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A . LowDepth;LowGQ END=65573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 69037 . G . LowDepth;LowGQ END=69610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 69611 . T . LowGQ END=69736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:1:0,0,31:0,0,31:3,0 chr1 69737 . T . PASS END=69746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 69747 . G . PASS END=69747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 69748 . C . PASS END=69786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 69787 . T . LowGQ END=69787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 69788 . T . PASS END=69806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 69807 . A . PASS END=69837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 69838 . A . PASS END=69872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:4,0 chr1 69873 . T . LowGQ END=69930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr1 69931 . A . PASS END=69967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 69968 . A G, 15.89 PASS DP=2;MQ=11.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,2,0:0,0,0:5:52,6,0,78,6,78:78,6,0:0,0:1.5891e+01,4.8911e+00,1.8717e+00,7.6402e+01,3.9661e+01,7.9402e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,0:0,0,2,0 chr1 69969 . G . LowGQ END=69995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:2:0,0,0:0,0,11:2,0 chr1 69996 . T . PASS END=70001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 70002 . G . LowGQ END=70002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 70003 . T . PASS END=70005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 70006 . T . PASS END=70006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 70007 . A . LowGQ END=70007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 70008 . G . PASS END=70008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:5,0 chr1 536778 . C . PASS END=536790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 536791 . T . PASS END=536799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr1 536800 . A . PASS END=536800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 536801 . C . PASS END=536801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr1 536802 . T . PASS END=536802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:20,0 chr1 536803 . C . PASS END=536807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 536808 . A . PASS END=536808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 536809 . G . PASS END=536809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 536810 . C . PASS END=536810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 536811 . G . PASS END=536812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 536813 . A . PASS END=536813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 536814 . G . PASS END=536818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 536819 . G . PASS END=536819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 536820 . T . PASS END=536820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:28,0 chr1 536821 . C . PASS END=536957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:84:30:0,84,1260:0,90,255:40,0 chr1 543335 . C . LowGQ END=543359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:0,0 chr1 543360 . T . LowDepth;LowGQ END=543399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 543400 . C . PASS END=543412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 543413 . T . LowGQ END=543413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:27,0,82:3,0 chr1 543414 . G . PASS END=543414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 543415 . T . LowGQ END=543415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,47:27,0,74:3,0 chr1 543416 . A . PASS END=543436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr1 544463 . C . PASS END=544586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,88,255:40,0 chr1 544587 . A . PASS END=544590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 544591 . T . PASS END=544592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 544593 . T . PASS END=544605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 544606 . G . PASS END=544615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:28,0 chr1 544616 . A . PASS END=544648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:26,0 chr1 544649 . C . PASS END=544653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 544654 . G . PASS END=544655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 544656 . A . PASS END=544656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:18,0 chr1 544657 . A . PASS END=544658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 544659 . G . PASS END=544674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,673:0,41,255:19,0 chr1 544675 . A . PASS END=544675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 544676 . G . PASS END=544678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 544679 . G . PASS END=544679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 544680 . G . PASS END=544680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 544681 . G . PASS END=544683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 544684 . T . PASS END=544686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 544687 . C . PASS END=544688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 544689 . C . PASS END=544692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:16,0 chr1 544693 . T . PASS END=544693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:14,0 chr1 544694 . T . PASS END=544699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 544700 . A . PASS END=544700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 544701 . G . PASS END=544706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 544707 . G . PASS END=544707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 544708 . A . PASS END=544708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 544709 . A . PASS END=544709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 544710 . C . PASS END=544711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 544712 . A . PASS END=544741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 544742 . C . PASS END=544742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 544743 . C . PASS END=544746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 544747 . A . PASS END=544792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:20:9:0,20,315:0,20,255:9,0 chr1 544793 . A . PASS END=544819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr1 544820 . C . LowGQ END=545007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,31:3,0 chr1 545008 . T . LowDepth;LowGQ END=545315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 545316 . G . LowDepth;LowGQ END=545532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr1 545533 . A . LowDepth;LowGQ END=545829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 545830 . C . LowDepth END=545887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 545888 . G . LowDepth;LowGQ END=545962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr1 545963 . G . LowDepth;LowGQ END=546130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:2,0 chr1 546492 . G . PASS END=546499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:6,0 chr1 546500 . C . PASS END=546506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 546507 . G . PASS END=546531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 546532 . G . PASS END=546570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,520:0,41,255:17,0 chr1 546571 . T . PASS END=546571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 546572 . G . PASS END=546586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,631:0,44,255:19,0 chr1 546587 . G . PASS END=546587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 546588 . T . PASS END=546588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 546589 . C . PASS END=546589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr1 546590 . C . PASS END=546591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 546592 . G . PASS END=546592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 546593 . T . PASS END=546593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr1 546594 . G . PASS END=546595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 546596 . C . PASS END=546596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 546597 . C . PASS END=546597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 546598 . G . PASS END=546598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr1 546599 . T . PASS END=546599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 546600 . A . PASS END=546600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 546601 . A . PASS END=546601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr1 546602 . G . PASS END=546605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 546606 . A . PASS END=546606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,767:0,22,255:21,0 chr1 546607 . C . PASS END=546610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 546611 . G . PASS END=546611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 546612 . A . PASS END=546613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 546614 . C . PASS END=546614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:21,0 chr1 546615 . G . PASS END=546615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 546616 . C . PASS END=546616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 546617 . T . PASS END=546620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr1 546621 . T . PASS END=546621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 546622 . C . PASS END=546622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr1 546623 . T . PASS END=546623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 546624 . T . PASS END=546625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 546626 . C . PASS END=546626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 546627 . G . PASS END=546628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 546629 . C . PASS END=546630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 546631 . A . PASS END=546631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,710:0,19,255:20,0 chr1 546632 . C . PASS END=546633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 546634 . A . PASS END=546634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 546635 . G . PASS END=546635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 546636 . G . PASS END=546636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 546637 . C . PASS END=546637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 546638 . C . PASS END=546638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 546639 . A . PASS END=546639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr1 546640 . G . PASS END=546643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 546644 . T . PASS END=546644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 546645 . G . PASS END=546649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 546650 . C . PASS END=546677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 621096 . T . LowDepth;LowGQ END=621781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 621782 . G . LowDepth END=621819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 621820 . C . LowDepth;LowGQ END=621909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr1 621910 . T . LowDepth;LowGQ END=622034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 858836 . T . PASS END=858838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 858839 . C . PASS END=858841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 858996 . C . PASS END=859027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,346:0,33,255:13,0 chr1 859028 . C . PASS END=859089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,559:0,41,255:19,0 chr1 859090 . C . PASS END=859104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 859105 . C . PASS END=859133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,782:0,50,255:19,0 chr1 859134 . T . PASS END=859134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr1 859135 . T . PASS END=859160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 859161 . T . PASS END=859161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:11,0 chr1 859162 . C . PASS END=859174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 859175 . G . PASS END=859182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 859183 . A . PASS END=859224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 859225 . T . LowDepth;LowGQ END=859366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 859367 . A . LowGQ END=859403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,53:0,0,61:3,0 chr1 859404 . C G, 57.00 PASS DP=3;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:7:94,9,0,116,9,116:116,9,0:0,0:5.6997e+01,6.9969e+00,9.6769e-01,1.1427e+02,4.1767e+01,1.1727e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,2:0,0,1,2 chr1 859405 . G . PASS END=859410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr1 859411 . G . PASS END=859418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr1 859419 . C . PASS END=859434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 859435 . T . PASS END=859441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 859442 . C . PASS END=859443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 859444 . C . PASS END=859469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,197:0,21,197:8,0 chr1 859470 . G . PASS END=859470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 859471 . G . PASS END=859471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 859472 . G . PASS END=859473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 859474 . G . LowGQ END=859476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 859477 . G . PASS END=859477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 859478 . G . PASS END=859479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:11,0 chr1 859480 . C . PASS END=859482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 859483 . C . PASS END=859512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 859513 . C . PASS END=859525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 859526 . G . PASS END=859551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr1 859552 . A . PASS END=859552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 859553 . C . PASS END=859553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 859554 . T . PASS END=859560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,549:0,32,255:13,0 chr1 859561 . C . PASS END=859562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 859563 . C . PASS END=859563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 859564 . G . PASS END=859577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 859578 . G . PASS END=859579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 859580 . A . PASS END=859584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 859585 . T . PASS END=859586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 859587 . G . PASS END=859588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 859589 . A . PASS END=859596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 859597 . G . PASS END=859597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 859598 . T . PASS END=859619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,474:0,36,255:13,0 chr1 859620 . C . PASS END=859631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,315:0,20,255:8,0 chr1 859632 . C . PASS END=859645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:6:0,12,180:0,18,188:6,0 chr1 859646 . C . PASS END=859646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 859647 . T . PASS END=859650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr1 859651 . G . PASS END=859651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr1 859652 . G . LowGQ END=859652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 859653 . G . PASS END=859653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 859654 . C . PASS END=859679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,86:0,9,86:3,0 chr1 859680 . C . PASS END=859681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 859682 . G . LowGQ END=859689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:4:0,0,90:0,0,140:3,0 chr1 859690 . C G, 62.31 PASS DP=5;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,2,0:0,3,0:12:100,15,0,186,15,186:186,15,0:0,0:6.2309e+01,1.2309e+01,2.6313e-01,1.8303e+02,4.7079e+01,1.8603e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,3:0,0,1,4 chr1 859691 . T . PASS END=859691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 859692 . A . PASS END=859697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:4,0 chr1 859698 . C . PASS END=859698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 859699 . G . PASS END=859700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:6,0 chr1 859701 . C G, 68.13 PASS DP=7;MQ=245.56;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,2,0:0,5,0:18:106,21,0,258,21,258:247,21,0:0,0:6.8131e+01,1.8131e+01,6.7323e-02,2.5517e+02,5.2901e+01,2.5817e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,3:0,0,5,2 chr1 859702 . G . PASS END=859712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr1 859713 . G . PASS END=859740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 859741 . C . PASS END=859746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 859747 . C . PASS END=859747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 859748 . A . PASS END=859761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 859762 . T . PASS END=859762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 859763 . A . PASS END=859791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,250:0,24,250:9,0 chr1 859792 . T . PASS END=859792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 859793 . G . PASS END=859828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 859829 . G . PASS END=859829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 859830 . G . PASS END=859841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 859842 . C . PASS END=859852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 859853 . G . PASS END=859853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 859854 . G . PASS END=859863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 859864 . T . PASS END=859875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 859876 . A . PASS END=859876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 859877 . C . PASS END=859908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr1 859909 . T . PASS END=859912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:4:0,9,135:0,12,133:3,0 chr1 859913 . A G, 62.31 PASS DP=5;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:100,15,0,194,15,194:186,15,0:0,0:6.2312e+01,1.2312e+01,2.6294e-01,1.9111e+02,4.7082e+01,1.9411e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,4:0,0,2,3 chr1 859914 . G . PASS END=859980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,16:0,3,16:3,0 chr1 859981 . C . PASS END=859989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,111:0,12,111:6,0 chr1 859990 . A . PASS END=859994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 859995 . C . PASS END=860003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 860004 . C . PASS END=860004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 860005 . C . PASS END=860018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr1 860019 . C . PASS END=860019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 860020 . C . PASS END=860043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 860044 . A . PASS END=860044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 860045 . G . PASS END=860045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 860046 . G . PASS END=860064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:25,0 chr1 860065 . T . PASS END=860065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 860066 . G . PASS END=860069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 860070 . A . PASS END=860111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:22:0,61,800:0,61,255:26,0 chr1 860112 . G . PASS END=860112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 860113 . C . PASS END=860127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,770:0,66,255:22,0 chr1 860128 . A . PASS END=860128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 860129 . G . PASS END=860129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 860130 . C . PASS END=860132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 860133 . C . PASS END=860133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 860134 . T . PASS END=860134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:19,0 chr1 860135 . G . PASS END=860139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 860140 . A . PASS END=860140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 860141 . C . PASS END=860142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:20,0 chr1 860143 . A . PASS END=860143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 860144 . C . PASS END=860148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 860149 . A . PASS END=860154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 860155 . G . PASS END=860157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 860158 . T . PASS END=860162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 860163 . G . PASS END=860163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 860164 . T . PASS END=860164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 860165 . G . PASS END=860210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 860211 . C . PASS END=860212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 860213 . G . PASS END=860214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 860215 . G . PASS END=860215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 860216 . C . PASS END=860216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 860217 . A . PASS END=860217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 860218 . G . PASS END=860255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,817:0,69,255:23,0 chr1 860256 . A . PASS END=860256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 860257 . C . PASS END=860259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 860260 . C . PASS END=860260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 860261 . C . PASS END=860271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 860272 . A . PASS END=860272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 860273 . G . PASS END=860273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 860274 . T . PASS END=860274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:19,0 chr1 860275 . T . PASS END=860278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 860279 . C . PASS END=860283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 860284 . G . PASS END=860289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 860290 . A . PASS END=860292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 860293 . C . PASS END=860296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 860297 . C . PASS END=860304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 860305 . G . PASS END=860305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 860306 . G . PASS END=860306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 860307 . A . PASS END=860318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 860319 . C . PASS END=860324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 860325 . A . PASS END=860325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,629:0,30,255:16,0 chr1 860326 . A . PASS END=860328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 861302 . G . PASS END=861312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,914:0,69,255:24,0 chr1 861313 . A . PASS END=861313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 861314 . A . PASS END=861323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,854:0,72,255:26,0 chr1 861324 . G . PASS END=861362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1041:0,80,255:38,0 chr1 861363 . C . PASS END=861363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:34,0 chr1 861364 . T . PASS END=861393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1310:0,92,255:37,0 chr1 865535 . A . PASS END=865536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,817:0,72,255:24,0 chr1 865537 . C . PASS END=865537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 865538 . C . PASS END=865540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 865541 . G . PASS END=865541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 865542 . G . PASS END=865543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 865544 . C . PASS END=865544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 865545 . G . PASS END=865546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 865547 . C . PASS END=865547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 865548 . T . PASS END=865551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 865552 . A . PASS END=865552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 865553 . G . PASS END=865576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:26,0 chr1 865577 . G . PASS END=865577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:23,0 chr1 865578 . C . PASS END=865587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr1 865588 . C . PASS END=865595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 865596 . A . PASS END=865597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 865598 . G . PASS END=865603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 865604 . A . PASS END=865604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 865605 . C . PASS END=865612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 865613 . T . PASS END=865613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:26,0 chr1 865614 . T . PASS END=865614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 865615 . C . PASS END=865615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 865616 . T . PASS END=865616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,937:0,29,255:26,0 chr1 865617 . C . PASS END=865667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,930:0,62,255:26,0 chr1 865668 . C . PASS END=865712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 865713 . G . PASS END=865713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 865714 . A . PASS END=865714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 865715 . A . PASS END=865716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 866419 . A . PASS END=866464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1415:0,104,255:40,0 chr1 866465 . T . PASS END=866469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,108,1620:0,120,255:37,0 chr1 871152 . C . PASS END=871155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:19,0 chr1 871156 . G . PASS END=871167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:22,0 chr1 871168 . C . PASS END=871168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 871169 . C . PASS END=871179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:22:0,65,770:0,65,255:26,0 chr1 871180 . T . PASS END=871182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 871183 . A . PASS END=871183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 871184 . G . PASS END=871188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 871189 . C . PASS END=871193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1008:0,68,255:26,0 chr1 871194 . C . PASS END=871198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 871199 . G . PASS END=871205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 871206 . C . PASS END=871207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 871208 . T . PASS END=871218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1045:0,71,255:26,0 chr1 871219 . C . PASS END=871222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 871223 . A . PASS END=871224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 871225 . A . PASS END=871228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 871229 . G . PASS END=871231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 871232 . G . PASS END=871232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 871233 . T . PASS END=871235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 871236 . A . PASS END=871240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 871241 . A . PASS END=871257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,961:0,65,255:26,0 chr1 871258 . A . PASS END=871258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,856:0,47,255:22,0 chr1 871259 . T . PASS END=871276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:23,0 chr1 874420 . G . PASS END=874422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 874423 . A . PASS END=874423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 874424 . C . PASS END=874424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 874425 . C . PASS END=874428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 874429 . T . PASS END=874429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 874430 . G . PASS END=874443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 874444 . G . PASS END=874445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 874446 . C . PASS END=874446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 874447 . G . PASS END=874447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 874448 . C . PASS END=874450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr1 874451 . C . PASS END=874451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 874452 . C . PASS END=874452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 874453 . C . PASS END=874453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 874454 . C . PASS END=874454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 874455 . C . PASS END=874455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 874456 . G . PASS END=874460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr1 874461 . A . PASS END=874509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,945:0,75,255:26,0 chr1 874652 . C . PASS END=874654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr1 874655 . A . PASS END=874655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:22,0 chr1 874656 . G . PASS END=874677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,921:0,62,255:26,0 chr1 874678 . C . PASS END=874678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 874679 . T . PASS END=874685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 874686 . C . PASS END=874686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 874687 . A . PASS END=874689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 874690 . A . PASS END=874690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 874691 . T . PASS END=874691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 874692 . G . PASS END=874692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 874693 . G . PASS END=874707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1008:0,68,255:26,0 chr1 874708 . T . PASS END=874709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 874710 . C . PASS END=874710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 874711 . C . PASS END=874717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 874718 . T . PASS END=874753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,67,255:26,0 chr1 874754 . A . PASS END=874754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 874755 . C . PASS END=874771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 874772 . A . PASS END=874811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,584:0,40,255:19,0 chr1 874812 . T . PASS END=874812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 874813 . G . PASS END=874813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 874814 . A . PASS END=874814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 874815 . T . PASS END=874832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr1 874833 . C . PASS END=874840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 876524 . A . PASS END=876528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr1 876529 . C . PASS END=876529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 876530 . T . PASS END=876536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 876537 . C . PASS END=876538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 876539 . G . PASS END=876544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 876545 . A . PASS END=876545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:13,0 chr1 876546 . G . PASS END=876557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 876558 . A . PASS END=876559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,480:0,26,255:14,0 chr1 876560 . C . PASS END=876563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 876564 . G . PASS END=876564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 876565 . A . PASS END=876572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:17:0,47,720:0,47,255:19,0 chr1 876573 . C . PASS END=876573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,610:0,10,255:17,0 chr1 876574 . A . PASS END=876575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 876576 . T . PASS END=876577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 876578 . G . PASS END=876583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 876584 . A . PASS END=876596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr1 876597 . C . PASS END=876610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:25,0 chr1 876611 . G . PASS END=876611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 876612 . T . PASS END=876614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr1 876615 . G . PASS END=876615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 876616 . C . PASS END=876625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 876626 . A . PASS END=876626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 876627 . G . PASS END=876633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 876634 . G . PASS END=876636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 876637 . C . PASS END=876642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 876643 . C . PASS END=876643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:24,0 chr1 876644 . G . PASS END=876655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 876656 . C . PASS END=876657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 876658 . C . PASS END=876658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 876659 . C . PASS END=876659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 876660 . A . PASS END=876676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,872:0,62,255:26,0 chr1 876677 . T . PASS END=876677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:22,0 chr1 876678 . C . PASS END=876678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 876679 . T . PASS END=876680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 876681 . G . PASS END=876681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 876682 . G . PASS END=876684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 876685 . A . PASS END=876685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 876686 . G . PASS END=876687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 877516 . G . PASS END=877527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr1 877528 . G . PASS END=877528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 877529 . C . PASS END=877534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 877535 . C . PASS END=877572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 877573 . G . PASS END=877573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 877574 . G . PASS END=877614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 877615 . T . PASS END=877615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 877616 . C . PASS END=877631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 877790 . G . PASS END=877790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr1 877791 . C . PASS END=877791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 877792 . T . LowGQ END=877792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:6,0 chr1 877793 . A . PASS END=877793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 877794 . C . PASS END=877794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,250:7,0 chr1 877795 . G . PASS END=877795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 877796 . G . PASS END=877801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,235:7,0 chr1 877802 . T . LowGQ END=877803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,164:0,0,173:6,0 chr1 877804 . C . PASS END=877809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 877810 . G . LowGQ END=877811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,139:0,0,151:6,0 chr1 877812 . G . PASS END=877813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,182:0,21,182:7,0 chr1 877814 . A . PASS END=877814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 877815 . G . PASS END=877818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 877819 . G . LowGQ END=877820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,124:0,0,151:6,0 chr1 877821 . G . PASS END=877822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,243:0,21,243:8,0 chr1 877823 . T . PASS END=877823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 877824 . G . PASS END=877826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:8,0 chr1 877827 . C . PASS END=877827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 877828 . G . PASS END=877830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 877831 . T C, 74.10 PASS DP=9;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,6,0:0,3,0:24:112,27,0,338,27,338:255,30,0:0,0:7.4100e+01,2.4100e+01,1.6934e-02,3.3466e+02,5.8870e+01,3.3766e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,6:0,0,4,5 chr1 877832 . G . PASS END=877834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 877835 . A . LowGQ END=877835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,261:3,0,255:8,0 chr1 877836 . G . PASS END=877836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 877837 . C . LowGQ END=877837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:8,0 chr1 877838 . A . PASS END=877838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 877839 . G . PASS END=877839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:9,0 chr1 877840 . G . PASS END=877841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 877842 . G . PASS END=877842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 877843 . C . PASS END=877844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 877845 . C . PASS END=877845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 877846 . C . PASS END=877846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,246:0,30,246:10,0 chr1 877847 . T . PASS END=877847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,213:0,13,213:9,0 chr1 877848 . G . PASS END=877849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 877850 . G . PASS END=877851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 877852 . A . PASS END=877852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 877853 . A . PASS END=877853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:6,0 chr1 877854 . G . PASS END=877855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 877856 . A . PASS END=877856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:5,0 chr1 877857 . G . LowGQ END=877857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:5,0 chr1 877858 . A . PASS END=877865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:13:10:0,13,243:0,13,243:6,0 chr1 877866 . C . LowGQ END=877868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,180:0,0,195:6,0 chr1 877939 . G . PASS END=877946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 877947 . T . PASS END=877947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 877948 . G . PASS END=877969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 877970 . A . PASS END=877982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:3:0,9,108:0,9,108:3,0 chr1 877983 . G . PASS END=877991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 877992 . C . LowGQ END=878075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,55:0,0,55:3,0 chr1 878076 . A . PASS END=878102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 878103 . T . LowGQ END=878103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 878104 . G . PASS END=878123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 878124 . G . PASS END=878148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,258:0,24,255:9,0 chr1 878149 . G . PASS END=878174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:12,0 chr1 878175 . A . PASS END=878175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 878176 . G . PASS END=878198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 878199 . C . PASS END=878209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 878210 . G . PASS END=878210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 878211 . A . PASS END=878211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 878212 . G . PASS END=878212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 878213 . T . PASS END=878214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 878215 . C . PASS END=878222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,557:0,32,255:14,0 chr1 878223 . T . PASS END=878224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 878225 . A . PASS END=878225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 878226 . C . PASS END=878228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 878229 . G . PASS END=878297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,410:0,33,255:13,0 chr1 878298 . A . PASS END=878298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 878299 . G . PASS END=878299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,433:0,36,255:12,0 chr1 878300 . A . PASS END=878300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 878301 . C . PASS END=878310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 878311 . T . PASS END=878312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 878313 . G . PASS END=878314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 878315 . T . PASS END=878315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 878316 . G . PASS END=878330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 878331 . C . PASS END=878336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 878337 . A . PASS END=878343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 878344 . A . PASS END=878344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 878345 . G . PASS END=878345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 878346 . C . PASS END=878347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 878348 . G . PASS END=878348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 878349 . G . PASS END=878350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 878351 . G . PASS END=878352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 878353 . G . PASS END=878382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 878383 . A . PASS END=878385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,37,255:14,0 chr1 878386 . G . PASS END=878416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:16,0 chr1 878417 . G . PASS END=878432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 878433 . A . PASS END=878433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 878434 . C . PASS END=878438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 878630 . C . PASS END=878630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 878633 . G . PASS END=878646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 878647 . C . PASS END=878657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 878658 . T . PASS END=878658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:7,0 chr1 878659 . G . PASS END=878690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:9,0 chr1 878691 . C . PASS END=878698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 878699 . C . PASS END=878703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 878704 . G . PASS END=878704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 878705 . A . PASS END=878705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 878706 . T . PASS END=878707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 878708 . A . PASS END=878708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 878709 . C . PASS END=878733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 878734 . T . PASS END=878734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 878735 . C . PASS END=878743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 878744 . G . PASS END=878745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 878746 . G . PASS END=878746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 878747 . A . PASS END=878753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 878754 . T . PASS END=878757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 879078 . G . PASS END=879120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,768:0,63,255:26,0 chr1 879121 . T . PASS END=879131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,995:0,84,255:29,0 chr1 879132 . C . PASS END=879139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 879140 . G . PASS END=879141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 879142 . C . PASS END=879144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:25,0 chr1 879145 . A . PASS END=879145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 879146 . C . PASS END=879159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr1 879160 . T . PASS END=879160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 879161 . G . PASS END=879164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 879165 . C . PASS END=879165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 879166 . C . PASS END=879174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr1 879175 . A . PASS END=879179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,895:0,81,255:27,0 chr1 879180 . C . PASS END=879190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 879191 . G . PASS END=879193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 879194 . A . PASS END=879194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:28,0 chr1 879195 . C . PASS END=879202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 879203 . A . PASS END=879203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 879204 . G . PASS END=879205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 879206 . G . PASS END=879208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 879209 . G . PASS END=879225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 879226 . A . PASS END=879226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 879227 . C . PASS END=879232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 879233 . G . PASS END=879246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 879247 . G . PASS END=879247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 879248 . G . PASS END=879248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 879249 . T . PASS END=879249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 879250 . G . PASS END=879251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:22,0 chr1 879252 . G . PASS END=879257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 879258 . G . PASS END=879276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,900:0,72,255:26,0 chr1 879277 . T . PASS END=879277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr1 879278 . C . PASS END=879283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 879284 . G . PASS END=879290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,63,255:18,0 chr1 879291 . G . PASS END=879291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 879292 . C . PASS END=879316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 879317 . C . PASS END=879325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 879326 . C . PASS END=879326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 879327 . T . PASS END=879341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 879342 . C . PASS END=879346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 879347 . G . PASS END=879371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:13,0 chr1 879372 . G . PASS END=879372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 879373 . A . PASS END=879378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 879379 . A . PASS END=879379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 879380 . A . PASS END=879389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 879390 . G . PASS END=879390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 879391 . G . PASS END=879418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:14:6:0,14,225:0,14,225:6,0 chr1 879419 . C . PASS END=879424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:8,0 chr1 879425 . C . PASS END=879435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr1 879436 . G . PASS END=879437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 879438 . G . PASS END=879446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 879447 . C . PASS END=879460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 879461 . T . PASS END=879461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 879462 . T . PASS END=879477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 879478 . A . PASS END=879478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 879479 . T . PASS END=879480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 879481 . G . PASS END=879484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 879485 . C . PASS END=879485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 879486 . T . PASS END=879498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 879499 . C . PASS END=879499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 879500 . A . PASS END=879510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 879511 . A . PASS END=879523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 879524 . T . LowGQ END=879524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:4,0,255:8,0 chr1 879525 . C . PASS END=879533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,296:0,24,255:9,0 chr1 880074 . T . PASS END=880076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 880077 . G . PASS END=880089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 880090 . A . PASS END=880090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:19,0 chr1 880091 . G . PASS END=880110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,892:0,66,255:23,0 chr1 880111 . T . PASS END=880111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 880112 . C . PASS END=880140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,61,255:23,0 chr1 880141 . T . PASS END=880141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,717:0,55,255:19,0 chr1 880142 . C . PASS END=880165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 880166 . C . PASS END=880166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 880167 . G . PASS END=880180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 880437 . C . PASS END=880526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,105,1800:0,105,255:40,0 chr1 880898 . C . PASS END=880981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:37:0,86,1337:0,86,255:40,0 chr1 880982 . T . PASS END=880982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1551:0,58,255:40,0 chr1 880983 . C . PASS END=880988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:43:0,90,1448:0,90,255:40,0 chr1 880989 . A . PASS END=880989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:38,0 chr1 880990 . G . PASS END=881001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1361:0,82,255:38,0 chr1 881002 . C . PASS END=881002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:35,0 chr1 881003 . G . PASS END=881003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 881004 . T . PASS END=881004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1075:0,45,255:33,0 chr1 881005 . T . PASS END=881007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1283:0,78,255:35,0 chr1 881008 . A . PASS END=881008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 881009 . T . PASS END=881009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:32,0 chr1 881010 . C . PASS END=881011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:30,0 chr1 881012 . C . PASS END=881012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:30,0 chr1 881013 . A . PASS END=881015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:39:0,90,1350:0,100,255:30,0 chr1 881016 . G . PASS END=881017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1296:0,72,255:30,0 chr1 881018 . A . PASS END=881018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 881019 . G . PASS END=881021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:28,0 chr1 881022 . C . PASS END=881024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1131:0,57,255:28,0 chr1 881025 . G . PASS END=881026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 881027 . C . PASS END=881027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr1 881028 . T . PASS END=881028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 881029 . T . PASS END=881029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 881030 . C . PASS END=881030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:27,0 chr1 881031 . C . PASS END=881031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 881032 . A . PASS END=881033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:27,0 chr1 881553 . C . PASS END=881559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,639:0,54,255:19,0 chr1 881560 . T . PASS END=881578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:24,0 chr1 881579 . G . PASS END=881579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 881580 . G . PASS END=881580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 881581 . A . PASS END=881581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 881582 . T . PASS END=881587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 881588 . G . PASS END=881588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 881589 . G . PASS END=881589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 881590 . T . PASS END=881597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,856:0,72,255:24,0 chr1 881598 . C . PASS END=881599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 881600 . T . PASS END=881608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 881609 . G . PASS END=881609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 881610 . G . PASS END=881611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 881612 . T . PASS END=881626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,681:0,41,255:19,0 chr1 881627 . G A, 103.72 PASS DP=19;MQ=238.07;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:141,57,0,691,57,691:255,57,0:0,0:1.0372e+02,5.3723e+01,1.8379e-05,4.5000e+02,8.8493e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,8:0,0,8,11 chr1 881628 . G . PASS END=881636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 881637 . C . PASS END=881646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 881647 . G . PASS END=881647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 881648 . T . PASS END=881651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 881652 . C . PASS END=881664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 881665 . T . PASS END=881666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 881782 . C . PASS END=881782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 881783 . A . PASS END=881783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 881784 . C . PASS END=881792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 881793 . G . PASS END=881793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 881794 . C . PASS END=881798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 881799 . A . PASS END=881799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 881800 . G . PASS END=881832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 881833 . G . PASS END=881834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 881835 . T . PASS END=881835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 881836 . G . PASS END=881837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 881838 . A . PASS END=881838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 881839 . T . PASS END=881847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 881848 . C . PASS END=881866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 881867 . A . PASS END=881868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 881869 . C . PASS END=881869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:15,0 chr1 881870 . T . PASS END=881878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,47,255:16,0 chr1 881879 . T . PASS END=881879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 881880 . G . PASS END=881885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 881886 . A . PASS END=881886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 881887 . G . PASS END=881896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 881897 . A . PASS END=881899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 881900 . T . PASS END=881902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 881903 . C . PASS END=881922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,365:0,30,255:13,0 chr1 881923 . C . PASS END=881925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 883511 . C . PASS END=883511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 883512 . T . PASS END=883512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 883513 . G . PASS END=883551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1157:0,87,255:32,0 chr1 883552 . A . PASS END=883552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 883553 . G . PASS END=883587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1156:0,83,255:32,0 chr1 883588 . C . PASS END=883600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:30,0 chr1 883601 . C . PASS END=883612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 883870 . C . PASS END=883872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 883873 . G . PASS END=883874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 883875 . A . PASS END=883877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 883878 . C . PASS END=883885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 883886 . T . PASS END=883886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 883887 . G . PASS END=883940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1056:0,80,255:32,0 chr1 883941 . T . PASS END=883941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 883942 . C . PASS END=883983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:32,0 chr1 886507 . C . PASS END=886531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:18:0,46,668:0,46,255:20,0 chr1 886532 . A . PASS END=886549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,807:0,66,255:26,0 chr1 886550 . C . PASS END=886556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 886557 . G . PASS END=886557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 886558 . C . PASS END=886576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:30,0 chr1 886577 . C . PASS END=886577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 886578 . A . PASS END=886586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:32,0 chr1 886587 . G . PASS END=886587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:31,0 chr1 886588 . C . PASS END=886595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 886596 . A . PASS END=886596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:27,0 chr1 886597 . G . PASS END=886598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1153:0,80,255:28,0 chr1 886599 . A . PASS END=886599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 886600 . G . PASS END=886604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 886605 . C . PASS END=886618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,74,255:26,0 chr1 887380 . T . PASS END=887384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 887385 . A . PASS END=887385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 887386 . C . PASS END=887404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,793:0,72,255:26,0 chr1 887405 . C . PASS END=887459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,980:0,81,255:35,0 chr1 887460 . C . PASS END=887460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 887461 . C . PASS END=887466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 887467 . C . PASS END=887490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 887491 . T . PASS END=887491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 887492 . G . PASS END=887492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 887493 . C . PASS END=887506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:18:0,51,765:0,54,255:18,0 chr1 887507 . A . PASS END=887507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 887508 . C . PASS END=887519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,582:0,45,255:15,0 chr1 887792 . C . PASS END=887800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,698:0,51,255:18,0 chr1 887801 . A G, 101.18 PASS DP=18;MQ=203.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,9,0:0,9,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,7:0,0,14,4 chr1 887802 . G . PASS END=887813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 887814 . T . PASS END=887818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 887819 . C . PASS END=887820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 887821 . G . PASS END=887833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,908:0,69,255:24,0 chr1 887834 . C . PASS END=887834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 887835 . T . PASS END=887838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 887839 . G . PASS END=887851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,986:0,72,255:26,0 chr1 887852 . G . PASS END=887860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 887861 . G . PASS END=887871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 887872 . C . PASS END=887872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,953:0,29,255:24,0 chr1 887873 . C . PASS END=887876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 887877 . T . PASS END=887881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 887882 . G . PASS END=887882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 887883 . G . PASS END=887887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 887888 . C . PASS END=887889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 887890 . G . PASS END=887930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1089:0,85,255:33,0 chr1 887931 . G . PASS END=887931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,931:0,35,255:27,0 chr1 887932 . C . PASS END=887942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1149:0,93,255:31,0 chr1 887943 . G . PASS END=887943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr1 887944 . T . PASS END=887948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 887949 . T . PASS END=887949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 887950 . T . PASS END=887966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1149:0,93,255:31,0 chr1 887967 . G . PASS END=887976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 887977 . T . PASS END=887977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,818:0,53,255:24,0 chr1 887978 . T . PASS END=887980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 888555 . C . PASS END=888601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,119,1659:0,119,255:40,0 chr1 888602 . T . PASS END=888638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:42:0,96,1485:0,96,255:40,0 chr1 888639 . T C, 170.39 PASS DP=41;MQ=204.47;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,24,0:0,17,0:120:208,123,0,308,308,308:255,126,0:0,0:1.7039e+02,1.2039e+02,0.0000e+00,3.0516e+02,3.3993e+02,3.0817e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,28:0,0,20,21 chr1 888640 . T . PASS END=888656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,102,255:34,0 chr1 888657 . G . PASS END=888658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:24,0 chr1 888659 . T C, 146.31 PASS DP=33;MQ=194.94;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,20,0:0,13,0:96:184,99,0,1254,99,1254:255,102,0:0,0:1.4631e+02,9.6314e+01,0.0000e+00,4.5000e+02,1.3108e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,20:0,0,20,13 chr1 888660 . C . PASS END=888660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:24,0 chr1 888661 . A . PASS END=888668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:24,0 chr1 889162 . C . PASS END=889179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:19,0 chr1 889180 . C . PASS END=889190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr1 889191 . A . PASS END=889191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 889192 . G . PASS END=889198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 889199 . A . PASS END=889199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 889200 . A . PASS END=889201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 889202 . C . PASS END=889208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,945:0,62,255:26,0 chr1 889209 . C . PASS END=889212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 889213 . C . PASS END=889260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,955:0,72,255:26,0 chr1 889261 . A . PASS END=889261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 889262 . C . PASS END=889268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 889269 . C . PASS END=889272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 889384 . C . PASS END=889451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1070:0,84,255:33,0 chr1 889452 . G . PASS END=889462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,911:0,67,255:26,0 chr1 891303 . C . PASS END=891303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 891304 . T . PASS END=891304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,897:0,46,255:29,0 chr1 891305 . G . PASS END=891305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,995:0,63,255:30,0 chr1 891306 . C . PASS END=891306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:36,0 chr1 891307 . T . PASS END=891307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1211:0,64,255:35,0 chr1 891308 . G . PASS END=891309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1230:0,94,255:36,0 chr1 891310 . T . PASS END=891310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1130:0,55,255:35,0 chr1 891311 . A . PASS END=891311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1282:0,94,255:36,0 chr1 891312 . T . PASS END=891312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1194:0,39,255:34,0 chr1 891313 . C . PASS END=891320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1200:0,81,255:38,0 chr1 891321 . A . PASS END=891321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1253:0,50,255:34,0 chr1 891322 . C . PASS END=891323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 891324 . T . LowGQ END=891324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:0:39:0,0,1027:25,0,255:33,0 chr1 891325 . T . PASS END=891333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1294:0,84,255:40,0 chr1 891334 . G . PASS END=891334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:42:42:0,42,1045:0,42,255:37,0 chr1 891335 . C . PASS END=891336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1444:0,93,255:40,0 chr1 891337 . G . PASS END=891337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1338:0,70,255:40,0 chr1 891338 . C . PASS END=891339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,109,1430:0,109,255:40,0 chr1 891340 . T . PASS END=891340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1336:0,60,255:40,0 chr1 891341 . C . PASS END=891346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,99,1434:0,99,255:40,0 chr1 891347 . A . PASS END=891347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:51:44:0,51,1351:0,51,255:39,0 chr1 891348 . C . PASS END=891349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 891350 . G . PASS END=891351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1385:0,76,255:40,0 chr1 891352 . C . PASS END=891354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:96:44:0,96,1396:0,96,255:40,0 chr1 891355 . T . PASS END=891355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1415:0,63,255:40,0 chr1 891356 . G . PASS END=891359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,102,1473:0,102,255:40,0 chr1 891360 . T . PASS END=891360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1455:0,72,255:38,0 chr1 891361 . C . PASS END=891361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,115,1553:0,115,255:39,0 chr1 891362 . T . PASS END=891362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1452:0,77,255:38,0 chr1 891363 . C . PASS END=891363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr1 891364 . T . PASS END=891364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:50:46:0,50,1471:0,50,255:38,0 chr1 891365 . G . PASS END=891393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:45:0,88,1519:0,88,255:40,0 chr1 891475 . C . PASS END=891574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:33:0,86,1305:0,86,255:40,0 chr1 891575 . C . PASS END=891577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 891578 . C . PASS END=891585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:28,0 chr1 891586 . T . PASS END=891587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1053:0,71,255:28,0 chr1 891588 . A . PASS END=891593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr1 891594 . T . PASS END=891594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 891595 . G . PASS END=891595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 892274 . C . PASS END=892281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 892282 . C . PASS END=892291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 892292 . T . PASS END=892293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 892294 . T . PASS END=892294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 892295 . C . PASS END=892296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 892297 . C . PASS END=892317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 892318 . G . PASS END=892321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 892322 . A . PASS END=892327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,901:0,64,255:26,0 chr1 892328 . C . PASS END=892329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 892330 . T . PASS END=892330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,928:0,51,255:27,0 chr1 892331 . C . PASS END=892331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 892332 . T . PASS END=892332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:27,0 chr1 892333 . T . PASS END=892333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 892334 . C . PASS END=892335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr1 892336 . C . PASS END=892336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 892337 . C . PASS END=892345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 892346 . T . PASS END=892346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:29,0 chr1 892347 . C . PASS END=892405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1174:0,85,255:35,0 chr1 892479 . C . PASS END=892639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:34:0,88,1395:0,88,255:40,0 chr1 892640 . G . PASS END=892640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 892641 . G . PASS END=892647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 892648 . C . PASS END=892653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:67:27:0,67,986:0,67,255:26,0 chr1 894309 . C . PASS END=894309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 894310 . T . PASS END=894311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 894312 . G . PASS END=894312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 894313 . C . PASS END=894314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 894315 . G . PASS END=894315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 894316 . A . PASS END=894316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 894317 . G . PASS END=894317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr1 894318 . G . PASS END=894318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 894319 . G . PASS END=894319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 894320 . G . PASS END=894320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 894321 . C . PASS END=894322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 894323 . C . PASS END=894323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 894324 . C . PASS END=894325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 894326 . G . PASS END=894326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 894327 . C . PASS END=894329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 894330 . G . PASS END=894331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:28,0 chr1 894332 . C . PASS END=894333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 894334 . T . PASS END=894343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr1 894344 . C . PASS END=894344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 894345 . C . PASS END=894429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1133:0,80,255:37,0 chr1 894430 . G . PASS END=894442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:26,0 chr1 894443 . C . PASS END=894443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:21,0 chr1 894444 . G . PASS END=894444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 894445 . T . PASS END=894445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,828:0,28,255:19,0 chr1 894446 . C . PASS END=894449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 894450 . T . PASS END=894450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 894451 . C . PASS END=894455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 894456 . A . PASS END=894456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 894457 . G . PASS END=894461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,776:0,66,255:22,0 chr1 894595 . C . PASS END=894610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 894611 . C . PASS END=894614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:29,0 chr1 894615 . T . PASS END=894615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:27,0 chr1 894616 . G . PASS END=894618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 894619 . A . PASS END=894619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 894620 . T . PASS END=894620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 896074 . A . PASS END=896110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 896111 . A . LowGQ END=896132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,0:5:0:1:0,0,0:0,3,39:1,0 chr1 896133 . G . LowDepth;LowGQ END=896180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 896673 . C . PASS END=896702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 896703 . G . PASS END=896706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 896707 . C . PASS END=896707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 896708 . G . PASS END=896711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr1 896712 . C . PASS END=896712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 896713 . G . PASS END=896717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:11,0 chr1 896718 . C . PASS END=896718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 896719 . C . PASS END=896721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 896722 . A . LowGQ END=896722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,365:35,0,255:12,0 chr1 896723 . T . PASS END=896725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,444:0,42,255:16,0 chr1 896726 . A . PASS END=896726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,488:0,1,255:14,0 chr1 896727 . G . PASS END=896728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 896729 . G . PASS END=896730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr1 896731 . G . PASS END=896731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 896732 . C . PASS END=896732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 896733 . C . LowGQ END=896733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:15,0 chr1 896734 . G . PASS END=896737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 896738 . A . PASS END=896738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 896739 . G . PASS END=896739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 896740 . C . PASS END=896740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:14,0 chr1 896741 . T . PASS END=896741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 896742 . G . PASS END=896742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 896743 . C . PASS END=896743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,526:0,4,255:14,0 chr1 896744 . T . PASS END=896745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 896746 . A . PASS END=896746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 896747 . G . PASS END=896748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 896749 . C . PASS END=896749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 896750 . G . PASS END=896750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 896751 . C . PASS END=896751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 896752 . G . PASS END=896752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 896753 . A . PASS END=896754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr1 896755 . G . PASS END=896757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 896758 . C . PASS END=896758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 896759 . A . PASS END=896760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 896761 . A . PASS END=896761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 896762 . G . PASS END=896762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 896763 . C . PASS END=896763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,504:0,4,255:13,0 chr1 896764 . G . PASS END=896764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 896765 . T . PASS END=896765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 896766 . G . PASS END=896779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 896780 . A . PASS END=896803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 896804 . T . PASS END=896804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 896805 . G . PASS END=896805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 896806 . G . PASS END=896811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 896812 . A . PASS END=896813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 896814 . C . PASS END=896814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr1 896815 . C . PASS END=896818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 896819 . T . PASS END=896821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 896822 . G . PASS END=896822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 896823 . C . PASS END=896843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 896844 . C . PASS END=896845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 896846 . T . PASS END=896866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:12,0 chr1 896867 . A . PASS END=896867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 896868 . G . PASS END=896877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr1 896878 . G . PASS END=896878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 896879 . C . PASS END=896881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 896882 . A . PASS END=896882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 896883 . C . PASS END=896884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 896885 . A . PASS END=896886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 896887 . G . PASS END=896887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 896888 . T . PASS END=896904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 896905 . A . PASS END=896905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 896906 . G . PASS END=896924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:15,0 chr1 896925 . G . PASS END=896932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:12,0 chr1 897009 . A . PASS END=897014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 897015 . T . PASS END=897015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 897016 . G . PASS END=897017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 897018 . G . PASS END=897018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,454:0,31,255:15,0 chr1 897019 . C . PASS END=897035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 897036 . A . PASS END=897036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 897037 . C . PASS END=897083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,607:0,48,255:18,0 chr1 897084 . A . PASS END=897084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 897085 . G . PASS END=897085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 897086 . T . PASS END=897086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:14,0 chr1 897087 . T . PASS END=897103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:16,0 chr1 897104 . A . PASS END=897104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 897105 . T . PASS END=897121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr1 897122 . A . PASS END=897122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 897123 . A . PASS END=897128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 897129 . A . PASS END=897129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 897130 . G . PASS END=897130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 897206 . A . PASS END=897208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 897209 . C . PASS END=897209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 897210 . T . PASS END=897276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,576:0,48,255:18,0 chr1 897277 . T . PASS END=897280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 897281 . C . PASS END=897285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 897286 . C . PASS END=897286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr1 897287 . C . PASS END=897287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 897288 . C . PASS END=897324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,501:0,41,255:18,0 chr1 897325 . G C, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,5,0:0,14,0:54:142,57,0,736,57,736:255,57,0:0,0:1.0418e+02,5.4185e+01,1.6567e-05,4.5000e+02,8.8955e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,12:0,0,9,10 chr1 897326 . C . PASS END=897338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:15,0 chr1 897339 . A . PASS END=897352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,504:0,39,255:13,0 chr1 897353 . G . PASS END=897362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr1 897363 . A . PASS END=897385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 897386 . G . PASS END=897394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 897395 . A . PASS END=897395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr1 897396 . C . PASS END=897397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 897398 . G . PASS END=897400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:13,0 chr1 897401 . G . PASS END=897408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,399:0,39,255:13,0 chr1 897409 . G . PASS END=897427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 897666 . G . PASS END=897666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 897667 . C . PASS END=897667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 897668 . A . PASS END=897680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,945:0,62,255:25,0 chr1 897681 . C . PASS END=897682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,823:0,55,255:21,0 chr1 897683 . T . PASS END=897688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 897689 . C . PASS END=897703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 897704 . A . PASS END=897704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:27,0 chr1 897705 . G . PASS END=897705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 897706 . A . PASS END=897708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1025:0,74,255:30,0 chr1 897709 . T . PASS END=897710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 897711 . A . PASS END=897711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1075:0,77,255:29,0 chr1 897712 . G . PASS END=897727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1395:0,99,255:38,0 chr1 897728 . C . PASS END=897728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 897729 . T . PASS END=897747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1330:0,87,255:40,0 chr1 897748 . T . PASS END=897748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1256:0,70,255:37,0 chr1 897749 . C . PASS END=897810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1189:0,83,255:40,0 chr1 897811 . T . PASS END=897811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 897812 . G . PASS END=897825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1180:0,83,255:32,0 chr1 897826 . A . PASS END=897843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:25,0 chr1 897844 . T . PASS END=897851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,58,255:20,0 chr1 898084 . C . PASS END=898086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 898087 . A . PASS END=898093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 898094 . G . PASS END=898096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 898097 . T . PASS END=898097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr1 898098 . G . PASS END=898107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 898108 . T . PASS END=898108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 898109 . T . PASS END=898114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 898115 . G . PASS END=898115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 898116 . C . PASS END=898129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,666:0,54,255:18,0 chr1 898130 . T . PASS END=898160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,63,255:26,0 chr1 898161 . G . PASS END=898165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 898166 . A . PASS END=898166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 898167 . C . PASS END=898198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1149:0,80,255:32,0 chr1 898199 . T . PASS END=898199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 898200 . G . PASS END=898207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1090:0,93,255:31,0 chr1 898208 . A . PASS END=898208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 898209 . C . PASS END=898226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1180:0,90,255:31,0 chr1 898227 . G . PASS END=898227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 898228 . G . PASS END=898230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 898231 . G . PASS END=898244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 898245 . C . PASS END=898246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 898247 . G . PASS END=898247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 898248 . C . PASS END=898250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 898251 . A . PASS END=898276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 898277 . G . PASS END=898281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 898282 . G . PASS END=898285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 898286 . T . PASS END=898288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,690:0,46,255:19,0 chr1 898289 . T . PASS END=898293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 898294 . G . PASS END=898295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 898296 . G . PASS END=898297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 898412 . G . PASS END=898423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:26,0 chr1 898424 . G . PASS END=898610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1002:0,81,255:40,0 chr1 898611 . A . PASS END=898611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:29,0 chr1 898612 . A . PASS END=898658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1194:0,83,255:31,0 chr1 898659 . C . PASS END=898692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,937:0,62,255:26,0 chr1 898717 . C . PASS END=898729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:24,0 chr1 898730 . T . PASS END=898730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 898731 . C . PASS END=898739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 898740 . C . PASS END=898783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 898784 . G . PASS END=898784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 898785 . A . PASS END=898817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr1 898818 . G . PASS END=898818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 898819 . T . PASS END=898829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 898830 . T . PASS END=898834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 898835 . G . LowGQ END=898835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,518:4,0,255:9,0 chr1 898836 . G . PASS END=898842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,495:0,31,255:13,0 chr1 898843 . G . PASS END=898844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 898845 . A . PASS END=898845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:12,0 chr1 898846 . C . PASS END=898859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:16,0 chr1 898860 . A . PASS END=898860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 898861 . T . PASS END=898868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:16,0 chr1 898869 . C . PASS END=898869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 898870 . C . PASS END=898884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,560:0,48,255:18,0 chr1 899300 . T . PASS END=899300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 899301 . G . PASS END=899353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1031:0,80,255:32,0 chr1 899354 . C . PASS END=899354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 899355 . A . PASS END=899358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 899359 . G . PASS END=899359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 899360 . G . PASS END=899365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 899366 . C . PASS END=899378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,970:0,67,255:26,0 chr1 899379 . G . PASS END=899379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 899380 . C . PASS END=899388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 899487 . A . PASS END=899501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1148:0,86,255:34,0 chr1 899502 . C . PASS END=899503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:32,0 chr1 899504 . G . PASS END=899508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1227:0,88,255:34,0 chr1 899509 . C . PASS END=899509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:33,0 chr1 899510 . G . PASS END=899514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1217:0,86,255:34,0 chr1 899515 . C . PASS END=899515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:33,0 chr1 899516 . G . PASS END=899520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:32,0 chr1 899521 . C . PASS END=899521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 899522 . T . PASS END=899558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:33:0,81,1143:0,81,255:36,0 chr1 899559 . A . PASS END=899559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr1 899560 . G . PASS END=899560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 899729 . G . PASS END=899731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 899732 . A . PASS END=899732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 899733 . A . PASS END=899736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 899737 . G . PASS END=899737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 899738 . T . PASS END=899746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:25,0 chr1 899747 . G . PASS END=899747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 899748 . T . PASS END=899748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 899749 . G . PASS END=899749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 899750 . G . PASS END=899750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 899751 . C . PASS END=899751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 899752 . G . PASS END=899752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 899753 . T . PASS END=899763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 899764 . C . PASS END=899764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:26,0 chr1 899765 . C . PASS END=899772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:29,0 chr1 899773 . C . PASS END=899773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 899774 . T . PASS END=899774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 899775 . C . PASS END=899775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 899776 . A . PASS END=899776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 899777 . G . PASS END=899777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 899778 . C . PASS END=899780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 899781 . G . PASS END=899781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 899782 . C . PASS END=899782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 899783 . G . PASS END=899786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 899787 . C . PASS END=899790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1054:0,74,255:26,0 chr1 899791 . G . PASS END=899792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 899793 . T . PASS END=899797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 899798 . G . PASS END=899798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 899799 . G . PASS END=899799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 899800 . T . PASS END=899800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:24,0 chr1 899801 . G . PASS END=899804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1172:0,83,255:29,0 chr1 899805 . T . PASS END=899805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:24,0 chr1 899806 . G . PASS END=899815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,77,255:25,0 chr1 899816 . G . PASS END=899816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,969:0,10,255:23,0 chr1 899817 . G . PASS END=899828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,962:0,65,255:26,0 chr1 899829 . G . PASS END=899829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:25,0 chr1 899830 . C . PASS END=899845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,909:0,68,255:26,0 chr1 899846 . T . PASS END=899846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr1 899847 . C . PASS END=899847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 899848 . G . PASS END=899848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:21,0 chr1 899849 . G . PASS END=899852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:25,0 chr1 899853 . A . PASS END=899853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,987:0,59,255:24,0 chr1 899854 . G . PASS END=899872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:25,0 chr1 899873 . G . PASS END=899873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 899874 . G . PASS END=899880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 899881 . G . PASS END=899881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:18,0 chr1 899882 . G . PASS END=899887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,743:0,47,255:18,0 chr1 899888 . G . PASS END=899888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 899889 . T . PASS END=899889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr1 899890 . G . PASS END=899891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 899892 . C . PASS END=899892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 899893 . G . PASS END=899898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 899899 . G . PASS END=899899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 899900 . A . PASS END=899901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 899902 . T . PASS END=899902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 899903 . A . PASS END=899910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 900343 . G . PASS END=900344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 900345 . G . PASS END=900346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 900347 . A . PASS END=900347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 900348 . C . PASS END=900349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 900350 . C . PASS END=900356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 900357 . T . PASS END=900357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:24,0 chr1 900358 . G . PASS END=900370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,872:0,64,255:26,0 chr1 900371 . G . PASS END=900560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1009:0,83,255:40,0 chr1 900561 . C . PASS END=900571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,87,255:26,0 chr1 901588 . A . PASS END=901589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 901590 . G . PASS END=901590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 901591 . T . PASS END=901591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 901592 . G . PASS END=901593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 901594 . G . PASS END=901604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,743:0,47,255:19,1 chr1 901605 . C . PASS END=901605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:31:22:0,31,757:0,31,255:19,1 chr1 901606 . C . PASS END=901606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,681:0,8,255:19,0 chr1 901607 . C G, 106.04 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,10,0:0,10,0:56:144,59,0,726,59,726:255,24,0:1,0:1.0604e+02,5.6036e+01,1.0872e-05,4.5000e+02,9.0806e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,9:0,0,11,9 chr1 901608 . G . PASS END=901609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 901610 . G . PASS END=901611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 901612 . G . PASS END=901612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 901613 . G . PASS END=901614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 901615 . C . PASS END=901618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 901619 . A . PASS END=901619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 901620 . A . PASS END=901620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr1 901621 . G . PASS END=901625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 901626 . C . PASS END=901627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 901628 . C . PASS END=901628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 901629 . C . PASS END=901631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 901632 . G . PASS END=901632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 901633 . T . PASS END=901636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 901637 . C . PASS END=901651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 901652 . A G, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,9,0:0,11,0:57:145,60,0,773,60,773:255,60,0:0,0:1.0719e+02,5.7194e+01,8.2835e-06,4.5000e+02,9.1964e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,12:0,0,13,7 chr1 901653 . G . PASS END=901659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 901660 . G . PASS END=901662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 901663 . T . PASS END=901664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 901665 . C . PASS END=901686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 901687 . T . PASS END=901689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,770:0,52,255:21,0 chr1 901690 . G . PASS END=901690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 901691 . G . PASS END=901692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 901693 . C . PASS END=901693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 901694 . C . PASS END=901705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 901706 . T . PASS END=901707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 901708 . C . PASS END=901711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 901712 . A . PASS END=901712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 901713 . A . PASS END=901718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 901719 . G . PASS END=901719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 901720 . C . PASS END=901728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 901729 . T . PASS END=901751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,759:0,47,255:20,0 chr1 901752 . G . PASS END=901754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 901755 . C . PASS END=901756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 901757 . G . PASS END=901822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:24,0 chr1 901823 . G . PASS END=901823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:22,0 chr1 901824 . A . PASS END=901832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 901833 . A . PASS END=901840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 901841 . C . PASS END=901841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 901842 . T . PASS END=901842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 901843 . G . PASS END=901843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 901844 . C . PASS END=901849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 901850 . G . PASS END=901850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 901851 . G . PASS END=901851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 901852 . A . PASS END=901856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 901857 . G . PASS END=901858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 901859 . G . PASS END=901871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:26,0 chr1 901872 . G . PASS END=901874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 901875 . C . PASS END=901875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr1 901876 . A . PASS END=901876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 901877 . G . PASS END=901878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 901879 . G . PASS END=901881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 901882 . C . PASS END=901882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 901883 . C . PASS END=901887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 901888 . T . PASS END=901888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:26,0 chr1 901889 . T . PASS END=901889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 901890 . G . PASS END=901893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:26,0 chr1 901894 . A . PASS END=901917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 901918 . A . PASS END=901921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 901922 . G . PASS END=901924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 901925 . A . PASS END=901926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 901927 . T . PASS END=901927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:24,0 chr1 901928 . G . PASS END=901932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 901933 . C . PASS END=901937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 901938 . G . PASS END=901938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 901939 . G . PASS END=901940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 901941 . C . PASS END=901941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 901942 . C . PASS END=901944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 901945 . A . PASS END=901970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,71,255:26,0 chr1 901971 . A . PASS END=901971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,856:0,47,255:24,0 chr1 901972 . A . PASS END=901994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,909:0,62,255:26,0 chr1 902084 . A . PASS END=902084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 902085 . G . PASS END=902085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 902086 . A . PASS END=902096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 902097 . C . PASS END=902097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 902098 . G . PASS END=902103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 902104 . C . PASS END=902104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 902105 . G . PASS END=902157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,839:0,62,255:26,0 chr1 902158 . A . PASS END=902158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:24,0 chr1 902159 . G . PASS END=902180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,808:0,65,255:26,0 chr1 902181 . A . PASS END=902183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 905657 . G . PASS END=905743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1141:0,86,255:40,0 chr1 905744 . A . PASS END=905744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1510:0,74,255:38,0 chr1 905745 . G . PASS END=905803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:33:0,90,1350:0,99,255:40,0 chr1 905901 . G . PASS END=905901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 905902 . A . PASS END=905902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 905903 . T . PASS END=905912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 905913 . T . PASS END=905918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 905919 . C . PASS END=905919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 905920 . T . PASS END=905936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 905937 . C . PASS END=905938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 905939 . C . PASS END=905950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 905951 . G . PASS END=905951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 905952 . G . PASS END=905958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 905959 . G . PASS END=905980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 905981 . G . PASS END=905981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 906066 . G . PASS END=906091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:31,0 chr1 906092 . T . PASS END=906092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1054:0,79,255:30,0 chr1 906093 . G . PASS END=906107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:32,0 chr1 906108 . G . PASS END=906108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:29,0 chr1 906109 . G . PASS END=906149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1241:0,89,255:35,0 chr1 906150 . G . PASS END=906150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 906151 . C . PASS END=906182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1169:0,80,255:34,0 chr1 906183 . G . PASS END=906204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,74,255:26,0 chr1 906205 . T . PASS END=906218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:31,0 chr1 906219 . A . PASS END=906219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 906220 . C . PASS END=906240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1149:0,80,255:31,0 chr1 906241 . T . PASS END=906241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:29,0 chr1 906242 . C . PASS END=906248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:30,0 chr1 906249 . C . PASS END=906282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,892:0,61,255:26,0 chr1 906283 . T . PASS END=906283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:24,0 chr1 906284 . G . PASS END=906284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:24,0 chr1 906285 . C . PASS END=906285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr1 906286 . T . PASS END=906321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 906322 . A . PASS END=906322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 906323 . C . PASS END=906347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:24,0 chr1 906348 . C . PASS END=906348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 906349 . T . PASS END=906352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 906353 . G . PASS END=906354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 906355 . G . PASS END=906364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 906365 . C . PASS END=906365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 906366 . T . PASS END=906384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 906385 . A . PASS END=906386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,855:0,42,255:20,0 chr1 906457 . G . PASS END=906475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 906476 . T . PASS END=906476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 906477 . C . PASS END=906485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:24,0 chr1 906486 . T . PASS END=906486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:23,0 chr1 906487 . T . PASS END=906496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 906497 . G . PASS END=906506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1125:0,90,255:30,0 chr1 906507 . G . PASS END=906507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 906508 . C . PASS END=906508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:29,0 chr1 906509 . T . PASS END=906509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 906510 . G . PASS END=906510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 906511 . C . PASS END=906533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1066:0,80,255:30,0 chr1 906534 . C . PASS END=906534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 906535 . G . PASS END=906536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 906537 . C . PASS END=906541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1008:0,71,255:26,0 chr1 906542 . G . PASS END=906560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1048:0,87,255:29,0 chr1 906561 . G . PASS END=906561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 906562 . G . PASS END=906571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 906572 . A . PASS END=906597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,930:0,62,255:25,0 chr1 906598 . A . PASS END=906599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 906704 . G . PASS END=906704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:30,0 chr1 906705 . A . PASS END=906705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 906706 . G . PASS END=906706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1015:0,38,255:29,0 chr1 906707 . C . PASS END=906707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 906708 . A . PASS END=906708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 906709 . G . PASS END=906709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1024:0,38,255:29,0 chr1 906710 . T . PASS END=906713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 906714 . A . PASS END=906714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 906715 . C . PASS END=906716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:32,0 chr1 906717 . G . PASS END=906717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:31,0 chr1 906718 . G . PASS END=906728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1205:0,87,255:40,0 chr1 906729 . T . PASS END=906729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:40,0 chr1 906730 . G . PASS END=906738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,110,1700:0,110,255:40,0 chr1 906739 . G . PASS END=906739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1620:0,72,255:40,0 chr1 906740 . T . PASS END=906743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:47:0,94,1560:0,94,255:40,0 chr1 906744 . T . PASS END=906784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:42:0,86,1601:0,86,255:40,0 chr1 907455 . G . PASS END=907460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 907461 . C . PASS END=907469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:24,0 chr1 907470 . C . PASS END=907470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:24,0 chr1 907471 . G . PASS END=907491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,939:0,75,255:26,0 chr1 907492 . A . PASS END=907492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr1 907493 . G . PASS END=907504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 907505 . G . PASS END=907505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 907506 . C . PASS END=907512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr1 907513 . G . PASS END=907513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 907514 . C . PASS END=907530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 907668 . G . PASS END=907675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:25,0 chr1 907676 . A . PASS END=907676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:24,0 chr1 907677 . T . PASS END=907680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,938:0,78,255:26,0 chr1 907681 . C . PASS END=907683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 907684 . C . PASS END=907685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 907686 . T . PASS END=907698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:32,0 chr1 907699 . C . PASS END=907699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr1 907700 . G . PASS END=907741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:33,0 chr1 907742 . G . PASS END=907775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:26,0 chr1 907776 . C . PASS END=907776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 907777 . T . PASS END=907783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr1 907784 . G . PASS END=907804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 908241 . G . PASS END=908254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 908255 . C . PASS END=908255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 908256 . C . PASS END=908268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,868:0,69,255:26,0 chr1 908269 . C . PASS END=908348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,997:0,81,255:30,0 chr1 908349 . T . PASS END=908369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:25,0 chr1 908370 . T . PASS END=908370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 908371 . G . PASS END=908374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 908375 . C . PASS END=908389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,690:0,46,255:19,0 chr1 908390 . G . PASS END=908390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 908566 . G . PASS END=908567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 908568 . C . PASS END=908576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 908577 . C . PASS END=908577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 908578 . T . PASS END=908578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 908579 . C . PASS END=908579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 908580 . T . PASS END=908622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 908623 . A . PASS END=908623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 908624 . G . PASS END=908706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,786:0,64,255:26,0 chr1 908880 . C . PASS END=908886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 908887 . G . PASS END=908896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:24,0 chr1 908897 . G . PASS END=908897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:23,0 chr1 908898 . G . PASS END=908900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 908901 . A . PASS END=908901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr1 908902 . G . PASS END=908906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr1 908907 . C . PASS END=908911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 908912 . T . PASS END=908913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 908914 . C . PASS END=908924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 908925 . A . PASS END=908925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 908926 . C . PASS END=908935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 908936 . A . PASS END=908961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 908962 . C . PASS END=908962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr1 908963 . C . PASS END=908968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 908969 . A . PASS END=908969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 908970 . C . PASS END=908975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 908976 . G . PASS END=908977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 908978 . C . PASS END=908978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 908979 . A . PASS END=909005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 909006 . C . PASS END=909010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 909011 . C . PASS END=909011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr1 909012 . C . PASS END=909020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 909213 . T . PASS END=909231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,566:0,45,255:19,0 chr1 909232 . G . PASS END=909237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 909238 . G C, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,16,0:0,7,0:66:154,69,0,889,69,889:255,69,0:0,0:1.1622e+02,6.6223e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,13:0,0,11,12 chr1 909239 . T . PASS END=909259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:25,0 chr1 909260 . A . PASS END=909260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 909261 . C . PASS END=909265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,969:0,75,255:26,0 chr1 909266 . C . PASS END=909275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 909276 . G . PASS END=909305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1141:0,90,255:32,0 chr1 909306 . T . PASS END=909306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 909307 . G . PASS END=909309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 909310 . C . PASS END=909310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 909311 . C . PASS END=909314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 909315 . G . PASS END=909315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 909316 . G . PASS END=909318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 909319 . C . PASS END=909323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 909324 . G . PASS END=909324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:25,0 chr1 909325 . G . PASS END=909329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 909330 . T . PASS END=909335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:27,0 chr1 909336 . C . PASS END=909351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 909352 . C . PASS END=909352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:19,0 chr1 909353 . C . PASS END=909354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 909355 . T . PASS END=909357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,56,255:15,0 chr1 909358 . A . PASS END=909358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:14,0 chr1 909359 . G . PASS END=909362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,765:0,42,255:18,0 chr1 909363 . A . PASS END=909363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:16,0 chr1 909364 . G . PASS END=909405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,538:0,40,255:18,0 chr1 909406 . C . PASS END=909414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 909415 . C . PASS END=909426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:21:12:0,21,315:0,26,255:10,0 chr1 909427 . A . PASS END=909427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:6,0 chr1 909428 . G . PASS END=909431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:7,0 chr1 909696 . G . PASS END=909697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 909698 . C . PASS END=909711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 909712 . A . PASS END=909712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 909713 . A . PASS END=909716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 909717 . T . PASS END=909719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 909720 . C . PASS END=909730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 909731 . G . PASS END=909736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:16,0 chr1 909737 . T . PASS END=909737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 909738 . C . PASS END=909744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 909822 . A . PASS END=909829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 909830 . T . PASS END=909830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 909831 . C . PASS END=909832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 909833 . C . PASS END=909835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 909836 . A . PASS END=909849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 909850 . C . PASS END=909934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:18,0 chr1 909935 . G . PASS END=909955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 911552 . C . PASS END=911552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 911553 . T . PASS END=911553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 911554 . A . PASS END=911554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 911555 . G . PASS END=911555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 911556 . G . PASS END=911557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 911558 . G . PASS END=911561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 911562 . G . PASS END=911562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 911563 . G . PASS END=911584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 911585 . C . PASS END=911585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 911586 . C . PASS END=911594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:18,0 chr1 911595 . A G, 95.15 PASS DP=16;MQ=248.62;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,10,0:0,6,0:45:133,48,0,612,48,612:255,57,0:0,0:9.5153e+01,4.5153e+01,1.3254e-04,4.5000e+02,7.9923e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,9:0,0,9,7 chr1 911596 . C . PASS END=911596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 911597 . C . PASS END=911597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 911598 . T . PASS END=911600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 911601 . C . PASS END=911601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 911602 . G . PASS END=911602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 911603 . G . PASS END=911603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:16,0 chr1 911604 . C . PASS END=911604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 911605 . G . PASS END=911605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 911606 . G . PASS END=911613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 911614 . G . PASS END=911614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 911615 . G . PASS END=911625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 911626 . T . PASS END=911632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 911633 . G . PASS END=911633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 911634 . A . PASS END=911647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 911648 . G . PASS END=911648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 911649 . G . PASS END=911649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 911879 . C . PASS END=911890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,897:0,62,255:26,0 chr1 911891 . C . PASS END=912002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1263:0,89,255:40,0 chr1 912003 . C . PASS END=912003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:31,0 chr1 912004 . C . PASS END=912004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr1 914261 . C . PASS END=914273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:16,0 chr1 914274 . A . PASS END=914274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,496:0,9,255:15,0 chr1 914275 . G . PASS END=914276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 914277 . C . PASS END=914277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr1 914278 . A . PASS END=914285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,588:0,48,255:17,0 chr1 914286 . C . PASS END=914286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 914287 . C . PASS END=914295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 914296 . A . PASS END=914320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:17,0 chr1 914321 . G . PASS END=914321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 914322 . C . PASS END=914324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 914325 . C . PASS END=914325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 914326 . G . PASS END=914326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 914327 . C . PASS END=914332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 914333 . C G, 92.14 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,5,0:0,10,0:42:130,45,0,574,45,574:255,45,0:0,0:9.2143e+01,4.2143e+01,2.6508e-04,4.5000e+02,7.6913e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,5:0,0,6,9 chr1 914334 . G . PASS END=914357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 914358 . G . PASS END=914358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 914359 . G . PASS END=914365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 914366 . G . PASS END=914366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 914367 . T . PASS END=914370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:13,0 chr1 914371 . A . PASS END=914395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 914396 . C . PASS END=914461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,623:0,41,255:19,0 chr1 914462 . C . PASS END=914462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 914463 . T . PASS END=914469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 914470 . A . PASS END=914471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 914472 . G . PASS END=914483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 914484 . A . PASS END=914484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 914485 . G . PASS END=914488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 914489 . C . PASS END=914519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,426:0,33,255:13,0 chr1 914520 . C . PASS END=914524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 914525 . T . PASS END=914525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 914526 . C . PASS END=914528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 914529 . C . PASS END=914532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 914533 . T . PASS END=914533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 914534 . G . PASS END=914539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 914540 . C . PASS END=914544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 914545 . T . PASS END=914545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 914546 . C . PASS END=914547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 914548 . G . PASS END=914589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 914590 . G . PASS END=914590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 914591 . G . PASS END=914594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 914595 . C . PASS END=914602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 914603 . C . PASS END=914624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:16,0 chr1 914625 . G . PASS END=914635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:16:0,35,585:0,35,255:13,0 chr1 914636 . T . PASS END=914643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 914644 . C . PASS END=914665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr1 914666 . C . PASS END=914674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 914675 . T . PASS END=914679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 914680 . G . PASS END=914693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:16,0 chr1 914694 . G . PASS END=914694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 914695 . G . PASS END=914722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 914723 . G . PASS END=914773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:13,0 chr1 914774 . C . PASS END=914774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 914775 . A . PASS END=914788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 914789 . A . PASS END=914789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 914790 . G . PASS END=914791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 914792 . C . PASS END=914792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 914793 . T . PASS END=914797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 914798 . G . PASS END=914798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 914799 . C . PASS END=914814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,427:0,36,255:12,0 chr1 914815 . G . PASS END=914818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 914819 . C . PASS END=914820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 914821 . G . PASS END=914826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 914827 . G . PASS END=914840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,333:0,27,255:9,0 chr1 914841 . G . PASS END=914848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,374:0,30,255:11,0 chr1 914849 . C . PASS END=914849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 914850 . C . PASS END=914851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 914852 . G C, 85.67 PASS DP=13;MQ=248.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,13,0:1.000,0.000:13:0,4,0:0,9,0:36:123,39,0,474,39,474:255,39,0:0,0:8.5668e+01,3.5668e+01,1.1782e-03,4.5000e+02,7.0438e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,7:0,0,7,6:914852 chr1 914853 . T . PASS END=914856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,458:0,39,255:13,0 chr1 914857 . G . PASS END=914857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 914858 . A . PASS END=914861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 914862 . T . PASS END=914867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:11:0,22,405:0,22,255:9,0 chr1 914868 . A . PASS END=914868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:8,0 chr1 914869 . T . PASS END=914875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,333:0,27,255:9,0 chr1 914876 . T C, 74.10 PASS DP=9;MQ=248.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,9,0:1.000,0.000:9:0,1,0:0,8,0:24:112,27,0,349,27,349:255,27,0:0,0:7.4104e+01,2.4104e+01,1.6918e-02,3.4570e+02,5.8874e+01,3.4870e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,2:0,0,3,6:914852 chr1 914877 . G . PASS END=914877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 914878 . G . PASS END=914878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 914879 . G . PASS END=914889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 914890 . G . PASS END=914890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 914891 . A . PASS END=914895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 914896 . C . PASS END=914896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 914897 . G . PASS END=914897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 914898 . C . PASS END=914898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 914899 . A . LowGQ END=914899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr1 914900 . C . PASS END=914909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 914910 . C . PASS END=914910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 914911 . C . PASS END=914914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 914915 . G . PASS END=914918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 914919 . T . LowGQ END=914919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 914920 . T . PASS END=914920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 914921 . G . PASS END=914921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr1 914922 . G . PASS END=914926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 914927 . G . PASS END=914927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 914928 . A . PASS END=914929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 914930 . C . PASS END=914930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 914931 . C . PASS END=914934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 914935 . G . PASS END=914936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 914937 . G . PASS END=914937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 914938 . G . PASS END=914938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr1 914939 . G . PASS END=914939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 914940 . T C, 74.10 PASS DP=9;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,2,0:0,7,0:24:112,27,0,341,27,341:255,27,0:0,0:7.4101e+01,2.4101e+01,1.6929e-02,3.3813e+02,5.8871e+01,3.4113e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,6:0,0,6,3 chr1 914941 . G . PASS END=914943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 914944 . C . PASS END=914944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 914945 . C . PASS END=914947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 914948 . A . PASS END=914948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 914949 . G . PASS END=914952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 914953 . C . PASS END=914953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 914954 . A . PASS END=914972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:12,0 chr1 914973 . G . PASS END=914973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 914974 . G . PASS END=914977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 914978 . C . PASS END=914997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 914998 . T . PASS END=914998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 914999 . C . PASS END=915021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 915022 . C . PASS END=915022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 915023 . G . PASS END=915025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 915026 . T . PASS END=915026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:12,0 chr1 915027 . G . PASS END=915030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 915031 . G . PASS END=915035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 915036 . G . LowGQ END=915036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,418:5,0,255:12,0 chr1 915037 . G . PASS END=915047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 915048 . G . PASS END=915048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 915049 . G . PASS END=915054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 915055 . G . PASS END=915062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 915063 . A . PASS END=915063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 915064 . A . PASS END=915077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 915078 . A . PASS END=915078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 915079 . A . PASS END=915082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 915083 . C . LowGQ END=915083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 915084 . G . PASS END=915085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 915086 . T . PASS END=915086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 915087 . G . PASS END=915097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 915098 . T . PASS END=915098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 915099 . C . PASS END=915100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 915101 . T . PASS END=915101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 915102 . C . PASS END=915108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 915109 . G . PASS END=915116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 915117 . G . PASS END=915134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 915135 . C . PASS END=915136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 915137 . C . PASS END=915138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 915139 . T . PASS END=915150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 915151 . A . PASS END=915151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 915152 . C . PASS END=915155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 915156 . G . PASS END=915156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 915157 . C . PASS END=915161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 915162 . T . PASS END=915162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 915163 . G . PASS END=915189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:13,0 chr1 915190 . T . PASS END=915221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,474:0,36,255:13,0 chr1 915222 . G . PASS END=915226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 915227 . A G, 92.15 PASS DP=15;MQ=249.21;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,6,0:0,9,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,3:0,0,9,6 chr1 915228 . T . PASS END=915232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 915233 . G . PASS END=915233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 915234 . C . PASS END=915243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,587:0,46,255:19,0 chr1 915244 . G . PASS END=915244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 915245 . G . PASS END=915264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1026:0,87,255:37,0 chr1 915265 . G . PASS END=915563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:35:0,81,1215:0,92,255:40,0 chr1 915564 . C . PASS END=915572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:29:0,66,990:0,71,255:26,0 chr1 915573 . T . PASS END=915573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,947:0,54,255:20,0 chr1 915574 . G . PASS END=915595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:22,0 chr1 915596 . G . PASS END=915596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 915597 . G . PASS END=915598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 915599 . T . PASS END=915631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,676:0,57,255:19,0 chr1 915632 . G . PASS END=915636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:19:0,30,450:0,57,255:10,0 chr1 915637 . G . PASS END=915648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:15:0,42,630:0,45,255:15,0 chr1 915649 . C . PASS END=915650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 915651 . C . PASS END=915652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 915653 . A . PASS END=915653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 915654 . A . PASS END=915660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 915661 . C . PASS END=915661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 915662 . C . PASS END=915667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 915668 . T . PASS END=915668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 915669 . G . PASS END=915672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 915673 . T . PASS END=915673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 915674 . C . PASS END=915676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 915677 . G . PASS END=915677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 915678 . C . PASS END=915693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:17,0 chr1 915694 . C . PASS END=915694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:16,0 chr1 915695 . C . PASS END=915695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 915696 . A . PASS END=915696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,450:0,18,255:14,0 chr1 915697 . G . PASS END=915704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr1 915705 . A . PASS END=915705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:18,0 chr1 915706 . G . PASS END=915706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 915707 . C . PASS END=915707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 915708 . T . PASS END=915716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 915717 . A . PASS END=915717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:18,0 chr1 915718 . C . PASS END=915739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,845:0,69,255:25,0 chr1 915740 . C . PASS END=915740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 915741 . G . PASS END=915770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,779:0,72,255:24,0 chr1 915771 . A . PASS END=915771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 915772 . C . PASS END=915827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,743:0,60,255:22,0 chr1 915828 . C . PASS END=915828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 915829 . C . PASS END=915838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 915839 . T . PASS END=915839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 915840 . G . PASS END=915843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 915844 . C . PASS END=915847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 915848 . C . PASS END=915856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 915857 . T . PASS END=915903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,529:0,45,255:19,0 chr1 915904 . G . PASS END=915906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 915907 . C . PASS END=915918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 915919 . G . PASS END=915953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 915954 . C . PASS END=915955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 915956 . C . PASS END=915967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:10,0 chr1 915968 . G . LowGQ END=915968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:9,0 chr1 915969 . T . PASS END=915973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:8,0 chr1 915974 . C . LowGQ END=915976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,324:0,0,255:9,1 chr1 915977 . G . PASS END=915982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr1 915983 . G . PASS END=915986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 915987 . A . LowGQ END=915987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:10,0 chr1 915988 . A . PASS END=916011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,380:0,33,255:11,0 chr1 916012 . G . PASS END=916056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,288:0,27,255:9,0 chr1 916057 . C . PASS END=916085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 916086 . C . PASS END=916087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 916088 . G . PASS END=916109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,402:0,33,255:12,0 chr1 916110 . C . PASS END=916110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 916111 . T . PASS END=916119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 916120 . C . PASS END=916120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 916121 . C . PASS END=916122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 916123 . A . PASS END=916140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,319:0,27,255:9,0 chr1 916141 . C . PASS END=916222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 916223 . G . PASS END=916225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 916226 . C . PASS END=916233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 916234 . A . PASS END=916235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 916236 . A . PASS END=916256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 916257 . G . PASS END=916336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 916337 . A . PASS END=916337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 916338 . C . PASS END=916395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:19,0 chr1 916396 . T . PASS END=916396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 916397 . G . PASS END=916402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 916403 . T . PASS END=916404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 916405 . T . PASS END=916407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr1 916408 . A . PASS END=916408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:15,0 chr1 916409 . T . PASS END=916409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 916517 . C . PASS END=916521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 916522 . A . PASS END=916532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 916533 . C . PASS END=916547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 916548 . C . PASS END=916548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 916549 . A G, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,18,0:0,4,0:63:151,66,0,853,66,853:255,66,0:0,0:1.1321e+02,6.3214e+01,2.0709e-06,4.5000e+02,9.7984e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,14:0,0,10,12 chr1 916550 . T . PASS END=916553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 917445 . C . PASS END=917497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1305:0,120,255:40,0 chr1 934439 . T . PASS END=934458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 934459 . A . PASS END=934459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 934460 . G . PASS END=934469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 934470 . G . PASS END=934474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:5,0 chr1 934475 . C . PASS END=934475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 934476 . T . PASS END=934582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,149:0,12,149:6,0 chr1 934583 . C . PASS END=934608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 934609 . C . PASS END=934619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 934620 . G . PASS END=934640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:17,0 chr1 934641 . C . PASS END=934641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 934642 . G . PASS END=934671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 934672 . C . PASS END=934674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 934675 . C . PASS END=934675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 934676 . C . PASS END=934701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 934702 . C . PASS END=934702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 934703 . G . PASS END=934710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 934711 . G . PASS END=934711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 934712 . G . PASS END=934713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 934714 . C . PASS END=934774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,675:0,41,255:19,0 chr1 934775 . G . PASS END=934775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 934776 . T . PASS END=934780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 934781 . G . PASS END=934781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 934782 . C . PASS END=934783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 934784 . C . PASS END=934787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 934788 . A . PASS END=934788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:10,0 chr1 934789 . C . PASS END=934793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 934794 . G . PASS END=934794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 934795 . G . PASS END=934800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 934801 . C . PASS END=934812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 934906 . C . PASS END=934908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 934909 . T . PASS END=934909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 934910 . C . PASS END=934912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 934913 . C . PASS END=934913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 934914 . T . PASS END=934916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 934917 . A . PASS END=934917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 934918 . C . PASS END=934934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr1 934935 . A . PASS END=934935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 934936 . G . PASS END=934946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 934947 . G . PASS END=934958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 934959 . A . PASS END=934959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 934960 . T . PASS END=934963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 934964 . C . PASS END=934971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 934972 . C . PASS END=934972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 934973 . C . PASS END=934975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 934976 . C . PASS END=934977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 934978 . T . PASS END=934978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 934979 . C . PASS END=934985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 934986 . C . PASS END=934990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 934991 . G . PASS END=934993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 935072 . C . PASS END=935081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 935082 . A . PASS END=935082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 935083 . G . PASS END=935087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 935088 . T . PASS END=935088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 935089 . C . PASS END=935091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 935092 . G . PASS END=935092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 935093 . G . PASS END=935109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,415:0,39,255:13,0 chr1 935110 . G . PASS END=935110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 935111 . A . PASS END=935113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 935114 . G . PASS END=935114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 935115 . A . PASS END=935118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 935119 . T . PASS END=935119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr1 935120 . C . PASS END=935120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 935121 . T . PASS END=935121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:10,0 chr1 935122 . C . PASS END=935124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 935125 . T . PASS END=935125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:11,0 chr1 935126 . A . PASS END=935137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 935138 . G . PASS END=935138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 935139 . C . PASS END=935141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 935142 . C . PASS END=935144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 935145 . T . PASS END=935145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:8,0 chr1 935146 . T . PASS END=935152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 935153 . G . PASS END=935157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 935158 . G . PASS END=935163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 935164 . A . PASS END=935164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 935165 . G . PASS END=935168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 935169 . T . PASS END=935169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 935170 . G . PASS END=935171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 935172 . G . PASS END=935177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 935178 . G . PASS END=935180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 935181 . A . PASS END=935184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 935185 . G . PASS END=935216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr1 935217 . G . PASS END=935221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 935222 . C A, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,8,0:0,7,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,10:0,0,12,3 chr1 935223 . C . PASS END=935225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 935226 . A . PASS END=935255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,396:0,33,255:13,0 chr1 935256 . T C, 0.01 DRAGENSnpHardQUAL DP=11;MQ=250.00;MQRankSum=1.423;ReadPosRankSum=1.423;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:6,0,0:4,1,0:29:6,0,50,36,329,365:6,0,255:9,0:5.9457e-03,2.8640e+01,8.1640e+01,6.4415e+01,3.9230e+02,3.9631e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,1,0:6,4,0,1 chr1 935257 . C . PASS END=935259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 935260 . C . PASS END=935283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 935284 . T . PASS END=935285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 935286 . C . PASS END=935286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 935287 . G . PASS END=935307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 935308 . C . PASS END=935319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 935320 . A . PASS END=935326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 935327 . C . PASS END=935327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 935328 . G . PASS END=935329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 935330 . T . PASS END=935334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 935335 . C . PASS END=935339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 935340 . G . PASS END=935351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,147:0,12,147:4,0 chr1 935352 . A . PASS END=935353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 948954 . A . PASS END=948956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:17,0 chr1 949358 . C . PASS END=949358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 949364 . G . PASS END=949372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:18,0 chr1 949373 . C . PASS END=949373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 949374 . T . PASS END=949377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 949378 . G . PASS END=949378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 949379 . G . PASS END=949429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,578:0,44,255:19,0 chr1 949430 . T . PASS END=949450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 949451 . C . PASS END=949451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 949452 . A . PASS END=949453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 949454 . A . PASS END=949455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,662:0,44,255:19,0 chr1 949456 . C . PASS END=949456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 949457 . A . PASS END=949471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,719:0,47,255:19,0 chr1 949472 . G . PASS END=949475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 949476 . A . PASS END=949476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 949477 . C . PASS END=949478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 949479 . C . PASS END=949481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:56:22:0,56,853:0,56,255:20,0 chr1 949482 . T . PASS END=949483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 949484 . C . PASS END=949484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 949485 . A . PASS END=949485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 949486 . G . PASS END=949486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 949487 . C . PASS END=949511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 949512 . G . PASS END=949514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 949515 . T . PASS END=949515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 949516 . G . PASS END=949516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 949517 . G . PASS END=949519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 949520 . C . PASS END=949543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1178:0,83,255:32,0 chr1 949544 . A . PASS END=949544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 949545 . G . PASS END=949616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1148:0,83,255:33,0 chr1 949617 . T . PASS END=949617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:29,0 chr1 949618 . G . PASS END=949653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,88,255:35,0 chr1 949654 . A G, 148.41 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:98:186,101,0,1243,101,1243:255,102,0:0,0:1.4841e+02,9.8408e+01,0.0000e+00,4.5000e+02,1.3318e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,15:0,0,18,16 chr1 949655 . C . PASS END=949658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 949659 . T . PASS END=949659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 949660 . G . PASS END=949691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1149:0,82,255:34,0 chr1 949692 . T . PASS END=949832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1258:0,89,255:40,0 chr1 949833 . G . PASS END=949833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:27,0 chr1 949834 . C . PASS END=949841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:28,0 chr1 949842 . C . PASS END=949851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 949852 . G . PASS END=949854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 949855 . C . PASS END=949857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 949858 . A . PASS END=949858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 955553 . A . PASS END=955567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,47:0,6,47:3,0 chr1 955568 . C . PASS END=955591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr1 955592 . C . PASS END=955596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 955597 . G . PASS END=955597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 955598 . C . PASS END=955604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,255:0,21,255:9,0 chr1 955605 . T . PASS END=955619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 955620 . T . PASS END=955620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:10,0 chr1 955621 . C . PASS END=955628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:12,0 chr1 955629 . G . PASS END=955629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 955630 . A . PASS END=955707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 955708 . G . PASS END=955718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 955719 . A . PASS END=955719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 955720 . C . PASS END=955743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 955744 . C . PASS END=955753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:8:0,11,225:0,11,255:6,0 chr1 955757 . C . PASS END=955757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,210:3,0 chr1 957581 . G . PASS END=957593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 957594 . G . PASS END=957594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 957595 . G . PASS END=957615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 957616 . G . PASS END=957616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 957617 . G . PASS END=957636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 957637 . G . PASS END=957639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 957640 . C . PASS END=957644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 957645 . G . PASS END=957668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,543:0,44,255:19,0 chr1 957669 . T . PASS END=957674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 957675 . A . PASS END=957675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 957676 . C . PASS END=957682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 957683 . A . PASS END=957683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 957684 . T . PASS END=957701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr1 957702 . C . PASS END=957720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,720:0,47,255:19,0 chr1 957721 . C . PASS END=957730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 957731 . A . PASS END=957731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 957732 . A . PASS END=957736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:23,0 chr1 957737 . G . PASS END=957737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 957738 . C . PASS END=957749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 957750 . T . PASS END=957750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr1 957751 . G . PASS END=957766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr1 957767 . A . PASS END=957774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr1 957775 . G . PASS END=957775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:26,0 chr1 957776 . A . PASS END=957782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 957783 . A . PASS END=957784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 957785 . T . PASS END=957785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 957786 . C . PASS END=957792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 957793 . C . PASS END=957794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 957795 . T . PASS END=957795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 957796 . G . PASS END=957796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 957797 . C . PASS END=957800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 957801 . T . PASS END=957801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:24,0 chr1 957802 . C . PASS END=957824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,889:0,64,255:26,0 chr1 957825 . T . PASS END=957825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,831:0,34,255:21,0 chr1 957826 . G . PASS END=957834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,847:0,64,255:23,0 chr1 957835 . T . PASS END=957835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,768:0,38,255:22,0 chr1 957836 . G . PASS END=957836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 957837 . T . PASS END=957837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 957838 . G . PASS END=957839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 957840 . A . PASS END=957841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,717:0,30,255:21,0 chr1 957842 . G . PASS END=957842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 957846 . C . PASS END=957846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,692:0,36,255:16,0 chr1 969936 . A . PASS END=969945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 969946 . T . PASS END=969946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 969947 . G . PASS END=969957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:16,0 chr1 969958 . G . PASS END=969958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 969959 . G . PASS END=969986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 969987 . C . PASS END=970007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr1 970008 . G . PASS END=970008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 970009 . T . PASS END=970071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 970072 . T . PASS END=970080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 970081 . A . PASS END=970083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 970657 . A . PASS END=970704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,123,255:40,0 chr1 976045 . C . PASS END=976055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 976056 . A . PASS END=976089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,537:0,42,255:17,0 chr1 976090 . A . PASS END=976090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 976091 . C . PASS END=976147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,651:0,51,255:19,0 chr1 976148 . G . PASS END=976152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 976153 . C . PASS END=976175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:18,0 chr1 976176 . T . PASS END=976182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 976183 . A . PASS END=976197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 976198 . A . PASS END=976199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 976200 . C . PASS END=976200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 976201 . T . PASS END=976209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 976210 . C . PASS END=976225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 976226 . G . PASS END=976242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 976243 . T . PASS END=976260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 976553 . G . PASS END=976576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 976577 . T . PASS END=976577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 976578 . G . PASS END=976578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 976579 . A . PASS END=976611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 976612 . G . PASS END=976634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 976635 . C . PASS END=976649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 976650 . C . LowGQ END=976650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:9,0 chr1 976651 . T . PASS END=976655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 976656 . T . PASS END=976714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 976715 . A . PASS END=976716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 976717 . C . PASS END=976720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 976721 . T . PASS END=976722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 976723 . C . PASS END=976724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 976725 . C . PASS END=976728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 976729 . G . PASS END=976729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 976730 . C . PASS END=976755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,243:0,24,243:9,0 chr1 976756 . A . PASS END=976756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:6,0 chr1 976757 . A . PASS END=976769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,235:8,0 chr1 976770 . C . PASS END=976770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr1 976771 . C . PASS END=976777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 976858 . A . PASS END=976862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 976863 . T . PASS END=976863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 976864 . G . PASS END=976870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 976871 . C . PASS END=976871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:9,0 chr1 976872 . G . PASS END=976882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 976883 . C . PASS END=976896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr1 976897 . G . PASS END=976897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 976898 . C . PASS END=976898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 976899 . C . PASS END=976899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 976900 . G . PASS END=976920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:19,0 chr1 976921 . G . PASS END=976923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 976924 . C . PASS END=976924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,668:0,11,255:18,0 chr1 976925 . T . PASS END=976960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:22:0,60,843:0,64,255:26,0 chr1 976961 . G . PASS END=976961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 976962 . C . PASS END=976964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,810:0,61,255:26,0 chr1 976965 . G . PASS END=976966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr1 976967 . G . PASS END=976967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 976968 . C . PASS END=976969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1013:0,90,255:30,0 chr1 976970 . A . PASS END=976970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,950:0,59,255:29,0 chr1 976971 . G . PASS END=976971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 976972 . T . PASS END=976972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:30,0 chr1 976973 . G . PASS END=976975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1174:0,96,255:32,0 chr1 976976 . T . PASS END=976976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 976977 . G . PASS END=976989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1085:0,80,255:33,0 chr1 976990 . T . PASS END=976990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:31,0 chr1 976991 . C . PASS END=977000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1081:0,82,255:33,0 chr1 977001 . A . PASS END=977001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1040:0,66,255:31,0 chr1 977002 . A . PASS END=977038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1189:0,90,255:33,0 chr1 977039 . T . PASS END=977039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1023:0,51,255:28,0 chr1 977040 . C . PASS END=977040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 977041 . T . PASS END=977041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 977042 . C . PASS END=977042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 977043 . C . PASS END=977045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 977046 . C . PASS END=977046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 977047 . T . PASS END=977052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 977053 . A . PASS END=977054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:26,0 chr1 977055 . G . PASS END=977055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 977056 . T . PASS END=977056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr1 977057 . G . PASS END=977058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:25,0 chr1 977059 . G . PASS END=977059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr1 977060 . C . PASS END=977067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:26,0 chr1 977068 . A . PASS END=977069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,62,255:19,0 chr1 977070 . T . PASS END=977070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:18,0 chr1 977071 . G . PASS END=977078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:21:0,42,630:0,47,255:19,0 chr1 977079 . C . PASS END=977082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:39:21:0,39,585:0,46,255:13,0 chr1 977086 . A . PASS END=977086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 977336 . A . PASS END=977336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 977337 . C . PASS END=977367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1172:0,90,255:33,0 chr1 977368 . G . PASS END=977397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1255:0,89,255:35,0 chr1 977398 . T . PASS END=977398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1177:0,55,255:30,0 chr1 977399 . G . PASS END=977412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 977413 . G . PASS END=977442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,70,255:25,0 chr1 977443 . T . PASS END=977513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:20,0 chr1 977514 . C . PASS END=977522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,512:0,31,255:13,0 chr1 977523 . C . PASS END=977523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 977524 . A . PASS END=977524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 977525 . A . PASS END=977525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 977526 . G . PASS END=977532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 977533 . G . PASS END=977535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 977536 . C . PASS END=977536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr1 977537 . C . PASS END=977542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:12,0 chr1 977548 . C . PASS END=977548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 978619 . A . PASS END=978623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,737:0,57,255:19,0 chr1 978624 . G . PASS END=978624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 978625 . C . PASS END=978628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 978629 . G . PASS END=978647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr1 978648 . C . PASS END=978651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr1 978652 . G . PASS END=978655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 978656 . A . PASS END=978656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 978657 . T . PASS END=978663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 978664 . C . PASS END=978664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 978665 . G . PASS END=978680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr1 978681 . A . PASS END=978682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1026:0,60,255:31,0 chr1 978683 . C . PASS END=978683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 978684 . G . PASS END=978685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 978686 . G . PASS END=978816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1161:0,80,255:39,0 chr1 978817 . T . PASS END=978817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr1 978818 . G . PASS END=978822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 978823 . G . PASS END=978823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 978824 . C . PASS END=978828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 978829 . G . PASS END=978837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1080:0,77,255:28,0 chr1 978846 . C . PASS END=978846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 978918 . A . PASS END=978921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 978922 . C . PASS END=978948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr1 978949 . G . PASS END=978956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 978957 . C . PASS END=979026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:26,0 chr1 979027 . G . PASS END=979062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,698:0,46,255:19,0 chr1 979063 . C . PASS END=979068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 979069 . C . PASS END=979069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 979070 . A . PASS END=979070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 979071 . C . PASS END=979071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 979072 . A . PASS END=979073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 979074 . A . PASS END=979096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,630:0,41,255:19,0 chr1 979097 . T . PASS END=979097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 979098 . C . PASS END=979107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 979108 . C . PASS END=979109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 979110 . G . PASS END=979112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 979203 . A . PASS END=979205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,900:0,61,255:26,0 chr1 979206 . C . PASS END=979209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 979210 . T . PASS END=979210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 979211 . G . PASS END=979226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1056:0,87,255:30,0 chr1 979227 . C . PASS END=979227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 979228 . T . PASS END=979233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1163:0,90,255:30,0 chr1 979234 . G . PASS END=979234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 979235 . G . PASS END=979307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1101:0,86,255:40,0 chr1 979308 . A . PASS END=979308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 979309 . C . PASS END=979333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:29,0 chr1 979334 . G . PASS END=979352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 979353 . G . PASS END=979355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 979356 . T . PASS END=979379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:25,0 chr1 979380 . C . PASS END=979394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:19:0,45,675:0,57,255:19,0 chr1 979395 . G . PASS END=979396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 979397 . G . PASS END=979397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 979398 . A . PASS END=979403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:17:0,30,450:0,51,255:13,0 chr1 979409 . C . PASS END=979409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 979489 . C . PASS END=979496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:29:0,87,1049:0,87,255:34,0 chr1 979497 . G . PASS END=979497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:32,0 chr1 979498 . G . PASS END=979637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:37:0,80,1349:0,80,255:40,0 chr1 979714 . G . PASS END=979718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1455:0,104,255:39,0 chr1 979719 . C . PASS END=979719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:34,0 chr1 979720 . G . PASS END=979819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:86:34:0,86,1210:0,86,255:40,0 chr1 980538 . C . PASS END=980538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 980541 . G . PASS END=980572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 980573 . C . PASS END=980579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 980580 . A . PASS END=980580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 980581 . C . PASS END=980592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 980593 . G . PASS END=980593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 980594 . C . PASS END=980618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:11,0 chr1 980619 . T . PASS END=980619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 980620 . C . PASS END=980657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 980739 . G . PASS END=980753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 980754 . A . PASS END=980760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 980761 . T . PASS END=980761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 980762 . G . PASS END=980777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:12,0 chr1 980778 . C . PASS END=980793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 980794 . A . PASS END=980794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 980795 . G . PASS END=980831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 980832 . G . PASS END=980834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 980835 . G . PASS END=980835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 980836 . T . PASS END=980837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 980838 . A . PASS END=980840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 980841 . G . PASS END=980851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 980852 . G . PASS END=980903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,54,255:18,0 chr1 980907 . A . PASS END=980907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 981109 . A . PASS END=981109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 981113 . C . PASS END=981124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:25,0 chr1 981125 . A . PASS END=981128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 981129 . C . PASS END=981141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:32,0 chr1 981142 . C . PASS END=981142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 981143 . G . PASS END=981244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1133:0,87,255:40,0 chr1 981245 . G . PASS END=981245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 981246 . C . PASS END=981256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1164:0,93,255:32,0 chr1 981344 . A . PASS END=981344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 981345 . C . PASS END=981346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 981347 . C . PASS END=981348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,992:0,68,255:27,0 chr1 981349 . T . PASS END=981349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 981350 . C . PASS END=981350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 981351 . T . PASS END=981358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 981359 . C . PASS END=981359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 981360 . G . PASS END=981385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1117:0,80,255:36,0 chr1 981386 . T . PASS END=981386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:34,0 chr1 981387 . C . PASS END=981434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,92,255:37,0 chr1 981435 . G . PASS END=981435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 981436 . A . PASS END=981442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:27,0 chr1 981443 . C . PASS END=981444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,80,255:26,0 chr1 981445 . T . PASS END=981445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:24,0 chr1 981446 . G . PASS END=981468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:25,0 chr1 981540 . G . PASS END=981645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1260:0,88,255:40,0 chr1 981777 . A . PASS END=981801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,599:0,41,255:19,0 chr1 981802 . G . PASS END=981803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 981804 . C . PASS END=981804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 981805 . A . PASS END=981805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 981806 . T . PASS END=981806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 981807 . C . PASS END=981810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 981811 . C . PASS END=981812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 981813 . C . PASS END=981823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 981824 . A . PASS END=981839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,714:0,46,255:20,0 chr1 981840 . T . PASS END=981840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 981841 . C . PASS END=981842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 981843 . T . PASS END=981843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:16,0 chr1 981844 . G . PASS END=981850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,566:0,48,255:16,0 chr1 981851 . G . PASS END=981851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 981852 . C . PASS END=981854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 981855 . T . PASS END=981859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 981860 . G . PASS END=981861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,2 chr1 981862 . C . PASS END=981868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 981869 . G . PASS END=981869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,368:0,11,255:12,0 chr1 981870 . G . PASS END=981882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 981883 . G . LowGQ END=981883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,341:3,0,255:10,0 chr1 981884 . G . PASS END=981885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr1 981886 . T . PASS END=981886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 981887 . C . PASS END=981893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 981894 . G . PASS END=981895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 981896 . A . PASS END=981905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 981906 . G . PASS END=981909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 981910 . G . PASS END=981913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 981914 . A . PASS END=981914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 981915 . C . PASS END=981918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 981919 . T . PASS END=981919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr1 981920 . C . PASS END=981922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 981923 . C . PASS END=981927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 981928 . A . PASS END=981930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 981931 . A G, 95.14 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,10,0:0,6,0:45:133,48,0,594,48,601:255,48,0:0,0:9.5145e+01,4.5145e+01,1.3280e-04,4.5000e+02,7.9919e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,7:0,0,9,7 chr1 981932 . C . PASS END=981938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 981939 . G . PASS END=981939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 981940 . G . PASS END=981968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:18,0 chr1 981969 . T . PASS END=981976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 981977 . G . PASS END=981988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 981989 . C . PASS END=981990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,696:0,44,255:19,0 chr1 981991 . C . PASS END=982006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 982007 . C . PASS END=982007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 982008 . C . PASS END=982018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,864:0,69,255:26,0 chr1 982019 . C . PASS END=982031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 982032 . C . PASS END=982043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:26,0 chr1 982044 . C . PASS END=982049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 982050 . G . PASS END=982074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 982075 . A . PASS END=982115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:19,0 chr1 982121 . C . PASS END=982121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 982200 . G . PASS END=982208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:24,0 chr1 982209 . C . PASS END=982209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 982210 . C . PASS END=982232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,832:0,62,255:26,0 chr1 982233 . C . PASS END=982240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 982241 . C . PASS END=982241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 982242 . C . PASS END=982242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 982243 . A . PASS END=982243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 982244 . C . PASS END=982252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1225:0,96,255:34,0 chr1 982253 . A . PASS END=982253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:32,0 chr1 982254 . G . PASS END=982306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,86,255:36,0 chr1 982307 . T . PASS END=982337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,833:0,61,255:26,0 chr1 982704 . C . PASS END=982704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 982707 . C . PASS END=982708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 982709 . A . PASS END=982711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 982712 . A . PASS END=982713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1046:0,74,255:29,0 chr1 982714 . G . PASS END=982754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:31:0,86,1247:0,86,255:40,0 chr1 982755 . A . PASS END=982755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1434:0,46,255:39,0 chr1 982756 . G . PASS END=982822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:36:0,89,1250:0,89,255:40,0 chr1 982823 . A . PASS END=982823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:32,0 chr1 982824 . T . PASS END=982829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 982830 . G . PASS END=982832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:25,0 chr1 982833 . C . PASS END=982833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 982834 . C . PASS END=982834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:25,0 chr1 982953 . C . PASS END=982967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 982968 . C . PASS END=982969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 982970 . G . PASS END=982972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 982973 . T . PASS END=982975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 982976 . A . PASS END=982976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr1 982977 . G . PASS END=982993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 982994 . T C, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,5,0:0,7,0:33:121,36,0,465,36,465:255,39,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,9:0,0,6,6 chr1 982995 . C . PASS END=983003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 983004 . C . PASS END=983004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 983005 . G . PASS END=983006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 983007 . T . PASS END=983007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 983008 . T . PASS END=983008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 983009 . G . PASS END=983009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 983010 . C . PASS END=983011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 983012 . G . PASS END=983012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 983013 . G . PASS END=983013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 983014 . A . PASS END=983026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr1 983027 . C . PASS END=983027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 983028 . A . PASS END=983031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 983032 . C . PASS END=983033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 983034 . G . PASS END=983040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 983041 . C . PASS END=983041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 983042 . C . PASS END=983042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 983043 . A . PASS END=983043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:11,0 chr1 983044 . T . PASS END=983044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 983045 . T . PASS END=983045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:11,0 chr1 983046 . G . PASS END=983067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 983156 . C . PASS END=983160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 983161 . G . PASS END=983177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 983178 . C . PASS END=983194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 983195 . T . PASS END=983195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 983196 . C . PASS END=983220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 983221 . C . PASS END=983221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 983222 . G . PASS END=983222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr1 983223 . G . PASS END=983251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 983252 . A . PASS END=983252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 983253 . G . PASS END=983254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 983255 . A . PASS END=983255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 983256 . C . PASS END=983257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 983258 . T . PASS END=983258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 983259 . G . PASS END=983275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 983386 . C . PASS END=983386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 983392 . A . PASS END=983392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 983393 . C . PASS END=983404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr1 983405 . G . PASS END=983431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:24,0 chr1 983432 . C . PASS END=983432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr1 983433 . A . PASS END=983434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 983435 . T . PASS END=983435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:21,0 chr1 983436 . G . PASS END=983444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 983445 . G . PASS END=983446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 983447 . C . PASS END=983449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,930:0,72,255:24,0 chr1 983450 . G . PASS END=983450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 983451 . G . PASS END=983456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,872:0,64,255:26,0 chr1 983457 . G . PASS END=983458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 983459 . C . PASS END=983516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,870:0,61,255:25,0 chr1 983517 . C . PASS END=983517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 983518 . A . PASS END=983522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 983523 . A . PASS END=983537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 983538 . A . PASS END=983548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,950:0,70,255:26,0 chr1 983549 . A . PASS END=983549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,762:0,45,255:23,0 chr1 983550 . G . PASS END=983558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,880:0,64,255:26,0 chr1 983559 . A . PASS END=983559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,868:0,48,255:23,0 chr1 983560 . C . PASS END=983562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 983563 . G . PASS END=983573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,970:0,67,255:26,0 chr1 983574 . A . PASS END=983574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:22,0 chr1 983575 . C . PASS END=983578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,67,255:22,0 chr1 983579 . T . PASS END=983579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,770:0,23,255:21,0 chr1 983580 . G . PASS END=983589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 983590 . G . PASS END=983590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 983591 . T . PASS END=983592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 983593 . T . PASS END=983593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 983594 . G . PASS END=983597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 983598 . G . PASS END=983598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 983599 . G . PASS END=983610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 983611 . C . PASS END=983611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 983612 . G . PASS END=983612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 983613 . G . PASS END=983613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 983614 . C . PASS END=983617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 983618 . C . PASS END=983618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 983619 . C . PASS END=983619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 983620 . A . PASS END=983620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,684:0,19,255:19,0 chr1 983621 . G . PASS END=983621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:20,0 chr1 983622 . C . PASS END=983622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 983623 . A . PASS END=983624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr1 983625 . C . PASS END=983626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 983627 . T . PASS END=983628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,821:0,55,255:22,0 chr1 983629 . C . PASS END=983629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 983630 . A . PASS END=983630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 983631 . A . PASS END=983636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 983637 . T . PASS END=983637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 983638 . G . PASS END=983651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr1 983652 . T . PASS END=983659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 983660 . C . PASS END=983660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:18,0 chr1 983661 . G . PASS END=983663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 983664 . G . PASS END=983665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 983666 . G . PASS END=983666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:12,0 chr1 983667 . A . PASS END=983669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,43,255:13,0 chr1 983670 . T . PASS END=983671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 983672 . C . PASS END=983712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 983713 . C . PASS END=983736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,266:0,24,255:8,0 chr1 983737 . G . PASS END=983737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 983738 . T . PASS END=983745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:7,0 chr1 984247 . T . PASS END=984247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 984248 . G . PASS END=984256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 984257 . C . PASS END=984259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 984260 . T . PASS END=984264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,630:0,40,255:17,0 chr1 984265 . C . PASS END=984271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:19,0 chr1 984272 . C . PASS END=984283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,678:0,60,255:23,0 chr1 984284 . C . PASS END=984284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 984285 . T . PASS END=984297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 984298 . C . PASS END=984301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 984302 . T C, 137.29 PASS DP=31;MQ=249.48;FractionInformativeReads=0.968 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,13,0:0,17,0:87:175,90,0,1155,90,1155:255,90,0:0,0:1.3729e+02,8.7289e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,18:0,0,11,19 chr1 984303 . C . PASS END=984310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 984311 . C . PASS END=984311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 984312 . T . PASS END=984329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 984330 . G . PASS END=984339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 984340 . T . PASS END=984357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr1 984358 . A . PASS END=984358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 984359 . G . PASS END=984363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 984364 . T . PASS END=984386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 984387 . C . PASS END=984407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 984408 . T . PASS END=984408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:10,0 chr1 984409 . T . PASS END=984411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 984412 . C . PASS END=984413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr1 984414 . C . LowGQ END=984414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:7,0 chr1 984415 . T . PASS END=984420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 984421 . A . PASS END=984426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:7,0 chr1 984427 . G . PASS END=984432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr1 984433 . A . PASS END=984439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:6:0,9,135:0,18,217:3,0 chr1 984616 . G . PASS END=984673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,166:0,15,166:6,0 chr1 984674 . C . PASS END=984692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 984693 . T . PASS END=984693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 984694 . G . PASS END=984696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 984697 . C . PASS END=984699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 984700 . G . PASS END=984700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 984701 . C . PASS END=984710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 984711 . G . PASS END=984711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 984712 . G . PASS END=984725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:12,0 chr1 984726 . T . PASS END=984726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 984727 . G . PASS END=984729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 984730 . T . PASS END=984730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 984731 . G . PASS END=984732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,380:0,33,255:12,0 chr1 984733 . T . PASS END=984733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 984734 . G . PASS END=984741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 984742 . T . LowGQ END=984744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,316:0,0,255:9,0 chr1 984745 . T . PASS END=984745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 984746 . C . PASS END=984749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 984750 . G . PASS END=984750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,341:0,6,255:10,0 chr1 984751 . C . PASS END=984755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,433:0,36,255:12,0 chr1 984756 . G . PASS END=984756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 984757 . T . PASS END=984759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 984760 . C . PASS END=984764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 984765 . G . PASS END=984765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 984766 . C . PASS END=984774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr1 984775 . C . PASS END=984775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 984776 . C . PASS END=984797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,513:0,45,255:16,0 chr1 984798 . T . PASS END=984798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 984799 . T . PASS END=984807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:15,0 chr1 984808 . C . PASS END=984808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 984809 . G . PASS END=984811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 984812 . C . PASS END=984813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 984814 . C . PASS END=984826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,553:0,48,255:16,0 chr1 984827 . G . PASS END=984831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,540:0,31,255:12,0 chr1 984946 . G . PASS END=985001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,435:0,36,255:13,0 chr1 985002 . A . PASS END=985007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 985008 . A . PASS END=985008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 985009 . C . PASS END=985012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 985013 . C . PASS END=985025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 985026 . T . PASS END=985026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 985027 . T . PASS END=985031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 985032 . T . PASS END=985032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:11,0 chr1 985033 . T . PASS END=985033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 985034 . G . PASS END=985055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 985056 . G . PASS END=985057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 985058 . T . PASS END=985060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 985061 . G . PASS END=985064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 985065 . T . PASS END=985065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:13,0 chr1 985066 . G . PASS END=985079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:17,0 chr1 985080 . A . PASS END=985080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 985081 . C . PASS END=985082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 985083 . A . PASS END=985088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 985089 . G . PASS END=985092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 985093 . G . PASS END=985097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 985098 . A . PASS END=985098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 985099 . C . PASS END=985115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,828:0,61,255:26,0 chr1 985116 . C . PASS END=985130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,987:0,81,255:29,0 chr1 985131 . T . PASS END=985131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 985132 . G . PASS END=985143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1219:0,87,255:33,0 chr1 985144 . G . PASS END=985144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr1 985145 . T . PASS END=985150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 985151 . T . PASS END=985151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:32,0 chr1 985152 . G . PASS END=985175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1236:0,89,255:35,0 chr1 985235 . C . PASS END=985235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 985283 . G . PASS END=985303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,120,1800:0,122,255:40,0 chr1 985304 . A . PASS END=985374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,81,255:40,0 chr1 985375 . T . PASS END=985376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:25,0 chr1 985377 . C . PASS END=985378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1215:0,82,255:27,0 chr1 985379 . A . PASS END=985379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr1 985380 . G . PASS END=985380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 985381 . T . PASS END=985393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 985394 . G . PASS END=985394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:22,0 chr1 985395 . T . PASS END=985397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:23,0 chr1 985398 . G . PASS END=985398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:21,0 chr1 985399 . G . PASS END=985400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:22,0 chr1 985401 . C . PASS END=985403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 985404 . C . PASS END=985404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 985405 . T . PASS END=985405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,793:0,36,255:19,0 chr1 985406 . T . PASS END=985406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 985407 . C . PASS END=985407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:19,0 chr1 985408 . T . PASS END=985411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:25:0,44,855:0,44,255:19,0 chr1 985412 . A . PASS END=985414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:33:24:0,33,746:0,33,255:18,0 chr1 985415 . C . PASS END=985416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:22:0,25,670:0,25,255:16,0 chr1 985417 . G . PASS END=985417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:15,0 chr1 985421 . G . PASS END=985421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,782:0,30,255:13,0 chr1 985613 . C . PASS END=985709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:38:0,101,1426:0,101,255:40,0 chr1 985712 . C . PASS END=985712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:36,0 chr1 985714 . G . PASS END=985714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 985807 . G . PASS END=985810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 985811 . A . PASS END=985813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,774:0,53,255:20,0 chr1 985814 . A . PASS END=985822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 985823 . G . PASS END=985823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 985824 . A . PASS END=985855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:24,0 chr1 985856 . C . PASS END=985856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 985857 . T . PASS END=985860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,886:0,72,255:25,0 chr1 985861 . G . PASS END=985867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 985868 . A . PASS END=985868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:27,0 chr1 985869 . A . PASS END=985879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr1 985880 . A . PASS END=985880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 985881 . C . PASS END=985883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 985884 . A . PASS END=985884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 985885 . C . PASS END=985888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 985889 . A . PASS END=985889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 985890 . A . PASS END=985898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 985899 . T . PASS END=985911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:23,0 chr1 985912 . A . PASS END=985912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 985913 . C . PASS END=985925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:22,0 chr1 985926 . G . PASS END=985928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 985929 . T . PASS END=985933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 985934 . T . PASS END=985934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 985935 . T . PASS END=985940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 985941 . A . PASS END=985942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 985943 . G . PASS END=985947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 985948 . G . PASS END=985948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 985949 . G . PASS END=985950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 985951 . C . PASS END=985971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:17:0,47,615:0,47,255:19,0 chr1 986097 . C . PASS END=986097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 986106 . G . PASS END=986106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 986107 . A . PASS END=986107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 986108 . G . PASS END=986108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:22,0 chr1 986109 . C . PASS END=986112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 986113 . G . PASS END=986113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 986114 . A . PASS END=986116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr1 986117 . C . PASS END=986118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:23,0 chr1 986119 . G . PASS END=986119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,814:0,28,255:23,0 chr1 986120 . T . PASS END=986121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 986122 . A . PASS END=986128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,856:0,61,255:26,0 chr1 986129 . G . PASS END=986129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:23,0 chr1 986130 . A . PASS END=986130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 986131 . G . PASS END=986131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:25,0 chr1 986132 . C . PASS END=986132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 986133 . C . PASS END=986133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:24,0 chr1 986134 . T . PASS END=986135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr1 986136 . G . PASS END=986136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:26,0 chr1 986137 . A . PASS END=986137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 986138 . C . PASS END=986143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,955:0,67,255:25,0 chr1 986144 . T . PASS END=986144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,862:0,54,255:24,0 chr1 986145 . C . PASS END=986148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,1002:0,70,255:26,0 chr1 986149 . C . PASS END=986149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 986150 . T . PASS END=986150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 986151 . G . PASS END=986151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 986152 . G . PASS END=986152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:28,0 chr1 986153 . A . PASS END=986153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 986154 . G . PASS END=986175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:29,0 chr1 986176 . C . PASS END=986193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 986194 . C . PASS END=986194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:21,0 chr1 986195 . C . PASS END=986195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:21,0 chr1 986196 . C . PASS END=986198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 986199 . T . PASS END=986199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 986200 . G . PASS END=986205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 986206 . G . PASS END=986206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:21,0 chr1 986207 . G . PASS END=986211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 986212 . T . PASS END=986217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,775:0,50,255:19,0 chr1 986412 . A . PASS END=986412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 986413 . A . PASS END=986413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 986414 . A . PASS END=986419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 986420 . C . PASS END=986423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 986633 . G . PASS END=986635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 986636 . C . PASS END=986636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 986637 . C . PASS END=986640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 986641 . C . PASS END=986664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 986665 . G . PASS END=986678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,590:0,45,255:16,0 chr1 986679 . G . PASS END=986681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 986682 . C . PASS END=986702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,596:0,48,255:16,0 chr1 986703 . C . PASS END=986703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 986704 . C . PASS END=986749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,613:0,40,255:19,0 chr1 986833 . G . PASS END=986833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 986834 . T . PASS END=986834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:21,0 chr1 986835 . C . PASS END=986836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 986837 . C . PASS END=986837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 986838 . C . PASS END=986839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 986840 . T . PASS END=986840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 986841 . C . PASS END=986841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 986842 . G . PASS END=986842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 986843 . G . PASS END=986845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 986846 . G . PASS END=986846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 986847 . C . PASS END=986849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 986850 . C . PASS END=986851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 986852 . A . PASS END=986857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 986858 . T . PASS END=986858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:20,0 chr1 986859 . G . PASS END=986860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 986861 . C . PASS END=986861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 986862 . C . PASS END=986870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 986871 . C . PASS END=986871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 986872 . G . PASS END=986879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:22,0 chr1 986880 . G . PASS END=986880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 986881 . C . PASS END=986883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 986884 . G . PASS END=986884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 986885 . T . PASS END=986885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 986886 . G . PASS END=986886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 986887 . G . PASS END=986888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,930:0,72,255:24,0 chr1 986889 . C . PASS END=986889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 986890 . G . PASS END=986890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 986891 . T . PASS END=986891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 986892 . C . PASS END=986894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 986895 . G . PASS END=986895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 986896 . T . PASS END=986900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 986901 . T . PASS END=986901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 986902 . G . PASS END=986903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 986904 . A . PASS END=986906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:22,0 chr1 986907 . T . PASS END=986909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 986910 . C . PASS END=986910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 986911 . C . PASS END=986915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 986916 . C . PASS END=986916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 986917 . A . PASS END=986917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 986918 . C . PASS END=986918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:20,0 chr1 986919 . C . PASS END=986919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 986920 . C . PASS END=986925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 986926 . T . PASS END=986928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 986929 . G . PASS END=986931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 986932 . C . PASS END=986934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,806:0,53,255:19,0 chr1 986935 . C . PASS END=986935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 986936 . C . PASS END=986999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,543:0,42,255:19,0 chr1 987000 . A . PASS END=987001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 987002 . T . PASS END=987003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 987004 . T . PASS END=987006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 987007 . G . PASS END=987025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:16,0 chr1 987108 . G . PASS END=987110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 987111 . T . PASS END=987111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 987112 . G . PASS END=987124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 987125 . G . PASS END=987125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 987126 . C . PASS END=987134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 987135 . T . PASS END=987135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 987136 . G . PASS END=987140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:26,0 chr1 987141 . C . PASS END=987141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 987142 . C . PASS END=987142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 987143 . T . PASS END=987143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr1 987144 . T . PASS END=987159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,903:0,62,255:26,0 chr1 987160 . G . PASS END=987161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 987162 . C . PASS END=987162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 987163 . C . PASS END=987166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 987167 . G . PASS END=987167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 987168 . T . PASS END=987172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 987173 . T . PASS END=987195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,823:0,69,255:23,0 chr1 987373 . C . PASS END=987374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 987375 . A . PASS END=987375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 987376 . A . PASS END=987382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 987383 . A . PASS END=987383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 987384 . A . PASS END=987384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:17,0 chr1 987385 . T . PASS END=987396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 988841 . C . PASS END=988873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,953:0,65,255:25,0 chr1 989133 . C . PASS END=989135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 989136 . G . PASS END=989136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 989137 . A . PASS END=989161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,731:0,63,255:26,0 chr1 989162 . A . PASS END=989189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:29,0 chr1 989190 . G . PASS END=989191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 989192 . G . PASS END=989195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 989196 . G . PASS END=989199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 989200 . C . PASS END=989229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 989230 . G . PASS END=989233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 989234 . A . PASS END=989236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 989237 . T . PASS END=989289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,876:0,63,255:26,0 chr1 989290 . C . PASS END=989302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:19,0 chr1 989303 . T . PASS END=989312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr1 989313 . C . PASS END=989315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 989316 . G . PASS END=989316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 989317 . C . PASS END=989324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 989325 . C . PASS END=989325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 989326 . A . PASS END=989329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 989330 . A . PASS END=989330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,425:0,25,255:12,0 chr1 989331 . C . PASS END=989353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 989354 . A . PASS END=989354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 989355 . T . PASS END=989357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 989828 . G . PASS END=989854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,527:0,42,255:19,0 chr1 989855 . G . PASS END=989856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 989857 . G . PASS END=989863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,735:0,47,255:19,0 chr1 989864 . G . PASS END=989864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 989865 . G . PASS END=989866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 989867 . C . PASS END=989867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 989868 . C . PASS END=989876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 989877 . G . PASS END=989877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 989878 . G . PASS END=989909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,886:0,69,255:24,0 chr1 989910 . A . PASS END=989910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 989911 . C . PASS END=989913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 989914 . A . PASS END=989931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 990204 . G . PASS END=990220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,808:0,62,255:26,0 chr1 990221 . C . PASS END=990226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 990227 . G . PASS END=990227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 990228 . G . PASS END=990232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 990233 . G . PASS END=990233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 990234 . C . PASS END=990234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 990235 . A . PASS END=990236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 990237 . T . PASS END=990238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 990239 . C . PASS END=990240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 990241 . C . PASS END=990242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 990243 . A . PASS END=990249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1249:0,93,255:35,0 chr1 990250 . C . PASS END=990250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:34,0 chr1 990251 . G . PASS END=990279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1386:0,98,255:37,0 chr1 990280 . C T, 161.37 PASS DP=38;MQ=249.62;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,18,0:0,20,0:111:199,114,0,1471,114,1471:255,114,0:0,0:1.6137e+02,1.1137e+02,0.0000e+00,4.5000e+02,1.4614e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,24:0,0,18,20 chr1 990281 . G . PASS END=990292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:35:0,96,1440:0,105,255:34,0 chr1 990293 . C . PASS END=990293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:32,0 chr1 990294 . G . PASS END=990302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:29,0 chr1 990303 . T . PASS END=990303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:29,0 chr1 990304 . G . PASS END=990317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:86:30:0,86,1125:0,86,255:30,0 chr1 990318 . A . PASS END=990332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1141:0,90,255:31,0 chr1 990333 . C . PASS END=990338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 990339 . T . PASS END=990339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr1 990340 . G . PASS END=990340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 990341 . C . PASS END=990341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:22,0 chr1 990342 . G . PASS END=990342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 990343 . G . PASS END=990348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,56,255:19,0 chr1 990349 . C . PASS END=990349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 990350 . C . PASS END=990360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:47:21:0,47,720:0,47,255:19,0 chr1 990361 . A . PASS END=990361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:16,0 chr1 990757 . G . PASS END=990772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:33,0 chr1 990773 . C T, 145.84 PASS DP=33;MQ=247.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,20,0:0,13,0:96:184,99,0,1232,99,1232:255,99,0:0,0:1.4584e+02,9.5841e+01,0.0000e+00,4.5000e+02,1.3061e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,14:0,0,20,13 chr1 990774 . A . PASS END=990774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 990775 . T . PASS END=990775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:30,0 chr1 990776 . T . PASS END=990779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1255:0,86,255:31,0 chr1 1001946 . C . PASS END=1001954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 1001955 . C . PASS END=1001956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 1001957 . G . PASS END=1001957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1001958 . C . PASS END=1002035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,520:0,41,255:19,0 chr1 1002036 . A . PASS END=1002041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 1002042 . C . PASS END=1002042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 1002043 . T . PASS END=1002043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 1002044 . T . PASS END=1002055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,653:0,43,255:19,0 chr1 1002056 . C . PASS END=1002057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1002058 . G . PASS END=1002058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 1002059 . A . PASS END=1002060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1002061 . G . PASS END=1002062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 1002063 . C . PASS END=1002079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,786:0,66,255:24,0 chr1 1002080 . G . PASS END=1002080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 1002081 . G . PASS END=1002142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,900:0,62,255:24,0 chr1 1002143 . A . PASS END=1002172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:16:0,40,643:0,40,255:19,0 chr1 1002173 . C . PASS END=1002173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 1002174 . A . PASS END=1002178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1003178 . C . PASS END=1003213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 1003214 . G . PASS END=1003214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 1003215 . T . PASS END=1003223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 1003224 . C . PASS END=1003224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 1003225 . A . PASS END=1003235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 1003236 . A . PASS END=1003236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 1003237 . A . PASS END=1003238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1003239 . G . PASS END=1003239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 1003240 . C . PASS END=1003242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1003243 . T . PASS END=1003243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 1003244 . C . PASS END=1003255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr1 1003256 . A . PASS END=1003256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 1003257 . G . PASS END=1003260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,488:0,39,255:13,0 chr1 1003261 . T . PASS END=1003261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 1003262 . T . PASS END=1003270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 1003271 . G . PASS END=1003282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 1003283 . C . PASS END=1003291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 1003292 . A . PASS END=1003308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 1003309 . C . PASS END=1003313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:7:0,18,270:0,21,249:6,0 chr1 1004687 . C . PASS END=1004700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:26,0 chr1 1004701 . G . PASS END=1004701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:25,0 chr1 1004702 . C . PASS END=1004711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 1004712 . G . PASS END=1004785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1024:0,80,255:34,0 chr1 1004786 . T . PASS END=1004786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 1004787 . G . PASS END=1004799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 1004800 . T . PASS END=1004894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,909:0,65,255:26,0 chr1 1004895 . C . PASS END=1004896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 1004897 . G . PASS END=1004902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 1004903 . A . PASS END=1004919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,759:0,47,255:19,0 chr1 1004920 . G . PASS END=1004956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 1004957 . G A, 109.74 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,11,0:0,10,0:60:148,63,0,782,63,782:255,63,0:0,0:1.0974e+02,5.9744e+01,4.6595e-06,4.5000e+02,9.4514e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,14:0,0,7,14 chr1 1004958 . T . PASS END=1004979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 1004980 . G A, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,9,0:0,11,0:57:145,60,0,767,60,767:255,60,0:0,0:1.0719e+02,5.7191e+01,8.2835e-06,4.5000e+02,9.1961e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,9:0,0,12,8 chr1 1004981 . C . PASS END=1004986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 1004987 . G . PASS END=1004995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 1004996 . A . PASS END=1004996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 1004997 . G . PASS END=1004998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 1004999 . C . PASS END=1004999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 1005000 . C . PASS END=1005008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:23,0 chr1 1005009 . C . PASS END=1005009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 1005010 . G . PASS END=1005017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 1005018 . G . PASS END=1005022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:24,0 chr1 1005023 . T . PASS END=1005023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 1005024 . G . PASS END=1005027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 1005028 . A . PASS END=1005028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 1005029 . G . PASS END=1005038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 1005039 . T . PASS END=1005039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 1005040 . C . PASS END=1005100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 1005101 . G . PASS END=1005101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 1005102 . G . PASS END=1005148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:22:0,61,837:0,61,255:26,0 chr1 1005149 . G . PASS END=1005150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1005151 . C . PASS END=1005168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 1005169 . G . PASS END=1005190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1119:0,87,255:32,0 chr1 1005191 . G . PASS END=1005191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:30,0 chr1 1005192 . G . PASS END=1005212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:32:0,85,1164:0,85,255:33,0 chr1 1005213 . T . PASS END=1005213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:31,0 chr1 1005214 . G . PASS END=1005242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1194:0,83,255:35,0 chr1 1005243 . T . PASS END=1005243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:31,0 chr1 1005244 . C . PASS END=1005254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:32,0 chr1 1005255 . G . PASS END=1005258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,83,255:26,0 chr1 1005259 . C . PASS END=1005263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1005264 . G . PASS END=1005266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1005267 . T . PASS END=1005272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1005273 . C . PASS END=1005276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 1005277 . G . PASS END=1005286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1005287 . G . PASS END=1005307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:23,0 chr1 1005308 . G . PASS END=1005308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 1005309 . T . PASS END=1005315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 1005316 . C . PASS END=1005316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 1005317 . C . PASS END=1005317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1005318 . G . PASS END=1005318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:19,0 chr1 1005319 . G . PASS END=1005320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1005321 . C . PASS END=1005325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 1007197 . C . PASS END=1007198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1007199 . A . PASS END=1007200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 1007201 . T . PASS END=1007202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1007203 . A G, 85.67 PASS DP=15;MQ=250.00;FractionInformativeReads=0.867 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,7,0:0,6,0:36:123,39,0,474,39,474:255,42,0:0,0:8.5668e+01,3.5668e+01,1.1780e-03,4.5000e+02,7.0438e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,3:0,0,6,7 chr1 1007204 . T . PASS END=1007204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr1 1007205 . C . PASS END=1007212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 1007213 . G . PASS END=1007218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1007219 . A . PASS END=1007219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 1007220 . G . PASS END=1007232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:18,0 chr1 1007233 . T . PASS END=1007233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr1 1007234 . G . PASS END=1007240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 1007241 . T . PASS END=1007244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,599:0,43,255:17,0 chr1 1007245 . C . PASS END=1007247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,510:0,21,255:18,1 chr1 1007248 . G . PASS END=1007250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 1007251 . C . PASS END=1007251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:17,0 chr1 1007252 . C . PASS END=1007252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,596:0,5,255:17,2 chr1 1007253 . G . PASS END=1007253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr1 1007254 . G . PASS END=1007259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 1007260 . C . PASS END=1007268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:22,0 chr1 1007269 . G . PASS END=1007270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 1007271 . A . PASS END=1007275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 1007276 . A . PASS END=1007276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 1007277 . G . PASS END=1007278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1007279 . T . PASS END=1007279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,748:0,41,255:22,0 chr1 1007280 . T . PASS END=1007289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,801:0,72,255:24,0 chr1 1007290 . G . PASS END=1007290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 1007291 . A . PASS END=1007312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 1007313 . G . PASS END=1007313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1007314 . T . PASS END=1007323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,77,255:26,0 chr1 1007324 . A . PASS END=1007334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 1007335 . C . PASS END=1007335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 1007336 . A . PASS END=1007394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1024:0,81,255:31,0 chr1 1007395 . C . PASS END=1007405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1007406 . G . PASS END=1007407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1007408 . C . PASS END=1007408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:27,2 chr1 1007409 . G . PASS END=1007409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1088:0,30,255:27,2 chr1 1007410 . G . PASS END=1007410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:28,0 chr1 1007411 . G . PASS END=1007415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 1007416 . A . PASS END=1007417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1007418 . G . PASS END=1007419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1007420 . T . PASS END=1007431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1063:0,74,255:26,0 chr1 1007432 . G A, 130.80 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,15,0:0,13,0:81:169,84,0,1040,84,1040:255,84,0:0,0:1.3080e+02,8.0805e+01,0.0000e+00,4.5000e+02,1.1557e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,13:0,0,18,10 chr1 1007433 . C . PASS END=1007436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1007437 . C . PASS END=1007437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr1 1007438 . G . PASS END=1007469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 1007470 . G . PASS END=1007479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1007480 . C . PASS END=1007490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:19,0 chr1 1007491 . G . PASS END=1007492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 1007493 . C . PASS END=1007522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 1007523 . G . PASS END=1007536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,825:0,66,255:23,0 chr1 1007537 . A . PASS END=1007537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 1007538 . G . PASS END=1007551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 1007552 . T . PASS END=1007552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,827:0,56,255:21,0 chr1 1007553 . C . PASS END=1007553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1007554 . A . PASS END=1007554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 1007555 . C . PASS END=1007561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,886:0,61,255:25,0 chr1 1007562 . A . PASS END=1007562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr1 1007563 . A . PASS END=1007566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,808:0,61,255:25,0 chr1 1007567 . G . PASS END=1007567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:23,0 chr1 1007568 . C . PASS END=1007573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:24,0 chr1 1007574 . T . PASS END=1007574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:22,0 chr1 1007575 . C . PASS END=1007577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:24,0 chr1 1007578 . G . PASS END=1007580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 1007581 . C . PASS END=1007581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:24,0 chr1 1007582 . T . PASS END=1007582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:23,0 chr1 1007583 . G . PASS END=1007592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 1007593 . G . PASS END=1007593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 1007594 . C . PASS END=1007620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:23:0,63,831:0,64,255:26,0 chr1 1007621 . G . PASS END=1007621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 1007622 . G . PASS END=1007622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 1007623 . C . PASS END=1007627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,902:0,75,255:25,0 chr1 1007628 . C . PASS END=1007628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,800:0,6,255:22,0 chr1 1007629 . G . PASS END=1007629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1007630 . G . PASS END=1007631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1007632 . C . PASS END=1007632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 1007633 . G . PASS END=1007633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1007634 . T . PASS END=1007634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,892:0,18,255:26,0 chr1 1007635 . G . PASS END=1007635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 1007636 . G . PASS END=1007638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 1007639 . T . PASS END=1007640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:70:29:0,70,1000:0,70,255:28,0 chr1 1007641 . C . PASS END=1007641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:28,0 chr1 1007642 . C . PASS END=1007648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 1007649 . A . PASS END=1007649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr1 1007650 . G . PASS END=1007663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1225:0,86,255:33,0 chr1 1007664 . C . PASS END=1007664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:31,0 chr1 1007665 . C . PASS END=1007670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1272:0,81,255:33,0 chr1 1007671 . A . PASS END=1007671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1194:0,53,255:32,0 chr1 1007672 . C . PASS END=1007675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1227:0,88,255:35,0 chr1 1007676 . G . PASS END=1007676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:35,0 chr1 1007677 . G . PASS END=1007813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1218:0,83,255:40,0 chr1 1007814 . C . PASS END=1007847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 1007848 . G . PASS END=1007848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 1007849 . C . PASS END=1007851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 1007852 . C . PASS END=1007852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 1007853 . C . PASS END=1007886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 1007887 . G . PASS END=1007887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 1007888 . G . PASS END=1007896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 1007897 . C . PASS END=1007924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr1 1007925 . A . PASS END=1007925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 1007926 . C . PASS END=1007926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1007927 . A . PASS END=1007927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr1 1007928 . C . PASS END=1007928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1007929 . C . PASS END=1007929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:13,0 chr1 1007930 . T . PASS END=1007936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,604:0,48,255:16,0 chr1 1007937 . C . PASS END=1007945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,31,255:11,0 chr1 1007946 . T . PASS END=1007946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 1018273 . T . PASS END=1018279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,684:0,54,255:19,0 chr1 1018280 . T . PASS END=1018285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:23,0 chr1 1018286 . A . PASS END=1018286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 1018287 . T . PASS END=1018303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:25,0 chr1 1018304 . A . PASS END=1018304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 1018305 . A . PASS END=1018311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 1018312 . G . PASS END=1018312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 1018313 . G . PASS END=1018319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,945:0,75,255:25,0 chr1 1018320 . T . PASS END=1018321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 1018322 . G . PASS END=1018330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 1018331 . A . PASS END=1018331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 1018332 . G . PASS END=1018367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:24,0 chr1 1019290 . C . PASS END=1019386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:34,0 chr1 1019387 . T . PASS END=1019387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1019388 . G . PASS END=1019404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1200:0,83,255:29,0 chr1 1019405 . A . PASS END=1019405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 1019406 . G . PASS END=1019410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 1019411 . A . PASS END=1019411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 1019412 . G . PASS END=1019421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,89,255:30,0 chr1 1019422 . G . PASS END=1019422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr1 1019423 . T . PASS END=1019423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1019424 . C . PASS END=1019455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,930:0,66,255:24,0 chr1 1019456 . A . PASS END=1019456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 1019457 . G . PASS END=1019458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1019459 . C . PASS END=1019459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 1019460 . C . PASS END=1019463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1019464 . C . PASS END=1019473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,670:0,46,255:19,0 chr1 1019474 . A . PASS END=1019474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,568:0,27,255:15,0 chr1 1019475 . C . PASS END=1019495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,659:0,41,255:18,0 chr1 1019496 . C . PASS END=1019498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1019499 . G . PASS END=1019499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:11,0 chr1 1019500 . G . PASS END=1019504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:16,0 chr1 1019505 . A . PASS END=1019505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,572:0,24,255:13,0 chr1 1019506 . A . PASS END=1019509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:15,0 chr1 1019510 . G . PASS END=1019510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 1019511 . G . PASS END=1019511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1019512 . G . PASS END=1019512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 1019513 . C . PASS END=1019513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1019514 . G . PASS END=1019514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,496:0,1,255:12,0 chr1 1019515 . G . PASS END=1019515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 1019516 . G . PASS END=1019518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 1019519 . G . PASS END=1019519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 1019520 . G . PASS END=1019521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1019522 . G . PASS END=1019523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 1019524 . C . PASS END=1019525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1019526 . C . PASS END=1019526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 1019527 . C . PASS END=1019527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1019528 . G . PASS END=1019532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1019533 . A . PASS END=1019536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 1019537 . C . PASS END=1019537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:16,0 chr1 1019538 . A . PASS END=1019539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 1019540 . C . PASS END=1019540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 1019541 . T . PASS END=1019618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:19,0 chr1 1019619 . G . PASS END=1019637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,837:0,66,255:22,0 chr1 1019638 . G . PASS END=1019640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 1019641 . A . PASS END=1019646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1019647 . A . PASS END=1019647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:16:24:0,16,662:0,16,255:21,0 chr1 1019648 . C . PASS END=1019667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:23,0 chr1 1019668 . C . PASS END=1019668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 1019669 . A . PASS END=1019671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1019672 . G . PASS END=1019674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 1019675 . C . PASS END=1019688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,878:0,69,255:24,0 chr1 1019689 . C . PASS END=1019689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 1019690 . A . PASS END=1019724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 1019725 . G . PASS END=1019726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1019727 . T . PASS END=1019729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1019730 . T . PASS END=1019737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 1019738 . G . PASS END=1019738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 1019739 . A . PASS END=1019739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1019740 . C . PASS END=1019740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 1019741 . T . PASS END=1019763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:30:0,85,1166:0,85,255:35,0 chr1 1019861 . G . PASS END=1019862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1019863 . C . PASS END=1019863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 1019864 . T . PASS END=1019869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1019870 . A . PASS END=1019886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,71,255:26,0 chr1 1021258 . C . PASS END=1021377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1242:0,91,255:40,0 chr1 1021378 . C . PASS END=1021386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 1021387 . G . PASS END=1021387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 1021388 . A . PASS END=1021392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 1022519 . C . PASS END=1022550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,807:0,66,255:24,0 chr1 1022551 . C . PASS END=1022551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 1022552 . T . PASS END=1022559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1022560 . G . PASS END=1022564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 1022565 . T . PASS END=1022570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1022571 . A . PASS END=1022571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 1022572 . C . PASS END=1022572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 1022573 . C . PASS END=1022584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 1022882 . A . PASS END=1022900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:26,0 chr1 1022901 . G . PASS END=1022910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 1022911 . G . PASS END=1022932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr1 1022933 . G . PASS END=1022941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:29,0 chr1 1022942 . T . PASS END=1022942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 1022943 . G . PASS END=1022953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1022954 . C . PASS END=1022959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1022960 . T . PASS END=1022964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1022965 . C . PASS END=1022969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 1022970 . G . PASS END=1022970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:22,0 chr1 1022971 . T . PASS END=1022977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:23,0 chr1 1025733 . C . PASS END=1025808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,102,1574:0,102,255:40,0 chr1 1026256 . G . PASS END=1026260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 1026261 . G . PASS END=1026268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1026269 . G . PASS END=1026269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 1026270 . C . PASS END=1026275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 1026276 . C . PASS END=1026276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:28,0 chr1 1026277 . C . PASS END=1026287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:30,0 chr1 1026288 . G . PASS END=1026288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 1026289 . C . PASS END=1026293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1026294 . T . PASS END=1026294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:25,0 chr1 1026295 . G . PASS END=1026295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 1026296 . G . PASS END=1026297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1026298 . C . PASS END=1026299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:25,0 chr1 1026300 . G . PASS END=1026301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 1026302 . C . PASS END=1026303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 1026304 . T . PASS END=1026305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,1017:0,51,255:27,1 chr1 1026306 . G . PASS END=1026306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1039:0,38,255:27,0 chr1 1026307 . G . PASS END=1026311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 1026312 . T . PASS END=1026363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,837:0,65,255:26,0 chr1 1026530 . C . PASS END=1026534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1026535 . C . PASS END=1026574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:19,0 chr1 1026575 . T . PASS END=1026613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:26,0 chr1 1026614 . G . PASS END=1026616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1026617 . G . PASS END=1026618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 1026619 . G . PASS END=1026619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1026620 . G . PASS END=1026640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,872:0,61,255:26,0 chr1 1026641 . C . PASS END=1026641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 1026642 . C . PASS END=1026642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 1026643 . T . PASS END=1026643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 1026644 . G . PASS END=1026650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:25,0 chr1 1026651 . C . PASS END=1026653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1026654 . T . PASS END=1026654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1026655 . C . PASS END=1026661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1026662 . C . PASS END=1026669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 1026670 . G . PASS END=1026706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:26,0 chr1 1026707 . C A, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,18,0:0,11,0:84:172,87,0,1108,87,1108:255,87,0:0,0:1.3428e+02,8.4278e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,16:0,0,16,13 chr1 1026708 . C . PASS END=1026744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,902:0,62,255:25,0 chr1 1026745 . C . PASS END=1026746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:25,0 chr1 1026747 . T . PASS END=1026747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 1026748 . C . PASS END=1026754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 1026852 . C . PASS END=1026969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:80:40:0,80,1443:0,80,255:40,0 chr1 1026970 . G . PASS END=1026970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:64:42:0,64,1362:0,64,255:37,0 chr1 1026971 . C . PASS END=1026974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:42:0,93,1406:0,93,255:40,0 chr1 1026975 . A . PASS END=1026975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1263:0,70,255:35,0 chr1 1026976 . G . PASS END=1026989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:84:39:0,84,1260:0,87,255:37,0 chr1 1027371 . C . PASS END=1027400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:23,0 chr1 1114596 . A . PASS END=1114604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 1114605 . A . PASS END=1114605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 1114606 . G . PASS END=1114606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 1114607 . C . PASS END=1114609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1114610 . C . PASS END=1114631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:13,0 chr1 1114632 . G . PASS END=1114635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1114636 . C . PASS END=1114640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1114641 . A . PASS END=1114641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1114642 . C . PASS END=1114642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 1114643 . T . PASS END=1114658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,545:0,48,255:16,0 chr1 1114659 . T . PASS END=1114659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 1114660 . T . PASS END=1114673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 1114674 . A . PASS END=1114674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:14,0 chr1 1114675 . G . PASS END=1114683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1114684 . T . PASS END=1114693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 1114694 . G . PASS END=1114705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 1114706 . A . PASS END=1114706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 1114707 . G . PASS END=1114707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 1114708 . T . PASS END=1114708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 1114709 . C . PASS END=1114709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1114710 . T . PASS END=1114713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 1115037 . G . PASS END=1115089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:36:0,86,1349:0,86,255:39,0 chr1 1115090 . T . PASS END=1115090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:29,0 chr1 1115091 . G . PASS END=1115094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,101,255:32,0 chr1 1115095 . T . PASS END=1115095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:30,0 chr1 1115096 . G . PASS END=1115104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1254:0,89,255:33,0 chr1 1115105 . C . PASS END=1115105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr1 1115106 . A . PASS END=1115114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 1115115 . T . PASS END=1115117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:26,0 chr1 1115414 . G . PASS END=1115427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 1115428 . A . PASS END=1115428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 1115429 . G . PASS END=1115434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr1 1115435 . T . PASS END=1115435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 1115436 . G . PASS END=1115447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 1115448 . G . PASS END=1115469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 1115470 . C . PASS END=1115470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 1115471 . C . PASS END=1115486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 1115487 . C . PASS END=1115487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:17,0 chr1 1115488 . G . PASS END=1115504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,49,255:19,0 chr1 1115505 . T . PASS END=1115506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 1115507 . G . PASS END=1115543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr1 1115544 . A . PASS END=1115551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 1115552 . C . PASS END=1115552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1115553 . C . PASS END=1115553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1115554 . C . PASS END=1115554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 1115555 . C . PASS END=1115559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1115560 . C . PASS END=1115560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 1115561 . T . PASS END=1115565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 1115566 . A . PASS END=1115566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1115567 . A . PASS END=1115587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 1115588 . C . PASS END=1115588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 1115589 . G . PASS END=1115592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1115593 . G . PASS END=1115603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:18,0 chr1 1115604 . C . PASS END=1115604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 1115605 . G . PASS END=1115606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 1115607 . C . PASS END=1115607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:16,0 chr1 1115608 . G . PASS END=1115618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:16,0 chr1 1115619 . T . PASS END=1115619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 1115620 . G . PASS END=1115630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,630:0,40,255:16,0 chr1 1115631 . G . PASS END=1115642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1115643 . G . PASS END=1115643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 1115644 . G . PASS END=1115647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,472:0,39,255:13,0 chr1 1115648 . G . PASS END=1115648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 1115649 . T . PASS END=1115652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1115653 . A . PASS END=1115653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 1115654 . A . PASS END=1115676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 1115677 . C . PASS END=1115677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 1115678 . C . PASS END=1115690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 1115691 . C . PASS END=1115704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 1115705 . G . LowGQ END=1115705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,257:4,0,255:8,0 chr1 1115706 . C . PASS END=1115706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 1115707 . A . PASS END=1115709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 1115710 . G . PASS END=1115710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 1115711 . G . PASS END=1115714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 1115715 . C . PASS END=1115720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 1115863 . C . PASS END=1115866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,832:0,61,255:25,0 chr1 1115867 . A . PASS END=1115867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:24,0 chr1 1115868 . G . PASS END=1115872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,817:0,61,255:25,0 chr1 1115873 . T . PASS END=1115873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,705:0,25,255:22,0 chr1 1115874 . A . PASS END=1115875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 1115876 . T . LowGQ END=1115876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,659:20,0,255:21,0 chr1 1115877 . G . PASS END=1115877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,715:0,42,255:23,0 chr1 1115878 . C . PASS END=1115881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,812:0,78,255:26,0 chr1 1115882 . A . PASS END=1115882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 1115883 . G . PASS END=1115883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,830:0,67,255:27,0 chr1 1115884 . C . PASS END=1115886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 1115887 . G . PASS END=1115887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:25,0 chr1 1115888 . G . PASS END=1115889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr1 1115890 . C . PASS END=1115892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1115893 . G . PASS END=1115893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 1115894 . C . PASS END=1115895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:26,0 chr1 1115896 . G . PASS END=1115904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1149:0,82,255:31,0 chr1 1115905 . T . PASS END=1115905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,986:0,35,255:29,0 chr1 1115906 . G . PASS END=1115906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1115907 . A . PASS END=1115907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 1115908 . C . PASS END=1115909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1115910 . G . PASS END=1115910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr1 1115911 . C . PASS END=1115913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr1 1115914 . C . PASS END=1115915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 1115916 . G . PASS END=1115916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:31,0 chr1 1115917 . G . PASS END=1115922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1158:0,80,255:32,0 chr1 1115923 . C . PASS END=1115924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1088:0,79,255:26,0 chr1 1115925 . A . PASS END=1115925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 1115926 . C . PASS END=1115927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr1 1115928 . C . PASS END=1115928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:25,0 chr1 1115929 . G . PASS END=1115929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,978:0,16,255:25,0 chr1 1115930 . C . PASS END=1115932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 1115933 . A . PASS END=1115936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:28:0,48,900:0,48,255:26,0 chr1 1115937 . G . PASS END=1115943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:26,0 chr1 1115944 . G . PASS END=1115944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,916:0,37,255:25,0 chr1 1115945 . G . PASS END=1115956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,864:0,61,255:26,0 chr1 1115957 . G . PASS END=1115957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:20,0 chr1 1115958 . A . PASS END=1115960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:18,0 chr1 1115961 . G . PASS END=1115961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,747:0,20,255:17,0 chr1 1115962 . C . PASS END=1115962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:20,0 chr1 1115963 . T . PASS END=1115963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr1 1115964 . A . PASS END=1115966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1115967 . G . PASS END=1115967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:20,0 chr1 1115968 . C . PASS END=1115968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1115969 . A . PASS END=1115970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,714:0,46,255:20,0 chr1 1115971 . C . PASS END=1115972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1115973 . T . PASS END=1115976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,684:0,46,255:20,0 chr1 1115977 . G . PASS END=1115977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:18,0 chr1 1115978 . G . PASS END=1115981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr1 1116111 . G . PASS END=1116123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:23,0 chr1 1116124 . G . PASS END=1116124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:24,0 chr1 1116125 . T . PASS END=1116125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:23,0 chr1 1116126 . A . PASS END=1116157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,840:0,61,255:26,0 chr1 1116158 . A . PASS END=1116158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,787:0,48,255:24,0 chr1 1116159 . A . PASS END=1116170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 1116171 . T . PASS END=1116171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:24,0 chr1 1116172 . C . PASS END=1116199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,955:0,69,255:26,0 chr1 1116200 . A . PASS END=1116200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 1116201 . T . PASS END=1116203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 1116204 . G . PASS END=1116204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 1116205 . C . PASS END=1116215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1116216 . A . PASS END=1116216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 1116217 . G . PASS END=1116218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 1116219 . T . PASS END=1116219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 1116220 . G . PASS END=1116220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1116221 . C . PASS END=1116221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 1116222 . C . PASS END=1116223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1116224 . G . PASS END=1116227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 1116228 . G . PASS END=1116228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:16,0 chr1 1116229 . G . PASS END=1116232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:16,0 chr1 1116233 . C . PASS END=1116240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:17:0,30,450:0,51,255:11,0 chr1 1117121 . G . PASS END=1117126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 1117127 . A . PASS END=1117127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 1117128 . A . PASS END=1117137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:23,0 chr1 1117138 . C . PASS END=1117138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 1117139 . A . PASS END=1117145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1117146 . G . PASS END=1117146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 1117147 . C . PASS END=1117173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,809:0,69,255:24,0 chr1 1117174 . C . PASS END=1117174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 1117175 . A . PASS END=1117175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1117176 . G . PASS END=1117176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 1117177 . G . PASS END=1117177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1117178 . A . PASS END=1117178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 1117179 . T . PASS END=1117179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,790:0,38,255:20,0 chr1 1117180 . A . PASS END=1117181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1117182 . C . PASS END=1117195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 1117741 . G . PASS END=1117826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:38:0,96,1510:0,96,255:40,0 chr1 1118256 . A . PASS END=1118290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr1 1118291 . A . PASS END=1118326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:13,0 chr1 1118327 . G . PASS END=1118330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1118331 . A . PASS END=1118331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 1118332 . A . PASS END=1118341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 1118342 . C . PASS END=1118342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1118343 . T . PASS END=1118350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 1118351 . A . PASS END=1118356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 1118357 . C . PASS END=1118357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 1118358 . G . PASS END=1118365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 1118366 . G . PASS END=1118366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 1118367 . A . PASS END=1118369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 1118370 . A . PASS END=1118370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1118371 . C . PASS END=1118375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 1118376 . C . PASS END=1118376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 1118377 . C . PASS END=1118386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 1118387 . A . PASS END=1118387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 1118388 . A . PASS END=1118392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 1118393 . C . PASS END=1118393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 1118394 . C . PASS END=1118401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 1118402 . G . PASS END=1118402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 1118403 . G . PASS END=1118405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 1118406 . C . PASS END=1118406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1118407 . T . PASS END=1118410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 1118411 . G . PASS END=1118411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1118412 . C . PASS END=1118417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 1118418 . T . PASS END=1118425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr1 1118426 . A . PASS END=1118426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 1118427 . G . PASS END=1118427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1119300 . G . PASS END=1119317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 1119318 . G . PASS END=1119318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 1119319 . C . PASS END=1119328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 1119329 . G . PASS END=1119329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 1119330 . G . PASS END=1119334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,995:0,87,255:29,0 chr1 1119335 . A . PASS END=1119335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 1119336 . G . PASS END=1119448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1011:0,87,255:40,0 chr1 1119449 . T . PASS END=1119449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr1 1119450 . C . PASS END=1119459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 1119460 . T . PASS END=1119460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 1119461 . T . PASS END=1119471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 1120349 . T . PASS END=1120356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,564:0,54,255:18,0 chr1 1120357 . G . PASS END=1120363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 1120364 . A . PASS END=1120364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 1120365 . G . PASS END=1120368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 1120369 . T . PASS END=1120369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 1120370 . C . PASS END=1120373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 1120374 . A . PASS END=1120374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 1120375 . C . PASS END=1120395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:23:0,62,831:0,62,255:26,0 chr1 1120396 . G . PASS END=1120454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1186:0,84,255:36,0 chr1 1120455 . G . PASS END=1120455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,970:0,36,255:29,0 chr1 1120456 . C . PASS END=1120508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:33,0 chr1 1120509 . C . PASS END=1120522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,925:0,67,255:26,0 chr1 1120640 . C . PASS END=1120649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 1120650 . C . PASS END=1120662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:19,0 chr1 1120663 . G . PASS END=1120665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 1120666 . C . PASS END=1120700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,623:0,54,255:19,0 chr1 1120701 . A . PASS END=1120704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 1120705 . C . PASS END=1120761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 1120762 . C . PASS END=1120765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 1120766 . T . PASS END=1120766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 1120767 . C . PASS END=1120791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:25,0 chr1 1120792 . A . PASS END=1120792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr1 1120813 . A . PASS END=1120814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1120815 . C . PASS END=1120831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,659:0,41,255:19,0 chr1 1120832 . G . PASS END=1120832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 1120833 . G . PASS END=1120884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:17,0 chr1 1120885 . G . PASS END=1120888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 1120889 . G . PASS END=1120889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:9,0 chr1 1120890 . C . PASS END=1120894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 1120895 . A . PASS END=1120902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 1120903 . T . PASS END=1120905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 1121082 . G . PASS END=1121082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,2 chr1 1121083 . C . LowGQ END=1121083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,590:12,0,255:17,2 chr1 1121084 . C . PASS END=1121084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:18,0 chr1 1121085 . C . PASS END=1121087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 1121088 . G . PASS END=1121088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 1121089 . A . PASS END=1121106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:18:0,47,668:0,47,255:19,0 chr1 1121107 . G . PASS END=1121146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:26,0 chr1 1121147 . C . PASS END=1121149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 1121150 . C . PASS END=1121153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1121154 . G . PASS END=1121163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 1121164 . G . PASS END=1121164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1121165 . C . PASS END=1121165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 1121166 . C . PASS END=1121166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 1121167 . T . PASS END=1121173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 1121174 . A . PASS END=1121174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 1121175 . C . PASS END=1121178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 1121179 . C . PASS END=1121179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 1121180 . C . PASS END=1121181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 1121182 . C . PASS END=1121182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 1121183 . A . PASS END=1121185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr1 1121186 . T . PASS END=1121186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:26,0 chr1 1121187 . C . PASS END=1121197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1121198 . T . PASS END=1121198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:25,0 chr1 1121199 . C . PASS END=1121228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr1 1124198 . G . PASS END=1124219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:86:0,120,1800:0,193,255:40,0 chr1 1124220 . A . PASS END=1124256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:72:0,120,1800:0,173,255:40,0 chr1 1124257 . A G, 49.97 PASS DP=72;MQ=249.24;MQRankSum=7.240;ReadPosRankSum=4.537;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,35,0:0.493,0.000:71:12,15,0:24,20,0:48:85,0,50,1223,1279,2502:255,0,255:33,0:4.9972e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,21,15,20:19,17,15,20 chr1 1124258 . C . PASS END=1124263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,199,255:40,0 chr1 1129987 . T . PASS END=1130055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,107,1388:0,107,255:40,0 chr1 1130056 . C . PASS END=1130088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1215:0,89,255:40,0 chr1 1131766 . T . PASS END=1131828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,796:0,62,255:26,0 chr1 1131980 . A . PASS END=1132096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:42:0,94,1530:0,94,255:40,1 chr1 1132473 . G . PASS END=1132478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1132479 . C . PASS END=1132495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,869:0,81,255:29,0 chr1 1132496 . T . PASS END=1132496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:28,0 chr1 1132497 . A . PASS END=1132535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1072:0,83,255:34,0 chr1 1132536 . G . PASS END=1132540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 1132541 . C . PASS END=1132546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 1132547 . T . PASS END=1132548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,972:0,70,255:26,0 chr1 1132549 . T . PASS END=1132550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,945:0,45,255:25,0 chr1 1132551 . G . PASS END=1132566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 1132818 . A . PASS END=1132820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,415:0,28,255:14,0 chr1 1132821 . T . PASS END=1132821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,380:0,12,255:13,0 chr1 1132822 . G . PASS END=1132822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 1132823 . G . PASS END=1132823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1132824 . T . PASS END=1132824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 1132825 . G . PASS END=1132825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,515:0,20,255:16,0 chr1 1132826 . C . PASS END=1132826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 1132827 . T . PASS END=1132827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 1132828 . C . PASS END=1132828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:16,0 chr1 1132829 . G . PASS END=1132832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr1 1132833 . C . PASS END=1132833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 1132834 . C . PASS END=1132836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:17:0,43,668:0,43,255:18,0 chr1 1132837 . C . PASS END=1132837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 1132838 . C . PASS END=1132838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1132839 . G . PASS END=1132839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,576:0,27,255:17,0 chr1 1132840 . G . PASS END=1132847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:19,0 chr1 1132848 . T . PASS END=1132848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:18,0 chr1 1132849 . G . PASS END=1132854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:18,0 chr1 1132855 . C . PASS END=1132855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 1132856 . C . PASS END=1132860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,562:0,40,255:17,0 chr1 1132861 . G . PASS END=1132861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:16,0 chr1 1132862 . A . PASS END=1132863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,546:0,40,255:17,0 chr1 1132864 . G . PASS END=1132864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 1132865 . T . PASS END=1132867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,682:0,44,255:18,0 chr1 1132868 . C . PASS END=1132868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 1132869 . C . PASS END=1132869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 1132870 . T . PASS END=1132870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 1132871 . C . PASS END=1132881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 1132882 . G . PASS END=1132882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:16,0 chr1 1132883 . C . PASS END=1132886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:16,0 chr1 1132887 . G . PASS END=1132887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 1132888 . C . PASS END=1132888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1132889 . T . PASS END=1132889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,476:0,34,255:16,0 chr1 1132890 . T . PASS END=1132900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 1132901 . C . PASS END=1132927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 1132928 . C . PASS END=1132937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,808:0,63,255:23,0 chr1 1132938 . G A, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=2.326;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:5,5,0:5,8,0:48:85,0,49,436,358,794:255,0,255:10,0:5.0000e+01,6.9375e-05,5.2247e+01,4.3623e+02,3.9237e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,5,8:5,5,9,4 chr1 1132939 . C . PASS END=1132965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,923:0,62,255:25,0 chr1 1132966 . C A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=2.655;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:5,4,0:6,10,0:48:85,0,49,501,393,894:255,0,255:10,0:5.0000e+01,6.9634e-05,5.2214e+01,4.5000e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,7,7:8,3,7,7 chr1 1132967 . C . PASS END=1132979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 1132980 . A . PASS END=1132980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 1132981 . G . PASS END=1132989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:25,0 chr1 1132990 . C . PASS END=1132990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1132991 . T . PASS END=1132993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr1 1132994 . G . PASS END=1132997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1132998 . C . PASS END=1132999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1133000 . C . PASS END=1133003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1133004 . T . PASS END=1133007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 1133008 . G . PASS END=1133009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1133010 . A . PASS END=1133017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1014:0,68,255:26,0 chr1 1133018 . G . PASS END=1133020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1133021 . C . PASS END=1133021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 1133022 . A . PASS END=1133025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1133026 . G . PASS END=1133028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,978:0,67,255:26,0 chr1 1133029 . C . PASS END=1133029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:24,0 chr1 1133030 . G . PASS END=1133038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:25,0 chr1 1133039 . C . PASS END=1133039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:23,0 chr1 1133040 . C . PASS END=1133061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,917:0,68,255:25,0 chr1 1133062 . G . PASS END=1133062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 1133063 . C . PASS END=1133076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 1133077 . A G, 47.78 PASS DP=27;MQ=248.66;MQRankSum=3.578;ReadPosRankSum=1.406;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,11,0:0.407,0.000:27:9,6,0:7,5,0:47:83,0,50,364,564,928:255,0,255:15,0:4.7784e+01,9.3967e-05,5.3000e+01,3.6419e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,9,2:9,7,6,5 chr1 1133078 . C . PASS END=1133082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1015:0,71,255:27,0 chr1 1133083 . C . PASS END=1133085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 1133086 . C . PASS END=1133086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 1133087 . G . PASS END=1133088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 1133089 . C . PASS END=1133089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 1133090 . C . PASS END=1133095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 1133096 . A . PASS END=1133096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 1133097 . G . PASS END=1133100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1133101 . C . PASS END=1133102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:25,0 chr1 1133103 . A . PASS END=1133103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:24,0 chr1 1133104 . C . PASS END=1133104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1133105 . G . PASS END=1133105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 1133106 . A . PASS END=1133107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 1133108 . G . PASS END=1133108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 1133109 . G . PASS END=1133110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1133111 . G . PASS END=1133114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1133115 . C . PASS END=1133128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 1133129 . A . PASS END=1133129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:22,0 chr1 1133130 . C . PASS END=1133136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,914:0,72,255:24,0 chr1 1133137 . G . PASS END=1133151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 1133152 . C . PASS END=1133152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 1133153 . A . PASS END=1133155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1133156 . C . PASS END=1133161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1133162 . G . PASS END=1133168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 1133169 . A . PASS END=1133169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,886:0,40,255:27,0 chr1 1133170 . G . PASS END=1133175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1057:0,87,255:29,0 chr1 1133176 . C . PASS END=1133180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 1133181 . G . PASS END=1133181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:24,0 chr1 1133182 . G . PASS END=1133182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1133183 . A . PASS END=1133184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1133185 . A . PASS END=1133187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 1133188 . C . PASS END=1133188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1133189 . A . PASS END=1133189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 1133190 . A . PASS END=1133192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1133193 . A . PASS END=1133193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 1133194 . G . PASS END=1133204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 1133205 . A . PASS END=1133216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,925:0,65,255:26,0 chr1 1133217 . C . PASS END=1133227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr1 1138971 . C . PASS END=1138989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,613:0,54,255:19,0 chr1 1138990 . G . PASS END=1138996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 1138997 . C . PASS END=1139009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 1139010 . G . PASS END=1139071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 1139072 . G . PASS END=1139084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr1 1139085 . G . PASS END=1139113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr1 1139114 . G . PASS END=1139129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1074:0,84,255:30,0 chr1 1139130 . G . PASS END=1139130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 1139131 . G . PASS END=1139171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:29,0 chr1 1139172 . A . PASS END=1139173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1139174 . C . PASS END=1139174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1139175 . T . PASS END=1139204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,906:0,64,255:26,0 chr1 1139205 . C . PASS END=1139206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1139207 . C . PASS END=1139219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 1139220 . A . PASS END=1139220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:23,0 chr1 1139221 . G . PASS END=1139223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,990:0,68,255:23,0 chr1 1139224 . T . PASS END=1139224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,854:0,39,255:22,0 chr1 1139225 . C . PASS END=1139225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 1139226 . A . PASS END=1139226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 1139227 . C . PASS END=1139233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,856:0,61,255:26,0 chr1 1139234 . A . PASS END=1139236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 1139237 . T . PASS END=1139341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,853:0,61,255:26,0 chr1 1139342 . T . PASS END=1139342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 1139343 . G . PASS END=1139348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 1139349 . C . PASS END=1139350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1139351 . G . PASS END=1139362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 1139363 . C . PASS END=1139363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 1139364 . G . PASS END=1139384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,64,255:26,0 chr1 1139385 . C . PASS END=1139417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 1139418 . G . PASS END=1139419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1139420 . G . PASS END=1139475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,621:0,40,255:19,0 chr1 1139476 . A . PASS END=1139476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 1139477 . G . PASS END=1139484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 1139485 . A . PASS END=1139489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1139490 . G . PASS END=1139536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,607:0,45,255:18,0 chr1 1139537 . C . PASS END=1139537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 1139538 . C . PASS END=1139550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,630:0,41,255:17,0 chr1 1139551 . G . PASS END=1139552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 1139553 . G . PASS END=1139557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:15,0 chr1 1139558 . A . PASS END=1139558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 1139559 . C . PASS END=1139560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 1139561 . C . PASS END=1139567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,540:0,34,255:13,0 chr1 1139568 . G . PASS END=1139568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1139569 . T . PASS END=1139569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 1139570 . G . PASS END=1139587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 1139588 . A . PASS END=1139588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 1139589 . C . PASS END=1139593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 1139594 . T . PASS END=1139594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 1139595 . G . PASS END=1139609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:18,0 chr1 1139610 . G . PASS END=1139610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 1139611 . G . PASS END=1139616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 1139779 . T . PASS END=1139785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,909:0,64,255:26,0 chr1 1139786 . A . PASS END=1139786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 1139787 . A . PASS END=1139787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:26,0 chr1 1139788 . G . PASS END=1139788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 1139789 . G . PASS END=1139789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 1139790 . T . PASS END=1139792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,958:0,84,255:28,0 chr1 1139793 . G . PASS END=1139794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 1139795 . A . PASS END=1139797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,923:0,45,255:26,0 chr1 1139798 . G . PASS END=1139800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1139801 . C . PASS END=1139801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:25,0 chr1 1139802 . T . PASS END=1139802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 1139803 . T . PASS END=1139803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 1139804 . C . PASS END=1139804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,881:0,20,255:25,0 chr1 1139805 . G . PASS END=1139805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 1139806 . T . PASS END=1139807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,948:0,84,255:28,0 chr1 1139808 . G . PASS END=1139808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,873:0,12,255:25,0 chr1 1139809 . C . PASS END=1139812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1056:0,87,255:31,0 chr1 1139813 . C . PASS END=1139813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:7:31:0,7,969:0,7,255:28,0 chr1 1139814 . G . PASS END=1139816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:32,0 chr1 1139817 . G . PASS END=1139817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 1139818 . A . PASS END=1139818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1089:0,96,255:32,0 chr1 1139819 . A . PASS END=1139819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,972:0,40,255:30,0 chr1 1139820 . G . PASS END=1139821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1141:0,82,255:32,0 chr1 1139822 . T . PASS END=1139822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:29:33:0,29,1043:0,29,255:31,0 chr1 1139823 . C . PASS END=1139825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1168:0,99,255:33,0 chr1 1139826 . C . PASS END=1139826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:22:33:0,22,1116:0,22,255:30,0 chr1 1139827 . G . PASS END=1139827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 1139828 . A . PASS END=1139828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1091:0,35,255:29,0 chr1 1139829 . G . PASS END=1139829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 1139830 . G . PASS END=1139830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1070:0,30,255:30,0 chr1 1139831 . C . PASS END=1139831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1099:0,71,255:29,0 chr1 1139832 . A . PASS END=1139832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 1139833 . C . PASS END=1139834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:52:34:0,52,1017:0,52,255:27,0 chr1 1139835 . G . PASS END=1139835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1213:0,88,255:29,0 chr1 1139836 . T . PASS END=1139839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1057:0,55,255:28,0 chr1 1139840 . T . PASS END=1139840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:28,0 chr1 1139841 . A . PASS END=1139843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1091:0,88,255:29,0 chr1 1139844 . C . LowGQ END=1139844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,892:9,0,255:27,0 chr1 1139845 . T . PASS END=1139845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,972:0,49,255:28,0 chr1 1139846 . G . PASS END=1139846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1184:0,83,255:27,0 chr1 1139847 . G . PASS END=1139847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,972:0,49,255:25,0 chr1 1139848 . A . PASS END=1139848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 1139849 . A . LowGQ END=1139849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,856:7,0,255:24,0 chr1 1139850 . G . PASS END=1139850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,911:0,46,255:25,0 chr1 1139851 . C . PASS END=1139851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 1139852 . C . PASS END=1139852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:16:33:0,16,951:0,16,255:22,0 chr1 1139853 . A . PASS END=1139855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1091:0,66,255:26,0 chr1 1139856 . A . PASS END=1139856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,851:0,49,255:23,0 chr1 1139857 . C . PASS END=1139858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,842:0,27,255:24,0 chr1 1139859 . G . PASS END=1139859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,809:0,40,255:24,0 chr1 1139860 . A . PASS END=1139860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr1 1139861 . A . LowGQ END=1139861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,820:26,0,255:23,0 chr1 1139862 . T . PASS END=1139862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 1139863 . T . PASS END=1139863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 1139864 . T . LowGQ END=1139864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,10:31:0:31:0,0,550:73,0,255:19,0 chr1 1139865 . C . PASS END=1139866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 1140750 . C . PASS END=1140845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,980:0,81,255:33,0 chr1 1140846 . A . PASS END=1140861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,67,255:26,0 chr1 1140862 . G . PASS END=1140872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 1141765 . C . PASS END=1141765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 1141766 . C . PASS END=1141766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 1141767 . G . PASS END=1141769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,803:0,69,255:24,0 chr1 1141770 . T . PASS END=1141770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 1141771 . A . PASS END=1141771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 1141772 . A . PASS END=1141772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 1141773 . T . PASS END=1141774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1141775 . G . PASS END=1141775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 1141776 . C . PASS END=1141779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 1141780 . A . PASS END=1141780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,945:0,50,255:24,0 chr1 1141781 . G . PASS END=1141782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:25,0 chr1 1141783 . A . PASS END=1141783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,880:0,42,255:25,0 chr1 1141784 . G . PASS END=1141790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 1141791 . G . PASS END=1141793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1141794 . T . PASS END=1141795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 1141796 . A . PASS END=1141828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1105:0,84,255:33,0 chr1 1141829 . A . PASS END=1141829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:31,0 chr1 1141830 . A . PASS END=1141933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1150:0,81,255:40,0 chr1 1141934 . C . PASS END=1141934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:29,0 chr1 1141935 . G . PASS END=1141939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:30,0 chr1 1141940 . G . PASS END=1141940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 1141941 . T . PASS END=1141951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,83,255:28,0 chr1 1146935 . T . PASS END=1146948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:13,0 chr1 1146949 . G . PASS END=1146951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 1146952 . T . PASS END=1146952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1146953 . G . PASS END=1146970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 1146971 . C . PASS END=1146971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1146972 . T . PASS END=1146980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 1146981 . A . PASS END=1146981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 1146982 . T . PASS END=1146985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1146986 . G . PASS END=1147005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 1147006 . C . PASS END=1147006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 1147007 . T . PASS END=1147007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 1147008 . G . PASS END=1147014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 1147015 . A . PASS END=1147015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 1147016 . A . PASS END=1147022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 1147023 . A . PASS END=1147023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:10,0 chr1 1147024 . G . PASS END=1147024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1147025 . A . PASS END=1147025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:11,0 chr1 1147026 . G . PASS END=1147026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1147027 . A . PASS END=1147027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:11,0 chr1 1147028 . T . PASS END=1147031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1147032 . T . PASS END=1147032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 1147033 . G . PASS END=1147039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:12,0 chr1 1147040 . C . PASS END=1147040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:12,0 chr1 1147041 . C . PASS END=1147058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1147059 . T . PASS END=1147059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr1 1147060 . G . PASS END=1147060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 1147061 . C . PASS END=1147061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 1147062 . G . PASS END=1147063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 1147064 . C . PASS END=1147065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 1147066 . G . PASS END=1147066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 1147067 . G . PASS END=1147067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 1147068 . G . PASS END=1147068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 1147069 . C . PASS END=1147072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1147073 . G . PASS END=1147073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 1147074 . A . PASS END=1147075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1147076 . G . PASS END=1147076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 1147077 . C . PASS END=1147079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1147080 . T . PASS END=1147080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 1147081 . C . PASS END=1147086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 1147087 . G . PASS END=1147087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 1147088 . G . PASS END=1147091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 1147092 . T . PASS END=1147092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 1147093 . T . PASS END=1147099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 1147100 . A . PASS END=1147100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1147101 . T . PASS END=1147101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1147102 . C . PASS END=1147102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 1147103 . G . PASS END=1147110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 1147111 . G . PASS END=1147111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr1 1147112 . C . PASS END=1147150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,553:0,48,255:16,0 chr1 1147151 . G . PASS END=1147151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 1147152 . G . PASS END=1147152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 1147153 . C . PASS END=1147153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1147154 . C . PASS END=1147185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,562:0,48,255:17,0 chr1 1147186 . G . PASS END=1147186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 1147187 . G . PASS END=1147187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1147188 . C . PASS END=1147188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 1147189 . C . PASS END=1147189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1147190 . C . PASS END=1147207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr1 1147208 . A . PASS END=1147208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 1147209 . C . PASS END=1147212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 1147314 . G . PASS END=1147314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1147322 . C . PASS END=1147375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 1147376 . C . PASS END=1147378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 1147379 . C . PASS END=1147384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1147385 . G . PASS END=1147387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1147388 . G . PASS END=1147389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1147390 . A . PASS END=1147392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1147393 . G . PASS END=1147421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 1147422 . C T, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=2.163;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,8,0:0.615,0.000:13:4,4,0:1,4,0:48:85,0,49,257,179,436:241,0,155:5,0:5.0000e+01,7.3258e-05,5.1648e+01,2.5738e+02,2.1360e+02,4.3899e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,5,3:1,4,5,3 chr1 1147423 . T . PASS END=1147444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 1147445 . G . PASS END=1147445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 1147446 . G . PASS END=1147459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 1147460 . A . PASS END=1147475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 1147476 . A . PASS END=1147476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 1147477 . T . PASS END=1147493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 1147494 . G . PASS END=1147494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 1147495 . G . PASS END=1147518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 1148018 . T . PASS END=1148019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 1148020 . G . PASS END=1148024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 1148025 . A . PASS END=1148025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 1148026 . G . PASS END=1148035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 1148036 . G . PASS END=1148039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1148040 . G . PASS END=1148050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 1148051 . G . PASS END=1148051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 1148052 . G . PASS END=1148066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,505:0,45,255:16,0 chr1 1148067 . G . PASS END=1148067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1148068 . A . PASS END=1148084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 1148242 . C . PASS END=1148252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:23,0 chr1 1148253 . G . PASS END=1148256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 1148257 . T . PASS END=1148264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1148265 . C . PASS END=1148281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 1148282 . G . PASS END=1148283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1148284 . G . PASS END=1148285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1148286 . C . PASS END=1148311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,992:0,65,255:26,0 chr1 1148372 . C . PASS END=1148374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr1 1148375 . C . PASS END=1148375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1148376 . T . PASS END=1148376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 1148377 . C . PASS END=1148377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1148378 . C . PASS END=1148400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr1 1148401 . T . PASS END=1148403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,585:0,35,255:13,0 chr1 1148404 . G . PASS END=1148405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 1148406 . G . PASS END=1148406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 1148407 . C . PASS END=1148409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1148410 . G . PASS END=1148410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 1148411 . C . PASS END=1148412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1148413 . C . PASS END=1148414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:15,0 chr1 1148415 . G . PASS END=1148415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1148416 . C . LowGQ END=1148419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:0:16:0,0,451:0,0,255:14,0 chr1 1148420 . G . PASS END=1148420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 1148421 . G . LowGQ END=1148421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:4,0,255:14,0 chr1 1148422 . C . PASS END=1148423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 1148424 . G . PASS END=1148424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,545:0,20,255:14,0 chr1 1148425 . A . PASS END=1148426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:14,0 chr1 1148427 . T . PASS END=1148428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1148429 . T . PASS END=1148431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,476:0,9,255:14,0 chr1 1148432 . C . PASS END=1148432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:15,0 chr1 1148433 . C . LowGQ END=1148435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:0:16:0,0,449:0,0,255:15,0 chr1 1148436 . T . PASS END=1148436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1148437 . G . PASS END=1148439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr1 1148440 . G . PASS END=1148440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1148441 . C . PASS END=1148441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,543:0,20,255:15,0 chr1 1148442 . C . PASS END=1148445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1148446 . C . PASS END=1148447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 1148448 . C . PASS END=1148448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 1148449 . A . LowGQ END=1148449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,519:1,0,255:15,0 chr1 1148450 . G . PASS END=1148450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:16,0 chr1 1148451 . C . PASS END=1148451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 1148452 . T . PASS END=1148453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:16,0 chr1 1148454 . C . PASS END=1148454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1148455 . T . PASS END=1148456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr1 1148457 . C . PASS END=1148457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1148458 . C . LowGQ END=1148458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,474:4,0,255:15,0 chr1 1148459 . G . PASS END=1148459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1148460 . C . LowGQ END=1148460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:15,0 chr1 1148461 . T . PASS END=1148461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr1 1148462 . C . PASS END=1148462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1148463 . A . PASS END=1148463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:12,0 chr1 1148464 . C . LowGQ END=1148464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,466:26,0,255:11,0 chr1 1148465 . T . PASS END=1148466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,492:0,12,255:12,0 chr1 1148467 . C . PASS END=1148467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,488:0,4,255:11,0 chr1 1148468 . C . PASS END=1148469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:12,0 chr1 1148470 . C . LowGQ END=1148470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,518:4,0,255:11,0 chr1 1148471 . T . PASS END=1148471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:13,0 chr1 1148472 . T . PASS END=1148472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 1148473 . C . PASS END=1148473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:13,0 chr1 1148474 . C . PASS END=1148478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 1148479 . C . PASS END=1148479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 1148480 . A . PASS END=1148485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr1 1148486 . C . PASS END=1148486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 1148487 . G . PASS END=1148488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1148489 . A . PASS END=1148489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr1 1148490 . T . PASS END=1148501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 1148502 . C . PASS END=1148514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 1148515 . T . PASS END=1148534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr1 1148535 . C . PASS END=1148535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 1148536 . G . PASS END=1148536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1148537 . T . PASS END=1148537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 1148538 . G . PASS END=1148542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1148543 . C . PASS END=1148543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 1148544 . T . PASS END=1148562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 1148563 . C . PASS END=1148563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 1148564 . C . PASS END=1148564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1148565 . C . PASS END=1148565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 1148566 . A . PASS END=1148582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 1148583 . G . PASS END=1148583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 1148584 . G . PASS END=1148586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1148587 . A . PASS END=1148594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1148595 . G . PASS END=1148595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 1148596 . C . PASS END=1148615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 1148616 . A . PASS END=1148616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 1148617 . G . PASS END=1148618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1148619 . C . PASS END=1148619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 1148620 . C . PASS END=1148620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1148621 . C . PASS END=1148621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 1148622 . T . PASS END=1148644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,612:0,41,255:19,0 chr1 1148645 . C . PASS END=1148645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 1148646 . C . PASS END=1148648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 1148649 . C . PASS END=1148649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 1148650 . C . PASS END=1148651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 1148652 . T . PASS END=1148652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 1148653 . C . PASS END=1148659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 1148660 . A . PASS END=1148660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1148661 . C . PASS END=1148662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 1148663 . A . PASS END=1148681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 1148682 . G . PASS END=1148702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,720:0,44,255:19,0 chr1 1148703 . T . PASS END=1148706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 1148707 . C . PASS END=1148711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,44,255:14,0 chr1 1148712 . A . PASS END=1148742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 1148743 . A . PASS END=1148753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 1149043 . T . PASS END=1149056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 1149057 . G . PASS END=1149058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 1149059 . G . PASS END=1149059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 1149060 . C . PASS END=1149148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:19,0 chr1 1149149 . G . PASS END=1149156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 1149157 . T . PASS END=1149159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1149160 . C . PASS END=1149165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 1149167 . T . PASS END=1149167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1149363 . C . PASS END=1149363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 1149364 . T . PASS END=1149364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 1149365 . G . PASS END=1149376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,734:0,66,255:26,0 chr1 1149377 . T . PASS END=1149383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1149384 . A . PASS END=1149416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr1 1149417 . A . PASS END=1149417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 1149418 . G . PASS END=1149418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 1149419 . T . PASS END=1149419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:23,0 chr1 1149420 . G . PASS END=1149447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:26,0 chr1 1149448 . G . PASS END=1149454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1149455 . A . PASS END=1149456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 1149457 . G . PASS END=1149461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1149462 . G . PASS END=1149463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1149464 . G . PASS END=1149465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1149466 . C . PASS END=1149466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 1149467 . G . PASS END=1149470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1149471 . A . PASS END=1149507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:26,0 chr1 1152892 . T . PASS END=1152904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 1152905 . T . PASS END=1152928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,250:0,21,250:9,0 chr1 1152929 . A . PASS END=1152967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 1152968 . T . PASS END=1152979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1152980 . A . PASS END=1152980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 1152981 . G . PASS END=1152988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 1152989 . T . PASS END=1152989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 1152990 . T . PASS END=1152990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1152991 . C . PASS END=1153032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 1153033 . C . PASS END=1153034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1153035 . G . PASS END=1153060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 1153061 . A . PASS END=1153076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 1153077 . G . PASS END=1153113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 1153114 . A . PASS END=1153116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1153117 . T . PASS END=1153121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1153122 . G . PASS END=1153122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 1153123 . G . PASS END=1153134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 1153135 . A . PASS END=1153135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 1153136 . A . PASS END=1153147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 1153148 . A . PASS END=1153152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1153153 . C . PASS END=1153170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 1153171 . A . PASS END=1153184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 1153838 . C . PASS END=1154231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:85:36:0,85,1380:0,85,255:40,0 chr1 1154232 . T . PASS END=1154232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:33,0 chr1 1154233 . C . PASS END=1154385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1122:0,80,255:36,0 chr1 1156079 . T . PASS END=1156093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,111,1598:0,116,255:40,0 chr1 1156094 . T . PASS END=1156110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,120,1800:0,122,255:40,0 chr1 1158624 . T . PASS END=1158625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1158626 . T . PASS END=1158626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 1158627 . C . PASS END=1158630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr1 1158631 . A G, 50.00 PASS DP=31;MQ=249.22;MQRankSum=3.571;ReadPosRankSum=2.472;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,21,0:0.677,0.000:31:5,13,0:5,8,0:43:85,0,42,722,358,1080:255,0,255:10,0:5.0000e+01,1.9518e-04,4.4570e+01,4.5000e+02,3.9238e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,12,9:5,5,14,7 chr1 1158632 . T . PASS END=1158668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1156:0,93,255:33,0 chr1 1158669 . C . PASS END=1158671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:31,0 chr1 1158672 . C . PASS END=1158672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1096:0,55,255:27,0 chr1 1158673 . C . PASS END=1158695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1131:0,80,255:31,0 chr1 1158696 . T . PASS END=1158696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1092:0,41,255:29,0 chr1 1158697 . C . PASS END=1158702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 1158703 . A . PASS END=1158703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 1158704 . A . PASS END=1158706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1158707 . T . PASS END=1158707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 1158708 . T . PASS END=1158708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1158709 . C . PASS END=1158737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,848:0,61,255:26,0 chr1 1159212 . C . PASS END=1159212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 1159213 . G . PASS END=1159213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:11:35:0,11,991:0,11,255:32,0 chr1 1159214 . T . PASS END=1159215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1138:0,88,255:34,0 chr1 1159216 . C . PASS END=1159216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr1 1159217 . C . PASS END=1159218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 1159219 . G . PASS END=1159219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:27:35:0,27,1029:0,27,255:32,0 chr1 1159220 . T . PASS END=1159220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1124:0,41,255:32,0 chr1 1159221 . C . PASS END=1159221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1023:0,39,255:31,0 chr1 1159222 . A . PASS END=1159222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1213:0,88,255:34,0 chr1 1159223 . G . PASS END=1159223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1061:0,39,255:31,0 chr1 1159224 . G . PASS END=1159224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:34,0 chr1 1159225 . G . PASS END=1159228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1175:0,88,255:34,0 chr1 1159229 . A . PASS END=1159229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1064:0,69,255:32,0 chr1 1159230 . C . PASS END=1159230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1168:0,102,255:34,0 chr1 1159231 . G . PASS END=1159231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1055:0,30,255:31,0 chr1 1159232 . G . PASS END=1159239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:35:0,80,1176:0,80,255:39,0 chr1 1159240 . G . PASS END=1159240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1310:0,70,255:37,0 chr1 1159241 . T . PASS END=1159246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:40:0,96,1398:0,96,255:40,0 chr1 1159247 . T . PASS END=1159247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1398:0,65,255:39,0 chr1 1159248 . T . PASS END=1159255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:43:0,82,1421:0,82,255:40,0 chr1 1159256 . T . PASS END=1159257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1499:0,69,255:40,0 chr1 1159258 . C . PASS END=1159259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 1159260 . T . PASS END=1159260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:44:47:0,44,1396:0,44,255:40,0 chr1 1159261 . G . PASS END=1159261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:7:47:0,7,1323:0,7,255:40,0 chr1 1159262 . G . PASS END=1159267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:47:0,97,1613:0,97,255:40,0 chr1 1159268 . T . PASS END=1159268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1615:0,75,255:40,0 chr1 1159269 . G . PASS END=1159272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,114,1684:0,114,255:40,0 chr1 1159273 . G . PASS END=1159273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:67:50:0,67,1579:0,67,255:40,0 chr1 1159274 . T . PASS END=1159287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,112,1656:0,112,255:40,0 chr1 1159288 . C . PASS END=1159288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:25:50:0,25,1598:0,25,255:40,0 chr1 1159289 . T . PASS END=1159289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr1 1159290 . C . PASS END=1159290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:51:51:0,51,1689:0,51,255:40,0 chr1 1159291 . C . PASS END=1159293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,106,1703:0,106,255:40,0 chr1 1159294 . G . PASS END=1159294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:71:51:0,71,1685:0,71,255:40,0 chr1 1159295 . A . PASS END=1159296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:51:0,120,1723:0,120,255:40,0 chr1 1159297 . C . PASS END=1159297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:65:51:0,65,1643:0,65,255:40,0 chr1 1159298 . C . PASS END=1159312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:85:44:0,85,1447:0,85,255:40,0 chr1 1159313 . T . PASS END=1159313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1300:0,60,255:40,0 chr1 1159314 . T . PASS END=1159319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,99,1446:0,99,255:40,0 chr1 1159320 . T . PASS END=1159320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1373:0,71,255:38,0 chr1 1159321 . G . PASS END=1159332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:40:0,87,1355:0,87,255:39,0 chr1 1159333 . A . PASS END=1159333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:31,0 chr1 1159334 . G . PASS END=1159342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1260:0,117,255:32,0 chr1 1159343 . T . PASS END=1159348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:31:0,66,990:0,79,255:26,0 chr1 1163848 . T . PASS END=1163850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 1163851 . G . PASS END=1163851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 1163852 . A . PASS END=1163859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 1163860 . A . PASS END=1163860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1163861 . C . PASS END=1163870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 1163871 . C . PASS END=1163871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 1163872 . C . PASS END=1163876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:30,0 chr1 1163877 . G . PASS END=1163877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 1163878 . C . PASS END=1163886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:32,0 chr1 1163887 . G . PASS END=1163887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 1163888 . G . PASS END=1164032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1138:0,86,255:36,0 chr1 1164033 . T . PASS END=1164033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1127:0,71,255:30,0 chr1 1164034 . C . PASS END=1164062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1156:0,83,255:32,0 chr1 1164063 . C . PASS END=1164063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:26,0 chr1 1164064 . C . PASS END=1164090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:33,0 chr1 1164091 . G . PASS END=1164091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:29,2 chr1 1164092 . C . PASS END=1164092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1132:0,30,255:30,2 chr1 1164093 . C . PASS END=1164093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 1164094 . C . PASS END=1164111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 1164112 . C . PASS END=1164112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 1164113 . A . PASS END=1164122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 1164123 . G . PASS END=1164123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 1164124 . C . PASS END=1164130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 1164131 . G . PASS END=1164131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 1164132 . G . PASS END=1164132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 1164133 . G . PASS END=1164133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 1164134 . G . PASS END=1164140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 1164141 . C . PASS END=1164143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 1164144 . G . PASS END=1164147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 1164148 . G . PASS END=1164150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 1164151 . A . PASS END=1164151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr1 1164152 . T . PASS END=1164160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:25,0 chr1 1164161 . A . PASS END=1164161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:24,0 chr1 1164162 . G . PASS END=1164163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:25,0 chr1 1164164 . G . PASS END=1164164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:24,0 chr1 1164165 . C . PASS END=1164173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:25,0 chr1 1167659 . A . LowDepth;LowGQ END=1167694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1167695 . G . LowGQ END=1167938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 1167939 . T . PASS END=1167945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1167946 . G . LowGQ END=1167946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1167947 . G . PASS END=1167952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 1167953 . G . LowGQ END=1167953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1167954 . C . PASS END=1167959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1167960 . T . LowGQ END=1168023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,61:0,0,69:3,0 chr1 1168024 . G . PASS END=1168026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 1168027 . C . LowGQ END=1168027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1168028 . G . PASS END=1168042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 1168043 . T . PASS END=1168053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 1168054 . C . PASS END=1168061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 1168062 . A . PASS END=1168062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:5,0 chr1 1168063 . G . PASS END=1168064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 1168065 . T . PASS END=1168093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 1168094 . C . PASS END=1168101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 1168102 . C . PASS END=1168102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 1168103 . T . PASS END=1168130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 1168131 . A . PASS END=1168170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 1168171 . C . PASS END=1168182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 1168183 . C . PASS END=1168185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 1168186 . G . PASS END=1168186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 1168187 . C . PASS END=1168193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 1168194 . G . PASS END=1168194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 1168195 . C . PASS END=1168200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 1168201 . C . PASS END=1168216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,352:0,33,255:11,0 chr1 1168217 . T . PASS END=1168219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1168220 . G . PASS END=1168222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 1168223 . C . PASS END=1168264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 1168265 . T . PASS END=1168288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:13,0 chr1 1168289 . C . PASS END=1168297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 1168298 . C . PASS END=1168299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1168300 . G . PASS END=1168310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr1 1168311 . A . PASS END=1168313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1168314 . T . PASS END=1168314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 1168315 . G . PASS END=1168319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1168320 . C . PASS END=1168324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1168325 . G . PASS END=1168328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1168329 . T . PASS END=1168329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 1168330 . G . PASS END=1168338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:14:0,31,519:0,31,255:14,0 chr1 1168339 . C . PASS END=1168339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 1168340 . C . PASS END=1168345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 1168346 . C . PASS END=1168346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1168347 . T . PASS END=1168361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,540:0,31,255:13,0 chr1 1168362 . T . PASS END=1168362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr1 1168363 . G . PASS END=1168371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 1168372 . G . PASS END=1168377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 1168378 . C . PASS END=1168378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1168379 . G . PASS END=1168382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1168383 . A . PASS END=1168383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:13,0 chr1 1168384 . C . PASS END=1168385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1168386 . T . PASS END=1168386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 1168387 . G . PASS END=1168387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1168388 . T . PASS END=1168389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 1168390 . T . PASS END=1168390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 1168391 . C . PASS END=1168392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1168393 . G . PASS END=1168399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 1168400 . T . PASS END=1168401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 1168402 . G . PASS END=1168402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1168403 . C . PASS END=1168403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:12,0 chr1 1168404 . T . PASS END=1168427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 1168428 . A . PASS END=1168429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 1168430 . C . PASS END=1168431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,502:0,28,255:13,0 chr1 1168432 . C . PASS END=1168439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1168440 . G . PASS END=1168440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 1168441 . C . PASS END=1168447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1168448 . A . PASS END=1168448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,588:0,15,255:16,0 chr1 1168449 . C . PASS END=1168449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 1168450 . C . PASS END=1168450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr1 1168451 . G . PASS END=1168451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,510:0,4,255:15,0 chr1 1168452 . A . PASS END=1168452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 1168453 . A . PASS END=1168453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,584:0,26,255:18,0 chr1 1168454 . T . PASS END=1168455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr1 1168456 . C . PASS END=1168456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:16,0 chr1 1168457 . C . PASS END=1168459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 1168460 . T . PASS END=1168460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,512:0,10,255:16,0 chr1 1168461 . C . PASS END=1168462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1168463 . C . PASS END=1168463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,615:0,21,255:18,0 chr1 1168464 . G . PASS END=1168469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,637:0,43,255:19,0 chr1 1168470 . G . PASS END=1168471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,560:0,27,255:17,0 chr1 1168472 . A . PASS END=1168472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1168473 . G . PASS END=1168474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:17,0 chr1 1168475 . A . PASS END=1168477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:18,0 chr1 1168478 . C . PASS END=1168478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,549:0,10,255:14,0 chr1 1168479 . A . PASS END=1168483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,590:0,40,255:17,0 chr1 1168484 . C . PASS END=1168484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,488:0,7,255:14,0 chr1 1168485 . T . PASS END=1168485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 1168486 . G . PASS END=1168486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 1168487 . G . LowGQ END=1168487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,512:1,0,255:15,0 chr1 1168488 . T . PASS END=1168489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,529:0,34,255:16,0 chr1 1168490 . A . PASS END=1168501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,524:0,51,255:17,0 chr1 1168502 . A . PASS END=1168502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 1168503 . G . PASS END=1168508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1168509 . A . PASS END=1168509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:13,0 chr1 1168510 . G . PASS END=1168512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 1168513 . C . PASS END=1168513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,443:0,15,255:9,0 chr1 1168514 . A . PASS END=1168516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 1168517 . C . PASS END=1168517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:10,0 chr1 1168518 . T . PASS END=1168519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 1168520 . G . PASS END=1168520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:10,0 chr1 1168521 . A . PASS END=1168523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 1168524 . A . PASS END=1168524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,282:0,16,255:10,0 chr1 1168525 . G . PASS END=1168536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,329:0,33,255:13,0 chr1 1168537 . G . PASS END=1168547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:17,0 chr1 1168548 . G . PASS END=1168548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 1168549 . C . PASS END=1168550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1168551 . G . PASS END=1168551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1168552 . C . PASS END=1168557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,657:0,41,255:17,0 chr1 1168558 . C . PASS END=1168558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:16,0 chr1 1168559 . A . PASS END=1168565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 1168566 . A . PASS END=1168566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 1168567 . G . PASS END=1168585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 1168586 . T . PASS END=1168594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,495:0,32,255:13,0 chr1 1168595 . G . PASS END=1168595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:10,0 chr1 1168596 . A . PASS END=1168596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:10,0 chr1 1168597 . C . PASS END=1168599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 1168600 . G . PASS END=1168600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 1168601 . T . PASS END=1168601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 1168602 . C . PASS END=1168602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:10,0 chr1 1168603 . C . PASS END=1168625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 1168626 . A . PASS END=1168632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1168633 . G . PASS END=1168633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 1168634 . G . PASS END=1168641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr1 1168642 . C . PASS END=1168642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 1168643 . C . PASS END=1168648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 1177870 . T . PASS END=1177895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1332:0,92,255:38,0 chr1 1177896 . C . PASS END=1177896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 1177897 . G . PASS END=1178016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:37:0,87,1305:0,98,255:40,0 chr1 1178017 . A . PASS END=1178017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1235:0,56,255:27,0 chr1 1178018 . C . PASS END=1178022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 1178023 . C . PASS END=1178026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 1178215 . C . PASS END=1178293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,105,1529:0,113,255:40,0 chr1 1178442 . G . PASS END=1178530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,117,1800:0,117,255:40,0 chr1 1178531 . G . PASS END=1178546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,3:79:99:71:0,113,1800:0,113,255:40,0 chr1 1178824 . C . PASS END=1178843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1318:0,92,255:35,0 chr1 1178844 . A . PASS END=1178844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:34,0 chr1 1178845 . A . PASS END=1178909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1169:0,80,255:37,0 chr1 1178910 . A . PASS END=1178910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 1178911 . G . PASS END=1178920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 1178921 . T . PASS END=1178929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:25,0 chr1 1178930 . A . PASS END=1178932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,855:0,75,255:19,0 chr1 1179334 . A . PASS END=1179335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1179336 . C . PASS END=1179336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1179337 . C . PASS END=1179338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 1179339 . G . PASS END=1179341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 1179342 . A . PASS END=1179342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 1179343 . A . PASS END=1179343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:27,0 chr1 1179344 . C . PASS END=1179344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 1179345 . C . PASS END=1179345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 1179346 . A . PASS END=1179346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:30,0 chr1 1179347 . T . PASS END=1179347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr1 1179348 . G . PASS END=1179348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 1179349 . C . PASS END=1179362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1117:0,80,255:36,0 chr1 1179363 . T . PASS END=1179363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:35,0 chr1 1179364 . C . PASS END=1179398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1276:0,80,255:38,0 chr1 1179399 . A . PASS END=1179399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:32,0 chr1 1179400 . G . PASS END=1179432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1235:0,91,255:35,0 chr1 1179433 . C . PASS END=1179433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:28,0 chr1 1179434 . C . PASS END=1179436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 1179437 . T . PASS END=1179437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:27,0 chr1 1179438 . G . PASS END=1179443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1078:0,86,255:30,0 chr1 1179444 . G . PASS END=1179444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:29,0 chr1 1179445 . C . PASS END=1179451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1082:0,93,255:31,0 chr1 1179452 . T . PASS END=1179452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 1179453 . C . PASS END=1179453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 1179454 . C . PASS END=1179462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,79,255:26,0 chr1 1179463 . T . PASS END=1179463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:24,0 chr1 1179464 . G . PASS END=1179485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr1 1179571 . C . PASS END=1179571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,2 chr1 1179572 . T . LowGQ END=1179572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,659:6,0,255:17,2 chr1 1179573 . T . PASS END=1179573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 1179574 . T . PASS END=1179600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 1179601 . G . PASS END=1179606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:22,0 chr1 1179607 . C . PASS END=1179607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 1179608 . C . PASS END=1179608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 1179609 . G . PASS END=1179609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 1179610 . C . PASS END=1179612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1179613 . T . PASS END=1179615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 1179616 . C . PASS END=1179624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:24,0 chr1 1179625 . C . PASS END=1179625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 1179626 . T . PASS END=1179631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1179632 . T . PASS END=1179632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:22,0 chr1 1179633 . C . PASS END=1179645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:24,0 chr1 1179646 . A . PASS END=1179646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:21,0 chr1 1179647 . G . PASS END=1179647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1179648 . A . PASS END=1179648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 1179649 . G . PASS END=1179672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,914:0,72,255:25,0 chr1 1179673 . C . PASS END=1179673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 1179674 . A . PASS END=1179700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,869:0,69,255:24,0 chr1 1179701 . G . PASS END=1179701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 1179702 . G . PASS END=1179709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:24,0 chr1 1179710 . A . PASS END=1179724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 1179725 . G . PASS END=1179743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:26,0 chr1 1179744 . G . PASS END=1179744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1179745 . C . PASS END=1179812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 1179813 . C . PASS END=1179813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 1179814 . G . PASS END=1179815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1179816 . C . PASS END=1179816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1179817 . G . PASS END=1179820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1179821 . A . PASS END=1179821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:22,0 chr1 1179822 . A . PASS END=1179827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1179828 . A . PASS END=1179828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 1179829 . G . PASS END=1179840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:23,0 chr1 1179841 . G . PASS END=1179841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 1179842 . G . PASS END=1179848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr1 1179849 . G . PASS END=1179860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:21:0,52,746:0,52,255:20,0 chr1 1179861 . C . PASS END=1179862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1179863 . T . PASS END=1179873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:17,0 chr1 1179874 . A . PASS END=1179877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:15:0,38,585:0,38,255:13,0 chr1 1181894 . C . PASS END=1181932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 1181933 . G . PASS END=1181938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 1181939 . G . PASS END=1181939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 1181940 . G . PASS END=1181956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:22,0 chr1 1181957 . G . PASS END=1181957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 1181958 . C . PASS END=1181967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 1181968 . G . PASS END=1182005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,574:0,45,255:17,0 chr1 1182006 . C . PASS END=1182019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 1182020 . G . PASS END=1182032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr1 1182033 . A . PASS END=1182063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:6,0 chr1 1182064 . G . PASS END=1182070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,172:3,0 chr1 1190583 . T . PASS END=1190585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 1190586 . C . PASS END=1190611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,372:0,30,255:13,0 chr1 1190612 . A . PASS END=1190613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1190614 . T . PASS END=1190619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1190620 . G . PASS END=1190624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1190625 . A . PASS END=1190625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1190626 . G . PASS END=1190645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:17,0 chr1 1190646 . T . PASS END=1190646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 1190647 . A . PASS END=1190647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 1190648 . T . PASS END=1190648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 1190649 . C . PASS END=1190651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 1190652 . A . PASS END=1190652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 1190653 . A . PASS END=1190690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,392:0,53,255:19,0 chr1 1190691 . C . PASS END=1190691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 1190692 . C . PASS END=1190719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,660:0,54,255:19,0 chr1 1190720 . T . PASS END=1190724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1190725 . A . PASS END=1190728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 1190729 . C . PASS END=1190730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1190731 . C . PASS END=1190745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,751:0,47,255:19,0 chr1 1190746 . T . PASS END=1190749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 1190750 . G . PASS END=1190750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 1190751 . C . PASS END=1190764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:23,0 chr1 1190765 . T . PASS END=1190765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1190766 . C . PASS END=1190777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 1190778 . C . PASS END=1190778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 1190779 . G . PASS END=1190783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1190784 . C . PASS END=1190784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 1190785 . C . PASS END=1190806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 1190807 . A . PASS END=1190807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 1190808 . G . PASS END=1190811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr1 1190812 . A . PASS END=1190812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 1190813 . G . PASS END=1190823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 1190824 . C . PASS END=1190826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1190827 . C . PASS END=1190844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 1190845 . G . PASS END=1190845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 1190846 . C . PASS END=1190856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 1190857 . T . PASS END=1190867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 1191425 . C . PASS END=1191486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:38:0,91,1325:0,91,255:40,0 chr1 1191487 . G . PASS END=1191487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:31,0 chr1 1191488 . C . PASS END=1191505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1178:0,83,255:33,0 chr1 1192372 . C . PASS END=1192372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 1192373 . G . PASS END=1192384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 1192385 . G . PASS END=1192395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,893:0,63,255:25,0 chr1 1192396 . G . PASS END=1192476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1048:0,80,255:39,0 chr1 1192477 . G . PASS END=1192477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:27,0 chr1 1192478 . T . PASS END=1192480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1192481 . G . PASS END=1192485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1192486 . G . PASS END=1192490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1192491 . C . PASS END=1192510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 1192588 . C . PASS END=1192596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,984:0,68,255:26,0 chr1 1192597 . C . PASS END=1192611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:33,0 chr1 1192612 . T . PASS END=1192612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1028:0,71,255:31,0 chr1 1192613 . T . PASS END=1192690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:34:0,82,1169:0,82,255:40,0 chr1 1197640 . T . PASS END=1197770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,117,1800:0,117,255:40,0 chr1 1198726 . C . PASS END=1198766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,104,1800:0,104,255:40,0 chr1 1201478 . C . PASS END=1201481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 1201482 . C . PASS END=1201482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:29,0 chr1 1201483 . A . PASS END=1201490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 1201491 . C . PASS END=1201491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 1201492 . C . PASS END=1201512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1294:0,89,255:35,0 chr1 1201513 . A . PASS END=1201513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:31,0 chr1 1201514 . A . PASS END=1201517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:30,0 chr1 1201518 . T . PASS END=1201518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:26,0 chr1 1201519 . G . PASS END=1201522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 1201523 . G . PASS END=1201523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 1201524 . C . PASS END=1201525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 1201526 . G . PASS END=1201529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1094:0,77,255:26,0 chr1 1201530 . G . PASS END=1201535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 1201536 . T . PASS END=1201562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:24,0 chr1 1201563 . T . PASS END=1201564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 1201565 . G . PASS END=1201566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 1201567 . T . PASS END=1201567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 1201568 . A . PASS END=1201586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1201587 . T . PASS END=1201587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1201588 . G . PASS END=1201592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1201593 . T . PASS END=1201593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1201594 . C . PASS END=1201595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1201596 . T . PASS END=1201598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 1201599 . G . PASS END=1201600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1201601 . G . PASS END=1201605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 1201606 . A . PASS END=1201614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 1201615 . G . PASS END=1201617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 1201618 . C . PASS END=1201629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:22,0 chr1 1201630 . C . PASS END=1201630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 1201631 . C . PASS END=1201651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:24,0 chr1 1201652 . T . PASS END=1201652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 1201653 . C . PASS END=1201653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 1201654 . A . PASS END=1201654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 1201655 . C . PASS END=1201661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 1201662 . A . PASS END=1201663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr1 1201664 . C . PASS END=1201670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr1 1203113 . C . PASS END=1203123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 1203124 . G . PASS END=1203124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1203125 . T . PASS END=1203126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1203127 . C . PASS END=1203134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1203135 . C . PASS END=1203138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 1203139 . G . PASS END=1203140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1203141 . C . PASS END=1203143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 1203144 . T . PASS END=1203149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 1203238 . T . PASS END=1203356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:37:0,83,1207:0,83,255:40,0 chr1 1203357 . T . PASS END=1203357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:32,0 chr1 1203358 . G . PASS END=1203359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1341:0,95,255:34,0 chr1 1203360 . T . PASS END=1203360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:32,0 chr1 1203361 . G . PASS END=1203372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:34,0 chr1 1216042 . A . PASS END=1216046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr1 1216582 . A . PASS END=1216584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr1 1216585 . C . PASS END=1216594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1216595 . G . PASS END=1216596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr1 1216597 . C . PASS END=1216597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 1216598 . A . PASS END=1216613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:29,0 chr1 1216614 . T . PASS END=1216618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1216619 . C . PASS END=1216620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1216621 . G . PASS END=1216624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 1216625 . A . PASS END=1216692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,892:0,61,255:26,0 chr1 1216693 . T . PASS END=1216693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 1216694 . G . PASS END=1216703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 1216704 . T . PASS END=1216704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:20,0 chr1 1216705 . G . PASS END=1216729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,801:0,66,255:23,0 chr1 1216730 . A . PASS END=1216730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,683:0,49,255:19,0 chr1 1216731 . G . PASS END=1216731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1216732 . A . PASS END=1216732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr1 1216733 . G . PASS END=1216739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 1216740 . C . PASS END=1216740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 1216741 . A . PASS END=1216754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 1216755 . A . PASS END=1216755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 1216756 . G . PASS END=1216775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 1216776 . C . PASS END=1216790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,674:0,44,255:19,0 chr1 1216791 . G . PASS END=1216791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 1216792 . C . PASS END=1216799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 1216800 . G . PASS END=1216800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 1216801 . T . PASS END=1216811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,615:0,54,255:18,0 chr1 1216812 . T . PASS END=1216812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 1216813 . G . PASS END=1216844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:17,0 chr1 1216845 . T . PASS END=1216845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 1216846 . T . PASS END=1216865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,584:0,48,255:17,0 chr1 1216866 . C . PASS END=1216866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1216867 . A . PASS END=1216867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 1216868 . C . PASS END=1216868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 1216869 . C . PASS END=1216885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,584:0,45,255:17,0 chr1 1216886 . G . PASS END=1216886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1216887 . G . PASS END=1216899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 1216900 . G . PASS END=1216900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 1216901 . G . PASS END=1216901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1216902 . A . PASS END=1216903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,582:0,34,255:13,0 chr1 1216904 . G . PASS END=1216914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 1216915 . T . PASS END=1216949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 1216950 . C . PASS END=1216967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,288:0,24,255:8,0 chr1 1216968 . C . PASS END=1216968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 1216969 . C . PASS END=1216969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 1216970 . C . PASS END=1216971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 1216972 . A . PASS END=1216984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,210:0,18,210:6,0 chr1 1216985 . G . LowGQ END=1216985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:6,0 chr1 1216986 . G . PASS END=1216987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 1216988 . C . PASS END=1216990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 1217391 . G . PASS END=1217400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1217401 . C G, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=1.164;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,10,0:0.667,0.000:15:4,6,0:1,4,0:47:85,0,46,350,179,528:255,0,149:5,0:5.0000e+01,9.4226e-05,4.9312e+01,3.4956e+02,2.1360e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,7,3:3,2,5,5 chr1 1217402 . G . PASS END=1217406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 1217407 . A . PASS END=1217407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1217408 . A . PASS END=1217421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:16,0 chr1 1217422 . G . PASS END=1217422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 1217423 . G . PASS END=1217423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 1217424 . T . PASS END=1217424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 1217425 . G . PASS END=1217431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 1217432 . A . PASS END=1217432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,521:0,20,255:16,0 chr1 1217433 . A . PASS END=1217433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1217434 . G . PASS END=1217434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 1217435 . C . PASS END=1217438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1217439 . A . PASS END=1217444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,870:0,66,255:26,0 chr1 1217445 . G . PASS END=1217450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:30,0 chr1 1217451 . T . PASS END=1217451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:29,0 chr1 1217452 . G . PASS END=1217455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 1217456 . G . PASS END=1217456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 1217457 . G . PASS END=1217458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 1217459 . G . PASS END=1217459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 1217460 . G . PASS END=1217567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1130:0,92,255:40,0 chr1 1217622 . G . PASS END=1217699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,180,255:40,0 chr1 1219358 . G . PASS END=1219358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 1219359 . A . PASS END=1219359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 1219360 . G . PASS END=1219362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,909:0,75,255:26,0 chr1 1219363 . C . PASS END=1219364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 1219365 . G . PASS END=1219366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,976:0,45,255:27,0 chr1 1219367 . G . PASS END=1219368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:67:28:0,67,986:0,67,255:29,0 chr1 1219369 . C . PASS END=1219369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1219370 . T . PASS END=1219372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 1219373 . A . PASS END=1219373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:28,0 chr1 1219374 . T . PASS END=1219374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 1219375 . C . PASS END=1219375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1219376 . C . PASS END=1219376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 1219377 . T . PASS END=1219377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr1 1219378 . G . PASS END=1219378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 1219379 . C . PASS END=1219380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:30,0 chr1 1219381 . T . PASS END=1219381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 1219382 . C . PASS END=1219383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:31,0 chr1 1219384 . G . PASS END=1219384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:30,0 chr1 1219385 . A . PASS END=1219387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:31,0 chr1 1219388 . T . PASS END=1219388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr1 1219389 . G . PASS END=1219389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 1219390 . C . PASS END=1219391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr1 1219392 . A . PASS END=1219392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1108:0,49,255:30,0 chr1 1219393 . G . PASS END=1219393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 1219394 . C . PASS END=1219394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1219395 . T . PASS END=1219396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 1219397 . C . PASS END=1219398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 1219399 . C . PASS END=1219399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:29,0 chr1 1219400 . C . PASS END=1219404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:29,0 chr1 1219405 . A . PASS END=1219406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:29,0 chr1 1219407 . G . PASS END=1219409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:29,0 chr1 1219410 . T . PASS END=1219410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1024:0,38,255:29,0 chr1 1219411 . G . PASS END=1219411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:29,0 chr1 1219412 . A . PASS END=1219413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 1219414 . C . PASS END=1219414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1219415 . A . PASS END=1219415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr1 1219416 . C . PASS END=1219416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 1219417 . C . PASS END=1219417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1219418 . G . PASS END=1219418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 1219419 . A . PASS END=1219419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 1219420 . A . PASS END=1219420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1019:0,51,255:26,0 chr1 1219421 . G . PASS END=1219422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1219423 . A . PASS END=1219425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr1 1219426 . G . PASS END=1219435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,64,255:25,0 chr1 1219436 . T . PASS END=1219437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr1 1219438 . G . PASS END=1219438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:22,0 chr1 1219439 . A . PASS END=1219439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 1219440 . A . PASS END=1219440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:20,0 chr1 1219441 . G . PASS END=1219441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,840:0,39,255:20,0 chr1 1219442 . C . PASS END=1219442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1219443 . A . PASS END=1219444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:19,0 chr1 1219445 . C . PASS END=1219445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1219446 . C . PASS END=1219447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:19,0 chr1 1219448 . C . PASS END=1219449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:18,0 chr1 1219450 . C . PASS END=1219450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,759:0,22,255:14,0 chr1 1219451 . G . PASS END=1219456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:21:0,42,630:0,47,255:15,0 chr1 1219457 . G . PASS END=1219457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:13,0 chr1 1219458 . C . PASS END=1219458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:20:0,42,630:0,44,255:13,0 chr1 1219459 . T . LowGQ END=1219459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,576:18,0,255:13,0 chr1 1219460 . C . PASS END=1219461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:31:16:0,31,535:0,31,255:13,0 chr1 1219462 . C . PASS END=1219467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:21:15:0,21,315:0,29,255:9,0 chr1 1219468 . C . PASS END=1219468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:6,0 chr1 1219469 . A . PASS END=1219470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:21:14:0,21,315:0,25,255:6,0 chr1 1220805 . A . PASS END=1220807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 1220808 . G . PASS END=1220834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 1220835 . C . PASS END=1220872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:18,0 chr1 1220873 . A . PASS END=1220873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 1220874 . A . PASS END=1220883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,554:0,54,255:18,0 chr1 1220884 . G . PASS END=1220895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 1220896 . G . PASS END=1220898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,770:0,30,255:21,0 chr1 1220899 . C . PASS END=1220911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,892:0,66,255:23,0 chr1 1220912 . G . PASS END=1220912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 1220913 . G . PASS END=1220941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,870:0,72,255:26,0 chr1 1220942 . T . PASS END=1220942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,844:0,59,255:24,0 chr1 1220943 . T . PASS END=1220955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,909:0,65,255:26,0 chr1 1220956 . C . PASS END=1220974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 1220975 . G . PASS END=1221031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:26,0 chr1 1221032 . C . PASS END=1221032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr1 1221033 . A . PASS END=1221033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 1221034 . A . PASS END=1221035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1221036 . C . PASS END=1221044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,52,255:17,0 chr1 1221306 . G . PASS END=1221307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 1221308 . T . PASS END=1221308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 1221309 . G . PASS END=1221313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1221314 . C . PASS END=1221314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 1221315 . C . PASS END=1221435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1219:0,84,255:40,0 chr1 1221436 . A . PASS END=1221436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:34,0 chr1 1221437 . T . PASS END=1221440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1351:0,97,255:35,0 chr1 1221441 . A . PASS END=1221441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1335:0,62,255:32,0 chr1 1221442 . C . PASS END=1221469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1311:0,89,255:37,0 chr1 1221470 . C . PASS END=1221470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:30,0 chr1 1221471 . T . PASS END=1221479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 1221480 . A . PASS END=1221480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:27,0 chr1 1221481 . A . PASS END=1221481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 1221482 . C . PASS END=1221484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1221485 . C . PASS END=1221495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 1221496 . C . PASS END=1221498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1221499 . C . PASS END=1221503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1221504 . G . PASS END=1221504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1059:0,60,255:27,0 chr1 1221505 . G . PASS END=1221507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 1221508 . T . PASS END=1221509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 1221510 . C . PASS END=1221514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 1221515 . C . PASS END=1221515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 1221516 . C . PASS END=1221518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1221519 . G . PASS END=1221519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr1 1221520 . G . PASS END=1221520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1221521 . A . PASS END=1221521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:29,0 chr1 1221522 . G . PASS END=1221524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr1 1221525 . C . PASS END=1221525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:29,0 chr1 1221526 . T . PASS END=1221540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:30,0 chr1 1221541 . G . PASS END=1221541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr1 1221542 . G . PASS END=1221543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1221544 . A . PASS END=1221544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:27,0 chr1 1221545 . G . PASS END=1221545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 1221546 . C . PASS END=1221590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1062:0,80,255:35,0 chr1 1221591 . G . PASS END=1221591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:30,0 chr1 1221592 . C . PASS END=1221594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:32,0 chr1 1221595 . T . PASS END=1221595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:30,0 chr1 1221596 . C . PASS END=1221607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 1221608 . G . PASS END=1221626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 1221627 . C . PASS END=1221627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 1221628 . T . PASS END=1221630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 1221631 . T . PASS END=1221631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 1221632 . C . PASS END=1221645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 1221646 . G . PASS END=1221658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 1222148 . G . PASS END=1222167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 1222168 . A . PASS END=1222168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 1222169 . T . PASS END=1222210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,682:0,57,255:19,0 chr1 1222211 . C . PASS END=1222234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,807:0,63,255:22,0 chr1 1222235 . A . PASS END=1222235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,648:0,52,255:22,0 chr1 1222236 . G . PASS END=1222238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 1222239 . A . PASS END=1222239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 1222240 . G . PASS END=1222253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 1222254 . G . PASS END=1222254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 1222255 . C . PASS END=1222258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 1222259 . T . PASS END=1222259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:20,0 chr1 1222260 . G . PASS END=1222260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 1222261 . T . PASS END=1222266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 1222267 . G . PASS END=1222267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 1222268 . C . PASS END=1222280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 1222281 . T . PASS END=1222288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:20:0,53,812:0,53,255:19,0 chr1 1222289 . G . PASS END=1222290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1222291 . A . PASS END=1222291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 1222292 . C . PASS END=1222292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:17,0 chr1 1222293 . C . PASS END=1222294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 1222295 . G . PASS END=1222295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:17,0 chr1 1222296 . G . PASS END=1222304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,721:0,47,255:19,0 chr1 1222305 . C . PASS END=1222305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 1222306 . T . PASS END=1222337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,568:0,41,255:17,0 chr1 1222338 . A . PASS END=1222338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 1222339 . G . PASS END=1222339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1222340 . A . PASS END=1222340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:15,0 chr1 1222341 . G . PASS END=1222343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1222344 . G . PASS END=1222344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 1222345 . G . PASS END=1222347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 1222348 . T . PASS END=1222348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 1222349 . C . PASS END=1222350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 1222351 . G . PASS END=1222351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1222352 . A . PASS END=1222355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:16,0 chr1 1222489 . T . PASS END=1222494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:24,0 chr1 1222495 . A . PASS END=1222495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 1222496 . G . PASS END=1222497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:25,0 chr1 1222498 . A . PASS END=1222498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 1222499 . C . PASS END=1222502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 1222503 . C . PASS END=1222503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 1222504 . G . PASS END=1222505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 1222506 . C . PASS END=1222506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 1222507 . G . PASS END=1222507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1222508 . A . PASS END=1222508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 1222509 . C . PASS END=1222521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr1 1222522 . G . PASS END=1222527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 1222528 . A . PASS END=1222528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 1222529 . C . PASS END=1222540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:31,0 chr1 1222541 . C . PASS END=1222541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 1222542 . G . PASS END=1222564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:32,0 chr1 1222565 . T . PASS END=1222565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 1222566 . C . PASS END=1222577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 1222578 . T . PASS END=1222579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1222580 . T . PASS END=1222586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1222587 . C . PASS END=1222587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1222588 . C . PASS END=1222588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1222589 . T . PASS END=1222609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 1222610 . A . PASS END=1222610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 1222611 . C . PASS END=1222614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1222615 . C . PASS END=1222615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 1222616 . A . PASS END=1222616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1222617 . C . PASS END=1222617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 1222618 . G . PASS END=1222631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1222632 . C . PASS END=1222632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 1222633 . C . PASS END=1222635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1222636 . T . PASS END=1222636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,656:0,52,255:22,0 chr1 1222637 . T . PASS END=1222637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1222638 . C . PASS END=1222638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 1222639 . G . PASS END=1222657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 1222658 . A . PASS END=1222679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 1222888 . A . PASS END=1222901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:18,0 chr1 1222902 . T . PASS END=1222902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 1222903 . C . PASS END=1222912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 1222913 . A . PASS END=1222919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 1222920 . G . PASS END=1222923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1222924 . C . PASS END=1222924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1222925 . T . PASS END=1222925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 1222926 . G . PASS END=1222939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 1222940 . G . PASS END=1222941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1222942 . C . PASS END=1222942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1222943 . G . PASS END=1222946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1222947 . G . PASS END=1222950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1222951 . A . PASS END=1223007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,665:0,41,255:19,0 chr1 1223038 . C . PASS END=1223040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 1223041 . T . PASS END=1223041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 1223042 . T . PASS END=1223046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 1223047 . T . PASS END=1223047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 1223048 . C . PASS END=1223096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 1223097 . C . PASS END=1223116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:18,0 chr1 1223117 . C . PASS END=1223117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 1223118 . A . PASS END=1223118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 1223119 . T . PASS END=1223119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 1223120 . C . PASS END=1223120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 1223121 . A . PASS END=1223140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 1223141 . T . PASS END=1223141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 1223142 . A . PASS END=1223154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 1223155 . T . PASS END=1223155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 1223156 . C . PASS END=1223157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1223158 . T . PASS END=1223158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 1223159 . G . PASS END=1223171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1223172 . T . PASS END=1223172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 1223173 . T . PASS END=1223211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,809:0,66,255:23,0 chr1 1223212 . G . PASS END=1223216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1223319 . G . PASS END=1223322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1223323 . A . PASS END=1223359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:25,0 chr1 1223360 . C . PASS END=1223360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 1223361 . G . PASS END=1223394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,833:0,72,255:24,0 chr1 1223395 . A . PASS END=1223395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 1223396 . C . PASS END=1223396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 1223397 . A . PASS END=1223397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 1223398 . A . PASS END=1223405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1223406 . T . PASS END=1223407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,782:0,50,255:20,0 chr1 1223408 . C . PASS END=1223408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1223409 . A . PASS END=1223409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 1223410 . C . PASS END=1223413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 1223414 . G . PASS END=1223414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 1223415 . C . PASS END=1223415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1223416 . A . PASS END=1223416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 1223417 . G . PASS END=1223417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1225651 . G . PASS END=1225678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,880:0,75,255:26,0 chr1 1225679 . T . PASS END=1225682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 1225683 . G . PASS END=1225728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1031:0,81,255:34,0 chr1 1225729 . G . PASS END=1225729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 1225730 . G . PASS END=1225736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 1225737 . G . PASS END=1225739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1225740 . C . PASS END=1225746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 1225747 . T . PASS END=1225747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1225748 . C . PASS END=1225748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 1225749 . T . PASS END=1225750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1225751 . C . PASS END=1225751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 1225752 . C . PASS END=1225758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1225759 . C . PASS END=1225768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 1225857 . G . PASS END=1225908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,653:0,41,255:19,0 chr1 1225909 . T . PASS END=1225912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 1225913 . T . PASS END=1225913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1225914 . C . PASS END=1225915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1225916 . C . PASS END=1225921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 1225922 . C . PASS END=1225935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,798:0,50,255:19,0 chr1 1226017 . G . PASS END=1226068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,862:0,61,255:26,0 chr1 1226069 . T . PASS END=1226069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:19,0 chr1 1226070 . C . PASS END=1226074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 1226275 . G . PASS END=1226280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,714:0,44,255:19,0 chr1 1226281 . A . PASS END=1226310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:24,0 chr1 1226311 . C . PASS END=1226322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,894:0,72,255:25,0 chr1 1226323 . C . PASS END=1226323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 1226324 . A . PASS END=1226333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 1226445 . G . PASS END=1226491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:38:0,87,1366:0,87,255:40,0 chr1 1226492 . G . PASS END=1226492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1279:0,67,255:32,0 chr1 1226493 . C . PASS END=1226514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1260:0,92,255:33,0 chr1 1226515 . T . PASS END=1226515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:30,0 chr1 1226516 . A . PASS END=1226517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 1226518 . T . PASS END=1226518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:29,0 chr1 1226519 . C . PASS END=1226520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1247:0,86,255:30,0 chr1 1226634 . G . PASS END=1226638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 1226639 . G . PASS END=1226639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr1 1226640 . C . PASS END=1226640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1226641 . A . PASS END=1226673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,820:0,61,255:26,0 chr1 1226674 . T . PASS END=1226681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 1226682 . G . PASS END=1226701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 1226702 . C . PASS END=1226702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 1226703 . C . PASS END=1226708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 1226709 . C . PASS END=1226709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 1226710 . T . PASS END=1226717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1226718 . C . PASS END=1226720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1226721 . C . PASS END=1226728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1226729 . T . PASS END=1226730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1226731 . C . PASS END=1226732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 1226733 . T . PASS END=1226735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1226736 . G . PASS END=1226738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1226739 . C . PASS END=1226787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 1226788 . G . PASS END=1226788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1226789 . G . PASS END=1226790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 1226791 . C . PASS END=1226791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr1 1226792 . C . PASS END=1226804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,592:0,48,255:17,0 chr1 1226805 . G . PASS END=1226805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 1226806 . C . PASS END=1226819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,668:0,54,255:18,0 chr1 1226820 . A . PASS END=1226820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 1226821 . G . PASS END=1226823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1226824 . T . PASS END=1226824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 1226825 . C . PASS END=1226826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 1226827 . A . PASS END=1226827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:13,0 chr1 1226828 . G . PASS END=1226832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 1226833 . A . PASS END=1226833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 1226834 . G . PASS END=1226851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,623:0,54,255:18,0 chr1 1226852 . G . PASS END=1226852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 1226853 . C . PASS END=1226854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 1226855 . T . PASS END=1226855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr1 1226856 . G . PASS END=1226872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,619:0,51,255:17,0 chr1 1226873 . T . PASS END=1226873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 1226874 . G . PASS END=1226878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 1226879 . G . PASS END=1226879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:13,0 chr1 1226880 . G . PASS END=1226886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 1226887 . G . PASS END=1226887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 1226888 . C . PASS END=1226895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1226896 . A . PASS END=1226896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 1226897 . T . LowGQ END=1226897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,347:15,0,255:12,0 chr1 1226898 . C . PASS END=1226910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr1 1226911 . T . PASS END=1226929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,480:0,39,255:13,0 chr1 1226930 . G . PASS END=1226937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 1226938 . C . PASS END=1226945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 1226946 . G . PASS END=1226965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:9:0,24,341:0,27,255:9,0 chr1 1226966 . G . PASS END=1226975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 1226976 . A . PASS END=1226984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 1226985 . A . LowGQ END=1226985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:6,0 chr1 1226986 . C . PASS END=1226990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 1228944 . C . PASS END=1228944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 1228945 . T . PASS END=1228945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 1228946 . A . PASS END=1228946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 1228947 . G . PASS END=1228947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 1228948 . C . PASS END=1228951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 1228952 . C . PASS END=1228954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 1228955 . C . PASS END=1228957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 1228958 . G . PASS END=1228958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 1228959 . G . PASS END=1228959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 1228960 . T . PASS END=1228965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 1228966 . C . PASS END=1228975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr1 1228976 . C . PASS END=1228984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 1228985 . A . PASS END=1228985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 1228986 . C . PASS END=1229011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:11,0 chr1 1229012 . T . PASS END=1229012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:10,0 chr1 1229013 . G . PASS END=1229027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 1229028 . C . PASS END=1229028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 1229029 . G . PASS END=1229040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 1229041 . G . PASS END=1229041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 1229042 . C . PASS END=1229045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1229046 . C . PASS END=1229046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 1229047 . T . PASS END=1229060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 1229061 . T . PASS END=1229061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 1229062 . T . PASS END=1229064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 1229065 . T . PASS END=1229071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 1229072 . T . PASS END=1229072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 1229073 . G . PASS END=1229088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr1 1229203 . A . PASS END=1229213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 1229214 . G . PASS END=1229214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 1229215 . T . PASS END=1229217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 1229218 . G . PASS END=1229218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 1229219 . C . PASS END=1229224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 1229225 . C . PASS END=1229225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 1229226 . C . PASS END=1229226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 1229227 . G . PASS END=1229227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 1229228 . C . PASS END=1229232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 1229233 . A . PASS END=1229233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 1229234 . C . PASS END=1229238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 1229239 . A . PASS END=1229239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 1229240 . T . PASS END=1229268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 1229269 . A . PASS END=1229269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 1229270 . G . PASS END=1229285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,629:0,48,255:17,0 chr1 1229286 . G . PASS END=1229286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 1229287 . C . PASS END=1229289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1229290 . C . PASS END=1229293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1229294 . T . PASS END=1229294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 1229295 . C . PASS END=1229295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1229296 . A . PASS END=1229297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr1 1229298 . G . PASS END=1229311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 1229312 . G . PASS END=1229312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 1229313 . G . PASS END=1229313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1229470 . C . PASS END=1229477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:19,0 chr1 1229478 . G . PASS END=1229495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,970:0,72,255:26,0 chr1 1229496 . G . PASS END=1229520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:31,0 chr1 1229521 . T . PASS END=1229521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 1229522 . C . PASS END=1229554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:89:30:0,89,1097:0,89,255:33,0 chr1 1229555 . G . PASS END=1229555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 1229556 . G . PASS END=1229568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1133:0,87,255:30,0 chr1 1229569 . A . PASS END=1229571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1229572 . A . PASS END=1229572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr1 1229573 . A . PASS END=1229579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:20,0 chr1 1229782 . C . LowGQ END=1229783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,335:3,0,255:9,0 chr1 1229784 . C . PASS END=1229784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 1229785 . T . LowGQ END=1229785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:9,0 chr1 1229786 . A . PASS END=1229787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 1229788 . C . PASS END=1229788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 1229789 . A . LowGQ END=1229793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:3,0,255:9,0 chr1 1229794 . C . PASS END=1229794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 1229795 . T . LowGQ END=1229798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,239:9,0,255:9,0 chr1 1229799 . C . PASS END=1229800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 1229801 . A . LowGQ END=1229802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:9,0 chr1 1229803 . C . PASS END=1229803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 1229804 . G . LowGQ END=1229806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 1229807 . G . PASS END=1229808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,329:0,33,255:11,0 chr1 1229809 . C . LowGQ END=1229811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 1229812 . G . PASS END=1229813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:13,0 chr1 1229814 . C . LowGQ END=1229815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:13:0,0,426:0,0,255:13,0 chr1 1229816 . T . PASS END=1229816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 1229817 . C . PASS END=1229817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 1229818 . A . PASS END=1229819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr1 1229820 . C . PASS END=1229821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 1229822 . T . PASS END=1229822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:12,0 chr1 1229823 . C . PASS END=1229823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1229824 . C . PASS END=1229824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:12,0 chr1 1229825 . G . PASS END=1229825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1229826 . C . PASS END=1229826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 1229827 . G . PASS END=1229827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1229828 . T . PASS END=1229828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:15,0 chr1 1229829 . C . PASS END=1229831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 1229832 . C . PASS END=1229833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:14,0 chr1 1229834 . C . PASS END=1229834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1229835 . A . PASS END=1229835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr1 1229836 . G . PASS END=1229836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1229837 . T . LowGQ END=1229839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,457:0,0,255:13,0 chr1 1229840 . A . PASS END=1229840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:13,0 chr1 1229841 . C . PASS END=1229860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 1229861 . G . PASS END=1229861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 1229862 . C . PASS END=1229901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 1229902 . G . PASS END=1229908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 1229909 . A . PASS END=1229909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr1 1229910 . A . PASS END=1229911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr1 1229912 . A . PASS END=1229912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,669:0,52,255:22,0 chr1 1229913 . G . PASS END=1229933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:26,0 chr1 1229934 . C . PASS END=1229952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1229953 . C . PASS END=1229956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 1229957 . G . PASS END=1229967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:29,0 chr1 1229968 . C . PASS END=1229968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr1 1229969 . C . PASS END=1229969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 1229970 . C . PASS END=1229977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 1229978 . T . PASS END=1230008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:25,0 chr1 1230098 . C . PASS END=1230102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,74,255:26,0 chr1 1230103 . T . PASS END=1230110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 1230111 . G . PASS END=1230113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1230114 . G . PASS END=1230136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1141:0,90,255:31,0 chr1 1230137 . A . PASS END=1230137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 1230138 . A . PASS END=1230141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 1230142 . A . PASS END=1230142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1007:0,48,255:28,0 chr1 1230143 . G . PASS END=1230174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 1230175 . A . PASS END=1230190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 1230191 . T . PASS END=1230196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 1230827 . T . PASS END=1230839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,780:0,69,255:25,0 chr1 1230840 . C . PASS END=1230840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 1230841 . C . PASS END=1230850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 1230851 . C . PASS END=1230851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr1 1230852 . T . PASS END=1230864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 1230865 . G . PASS END=1230867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1230868 . A . PASS END=1230869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1230870 . G . PASS END=1230884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 1230885 . G . PASS END=1230888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:27,0 chr1 1230889 . G . PASS END=1230924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:30,0 chr1 1230925 . A . PASS END=1230925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 1230926 . G . PASS END=1230933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 1230934 . A . PASS END=1230934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 1231116 . C . PASS END=1231142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,519:0,42,255:19,0 chr1 1231143 . G . PASS END=1231146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1231147 . G . PASS END=1231147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1231148 . G . PASS END=1231181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,869:0,65,255:26,0 chr1 1231182 . C . PASS END=1231182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:24,0 chr1 1231183 . G . PASS END=1231191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 1231192 . G . PASS END=1231195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 1231196 . T . PASS END=1231196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 1231197 . G . PASS END=1231197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 1231198 . G . PASS END=1231198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 1231199 . G . PASS END=1231205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 1231206 . G . PASS END=1231219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,74,255:24,0 chr1 1231220 . C . PASS END=1231220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1231221 . T . PASS END=1231221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 1231222 . C . PASS END=1231231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 1231232 . G . PASS END=1231236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 1231237 . C . PASS END=1231239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1231240 . C . PASS END=1231242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1088:0,79,255:26,0 chr1 1231243 . G . PASS END=1231244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1145:0,80,255:27,0 chr1 1231245 . C . PASS END=1231246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:28:0,63,947:0,63,255:26,0 chr1 1231247 . G . PASS END=1231253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,958:0,84,255:28,0 chr1 1231254 . T . PASS END=1231264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1231265 . C . PASS END=1231267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 1231268 . A . PASS END=1231290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,925:0,64,255:26,0 chr1 1231291 . G . PASS END=1231303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 1231304 . G . PASS END=1231318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,870:0,64,255:26,0 chr1 1231395 . C . PASS END=1231489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:40:0,93,1504:0,93,255:40,0 chr1 1231591 . C . PASS END=1231653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr1 1231654 . C . PASS END=1231660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:24,0 chr1 1231805 . C . PASS END=1231805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 1231806 . T . PASS END=1231806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:15,0 chr1 1231807 . G . PASS END=1231807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 1231808 . T . PASS END=1231810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 1231811 . A . PASS END=1231812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,580:0,35,255:17,0 chr1 1231813 . G . PASS END=1231815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr1 1231816 . G . PASS END=1231816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 1231817 . G . PASS END=1231825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,668:0,44,255:19,0 chr1 1231826 . A . PASS END=1231827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1231828 . G . PASS END=1231828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 1231829 . C . PASS END=1231844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,825:0,66,255:23,0 chr1 1231845 . G . PASS END=1231845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 1231846 . G . PASS END=1231848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1231849 . G . PASS END=1231851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr1 1231852 . G . PASS END=1231859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,837:0,69,255:25,0 chr1 1231860 . A . PASS END=1231860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 1231861 . G . PASS END=1231866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 1231867 . G . PASS END=1231870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 1231871 . G . PASS END=1231871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 1231872 . G . PASS END=1231873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1231874 . T . PASS END=1231874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:26,0 chr1 1231875 . G . PASS END=1231878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 1231879 . G . PASS END=1231879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 1231880 . C . PASS END=1231880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 1231881 . A . PASS END=1231882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:27:0,74,1100:0,74,255:28,0 chr1 1231883 . T . PASS END=1231911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1070:0,87,255:30,0 chr1 1231912 . C . PASS END=1231912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 1231913 . T . PASS END=1231914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1231915 . C . PASS END=1231920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:27,0 chr1 1231921 . C . PASS END=1231922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:28,0 chr1 1231923 . G . PASS END=1231924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:31:0,49,1084:0,49,255:27,0 chr1 1231925 . A . PASS END=1231927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1231928 . A . PASS END=1231930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 1231931 . C . PASS END=1231931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1231932 . T . PASS END=1231932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 1231933 . C . PASS END=1231933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1231934 . T . PASS END=1231937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 1231938 . C . PASS END=1231941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1231942 . C . PASS END=1231966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,870:0,61,255:26,0 chr1 1231967 . G . PASS END=1231967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 1231968 . C . PASS END=1231972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 1231973 . T . PASS END=1231973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 1231974 . C . PASS END=1231974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1231975 . G . PASS END=1231975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 1231976 . A . PASS END=1231978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 1231979 . C . PASS END=1231979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 1231980 . T . PASS END=1231981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 1231982 . C . PASS END=1231983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 1231984 . C . PASS END=1231984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr1 1231985 . G . PASS END=1231985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 1231986 . T . PASS END=1231992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 1231993 . G . PASS END=1231995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 1231996 . T . PASS END=1231998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 1231999 . T . PASS END=1231999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 1232000 . G . PASS END=1232001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 1232002 . G . PASS END=1232013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 1233202 . C . PASS END=1233204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 1233205 . G . PASS END=1233206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 1233207 . T . PASS END=1233207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,746:0,30,255:22,0 chr1 1233208 . A . PASS END=1233213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 1233214 . A . PASS END=1233214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 1233215 . C . PASS END=1233229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr1 1233230 . C . PASS END=1233230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 1233231 . G . PASS END=1233256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:25,0 chr1 1233257 . A . PASS END=1233269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:19:0,54,810:0,56,255:19,0 chr1 1233270 . A . PASS END=1233270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:17,0 chr1 1233271 . G . PASS END=1233294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr1 1233295 . A . PASS END=1233295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 1233296 . G . PASS END=1233297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 1233298 . C . PASS END=1233301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1233302 . A . PASS END=1233307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 1233308 . C . PASS END=1233308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,624:0,13,255:14,0 chr1 1233309 . A . PASS END=1233313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr1 1233393 . T . PASS END=1233400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 1233401 . T . PASS END=1233404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 1233405 . A . PASS END=1233405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 1233406 . G . PASS END=1233407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1233408 . A . PASS END=1233408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 1233409 . C . PASS END=1233412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1233413 . G . PASS END=1233418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,856:0,64,255:26,0 chr1 1233419 . G . PASS END=1233423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1233424 . T . PASS END=1233424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1233425 . C . PASS END=1233432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1233433 . T . PASS END=1233435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1233436 . C . PASS END=1233436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1233437 . C . PASS END=1233437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 1233438 . T . PASS END=1233442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1233443 . C . PASS END=1233469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,972:0,70,255:26,0 chr1 1233470 . A . PASS END=1233470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 1233471 . T . PASS END=1233491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 1233492 . T . PASS END=1233492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 1233493 . C . PASS END=1233493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1233750 . C . PASS END=1233770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,744:0,63,255:22,0 chr1 1233771 . C . PASS END=1233771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 1233772 . A . PASS END=1233778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,860:0,69,255:23,0 chr1 1233779 . T . PASS END=1233780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 1233781 . T . PASS END=1233787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,898:0,69,255:24,0 chr1 1233788 . T . PASS END=1233788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr1 1233789 . G . PASS END=1233792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 1233793 . A . PASS END=1233793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr1 1233794 . A . PASS END=1233801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,862:0,72,255:24,0 chr1 1233947 . C . PASS END=1233947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:20,0 chr1 1233948 . G . LowGQ END=1233948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,590:6,0,255:19,0 chr1 1233949 . G . PASS END=1233949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1233950 . T . PASS END=1233951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,590:0,16,255:19,0 chr1 1233952 . C . LowGQ END=1233952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,610:14,0,255:18,0 chr1 1233953 . C . PASS END=1233953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1233954 . A . PASS END=1233954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:2:22:0,2,657:0,2,255:19,0 chr1 1233955 . T . PASS END=1233956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,623:0,33,255:19,0 chr1 1233957 . T . LowGQ END=1233957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,585:28,0,255:18,0 chr1 1233958 . C . PASS END=1233958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 1233959 . T . PASS END=1233959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,653:0,33,255:20,0 chr1 1233960 . T . PASS END=1233960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 1233961 . G . PASS END=1233961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:19,0 chr1 1233962 . A . PASS END=1233964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1233965 . G . LowGQ END=1233965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,643:3,0,255:20,0 chr1 1233966 . C . PASS END=1233966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1233967 . G . PASS END=1233967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,722:0,22,255:20,0 chr1 1233968 . T . PASS END=1233968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1233969 . T . PASS END=1233969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:23,0 chr1 1233970 . G . LowGQ END=1233970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,792:2,0,255:23,0 chr1 1233971 . C . PASS END=1233971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:24,0 chr1 1233972 . T . PASS END=1233972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 1233973 . G . PASS END=1233973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1233974 . G . PASS END=1233974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 1233975 . C . PASS END=1233977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 1233978 . T . PASS END=1233978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,876:0,39,255:25,0 chr1 1233979 . C . PASS END=1233980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,818:0,64,255:26,0 chr1 1233981 . T . PASS END=1233981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr1 1233982 . G . PASS END=1233984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 1233985 . G . PASS END=1233986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,856:0,42,255:25,0 chr1 1233987 . G . PASS END=1234003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:25,0 chr1 1234004 . A . PASS END=1234004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,815:0,45,255:20,0 chr1 1234005 . C . PASS END=1234018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,898:0,62,255:22,0 chr1 1234019 . T . PASS END=1234019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 1234020 . C . PASS END=1234028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 1234029 . A . PASS END=1234029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,562:0,43,255:19,0 chr1 1234030 . C . PASS END=1234054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,707:0,63,255:21,0 chr1 1234055 . A . PASS END=1234055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,613:0,30,255:15,0 chr1 1234056 . A . PASS END=1234059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:17,0 chr1 1234725 . C . PASS END=1234733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1234734 . C . PASS END=1234735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 1234736 . T . PASS END=1234736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 1235211 . C . PASS END=1235228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 1235229 . G . PASS END=1235229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:16,0 chr1 1235230 . T . PASS END=1235246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 1235247 . A . PASS END=1235247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1235248 . C . PASS END=1235275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,523:0,45,255:16,0 chr1 1235276 . G . PASS END=1235276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:14,0 chr1 1235277 . C . PASS END=1235280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1235281 . T . PASS END=1235281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:14,0 chr1 1235282 . C . PASS END=1235283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1235284 . A . PASS END=1235284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr1 1235285 . G . PASS END=1235285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr1 1235353 . C . PASS END=1235368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 1235369 . T . PASS END=1235369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 1235370 . T . PASS END=1235395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 1235396 . A . PASS END=1235398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 1235399 . C . PASS END=1235414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:10,0 chr1 1235415 . A . PASS END=1235416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1235417 . A . PASS END=1235424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1235425 . C . PASS END=1235448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 1235538 . A . PASS END=1235547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 1235548 . A . PASS END=1235548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 1235549 . T . PASS END=1235552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 1235553 . A . PASS END=1235553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 1235554 . A . PASS END=1235554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 1235555 . A . PASS END=1235555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 1235556 . C . PASS END=1235564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 1235565 . G . PASS END=1235565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 1235566 . G . PASS END=1235567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 1235568 . C . PASS END=1235568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 1235569 . T . PASS END=1235582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:15,0 chr1 1235889 . C . PASS END=1235890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1235891 . G . PASS END=1235900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,405:0,33,255:12,0 chr1 1235901 . G . PASS END=1235905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1235906 . G . PASS END=1235906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 1235907 . T . PASS END=1235952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,537:0,48,255:17,0 chr1 1235953 . G . PASS END=1235956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 1235957 . C . PASS END=1235978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 1235979 . C . PASS END=1236038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 1236039 . C . PASS END=1236056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 1236057 . G . PASS END=1236065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 1236066 . C . PASS END=1236072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1237368 . T . PASS END=1237387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,593:0,54,255:19,0 chr1 1237388 . C . PASS END=1237389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 1237390 . G . PASS END=1237390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1237391 . C . PASS END=1237391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1237392 . T . PASS END=1237426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:18:0,47,668:0,47,255:19,0 chr1 1238302 . C . PASS END=1238318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1266:0,89,255:35,0 chr1 1238319 . C . PASS END=1238319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:32,0 chr1 1238320 . C . PASS END=1238340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,95,255:35,0 chr1 1238341 . C . PASS END=1238341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:29,0 chr1 1238342 . C . PASS END=1238349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:31,0 chr1 1238350 . A . PASS END=1238350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:31,0 chr1 1238351 . C . PASS END=1238355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 1238512 . C . PASS END=1238629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1233:0,86,255:40,0 chr1 1238630 . G . PASS END=1238630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 1238631 . C . PASS END=1238634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 1238635 . C . PASS END=1238635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 1238636 . A . PASS END=1238636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1238637 . C . PASS END=1238640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr1 1238641 . G . PASS END=1238650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:48:27:0,48,765:0,48,255:20,0 chr1 1238651 . A . PASS END=1238651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:16,0 chr1 1238652 . G . PASS END=1238659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:18,0 chr1 1238660 . A . PASS END=1238660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 1238661 . G . PASS END=1238661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 1239466 . C . PASS END=1239523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,117,1755:0,120,255:40,0 chr1 1240062 . C . PASS END=1240090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,815:0,62,255:26,0 chr1 1240091 . G . PASS END=1240091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 1240092 . A . PASS END=1240108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr1 1242717 . C . PASS END=1242744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:13,0 chr1 1242745 . C . PASS END=1242763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:12,0 chr1 1243149 . C . LowGQ END=1243149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 1243150 . T . PASS END=1243181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr1 1243182 . A . PASS END=1243188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 1243189 . C . PASS END=1243190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 1243191 . G . PASS END=1243194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:7,0 chr1 1243195 . T . PASS END=1243195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 1244024 . A . PASS END=1244024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 1244025 . T . PASS END=1244025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 1244026 . G . PASS END=1244038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 1244039 . G . PASS END=1244048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:13,0 chr1 1244049 . C . PASS END=1244049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 1244050 . C . PASS END=1244050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1244051 . G . PASS END=1244063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:16,0 chr1 1244064 . A . PASS END=1244065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:15,0 chr1 1244066 . C . PASS END=1244066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1244067 . T . PASS END=1244067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:15,0 chr1 1244068 . T . PASS END=1244075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,592:0,51,255:17,0 chr1 1244076 . T . PASS END=1244077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 1244078 . C . PASS END=1244078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 1244079 . A . PASS END=1244079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 1244080 . G . PASS END=1244080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr1 1244081 . T . PASS END=1244084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1244085 . T . PASS END=1244085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1244086 . G . PASS END=1244090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1244091 . C . PASS END=1244100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,519:0,34,255:14,0 chr1 1244295 . C . PASS END=1244310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:33,0 chr1 1244311 . A . PASS END=1244311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:31,0 chr1 1244312 . G . PASS END=1244338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1187:0,83,255:33,0 chr1 1244339 . A . PASS END=1244339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1084:0,66,255:28,0 chr1 1244340 . G . PASS END=1244352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1169:0,80,255:30,0 chr1 1244466 . G . PASS END=1244485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,537:0,41,255:17,0 chr1 1244486 . T . PASS END=1244486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1244487 . T . PASS END=1244496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:19,0 chr1 1244497 . C . PASS END=1244507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 1244508 . A . PASS END=1244515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1244516 . C . PASS END=1244542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 1244543 . C . PASS END=1244551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:22:0,50,765:0,50,255:19,0 chr1 1244552 . C . PASS END=1244555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:20,0 chr1 1244556 . G . PASS END=1244594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,607:0,41,255:19,0 chr1 1244595 . T . PASS END=1244595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 1244596 . T . PASS END=1244601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 1244602 . C . PASS END=1244602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 1244603 . C . PASS END=1244605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1244606 . G . PASS END=1244606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 1244607 . G . PASS END=1244627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,605:0,51,255:18,0 chr1 1244628 . A . PASS END=1244628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 1244629 . C . PASS END=1244643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 1244644 . C . PASS END=1244644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 1244645 . G . PASS END=1244653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 1244834 . G . PASS END=1244834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1244835 . G . PASS END=1244836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1244837 . C . PASS END=1244837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1244838 . C . PASS END=1244870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr1 1244871 . G . PASS END=1244871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 1244872 . C . PASS END=1244886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1109:0,90,255:30,0 chr1 1244887 . C . PASS END=1244887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr1 1244888 . G . PASS END=1244901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1147:0,80,255:31,0 chr1 1244902 . T . PASS END=1244902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:26,0 chr1 1244903 . G . PASS END=1244906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 1244907 . C . PASS END=1244909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:28,0 chr1 1244910 . C . PASS END=1244912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:29,0 chr1 1244913 . G . PASS END=1244913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 1244914 . C . PASS END=1244916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 1244917 . C . PASS END=1244917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 1244918 . T . PASS END=1244931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1013:0,84,255:29,0 chr1 1244932 . G . PASS END=1244932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 1244933 . T . PASS END=1244936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 1244937 . G . PASS END=1244937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 1244938 . A . PASS END=1244939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 1244940 . C . PASS END=1244940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 1244941 . T . PASS END=1244943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1244944 . C . PASS END=1244961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:25,0 chr1 1244962 . T . PASS END=1244962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:18,0 chr1 1244963 . A . PASS END=1244966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:23,0 chr1 1244967 . T . PASS END=1244969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,62,255:19,0 chr1 1244970 . A . PASS END=1244970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:19,0 chr1 1244971 . C . PASS END=1244971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 1244972 . T . PASS END=1244972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1244973 . C . PASS END=1244973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 1244974 . T . PASS END=1244974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1244975 . C . PASS END=1244979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 1244980 . C . PASS END=1244983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 1245061 . C . PASS END=1245071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 1245072 . T . PASS END=1245072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:16,0 chr1 1245073 . G . PASS END=1245082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 1245083 . C . PASS END=1245086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 1245087 . A . PASS END=1245087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 1245088 . A . PASS END=1245104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:24,0 chr1 1245105 . T . PASS END=1245105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 1245106 . C . PASS END=1245112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 1245113 . C . PASS END=1245113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr1 1245114 . A . PASS END=1245118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 1245119 . T . PASS END=1245119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:21,0 chr1 1245120 . T . PASS END=1245133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 1245134 . T . PASS END=1245134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:22,0 chr1 1245135 . C . PASS END=1245137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1245138 . C . PASS END=1245138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 1245139 . T . PASS END=1245158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,870:0,72,255:25,0 chr1 1245159 . C . PASS END=1245159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 1245160 . C . PASS END=1245203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,752:0,63,255:23,0 chr1 1245204 . G . PASS END=1245222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 1245223 . G . PASS END=1245231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:14:0,31,495:0,31,255:13,0 chr1 1246014 . G . PASS END=1246030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1189:0,88,255:35,0 chr1 1246031 . A . PASS END=1246031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:32,0 chr1 1246032 . C . PASS END=1246038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1282:0,105,255:35,0 chr1 1246039 . T . PASS END=1246039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1029:0,74,255:33,0 chr1 1246040 . T . PASS END=1246041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1250:0,91,255:35,0 chr1 1246042 . G . PASS END=1246042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 1246043 . A . PASS END=1246043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1263:0,53,255:32,0 chr1 1246044 . G . PASS END=1246066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:34:0,80,1244:0,80,255:35,0 chr1 1246067 . A . PASS END=1246067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:29,0 chr1 1246068 . G . PASS END=1246068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:31,0 chr1 1246168 . G . PASS END=1246180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,112,1800:0,112,255:40,0 chr1 1246220 . G . PASS END=1246249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:82:49:0,82,1695:0,82,255:40,0 chr1 1246274 . G . PASS END=1246299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:36:0,87,1305:0,92,255:40,0 chr1 1246300 . G . PASS END=1246301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,92,255:26,0 chr1 1246302 . C . PASS END=1246304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 1246305 . C . PASS END=1246323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,908:0,61,255:26,0 chr1 1246324 . G . PASS END=1246325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 1246326 . T . PASS END=1246326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 1246327 . G . PASS END=1246328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 1246329 . G . PASS END=1246329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 1246330 . G . PASS END=1246333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 1246334 . T . PASS END=1246334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:28,0 chr1 1246335 . T . PASS END=1246341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 1246342 . T . PASS END=1246342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 1246343 . G . PASS END=1246344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1246345 . C . PASS END=1246347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 1246348 . G . PASS END=1246355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1246356 . C . PASS END=1246357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 1246358 . A . PASS END=1246367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1246368 . G . PASS END=1246368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 1246369 . C . PASS END=1246370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1246371 . A . PASS END=1246380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 1246381 . G . PASS END=1246391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:30,0 chr1 1246392 . A . PASS END=1246392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 1246393 . G . PASS END=1246400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:31,0 chr1 1246401 . T . PASS END=1246412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,71,255:25,0 chr1 1246413 . A . PASS END=1246415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,59,255:19,0 chr1 1246416 . G . PASS END=1246416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1246417 . C . PASS END=1246417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:19,0 chr1 1246418 . T . PASS END=1246418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1246419 . T . PASS END=1246429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr1 1246430 . T . PASS END=1246430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 1246431 . C . PASS END=1246443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 1246444 . G . PASS END=1246444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 1246445 . A . PASS END=1246449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1246450 . C . PASS END=1246450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:14,0 chr1 1246451 . G . PASS END=1246451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1246710 . G . PASS END=1246710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 1246711 . T . PASS END=1246711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:35,0 chr1 1246712 . G . PASS END=1246846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1119:0,90,255:40,0 chr1 1246847 . A . PASS END=1246847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 1246848 . G . PASS END=1246887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1133:0,80,255:38,0 chr1 1246888 . T . PASS END=1246888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1318:0,67,255:33,0 chr1 1246889 . C . PASS END=1246912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1295:0,92,255:36,0 chr1 1246913 . T . PASS END=1246913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1284:0,78,255:35,0 chr1 1246914 . G . PASS END=1247006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1170:0,83,255:37,0 chr1 1247007 . G . PASS END=1247016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:23,0 chr1 1247017 . A . PASS END=1247024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 1247025 . C . PASS END=1247030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 1247031 . C . PASS END=1247031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 1247032 . C . PASS END=1247038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr1 1247039 . A . PASS END=1247040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 1247239 . T . PASS END=1247239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:25,0 chr1 1247240 . C . PASS END=1247240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1247241 . A . PASS END=1247241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 1247242 . G . PASS END=1247242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1247243 . C . PASS END=1247244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:26,0 chr1 1247245 . G . PASS END=1247249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 1247250 . C . PASS END=1247252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,945:0,65,255:26,0 chr1 1247253 . G . PASS END=1247257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1247258 . A . PASS END=1247258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 1247259 . G . PASS END=1247260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 1247261 . C . PASS END=1247261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 1247262 . C . PASS END=1247264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 1247265 . T . PASS END=1247266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,978:0,70,255:29,0 chr1 1247267 . T . PASS END=1247267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 1247268 . T . PASS END=1247268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 1247269 . C . PASS END=1247269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 1247270 . A . PASS END=1247270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 1247271 . G . PASS END=1247274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 1247275 . A . PASS END=1247275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 1247276 . G . PASS END=1247276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1241:0,96,255:32,0 chr1 1247277 . A . PASS END=1247277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 1247278 . T . PASS END=1247304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1180:0,80,255:33,0 chr1 1247398 . C . PASS END=1247401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 1247402 . T . PASS END=1247402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1247403 . A . PASS END=1247425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,659:0,51,255:18,0 chr1 1247426 . T . PASS END=1247426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr1 1247427 . T . PASS END=1247456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 1247457 . C . PASS END=1247463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 1247464 . G . PASS END=1247464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 1247465 . A . PASS END=1247472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1247473 . C . PASS END=1247483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 1247484 . C . PASS END=1247489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1247490 . C . PASS END=1247493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1247494 . T C, 47.48 PASS DP=15;MQ=241.54;MQRankSum=2.933;ReadPosRankSum=2.133;FractionInformativeReads=0.933;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,5,0:0.357,0.000:14:2,4,0:7,1,0:46:82,0,50,179,322,500:152,0,255:8,0:4.7484e+01,9.9144e-05,5.3000e+01,1.7875e+02,3.5639e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,2,3:7,2,1,4 chr1 1247495 . G . PASS END=1247499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 1247500 . G . PASS END=1247512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:9:0,27,327:0,27,255:9,0 chr1 1247513 . T . PASS END=1247516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 1247517 . C . LowGQ END=1247519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:10:0,0,310:6,0,255:10,0 chr1 1247520 . T . PASS END=1247520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 1247521 . C . LowGQ END=1247522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:0,0,255:10,0 chr1 1247523 . G . PASS END=1247524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 1247525 . A . PASS END=1247526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 1247527 . G . PASS END=1247527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1247606 . C . PASS END=1247613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,546:0,40,255:19,0 chr1 1247614 . G . PASS END=1247629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:24,0 chr1 1247630 . A . PASS END=1247630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 1247631 . A . PASS END=1247644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 1247645 . T . PASS END=1247645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1247646 . C . PASS END=1247647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 1247648 . T . PASS END=1247648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 1247649 . T . PASS END=1247665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr1 1247666 . T . PASS END=1247674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr1 1247675 . C . PASS END=1247676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1247677 . G . PASS END=1247677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1247678 . G . PASS END=1247678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1247679 . T . PASS END=1247680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1247681 . A . PASS END=1247681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr1 1247682 . A . PASS END=1247690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 1247691 . G . PASS END=1247691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 1247692 . G . PASS END=1247712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 1247713 . T . PASS END=1247713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 1247714 . T . PASS END=1247728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:23,0 chr1 1247729 . G . PASS END=1247729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr1 1247730 . A . PASS END=1247735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 1247736 . C . PASS END=1247748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1247820 . G . PASS END=1247822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1247823 . G . PASS END=1247826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 1247827 . T . PASS END=1247827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 1247828 . T . PASS END=1247838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 1247839 . G . PASS END=1247873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,336:0,30,255:12,0 chr1 1247874 . G . PASS END=1247874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 1247875 . A . PASS END=1247876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 1247877 . C . PASS END=1247878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 1247879 . G . PASS END=1247879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 1247880 . C . PASS END=1247881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 1247973 . C . PASS END=1248022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 1248023 . C . PASS END=1248028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 1248029 . C . LowGQ END=1248029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 1248030 . T . PASS END=1248038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,327:0,27,255:9,0 chr1 1248039 . G . PASS END=1248080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:12,0 chr1 1248167 . G . PASS END=1248168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 1248169 . A . PASS END=1248187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 1248188 . G . PASS END=1248196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,545:0,45,255:16,0 chr1 1248197 . A . PASS END=1248197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 1248198 . C . PASS END=1248232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 1248233 . C . PASS END=1248234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 1248235 . C . PASS END=1248246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:16,0 chr1 1248247 . G . PASS END=1248247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 1248248 . C . PASS END=1248266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 1248267 . G . PASS END=1248267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 1248268 . A . PASS END=1248276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 1248277 . G . PASS END=1248280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1248281 . C . PASS END=1248283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1248284 . C . PASS END=1248284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1248285 . G . PASS END=1248285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 1248286 . T . PASS END=1248288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1248289 . G . PASS END=1248290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 1248291 . G . PASS END=1248296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 1248297 . T . PASS END=1248297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 1248298 . G . PASS END=1248314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,919:0,69,255:26,0 chr1 1248315 . C . PASS END=1248324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:27,0 chr1 1248325 . T . PASS END=1248329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 1248415 . C . PASS END=1248416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 1248417 . C . PASS END=1248417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1374:0,68,255:38,0 chr1 1248418 . C . PASS END=1248481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:36:0,82,1260:0,82,255:40,0 chr1 1248482 . A . PASS END=1248504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:26,0 chr1 1248889 . C . PASS END=1248972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:97:37:0,97,1184:0,97,255:40,0 chr1 1249112 . C . PASS END=1249149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,114,1755:0,114,255:40,0 chr1 1249150 . C . PASS END=1249186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,150,255:40,0 chr1 1249187 . G A, 43.16 PASS DP=64;MQ=250.00;MQRankSum=6.590;ReadPosRankSum=4.505;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,23,0:0.359,0.000:64:15,15,0:26,8,0:43:78,0,50,815,1435,2250:255,0,255:40,0:4.3161e+01,2.3143e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,21,15,8:22,19,15,8 chr1 1249188 . A . PASS END=1249224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,164,255:40,0 chr1 1249225 . A . PASS END=1249301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:37:0,87,1305:0,101,255:40,0 chr1 1249681 . C . PASS END=1249745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:19,0 chr1 1250204 . C . PASS END=1250208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 1250209 . C . PASS END=1250209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 1250210 . A . PASS END=1250211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,325:0,27,255:9,0 chr1 1250212 . C . PASS END=1250212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 1250213 . A . PASS END=1250224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,317:0,27,255:9,0 chr1 1250225 . C . PASS END=1250228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 1250229 . T . PASS END=1250232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 1250233 . C . PASS END=1250233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,419:0,3,255:13,0 chr1 1250234 . T . PASS END=1250234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1250235 . T . PASS END=1250235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 1250236 . T . PASS END=1250239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr1 1250240 . C . PASS END=1250240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 1250241 . A . PASS END=1250261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,574:0,40,255:19,0 chr1 1250262 . C . PASS END=1250263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 1250264 . C . PASS END=1250264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 1250265 . T . PASS END=1250271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr1 1250272 . C . PASS END=1250272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 1250273 . A . PASS END=1250275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,695:0,63,255:22,0 chr1 1250276 . G . PASS END=1250276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 1250277 . A . PASS END=1250293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,807:0,66,255:24,0 chr1 1250294 . G . PASS END=1250294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 1250295 . G . PASS END=1250303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 1250304 . A . PASS END=1250304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1250305 . T . PASS END=1250319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 1250320 . G . PASS END=1250320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 1250321 . G . PASS END=1250322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1250323 . A . PASS END=1250335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:19:0,49,737:0,49,255:19,0 chr1 1250336 . G . PASS END=1250336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 1250337 . G . PASS END=1250342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 1250784 . C . PASS END=1250797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1235:0,99,255:33,0 chr1 1250798 . T . PASS END=1250798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:29,0 chr1 1250799 . G . PASS END=1250804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 1250805 . A . PASS END=1250809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 1250810 . A . PASS END=1250818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1072:0,83,255:29,0 chr1 1250900 . C . PASS END=1250900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 1250901 . G . PASS END=1250915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1169:0,80,255:30,0 chr1 1250916 . T . PASS END=1250916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:28,0 chr1 1250917 . C . PASS END=1250924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1250925 . A . PASS END=1250925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,950:0,56,255:26,0 chr1 1250926 . C . PASS END=1250927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 1250928 . T . PASS END=1250944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 1250945 . T . PASS END=1250945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 1250946 . G . PASS END=1250946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1250947 . C . PASS END=1250981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:26:0,71,1053:0,71,255:26,0 chr1 1250982 . T . PASS END=1250982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 1250983 . C . PASS END=1250984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 1250985 . A . PASS END=1250985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 1250986 . G . PASS END=1250990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 1250991 . T . PASS END=1250991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 1250992 . C . PASS END=1250998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 1254235 . T . PASS END=1254239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:13,0 chr1 1254240 . C . PASS END=1254246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 1254247 . T . PASS END=1254247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 1254248 . C . PASS END=1254250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:18,0 chr1 1254251 . C . PASS END=1254254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 1254255 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=-0.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:6,8,0:5,5,0:48:85,0,50,463,393,856:255,0,255:10,0:5.0000e+01,6.7045e-05,5.2641e+01,4.5000e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,9,4:4,7,10,3 chr1 1254256 . A . PASS END=1254263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 1254264 . C . PASS END=1254264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 1254265 . C . PASS END=1254278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 1254279 . C . PASS END=1254283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 1254284 . G . PASS END=1254284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 1254285 . A . PASS END=1254292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,944:0,84,255:29,0 chr1 1254293 . C . PASS END=1254305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 1254306 . G . PASS END=1254314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1254315 . T . PASS END=1254316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1254317 . C . PASS END=1254339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 1254340 . C . PASS END=1254341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 1254342 . C . PASS END=1254344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1254345 . G . PASS END=1254346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1254347 . G . PASS END=1254348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1254349 . G . PASS END=1254350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1254351 . C . PASS END=1254368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,71,255:26,0 chr1 1254369 . C . PASS END=1254369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 1254370 . T . PASS END=1254387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 1254388 . T . PASS END=1254394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 1254395 . C . PASS END=1254395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:15,0 chr1 1254396 . T . PASS END=1254396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 1254397 . G . PASS END=1254405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 1254406 . A . PASS END=1254406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr1 1254407 . A . PASS END=1254430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:23,0 chr1 1254431 . G . PASS END=1254431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 1254432 . G . PASS END=1254435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1254436 . A G, 48.41 PASS DP=22;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=1.269;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,9,0:0.409,0.000:22:5,4,0:8,5,0:47:83,0,50,322,465,787:255,0,255:13,0:4.8412e+01,8.4389e-05,5.3000e+01,3.2190e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,5,4:5,8,6,3:1254436 chr1 1254437 . T . PASS END=1254442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1254443 . G A, 46.24 PASS DP=21;MQ=250.00;MQRankSum=3.566;ReadPosRankSum=2.219;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,7,0:0.350,0.000:20:5,4,0:8,3,0:45:81,0,50,250,436,686:225,0,255:12,0:4.6236e+01,1.2503e-04,5.3000e+01,2.5037e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,6,1:6,7,5,2:1254436 chr1 1254444 . G . PASS END=1254444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1254445 . T . PASS END=1254482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,50,255:19,0 chr1 1254483 . G . PASS END=1254498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 1254499 . G . PASS END=1254508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 1254509 . C . PASS END=1254517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1254518 . A . PASS END=1254518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 1254519 . C . PASS END=1254519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1254520 . G . PASS END=1254532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 1254533 . C . PASS END=1254533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1254534 . C . PASS END=1254541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 1254542 . C . PASS END=1254546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1254547 . C . PASS END=1254549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1254550 . A . PASS END=1254560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 1254561 . G . PASS END=1254604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:19,0 chr1 1254605 . G . PASS END=1254618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr1 1254619 . C . PASS END=1254619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 1254620 . A . PASS END=1254622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,756:0,66,255:25,0 chr1 1254623 . G . PASS END=1254624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 1254625 . T . PASS END=1254626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 1254627 . G . PASS END=1254630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1254631 . G . PASS END=1254631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 1254632 . G . PASS END=1254632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 1254633 . G . PASS END=1254633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 1254634 . G . PASS END=1254652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 1254653 . A . PASS END=1254653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 1254654 . G . PASS END=1254665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,968:0,87,255:29,0 chr1 1254666 . G . PASS END=1254714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,937:0,62,255:26,0 chr1 1254715 . C . PASS END=1254715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1254716 . A . PASS END=1254717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1254718 . G . PASS END=1254718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1254719 . C . PASS END=1254724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,998:0,68,255:26,0 chr1 1254725 . T . PASS END=1254729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 1254730 . C . PASS END=1254730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 1254731 . A . PASS END=1254731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 1254732 . T . PASS END=1254733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 1254734 . T . PASS END=1254734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 1254735 . G . PASS END=1254735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 1254736 . G . PASS END=1254736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:27,0 chr1 1254737 . G . PASS END=1254739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1254740 . G . PASS END=1254740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 1254741 . T . PASS END=1254741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 1254742 . G . PASS END=1254745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1254746 . A . PASS END=1254747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:27,0 chr1 1254748 . G . PASS END=1254748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1254749 . T . PASS END=1254749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:27,0 chr1 1254750 . T . PASS END=1254750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 1254751 . G . PASS END=1254755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 1254756 . C . PASS END=1254756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 1254757 . G . PASS END=1254759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1254760 . C . PASS END=1254766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 1254767 . T . PASS END=1254767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:20,0 chr1 1254768 . C . PASS END=1254774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 1254775 . G . PASS END=1254775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 1254776 . A . PASS END=1254776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1254777 . T . PASS END=1254777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 1254778 . C . PASS END=1254785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 1254786 . A . PASS END=1254786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 1254787 . G . PASS END=1254792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1254793 . C . PASS END=1254793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 1254794 . A . PASS END=1254794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1254795 . G . PASS END=1254795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 1254796 . C . PASS END=1254803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:22,0 chr1 1254804 . G . PASS END=1254809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,776:0,66,255:22,0 chr1 1254810 . T . PASS END=1254810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 1254811 . G . PASS END=1254813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1254814 . C . PASS END=1254824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,59,255:19,0 chr1 1254825 . G . PASS END=1254830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1254831 . T . PASS END=1254833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1254834 . A . PASS END=1254837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1254838 . G . PASS END=1254840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1254841 . C G, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.464;ReadPosRankSum=2.686;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,15,0:0.714,0.000:21:2,10,0:4,5,0:43:85,0,41,532,215,747:255,0,166:6,0:5.0000e+01,2.0295e-04,4.4347e+01,4.5000e+02,2.4945e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,7,8:1,5,10,5 chr1 1254842 . C . PASS END=1254842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1254843 . C . PASS END=1254843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 1254844 . G . PASS END=1254873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 1254874 . G . PASS END=1254878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 1254879 . C . PASS END=1254904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 1255836 . C . PASS END=1255902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,104,1419:0,104,255:40,0 chr1 1255903 . A . PASS END=1255903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1784:0,76,255:40,0 chr1 1255904 . G . PASS END=1255909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,134,255:40,0 chr1 1256018 . T . PASS END=1256062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1412:0,101,255:40,0 chr1 1256376 . G . PASS END=1256382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr1 1256383 . T . PASS END=1256383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:29,0 chr1 1256384 . T . PASS END=1256397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1233:0,86,255:34,0 chr1 1256398 . A . PASS END=1256398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:29,0 chr1 1256399 . T . PASS END=1256416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1282:0,105,255:35,0 chr1 1256417 . C . PASS END=1256417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 1256418 . A . PASS END=1256457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1175:0,96,255:36,0 chr1 1256458 . A . PASS END=1256469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,81,255:26,0 chr1 1256470 . G . PASS END=1256476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:24,0 chr1 1257288 . C . PASS END=1257294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,99,1800:0,99,255:40,0 chr1 1257295 . T . PASS END=1257295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,9:61:33:61:0,33,1479:0,33,255:40,0 chr1 1257296 . G . PASS END=1257360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:86:58:0,86,1709:0,86,255:40,0 chr1 1257361 . C . PASS END=1257361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:74:57:0,74,1808:0,74,255:40,0 chr1 1257362 . T . PASS END=1257364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr1 1258507 . T . PASS END=1258524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 1258525 . A . PASS END=1258526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,582:0,34,255:16,0 chr1 1258527 . C . PASS END=1258529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 1258530 . G . PASS END=1258530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 1258531 . G . PASS END=1258531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 1258532 . C . PASS END=1258532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 1258533 . G . PASS END=1258534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 1258535 . G . PASS END=1258535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1258536 . G . PASS END=1258537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 1258538 . G . PASS END=1258538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1258539 . C . PASS END=1258543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr1 1258544 . T . PASS END=1258544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 1258545 . C . PASS END=1258559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:19,0 chr1 1258560 . C . PASS END=1258560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1258561 . G . PASS END=1258561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 1258562 . C . PASS END=1258566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1258567 . G . PASS END=1258571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 1258572 . G . PASS END=1258572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1258573 . G . PASS END=1258584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:20,0 chr1 1258585 . C . PASS END=1258589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 1258590 . T . PASS END=1258590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 1258591 . G . PASS END=1258629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:23,0 chr1 1258630 . T . PASS END=1258630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1258631 . G . PASS END=1258634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 1258635 . G . PASS END=1258635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 1258636 . G . PASS END=1258644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 1258645 . C . PASS END=1258654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,69,255:17,0 chr1 1258655 . A . PASS END=1258657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:20:0,39,585:0,60,255:13,0 chr1 1258658 . G . PASS END=1258667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr1 1259961 . C . PASS END=1259962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1259963 . A . PASS END=1259963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:20,0 chr1 1259964 . A . PASS END=1259964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 1259965 . G . PASS END=1259990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr1 1259991 . T . PASS END=1259991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:19,0 chr1 1259992 . C . PASS END=1259993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:21,0 chr1 1262291 . A . PASS END=1262412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1177:0,80,255:40,0 chr1 1262621 . G . PASS END=1262628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1262629 . A . PASS END=1262630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1262631 . A . PASS END=1262631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1262632 . G . PASS END=1262635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1262636 . G . PASS END=1262636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 1262637 . G . PASS END=1262642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr1 1262643 . A . PASS END=1262648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1262649 . T . PASS END=1262668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 1262669 . G . PASS END=1262685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 1262686 . T . PASS END=1262686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 1262687 . C . PASS END=1262695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,472:0,39,255:13,0 chr1 1262696 . C . PASS END=1262707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr1 1262708 . C . PASS END=1262708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 1262709 . C . PASS END=1262717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,721:0,57,255:19,0 chr1 1262718 . G . PASS END=1262718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1262719 . A . PASS END=1262726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr1 1262727 . C . PASS END=1262729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1262730 . A . PASS END=1262731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,737:0,49,255:19,0 chr1 1262732 . C . PASS END=1262770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 1262771 . G . PASS END=1262771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1262772 . G . PASS END=1262796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,837:0,69,255:23,0 chr1 1262797 . A . PASS END=1262797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr1 1262798 . C . PASS END=1262804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 1262805 . T . PASS END=1262805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 1262806 . C . PASS END=1262806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 1262807 . T . PASS END=1262810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1262811 . T . PASS END=1262811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 1262812 . G . PASS END=1262880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,840:0,61,255:26,0 chr1 1262881 . G . PASS END=1262893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 1262894 . A . PASS END=1262896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1262897 . C . PASS END=1262897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1262898 . A . PASS END=1262898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 1262899 . C . PASS END=1262928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 1262929 . C . PASS END=1262957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1080:0,87,255:31,0 chr1 1262958 . G . PASS END=1262958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 1262959 . T . PASS END=1262964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 1262965 . G . PASS END=1262965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1262966 . C T, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=2.557;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,16,0:0.533,0.000:30:7,9,0:7,7,0:48:85,0,50,535,500,1036:255,0,255:13,0:5.0000e+01,6.6527e-05,5.2766e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,12,4:7,7,11,5 chr1 1262967 . G . PASS END=1262967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1262968 . C . PASS END=1262970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1262971 . T . PASS END=1262972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1262973 . A . PASS END=1262973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1262974 . C . PASS END=1262974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:26,0 chr1 1262975 . C . PASS END=1263003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 1263004 . A . PASS END=1263006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 1263007 . T . PASS END=1263033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,690:0,46,255:20,0 chr1 1263034 . C . PASS END=1263050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1263051 . C . PASS END=1263053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 1263054 . A . PASS END=1263054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1263055 . T . PASS END=1263067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 1263068 . C . PASS END=1263074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 1263075 . T . PASS END=1263075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1263076 . T . PASS END=1263082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1263083 . G . PASS END=1263106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 1263107 . G . PASS END=1263122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 1263123 . T . PASS END=1263141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 1263142 . A . LowGQ END=1263142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 1263143 . G . PASS END=1263143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 1266726 . A . PASS END=1266727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1266728 . G . PASS END=1266754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,405:0,33,255:13,0 chr1 1266755 . C . PASS END=1266761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1266762 . G . PASS END=1266764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1266765 . C . PASS END=1266780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 1266781 . C . PASS END=1266781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 1266782 . G . PASS END=1266818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 1266819 . A . PASS END=1266819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 1266820 . A . PASS END=1266877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,576:0,51,255:18,0 chr1 1266878 . C . PASS END=1266878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1266879 . C . PASS END=1266880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 1266881 . C . PASS END=1266881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1266882 . A . PASS END=1266887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 1266888 . A . PASS END=1266899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,38,255:12,0 chr1 1266900 . A . PASS END=1266900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:12,0 chr1 1266901 . G . PASS END=1266904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 1266905 . T . PASS END=1266905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1266906 . G . PASS END=1266913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 1266914 . C . PASS END=1266915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:8,0 chr1 1266916 . G . PASS END=1266916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 1267018 . G . PASS END=1267022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 1267023 . C . PASS END=1267027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 1267028 . A . PASS END=1267032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:17,0 chr1 1267033 . C . PASS END=1267033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 1267034 . C . PASS END=1267041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:21:0,42,630:0,63,255:17,0 chr1 1267042 . G . PASS END=1267056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:30:25:0,30,450:0,75,255:13,0 chr1 1267057 . A . PASS END=1267073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:24:22:0,24,360:0,49,255:9,0 chr1 1267074 . TCAA T, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=0.102;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,14,0:0.636,0.000:22:4,7,0:4,7,0:47:79,0,46,526,265,791:255,0,228:8,21:5.0000e+01,9.3449e-05,4.9394e+01,4.5000e+02,3.0015e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:6,2,7,7:4,4,6,8 chr1 1267075 . C . LowGQ END=1267078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,23:30:0:22:0,0,0:255,0,159:22,21 chr1 1267079 . A . PASS END=1267095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:26,0 chr1 1267096 . G . PASS END=1267096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1267097 . C . PASS END=1267099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1267100 . G . PASS END=1267109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1267110 . T . PASS END=1267112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 1267113 . G . PASS END=1267115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 1267116 . A . PASS END=1267116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1037:0,60,255:26,0 chr1 1267117 . C . PASS END=1267124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:29,0 chr1 1267125 . T . PASS END=1267125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:28,0 chr1 1267126 . T . PASS END=1267148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1057:0,87,255:30,0 chr1 1267149 . T . PASS END=1267149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 1267150 . G . PASS END=1267150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1267151 . G . PASS END=1267156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1267157 . A . PASS END=1267160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 1267161 . C . PASS END=1267194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,939:0,62,255:26,0 chr1 1267195 . C . PASS END=1267203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 1267204 . C . PASS END=1267204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 1267205 . G . PASS END=1267205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1267206 . C . PASS END=1267214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 1267215 . A . PASS END=1267221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 1267222 . G . PASS END=1267232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,73,255:25,0 chr1 1267233 . C . PASS END=1267237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,855:0,54,255:21,0 chr1 1267238 . G . PASS END=1267240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1267241 . C . PASS END=1267244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1267245 . C . PASS END=1267250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1267251 . T . PASS END=1267257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1267258 . C . PASS END=1267258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1267259 . C . PASS END=1267260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1267261 . C . PASS END=1267269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1267270 . G . PASS END=1267270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 1267271 . C . PASS END=1267272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1267273 . C . PASS END=1267282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 1267283 . A . PASS END=1267292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,675:0,44,255:16,0 chr1 1267293 . T . PASS END=1267318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:19:0,30,450:0,41,255:13,0 chr1 1267404 . G . PASS END=1267407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr1 1267408 . G . PASS END=1267408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 1267409 . C . PASS END=1267418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 1267419 . A . PASS END=1267427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:25,0 chr1 1267428 . C . PASS END=1267428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 1267429 . T . PASS END=1267429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 1267430 . G . PASS END=1267430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 1267431 . C . PASS END=1267454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,937:0,75,255:26,0 chr1 1267455 . T . PASS END=1267455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 1267456 . C . PASS END=1267460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:26,0 chr1 1267461 . T . PASS END=1267461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr1 1267462 . T . PASS END=1267469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1016:0,71,255:26,0 chr1 1267470 . G . PASS END=1267470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1267471 . T . PASS END=1267477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 1267478 . C . PASS END=1267485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1267486 . T . PASS END=1267509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:26,0 chr1 1267510 . T . PASS END=1267516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 1267517 . G . PASS END=1267521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,954:0,67,255:26,0 chr1 1267522 . T . PASS END=1267523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1267524 . G . PASS END=1267525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1267526 . C . PASS END=1267553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,65,255:26,0 chr1 1267554 . G . PASS END=1267554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1267555 . A . PASS END=1267555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1267556 . C . PASS END=1267558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 1267559 . C G, 49.15 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=1.643;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,10,0:0.435,0.000:23:12,4,0:1,6,0:48:84,0,50,358,456,814:255,0,255:11,0:4.9146e+01,7.4552e-05,5.3000e+01,3.5771e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,10,4,6:4,9,8,2 chr1 1267560 . G . PASS END=1267596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,540:0,41,255:19,0 chr1 1267597 . T . PASS END=1267609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 1267610 . C . PASS END=1267613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 1267614 . A . PASS END=1267614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 1267615 . T . PASS END=1267615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1267616 . C . PASS END=1267617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 1267618 . G . PASS END=1267628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:11:0,22,360:0,22,255:9,0 chr1 1267629 . G . PASS END=1267653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 1267654 . C . PASS END=1267654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 1267655 . C . PASS END=1267655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1267656 . G . PASS END=1267656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 1267657 . A . PASS END=1267659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1267660 . A . PASS END=1267660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 1267661 . C . PASS END=1267678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,329:0,33,255:12,0 chr1 1267679 . G . PASS END=1267679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 1267680 . C . LowGQ END=1267681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,4:11:0:11:0,0,139:33,0,172:7,0 chr1 1267682 . G . PASS END=1267683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:11,0 chr1 1267684 . A . PASS END=1267684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,215:0,2,215:10,0 chr1 1267685 . C . PASS END=1267685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:32:11:0,32,248:0,32,248:11,0 chr1 1267686 . G . LowGQ END=1267687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,197:1,0,197:9,0 chr1 1267688 . C . PASS END=1267688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,288:0,16,255:10,0 chr1 1267689 . C . LowGQ END=1267690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,160:0,0,161:9,0 chr1 1267691 . G . PASS END=1267692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:16:11:0,16,252:0,16,252:10,0 chr1 1267693 . A . PASS END=1267694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,288:0,3,255:9,0 chr1 1267695 . C . PASS END=1267695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1267696 . A . LowGQ END=1267699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,249:0,0,255:11,0 chr1 1267700 . G . PASS END=1267700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1267701 . A . LowGQ END=1267701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,269:14,0,255:8,0 chr1 1267702 . A . PASS END=1267702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1267703 . C . LowGQ END=1267703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,300:11,0,255:9,0 chr1 1267704 . C . PASS END=1267704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 1267705 . A . PASS END=1267705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 1267706 . G . LowGQ END=1267706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,5:12:0:12:0,0,124:89,0,213:7,0 chr1 1267707 . A . PASS END=1267707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 1267708 . G . PASS END=1267708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,268:0,19,255:11,0 chr1 1267709 . C . PASS END=1267709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 1267710 . A . PASS END=1267710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1267711 . G . LowGQ END=1267711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,247:14,0,255:6,0 chr1 1267712 . C . PASS END=1267712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1267713 . G . PASS END=1267714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:16:11:0,16,304:0,16,255:8,0 chr1 1267715 . G . PASS END=1267715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1267716 . C . LowGQ END=1267718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:11:0,0,155:0,0,208:8,0 chr1 1267719 . G . PASS END=1267719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1267720 . T . PASS END=1267720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr1 1267721 . G . PASS END=1267724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 1267725 . C . LowGQ END=1267726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,169:26,0,211:7,0 chr1 1267727 . G . PASS END=1267727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 1267728 . C . LowGQ END=1267728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,210:3,0,214:7,0 chr1 1267729 . T . PASS END=1267729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 1267730 . G . PASS END=1267730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 1267731 . T . PASS END=1267732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 1267733 . C . LowGQ END=1267733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,4:10:0:10:0,0,130:51,0,181:5,0 chr1 1267734 . G . PASS END=1267734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 1267735 . C . LowGQ END=1267735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,200:20,0,219:6,0 chr1 1267736 . C . PASS END=1267737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:8,0 chr1 1267738 . C . PASS END=1267738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 1267739 . C . LowGQ END=1267740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:0,0,217:7,0 chr1 1267741 . T . PASS END=1267742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 1267743 . C . PASS END=1267748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 1267749 . G . PASS END=1267749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr1 1267750 . C . PASS END=1267753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1267754 . C . PASS END=1267754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 1267755 . G . LowGQ END=1267755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:20,0,236:6,0 chr1 1267756 . C . PASS END=1267758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1267759 . T . LowGQ END=1267759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,184:9,0,193:6,0 chr1 1267760 . C . PASS END=1267760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1267761 . T . LowGQ END=1267761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:7,0 chr1 1267762 . T . PASS END=1267766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1267767 . T . LowGQ END=1267767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,194:50,0,244:7,0 chr1 1267768 . A . PASS END=1267768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1267769 . C . PASS END=1267769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 1267770 . A . PASS END=1267770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1267771 . G . LowGQ END=1267771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:20,0,236:7,0 chr1 1267772 . C . PASS END=1267773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 1267774 . T . LowGQ END=1267774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr1 1267775 . C . PASS END=1267779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 1267780 . G A, 0.08 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=-0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:0,0,0:6,1,0:17:18,0,50,36,215,250:15,0,247:6,0:8.4457e-02,1.7155e+01,7.0155e+01,5.2913e+01,2.6650e+02,2.7049e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,0,1:5,1,1,0 chr1 1267781 . C . PASS END=1267817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 1267818 . T . PASS END=1267825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 1267826 . C . PASS END=1267846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr1 1267847 . G . PASS END=1267898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,559:0,41,255:17,0 chr1 1267899 . C . PASS END=1267910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 1267911 . T . PASS END=1267916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 1267917 . C . PASS END=1267921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1267922 . C . PASS END=1267923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1267924 . T . PASS END=1267927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1267928 . G . PASS END=1267929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr1 1267930 . C . PASS END=1267962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:13,0 chr1 1267963 . G . PASS END=1267990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:17,0 chr1 1267991 . T . PASS END=1267991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:14,0 chr1 1267992 . C . PASS END=1268029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr1 1268030 . T . PASS END=1268030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 1268031 . G . PASS END=1268091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:19,0 chr1 1268092 . A . PASS END=1268094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1268095 . C . PASS END=1268101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1268102 . G . PASS END=1268117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 1268118 . G . PASS END=1268121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 1268122 . T . PASS END=1268158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,660:0,54,255:19,0 chr1 1268159 . C T, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.325;ReadPosRankSum=2.857;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,12,0:0.667,0.000:18:6,7,0:0,5,0:46:85,0,46,400,215,615:255,0,179:5,0:5.0000e+01,1.0070e-04,4.8797e+01,4.0043e+02,2.4938e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,7,5:4,2,6,6 chr1 1268160 . G . PASS END=1268183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,651:0,51,255:19,0 chr1 1268184 . C . PASS END=1268184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 1268185 . A . PASS END=1268186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1268301 . C . PASS END=1268322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 1268323 . T . PASS END=1268323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 1268324 . G . PASS END=1268328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:26,0 chr1 1268329 . T . PASS END=1268349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:29,0 chr1 1268350 . T . PASS END=1268350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 1268351 . G . PASS END=1268363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr1 1268364 . A . PASS END=1268364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 1268365 . G . PASS END=1268367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1268368 . G . PASS END=1268371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 1268372 . C . PASS END=1268372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1268373 . G . PASS END=1268382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,77,255:26,0 chr1 1268383 . A . PASS END=1268385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 1268386 . A . PASS END=1268388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 1268389 . A . PASS END=1268390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1268391 . C . PASS END=1268395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 1268396 . G . PASS END=1268407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 1268408 . G . PASS END=1268482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,869:0,64,255:26,0 chr1 1268483 . C . PASS END=1268483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 1268484 . T . PASS END=1268493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 1268494 . C . PASS END=1268494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 1268495 . T . PASS END=1268502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 1268503 . A . PASS END=1268503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 1268504 . G . PASS END=1268504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1268639 . A . PASS END=1268652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,554:0,40,255:19,0 chr1 1268653 . G . PASS END=1268655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:22,0 chr1 1268656 . C . PASS END=1268656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,607:0,10,255:20,0 chr1 1268657 . T . PASS END=1268659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,686:0,27,255:21,0 chr1 1268660 . C . PASS END=1268661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 1268662 . G . PASS END=1268662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 1268663 . C . PASS END=1268664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,752:0,30,255:22,0 chr1 1268665 . G . PASS END=1268665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 1268666 . T . PASS END=1268666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:25,0 chr1 1268667 . G . PASS END=1268670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1268671 . G . PASS END=1268671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 1268672 . G . PASS END=1268674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1268675 . G . PASS END=1268677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1268678 . C . PASS END=1268678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:25,0 chr1 1268679 . A . PASS END=1268683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,925:0,67,255:26,0 chr1 1268684 . C . PASS END=1268705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1063:0,80,255:36,0 chr1 1268706 . C . PASS END=1268706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:34,0 chr1 1268707 . C . PASS END=1268774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1264:0,81,255:40,0 chr1 1268775 . G . PASS END=1268775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 1268776 . G . PASS END=1268778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1357:0,95,255:34,0 chr1 1268779 . G . PASS END=1268779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:33,0 chr1 1268780 . G . PASS END=1268809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1364:0,98,255:40,0 chr1 1268810 . C . PASS END=1268846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,102,1488:0,104,255:40,0 chr1 1268847 . T G, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,20,0:0,21,0:120:208,123,0,1581,123,1581:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,21:0,0,23,18 chr1 1268848 . A . PASS END=1268856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,97,255:35,0 chr1 1268857 . A . PASS END=1268857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1156:0,75,255:29,0 chr1 1268858 . C . PASS END=1268875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1188:0,83,255:31,0 chr1 1268876 . T . PASS END=1268876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1029:0,63,255:26,0 chr1 1268877 . C . PASS END=1268877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 1268878 . T . PASS END=1268878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:26,0 chr1 1268879 . C . PASS END=1268880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:28,0 chr1 1268881 . C . PASS END=1268881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 1268882 . A . PASS END=1268882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1268883 . C . PASS END=1268883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 1268884 . A . PASS END=1268884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1268885 . G . PASS END=1268903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1080:0,90,255:30,0 chr1 1268904 . T . PASS END=1268904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr1 1268905 . T . PASS END=1268905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1268906 . T . PASS END=1268906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 1268907 . G . PASS END=1268907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1268908 . T . PASS END=1268908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 1268909 . G . PASS END=1268911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 1268912 . C . PASS END=1268912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 1268913 . A . PASS END=1268913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1268914 . G . PASS END=1268914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 1268915 . G . PASS END=1268918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:34,0 chr1 1268919 . A . PASS END=1268919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:30,0 chr1 1268920 . G . PASS END=1268959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,89,255:33,0 chr1 1268960 . T . PASS END=1268960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,972:0,63,255:29,0 chr1 1268961 . C . PASS END=1268974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:31,0 chr1 1268975 . T . PASS END=1268989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr1 1268990 . G . PASS END=1268993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1268994 . T . PASS END=1269008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,951:0,65,255:27,0 chr1 1269009 . T . PASS END=1269009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:20,0 chr1 1269010 . G . PASS END=1269023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:24,0 chr1 1269024 . T . PASS END=1269026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 1269027 . G . PASS END=1269029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 1269030 . T . PASS END=1269030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 1269031 . T . PASS END=1269042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 1269043 . T . PASS END=1269043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 1269044 . T . PASS END=1269070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,717:0,63,255:22,0 chr1 1269071 . A . PASS END=1269072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:19,0 chr1 1269073 . C . PASS END=1269073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1269074 . C . PASS END=1269082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,767:0,50,255:19,0 chr1 1269083 . C . PASS END=1269083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 1269084 . A . PASS END=1269121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 1269122 . T . PASS END=1269122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 1269123 . G . PASS END=1269154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:18,0 chr1 1269155 . T . PASS END=1269163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 1269164 . C . PASS END=1269164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:12,0 chr1 1269165 . A . PASS END=1269165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 1269166 . G . PASS END=1269179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 1269180 . G . PASS END=1269180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1269181 . A . PASS END=1269182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1269183 . G . PASS END=1269183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 1269184 . C . PASS END=1269184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1269185 . C . PASS END=1269186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 1269187 . G . PASS END=1269187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr1 1269188 . G . PASS END=1269188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:16,0 chr1 1269189 . C . PASS END=1269189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 1269190 . C . PASS END=1269190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 1269191 . C . PASS END=1269191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 1269192 . A . PASS END=1269192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 1269193 . G . PASS END=1269193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 1269194 . C . PASS END=1269198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:18,0 chr1 1269199 . C . PASS END=1269199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr1 1269200 . T . PASS END=1269202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,645:0,43,255:19,0 chr1 1269203 . T . PASS END=1269203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1269204 . C . PASS END=1269204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 1269205 . C . PASS END=1269214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 1269215 . C . PASS END=1269215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1269216 . T . PASS END=1269216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 1269217 . C . PASS END=1269217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1269218 . A . PASS END=1269218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 1269219 . C . PASS END=1269219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:19,0 chr1 1269220 . G . PASS END=1269220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1269221 . G . PASS END=1269221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,776:0,33,255:21,0 chr1 1269222 . G . PASS END=1269225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,836:0,53,255:21,0 chr1 1269226 . C . PASS END=1269226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 1269227 . C . PASS END=1269227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr1 1269228 . T . PASS END=1269233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:26:0,62,913:0,62,255:26,0 chr1 1269234 . C . PASS END=1269234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:24,0 chr1 1269235 . A . PASS END=1269236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 1269237 . T . PASS END=1269237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,854:0,39,255:24,0 chr1 1269238 . C . PASS END=1269240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1269241 . C . PASS END=1269241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:25,0 chr1 1269242 . C . PASS END=1269242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 1269243 . T . PASS END=1269244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:26,0 chr1 1269245 . C . PASS END=1269246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 1269247 . G . PASS END=1269247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:26,0 chr1 1269248 . G . PASS END=1269251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,961:0,65,255:27,0 chr1 1269252 . C . PASS END=1269252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:27,0 chr1 1269253 . C . PASS END=1269256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 1269257 . A . PASS END=1269257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,826:0,43,255:27,0 chr1 1269258 . T . PASS END=1269259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1133:0,93,255:31,0 chr1 1269260 . T . PASS END=1269260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 1269261 . T . PASS END=1269261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 1269262 . C . PASS END=1269262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 1269263 . G . PASS END=1269269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 1269270 . C . PASS END=1269270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 1269271 . A . PASS END=1269271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 1269272 . G . PASS END=1269276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:29,0 chr1 1269277 . G . PASS END=1269277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 1269278 . C . PASS END=1269278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 1269279 . C . PASS END=1269279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:30,0 chr1 1269280 . T . PASS END=1269281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr1 1269282 . T . PASS END=1269282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1058:0,65,255:29,0 chr1 1269283 . G . PASS END=1269298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1216:0,83,255:31,0 chr1 1269299 . C . PASS END=1269299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 1269300 . T . PASS END=1269322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:32,0 chr1 1269323 . T . PASS END=1269323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr1 1269324 . G . PASS END=1269328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 1269329 . T . PASS END=1269329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 1269330 . G . PASS END=1269344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1041:0,84,255:28,0 chr1 1269345 . T . PASS END=1269345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 1269346 . G . PASS END=1269349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 1269350 . A . PASS END=1269350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr1 1269351 . T . PASS END=1269354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1269355 . G . PASS END=1269355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 1269356 . G . PASS END=1269357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 1269358 . G . PASS END=1269359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:25,0 chr1 1269360 . A . PASS END=1269368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:31,0 chr1 1269369 . T . PASS END=1269369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr1 1269370 . G . PASS END=1269444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1123:0,88,255:35,0 chr1 1269445 . G . PASS END=1269486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:24,0 chr1 1269487 . C . PASS END=1269503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,49,255:19,0 chr1 1269504 . T . PASS END=1269504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:14,0 chr1 1269505 . G . PASS END=1269516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr1 1269517 . C . PASS END=1269553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr1 1269554 . T C, 100.72 PASS DP=18;MQ=243.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,7,0:0,11,0:51:138,54,0,668,54,668:255,54,0:0,0:1.0072e+02,5.0716e+01,3.6758e-05,4.5000e+02,8.5486e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,11:0,0,14,4 chr1 1269555 . G . PASS END=1269555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 1269556 . C . PASS END=1269559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 1269560 . A . PASS END=1269560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 1269561 . A . PASS END=1269563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 1269564 . G . PASS END=1269565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr1 1269566 . G . PASS END=1269574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1269575 . C . PASS END=1269575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 1269576 . T . PASS END=1269576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1269577 . C . PASS END=1269577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:18,0 chr1 1269578 . A . PASS END=1269579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1269580 . C . PASS END=1269580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:17,0 chr1 1269581 . T . PASS END=1269581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,62,255:19,0 chr1 1269582 . T . PASS END=1269589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,760:0,63,255:21,0 chr1 1269590 . C . PASS END=1269591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 1269592 . G . PASS END=1269592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 1269593 . G . PASS END=1269602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 1269603 . T . PASS END=1269603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 1269604 . C . PASS END=1269604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1269605 . A . PASS END=1269605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:21,0 chr1 1269606 . C . PASS END=1269607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 1269608 . T . PASS END=1269610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 1269611 . G . PASS END=1269611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1269612 . T . PASS END=1269612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:19,0 chr1 1269613 . C . PASS END=1269615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1269616 . C . PASS END=1269616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 1269617 . T . PASS END=1269618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1269619 . T . PASS END=1269620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 1269621 . T . PASS END=1269624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 1269625 . C . PASS END=1269626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,767:0,50,255:22,0 chr1 1269627 . T . PASS END=1269628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 1269629 . C . PASS END=1269631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 1269632 . G . PASS END=1269632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1269633 . C . PASS END=1269633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr1 1269634 . C . PASS END=1269634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 1269635 . A . PASS END=1269635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,737:0,22,255:20,0 chr1 1269636 . A . PASS END=1269636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,635:0,19,255:18,0 chr1 1269637 . T . PASS END=1269638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 1269639 . T . PASS END=1269640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 1269641 . C . PASS END=1269641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 1269642 . A . PASS END=1269643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 1269644 . G . PASS END=1269648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr1 1269649 . C . PASS END=1269650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 1269651 . T . PASS END=1269651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:22,0 chr1 1269652 . C . PASS END=1269653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1269654 . G . PASS END=1269654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 1269655 . G . PASS END=1269656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 1269657 . C . PASS END=1269657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 1269658 . C . PASS END=1269659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 1269660 . C . PASS END=1269661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 1269662 . G . PASS END=1269663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1269664 . G . PASS END=1269664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 1269665 . C . PASS END=1269670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:25,0 chr1 1269671 . G . PASS END=1269671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 1269672 . G . PASS END=1269673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1269674 . G . PASS END=1269674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 1269675 . C . PASS END=1269675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1269676 . C . PASS END=1269676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 1269677 . C . PASS END=1269677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1269678 . T . PASS END=1269678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 1269679 . C . PASS END=1269681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 1269682 . G . PASS END=1269682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 1269683 . C . PASS END=1269683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr1 1269684 . T . PASS END=1269688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,886:0,72,255:24,0 chr1 1269689 . G . PASS END=1269717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,668:0,43,255:19,0 chr1 1269718 . G . PASS END=1269718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1269719 . C . PASS END=1269749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 1269750 . G . PASS END=1269750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 1269751 . G . PASS END=1269769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,584:0,40,255:19,0 chr1 1269770 . T . PASS END=1269770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr1 1269771 . T . PASS END=1269786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 1269787 . T . PASS END=1269796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:34:17:0,34,582:0,34,255:13,0 chr1 1269797 . C . PASS END=1269797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:12,0 chr1 1269798 . A . PASS END=1269806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 1269807 . A . PASS END=1269833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:23:8:0,23,288:0,23,255:9,0 chr1 1269834 . A . PASS END=1269836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 1269837 . A . PASS END=1269837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1269838 . T . PASS END=1269838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 1269839 . G . PASS END=1269844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 1271514 . G . PASS END=1271514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 1271522 . T . PASS END=1271522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 1271523 . C . PASS END=1271548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 1271549 . G . PASS END=1271549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 1271550 . G . PASS END=1271555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1271556 . C . PASS END=1271559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1271560 . T . PASS END=1271560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 1271561 . A . PASS END=1271561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 1271562 . G . PASS END=1271608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,475:0,45,255:17,0 chr1 1271609 . A . PASS END=1271609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 1271610 . G . PASS END=1271623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:18,0 chr1 1271624 . A . PASS END=1271624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,603:0,38,255:17,0 chr1 1271625 . G . PASS END=1271635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,635:0,40,255:19,0 chr1 1271636 . G . PASS END=1271636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr1 1271637 . G . PASS END=1271645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,623:0,43,255:19,0 chr1 1271646 . C . PASS END=1271646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,579:0,10,255:15,0 chr1 1271647 . C . PASS END=1271655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 1271656 . T . PASS END=1271657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1271658 . T . PASS END=1271658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:19,0 chr1 1271659 . A . PASS END=1271662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 1271663 . C . PASS END=1271663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 1271664 . T . PASS END=1271664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,668:0,33,255:20,0 chr1 1271665 . T . PASS END=1271665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1271666 . G . PASS END=1271666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 1271667 . G . PASS END=1271667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1271668 . T . PASS END=1271669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:20,0 chr1 1271670 . G . PASS END=1271670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1271671 . T . PASS END=1271671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:18,0 chr1 1271672 . G . PASS END=1271675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1271676 . T . PASS END=1271676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 1271677 . G . PASS END=1271678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1271679 . G . PASS END=1271679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr1 1271680 . G . PASS END=1271684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1271685 . G . PASS END=1271687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,654:0,46,255:19,0 chr1 1271688 . A . PASS END=1271688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:18,0 chr1 1271689 . G . PASS END=1271689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 1271690 . C . PASS END=1271692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1271693 . C . PASS END=1271693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:19,0 chr1 1271694 . G . PASS END=1271695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1271696 . G . PASS END=1271696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 1271697 . G . PASS END=1271698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1271699 . G . PASS END=1271699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 1271700 . G . PASS END=1271707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 1271708 . G . PASS END=1271708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 1271709 . G . PASS END=1271709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1271710 . C . PASS END=1271710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 1271711 . C . PASS END=1271716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1271717 . G . PASS END=1271717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 1271718 . C . PASS END=1271721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,715:0,63,255:21,0 chr1 1271722 . G . PASS END=1271722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 1271723 . G . PASS END=1271727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,799:0,66,255:22,0 chr1 1271728 . T . PASS END=1271728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 1271729 . G . PASS END=1271729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1271730 . C . PASS END=1271730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 1271731 . C . PASS END=1271734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1271735 . G . PASS END=1271735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 1271736 . C . PASS END=1271739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1271740 . G . PASS END=1271740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 1271741 . C . PASS END=1271742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 1271743 . G . PASS END=1271745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:23,0 chr1 1271746 . C . PASS END=1271747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1271748 . G . PASS END=1271748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 1271749 . C . PASS END=1271749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 1271750 . C . PASS END=1271763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 1271764 . A . PASS END=1271764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 1271765 . G . PASS END=1271766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 1271767 . T . PASS END=1271767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 1271768 . G . PASS END=1271770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr1 1271771 . C . PASS END=1271771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 1271772 . C . PASS END=1271845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:22:0,62,815:0,62,255:26,0 chr1 1271846 . A . PASS END=1271848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 1271849 . G . PASS END=1271860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:20,0 chr1 1271861 . G . PASS END=1271895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,527:0,42,255:19,0 chr1 1272425 . T . PASS END=1272435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:26,0 chr1 1273357 . C . PASS END=1273367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 1273368 . T . PASS END=1273368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 1273369 . G . PASS END=1273369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1273370 . A . PASS END=1273377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 1273378 . T . PASS END=1273378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 1273379 . G . PASS END=1273400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 1273401 . C . PASS END=1273402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr1 1273403 . C . PASS END=1273415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 1273416 . G . PASS END=1273416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1273417 . C . PASS END=1273433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1273434 . G . PASS END=1273434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 1273435 . G . PASS END=1273437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 1273438 . G . PASS END=1273438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 1273439 . T . PASS END=1273439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 1273440 . C . PASS END=1273442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 1273443 . G . PASS END=1273443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 1273444 . G . PASS END=1273445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 1273446 . T . PASS END=1273446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,468:0,17,255:15,0 chr1 1273447 . A . PASS END=1273448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:16,0 chr1 1273449 . T . PASS END=1273449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 1273450 . G . PASS END=1273452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1273453 . A . PASS END=1273454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 1273455 . G . PASS END=1273468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,515:0,41,255:15,0 chr1 1273469 . C . PASS END=1273469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 1273470 . A . PASS END=1273470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1273471 . G . PASS END=1273471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 1273472 . A . PASS END=1273473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1273474 . G . PASS END=1273474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,437:0,14,255:13,0 chr1 1273475 . C . PASS END=1273492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 1273493 . G . PASS END=1273506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr1 1273507 . G . PASS END=1273507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 1273508 . C . PASS END=1273508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 1273509 . G . PASS END=1273509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1273510 . T . LowGQ END=1273510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,488:7,0,255:14,0 chr1 1273511 . G . PASS END=1273548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:19,0 chr1 1273549 . T . PASS END=1273549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:16,0 chr1 1273550 . C . PASS END=1273553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 1273554 . G . PASS END=1273555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 1273556 . G . PASS END=1273558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1273559 . G . PASS END=1273563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 1273649 . T . LowGQ END=1273649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,483:23,0,255:14,0 chr1 1273650 . G . PASS END=1273650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,620:0,16,255:16,0 chr1 1273651 . C . PASS END=1273651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,49,255:16,0 chr1 1273652 . T . LowGQ END=1273652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,6:22:0:22:0,0,477:70,0,255:16,0 chr1 1273653 . G . PASS END=1273654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,588:0,13,255:15,0 chr1 1273655 . A . LowGQ END=1273656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,593:3,0,255:16,0 chr1 1273657 . A . PASS END=1273659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,588:0,13,255:16,0 chr1 1273660 . T . LowGQ END=1273661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,602:0,0,255:17,0 chr1 1273662 . C . PASS END=1273662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,676:0,19,255:17,0 chr1 1273663 . C . PASS END=1273664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 1273665 . G . LowGQ END=1273666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,459:76,0,255:17,0 chr1 1273667 . A . PASS END=1273667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,637:0,30,255:17,0 chr1 1273668 . G . LowGQ END=1273668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,539:25,0,255:16,0 chr1 1273669 . A . PASS END=1273670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:22:0,14,604:0,14,255:18,0 chr1 1273671 . G . LowGQ END=1273671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,559:34,0,255:18,0 chr1 1273672 . T . LowGQ END=1273672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,851:1,0,255:24,0 chr1 1273673 . A . PASS END=1273673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,953:0,40,255:24,0 chr1 1273674 . G . PASS END=1273675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,898:0,37,255:24,0 chr1 1273676 . A . PASS END=1273676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,928:0,23,255:24,0 chr1 1273677 . G . LowGQ END=1273677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,820:1,0,255:24,0 chr1 1273678 . C . PASS END=1273678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 1273679 . A . PASS END=1273679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr1 1273680 . C . LowGQ END=1273681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:28:0,0,842:0,0,255:24,0 chr1 1273682 . G . PASS END=1273682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:10:30:0,10,920:0,10,255:26,0 chr1 1273683 . C . PASS END=1273683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,949:0,43,255:26,0 chr1 1273684 . T . LowGQ END=1273684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,897:12,0,255:26,0 chr1 1273685 . C . PASS END=1273685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:26,0 chr1 1273686 . G . PASS END=1273686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,959:0,18,255:26,0 chr1 1273687 . G . PASS END=1273687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:26,0 chr1 1273688 . A . PASS END=1273688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:2:30:0,2,912:0,2,255:26,0 chr1 1273689 . G . PASS END=1273689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,975:0,40,255:26,0 chr1 1273690 . A . PASS END=1273690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,813:0,24,255:26,0 chr1 1273691 . A . PASS END=1273691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:26,0 chr1 1273692 . G . LowGQ END=1273692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,851:1,0,255:25,0 chr1 1273693 . G . PASS END=1273693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,939:0,10,255:25,0 chr1 1273694 . T . PASS END=1273694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:25,0 chr1 1273695 . G . PASS END=1273695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,900:0,23,255:25,0 chr1 1273696 . A . PASS END=1273697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,915:0,40,255:26,0 chr1 1273698 . C . PASS END=1273698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,936:0,23,255:25,0 chr1 1273699 . T . PASS END=1273699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,969:0,40,255:25,0 chr1 1273700 . T . PASS END=1273700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:26,0 chr1 1273701 . G . PASS END=1273701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,977:0,40,255:26,0 chr1 1273702 . T . PASS END=1273702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1273703 . T . PASS END=1273703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:25,0 chr1 1273704 . G . PASS END=1273704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,969:0,18,255:26,0 chr1 1273705 . A . PASS END=1273705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr1 1273706 . C . PASS END=1273707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,937:0,29,255:26,0 chr1 1273708 . G . PASS END=1273708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr1 1273709 . T . PASS END=1273709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,908:0,15,255:26,0 chr1 1273710 . G . PASS END=1273710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,953:0,37,255:25,0 chr1 1273711 . T . PASS END=1273711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:25,0 chr1 1273712 . G . PASS END=1273712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:25,0 chr1 1273713 . C . PASS END=1273713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,961:0,37,255:25,0 chr1 1273714 . C . PASS END=1273714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:25,0 chr1 1273715 . G . PASS END=1273715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,953:0,10,255:26,0 chr1 1273716 . C . PASS END=1273716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1273717 . A . PASS END=1273717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,984:0,40,255:26,0 chr1 1273718 . G . LowGQ END=1273718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:29:0,0,906:7,0,255:25,0 chr1 1273719 . G . PASS END=1273720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,915:0,32,255:26,0 chr1 1273721 . A . PASS END=1273721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1273722 . G . PASS END=1273723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:27:0,45,955:0,45,255:27,0 chr1 1273724 . C . PASS END=1273734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:30,0 chr1 1273735 . A . PASS END=1273735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 1273736 . A . PASS END=1273776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1074:0,80,255:31,0 chr1 1273777 . C . PASS END=1273778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:74:30:0,74,1078:0,74,255:26,0 chr1 1273779 . C . PASS END=1273779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1273780 . T . PASS END=1273780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 1273781 . C . PASS END=1273785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 1273786 . T . PASS END=1273787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1115:0,77,255:27,0 chr1 1273788 . T . PASS END=1273788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,831:0,37,255:22,0 chr1 1273789 . G . PASS END=1273790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 1273791 . G . PASS END=1273791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:24,0 chr1 1273792 . T . PASS END=1273816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:25,0 chr1 1273902 . C . PASS END=1273971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,562:0,40,255:19,0 chr1 1273972 . C . PASS END=1273974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1273975 . C . PASS END=1273975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 1273976 . A . PASS END=1273978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 1273979 . A . PASS END=1273979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 1273980 . C . PASS END=1273981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 1273982 . C . PASS END=1273982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 1273983 . G . PASS END=1273984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1273985 . A . PASS END=1273985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 1273986 . C . PASS END=1273998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 1273999 . G . PASS END=1274011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:19:0,44,712:0,44,255:19,0 chr1 1274012 . G . PASS END=1274012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:16,0 chr1 1274013 . T . PASS END=1274033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 1274667 . G . PASS END=1274819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:82:37:0,82,1468:0,82,255:40,0 chr1 1274962 . C . PASS END=1274974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1008:0,78,255:26,0 chr1 1274975 . G . PASS END=1274976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1274977 . A . PASS END=1274977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr1 1274978 . G . PASS END=1274990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:28,0 chr1 1274991 . G . PASS END=1274991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 1274992 . T . PASS END=1274993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 1274994 . G . PASS END=1275004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 1275005 . C . PASS END=1275009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1275010 . C . PASS END=1275029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr1 1275116 . C . PASS END=1275116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1275117 . C . PASS END=1275117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 1275118 . C . PASS END=1275118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1275119 . G . PASS END=1275119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 1275120 . T . PASS END=1275122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1275123 . G . PASS END=1275123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 1275124 . G . PASS END=1275129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 1275130 . G . PASS END=1275130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 1275131 . A . PASS END=1275132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 1275133 . C . PASS END=1275140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 1275141 . G . PASS END=1275141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 1275142 . C . PASS END=1275158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:33,0 chr1 1275159 . C . PASS END=1275159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr1 1275160 . A . PASS END=1275192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1153:0,80,255:33,0 chr1 1275418 . C . PASS END=1275422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 1275423 . G . PASS END=1275423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 1275424 . C . PASS END=1275424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 1275425 . A . PASS END=1275426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,628:0,54,255:18,0 chr1 1275427 . C . PASS END=1275427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 1275428 . A . PASS END=1275432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,627:0,40,255:17,0 chr1 1275433 . G . PASS END=1275435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,568:0,18,255:17,0 chr1 1275436 . G . PASS END=1275463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 1275464 . G . PASS END=1275481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,878:0,61,255:25,0 chr1 1275482 . G . PASS END=1275482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 1275483 . A . PASS END=1275485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 1275486 . C . PASS END=1275486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 1275487 . A . PASS END=1275487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 1275488 . A . PASS END=1275488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:27:25:0,27,671:0,27,255:21,0 chr1 1275489 . T . PASS END=1275496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 1275497 . C . PASS END=1275498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 1275499 . G . PASS END=1275499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1275500 . C . PASS END=1275500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 1275501 . C . PASS END=1275502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1275503 . T . PASS END=1275503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,829:0,44,255:22,0 chr1 1275504 . C . PASS END=1275508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 1275509 . C . PASS END=1275509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 1275510 . G . PASS END=1275510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 1275511 . G . PASS END=1275511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 1275512 . T . PASS END=1275512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 1275513 . C . PASS END=1275513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:21,0 chr1 1275514 . G . PASS END=1275514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1275515 . T . PASS END=1275515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 1275516 . T . PASS END=1275516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1275517 . G . PASS END=1275517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 1275518 . C . PASS END=1275520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 1275521 . T . PASS END=1275522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 1275523 . C . PASS END=1275532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 1275533 . C . PASS END=1275533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:22,0 chr1 1275534 . T . PASS END=1275541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,799:0,69,255:24,0 chr1 1275542 . A . PASS END=1275542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 1275543 . G . PASS END=1275543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 1275544 . A . PASS END=1275544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,784:0,41,255:23,0 chr1 1275545 . A . PASS END=1275549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 1275550 . A . PASS END=1275550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,681:0,55,255:23,0 chr1 1275551 . T . PASS END=1275557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,868:0,72,255:24,0 chr1 1275627 . C . PASS END=1275636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 1275637 . C . PASS END=1275637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:23,0 chr1 1275638 . G . PASS END=1275644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 1275645 . T . PASS END=1275645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 1275646 . G . PASS END=1275648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 1275649 . G . PASS END=1275649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:20,0 chr1 1275650 . A . PASS END=1275652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 1275653 . T . PASS END=1275653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,742:0,36,255:20,0 chr1 1275654 . T . PASS END=1275655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1275656 . A . PASS END=1275656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:17,0 chr1 1275657 . G . PASS END=1275659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 1275660 . A . PASS END=1275662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 1275663 . T . PASS END=1275671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 1275672 . C . PASS END=1275675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1275676 . T . PASS END=1275678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 1275679 . G . PASS END=1275689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:18,0 chr1 1275690 . A . PASS END=1275690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:9:19:0,9,515:0,9,255:16,0 chr1 1275691 . G . PASS END=1275692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,574:0,51,255:17,0 chr1 1275693 . A . PASS END=1275694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 1275695 . G . PASS END=1275696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,646:0,54,255:19,0 chr1 1275790 . C . PASS END=1275791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 1275792 . G . PASS END=1275792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 1275793 . G . PASS END=1275799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 1275800 . T . PASS END=1275800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 1275801 . G . PASS END=1275812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 1275813 . G . PASS END=1275813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr1 1275814 . C . PASS END=1275814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 1275815 . T . PASS END=1275829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,726:0,69,255:24,0 chr1 1275830 . T . PASS END=1275830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 1275831 . T . PASS END=1275838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,884:0,72,255:24,0 chr1 1275839 . C . PASS END=1275846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,59,255:19,0 chr1 1275847 . T . PASS END=1275848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 1275849 . T . PASS END=1275849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:20,0 chr1 1275850 . G . PASS END=1275851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1275852 . A . PASS END=1275862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:53:20:0,53,828:0,53,255:19,0 chr1 1275863 . T . PASS END=1275868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 1275869 . G . PASS END=1275883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr1 1277047 . C . PASS END=1277047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 1277048 . T . PASS END=1277048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 1277049 . G . PASS END=1277052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 1277053 . G . PASS END=1277057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 1277058 . G . PASS END=1277066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 1277067 . G . PASS END=1277067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1277068 . T . PASS END=1277069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1277070 . C . PASS END=1277102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,692:0,47,255:20,0 chr1 1277103 . G . PASS END=1277113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr1 1277114 . T . PASS END=1277114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 1277115 . G . PASS END=1277118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1277119 . G . PASS END=1277119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 1277120 . C . PASS END=1277120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1277121 . G . PASS END=1277123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 1277124 . G . PASS END=1277125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 1277126 . C . PASS END=1277128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:19,0 chr1 1277129 . G . PASS END=1277129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:18,0 chr1 1277130 . G . PASS END=1277145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,743:0,44,255:19,0 chr1 1277146 . C . PASS END=1277146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr1 1277147 . G . PASS END=1277147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,721:0,32,255:17,0 chr1 1277148 . C . PASS END=1277157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:18,0 chr1 1277158 . C . PASS END=1277161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 1277162 . T . PASS END=1277167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:15,0 chr1 1277168 . G . PASS END=1277173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 1277174 . T . PASS END=1277185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:11:0,26,405:0,26,255:9,0 chr1 1277433 . C . PASS END=1277441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:33,0 chr1 1277442 . G . PASS END=1277442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:30,0 chr1 1277443 . G . PASS END=1277495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:32,0 chr1 1277496 . T . PASS END=1277505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1277506 . C . PASS END=1277506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,1000:0,40,255:25,0 chr1 1277507 . A . PASS END=1277511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1061:0,71,255:26,0 chr1 1277512 . G . PASS END=1277512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 1277513 . T . PASS END=1277513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1277514 . C . PASS END=1277517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1277518 . G . PASS END=1277529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:26,0 chr1 1277530 . A . PASS END=1277530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr1 1277531 . T . PASS END=1277532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 1277533 . T C, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,12,0:0,14,0:75:163,78,0,1008,78,1008:255,78,0:0,0:1.2525e+02,7.5253e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,17:0,0,15,11 chr1 1277534 . G . PASS END=1277536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 1277743 . T . PASS END=1277745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 1277746 . A . PASS END=1277752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 1277753 . G . PASS END=1277756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1277757 . C . PASS END=1277758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,984:0,65,255:26,0 chr1 1277759 . G . PASS END=1277761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 1277762 . A . PASS END=1277762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1277763 . G . PASS END=1277764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 1277765 . C . PASS END=1277765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 1277766 . C . PASS END=1277772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:31,0 chr1 1277773 . C . PASS END=1277773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 1277774 . C . PASS END=1277787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:33,0 chr1 1277788 . A . PASS END=1277789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr1 1277790 . A . PASS END=1277793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1440:0,102,255:35,0 chr1 1277794 . G . PASS END=1277794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 1277795 . G . PASS END=1277803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1363:0,95,255:37,0 chr1 1277804 . C . PASS END=1277804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:36,0 chr1 1277805 . T . PASS END=1277844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:35:0,96,1333:0,97,255:37,0 chr1 1277845 . G . PASS END=1277846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr1 1277847 . A . PASS END=1277857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:34,0 chr1 1277858 . G . PASS END=1277859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 1277860 . A . PASS END=1277861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 1277862 . C . PASS END=1277864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 1278069 . C . PASS END=1278138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:44:0,88,1574:0,88,255:40,0 chr1 1284276 . C . PASS END=1284280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 1284281 . G . PASS END=1284286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 1284287 . G . PASS END=1284287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 1284288 . T . PASS END=1284307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:18,0 chr1 1284308 . T . PASS END=1284308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 1284309 . T . PASS END=1284313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr1 1284314 . G . PASS END=1284319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 1284320 . C . PASS END=1284323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1284324 . G . PASS END=1284330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1284331 . T . PASS END=1284331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 1284332 . G . PASS END=1284395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,861:0,66,255:24,0 chr1 1284396 . T . PASS END=1284400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 1284401 . C . PASS END=1284408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1284409 . C . PASS END=1284409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 1284410 . C . PASS END=1284420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 1284421 . G . PASS END=1284426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:19,0 chr1 1284427 . T . PASS END=1284445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 1288681 . T . PASS END=1288706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 1288707 . A . PASS END=1288707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 1288708 . A . PASS END=1288712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 1288984 . C . PASS END=1288986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1288987 . T . PASS END=1288987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,654:0,49,255:19,0 chr1 1288988 . T . PASS END=1288988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1288989 . T . PASS END=1288989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 1288990 . G . PASS END=1288992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1288993 . G . PASS END=1288995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,713:0,49,255:19,0 chr1 1288996 . C . PASS END=1288996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1288997 . T . PASS END=1289001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1289002 . C . PASS END=1289005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1289006 . A . PASS END=1289009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1289228 . C . PASS END=1289230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,548:0,54,255:18,0 chr1 1289231 . T . PASS END=1289231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:16,0 chr1 1289232 . G . PASS END=1289254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:18:0,47,645:0,47,255:20,0 chr1 1289255 . G . PASS END=1289255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 1289256 . C . PASS END=1289257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 1289258 . G . PASS END=1289270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:25,0 chr1 1289271 . C . PASS END=1289271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:22,0 chr1 1289272 . A . PASS END=1289272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 1289273 . G . PASS END=1289285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1155:0,90,255:30,0 chr1 1289286 . C . PASS END=1289286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 1289287 . T . PASS END=1289305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1101:0,80,255:32,0 chr1 1289306 . A . PASS END=1289306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 1289307 . A . PASS END=1289316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1125:0,93,255:32,0 chr1 1289317 . G . PASS END=1289321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1035:0,83,255:25,0 chr1 1289322 . G . PASS END=1289324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:20,0 chr1 1289325 . G . PASS END=1289326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:54:32:0,54,810:0,96,255:18,0 chr1 1289410 . C . PASS END=1289415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 1289416 . G . PASS END=1289428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:61:30:0,61,1080:0,61,255:26,0 chr1 1289429 . C . PASS END=1289432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 1289433 . T . PASS END=1289433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 1289434 . A . PASS END=1289480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1097:0,82,255:33,0 chr1 1289481 . T . PASS END=1289482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1103:0,60,255:29,0 chr1 1289483 . C . PASS END=1289483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 1289484 . T . PASS END=1289486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1289573 . C . PASS END=1289573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 1289574 . C . PASS END=1289590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,770:0,66,255:22,0 chr1 1289591 . T . PASS END=1289591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 1289592 . T . PASS END=1289593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1289594 . T . PASS END=1289594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 1289595 . G . PASS END=1289601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 1289602 . G . PASS END=1289602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 1289603 . T . PASS END=1289612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1289734 . C . PASS END=1289745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,637:0,48,255:17,0 chr1 1289746 . T . PASS END=1289746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 1289747 . G . PASS END=1289753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,645:0,51,255:18,0 chr1 1289754 . G . PASS END=1289757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 1289758 . G . PASS END=1289758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 1289759 . G . PASS END=1289766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 1289767 . T . PASS END=1289767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:21,0 chr1 1289768 . G . PASS END=1289768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 1289769 . A . PASS END=1289769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:21,0 chr1 1289770 . C . PASS END=1289771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 1289772 . A . PASS END=1289772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 1289773 . G . PASS END=1289773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 1289774 . T . PASS END=1289775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr1 1289776 . G . PASS END=1289776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 1289777 . C . PASS END=1289777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 1289778 . A . PASS END=1289778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,694:0,35,255:19,0 chr1 1289779 . G . PASS END=1289789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 1289790 . A . PASS END=1289790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1289791 . G . PASS END=1289791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 1289792 . C . PASS END=1289792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 1289793 . A . PASS END=1289794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr1 1289795 . C . PASS END=1289795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 1289796 . G . PASS END=1289802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1289803 . G . PASS END=1289803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:21,0 chr1 1289804 . C . PASS END=1289814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1289815 . G . PASS END=1289815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 1289816 . C . PASS END=1289816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 1289817 . T . PASS END=1289817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 1289818 . G . PASS END=1289818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 1289819 . C . PASS END=1289819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 1289820 . T . PASS END=1289820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1289821 . G . PASS END=1289821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 1289822 . G . PASS END=1289822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:20,0 chr1 1289823 . A . PASS END=1289823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:21,0 chr1 1289824 . A . PASS END=1289832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,799:0,66,255:22,0 chr1 1289833 . C . PASS END=1289834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 1289835 . C . PASS END=1289836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1289837 . G . PASS END=1289863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,586:0,40,255:19,0 chr1 1289864 . G . PASS END=1289864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:15,0 chr1 1289865 . T . PASS END=1289873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,570:0,43,255:17,0 chr1 1289874 . C . PASS END=1289874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:12,0 chr1 1289875 . G . PASS END=1289875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,526:0,4,255:11,0 chr1 1289876 . C . PASS END=1289878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,535:0,34,255:13,0 chr1 1289879 . C . PASS END=1289879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,390:0,15,255:10,0 chr1 1289880 . A . PASS END=1289881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,438:0,31,255:12,0 chr1 1289882 . T . PASS END=1289882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,471:0,1,255:11,0 chr1 1289883 . G . PASS END=1289888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:12,0 chr1 1289889 . T . PASS END=1289889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:9,0 chr1 1290062 . C . PASS END=1290064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 1290065 . G . PASS END=1290065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1290066 . G . PASS END=1290066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 1290067 . C . PASS END=1290094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,599:0,45,255:19,0 chr1 1290095 . T . PASS END=1290095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 1290096 . G . PASS END=1290104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1290105 . G . PASS END=1290165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,809:0,63,255:24,0 chr1 1290166 . T . PASS END=1290166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 1290167 . G . PASS END=1290175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:22,0 chr1 1290176 . A . PASS END=1290176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 1290177 . G . PASS END=1290181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 1290182 . G . PASS END=1290182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 1290183 . G . PASS END=1290188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1290189 . C . PASS END=1290228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 1290229 . G . PASS END=1290229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 1290230 . G . PASS END=1290241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 1290242 . G . PASS END=1290244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 1290245 . A . PASS END=1290245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1290246 . G . PASS END=1290246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1290247 . A . PASS END=1290247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 1290248 . A . PASS END=1290269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:22,0 chr1 1290270 . C . PASS END=1290302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 1290303 . G . PASS END=1290303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 1290304 . G . PASS END=1290335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr1 1290336 . G . PASS END=1290337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr1 1290338 . G . PASS END=1290355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,621:0,48,255:18,0 chr1 1290356 . C . PASS END=1290356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 1290357 . G . PASS END=1290359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 1290360 . G . PASS END=1290411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:23,0 chr1 1290412 . T . PASS END=1290413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 1290414 . C . PASS END=1290426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:20,0 chr1 1290427 . T . PASS END=1290429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 1290430 . G . PASS END=1290444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 1290445 . C . PASS END=1290481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 1290482 . C . PASS END=1290484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 1290485 . C . PASS END=1290498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1290499 . T . PASS END=1290511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 1290512 . A . PASS END=1290514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 1290515 . A . PASS END=1290522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:10,0 chr1 1290523 . G . PASS END=1290524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 1290525 . G . PASS END=1290526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1290527 . C . PASS END=1290532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 1290624 . G . PASS END=1290627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 1290628 . G . PASS END=1290628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr1 1290629 . T . PASS END=1290638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:29,0 chr1 1290639 . C . PASS END=1290639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 1290640 . C . PASS END=1290650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 1290651 . C . PASS END=1290671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:30,0 chr1 1290672 . A . PASS END=1290682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,80,255:25,0 chr1 1290683 . T . PASS END=1290683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:23,0 chr1 1290684 . G . PASS END=1290712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,913:0,62,255:24,0 chr1 1290713 . G . PASS END=1290725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr1 1290830 . C . PASS END=1290845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 1290846 . G . PASS END=1290847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 1290848 . A . PASS END=1290848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 1290849 . G . PASS END=1290849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 1290850 . T . PASS END=1290850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 1290851 . T . PASS END=1290861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 1290862 . A . PASS END=1290862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1290863 . A . PASS END=1290863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 1290864 . G . PASS END=1290883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 1290884 . G . PASS END=1290884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:11,0 chr1 1290885 . G . PASS END=1290931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 1290932 . A . PASS END=1291018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,243:0,24,243:9,0 chr1 1291019 . G . PASS END=1291019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 1291020 . G . PASS END=1291021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 1291022 . T . LowGQ END=1291022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:6,0 chr1 1291023 . C . PASS END=1291023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 1291024 . C . PASS END=1291024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 1291025 . A . PASS END=1291032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,235:8,0 chr1 1291033 . C . PASS END=1291051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,205:6,0 chr1 1291052 . G . PASS END=1291075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 1291076 . A . PASS END=1291076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 1291077 . G . PASS END=1291082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 1291083 . C . PASS END=1291083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 1291084 . G . PASS END=1291089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 1291090 . T . PASS END=1291090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 1291091 . C . PASS END=1291091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr1 1291092 . G . PASS END=1291107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:5,0 chr1 1291108 . C . LowGQ END=1291108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 1291109 . C . PASS END=1291112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:4,0 chr1 1291113 . A . LowGQ END=1291113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1291114 . G . PASS END=1291118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 1291119 . G . LowGQ END=1291119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1291120 . G . PASS END=1291120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1291121 . G . LowGQ END=1291132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,86:0,0,72:3,0 chr1 1292061 . C . PASS END=1292079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:36:0,91,1266:0,91,255:40,0 chr1 1292080 . A . PASS END=1292084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1551:0,110,255:38,0 chr1 1293836 . T . PASS END=1293836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,603:0,57,255:19,0 chr1 1293837 . C . PASS END=1293838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 1293839 . G . PASS END=1293840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,637:0,43,255:20,0 chr1 1293841 . A . PASS END=1293841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 1293842 . G . PASS END=1293842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:20,0 chr1 1293843 . A . PASS END=1293843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,637:0,11,255:20,0 chr1 1293844 . A . PASS END=1293844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 1293845 . G . PASS END=1293845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr1 1293846 . C . PASS END=1293847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 1293848 . C . PASS END=1293849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 1293850 . A . PASS END=1293851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 1293852 . T . PASS END=1293852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 1293853 . T . PASS END=1293854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 1293855 . C . PASS END=1293855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 1293856 . C . PASS END=1293857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 1293858 . A . PASS END=1293858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 1293859 . A . PASS END=1293862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr1 1293863 . G . PASS END=1293863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,709:0,35,255:21,0 chr1 1293864 . G . PASS END=1293867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr1 1293868 . C . PASS END=1293868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 1293869 . G . PASS END=1293875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1293876 . C . PASS END=1293877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,676:0,46,255:20,0 chr1 1293878 . G . PASS END=1293883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 1293884 . T . PASS END=1293884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 1296622 . C . PASS END=1296643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:34:0,89,1286:0,89,255:36,0 chr1 1309181 . T . PASS END=1309200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,499:0,45,255:17,0 chr1 1309201 . T . PASS END=1309201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 1309202 . C . PASS END=1309202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 1309203 . T . PASS END=1309204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr1 1309205 . G . PASS END=1309214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1309215 . C . PASS END=1309215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 1309216 . A . PASS END=1309230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 1309231 . C . PASS END=1309251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:22,0 chr1 1309252 . A . PASS END=1309252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,715:0,35,255:20,0 chr1 1309253 . G . PASS END=1309253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1309254 . A . PASS END=1309254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 1309255 . T . PASS END=1309255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 1309256 . G . PASS END=1309263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 1309264 . G . PASS END=1309264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr1 1309265 . G . PASS END=1309280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1309281 . A . PASS END=1309281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1309282 . T . PASS END=1309282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1309380 . C . PASS END=1309392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 1309393 . A . PASS END=1309398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,786:0,63,255:22,0 chr1 1309399 . C . PASS END=1309399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1309400 . C . PASS END=1309401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:25,0 chr1 1309402 . T . PASS END=1309422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,988:0,81,255:31,0 chr1 1309423 . A . PASS END=1309423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:28,0 chr1 1309424 . A . PASS END=1309480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1073:0,83,255:33,0 chr1 1309481 . T . PASS END=1309481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1028:0,49,255:32,0 chr1 1309482 . C . PASS END=1309505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1144:0,88,255:35,0 chr1 1309506 . T . PASS END=1309506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1218:0,75,255:34,0 chr1 1309507 . T . PASS END=1309555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:35:0,90,1327:0,97,255:36,0 chr1 1309556 . T . PASS END=1309556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1178:0,53,255:31,0 chr1 1309557 . C . PASS END=1309575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:34,0 chr1 1309576 . T . PASS END=1309598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,868:0,69,255:24,0 chr1 1309599 . C . PASS END=1309599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 1309600 . C . PASS END=1309611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,847:0,69,255:23,0 chr1 1309612 . G . PASS END=1309612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1309613 . T . PASS END=1309614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1309615 . T . PASS END=1309646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 1309647 . C . PASS END=1309650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1309651 . C . PASS END=1309661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 1309662 . G . PASS END=1309662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1309663 . C . PASS END=1309690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,653:0,44,255:19,0 chr1 1309691 . T . PASS END=1309691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:13,0 chr1 1309692 . C . PASS END=1309693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1309694 . C . PASS END=1309705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr1 1309706 . G . PASS END=1309706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:12,0 chr1 1309707 . C . PASS END=1309708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,482:0,6,255:12,0 chr1 1309709 . G . PASS END=1309712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1309713 . C . PASS END=1309716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 1309717 . T . PASS END=1309717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 1309718 . T . PASS END=1309729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 1309730 . A . PASS END=1309732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1309733 . C . PASS END=1309735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1309736 . C . PASS END=1309738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1309739 . T . PASS END=1309739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1309740 . A . PASS END=1309748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1309749 . G . PASS END=1309749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 1309750 . G . PASS END=1309750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1309751 . C . PASS END=1309751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 1309752 . C . PASS END=1309752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1309753 . G . PASS END=1309754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 1309755 . C . PASS END=1309755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 1309756 . G . PASS END=1309756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1309757 . A . PASS END=1309757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 1309758 . T . PASS END=1309758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:12,0 chr1 1309759 . G . PASS END=1309763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 1309764 . G . PASS END=1309803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:18,0 chr1 1309804 . A . PASS END=1309841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 1309842 . G . PASS END=1309842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 1309843 . C . PASS END=1309861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:19,0 chr1 1309862 . G . PASS END=1309862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 1309863 . A . PASS END=1309863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:18,0 chr1 1309864 . C . PASS END=1309899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr1 1309900 . G . PASS END=1309911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 1309912 . A . PASS END=1309913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 1309914 . C . PASS END=1309919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1309920 . C . PASS END=1309921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1309922 . C . PASS END=1309984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1039:0,80,255:34,0 chr1 1309985 . A . PASS END=1309985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1181:0,66,255:28,0 chr1 1309986 . G . PASS END=1310017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:30,0 chr1 1310018 . G . PASS END=1310018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 1310019 . A . PASS END=1310019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 1310020 . G . PASS END=1310022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:55:31:0,55,1116:0,55,255:31,0 chr1 1310023 . G . PASS END=1310036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1350:0,99,255:34,0 chr1 1310037 . T . PASS END=1310054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:34:0,80,1219:0,80,255:39,0 chr1 1310085 . C . PASS END=1310111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1380:0,98,255:38,0 chr1 1310112 . G . PASS END=1310135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,89,255:35,0 chr1 1310136 . T . PASS END=1310136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1322611 . T . PASS END=1322635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,869:0,69,255:26,0 chr1 1322636 . G . PASS END=1322769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1062:0,84,255:39,0 chr1 1322770 . A . PASS END=1322770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 1322771 . C . PASS END=1322771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1322772 . G . PASS END=1322772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1322773 . G . PASS END=1322778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1322779 . A . PASS END=1322806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,922:0,62,255:26,0 chr1 1322807 . T . PASS END=1322807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 1322808 . G . PASS END=1322820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 1322821 . G . PASS END=1322862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:19,0 chr1 1322863 . G . PASS END=1322871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1322872 . G . PASS END=1322875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1322876 . G . PASS END=1322893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 1322894 . G . PASS END=1322894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 1322895 . A . PASS END=1322896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1322897 . T . PASS END=1322897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 1322898 . C . PASS END=1322902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 1322903 . C . PASS END=1322903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1322904 . T . PASS END=1322912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 1322913 . A . PASS END=1322913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1322914 . G . PASS END=1322931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:12,0 chr1 1322932 . C . PASS END=1322942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 1322943 . T . PASS END=1322951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 1322952 . T . PASS END=1322953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1322954 . T . PASS END=1322954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 1322955 . C . PASS END=1322958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1322959 . T . PASS END=1322959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 1322960 . T . PASS END=1322962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1323157 . C . PASS END=1323158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 1323159 . C . PASS END=1323162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1057:0,87,255:30,0 chr1 1323163 . T . PASS END=1323163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 1323164 . T . PASS END=1323191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1125:0,80,255:34,0 chr1 1323192 . C . PASS END=1323237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:34:0,101,1318:0,101,255:39,0 chr1 1323238 . C . PASS END=1323238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr1 1323239 . C . PASS END=1323249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:38,0 chr1 1323334 . C . PASS END=1323362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,895:0,62,255:26,0 chr1 1323363 . C . PASS END=1323365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 1323366 . G . PASS END=1323366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 1323367 . G . PASS END=1323367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1323368 . C . PASS END=1323371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 1323372 . C . PASS END=1323398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1096:0,90,255:30,0 chr1 1323399 . A . PASS END=1323422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:26,0 chr1 1323423 . T . PASS END=1323423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 1323424 . T . PASS END=1323442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 1323443 . C . PASS END=1323443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 1323444 . C . PASS END=1323445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1325610 . C . PASS END=1325618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 1325619 . G . PASS END=1325651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,679:0,60,255:26,0 chr1 1325652 . C . PASS END=1325668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr1 1325669 . A . PASS END=1325669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 1325670 . A . PASS END=1325672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1325673 . G . PASS END=1325673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 1325674 . G . PASS END=1325710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:34,0 chr1 1325711 . T . PASS END=1325711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 1325712 . T . PASS END=1325719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1139:0,80,255:30,0 chr1 1325720 . T . PASS END=1325720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 1325721 . C . PASS END=1325747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1109:0,80,255:32,0 chr1 1325748 . C . PASS END=1325748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr1 1325749 . A . PASS END=1325751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 1325839 . C . PASS END=1325943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,114,1751:0,114,255:40,0 chr1 1326146 . C . PASS END=1326161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1341:0,95,255:38,0 chr1 1326162 . G . PASS END=1326162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 1326163 . C . PASS END=1326245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1119:0,82,255:39,0 chr1 1326677 . T . PASS END=1326687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,690:0,54,255:19,0 chr1 1326688 . G . PASS END=1326711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,837:0,63,255:23,0 chr1 1326712 . T . PASS END=1326712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 1326713 . G . PASS END=1326730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,793:0,66,255:26,0 chr1 1326731 . C . PASS END=1326737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 1326738 . G . PASS END=1326738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 1326739 . T . PASS END=1326747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr1 1326748 . C . PASS END=1326750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1326751 . T . PASS END=1326752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1326753 . C . PASS END=1326763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:27,0 chr1 1326764 . C . PASS END=1326767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1326768 . C . PASS END=1326787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 1326788 . G . PASS END=1326788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 1326789 . A . PASS END=1326800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1326801 . C . PASS END=1326819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 1326820 . T . PASS END=1326885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,659:0,44,255:19,0 chr1 1326886 . C . PASS END=1326889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 1326890 . C . PASS END=1326892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:14,0 chr1 1326893 . A . PASS END=1326911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 1326912 . G . PASS END=1326923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 1326924 . C . PASS END=1326924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 1326925 . C . PASS END=1326949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,272:0,24,255:9,0 chr1 1326950 . A . PASS END=1326950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 1326951 . G . PASS END=1326955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 1326956 . C . PASS END=1326956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 1326957 . T . PASS END=1326969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 1328162 . T . PASS END=1328169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1357:0,95,255:36,0 chr1 1328170 . C . PASS END=1328170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:34,0 chr1 1328171 . C . PASS END=1328183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1440:0,111,255:37,0 chr1 1328776 . C . PASS END=1328840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:68:0,120,1800:0,168,255:40,0 chr1 1330774 . C . PASS END=1330917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,143,255:40,0 chr1 1333613 . T . PASS END=1333794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:88:35:0,88,1231:0,88,255:40,0 chr1 1333795 . A . PASS END=1333795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:34,0 chr1 1333796 . G . PASS END=1333798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,105,1575:0,120,255:37,0 chr1 1333977 . C . PASS END=1334051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1103:0,89,255:36,0 chr1 1334368 . C . PASS END=1334375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 1334376 . G . PASS END=1334376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 1334377 . A . PASS END=1334403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:23,0 chr1 1334404 . G . PASS END=1334404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 1334405 . C . PASS END=1334405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 1334406 . A . PASS END=1334407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 1334408 . G . PASS END=1334408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:20,0 chr1 1334409 . C . PASS END=1334409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 1334410 . G . PASS END=1334411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,828:0,53,255:19,0 chr1 1334412 . A . PASS END=1334413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1334414 . C . PASS END=1334414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:19,0 chr1 1334415 . A . PASS END=1334422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:25,0 chr1 1334423 . G . PASS END=1334423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:22,0 chr1 1334424 . G . PASS END=1334426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,992:0,65,255:24,0 chr1 1334427 . G . PASS END=1334427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 1334428 . C . PASS END=1334429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1334430 . T . PASS END=1334430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 1334431 . G . PASS END=1334437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,909:0,62,255:28,0 chr1 1334438 . C . PASS END=1334439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1334440 . C . PASS END=1334443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1008:0,68,255:28,0 chr1 1334444 . G . PASS END=1334444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 1334445 . C . PASS END=1334445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1334446 . C . PASS END=1334450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 1334451 . A . PASS END=1334451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:22,0 chr1 1334452 . C . PASS END=1334466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,945:0,65,255:25,0 chr1 1334467 . C . PASS END=1334467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:19,0 chr1 1334468 . T . PASS END=1334468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1334469 . G . PASS END=1334469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 1334470 . T . PASS END=1334470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1334471 . G . PASS END=1334471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 1334472 . T . PASS END=1334472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1334473 . C . PASS END=1334477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 1334478 . T . PASS END=1334486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 1334487 . C . PASS END=1334487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 1334488 . T . PASS END=1334489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 1334490 . G . PASS END=1334490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 1334491 . A . PASS END=1334491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 1334492 . C . PASS END=1334492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 1334493 . A . PASS END=1334495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 1334496 . G . PASS END=1334510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:18,0 chr1 1334511 . A . PASS END=1334514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 1334515 . T . PASS END=1334515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 1334516 . G . PASS END=1334518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 1334519 . G . PASS END=1334519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 1334520 . T . PASS END=1334520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 1334521 . C . PASS END=1334529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 1334530 . G . PASS END=1334531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1334532 . C . PASS END=1334549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,660:0,44,255:19,0 chr1 1334550 . A . PASS END=1334550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:14,0 chr1 1334551 . G . PASS END=1334551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 1334552 . C . PASS END=1334553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:13,0 chr1 1334554 . C . PASS END=1334555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 1334556 . C . PASS END=1334582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,41,255:13,0 chr1 1334583 . A . PASS END=1334583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:10,1 chr1 1334584 . C . PASS END=1334584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:10:15:0,10,478:0,10,255:10,1 chr1 1334585 . C . LowGQ END=1334585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr1 1334586 . C . PASS END=1334586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 1334587 . C . PASS END=1334587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 1334588 . C . PASS END=1334592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 1334593 . A . PASS END=1334593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 1334594 . C . PASS END=1334615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:12:0,31,488:0,31,255:13,0 chr1 1334616 . C . PASS END=1334616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1334617 . C . PASS END=1334622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1334623 . C . PASS END=1334659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 1334660 . A . PASS END=1334660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 1334661 . C . PASS END=1334662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 1334663 . AGCC A, 0.03 DRAGENIndelHardQUAL DP=12;MQ=250.00;MQRankSum=2.041;ReadPosRankSum=0.322;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,2,0:0.167,0.000:12:4,1,0:6,1,0:21:0,6,56,30,288,312:19,0,255:10,3:3.2730e-02,2.1245e+01,7.4245e+01,6.4872e+01,3.3751e+02,3.4937e+02:0.00,15.00,18.00,34.77,49.77,37.77:3,7,0,2:7,3,1,1 chr1 1334664 . G . LowGQ END=1334667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:12:0,0,283:41,0,255:12,3 chr1 1334668 . C . PASS END=1334686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 1337463 . T . PASS END=1337468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:22:0,63,945:0,65,255:26,0 chr1 1337469 . G . PASS END=1337481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1160:0,83,255:33,0 chr1 1337482 . C . PASS END=1337482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr1 1337483 . T . PASS END=1337492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1119:0,82,255:32,0 chr1 1337493 . G . PASS END=1337493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:30,0 chr1 1337494 . C . PASS END=1337512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:32,0 chr1 1337513 . C . PASS END=1337513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:30,0 chr1 1337514 . C . PASS END=1337571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1181:0,88,255:36,0 chr1 1337572 . T . PASS END=1337572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1028:0,71,255:30,0 chr1 1337573 . T . PASS END=1337577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:32,0 chr1 1337578 . G . PASS END=1337578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1190:0,66,255:32,0 chr1 1337579 . T . PASS END=1337592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1189:0,83,255:34,0 chr1 1337593 . A . PASS END=1337593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:31,0 chr1 1337594 . T . PASS END=1337604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:34,0 chr1 1337605 . G . PASS END=1337622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,71,255:25,0 chr1 1337623 . A . PASS END=1337623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:22,0 chr1 1337624 . G . PASS END=1337636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 1337949 . C . PASS END=1337981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,113,1520:0,113,255:40,0 chr1 1340997 . T . PASS END=1341002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr1 1341003 . T . PASS END=1341009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,913:0,81,255:31,0 chr1 1341010 . A . PASS END=1341010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 1341011 . C . PASS END=1341011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 1341012 . C . PASS END=1341012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 1341013 . A . PASS END=1341013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 1341014 . C . PASS END=1341014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:31,0 chr1 1341015 . A . PASS END=1341266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:32:0,82,1172:0,82,255:40,0 chr1 1342289 . G . PASS END=1342377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:30:0,83,1125:0,83,255:40,0 chr1 1342378 . G . PASS END=1342379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1238:0,72,255:36,0 chr1 1342380 . T . PASS END=1342397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1207:0,91,255:36,0 chr1 1342398 . T . PASS END=1342398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 1342399 . G . PASS END=1342399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 1342511 . C . PASS END=1342564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1215:0,86,255:35,0 chr1 1342565 . C . PASS END=1342570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:30:0,63,945:0,74,255:26,0 chr1 1342571 . C . PASS END=1342590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,690:0,54,255:18,0 chr1 1342591 . A . PASS END=1342591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 1342592 . G . PASS END=1342597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 1354480 . T . PASS END=1354483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1354484 . C . PASS END=1354484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 1354485 . C . PASS END=1354497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:16,0 chr1 1354498 . G . PASS END=1354498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 1354499 . C . PASS END=1354499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1354500 . C . PASS END=1354500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 1354501 . C . PASS END=1354514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,596:0,48,255:16,0 chr1 1354515 . C G, 49.86 PASS DP=15;MQ=250.00;MQRankSum=3.183;ReadPosRankSum=2.257;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:4,1,0:4,6,0:48:85,0,50,250,286,537:255,0,254:8,0:4.9856e+01,6.6527e-05,5.3000e+01,2.5030e+02,3.2102e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,4,3:4,4,4,3 chr1 1354516 . C . PASS END=1354525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 1354526 . A . PASS END=1354526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,527:0,12,255:15,0 chr1 1354527 . G . PASS END=1354593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,559:0,41,255:19,0 chr1 1354594 . A G, 46.70 PASS DP=24;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=-0.716;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:10,1,0:5,8,0:46:81,0,50,310,532,841:255,0,255:13,0:4.6704e+01,1.1442e-04,5.3000e+01,3.0982e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,3,6:7,8,7,2 chr1 1354595 . G . PASS END=1354596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 1354597 . G . PASS END=1354597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 1354598 . G . PASS END=1354620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 1354621 . A . PASS END=1354628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 1354629 . C . PASS END=1354631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 1354632 . T . PASS END=1354637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 1354638 . C . PASS END=1354638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 1354639 . A . PASS END=1354639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1354640 . T . PASS END=1354640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:21,0 chr1 1354641 . G . PASS END=1354670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:26,0 chr1 1354671 . T . PASS END=1354671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:23,0 chr1 1354672 . C . PASS END=1354688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 1354689 . T . PASS END=1354689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 1354690 . A . PASS END=1354693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 1354694 . T . PASS END=1354695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 1354696 . C . PASS END=1354696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1354697 . A . PASS END=1354700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 1354701 . G . PASS END=1354710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 1354711 . G . PASS END=1354711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 1354712 . T . PASS END=1354727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 1354728 . C . PASS END=1354728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 1354729 . A . PASS END=1354769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,909:0,64,255:26,0 chr1 1354770 . T . PASS END=1354770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:22,0 chr1 1354771 . G . PASS END=1354771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 1354772 . A . PASS END=1354774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:22,0 chr1 1354775 . C . PASS END=1354808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,853:0,69,255:25,0 chr1 1354809 . G . PASS END=1354809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 1354810 . G . PASS END=1354831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:25,0 chr1 1354832 . A . PASS END=1354832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:24,0 chr1 1354833 . G . PASS END=1354839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,945:0,75,255:25,0 chr1 1354840 . T . PASS END=1354840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 1354841 . C . PASS END=1354854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,65,255:24,0 chr1 1354855 . C . PASS END=1354856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:51:27:0,51,765:0,65,255:17,0 chr1 1354857 . T . PASS END=1354857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:16,0 chr1 1354858 . G . PASS END=1354875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:18:0,42,630:0,54,255:18,0 chr1 1354876 . A . PASS END=1354876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 1354877 . T . PASS END=1354893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 1354894 . T . PASS END=1354929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 1355432 . C . PASS END=1355436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 1355437 . A . PASS END=1355437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 1355438 . G . PASS END=1355442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 1355443 . C . PASS END=1355487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,266:0,21,255:9,0 chr1 1355488 . G . PASS END=1355488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 1355489 . G . PASS END=1355507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 1355508 . C . PASS END=1355519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,233:6,0 chr1 1355520 . A . LowGQ END=1355802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 1355803 . G . PASS END=1355842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 1355843 . C . PASS END=1355865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,243:0,24,243:8,0 chr1 1355866 . C . PASS END=1355866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 1355867 . C . PASS END=1355869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 1355870 . G . PASS END=1355886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr1 1355887 . G . PASS END=1355887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 1355888 . G . PASS END=1355888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 1355889 . G . PASS END=1355889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 1355890 . C . PASS END=1355914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr1 1355915 . C . PASS END=1355915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 1355916 . A . PASS END=1355926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 1355927 . G . PASS END=1355928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 1355929 . C . PASS END=1355945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 1355946 . T . PASS END=1355946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 1355947 . G . PASS END=1355951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1355952 . G . PASS END=1355963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,451:0,39,255:13,0 chr1 1355964 . G . PASS END=1355964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 1355965 . C . PASS END=1355969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr1 1355970 . T . PASS END=1355970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 1355971 . C . PASS END=1355971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1355972 . C . PASS END=1355972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 1356177 . C . PASS END=1356177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 1356178 . T . PASS END=1356178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 1356179 . C . PASS END=1356197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,484:0,45,255:15,0 chr1 1356198 . T . PASS END=1356209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,459:0,39,255:13,0 chr1 1356210 . T . PASS END=1356210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 1356211 . G . PASS END=1356219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1356220 . G . PASS END=1356220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 1356221 . G . PASS END=1356224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 1356225 . G . PASS END=1356225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 1356226 . C . PASS END=1356229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1356230 . G . PASS END=1356230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 1356231 . C . PASS END=1356231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 1356232 . C . PASS END=1356232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 1356233 . C . PASS END=1356233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 1356234 . C . PASS END=1356238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 1356239 . C . PASS END=1356239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 1356240 . A . PASS END=1356241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 1356242 . G . PASS END=1356242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 1356243 . G . PASS END=1356244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 1356245 . C . PASS END=1356245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 1356246 . T . PASS END=1356272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,451:0,39,255:13,0 chr1 1356273 . A . PASS END=1356293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr1 1356294 . G . PASS END=1356298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1356299 . C . PASS END=1356322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,692:0,46,255:19,0 chr1 1356323 . C . PASS END=1356325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1356326 . C . PASS END=1356340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 1356341 . T . PASS END=1356342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,1 chr1 1356343 . C . LowGQ END=1356343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,531:8,0,255:17,1 chr1 1356344 . C . PASS END=1356345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,627:0,21,255:20,1 chr1 1356346 . C . PASS END=1356347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 1356348 . T . PASS END=1356359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:18,0 chr1 1356360 . C . PASS END=1356385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr1 1361508 . A . PASS END=1361508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 1361509 . T . PASS END=1361557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr1 1361558 . T . PASS END=1361559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 1361560 . C . PASS END=1361562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1361563 . A . PASS END=1361563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1361564 . C . PASS END=1361564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1361565 . A . PASS END=1361596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:19,0 chr1 1361597 . C . PASS END=1361603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:22,0 chr1 1361604 . G . PASS END=1361624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,984:0,65,255:26,0 chr1 1361625 . G . PASS END=1361637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1064:0,80,255:31,0 chr1 1361638 . C . PASS END=1361638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 1361639 . C . PASS END=1361640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 1361641 . C T, 49.73 PASS DP=32;MQ=249.20;MQRankSum=4.154;ReadPosRankSum=0.415;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,15,0:0.469,0.000:32:8,11,0:9,4,0:48:85,0,50,495,577,1072:255,0,255:16,0:4.9727e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,12,3:8,9,8,7 chr1 1361642 . G . PASS END=1361655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:30,0 chr1 1361656 . G . PASS END=1361656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 1361657 . G . PASS END=1361678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 1361679 . C . PASS END=1361712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1125:0,90,255:31,0 chr1 1361713 . T . PASS END=1361713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 1361714 . G . PASS END=1361739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1178:0,90,255:31,0 chr1 1361740 . A . PASS END=1361765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,74,255:26,0 chr1 1362934 . G . PASS END=1362952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 1362953 . C . PASS END=1362967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 1362968 . T . PASS END=1362968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1362969 . G . PASS END=1363011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 1363012 . C . PASS END=1363012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 1363013 . T . PASS END=1363018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 1363019 . T . PASS END=1363019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 1363020 . G . PASS END=1363024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 1363025 . C . PASS END=1363039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 1363040 . C . PASS END=1363041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1363042 . T . PASS END=1363067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 1363068 . G . PASS END=1363070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 1363071 . C . PASS END=1363071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 1363072 . C . PASS END=1363094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,249:6,0 chr1 1363095 . C . PASS END=1363103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:5:0,1,90:0,1,169:3,0 chr1 1363104 . C . PASS END=1363122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 1363123 . C . LowGQ END=1363123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,102:16,0,118:4,0 chr1 1363124 . C . PASS END=1363150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 1363151 . T . LowGQ END=1363151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 1363152 . C . PASS END=1363157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr1 1363158 . C . LowGQ END=1363158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 1363159 . T . PASS END=1363167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:4,0 chr1 1368613 . A . PASS END=1368644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1058:0,90,255:31,0 chr1 1368645 . T . PASS END=1368645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:30,0 chr1 1368646 . C . PASS END=1368646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1368647 . A T, 142.85 PASS DP=32;MQ=249.52;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,21,0:0,11,0:93:181,96,0,1211,96,1211:255,96,0:0,0:1.4285e+02,9.2853e+01,0.0000e+00,4.5000e+02,1.2762e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,18:0,0,15,17 chr1 1368648 . T . PASS END=1368648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 1368649 . C . PASS END=1368655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 1368656 . A . PASS END=1368656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 1368657 . G . PASS END=1368662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 1368663 . T . PASS END=1368668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:26,0 chr1 1369343 . G . PASS END=1369355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:22,0 chr1 1369356 . C . PASS END=1369356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 1369357 . G . PASS END=1369361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:25,0 chr1 1369362 . C . PASS END=1369364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,996:0,81,255:28,0 chr1 1369365 . G . PASS END=1369365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1369366 . A . PASS END=1369371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr1 1369372 . T . PASS END=1369372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 1369373 . G . PASS END=1369374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1369375 . G . PASS END=1369376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:28,0 chr1 1369377 . C . PASS END=1369390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 1369391 . C . PASS END=1369391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 1369392 . C . PASS END=1369400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1369401 . T . PASS END=1369421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,902:0,75,255:26,0 chr1 1369422 . T . PASS END=1369422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 1369423 . T . PASS END=1369430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,917:0,75,255:25,0 chr1 1369431 . A . PASS END=1369451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:19:0,48,720:0,57,255:19,0 chr1 1369576 . G . PASS END=1369585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,459:0,36,255:13,0 chr1 1369586 . C . PASS END=1369586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 1369587 . A . PASS END=1369598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 1369599 . G . PASS END=1369618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:17,0 chr1 1369619 . C . PASS END=1369619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 1369620 . T . PASS END=1369646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 1369647 . A . PASS END=1369648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1369649 . C . PASS END=1369673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:19,0 chr1 1369674 . C . PASS END=1369685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1369686 . C . PASS END=1369686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 1369687 . C . PASS END=1369721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:23,0 chr1 1369722 . A . PASS END=1369722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 1369723 . G . PASS END=1369746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:23,0 chr1 1369747 . A . PASS END=1369747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 1369748 . G . PASS END=1369755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 1369756 . C . PASS END=1369756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 1369757 . A . PASS END=1369766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 1369767 . C . PASS END=1369767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 1369768 . C . PASS END=1369768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 1369769 . A . PASS END=1369769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr1 1369770 . G . PASS END=1369771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 1369772 . C . PASS END=1369782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1369916 . G . PASS END=1369918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1369919 . A . PASS END=1369919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:11,0 chr1 1369920 . A . PASS END=1369920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:11,0 chr1 1369921 . G . PASS END=1369922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 1369923 . C . PASS END=1369923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 1369924 . G . PASS END=1369926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 1369927 . T . PASS END=1369927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 1369928 . G . PASS END=1369928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1369929 . C . PASS END=1369939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr1 1369940 . C . PASS END=1369940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 1369941 . A . PASS END=1369951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 1369952 . G . PASS END=1369955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 1369956 . C . PASS END=1369956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,782:0,17,255:20,0 chr1 1369957 . T . PASS END=1369957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 1369958 . C . PASS END=1369958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1369959 . A . PASS END=1369959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:21,0 chr1 1369960 . C . PASS END=1369970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr1 1369971 . G . PASS END=1369971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 1369972 . G . PASS END=1369998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 1369999 . C . PASS END=1369999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:22,0 chr1 1370000 . C . PASS END=1370019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:26,0 chr1 1370020 . T . PASS END=1370026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 1370027 . G . PASS END=1370029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 1370030 . G . PASS END=1370066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,71,255:26,0 chr1 1370067 . C G, 49.21 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=1.889;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:7,3,0:7,8,0:48:84,0,50,391,501,892:255,0,255:14,0:4.9214e+01,7.3776e-05,5.3000e+01,3.9097e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,6,5:6,8,6,5 chr1 1370068 . A . PASS END=1370086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 1370087 . T . PASS END=1370087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 1370088 . C . PASS END=1370088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 1370089 . T . PASS END=1370089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:20,0 chr1 1370090 . G . PASS END=1370104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:24,0 chr1 1370105 . T . PASS END=1370105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 1370106 . G . PASS END=1370106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:22,0 chr1 1370107 . G . PASS END=1370108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 1370109 . A . PASS END=1370109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 1370110 . G . PASS END=1370127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,900:0,72,255:24,0 chr1 1370128 . G . PASS END=1370128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 1370129 . A . PASS END=1370132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 1370133 . A . PASS END=1370133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 1370134 . G . PASS END=1370142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 1370143 . T . PASS END=1370143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 1370144 . A . PASS END=1370149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,906:0,72,255:24,0 chr1 1370150 . C . PASS END=1370150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 1370151 . T . PASS END=1370159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,925:0,75,255:25,0 chr1 1370160 . G . PASS END=1370218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr1 1370219 . C . PASS END=1370228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 1370229 . G . PASS END=1370229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1370230 . C . PASS END=1370231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1370232 . C . PASS END=1370239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 1370240 . C . PASS END=1370285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,862:0,66,255:26,0 chr1 1370286 . G . PASS END=1370305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1036:0,87,255:30,0 chr1 1370306 . A . PASS END=1370307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1370308 . C . PASS END=1370335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1164:0,83,255:31,0 chr1 1370336 . G . PASS END=1370336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1370337 . G . PASS END=1370528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:30:0,81,1163:0,81,255:40,0 chr1 1370529 . A . PASS END=1370530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:35:0,72,1080:0,89,255:24,0 chr1 1371129 . A . PASS END=1371133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 1371134 . C . PASS END=1371168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 1371169 . G . PASS END=1371201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr1 1372187 . G . PASS END=1372196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,645:0,51,255:18,0 chr1 1372197 . A . PASS END=1372197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr1 1372198 . G . PASS END=1372274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,541:0,40,255:19,0 chr1 1372275 . A . PASS END=1372275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 1372276 . C . PASS END=1372281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1372282 . G . PASS END=1372308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 1372309 . C . PASS END=1372313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1372314 . A . PASS END=1372314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1372315 . G . PASS END=1372321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1372322 . C . PASS END=1372322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1372323 . C . PASS END=1372329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1372330 . G . PASS END=1372330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 1372331 . G . PASS END=1372342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 1372343 . T . PASS END=1372343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 1372344 . C . PASS END=1372354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,612:0,45,255:16,0 chr1 1372355 . G . PASS END=1372355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 1372356 . C . PASS END=1372379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,605:0,40,255:18,0 chr1 1372380 . G . PASS END=1372380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 1372381 . T . PASS END=1372409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,534:0,54,255:19,0 chr1 1372410 . G . PASS END=1372410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 1372411 . C . PASS END=1372416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 1372417 . G . PASS END=1372422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1372423 . C . PASS END=1372439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr1 1372440 . G . PASS END=1372440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1372441 . G . PASS END=1372454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 1372455 . T . PASS END=1372455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 1372456 . C . PASS END=1372457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 1372458 . G . PASS END=1372458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 1372459 . G . PASS END=1372471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 1372472 . G . PASS END=1372472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr1 1372473 . T . PASS END=1372493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 1372494 . C . PASS END=1372494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 1372495 . T . PASS END=1372504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 1372505 . A . PASS END=1372505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 1372506 . C . PASS END=1372508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 1372509 . C . PASS END=1372509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 1372510 . T . PASS END=1372511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:18,0 chr1 1372512 . G . PASS END=1372512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 1372513 . G . PASS END=1372513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:18,0 chr1 1372514 . G . PASS END=1372514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:18,0 chr1 1372515 . T . PASS END=1372515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:18,0 chr1 1372516 . G . PASS END=1372516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr1 1372517 . A . LowGQ END=1372517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,643:14,0,255:18,0 chr1 1372518 . G . PASS END=1372518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 1372519 . G . PASS END=1372519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:18,0 chr1 1372520 . C . LowGQ END=1372520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,659:14,0,255:18,0 chr1 1372521 . T . PASS END=1372527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:19:0,21,659:0,21,255:19,0 chr1 1372528 . G . PASS END=1372528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 1372529 . A . PASS END=1372532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr1 1372533 . G . PASS END=1372533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 1372534 . G . PASS END=1372534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:18,0 chr1 1372535 . T . PASS END=1372535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 1372536 . G . PASS END=1372540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 1372541 . C . PASS END=1372542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:18,0 chr1 1372543 . T . PASS END=1372544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 1372545 . T . PASS END=1372545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:18,0 chr1 1372546 . G . PASS END=1372546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 1372547 . C . PASS END=1372548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:18,0 chr1 1372549 . C . PASS END=1372551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:19:0,21,604:0,21,255:16,0 chr1 1372552 . C . PASS END=1372578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,653:0,44,255:18,0 chr1 1372579 . G . PASS END=1372594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 1372595 . A . PASS END=1372605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:18,0 chr1 1372606 . T . PASS END=1372606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,627:0,18,255:16,0 chr1 1372607 . T . PASS END=1372627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:19,0 chr1 1372628 . G . PASS END=1372633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1372634 . G . PASS END=1372645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:20,0 chr1 1372646 . T . PASS END=1372647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1372648 . C . PASS END=1372664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,727:0,47,255:19,0 chr1 1372665 . T . PASS END=1372669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1372670 . G . PASS END=1372670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1372671 . C . PASS END=1372671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1372672 . T . PASS END=1372673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 1372674 . C . PASS END=1372686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:26,0 chr1 1372687 . G . PASS END=1372687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 1372688 . G . PASS END=1372689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 1372690 . C . PASS END=1372690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1372691 . C . PASS END=1372691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1372692 . C . PASS END=1372692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr1 1372693 . C . PASS END=1372728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr1 1372729 . T . PASS END=1372729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:23,0 chr1 1372730 . T . PASS END=1372753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 1372754 . A . PASS END=1372754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1372755 . C . PASS END=1372761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1372762 . G . PASS END=1372766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1372767 . G . PASS END=1372767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 1372768 . T . PASS END=1372824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr1 1372825 . C . PASS END=1372846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,35,255:13,0 chr1 1372847 . T . PASS END=1372847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 1372848 . G . PASS END=1372850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1372851 . G . PASS END=1372851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 1372852 . G . PASS END=1372852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 1372853 . G . PASS END=1372860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:12:0,22,360:0,22,255:9,0 chr1 1372861 . C . LowGQ END=1372861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:8,0 chr1 1372862 . T . PASS END=1372862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1372863 . C . PASS END=1372863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 1372864 . G . PASS END=1372864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1374461 . A . PASS END=1374489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 1374490 . A . PASS END=1374504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,717:0,60,255:22,0 chr1 1374505 . A . PASS END=1374505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 1374506 . G . PASS END=1374510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 1374511 . T . PASS END=1374511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 1374512 . T . PASS END=1374536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 1374537 . G . PASS END=1374538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1374539 . C . PASS END=1374543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 1374544 . G . PASS END=1374549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:18,0 chr1 1374550 . G . PASS END=1374553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:20:0,39,585:0,60,255:13,0 chr1 1374554 . A . PASS END=1374581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 1374582 . C . PASS END=1374582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1374583 . C . PASS END=1374586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1374587 . C . PASS END=1374590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1374591 . G . PASS END=1374610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 1374611 . T . PASS END=1374631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1374632 . G . PASS END=1374632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 1374633 . G . PASS END=1374633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1374634 . A . PASS END=1374634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1374635 . T . PASS END=1374647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 1374648 . C . PASS END=1374674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:18,0 chr1 1374675 . G . PASS END=1374675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 1374676 . C . PASS END=1374677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 1374678 . A . PASS END=1374678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr1 1374679 . G . PASS END=1374691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 1374692 . A . PASS END=1374696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1374697 . C . PASS END=1374715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:18,0 chr1 1374716 . T . PASS END=1374717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 1374718 . C . PASS END=1374718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1374719 . T . PASS END=1374727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 1374728 . G . PASS END=1374728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 1374729 . C . PASS END=1374742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 1374743 . A . PASS END=1374743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 1374744 . G . PASS END=1374744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 1374745 . G . PASS END=1374746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1374747 . A . PASS END=1374747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 1374748 . G . PASS END=1374748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1374749 . G . PASS END=1374749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 1374750 . G . PASS END=1374754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1374755 . G . PASS END=1374755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 1374756 . G . PASS END=1374758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 1374759 . T . PASS END=1374759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 1374760 . T . PASS END=1374766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 1374767 . C . PASS END=1374789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr1 1374790 . C . PASS END=1374796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 1374797 . A . PASS END=1374812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:12,0 chr1 1374813 . C . PASS END=1374833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:7:0,21,241:0,21,241:9,0 chr1 1374834 . A G, 50.00 PASS DP=6;MQ=250.00;MQRankSum=1.380;ReadPosRankSum=1.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,4,0:0.667,0.000:6:2,2,0:0,2,0:45:85,0,44,143,72,215:151,0,57:2,0:5.0000e+01,1.3047e-04,4.6981e+01,1.4307e+02,1.0630e+02,2.1760e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,2,2:0,2,2,2 chr1 1374835 . G . PASS END=1374836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 1374837 . G . PASS END=1374837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 1374838 . C . PASS END=1374843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 1374844 . G . PASS END=1374844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 1374845 . T . PASS END=1374845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 1374846 . C . PASS END=1374846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 1374847 . A . PASS END=1374848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr1 1374849 . C . PASS END=1374849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr1 1374850 . T . PASS END=1374850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 1374851 . C . PASS END=1374853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr1 1374854 . A . LowGQ END=1374854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:5,0 chr1 1374855 . C . PASS END=1374855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr1 1374856 . G . LowGQ END=1374856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:5,0 chr1 1374857 . C . PASS END=1374863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr1 1374864 . G . PASS END=1374871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:4:0,6,90:0,12,155:3,0 chr1 1374872 . T . LowGQ END=1374978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,16:3,0 chr1 1374979 . G . PASS END=1375028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:5,0 chr1 1375029 . G . LowGQ END=1375029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 1375030 . G . PASS END=1375072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 1375073 . T . LowGQ END=1375151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:2:0,0,0:0,6,55:3,0 chr1 1375152 . C . PASS END=1375167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 1386064 . A . PASS END=1386065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,892:0,69,255:25,0 chr1 1386066 . G . PASS END=1386138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:27:0,81,952:0,81,255:40,0 chr1 1387426 . C . PASS END=1387430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:24,0 chr1 1387431 . T . PASS END=1387431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,807:0,41,255:23,0 chr1 1387432 . G . PASS END=1387439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,893:0,72,255:25,0 chr1 1387440 . G . PASS END=1387443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr1 1387444 . T . PASS END=1387448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 1387449 . G . PASS END=1387453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1387454 . A . PASS END=1387454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 1387455 . G . PASS END=1387458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1387459 . G . PASS END=1387459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1387460 . A . PASS END=1387465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1387466 . T . PASS END=1387467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1387468 . C . PASS END=1387472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 1387473 . G . PASS END=1387496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,62,255:26,0 chr1 1387497 . C . PASS END=1387499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 1387500 . C . PASS END=1387500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:17,0 chr1 1387501 . A . PASS END=1387502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:18,0 chr1 1387745 . G . PASS END=1387814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:47:0,120,1800:0,120,255:40,0 chr1 1389725 . G . PASS END=1389731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 1389732 . G . PASS END=1389732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 1389733 . G . PASS END=1389743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1389744 . T . PASS END=1389748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 1389749 . G . PASS END=1389758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 1389759 . A . PASS END=1389761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1389762 . C . PASS END=1389762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr1 1389763 . A . PASS END=1389850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1072:0,87,255:36,0 chr1 1389851 . G . PASS END=1389880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr1 1390840 . C . PASS END=1390897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:32,0 chr1 1390898 . G . PASS END=1390898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 1390899 . T . PASS END=1390899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:29,0 chr1 1391171 . C . PASS END=1391174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 1391175 . G . PASS END=1391179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1391180 . G . PASS END=1391185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1391186 . C . PASS END=1391253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 1391254 . G . PASS END=1391254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1391255 . C . PASS END=1391260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1391261 . G . PASS END=1391278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 1391279 . A . PASS END=1391279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:11,0 chr1 1391280 . A . PASS END=1391296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,35,255:12,0 chr1 1391605 . A . PASS END=1391632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 1391633 . A . PASS END=1391641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 1391642 . T . LowGQ END=1391729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,70:0,0,70:3,0 chr1 1392509 . C . PASS END=1392517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 1392518 . C . PASS END=1392522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 1392523 . T . PASS END=1392527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 1392528 . G . PASS END=1392531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1392532 . C . PASS END=1392532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1392533 . G . PASS END=1392534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1392535 . A . PASS END=1392560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:26,0 chr1 1394541 . G . PASS END=1394562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,499:0,45,255:15,0 chr1 1394563 . G . PASS END=1394563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 1394564 . G . PASS END=1394588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 1394589 . C . PASS END=1394606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 1394607 . A . PASS END=1394607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 1394608 . A . PASS END=1394611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 1396130 . A . PASS END=1396132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 1396133 . C . PASS END=1396133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 1396134 . A . PASS END=1396144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 1396145 . G . PASS END=1396145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 1396146 . G . PASS END=1396160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 1396161 . G . PASS END=1396171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 1396172 . C . PASS END=1396172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 1396173 . T . PASS END=1396178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 1396179 . A . PASS END=1396188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1396189 . G . PASS END=1396200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,499:0,45,255:15,0 chr1 1396201 . T . PASS END=1396206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1396207 . A . PASS END=1396230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,443:0,39,255:13,0 chr1 1396231 . A . PASS END=1396231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 1396232 . G . PASS END=1396237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 1396238 . G T, 50.00 PASS DP=14;MQ=239.33;MQRankSum=1.333;ReadPosRankSum=1.467;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,9,0:0.643,0.000:14:1,3,0:4,6,0:47:85,0,47,322,178,500:255,0,152:3,0:5.0000e+01,8.2318e-05,5.0484e+01,3.2189e+02,2.1325e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,1,8:3,2,5,4 chr1 1396239 . C . PASS END=1396258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:12,0 chr1 1396259 . T . PASS END=1396259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1396260 . A . PASS END=1396267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1396268 . T . PASS END=1396275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 1396276 . A . PASS END=1396296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 1396297 . G . PASS END=1396297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr1 1397980 . G . PASS END=1397987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 1397988 . A . PASS END=1397989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1397990 . C . PASS END=1397990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 1397991 . T . PASS END=1397992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 1397993 . G . PASS END=1397997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 1397998 . G . PASS END=1398010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 1398011 . A . PASS END=1398011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 1398012 . G . PASS END=1398035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1054:0,87,255:29,0 chr1 1398036 . T . PASS END=1398037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 1398038 . A . PASS END=1398049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1398050 . T . PASS END=1398063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:27:0,74,1023:0,74,255:27,0 chr1 1398064 . C . PASS END=1398064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 1398065 . G . PASS END=1398079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr1 1398080 . T . PASS END=1398080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 1398081 . C . PASS END=1398088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 1403764 . G . PASS END=1403769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 1403770 . G . PASS END=1403782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 1403783 . A . PASS END=1403783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 1403784 . G . PASS END=1403790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:17,0 chr1 1403791 . G . PASS END=1403792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 1403793 . C . PASS END=1403793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 1403794 . C . PASS END=1403810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:22,0 chr1 1403811 . G . PASS END=1403811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 1403812 . G . PASS END=1403829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 1403830 . T . PASS END=1403830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 1403831 . T . PASS END=1403850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr1 1403851 . A . PASS END=1403851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 1403852 . T . PASS END=1403872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 1403873 . A . LowGQ END=1403873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,729:0,0,255:19,0 chr1 1403874 . G . PASS END=1403874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1403875 . A . PASS END=1403875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1403876 . G . PASS END=1403879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1403880 . T . PASS END=1403881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:20,0 chr1 1403882 . G . PASS END=1403882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1403883 . G . PASS END=1403883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 1403884 . C . PASS END=1403885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1403886 . C . PASS END=1403886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 1403887 . G . PASS END=1403890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 1403891 . A . PASS END=1403910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:19,0 chr1 1407265 . A . PASS END=1407315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:5,0 chr1 1407316 . C . LowGQ END=1407316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1407317 . C . PASS END=1407324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1407325 . C . LowGQ END=1407325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1407326 . C . PASS END=1407328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 1407329 . T . PASS END=1407334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 1407335 . C . LowGQ END=1407368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,45:0,0,72:3,0 chr1 1407369 . C . PASS END=1407371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1407372 . T C, 31.52 PASS DP=4;MQ=20.93;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,4,0:1.000,0.000:4:0,0,0:0,4,0:9:69,11,0,97,11,97:133,12,0:0,0:3.1517e+01,8.7868e+00,6.1970e-01,9.4685e+01,4.3557e+01,9.7685e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,4:0,0,4,0 chr1 1407373 . T . PASS END=1407390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1407391 . C . LowGQ END=1407397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:24,0,118:4,0 chr1 1407398 . A . PASS END=1407398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 1407399 . C . LowGQ END=1407401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 1407402 . A . PASS END=1407402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 1407403 . T . LowGQ END=1407405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,132:4,0 chr1 1407406 . A . PASS END=1407406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 1407407 . G . LowGQ END=1407414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,102:2,0,118:4,0 chr1 1407415 . G . PASS END=1407415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 1407416 . A . LowGQ END=1407418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,140:4,0 chr1 1407419 . C . PASS END=1407419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 1407420 . C . LowGQ END=1407421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:2,0,132:4,0 chr1 1407422 . C . PASS END=1407423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr1 1407424 . G . LowGQ END=1407426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 1407427 . C . PASS END=1407427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 1407428 . T . LowGQ END=1407428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr1 1407429 . G . PASS END=1407429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 1407430 . G . LowGQ END=1407431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 1407432 . G . PASS END=1407432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 1407433 . C . LowGQ END=1407433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1407434 . G . PASS END=1407434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1407435 . C . LowGQ END=1407435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,2:4:0:4:0,0,45:21,0,66:2,0 chr1 1407436 . G . PASS END=1407436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1407437 . C . LowGQ END=1407469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,1:3:0:3:0,0,0:0,0,30:3,0 chr1 1412654 . G . PASS END=1412655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 1412656 . T . PASS END=1412656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr1 1412657 . A . PASS END=1412730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:38:0,93,1374:0,93,255:40,0 chr1 1413880 . A . PASS END=1413887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr1 1413888 . G . PASS END=1413888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 1413889 . G . PASS END=1413910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr1 1413911 . C . PASS END=1413932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:23,0 chr1 1413933 . C . PASS END=1413943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1413944 . G . PASS END=1413945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1413946 . G . PASS END=1413947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 1413948 . T C, 43.19 PASS DP=21;MQ=77.99;MQRankSum=-2.064;ReadPosRankSum=1.340;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,8,0:0.381,0.000:21:3,4,0:10,4,0:42:78,0,47,278,465,743:239,0,255:12,0:4.3191e+01,2.5369e-04,4.9800e+01,2.7808e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,6,2:9,4,4,4 chr1 1413949 . G . PASS END=1413985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,676:0,49,255:19,0 chr1 1413986 . C . PASS END=1413991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:19,0 chr1 1413992 . A . PASS END=1413992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 1413993 . A . PASS END=1414021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr1 1414022 . A . PASS END=1414022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,603:0,38,255:15,0 chr1 1414023 . G . PASS END=1414044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 1414045 . C . PASS END=1414073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 1414074 . G . PASS END=1414081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1414082 . A . PASS END=1414082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 1414083 . G . PASS END=1414106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 1414107 . G . PASS END=1414110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1414111 . C T, 41.13 PASS DP=10;MQ=43.36;MQRankSum=0.851;ReadPosRankSum=2.450;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,5,0:0.500,0.000:10:3,2,0:2,3,0:39:76,0,41,179,171,350:164,0,156:4,0:4.1126e+01,5.1827e-04,4.3751e+01,1.7883e+02,2.0553e+02,3.5259e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,0,5:2,3,3,2 chr1 1414112 . G . PASS END=1414125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 1414429 . A . LowDepth END=1414488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 1416247 . C . PASS END=1416270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr1 1416271 . C . PASS END=1416276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1416277 . C . PASS END=1416286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 1416287 . C . PASS END=1416307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:9,0 chr1 1416308 . T . PASS END=1416308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 1416309 . G . PASS END=1416309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 1416310 . C . PASS END=1416316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,227:6,0 chr1 1417518 . C . PASS END=1417532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,868:0,61,255:26,0 chr1 1417533 . A . PASS END=1417534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1417535 . A . PASS END=1417535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:27,0 chr1 1417536 . T . PASS END=1417536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 1417537 . G . PASS END=1417537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 1417538 . G . PASS END=1417546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 1417547 . C . PASS END=1417547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 1417548 . A . PASS END=1417550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1417551 . A . PASS END=1417551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1417552 . G . PASS END=1417554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1417555 . T . PASS END=1417555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:26,0 chr1 1417556 . G . PASS END=1417559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 1417560 . T . PASS END=1417560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 1417561 . G . PASS END=1417561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1417562 . C . PASS END=1417562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 1417563 . T . PASS END=1417566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1417567 . A . PASS END=1417567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 1417568 . G . PASS END=1417603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1135:0,90,255:32,0 chr1 1417604 . C . PASS END=1417604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr1 1417605 . G . PASS END=1417614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1148:0,93,255:31,0 chr1 1417615 . A . PASS END=1417615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 1417616 . G . PASS END=1417619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:28,0 chr1 1417620 . T . PASS END=1417620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1417621 . C . PASS END=1417625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1417626 . G . PASS END=1417636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 1417637 . C . PASS END=1417644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1139:0,87,255:30,0 chr1 1417645 . G . PASS END=1417645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr1 1417646 . G . PASS END=1417654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1417655 . C . PASS END=1417658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1078:0,74,255:26,0 chr1 1417659 . G . PASS END=1417679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:25,0 chr1 1417680 . T . PASS END=1417683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr1 1417925 . G . PASS END=1417930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:24,0 chr1 1417931 . T . PASS END=1417931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 1417932 . G . PASS END=1417948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:24,0 chr1 1417949 . A . PASS END=1417949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 1417950 . G . PASS END=1417952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:24:0,64,915:0,64,255:25,0 chr1 1417953 . T . PASS END=1417953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1417954 . T . PASS END=1417954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 1417955 . C . PASS END=1417958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 1417959 . G . PASS END=1417966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 1417967 . G . PASS END=1417992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 1417993 . C . PASS END=1417993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1417994 . G . PASS END=1417994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:18,0 chr1 1420396 . G . PASS END=1420412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 1420413 . G . PASS END=1420413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 1420414 . C . PASS END=1420432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr1 1420433 . C . PASS END=1420438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1420439 . A . PASS END=1420439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1420440 . G . PASS END=1420448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,876:0,63,255:23,0 chr1 1420449 . A . PASS END=1420449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 1420450 . G . PASS END=1420450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1420451 . C . PASS END=1420451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:22,0 chr1 1420452 . C . PASS END=1420473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,945:0,62,255:26,0 chr1 1420474 . G . PASS END=1420485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1420486 . A . PASS END=1420487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1420488 . G . PASS END=1420488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1420489 . C . PASS END=1420504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 1420505 . A . PASS END=1420505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 1420506 . G . PASS END=1420514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 1420515 . C . PASS END=1420515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 1420516 . A . PASS END=1420521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 1420522 . G . PASS END=1420523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1420524 . G . PASS END=1420532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1420533 . G . PASS END=1420551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,706:0,57,255:19,0 chr1 1421162 . G . PASS END=1421218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:98:50:0,98,1800:0,98,255:40,0 chr1 1421490 . C . PASS END=1421493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1421494 . G . PASS END=1421530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,900:0,61,255:25,0 chr1 1421531 . C A, 125.25 PASS DP=26;MQ=158.30;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,16,0:0,10,0:75:163,78,0,992,78,992:255,78,0:0,0:1.2525e+02,7.5248e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,9:0,0,9,17 chr1 1421532 . A . PASS END=1421561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 1421562 . A . PASS END=1421568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,69,255:19,0 chr1 1421569 . T . PASS END=1421575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,56,255:19,0 chr1 1421576 . G . PASS END=1421577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1421578 . A . PASS END=1421578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 1421579 . T . PASS END=1421581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1421582 . G . PASS END=1421613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 1421614 . A . PASS END=1421614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr1 1421615 . G . PASS END=1421615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1421924 . A . PASS END=1421944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:22,0 chr1 1421945 . A . PASS END=1421945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 1421946 . T . PASS END=1421953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,620:0,65,255:22,0 chr1 1421954 . G . PASS END=1421960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1421961 . T . PASS END=1421962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 1421963 . A . PASS END=1421964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1421965 . A . PASS END=1421982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,50,255:19,0 chr1 1421983 . C . PASS END=1421990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,41,255:13,0 chr1 1421991 . G A, 70.77 PASS DP=19;MQ=53.03;MQRankSum=1.187;ReadPosRankSum=0.274;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,18,0:0.947,0.000:19:1,9,0:0,9,0:27:109,30,0,643,65,679:255,18,0:1,0:7.0774e+01,2.6649e+01,9.4057e-03,4.5000e+02,9.7180e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,7,11:1,0,12,6 chr1 1421992 . G . PASS END=1421994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 1421995 . A . PASS END=1421995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1421996 . G . PASS END=1422025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,402:0,33,255:13,0 chr1 1422026 . T . PASS END=1422028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 1422029 . G . PASS END=1422034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 1422035 . A . PASS END=1422035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:8,0 chr1 1422036 . C . PASS END=1422044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 1422045 . G . PASS END=1422048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 1423243 . C . PASS END=1423266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1063:0,84,255:32,0 chr1 1423267 . A G, 146.32 PASS DP=33;MQ=176.10;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,17,0:0,16,0:96:184,99,0,1279,99,1279:255,99,0:0,0:1.4632e+02,9.6321e+01,0.0000e+00,4.5000e+02,1.3109e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,11:0,0,18,15 chr1 1423268 . G . PASS END=1423294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1149:0,93,255:32,0 chr1 1424584 . G . PASS END=1424654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:36:0,94,1313:0,94,255:40,0 chr1 1425072 . C . PASS END=1425084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:24,0 chr1 1425085 . T . PASS END=1425085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 1425086 . C . PASS END=1425088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 1425089 . A . PASS END=1425089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 1425090 . C . PASS END=1425103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:25,0 chr1 1425104 . C . PASS END=1425104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 1425105 . T . PASS END=1425109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,915:0,75,255:25,0 chr1 1425110 . G . PASS END=1425115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 1425116 . C . PASS END=1425121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,59,255:20,0 chr1 1425122 . T . PASS END=1425123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 1425124 . A . PASS END=1425124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 1425125 . C . PASS END=1425126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1425127 . C . PASS END=1425129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 1425130 . C . PASS END=1425130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1425131 . A . PASS END=1425146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 1425147 . T C, 42.64 PASS DP=21;MQ=157.17;MQRankSum=-2.425;ReadPosRankSum=2.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,7,0:0.333,0.000:21:7,3,0:7,4,0:42:77,0,50,213,472,685:178,0,255:13,0:4.2636e+01,2.5835e-04,5.3000e+01,2.1345e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,3,4:8,6,3,4 chr1 1425148 . G . PASS END=1425184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 1425185 . G . PASS END=1425186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1425637 . A . PASS END=1425640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 1425641 . A . PASS END=1425641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 1425642 . T . PASS END=1425662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 1425663 . T . PASS END=1425672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 1425673 . G . PASS END=1425687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr1 1425688 . C . PASS END=1425696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 1425697 . C . PASS END=1425698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1425699 . T . PASS END=1425699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 1425700 . T C, 92.14 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,8,0:0,7,0:42:130,45,0,574,45,574:255,45,0:0,0:9.2143e+01,4.2143e+01,2.6508e-04,4.5000e+02,7.6913e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,5:0,0,3,12 chr1 1425701 . G . PASS END=1425701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1425702 . A . PASS END=1425704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1425705 . T . PASS END=1425705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 1425706 . G . PASS END=1425730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr1 1425731 . C . PASS END=1425731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1425732 . A . PASS END=1425737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1425738 . A . PASS END=1425749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1425750 . T . PASS END=1425756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 1425757 . A . PASS END=1425757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 1425758 . C . PASS END=1425778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,523:0,45,255:16,0 chr1 1425779 . C . PASS END=1425779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 1425780 . T . PASS END=1425804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 1425943 . G . PASS END=1425966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,713:0,57,255:19,0 chr1 1425967 . C . PASS END=1425973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 1425974 . A . PASS END=1425992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 1425993 . C . PASS END=1425993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 1425994 . T . PASS END=1426020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 1426021 . G . PASS END=1426040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 1426041 . T . PASS END=1426044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:9,0 chr1 1426045 . C . PASS END=1426051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 1430865 . G . PASS END=1430870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 1430871 . G . PASS END=1430884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 1430885 . G . PASS END=1430947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:14:0,40,520:0,40,255:19,0 chr1 1430948 . A . PASS END=1430954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 1430955 . A . PASS END=1430955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 1430956 . T . PASS END=1430959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1430960 . C . PASS END=1430961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,488:0,26,255:13,0 chr1 1430962 . G . PASS END=1430984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 1430985 . C T, 49.79 PASS DP=15;MQ=249.41;MQRankSum=2.257;ReadPosRankSum=-0.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:4,2,0:4,5,0:48:85,0,50,221,278,500:204,0,249:8,0:4.9794e+01,6.7304e-05,5.3000e+01,2.2147e+02,3.1293e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,4,3:4,4,3,4 chr1 1430986 . G . PASS END=1430991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 1430992 . T . PASS END=1430998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 1430999 . C . PASS END=1431009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1431010 . G . PASS END=1431011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 1431012 . G . PASS END=1431016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 1431017 . A . PASS END=1431022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 1431023 . G . PASS END=1431024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1431025 . C . PASS END=1431028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:14,0 chr1 1431029 . C . PASS END=1431029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1431030 . A . PASS END=1431030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1431031 . C . PASS END=1431034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1431035 . A . PASS END=1431035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr1 1431036 . T . PASS END=1431036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,398:0,11,255:13,0 chr1 1431037 . G . PASS END=1431041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1431042 . C . PASS END=1431042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 1431043 . T . PASS END=1431050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 1431051 . G . PASS END=1431055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 1431056 . C . PASS END=1431061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 1431062 . C . PASS END=1431127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,513:0,45,255:18,0 chr1 1431128 . G . PASS END=1431132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 1431133 . T . PASS END=1431133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr1 1431134 . G . PASS END=1431145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 1431146 . G . PASS END=1431146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1431147 . T . PASS END=1431147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,639:0,32,255:19,0 chr1 1431148 . C . PASS END=1431149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 1431150 . T . PASS END=1431160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1431161 . T . PASS END=1431163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1431164 . G . PASS END=1431164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1431165 . C T, 0.04 DRAGENSnpHardQUAL DP=21;MQ=105.50;MQRankSum=-0.419;ReadPosRankSum=0.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:19,2,0:0.095,0.000:21:5,2,0:14,0,0:20:15,0,49,72,635,706:14,0,255:18,0:4.3656e-02,1.9999e+01,7.1949e+01,9.1526e+01,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,1,1:9,10,1,1 chr1 1431166 . C . PASS END=1431171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1431172 . G . PASS END=1431172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 1431173 . C . PASS END=1431173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1431174 . C . PASS END=1431175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1431176 . C . PASS END=1431180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1431181 . G . PASS END=1431181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 1431182 . G . PASS END=1431182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1431183 . C . PASS END=1431183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 1431184 . A . PASS END=1431186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1431187 . C . PASS END=1431197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:19,0 chr1 1444585 . G . PASS END=1444599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 1444600 . T . PASS END=1444600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 1444601 . C . PASS END=1444630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:70:24:0,70,900:0,70,255:27,0 chr1 1444631 . T . PASS END=1444646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 1444647 . A . PASS END=1444669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,70,255:26,0 chr1 1444670 . A . PASS END=1444670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 1444671 . G . PASS END=1444672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1444673 . T . PASS END=1444673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr1 1444674 . G . PASS END=1444680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,829:0,66,255:22,0 chr1 1444681 . T . PASS END=1444685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1444686 . G . PASS END=1444686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr1 1444687 . A . PASS END=1444689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1444690 . A . PASS END=1444695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 1444696 . A . PASS END=1444717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 1444718 . A . PASS END=1444728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:35:17:0,35,540:0,35,255:13,0 chr1 1444729 . T . PASS END=1444731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1447649 . A . LowDepth;LowGQ END=1447693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr1 1447694 . G . LowDepth;LowGQ END=1447853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1451392 . G . PASS END=1451417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,111,1708:0,111,255:40,0 chr1 1451418 . G . PASS END=1451468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,130,255:40,0 chr1 1452547 . A . PASS END=1452558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,333:0,27,255:9,0 chr1 1452559 . G . PASS END=1452576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,398:0,33,255:13,0 chr1 1452577 . A G, 50.00 PASS DP=17;MQ=151.57;MQRankSum=-0.818;ReadPosRankSum=0.337;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:4,5,0:4,4,0:48:85,0,50,293,281,573:255,0,237:6,0:5.0000e+01,6.5492e-05,5.2924e+01,2.9260e+02,3.1559e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,7,2:6,2,5,4 chr1 1452578 . C . PASS END=1452585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 1452586 . T . PASS END=1452587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,585:0,35,255:13,0 chr1 1452588 . G . PASS END=1452607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 1452608 . C . PASS END=1452608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:18,0 chr1 1452609 . C . PASS END=1452613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1452614 . C . PASS END=1452614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1452615 . C . PASS END=1452646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,668:0,44,255:19,0 chr1 1452647 . C . PASS END=1452654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 1452655 . G . PASS END=1452667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1452668 . C . PASS END=1452672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1452673 . G . PASS END=1452682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 1452683 . C . PASS END=1452683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 1452684 . T . PASS END=1452699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 1452700 . G . PASS END=1452700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 1452701 . C . PASS END=1452703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1452704 . C . PASS END=1452709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1452710 . A . PASS END=1452710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1452711 . G . PASS END=1452717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 1452718 . A . PASS END=1452731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 1452732 . C . PASS END=1452743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:6:0,12,180:0,18,225:5,0 chr1 1452744 . T . LowGQ END=1452792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,45:0,0,78:3,0 chr1 1453096 . A . PASS END=1453098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1453099 . G . PASS END=1453104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 1453105 . T . PASS END=1453105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 1453106 . A . PASS END=1453109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 1453110 . A . PASS END=1453110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:15,0 chr1 1453111 . G . PASS END=1453137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:19,0 chr1 1453138 . G . PASS END=1453142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 1453143 . A . PASS END=1453143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:20,0 chr1 1453144 . C . PASS END=1453155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 1454301 . C . PASS END=1454320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:32:0,82,998:0,82,255:34,0 chr1 1454321 . T . PASS END=1454321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1034:0,69,255:31,0 chr1 1454322 . T . PASS END=1454366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,101,255:39,0 chr1 1454367 . C . PASS END=1454369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 1454370 . G . PASS END=1454370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 1454872 . T . LowDepth;LowGQ END=1454891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr1 1455521 . C . PASS END=1455554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 1455555 . G . PASS END=1455569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1455570 . A . PASS END=1455570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:26,0 chr1 1455571 . G . PASS END=1455638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1215:0,84,255:40,0 chr1 1455639 . C . PASS END=1455640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1164:0,60,255:31,0 chr1 1455641 . G . PASS END=1455651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1157:0,82,255:32,0 chr1 1455652 . G . PASS END=1455652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:19:32:0,19,1086:0,19,255:29,0 chr1 1455653 . C . PASS END=1455668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:32,0 chr1 1455669 . C . PASS END=1455669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 1455670 . G . PASS END=1455676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 1455677 . A . PASS END=1455686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 1455928 . G . PASS END=1455939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,157,255:40,0 chr1 1455940 . C . PASS END=1455976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,157,255:40,0 chr1 1455977 . T C, 0.08 DRAGENSnpHardQUAL DP=66;MQ=75.00;MQRankSum=-5.016;ReadPosRankSum=3.121;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:56,10,0:0.152,0.000:66:21,4,0:35,6,0:18:17,0,46,358,1979,2337:206,0,255:40,0:7.6204e-02,1.7596e+01,6.6696e+01,3.7536e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,29,2,8:32,24,4,6 chr1 1455978 . G . PASS END=1455997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,160,255:40,0 chr1 1458124 . G . PASS END=1458133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,674:0,51,255:18,0 chr1 1458134 . T . PASS END=1458134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 1458135 . G . PASS END=1458138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,684:0,54,255:19,0 chr1 1458139 . C . PASS END=1458165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:24,0 chr1 1458166 . A . PASS END=1458166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 1458167 . A . PASS END=1458180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,961:0,69,255:26,0 chr1 1458181 . G . LowGQ END=1458181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,814:5,0,255:22,0 chr1 1458182 . T . PASS END=1458193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:24,0 chr1 1458194 . T . PASS END=1458194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 1458195 . C . PASS END=1458217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:26,0 chr1 1458218 . C . PASS END=1458223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 1458224 . T . PASS END=1458225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 1458226 . G . PASS END=1458228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1458229 . A . PASS END=1458249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 1458250 . G . PASS END=1458252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1458253 . C . PASS END=1458270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1458271 . C . PASS END=1458273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 1458274 . A . PASS END=1458277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1458278 . A . PASS END=1458279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 1458891 . G . PASS END=1458947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:52:0,99,1485:0,129,255:40,0 chr1 1459219 . C . PASS END=1459220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 1459221 . C . PASS END=1459221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 1459222 . A . PASS END=1459225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:30,0 chr1 1459226 . T . PASS END=1459226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1008:0,46,255:27,0 chr1 1459227 . G . PASS END=1459310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,89,255:38,0 chr1 1459311 . G . PASS END=1459321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1035:0,71,255:25,0 chr1 1459322 . C . PASS END=1459322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:22,0 chr1 1459323 . C . PASS END=1459328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 1459329 . G . PASS END=1459332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1459333 . C . PASS END=1459344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1000:0,68,255:26,0 chr1 1459653 . A . PASS END=1459653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 1459654 . A . PASS END=1459654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 1459655 . A . PASS END=1459661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 1459662 . C . PASS END=1459666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 1459667 . C . PASS END=1459667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 1459668 . T . PASS END=1459706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,645:0,44,255:19,0 chr1 1459707 . G . PASS END=1459707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1459708 . C . PASS END=1459729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 1459730 . G . PASS END=1459746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 1459747 . T . PASS END=1459747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:9,0 chr1 1459748 . C . PASS END=1459754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 1459755 . T . PASS END=1459761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 1459762 . A . PASS END=1459762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:6,0 chr1 1459763 . T . PASS END=1459765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 1459766 . C . PASS END=1459766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 1459767 . A . PASS END=1459773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 1459774 . G . PASS END=1459775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:4,0 chr1 1459776 . G . PASS END=1459777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:9:9:0,9,135:0,27,255:3,0 chr1 1460620 . C . PASS END=1460629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1144:0,83,255:35,0 chr1 1460630 . T . PASS END=1460630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1000:0,71,255:33,0 chr1 1460631 . T . PASS END=1460649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1203:0,88,255:35,0 chr1 1460650 . C . PASS END=1460650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1107:0,74,255:33,0 chr1 1460651 . T . PASS END=1460665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1231:0,86,255:34,0 chr1 1460666 . G . PASS END=1460666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 1460667 . C . PASS END=1460670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1460671 . C . PASS END=1460671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 1461841 . G . PASS END=1461906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,786:0,66,255:23,0 chr1 1461907 . A . PASS END=1461908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1461909 . C . PASS END=1461911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1462541 . C . PASS END=1462606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1003:0,80,255:33,0 chr1 1462607 . T . PASS END=1462607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1156:0,68,255:31,0 chr1 1462608 . T . PASS END=1462626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 1462627 . C . PASS END=1462632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1072:0,76,255:26,0 chr1 1462633 . G . PASS END=1462635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1462636 . G . PASS END=1462636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 1462637 . A . PASS END=1462637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1462638 . T . PASS END=1462655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,939:0,75,255:25,0 chr1 1463075 . G . PASS END=1463099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,272:0,24,255:9,0 chr1 1463100 . C . PASS END=1463100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 1463101 . A . PASS END=1463110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 1463111 . G . PASS END=1463119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:17,0 chr1 1463120 . G . PASS END=1463120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1463121 . G . PASS END=1463135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:19,0 chr1 1463136 . A . PASS END=1463141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 1463142 . G . PASS END=1463218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,612:0,41,255:19,0 chr1 1463219 . T . PASS END=1463219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 1463220 . A . PASS END=1463238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:16,0 chr1 1463239 . A . PASS END=1463241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:13,0 chr1 1463242 . A . PASS END=1463242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:16:0,24,360:0,48,255:8,0 chr1 1464603 . G . PASS END=1464603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 1464604 . C . PASS END=1464604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 1464605 . G . PASS END=1464609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 1464610 . A . PASS END=1464611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 1464612 . G . PASS END=1464612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1464613 . C . PASS END=1464613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 1464614 . T . PASS END=1464647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1157:0,87,255:31,0 chr1 1464648 . G . PASS END=1464649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1464650 . T . PASS END=1464653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 1464654 . T . PASS END=1464682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,63,255:26,0 chr1 1464683 . A . PASS END=1464683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:21,0 chr1 1464684 . G . PASS END=1464697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:25,0 chr1 1464698 . C . PASS END=1464699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1464700 . G . PASS END=1464711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1031:0,71,255:26,0 chr1 1469306 . G . PASS END=1469321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:19,0 chr1 1469322 . C . PASS END=1469326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:22,0 chr1 1469327 . G . PASS END=1469332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 1469333 . G . PASS END=1469333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 1469334 . T . PASS END=1469336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 1469337 . T . PASS END=1469337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 1469338 . G . PASS END=1469355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,862:0,62,255:26,0 chr1 1469356 . C . PASS END=1469360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 1469361 . G . PASS END=1469361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 1469362 . C . PASS END=1469366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:29,0 chr1 1469367 . A . PASS END=1469367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 1469368 . A . PASS END=1469377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,973:0,84,255:29,0 chr1 1469378 . C . PASS END=1469378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 1469379 . A . PASS END=1469386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1469387 . C . PASS END=1469387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 1469388 . A . PASS END=1469415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:28,0 chr1 1469416 . A . PASS END=1469436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:23,0 chr1 1469437 . G . PASS END=1469452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:18,0 chr1 1470739 . T . PASS END=1470741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 1470742 . C . PASS END=1470742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 1470743 . A . PASS END=1470751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,848:0,62,255:26,0 chr1 1470752 . G . PASS END=1470761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 1470762 . G . PASS END=1470762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1470763 . G . PASS END=1470764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 1470765 . C . PASS END=1470765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:27,0 chr1 1470766 . A . PASS END=1470767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,995:0,84,255:28,0 chr1 1470768 . T . PASS END=1470768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr1 1470769 . G . PASS END=1470770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1470771 . G . PASS END=1470772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 1470773 . T . PASS END=1470781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1470782 . T . PASS END=1470782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 1470783 . G . PASS END=1470792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr1 1470793 . T . PASS END=1470793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1062:0,66,255:30,0 chr1 1470794 . A . PASS END=1470812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1096:0,80,255:32,0 chr1 1470813 . C . PASS END=1470813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 1470814 . C . PASS END=1470818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1470819 . A . PASS END=1470822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:30:0,72,1080:0,80,255:26,0 chr1 1470823 . C . PASS END=1470823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1470824 . C . PASS END=1470839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr1 1470840 . C . PASS END=1470857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,50,255:19,0 chr1 1470858 . A . PASS END=1470858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 1470859 . C . PASS END=1470859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:11,0 chr1 1470860 . A . PASS END=1470861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 1470862 . C . PASS END=1470880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 1470881 . G . PASS END=1470887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1470969 . C . PASS END=1470990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr1 1470991 . G . PASS END=1470991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1470992 . G . PASS END=1470992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 1470993 . C . PASS END=1470997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 1470998 . A . PASS END=1470998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr1 1470999 . C . PASS END=1471000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1471001 . G . PASS END=1471002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1471003 . G . PASS END=1471003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1471004 . C . PASS END=1471004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1471005 . A . PASS END=1471005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 1471006 . G . PASS END=1471023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1296:0,89,255:35,0 chr1 1471024 . C . PASS END=1471024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:34,0 chr1 1471025 . C . PASS END=1471037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:35:0,95,1327:0,95,255:38,0 chr1 1471038 . A . PASS END=1471038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 1471039 . G . PASS END=1471115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:39:0,82,1312:0,82,255:40,0 chr1 1471116 . T . PASS END=1471116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1344:0,79,255:37,0 chr1 1471117 . C . PASS END=1471142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1440:0,104,255:40,0 chr1 1471143 . C . PASS END=1471143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr1 1471144 . C . PASS END=1471152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,102,255:32,0 chr1 1471153 . C . PASS END=1471174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:26,0 chr1 1471175 . T . PASS END=1471177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 1475060 . T . PASS END=1475083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1172:0,83,255:36,0 chr1 1475084 . G . PASS END=1475084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:35,0 chr1 1475085 . A . PASS END=1475111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:35,0 chr1 1475112 . A . PASS END=1475112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:29,0 chr1 1475113 . G . PASS END=1475117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:34:0,89,1233:0,89,255:32,0 chr1 1475118 . T . PASS END=1475118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:30,0 chr1 1475119 . A . PASS END=1475123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1224:0,83,255:33,0 chr1 1475124 . T . PASS END=1475124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr1 1475125 . G . PASS END=1475127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1263:0,86,255:33,0 chr1 1475128 . A . PASS END=1475129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1210:0,64,255:30,0 chr1 1475130 . C . PASS END=1475135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:31,0 chr1 1475136 . A . PASS END=1475136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:29,0 chr1 1475137 . G . PASS END=1475144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:29,0 chr1 1475145 . T . PASS END=1475145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 1475146 . T . PASS END=1475147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1475148 . A . PASS END=1475148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,955:0,43,255:25,0 chr1 1475149 . T . PASS END=1475149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 1475150 . G . PASS END=1475152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 1475153 . C . PASS END=1475155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 1475156 . C . PASS END=1475156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1475157 . A . PASS END=1475157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:27,0 chr1 1475158 . A . PASS END=1475160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1475161 . A . PASS END=1475162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 1475163 . G . PASS END=1475166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 1475167 . T . PASS END=1475170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 1475670 . C . PASS END=1475673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 1475674 . A . PASS END=1475686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,947:0,65,255:26,0 chr1 1475687 . C . PASS END=1475687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 1475688 . C . PASS END=1475706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,939:0,64,255:26,0 chr1 1475707 . G . PASS END=1475707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr1 1475708 . T . PASS END=1475709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1475710 . T . PASS END=1475710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 1475711 . T . PASS END=1475712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 1475713 . G . PASS END=1475726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,49,255:18,0 chr1 1477446 . T . PASS END=1477451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:18,0 chr1 1477452 . G . PASS END=1477453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 1477454 . A . PASS END=1477454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1477455 . G . PASS END=1477465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,808:0,63,255:25,0 chr1 1477466 . G . PASS END=1477471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 1477472 . A . PASS END=1477472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:26,0 chr1 1477473 . G . PASS END=1477495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:29,0 chr1 1477496 . A . PASS END=1477496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 1477497 . C . PASS END=1477519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 1477520 . C . PASS END=1477532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr1 1477533 . T . PASS END=1477533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 1477534 . T . PASS END=1477547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 1479249 . A . PASS END=1479254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1017:0,84,255:31,0 chr1 1479255 . G . PASS END=1479255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr1 1479256 . C . PASS END=1479256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1225:0,96,255:32,0 chr1 1479257 . A . PASS END=1479257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr1 1479258 . G . PASS END=1479343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1196:0,86,255:38,0 chr1 1479344 . T . PASS END=1479344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1479345 . C . PASS END=1479351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1035:0,87,255:29,0 chr1 1479352 . T . PASS END=1479352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 1479353 . C . PASS END=1479366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 1479367 . T . PASS END=1479367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 1480243 . C . PASS END=1480382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:38:0,84,1260:0,96,255:40,0 chr1 1499915 . T . PASS END=1499921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 1499922 . G . PASS END=1499923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1499924 . A . PASS END=1499933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,714:0,51,255:19,0 chr1 1499934 . G . PASS END=1499950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 1499951 . C . PASS END=1499951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 1499952 . A . PASS END=1499965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,847:0,69,255:23,0 chr1 1499966 . G . PASS END=1499967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1499968 . G . PASS END=1499971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1499972 . C . PASS END=1499981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:30,0 chr1 1499982 . A . PASS END=1499982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 1499983 . A . PASS END=1499983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:29,0 chr1 1499984 . C . PASS END=1499985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 1499986 . C . PASS END=1499986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 1499987 . G . PASS END=1500043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1103:0,90,255:37,0 chr1 1500044 . C . PASS END=1500044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr1 1500045 . C . PASS END=1500166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1119:0,82,255:40,0 chr1 1500167 . C . PASS END=1500167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:29,0 chr1 1500168 . C . PASS END=1500236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1136:0,81,255:37,0 chr1 1500237 . G . PASS END=1500237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 1500238 . G . PASS END=1500245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1027:0,87,255:29,0 chr1 1500246 . A . PASS END=1500289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,762:0,63,255:26,0 chr1 1500290 . C . PASS END=1500291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 1500292 . G . PASS END=1500296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1509858 . C . PASS END=1509886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,929:0,62,255:26,0 chr1 1509887 . G . PASS END=1509887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1509888 . T . PASS END=1509888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 1509889 . T . PASS END=1509894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 1509895 . T . PASS END=1509917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:26,0 chr1 1509918 . C . PASS END=1509918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 1509919 . G . PASS END=1509919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,728:0,19,255:19,0 chr1 1509920 . C . PASS END=1509920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 1509921 . A . PASS END=1509926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1509927 . G . PASS END=1509927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 1509928 . A . PASS END=1509928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1509929 . C . PASS END=1509931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 1509932 . C . PASS END=1509932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:16,0 chr1 1509933 . G . PASS END=1509935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:18,0 chr1 1509936 . A . PASS END=1509936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:16,0 chr1 1509937 . T . PASS END=1509937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 1534715 . T . PASS END=1534719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 1534720 . G . PASS END=1534720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1534721 . G . PASS END=1534725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,631:0,51,255:19,0 chr1 1534726 . T . PASS END=1534726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 1534727 . G . PASS END=1534731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 1534732 . G . PASS END=1534743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:25,0 chr1 1534744 . C . PASS END=1534744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 1534745 . G . PASS END=1534759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr1 1534760 . G . PASS END=1534760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 1534761 . A . PASS END=1534767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:25,0 chr1 1534768 . C . PASS END=1534768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr1 1534769 . G . PASS END=1534771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1534772 . G . PASS END=1534774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 1534775 . G . PASS END=1534778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 1534779 . G . PASS END=1534779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1534780 . C . PASS END=1534785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 1534786 . G . PASS END=1534786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1534787 . C . PASS END=1534787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 1534788 . A . PASS END=1534796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 1534797 . A . PASS END=1534850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 1534851 . T . PASS END=1534851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1534852 . C . PASS END=1534859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr1 1534860 . C . PASS END=1534894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,630:0,41,255:19,0 chr1 1534895 . C . PASS END=1534895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 1534896 . G . PASS END=1534896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 1534897 . G . PASS END=1534909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 1534910 . T . PASS END=1534917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 1534918 . C . PASS END=1534918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 1534919 . G . PASS END=1534922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1534923 . G . PASS END=1534924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 1534925 . G . PASS END=1534951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 1534952 . C . PASS END=1534952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 1534953 . A . PASS END=1534958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 1534959 . A . PASS END=1534959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 1534960 . G . PASS END=1534970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 1534971 . A . LowGQ END=1534971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:6,0 chr1 1534972 . C . PASS END=1534972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 1534973 . G . PASS END=1534983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,249:5,0 chr1 1534984 . C . PASS END=1534984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 1534985 . G . PASS END=1535046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 1535047 . T . LowGQ END=1535047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr1 1535048 . G . PASS END=1535055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1535056 . C . LowGQ END=1535063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,100:0,0,104:3,0 chr1 1535064 . G . PASS END=1535064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 1535065 . A . LowGQ END=1535146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,31:3,0 chr1 1535147 . G . LowDepth;LowGQ END=1535395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1550840 . A . PASS END=1550841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 1550842 . G . PASS END=1550843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:30,0 chr1 1550844 . C . PASS END=1550844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 1550845 . G . PASS END=1550853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 1550854 . C . PASS END=1550854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 1550855 . C . PASS END=1550855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr1 1550856 . G . PASS END=1550875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 1550876 . T . PASS END=1550876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 1550877 . C . PASS END=1550877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 1550878 . C . PASS END=1550879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 1550880 . G . PASS END=1550914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1166:0,80,255:34,0 chr1 1550915 . C . PASS END=1550915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:32,0 chr1 1550916 . C . PASS END=1550919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:35,0 chr1 1550920 . G . PASS END=1550920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:31,0 chr1 1550921 . T . PASS END=1550933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1211:0,88,255:32,0 chr1 1550934 . A . PASS END=1550948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:25:0,67,978:0,67,255:25,0 chr1 1550949 . C . PASS END=1550949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 1550950 . C . PASS END=1550951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1550952 . G . PASS END=1550952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 1550953 . A . PASS END=1550978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,62,255:22,0 chr1 1550979 . C . PASS END=1551014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,692:0,44,255:19,0 chr1 1551015 . T . PASS END=1551020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,743:0,60,255:20,0 chr1 1551021 . C . PASS END=1551021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1551022 . G . PASS END=1551030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 1551031 . T . PASS END=1551031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr1 1551032 . C . PASS END=1551033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1551034 . C . PASS END=1551055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,44,255:19,0 chr1 1551056 . T . PASS END=1551074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1551075 . T . PASS END=1551075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 1551076 . C . PASS END=1551086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 1551087 . C . PASS END=1551104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 1551105 . C . PASS END=1551115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1551116 . G . PASS END=1551118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 1551119 . C . PASS END=1551119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1551120 . A . PASS END=1551132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 1551133 . T . LowGQ END=1551133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,332:52,0,255:10,0 chr1 1551134 . G . PASS END=1551134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 1551135 . G . LowGQ END=1551136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:10,0 chr1 1551137 . C . PASS END=1551137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 1551138 . T . LowGQ END=1551140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:8,0 chr1 1551141 . G . PASS END=1551142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 1551143 . G . LowGQ END=1551143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:6,0 chr1 1551144 . T . PASS END=1551144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 1551145 . A . LowGQ END=1551147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,304:6,0,255:6,0 chr1 1551148 . G . PASS END=1551148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 1551149 . T . LowGQ END=1551150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr1 1551151 . C . PASS END=1551151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 1551152 . G . PASS END=1551153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 1551154 . A . LowGQ END=1551155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr1 1551156 . G . PASS END=1551156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 1551157 . G . LowGQ END=1551157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,255:12,0,255:5,0 chr1 1551158 . G . PASS END=1551158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 1551159 . A . LowGQ END=1551193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,0:4:0:4:0,0,0:0,0,27:5,0 chr1 1551194 . G . PASS END=1551210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr1 1551211 . G . PASS END=1551211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 1551212 . T . PASS END=1551225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 1551226 . C . PASS END=1551248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,180:0,18,180:6,0 chr1 1551249 . C T, 62.31 PASS DP=5;MQ=220.02;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:100,15,0,194,15,194:233,18,0:0,0:6.2312e+01,1.2312e+01,2.6294e-01,1.9083e+02,4.7082e+01,1.9383e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,3:0,0,1,4 chr1 1551250 . T . PASS END=1551252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 1551253 . C . PASS END=1551286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 1551287 . T . PASS END=1551304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,94:3,0 chr1 1551305 . C . PASS END=1551305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 1551306 . G . PASS END=1551306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 1551307 . G . PASS END=1551335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 1551336 . G . PASS END=1551353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 1551354 . C . PASS END=1551354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 1551355 . T . PASS END=1551360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 1551361 . G . PASS END=1551371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr1 1551372 . T . PASS END=1551372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 1551373 . G . PASS END=1551390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr1 1551391 . G . PASS END=1551424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 1551425 . G . PASS END=1551425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 1551426 . C . PASS END=1551427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 1551428 . C T, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.843;ReadPosRankSum=1.813;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,6,0:0.500,0.000:12:2,3,0:4,3,0:48:85,0,50,213,215,428:188,0,197:5,0:5.0000e+01,6.5233e-05,5.3000e+01,2.1338e+02,2.4935e+02,4.3098e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,4,2:3,3,5,1 chr1 1551429 . C . PASS END=1551444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 1551445 . C . PASS END=1551455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1551456 . C . PASS END=1551465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 1551466 . A . PASS END=1551467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 1551468 . T . PASS END=1551468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1551469 . T . PASS END=1551480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:9:0,15,225:0,27,255:6,0 chr1 1551888 . G . PASS END=1551889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 1551890 . T . PASS END=1551900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 1551901 . G . PASS END=1551901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:23,0 chr1 1551902 . C . PASS END=1551904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1551905 . G . PASS END=1551910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1551911 . A . PASS END=1551911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,865:0,45,255:26,0 chr1 1551912 . G . PASS END=1551915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 1551916 . A . PASS END=1551916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:25,0 chr1 1551917 . G . PASS END=1551925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 1551926 . T . PASS END=1551926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:28,0 chr1 1551927 . T C, 142.40 PASS DP=32;MQ=249.97;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,7,0:0,25,0:92:180,95,0,1174,95,1174:255,96,0:0,0:1.4240e+02,9.2400e+01,0.0000e+00,4.5000e+02,1.2717e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,13:0,0,10,22 chr1 1551928 . T . PASS END=1551930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1551931 . A . PASS END=1551931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 1551932 . G . PASS END=1551944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1060:0,80,255:32,0 chr1 1551945 . C . PASS END=1551946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 1551947 . G . PASS END=1551949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 1551950 . C . PASS END=1551955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 1551956 . C . PASS END=1551964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1551965 . G . PASS END=1551967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1551968 . C . PASS END=1551987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 1551988 . C . PASS END=1551992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 1551993 . A . PASS END=1551993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:19,0 chr1 1551994 . G . PASS END=1551994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1558413 . A . PASS END=1558414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 1558769 . G . PASS END=1558776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1558777 . C . PASS END=1558777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 1558778 . A . PASS END=1558787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1558788 . A . PASS END=1558788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 1558789 . C . PASS END=1558791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 1558792 . T C, 119.23 PASS DP=24;MQ=244.33;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:69:157,72,0,931,72,931:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,11:0,0,12,12 chr1 1558793 . G . PASS END=1558802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,876:0,72,255:26,0 chr1 1558803 . G . PASS END=1558808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 1558809 . A . PASS END=1558810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 1558811 . G . PASS END=1558817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1558818 . G . PASS END=1558829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 1558830 . A . PASS END=1558837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 1558838 . C . PASS END=1558840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1558841 . A . PASS END=1558851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,1002:0,70,255:26,0 chr1 1558852 . C . PASS END=1558853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:27,0 chr1 1558854 . G . PASS END=1558882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 1558883 . C . PASS END=1558884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 1558885 . G . PASS END=1558887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1558888 . T . PASS END=1558889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 1558890 . G . PASS END=1558892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1558893 . T . PASS END=1558932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 1558933 . G . PASS END=1558933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 1558934 . C . PASS END=1558963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,637:0,54,255:18,0 chr1 1558964 . C . PASS END=1558970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 1558971 . A . PASS END=1558985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,775:0,50,255:19,0 chr1 1558986 . G . PASS END=1558986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1558987 . T . PASS END=1558988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 1558989 . G . PASS END=1558989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1558990 . T . PASS END=1558990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 1558991 . C . PASS END=1558992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1558993 . T . PASS END=1558993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 1558994 . G . PASS END=1558995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1558996 . A . PASS END=1558996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 1558997 . G . PASS END=1559006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 1559007 . G . PASS END=1559007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 1559008 . G . PASS END=1559015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1559016 . A . PASS END=1559016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:18,0 chr1 1559017 . C . PASS END=1559018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1559019 . A . PASS END=1559037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:19,0 chr1 1559038 . A . PASS END=1559038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:13,0 chr1 1559039 . G . PASS END=1559045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 1559046 . C . PASS END=1559046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 1559047 . A . PASS END=1559055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 1559056 . T . PASS END=1559056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 1559057 . G . PASS END=1559062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1559063 . C . PASS END=1559063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 1559064 . G . PASS END=1559067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 1559068 . A . PASS END=1559068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 1559069 . C . PASS END=1559079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:11,0 chr1 1559154 . G . PASS END=1559192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,604:0,48,255:19,0 chr1 1559193 . A . PASS END=1559210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 1559211 . T . PASS END=1559212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1559213 . C . PASS END=1559215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1559216 . T . PASS END=1559224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 1559225 . C . PASS END=1559225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 1559226 . G . PASS END=1559233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,721:0,57,255:19,0 chr1 1559234 . C . PASS END=1559234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 1559235 . T . PASS END=1559298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 1559299 . C . PASS END=1559320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:10:0,30,388:0,30,255:11,0 chr1 1559321 . C . PASS END=1559325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1560175 . T . PASS END=1560177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:30,0 chr1 1560178 . C . PASS END=1560178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 1560179 . A . PASS END=1560193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1103:0,90,255:34,0 chr1 1560194 . C . PASS END=1560194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:31,0 chr1 1560195 . A . PASS END=1560224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1210:0,86,255:38,0 chr1 1560225 . T . PASS END=1560225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr1 1560226 . C . PASS END=1560281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1308:0,101,255:39,0 chr1 1560371 . G . PASS END=1560416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1257:0,89,255:37,0 chr1 1560417 . T . PASS END=1560417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr1 1560418 . G . PASS END=1560423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1373:0,98,255:35,0 chr1 1560424 . A . PASS END=1560424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1134:0,64,255:32,0 chr1 1560425 . C . PASS END=1560464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1350:0,101,255:39,0 chr1 1560465 . C . PASS END=1560465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:30,0 chr1 1560466 . A . PASS END=1560490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:31,0 chr1 1560491 . A . PASS END=1560532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,815:0,66,255:26,0 chr1 1560533 . G . PASS END=1560533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 1560534 . C . PASS END=1560546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:23,0 chr1 1560547 . G . PASS END=1560547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 1560548 . A . PASS END=1560562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 1560563 . T . PASS END=1560565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 1560666 . G . PASS END=1560672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 1560673 . G . PASS END=1560684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 1560685 . G . PASS END=1560702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1560703 . C . PASS END=1560703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 1560704 . A . PASS END=1560705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1560706 . C . PASS END=1560706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1560707 . C . PASS END=1560707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 1560708 . A . PASS END=1560720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,643:0,40,255:19,0 chr1 1560721 . C . PASS END=1560722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 1560723 . G . PASS END=1560723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 1560724 . G . PASS END=1560725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 1560726 . A . PASS END=1560726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 1560727 . C . PASS END=1560746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:22,0 chr1 1560747 . A . PASS END=1560747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 1560748 . C . PASS END=1560753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1560754 . T . PASS END=1560754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:21,0 chr1 1560755 . G . PASS END=1560761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 1560762 . G . PASS END=1560767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,709:0,52,255:19,0 chr1 1560768 . T . PASS END=1560773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1560774 . A . PASS END=1560808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,1 chr1 1560926 . T . PASS END=1560940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,731:0,63,255:23,0 chr1 1560941 . G . PASS END=1560942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 1560943 . C . PASS END=1560946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 1560947 . G . PASS END=1560947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 1560948 . T . PASS END=1560948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1560949 . G . PASS END=1560949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:18,0 chr1 1560950 . C . PASS END=1560959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 1560960 . C . PASS END=1560960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1560961 . G . PASS END=1560961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:17,0 chr1 1560962 . G . PASS END=1560965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1560966 . G . PASS END=1560966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 1560967 . C . PASS END=1560968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1560969 . G . PASS END=1560970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 1560971 . G . PASS END=1560971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1560972 . A . PASS END=1561006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 1561007 . A . PASS END=1561033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr1 1561289 . G . PASS END=1561293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,480:0,39,255:13,0 chr1 1561294 . C . PASS END=1561301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 1561302 . C . PASS END=1561330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 1561331 . G A, 88.68 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,7,0:0,7,0:39:126,42,0,506,42,506:255,42,0:0,0:8.8680e+01,3.8680e+01,5.8869e-04,4.5000e+02,7.3450e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,8:0,0,9,5 chr1 1561332 . G . PASS END=1561332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1561333 . C . PASS END=1561333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 1561334 . T . PASS END=1561347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,480:0,39,255:13,0 chr1 1561348 . C . PASS END=1561348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 1561349 . C . PASS END=1561351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 1561747 . C . PASS END=1561766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 1561767 . C . PASS END=1561780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 1561781 . C . PASS END=1561785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1561786 . A . PASS END=1561788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1561789 . T . PASS END=1561791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1561792 . C . PASS END=1561803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 1561804 . T . PASS END=1561804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 1561805 . G . PASS END=1561808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 1561809 . A . PASS END=1561809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 1561810 . C . PASS END=1561824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 1561825 . T . PASS END=1561832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1561833 . G . PASS END=1561833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1562030 . C . PASS END=1562034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,929:0,62,255:25,0 chr1 1562035 . C . PASS END=1562035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:25,0 chr1 1562036 . T . PASS END=1562058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,817:0,61,255:25,0 chr1 1562059 . C . PASS END=1562059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:24,0 chr1 1562060 . C . PASS END=1562061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,864:0,61,255:25,0 chr1 1562062 . G . PASS END=1562092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1011:0,80,255:31,0 chr1 1562093 . C . PASS END=1562093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr1 1562094 . T . PASS END=1562120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr1 1562121 . A . PASS END=1562134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,70,255:25,0 chr1 1562217 . G . PASS END=1562222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,698:0,46,255:18,0 chr1 1562223 . G . PASS END=1562223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:18,0 chr1 1562224 . G . PASS END=1562225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:18:0,54,653:0,54,255:18,0 chr1 1562226 . C . PASS END=1562226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 1562227 . G . PASS END=1562229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr1 1562230 . T . PASS END=1562232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 1562233 . G . PASS END=1562233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 1562234 . G . PASS END=1562246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,691:0,60,255:22,0 chr1 1562247 . G . PASS END=1562247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 1562248 . T . PASS END=1562282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,886:0,62,255:26,0 chr1 1562283 . G . PASS END=1562399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1088:0,80,255:37,0 chr1 1562400 . C . PASS END=1562435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:37:0,93,1341:0,93,255:40,0 chr1 1562454 . G . PASS END=1562474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1568:0,105,255:40,0 chr1 1562475 . A . PASS END=1562556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1147:0,80,255:40,0 chr1 1562557 . T . PASS END=1562573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:25:0,65,969:0,65,255:26,0 chr1 1562574 . G . PASS END=1562574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 1562575 . G . PASS END=1562587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 1562676 . G . PASS END=1562793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:37:0,91,1372:0,91,255:40,0 chr1 1562794 . G . PASS END=1562794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:32,0 chr1 1562795 . C . PASS END=1562801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:36:0,81,1215:0,98,255:33,0 chr1 1562802 . G . PASS END=1562814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:25:0,63,945:0,69,255:25,0 chr1 1562815 . C . PASS END=1562824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,53,255:17,0 chr1 1563053 . G . PASS END=1563062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 1563063 . G . PASS END=1563064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1563065 . G . PASS END=1563066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1563067 . C . PASS END=1563067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 1563068 . C . PASS END=1563068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1563069 . A . PASS END=1563069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 1563070 . C . PASS END=1563075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 1563076 . T . PASS END=1563096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:19,0 chr1 1563097 . G . PASS END=1563097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 1563098 . G . PASS END=1563102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:19,0 chr1 1563103 . A . PASS END=1563105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 1563106 . C . PASS END=1563106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 1563107 . C . PASS END=1563111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1563112 . A . PASS END=1563124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:23,0 chr1 1563125 . C . PASS END=1563127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 1563128 . A . PASS END=1563128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 1563129 . G . PASS END=1563131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr1 1563132 . C . PASS END=1563137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1563138 . G . PASS END=1563148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 1563149 . G . PASS END=1563149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1563150 . A . PASS END=1563150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 1563151 . G . PASS END=1563153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1100:0,84,255:30,0 chr1 1563154 . G . PASS END=1563154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 1563155 . C . PASS END=1563168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1013:0,90,255:30,0 chr1 1563169 . T . PASS END=1563169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:28,0 chr1 1563170 . G . PASS END=1563175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 1563176 . C . PASS END=1563176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 1563177 . C . PASS END=1563177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1563178 . T . PASS END=1563178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 1563179 . G . PASS END=1563179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1563180 . T . PASS END=1563204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,842:0,64,255:26,0 chr1 1563205 . T . PASS END=1563205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 1563206 . G . PASS END=1563209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1563399 . G . PASS END=1563400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 1563401 . C . PASS END=1563403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 1563404 . C . PASS END=1563404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 1563405 . C . PASS END=1563423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 1563424 . A . PASS END=1563424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 1563425 . C . PASS END=1563428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1563429 . G . PASS END=1563429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 1563430 . C . PASS END=1563431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1563432 . A . PASS END=1563432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 1563433 . T . PASS END=1563434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 1563435 . T . LowGQ END=1563435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,565:1,0,255:15,0 chr1 1563436 . C . PASS END=1563436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 1563437 . G . PASS END=1563457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 1563458 . C . PASS END=1563458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 1563459 . A . PASS END=1563468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:18,0 chr1 1563469 . T . PASS END=1563469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 1563470 . C . PASS END=1563487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:24,0 chr1 1563488 . C . PASS END=1563488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 1563489 . A . PASS END=1563503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 1563504 . A . PASS END=1563504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 1563505 . C . PASS END=1563511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,853:0,66,255:22,0 chr1 1563512 . C . PASS END=1563529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,52,255:18,0 chr1 1563530 . G . PASS END=1563530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:15,0 chr1 1563531 . C . PASS END=1563537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 1563538 . C . PASS END=1563539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 1563540 . T . PASS END=1563559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,704:0,44,255:19,0 chr1 1563653 . A . PASS END=1563653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 1563654 . G . PASS END=1563655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 1563656 . T . PASS END=1563657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 1563658 . T . PASS END=1563660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1563661 . G . PASS END=1563661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 1563662 . A . PASS END=1563666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1058:0,87,255:30,0 chr1 1563667 . T . PASS END=1563667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 1563668 . T . PASS END=1563669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 1563670 . T . PASS END=1563670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 1563671 . G . PASS END=1563678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1178:0,93,255:32,0 chr1 1563679 . C . PASS END=1563679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 1563680 . G . PASS END=1563730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:33,0 chr1 1563731 . G . PASS END=1563731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 1563732 . G . PASS END=1563735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 1563736 . C . PASS END=1563736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 1563737 . C . PASS END=1563740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1563741 . A . PASS END=1563751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1563752 . C . PASS END=1563756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1563757 . T . PASS END=1563767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:24,0 chr1 1563768 . C . PASS END=1563768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,767:0,25,255:18,0 chr1 1563769 . T . PASS END=1563771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:19,0 chr1 1563772 . T . PASS END=1563774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:20,0 chr1 1563775 . G . PASS END=1563777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr1 1563778 . A . PASS END=1563779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:23:0,36,540:0,69,255:12,0 chr1 1563869 . G . PASS END=1563874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,725:0,60,255:21,0 chr1 1563875 . T . PASS END=1563875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,609:0,46,255:20,0 chr1 1563876 . G . PASS END=1563879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 1563880 . C . PASS END=1563880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 1563881 . G . PASS END=1563884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 1563885 . A . PASS END=1563885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 1563886 . C . PASS END=1563901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:26,0 chr1 1563902 . C . PASS END=1563903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1563904 . G . PASS END=1563904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 1563905 . C . PASS END=1563905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 1563906 . A . PASS END=1563935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,886:0,64,255:26,0 chr1 1563936 . C . PASS END=1563946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:23:0,55,800:0,55,255:19,0 chr1 1563947 . C . PASS END=1563952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 1563953 . C . PASS END=1563953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1563954 . C . PASS END=1563957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1563958 . A . PASS END=1563960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1563961 . G . PASS END=1563962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1563963 . T . PASS END=1563963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 1563964 . G . PASS END=1563966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1563967 . C . PASS END=1563968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 1563969 . C . PASS END=1563970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1563971 . G . PASS END=1563972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1563973 . G . PASS END=1563976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1563977 . A . PASS END=1563977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1563978 . G . PASS END=1563978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1563979 . T . PASS END=1563980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1563981 . T . PASS END=1563997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:20,0 chr1 1563998 . G . PASS END=1564019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 1564020 . T . PASS END=1564040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1564041 . T . PASS END=1564041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 1564042 . G . PASS END=1564055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 1564056 . C . PASS END=1564056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr1 1564057 . T . PASS END=1564077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 1564078 . A . PASS END=1564093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 1564094 . C . PASS END=1564101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:8:0,12,180:0,24,255:6,0 chr1 1564102 . G . LowGQ END=1564102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:4,0 chr1 1564414 . A . PASS END=1564426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 1564427 . G . PASS END=1564427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1564428 . C . PASS END=1564470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:17,0 chr1 1564471 . G . PASS END=1564471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 1564472 . C . PASS END=1564479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 1564480 . C . PASS END=1564482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1564483 . G . PASS END=1564491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 1564492 . G . PASS END=1564492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 1564493 . G . PASS END=1564495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1564496 . T . PASS END=1564496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 1564497 . C . PASS END=1564501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:15,0 chr1 1564502 . C . PASS END=1564502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 1564503 . T . PASS END=1564503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 1564504 . G . PASS END=1564504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 1564505 . C . PASS END=1564505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 1564506 . C . PASS END=1564506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 1564507 . G . PASS END=1564515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:16,0 chr1 1564516 . C . PASS END=1564516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 1564517 . A . PASS END=1564546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,615:0,48,255:17,0 chr1 1564547 . T . PASS END=1564547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:13,0 chr1 1564548 . G . PASS END=1564558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 1564559 . C . PASS END=1564559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 1564560 . G . PASS END=1564600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 1564601 . G . PASS END=1564601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 1564602 . C . PASS END=1564602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1564603 . T . PASS END=1564603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 1564604 . A . PASS END=1564609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 1564610 . A . PASS END=1564610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,553:0,23,255:15,0 chr1 1564611 . C . PASS END=1564624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 1564625 . G . PASS END=1564627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1564628 . C . PASS END=1564639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 1564640 . C . PASS END=1564640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 1564641 . C . PASS END=1564644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1564645 . G . PASS END=1564645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 1564646 . A . PASS END=1564653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 1564654 . G . PASS END=1564663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 1564664 . C . PASS END=1564664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 1564665 . C . PASS END=1564667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1564668 . T . PASS END=1564674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1564675 . T . PASS END=1564691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 1564765 . G . PASS END=1564766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,515:0,48,255:16,0 chr1 1564767 . A . PASS END=1564767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 1564768 . G . PASS END=1564772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 1564773 . A . PASS END=1564773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 1564774 . G . PASS END=1564779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 1564780 . C . PASS END=1564780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 1564781 . G . PASS END=1564785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 1564786 . C . PASS END=1564787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,1 chr1 1564788 . C . LowGQ END=1564788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,512:1,0,255:16,0 chr1 1564789 . G . PASS END=1564791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,676:0,43,255:19,0 chr1 1564792 . C . PASS END=1564794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1564795 . G . PASS END=1564795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 1564796 . G . PASS END=1564801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,801:0,69,255:24,0 chr1 1564802 . A . PASS END=1564802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,775:0,25,255:22,0 chr1 1564803 . G . PASS END=1564804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 1564805 . C . PASS END=1564813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:26,0 chr1 1564814 . G . PASS END=1564814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 1564815 . G . PASS END=1564817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 1564818 . C . PASS END=1564836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1142:0,80,255:31,0 chr1 1564837 . C . PASS END=1564837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 1564838 . C . PASS END=1564839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 1564840 . G . PASS END=1564840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 1564841 . C . PASS END=1564841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 1564842 . A . PASS END=1564842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 1564843 . C . PASS END=1564844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 1564845 . T . PASS END=1564845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 1564846 . G . PASS END=1564858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 1564859 . G . PASS END=1564867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 1564868 . G . PASS END=1564907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1049:0,84,255:33,0 chr1 1564908 . T . PASS END=1564908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 1564909 . G . PASS END=1564929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:31:0,60,900:0,65,255:26,0 chr1 1564930 . C . PASS END=1564943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:26:0,42,630:0,57,255:19,0 chr1 1564944 . A . PASS END=1564951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:23:0,36,540:0,69,255:13,0 chr1 1564952 . TG T, 48.42 PASS DP=23;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=0.868;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,9,0:0.409,0.000:22:6,4,0:7,5,0:47:77,0,50,264,380,644:255,0,255:10,13:4.8415e+01,8.4389e-05,5.3000e+01,2.6988e+02,4.1443e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:7,6,6,3:10,3,7,2 chr1 1564953 . G . LowGQ END=1564954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,13:27:0:23:0,0,83:255,0,255:19,13 chr1 1564955 . G . PASS END=1564998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,629:0,51,255:19,0 chr1 1564999 . C . PASS END=1565007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:19,0 chr1 1565008 . C . PASS END=1565020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,66,255:25,0 chr1 1565021 . T . PASS END=1565021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 1565022 . G . PASS END=1565030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,978:0,67,255:25,0 chr1 1565031 . G . PASS END=1565035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 1565036 . A . PASS END=1565036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 1565037 . A . PASS END=1565045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 1565046 . T . PASS END=1565068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,68,255:25,0 chr1 1565069 . A . PASS END=1565069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 1565070 . A . PASS END=1565084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 1565672 . A . PASS END=1565672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr1 1565673 . C . PASS END=1565673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1565674 . G . PASS END=1565674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 1565675 . G . PASS END=1565678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 1565679 . T . PASS END=1565683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:19,0 chr1 1565684 . T . LowGQ END=1565684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:17,0,255:18,0 chr1 1565685 . G . PASS END=1565687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1565688 . G . PASS END=1565688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 1565689 . A . PASS END=1565689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 1565690 . G . PASS END=1565690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1565691 . C . PASS END=1565692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 1565693 . C . PASS END=1565693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,631:0,24,255:19,0 chr1 1565694 . C . PASS END=1565694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1565695 . G . PASS END=1565695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 1565696 . C . PASS END=1565700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1565701 . G . PASS END=1565701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,617:0,46,255:20,0 chr1 1565702 . C . PASS END=1565702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1565703 . C . PASS END=1565703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:20,0 chr1 1565704 . C . PASS END=1565707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,611:0,60,255:20,0 chr1 1565708 . G . PASS END=1565708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 1565709 . C . PASS END=1565719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,693:0,63,255:21,0 chr1 1565720 . A . PASS END=1565720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,593:0,18,255:20,0 chr1 1565721 . G . PASS END=1565722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,740:0,66,255:22,0 chr1 1565723 . T . PASS END=1565723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,548:0,32,255:20,0 chr1 1565724 . G . PASS END=1565729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,712:0,69,255:23,0 chr1 1565730 . G . PASS END=1565730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:22,0 chr1 1565731 . G . PASS END=1565733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,840:0,75,255:25,0 chr1 1565734 . C . PASS END=1565738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr1 1565739 . G . PASS END=1565739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 1565740 . A . PASS END=1565740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 1565741 . G . PASS END=1565741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:18:28:0,18,798:0,18,255:24,0 chr1 1565742 . C . PASS END=1565742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:26,0 chr1 1565743 . C . PASS END=1565743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 1565744 . G . PASS END=1565744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,856:0,31,255:27,0 chr1 1565745 . C . PASS END=1565748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 1565749 . C . PASS END=1565749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:27,0 chr1 1565750 . G . PASS END=1565750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 1565751 . G . PASS END=1565753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 1565754 . G . PASS END=1565754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:27,0 chr1 1565755 . A . PASS END=1565758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1565759 . A . PASS END=1565760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,967:0,40,255:28,0 chr1 1565761 . G . PASS END=1565761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1565762 . A . PASS END=1565762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 1565763 . A . PASS END=1565763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1565764 . C . PASS END=1565764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 1565765 . G . PASS END=1565765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:26,0 chr1 1565766 . C . PASS END=1565767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 1565768 . T . PASS END=1565768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:27,0 chr1 1565769 . C . PASS END=1565770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1565771 . C . PASS END=1565771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:26,0 chr1 1565772 . C . PASS END=1565772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1565773 . T . LowGQ END=1565773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,672:55,0,255:23,0 chr1 1565774 . G . PASS END=1565778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 1565779 . A . PASS END=1565779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 1565780 . T . LowGQ END=1565780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,843:4,0,255:25,0 chr1 1565781 . C . PASS END=1565781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1565782 . T . PASS END=1565783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,999:0,76,255:28,0 chr1 1565784 . C . PASS END=1565784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 1565785 . A . PASS END=1565785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:26,0 chr1 1565786 . T . PASS END=1565787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,996:0,40,255:27,0 chr1 1565788 . G . PASS END=1565791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1003:0,63,255:25,0 chr1 1565792 . G . PASS END=1565792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,972:0,46,255:25,0 chr1 1565793 . C . PASS END=1565795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1080:0,77,255:25,0 chr1 1565796 . C . PASS END=1565796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1565797 . A . PASS END=1565799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,994:0,60,255:26,0 chr1 1565800 . C . PASS END=1565800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1565801 . G . PASS END=1565801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,853:0,34,255:24,0 chr1 1565802 . C . PASS END=1565802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 1565803 . C . PASS END=1565803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1565804 . T . PASS END=1565804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:26,0 chr1 1565805 . C . PASS END=1565805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 1565806 . G . PASS END=1565807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 1565808 . G . PASS END=1565808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 1565809 . T . PASS END=1565822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,947:0,65,255:26,0 chr1 1565823 . C . PASS END=1565823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:22,0 chr1 1565824 . G . PASS END=1565833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:24,0 chr1 1565834 . C . PASS END=1565834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 1565835 . C . PASS END=1565838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 1565839 . T . PASS END=1565839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:19,0 chr1 1565840 . G . PASS END=1565841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1565842 . G . PASS END=1565843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,855:0,59,255:20,0 chr1 1565844 . C . PASS END=1565847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 1565848 . G . PASS END=1565872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:17:0,42,630:0,43,255:19,0 chr1 1565873 . G . PASS END=1565873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 1565874 . C . PASS END=1565880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1565881 . A . PASS END=1565881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:12,0 chr1 1565882 . T . PASS END=1565890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 1565891 . G . PASS END=1565910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 1567598 . A . PASS END=1567609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 1567610 . G . LowGQ END=1567610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,296:6,0,255:10,0 chr1 1567611 . C . PASS END=1567650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 1567651 . C . PASS END=1567668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:17,0 chr1 1567669 . G . PASS END=1567669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 1567670 . C . PASS END=1567673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1567674 . T . PASS END=1567674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 1567675 . C . PASS END=1567675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1567676 . G . PASS END=1567676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 1567677 . C . PASS END=1567681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1567682 . T . PASS END=1567682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:13,0 chr1 1567683 . G . PASS END=1567693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1567694 . G . PASS END=1567694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1567695 . C . PASS END=1567698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1567699 . G . PASS END=1567700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1567701 . T . PASS END=1567702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 1567703 . C . PASS END=1567703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 1567704 . T . PASS END=1567717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 1567718 . G . PASS END=1567718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 1567719 . G . PASS END=1567721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1567722 . C . PASS END=1567722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 1567723 . C . PASS END=1567730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 1567731 . T . PASS END=1567731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:12,0 chr1 1567732 . G . PASS END=1567735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1567736 . G . PASS END=1567741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1567742 . A . PASS END=1567742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 1567743 . G . PASS END=1567745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1567746 . C . PASS END=1567754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 1567755 . T . PASS END=1567755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:10,0 chr1 1567756 . G . PASS END=1567758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 1567759 . C . PASS END=1567759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr1 1567760 . G . PASS END=1567761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 1567762 . C . PASS END=1567762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:12,1 chr1 1567763 . G . PASS END=1567763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:13,0 chr1 1567764 . G . PASS END=1567765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1567766 . G . PASS END=1567766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1567767 . G . LowGQ END=1567773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,441:0,0,255:14,1 chr1 1567774 . C . PASS END=1567779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 1567780 . C . PASS END=1567780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 1567781 . C . PASS END=1567785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 1567786 . T . PASS END=1567786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1567787 . G . PASS END=1567787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 1567788 . G . PASS END=1567794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 1567795 . C . PASS END=1567800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1567801 . G . PASS END=1567802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 1567803 . C . PASS END=1567803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 1567804 . T . PASS END=1567804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 1567805 . G . PASS END=1567806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 1567807 . G . PASS END=1567807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 1567808 . G . PASS END=1567811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,645:0,54,255:18,0 chr1 1567812 . T . PASS END=1567812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 1567813 . G . PASS END=1567815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1567816 . C . PASS END=1567825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:20:0,53,798:0,53,255:19,0 chr1 1567826 . G . PASS END=1567826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr1 1567827 . C . PASS END=1567836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:23,0 chr1 1567837 . G . PASS END=1567837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 1567838 . T . PASS END=1567841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1567842 . C . PASS END=1567842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr1 1567843 . G . PASS END=1567848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1567849 . T . PASS END=1567849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 1567850 . G . PASS END=1567856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 1567857 . G . PASS END=1567857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 1567858 . T . PASS END=1567864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr1 1567865 . G . PASS END=1567865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 1567866 . T . PASS END=1567869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,787:0,69,255:23,0 chr1 1567870 . G . PASS END=1567870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1567871 . A . PASS END=1567872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1567873 . G . PASS END=1567873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 1567874 . T . PASS END=1567881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1567882 . G . PASS END=1567882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 1567883 . A . PASS END=1567888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1567889 . G . PASS END=1567931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,623:0,44,255:19,0 chr1 1567932 . G . PASS END=1567942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 1567943 . G . PASS END=1567943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 1567944 . C . PASS END=1567950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 1567951 . G . PASS END=1567962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:11:9:0,11,270:0,11,255:6,0 chr1 1567963 . C . PASS END=1567985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 1567986 . C . PASS END=1568035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,178:6,0 chr1 1568036 . A . LowGQ END=1568106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,31:3,0 chr1 1568107 . T . PASS END=1568109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:4,0 chr1 1568110 . T . LowGQ END=1568158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:3:0,0,0:0,0,24:3,0 chr1 1568159 . A . LowGQ END=1568252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,31:3,0 chr1 1568253 . C . LowDepth;LowGQ END=1568292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1568360 . G . LowDepth;LowGQ END=1568579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1568580 . C . LowDepth;LowGQ END=1568734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1568737 . G . LowDepth;LowGQ END=1568859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1569127 . G . LowDepth;LowGQ END=1569291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1569292 . G . LowDepth;LowGQ END=1569367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1569368 . G . LowDepth;LowGQ END=1569478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1569581 . A . LowDepth;LowGQ END=1569708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1569827 . C . PASS END=1569885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 1569886 . A . PASS END=1569892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1569893 . C . PASS END=1569893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 1569894 . C . PASS END=1569895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 1569896 . G . PASS END=1569918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 1569919 . A . LowGQ END=1569919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:9,0,187:6,0 chr1 1569920 . T . PASS END=1569928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 1569929 . C . PASS END=1569930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 1569931 . A . PASS END=1569931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 1569932 . C . PASS END=1569936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 1569937 . G . PASS END=1569937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1569938 . C . PASS END=1570001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 1571126 . T . LowDepth;LowGQ END=1571218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1571299 . C . LowDepth;LowGQ END=1571388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1571389 . G . PASS END=1571488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 1571695 . T . PASS END=1571703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr1 1571704 . A . PASS END=1571704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:30,0 chr1 1571705 . G . PASS END=1571790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:34:0,89,1239:0,89,255:40,0 chr1 1571791 . G . PASS END=1571828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,133,255:40,0 chr1 1571829 . A G, 36.53 PASS DP=51;MQ=88.99;MQRankSum=-5.866;ReadPosRankSum=1.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,21,0:0.412,0.000:51:8,8,0:22,13,0:36:71,0,48,722,1068,1790:255,0,255:25,0:3.6527e+01,1.0042e-03,5.0601e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,3,18:19,11,12,9:1571829 chr1 1571830 . G . PASS END=1571840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,125,255:40,0 chr1 1571841 . A C, 37.49 PASS DP=47;MQ=89.35;MQRankSum=-5.820;ReadPosRankSum=-0.377;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:27,20,0:0.426,0.000:47:7,7,0:20,13,0:37:72,0,48,714,929,1643:255,0,255:24,0:3.7495e+01,8.1108e-04,5.0601e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,19,5,15:16,11,12,8:1571829 chr1 1571842 . T . PASS END=1571843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,122,255:40,0 chr1 1572044 . C . PASS END=1572160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:50:0,120,1800:0,141,255:40,0 chr1 1572259 . C . PASS END=1572284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1274:0,84,255:39,0 chr1 1572285 . C . PASS END=1572285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1280:0,70,255:35,0 chr1 1572286 . G . PASS END=1572295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,108,1620:0,117,255:40,0 chr1 1572296 . A . PASS END=1572296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1564:0,69,255:37,0 chr1 1572297 . G . PASS END=1572366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,141,255:40,0 chr1 1572443 . C . PASS END=1572564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,102,1530:0,103,255:40,0 chr1 1572770 . C . PASS END=1572855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,139,255:40,0 chr1 1572856 . T . PASS END=1572875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,110,1676:0,110,255:40,0 chr1 1573124 . T . PASS END=1573143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,131,255:40,0 chr1 1573144 . G . PASS END=1573180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,158,255:40,0 chr1 1573181 . C A, 6.92 DRAGENSnpHardQUAL DP=72;MQ=45.59;MQRankSum=-2.648;ReadPosRankSum=4.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:56,16,0:0.222,0.000:72:32,10,0:24,6,0:7:41,0,43,560,2002,2562:255,0,255:40,0:6.9229e+00,9.8607e-01,4.7361e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:34,22,10,6:26,30,8,8 chr1 1573182 . G . PASS END=1573218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,161,255:40,0 chr1 1573219 . T . PASS END=1573245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,126,255:40,0 chr1 1573862 . C . PASS END=1573889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:12,0 chr1 1573890 . C . PASS END=1573890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 1573891 . A . PASS END=1573922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 1573923 . G . PASS END=1573923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 1573924 . C . PASS END=1573936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 1573937 . C . PASS END=1573950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 1573951 . C . PASS END=1573952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 1575638 . C . PASS END=1575638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 1575639 . T . PASS END=1575653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1056:0,80,255:32,0 chr1 1575654 . T . PASS END=1575714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1196:0,96,255:34,0 chr1 1575715 . C . PASS END=1575715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr1 1575716 . G . PASS END=1575718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 1575719 . C . PASS END=1575720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 1575721 . C . PASS END=1575746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:33,0 chr1 1575747 . C . PASS END=1575783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1247:0,86,255:35,0 chr1 1575784 . C T, 15.72 PASS DP=32;MQ=20.87;MQRankSum=1.844;ReadPosRankSum=2.599;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,9,0:0.281,0.000:32:8,7,0:15,2,0:16:50,0,30,285,812,1097:222,0,255:21,0:1.5716e+01,1.2008e-01,3.3453e+01,2.8507e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,3,6:9,14,5,4 chr1 1575785 . G . PASS END=1575813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1103:0,80,255:30,0 chr1 1576409 . C . PASS END=1576439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,799:0,66,255:24,0 chr1 1576440 . T . PASS END=1576474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,864:0,69,255:24,0 chr1 1577023 . C . LowDepth;LowGQ END=1577066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 1577067 . T . LowDepth;LowGQ END=1577158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 1577159 . C . PASS END=1577181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1577267 . C . PASS END=1577289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 1577290 . G . PASS END=1577337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr1 1577338 . C . PASS END=1577340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,103:3,0 chr1 1577341 . T . PASS END=1577359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr1 1577360 . T . PASS END=1577362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr1 1577708 . A . LowDepth;LowGQ END=1577869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr1 1580487 . C . PASS END=1580496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 1580497 . G . PASS END=1580497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1580498 . G . PASS END=1580499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 1580500 . C . PASS END=1580509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 1580510 . T . PASS END=1580510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:15,0 chr1 1580511 . T . PASS END=1580515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 1580516 . C . PASS END=1580516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 1580517 . G . PASS END=1580518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 1580519 . T . PASS END=1580519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 1580520 . C . PASS END=1580520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 1580521 . C . PASS END=1580522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 1580523 . C . PASS END=1580523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 1580524 . C . PASS END=1580526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr1 1580527 . C . PASS END=1580531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 1580532 . G . PASS END=1580534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,574:0,12,255:17,0 chr1 1580535 . C . PASS END=1580535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 1580536 . G . PASS END=1580538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:15:18:0,15,620:0,15,255:18,0 chr1 1580539 . C . PASS END=1580539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 1580540 . T . PASS END=1580540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 1580541 . C . PASS END=1580547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:24,0 chr1 1580548 . C . PASS END=1580548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 1580549 . T . PASS END=1580549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 1580550 . C . PASS END=1580550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 1580551 . C . PASS END=1580555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:26,0 chr1 1580556 . G . PASS END=1580576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,992:0,81,255:31,0 chr1 1580577 . T . PASS END=1580577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:30,0 chr1 1580578 . C . PASS END=1580665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1164:0,83,255:40,0 chr1 1581134 . A . PASS END=1581245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:286,0:286:99:215:0,120,1800:0,255,255:40,8 chr1 1581472 . A . PASS END=1581520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:39:0,90,1350:0,90,255:40,0 chr1 1581521 . A . PASS END=1581529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1115:0,80,255:30,0 chr1 1581530 . T . PASS END=1581530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:26,0 chr1 1581531 . C . PASS END=1581533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 1581534 . G . PASS END=1581534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 1581535 . T . PASS END=1581537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 1581538 . T . PASS END=1581539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 1586823 . C . PASS END=1586826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 1586827 . C . PASS END=1586827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1586828 . T . PASS END=1586828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1586829 . T . PASS END=1586938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1260:0,90,255:40,0 chr1 1588706 . C . PASS END=1588714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:101:0,120,1800:0,255,255:40,0 chr1 1588825 . A . PASS END=1588935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,117,1755:0,124,255:40,0 chr1 1591473 . T . PASS END=1591572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,141,255:40,0 chr1 1597186 . T . PASS END=1597186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1597187 . C . PASS END=1597187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 1597188 . A . PASS END=1597188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 1597189 . C . PASS END=1597214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1064:0,84,255:30,0 chr1 1597215 . C . PASS END=1597216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 1597217 . G . PASS END=1597226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 1597227 . A . PASS END=1597228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 1597229 . G . PASS END=1597234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 1597235 . T . PASS END=1597235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 1597236 . G . PASS END=1597236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1597237 . G . PASS END=1597237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 1597238 . G . PASS END=1597238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1597239 . G . PASS END=1597240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1597241 . C . PASS END=1597243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1597244 . G . PASS END=1597301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:26,0 chr1 1597302 . C . PASS END=1597305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1597306 . A . PASS END=1597309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr1 1597310 . C . PASS END=1597311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 1597312 . T . PASS END=1597316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 1597317 . C . PASS END=1597321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1597322 . G . PASS END=1597322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1597323 . T . PASS END=1597326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 1597327 . C . PASS END=1597327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 1597328 . T . PASS END=1597340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 1597341 . G . PASS END=1597341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 1597342 . A . PASS END=1597342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 1597343 . G . PASS END=1597343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 1597344 . C . PASS END=1597355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 1597356 . G . PASS END=1597356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1049:0,62,255:29,0 chr1 1597357 . G . PASS END=1597357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1597358 . T . PASS END=1597358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 1597359 . C . PASS END=1597423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1082:0,86,255:35,0 chr1 1597424 . A . PASS END=1597424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 1597425 . G . PASS END=1597427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1597428 . G . PASS END=1597446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,870:0,64,255:26,0 chr1 1597447 . G . PASS END=1597453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr1 1597454 . C . PASS END=1597456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr1 1597457 . C . PASS END=1597458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:17,0 chr1 1599766 . C . PASS END=1599774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 1599775 . A . PASS END=1599785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 1599786 . T . PASS END=1599793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1599794 . T . PASS END=1599797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 1599798 . G . PASS END=1599801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 1599802 . T . PASS END=1599803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 1599804 . C . PASS END=1599811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,623:0,51,255:18,0 chr1 1599812 . C T, 7.53 DRAGENSnpHardQUAL DP=18;MQ=35.02;MQRankSum=1.896;ReadPosRankSum=-1.659;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,3,0:0.167,0.000:18:9,1,0:6,2,0:8:41,0,42,107,537,644:62,0,255:15,0:7.5269e+00,8.4471e-01,4.5595e+01,1.0806e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,3,0:3,12,1,2 chr1 1599813 . G . PASS END=1599813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 1599814 . C . PASS END=1599814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 1599815 . T . PASS END=1599817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,652:0,41,255:19,0 chr1 1599818 . G . PASS END=1599819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 1599820 . A . PASS END=1599820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 1599821 . G . PASS END=1599824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 1599825 . G . PASS END=1599825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1599826 . A . PASS END=1599828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 1599829 . A . PASS END=1599887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,617:0,41,255:19,0 chr1 1599888 . A G, 48.81 PASS DP=19;MQ=57.11;MQRankSum=3.101;ReadPosRankSum=2.824;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:5,14,0:0.737,0.000:19:2,7,0:3,7,0:3:84,3,0,504,182,683:255,0,137:5,0:4.8814e+01,3.0642e+00,2.9572e+00,4.5000e+02,2.1666e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,11,3:3,2,8,6 chr1 1599889 . C . PASS END=1599902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 1599903 . T . PASS END=1599903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 1599904 . G . PASS END=1599911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 1601103 . C . PASS END=1601111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 1601112 . A . PASS END=1601112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 1601113 . A . PASS END=1601173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 1601174 . C . PASS END=1601175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1601537 . G . PASS END=1601590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:78:0,120,1800:0,216,255:40,0 chr1 1602948 . C . PASS END=1602949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 1602950 . G . PASS END=1602959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:22,0 chr1 1602960 . T . PASS END=1602969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 1602970 . G . PASS END=1602971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 1602972 . G . PASS END=1602980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 1602981 . A . PASS END=1602981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 1602982 . A . PASS END=1603045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1105:0,82,255:33,0 chr1 1603046 . G . PASS END=1603048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1603049 . G . PASS END=1603057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:27,0 chr1 1603058 . G . PASS END=1603068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 1606902 . C . PASS END=1606906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1606907 . T . PASS END=1606907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 1606908 . A . PASS END=1606917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:30,0 chr1 1606918 . A . PASS END=1606918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:29,0 chr1 1606919 . A . PASS END=1606926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1080:0,90,255:30,0 chr1 1606927 . A . PASS END=1606927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 1606928 . G . PASS END=1606934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1606935 . T . PASS END=1606935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:26,0 chr1 1606936 . C . PASS END=1606939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1606940 . G . PASS END=1606940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 1606941 . T . PASS END=1606942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1606943 . A . PASS END=1606943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 1606944 . A . PASS END=1606967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1033:0,87,255:29,0 chr1 1606968 . T . PASS END=1606968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:26,0 chr1 1606969 . C . PASS END=1606969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1606970 . T . PASS END=1606977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 1606978 . C . PASS END=1606978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:23,0 chr1 1606979 . G . PASS END=1606992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:24,0 chr1 1606993 . T . PASS END=1606993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 1606994 . T . PASS END=1606994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1606995 . T . PASS END=1606996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:22,0 chr1 1606997 . A . PASS END=1606997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1606998 . G . PASS END=1606998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:21,0 chr1 1606999 . G . PASS END=1606999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 1607000 . C . PASS END=1607000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 1607001 . T . PASS END=1607001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1607002 . G . PASS END=1607002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 1607003 . A . PASS END=1607004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1607005 . C . PASS END=1607011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,52,255:18,0 chr1 1607012 . A . PASS END=1607012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:14,0 chr1 1607013 . A . PASS END=1607014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr1 1607015 . A . PASS END=1607026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,46,255:13,0 chr1 1607027 . A . PASS END=1607027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,447:0,15,255:10,0 chr1 1607028 . A . PASS END=1607029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr1 1607503 . C . PASS END=1607626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:37:0,81,1215:0,95,255:40,0 chr1 1607627 . T . PASS END=1607638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:28:0,63,942:0,64,255:26,0 chr1 1607817 . C . PASS END=1607826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 1607827 . G . PASS END=1607827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:7,0 chr1 1607828 . G . PASS END=1607845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 1607846 . G . PASS END=1607846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 1607847 . A . PASS END=1607851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1607852 . A . PASS END=1607852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr1 1607853 . T . PASS END=1607853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 1607854 . G . LowGQ END=1607854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:7,0 chr1 1607855 . T . PASS END=1607869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,250:8,0 chr1 1607870 . A . PASS END=1607870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 1607871 . G . PASS END=1607875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 1607876 . C . PASS END=1607885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 1607886 . A . PASS END=1607886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 1607887 . G . PASS END=1607888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 1607889 . A . PASS END=1607889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 1607890 . G . PASS END=1607904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 1607905 . G . PASS END=1607906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 1607907 . A . PASS END=1607909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 1607910 . G . PASS END=1607910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 1607911 . C . PASS END=1607947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 1607948 . A . LowDepth;LowGQ END=1608138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:3,0 chr1 1634346 . T . LowDepth;LowGQ END=1634438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1634519 . C . LowDepth;LowGQ END=1634667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1634668 . C . LowDepth END=1634708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 1634915 . T . PASS END=1634931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,488:0,39,255:13,0 chr1 1634932 . G . PASS END=1634946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,508:0,42,255:17,0 chr1 1634947 . C . PASS END=1634950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 1634951 . G . PASS END=1634959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 1634960 . C . PASS END=1634964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1634965 . G . PASS END=1634971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1634972 . T . PASS END=1634988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,693:0,60,255:26,0 chr1 1634989 . G . PASS END=1635003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 1635004 . T C, 7.19 DRAGENSnpHardQUAL DP=27;MQ=111.47;MQRankSum=-3.277;ReadPosRankSum=3.402;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,5,0:0.185,0.000:27:12,3,0:10,2,0:7:41,0,44,144,144,144:113,0,255:22,0:7.1910e+00,9.2027e-01,4.8420e+01,1.4541e+02,1.8018e+02,1.4842e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,7,5,0:13,9,3,2:1635004 chr1 1635005 . T . PASS END=1635010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 1635011 . A G, 7.19 DRAGENSnpHardQUAL DP=28;MQ=109.47;MQRankSum=-2.999;ReadPosRankSum=3.419;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,5,0:0.179,0.000:28:13,3,0:10,2,0:7:41,0,44,144,144,144:110,0,255:23,0:7.1910e+00,9.2027e-01,4.8420e+01,1.4541e+02,1.8018e+02,1.4842e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,7,5,0:14,9,3,2:1635004 chr1 1635012 . C . PASS END=1635021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr1 1635022 . A G, 15.85 PASS DP=30;MQ=106.52;MQRankSum=-3.292;ReadPosRankSum=2.618;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,6,0:0.200,0.000:30:13,3,0:11,3,0:16:51,0,48,215,821,1036:142,0,255:23,0:1.5847e+01,1.1454e-01,5.0615e+01,2.1472e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,5,1:9,15,4,2 chr1 1635023 . C . PASS END=1635045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,979:0,87,255:29,0 chr1 1635046 . A . PASS END=1635046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1635047 . C . PASS END=1635052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1635053 . G . PASS END=1635062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 1635063 . C . PASS END=1635063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 1635263 . C . PASS END=1635379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1185:0,86,255:40,0 chr1 1635478 . C . PASS END=1635527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,108,1468:0,113,255:40,0 chr1 1635528 . C . PASS END=1635564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,143,255:40,0 chr1 1635565 . C T, 47.15 PASS DP=56;MQ=137.77;MQRankSum=-2.571;ReadPosRankSum=5.604;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,25,0:0.446,0.000:56:19,13,0:12,12,0:46:82,0,50,886,1108,1995:255,0,255:30,0:4.7149e+01,1.0587e-04,5.2900e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,9,15,10:18,13,11,14 chr1 1635566 . G . PASS END=1635585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,135,255:40,0 chr1 1635662 . C . PASS END=1635783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:40:0,96,1526:0,96,255:40,0 chr1 1635989 . C . PASS END=1636043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,104,1457:0,104,255:40,0 chr1 1636044 . G A, 30.94 PASS DP=47;MQ=68.98;MQRankSum=-3.175;ReadPosRankSum=-2.222;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,14,0:0.298,0.000:47:16,8,0:17,6,0:31:66,0,43,166,166,166:255,0,255:30,0:3.0937e+01,3.6048e-03,4.6254e+01,1.6571e+02,2.0048e+02,1.6872e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,16,8,6:20,13,8,6 chr1 1636045 . T . PASS END=1636052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,105,1497:0,105,255:40,0 chr1 1636053 . C . PASS END=1636053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:40,0 chr1 1636054 . A . PASS END=1636090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1438:0,87,255:40,0 chr1 1636091 . T . PASS END=1636091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1226:0,70,255:34,0 chr1 1636092 . C . PASS END=1636094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,103,255:34,0 chr1 1636343 . T . PASS END=1636343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,962:0,53,255:26,0 chr1 1636344 . C . PASS END=1636346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 1636347 . A . PASS END=1636347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,899:0,64,255:26,0 chr1 1636348 . C . PASS END=1636348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 1636349 . G . PASS END=1636349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1636350 . G . PASS END=1636354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1636355 . A G, 0.08 DRAGENSnpHardQUAL DP=29;MQ=53.07;MQRankSum=-2.858;ReadPosRankSum=2.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:24,5,0:0.172,0.000:29:10,3,0:14,2,0:17:18,0,43,179,821,1000:107,0,255:23,0:8.4064e-02,1.7174e+01,6.3549e+01,1.9593e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,7,0,5:9,15,2,3 chr1 1636356 . A . PASS END=1636356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1636357 . T . PASS END=1636357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 1636358 . G . PASS END=1636359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 1636360 . T . PASS END=1636360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 1636361 . G . PASS END=1636399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1088:0,90,255:36,0 chr1 1636400 . G A, 0.02 DRAGENSnpHardQUAL DP=37;MQ=49.55;MQRankSum=-2.658;ReadPosRankSum=1.504;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:31,6,0:0.162,0.000:37:11,4,0:20,2,0:24:11,0,43,215,1109,1323:121,0,255:31,0:1.7342e-02,2.3995e+01,7.0370e+01,2.3851e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,0,6:17,14,2,4 chr1 1636401 . G . PASS END=1636437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1266:0,81,255:37,0 chr1 1636438 . T . PASS END=1636443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 1636444 . G . PASS END=1636444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 1636445 . C . PASS END=1636448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 1636449 . A . PASS END=1636449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 1636450 . G . PASS END=1636451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1636452 . G . PASS END=1636452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:26,0 chr1 1636453 . C . PASS END=1636454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1636455 . A . PASS END=1636464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 1637081 . C . PASS END=1637108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 1637109 . C . LowGQ END=1637109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 1637110 . A . PASS END=1637144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr1 1637145 . C . PASS END=1637145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 1637146 . T . PASS END=1637171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:6,0 chr1 1638848 . C . PASS END=1638876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:26,0 chr1 1638877 . C . PASS END=1638887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 1638888 . T . PASS END=1638889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 1638890 . G . PASS END=1638890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1638891 . A . PASS END=1638912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 1638913 . C . PASS END=1638913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 1638914 . G . PASS END=1638914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 1638915 . G . PASS END=1638917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1638918 . A . PASS END=1638924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 1638925 . C T, 31.60 PASS DP=28;MQ=46.76;MQRankSum=2.110;ReadPosRankSum=2.212;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,8,0:0.286,0.000:28:10,5,0:10,3,0:32:66,0,45,257,715,973:204,0,255:19,0:3.1604e+01,3.0756e-03,4.7753e+01,2.5733e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,2,6:10,10,5,3 chr1 1638926 . G . PASS END=1638941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1014:0,68,255:26,0 chr1 1638942 . C . PASS END=1638943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 1638944 . G . PASS END=1638961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,762:0,63,255:21,0 chr1 1638962 . A . PASS END=1638962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 1638963 . C . PASS END=1638988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,598:0,45,255:18,0 chr1 1638989 . C . PASS END=1638993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 1638994 . C . PASS END=1638994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:11,0 chr1 1638995 . G . PASS END=1639002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,449:0,33,255:12,0 chr1 1639003 . G . PASS END=1639016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 1639017 . T . PASS END=1639017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 1639018 . C . PASS END=1639023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 1639619 . C . PASS END=1639626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1258:0,92,255:35,0 chr1 1639627 . A . PASS END=1639627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:31,0 chr1 1639628 . G . PASS END=1639646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1175:0,88,255:34,0 chr1 1639647 . T . PASS END=1639647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:30,0 chr1 1639648 . T . PASS END=1639649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1203:0,88,255:33,0 chr1 1639650 . T . PASS END=1639680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1103:0,82,255:32,0 chr1 1639681 . T . PASS END=1639684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 1640233 . C . LowDepth;LowGQ END=1640261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:0:1:0,0,16:0,0,16:3,0 chr1 1640262 . T . PASS END=1640279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 1640280 . T . LowGQ END=1640280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 1640281 . C . PASS END=1640286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,164:6,0 chr1 1640287 . C . PASS END=1640301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 1640302 . C . PASS END=1640302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 1640303 . C . PASS END=1640312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:8,0 chr1 1640313 . G . PASS END=1640313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 1640314 . A . PASS END=1640315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 1640316 . T . LowGQ END=1640316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 1640317 . C . PASS END=1640320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:8,0 chr1 1640321 . A . PASS END=1640321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 1640322 . C . PASS END=1640322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 1640323 . T . PASS END=1640323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 1640324 . G . PASS END=1640324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr1 1640325 . G . LowGQ END=1640325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 1640326 . T . PASS END=1640327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 1640328 . C . PASS END=1640328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 1640329 . T . PASS END=1640335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:9,0 chr1 1640336 . C . PASS END=1640336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 1640337 . T . PASS END=1640341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 1640342 . C . PASS END=1640342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 1640343 . T . PASS END=1640345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 1640346 . T . PASS END=1640346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 1640347 . C . PASS END=1640348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 1640349 . T . PASS END=1640349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1640350 . C . PASS END=1640354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 1640355 . T . PASS END=1640355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr1 1640356 . C . PASS END=1640360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 1640361 . T . PASS END=1640361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:10,0 chr1 1640362 . C . PASS END=1640362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 1640363 . T . PASS END=1640363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 1640364 . T . PASS END=1640364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 1640365 . C . PASS END=1640366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 1640367 . T . PASS END=1640367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 1640368 . C . PASS END=1640371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1640372 . A . PASS END=1640372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 1640373 . G . PASS END=1640374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1640375 . A . PASS END=1640375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1640376 . C . PASS END=1640376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1640377 . C . PASS END=1640377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 1640378 . T . PASS END=1640383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:11,0 chr1 1640384 . T . PASS END=1640384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 1640385 . G . PASS END=1640391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 1640477 . C . PASS END=1640485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr1 1640486 . A . PASS END=1640493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:5:0,9,135:0,15,164:3,0 chr1 1640494 . G . PASS END=1640572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 1640918 . A . LowDepth;LowGQ END=1641079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 1643703 . C . PASS END=1643722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 1643723 . T . PASS END=1643731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 1643732 . C . PASS END=1643732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 1643733 . G . PASS END=1643741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 1643742 . C . PASS END=1643778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 1643779 . C . PASS END=1643784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1643785 . C . PASS END=1643785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 1643786 . T . PASS END=1643796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 1643797 . G . PASS END=1643835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,451:0,39,255:13,0 chr1 1643836 . G . PASS END=1643838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 1643839 . C . PASS END=1643839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 1643840 . C . PASS END=1643845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 1643846 . A . PASS END=1643846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 1643847 . G . PASS END=1643863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,576:0,40,255:19,0 chr1 1643864 . C . PASS END=1643864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1643865 . C . PASS END=1643865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 1643866 . C . PASS END=1643866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 1647785 . C . PASS END=1647890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,131,255:40,0 chr1 1647891 . C . PASS END=1647917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:41:0,96,1440:0,107,255:40,0 chr1 1650767 . C . PASS END=1650769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,122,255:40,0 chr1 1650770 . C . PASS END=1650806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,153,255:40,0 chr1 1650807 . T C, 45.62 PASS DP=60;MQ=122.29;MQRankSum=0.690;ReadPosRankSum=0.720;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,25,0:0.417,0.000:60:23,12,0:12,13,0:43:80,0,44,180,180,180:255,0,255:35,0:4.5618e+01,2.0192e-04,4.7200e+01,1.8039e+02,2.1516e+02,1.8340e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,16,18,7:19,16,11,14 chr1 1650808 . C . PASS END=1650844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,135,255:40,0 chr1 1650845 . G A, 45.06 PASS DP=66;MQ=123.66;MQRankSum=0.417;ReadPosRankSum=2.308;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,27,0:0.409,0.000:66:25,14,0:14,13,0:44:80,0,49,965,1386,2351:255,0,255:38,0:4.5063e+01,1.6464e-04,5.1700e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,21,16,11:22,17,13,14 chr1 1650846 . A . PASS END=1650882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,146,255:40,0 chr1 1650883 . T . PASS END=1650894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,153,255:40,0 chr1 1653035 . C . PASS END=1653065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1597:0,111,255:40,0 chr1 1653066 . G . PASS END=1653142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1178:0,83,255:40,0 chr1 1653143 . T . PASS END=1653143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:27,0 chr1 1653144 . C . PASS END=1653144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 1653145 . A . PASS END=1653150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,74,255:27,0 chr1 1654027 . C . PASS END=1654035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,121,255:40,0 chr1 1654147 . A . PASS END=1654238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:44:0,98,1530:0,98,255:40,0 chr1 1654239 . A . PASS END=1654239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:33,0 chr1 1654240 . G . PASS END=1654240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1590:0,94,255:34,0 chr1 1654241 . T . PASS END=1654241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,0 chr1 1654242 . C . PASS END=1654257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,110,255:37,0 chr1 1656853 . T . PASS END=1656861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:82:0,120,1800:0,238,255:40,0 chr1 1663894 . T . PASS END=1663900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1663901 . G . PASS END=1663907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 1663908 . G . PASS END=1663921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 1663922 . A . PASS END=1663922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 1663923 . G . PASS END=1663952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 1663953 . C . PASS END=1663953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 1663954 . C . PASS END=1663962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 1666129 . C . PASS END=1666137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,635:0,51,255:17,0 chr1 1666138 . A . PASS END=1666144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 1666145 . A . PASS END=1666145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 1666146 . G . PASS END=1666160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,729:0,57,255:19,0 chr1 1666161 . G . PASS END=1666174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,854:0,66,255:24,0 chr1 1666175 . C T, 12.35 PASS DP=24;MQ=40.74;MQRankSum=-0.355;ReadPosRankSum=1.137;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,5,0:0.208,0.000:24:8,3,0:11,2,0:12:47,0,45,179,651,830:114,0,255:19,0:1.2349e+01,2.6058e-01,4.8011e+01,1.7923e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,2,3:13,6,4,1 chr1 1666176 . G . PASS END=1666187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 1666188 . G . PASS END=1666209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:32,0 chr1 1666210 . A . PASS END=1666210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 1666211 . G . PASS END=1666250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1216:0,83,255:35,0 chr1 1666251 . G A, 4.95 DRAGENSnpHardQUAL DP=35;MQ=51.50;MQRankSum=-0.810;ReadPosRankSum=2.429;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,6,0:0.171,0.000:35:14,4,0:15,2,0:5:38,0,47,215,1037,1251:163,0,255:25,0:4.9510e+00,1.6738e+00,5.1774e+01,2.1618e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,21,3,3:13,16,5,1 chr1 1666252 . C . PASS END=1666263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1170:0,83,255:30,0 chr1 1666264 . A . PASS END=1666265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:25,0 chr1 1666266 . T . PASS END=1666266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:25,0 chr1 1666267 . G . PASS END=1666274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:26,0 chr1 1669760 . C . PASS END=1669765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr1 1669766 . A . PASS END=1669766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 1669767 . C . PASS END=1669776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 1669777 . A . PASS END=1669779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 1669780 . A . PASS END=1669780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:19,0 chr1 1669781 . T . PASS END=1669781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 1669782 . C . PASS END=1669782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1669783 . C . PASS END=1669785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 1669786 . G . PASS END=1669794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:18,0 chr1 1669795 . A . PASS END=1669795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 1669796 . C . PASS END=1669800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 1669801 . A . PASS END=1669804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,634:0,60,255:20,0 chr1 1669805 . T . PASS END=1669825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 1669826 . T . PASS END=1669826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,590:0,26,255:17,0 chr1 1669827 . C . PASS END=1669859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,588:0,48,255:17,0 chr1 1669860 . G . PASS END=1669869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:12,0 chr1 1669870 . A . PASS END=1669870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 1669871 . A . PASS END=1669871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 1669872 . A . PASS END=1669880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 1669881 . T . PASS END=1669882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1669883 . C . PASS END=1669887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1670361 . C . PASS END=1670431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:37:0,90,1327:0,90,255:40,0 chr1 1670432 . T . LowGQ END=1670432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:0:63:0,0,2055:4,0,255:40,0 chr1 1670433 . A . PASS END=1670496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:41:0,96,1440:0,123,255:40,0 chr1 1670675 . C . PASS END=1670679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,186:3,0 chr1 1670680 . A . PASS END=1670705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 1670706 . C . PASS END=1670708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,149:3,0 chr1 1670709 . G . PASS END=1670743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:5,0 chr1 1670744 . A . LowGQ END=1670744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 1670745 . G . PASS END=1670749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 1670750 . A . LowGQ END=1670750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,2:5:0:5:0,0,61:18,0,79:3,0 chr1 1670751 . C . PASS END=1670754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:5,0 chr1 1670755 . A . LowGQ END=1670755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 1670756 . G . PASS END=1670808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 1670809 . A . LowGQ END=1670809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1670810 . C . PASS END=1670816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 1670817 . C . LowGQ END=1670895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,22:0,0,33:3,0 chr1 1670896 . C . PASS END=1670903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 1670904 . A . LowGQ END=1670904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1670905 . G . PASS END=1670911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:4,0 chr1 1670912 . A . LowGQ END=1670912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr1 1670913 . G . PASS END=1670920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 1670921 . G . LowGQ END=1670921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 1670922 . C . PASS END=1670931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 1670932 . T . LowGQ END=1670932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr1 1670933 . T . PASS END=1670957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 1670958 . C G, 13.83 PASS DP=5;MQ=14.00;MQRankSum=1.231;ReadPosRankSum=1.231;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,2,0:0.400,0.000:5:1,0,0:2,2,0:12:48,0,14,72,107,179:62,0,101:3,0:1.3832e+01,2.6934e-01,1.7269e+01,7.1827e+01,1.4230e+02,1.8209e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,0,2,0:1,2,0,2 chr1 1670959 . A . PASS END=1670985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:5,0 chr1 1670986 . G . LowGQ END=1670995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,78:0,0,82:3,0 chr1 1670996 . T . PASS END=1670996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 1684343 . C . PASS END=1684344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:22:0,30,585:0,30,255:13,0 chr1 1684345 . A . PASS END=1684346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,53,255:14,0 chr1 1684347 . CCCT C,CCCTCCT, 48.12 PASS DP=23;MQ=248.04;MQRankSum=3.194;ReadPosRankSum=-0.341;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:13,2,8,0:0.087,0.348,0.000:23:6,1,5,0:7,1,3,0:46:58,172,199,0,142,47,299,299,299,299:244,0,255:13,13:4.8121e+01,1.7227e+02,2.0248e+02,1.1028e-04,1.5248e+02,5.0000e+01,3.2424e+02,3.3424e+02,3.3424e+02,3.2725e+02:0.00,10.00,13.01,10.00,20.00,13.01,34.77,44.77,44.77,37.78:9,4,5,5:8,5,7,3 chr1 1684348 . C . LowGQ END=1684350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,11:25:0:25:0,0,106:46,0,255:22,3 chr1 1684351 . C . PASS END=1684351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:23,0 chr1 1684352 . C . PASS END=1684373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:25,1 chr1 1684374 . T . PASS END=1684374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 1684375 . C . PASS END=1684377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 1684378 . A . PASS END=1684378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:23,0 chr1 1684379 . G . PASS END=1684401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,893:0,61,255:25,0 chr1 1684402 . T . PASS END=1684431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,854:0,61,255:24,0 chr1 1684432 . A . PASS END=1684432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:20,0 chr1 1684433 . C . PASS END=1684433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 1684434 . C . PASS END=1684434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 1684435 . A . PASS END=1684435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1684436 . G . PASS END=1684436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 1684437 . T . PASS END=1684437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 1684438 . C . PASS END=1684438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,717:0,30,255:22,0 chr1 1684439 . G . PASS END=1684455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,779:0,69,255:23,0 chr1 1684456 . C . PASS END=1684458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,50,255:18,0 chr1 1684459 . A . PASS END=1684471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:14:0,36,540:0,42,255:13,0 chr1 1684472 . C T, 5.77 DRAGENSnpHardQUAL DP=14;MQ=250.00;MQRankSum=2.073;ReadPosRankSum=1.086;FractionInformativeReads=0.929;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,2,0:0.154,0.000:13:5,1,0:6,1,0:6:39,0,50,71,336,407:52,0,255:9,0:5.7709e+00,1.3360e+00,5.4336e+01,7.2747e+01,3.7202e+02,4.1166e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,1,1:7,4,2,0 chr1 1684473 . G . PASS END=1684490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:10:0,22,360:0,22,255:9,0 chr1 1684491 . A . PASS END=1684491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 1684492 . T . PASS END=1684499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 1685006 . C . PASS END=1685017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 1685018 . C . PASS END=1685018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 1685019 . G . PASS END=1685088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1156:0,83,255:40,0 chr1 1685490 . C . PASS END=1685505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,637:0,40,255:19,0 chr1 1685506 . G . PASS END=1685513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:22,0 chr1 1685514 . C . PASS END=1685514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 1685515 . A . PASS END=1685516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 1685517 . G . PASS END=1685517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 1685518 . A . PASS END=1685528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,945:0,62,255:24,0 chr1 1685529 . G . PASS END=1685529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:24,0 chr1 1685530 . G . PASS END=1685537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 1685538 . G . PASS END=1685538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 1685539 . T . PASS END=1685544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 1685545 . C . PASS END=1685545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 1685546 . A . PASS END=1685556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:24,0 chr1 1685557 . A . PASS END=1685557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 1685558 . T . PASS END=1685577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,892:0,69,255:23,0 chr1 1685578 . G . PASS END=1685601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,46,255:18,1 chr1 1685602 . G . PASS END=1685616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,482:0,39,255:13,0 chr1 1685617 . G . PASS END=1685619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 1685620 . C . PASS END=1685630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1685631 . G . PASS END=1685631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 1685632 . G . PASS END=1685633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1685634 . G . PASS END=1685637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,604:0,45,255:16,0 chr1 1685638 . A . PASS END=1685638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 1685639 . C . PASS END=1685647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,613:0,51,255:17,0 chr1 1685723 . C . PASS END=1685731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 1685732 . G . PASS END=1685822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1057:0,87,255:36,0 chr1 1685983 . C . PASS END=1685994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,111,1360:0,111,255:39,0 chr1 1685995 . G . PASS END=1686137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:38:0,82,1443:0,82,255:40,0 chr1 1686813 . C . PASS END=1686867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1127:0,87,255:37,0 chr1 1686868 . G . PASS END=1686868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:31,0 chr1 1686869 . A . PASS END=1686873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,98,255:32,0 chr1 1686874 . C . PASS END=1686874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:30,0 chr1 1686875 . A . PASS END=1686877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 1686878 . G . PASS END=1686878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:31,0 chr1 1686879 . A . PASS END=1686883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1200:0,83,255:32,0 chr1 1686884 . A . PASS END=1686884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1104:0,65,255:28,0 chr1 1686885 . G . PASS END=1686887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:30,0 chr1 1686888 . G . PASS END=1686888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr1 1686889 . G . PASS END=1686893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:30,0 chr1 1686894 . C . PASS END=1686898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1056:0,76,255:28,0 chr1 1686899 . A . PASS END=1686899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:24,0 chr1 1686900 . C . PASS END=1686915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:23:0,60,900:0,62,255:22,0 chr1 1687697 . C . PASS END=1687782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:52:0,120,1800:0,135,255:40,0 chr1 1687942 . C . PASS END=1687943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1225:0,86,255:33,0 chr1 1687944 . T . PASS END=1687944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1142:0,71,255:32,0 chr1 1687945 . C . PASS END=1688053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:37:0,95,1262:0,95,255:40,0 chr1 1688054 . G . PASS END=1688054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:33,0 chr1 1688055 . C . PASS END=1688071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:33:0,90,1350:0,99,255:34,0 chr1 1688072 . C . PASS END=1688072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr1 1688073 . A . PASS END=1688081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:30,0 chr1 1688082 . G . PASS END=1688096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:26,0 chr1 1688277 . T . PASS END=1688285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 1688286 . G . PASS END=1688295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 1688296 . G . PASS END=1688310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr1 1688311 . C . PASS END=1688311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:23,0 chr1 1688312 . G . PASS END=1688314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 1688315 . T . PASS END=1688315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,821:0,33,255:22,0 chr1 1688316 . G . PASS END=1688320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 1688321 . T . PASS END=1688321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 1688546 . G . PASS END=1688553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 1688554 . G . PASS END=1688555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1688556 . T . PASS END=1688557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 1688558 . T . PASS END=1688558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1688559 . G . PASS END=1688559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 1688560 . G . PASS END=1688570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 1688571 . C . PASS END=1688571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 1688572 . C . PASS END=1688575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 1688576 . A . PASS END=1688585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 1688586 . C . LowGQ END=1688587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,11:28:0:28:0,0,447:0,0,255:20,0 chr1 1688588 . C . PASS END=1688591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,990:0,67,255:22,0 chr1 1688592 . A . LowGQ END=1688594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,9:28:0:28:0,0,386:44,0,255:18,0 chr1 1688595 . C . PASS END=1688599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 1688600 . T . LowGQ END=1688601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,568:29,0,255:22,0 chr1 1688602 . C . PASS END=1688603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:31:0,60,994:0,60,255:24,0 chr1 1688604 . C . PASS END=1688607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,88,255:28,0 chr1 1688608 . T . LowGQ END=1688609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:35:0,0,648:41,0,255:28,0 chr1 1688610 . C . PASS END=1688613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,108,255:30,0 chr1 1688614 . G . LowGQ END=1688614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,9:37:0:37:0,0,706:208,0,255:27,0 chr1 1688615 . C . PASS END=1688615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 1688616 . G . LowGQ END=1688618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,8:37:0:37:0,0,873:0,0,255:32,0 chr1 1688619 . C . PASS END=1688620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 1688621 . T . LowGQ END=1688621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,7:43:0:43:0,0,1244:1,0,255:33,0 chr1 1688622 . C . PASS END=1688623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,108,1620:0,129,255:37,0 chr1 1688624 . A . LowGQ END=1688624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:0:44:0,0,1255:4,0,255:35,0 chr1 1688625 . T . PASS END=1688625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:11:44:0,11,1274:0,11,255:35,0 chr1 1688626 . G . PASS END=1688626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:54:44:0,54,1445:0,54,255:37,0 chr1 1688627 . A . PASS END=1688633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:44:0,82,1403:0,82,255:40,0 chr1 1688634 . T . PASS END=1688634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1402:0,79,255:39,0 chr1 1688635 . G . PASS END=1688636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 1688637 . A . PASS END=1688677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:36:0,87,1234:0,87,255:40,0 chr1 1688678 . T . PASS END=1688679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:35:0,72,1148:0,72,255:34,0 chr1 1688680 . C . PASS END=1688694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1144:0,86,255:34,0 chr1 1688695 . G . PASS END=1688695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:30,0 chr1 1688696 . C . PASS END=1688706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:31:0,85,1038:0,85,255:31,0 chr1 1688707 . C . PASS END=1688734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 1688735 . G . PASS END=1688742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:17,0 chr1 1688743 . A . PASS END=1688743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:14,0 chr1 1688744 . A . PASS END=1688748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 1688749 . C . PASS END=1688749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1689804 . C . PASS END=1689815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:19,0 chr1 1689816 . T . PASS END=1689817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 1689818 . A . PASS END=1689818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 1689819 . C . PASS END=1689855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:26,0 chr1 1689856 . G . PASS END=1689929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1001:0,84,255:31,0 chr1 1689930 . C . PASS END=1689968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,884:0,69,255:26,0 chr1 1689969 . A . PASS END=1689970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 1690540 . C . PASS END=1690562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 1690563 . T . PASS END=1690563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 1690564 . C . PASS END=1690610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 1690611 . G . PASS END=1690639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,839:0,66,255:25,0 chr1 1690640 . G . PASS END=1690640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 1690641 . T . PASS END=1690641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:19,0 chr1 1690642 . G . PASS END=1690642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 1690643 . T . PASS END=1690643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:19,0 chr1 1690644 . G . PASS END=1690644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 1690645 . T . PASS END=1690646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr1 1690647 . A . PASS END=1690655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1690656 . C . PASS END=1690656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 1690657 . A . PASS END=1690660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 1690661 . C . PASS END=1690661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 1690662 . C . PASS END=1690662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 1690663 . T . PASS END=1690663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 1690664 . C . PASS END=1690665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 1690666 . A . PASS END=1690666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 1690667 . C . PASS END=1690675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 1690676 . G . PASS END=1690676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:18,0 chr1 1690677 . G . PASS END=1690681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 1690682 . C . PASS END=1690682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1691173 . C . PASS END=1691177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 1691178 . C . PASS END=1691178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1691179 . C . PASS END=1691196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 1691197 . G . PASS END=1691212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 1691213 . G . PASS END=1691213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 1691214 . G . PASS END=1691235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:15:0,44,566:0,44,255:19,0 chr1 1691236 . T . PASS END=1691245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 1691246 . G . PASS END=1691246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 1691247 . G . PASS END=1691249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 1691250 . G . PASS END=1691250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1691251 . A . PASS END=1691253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1691254 . A . PASS END=1691254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 1691255 . T . PASS END=1691258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 1691259 . C . PASS END=1691259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 1691260 . C . PASS END=1691329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:24,0 chr1 1691330 . A . PASS END=1691336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:18,0 chr1 1691337 . T . PASS END=1691337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:17,0 chr1 1691338 . G . PASS END=1691341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:17,0 chr1 1693330 . A . PASS END=1693330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1693331 . T . PASS END=1693331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 1693391 . A . PASS END=1693455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1260:0,90,255:40,0 chr1 1693456 . A . PASS END=1693456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 1693457 . T . PASS END=1693460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1693461 . G . PASS END=1693474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,917:0,67,255:26,0 chr1 1696667 . C . PASS END=1696669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 1696670 . A . PASS END=1696670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 1696671 . A . PASS END=1696681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 1696682 . C . PASS END=1696682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 1696683 . T . PASS END=1696683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 1696684 . C . PASS END=1696686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1696687 . C . PASS END=1696688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 1696689 . G . PASS END=1696696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 1696697 . G . PASS END=1696725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:19,0 chr1 1696726 . G . PASS END=1696762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,792:0,63,255:26,0 chr1 1696763 . C . PASS END=1696763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 1696764 . C . PASS END=1696819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 1696820 . G . PASS END=1696845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,714:0,57,255:19,0 chr1 1718770 . T . PASS END=1718771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 1718772 . A . PASS END=1718772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:29,0 chr1 1718773 . G . PASS END=1718876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:33:0,82,1371:0,82,255:40,0 chr1 1720492 . C . PASS END=1720495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 1720496 . C . PASS END=1720498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 1720499 . G . PASS END=1720499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 1720500 . T . PASS END=1720512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,496:0,42,255:18,0 chr1 1720513 . C . PASS END=1720513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:17,0 chr1 1720514 . A . PASS END=1720521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 1720522 . C . PASS END=1720525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1720526 . G . PASS END=1720526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1720527 . C . PASS END=1720529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:23,0 chr1 1720530 . T . PASS END=1720531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:22,0 chr1 1720532 . G . PASS END=1720549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,906:0,72,255:26,0 chr1 1720550 . A . PASS END=1720550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:25,0 chr1 1720551 . A . PASS END=1720556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 1720557 . A . PASS END=1720557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 1720558 . G . PASS END=1720558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1720559 . G . PASS END=1720559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 1720560 . C . PASS END=1720564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 1720565 . G . PASS END=1720565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 1720566 . C . PASS END=1720582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,926:0,70,255:26,0 chr1 1720583 . A . PASS END=1720583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr1 1720584 . G . PASS END=1720585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1720586 . G . PASS END=1720587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1720588 . T . PASS END=1720590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1720591 . T . PASS END=1720591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,889:0,34,255:23,0 chr1 1720592 . C . PASS END=1720592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:25,0 chr1 1720593 . C . PASS END=1720621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,993:0,80,255:30,0 chr1 1720622 . C . PASS END=1720622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 1720623 . A . PASS END=1720628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 1720629 . T . PASS END=1720629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 1720630 . C . PASS END=1720634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 1720635 . T . PASS END=1720635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 1720636 . C . PASS END=1720649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 1720650 . A . PASS END=1720650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:28,0 chr1 1720651 . A . PASS END=1720652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:29,0 chr1 1720653 . A . PASS END=1720653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1720654 . G . PASS END=1720675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:29,0 chr1 1720676 . G . PASS END=1720676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 1720677 . C . PASS END=1720679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 1720680 . G . PASS END=1720709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 1721834 . G . PASS END=1721837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,824:0,72,255:24,0 chr1 1721838 . A . PASS END=1721838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,750:0,58,255:24,0 chr1 1721839 . T . PASS END=1721859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,826:0,71,255:26,0 chr1 1721860 . G . PASS END=1721860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 1721861 . G . PASS END=1721862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1061:0,60,255:28,0 chr1 1721863 . C . PASS END=1721875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1197:0,96,255:34,0 chr1 1721876 . C . PASS END=1721876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr1 1721877 . C . PASS END=1721903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1349:0,98,255:40,0 chr1 1721904 . A . PASS END=1721904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1472:0,74,255:37,0 chr1 1721905 . G . PASS END=1722015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:40:0,92,1451:0,92,255:40,0 chr1 1722016 . T . PASS END=1722016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1332:0,79,255:36,0 chr1 1722017 . C . PASS END=1722035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,86,255:39,0 chr1 1724684 . C . PASS END=1724750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:32:0,93,1144:0,96,255:39,0 chr1 1735858 . C . PASS END=1735858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 1735859 . T . PASS END=1735860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 1735861 . T . PASS END=1735861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,990:0,43,255:27,0 chr1 1735862 . G . PASS END=1735977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1174:0,83,255:37,0 chr1 1735978 . C . PASS END=1735978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:38:0,78,1170:0,98,255:26,0 chr1 1735979 . A . PASS END=1735980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 1735981 . A . PASS END=1735993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:26,0 chr1 1735994 . G . PASS END=1736010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,50,255:18,0 chr1 1736011 . T . PASS END=1736020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr1 1737914 . C . PASS END=1737977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:33:0,96,1382:0,99,255:40,0 chr1 1747195 . C . PASS END=1747200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1747201 . T . PASS END=1747201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 1747202 . C . PASS END=1747216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:30,0 chr1 1747217 . T . PASS END=1747218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1086:0,60,255:30,0 chr1 1747219 . G . PASS END=1747230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:33:0,99,1235:0,99,255:36,0 chr1 1747231 . G . PASS END=1747231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 1747232 . C . PASS END=1747239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1274:0,91,255:35,0 chr1 1747240 . C . PASS END=1747240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:30,0 chr1 1747241 . C . PASS END=1747267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,86,255:32,0 chr1 1747268 . G . PASS END=1747268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:27,0 chr1 1747269 . G . PASS END=1747269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 1747270 . A . PASS END=1747288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,1000:0,68,255:26,0 chr1 1747289 . T . PASS END=1747289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 1747290 . G . PASS END=1747291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 1747292 . T . PASS END=1747292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:24,0 chr1 1747293 . G . PASS END=1747293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 1747294 . T . PASS END=1747294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,732:0,58,255:24,0 chr1 1747295 . T . PASS END=1747301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 1749276 . C . PASS END=1749314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,118,1800:0,118,255:40,0 chr1 1756836 . T . PASS END=1756892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,108,1588:0,114,255:40,0 chr1 1822508 . A . PASS END=1822520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 1822521 . G . PASS END=1822533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 1822534 . G . LowGQ END=1822534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 1822535 . C . PASS END=1822606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,164:6,0 chr1 1822607 . A . LowGQ END=1822607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 1822608 . C . PASS END=1822660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:6,0 chr1 1822661 . C . PASS END=1822662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr1 1822663 . G . PASS END=1822667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr1 1822668 . A . PASS END=1822668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,149:0,4,149:4,0 chr1 1822669 . A . PASS END=1822724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr1 1822725 . G . PASS END=1822742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 1822743 . G . PASS END=1822743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 1822744 . G . PASS END=1822749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,235:7,0 chr1 1822750 . G . PASS END=1822750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 1822751 . G . PASS END=1822772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 1822773 . A . PASS END=1822773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr1 1822774 . G . PASS END=1822780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 1822781 . T . PASS END=1822822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr1 1823339 . G . PASS END=1823342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1823343 . G . PASS END=1823347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 1823348 . C . PASS END=1823353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1823354 . A . PASS END=1823354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 1823355 . A . PASS END=1823370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 1823371 . A . PASS END=1823371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 1823372 . T . PASS END=1823394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,620:0,48,255:19,0 chr1 1823395 . G . PASS END=1823410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 1823411 . C . PASS END=1823413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1823414 . G . PASS END=1823452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr1 1823453 . C . PASS END=1823453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 1823454 . T . PASS END=1823459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,885:0,72,255:25,0 chr1 1823460 . T . PASS END=1823460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1823461 . C . PASS END=1823461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 1823462 . C . PASS END=1823470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1823471 . C . PASS END=1823471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:26,0 chr1 1823472 . G . PASS END=1823481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1823482 . C . PASS END=1823484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1108:0,74,255:26,0 chr1 1823485 . G . PASS END=1823560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1260:0,89,255:35,0 chr1 1823561 . G . PASS END=1823563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1131:0,63,255:33,1 chr1 1823564 . T . PASS END=1823791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1194:0,81,255:40,0 chr1 1846720 . A . PASS END=1846727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,119,1772:0,119,255:40,0 chr1 1846728 . T . PASS END=1846764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:51:0,101,1748:0,101,255:40,0 chr1 1846765 . G A, 50.00 PASS DP=57;MQ=250.00;MQRankSum=6.465;ReadPosRankSum=3.109;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,30,0:0.526,0.000:57:15,16,0:12,14,0:48:85,0,50,1028,962,1990:255,0,255:26,0:5.0000e+01,6.6269e-05,5.2796e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,13,8,22:8,19,12,18 chr1 1846766 . G . PASS END=1846802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,146,255:40,0 chr1 1846803 . C . PASS END=1846812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:46:0,120,1800:0,128,255:40,0 chr1 1847124 . C . PASS END=1847125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 1847126 . G . PASS END=1847126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 1847127 . C . PASS END=1847132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr1 1847133 . T . PASS END=1847135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 1847136 . C . PASS END=1847150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,947:0,67,255:27,0 chr1 1847151 . T . PASS END=1847151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:24,0 chr1 1847152 . C . PASS END=1847174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:26,0 chr1 1847880 . A . PASS END=1847880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 1847881 . C . PASS END=1847883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr1 1847884 . A . PASS END=1847884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 1847885 . G . PASS END=1847888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 1847889 . C . PASS END=1847889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 1847890 . T . PASS END=1847893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 1847894 . G . PASS END=1847903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:19,0 chr1 1847904 . A . PASS END=1847905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1847906 . C . PASS END=1847908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr1 1847909 . G . PASS END=1847910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1847911 . A . PASS END=1847911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:19,0 chr1 1847912 . G . PASS END=1847913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 1847914 . A . PASS END=1847914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 1847915 . C . PASS END=1847922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,909:0,64,255:26,0 chr1 1847923 . T . PASS END=1847924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 1847925 . T . PASS END=1847925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 1847926 . T . PASS END=1847930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 1847931 . A . PASS END=1847931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,885:0,64,255:26,0 chr1 1847932 . T . PASS END=1847932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 1847933 . G . PASS END=1847933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 1847934 . T . PASS END=1847939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 1847940 . G . PASS END=1847940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 1847941 . A . PASS END=1847941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 1847942 . A . PASS END=1847943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 1847944 . A . PASS END=1847944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,929:0,65,255:25,0 chr1 1847945 . G . PASS END=1847946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1847947 . G . PASS END=1847947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 1847948 . C . PASS END=1847949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1847950 . A . PASS END=1847956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr1 1847957 . G . PASS END=1847960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1847961 . A . PASS END=1847961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:26,0 chr1 1847962 . A . PASS END=1847963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1847964 . A . PASS END=1847965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,956:0,70,255:27,0 chr1 1847966 . G . PASS END=1847978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1080:0,84,255:31,0 chr1 1847979 . T C, 44.10 PASS DP=31;MQ=249.81;MQRankSum=3.695;ReadPosRankSum=3.860;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,11,0:0.355,0.000:31:8,3,0:12,8,0:44:79,0,50,365,679,1043:255,0,255:17,0:4.4100e+01,1.9078e-04,5.3000e+01,3.6465e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,8,5,6:10,10,3,8 chr1 1847980 . G . PASS END=1847985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 1847986 . T . PASS END=1847986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:28,0 chr1 1847987 . G . PASS END=1847989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1847990 . C . PASS END=1847991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:28,0 chr1 1847992 . T . PASS END=1847998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,997:0,87,255:29,0 chr1 1847999 . T . PASS END=1847999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 1848000 . A . PASS END=1848003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 1848004 . A . PASS END=1848005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,992:0,60,255:29,0 chr1 1848006 . C . PASS END=1848008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 1848009 . A . PASS END=1848009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 1848010 . C . PASS END=1848011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1848012 . A . PASS END=1848014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,987:0,73,255:26,0 chr1 1848015 . A . PASS END=1848015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,968:0,57,255:24,0 chr1 1848016 . G . PASS END=1848016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:25,0 chr1 1848017 . T . PASS END=1848018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1848019 . A . PASS END=1848021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:25,0 chr1 1848022 . T . PASS END=1848022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,876:0,51,255:23,0 chr1 1848023 . G . PASS END=1848023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:24,0 chr1 1848024 . G . PASS END=1848026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,80,255:24,0 chr1 1848027 . T . PASS END=1848027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:24,0 chr1 1848028 . C . PASS END=1848036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,886:0,61,255:24,0 chr1 1848037 . A . PASS END=1848037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,728:0,58,255:21,0 chr1 1848038 . G . PASS END=1848046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 1848047 . C . PASS END=1848049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr1 1848050 . A . PASS END=1848050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:18,0 chr1 1848051 . G . PASS END=1848052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,68,255:14,0 chr1 1848053 . C . PASS END=1848053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:15,0 chr1 1848054 . A . PASS END=1848054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:23:0,42,630:0,52,255:13,0 chr1 1848191 . A . PASS END=1848197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,114,1480:0,117,255:40,0 chr1 1848198 . G . PASS END=1848323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,3:66:99:42:0,100,1551:0,100,255:40,0 chr1 1848324 . G . PASS END=1848324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,11:67:18:67:0,18,1787:0,18,255:40,0 chr1 1848325 . A . PASS END=1848334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:57:0,120,1800:0,121,255:40,0 chr1 1848335 . A . PASS END=1848335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,6:57:71:57:0,71,1480:0,71,255:40,0 chr1 1848413 . G . PASS END=1848445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,105,1512:0,107,255:39,0 chr1 1848446 . C . PASS END=1848446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1349:0,70,255:36,0 chr1 1848447 . G . PASS END=1848513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:38:0,81,1169:0,81,255:40,0 chr1 1848586 . A . PASS END=1848610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:35:0,83,991:0,83,255:38,0 chr1 1848611 . G . PASS END=1848611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,88,255:26,0 chr1 1848612 . T . PASS END=1848613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:27,0 chr1 1848614 . C . PASS END=1848614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:26,0 chr1 1848615 . T . PASS END=1848624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1131:0,80,255:28,0 chr1 1848625 . T . PASS END=1848627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,895:0,67,255:26,0 chr1 1848628 . A . PASS END=1848628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:24,0 chr1 1848629 . G . PASS END=1848629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1848630 . T . PASS END=1848630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1848631 . A . PASS END=1848631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 1848632 . G . PASS END=1848632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1849321 . T . PASS END=1849329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 1849330 . A . PASS END=1849330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,447:0,26,255:12,0 chr1 1849331 . C . PASS END=1849332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1849333 . A . PASS END=1849333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:11,0 chr1 1849334 . G . PASS END=1849342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:14,0 chr1 1849343 . G . PASS END=1849343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 1849344 . G . PASS END=1849367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,531:0,41,255:19,0 chr1 1849368 . A . PASS END=1849371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,740:0,60,255:22,0 chr1 1849372 . C . PASS END=1849373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 1849374 . G . PASS END=1849378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:25,0 chr1 1849379 . A . PASS END=1849379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 1849380 . C . PASS END=1849404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 1849405 . C . PASS END=1849407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1849408 . A . PASS END=1849408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:26,0 chr1 1849409 . A . PASS END=1849417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1849418 . C . PASS END=1849418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:26,0 chr1 1849419 . T . PASS END=1849420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1849421 . G . PASS END=1849421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 1849422 . G . PASS END=1849424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 1849425 . T . PASS END=1849425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 1849426 . C . PASS END=1849430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1054:0,87,255:29,0 chr1 1849431 . A . PASS END=1849431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr1 1849432 . G . PASS END=1849432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 1849433 . A . PASS END=1849433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:29,0 chr1 1849434 . G . PASS END=1849442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 1849443 . C . PASS END=1849443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 1849444 . T . PASS END=1849467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1216:0,83,255:35,0 chr1 1849468 . G . PASS END=1849468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:32,0 chr1 1849469 . A . PASS END=1849473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1340:0,92,255:34,0 chr1 1849474 . T . PASS END=1849474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:33,0 chr1 1849475 . T . PASS END=1849486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1221:0,91,255:36,0 chr1 1849487 . G . PASS END=1849497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1335:0,95,255:35,0 chr1 1849498 . C . PASS END=1849498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:31,0 chr1 1849499 . G . PASS END=1849528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:34,0 chr1 1849529 . A G, 50.00 PASS DP=34;MQ=249.97;MQRankSum=4.359;ReadPosRankSum=2.729;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,21,0:0.618,0.000:34:6,7,0:7,14,0:45:85,0,43,185,185,185:255,0,255:11,0:5.0000e+01,1.4445e-04,4.6333e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,2,9,12:6,7,13,8:1849529 chr1 1849530 . T C, 46.33 PASS DP=34;MQ=249.97;MQRankSum=4.820;ReadPosRankSum=3.473;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:21,13,0:0.382,0.000:34:7,6,0:14,7,0:45:81,0,47,181,181,181:255,0,255:19,0:4.6333e+01,1.4445e-04,5.0000e+01,1.8110e+02,2.1587e+02,1.8411e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,12,11,2:13,8,6,7:1849529 chr1 1849531 . G . PASS END=1849552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:32,0 chr1 1849553 . A . PASS END=1849564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr1 1849565 . A . PASS END=1849571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 1849572 . T . PASS END=1849572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1849573 . G . PASS END=1849587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 1849588 . C . PASS END=1849588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr1 1849589 . A . PASS END=1849591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 1849592 . G . PASS END=1849594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 1849595 . C . PASS END=1849601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1849692 . A . PASS END=1849701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,659:0,41,255:19,0 chr1 1849702 . G . PASS END=1849702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1849703 . C . PASS END=1849706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:18,0 chr1 1849707 . G . PASS END=1849708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 1849709 . A . PASS END=1849711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 1849712 . G . PASS END=1849727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 1849728 . T . PASS END=1849728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 1849729 . A . PASS END=1849743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,764:0,63,255:24,0 chr1 1849744 . G A, 45.36 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=1.444;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,9,0:0.360,0.000:25:10,4,0:6,5,0:45:80,0,50,293,572,865:252,0,255:16,0:4.5359e+01,1.4807e-04,5.3000e+01,2.9295e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,4,5:9,7,5,4 chr1 1849745 . T . PASS END=1849749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,962:0,78,255:26,0 chr1 1849750 . G . PASS END=1849755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 1849756 . C . PASS END=1849765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1084:0,74,255:26,0 chr1 1849766 . G . PASS END=1849772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 1849773 . G . PASS END=1849774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1849775 . G . PASS END=1849777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1849778 . T . PASS END=1849781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 1849782 . C . PASS END=1849801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,71,255:26,0 chr1 1849802 . C . PASS END=1849802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 1849803 . A . PASS END=1849807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1849808 . A . PASS END=1849808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 1849809 . A . PASS END=1849829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,911:0,66,255:26,0 chr1 1849830 . C . PASS END=1849834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1849835 . C . PASS END=1849838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1849839 . G . PASS END=1849839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1849840 . C . PASS END=1849840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1849841 . A . PASS END=1849841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:24,0 chr1 1849842 . G . PASS END=1849843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 1849844 . A . PASS END=1849844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:23,0 chr1 1849845 . G . PASS END=1849861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,893:0,64,255:25,0 chr1 1849862 . A . PASS END=1849862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 1849863 . G . PASS END=1849863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1849864 . G . PASS END=1849864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 1849865 . A . PASS END=1849865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1849866 . T . PASS END=1849869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1070:0,74,255:26,0 chr1 1849870 . C . PASS END=1849875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 1849876 . A . PASS END=1849876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1849877 . G . PASS END=1849885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:34,0 chr1 1849886 . T . PASS END=1849922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:33:0,80,1241:0,80,255:35,0 chr1 1849923 . C A, 49.47 PASS DP=37;MQ=249.63;MQRankSum=4.556;ReadPosRankSum=3.825;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,17,0:0.459,0.000:37:12,6,0:8,11,0:48:84,0,50,608,715,1323:255,0,255:19,0:4.9473e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,6,11:11,9,11,6 chr1 1849924 . A . PASS END=1849960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1250:0,94,255:37,0 chr1 1849961 . G . PASS END=1849961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1230:0,62,255:30,0 chr1 1849962 . T . PASS END=1849976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1246:0,94,255:34,0 chr1 1849977 . G . PASS END=1849977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:28,0 chr1 1849978 . C . PASS END=1849991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:32,0 chr1 1849992 . C . PASS END=1849995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:25,0 chr1 1850332 . C . PASS END=1850335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1850336 . C . PASS END=1850339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 1850340 . C . PASS END=1850341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1850342 . A . PASS END=1850346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 1850347 . C . PASS END=1850356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,511:0,42,255:14,0 chr1 1850357 . G . PASS END=1850357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1850358 . G . PASS END=1850370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 1850371 . C . PASS END=1850373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1850480 . T . PASS END=1850519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,621:0,41,255:19,0 chr1 1850520 . A . PASS END=1850524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1850525 . C . PASS END=1850540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,47,255:19,0 chr1 1850541 . G . PASS END=1850541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 1850542 . G . PASS END=1850542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1850543 . T . PASS END=1850559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 1850560 . T . PASS END=1850560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 1850561 . G . PASS END=1850573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 1850574 . A . PASS END=1850574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 1850575 . C . PASS END=1850580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 1850588 . G . PASS END=1850600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,34,255:12,0 chr1 1850601 . G . PASS END=1850601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:10,0 chr1 1850602 . A . PASS END=1850615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:11,0 chr1 1850616 . C . PASS END=1850620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr1 1850621 . C . PASS END=1850624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:10,0 chr1 1850625 . G . PASS END=1850626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:18:0,27,405:0,54,255:9,0 chr1 1850627 . CAGCGGCAGG C, 50.00 PASS DP=19;MQ=248.06;MQRankSum=3.416;ReadPosRankSum=1.299;FractionInformativeReads=0.895;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:6,5,0:2,4,0:48:79,0,50,281,625,906:255,0,255:6,12:5.0000e+01,6.6010e-05,5.2862e+01,2.8678e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:1,7,4,5:3,5,2,7 chr1 1850628 . A . LowGQ END=1850637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:11,12:23:0:19:0,0,0:245,0,255:16,12 chr1 1850638 . G . PASS END=1850645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:16,0 chr1 1850646 . A . PASS END=1850646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:14,0 chr1 1850647 . G . PASS END=1850653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 1850654 . G . PASS END=1850654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 1850655 . A . PASS END=1850669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 1850670 . C . PASS END=1850670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 1850671 . G . PASS END=1850683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 1850684 . G . PASS END=1850685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1850686 . C . PASS END=1850686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 1850687 . C . PASS END=1850687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1850688 . A . PASS END=1850689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,1 chr1 1850690 . C . PASS END=1850690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 1850691 . G . PASS END=1850691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 1850692 . G . PASS END=1850694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 1850695 . C . PASS END=1850702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:13,0 chr1 1850703 . A . PASS END=1850704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:27:16:0,27,405:0,32,255:9,0 chr1 1853726 . T . PASS END=1853730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 1853731 . G . PASS END=1853735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1853736 . G . PASS END=1853736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1853737 . T . PASS END=1853737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 1853738 . C . PASS END=1853738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1853739 . A . PASS END=1853739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 1853740 . A . PASS END=1853740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:25,0 chr1 1853741 . C . PASS END=1853825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1072:0,87,255:34,0 chr1 1853826 . G . PASS END=1853827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1854028 . A . PASS END=1854045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,693:0,63,255:24,0 chr1 1854046 . C . PASS END=1854046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:22,0 chr1 1854047 . A . PASS END=1854047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1854048 . C . PASS END=1854048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 1854049 . C . PASS END=1854065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,876:0,62,255:26,0 chr1 1854066 . T . PASS END=1854066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,779:0,39,255:25,0 chr1 1854067 . C . PASS END=1854071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:26,0 chr1 1854072 . T . PASS END=1854072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,870:0,42,255:25,0 chr1 1854073 . C . PASS END=1854081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr1 1854082 . C . PASS END=1854082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:21,0 chr1 1854083 . T . PASS END=1854101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:23,0 chr1 1854102 . G . PASS END=1854102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 1854103 . C . PASS END=1854108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 1854109 . A G, 115.76 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,7,0:0,16,0:66:154,69,0,863,69,863:255,69,0:0,0:1.1576e+02,6.5765e+01,1.0354e-06,4.5000e+02,1.0053e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,15:0,0,14,9 chr1 1854110 . G . PASS END=1854119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:24,0 chr1 1854120 . T . PASS END=1854120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr1 1854121 . G . PASS END=1854128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 1854129 . G . PASS END=1854129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 1854130 . G . PASS END=1854137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 1854138 . C . PASS END=1854140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 1854141 . T . PASS END=1854141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,717:0,30,255:19,0 chr1 1854142 . G . PASS END=1854142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1854143 . T . PASS END=1854146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 1854147 . T . PASS END=1854155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1854156 . C . PASS END=1854156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr1 1854157 . A . PASS END=1854157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1854158 . A . PASS END=1854162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 1854424 . C . PASS END=1854428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr1 1854429 . T . PASS END=1854430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,927:0,70,255:29,0 chr1 1854431 . G . PASS END=1854438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1004:0,90,255:31,0 chr1 1854439 . C . PASS END=1854439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 1854440 . T . PASS END=1854444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr1 1854445 . G . PASS END=1854445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr1 1854446 . G . PASS END=1854492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1169:0,93,255:36,0 chr1 1854493 . C . PASS END=1854493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:34,0 chr1 1854494 . G . PASS END=1854499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,105,1575:0,114,255:37,0 chr1 1854500 . G . PASS END=1854500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1355:0,71,255:35,0 chr1 1854501 . T . PASS END=1854508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1366:0,100,255:38,0 chr1 1854509 . T . PASS END=1854533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1135:0,82,255:37,0 chr1 1854534 . T . PASS END=1854545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:28:0,75,1125:0,83,255:26,0 chr1 1854546 . C T, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.291;ReadPosRankSum=3.812;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,18,0:0.643,0.000:28:3,6,0:7,12,0:46:85,0,46,540,357,897:255,0,255:10,0:5.0000e+01,1.0380e-04,4.8573e+01,4.5000e+02,3.9167e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,6,12:6,4,10,8 chr1 1854547 . C . PASS END=1854550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1854551 . G . PASS END=1854561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:25,0 chr1 1854562 . G . PASS END=1854562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 1854563 . A . PASS END=1854563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr1 1854564 . G . PASS END=1854574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,872:0,64,255:24,0 chr1 1854575 . C . PASS END=1854576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,853:0,56,255:20,0 chr1 1854577 . G . PASS END=1854580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1854581 . C . PASS END=1854583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1854584 . G . PASS END=1854584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1854806 . C . PASS END=1854821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,543:0,45,255:19,0 chr1 1854822 . G . PASS END=1854838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 1854839 . C . PASS END=1854839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 1854840 . T . PASS END=1854843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1854844 . A . PASS END=1854845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 1854846 . A . PASS END=1854861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 1854862 . T . PASS END=1854888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,621:0,40,255:19,0 chr1 1854889 . A . PASS END=1854890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 1854891 . C . PASS END=1854897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 1854898 . T . PASS END=1854898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 1854899 . G . PASS END=1854901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1854902 . A . PASS END=1854902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1854903 . G . PASS END=1854906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr1 1854907 . G . PASS END=1854907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 1854908 . C . PASS END=1854909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1854910 . C . PASS END=1854910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 1854911 . C . PASS END=1854917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1854918 . C . PASS END=1854918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 1854919 . A . PASS END=1854928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 1854929 . G . PASS END=1854931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1854932 . A . PASS END=1854932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 1854933 . G . PASS END=1854933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1854934 . A . PASS END=1854938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1855214 . C . PASS END=1855217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr1 1855218 . T . PASS END=1855218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 1855219 . C . PASS END=1855228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:31,0 chr1 1855229 . C . PASS END=1855229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:30,0 chr1 1855230 . A . PASS END=1855249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1197:0,89,255:35,0 chr1 1855250 . G . PASS END=1855250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:35,0 chr1 1855251 . T . PASS END=1855281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1288:0,87,255:40,0 chr1 1855282 . C . PASS END=1855304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1156:0,93,255:34,0 chr1 1855305 . G . PASS END=1855305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 1855306 . G . PASS END=1855309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1855310 . C . PASS END=1855313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1124:0,77,255:26,0 chr1 1855314 . A . PASS END=1855318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1855319 . C T, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.427;ReadPosRankSum=1.955;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,18,0:0.621,0.000:29:8,11,0:3,7,0:47:85,0,46,620,393,1013:255,0,255:11,0:5.0000e+01,9.4485e-05,4.9299e+01,4.5000e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,9,6,12:3,8,7,11 chr1 1855320 . T . PASS END=1855320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,966:0,54,255:26,0 chr1 1855321 . T . PASS END=1855324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1855325 . G . PASS END=1855337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:25,0 chr1 1855338 . A . PASS END=1855356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,765:0,45,255:19,0 chr1 1855357 . G . PASS END=1855363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 1855364 . C . PASS END=1855368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:13,0 chr1 1855830 . C . PASS END=1855830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 1855831 . G . PASS END=1855831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1855832 . A . PASS END=1855832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr1 1855833 . C . PASS END=1855833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 1855834 . C . PASS END=1855835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 1855836 . C . PASS END=1855836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 1855837 . C . PASS END=1855837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 1855838 . T . PASS END=1855839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 1855840 . C . PASS END=1855841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 1855842 . T . PASS END=1855842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 1855843 . C . PASS END=1855843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 1855844 . C . PASS END=1855845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:22,0 chr1 1855846 . C . PASS END=1855847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr1 1855848 . G . PASS END=1855850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1855851 . A . PASS END=1855851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 1855852 . G . PASS END=1855854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1855855 . C . PASS END=1855855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 1855856 . G . PASS END=1855856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 1855857 . A . PASS END=1855857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr1 1855858 . G . PASS END=1855858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 1855859 . C . PASS END=1855860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 1855861 . G . PASS END=1855861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 1855862 . A . PASS END=1855862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 1855863 . G . PASS END=1855864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 1855865 . A . PASS END=1855865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr1 1855866 . A . PASS END=1855869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 1855870 . C . PASS END=1855870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 1855871 . G . PASS END=1855872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1855873 . C . PASS END=1855874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:42:27:0,42,917:0,42,255:26,0 chr1 1855875 . G . PASS END=1855875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1855876 . C . PASS END=1855877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 1855878 . G . PASS END=1855878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1855879 . C . PASS END=1855879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:28,0 chr1 1855880 . T . PASS END=1855880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 1855881 . G . PASS END=1855881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1855882 . C . PASS END=1855883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 1855884 . G . PASS END=1855885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1855886 . C . PASS END=1855889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr1 1855890 . G . PASS END=1855891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1855892 . C . PASS END=1855895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 1855896 . G . PASS END=1855898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 1855899 . T . PASS END=1855899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 1855900 . G . PASS END=1855900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 1855901 . C . PASS END=1855902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,1025:0,51,255:26,0 chr1 1855903 . G . PASS END=1855906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 1855907 . A . PASS END=1855907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:14:28:0,14,833:0,14,255:26,0 chr1 1855908 . G . PASS END=1855909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1855910 . C . PASS END=1855911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:26,0 chr1 1855912 . G . PASS END=1855912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1855913 . T . PASS END=1855916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:26,0 chr1 1855917 . G . PASS END=1855917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 1855918 . G . PASS END=1855929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 1855930 . C . PASS END=1855956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,64,255:26,0 chr1 1855957 . C . PASS END=1855959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 1857222 . C . PASS END=1857234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 1857235 . G . PASS END=1857236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1857237 . C . PASS END=1857237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 1857238 . A . PASS END=1857243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:23,0 chr1 1857244 . T . PASS END=1857244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 1857245 . C . PASS END=1857264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,845:0,69,255:23,0 chr1 1857265 . A . PASS END=1857266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,782:0,53,255:22,0 chr1 1857267 . G . PASS END=1857270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 1857271 . A . PASS END=1857271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1857272 . G . PASS END=1857295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,768:0,63,255:23,0 chr1 1857296 . T . PASS END=1857296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 1857297 . G . PASS END=1857306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,709:0,63,255:22,0 chr1 1857307 . G . PASS END=1857321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr1 1857322 . A . PASS END=1857327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:18:0,39,585:0,46,255:13,0 chr1 1857328 . G . PASS END=1857328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 1857329 . T . PASS END=1857354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 1857355 . A . PASS END=1857355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:10,0 chr1 1857356 . T . PASS END=1857377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,382:0,36,255:12,0 chr1 1857667 . C . PASS END=1857667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 1857668 . A . PASS END=1857668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 1857669 . G . PASS END=1857670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 1857671 . A . PASS END=1857671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 1857672 . T . PASS END=1857673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 1857674 . C . PASS END=1857675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr1 1857676 . C . PASS END=1857678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr1 1857679 . G . PASS END=1857679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 1857680 . T . PASS END=1857786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,917:0,81,255:40,0 chr1 1857896 . G . PASS END=1857901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 1857902 . A . PASS END=1857902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 1857903 . T . PASS END=1857912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1857913 . A . PASS END=1857913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr1 1857914 . G . PASS END=1857914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1857915 . A . PASS END=1857917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,83,255:26,0 chr1 1857918 . T . PASS END=1857918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1857919 . T . PASS END=1857919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:27,0 chr1 1857920 . C . PASS END=1857923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1078:0,77,255:26,0 chr1 1857924 . A . PASS END=1857924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1857925 . T . PASS END=1857925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 1857926 . G . PASS END=1857926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1857927 . G . PASS END=1857933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:64:27:0,64,870:0,64,255:26,0 chr1 1857934 . T . PASS END=1857935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1857936 . T . PASS END=1857937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 1857938 . G . PASS END=1857938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr1 1857939 . A . PASS END=1857939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1857940 . T . PASS END=1857944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 1857945 . C . PASS END=1857945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr1 1857946 . G . PASS END=1857951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 1858091 . C . PASS END=1858108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:30,0 chr1 1858109 . A . PASS END=1858123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:36,0 chr1 1858124 . T . PASS END=1858160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,95,255:37,0 chr1 1858161 . C T,G, 43.10 PASS DP=32;MQ=250.00;FractionInformativeReads=0.969 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,11,0,0:0.355,0.000,0.000:31:11,6,0,0:9,5,0,0:43:78,0,50,374,700,424,377,735,1078,1112:255,0,255:18,0:4.3095e+01,2.3479e-04,5.3000e+01,3.7433e+02,4.5000e+02,4.2733e+02,3.7735e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:12,8,6,5:9,11,3,8 chr1 1858162 . G . PASS END=1858196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1202:0,83,255:34,0 chr1 1858197 . G . PASS END=1858198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr1 1858199 . G . PASS END=1858200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:29:0,71,1061:0,71,255:26,0 chr1 1858333 . C . PASS END=1858346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1209:0,99,255:35,0 chr1 1858347 . T . PASS END=1858448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:32:0,81,1215:0,82,255:40,0 chr1 1858449 . G . PASS END=1858467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:24:0,62,937:0,62,255:25,0 chr1 1859046 . C . PASS END=1859053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 1859054 . C . PASS END=1859054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr1 1859055 . A . PASS END=1859070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1197:0,83,255:34,0 chr1 1859071 . T . PASS END=1859071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:32,0 chr1 1859072 . C . PASS END=1859138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:35:0,82,1251:0,82,255:40,0 chr1 1859139 . G . PASS END=1859172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,86,255:40,0 chr1 1859173 . T . PASS END=1859173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:27,0 chr1 1859174 . A . PASS END=1859174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1859175 . T . PASS END=1859175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 1859176 . T C, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.480;ReadPosRankSum=2.826;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:6,7,0:8,7,0:48:85,0,50,493,452,945:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,12,5,9:6,8,10,4 chr1 1859177 . C . PASS END=1859185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:25,0 chr1 1860223 . A . PASS END=1860254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr1 1860255 . G . PASS END=1860255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 1860256 . G . PASS END=1860287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,776:0,66,255:22,0 chr1 1860288 . G . PASS END=1860288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:19,0 chr1 1860289 . C . PASS END=1860294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 1860295 . C . PASS END=1860295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 1860296 . C . PASS END=1860301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 1860302 . G . PASS END=1860321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,668:0,54,255:19,0 chr1 1861499 . C . PASS END=1861544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 1861545 . G . PASS END=1861564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:18,0 chr1 1861565 . C . PASS END=1861569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1861570 . A . PASS END=1861581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 1861582 . C T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=1.429;FractionInformativeReads=0.950;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:3,7,0:6,3,0:48:85,0,50,329,318,647:255,0,255:8,0:5.0000e+01,6.5492e-05,5.2931e+01,3.2888e+02,3.5267e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,5,5:6,3,6,4 chr1 1861583 . C . PASS END=1861588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 1861589 . A . PASS END=1861589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1861590 . G . PASS END=1861619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 1861620 . G . PASS END=1861624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:16,0 chr1 1861625 . G . PASS END=1861625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 1861626 . G . PASS END=1861674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,590:0,40,255:19,0 chr1 1861675 . C . PASS END=1861682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:21,0 chr1 1861683 . T . PASS END=1861684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1861685 . G . PASS END=1861722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 1861723 . A . PASS END=1861723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 1861724 . C . PASS END=1861726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1861727 . C . PASS END=1861775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 1870294 . C . PASS END=1870412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:34:0,90,1350:0,94,255:40,0 chr1 1870413 . T . PASS END=1870413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1086:0,69,255:30,0 chr1 1870414 . T . PASS END=1870423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 1870424 . C . PASS END=1870424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 1870425 . A . PASS END=1870427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 1871033 . C . PASS END=1871035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 1871036 . G . PASS END=1871036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 1871037 . G . PASS END=1871156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1019:0,82,255:40,0 chr1 1871157 . A . PASS END=1871157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:33,0 chr1 1871158 . G . PASS END=1871206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:31:0,81,1203:0,88,255:38,0 chr1 1871755 . C . PASS END=1871766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,884:0,62,255:26,0 chr1 1871767 . C . PASS END=1871768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 1871769 . A . PASS END=1871769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 1871770 . T . PASS END=1871786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:30,0 chr1 1871787 . C . PASS END=1871787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 1871788 . C . PASS END=1871798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1111:0,90,255:32,0 chr1 1871799 . T . PASS END=1871799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr1 1871800 . C . PASS END=1871810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1180:0,93,255:32,0 chr1 1871811 . A . PASS END=1871811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 1871812 . A . PASS END=1871836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1180:0,87,255:32,0 chr1 1871837 . G . PASS END=1871842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 1873467 . C . PASS END=1873474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 1873475 . G . PASS END=1873480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:8,0 chr1 1873481 . G . PASS END=1873497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 1873498 . A . PASS END=1873505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 1873506 . G . PASS END=1873509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1873510 . G . PASS END=1873511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1873512 . A . PASS END=1873513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1873514 . A G, 92.15 PASS DP=15;MQ=249.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,8,0:0,7,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,8:0,0,6,9 chr1 1873515 . T . PASS END=1873517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 1873518 . C . PASS END=1873524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1873525 . T C, 89.13 PASS DP=14;MQ=249.65;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,8,0:0,6,0:39:127,42,0,535,42,535:255,42,0:0,0:8.9134e+01,3.9134e+01,5.3044e-04,4.5000e+02,7.3904e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,9:0,0,9,5 chr1 1873526 . G . PASS END=1873527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 1873528 . G . PASS END=1873544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 1873545 . G . PASS END=1873564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 1873565 . C . PASS END=1873574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,431:0,42,255:14,0 chr1 1873575 . A . PASS END=1873595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 1875770 . C . PASS END=1875815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:37:0,94,1282:0,94,255:40,0 chr1 1875816 . A . PASS END=1875857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1412:0,101,255:40,0 chr1 1875858 . C G, 50.00 PASS DP=38;MQ=247.11;MQRankSum=4.146;ReadPosRankSum=3.941;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,19,0:0.500,0.000:38:11,9,0:8,10,0:47:85,0,47,185,185,185:255,0,255:15,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,9,8,11:12,7,8,11:1875858 chr1 1875859 . A G, 50.00 PASS DP=38;MQ=247.11;MQRankSum=4.146;ReadPosRankSum=3.941;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,19,0:0.500,0.000:38:11,9,0:8,10,0:47:85,0,47,185,185,185:255,0,255:15,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,9,8,11:12,7,8,11:1875858 chr1 1875860 . T . PASS END=1875873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1350:0,101,255:35,0 chr1 1875874 . C . PASS END=1875874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:29,0 chr1 1875875 . A . PASS END=1875880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:29,0 chr1 1875881 . C . PASS END=1875891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,77,255:26,0 chr1 1877756 . C . PASS END=1877772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,786:0,63,255:22,0 chr1 1877773 . T . PASS END=1877773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 1877774 . C . PASS END=1877781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,771:0,69,255:23,0 chr1 1877782 . T . PASS END=1877782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:20,0 chr1 1877783 . G . PASS END=1877783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1877784 . A . PASS END=1877784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 1877785 . C . PASS END=1877819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:23,0 chr1 1877820 . G . PASS END=1877820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1877821 . G . PASS END=1877825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1877826 . A . PASS END=1877855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 1877856 . G . PASS END=1877856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 1877857 . G . PASS END=1877860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1877861 . A . PASS END=1877878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 1878429 . C . PASS END=1878430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 1878431 . C . PASS END=1878436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 1878437 . G . PASS END=1878437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1878438 . C . PASS END=1878448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1878449 . T . PASS END=1878449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 1878450 . C . PASS END=1878451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 1878452 . G . PASS END=1878452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 1878453 . C . PASS END=1878461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1056:0,84,255:29,0 chr1 1878462 . G . PASS END=1878463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 1878464 . G . PASS END=1878465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1878466 . G . PASS END=1878481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,856:0,61,255:26,0 chr1 1878482 . A . PASS END=1878482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1878483 . T . PASS END=1878483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 1878484 . C . PASS END=1878485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr1 1878486 . C . PASS END=1878487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 1878488 . C . PASS END=1878493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 1887130 . C . PASS END=1887151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 1887152 . C . PASS END=1887164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 1887165 . T . PASS END=1887165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 1887166 . T . PASS END=1887167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr1 1887168 . T . PASS END=1887168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1887169 . C . PASS END=1887176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 1887177 . T . PASS END=1887177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 1887178 . T . PASS END=1887203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1127:0,87,255:31,0 chr1 1887204 . G . PASS END=1887247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,886:0,62,255:25,0 chr1 1887248 . T . PASS END=1887250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1887251 . G . PASS END=1887253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1887254 . A . PASS END=1887255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1887256 . A . PASS END=1887257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1887258 . A . PASS END=1887266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1887267 . T . PASS END=1887268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1887269 . T . PASS END=1887281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 1887282 . A . PASS END=1887284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1887285 . C . PASS END=1887287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 1887288 . C . PASS END=1887289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 1888059 . T . PASS END=1888061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 1888062 . T . PASS END=1888064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 1888065 . C . PASS END=1888065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 1888066 . A . PASS END=1888069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 1888070 . C . PASS END=1888070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 1888071 . A . PASS END=1888088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,908:0,61,255:26,0 chr1 1888089 . C . PASS END=1888098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:28,0 chr1 1888099 . T . PASS END=1888099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 1888100 . C . PASS END=1888104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 1888105 . G . PASS END=1888105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 1888106 . C . PASS END=1888114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 1888115 . A . PASS END=1888115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 1888116 . C . PASS END=1888116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 1888117 . T . PASS END=1888117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:27,0 chr1 1888118 . T . PASS END=1888149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1172:0,83,255:32,0 chr1 1888150 . A . PASS END=1888150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 1888151 . G . PASS END=1888156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 1888157 . T . PASS END=1888172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,77,255:25,0 chr1 1888173 . C . PASS END=1888223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,593:0,45,255:19,0 chr1 1890559 . C . PASS END=1890648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:69:0,120,1800:0,164,255:40,0 chr1 1891403 . C . PASS END=1891413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 1891414 . A . PASS END=1891415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 1891416 . G . PASS END=1891422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 1891423 . G . PASS END=1891423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr1 1891424 . C . PASS END=1891427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 1891428 . T . PASS END=1891428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 1891429 . C . PASS END=1891449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,917:0,69,255:25,0 chr1 1891450 . G . PASS END=1891450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 1891451 . G . PASS END=1891465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 1891466 . A . PASS END=1891466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 1891467 . A . PASS END=1891469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 1895188 . T . PASS END=1895306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:44:0,96,1543:0,96,255:40,0 chr1 1896327 . C . PASS END=1896341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 1896342 . C . PASS END=1896342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 1896343 . T . PASS END=1896349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 1896350 . T . PASS END=1896350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 1896351 . G . PASS END=1896371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 1896372 . G . PASS END=1896372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 1896373 . A . PASS END=1896434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 1896435 . C . PASS END=1896438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1896439 . A . PASS END=1896441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 1896442 . A . PASS END=1896442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 1896443 . T . PASS END=1896448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr1 1896449 . T . PASS END=1896449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 1896450 . G . PASS END=1896460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 1896461 . T . PASS END=1896461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 1896462 . C . PASS END=1896462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 1896463 . C . PASS END=1896500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 1897810 . C . PASS END=1897818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,68,255:25,0 chr1 1897819 . C . PASS END=1897846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1111:0,93,255:31,0 chr1 1897847 . A . PASS END=1897847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1017:0,54,255:30,0 chr1 1897848 . T . PASS END=1897849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 1897850 . T . PASS END=1897850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 1897851 . C . PASS END=1897854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1186:0,93,255:31,0 chr1 1897855 . C . PASS END=1897855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 1897856 . T . PASS END=1897864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1133:0,93,255:31,0 chr1 1897865 . G . PASS END=1897865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 1897866 . T . PASS END=1897874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 1897875 . C . PASS END=1897877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 1897878 . A . PASS END=1897878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1897879 . G . PASS END=1897885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,1030:0,63,255:26,0 chr1 1897886 . C . PASS END=1897886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 1897887 . C . PASS END=1897893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,947:0,64,255:25,0 chr1 1897894 . C . PASS END=1897894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:25,0 chr1 1897895 . C . PASS END=1897922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,906:0,62,255:26,0 chr1 1897923 . C . PASS END=1897923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 1897924 . C . PASS END=1897959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 1897960 . G A, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.266;ReadPosRankSum=1.457;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,11,0:0.647,0.000:17:1,5,0:5,6,0:47:85,0,47,336,215,550:255,0,182:5,0:5.0000e+01,8.5166e-05,5.0164e+01,3.3585e+02,2.4936e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,3,8:4,2,3,8 chr1 1897961 . T . PASS END=1897965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 1900074 . C . PASS END=1900272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:31:0,87,1305:0,93,255:40,0 chr1 1902098 . C . PASS END=1902122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:19,0 chr1 1902123 . G . PASS END=1902123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:18,0 chr1 1902124 . C . PASS END=1902126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 1902127 . G . PASS END=1902128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1902129 . G . PASS END=1902129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 1902130 . C . PASS END=1902131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1902132 . G . PASS END=1902134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,765:0,30,255:22,0 chr1 1902135 . G . PASS END=1902142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 1902143 . T . PASS END=1902143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 1902144 . G . PASS END=1902148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 1902149 . A . PASS END=1902149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 1902150 . A . PASS END=1902180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,923:0,62,255:26,0 chr1 1902181 . C . PASS END=1902181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:23,0 chr1 1902182 . T . PASS END=1902187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:24,0 chr1 1902188 . G . PASS END=1902188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 1902189 . C . PASS END=1902193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 1902194 . A . PASS END=1902198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 1902199 . C . PASS END=1902201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1902202 . C . PASS END=1902202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 1902203 . T . PASS END=1902218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 1902219 . T . PASS END=1902239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 1902240 . A . PASS END=1902240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1902241 . C . PASS END=1902246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 1902247 . C . PASS END=1902255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 1903419 . C . PASS END=1903464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,507:0,45,255:16,0 chr1 1903465 . C . PASS END=1903467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 1903468 . C . PASS END=1903500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 1903501 . T . PASS END=1903521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,421:0,39,255:13,0 chr1 1904376 . C . PASS END=1904390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 1904391 . T . PASS END=1904478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1078:0,80,255:37,0 chr1 1904479 . G . PASS END=1904479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr1 1904480 . G . PASS END=1904486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 1905464 . C . PASS END=1905474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 1905475 . C . PASS END=1905483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:13,0 chr1 1905484 . C . PASS END=1905504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:18,0 chr1 1905505 . C . PASS END=1905538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:23,0 chr1 1905539 . A . PASS END=1905539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 1905540 . C . PASS END=1905568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:23,0 chr1 1905569 . T . PASS END=1905569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 1905570 . C . PASS END=1905571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 1905572 . T . PASS END=1905592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 1905593 . G . PASS END=1905593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 1905594 . C . PASS END=1905612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 1905613 . G . PASS END=1905613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1905614 . A . PASS END=1905618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1905619 . G . PASS END=1905626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 1905627 . A . PASS END=1905627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 1905628 . C . PASS END=1905628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1905629 . A . PASS END=1905637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,360:0,22,255:9,0 chr1 1916426 . C . PASS END=1916491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,99,1394:0,99,255:40,0 chr1 1916492 . A . PASS END=1916528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:36:0,87,1305:0,88,255:40,0 chr1 1916529 . C T, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.078;ReadPosRankSum=1.449;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,20,0:0.556,0.000:36:12,10,0:4,10,0:48:85,0,49,665,511,1176:255,0,255:11,0:5.0000e+01,7.1446e-05,5.1907e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,10,10:10,6,8,12 chr1 1916530 . T . PASS END=1916535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 1916536 . A . PASS END=1916537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr1 1916538 . C . PASS END=1916540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1916541 . A . PASS END=1916544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1094:0,77,255:25,0 chr1 1916545 . C . PASS END=1916546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 1916547 . C . PASS END=1916551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1092:0,77,255:26,0 chr1 1916825 . T . PASS END=1916825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 1916826 . C . PASS END=1916889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1272:0,81,255:40,0 chr1 1916890 . C T, 47.59 PASS DP=41;MQ=250.00;MQRankSum=5.385;ReadPosRankSum=4.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,17,0:0.415,0.000:41:11,7,0:13,10,0:46:82,0,50,608,821,1429:255,0,255:21,0:4.7587e+01,9.7332e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,5,12:11,13,9,8 chr1 1916891 . A . PASS END=1916927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,94,255:38,0 chr1 1916928 . C . PASS END=1916929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:32:0,75,1125:0,86,255:25,0 chr1 1918376 . A . PASS END=1918376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1918377 . T . PASS END=1918377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 1918378 . G . PASS END=1918387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr1 1918388 . T . PASS END=1918388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 1918389 . C . PASS END=1918396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 1918397 . G . PASS END=1918397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 1918398 . T . PASS END=1918420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 1918421 . T . PASS END=1918421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 1918422 . C . PASS END=1918430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 1918431 . T . PASS END=1918431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 1918432 . G . PASS END=1918445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr1 1918446 . G . PASS END=1918450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 1918451 . T . PASS END=1918460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:18,0 chr1 1918461 . C . PASS END=1918461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:15,0 chr1 1918462 . G . PASS END=1918462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 1918463 . C . PASS END=1918463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr1 1918464 . G . PASS END=1918466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 1918467 . G . PASS END=1918467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 1918468 . C . PASS END=1918469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 1918470 . C . PASS END=1918471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 1918472 . C . PASS END=1918474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 1919563 . T . PASS END=1919572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 1919951 . C . PASS END=1920094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:28:0,81,1025:0,83,255:40,0 chr1 1920328 . C . PASS END=1920328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:18,0 chr1 1920329 . T . PASS END=1920329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:18,0 chr1 1920330 . G . PASS END=1920330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 1920331 . C . PASS END=1920331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:23,0 chr1 1920332 . T . PASS END=1920332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,922:0,34,255:23,0 chr1 1920333 . G . PASS END=1920333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:23,0 chr1 1920334 . T . PASS END=1920334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:23,0 chr1 1920335 . G . PASS END=1920335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,922:0,34,255:24,0 chr1 1920336 . T . PASS END=1920337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,922:0,46,255:25,0 chr1 1920338 . C . PASS END=1920340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:25,0 chr1 1920341 . G . PASS END=1920341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:30,0 chr1 1920342 . G . PASS END=1920343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:30,0 chr1 1920344 . C . PASS END=1920345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:30,0 chr1 1920346 . A . PASS END=1920346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1078:0,49,255:30,0 chr1 1920347 . C . PASS END=1920348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1158:0,80,255:31,0 chr1 1920349 . T . PASS END=1920349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1133:0,25,255:31,0 chr1 1920350 . C . PASS END=1920350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 1920351 . A . PASS END=1920351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1165:0,36,255:31,0 chr1 1920352 . T . PASS END=1920352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1180:0,50,255:31,0 chr1 1920353 . C . PASS END=1920354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1332:0,92,255:32,0 chr1 1920355 . T . PASS END=1920355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:32,0 chr1 1920356 . C . PASS END=1920356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 1920357 . A . PASS END=1920357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1249:0,39,255:32,0 chr1 1920358 . G . PASS END=1920358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 1920359 . C . PASS END=1920359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 1920360 . T . PASS END=1920360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1217:0,39,255:33,0 chr1 1920361 . T . PASS END=1920361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1202:0,53,255:33,0 chr1 1920362 . C . PASS END=1920362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr1 1920363 . C . PASS END=1920363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 1920364 . T . PASS END=1920364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:32,0 chr1 1920365 . G . PASS END=1920365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1257:0,89,255:33,0 chr1 1920366 . T . PASS END=1920366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1165:0,36,255:33,0 chr1 1920367 . A . PASS END=1920368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:33,0 chr1 1920369 . A . PASS END=1920370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:34,0 chr1 1920371 . G . PASS END=1920371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:34,0 chr1 1920372 . A . PASS END=1920372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1105:0,72,255:33,0 chr1 1920373 . C . PASS END=1920374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1235:0,88,255:34,0 chr1 1920375 . T . PASS END=1920375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:34,0 chr1 1920376 . T . PASS END=1920385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1144:0,102,255:34,0 chr1 1920386 . A . PASS END=1920386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,967:0,68,255:30,0 chr1 1920387 . C . PASS END=1920387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 1920388 . T . PASS END=1920388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:31,0 chr1 1920389 . C . PASS END=1920389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 1920390 . C . PASS END=1920392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 1920393 . A . PASS END=1920398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,82,255:25,0 chr1 1920399 . T . PASS END=1920412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,62,255:19,0 chr1 1922329 . C . PASS END=1922340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,125,255:40,0 chr1 1922341 . G . PASS END=1922395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,117,1755:0,120,255:40,0 chr1 1950863 . A . PASS END=1950874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 1950875 . G . LowGQ END=1950875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 1950876 . C . PASS END=1950921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 1950922 . C . PASS END=1950930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 1950935 . G . PASS END=1950935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 1950940 . C . PASS END=1950940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 1955137 . A . PASS END=1955162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 1955163 . A . PASS END=1955163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 1955164 . A . PASS END=1955164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 1955165 . A . PASS END=1955190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 1955191 . A . PASS END=1955191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 1955192 . T . PASS END=1955226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 1955227 . T . PASS END=1955237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 1955238 . G . PASS END=1955260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,164:0,15,164:5,0 chr1 1955261 . A . LowGQ END=1955261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 1955262 . A . PASS END=1955264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,105:0,15,105:5,0 chr1 1955608 . A . PASS END=1955610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 1955611 . T . PASS END=1955611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 1955612 . G . PASS END=1955612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 1955613 . C . PASS END=1955613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,336:0,22,255:12,0 chr1 1955614 . A . LowGQ END=1955614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,255:11,0,255:10,0 chr1 1955615 . T . PASS END=1955615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,352:0,22,255:12,0 chr1 1955616 . T . PASS END=1955616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 1955617 . T . PASS END=1955617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 1955618 . T . PASS END=1955618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,349:0,6,255:11,0 chr1 1955619 . G . PASS END=1955622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 1955623 . G . LowGQ END=1955623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,337:0,0,255:11,0 chr1 1955624 . A . PASS END=1955624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 1955625 . C . PASS END=1955625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1955626 . G . PASS END=1955626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:11,0 chr1 1955627 . C . PASS END=1955629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 1955630 . T . PASS END=1955631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 1955632 . C . PASS END=1955633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1955634 . A . PASS END=1955634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,335:0,9,255:11,0 chr1 1955635 . C . PASS END=1955635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1955636 . C . PASS END=1955638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,396:0,22,255:12,0 chr1 1955639 . G . PASS END=1955641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 1955642 . C . PASS END=1955642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,360:0,22,255:11,0 chr1 1955643 . A . LowGQ END=1955643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,366:0,0,255:11,0 chr1 1955644 . G . PASS END=1955644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 1955645 . G . PASS END=1955646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,357:0,9,255:11,0 chr1 1955647 . G . PASS END=1955647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 1955648 . A . PASS END=1955650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 1955651 . A . PASS END=1955651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,421:0,15,255:12,0 chr1 1955652 . G . PASS END=1955652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1955653 . A . PASS END=1955653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:12,0 chr1 1955654 . T . PASS END=1955660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:14:0,31,504:0,31,255:13,0 chr1 1955661 . C . PASS END=1955661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,397:0,3,255:12,0 chr1 1955662 . G . PASS END=1955667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 1955668 . G . PASS END=1955668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 1955669 . T . PASS END=1955669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:15,0 chr1 1955670 . G . PASS END=1955671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 1955672 . T . PASS END=1955672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 1955673 . G . PASS END=1955700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 1955701 . G . PASS END=1955702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr1 1955703 . G . PASS END=1955706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 1955707 . G . PASS END=1955745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,723:0,63,255:24,0 chr1 1955746 . G . PASS END=1955754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:29,0 chr1 1955755 . T . PASS END=1955755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 1955756 . C . PASS END=1955774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1116:0,87,255:35,0 chr1 1955775 . G . PASS END=1955775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 1955776 . G . PASS END=1955846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1159:0,85,255:35,0 chr1 1955847 . A . PASS END=1955847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,935:0,76,255:28,0 chr1 1955848 . C . PASS END=1955850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1955851 . A . PASS END=1955851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 1955852 . G . PASS END=1955852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 1955853 . A . PASS END=1955853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,936:0,76,255:28,0 chr1 1955854 . G . PASS END=1955883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1090:0,90,255:31,0 chr1 1955884 . C . PASS END=1955946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr1 1955947 . A . PASS END=1955978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,908:0,62,255:24,0 chr1 1955979 . G . PASS END=1955980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 1955981 . A . PASS END=1955983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1955984 . C T, 43.06 PASS DP=23;MQ=250.00;MQRankSum=3.666;ReadPosRankSum=2.679;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,7,0:0.318,0.000:22:8,3,0:7,4,0:43:78,0,50,220,535,755:197,0,255:14,0:4.3063e+01,2.3635e-04,5.3000e+01,2.2035e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,11,5,2:9,6,3,4 chr1 1955985 . C . PASS END=1955993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 1955994 . G . PASS END=1955999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1956000 . C . PASS END=1956001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1956002 . C . PASS END=1956004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1956005 . G . PASS END=1956005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1956006 . G . PASS END=1956006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1956007 . G . PASS END=1956008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1956009 . T . PASS END=1956014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 1956015 . C . PASS END=1956019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 1956020 . G . PASS END=1956021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 1956022 . C . PASS END=1956025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1956026 . C . PASS END=1956036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:22,0 chr1 1956037 . T . PASS END=1956108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,44,255:19,0 chr1 1956109 . T . PASS END=1956109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 1956110 . C . PASS END=1956111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr1 1956112 . C . PASS END=1956132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 1956133 . T . PASS END=1956133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 1956134 . G . PASS END=1956147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:25,0 chr1 1956148 . G . PASS END=1956148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 1956149 . A . PASS END=1956226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,770:0,63,255:26,0 chr1 1956227 . A . PASS END=1956253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 1956254 . T . PASS END=1956258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 1956259 . C . PASS END=1956264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:15,0 chr1 1956265 . C . PASS END=1956265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr1 1956266 . C . PASS END=1956285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 1956286 . T . PASS END=1956286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 1956287 . G . PASS END=1956288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1956289 . C . PASS END=1956297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,759:0,50,255:19,0 chr1 1956298 . T . PASS END=1956298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,676:0,33,255:17,0 chr1 1956299 . G . PASS END=1956310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr1 1956311 . G . PASS END=1956311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 1956312 . G . PASS END=1956322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,712:0,44,255:18,0 chr1 1956323 . G . PASS END=1956324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1956325 . C . PASS END=1956361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:21:0,61,762:0,61,255:26,0 chr1 1956362 . G A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=1.972;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,15,0:0.577,0.000:26:5,6,0:6,9,0:48:85,0,49,536,393,930:255,0,255:10,0:5.0000e+01,7.2999e-05,5.1659e+01,4.5000e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,9,6:8,3,6,9 chr1 1956363 . G . PASS END=1956372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 1956373 . A . PASS END=1956373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 1956374 . T . PASS END=1956375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 1956376 . C . PASS END=1956376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1956377 . C . PASS END=1956393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 1956394 . A . PASS END=1956394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 1956395 . T . PASS END=1956399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 1956400 . G . PASS END=1956406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 1956407 . T . PASS END=1956442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,878:0,61,255:25,0 chr1 1956443 . T . PASS END=1956443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 1956444 . G . PASS END=1956455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 1956456 . A . PASS END=1956466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 1956467 . C . PASS END=1956471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1956472 . A . PASS END=1956493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:18:0,42,630:0,44,255:19,0 chr1 1956773 . G . PASS END=1956775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 1956776 . C . PASS END=1956780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1092:0,84,255:29,0 chr1 1956781 . G . PASS END=1956781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 1956782 . T . PASS END=1956783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 1956784 . A . PASS END=1956784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 1956785 . A . PASS END=1956785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 1956786 . T . PASS END=1956786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 1956787 . G . PASS END=1956802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1133:0,86,255:32,0 chr1 1956803 . A . PASS END=1956803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:30,0 chr1 1956804 . G . PASS END=1956823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:32,0 chr1 1956824 . T . PASS END=1956824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1020:0,63,255:28,0 chr1 1956825 . C . PASS END=1956826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 1956827 . C . PASS END=1956827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 1956828 . A . PASS END=1956834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:30,0 chr1 1956835 . A . PASS END=1956835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 1956836 . A . PASS END=1956838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 1956839 . T . PASS END=1956839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 1956840 . G . PASS END=1956841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1956842 . T . PASS END=1956871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:26,0 chr1 1956957 . G . PASS END=1956963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1956964 . C . PASS END=1956995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 1956996 . G . PASS END=1956996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 1956997 . A . PASS END=1956998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 1956999 . A . PASS END=1956999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1957000 . G . PASS END=1957002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,743:0,47,255:19,0 chr1 1957003 . G . PASS END=1957026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 1957027 . A . PASS END=1957027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:20,0 chr1 1957028 . G . PASS END=1957036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,848:0,61,255:23,0 chr1 1957037 . T C, 47.96 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=1.026;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,10,0:0.400,0.000:25:4,5,0:11,5,0:47:83,0,50,357,508,865:255,0,255:15,0:4.7962e+01,9.1120e-05,5.3000e+01,3.5735e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,6,4:6,9,7,3 chr1 1957038 . C . PASS END=1957045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:25,0 chr1 1957046 . C . PASS END=1957046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 1957047 . C . PASS END=1957074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,901:0,75,255:25,0 chr1 1957075 . A . PASS END=1957084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 1957085 . C . PASS END=1957085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 1957086 . G . PASS END=1957088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 1957089 . A . PASS END=1957098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 1957099 . C . PASS END=1957100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 1957101 . G . PASS END=1957101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 1957102 . C . PASS END=1957124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 1957125 . G . PASS END=1957158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 1957159 . T . PASS END=1957174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr1 1957175 . C . PASS END=1957176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 1957177 . G . PASS END=1957178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 1957183 . C . PASS END=1957183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 1959008 . C . PASS END=1959008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1504:0,117,255:39,0 chr1 1959016 . A . PASS END=1959098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:41:0,85,1474:0,85,255:40,0 chr1 1959510 . G . PASS END=1959516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:22,0 chr1 1959517 . G . PASS END=1959517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 1959518 . T . PASS END=1959526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,817:0,69,255:24,0 chr1 1959527 . A . PASS END=1959528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:20,0 chr1 1959529 . C . PASS END=1959534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 1959535 . T . PASS END=1959535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:24,0 chr1 1959536 . G . PASS END=1959536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 1959537 . C . PASS END=1959537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:24,0 chr1 1959538 . C . PASS END=1959542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 1959543 . C . PASS END=1959545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 1959546 . C . PASS END=1959550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 1959551 . G . PASS END=1959557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 1959558 . C . PASS END=1959558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 1959559 . G . PASS END=1959582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:85:30:0,85,1046:0,85,255:35,0 chr1 1959583 . T . PASS END=1959583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:34,0 chr1 1959584 . T . PASS END=1959598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1225:0,89,255:34,0 chr1 1959599 . T . PASS END=1959599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:31,0 chr1 1959600 . A . PASS END=1959613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1201:0,86,255:34,0 chr1 1959614 . A . PASS END=1959614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr1 1959615 . T . PASS END=1959643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1065:0,80,255:33,0 chr1 1959644 . C . PASS END=1959645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr1 1959646 . C . PASS END=1959652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:27,0 chr1 1959653 . G . PASS END=1959653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:25,0 chr1 1959654 . G . PASS END=1959657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1959658 . G . PASS END=1959659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 1959660 . A . PASS END=1959667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 1959668 . C . PASS END=1959668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:24,0 chr1 1959669 . A . PASS END=1959671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 1959672 . T . PASS END=1959673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1959674 . G . PASS END=1959677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 1959678 . A . PASS END=1959678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,992:0,56,255:22,0 chr1 1959679 . G . PASS END=1959690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,941:0,65,255:24,0 chr1 1959691 . C . PASS END=1959691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,831:0,23,255:21,0 chr1 1959692 . A . PASS END=1959693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 1959694 . C . PASS END=1959694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:19,0 chr1 1959695 . T . PASS END=1959695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 1959696 . A . PASS END=1959696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:19,0 chr1 1959697 . C . PASS END=1959701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 1959702 . T . PASS END=1959705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 1959706 . C . PASS END=1959706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1959707 . A . PASS END=1959724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,720:0,44,255:19,0 chr1 1959725 . A . PASS END=1959725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 1959726 . A . PASS END=1959731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 1960550 . C . PASS END=1960558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 1960559 . T . PASS END=1960559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 1960560 . C . PASS END=1960569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 1960570 . A . PASS END=1960602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:24,0 chr1 1960603 . G . PASS END=1960607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 1960608 . C . PASS END=1960608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 1960609 . A . PASS END=1960609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 1960610 . T . PASS END=1960612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1960613 . T . PASS END=1960613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 1960614 . C . PASS END=1960647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,925:0,64,255:26,0 chr1 1960648 . A . PASS END=1960681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,645:0,54,255:19,0 chr1 1960682 . C . PASS END=1960693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:22,0 chr1 1960694 . G . PASS END=1960719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 1960720 . C . PASS END=1960720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 1960721 . G . PASS END=1960744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 1960745 . C . PASS END=1960746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 1960747 . G . PASS END=1960759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:19,0 chr1 1960760 . G . PASS END=1960761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 1960762 . A . PASS END=1960764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 1960765 . C . PASS END=1960765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 1960766 . C . PASS END=1960776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 1960777 . G . PASS END=1960777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 1960778 . C . PASS END=1960778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 1960779 . T . PASS END=1960820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 1960821 . G . PASS END=1960846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 1960847 . G . PASS END=1960847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:17,0 chr1 1960981 . G . PASS END=1960981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 1960990 . G . PASS END=1961000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,870:0,72,255:24,0 chr1 1961001 . G . PASS END=1961001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 1961002 . T . PASS END=1961011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,892:0,72,255:26,0 chr1 1961012 . G . PASS END=1961118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1062:0,84,255:36,0 chr1 1961119 . T . PASS END=1961120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 1961121 . G . PASS END=1961132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1031:0,84,255:28,0 chr1 1961133 . G . PASS END=1961151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:26,0 chr1 1961152 . A . PASS END=1961204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,652:0,51,255:19,0 chr1 1961205 . A . PASS END=1961213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 1961214 . G . PASS END=1961246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:16,0 chr1 1961247 . A . PASS END=1961247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 1961248 . A . PASS END=1961264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr1 1961265 . G . PASS END=1961271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 1961272 . C . PASS END=1961293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 1961294 . C . PASS END=1961341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 1961342 . C . PASS END=1961363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,476:0,42,255:16,0 chr1 1961364 . G . PASS END=1961364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 1961365 . G . PASS END=1961369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1961370 . G . PASS END=1961405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 1961406 . A . PASS END=1961406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 1961407 . C . PASS END=1961420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:13,0 chr1 1961421 . G . PASS END=1961423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 1961424 . G . PASS END=1961424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 1961425 . G . PASS END=1961437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:14,0 chr1 1961438 . C . PASS END=1961438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,442:0,28,255:14,0 chr1 1961439 . C . PASS END=1961453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 1961454 . C . PASS END=1961484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,459:0,39,255:13,0 chr1 1961485 . G . PASS END=1961485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 1961486 . C . PASS END=1961488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 1961489 . T . PASS END=1961489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 1961490 . C . PASS END=1961496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 1961497 . C . PASS END=1961497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 1961498 . G . PASS END=1961501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 1961502 . G . LowGQ END=1961502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 1961503 . C . PASS END=1961503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 1961504 . G . PASS END=1961514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 1961515 . G . PASS END=1961525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 1961526 . G . PASS END=1961537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 1961538 . G . PASS END=1961538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 1961539 . T . PASS END=1961544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 1961545 . G . PASS END=1961553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 1961554 . A . PASS END=1961554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:10,0 chr1 1961555 . C . PASS END=1961565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 1961566 . A . PASS END=1961571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 1961572 . G . PASS END=1961575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 1961576 . G . PASS END=1961576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 1961577 . G . PASS END=1961582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 1961583 . C . PASS END=1961592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 1961593 . G . PASS END=1961593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 1961594 . G . PASS END=1961615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 1961616 . G . PASS END=1961649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,297:0,30,255:11,0 chr1 1961650 . T . PASS END=1961650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 1961651 . A . PASS END=1961651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 1961652 . C . PASS END=1961679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,217:0,21,217:8,0 chr1 1961680 . G . PASS END=1961680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 1961681 . C . PASS END=1961682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 1961683 . G . LowGQ END=1961683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:18,0,204:6,0 chr1 1961684 . C . PASS END=1961688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 1961689 . A . PASS END=1961689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 1961690 . A . PASS END=1961709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:8,0 chr1 1961710 . T . PASS END=1961721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,233:6,0 chr1 1982070 . A . PASS END=1982070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 1982071 . T . PASS END=1982071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 1982072 . G . PASS END=1982073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 1982074 . C . PASS END=1982074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 1982075 . C . PASS END=1982075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 1982076 . A . PASS END=1982076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 1982077 . G . PASS END=1982081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 1982082 . A . PASS END=1982082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 1982083 . C . PASS END=1982087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 1982088 . C . PASS END=1982088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 1982089 . C . PASS END=1982089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 1982090 . C . PASS END=1982090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 1982091 . A . PASS END=1982091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 1982092 . A . PASS END=1982092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 1982093 . G . PASS END=1982093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 1982094 . A . PASS END=1982094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 1982095 . T . PASS END=1982095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 1982096 . G . PASS END=1982096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 1982097 . G . PASS END=1982097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 1982098 . A . PASS END=1982098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 1982099 . A . PASS END=1982099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr1 1982100 . G . PASS END=1982102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 1982103 . A . PASS END=1982103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 1982104 . G . PASS END=1982104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 1982105 . C . PASS END=1982105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 1982106 . G . PASS END=1982106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1982107 . G . PASS END=1982107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 1982108 . C . PASS END=1982111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1982112 . C . PASS END=1982112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 1982113 . G . PASS END=1982114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1982115 . G . PASS END=1982118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr1 1982119 . G . PASS END=1982120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:16,0 chr1 1982121 . C . PASS END=1982121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 1982122 . T . PASS END=1982122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,450:0,18,255:15,0 chr1 1982123 . C . PASS END=1982123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 1982124 . A . PASS END=1982124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,494:0,18,255:15,0 chr1 1982125 . A . PASS END=1982125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,491:0,20,255:15,0 chr1 1982126 . G . PASS END=1982126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:15,0 chr1 1982127 . G . PASS END=1982127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1982128 . C . PASS END=1982129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,533:0,34,255:15,0 chr1 1982130 . C . PASS END=1982130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 1982131 . A . PASS END=1982131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,483:0,34,255:14,0 chr1 1982132 . T . PASS END=1982132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,424:0,12,255:14,0 chr1 1982133 . T . PASS END=1982133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 1982134 . A . PASS END=1982134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 1982135 . C . PASS END=1982135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:13,0 chr1 1982136 . G . PASS END=1982138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,520:0,31,255:15,0 chr1 1982139 . G . PASS END=1982140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 1986880 . G . PASS END=1986882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 1986883 . C . PASS END=1986944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:26,0 chr1 1986945 . A . PASS END=1986945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:21,0 chr1 1986946 . C . PASS END=1986988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,878:0,62,255:26,0 chr1 1986989 . G . PASS END=1987001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 1987923 . G . PASS END=1987928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 1987929 . C . PASS END=1987930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 1987931 . T . PASS END=1987931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 1987932 . G . PASS END=1987933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 1987934 . A . PASS END=1987934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:27,0 chr1 1987935 . C . PASS END=1987937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 1987938 . T . PASS END=1987938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 1987939 . G . PASS END=1987954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr1 1987955 . C . PASS END=1987955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 1987956 . T . PASS END=1987992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1147:0,83,255:33,0 chr1 1987993 . T C, 49.94 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=3.554;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:7,9,0:9,5,0:47:85,0,47,185,185,185:255,0,255:15,0:4.9936e+01,8.7495e-05,5.0000e+01,1.8471e+02,2.1948e+02,1.8772e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,12,5,9:7,9,6,8 chr1 1987994 . G . PASS END=1987998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 1987999 . C . PASS END=1987999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:28,0 chr1 1988000 . C . PASS END=1988001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 1988002 . C . PASS END=1988002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 1988003 . A . PASS END=1988004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 1988005 . C . PASS END=1988005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1030:0,43,255:25,0 chr1 1988006 . A . PASS END=1988006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 1988007 . T . PASS END=1988011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1047:0,74,255:26,0 chr1 1988012 . G . PASS END=1988012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 1990980 . T . PASS END=1991010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1328:0,98,255:37,0 chr1 1991011 . G . PASS END=1991011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 1991012 . C . PASS END=1991027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,96,255:35,0 chr1 1991028 . A . PASS END=1991028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,998:0,46,255:26,0 chr1 1991029 . C . PASS END=1991030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:27,0 chr1 2005693 . A . PASS END=2005702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 2005703 . C . PASS END=2005708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 2005709 . C . PASS END=2005709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 2005710 . G . PASS END=2005712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 2005713 . T . PASS END=2005714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 2006119 . A . PASS END=2006120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 2006121 . G . PASS END=2006126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 2006127 . G A, 50.00 PASS DP=28;MQ=248.53;MQRankSum=4.433;ReadPosRankSum=0.905;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,16,0:0.571,0.000:28:5,8,0:7,8,0:48:85,0,49,543,429,972:255,0,255:11,0:5.0000e+01,7.1705e-05,5.1862e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,7,9:5,7,9,7 chr1 2006128 . G . PASS END=2006164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1113:0,80,255:38,0 chr1 2006165 . C . PASS END=2006206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,95,255:39,0 chr1 2013760 . A . PASS END=2013778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,468:0,45,255:16,0 chr1 2013779 . T . PASS END=2013779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 2013780 . C . PASS END=2013789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr1 2013790 . G . PASS END=2013795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:21,0 chr1 2013796 . T . PASS END=2013796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:19,0 chr1 2013797 . A . PASS END=2013804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 2013805 . G . PASS END=2013812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 2013813 . C . PASS END=2013819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2013820 . A . PASS END=2013820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:24,0 chr1 2013821 . A . PASS END=2013827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 2013828 . T . PASS END=2013828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2013829 . A . PASS END=2013829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,854:0,51,255:26,0 chr1 2013830 . G . PASS END=2013862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 2013863 . G . PASS END=2013865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 2013866 . A . PASS END=2013867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 2013868 . T . PASS END=2013872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,686:0,49,255:19,0 chr1 2013873 . T . PASS END=2013873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,562:0,29,255:17,0 chr1 2013874 . T . PASS END=2013899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,631:0,41,255:19,0 chr1 2066701 . A . PASS END=2066705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 2066706 . A . PASS END=2066706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,866:0,59,255:24,0 chr1 2066707 . T . PASS END=2066719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,901:0,75,255:26,0 chr1 2066720 . A . PASS END=2066722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 2066723 . C . PASS END=2066730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr1 2066731 . G . PASS END=2066733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2066734 . G . PASS END=2066751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,74,255:26,0 chr1 2066752 . A . PASS END=2066752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,782:0,42,255:22,0 chr1 2066753 . C . PASS END=2066771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,864:0,72,255:24,0 chr1 2066772 . A . PASS END=2066772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 2066773 . A . PASS END=2066776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 2066777 . C . PASS END=2066786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,56,255:19,0 chr1 2075649 . A . LowGQ END=2075649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,587:14,0,255:18,0 chr1 2075650 . G . PASS END=2075650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 2075651 . A . PASS END=2075651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,716:0,55,255:23,0 chr1 2075652 . G . PASS END=2075653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 2075654 . G . PASS END=2075655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 2075656 . A . PASS END=2075657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 2075658 . T . PASS END=2075664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 2075665 . A . PASS END=2075665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 2075666 . G . PASS END=2075668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 2075669 . C . PASS END=2075687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:26,0 chr1 2075688 . C . PASS END=2075688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 2075689 . T . PASS END=2075694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2075695 . G . PASS END=2075695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:25,0 chr1 2075696 . G . PASS END=2075699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 2075700 . G . PASS END=2075701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2075702 . C . PASS END=2075714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:64:26:0,64,931:0,64,255:26,0 chr1 2075715 . A . PASS END=2075715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:22,0 chr1 2075716 . A . PASS END=2075722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,870:0,69,255:24,0 chr1 2075723 . A . PASS END=2075723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:23,0 chr1 2075724 . C . PASS END=2075745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:25,0 chr1 2075746 . A . PASS END=2075775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 2075776 . A . PASS END=2075780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 2077466 . G . PASS END=2077538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1101:0,82,255:34,0 chr1 2077539 . C . PASS END=2077540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 2077541 . G . PASS END=2077542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2077543 . T . PASS END=2077547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 2080311 . T . PASS END=2080363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,112,1468:0,112,255:40,0 chr1 2082229 . G . PASS END=2082246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 2082247 . G . PASS END=2082268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:23,0 chr1 2082269 . T . PASS END=2082269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 2082270 . C . PASS END=2082272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 2082273 . T . PASS END=2082273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 2082274 . C . PASS END=2082291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,739:0,63,255:22,0 chr1 2082292 . G . PASS END=2082292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2082293 . A . PASS END=2082313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 2082314 . T . PASS END=2082320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 2082321 . C . PASS END=2082327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:22,0 chr1 2082328 . T . PASS END=2082328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 2082329 . A . PASS END=2082330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 2082331 . G . PASS END=2082331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 2082332 . C . PASS END=2082337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 2082338 . T . PASS END=2082338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 2082339 . T . PASS END=2082339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,679:0,38,255:18,0 chr1 2082340 . C . PASS END=2082342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2082343 . C . PASS END=2082347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 2082348 . G . PASS END=2082348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2082349 . C . PASS END=2082349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr1 2082350 . G . PASS END=2082354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2082355 . A . PASS END=2082355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 2082356 . A . PASS END=2082361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,671:0,63,255:21,0 chr1 2082362 . A . PASS END=2082418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 2087434 . G . PASS END=2087435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1100:0,87,255:30,0 chr1 2087436 . T . PASS END=2087436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 2087437 . A . PASS END=2087440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 2087441 . A . PASS END=2087441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 2087442 . C . PASS END=2087531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:31:0,93,1133:0,93,255:40,0 chr1 2088632 . G . PASS END=2088637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,922:0,72,255:26,0 chr1 2088638 . G . PASS END=2088726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1072:0,87,255:40,0 chr1 2088727 . G . PASS END=2088727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:30,0 chr1 2088728 . C . PASS END=2088734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 2099730 . G . PASS END=2099736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 2099737 . T . PASS END=2099738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,743:0,60,255:23,0 chr1 2099739 . G . PASS END=2099739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 2099740 . A . PASS END=2099750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 2099751 . C . PASS END=2099759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:30,0 chr1 2099760 . A . PASS END=2099760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 2099761 . A . PASS END=2099763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 2099764 . G . PASS END=2099764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 2099765 . C . PASS END=2099916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1164:0,86,255:40,0 chr1 2099917 . T . PASS END=2099917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:30,0 chr1 2099918 . G . PASS END=2099929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr1 2099930 . T . PASS END=2099930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 2099931 . C . PASS END=2099969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1119:0,86,255:33,0 chr1 2099970 . A . PASS END=2099970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 2099971 . C . PASS END=2099973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1170:0,93,255:31,0 chr1 2099974 . A . PASS END=2099974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 2099975 . T . PASS END=2099977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 2099978 . T . PASS END=2099978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 2099979 . T . PASS END=2099986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:30,0 chr1 2099987 . A . PASS END=2099987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 2099988 . G . PASS END=2099988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 2099989 . T . PASS END=2100006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:26:0,61,892:0,61,255:25,0 chr1 2100388 . A . PASS END=2100388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 2100389 . T . PASS END=2100389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 2100390 . G . PASS END=2100397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1109:0,90,255:30,0 chr1 2100398 . C . PASS END=2100398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 2100399 . G . PASS END=2100494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1064:0,80,255:35,0 chr1 2100495 . T . PASS END=2100521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 2100522 . A . PASS END=2100527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 2100528 . C . PASS END=2100532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 2100533 . A . PASS END=2100533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 2100534 . G . PASS END=2100534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2100535 . G . PASS END=2100617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,50,255:19,0 chr1 2100618 . C . PASS END=2100618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:13,0 chr1 2100619 . A . PASS END=2100640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 2100641 . A . PASS END=2100660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:23,0 chr1 2100661 . C . PASS END=2100662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 2100663 . C . PASS END=2100663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:22,0 chr1 2100664 . C . PASS END=2100700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,847:0,69,255:25,0 chr1 2100701 . C . PASS END=2100703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2100704 . A . PASS END=2100748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,65,255:26,0 chr1 2100749 . C . PASS END=2100751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2100752 . C . PASS END=2100761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,970:0,78,255:26,0 chr1 2100762 . C . PASS END=2100768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 2100769 . A . PASS END=2100772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2100773 . G . PASS END=2100775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2100776 . C . PASS END=2100776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 2100777 . C . PASS END=2100803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:31,0 chr1 2100804 . T . PASS END=2100805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 2100806 . C . PASS END=2100806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 2100807 . T . PASS END=2100807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 2100808 . G . PASS END=2100814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1127:0,93,255:31,0 chr1 2100815 . T . PASS END=2100815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 2100816 . G . PASS END=2100819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 2100820 . C . PASS END=2100820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 2100821 . T . PASS END=2100822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 2100823 . C . PASS END=2100827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 2100828 . C . PASS END=2100831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2100832 . G . PASS END=2100851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,976:0,68,255:26,0 chr1 2100852 . T . PASS END=2100852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 2100853 . G . PASS END=2100876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 2100877 . G . PASS END=2100878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 2100879 . C . PASS END=2100885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,984:0,65,255:26,0 chr1 2100886 . G . PASS END=2100889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2100890 . G . PASS END=2100896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 2100897 . G . PASS END=2100901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 2100902 . A . PASS END=2100902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 2100903 . G . PASS END=2100906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 2100907 . G . PASS END=2100907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 2100908 . C . PASS END=2100912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 2100913 . G . PASS END=2100913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 2100914 . T . PASS END=2100915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2100916 . T . PASS END=2100920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 2100921 . A . PASS END=2100922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 2100923 . G . PASS END=2100923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:27,0 chr1 2100924 . T . PASS END=2100936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1058:0,87,255:30,0 chr1 2100937 . C . PASS END=2100937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 2100938 . G . PASS END=2100959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1150:0,90,255:33,0 chr1 2100960 . G . PASS END=2100960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr1 2100961 . T . PASS END=2100970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1311:0,105,255:36,0 chr1 2100971 . T . PASS END=2100971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:35,0 chr1 2100972 . T . PASS END=2100976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1289:0,105,255:36,0 chr1 2100977 . A . PASS END=2100977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:33,0 chr1 2100978 . C . PASS END=2101014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,86,255:36,0 chr1 2101015 . C . PASS END=2101028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:26:0,68,1014:0,68,255:25,0 chr1 2101029 . T . PASS END=2101029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:22,0 chr1 2101030 . G . PASS END=2101042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 2101043 . G . PASS END=2101043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 2103494 . G . PASS END=2103503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,917:0,62,255:26,0 chr1 2103504 . G . PASS END=2103512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:31,0 chr1 2103513 . T . PASS END=2103513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 2103514 . G . PASS END=2103515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 2103516 . A . PASS END=2103516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 2103517 . T . PASS END=2103589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1147:0,80,255:37,0 chr1 2103590 . G . PASS END=2103590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 2103591 . G . PASS END=2103610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1164:0,83,255:33,0 chr1 2103611 . A . PASS END=2103616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1084:0,74,255:26,0 chr1 2103617 . C . PASS END=2103619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2103620 . C . PASS END=2103629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 2103740 . G . PASS END=2103777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,884:0,61,255:26,0 chr1 2103778 . C . PASS END=2103778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr1 2103779 . G . PASS END=2103779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2103780 . G . PASS END=2103781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 2103782 . A . PASS END=2103816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,951:0,87,255:29,0 chr1 2103817 . A . PASS END=2103827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:23,0 chr1 2105336 . G . PASS END=2105336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 2105337 . G . PASS END=2105358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:26,0 chr1 2105359 . C . PASS END=2105394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:31,0 chr1 2105395 . T . PASS END=2105425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr1 2105426 . A . PASS END=2105426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 2105427 . C . PASS END=2105428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 2105429 . T . PASS END=2105429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 2105430 . G . PASS END=2105439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 2105440 . G . PASS END=2105455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 2106193 . T . PASS END=2106272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:38:0,94,1380:0,94,255:40,0 chr1 2106663 . G . PASS END=2106752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:45:0,120,1800:0,134,255:40,0 chr1 2111753 . A . PASS END=2111965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:36:0,90,1323:0,95,255:40,0 chr1 2113271 . G . PASS END=2113300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1332:0,84,255:40,0 chr1 2113368 . C . PASS END=2113404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 2113405 . C . PASS END=2113413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:21:0,57,855:0,62,255:19,0 chr1 2113414 . G . PASS END=2113414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2113415 . T . PASS END=2113415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2113416 . C . PASS END=2113445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,894:0,62,255:25,0 chr1 2113446 . C . PASS END=2113446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 2113447 . T . PASS END=2113467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,848:0,69,255:24,0 chr1 2113468 . A . PASS END=2113468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:22,0 chr1 2113469 . C . PASS END=2113470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2113471 . C . PASS END=2113472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 2113473 . G . PASS END=2113480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2113481 . A . PASS END=2113533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 2113534 . T . PASS END=2113534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 2113535 . G . PASS END=2113553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,585:0,54,255:19,0 chr1 2113554 . T . PASS END=2113559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 2113560 . T . PASS END=2113598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,605:0,40,255:19,0 chr1 2113599 . C . PASS END=2113609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 2113610 . T . PASS END=2113640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,641:0,41,255:19,0 chr1 2113641 . T . PASS END=2113650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:20,0 chr1 2113651 . T . PASS END=2113662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr1 2113663 . T . PASS END=2113663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 2113664 . G . PASS END=2113671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 2113672 . T . PASS END=2113675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:12,0 chr1 2113676 . C . PASS END=2113676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:10,0 chr1 2113677 . C . PASS END=2113679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:31:16:0,31,535:0,31,255:13,0 chr1 2113680 . G . PASS END=2113681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 2113682 . A . PASS END=2113693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr1 2113694 . G . PASS END=2113694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:10,0 chr1 2113695 . G . PASS END=2113699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 2113700 . A . PASS END=2113700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 2113701 . C . PASS END=2113732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:12,0 chr1 2113733 . C . PASS END=2113733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 2113734 . T . PASS END=2113740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 2113741 . C . PASS END=2113741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 2113742 . A . PASS END=2113747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 2113748 . C . PASS END=2113748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 2113749 . T . PASS END=2113756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 2113757 . A . PASS END=2113757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 2113758 . G . PASS END=2113763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:12,0 chr1 2113764 . G . PASS END=2113764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 2113765 . A . PASS END=2113768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 2113769 . T . PASS END=2113769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 2113770 . C . PASS END=2113770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 2113771 . T . PASS END=2113778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 2113779 . A . PASS END=2113779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 2113780 . T . PASS END=2113793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:11,0 chr1 2113794 . G . PASS END=2113794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 2113795 . A . PASS END=2113810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:13,0 chr1 2113811 . G . PASS END=2113811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 2113812 . C . PASS END=2113815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 2113816 . A . PASS END=2113817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr1 2113818 . C . PASS END=2113834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,459:0,39,255:13,0 chr1 2113835 . G . PASS END=2113862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:17,0 chr1 2113863 . G . PASS END=2113863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 2113864 . G . PASS END=2113867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 2113868 . G . PASS END=2113868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 2113869 . G . PASS END=2113874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 2113875 . C . PASS END=2113885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 2113886 . T . PASS END=2113886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 2113887 . G . PASS END=2113887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2113888 . C . PASS END=2113906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 2113907 . G . PASS END=2113939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,574:0,44,255:19,0 chr1 2113940 . T . PASS END=2113943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2113944 . T . PASS END=2113956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,721:0,47,255:19,0 chr1 2113957 . C . PASS END=2113960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 2113961 . T . PASS END=2113961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 2113962 . T . PASS END=2113973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2113974 . A . PASS END=2113974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2113975 . G . PASS END=2113982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2113983 . G . PASS END=2113989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2113990 . G . PASS END=2113992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 2113993 . T . PASS END=2113993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 2113994 . G . PASS END=2114001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 2114002 . A . PASS END=2114002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 2114003 . T . PASS END=2114019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 2114020 . C . PASS END=2114025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr1 2114026 . G . PASS END=2114026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:18,0 chr1 2114027 . G . PASS END=2114057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr1 2114058 . T . PASS END=2114061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 2114062 . T . PASS END=2114066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2114067 . C . PASS END=2114073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 2114074 . A . PASS END=2114077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2114078 . A . PASS END=2114078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2114079 . C . PASS END=2114082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 2114083 . G . PASS END=2114109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,829:0,66,255:26,0 chr1 2114110 . G . PASS END=2114111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2114112 . A . PASS END=2114136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,915:0,62,255:25,0 chr1 2114137 . A . PASS END=2114138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,831:0,44,255:23,0 chr1 2114139 . C . PASS END=2114139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 2114140 . C . PASS END=2114140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 2114141 . T . PASS END=2114147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 2114148 . T . PASS END=2114148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 2114149 . G . PASS END=2114151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 2114152 . G . PASS END=2114152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 2114153 . G . PASS END=2114159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 2116022 . C . PASS END=2116023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 2116024 . G . PASS END=2116024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 2116025 . G . PASS END=2116029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr1 2116030 . G . PASS END=2116030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 2116031 . A . PASS END=2116031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr1 2116032 . A . PASS END=2116137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1243:0,80,255:38,0 chr1 2116361 . G . PASS END=2116420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1212:0,87,255:40,0 chr1 2116421 . A . PASS END=2116421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:47:39:0,47,1238:0,47,255:34,0 chr1 2116422 . T . PASS END=2116422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 2116423 . T . PASS END=2116423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1290:0,70,255:34,0 chr1 2116424 . G . PASS END=2116448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1258:0,81,255:37,0 chr1 2116717 . T . PASS END=2116720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 2116721 . G . PASS END=2116730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,631:0,43,255:19,0 chr1 2116731 . A . PASS END=2116731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 2116732 . G . PASS END=2116735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 2116736 . C . PASS END=2116736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 2116737 . A . PASS END=2116737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 2116738 . C . PASS END=2116738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 2116739 . A . PASS END=2116739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 2116740 . T . PASS END=2116742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 2116743 . T . PASS END=2116744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 2116745 . C . PASS END=2116745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 2116746 . A . PASS END=2116747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,706:0,46,255:21,0 chr1 2116748 . G . PASS END=2116748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 2116749 . G . PASS END=2116750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 2116751 . A . PASS END=2116751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2116752 . A . PASS END=2116752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 2116753 . C . PASS END=2116753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2116754 . A . PASS END=2116754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr1 2116755 . G . PASS END=2116757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 2116758 . C . PASS END=2116759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 2116760 . C . PASS END=2116762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 2116763 . T . PASS END=2116763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 2116764 . G . PASS END=2116764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:19,0 chr1 2116765 . C . PASS END=2116765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 2116766 . A . PASS END=2116766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 2116767 . C . PASS END=2116767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2116768 . T . PASS END=2116768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:19,0 chr1 2116769 . G . PASS END=2116783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,900:0,61,255:24,0 chr1 2116784 . G . PASS END=2116784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 2116785 . A . PASS END=2116785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 2116786 . A . PASS END=2116797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,856:0,72,255:24,0 chr1 2116798 . A . PASS END=2116852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,574:0,41,255:19,0 chr1 2116853 . T . PASS END=2116853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 2116854 . T . PASS END=2116862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 2116863 . G . PASS END=2116877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 2116878 . T . PASS END=2116878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,433:0,25,255:9,0 chr1 2116879 . C . PASS END=2116886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 2116887 . C . PASS END=2116888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2116889 . A . PASS END=2116890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2116891 . C . PASS END=2116898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 2116899 . A . PASS END=2116899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:6,0 chr1 2116900 . G . PASS END=2116910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 2116911 . T . PASS END=2116952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr1 2117443 . C . PASS END=2117444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 2117445 . C . PASS END=2117446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 2117447 . C . PASS END=2117447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 2117448 . A . PASS END=2117455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,632:0,60,255:24,0 chr1 2117456 . G . PASS END=2117456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 2117457 . C . PASS END=2117463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,886:0,75,255:25,0 chr1 2117464 . G . PASS END=2117482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:31,0 chr1 2117483 . T . PASS END=2117483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 2117484 . A . PASS END=2117533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1127:0,86,255:35,0 chr1 2117534 . T . PASS END=2117536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:36,0 chr1 2117537 . G . PASS END=2117584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1210:0,86,255:36,0 chr1 2117585 . T . PASS END=2117591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 2117592 . C . PASS END=2117599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:26:0,54,810:0,78,255:19,0 chr1 2117600 . G . PASS END=2117601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 2117602 . A . PASS END=2117604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2117605 . T . PASS END=2117624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 2117625 . C . PASS END=2117650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 2118597 . T . PASS END=2118632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1139:0,80,255:33,0 chr1 2118633 . C . PASS END=2118645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:26:0,74,1039:0,74,255:26,0 chr1 2121148 . T . PASS END=2121155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1333:0,95,255:38,0 chr1 2121156 . T . PASS END=2121196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1308:0,92,255:38,0 chr1 2121197 . C . PASS END=2121216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:33,0 chr1 2121217 . C . PASS END=2121220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr1 2121490 . A . PASS END=2121514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,825:0,72,255:25,0 chr1 2121515 . T . PASS END=2121515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,726:0,22,255:20,0 chr1 2121516 . G . PASS END=2121518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2121519 . A . PASS END=2121520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,738:0,55,255:21,0 chr1 2121521 . C . PASS END=2121525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 2121526 . T . PASS END=2121530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 2121531 . G . PASS END=2121541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:21,0 chr1 2121542 . C . PASS END=2121544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 2121545 . A . PASS END=2121545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr1 2121546 . C . PASS END=2121582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,483:0,45,255:16,0 chr1 2121583 . T . PASS END=2121599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,540:0,32,255:13,0 chr1 2121600 . C . PASS END=2121609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:15,0 chr1 2121610 . T . PASS END=2121611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2121612 . C . PASS END=2121629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 2121630 . G . PASS END=2121638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 2121639 . T . PASS END=2121639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 2121640 . G . PASS END=2121654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:25,0 chr1 2121655 . G . PASS END=2121663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:30,0 chr1 2121664 . A . PASS END=2121664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 2121665 . C . PASS END=2121670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 2121671 . A . PASS END=2121680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 2121681 . T . PASS END=2121681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2121682 . T . PASS END=2121682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 2121683 . T . PASS END=2121746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,979:0,83,255:33,0 chr1 2121747 . A . PASS END=2121747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:26,0 chr1 2121748 . C . PASS END=2121752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 2121753 . C . PASS END=2121780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr1 2121781 . C . PASS END=2121783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 2121784 . C . PASS END=2121786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 2121787 . T . PASS END=2121794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:21:0,57,855:0,63,255:19,0 chr1 2121795 . G . PASS END=2121798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 2121799 . T . PASS END=2121835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:19,0 chr1 2121836 . G . PASS END=2121836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 2121837 . G . PASS END=2121902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,619:0,51,255:19,0 chr1 2121903 . G . PASS END=2121905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2121906 . C . PASS END=2121909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 2121910 . G . PASS END=2121912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2121913 . A . PASS END=2121915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2121916 . T . PASS END=2121916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 2121917 . T . PASS END=2121967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,637:0,44,255:19,0 chr1 2121968 . T . PASS END=2121982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 2121983 . C . PASS END=2122000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 2122001 . T . PASS END=2122002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 2122003 . G . PASS END=2122032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,570:0,51,255:18,0 chr1 2124301 . A . PASS END=2124307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:19,0 chr1 2124308 . G . PASS END=2124329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:26,0 chr1 2124330 . T . PASS END=2124344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,942:0,84,255:28,0 chr1 2124345 . T . PASS END=2124345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 2124346 . T . PASS END=2124361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 2124362 . T . PASS END=2124362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 2124363 . G . PASS END=2124395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1119:0,90,255:31,0 chr1 2124396 . T . PASS END=2124396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 2124397 . C . PASS END=2124398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 2124399 . C . PASS END=2124399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 2124400 . G . PASS END=2124400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 2124401 . A . PASS END=2124414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,994:0,70,255:26,0 chr1 2125078 . C . PASS END=2125088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 2125089 . C . PASS END=2125089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 2125090 . T . PASS END=2125090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 2125091 . C . PASS END=2125091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 2125092 . C . PASS END=2125102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 2125103 . T . PASS END=2125108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 2125109 . A . PASS END=2125109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2125110 . G . PASS END=2125120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 2125121 . C . PASS END=2125121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 2125122 . C . PASS END=2125130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 2125131 . C . PASS END=2125145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,296:0,27,255:9,0 chr1 2125146 . C . PASS END=2125157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 2125158 . G . PASS END=2125158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 2125159 . G . PASS END=2125162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 2125163 . C . PASS END=2125163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 2125164 . C . PASS END=2125165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2125166 . T . PASS END=2125166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 2125167 . G . PASS END=2125182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 2125183 . G . PASS END=2125183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 2125184 . G . PASS END=2125184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2125185 . G . PASS END=2125185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 2125186 . C . PASS END=2125192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2125193 . G . PASS END=2125193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 2125194 . C . PASS END=2125194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 2125195 . A . PASS END=2125201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2125202 . T . PASS END=2125202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 2125203 . G . PASS END=2125204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2125205 . C . PASS END=2125205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 2125206 . G . PASS END=2125209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 2125210 . G . PASS END=2125210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 2125211 . A . PASS END=2125215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 2125216 . A . PASS END=2125222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2125223 . C . PASS END=2125235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 2125236 . A . PASS END=2125236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 2125237 . A . PASS END=2125267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 2125268 . G . PASS END=2125273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2125274 . G . PASS END=2125287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 2125288 . C . PASS END=2125288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 2125289 . A . PASS END=2125291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 2125292 . A . PASS END=2125293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 2125294 . A . PASS END=2125306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,419:0,36,255:12,0 chr1 2125307 . C . PASS END=2125314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 2125315 . A . PASS END=2125315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 2125316 . A . PASS END=2125335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 2125336 . C . PASS END=2125338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2125339 . C . PASS END=2125340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2125341 . C . LowGQ END=2125341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 2125342 . C . PASS END=2125349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 2125437 . C . PASS END=2125457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,684:0,47,255:20,0 chr1 2125458 . T . PASS END=2125474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,752:0,63,255:21,0 chr1 2125475 . C . PASS END=2125475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 2125476 . C . PASS END=2125494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:22,0 chr1 2125495 . A . PASS END=2125495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 2125496 . C . PASS END=2125504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr1 2125505 . G . PASS END=2125505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 2125506 . T . PASS END=2125509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 2125510 . T . PASS END=2125514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:23:0,51,765:0,56,255:18,0 chr1 2125515 . C . PASS END=2125523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,862:0,61,255:22,0 chr1 2125524 . C . PASS END=2125531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,1 chr1 2125532 . C . PASS END=2125539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 2125540 . C . PASS END=2125542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 2125543 . A . PASS END=2125543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:17,0 chr1 2125544 . G . PASS END=2125552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,658:0,43,255:18,0 chr1 2125553 . A . PASS END=2125553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 2125554 . G . PASS END=2125561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,621:0,40,255:19,0 chr1 2125562 . C . PASS END=2125562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 2125563 . G . PASS END=2125566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:17,0 chr1 2125567 . G . PASS END=2125567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:15,0 chr1 2125568 . A . PASS END=2125570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,605:0,40,255:15,0 chr1 2125571 . G . PASS END=2125571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:14,0 chr1 2125572 . C . PASS END=2125572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:12,0 chr1 2126127 . C . LowDepth;LowGQ END=2126138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:0,0 chr1 2126139 . C G, 5.46 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4603e+00,4.4702e+00,4.4605e+00,4.0230e+01,3.9240e+01,4.3230e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,1,0 chr1 2126140 . G . LowDepth;LowGQ END=2126176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 2126177 . C . LowDepth;LowGQ END=2126188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 2129446 . C . PASS END=2129465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:25,0 chr1 2129466 . G . PASS END=2129469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 2129470 . T . PASS END=2129470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 2129471 . C . PASS END=2129476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1264:0,90,255:34,0 chr1 2129477 . G . PASS END=2129477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 2129478 . A . PASS END=2129484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1260:0,105,255:36,0 chr1 2129485 . G . PASS END=2129485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:35,0 chr1 2129486 . G . PASS END=2129570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1215:0,83,255:40,0 chr1 2129571 . A . PASS END=2129581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:25,0 chr1 2130193 . C . PASS END=2130244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr1 2130245 . A . PASS END=2130247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 2130248 . G . PASS END=2130249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 2130250 . G . PASS END=2130252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 2130253 . G . PASS END=2130255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 2130256 . C . PASS END=2130263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:14:0,35,585:0,35,255:14,0 chr1 2130264 . C . PASS END=2130264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2130265 . A . PASS END=2130276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr1 2130277 . G . PASS END=2130312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:17,0 chr1 2130313 . T . PASS END=2130313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 2130314 . G . PASS END=2130326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,569:0,51,255:18,0 chr1 2130327 . T . PASS END=2130327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 2130328 . G . PASS END=2130328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 2130329 . G . PASS END=2130332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:25,0 chr1 2130333 . A . PASS END=2130333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 2130334 . C . PASS END=2130361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,917:0,62,255:25,0 chr1 2130362 . A . PASS END=2130362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,744:0,20,255:23,0 chr1 2130363 . G . PASS END=2130367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 2130368 . T . PASS END=2130368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 2130369 . T . PASS END=2130394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,860:0,61,255:26,0 chr1 2130395 . G . PASS END=2130395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 2130396 . G . PASS END=2130416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:24,0 chr1 2130417 . G . PASS END=2130427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,720:0,47,255:18,0 chr1 2132489 . C . PASS END=2132500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr1 2132501 . G . PASS END=2132514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 2132515 . A . PASS END=2132519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2132520 . A . PASS END=2132520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2132521 . A . PASS END=2132524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 2132525 . G . PASS END=2132661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:30:0,83,1224:0,83,255:40,0 chr1 2132662 . C . PASS END=2132662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 2132663 . C . PASS END=2132664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 2135003 . C . PASS END=2135003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2135004 . T . PASS END=2135010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:21,0 chr1 2135011 . G . PASS END=2135011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 2135012 . A . PASS END=2135014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:25,0 chr1 2135015 . T . PASS END=2135015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:24,0 chr1 2135016 . G . PASS END=2135030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 2135031 . T . PASS END=2135041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:27,0 chr1 2135042 . G . PASS END=2135061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 2135062 . T . PASS END=2135062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 2135063 . C . PASS END=2135069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr1 2137575 . C . PASS END=2137663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,102,1530:0,121,255:40,0 chr1 2137744 . C . PASS END=2137830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:35,0 chr1 2137831 . C . PASS END=2137833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 2144366 . T . PASS END=2144375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 2144376 . C . PASS END=2144380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2144381 . C . PASS END=2144384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2144385 . A . PASS END=2144398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 2144399 . C . PASS END=2144401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 2144402 . C . PASS END=2144402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 2144403 . G . PASS END=2144423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:13,0 chr1 2144424 . C . PASS END=2144427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,454:0,42,255:14,0 chr1 2144428 . T . PASS END=2144441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 2144442 . T . PASS END=2144442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 2144443 . C . PASS END=2144443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr1 2144444 . C . PASS END=2144445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2144446 . A . PASS END=2144446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2144447 . G . PASS END=2144447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:11,0 chr1 2144448 . G . PASS END=2144452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 2144453 . A . PASS END=2144453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 2144454 . T . PASS END=2144454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,512:0,21,255:14,0 chr1 2144455 . C . PASS END=2144455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 2144456 . C . PASS END=2144457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,545:0,48,255:16,0 chr1 2144458 . G . PASS END=2144458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:14,0 chr1 2144459 . G . PASS END=2144466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 2144467 . T . PASS END=2144467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:15,0 chr1 2144468 . C . PASS END=2144468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 2144469 . C . PASS END=2144469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 2144470 . G . PASS END=2144470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 2144471 . T . PASS END=2144483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr1 2144484 . C . PASS END=2144484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 2144485 . C . PASS END=2144489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 2144490 . C . PASS END=2144491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 2144492 . G . PASS END=2144505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:18,0 chr1 2144506 . C . PASS END=2144506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,605:0,18,255:17,0 chr1 2144507 . A . PASS END=2144509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:18,0 chr1 2144510 . G . PASS END=2144510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 2144511 . C . PASS END=2144518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr1 2144519 . T . PASS END=2144519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,0 chr1 2144520 . T . PASS END=2144520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,680:0,30,255:19,0 chr1 2144521 . C . PASS END=2144539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr1 2144540 . T . PASS END=2144540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 2144541 . C . PASS END=2144547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 2144548 . T . PASS END=2144548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 2144549 . G . PASS END=2144577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:22,0 chr1 2144578 . T . PASS END=2144579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2144580 . G . PASS END=2144581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2144582 . C . PASS END=2144597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 2144598 . C . PASS END=2144609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2144610 . A . PASS END=2144610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 2144611 . T . PASS END=2144614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 2144615 . T . PASS END=2144615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 2144616 . C . PASS END=2144616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2144617 . T . PASS END=2144617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 2144618 . A . PASS END=2144638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,837:0,66,255:25,0 chr1 2144639 . A . PASS END=2144640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 2144641 . G . PASS END=2144657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,963:0,78,255:26,0 chr1 2144658 . G . PASS END=2144658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2144659 . C . PASS END=2144670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,998:0,68,255:26,0 chr1 2144671 . C . PASS END=2144671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2144672 . G . PASS END=2144672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 2144673 . T . PASS END=2144692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 2144693 . G . PASS END=2144693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 2144694 . T . PASS END=2144696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 2144697 . C . PASS END=2144697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 2144698 . C . PASS END=2144735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1164:0,83,255:33,0 chr1 2144736 . C . PASS END=2144750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:26:0,63,945:0,74,255:25,0 chr1 2144751 . C . PASS END=2144757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:22,0 chr1 2144758 . G . PASS END=2144758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 2144759 . G . PASS END=2144759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 2144760 . T . PASS END=2144761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:21,1 chr1 2144762 . C . PASS END=2144762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:22,0 chr1 2144763 . C . PASS END=2144777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 2144778 . C . PASS END=2144778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:18,0 chr1 2144779 . A . PASS END=2144786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 2144787 . C . PASS END=2144787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 2144788 . A G, 47.82 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=0.693;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,10,0:0.400,0.000:25:6,7,0:9,3,0:47:83,0,50,358,527,885:255,0,255:14,0:4.7815e+01,9.3449e-05,5.3000e+01,3.5761e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,3,2,8:9,6,5,5 chr1 2144789 . G . PASS END=2144805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,62,255:25,0 chr1 2144806 . T . PASS END=2144806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 2144807 . C . PASS END=2144807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 2144808 . T . PASS END=2144810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 2144811 . G . PASS END=2144811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 2144812 . C . PASS END=2144813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 2144814 . G . PASS END=2144814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 2144815 . C . PASS END=2144825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 2144826 . T . PASS END=2144827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 2144828 . G . PASS END=2144828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 2144829 . C . PASS END=2144829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 2144830 . C . PASS END=2144845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 2144846 . C . PASS END=2144846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 2144847 . C . PASS END=2144847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2144848 . C . PASS END=2144852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 2144853 . G . PASS END=2144854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 2144855 . C . PASS END=2144855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 2144856 . G . PASS END=2144859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 2144860 . G . PASS END=2144860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 2144861 . G . PASS END=2144866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:22,0 chr1 2144867 . C . PASS END=2144867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 2144868 . C . PASS END=2144871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2144872 . C . PASS END=2144872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 2144873 . C . PASS END=2144881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 2144882 . C . PASS END=2144882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 2144883 . C . PASS END=2144892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 2144893 . C . PASS END=2144893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:19,0 chr1 2144894 . T . PASS END=2144899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 2144900 . C . PASS END=2144900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 2144901 . T . PASS END=2144904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2144905 . T . PASS END=2144905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr1 2144906 . T . PASS END=2144930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 2144931 . C . PASS END=2144932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:20,0 chr1 2144933 . C . PASS END=2144936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2144937 . C . PASS END=2144944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr1 2144945 . A . PASS END=2144963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 2144964 . A . PASS END=2144964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 2144965 . G . PASS END=2144966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2144967 . G . PASS END=2144967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 2144968 . G . PASS END=2144976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 2144977 . T . PASS END=2144981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 2144982 . G T, 91.68 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,11,0:0,4,0:42:129,45,0,544,45,544:255,45,0:0,0:9.1682e+01,4.1682e+01,2.9485e-04,4.5000e+02,7.6452e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,11:0,0,6,9 chr1 2144983 . C . PASS END=2144987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 2144988 . T . PASS END=2144988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 2144989 . C . PASS END=2144995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 2144996 . C . PASS END=2145019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,327:0,27,255:9,0 chr1 2160206 . A . PASS END=2160250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 2160251 . G . PASS END=2160262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 2160263 . A . PASS END=2160263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 2160264 . C . PASS END=2160281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 2160282 . T . PASS END=2160282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:7,0 chr1 2160283 . G . PASS END=2160298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 2160299 . C . PASS END=2160299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 2160300 . T . PASS END=2160303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 2160304 . C . LowGQ END=2160304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr1 2160305 . G . PASS END=2160342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,272:0,24,255:9,0 chr1 2160343 . C . PASS END=2160344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 2160345 . A . PASS END=2160350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 2160351 . A . PASS END=2160351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,286:0,13,255:8,0 chr1 2160352 . G . PASS END=2160356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 2160357 . G . LowGQ END=2160357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,155:9,0,164:5,0 chr1 2160358 . C . PASS END=2160358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 2160359 . G . PASS END=2160359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:5,0 chr1 2160360 . C . PASS END=2160426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,149:6,0 chr1 2160427 . G . PASS END=2160434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:7,0 chr1 2160435 . C . PASS END=2160457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 2160458 . G . PASS END=2160468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,238:0,24,238:9,0 chr1 2160469 . G . PASS END=2160475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 2160476 . T . PASS END=2160476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 2160477 . T . PASS END=2160494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr1 2160495 . C . PASS END=2160495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 2160496 . C . PASS END=2160496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 2160497 . A . PASS END=2160501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 2160502 . G . PASS END=2160504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2160505 . C . PASS END=2160512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr1 2160513 . C . PASS END=2160513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 2160514 . C . PASS END=2160533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,599:0,48,255:17,0 chr1 2160534 . T . PASS END=2160534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:14,0 chr1 2160535 . C . PASS END=2160538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 2160539 . T . PASS END=2160539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 2160540 . G . PASS END=2160546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 2160547 . G . PASS END=2160547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 2160548 . G . PASS END=2160644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,544:0,48,255:18,0 chr1 2160645 . A . PASS END=2160645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 2160646 . C . PASS END=2160647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 2160648 . T . PASS END=2160648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 2160649 . C . PASS END=2160649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 2160650 . T . PASS END=2160650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 2160651 . A . PASS END=2160655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2160656 . T . PASS END=2160658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2160659 . C . PASS END=2160674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:18,0 chr1 2160675 . A . PASS END=2160675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 2160676 . G . PASS END=2160684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 2160685 . C . PASS END=2160686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2160687 . T . PASS END=2160687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 2160688 . C . PASS END=2160688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2160689 . A . PASS END=2160691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 2160692 . G . PASS END=2160700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 2160701 . A . PASS END=2160722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,660:0,43,255:19,0 chr1 2160723 . C . PASS END=2160723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 2160724 . G . PASS END=2160729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 2160730 . G . PASS END=2160731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2160732 . T . PASS END=2160753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 2160754 . G . PASS END=2160754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 2160755 . C . PASS END=2160771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:18,0 chr1 2160772 . G . PASS END=2160785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:20,0 chr1 2160786 . C . PASS END=2160788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2160789 . A . PASS END=2160792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2160793 . G . PASS END=2160796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 2160797 . C . PASS END=2160799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 2160800 . T . PASS END=2160801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 2160802 . C . PASS END=2160819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,864:0,69,255:24,0 chr1 2160820 . C . PASS END=2160820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 2160821 . A . PASS END=2160830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 2160831 . T . PASS END=2160841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 2160842 . C . PASS END=2160849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2160850 . G . PASS END=2160879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 2160880 . C . PASS END=2160883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 2160884 . A . PASS END=2160885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 2160886 . G . PASS END=2160906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 2160907 . C . PASS END=2160957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,652:0,46,255:19,0 chr1 2160958 . C . PASS END=2160973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 2160974 . C . PASS END=2160974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 2160975 . A . PASS END=2160979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2160980 . T . PASS END=2160980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,581:0,49,255:20,0 chr1 2160981 . T . PASS END=2160983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2160984 . T . PASS END=2160984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 2160985 . G . PASS END=2160996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:24,0 chr1 2160997 . C . PASS END=2160997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 2160998 . A . PASS END=2161000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2161001 . G . PASS END=2161001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 2161002 . C . PASS END=2161020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr1 2161021 . C . PASS END=2161021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 2161022 . C . PASS END=2161022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 2161023 . A . PASS END=2161023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 2161024 . C . PASS END=2161024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 2161025 . T . PASS END=2161025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 2161026 . G . PASS END=2161044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 2161045 . C . PASS END=2161045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 2161046 . T . PASS END=2161048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2161049 . C . PASS END=2161049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 2161050 . G . PASS END=2161072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,720:0,47,255:19,0 chr1 2161073 . G . PASS END=2161073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 2161074 . A . PASS END=2161087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:18,0 chr1 2161088 . G . PASS END=2161088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 2161089 . A . PASS END=2161090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 2161091 . G . PASS END=2161091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:18,0 chr1 2161092 . A . PASS END=2161092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2161093 . G . PASS END=2161094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 2161095 . A . PASS END=2161108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,759:0,50,255:19,0 chr1 2161109 . C . PASS END=2161109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 2161110 . G . PASS END=2161110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2161111 . C . PASS END=2161112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 2161113 . G . PASS END=2161113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 2161114 . C . PASS END=2161114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:19,0 chr1 2161115 . C . PASS END=2161121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 2161122 . A . PASS END=2161122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 2161123 . C . PASS END=2161123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 2161124 . G . PASS END=2161125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 2161126 . G . LowGQ END=2161126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,579:12,0,255:17,0 chr1 2161127 . A . PASS END=2161127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2161128 . A . LowGQ END=2161128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,543:12,0,255:17,0 chr1 2161129 . G . PASS END=2161129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 2161130 . G . PASS END=2161130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 2161131 . A . PASS END=2161131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 2161132 . G . PASS END=2161132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 2161133 . A . PASS END=2161133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 2161134 . A . PASS END=2161135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,574:0,27,255:18,0 chr1 2161136 . T . PASS END=2161163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,615:0,41,255:19,0 chr1 2161164 . G . PASS END=2161165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 2161166 . G . PASS END=2161167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 2161168 . G . PASS END=2161168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 2161169 . C . PASS END=2161174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 2172133 . A . PASS END=2172143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:16:0,47,568:0,47,255:20,0 chr1 2172144 . T . PASS END=2172149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,671:0,63,255:21,0 chr1 2172150 . A . PASS END=2172150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 2172151 . T . PASS END=2172170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,786:0,66,255:26,0 chr1 2172171 . G . PASS END=2172191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr1 2172192 . G . PASS END=2172192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:30,0 chr1 2172193 . G . PASS END=2172208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1164:0,93,255:31,0 chr1 2172209 . G . PASS END=2172231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:25:0,62,925:0,62,255:27,0 chr1 2179034 . A . PASS END=2179038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 2179039 . T . PASS END=2179053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,537:0,42,255:18,0 chr1 2179054 . T . PASS END=2179054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 2179055 . G . PASS END=2179069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:18,0 chr1 2179070 . G . PASS END=2179187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 2179188 . T . PASS END=2179188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 2179189 . T . PASS END=2179190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 2179191 . C . PASS END=2179193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 2179194 . T . PASS END=2179195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 2179196 . T . PASS END=2179196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:21,0 chr1 2179197 . C . PASS END=2179198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 2179199 . T . PASS END=2179199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 2179200 . G . PASS END=2179204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 2179205 . C . PASS END=2179205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 2179206 . C . PASS END=2179221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:24,0 chr1 2179222 . G . PASS END=2179223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,59,255:19,0 chr1 2179224 . G . PASS END=2179224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2179225 . C . PASS END=2179225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:19,0 chr1 2179226 . A . PASS END=2179236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:22,0 chr1 2179237 . C . PASS END=2179237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 2179238 . C . PASS END=2179247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 2179248 . C . PASS END=2179271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:18:0,41,665:0,41,255:19,0 chr1 2179272 . C . PASS END=2179272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 2179273 . T . PASS END=2179301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,584:0,51,255:18,0 chr1 2179302 . T . PASS END=2179302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 2179303 . C . PASS END=2179311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr1 2179312 . G . PASS END=2179313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2179314 . G . PASS END=2179324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,474:0,42,255:14,0 chr1 2179325 . C . PASS END=2179338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 2179339 . C . PASS END=2179339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 2179340 . C . PASS END=2179340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:11,0 chr1 2179341 . C . PASS END=2179341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:11,0 chr1 2179342 . T . PASS END=2179345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 2179346 . A . PASS END=2179346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:9,0 chr1 2179347 . C . PASS END=2179348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 2179349 . C . PASS END=2179349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 2179350 . A . PASS END=2179357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 2179358 . C . PASS END=2179358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 2179359 . G . PASS END=2179370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,329:0,33,255:11,0 chr1 2179371 . A . PASS END=2179371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 2179372 . G . PASS END=2179399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,304:0,27,255:9,0 chr1 2179400 . C . PASS END=2179400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 2179401 . C . PASS END=2179405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 2179406 . T . PASS END=2179408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:7,0 chr1 2179409 . A . PASS END=2179413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 2179414 . T . LowGQ END=2179414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,247:3,0,250:7,0 chr1 2179415 . T . PASS END=2179415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2179416 . T . LowGQ END=2179416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,263:17,0,255:8,0 chr1 2179417 . G . PASS END=2179417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 2179418 . G . PASS END=2179420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr1 2179421 . C . PASS END=2179421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2179422 . T . PASS END=2179422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:9,0 chr1 2179423 . G . PASS END=2179424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 2179425 . T . PASS END=2179425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2179426 . G . PASS END=2179430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2179431 . T . PASS END=2179431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 2179432 . G . PASS END=2179432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2179433 . A . PASS END=2179433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:9,0 chr1 2179434 . C . PASS END=2179436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 2179437 . G . PASS END=2179437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 2179438 . G . PASS END=2179439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 2179440 . G . PASS END=2179440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 2179441 . G . PASS END=2179446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 2179447 . T . PASS END=2179448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 2179449 . G . PASS END=2179451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr1 2179452 . G . PASS END=2179452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 2179453 . G . PASS END=2179466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 2179467 . G . PASS END=2179486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:9,0 chr1 2179487 . C . PASS END=2179502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,180:0,18,180:6,0 chr1 2179503 . A . PASS END=2179503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 2179504 . G . PASS END=2179504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 2179505 . G . PASS END=2179510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 2234410 . A . PASS END=2234410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 2234417 . G . PASS END=2234428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:26,0 chr1 2234429 . C . PASS END=2234433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 2234434 . G . PASS END=2234434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 2234435 . G . PASS END=2234444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 2234445 . G . PASS END=2234447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr1 2234448 . C . PASS END=2234448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2234449 . C . PASS END=2234455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2234456 . G . PASS END=2234459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 2234460 . A . PASS END=2234460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 2234461 . C . PASS END=2234464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 2234465 . T . PASS END=2234465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:26,0 chr1 2234466 . C . PASS END=2234466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 2234467 . T . PASS END=2234473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:30,0 chr1 2234474 . T . PASS END=2234474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1040:0,54,255:27,0 chr1 2234475 . C . PASS END=2234484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 2234485 . T . PASS END=2234488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:28,0 chr1 2234489 . G . PASS END=2234489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:25,0 chr1 2234490 . A . PASS END=2234491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 2234492 . A . PASS END=2234501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 2234502 . C . PASS END=2234512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1069:0,71,255:26,0 chr1 2234513 . C . PASS END=2234513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2234514 . T . PASS END=2234542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,887:0,64,255:26,0 chr1 2234724 . A . PASS END=2234728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,970:0,78,255:26,0 chr1 2234729 . G . PASS END=2234734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:30,0 chr1 2234735 . T . PASS END=2234735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 2234736 . G . PASS END=2234779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1042:0,90,255:34,0 chr1 2234780 . C . PASS END=2234824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 2234825 . C . PASS END=2234825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 2234826 . C . PASS END=2234826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2234827 . T . PASS END=2234831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 2234832 . C . PASS END=2234836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2234837 . C . PASS END=2234839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2235271 . C . PASS END=2235271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 2235279 . C . PASS END=2235288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 2235289 . T . PASS END=2235289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 2235290 . A . PASS END=2235292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2235293 . A . PASS END=2235293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,443:0,15,255:14,0 chr1 2235294 . G . PASS END=2235294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 2235295 . A . PASS END=2235295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 2235296 . G . PASS END=2235303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr1 2235304 . A . PASS END=2235304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,429:0,6,255:14,0 chr1 2235305 . C . PASS END=2235305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 2235306 . A . PASS END=2235306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 2235307 . G . PASS END=2235351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,615:0,41,255:19,0 chr1 2235352 . G . PASS END=2235359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 2235360 . C . PASS END=2235363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,775:0,50,255:19,0 chr1 2235364 . C . PASS END=2235371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:20,0 chr1 2235372 . T . PASS END=2235391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,623:0,54,255:19,0 chr1 2235392 . C . PASS END=2235392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 2235393 . C . PASS END=2235438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,599:0,41,255:18,0 chr1 2235439 . A . PASS END=2235457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr1 2235458 . C . PASS END=2235465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 2235466 . A . PASS END=2235471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2235472 . G . PASS END=2235496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,1041:0,80,255:31,0 chr1 2235497 . A . PASS END=2235507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,80,255:26,0 chr1 2235508 . G . PASS END=2235512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 2235513 . G . PASS END=2235515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr1 2235516 . G . PASS END=2235516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 2235517 . G . PASS END=2235517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 2235518 . T . PASS END=2235523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:28,0 chr1 2235524 . T . PASS END=2235524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 2235525 . T . PASS END=2235531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:29,0 chr1 2235532 . A . PASS END=2235532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 2235533 . G . PASS END=2235537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 2235538 . G . PASS END=2235538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 2235539 . A . PASS END=2235540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 2235541 . T . PASS END=2235541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 2235542 . G . PASS END=2235547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 2235732 . T . PASS END=2235732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 2235733 . C . PASS END=2235733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:12,0 chr1 2235734 . A . PASS END=2235734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:11,0 chr1 2235735 . C . PASS END=2235740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:38:16:0,38,585:0,38,255:13,0 chr1 2235741 . C . PASS END=2235742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2235743 . T . PASS END=2235743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 2235744 . T . PASS END=2235763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:18,0 chr1 2235764 . T . PASS END=2235766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 2235767 . T . PASS END=2235767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 2235768 . T . PASS END=2235769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 2235770 . A . PASS END=2235770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 2235771 . C . PASS END=2235784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,725:0,60,255:23,0 chr1 2235785 . G . PASS END=2235785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 2235786 . C . PASS END=2235789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,740:0,69,255:23,0 chr1 2235790 . G . PASS END=2235791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 2235792 . A . PASS END=2235795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 2235796 . G . PASS END=2235796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 2235797 . G . PASS END=2235805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 2235806 . G . PASS END=2235806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 2235807 . G . PASS END=2235807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 2235808 . T . PASS END=2235808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 2235809 . G . PASS END=2235837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 2235838 . T . PASS END=2235838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:19,0 chr1 2235839 . G . PASS END=2235902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,815:0,62,255:26,0 chr1 2235903 . T . PASS END=2235908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 2235909 . G . PASS END=2235914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 2235915 . T . PASS END=2235915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2235916 . G . PASS END=2235921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2235922 . C . PASS END=2235922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 2235923 . A . PASS END=2235923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2235924 . A . PASS END=2235924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 2235925 . G . PASS END=2235933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 2235934 . A . PASS END=2235934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 2235935 . G . PASS END=2235952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,750:0,66,255:23,0 chr1 2235953 . G . PASS END=2236000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,520:0,40,255:19,0 chr1 2236001 . C . PASS END=2236009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 2236010 . C . PASS END=2236010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 2236011 . G . PASS END=2236024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:11,0 chr1 2236030 . C . PASS END=2236030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2237459 . G . PASS END=2237464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 2237465 . G . PASS END=2237483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 2237484 . A . PASS END=2237492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 2237493 . A . PASS END=2237507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr1 2237508 . C . PASS END=2237511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 2237512 . G . PASS END=2237526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 2237527 . G . PASS END=2237531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:15,0 chr1 2237532 . A . PASS END=2237532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 2237533 . G . PASS END=2237544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 2237545 . T . PASS END=2237545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 2237546 . C . PASS END=2237557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 2237558 . A . PASS END=2237558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 2237559 . A . PASS END=2237576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,537:0,48,255:17,0 chr1 2237577 . A . PASS END=2237577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr1 2237578 . G . PASS END=2237595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,562:0,54,255:19,0 chr1 2237596 . G . PASS END=2237615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 2237616 . A . PASS END=2237626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 2237627 . C . PASS END=2237627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 2237628 . A . PASS END=2237655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 2237656 . G . PASS END=2237689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 2237695 . C . PASS END=2237695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 2238016 . A . PASS END=2238017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 2238018 . C . PASS END=2238018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 2238019 . G . PASS END=2238019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 2238020 . A . PASS END=2238020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 2238021 . A . PASS END=2238023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:23,0 chr1 2238024 . C . PASS END=2238024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 2238025 . C . PASS END=2238033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:24,0 chr1 2238034 . A . PASS END=2238034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 2238035 . A . PASS END=2238036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 2238037 . C . PASS END=2238037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 2238038 . T . PASS END=2238038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 2238039 . G . PASS END=2238039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 2238040 . C . PASS END=2238042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 2238043 . C . PASS END=2238043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 2238044 . A . PASS END=2238046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:24,0 chr1 2238047 . C . PASS END=2238047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 2238048 . G . PASS END=2238137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 2238138 . A . PASS END=2238138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 2238139 . C . PASS END=2238149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 2238150 . G . PASS END=2238195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr1 2238196 . G . PASS END=2238204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 2252822 . T . PASS END=2252841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:18,0 chr1 2252842 . C . PASS END=2252842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 2252843 . T . PASS END=2252848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 2252849 . G . PASS END=2252849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 2252850 . C . PASS END=2252850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr1 2252851 . A . PASS END=2252851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 2252852 . G . PASS END=2252852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2252853 . C . PASS END=2252853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 2252854 . T . PASS END=2252854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr1 2252855 . G . PASS END=2252859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:22,0 chr1 2252860 . C . PASS END=2252860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 2252861 . G . PASS END=2252862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr1 2252863 . C . PASS END=2252863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 2252864 . C . PASS END=2252870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 2252871 . C . PASS END=2252871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 2252872 . T . PASS END=2252880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 2252881 . C . PASS END=2252881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,707:0,39,255:20,0 chr1 2252882 . T . PASS END=2252884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 2252885 . A . PASS END=2252885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,796:0,39,255:20,0 chr1 2252886 . G . PASS END=2252887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 2252888 . G . PASS END=2252888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 2252889 . C . PASS END=2252889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 2252890 . C . PASS END=2252890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:19,0 chr1 2252891 . T . PASS END=2252891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2252892 . T . PASS END=2252893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr1 2252894 . T . PASS END=2252894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2252895 . T . PASS END=2252895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 2252896 . C . PASS END=2252899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 2252900 . G . PASS END=2252904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,687:0,55,255:22,0 chr1 2252905 . G . PASS END=2252907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 2252908 . G . PASS END=2252908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 2252909 . T . PASS END=2252910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2252911 . G . PASS END=2252911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 2252912 . C . PASS END=2252914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,68,255:22,0 chr1 2252915 . G . PASS END=2252917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 2252918 . A . PASS END=2252922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,764:0,66,255:22,0 chr1 2252923 . T . LowGQ END=2252923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,485:6,0,255:18,0 chr1 2252924 . C . PASS END=2252924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:20,0 chr1 2252925 . T . PASS END=2252925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2252926 . T . PASS END=2252933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:19,0 chr1 2252934 . A . PASS END=2252938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 2252939 . C . PASS END=2252939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2252940 . A . PASS END=2252940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,552:0,16,255:17,0 chr1 2252941 . G . PASS END=2252942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2252943 . T . PASS END=2252949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,617:0,46,255:19,0 chr1 2252950 . A . PASS END=2252950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,632:0,13,255:15,0 chr1 2252951 . G . PASS END=2252953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:17,0 chr1 2252954 . C . PASS END=2252954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:15,0 chr1 2252955 . G . PASS END=2252959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr1 2252960 . C . PASS END=2252960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,521:0,37,255:15,0 chr1 2252961 . A . PASS END=2252976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,47,255:16,0 chr1 2252977 . A . PASS END=2253001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,32,255:13,0 chr1 2253002 . C . PASS END=2253017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 2253018 . C . PASS END=2253018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 2253605 . T . PASS END=2253630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:33:0,80,1023:0,80,255:37,0 chr1 2255536 . C . PASS END=2255539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 2255540 . G . PASS END=2255571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 2255572 . T . PASS END=2255582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 2263979 . C . PASS END=2263982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 2263983 . G . PASS END=2263983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 2263984 . A . PASS END=2263992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 2263993 . T . PASS END=2263993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 2263994 . G . PASS END=2263998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 2263999 . G . PASS END=2264045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,839:0,66,255:25,0 chr1 2264046 . G . PASS END=2264046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr1 2264047 . C . PASS END=2264047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 2264048 . C . PASS END=2264048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 2264049 . A . PASS END=2264059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 2264060 . A . PASS END=2264060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 2264061 . C . PASS END=2264067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr1 2264068 . T . PASS END=2264068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 2264069 . C . PASS END=2264074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 2264075 . A . PASS END=2264076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:24,0 chr1 2264077 . G . PASS END=2264095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,915:0,62,255:26,0 chr1 2264096 . T . PASS END=2264096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,771:0,47,255:24,0 chr1 2264097 . C . PASS END=2264102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 2264103 . T . PASS END=2264103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr1 2264104 . G . PASS END=2264116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr1 2264117 . C . PASS END=2264117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 2264118 . C . PASS END=2264119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 2264120 . C . PASS END=2264134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,50,255:16,0 chr1 2264135 . T . PASS END=2264135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 2264136 . C . PASS END=2264150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr1 2264151 . T . PASS END=2264158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 2264159 . C . PASS END=2264159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2264160 . C . PASS END=2264160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 2264161 . A . PASS END=2264165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 2264166 . A . PASS END=2264166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 2264167 . A . PASS END=2264178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 2264179 . C . PASS END=2264179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 2264180 . T . PASS END=2264184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 2264185 . T . PASS END=2264192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 2266247 . T . PASS END=2266258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:18,0 chr1 2266259 . G . PASS END=2266266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 2266267 . G . PASS END=2266267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 2266268 . C . PASS END=2266268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 2266269 . C . PASS END=2266269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 2266270 . T . PASS END=2266274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 2266275 . T . PASS END=2266286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2266287 . A . PASS END=2266292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2266293 . T . PASS END=2266306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr1 2266307 . C . PASS END=2266307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,2 chr1 2266308 . A . LowGQ END=2266308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,653:4,0,255:20,2 chr1 2266309 . G . PASS END=2266310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:22,0 chr1 2266311 . G . PASS END=2266324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,776:0,66,255:22,0 chr1 2266325 . G . PASS END=2266325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 2266326 . G . PASS END=2266327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 2266328 . T . PASS END=2266342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 2266343 . A . PASS END=2266343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:13,0 chr1 2266344 . G . PASS END=2266347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:20:0,39,585:0,60,255:13,0 chr1 2266348 . C . PASS END=2266356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,490:0,40,255:14,0 chr1 2266357 . G . PASS END=2266363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 2266364 . G . PASS END=2266368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:12:0,24,360:0,36,255:8,0 chr1 2266369 . G . PASS END=2266376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 2267908 . C . PASS END=2267923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr1 2267924 . G . PASS END=2267924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 2267925 . C . PASS END=2267925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 2267926 . T . PASS END=2267927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 2267928 . C . PASS END=2267936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 2267937 . G . PASS END=2267937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 2267938 . G . PASS END=2267946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 2267947 . C . PASS END=2267947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:21,0 chr1 2267948 . C . PASS END=2267962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 2267963 . C . PASS END=2267987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,692:0,57,255:19,0 chr1 2268156 . C . PASS END=2268167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:17,0 chr1 2268168 . G . PASS END=2268176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:23,0 chr1 2268177 . C . PASS END=2268177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 2268178 . A . PASS END=2268189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:23:0,68,833:0,68,255:27,0 chr1 2268190 . T . PASS END=2268263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:28:0,84,1047:0,84,255:37,0 chr1 2268264 . G . PASS END=2268264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:29,0 chr1 2268265 . G . PASS END=2268274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1241:0,89,255:30,0 chr1 2268275 . G . PASS END=2268275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 2268276 . C . PASS END=2268279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2268280 . T . PASS END=2268286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:24,0 chr1 2268287 . T . PASS END=2268288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 2268289 . G . PASS END=2268289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 2279940 . T . PASS END=2280001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1271:0,96,255:40,0 chr1 2286887 . C . PASS END=2286903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,878:0,75,255:25,0 chr1 2288871 . C . PASS END=2288879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,645:0,41,255:19,0 chr1 2288880 . C . PASS END=2288884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 2288885 . G . PASS END=2288886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr1 2288887 . G . PASS END=2288916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,807:0,66,255:24,0 chr1 2288917 . A . PASS END=2288918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 2288919 . G . PASS END=2288923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,906:0,72,255:24,0 chr1 2288924 . T . PASS END=2288924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 2288925 . C . PASS END=2288964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,856:0,62,255:24,0 chr1 2288965 . T . PASS END=2288965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 2288966 . C . PASS END=2288970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 2288971 . G . PASS END=2288971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 2288972 . G . PASS END=2288972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2288973 . C . PASS END=2288973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 2288974 . A . PASS END=2288976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2288977 . T . PASS END=2288977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:19,0 chr1 2288978 . C . PASS END=2288979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2288980 . G . PASS END=2288990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 2288991 . C . PASS END=2288998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 2288999 . G . PASS END=2289009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,735:0,47,255:19,0 chr1 2289010 . C . PASS END=2289010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr1 2289011 . A . PASS END=2289024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:17,0 chr1 2289025 . G . PASS END=2289032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 2289033 . A . PASS END=2289033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 2289034 . C . PASS END=2289034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2289035 . C . PASS END=2289037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2290027 . T . PASS END=2290154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,117,1755:0,134,255:40,0 chr1 2303920 . T . PASS END=2303921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2303922 . T . PASS END=2303922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,807:0,34,255:24,0 chr1 2303923 . T . PASS END=2303923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2303924 . G . PASS END=2303924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:25,0 chr1 2303925 . G . PASS END=2303928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2303929 . T . PASS END=2303931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,857:0,65,255:27,0 chr1 2303932 . C . PASS END=2303932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 2303933 . C . PASS END=2303933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:28,0 chr1 2303934 . C . PASS END=2303934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 2303935 . C . PASS END=2303935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 2303936 . G . PASS END=2303937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 2303938 . G . PASS END=2303938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:28,0 chr1 2303939 . G . PASS END=2303939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 2303940 . T . PASS END=2303940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:30,0 chr1 2303941 . C . PASS END=2303941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 2303942 . C . PASS END=2303957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1103:0,83,255:36,0 chr1 2303958 . T . PASS END=2303958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1191:0,77,255:35,0 chr1 2303959 . T . PASS END=2303963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1207:0,91,255:36,0 chr1 2303964 . G . PASS END=2303964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:33,0 chr1 2303965 . A . PASS END=2303986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1296:0,94,255:37,0 chr1 2303987 . T . PASS END=2303987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1186:0,50,255:33,0 chr1 2303988 . T . PASS END=2303988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:35,0 chr1 2303989 . C . PASS END=2304011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1213:0,88,255:35,0 chr1 2304012 . A . PASS END=2304012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:32,0 chr1 2304013 . C . PASS END=2304015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:34,0 chr1 2304016 . T . PASS END=2304016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1166:0,74,255:32,0 chr1 2304017 . C . PASS END=2304026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1105:0,85,255:33,0 chr1 2304027 . T . PASS END=2304027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:26,0 chr1 2304028 . G . PASS END=2304028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 2304029 . T . PASS END=2304030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,82,255:25,0 chr1 2305900 . C . PASS END=2305992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1127:0,80,255:38,0 chr1 2305993 . G . PASS END=2305996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 2310498 . T . PASS END=2310499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 2310500 . A . PASS END=2310509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 2310510 . G . PASS END=2310510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 2310511 . G . PASS END=2310516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 2310517 . A . PASS END=2310517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 2310518 . G . PASS END=2310529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,507:0,48,255:17,0 chr1 2310530 . G . PASS END=2310530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 2310531 . G . PASS END=2310539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,532:0,51,255:17,0 chr1 2310540 . A . PASS END=2310540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 2310541 . A . PASS END=2310549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,706:0,54,255:19,0 chr1 2310550 . G . PASS END=2310557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,717:0,60,255:21,0 chr1 2310558 . G . PASS END=2310570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 2310571 . T . PASS END=2310571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,624:0,60,255:20,0 chr1 2310572 . C . PASS END=2310572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2310573 . T . PASS END=2310580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 2310581 . G . PASS END=2310581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 2310582 . G . PASS END=2310582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2310583 . G . PASS END=2310587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr1 2310588 . A . PASS END=2310595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2310596 . T . PASS END=2310628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:18,0 chr1 2310629 . T . PASS END=2310629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 2310630 . C . PASS END=2310632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2310633 . T . PASS END=2310633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 2310634 . G . PASS END=2310643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 2310644 . T . PASS END=2310656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:11,0 chr1 2310657 . T . PASS END=2310666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 2316417 . C . PASS END=2316435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,937:0,65,255:25,0 chr1 2316436 . G . PASS END=2316436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 2316437 . C . PASS END=2316440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 2316441 . G . PASS END=2316504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:30:0,85,1155:0,85,255:40,0 chr1 2317246 . T . PASS END=2317336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,106,1345:0,106,255:40,0 chr1 2318858 . C . PASS END=2318873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:30,0 chr1 2318874 . G . PASS END=2318874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 2318875 . G . PASS END=2318877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,977:0,90,255:30,0 chr1 2318878 . A . PASS END=2318878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,822:0,56,255:27,0 chr1 2318879 . C . PASS END=2318893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1021:0,90,255:30,0 chr1 2318894 . A . PASS END=2318894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 2318895 . T . PASS END=2318914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1072:0,80,255:31,0 chr1 2318915 . T . PASS END=2318915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:26,0 chr1 2318916 . G . PASS END=2318917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 2318918 . C . PASS END=2318963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 2318964 . G . PASS END=2318968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:16,0 chr1 2319667 . C . PASS END=2319776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,116,1590:0,116,255:40,0 chr1 2321364 . C . PASS END=2321435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:52:0,120,1800:0,139,255:40,0 chr1 2322897 . C . PASS END=2322920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,501:0,48,255:18,0 chr1 2322921 . G . PASS END=2322921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 2322922 . G . PASS END=2322943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,613:0,40,255:19,0 chr1 2322944 . C . PASS END=2322957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,691:0,60,255:22,0 chr1 2322958 . G . PASS END=2322958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 2322959 . C . PASS END=2322960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2322961 . C . PASS END=2322961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 2322962 . G . PASS END=2322962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 2322963 . C . PASS END=2322964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 2322965 . G . PASS END=2322965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 2322966 . C . PASS END=2322968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2322969 . C . PASS END=2322969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:20,0 chr1 2322970 . C . PASS END=2322971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 2322972 . T . PASS END=2322972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,617:0,13,255:19,0 chr1 2324594 . A . PASS END=2324597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 2324598 . T . PASS END=2324598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 2324599 . C . PASS END=2324600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 2324601 . C . PASS END=2324602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr1 2324603 . G . PASS END=2324607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 2324608 . G . PASS END=2324608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 2324609 . A . PASS END=2324609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1092:0,87,255:29,0 chr1 2324610 . C . PASS END=2324610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 2324611 . T . PASS END=2324626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr1 2324627 . T . PASS END=2324628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 2324629 . T . PASS END=2324635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:29,0 chr1 2324636 . T . PASS END=2324636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:28,0 chr1 2324637 . T . PASS END=2324643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 2324644 . C . PASS END=2324646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 2324647 . G . PASS END=2324650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2324651 . A . PASS END=2324662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 2324663 . T . PASS END=2324663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:26,0 chr1 2324664 . T . PASS END=2324665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 2324666 . A . PASS END=2324666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:25,0 chr1 2324667 . A . PASS END=2324669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 2324670 . G . PASS END=2324670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2324697 . A . PASS END=2324713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:25,0 chr1 2324714 . A . PASS END=2324714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:23,0 chr1 2324715 . G . PASS END=2324752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:24,0 chr1 2324753 . G . PASS END=2324753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 2324754 . C . PASS END=2324754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2324755 . T . PASS END=2324755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 2324756 . T . PASS END=2324759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2324760 . T . PASS END=2324760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,666:0,46,255:19,0 chr1 2324761 . C . PASS END=2324772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:23,0 chr1 2324773 . A . PASS END=2324773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:21,0 chr1 2324774 . A . PASS END=2324779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,787:0,69,255:23,0 chr1 2324780 . A . PASS END=2324780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,674:0,36,255:20,0 chr1 2324781 . A . PASS END=2324786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2324787 . C . PASS END=2324787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 2324788 . C . PASS END=2324788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 2324789 . A . PASS END=2324789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 2324790 . G . PASS END=2324790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2324791 . A . PASS END=2324791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 2324792 . A . PASS END=2324794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 2327223 . T . PASS END=2327310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:50:0,120,1800:0,120,255:40,0 chr1 2328555 . A . PASS END=2328659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:55:0,120,1800:0,148,255:40,0 chr1 2330854 . G . PASS END=2330953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,128,255:40,0 chr1 2332296 . A . PASS END=2332353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,120,1800:0,123,255:40,0 chr1 2332354 . G . PASS END=2332374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,120,1800:0,124,255:40,0 chr1 2333536 . G . PASS END=2333585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr1 2333586 . G . PASS END=2333598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:28,0 chr1 2333599 . C . PASS END=2333600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 2333601 . G . PASS END=2333603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2333604 . C . PASS END=2333605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 2333606 . G . PASS END=2333751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1148:0,83,255:38,0 chr1 2333752 . T . PASS END=2333760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,83,255:26,0 chr1 2333761 . A . PASS END=2333761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr1 2333762 . C . PASS END=2333763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 2333764 . A . PASS END=2333764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 2333765 . T . PASS END=2333767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,939:0,64,255:26,0 chr1 2333768 . A . PASS END=2333776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 2333777 . T . PASS END=2333781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 2334474 . C . PASS END=2334486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:24:0,64,870:0,64,255:26,0 chr1 2334487 . A . PASS END=2334488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr1 2334489 . C . PASS END=2334489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 2334490 . G . PASS END=2334515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:35,0 chr1 2334516 . A . PASS END=2334516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:33,0 chr1 2334517 . G . PASS END=2334520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1183:0,91,255:35,0 chr1 2334521 . G . PASS END=2334521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:35,0 chr1 2334522 . T . PASS END=2334522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:34,0 chr1 2334523 . A . PASS END=2334541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1208:0,83,255:36,0 chr1 2334542 . C . PASS END=2334542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 2334543 . G . PASS END=2334563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 2336254 . C . PASS END=2336254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 2336300 . T . PASS END=2336300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 2336351 . C . PASS END=2336351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 2336367 . G . PASS END=2336367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 2336370 . G . PASS END=2336370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 2336381 . C . PASS END=2336381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 2336407 . G . PASS END=2336407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 2336423 . G . PASS END=2336423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 2336460 . G . PASS END=2336460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 2336473 . C . PASS END=2336473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 2336517 . C . PASS END=2336517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2336519 . G . PASS END=2336519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2336562 . G . PASS END=2336562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 2336578 . G . PASS END=2336578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 2336611 . G . PASS END=2336611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 2336706 . C . PASS END=2336706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 2336760 . C . PASS END=2336760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 2336785 . C . PASS END=2336785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 2336795 . C . PASS END=2336795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 2336804 . T . PASS END=2336804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2336895 . C . PASS END=2336895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 2336901 . G . PASS END=2336901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2337030 . A . PASS END=2337030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 2337114 . T . PASS END=2337114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 2337189 . C . PASS END=2337189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 2337195 . G . PASS END=2337195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 2337198 . C . PASS END=2337198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2337205 . T . PASS END=2337211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 2337212 . T . PASS END=2337248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr1 2337249 . T . PASS END=2337255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 2337256 . G . PASS END=2337257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2337258 . A . PASS END=2337268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 2337269 . T . PASS END=2337273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 2337275 . T . PASS END=2337276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2337922 . C . PASS END=2337952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,574:0,48,255:18,0 chr1 2337953 . C . PASS END=2337953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 2337954 . C . PASS END=2337957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 2337958 . A . PASS END=2337958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 2337959 . G . PASS END=2338005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,623:0,54,255:18,0 chr1 2338006 . G . PASS END=2338013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 2338014 . G . PASS END=2338031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,484:0,45,255:15,0 chr1 2338032 . G . PASS END=2338044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 2338045 . C . PASS END=2338049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 2338050 . A . PASS END=2338050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 2338051 . A . PASS END=2338058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 2338151 . G . PASS END=2338151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 2338154 . C . PASS END=2338154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 2338157 . A . PASS END=2338159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 2338160 . T . PASS END=2338160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 2338161 . G . PASS END=2338163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 2338164 . G . PASS END=2338179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr1 2338180 . T . PASS END=2338180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,602:0,24,255:15,0 chr1 2338181 . G . PASS END=2338181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 2338182 . C . PASS END=2338182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 2338183 . A . PASS END=2338183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2338184 . G . PASS END=2338184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 2338185 . C . PASS END=2338196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:15,0 chr1 2338197 . C . PASS END=2338197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 2338198 . C . PASS END=2338202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 2338203 . T . PASS END=2338207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2338208 . G . PASS END=2338216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 2338217 . T . PASS END=2338219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2338220 . A . PASS END=2338239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 2338240 . A . PASS END=2338244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 2338245 . C T, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.843;ReadPosRankSum=1.813;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,6,0:0.500,0.000:12:1,1,0:5,5,0:48:85,0,50,215,215,429:197,0,174:4,0:5.0000e+01,6.5233e-05,5.3000e+01,2.1456e+02,2.4935e+02,4.3210e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,4,2:3,3,1,5 chr1 2338246 . A . PASS END=2338249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 2338250 . C . PASS END=2338250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:6,0 chr1 2338251 . C . PASS END=2338258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 2338259 . G . PASS END=2338273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 2338274 . C . PASS END=2338274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 2338275 . C . PASS END=2338282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 2338283 . T . PASS END=2338284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2338285 . T . PASS END=2338288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 2338289 . T . LowGQ END=2338289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:15,0 chr1 2338290 . A . PASS END=2338295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 2338296 . G . PASS END=2338296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 2338297 . G . PASS END=2338317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:17,0 chr1 2338318 . A . PASS END=2338318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 2338319 . G . PASS END=2338328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 2338329 . A . PASS END=2338329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:17,0 chr1 2338330 . C . PASS END=2338343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 2338344 . A . PASS END=2338344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 2338345 . G . PASS END=2338355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,645:0,54,255:18,0 chr1 2338356 . A . PASS END=2338356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 2338357 . C . PASS END=2338363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2338364 . G . PASS END=2338364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 2338365 . G . PASS END=2338382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,588:0,48,255:16,0 chr1 2338383 . C . PASS END=2338383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2338384 . C . PASS END=2338394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 2338409 . C . PASS END=2338409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2339889 . A . PASS END=2339895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:12,0 chr1 2339896 . T . PASS END=2339896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 2339897 . G . PASS END=2339902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 2339903 . C . LowGQ END=2339903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:12,0 chr1 2339904 . G . PASS END=2339908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 2339909 . C . PASS END=2339961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr1 2339962 . G . PASS END=2339962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,551:0,2,255:17,0 chr1 2339963 . C . PASS END=2339964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 2339965 . G . PASS END=2339975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 2339976 . G . PASS END=2339976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,689:0,16,255:16,0 chr1 2339977 . C . PASS END=2339981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 2339982 . C . PASS END=2339985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 2339986 . G . PASS END=2339986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 2339987 . T . PASS END=2339988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 2339989 . T . PASS END=2339991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 2339992 . G . PASS END=2339997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:22,0 chr1 2339998 . A . PASS END=2339998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 2339999 . G . PASS END=2340025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr1 2340026 . C . PASS END=2340036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 2340037 . G . PASS END=2340037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2340038 . G . PASS END=2340101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,629:0,51,255:19,0 chr1 2340102 . C . PASS END=2340103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:11,0 chr1 2340104 . C . PASS END=2340152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:17,0 chr1 2340153 . A . PASS END=2340153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 2340154 . G . PASS END=2340157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 2340158 . G . PASS END=2340158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 2340159 . A . PASS END=2340162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,558:0,45,255:15,0 chr1 2340163 . G . PASS END=2340188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:18,0 chr1 2340189 . A . PASS END=2340190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:15,0 chr1 2340191 . G . PASS END=2340199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:16,0 chr1 2340200 . T C, 98.17 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,9,0:0,8,0:48:136,51,0,659,51,659:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,8:0,0,7,10 chr1 2340201 . G . PASS END=2340203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr1 2340204 . A . PASS END=2340204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 2340205 . C . PASS END=2340211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,615:0,51,255:17,0 chr1 2340212 . G . PASS END=2340212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:14,0 chr1 2340213 . C . PASS END=2340219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 2340220 . G . PASS END=2340220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 2340221 . C . PASS END=2340237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 2340238 . G . PASS END=2340247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 2340248 . T . PASS END=2340248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 2340249 . G . PASS END=2340267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr1 2340268 . T . PASS END=2340268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:15,0 chr1 2340269 . G . PASS END=2340277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 2340278 . C . PASS END=2340297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,435:0,36,255:13,0 chr1 2340302 . G . PASS END=2340302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 2341810 . C . PASS END=2341824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:25,0 chr1 2341825 . G . PASS END=2341876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1117:0,83,255:33,0 chr1 2341877 . C . PASS END=2341877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 2341878 . C . PASS END=2341884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr1 2341885 . T . PASS END=2341886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:30,0 chr1 2341887 . G . PASS END=2341891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 2342198 . T . PASS END=2342307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:31:0,86,1233:0,86,255:40,0 chr1 2343819 . C . PASS END=2343819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 2343830 . C . PASS END=2343841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 2343842 . G . PASS END=2343842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 2343843 . C . PASS END=2343844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 2343845 . G . PASS END=2343845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 2343846 . G . PASS END=2343846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 2343847 . G . PASS END=2343847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 2343848 . C . PASS END=2343858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 2343859 . G . PASS END=2343859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 2343860 . C . PASS END=2343860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 2343861 . G . PASS END=2343861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2343862 . C . PASS END=2343867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2343868 . A . PASS END=2343871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2343872 . C . PASS END=2343910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 2343911 . C . PASS END=2343919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 2343920 . G . PASS END=2343987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 2343988 . C . PASS END=2343993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 2343994 . G . PASS END=2344014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 2344015 . G . PASS END=2344015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 2344016 . C . PASS END=2344033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,394:0,33,255:11,0 chr1 2344034 . G . PASS END=2344056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 2359092 . A . PASS END=2359105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:26,0 chr1 2359106 . G . PASS END=2359121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr1 2359122 . G . PASS END=2359124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1039:0,71,255:27,0 chr1 2359125 . C . PASS END=2359131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 2359132 . A . PASS END=2359132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 2359133 . C . PASS END=2359136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1180:0,93,255:31,0 chr1 2359137 . T . PASS END=2359137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 2359138 . G . PASS END=2359155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1119:0,93,255:31,0 chr1 2359156 . A . PASS END=2359156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,970:0,60,255:26,0 chr1 2359157 . A . PASS END=2359157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2359158 . G . PASS END=2359158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 2359159 . G . PASS END=2359161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 2359162 . C . PASS END=2359165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:25,0 chr1 2359166 . G . PASS END=2359166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:20,0 chr1 2359167 . C . PASS END=2359184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,898:0,72,255:24,0 chr1 2361777 . G . PASS END=2361780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 2361781 . G . PASS END=2361799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:18,0 chr1 2361800 . G . PASS END=2361845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:25,0 chr1 2361846 . C . PASS END=2361850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 2361851 . G . PASS END=2361862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 2361863 . C . PASS END=2361864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2361865 . T . PASS END=2361869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 2361870 . C . PASS END=2361891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:30,0 chr1 2361892 . T . PASS END=2361892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 2361893 . G . PASS END=2361905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1086:0,90,255:30,0 chr1 2361906 . A . PASS END=2361906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 2361907 . G . PASS END=2361935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1202:0,83,255:31,0 chr1 2361936 . A . PASS END=2361982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,892:0,71,255:26,0 chr1 2361983 . T . PASS END=2362012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 2362013 . A . PASS END=2362013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 2362014 . G . PASS END=2362019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 2362020 . G T, 49.88 PASS DP=25;MQ=249.68;MQRankSum=4.215;ReadPosRankSum=2.475;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:5,7,0:8,5,0:48:85,0,50,400,465,865:255,0,255:10,0:4.9880e+01,6.6269e-05,5.3000e+01,4.0037e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,5,7:6,7,6,6 chr1 2362021 . A . PASS END=2362047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 2362048 . G . PASS END=2362057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr1 2362058 . T . PASS END=2362068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:18,0 chr1 2399059 . A . PASS END=2399076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,537:0,48,255:16,0 chr1 2399077 . C . PASS END=2399081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 2399082 . T . PASS END=2399082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,480:0,1,255:12,0 chr1 2399083 . G . PASS END=2399088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 2399089 . A . PASS END=2399089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 2399090 . G . PASS END=2399090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2399091 . C . PASS END=2399096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 2399097 . C . PASS END=2399097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 2399098 . C . PASS END=2399098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 2399099 . A . PASS END=2399101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2408028 . A . PASS END=2408034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:12,0 chr1 2408035 . G . PASS END=2408035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 2408036 . T . PASS END=2408038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 2408039 . A . PASS END=2408040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 2408041 . G . PASS END=2408044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,643:0,51,255:19,0 chr1 2408045 . C . PASS END=2408045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 2408046 . T . PASS END=2408046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 2408047 . C . PASS END=2408051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 2408052 . G . PASS END=2408052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 2408053 . A . PASS END=2408070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,776:0,63,255:26,0 chr1 2408071 . C . PASS END=2408071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 2408072 . G . PASS END=2408076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,953:0,65,255:26,0 chr1 2408077 . C . PASS END=2408078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 2408079 . T . PASS END=2408079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 2408080 . G . PASS END=2408100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:31,0 chr1 2408101 . G . PASS END=2408101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 2408102 . G . PASS END=2408126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 2408127 . T . PASS END=2408127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 2408128 . C . PASS END=2408132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 2408133 . T . PASS END=2408138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2408139 . C . PASS END=2408140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2408141 . C . PASS END=2408151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 2408960 . A . PASS END=2408969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,368:0,33,255:12,0 chr1 2408970 . T . PASS END=2408970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 2408971 . G . PASS END=2408993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 2408994 . G . PASS END=2409012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:19,0 chr1 2409013 . G . PASS END=2409082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,853:0,63,255:25,0 chr1 2409083 . T . PASS END=2409085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2409086 . C . PASS END=2409103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 2409104 . A . PASS END=2409104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 2409105 . G . PASS END=2409113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 2409114 . A . PASS END=2409133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,652:0,43,255:19,0 chr1 2409134 . A . PASS END=2409138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,513:0,31,255:13,0 chr1 2409139 . G . PASS END=2409141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2409142 . A . PASS END=2409143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2409915 . T . PASS END=2409921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 2409922 . G . PASS END=2409929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 2409930 . G . PASS END=2409943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:19,0 chr1 2409944 . G . PASS END=2409946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr1 2409947 . A . PASS END=2409947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 2409948 . T . PASS END=2409958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 2409959 . A . PASS END=2409959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 2409960 . A . PASS END=2409971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 2409972 . G . PASS END=2409972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:21,0 chr1 2409973 . C . PASS END=2409975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,821:0,66,255:23,0 chr1 2409976 . C . PASS END=2409976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 2409977 . A . PASS END=2409980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr1 2409981 . G . PASS END=2409981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 2409982 . C . PASS END=2409985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 2409986 . G . PASS END=2409986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 2409987 . T . PASS END=2410006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,923:0,64,255:26,0 chr1 2410007 . G . PASS END=2410007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 2410008 . A . PASS END=2410008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:25,0 chr1 2410009 . G . PASS END=2410011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 2410012 . C . PASS END=2410012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:27,0 chr1 2410013 . C . PASS END=2410017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2410018 . C . PASS END=2410018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:25,0 chr1 2410019 . T . PASS END=2410019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2410020 . G . PASS END=2410020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 2410021 . C . PASS END=2410022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2410023 . T . PASS END=2410049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,856:0,61,255:25,0 chr1 2410050 . A . PASS END=2410050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 2410051 . G . PASS END=2410057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 2410058 . A . PASS END=2410058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2410059 . A . LowGQ END=2410059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,568:6,0,255:14,0 chr1 2410060 . G . PASS END=2410061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,621:0,33,255:15,0 chr1 2411173 . T . PASS END=2411187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 2411188 . T . PASS END=2411188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 2411189 . C . PASS END=2411221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:15:0,41,521:0,41,255:19,0 chr1 2411222 . C . PASS END=2411255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,829:0,66,255:24,0 chr1 2411256 . A . PASS END=2411256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 2411257 . A . PASS END=2411268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:22,0 chr1 2411269 . G . PASS END=2411270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 2411271 . A . PASS END=2411273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2411274 . T . PASS END=2411274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 2411275 . A . PASS END=2411280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 2411281 . G . PASS END=2411281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 2411282 . C . PASS END=2411328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,903:0,62,255:28,0 chr1 2411329 . C . PASS END=2411329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 2411330 . G . PASS END=2411331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 2411332 . G . PASS END=2411353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1164:0,80,255:36,0 chr1 2411354 . C . PASS END=2411354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:31,0 chr1 2411355 . T . PASS END=2411391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:34,0 chr1 2411392 . C . PASS END=2411392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 2411393 . T . PASS END=2411413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:34,0 chr1 2411414 . C . PASS END=2411417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1158:0,85,255:30,0 chr1 2411622 . G . PASS END=2411718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1164:0,80,255:36,0 chr1 2411719 . C . PASS END=2411751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:26,0 chr1 2415887 . G . PASS END=2415893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 2415894 . A . PASS END=2415894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 2415895 . C . PASS END=2415919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,766:0,63,255:25,0 chr1 2415920 . G . PASS END=2415920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 2415921 . G . PASS END=2415921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 2415922 . T . PASS END=2415922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 2415923 . T . PASS END=2415930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 2415931 . G . PASS END=2415955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1150:0,84,255:33,0 chr1 2415956 . T . PASS END=2415956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:30,0 chr1 2415957 . C . PASS END=2415969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1168:0,83,255:31,0 chr1 2415970 . C . PASS END=2415970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 2415971 . C . PASS END=2415974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2415975 . A . PASS END=2415975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 2415976 . C . PASS END=2415977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2415978 . T . PASS END=2415978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:26,0 chr1 2415979 . G . PASS END=2415983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 2415984 . T . PASS END=2415984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 2415985 . G . PASS END=2415986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 2415987 . T . PASS END=2415987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 2415988 . G . PASS END=2416005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1155:0,80,255:29,0 chr1 2416006 . G . PASS END=2416006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 2416007 . G . PASS END=2416008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 2416009 . C . PASS END=2416028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:26,0 chr1 2416029 . T . PASS END=2416029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:21,0 chr1 2416030 . G . PASS END=2416045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,61,255:22,0 chr1 2416046 . G . PASS END=2416055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,47,255:19,0 chr1 2416056 . A . PASS END=2416056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:15,0 chr1 2416057 . G . PASS END=2416057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 2418346 . A . PASS END=2418360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1211:0,99,255:37,0 chr1 2418361 . C . PASS END=2418361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 2418362 . T . PASS END=2418424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,99,1384:0,101,255:40,0 chr1 2418425 . T . PASS END=2418427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:33,0 chr1 2418428 . T . PASS END=2418439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:34:0,90,1343:0,97,255:33,0 chr1 2418612 . G . PASS END=2418815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:29:0,83,1046:0,83,255:40,0 chr1 2419037 . T . PASS END=2419038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 2419039 . G . PASS END=2419042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 2419043 . G . PASS END=2419143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1006:0,81,255:37,0 chr1 2419144 . T . PASS END=2419145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 2419146 . C . PASS END=2419149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 2419150 . A . PASS END=2419157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,79,255:26,0 chr1 2420646 . G . PASS END=2420651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,876:0,65,255:26,0 chr1 2420652 . A . PASS END=2420654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:29,0 chr1 2420655 . G . PASS END=2420656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1037:0,71,255:29,0 chr1 2420657 . T . PASS END=2420666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:31,0 chr1 2420667 . C . PASS END=2420667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 2420668 . G . PASS END=2420810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:31:0,84,1164:0,90,255:40,0 chr1 2420811 . C . PASS END=2420817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 2421199 . G . PASS END=2421200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2421201 . G . PASS END=2421208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,988:0,84,255:30,0 chr1 2421209 . T . PASS END=2421209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 2421210 . C . PASS END=2421248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:30:0,88,1133:0,88,255:35,0 chr1 2421249 . G . PASS END=2421249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:34,0 chr1 2421250 . T . PASS END=2421274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1215:0,84,255:35,0 chr1 2421275 . T . PASS END=2421296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,873:0,65,255:26,0 chr1 2421297 . C . PASS END=2421305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr1 2421306 . T . PASS END=2421306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2422631 . G . PASS END=2422651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr1 2422652 . G . PASS END=2422652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2422653 . T . PASS END=2422667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1017:0,81,255:31,0 chr1 2422668 . A . PASS END=2422668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 2422669 . G . PASS END=2422733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1087:0,88,255:38,0 chr1 2422734 . C . PASS END=2422752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:26,0 chr1 2422753 . A . PASS END=2422758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:22:0,57,855:0,66,255:19,0 chr1 2422759 . A . PASS END=2422760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2422761 . A . PASS END=2422774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 2426295 . A . PASS END=2426368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1074:0,82,255:33,0 chr1 2426369 . A . PASS END=2426369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:26,0 chr1 2426370 . A . PASS END=2426375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:28,0 chr1 2426376 . T . PASS END=2426376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:28,0 chr1 2426377 . C . PASS END=2426385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 2426386 . A . PASS END=2426387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:23,0 chr1 2426927 . A . PASS END=2426927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 2426928 . A . PASS END=2426928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr1 2426929 . G . PASS END=2427009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1335:0,87,255:40,0 chr1 2428046 . G . PASS END=2428055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 2428056 . C . PASS END=2428056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 2428057 . A . PASS END=2428067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 2428068 . A . PASS END=2428068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 2428069 . T . PASS END=2428070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2428071 . A . PASS END=2428081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,415:0,42,255:17,0 chr1 2428082 . G . PASS END=2428083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 2428084 . C . PASS END=2428116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,646:0,54,255:19,0 chr1 2428117 . T . PASS END=2428117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 2428118 . G . PASS END=2428143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:18,0 chr1 2428267 . C . PASS END=2428267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2428268 . G . PASS END=2428268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2428269 . G . PASS END=2428269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 2428270 . C . PASS END=2428300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:24,0 chr1 2428301 . G . PASS END=2428321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,976:0,81,255:29,0 chr1 2428322 . G . PASS END=2428324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 2428325 . G . PASS END=2428417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1119:0,87,255:39,0 chr1 2428418 . G . PASS END=2428418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:30,0 chr1 2428419 . C . PASS END=2428424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 2428425 . T . PASS END=2428447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,73,255:26,0 chr1 2428448 . G . PASS END=2428448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 2428449 . G . PASS END=2428449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 2428941 . T . PASS END=2429048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:34:0,89,1235:0,89,255:40,0 chr1 2429962 . G . PASS END=2429970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 2429971 . A . PASS END=2429971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 2429972 . C . PASS END=2429973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 2429974 . C . PASS END=2429974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:22,0 chr1 2429975 . C . PASS END=2429976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 2429977 . A . PASS END=2429977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 2429978 . C . PASS END=2429980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 2429981 . G . PASS END=2429981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 2429982 . G . PASS END=2429986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 2429987 . C . PASS END=2429989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 2429990 . C . PASS END=2429990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 2429991 . C . PASS END=2429992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 2429993 . G . PASS END=2429993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 2429994 . C . PASS END=2429998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 2429999 . G . PASS END=2429999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 2430000 . C . PASS END=2430007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 2430008 . G . PASS END=2430009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,872:0,62,255:30,0 chr1 2430010 . A . PASS END=2430010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1105:0,96,255:32,0 chr1 2430011 . G . PASS END=2430011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1037:0,63,255:30,0 chr1 2430012 . C . PASS END=2430015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:32,0 chr1 2430016 . T . PASS END=2430016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:29,0 chr1 2430017 . G . PASS END=2430019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1055:0,63,255:30,0 chr1 2430020 . G . PASS END=2430023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 2430024 . C . PASS END=2430025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1023:0,60,255:29,0 chr1 2430026 . G . PASS END=2430040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1127:0,82,255:32,0 chr1 2430041 . G . PASS END=2430041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1017:0,49,255:30,0 chr1 2430042 . C . PASS END=2430052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 2430053 . G . PASS END=2430053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1017:0,41,255:26,0 chr1 2430054 . C . PASS END=2430055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:28,0 chr1 2430056 . G . PASS END=2430066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,1070:0,63,255:28,0 chr1 2430067 . T . PASS END=2430067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:23,0 chr1 2430068 . G . PASS END=2430073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 2430074 . G . PASS END=2430074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:24,0 chr1 2430075 . G . PASS END=2430075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 2430076 . A . PASS END=2430076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2430077 . C . PASS END=2430086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 2430183 . A . PASS END=2430193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1150:0,86,255:34,0 chr1 2430194 . C . PASS END=2430194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:33,0 chr1 2430195 . T . PASS END=2430217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1161:0,90,255:39,0 chr1 2430218 . G . PASS END=2430218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:37,0 chr1 2430219 . C . PASS END=2430351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:36:0,92,1294:0,92,255:40,0 chr1 2430352 . T . PASS END=2430352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1333:0,75,255:32,0 chr1 2430353 . G . PASS END=2430465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:33:0,85,1196:0,85,255:38,0 chr1 2430466 . A . PASS END=2430469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:24,0 chr1 2430470 . G . PASS END=2430482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1215:0,89,255:30,0 chr1 2430483 . C . PASS END=2430483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 2430484 . C . PASS END=2430491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 2430492 . T . PASS END=2430521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 2430522 . G . PASS END=2430522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 2430523 . G . PASS END=2430534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:25,0 chr1 2430535 . C . PASS END=2430545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 2430546 . A . PASS END=2430546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,904:0,73,255:27,0 chr1 2430547 . C . PASS END=2430556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 2430557 . C . PASS END=2430557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 2430558 . A . PASS END=2430563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 2430564 . C . PASS END=2430564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 2430565 . A . PASS END=2430572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:28,0 chr1 2430573 . G . PASS END=2430574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:27,0 chr1 2430575 . G . PASS END=2430575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2430576 . A . PASS END=2430576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:26,0 chr1 2430577 . T . PASS END=2430579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2430580 . C . PASS END=2430585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 2430586 . T . PASS END=2430607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 2430608 . C . PASS END=2430608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2430609 . G . PASS END=2430609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 2430610 . A . PASS END=2430616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:25,0 chr1 2430617 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=1.683;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:4,6,0:8,9,0:48:85,0,49,507,429,936:255,0,255:12,0:5.0000e+01,6.8598e-05,5.2363e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,8,7:5,7,5,10 chr1 2430618 . G . PASS END=2430627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr1 2430628 . T . PASS END=2430628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 2430629 . C . PASS END=2430645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 2430646 . T . PASS END=2430646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:22,0 chr1 2430647 . G . PASS END=2430654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 2430655 . G . PASS END=2430660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 2430661 . T . PASS END=2430661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 2430662 . G . PASS END=2430663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2430664 . T . PASS END=2430669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 2431080 . G . PASS END=2431085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1156:0,80,255:32,0 chr1 2431086 . G . PASS END=2431088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1153:0,61,255:33,1 chr1 2431089 . A . PASS END=2431114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1174:0,85,255:34,0 chr1 2431115 . G . PASS END=2431116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,85,255:26,0 chr1 2431117 . C . PASS END=2431118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 2431119 . C . PASS END=2431158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:26,0 chr1 2431159 . G . PASS END=2431159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 2433551 . G . PASS END=2433574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 2433575 . G . PASS END=2433575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 2433576 . G . PASS END=2433586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2433587 . C . PASS END=2433594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 2433595 . A . PASS END=2433597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2433598 . G . PASS END=2433608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 2433609 . T . PASS END=2433609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 2433610 . G . PASS END=2433612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2433613 . C . PASS END=2433614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 2433615 . G . PASS END=2433616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 2433617 . C . PASS END=2433626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:10:0,24,360:0,30,255:9,0 chr1 2433627 . G . PASS END=2433627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 2433628 . G . PASS END=2433656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 2433657 . A . PASS END=2433697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 2433698 . C . PASS END=2433698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 2433699 . A . PASS END=2433701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 2433702 . A . PASS END=2433712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 2433713 . A . PASS END=2433761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,419:0,36,255:13,0 chr1 2433762 . G . PASS END=2433765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 2433766 . G . PASS END=2433768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2433769 . A . PASS END=2433773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 2433774 . A . LowGQ END=2433774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:8,0 chr1 2433775 . T . PASS END=2433775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 2433776 . G . PASS END=2433781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:10,0 chr1 2433782 . C . PASS END=2433786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 2433787 . C . LowGQ END=2433788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,269:3,0,255:8,1 chr1 2433789 . G . PASS END=2433791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2433792 . C . PASS END=2433794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 2433795 . G . PASS END=2433795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 2433796 . A . PASS END=2433799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 2433800 . G . PASS END=2433800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 2433801 . C . PASS END=2433801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 2433802 . T . PASS END=2433802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 2433803 . C . PASS END=2433803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 2433804 . C . PASS END=2433804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 2433805 . G . PASS END=2433807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 2433808 . A . LowGQ END=2433809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:0,0,225:7,0 chr1 2433810 . C . PASS END=2433821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 2433822 . A . PASS END=2433822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 2433823 . G . PASS END=2433825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 2433826 . G . PASS END=2433862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 2433863 . G . PASS END=2433873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 2433874 . G . PASS END=2433886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,505:0,45,255:16,0 chr1 2433887 . C . PASS END=2433887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 2433888 . G . PASS END=2433899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:18,0 chr1 2433900 . C T, 48.05 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=1.992;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,7,0:0.389,0.000:18:7,5,0:4,2,0:47:83,0,50,250,393,644:195,0,255:11,0:4.8054e+01,8.9825e-05,5.3000e+01,2.5037e+02,4.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,5,2:9,2,3,4 chr1 2433901 . G . PASS END=2433935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,630:0,41,255:18,0 chr1 2433936 . C . PASS END=2433936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 2433937 . C . PASS END=2433937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2433938 . G . PASS END=2433940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 2433941 . A . PASS END=2433941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 2433942 . C . PASS END=2433944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:17,0 chr1 2433945 . G . PASS END=2433946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 2433947 . A . PASS END=2433950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,548:0,51,255:17,0 chr1 2433951 . A . PASS END=2433951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 2433952 . G . PASS END=2433952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 2433953 . T . PASS END=2433953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr1 2433954 . G . PASS END=2433956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 2433957 . T . PASS END=2433957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 2433958 . G . PASS END=2433967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 2433968 . T . PASS END=2433968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:15,0 chr1 2433969 . G . PASS END=2433969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:14,0 chr1 2433970 . C . PASS END=2433970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,615:0,29,255:15,0 chr1 2433971 . G . PASS END=2434008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,570:0,41,255:19,0 chr1 2434009 . A . PASS END=2434009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 2434010 . C . PASS END=2434010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 2434011 . C . PASS END=2434011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:13,0 chr1 2434012 . C . PASS END=2434012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:13,0 chr1 2434013 . A . PASS END=2434019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:15,0 chr1 2434020 . G . PASS END=2434020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 2434021 . G . PASS END=2434109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,552:0,48,255:19,0 chr1 2434110 . C . PASS END=2434146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,443:0,36,255:13,0 chr1 2434147 . T . PASS END=2434157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 2434158 . G . PASS END=2434158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2434159 . G . PASS END=2434162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 2434163 . G . PASS END=2434165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2434166 . C . PASS END=2434168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2434169 . G . PASS END=2434180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 2434181 . T . PASS END=2434184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2434185 . T . PASS END=2434231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 2434232 . T . PASS END=2434232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 2434233 . C . PASS END=2434242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:13,0 chr1 2434243 . G . PASS END=2434321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,599:0,45,255:19,0 chr1 2434322 . A . PASS END=2434322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 2434323 . G . PASS END=2434349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,652:0,51,255:18,0 chr1 2435056 . T . PASS END=2435066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,587:0,40,255:19,0 chr1 2435361 . A . PASS END=2435366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 2435367 . G . LowGQ END=2435367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,157:21,0,178:6,0 chr1 2435368 . C . PASS END=2435372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 2435373 . T . LowGQ END=2435373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,155:9,0,164:6,0 chr1 2435374 . C . PASS END=2435374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 2435375 . T . LowGQ END=2435375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,194:6,0,200:7,0 chr1 2435376 . C . PASS END=2435379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 2435380 . G . PASS END=2435380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 2435381 . C . PASS END=2435381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 2435382 . A . LowGQ END=2435382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,194:6,0,200:7,0 chr1 2435383 . G . PASS END=2435384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 2435385 . G . PASS END=2435385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 2435386 . G . PASS END=2435388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 2435389 . A . PASS END=2435389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 2435390 . C . PASS END=2435390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 2435391 . T . PASS END=2435391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 2435392 . C . PASS END=2435397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:18,0 chr1 2435398 . A . PASS END=2435398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 2435399 . C . PASS END=2435405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 2435406 . G . PASS END=2435406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,584:0,18,255:18,0 chr1 2435407 . C . PASS END=2435411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr1 2435412 . A . PASS END=2435412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,604:0,2,255:17,0 chr1 2435413 . A . PASS END=2435416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 2435417 . A . PASS END=2435418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 2435419 . C . PASS END=2435419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 2435420 . G . PASS END=2435420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 2435421 . C . PASS END=2435421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 2435422 . T . PASS END=2435422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 2435423 . G . PASS END=2435428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 2435429 . C . PASS END=2435429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 2435430 . C . PASS END=2435431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2435432 . G . PASS END=2435432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 2435433 . C . PASS END=2435436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2435437 . A . PASS END=2435438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 2435439 . G . PASS END=2435442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 2435443 . T . PASS END=2435443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 2435444 . G . PASS END=2435444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 2435445 . G . PASS END=2435445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 2435446 . T . PASS END=2435449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2435450 . C . PASS END=2435450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 2435451 . C . PASS END=2435456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 2435457 . C . PASS END=2435457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 2435458 . A . PASS END=2435471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 2435472 . C . PASS END=2435487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:19,0 chr1 2435488 . A . PASS END=2435488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 2435489 . C . PASS END=2435507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,631:0,40,255:19,0 chr1 2435508 . G . PASS END=2435508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 2435509 . A . PASS END=2435514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:18,0 chr1 2435515 . A . PASS END=2435515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:15,0 chr1 2435516 . G . PASS END=2435516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 2435517 . C . PASS END=2435517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr1 2435518 . C . PASS END=2435519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 2435520 . A . PASS END=2435520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 2435521 . T . PASS END=2435521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 2435522 . G . PASS END=2435525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 2435526 . C . PASS END=2435526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 2435527 . A . PASS END=2435527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,545:0,20,255:15,0 chr1 2435528 . A . PASS END=2435528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 2435529 . G . PASS END=2435530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 2435531 . C . PASS END=2435531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 2435532 . C . PASS END=2435532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 2435533 . C . PASS END=2435535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:33:18:0,33,495:0,37,255:11,0 chr1 2435536 . A . PASS END=2435540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:16:0,27,405:0,31,255:9,0 chr1 2435541 . A . PASS END=2435543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 2435544 . C . PASS END=2435560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 2435561 . A . PASS END=2435579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:12,0 chr1 2435580 . A . PASS END=2435580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 2435581 . C . PASS END=2435610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,407:0,36,255:13,0 chr1 2435611 . G . PASS END=2435632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 2435633 . G . PASS END=2435667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,365:0,30,255:13,0 chr1 2435668 . C . PASS END=2435679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 2435680 . G . PASS END=2435680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 2435681 . G . PASS END=2435685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 2435686 . G . PASS END=2435687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 2435688 . G . PASS END=2435727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,250:8,0 chr1 2435728 . G . PASS END=2435730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 2435731 . C . PASS END=2435731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 2435732 . C . PASS END=2435743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 2435744 . T . PASS END=2435744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 2435745 . T . PASS END=2435760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,421:0,33,255:13,0 chr1 2435761 . G . PASS END=2435761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 2435762 . T . PASS END=2435763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 2435764 . C . PASS END=2435769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 2435770 . T . PASS END=2435770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2435771 . G . PASS END=2435776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2435777 . G . PASS END=2435801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,382:0,36,255:12,0 chr1 2435802 . T . PASS END=2435808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 2435809 . A . PASS END=2435809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 2435810 . T . PASS END=2435811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 2435812 . T . PASS END=2435812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:13,0 chr1 2435813 . G . PASS END=2435813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 2435814 . G . PASS END=2435814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 2435815 . C . PASS END=2435828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,484:0,42,255:15,0 chr1 2435829 . T . PASS END=2435830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2435831 . T . PASS END=2435831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:13,0 chr1 2435832 . C . PASS END=2435832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2435833 . C . PASS END=2435833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:13,0 chr1 2435834 . T . PASS END=2435839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 2435840 . T . PASS END=2435840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr1 2435841 . C . PASS END=2435845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2435846 . A . PASS END=2435846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 2435847 . T . PASS END=2435850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2435851 . A . PASS END=2435852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr1 2435853 . C . PASS END=2435854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2435855 . A . PASS END=2435855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 2435856 . G . PASS END=2435858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 2435859 . A . PASS END=2435859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:15,0 chr1 2435860 . C . PASS END=2435860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 2435861 . A . PASS END=2435861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,527:0,21,255:15,0 chr1 2435862 . C . PASS END=2435873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 2435874 . T . PASS END=2435877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 2435878 . C . PASS END=2435878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 2435879 . C . PASS END=2435879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 2435880 . T . PASS END=2435880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:11,0 chr1 2435881 . G . PASS END=2435887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 2435888 . C . PASS END=2435888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 2435889 . T . PASS END=2435891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2435892 . G . PASS END=2435892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 2435893 . C . PASS END=2435893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2435894 . C . PASS END=2435894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr1 2435895 . T . PASS END=2435895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 2435896 . G . PASS END=2435907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 2435908 . T . PASS END=2435908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 2435909 . G . PASS END=2435909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 2435910 . A . PASS END=2435910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 2435911 . G . PASS END=2435920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 2435921 . G . PASS END=2435922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 2435923 . A . PASS END=2435923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 2435924 . G . PASS END=2435965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,559:0,40,255:18,0 chr1 2435966 . G . PASS END=2435966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 2435967 . C . PASS END=2435968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2435969 . G . PASS END=2435970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 2435971 . C . PASS END=2435971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 2435972 . C . PASS END=2435972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 2435973 . G . PASS END=2435973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2435974 . C . PASS END=2435980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2435981 . C . PASS END=2435982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 2435983 . G . PASS END=2435991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2435992 . G . PASS END=2436025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:16,0 chr1 2436026 . A . PASS END=2436026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2436027 . C . PASS END=2436065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 2436066 . G . PASS END=2436068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 2436069 . C . PASS END=2436070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 2436071 . C . PASS END=2436072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 2436073 . G . PASS END=2436090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 2436091 . C . PASS END=2436091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 2436092 . C . PASS END=2436134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:19,0 chr1 2436135 . T . PASS END=2436235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,815:0,66,255:26,0 chr1 2436236 . A . PASS END=2436236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 2436237 . G . PASS END=2436249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 2436250 . G . PASS END=2436250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 2436251 . G . PASS END=2436281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 2436282 . T . PASS END=2436284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 2436285 . G . PASS END=2436288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 2436289 . G . PASS END=2436289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 2436290 . G . PASS END=2436291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 2436292 . C . PASS END=2436335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,617:0,53,255:19,0 chr1 2436336 . C . PASS END=2436337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 2436338 . G . PASS END=2436360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 2436361 . C . PASS END=2436363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:17:0,39,585:0,51,255:13,0 chr1 2436364 . G . PASS END=2436367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 2436368 . C . PASS END=2436368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:13,0 chr1 2436369 . C . PASS END=2436379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2436380 . G . PASS END=2436398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 2436399 . G . PASS END=2436399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 2436400 . T . PASS END=2436404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 2436405 . T . PASS END=2436405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 2436406 . G . PASS END=2436410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2436411 . G . PASS END=2436418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 2436419 . T . PASS END=2436419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 2436420 . C . PASS END=2436433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 2436434 . C . PASS END=2436436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 2436437 . G . PASS END=2436439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2436440 . C . PASS END=2436440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 2436441 . G . PASS END=2436443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 2436444 . C . PASS END=2436444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 2436445 . C . PASS END=2436455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 2436456 . G . PASS END=2436456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr1 2436457 . G . PASS END=2436457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2436458 . G . PASS END=2436463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2436464 . C . PASS END=2436490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 2436491 . C . PASS END=2436491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:10,0 chr1 2436492 . A . PASS END=2436494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 2436495 . G . PASS END=2436500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2436501 . G . PASS END=2436522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 2436523 . G . PASS END=2436534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 2436535 . C . PASS END=2436535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 2436536 . C . PASS END=2436536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 2436537 . C . PASS END=2436537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 2436538 . C . PASS END=2436555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 2436556 . G . PASS END=2436556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 2436557 . G . PASS END=2436573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:12,0 chr1 2436574 . G . PASS END=2436574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 2436575 . G . PASS END=2436578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 2436579 . C . PASS END=2436586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 2436587 . C . PASS END=2436612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:35:12:0,35,435:0,35,255:12,0 chr1 2436613 . A . PASS END=2436613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 2436614 . T . PASS END=2436632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 2436633 . T . PASS END=2436633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 2436634 . G . PASS END=2436638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 2436639 . T . PASS END=2436639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 2436640 . G . PASS END=2436641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 2436642 . T . PASS END=2436652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:8,0 chr1 2440286 . T . PASS END=2440306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,466:0,39,255:13,0 chr1 2440307 . C . PASS END=2440360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr1 2440361 . C . PASS END=2440362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 2440363 . T . PASS END=2440363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2440364 . G . PASS END=2440384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:24,0 chr1 2440385 . C . PASS END=2440386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 2440387 . C . PASS END=2440390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 2440391 . G . PASS END=2440408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1133:0,90,255:32,0 chr1 2440409 . G . PASS END=2440409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 2440410 . T . PASS END=2440413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:89:30:0,89,886:0,89,255:31,0 chr1 2440414 . T . PASS END=2440414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 2440415 . G . PASS END=2440487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1157:0,93,255:37,0 chr1 2440488 . T . PASS END=2440488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 2440489 . T . PASS END=2440489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 2440490 . A . PASS END=2440490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 2440491 . T . PASS END=2440499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:30,0 chr1 2441301 . C . PASS END=2441369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,113,1545:0,113,255:40,0 chr1 2441496 . T . PASS END=2441569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:37:0,83,1337:0,83,255:40,0 chr1 2441570 . G . PASS END=2441570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 2441571 . G . PASS END=2441596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:33,0 chr1 2442117 . C . PASS END=2442221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:45:0,92,1508:0,92,255:40,0 chr1 2442777 . C . PASS END=2442826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1264:0,94,255:39,0 chr1 2443067 . C . PASS END=2443122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1457:0,113,255:40,0 chr1 2444327 . G . PASS END=2444349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr1 2444350 . G . PASS END=2444376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,784:0,66,255:23,0 chr1 2444377 . T . PASS END=2444384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 2444385 . G . PASS END=2444385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 2444386 . C . PASS END=2444413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,886:0,69,255:24,0 chr1 2444414 . G A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=2.108;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:2,7,0:9,7,0:48:85,0,49,501,393,894:255,0,255:9,0:5.0000e+01,6.9634e-05,5.2214e+01,4.5000e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,8,6:4,7,5,9 chr1 2444415 . C . PASS END=2444451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 2444452 . C . PASS END=2444461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 2444462 . T . PASS END=2444472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 2444473 . C . PASS END=2444473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr1 2444474 . T . PASS END=2444478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 2445441 . T . PASS END=2445443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2445444 . G . PASS END=2445447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 2445448 . T . PASS END=2445448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 2445449 . A . PASS END=2445449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 2445450 . G . PASS END=2445450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 2445451 . G . PASS END=2445454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 2445455 . C . PASS END=2445455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 2445456 . C . PASS END=2445477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:31,0 chr1 2445478 . C . PASS END=2445481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 2445482 . G . PASS END=2445482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:25,0 chr1 2445483 . C . PASS END=2445490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 2445491 . T . PASS END=2445491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2445492 . G . PASS END=2445495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2445496 . A . PASS END=2445501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 2445502 . C . PASS END=2445507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2445508 . A . PASS END=2445528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 2445793 . A . PASS END=2445793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 2445794 . A . PASS END=2445797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 2445798 . C . PASS END=2445798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:21,0 chr1 2445799 . T . PASS END=2445804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:25,0 chr1 2445805 . C . PASS END=2445805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 2445806 . T . PASS END=2445809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 2445810 . G . PASS END=2445810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 2445811 . G . PASS END=2445811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 2445812 . T . PASS END=2445819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 2445820 . T . PASS END=2445825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 2445826 . C . PASS END=2445826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:25,0 chr1 2445827 . A . PASS END=2445830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2445831 . C . PASS END=2445835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 2445836 . G . PASS END=2445836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 2445837 . C . PASS END=2445841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 2445842 . A . PASS END=2445842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2445843 . C . PASS END=2445848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2445849 . C . PASS END=2445863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,955:0,78,255:26,0 chr1 2445864 . A . PASS END=2445867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 2445868 . A . PASS END=2445893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,947:0,64,255:26,0 chr1 2445894 . G . PASS END=2445895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,910:0,48,255:20,0 chr1 2445896 . G . PASS END=2445897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 2445898 . T . PASS END=2445898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:19,0 chr1 2445899 . T . PASS END=2445902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:20,0 chr1 2445903 . T . PASS END=2445903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:19,0 chr1 2445904 . A . PASS END=2445904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 2445905 . C . PASS END=2445905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2446760 . T . PASS END=2446771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1025:0,80,255:29,0 chr1 2446772 . A . PASS END=2446774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 2446775 . A . PASS END=2446781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr1 2446782 . T . PASS END=2446782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,984:0,21,255:25,0 chr1 2446783 . G . PASS END=2446789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:29,0 chr1 2446790 . A . PASS END=2446796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1078:0,74,255:26,0 chr1 2446797 . A . PASS END=2446797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:22,0 chr1 2446798 . C . PASS END=2446799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:24,0 chr1 2446800 . T . PASS END=2446800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:22,0 chr1 2446801 . C . PASS END=2446818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:25,0 chr1 2446819 . T . PASS END=2446821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 2446822 . C . PASS END=2446823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 2446824 . A . PASS END=2446824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 2446825 . G . PASS END=2446825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 2446826 . G . PASS END=2446827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 2446828 . G . PASS END=2446840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,978:0,65,255:26,0 chr1 2447001 . C . PASS END=2447004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 2447005 . T . PASS END=2447005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,604:0,10,255:15,0 chr1 2447006 . C . PASS END=2447009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 2447010 . G . PASS END=2447020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 2447021 . A . PASS END=2447021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,666:0,46,255:20,0 chr1 2447022 . G . PASS END=2447037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr1 2447038 . T . PASS END=2447038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 2447039 . T . PASS END=2447051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 2447052 . G . PASS END=2447052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 2447053 . T . PASS END=2447071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 2447072 . T . PASS END=2447072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 2447073 . G . PASS END=2447079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 2447080 . A . PASS END=2447088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,814:0,53,255:20,0 chr1 2447089 . G . PASS END=2447090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 2447091 . C . PASS END=2447114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 2447115 . A . PASS END=2447120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 2447121 . T . PASS END=2447125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 2447126 . T . PASS END=2447126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:13,0 chr1 2447127 . C . PASS END=2447132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2447133 . C . PASS END=2447156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 2449321 . T . PASS END=2449332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 2449603 . A . PASS END=2449627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 2449628 . G . PASS END=2449628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 2449629 . G . PASS END=2449676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,878:0,69,255:25,0 chr1 2449677 . T . PASS END=2449677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,707:0,39,255:22,0 chr1 2449678 . C . PASS END=2449684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,811:0,72,255:24,0 chr1 2449685 . C . PASS END=2449685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:20,0 chr1 2449686 . A . PASS END=2449692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 2449693 . C . PASS END=2449703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 2449955 . T . PASS END=2450036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:36:0,88,1452:0,88,255:40,0 chr1 2450582 . C . PASS END=2450602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,727:0,60,255:23,0 chr1 2450603 . A . PASS END=2450603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 2450604 . T . PASS END=2450614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,869:0,62,255:26,0 chr1 2450615 . G . PASS END=2450615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 2450616 . C . PASS END=2450616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 2450617 . G . PASS END=2450617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 2450618 . C . PASS END=2450619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 2450620 . T . PASS END=2450620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr1 2450621 . G . PASS END=2450622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1063:0,84,255:30,0 chr1 2450623 . T . PASS END=2450623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 2450624 . C . PASS END=2450624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 2450625 . A . PASS END=2450625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 2450626 . C . PASS END=2450633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 2450634 . C . PASS END=2450634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 2450635 . C . PASS END=2450639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1180:0,90,255:31,0 chr1 2450640 . A . PASS END=2450640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 2450641 . T . PASS END=2450641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 2450642 . A . PASS END=2450642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 2450643 . A . PASS END=2450645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 2450646 . A . PASS END=2450646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1060:0,77,255:26,0 chr1 2450647 . A . PASS END=2450647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2450648 . G . PASS END=2450648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 2450649 . C . PASS END=2450650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2450651 . T . PASS END=2450654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1131:0,77,255:26,0 chr1 2450655 . A . PASS END=2450687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:32,0 chr1 2450688 . T . PASS END=2450717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 2450718 . C . PASS END=2450718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 2450719 . T . PASS END=2450734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 2450735 . G . PASS END=2450735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 2450736 . C . PASS END=2450740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 2450741 . C . PASS END=2450741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 2450742 . G . PASS END=2450745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 2450746 . T . PASS END=2450746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 2450747 . G . PASS END=2450747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 2450748 . T . PASS END=2450755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,705:0,49,255:19,0 chr1 2450756 . G . PASS END=2450756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:15,0 chr1 2450757 . G . PASS END=2450763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:16,0 chr1 2451240 . C . PASS END=2451259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:24,0 chr1 2451260 . T . PASS END=2451260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:23,0 chr1 2451261 . T . PASS END=2451300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 2451301 . A . PASS END=2451324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 2451325 . G . PASS END=2451330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 2451331 . C . PASS END=2451362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,43,255:19,0 chr1 2451363 . T . PASS END=2451367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2451368 . G . PASS END=2451370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 2451371 . A . PASS END=2451371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 2451372 . G . PASS END=2451380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,545:0,48,255:16,0 chr1 2451381 . G . PASS END=2451381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 2451382 . C . PASS END=2451384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2451385 . G . PASS END=2451387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 2451388 . A . PASS END=2451388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 2451389 . A . PASS END=2451389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr1 2451390 . A . PASS END=2451393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 2451761 . C . PASS END=2451766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 2451767 . T . PASS END=2451767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2451768 . T . PASS END=2451826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,752:0,63,255:25,0 chr1 2451827 . C . PASS END=2451827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 2451828 . C . PASS END=2451835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,886:0,61,255:24,0 chr1 2451836 . C . PASS END=2451836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 2451837 . C . PASS END=2451837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 2451838 . T . PASS END=2451842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 2451843 . T . PASS END=2451846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 2451847 . T . PASS END=2451847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 2451848 . C . PASS END=2451853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2452162 . C . PASS END=2452345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:32:0,91,1127:0,91,255:40,0 chr1 2452540 . T . PASS END=2452568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:36:0,97,1343:0,97,255:38,0 chr1 2452569 . T C, 49.56 PASS DP=39;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=2.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,18,0:0.462,0.000:39:11,12,0:10,6,0:48:84,0,50,644,705,1349:255,0,255:18,0:4.9558e+01,6.9893e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,4,9,9:7,14,13,5 chr1 2452570 . T . PASS END=2452606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,104,1433:0,104,255:40,0 chr1 2452607 . C . PASS END=2452754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:38:0,84,1382:0,84,255:40,0 chr1 2453049 . C . PASS END=2453089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1140:0,85,255:40,0 chr1 2453090 . C . PASS END=2453090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:39,0 chr1 2453091 . A . PASS END=2453253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:30:0,80,1163:0,80,255:40,0 chr1 2453254 . C . PASS END=2453254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:29,0 chr1 2453255 . A . PASS END=2453256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 2453257 . A . PASS END=2453257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,861:0,73,255:29,0 chr1 2453258 . C . PASS END=2453259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 2453260 . G . PASS END=2453260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 2453261 . G . PASS END=2453268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 2453269 . T . PASS END=2453271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 2453272 . G . PASS END=2453275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 2453276 . C . PASS END=2453276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 2453277 . A . PASS END=2453279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2453280 . A . PASS END=2453293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,909:0,64,255:24,0 chr1 2453294 . G . PASS END=2453294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:20,0 chr1 2453295 . G . PASS END=2453301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 2453302 . A . PASS END=2453303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 2453304 . G . PASS END=2453304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 2453305 . C . PASS END=2453305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 2453306 . C . PASS END=2453308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2453309 . A . PASS END=2453312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:23:0,51,765:0,55,255:19,0 chr1 2453313 . T . PASS END=2453313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,646:0,36,255:16,0 chr1 2453314 . C . PASS END=2453315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 2453316 . C . PASS END=2453316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:17,0 chr1 2453317 . T . PASS END=2453326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:19,0 chr1 2453327 . G . PASS END=2453329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 2453330 . G . PASS END=2453331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2453332 . C . PASS END=2453332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2453333 . T . PASS END=2453333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 2453334 . A . PASS END=2453334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2453335 . A . PASS END=2453351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,47,255:19,0 chr1 2453352 . G . PASS END=2453367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,459:0,39,255:13,0 chr1 2453368 . G . PASS END=2453368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 2453369 . A . PASS END=2453380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 2457903 . C . LowGQ END=2457921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr1 2457922 . C . PASS END=2457929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 2457930 . T . PASS END=2457946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 2457947 . A . PASS END=2457974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:13,0 chr1 2457975 . T . PASS END=2457984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 2457985 . G . PASS END=2457985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 2457986 . T . PASS END=2458019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 2458020 . C . PASS END=2458020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 2458021 . C . PASS END=2458050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 2460908 . T . LowGQ END=2461002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,33:3,0 chr1 2461003 . G . PASS END=2461011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 2461012 . G . PASS END=2461037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 2461038 . G . PASS END=2461054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:12,0 chr1 2461055 . G . PASS END=2461060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 2461061 . C . PASS END=2461061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 2461062 . A . PASS END=2461102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,615:0,51,255:19,0 chr1 2461103 . G . PASS END=2461104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2461105 . A . PASS END=2461149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,44,255:19,0 chr1 2461150 . C . PASS END=2461159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 2461160 . G . PASS END=2461189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,26,255:9,0 chr1 2461190 . T . PASS END=2461204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:8:0,12,180:0,24,255:6,0 chr1 2461205 . C . PASS END=2461205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 2461206 . G . PASS END=2461212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 2461213 . A . PASS END=2461235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr1 2461236 . G . PASS END=2461253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 2461254 . C . PASS END=2461254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 2461255 . T . PASS END=2461281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 2461282 . C . PASS END=2461309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 2461310 . A . PASS END=2461310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 2461311 . G . PASS END=2461344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 2461345 . A . PASS END=2461345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 2461346 . G . PASS END=2461347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 2461348 . T . PASS END=2461349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 2461350 . G . PASS END=2461397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,341:0,30,255:13,0 chr1 2461398 . A . PASS END=2461400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 2461401 . C . PASS END=2461448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:12,0 chr1 2461449 . A . PASS END=2461449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 2461450 . G . PASS END=2461450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 2461550 . T . PASS END=2461550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 2461551 . C . PASS END=2461551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 2461552 . G . PASS END=2461552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 2461553 . G . PASS END=2461553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 2461554 . T . PASS END=2461555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 2461556 . T . PASS END=2461556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 2461557 . T . PASS END=2461567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:16,0 chr1 2461568 . G . PASS END=2461568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 2461569 . C . PASS END=2461572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2461573 . G . PASS END=2461587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:13:0,31,482:0,31,255:13,0 chr1 2461588 . C . PASS END=2461589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 2461590 . G . PASS END=2461596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 2461597 . G . PASS END=2461603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 2488104 . A . PASS END=2488110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2488111 . C . PASS END=2488111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 2488112 . T . PASS END=2488112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 2488113 . C . PASS END=2488115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 2488116 . G . PASS END=2488131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:30,0 chr1 2488132 . C . PASS END=2488141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:26,0 chr1 2488142 . A . PASS END=2488143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 2488144 . C . PASS END=2488148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 2488149 . C . PASS END=2488152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2488153 . A G, 49.93 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=3.513;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:7,7,0:8,7,0:48:85,0,50,501,536,1037:255,0,255:14,0:4.9928e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,5,9:8,7,10,4 chr1 2488154 . A . PASS END=2488158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:27,0 chr1 2488159 . A . PASS END=2488172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr1 2489165 . G . LowGQ END=2489273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:3,0 chr1 2489782 . G . PASS END=2489784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 2489785 . A . PASS END=2489785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 2489786 . T . PASS END=2489792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 2489793 . A . PASS END=2489804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 2489805 . G . PASS END=2489805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 2489806 . G . PASS END=2489810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2489811 . C . PASS END=2489811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 2489812 . T . PASS END=2489853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,886:0,69,255:26,0 chr1 2489854 . T . PASS END=2489854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 2489855 . T . PASS END=2489858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 2489859 . C . PASS END=2489866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2489867 . T . PASS END=2489870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 2489871 . C . PASS END=2489877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,729:0,47,255:19,0 chr1 2489878 . A . PASS END=2489883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 2489884 . T . PASS END=2489884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr1 2489885 . G . PASS END=2489887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2489888 . G . PASS END=2489907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 2490608 . A . PASS END=2490608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2490609 . T . PASS END=2490610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 2490611 . A . PASS END=2490612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2490613 . C . PASS END=2490614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 2490615 . G . PASS END=2490618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 2490619 . A . PASS END=2490619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 2490620 . G . PASS END=2490622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 2490623 . A . PASS END=2490623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 2490624 . G . PASS END=2490625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr1 2490626 . T . PASS END=2490627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 2490628 . G . PASS END=2490628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 2490629 . A . PASS END=2490630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 2490631 . T . PASS END=2490632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:23,0 chr1 2490633 . C . PASS END=2490633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 2490634 . T . PASS END=2490634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 2490635 . T . PASS END=2490635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 2490636 . T . PASS END=2490636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:22,0 chr1 2490637 . G . PASS END=2490637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 2490638 . G . PASS END=2490638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 2490639 . G . PASS END=2490646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,845:0,69,255:26,0 chr1 2490647 . G . PASS END=2490650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 2490651 . G . PASS END=2490652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 2490653 . A . PASS END=2490658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,922:0,84,255:28,0 chr1 2490659 . G . PASS END=2490659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 2490660 . G . PASS END=2490665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 2490666 . G . PASS END=2490700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,894:0,62,255:26,0 chr1 2490701 . C . PASS END=2490701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,877:0,54,255:22,0 chr1 2490702 . C . PASS END=2490719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,969:0,65,255:25,0 chr1 2490720 . G . PASS END=2490720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 2490721 . C . PASS END=2490721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 2490722 . A . PASS END=2490722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:21,0 chr1 2490723 . C . PASS END=2490724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 2490725 . T . PASS END=2490735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,50,255:19,0 chr1 2490736 . G . PASS END=2490736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:16,0 chr1 2490737 . C . PASS END=2490740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,720:0,47,255:17,0 chr1 2490741 . G . PASS END=2490741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:17,0 chr1 2490742 . G . PASS END=2490755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,765:0,50,255:19,0 chr1 2490756 . G . PASS END=2490760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2490761 . C . PASS END=2490762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2490763 . G . PASS END=2490764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2490765 . T . PASS END=2490816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 2490817 . G . PASS END=2490820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2490821 . C . PASS END=2490831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr1 2490832 . G . PASS END=2490833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 2490834 . G . PASS END=2490835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:14,0 chr1 2490836 . T . PASS END=2490836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:13,0 chr1 2490837 . C . PASS END=2490860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,605:0,51,255:18,0 chr1 2490861 . G . PASS END=2490897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,560:0,40,255:19,0 chr1 2490898 . C A, 49.60 PASS DP=18;MQ=246.70;MQRankSum=2.710;ReadPosRankSum=0.400;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,8,0:0.444,0.000:18:9,3,0:1,5,0:48:84,0,50,278,329,607:226,0,255:8,0:4.9604e+01,6.9375e-05,5.3000e+01,2.7773e+02,3.6360e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,5,3:4,6,4,4 chr1 2490899 . G . PASS END=2490899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 2490900 . G . PASS END=2490907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,540:0,32,255:13,0 chr1 2490908 . G . PASS END=2490912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 2490913 . G . PASS END=2490927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,540:0,32,255:13,0 chr1 2490928 . C . PASS END=2490928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:12,0 chr1 2490929 . G . PASS END=2490931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2490932 . G . PASS END=2490941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 2490942 . C A, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.204;ReadPosRankSum=1.792;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:5,4,0:2,3,0:48:85,0,50,250,242,493:229,0,221:7,0:5.0000e+01,6.5233e-05,5.3000e+01,2.5031e+02,2.7712e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,5,2:4,3,6,1 chr1 2490943 . G . PASS END=2490943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 2490944 . G . PASS END=2490958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 2490959 . A . PASS END=2490959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:12,0 chr1 2490960 . C . PASS END=2490960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2490961 . T . PASS END=2490964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 2490965 . A . PASS END=2490971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2490972 . G . PASS END=2490972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 2490973 . C . PASS END=2490979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 2490980 . T . PASS END=2490988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 2490989 . T . PASS END=2490989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 2490990 . C . PASS END=2490991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 2490992 . G . PASS END=2490992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 2490993 . G . PASS END=2491016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 2491017 . A . PASS END=2491021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 2491022 . A . PASS END=2491026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 2491027 . T . PASS END=2491049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,544:0,48,255:16,0 chr1 2491050 . T . PASS END=2491050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 2491051 . C . PASS END=2491119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,592:0,41,255:19,0 chr1 2491120 . T . PASS END=2491124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 2491125 . A . PASS END=2491135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,654:0,46,255:19,0 chr1 2491136 . C . PASS END=2491136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2491137 . T . PASS END=2491145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 2491146 . G . PASS END=2491167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:23,0 chr1 2491168 . T . PASS END=2491175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,56,255:19,0 chr1 2491176 . G . PASS END=2491179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:23,0 chr1 2491180 . T . PASS END=2491180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,792:0,31,255:22,0 chr1 2491181 . T . PASS END=2491184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr1 2491185 . C . PASS END=2491185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 2491186 . T . PASS END=2491192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:24,0 chr1 2491193 . G . PASS END=2491193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 2491194 . C . PASS END=2491200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 2491201 . G . PASS END=2491204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 2491205 . C T, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.480;ReadPosRankSum=0.666;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:7,7,0:7,7,0:48:85,0,50,472,464,935:255,0,255:14,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,7,7:6,8,6,8 chr1 2491206 . G . PASS END=2491242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1053:0,80,255:33,0 chr1 2491243 . C . PASS END=2491339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1219:0,83,255:36,0 chr1 2491340 . T . PASS END=2491346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,82,255:25,0 chr1 2491347 . G . PASS END=2491347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 2491348 . G . PASS END=2491355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 2491356 . C . PASS END=2491383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 2491384 . A . PASS END=2491391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 2491392 . C . PASS END=2491392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:23,0 chr1 2491393 . C . PASS END=2491409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:24,0 chr1 2491410 . G . PASS END=2491417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,59,255:19,0 chr1 2492063 . G . PASS END=2492070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 2492071 . A . PASS END=2492095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,831:0,66,255:26,0 chr1 2492096 . G . PASS END=2492106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 2492107 . A . PASS END=2492108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2492109 . C . PASS END=2492110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2492111 . T . PASS END=2492111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,879:0,45,255:26,0 chr1 2492112 . C . PASS END=2492112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:25,0 chr1 2492113 . T . PASS END=2492113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,871:0,45,255:25,0 chr1 2492114 . C . PASS END=2492122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 2492123 . G . PASS END=2492126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 2492127 . C . PASS END=2492127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 2492128 . C . PASS END=2492132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 2492133 . G . PASS END=2492153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,64,255:26,0 chr1 2492933 . C . PASS END=2492936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2492937 . G . PASS END=2492937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 2492938 . C . PASS END=2492938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2492939 . T . PASS END=2492939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 2492940 . T . PASS END=2492957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,787:0,69,255:24,0 chr1 2492958 . C . PASS END=2492958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 2492959 . T . PASS END=2492970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,919:0,62,255:26,0 chr1 2492971 . T . PASS END=2492971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:25,0 chr1 2492972 . C . PASS END=2492996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,878:0,61,255:26,0 chr1 2492997 . C . PASS END=2492998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:40:29:0,40,978:0,40,255:23,0 chr1 2492999 . C . PASS END=2493001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 2493002 . G . PASS END=2493002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:22,0 chr1 2493003 . G . PASS END=2493011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:22,0 chr1 2493012 . T . PASS END=2493012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 2493013 . C . PASS END=2493013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 2493014 . A . PASS END=2493014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 2493015 . C . PASS END=2493022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2493023 . G . PASS END=2493031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,56,255:18,0 chr1 2493032 . A . PASS END=2493032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr1 2493033 . G . PASS END=2493035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:18,0 chr1 2493036 . A . PASS END=2493036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 2493037 . G . PASS END=2493041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,629:0,54,255:18,0 chr1 2493042 . G . PASS END=2493042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 2493043 . C . PASS END=2493043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 2493044 . T . PASS END=2493044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 2493045 . C . PASS END=2493078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,674:0,41,255:20,0 chr1 2493079 . G . PASS END=2493080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2493081 . C . PASS END=2493081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 2493082 . T . PASS END=2493083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:21,0 chr1 2493084 . T . PASS END=2493086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 2493087 . C . PASS END=2493089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:21,0 chr1 2493090 . G . PASS END=2493090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 2493091 . T . PASS END=2493091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:22,0 chr1 2493092 . C . PASS END=2493092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2493093 . C . PASS END=2493095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,784:0,30,255:20,0 chr1 2493096 . G . PASS END=2493096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2493097 . G . PASS END=2493097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 2493098 . C . PASS END=2493098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 2493099 . C . LowGQ END=2493099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,776:2,0,255:21,0 chr1 2493100 . C . PASS END=2493100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:21,0 chr1 2493101 . C . PASS END=2493102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:22,0 chr1 2493103 . C . PASS END=2493107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,889:0,42,255:24,0 chr1 2493108 . G . PASS END=2493123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,815:0,64,255:23,0 chr1 2493124 . G . PASS END=2493124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 2493125 . G . PASS END=2493125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 2493126 . T . PASS END=2493126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 2493127 . G . PASS END=2493141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 2493142 . T . PASS END=2493156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,737:0,57,255:19,0 chr1 2493157 . C . PASS END=2493195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,697:0,60,255:25,0 chr1 2493196 . C . PASS END=2493196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 2493197 . G . PASS END=2493198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 2493199 . C . PASS END=2493199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 2493200 . A . PASS END=2493265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,884:0,69,255:25,0 chr1 2493266 . G . PASS END=2493277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,720:0,44,255:19,0 chr1 2493278 . G . PASS END=2493298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:23,0 chr1 2493299 . A . PASS END=2493299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,731:0,30,255:21,0 chr1 2493300 . C . PASS END=2493304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 2493305 . T . PASS END=2493305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 2493306 . G . PASS END=2493333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:25,0 chr1 2493334 . T . PASS END=2493336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 2493337 . C . PASS END=2493337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2493338 . C . PASS END=2493367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 2493368 . C . PASS END=2493368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 2493369 . C . PASS END=2493369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 2493370 . C . PASS END=2493370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 2493371 . A . PASS END=2493378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 2493379 . C . PASS END=2493396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,374:0,33,255:13,0 chr1 2494304 . G . PASS END=2494329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1210:0,86,255:32,0 chr1 2494330 . G A, 49.93 PASS DP=32;MQ=248.48;MQRankSum=4.724;ReadPosRankSum=3.103;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,15,0:0.484,0.000:31:8,9,0:8,6,0:48:85,0,50,528,564,1093:255,0,255:14,0:4.9928e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,6,9:9,7,8,7 chr1 2494331 . T . PASS END=2494334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 2494335 . G . PASS END=2494335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 2494587 . C . PASS END=2494588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2494589 . G . PASS END=2494589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 2494590 . A . PASS END=2494594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 2494595 . A . PASS END=2494595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 2494596 . C . PASS END=2494598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 2494599 . G . PASS END=2494601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:22,0 chr1 2494602 . G . PASS END=2494604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 2494605 . G . PASS END=2494605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 2494606 . A . LowGQ END=2494606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,712:0,0,255:21,0 chr1 2494607 . A . PASS END=2494607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2494608 . G . PASS END=2494608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 2494609 . G . PASS END=2494610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 2494611 . G . PASS END=2494611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 2494612 . A . PASS END=2494631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,894:0,64,255:26,0 chr1 2494632 . C . PASS END=2494633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 2494634 . G . PASS END=2494636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 2494637 . G . PASS END=2494645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 2494646 . G . PASS END=2494646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 2494647 . G . PASS END=2494657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:30,0 chr1 2494658 . G . PASS END=2494658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 2494659 . G . PASS END=2494661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 2494662 . G . PASS END=2494662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 2494663 . C . PASS END=2494663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 2494664 . C . PASS END=2494664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 2494665 . G . PASS END=2494666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 2494667 . G . PASS END=2494667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 2494668 . G . PASS END=2494669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 2494670 . G . PASS END=2494670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 2494671 . G . PASS END=2494676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 2494677 . A . PASS END=2494687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,958:0,70,255:27,0 chr1 2494688 . C . PASS END=2494688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2494689 . A . PASS END=2494689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 2494690 . C . PASS END=2494691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 2494692 . G . PASS END=2494709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:22:0,61,854:0,61,255:26,0 chr1 2494710 . T . PASS END=2494712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 2518235 . A . PASS END=2518251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:24,0 chr1 2518252 . A . PASS END=2518267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 2518268 . C . PASS END=2518268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 2518269 . C . PASS END=2518284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1166:0,85,255:33,0 chr1 2518285 . G . PASS END=2518285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:30,0 chr1 2518286 . G . PASS END=2518317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1164:0,83,255:34,0 chr1 2518318 . G . PASS END=2518318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 2518319 . G . PASS END=2518329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1140:0,85,255:33,0 chr1 2518330 . C . PASS END=2518330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:27,0 chr1 2518331 . A . PASS END=2518333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1202:0,83,255:29,0 chr1 2518334 . G . PASS END=2518350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:25:0,72,902:0,74,255:25,0 chr1 2518351 . G . PASS END=2518351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 2518352 . G . PASS END=2518357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 2518358 . T . PASS END=2518367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,53,255:18,0 chr1 2518368 . A . PASS END=2518368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr1 2518369 . G . PASS END=2518369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 2518370 . C . PASS END=2518375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 2518376 . G . PASS END=2518387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 2518530 . G . PASS END=2518530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2518531 . C . PASS END=2518534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2518535 . G . PASS END=2518535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 2518536 . G . PASS END=2518544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 2518545 . A . PASS END=2518545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 2518546 . G . PASS END=2518556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 2518557 . G . PASS END=2518557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 2518558 . A . PASS END=2518558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 2518559 . G . PASS END=2518559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 2518560 . C . PASS END=2518560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,615:0,21,255:19,0 chr1 2518561 . A . PASS END=2518573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,729:0,60,255:24,0 chr1 2518574 . G . PASS END=2518574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 2518575 . G . PASS END=2518583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 2518584 . C . PASS END=2518584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 2518585 . G . PASS END=2518592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr1 2518593 . G . PASS END=2518593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 2518594 . G . PASS END=2518614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 2518615 . T . PASS END=2518621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2518622 . G . PASS END=2518624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2518625 . C . PASS END=2518625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 2518626 . C . PASS END=2518630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 2518631 . C . PASS END=2518643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,720:0,47,255:19,0 chr1 2518644 . C . PASS END=2518646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 2518647 . C . PASS END=2518681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,659:0,41,255:19,0 chr1 2518682 . G . PASS END=2518682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 2518683 . C . PASS END=2518694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 2518695 . G . PASS END=2518701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 2518702 . A . PASS END=2518702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:10,0 chr1 2518703 . G . PASS END=2518706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 2518707 . T . PASS END=2518707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 2518708 . T . PASS END=2518712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 2518713 . G . PASS END=2518713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:12,0 chr1 2518714 . A . PASS END=2518731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 2518732 . G . PASS END=2518734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,315:0,20,255:8,0 chr1 2519180 . A . PASS END=2519181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 2519182 . C . PASS END=2519182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 2519183 . T . PASS END=2519184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:30,0 chr1 2519185 . T . PASS END=2519185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:28,0 chr1 2519186 . A . PASS END=2519187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:31,0 chr1 2519188 . C . PASS END=2519189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1141:0,72,255:30,0 chr1 2519190 . G . PASS END=2519224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1123:0,85,255:34,0 chr1 2519225 . T . PASS END=2519226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 2519227 . A . PASS END=2519227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 2519228 . A . PASS END=2519228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,936:0,76,255:29,0 chr1 2519229 . G . PASS END=2519229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 2519230 . C . PASS END=2519230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,950:0,60,255:27,0 chr1 2519231 . G . PASS END=2519231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 2519775 . G . PASS END=2519892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,104,1405:0,104,255:40,0 chr1 2519969 . G . PASS END=2520064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:89:40:0,89,1241:0,89,255:40,0 chr1 2520361 . G . PASS END=2520361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 2520362 . T . PASS END=2520363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2520364 . G . PASS END=2520395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,674:0,44,255:19,0 chr1 2520396 . T . PASS END=2520396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr1 2520397 . C . PASS END=2520416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr1 2520417 . A . PASS END=2520417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 2520418 . A . PASS END=2520425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2520426 . A . PASS END=2520426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 2520427 . T . PASS END=2520435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 2520436 . T . PASS END=2520436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,693:0,24,255:20,0 chr1 2520437 . C . PASS END=2520452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 2520453 . G . PASS END=2520467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,698:0,46,255:19,0 chr1 2520468 . G . PASS END=2520468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 2520469 . A . PASS END=2520479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 2520849 . T . PASS END=2520899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:35:0,85,1317:0,85,255:40,0 chr1 2520900 . G . PASS END=2520900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:30,0 chr1 2520901 . T . PASS END=2520912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:31,0 chr1 2520913 . C . PASS END=2520918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 2522429 . C . PASS END=2522429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 2522430 . T . PASS END=2522528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1274:0,91,255:40,0 chr1 2522996 . C . PASS END=2523000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1202:0,83,255:34,0 chr1 2523001 . C . PASS END=2523001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:35,0 chr1 2523002 . T . PASS END=2523017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1308:0,92,255:37,0 chr1 2523018 . C . PASS END=2523018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 2523019 . G . PASS END=2523072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:37:0,80,1266:0,80,255:40,0 chr1 2523371 . C . PASS END=2523377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:30,0 chr1 2523378 . T . PASS END=2523378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 2523379 . A . PASS END=2523381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 2523382 . T . PASS END=2523382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 2523383 . G . PASS END=2523390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 2523391 . A . PASS END=2523394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,993:0,76,255:30,0 chr1 2523395 . C . PASS END=2523395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 2523396 . T . PASS END=2523396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 2523397 . G . PASS END=2523397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 2523398 . C . PASS END=2523399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 2523400 . C . PASS END=2523402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 2523403 . G . PASS END=2523404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 2523405 . G . PASS END=2523405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 2523406 . T . PASS END=2523409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1155:0,90,255:30,0 chr1 2523410 . A . PASS END=2523410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:45:31:0,45,903:0,45,255:29,0 chr1 2523411 . T . PASS END=2523431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1135:0,93,255:31,0 chr1 2523432 . T . PASS END=2523437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,80,255:25,0 chr1 2523438 . C . PASS END=2523438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:20,0 chr1 2523439 . C . PASS END=2523466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:25,0 chr1 2524094 . C . PASS END=2524094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 2524095 . T . PASS END=2524095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,441:0,1,255:14,0 chr1 2524096 . T . PASS END=2524096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,540:0,51,255:17,0 chr1 2524097 . A . PASS END=2524097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:15,0 chr1 2524098 . T . PASS END=2524098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr1 2524099 . A . PASS END=2524099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr1 2524100 . G . PASS END=2524101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 2524102 . C . PASS END=2524102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 2524103 . T . PASS END=2524103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 2524104 . T . PASS END=2524105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:17,0 chr1 2524106 . C . PASS END=2524106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:17,0 chr1 2524107 . C . PASS END=2524109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 2524110 . A . PASS END=2524110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 2524111 . C . PASS END=2524114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 2524115 . T . PASS END=2524116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 2524117 . C . PASS END=2524119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,576:0,40,255:17,0 chr1 2524120 . T . PASS END=2524120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 2524121 . G . PASS END=2524121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,596:0,10,255:16,0 chr1 2524122 . T . PASS END=2524122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 2524123 . C . PASS END=2524123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr1 2524124 . A . PASS END=2524124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 2524125 . G . PASS END=2524126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 2524127 . A . PASS END=2524129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 2524130 . G . PASS END=2524132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,574:0,34,255:16,0 chr1 2524133 . T . PASS END=2524134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 2524135 . C . PASS END=2524135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,482:0,4,255:14,0 chr1 2524136 . C . PASS END=2524159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 2524272 . G . PASS END=2524283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr1 2524284 . T . PASS END=2524284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:28,0 chr1 2524285 . G . PASS END=2524405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1180:0,83,255:40,0 chr1 2525253 . C . PASS END=2525265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,762:0,66,255:22,0 chr1 2525266 . G . PASS END=2525266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 2525267 . C . PASS END=2525272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 2525273 . G . PASS END=2525273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 2525274 . T . PASS END=2525283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,834:0,61,255:26,0 chr1 2525284 . C . PASS END=2525285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 2525286 . C . PASS END=2525286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 2525287 . G . PASS END=2525300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr1 2525301 . T . PASS END=2525301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,923:0,40,255:26,0 chr1 2525302 . G . PASS END=2525305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr1 2525306 . C . PASS END=2525347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,892:0,67,255:26,0 chr1 2525348 . G . PASS END=2525387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:17:0,42,630:0,44,255:19,0 chr1 2525824 . C . PASS END=2525882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:34:0,86,1211:0,86,255:40,0 chr1 2526229 . A . PASS END=2526242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1230:0,81,255:38,0 chr1 2526243 . C . PASS END=2526243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:38,1 chr1 2526244 . T . PASS END=2526332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:39:0,80,1293:0,80,255:40,1 chr1 2526715 . A . PASS END=2526715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 2526716 . T . PASS END=2526719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:30,0 chr1 2526720 . A . PASS END=2526720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 2526721 . G . PASS END=2526722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 2526723 . A . PASS END=2526723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 2526724 . C . PASS END=2526733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:30,0 chr1 2526734 . A . PASS END=2526734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 2526735 . G . PASS END=2526736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:30,0 chr1 2526737 . C . PASS END=2526745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:34,0 chr1 2526746 . A . PASS END=2526746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1266:0,105,255:35,0 chr1 2526747 . T . PASS END=2526754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:66:35:0,66,1233:0,66,255:37,0 chr1 2526755 . A . PASS END=2526755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 2526756 . G . PASS END=2526757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:76:38:0,76,1365:0,76,255:37,0 chr1 2526758 . A . PASS END=2526760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1449:0,101,255:38,0 chr1 2526761 . T . PASS END=2526761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 2526762 . A . PASS END=2526771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1388:0,98,255:38,0 chr1 2526772 . C . PASS END=2526772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr1 2526773 . C . PASS END=2526790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1280:0,92,255:36,0 chr1 2526791 . C . PASS END=2526791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1147:0,58,255:32,0 chr1 2526792 . T . PASS END=2526798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1274:0,91,255:35,0 chr1 2527448 . C . PASS END=2527546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:41:0,93,1388:0,93,255:40,0 chr1 2528000 . C . PASS END=2528003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 2528004 . C . PASS END=2528004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 2528005 . T . PASS END=2528030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 2528031 . C . PASS END=2528031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2528032 . T . PASS END=2528032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2528033 . G . PASS END=2528043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 2528044 . A . PASS END=2528044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 2528045 . G . PASS END=2528046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1074:0,52,255:26,1 chr1 2528047 . C . PASS END=2528047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:27,0 chr1 2528048 . C . PASS END=2528060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1186:0,90,255:31,0 chr1 2528061 . A . PASS END=2528061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 2528062 . T . PASS END=2528083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1119:0,87,255:31,0 chr1 2528084 . A . PASS END=2528094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 2528095 . A . PASS END=2528095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 2528096 . G . PASS END=2528111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:25,0 chr1 2528112 . A . PASS END=2528113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:20,0 chr1 2528114 . T . PASS END=2528115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2528116 . T . PASS END=2528123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 2528124 . A . PASS END=2528124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:16,0 chr1 2528125 . G . PASS END=2528128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 2529646 . C . PASS END=2529646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2529647 . T . PASS END=2529655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr1 2529656 . T . PASS END=2529656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 2529657 . T . PASS END=2529662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 2529663 . G . PASS END=2529663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 2529664 . T . PASS END=2529696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1101:0,83,255:32,0 chr1 2529697 . G . PASS END=2529720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,986:0,78,255:26,0 chr1 2529721 . C . PASS END=2529722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 2529723 . G . PASS END=2529738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 2529739 . C . PASS END=2529739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 2530093 . C . PASS END=2530229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:36:0,90,1350:0,103,255:40,0 chr1 2535323 . C . PASS END=2535412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,110,1503:0,110,255:40,0 chr1 2535586 . C . PASS END=2535598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:26,0 chr1 2535599 . G . PASS END=2535600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2535601 . C . PASS END=2535601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 2535602 . T . PASS END=2535607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 2535608 . T . PASS END=2535609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 2535610 . C . PASS END=2535611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2535612 . G . PASS END=2535612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:25,0 chr1 2535613 . C . PASS END=2535615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2535616 . C . PASS END=2535616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 2535617 . T . PASS END=2535617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,919:0,56,255:25,0 chr1 2535618 . G . PASS END=2535631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:27:0,63,945:0,70,255:25,0 chr1 2535632 . T . PASS END=2535632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,846:0,51,255:23,0 chr1 2535633 . G . PASS END=2535637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,955:0,67,255:25,0 chr1 2535638 . A . PASS END=2535639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 2535640 . G . PASS END=2535640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:25,0 chr1 2535641 . C . PASS END=2535646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2535647 . T . PASS END=2535650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 2535651 . T . PASS END=2535651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:23,0 chr1 2535652 . G . PASS END=2535671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,839:0,66,255:25,0 chr1 2535672 . G . PASS END=2535672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 2535673 . C . PASS END=2535674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2535675 . G . PASS END=2535675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 2535676 . C . PASS END=2535688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:24,0 chr1 2535689 . G . PASS END=2535689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 2535690 . A . PASS END=2535696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 2535697 . G . PASS END=2535697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 2535698 . A . PASS END=2535699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,687:0,66,255:22,0 chr1 2535700 . C . PASS END=2535700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 2535701 . T . PASS END=2535703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 2535704 . A . PASS END=2535704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 2535705 . G . PASS END=2535709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 2535710 . G . PASS END=2535720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,47,255:17,0 chr1 2536997 . C . PASS END=2537012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:25,0 chr1 2537013 . C . PASS END=2537014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 2537015 . G . PASS END=2537025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,898:0,62,255:26,0 chr1 2537026 . A . PASS END=2537045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1041:0,87,255:29,0 chr1 2537046 . A . PASS END=2537047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 2537048 . G . PASS END=2537050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr1 2537051 . G . PASS END=2537053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 2537054 . C . PASS END=2537057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2537058 . T . PASS END=2537062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 2537687 . G . PASS END=2537702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,892:0,69,255:25,0 chr1 2537703 . C . PASS END=2537703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 2537704 . T . PASS END=2537704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 2537705 . G . PASS END=2537749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1000:0,80,255:32,0 chr1 2537750 . C . PASS END=2537766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:26:0,74,947:0,74,255:26,0 chr1 2537767 . T . PASS END=2537772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 2537773 . G . PASS END=2537801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 2537802 . A . PASS END=2537802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 2537803 . G . PASS END=2537805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 2538413 . C . PASS END=2538432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:26,0 chr1 2538433 . T . PASS END=2538439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 2538440 . C . PASS END=2538440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 2538441 . C . PASS END=2538446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 2538447 . C . PASS END=2538448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 2538449 . A . PASS END=2538449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:24,0 chr1 2538450 . G . PASS END=2538450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 2538451 . C . PASS END=2538468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 2538469 . A . PASS END=2538469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 2538470 . T . PASS END=2538483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1092:0,87,255:29,0 chr1 2538484 . T . PASS END=2538484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:23,0 chr1 2538485 . G . PASS END=2538498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 2538499 . T . PASS END=2538508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:22:0,51,765:0,59,255:19,0 chr1 2540778 . T . PASS END=2540792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:22,0 chr1 2540793 . A . PASS END=2540793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 2540794 . G . PASS END=2540798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:26,0 chr1 2540799 . A . PASS END=2540799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 2540800 . C . PASS END=2540800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 2540801 . A . PASS END=2540819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr1 2540820 . C . PASS END=2540820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 2540821 . A . PASS END=2540835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr1 2540836 . G . PASS END=2540848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 2540849 . T . PASS END=2540849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:21,0 chr1 2540850 . C . PASS END=2540858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 2541109 . C . PASS END=2541112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 2541113 . G . PASS END=2541117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 2541118 . T . PASS END=2541118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 2541119 . G . PASS END=2541123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 2541124 . C . PASS END=2541124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 2541125 . C . PASS END=2541249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1187:0,87,255:40,0 chr1 2541250 . T . PASS END=2541250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:32,0 chr1 2541251 . G . PASS END=2541270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:34,0 chr1 2542720 . C . PASS END=2542726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:24,0 chr1 2542727 . C . PASS END=2542727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 2542728 . A . PASS END=2542736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:24:0,64,870:0,64,255:26,0 chr1 2542737 . G . PASS END=2542768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:31,0 chr1 2542769 . C . PASS END=2542769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 2542770 . T . PASS END=2542779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1170:0,93,255:31,0 chr1 2543566 . C . PASS END=2543623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1103:0,83,255:34,0 chr1 2543624 . A . PASS END=2543631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 2543632 . G . PASS END=2543633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 2543634 . A . PASS END=2543635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 2543636 . C . PASS END=2543636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2543637 . T . PASS END=2543643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 2560770 . C . PASS END=2560771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 2560772 . C . PASS END=2560772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 2560773 . T . PASS END=2560805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:20:0,60,731:0,60,255:26,0 chr1 2560806 . G . PASS END=2560816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2560817 . A . PASS END=2560817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2560818 . C . PASS END=2560818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:26,2 chr1 2560819 . C . PASS END=2560819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,947:0,18,255:26,2 chr1 2560820 . A . PASS END=2560821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,994:0,21,255:27,2 chr1 2560822 . C . PASS END=2560822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 2560823 . A . PASS END=2560843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr1 2560844 . C . PASS END=2560844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 2560845 . C . PASS END=2560865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 2560866 . T . PASS END=2560881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 2560882 . G A, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,728,57,728:255,57,0:0,0:1.0418e+02,5.4182e+01,1.6567e-05,4.5000e+02,8.8952e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,11:0,0,9,10:2560882 chr1 2560883 . G . PASS END=2560902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:14:0,34,540:0,34,255:13,0 chr1 2560903 . T G, 87.75 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,14,0:1.000,0.000:14:0,6,0:0,8,0:38:126,41,0,452,41,452:255,42,0:0,0:8.7752e+01,3.7752e+01,7.2901e-04,4.4853e+02,7.2522e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,10:0,0,8,6:2560882 chr1 2560904 . G . PASS END=2560909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 2560910 . T . PASS END=2560910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:9,0 chr1 2560911 . C . PASS END=2560911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 2560912 . G . PASS END=2560913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 2560914 . A . LowGQ END=2560914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,357:8,0,255:8,0 chr1 2560915 . C . PASS END=2560915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 2560916 . T . PASS END=2560916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2560917 . T . PASS END=2560918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2560919 . C . PASS END=2560920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2560921 . C . PASS END=2560921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 2560922 . A . PASS END=2560922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr1 2560923 . T . PASS END=2560923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 2572807 . T . PASS END=2572821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,592:0,51,255:19,0 chr1 2572822 . G . PASS END=2572832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 2572833 . C . PASS END=2572903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,599:0,51,255:19,0 chr1 2572904 . A . PASS END=2572904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 2572905 . C . PASS END=2572933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,552:0,48,255:17,0 chr1 2572934 . T . PASS END=2572934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 2572935 . C . PASS END=2572945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:17:0,46,714:0,46,255:19,0 chr1 2572946 . C . PASS END=2572946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2572947 . A . PASS END=2572949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 2572950 . G . PASS END=2572950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 2572951 . C . PASS END=2572953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2572954 . G . PASS END=2572960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,727:0,47,255:19,0 chr1 2572961 . A . PASS END=2572961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2572962 . G . PASS END=2572962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2572963 . G . PASS END=2572968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 2572969 . G . PASS END=2572970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,751:0,49,255:20,0 chr1 2572971 . G . PASS END=2572972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2572973 . G . PASS END=2572997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,607:0,51,255:18,0 chr1 2572998 . T . PASS END=2572998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 2572999 . G . PASS END=2573031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 2573032 . C . PASS END=2573039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 2573040 . C . PASS END=2573042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2573043 . G . PASS END=2573048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 2573049 . A . PASS END=2573050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 2573051 . G . PASS END=2573075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,725:0,63,255:23,0 chr1 2573076 . C . PASS END=2573076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 2573077 . C . PASS END=2573079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 2573080 . G . PASS END=2573097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 2573098 . C . PASS END=2573098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 2573099 . T . PASS END=2573144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,607:0,46,255:19,0 chr1 2573145 . G . PASS END=2573145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 2573146 . C . PASS END=2573160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:17,0 chr1 2573161 . A . PASS END=2573161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 2573162 . T . PASS END=2573162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 2573163 . G . PASS END=2573191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,653:0,51,255:19,0 chr1 2573192 . T . PASS END=2573192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,562:0,18,255:15,0 chr1 2573193 . C . PASS END=2573198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:17,0 chr1 2573199 . A G, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,734,57,734:255,57,0:0,0:1.0418e+02,5.4184e+01,1.6567e-05,4.5000e+02,8.8954e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,15:0,0,13,6 chr1 2573200 . C . PASS END=2573215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:17,0 chr1 2573216 . G . PASS END=2573216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 2573217 . C . PASS END=2573236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,553:0,48,255:19,0 chr1 2573237 . G . PASS END=2573268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,548:0,51,255:18,0 chr1 2573269 . A . PASS END=2573269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 2573270 . C . PASS END=2573285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 2573286 . G . PASS END=2573287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 2573288 . C . PASS END=2573298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 2573299 . T . PASS END=2573320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 2573321 . T . PASS END=2573321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 2573322 . C . PASS END=2573323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 2573324 . T . PASS END=2573324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 2573325 . G . PASS END=2573334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 2575703 . C . PASS END=2575714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 2575715 . C . PASS END=2575738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:26,0 chr1 2575739 . A . PASS END=2575814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1208:0,83,255:35,0 chr1 2575815 . C . PASS END=2575825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 2575826 . C . PASS END=2575826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 2575827 . T . PASS END=2575837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 2575838 . C . PASS END=2575838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 2575839 . A . PASS END=2575840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:26,0 chr1 2575841 . C . PASS END=2575848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr1 2575849 . G . PASS END=2575850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 2575851 . G . PASS END=2575852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2575853 . T . PASS END=2575860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 2575861 . A . PASS END=2575867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1041:0,84,255:28,0 chr1 2575868 . G . PASS END=2575886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,65,255:26,0 chr1 2575887 . T . PASS END=2575887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 2575888 . C . PASS END=2575893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 2575894 . G . PASS END=2575901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,798:0,50,255:19,0 chr1 2575902 . G . PASS END=2575902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2575903 . C . PASS END=2575904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 2575905 . T . PASS END=2575905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 2575906 . C . PASS END=2575917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr1 2576732 . C . PASS END=2576758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:13,0 chr1 2576759 . G . PASS END=2576788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:18,0 chr1 2576789 . T . PASS END=2576789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,454:0,34,255:16,0 chr1 2576790 . T . PASS END=2576790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 2576791 . T . PASS END=2576791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 2576792 . T . PASS END=2576843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,584:0,40,255:19,0 chr1 2576844 . A . PASS END=2576844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,512:0,7,255:16,0 chr1 2576845 . G . PASS END=2576845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 2576846 . G . PASS END=2576846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 2576847 . G . PASS END=2576862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,637:0,40,255:18,0 chr1 2576863 . A . PASS END=2576863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 2576864 . G . PASS END=2576865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 2576866 . T . PASS END=2576866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 2576867 . G . PASS END=2576895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,568:0,41,255:16,0 chr1 2576896 . A . PASS END=2576896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 2576897 . G . PASS END=2576898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 2576899 . C . PASS END=2576900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2576901 . C . PASS END=2576905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2576906 . T . PASS END=2576907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 2576908 . A . PASS END=2576922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:15,0 chr1 2576923 . T . PASS END=2576932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 2576933 . G . PASS END=2576953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 2576954 . C . PASS END=2576959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 2576960 . C T, 49.13 PASS DP=10;MQ=250.00;MQRankSum=2.383;ReadPosRankSum=1.568;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,4,0:0.400,0.000:10:5,0,0:1,4,0:48:84,0,50,135,207,342:117,0,195:4,0:4.9125e+01,7.4811e-05,5.3000e+01,1.3506e+02,2.4136e+02,3.4464e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,2,2:2,4,2,2 chr1 2576961 . G . PASS END=2576977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 2576978 . C . PASS END=2576998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr1 2576999 . C . PASS END=2576999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 2577000 . T . PASS END=2577000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 2577001 . T . LowGQ END=2577001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:4,0 chr1 2577002 . C . PASS END=2577002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 2700154 . C . PASS END=2700154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 2700155 . T . PASS END=2700174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr1 2700175 . G . PASS END=2700176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 2700177 . G . PASS END=2700185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2700186 . C . PASS END=2700186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 2700187 . C . PASS END=2700187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2700188 . C . PASS END=2700206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 2700207 . C . PASS END=2700208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 2700209 . T . PASS END=2700214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2700215 . G . PASS END=2700216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2700217 . C . PASS END=2700222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 2700223 . C . PASS END=2700228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2700229 . C . PASS END=2700229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 2700230 . A . PASS END=2700233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr1 2700234 . T . PASS END=2700234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 2700235 . G . PASS END=2700253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:24,0 chr1 2700254 . G . PASS END=2700254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 2700255 . T . PASS END=2700298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,892:0,63,255:25,0 chr1 2700299 . A . PASS END=2700320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,675:0,48,255:19,0 chr1 2702384 . C . PASS END=2702406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,385:0,36,255:13,0 chr1 2702407 . A . PASS END=2702407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr1 2702408 . G . PASS END=2702413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 2702414 . C . PASS END=2702415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 2702416 . A . PASS END=2702421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2702422 . T . PASS END=2702447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 2702448 . C . PASS END=2702448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 2702449 . C . PASS END=2702462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 2702463 . C . PASS END=2702476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 2702477 . G . PASS END=2702487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:16,0 chr1 2702488 . T . PASS END=2702488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 2702489 . G . PASS END=2702501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 2702502 . A . PASS END=2702502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 2702503 . A . PASS END=2702521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,621:0,51,255:18,0 chr1 2702522 . G . PASS END=2702522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:14,0 chr1 2702523 . G . PASS END=2702546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 2702547 . G . PASS END=2702547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 2702548 . A . PASS END=2702557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 2702558 . T . PASS END=2702558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 2702559 . G . PASS END=2702564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr1 2702565 . A . PASS END=2702565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr1 2702566 . G . PASS END=2702579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr1 2702580 . C . PASS END=2702580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 2702581 . T . PASS END=2702584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2702585 . C . PASS END=2702585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2702586 . C . PASS END=2702586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 2702587 . A . PASS END=2702588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 2704046 . C . PASS END=2704092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,358:0,33,255:13,0 chr1 2704093 . G . PASS END=2704093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 2704094 . T . PASS END=2704101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2704102 . G . PASS END=2704105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 2704106 . A . PASS END=2704119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 2704120 . G . PASS END=2704129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 2704130 . T . PASS END=2704138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 2704139 . C . PASS END=2704139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 2704140 . A . PASS END=2704142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 2704143 . A . PASS END=2704143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 2704144 . G . PASS END=2704153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 2704154 . G . PASS END=2704154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 2704155 . G . PASS END=2704162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 2704163 . C . PASS END=2704163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 2704164 . A . PASS END=2704164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 2704165 . G . PASS END=2704165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 2704166 . G . PASS END=2704166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 2704167 . C . PASS END=2704167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 2704168 . G . PASS END=2704213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 2704214 . G . PASS END=2704214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 2704215 . T . PASS END=2704216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 2704217 . C . PASS END=2704217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 2704218 . T . PASS END=2704256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 2704257 . A . PASS END=2704271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:8:0,21,310:0,24,255:8,0 chr1 2706068 . C . PASS END=2706093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,709:0,63,255:26,0 chr1 2706094 . C . PASS END=2706094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 2706095 . T . PASS END=2706100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 2706101 . G . PASS END=2706101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 2706102 . C . PASS END=2706104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 2706105 . C . PASS END=2706135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 2706136 . G . PASS END=2706136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 2706137 . C . PASS END=2706139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 2706140 . G . PASS END=2706140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 2706141 . G . PASS END=2706146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 2706147 . G . PASS END=2706147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr1 2706148 . C . PASS END=2706151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 2706152 . A . PASS END=2706152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 2706153 . G . PASS END=2706153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 2706154 . C . PASS END=2706175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,1035:0,72,255:26,0 chr1 2706176 . A . PASS END=2706176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 2706177 . G . PASS END=2706185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 2706186 . G . PASS END=2706186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 2706187 . C . PASS END=2706209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 2706210 . G . PASS END=2706221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:17:0,46,599:0,46,255:17,0 chr1 2706222 . T . PASS END=2706222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 2706223 . G . PASS END=2706265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 2706266 . A . PASS END=2706266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 2706267 . C . PASS END=2706269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 2706270 . A . PASS END=2706270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr1 2706271 . G . PASS END=2706285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 2706286 . G . PASS END=2706286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 2706287 . A . PASS END=2706289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 2706290 . G . PASS END=2706290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2706291 . C . PASS END=2706299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 2706300 . C . PASS END=2706307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2706308 . C . PASS END=2706344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 2706345 . C . PASS END=2706345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 2706346 . C . PASS END=2706347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 2706348 . C . PASS END=2706348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 2706349 . C . PASS END=2706364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 2706365 . T . PASS END=2706368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 2706369 . C . PASS END=2706372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 2706373 . T . PASS END=2706435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr1 2706436 . C . PASS END=2706475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,302:0,24,255:9,0 chr1 2706476 . G . PASS END=2706547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr1 2706548 . A . PASS END=2706560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 2706561 . C . PASS END=2706570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr1 2706571 . G . PASS END=2706572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,255:3,0 chr1 2706573 . C . PASS END=2706599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,210:6,0 chr1 2706600 . G . PASS END=2706630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 2706631 . G . PASS END=2706642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 2706643 . C . LowGQ END=2706643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 2706644 . A . PASS END=2706644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 2706645 . G . PASS END=2706652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 2706653 . C . PASS END=2706653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 2706654 . G . PASS END=2706661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 2706662 . T . PASS END=2706662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 2706663 . C . PASS END=2706683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 2706684 . T . PASS END=2706684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:14,0 chr1 2706685 . C . PASS END=2706696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:15,0 chr1 2706697 . C . PASS END=2706697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 2706698 . T . PASS END=2706701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 2706702 . A . PASS END=2706702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 2706703 . G . PASS END=2706726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,515:0,45,255:18,0 chr1 2706727 . C . PASS END=2706731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2706732 . G . PASS END=2706756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,653:0,54,255:19,0 chr1 2706757 . G . PASS END=2706765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 2706766 . A . PASS END=2706766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 2706767 . G . PASS END=2706800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,709:0,66,255:22,0 chr1 2706801 . A . PASS END=2706817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 2706818 . G . PASS END=2706863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,707:0,60,255:23,0 chr1 2706864 . A . PASS END=2706906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,44,255:19,0 chr1 2706907 . C . PASS END=2706907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 2706908 . T . PASS END=2706911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 2716609 . C . PASS END=2716628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,358:0,33,255:13,0 chr1 2716629 . G . PASS END=2716629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 2716630 . G . PASS END=2716631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 2716632 . T . PASS END=2716633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 2716634 . G . PASS END=2716656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,660:0,41,255:19,0 chr1 2716657 . C . PASS END=2716687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,775:0,60,255:26,0 chr1 2716688 . G . PASS END=2716722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:31,0 chr1 2716723 . T . PASS END=2716734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 2716735 . C . PASS END=2716760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 2716761 . C . PASS END=2716770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 2716771 . G . PASS END=2716772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 2716773 . T . PASS END=2716788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:22,0 chr1 2716789 . C . PASS END=2716802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:21:0,45,675:0,63,255:19,0 chr1 2716803 . C . PASS END=2716805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2716806 . G . PASS END=2716808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2716809 . A . PASS END=2716811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2716812 . T . PASS END=2716853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 2716854 . T . PASS END=2716854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 2716855 . G . PASS END=2716865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 2716866 . A . PASS END=2716866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 2716867 . T . PASS END=2716869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 2716870 . A . PASS END=2716870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 2716871 . A . PASS END=2716890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:18,0 chr1 2716891 . T . PASS END=2716891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 2716892 . G . PASS END=2716906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 2716907 . G C, 49.09 PASS DP=19;MQ=248.84;MQRankSum=3.592;ReadPosRankSum=0.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:3,4,0:8,4,0:48:84,0,50,286,357,643:253,0,255:10,0:4.9089e+01,7.5329e-05,5.3000e+01,2.8607e+02,3.9132e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,3,5:6,5,3,5 chr1 2716908 . A . PASS END=2716935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 2716936 . G . PASS END=2716937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 2716938 . A . PASS END=2716944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 2716945 . A . PASS END=2716952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,34,255:13,0 chr1 2716953 . C . PASS END=2716955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 2716956 . G . PASS END=2716957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 2716958 . G . PASS END=2716960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 2716961 . G . PASS END=2716970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 2716971 . A . PASS END=2716971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 2716972 . G . PASS END=2716978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 2716979 . C . PASS END=2716997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:17,0 chr1 2716998 . T . PASS END=2716998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 2716999 . G . PASS END=2717013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 2717014 . C . PASS END=2717014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 2717015 . G . PASS END=2717030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,621:0,51,255:17,0 chr1 2717031 . A . PASS END=2717031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 2717032 . C . PASS END=2717032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 2717033 . T . PASS END=2717033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 2717034 . T . PASS END=2717039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:15,0 chr1 2717040 . T . PASS END=2717040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 2717041 . G . PASS END=2717093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,576:0,40,255:18,0 chr1 2717094 . T . PASS END=2717094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 2717095 . C . PASS END=2717112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,714:0,44,255:19,0 chr1 2717113 . G . PASS END=2717116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2717117 . G . PASS END=2717142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,653:0,43,255:19,0 chr1 2717143 . A . PASS END=2717143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:16,0 chr1 2717144 . G . PASS END=2717151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,629:0,40,255:19,0 chr1 2717152 . C . PASS END=2717154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 2717155 . T . PASS END=2717155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 2717156 . G . PASS END=2717160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2717161 . C . PASS END=2717161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 2717162 . C . PASS END=2717164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2717165 . G . PASS END=2717177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,713:0,47,255:19,0 chr1 2717178 . A . PASS END=2717179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2717180 . C . PASS END=2717180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 2717181 . T . PASS END=2717181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 2717182 . G . PASS END=2717182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 2717183 . G . PASS END=2717187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 2717188 . C . PASS END=2717188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 2717189 . C . PASS END=2717195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 2717196 . C . PASS END=2717196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 2717197 . A . PASS END=2717199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 2717200 . A . PASS END=2717201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 2717202 . G . PASS END=2717202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 2717203 . A . PASS END=2717206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 2717207 . C . PASS END=2717209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2717210 . G . PASS END=2717210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:18,0 chr1 2717211 . G . PASS END=2717212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 2717213 . G . PASS END=2717213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 2717214 . G . PASS END=2717215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 2717216 . C . PASS END=2717217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,660:0,29,255:19,0 chr1 2717218 . C . PASS END=2717218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 2717219 . C . PASS END=2717220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2717221 . C . PASS END=2717221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 2717222 . C . PASS END=2717224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2717225 . C . PASS END=2717231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 2717232 . C . PASS END=2717232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:17,0 chr1 2717233 . G . PASS END=2717239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:46:21:0,46,714:0,46,255:21,0 chr1 2717240 . G . PASS END=2717243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 2717244 . A . PASS END=2717244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 2717245 . G . PASS END=2717245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 2717246 . G . PASS END=2717246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:21,0 chr1 2717247 . G . PASS END=2717248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 2717249 . A . PASS END=2717370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,607:0,41,255:19,0 chr1 2717371 . C . PASS END=2717392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:10:0,30,380:0,30,255:13,0 chr1 2938251 . A . PASS END=2938251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 2938252 . T . PASS END=2938258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1042:0,87,255:30,0 chr1 2938259 . T . PASS END=2938259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:29,0 chr1 2938260 . C . PASS END=2938263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 2938264 . A . PASS END=2938264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 2938265 . C . PASS END=2938405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1092:0,87,255:40,0 chr1 2938406 . C . PASS END=2938433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,922:0,72,255:25,0 chr1 2938434 . G . PASS END=2938434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,860:0,36,255:24,0 chr1 2938435 . C . PASS END=2938490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,68,255:26,0 chr1 2938491 . A . PASS END=2938491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 2938492 . C . PASS END=2938545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,854:0,61,255:26,0 chr1 2938546 . G . PASS END=2938557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 2938558 . G . PASS END=2938649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,792:0,66,255:26,0 chr1 2938650 . C . PASS END=2938692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,659:0,41,255:19,0 chr1 2938693 . C . PASS END=2938702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 2938703 . T . PASS END=2938703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 2938704 . G . PASS END=2938707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2938708 . C . PASS END=2938709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2938710 . G . PASS END=2938713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2938714 . T . PASS END=2938715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 2938716 . G . PASS END=2938753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:23,0 chr1 2938754 . C . PASS END=2938754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 2938755 . A . PASS END=2938823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,906:0,62,255:26,0 chr1 2938824 . C . PASS END=2938824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 2938825 . T . PASS END=2938855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 2938856 . C . PASS END=2938864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,790:0,50,255:19,0 chr1 2938865 . C . PASS END=2938866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2938867 . G . PASS END=2938871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 2938872 . C . PASS END=2938878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:21,0 chr1 2938879 . A . PASS END=2938956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,532:0,40,255:19,0 chr1 2938957 . A . PASS END=2938957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 2938958 . G . PASS END=2938961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 2938962 . G . PASS END=2938964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2938965 . C . PASS END=2938965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 2938966 . T . PASS END=2938966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 2938967 . G . PASS END=2939000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:18:0,47,698:0,47,255:19,0 chr1 2939001 . A . PASS END=2939001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 2939002 . G . PASS END=2939046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 2939047 . C . PASS END=2939048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 2939049 . C . PASS END=2939067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 2939068 . G . PASS END=2939071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 2939072 . C . PASS END=2939089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,629:0,43,255:19,0 chr1 2939090 . C . PASS END=2939105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:22,0 chr1 2939106 . A . PASS END=2939107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 2939108 . G . PASS END=2939109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 2939110 . G . PASS END=2939110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 2939111 . T . PASS END=2939114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 2939115 . A . PASS END=2939115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:20,0 chr1 2939116 . C . PASS END=2939126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 2939127 . A . PASS END=2939127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 2939128 . A . PASS END=2939129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2939130 . A . PASS END=2939130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 2939131 . T . PASS END=2939132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2939133 . C . PASS END=2939133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 2939134 . T . PASS END=2939135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2939136 . T . PASS END=2939136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 2939137 . T . PASS END=2939138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 2939139 . G . PASS END=2939143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 2939144 . G . PASS END=2939144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 2939145 . A . PASS END=2939145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,652:0,11,255:19,0 chr1 2939146 . T . PASS END=2939147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 2939148 . G . PASS END=2939156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 2939157 . G . PASS END=2939157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 2939158 . G . PASS END=2939165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 2939166 . A . PASS END=2939166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 2939167 . C . PASS END=2939176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 2939177 . C . PASS END=2939195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:20:0,52,792:0,52,255:19,0 chr1 2939196 . C . PASS END=2939218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:22,0 chr1 2939219 . C . PASS END=2939219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 2939220 . T . PASS END=2939222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2939223 . A . PASS END=2939223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 2939224 . A . PASS END=2939256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,937:0,62,255:25,0 chr1 2939257 . A . PASS END=2939257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 2939258 . C . PASS END=2939269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 2939270 . C . PASS END=2939270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 2939271 . A . PASS END=2939276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 2939277 . A . PASS END=2939277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 2939278 . T . PASS END=2939316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 2939317 . A . PASS END=2939317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:23,0 chr1 2939318 . G . PASS END=2939338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,858:0,61,255:25,0 chr1 2939339 . C . PASS END=2939340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,807:0,55,255:22,0 chr1 2939341 . T . PASS END=2939342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 2939343 . A . PASS END=2939343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 2939344 . A . PASS END=2939348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:23,0 chr1 2939349 . T . PASS END=2939349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:22,0 chr1 2939350 . T . PASS END=2939354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 2939355 . A . PASS END=2939355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 2939356 . C . PASS END=2939358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 2939359 . C . PASS END=2939359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 2939360 . C . PASS END=2939371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 2939372 . A . PASS END=2939372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,679:0,52,255:20,0 chr1 2939373 . A . PASS END=2939374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 2939375 . A . PASS END=2939383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,745:0,49,255:20,0 chr1 2939384 . A . PASS END=2939384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:18,0 chr1 2985824 . A . PASS END=2985824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 2985825 . T . PASS END=2985854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,43,255:18,0 chr1 2985855 . C . PASS END=2985856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:13,0 chr1 2985857 . A . PASS END=2985860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:17:0,24,360:0,51,255:9,0 chr1 3102675 . G . PASS END=3102675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 3102689 . G . PASS END=3102705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 3102706 . A . PASS END=3102706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:22,0 chr1 3102707 . A . PASS END=3102723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,769:0,65,255:26,0 chr1 3102724 . A . PASS END=3102734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:29,0 chr1 3102735 . G . PASS END=3102735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 3102736 . C . PASS END=3102771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1080:0,80,255:33,0 chr1 3102772 . A . PASS END=3102772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 3102773 . G . PASS END=3102773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 3102774 . T . PASS END=3102806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 3102807 . C . PASS END=3102807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 3102808 . C . PASS END=3102811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 3102812 . T . PASS END=3102812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 3102813 . C . PASS END=3102837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,815:0,69,255:23,0 chr1 3102838 . A . PASS END=3102838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 3102839 . A . PASS END=3102847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,845:0,69,255:23,0 chr1 3102848 . C . PASS END=3102849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 3102850 . C . PASS END=3102863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr1 3102864 . T . PASS END=3102864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 3102865 . G . PASS END=3102880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,892:0,61,255:21,0 chr1 3102881 . A . PASS END=3102883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 3102884 . T . PASS END=3102888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3102889 . A . PASS END=3102889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 3102890 . T . PASS END=3102891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3102892 . C . PASS END=3102892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 3102893 . C . PASS END=3102900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 3102901 . T . PASS END=3102901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,621:0,43,255:19,0 chr1 3102902 . T . PASS END=3102902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 3102903 . C . PASS END=3102906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3102907 . C . PASS END=3102926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,884:0,66,255:24,0 chr1 3102927 . A . PASS END=3102927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr1 3102928 . G . PASS END=3102934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr1 3102935 . G . PASS END=3102939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 3102940 . G . PASS END=3102960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,892:0,61,255:26,0 chr1 3102961 . A . PASS END=3102961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 3102962 . T . PASS END=3102968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 3102969 . C . PASS END=3102969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 3102970 . G . PASS END=3102974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 3102975 . G . PASS END=3102975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 3102976 . A . PASS END=3102991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:23,0 chr1 3102992 . T . PASS END=3102994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 3102995 . T . PASS END=3102996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 3102997 . G . PASS END=3103013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 3103014 . A . PASS END=3103014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:16,0 chr1 3103015 . A . PASS END=3103038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:17,0 chr1 3103044 . C . PASS END=3103044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 3160651 . C . PASS END=3160701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,112,1755:0,112,255:40,0 chr1 3301713 . C . PASS END=3301720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr1 3301721 . C T, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.209;ReadPosRankSum=4.744;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,29,0:0.547,0.000:53:12,9,0:12,20,0:48:85,0,49,1029,829,1858:255,0,255:23,0:5.0000e+01,6.9893e-05,5.2159e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,21,8:9,15,11,18 chr1 3301722 . G . PASS END=3301758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:91:53:0,91,1800:0,91,255:40,0 chr1 3301759 . A . PASS END=3301846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1215:0,93,255:40,0 chr1 3301847 . G . PASS END=3301850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 3303240 . A . PASS END=3303260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:38:0,83,1275:0,83,255:38,0 chr1 3313045 . T . PASS END=3313045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3313055 . A . PASS END=3313058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,812:0,62,255:26,0 chr1 3313059 . A . PASS END=3313069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1163:0,84,255:30,0 chr1 3313070 . A . PASS END=3313070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 3313071 . T . PASS END=3313088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1081:0,80,255:34,0 chr1 3313089 . G . PASS END=3313089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr1 3313090 . T . PASS END=3313095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1296:0,105,255:36,0 chr1 3313096 . G . PASS END=3313096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 3313097 . C . PASS END=3313152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1215:0,80,255:36,0 chr1 3313153 . G . PASS END=3313157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:25,0 chr1 3319355 . A . PASS END=3319382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:26,0 chr1 3319383 . T . PASS END=3319383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 3319384 . G . PASS END=3319384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr1 3319385 . A . PASS END=3319392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr1 3319393 . T . PASS END=3319393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 3319394 . T . PASS END=3319421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:30,0 chr1 3319422 . T . PASS END=3319424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 3319425 . G . PASS END=3319425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 3319426 . A . PASS END=3319432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 3319433 . C . PASS END=3319434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3319435 . T . PASS END=3319438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 3319439 . G . PASS END=3319439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 3319440 . C . PASS END=3319464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,68,255:26,0 chr1 3319465 . G . PASS END=3319465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 3319466 . G . PASS END=3319475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 3319476 . G . PASS END=3319499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:16:0,42,630:0,48,255:21,0 chr1 3319500 . C . PASS END=3319500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 3319501 . G . PASS END=3319527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 3319528 . A . PASS END=3319541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 3319542 . G . PASS END=3319548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 3319549 . C . PASS END=3319549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 3319550 . C . PASS END=3319552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 3319553 . A . PASS END=3319553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr1 3319554 . C . PASS END=3319562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 3321299 . G . PASS END=3321299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 3321303 . C . PASS END=3321450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:37:0,81,1179:0,86,255:40,0 chr1 3321456 . C . PASS END=3321456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 3322059 . G . PASS END=3322066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 3322067 . G . PASS END=3322067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 3322068 . G . PASS END=3322074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,653:0,54,255:18,0 chr1 3322075 . G . PASS END=3322075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 3322076 . C . PASS END=3322105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:19,0 chr1 3322106 . C . PASS END=3322167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,853:0,62,255:24,0 chr1 3322168 . T . PASS END=3322168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 3322169 . C . PASS END=3322176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3322177 . A . PASS END=3322189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,44,255:19,0 chr1 3322190 . C . PASS END=3322192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 3322193 . C . PASS END=3322194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 3322195 . C . PASS END=3322206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr1 3322207 . T . PASS END=3322210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:13:0,26,405:0,26,255:9,0 chr1 3322211 . A . PASS END=3322212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 3327938 . G . PASS END=3327938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 3327948 . G . PASS END=3327953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 3327954 . T . PASS END=3327954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:15,0 chr1 3327955 . C . PASS END=3327965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:19,0 chr1 3327966 . C . PASS END=3327986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:24,0 chr1 3327987 . T . PASS END=3327987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:22,0 chr1 3327988 . G . PASS END=3328017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,886:0,64,255:26,0 chr1 3328018 . C . PASS END=3328024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 3328025 . C . PASS END=3328029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 3328030 . C . PASS END=3328030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 3328031 . A . PASS END=3328049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,947:0,64,255:25,0 chr1 3328050 . A . PASS END=3328050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 3328051 . G . PASS END=3328082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,847:0,69,255:25,0 chr1 3328083 . A . PASS END=3328083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:23,0 chr1 3328084 . C . PASS END=3328090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr1 3328091 . T . PASS END=3328091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 3328092 . T . PASS END=3328097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 3328098 . A . PASS END=3328100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:41:23:0,41,828:0,41,255:20,0 chr1 3328101 . G . PASS END=3328102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 3328103 . A . PASS END=3328105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 3328106 . A . PASS END=3328106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,737:0,25,255:17,0 chr1 3328107 . A . PASS END=3328110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:21:0,51,765:0,56,255:18,0 chr1 3328111 . T . PASS END=3328111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:15,0 chr1 3328112 . T . PASS END=3328158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 3328159 . C . PASS END=3328159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 3328160 . C . PASS END=3328162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 3328163 . A . PASS END=3328163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 3328164 . T . PASS END=3328165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 3328166 . A . PASS END=3328175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,503:0,31,255:13,0 chr1 3328176 . C . PASS END=3328176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 3328177 . A . PASS END=3328177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,405:0,39,255:13,0 chr1 3328178 . A . PASS END=3328178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 3328179 . A . PASS END=3328179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 3328180 . A . PASS END=3328180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 3328181 . C . PASS END=3328212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 3328213 . C . PASS END=3328213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr1 3328214 . T . PASS END=3328215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 3328216 . C . PASS END=3328216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 3328217 . A . PASS END=3328217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 3328218 . A . PASS END=3328218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 3328219 . C . PASS END=3328219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 3328220 . G . PASS END=3328229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 3328230 . C . PASS END=3328230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 3328231 . C . PASS END=3328232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 3328233 . C . PASS END=3328233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 3328234 . C . PASS END=3328253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 3328254 . T . PASS END=3328254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 3328255 . G . PASS END=3328261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 3328262 . T . PASS END=3328262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 3328263 . C . PASS END=3328281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,411:0,36,255:12,0 chr1 3328282 . C . PASS END=3328290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,405:0,20,255:9,0 chr1 3328291 . C . PASS END=3328291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 3328292 . A . PASS END=3328293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 3328294 . C . PASS END=3328294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 3328295 . C . PASS END=3328297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 3328298 . G . PASS END=3328298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 3328299 . G . PASS END=3328305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 3328306 . G . LowGQ END=3328306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:6,0 chr1 3328307 . G . PASS END=3328320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr1 3328321 . A . PASS END=3328328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 3328329 . A . PASS END=3328329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 3328330 . C . PASS END=3328340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 3328341 . C . PASS END=3328344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 3328345 . G . PASS END=3328347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 3328348 . A . PASS END=3328348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 3328349 . C . PASS END=3328349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 3328350 . C . PASS END=3328357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 3328358 . T C, 86.13 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,7,0:0,6,0:36:124,39,0,503,39,503:255,39,0:0,0:8.6127e+01,3.6127e+01,1.0599e-03,4.5000e+02,7.0897e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,5:0,0,6,7 chr1 3328359 . C . PASS END=3328360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 3328361 . C . PASS END=3328361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 3328362 . T . PASS END=3328366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 3328367 . A . PASS END=3328367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 3328368 . A . PASS END=3328368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3328369 . G . PASS END=3328369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 3328370 . A . PASS END=3328371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3328372 . C . PASS END=3328372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 3328373 . C . PASS END=3328373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 3328374 . C . PASS END=3328379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 3328380 . A . PASS END=3328380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 3328381 . C . PASS END=3328388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 3328389 . A . PASS END=3328389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 3328390 . G . PASS END=3328395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:15,0 chr1 3328396 . C . PASS END=3328434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,543:0,43,255:19,0 chr1 3328435 . G . PASS END=3328435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:18,0 chr1 3328436 . G . PASS END=3328450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr1 3328451 . A . PASS END=3328451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 3328452 . A . PASS END=3328453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 3328454 . A . PASS END=3328454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 3328455 . G . PASS END=3328455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 3328456 . C . PASS END=3328456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 3328457 . A . PASS END=3328473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:21,0 chr1 3328474 . A . PASS END=3328474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 3328475 . G . PASS END=3328477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3328478 . G . PASS END=3328478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 3328479 . C . PASS END=3328481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 3328482 . G . PASS END=3328482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 3328483 . G . PASS END=3328491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 3328492 . G . PASS END=3328494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,859:0,56,255:23,0 chr1 3328495 . G . PASS END=3328495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3328496 . T . PASS END=3328496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 3328497 . T . PASS END=3328497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 3328498 . C . PASS END=3328498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 3328499 . G . PASS END=3328500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3328501 . G . PASS END=3328501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr1 3328502 . A . PASS END=3328505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 3328506 . G . PASS END=3328506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:23,0 chr1 3328507 . C . PASS END=3328515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,969:0,65,255:26,0 chr1 3328516 . C . PASS END=3328518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3328519 . C . PASS END=3328519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,76,255:24,0 chr1 3328520 . T . PASS END=3328520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1023:0,51,255:24,0 chr1 3328521 . G . PASS END=3328535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:27:0,70,946:0,70,255:26,0 chr1 3328536 . A . PASS END=3328536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr1 3328537 . G . PASS END=3328538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,987:0,73,255:26,0 chr1 3328539 . C . PASS END=3328552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 3328553 . A . PASS END=3328553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 3328554 . T . PASS END=3328556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 3328557 . C . PASS END=3328557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 3328558 . G . PASS END=3328562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3328563 . G . PASS END=3328563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 3328564 . C . PASS END=3328566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3328567 . T . PASS END=3328567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:26,0 chr1 3328568 . G . PASS END=3328568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 3328569 . A . PASS END=3328569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 3328570 . C . PASS END=3328594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1090:0,80,255:31,0 chr1 3328595 . G . PASS END=3328595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 3328596 . G . PASS END=3328652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1172:0,85,255:33,0 chr1 3328653 . G . PASS END=3328653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:31,0 chr1 3328654 . C . PASS END=3328663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:31,0 chr1 3328664 . A . PASS END=3328666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:26,0 chr1 3328667 . G . PASS END=3328667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 3328668 . A . PASS END=3328671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,1080:0,60,255:25,0 chr1 3328672 . G . PASS END=3328674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 3328675 . C . PASS END=3328675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:27,0 chr1 3328676 . A . PASS END=3328728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,908:0,61,255:26,0 chr1 3328729 . G . LowGQ END=3328729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,806:2,0,255:23,0 chr1 3328730 . G . PASS END=3328732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr1 3328733 . G . PASS END=3328750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,930:0,62,255:25,0 chr1 3328751 . G . PASS END=3328751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:20,0 chr1 3328752 . A . PASS END=3328752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3328753 . G . PASS END=3328753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 3328754 . G . PASS END=3328756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3328757 . C . PASS END=3328762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,674:0,46,255:20,0 chr1 3328763 . T . PASS END=3328763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:19,0 chr1 3328764 . T . PASS END=3328775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,765:0,50,255:19,0 chr1 3328776 . A . PASS END=3328815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 3328816 . A . PASS END=3328816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 3328817 . A . PASS END=3328844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:23,0 chr1 3328845 . C . PASS END=3328845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 3328846 . C . PASS END=3328860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 3328861 . C . PASS END=3328861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 3328862 . G . PASS END=3328870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3328871 . T . PASS END=3328885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,46,255:17,0 chr1 3328886 . A . PASS END=3328886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 3328887 . T . PASS END=3328898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,643:0,51,255:17,0 chr1 3328899 . A . PASS END=3328899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 3328900 . G . PASS END=3328901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 3328902 . A . PASS END=3328902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 3328903 . G . PASS END=3328915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,578:0,54,255:18,0 chr1 3328916 . C . PASS END=3328917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 3328918 . C . PASS END=3328959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,558:0,45,255:16,0 chr1 3328960 . C . PASS END=3328960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 3328961 . C . PASS END=3328963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3328964 . C . PASS END=3328970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 3328971 . T . PASS END=3328981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr1 3328982 . A . PASS END=3328984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 3328985 . G . PASS END=3329006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:17,0 chr1 3329007 . T . PASS END=3329007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 3329008 . G . PASS END=3329047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 3329048 . A . PASS END=3329048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 3329049 . A . PASS END=3329103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,582:0,48,255:19,0 chr1 3329104 . C . PASS END=3329108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 3329109 . A . PASS END=3329188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,621:0,41,255:19,0 chr1 3329189 . C . PASS END=3329189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 3329190 . G . PASS END=3329195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 3329196 . G . PASS END=3329196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 3329197 . T . PASS END=3329204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 3329205 . A . PASS END=3329205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 3329206 . A . PASS END=3329212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 3329213 . G . PASS END=3329214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 3329215 . C . PASS END=3329236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 3329237 . C . PASS END=3329237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 3329238 . A . PASS END=3329250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,451:0,39,255:13,0 chr1 3329251 . A . PASS END=3329255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 3329256 . A . PASS END=3329256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 3329257 . G . PASS END=3329257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 3329258 . C . PASS END=3329258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 3329259 . T . PASS END=3329259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 3329260 . G . PASS END=3329264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 3329265 . C . PASS END=3329268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 3329269 . C . PASS END=3329269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 3329270 . G . PASS END=3329275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 3329276 . C . PASS END=3329281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr1 3329282 . C . PASS END=3329282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 3329283 . A . PASS END=3329286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 3329287 . G . PASS END=3329287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 3329288 . T . PASS END=3329300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,243:0,24,243:8,0 chr1 3329301 . T . PASS END=3329302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 3329303 . C . PASS END=3329303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:5,0 chr1 3329304 . C . PASS END=3329334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,149:0,15,149:6,0 chr1 3329335 . C . LowGQ END=3329335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 3329336 . T . PASS END=3329359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:5,0 chr1 3329360 . T . PASS END=3329364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr1 3331123 . G . PASS END=3331126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1047:0,71,255:26,0 chr1 3331127 . G . PASS END=3331138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:29,0 chr1 3331139 . G . PASS END=3331139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 3331140 . A . PASS END=3331165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr1 3331166 . G . PASS END=3331172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 3331173 . A . PASS END=3331173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:24,0 chr1 3331174 . A . PASS END=3331177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 3331178 . C . PASS END=3331180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3331181 . G . PASS END=3331210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 3331211 . G . PASS END=3331211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 3331215 . C . PASS END=3331216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 3334392 . A . PASS END=3334405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 3334406 . G . PASS END=3334410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,722:0,63,255:23,0 chr1 3334411 . T . PASS END=3334411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 3334412 . G . PASS END=3334431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,831:0,69,255:25,0 chr1 3334432 . T . PASS END=3334432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 3334433 . T . PASS END=3334437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 3334438 . C . PASS END=3334438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 3334439 . C . PASS END=3334462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,894:0,62,255:25,0 chr1 3334463 . C . PASS END=3334463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 3334464 . C . PASS END=3334471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,922:0,62,255:23,0 chr1 3334472 . C . PASS END=3334472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 3334473 . C . PASS END=3334477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 3334478 . C . PASS END=3334479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 3334480 . A . PASS END=3334483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 3334484 . C . PASS END=3334485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,831:0,55,255:21,0 chr1 3334486 . C . PASS END=3334491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 3334492 . A . PASS END=3334492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 3334493 . C . PASS END=3334493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3334494 . T . PASS END=3334496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,715:0,49,255:22,0 chr1 3334497 . C . PASS END=3334497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 3334498 . G . PASS END=3334499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 3334500 . T . PASS END=3334500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3334501 . C . PASS END=3334501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 3334502 . C . PASS END=3334502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3334503 . C . PASS END=3334503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 3334504 . C . PASS END=3334513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 3334514 . G . PASS END=3334514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,709:0,19,255:19,0 chr1 3334515 . C . PASS END=3334515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:20,0 chr1 3334516 . T . PASS END=3334516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,719:0,33,255:19,0 chr1 3334517 . C . PASS END=3334520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 3334521 . G . PASS END=3334521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:19,0 chr1 3334522 . A . PASS END=3334522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 3334523 . C . PASS END=3334523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr1 3334524 . C . PASS END=3334525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 3334526 . C . PASS END=3334530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 3334531 . T . PASS END=3334531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:18,0 chr1 3334532 . C . PASS END=3334532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 3334533 . A . PASS END=3334533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr1 3334534 . G . PASS END=3334553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,584:0,40,255:18,0 chr1 3334554 . A . PASS END=3334554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 3334555 . C . PASS END=3334555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 3334556 . G . PASS END=3334557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,566:0,34,255:16,0 chr1 3334558 . G . PASS END=3334558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 3334559 . C . PASS END=3334559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 3334560 . A . PASS END=3334561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 3335231 . G . PASS END=3335231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 3335232 . T . PASS END=3335232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 3335233 . A . PASS END=3335240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,823:0,69,255:25,0 chr1 3335241 . A . PASS END=3335241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:24,0 chr1 3335242 . A . PASS END=3335243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 3335244 . A . PASS END=3335244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3335245 . T . PASS END=3335245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,776:0,34,255:25,0 chr1 3335246 . C . PASS END=3335246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 3335247 . T . PASS END=3335248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 3335249 . C . PASS END=3335249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:27,0 chr1 3335250 . C . PASS END=3335252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 3335253 . A . PASS END=3335254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:28,0 chr1 3335255 . A . PASS END=3335263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 3335264 . T . PASS END=3335264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,940:0,38,255:28,0 chr1 3335265 . C . PASS END=3335265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 3335266 . T . PASS END=3335277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1066:0,93,255:31,0 chr1 3335278 . T . PASS END=3335278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 3335279 . G . PASS END=3335285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 3335286 . C . PASS END=3335286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 3335287 . A . PASS END=3335295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 3335296 . A . PASS END=3335296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr1 3335297 . G . PASS END=3335300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3335301 . C . PASS END=3335308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3342145 . G . PASS END=3342156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:31,0 chr1 3342157 . C T, 47.54 PASS DP=32;MQ=250.00;MQRankSum=4.719;ReadPosRankSum=2.724;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,13,0:0.406,0.000:32:9,6,0:10,7,0:46:82,0,50,465,672,1136:255,0,255:19,0:4.7543e+01,9.8109e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,9,4:6,13,4,9 chr1 3342158 . G . PASS END=3342194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:31:0,89,1162:0,89,255:35,0 chr1 3342195 . A . PASS END=3342288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:31:0,87,1305:0,91,255:40,0 chr1 3342289 . G . PASS END=3342314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,900:0,61,255:26,0 chr1 3342615 . T . PASS END=3342652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1030:0,82,255:35,0 chr1 3342653 . A . PASS END=3342653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:31,0 chr1 3342654 . C . PASS END=3342654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:31,0 chr1 3342655 . C . PASS END=3342655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:30,0 chr1 3342656 . A . PASS END=3342699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1159:0,87,255:37,0 chr1 3342700 . A . PASS END=3342700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr1 3342701 . G . PASS END=3342701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1349:0,95,255:35,0 chr1 3342702 . A . PASS END=3342702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1091:0,55,255:34,0 chr1 3342703 . C . PASS END=3342710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1289:0,97,255:37,0 chr1 3342711 . A . PASS END=3342711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:35,0 chr1 3342712 . A . PASS END=3342766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,81,255:39,0 chr1 3342767 . G . PASS END=3342776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,86,255:31,0 chr1 3342777 . G . PASS END=3342786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 3342787 . A . PASS END=3342789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 3347436 . G . PASS END=3347458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,592:0,51,255:19,0 chr1 3347459 . G . PASS END=3347461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 3347462 . G . PASS END=3347462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 3347463 . T . PASS END=3347469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr1 3347470 . T . PASS END=3347470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 3347471 . G . PASS END=3347474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 3347475 . A . PASS END=3347475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 3347476 . G . PASS END=3347478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3347479 . C . PASS END=3347480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 3347481 . A . PASS END=3347491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 3347492 . A . PASS END=3347492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:28,0 chr1 3347493 . G . PASS END=3347534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1172:0,83,255:32,0 chr1 3347535 . G . PASS END=3347535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 3347536 . G . PASS END=3347551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr1 3347552 . T . PASS END=3347576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 3347577 . C . PASS END=3347577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,1 chr1 3347578 . G . PASS END=3347579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,835:0,33,255:21,1 chr1 3347580 . G . PASS END=3347582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 3347583 . C . PASS END=3347583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:21,0 chr1 3347584 . C . PASS END=3347592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr1 3347593 . G . PASS END=3347595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 3347596 . C . PASS END=3347601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 3347602 . G . PASS END=3347613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 3347614 . G . PASS END=3347614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:14,0 chr1 3347615 . A . PASS END=3347620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 3347621 . A . PASS END=3347621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr1 3347622 . G . PASS END=3347663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 3347664 . C . PASS END=3347672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 3348530 . G . PASS END=3348533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,729:0,47,255:19,0 chr1 3348534 . G . PASS END=3348548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,848:0,66,255:24,0 chr1 3348549 . G . PASS END=3348549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 3348550 . G . PASS END=3348555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:26,0 chr1 3348556 . T . PASS END=3348557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 3348558 . T . PASS END=3348558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 3348559 . T . PASS END=3348579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,934:0,81,255:29,0 chr1 3348580 . C . PASS END=3348580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 3348581 . T . PASS END=3348589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 3348590 . G . PASS END=3348590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 3348591 . G . PASS END=3348681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1203:0,88,255:37,0 chr1 3348682 . T . PASS END=3348704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 3350241 . G . PASS END=3350242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 3350243 . A . PASS END=3350243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 3350244 . T . PASS END=3350370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:31:0,80,1169:0,80,255:40,0 chr1 3350371 . T . PASS END=3350371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1268:0,72,255:28,0 chr1 3350372 . C . PASS END=3350372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:27,0 chr1 3350373 . T . PASS END=3350373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 3350374 . G . PASS END=3350375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,1170:0,66,255:28,0 chr1 3350389 . C . PASS END=3350389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 3376064 . A . PASS END=3376095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,116,1544:0,116,255:40,0 chr1 3379630 . G . PASS END=3379708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1260:0,93,255:39,0 chr1 3379709 . T . PASS END=3379709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 3379710 . C . PASS END=3379712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 3379713 . A . PASS END=3379713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 3379714 . G . PASS END=3379735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr1 3379736 . A . PASS END=3379736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 3379737 . A . PASS END=3379737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3379738 . C . PASS END=3379739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,1061:0,60,255:28,0 chr1 3379740 . C . PASS END=3379742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3379743 . C . PASS END=3379744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 3379745 . T . PASS END=3379749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 3379750 . G . PASS END=3379750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 3379751 . C . PASS END=3379753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3379754 . C . PASS END=3379755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 3379756 . A . PASS END=3379758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 3379759 . G . PASS END=3379759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 3379760 . G . PASS END=3379760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 3379761 . T . PASS END=3379761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1147:0,44,255:27,0 chr1 3379762 . C . PASS END=3379770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1178:0,83,255:29,0 chr1 3379771 . C . PASS END=3379771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 3379772 . C . PASS END=3379772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 3379773 . C . PASS END=3379801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,1008:0,68,255:26,0 chr1 3379802 . C . PASS END=3379802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 3379803 . C . PASS END=3379806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 3379807 . G . PASS END=3379807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 3379808 . G . PASS END=3379810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 3379811 . C . PASS END=3379811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 3379812 . C . PASS END=3379813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3379814 . G . PASS END=3379814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 3379815 . C . PASS END=3379820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 3379821 . C . PASS END=3379865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:19,0 chr1 3379866 . T . PASS END=3379869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,557:0,32,255:13,0 chr1 3379870 . C . PASS END=3379873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 3379874 . G . PASS END=3379883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 3379884 . C . PASS END=3379884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 3379885 . G . PASS END=3379886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 3379887 . C . PASS END=3379889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3379890 . T . PASS END=3379897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 3379898 . G . PASS END=3379908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:26:12:0,26,405:0,26,255:9,0 chr1 3379909 . G . PASS END=3379925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 3379926 . T . PASS END=3379955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,250:0,24,250:9,0 chr1 3379956 . C . PASS END=3379956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 3379957 . C . PASS END=3379967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 3379968 . G . PASS END=3379970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 3379971 . T . PASS END=3379971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 3379972 . C . PASS END=3380010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:13,0 chr1 3380011 . C . PASS END=3380050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr1 3380051 . A . PASS END=3380051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 3380052 . T . PASS END=3380052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 3380053 . G . PASS END=3380053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 3380054 . G . PASS END=3380124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,621:0,40,255:18,0 chr1 3380125 . G . PASS END=3380125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 3380126 . G . PASS END=3380127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 3380128 . C . PASS END=3380128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 3380129 . C . PASS END=3380154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 3380155 . T . PASS END=3380155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 3380156 . G . PASS END=3380166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr1 3380167 . A . PASS END=3380167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 3380168 . A . PASS END=3380174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 3380175 . A . PASS END=3380175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 3380176 . G . PASS END=3380202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 3380203 . C . PASS END=3380234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,488:0,39,255:13,0 chr1 3380235 . A . PASS END=3380235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,417:0,23,255:11,0 chr1 3380236 . G . PASS END=3380236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3382712 . A . PASS END=3382757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,103,1362:0,103,255:40,0 chr1 3383732 . A . PASS END=3383732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr1 3383733 . C . PASS END=3383738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 3383739 . G . PASS END=3383751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:15,0 chr1 3383752 . A . PASS END=3383752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 3383753 . T . PASS END=3383759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr1 3383760 . G . PASS END=3383760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 3383761 . C . PASS END=3383799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:19,0 chr1 3383800 . C . PASS END=3383808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 3383809 . T . PASS END=3383834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,690:0,57,255:19,0 chr1 3383835 . G . PASS END=3383840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 3383841 . C . PASS END=3383857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:17,0 chr1 3383858 . A . PASS END=3383858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr1 3383859 . G . PASS END=3383860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 3383861 . G . PASS END=3383863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 3383864 . A . PASS END=3383871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:12,0 chr1 3383872 . G . PASS END=3383872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 3383873 . C . PASS END=3383897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 3383898 . A G, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,4,0:0,8,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,9:0,0,9,3 chr1 3383899 . G . PASS END=3383901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 3385444 . G . PASS END=3385500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:38:0,87,1397:0,87,255:40,0 chr1 3385997 . G . PASS END=3386000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 3386001 . T . PASS END=3386001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 3386002 . G . PASS END=3386016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr1 3386017 . G . PASS END=3386017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 3386018 . T . PASS END=3386045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 3386046 . G . PASS END=3386051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:22,0 chr1 3386052 . T . PASS END=3386052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 3386053 . G . PASS END=3386081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,809:0,66,255:23,0 chr1 3386082 . T . PASS END=3386096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,690:0,57,255:19,0 chr1 3386097 . C . PASS END=3386097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 3386098 . C . PASS END=3386120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:18,0 chr1 3386121 . T . PASS END=3386157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:31:13:0,31,393:0,31,255:13,0 chr1 3388222 . A . PASS END=3388231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr1 3388232 . C . PASS END=3388232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 3388233 . T . PASS END=3388268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 3388269 . G A, 48.90 PASS DP=8;MQ=250.00;MQRankSum=1.920;ReadPosRankSum=1.920;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,3,0:0.375,0.000:8:3,3,0:2,0,0:47:84,0,50,107,179,286:92,0,170:4,0:4.8901e+01,7.7659e-05,5.3000e+01,1.0731e+02,2.1362e+02,2.8915e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,2,1:1,4,2,1 chr1 3388270 . G . PASS END=3388295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 3388296 . G . PASS END=3388297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 3388298 . G . PASS END=3388299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 3388300 . C . PASS END=3388300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 3388301 . C . PASS END=3388306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 3388307 . A . PASS END=3388320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,250:8,0 chr1 3388321 . A . PASS END=3388327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 3388328 . A . LowGQ END=3388328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,202:7,0,209:5,0 chr1 3388329 . C . PASS END=3388329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 3388330 . T . PASS END=3388330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:4,0 chr1 3388331 . G . PASS END=3388331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr1 3388332 . T . PASS END=3388332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:3,0 chr1 3388333 . C . PASS END=3388344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:4,0 chr1 3388345 . C . PASS END=3388355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,125:3,0 chr1 3389642 . G . PASS END=3389689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1011:0,81,255:40,0 chr1 3389690 . G . PASS END=3389726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:44:0,80,1513:0,80,255:40,0 chr1 3389727 . C T, 182.42 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,21,0:0,24,0:132:220,135,0,1704,135,1704:255,135,0:0,0:1.8242e+02,1.3242e+02,0.0000e+00,4.5000e+02,1.6719e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,21:0,0,24,21 chr1 3389728 . A . PASS END=3389759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1260:0,86,255:38,0 chr1 3389760 . G . PASS END=3389764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 3389765 . C . PASS END=3389778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,931:0,64,255:23,0 chr1 3389779 . C . PASS END=3389787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 3389788 . A . PASS END=3389788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:16,0 chr1 3389789 . G . PASS END=3389794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr1 3389957 . A . PASS END=3389961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 3389962 . G . PASS END=3389962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3389963 . C . PASS END=3389963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:27,0 chr1 3389964 . A . PASS END=3390056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1080:0,87,255:40,0 chr1 3390057 . C . PASS END=3390057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:33,0 chr1 3390058 . G . PASS END=3390082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1115:0,80,255:35,0 chr1 3390083 . G . PASS END=3390086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 3391272 . A . PASS END=3391278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,906:0,72,255:26,0 chr1 3391279 . G . PASS END=3391289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr1 3391290 . C . PASS END=3391290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 3391291 . A . PASS END=3391303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 3391304 . A . PASS END=3391304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 3391305 . A . PASS END=3391342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1063:0,80,255:31,0 chr1 3391343 . C . PASS END=3391346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 3392534 . C . PASS END=3392626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1305:0,108,255:40,0 chr1 3394439 . T . PASS END=3394442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr1 3394443 . T . PASS END=3394443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 3394444 . C . PASS END=3394444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 3394445 . C . PASS END=3394445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 3394446 . C . PASS END=3394455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,697:0,66,255:22,0 chr1 3394456 . T C, 115.29 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,8,0:0,15,0:65:153,68,0,817,68,817:255,69,0:0,0:1.1529e+02,6.5289e+01,1.2943e-06,4.5000e+02,1.0006e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,6:0,0,12,11 chr1 3394457 . G . PASS END=3394477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,856:0,69,255:25,0 chr1 3394478 . C . PASS END=3394478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 3394479 . G . PASS END=3394479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 3394480 . C . PASS END=3394484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:31,0 chr1 3394485 . A . PASS END=3394485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:30,0 chr1 3394486 . G . PASS END=3394493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1196:0,89,255:34,0 chr1 3394494 . T . PASS END=3394519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1158:0,88,255:36,0 chr1 3394520 . A . PASS END=3394520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1176:0,77,255:34,0 chr1 3394521 . A . PASS END=3394547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1278:0,89,255:35,0 chr1 3394548 . T . PASS END=3394548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1184:0,72,255:28,0 chr1 3394549 . T . PASS END=3394556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1305:0,90,255:30,0 chr1 3394557 . T . PASS END=3394557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 3394558 . C . PASS END=3394559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3394560 . A . PASS END=3394560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 3394561 . C . PASS END=3394562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3394563 . A . PASS END=3394574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,68,255:26,0 chr1 3394575 . T . PASS END=3394575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 3394576 . G . PASS END=3394588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 3394589 . A . PASS END=3394589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 3394590 . G . PASS END=3394590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 3394988 . C . PASS END=3395000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 3395001 . A . PASS END=3395001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 3395002 . T . PASS END=3395002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 3395003 . G . PASS END=3395003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 3395004 . G . PASS END=3395025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:25,0 chr1 3395026 . A . PASS END=3395027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 3395028 . C . PASS END=3395031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1030:0,68,255:26,0 chr1 3395032 . T . PASS END=3395038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3395039 . G A, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,15,0:0,12,0:78:166,81,0,1047,81,1047:255,81,0:0,0:1.2826e+02,7.8263e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,15:0,0,12,15 chr1 3395040 . G . PASS END=3395057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr1 3395058 . G . PASS END=3395058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 3395059 . A . PASS END=3395076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:29,0 chr1 3395077 . G . PASS END=3395077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 3395078 . C . PASS END=3395083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 3395084 . C . PASS END=3395090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 3395091 . T . PASS END=3395091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 3395092 . C . PASS END=3395114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,90,255:31,0 chr1 3395115 . G . PASS END=3395126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 3395127 . C . PASS END=3395128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3395129 . C . PASS END=3395141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 3395142 . C . PASS END=3395172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 3395173 . C . PASS END=3395176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 3396081 . G . PASS END=3396083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 3396084 . T . PASS END=3396084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 3396085 . G . PASS END=3396107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:25,0 chr1 3396108 . G . PASS END=3396108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 3396109 . C . PASS END=3396115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 3396116 . A . PASS END=3396117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,800:0,55,255:22,0 chr1 3396118 . A . PASS END=3396129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,828:0,62,255:26,0 chr1 3396130 . T . PASS END=3396135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 3396136 . G . PASS END=3396136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 3396137 . G . PASS END=3396154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 3396376 . A . PASS END=3396390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:25,0 chr1 3396391 . A . PASS END=3396391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 3396392 . G . PASS END=3396407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,925:0,72,255:25,0 chr1 3396408 . T . PASS END=3396408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 3396409 . T . PASS END=3396434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,947:0,75,255:25,0 chr1 3396435 . C . PASS END=3396435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 3396436 . T . PASS END=3396467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:23,0 chr1 3396468 . C . PASS END=3396477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 3397012 . G . PASS END=3397012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3397013 . G . PASS END=3397013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 3397014 . T . PASS END=3397017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 3397018 . T . PASS END=3397018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 3397019 . C . PASS END=3397020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 3397021 . A . PASS END=3397027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 3397028 . G . PASS END=3397028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 3397029 . A . PASS END=3397032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 3397033 . T . PASS END=3397036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3397037 . G . PASS END=3397037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr1 3397038 . G . PASS END=3397039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr1 3397040 . C . PASS END=3397040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 3397041 . G . PASS END=3397042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 3397043 . A . PASS END=3397043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 3397044 . G . PASS END=3397046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr1 3397047 . A . PASS END=3397047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,443:0,18,255:15,0 chr1 3397048 . C . PASS END=3397048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 3397049 . G . PASS END=3397050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 3397051 . G . PASS END=3397051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 3397052 . A . PASS END=3397052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:15,0 chr1 3397053 . T . PASS END=3397110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,607:0,40,255:18,0 chr1 3397111 . T . PASS END=3397111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr1 3397112 . C . PASS END=3397129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 3397130 . G . PASS END=3397148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 3397149 . T . PASS END=3397150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 3397151 . G . PASS END=3397151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 3407092 . C . PASS END=3407143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,96,255:37,0 chr1 3407144 . A . PASS END=3407152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:29:0,77,1116:0,77,255:26,0 chr1 3407153 . G . PASS END=3407153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:25,0 chr1 3407476 . C . PASS END=3407488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1050:0,82,255:33,0 chr1 3407489 . T . PASS END=3407489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1130:0,52,255:29,0 chr1 3407490 . A . PASS END=3407516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1237:0,98,255:37,0 chr1 3407517 . G . PASS END=3407517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 3407518 . G . PASS END=3407523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1333:0,95,255:37,0 chr1 3409203 . C . PASS END=3409207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 3409208 . C . PASS END=3409208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 3409209 . G . PASS END=3409217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 3409218 . G . PASS END=3409218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 3409219 . C . PASS END=3409219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 3409220 . C . PASS END=3409220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 3409221 . C . PASS END=3409227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 3409228 . G . PASS END=3409228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 3409229 . C . PASS END=3409229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 3409230 . C . PASS END=3409230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 3409231 . A . PASS END=3409237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 3409238 . C . PASS END=3409246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 3409247 . T . PASS END=3409247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 3409248 . G . PASS END=3409251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 3409252 . A . PASS END=3409252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 3409253 . C . PASS END=3409259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3409260 . G . PASS END=3409260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 3409261 . G . PASS END=3409261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 3409262 . T . PASS END=3409262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 3409263 . C . PASS END=3409266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr1 3409267 . G . PASS END=3409267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 3409268 . T . PASS END=3409268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 3409269 . C . PASS END=3409275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 3409276 . A . PASS END=3409276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 3409277 . C . PASS END=3409277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 3409278 . C . PASS END=3409278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr1 3409279 . C . PASS END=3409283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 3409284 . A . PASS END=3409284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 3409285 . G . PASS END=3409288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3409289 . C . PASS END=3409293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 3409294 . C . PASS END=3409329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:25:9:0,25,304:0,25,255:9,0 chr1 3409330 . A . PASS END=3409330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 3409331 . T . PASS END=3409331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 3410335 . C . PASS END=3410335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 3410336 . C . PASS END=3410336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 3410337 . A . PASS END=3410337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr1 3410338 . G . PASS END=3410342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 3410343 . C . PASS END=3410343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 3410344 . A . PASS END=3410344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 3410345 . G . PASS END=3410346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 3410347 . T . PASS END=3410347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 3410348 . G . PASS END=3410348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 3410349 . G . PASS END=3410349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 3410350 . C . PASS END=3410350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 3410351 . T . PASS END=3410373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:19,0 chr1 3410374 . G . PASS END=3410382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 3410383 . C . PASS END=3410398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,50,255:19,0 chr1 3410399 . G . PASS END=3410402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 3410403 . G . PASS END=3410403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 3410404 . C . PASS END=3410404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 3410405 . C . PASS END=3410405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 3410406 . C . PASS END=3410406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 3410407 . C . PASS END=3410422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:20,0 chr1 3410423 . G . PASS END=3410423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 3410424 . C . PASS END=3410425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 3410426 . C . PASS END=3410426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:17,0 chr1 3410427 . T . PASS END=3410434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr1 3410435 . G . PASS END=3410435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,604:0,2,255:14,0 chr1 3410436 . C . PASS END=3410443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:17,0 chr1 3410444 . A . PASS END=3410444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr1 3410445 . A . PASS END=3410449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 3410450 . A . PASS END=3410451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 3410452 . C . PASS END=3410457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 3410458 . C . PASS END=3410458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 3410459 . A . PASS END=3410462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 3410463 . C . PASS END=3410463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 3410560 . C . PASS END=3410581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr1 3410582 . G . PASS END=3410582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 3410583 . A . PASS END=3410596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr1 3410597 . G . PASS END=3410597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 3410598 . A . PASS END=3410605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,576:0,45,255:16,0 chr1 3410606 . G . PASS END=3410606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 3410607 . C . PASS END=3410625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 3410626 . G . PASS END=3410626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 3410627 . G . PASS END=3410630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 3410631 . C . PASS END=3410631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 3410632 . C . PASS END=3410634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 3410635 . G . PASS END=3410635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 3410636 . T . PASS END=3410637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 3410638 . G . PASS END=3410641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 3410642 . C . PASS END=3410642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 3410643 . C . PASS END=3410648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 3410649 . A . PASS END=3410649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:10,0 chr1 3410650 . A . PASS END=3410664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 3410665 . C . PASS END=3410675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 3410676 . C . PASS END=3410688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:6:0,15,225:0,18,233:6,0 chr1 3410935 . G . PASS END=3410936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1069:0,71,255:27,0 chr1 3410937 . T . PASS END=3410938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3410939 . C . PASS END=3410939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 3410940 . T . PASS END=3410943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 3410944 . A . PASS END=3410944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 3410945 . G . PASS END=3410947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 3410948 . C . PASS END=3410949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 3410950 . G . PASS END=3410950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:28,0 chr1 3410951 . G . PASS END=3410956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr1 3410957 . G . PASS END=3410957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 3410958 . A . PASS END=3410959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3410960 . G . PASS END=3410960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 3410961 . C . PASS END=3410962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 3410963 . G . PASS END=3410966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 3410967 . C . PASS END=3410968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3410969 . G . PASS END=3410969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 3410970 . C . PASS END=3410970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:26,0 chr1 3410971 . A . PASS END=3410971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3410972 . G . PASS END=3410972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 3410973 . C . PASS END=3410973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 3410974 . G . PASS END=3410975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1030:0,68,255:28,0 chr1 3410976 . C . PASS END=3410977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 3410978 . G . PASS END=3410980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:30,0 chr1 3410981 . G . PASS END=3410983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1149:0,80,255:32,0 chr1 3410984 . C . PASS END=3410984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:30,0 chr1 3410985 . G . PASS END=3410985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:31,0 chr1 3410986 . T . PASS END=3410986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 3410987 . G . PASS END=3411032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1188:0,83,255:34,0 chr1 3411033 . C . PASS END=3411033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr1 3411034 . A . PASS END=3411060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,89,255:34,0 chr1 3411061 . A . PASS END=3411063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 3411177 . C . PASS END=3411177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 3411178 . C . PASS END=3411178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3411179 . A . PASS END=3411179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 3411180 . G . PASS END=3411180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3411181 . C . PASS END=3411181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 3411182 . T . PASS END=3411182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 3411183 . C . PASS END=3411183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 3411184 . G . PASS END=3411184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 3411185 . C . PASS END=3411185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 3411186 . A . PASS END=3411186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 3411187 . G . PASS END=3411194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:26,0 chr1 3411195 . C . PASS END=3411195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 3411196 . C . PASS END=3411196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 3411197 . G . PASS END=3411197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 3411198 . T . PASS END=3411198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 3411199 . C . PASS END=3411200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 3411201 . A . PASS END=3411201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 3411202 . G . PASS END=3411204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 3411205 . C . PASS END=3411209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3411210 . C . PASS END=3411212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:25,0 chr1 3411213 . A . PASS END=3411213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:24,0 chr1 3411214 . G . PASS END=3411220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:25,0 chr1 3411221 . C . PASS END=3411221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 3411222 . T . PASS END=3411223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 3411224 . C . PASS END=3411224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 3411225 . C . PASS END=3411228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr1 3411229 . G . PASS END=3411229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 3411230 . C . PASS END=3411248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:25,0 chr1 3411249 . C . PASS END=3411250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 3411251 . T . PASS END=3411254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3411255 . T . PASS END=3411255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 3411256 . G . PASS END=3411258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 3411259 . G . PASS END=3411260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:20,0 chr1 3411261 . A . PASS END=3411261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 3411262 . G . PASS END=3411267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,855:0,56,255:19,0 chr1 3411268 . G . PASS END=3411268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 3411269 . T . PASS END=3411277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:18,0 chr1 3411278 . C . PASS END=3411291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:31:14:0,31,498:0,31,255:13,0 chr1 3411292 . G . PASS END=3411293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3411294 . T . PASS END=3411294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,458:0,6,255:13,0 chr1 3411295 . C . PASS END=3411302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 3411303 . A . PASS END=3411304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 3411305 . C . PASS END=3411305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 3411489 . T . PASS END=3411504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 3411505 . A . PASS END=3411526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,955:0,67,255:26,0 chr1 3412454 . C . PASS END=3412455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 3412456 . C . PASS END=3412456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 3412457 . G . PASS END=3412457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 3412458 . C . PASS END=3412462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 3412463 . A . PASS END=3412463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 3412464 . G . PASS END=3412504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,480:0,42,255:15,0 chr1 3412505 . T . PASS END=3412505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 3412506 . C . PASS END=3412509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 3412510 . G . PASS END=3412513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 3412514 . C . PASS END=3412514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 3412515 . G . PASS END=3412516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 3412517 . A . PASS END=3412517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 3412518 . G . PASS END=3412528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 3412529 . G . PASS END=3412544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,315:0,20,255:9,0 chr1 3412545 . G . PASS END=3412557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:8:0,15,225:0,24,255:6,0 chr1 3412558 . G . PASS END=3412558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 3412559 . G . PASS END=3412582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:5,0 chr1 3413219 . T . PASS END=3413220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1005:0,87,255:29,0 chr1 3413221 . A . PASS END=3413221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:28,0 chr1 3413222 . G . PASS END=3413231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 3413232 . C . PASS END=3413232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 3413233 . G . PASS END=3413264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:33,0 chr1 3413265 . C . PASS END=3413265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:31,0 chr1 3413266 . C . PASS END=3413328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1164:0,83,255:40,0 chr1 3413329 . T . PASS END=3413336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1054:0,74,255:26,0 chr1 3413337 . G . PASS END=3413337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 3413338 . G . PASS END=3413347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,933:0,65,255:25,0 chr1 3413552 . G . PASS END=3413566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 3413567 . G . PASS END=3413567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 3413568 . G . PASS END=3413578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 3413579 . C . PASS END=3413579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3413580 . A . PASS END=3413580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 3413581 . G . PASS END=3413581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3413582 . C . PASS END=3413582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 3413583 . A . PASS END=3413599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 3413600 . C . PASS END=3413600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 3413601 . G . PASS END=3413638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 3413639 . G . PASS END=3413644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr1 3413645 . T . PASS END=3413646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:21,0 chr1 3413647 . T . PASS END=3413649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 3413650 . G . PASS END=3413651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 3413652 . A . PASS END=3413683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 3413797 . C . PASS END=3413798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 3413799 . T . PASS END=3413800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 3413801 . C . PASS END=3413807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 3413808 . C . PASS END=3413830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1019:0,84,255:36,0 chr1 3413831 . A . PASS END=3413867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:35:0,95,1319:0,95,255:39,0 chr1 3413868 . C G, 42.79 PASS DP=37;MQ=250.00;MQRankSum=4.947;ReadPosRankSum=3.420;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,13,0:0.351,0.000:37:12,6,0:12,7,0:42:78,0,50,465,858,1323:255,0,255:24,0:4.2793e+01,2.5007e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,8,5:9,15,7,6 chr1 3413869 . C . PASS END=3413879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1390:0,111,255:37,0 chr1 3413880 . C . PASS END=3413880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr1 3413881 . T . PASS END=3413905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1227:0,88,255:36,0 chr1 3413906 . A . PASS END=3413910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 3413911 . A . PASS END=3413925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,992:0,70,255:26,0 chr1 3414055 . C . PASS END=3414060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 3414061 . C . PASS END=3414064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 3414065 . C . PASS END=3414098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 3414099 . A . PASS END=3414099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 3414100 . G . PASS END=3414104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 3414105 . C . PASS END=3414112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 3414113 . A . PASS END=3414113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:11,0 chr1 3414114 . G . PASS END=3414114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 3414115 . G . PASS END=3414124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 3414125 . C . PASS END=3414125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:11,0 chr1 3414126 . C . PASS END=3414126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 3414127 . T . PASS END=3414140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 3414141 . C . PASS END=3414148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 3414149 . C . PASS END=3414171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 3414172 . G . PASS END=3414180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 3414181 . A . PASS END=3414185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 3414935 . G . PASS END=3414942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:21,0 chr1 3414943 . C . PASS END=3414944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 3414945 . C . PASS END=3414949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3414950 . C . PASS END=3414954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 3414955 . G . PASS END=3414968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:23,0 chr1 3414969 . G . PASS END=3414969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 3414970 . C . PASS END=3414970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 3414971 . A . PASS END=3414971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:21,0 chr1 3414972 . G . PASS END=3414972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 3414973 . A . PASS END=3414973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 3414974 . G . PASS END=3414980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:26,0 chr1 3414981 . G . PASS END=3414982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,898:0,42,255:26,0 chr1 3414983 . C . PASS END=3414984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 3414985 . G . PASS END=3414985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3414986 . T . PASS END=3414986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 3414987 . G . PASS END=3414987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 3414988 . T . PASS END=3414988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:27,0 chr1 3414989 . G . PASS END=3415063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1189:0,84,255:36,0 chr1 3415262 . C . PASS END=3415262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 3415263 . C . PASS END=3415263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 3415264 . T . PASS END=3415264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 3415265 . T . PASS END=3415266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 3415267 . T . PASS END=3415267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 3415268 . C . PASS END=3415270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:18,0 chr1 3415271 . A . PASS END=3415271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 3415272 . G . PASS END=3415282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:18,0 chr1 3415283 . C . PASS END=3415283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 3415284 . C . PASS END=3415285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 3415286 . A . PASS END=3415286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 3415287 . G . PASS END=3415302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,660:0,44,255:19,0 chr1 3415303 . C . PASS END=3415333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:24,0 chr1 3415334 . C . PASS END=3415334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 3415335 . G . PASS END=3415338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 3415339 . T . PASS END=3415339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 3415340 . G . PASS END=3415343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 3415344 . G . PASS END=3415344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 3415345 . A . PASS END=3415354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 3415355 . G . PASS END=3415355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 3415356 . C . PASS END=3415365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:21,0 chr1 3415366 . T . PASS END=3415390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,46,255:18,0 chr1 3415702 . C . PASS END=3415706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:23,0 chr1 3415707 . A . PASS END=3415707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 3415708 . G . PASS END=3415725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:24,0 chr1 3415726 . A . PASS END=3415726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 3415727 . G . PASS END=3415731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,914:0,72,255:26,0 chr1 3415732 . G . PASS END=3415745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr1 3415746 . T . PASS END=3415747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 3415748 . C . PASS END=3415753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 3415754 . G . PASS END=3415756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 3415757 . A . PASS END=3415757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 3415758 . G . PASS END=3415758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 3415759 . G . PASS END=3415766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 3415767 . G . PASS END=3415776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 3415777 . T . PASS END=3415782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 3415783 . A . PASS END=3415803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 3415804 . T . PASS END=3415804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 3415805 . G . PASS END=3415821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 3415822 . C . PASS END=3415822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 3415823 . T . PASS END=3415823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3415824 . G . PASS END=3415824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 3415825 . G . PASS END=3415830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 3416152 . T . PASS END=3416160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:17,0 chr1 3416161 . A . PASS END=3416161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 3416162 . G . PASS END=3416164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 3416165 . G . PASS END=3416165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 3416166 . G . PASS END=3416167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 3416168 . G . PASS END=3416168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 3416169 . C . PASS END=3416206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:23,0 chr1 3416207 . G . PASS END=3416207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 3416208 . G . PASS END=3416213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 3416214 . C . PASS END=3416214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 3416215 . A . PASS END=3416222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3416223 . C . PASS END=3416223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 3416224 . C . PASS END=3416226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3416227 . C . PASS END=3416251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 3416252 . G . PASS END=3416252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:13,0 chr1 3416253 . T . PASS END=3416255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 3416256 . A . PASS END=3416256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:14,0 chr1 3416257 . A . PASS END=3416257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 3416258 . T . PASS END=3416258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 3416259 . C . PASS END=3416262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 3416263 . A . PASS END=3416263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,446:0,31,255:14,0 chr1 3416264 . G . PASS END=3416264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 3416265 . A . PASS END=3416265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 3416266 . A . PASS END=3416266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr1 3416267 . G . PASS END=3416267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3416268 . C . PASS END=3416268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 3416269 . C . PASS END=3416271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3416272 . C . PASS END=3416272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 3416273 . C . PASS END=3416279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr1 3416280 . G . PASS END=3416280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr1 3416360 . C . PASS END=3416364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 3416365 . T . PASS END=3416365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 3416366 . C . PASS END=3416366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3416367 . G . PASS END=3416367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 3416368 . C . PASS END=3416368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3416369 . A . PASS END=3416369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 3416370 . G . PASS END=3416372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:12,0 chr1 3416373 . G . PASS END=3416373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr1 3416374 . G . PASS END=3416391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 3416392 . G . PASS END=3416392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,418:0,8,255:12,0 chr1 3416393 . G . PASS END=3416396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 3416397 . G . PASS END=3416397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 3416398 . G . PASS END=3416411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 3416412 . G . PASS END=3416412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr1 3416413 . A . PASS END=3416415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 3416416 . T . PASS END=3416442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 3416443 . T . PASS END=3416448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 3416449 . C A, 46.31 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=1.776;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,5,0:0.333,0.000:15:3,4,0:7,1,0:45:81,0,50,179,358,536:149,0,255:10,0:4.6310e+01,1.2322e-04,5.3000e+01,1.7883e+02,3.9239e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,2,3:5,5,1,4 chr1 3416450 . G . PASS END=3416461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 3416462 . C . PASS END=3416462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr1 3416463 . G . PASS END=3416470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3416471 . A . PASS END=3416486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 3416487 . C . PASS END=3416488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 3417197 . G . PASS END=3417206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 3417207 . C . PASS END=3417210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 3417211 . G A, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=1.373;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:5,7,0:6,3,0:48:85,0,50,358,385,743:255,0,255:11,0:4.9897e+01,6.6269e-05,5.3000e+01,3.5765e+02,4.2011e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,8,2:5,6,7,3 chr1 3417212 . G . PASS END=3417222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:25,0 chr1 3417223 . C . PASS END=3417223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 3417224 . C . PASS END=3417231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 3417232 . C . PASS END=3417240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 3417241 . A . PASS END=3417241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 3417242 . G . PASS END=3417248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1186:0,96,255:32,0 chr1 3417249 . G . PASS END=3417300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:33,0 chr1 3417301 . T . PASS END=3417301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 3417302 . C . PASS END=3417306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 3417307 . C . PASS END=3417322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr1 3417323 . C . PASS END=3417328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 3417530 . C . PASS END=3417548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:9,0 chr1 3417549 . G . PASS END=3417569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 3417570 . G . PASS END=3417645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr1 3417646 . C . PASS END=3417658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 3417741 . C . PASS END=3417758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 3417759 . C . PASS END=3417759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 3417760 . G . PASS END=3417760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 3417761 . A . PASS END=3417761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 3417762 . C . PASS END=3417764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 3417765 . A . PASS END=3417771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 3417772 . G . PASS END=3417773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 3417774 . G . PASS END=3417785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:13,0 chr1 3417786 . C . PASS END=3417791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:16,0 chr1 3417792 . T . PASS END=3417792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 3417793 . C . PASS END=3417817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 3417818 . T . PASS END=3417818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 3417819 . G . PASS END=3417872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 3418360 . C . PASS END=3418369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 3418370 . G . PASS END=3418370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 3418371 . T . PASS END=3418382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 3418383 . C . PASS END=3418390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 3418391 . C T, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.843;ReadPosRankSum=0.583;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,6,0:0.500,0.000:12:4,2,0:2,4,0:48:85,0,50,215,215,429:188,0,197:6,0:5.0000e+01,6.5233e-05,5.3000e+01,2.1461e+02,2.4936e+02,4.3220e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,2,4:4,2,4,2 chr1 3418392 . G . PASS END=3418418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:13,0 chr1 3418419 . T . PASS END=3418428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 3418429 . C . PASS END=3418429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 3418430 . C . PASS END=3418440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 3418441 . A . PASS END=3418441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 3418442 . G . PASS END=3418442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 3418443 . C . PASS END=3418443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 3418444 . A . PASS END=3418483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 3418484 . C . PASS END=3418485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 3421772 . C . PASS END=3421903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:36:0,81,1215:0,87,255:40,0 chr1 3421904 . A . PASS END=3421906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:33:0,75,1125:0,83,255:25,0 chr1 3421986 . C . PASS END=3422016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,941:0,78,255:26,0 chr1 3422017 . C . PASS END=3422025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 3422026 . G . PASS END=3422026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3422027 . C . PASS END=3422029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3422030 . C . PASS END=3422030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 3422031 . T . PASS END=3422036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 3422037 . C . PASS END=3422037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3422038 . C . PASS END=3422040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3422041 . C . PASS END=3422044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 3422045 . T . PASS END=3422053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 3422054 . T . PASS END=3422054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr1 3422055 . G . PASS END=3422078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,89,255:32,0 chr1 3422079 . A . PASS END=3422107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:26,0 chr1 3422108 . C . PASS END=3422108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 3422109 . A . PASS END=3422115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:21,0 chr1 3422116 . G . PASS END=3422120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 3422672 . T . PASS END=3422672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,697:0,47,255:20,0 chr1 3422673 . G . PASS END=3422712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,695:0,63,255:24,0 chr1 3422713 . C . PASS END=3422713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 3422714 . A . PASS END=3422733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:24,0 chr1 3422734 . C . PASS END=3422734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 3422735 . A . PASS END=3422738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 3422739 . G . PASS END=3422739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,2 chr1 3422740 . C . PASS END=3422740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,861:0,9,255:21,2 chr1 3422741 . C . PASS END=3422741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 3422742 . C . PASS END=3422747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 3422748 . G . PASS END=3422748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 3422749 . G . PASS END=3422752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 3422753 . A . PASS END=3422753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 3422754 . G . PASS END=3422759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 3422760 . T . PASS END=3422785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 3422786 . A . PASS END=3422790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 3422791 . T . PASS END=3422791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 3422792 . T . PASS END=3422797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 3422798 . A . PASS END=3422800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 3424359 . C . PASS END=3424382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,878:0,69,255:25,0 chr1 3424383 . C . PASS END=3424387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1111:0,87,255:30,0 chr1 3424388 . G A, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=2.406;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:9,9,0:6,6,0:48:85,0,50,479,537,1015:255,0,255:15,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,4,9,6:9,6,9,6 chr1 3424389 . G . PASS END=3424389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 3424390 . G . PASS END=3424390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 3424391 . G . PASS END=3424425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1180:0,89,255:37,0 chr1 3424426 . C . PASS END=3424478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1305:0,89,255:38,0 chr1 3424479 . G . PASS END=3424487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 3425122 . T . PASS END=3425126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,441:0,36,255:13,0 chr1 3425127 . T . PASS END=3425133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:18,0 chr1 3425134 . T . PASS END=3425134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 3425135 . G . PASS END=3425136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 3425137 . G . PASS END=3425170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:24,0 chr1 3425171 . C . PASS END=3425171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 3425172 . A . PASS END=3425207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,914:0,72,255:25,0 chr1 3425208 . T . PASS END=3425209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 3425210 . A . PASS END=3425214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 3425215 . T . PASS END=3425216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 3425217 . A . PASS END=3425220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 3425221 . T . PASS END=3425221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 3425222 . G . PASS END=3425222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 3425223 . C . PASS END=3425223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3425224 . A . PASS END=3425224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:20,0 chr1 3425225 . G . PASS END=3425228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 3425229 . T . PASS END=3425253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,675:0,43,255:19,0 chr1 3425639 . C . PASS END=3425671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr1 3425672 . A . PASS END=3425691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 3425692 . G . PASS END=3425692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 3425693 . C . PASS END=3425693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 3425694 . C . PASS END=3425732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr1 3425733 . C . PASS END=3425733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 3425734 . T . PASS END=3425739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 3425740 . A . PASS END=3425741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 3425742 . G . PASS END=3425742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3425743 . G . PASS END=3425743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 3425744 . C . PASS END=3425744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3425745 . A . PASS END=3425745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 3425746 . A . PASS END=3425747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 3425748 . G . PASS END=3425748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 3425749 . T . PASS END=3425755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 3425756 . G . PASS END=3425756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr1 3425757 . G . PASS END=3425781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 3425782 . T . PASS END=3425796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 3425797 . G . PASS END=3425797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 3425798 . G . PASS END=3425809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,180:6,0 chr1 3426434 . G . PASS END=3426440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:19,0 chr1 3426441 . G . PASS END=3426443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 3426444 . C . PASS END=3426444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr1 3426445 . C . PASS END=3426493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:25,0 chr1 3426494 . A . PASS END=3426494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 3426495 . G . PASS END=3426509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,939:0,75,255:25,0 chr1 3426510 . G . PASS END=3426547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,629:0,48,255:18,0 chr1 3426548 . C . PASS END=3426556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 3427347 . C . PASS END=3427390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:18,0 chr1 3427391 . C . PASS END=3427405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr1 3427406 . C . PASS END=3427406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 3427407 . C . PASS END=3427432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,799:0,66,255:24,0 chr1 3427433 . T . PASS END=3427438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 3427439 . C . PASS END=3427466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 3428114 . C . PASS END=3428115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 3428116 . A . PASS END=3428116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 3428117 . T . PASS END=3428122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 3428123 . T . PASS END=3428159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:31:0,90,1350:0,93,255:40,0 chr1 3428160 . T G, 50.00 PASS DP=50;MQ=249.58;MQRankSum=5.496;ReadPosRankSum=4.137;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,31,0:0.620,0.000:50:11,12,0:8,19,0:46:85,0,45,1104,651,1755:255,0,255:18,0:5.0000e+01,1.1649e-04,4.7734e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,18,13:12,7,21,10 chr1 3428161 . G . PASS END=3428197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,100,1800:0,100,255:40,0 chr1 3428198 . G . PASS END=3428251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,117,1546:0,117,255:40,0 chr1 3428570 . G . PASS END=3428570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1434:0,101,255:36,0 chr1 3428571 . G . PASS END=3428607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:37:0,98,1380:0,98,255:40,0 chr1 3428608 . G A, 50.00 PASS DP=42;MQ=249.33;MQRankSum=5.029;ReadPosRankSum=3.209;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,23,0:0.548,0.000:42:11,15,0:8,8,0:48:85,0,49,807,679,1486:255,0,255:19,0:5.0000e+01,6.9634e-05,5.2214e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,7,16:12,7,11,12 chr1 3428609 . C . PASS END=3428645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:38:0,96,1411:0,104,255:40,0 chr1 3428646 . G . PASS END=3428687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1063:0,84,255:32,0 chr1 3428688 . C . PASS END=3428692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 3431114 . C . PASS END=3431151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:19,0 chr1 3431152 . A . PASS END=3431152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 3431153 . C . PASS END=3431156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 3431157 . G . PASS END=3431167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 3431168 . G . PASS END=3431168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 3431169 . G . PASS END=3431172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 3431173 . A . PASS END=3431177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr1 3431178 . C . PASS END=3431178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 3431179 . C . PASS END=3431209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 3431210 . C . PASS END=3431218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 3431219 . T . PASS END=3431219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 3431220 . G . PASS END=3431236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 3431966 . G . PASS END=3431966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 3431967 . G . PASS END=3431967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 3431968 . A . PASS END=3431968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 3431969 . C . PASS END=3431969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 3431970 . A . PASS END=3431975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,695:0,66,255:23,0 chr1 3431976 . C . PASS END=3431976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 3431977 . C . PASS END=3431989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:25,0 chr1 3431990 . G . PASS END=3431990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 3431991 . G . PASS END=3432011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,886:0,61,255:26,0 chr1 3432012 . C . PASS END=3432012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 3432013 . T . PASS END=3432030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,861:0,62,255:25,0 chr1 3432031 . A . PASS END=3432035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 3432036 . G . PASS END=3432049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,947:0,64,255:25,0 chr1 3432050 . G . PASS END=3432050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 3432051 . G . PASS END=3432051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3432052 . T . PASS END=3432052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 3432053 . G . PASS END=3432075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,893:0,65,255:25,0 chr1 3432076 . G . PASS END=3432076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 3432077 . C . PASS END=3432077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 3432078 . G . PASS END=3432078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:19,0 chr1 3432079 . C . PASS END=3432091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 3440688 . C . PASS END=3440707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:17,0 chr1 3440708 . G . PASS END=3440733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,747:0,63,255:26,0 chr1 3440734 . C . PASS END=3440752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:28,0 chr1 3440753 . G . PASS END=3440786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,931:0,64,255:26,0 chr1 3440787 . T . PASS END=3440799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,847:0,69,255:23,0 chr1 3440800 . T . PASS END=3440810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 3447644 . C . PASS END=3447665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,815:0,66,255:26,0 chr1 3447666 . C . PASS END=3447681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:30,0 chr1 3447682 . T . PASS END=3447682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 3447683 . G . PASS END=3447712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:33,0 chr1 3447713 . A . PASS END=3447713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 3447714 . G . PASS END=3447717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 3447718 . T . PASS END=3447727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr1 3447728 . G . PASS END=3447729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:25:0,49,914:0,49,255:23,0 chr1 3447730 . G . PASS END=3447744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 3447745 . G . PASS END=3447764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,54,255:18,0 chr1 3447765 . A . PASS END=3447765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:13,0 chr1 3447766 . A . PASS END=3447770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 3447771 . C . PASS END=3447771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 3447772 . C . PASS END=3447773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 3447774 . G . PASS END=3447777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 3447778 . G . PASS END=3447778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 3447779 . C . PASS END=3447780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 3447781 . G . PASS END=3447781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 3447782 . C . PASS END=3447786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 3447787 . C . PASS END=3447787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 3447788 . C . PASS END=3447791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 3447792 . G . PASS END=3447792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 3447793 . T . PASS END=3447796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 3447797 . G . PASS END=3447797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 3447798 . G . PASS END=3447800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 3447801 . C . PASS END=3447809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 3463562 . C . PASS END=3463562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 3463563 . T . PASS END=3463563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,543:0,20,255:15,0 chr1 3463564 . T . PASS END=3463587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 3463588 . A . PASS END=3463588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:14,0 chr1 3463589 . G . PASS END=3463597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr1 3463598 . T . LowGQ END=3463600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,474:20,0,255:17,4 chr1 3463601 . G . PASS END=3463608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 3463609 . C . PASS END=3463609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 3463610 . A . PASS END=3463619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 3463620 . G . PASS END=3463620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 3463621 . A . PASS END=3463629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 3463630 . A . PASS END=3463636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 3463637 . C . PASS END=3463637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 3463638 . C . PASS END=3463639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 3463640 . G . PASS END=3463640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 3463641 . G . PASS END=3463644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3463645 . C . PASS END=3463666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 3463667 . C . PASS END=3463667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 3463668 . G . PASS END=3463682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:12,0 chr1 3463683 . C . PASS END=3463687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 3496389 . C . PASS END=3496406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1014:0,68,255:26,0 chr1 3496407 . C . PASS END=3496411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 3496412 . A . PASS END=3496414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 3496415 . C . PASS END=3496416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3496417 . G . PASS END=3496423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3496424 . C . PASS END=3496424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3496425 . A . PASS END=3496425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3496426 . G . PASS END=3496430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 3496431 . A . PASS END=3496431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 3496432 . C . PASS END=3496436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1185:0,80,255:29,0 chr1 3496437 . G . PASS END=3496437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 3496438 . G . PASS END=3496441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 3496442 . G . PASS END=3496443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 3496444 . G . PASS END=3496452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 3496453 . A . PASS END=3496453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 3496454 . C . PASS END=3496460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr1 3496461 . C . PASS END=3496461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 3496462 . A . PASS END=3496462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3496463 . C . PASS END=3496463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:27,0 chr1 3496464 . C . PASS END=3496478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,962:0,70,255:26,0 chr1 3496479 . T C, 130.80 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,15,0:0,13,0:81:169,84,0,1046,84,1046:255,84,0:0,0:1.3080e+02,8.0800e+01,0.0000e+00,4.5000e+02,1.1557e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,16:0,0,11,17 chr1 3496480 . G . PASS END=3496487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr1 3496488 . A . PASS END=3496488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:23,0 chr1 3496489 . T . PASS END=3496489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3496490 . T . PASS END=3496490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 3496491 . C . PASS END=3496493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 3511902 . C . PASS END=3511902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 3511903 . C . PASS END=3511903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr1 3511904 . G . PASS END=3511904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 3511905 . A . PASS END=3511905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 3511906 . G . PASS END=3511906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 3511907 . A . PASS END=3511907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 3511908 . G . PASS END=3511911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 3511912 . G . PASS END=3511912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,684:0,22,255:21,0 chr1 3511913 . C . PASS END=3511914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:22,0 chr1 3511915 . C . PASS END=3511915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 3511916 . T . LowGQ END=3511916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,593:14,0,255:18,0 chr1 3511917 . C . PASS END=3511917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:22,0 chr1 3511918 . C . PASS END=3511918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 3511919 . T . PASS END=3511919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:6:24:0,6,612:0,6,255:20,0 chr1 3511920 . C . PASS END=3511921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,738:0,55,255:23,0 chr1 3511922 . T . PASS END=3511922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,766:0,72,255:24,0 chr1 3511923 . C . PASS END=3511923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:23,0 chr1 3511924 . G . PASS END=3511924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 3511925 . G . PASS END=3511925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 3511926 . G . PASS END=3511926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 3511927 . C . PASS END=3511927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,772:0,41,255:22,0 chr1 3511928 . T . PASS END=3511928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 3511929 . G . PASS END=3511929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 3511930 . C . PASS END=3511935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 3511936 . C . PASS END=3511936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr1 3511937 . C . PASS END=3511938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 3511939 . C . PASS END=3511939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr1 3511940 . C . PASS END=3511940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:26,0 chr1 3511941 . C . PASS END=3511941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 3511942 . T . PASS END=3511942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,787:0,15,255:23,0 chr1 3511943 . C . PASS END=3511943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 3511944 . G . PASS END=3511944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:26,0 chr1 3511945 . G . PASS END=3511945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,862:0,29,255:26,0 chr1 3511946 . C . PASS END=3511947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3511948 . G . PASS END=3511948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:26,0 chr1 3511949 . C . PASS END=3511952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 3511953 . T . PASS END=3511953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:5:31:0,5,888:0,5,255:26,0 chr1 3511954 . G . PASS END=3511954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,970:0,43,255:27,0 chr1 3511955 . A . PASS END=3511955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 3511956 . G . PASS END=3511956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,0 chr1 3511957 . C . PASS END=3511957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 3511958 . A . PASS END=3511958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 3511959 . C . PASS END=3511959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 3511960 . G . PASS END=3511960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,978:0,38,255:26,0 chr1 3511961 . G . PASS END=3511961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:56:35:0,56,1183:0,56,255:29,0 chr1 3511962 . T . PASS END=3511964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1255:0,89,255:31,0 chr1 3511965 . G . PASS END=3511965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1125:0,50,255:31,0 chr1 3511966 . G . PASS END=3511973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:31,0 chr1 3511974 . T . PASS END=3511974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 3511975 . G . PASS END=3511981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:30,0 chr1 3511982 . A . PASS END=3511982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr1 3511983 . C . PASS END=3511986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 3511987 . C . PASS END=3511988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 3511989 . T . PASS END=3511991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 3511992 . A . PASS END=3511992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 3511993 . G . PASS END=3511994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 3511995 . C . PASS END=3512009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:25,0 chr1 3512010 . T . PASS END=3512010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 3512011 . T . PASS END=3512011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 3519030 . C . PASS END=3519033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 3519034 . G . PASS END=3519040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 3519041 . A . PASS END=3519041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 3519042 . C . PASS END=3519042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 3519043 . C . PASS END=3519043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 3519044 . C . PASS END=3519047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,915:0,75,255:26,0 chr1 3519048 . C . PASS END=3519048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 3519049 . A . PASS END=3519050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 3519051 . C . PASS END=3519051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 3519052 . A . PASS END=3519062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 3519063 . C . PASS END=3519066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 3519067 . A . PASS END=3519079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 3519080 . C . PASS END=3519081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3519082 . C . PASS END=3519104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 3519105 . T . PASS END=3519105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 3519106 . G . PASS END=3519111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 3519112 . A . PASS END=3519112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 3519113 . C . PASS END=3519115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 3519116 . C . PASS END=3519117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 3519118 . G . PASS END=3519121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3519122 . G . PASS END=3519122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr1 3519123 . C . PASS END=3519124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3519125 . G . PASS END=3519125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 3519126 . C . PASS END=3519128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3519129 . A . PASS END=3519129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 3519130 . C . PASS END=3519136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 3519137 . C . PASS END=3519141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 3519142 . C . PASS END=3519160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:17,0 chr1 3519161 . G . PASS END=3519164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 3527702 . A . PASS END=3527702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 3527703 . T . PASS END=3527703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 3527704 . G . PASS END=3527724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:18,0 chr1 3527725 . G . PASS END=3527725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 3527726 . G . PASS END=3527728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 3527729 . C . PASS END=3527729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 3527730 . G . PASS END=3527753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:19,0 chr1 3527754 . G . PASS END=3527755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3527756 . A . PASS END=3527763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 3527764 . G . PASS END=3527764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,2 chr1 3527765 . A . LowGQ END=3527767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,729:0,0,255:21,2 chr1 3527768 . A . PASS END=3527768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 3527769 . G . PASS END=3527778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 3527779 . C . PASS END=3527781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,810:0,53,255:20,0 chr1 3527782 . C . PASS END=3527782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 3527783 . G . PASS END=3527786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,790:0,53,255:19,0 chr1 3527787 . G . PASS END=3527787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:18,0 chr1 3527788 . G . PASS END=3527788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 3527789 . A . PASS END=3527789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr1 3527790 . C . PASS END=3527792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 3527793 . C . PASS END=3527793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 3527794 . C . PASS END=3527800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:18,0 chr1 3527801 . C . PASS END=3527801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:14,0 chr1 3527802 . C . PASS END=3527806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 3527807 . G . PASS END=3527807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:13,0 chr1 3527808 . C . PASS END=3527808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 3527809 . C . PASS END=3527813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr1 3527814 . C . PASS END=3527814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 3527815 . C . PASS END=3527821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 3527822 . A . PASS END=3527823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 3527824 . G . PASS END=3527824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 3527825 . A . PASS END=3527825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:13,0 chr1 3527826 . A . PASS END=3527832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 3539908 . C . PASS END=3539909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 3539910 . G . PASS END=3539910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 3539911 . C . PASS END=3539911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 3539912 . A . PASS END=3539912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 3539913 . C . PASS END=3539940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,654:0,57,255:19,0 chr1 3539941 . G . PASS END=3539949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 3539950 . A . PASS END=3539950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 3539951 . C . PASS END=3539983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 3539984 . T . PASS END=3539984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,2 chr1 3539985 . G . PASS END=3539985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,878:0,15,255:25,2 chr1 3539986 . G . PASS END=3539986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 3539987 . G . PASS END=3540008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,939:0,75,255:26,0 chr1 3540009 . T . PASS END=3540009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 3540010 . C . PASS END=3540023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 3540024 . T G, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=0.308;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:7,7,0:6,6,0:48:85,0,50,462,465,927:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,5,8:6,7,7,6 chr1 3540025 . G . PASS END=3540042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 3540043 . T . PASS END=3540046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 3540047 . C . PASS END=3540061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 3540062 . C . PASS END=3540076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,773:0,72,255:25,0 chr1 3540077 . C . PASS END=3540077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 3540078 . G . PASS END=3540087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 3540088 . G . PASS END=3540088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 3540089 . C . PASS END=3540090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 3540091 . G . PASS END=3540120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,675:0,48,255:19,0 chr1 3540872 . A . PASS END=3540874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 3540875 . T . PASS END=3540875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr1 3540876 . T . PASS END=3540884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 3540885 . A . PASS END=3540885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 3540886 . A . PASS END=3540903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,687:0,66,255:24,0 chr1 3540904 . G . PASS END=3540905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 3540906 . T . PASS END=3540909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 3540910 . T . PASS END=3540910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,719:0,55,255:20,0 chr1 3540911 . G . PASS END=3540928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,839:0,69,255:24,0 chr1 3540929 . G . PASS END=3540929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 3540930 . C . PASS END=3540975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:25,0 chr1 3541637 . A . PASS END=3541644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 3541645 . A . PASS END=3541645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 3541646 . C . PASS END=3541646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 3541647 . T . PASS END=3541647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 3541648 . G . PASS END=3541682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 3541683 . C . PASS END=3541696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 3541697 . G . PASS END=3541698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 3541699 . C . PASS END=3541706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 3541707 . A . PASS END=3541707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 3541708 . G . PASS END=3541715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 3541716 . C . PASS END=3541716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 3541717 . A . PASS END=3541741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr1 3541742 . C . PASS END=3541742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 3541743 . C . PASS END=3541743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 3541744 . G . PASS END=3541748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 3541749 . C . PASS END=3541761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 3541762 . G . PASS END=3541772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 3541773 . T . PASS END=3541773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 3541774 . C . PASS END=3541793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 3541794 . A . LowGQ END=3541794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 3541795 . C . PASS END=3541837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,33,255:13,0 chr1 3541988 . C . PASS END=3541990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1388:0,101,255:36,0 chr1 3541991 . G . PASS END=3541991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:35,0 chr1 3541992 . G . PASS END=3542079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1321:0,95,255:40,0 chr1 3542277 . G . PASS END=3542282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 3542283 . T . PASS END=3542283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 3542284 . C . PASS END=3542285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 3542286 . C . PASS END=3542286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 3542287 . T . PASS END=3542287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 3542288 . G . PASS END=3542288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 3542289 . G . PASS END=3542298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:31,0 chr1 3542299 . A . PASS END=3542299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr1 3542300 . A . PASS END=3542300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1066:0,93,255:31,0 chr1 3542301 . G . PASS END=3542301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 3542302 . G . PASS END=3542308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr1 3542309 . T . PASS END=3542309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:30,0 chr1 3542310 . G . PASS END=3542443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1148:0,93,255:40,0 chr1 3542444 . C . PASS END=3542444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 3542445 . G . PASS END=3542445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3542446 . C . PASS END=3542453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 3544064 . G . PASS END=3544068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1194:0,93,255:32,0 chr1 3544069 . A . PASS END=3544069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 3544070 . A . PASS END=3544208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1155:0,88,255:40,0 chr1 3544209 . C . PASS END=3544217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:29:0,63,945:0,87,255:26,0 chr1 3544973 . T . PASS END=3544980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:19,0 chr1 3544981 . C . PASS END=3544989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,832:0,66,255:24,0 chr1 3544990 . T . PASS END=3544990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 3544991 . C . PASS END=3544995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:29,0 chr1 3544996 . A . PASS END=3544996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 3544997 . A . PASS END=3545128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1056:0,80,255:40,0 chr1 3545129 . C . PASS END=3545163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1218:0,86,255:40,0 chr1 3545164 . T . PASS END=3545165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:31,0 chr1 3545166 . A . PASS END=3545167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 3547539 . C . PASS END=3547543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 3547544 . T . PASS END=3547544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 3547545 . G . PASS END=3547559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:17,0 chr1 3547560 . T . PASS END=3547560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr1 3547561 . C . PASS END=3547565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 3547566 . G . PASS END=3547603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:26,0 chr1 3547604 . G . PASS END=3547604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 3547605 . G . PASS END=3547612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 3547613 . G . PASS END=3547613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3547614 . A . PASS END=3547614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 3547615 . T . PASS END=3547618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 3547619 . T . PASS END=3547629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 3547630 . G . PASS END=3547648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 3547649 . A . PASS END=3547667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 3547668 . C . PASS END=3547669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 3547670 . C . PASS END=3547677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 3547678 . T . PASS END=3547678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 3547679 . C . PASS END=3547681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3547962 . T . PASS END=3548038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,607:0,41,255:19,0 chr1 3548039 . G . PASS END=3548042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3548043 . C . PASS END=3548050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 3548051 . A . PASS END=3548056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 3548057 . A . PASS END=3548057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3548058 . G . PASS END=3548074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 3548075 . G . PASS END=3548075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 3548076 . G . PASS END=3548084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 3548085 . G . PASS END=3548085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 3548086 . C . PASS END=3548086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 3548087 . T . PASS END=3548087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 3548088 . G . PASS END=3548098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 3548099 . A . PASS END=3548122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 3548123 . G . PASS END=3548123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 3548124 . G . PASS END=3548127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 3548128 . C . PASS END=3548128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 3548129 . A . PASS END=3548130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3548131 . T . PASS END=3548135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 3548136 . T C, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,9,0:0,16,0:72:160,75,0,914,75,914:255,78,0:0,0:1.2178e+02,7.1776e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,14:0,0,15,10 chr1 3548137 . G . PASS END=3548153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 3548154 . C . PASS END=3548156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 3548157 . C . PASS END=3548173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:26,0 chr1 3548174 . G . PASS END=3548193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 3548194 . C . PASS END=3548194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 3548195 . A . PASS END=3548199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3548200 . C . PASS END=3548221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 3548777 . C . PASS END=3548783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 3548784 . T . PASS END=3548785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1047:0,71,255:29,0 chr1 3548786 . T . PASS END=3548794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 3548795 . A . PASS END=3548796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 3548797 . T . PASS END=3548797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 3548798 . A . PASS END=3548799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 3548800 . C . PASS END=3548801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 3548802 . G . PASS END=3548831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1163:0,80,255:38,0 chr1 3548832 . G C, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=3.095;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:6,10,0:13,9,0:48:85,0,50,664,680,1343:255,0,255:19,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,9,10:10,9,12,7 chr1 3548833 . A . PASS END=3548850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1157:0,100,255:39,0 chr1 3548851 . T . PASS END=3548851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr1 3548852 . C . PASS END=3548869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1319:0,95,255:35,0 chr1 3548870 . T . PASS END=3548882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:34,0 chr1 3548883 . T . PASS END=3548884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 3548885 . G . PASS END=3548888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr1 3548889 . A . PASS END=3548893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:26,0 chr1 3548894 . C . PASS END=3548898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3548899 . T . PASS END=3548902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,901:0,67,255:24,0 chr1 3549962 . A . PASS END=3549979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 3549980 . G . PASS END=3549994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:17,0 chr1 3549995 . C . PASS END=3549995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 3549996 . G . PASS END=3550009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr1 3550010 . G . PASS END=3550011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 3550012 . A . PASS END=3550012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 3550013 . A . PASS END=3550017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 3550018 . A . PASS END=3550018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr1 3550019 . G . PASS END=3550027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3550028 . G . PASS END=3550029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:20,0 chr1 3550030 . C . PASS END=3550035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 3550036 . T . PASS END=3550036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 3550037 . G . PASS END=3550039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 3550040 . G . PASS END=3550040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 3550041 . G . PASS END=3550044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3550045 . T . PASS END=3550047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 3550048 . T . PASS END=3550048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3550049 . C . PASS END=3550049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 3550050 . G . PASS END=3550053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 3550054 . T . PASS END=3550067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:18:0,49,676:0,49,255:18,0 chr1 3551561 . T . PASS END=3551638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,151,255:40,0 chr1 3551724 . C . PASS END=3551851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1215:0,83,255:40,0 chr1 3551852 . T . PASS END=3551858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,74,255:25,0 chr1 3552508 . C . PASS END=3552514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr1 3552515 . C . PASS END=3552552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1154:0,90,255:40,0 chr1 3552553 . C . PASS END=3552553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 3552554 . C . PASS END=3552577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,92,255:36,0 chr1 3552578 . G . PASS END=3552588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 3552589 . A . PASS END=3552589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,858:0,45,255:24,0 chr1 3552590 . A . PASS END=3552594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 3553559 . C . PASS END=3553646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1260:0,93,255:40,0 chr1 3553647 . C . PASS END=3553657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,73,255:25,0 chr1 3553658 . G . PASS END=3553658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr1 3553659 . A . PASS END=3553662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 3555314 . C . PASS END=3555328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:98:38:0,98,1307:0,98,255:40,0 chr1 3555329 . T . PASS END=3555329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:40,0 chr1 3555330 . C . PASS END=3555386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,108,1479:0,114,255:40,0 chr1 3563230 . A . PASS END=3563266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,472:0,42,255:17,0 chr1 3563267 . G . PASS END=3563267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 3563268 . G . PASS END=3563276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:18,0 chr1 3563277 . A . PASS END=3563277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 3563278 . C . PASS END=3563317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,585:0,41,255:19,0 chr1 3563318 . T . PASS END=3563318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:17,0 chr1 3563319 . G . PASS END=3563336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 3563337 . A . PASS END=3563337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 3563338 . A . PASS END=3563341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr1 3563342 . C . PASS END=3563346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 3563972 . C . PASS END=3564109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,86,255:40,0 chr1 3564110 . C . PASS END=3564115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:34:0,69,1035:0,102,255:24,0 chr1 3564116 . A . PASS END=3564116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:23,0 chr1 3564117 . C . PASS END=3564124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,923:0,75,255:25,0 chr1 3566495 . C . PASS END=3566545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1050:0,83,255:34,0 chr1 3566546 . T . PASS END=3566546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 3566547 . A . PASS END=3566547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3566548 . C . PASS END=3566548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 3566549 . C . PASS END=3566556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 3566557 . A . PASS END=3566563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 3598930 . A . PASS END=3598937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:25,0 chr1 3598938 . G . PASS END=3598949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 3598950 . C . PASS END=3598978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 3598979 . A . PASS END=3598979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 3598980 . C . PASS END=3598992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 3598993 . C . PASS END=3598994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 3599624 . G . PASS END=3599641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:22,0 chr1 3599642 . C . PASS END=3599642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 3599643 . T . PASS END=3599646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,693:0,63,255:21,0 chr1 3599647 . A . PASS END=3599647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 3599648 . C . PASS END=3599659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 3599660 . A . PASS END=3599660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 3599661 . A . PASS END=3599661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,726:0,66,255:22,0 chr1 3599662 . G . PASS END=3599662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 3599663 . C . PASS END=3599663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 3599664 . C . PASS END=3599664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 3599665 . G . PASS END=3599669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:25,0 chr1 3599670 . A . PASS END=3599670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr1 3599671 . A . PASS END=3599672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr1 3599673 . A . PASS END=3599675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,821:0,44,255:24,0 chr1 3599676 . G . PASS END=3599681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,878:0,75,255:25,0 chr1 3599682 . G . PASS END=3599682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 3599683 . T . PASS END=3599687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 3599688 . G . PASS END=3599688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 3599689 . G . PASS END=3599709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 3599710 . T . PASS END=3599710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:19,0 chr1 3599711 . C . PASS END=3599712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 3599713 . T . PASS END=3599713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 3599714 . C . PASS END=3599718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 3599719 . T . PASS END=3599719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 3599720 . G . PASS END=3599720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3599721 . G . PASS END=3599721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr1 3599722 . A . PASS END=3599731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,49,255:17,0 chr1 3599732 . T . PASS END=3599740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,44,255:13,0 chr1 3599741 . C . PASS END=3599744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:13:0,24,360:0,39,255:9,0 chr1 3607470 . A . PASS END=3607476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1288:0,81,255:38,0 chr1 3607477 . A . PASS END=3607477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:36,0 chr1 3607478 . C . PASS END=3607508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1380:0,101,255:40,0 chr1 3624113 . G . PASS END=3624115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 3624116 . C . LowGQ END=3624116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:12,0 chr1 3624117 . A . PASS END=3624117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr1 3624118 . G . LowGQ END=3624118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:12,0 chr1 3624119 . T . PASS END=3624119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr1 3624120 . T . LowGQ END=3624121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,393:0,0,255:12,0 chr1 3624122 . A . PASS END=3624124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 3624125 . C . PASS END=3624125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 3624126 . T . PASS END=3624127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 3624128 . C . PASS END=3624128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 3624129 . T . PASS END=3624129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 3624130 . G . PASS END=3624130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,515:0,12,255:16,0 chr1 3624131 . A . PASS END=3624131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 3624132 . G . PASS END=3624132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 3624133 . C . PASS END=3624133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 3624134 . A . PASS END=3624134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 3624135 . G . PASS END=3624135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 3624136 . C . PASS END=3624136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 3624137 . A . PASS END=3624137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 3624138 . C . PASS END=3624138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 3624139 . C . PASS END=3624139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 3624140 . A . PASS END=3624140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 3624141 . T . PASS END=3624141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:20,0 chr1 3624142 . G . PASS END=3624143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,721:0,47,255:19,0 chr1 3624144 . A . PASS END=3624145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3624146 . C . PASS END=3624147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:19,0 chr1 3624148 . G . PASS END=3624148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,629:0,30,255:18,0 chr1 3624149 . A . PASS END=3624149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 3624150 . T . PASS END=3624150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3624151 . G . PASS END=3624154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,676:0,44,255:19,0 chr1 3624155 . A . PASS END=3624155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 3624156 . G . PASS END=3624156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 3624157 . C . PASS END=3624159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 3624160 . C . PASS END=3624174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,645:0,43,255:19,0 chr1 3624175 . C . PASS END=3624179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 3624180 . A . PASS END=3624182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 3624183 . C . PASS END=3624193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,884:0,62,255:23,0 chr1 3624194 . G . PASS END=3624194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 3624195 . C . PASS END=3624200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:24,0 chr1 3624201 . G . PASS END=3624201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:23,0 chr1 3624202 . C . PASS END=3624214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,894:0,75,255:25,0 chr1 3624215 . T . PASS END=3624215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:21,0 chr1 3624216 . C . PASS END=3624241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:24,0 chr1 3624242 . T . PASS END=3624242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 3624243 . T . PASS END=3624264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,839:0,62,255:26,0 chr1 3624265 . T . PASS END=3624265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 3624266 . G . PASS END=3624286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr1 3624287 . T . PASS END=3624296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 3624297 . C . PASS END=3624311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,587:0,60,255:20,0 chr1 3624312 . T . PASS END=3624323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 3624324 . A . PASS END=3624325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 3624326 . T . PASS END=3624327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 3624328 . C . PASS END=3624328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 3624329 . A . PASS END=3624343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 3624344 . G . PASS END=3624355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 3638585 . T . PASS END=3638598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 3638599 . G . PASS END=3638628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 3638629 . A . PASS END=3638629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 3638630 . T . PASS END=3638630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 3638631 . G . PASS END=3638636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 3638637 . T . PASS END=3638641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 3638642 . A . PASS END=3638642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 3638643 . T . PASS END=3638647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 3638648 . G . PASS END=3638668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 3638669 . G . PASS END=3638673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 3638674 . C T, 76.64 PASS DP=10;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,7,0:0,3,0:27:114,30,0,350,30,350:255,30,0:0,0:7.6643e+01,2.6643e+01,9.4216e-03,3.4750e+02,6.1413e+01,3.5050e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,5:0,0,8,2 chr1 3638675 . G . PASS END=3638677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 3638678 . A . PASS END=3638711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 3638712 . A . PASS END=3638718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 3638719 . C . PASS END=3638729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 3638730 . A . PASS END=3638732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 3638733 . G . PASS END=3638768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:9,0 chr1 3638769 . A . PASS END=3638769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 3638770 . A . PASS END=3638771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 3639918 . G . PASS END=3639965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,99,1452:0,99,255:40,0 chr1 3639966 . T . PASS END=3639966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1319:0,76,255:38,0 chr1 3639967 . C . PASS END=3639987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:37:0,95,1357:0,95,255:40,0 chr1 3639988 . T . PASS END=3639988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr1 3639989 . G . PASS END=3639989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1382:0,111,255:37,0 chr1 3639990 . T . PASS END=3639990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:34,0 chr1 3639991 . C . PASS END=3639993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1349:0,95,255:35,0 chr1 3639994 . C . PASS END=3639994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 3639995 . G . PASS END=3640003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1357:0,95,255:35,0 chr1 3640004 . A . PASS END=3640004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:34,0 chr1 3640005 . G . PASS END=3640015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:35,0 chr1 3640016 . C . PASS END=3640016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1030:0,71,255:29,0 chr1 3640017 . C . PASS END=3640022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,87,255:29,0 chr1 3640023 . A . PASS END=3640023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1093:0,74,255:27,0 chr1 3640024 . G . PASS END=3640024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 3640025 . C . PASS END=3640031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,994:0,60,255:26,0 chr1 3640032 . A . PASS END=3640032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,931:0,29,255:24,0 chr1 3640033 . G . PASS END=3640033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,909:0,43,255:24,0 chr1 3643679 . G . PASS END=3643785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1117:0,80,255:40,0 chr1 3643786 . G . PASS END=3643788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr1 3644192 . T . PASS END=3644196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 3644197 . A . PASS END=3644197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 3644198 . G . PASS END=3644238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,894:0,64,255:26,0 chr1 3644239 . G . PASS END=3644254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 3644255 . A . PASS END=3644255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 3644256 . A . PASS END=3644260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 3644261 . T . PASS END=3644261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 3644262 . G . PASS END=3644270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 3644271 . C . PASS END=3644300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 3644301 . A . PASS END=3644301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:19,0 chr1 3644302 . G . PASS END=3644303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 3644304 . T . PASS END=3644319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,46,255:19,0 chr1 3644320 . C . PASS END=3644326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:12,0 chr1 3644327 . C . PASS END=3644327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 3644328 . A . PASS END=3644334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 3644693 . C . PASS END=3644711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr1 3644712 . T . PASS END=3644712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 3644713 . G . PASS END=3644714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3644715 . C T, 46.40 PASS DP=22;MQ=249.73;MQRankSum=2.832;ReadPosRankSum=3.788;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,8,0:0.364,0.000:22:5,3,0:9,5,0:46:81,0,50,286,501,787:244,0,255:13,0:4.6400e+01,1.2115e-04,5.3000e+01,2.8615e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,4,4:7,7,5,3 chr1 3644716 . G . PASS END=3644731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 3644732 . C . PASS END=3644732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 3644733 . C . PASS END=3644753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 3644754 . T C, 41.35 PASS DP=21;MQ=250.00;MQRankSum=3.464;ReadPosRankSum=1.207;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,6,0:0.286,0.000:21:7,1,0:8,5,0:41:76,0,50,215,536,751:162,0,255:14,0:4.1346e+01,3.4041e-04,5.3000e+01,2.1462e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,2,4:7,8,5,1 chr1 3644755 . G . PASS END=3644755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3644756 . G . PASS END=3644781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,676:0,43,255:19,0 chr1 3645891 . G . PASS END=3645896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 3645897 . G . PASS END=3645905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 3645906 . A . PASS END=3645907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 3645908 . C . PASS END=3645917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:25,0 chr1 3645918 . C . PASS END=3645918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 3645919 . T . PASS END=3645930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 3645931 . A . PASS END=3645931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 3645932 . A . PASS END=3645935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,909:0,75,255:26,0 chr1 3645936 . A . PASS END=3645944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,946:0,81,255:28,0 chr1 3645945 . C . PASS END=3645957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,990:0,70,255:26,0 chr1 3645958 . T . PASS END=3645958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 3645959 . G . PASS END=3645984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 3645985 . G . PASS END=3645986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:22,1 chr1 3645987 . C . PASS END=3645998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr1 3645999 . C . PASS END=3646012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 3646564 . G . PASS END=3646575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 3646576 . G . PASS END=3646576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 3646577 . C . PASS END=3646582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 3646583 . T . PASS END=3646583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 3646584 . C . PASS END=3646585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 3646586 . T . PASS END=3646586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 3646587 . A . PASS END=3646588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:8,0 chr1 3646589 . G . PASS END=3646589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 3646590 . G . PASS END=3646596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 3646597 . C . PASS END=3646598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 3646599 . T . PASS END=3646599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 3646600 . C . PASS END=3646634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr1 3646635 . A . PASS END=3646636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3646637 . C . PASS END=3646673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 3646674 . C . PASS END=3646682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 3646683 . C . PASS END=3646684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 3646685 . G . PASS END=3646691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 3646692 . C . PASS END=3646712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,358:0,33,255:11,0 chr1 3647491 . G . PASS END=3647497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 3647498 . G . PASS END=3647498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3647499 . A . PASS END=3647508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 3647509 . A . PASS END=3647509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 3647510 . C . PASS END=3647607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:30:0,82,1141:0,82,255:40,0 chr1 3647608 . A . PASS END=3647608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 3647609 . C . PASS END=3647616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 3647617 . C . PASS END=3647627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:26,0 chr1 3647628 . A . PASS END=3647629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr1 3648027 . T . PASS END=3648120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1052:0,83,255:40,0 chr1 3649311 . G . PASS END=3649314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 3649315 . T . PASS END=3649315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 3649316 . G . PASS END=3649332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 3649333 . C . PASS END=3649333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 3649334 . C . PASS END=3649339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:12,0 chr1 3649340 . G . PASS END=3649348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 3649349 . G . PASS END=3649349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 3649350 . A . PASS END=3649365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:18,0 chr1 3649366 . T . PASS END=3649371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 3649372 . A . PASS END=3649383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 3649384 . G . PASS END=3649388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 3649389 . G . PASS END=3649402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,837:0,66,255:24,0 chr1 3649403 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=2.723;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:6,11,0:5,2,0:48:85,0,50,453,393,846:255,0,255:11,0:5.0000e+01,6.7045e-05,5.2641e+01,4.5000e+02,4.2743e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,3,9,4:5,6,11,2 chr1 3649404 . C . PASS END=3649411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,841:0,72,255:25,0 chr1 3649412 . G . PASS END=3649420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1058:0,84,255:31,0 chr1 3649421 . T . PASS END=3649421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 3649422 . A . PASS END=3649440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1117:0,93,255:32,0 chr1 3649441 . C . PASS END=3649468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1188:0,83,255:33,0 chr1 3649469 . C . PASS END=3649469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:32,0 chr1 3649470 . C . PASS END=3649504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1194:0,83,255:33,0 chr1 3649505 . C . PASS END=3649505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 3649506 . C . PASS END=3649506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 3649507 . A . PASS END=3649507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 3649508 . C . PASS END=3649514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 3649515 . A . PASS END=3649515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:25,0 chr1 3649516 . C . PASS END=3649524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 3649525 . A . PASS END=3649527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 3649528 . G . PASS END=3649537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 3649538 . A . PASS END=3649538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:23,0 chr1 3649539 . G . PASS END=3649540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 3649541 . C . PASS END=3649541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:22,0 chr1 3649542 . G . PASS END=3649555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:24,0 chr1 3649556 . G . PASS END=3649561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:52:23:0,52,792:0,52,255:18,0 chr1 3649562 . G A, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=1.615;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:6,8,0:4,4,0:48:85,0,50,429,350,779:255,0,255:8,0:5.0000e+01,6.7304e-05,5.2605e+01,4.2919e+02,3.8439e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,2,10:5,5,4,8 chr1 3649563 . G . PASS END=3649599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 3649600 . A . PASS END=3649602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 3649603 . A . PASS END=3649634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,615:0,41,255:19,0 chr1 3649635 . A . PASS END=3649635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 3649636 . T . PASS END=3649640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 3649641 . T . PASS END=3649643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,37,255:14,0 chr1 3669046 . A . PASS END=3669046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 3669047 . T . PASS END=3669052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr1 3669053 . A . PASS END=3669093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1117:0,83,255:37,0 chr1 3669094 . G . PASS END=3669094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 3669095 . A . PASS END=3669160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1335:0,95,255:40,0 chr1 3669161 . T . PASS END=3669200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1305:0,98,255:40,0 chr1 3669201 . A G, 46.08 PASS DP=34;MQ=250.00;MQRankSum=4.820;ReadPosRankSum=2.091;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,13,0:0.382,0.000:34:11,7,0:10,6,0:45:81,0,47,181,181,181:255,0,255:17,0:4.6080e+01,1.5040e-04,5.0000e+01,1.8085e+02,2.1562e+02,1.8386e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,8,6,7:13,8,6,7:3669201 chr1 3669202 . T . PASS END=3669204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:30,0 chr1 3669205 . C G, 46.08 PASS DP=36;MQ=250.00;MQRankSum=4.981;ReadPosRankSum=1.509;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,14,0:0.389,0.000:36:11,8,0:11,6,0:45:81,0,47,181,181,181:255,0,255:18,0:4.6080e+01,1.5040e-04,5.0000e+01,1.8085e+02,2.1562e+02,1.8386e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,8,7,7:13,9,7,7:3669201 chr1 3669206 . A . PASS END=3669245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1170:0,83,255:38,0 chr1 3669246 . G . PASS END=3669361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,86,255:39,0 chr1 3669362 . C . PASS END=3669363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:25,0 chr1 3670682 . A . PASS END=3670703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:18,0 chr1 3670704 . G . PASS END=3670711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 3670712 . G . PASS END=3670721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 3670722 . C . PASS END=3670745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,706:0,57,255:19,0 chr1 3670746 . T . PASS END=3670749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3670750 . C . PASS END=3670779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 3670780 . C . PASS END=3670797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 3670798 . C . PASS END=3670802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 3670803 . G . PASS END=3670805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:10:0,18,270:0,30,255:6,0 chr1 3672021 . G . PASS END=3672117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,84,255:39,0 chr1 3672118 . C . PASS END=3672131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:27:0,72,1080:0,74,255:26,0 chr1 3673297 . G . PASS END=3673319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1025:0,80,255:36,0 chr1 3673320 . A . PASS END=3673320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1166:0,67,255:35,0 chr1 3673321 . G . PASS END=3673404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1280:0,84,255:40,0 chr1 3673405 . G . PASS END=3673405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:31,0 chr1 3673406 . C . PASS END=3673420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:32,0 chr1 3673421 . G . PASS END=3673422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 3673423 . T . PASS END=3673428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 3673429 . G . PASS END=3673451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,931:0,64,255:24,0 chr1 3673452 . A . PASS END=3673452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 3673453 . A . PASS END=3673454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 3677845 . G . PASS END=3677992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,86,255:40,0 chr1 3677993 . G . PASS END=3677993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:27,0 chr1 3677994 . G . PASS END=3677994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 3679184 . G . PASS END=3679186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3679187 . C . PASS END=3679188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 3679189 . G . PASS END=3679190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 3679191 . T . PASS END=3679191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 3679192 . C . PASS END=3679241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,837:0,66,255:23,0 chr1 3679242 . C . PASS END=3679246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,768:0,52,255:20,0 chr1 3679247 . C . PASS END=3679275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 3679276 . G . PASS END=3679276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 3679672 . A . PASS END=3679676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:17,0 chr1 3679677 . G . PASS END=3679677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 3679678 . G . PASS END=3679687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,570:0,51,255:18,0 chr1 3679688 . C . PASS END=3679688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 3679689 . G . PASS END=3679689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 3679690 . G . PASS END=3679690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 3679691 . C . PASS END=3679694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 3679695 . G . PASS END=3679707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,784:0,62,255:26,0 chr1 3679708 . G . PASS END=3679776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1016:0,81,255:39,0 chr1 3679777 . G . PASS END=3679779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:37,0 chr1 3679780 . G . PASS END=3679845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:42:0,88,1530:0,88,255:40,0 chr1 3679846 . G . PASS END=3679846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1549:0,78,255:33,0 chr1 3679847 . A . PASS END=3679967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:38:0,85,1240:0,85,255:40,0 chr1 3679968 . G . PASS END=3679968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:33,0 chr1 3679969 . T . PASS END=3680002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1133:0,80,255:34,0 chr1 3680003 . T . PASS END=3680003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:29,0 chr1 3680004 . G . PASS END=3680033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1011:0,84,255:31,0 chr1 3680034 . A . PASS END=3680046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:26,0 chr1 3680047 . T . PASS END=3680047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 3680048 . C . PASS END=3680053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 3680054 . G . PASS END=3680054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 3680055 . G . PASS END=3680060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 3680061 . T . PASS END=3680099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,582:0,41,255:19,0 chr1 3680100 . G . PASS END=3680100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 3680101 . G . PASS END=3680115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 3680116 . C . PASS END=3680126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:16:0,35,540:0,35,255:13,0 chr1 3680127 . C . PASS END=3680129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3680130 . T . PASS END=3680142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 3680143 . G . PASS END=3680147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 3680148 . G . PASS END=3680165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 3680166 . C . PASS END=3680167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 3680168 . G . PASS END=3680201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 3680202 . C . PASS END=3680202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 3680203 . G . PASS END=3680203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3680204 . G . PASS END=3680204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3680205 . C . PASS END=3680205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 3680206 . C . PASS END=3680206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 3680207 . C . PASS END=3680207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr1 3680208 . T . PASS END=3680212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 3680213 . T . PASS END=3680213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 3680214 . T . PASS END=3680218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:16,0 chr1 3680219 . C . PASS END=3680219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 3680220 . C . PASS END=3680226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 3680227 . G . PASS END=3680227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 3680228 . C . PASS END=3680242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,704:0,44,255:19,0 chr1 3680243 . G . PASS END=3680246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3680247 . A . PASS END=3680248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 3680249 . C . PASS END=3680260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 3680261 . T . PASS END=3680263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 3680264 . G . PASS END=3680282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:25,0 chr1 3680283 . T . PASS END=3680283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 3680284 . T . PASS END=3680296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 3680297 . T . PASS END=3680297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 3680298 . G . PASS END=3680305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 3680306 . A . PASS END=3680306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,788:0,39,255:22,0 chr1 3680307 . A . PASS END=3680307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 3680308 . G . PASS END=3680309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 3680310 . A . PASS END=3680311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 3680312 . C . PASS END=3680313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 3680314 . C . PASS END=3680320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 3680321 . G . PASS END=3680321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 3680322 . A . PASS END=3680324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 3680325 . G . PASS END=3680325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 3680326 . A . PASS END=3680329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3680330 . A . PASS END=3680330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr1 3680331 . T . PASS END=3680331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3680332 . A . PASS END=3680332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr1 3680333 . C . PASS END=3680334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:21,0 chr1 3680335 . G . PASS END=3680335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 3680336 . A . PASS END=3680340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,726:0,63,255:22,0 chr1 3680341 . G . PASS END=3680343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 3680344 . A . PASS END=3680346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 3680347 . C . PASS END=3680354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr1 3680355 . G . PASS END=3680364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 3680365 . G . PASS END=3680380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:19,0 chr1 3680381 . T . PASS END=3680383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,38,255:13,0 chr1 3680384 . A . PASS END=3680384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 3680385 . A . PASS END=3680385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:12,0 chr1 3680386 . G . PASS END=3680400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,450:0,36,255:12,0 chr1 3683099 . T . PASS END=3683176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,123,255:40,0 chr1 3683797 . C . PASS END=3683800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 3683801 . T . PASS END=3683801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 3683802 . G . PASS END=3683816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 3683817 . A . PASS END=3683817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 3683818 . A . PASS END=3683836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:26,0 chr1 3683837 . G . PASS END=3683858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1080:0,87,255:31,0 chr1 3683859 . C . PASS END=3683859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 3683860 . A . PASS END=3683874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1127:0,93,255:31,0 chr1 3683875 . C . PASS END=3683921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:65:27:0,65,984:0,65,255:27,0 chr1 3683922 . G . PASS END=3683927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3683928 . G . PASS END=3683928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 3683929 . G . PASS END=3683929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 3683930 . A . PASS END=3683953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 3683954 . T . PASS END=3683954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 3683955 . G . PASS END=3683956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3683957 . T . PASS END=3683957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 3683958 . T . PASS END=3683958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3683959 . C . PASS END=3683961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 3683962 . C . PASS END=3683962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 3683963 . A . PASS END=3684000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,737:0,60,255:26,0 chr1 3684001 . C . PASS END=3684006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:17,0 chr1 3684007 . A . PASS END=3684009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 3685144 . T . PASS END=3685161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,121,255:40,0 chr1 3686347 . C . PASS END=3686347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:34,0 chr1 3686348 . T . PASS END=3686451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:35:0,102,1312:0,105,255:40,0 chr1 3687801 . A . PASS END=3687811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,574:0,51,255:18,0 chr1 3687812 . A . PASS END=3687812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 3687840 . C . PASS END=3687884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:26,0 chr1 3687885 . G . PASS END=3688087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1185:0,80,255:40,0 chr1 3691938 . A . PASS END=3691948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:19,0 chr1 3691949 . G . PASS END=3691951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 3691952 . G . PASS END=3691958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 3691959 . G . PASS END=3691968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,894:0,64,255:26,0 chr1 3691969 . G . PASS END=3691973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3691974 . T . PASS END=3691979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3691980 . G . PASS END=3692012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:29,0 chr1 3692013 . G . PASS END=3692051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,878:0,72,255:25,0 chr1 3692359 . G . PASS END=3692441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1250:0,87,255:39,0 chr1 3692442 . T . PASS END=3692442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:32,0 chr1 3692443 . C . PASS END=3692458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:34,0 chr1 3692459 . G . PASS END=3692477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,807:0,69,255:26,0 chr1 3692478 . G . PASS END=3692478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 3692479 . C . PASS END=3692485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 3697652 . T . PASS END=3697654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 3697655 . G . PASS END=3697655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 3697656 . C . PASS END=3697666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 3697667 . C . PASS END=3697667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3697668 . A . PASS END=3697668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr1 3697669 . C . PASS END=3697670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 3697671 . T . PASS END=3697671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 3697672 . G . PASS END=3697689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:25,0 chr1 3697690 . G . PASS END=3697736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1016:0,81,255:32,0 chr1 3697737 . A . PASS END=3697737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 3697738 . C . PASS END=3697819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1208:0,89,255:34,0 chr1 3697820 . A . PASS END=3697820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:29,0 chr1 3697821 . G . PASS END=3697836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:33,0 chr1 3697837 . C . PASS END=3697851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:23,0 chr1 3697852 . A . PASS END=3697852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 3697853 . T . PASS END=3697857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 3697858 . C . PASS END=3697858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 3697859 . C . PASS END=3697860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3697861 . C . PASS END=3697862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 3697863 . T . PASS END=3697870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 3697871 . T . PASS END=3697900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,719:0,47,255:19,0 chr1 3698076 . C . PASS END=3698165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:60:0,120,1800:0,143,255:40,0 chr1 3699225 . C . PASS END=3699327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:41:0,96,1440:0,110,255:40,0 chr1 3700376 . C . PASS END=3700475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:31:0,86,1218:0,86,255:40,0 chr1 3700560 . C . PASS END=3700561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:25,0 chr1 3700562 . G . PASS END=3700562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 3700563 . T . PASS END=3700563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 3700564 . G . PASS END=3700643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1103:0,80,255:35,0 chr1 3700644 . G . PASS END=3700645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:31:0,66,1147:0,66,255:26,0 chr1 3700646 . C . PASS END=3700646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 3700647 . T . PASS END=3700647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 3700648 . T . PASS END=3700656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,89,255:29,0 chr1 3700657 . T . PASS END=3700657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 3700658 . C . PASS END=3700660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 3700661 . C . PASS END=3700675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,962:0,67,255:26,0 chr1 3701651 . C . PASS END=3701657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 3701658 . T . PASS END=3701658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 3701659 . C . PASS END=3701661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 3701662 . G . PASS END=3701662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 3701663 . T . PASS END=3701663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 3701664 . G . PASS END=3701664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 3701665 . G . PASS END=3701667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 3701668 . G . PASS END=3701668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 3701669 . C . PASS END=3701669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 3701670 . C . PASS END=3701677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:24,0 chr1 3701678 . G . PASS END=3701767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1257:0,81,255:40,0 chr1 3703413 . C . PASS END=3703417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 3703418 . A . PASS END=3703418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 3703419 . G . PASS END=3703425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 3703426 . A . PASS END=3703444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 3703445 . C . PASS END=3703445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 3703446 . T . PASS END=3703467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,939:0,65,255:25,0 chr1 3703468 . A . PASS END=3703468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,820:0,28,255:22,0 chr1 3703469 . C . PASS END=3703475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 3703476 . C . PASS END=3703482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 3703483 . A . PASS END=3703483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:30,0 chr1 3703484 . T . PASS END=3703625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:33:0,88,1321:0,88,255:40,0 chr1 3703626 . C . PASS END=3703626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1097:0,50,255:30,0 chr1 3703627 . T . PASS END=3703655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:34,0 chr1 3703656 . T . PASS END=3703657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr1 3703658 . C . PASS END=3703660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 3703661 . T . PASS END=3703679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,990:0,65,255:26,0 chr1 3703680 . G . PASS END=3703693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr1 3703694 . C . PASS END=3703701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 3703702 . C . PASS END=3703735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 3703736 . T . PASS END=3703736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 3703737 . G . PASS END=3703740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 3703741 . T . PASS END=3703741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 3703742 . G . PASS END=3703746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1186:0,93,255:31,0 chr1 3703747 . C . PASS END=3703747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 3703748 . C . PASS END=3703818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1249:0,89,255:36,0 chr1 3703819 . C . PASS END=3703840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:64:26:0,64,990:0,64,255:26,0 chr1 3703841 . T . PASS END=3703841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:21,0 chr1 3703842 . C . PASS END=3703864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 3703865 . G . PASS END=3703865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 3703866 . G . PASS END=3703873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3703874 . T . PASS END=3703874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 3712426 . C . PASS END=3712444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,568:0,40,255:19,0 chr1 3712445 . G . PASS END=3712471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 3712472 . C . PASS END=3712472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 3712473 . A . PASS END=3712474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 3712475 . T . PASS END=3712485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3712486 . C . PASS END=3712492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,736:0,63,255:21,0 chr1 3712493 . T . PASS END=3712493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 3712494 . C . PASS END=3712496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 3712497 . T . PASS END=3712560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,593:0,40,255:19,0 chr1 3712561 . G . PASS END=3712576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:14:0,33,495:0,42,255:13,0 chr1 3712577 . A . PASS END=3712579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 3712580 . C . PASS END=3712583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 3712584 . G . PASS END=3712642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 3712643 . C . PASS END=3712675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 3712676 . G . PASS END=3712677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,225:3,0 chr1 3712678 . G . PASS END=3712679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr1 3712680 . C . PASS END=3712765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr1 3712766 . C . PASS END=3712796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 3712797 . G . PASS END=3712801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:6,0 chr1 3712802 . A G, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:4,0,0:3,1,0:20:15,0,50,36,250,286:15,0,247:6,0:4.2330e-02,2.0134e+01,7.3134e+01,5.5880e+01,3.0520e+02,3.0917e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,0,1:4,3,1,0 chr1 3712803 . G . PASS END=3712823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 3712824 . C . PASS END=3712838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,227:6,0 chr1 3712839 . G . PASS END=3712871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 3712872 . C . PASS END=3712910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,374:0,30,255:12,0 chr1 3712911 . G . PASS END=3712911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 3712912 . C . PASS END=3712936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 3712937 . A . PASS END=3712937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 3712938 . C . PASS END=3712951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 3712952 . C . PASS END=3712966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 3712967 . A . PASS END=3712967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 3712968 . G . PASS END=3712971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 3712972 . C . PASS END=3712973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 3712974 . C . PASS END=3713005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 3713006 . T . PASS END=3713020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 3713021 . G . PASS END=3713028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:11:0,24,360:0,33,255:9,0 chr1 3713029 . T . PASS END=3713029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 3713030 . G . PASS END=3713031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 3713032 . C . PASS END=3713040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 3731781 . T . PASS END=3731795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,768:0,63,255:24,0 chr1 3731796 . T . PASS END=3731796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 3731797 . C . PASS END=3731809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 3731810 . G . PASS END=3731811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 3731812 . T . PASS END=3731816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 3731817 . G . PASS END=3731819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr1 3731820 . C . PASS END=3731820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 3731821 . A . PASS END=3731828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:30,0 chr1 3731829 . A . PASS END=3731829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 3731830 . A . PASS END=3731830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 3731831 . G . PASS END=3731832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr1 3731833 . G . PASS END=3731836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr1 3731837 . T . PASS END=3731837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 3731838 . G . PASS END=3731902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1140:0,80,255:33,0 chr1 3731903 . G . PASS END=3731909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 3731910 . T . PASS END=3731918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1094:0,87,255:30,0 chr1 3731919 . G . PASS END=3731921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 3731922 . A . PASS END=3731958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 3731959 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.295;ReadPosRankSum=2.443;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,14,0:0.538,0.000:26:6,6,0:6,8,0:47:85,0,47,185,185,185:255,0,255:11,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,8,6,8:4,8,6,8:3731959 chr1 3731960 . G . PASS END=3731964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr1 3731965 . G A, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.480;ReadPosRankSum=3.010;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,14,0:0.500,0.000:28:6,6,0:8,8,0:47:85,0,47,185,185,185:255,0,255:12,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,8,6,8:4,10,6,8:3731959 chr1 3731966 . T . PASS END=3731979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:24,0 chr1 3731980 . A . PASS END=3731980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 3731981 . C . PASS END=3732005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,847:0,69,255:26,0 chr1 3732006 . C . PASS END=3732017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 3732018 . G . PASS END=3732021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3732022 . G . PASS END=3732058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,64,255:26,0 chr1 3732059 . T . PASS END=3732065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 3732066 . A . PASS END=3732081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,729:0,57,255:19,0 chr1 3732824 . T . PASS END=3732842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr1 3732843 . C . PASS END=3732893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr1 3732894 . A . PASS END=3732894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 3732895 . T . PASS END=3732911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 3732912 . C . PASS END=3732912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 3732913 . C . PASS END=3732930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 3732931 . A . PASS END=3732934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 3732936 . T . PASS END=3732936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3739708 . T . PASS END=3739793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1150:0,83,255:39,0 chr1 3739794 . C . PASS END=3739794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:33,0 chr1 3739795 . C . PASS END=3739805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:92:34:0,92,1280:0,92,255:34,0 chr1 3739988 . G . PASS END=3740073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1169:0,80,255:40,0 chr1 3740074 . T . PASS END=3740074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:38,0 chr1 3740075 . T . PASS END=3740108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,88,255:39,0 chr1 3740109 . A . PASS END=3740126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 3742322 . C . PASS END=3742430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:43:0,96,1352:0,96,255:40,0 chr1 3742934 . T . PASS END=3743000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,105,1575:0,129,255:40,0 chr1 3743272 . C . PASS END=3743281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:74:0,120,1800:0,206,255:40,0 chr1 3743282 . T . PASS END=3743308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,195,255:40,0 chr1 3745479 . T . PASS END=3745519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:39:0,101,1388:0,101,255:40,0 chr1 3745520 . G . PASS END=3745535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1376:0,81,255:38,0 chr1 3745830 . C . PASS END=3745937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,136,255:40,0 chr1 3746355 . C . PASS END=3746480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:92:36:0,92,1318:0,92,255:40,0 chr1 3746481 . C . PASS END=3746498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:71:28:0,71,1039:0,71,255:26,0 chr1 3746499 . A . PASS END=3746500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3746501 . T . PASS END=3746501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 3746502 . A . PASS END=3746502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 3746503 . A . PASS END=3746507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 3746508 . A . PASS END=3746524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,826:0,64,255:26,0 chr1 3746525 . C . PASS END=3746535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:23:0,48,720:0,69,255:19,0 chr1 3746536 . C . PASS END=3746539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 3746540 . G . PASS END=3746544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:18,0 chr1 3746545 . A . PASS END=3746561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 3747610 . C . PASS END=3747618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 3747619 . G . PASS END=3747619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 3747620 . T . PASS END=3747627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,646:0,51,255:19,0 chr1 3747628 . G . PASS END=3747639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 3747640 . G . PASS END=3747640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3747641 . C . PASS END=3747646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3747647 . G . PASS END=3747656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,742:0,66,255:23,0 chr1 3747657 . C . PASS END=3747657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 3747658 . T . PASS END=3747658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr1 3747659 . T . PASS END=3747664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 3747665 . A . PASS END=3747665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 3747666 . G . PASS END=3747666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3747667 . C . PASS END=3747667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 3747668 . C . PASS END=3747673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 3747674 . A . PASS END=3747674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 3747675 . G . PASS END=3747677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,901:0,72,255:25,0 chr1 3747678 . G . PASS END=3747679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 3747680 . C . PASS END=3747681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 3747682 . C . PASS END=3747694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:28,0 chr1 3747695 . G . PASS END=3747695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr1 3747696 . C . PASS END=3747700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 3747701 . T . PASS END=3747701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 3747702 . G . PASS END=3747708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 3747709 . A . PASS END=3747709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 3747710 . G . PASS END=3747712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 3747713 . T . PASS END=3747735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,922:0,62,255:26,0 chr1 3747736 . G . PASS END=3747739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 3747740 . G . PASS END=3747740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 3747741 . A . PASS END=3747786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 3750420 . T . PASS END=3750452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:26,0 chr1 3750453 . G . PASS END=3750468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,987:0,81,255:30,0 chr1 3750469 . T . PASS END=3750469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 3750470 . C . PASS END=3750566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1190:0,86,255:40,0 chr1 3750567 . C . PASS END=3750578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 3750579 . T . PASS END=3750583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3750584 . A . PASS END=3750584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 3750585 . A . PASS END=3750585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3750586 . G . PASS END=3750599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,945:0,65,255:26,0 chr1 3751489 . G . PASS END=3751650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:30:0,84,1257:0,90,255:40,0 chr1 3751651 . A . PASS END=3751651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 3751652 . G . PASS END=3751655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 3751656 . C . PASS END=3751656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 3753059 . C . LowGQ END=3753059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,551:15,0,255:18,0 chr1 3753060 . A . PASS END=3753060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3753061 . A . PASS END=3753061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,676:0,33,255:20,0 chr1 3753062 . G . PASS END=3753062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,604:0,3,255:19,0 chr1 3753063 . G . PASS END=3753063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,654:0,13,255:21,0 chr1 3753064 . T . PASS END=3753064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:21,0 chr1 3753065 . T . PASS END=3753066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,717:0,30,255:21,0 chr1 3753067 . C . LowGQ END=3753068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,610:0,0,255:20,0 chr1 3753069 . C . PASS END=3753069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:22,0 chr1 3753070 . C . PASS END=3753070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,737:0,17,255:22,0 chr1 3753071 . C . PASS END=3753071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 3753072 . A . PASS END=3753072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:22,0 chr1 3753073 . A . PASS END=3753073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:23,0 chr1 3753074 . C . PASS END=3753074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,729:0,6,255:23,0 chr1 3753075 . A . PASS END=3753075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 3753076 . C . LowGQ END=3753076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:0:26:0,0,721:8,0,255:23,0 chr1 3753077 . A . PASS END=3753077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 3753078 . T . LowGQ END=3753080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,677:2,0,255:22,0 chr1 3753081 . A . PASS END=3753081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:25,0 chr1 3753082 . T . PASS END=3753082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 3753083 . G . PASS END=3753083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,898:0,37,255:25,0 chr1 3753084 . G . PASS END=3753084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,837:0,15,255:26,0 chr1 3753085 . C . PASS END=3753085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:26,0 chr1 3753086 . A . PASS END=3753086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:7:29:0,7,873:0,7,255:25,0 chr1 3753087 . G . PASS END=3753087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,961:0,43,255:28,0 chr1 3753088 . A . PASS END=3753090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1005:0,60,255:29,0 chr1 3753091 . T . PASS END=3753091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1010:0,24,255:29,0 chr1 3753092 . G . PASS END=3753093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 3753094 . C . PASS END=3753094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:13:31:0,13,951:0,13,255:27,0 chr1 3753095 . T . PASS END=3753095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 3753096 . T . PASS END=3753096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,830:0,37,255:29,0 chr1 3753097 . C . PASS END=3753100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:33:0,81,1172:0,81,255:37,0 chr1 3753101 . C . PASS END=3753102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr1 3753103 . A . PASS END=3753103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 3753104 . G . PASS END=3753104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:26:38:0,26,1169:0,26,255:34,0 chr1 3753105 . G . PASS END=3753106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1396:0,98,255:36,0 chr1 3753107 . C . PASS END=3753107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 3753108 . T . PASS END=3753108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1349:0,84,255:36,0 chr1 3753109 . T . PASS END=3753109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:28:39:0,28,976:0,28,255:34,0 chr1 3753110 . C . PASS END=3753115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1335:0,84,255:37,0 chr1 3753116 . T . PASS END=3753117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr1 3753118 . A . PASS END=3753119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1393:0,84,255:37,0 chr1 3753120 . G . PASS END=3753120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 3753121 . G . PASS END=3753121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1385:0,84,255:35,0 chr1 3753122 . C . PASS END=3753122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 3753123 . T . PASS END=3753123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:31:39:0,31,1163:0,31,255:34,0 chr1 3753124 . C . PASS END=3753125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 3753126 . G . PASS END=3753127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr1 3753128 . C . PASS END=3753128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1318:0,59,255:31,0 chr1 3753129 . T . PASS END=3753133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,95,255:32,0 chr1 3753134 . T . PASS END=3753134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1263:0,42,255:31,0 chr1 3753135 . A . PASS END=3753135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:31,0 chr1 3753136 . A . PASS END=3753136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 3753137 . C . PASS END=3753137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:30,0 chr1 3753138 . A . PASS END=3753139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,89,255:30,0 chr1 3753140 . G . PASS END=3753140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1164:0,28,255:29,0 chr1 3753141 . C . PASS END=3753141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:29,0 chr1 3753142 . C . PASS END=3753182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1019:0,84,255:30,0 chr1 3753183 . G . PASS END=3753183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 3753184 . G . PASS END=3753208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:32,0 chr1 3753209 . C . PASS END=3753209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 3753210 . T . PASS END=3753212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 3753213 . C . PASS END=3753213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 3753214 . G . PASS END=3753214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 3753215 . A . PASS END=3753216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 3753217 . T . PASS END=3753237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:26,0 chr1 3753238 . C . PASS END=3753247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr1 3753248 . G . PASS END=3753251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,831:0,69,255:23,0 chr1 3753252 . T . PASS END=3753256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 3753261 . A . PASS END=3753261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr1 3753852 . C . PASS END=3754076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:33:0,81,1215:0,85,255:40,0 chr1 3754077 . T . PASS END=3754083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:26,0 chr1 3755528 . C . PASS END=3755548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:26,0 chr1 3755549 . G . PASS END=3755637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:29:0,87,1086:0,87,255:40,0 chr1 3755638 . C . PASS END=3755668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,96,255:39,0 chr1 3755669 . A . PASS END=3755674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,76,255:26,0 chr1 3755675 . T C, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,16,0:0,12,0:81:169,84,0,1077,84,1077:255,84,0:0,0:1.3127e+02,8.1269e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,16:0,0,16,12 chr1 3755676 . T . PASS END=3755683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:24,0 chr1 3756170 . A . PASS END=3756170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1388:0,101,255:38,0 chr1 3756172 . C . PASS END=3756322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:38:0,98,1391:0,98,255:40,0 chr1 3756323 . G . PASS END=3756325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,97,255:26,0 chr1 3756326 . A . PASS END=3756339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,984:0,80,255:27,0 chr1 3756340 . C . PASS END=3756340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 3757715 . T . PASS END=3757733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,120,1800:0,122,255:40,0 chr1 3759719 . T . PASS END=3759730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,619:0,51,255:18,0 chr1 3759731 . C . PASS END=3759742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:24,0 chr1 3759743 . A . PASS END=3759743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 3759744 . G . PASS END=3759746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 3759747 . C . PASS END=3759774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1011:0,84,255:34,0 chr1 3759775 . G . PASS END=3759775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:33,0 chr1 3759776 . G . PASS END=3759783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 3759784 . A G, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,12,0:0,23,0:102:190,105,0,1357,105,1357:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,13,22 chr1 3759785 . C . PASS END=3759821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:35:0,96,1335:0,96,255:40,0 chr1 3759822 . A . PASS END=3759840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1365:0,84,255:37,0 chr1 3759841 . G . PASS END=3759868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,97,255:39,0 chr1 3759869 . A . PASS END=3759870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 3759871 . C . PASS END=3759871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 3759872 . C . PASS END=3759874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:38:0,60,900:0,114,255:25,0 chr1 3759875 . G . PASS END=3759886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:30:22:0,30,450:0,63,255:13,1 chr1 3759887 . G . PASS END=3759887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:27:23:0,27,405:0,34,255:9,1 chr1 3761471 . C . PASS END=3761547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,110,1430:0,110,255:40,0 chr1 3761853 . A . PASS END=3761915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:71:0,120,1800:0,213,255:40,0 chr1 3764039 . C . PASS END=3764178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:48:0,120,1800:0,126,255:40,0 chr1 3764179 . T . PASS END=3764195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 3765172 . C . PASS END=3765172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:32,0 chr1 3765173 . C . PASS END=3765173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 3765174 . A . PASS END=3765174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1195:0,66,255:33,0 chr1 3765175 . A . PASS END=3765175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 3765176 . G . PASS END=3765178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1202:0,69,255:35,0 chr1 3765179 . T . PASS END=3765189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1182:0,88,255:37,0 chr1 3765190 . T . PASS END=3765191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:64:38:0,64,1201:0,64,255:38,0 chr1 3765192 . T . PASS END=3765208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,111,1439:0,115,255:40,0 chr1 3765209 . A . PASS END=3765209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:62:44:0,62,1407:0,62,255:36,0 chr1 3765210 . A . PASS END=3765345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:41:0,87,1398:0,87,255:40,0 chr1 3768279 . T . PASS END=3768293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 3768294 . G . PASS END=3768324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 3768325 . T . PASS END=3768350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 3768351 . C . PASS END=3768366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 3768859 . C . PASS END=3768985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,149,255:40,1 chr1 3772438 . C . PASS END=3772440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 3772441 . A . PASS END=3772497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:29:0,80,1177:0,80,255:35,0 chr1 3772498 . G . PASS END=3772508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:28:0,75,1125:0,84,255:26,0 chr1 3772509 . T . PASS END=3772509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr1 3772510 . C . PASS END=3772531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,963:0,78,255:26,0 chr1 3774168 . A . PASS END=3774177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 3774178 . A . PASS END=3774178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 3774179 . G . PASS END=3774189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 3774190 . T . PASS END=3774190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 3774191 . G . PASS END=3774192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 3774193 . A . PASS END=3774193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 3774194 . G . PASS END=3774200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 3774201 . G . LowGQ END=3774201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,294:22,0,255:8,0 chr1 3774202 . C . PASS END=3774205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 3774206 . G . PASS END=3774206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 3774207 . C . PASS END=3774207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 3774208 . G . PASS END=3774208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 3774209 . C . PASS END=3774210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 3774211 . G . PASS END=3774211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 3774212 . C . PASS END=3774248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr1 3774249 . G . PASS END=3774249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 3774250 . A . PASS END=3774253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 3774254 . G . PASS END=3774254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 3774255 . C . PASS END=3774258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 3774259 . G . PASS END=3774281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 3775282 . C . PASS END=3775286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,914:0,66,255:24,0 chr1 3775287 . T . PASS END=3775287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 3775288 . G . PASS END=3775294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 3775295 . G . PASS END=3775383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1041:0,84,255:39,0 chr1 3775384 . A . PASS END=3775384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:28,0 chr1 3775385 . C . PASS END=3775393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:31,0 chr1 3775394 . A . PASS END=3775403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:23,0 chr1 3775404 . G . PASS END=3775416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:21:0,52,770:0,52,255:19,0 chr1 3775417 . C . PASS END=3775430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 3782207 . C . PASS END=3782208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:23,1 chr1 3782209 . G . PASS END=3782210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 3782211 . T . PASS END=3782211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 3782212 . G . PASS END=3782261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:23:0,64,789:0,64,255:25,0 chr1 3782262 . T . PASS END=3782262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 3782263 . G . PASS END=3782263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 3782264 . A . PASS END=3782264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 3782265 . T . PASS END=3782269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 3782270 . A . PASS END=3782271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 3782272 . G . PASS END=3782280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 3782281 . A . PASS END=3782281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 3782282 . A . PASS END=3782288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 3782289 . A . PASS END=3782289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 3782290 . A . PASS END=3782291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr1 3782292 . A . PASS END=3782292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr1 3782293 . T . PASS END=3782299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 3782300 . A . PASS END=3782300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 3782301 . G . PASS END=3782301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3782302 . A . PASS END=3782302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,748:0,58,255:22,0 chr1 3782303 . G . PASS END=3782305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 3782306 . T . PASS END=3782306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 3782307 . C . PASS END=3782315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 3782316 . A . PASS END=3782316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 3782317 . C . PASS END=3782317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 3782318 . C . PASS END=3782357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:20:0,47,638:0,47,255:20,0 chr1 3782358 . T . PASS END=3782371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,730:0,63,255:22,0 chr1 3782372 . G . PASS END=3782372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 3782373 . C . PASS END=3782380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 3782381 . A . PASS END=3782387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3782388 . T . PASS END=3782388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3782389 . C . PASS END=3782390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:19,0 chr1 3782391 . G . PASS END=3782395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 3782396 . T . PASS END=3782402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3782403 . G . PASS END=3782408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:20,0 chr1 3782409 . T . PASS END=3782409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 3782410 . T . PASS END=3782412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 3782413 . C . PASS END=3782414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3782415 . A . PASS END=3782419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 3782420 . C . PASS END=3782494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:19,0 chr1 3782495 . G . PASS END=3782497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 3782498 . C . PASS END=3782504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 3782505 . A . PASS END=3782512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 3782513 . A . PASS END=3782514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 3782515 . C . PASS END=3782518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 3782519 . A . PASS END=3782530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 3782531 . G . PASS END=3782531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 3782532 . A . PASS END=3782540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 3782541 . C . PASS END=3782562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 3782563 . A . PASS END=3782563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 3782564 . G . PASS END=3782564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 3784538 . G . PASS END=3784554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:30,0 chr1 3784555 . C . PASS END=3784555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 3784556 . A . PASS END=3784607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1130:0,80,255:34,0 chr1 3784608 . C . PASS END=3784608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr1 3784609 . C . PASS END=3784612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 3784613 . G . PASS END=3784613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 3784614 . G . PASS END=3784617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 3786169 . G . PASS END=3786172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 3786173 . G . PASS END=3786180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 3786181 . C . PASS END=3786181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 3786182 . C . PASS END=3786188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:25,0 chr1 3786189 . G A, 50.00 PASS DP=25;MQ=247.77;MQRankSum=3.672;ReadPosRankSum=1.822;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,13,0:0.520,0.000:25:9,6,0:3,7,0:48:85,0,50,436,429,865:255,0,255:12,0:5.0000e+01,6.5492e-05,5.2950e+01,4.3623e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,9,4:7,5,6,7 chr1 3786190 . G . PASS END=3786193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr1 3786194 . G . PASS END=3786204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr1 3786205 . C . PASS END=3786205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 3786206 . A . PASS END=3786208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:30,0 chr1 3786209 . A . PASS END=3786209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 3786210 . G . PASS END=3786213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 3786214 . T . PASS END=3786216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 3786217 . C . PASS END=3786226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 3786227 . T . PASS END=3786304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1202:0,83,255:40,0 chr1 3786305 . G . PASS END=3786327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,969:0,60,255:26,0 chr1 3786328 . T . PASS END=3786328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 3786329 . T . PASS END=3786334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 3786335 . G . PASS END=3786335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 3786336 . C . PASS END=3786339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 3789036 . G . PASS END=3789037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr1 3789038 . T . PASS END=3789046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1011:0,81,255:29,0 chr1 3789047 . C . PASS END=3789047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 3789048 . A . PASS END=3789054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 3789055 . G . PASS END=3789055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 3789056 . C . PASS END=3789057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 3789058 . G . PASS END=3789058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 3789059 . C . PASS END=3789067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 3789068 . A . PASS END=3789068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 3789069 . C . PASS END=3789069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:28,0 chr1 3789070 . A . PASS END=3789071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 3789072 . T . PASS END=3789072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 3789073 . C . PASS END=3789078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 3789079 . A . PASS END=3789079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1001:0,76,255:29,0 chr1 3789080 . C . PASS END=3789083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 3789084 . T . PASS END=3789084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr1 3789085 . A . PASS END=3789097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:31,0 chr1 3789098 . G . PASS END=3789098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 3789099 . A . PASS END=3789099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 3789100 . G . PASS END=3789100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr1 3789101 . C . PASS END=3789120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 3789121 . G . PASS END=3789136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,74,255:27,0 chr1 3800071 . A . PASS END=3800204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:43:0,108,1731:0,108,255:40,0 chr1 3800205 . G . PASS END=3800241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:55:0,120,1800:0,161,255:40,0 chr1 3800242 . A G, 50.00 PASS DP=55;MQ=247.84;MQRankSum=4.150;ReadPosRankSum=4.773;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,28,0:0.509,0.000:55:13,14,0:14,14,0:48:85,0,50,965,950,1914:255,0,255:27,0:5.0000e+01,6.5233e-05,5.2984e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,20,13,15:11,16,13,15 chr1 3800243 . A . PASS END=3800279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,114,1710:0,134,255:40,0 chr1 3800280 . A . PASS END=3800301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1133:0,90,255:38,0 chr1 3800302 . G . PASS END=3800303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:24,0 chr1 3800304 . G . PASS END=3800305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:30:0,51,765:0,90,255:17,0 chr1 3806524 . C . PASS END=3806605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:59:0,120,1800:0,156,255:40,1 chr1 3806606 . G . PASS END=3806637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,134,255:40,0 chr1 3807133 . C . PASS END=3807159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1274:0,91,255:40,0 chr1 3807160 . C . PASS END=3807254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:37:0,96,1440:0,103,255:40,0 chr1 3807255 . C . PASS END=3807255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:32,0 chr1 3807256 . T . PASS END=3807265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:33,0 chr1 3807266 . T . PASS END=3807278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,71,255:26,0 chr1 3807279 . T . PASS END=3807279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:25,0 chr1 3807280 . G . PASS END=3807294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 3807295 . T . PASS END=3807296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,858:0,42,255:24,0 chr1 3807297 . C . PASS END=3807297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 3807298 . T . PASS END=3807298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 3807299 . T . PASS END=3807299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:23,0 chr1 3807300 . C . PASS END=3807317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr1 3807318 . T . PASS END=3807318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr1 3807319 . G . PASS END=3807320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3807321 . G . PASS END=3807321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 3807322 . T . PASS END=3807322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 3807323 . T . PASS END=3807335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1022:0,68,255:26,0 chr1 3807336 . G . PASS END=3807337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 3807338 . C . PASS END=3807350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:25,0 chr1 3807351 . T . PASS END=3807360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 3807361 . A . PASS END=3807361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:24,0 chr1 3807362 . G . PASS END=3807387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,865:0,72,255:26,0 chr1 3807388 . G A, 44.10 PASS DP=24;MQ=250.00;MQRankSum=3.889;ReadPosRankSum=2.786;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,8,0:0.333,0.000:24:7,4,0:9,4,0:44:79,0,50,286,564,850:216,0,255:14,0:4.4098e+01,1.9078e-04,5.3000e+01,2.8607e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,7,1:7,9,5,3 chr1 3807389 . A . PASS END=3807392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 3807393 . G . PASS END=3807393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 3807394 . A . PASS END=3807413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,817:0,66,255:24,0 chr1 3807414 . G . PASS END=3807414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 3807415 . C . PASS END=3807420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,878:0,69,255:24,0 chr1 3807421 . A . PASS END=3807421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 3807422 . A . PASS END=3807425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 3807426 . C . PASS END=3807426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 3807427 . A . PASS END=3807431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 3807432 . C . PASS END=3807432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 3807433 . G . PASS END=3807439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:24,0 chr1 3807440 . G . PASS END=3807440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 3807441 . G . PASS END=3807442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 3807443 . A . PASS END=3807443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 3807444 . G . PASS END=3807453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,947:0,64,255:26,0 chr1 3807454 . G . PASS END=3807459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3807460 . A . PASS END=3807460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 3807461 . G . PASS END=3807461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 3807462 . C . PASS END=3807462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 3807463 . A . PASS END=3807463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 3807464 . A . PASS END=3807465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,836:0,70,255:26,0 chr1 3807466 . C . PASS END=3807467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 3807468 . C . PASS END=3807468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 3807469 . A . PASS END=3807472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 3807473 . T . PASS END=3807473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 3807474 . C . PASS END=3807476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 3807477 . A . PASS END=3807482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1086:0,77,255:26,0 chr1 3807483 . T . PASS END=3807496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:30:0,82,1064:0,82,255:30,0 chr1 3807497 . T . PASS END=3807497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 3807498 . T . PASS END=3807506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 3807507 . A . PASS END=3807507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 3807508 . A . PASS END=3807555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:32:0,80,1117:0,80,255:38,0 chr1 3807556 . A . PASS END=3807592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:81:36:0,81,1299:0,81,255:39,0 chr1 3807593 . G C, 154.89 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,19,0:0,17,0:105:193,108,0,1367,108,1367:255,108,0:0,0:1.5489e+02,1.0489e+02,0.0000e+00,4.5000e+02,1.3966e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,23:0,0,16,20 chr1 3807594 . T . PASS END=3807611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:29,0 chr1 3807612 . A . PASS END=3807621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 3808190 . C . PASS END=3808208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,110,1511:0,110,255:40,0 chr1 3808209 . C . PASS END=3808324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:86:43:0,86,1530:0,86,255:40,0 chr1 3808325 . A . PASS END=3808343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,96,255:33,0 chr1 3809305 . C . PASS END=3809312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 3809447 . C . PASS END=3809532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1202:0,86,255:40,0 chr1 3809533 . G . PASS END=3809533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:31,0 chr1 3809534 . C . PASS END=3809540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:32,0 chr1 3809541 . G . PASS END=3809550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:29:0,72,1080:0,82,255:25,0 chr1 3809551 . C . PASS END=3809551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:23,0 chr1 3809552 . A . PASS END=3809560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 3816736 . C . PASS END=3816736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3816737 . T . LowGQ END=3816737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,613:14,0,255:20,0 chr1 3816738 . T . PASS END=3816739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,679:0,41,255:23,0 chr1 3816740 . C . PASS END=3816741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 3816742 . G . PASS END=3816742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 3816743 . C . PASS END=3816744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,882:0,72,255:24,0 chr1 3816745 . C . PASS END=3816746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 3816747 . T . PASS END=3816748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 3816749 . A . PASS END=3816749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 3816750 . T . PASS END=3816750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,885:0,64,255:24,0 chr1 4715486 . A . PASS END=4715497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 4715498 . C . PASS END=4715499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:25,0 chr1 4715500 . G . PASS END=4715500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 4715501 . C . PASS END=4715501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 4715502 . T . PASS END=4715504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 4715505 . T . PASS END=4715514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:25,0 chr1 4771960 . C . PASS END=4771990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr1 4771991 . C . PASS END=4772015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:24,0 chr1 4772016 . T . PASS END=4772016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 4772017 . A . PASS END=4772035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,856:0,69,255:24,0 chr1 4772036 . G . PASS END=4772041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 4772042 . C . PASS END=4772045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 4772046 . C . PASS END=4772046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:19,0 chr1 4772047 . C . PASS END=4772049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 4772050 . C . PASS END=4772052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 4772053 . T C, 35.30 PASS DP=22;MQ=250.00;MQRankSum=3.291;ReadPosRankSum=3.291;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,5,0:0.227,0.000:22:8,2,0:9,3,0:35:70,0,50,179,579,758:128,0,255:15,0:3.5300e+01,1.3036e-03,5.3001e+01,1.7884e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,3,2:10,7,2,3 chr1 4772054 . G . PASS END=4772054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 4772055 . A . PASS END=4772056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 4772057 . G . PASS END=4772057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 4772058 . C . PASS END=4772073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,670:0,46,255:19,0 chr1 4772074 . G . PASS END=4772074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr1 4772075 . G . PASS END=4772075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 4772076 . A . PASS END=4772076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 4772077 . G . PASS END=4772077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 4772078 . T . PASS END=4772079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:19,0 chr1 4772080 . C . PASS END=4772080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 4772081 . T . PASS END=4772082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 4772083 . G . PASS END=4772083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 4772084 . C . PASS END=4772085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:20,0 chr1 4772086 . C . PASS END=4772087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 4772088 . T . PASS END=4772090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 4772091 . C . PASS END=4772110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:25,0 chr1 4772111 . C . PASS END=4772113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 4772114 . C . PASS END=4772115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 4772116 . G . PASS END=4772116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 4772117 . C . PASS END=4772129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1022:0,68,255:26,0 chr1 4772130 . G . PASS END=4772131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 4772132 . A . PASS END=4772132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 4772133 . G . PASS END=4772137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 4772138 . C . PASS END=4772157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:26:0,64,939:0,64,255:26,0 chr1 4772158 . C . PASS END=4772158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 4772159 . C . PASS END=4772169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,848:0,72,255:24,0 chr1 4772170 . C . PASS END=4772170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 4772171 . C . PASS END=4772178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 4772179 . G . PASS END=4772179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 4772180 . C . PASS END=4772183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 4772184 . G . PASS END=4772185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 4772186 . G . PASS END=4772186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 4772187 . T . PASS END=4772190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 4772191 . G . PASS END=4772191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 4772192 . C . PASS END=4772196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 4772197 . C . PASS END=4772246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 4772247 . A . PASS END=4772247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 4772248 . C . PASS END=4772252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 4772253 . C . PASS END=4772256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,961:0,42,255:23,0 chr1 4772257 . C . PASS END=4772276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,892:0,69,255:26,0 chr1 4772277 . G . PASS END=4772277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 4772278 . A . PASS END=4772278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 4772279 . C . PASS END=4772283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 4772284 . C . PASS END=4772285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 4772286 . A . PASS END=4772302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr1 4772303 . A . PASS END=4772303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 4772304 . A . PASS END=4772310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1015:0,84,255:28,0 chr1 4772311 . C . PASS END=4772312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 4772313 . C . PASS END=4772317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 4772318 . C . PASS END=4772318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 4772319 . T . PASS END=4772319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:26,0 chr1 4772320 . C . PASS END=4772354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 4772355 . C . PASS END=4772355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 4772356 . C . PASS END=4772361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr1 4772362 . G . PASS END=4772363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,853:0,36,255:21,0 chr1 4772364 . C . PASS END=4772365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 4772366 . C . PASS END=4772366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 4772367 . C . PASS END=4772374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 4772375 . C . PASS END=4772375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 4772376 . A . PASS END=4772379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 4772380 . C . PASS END=4772382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 4772383 . C . PASS END=4772383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 4772384 . C . PASS END=4772384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 4772385 . T . PASS END=4772438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,862:0,61,255:26,0 chr1 4772439 . G . PASS END=4772443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 4772444 . A . PASS END=4772444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 4772445 . G . PASS END=4772445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 4772446 . C . PASS END=4772447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 4772448 . G . PASS END=4772451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 4772452 . C . PASS END=4772464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:25,0 chr1 4772465 . G . PASS END=4772465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 4772466 . A . PASS END=4772501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,892:0,61,255:26,0 chr1 4772502 . C . PASS END=4772502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 4772503 . C . PASS END=4772521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 4772522 . C . PASS END=4772535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:19,0 chr1 4772536 . C . PASS END=4772546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,714:0,46,255:19,0 chr1 4772547 . T . PASS END=4772555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 4772556 . T . PASS END=4772574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,723:0,49,255:19,0 chr1 4772575 . T . PASS END=4772575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,605:0,33,255:18,0 chr1 4772576 . G . PASS END=4772577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 4772578 . G . PASS END=4772578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,1 chr1 4772579 . G . PASS END=4772581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:31:22:0,31,727:0,31,255:18,1 chr1 4772582 . GCCA G, 0.01 DRAGENIndelHardQUAL DP=22;MQ=250.00;MQRankSum=2.627;ReadPosRankSum=-0.056;FractionInformativeReads=0.864;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:16,3,0:0.158,0.000:19:7,3,0:9,0,0:28:0,13,63,48,457,493:50,0,255:17,4:7.3633e-03,2.7711e+01,8.0711e+01,8.2884e+01,4.5000e+02,4.5000e+02:0.00,15.00,18.00,34.77,49.77,37.77:7,9,2,1:8,8,2,1 chr1 4772583 . C . LowGQ END=4772586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,5:25:0:23:0,0,604:9,0,255:20,4 chr1 4772587 . C . PASS END=4772587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 4772588 . A . PASS END=4772588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 4772589 . C . PASS END=4772589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 4772590 . C . PASS END=4772596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 4772597 . A . PASS END=4772624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 4772625 . A . PASS END=4772625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:12,0 chr1 4772626 . G . PASS END=4772626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 4772627 . A . LowGQ END=4772627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,474:16,0,255:12,0 chr1 4772628 . C . PASS END=4772630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 4772631 . A . PASS END=4772631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,604:0,23,255:13,0 chr1 4772632 . G . PASS END=4772632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 4772633 . G . PASS END=4772636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:14,0 chr1 4772637 . T . PASS END=4772637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 4772638 . C . PASS END=4772640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 4772641 . C . PASS END=4772641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr1 4772642 . G . PASS END=4772645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,488:0,26,255:13,0 chr1 4772646 . C . PASS END=4772648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 4772649 . T . PASS END=4772649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:12,0 chr1 4772650 . G . PASS END=4772650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 4772651 . G . PASS END=4772652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr1 4772653 . T . PASS END=4772655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 4772656 . C . PASS END=4772656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 4772657 . C . PASS END=4772658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 4772659 . G . PASS END=4772659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 4772660 . A . PASS END=4772660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 4772661 . G . PASS END=4772661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 4772662 . A . PASS END=4772662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,44,255:14,0 chr1 4772663 . A . PASS END=4772663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 4772664 . G . PASS END=4772664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 4772665 . G . PASS END=4772665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 4772666 . A . PASS END=4772666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 4772667 . T . PASS END=4772667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 4772668 . C . PASS END=4772679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:15:0,40,537:0,40,255:18,0 chr1 4772680 . T . PASS END=4772693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:19,0 chr1 4772694 . C . PASS END=4772699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 4772700 . C . PASS END=4772700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 4772701 . C . PASS END=4772702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 4772703 . G . PASS END=4772706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 4772707 . C . PASS END=4772716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 4772717 . G A, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=1.303;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,11,0:0.524,0.000:21:5,5,0:5,6,0:48:85,0,50,365,358,722:255,0,255:10,0:5.0000e+01,6.5492e-05,5.2937e+01,3.6463e+02,3.9235e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,4,7:6,4,4,7 chr1 4772718 . G . PASS END=4772729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 4772730 . A . PASS END=4772754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 4772755 . C . PASS END=4772758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 4772759 . G . PASS END=4772759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 4829913 . G . PASS END=4830000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,180,255:40,0 chr1 4832340 . C . PASS END=4832340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 4832341 . T . PASS END=4832342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 4832343 . T . PASS END=4832346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 4832347 . C . PASS END=4832347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 4832348 . A . PASS END=4832353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 4832354 . G . PASS END=4832355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 4832356 . A . PASS END=4832359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 4832360 . C . PASS END=4832360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,864:0,47,255:25,0 chr1 4832361 . T . PASS END=4832375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 4832376 . C . PASS END=4832385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1164:0,80,255:32,0 chr1 4832386 . A . PASS END=4832386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr1 4832387 . C . PASS END=4832396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1091:0,80,255:32,0 chr1 4832397 . G . PASS END=4832397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:29,0 chr1 4832398 . G . PASS END=4832405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:30,0 chr1 4832406 . C . PASS END=4832406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:28,0 chr1 4832407 . T . PASS END=4832413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 4832414 . A . PASS END=4832414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 4832415 . C . PASS END=4832416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 4832417 . T . PASS END=4832417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:31,0 chr1 4832418 . C . PASS END=4832469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1174:0,83,255:35,0 chr1 4832470 . T . PASS END=4832470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:28,0 chr1 4832471 . A . PASS END=4832471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:28,0 chr1 4832472 . T . PASS END=4832472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:27,0 chr1 4832473 . A . PASS END=4832473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 4832474 . A . PASS END=4832474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 4832475 . C . PASS END=4832478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1163:0,80,255:27,0 chr1 4832479 . A . PASS END=4832480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,978:0,60,255:26,0 chr1 4832481 . C . PASS END=4832483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 4832484 . G . PASS END=4832484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 4832485 . C . PASS END=4832485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 4832486 . A . PASS END=4832486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 4832487 . G . PASS END=4832487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 4832488 . T . PASS END=4832489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1094:0,77,255:26,0 chr1 4832490 . T . PASS END=4832497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1066:0,82,255:30,0 chr1 4832498 . A . PASS END=4832498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 4832499 . G . PASS END=4832499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 4832500 . T . PASS END=4832500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,951:0,40,255:25,0 chr1 4832501 . G . PASS END=4832502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 4832503 . G . PASS END=4832503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 4832504 . T . PASS END=4832504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 4832505 . C . PASS END=4832505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 4832506 . A . PASS END=4832506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:24,0 chr1 4832507 . G . PASS END=4832507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 4832508 . G . PASS END=4832509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 4832510 . C . PASS END=4832516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 4832517 . G . PASS END=4832533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:24,0 chr1 4832534 . A . PASS END=4832576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 4832577 . T . PASS END=4832577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 4832578 . G . PASS END=4832585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 4834487 . A . PASS END=4834559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,113,1800:0,113,255:40,0 chr1 5923040 . C . PASS END=5923040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 5923228 . A . PASS END=5923228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 5923238 . G . PASS END=5923238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 5923299 . G . PASS END=5923299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 5923325 . T . PASS END=5923349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1185:0,80,255:33,0 chr1 5923350 . A . PASS END=5923350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,997:0,63,255:29,0 chr1 5923351 . A . PASS END=5923369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1196:0,90,255:33,0 chr1 5923370 . C . PASS END=5923370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:32,0 chr1 5923371 . T . PASS END=5923378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1189:0,99,255:33,0 chr1 5923379 . A . PASS END=5923379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr1 5923380 . T . PASS END=5923391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:31,0 chr1 5923392 . A . PASS END=5923392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:26,0 chr1 5923393 . G . PASS END=5923394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr1 5923395 . A . PASS END=5923395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:27,0 chr1 5923396 . T . PASS END=5923411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:31,0 chr1 5923412 . T . PASS END=5923412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:26,0 chr1 5923413 . C . PASS END=5923416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 5923417 . G . PASS END=5923427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 5923428 . A . PASS END=5923429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,64,255:19,0 chr1 5923430 . C . PASS END=5923434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 5923435 . A . PASS END=5923439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:20:0,57,855:0,60,255:19,0 chr1 5923440 . A . PASS END=5923440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 5923441 . T . PASS END=5923457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:18,0 chr1 5923458 . C . PASS END=5923458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 5923459 . C . PASS END=5923465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 5923476 . G . PASS END=5923476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 5923950 . C . PASS END=5923962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 5923963 . T . PASS END=5923963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 5923964 . C . PASS END=5923967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:17,0 chr1 5923968 . G . PASS END=5923968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 5923969 . A . PASS END=5923972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 5923973 . G . PASS END=5923973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 5923974 . C . PASS END=5923978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 5923979 . G . PASS END=5923979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 5923980 . C . PASS END=5923997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr1 5923998 . C . PASS END=5924016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 5924017 . G . PASS END=5924073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:19,0 chr1 5924074 . G . PASS END=5924079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 5924080 . A . PASS END=5924080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 5924081 . T . PASS END=5924093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 5924398 . C . PASS END=5924398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 5924399 . T . PASS END=5924400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 5924401 . G . PASS END=5924406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 5924407 . G . PASS END=5924407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 5924408 . A . PASS END=5924408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:22,0 chr1 5924409 . G . PASS END=5924409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 5924410 . C . PASS END=5924410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 5924411 . G . PASS END=5924411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 5924412 . G . PASS END=5924418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 5924419 . G . PASS END=5924419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 5924420 . C . PASS END=5924434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 5924435 . A . PASS END=5924438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 5924439 . A . PASS END=5924439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 5924440 . G . PASS END=5924443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 5924444 . G . PASS END=5924444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 5924445 . C . PASS END=5924446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 5924447 . A . PASS END=5924457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:26,0 chr1 5924458 . G . PASS END=5924458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:25,0 chr1 5924459 . C . PASS END=5924459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 5924460 . A . PASS END=5924460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 5924461 . A . PASS END=5924463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 5924464 . C . PASS END=5924472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1045:0,81,255:29,0 chr1 5924473 . C . PASS END=5924480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 5924481 . G . PASS END=5924481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 5924482 . A . PASS END=5924482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,895:0,57,255:26,0 chr1 5924483 . T . PASS END=5924489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,910:0,81,255:27,0 chr1 5924490 . A . PASS END=5924511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,68,255:26,0 chr1 5924512 . C . PASS END=5924514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 5924515 . C . PASS END=5924520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr1 5924521 . A . PASS END=5924522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:20,0 chr1 5924523 . C . PASS END=5924523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 5924524 . A . PASS END=5924524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 5924525 . T . PASS END=5924526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 5924527 . C . PASS END=5924561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:20,0 chr1 5924562 . C . PASS END=5924573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,504:0,39,255:13,0 chr1 5924574 . C . PASS END=5924577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,405:0,22,255:9,0 chr1 5924584 . G . PASS END=5924584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 5925162 . C . PASS END=5925168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:12,0 chr1 5925169 . T . PASS END=5925169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 5925170 . C . PASS END=5925183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,413:0,36,255:13,0 chr1 5925184 . G . PASS END=5925187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 5925188 . A . PASS END=5925188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 5925189 . A . PASS END=5925197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,576:0,45,255:16,0 chr1 5925198 . T . PASS END=5925198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 5925199 . T . PASS END=5925241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,598:0,48,255:19,0 chr1 5925242 . T . PASS END=5925253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 5925254 . C . PASS END=5925283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr1 5925284 . A . PASS END=5925285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 5925286 . T . PASS END=5925287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 5925288 . G . PASS END=5925302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 5925303 . C . PASS END=5925329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 5925330 . A . PASS END=5925333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 5925348 . G . PASS END=5925348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 5926432 . C . PASS END=5926518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:40:0,90,1426:0,90,255:40,0 chr1 5927090 . C . PASS END=5927175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,103,1300:0,103,255:40,0 chr1 5927800 . C . PASS END=5927909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,82,255:40,0 chr1 5927910 . A . PASS END=5927910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 5927911 . G . PASS END=5927916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:28,0 chr1 5927917 . G . PASS END=5927917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:27,0 chr1 5927918 . C . PASS END=5927918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 5927919 . A . PASS END=5927941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,933:0,62,255:26,0 chr1 5927942 . C . PASS END=5927944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 5927945 . T . PASS END=5927945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 5927946 . C . PASS END=5927952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 5927953 . A . PASS END=5927956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:25,0 chr1 5933312 . C . PASS END=5933315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,915:0,78,255:26,0 chr1 5933316 . G . PASS END=5933317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 5933318 . G . PASS END=5933318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 5933319 . T . PASS END=5933319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 5933320 . G . PASS END=5933323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 5933324 . A . PASS END=5933324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 5933325 . G . PASS END=5933330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 5933331 . A . PASS END=5933331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:27,0 chr1 5933332 . C . PASS END=5933342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 5933343 . T . PASS END=5933343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 5933344 . T . PASS END=5933361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:29,0 chr1 5933362 . C . PASS END=5933362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 5933363 . C . PASS END=5933380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1032:0,87,255:29,0 chr1 5933381 . C . PASS END=5933395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,854:0,61,255:25,0 chr1 5934526 . C . PASS END=5934526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 5934531 . C . PASS END=5934539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr1 5934540 . G . PASS END=5934564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,243:0,21,243:8,0 chr1 5934565 . T . PASS END=5934565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 5934566 . G . PASS END=5934578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 5934579 . G . PASS END=5934586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 5934587 . C . PASS END=5934634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 5934635 . G . PASS END=5934642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 5934643 . A . PASS END=5934643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 5934644 . T . PASS END=5934717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 5934721 . G . PASS END=5934721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 5934934 . C . PASS END=5934936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 5934937 . A . PASS END=5934961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:24,0 chr1 5934962 . T . PASS END=5934962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 5934963 . C . PASS END=5934970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 5934971 . G . PASS END=5934972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 5934973 . T . PASS END=5934973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 5934974 . G . PASS END=5934974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 5934975 . T . PASS END=5934975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 5934976 . G . PASS END=5935000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1205:0,86,255:34,0 chr1 5935001 . A . PASS END=5935001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,922:0,65,255:31,0 chr1 5935002 . C . PASS END=5935005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:34,0 chr1 5935006 . A . PASS END=5935006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1209:0,64,255:33,0 chr1 5935007 . A . PASS END=5935052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1133:0,80,255:35,0 chr1 5935053 . G . PASS END=5935053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 5935054 . A . PASS END=5935124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1260:0,92,255:39,0 chr1 5935125 . G . PASS END=5935146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1141:0,84,255:30,0 chr1 5935147 . A . PASS END=5935160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,71,255:26,0 chr1 5936581 . T . PASS END=5936581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 5936582 . T . PASS END=5936582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr1 5936583 . A . PASS END=5936583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 5937150 . T . PASS END=5937150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 5937153 . C . PASS END=5937157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 5937158 . C . PASS END=5937158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 5937159 . G . PASS END=5937163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 5937164 . T . PASS END=5937167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 5937168 . G A, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.843;ReadPosRankSum=1.191;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,6,0:0.500,0.000:12:3,2,0:3,4,0:48:85,0,50,214,214,429:197,0,197:6,0:5.0000e+01,6.5233e-05,5.3000e+01,2.1448e+02,2.4898e+02,4.3172e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,1,4,2:2,4,2,4 chr1 5937169 . C . PASS END=5937188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 5937189 . G . PASS END=5937189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 5937190 . G . PASS END=5937191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:14:0,32,540:0,32,255:14,0 chr1 5937192 . C . PASS END=5937194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 5937195 . C . PASS END=5937202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 5937203 . G . PASS END=5937203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:13,0 chr1 5937204 . C . PASS END=5937205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 5937206 . C . PASS END=5937278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 5937279 . C . PASS END=5937290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 5937291 . G . PASS END=5937321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:15,0 chr1 5937322 . A . PASS END=5937336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 5937337 . T . PASS END=5937340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 5937341 . C . PASS END=5937348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:10,0 chr1 5937349 . A . PASS END=5937353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 5937354 . T . PASS END=5937358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 5937363 . G . PASS END=5937363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 5939565 . T . PASS END=5939566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1247:0,89,255:34,0 chr1 5939567 . A . PASS END=5939567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:34,0 chr1 5939568 . G . PASS END=5939581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:38:0,87,1329:0,87,255:40,0 chr1 5939582 . T . PASS END=5939692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,102,1502:0,102,255:40,2 chr1 5940173 . C . PASS END=5940299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:42:0,86,1395:0,86,255:40,0 chr1 5947337 . G . PASS END=5947337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 5947346 . C . PASS END=5947373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:26,0 chr1 5947374 . G . PASS END=5947481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1031:0,81,255:40,0 chr1 5947482 . C . PASS END=5947483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 5947484 . C . PASS END=5947488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 5947489 . G . PASS END=5947512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 5947513 . T . PASS END=5947513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 5947514 . G . PASS END=5947522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 5947523 . G . PASS END=5947523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 5947524 . A . PASS END=5947526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 5948638 . T . PASS END=5948639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 5948640 . A . PASS END=5948666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 5948667 . T . PASS END=5948667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,711:0,55,255:21,0 chr1 5948668 . C . PASS END=5948670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 5950923 . G . PASS END=5950923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 5950927 . C . PASS END=5950932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:25,0 chr1 5950933 . T . PASS END=5950933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 5950934 . C . PASS END=5950934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 5950935 . T . PASS END=5950935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 5950936 . G . PASS END=5950936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 5950937 . G . PASS END=5950940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 5950941 . G . PASS END=5950941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1030:0,43,255:28,0 chr1 5950942 . C . PASS END=5950943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 5950944 . G . PASS END=5950944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 5950945 . C . PASS END=5950967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1125:0,80,255:35,0 chr1 5950968 . T . PASS END=5950968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:53:38:0,53,1258:0,53,255:34,0 chr1 5950969 . C . PASS END=5950988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1310:0,81,255:38,0 chr1 5950989 . T . PASS END=5950989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,0 chr1 5950990 . G . PASS END=5951013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:37:0,82,1364:0,82,255:40,0 chr1 5951014 . G . PASS END=5951014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:35,0 chr1 5951015 . G . PASS END=5951028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1316:0,81,255:38,0 chr1 5951029 . G . PASS END=5951029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr1 5951030 . C . PASS END=5951057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:33:0,83,1224:0,83,255:35,0 chr1 5951058 . A . PASS END=5951058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:27,0 chr1 5951059 . C . PASS END=5951062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:28,0 chr1 5951063 . G . PASS END=5951063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,1000:0,32,255:25,0 chr1 5951064 . T . PASS END=5951066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:27,0 chr1 5951067 . C . PASS END=5951077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,74,255:25,0 chr1 5951078 . G . PASS END=5951078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 5951079 . C . PASS END=5951080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 5951081 . A . PASS END=5951086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 5951087 . C . PASS END=5951087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 5951088 . C . PASS END=5951088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:19,0 chr1 5964677 . C . PASS END=5964677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 5964678 . A . PASS END=5964680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:23,0 chr1 5964681 . A . PASS END=5964681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 5964682 . T . PASS END=5964689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,856:0,64,255:26,0 chr1 5964690 . G . PASS END=5964690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 5964691 . C . PASS END=5964691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 5964692 . C . PASS END=5964846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:27:0,80,972:0,80,255:40,0 chr1 5964847 . C . PASS END=5964863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:24,0 chr1 5964864 . T . PASS END=5964864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 5965345 . G . PASS END=5965345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 5965352 . C . PASS END=5965361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 5965362 . C . PASS END=5965362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 5965363 . A . PASS END=5965378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,853:0,61,255:26,0 chr1 5965379 . A . PASS END=5965379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:25,0 chr1 5965380 . T . PASS END=5965380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 5965381 . C . PASS END=5965388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1062:0,87,255:30,0 chr1 5965389 . T . PASS END=5965389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 5965390 . T . PASS END=5965395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 5965396 . A . PASS END=5965396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1036:0,57,255:31,0 chr1 5965397 . C . PASS END=5965427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1188:0,89,255:36,0 chr1 5965428 . T . PASS END=5965428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:34,0 chr1 5965429 . C . PASS END=5965472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1260:0,81,255:35,0 chr1 5965473 . C . PASS END=5965473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 5965474 . A . PASS END=5965492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 5965493 . C . PASS END=5965500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 5965501 . C . PASS END=5965501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 5965502 . T . PASS END=5965531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:26,0 chr1 5965532 . T . PASS END=5965535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 5965536 . C . PASS END=5965538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 5965539 . C . PASS END=5965543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,62,255:18,0 chr1 5965548 . G . PASS END=5965548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 5965692 . C . PASS END=5965843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,117,1755:0,135,255:40,0 chr1 5967175 . T . PASS END=5967184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 5967185 . G . PASS END=5967223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:18,0 chr1 5967224 . C . PASS END=5967224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 5967225 . T . PASS END=5967225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 5967226 . G . PASS END=5967226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 5967227 . G . PASS END=5967229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 5967230 . A . PASS END=5967230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 5967231 . A . PASS END=5967231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 5967232 . G . PASS END=5967232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 5967233 . C . PASS END=5967252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 5967253 . C . PASS END=5967253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 5967254 . G . PASS END=5967261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr1 5967262 . C . PASS END=5967262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 5967263 . G . PASS END=5967271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 5967272 . G . PASS END=5967272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 5967273 . A . PASS END=5967282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 5969212 . C . PASS END=5969213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 5969214 . C . PASS END=5969214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 5969215 . T . PASS END=5969217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 5969218 . T . PASS END=5969219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 5969220 . C . PASS END=5969244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,947:0,72,255:25,0 chr1 5969245 . G . PASS END=5969245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 5969246 . A . PASS END=5969273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,856:0,75,255:25,0 chr1 5969281 . G . PASS END=5969281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 5987709 . T . PASS END=5987716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,718:0,69,255:25,0 chr1 5987717 . G . PASS END=5987717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 5987718 . A . PASS END=5987728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:28,0 chr1 5987729 . T . PASS END=5987729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 5987730 . T . PASS END=5987809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1023:0,80,255:32,0 chr1 5987810 . A . PASS END=5987810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 5987811 . A . PASS END=5987812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 5987813 . T . PASS END=5987832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,74,255:26,0 chr1 5987833 . C . PASS END=5987847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 5993207 . C . PASS END=5993215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr1 5993216 . G . PASS END=5993237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:25,0 chr1 5993238 . T . PASS END=5993315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1016:0,81,255:36,0 chr1 5993316 . A . PASS END=5993316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 5993317 . G . PASS END=5993317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 5993318 . C . PASS END=5993318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 5993319 . A . PASS END=5993321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 5993322 . G . PASS END=5993323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 5993324 . G . PASS END=5993343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 5993344 . C . PASS END=5993370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 5993371 . G . PASS END=5993371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 5993372 . A . PASS END=5993374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 5993375 . G . PASS END=5993375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 5993376 . G . PASS END=5993376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 5993377 . T . PASS END=5993377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 5993378 . G . PASS END=5993378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 5993379 . A . PASS END=5993379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:20,0 chr1 5993380 . C . PASS END=5993381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 5993382 . G . PASS END=5993382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 5993383 . A . PASS END=5993385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 5993386 . C . PASS END=5993386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 5993387 . T . PASS END=5993388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 5993389 . C . PASS END=5993389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 5993397 . T . PASS END=5993398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 6007164 . A . PASS END=6007164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 6007165 . T . PASS END=6007203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,737:0,60,255:26,0 chr1 6007204 . A . PASS END=6007207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 6007208 . G . PASS END=6007290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,823:0,62,255:26,0 chr1 6008130 . C . PASS END=6008136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:30,0 chr1 6008137 . T . PASS END=6008137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 6008138 . G . PASS END=6008160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1151:0,86,255:36,0 chr1 6008161 . T . PASS END=6008161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:36,0 chr1 6008162 . G . PASS END=6008277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1225:0,89,255:40,0 chr1 6008278 . T . PASS END=6008278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1070:0,44,255:28,0 chr1 6008279 . C . PASS END=6008280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr1 6008281 . C . PASS END=6008281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 6008282 . C . PASS END=6008288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:27,0 chr1 6008289 . C . PASS END=6008292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1100:0,77,255:26,0 chr1 6008293 . C . PASS END=6008298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 6008299 . G . PASS END=6008311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:26:0,66,990:0,67,255:27,0 chr1 6012760 . C . PASS END=6012763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 6012764 . T . PASS END=6012764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 6012765 . G . PASS END=6012766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6012767 . A . PASS END=6012767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:20,0 chr1 6012768 . A . PASS END=6012778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:25,0 chr1 6012779 . A . PASS END=6012779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 6012780 . C . PASS END=6012850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,880:0,61,255:26,0 chr1 6012851 . T . PASS END=6012851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:21,0 chr1 6012852 . G . PASS END=6012853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 6012854 . C . PASS END=6012892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 6012893 . T . PASS END=6012893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 6012894 . C . PASS END=6012896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 6021845 . C . PASS END=6021845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 6021854 . C . PASS END=6022005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:29:0,81,1215:0,81,255:40,0 chr1 6022006 . T . PASS END=6022006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:27,0 chr1 6022007 . T . PASS END=6022009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:28,0 chr1 6027359 . G . PASS END=6027379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,812:0,61,255:26,0 chr1 6027380 . G . PASS END=6027380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 6027381 . C . PASS END=6027423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:26,0 chr1 6029147 . C . PASS END=6029296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,89,255:40,0 chr1 6029297 . A . PASS END=6029297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 6029298 . G . PASS END=6029303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1215:0,84,255:27,0 chr1 6029304 . T . PASS END=6029320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 6029323 . C . PASS END=6029324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 6038324 . G . PASS END=6038324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr1 6038330 . C . PASS END=6038462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1211:0,83,255:40,0 chr1 6038463 . T . PASS END=6038469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 6038470 . C . PASS END=6038473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:28:0,51,765:0,84,255:19,0 chr1 6038485 . C . PASS END=6038485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 6046200 . A . PASS END=6046200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 6046208 . T . PASS END=6046208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 6046215 . C . PASS END=6046219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1086:0,87,255:33,0 chr1 6046220 . T . PASS END=6046220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 6046221 . A . PASS END=6046349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:34:0,95,1319:0,95,255:40,0 chr1 6046357 . G . PASS END=6046357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr1 6052317 . C . PASS END=6052317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 6052355 . T . PASS END=6052355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6052467 . G . PASS END=6052467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,657:0,19,255:19,0 chr1 6052471 . G . PASS END=6052471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6052490 . C . PASS END=6052490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6052500 . C . PASS END=6052502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 6100629 . A . PASS END=6100630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 6100631 . G . PASS END=6100632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr1 6100633 . A . PASS END=6100640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 6100641 . T . PASS END=6100645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6100646 . G . PASS END=6100648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6100649 . G . PASS END=6100651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6100652 . C . PASS END=6100684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1111:0,87,255:31,0 chr1 6100685 . C . PASS END=6100703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr1 6100704 . A . PASS END=6100705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 6101891 . T . PASS END=6101932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,102,1668:0,102,255:40,0 chr1 6111571 . T . PASS END=6111605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:19,0 chr1 6111606 . A . PASS END=6111632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,837:0,66,255:23,0 chr1 6111633 . G . PASS END=6111633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 6111634 . T . PASS END=6111653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 6111654 . G . PASS END=6111746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,978:0,80,255:32,0 chr1 6111747 . A . PASS END=6111747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 6111748 . G . PASS END=6111750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 6111751 . T . PASS END=6111753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 6111754 . T . PASS END=6111768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 6111769 . T . PASS END=6111791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 6111792 . C . PASS END=6111798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:18,0 chr1 6111799 . C . PASS END=6111811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:12:0,33,495:0,36,255:12,0 chr1 6111812 . T . PASS END=6111814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 6126125 . A . PASS END=6126170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,607:0,48,255:17,0 chr1 6126171 . G . PASS END=6126172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 6126173 . C . PASS END=6126173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 6126174 . C . PASS END=6126196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 6126197 . G . PASS END=6126197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 6126198 . C . PASS END=6126203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6126204 . G . PASS END=6126207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 6126208 . T C, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.204;ReadPosRankSum=1.524;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:6,2,0:1,5,0:48:85,0,50,250,250,501:221,0,229:6,0:5.0000e+01,6.5233e-05,5.3000e+01,2.5036e+02,2.8516e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,3,4:5,2,4,3 chr1 6126209 . C . PASS END=6126237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 6126238 . C . PASS END=6126245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6126246 . C . PASS END=6126248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6126249 . T . PASS END=6126249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 6126250 . G . PASS END=6126258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6126259 . G . PASS END=6126270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 6126271 . G . PASS END=6126285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 6126286 . C . PASS END=6126326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 6126327 . T . PASS END=6126336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,125:3,0 chr1 6132815 . G . PASS END=6132815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6132816 . A . PASS END=6132816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 6132817 . A . PASS END=6132847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1148:0,87,255:32,0 chr1 6132848 . C . PASS END=6132848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 6132849 . C . PASS END=6132851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 6132852 . G . PASS END=6132852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 6132853 . G . PASS END=6132858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 6133414 . C . PASS END=6133414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 6133415 . A . PASS END=6133432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1351:0,84,255:37,0 chr1 6133433 . C . PASS END=6133433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1191:0,45,255:31,0 chr1 6133434 . T . PASS END=6133444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1272:0,92,255:36,0 chr1 6133793 . G . PASS END=6133796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6133797 . A . PASS END=6133797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 6133798 . T . PASS END=6133801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,892:0,66,255:23,0 chr1 6133802 . T . PASS END=6133802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 6133803 . G . PASS END=6133812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:24,0 chr1 6133813 . G . PASS END=6133817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 6133818 . G . PASS END=6133826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 6133827 . T . PASS END=6133827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 6133828 . G . PASS END=6133830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6142255 . A . PASS END=6142256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,117,1755:0,120,255:40,0 chr1 6142257 . G . PASS END=6142257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1259:0,79,255:39,0 chr1 6142258 . G . PASS END=6142270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,115,1516:0,115,255:40,0 chr1 6142271 . T . PASS END=6142307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:45:0,85,1467:0,85,255:40,0 chr1 6142308 . T C, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.588;ReadPosRankSum=0.629;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,30,0:0.508,0.000:59:20,18,0:9,12,0:48:85,0,50,977,1036,2014:255,0,255:26,0:5.0000e+01,6.5233e-05,5.3003e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,17,15,15:17,12,21,9 chr1 6142309 . A . PASS END=6142345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:48:0,86,1701:0,86,255:40,0 chr1 6142346 . T . PASS END=6142401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,110,1496:0,110,255:40,0 chr1 6142402 . C . PASS END=6142438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:35:0,90,1349:0,95,255:40,0 chr1 6142439 . C T,A, 50.00 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=3.427;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,18,1,0:0.514,0.029,0.000:35:10,13,1,0:6,5,0,0:48:85,0,50,499,533,549,513,540,1038,1052:255,0,255:13,0:5.0000e+01,6.5751e-05,5.2890e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:3,13,10,9:3,13,9,10 chr1 6142440 . C . PASS END=6142463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1150:0,80,255:32,0 chr1 6142464 . A . PASS END=6142464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 6142465 . C . PASS END=6142470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr1 6145264 . G . PASS END=6145312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:40:0,84,1260:0,107,255:40,0 chr1 6145800 . G . PASS END=6145810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 6145811 . C . PASS END=6145811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:15,0 chr1 6145812 . G . PASS END=6145821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,613:0,40,255:19,0 chr1 6145822 . C . PASS END=6145824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 6145825 . C . PASS END=6145825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 6145826 . G . PASS END=6145843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:24,0 chr1 6145844 . C . PASS END=6145848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6145849 . A . PASS END=6145849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 6145850 . G . PASS END=6145850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6145851 . A . PASS END=6145851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,772:0,58,255:21,0 chr1 6145852 . G . PASS END=6145854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 6145855 . T . PASS END=6145856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 6145857 . T . PASS END=6145864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 6145865 . A . PASS END=6145865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:23,0 chr1 6145866 . C . PASS END=6145880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 6145881 . T C, 42.80 PASS DP=26;MQ=247.35;MQRankSum=2.942;ReadPosRankSum=2.243;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,8,0:0.320,0.000:25:7,2,0:10,6,0:42:78,0,50,278,600,878:219,0,255:15,0:4.2805e+01,2.4955e-04,5.3000e+01,2.7807e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,11,4,4:10,7,4,4 chr1 6145882 . A . PASS END=6145898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 6145899 . C . PASS END=6145901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6145902 . C . PASS END=6145903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6145904 . A . PASS END=6145905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6145906 . T . PASS END=6145906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:26,0 chr1 6145907 . C . PASS END=6145912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6145913 . A . PASS END=6145913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 6145914 . T . PASS END=6145918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 6145919 . C . PASS END=6145921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 6145922 . C . PASS END=6145951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,922:0,62,255:26,0 chr1 6145952 . C . PASS END=6145952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 6145953 . T . PASS END=6145972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 6145973 . C . PASS END=6145973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 6145974 . A . PASS END=6145976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 6145977 . G . PASS END=6145986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 6145987 . C . PASS END=6146011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,637:0,40,255:18,0 chr1 6146012 . A . PASS END=6146012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 6146013 . A . PASS END=6146018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:16,0 chr1 6146019 . C . PASS END=6146019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 6146020 . A . PASS END=6146034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 6146035 . C . PASS END=6146047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 6146048 . C . PASS END=6146048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6146049 . A . PASS END=6146049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 6146050 . G . PASS END=6146050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 6146051 . G . PASS END=6146051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:12,0 chr1 6146052 . A . PASS END=6146066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 6146067 . C . PASS END=6146067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 6146068 . C . PASS END=6146080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 6146081 . C . PASS END=6146081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 6146082 . T . PASS END=6146085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 6146086 . C . PASS END=6146086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 6146087 . C . PASS END=6146087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:9,0 chr1 6146088 . A . PASS END=6146088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 6146089 . C . PASS END=6146092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 6146093 . G . PASS END=6146093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 6146094 . G . PASS END=6146097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 6146098 . C . PASS END=6146099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 6146100 . A . PASS END=6146109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 6146218 . A . PASS END=6146231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 6146232 . G . PASS END=6146260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 6146261 . C . PASS END=6146261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 6146262 . C . PASS END=6146272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 6146273 . C . PASS END=6146273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 6146274 . A . PASS END=6146284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 6146285 . C . PASS END=6146286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr1 6146287 . G . PASS END=6146293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 6146294 . G . PASS END=6146294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr1 6146295 . G . PASS END=6146309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,203:0,21,203:7,0 chr1 6146310 . C . PASS END=6146310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 6146311 . T . PASS END=6146311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 6146312 . C . PASS END=6146321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,180:0,18,180:6,0 chr1 6146322 . T . PASS END=6146322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,178:0,4,178:6,0 chr1 6146323 . T . PASS END=6146328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 6146329 . C . PASS END=6146336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,197:6,0 chr1 6146337 . C . PASS END=6146337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:4,0 chr1 6146338 . C . PASS END=6146339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:5,0 chr1 6146340 . C . PASS END=6146340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 6146341 . T . PASS END=6146342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr1 6146343 . G . PASS END=6146343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr1 6146344 . T . PASS END=6146344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 6146345 . C . PASS END=6146345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 6146346 . C . PASS END=6146356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,127:0,15,127:5,0 chr1 6146357 . G . LowGQ END=6146357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr1 6146358 . T . PASS END=6146366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,127:0,15,127:5,0 chr1 6146367 . A . LowGQ END=6146367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr1 6146368 . A . PASS END=6146371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:4,0 chr1 6146372 . T . LowGQ END=6146374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,135:0,0,140:3,0 chr1 6147527 . G . PASS END=6147539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:26,0 chr1 6147540 . G . PASS END=6147543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 6147544 . T . PASS END=6147544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 6147545 . C . PASS END=6147545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 6147546 . A . PASS END=6147546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6147547 . C . PASS END=6147552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6147553 . A . PASS END=6147571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:26,0 chr1 6149020 . G . PASS END=6149038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:19,0 chr1 6149039 . A . PASS END=6149039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 6149040 . C . PASS END=6149041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 6149042 . T . PASS END=6149042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 6149043 . C . PASS END=6149071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:25,0 chr1 6149072 . G . PASS END=6149074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 6149075 . A . PASS END=6149111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:26,0 chr1 6150449 . G . PASS END=6150463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:18,0 chr1 6150464 . T . PASS END=6150464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 6150465 . G . PASS END=6150484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,658:0,54,255:19,0 chr1 6150485 . A . PASS END=6150487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 6150488 . T . PASS END=6150488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 6150489 . G . PASS END=6150529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,748:0,66,255:24,0 chr1 6150530 . T . PASS END=6150530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,717:0,55,255:20,0 chr1 6150531 . G . PASS END=6150535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 6151323 . G . PASS END=6151367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,138,255:40,0 chr1 6154460 . A . PASS END=6154474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1263:0,89,255:38,0 chr1 6154475 . T . PASS END=6154475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1296:0,67,255:36,0 chr1 6154476 . G . PASS END=6154546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1296:0,100,255:40,0 chr1 6154547 . T . PASS END=6154547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:30,0 chr1 6154548 . A . PASS END=6154569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1194:0,83,255:33,0 chr1 6154570 . G . PASS END=6154607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 6154608 . A . PASS END=6154608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 6154609 . G . PASS END=6154637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,862:0,62,255:24,0 chr1 6154638 . T . PASS END=6154638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 6154639 . T . PASS END=6154646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 6154647 . A . PASS END=6154647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 6154648 . A . PASS END=6154649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 6154650 . T . PASS END=6154650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 6154651 . G . PASS END=6154652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6154653 . A . PASS END=6154653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 6154654 . C . PASS END=6154669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,813:0,66,255:23,0 chr1 6154670 . A . PASS END=6154671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,760:0,52,255:19,0 chr1 6155383 . G . PASS END=6155384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6155385 . G . PASS END=6155423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:26,0 chr1 6155424 . C . PASS END=6155438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:28,0 chr1 6155439 . T . PASS END=6155439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 6155440 . G . PASS END=6155448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:31,0 chr1 6155449 . A . PASS END=6155503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,773:0,65,255:25,0 chr1 6155590 . G . PASS END=6155616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1329:0,98,255:40,0 chr1 6155617 . T . PASS END=6155617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:38,0 chr1 6155618 . G . PASS END=6155644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:40:0,93,1430:0,93,255:40,0 chr1 6155645 . C . PASS END=6155645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:22:46:0,22,1512:0,22,255:37,0 chr1 6155646 . G . PASS END=6155681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:31:0,87,1074:0,93,255:39,0 chr1 6155682 . A . PASS END=6155682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 6155683 . A . PASS END=6155684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 6156696 . G . PASS END=6156712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,962:0,78,255:26,0 chr1 6156713 . G . PASS END=6156716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 6156717 . A . PASS END=6156726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 6156727 . G . PASS END=6156733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 6156734 . G . PASS END=6156734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 6156735 . G . PASS END=6156751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:29,0 chr1 6156752 . C . PASS END=6156779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,963:0,75,255:26,0 chr1 6156780 . G . PASS END=6156780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 6156781 . A . PASS END=6156784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 6156785 . C . PASS END=6156802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr1 6156803 . C . PASS END=6156803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:14,0 chr1 6156804 . C . PASS END=6156810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr1 6156811 . C . PASS END=6156811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 6156812 . C . PASS END=6156813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6156814 . T . PASS END=6156814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 6156815 . A . PASS END=6156816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6157329 . C . PASS END=6157329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 6157330 . C . PASS END=6157396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:37:0,98,1349:0,98,255:40,0 chr1 6157397 . G . PASS END=6157433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,107,1458:0,107,255:40,0 chr1 6157434 . C T, 164.37 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,25,0:0,14,0:114:202,117,0,1496,117,1496:255,117,0:0,0:1.6437e+02,1.1437e+02,0.0000e+00,4.5000e+02,1.4914e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,24:0,0,19,20 chr1 6157435 . T . PASS END=6157471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1376:0,101,255:38,0 chr1 6157472 . C . PASS END=6157482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1257:0,89,255:34,0 chr1 6157483 . C . PASS END=6157507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:22:0,60,900:0,66,255:22,0 chr1 6157508 . T . PASS END=6157538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:19,0 chr1 6157539 . A . PASS END=6157547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 6157548 . G . PASS END=6157548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:10,0 chr1 6157549 . T . PASS END=6157551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 6157552 . T . PASS END=6157558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 6157559 . G . PASS END=6157559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 6157560 . G . PASS END=6157576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr1 6157577 . C . PASS END=6157577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 6157578 . A . PASS END=6157580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 6157581 . A . PASS END=6157581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 6157582 . A . PASS END=6157591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 6158545 . G . PASS END=6158561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1311:0,95,255:39,0 chr1 6158562 . A G, 166.93 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,20,0:0,20,0:117:205,120,0,1522,120,1522:255,120,0:0,0:1.6693e+02,1.1693e+02,0.0000e+00,4.5000e+02,1.5170e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,17:0,0,25,15 chr1 6158563 . T . PASS END=6158599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,107,1446:0,107,255:40,0 chr1 6158600 . A . PASS END=6158625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1305:0,101,255:38,0 chr1 6158626 . A . PASS END=6158633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:24,0 chr1 6158634 . A . PASS END=6158634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 6159883 . G . PASS END=6159899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:26,0 chr1 6159900 . C . PASS END=6159998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:30:0,83,1103:0,83,255:36,0 chr1 6159999 . G . PASS END=6159999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 6160000 . T . PASS END=6160023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:33,0 chr1 6160024 . G . PASS END=6160024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:30,0 chr1 6160025 . C . PASS END=6160037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1180:0,96,255:32,0 chr1 6160038 . G . PASS END=6160053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:23,0 chr1 6160054 . G . PASS END=6160078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 6165428 . C . PASS END=6165444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 6165445 . T . PASS END=6165455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 6165456 . T . PASS END=6165456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:10,0 chr1 6165457 . G . PASS END=6165457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 6165458 . T . PASS END=6165458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 6165459 . G . PASS END=6165462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 6165463 . C T, 49.10 PASS DP=12;MQ=250.00;MQRankSum=2.793;ReadPosRankSum=1.635;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,5,0:0.417,0.000:12:2,3,0:5,2,0:48:84,0,50,150,242,392:136,0,219:7,0:4.9101e+01,7.5070e-05,5.3000e+01,1.5007e+02,2.7704e+02,3.9534e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,1,4:4,3,1,4 chr1 6165464 . G . PASS END=6165478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:12,0 chr1 6165479 . C . PASS END=6165481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 6165482 . G . PASS END=6165482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr1 6165483 . C . PASS END=6165483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6165484 . G . PASS END=6165484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 6165485 . T . PASS END=6165486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6165487 . G . PASS END=6165487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 6166294 . C . PASS END=6166302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:24,0 chr1 6166303 . A . PASS END=6166303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 6166304 . A . PASS END=6166337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,931:0,67,255:26,0 chr1 6166338 . G . PASS END=6166340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:22,0 chr1 6166341 . T . PASS END=6166341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 6166342 . A . PASS END=6166342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:21,0 chr1 6166343 . G . PASS END=6166347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 6166455 . C . PASS END=6166457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 6166458 . T . PASS END=6166520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:18,0 chr1 6166521 . A . PASS END=6166521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 6166522 . G . PASS END=6166548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,554:0,51,255:17,0 chr1 6166549 . C . PASS END=6166549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 6166550 . T . PASS END=6166569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 6166676 . C . PASS END=6166677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 6166678 . G . PASS END=6166678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 6166679 . C . PASS END=6166757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1164:0,81,255:40,1 chr1 6166758 . G . PASS END=6166758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:53:42:0,53,1423:0,53,255:39,1 chr1 6166759 . G . PASS END=6166805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:41:0,91,1444:0,91,255:40,0 chr1 6166806 . A . PASS END=6166806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1429:0,79,255:38,0 chr1 6166807 . T . PASS END=6166839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1235:0,84,255:38,0 chr1 6169855 . C . PASS END=6169896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,180:6,0 chr1 6169897 . A . PASS END=6169897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 6169898 . C . PASS END=6169931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 6169932 . C . LowGQ END=6169932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:13,0,146:5,0 chr1 6169933 . A . PASS END=6169942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,205:6,0 chr1 6169943 . A . PASS END=6169960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 6169961 . G . PASS END=6170045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 6170046 . A . PASS END=6170050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 6170454 . C . PASS END=6170463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,810:0,64,255:26,0 chr1 6170464 . C . PASS END=6170472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 6170473 . A . PASS END=6170473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 6170474 . A . PASS END=6170476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,983:0,87,255:30,0 chr1 6170477 . T . PASS END=6170477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 6170478 . G . PASS END=6170544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1088:0,86,255:40,0 chr1 6170545 . C . PASS END=6170545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:33,0 chr1 6170546 . G . PASS END=6170575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1117:0,80,255:33,0 chr1 6170576 . C . PASS END=6170577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1039:0,60,255:27,0 chr1 6170578 . T . PASS END=6170586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 6171835 . G . PASS END=6171872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1031:0,84,255:30,0 chr1 6171873 . G . PASS END=6171873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 6171874 . T . PASS END=6171897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:30,0 chr1 6171898 . G . PASS END=6171898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 6171899 . A . PASS END=6171912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 6171913 . C . PASS END=6171931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,970:0,67,255:26,0 chr1 6171932 . G . PASS END=6171941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 6171942 . C . PASS END=6171942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 6171943 . T . PASS END=6171943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6172200 . C . PASS END=6172337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:42:0,120,1800:0,126,255:40,0 chr1 6172969 . C . PASS END=6173058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:37:0,93,1395:0,98,255:40,0 chr1 6181165 . C . PASS END=6181176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr1 6181177 . G . PASS END=6181179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:24,0 chr1 6181180 . C . PASS END=6181180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 6181181 . C . PASS END=6181192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,963:0,75,255:26,0 chr1 6181193 . G . PASS END=6181197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 6181198 . T . PASS END=6181198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,943:0,54,255:25,0 chr1 6181199 . C . PASS END=6181208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 6181209 . T . PASS END=6181209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 6181210 . C . PASS END=6181256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:86:33:0,86,1202:0,86,255:40,0 chr1 6181257 . T . PASS END=6181258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1411:0,71,255:38,0 chr1 6181259 . G . PASS END=6181266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1362:0,81,255:38,0 chr1 6181267 . T . PASS END=6181267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1317:0,65,255:33,0 chr1 6181268 . C . PASS END=6181270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1443:0,82,255:34,0 chr1 6181271 . C . PASS END=6181275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:73:37:0,73,1311:0,73,255:33,0 chr1 6181276 . T . PASS END=6181276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:32,0 chr1 6181277 . A . PASS END=6181277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:31,0 chr1 6181278 . T . PASS END=6181278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:32,0 chr1 6181279 . C . PASS END=6181281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1231:0,86,255:33,0 chr1 6181282 . A . PASS END=6181285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1111:0,63,255:32,0 chr1 6181286 . G . PASS END=6181286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 6181287 . G . PASS END=6181287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1155:0,25,255:28,0 chr1 6181288 . C . PASS END=6181288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:28,0 chr1 6181289 . T . PASS END=6181289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr1 6181290 . G . PASS END=6181292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:33:0,84,1166:0,85,255:29,0 chr1 6181293 . A . PASS END=6181293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:26,0 chr1 6181294 . G . PASS END=6181294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:27,0 chr1 6181295 . G . PASS END=6181295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 6181296 . G . PASS END=6181296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:27,0 chr1 6181297 . C . PASS END=6181297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1008:0,38,255:25,0 chr1 6181554 . C . PASS END=6181557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 6181558 . A . PASS END=6181558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 6181559 . C . PASS END=6181572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,923:0,66,255:26,0 chr1 6181573 . C . PASS END=6181575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 6181576 . G . PASS END=6181585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 6181586 . C . PASS END=6181586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,887:0,45,255:23,0 chr1 6181587 . C . PASS END=6181600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,809:0,61,255:25,0 chr1 6181601 . C . PASS END=6181601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:24,0 chr1 6181602 . A . PASS END=6181633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,62,255:25,0 chr1 6184008 . C . PASS END=6184013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 6184014 . G . PASS END=6184014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6184015 . G . PASS END=6184037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:18,0 chr1 6184038 . G . PASS END=6184052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:25,0 chr1 6184053 . G . PASS END=6184055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6184056 . C . PASS END=6184056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 6184057 . T . PASS END=6184059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 6184060 . T . PASS END=6184060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 6184061 . G . PASS END=6184061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 6184062 . T . PASS END=6184062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 6184063 . G . PASS END=6184063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 6184064 . T . PASS END=6184064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 6184065 . T . PASS END=6184099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1121:0,80,255:35,0 chr1 6184100 . C . PASS END=6184100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:34,0 chr1 6184101 . C . PASS END=6184115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:35,0 chr1 6184116 . G . PASS END=6184116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:32,0 chr1 6184117 . G . PASS END=6184141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1219:0,86,255:34,0 chr1 6184142 . C . PASS END=6184142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr1 6184143 . C . PASS END=6184144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 6184145 . T . PASS END=6184145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,950:0,60,255:27,0 chr1 6184146 . T . PASS END=6184148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 6184149 . C . PASS END=6184149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 6184150 . A . PASS END=6184152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6184153 . C . PASS END=6184153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 6184154 . T . PASS END=6184154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:26,0 chr1 6184155 . C . PASS END=6184155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6184156 . A . PASS END=6184159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1063:0,74,255:26,0 chr1 6184160 . T . PASS END=6184160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:25,0 chr1 6184161 . C . PASS END=6184167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,998:0,68,255:26,0 chr1 6184577 . C . PASS END=6184591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr1 6184592 . T . LowGQ END=6184594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 6184595 . C . PASS END=6184605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr1 6184606 . T . PASS END=6184606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 6184607 . G . PASS END=6184608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 6184609 . G . PASS END=6184609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 6184610 . G . PASS END=6184613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 6184614 . A . PASS END=6184615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 6184616 . C . PASS END=6184616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6184617 . A . PASS END=6184617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr1 6184618 . C . PASS END=6184619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6184620 . T . PASS END=6184622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 6184623 . T . PASS END=6184623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 6184624 . G . PASS END=6184628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 6184629 . G . PASS END=6184630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 6184631 . G . PASS END=6184631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 6184632 . A . PASS END=6184632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 6184633 . G . PASS END=6184634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 6184635 . C . PASS END=6184635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 6184636 . C . PASS END=6184636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 6184637 . C . PASS END=6184637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 6184638 . T . PASS END=6184640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 6184641 . C . PASS END=6184641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:14,0 chr1 6184642 . G . PASS END=6184645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 6184646 . C . PASS END=6184646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr1 6184647 . A . PASS END=6184647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 6184648 . C . PASS END=6184649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 6184650 . C . PASS END=6184650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,604:0,23,255:14,0 chr1 6184651 . C . PASS END=6184651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 6184652 . G . PASS END=6184653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 6184654 . C . PASS END=6184655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 6184656 . G . PASS END=6184656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6184657 . C . PASS END=6184658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 6184659 . A . PASS END=6184659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:15,0 chr1 6184660 . A . LowGQ END=6184660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,482:4,0,255:15,0 chr1 6184661 . G . PASS END=6184661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6184662 . G . PASS END=6184662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr1 6184663 . T . PASS END=6184663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6184664 . C . PASS END=6184664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,568:0,5,255:17,0 chr1 6184665 . T . PASS END=6184665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6184666 . C . PASS END=6184666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,598:0,13,255:17,0 chr1 6184667 . T . PASS END=6184667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,574:0,5,255:17,0 chr1 6184668 . G . PASS END=6184668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr1 6184669 . C . PASS END=6184669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,643:0,5,255:17,0 chr1 6184670 . A . PASS END=6184671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,627:0,21,255:18,0 chr1 6184672 . C . PASS END=6184672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,592:0,40,255:18,0 chr1 6184673 . A . PASS END=6184675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:21:19:0,21,551:0,21,255:19,0 chr1 6184676 . C . PASS END=6184676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,555:0,10,255:16,0 chr1 6184677 . G . PASS END=6184678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 6184679 . C . PASS END=6184679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:18,0 chr1 6184680 . C . PASS END=6184680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:17,0 chr1 6184681 . C . LowGQ END=6184681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:9,0,255:16,0 chr1 6184682 . C . PASS END=6184682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:16,0 chr1 6184683 . G . PASS END=6184683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 6184684 . G . LowGQ END=6184684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,598:17,0,255:16,0 chr1 6184685 . C . PASS END=6184685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:17,0 chr1 6184686 . T . LowGQ END=6184686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,494:51,0,255:14,0 chr1 6184687 . C . PASS END=6184687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,599:0,40,255:17,0 chr1 6184688 . A . PASS END=6184688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,529:0,24,255:16,0 chr1 6184689 . C . PASS END=6184689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 6184690 . A . LowGQ END=6184690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,418:54,0,255:14,0 chr1 6184691 . C . PASS END=6184691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,550:0,24,255:16,0 chr1 6184692 . A . LowGQ END=6184692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,6:18:0:18:0,0,283:90,0,255:12,0 chr1 6184693 . G . PASS END=6184693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 6184694 . G . PASS END=6184694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 6184695 . T . LowGQ END=6184695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,424:57,0,255:13,0 chr1 6184696 . G . PASS END=6184697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr1 6184698 . C . LowGQ END=6184699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,413:24,0,255:14,0 chr1 6184700 . C . PASS END=6184700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,519:0,21,255:13,0 chr1 6184701 . A . LowGQ END=6184705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,5:18:0:17:0,0,278:1,0,255:13,0 chr1 6184706 . G . PASS END=6184706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,492:0,20,255:13,0 chr1 6184707 . A . LowGQ END=6184707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,6:17:0:17:0,0,261:85,0,255:9,0 chr1 6184708 . G . PASS END=6184709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 6184710 . G . LowGQ END=6184711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,324:8,0,255:11,0 chr1 6184712 . C . PASS END=6184712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,421:0,15,255:11,0 chr1 6184713 . A . PASS END=6184713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,429:0,1,255:11,0 chr1 6184714 . C . PASS END=6184714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:12,0 chr1 6184715 . A . LowGQ END=6184717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,6:17:0:16:0,0,199:2,0,255:10,0 chr1 6184718 . G . PASS END=6184718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,462:0,17,255:10,0 chr1 6184719 . G . LowGQ END=6184719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,5:16:0:16:0,0,255:79,0,255:7,0 chr1 6184720 . C . PASS END=6184720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr1 6184721 . T . LowGQ END=6184721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,5:16:0:16:0,0,299:35,0,255:6,0 chr1 6185160 . C . PASS END=6185166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,615:0,57,255:19,0 chr1 6185167 . C . PASS END=6185213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 6185214 . A . PASS END=6185214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 6185215 . A . PASS END=6185215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 6185216 . G . PASS END=6185217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6185218 . C . PASS END=6185218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 6185219 . G . PASS END=6185219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6185220 . T . PASS END=6185220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:19,0 chr1 6185221 . C . PASS END=6185221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 6185222 . C . PASS END=6185222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:20,0 chr1 6185223 . T . PASS END=6185223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:20,0 chr1 6185224 . G . PASS END=6185227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 6185228 . G . PASS END=6185228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 6185229 . G . PASS END=6185230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 6185231 . C . PASS END=6185231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 6185232 . A . PASS END=6185233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6185234 . G . PASS END=6185234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 6185235 . C . PASS END=6185237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6185238 . C . PASS END=6185242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,798:0,50,255:19,0 chr1 6185243 . C . PASS END=6185243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6185244 . A . PASS END=6185244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,686:0,27,255:19,0 chr1 6185245 . T . PASS END=6185245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6185246 . G . PASS END=6185246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 6185247 . A . PASS END=6185247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 6185248 . T . PASS END=6185250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6185251 . C . PASS END=6185259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,696:0,44,255:18,0 chr1 6185260 . A . PASS END=6185260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:15,0 chr1 6185261 . G . PASS END=6185269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:16,0 chr1 6185270 . C . PASS END=6185270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 6185271 . T . PASS END=6185273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 6185274 . C . PASS END=6185274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 6185275 . G . PASS END=6185276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 6185277 . G . PASS END=6185277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr1 6185278 . C . PASS END=6185278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:10,0 chr1 6185279 . A . PASS END=6185283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 6185284 . A . PASS END=6185284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 6185285 . G . PASS END=6185288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 6185289 . A . PASS END=6185289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 6185290 . G . PASS END=6185290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 6185291 . C . PASS END=6185293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 6185584 . C . PASS END=6185672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1302:0,87,255:40,0 chr1 6185826 . T . PASS END=6185918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:36:0,87,1305:0,91,255:40,0 chr1 6186632 . C . PASS END=6186638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 6186639 . C . PASS END=6186639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 6186640 . T . PASS END=6186644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 6186645 . G . PASS END=6186645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:20,0 chr1 6186646 . G . PASS END=6186649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 6186650 . C . PASS END=6186650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:19,0 chr1 6186651 . A . PASS END=6186661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:21:0,61,792:0,61,255:26,0 chr1 6186662 . T . PASS END=6186662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:25,0 chr1 6186663 . G . PASS END=6186672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr1 6186673 . C . PASS END=6186678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 6186679 . C . PASS END=6186679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 6186680 . G . PASS END=6186681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 6186682 . T . PASS END=6186682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:26,0 chr1 6186683 . T . PASS END=6186688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:32,0 chr1 6186689 . T . PASS END=6186689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:30,0 chr1 6186690 . G . PASS END=6186806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1210:0,86,255:40,0 chr1 6187143 . C . PASS END=6187188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 6187189 . T . PASS END=6187196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 6187197 . A . PASS END=6187215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:7:0,21,249:0,21,249:8,0 chr1 6187216 . C . PASS END=6187224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 6188106 . C . PASS END=6188110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 6188111 . C . PASS END=6188113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 6188114 . C . PASS END=6188114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 6188115 . C . PASS END=6188124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 6188125 . A . PASS END=6188125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:27,0 chr1 6188126 . C . PASS END=6188278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1127:0,84,255:40,0 chr1 6188559 . C . PASS END=6188581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,917:0,62,255:26,0 chr1 6188582 . T . PASS END=6188582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:24,0 chr1 6188583 . T . PASS END=6188585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,928:0,84,255:28,0 chr1 6188586 . T . PASS END=6188586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 6188587 . T . PASS END=6188599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 6188600 . A . PASS END=6188600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 6188601 . A . PASS END=6188610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:30,0 chr1 6188611 . T . PASS END=6188611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,955:0,76,255:26,0 chr1 6188612 . T . PASS END=6188612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 6188613 . T . PASS END=6188615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 6188616 . A . PASS END=6188630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1094:0,90,255:32,0 chr1 6188631 . G . PASS END=6188631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr1 6188632 . G . PASS END=6188644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 6188645 . G . PASS END=6188645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr1 6188646 . G . PASS END=6188648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6188649 . T . PASS END=6188649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 6188650 . C . PASS END=6188653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 6188654 . C . PASS END=6188654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 6188655 . C . PASS END=6188655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 6188656 . C . PASS END=6188669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 6188898 . C . PASS END=6188902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 6188903 . A . PASS END=6188911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 6188912 . T . PASS END=6188912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 6188913 . T . PASS END=6188991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,806:0,63,255:26,0 chr1 6188992 . G . PASS END=6188992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 6188993 . G . PASS END=6189016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 6189017 . A . PASS END=6189035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 6189036 . C . PASS END=6189046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 6189047 . C . PASS END=6189085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,613:0,45,255:17,0 chr1 6189086 . A . PASS END=6189086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:13,0 chr1 6189087 . T . PASS END=6189089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 6189090 . C . PASS END=6189104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,466:0,42,255:14,0 chr1 6189105 . C . PASS END=6189129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 6190208 . C . PASS END=6190388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:39:0,80,1388:0,80,255:40,0 chr1 6191691 . C . PASS END=6191727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1273:0,81,255:40,0 chr1 6191728 . G . PASS END=6191728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1448:0,72,255:40,0 chr1 6191729 . G . PASS END=6191744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:49:0,81,1535:0,81,255:40,0 chr1 6191745 . T . PASS END=6191745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:40:53:0,40,1607:0,40,255:40,0 chr1 6191746 . C . PASS END=6191808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:85:41:0,85,1397:0,85,255:40,0 chr1 6194188 . C . PASS END=6194319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1305:0,105,255:40,0 chr1 6194778 . C . PASS END=6194919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:88:40:0,88,1480:0,88,255:40,0 chr1 6195290 . T . PASS END=6195295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1008:0,78,255:26,0 chr1 6195296 . A . PASS END=6195338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:30,0 chr1 6195339 . G . PASS END=6195339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 6195340 . C . PASS END=6195379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 6195380 . T . PASS END=6195380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 6195381 . G . PASS END=6195381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 6195382 . C . PASS END=6195398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,68,255:26,0 chr1 6195399 . G . PASS END=6195400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 6195401 . A . PASS END=6195419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 6195420 . C . PASS END=6195420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 6195421 . C . PASS END=6195426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6195427 . G . PASS END=6195427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6195428 . A . PASS END=6195432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6195433 . A . PASS END=6195461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 6195462 . T . PASS END=6195462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 6195463 . G . PASS END=6195463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 6196577 . T . PASS END=6196587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 6196588 . T . PASS END=6196588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 6196589 . G . PASS END=6196594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 6196595 . A . PASS END=6196595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 6196596 . G . PASS END=6196600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 6196601 . T . PASS END=6196601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 6196602 . T . PASS END=6196606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 6196607 . A . PASS END=6196611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 6196612 . G . PASS END=6196612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 6196613 . A . PASS END=6196638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 6196639 . G . PASS END=6196639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:29,0 chr1 6196640 . G . PASS END=6196658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1135:0,93,255:31,0 chr1 6196659 . G . PASS END=6196659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 6196660 . C . PASS END=6196677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:31,0 chr1 6196678 . G . PASS END=6196698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:26:0,73,903:0,73,255:26,0 chr1 6196788 . C . PASS END=6196790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6196791 . G . PASS END=6196791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 6196792 . G . PASS END=6196793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 6196794 . C . PASS END=6196799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 6196800 . G . PASS END=6196800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:22,0 chr1 6196801 . T . PASS END=6196816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:24,0 chr1 6196817 . C . PASS END=6196817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:22,0 chr1 6196818 . C . PASS END=6196818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6196819 . T . PASS END=6196819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 6196820 . C . PASS END=6196822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 6196823 . C . PASS END=6196823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 6196824 . T . PASS END=6196835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 6196836 . G . PASS END=6196838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 6196839 . C . PASS END=6196839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:27,0 chr1 6196840 . C . PASS END=6196859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:26,0 chr1 6196860 . G . PASS END=6196862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 6196863 . C . PASS END=6196864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6196865 . G . PASS END=6196867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6196868 . C . PASS END=6196876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,970:0,67,255:25,0 chr1 6196877 . T . PASS END=6196885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 6196886 . A . PASS END=6196887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 6196888 . G . PASS END=6196920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:17:0,43,601:0,43,255:19,0 chr1 6196921 . T . PASS END=6196921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:15,0 chr1 6196922 . C . PASS END=6196925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6202188 . C . PASS END=6202193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6202194 . A . PASS END=6202194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,919:0,53,255:25,0 chr1 6202195 . C . PASS END=6202201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr1 6202202 . C . PASS END=6202294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1008:0,81,255:39,0 chr1 6202295 . C . PASS END=6202295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr1 6202296 . G . PASS END=6202297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 6202298 . A . PASS END=6202298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 6202299 . G . PASS END=6202315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1332:0,92,255:36,0 chr1 6202316 . T . PASS END=6202316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:38:36:0,38,1127:0,38,255:34,0 chr1 6202317 . C . PASS END=6202359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1047:0,90,255:36,0 chr1 6202360 . C . PASS END=6202383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr1 6202384 . T . PASS END=6202385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 6202386 . G . PASS END=6202388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 6202474 . C . PASS END=6202489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,27,255:9,0 chr1 6202490 . T . PASS END=6202498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 6202499 . A . PASS END=6202499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 6202500 . C . PASS END=6202529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,413:0,39,255:13,0 chr1 6202530 . T . PASS END=6202530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 6202531 . C . PASS END=6202536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 6202537 . G . PASS END=6202622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:17,0 chr1 6202623 . T . PASS END=6202623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 6202624 . G . PASS END=6202628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 6202629 . C . PASS END=6202636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 6202637 . C . PASS END=6202637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 6202638 . A . PASS END=6202638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 6202639 . T . PASS END=6202642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 6202643 . T . PASS END=6202665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,385:0,39,255:13,0 chr1 6203883 . G . PASS END=6203962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:37:0,88,1360:0,88,255:40,0 chr1 6203963 . G . PASS END=6203963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:33,0 chr1 6203964 . C . PASS END=6203985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1194:0,83,255:34,0 chr1 6203986 . A . PASS END=6203986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:34,0 chr1 6203987 . G . PASS END=6203991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1302:0,89,255:37,0 chr1 6204084 . C . PASS END=6204215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:33:0,90,1175:0,91,255:40,0 chr1 6206272 . C . PASS END=6206483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:33:0,86,1166:0,86,255:40,0 chr1 6206725 . C . PASS END=6206737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 6206738 . A . PASS END=6206745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 6206746 . G . PASS END=6206752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6206753 . C . PASS END=6206753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6206754 . A . PASS END=6206758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 6206759 . G . PASS END=6206759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,922:0,34,255:24,0 chr1 6206760 . A . PASS END=6206760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 6206761 . C . PASS END=6206763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 6206764 . C . PASS END=6206767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:28,0 chr1 6206768 . G . PASS END=6206769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 6206770 . C . PASS END=6206786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 6206787 . C . PASS END=6206787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 6206788 . T . PASS END=6206796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 6206797 . G . PASS END=6206797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 6206798 . A . PASS END=6206807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 6206808 . G . PASS END=6206855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:24,0 chr1 6206856 . C . PASS END=6206856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 6206857 . C . PASS END=6206876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 6206877 . G . PASS END=6206902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 6206903 . C . PASS END=6206905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 6206906 . T . PASS END=6206921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,459:0,43,255:19,0 chr1 6206922 . G . PASS END=6206931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,495:0,32,255:13,0 chr1 6208914 . A . PASS END=6208928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:34,0 chr1 6208929 . G . PASS END=6208930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr1 6208931 . G . PASS END=6208937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1252:0,108,255:36,0 chr1 6208938 . A . PASS END=6208938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr1 6208939 . C . PASS END=6209036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:32:0,81,1164:0,83,255:38,0 chr1 6209037 . G . PASS END=6209037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:33,0 chr1 6209038 . C . PASS END=6209050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:36:0,87,1280:0,92,255:35,0 chr1 6209051 . T . PASS END=6209051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:28,0 chr1 6209052 . G . PASS END=6209057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:28,0 chr1 6209058 . G . PASS END=6209059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 6209060 . C . PASS END=6209074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1186:0,83,255:30,0 chr1 6209075 . A . PASS END=6209076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 6209077 . C . PASS END=6209079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 6209080 . C . PASS END=6209080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 6209081 . C . PASS END=6209081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 6209082 . C . PASS END=6209082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 6209083 . T . PASS END=6209084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 6209085 . C . PASS END=6209086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 6209087 . C . PASS END=6209087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:26,0 chr1 6209088 . C . PASS END=6209090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,976:0,70,255:26,0 chr1 6209091 . T . PASS END=6209095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6209096 . C . PASS END=6209098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 6209099 . C . PASS END=6209099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6209100 . G . PASS END=6209100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 6209101 . T . PASS END=6209102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:27,0 chr1 6209103 . G . PASS END=6209103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,884:0,34,255:25,0 chr1 6209104 . T . PASS END=6209106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 6209107 . T . PASS END=6209108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 6209109 . C . PASS END=6209109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 6209110 . G . PASS END=6209110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr1 6209111 . G . PASS END=6209111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 6209112 . C . PASS END=6209112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:23,0 chr1 6209113 . T . PASS END=6209115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:24,0 chr1 6209116 . C . PASS END=6209116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:25,0 chr1 6209117 . A . PASS END=6209123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 6209124 . C . PASS END=6209124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:20,0 chr1 6209125 . C . PASS END=6209127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:27:0,66,990:0,67,255:22,0 chr1 6209128 . T . PASS END=6209128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:20,0 chr1 6209129 . C . PASS END=6209133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:22,0 chr1 6209134 . T . PASS END=6209134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr1 6209135 . C . PASS END=6209135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6209306 . A . PASS END=6209306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 6209307 . C . PASS END=6209307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 6209308 . A . PASS END=6209308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6209309 . G . PASS END=6209309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6209310 . T . PASS END=6209310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:14,0 chr1 6209311 . G . PASS END=6209313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 6209314 . G . PASS END=6209316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 6209317 . A . PASS END=6209319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 6209320 . T . PASS END=6209320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:14,0 chr1 6209321 . C . PASS END=6209324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,635:0,40,255:17,0 chr1 6209325 . T . PASS END=6209325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 6209326 . T . PASS END=6209330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr1 6209331 . T . PASS END=6209331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 6209332 . C . PASS END=6209340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 6209341 . T . PASS END=6209341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 6209342 . C . PASS END=6209346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 6209347 . G . PASS END=6209348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 6209349 . T . PASS END=6209349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 6209350 . C . PASS END=6209350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 6209351 . T . LowGQ END=6209351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:1,0,255:18,0 chr1 6209352 . G . PASS END=6209352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 6209353 . G . PASS END=6209353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr1 6209354 . G . PASS END=6209357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 6209358 . A . PASS END=6209358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 6209359 . G . PASS END=6209360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6209361 . C . PASS END=6209362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 6209363 . T . PASS END=6209363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6209364 . A . PASS END=6209364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 6209365 . C . PASS END=6209366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6209367 . A . PASS END=6209367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 6209368 . G . PASS END=6209372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:24,0 chr1 6209373 . T . PASS END=6209373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:23,0 chr1 6209374 . A . PASS END=6209391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,892:0,72,255:25,0 chr1 6209392 . C . PASS END=6209392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 6209393 . G . PASS END=6209399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 6209400 . A . PASS END=6209400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:21,0 chr1 6209401 . T . PASS END=6209403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6209404 . T . PASS END=6209404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,738:0,55,255:21,0 chr1 6209405 . C . PASS END=6209410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 6209411 . A . PASS END=6209411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 6209412 . C . PASS END=6209422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,908:0,72,255:24,0 chr1 6209423 . C . PASS END=6209423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 6209424 . A . PASS END=6209445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:21,0 chr1 6209446 . C . PASS END=6209464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,604:0,44,255:16,0 chr1 6209465 . A . PASS END=6209465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr1 6209466 . T . PASS END=6209467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6209468 . A . PASS END=6209471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:11,0 chr1 6209472 . A . PASS END=6209472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:10,0 chr1 6211092 . T . PASS END=6211094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,619:0,51,255:17,0 chr1 6211095 . T . PASS END=6211095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 6211096 . C . PASS END=6211103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,500:0,51,255:18,0 chr1 6211104 . T . PASS END=6211104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 6211105 . G . PASS END=6211125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,607:0,40,255:19,0 chr1 6211126 . G . PASS END=6211126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6211127 . C . PASS END=6211127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 6211128 . C . PASS END=6211128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 6211129 . C . PASS END=6211131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6211132 . G . PASS END=6211146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,839:0,63,255:23,0 chr1 6211147 . G . PASS END=6211147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 6211148 . G . PASS END=6211163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:23,0 chr1 6211164 . T . PASS END=6211165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 6211166 . T . PASS END=6211172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 6211173 . T . PASS END=6211173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 6211174 . G . PASS END=6211183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,817:0,69,255:23,0 chr1 6211184 . A . PASS END=6211184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 6211185 . A . PASS END=6211187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6211188 . C . PASS END=6211188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,725:0,30,255:20,0 chr1 6211189 . C . PASS END=6211191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6211192 . C . PASS END=6211192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:19,0 chr1 6211193 . T . PASS END=6211194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6211195 . C . PASS END=6211197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 6211198 . C . PASS END=6211198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,562:0,29,255:17,0 chr1 6211199 . C . LowGQ END=6211199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,567:1,0,255:16,0 chr1 6211200 . T . PASS END=6211200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6211201 . C . PASS END=6211201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,615:0,16,255:17,0 chr1 6211202 . T . PASS END=6211202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6211203 . C . PASS END=6211207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:20,0 chr1 6211208 . T . PASS END=6211208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 6211209 . C . PASS END=6211211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 6211212 . C . PASS END=6211212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 6211213 . A . PASS END=6211215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 6212472 . C . PASS END=6212596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,108,1623:0,108,255:40,0 chr1 6214720 . C . PASS END=6214728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 6214729 . C . PASS END=6214729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 6214730 . C . PASS END=6214739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,411:0,36,255:13,0 chr1 6214740 . G . PASS END=6214741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 6214742 . C . PASS END=6214742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6214743 . T . PASS END=6214743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 6214744 . T . PASS END=6214751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6214752 . G . PASS END=6214760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:16,0 chr1 6214761 . T . PASS END=6214761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 6214762 . G . PASS END=6214765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 6214766 . C . PASS END=6214766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 6214767 . A . PASS END=6214774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr1 6214775 . G . PASS END=6214775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 6214776 . G . PASS END=6214783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,705:0,57,255:19,0 chr1 6214784 . G . PASS END=6214792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 6214793 . A . PASS END=6214800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 6214801 . T . PASS END=6214801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 6214802 . G . PASS END=6214802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:17,0 chr1 6214803 . G . PASS END=6214807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 6214808 . C . PASS END=6214813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6214814 . T . PASS END=6214817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 6214818 . G . PASS END=6214820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6214821 . G . PASS END=6214821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 6214822 . C . PASS END=6214838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 6214839 . G . PASS END=6214839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 6214840 . C . PASS END=6214850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr1 6214851 . G . PASS END=6214871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:30,0 chr1 6214872 . T . PASS END=6214872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1060:0,77,255:30,0 chr1 6214873 . T . PASS END=6214879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:30,0 chr1 6214880 . G . PASS END=6214880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 6214881 . A . PASS END=6214887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 6214888 . G . PASS END=6214888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 6214889 . C . PASS END=6214893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1125:0,90,255:32,0 chr1 6214894 . T . PASS END=6214894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 6214895 . G . PASS END=6214941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1149:0,82,255:32,0 chr1 6214942 . T . PASS END=6214942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,944:0,76,255:29,0 chr1 6214943 . C . PASS END=6214951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 6214952 . G . PASS END=6214958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:24,0 chr1 6215659 . C . PASS END=6215669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,861:0,69,255:26,0 chr1 6215670 . G . PASS END=6215679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,996:0,81,255:28,0 chr1 6215680 . T . PASS END=6215680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 6215681 . T . PASS END=6215685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 6215686 . T . PASS END=6215686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 6215687 . T . PASS END=6215708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1121:0,87,255:35,0 chr1 6215709 . C . PASS END=6215710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:69:36:0,69,1266:0,69,255:36,0 chr1 6215711 . C . PASS END=6215774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:30:0,81,1094:0,90,255:38,0 chr1 6215775 . C . PASS END=6215777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 6219396 . C . PASS END=6219575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:83:40:0,83,1465:0,83,255:40,0 chr1 6228210 . C . PASS END=6228217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1290:0,94,255:39,0 chr1 6228218 . T . PASS END=6228337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:92:37:0,92,1419:0,92,255:40,0 chr1 6240005 . C . PASS END=6240010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 6240011 . T . PASS END=6240011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 6240012 . C . PASS END=6240022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 6240023 . T . PASS END=6240023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:11,0 chr1 6240024 . C . PASS END=6240064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,398:0,36,255:12,0 chr1 6240065 . T . PASS END=6240083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 6241528 . T . PASS END=6241530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 6241531 . G . PASS END=6241531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 6241532 . C . PASS END=6241535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 6241536 . G . PASS END=6241543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:20,0 chr1 6241544 . C . PASS END=6241546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6246732 . T . PASS END=6246741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,645:0,41,255:19,0 chr1 6246742 . T . PASS END=6246754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,817:0,63,255:26,0 chr1 6246755 . C . PASS END=6246762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:31,0 chr1 6246763 . T . PASS END=6246764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 6246765 . G . PASS END=6246765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 6246766 . T . PASS END=6246766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:30,0 chr1 6246767 . T . PASS END=6246767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 6246768 . A . PASS END=6246768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1100:0,63,255:30,0 chr1 6246769 . A . PASS END=6246769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 6246770 . T . PASS END=6246770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:31,0 chr1 6246771 . C . PASS END=6246876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1133:0,80,255:40,0 chr1 6252990 . C . PASS END=6253013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:59:0,120,1800:0,161,255:40,0 chr1 6253014 . G . PASS END=6253114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,102,1451:0,104,255:40,0 chr1 6257712 . A . PASS END=6257783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:91:42:0,91,1339:0,91,255:40,0 chr1 6257784 . C . PASS END=6257784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:70:62:0,70,2052:0,70,255:40,5 chr1 6257785 . T . PASS END=6257785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,5:64:19:64:0,19,2106:0,19,255:40,5 chr1 6257786 . T . PASS END=6257786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:70:62:0,70,2125:0,70,255:40,0 chr1 6257787 . T . PASS END=6257788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 6257789 . T . PASS END=6257816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,113,1800:0,113,255:40,0 chr1 6259622 . C . PASS END=6259622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 6259623 . A . PASS END=6259625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 6259626 . G . PASS END=6259626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:21,0 chr1 6259627 . G . PASS END=6259633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,970:0,78,255:26,0 chr1 6266086 . A . PASS END=6266086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 6266087 . T . PASS END=6266111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,258:0,21,255:9,0 chr1 6266112 . T C, 0.02 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:4,1,0:4,0,0:23:12,0,50,36,286,322:28,0,244:7,0:2.1274e-02,2.3111e+01,7.6111e+01,5.8869e+01,3.4399e+02,3.4798e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,1,0:6,2,1,0 chr1 6266113 . C . PASS END=6266113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 6266114 . A . PASS END=6266120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 6266121 . G . PASS END=6266124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6266125 . A . PASS END=6266149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:13,0 chr1 6266150 . G . PASS END=6266150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 6266151 . A . PASS END=6266168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr1 6266169 . A . PASS END=6266169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,527:0,21,255:16,0 chr1 6266170 . G . PASS END=6266173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,623:0,54,255:19,0 chr1 6266174 . A . PASS END=6266174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr1 6266175 . C . PASS END=6266179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 6266180 . G . PASS END=6266180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6266181 . A . PASS END=6266181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 6266182 . G . PASS END=6266184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6266185 . A . PASS END=6266185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 6266186 . G . PASS END=6266196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:25,0 chr1 6266197 . G . PASS END=6266197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 6266198 . A . PASS END=6266198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 6266199 . G . PASS END=6266202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 6266203 . G . PASS END=6266205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6266206 . C . PASS END=6266227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 6266228 . A . PASS END=6266228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 6266229 . C . PASS END=6266244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:31,0 chr1 6266245 . C . PASS END=6266245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 6266246 . T . PASS END=6266252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 6266253 . C . PASS END=6266263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 6266264 . C . PASS END=6266264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6266265 . G . PASS END=6266279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,62,255:26,0 chr1 6266280 . G . PASS END=6266280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 6266281 . C . PASS END=6266306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr1 6266307 . G . PASS END=6266338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:17:0,42,630:0,46,255:19,0 chr1 6266339 . G . PASS END=6266355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 6266356 . C . PASS END=6266356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 6266357 . C . PASS END=6266362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 6266596 . A . PASS END=6266596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 6266597 . T . PASS END=6266607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 6266608 . A . PASS END=6266616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 6266617 . C . PASS END=6266625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 6266626 . G . PASS END=6266663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:26,0 chr1 6266664 . G . PASS END=6266754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1070:0,84,255:36,0 chr1 6266755 . A . PASS END=6266786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 6267439 . A . PASS END=6267571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:30:0,83,1260:0,83,255:40,0 chr1 6268941 . G . PASS END=6268949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:19,0 chr1 6268950 . A . PASS END=6268958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:21,0 chr1 6268959 . T . PASS END=6268959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 6268960 . T . PASS END=6268965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 6268966 . A . PASS END=6268966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 6268967 . C . PASS END=6268978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,778:0,66,255:23,0 chr1 6268979 . G . PASS END=6268979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:23,1 chr1 6268980 . C . PASS END=6268981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:43:26:0,43,918:0,43,255:26,1 chr1 6268982 . C . PASS END=6268985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6268986 . T . PASS END=6269001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,996:0,84,255:29,0 chr1 6269002 . A . PASS END=6269002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 6269003 . C . PASS END=6269005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 6269006 . G . PASS END=6269007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,985:0,73,255:29,0 chr1 6269008 . C . PASS END=6269008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 6269009 . G . PASS END=6269009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 6269010 . C . PASS END=6269010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 6269011 . A . PASS END=6269011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 6269012 . C . PASS END=6269020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:30,0 chr1 6269021 . C . PASS END=6269022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr1 6269023 . T . PASS END=6269023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 6269024 . G . PASS END=6269024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 6269025 . T . PASS END=6269029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 6269030 . G . PASS END=6269030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 6269031 . C . PASS END=6269031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 6269032 . G . PASS END=6269032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 6269033 . C . PASS END=6269033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 6269034 . C . PASS END=6269034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 6269035 . A . PASS END=6269039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 6269040 . A . PASS END=6269040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:26,0 chr1 6269041 . T . PASS END=6269041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 6269042 . C . PASS END=6269042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 6269043 . G . PASS END=6269044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 6269045 . G . PASS END=6269045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 6269046 . G . PASS END=6269046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 6269047 . C . PASS END=6269047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 6269048 . C . PASS END=6269050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 6269051 . G . PASS END=6269052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 6269053 . G . PASS END=6269053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 6269054 . T . PASS END=6269055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 6269056 . A . PASS END=6269056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 6269057 . G . PASS END=6269064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 6269065 . G . PASS END=6269067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:25,0 chr1 6269068 . A . PASS END=6269068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6269069 . C . PASS END=6269069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 6269070 . G . PASS END=6269070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:25,0 chr1 6269071 . T . PASS END=6269071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:24,0 chr1 6269072 . G . PASS END=6269084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr1 6269085 . A . PASS END=6269085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,898:0,26,255:19,0 chr1 6269175 . C . PASS END=6269182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 6269183 . G . PASS END=6269183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:14,0 chr1 6269184 . C . PASS END=6269184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 6269185 . A . PASS END=6269185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 6269186 . G . PASS END=6269245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:19,0 chr1 6269246 . G . PASS END=6269246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6269247 . A . PASS END=6269255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 6269256 . A . PASS END=6269256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:27:16:0,27,405:0,32,255:8,0 chr1 6269328 . G . PASS END=6269373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:16,0 chr1 6269374 . G . PASS END=6269374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6269375 . G . PASS END=6269392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 6269393 . A . PASS END=6269393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 6269394 . G . PASS END=6269395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6269396 . C . PASS END=6269403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:16:0,30,450:0,48,255:12,0 chr1 6269474 . G . PASS END=6269480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6269481 . A . PASS END=6269481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr1 6269482 . G . PASS END=6269527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,582:0,40,255:19,0 chr1 6269528 . A . PASS END=6269528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,550:0,2,255:16,0 chr1 6269529 . T . PASS END=6269534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,714:0,46,255:19,0 chr1 6269535 . A . PASS END=6269539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 6269540 . G . PASS END=6269541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 6269542 . G . PASS END=6269542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:19,0 chr1 6269543 . C . PASS END=6269543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6269544 . G . PASS END=6269544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 6269545 . G . PASS END=6269546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6269547 . A . PASS END=6269547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 6269548 . C . PASS END=6269549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6269550 . G . PASS END=6269550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 6269551 . C . PASS END=6269553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6269554 . C . PASS END=6269582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 6269583 . T . PASS END=6269583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 6269584 . C . PASS END=6269593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 6269594 . A . PASS END=6269594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 6269595 . T . PASS END=6269599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 6269984 . G . PASS END=6269984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6269985 . A . PASS END=6269987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6269988 . G . PASS END=6269990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6269991 . T . PASS END=6269991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 6269992 . G . PASS END=6269993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6269994 . C . PASS END=6269996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6269997 . A . PASS END=6270030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,861:0,63,255:24,0 chr1 6270283 . C . PASS END=6270295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,523:0,48,255:16,0 chr1 6270296 . A . PASS END=6270296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:14,0 chr1 6270297 . A . PASS END=6270311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,623:0,48,255:19,0 chr1 6270312 . A . PASS END=6270312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6270313 . G . PASS END=6270313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 6270314 . G . PASS END=6270316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 6270317 . C . PASS END=6270317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 6270318 . A . PASS END=6270322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 6270323 . T . PASS END=6270329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 6270330 . T . PASS END=6270330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr1 6270331 . G . PASS END=6270332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6270333 . C . PASS END=6270333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 6270334 . C . PASS END=6270334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6270335 . A . PASS END=6270355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,599:0,40,255:19,0 chr1 6270430 . G . PASS END=6270493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr1 6270494 . G . PASS END=6270498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6270930 . G . PASS END=6270934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:18,0 chr1 6270935 . G . PASS END=6270935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 6270936 . A . PASS END=6270936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 6270937 . T . PASS END=6270937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 6270938 . G . PASS END=6270943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,674:0,54,255:18,0 chr1 6270944 . G . PASS END=6270944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 6270945 . C . PASS END=6270954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 6270955 . T . PASS END=6270955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 6270956 . C . PASS END=6270969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,630:0,40,255:18,0 chr1 6270970 . A . PASS END=6270970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 6270971 . C . PASS END=6270971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 6270972 . C . PASS END=6270972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 6270973 . A . PASS END=6270994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,675:0,44,255:17,0 chr1 6270995 . C . PASS END=6270995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 6270996 . A . PASS END=6270998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr1 6271081 . A . PASS END=6271140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,529:0,41,255:19,0 chr1 6271141 . C . PASS END=6271169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 6271170 . T . PASS END=6271170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 6271171 . G . PASS END=6271173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 6271174 . A . PASS END=6271174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 6271175 . A . PASS END=6271179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 6271927 . G . PASS END=6271928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 6271929 . T . PASS END=6271929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 6271930 . G . PASS END=6271942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:30,0 chr1 6271943 . G . PASS END=6271943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 6271944 . G . PASS END=6271964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1080:0,90,255:34,0 chr1 6271965 . C . PASS END=6271965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr1 6271966 . C . PASS END=6272020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:36:0,88,1278:0,88,255:39,0 chr1 6272021 . C . PASS END=6272021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:34,0 chr1 6272022 . T . PASS END=6272051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:34:0,93,1327:0,95,255:36,0 chr1 6272052 . T . PASS END=6272052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr1 6272053 . G . PASS END=6272068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 6272069 . A . PASS END=6272099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,908:0,61,255:26,0 chr1 6272100 . A . PASS END=6272100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 6272101 . G . PASS END=6272113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:19:0,45,675:0,57,255:17,0 chr1 6272291 . C . PASS END=6272522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:29:0,81,1072:0,83,255:40,0 chr1 6272523 . A . PASS END=6272523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 6272524 . C . PASS END=6272539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,99,255:32,0 chr1 6272540 . A . PASS END=6272540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1193:0,75,255:27,0 chr1 6272541 . C . PASS END=6272542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1305:0,90,255:29,0 chr1 6272742 . A . PASS END=6272793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,137,255:40,0 chr1 6273126 . C . PASS END=6273130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 6273131 . C . PASS END=6273140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 6273141 . T . PASS END=6273142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:27,0 chr1 6273143 . C . PASS END=6273143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6273144 . T . PASS END=6273144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 6273145 . C . PASS END=6273156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1141:0,87,255:31,0 chr1 6273157 . G . PASS END=6273157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 6273158 . G . PASS END=6273185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1156:0,90,255:31,0 chr1 6273186 . A . PASS END=6273186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 6273187 . G . PASS END=6273193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 6273194 . A . PASS END=6273218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:25,0 chr1 6273219 . A . PASS END=6273219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr1 6273220 . G . PASS END=6273221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6273222 . T . PASS END=6273222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 6273223 . G . PASS END=6273224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6273225 . A . PASS END=6273225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,754:0,33,255:20,0 chr1 6273226 . G . PASS END=6273238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 6273239 . C . PASS END=6273243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 6278349 . G . PASS END=6278376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1202:0,83,255:33,0 chr1 6278377 . G . PASS END=6278384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr1 6278385 . A . PASS END=6278396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:26,0 chr1 6278397 . C . PASS END=6278400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6278401 . G . PASS END=6278413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 6278414 . A G, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,11,0:0,16,0:78:166,81,0,1046,81,1046:255,81,0:0,0:1.2826e+02,7.8262e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,14:0,0,15,12 chr1 6278415 . C . PASS END=6278429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:25,0 chr1 6279296 . G . PASS END=6279312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,644:0,54,255:18,0 chr1 6279313 . T . PASS END=6279332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,662:0,60,255:23,0 chr1 6279333 . A . PASS END=6279347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,849:0,72,255:26,0 chr1 6279348 . G . PASS END=6279349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 6279350 . A . PASS END=6279350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 6279351 . A . PASS END=6279354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 6279355 . G . PASS END=6279355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 6279356 . C . PASS END=6279369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 6279370 . G C, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,17,0:0,12,0:84:172,87,0,1116,87,1116:255,87,0:0,0:1.3428e+02,8.4279e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,15:0,0,14,15 chr1 6279371 . C . PASS END=6279397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 6279398 . T . PASS END=6279398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 6279399 . A . PASS END=6279407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 6279408 . C . PASS END=6279420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6279421 . A . PASS END=6279432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 6279433 . G . PASS END=6279434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6279435 . G . PASS END=6279452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr1 6279453 . G . PASS END=6279467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:11:0,30,450:0,33,255:11,0 chr1 6285140 . T . PASS END=6285177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:29:0,86,1094:0,86,255:38,0 chr1 6285178 . C . PASS END=6285179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:76:38:0,76,1372:0,76,255:38,0 chr1 6285180 . G . PASS END=6285253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1363:0,81,255:40,0 chr1 6285254 . T . PASS END=6285254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:36,0 chr1 6285255 . C . PASS END=6285303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1172:0,82,255:38,0 chr1 6285304 . T . PASS END=6285315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:23:0,60,900:0,69,255:23,0 chr1 6285316 . G . PASS END=6285322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:19,0 chr1 6291962 . C . PASS END=6291969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1111:0,93,255:35,0 chr1 6291970 . C . PASS END=6292154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1256:0,92,255:40,0 chr1 6292155 . C . PASS END=6292174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:24:0,65,892:0,65,255:26,0 chr1 6292175 . C . PASS END=6292175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 6292176 . A . PASS END=6292178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 6292179 . T . PASS END=6292179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 6293534 . C . PASS END=6293703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:35:0,84,1260:0,85,255:40,0 chr1 6294505 . T . PASS END=6294571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:38:0,84,1350:0,84,255:40,0 chr1 6294946 . C . PASS END=6295034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,102,1458:0,102,255:40,0 chr1 6295777 . C . PASS END=6295786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr1 6295787 . G . PASS END=6295789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 6295790 . G . PASS END=6295823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 6295824 . C . PASS END=6295834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 6295835 . A . PASS END=6295856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 6295857 . G . PASS END=6295898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 6295899 . C . PASS END=6295917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:6,0 chr1 6295918 . G . LowGQ END=6295971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,39:3,0 chr1 6304426 . A . PASS END=6304455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1117:0,93,255:34,0 chr1 6304456 . G . PASS END=6304456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:33,0 chr1 6304457 . T . PASS END=6304457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1341:0,95,255:32,0 chr1 6304458 . G . PASS END=6304458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:32,0 chr1 6304459 . T . PASS END=6304461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1371:0,95,255:34,0 chr1 6304462 . C . PASS END=6304462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1235:0,34,255:33,0 chr1 6304463 . T . PASS END=6304464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1333:0,95,255:34,0 chr1 6304465 . G . PASS END=6304465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1316:0,59,255:34,0 chr1 6304466 . A . PASS END=6304466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1339:0,95,255:35,0 chr1 6304467 . G . PASS END=6304467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 6304468 . C . PASS END=6304469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1333:0,95,255:35,0 chr1 6304470 . G . PASS END=6304470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1357:0,70,255:35,0 chr1 6304471 . C . PASS END=6304474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1355:0,84,255:36,0 chr1 6304475 . A . PASS END=6304477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1341:0,84,255:37,0 chr1 6304478 . C . PASS END=6304478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1357:0,48,255:34,0 chr1 6304479 . G . PASS END=6304487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:36:0,95,1303:0,95,255:36,0 chr1 6304488 . G . PASS END=6304488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1318:0,67,255:32,0 chr1 6304489 . A . PASS END=6304493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:97:38:0,97,1107:0,97,255:33,0 chr1 6304494 . C . PASS END=6304495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1288:0,70,255:31,0 chr1 6304496 . A . PASS END=6304497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:40:0,87,1390:0,87,255:34,0 chr1 6304498 . T . PASS END=6304498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:12:40:0,12,1326:0,12,255:32,0 chr1 6304499 . C . PASS END=6304501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1296:0,81,255:33,0 chr1 6304502 . A . PASS END=6304502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1111:0,61,255:27,0 chr1 6304503 . C . PASS END=6304503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,95,255:29,0 chr1 6304504 . C . PASS END=6304504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,1114:0,28,255:23,0 chr1 6304505 . A . PASS END=6304505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:14:37:0,14,1099:0,14,255:24,0 chr1 6304506 . G . PASS END=6304506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:39:0,93,1395:0,100,255:31,0 chr1 6304608 . A . PASS END=6304689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:44:0,81,1215:0,99,255:40,0 chr1 6305170 . G . PASS END=6305170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 6305171 . G . PASS END=6305172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 6305173 . T . PASS END=6305173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 6305174 . C . PASS END=6305175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 6305176 . G . PASS END=6305177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 6305178 . C . PASS END=6305179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 6305180 . T . PASS END=6305181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:4:7:0,4,216:0,4,216:7,0 chr1 6305182 . T . PASS END=6305182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 6305183 . G . PASS END=6305183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 6305184 . C . PASS END=6305184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 6305185 . C . PASS END=6305186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 6305187 . A . PASS END=6305187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 6305188 . G . PASS END=6305188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 6305189 . G . PASS END=6305190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 6305191 . G . LowGQ END=6305191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 6305192 . A . PASS END=6305192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 6305193 . G . PASS END=6305194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 6305195 . C . PASS END=6305195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:12,0 chr1 6305196 . G . PASS END=6305196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 6305197 . A . PASS END=6305197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 6305198 . G . PASS END=6305198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 6305199 . C . PASS END=6305201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 6305202 . C . PASS END=6305203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,488:0,26,255:14,0 chr1 6305204 . G . PASS END=6305204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 6305205 . T . PASS END=6305205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 6305206 . C . PASS END=6305206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 6305207 . G . PASS END=6305207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr1 6305208 . G . PASS END=6305208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 6305209 . G . PASS END=6305209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 6305210 . C . PASS END=6305210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 6305211 . T . PASS END=6305213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 6305214 . C . PASS END=6305216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 6305217 . A . PASS END=6305218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 6305219 . C . PASS END=6305219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6305220 . T . PASS END=6305220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr1 6305221 . G . PASS END=6305230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 6305231 . C . PASS END=6305231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 6305232 . G . PASS END=6305242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,596:0,45,255:16,0 chr1 6305243 . C . PASS END=6305243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 6305244 . C . PASS END=6305257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 6305258 . T . PASS END=6305265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 6305266 . G . PASS END=6305269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6305270 . C . PASS END=6305270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 6305271 . G . PASS END=6305276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 6305277 . C . PASS END=6305277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 6305278 . G . PASS END=6305282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 6305283 . C . PASS END=6305283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 6305284 . C . PASS END=6305292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 6305293 . C . PASS END=6305293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 6305294 . C . PASS END=6305312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,595:0,51,255:18,0 chr1 6305313 . A . PASS END=6305340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,870:0,61,255:26,0 chr1 6305341 . A . PASS END=6305341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 6305342 . G . PASS END=6305348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:26,0 chr1 6305349 . G . PASS END=6305350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 6305351 . G . PASS END=6305351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 6305352 . C . PASS END=6305363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 6305364 . T . PASS END=6305364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 6305365 . G . PASS END=6305374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 6305375 . C . PASS END=6305375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 6305376 . G . PASS END=6305377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6305378 . C . PASS END=6305378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 6305379 . T . PASS END=6305382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6305383 . C . PASS END=6305384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,942:0,67,255:26,0 chr1 6305385 . C . PASS END=6305385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6305386 . C . PASS END=6305386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 6305387 . T . PASS END=6305398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,895:0,81,255:27,0 chr1 6305399 . C . PASS END=6305399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:25,0 chr1 6305400 . G . PASS END=6305400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,848:0,64,255:26,0 chr1 6305401 . G . PASS END=6305403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr1 6305404 . G . PASS END=6305404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:24,0 chr1 6305405 . C . PASS END=6305405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6305406 . C . PASS END=6305406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:26,0 chr1 6305407 . C . PASS END=6305407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6305408 . G . PASS END=6305408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,881:0,56,255:25,0 chr1 6305409 . C . PASS END=6305419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,980:0,70,255:26,0 chr1 6305420 . A . PASS END=6305420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:25,0 chr1 6305421 . C . PASS END=6305424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:25,0 chr1 6305425 . T . PASS END=6305425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,701:0,44,255:23,0 chr1 6305426 . G . PASS END=6305433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,923:0,75,255:25,0 chr1 6305434 . T . PASS END=6305434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 6305435 . C . PASS END=6305439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:77:26:0,77,830:0,77,255:26,0 chr1 6305440 . A . PASS END=6305441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 6305442 . A . PASS END=6305442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 6305443 . G . PASS END=6305443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,768:0,31,255:21,0 chr1 6305444 . T . PASS END=6305452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,909:0,64,255:24,0 chr1 6305453 . C . PASS END=6305454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,810:0,67,255:18,0 chr1 6305455 . C . PASS END=6305455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:18,0 chr1 6305456 . G . PASS END=6305463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 6305464 . G . PASS END=6305466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6305467 . T . PASS END=6305468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6305469 . C . PASS END=6305503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,786:0,66,255:23,0 chr1 6305504 . G . PASS END=6305538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 6305539 . G . PASS END=6305539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 6305540 . G . PASS END=6305542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 6305543 . A . PASS END=6305567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 6309398 . C . PASS END=6309417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,164:6,0 chr1 6309418 . A . PASS END=6309418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 6309419 . G . PASS END=6309433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 6309434 . G . PASS END=6309446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 6309447 . G . PASS END=6309447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 6309448 . A . PASS END=6309448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 6309449 . C . PASS END=6309449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 6309450 . T . PASS END=6309452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 6309453 . G . PASS END=6309486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:11,0 chr1 6309487 . C . LowGQ END=6309487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,311:6,0,255:9,0 chr1 6309488 . G . PASS END=6309492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 6309493 . C . LowGQ END=6309493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 6309494 . C . PASS END=6309494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 6309495 . G . LowGQ END=6309495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,288:19,0,255:9,0 chr1 6309496 . C . PASS END=6309497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 6309498 . G . LowGQ END=6309500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,321:3,0,255:11,0 chr1 6309501 . C . PASS END=6309502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 6309503 . C . LowGQ END=6309504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 6309505 . G . PASS END=6309506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 6309507 . C . LowGQ END=6309510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,412:0,0,255:11,0 chr1 6309511 . C . PASS END=6309511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6309512 . G . LowGQ END=6309513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:9,0 chr1 6309514 . G . PASS END=6309514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6309515 . C . LowGQ END=6309517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:12:0,0,371:0,0,255:9,0 chr1 6309518 . G . PASS END=6309518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 6309519 . C . LowGQ END=6309520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 6309521 . C . PASS END=6309522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:10,0 chr1 6309523 . A . LowGQ END=6309523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,294:9,0,255:9,0 chr1 6309524 . C . PASS END=6309527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 6309528 . G . PASS END=6309539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 6309540 . G . LowGQ END=6309540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:7,0 chr1 6309541 . G . PASS END=6309544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 6309545 . C . PASS END=6309561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 6309562 . A . PASS END=6309563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6309564 . T . PASS END=6309564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,300:0,14,255:8,0 chr1 6309565 . G . PASS END=6309568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 6309569 . A . PASS END=6309599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,111:0,12,111:6,0 chr1 6309600 . C . PASS END=6309609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 6309610 . G . PASS END=6309630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 6309631 . C . PASS END=6309632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,180:5,0 chr1 6309633 . G . PASS END=6309633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 6309634 . C . PASS END=6309641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:4,0 chr1 6309642 . G . PASS END=6309642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 6309643 . G . PASS END=6309658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 6309659 . G . LowGQ END=6309659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 6309660 . G . PASS END=6309667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 6309668 . C T, 0.63 DRAGENSnpHardQUAL DP=4;MQ=250.00;MQRankSum=0.727;ReadPosRankSum=0.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:3,1,0:0.250,0.000:4:1,1,0:2,0,0:9:27,0,50,36,107,143:27,0,104:3,0:6.3497e-01,8.6651e+00,6.1665e+01,4.4434e+01,1.5073e+02,1.5473e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,1,0,1:2,1,0,1 chr1 6309669 . C . PASS END=6309673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 6309674 . C . PASS END=6309705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,116:3,0 chr1 6309706 . A . LowDepth;LowGQ END=6309872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 6309873 . G . PASS END=6309882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 6309883 . G . LowGQ END=6309883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr1 6309884 . T . PASS END=6309947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 6309948 . A . PASS END=6309955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 6309956 . C . PASS END=6309956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 6309957 . A . PASS END=6309959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 6309960 . G . PASS END=6309984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 6309985 . A . PASS END=6309985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 6309986 . G . PASS END=6309990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 6309991 . G . PASS END=6310000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 6310001 . G . PASS END=6310049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 6310050 . C . PASS END=6310058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6310059 . G . PASS END=6310059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 6310060 . G . PASS END=6310063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 6310299 . T . PASS END=6310304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 6310305 . G . PASS END=6310321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:8,0 chr1 6310322 . T . LowGQ END=6310324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:9:0,0,263:6,0,255:10,0 chr1 6310325 . C . PASS END=6310325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 6310326 . G . LowGQ END=6310326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 6310327 . G . PASS END=6310327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 6310328 . T . LowGQ END=6310329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,324:3,0,255:11,0 chr1 6310330 . G . PASS END=6310330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 6310331 . G . LowGQ END=6310334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 6310335 . C . PASS END=6310337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 6310338 . C . PASS END=6310398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,531:0,42,255:19,0 chr1 6310399 . A . PASS END=6310416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr1 6310417 . T . PASS END=6310437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 6310438 . T . PASS END=6310438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:16,0 chr1 6310439 . C . PASS END=6310447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:19,0 chr1 6310448 . C . PASS END=6310448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 6310449 . A . PASS END=6310450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6310451 . G . PASS END=6310456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:17,0 chr1 6310457 . C . PASS END=6310457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 6310458 . T . PASS END=6310458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:14,0 chr1 6310459 . G . PASS END=6310461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 6310462 . A . PASS END=6310499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 6310500 . C . PASS END=6310503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6310504 . A . PASS END=6310504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 6310505 . G . PASS END=6310508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 6310509 . T . PASS END=6310510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 6310511 . G . PASS END=6310516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 6310517 . T . PASS END=6310517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 6310518 . G . PASS END=6310520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 6310521 . C . PASS END=6310524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 6310525 . T . PASS END=6310526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 6310527 . C . PASS END=6310530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 6310531 . G . PASS END=6310532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,480:0,26,255:12,0 chr1 6310533 . C . PASS END=6310534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6310535 . G . PASS END=6310538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 6310539 . T . PASS END=6310539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 6310540 . G . PASS END=6310554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 6310555 . A . PASS END=6310555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 6310556 . G . PASS END=6310558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:18,0 chr1 6310559 . C . PASS END=6310559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 6310560 . C . PASS END=6310567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,666:0,54,255:19,0 chr1 6310568 . G . PASS END=6310582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 6310583 . A . PASS END=6310583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr1 6310584 . C . PASS END=6310588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 6310589 . C . PASS END=6310630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,562:0,44,255:18,0 chr1 6310631 . C . PASS END=6310631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 6310632 . C . PASS END=6310634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6310635 . G . PASS END=6310635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 6310636 . G . PASS END=6310638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 6310639 . C . PASS END=6310639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 6310640 . G . PASS END=6310646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6310647 . C . PASS END=6310647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 6310648 . A . PASS END=6310649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6310650 . C . PASS END=6310651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 6310652 . G . PASS END=6310652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 6310653 . G . PASS END=6310658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 6310659 . G . PASS END=6310659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 6310660 . G . PASS END=6310660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 6310661 . A . PASS END=6310661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 6310662 . G . PASS END=6310664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 6310665 . G . LowGQ END=6310665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,344:0,0,255:12,0 chr1 6310666 . C . PASS END=6310666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 6310667 . C . PASS END=6310667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 6310668 . A . LowGQ END=6310668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr1 6310669 . C . PASS END=6310669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 6310670 . C . PASS END=6310670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 6310671 . T . LowGQ END=6310672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,316:0,0,255:12,0 chr1 6310673 . C . PASS END=6310674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 6310675 . A . LowGQ END=6310678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,330:0,0,255:11,0 chr1 6310679 . T . PASS END=6310679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 6310680 . G . LowGQ END=6310681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,379:0,0,255:10,0 chr1 6310682 . T . PASS END=6310682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,372:0,22,255:8,0 chr1 6310683 . C . PASS END=6310683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:15:13:0,15,225:0,39,255:5,0 chr1 6310684 . T . LowGQ END=6310684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:4,0 chr1 6311398 . C . PASS END=6311440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,402:0,33,255:13,0 chr1 6311441 . C . PASS END=6311462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:19,0 chr1 6311463 . G . PASS END=6311492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:22,0 chr1 6311493 . A . PASS END=6311514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,765:0,50,255:19,0 chr1 6311515 . C . PASS END=6311541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 6311542 . C . PASS END=6311542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 6311543 . C . PASS END=6311569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 6311570 . C . PASS END=6311585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 6311586 . A . PASS END=6311586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr1 6311587 . C . PASS END=6311590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 6313778 . C . PASS END=6313779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 6313780 . G . PASS END=6313787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 6313788 . A . PASS END=6313788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 6313789 . A . PASS END=6313793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:25,0 chr1 6313794 . A . PASS END=6313794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr1 6313795 . T . PASS END=6313801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 6313802 . G . PASS END=6313835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,984:0,81,255:31,0 chr1 6313836 . G . PASS END=6313836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 6313837 . T . PASS END=6313848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:28,0 chr1 6313849 . A . PASS END=6313850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:26,0 chr1 6313851 . G . PASS END=6313851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6313852 . T . PASS END=6313852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,947:0,53,255:26,0 chr1 6313853 . T . PASS END=6313854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6313855 . T . PASS END=6313868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 6313869 . C . PASS END=6313872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 6313873 . C . PASS END=6313875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 6313876 . T . PASS END=6313878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 6313879 . A . PASS END=6313884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 6313885 . G . PASS END=6313885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6313886 . C . PASS END=6313888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6313889 . C . PASS END=6313908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,50,255:19,0 chr1 6313909 . C . PASS END=6313914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:20,0 chr1 6313915 . T . PASS END=6313993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,44,255:19,0 chr1 6313994 . G . PASS END=6313996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 6313997 . G . PASS END=6314036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:16,0 chr1 6314037 . A . PASS END=6314037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 6314038 . A . PASS END=6314042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,607:0,48,255:17,0 chr1 6314043 . A . PASS END=6314043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:12,0 chr1 6314044 . C . PASS END=6314049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 6314050 . A . PASS END=6314070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,545:0,45,255:16,0 chr1 6314071 . C . PASS END=6314071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 6314072 . G . PASS END=6314076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6314077 . A . PASS END=6314077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 6314078 . G . PASS END=6314080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 6314081 . G . PASS END=6314081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 6314082 . C . PASS END=6314083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 6314084 . G . PASS END=6314084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr1 6314085 . C . PASS END=6314087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 6314088 . T . PASS END=6314088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 6314089 . G . PASS END=6314103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,49,255:19,0 chr1 6314104 . C . PASS END=6314106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 6314107 . T . PASS END=6314107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 6314108 . G . PASS END=6314114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 6314115 . T . PASS END=6314115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 6314116 . G . PASS END=6314123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 6314124 . A . PASS END=6314124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 6314125 . C . PASS END=6314133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr1 6314134 . G . PASS END=6314134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 6314135 . G . PASS END=6314146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:26,0 chr1 6314147 . G . PASS END=6314149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 6314150 . G . PASS END=6314177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,67,255:26,0 chr1 6314178 . T . PASS END=6314207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,690:0,56,255:20,0 chr1 6314610 . C . PASS END=6314625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1135:0,96,255:34,0 chr1 6314626 . A . PASS END=6314626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1234:0,77,255:33,0 chr1 6314627 . G . PASS END=6314739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:33:0,87,1235:0,88,255:40,0 chr1 6314740 . A . PASS END=6314740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1107:0,66,255:27,0 chr1 6314741 . G . PASS END=6314743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1233:0,86,255:30,0 chr1 6314744 . G . PASS END=6314744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 6314745 . G . PASS END=6314749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 6314750 . C . PASS END=6314750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 6314751 . T . PASS END=6314768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 6314769 . A . PASS END=6314786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:26,0 chr1 6314787 . G . PASS END=6314787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 6314788 . G . PASS END=6314789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 6314790 . A . PASS END=6314795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,56,255:19,0 chr1 6314796 . A . PASS END=6314796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:15,0 chr1 6314797 . C . PASS END=6314816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,675:0,44,255:18,0 chr1 6314817 . G . PASS END=6314818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 6314819 . G . PASS END=6314836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,46,255:17,0 chr1 6314837 . C . PASS END=6314837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr1 6314838 . T . PASS END=6314849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr1 6314850 . C . PASS END=6314853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 6314854 . T . PASS END=6314854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:11,0 chr1 6314855 . C . PASS END=6314873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 6314874 . C . PASS END=6314880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 6314881 . T . PASS END=6314882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6314883 . C . PASS END=6314900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 6314901 . A . PASS END=6314906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 6314907 . A . PASS END=6314926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 6314927 . G . PASS END=6314958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 6314959 . C . PASS END=6314965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 6324657 . C . PASS END=6324660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 6324661 . G . PASS END=6324661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6324662 . G . PASS END=6324662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 6324663 . C . PASS END=6324669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:31,0 chr1 6324670 . T . PASS END=6324670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 6324671 . C . PASS END=6324755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1141:0,93,255:40,0 chr1 6341162 . C . PASS END=6341162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 6341163 . A . PASS END=6341163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 6341164 . C . PASS END=6341167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,870:0,61,255:26,0 chr1 6341168 . C . PASS END=6341168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 6341169 . T . PASS END=6341169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 6341170 . G . PASS END=6341170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 6341171 . G . PASS END=6341172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,984:0,68,255:26,0 chr1 6341173 . G . PASS END=6341173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6341174 . C . PASS END=6341181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1047:0,71,255:26,0 chr1 6341182 . G . PASS END=6341193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1119:0,80,255:31,0 chr1 6341194 . C . PASS END=6341194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 6341195 . C . PASS END=6341312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:30:0,83,1133:0,83,255:40,0 chr1 6341313 . A . PASS END=6341328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:24:0,72,848:0,72,255:25,0 chr1 6341329 . A . PASS END=6341330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 6341331 . A . PASS END=6341331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:22,0 chr1 6341332 . T . PASS END=6341333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6341334 . G . PASS END=6341334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 6341335 . T . PASS END=6341336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6341337 . A . PASS END=6341337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 6341338 . T . PASS END=6341339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6341340 . A . PASS END=6341340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,712:0,22,255:19,0 chr1 6341341 . C . PASS END=6341346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 6342784 . A . PASS END=6342793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 6342794 . T . PASS END=6342794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 6342795 . C . PASS END=6342803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 6342804 . G . PASS END=6342804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 6342805 . C . PASS END=6342811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:18,0 chr1 6342812 . A . PASS END=6342812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 6342813 . G . PASS END=6342825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:19,0 chr1 6342826 . G . PASS END=6342827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 6342828 . G . PASS END=6342841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 6342842 . C . PASS END=6342849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6342850 . A . PASS END=6342852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6342853 . T . PASS END=6342856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6342941 . C . PASS END=6342941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6342942 . T . PASS END=6342943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 6342944 . A . PASS END=6342945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6342946 . G . PASS END=6342946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:20,0 chr1 6342947 . A . PASS END=6342948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 6354924 . C . PASS END=6354942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 6354943 . A . PASS END=6354970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr1 6354971 . A . PASS END=6354971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr1 6354972 . C . PASS END=6354973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6354974 . A . PASS END=6354979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,994:0,70,255:25,0 chr1 6354980 . G . PASS END=6354985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 6354986 . C . PASS END=6354986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 6354987 . A . PASS END=6354995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 6354996 . C . PASS END=6354996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 6354997 . A . PASS END=6355000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1147:0,90,255:30,0 chr1 6355001 . A . PASS END=6355001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:25,0 chr1 6355002 . C . PASS END=6355004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6355005 . T . PASS END=6355022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,969:0,65,255:26,0 chr1 6355023 . T . PASS END=6355030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 6355031 . A . PASS END=6355040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:24:0,48,720:0,59,255:19,0 chr1 6378552 . C . PASS END=6378561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 6378562 . A . PASS END=6378562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 6378563 . A . PASS END=6378579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,854:0,62,255:26,0 chr1 6378580 . G . PASS END=6378597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 6378598 . G . PASS END=6378598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 6378599 . T . PASS END=6378603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 6378604 . C . PASS END=6378604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 6378605 . A . PASS END=6378605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6378606 . A . PASS END=6378623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,71,255:26,0 chr1 6378624 . T . PASS END=6378624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 6378625 . G . PASS END=6378627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 6378628 . A . PASS END=6378628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,786:0,41,255:20,0 chr1 6378629 . G . PASS END=6378632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6378633 . T . PASS END=6378633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 6378634 . C . PASS END=6378636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6378637 . C . PASS END=6378638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 6387359 . C . PASS END=6387359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 6387360 . T . PASS END=6387360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 6387361 . G . PASS END=6387473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:30:0,90,1117:0,90,255:40,0 chr1 6393537 . C . PASS END=6393628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1209:0,89,255:40,0 chr1 6399493 . C . PASS END=6399510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 6399511 . A . PASS END=6399511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 6399512 . C . PASS END=6399513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6399514 . T . PASS END=6399528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 6399529 . C . PASS END=6399553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,686:0,60,255:26,0 chr1 6399554 . G . PASS END=6399563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,944:0,84,255:28,0 chr1 6399564 . G . PASS END=6399564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 6399565 . C . PASS END=6399579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 6399580 . C . PASS END=6399586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 6399587 . G . PASS END=6399631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1078:0,84,255:31,0 chr1 6399632 . G . PASS END=6399646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:24,0 chr1 6399647 . C . PASS END=6399649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:16,0 chr1 6409809 . C . PASS END=6409831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:19,0 chr1 6409832 . G . PASS END=6409832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 6409833 . G . PASS END=6409833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 6409834 . G . PASS END=6409859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:23,0 chr1 6409860 . G . PASS END=6409860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 6409861 . A . PASS END=6409879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 6409880 . C . PASS END=6409911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,630:0,40,255:19,0 chr1 6409912 . T . PASS END=6409912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 6409913 . C . PASS END=6409922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6409923 . G . PASS END=6409926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6418886 . C . PASS END=6418886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 6418887 . T . PASS END=6418887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 6418888 . G . PASS END=6418899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1131:0,80,255:30,0 chr1 6418900 . A . PASS END=6418901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1092:0,74,255:29,0 chr1 6418902 . C . PASS END=6418905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1180:0,83,255:31,0 chr1 6420630 . T . PASS END=6420712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:41:0,85,1399:0,85,255:40,0 chr1 6445554 . C . PASS END=6445555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 6445556 . T . PASS END=6445556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 6445557 . C . PASS END=6445569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:26,0 chr1 6445570 . C . PASS END=6445570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 6445571 . T . PASS END=6445574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6445575 . C . PASS END=6445577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 6445578 . G . PASS END=6445578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 6445579 . G . PASS END=6445584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 6445585 . G . PASS END=6445585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 6445586 . A . PASS END=6445726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:29:0,86,908:0,86,255:40,0 chr1 6453317 . C . PASS END=6453321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 6453322 . G . PASS END=6453326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 6453327 . G . PASS END=6453330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 6453331 . G . PASS END=6453331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 6453332 . G . PASS END=6453344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 6453345 . C . PASS END=6453345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6453346 . G . PASS END=6453379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:18,0 chr1 6453380 . G . PASS END=6453380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 6453381 . C . PASS END=6453393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 6453394 . C . PASS END=6453394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 6453395 . G . PASS END=6453403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 6453404 . A . PASS END=6453431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 6453432 . C . PASS END=6453438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6453439 . A . PASS END=6453439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 6453440 . A . PASS END=6453447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 6453448 . G . PASS END=6453459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 6473253 . T . PASS END=6473256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6473257 . G . PASS END=6473293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:37,0 chr1 6473294 . A G, 48.81 PASS DP=39;MQ=249.21;MQRankSum=5.282;ReadPosRankSum=2.875;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,17,0:0.436,0.000:39:10,7,0:12,10,0:47:84,0,50,596,720,1316:255,0,255:18,0:4.8808e+01,7.8953e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,12,5:9,13,4,13 chr1 6473295 . G . PASS END=6473313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:32:0,92,1308:0,92,255:33,0 chr1 6473314 . G . PASS END=6473314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 6473315 . G . PASS END=6473315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 6473316 . A . PASS END=6473316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:30,0 chr1 6473317 . A . PASS END=6473330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 6473331 . G . PASS END=6473331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 6473332 . C . PASS END=6473335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 6473336 . A . PASS END=6473337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 6473338 . G . PASS END=6473342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 6478933 . C . PASS END=6478948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 6478949 . A . PASS END=6478949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 6478950 . G . PASS END=6479015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:18,0 chr1 6479016 . C . PASS END=6479016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 6479017 . G . PASS END=6479021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 6479022 . C . PASS END=6479027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 6479028 . C . PASS END=6479037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 6479038 . C . PASS END=6479065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr1 6479066 . C . PASS END=6479089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 6479090 . C . PASS END=6479092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 6479093 . C . PASS END=6479100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6479101 . G . PASS END=6479127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 6479128 . G . PASS END=6479130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 6479131 . C . PASS END=6479142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 6479143 . G . PASS END=6479143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 6479144 . C . PASS END=6479179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 6479180 . G . PASS END=6479180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,418:0,8,255:11,0 chr1 6479181 . C . PASS END=6479182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 6479183 . C . PASS END=6479188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6479189 . C . PASS END=6479189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6479190 . C . PASS END=6479196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 6479197 . G . PASS END=6479197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 6479198 . T . PASS END=6479198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr1 6479199 . A . PASS END=6479209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 6479210 . G . PASS END=6479210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 6479211 . G . PASS END=6479211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 6479212 . C . PASS END=6479212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:16,0 chr1 6479213 . A . PASS END=6479213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 6479293 . T . PASS END=6479298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:26,0 chr1 6479299 . A . PASS END=6479300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 6479301 . G . PASS END=6479308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6479309 . G . PASS END=6479312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6479313 . T . PASS END=6479313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6479314 . G . PASS END=6479321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 6479322 . A . PASS END=6479322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr1 6479323 . G . PASS END=6479375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 6479376 . T . PASS END=6479376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:20,0 chr1 6479377 . C . PASS END=6479379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 6479380 . T . PASS END=6479380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:19,0 chr1 6479381 . A . PASS END=6479384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 6479385 . T . PASS END=6479385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:20,0 chr1 6479386 . C . PASS END=6479390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6479391 . A . PASS END=6479400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr1 6479667 . C . PASS END=6479669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 6479670 . C . PASS END=6479670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6479671 . C . PASS END=6479673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:17,0 chr1 6479674 . C . PASS END=6479674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 6479675 . C . PASS END=6479762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:19,0 chr1 6479836 . C . PASS END=6479865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:8,0 chr1 6479866 . G . PASS END=6479879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,188:6,0 chr1 6479880 . T . PASS END=6479880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,233:3,0 chr1 6485016 . A . PASS END=6485049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 6485050 . A . LowGQ END=6485050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 6485051 . G . PASS END=6485061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,210:6,0 chr1 6485062 . A . PASS END=6485064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:6:0,9,135:0,18,225:3,0 chr1 6485065 . T . PASS END=6485069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr1 6485070 . A . LowGQ END=6485070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:4,0 chr1 6485071 . G . PASS END=6485105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 6485106 . C . PASS END=6485129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:8,0 chr1 6485130 . C . PASS END=6485142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 6485143 . C . PASS END=6485144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6485145 . G . PASS END=6485195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,33,255:13,0 chr1 6485196 . C . LowGQ END=6485196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 6485197 . T . PASS END=6485211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,441:0,36,255:12,0 chr1 6485212 . G . PASS END=6485212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 6485213 . C . PASS END=6485223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 6485224 . G . PASS END=6485238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,635:0,51,255:19,0 chr1 6485239 . A . PASS END=6485239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 6485240 . C . PASS END=6485259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,643:0,40,255:18,0 chr1 6485260 . A . PASS END=6485260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 6485261 . C . PASS END=6485267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 6485268 . T . PASS END=6485279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 6485280 . C . PASS END=6485285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 6485286 . T . PASS END=6485299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr1 6485300 . C . PASS END=6485300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 6485301 . A . PASS END=6485306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 6485307 . C . PASS END=6485307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:10,0 chr1 6485308 . A . PASS END=6485309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 6488286 . G . PASS END=6488294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr1 6488295 . A . PASS END=6488295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 6488296 . A . PASS END=6488309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 6488310 . G . PASS END=6488408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:18,0 chr1 6488409 . C . PASS END=6488470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 6488471 . C . PASS END=6488473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 6488474 . C . PASS END=6488474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 6488475 . C . PASS END=6488477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr1 6488478 . G . PASS END=6488479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 6500314 . G . PASS END=6500316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6500317 . A . PASS END=6500317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 6500318 . G . PASS END=6500320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6500321 . A . PASS END=6500321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 6500322 . A . PASS END=6500322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 6500323 . T . PASS END=6500323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:19,0 chr1 6500324 . G . PASS END=6500327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 6500328 . A . PASS END=6500328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr1 6500329 . A . PASS END=6500329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,620:0,5,255:18,0 chr1 6500330 . A . PASS END=6500335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,703:0,63,255:22,0 chr1 6500336 . A . PASS END=6500336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,668:0,27,255:21,0 chr1 6500337 . A . PASS END=6500340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:23,0 chr1 6500341 . T . PASS END=6500341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 6500342 . G . PASS END=6500342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 6500343 . C . PASS END=6500343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 6500344 . C . PASS END=6500344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6500345 . A . PASS END=6500345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:20,0 chr1 6500346 . C . PASS END=6500351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6500352 . T . PASS END=6500352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr1 6500353 . G . PASS END=6500353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 6500354 . T . PASS END=6500354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 6500355 . A . PASS END=6500355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:20,0 chr1 6500356 . C . PASS END=6500372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr1 6500373 . G . PASS END=6500373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr1 6500374 . C . PASS END=6500374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6500375 . C . PASS END=6500376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,776:0,50,255:21,0 chr1 6500377 . C . PASS END=6500378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6500379 . T . PASS END=6500379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:19,0 chr1 6500380 . G . PASS END=6500386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 6500387 . A . PASS END=6500387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 6500388 . C . PASS END=6500390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6500391 . A . PASS END=6500391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:20,0 chr1 6500392 . G . PASS END=6500392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6500393 . T . PASS END=6500393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 6500394 . A . PASS END=6500399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6500400 . T . PASS END=6500400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 6500401 . G . PASS END=6500401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 6500402 . C . PASS END=6500402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6500403 . A . PASS END=6500404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6500405 . G . PASS END=6500405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6500406 . A . PASS END=6500406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:18,0 chr1 6500407 . A . PASS END=6500425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 6500426 . G . PASS END=6500426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 6500427 . C . PASS END=6500445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 6500446 . G . PASS END=6500479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 6500480 . A . PASS END=6500481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,405:0,23,255:9,0 chr1 6500482 . C . PASS END=6500483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr1 6500484 . C . PASS END=6500486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 6500487 . T . PASS END=6500500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:6:0,15,225:0,18,210:6,0 chr1 6500686 . G . PASS END=6500691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6500692 . T . PASS END=6500693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,715:0,47,255:21,0 chr1 6500694 . C . PASS END=6500694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6500695 . A . PASS END=6500695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:19,0 chr1 6500696 . C . PASS END=6500696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 6500697 . C . PASS END=6500697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6500698 . G . PASS END=6500698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 6500699 . A . PASS END=6500699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,65,255:20,0 chr1 6500700 . C . PASS END=6500700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 6500701 . G . PASS END=6500701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6500702 . T . PASS END=6500702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 6500703 . G . PASS END=6500704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr1 6500705 . G . PASS END=6500705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:19,0 chr1 6500706 . C . PASS END=6500730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,841:0,66,255:24,0 chr1 6500731 . G . PASS END=6500731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 6500732 . C . PASS END=6500745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:25,0 chr1 6500746 . T . LowGQ END=6500746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:0:26:0,0,740:0,0,255:23,0 chr1 6500747 . T . PASS END=6500752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 6500753 . C . PASS END=6500753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:20,0 chr1 6500754 . G . PASS END=6500755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 6500756 . G . PASS END=6500757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 6500758 . C . PASS END=6500764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 6500765 . A . PASS END=6500765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:21,0 chr1 6500766 . C . PASS END=6500766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6500767 . A . PASS END=6500767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 6500768 . C . PASS END=6500769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 6500770 . A . PASS END=6500770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:18,0 chr1 6500771 . A . PASS END=6500771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:19,0 chr1 6500772 . G . PASS END=6500773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 6500774 . T . PASS END=6500774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 6500775 . G . PASS END=6500777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6500778 . C . PASS END=6500778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 6500779 . A . PASS END=6500780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6500781 . C . PASS END=6500781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 6500782 . T . PASS END=6500792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,917:0,69,255:25,0 chr1 6500793 . G . PASS END=6500793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 6500794 . C . PASS END=6500795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6500796 . C . PASS END=6500796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 6500797 . G . PASS END=6500798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6500799 . C . PASS END=6500800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 6500801 . G . PASS END=6500805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr1 6500806 . A . PASS END=6500806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 6500807 . T . PASS END=6500809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 6500810 . C . PASS END=6500810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 6500811 . G . PASS END=6500813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:22,0 chr1 6500814 . T . PASS END=6500815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 6500816 . A . PASS END=6500816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:19,0 chr1 6500817 . C . PASS END=6500846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 6500847 . C . PASS END=6500856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 6500857 . G . PASS END=6500858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 6500859 . G . PASS END=6500860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 6500861 . A . PASS END=6500868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:14:0,26,405:0,26,255:9,0 chr1 6500994 . T . PASS END=6500997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 6500998 . G . PASS END=6501003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 6501004 . T . PASS END=6501004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 6501005 . C . PASS END=6501006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 6501007 . T . PASS END=6501007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 6501008 . G . PASS END=6501008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 6501009 . G . PASS END=6501009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 6501010 . T . PASS END=6501010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 6501011 . A . PASS END=6501011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 6501012 . G . PASS END=6501025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 6501026 . G . PASS END=6501038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 6501039 . G . PASS END=6501039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 6501040 . A . PASS END=6501040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 6501041 . C . PASS END=6501043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6501044 . C G, 49.75 PASS DP=14;MQ=165.65;MQRankSum=0.156;ReadPosRankSum=1.090;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,11,0:0.786,0.000:14:1,6,0:2,5,0:35:85,0,32,393,107,501:255,0,74:3,0:4.9751e+01,1.3165e-03,3.5339e+01,3.9342e+02,1.4204e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,0,6,5:1,2,5,6 chr1 6501045 . G . PASS END=6501047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6501048 . G . PASS END=6501050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 6501051 . T . PASS END=6501051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6501052 . A . PASS END=6501063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 6501064 . A . PASS END=6501064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 6501065 . C . PASS END=6501081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 6501082 . G . PASS END=6501088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 6501089 . C . PASS END=6501089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 6501090 . C . PASS END=6501097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 6501098 . C . PASS END=6501098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 6501099 . C . PASS END=6501123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 6501124 . T . PASS END=6501124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 6501125 . G . PASS END=6501125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6504541 . A . PASS END=6504742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,106,1665:0,106,255:40,0 chr1 6505724 . G . PASS END=6505733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr1 6505734 . C . PASS END=6505734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 6505735 . G . PASS END=6505735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 6505736 . C . PASS END=6505736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:20,0 chr1 6505737 . T . PASS END=6505747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 6505748 . A . PASS END=6505748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr1 6505749 . C . PASS END=6505753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 6505754 . A . PASS END=6505754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6505755 . G . PASS END=6505758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6505759 . T . PASS END=6505759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 6505760 . A . PASS END=6505768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,821:0,66,255:22,0 chr1 6505769 . T . PASS END=6505769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 6505770 . G . PASS END=6505772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 6505773 . G . PASS END=6505799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:23,0 chr1 6505800 . C . PASS END=6505800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 6505801 . A . PASS END=6505802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6505803 . G . PASS END=6505809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:19,0 chr1 6505810 . A . PASS END=6505811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:30:22:0,30,450:0,66,255:12,0 chr1 6505812 . G . PASS END=6505813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:24:22:0,24,360:0,66,255:8,0 chr1 6505814 . C . PASS END=6505814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:30:22:0,30,450:0,66,255:10,0 chr1 6505815 . C . PASS END=6505822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:21:20:0,21,315:0,27,255:10,0 chr1 6505823 . C . PASS END=6505823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:18:18:0,18,270:0,54,255:6,0 chr1 6505824 . A . LowGQ END=6505824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,7:18:0:18:0,0,222:121,0,255:6,0 chr1 6505825 . C . PASS END=6505825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:18:18:0,18,270:0,37,255:6,0 chr1 6505826 . C . PASS END=6505826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:21:18:0,21,315:0,54,255:7,0 chr1 6505827 . A . LowGQ END=6505827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,7:18:0:18:0,0,222:98,0,255:7,0 chr1 6505828 . C . PASS END=6505830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,270:0,18,255:6,0 chr1 6505831 . C . PASS END=6505832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,45,255:9,0 chr1 6505833 . A . LowGQ END=6505833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,249:88,0,255:9,0 chr1 6505834 . C . PASS END=6505836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:27:15:0,27,405:0,28,255:9,0 chr1 6505837 . A . LowGQ END=6505838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,271:88,0,255:10,0 chr1 6505839 . C . PASS END=6505839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 6505840 . T . LowGQ END=6505843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,247:5,0,255:10,0 chr1 6505844 . C . PASS END=6505844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 6505845 . C . PASS END=6505845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:10,0 chr1 6505846 . C . PASS END=6505846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr1 6505847 . C . PASS END=6505847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 6505848 . G . LowGQ END=6505848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,294:30,0,255:10,0 chr1 6505849 . C . PASS END=6505849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:9,0 chr1 6505850 . C . PASS END=6505850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 6505851 . A . LowGQ END=6505851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,227:77,0,255:10,0 chr1 6505852 . C . PASS END=6505852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:10,0 chr1 6505853 . C . PASS END=6505854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6505855 . C . PASS END=6505856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 6505857 . G . LowGQ END=6505857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,249:55,0,255:9,0 chr1 6505858 . C . PASS END=6505861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,396:0,22,255:9,0 chr1 6505862 . C . PASS END=6505862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 6505863 . A . LowGQ END=6505865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,233:0,0,255:10,0 chr1 6505866 . C . PASS END=6505866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr1 6505867 . A . LowGQ END=6505867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,280:30,0,255:9,0 chr1 6505868 . C . PASS END=6505870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 6505871 . A . PASS END=6505872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,376:0,3,255:11,0 chr1 6505873 . C . PASS END=6505873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 6505874 . T . LowGQ END=6505876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,226:0,0,255:9,0 chr1 6505877 . C . PASS END=6505877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:9,0 chr1 6505878 . C . LowGQ END=6505878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,277:36,0,255:9,0 chr1 6505879 . C . PASS END=6505879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 6505880 . C . LowGQ END=6505882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:12:0,0,194:0,0,244:10,0 chr1 6505883 . C . PASS END=6505884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 6505885 . C . PASS END=6505886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 6505887 . A . PASS END=6505887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,490:0,17,255:15,0 chr1 6505888 . C . PASS END=6505889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 6505890 . T . PASS END=6505890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:14,0 chr1 6505891 . G . PASS END=6505893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 6505894 . T . PASS END=6505896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 6505897 . C . PASS END=6505898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:17,0 chr1 6505899 . A . PASS END=6505900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 6505901 . C . PASS END=6505902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6505903 . C . PASS END=6505903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 6505904 . C . PASS END=6505905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6505906 . A . PASS END=6505906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 6505907 . A . PASS END=6505907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6505908 . G . PASS END=6505908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 6505909 . C . PASS END=6505909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 6505910 . C . PASS END=6505913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 6505914 . T . PASS END=6505914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,559:0,10,255:16,0 chr1 6505915 . G . PASS END=6505915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6505916 . T . PASS END=6505916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 6505917 . A . PASS END=6505919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 6505920 . A . PASS END=6505921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:19,0 chr1 6505922 . C . PASS END=6505926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 6505927 . G . PASS END=6505927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 6505928 . C . PASS END=6505928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 6505929 . A . PASS END=6505930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 6505931 . C . PASS END=6505931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 6505932 . T . PASS END=6505933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 6505934 . A . PASS END=6505936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 6505937 . T . PASS END=6505938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:21:0,30,696:0,30,255:20,0 chr1 6505939 . T . PASS END=6505939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 6505940 . A . PASS END=6505940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 6505941 . C . PASS END=6505941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 6505942 . A . PASS END=6505942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 6505943 . T . PASS END=6505943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 6505944 . G . PASS END=6505944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 6505945 . C . PASS END=6505945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr1 6505946 . A . PASS END=6505946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6505947 . G . PASS END=6505947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:19,0 chr1 6505948 . A . PASS END=6505948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6505949 . C . PASS END=6505950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 6505951 . A . PASS END=6505952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6505953 . G . PASS END=6505953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,657:0,30,255:18,0 chr1 6505954 . A . PASS END=6505954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr1 6505955 . A . PASS END=6505955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6505956 . C . PASS END=6505957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,712:0,44,255:19,0 chr1 6505958 . A . PASS END=6505959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,663:0,63,255:21,0 chr1 6505960 . C . PASS END=6505960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 6505961 . T . PASS END=6505961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 6505962 . C . PASS END=6505962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 6505963 . C . PASS END=6505963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6505964 . G . PASS END=6505964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr1 6505965 . C . PASS END=6505966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6505967 . A . PASS END=6505968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:21:0,30,673:0,30,255:19,0 chr1 6505969 . G . PASS END=6505974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,720:0,47,255:19,0 chr1 6505975 . A . PASS END=6505975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,635:0,8,255:15,0 chr1 6505976 . C . PASS END=6505976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:16,0 chr1 6505977 . A . PASS END=6505977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,623:0,29,255:15,0 chr1 6505978 . G . PASS END=6505981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:16,0 chr1 6505982 . C . PASS END=6505983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,541:0,12,255:15,0 chr1 6505984 . C . PASS END=6505996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr1 6506365 . C . PASS END=6506371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,674:0,54,255:18,0 chr1 6506372 . C . PASS END=6506372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 6506373 . T . PASS END=6506385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:18:0,47,706:0,47,255:20,0 chr1 6506386 . G . PASS END=6506414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,703:0,63,255:25,0 chr1 6506415 . A . PASS END=6506415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 6506416 . A . PASS END=6506416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,873:0,45,255:21,0 chr1 6506417 . G . PASS END=6506420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 6506421 . C . PASS END=6506421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 6506422 . C . PASS END=6506422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 6506423 . A . PASS END=6506423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:21,0 chr1 6506424 . G . PASS END=6506428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr1 6506429 . A . PASS END=6506429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 6506430 . T . PASS END=6506432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6506433 . C . PASS END=6506433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,906:0,34,255:24,0 chr1 6506434 . T . PASS END=6506438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 6506439 . A . PASS END=6506439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:24,0 chr1 6506440 . G . PASS END=6506452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr1 6506453 . A . PASS END=6506453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,831:0,31,255:22,0 chr1 6506454 . G . PASS END=6506464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 6506465 . G . PASS END=6506465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 6506466 . G . PASS END=6506473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,825:0,69,255:23,0 chr1 6506474 . G . PASS END=6506474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:19,0 chr1 6506475 . C . PASS END=6506484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 6507015 . A . PASS END=6507018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 6507019 . A . PASS END=6507030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,806:0,62,255:26,0 chr1 6507031 . G . PASS END=6507041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:29,0 chr1 6507042 . T . PASS END=6507042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 6507043 . C . PASS END=6507045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:30,0 chr1 6507046 . C . PASS END=6507046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 6507047 . T . PASS END=6507048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 6507049 . T . PASS END=6507049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 6507050 . G . PASS END=6507086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1188:0,90,255:34,0 chr1 6507087 . A . PASS END=6507087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1226:0,69,255:32,0 chr1 6507088 . C . PASS END=6507174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,84,255:38,0 chr1 6507175 . C . PASS END=6507175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 6507176 . G . PASS END=6507176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 6507177 . T . PASS END=6507177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 6507178 . G . PASS END=6507181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:35,0 chr1 6507182 . C . PASS END=6507182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:31,0 chr1 6507183 . C . PASS END=6507183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 6507184 . C . PASS END=6507195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:33,0 chr1 6507196 . T . PASS END=6507196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:27:35:0,27,1068:0,27,255:31,0 chr1 6507197 . G . PASS END=6507207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1178:0,83,255:38,0 chr1 6507208 . C . PASS END=6507208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:29:41:0,29,1288:0,29,255:35,0 chr1 6507209 . G . PASS END=6507224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,111,1665:0,120,255:40,0 chr1 6507225 . C G, 50.00 PASS DP=39;MQ=238.81;MQRankSum=2.099;ReadPosRankSum=2.859;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:18,21,0:0.538,0.000:39:12,11,0:6,10,0:47:85,0,47,185,185,185:255,0,255:18,0:5.0000e+01,9.0343e-05,4.9668e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,9,12,9:7,11,12,9:6507225 chr1 6507226 . C . PASS END=6507226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 6507227 . G C, 50.00 PASS DP=38;MQ=239.40;MQRankSum=1.996;ReadPosRankSum=2.701;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:17,21,0:0.553,0.000:38:11,11,0:6,10,0:47:85,0,47,185,185,185:255,0,255:16,0:5.0000e+01,9.0343e-05,4.9668e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,8,12,9:7,10,12,9:6507225 chr1 6507228 . G . PASS END=6507236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1396:0,101,255:39,0 chr1 6507237 . C . PASS END=6507237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1266:0,40,255:33,0 chr1 6507238 . G . PASS END=6507257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1327:0,95,255:37,0 chr1 6507258 . C . PASS END=6507258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1294:0,37,255:30,0 chr1 6507259 . C . PASS END=6507265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:38:0,96,1440:0,114,255:34,0 chr1 6507266 . C . PASS END=6507267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1334:0,49,255:33,0 chr1 6507268 . C . PASS END=6507268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:42:0,96,1440:0,126,255:32,0 chr1 6507269 . T . PASS END=6507305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:34,0 chr1 6507306 . C . PASS END=6507316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 6507317 . C . PASS END=6507317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6507318 . T . PASS END=6507318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 6507319 . G . PASS END=6507323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:27,0 chr1 6507324 . G . PASS END=6507350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr1 6507351 . C . PASS END=6507353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr1 6507354 . C . PASS END=6507366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:21,0 chr1 6507367 . T . PASS END=6507367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 6507368 . T . PASS END=6507384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 6507385 . C . PASS END=6507385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 6507386 . C . PASS END=6507391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 6507392 . C . PASS END=6507392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 6507393 . G . PASS END=6507395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6507396 . T . PASS END=6507411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,599:0,40,255:19,0 chr1 6507412 . G . PASS END=6507412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 6507413 . G . PASS END=6507413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 6507414 . A . PASS END=6507414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:15,0 chr1 6507415 . G . PASS END=6507451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:18,0 chr1 6507452 . G . PASS END=6507452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 6507453 . C . PASS END=6507456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 6507457 . G . PASS END=6507458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 6507459 . G . PASS END=6507459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6507460 . C . PASS END=6507460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6507461 . G . PASS END=6507461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 6507462 . G . PASS END=6507467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6507468 . C . PASS END=6507501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,651:0,44,255:19,0 chr1 6507502 . T . PASS END=6507502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 6507503 . C . PASS END=6507508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6507509 . A . PASS END=6507509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 6507510 . C . PASS END=6507511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6507512 . T . PASS END=6507513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6507514 . A . PASS END=6507519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6508701 . C . PASS END=6508711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 6508712 . T C, 46.80 PASS DP=12;MQ=129.63;MQRankSum=-2.533;ReadPosRankSum=1.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,7,0:0.583,0.000:12:1,1,0:4,6,0:45:82,0,48,250,171,421:213,0,136:5,0:4.6800e+01,1.2917e-04,5.0521e+01,2.5034e+02,2.0555e+02,4.2411e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,3,4:3,2,5,2 chr1 6508713 . G . PASS END=6508715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 6508716 . G . PASS END=6508716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 6508717 . G . PASS END=6508717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6508718 . C . PASS END=6508724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 6508725 . G . PASS END=6508725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 6508726 . G . PASS END=6508728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 6508729 . T . PASS END=6508738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6508739 . G . PASS END=6508749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr1 6508750 . G . PASS END=6508769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 6508770 . A . PASS END=6508781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 6508782 . A . PASS END=6508782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:9,0 chr1 6508783 . C . PASS END=6508786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 6508787 . G . PASS END=6508834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 6508835 . A . PASS END=6508844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 6508845 . A . PASS END=6508853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:8:0,11,180:0,11,255:7,0 chr1 6508854 . A . PASS END=6508854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:9:8:0,9,135:0,24,255:3,0 chr1 6508855 . G . PASS END=6508871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:6,0 chr1 6508872 . C T, 24.64 PASS DP=6;MQ=149.09;MQRankSum=-0.720;ReadPosRankSum=0.720;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,2,0:0.333,0.000:6:2,0,0:2,2,0:25:59,0,50,71,143,214:59,0,137:3,0:2.4639e+01,1.4973e-02,5.3015e+01,7.1447e+01,1.7759e+02,2.1726e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,1,1:3,1,1,1 chr1 6508873 . G . PASS END=6508897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 6508898 . G . PASS END=6508909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,116:3,0 chr1 6508910 . T . PASS END=6508925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 6508926 . C . PASS END=6508931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 6508932 . G . PASS END=6508932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 6508933 . G . PASS END=6508953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 6508954 . C . PASS END=6508969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr1 6508970 . G . PASS END=6508989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 6508990 . G . LowGQ END=6509151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,16:3,0 chr1 6510504 . A . PASS END=6510530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,701:0,63,255:23,0 chr1 6511391 . A . PASS END=6511414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,143:6,0 chr1 6511415 . A . PASS END=6511430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:3:0,9,116:0,9,116:3,0 chr1 6511662 . G . PASS END=6511679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 6511680 . A . PASS END=6511680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 6511681 . T . PASS END=6511684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6511685 . G . PASS END=6511690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6511691 . G . PASS END=6511694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 6511695 . G . PASS END=6511725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1030:0,87,255:31,0 chr1 6511726 . A . PASS END=6511726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 6511727 . G . PASS END=6511736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 6511737 . A . PASS END=6511737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:27,0 chr1 6511738 . G . PASS END=6511760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,89,255:33,0 chr1 6511761 . A . PASS END=6511767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:29:0,69,1035:0,70,255:26,0 chr1 6511768 . T . PASS END=6511779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 6511780 . T . PASS END=6511780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:27,0 chr1 6511781 . C . PASS END=6511783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6511784 . A . PASS END=6511784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 6511785 . G . PASS END=6511794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 6511795 . A . PASS END=6511795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 6511796 . G . PASS END=6512052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1180:0,85,255:40,0 chr1 6512053 . C . PASS END=6512053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:30,0 chr1 6512054 . C . PASS END=6512061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:33:0,87,1242:0,91,255:30,0 chr1 6512062 . A . PASS END=6512062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:28,0 chr1 6512063 . T . PASS END=6512063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 6512064 . G . PASS END=6512064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1170:0,58,255:30,0 chr1 6512065 . A . PASS END=6512071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1082:0,82,255:33,0 chr1 6512072 . C . PASS END=6512072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 6512073 . C . PASS END=6512079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:33,0 chr1 6512080 . T . PASS END=6512080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:31,0 chr1 6512081 . C . PASS END=6512116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1125:0,80,255:33,0 chr1 6512117 . G . PASS END=6512117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 6512118 . C . PASS END=6512137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 6512138 . G . PASS END=6512140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6512141 . G . PASS END=6512141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr1 6512142 . G . PASS END=6512156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:25:0,62,914:0,62,255:26,0 chr1 6514494 . C . PASS END=6514497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 6514498 . C . PASS END=6514498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 6514499 . G . PASS END=6514505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 6514506 . A . PASS END=6514506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 6514507 . G . PASS END=6514514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 6514515 . T . PASS END=6514515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6514516 . G . PASS END=6514524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 6514525 . G . PASS END=6514525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 6514526 . C . PASS END=6514544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,675:0,44,255:19,0 chr1 6514545 . C . PASS END=6514551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 6514552 . A . PASS END=6514613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,623:0,41,255:19,0 chr1 6514614 . C . PASS END=6514614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 6514615 . A . PASS END=6514650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 6514651 . A . PASS END=6514652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 6514653 . A . PASS END=6514653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 6514654 . A . PASS END=6514659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 6514660 . A . PASS END=6514660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 6514661 . G . PASS END=6514679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 6514680 . G . PASS END=6514680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 6514681 . A . PASS END=6514686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 6514687 . A . PASS END=6514687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 6514688 . G . PASS END=6514733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:12,0 chr1 6514734 . T . PASS END=6514752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 6514753 . G . PASS END=6514788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:11:5:0,11,172:0,11,172:6,0 chr1 6514789 . G . PASS END=6514795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr1 6514796 . G . PASS END=6514814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:5,0 chr1 6514815 . A . LowGQ END=6514815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 6514816 . A . PASS END=6514823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,164:5,0 chr1 6514824 . A . LowGQ END=6514824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 6514825 . C . PASS END=6514826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr1 6514827 . C . LowGQ END=6514829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:0,0,118:3,0 chr1 6514830 . C . PASS END=6514852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr1 6514853 . T . PASS END=6514865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:4:0,9,135:0,12,147:3,0 chr1 6514866 . G . PASS END=6514874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,149:0,12,149:5,0 chr1 6514875 . A . LowGQ END=6514875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 6514876 . C . PASS END=6514953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr1 6514954 . A . PASS END=6514991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 6514992 . A . PASS END=6515000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 6515001 . T . PASS END=6515077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,62:3,0 chr1 6515078 . C . PASS END=6515078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 6515079 . C . LowGQ END=6515079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 6515080 . G . PASS END=6515102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 6515103 . G . LowGQ END=6515103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 6515104 . C . PASS END=6515148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 6515149 . G . PASS END=6515150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 6515151 . T . PASS END=6515183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 6515184 . C . PASS END=6515246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 6515247 . G . PASS END=6515248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6515249 . G . PASS END=6515251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6515252 . G . PASS END=6515272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6515273 . G . PASS END=6515294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 6515295 . A . PASS END=6515323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 6515324 . C . PASS END=6515349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 6515350 . T . PASS END=6515376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 6515377 . C . PASS END=6515421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,78:3,0 chr1 6515422 . T . PASS END=6515456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr1 6515457 . G . PASS END=6515458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 6515459 . G T, 0.33 DRAGENSnpHardQUAL DP=5;MQ=220.30;MQRankSum=-0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:3,1,0:1,0,0:11:24,0,50,36,138,174:24,0,140:4,0:3.2930e-01,1.1367e+01,6.4367e+01,4.7137e+01,1.8449e+02,1.8849e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,0,1:2,2,0,1 chr1 6515460 . C . PASS END=6515496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 6515497 . A . PASS END=6515499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 6515500 . G . PASS END=6515504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 6515505 . G . PASS END=6515523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6515524 . G . PASS END=6515524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6515525 . G . PASS END=6515582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 6515583 . A . PASS END=6515590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 6515591 . G . PASS END=6515591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6515592 . C . PASS END=6515596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr1 6515597 . C . PASS END=6515612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 6515613 . G . PASS END=6515623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 6515624 . C . PASS END=6515625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 6515626 . G . PASS END=6515636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 6515637 . C . PASS END=6515644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:13,0 chr1 6515645 . C . PASS END=6515672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,598:0,45,255:19,0 chr1 6515673 . C . PASS END=6515694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,892:0,68,255:26,0 chr1 6515695 . C . PASS END=6515701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 6515702 . C . PASS END=6515704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6515705 . C . PASS END=6515707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 6515708 . C . PASS END=6515708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:25,0 chr1 6515709 . A . PASS END=6515709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6515710 . T . PASS END=6515710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 6515711 . G . PASS END=6515714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 6515715 . G . PASS END=6515718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6515719 . A . PASS END=6515765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1135:0,80,255:31,0 chr1 6515766 . C . PASS END=6515786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:27:0,74,1092:0,74,255:26,0 chr1 6515787 . A . PASS END=6515796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 6515797 . G . PASS END=6515797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 6515798 . A . PASS END=6515806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 6515807 . C . PASS END=6515807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 6515808 . C . PASS END=6515812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 6515813 . G . PASS END=6515817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:23,0 chr1 6515818 . A . PASS END=6515818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 6515819 . G . PASS END=6515819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 6515820 . C . PASS END=6515828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:27:0,51,765:0,74,255:19,0 chr1 6515829 . C . PASS END=6515846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 6515847 . C . PASS END=6515847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:23,0 chr1 6515848 . T . PASS END=6515894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:24,0 chr1 6515895 . G . PASS END=6515898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6515899 . T . PASS END=6515905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 6515906 . C . PASS END=6515906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr1 6515907 . C . PASS END=6515912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:23,0 chr1 6515913 . T . PASS END=6515913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 6515914 . T . PASS END=6515918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6515919 . A . PASS END=6515919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 6515920 . A . PASS END=6515920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6515921 . C . PASS END=6515921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 6515922 . G . PASS END=6515925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 6515926 . T . PASS END=6515929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,836:0,53,255:19,0 chr1 6515930 . G . PASS END=6515930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 6515931 . G . PASS END=6515935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6515936 . G . PASS END=6515940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 6515941 . C . PASS END=6515941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 6515942 . C . PASS END=6515942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6515943 . C . PASS END=6515943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 6515944 . C . PASS END=6515946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6515947 . A . PASS END=6515947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 6515948 . A . PASS END=6515949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6515950 . A . PASS END=6515950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6515951 . A . PASS END=6515954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6515955 . G . PASS END=6515959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 6515960 . G . PASS END=6515962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6515963 . A . PASS END=6515963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6515964 . A . PASS END=6515968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6515969 . A . PASS END=6515971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:20,0 chr1 6515972 . G . PASS END=6515972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,759:0,14,255:19,0 chr1 6515973 . G . PASS END=6515979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 6515980 . A . PASS END=6515981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6515982 . G . PASS END=6515982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6515983 . A . PASS END=6515998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,47,255:19,0 chr1 6515999 . A . PASS END=6516000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 6516001 . A . PASS END=6516019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:17,0 chr1 6516020 . G . PASS END=6516020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 6516021 . G . PASS END=6516066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 6516067 . A . PASS END=6516067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,2 chr1 6516068 . G . LowGQ END=6516070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,659:6,0,255:18,2 chr1 6516071 . G . PASS END=6516071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr1 6516072 . C . PASS END=6516079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 6516080 . G . PASS END=6516093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 6516094 . C . PASS END=6516094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 6516095 . G . PASS END=6516115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:24,0 chr1 6516116 . T . PASS END=6516116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 6516117 . C . PASS END=6516125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 6516126 . G . PASS END=6516126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 6516127 . A . PASS END=6516131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6516132 . C . PASS END=6516133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:25:0,47,900:0,47,255:24,0 chr1 6516134 . C . PASS END=6516141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,990:0,68,255:25,0 chr1 6516142 . A . PASS END=6516142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:22,0 chr1 6516143 . C . PASS END=6516157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,60,255:23,0 chr1 6516158 . G . PASS END=6516158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 6516159 . T . PASS END=6516160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6516161 . T . PASS END=6516161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:22,0 chr1 6516162 . G . PASS END=6516164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6516165 . A . PASS END=6516165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:23,0 chr1 6516166 . T . PASS END=6516176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 6516177 . A . PASS END=6516177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 6516178 . G . PASS END=6516178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6516179 . C . PASS END=6516179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 6516180 . A . PASS END=6516188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6516189 . A . PASS END=6516189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 6516190 . T . PASS END=6516191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 6516192 . T . PASS END=6516192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 6516193 . G . PASS END=6516193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:21,0 chr1 6516194 . C . PASS END=6516194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 6516195 . C . PASS END=6516195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 6516196 . G . PASS END=6516196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:19,0 chr1 6516197 . C . PASS END=6516197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 6516198 . T . PASS END=6516199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:19,0 chr1 6516200 . C . PASS END=6516216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 6516217 . C . PASS END=6516217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 6516218 . C . PASS END=6516228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 6516229 . A . PASS END=6516229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 6516230 . G . PASS END=6516238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 6516239 . A . PASS END=6516239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 6516240 . G . PASS END=6516243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6516244 . T . PASS END=6516253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr1 6516254 . C . PASS END=6516257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6517244 . G . PASS END=6517244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,994:0,24,255:25,2 chr1 6517245 . A . PASS END=6517245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,929:0,32,255:27,0 chr1 6517246 . G . PASS END=6517246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6517247 . G . PASS END=6517247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 6517248 . A . PASS END=6517324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:30:0,87,1235:0,90,255:40,0 chr1 6517326 . G . PASS END=6517334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,149,255:40,0 chr1 6517421 . G . PASS END=6517432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:42:0,94,1567:0,94,255:38,0 chr1 6520057 . A . PASS END=6520060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6520061 . A . PASS END=6520061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6520062 . A . PASS END=6520065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6520066 . G . PASS END=6520066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 6520067 . A . PASS END=6520072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:21,0 chr1 6520073 . G . PASS END=6520074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 6520075 . C . PASS END=6520075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6520076 . A . PASS END=6520076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 6520077 . G . PASS END=6520077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6520078 . A . PASS END=6520078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,696:0,11,255:20,0 chr1 6520079 . A . PASS END=6520081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6520082 . A . PASS END=6520082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 6520083 . G . PASS END=6520086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6520087 . G . PASS END=6520087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 6520088 . A . PASS END=6520090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 6520091 . T . PASS END=6520091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 6520092 . G . PASS END=6520099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6520100 . A . PASS END=6520100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 6520101 . G . PASS END=6520113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6520114 . G . PASS END=6520114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 6520115 . A . PASS END=6520116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6520117 . A . PASS END=6520154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,637:0,44,255:19,0 chr1 6520155 . G . PASS END=6520155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr1 6520156 . C . PASS END=6520158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 6520159 . T . PASS END=6520159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 6520160 . G . PASS END=6520160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6520161 . G . PASS END=6520161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 6520162 . C . PASS END=6520168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 6520169 . A . PASS END=6520169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6520170 . G . PASS END=6520173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 6520174 . A . PASS END=6520174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 6520175 . T . PASS END=6520181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6520182 . G . PASS END=6520191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 6520192 . A . PASS END=6520192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,441:0,3,255:9,0 chr1 6520193 . T . PASS END=6520197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 6520198 . A . PASS END=6520206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:11:0,18,270:0,20,255:6,0 chr1 6521240 . A . PASS END=6521245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,120,1800:0,131,255:40,0 chr1 6521494 . T . PASS END=6521500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 6521501 . C . PASS END=6521511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 6521512 . G . PASS END=6521512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 6521513 . C . PASS END=6521538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:13,0 chr1 6521539 . G . PASS END=6521551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,553:0,48,255:16,0 chr1 6521552 . C . PASS END=6521552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 6521553 . G . PASS END=6521568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 6521569 . A . PASS END=6521570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,423:0,31,255:15,0 chr1 6521571 . C . PASS END=6521585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 6521586 . C . PASS END=6521586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 6521587 . G . PASS END=6521592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 6521593 . C . PASS END=6521593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 6521594 . T . PASS END=6521594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 6521595 . G . PASS END=6521616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:17,0 chr1 6521617 . C . PASS END=6521617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 6521618 . T . PASS END=6521624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,657:0,41,255:18,0 chr1 6521625 . G . PASS END=6521625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 6521626 . C . PASS END=6521626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 6521627 . T . PASS END=6521627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr1 6521628 . G . PASS END=6521677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,590:0,40,255:18,0 chr1 6521678 . C . PASS END=6521698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,466:0,39,255:13,0 chr1 6521699 . A . PASS END=6521699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 6521700 . A . PASS END=6521700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,425:0,25,255:13,0 chr1 6521701 . C . PASS END=6521701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 6521702 . T . PASS END=6521702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6521703 . C . PASS END=6521703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6521704 . C . PASS END=6521704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:14,0 chr1 6521705 . T . PASS END=6521705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6521706 . T . PASS END=6521706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 6521707 . C . PASS END=6521707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6521708 . C . PASS END=6521708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr1 6521709 . A . PASS END=6521713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:18,0 chr1 6521714 . C . PASS END=6521714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 6521715 . G . PASS END=6521727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:19,0 chr1 6521728 . G . PASS END=6521728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:16,0 chr1 6521729 . T . PASS END=6521752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 6521753 . C . PASS END=6521754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 6521755 . C . PASS END=6521794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,654:0,41,255:19,0 chr1 6521795 . G . PASS END=6521796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 6521797 . C . PASS END=6521800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 6521801 . A . PASS END=6521801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:17,0 chr1 6521802 . G . PASS END=6521816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 6521817 . C . PASS END=6521821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 6521822 . C . PASS END=6521822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 6522054 . C . PASS END=6522060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 6522061 . T . PASS END=6522061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 6522062 . C . PASS END=6522062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 6522063 . T . PASS END=6522073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,566:0,48,255:18,0 chr1 6522074 . T . PASS END=6522074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 6522075 . G . PASS END=6522077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:46:18:0,46,629:0,46,255:19,0 chr1 6522078 . C . PASS END=6522081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6522082 . G . PASS END=6522085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 6522086 . C . PASS END=6522087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6522088 . T . PASS END=6522090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 6522091 . C . PASS END=6522094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 6522095 . T . PASS END=6522095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 6522096 . G . PASS END=6522097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 6522098 . G . PASS END=6522100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 6522101 . C . PASS END=6522102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 6522103 . G . PASS END=6522103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 6522104 . A . PASS END=6522109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 6522110 . T . PASS END=6522111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 6522112 . C . PASS END=6522112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 6522113 . T . PASS END=6522113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 6522114 . G . PASS END=6522115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 6522116 . G . PASS END=6522116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 6522117 . T . PASS END=6522118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:23,0 chr1 6522119 . T . PASS END=6522122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 6522123 . G . PASS END=6522123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 6522124 . G . PASS END=6522132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,945:0,62,255:26,0 chr1 6522133 . G . PASS END=6522147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:31,0 chr1 6522148 . C . PASS END=6522148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 6522149 . A . PASS END=6522157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 6522158 . A . PASS END=6522158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 6522159 . C . PASS END=6522161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 6522162 . T . PASS END=6522171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,83,255:26,0 chr1 6522172 . C . PASS END=6522173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6522174 . C . PASS END=6522174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 6522175 . A . PASS END=6522175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6522176 . C . PASS END=6522177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,953:0,65,255:27,0 chr1 6522178 . G . PASS END=6522185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 6522186 . G . PASS END=6522189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 6522190 . T . PASS END=6522195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6522196 . A . PASS END=6522213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 6522214 . C . PASS END=6522222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:21:0,48,720:0,63,255:19,0 chr1 6522223 . C . PASS END=6522223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:16,0 chr1 6522224 . A . PASS END=6522234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,645:0,54,255:18,0 chr1 6522689 . C . PASS END=6522705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1319:0,97,255:37,0 chr1 6522706 . C . PASS END=6522706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 6522707 . C . PASS END=6522707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 6522708 . T . PASS END=6522709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 6522710 . C . PASS END=6522716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1390:0,81,255:35,0 chr1 6522717 . G . PASS END=6522717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:33,0 chr1 6522718 . C . PASS END=6522718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1296:0,37,255:32,0 chr1 6522719 . T . PASS END=6522723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:32,0 chr1 6522724 . C . PASS END=6522726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1218:0,86,255:32,0 chr1 6522923 . C . PASS END=6522924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 6522925 . G . PASS END=6522925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 6522926 . T . PASS END=6522958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1088:0,85,255:35,0 chr1 6522959 . A . PASS END=6522959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 6522960 . T . PASS END=6523207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:36:0,108,1365:0,108,255:40,0 chr1 6524431 . T . PASS END=6524463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,110,1527:0,110,255:40,0 chr1 6524464 . T . PASS END=6524500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,102,1620:0,102,255:40,0 chr1 6524501 . T C, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.528;ReadPosRankSum=1.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,22,0:0.524,0.000:42:9,14,0:11,8,0:48:85,0,50,786,668,1454:255,0,255:18,0:5.0000e+01,6.6527e-05,5.2762e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,10,12:11,9,12,10 chr1 6524502 . C . PASS END=6524513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,101,1388:0,101,255:35,0 chr1 6524612 . A . PASS END=6524612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 6524613 . G . PASS END=6524614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 6524615 . G . PASS END=6524615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 6524616 . T . PASS END=6524625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 6524626 . T . PASS END=6524626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 6524627 . G . PASS END=6524631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6524632 . T . PASS END=6524639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6524640 . C . PASS END=6524641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6524642 . C . PASS END=6524645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,986:0,45,255:24,0 chr1 6524646 . G . PASS END=6524664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1111:0,90,255:36,0 chr1 6524665 . T . PASS END=6524665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:34,0 chr1 6524666 . A . PASS END=6524779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1209:0,86,255:40,0 chr1 6525148 . C . PASS END=6525160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr1 6525161 . G . PASS END=6525184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:30,0 chr1 6525185 . A . PASS END=6525193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 6525194 . G . PASS END=6525194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr1 6525195 . T . PASS END=6525196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 6525197 . C . PASS END=6525223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 6525224 . A . PASS END=6525224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 6525225 . C . PASS END=6525238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:30,0 chr1 6525239 . G . PASS END=6525239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 6525240 . G . PASS END=6525251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1147:0,90,255:30,0 chr1 6525252 . G . PASS END=6525252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 6525253 . G . PASS END=6525255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 6525256 . C . PASS END=6525257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1100:0,74,255:26,0 chr1 6525258 . G . PASS END=6525265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 6525266 . G . PASS END=6525267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:25,0 chr1 6525268 . C . PASS END=6525268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,898:0,26,255:21,0 chr1 6525269 . C . PASS END=6525282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,917:0,64,255:23,0 chr1 6525500 . C . PASS END=6525507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr1 6525508 . C . PASS END=6525508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 6525509 . A . PASS END=6525509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6525510 . G . PASS END=6525511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 6525512 . C . PASS END=6525512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 6525513 . T . PASS END=6525513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 6525514 . C . PASS END=6525532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:33,0 chr1 6525533 . T . PASS END=6525533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:32,0 chr1 6525534 . C . PASS END=6525555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:33:0,85,1156:0,85,255:33,0 chr1 6525556 . C . PASS END=6525556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:29,0 chr1 6525557 . A . PASS END=6525577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:32:0,89,1263:0,89,255:33,0 chr1 6525578 . T . PASS END=6525578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:29,0 chr1 6525579 . G . PASS END=6525584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:30,0 chr1 6525585 . C . PASS END=6525594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:73:30:0,73,928:0,73,255:26,0 chr1 6525595 . G . PASS END=6525595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:24,0 chr1 6525596 . C . PASS END=6525603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,841:0,61,255:25,0 chr1 6525604 . A . PASS END=6525604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:19,0 chr1 6525605 . G . PASS END=6525605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 6525606 . C . PASS END=6525613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:24:0,42,720:0,42,255:18,0 chr1 6525614 . G . PASS END=6525614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,623:0,16,255:16,0 chr1 6525615 . G . PASS END=6525617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:16,0 chr1 6525618 . C . PASS END=6525618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 6525619 . G . PASS END=6525619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 6525620 . C . PASS END=6525620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:13,0 chr1 6526129 . C . PASS END=6526133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6526134 . C . PASS END=6526136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 6526137 . C . PASS END=6526145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 6526146 . A . PASS END=6526146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 6526147 . G . PASS END=6526153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 6526154 . G . PASS END=6526159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:26,0 chr1 6526160 . T . PASS END=6526162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:45:31:0,45,675:0,82,255:18,0 chr1 6526163 . T . PASS END=6526167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:36:33:0,36,540:0,99,255:13,0 chr1 6526218 . T . PASS END=6526218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:48:31:0,48,720:0,93,255:16,0 chr1 6526249 . G . PASS END=6526249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:40:36:0,40,1188:0,40,255:28,1 chr1 6526269 . A . PASS END=6526269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 6526276 . C . PASS END=6526276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 6526290 . G . PASS END=6526291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1349:0,95,255:38,0 chr1 6526334 . G . PASS END=6526334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 6526437 . T . PASS END=6526437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 6526536 . C . PASS END=6526536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 6527050 . C . PASS END=6527050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 6527068 . A . PASS END=6527068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 6527260 . G . PASS END=6527260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 6527319 . G . PASS END=6527319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6527338 . G . PASS END=6527338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:16,0 chr1 6527387 . C . PASS END=6527387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 6527431 . C . PASS END=6527431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 6527464 . C . PASS END=6527464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 6527555 . G . PASS END=6527555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 6527623 . T . PASS END=6527629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr1 6527630 . T . PASS END=6527632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,810:0,59,255:18,0 chr1 6527879 . A . PASS END=6527879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 6527881 . T . PASS END=6527885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,698:0,46,255:21,0 chr1 6527886 . A . PASS END=6527888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6527889 . C . PASS END=6527889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 6527890 . A . PASS END=6527895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,732:0,66,255:23,0 chr1 6527896 . C . PASS END=6527896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 6527897 . G . PASS END=6527900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:24,0 chr1 6527901 . A . PASS END=6527901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 6527902 . G . PASS END=6527927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,856:0,72,255:26,0 chr1 6527928 . G . PASS END=6527928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 6527929 . G . PASS END=6527980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 6527981 . G . PASS END=6528000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr1 6528001 . A . PASS END=6528037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,64,255:26,0 chr1 6528038 . T . PASS END=6528038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 6528039 . G . PASS END=6528052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 6528053 . T . PASS END=6528053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 6528054 . C . PASS END=6528062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 6528063 . G . PASS END=6528063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6528064 . G . PASS END=6528064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6528065 . C . PASS END=6528083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 6528084 . C . PASS END=6528085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 6528086 . C . PASS END=6528088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 6528089 . C . PASS END=6528089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 6528090 . C . PASS END=6528090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 6528091 . A . PASS END=6528114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:12,0 chr1 6528115 . C . PASS END=6528115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 6528116 . C . PASS END=6528121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 6528122 . G . PASS END=6528122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 6528123 . G . PASS END=6528128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr1 6528129 . C . PASS END=6528129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 6528130 . T . PASS END=6528146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 6528147 . G . PASS END=6528147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 6528148 . A . PASS END=6528154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 6528155 . A . PASS END=6528155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 6528156 . T . PASS END=6528156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6528157 . A . PASS END=6528157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,368:0,3,255:12,0 chr1 6528158 . C . PASS END=6528169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 6528170 . A . PASS END=6528170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 6528171 . C . PASS END=6528171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 6528172 . A . LowGQ END=6528172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 6528173 . G . PASS END=6528173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 6528174 . C . PASS END=6528175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 6528176 . A . PASS END=6528176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:10,0 chr1 6528177 . G . PASS END=6528200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 6528201 . T . PASS END=6528222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,271:0,21,255:8,0 chr1 6528223 . G . PASS END=6528223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 6528224 . G . PASS END=6528240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 6528241 . C . PASS END=6528241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 6528242 . A . PASS END=6528252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr1 6528253 . G . PASS END=6528259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 6528260 . T . PASS END=6528268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,249:6,0 chr1 6528269 . G . PASS END=6528287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:8,0 chr1 6528288 . G . PASS END=6528288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 6528289 . G . PASS END=6528293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,333:0,27,255:9,0 chr1 6528294 . T . PASS END=6528294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 6528295 . C . PASS END=6528343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 6528344 . G . PASS END=6528353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 6528354 . G . PASS END=6528354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 6528355 . T . PASS END=6528416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 6528417 . A . PASS END=6528425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 6528426 . G . PASS END=6528429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 6528430 . G . PASS END=6528430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 6528431 . A . PASS END=6528448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:13,0 chr1 6528449 . T . PASS END=6528467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 6528468 . C T, 49.89 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=0.041;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:8,6,0:2,3,0:48:85,0,50,322,358,679:255,0,255:10,0:4.9889e+01,6.6269e-05,5.3000e+01,3.2187e+02,3.9237e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,4,5:5,5,7,2 chr1 6528469 . G . PASS END=6528474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 6528475 . C . PASS END=6528485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 6528486 . G . PASS END=6528495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,837:0,63,255:23,0 chr1 6528496 . A . PASS END=6528496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:22,0 chr1 6528497 . C . PASS END=6528505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 6528506 . G . PASS END=6528513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 6528514 . T . PASS END=6528514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 6528515 . G . PASS END=6528515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6528516 . A . PASS END=6528516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 6528517 . G . PASS END=6528536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:22:0,61,868:0,61,255:25,0 chr1 6528537 . T . PASS END=6528537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 6528538 . C . PASS END=6528551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,837:0,66,255:22,0 chr1 6528552 . A . PASS END=6528553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6528554 . C . PASS END=6528554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 6528555 . T . PASS END=6528584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 6528585 . A . PASS END=6528588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 6528589 . C T, 49.61 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=2.077;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:9,7,0:3,3,0:48:84,0,50,354,429,783:255,0,255:9,0:4.9606e+01,6.9375e-05,5.3000e+01,3.5422e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,5,5:5,7,4,6 chr1 6528590 . G . PASS END=6528622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr1 6528623 . G . PASS END=6528626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 6528627 . C . PASS END=6528641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 6528642 . A . PASS END=6528642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 6528643 . G . PASS END=6528646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr1 6529098 . G . PASS END=6529098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 6529102 . C . PASS END=6529135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,116,1651:0,116,255:40,0 chr1 6529136 . G . PASS END=6529172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:47:0,90,1350:0,134,255:40,0 chr1 6529173 . G . PASS END=6529178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:69:50:0,69,1035:0,150,255:25,0 chr1 6529179 . G . PASS END=6529181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:48:50:0,48,720:0,117,255:16,0 chr1 6529182 . TTCC T, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=1.765;FractionInformativeReads=0.911;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,22,0:0.537,0.000:41:11,9,0:8,13,0:47:62,0,46,162,162,162:255,0,255:12,32:5.0000e+01,9.5779e-05,4.9190e+01,1.8477e+02,1.9677e+02,1.8778e+02:0.00,12.00,15.01,34.77,46.77,37.78:8,11,7,15:8,11,10,12:6529182 chr1 6529183 . T . LowGQ END=6529186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:25,32:57:0:45:0,0,0:255,0,255:34,32 chr1 6529187 . C . PASS END=6529187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:97:44:0,97,1521:0,97,255:34,1 chr1 6529188 . C T, 49.19 PASS DP=43;MQ=250.00;MQRankSum=5.564;ReadPosRankSum=-1.480;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:24,19,0:0.442,0.000:43:11,11,0:13,8,0:47:84,0,47,184,184,184:255,0,255:21,1:4.9190e+01,9.5779e-05,5.0000e+01,1.8396e+02,2.1873e+02,1.8697e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,16,8,11:11,13,8,11:6529182 chr1 6529189 . T . PASS END=6529233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:42:0,97,1620:0,97,255:40,0 chr1 6529234 . T . PASS END=6529301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1260:0,87,255:40,0 chr1 6529395 . C . PASS END=6529405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 6529406 . A . PASS END=6529437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:32:0,82,1149:0,82,255:36,0 chr1 6529438 . T . PASS END=6529438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 6529439 . G . PASS END=6529442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1373:0,108,255:36,0 chr1 6529443 . A G, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,19,0:0,17,0:105:193,108,0,1396,108,1396:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,17:0,0,20,16 chr1 6529444 . C . PASS END=6529480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1363:0,95,255:36,0 chr1 6529481 . A . PASS END=6529510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1194:0,83,255:31,0 chr1 6529604 . C . PASS END=6529710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1217:0,86,255:40,0 chr1 6529711 . G . PASS END=6529734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1155:0,80,255:35,0 chr1 6529735 . A . PASS END=6529736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:25,0 chr1 6530296 . C . PASS END=6530363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,800:0,66,255:25,0 chr1 6530364 . A . PASS END=6530365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:33:24:0,33,845:0,33,255:23,0 chr1 6530366 . G . PASS END=6530388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 6530389 . G . PASS END=6530397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 6530398 . C . PASS END=6530415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 6530417 . T . PASS END=6530418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 6530423 . C . PASS END=6530424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 6530566 . C . PASS END=6530625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,613:0,51,255:17,0 chr1 6530626 . G . PASS END=6530634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 6530635 . C . PASS END=6530637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 6530638 . C . PASS END=6530661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 6530662 . G . PASS END=6530662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 6530663 . C . PASS END=6530668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 6530669 . T . PASS END=6530676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:10:0,24,360:0,30,255:9,0 chr1 6530677 . G . PASS END=6530678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 6530679 . G . PASS END=6530703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr1 6530795 . C . PASS END=6530807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,878:0,65,255:26,0 chr1 6530808 . G . PASS END=6530922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1039:0,81,255:40,0 chr1 6530923 . A . PASS END=6530928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:29,0 chr1 6530929 . G . PASS END=6530931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:26,0 chr1 6530932 . G . PASS END=6530932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:57:35:0,57,855:0,105,255:19,0 chr1 6530933 . C . PASS END=6530936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:34:0,60,900:0,102,255:20,0 chr1 6530937 . T . PASS END=6530944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:48:31:0,48,720:0,54,255:19,0 chr1 6531050 . C . PASS END=6531050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 6531051 . G . PASS END=6531051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr1 6531052 . T . PASS END=6531053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 6531054 . A . PASS END=6531054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1117:0,65,255:29,0 chr1 6531055 . T . PASS END=6531057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:30,0 chr1 6531058 . A . PASS END=6531059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 6531060 . G . PASS END=6531077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1188:0,85,255:36,0 chr1 6531078 . T . PASS END=6531078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:33,0 chr1 6531079 . C . PASS END=6531086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 6531087 . A . PASS END=6531123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:32:0,89,1271:0,89,255:34,0 chr1 6531124 . T C, 48.76 PASS DP=32;MQ=248.77;MQRankSum=4.122;ReadPosRankSum=2.070;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:10,10,0:8,4,0:47:84,0,50,443,599,1042:255,0,255:16,0:4.8761e+01,7.9471e-05,5.3000e+01,4.4251e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,9,5:11,7,7,7 chr1 6531125 . G . PASS END=6531125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 6531126 . C . PASS END=6531138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr1 6531139 . A . PASS END=6531139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 6531140 . G . PASS END=6531140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 6531141 . G . PASS END=6531141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 6531142 . G . PASS END=6531142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 6531143 . C . PASS END=6531143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 6531144 . T . PASS END=6531151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,799:0,66,255:22,0 chr1 6531152 . C . PASS END=6531153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 6531154 . A . PASS END=6531154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,759:0,22,255:18,0 chr1 6531155 . G . PASS END=6531160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 6531548 . C . PASS END=6531551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 6531552 . T . PASS END=6531561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr1 6531562 . T . PASS END=6531562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 6531563 . G . PASS END=6531564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 6531565 . G . PASS END=6531566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 6531567 . A . PASS END=6531570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:16,0 chr1 6531571 . C . PASS END=6531571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 6531572 . C . PASS END=6531574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 6531575 . G . PASS END=6531575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 6531576 . G . PASS END=6531581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:19,0 chr1 6531582 . A . PASS END=6531588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 6531589 . C T, 26.16 PASS DP=20;MQ=250.00;MQRankSum=3.230;ReadPosRankSum=1.658;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,5,0:0.250,0.000:20:10,2,0:5,3,0:26:61,0,50,171,508,678:162,0,255:15,0:2.6165e+01,1.0538e-02,5.3011e+01,1.7086e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,5,0:8,7,2,3 chr1 6531590 . T . PASS END=6531594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 6531595 . T . PASS END=6531595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 6531596 . G . PASS END=6531598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr1 6531599 . C . PASS END=6531599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 6531600 . C . PASS END=6531605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6531606 . T . PASS END=6531606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 6531607 . T . PASS END=6531611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 6531612 . A . PASS END=6531612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 6531613 . G . PASS END=6531618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 6531619 . G . PASS END=6531619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:21,0 chr1 6531620 . C . PASS END=6531628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6531629 . G . PASS END=6531629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 6531630 . C . PASS END=6531646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 6531647 . G . PASS END=6531647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 6531648 . T . PASS END=6531649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6531650 . C T, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.618;ReadPosRankSum=2.126;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,14,0:0.667,0.000:21:2,9,0:5,5,0:46:85,0,45,485,250,735:255,0,244:7,0:5.0000e+01,1.1494e-04,4.7837e+01,4.5000e+02,2.8513e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,7,7:4,3,6,8 chr1 6531651 . A . PASS END=6531651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 6531652 . G . PASS END=6531656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,829:0,66,255:22,0 chr1 6531657 . G . PASS END=6531687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:21,0 chr1 6531688 . C . PASS END=6531697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 6531813 . C . PASS END=6531813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 6531818 . C . PASS END=6531819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:22:0,48,810:0,48,255:21,0 chr1 6531820 . C . PASS END=6531865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,868:0,69,255:25,0 chr1 6531866 . C . PASS END=6531868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 6531871 . G . PASS END=6531871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 6532579 . C . PASS END=6532579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 6532586 . C . PASS END=6532682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,92,255:40,0 chr1 6532684 . T . PASS END=6532684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 6533046 . C . PASS END=6533051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 6533052 . C . PASS END=6533059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 6533060 . T . PASS END=6533060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 6533061 . G . PASS END=6533062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 6533063 . G . PASS END=6533063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6533064 . C . PASS END=6533064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 6533065 . T . PASS END=6533065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 6533066 . C . PASS END=6533067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 6533068 . C . PASS END=6533068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 6533069 . G . PASS END=6533069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 6533070 . C . PASS END=6533070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 6533071 . C . PASS END=6533073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr1 6533074 . C . PASS END=6533076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 6533077 . T . PASS END=6533077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,594:0,10,255:17,0 chr1 6533078 . C . PASS END=6533079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 6533080 . T . PASS END=6533084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:20,0 chr1 6533085 . C . PASS END=6533096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:24,0 chr1 6533097 . A . PASS END=6533097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 6533098 . T . PASS END=6533106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,954:0,75,255:26,0 chr1 6533107 . T . PASS END=6533115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6533116 . T . PASS END=6533118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 6533119 . T . PASS END=6533122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6533123 . A . PASS END=6533167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 6533168 . G . PASS END=6533174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 6533175 . C . PASS END=6533197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 6533198 . G . PASS END=6533198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 6533199 . C . PASS END=6533201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6533202 . C . PASS END=6533202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 6533203 . T . PASS END=6533206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6533207 . C . PASS END=6533215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,782:0,50,255:19,0 chr1 6533216 . G . PASS END=6533216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:17,0 chr1 6533217 . C . PASS END=6533234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 6533243 . A . PASS END=6533243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6533298 . T . PASS END=6533298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 6533311 . C . PASS END=6533321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,652:0,41,255:18,0 chr1 6533322 . C . PASS END=6533355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 6533356 . G . PASS END=6533372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 6533373 . G . PASS END=6533373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 6533374 . G . PASS END=6533392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:24,0 chr1 6533393 . G C, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,953,75,953:255,75,0:0,0:1.2224e+02,7.2237e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,13:0,0,13,12 chr1 6533394 . T . PASS END=6533430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 6533431 . G . PASS END=6533475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,837:0,65,255:25,0 chr1 6533476 . C . PASS END=6533476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 6533477 . A . PASS END=6533500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 6533501 . C . PASS END=6533514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:19:0,57,670:0,57,255:19,0 chr1 6534073 . C . PASS END=6534074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 6534075 . A . PASS END=6534075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 6534076 . G . LowGQ END=6534076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,439:12,0,255:14,0 chr1 6534077 . A . PASS END=6534077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:16,0 chr1 6534078 . T . PASS END=6534078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 6534079 . G . PASS END=6534079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,579:0,10,255:17,0 chr1 6534080 . T . PASS END=6534080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6534081 . C . PASS END=6534081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,570:0,18,255:18,0 chr1 6534082 . C . PASS END=6534083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr1 6534084 . G . LowGQ END=6534084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,465:10,0,255:15,0 chr1 6534085 . G . PASS END=6534086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 6534087 . T . PASS END=6534087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,619:0,30,255:19,0 chr1 6534088 . C . PASS END=6534088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 6534089 . T . PASS END=6534090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 6534091 . C . PASS END=6534091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 6534092 . C . PASS END=6534092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 6534093 . G . PASS END=6534093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 6534094 . G . PASS END=6534094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 6534095 . C . PASS END=6534095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 6534096 . G . PASS END=6534097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 6534098 . C . PASS END=6534099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,739:0,42,255:23,0 chr1 6534100 . C . PASS END=6534100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,836:0,28,255:21,0 chr1 6534101 . T . PASS END=6534101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 6534102 . G . PASS END=6534102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:22,0 chr1 6534103 . G . PASS END=6534104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr1 6534105 . C . PASS END=6534106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:24,0 chr1 6534107 . T . PASS END=6534114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,915:0,64,255:25,0 chr1 6534115 . C . PASS END=6534115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6534116 . T . PASS END=6534116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:27,0 chr1 6534117 . C . PASS END=6534117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 6534118 . C . PASS END=6534119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6534120 . G . PASS END=6534120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 6534121 . G . PASS END=6534122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6534123 . C . PASS END=6534123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,969:0,40,255:26,0 chr1 6534124 . G . PASS END=6534136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1062:0,80,255:32,0 chr1 6534137 . C . PASS END=6534137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 6534138 . C . PASS END=6534141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1188:0,96,255:32,0 chr1 6534142 . T . PASS END=6534142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:30,0 chr1 6534143 . G . PASS END=6534143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 6534144 . G . PASS END=6534144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:30,0 chr1 6534145 . C . PASS END=6534152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 6534153 . T . PASS END=6534154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:29,0 chr1 6534155 . G . PASS END=6534159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr1 6534160 . A . PASS END=6534161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,922:0,76,255:29,0 chr1 6534162 . T . PASS END=6534164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 6534165 . G . PASS END=6534184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,65,255:27,0 chr1 6534185 . C . PASS END=6534224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 6534226 . T . PASS END=6534226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 6534235 . G . PASS END=6534235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 6534499 . G . PASS END=6534499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1296:0,105,255:35,0 chr1 6534511 . C . PASS END=6534647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:36:0,81,1165:0,81,255:40,0 chr1 6534862 . T . PASS END=6534892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1349:0,95,255:38,0 chr1 6535101 . C . PASS END=6535101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 6535107 . C . PASS END=6535198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,102,1800:0,102,255:40,0 chr1 6535201 . G . PASS END=6535201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 6535522 . A . PASS END=6535582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:41:0,88,1467:0,88,255:40,0 chr1 6535991 . C . PASS END=6536011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,123,255:40,2 chr1 6536012 . T . PASS END=6536012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,5:64:73:64:0,73,2076:0,73,255:40,2 chr1 6536013 . C . PASS END=6536096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:81:40:0,81,1215:0,120,255:40,2 chr1 6537087 . C . PASS END=6537088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 6537089 . G . PASS END=6537089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 6537090 . G . PASS END=6537090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 6537091 . C . PASS END=6537094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,993:0,84,255:28,0 chr1 6537095 . G . PASS END=6537140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,748:0,69,255:26,0 chr1 6537141 . G . PASS END=6537149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 6537589 . C . PASS END=6537590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 6537591 . T . PASS END=6537591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:17,0 chr1 6537592 . G . PASS END=6537605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 6537606 . A . PASS END=6537627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:24,0 chr1 6537628 . G . PASS END=6537628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 6537629 . C . PASS END=6537673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,817:0,69,255:26,0 chr1 6537674 . G . PASS END=6537682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 6537683 . G . PASS END=6537683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 6537684 . C . PASS END=6537700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 6537701 . G . PASS END=6537701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:16,0 chr1 6537702 . T . PASS END=6537718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,659:0,41,255:18,0 chr1 6544475 . T . PASS END=6544484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 6544485 . G . PASS END=6544487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 6544488 . C . PASS END=6544488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 6544489 . T . PASS END=6544497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 6544498 . T . PASS END=6544503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 6544504 . C . PASS END=6544521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 6544522 . T . PASS END=6544522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 6544523 . C . PASS END=6544540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:15,0 chr1 6545384 . C . PASS END=6545389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 6545390 . A T, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.325;ReadPosRankSum=2.576;FractionInformativeReads=0.947;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,12,0:0.667,0.000:18:2,4,0:4,8,0:46:85,0,45,392,186,578:255,0,170:7,0:5.0000e+01,1.0639e-04,4.8379e+01,3.9236e+02,2.2056e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,5,7:3,3,7,5 chr1 6545391 . T . PASS END=6545393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 6545394 . C . PASS END=6545404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 6545405 . A . PASS END=6545406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 6545407 . G . PASS END=6545407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:19,0 chr1 6545408 . A . PASS END=6545411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr1 6545412 . C . PASS END=6545412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 6545413 . C . PASS END=6545420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,778:0,66,255:26,0 chr1 6545421 . G . PASS END=6545421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 6545422 . A . PASS END=6545427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:26,0 chr1 6545428 . C . PASS END=6545468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,947:0,72,255:26,0 chr1 6545469 . G . PASS END=6545469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 6545470 . C . PASS END=6545474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 6545475 . C . PASS END=6545475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 6545476 . G . PASS END=6545479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6545480 . G . PASS END=6545480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 6545481 . G . PASS END=6545483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6545484 . A . PASS END=6545495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 6545496 . G . PASS END=6545503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:15:0,39,585:0,45,255:13,0 chr1 6555576 . C . PASS END=6555578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1149:0,93,255:32,0 chr1 6555579 . G . PASS END=6555579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:31,0 chr1 6555580 . G . PASS END=6555580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 6555581 . T . PASS END=6555581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 6555582 . A . PASS END=6555632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:32:0,86,1120:0,86,255:36,0 chr1 6555633 . A . PASS END=6555633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr1 6555634 . G . PASS END=6555636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 6555637 . T . PASS END=6555637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1185:0,55,255:30,0 chr1 6555638 . C . PASS END=6555649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1156:0,83,255:32,0 chr1 6556553 . C . PASS END=6556573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,934:0,81,255:28,0 chr1 6556574 . C . PASS END=6556574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 6556575 . A . PASS END=6556575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 6556576 . T . PASS END=6556629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1163:0,83,255:33,0 chr1 6557019 . G . PASS END=6557046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 6557047 . G . PASS END=6557056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 6557057 . A . PASS END=6557057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 6557058 . A . PASS END=6557068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 6557069 . G . PASS END=6557091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 6557380 . C . PASS END=6557382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 6557383 . T . PASS END=6557383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:7,0 chr1 6566086 . C . PASS END=6566140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 6566141 . C . PASS END=6566141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 6566142 . C . PASS END=6566182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 6566183 . C . PASS END=6566183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 6566184 . T . PASS END=6566190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 6566191 . T . LowGQ END=6566191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 6566192 . G . PASS END=6566199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 6566200 . T . PASS END=6566204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6566205 . C . PASS END=6566205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 6566206 . A . PASS END=6566213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 6566214 . A . PASS END=6566214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 6566215 . A . PASS END=6566216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 6566217 . A . PASS END=6566217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 6566218 . T . PASS END=6566218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 6579505 . C . PASS END=6579569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:51:0,120,1800:0,137,255:40,0 chr1 6579570 . A . PASS END=6579571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 6585914 . T . PASS END=6586032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:37:0,84,1260:0,84,255:40,0 chr1 6586033 . T . PASS END=6586063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1162:0,83,255:40,0 chr1 6586756 . C . PASS END=6586757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 6586758 . G . PASS END=6586758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 6586759 . G . PASS END=6586773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,799:0,66,255:25,0 chr1 6586774 . A . PASS END=6586795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 6586796 . A . PASS END=6586796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 6586797 . C . PASS END=6586825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:29,0 chr1 6586826 . T . PASS END=6586826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 6586827 . C . PASS END=6586842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 6586843 . G . PASS END=6586863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 6586864 . C . PASS END=6586864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 6586865 . T . PASS END=6586865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6586866 . C . PASS END=6586872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:16,0 chr1 6586873 . A . PASS END=6586889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,450:0,36,255:13,0 chr1 6589054 . C . PASS END=6589055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 6589056 . A . PASS END=6589056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:32,0 chr1 6589057 . A . PASS END=6589062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1211:0,102,255:34,0 chr1 6589063 . A . PASS END=6589063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:28,0 chr1 6589064 . G . PASS END=6589150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:33:0,83,1186:0,83,255:40,0 chr1 6589151 . G . PASS END=6589151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1541:0,77,255:40,0 chr1 6589152 . C . PASS END=6589215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:32:0,82,1257:0,82,255:40,0 chr1 6589216 . C . PASS END=6589231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:25,0 chr1 6592028 . C . PASS END=6592139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:36:0,88,1365:0,88,255:40,0 chr1 6592523 . C . PASS END=6592527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 6592528 . T . PASS END=6592528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 6592529 . C . PASS END=6592530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 6592531 . T . PASS END=6592531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 6592532 . G . PASS END=6592778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:28:0,84,1063:0,84,255:40,0 chr1 6592779 . A . PASS END=6592779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1235:0,64,255:32,0 chr1 6592780 . C . PASS END=6592816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1250:0,91,255:35,0 chr1 6592817 . T . PASS END=6592820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 6593340 . C . PASS END=6593491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:81:33:0,81,1215:0,87,255:40,0 chr1 6593492 . A . PASS END=6593494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 6593495 . G . PASS END=6593501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 6601890 . C . PASS END=6601987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:43:0,108,1673:0,108,255:40,0 chr1 6604886 . C . PASS END=6604963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:51:0,120,1800:0,142,255:40,0 chr1 6604964 . G . PASS END=6604964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,10:79:5:79:0,5,1848:0,5,255:40,0 chr1 6604965 . G . PASS END=6605001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,120,255:40,0 chr1 6605105 . C . PASS END=6605240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:36:0,90,1350:0,92,255:40,0 chr1 6605566 . T . PASS END=6605719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:39:0,93,1395:0,109,255:40,0 chr1 6605720 . A . PASS END=6605734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,98,255:35,0 chr1 6605735 . C . PASS END=6605735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 6605736 . A . PASS END=6605757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1169:0,80,255:32,0 chr1 6605758 . A . PASS END=6605761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,76,255:26,0 chr1 6605762 . A . PASS END=6605762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:30:0,51,765:0,90,255:17,0 chr1 6605763 . G . PASS END=6605766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,585:0,31,255:13,0 chr1 6605767 . C . PASS END=6605767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:30:0,42,630:0,90,255:14,0 chr1 6605768 . C . PASS END=6605769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:39:28:0,39,585:0,84,255:13,0 chr1 6605770 . G GCCCATGAGCACA, 47.91 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=0.534;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:8,8,0:8,4,0:46:78,0,47,178,178,178:243,0,255:12,12:4.7911e+01,1.1364e-04,5.0000e+01,1.8268e+02,2.1268e+02,1.8569e+02:0.00,30.00,33.01,34.77,64.77,37.78:8,8,6,6:8,8,2,10 chr1 6605771 . T . LowGQ END=6605771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,12:28:0:28:0,0,139:255,0,255:22,0 chr1 6605772 . C . PASS END=6605773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:23,0 chr1 6605774 . T . LowGQ END=6605777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:0:26:0,0,703:0,0,255:23,0 chr1 6605778 . G . PASS END=6605779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr1 6605780 . A . PASS END=6605780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 6605781 . A . LowGQ END=6605782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,798:2,0,255:23,0 chr1 6605783 . T . PASS END=6605784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 6605785 . A . PASS END=6605785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:1:26:0,1,845:0,1,255:24,0 chr1 6605786 . T . PASS END=6605787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 6605788 . A . PASS END=6605790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,705:0,36,255:24,0 chr1 6605791 . A . PASS END=6605793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6605794 . G . PASS END=6605794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 6605795 . A . PASS END=6605802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,832:0,72,255:24,0 chr1 6605803 . G . PASS END=6605803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 6605804 . A . PASS END=6605809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 6605988 . A . PASS END=6605989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 6605990 . A . PASS END=6605990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:27,0 chr1 6605991 . A . PASS END=6605994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 6605995 . A . PASS END=6605995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:28,0 chr1 6605996 . A . PASS END=6605998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 6605999 . A . PASS END=6606000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,1086:0,41,255:30,1 chr1 6606001 . A . PASS END=6606003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:30,0 chr1 6606004 . G . PASS END=6606004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:1:32:0,1,814:0,1,255:28,0 chr1 6606005 . A . PASS END=6606005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,895:0,46,255:26,1 chr1 6606006 . G . PASS END=6606006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:1:32:0,1,782:0,1,255:28,0 chr1 6606007 . A . PASS END=6606010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:62:32:0,62,942:0,62,255:29,0 chr1 6606011 . A . PASS END=6606011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1107:0,88,255:30,0 chr1 6606012 . G . PASS END=6606012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:32,0 chr1 6606013 . C . PASS END=6606013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1272:0,94,255:33,0 chr1 6606014 . C . PASS END=6606014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1177:0,58,255:31,0 chr1 6606015 . T . PASS END=6606030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:36:0,91,1213:0,91,255:40,0 chr1 6606031 . A . PASS END=6606415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:42:0,84,1260:0,86,255:40,0 chr1 6606416 . G . PASS END=6606432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,69,255:26,0 chr1 6606433 . A . PASS END=6606433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 6606434 . C . PASS END=6606444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:22,0 chr1 6606445 . A . PASS END=6606445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,668:0,33,255:19,0 chr1 6606446 . A . PASS END=6606446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 6606447 . A . PASS END=6606449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6606450 . A . PASS END=6606450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 6609631 . C . PASS END=6609742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,114,1710:0,125,255:40,0 chr1 6609743 . G . PASS END=6609758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:39:0,84,1260:0,117,255:40,0 chr1 6610456 . C . PASS END=6610623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:35:0,87,1238:0,95,255:40,0 chr1 6610624 . G . PASS END=6610624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:30,0 chr1 6610625 . C . PASS END=6610642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 6610643 . A . PASS END=6610663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 6610664 . A . PASS END=6610664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 6610665 . A . PASS END=6610675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 6614167 . C . PASS END=6614168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 6614169 . G . LowGQ END=6614169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 6614170 . C . PASS END=6614192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:11,0 chr1 6614193 . C . PASS END=6614218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 6614219 . G . PASS END=6614229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,446:0,42,255:17,0 chr1 6614230 . G A, 46.96 PASS DP=17;MQ=250.00;MQRankSum=3.266;ReadPosRankSum=1.156;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,6,0:0.353,0.000:17:5,2,0:6,4,0:46:82,0,50,211,357,568:159,0,255:11,0:4.6959e+01,1.0924e-04,5.3000e+01,2.1093e+02,3.9141e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,2,3,3:5,6,5,1 chr1 6614231 . A . PASS END=6614232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 6614233 . A . PASS END=6614233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 6614234 . G . PASS END=6614244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 6614245 . A . PASS END=6614245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 6614246 . C . PASS END=6614247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 6614248 . C . PASS END=6614248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 6614249 . G . PASS END=6614267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,607:0,48,255:17,0 chr1 6614268 . G . PASS END=6614268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 6614269 . T . PASS END=6614284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 6614285 . G . PASS END=6614289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 6614290 . C . PASS END=6614291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:14,1 chr1 6614292 . G . PASS END=6614296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 6614297 . G . PASS END=6614310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:14:0,31,495:0,31,255:13,0 chr1 6614311 . G . PASS END=6614311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 6614312 . C . PASS END=6614315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 6614316 . G . PASS END=6614316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 6614317 . G . PASS END=6614328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 6614329 . G . PASS END=6614329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 6614330 . G . PASS END=6614344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 6614345 . G . PASS END=6614345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 6614346 . C . PASS END=6614350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr1 6614351 . C . PASS END=6614353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6614354 . G . PASS END=6614368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 6614369 . C . PASS END=6614370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 6614371 . C . PASS END=6614371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:9,0 chr1 6614372 . T . PASS END=6614375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 6614376 . T . PASS END=6614386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 6614387 . C . PASS END=6614390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:10,0 chr1 6614391 . A C, 77.11 PASS DP=10;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,10,0:1.000,0.000:10:0,6,0:0,4,0:27:115,30,0,388,30,388:255,30,0:0,0:7.7106e+01,2.7106e+01,8.4680e-03,3.8496e+02,6.1876e+01,3.8796e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,7:0,0,5,5:6614391 chr1 6614392 . C . PASS END=6614393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6614394 . C . PASS END=6614394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 6614395 . C . PASS END=6614409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 6614410 . C . PASS END=6614414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6614415 . A G, 77.11 PASS DP=10;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,10,0:1.000,0.000:10:0,6,0:0,4,0:27:115,30,0,388,30,388:255,30,0:0,0:7.7106e+01,2.7106e+01,8.4680e-03,3.8471e+02,6.1876e+01,3.8771e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,6:0,0,6,4:6614391 chr1 6614416 . C . PASS END=6614434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 6614435 . C . PASS END=6614435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6614436 . A . PASS END=6614438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 6614439 . A . PASS END=6614452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 6614453 . A . PASS END=6614476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 6614477 . A . PASS END=6614497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:17,0 chr1 6614498 . T . PASS END=6614532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:17,0 chr1 6614533 . C . PASS END=6614533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 6614534 . C . PASS END=6614534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 6614535 . G A, 40.91 PASS DP=16;MQ=250.00;MQRankSum=2.850;ReadPosRankSum=2.850;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,4,0:0.250,0.000:16:8,1,0:4,3,0:41:76,0,50,143,429,572:85,0,255:12,0:4.0910e+01,3.7407e-04,5.3000e+01,1.4308e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,2,2:6,6,3,1 chr1 6614536 . C . PASS END=6614543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 6614544 . G . PASS END=6614544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 6614545 . C . PASS END=6614555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 6614556 . C . PASS END=6614562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6615434 . A . PASS END=6615438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,690:0,57,255:19,0 chr1 6615439 . G . PASS END=6615455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,807:0,66,255:22,0 chr1 6615456 . T . PASS END=6615456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 6615457 . G . PASS END=6615492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:24,0 chr1 6615493 . C . PASS END=6615494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 6615495 . T . PASS END=6615517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 6615518 . T . PASS END=6615531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 6615532 . C . PASS END=6615542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 6615543 . A . PASS END=6615543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,881:0,45,255:24,0 chr1 6615544 . T . PASS END=6615551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 6615552 . T . PASS END=6615553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6615554 . G . PASS END=6615606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,778:0,66,255:24,0 chr1 6615607 . G . PASS END=6615624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,682:0,44,255:19,0 chr1 6630772 . A . PASS END=6630779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 6630780 . A . PASS END=6630780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,0 chr1 6630781 . A . PASS END=6630793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,878:0,62,255:26,0 chr1 6630794 . G . PASS END=6630805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:30,0 chr1 6630806 . T . PASS END=6630806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 6630807 . C . PASS END=6630836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:30:0,89,1119:0,89,255:36,0 chr1 6630837 . A . PASS END=6630837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:34,0 chr1 6630838 . G . PASS END=6630838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:35,0 chr1 6630839 . T . PASS END=6630839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 6630840 . T . PASS END=6630988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:30:0,82,1075:0,82,255:37,0 chr1 6630989 . A . PASS END=6630989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:31,0 chr1 6630990 . T . PASS END=6631068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1180:0,85,255:40,0 chr1 6631069 . C . PASS END=6631105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:37:0,98,1388:0,98,255:40,0 chr1 6631106 . C T, 49.54 PASS DP=41;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=1.503;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,19,0:0.463,0.000:41:8,13,0:14,6,0:48:84,0,50,679,779,1458:255,0,255:21,0:4.9538e+01,7.0152e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,12,7:15,7,14,5 chr1 6631107 . C . PASS END=6631143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,102,1530:0,117,255:39,0 chr1 6631144 . G . PASS END=6631193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,96,255:38,0 chr1 6631194 . G . PASS END=6631211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 6631212 . G . PASS END=6631212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 6631213 . C . PASS END=6631216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:20,0 chr1 6631217 . A . PASS END=6631219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 6631220 . G . PASS END=6631224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 6631225 . A . PASS END=6631225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 6631226 . A . PASS END=6631232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 6631233 . T . PASS END=6631237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6631238 . C . PASS END=6631244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6631245 . C . PASS END=6631269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:18,0 chr1 6631270 . C . PASS END=6631275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,540:0,34,255:13,0 chr1 6634691 . A . PASS END=6634691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:22,0 chr1 6634692 . T . PASS END=6634693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6634694 . A . PASS END=6634694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 6634695 . G . PASS END=6634696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6634697 . T . PASS END=6634697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 6634698 . A . PASS END=6634698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6634699 . T . PASS END=6634699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 6634700 . G . PASS END=6634716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 6634717 . G . PASS END=6634717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6634718 . C . PASS END=6634721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:27,0 chr1 6634722 . G . PASS END=6634726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:29,1 chr1 6634727 . A . PASS END=6634727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:31,0 chr1 6634728 . A . PASS END=6634849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1138:0,83,255:38,0 chr1 6634850 . T . PASS END=6634850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr1 6634851 . A . PASS END=6634875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1194:0,83,255:34,0 chr1 6634876 . G . PASS END=6634876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 6634877 . G . PASS END=6634878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 6634879 . G . PASS END=6634885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 6634886 . G . PASS END=6634886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:22,0 chr1 6634887 . C . PASS END=6634921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:24,0 chr1 6634922 . A . PASS END=6634926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:18,0 chr1 6634927 . G . PASS END=6634927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:16,0 chr1 6634928 . C . PASS END=6634934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,735:0,47,255:19,0 chr1 6634935 . C . PASS END=6634943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr1 6634944 . T . PASS END=6634944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 6634945 . G . PASS END=6634950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6634951 . T . PASS END=6634951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 6634952 . G . PASS END=6634954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 6634955 . A . PASS END=6634955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 6634956 . G . PASS END=6634979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 6634980 . T . PASS END=6634980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6634981 . G . PASS END=6634983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6634984 . C . PASS END=6634992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,810:0,53,255:19,0 chr1 6634993 . G . PASS END=6634995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6634996 . C . PASS END=6635006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 6635007 . T . PASS END=6635007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,507:0,24,255:15,0 chr1 6635008 . T . PASS END=6635015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,668:0,43,255:19,0 chr1 6635016 . C . PASS END=6635016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:9:19:0,9,515:0,9,255:17,0 chr1 6635017 . C . PASS END=6635020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,609:0,57,255:19,0 chr1 6635021 . C . PASS END=6635021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 6635022 . G . PASS END=6635022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 6635023 . G . PASS END=6635023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 6635024 . C . PASS END=6635024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 6635025 . A . PASS END=6635025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,703:0,63,255:21,0 chr1 6635026 . G . PASS END=6635026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,623:0,16,255:19,0 chr1 6635027 . T . PASS END=6635027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,746:0,66,255:22,0 chr1 6635028 . T . PASS END=6635028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 6635029 . G . PASS END=6635030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,742:0,66,255:22,0 chr1 6635031 . C . PASS END=6635031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:21,0 chr1 6635032 . C . PASS END=6635032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6635033 . A . PASS END=6635034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr1 6635035 . G . PASS END=6635044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 6635045 . G . PASS END=6635048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6635049 . C . PASS END=6635050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6635051 . G . PASS END=6635053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 6635054 . G . PASS END=6635056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 6635057 . C . PASS END=6635057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:22,0 chr1 6635058 . T . PASS END=6635062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:23,0 chr1 6635063 . A . PASS END=6635063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 6635064 . A . PASS END=6635066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 6635067 . T . PASS END=6635067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 6635068 . G . PASS END=6635068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 6635069 . A . PASS END=6635070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 6635071 . T . PASS END=6635071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,784:0,20,255:23,0 chr1 6635072 . G . PASS END=6635072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 6635073 . G . PASS END=6635074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 6635075 . A . PASS END=6635076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 6635077 . G . PASS END=6635078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 6635079 . T . PASS END=6635079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,978:0,60,255:27,0 chr1 6635080 . G . PASS END=6635089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1094:0,87,255:29,0 chr1 6635090 . T . PASS END=6635090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 6635091 . C . PASS END=6635093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 6635094 . A . PASS END=6635095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 6635096 . G . PASS END=6635096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,912:0,37,255:25,0 chr1 6635097 . C . PASS END=6635098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 6635099 . T . PASS END=6635099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,958:0,48,255:26,0 chr1 6635100 . G . PASS END=6635102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 6635103 . C . PASS END=6635107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 6635108 . T . PASS END=6635114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 6635115 . A . PASS END=6635115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:24,0 chr1 6635116 . C . PASS END=6635150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr1 6635151 . T . PASS END=6635152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 6635153 . G . PASS END=6635177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,878:0,66,255:24,0 chr1 6635178 . G . PASS END=6635187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 6635188 . T . PASS END=6635188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 6635189 . G . PASS END=6635193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,698:0,54,255:18,0 chr1 6635194 . G . PASS END=6635209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,534:0,54,255:18,0 chr1 6635210 . G . PASS END=6635211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6635212 . C . PASS END=6635230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 6635231 . A G, 103.27 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:53:141,56,0,678,56,678:255,57,0:0,0:1.0327e+02,5.3269e+01,2.0450e-05,4.5000e+02,8.8039e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,10:0,0,12,7 chr1 6635232 . A . PASS END=6635268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 6635269 . C . PASS END=6635277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 6635278 . G . PASS END=6635278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6635279 . C . PASS END=6635301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,660:0,43,255:19,0 chr1 6635302 . C . PASS END=6635302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 6635303 . A . PASS END=6635308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 6635309 . C . PASS END=6635309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 6635310 . A . PASS END=6635331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,692:0,54,255:19,0 chr1 6635332 . C . PASS END=6635340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,671:0,60,255:21,0 chr1 6635341 . G . PASS END=6635342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6635343 . G . PASS END=6635346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 6635347 . T . PASS END=6635352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6635353 . C . PASS END=6635353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6635354 . A . PASS END=6635361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,735:0,47,255:19,0 chr1 6635362 . C . PASS END=6635365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6635366 . G . PASS END=6635366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 6635367 . C . PASS END=6635367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6635368 . T . PASS END=6635368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6635369 . G . PASS END=6635369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6635370 . T . PASS END=6635370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 6635371 . G . PASS END=6635372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6635373 . A . PASS END=6635373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6635374 . T . PASS END=6635374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:18,0 chr1 6635375 . G . PASS END=6635402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,653:0,43,255:19,0 chr1 6635403 . T . PASS END=6635403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:16,0 chr1 6635404 . G . PASS END=6635432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,515:0,45,255:17,0 chr1 6635433 . G . PASS END=6635445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,482:0,39,255:13,0 chr1 6635446 . C . PASS END=6635446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 6635447 . T . PASS END=6635450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 6635451 . A . PASS END=6635451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 6635452 . G . PASS END=6635452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6636475 . C . PASS END=6636477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 6636478 . T . PASS END=6636478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 6636479 . T . PASS END=6636498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:30:0,85,1094:0,85,255:40,0 chr1 6636499 . C . PASS END=6636641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1215:0,84,255:40,0 chr1 6636642 . A . PASS END=6636681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr1 6636682 . A . PASS END=6636682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 6636683 . A . PASS END=6636685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 6636686 . A . PASS END=6636687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 6637010 . G . PASS END=6637130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:32:0,81,1215:0,92,255:40,0 chr1 6638713 . A . PASS END=6638716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:19,0 chr1 6638717 . C . PASS END=6638721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6638722 . G . PASS END=6638722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 6638723 . A . PASS END=6638725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6638726 . C . PASS END=6638726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 6638727 . C . PASS END=6638731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6638732 . T . PASS END=6638738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,706:0,46,255:19,0 chr1 6638739 . A . PASS END=6638745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:20,0 chr1 6638746 . A . PASS END=6638746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 6638747 . G . PASS END=6638773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 6638774 . C . PASS END=6638776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6638777 . C . PASS END=6638785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6638786 . T . PASS END=6638786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 6638787 . G . PASS END=6638795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 6638796 . T . PASS END=6638841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,712:0,44,255:19,0 chr1 6638842 . CGCT C, 0.03 DRAGENIndelHardQUAL DP=20;MQ=250.00;MQRankSum=2.583;ReadPosRankSum=1.701;FractionInformativeReads=0.850;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:14,3,0:0.176,0.000:17:10,3,0:4,0,0:21:0,6,56,42,398,434:17,0,255:14,5:3.4380e-02,2.1032e+01,7.4032e+01,7.6900e+01,4.4853e+02,4.5000e+02:0.00,15.00,18.00,34.77,49.77,37.77:7,7,2,1:7,7,2,1 chr1 6638843 . G . LowGQ END=6638846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:21:0,0,508:14,0,255:17,5 chr1 6638847 . C . PASS END=6638860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:17,0 chr1 6638861 . G . PASS END=6638864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:14,0 chr1 6638865 . G . PASS END=6638865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 6638866 . G . PASS END=6638866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 6638867 . G . PASS END=6638880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,47,255:16,0 chr1 6638881 . T . PASS END=6638881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 6638882 . T . PASS END=6638890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:19,0 chr1 6638891 . C . PASS END=6638892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 6638893 . T . PASS END=6638895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 6638896 . A . PASS END=6638898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 6638899 . C . PASS END=6638901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6638902 . C . PASS END=6638902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 6638903 . T . PASS END=6638914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 6638915 . A . PASS END=6638915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 6638916 . G . PASS END=6638932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 6638933 . C . PASS END=6638933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 6638934 . T . PASS END=6638979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,892:0,62,255:26,0 chr1 6638980 . G . PASS END=6638991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 6638992 . A . PASS END=6639001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:26,0 chr1 6639002 . G . PASS END=6639002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 6639003 . C . PASS END=6639005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr1 6639006 . G . PASS END=6639006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6639007 . C . PASS END=6639007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6639008 . G . PASS END=6639009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6639010 . G . PASS END=6639010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 6639011 . C . PASS END=6639012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6639013 . T . PASS END=6639037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 6639038 . T . PASS END=6639038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 6639039 . G . PASS END=6639153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1238:0,81,255:38,0 chr1 6639154 . C . PASS END=6639154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1174:0,67,255:30,0 chr1 6639155 . T . PASS END=6639254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1164:0,83,255:34,0 chr1 6639255 . C . PASS END=6639255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 6639256 . C . PASS END=6639259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 6639260 . T . PASS END=6639275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1047:0,71,255:26,0 chr1 6639276 . T . PASS END=6639276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6639277 . G . PASS END=6639277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6639278 . C . PASS END=6639280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6639281 . A . PASS END=6639311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,939:0,64,255:26,0 chr1 6639312 . T . PASS END=6639315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 6639316 . T . PASS END=6639318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 6639319 . A . PASS END=6639319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 6639320 . C . PASS END=6639320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 6639321 . A . PASS END=6639360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1045:0,84,255:35,0 chr1 6639361 . T . PASS END=6639361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:28,0 chr1 6639362 . G . PASS END=6639531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1213:0,86,255:39,0 chr1 6639532 . G . PASS END=6639532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:37,0 chr1 6639533 . T . PASS END=6639562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1410:0,111,255:40,0 chr1 6639563 . C . PASS END=6639563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:71:44:0,71,1551:0,71,255:40,0 chr1 6639564 . C . PASS END=6639610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1260:0,92,255:40,0 chr1 6639611 . T . PASS END=6639611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:26,0 chr1 6639612 . C . PASS END=6639615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 6639616 . A . PASS END=6639644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 6640670 . A . PASS END=6640683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:18,0 chr1 6640684 . C . PASS END=6640684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 6640685 . G . PASS END=6640694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 6640695 . G . PASS END=6640784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1055:0,80,255:35,0 chr1 6640785 . C . PASS END=6640785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6640786 . A . PASS END=6640820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 6640821 . T . PASS END=6640821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 6640822 . C . PASS END=6640823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6640824 . A . PASS END=6640833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,80,255:23,0 chr1 6640834 . C . PASS END=6640835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:51:32:0,51,765:0,96,255:19,0 chr1 6640836 . G . PASS END=6640839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,900:0,77,255:21,0 chr1 6640840 . T . PASS END=6640843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:28:0,54,810:0,84,255:19,0 chr1 6640844 . T . PASS END=6640892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:24,0 chr1 6640893 . T . PASS END=6640893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:22,0 chr1 6640894 . C . PASS END=6640906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 6640907 . T . PASS END=6640907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr1 6640908 . T . PASS END=6640949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:28:0,80,1172:0,80,255:36,0 chr1 6640950 . A . PASS END=6640950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:32,0 chr1 6640951 . G . PASS END=6640966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:33:0,88,1219:0,88,255:34,0 chr1 6640967 . A . PASS END=6640967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:30,0 chr1 6640968 . G . PASS END=6640982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:30,0 chr1 6640983 . C . PASS END=6640985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 6640986 . A . PASS END=6640986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 6640987 . G . PASS END=6641022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,845:0,69,255:25,0 chr1 6641023 . T . PASS END=6641023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 6641024 . T . PASS END=6641043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:23,0 chr1 6641044 . T . PASS END=6641044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 6641045 . G . PASS END=6641047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6641048 . C . PASS END=6641081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,631:0,43,255:19,0 chr1 6641082 . T . PASS END=6641082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 6641083 . G . PASS END=6641083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 6641084 . A . PASS END=6641084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6641085 . A . PASS END=6641085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 6641086 . C . PASS END=6641098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 6641099 . G . PASS END=6641099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 6641100 . A . PASS END=6641111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 6641112 . T . PASS END=6641144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,562:0,40,255:19,0 chr1 6641145 . T . PASS END=6641145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 6641146 . A . PASS END=6641150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6641151 . C . PASS END=6641151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 6641152 . C . PASS END=6641171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,599:0,51,255:17,0 chr1 6641172 . G . PASS END=6641172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 6641173 . C . PASS END=6641179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:16,0 chr1 6641180 . A . PASS END=6641180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 6641181 . G . PASS END=6641181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 6641182 . T . PASS END=6641183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 6641184 . C . PASS END=6641189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 6641190 . G . PASS END=6641207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,495:0,32,255:13,0 chr1 6641208 . C . PASS END=6641208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 6641209 . A . PASS END=6641209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 6641210 . G . PASS END=6641219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 6641220 . A . PASS END=6641220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 6641221 . G . PASS END=6641221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6641222 . G . PASS END=6641223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 6641224 . C . PASS END=6641235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:11:0,27,405:0,33,255:9,0 chr1 6641236 . C . PASS END=6641328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:12,0 chr1 6641329 . A . PASS END=6641329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 6641330 . G . PASS END=6641346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 6641347 . C . PASS END=6641359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 6642118 . T . PASS END=6642120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 6642121 . G . PASS END=6642135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:28,0 chr1 6642136 . G . PASS END=6642136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 6642137 . T . PASS END=6642139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 6642140 . A . PASS END=6642140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 6642141 . G . PASS END=6642141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 6642142 . G . PASS END=6642143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:28,0 chr1 6642144 . T . PASS END=6642160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 6642161 . A . PASS END=6642165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1124:0,77,255:27,0 chr1 6642166 . T . PASS END=6642168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6642169 . G . PASS END=6642171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1070:0,74,255:27,0 chr1 6642172 . C . PASS END=6642174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6642175 . G . PASS END=6642175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 6642176 . A . PASS END=6642182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 6642183 . G . PASS END=6642227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,939:0,68,255:27,0 chr1 6642228 . T . PASS END=6642229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:27:0,54,810:0,81,255:19,0 chr1 6642230 . A . PASS END=6642233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 6642234 . A . PASS END=6642234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 6642235 . G . PASS END=6642246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6642247 . G . PASS END=6642250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 6642251 . C . PASS END=6642253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6642254 . T . PASS END=6642264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,810:0,53,255:19,0 chr1 6642265 . C . PASS END=6642267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr1 6642268 . G . PASS END=6642268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 6642269 . C . PASS END=6642278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,740:0,66,255:22,0 chr1 6642279 . A . PASS END=6642279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 6642280 . A . PASS END=6642280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 6642281 . A . PASS END=6642281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:20,0 chr1 6642282 . A . PASS END=6642285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 6642286 . A . PASS END=6642286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 6642287 . C . PASS END=6642306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,939:0,69,255:25,0 chr1 6642307 . C . PASS END=6642307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 6642308 . C . PASS END=6642308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6642309 . C . PASS END=6642310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 6642311 . C . PASS END=6642312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 6642313 . T . PASS END=6642313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 6642314 . G . PASS END=6642334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,878:0,72,255:25,0 chr1 6642335 . A . PASS END=6642335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:24,0 chr1 6642336 . A . PASS END=6642337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 6642338 . A . PASS END=6642339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr1 6642340 . T . PASS END=6642340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 6642341 . A . PASS END=6642342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 6642343 . C . PASS END=6642345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 6642346 . A . PASS END=6642346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 6642347 . A . PASS END=6642348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 6642349 . G . PASS END=6642349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:19,0 chr1 6642350 . T . PASS END=6642359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:21,0 chr1 6645979 . G . PASS END=6645979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 6645980 . A . PASS END=6645980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 6645981 . A . PASS END=6646158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1103:0,81,255:40,0 chr1 6646159 . G . PASS END=6646159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:36,1 chr1 6646160 . A . PASS END=6646160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:24:38:0,24,1251:0,24,255:34,1 chr1 6646161 . A . PASS END=6646161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:37,0 chr1 6646162 . G . PASS END=6646185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,88,255:36,0 chr1 6646186 . G . PASS END=6646204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:25:0,62,922:0,62,255:25,0 chr1 6646205 . A . PASS END=6646205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 6646206 . A . PASS END=6646209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 6646210 . G . PASS END=6646210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 6646211 . T . PASS END=6646215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr1 6646216 . T . PASS END=6646231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:17:0,44,643:0,44,255:19,0 chr1 6646637 . C . PASS END=6646637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6646638 . G . PASS END=6646647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 6646648 . T . PASS END=6646649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,526:0,43,255:20,0 chr1 6646650 . C . PASS END=6646652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 6646653 . A . PASS END=6646653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr1 6646654 . G . PASS END=6646654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,532:0,19,255:20,0 chr1 6646655 . G . PASS END=6646659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,757:0,72,255:24,0 chr1 6646660 . C . PASS END=6646660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 6646661 . T . PASS END=6646661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,735:0,39,255:21,0 chr1 6646662 . C . PASS END=6646662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6646663 . T . PASS END=6646663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,770:0,41,255:21,0 chr1 6646664 . T . PASS END=6646664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6646665 . C . PASS END=6646665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,677:0,39,255:20,0 chr1 6646666 . C . PASS END=6646677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 6646678 . G . PASS END=6646678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:20,0 chr1 6646679 . G . PASS END=6646694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:24,0 chr1 6646695 . C . PASS END=6646695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 6646696 . T . PASS END=6646699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,895:0,72,255:26,0 chr1 6646700 . G . PASS END=6646723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1089:0,82,255:37,0 chr1 6646755 . G . PASS END=6646847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:40:0,82,1395:0,82,255:40,0 chr1 6647265 . T . PASS END=6647266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6647267 . T . PASS END=6647271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 6647272 . C . PASS END=6647272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 6647273 . C . PASS END=6647288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,988:0,84,255:30,0 chr1 6647289 . A . PASS END=6647289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 6647290 . T . PASS END=6647299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1164:0,90,255:31,0 chr1 6647300 . G . PASS END=6647300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 6647301 . G . PASS END=6647326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1052:0,90,255:31,0 chr1 6647327 . T . PASS END=6647327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr1 6647328 . C . PASS END=6647331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 6647332 . G . PASS END=6647343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 6647344 . C . PASS END=6647344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 6647345 . C . PASS END=6647351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr1 6647538 . T . PASS END=6647545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 6647546 . C . PASS END=6647560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:20,0 chr1 6647561 . C . PASS END=6647563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 6647564 . G . PASS END=6647566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6647567 . T . PASS END=6647569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6647570 . G . PASS END=6647570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6647571 . A . PASS END=6647571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 6647572 . C . PASS END=6647592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,817:0,63,255:23,0 chr1 6647593 . C . PASS END=6647594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 6647595 . T . PASS END=6647595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 6647596 . T . PASS END=6647596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 6647597 . C . PASS END=6647606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 6647607 . G . PASS END=6647607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 6647608 . G . PASS END=6647613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6647614 . A . PASS END=6647614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 6647615 . G . PASS END=6647633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:23,0 chr1 6647634 . T . PASS END=6647634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6647635 . G . PASS END=6647648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:20,0 chr1 6647649 . T . PASS END=6647649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,610:0,10,255:17,0 chr1 6647650 . C . PASS END=6647651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 6647652 . A . PASS END=6647663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6647664 . C . PASS END=6647666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 6647667 . C . PASS END=6647679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 6647680 . A . PASS END=6647680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:13,0 chr1 6647681 . G . PASS END=6647682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 6647683 . C . PASS END=6647692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 6648120 . G . PASS END=6648123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 6648124 . G . PASS END=6648124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 6648125 . A . PASS END=6648210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,980:0,81,255:40,0 chr1 6648211 . A . PASS END=6648211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 6648212 . A . PASS END=6648219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1169:0,80,255:30,0 chr1 6648220 . C . PASS END=6648220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 6648221 . A . PASS END=6648227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 6648228 . C . PASS END=6648228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:26,0 chr1 6648229 . C . PASS END=6648230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 6648231 . C . PASS END=6648249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,923:0,75,255:26,0 chr1 6648250 . A . PASS END=6648250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr1 6648251 . C . PASS END=6648254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 6648255 . A . PASS END=6648255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 6648256 . G . PASS END=6648256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 6648338 . C . PASS END=6648368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 6648369 . C . PASS END=6648369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 6648370 . G . PASS END=6648393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr1 6648394 . T . PASS END=6648394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6648395 . T . PASS END=6648414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 6648415 . G . PASS END=6648415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 6648416 . A . PASS END=6648419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 6648420 . G . PASS END=6648426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,47,255:19,0 chr1 6648427 . C . PASS END=6648435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,41,255:13,0 chr1 6648436 . C . PASS END=6648446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 6648447 . C . PASS END=6648447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 6648448 . C . PASS END=6648448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:10,0 chr1 6648449 . G . PASS END=6648450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 6648451 . C . PASS END=6648452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 6648453 . T . PASS END=6648458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 6648459 . G . PASS END=6648459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 6648460 . G . PASS END=6648464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 6648465 . G . PASS END=6648465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 6648466 . C . PASS END=6648470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 6648471 . C . PASS END=6648471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6648472 . T . PASS END=6648481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 6648482 . T . PASS END=6648502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:9,0 chr1 6648816 . C . PASS END=6648846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 6648847 . G . PASS END=6648867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 6648868 . T . PASS END=6648868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 6648869 . G . PASS END=6648878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 6648879 . A . PASS END=6648879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 6648880 . G . PASS END=6648882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6648883 . T . PASS END=6648883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 6648884 . G . PASS END=6648887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 6648888 . A . PASS END=6648903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:19:0,44,698:0,44,255:19,0 chr1 6648904 . G . PASS END=6648904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 6648976 . G . PASS END=6648984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr1 6648985 . C . PASS END=6648985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,607:0,8,255:16,0 chr1 6648986 . G . PASS END=6649000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,631:0,43,255:19,0 chr1 6649001 . T . PASS END=6649001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:20:0,26,523:0,26,255:17,0 chr1 6649002 . C . PASS END=6649004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 6649005 . C . PASS END=6649021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 6649022 . A . PASS END=6649035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,737:0,57,255:19,0 chr1 6649036 . C . PASS END=6649039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 6649040 . A . PASS END=6649040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 6649041 . G . PASS END=6649045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6649046 . G . PASS END=6649049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6649050 . C . PASS END=6649054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6649055 . T . PASS END=6649055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 6649056 . C . PASS END=6649061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 6649062 . G . PASS END=6649083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:18:0,42,630:0,44,255:19,0 chr1 6649084 . G . PASS END=6649084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 6649085 . C . PASS END=6649085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 6649086 . G . PASS END=6649102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,482:0,32,255:13,0 chr1 6649103 . A . PASS END=6649103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:10,0 chr1 6649104 . G . PASS END=6649120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:11,0 chr1 6649121 . C . PASS END=6649131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6649132 . G . PASS END=6649136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 6649137 . G . PASS END=6649154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 6649155 . C . PASS END=6649158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6649159 . G . PASS END=6649162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6649163 . C . PASS END=6649166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 6649167 . G . PASS END=6649168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6649169 . T . PASS END=6649171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 6649172 . C . PASS END=6649174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6649175 . G . PASS END=6649179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 6649180 . A . PASS END=6649190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 6649191 . A . PASS END=6649215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 6649216 . G . PASS END=6649227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,202:0,18,202:6,0 chr1 6649228 . T G, 24.71 PASS DP=6;MQ=250.00;MQRankSum=1.380;ReadPosRankSum=1.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,2,0:0.333,0.000:6:2,2,0:2,0,0:25:59,0,50,72,143,214:59,0,137:4,0:2.4708e+01,1.4737e-02,5.3015e+01,7.1516e+01,1.7760e+02,2.1733e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,2,0:2,2,2,0 chr1 6649229 . C . PASS END=6649258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 6649259 . A . PASS END=6649259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 6649260 . C . PASS END=6649265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 6649266 . C . PASS END=6649272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 6653425 . C . PASS END=6653428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 6653429 . T . PASS END=6653429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 6653430 . G . PASS END=6653440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr1 6653441 . G . PASS END=6653494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1039:0,81,255:40,0 chr1 6653495 . A . PASS END=6653495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1358:0,71,255:36,0 chr1 6653496 . A . PASS END=6653537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1396:0,101,255:39,0 chr1 6653538 . G . PASS END=6653538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:35,0 chr1 6653539 . G . PASS END=6653621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:34:0,82,1305:0,82,255:36,0 chr1 6653622 . A . PASS END=6653622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:31,0 chr1 6653623 . G . PASS END=6653630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 6653631 . C . PASS END=6653631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 6653632 . C . PASS END=6653632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:25,0 chr1 6653633 . A . PASS END=6653645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,1000:0,68,255:25,0 chr1 6653646 . C . PASS END=6653647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 6653648 . A . PASS END=6653665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 6653666 . C . PASS END=6653680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:18:0,44,637:0,44,255:18,0 chr1 6653681 . T . PASS END=6653682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 6653683 . C . PASS END=6653691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 6653692 . G . PASS END=6653696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 6653697 . C . PASS END=6653697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 6653698 . C . PASS END=6653706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,457:0,36,255:12,0 chr1 6653707 . C . PASS END=6653709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 6653710 . C . PASS END=6653710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:7,0 chr1 6653711 . A . PASS END=6653712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 6653713 . A . PASS END=6653713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr1 6653714 . T . PASS END=6653718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 6654168 . T . PASS END=6654170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,174,255:40,0 chr1 6655425 . T . PASS END=6655430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1060:0,93,255:32,0 chr1 6655431 . G . PASS END=6655431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 6655432 . A . PASS END=6655437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1209:0,96,255:32,0 chr1 6655438 . G . PASS END=6655438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:30,0 chr1 6655439 . A . PASS END=6655617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:93:33:0,93,1231:0,95,255:40,0 chr1 6659107 . C . PASS END=6659155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 6659156 . A . PASS END=6659156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 6659157 . C . PASS END=6659173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,584:0,41,255:17,0 chr1 6659174 . C . PASS END=6659174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 6659175 . G . PASS END=6659194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 6659195 . G . PASS END=6659200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:22,0 chr1 6659201 . T . PASS END=6659201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 6659202 . G . PASS END=6659211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:23,0 chr1 6659212 . T . PASS END=6659212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:22,0 chr1 6659213 . A . PASS END=6659223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:24,0 chr1 6659224 . A . PASS END=6659224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:23,0 chr1 6659225 . C . PASS END=6659227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 6659228 . T . PASS END=6659228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 6659229 . G . PASS END=6659236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr1 6659237 . T . PASS END=6659237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr1 6659238 . G . PASS END=6659253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:26,0 chr1 6659254 . A . PASS END=6659254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 6659255 . T . PASS END=6659262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 6659263 . A . PASS END=6659264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 6659265 . C . PASS END=6659265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6659266 . C . PASS END=6659269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 6659270 . C . PASS END=6659270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6659271 . A . PASS END=6659272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 6659273 . G . PASS END=6659274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6659275 . C . PASS END=6659278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 6659279 . C . PASS END=6659287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 6659288 . A . PASS END=6659288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 6659289 . G . PASS END=6659294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1141:0,90,255:30,0 chr1 6659295 . G . PASS END=6659295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 6659296 . T . PASS END=6659328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,92,255:35,0 chr1 6659329 . C . PASS END=6659329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:33,0 chr1 6659330 . A . PASS END=6659459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:34:0,92,1294:0,92,255:38,0 chr1 6659460 . G . PASS END=6659460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 6659461 . C . PASS END=6659476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1379:0,95,255:36,0 chr1 6659477 . A . PASS END=6659477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr1 6659478 . C . PASS END=6659478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 6659479 . A . PASS END=6659479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:34,0 chr1 6659480 . C . PASS END=6659487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:34,0 chr1 6659488 . T . PASS END=6659496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:71:29:0,71,1031:0,71,255:26,0 chr1 6659497 . G . PASS END=6659497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6659498 . A . PASS END=6659512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 6661857 . C . PASS END=6661858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 6661859 . G . PASS END=6661909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr1 6661910 . T . PASS END=6661910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 6661911 . G . PASS END=6661948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,800:0,66,255:26,0 chr1 6661949 . T . PASS END=6661949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 6661950 . G . PASS END=6661952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6661953 . G . PASS END=6661953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 6661954 . G . PASS END=6661957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6661958 . T . PASS END=6661958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 6661959 . A . PASS END=6661959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:18,0 chr1 6661960 . G . PASS END=6661961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 6661962 . A . PASS END=6661983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 6661984 . A . PASS END=6661988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:16,0 chr1 6661989 . C . PASS END=6661998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:15:0,36,540:0,44,255:12,0 chr1 6661999 . G . PASS END=6661999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:11,0 chr1 6662000 . C . PASS END=6662018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 6662019 . T . PASS END=6662060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 6662061 . A . PASS END=6662068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 6662069 . C . PASS END=6662091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 6662092 . C . PASS END=6662206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr1 6662207 . A . PASS END=6662209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 6662210 . G . PASS END=6662219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,233:0,18,233:6,0 chr1 6662220 . G . PASS END=6662249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,239:0,21,239:8,0 chr1 6662250 . G . PASS END=6662253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 6662254 . A . PASS END=6662254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 6662255 . G . PASS END=6662262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:13,0 chr1 6662263 . C . PASS END=6662263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 6662264 . C . PASS END=6662280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 6662281 . G . PASS END=6662304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 6662305 . A . PASS END=6662335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:35:12:0,35,427:0,35,255:13,0 chr1 6662336 . A . PASS END=6662336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 6662337 . G . PASS END=6662344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 6662345 . A . PASS END=6662345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 6662346 . G . PASS END=6662371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 6662372 . C . PASS END=6662372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 6662373 . C . PASS END=6662385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr1 6662386 . G . PASS END=6662388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 6662389 . G . PASS END=6662389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 6662390 . C . PASS END=6662390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr1 6662391 . G . PASS END=6662430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:20:8:0,20,288:0,20,255:9,0 chr1 6662431 . G . PASS END=6662432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6662433 . T . PASS END=6662433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 6662434 . G . PASS END=6662449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 6662450 . T . PASS END=6662508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:12,0 chr1 6662509 . C . PASS END=6662509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 6662510 . T . PASS END=6662527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 6662528 . T . PASS END=6662528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr1 6662529 . G . PASS END=6662544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 6662545 . G . PASS END=6662545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 6662546 . C . PASS END=6662556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 6662557 . C . PASS END=6662566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 6662567 . T . PASS END=6662569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,270:0,11,255:6,0 chr1 6662570 . C . PASS END=6662580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 6662581 . C . PASS END=6662583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 6662584 . G . PASS END=6662621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 6662622 . T . PASS END=6662633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6662634 . C . PASS END=6662674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 6662675 . T . PASS END=6662677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 6662678 . C . PASS END=6662729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,310:0,24,255:9,0 chr1 6662730 . G . PASS END=6662736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 6662737 . G . PASS END=6662757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 6662758 . C . PASS END=6662761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 6662762 . A . PASS END=6662770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6662771 . T . PASS END=6662814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:12,0 chr1 6662815 . C . PASS END=6662864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 6662865 . C . PASS END=6662866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 6662867 . G . PASS END=6662868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 6662869 . T . PASS END=6662869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 6662870 . C . PASS END=6662870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 6662871 . G . PASS END=6662875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 6662876 . A . PASS END=6662876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 6662877 . T . PASS END=6662877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 6674127 . A . PASS END=6674127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6674128 . T . PASS END=6674130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 6674131 . A . PASS END=6674131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 6674132 . C . PASS END=6674133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6674134 . C . PASS END=6674134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 6674135 . T . PASS END=6674165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,621:0,41,255:19,0 chr1 6675818 . A . PASS END=6675883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:39:0,84,1413:0,84,255:40,0 chr1 6676817 . G . PASS END=6676918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:37:0,93,1252:0,94,255:40,0 chr1 6679863 . G . PASS END=6679864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 6679865 . A . PASS END=6679865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 6679866 . C . PASS END=6679876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 6679877 . G . PASS END=6679878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 6679879 . G . PASS END=6679885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6679886 . C . PASS END=6679892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 6679893 . G . PASS END=6679894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 6679895 . T . PASS END=6679905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 6679906 . C . PASS END=6679910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 6679911 . A . PASS END=6679915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 6679916 . T . PASS END=6679916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6679917 . G . PASS END=6679945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 6679946 . A . PASS END=6679953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 6679954 . C . PASS END=6679963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 6679964 . G . PASS END=6679964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 6679965 . C . PASS END=6679970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 6679971 . C . PASS END=6679971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6679972 . C . PASS END=6679972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 6679973 . A . PASS END=6679973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 6679974 . G . PASS END=6679974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 6679975 . T . PASS END=6679975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 6679976 . C . PASS END=6679978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 6679979 . T . PASS END=6679979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 6679980 . G . PASS END=6679997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr1 6679998 . C . PASS END=6680008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 6680009 . T . PASS END=6680009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6680010 . C . PASS END=6680026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:19,0 chr1 6680027 . G . PASS END=6680036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 6680037 . T . PASS END=6680037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 6680038 . T . PASS END=6680046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 6680047 . A . PASS END=6680047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 6680048 . C . PASS END=6680050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 6680051 . A . PASS END=6680051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 6680052 . A . PASS END=6680072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,862:0,64,255:26,0 chr1 6680073 . A . PASS END=6680073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:22,0 chr1 6680074 . A . PASS END=6680101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,789:0,61,255:26,0 chr1 6680102 . T . PASS END=6680102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6680103 . G . PASS END=6680104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 6680105 . T . PASS END=6680112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 6680113 . G . PASS END=6680113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 6680114 . G . PASS END=6680118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 6680119 . A . PASS END=6680120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,836:0,67,255:26,0 chr1 6680121 . G . PASS END=6680125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6680126 . C . PASS END=6680155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 6680156 . T . PASS END=6680156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 6680157 . G . PASS END=6680171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr1 6680172 . A . PASS END=6680180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,58,255:20,0 chr1 6680181 . A . PASS END=6680184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:21,0 chr1 6680185 . C . PASS END=6680186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 6680187 . A . PASS END=6680193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 6680194 . A . PASS END=6680194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 6680195 . G . PASS END=6680198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 6680199 . A . PASS END=6680199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,824:0,39,255:23,0 chr1 6680200 . T . PASS END=6680219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 6680220 . C . PASS END=6680227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 6680228 . G . PASS END=6680228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 6680229 . G . PASS END=6680229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6680230 . G . PASS END=6680241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 6680242 . A . PASS END=6680243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:22,0 chr1 6680244 . A . PASS END=6680266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,873:0,62,255:26,0 chr1 6680267 . C . PASS END=6680267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr1 6680268 . A . PASS END=6680279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:26:0,70,994:0,70,255:26,0 chr1 6680280 . G . PASS END=6680280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6680281 . A . PASS END=6680281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 6680282 . T . PASS END=6680282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6680283 . C . PASS END=6680286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:26,0 chr1 6680287 . T . PASS END=6680290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6680291 . A . PASS END=6680291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,935:0,54,255:25,0 chr1 6680292 . G . PASS END=6680292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6680293 . A . PASS END=6680293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 6680294 . A . PASS END=6680295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 6680296 . T . PASS END=6680308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,840:0,64,255:26,0 chr1 6680309 . C . PASS END=6680309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6680310 . A . PASS END=6680311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:27,0 chr1 6680312 . A . PASS END=6680312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6680313 . C . PASS END=6680313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 6680314 . G . PASS END=6680315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 6680316 . A . PASS END=6680316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:28,0 chr1 6680317 . C . PASS END=6680319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:31,0 chr1 6680320 . T . PASS END=6680320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 6680321 . C . PASS END=6680332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1117:0,80,255:29,0 chr1 6680333 . A . PASS END=6680333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:29,0 chr1 6680334 . A . PASS END=6680334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr1 6680335 . A . PASS END=6680345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1041:0,71,255:26,0 chr1 6680346 . T . PASS END=6680348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 6680349 . C . PASS END=6680349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr1 6680350 . G . PASS END=6680356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 6680357 . G . PASS END=6680357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,944:0,73,255:28,0 chr1 6680358 . G . PASS END=6680369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1119:0,90,255:30,0 chr1 6680370 . A . PASS END=6680370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:26,0 chr1 6680371 . A . PASS END=6680376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6680377 . A . PASS END=6680377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:26,0 chr1 6680378 . G . PASS END=6680381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 6680382 . A . PASS END=6680382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 6680383 . T . PASS END=6680383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,826:0,53,255:27,0 chr1 6680384 . C . PASS END=6680384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 6680385 . A . PASS END=6680390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:27,0 chr1 6680391 . G . PASS END=6680391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:24,0 chr1 6680392 . A . PASS END=6680397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:25,0 chr1 6681471 . A . PASS END=6681493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,65,255:25,0 chr1 6681494 . A . PASS END=6681500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 6681501 . T . PASS END=6681501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 6681502 . C . PASS END=6681659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1215:0,84,255:40,0 chr1 6681660 . G . PASS END=6681660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:31,0 chr1 6681661 . C . PASS END=6681661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 6681662 . T . PASS END=6681662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:31,0 chr1 6681663 . C . PASS END=6681675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 6681676 . C . PASS END=6681683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,1033:0,63,255:26,0 chr1 6681684 . T . PASS END=6681687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:51:29:0,51,765:0,70,255:18,0 chr1 6681688 . C . PASS END=6681690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:20,0 chr1 6681691 . G . PASS END=6681697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:47:21:0,47,743:0,47,255:18,0 chr1 6685279 . A . PASS END=6685281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6685282 . C . PASS END=6685282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 6685283 . C . PASS END=6685284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6685285 . A . PASS END=6685285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 6685286 . A . PASS END=6685290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 6685291 . T . PASS END=6685291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 6685292 . G . PASS END=6685294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6685295 . C . PASS END=6685296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6685297 . G . PASS END=6685302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 6685303 . C . PASS END=6685305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,751:0,50,255:19,0 chr1 6685306 . T . PASS END=6685306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:19,0 chr1 6685307 . G . PASS END=6685313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 6685314 . C . PASS END=6685314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6685315 . C . PASS END=6685317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 6685318 . T . PASS END=6685331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:22,0 chr1 6685332 . G . PASS END=6685332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:21,0 chr1 6685333 . A . PASS END=6685335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 6685336 . C . PASS END=6685345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 6685346 . T . PASS END=6685346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:14,0 chr1 6685347 . C . PASS END=6685349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 6685350 . C . PASS END=6685352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 6688559 . G . PASS END=6688585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,488:0,42,255:19,0 chr1 6688586 . G . PASS END=6688590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 6688591 . A . PASS END=6688591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 6688592 . A . PASS END=6688598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:24,0 chr1 6688599 . C . PASS END=6688599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 6688600 . T . PASS END=6688602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 6688603 . A . PASS END=6688603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 6688604 . C . PASS END=6688604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 6688605 . A . PASS END=6688613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1023:0,84,255:29,0 chr1 6688614 . G . PASS END=6688618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 6688619 . C . PASS END=6688619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6688620 . T . PASS END=6688620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr1 6688621 . T . PASS END=6688631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 6688632 . C . PASS END=6688633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6688634 . G . PASS END=6688674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1072:0,84,255:31,0 chr1 6688675 . T . PASS END=6688675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 6688676 . C . PASS END=6688694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 6688695 . A . PASS END=6688695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 6688696 . A . PASS END=6688703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 6688704 . A . PASS END=6688704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:27,0 chr1 6688705 . A . PASS END=6688711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 6688712 . T . PASS END=6688712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 6688713 . G . PASS END=6688715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 6688716 . G . PASS END=6688716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr1 6688717 . T . PASS END=6688721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6688722 . A . PASS END=6688723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 6688724 . G . PASS END=6688724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6688725 . G . PASS END=6688735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:25,0 chr1 6688736 . T . PASS END=6688751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:19,0 chr1 6689703 . A . PASS END=6689703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 6689704 . A . PASS END=6689711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,529:0,48,255:16,0 chr1 6689712 . G . PASS END=6689712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 6689713 . A . PASS END=6689725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 6689726 . C . PASS END=6689726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 6689727 . C . PASS END=6689727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 6689728 . T . PASS END=6689728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 6689729 . T . PASS END=6689758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:17,0 chr1 6689759 . T . PASS END=6689759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 6689760 . G . PASS END=6689762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 6689763 . T . PASS END=6689763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 6689764 . G . PASS END=6689764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 6689765 . G . PASS END=6689765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 6689766 . C . PASS END=6689767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 6689768 . C . PASS END=6689784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 6690348 . C . PASS END=6690413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,108,1651:0,108,255:40,0 chr1 6692430 . A . PASS END=6692432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 6692433 . T . PASS END=6692436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6692437 . C . PASS END=6692437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 6692438 . C . PASS END=6692476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,45,255:19,0 chr1 6692477 . G . PASS END=6692506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,68,255:24,0 chr1 6692507 . A . PASS END=6692507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:20,0 chr1 6692508 . C . PASS END=6692510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 6692511 . G . PASS END=6692511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 6692512 . A . PASS END=6692541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,693:0,63,255:23,0 chr1 6692542 . G . PASS END=6692544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr1 6692545 . A . PASS END=6692545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6692546 . C . PASS END=6692546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:18,0 chr1 6692547 . G . PASS END=6692549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6692550 . A . PASS END=6692552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,65,255:19,0 chr1 6692553 . C . PASS END=6692555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6692571 . A . PASS END=6692590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 6692591 . A . PASS END=6692591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 6692592 . C . PASS END=6692594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 6692595 . G . PASS END=6692598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6692599 . A . PASS END=6692607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 6692608 . A . PASS END=6692608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 6692609 . A . PASS END=6692609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 6692610 . A . PASS END=6692611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 6692612 . A . PASS END=6692612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,654:0,24,255:20,0 chr1 6692613 . A . PASS END=6692614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 6692615 . A . PASS END=6692615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 6692616 . T . PASS END=6692616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6692617 . G . PASS END=6692627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr1 6692628 . A . PASS END=6692629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6692630 . C . PASS END=6692631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6692632 . C . PASS END=6692632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6692633 . C . PASS END=6692635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 6692636 . C . PASS END=6692638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6692639 . T . PASS END=6692639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 6692640 . G . PASS END=6692654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,892:0,72,255:25,0 chr1 6692655 . G . PASS END=6692656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 6692657 . G . PASS END=6692682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,799:0,66,255:24,0 chr1 6692683 . A . PASS END=6692683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 6692684 . G . PASS END=6692688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 6692689 . C . PASS END=6692689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 6692690 . C . PASS END=6692706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,709:0,63,255:24,0 chr1 6692707 . A . PASS END=6692707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 6692708 . T . PASS END=6692717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 6692718 . A . PASS END=6692718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:19,0 chr1 6692719 . C . PASS END=6692728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 6692729 . T . PASS END=6692729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 6692730 . T . PASS END=6692738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 6692739 . A . PASS END=6692739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 6692740 . G . PASS END=6692741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6692742 . C . PASS END=6692742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:20,0 chr1 6692743 . C . PASS END=6692754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6692755 . C . PASS END=6692756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6692757 . G . PASS END=6692774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 6692775 . G . PASS END=6692775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6692776 . T . PASS END=6692799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 6692800 . A . PASS END=6692800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 6692801 . T . PASS END=6692822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,853:0,69,255:23,0 chr1 6692856 . G . PASS END=6692856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6692857 . T . PASS END=6692857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr1 6692858 . C . PASS END=6692885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr1 6692886 . G . PASS END=6692886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 6692887 . C . PASS END=6692894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 6692895 . C . PASS END=6692898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 6692899 . C . PASS END=6692902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 6692903 . T . PASS END=6692906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 6692907 . C . PASS END=6692909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 6692910 . G . PASS END=6692933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:20,0 chr1 6692934 . A . PASS END=6692934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 6692935 . A . PASS END=6692945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,706:0,57,255:19,0 chr1 6692946 . G . PASS END=6692947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 6692948 . T . PASS END=6692952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 6692953 . G . PASS END=6692974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 6692975 . T . PASS END=6693007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 6693008 . G . PASS END=6693013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 6693014 . T . PASS END=6693025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 6693026 . G . PASS END=6693035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 6693036 . C . PASS END=6693068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 6693069 . A . PASS END=6693073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 6693074 . C . PASS END=6693079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6693080 . T . PASS END=6693081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 6693082 . C . PASS END=6693084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 6693085 . G . PASS END=6693093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 6693094 . A . PASS END=6693094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr1 6693095 . C . PASS END=6693099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 6693100 . G . PASS END=6693104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 6693105 . C . PASS END=6693108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 6693109 . C . PASS END=6693110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 6693111 . A . PASS END=6693137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 6694080 . G . PASS END=6694148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:40:0,87,1394:0,87,255:40,0 chr1 6694586 . T . PASS END=6694595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 6694596 . C . PASS END=6694600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:19,0 chr1 6694601 . G . PASS END=6694619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:23,0 chr1 6694620 . G . PASS END=6694620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr1 6694621 . T . PASS END=6694628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 6694629 . A . PASS END=6694629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:23,0 chr1 6694630 . G . PASS END=6694656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:26,0 chr1 6694657 . C . PASS END=6694663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,890:0,81,255:28,0 chr1 6694664 . A . PASS END=6694664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,857:0,67,255:27,0 chr1 6694665 . C . PASS END=6694722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:28:0,80,1025:0,80,255:34,0 chr1 6694723 . C . PASS END=6694742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:24:0,60,900:0,67,255:26,0 chr1 6694743 . G . PASS END=6694743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 6694744 . T . PASS END=6694754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,870:0,72,255:24,0 chr1 6694755 . A . PASS END=6694755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 6694756 . G . PASS END=6694773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 6694774 . G . PASS END=6694775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6694776 . T . PASS END=6694777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 6694778 . C . PASS END=6694783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 6694784 . A . PASS END=6694799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 6694800 . C . PASS END=6694812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 6694813 . G A, 3.34 DRAGENSnpHardQUAL DP=14;MQ=250.00;MQRankSum=2.100;ReadPosRankSum=-1.369;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,2,0:0.143,0.000:14:5,1,0:7,1,0:3:35,0,50,72,429,501:35,0,255:11,0:3.3386e+00,2.7051e+00,5.5705e+01,7.4225e+01,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,0,2:6,6,1,1 chr1 6694814 . G . PASS END=6694820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 6694821 . A . PASS END=6694826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:11:0,27,405:0,33,255:9,0 chr1 6694827 . G . PASS END=6694844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:6:0,15,225:0,18,210:6,0 chr1 6695735 . T . PASS END=6695760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,106,1800:0,106,255:40,0 chr1 6696177 . A . PASS END=6696294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1111:0,83,255:40,0 chr1 6696295 . A . PASS END=6696295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 6696296 . G . PASS END=6696306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1350:0,111,255:36,0 chr1 6697258 . C . PASS END=6697263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 6697264 . G . PASS END=6697265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 6697266 . C . PASS END=6697271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 6697272 . T . PASS END=6697272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 6697273 . G . PASS END=6697273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 6697274 . A . PASS END=6697274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 6697275 . G . PASS END=6697358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1003:0,80,255:33,0 chr1 6697359 . C . PASS END=6697359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 6697360 . A . PASS END=6697363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1034:0,90,255:30,0 chr1 6697364 . A . PASS END=6697364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 6697365 . C . PASS END=6697371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 6697372 . C . PASS END=6697372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 6697373 . C . PASS END=6697380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 6697381 . G . PASS END=6697400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,62,255:26,0 chr1 6697507 . C . PASS END=6697564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,103,1512:0,103,255:40,0 chr1 6698355 . A . PASS END=6698424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:32:0,92,1152:0,92,255:39,0 chr1 6699962 . T . PASS END=6699964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:26,0 chr1 6699965 . T . PASS END=6699965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,856:0,47,255:25,0 chr1 6699966 . C . PASS END=6699968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 6699969 . T . PASS END=6699969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 6699970 . C . PASS END=6699970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 6699971 . T . PASS END=6699982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 6699983 . T . PASS END=6699983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 6699984 . A . PASS END=6699986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:29,0 chr1 6699987 . G . PASS END=6699987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 6699988 . T . PASS END=6700079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:80:29:0,80,1011:0,80,255:40,0 chr1 6700080 . G . PASS END=6700080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1443:0,71,255:35,0 chr1 6700081 . A . PASS END=6700081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 6700082 . A . PASS END=6700099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1350:0,87,255:38,0 chr1 6700100 . T . PASS END=6700100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1380:0,68,255:27,0 chr1 6700101 . G . PASS END=6700103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1260:0,84,255:28,0 chr1 6700104 . T . PASS END=6700105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:57:40:0,57,855:0,59,255:24,0 chr1 6700106 . G . PASS END=6700106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:60:40:0,60,900:0,65,255:18,0 chr1 6700107 . C . PASS END=6700117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:51:37:0,51,765:0,62,255:19,0 chr1 6704618 . T . PASS END=6704627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 6704628 . G . PASS END=6704634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,920:0,84,255:28,0 chr1 6704635 . A G, 129.89 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,17,0:0,11,0:80:168,83,0,990,83,990:255,84,0:0,0:1.2989e+02,7.9894e+01,0.0000e+00,4.5000e+02,1.1466e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,15:0,0,16,12 chr1 6704636 . C . PASS END=6704637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 6704638 . C . PASS END=6704638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 6704639 . T . PASS END=6704658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:30:0,86,1210:0,86,255:36,0 chr1 6704659 . A . PASS END=6704659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:34,0 chr1 6704660 . G . PASS END=6704672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1297:0,95,255:37,0 chr1 6704673 . C . PASS END=6704722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1131:0,80,255:39,0 chr1 6704723 . A . PASS END=6704723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 6704724 . A . PASS END=6704725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 6704726 . A . PASS END=6704726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1001:0,51,255:26,0 chr1 6704727 . A . PASS END=6704727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6704728 . G . PASS END=6704728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 6704729 . C . PASS END=6704729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 6704730 . C . PASS END=6704734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 6705101 . T . PASS END=6705122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:37:0,94,1285:0,94,255:40,0 chr1 6705123 . T . PASS END=6705123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1418:0,79,255:40,0 chr1 6705124 . C . PASS END=6705186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:37:0,84,1352:0,84,255:40,0 chr1 6705849 . C . PASS END=6705868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,994:0,81,255:31,0 chr1 6705869 . G . PASS END=6705871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1091:0,60,255:29,0 chr1 6705872 . T . PASS END=6705877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1147:0,90,255:30,0 chr1 6705878 . T . PASS END=6705878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 6705879 . A . PASS END=6705924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1270:0,90,255:40,0 chr1 6705925 . C . PASS END=6705925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:34,0 chr1 6705926 . G . PASS END=6705997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1194:0,83,255:35,0 chr1 6705998 . C . PASS END=6706019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,856:0,61,255:26,0 chr1 6706020 . A . PASS END=6706020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,849:0,47,255:25,0 chr1 6706021 . C . PASS END=6706038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,676:0,61,255:23,0 chr1 6711077 . C . PASS END=6711090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 6711091 . A . PASS END=6711091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 6711092 . G . PASS END=6711092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 6711093 . A . PASS END=6711118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:24,0 chr1 6711119 . G . PASS END=6711197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:33:0,86,1210:0,86,255:40,0 chr1 6711198 . G . PASS END=6711198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:33,0 chr1 6711199 . G . PASS END=6711208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:34,0 chr1 6711209 . A . PASS END=6711209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,951:0,68,255:25,0 chr1 6711210 . T . PASS END=6711210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 6711211 . C . PASS END=6711211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:24,0 chr1 6711212 . A . PASS END=6711240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,887:0,68,255:26,0 chr1 6711589 . C . PASS END=6711662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:41:0,94,1446:0,94,255:40,0 chr1 6712889 . C . PASS END=6713011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:31:0,84,1194:0,93,255:40,0 chr1 6713971 . C . PASS END=6713971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 6713972 . T . PASS END=6713972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 6713973 . C . PASS END=6714099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1125:0,93,255:40,0 chr1 6727769 . C . PASS END=6727769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 6727770 . T . PASS END=6727790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 6727791 . A . PASS END=6727791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:23,0 chr1 6727792 . A . PASS END=6727793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 6727794 . C . PASS END=6727795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:28,0 chr1 6727796 . C . PASS END=6727797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:26,0 chr1 6727798 . T . PASS END=6727801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:27,0 chr1 6727802 . T . LowGQ END=6727804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:31:0,0,776:23,0,255:29,6 chr1 6727805 . T . PASS END=6727805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:34:32:0,34,1003:0,34,255:31,0 chr1 6727806 . C . PASS END=6727810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1123:0,80,255:31,0 chr1 6727811 . T . PASS END=6727811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 6727812 . C . PASS END=6727845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1272:0,92,255:36,0 chr1 6727846 . C . PASS END=6727870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1235:0,88,255:35,0 chr1 6738454 . C . PASS END=6738527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:37:0,99,1485:0,107,255:40,0 chr1 6740968 . C . PASS END=6740970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:27,0 chr1 6740971 . C . PASS END=6741069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,980:0,80,255:40,0 chr1 6741070 . A . PASS END=6741092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:29,0 chr1 6741093 . G . PASS END=6741095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 6741096 . G . PASS END=6741097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 6761789 . C . PASS END=6761800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:26,0 chr1 6761801 . G . PASS END=6761808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 6761809 . A . PASS END=6761828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,961:0,65,255:25,0 chr1 6761829 . T . PASS END=6761829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:23,0 chr1 6761830 . C . PASS END=6761834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 6761835 . T . PASS END=6761835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 6761836 . C . PASS END=6761846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 6761847 . A . PASS END=6761847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 6761848 . A . PASS END=6761858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 6761859 . A . PASS END=6761859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 6761860 . T . PASS END=6761860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 6845591 . A . LowGQ END=6845593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,192:0,0,201:7,0 chr1 6845594 . T . PASS END=6845594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 6845595 . G . PASS END=6845595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 6845596 . G . PASS END=6845619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 6845620 . G . PASS END=6845620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 6845621 . A . PASS END=6845622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 6845623 . A . PASS END=6845623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 6845624 . A . PASS END=6845631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 6845632 . G . PASS END=6845632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 6845633 . A . PASS END=6845635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:5,0 chr1 6867043 . G . PASS END=6867044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1329:0,111,255:37,0 chr1 6867045 . A . PASS END=6867048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1289:0,75,255:40,0 chr1 6867049 . G . PASS END=6867049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1590:0,94,255:40,0 chr1 6867050 . G . PASS END=6867050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1498:0,77,255:40,0 chr1 6867051 . A . PASS END=6867148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,112,1615:0,112,255:40,0 chr1 6880241 . A . PASS END=6880310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,122,255:40,0 chr1 6885152 . A . PASS END=6885270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:39:0,84,1266:0,84,255:40,0 chr1 6913112 . T . PASS END=6913249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,120,1800:0,121,255:40,0 chr1 6931817 . A . PASS END=6931825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,209,255:40,0 chr1 6946300 . G . PASS END=6946317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,146,255:40,0 chr1 6947714 . G . PASS END=6947785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:33:0,82,1066:0,82,255:40,0 chr1 7151364 . G . PASS END=7151431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:73:0,120,1800:0,183,255:40,0 chr1 7309551 . A . PASS END=7309686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:66:0,120,1800:0,182,255:40,0 chr1 7430142 . A . PASS END=7430247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1039:0,83,255:40,0 chr1 7430248 . C . PASS END=7430255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,990:0,77,255:25,0 chr1 7430256 . G . PASS END=7430256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:22,0 chr1 7430257 . C . PASS END=7430278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,866:0,72,255:26,0 chr1 7430279 . T . PASS END=7430280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,71,255:19,0 chr1 7430281 . T . PASS END=7430281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 7430282 . G . PASS END=7430300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 7527890 . T . PASS END=7527958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1227:0,81,255:40,0 chr1 7527959 . C . PASS END=7527961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 7682000 . C . PASS END=7682000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 7700459 . G . PASS END=7700459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 7700460 . A . PASS END=7700461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 7700462 . C . PASS END=7700462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 7700463 . C . PASS END=7700463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,986:0,13,255:26,0 chr1 7700464 . C . PASS END=7700464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:26,0 chr1 7700465 . C . PASS END=7700467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1147:0,77,255:27,0 chr1 7700468 . C . PASS END=7700468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 7700469 . A . PASS END=7700469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 7700470 . T . PASS END=7700470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 7700471 . C . PASS END=7700472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 7700473 . T . PASS END=7700473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr1 7700474 . C . PASS END=7700613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:30:0,87,1066:0,90,255:40,0 chr1 7700618 . G . PASS END=7700618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1350:0,123,255:30,0 chr1 7721786 . T . PASS END=7721906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:33:0,84,1260:0,95,255:40,0 chr1 7721907 . C . PASS END=7721907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1139:0,52,255:29,0 chr1 7721908 . C . PASS END=7721909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 7721910 . C . PASS END=7721911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1100:0,63,255:29,0 chr1 7721912 . G . PASS END=7721912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 7721913 . C . PASS END=7721914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1047:0,60,255:27,0 chr1 7721915 . C . PASS END=7721915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 7721916 . C . PASS END=7721926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,80,255:26,0 chr1 7723413 . G . PASS END=7723413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 7723414 . A . PASS END=7723414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 7723415 . G . PASS END=7723703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1186:0,83,255:40,0 chr1 7723704 . T . PASS END=7723704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr1 7723705 . C . PASS END=7723804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1156:0,83,255:35,0 chr1 7723805 . T . PASS END=7723805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:33,0 chr1 7723806 . T . PASS END=7723828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1271:0,89,255:34,0 chr1 7723829 . G . PASS END=7723831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 7723832 . G . PASS END=7723854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 7723855 . T . PASS END=7723857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr1 7723858 . C . PASS END=7723858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 7723859 . C . PASS END=7723884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 7723885 . C . PASS END=7723888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:18,0 chr1 7723889 . T . PASS END=7723896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 7723897 . C . PASS END=7723919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,676:0,43,255:19,0 chr1 7723920 . A . PASS END=7723956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 7723957 . G A, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=1.247;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:5,5,0:5,5,0:48:85,0,50,357,358,715:255,0,255:8,0:5.0000e+01,6.5233e-05,5.3000e+01,3.5740e+02,3.9237e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,3,7:4,6,8,2 chr1 7723958 . G . PASS END=7723962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 7723963 . C . PASS END=7723971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 7723972 . G . PASS END=7723994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,720:0,47,255:19,0 chr1 7723995 . A . PASS END=7724033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,615:0,41,255:17,0 chr1 7724034 . T . PASS END=7724034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 7724035 . T . PASS END=7724041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 7724042 . A . PASS END=7724042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 7724043 . C . PASS END=7724044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 7724045 . A . PASS END=7724048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 7724049 . T . PASS END=7724049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 7724050 . G . PASS END=7724050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7724051 . A . PASS END=7724074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,572:0,44,255:19,0 chr1 7724075 . A . PASS END=7724075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 7724076 . A . PASS END=7724089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,574:0,41,255:19,0 chr1 7724090 . G . PASS END=7724093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 7724094 . A . PASS END=7724094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 7724095 . G . PASS END=7724095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 7724096 . A . PASS END=7724096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:21,0 chr1 7724097 . C . PASS END=7724100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 7724101 . C . PASS END=7724111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 7724112 . G . PASS END=7724193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,762:0,63,255:26,0 chr1 7724194 . C . PASS END=7724194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:21,0 chr1 7724195 . A . PASS END=7724218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,809:0,66,255:24,0 chr1 7724219 . T . PASS END=7724219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 7724220 . C . PASS END=7724233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 7724234 . A . PASS END=7724234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 7724235 . T . PASS END=7724246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 7724247 . C . PASS END=7724247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr1 7724248 . G . PASS END=7724248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 7724249 . T . PASS END=7724301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,869:0,62,255:26,0 chr1 7724302 . C . PASS END=7724302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 7724303 . T . PASS END=7724309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 7724310 . T . PASS END=7724310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 7724311 . C . PASS END=7724326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 7724327 . G . PASS END=7724345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:19:0,45,675:0,46,255:18,0 chr1 7724346 . C . PASS END=7724371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,792:0,66,255:22,0 chr1 7724372 . A . PASS END=7724372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 7724373 . T . PASS END=7724387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 7724388 . A . PASS END=7724388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 7724389 . C . PASS END=7724410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 7724411 . A . PASS END=7724411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:19,0 chr1 7724412 . C . PASS END=7724412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 7724413 . G . PASS END=7724413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 7724414 . G . PASS END=7724414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:17,0 chr1 7724415 . G . PASS END=7724418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 7724419 . C . PASS END=7724419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 7724420 . A . PASS END=7724420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:20,0 chr1 7724421 . G . PASS END=7724422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 7724423 . C . PASS END=7724444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,609:0,43,255:19,0 chr1 7724445 . C . PASS END=7724449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 7724450 . A . PASS END=7724450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 7724451 . G . PASS END=7724459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,648:0,60,255:23,0 chr1 7724460 . T . PASS END=7724460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:22,0 chr1 7724461 . G . PASS END=7724461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 7724462 . C . PASS END=7724463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 7724464 . G . PASS END=7724464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 7724465 . G . PASS END=7724465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 7724466 . A . PASS END=7724469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 7724470 . C . PASS END=7724470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 7724471 . A . PASS END=7724471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr1 7724472 . G . PASS END=7724479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,803:0,68,255:23,0 chr1 7724480 . C . PASS END=7724480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 7724481 . T . PASS END=7724481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,662:0,36,255:19,0 chr1 7724482 . C . PASS END=7724484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 7724485 . C . PASS END=7724488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,723:0,49,255:19,0 chr1 7724489 . G . PASS END=7724489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr1 7724490 . A . PASS END=7724490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 7724491 . G . PASS END=7724494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 7724495 . A . PASS END=7724495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,790:0,6,255:20,0 chr1 7724496 . A . PASS END=7724533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,64,255:25,0 chr1 7724534 . G . PASS END=7724555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,660:0,54,255:19,0 chr1 7724556 . A . PASS END=7724560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 7724561 . T . PASS END=7724563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 7724564 . T . PASS END=7724575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 7724576 . T . PASS END=7724577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:21,0 chr1 7724578 . C . PASS END=7724578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 7724579 . T . PASS END=7724579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 7724580 . G . PASS END=7724600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,884:0,66,255:23,0 chr1 7724601 . G . PASS END=7724601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:21,0 chr1 7724602 . G . PASS END=7724619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,864:0,69,255:26,0 chr1 7724620 . C . PASS END=7724621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 7724622 . T . PASS END=7724625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 7724626 . C . PASS END=7724627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 7724628 . T . PASS END=7724644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,892:0,69,255:26,0 chr1 7724645 . A . PASS END=7724645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 7724646 . A . PASS END=7724655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,821:0,69,255:23,0 chr1 7724656 . C . PASS END=7724657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:19,0 chr1 7724658 . T . PASS END=7724674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 7724675 . G . PASS END=7724675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 7724676 . T . PASS END=7724685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 7724686 . G . PASS END=7724686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr1 7724687 . A . PASS END=7724692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7724693 . C . PASS END=7724723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 7724724 . A . PASS END=7724724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:13,0 chr1 7724725 . G . PASS END=7724798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:14:0,40,512:0,40,255:19,0 chr1 7724799 . G . PASS END=7724799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 7724800 . C . PASS END=7724848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:18,0 chr1 7724849 . G . PASS END=7724852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7724853 . A . PASS END=7724853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 7724854 . G . PASS END=7724879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,784:0,66,255:22,0 chr1 7724880 . T . PASS END=7724880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 7724881 . G . PASS END=7724894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 7724895 . A . PASS END=7724898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 7724899 . C . PASS END=7724906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 7724907 . T . PASS END=7724916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 7724917 . C . PASS END=7724922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7724923 . G . PASS END=7724923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 7724924 . T . PASS END=7724932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 7724933 . C . PASS END=7724933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 7724934 . T . PASS END=7724934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 7724935 . G . PASS END=7724939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 7724940 . A . PASS END=7724940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 7724941 . C . PASS END=7724945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 7724946 . T . PASS END=7724950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 7724951 . T . PASS END=7724962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:22,0 chr1 7724963 . G . PASS END=7724964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 7724965 . C . PASS END=7724972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 7724973 . C . PASS END=7724973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 7724974 . C . PASS END=7724987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 7724988 . A . PASS END=7724989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 7724990 . C . PASS END=7724990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7724991 . T . PASS END=7725019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,706:0,44,255:19,0 chr1 7725020 . C . PASS END=7725020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7725021 . A . PASS END=7725021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 7725022 . G . PASS END=7725025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7725026 . G . PASS END=7725027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 7725028 . G . PASS END=7725029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 7725030 . A . PASS END=7725032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 7725033 . G . PASS END=7725037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 7725038 . C . PASS END=7725066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,47,255:19,0 chr1 7725067 . C . PASS END=7725067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr1 7725068 . C . PASS END=7725080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,474:0,39,255:13,0 chr1 7725081 . G . PASS END=7725104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 7725105 . T . PASS END=7725115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 7725116 . G . PASS END=7725121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 7725122 . G . PASS END=7725123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 7725124 . G . PASS END=7725161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 7725162 . T . PASS END=7725162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:13,0 chr1 7725163 . C . PASS END=7725173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr1 7725174 . C . PASS END=7725174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 7725175 . G . PASS END=7725194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 7725195 . T . PASS END=7725197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 7725198 . T . PASS END=7725200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 7725201 . A . PASS END=7725224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,722:0,63,255:21,0 chr1 7725225 . T . PASS END=7725225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 7725226 . G . PASS END=7725226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7725227 . A . PASS END=7725244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:19,0 chr1 7725245 . T . PASS END=7725246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 7725247 . G . PASS END=7725259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr1 7730971 . G . PASS END=7730973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr1 7730974 . G . PASS END=7730989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:26,0 chr1 7730990 . T . PASS END=7731032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:32,0 chr1 7731033 . G . PASS END=7731033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 7731034 . T . PASS END=7731074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 7731075 . G . PASS END=7731091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 7731092 . G . PASS END=7731092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 7731093 . C . PASS END=7731093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 7731094 . C . PASS END=7731097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 7732125 . A . PASS END=7732156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:32,0 chr1 7732157 . G . PASS END=7732159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 7732160 . G . PASS END=7732160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 7732161 . G . PASS END=7732164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 7737659 . C . PASS END=7737662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 7737663 . T . PASS END=7737663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 7737664 . G . PASS END=7737664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 7737665 . A . PASS END=7737687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:30,0 chr1 7737688 . G . PASS END=7737688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 7737689 . T . PASS END=7737689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,984:0,43,255:28,0 chr1 7737690 . T . PASS END=7737711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1072:0,90,255:31,0 chr1 7737712 . T . PASS END=7737712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 7737713 . C . PASS END=7737713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 7737714 . C . PASS END=7737714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 7737715 . A . PASS END=7737722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1094:0,90,255:30,0 chr1 7737723 . G . PASS END=7737746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:25:0,66,990:0,71,255:25,0 chr1 7737747 . T . PASS END=7737747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:24:25:0,24,528:0,24,255:19,0 chr1 7737748 . C . PASS END=7737748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 7737749 . T . PASS END=7737749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 7737750 . G . PASS END=7737755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 7737756 . G . PASS END=7737761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 7737762 . T . PASS END=7737786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 7737787 . T . PASS END=7737787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 7737788 . T . PASS END=7737791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 7737792 . C . PASS END=7737793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 7740233 . A . PASS END=7740238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:24,0 chr1 7740239 . T . PASS END=7740239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:23,0 chr1 7740240 . T . PASS END=7740252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,856:0,72,255:24,0 chr1 7740253 . A . PASS END=7740253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 7740254 . A . PASS END=7740262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,937:0,65,255:24,0 chr1 7740263 . T . PASS END=7740263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,793:0,36,255:22,0 chr1 7740264 . G . PASS END=7740264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 7740265 . G . PASS END=7740274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 7740275 . G . PASS END=7740275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 7766252 . G . PASS END=7766271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,115,1800:0,115,255:40,0 chr1 7774224 . T . PASS END=7774246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:77:0,120,1800:0,201,255:40,0 chr1 7792508 . A . PASS END=7792509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,668:0,57,255:19,0 chr1 7792510 . A . PASS END=7792511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 7792512 . C . PASS END=7792512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 7792513 . C . PASS END=7792523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,821:0,66,255:26,0 chr1 7792524 . G . PASS END=7792524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 7792525 . T . PASS END=7792526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 7792527 . C . PASS END=7792528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:29,0 chr1 7792529 . T . PASS END=7792529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 7792530 . C . PASS END=7792535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr1 7792536 . A . PASS END=7792536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 7792537 . C . PASS END=7792646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1133:0,80,255:40,0 chr1 7792647 . G . PASS END=7792659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr1 7796404 . T . PASS END=7796575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1215:0,89,255:40,0 chr1 7796576 . T . PASS END=7796593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:26,0 chr1 7796594 . A . PASS END=7796594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,778:0,41,255:21,0 chr1 7796595 . A . PASS END=7796595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 7796596 . T . PASS END=7796596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:19,0 chr1 7796597 . G . PASS END=7796600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 7796991 . T . PASS END=7797069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,121,255:40,0 chr1 7797315 . A . PASS END=7797317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 7797318 . T . PASS END=7797323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 7797324 . T . PASS END=7797330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 7797331 . T . PASS END=7797331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 7797332 . A . PASS END=7797343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 7797344 . A . PASS END=7797344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 7797345 . G . PASS END=7797351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 7797352 . T . PASS END=7797353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 7797354 . G . PASS END=7797356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 7797357 . C . PASS END=7797363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 7797364 . A . PASS END=7797412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,598:0,44,255:19,0 chr1 7797413 . T . PASS END=7797424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 7797425 . C . PASS END=7797427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 7797428 . G . PASS END=7797428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 7797429 . T . PASS END=7797429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 7797430 . C . PASS END=7797430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 7797431 . A . PASS END=7797431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 7797432 . C . PASS END=7797443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,892:0,69,255:24,0 chr1 7797444 . A . PASS END=7797444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 7797445 . A . PASS END=7797448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 7797449 . A . PASS END=7797449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 7797450 . G . PASS END=7797485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 7797486 . G . PASS END=7797487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 7797488 . T . PASS END=7797495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:24,0 chr1 7797496 . G . PASS END=7797496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 7797497 . A . PASS END=7797511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,870:0,61,255:24,0 chr1 7797512 . C . PASS END=7797512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 7797513 . C . PASS END=7797522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:23,0 chr1 7797523 . C . PASS END=7797524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 7797525 . A . PASS END=7797545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 7797546 . A . PASS END=7797546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 7797547 . G . PASS END=7797570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:23,0 chr1 7797571 . A . PASS END=7797572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:21,0 chr1 7797573 . G . PASS END=7797575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 7797576 . A . PASS END=7797576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:19,0 chr1 7797577 . T . PASS END=7797583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 7797584 . T . PASS END=7797591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 7797592 . T . PASS END=7797592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:18,0 chr1 7797593 . A . PASS END=7797608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,615:0,40,255:17,0 chr1 7797609 . G . PASS END=7797609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 7797610 . T . PASS END=7797613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 7797614 . T . PASS END=7797614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 7797615 . G . PASS END=7797624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr1 7797625 . A . PASS END=7797625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 7797626 . C . PASS END=7797630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 7798019 . A . PASS END=7798019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 7798020 . G . PASS END=7798020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 7798021 . C . PASS END=7798029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,740:0,69,255:24,0 chr1 7798030 . C . PASS END=7798030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 7798031 . C . PASS END=7798033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 7798034 . G . PASS END=7798044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:30,0 chr1 7798045 . T . PASS END=7798045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 7798046 . C . PASS END=7798109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1073:0,82,255:34,0 chr1 7798110 . T . PASS END=7798110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 7798111 . G . PASS END=7798130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1119:0,80,255:31,0 chr1 7798131 . G . PASS END=7798132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1078:0,77,255:26,0 chr1 7798133 . A . PASS END=7798133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 7798134 . G . PASS END=7798140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:26,0 chr1 7798141 . C . PASS END=7798141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 7798142 . T . PASS END=7798153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,68,255:26,0 chr1 7798154 . T . PASS END=7798154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:20,0 chr1 7798155 . G . PASS END=7798157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,65,255:21,0 chr1 7798158 . T . PASS END=7798158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:20,0 chr1 7798159 . C . PASS END=7798159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 7798160 . T . PASS END=7798160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 7798161 . G . PASS END=7798161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 7798162 . G . PASS END=7798162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 7798163 . A . PASS END=7798165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 7798166 . A . PASS END=7798166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,670:0,27,255:20,0 chr1 7798167 . G . PASS END=7798167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 7798168 . C . PASS END=7798172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 7798173 . T . PASS END=7798173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:19,0 chr1 7798174 . A . PASS END=7798178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 7798179 . G . PASS END=7798179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 7798180 . A . PASS END=7798192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,47,255:19,0 chr1 7798193 . G . PASS END=7798206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:21,0 chr1 7798207 . G . PASS END=7798209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 7798210 . C . PASS END=7798220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 7798221 . C . PASS END=7798221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 7798222 . A . PASS END=7798243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr1 7798244 . A . PASS END=7798269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:30,0 chr1 7798270 . A . PASS END=7798270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 7798271 . C . PASS END=7798294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,978:0,93,255:32,0 chr1 7798295 . C . PASS END=7798295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 7798296 . C . PASS END=7798298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 7798299 . T . PASS END=7798299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 7798300 . G . PASS END=7798325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1120:0,85,255:34,0 chr1 7798326 . T . PASS END=7798326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1122:0,52,255:30,0 chr1 7798327 . T . PASS END=7798334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 7798335 . T . PASS END=7798335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:27,0 chr1 7798336 . C . PASS END=7798540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1105:0,82,255:40,0 chr1 7798541 . A . PASS END=7798542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 7804894 . G . PASS END=7804897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 7804898 . A . PASS END=7804898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 7804899 . A . PASS END=7804899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 7804900 . C . PASS END=7804900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 7804901 . A . PASS END=7804901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:27,0 chr1 7804902 . T . PASS END=7804904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 7804905 . T . PASS END=7804906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 7804907 . A . PASS END=7805082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1215:0,87,255:40,0 chr1 7805905 . A . PASS END=7806092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1127:0,86,255:40,0 chr1 7806093 . A . PASS END=7806093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 7806094 . A . PASS END=7806094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 7806095 . C . PASS END=7806095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 7806096 . A . PASS END=7806109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 7806110 . G . PASS END=7806128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,630:0,41,255:19,0 chr1 7806129 . A . PASS END=7806151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr1 7807770 . G . PASS END=7807841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,111,1562:0,113,255:40,0 chr1 7809831 . C . PASS END=7809851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:81:0,120,1800:0,205,255:40,0 chr1 7811259 . T . PASS END=7811285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 7811286 . G . PASS END=7811288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 7811289 . G . PASS END=7811289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 7811290 . C . PASS END=7811327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1149:0,82,255:32,0 chr1 7811328 . C . PASS END=7811328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,2 chr1 7811329 . A . PASS END=7811329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1149:0,33,255:31,2 chr1 7811330 . A . PASS END=7811330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 7811331 . A . PASS END=7811397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1156:0,88,255:33,0 chr1 7811398 . G . PASS END=7811398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:26,0 chr1 7811399 . T . PASS END=7811411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,89,255:33,0 chr1 7811412 . C . PASS END=7811412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 7811413 . A . PASS END=7811418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 7811419 . G . PASS END=7811419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:30,0 chr1 7811420 . C . PASS END=7811431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 7811432 . G . PASS END=7811445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:25,0 chr1 7811446 . A . PASS END=7811447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 7811448 . C . PASS END=7811452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 7812519 . G . PASS END=7812593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,117,1755:0,125,255:40,0 chr1 7815698 . C . PASS END=7815728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,147,255:40,0 chr1 7820663 . G . PASS END=7820669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,245,255:40,0 chr1 7826519 . A . PASS END=7826582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,166,255:40,0 chr1 7831444 . A . PASS END=7831445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 7833502 . G . PASS END=7833522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,134,255:40,0 chr1 7833523 . C . PASS END=7833571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,148,255:40,0 chr1 7837220 . G . PASS END=7837224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 7837225 . G . PASS END=7837225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 7837226 . G . PASS END=7837230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,846:0,69,255:24,0 chr1 7837231 . A . PASS END=7837231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 7837232 . A . PASS END=7837252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,832:0,61,255:26,0 chr1 7837253 . G . PASS END=7837263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 7837264 . A . PASS END=7837265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 7837266 . A . PASS END=7837276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 7837277 . T . PASS END=7837304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,909:0,65,255:25,0 chr1 7837305 . T . PASS END=7837308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr1 7837309 . G . PASS END=7837326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,755:0,69,255:23,0 chr1 7837327 . T . PASS END=7837327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,727:0,36,255:21,0 chr1 7837328 . G . PASS END=7837333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 7837334 . A . PASS END=7837334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 7837335 . G . PASS END=7837336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 7837337 . G . PASS END=7837337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:20,0 chr1 7837338 . C . PASS END=7837351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:18,0 chr1 7837352 . A . PASS END=7837362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 7837363 . G . PASS END=7837363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 7837364 . T . PASS END=7837364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 7837365 . G . PASS END=7837365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 7837366 . G . PASS END=7837375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 7837376 . A . PASS END=7837378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:9,0 chr1 7838178 . A . PASS END=7838315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:46:0,100,1690:0,100,255:40,2 chr1 7839686 . T . PASS END=7839705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:55:0,82,1800:0,82,255:40,0 chr1 7844938 . A . PASS END=7844939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:68:23:0,68,689:0,68,255:23,0 chr1 7844940 . G . PASS END=7844940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 7844941 . C . PASS END=7844953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:25,0 chr1 7844954 . C . PASS END=7844957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 7844958 . T . PASS END=7844958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 7844959 . G . PASS END=7844963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 7844964 . C . PASS END=7844965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 7844966 . G . PASS END=7844969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 7844970 . A . PASS END=7844970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 7844971 . C . PASS END=7844975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 7844976 . G . PASS END=7844976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 7844977 . G . PASS END=7845039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1219:0,86,255:37,0 chr1 7845040 . A . PASS END=7845040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 7845041 . G . PASS END=7845062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1215:0,89,255:33,0 chr1 7845063 . C . PASS END=7845065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,105,255:26,0 chr1 7845501 . T . PASS END=7845632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:36:0,81,1215:0,98,255:40,0 chr1 7845633 . C . PASS END=7845634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 7845635 . A . PASS END=7845635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:26,0 chr1 7845636 . C . PASS END=7845646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,990:0,70,255:25,0 chr1 7846781 . C . PASS END=7846896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,102,1618:0,102,255:40,0 chr1 7848105 . G . PASS END=7848106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 7848107 . T . PASS END=7848107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,813:0,58,255:24,0 chr1 7848108 . A . PASS END=7848108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 7848109 . C . PASS END=7848282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,906:0,84,255:40,0 chr1 7848283 . T . PASS END=7848283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 7848284 . C . PASS END=7848287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 7848288 . A . PASS END=7848298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:26,0 chr1 7848299 . C . PASS END=7848306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:24:0,48,720:0,56,255:19,0 chr1 7854017 . C . PASS END=7854020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 7854021 . T . PASS END=7854021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 7854022 . G . PASS END=7854026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1131:0,80,255:29,0 chr1 7854027 . G . PASS END=7854027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:32,0 chr1 7854028 . T . PASS END=7854050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:34:0,80,1158:0,80,255:34,0 chr1 7854051 . T . PASS END=7854051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:32,0 chr1 7854052 . T . PASS END=7854068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 7858585 . T . PASS END=7858597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1306:0,87,255:38,0 chr1 7858598 . A . PASS END=7858598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1268:0,75,255:37,0 chr1 7858599 . G . PASS END=7858714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:36:0,91,1264:0,91,255:40,0 chr1 7858715 . A . PASS END=7858715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:32,0 chr1 7858716 . T . PASS END=7858725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1186:0,86,255:33,0 chr1 7858726 . T . PASS END=7858729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 7858730 . G . PASS END=7858730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 7858731 . A . PASS END=7858731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:26,0 chr1 7858732 . A . PASS END=7858733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 7861173 . C . PASS END=7861174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 7861175 . C . PASS END=7861175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:34,0 chr1 7861176 . C . PASS END=7861203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1349:0,95,255:38,0 chr1 7861204 . C . PASS END=7861220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:39:0,81,1215:0,110,255:38,0 chr1 7861221 . C . PASS END=7861244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 7861245 . A . PASS END=7861251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 7863107 . A . PASS END=7863213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,102,1421:0,104,255:40,0 chr1 7863752 . T . PASS END=7863752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:24,0 chr1 7863753 . T . PASS END=7863753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:23,0 chr1 7863754 . T . PASS END=7863758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,840:0,61,255:25,0 chr1 7863759 . G . PASS END=7863759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 7863760 . T . PASS END=7863760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 7863761 . A . PASS END=7863763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:32,0 chr1 7863764 . C . PASS END=7863764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1080:0,44,255:31,0 chr1 7863765 . A . PASS END=7863765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:32,0 chr1 7863766 . G . PASS END=7863912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:35:0,84,1241:0,84,255:40,0 chr1 7868953 . G . PASS END=7869058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:82:0,120,1800:0,232,255:40,1 chr1 7869953 . C . PASS END=7869958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 7869959 . C . PASS END=7869959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 7869960 . A . PASS END=7869964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,954:0,78,255:26,0 chr1 7869965 . A . PASS END=7870010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1102:0,83,255:37,0 chr1 7870011 . A . PASS END=7870043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:33,0 chr1 7870044 . C . PASS END=7870047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1131:0,77,255:26,0 chr1 7870048 . T C, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,16,0:0,14,0:87:175,90,0,1163,90,1163:255,90,0:0,0:1.3729e+02,8.7292e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,16:0,0,16,14 chr1 7870049 . G . PASS END=7870060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,68,255:26,0 chr1 7870061 . G . PASS END=7870081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,659:0,41,255:19,0 chr1 7870498 . A . PASS END=7870500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,952:0,68,255:26,0 chr1 7870501 . A . PASS END=7870648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:31:0,80,1169:0,80,255:40,0 chr1 7879345 . G . PASS END=7879359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:98:37:0,98,1329:0,98,255:40,0 chr1 7879360 . T . PASS END=7879480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,111,1665:0,122,255:40,0 chr1 7880175 . A . PASS END=7880299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,120,1800:0,135,255:40,0 chr1 7880527 . C . PASS END=7880527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 7880528 . T . PASS END=7880528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 7880529 . G . PASS END=7880557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1097:0,86,255:36,0 chr1 7880558 . A . PASS END=7880558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 7880559 . G . PASS END=7880600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:85:34:0,85,1156:0,85,255:40,0 chr1 7880601 . G . PASS END=7880601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1373:0,74,255:40,0 chr1 7880602 . C . PASS END=7880698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1260:0,89,255:40,0 chr1 7880699 . A . PASS END=7880700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 7886540 . C . PASS END=7886547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:20,0 chr1 7886548 . G . PASS END=7886557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 7886558 . T . PASS END=7886563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:30,0 chr1 7886564 . A . PASS END=7886564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 7886565 . G . PASS END=7886770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:30:0,83,1119:0,83,255:40,0 chr1 7887178 . G . PASS END=7887192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,466:0,42,255:15,0 chr1 7887193 . A . PASS END=7887193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 7887194 . G . PASS END=7887210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr1 7887211 . G . PASS END=7887211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 7887212 . C . PASS END=7887218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:16,0 chr1 7887219 . A . PASS END=7887219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 7887220 . A . PASS END=7887272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,668:0,44,255:19,0 chr1 7887273 . A . PASS END=7887276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7887277 . C . PASS END=7887279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 7887280 . G . PASS END=7887281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 7887282 . T . PASS END=7887296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr1 7887297 . G . PASS END=7887299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:20,0 chr1 7887300 . G . PASS END=7887302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 7887303 . C . PASS END=7887347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:26,0 chr1 7887348 . C . PASS END=7887348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 7887349 . A . PASS END=7887351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 7887352 . C . PASS END=7887377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:31,0 chr1 7887378 . G . PASS END=7887378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 7887379 . C . PASS END=7887379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 7887380 . C . PASS END=7887380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 7887381 . A . PASS END=7887429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1064:0,84,255:31,0 chr1 7887430 . C . PASS END=7887434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 7887435 . A . PASS END=7887442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1062:0,84,255:28,0 chr1 7887443 . C . PASS END=7887447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 7887448 . G . PASS END=7887455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 7887456 . G . PASS END=7887456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 7887457 . C . PASS END=7887478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:32,0 chr1 7887479 . A . PASS END=7887479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 7887480 . G . PASS END=7887492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:30,0 chr1 7887493 . T C, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,14,0:0,21,0:102:190,105,0,1354,105,1354:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,17:0,0,17,18 chr1 7887494 . G . PASS END=7887505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,99,1485:0,107,255:37,0 chr1 7887506 . G . PASS END=7887506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 7887507 . G . PASS END=7887533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1363:0,95,255:37,0 chr1 7887534 . T . PASS END=7887538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 7887539 . T . PASS END=7887578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1247:0,89,255:38,0 chr1 7887579 . C G, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=1.527;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,21,0:0.553,0.000:38:9,11,0:8,10,0:48:85,0,49,742,608,1350:255,0,255:17,0:5.0000e+01,7.0410e-05,5.2087e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,11,10:8,9,9,12 chr1 7887580 . C . PASS END=7887616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1274:0,94,255:38,0 chr1 7887617 . T . PASS END=7887645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:39:0,85,1382:0,85,255:39,0 chr1 7887646 . C . PASS END=7887646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:35,0 chr1 7887647 . G . PASS END=7887828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:33:0,81,1215:0,84,255:40,0 chr1 7887829 . A . PASS END=7887844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:26:0,71,1024:0,71,255:26,0 chr1 7887845 . G . PASS END=7887845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 7887846 . A . PASS END=7887875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr1 7889894 . C . PASS END=7889897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,853:0,69,255:26,0 chr1 7889898 . G . PASS END=7889906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 7889907 . G . PASS END=7889907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 7889908 . C . PASS END=7889982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:82:30:0,82,1081:0,82,255:40,0 chr1 7889983 . C . PASS END=7890009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,122,255:40,0 chr1 7890010 . A . LowGQ END=7890010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:0:54:0,0,1593:32,0,255:40,0 chr1 7890011 . G . PASS END=7890012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,121,255:40,0 chr1 7890013 . A . LowGQ END=7890013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:0:50:0,0,1390:60,0,255:40,0 chr1 7890014 . T . PASS END=7890015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 7890016 . G . LowGQ END=7890016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:0:50:0,0,1543:35,0,255:40,0 chr1 7890017 . C . PASS END=7890023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,150,255:40,0 chr1 7890024 . T . LowGQ END=7890024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:0:54:0,0,1629:32,0,255:40,0 chr1 7890025 . G . PASS END=7890025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 7890026 . A . LowGQ END=7890026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,6:54:0:54:0,0,1588:70,0,255:40,0 chr1 7890027 . A . PASS END=7890052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,152,255:40,0 chr1 7890053 . G . LowGQ END=7890053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,11:58:0:58:0,0,1313:252,0,255:40,0 chr1 7890054 . C . PASS END=7890054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 7890055 . T . LowGQ END=7890055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,11:58:0:58:0,0,1244:230,0,255:40,0 chr1 7890056 . C . PASS END=7890063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,135,255:40,0 chr1 7890064 . A G, 50.00 PASS DP=63;MQ=185.31;MQRankSum=1.652;ReadPosRankSum=2.256;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,36,0:0.600,0.000:60:14,19,0:10,17,0:46:85,0,45,185,185,185:255,0,255:19,0:5.0000e+01,1.1338e-04,4.7923e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,15,22,14:11,13,21,15 chr1 7890065 . G . PASS END=7890068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,180,255:40,0 chr1 7890069 . C . LowGQ END=7890069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:0:59:0,0,1855:8,0,255:40,0 chr1 7890070 . G . PASS END=7890077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,171,255:40,0 chr1 7890078 . T . LowGQ END=7890078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:0:57:0,0,1812:0,0,255:40,0 chr1 7890079 . G . PASS END=7890079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:16:57:0,16,1861:0,16,255:40,0 chr1 7890080 . A . PASS END=7890080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,169,255:40,0 chr1 7890081 . A . PASS END=7890081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:52:56:0,52,1864:0,52,255:40,0 chr1 7890082 . G . PASS END=7890116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,116,1800:0,116,255:40,0 chr1 7890117 . T C, 50.00 PASS DP=61;MQ=218.31;MQRankSum=1.464;ReadPosRankSum=-0.353;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,31,0:0.508,0.000:61:17,13,0:13,18,0:48:85,0,50,1109,1044,2152:255,0,255:28,0:5.0000e+01,6.5492e-05,5.2963e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,13,18:17,13,15,16 chr1 7890118 . G . PASS END=7890154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,167,255:40,0 chr1 7890155 . G . PASS END=7890221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1260:0,94,255:40,0 chr1 7895822 . G . PASS END=7895825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 7895826 . C . PASS END=7895826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:30,0 chr1 7895827 . A . PASS END=7895830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:33,0 chr1 7895831 . A . PASS END=7895831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:32,0 chr1 7895832 . C . PASS END=7895983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:81:36:0,81,1215:0,108,255:40,0 chr1 7895984 . T . PASS END=7895986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:75:45:0,75,1125:0,97,255:26,0 chr1 7895987 . C . PASS END=7895989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1215:0,98,255:29,0 chr1 7895990 . A . PASS END=7895999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,81,255:26,0 chr1 7896000 . T . PASS END=7896000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,909:0,57,255:21,0 chr1 7896001 . G . PASS END=7896005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:22,0 chr1 7897059 . G . PASS END=7897190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:45:0,115,1800:0,115,255:40,0 chr1 7897191 . T . PASS END=7897209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,105,1549:0,110,255:40,0 chr1 7902686 . G . PASS END=7902806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1045:0,85,255:40,0 chr1 7902807 . A . PASS END=7902807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:27,0 chr1 7902808 . G . PASS END=7902809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1119:0,60,255:28,0 chr1 7902810 . T . PASS END=7902815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 7904003 . T . PASS END=7904010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,207,255:40,0 chr1 7906741 . T . PASS END=7906826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:78:0,120,1800:0,220,255:40,0 chr1 7907826 . T . PASS END=7907848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,122,255:40,0 chr1 7907849 . A . PASS END=7907942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,111,1665:0,124,255:40,0 chr1 7909700 . C . PASS END=7909743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:77:0,120,1800:0,198,255:40,0 chr1 7910872 . C . PASS END=7910976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1215:0,81,255:40,0 chr1 7910977 . G . PASS END=7910982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:34:0,60,900:0,102,255:21,0 chr1 7912961 . C . PASS END=7913063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,111,1546:0,111,255:40,0 chr1 7913367 . A . PASS END=7913392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,103,1660:0,103,255:40,0 chr1 7913393 . G . PASS END=7913429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,143,255:40,0 chr1 7913430 . G A, 50.00 PASS DP=69;MQ=249.34;MQRankSum=7.099;ReadPosRankSum=5.374;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,38,0:0.551,0.000:69:14,23,0:17,15,0:48:85,0,49,1322,1093,2415:255,0,255:27,0:5.0000e+01,6.9893e-05,5.2161e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,19,20,18:13,18,15,23 chr1 7913431 . T . PASS END=7913467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,117,1755:0,134,255:40,0 chr1 7913468 . A . PASS END=7913491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1450:0,104,255:40,0 chr1 7980895 . T . PASS END=7980959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:94:44:0,94,1485:0,94,255:40,0 chr1 7980960 . T . PASS END=7980960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1498:0,77,255:31,0 chr1 7980961 . A . PASS END=7980968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:43:0,81,1215:0,113,255:29,0 chr1 7980969 . C . PASS END=7980972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:32:0,72,1080:0,80,255:25,0 chr1 7980973 . T . PASS END=7980973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:23,0 chr1 7980974 . C . PASS END=7980981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,838:0,61,255:24,0 chr1 7980982 . T . PASS END=7980982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr1 7980983 . G . PASS END=7980983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,829:0,23,255:22,0 chr1 7982041 . T . PASS END=7982081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,137,255:40,0 chr1 7993222 . G . PASS END=7993226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 7993227 . T . PASS END=7993229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:29,0 chr1 7993230 . A . PASS END=7993230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 7993231 . A . PASS END=7993231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 7993232 . T . PASS END=7993356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:31:0,86,1157:0,86,255:40,0 chr1 7995073 . C . PASS END=7995086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 7995087 . G . PASS END=7995089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 7995090 . G . PASS END=7995096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 7995097 . G . PASS END=7995156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1162:0,83,255:33,0 chr1 7995157 . T . PASS END=7995198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,776:0,66,255:26,0 chr1 7995199 . A . PASS END=7995202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:14,0 chr1 7995203 . G . PASS END=7995203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:39:22:0,39,585:0,49,255:13,0 chr1 7996575 . T . PASS END=7996596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,102,1551:0,102,255:40,0 chr1 7996597 . T . PASS END=7996623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:47:0,90,1350:0,114,255:40,0 chr1 7997750 . T . PASS END=7997816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,171,255:40,0 chr1 7998253 . C . PASS END=7998253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr1 7998254 . T . PASS END=7998254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 7998255 . T . PASS END=7998255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 7998256 . T . PASS END=7998257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 7998258 . T . PASS END=7998258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 7998259 . T . PASS END=7998260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 7998261 . G . PASS END=7998261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 7998262 . T . PASS END=7998263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 7998264 . A . PASS END=7998264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:19,0 chr1 7998265 . G . PASS END=7998268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,915:0,64,255:24,0 chr1 7998269 . T . PASS END=7998269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,877:0,34,255:20,0 chr1 7998270 . T . PASS END=7998285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,917:0,75,255:26,0 chr1 7998286 . C . PASS END=7998290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:31,0 chr1 7998291 . T . PASS END=7998291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 7998292 . C . PASS END=7998367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1170:0,93,255:39,0 chr1 7998368 . C . PASS END=7998383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:25,0 chr1 7998384 . A . PASS END=7998390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr1 7998781 . C . PASS END=7998888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:34:0,93,1296:0,93,255:40,0 chr1 7999955 . C . PASS END=8000054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,104,1443:0,104,255:40,0 chr1 8021750 . G . PASS END=8021750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 8021797 . T . PASS END=8021797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 8021847 . G . PASS END=8021847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 8022846 . A . PASS END=8022846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1551:0,113,255:40,0 chr1 8022847 . T . PASS END=8022847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1362:0,73,255:40,0 chr1 8022848 . G . PASS END=8022854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1327:0,90,255:40,0 chr1 8022855 . A . PASS END=8022855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1389:0,60,255:40,0 chr1 8022856 . A . PASS END=8022858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,118,1576:0,118,255:40,0 chr1 8022859 . G . PASS END=8022859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1312:0,52,255:40,0 chr1 8022860 . A . PASS END=8022862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,101,1424:0,101,255:40,0 chr1 8022863 . T . PASS END=8022863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:76:47:0,76,1333:0,76,255:40,0 chr1 8022864 . C . PASS END=8022915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:80:45:0,80,1485:0,80,255:40,0 chr1 8022916 . A . PASS END=8022916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1354:0,60,255:30,0 chr1 8022917 . T . PASS END=8022935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,92,255:35,0 chr1 8025373 . C . PASS END=8025373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:25,0 chr1 8025384 . A . PASS END=8025384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 8025385 . T . PASS END=8025385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 8025386 . T . PASS END=8025391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 8025392 . C . PASS END=8025392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 8025393 . A . PASS END=8025441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1102:0,87,255:40,0 chr1 8025442 . T . PASS END=8025443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr1 8025444 . G . PASS END=8025462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1395:0,111,255:38,0 chr1 8025463 . G . PASS END=8025463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 8025464 . C . PASS END=8025485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:37,0 chr1 8029405 . G . PASS END=8029450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:59:0,120,1800:0,159,255:40,0 chr1 8029451 . A . PASS END=8029464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:63:0,117,1800:0,117,255:40,0 chr1 8030954 . T . PASS END=8031023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:31:0,93,1156:0,93,255:39,0 chr1 8037712 . G . PASS END=8037798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:55:0,120,1800:0,140,255:40,0 chr1 8044939 . G . PASS END=8044941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 8044942 . T . PASS END=8044944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8044945 . A . PASS END=8044946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 8044947 . T . PASS END=8044947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:12,0 chr1 8044948 . T . PASS END=8044955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 8044956 . C . PASS END=8044966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,747:0,63,255:26,0 chr1 8044967 . C . PASS END=8044973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 8044974 . A . PASS END=8044974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:26,0 chr1 8044975 . A . PASS END=8044991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1017:0,84,255:30,0 chr1 8044992 . G . PASS END=8044992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 8044993 . G . PASS END=8045000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:30,0 chr1 8045001 . C . PASS END=8045002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:30,0 chr1 8045003 . T . PASS END=8045011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:31,0 chr1 8045012 . G . PASS END=8045012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 8045013 . G . PASS END=8045028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:32:0,89,1233:0,89,255:36,0 chr1 8045029 . T . PASS END=8045029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:34,0 chr1 8045030 . C . PASS END=8045046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1349:0,95,255:37,0 chr1 8045047 . T . PASS END=8045047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 8045048 . T . PASS END=8045054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1396:0,101,255:37,0 chr1 8045055 . G . PASS END=8045055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1457:0,76,255:35,0 chr1 8045056 . C . PASS END=8045114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1342:0,98,255:40,0 chr1 8045163 . A . PASS END=8045163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr1 8045239 . G . PASS END=8045239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 8045299 . T . PASS END=8045299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 8064582 . T . PASS END=8064615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,101,1382:0,101,255:40,0 chr1 8064616 . G . PASS END=8064618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,111,1665:0,135,255:39,0 chr1 8073270 . C . PASS END=8073674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:35:0,82,1305:0,82,255:40,0 chr1 8073675 . A . PASS END=8073675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1147:0,58,255:32,0 chr1 8073676 . C . PASS END=8073880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:35:0,80,1295:0,80,255:40,0 chr1 8073881 . G . PASS END=8073881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 8073882 . C . PASS END=8074169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:35:0,84,1274:0,84,255:40,0 chr1 8074170 . A . PASS END=8074170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:31,0 chr1 8074171 . G . PASS END=8074171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 8074172 . A . PASS END=8074172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1107:0,55,255:31,0 chr1 8074173 . G . PASS END=8074173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 8074174 . A . PASS END=8074174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1103:0,50,255:32,0 chr1 8074175 . G . PASS END=8074202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1203:0,86,255:32,0 chr1 8074203 . A . PASS END=8074241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 8074242 . A . PASS END=8074242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 8074243 . A . PASS END=8074252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 8074253 . A . PASS END=8074254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 8074255 . T . PASS END=8074260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8074261 . A . PASS END=8074277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 8074278 . G . PASS END=8074281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:21,0 chr1 8074282 . G . PASS END=8074282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 8074283 . A . PASS END=8074283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8074284 . A . PASS END=8074334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,599:0,41,255:19,0 chr1 8074335 . C . PASS END=8074335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 8074336 . T . PASS END=8074336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:20,0 chr1 8074337 . C . PASS END=8074343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 8074344 . T . PASS END=8074345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:46:21:0,46,706:0,46,255:21,0 chr1 8074346 . G . PASS END=8074349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 8074350 . C . PASS END=8074350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 8074351 . A . PASS END=8074367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,897:0,61,255:26,0 chr1 8074368 . A . PASS END=8074368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:24,0 chr1 8074369 . A . PASS END=8074372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 8074373 . G . PASS END=8074377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 8074378 . G . PASS END=8074389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,992:0,78,255:26,0 chr1 8074390 . G . PASS END=8074390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:24,0 chr1 8074391 . A . PASS END=8074400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,757:0,61,255:26,0 chr1 8074401 . T . PASS END=8074401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 8074402 . G . PASS END=8074402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:24,0 chr1 8074403 . G . PASS END=8074404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:26,0 chr1 8074405 . C . PASS END=8074405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr1 8074406 . C . PASS END=8074429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 8074430 . T . PASS END=8074430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:21,0 chr1 8074431 . C . PASS END=8074438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 8074439 . C . PASS END=8074444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:19,0 chr1 8074445 . T . PASS END=8074448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 8074449 . A . PASS END=8074456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 8075330 . T . PASS END=8075460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,151,255:40,0 chr1 8075555 . T . PASS END=8075679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:50:0,120,1800:0,120,255:40,0 chr1 8378169 . A . PASS END=8378206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:13,0 chr1 8378207 . G . PASS END=8378209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 8378210 . C . PASS END=8378210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 8378211 . A . PASS END=8378246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,623:0,51,255:18,0 chr1 8384366 . G . PASS END=8384372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 8384373 . C . PASS END=8384403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 8384404 . C . PASS END=8384423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 8384424 . A . PASS END=8384424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 8384425 . T . PASS END=8384437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 8384438 . A . PASS END=8384472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 8384473 . C . PASS END=8384473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 8384474 . A . PASS END=8384480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 8384481 . A . PASS END=8384481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 8384482 . C . PASS END=8384492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:19,0 chr1 8384493 . T . PASS END=8384497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384498 . C . PASS END=8384508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 8384509 . T . PASS END=8384511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr1 8384512 . C . PASS END=8384512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 8384513 . C . PASS END=8384518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 8384519 . A . PASS END=8384519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 8384520 . A . PASS END=8384522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 8384523 . A . PASS END=8384523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 8384524 . C . PASS END=8384524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,705:0,24,255:19,0 chr1 8384525 . T . PASS END=8384525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 8384526 . T . PASS END=8384526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384527 . C . PASS END=8384527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:19,0 chr1 8384528 . A . PASS END=8384528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384529 . A . PASS END=8384529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:19,0 chr1 8384530 . A . PASS END=8384530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384531 . C . PASS END=8384533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 8384534 . C . PASS END=8384563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:19,0 chr1 8384564 . T . PASS END=8384565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,416:0,34,255:14,0 chr1 8384566 . C . PASS END=8384566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,466:0,18,255:13,0 chr1 8384567 . C . PASS END=8384567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:14,0 chr1 8384568 . C . PASS END=8384568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 8384569 . A . PASS END=8384569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,382:0,1,255:11,0 chr1 8384570 . C . PASS END=8384570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 8384571 . C . PASS END=8384574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 8384575 . G . LowGQ END=8384575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,6:17:0:17:0,0,202:63,0,255:9,0 chr1 8384576 . C . PASS END=8384581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 8384582 . A . LowGQ END=8384583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,455:6,0,255:16,0 chr1 8384584 . C . PASS END=8384584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 8384585 . A . PASS END=8384585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,664:0,35,255:18,0 chr1 8384586 . C . PASS END=8384589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 8384590 . G . LowGQ END=8384591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,443:39,0,255:16,0 chr1 8384592 . G . PASS END=8384593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,648:0,49,255:20,0 chr1 8384594 . C . PASS END=8384595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384596 . G . LowGQ END=8384596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,6:21:0:21:0,0,357:117,0,255:15,0 chr1 8384597 . C . PASS END=8384597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 8384598 . T . LowGQ END=8384599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,390:26,0,255:17,0 chr1 8384600 . G . PASS END=8384600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 8384601 . A . PASS END=8384601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,643:0,16,255:18,0 chr1 8384602 . G . LowGQ END=8384602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,529:31,0,255:18,0 chr1 8384603 . C . PASS END=8384603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384604 . T . PASS END=8384604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,566:0,13,255:18,0 chr1 8384605 . G . PASS END=8384605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384606 . G . PASS END=8384607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,647:0,46,255:20,0 chr1 8384608 . G . PASS END=8384609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8384610 . A . PASS END=8384610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,588:0,16,255:17,0 chr1 8384611 . C . PASS END=8384611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 8384612 . T . LowGQ END=8384612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,596:6,0,255:19,0 chr1 8384613 . T . PASS END=8384613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 8384614 . C . PASS END=8384614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:19,0 chr1 8384615 . G . PASS END=8384615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 8384616 . G . PASS END=8384616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,711:0,38,255:21,0 chr1 8384617 . G . PASS END=8384617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 8384618 . G . PASS END=8384618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 8384619 . A . PASS END=8384619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,659:0,19,255:18,0 chr1 8384620 . C . PASS END=8384620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,837:0,36,255:22,0 chr1 8384621 . C . PASS END=8384621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 8384622 . T . PASS END=8384625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,792:0,42,255:22,0 chr1 8384626 . C . PASS END=8384626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,837:0,12,255:23,0 chr1 8384627 . C . PASS END=8384633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,894:0,64,255:24,0 chr1 8384634 . G . PASS END=8384634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:22,0 chr1 8384635 . G . PASS END=8384638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:23,0 chr1 8384639 . T . PASS END=8384639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,784:0,45,255:22,0 chr1 8384640 . T . PASS END=8384640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:23,0 chr1 8384641 . C . PASS END=8384641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:22,0 chr1 8384642 . C . PASS END=8384643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,862:0,61,255:23,0 chr1 8384644 . G . PASS END=8384645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 8384646 . A . PASS END=8384659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:23,0 chr1 8384660 . G . PASS END=8384660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 8384661 . G . PASS END=8384666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr1 8384667 . T . PASS END=8384667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 8384668 . T . PASS END=8384668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 8384669 . C . PASS END=8384670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 8384671 . C . PASS END=8384673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,885:0,75,255:25,0 chr1 8384674 . T . PASS END=8384674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 8384675 . G . PASS END=8384675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,828:0,28,255:23,0 chr1 8384676 . G . PASS END=8384685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr1 8384686 . C . PASS END=8384686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr1 8384687 . A . PASS END=8384687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 8384688 . G . PASS END=8384688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:25,0 chr1 8384689 . C . PASS END=8384703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 8384704 . G . PASS END=8384708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 8384709 . A . PASS END=8384709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 8384710 . C . PASS END=8384713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 8384714 . A . PASS END=8384754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 8384755 . C . PASS END=8384786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,651:0,51,255:19,0 chr1 8385358 . G . PASS END=8385450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:38:0,82,1260:0,82,255:40,0 chr1 8385878 . G . PASS END=8385882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 8385883 . C . PASS END=8385884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 8385885 . G . PASS END=8385885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 8385886 . C . PASS END=8385893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:31,0 chr1 8385894 . C . PASS END=8385894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 8385895 . T . PASS END=8385895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1081:0,93,255:31,0 chr1 8385896 . C . PASS END=8385896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:29,0 chr1 8385897 . G . PASS END=8385898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 8385899 . T . PASS END=8385899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr1 8385900 . C . PASS END=8385901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 8385902 . T . PASS END=8385902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 8385903 . G . PASS END=8385918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1129:0,80,255:32,0 chr1 8385919 . A . PASS END=8385919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 8385920 . T . PASS END=8385920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr1 8385921 . T . PASS END=8385921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 8385922 . G . PASS END=8385976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1188:0,86,255:35,0 chr1 8385977 . T . PASS END=8385979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 8385980 . G . PASS END=8385984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 8385985 . G . PASS END=8386067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,808:0,62,255:26,0 chr1 8386068 . G . PASS END=8386094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 8386095 . C . PASS END=8386095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr1 8386096 . C . PASS END=8386102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 8390269 . G . PASS END=8390269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 8390270 . T . PASS END=8390270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 8390271 . C . PASS END=8390283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 8390284 . T . PASS END=8390310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 8390311 . G . PASS END=8390311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 8390312 . G . PASS END=8390312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 8390313 . G . PASS END=8390325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 8390326 . T . PASS END=8390326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 8390327 . C . PASS END=8390330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 8390331 . A . PASS END=8390332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 8390333 . G . PASS END=8390346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 8390347 . A . PASS END=8390383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 8390384 . G C, 50.00 PASS DP=11;MQ=250.00;MQRankSum=2.520;ReadPosRankSum=1.769;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,7,0:0.636,0.000:11:1,4,0:3,3,0:48:85,0,48,250,143,393:238,0,122:4,0:5.0000e+01,7.6364e-05,5.1200e+01,2.5033e+02,1.7783e+02,3.9640e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,3,4:3,1,4,3 chr1 8390385 . A . PASS END=8390392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,299:0,30,255:10,0 chr1 8390393 . C . PASS END=8390396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 8390397 . G . PASS END=8390421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 8390422 . A . PASS END=8390422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 8390423 . G . PASS END=8390423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 8390424 . A . PASS END=8390424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 8390425 . G . PASS END=8390449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr1 8390450 . G . PASS END=8390457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 8390458 . C . PASS END=8390479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 8390480 . G . PASS END=8390480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 8390481 . C . PASS END=8390494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 8390495 . A G, 50.00 PASS DP=9;MQ=250.00;MQRankSum=1.920;ReadPosRankSum=0.956;FractionInformativeReads=0.889;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,5,0:0.625,0.000:8:2,3,0:1,2,0:48:85,0,49,171,107,278:175,0,81:3,0:5.0000e+01,7.1446e-05,5.1903e+01,1.7079e+02,1.4197e+02,2.8099e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,2,3:2,1,4,1 chr1 8390496 . C . PASS END=8390499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 8390500 . T . PASS END=8390517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:11,0 chr1 8390518 . C . PASS END=8390518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 8390519 . T . PASS END=8390525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 8390526 . A . PASS END=8390526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 8390527 . G . PASS END=8390528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 8390529 . C . PASS END=8390532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 8390533 . C . PASS END=8390534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 8390535 . T . PASS END=8390535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr1 8390536 . C . PASS END=8390539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 8390540 . C . PASS END=8390541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 8390542 . C . PASS END=8390542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 8390543 . G . PASS END=8390543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 8390544 . G . PASS END=8390557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:15,0 chr1 8390558 . C . PASS END=8390559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 8390560 . G . PASS END=8390577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 8390578 . G . PASS END=8390578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 8390579 . C . PASS END=8390588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 8390589 . C . PASS END=8390589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 8390590 . C . PASS END=8390590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:11,0 chr1 8390591 . C . PASS END=8390605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,437:0,39,255:13,0 chr1 8390606 . C . PASS END=8390607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 8390608 . T . PASS END=8390609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 8390610 . A . PASS END=8390614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8390615 . G . PASS END=8390615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 8390616 . G . PASS END=8390618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 8390619 . A . PASS END=8390623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 8390624 . C . PASS END=8390624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 8390625 . C . PASS END=8390625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 8390626 . T . PASS END=8390626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 8390627 . G . PASS END=8390634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 8390635 . T . PASS END=8390635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr1 8390636 . C . PASS END=8390666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,437:0,39,255:13,0 chr1 8390667 . A . PASS END=8390667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 8390668 . A . PASS END=8390685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 8390686 . T . PASS END=8390686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:10,0 chr1 8390687 . T . PASS END=8390721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 8390722 . C . PASS END=8390722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 8390723 . C . PASS END=8390726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 8390727 . C . PASS END=8390728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 8390729 . T . PASS END=8390729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 8390730 . G . PASS END=8390736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 8390737 . T . PASS END=8390743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 8390744 . G . PASS END=8390744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 8390745 . C . PASS END=8390745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 8390746 . C . PASS END=8390746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 8390747 . G . PASS END=8390748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 8390749 . C . PASS END=8390749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr1 8390750 . C . PASS END=8390757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 8390758 . T . PASS END=8390758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 8390759 . C . PASS END=8390764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 8390765 . C . PASS END=8390774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 8390775 . C . PASS END=8390775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 8390776 . C . PASS END=8390781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:13,0 chr1 8390782 . G . PASS END=8390796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,474:0,42,255:15,0 chr1 8390797 . A . PASS END=8390797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 8390798 . C . PASS END=8390800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,537:0,48,255:16,0 chr1 8390801 . T . PASS END=8390802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 8390803 . G . PASS END=8390812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 8390813 . G . PASS END=8390813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:13,0 chr1 8390814 . G . PASS END=8390815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 8390816 . C . PASS END=8390816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr1 8390817 . A . PASS END=8390831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:19,0 chr1 8390832 . A . PASS END=8390844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,725:0,60,255:21,0 chr1 8390845 . A . PASS END=8390845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 8390846 . C . PASS END=8390846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8390847 . G . PASS END=8390850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 8390851 . A . PASS END=8390851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 8390852 . C . PASS END=8390852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 8390853 . A . PASS END=8390853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr1 8390854 . T . PASS END=8390877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:25,0 chr1 8390878 . C . PASS END=8390887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:28,0 chr1 8390888 . G A, 49.95 PASS DP=28;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=3.178;FractionInformativeReads=0.964;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,13,0:0.481,0.000:27:7,6,0:7,7,0:48:85,0,50,465,472,937:255,0,255:14,0:4.9952e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,10,3:7,7,9,4 chr1 8390889 . A . PASS END=8390893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 8390894 . A . PASS END=8390894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 8390895 . T . PASS END=8390898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 8390899 . G . PASS END=8390899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 8390900 . G . PASS END=8390909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 8390910 . A . PASS END=8390910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:27,0 chr1 8390911 . G . PASS END=8390925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:31,0 chr1 8390926 . C . PASS END=8390927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 8390928 . A . PASS END=8390928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 8390929 . T . PASS END=8390935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 8390936 . C . PASS END=8390967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:26,0 chr1 8390968 . G . PASS END=8390968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 8390969 . G . PASS END=8390996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,779:0,69,255:23,0 chr1 8395497 . G . PASS END=8395500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr1 8395501 . C . PASS END=8395506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:28,0 chr1 8395507 . T . PASS END=8395507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:26,0 chr1 8395508 . C . PASS END=8395513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 8395514 . C . PASS END=8395514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 8395515 . A . PASS END=8395522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1076:0,87,255:31,0 chr1 8395523 . G . PASS END=8395559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1147:0,80,255:40,0 chr1 8395560 . G T, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.425;ReadPosRankSum=1.195;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,23,0:0.561,0.000:41:12,10,0:6,13,0:48:85,0,49,790,636,1426:255,0,255:18,0:5.0000e+01,7.2740e-05,5.1711e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,5,14,9:9,9,11,12 chr1 8395561 . C . PASS END=8395597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,99,1565:0,99,255:40,0 chr1 8395598 . C . PASS END=8395674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,125,255:40,0 chr1 8397876 . G . PASS END=8397886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:26,0 chr1 8397887 . T . PASS END=8397887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,946:0,81,255:27,0 chr1 8397888 . T . PASS END=8397888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 8397889 . C . PASS END=8397891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 8397892 . G . PASS END=8397895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 8397896 . A . PASS END=8397899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 8397900 . T . PASS END=8397900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr1 8397901 . G . PASS END=8397912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1186:0,83,255:30,0 chr1 8397913 . A . PASS END=8397913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 8397914 . G . PASS END=8397943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1225:0,86,255:34,0 chr1 8397944 . G . PASS END=8397945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 8397946 . C . PASS END=8397983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1257:0,81,255:37,0 chr1 8397984 . A . PASS END=8397984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:33,0 chr1 8397985 . C . PASS END=8398019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,83,255:35,0 chr1 8398020 . G . PASS END=8398020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 8398021 . T . PASS END=8398022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 8398023 . T . PASS END=8398023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:26,0 chr1 8398024 . C . PASS END=8398024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 8398025 . T . PASS END=8398025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 8398026 . A . PASS END=8398026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 8398027 . C . PASS END=8398042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 8398043 . T . PASS END=8398052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:21:0,45,675:0,63,255:18,0 chr1 8399553 . C . PASS END=8399557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,807:0,66,255:25,0 chr1 8399558 . C . PASS END=8399558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 8399559 . T . PASS END=8399572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,850:0,75,255:26,0 chr1 8399573 . G . PASS END=8399590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 8399591 . A . PASS END=8399593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:29:0,76,989:0,76,255:27,0 chr1 8399594 . C . PASS END=8399621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr1 8399622 . G . PASS END=8399622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 8399623 . C . PASS END=8399625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 8399626 . G . PASS END=8399646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,953:0,65,255:26,0 chr1 8399647 . C . PASS END=8399647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 8399648 . T . PASS END=8399648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 8399649 . C . PASS END=8399653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 8399654 . A . PASS END=8399655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 8399656 . C . PASS END=8399667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1163:0,80,255:29,0 chr1 8399668 . C . PASS END=8399668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 8399669 . C . PASS END=8399675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 8399676 . T . PASS END=8399676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 8399677 . C . PASS END=8399678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 8399679 . G . PASS END=8399679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 8399680 . C . PASS END=8399682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 8399683 . A . PASS END=8399683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:27,0 chr1 8399684 . A . PASS END=8399696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:30,0 chr1 8399697 . T . PASS END=8399705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 8399706 . C . PASS END=8399707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 8399708 . C . PASS END=8399708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 8399709 . T . PASS END=8399709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr1 8399710 . G . PASS END=8399725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,67,255:26,0 chr1 8399726 . T . PASS END=8399726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 8399727 . C . PASS END=8399730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 8399731 . G . PASS END=8399758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,47,255:19,0 chr1 8403807 . T . PASS END=8403810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:18,0 chr1 8403811 . C . PASS END=8403811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 8403812 . A . PASS END=8403813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 8403814 . G . PASS END=8403814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 8403815 . G . PASS END=8403830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,738:0,60,255:26,0 chr1 8403831 . A . PASS END=8403841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr1 8403842 . C . PASS END=8403842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 8403843 . A . PASS END=8403843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:23,0 chr1 8403844 . T . PASS END=8403852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 8403853 . A . PASS END=8403855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1048:0,87,255:29,0 chr1 8403856 . T . PASS END=8403856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 8403857 . C . PASS END=8403857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 8403858 . T . PASS END=8403858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:28,0 chr1 8403859 . C . PASS END=8403859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 8403860 . T . PASS END=8403860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:28,0 chr1 8403861 . C . PASS END=8403943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1014:0,80,255:35,0 chr1 8403944 . C . PASS END=8403944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 8403945 . G . PASS END=8403956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 8403957 . T . PASS END=8403957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 8403958 . T . PASS END=8403962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 8403963 . A . PASS END=8403965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 8403966 . C . PASS END=8403966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 8403967 . T . PASS END=8403970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:25,0 chr1 8403971 . G . PASS END=8403971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:24,0 chr1 8403972 . T . PASS END=8403977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 8403978 . C . PASS END=8403978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr1 8403979 . T . PASS END=8403979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 8403980 . G . PASS END=8403981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 8403982 . G . PASS END=8403988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr1 8403989 . G . PASS END=8403989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:21,0 chr1 8403990 . T . PASS END=8403994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,71,255:23,0 chr1 8403995 . C . PASS END=8403996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 8403997 . C . PASS END=8403998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 8403999 . C . PASS END=8403999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 8404000 . T . PASS END=8404000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 8404001 . G . PASS END=8404001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 8404002 . T . PASS END=8404006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,696:0,71,255:24,0 chr1 8404007 . C . PASS END=8404008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:22,0 chr1 8404009 . T . PASS END=8404013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 8404014 . G . PASS END=8404044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:17:0,46,615:0,46,255:19,0 chr1 8404045 . A . PASS END=8404045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:16,0 chr1 8404046 . G . PASS END=8404065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 8404066 . A . PASS END=8404073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 8415147 . T . PASS END=8415180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:52:0,120,1800:0,127,255:40,0 chr1 8415479 . C . PASS END=8415511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,545:0,41,255:18,0 chr1 8415512 . C . PASS END=8415515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 8415516 . G . PASS END=8415516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 8415517 . C . PASS END=8415519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8415520 . G . PASS END=8415551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr1 8415552 . T . PASS END=8415552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 8415553 . G . PASS END=8415556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 8415557 . A . PASS END=8415557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 8415558 . G . PASS END=8415559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,595:0,46,255:19,0 chr1 8415560 . C . PASS END=8415569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 8415570 . C . PASS END=8415591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,637:0,47,255:18,0 chr1 8415592 . C . PASS END=8415592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 8415593 . T . PASS END=8415595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 8415596 . A . PASS END=8415596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 8415597 . G . PASS END=8415611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,592:0,51,255:17,0 chr1 8415612 . A . PASS END=8415612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:14,0 chr1 8415613 . C . PASS END=8415613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 8415614 . A . PASS END=8415614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,466:0,18,255:13,0 chr1 8415615 . T . PASS END=8415621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 8415622 . T . PASS END=8415622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,415:0,28,255:13,0 chr1 8415623 . G . PASS END=8415631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 8415632 . C . PASS END=8415632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 8415633 . C . PASS END=8415643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 8415644 . C . PASS END=8415648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:16:0,24,360:0,48,255:8,0 chr1 8415649 . G . PASS END=8415659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:12:8:0,12,180:0,24,255:6,0 chr1 8416160 . C . PASS END=8416199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,235:8,0 chr1 8416200 . C . PASS END=8416200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr1 8416201 . T . PASS END=8416205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 8416206 . A . PASS END=8416206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:7,0 chr1 8416207 . A . PASS END=8416209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 8416210 . A . PASS END=8416210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr1 8416211 . G . PASS END=8416212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 8416213 . G . PASS END=8416213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 8416214 . G . PASS END=8416214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 8416215 . G . PASS END=8416220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 8416221 . G . PASS END=8416221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,382:0,8,255:11,0 chr1 8416222 . A . PASS END=8416222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 8416223 . G . PASS END=8416223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 8416224 . A . PASS END=8416234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 8416235 . G . PASS END=8416235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:10,0 chr1 8416236 . G . PASS END=8416237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 8416238 . A . PASS END=8416238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 8416239 . G . PASS END=8416248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 8416249 . G . PASS END=8416249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 8416250 . C . PASS END=8416280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,405:0,36,255:13,0 chr1 8416281 . C . PASS END=8416281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 8416282 . A . PASS END=8416282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 8416283 . G . PASS END=8416283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 8416284 . C . PASS END=8416284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 8416285 . G . PASS END=8416285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 8416286 . G . PASS END=8416289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 8416290 . A . PASS END=8416291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 8416292 . C . PASS END=8416294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 8416295 . G . PASS END=8416295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 8416296 . G . PASS END=8416296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 8416297 . C . PASS END=8416306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 8418256 . C . PASS END=8418263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,807:0,69,255:23,0 chr1 8418264 . A . PASS END=8418264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 8418265 . G . PASS END=8418282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,839:0,65,255:26,0 chr1 8418283 . G . PASS END=8418294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 8418295 . A . PASS END=8418295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 8418296 . G . PASS END=8418308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,965:0,84,255:29,0 chr1 8418309 . T . PASS END=8418309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 8418310 . G . PASS END=8418317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:30,0 chr1 8418318 . T . PASS END=8418318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 8418319 . G . PASS END=8418349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1064:0,90,255:31,0 chr1 8418350 . G . PASS END=8418350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:26,0 chr1 8418351 . G . PASS END=8418366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1155:0,90,255:30,0 chr1 8418367 . T . PASS END=8418371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 8418372 . G . PASS END=8418372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 8418373 . A . PASS END=8418376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1055:0,74,255:26,0 chr1 8418377 . C . PASS END=8418380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 8418381 . C . PASS END=8418381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 8418382 . G . PASS END=8418383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 8418384 . T . PASS END=8418384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 8418385 . C . PASS END=8418385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 8418386 . T . PASS END=8418386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 8418387 . G . PASS END=8418389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 8418390 . T . PASS END=8418402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 8418403 . C . PASS END=8418407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 8418408 . A . PASS END=8418411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 8418412 . T . PASS END=8418412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 8418413 . G . PASS END=8418452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,784:0,63,255:26,0 chr1 8418453 . A . PASS END=8418491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,613:0,41,255:19,0 chr1 8418492 . T . PASS END=8418492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:15,0 chr1 8418493 . G . PASS END=8418502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr1 8418503 . A . PASS END=8418503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 8418504 . A . PASS END=8418509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 8418510 . T . PASS END=8418521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 8418522 . G . PASS END=8418522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 8418523 . T . PASS END=8418559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr1 8418560 . C . PASS END=8418560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 8418561 . T . PASS END=8418563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 8418564 . A . PASS END=8418565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 8418566 . G . PASS END=8418582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 8418583 . G . PASS END=8418583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 8418584 . C . PASS END=8418603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 8418604 . G . PASS END=8418605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 8418606 . T . PASS END=8418606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 8418607 . T . PASS END=8418629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 8418630 . C . PASS END=8418643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 8418644 . C A, 88.86 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,15,0:1.000,0.000:15:0,5,0:0,10,0:39:127,42,0,227,227,227:255,45,0:0,0:8.8863e+01,3.8863e+01,5.6435e-04,2.2363e+02,2.5840e+02,2.2664e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,8,7:0,0,6,9:8418644 chr1 8418645 . C . PASS END=8418649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 8418650 . T C, 88.87 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,15,0:1.000,0.000:15:0,5,0:0,10,0:39:127,42,0,227,227,227:255,45,0:0,0:8.8865e+01,3.8865e+01,5.6409e-04,2.2364e+02,2.5841e+02,2.2665e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,9,6:0,0,5,10:8418644 chr1 8418651 . C . PASS END=8418651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 8418652 . G . PASS END=8418690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr1 8418691 . G . PASS END=8418691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 8418692 . C . PASS END=8418698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 8418699 . A . PASS END=8418699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:15,0 chr1 8418700 . T . PASS END=8418701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 8418702 . G . PASS END=8418702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 8418703 . T . PASS END=8418704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 8418705 . G . PASS END=8418705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 8418706 . G . PASS END=8418708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 8418709 . C . PASS END=8418709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 8418710 . G . PASS END=8418711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:17,0 chr1 8418712 . C . PASS END=8418712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 8418713 . G . PASS END=8418719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 8418720 . A . PASS END=8418720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr1 8418721 . G . PASS END=8418721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 8418722 . G . PASS END=8418722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 8418723 . C . PASS END=8418728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 8418729 . A . PASS END=8418729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 8418730 . T . PASS END=8418739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 8418740 . C . PASS END=8418743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 8418744 . A . PASS END=8418744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:12,0 chr1 8418745 . G . PASS END=8418756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 8418757 . G . PASS END=8418757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 8418758 . G . PASS END=8418758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 8418759 . T . PASS END=8418759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 8418760 . T . PASS END=8418764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 8418765 . G . PASS END=8418765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8418766 . G . PASS END=8418766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 8418767 . C . PASS END=8418768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 8418769 . T . PASS END=8418769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 8418770 . G . PASS END=8418775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 8418776 . G . PASS END=8418777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,572:0,34,255:15,0 chr1 8418778 . G . PASS END=8418780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 8418781 . G . PASS END=8418781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 8418782 . G . PASS END=8418783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 8418784 . T . PASS END=8418784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 8418785 . G . PASS END=8418786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 8418787 . G . PASS END=8418787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 8418788 . G . PASS END=8418788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 8418789 . T . PASS END=8418789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 8418790 . T . PASS END=8418791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 8418792 . G . PASS END=8418792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 8418793 . T . PASS END=8418809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,585:0,40,255:19,0 chr1 8418810 . G . PASS END=8418811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 8418812 . C . PASS END=8418812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 8418813 . C . PASS END=8418813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8418814 . G . PASS END=8418814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 8418815 . G . PASS END=8418815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8418816 . G . PASS END=8418816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 8418817 . C . PASS END=8418818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8418819 . T . PASS END=8418819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr1 8418820 . A . PASS END=8418823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 8418824 . G . PASS END=8418824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 8418825 . C . PASS END=8418831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 8418832 . T . PASS END=8418832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,746:0,30,255:21,0 chr1 8418833 . C . PASS END=8418835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 8418836 . A . PASS END=8418836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 8418837 . A . PASS END=8418838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 8418839 . G . PASS END=8418841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 8418842 . A . PASS END=8418842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 8418843 . G . PASS END=8418843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:19,0 chr1 8418844 . G . PASS END=8418850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 8418851 . G . PASS END=8418862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:21:0,50,747:0,50,255:20,0 chr1 8418863 . G . PASS END=8418866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 8418867 . G . PASS END=8418867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 8418868 . G . PASS END=8418868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 8418869 . C . PASS END=8418869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 8418870 . A . PASS END=8418879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 8418880 . T . PASS END=8418880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 8418881 . G . PASS END=8418881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 8418882 . G . PASS END=8418882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 8418883 . T . PASS END=8418883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:19,0 chr1 8418884 . G . PASS END=8418884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 8418885 . G . PASS END=8418885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8418886 . T . PASS END=8418886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,579:0,46,255:19,0 chr1 8418887 . T . PASS END=8418890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8418891 . G . PASS END=8418891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 8418892 . G . PASS END=8418892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8418893 . T . PASS END=8418893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 8418894 . G . PASS END=8418894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 8418895 . G . PASS END=8418895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 8418896 . C . PASS END=8418896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 8418897 . T . PASS END=8418898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,859:0,56,255:24,0 chr1 8418899 . G . PASS END=8418899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 8418900 . A . PASS END=8418900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 8418901 . A . PASS END=8418906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 8418907 . G . PASS END=8418907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 8418908 . C . PASS END=8418922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 8418923 . A . PASS END=8418923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 8418924 . C . PASS END=8418926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8418927 . C . PASS END=8418949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,559:0,45,255:19,0 chr1 8418950 . A . PASS END=8418953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 8418954 . T . PASS END=8418954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 8418955 . C . PASS END=8418959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 8418960 . G . PASS END=8418976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 8419824 . A . PASS END=8419867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1223:0,86,255:37,0 chr1 8419868 . G . PASS END=8419869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:38:0,48,1302:0,48,255:35,2 chr1 8419870 . T . PASS END=8419870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:34:40:0,34,1264:0,34,255:35,2 chr1 8419871 . C . PASS END=8419873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1311:0,51,255:36,2 chr1 8419874 . T . PASS END=8419874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:37:41:0,37,1238:0,37,255:36,2 chr1 8419875 . C . PASS END=8419885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:41:0,85,1443:0,85,255:40,0 chr1 8419886 . T . PASS END=8419886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1304:0,68,255:37,0 chr1 8419887 . C . PASS END=8419947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1117:0,80,255:40,0 chr1 8419948 . T . PASS END=8419948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 8419949 . C . PASS END=8419957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,979:0,84,255:28,0 chr1 8419958 . T . PASS END=8419958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,795:0,50,255:25,0 chr1 8419959 . C . PASS END=8419960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 8419961 . T . PASS END=8419961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 8419962 . G . PASS END=8419989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:24:0,63,945:0,67,255:26,0 chr1 8419990 . A . PASS END=8420000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,53,255:19,0 chr1 8420001 . T . PASS END=8420007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:15:0,33,495:0,45,255:13,0 chr1 8420008 . G . PASS END=8420008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:10,0 chr1 8420009 . C . PASS END=8420019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,29,255:10,0 chr1 8420020 . T . PASS END=8420038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,186:6,0 chr1 8420039 . T . PASS END=8420039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 8420040 . G . PASS END=8420043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:5,0 chr1 8420044 . A . PASS END=8420044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 8420045 . A . PASS END=8420046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 8420172 . C . PASS END=8420173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 8420174 . A . PASS END=8420174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 8420175 . G . PASS END=8420181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 8420182 . G . PASS END=8420182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 8420183 . G . PASS END=8420189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 8420190 . T . PASS END=8420190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 8420191 . G . PASS END=8420199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 8420200 . T . PASS END=8420200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 8420201 . G . PASS END=8420228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 8420229 . C . PASS END=8420229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 8420230 . T . PASS END=8420231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr1 8420232 . C . PASS END=8420232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 8420233 . T . PASS END=8420236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 8420237 . T . PASS END=8420237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 8420238 . G . PASS END=8420248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 8420249 . G . PASS END=8420249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 8420250 . C . PASS END=8420259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 8420260 . C . PASS END=8420260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 8420261 . C . PASS END=8420269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 8420270 . G A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.366;ReadPosRankSum=1.220;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,8,0:0.533,0.000:15:3,2,0:4,6,0:48:85,0,50,286,242,529:255,0,204:7,0:5.0000e+01,6.6010e-05,5.2855e+01,2.8623e+02,2.7715e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,4,4:5,2,4,4 chr1 8420271 . T . PASS END=8420271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 8420272 . C . PASS END=8420276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 8420277 . G . PASS END=8420277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 8420278 . C . PASS END=8420307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:17,0 chr1 8420308 . G . PASS END=8420315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 8420316 . G . PASS END=8420316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 8420317 . A . PASS END=8420322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:18,0 chr1 8420323 . C . PASS END=8420330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8420331 . C . PASS END=8420358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,714:0,57,255:19,0 chr1 8420359 . A . PASS END=8420359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:15,0 chr1 8420360 . G . PASS END=8420390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,615:0,51,255:18,0 chr1 8420391 . G . PASS END=8420391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 8420392 . G . PASS END=8420402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,613:0,51,255:17,0 chr1 8420403 . G . PASS END=8420403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 8420404 . T . PASS END=8420404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 8420405 . G . PASS END=8420405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 8420406 . G . PASS END=8420406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 8420407 . A . PASS END=8420407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,557:0,7,255:16,0 chr1 8420408 . G . PASS END=8420409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 8420410 . G . PASS END=8420412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 8420413 . A . PASS END=8420413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:14,0 chr1 8420414 . G . PASS END=8420415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 8420416 . T . PASS END=8420416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:14,0 chr1 8420417 . C . PASS END=8420417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 8420418 . G . PASS END=8420423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 8420424 . G . PASS END=8420427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 8420428 . T . PASS END=8420428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:14,0 chr1 8420429 . G . PASS END=8420430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,543:0,31,255:14,0 chr1 8420431 . G . PASS END=8420431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 8420432 . A . PASS END=8420432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:14,0 chr1 8420433 . G . PASS END=8420433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 8420434 . G . PASS END=8420434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 8420435 . A . PASS END=8420435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 8420436 . G . PASS END=8420436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 8420437 . G . PASS END=8420437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 8420438 . G . PASS END=8420438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 8420439 . C . PASS END=8420439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr1 8420440 . C . PASS END=8420440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 8420441 . T . LowGQ END=8420442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,426:0,0,255:13,0 chr1 8420443 . C . PASS END=8420443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 8420444 . A . LowGQ END=8420444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,426:10,0,255:11,0 chr1 8420445 . G . PASS END=8420445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 8420446 . G . LowGQ END=8420446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,432:24,0,255:11,0 chr1 8420447 . G . PASS END=8420447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 8420448 . A . LowGQ END=8420448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,488:7,0,255:11,0 chr1 8420449 . C . PASS END=8420449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:12,0 chr1 8420450 . A . PASS END=8420450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,480:0,1,255:11,0 chr1 8420451 . A . PASS END=8420451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,490:0,17,255:11,0 chr1 8420452 . A . LowGQ END=8420452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,398:8,0,255:10,0 chr1 8420453 . G . PASS END=8420453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 8420454 . G . PASS END=8420454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr1 8420455 . G . PASS END=8420456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 8420457 . T . PASS END=8420457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,400:0,9,255:10,0 chr1 8420458 . G . PASS END=8420459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr1 8420460 . T . LowGQ END=8420460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,302:25,0,255:9,0 chr1 8420461 . G . PASS END=8420461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 8420462 . A . LowGQ END=8420463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,269:19,0,255:8,0 chr1 8420464 . C . PASS END=8420464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 8420465 . A . PASS END=8420465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 8420466 . A . PASS END=8420466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:8,0 chr1 8420467 . A . LowGQ END=8420468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,223:19,0,255:9,0 chr1 8420469 . G . PASS END=8420471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 8420472 . G . PASS END=8420472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:11,0 chr1 8420473 . G . PASS END=8420473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 8420474 . T . LowGQ END=8420475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,218:28,0,246:9,0 chr1 8420476 . G . PASS END=8420476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 8420477 . G . PASS END=8420477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 8420478 . G . PASS END=8420478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 8420479 . G . PASS END=8420479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 8420480 . G . PASS END=8420480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 8420481 . G . LowGQ END=8420481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,235:42,0,255:10,0 chr1 8420482 . C . PASS END=8420482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 8420483 . C . LowGQ END=8420487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,263:0,0,255:10,0 chr1 8420488 . G . PASS END=8420488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 8420489 . G . PASS END=8420489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 8420490 . T . LowGQ END=8420490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,246:64,0,255:7,0 chr1 8420491 . G . PASS END=8420491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 8420492 . G . LowGQ END=8420493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,222:16,0,255:7,0 chr1 8420494 . G . PASS END=8420495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 8420496 . C . LowGQ END=8420502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,169:0,0,249:6,0 chr1 8420503 . G . PASS END=8420504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 8420505 . G . PASS END=8420505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr1 8420506 . G . PASS END=8420506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,252:8,0 chr1 8420507 . G . PASS END=8420507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,182:0,10,182:7,0 chr1 8420508 . T . LowGQ END=8420508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,5:8:0:8:0,0,0:148,0,70:3,0 chr1 8420509 . G . PASS END=8420509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:8,0 chr1 8420510 . G . LowGQ END=8420512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,100:0,0,126:7,0 chr1 8420513 . G . PASS END=8420513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 8420514 . G . LowGQ END=8420516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,45:0,0,109:7,0 chr1 8420517 . G . PASS END=8420520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:11,0 chr1 8420521 . G . PASS END=8420521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,274:0,16,255:10,0 chr1 8420522 . C . LowGQ END=8420522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,135:53,0,188:8,0 chr1 8420523 . G . PASS END=8420524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr1 8420525 . G . LowGQ END=8420528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,255:0,0,255:11,0 chr1 8420529 . A . PASS END=8420531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 8420532 . T . PASS END=8420534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,299:0,19,255:11,0 chr1 8420535 . T . PASS END=8420537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,360:0,36,255:12,0 chr1 8420538 . C . LowGQ END=8420538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,402:0,0,255:12,0 chr1 8420539 . T . PASS END=8420539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,307:0,22,255:12,0 chr1 8420540 . C . PASS END=8420546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,393:0,39,255:13,0 chr1 8420547 . A . PASS END=8420547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 8420548 . G . PASS END=8420549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 8420550 . C . PASS END=8420550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8420551 . C . PASS END=8420552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 8420553 . G . PASS END=8420561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 8420562 . G . PASS END=8420563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 8420564 . G . PASS END=8420565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 8420566 . G . PASS END=8420566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 8420567 . C . PASS END=8420578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:15,0 chr1 8420579 . T . PASS END=8420582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 8420583 . T . PASS END=8420583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 8420584 . G . PASS END=8420584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 8420585 . G . PASS END=8420585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:13,0 chr1 8420586 . C . PASS END=8420588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:1:16:0,1,429:0,1,255:12,0 chr1 8420589 . T . PASS END=8420589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 8420590 . G . PASS END=8420590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 8420591 . A . PASS END=8420593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 8420594 . C . PASS END=8420594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 8420595 . A . LowGQ END=8420596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,326:22,0,255:9,0 chr1 8420597 . G . PASS END=8420597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8420598 . A . LowGQ END=8420598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,363:5,0,255:9,0 chr1 8420599 . G . PASS END=8420599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 8420600 . T . LowGQ END=8420601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,299:13,0,255:10,0 chr1 8420602 . G . PASS END=8420603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 8420604 . A . LowGQ END=8420604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,377:8,0,255:7,0 chr1 8420605 . G . PASS END=8420608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,35,255:13,0 chr1 8420609 . T . LowGQ END=8420609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,271:66,0,255:9,0 chr1 8420610 . G . PASS END=8420610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:10,0 chr1 8420611 . G . PASS END=8420612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:11,0 chr1 8420613 . G . PASS END=8420613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,410:0,12,255:10,0 chr1 8420614 . G . PASS END=8420614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 8420615 . G . LowGQ END=8420619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,221:0,0,255:11,0 chr1 8420620 . C . PASS END=8420621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 8420622 . G . LowGQ END=8420623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,253:0,0,255:10,0 chr1 8420624 . C . PASS END=8420624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 8420625 . G . PASS END=8420626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 8420627 . G . LowGQ END=8420627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,327:16,0,255:11,0 chr1 8420628 . G . PASS END=8420628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 8420629 . G . LowGQ END=8420629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,333:16,0,255:10,0 chr1 8420630 . G . PASS END=8420630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 8420631 . T . LowGQ END=8420631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,300:11,0,255:9,0 chr1 8420632 . G . PASS END=8420632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 8420633 . A . PASS END=8420634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:13:0,31,496:0,31,255:14,0 chr1 8420635 . G . PASS END=8420635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 8420636 . T . PASS END=8420636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,454:0,9,255:14,0 chr1 8420637 . G . PASS END=8420637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 8420638 . T . PASS END=8420639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr1 8420640 . G . PASS END=8420640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8420641 . A . PASS END=8420641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 8420642 . C . PASS END=8420642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8420643 . A . PASS END=8420643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:13,0 chr1 8420644 . G . PASS END=8420645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8420646 . G . PASS END=8420646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,496:0,1,255:13,0 chr1 8420647 . A . PASS END=8420649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 8420650 . T . PASS END=8420650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 8420651 . C . PASS END=8420653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:16,0 chr1 8420654 . G . PASS END=8420654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 8420655 . G . PASS END=8420655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 8420656 . G . PASS END=8420656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 8420657 . C . PASS END=8420657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,466:0,18,255:14,0 chr1 8420658 . T . PASS END=8420658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 8420659 . T . PASS END=8420659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,450:0,18,255:14,0 chr1 8420660 . C . PASS END=8420660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 8420661 . A . PASS END=8420661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 8420662 . G . PASS END=8420664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 8420665 . C . PASS END=8420665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:15,0 chr1 8420666 . T . PASS END=8420666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 8420667 . G . PASS END=8420667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 8420668 . G . PASS END=8420668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,509:0,48,255:16,0 chr1 8420669 . A . PASS END=8420669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:14,0 chr1 8420670 . G . PASS END=8420670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 8420671 . G . PASS END=8420675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr1 8420676 . G . PASS END=8420677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 8420678 . C . PASS END=8420678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 8420679 . A . PASS END=8420679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 8420680 . G . PASS END=8420681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 8420682 . T . PASS END=8420683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 8420684 . G . PASS END=8420690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 8420691 . A . PASS END=8420691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:14,0 chr1 8420692 . T . PASS END=8420692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr1 8420693 . G . PASS END=8420701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 8420702 . T . PASS END=8420704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,540:0,35,255:12,0 chr1 8420705 . G . PASS END=8420705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:10,0 chr1 8420706 . G . PASS END=8420706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,490:0,21,255:13,0 chr1 8420707 . G . LowGQ END=8420707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,6:18:0:18:0,0,299:46,0,255:8,0 chr1 8420708 . C . PASS END=8420715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 8420716 . G . PASS END=8420716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 8420717 . G . PASS END=8420717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 8420718 . T . PASS END=8420719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 8420720 . G . PASS END=8420721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 8420722 . G . LowGQ END=8420722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr1 8420723 . A . PASS END=8420730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 8420731 . T . PASS END=8420731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 8420732 . G . PASS END=8420732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 8420733 . T . PASS END=8420733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 8420734 . G . PASS END=8420738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 8420739 . T . PASS END=8420739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 8420740 . G . PASS END=8420743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 8420744 . C . PASS END=8420748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 8420749 . G . LowGQ END=8420750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,327:3,0,255:9,0 chr1 8420751 . A . PASS END=8420752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,319:0,19,255:10,0 chr1 8420753 . C . PASS END=8420753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,272:0,3,255:8,0 chr1 8420754 . T . PASS END=8420760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 8420761 . T . PASS END=8420761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:9,0 chr1 8420762 . G . PASS END=8420763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 8420764 . G . PASS END=8420765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:13:10:0,13,302:0,13,255:9,0 chr1 8420766 . G . PASS END=8420766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 8420767 . T . PASS END=8420767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,260:0,16,255:10,0 chr1 8420768 . G . PASS END=8420769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 8420770 . T . PASS END=8420770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 8420771 . A . PASS END=8420773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 8420774 . C . LowGQ END=8420774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:11,0 chr1 8420775 . G . PASS END=8420781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 8420782 . T . PASS END=8420782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 8420783 . G . PASS END=8420788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 8420789 . G . PASS END=8420789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 8420790 . G . PASS END=8420790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 8420791 . G . PASS END=8420792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 8420793 . A . PASS END=8420794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 8420795 . G . PASS END=8420821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,604:0,48,255:18,0 chr1 8420822 . C . PASS END=8420822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 8420823 . T . PASS END=8420825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 8420826 . C . PASS END=8420833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 8420834 . C . PASS END=8420835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,828:0,53,255:22,0 chr1 8420836 . G . PASS END=8420844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:24,0 chr1 8420845 . G . PASS END=8420845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 8420846 . C . PASS END=8420853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr1 8420854 . A . PASS END=8420859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 8420860 . A . PASS END=8420860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,891:0,64,255:26,0 chr1 8420861 . G . PASS END=8420866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 8420867 . C . PASS END=8420915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,64,255:26,0 chr1 8420916 . G . PASS END=8420917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,800:0,55,255:21,0 chr1 8420918 . G . PASS END=8420927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 8420928 . T . PASS END=8420928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 8420929 . G . PASS END=8420936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 8420937 . T . PASS END=8420937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:20,0 chr1 8420938 . G . PASS END=8420950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 8420951 . A . PASS END=8420958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:19,0 chr1 8420959 . G . PASS END=8421006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 8421007 . G . PASS END=8421007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 8421008 . G . PASS END=8421009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 8421010 . C . PASS END=8421010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 8421011 . G . PASS END=8421013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 8421014 . T . PASS END=8421014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 8421015 . G . PASS END=8421015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 8421016 . G . PASS END=8421019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 8421020 . C . PASS END=8421020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 8421021 . T . PASS END=8421022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 8421023 . A . PASS END=8421023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 8421024 . C . PASS END=8421034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 8421035 . G . PASS END=8421035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr1 8421036 . G . PASS END=8421041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,684:0,57,255:19,0 chr1 8421042 . G . PASS END=8421043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 8421044 . A . PASS END=8421044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:20,0 chr1 8421045 . T . PASS END=8421048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 8421049 . A . PASS END=8421049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 8421050 . G . PASS END=8421054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8421055 . C . PASS END=8421076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:23,0 chr1 8421077 . A . PASS END=8421077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:21,0 chr1 8421078 . G . PASS END=8421091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,856:0,61,255:26,0 chr1 8421092 . C T, 49.10 PASS DP=26;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=2.874;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:9,7,0:5,4,0:48:84,0,50,348,501,849:255,0,255:14,0:4.9095e+01,7.5329e-05,5.3000e+01,3.4848e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,6,5:10,4,8,3 chr1 8421093 . G . PASS END=8421129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,939:0,78,255:26,0 chr1 8421130 . A . PASS END=8421145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:26,0 chr1 8421146 . G . PASS END=8421165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 8421166 . G . PASS END=8421167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 8421168 . A . PASS END=8421170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:28,0 chr1 8421171 . T . PASS END=8421180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:26,0 chr1 8421181 . G . PASS END=8421181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:19,0 chr1 8421182 . A . PASS END=8421188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 8421189 . G . PASS END=8421189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 8421190 . C . PASS END=8421194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 8421195 . G . PASS END=8421196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 8421197 . A . PASS END=8421197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:19,0 chr1 8421198 . G . PASS END=8421198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 8421199 . C . PASS END=8421199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 8421200 . C . PASS END=8421202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8421203 . T C, 106.73 PASS DP=20;MQ=249.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,16,0:0,4,0:57:145,60,0,738,60,738:255,63,0:0,0:1.0673e+02,5.6734e+01,9.3190e-06,4.5000e+02,9.1504e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,11:0,0,11,9 chr1 8421204 . G . PASS END=8421205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8421206 . C . PASS END=8421210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 8421211 . T . PASS END=8421211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 8421212 . A . PASS END=8421230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,712:0,44,255:19,0 chr1 8421231 . G . PASS END=8421231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 8421232 . G . PASS END=8421232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 8421233 . G . PASS END=8421240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,762:0,66,255:25,0 chr1 8421241 . G . PASS END=8421248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 8421249 . A . PASS END=8421249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:22,0 chr1 8421250 . C . PASS END=8421250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 8421251 . T . PASS END=8421251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 8421252 . G . PASS END=8421255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 8421256 . T . PASS END=8421256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 8421257 . G . PASS END=8421258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 8421259 . C . PASS END=8421259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 8421260 . A . PASS END=8421284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 8421285 . A . PASS END=8421335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,590:0,44,255:19,0 chr1 8421336 . G . PASS END=8421336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr1 8421337 . G . PASS END=8421339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 8421340 . C . PASS END=8421345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 8421346 . A . PASS END=8421348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 8421349 . C . PASS END=8421356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8421357 . T . PASS END=8421382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,630:0,40,255:19,0 chr1 8421383 . T . PASS END=8421383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 8421384 . G . PASS END=8421389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 8421390 . T . PASS END=8421391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 8421392 . C . PASS END=8421399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,596:0,48,255:16,0 chr1 8421400 . T . PASS END=8421401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 8421402 . T . PASS END=8421403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 8421404 . A . PASS END=8421419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 8421420 . G . PASS END=8421420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 8421421 . G . PASS END=8421424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 8421425 . G . PASS END=8421425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 8421426 . C . PASS END=8421426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 8421427 . T . PASS END=8421427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 8421428 . C . PASS END=8421428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 8421429 . G . PASS END=8421451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 8421452 . G . PASS END=8421452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 8421453 . T . PASS END=8421467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,607:0,51,255:17,0 chr1 8421468 . T . PASS END=8421470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 8421471 . C . PASS END=8421488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 8421489 . A . PASS END=8421489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 8421490 . C . PASS END=8421533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:18,0 chr1 8421534 . T . PASS END=8421540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 8421541 . T . PASS END=8421545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 8421546 . A . PASS END=8421550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 8421823 . C . PASS END=8421823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 8421824 . T . PASS END=8421824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 8421825 . G . PASS END=8421825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 8421826 . C . PASS END=8421826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 8421827 . G . PASS END=8421833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,989:0,87,255:30,0 chr1 8421834 . T . PASS END=8421834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:28,0 chr1 8421835 . C . PASS END=8421836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 8421837 . T . PASS END=8421837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 8421838 . C . PASS END=8421838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 8421839 . T . PASS END=8421839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,940:0,60,255:29,0 chr1 8421840 . T . PASS END=8421890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1142:0,85,255:34,0 chr1 8421891 . G . PASS END=8421928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,63,255:26,0 chr1 8421929 . T . PASS END=8421930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:20,0 chr1 8421931 . C . PASS END=8421936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:21,0 chr1 8422743 . C . PASS END=8422904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:31:0,87,1241:0,93,255:40,0 chr1 8423770 . A . PASS END=8423782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,500:0,51,255:18,0 chr1 8423783 . G . PASS END=8423788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 8423789 . A . PASS END=8423798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,626:0,43,255:19,0 chr1 8423799 . A . PASS END=8423799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,529:0,27,255:17,0 chr1 8423800 . T . PASS END=8423806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 8423807 . C . PASS END=8423810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 8423811 . G . PASS END=8423811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 8423812 . G . PASS END=8423816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr1 8423817 . G . PASS END=8423817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 8423818 . A . PASS END=8423822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 8423823 . A . PASS END=8423824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,782:0,50,255:21,0 chr1 8423825 . A . PASS END=8423825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 8423826 . A . PASS END=8423826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 8423827 . G . PASS END=8423827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 8423828 . C . PASS END=8423829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 8423830 . G . PASS END=8423830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 8423831 . C . PASS END=8423833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,839:0,58,255:20,0 chr1 8423834 . C . PASS END=8423837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 8423838 . G . PASS END=8423838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 8423839 . G . PASS END=8423839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 8423840 . A . PASS END=8423853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 8423854 . C . PASS END=8423854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 8423855 . T . PASS END=8423876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 8423877 . G C, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.952;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:4,8,0:8,7,0:48:85,0,49,536,429,966:255,0,255:11,0:5.0000e+01,6.9116e-05,5.2274e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,9,6:4,8,6,9 chr1 8423878 . A . PASS END=8423891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 8423892 . C . PASS END=8423900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,956:0,84,255:30,0 chr1 8423901 . C . PASS END=8423901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 8423902 . C . PASS END=8423914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1133:0,90,255:34,0 chr1 8423915 . C . PASS END=8423981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1210:0,86,255:38,0 chr1 8423982 . G . PASS END=8424001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 8424002 . G . PASS END=8424033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:24,0 chr1 8424034 . C . PASS END=8424034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 8424035 . T . PASS END=8424038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr1 8424039 . C G, 48.47 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=1.453;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:9,3,0:6,8,0:47:83,0,50,336,505,840:255,0,255:13,0:4.8465e+01,8.3612e-05,5.3000e+01,3.3573e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,3,8:5,10,7,4 chr1 8424040 . C . PASS END=8424044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 8424045 . A . PASS END=8424046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 8424047 . G . PASS END=8424048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 8424049 . T . PASS END=8424076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:16:0,48,553:0,48,255:19,0 chr1 8424077 . A . PASS END=8424077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 8424078 . A . PASS END=8424087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 8424088 . A . PASS END=8424088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 8424089 . G . PASS END=8424094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 8424095 . C . PASS END=8424096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 8424097 . A . PASS END=8424097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 8424098 . T . PASS END=8424114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,729:0,60,255:26,0 chr1 8424115 . C . PASS END=8424153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:39,0 chr1 8424154 . C . PASS END=8424154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:38,0 chr1 8424155 . A . PASS END=8424204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,107,1399:0,107,255:40,0 chr1 8424205 . G . PASS END=8424205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:39,0 chr1 8424206 . G . PASS END=8424315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:32:0,87,1305:0,92,255:40,0 chr1 8424806 . T . PASS END=8424825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,994:0,81,255:33,0 chr1 8424826 . C . PASS END=8424826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr1 8424827 . A . PASS END=8424829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:33:0,99,1271:0,99,255:37,0 chr1 8424830 . C . PASS END=8424830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 8424831 . G . PASS END=8424872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1335:0,81,255:40,0 chr1 8424873 . A . PASS END=8424873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:34,0 chr1 8424874 . T . PASS END=8424876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 8424877 . T . PASS END=8424877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr1 8424878 . C . PASS END=8424883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1296:0,80,255:36,0 chr1 8424884 . C . PASS END=8424884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 8424885 . T . PASS END=8424898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1227:0,88,255:35,0 chr1 8425872 . A . PASS END=8425879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 8425880 . C . PASS END=8425881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 8425882 . G . PASS END=8425886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 8425887 . G . PASS END=8425888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 8425889 . G . PASS END=8425899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr1 8425900 . T C, 45.51 PASS DP=24;MQ=250.00;MQRankSum=3.841;ReadPosRankSum=0.355;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:6,4,0:9,4,0:45:80,0,50,286,502,788:241,0,255:15,0:4.5509e+01,1.4393e-04,5.3000e+01,2.8609e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,7,1:8,7,3,5 chr1 8425901 . G . PASS END=8425909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 8425910 . G . PASS END=8425917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:31,0 chr1 8425918 . C . PASS END=8425918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 8425919 . G . PASS END=8425937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1260:0,93,255:38,0 chr1 8425938 . T . PASS END=8426028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1239:0,86,255:38,0 chr1 8426029 . C . PASS END=8426034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:25,0 chr1 8482787 . T . PASS END=8482867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,117,1800:0,117,255:40,0 chr1 8498355 . T . PASS END=8498360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 8525985 . C . PASS END=8525988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 8525989 . T . PASS END=8525989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 8525990 . C . PASS END=8526083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1260:0,85,255:40,0 chr1 8555123 . T . PASS END=8555220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1227:0,81,255:38,0 chr1 8555221 . T . PASS END=8555221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 8555222 . C . PASS END=8555222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 8557465 . C . PASS END=8557589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1111:0,84,255:40,0 chr1 8568686 . C . PASS END=8568734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,105,1462:0,108,255:40,0 chr1 8585818 . C . PASS END=8585843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,102,1800:0,102,255:40,2 chr1 8601273 . C . PASS END=8601377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:61:0,120,1800:0,182,255:40,0 chr1 8616534 . C . PASS END=8616630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:40:0,108,1585:0,110,255:40,0 chr1 8617477 . C . PASS END=8617582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,120,1800:0,122,255:40,0 chr1 8674620 . C . PASS END=8674632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 8674633 . C . PASS END=8674635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 8674636 . C . PASS END=8674639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 8674640 . C . PASS END=8674676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1058:0,84,255:40,0 chr1 8674677 . C . PASS END=8674677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:38,0 chr1 8674678 . A . PASS END=8674681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,120,1800:0,126,255:40,0 chr1 8674682 . A . PASS END=8674682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:35:45:0,35,1160:0,35,255:37,0 chr1 8674683 . G . PASS END=8674745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:33:0,93,1311:0,99,255:40,0 chr1 8684369 . C . PASS END=8684439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:60:0,120,1800:0,153,255:40,0 chr1 8716032 . C . PASS END=8716036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 8716037 . G . PASS END=8716038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 8716039 . T . PASS END=8716039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 8716040 . C . PASS END=8716283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:34:0,90,1304:0,90,255:40,4 chr1 8716284 . T . PASS END=8716284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,7:66:5:66:0,5,1822:0,5,255:40,3 chr1 8716285 . C . PASS END=8716285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,4:67:81:67:0,81,2253:0,81,255:40,3 chr1 8716286 . T . PASS END=8716286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:54:66:0,54,1898:0,54,255:40,0 chr1 8716287 . C . PASS END=8716356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:88:40:0,88,1440:0,88,255:40,0 chr1 8921419 . T . PASS END=8921467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:30:0,86,1131:0,86,255:37,0 chr1 8921468 . C . PASS END=8921468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 8921469 . T . PASS END=8921488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1003:0,87,255:30,0 chr1 8922946 . C . PASS END=8922956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:29:0,83,1172:0,83,255:32,0 chr1 8922957 . G . PASS END=8922957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr1 8922958 . T . PASS END=8923004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1349:0,92,255:36,0 chr1 8923294 . C . PASS END=8923388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,93,255:40,0 chr1 8923389 . G . PASS END=8923389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 8923390 . G . PASS END=8923390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 8923391 . G . PASS END=8923402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr1 8923950 . G . PASS END=8923970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,638:0,41,255:19,0 chr1 8923971 . G . PASS END=8923984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 8923985 . G . PASS END=8923985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 8923986 . A . PASS END=8923987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 8923988 . T . PASS END=8923995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,677:0,49,255:19,0 chr1 8923996 . G . PASS END=8923997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 8923998 . A . PASS END=8923999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 8924000 . G . PASS END=8924018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:25,0 chr1 8924019 . T . PASS END=8924027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 8924028 . T . PASS END=8924028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 8924029 . T . PASS END=8924035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1103:0,87,255:30,0 chr1 8924036 . C . PASS END=8924037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 8924038 . T . PASS END=8924101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1116:0,83,255:33,0 chr1 8924102 . C . PASS END=8924102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 8924103 . T . PASS END=8924121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1233:0,93,255:33,0 chr1 8924122 . C . PASS END=8924122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 8924123 . C . PASS END=8924135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 8924136 . T . PASS END=8924151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 8925344 . C . PASS END=8925345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 8925346 . G . PASS END=8925364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:24,0 chr1 8925365 . A . PASS END=8925365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 8925366 . C . PASS END=8925371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 8925372 . C . PASS END=8925372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 8925373 . A . PASS END=8925380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 8925381 . C . PASS END=8925381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 8925382 . A . PASS END=8925390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr1 8925391 . G . PASS END=8925391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 8925392 . G . PASS END=8925394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 8925395 . A . PASS END=8925517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1180:0,86,255:39,0 chr1 8925518 . T . PASS END=8925541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:25:0,71,886:0,71,255:25,0 chr1 8926338 . C . PASS END=8926342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 8926343 . T . PASS END=8926344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 8926345 . A . PASS END=8926345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 8926346 . T . PASS END=8926346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 8926347 . T . PASS END=8926352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:30,0 chr1 8926353 . G . PASS END=8926353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr1 8926354 . G . PASS END=8926372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,998:0,80,255:34,0 chr1 8926373 . C . PASS END=8926373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:34,0 chr1 8926374 . C . PASS END=8926375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1332:0,92,255:35,0 chr1 8926376 . T . PASS END=8926376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1228:0,72,255:36,0 chr1 8926377 . C . PASS END=8926560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1349:0,93,255:40,0 chr1 8927176 . C . PASS END=8927180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 8927181 . C . PASS END=8927182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 8927183 . G . PASS END=8927183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1007:0,48,255:26,0 chr1 8927184 . G . PASS END=8927186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 8927187 . G . PASS END=8927187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 8927188 . G . PASS END=8927238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:33,0 chr1 8927239 . C . PASS END=8927241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 8927242 . C . PASS END=8927304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,991:0,85,255:34,0 chr1 8927305 . C . PASS END=8927305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 8927306 . T . PASS END=8927309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 8928047 . A . PASS END=8928087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,128,255:40,0 chr1 8928088 . A . PASS END=8928116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:42:0,112,1470:0,112,255:40,0 chr1 8930511 . C . PASS END=8930569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,107,1443:0,107,255:40,0 chr1 8930884 . C . PASS END=8930885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:26,0 chr1 8930886 . G . PASS END=8930893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 8930894 . A . PASS END=8930894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:27,0 chr1 8930895 . G . PASS END=8930909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:32,0 chr1 8930910 . A . PASS END=8930910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:31,0 chr1 8930911 . C . PASS END=8930926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1133:0,80,255:31,0 chr1 8930927 . A . PASS END=8930928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1054:0,62,255:30,0 chr1 8930929 . G . PASS END=8930931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 8930932 . T . PASS END=8930942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,77,255:25,0 chr1 8931950 . C . PASS END=8932045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:34:0,87,1350:0,87,255:40,0 chr1 8934883 . C . PASS END=8934967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:36:0,85,1435:0,85,255:40,0 chr1 9005934 . A . PASS END=9005939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:29,0 chr1 9005940 . A . PASS END=9005940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 9005941 . G . PASS END=9005948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 9005949 . A . PASS END=9005949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:31,0 chr1 9005950 . G . PASS END=9005999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,89,255:35,0 chr1 9006000 . C . PASS END=9006020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,808:0,66,255:26,0 chr1 9006021 . T . PASS END=9006024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9009322 . A . PASS END=9009326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 9009327 . G . PASS END=9009334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr1 9009335 . C . LowGQ END=9009335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 9009336 . G . PASS END=9009368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr1 9009369 . G . PASS END=9009377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 9009378 . A . PASS END=9009378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 9009379 . G . PASS END=9009405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 9009406 . C T, 86.13 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,9,0:0,4,0:36:124,39,0,504,39,504:255,39,0:0,0:8.6128e+01,3.6128e+01,1.0596e-03,4.5000e+02,7.0898e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,8:0,0,7,6 chr1 9009407 . G . PASS END=9009407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 9009408 . A . PASS END=9009408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 9009409 . A . PASS END=9009413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 9009414 . C . PASS END=9009420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 9009421 . A . PASS END=9009421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 9009422 . C . PASS END=9009427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 9009428 . C . PASS END=9009428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 9009429 . T . PASS END=9009443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 9009444 . A C, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,12,0:0,5,0:48:136,51,0,657,51,657:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,11:0,0,7,10 chr1 9009445 . T . PASS END=9009478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:16,0 chr1 9009479 . C . PASS END=9009481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 9009482 . G . PASS END=9009482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 9009483 . G . PASS END=9009483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 9009484 . T . PASS END=9009486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 9009487 . A . PASS END=9009488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9009489 . A . PASS END=9009501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,31,255:13,0 chr1 9011482 . A . PASS END=9011499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 9011500 . T . PASS END=9011501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 9011502 . C . PASS END=9011508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 9011509 . C . PASS END=9011519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 9011520 . C . PASS END=9011529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 9011530 . A . PASS END=9011530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 9011531 . A . PASS END=9011536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 9011537 . G A, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=0.998;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,8,0:0.500,0.000:16:5,3,0:3,5,0:48:85,0,50,283,286,569:255,0,255:8,0:5.0000e+01,6.5233e-05,5.3000e+01,2.8261e+02,3.2081e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,2,4,4:5,3,3,5 chr1 9011538 . A . PASS END=9011546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr1 9011547 . G . PASS END=9011547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 9011548 . G . PASS END=9011548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 9011549 . C . PASS END=9011549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 9011550 . C . PASS END=9011551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 9011552 . A . PASS END=9011552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr1 9011553 . A . PASS END=9011555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 9011556 . C . PASS END=9011556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 9011557 . A . PASS END=9011573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr1 9011574 . T . PASS END=9011585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:23,0 chr1 9011586 . T G, 49.94 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=1.569;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:6,3,0:6,8,0:48:85,0,50,385,400,786:255,0,255:12,0:4.9943e+01,6.5751e-05,5.3000e+01,3.8544e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,8,3:5,7,4,7 chr1 9011587 . G . PASS END=9011597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,876:0,72,255:24,0 chr1 9011598 . A . PASS END=9011598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 9011599 . T . PASS END=9011604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,840:0,72,255:24,0 chr1 9011605 . A . PASS END=9011605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 9011606 . T . PASS END=9011610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 9011611 . G . PASS END=9011611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 9011612 . A . PASS END=9011623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 9011624 . A . PASS END=9011625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,890:0,62,255:25,0 chr1 9011626 . C . PASS END=9011627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9011628 . C . PASS END=9011630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 9011631 . G . PASS END=9011634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 9011635 . A . PASS END=9011670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 9011671 . G . LowGQ END=9011672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,635:0,0,255:19,0 chr1 9011673 . C . PASS END=9011674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9011675 . T . LowGQ END=9011675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,554:3,0,255:19,0 chr1 9011676 . A . PASS END=9011677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 9011678 . G . LowGQ END=9011678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,681:3,0,255:17,0 chr1 9011679 . G . PASS END=9011679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr1 9011680 . A . PASS END=9011681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9011682 . G . PASS END=9011682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr1 9011683 . A . PASS END=9011684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9011685 . A . PASS END=9011685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9011686 . A . PASS END=9011689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,603:0,46,255:19,0 chr1 9011690 . C . PASS END=9011691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9011692 . C . PASS END=9011721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,675:0,44,255:19,0 chr1 9011722 . G T, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,3,0:0,14,0:48:136,51,0,650,51,650:255,51,0:0,0:9.8162e+01,4.8162e+01,6.6269e-05,4.5000e+02,8.2932e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,11:0,0,10,7 chr1 9011723 . C . PASS END=9011731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 9011732 . T . PASS END=9011738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 9011739 . G . PASS END=9011754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:7:0,21,241:0,21,241:9,0 chr1 9011755 . T . PASS END=9011759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 9011760 . T . PASS END=9011762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 9017196 . T . PASS END=9017202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 9017203 . C . PASS END=9017203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 9017204 . A . PASS END=9017208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr1 9017209 . G . PASS END=9017209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 9017210 . C . PASS END=9017215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 9017216 . A . PASS END=9017219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9017220 . T . PASS END=9017220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,897:0,67,255:26,0 chr1 9017221 . G . PASS END=9017319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1041:0,87,255:40,0 chr1 9017320 . G . PASS END=9017328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,77,255:23,0 chr1 9017329 . C . PASS END=9017344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 9018969 . A . PASS END=9018970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1266:0,105,255:35,0 chr1 9018971 . T . PASS END=9018971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:34,0 chr1 9018972 . C . PASS END=9018986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,101,1296:0,101,255:38,0 chr1 9018987 . A . PASS END=9018987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 9018988 . A . PASS END=9019061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:38:0,95,1346:0,95,255:40,0 chr1 9022646 . G . PASS END=9022715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:54:0,120,1800:0,136,255:40,0 chr1 9027718 . G . PASS END=9027875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1150:0,96,255:40,0 chr1 9030926 . G . PASS END=9030943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,637:0,54,255:19,0 chr1 9030944 . T . PASS END=9030948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr1 9030949 . A . PASS END=9030949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 9030950 . C . PASS END=9030958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,686:0,60,255:21,0 chr1 9030959 . C . PASS END=9030959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 9030960 . G . PASS END=9030960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9030961 . C . PASS END=9030961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 9030962 . A . PASS END=9030962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:19,0 chr1 9030963 . A . PASS END=9030966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 9030967 . G . PASS END=9030967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:21,0 chr1 9030968 . A . PASS END=9030969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,771:0,69,255:23,0 chr1 9030970 . C . PASS END=9030970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 9030971 . A . PASS END=9030975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 9030976 . C . PASS END=9030976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr1 9030977 . A . PASS END=9030977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:21,0 chr1 9030978 . A . PASS END=9030984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 9030985 . C . PASS END=9030987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,772:0,42,255:21,0 chr1 9030988 . C . PASS END=9030988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:20,0 chr1 9030989 . A . PASS END=9030990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 9030991 . G . PASS END=9030991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 9030992 . A . PASS END=9030993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9030994 . C . PASS END=9030994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 9030995 . C . PASS END=9030995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 9030996 . A . PASS END=9030997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 9030998 . C . PASS END=9031001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 9031002 . T . PASS END=9031003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,754:0,38,255:20,0 chr1 9031004 . A . PASS END=9031010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 9031011 . G . PASS END=9031029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:15:0,45,527:0,45,255:18,0 chr1 9031030 . C . PASS END=9031030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 9031031 . C . PASS END=9031032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9031033 . G . PASS END=9031033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,466:0,14,255:13,0 chr1 9031034 . A . PASS END=9031036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 9031037 . C . PASS END=9031037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr1 9031038 . A . PASS END=9031040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 9034262 . A . PASS END=9034283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,852:0,61,255:26,0 chr1 9034284 . G . PASS END=9034286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 9034287 . A . PASS END=9034287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 9034288 . T . PASS END=9034290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 9034385 . A . PASS END=9034420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,120,1800:0,123,255:40,0 chr1 9034421 . G A, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.086;ReadPosRankSum=3.663;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,28,0:0.549,0.000:51:14,11,0:9,17,0:48:85,0,49,985,815,1800:255,0,255:22,0:5.0000e+01,6.9893e-05,5.2161e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,14,14:6,17,17,11 chr1 9034422 . G . PASS END=9034458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,130,255:40,0 chr1 9034459 . A . PASS END=9034503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:41:0,90,1350:0,115,255:40,0 chr1 9034681 . A . PASS END=9034763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:75:0,120,1800:0,181,255:40,0 chr1 9052739 . T . PASS END=9052748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,650:0,54,255:18,0 chr1 9052749 . G . PASS END=9052774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,640:0,60,255:26,0 chr1 9052775 . C . PASS END=9052814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1119:0,84,255:36,0 chr1 9052815 . A . PASS END=9052815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr1 9052816 . G . PASS END=9052847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:34,0 chr1 9052848 . T . PASS END=9052856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 9052857 . G . PASS END=9052876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:31,0 chr1 9052877 . A . PASS END=9052879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 9052880 . C . PASS END=9052880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 9052881 . C . PASS END=9052881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 9052882 . C . PASS END=9052886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 9052887 . T . PASS END=9052896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 9052897 . A . PASS END=9052898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 9052899 . G . PASS END=9052899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9052900 . C . PASS END=9052915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 9052916 . T . PASS END=9052926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 9052927 . C . PASS END=9052927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 9052928 . C . PASS END=9052928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 9052929 . A . PASS END=9052935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9052936 . A . PASS END=9052946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr1 9052947 . A . PASS END=9052952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:22:0,57,855:0,66,255:19,0 chr1 9052953 . G . PASS END=9052955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9052956 . C . PASS END=9052972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 9063359 . C . PASS END=9063361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 9063362 . A . PASS END=9063362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr1 9063363 . A . PASS END=9063368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 9063369 . G . PASS END=9063370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 9063371 . T . PASS END=9063375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9063376 . T . PASS END=9063376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9063377 . G . PASS END=9063387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:24,0 chr1 9063388 . C . PASS END=9063388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 9063389 . T . PASS END=9063394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 9063395 . A . PASS END=9063395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 9063396 . G . PASS END=9063465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,848:0,61,255:26,0 chr1 9063466 . T . PASS END=9063467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9063468 . A . PASS END=9063468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 9063469 . T . PASS END=9063472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 9063473 . C . PASS END=9063485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 9063486 . C . PASS END=9063486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 9063487 . C . PASS END=9063487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 9063488 . C . PASS END=9063497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 9063498 . G . PASS END=9063498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 9063499 . G . PASS END=9063500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 9063501 . A . PASS END=9063502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 9063503 . A . PASS END=9063516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 9063517 . A . PASS END=9063548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 9063549 . A . PASS END=9063549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,799:0,58,255:22,0 chr1 9063550 . T . PASS END=9063551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 9063552 . A . PASS END=9063552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 9063553 . T . PASS END=9063559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 9063560 . G . PASS END=9063560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 9063561 . T . PASS END=9063564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9063565 . C . PASS END=9063572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,807:0,66,255:22,0 chr1 9063573 . G . PASS END=9063577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 9064811 . C . PASS END=9064815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 9064816 . T . PASS END=9064816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 9064817 . G . PASS END=9064918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1137:0,80,255:36,0 chr1 9064919 . C . PASS END=9064931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 9064932 . A . PASS END=9064938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,765:0,42,255:21,0 chr1 9067369 . T . PASS END=9067371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 9067372 . G . PASS END=9067381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 9067382 . A . PASS END=9067383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 9067384 . G . PASS END=9067444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:34,0 chr1 9067546 . C . PASS END=9067566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,92,255:35,0 chr1 9067567 . T . PASS END=9067567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 9067568 . G . PASS END=9067569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 9067570 . A . PASS END=9067579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 9067580 . C . PASS END=9067580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 9067581 . T . PASS END=9067581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 9070202 . C . PASS END=9070299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:30:0,83,1111:0,83,255:40,0 chr1 9070300 . C . PASS END=9070303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 9073584 . C . PASS END=9073597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 9073598 . T . PASS END=9073599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 9073600 . A . PASS END=9073600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,956:0,56,255:28,0 chr1 9073601 . C . PASS END=9073602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 9073603 . A . PASS END=9073603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 9073604 . T . PASS END=9073604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr1 9073605 . G . PASS END=9073608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1036:0,93,255:31,0 chr1 9073609 . A . PASS END=9073609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 9073610 . C . PASS END=9073660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:34,0 chr1 9073661 . C . PASS END=9073676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:25,0 chr1 9073677 . G . PASS END=9073677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 9073678 . T . PASS END=9073678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9073679 . C . PASS END=9073693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,714:0,46,255:19,0 chr1 9073694 . T . PASS END=9073694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:15,0 chr1 9074740 . C . PASS END=9074772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr1 9074773 . G . PASS END=9074773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 9074774 . A . PASS END=9074799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,541:0,45,255:16,0 chr1 9074800 . G . PASS END=9074800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 9074801 . C . PASS END=9074802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 9074803 . C . PASS END=9074803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 9074804 . A . PASS END=9074824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,765:0,50,255:19,0 chr1 9074825 . T . PASS END=9074825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9074826 . G . PASS END=9074843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 9074844 . C . PASS END=9074844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 9074845 . C . PASS END=9074858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,474:0,42,255:14,0 chr1 9074859 . C . PASS END=9074859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 9074860 . C . PASS END=9074861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 9074862 . G . PASS END=9074862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr1 9074863 . G . PASS END=9074866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 9074867 . T . PASS END=9074867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,360:0,25,255:10,0 chr1 9074868 . C . PASS END=9074869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 9074870 . G . PASS END=9074870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:10,0 chr1 9074871 . C . PASS END=9074871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 9074872 . A . PASS END=9074872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,365:0,9,255:9,0 chr1 9074873 . C . PASS END=9074875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 9074876 . A . PASS END=9074876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 9074877 . T . PASS END=9074878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,354:0,36,255:12,0 chr1 9074879 . T . PASS END=9074879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 9074880 . C . PASS END=9074881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 9074882 . T . PASS END=9074883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 9074884 . C . PASS END=9074886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,407:0,36,255:13,0 chr1 9074887 . C . PASS END=9074887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 9074888 . T . PASS END=9074888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 9074889 . C . PASS END=9074889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 9074890 . G . PASS END=9074890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 9074891 . G . PASS END=9074891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 9074892 . C . PASS END=9074892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 9074893 . C . PASS END=9074894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 9074895 . C . PASS END=9074896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 9074897 . A . PASS END=9074897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,411:0,3,255:13,0 chr1 9074898 . T . PASS END=9074898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr1 9074899 . G . PASS END=9074900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 9074901 . C . LowGQ END=9074901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,299:24,0,255:8,0 chr1 9074902 . C . PASS END=9074908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 9074909 . C . PASS END=9074909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 9074910 . C . PASS END=9074913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 9074914 . C . PASS END=9074914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 9074915 . A . PASS END=9074915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 9074916 . G . PASS END=9074916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 9074917 . C . PASS END=9074918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 9074919 . T . PASS END=9074919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:10,0 chr1 9074920 . C . PASS END=9074921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 9074922 . T . PASS END=9074922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 9074923 . C . PASS END=9074924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 9074925 . G . LowGQ END=9074925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,294:11,0,255:8,0 chr1 9074926 . A . PASS END=9074927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 9075176 . C . PASS END=9075198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,886:0,61,255:26,0 chr1 9075199 . C . PASS END=9075202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 9075203 . T . PASS END=9075203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 9075204 . C . PASS END=9075232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:30,0 chr1 9075233 . G . PASS END=9075233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 9075234 . G . PASS END=9075247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 9075248 . T . PASS END=9075248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9075249 . C . PASS END=9075252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9075253 . A . PASS END=9075253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9075254 . G . PASS END=9075254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9075255 . C . PASS END=9075278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:26,0 chr1 9075279 . G . PASS END=9075284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9075285 . C . PASS END=9075285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr1 9075286 . A . PASS END=9075287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9075288 . A . PASS END=9075301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 9078282 . C . PASS END=9078421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1194:0,83,255:40,0 chr1 9078422 . C . PASS END=9078434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:68:27:0,68,984:0,68,255:26,0 chr1 9079268 . C . PASS END=9079274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,892:0,61,255:26,0 chr1 9079275 . G . PASS END=9079275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 9079276 . A . PASS END=9079276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 9079277 . C . PASS END=9079277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 9079278 . T . PASS END=9079278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 9079279 . C . PASS END=9079299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:31,0 chr1 9079300 . A . PASS END=9079300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:29,0 chr1 9079301 . C . PASS END=9079312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1157:0,93,255:31,0 chr1 9079313 . A . PASS END=9079313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:30,0 chr1 9079314 . A . PASS END=9079325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1082:0,93,255:32,0 chr1 9079326 . T . PASS END=9079326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:30,0 chr1 9079327 . T . PASS END=9079327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 9079328 . T . PASS END=9079328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:28,0 chr1 9079329 . G . PASS END=9079335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr1 9079336 . C . PASS END=9079336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 9079337 . C . PASS END=9079350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:30,0 chr1 9079351 . G . PASS END=9079351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 9079352 . G . PASS END=9079354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 9079355 . T . PASS END=9079375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,67,255:24,0 chr1 9079376 . T . PASS END=9079389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,698:0,44,255:19,0 chr1 9079390 . T . PASS END=9079391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9079392 . T . PASS END=9079392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9082977 . C . PASS END=9082977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 9082978 . T . PASS END=9082978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 9082979 . G . PASS END=9082984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 9082985 . G . PASS END=9082985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 9082986 . C . PASS END=9082999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 9083000 . G . PASS END=9083010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1005:0,84,255:30,0 chr1 9083011 . A . PASS END=9083011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 9083012 . T . PASS END=9083099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:30:0,90,1117:0,90,255:40,0 chr1 9083100 . C . PASS END=9083100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:34,0 chr1 9083101 . G . PASS END=9083137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1164:0,83,255:35,0 chr1 9085035 . C . PASS END=9085044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:19,0 chr1 9085045 . G . PASS END=9085088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,756:0,62,255:25,0 chr1 9085089 . A . PASS END=9085089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 9085090 . A . PASS END=9085090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 9085091 . A . PASS END=9085091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:19,0 chr1 9085092 . G . PASS END=9085095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9085096 . G . PASS END=9085096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 9085097 . C . PASS END=9085110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 9085111 . A . PASS END=9085111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 9085112 . G . PASS END=9085116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9085117 . A . PASS END=9085117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 9085118 . G . PASS END=9085125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 9085126 . T . PASS END=9085126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 9085127 . G . PASS END=9085128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 9085129 . A . PASS END=9085129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 9085130 . G . PASS END=9085133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 9086354 . C . PASS END=9086354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 9086355 . C . PASS END=9086355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 9086356 . C . PASS END=9086383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,894:0,62,255:25,0 chr1 9086384 . T . PASS END=9086384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 9086385 . C . PASS END=9086392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 9086393 . T . PASS END=9086393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 9086394 . T . PASS END=9086395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9086396 . G . PASS END=9086404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 9097645 . T . PASS END=9097848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:39:0,93,1443:0,93,255:40,0 chr1 9097956 . C . PASS END=9098008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1119:0,80,255:35,0 chr1 9098009 . T . PASS END=9098009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1174:0,56,255:31,0 chr1 9098010 . G . PASS END=9098020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:33:0,94,1235:0,94,255:34,0 chr1 9098021 . T . PASS END=9098021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:32,0 chr1 9098022 . G . PASS END=9098025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1235:0,102,255:34,0 chr1 9098026 . G . PASS END=9098026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:32,0 chr1 9098027 . C . PASS END=9098041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1158:0,85,255:34,0 chr1 9098042 . A . PASS END=9098042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 9098043 . C . PASS END=9098055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 9098056 . T . PASS END=9098059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1108:0,77,255:26,0 chr1 9098060 . T . PASS END=9098066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 9098067 . C . PASS END=9098073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:23,0 chr1 9098074 . G . PASS END=9098083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,66,255:18,0 chr1 9098490 . T . PASS END=9098563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:32:0,82,1233:0,82,255:40,0 chr1 9098564 . T . PASS END=9098564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:29,0 chr1 9098565 . C . PASS END=9098565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 9098887 . C . PASS END=9098905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:24,0 chr1 9098906 . G . PASS END=9098915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1019:0,84,255:29,0 chr1 9098916 . A . PASS END=9098916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 9098917 . G . PASS END=9098952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1210:0,90,255:38,0 chr1 9098953 . C . PASS END=9098953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 9098954 . A . PASS END=9098988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1046:0,80,255:37,0 chr1 9099611 . G . PASS END=9099630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr1 9099631 . C . PASS END=9099633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,491:0,42,255:15,0 chr1 9099634 . T . PASS END=9099634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 9099635 . C . PASS END=9099643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 9099644 . G . PASS END=9099644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 9099645 . G . PASS END=9099650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 9099651 . G . PASS END=9099659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 9099660 . T . PASS END=9099660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 9099661 . A . PASS END=9099671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 9099672 . T . PASS END=9099695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 9099696 . T . PASS END=9099704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 9099705 . T . PASS END=9099705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 9099706 . C . PASS END=9099710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr1 9099711 . T . PASS END=9099711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 9099712 . A . PASS END=9099721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,147:0,12,147:4,0 chr1 9099859 . A . PASS END=9099870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,166:0,18,166:6,0 chr1 9099871 . C . PASS END=9099892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:8,0 chr1 9099893 . A . PASS END=9099893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 9099894 . G . PASS END=9099901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 9099902 . A . PASS END=9099923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 9099924 . G . PASS END=9099924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 9099925 . C . PASS END=9099936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 9099937 . G . PASS END=9099937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 9099938 . A . PASS END=9099941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9099942 . G . PASS END=9099983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:18,0 chr1 9099984 . C . PASS END=9099984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 9099985 . C . PASS END=9100046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,619:0,41,255:19,0 chr1 9100123 . C . PASS END=9100133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,480:0,42,255:15,0 chr1 9100134 . G . PASS END=9100134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 9100135 . C . PASS END=9100136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9100137 . G . PASS END=9100137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:13,0 chr1 9100138 . C . PASS END=9100138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9100139 . T . PASS END=9100139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,427:0,28,255:13,0 chr1 9100140 . T . PASS END=9100140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:13,0 chr1 9100141 . C . PASS END=9100142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9100143 . T . PASS END=9100143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr1 9100144 . C . PASS END=9100150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9100151 . C . PASS END=9100151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9100152 . T . LowGQ END=9100155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,433:0,0,255:13,0 chr1 9100156 . T . PASS END=9100158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9100159 . G . LowGQ END=9100159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,372:13,0,255:11,0 chr1 9100160 . C . PASS END=9100161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 9100162 . G . PASS END=9100162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 9100163 . G . PASS END=9100163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 9100164 . T . PASS END=9100164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr1 9100165 . A . PASS END=9100167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 9100168 . T . PASS END=9100168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:9,0 chr1 9100169 . G . LowGQ END=9100170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:9,0 chr1 9100171 . G . PASS END=9100175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 9100176 . T . PASS END=9100176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 9100177 . C . PASS END=9100178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 9100179 . G . PASS END=9100179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 9100180 . G . PASS END=9100180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:9,0 chr1 9100181 . G . PASS END=9100184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 9100185 . A . PASS END=9100185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 9100186 . A . PASS END=9100186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 9100187 . G . PASS END=9100187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 9100188 . G . PASS END=9100195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 9100196 . A . PASS END=9100196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 9100197 . A . PASS END=9100209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 9100210 . C . LowGQ END=9100210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 9100211 . C . PASS END=9100231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,397:0,33,255:12,0 chr1 9100232 . C . PASS END=9100232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 9100233 . A . PASS END=9100242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 9100243 . G . PASS END=9100243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:10,0 chr1 9100244 . C . PASS END=9100248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 9101680 . C . PASS END=9101707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 9101708 . C . PASS END=9101809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:20:0,60,737:0,60,255:26,0 chr1 9101810 . G . PASS END=9101810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 9101811 . G . PASS END=9101811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 9101812 . G . PASS END=9101812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 9101813 . T . PASS END=9101815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 9101816 . G . PASS END=9101818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,837:0,44,255:22,0 chr1 9101819 . T . PASS END=9101819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9101820 . G . PASS END=9101820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 9101821 . C . PASS END=9101821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9101822 . T . PASS END=9101822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 9101823 . C . PASS END=9101825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 9101826 . G . PASS END=9101826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 9101827 . A . PASS END=9101827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 9101828 . G . PASS END=9101828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 9101829 . A . PASS END=9101829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 9101830 . T . PASS END=9101830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 9101831 . G . PASS END=9101832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 9101833 . C . PASS END=9101834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 9101835 . T . PASS END=9101835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 9101836 . G . PASS END=9101838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 9101839 . C . PASS END=9101839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:26,0 chr1 9101840 . T . PASS END=9101840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 9101841 . C . PASS END=9101851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:24,0 chr1 9101852 . T . PASS END=9101852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,665:0,55,255:23,0 chr1 9101853 . T . PASS END=9101887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,811:0,66,255:25,0 chr1 9101888 . A . PASS END=9101894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:20:0,44,712:0,44,255:19,0 chr1 9101895 . T . PASS END=9101898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9101899 . A . PASS END=9101899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 9101900 . A . PASS END=9101901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 9101902 . A . PASS END=9101902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 9101903 . G . PASS END=9101912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:21,0 chr1 9101913 . G . PASS END=9101913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 9101914 . C . PASS END=9101923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 9101924 . A . PASS END=9101935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:19:0,47,737:0,47,255:19,0 chr1 9101936 . C . PASS END=9101936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:17,0 chr1 9101937 . C . PASS END=9101961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,568:0,48,255:18,0 chr1 9101962 . C . PASS END=9101962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 9101963 . C . PASS END=9101963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9101964 . C . PASS END=9101964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:12,0 chr1 9101965 . T . PASS END=9101968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9101969 . T . PASS END=9101972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 9101973 . T . PASS END=9101977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:14:0,26,405:0,26,255:9,0 chr1 9101978 . A . PASS END=9101986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:10,0 chr1 9101987 . G . PASS END=9101996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 9107669 . C . PASS END=9107786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,95,255:40,0 chr1 9107787 . C . PASS END=9107793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,85,255:26,0 chr1 9109159 . C . PASS END=9109166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,841:0,61,255:25,0 chr1 9109167 . T . PASS END=9109167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 9109168 . C . PASS END=9109168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 9109169 . C . PASS END=9109169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 9109170 . T . PASS END=9109185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,816:0,61,255:26,0 chr1 9109186 . A . PASS END=9109186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:24,0 chr1 9109187 . A . PASS END=9109189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,793:0,61,255:26,0 chr1 9109190 . T . PASS END=9109191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 9109192 . T . PASS END=9109192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 9109193 . C . PASS END=9109199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9109200 . G . PASS END=9109212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr1 9109213 . G . PASS END=9109213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:19,0 chr1 9109214 . G . PASS END=9109227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 9109228 . A . PASS END=9109245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 9109246 . G . PASS END=9109246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 9109247 . A . PASS END=9109274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 9117507 . C . PASS END=9117521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1228:0,89,255:37,0 chr1 9117522 . A . PASS END=9117522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr1 9117523 . C . PASS END=9117630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1215:0,95,255:40,0 chr1 9117631 . T . PASS END=9117639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:63:30:0,63,945:0,90,255:25,0 chr1 9117640 . A . PASS END=9117640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:20,0 chr1 9117641 . A . PASS END=9117642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:20,0 chr1 9117643 . T . PASS END=9117643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:19,0 chr1 9117644 . C . PASS END=9117649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,62,255:21,0 chr1 9117650 . G . PASS END=9117650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 9117651 . T . PASS END=9117661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:21,0 chr1 9117662 . C . PASS END=9117667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 9118211 . C . PASS END=9118309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,108,1620:0,124,255:40,0 chr1 9129563 . C . PASS END=9129595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,126,255:40,0 chr1 9164478 . T . PASS END=9164480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9164481 . G . PASS END=9164481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 9164482 . G . PASS END=9164482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 9164483 . T . PASS END=9164483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:23,0 chr1 9164484 . G . PASS END=9164491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,900:0,61,255:26,0 chr1 9164492 . G . PASS END=9164492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9164493 . T . PASS END=9164494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9164495 . C . PASS END=9164508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 9164509 . T . PASS END=9164509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:27,0 chr1 9164510 . G . PASS END=9164511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 9164512 . G . PASS END=9164513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 9164514 . T . PASS END=9164517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 9164518 . T . PASS END=9164519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1063:0,52,255:27,0 chr1 9164520 . A . PASS END=9164521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 9164522 . A . PASS END=9164524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:26,0 chr1 9164525 . C . PASS END=9164528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 9164529 . T . PASS END=9164529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr1 9164530 . G . PASS END=9164530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 9164531 . G . PASS END=9164531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:30,0 chr1 9164532 . C . PASS END=9164547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1263:0,89,255:36,0 chr1 9164548 . G . PASS END=9164548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 9164549 . C . PASS END=9164558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 9164559 . G . PASS END=9164559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1233:0,61,255:34,0 chr1 9164560 . C . PASS END=9164567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1312:0,94,255:37,0 chr1 9164568 . G . PASS END=9164568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:35,0 chr1 9164569 . C . PASS END=9164604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1288:0,81,255:37,0 chr1 9164605 . C . PASS END=9164605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1222:0,62,255:31,0 chr1 9164606 . A . PASS END=9164668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1211:0,91,255:35,0 chr1 9164669 . C . PASS END=9164669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:26,0 chr1 9164670 . T . PASS END=9164693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr1 9165545 . A . PASS END=9165550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 9165551 . A . PASS END=9165551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 9165552 . A . PASS END=9165571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 9165572 . C . PASS END=9165573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 9165574 . C . PASS END=9165575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 9165576 . G . PASS END=9165578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 9165579 . G . PASS END=9165581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 9165582 . G . PASS END=9165592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:12,0 chr1 9165593 . G . PASS END=9165596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 9165597 . A . PASS END=9165597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 9165598 . G . PASS END=9165621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,548:0,44,255:19,0 chr1 9165622 . C . PASS END=9165625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 9165626 . G . PASS END=9165626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr1 9165627 . A . PASS END=9165629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 9165630 . C . PASS END=9165630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 9165631 . C . PASS END=9165642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 9165643 . G . PASS END=9165643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 9165644 . C . PASS END=9165644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9165645 . G . PASS END=9165645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 9165646 . G . PASS END=9165647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9165648 . A . PASS END=9165648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 9165649 . T . PASS END=9165660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 9165661 . T . PASS END=9165661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 9165662 . C . PASS END=9165671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:21,0 chr1 9165672 . A . PASS END=9165672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 9165673 . T . PASS END=9165684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 9165685 . G A, 50.00 PASS DP=22;MQ=249.95;MQRankSum=3.940;ReadPosRankSum=3.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,11,0:0.500,0.000:22:5,8,0:6,3,0:48:85,0,50,385,393,778:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,3.8506e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,10,4,7:7,4,3,8 chr1 9165686 . C . PASS END=9165688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 9165689 . C . PASS END=9165689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 9165690 . A . PASS END=9165692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 9165693 . C . PASS END=9165722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:19,0 chr1 9165723 . T . PASS END=9165728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 9165729 . A . PASS END=9165733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 9165734 . C . PASS END=9165738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:9,0 chr1 9165739 . G . PASS END=9165739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:8,1 chr1 9171335 . C . PASS END=9171513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:27:0,81,1003:0,81,255:40,0 chr1 9171514 . C . PASS END=9171514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:38,0 chr1 9171515 . G . PASS END=9171541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,90,255:39,0 chr1 9171542 . C . PASS END=9171548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 9188704 . C . PASS END=9188707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 9188708 . C . PASS END=9188708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 9188709 . G . PASS END=9188727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 9188728 . A . PASS END=9188728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 9188729 . G . PASS END=9188730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 9188731 . C . PASS END=9188731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 9188732 . G . PASS END=9188734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 9188735 . C . PASS END=9188735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 9188736 . T . PASS END=9188768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr1 9188769 . G . PASS END=9188785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 9188786 . C . PASS END=9188786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 9188787 . A . PASS END=9188792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 9188793 . C . PASS END=9188793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 9188794 . A . PASS END=9188794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 9188795 . C . PASS END=9188796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 9188797 . G . PASS END=9188802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 9188803 . A . PASS END=9188803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:14,0 chr1 9188804 . A . PASS END=9188819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,553:0,48,255:17,0 chr1 9188820 . G . PASS END=9188820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 9188821 . G . PASS END=9188831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 9188832 . C . PASS END=9188832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 9188833 . A . PASS END=9188851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,576:0,51,255:17,0 chr1 9188852 . A . PASS END=9188852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,488:0,1,255:13,0 chr1 9188853 . G . PASS END=9188856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 9188857 . C . PASS END=9188857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 9188858 . A . PASS END=9188860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 9188861 . A . PASS END=9188861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 9188862 . C . PASS END=9188904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,615:0,48,255:18,0 chr1 9188905 . G . PASS END=9188905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 9188906 . C . PASS END=9188906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,615:0,21,255:19,0 chr1 9188907 . C . PASS END=9188910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 9188911 . A . PASS END=9188948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 9188949 . T . PASS END=9188954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 9188955 . G . PASS END=9188964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 9188965 . T . PASS END=9188969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9188970 . C . PASS END=9188972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 9188973 . C . PASS END=9188973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9188974 . A . PASS END=9188974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 9188975 . G . PASS END=9188990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 9188991 . C . PASS END=9189002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:9,0 chr1 9189003 . G . PASS END=9189005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:10,0 chr1 9189006 . G . PASS END=9189006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 9189007 . A . PASS END=9189007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 9189008 . G . PASS END=9189008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 9189009 . C . PASS END=9189021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 9189022 . C . PASS END=9189056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 9189057 . C . PASS END=9189079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:6,0 chr1 9189080 . G . PASS END=9189085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:5,0 chr1 9189086 . T . PASS END=9189086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:6:0,6,90:0,18,233:2,0 chr1 9300055 . A . PASS END=9300077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1404:0,108,255:37,0 chr1 9303016 . A . PASS END=9303032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,201,255:40,0 chr1 9304984 . G . PASS END=9305004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,49,255:20,0 chr1 9305005 . G . PASS END=9305014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:24,0 chr1 9305015 . G . PASS END=9305015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 9305016 . C . PASS END=9305021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:25,0 chr1 9305022 . G . PASS END=9305022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 9305023 . C . PASS END=9305041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,842:0,75,255:26,0 chr1 9305042 . C . PASS END=9305047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9305048 . G . PASS END=9305055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 9305056 . G . PASS END=9305074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1100:0,84,255:31,0 chr1 9305075 . A . PASS END=9305075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:30,0 chr1 9305076 . T . PASS END=9305166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:30:0,83,1133:0,83,255:36,0 chr1 9305167 . C . PASS END=9305167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 9305168 . A . PASS END=9305168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:41:30:0,41,981:0,41,255:22,0 chr1 9305169 . G . PASS END=9305198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,64,255:24,0 chr1 9305199 . C . PASS END=9305200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9305201 . C . PASS END=9305204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 9305205 . A . PASS END=9305205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:19,0 chr1 9305206 . G . PASS END=9305208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 9305209 . G . PASS END=9305210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 9305211 . G . PASS END=9305212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 9305213 . C . PASS END=9305215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 9305216 . G . PASS END=9305256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:26,0 chr1 9305257 . G . PASS END=9305260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 9305261 . A . PASS END=9305261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr1 9305262 . T . PASS END=9305263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9305264 . G . PASS END=9305299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,74,255:26,0 chr1 9305300 . C . PASS END=9305300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 9305301 . T . PASS END=9305359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,815:0,69,255:25,0 chr1 9305360 . G . PASS END=9305361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 9305362 . C . PASS END=9305372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 9305373 . A . PASS END=9305388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,47,255:19,0 chr1 9305389 . C . PASS END=9305400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:15:0,36,540:0,45,255:13,0 chr1 9305401 . T . PASS END=9305401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 9305402 . G . PASS END=9305407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 9305408 . A . PASS END=9305428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 9305429 . C . PASS END=9305444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 9305445 . A C, 97.24 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,11,0:0,6,0:47:135,50,0,598,50,598:255,51,0:0,0:9.7244e+01,4.7244e+01,8.1800e-05,4.5000e+02,8.2014e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,8:0,0,11,6 chr1 9305446 . C . PASS END=9305482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr1 9305483 . C . PASS END=9305492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,713:0,57,255:19,0 chr1 9305493 . G . PASS END=9305502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9305503 . T . PASS END=9305504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr1 9305505 . T . PASS END=9305512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 9305513 . A . PASS END=9305513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 9305514 . A . PASS END=9305520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,809:0,66,255:24,0 chr1 9305521 . T . PASS END=9305521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 9305522 . G . PASS END=9305524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,917:0,72,255:25,0 chr1 9305525 . C . PASS END=9305525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 9305526 . A . PASS END=9305550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,895:0,62,255:26,0 chr1 9305551 . G . PASS END=9305554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 9305555 . A . PASS END=9305558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr1 9305559 . A . PASS END=9305559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9305560 . A . PASS END=9305561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 9305562 . T . PASS END=9305562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9305563 . C . PASS END=9305567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 9305568 . C . PASS END=9305568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9305569 . C . PASS END=9305573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9305574 . T . PASS END=9305577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9305578 . G . PASS END=9305587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 9305588 . A . PASS END=9305593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 9305594 . C . PASS END=9305594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:17,0 chr1 9305595 . G . PASS END=9305617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,631:0,53,255:19,0 chr1 9305618 . C . PASS END=9305619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 9305620 . G . PASS END=9305620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 9307025 . G . PASS END=9307035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:36,0 chr1 9307036 . G . PASS END=9307036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1347:0,62,255:35,0 chr1 9307037 . A . PASS END=9307142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:39:0,88,1390:0,88,255:40,0 chr1 9322118 . G . PASS END=9322122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 9322123 . A . PASS END=9322123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 9322124 . C . PASS END=9322130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:13,0 chr1 9322131 . C . PASS END=9322135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 9322136 . A . PASS END=9322136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9322137 . G . PASS END=9322143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 9322144 . G . PASS END=9322144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 9322145 . G . PASS END=9322145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9322146 . T . PASS END=9322146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr1 9322147 . G . PASS END=9322159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr1 9322160 . T . PASS END=9322161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 9322162 . C . PASS END=9322178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,529:0,42,255:16,0 chr1 9322179 . G . PASS END=9322179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 9322180 . G . PASS END=9322182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:17,0 chr1 9322183 . G . PASS END=9322183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 9322184 . T . PASS END=9322192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:18,0 chr1 9322193 . T . PASS END=9322193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 9322194 . C . PASS END=9322199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,645:0,44,255:19,0 chr1 9322200 . C . PASS END=9322201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 9322202 . T . PASS END=9322209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 9322210 . C . PASS END=9322215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9322216 . A . PASS END=9322225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 9322226 . G . PASS END=9322252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 9322253 . T . PASS END=9322253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 9322254 . T . PASS END=9322272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 9322273 . C . PASS END=9322287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 9322288 . G . PASS END=9322292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 9322293 . T . PASS END=9322296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 9322297 . G . PASS END=9322300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 9322301 . T . PASS END=9322302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 9322303 . G . PASS END=9322309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 9322310 . A . PASS END=9322310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:19,0 chr1 9322311 . C . PASS END=9322324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:17,0 chr1 9322325 . A . PASS END=9322325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:15,0 chr1 9322326 . G . PASS END=9322343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:16,0 chr1 9322344 . G . PASS END=9322344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:13,0 chr1 9322345 . C . PASS END=9322349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,582:0,34,255:13,0 chr1 9322350 . G . PASS END=9322353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 9322354 . G . PASS END=9322369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 9322370 . T . PASS END=9322381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,341:0,27,255:9,0 chr1 9322382 . T . PASS END=9322387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 9323568 . C . PASS END=9323607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,892:0,72,255:26,0 chr1 9323608 . G . PASS END=9323608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:23,0 chr1 9323609 . C . PASS END=9323614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 9323615 . A . PASS END=9323616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9323617 . C . PASS END=9323617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 9323618 . C . PASS END=9323619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9323620 . G . PASS END=9323622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9323623 . G . PASS END=9323640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr1 9323641 . C . PASS END=9323784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,815:0,64,255:26,0 chr1 9323785 . C . PASS END=9323785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 9323786 . G . PASS END=9323789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr1 9323790 . T . PASS END=9323790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 9323791 . G . PASS END=9323795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 9323796 . G . PASS END=9323796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 9323797 . C . PASS END=9323806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 9323807 . T . PASS END=9323807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 9323808 . T . PASS END=9323811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 9323812 . G . PASS END=9323812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 9323813 . C . PASS END=9323827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,839:0,69,255:23,0 chr1 9323828 . A . PASS END=9323836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,56,255:19,0 chr1 9323837 . G . PASS END=9323841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 9323842 . G . PASS END=9323846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,775:0,50,255:20,0 chr1 9323847 . G . PASS END=9323873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 9323874 . G . PASS END=9323898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 9323899 . C . PASS END=9323903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 9323904 . C . PASS END=9323905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 9323906 . G . PASS END=9323916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,815:0,66,255:22,0 chr1 9323917 . G . PASS END=9323917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,670:0,27,255:21,0 chr1 9323918 . G . PASS END=9323937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:23,0 chr1 9323938 . A . PASS END=9323938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 9323939 . T . PASS END=9323943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 9323944 . T . PASS END=9323944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 9323945 . A . PASS END=9323945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9323946 . T . PASS END=9323946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:20,0 chr1 9323947 . C . PASS END=9323956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,892:0,69,255:23,0 chr1 9323957 . C . PASS END=9323957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 9323958 . G . PASS END=9323962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 9323963 . A . PASS END=9323963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,679:0,52,255:21,0 chr1 9323964 . A . PASS END=9323983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 9323984 . A . PASS END=9323984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,682:0,22,255:18,0 chr1 9323985 . A . PASS END=9324022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,599:0,41,255:19,0 chr1 9324023 . G . PASS END=9324023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 9324024 . A . PASS END=9324038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,509:0,51,255:17,0 chr1 9324039 . A . PASS END=9324039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:13,0 chr1 9324040 . G . PASS END=9324040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 9324041 . G . PASS END=9324041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:13,0 chr1 9324042 . C . PASS END=9324043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 9324044 . C . PASS END=9324046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 9324047 . C . PASS END=9324058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:16,0 chr1 9324059 . G . PASS END=9324059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 9324060 . G . PASS END=9324063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,627:0,51,255:17,0 chr1 9324064 . A . PASS END=9324064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 9324065 . G . PASS END=9324072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,631:0,54,255:18,0 chr1 9324073 . T . PASS END=9324073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 9324074 . G . PASS END=9324136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:19,0 chr1 9324137 . C . PASS END=9324143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr1 9324144 . T . PASS END=9324175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,737:0,57,255:19,0 chr1 9324176 . G . PASS END=9324179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,662:0,57,255:19,0 chr1 9324180 . T . PASS END=9324180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 9324181 . C . PASS END=9324194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:20:0,49,753:0,49,255:19,0 chr1 9324195 . C . PASS END=9324195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9324196 . C . PASS END=9324197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9324198 . A . PASS END=9324212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,776:0,66,255:22,0 chr1 9324213 . C T, 112.75 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,12,0:0,10,0:63:151,66,0,824,66,824:255,66,0:0,0:1.1275e+02,6.2753e+01,2.3297e-06,4.5000e+02,9.7523e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,12:0,0,14,8 chr1 9324214 . G . PASS END=9324214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 9324215 . C . PASS END=9324218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 9324219 . T . PASS END=9324219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr1 9324220 . C . PASS END=9324229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 9324230 . T . PASS END=9324230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:21,0 chr1 9324231 . C . PASS END=9324231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 9324232 . C . PASS END=9324235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,914:0,72,255:24,0 chr1 9324236 . G . PASS END=9324236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 9324237 . A . PASS END=9324247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 9324248 . A . PASS END=9324248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 9324249 . A . PASS END=9324250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9324251 . C . PASS END=9324251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 9324252 . T . PASS END=9324256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 9324257 . A . PASS END=9324257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 9324258 . A . PASS END=9324258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 9324259 . T . PASS END=9324259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 9324260 . G . PASS END=9324286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,853:0,66,255:26,0 chr1 9324287 . G . PASS END=9324287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 9324288 . T . PASS END=9324288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 9324289 . G . PASS END=9324312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1111:0,82,255:32,0 chr1 9324313 . G . PASS END=9324313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 9324314 . G . PASS END=9324316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 9324317 . C . PASS END=9324317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr1 9324318 . T . PASS END=9324320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 9324321 . C . PASS END=9324321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:29,0 chr1 9324322 . G . PASS END=9324485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1133:0,80,255:40,0 chr1 9324486 . G . PASS END=9324486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1612:0,69,255:40,0 chr1 9324487 . G . PASS END=9324514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:37:0,84,1260:0,106,255:40,0 chr1 9324515 . C . PASS END=9324515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:27,0 chr1 9324516 . C . PASS END=9324533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:32,0 chr1 9324534 . G . PASS END=9324534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 9324535 . G . PASS END=9324535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:27,0 chr1 9324536 . C . PASS END=9324557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 9324558 . G . PASS END=9324569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:25,0 chr1 9324570 . A . PASS END=9324570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 9324571 . T C, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,16,0:0,9,0:72:160,75,0,932,75,932:255,75,0:0,0:1.2178e+02,7.1785e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,15:0,0,9,16 chr1 9324572 . G . PASS END=9324608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,613:0,40,255:19,0 chr1 9324609 . T . PASS END=9324611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 9324612 . A . PASS END=9324612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 9324613 . C . PASS END=9324632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,615:0,48,255:17,0 chr1 9324633 . G . PASS END=9324669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:19,0 chr1 9324670 . A G, 100.72 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,7,0:0,11,0:51:138,54,0,669,54,669:255,54,0:0,0:1.0072e+02,5.0715e+01,3.6758e-05,4.5000e+02,8.5485e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,11:0,0,8,10 chr1 9324671 . C . PASS END=9324685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,684:0,54,255:19,0 chr1 9324686 . G . PASS END=9324689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9324690 . A . PASS END=9324691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9324692 . C . PASS END=9324707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 9324708 . C . PASS END=9324729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,613:0,40,255:19,0 chr1 9324730 . C . PASS END=9324730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 9324731 . C . PASS END=9324740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 9324741 . G . PASS END=9324773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,829:0,66,255:24,0 chr1 9324774 . A . PASS END=9324774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 9324775 . G . PASS END=9324776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9324777 . T . PASS END=9324777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 9324778 . G . PASS END=9324786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 9324787 . G . PASS END=9324787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 9324788 . G . PASS END=9324868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,799:0,66,255:23,0 chr1 9324869 . G . PASS END=9324928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 9415951 . A . PASS END=9416001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1093:0,83,255:34,0 chr1 9416002 . A . PASS END=9416004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,89,255:25,0 chr1 9416005 . T . PASS END=9416006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 9416007 . C . PASS END=9416042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,74,255:26,0 chr1 9416043 . C . PASS END=9416057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:27,0 chr1 9416058 . G . PASS END=9416058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 9416059 . C . PASS END=9416062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 9416063 . A . PASS END=9416074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:26:0,65,961:0,65,255:26,0 chr1 9416075 . A . PASS END=9416078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 9416079 . G . PASS END=9416083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9416084 . C . PASS END=9416109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1131:0,80,255:32,0 chr1 9416110 . C . PASS END=9416110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr1 9416111 . A . PASS END=9416113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 9416114 . C . PASS END=9416150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1126:0,83,255:34,0 chr1 9416151 . G A, 45.85 PASS DP=35;MQ=250.00;MQRankSum=4.865;ReadPosRankSum=1.622;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,13,0:0.371,0.000:35:10,6,0:12,7,0:44:81,0,47,181,181,181:255,0,255:22,0:4.5854e+01,1.5635e-04,5.0000e+01,1.8062e+02,2.1539e+02,1.8363e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,13,5,8:11,11,6,7 chr1 9416152 . A . PASS END=9416156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1271:0,89,255:31,0 chr1 9416157 . G . PASS END=9416157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:30,0 chr1 9416158 . G . PASS END=9416158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 9416159 . A . PASS END=9416159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:29,0 chr1 9416160 . C . PASS END=9416170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1200:0,83,255:31,0 chr1 9416171 . T . PASS END=9416177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1059:0,60,255:26,0 chr1 9416178 . C . PASS END=9416178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 9416179 . C . PASS END=9416181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 9416182 . C . PASS END=9416188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 9416189 . T . PASS END=9416194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 9416195 . A . PASS END=9416195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 9416196 . G . PASS END=9416201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 9416202 . G . PASS END=9416221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:25,0 chr1 9416222 . T . PASS END=9416223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 9416224 . G . PASS END=9416242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,62,255:22,0 chr1 9416243 . A . PASS END=9416255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,692:0,44,255:19,0 chr1 9416256 . C . PASS END=9416265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:24,0 chr1 9416266 . A . PASS END=9416266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 9416267 . T . PASS END=9416273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,953:0,65,255:25,0 chr1 9416274 . G . PASS END=9416275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9416276 . G . PASS END=9416277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9416278 . G . PASS END=9416279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9416280 . C . PASS END=9416297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 9416298 . G . PASS END=9416298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 9416299 . G . PASS END=9416300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9416301 . G . PASS END=9416311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 9416312 . A . PASS END=9416312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 9416313 . C . PASS END=9416315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1119:0,90,255:30,0 chr1 9416316 . C . PASS END=9416321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 9416322 . G . PASS END=9416324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 9416325 . C . PASS END=9416329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,77,255:28,0 chr1 9416330 . T . PASS END=9416338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1125:0,93,255:31,0 chr1 9416339 . C . PASS END=9416339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr1 9416340 . A . PASS END=9416341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 9416342 . C . PASS END=9416342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 9416343 . C . PASS END=9416636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1169:0,80,255:40,0 chr1 9416637 . A . PASS END=9416637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr1 9416638 . C . PASS END=9416640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1367:0,117,255:39,0 chr1 9416641 . G . PASS END=9416641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 9416642 . A . PASS END=9416644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1665:0,117,255:38,0 chr1 9427507 . C . PASS END=9427521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 9427522 . T . PASS END=9427546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:15,0 chr1 9427547 . G . PASS END=9427579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,421:0,36,255:13,0 chr1 9427580 . G . PASS END=9427613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 9427614 . G . PASS END=9427621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9427622 . C . PASS END=9427634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 9599751 . A . PASS END=9599806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:18,0 chr1 9613684 . G . PASS END=9613758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:35:0,101,1241:0,101,255:40,0 chr1 9613759 . A . PASS END=9613759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1800:0,79,255:40,0 chr1 9613760 . G . PASS END=9613863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:35:0,96,1304:0,105,255:40,0 chr1 9616281 . A . PASS END=9616315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,99,1485:0,113,255:40,0 chr1 9627342 . G . PASS END=9627419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,114,1761:0,114,255:40,0 chr1 9630316 . G . PASS END=9630416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,144,255:40,0 chr1 9633404 . C . PASS END=9633433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:102:0,120,1800:0,209,255:40,0 chr1 9633434 . T . PASS END=9633470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,3:113:99:109:0,120,1800:0,228,255:40,0 chr1 9640012 . A . PASS END=9640015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 9640016 . A . PASS END=9640016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 9640017 . G . PASS END=9640019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 9640020 . G . PASS END=9640033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1164:0,84,255:31,0 chr1 9640034 . A . PASS END=9640034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 9640035 . A . PASS END=9640048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1141:0,86,255:35,0 chr1 9640049 . G . PASS END=9640049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr1 9640050 . C . PASS END=9640092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1149:0,80,255:35,0 chr1 9640093 . A . PASS END=9640093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:25,0 chr1 9640094 . G . PASS END=9640097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 9640098 . T . PASS END=9640099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 9640100 . A . PASS END=9640100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9640101 . C . PASS END=9640102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9640103 . G . PASS END=9640109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 9640110 . A . PASS END=9640126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,77,255:26,0 chr1 9640127 . A . PASS END=9640128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 9640129 . T . PASS END=9640129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr1 9640130 . A . PASS END=9640142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1247:0,89,255:34,0 chr1 9640143 . C . PASS END=9640143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 9640144 . T . PASS END=9640168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1189:0,86,255:33,0 chr1 9640169 . C . PASS END=9640169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr1 9640170 . T . PASS END=9640172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 9640173 . A . PASS END=9640173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:31,0 chr1 9640174 . A . PASS END=9640185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:32,0 chr1 9640186 . A . PASS END=9640186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:29,0 chr1 9640187 . G . PASS END=9640195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1133:0,90,255:30,0 chr1 9640196 . G . PASS END=9640196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 9640197 . C . PASS END=9640202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 9640203 . G . PASS END=9640203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:26,0 chr1 9640204 . G . PASS END=9640204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 9640205 . A . PASS END=9640205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 9640206 . C . PASS END=9640209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 9640210 . G . PASS END=9640210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 9640211 . A . PASS END=9640211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 9640212 . A . PASS END=9640212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 9640213 . A . PASS END=9640213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 9640214 . A . PASS END=9640214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 9640215 . A . PASS END=9640216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:27,0 chr1 9640217 . T . PASS END=9640218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 9640219 . C . PASS END=9640219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 9640220 . A . PASS END=9640222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:28,0 chr1 9640223 . A . PASS END=9640223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 9640224 . G . PASS END=9640224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 9640225 . T . PASS END=9640226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9640227 . T . PASS END=9640228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 9640229 . T . PASS END=9640229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:27,0 chr1 9640230 . T . PASS END=9640236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1063:0,84,255:28,0 chr1 9640237 . T . PASS END=9640237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:26,0 chr1 9640238 . A . PASS END=9640239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9640240 . G . PASS END=9640251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 9640252 . T . PASS END=9640252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,832:0,51,255:21,0 chr1 9640253 . C . PASS END=9640285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,61,255:25,0 chr1 9640286 . C . PASS END=9640292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9642357 . A . PASS END=9642358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 9642359 . G . PASS END=9642374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1124:0,87,255:36,0 chr1 9642375 . T . PASS END=9642375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 9642376 . C . PASS END=9642386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1311:0,87,255:40,0 chr1 9642387 . G . PASS END=9642423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,108,1651:0,108,255:40,0 chr1 9642424 . G C, 50.00 PASS DP=51;MQ=143.86;MQRankSum=1.536;ReadPosRankSum=3.175;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,26,0:0.510,0.000:51:16,16,0:9,10,0:48:85,0,50,901,886,1787:255,0,255:24,0:5.0000e+01,6.5233e-05,5.2975e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,14,12:11,14,16,10 chr1 9642425 . G . PASS END=9642461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,137,255:40,0 chr1 9642462 . G . PASS END=9642536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1148:0,88,255:40,0 chr1 9642537 . T . PASS END=9642541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,77,255:24,0 chr1 9642542 . G . PASS END=9642548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:42:25:0,42,630:0,75,255:19,0 chr1 9642549 . G . PASS END=9642551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:33:25:0,33,495:0,75,255:13,0 chr1 9642552 . C . PASS END=9642559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:15:0,27,405:0,45,255:9,0 chr1 9648989 . A . PASS END=9649033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,790:0,62,255:26,0 chr1 9649034 . C . PASS END=9649034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 9649035 . T . PASS END=9649038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9649039 . C . PASS END=9649078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,49,255:19,0 chr1 9649079 . T . PASS END=9649097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 9649098 . G . PASS END=9649101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:9,0 chr1 9655948 . G . PASS END=9655951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 9655952 . A . PASS END=9655952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 9655953 . A . PASS END=9655959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 9655960 . G . PASS END=9655960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr1 9655961 . C . PASS END=9655969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1119:0,80,255:31,0 chr1 9655970 . G . PASS END=9655970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1091:0,27,255:29,0 chr1 9655971 . T . PASS END=9655973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1111:0,82,255:32,0 chr1 9655974 . A . PASS END=9655974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,943:0,65,255:29,0 chr1 9655975 . C . PASS END=9655988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:33,0 chr1 9655989 . A . PASS END=9655989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1149:0,55,255:32,0 chr1 9655990 . C . PASS END=9655996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1251:0,102,255:34,0 chr1 9655997 . A . PASS END=9655997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:30,0 chr1 9655998 . C . PASS END=9656018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1178:0,83,255:33,0 chr1 9656019 . G . PASS END=9656019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:29,0 chr1 9656020 . C . PASS END=9656020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 9656021 . A . PASS END=9656053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,64,255:26,0 chr1 9656054 . A . PASS END=9656054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:19,0 chr1 9656055 . A . PASS END=9656058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 9656059 . C . PASS END=9656068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 9656917 . A . PASS END=9656947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:21:0,61,768:0,61,255:26,0 chr1 9656948 . A . PASS END=9656948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:24,0 chr1 9656949 . G . PASS END=9656949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 9656950 . T . PASS END=9656951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 9656952 . C . PASS END=9656958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9656959 . C . PASS END=9656959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 9656960 . A . PASS END=9656962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 9656963 . T . PASS END=9657018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,65,255:26,0 chr1 9657019 . T . PASS END=9657036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:19:0,49,745:0,49,255:19,0 chr1 9657037 . C . PASS END=9657040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9657041 . T . PASS END=9657041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9657042 . G . PASS END=9657043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 9657044 . G . PASS END=9657044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 9657045 . C . PASS END=9657052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,914:0,69,255:24,0 chr1 9657053 . G . PASS END=9657053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 9657054 . C . PASS END=9657063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,814:0,72,255:24,0 chr1 9657064 . C . PASS END=9657064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 9657065 . A . PASS END=9657068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 9657069 . C . PASS END=9657069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 9657070 . A . PASS END=9657070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9657071 . C . PASS END=9657073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 9657074 . A . PASS END=9657079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 9657080 . A . PASS END=9657080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:21,0 chr1 9657081 . G . PASS END=9657098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:23,0 chr1 9657099 . T . PASS END=9657099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 9657100 . C . PASS END=9657105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:23,0 chr1 9657106 . G . PASS END=9657106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 9657107 . A . PASS END=9657109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 9657110 . A . PASS END=9657111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr1 9658507 . G . PASS END=9658530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,676:0,51,255:19,0 chr1 9658531 . G . PASS END=9658587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,776:0,63,255:26,0 chr1 9658588 . G . PASS END=9658606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1185:0,80,255:31,0 chr1 9658607 . A . PASS END=9658667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,63,255:26,0 chr1 9658668 . C . PASS END=9658669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 9658670 . A . PASS END=9658683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:18,0 chr1 9661163 . A . PASS END=9661164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 9661165 . C . PASS END=9661187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 9661188 . C . PASS END=9661188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 9661189 . G . PASS END=9661212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:17,0 chr1 9661213 . C . PASS END=9661213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 9661214 . C . PASS END=9661216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 9661217 . G . PASS END=9661217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 9661218 . C . PASS END=9661278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:18,0 chr1 9661279 . C . PASS END=9661288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,540:0,32,255:13,0 chr1 9661289 . A . PASS END=9661309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,496:0,42,255:16,0 chr1 9661310 . C . PASS END=9661310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 9661311 . C . PASS END=9661358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 9661359 . C . PASS END=9661449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 9661450 . G . LowGQ END=9661450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:10,0 chr1 9661451 . G . PASS END=9661451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 9661452 . G . PASS END=9661452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 9661453 . C . PASS END=9661472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:11,0 chr1 9661473 . T . PASS END=9661480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 9661481 . C . PASS END=9661481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 9661482 . T . PASS END=9661512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,294:0,24,255:9,0 chr1 9662127 . G . PASS END=9662135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 9662136 . G . PASS END=9662142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 9662143 . G . PASS END=9662156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 9662157 . C . PASS END=9662182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:17,0 chr1 9662183 . A . PASS END=9662193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 9662194 . C . PASS END=9662221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:18,0 chr1 9662222 . G . PASS END=9662231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 9662232 . G . PASS END=9662232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr1 9662233 . C . PASS END=9662233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 9662234 . T . PASS END=9662250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 9662251 . T . PASS END=9662275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr1 9662276 . C . PASS END=9662280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 9662281 . G . PASS END=9662281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9662282 . C . PASS END=9662282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 9662283 . T . PASS END=9662292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 9662293 . A . PASS END=9662333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:19,0 chr1 9662334 . A . PASS END=9662348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 9662349 . A . PASS END=9662349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 9667615 . G . PASS END=9667615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 9667616 . T . PASS END=9667642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 9667643 . T . PASS END=9667648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 9667649 . A . PASS END=9667652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 9667653 . G . PASS END=9667654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9667655 . C . PASS END=9667680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 9667681 . T . PASS END=9667699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:26,0 chr1 9667700 . T . PASS END=9667701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 9667702 . T . PASS END=9667702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 9667703 . C . PASS END=9667717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 9667718 . C . PASS END=9667718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:25,0 chr1 9667719 . C . PASS END=9667747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:32,0 chr1 9667748 . C . PASS END=9667748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 9667749 . A . PASS END=9667794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1130:0,80,255:38,0 chr1 9667795 . C . PASS END=9667795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 9667796 . C . PASS END=9667813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1134:0,85,255:35,0 chr1 9667814 . T . PASS END=9667814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:30,0 chr1 9667815 . C . PASS END=9667820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1224:0,83,255:33,0 chr1 9667821 . G . PASS END=9667822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 9667823 . A . PASS END=9667826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:27,0 chr1 9667827 . T . PASS END=9667844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,913:0,65,255:26,0 chr1 9667845 . C . PASS END=9667845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 9667846 . A . PASS END=9667846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:18,0 chr1 9667847 . G . PASS END=9667847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 9669898 . A . PASS END=9669902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 9669903 . G . PASS END=9669907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 9669908 . T . PASS END=9669908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 9669909 . C . PASS END=9669931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1155:0,80,255:31,0 chr1 9669932 . A . PASS END=9669932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 9669933 . T . PASS END=9669941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1089:0,82,255:29,0 chr1 9669942 . T . PASS END=9669942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1088:0,47,255:30,0 chr1 9669943 . C . PASS END=9669943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:31,0 chr1 9669944 . T . PASS END=9669944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1147:0,47,255:30,0 chr1 9669945 . C . PASS END=9669945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,0 chr1 9669946 . G . PASS END=9669946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 9669947 . A . PASS END=9669947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:30,0 chr1 9669948 . T . PASS END=9669953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1105:0,93,255:31,0 chr1 9669954 . G . PASS END=9669955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1094:0,63,255:29,0 chr1 9669956 . G . PASS END=9669959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 9669960 . C . PASS END=9669960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:28,0 chr1 9669961 . C . PASS END=9669969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1072:0,90,255:30,0 chr1 9670564 . A . PASS END=9670575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 9670576 . T . PASS END=9670577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 9670578 . C . PASS END=9670582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 9670583 . G . PASS END=9670588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 9670589 . C . PASS END=9670592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 9670593 . C . PASS END=9670593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:10,0 chr1 9670594 . C . PASS END=9670598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 9670599 . T . PASS END=9670600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,360:0,22,255:12,0 chr1 9670601 . C . PASS END=9670608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,421:0,39,255:13,0 chr1 9670609 . C . PASS END=9670615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 9670616 . A . PASS END=9670616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 9670617 . G . PASS END=9670625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:15,0 chr1 9670626 . G . PASS END=9670626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 9670627 . T . PASS END=9670627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 9670628 . G . PASS END=9670628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 9670629 . G . PASS END=9670636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 9670637 . G . PASS END=9670637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr1 9670638 . G . PASS END=9670640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:16,0 chr1 9670641 . G . PASS END=9670641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 9670642 . C . PASS END=9670646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9670647 . A . PASS END=9670655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,32,255:12,0 chr1 9670656 . T . PASS END=9670656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:9,0 chr1 9670657 . C . PASS END=9670680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 9670681 . T . PASS END=9670681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 9670682 . C . PASS END=9670684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 9670685 . C . PASS END=9670687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9670688 . T . PASS END=9670689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 9670690 . C . PASS END=9670734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:17,0 chr1 9670735 . C . PASS END=9670735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 9670736 . C . PASS END=9670736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 9670737 . C . PASS END=9670739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 9670740 . G . PASS END=9670756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 9670757 . G . PASS END=9670757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 9670758 . C . PASS END=9670796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr1 9670797 . C . PASS END=9670798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 9670799 . C . PASS END=9670800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 9670801 . T . PASS END=9670818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:15,0 chr1 9670819 . A . PASS END=9670819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 9670820 . T . PASS END=9670833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:16,0 chr1 9670834 . C T, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,6,0:0,9,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,7:0,0,7,8 chr1 9670835 . G . PASS END=9670840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9670841 . G . PASS END=9670841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,480:0,6,255:13,0 chr1 9670842 . C . PASS END=9670843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9670844 . G . PASS END=9670863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 9671073 . T . PASS END=9671131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:51:0,120,1800:0,139,255:40,0 chr1 9671811 . A . PASS END=9671819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 9671820 . C . PASS END=9671820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 9671821 . C . PASS END=9671843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,908:0,72,255:26,0 chr1 9671844 . G . PASS END=9671882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 9671883 . A . PASS END=9671883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr1 9671884 . G . PASS END=9671914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 9671915 . A . PASS END=9671916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr1 9671917 . G . PASS END=9671919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 9671920 . C . PASS END=9671922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,709:0,49,255:17,0 chr1 9671923 . C . PASS END=9671923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,681:0,8,255:15,0 chr1 9671924 . T . PASS END=9671924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 9671925 . C . PASS END=9671925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,651:0,16,255:15,0 chr1 9671926 . G . PASS END=9671930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:17,0 chr1 9671931 . A . PASS END=9671931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:14,0 chr1 9671932 . G . PASS END=9671934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 9671935 . C . PASS END=9671935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 9671936 . G . PASS END=9671940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 9671941 . C . LowGQ END=9671941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,388:43,0,255:13,0 chr1 9671942 . T . PASS END=9671944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 9671945 . A . LowGQ END=9671945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:4,0,255:15,0 chr1 9671946 . G . PASS END=9671946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:12,0 chr1 9671947 . A . LowGQ END=9671947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,437:5,0,255:10,0 chr1 9671948 . G . PASS END=9671948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:17:0,33,495:0,35,255:10,0 chr1 9673044 . G . PASS END=9673044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9673045 . T . PASS END=9673045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 9673046 . C . PASS END=9673069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,754:0,62,255:26,0 chr1 9673070 . G . PASS END=9673075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 9673076 . C . PASS END=9673086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 9673087 . C . PASS END=9673248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:28:0,80,1133:0,80,255:40,0 chr1 9673249 . G . PASS END=9673257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:25,0 chr1 9674722 . A . PASS END=9674739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 9674740 . T . PASS END=9674740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 9674741 . C . PASS END=9674753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 9674754 . C . PASS END=9674754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 9674755 . T . PASS END=9674757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 9674758 . T . PASS END=9674758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 9674759 . C . PASS END=9674789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,662:0,47,255:19,0 chr1 9674790 . G . PASS END=9674790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9674791 . A . PASS END=9674797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 9674798 . G . PASS END=9674804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:21,0 chr1 9674805 . C . PASS END=9674805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 9674806 . A . PASS END=9674806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9674807 . T . PASS END=9674808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9674809 . C . PASS END=9674809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 9674810 . C . PASS END=9674810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:20,0 chr1 9674811 . C . PASS END=9674823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:23,0 chr1 9674824 . A . PASS END=9674824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 9674825 . C . PASS END=9674825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 9674826 . A . PASS END=9674826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 9674827 . G . PASS END=9674829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 9674830 . C . PASS END=9674830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:23,0 chr1 9674831 . C . PASS END=9674831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 9674832 . A . PASS END=9674837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:26,0 chr1 9674838 . A . PASS END=9674838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 9674839 . G . PASS END=9674854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 9674855 . G . PASS END=9674855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:23,0 chr1 9674856 . T . PASS END=9674867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,906:0,61,255:26,0 chr1 9674868 . A . PASS END=9674868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:24,0 chr1 9674869 . A . PASS END=9674875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 9674876 . C . PASS END=9674876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 9674877 . T . PASS END=9674890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,886:0,62,255:25,0 chr1 9674891 . A . PASS END=9674891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:23,0 chr1 9674892 . A . PASS END=9674894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,823:0,44,255:23,0 chr1 9674895 . G . PASS END=9674918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,878:0,61,255:25,0 chr1 9674919 . A . PASS END=9674921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:21,0 chr1 9674922 . G . PASS END=9674922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 9674923 . C . PASS END=9674925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:24:0,44,679:0,44,255:20,0 chr1 9674926 . T . PASS END=9674928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9674929 . A . PASS END=9674940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:20,0 chr1 9674941 . T . PASS END=9674943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 9674944 . C . PASS END=9674944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:18,0 chr1 9674945 . T . PASS END=9674945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9674946 . G . PASS END=9674947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9674948 . C . PASS END=9674950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,754:0,52,255:17,0 chr1 9674951 . T . PASS END=9674951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,744:0,30,255:17,0 chr1 9674952 . A . PASS END=9674962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,53,255:18,0 chr1 9674963 . T . PASS END=9674963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:13,0 chr1 9674964 . G . PASS END=9674965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 9674966 . G . PASS END=9674974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:13,0 chr1 9674975 . G . PASS END=9674975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:11,0 chr1 9674976 . C . PASS END=9674977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 9674978 . T . PASS END=9674978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr1 9674979 . T . LowGQ END=9674979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,338:11,0,255:9,0 chr1 9674980 . C . PASS END=9674981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 9674982 . A . PASS END=9674982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 9674983 . G . PASS END=9674983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 9674984 . G . PASS END=9674984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 9674985 . T . PASS END=9674986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,394:0,3,255:12,0 chr1 9674987 . G . PASS END=9674987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 9674988 . G . PASS END=9674988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 9674989 . G . PASS END=9674989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:10,0 chr1 9674990 . C . PASS END=9674990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 9674991 . A . PASS END=9674991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 9674992 . G . PASS END=9674992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:11,0 chr1 9674993 . G . PASS END=9674994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9674995 . T . LowGQ END=9674995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,421:7,0,255:12,0 chr1 9674996 . C . PASS END=9674997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 9674998 . C . PASS END=9674998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 9674999 . T . LowGQ END=9674999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,277:46,0,255:8,0 chr1 9675000 . G . PASS END=9675000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 9675001 . C . LowGQ END=9675004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,355:5,0,255:10,0 chr1 9675005 . G . PASS END=9675007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 9675008 . G . PASS END=9675009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr1 9675010 . C . PASS END=9675010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 9675011 . T . LowGQ END=9675011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,230:27,0,255:7,0 chr1 9675012 . C . PASS END=9675012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 9675013 . T . LowGQ END=9675013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,294:33,0,255:8,0 chr1 9675014 . C . PASS END=9675014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 9675015 . A . LowGQ END=9675016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,138:28,0,213:8,0 chr1 9675017 . C . PASS END=9675018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 9675019 . A . LowGQ END=9675019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,172:53,0,225:8,0 chr1 9675020 . C . PASS END=9675020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 9675021 . T G, 0.43 DRAGENSnpHardQUAL DP=10;MQ=227.93;MQRankSum=-1.589;ReadPosRankSum=1.589;FractionInformativeReads=0.800;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:6,2,0:0.250,0.000:8:1,1,0:5,1,0:10:25,0,50,43,186,228:72,0,178:5,0:4.3214e-01,1.0236e+01,6.3236e+01,5.2799e+01,2.3076e+02,2.4155e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,0,2:4,2,1,1:9675021 chr1 9675022 . T . LowGQ END=9675023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,128:17,0,200:7,0 chr1 9675024 . C . PASS END=9675024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 9675025 . T . LowGQ END=9675025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,4:11:0:11:0,0,161:33,0,194:6,0 chr1 9675026 . C . PASS END=9675026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 9675027 . T . LowGQ END=9675029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,5:11:0:11:0,0,136:33,0,194:6,0 chr1 9675030 . C . PASS END=9675031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 9675032 . T . LowGQ END=9675032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,177:20,0,197:7,0 chr1 9675033 . C . PASS END=9675033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 9675034 . T . LowGQ END=9675035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,5:10:0:10:0,0,95:36,0,148:6,0 chr1 9675036 . C . PASS END=9675036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 9675037 . A . LowGQ END=9675037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,4:11:0:11:0,0,183:33,0,216:7,0 chr1 9675038 . A C, 0.05 DRAGENSnpHardQUAL DP=10;MQ=227.93;MQRankSum=-0.747;ReadPosRankSum=0.747;FractionInformativeReads=0.800;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:7,1,0:0.125,0.000:8:1,1,0:6,0,0:20:15,0,50,36,205,241:101,0,147:6,0:4.6457e-02,1.9732e+01,7.2732e+01,5.5410e+01,2.5975e+02,2.6365e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,0,1:3,4,0,1:9675021 chr1 9675039 . C . PASS END=9675040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr1 9675041 . G . LowGQ END=9675041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,304:6,0,255:10,0 chr1 9675042 . G . PASS END=9675042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 9675043 . G . PASS END=9675043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:7,0 chr1 9675044 . G . PASS END=9675045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:21:10:0,21,315:0,22,255:9,0 chr1 9675046 . T . LowGQ END=9675047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,6:13:0:13:0,0,142:44,0,225:5,0 chr1 9675048 . C . PASS END=9675048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 9675049 . T . LowGQ END=9675049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,238:27,0,255:6,0 chr1 9675050 . G . PASS END=9675051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:10,0 chr1 9675052 . A . LowGQ END=9675052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,310:8,0,255:8,0 chr1 9675053 . G . PASS END=9675053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 9675054 . T . LowGQ END=9675054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,6:11:0:11:0,0,73:66,0,139:5,0 chr1 9675055 . G . PASS END=9675058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,297:0,19,255:11,0 chr1 9675059 . G . PASS END=9675059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,352:0,22,255:12,0 chr1 9675060 . G . PASS END=9675060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,337:0,8,255:12,0 chr1 9675061 . C . PASS END=9675061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr1 9675062 . T . LowGQ END=9675062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,208:28,0,236:9,0 chr1 9675063 . C . PASS END=9675063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:12,0 chr1 9675064 . G . PASS END=9675066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 9675067 . T . PASS END=9675067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:13,0 chr1 9675068 . T . PASS END=9675070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 9675071 . G . PASS END=9675072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9675073 . T . PASS END=9675081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 9675082 . T . PASS END=9675082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9675083 . G . PASS END=9675083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9675084 . T . PASS END=9675093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 9675094 . G . PASS END=9675105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 9675106 . G . PASS END=9675113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 9675114 . G . PASS END=9675114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 9675115 . G . PASS END=9675115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 9675116 . A . PASS END=9675116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 9675117 . T . PASS END=9675117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 9675118 . T . PASS END=9675119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 9675120 . G . PASS END=9675125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr1 9675126 . G . PASS END=9675126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 9675127 . A . PASS END=9675134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 9675135 . T . PASS END=9675135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 9675136 . G . PASS END=9675137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,635:0,18,255:17,0 chr1 9675138 . C . PASS END=9675173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,637:0,41,255:17,0 chr1 9675174 . T . PASS END=9675174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 9675175 . G . PASS END=9675189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 9675190 . G . PASS END=9675243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 9675244 . G . PASS END=9675250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 9675251 . C . PASS END=9675251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 9675252 . T . PASS END=9675252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 9675253 . G . PASS END=9675256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 9675257 . G . PASS END=9675257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 9675258 . T . PASS END=9675259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 9675260 . C . PASS END=9675260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 9675261 . T . PASS END=9675263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 9675264 . C . PASS END=9675282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 9675283 . C . PASS END=9675287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 9675288 . A . PASS END=9675288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 9675289 . G . PASS END=9675289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 9675290 . G . PASS END=9675301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 9675302 . A . PASS END=9675310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9675311 . T . PASS END=9675338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:19,0 chr1 9675339 . C . PASS END=9675340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,714:0,57,255:19,0 chr1 9675341 . G . PASS END=9675345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 9675346 . A . PASS END=9675346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 9675347 . T . PASS END=9675364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 9675365 . G . PASS END=9675365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 9675366 . G . PASS END=9675366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 9675367 . G . PASS END=9675367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 9675368 . G . PASS END=9675375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 9675376 . A G, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,12,0:0,9,0:60:148,63,0,814,63,814:255,63,0:0,0:1.1020e+02,6.0204e+01,4.1418e-06,4.5000e+02,9.4974e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,11:0,0,11,10 chr1 9675377 . G . PASS END=9675390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:22,0 chr1 9675391 . A . PASS END=9675392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9675393 . G . PASS END=9675413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 9675414 . T . PASS END=9675458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,874:0,65,255:25,0 chr1 9675459 . A . PASS END=9675459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:23,0 chr1 9675460 . A . PASS END=9675475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,992:0,75,255:26,0 chr1 9675476 . G . PASS END=9675477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9675478 . G . PASS END=9675478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 9675479 . C . PASS END=9675479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9675480 . T . PASS END=9675480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9675481 . G . PASS END=9675500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:28,0 chr1 9675501 . A . PASS END=9675519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 9675520 . G . PASS END=9675520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr1 9675521 . C . PASS END=9675530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 9682084 . A . PASS END=9682102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 9682103 . C . PASS END=9682103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr1 9682104 . A . PASS END=9682117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 9682118 . G . PASS END=9682122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 9682123 . A . PASS END=9682129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 9682130 . G . PASS END=9682147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 9682148 . G . PASS END=9682150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9682151 . C . PASS END=9682218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:23,0 chr1 9682219 . T . PASS END=9682220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 9682221 . A . PASS END=9682231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:17,0 chr1 9682232 . C . PASS END=9682257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:13,0 chr1 9682258 . A G, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,3,0:0,9,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,7:0,0,8,4 chr1 9682259 . T . PASS END=9682271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 9682272 . T . PASS END=9682291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,327:0,27,255:9,0 chr1 9682292 . A . PASS END=9682295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 9682296 . T . PASS END=9682303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:6:0,18,233:0,18,233:6,0 chr1 9770514 . A . PASS END=9770521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1094:0,84,255:36,0 chr1 9770522 . T . PASS END=9770522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 9770523 . G . PASS END=9770644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1202:0,86,255:40,0 chr1 9770645 . C . PASS END=9770646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 9770647 . T . PASS END=9770647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:41:30:0,41,989:0,41,255:23,0 chr1 9770648 . C . PASS END=9770654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,74,255:25,0 chr1 9770657 . A . PASS END=9770657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,84,255:18,0 chr1 9775596 . C . PASS END=9775596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 9775599 . C . PASS END=9775622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:19,0 chr1 9775623 . G . PASS END=9775625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9775626 . C . PASS END=9775628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,759:0,47,255:19,0 chr1 9775629 . C . PASS END=9775650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,847:0,66,255:26,0 chr1 9775651 . C . PASS END=9775651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 9775652 . C . PASS END=9775662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr1 9775663 . T . PASS END=9775663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 9775664 . G . PASS END=9775682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 9775683 . A . PASS END=9775683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 9775684 . C . PASS END=9775687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9775688 . G . PASS END=9775714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,660:0,41,255:19,0 chr1 9775715 . A . PASS END=9775715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 9775716 . C . PASS END=9775717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 9775718 . G . PASS END=9775718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 9775719 . C . PASS END=9775739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,682:0,54,255:19,0 chr1 9775740 . T . PASS END=9775740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:19,0 chr1 9775741 . T . PASS END=9775768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 9775769 . T . PASS END=9775769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 9775770 . G . PASS END=9775801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 9775802 . A . PASS END=9775804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9775805 . G . PASS END=9775827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 9775903 . G . PASS END=9775903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,626:0,60,255:20,0 chr1 9775907 . G . PASS END=9775909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 9775910 . T . PASS END=9775910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:17,0 chr1 9775911 . C . PASS END=9775917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:19,0 chr1 9775918 . T . PASS END=9775918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,620:0,21,255:19,0 chr1 9775919 . T . PASS END=9775920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 9775921 . G . PASS END=9775921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:16,0 chr1 9775922 . A . PASS END=9775933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:19,0 chr1 9775934 . A . PASS END=9775934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 9775935 . C . PASS END=9775936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 9775937 . C . PASS END=9775941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 9775942 . G . PASS END=9775942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,648:0,49,255:21,0 chr1 9775943 . T . PASS END=9775943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 9775944 . G . PASS END=9775944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 9775945 . A . PASS END=9775946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9775947 . C . PASS END=9775947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:19,0 chr1 9775948 . G . PASS END=9775952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr1 9775953 . T . PASS END=9775953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9775954 . C . PASS END=9775954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:16:24:0,16,686:0,16,255:20,0 chr1 9775955 . G . PASS END=9775960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 9775961 . A . PASS END=9775964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 9775965 . G . PASS END=9775965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:19,0 chr1 9775966 . T . PASS END=9775967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9775968 . C . PASS END=9775968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:19,0 chr1 9775969 . C . PASS END=9775969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9775970 . A . PASS END=9775970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,768:0,38,255:19,0 chr1 9775971 . A . PASS END=9775971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9775972 . T . PASS END=9775972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:18,0 chr1 9775973 . T . PASS END=9775973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,712:0,11,255:19,0 chr1 9775974 . C . PASS END=9775978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 9775979 . A . PASS END=9775979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 9775980 . G . PASS END=9775984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr1 9775985 . C . PASS END=9775985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 9775986 . G . PASS END=9775992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9775993 . C . PASS END=9775996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9775997 . G . PASS END=9775997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,607:0,8,255:17,0 chr1 9775998 . G . PASS END=9775999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 9776000 . A . PASS END=9776000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:18,0 chr1 9776001 . G . PASS END=9776068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr1 9776069 . G . PASS END=9776069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 9776070 . G . PASS END=9776071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,651:0,51,255:17,0 chr1 9776072 . G . PASS END=9776072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 9776073 . G . PASS END=9776075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 9776076 . T . PASS END=9776076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:12,0 chr1 9776077 . G . PASS END=9776077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 9776078 . G . PASS END=9776086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,630:0,41,255:14,0 chr1 9776087 . G . PASS END=9776111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 9776112 . C . PASS END=9776122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 9776123 . T . PASS END=9776136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 9776498 . G . PASS END=9776514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 9776515 . G . PASS END=9776544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 9776545 . G . PASS END=9776545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 9776546 . A . PASS END=9776546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 9776547 . T . PASS END=9776547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 9776548 . G . PASS END=9776551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9776552 . T . PASS END=9776552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,455:0,26,255:12,0 chr1 9776553 . G . PASS END=9776569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 9776570 . G . PASS END=9776570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9776571 . C . PASS END=9776571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 9776572 . C . PASS END=9776575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 9776576 . G . PASS END=9776633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,491:0,45,255:16,0 chr1 9776634 . G . PASS END=9776660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 9776661 . C . PASS END=9776661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 9776662 . G . PASS END=9776668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 9776669 . C . PASS END=9776677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 9776680 . G . PASS END=9776680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 9777017 . T . PASS END=9777017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 9777018 . A . PASS END=9777018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 9777019 . C . PASS END=9777021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 9777022 . C . PASS END=9777038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 9777039 . G . PASS END=9777043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 9777044 . T . PASS END=9777045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 9777046 . G . PASS END=9777047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 9777048 . C . PASS END=9777092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:17,0 chr1 9777093 . G . PASS END=9777094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 9777095 . G . PASS END=9777104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 9777105 . G . PASS END=9777107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 9777108 . A . PASS END=9777120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:14,0 chr1 9777121 . G . PASS END=9777121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9777122 . G . PASS END=9777134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 9777135 . G . PASS END=9777135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 9777136 . T . PASS END=9777139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 9777140 . A . PASS END=9777140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 9777141 . A . PASS END=9777143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 9777144 . C . PASS END=9777144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 9777145 . A . PASS END=9777145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 9777146 . C . PASS END=9777155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 9777156 . C . PASS END=9777159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 9777160 . G . PASS END=9777160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 9777161 . A . PASS END=9777161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 9777162 . A . PASS END=9777162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr1 9777163 . G . PASS END=9777166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 9777595 . C . PASS END=9777607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr1 9777608 . C . PASS END=9777663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,598:0,40,255:19,0 chr1 9777664 . A . PASS END=9777664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:16,0 chr1 9777665 . A . PASS END=9777684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:19,0 chr1 9778752 . C . PASS END=9778760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 9778761 . C . PASS END=9778776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 9778777 . A . PASS END=9778777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 9778778 . C . PASS END=9778787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 9778788 . A . PASS END=9778790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,738:0,30,255:21,0 chr1 9778791 . C . PASS END=9778791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 9778792 . T . PASS END=9778792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:21,0 chr1 9778793 . G . PASS END=9778793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 9778794 . T . PASS END=9778794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:22,0 chr1 9778795 . G . PASS END=9778795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 9778796 . C . PASS END=9778799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 9778800 . A . PASS END=9778800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,834:0,42,255:24,0 chr1 9778801 . C . PASS END=9778801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 9778802 . G . PASS END=9778802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 9778803 . G . PASS END=9778803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:24,0 chr1 9778804 . T . PASS END=9778804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr1 9778805 . G . PASS END=9778805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 9778806 . T . PASS END=9778806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr1 9778807 . C . PASS END=9778807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:22,0 chr1 9778808 . C . PASS END=9778852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,931:0,72,255:26,0 chr1 9778853 . G . PASS END=9778853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 9778854 . C . PASS END=9778890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,945:0,72,255:25,0 chr1 9778891 . T . PASS END=9778891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 9778892 . G . PASS END=9778897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr1 9778898 . T . PASS END=9778898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:25,0 chr1 9778899 . C . PASS END=9778914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:26:0,71,1023:0,71,255:26,0 chr1 9778915 . A . PASS END=9778915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:24,0 chr1 9778916 . C . PASS END=9778925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:25,0 chr1 9778926 . G . PASS END=9778929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:53:23:0,53,774:0,53,255:20,0 chr1 9778930 . A . PASS END=9778930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9778931 . A . PASS END=9778937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 9778938 . A . PASS END=9778938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,727:0,27,255:17,0 chr1 9778939 . A . PASS END=9778941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 9778942 . C . PASS END=9778948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9778949 . C . PASS END=9778959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 9778960 . A . PASS END=9778960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:17,0 chr1 9778961 . G . PASS END=9778970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:18,0 chr1 9778971 . G . PASS END=9778971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 9778972 . C . PASS END=9778973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 9779979 . G . PASS END=9779984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 9779985 . C . PASS END=9779988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 9779989 . T . PASS END=9779989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 9779990 . T . PASS END=9780049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:25,0 chr1 9780050 . C . PASS END=9780050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 9780051 . C . PASS END=9780051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 9780052 . T . PASS END=9780059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,64,255:19,0 chr1 9780060 . T . PASS END=9780075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 9780078 . C . PASS END=9780079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 9780170 . A . PASS END=9780183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:26:0,71,970:0,71,255:26,0 chr1 9780184 . C . PASS END=9780189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 9780190 . A . PASS END=9780222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:25,0 chr1 9780223 . A . PASS END=9780226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 9780227 . A . PASS END=9780234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,1 chr1 9780235 . G . PASS END=9780241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 9780242 . T . PASS END=9780252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 9780253 . C . PASS END=9780262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 9780263 . T . PASS END=9780276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:12:0,30,450:0,36,255:11,0 chr1 9780277 . G . PASS END=9780292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,319:0,27,255:9,0 chr1 9780293 . T . PASS END=9780293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 9780294 . G . PASS END=9780300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,272:0,27,255:9,0 chr1 9780492 . C . PASS END=9780492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 9780493 . T . PASS END=9780497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 9780498 . G . PASS END=9780498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr1 9780499 . G . PASS END=9780501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 9780502 . G . PASS END=9780502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 9780503 . G . PASS END=9780505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 9780506 . G . PASS END=9780506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 9780507 . C . PASS END=9780527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,779:0,69,255:24,0 chr1 9780528 . A . PASS END=9780528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 9780529 . G . PASS END=9780530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 9780531 . C . PASS END=9780531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,796:0,39,255:22,0 chr1 9780532 . C . PASS END=9780532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 9780533 . A . PASS END=9780534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,829:0,56,255:24,0 chr1 9780535 . A . PASS END=9780535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:24,0 chr1 9780536 . G . PASS END=9780536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 9780537 . C . PASS END=9780538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 9780539 . G . PASS END=9780539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 9780540 . C . PASS END=9780553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:27,0 chr1 9780554 . C . PASS END=9780556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 9780557 . T . PASS END=9780558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1011:0,71,255:27,0 chr1 9780559 . C . PASS END=9780568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:30,0 chr1 9780569 . C . PASS END=9780569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:28,0 chr1 9780570 . G . PASS END=9780574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1163:0,80,255:29,0 chr1 9780575 . C . PASS END=9780576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 9780577 . C . PASS END=9780578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 9780579 . A . PASS END=9780582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:29:0,60,1031:0,60,255:26,0 chr1 9780583 . T . PASS END=9780583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:25,0 chr1 9780584 . G . PASS END=9780586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 9780587 . T . PASS END=9780588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 9780589 . G . PASS END=9780590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 9780591 . G . PASS END=9780598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 9780599 . G . PASS END=9780599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 9780600 . C . PASS END=9780604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,964:0,70,255:27,0 chr1 9780605 . C . PASS END=9780605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:23,0 chr1 9780606 . C . PASS END=9780606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:24,0 chr1 9780607 . T . PASS END=9780607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:23,0 chr1 9780608 . G . PASS END=9780611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr1 9780612 . G . PASS END=9780612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 9780613 . T . PASS END=9780613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:24,0 chr1 9780614 . C . PASS END=9780614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:25,0 chr1 9780615 . C . PASS END=9780616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:30:0,46,1053:0,46,255:27,0 chr1 9780617 . G . PASS END=9780617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 9780618 . C . PASS END=9780618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1124:0,52,255:30,0 chr1 9780619 . C . PASS END=9780619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1149:0,82,255:31,0 chr1 9780620 . C . PASS END=9780620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:31,0 chr1 9780621 . G . PASS END=9780624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:33,0 chr1 9780625 . T . PASS END=9780626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:33:0,66,1145:0,66,255:33,0 chr1 9780627 . G . PASS END=9780627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1341:0,95,255:35,0 chr1 9780628 . T . PASS END=9780629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:34,0 chr1 9780630 . C . PASS END=9780630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1313:0,97,255:36,0 chr1 9780631 . A . PASS END=9780631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1255:0,64,255:34,0 chr1 9780632 . G . PASS END=9780635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1305:0,83,255:36,0 chr1 9780636 . C . PASS END=9780636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 9780637 . C . PASS END=9780637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:34,0 chr1 9780638 . T . PASS END=9780638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1237:0,67,255:34,0 chr1 9780639 . G . PASS END=9780643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1307:0,83,255:36,0 chr1 9780644 . C . PASS END=9780644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:34,0 chr1 9780645 . G . PASS END=9780645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:35,0 chr1 9780646 . C . PASS END=9780646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:34,0 chr1 9780647 . T . PASS END=9780647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1230:0,47,255:33,0 chr1 9780648 . G . PASS END=9780653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:37:0,86,1319:0,86,255:38,0 chr1 9780654 . A . PASS END=9780654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1227:0,53,255:33,0 chr1 9780655 . G . PASS END=9780662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1185:0,83,255:36,0 chr1 9780663 . T . PASS END=9780663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1266:0,67,255:34,0 chr1 9780664 . T . PASS END=9780665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1296:0,94,255:37,0 chr1 9780666 . C . PASS END=9780666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:31:37:0,31,1123:0,31,255:33,0 chr1 9780667 . A . PASS END=9780668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1303:0,95,255:37,0 chr1 9780669 . A . PASS END=9780670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:64:38:0,64,1181:0,64,255:36,0 chr1 9780671 . C . PASS END=9780671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1352:0,100,255:38,0 chr1 9780672 . T . PASS END=9780672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1250:0,40,255:37,0 chr1 9780673 . T . PASS END=9780675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1325:0,84,255:40,0 chr1 9780676 . A . PASS END=9780677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1336:0,90,255:39,0 chr1 9780678 . C . PASS END=9780678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1352:0,76,255:38,0 chr1 9780679 . T . PASS END=9780683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1402:0,90,255:39,0 chr1 9780684 . C . PASS END=9780684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:36,0 chr1 9780685 . G . PASS END=9780686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1450:0,107,255:37,0 chr1 9780687 . C . PASS END=9780687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1394:0,76,255:33,0 chr1 9780688 . A . PASS END=9780688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1380:0,90,255:33,0 chr1 9780689 . C . PASS END=9780689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1376:0,76,255:32,0 chr1 9780690 . A . PASS END=9780690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1238:0,51,255:30,0 chr1 9780691 . G . PASS END=9780693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1325:0,84,255:33,0 chr1 9780694 . A . PASS END=9780694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:36:39:0,36,1149:0,36,255:29,0 chr1 9780695 . G . PASS END=9780695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,102,1530:0,104,255:33,0 chr1 9780696 . T . PASS END=9780696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:29:39:0,29,1186:0,29,255:30,0 chr1 9780697 . G . PASS END=9780699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1246:0,94,255:34,0 chr1 9780700 . T . PASS END=9780700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1128:0,42,255:29,0 chr1 9780701 . G . PASS END=9780701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 9780702 . C . PASS END=9780702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1088:0,36,255:30,0 chr1 9780703 . A . PASS END=9780703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:3:36:0,3,1029:0,3,255:27,0 chr1 9780704 . T . PASS END=9780705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1221:0,91,255:31,0 chr1 9780706 . T . PASS END=9780706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1141:0,44,255:29,0 chr1 9780707 . C . PASS END=9780708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:75:36:0,75,1247:0,75,255:31,0 chr1 9780709 . C . PASS END=9780709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 9780710 . C . PASS END=9780710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1115:0,45,255:29,0 chr1 9780711 . G . PASS END=9780711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 9780712 . A . PASS END=9780712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:25:36:0,25,976:0,25,255:28,0 chr1 9780713 . G . PASS END=9780713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 9780714 . G . PASS END=9780714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:32,0 chr1 9780715 . A . PASS END=9780715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:22:35:0,22,1006:0,22,255:26,0 chr1 9780716 . G . PASS END=9780717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 9780718 . A . PASS END=9780718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:25:36:0,25,1075:0,25,255:27,0 chr1 9780719 . G . PASS END=9780719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 9780800 . C . PASS END=9780817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1013:0,87,255:30,0 chr1 9780818 . A . PASS END=9780818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 9780819 . T . PASS END=9780831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 9780832 . G . PASS END=9780832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 9780833 . G . PASS END=9780967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1131:0,80,255:40,0 chr1 9781176 . T . PASS END=9781176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9781183 . A . PASS END=9781184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 9781185 . A . PASS END=9781185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 9781186 . T . PASS END=9781244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,931:0,75,255:26,0 chr1 9781245 . G . PASS END=9781245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 9781246 . A . PASS END=9781246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1023:0,38,255:26,0 chr1 9781247 . C . PASS END=9781255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 9781256 . C . PASS END=9781256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:28,0 chr1 9781257 . C . PASS END=9781259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 9781260 . G . PASS END=9781260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9781261 . A . PASS END=9781261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:25,0 chr1 9781262 . T . PASS END=9781266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1108:0,74,255:26,0 chr1 9781267 . A . PASS END=9781267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:24,0 chr1 9781268 . C . PASS END=9781270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 9781271 . A . PASS END=9781278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,962:0,81,255:27,0 chr1 9781279 . T . PASS END=9781279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 9781280 . C . PASS END=9781280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 9781281 . G . PASS END=9781281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 9781282 . C . PASS END=9781286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 9781287 . A . PASS END=9781287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:25,0 chr1 9781288 . A . PASS END=9781306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,992:0,65,255:26,0 chr1 9781502 . G . PASS END=9781597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,88,255:39,0 chr1 9781598 . G . PASS END=9781599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 9781600 . C . PASS END=9781602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 9781603 . T . PASS END=9781603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 9781604 . G . PASS END=9781607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 9781608 . A . PASS END=9781608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 9781609 . A . PASS END=9781609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,873:0,56,255:24,0 chr1 9781610 . C . PASS END=9781616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:23,0 chr1 9781617 . A . PASS END=9781617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:21,0 chr1 9781618 . T . PASS END=9781623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 9781624 . A . PASS END=9781624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:21,0 chr1 9781625 . C . PASS END=9781629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 9781630 . T . PASS END=9781630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 9781631 . T . PASS END=9781631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9781632 . T . PASS END=9781632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr1 9781633 . T . PASS END=9781645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 9781650 . C . PASS END=9781650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9781819 . C . PASS END=9781836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr1 9781837 . G . PASS END=9781891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:24,0 chr1 9781892 . C . PASS END=9781892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9781893 . A . PASS END=9781893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:18,0 chr1 9781894 . C . PASS END=9781918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:19:0,50,765:0,50,255:19,0 chr1 9782033 . G . PASS END=9782033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:16,0 chr1 9782034 . G . PASS END=9782070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,756:0,64,255:26,0 chr1 9782071 . C . PASS END=9782074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 9782075 . A . PASS END=9782075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 9782076 . A . PASS END=9782078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 9782079 . T . PASS END=9782098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr1 9782099 . A . PASS END=9782099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 9782100 . A . PASS END=9782103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 9782104 . C . PASS END=9782112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:20:0,53,810:0,53,255:19,0 chr1 9782113 . G . PASS END=9782113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 9782114 . G . PASS END=9782132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 9782133 . T . PASS END=9782133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:14,0 chr1 9782134 . G . PASS END=9782141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 9782142 . A . PASS END=9782143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr1 9782144 . G . PASS END=9782145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 9782146 . C . PASS END=9782147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 9782148 . A . PASS END=9782150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 9782151 . T . PASS END=9782151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 9782152 . A . PASS END=9782159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 9782160 . T . PASS END=9782160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:12,0 chr1 9782161 . C . PASS END=9782162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 9782163 . C . PASS END=9782164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 9782165 . C . PASS END=9782173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 9782174 . T . PASS END=9782175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 9782176 . C . PASS END=9782176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:10,0 chr1 9782177 . C . PASS END=9782186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 9782187 . C . PASS END=9782187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 9782188 . C . PASS END=9782207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 9782208 . T . PASS END=9782208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 9782209 . C . PASS END=9782209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 9782210 . T . LowGQ END=9782210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 9782211 . G . PASS END=9782211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 9782302 . C . PASS END=9782310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:24:0,67,963:0,67,255:26,0 chr1 9782311 . G . PASS END=9782316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 9782317 . C . PASS END=9782317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 9782318 . T . PASS END=9782322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 9782323 . G . PASS END=9782323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 9782324 . G . PASS END=9782349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1105:0,90,255:32,0 chr1 9782350 . C . PASS END=9782350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 9782351 . A . PASS END=9782355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,85,255:27,0 chr1 9782356 . C . PASS END=9782357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 9782358 . G . PASS END=9782359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 9782360 . A . PASS END=9782360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 9782361 . A . PASS END=9782363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9782364 . A . PASS END=9782392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,976:0,65,255:26,0 chr1 9782393 . A . PASS END=9782393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 9782394 . T . PASS END=9782395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 9782396 . A . PASS END=9782396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 9782397 . T . PASS END=9782401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr1 9782402 . A . PASS END=9782402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 9782403 . A . PASS END=9782410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 9782411 . G . PASS END=9782411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 9782412 . A . PASS END=9782414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 9782569 . A . PASS END=9782569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1465:0,114,255:38,0 chr1 9782586 . A . PASS END=9782664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:41:0,80,1440:0,80,255:40,0 chr1 9783183 . G . PASS END=9783190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:26,0 chr1 9783191 . C . PASS END=9783192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 9783193 . T . PASS END=9783193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 9783194 . A . PASS END=9783212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1011:0,87,255:31,0 chr1 9783213 . G . PASS END=9783213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 9783214 . G . PASS END=9783331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:33:0,84,1257:0,89,255:40,0 chr1 9783332 . T . PASS END=9783334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:74:34:0,74,1170:0,74,255:28,0 chr1 9783335 . A . PASS END=9783342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 9783343 . A . PASS END=9783343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,923:0,46,255:29,0 chr1 9783344 . A . PASS END=9783344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1089:0,96,255:32,0 chr1 9783345 . C . PASS END=9783345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:31,0 chr1 9783346 . C . PASS END=9783349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:32,0 chr1 9783350 . G . PASS END=9783350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 9784027 . G . PASS END=9784045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,876:0,69,255:25,0 chr1 9784046 . A . PASS END=9784150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1032:0,81,255:40,0 chr1 9784334 . C . PASS END=9784343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:36:0,95,1341:0,95,255:36,0 chr1 9784344 . T . PASS END=9784344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1209:0,78,255:34,0 chr1 9784345 . T . PASS END=9784456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1291:0,97,255:40,0 chr1 9784457 . A . PASS END=9784457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:31,0 chr1 9784458 . A . PASS END=9784463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1202:0,86,255:32,0 chr1 9784464 . G . PASS END=9784464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:28,0 chr1 9784465 . T . PASS END=9784466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:29,0 chr1 9784467 . A . PASS END=9784467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:29,0 chr1 9784468 . G . PASS END=9784469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 9784470 . A . PASS END=9784470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:28,0 chr1 9784471 . A . PASS END=9784473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 9784474 . T . PASS END=9784474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 9784475 . G . PASS END=9784476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 9784477 . A . PASS END=9784477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1028:0,57,255:30,0 chr1 9784478 . C . PASS END=9784478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr1 9784479 . G . PASS END=9784479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:29,0 chr1 9784862 . G . PASS END=9784870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr1 9784871 . C . PASS END=9784871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 9784872 . T . PASS END=9784875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 9784876 . G . PASS END=9784878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 9784879 . A . PASS END=9784879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 9784880 . A . PASS END=9784880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 9784881 . A . PASS END=9784882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 9784883 . G . PASS END=9784889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 9784890 . A . PASS END=9784890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 9784891 . C . PASS END=9784965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,812:0,69,255:25,0 chr1 9784966 . G . PASS END=9784976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 9784977 . G . PASS END=9784977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 9784978 . A . PASS END=9784992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 9784993 . A . PASS END=9784994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 9784998 . T . PASS END=9784998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 9786967 . G . PASS END=9786984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1496:0,87,255:40,2 chr1 9786985 . A . PASS END=9786985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1512:0,60,255:40,2 chr1 9786986 . A . PASS END=9786986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1459:0,52,255:40,0 chr1 9786987 . A . PASS END=9787093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1215:0,81,255:40,0 chr1 9787094 . A . PASS END=9787098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:30:0,60,900:0,83,255:24,0 chr1 9787099 . C . PASS END=9787104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:29:0,51,765:0,87,255:18,0 chr1 9790566 . T . PASS END=9790568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 9790569 . G . PASS END=9790576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 9790577 . G . PASS END=9790611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,529:0,45,255:19,0 chr1 9790612 . G . PASS END=9790640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,747:0,63,255:26,0 chr1 9790641 . C . PASS END=9790641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 9790642 . T . PASS END=9790655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,902:0,75,255:26,0 chr1 9790656 . G . PASS END=9790656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 9790657 . C . PASS END=9790657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 9790658 . T . PASS END=9790660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:30,0 chr1 9790661 . C . PASS END=9790661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 9790662 . C . PASS END=9790682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1078:0,90,255:32,0 chr1 9790683 . A . PASS END=9790683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1011:0,63,255:30,0 chr1 9790684 . T . PASS END=9790705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1143:0,83,255:33,0 chr1 9790706 . T . PASS END=9790718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,1035:0,66,255:24,0 chr1 9790719 . T . PASS END=9790719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:23,0 chr1 9790720 . T . PASS END=9790733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,67,255:25,0 chr1 9790734 . C . PASS END=9790735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,909:0,42,255:22,0 chr1 9790736 . C . PASS END=9790739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 9790740 . A . PASS END=9790752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,49,255:19,0 chr1 9790753 . T . PASS END=9790754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:15,0 chr1 9790755 . C . PASS END=9790755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr1 9790756 . T . PASS END=9790763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 9791264 . C . PASS END=9791264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 9791265 . T . PASS END=9791276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:30,0 chr1 9791277 . A . PASS END=9791277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:29,0 chr1 9791278 . C . PASS END=9791282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1133:0,90,255:32,0 chr1 9791283 . A . PASS END=9791283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr1 9791284 . T . PASS END=9791285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1271:0,99,255:34,0 chr1 9791286 . G . PASS END=9791289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr1 9791290 . G . PASS END=9791433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:33:0,87,1305:0,92,255:40,0 chr1 9791434 . C . PASS END=9791445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,81,255:25,0 chr1 9791446 . C . PASS END=9791448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 9791819 . C . PASS END=9791819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 9791820 . T . PASS END=9791820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 9791821 . G . PASS END=9791827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,804:0,75,255:26,0 chr1 9791828 . G . PASS END=9791834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:30,0 chr1 9791835 . G . PASS END=9791835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr1 9791836 . T . PASS END=9791900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1080:0,80,255:36,0 chr1 9791901 . G . PASS END=9791901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:28,0 chr1 9791902 . G . PASS END=9791905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 9791906 . C . PASS END=9791907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:49:32:0,49,1094:0,49,255:27,0 chr1 9791908 . A . PASS END=9791910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 9791911 . T . PASS END=9791911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:28,0 chr1 9791912 . G . PASS END=9791912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 9791913 . G . PASS END=9791913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 9791914 . T . PASS END=9791914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,828:0,56,255:27,0 chr1 9791915 . T . PASS END=9791917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 9791918 . C . PASS END=9791918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 9791919 . G . PASS END=9791919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 9791920 . T . PASS END=9791920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 9791921 . G . PASS END=9791925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 9791926 . A . PASS END=9791934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 9791935 . G . PASS END=9791935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,928:0,15,255:21,0 chr1 9791936 . C . PASS END=9791950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,61,255:24,0 chr1 9791951 . T . PASS END=9791954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:16,0 chr1 9793459 . C . PASS END=9793604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1046:0,85,255:40,0 chr1 9794030 . C . PASS END=9794190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:30:0,86,1044:0,86,255:40,0 chr1 9794191 . G . PASS END=9794191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:26,0 chr1 9794192 . A . PASS END=9794197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 9794198 . G . PASS END=9794200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 9795006 . C . PASS END=9795019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 9795020 . G . PASS END=9795067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr1 9795068 . C . PASS END=9795068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 9795069 . G . PASS END=9795071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 9795072 . G . PASS END=9795072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr1 9795073 . C . PASS END=9795076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1008:0,78,255:26,0 chr1 9795077 . G . PASS END=9795080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 9795081 . A . PASS END=9795081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 9795082 . A . PASS END=9795082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 9795083 . A . PASS END=9795083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:26,0 chr1 9795084 . G . PASS END=9795089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 9795090 . C . PASS END=9795105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:26:0,75,978:0,78,255:26,0 chr1 9795106 . A . PASS END=9795106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 9795107 . A . PASS END=9795125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,895:0,78,255:26,0 chr1 9795126 . C . PASS END=9795155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,940:0,81,255:33,0 chr1 9795156 . T . PASS END=9795161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr1 9795162 . C . PASS END=9795226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1072:0,80,255:32,0 chr1 9795227 . A . PASS END=9795227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 9795228 . A . PASS END=9795230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9795231 . A . PASS END=9795231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 9795232 . C . PASS END=9795232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9795525 . T . PASS END=9795541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1134:0,83,255:33,0 chr1 9795542 . T . PASS END=9795542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1119:0,63,255:31,0 chr1 9795543 . T . PASS END=9795611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1172:0,83,255:39,0 chr1 9795612 . T . PASS END=9795612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr1 9795613 . C . PASS END=9795621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:30,0 chr1 9795622 . C . PASS END=9795622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 9795623 . G . PASS END=9795626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 9795627 . T . PASS END=9795627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:27,0 chr1 9795628 . C . PASS END=9795634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 9795635 . C . PASS END=9795635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 9795636 . T . PASS END=9795638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 9795639 . A . PASS END=9795651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,909:0,64,255:25,0 chr1 9795652 . A . PASS END=9795652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:21,0 chr1 9795653 . C . PASS END=9795661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 9795662 . G . PASS END=9795668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,75,255:18,0 chr1 9795669 . T . PASS END=9795670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:18,0 chr1 9795671 . G . PASS END=9795673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:17,0 chr1 9795943 . C . PASS END=9795948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 9795949 . G . PASS END=9795949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9795950 . C . PASS END=9795958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 9795959 . C . PASS END=9795959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,727:0,36,255:19,0 chr1 9795960 . T . PASS END=9795967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 9795968 . A . PASS END=9795968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:23,0 chr1 9795969 . G . PASS END=9795971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 9795972 . C . PASS END=9795972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 9795973 . C . PASS END=9795988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr1 9795989 . T . PASS END=9795993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 9795994 . G . PASS END=9795994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9795995 . C . PASS END=9796076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1122:0,85,255:36,0 chr1 9796077 . A . PASS END=9796077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1062:0,79,255:29,0 chr1 9796078 . C . PASS END=9796084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 9796085 . A . PASS END=9796086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 9796087 . G . PASS END=9796087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 9796088 . T . PASS END=9796100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 9797556 . C . PASS END=9797612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,112,1751:0,112,255:40,0 chr1 9801152 . C . PASS END=9801172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,798:0,62,255:26,0 chr1 9801173 . C . PASS END=9801173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:25,0 chr1 9801174 . G . PASS END=9801185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,996:0,81,255:29,0 chr1 9801186 . T . PASS END=9801186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:26:29:0,26,931:0,26,255:27,0 chr1 9801187 . A . PASS END=9801299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1109:0,90,255:37,0 chr1 9801300 . T . PASS END=9801307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:24,0 chr1 9801308 . C . PASS END=9801314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 9803942 . C . PASS END=9803945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 9803946 . T . PASS END=9803956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,915:0,64,255:26,0 chr1 9803957 . G . PASS END=9803998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1125:0,84,255:36,0 chr1 9803999 . C . PASS END=9803999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 9804000 . T . PASS END=9804038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1274:0,102,255:37,0 chr1 9804039 . A . PASS END=9804063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 9804453 . C . PASS END=9804458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,492:0,45,255:16,0 chr1 9804459 . T . PASS END=9804459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 9804460 . A . PASS END=9804479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,499:0,45,255:17,0 chr1 9804480 . T . PASS END=9804480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr1 9804481 . C . PASS END=9804483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 9804484 . C . PASS END=9804484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 9804485 . T . PASS END=9804494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,601:0,40,255:19,0 chr1 9804495 . C . PASS END=9804507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:24,0 chr1 9804508 . T . PASS END=9804508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:22,0 chr1 9804509 . C . PASS END=9804516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr1 9804517 . C . PASS END=9804585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1016:0,81,255:35,0 chr1 9804586 . G . PASS END=9804596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:28:0,77,1102:0,77,255:26,0 chr1 9804597 . C . PASS END=9804599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 9804600 . A . PASS END=9804600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr1 9804601 . C . PASS END=9804616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1080:0,90,255:30,0 chr1 9804617 . T . PASS END=9804637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,842:0,64,255:25,0 chr1 9804638 . C . PASS END=9804638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:23,0 chr1 9804639 . C . PASS END=9804659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 9804660 . C . PASS END=9804660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 9804661 . A . PASS END=9804663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9804664 . C . PASS END=9804692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:17:0,45,675:0,47,255:19,0 chr1 9804693 . C . PASS END=9804693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 9804694 . G . PASS END=9804701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 9809519 . C . PASS END=9809544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 9809545 . G . PASS END=9809549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 9809550 . G . PASS END=9809550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:21,0 chr1 9809551 . G . PASS END=9809559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr1 9809560 . T . PASS END=9809561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 9809562 . G . PASS END=9809563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:27:0,50,884:0,50,255:25,0 chr1 9809564 . A . PASS END=9809565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 9809566 . C . PASS END=9809569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 9809570 . T . PASS END=9809619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1066:0,80,255:32,0 chr1 9809620 . G . PASS END=9809620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 9809621 . G . PASS END=9809631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1095:0,80,255:32,0 chr1 9809632 . G . PASS END=9809633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 9809634 . C . PASS END=9809643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 9809644 . A . PASS END=9809644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 9809645 . T . PASS END=9809647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 9809648 . T . PASS END=9809648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:29,0 chr1 9809649 . T . PASS END=9809650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 9809651 . G . PASS END=9809675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:67:25:0,67,939:0,67,255:26,0 chr1 9809676 . C . PASS END=9809676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:22,0 chr1 9809677 . G . PASS END=9809687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 9809688 . A . PASS END=9809688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:21:23:0,21,670:0,21,255:20,0 chr1 9809689 . A . PASS END=9809690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,762:0,52,255:19,0 chr1 9809691 . C . PASS END=9809691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9809692 . C . PASS END=9809692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 9809693 . T . PASS END=9809694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 9809695 . T . PASS END=9809704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,55,255:18,0 chr1 9809822 . C . PASS END=9809967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:36:0,98,1349:0,98,255:40,0 chr1 9809968 . T . PASS END=9809971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:69:45:0,69,1035:0,135,255:24,0 chr1 9811531 . C . PASS END=9811540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 9811541 . A . PASS END=9811541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 9811542 . A . PASS END=9811552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,771:0,62,255:26,0 chr1 9811553 . C . PASS END=9811717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1260:0,90,255:40,0 chr1 9811718 . C . PASS END=9811719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 9811720 . C . PASS END=9811721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 9811722 . T . PASS END=9811739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:25,0 chr1 9815172 . T . PASS END=9815183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 9815184 . T . PASS END=9815184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 9815185 . T . PASS END=9815186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 9815187 . A . PASS END=9815187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 9815188 . C . PASS END=9815201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:26,0 chr1 9815202 . G . PASS END=9815321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1151:0,87,255:40,0 chr1 9815322 . T . PASS END=9815322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 9815323 . C . PASS END=9815341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 9815342 . G . PASS END=9815362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,833:0,61,255:26,0 chr1 9815363 . C . PASS END=9815366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 9815367 . C . PASS END=9815367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 9816539 . C . PASS END=9816568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,175,255:40,0 chr1 9833330 . C . PASS END=9833335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 9833336 . A . PASS END=9833336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 9833337 . T . PASS END=9833338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 9833339 . G . PASS END=9833339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,643:0,5,255:18,0 chr1 9833340 . C . PASS END=9833341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 9833342 . G . PASS END=9833342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 9833343 . A . PASS END=9833346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 9833347 . G . PASS END=9833347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 9833348 . C . PASS END=9833351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,742:0,66,255:22,0 chr1 9833352 . T . PASS END=9833352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr1 9833353 . T . PASS END=9833353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 9833354 . T . PASS END=9833354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 9833355 . A . PASS END=9833355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 9833356 . T . PASS END=9833356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 9833357 . C . PASS END=9833361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,892:0,66,255:24,0 chr1 9833362 . G . PASS END=9833362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 9833363 . C . PASS END=9833368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,803:0,72,255:26,0 chr1 9833369 . G . PASS END=9833369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 9833370 . T . PASS END=9833370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 9833371 . G . PASS END=9833372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 9833373 . G . PASS END=9833376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1047:0,71,255:26,0 chr1 9833377 . T . PASS END=9833383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 9833384 . G . PASS END=9833384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 9833385 . C . PASS END=9833385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 9833386 . A . PASS END=9833388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 9833389 . G . PASS END=9833397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 9833398 . T . PASS END=9833444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr1 9833445 . C . PASS END=9833447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 9833448 . G . PASS END=9833448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:15,0 chr1 9833449 . T . PASS END=9833452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:16,0 chr1 9883701 . C . PASS END=9883702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 9883703 . C . PASS END=9883713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 9883714 . G . PASS END=9883737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 9883738 . G . LowGQ END=9883791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,39:3,0 chr1 9910776 . C . PASS END=9910823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1333:0,95,255:39,0 chr1 9910824 . G . PASS END=9910834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:31:0,69,1035:0,77,255:26,0 chr1 9931245 . C . PASS END=9931335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,100,1551:0,100,255:40,0 chr1 9932027 . G . PASS END=9932027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 9932028 . T . PASS END=9932031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,904:0,84,255:28,0 chr1 9932032 . A . PASS END=9932032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 9932033 . T . PASS END=9932034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 9932035 . C . PASS END=9932035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 9932036 . C . PASS END=9932057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:30,0 chr1 9932058 . A . PASS END=9932058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 9932059 . C . PASS END=9932064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 9932065 . C . PASS END=9932065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 9932066 . C . PASS END=9932073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr1 9932074 . G . PASS END=9932088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 9932089 . C . PASS END=9932089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:22,0 chr1 9932090 . C . PASS END=9932093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr1 9932094 . C . PASS END=9932111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:18:0,53,676:0,53,255:19,0 chr1 9932112 . T . PASS END=9932112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,568:0,23,255:17,0 chr1 9932113 . C . PASS END=9932113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 9932114 . G . PASS END=9932114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 9932115 . C . PASS END=9932122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 9982313 . T . PASS END=9982323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:29,0 chr1 9982324 . G . PASS END=9982324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:27,0 chr1 9982325 . G . PASS END=9982339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1058:0,87,255:31,0 chr1 9982340 . G . PASS END=9982340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:28,0 chr1 9982341 . C . PASS END=9982365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:31,0 chr1 9982366 . T . PASS END=9982366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 9982367 . T . PASS END=9982386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1066:0,90,255:31,0 chr1 9982387 . G . PASS END=9982411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 9982412 . C . PASS END=9982416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:17,0 chr1 9990370 . T . PASS END=9990386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,149,255:40,0 chr1 9990414 . T . PASS END=9990515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,162,255:40,0 chr1 9991949 . C . PASS END=9991986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:94:40:0,94,1442:0,94,255:40,0 chr1 9991987 . G . PASS END=9992023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:44:0,83,1494:0,83,255:40,0 chr1 9992024 . C G, 49.70 PASS DP=42;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=0.588;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,19,0:0.463,0.000:41:12,8,0:10,11,0:47:84,0,47,184,184,184:255,0,255:21,0:4.9705e+01,8.9825e-05,5.0000e+01,1.8447e+02,2.1924e+02,1.8749e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,20,7,12:12,10,10,9 chr1 9992025 . A . PASS END=9992030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1386:0,90,255:38,0 chr1 9992861 . C . PASS END=9992956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:96:59:0,96,1742:0,96,255:40,2 chr1 9994820 . C . PASS END=9994918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:32:0,84,1202:0,96,255:40,0 chr1 9995550 . C . PASS END=9995685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,142,255:40,0 chr1 9996577 . C . PASS END=9996685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:68:0,120,1800:0,168,255:40,0 chr1 10002739 . C . PASS END=10002793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,148,255:40,0 chr1 10003558 . G . PASS END=10003559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 10003561 . C . PASS END=10003561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 10003573 . G . PASS END=10003573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 10003577 . A . PASS END=10003577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 10003583 . C . PASS END=10003583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 10032132 . A . PASS END=10032246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:35:0,84,1260:0,98,255:40,0 chr1 10035650 . G . PASS END=10035650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10035651 . A . PASS END=10035653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:18,0 chr1 10035654 . G . PASS END=10035674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 10035675 . C . PASS END=10035747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,960:0,81,255:32,0 chr1 10035748 . C . PASS END=10035748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 10035749 . T . PASS END=10035756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 10035757 . A . PASS END=10035757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 10035758 . A . PASS END=10035759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 10035760 . A . PASS END=10035760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:26,0 chr1 10035761 . A . PASS END=10035790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr1 10035791 . A . PASS END=10035794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 10035795 . T . PASS END=10035795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,874:0,29,255:20,0 chr1 10035796 . C . PASS END=10035800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:21,0 chr1 10035801 . G . PASS END=10035802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr1 10035803 . A . PASS END=10035813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 10035814 . G . PASS END=10035821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:18,0 chr1 10035822 . G . PASS END=10035825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:21:0,36,540:0,63,255:13,0 chr1 10035826 . G . PASS END=10035830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 10035831 . A . PASS END=10035833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 10041089 . A . PASS END=10041096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:30,0 chr1 10041097 . A . PASS END=10041097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 10041098 . A . PASS END=10041104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 10041105 . T . PASS END=10041105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 10041106 . T . PASS END=10041174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1215:0,80,255:40,0 chr1 10041175 . G . LowGQ END=10041175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,9:49:0:49:0,0,1186:17,0,255:38,0 chr1 10041176 . G . PASS END=10041229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,100,1328:0,100,255:40,0 chr1 10042359 . C . PASS END=10042365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,914:0,72,255:25,0 chr1 10042366 . A . PASS END=10042367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:24,0 chr1 10042368 . A . PASS END=10042375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 10042376 . C . PASS END=10042391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 10042392 . A . PASS END=10042392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 10042393 . T . PASS END=10042479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,988:0,84,255:36,0 chr1 10042480 . T . PASS END=10042480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr1 10042481 . C . PASS END=10042542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:36,0 chr1 10042543 . C . PASS END=10042545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 10042546 . C . PASS END=10042547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 10042548 . T . PASS END=10042555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:28:0,78,1170:0,83,255:26,0 chr1 10042556 . G . PASS END=10042562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 10042563 . A . PASS END=10042573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 10042574 . A . PASS END=10042575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 10042576 . T . PASS END=10042576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr1 10042577 . G . PASS END=10042578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 10042579 . C . PASS END=10042580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr1 10042581 . T . PASS END=10042581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:27,0 chr1 10042582 . C . PASS END=10042594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr1 10042595 . A . PASS END=10042595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr1 10042596 . T . PASS END=10042599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10042600 . G . PASS END=10042605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 10042606 . C . PASS END=10042607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 10042608 . T . PASS END=10042623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,74,255:26,0 chr1 10042624 . C . PASS END=10042624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,947:0,53,255:24,0 chr1 10042625 . A . PASS END=10042641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,947:0,75,255:25,0 chr1 10042642 . A . PASS END=10042642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 10042643 . G . PASS END=10042647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,801:0,61,255:26,0 chr1 10042648 . T . PASS END=10042648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 10042649 . G . PASS END=10042677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,945:0,65,255:26,0 chr1 10042678 . G . PASS END=10042678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 10042679 . T . PASS END=10042704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 10042705 . T . PASS END=10042705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,749:0,36,255:20,0 chr1 10042706 . G . PASS END=10042706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 10042707 . C . PASS END=10042707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 10042708 . T . PASS END=10042712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 10042713 . T . PASS END=10042733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,666:0,41,255:18,0 chr1 10042734 . G . PASS END=10042734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 10042735 . A . PASS END=10042744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:17,0 chr1 10042745 . G . PASS END=10042753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,37,255:12,0 chr1 10042754 . A . PASS END=10042755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:16:0,27,405:0,48,255:9,0 chr1 10042756 . A . PASS END=10042759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 10045194 . G . PASS END=10045201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,130,255:40,0 chr1 10056769 . C . PASS END=10056782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1637:0,119,255:40,0 chr1 10057317 . A . PASS END=10057317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 10057318 . T . PASS END=10057318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:22,0 chr1 10057319 . G . PASS END=10057325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 10057326 . G . PASS END=10057326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 10057327 . A . PASS END=10057332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,953:0,69,255:26,0 chr1 10057333 . G . PASS END=10057335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 10057336 . G . PASS END=10057354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,947:0,67,255:26,0 chr1 10057355 . C . PASS END=10057360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 10057361 . C . PASS END=10057379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,914:0,62,255:26,0 chr1 10057380 . C . PASS END=10057380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 10057381 . T . PASS END=10057381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:19,0 chr1 10057382 . G . PASS END=10057389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 10067628 . G . PASS END=10067648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,937:0,75,255:26,0 chr1 10067649 . A . PASS END=10067656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:28,0 chr1 10067657 . A . PASS END=10067657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 10067658 . A . PASS END=10067660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10067661 . T . PASS END=10067661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 10067662 . G . PASS END=10067787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1215:0,87,255:40,0 chr1 10067788 . G . LowGQ END=10067788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,9:46:0:46:0,0,972:12,0,255:29,0 chr1 10067789 . G . PASS END=10067806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:37:0,98,1394:0,98,255:38,0 chr1 10068231 . A . PASS END=10068332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:37:0,101,1386:0,101,255:40,0 chr1 10075840 . G . PASS END=10075890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,103,1498:0,103,255:40,0 chr1 10093729 . A . PASS END=10093752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:53:0,120,1800:0,135,255:40,0 chr1 10132086 . A . PASS END=10132098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr1 10132099 . G . PASS END=10132105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 10132106 . A . PASS END=10132106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 10132107 . C . PASS END=10132142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:25,0 chr1 10132143 . C . PASS END=10132143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10132144 . C . PASS END=10132149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1031:0,71,255:25,0 chr1 10132150 . C . PASS END=10132151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 10132152 . T . PASS END=10132154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr1 10132155 . C . PASS END=10132166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 10132167 . A . PASS END=10132167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,911:0,53,255:26,0 chr1 10132168 . A . PASS END=10132169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 10132170 . C . PASS END=10132176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 10132177 . G . PASS END=10132228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,779:0,69,255:26,0 chr1 10132229 . T . PASS END=10132229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 10132230 . G . PASS END=10132239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 10132240 . T . PASS END=10132240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:21,0 chr1 10132241 . G . PASS END=10132243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 10132244 . C . PASS END=10132244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 10132245 . C . PASS END=10132248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 10132249 . C . PASS END=10132249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 10132250 . T . PASS END=10132263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 10132264 . G . PASS END=10132264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:19,0 chr1 10132265 . T . PASS END=10132272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,52,255:19,0 chr1 10132512 . G . PASS END=10132536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,6:82:99:74:0,118,1800:0,118,255:40,0 chr1 10132537 . G . PASS END=10132603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:70:0,120,1800:0,189,255:40,0 chr1 10155519 . G . PASS END=10155625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:34:0,89,1274:0,89,255:40,0 chr1 10155626 . G . PASS END=10155626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:29,0 chr1 10155627 . A . PASS END=10155627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 10155628 . T . PASS END=10155654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 10161166 . C . PASS END=10161244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,120,1800:0,122,255:40,0 chr1 10161245 . A . PASS END=10161253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 10161265 . A . PASS END=10161281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:38:0,90,1350:0,114,255:40,0 chr1 10161282 . G A, 48.97 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=2.290;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,17,0:0.447,0.000:38:8,8,0:13,9,0:48:84,0,50,538,722,1260:255,0,255:16,0:4.8966e+01,7.6882e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,6,11:13,8,7,10 chr1 10163006 . G . PASS END=10163011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:18,0 chr1 10163012 . T . PASS END=10163013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 10163014 . C . PASS END=10163014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 10163015 . T . PASS END=10163027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:26,0 chr1 10163028 . T . PASS END=10163134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:29:0,87,1072:0,87,255:40,0 chr1 10163135 . C . PASS END=10163135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1393:0,74,255:28,0 chr1 10163136 . A . PASS END=10163150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1125:0,82,255:31,0 chr1 10165574 . T . PASS END=10165774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:84:39:0,84,1307:0,84,255:40,0 chr1 10165775 . C . PASS END=10165775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1496:0,79,255:36,0 chr1 10165776 . T . PASS END=10165802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:37:0,90,1350:0,97,255:38,0 chr1 10166255 . C . PASS END=10166255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 10166256 . C . PASS END=10166256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 10166257 . T . PASS END=10166296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,635:0,40,255:19,0 chr1 10166297 . C . PASS END=10166316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:23,0 chr1 10166317 . C . PASS END=10166317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 10166318 . G . PASS END=10166424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:25,0 chr1 10166425 . C . PASS END=10166430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 10166431 . G . PASS END=10166431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 10166432 . G . PASS END=10166434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 10166435 . T . PASS END=10166437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 10166438 . C . PASS END=10166464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 10166465 . G . PASS END=10166465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 10166466 . T . PASS END=10166483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,900:0,62,255:24,0 chr1 10166484 . C . PASS END=10166484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 10166485 . T . PASS END=10166490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 10166491 . G . PASS END=10166493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 10166494 . C . PASS END=10166497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 10166498 . A . PASS END=10166521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,654:0,41,255:19,0 chr1 10166522 . C . PASS END=10166528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 10166529 . G . PASS END=10166550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,674:0,44,255:19,0 chr1 10166551 . G . PASS END=10166551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10166552 . A . PASS END=10166552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 10166553 . C . PASS END=10166570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr1 10166571 . G . PASS END=10166571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 10166572 . G . PASS END=10166572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 10166573 . T . PASS END=10166579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 10166580 . C . PASS END=10166582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 10166583 . C . PASS END=10166585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:19,0 chr1 10166586 . C . PASS END=10166613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,853:0,69,255:24,0 chr1 10166614 . G . PASS END=10166614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 10166615 . C . PASS END=10166620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 10166621 . C . PASS END=10166641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,562:0,40,255:18,0 chr1 10167280 . T . PASS END=10167432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:93:31:0,93,1164:0,93,255:40,0 chr1 10177517 . T . PASS END=10177635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,120,1800:0,121,255:40,0 chr1 10177636 . T . PASS END=10177658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,115,1690:0,115,255:40,0 chr1 10179571 . A . PASS END=10179655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1260:0,81,255:40,0 chr1 10179656 . C . PASS END=10179671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:25:0,60,900:0,68,255:26,0 chr1 10182020 . G . PASS END=10182045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:32,0 chr1 10182046 . T . PASS END=10182046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1093:0,25,255:32,0 chr1 10182047 . G . PASS END=10182049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 10182050 . G . PASS END=10182110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:37,0 chr1 10182111 . C . PASS END=10182132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr1 10182133 . A . PASS END=10182134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 10186852 . A . PASS END=10186861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,922:0,62,255:25,0 chr1 10186862 . C . PASS END=10186873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:28,0 chr1 10186874 . G . PASS END=10186874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 10186875 . C . PASS END=10186877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,995:0,87,255:29,0 chr1 10186878 . G . PASS END=10186878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,912:0,73,255:29,0 chr1 10186879 . G . PASS END=10186880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 10186881 . T . PASS END=10186881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:29,0 chr1 10186882 . C . PASS END=10186917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1133:0,84,255:33,0 chr1 10186918 . T . PASS END=10186922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 10186923 . A . PASS END=10186923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:24,0 chr1 10186924 . T . PASS END=10186932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,931:0,64,255:25,0 chr1 10186933 . A . PASS END=10186935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 10189450 . G . PASS END=10189506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,118,1800:0,118,255:40,0 chr1 10190558 . G . PASS END=10190674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:40:0,90,1444:0,90,255:40,0 chr1 10190773 . G . PASS END=10190846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:52:0,82,1800:0,82,255:40,0 chr1 10190847 . G . PASS END=10190871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,111,1665:0,121,255:40,0 chr1 10192427 . C . PASS END=10192540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:35:0,105,1139:0,105,255:40,0 chr1 10195046 . A . PASS END=10195046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 10195047 . C . PASS END=10195048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,889:0,78,255:26,0 chr1 10195049 . G . PASS END=10195244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:32:0,90,1130:0,96,255:40,0 chr1 10197125 . A . PASS END=10197138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,874:0,61,255:26,0 chr1 10197139 . C . PASS END=10197139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 10197140 . C . PASS END=10197140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 10197141 . A . PASS END=10197143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 10197144 . T . PASS END=10197145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 10197146 . C . PASS END=10197154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 10197155 . A . PASS END=10197155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 10197156 . A . PASS END=10197170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1166:0,87,255:33,0 chr1 10197171 . C . PASS END=10197171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1095:0,60,255:32,0 chr1 10197172 . T . PASS END=10197196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1031:0,83,255:33,0 chr1 10197197 . A . PASS END=10197199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 10197200 . T . PASS END=10197219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 10197220 . C . PASS END=10197246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,955:0,68,255:26,0 chr1 10197247 . A . PASS END=10197247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 10197248 . T . PASS END=10197257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 10197258 . C . PASS END=10197259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 10197260 . A . PASS END=10197261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 10197262 . A . PASS END=10197263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 10204998 . A . PASS END=10205097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:95:40:0,95,1476:0,95,255:40,0 chr1 10207021 . A . PASS END=10207021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 10207022 . A . PASS END=10207031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr1 10207032 . G . PASS END=10207119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1116:0,84,255:38,0 chr1 10207120 . C . PASS END=10207120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 10207121 . T . PASS END=10207132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:33,0 chr1 10207133 . A . PASS END=10207147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:23,0 chr1 10207148 . A . PASS END=10207148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 10209242 . T . PASS END=10209340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:64:0,120,1800:0,176,255:40,0 chr1 10211384 . A . PASS END=10211393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:30,0 chr1 10211394 . C . PASS END=10211394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 10211395 . A . PASS END=10211619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:30:0,83,1080:0,83,255:40,0 chr1 10218412 . A . PASS END=10218540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,111,1665:0,126,255:40,0 chr1 10221200 . C . PASS END=10221210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1241:0,89,255:35,0 chr1 10221211 . A . PASS END=10221217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1169:0,105,255:37,0 chr1 10221218 . T . PASS END=10221218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1294:0,64,255:34,0 chr1 10221219 . C . PASS END=10221219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 10221220 . G . PASS END=10221220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:34,0 chr1 10221221 . C . PASS END=10221340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1239:0,81,255:40,0 chr1 10221341 . C . PASS END=10221344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 10226302 . A . PASS END=10226304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 10226305 . C . PASS END=10226322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr1 10228194 . G . PASS END=10228196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 10228197 . C . PASS END=10228197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:20,0 chr1 10228198 . A . PASS END=10228198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 10228199 . G . PASS END=10228277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:25,0 chr1 10228278 . G . PASS END=10228311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 10228312 . A . PASS END=10228326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 10228327 . C . PASS END=10228328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 10230353 . C . PASS END=10230421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:66:0,120,1800:0,182,255:40,0 chr1 10231163 . C . PASS END=10231383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1215:0,89,255:40,1 chr1 10231384 . C . PASS END=10231387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr1 10238702 . A . PASS END=10238849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:84:33:0,84,1200:0,84,255:40,0 chr1 10238850 . A . PASS END=10238865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,66,255:26,0 chr1 10238866 . T . PASS END=10238876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,53,255:15,0 chr1 10239474 . A . PASS END=10239474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 10239475 . C . PASS END=10239493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,437:0,36,255:13,0 chr1 10239494 . A . PASS END=10239494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 10239495 . T . PASS END=10239526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,523:0,45,255:18,0 chr1 10239527 . A . PASS END=10239536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 10239537 . G . PASS END=10239539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 10239540 . C . PASS END=10239545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 10239546 . T . PASS END=10239546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:20,0 chr1 10239547 . C . PASS END=10239555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 10239556 . C . PASS END=10239585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 10239586 . C . PASS END=10239586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 10239587 . C . PASS END=10239600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 10239601 . A . PASS END=10239601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 10239602 . G . PASS END=10239612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 10239613 . G . PASS END=10239620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10239953 . T . PASS END=10240014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:42:0,94,1534:0,94,255:40,0 chr1 10270870 . C . LowDepth;LowGQ END=10270870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 10270919 . G . PASS END=10270919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr1 10270949 . G . PASS END=10270949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 10292304 . A . PASS END=10292304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 10292319 . G . PASS END=10292319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr1 10292382 . T . PASS END=10292382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 10292387 . A . PASS END=10292492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,102,1530:0,115,255:40,0 chr1 10316297 . T . PASS END=10316297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 10316305 . G . PASS END=10316381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,134,255:40,0 chr1 10318551 . C . PASS END=10318565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1102:0,84,255:30,0 chr1 10318566 . T . PASS END=10318566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:29,0 chr1 10318567 . T . PASS END=10318614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1119:0,81,255:40,0 chr1 10318615 . T . PASS END=10318651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,112,1800:0,112,255:40,0 chr1 10318652 . C G, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=4.610;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:15,15,0:9,10,0:48:85,0,50,894,858,1753:255,0,255:24,0:5.0000e+01,6.5492e-05,5.2961e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,11,14:15,9,13,12 chr1 10318653 . T . PASS END=10318689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,109,1431:0,109,255:40,0 chr1 10318690 . T . PASS END=10318716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,92,255:36,0 chr1 10318717 . G . PASS END=10318717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:25,0 chr1 10318718 . C . PASS END=10318719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 10318720 . T . PASS END=10318720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1009:0,30,255:25,0 chr1 10318721 . C . PASS END=10318725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1194:0,83,255:28,0 chr1 10318726 . C . PASS END=10318730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:29:0,77,1139:0,77,255:26,0 chr1 10321948 . A . PASS END=10321948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,172,255:40,0 chr1 10321953 . A . PASS END=10321953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr1 10321963 . T . PASS END=10322016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,155,255:40,0 chr1 10322017 . T . PASS END=10322028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,170,255:40,0 chr1 10327426 . A . PASS END=10327426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 10327438 . G . PASS END=10327444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 10327445 . A . PASS END=10327449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr1 10327450 . G . PASS END=10327456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:29,0 chr1 10327457 . A . PASS END=10327457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 10327458 . C . PASS END=10327595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:82:30:0,82,1088:0,82,255:40,0 chr1 10327596 . G . PASS END=10327596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:28,0 chr1 10327597 . G . PASS END=10327605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,88,255:29,0 chr1 10327606 . A . PASS END=10327612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,958:0,71,255:26,0 chr1 10327613 . C . PASS END=10327613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10327614 . C . PASS END=10327616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 10327623 . T . PASS END=10327623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 10328210 . G . PASS END=10328300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,127,255:40,0 chr1 10328301 . A . PASS END=10328321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1738:0,120,255:40,0 chr1 10331545 . A . PASS END=10331545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:33,0 chr1 10331560 . G . PASS END=10331637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:36:0,95,1327:0,95,255:40,0 chr1 10332299 . G . PASS END=10332364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,152,255:40,0 chr1 10333072 . G . PASS END=10333089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:69:0,120,1800:0,178,255:40,0 chr1 10335471 . C . PASS END=10335471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 10335473 . T . PASS END=10335473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 10335486 . A . PASS END=10335561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:42:0,93,1435:0,93,255:40,0 chr1 10336363 . T . PASS END=10336363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 10336379 . G . PASS END=10336457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,120,1800:0,124,255:40,0 chr1 10338038 . A . PASS END=10338038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1329:0,97,255:36,0 chr1 10338044 . A . PASS END=10338186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,99,1485:0,108,255:40,0 chr1 10339155 . T . PASS END=10339163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,230,255:40,0 chr1 10339164 . T . PASS END=10339196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:79:0,120,1800:0,220,255:40,0 chr1 10342380 . A . PASS END=10342389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr1 10342390 . T . PASS END=10342587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:30:0,84,1260:0,85,255:40,2 chr1 10342588 . A . PASS END=10342589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 10342590 . A . PASS END=10342591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 10342595 . A . PASS END=10342596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 10351140 . G . PASS END=10351219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,105,1574:0,105,255:40,0 chr1 10352105 . A . PASS END=10352180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:84:41:0,84,1435:0,84,255:40,0 chr1 10355144 . A . PASS END=10355223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:75:0,120,1800:0,193,255:40,0 chr1 10355715 . C . PASS END=10355715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 10355718 . G . PASS END=10355730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 10355731 . G . PASS END=10355739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr1 10355740 . C . PASS END=10355740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 10355741 . G . PASS END=10355752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:31,0 chr1 10355753 . T . PASS END=10355754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 10355755 . G . PASS END=10355756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 10355757 . G . PASS END=10355757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:26,0 chr1 10355758 . C . PASS END=10355758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 10355759 . T . PASS END=10355759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:26,0 chr1 10355760 . G . PASS END=10355771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 10355772 . C . PASS END=10355791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1027:0,87,255:29,0 chr1 10355792 . T . PASS END=10355792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:26,0 chr1 10355793 . C . PASS END=10355796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10355797 . C . PASS END=10355803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 10355804 . A . PASS END=10355804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10355805 . G . PASS END=10355821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,870:0,64,255:25,0 chr1 10355822 . A . PASS END=10355822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:20,0 chr1 10355823 . A . PASS END=10355824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 10356640 . T . PASS END=10356644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr1 10356645 . G . PASS END=10356645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 10356646 . T . PASS END=10356715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:36:0,93,1333:0,95,255:40,0 chr1 10356716 . G . PASS END=10356716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:30,0 chr1 10356717 . C . PASS END=10356723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:31,0 chr1 10356955 . G . PASS END=10356956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 10356957 . A . PASS END=10356957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 10356958 . A . PASS END=10356959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 10356960 . C . PASS END=10356960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 10356961 . G . PASS END=10356971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:25:0,75,953:0,75,255:25,0 chr1 10356972 . G . PASS END=10356972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 10356973 . G . PASS END=10356974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,992:0,65,255:27,0 chr1 10356975 . A . PASS END=10357135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:84:28:0,84,1063:0,84,255:40,0 chr1 10357206 . ATT AT,A,ATTT, 0.52 DRAGENIndelHardQUAL DP=45;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=0.524;FractionInformativeReads=0.956;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:23,9,4,7,0:0.209,0.093,0.163,0.000:43:12,6,3,3,0:11,3,1,4,0:9:0,4,54,48,161,98,44,80,158,94,35,99,176,128,129:255,0,255:22,30:5.1825e-01,9.4896e+00,6.2490e+01,5.3149e+01,1.7190e+02,1.0615e+02,4.9623e+01,9.0072e+01,1.6901e+02,1.0262e+02,7.0411e+01,1.3941e+02,2.1588e+02,1.6860e+02,1.6690e+02:0.00,5.00,8.00,5.00,10.00,8.00,5.00,10.00,10.00,8.00,34.77,39.77,39.77,39.77,37.77:11,12,10,10:14,9,10,10 chr1 10357232 . G . PASS END=10357252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,124,255:40,0 chr1 10357253 . A . PASS END=10357304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,144,255:40,0 chr1 10357310 . A . PASS END=10357310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,111,1665:0,144,255:37,0 chr1 10363221 . G . PASS END=10363224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10363225 . C . PASS END=10363234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 10363235 . T . PASS END=10363256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,958:0,81,255:36,0 chr1 10363257 . A . PASS END=10363257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1260:0,78,255:35,0 chr1 10363258 . G . PASS END=10363469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:96:37:0,96,1374:0,96,255:40,0 chr1 10363470 . A . PASS END=10363470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1474:0,74,255:40,0 chr1 10363471 . T . PASS END=10363544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1295:0,84,255:40,0 chr1 10363545 . A . PASS END=10363545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:31,0 chr1 10363546 . A . PASS END=10363611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1157:0,82,255:40,0 chr1 10363612 . G . PASS END=10363612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 10363613 . G . PASS END=10363648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:37:0,86,1125:0,86,255:38,0 chr1 10363649 . G . PASS END=10363649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1130:0,77,255:32,0 chr1 10363650 . A . PASS END=10363658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1208:0,97,255:35,0 chr1 10363659 . G . PASS END=10363659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1252:0,62,255:34,0 chr1 10363660 . T . PASS END=10363669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1266:0,91,255:36,0 chr1 10363670 . T . PASS END=10363670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1068:0,47,255:32,0 chr1 10363671 . G . PASS END=10363694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:38:0,97,1244:0,97,255:40,0 chr1 10363695 . G . PASS END=10363695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1425:0,72,255:38,0 chr1 10363696 . A . PASS END=10363806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,103,1507:0,103,255:40,2 chr1 10363807 . A . PASS END=10363807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1714:0,75,255:40,2 chr1 10363808 . A . PASS END=10363976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:35:0,80,1205:0,80,255:40,0 chr1 10363977 . C . PASS END=10363978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:33,0 chr1 10363979 . A . PASS END=10363990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,89,255:31,0 chr1 10363991 . T . PASS END=10363994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1058:0,79,255:27,0 chr1 10363995 . C . PASS END=10363996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:27,0 chr1 10363997 . T . PASS END=10364021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,1035:0,72,255:26,0 chr1 10364022 . A . PASS END=10364022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:22,0 chr1 10364023 . T . PASS END=10364027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 10364028 . T . PASS END=10364028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,695:0,41,255:22,0 chr1 10364029 . T . PASS END=10364033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 10364034 . A . PASS END=10364034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,758:0,58,255:20,0 chr1 10364035 . A . PASS END=10364036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 10364037 . T . PASS END=10364037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 10364038 . T . PASS END=10364051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,908:0,72,255:24,0 chr1 10364052 . A . PASS END=10364052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,860:0,39,255:22,0 chr1 10364053 . T . PASS END=10364057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 10364058 . A . PASS END=10364058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:22,0 chr1 10364059 . A . PASS END=10364089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,811:0,61,255:26,0 chr1 10364090 . G . PASS END=10364090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 10364091 . T . PASS END=10364091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 10364092 . T . PASS END=10364092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10364093 . C . PASS END=10364093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 10364094 . A . PASS END=10364095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10364096 . C . PASS END=10364097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 10364098 . C . PASS END=10364105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 10364106 . A . PASS END=10364106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:27,0 chr1 10364107 . A . PASS END=10364130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1155:0,80,255:31,0 chr1 10364131 . A . PASS END=10364131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:30,0 chr1 10364132 . G . PASS END=10364705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1197:0,86,255:40,0 chr1 10380101 . G . PASS END=10380194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,111,1363:0,111,255:40,0 chr1 10381767 . T . PASS END=10381769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,823:0,69,255:26,0 chr1 10381770 . C . PASS END=10381892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,986:0,81,255:40,0 chr1 10381893 . T . PASS END=10381900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:22,0 chr1 10381901 . G . PASS END=10381901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 10381902 . A . PASS END=10381906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:20,0 chr1 10381907 . A . PASS END=10381911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 10381912 . G . PASS END=10381912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 10381913 . A . PASS END=10381916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 10383942 . G . PASS END=10383947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:26,0 chr1 10383948 . T . PASS END=10383960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,974:0,81,255:29,0 chr1 10383961 . T . PASS END=10383961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 10383962 . G . PASS END=10384104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:29:0,80,1078:0,80,255:40,0 chr1 10384105 . C . PASS END=10384120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:24,0 chr1 10384816 . G . PASS END=10384821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1134:0,96,255:33,0 chr1 10384822 . G . PASS END=10384822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr1 10384823 . C . PASS END=10384941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1211:0,84,255:40,0 chr1 10384942 . A . PASS END=10384942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,908:0,76,255:28,0 chr1 10384943 . C . PASS END=10384944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 10384945 . T . PASS END=10384945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,995:0,63,255:28,0 chr1 10384946 . G . PASS END=10384946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 10384947 . T . PASS END=10384947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 10384948 . G . PASS END=10384949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 10384950 . G . PASS END=10384953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:24,0 chr1 10384956 . A . PASS END=10384956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:19,0 chr1 10386169 . C . PASS END=10386177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 10386178 . T . PASS END=10386178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 10386179 . T . PASS END=10386197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,988:0,84,255:30,0 chr1 10386198 . A . PASS END=10386198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 10386199 . G . PASS END=10386208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1194:0,90,255:32,0 chr1 10386209 . G . PASS END=10386209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 10386210 . A . PASS END=10386261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:32:0,93,1395:0,96,255:40,0 chr1 10386262 . G . PASS END=10386300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,111,1529:0,111,255:40,0 chr1 10386301 . T . PASS END=10386301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1434:0,75,255:38,0 chr1 10386302 . G . PASS END=10386302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:35:47:0,35,1277:0,35,255:38,0 chr1 10386303 . A . PASS END=10386303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr1 10386304 . G . LowGQ END=10386305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,11:47:0:46:0,0,866:123,0,255:31,0 chr1 10386306 . C . PASS END=10386347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:36:0,84,1260:0,91,255:40,0 chr1 10386348 . G . PASS END=10386348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 10386349 . A . PASS END=10386365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:22:0,63,945:0,66,255:21,0 chr1 10386366 . A . PASS END=10386366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 10386367 . C . PASS END=10386371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 10386372 . A . PASS END=10386389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:17:0,48,720:0,49,255:19,0 chr1 10386390 . G . PASS END=10386390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 10386391 . A . PASS END=10386397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 10386398 . T . PASS END=10386398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 10386399 . G . PASS END=10386400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 10386401 . T . PASS END=10386401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,533:0,34,255:15,0 chr1 10386402 . T . PASS END=10386412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 10386413 . G . PASS END=10386417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 10394578 . G . PASS END=10394581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr1 10394582 . T . PASS END=10394582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,865:0,45,255:24,0 chr1 10394583 . T . PASS END=10394591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:30,0 chr1 10394592 . T . PASS END=10394592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 10394593 . G . PASS END=10394596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 10394597 . A . PASS END=10394597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 10394598 . A . PASS END=10394686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1260:0,90,255:40,0 chr1 10394687 . G . PASS END=10394687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:27,0 chr1 10394688 . C . PASS END=10394691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:27,0 chr1 10394692 . C . PASS END=10394696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:25,0 chr1 10394700 . G . PASS END=10394700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 10396715 . C . PASS END=10396800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,111,1684:0,111,255:40,0 chr1 10396811 . G . PASS END=10396811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,108,1620:0,147,255:36,0 chr1 10397132 . A . PASS END=10397132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10397133 . G . PASS END=10397133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 10397134 . T . PASS END=10397137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 10397138 . T . PASS END=10397138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 10397139 . T . PASS END=10397151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr1 10397152 . A . PASS END=10397152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 10397153 . A . PASS END=10397155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 10397156 . A . PASS END=10397156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 10397157 . C . PASS END=10397158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr1 10397159 . C . PASS END=10397159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 10397160 . G . PASS END=10397261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:32:0,92,1189:0,92,255:40,0 chr1 10397264 . A . PASS END=10397264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 10397429 . A . PASS END=10397591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:32:0,87,1305:0,95,255:40,0 chr1 10399827 . C . PASS END=10399917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:35:0,88,1219:0,88,255:40,0 chr1 10399924 . G . PASS END=10399924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1303:0,95,255:33,0 chr1 10402108 . A . PASS END=10402226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:40:0,81,1215:0,104,255:40,0 chr1 10403290 . T . PASS END=10403319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1241:0,89,255:36,0 chr1 10403320 . T . PASS END=10403320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1284:0,78,255:32,0 chr1 10403321 . C . PASS END=10403331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:33,0 chr1 10403332 . A . PASS END=10403338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,85,255:26,0 chr1 10403339 . A . PASS END=10403339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:23,0 chr1 10403340 . A . PASS END=10403345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:26:0,63,945:0,76,255:23,0 chr1 10405903 . T . PASS END=10405995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,103,1400:0,103,255:40,0 chr1 10405996 . T . PASS END=10406007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:37:0,60,900:0,98,255:25,0 chr1 10406008 . G . PASS END=10406011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:26:0,54,810:0,62,255:18,0 chr1 10407819 . G . PASS END=10407885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,120,1800:0,126,255:40,0 chr1 10408707 . G . PASS END=10408787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,111,1800:0,111,255:40,0 chr1 10408788 . G . PASS END=10408791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:90:54:0,90,1755:0,90,255:40,0 chr1 10412689 . G . PASS END=10412794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,119,1800:0,119,255:40,0 chr1 10415428 . G . PASS END=10415454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,120,1800:0,132,255:40,0 chr1 10420981 . C . PASS END=10420981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 10420987 . G . PASS END=10421001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1025:0,84,255:35,0 chr1 10421002 . T . PASS END=10421002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:33,0 chr1 10421003 . G . PASS END=10421077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1124:0,83,255:40,0 chr1 10421078 . A . PASS END=10421078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr1 10421079 . T . PASS END=10421091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1224:0,83,255:32,0 chr1 10421092 . C . PASS END=10421094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 10421095 . C . PASS END=10421095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 10421096 . C . PASS END=10421101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,83,255:26,0 chr1 10421750 . C . PASS END=10421845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1000:0,81,255:40,0 chr1 10421846 . A . PASS END=10421883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,784:0,63,255:26,0 chr1 10423341 . G . PASS END=10423402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,145,255:40,0 chr1 10425158 . G . PASS END=10425163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1371:0,95,255:36,0 chr1 10425164 . A . PASS END=10425263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:37:0,93,1178:0,93,255:40,0 chr1 10425264 . G . PASS END=10425264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr1 10425265 . C . PASS END=10425298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,95,255:38,0 chr1 10425299 . A . PASS END=10425303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:32:0,72,1080:0,96,255:26,0 chr1 10425467 . G . PASS END=10425468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 10425469 . G . PASS END=10425469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 10425470 . G . PASS END=10425503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:26,0 chr1 10425504 . G . PASS END=10425504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 10425505 . A . PASS END=10425505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 10425506 . C . PASS END=10425507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10425508 . T . PASS END=10425508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 10425509 . G . PASS END=10425662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1177:0,80,255:40,0 chr1 10425663 . A . PASS END=10425688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 10425689 . A . PASS END=10425689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10425690 . A . PASS END=10425694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10425695 . C . PASS END=10425706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 10428525 . T . PASS END=10428527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10428528 . C . PASS END=10428528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 10428529 . T . PASS END=10428532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 10428533 . A . PASS END=10428533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 10428534 . C . PASS END=10428541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:28,0 chr1 10428542 . C . PASS END=10428542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 10428543 . C . PASS END=10428544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10428545 . C . PASS END=10428545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 10428546 . A . PASS END=10428567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 10428568 . A . PASS END=10428578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,945:0,62,255:23,0 chr1 10428579 . A . PASS END=10428579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 10428580 . G . PASS END=10428586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 10428587 . T . PASS END=10428588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 10428589 . A . PASS END=10428593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 10428594 . A . PASS END=10428596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 10428599 . G . PASS END=10428599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 10431199 . T . PASS END=10431312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1177:0,97,255:40,0 chr1 10431313 . G . PASS END=10431313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:26,0 chr1 10431314 . A . PASS END=10431315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 10431316 . C . PASS END=10431320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1078:0,77,255:26,0 chr1 10434374 . G . PASS END=10434391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1039:0,84,255:31,0 chr1 10434392 . C . PASS END=10434392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 10434393 . C . PASS END=10434490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:31:0,93,1149:0,93,255:40,0 chr1 10434491 . T . PASS END=10434491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:57:45:0,57,1413:0,57,255:38,0 chr1 10434492 . C . PASS END=10434523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:39:0,84,1309:0,84,255:40,0 chr1 10434912 . C . PASS END=10434914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 10434915 . A . PASS END=10434915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:34,0 chr1 10434916 . G . PASS END=10434916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 10434917 . T . PASS END=10434917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:36,0 chr1 10434918 . G . PASS END=10435067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:91:39:0,91,1273:0,91,255:40,1 chr1 10435068 . G . PASS END=10435084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:30:0,72,1080:0,90,255:26,0 chr1 10435085 . A . PASS END=10435086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 10435087 . C . PASS END=10435087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1043:0,62,255:29,0 chr1 10435088 . A . PASS END=10435090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 10435091 . A . PASS END=10435096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:26,0 chr1 10435097 . T . PASS END=10435099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:57:31:0,57,855:0,77,255:19,0 chr1 10435100 . T . PASS END=10435104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:20,0 chr1 10435313 . A . PASS END=10435314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 10435315 . A . PASS END=10435315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 10435316 . C . PASS END=10435320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:23,0 chr1 10435321 . C . PASS END=10435322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 10435323 . C . PASS END=10435323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 10435324 . C A, 48.72 PASS DP=28;MQ=249.15;MQRankSum=4.433;ReadPosRankSum=3.784;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:10,7,0:6,5,0:47:83,0,50,398,519,917:255,0,255:16,0:4.8724e+01,7.9988e-05,5.3000e+01,3.9809e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,6,6:7,9,11,1 chr1 10435325 . T . PASS END=10435325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,928:0,84,255:28,0 chr1 10435326 . T . PASS END=10435326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 10435327 . T . PASS END=10435328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 10435329 . C . PASS END=10435329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 10435330 . T . PASS END=10435330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 10435331 . G . PASS END=10435332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 10435333 . C . PASS END=10435335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 10435336 . C . PASS END=10435336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 10435337 . A . PASS END=10435342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 10435343 . C . PASS END=10435343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 10435344 . A . PASS END=10435361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1182:0,88,255:37,0 chr1 10435362 . A . PASS END=10435406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1300:0,100,255:39,0 chr1 10435407 . A . PASS END=10435407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:29,0 chr1 10435408 . C . PASS END=10435413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr1 10435414 . T . PASS END=10435414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr1 10435415 . C . PASS END=10435416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 10435417 . A . PASS END=10435417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr1 10435418 . G . PASS END=10435424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 10435425 . C . PASS END=10435431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1062:0,74,255:26,0 chr1 10436603 . G . PASS END=10436603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 10436604 . T . PASS END=10436608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 10436609 . G . PASS END=10436609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10436610 . C . PASS END=10436621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 10436622 . T . PASS END=10436624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 10436625 . C . PASS END=10436645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:25:0,71,1016:0,71,255:26,0 chr1 10437097 . T . PASS END=10437097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 10437308 . C . PASS END=10437308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 10437389 . C . PASS END=10437389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 10437484 . C . PASS END=10437484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:23,0 chr1 10437503 . C . PASS END=10437503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr1 10438186 . C . PASS END=10438186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 10438200 . T . PASS END=10438200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1233:0,96,255:32,0 chr1 10438211 . A . PASS END=10438211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 10438263 . C . PASS END=10438263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 10438397 . A . PASS END=10438460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,101,1487:0,101,255:40,0 chr1 10438622 . G . PASS END=10438622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 10438642 . T . PASS END=10438642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 10438644 . G . PASS END=10438644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 10438677 . T . PASS END=10438677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 10438759 . C . PASS END=10438759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 10438773 . C . PASS END=10438773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 10438913 . C . PASS END=10438913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 10439024 . T . PASS END=10439024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 10439029 . A . PASS END=10439029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 10439057 . A . PASS END=10439057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:18,0 chr1 10439080 . C . PASS END=10439080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 10439212 . G . PASS END=10439212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 10439332 . G . PASS END=10439332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 10439388 . G . PASS END=10439388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1225:0,96,255:32,0 chr1 10439431 . G . PASS END=10439431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 10439443 . C . PASS END=10439443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 10439466 . C . PASS END=10439466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 10439485 . G . PASS END=10439485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 10439503 . G . PASS END=10439503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10439620 . C . PASS END=10439620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 10439679 . C . PASS END=10439679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 10439791 . T . PASS END=10439791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 10439847 . C . PASS END=10439847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 10440000 . C . PASS END=10440000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 10440031 . C . PASS END=10440031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 10440077 . A . PASS END=10440077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,108,1620:0,135,255:36,0 chr1 10440126 . T . PASS END=10440126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 10440263 . C . PASS END=10440263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 10440284 . T . PASS END=10440284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1357:0,87,255:36,0 chr1 10440288 . T . PASS END=10440288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 10440342 . A . PASS END=10440342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 10440361 . C . PASS END=10440361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,89,255:28,0 chr1 10440824 . A . PASS END=10440824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 10440941 . T . PASS END=10440941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 10441258 . G . PASS END=10441258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 10441266 . C . PASS END=10441266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 10441286 . T . PASS END=10441286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 10441293 . T . PASS END=10441293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 10441309 . T . PASS END=10441309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 10441342 . A . PASS END=10441342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 10441387 . C . PASS END=10441387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr1 10441564 . G . PASS END=10441564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1484:0,120,255:40,0 chr1 10441585 . T . PASS END=10441585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 10441608 . G . PASS END=10441608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 10459175 . A . PASS END=10459182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 10459686 . A . PASS END=10459741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1041:0,86,255:35,0 chr1 10459742 . T . PASS END=10459754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1213:0,99,255:33,0 chr1 10459755 . C . PASS END=10459761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:31:0,68,1080:0,68,255:27,0 chr1 10460435 . C . PASS END=10460443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,682:0,54,255:18,0 chr1 10460444 . T . PASS END=10460445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 10460446 . C . PASS END=10460447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10460448 . A . PASS END=10460451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10460452 . C . PASS END=10460457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 10460458 . T . PASS END=10460460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10460461 . T . PASS END=10460484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,815:0,69,255:24,0 chr1 10460485 . T C, 50.00 PASS DP=23;MQ=184.82;MQRankSum=-0.157;ReadPosRankSum=0.472;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,14,0:0.609,0.000:23:3,6,0:6,8,0:47:85,0,48,443,322,765:255,0,255:7,0:5.0000e+01,7.8435e-05,5.0940e+01,4.4376e+02,3.5671e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,8,6:4,5,4,10 chr1 10460486 . G . PASS END=10460487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 10460488 . T . PASS END=10460488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 10460489 . T . PASS END=10460502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,860:0,61,255:26,0 chr1 10460503 . G . PASS END=10460503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 10460504 . G . PASS END=10460505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,931:0,67,255:26,0 chr1 10460506 . A . PASS END=10460506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 10460507 . A . PASS END=10460507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 10460508 . A . PASS END=10460508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10460509 . G . PASS END=10460509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 10460510 . G . PASS END=10460511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10460512 . A . PASS END=10460514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr1 10460515 . C . PASS END=10460516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 10460517 . A . PASS END=10460517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 10460518 . A . PASS END=10460518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 10460519 . G . PASS END=10460519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:27,0 chr1 10460520 . T . PASS END=10460522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 10460523 . T . PASS END=10460523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr1 10460524 . G . PASS END=10460526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 10460527 . T . PASS END=10460527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 10460528 . G . PASS END=10460530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10460531 . C . PASS END=10460532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 10460533 . G . PASS END=10460533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 10460534 . T . PASS END=10460534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:25,0 chr1 10460535 . C . PASS END=10460541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1061:0,71,255:25,0 chr1 10460542 . A . PASS END=10460542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:23,0 chr1 10460543 . G . PASS END=10460543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 10460544 . A . PASS END=10460544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,811:0,28,255:24,0 chr1 10460545 . G . PASS END=10460545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:24,0 chr1 10460546 . A . PASS END=10460546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,762:0,31,255:23,0 chr1 10460547 . T . PASS END=10460551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,909:0,64,255:26,0 chr1 10460552 . T . PASS END=10460552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 10460553 . C . PASS END=10460558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 10460559 . T . PASS END=10460559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 10460560 . G . PASS END=10460561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10460562 . A . PASS END=10460563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 10460564 . A . PASS END=10460564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:23,0 chr1 10460565 . A . PASS END=10460565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:24,0 chr1 10460566 . G . PASS END=10460578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,68,255:25,0 chr1 10460579 . A . PASS END=10460579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,820:0,20,255:21,0 chr1 10460580 . T . PASS END=10460581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 10460582 . C . PASS END=10460583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:20,0 chr1 10460584 . C . PASS END=10460585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,58,255:18,0 chr1 10460586 . T . PASS END=10460586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:17,0 chr1 10460587 . G . PASS END=10460595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,784:0,52,255:19,0 chr1 10460596 . T . PASS END=10460596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 10460597 . G . PASS END=10460604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 10460605 . T . PASS END=10460605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:14,0 chr1 10460606 . G . PASS END=10460606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 10460607 . T . PASS END=10460607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:13,0 chr1 10460608 . G . PASS END=10460609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 10460610 . A . PASS END=10460610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:13,0 chr1 10460611 . T . PASS END=10460615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,630:0,41,255:14,0 chr1 10460616 . T . PASS END=10460616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 10460617 . C . PASS END=10460617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 10460618 . A . PASS END=10460623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 10460624 . A . PASS END=10460624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,405:0,3,255:11,0 chr1 10460625 . A . PASS END=10460625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 10460626 . A . PASS END=10460627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:13:0,3,363:0,3,255:11,0 chr1 10460628 . T . PASS END=10460629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 10463128 . G . PASS END=10463193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:37:0,95,1341:0,95,255:40,0 chr1 10464218 . A . PASS END=10464218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 10464219 . G . PASS END=10464223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,824:0,72,255:26,0 chr1 10464224 . T . PASS END=10464230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr1 10464231 . A . PASS END=10464231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,867:0,70,255:28,0 chr1 10464232 . C . PASS END=10464236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1058:0,93,255:31,0 chr1 10464237 . A . PASS END=10464237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 10464238 . G . PASS END=10464293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1080:0,82,255:33,0 chr1 10464294 . G . PASS END=10464294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:28,0 chr1 10464295 . G . PASS END=10464312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1166:0,96,255:32,0 chr1 10464313 . G . PASS END=10464323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr1 10464324 . A . PASS END=10464327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 10464328 . A . PASS END=10464336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:24,0 chr1 10468128 . G . PASS END=10468197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,126,255:40,0 chr1 10471475 . G . PASS END=10471600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:33:0,85,1150:0,85,255:40,0 chr1 10471601 . A . PASS END=10471609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1047:0,74,255:26,0 chr1 10473119 . G . PASS END=10473130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:31,0 chr1 10473131 . T . PASS END=10473131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 10473132 . G . PASS END=10473155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:31:0,90,1350:0,93,255:38,0 chr1 10473156 . T . PASS END=10473156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr1 10473157 . C . PASS END=10473158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1441:0,104,255:38,0 chr1 10473159 . T . PASS END=10473195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1382:0,81,255:40,0 chr1 10473196 . C T, 45.78 PASS DP=41;MQ=230.46;MQRankSum=-1.563;ReadPosRankSum=3.194;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,16,0:0.390,0.000:41:10,7,0:15,9,0:45:81,0,50,572,894,1466:255,0,255:25,0:4.5779e+01,1.3642e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,9,6,10:9,16,9,7 chr1 10473197 . A . PASS END=10473233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1327:0,95,255:40,0 chr1 10473234 . G . PASS END=10473264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1305:0,95,255:39,0 chr1 10473265 . C . PASS END=10473265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 10473266 . G . PASS END=10473277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 10473278 . C . PASS END=10473308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 10477044 . G . PASS END=10477174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:34:0,94,1141:0,94,255:40,0 chr1 10477433 . G . PASS END=10477462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,676:0,43,255:19,0 chr1 10477463 . G . PASS END=10477475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 10477476 . T . PASS END=10477510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:19,0 chr1 10477511 . A . PASS END=10477511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 10477512 . C . PASS END=10477518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 10477519 . T . PASS END=10477519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:14,0 chr1 10477520 . T . PASS END=10477520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 10477521 . A . PASS END=10477534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 10477535 . C . PASS END=10477545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 10477546 . A . PASS END=10477546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 10477547 . G . PASS END=10477553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 10477554 . G . PASS END=10477554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 10477555 . C . PASS END=10477566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 10478883 . T . PASS END=10478982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:61:0,120,1800:0,128,255:40,0 chr1 10479474 . G . PASS END=10479499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,996:0,84,255:30,0 chr1 10479500 . T . PASS END=10479500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:30,0 chr1 10479501 . G . PASS END=10479543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1141:0,80,255:34,0 chr1 10479544 . T . PASS END=10479544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1076:0,66,255:30,0 chr1 10479545 . C . PASS END=10479573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1169:0,80,255:32,0 chr1 10479574 . T . PASS END=10479596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr1 10479687 . G . PASS END=10479715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,109,1800:0,109,255:40,0 chr1 10479716 . C . PASS END=10479788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:35:0,87,1219:0,88,255:40,0 chr1 10479789 . T . PASS END=10479792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,1157:0,60,255:28,0 chr1 10479793 . C . PASS END=10479794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 10479795 . T . PASS END=10479804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,74,255:24,0 chr1 10479805 . G . PASS END=10479806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:22,0 chr1 10490575 . A . PASS END=10490575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 10490576 . T . PASS END=10490578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 10490579 . A . PASS END=10490581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 10490582 . A . PASS END=10490583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10490584 . G . PASS END=10490591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 10490592 . G . PASS END=10490592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 10490593 . A . PASS END=10490593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 10490594 . C . PASS END=10490595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 10490596 . G . PASS END=10490596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr1 10490597 . A . PASS END=10490613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1100:0,84,255:29,0 chr1 10490614 . T . PASS END=10490616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 10490617 . T . PASS END=10490622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 10490623 . C . PASS END=10490625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 10491347 . A . PASS END=10491458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,99,1485:0,114,255:40,0 chr1 10493899 . A . PASS END=10493900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:23:0,33,796:0,33,255:24,1 chr1 10493901 . G . PASS END=10493913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,864:0,62,255:26,0 chr1 10493914 . G . PASS END=10494022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:33:0,87,1182:0,87,255:40,0 chr1 10494714 . A . PASS END=10494747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:87:0,120,1800:0,250,255:40,0 chr1 10500404 . A . PASS END=10500470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,99,1407:0,109,255:40,0 chr1 10502322 . C . PASS END=10502353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,109,1443:0,109,255:40,0 chr1 10502354 . T . PASS END=10502462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:44:0,111,1665:0,125,255:40,0 chr1 10510281 . A . PASS END=10510296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr1 10510297 . G . PASS END=10510311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:15,0 chr1 10510312 . T . PASS END=10510315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 10510316 . C . PASS END=10510354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:16,0 chr1 10510355 . T . PASS END=10510355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 10510356 . G . PASS END=10510360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10510361 . C . PASS END=10510379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 10511434 . C . PASS END=10511435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 10511436 . T . PASS END=10511436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 10511437 . A . PASS END=10511446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 10511447 . C . PASS END=10511448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 10511449 . G . PASS END=10511452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 10511453 . G . PASS END=10511454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 10511455 . A . PASS END=10511455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 10511456 . T . PASS END=10511456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 10511457 . A . PASS END=10511457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 10511458 . A . PASS END=10511459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 10511460 . G . PASS END=10511461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:23,0 chr1 10511462 . A . PASS END=10511476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 10511477 . C . PASS END=10511477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 10511478 . T . PASS END=10511502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,869:0,69,255:25,0 chr1 10511503 . A . PASS END=10511505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 10511506 . T . PASS END=10511506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 10511507 . C . PASS END=10511542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:19,0 chr1 10511543 . C . PASS END=10511543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 10511544 . C T, 49.61 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=1.945;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:6,4,0:6,6,0:48:84,0,50,355,425,780:255,0,255:11,0:4.9606e+01,6.9375e-05,5.3000e+01,3.5510e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,4,6:4,8,4,6 chr1 10511545 . C . PASS END=10511555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 10511556 . C . PASS END=10511564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 10511565 . G . PASS END=10511588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 10511589 . T C, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,9,0:0,14,0:66:154,69,0,889,69,889:255,69,0:0,0:1.1622e+02,6.6223e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,15:0,0,12,11 chr1 10511590 . G . PASS END=10511601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 10511602 . A . PASS END=10511602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 10511603 . G . PASS END=10511608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 10511609 . C . PASS END=10511626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 10511627 . G . PASS END=10511631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 10511632 . A . PASS END=10511644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr1 10511645 . G . PASS END=10511650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 10511651 . A . PASS END=10511652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 10521547 . C . PASS END=10521700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1172:0,83,255:40,0 chr1 10521701 . T . PASS END=10521701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:31,0 chr1 10521702 . T . PASS END=10521702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 10521703 . C . PASS END=10521703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr1 10521704 . T . PASS END=10521730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1216:0,83,255:33,0 chr1 10521731 . A . PASS END=10521759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:26,0 chr1 10523091 . T . PASS END=10523264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1172:0,83,255:40,0 chr1 10523265 . C . PASS END=10523266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:28:0,75,1125:0,84,255:25,0 chr1 10523488 . C . PASS END=10523644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1111:0,86,255:40,0 chr1 10523645 . A . PASS END=10523645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 10523646 . G . PASS END=10523646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 10523647 . C . PASS END=10523653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:22,0 chr1 10523654 . T . PASS END=10523654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 10523655 . G . PASS END=10523670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 10523671 . C . PASS END=10523676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,798:0,50,255:20,0 chr1 10523677 . T . PASS END=10523677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,603:0,32,255:18,0 chr1 10527247 . C . PASS END=10527389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:35:0,89,1249:0,89,255:40,0 chr1 10529234 . C . PASS END=10529362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:30:0,87,1305:0,90,255:40,0 chr1 10529363 . T . PASS END=10529363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 10529364 . C . PASS END=10529365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 10529366 . G . PASS END=10529366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 10529367 . G . PASS END=10529369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 10529370 . C . PASS END=10529380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 10529381 . C . PASS END=10529395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:19:0,48,720:0,57,255:18,0 chr1 10532380 . C . PASS END=10532393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,803:0,69,255:24,0 chr1 10532394 . T . PASS END=10532394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 10532395 . C . PASS END=10532396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 10532397 . T . PASS END=10532397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 10532398 . C . PASS END=10532408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,917:0,62,255:26,0 chr1 10532409 . G . PASS END=10532410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 10532411 . G . PASS END=10532419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1022:0,68,255:26,0 chr1 10532420 . G . PASS END=10532426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1210:0,93,255:33,0 chr1 10532427 . T . PASS END=10532427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 10532428 . C . PASS END=10532485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1016:0,80,255:34,0 chr1 10532486 . T . PASS END=10532486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 10532487 . G . PASS END=10532494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 10532495 . G . PASS END=10532495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 10532496 . G . PASS END=10532500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1124:0,87,255:29,0 chr1 10532501 . C . PASS END=10532501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 10532502 . C . PASS END=10532507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 10532508 . A . PASS END=10532515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 10535017 . C . PASS END=10535017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1473:0,114,255:38,0 chr1 10535024 . A . PASS END=10535060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1322:0,114,255:39,0 chr1 10535065 . G . PASS END=10535065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 10535067 . G . PASS END=10535067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 10545095 . A . PASS END=10545172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,103,1620:0,103,255:40,0 chr1 10555331 . C . PASS END=10555332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 10555333 . A . PASS END=10555333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:34,0 chr1 10555334 . A . PASS END=10555378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,105,1575:0,113,255:40,0 chr1 10584514 . A . PASS END=10584540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:103:0,120,1800:0,255,255:40,0 chr1 10596264 . C . PASS END=10596264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 10596270 . A . PASS END=10596303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1342:0,100,255:40,0 chr1 10596304 . G . PASS END=10596340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,100,1321:0,100,255:40,0 chr1 10596341 . C T, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.282;ReadPosRankSum=4.801;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,22,0:0.564,0.000:39:9,11,0:8,11,0:48:85,0,49,697,579,1276:255,0,255:17,0:5.0000e+01,7.2999e-05,5.1682e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,8,14:9,8,9,13 chr1 10596342 . C . PASS END=10596354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1393:0,104,255:40,0 chr1 10659282 . C . PASS END=10659282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 10659291 . C . PASS END=10659291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 10659295 . G . PASS END=10659295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 10659296 . G . PASS END=10659296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 10659297 . C . PASS END=10659392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,980:0,84,255:40,0 chr1 10659393 . C . PASS END=10659393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:21:42:0,21,1188:0,21,255:36,0 chr1 10659394 . A . PASS END=10659396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:41:0,90,1299:0,90,255:40,0 chr1 10659397 . C . PASS END=10659397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1117:0,37,255:35,0 chr1 10659398 . C . PASS END=10659398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1236:0,73,255:38,0 chr1 10659399 . C . PASS END=10659412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:40:0,90,1305:0,90,255:39,0 chr1 10659413 . T . PASS END=10659422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:33:0,63,945:0,86,255:26,0 chr1 10659423 . A . PASS END=10659423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:54:33:0,54,810:0,99,255:18,0 chr1 10678381 . G . PASS END=10678381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 10678389 . G . PASS END=10678410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,484:0,45,255:15,0 chr1 10678411 . A . PASS END=10678411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 10678412 . G . PASS END=10678414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 10678415 . T . PASS END=10678415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 10678416 . A . PASS END=10678417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 10678418 . G . PASS END=10678418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 10678419 . G . PASS END=10678430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:19,0 chr1 10678431 . T . PASS END=10678431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr1 10678432 . C . PASS END=10678432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10678433 . A . PASS END=10678440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 10678441 . A . PASS END=10678441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 10678442 . G . PASS END=10678443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 10678444 . C . PASS END=10678473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 10678474 . G . PASS END=10678474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 10683076 . A . PASS END=10683189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:35:0,87,1234:0,89,255:40,0 chr1 10684383 . C . PASS END=10684383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 10684397 . T . PASS END=10684399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 10684400 . C . PASS END=10684403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10684404 . G . PASS END=10684443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,566:0,45,255:19,0 chr1 10684444 . C . PASS END=10684455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 10684456 . A . PASS END=10684467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,759:0,47,255:19,0 chr1 10684468 . C . PASS END=10684468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 10684469 . T . PASS END=10684494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 10684498 . C . PASS END=10684498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 10687329 . G . PASS END=10687420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:44:0,106,1737:0,106,255:40,0 chr1 10689588 . G . PASS END=10689588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 10689589 . A . PASS END=10689595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 10689596 . T . PASS END=10689596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:16,0 chr1 10689597 . C . PASS END=10689612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:18,0 chr1 10689613 . G . PASS END=10689614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10689615 . C . PASS END=10689615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 10689616 . C . PASS END=10689622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 10689623 . T . PASS END=10689627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10689628 . T . PASS END=10689628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 10689629 . C . PASS END=10689631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10689632 . G . PASS END=10689648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr1 10689649 . T . PASS END=10689649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 10689650 . C . PASS END=10689665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,884:0,69,255:23,0 chr1 10689666 . C . PASS END=10689666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr1 10689667 . C . PASS END=10689715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:24,0 chr1 10689716 . A . PASS END=10689716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 10689717 . C . PASS END=10689761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,922:0,62,255:26,0 chr1 10689762 . G . PASS END=10689762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10689763 . G . PASS END=10689763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 10689764 . G . PASS END=10689886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:86:30:0,86,1202:0,86,255:40,0 chr1 10689887 . A . PASS END=10689923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:40:0,105,1502:0,105,255:40,0 chr1 10689924 . C T, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=1.368;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:10,11,0:7,12,0:48:85,0,48,777,608,1385:255,0,255:15,0:5.0000e+01,7.6364e-05,5.1202e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,10,13:10,7,14,9 chr1 10689925 . G . PASS END=10689961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:94:38:0,94,1365:0,94,255:40,0 chr1 10689962 . G . PASS END=10689998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:33,0 chr1 10689999 . G . PASS END=10690030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,947:0,72,255:25,0 chr1 10690031 . G . PASS END=10690044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,60,255:19,0 chr1 10690051 . G . PASS END=10690051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10690218 . C . PASS END=10690218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 10690300 . A . PASS END=10690300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 10690413 . A . PASS END=10690413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 10690444 . G . PASS END=10690444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 10690503 . T . PASS END=10690503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 10690559 . C . PASS END=10690559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 10690608 . C . PASS END=10690608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 10690614 . C . PASS END=10690614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 10690620 . A . PASS END=10690620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 10690660 . C . PASS END=10690660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 10690729 . A . PASS END=10690729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 10690797 . A . PASS END=10690797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 10698999 . C . LowDepth;LowGQ END=10699028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr1 10699029 . G . PASS END=10699065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 10699066 . G C, 2.03 DRAGENSnpHardQUAL DP=2;MQ=250.00;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,0,0:1,1,0:4:33,0,33,36,36,71:33,0,33:1,0:2.0289e+00,4.2827e+00,3.9911e+01,3.9809e+01,7.4691e+01,7.8447e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,0,1:0,1,1,0 chr1 10699067 . G . PASS END=10699107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 10699108 . G . PASS END=10699116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 10699117 . T . LowGQ END=10699117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 10699118 . C . PASS END=10699133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 10699134 . C . PASS END=10699139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr1 10699140 . CTCGTCG C, 50.00 PASS DP=7;MQ=250.00;MQRankSum=1.231;ReadPosRankSum=-1.231;FractionInformativeReads=0.714;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,2,0:0.400,0.000:5:2,2,0:1,0,0:47:79,0,47,179,179,179:24,0,140:3,2:4.9998e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1377e+02,1.8778e+02:0.00,29.00,32.01,34.77,63.77,37.78:2,1,2,0:1,2,2,0 chr1 10699141 . T . LowGQ END=10699147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,2:7:0:6:0,0,0:21,0,95:6,2 chr1 10699148 . C . PASS END=10699173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 10699174 . T . PASS END=10699184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 10699185 . G . PASS END=10699193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 10699194 . C . PASS END=10699197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 10699198 . T . PASS END=10699238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 10699239 . C . PASS END=10699262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,186:0,15,186:6,0 chr1 10699263 . C . LowGQ END=10699340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:0:0,0,0:0,0,0:3,0 chr1 10699341 . C . PASS END=10699352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 10699353 . C . PASS END=10699361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:9,0 chr1 10699362 . C . PASS END=10699362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 10699363 . A . PASS END=10699366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr1 10699367 . C . PASS END=10699367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 10699368 . G . PASS END=10699377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 10699378 . G . PASS END=10699378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr1 10699379 . A . PASS END=10699388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 10699389 . G . PASS END=10699389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 10699390 . A . LowGQ END=10699390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:1,0,255:9,0 chr1 10699391 . G . PASS END=10699392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,299:0,30,255:11,0 chr1 10699393 . A . PASS END=10699393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 10699394 . G . PASS END=10699394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 10699395 . C . PASS END=10699395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 10699396 . G . PASS END=10699419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr1 10699420 . A . LowGQ END=10699420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:11,0 chr1 10699421 . G . PASS END=10699426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,449:0,36,255:12,0 chr1 10699427 . C . PASS END=10699428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 10699429 . T . PASS END=10699430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10699431 . C . PASS END=10699431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 10699432 . A . PASS END=10699444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 10699445 . G . PASS END=10699473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr1 10699474 . T . PASS END=10699479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10699480 . C . PASS END=10699505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:18:0,50,729:0,50,255:19,0 chr1 10699506 . G . PASS END=10699509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10699510 . G . PASS END=10699510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 10699511 . A . PASS END=10699524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 10699525 . A . PASS END=10699579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,637:0,51,255:18,0 chr1 10699580 . T . PASS END=10699580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 10699581 . G . PASS END=10699599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 10699600 . G . PASS END=10699610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 10699611 . G . PASS END=10699611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 10699612 . T . PASS END=10699616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 10699617 . G . PASS END=10699617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:11,0 chr1 10699618 . C . PASS END=10699627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:11,0 chr1 10699628 . A . PASS END=10699642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 10699643 . C . PASS END=10699646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 10699647 . G . PASS END=10699647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 10699648 . C . PASS END=10699665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,390:0,33,255:12,0 chr1 10699666 . C . PASS END=10699666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 10699667 . C . PASS END=10699678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 10699679 . G . PASS END=10699682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 10699683 . C . PASS END=10699683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10699684 . G . PASS END=10699693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 10699694 . T . PASS END=10699717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 10699718 . G . PASS END=10699719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr1 10699720 . C . PASS END=10699721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 10699722 . G . LowGQ END=10699723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 10699724 . G . PASS END=10699736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 10699737 . G . PASS END=10699788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:15:0,41,535:0,41,255:18,0 chr1 10699789 . G . PASS END=10699789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 10699790 . C . PASS END=10699822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,629:0,43,255:19,0 chr1 10699823 . T . PASS END=10699823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 10699824 . G . PASS END=10699832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr1 10699833 . G . PASS END=10699836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10699837 . T . PASS END=10699850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 10699851 . C . PASS END=10699856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10699857 . C . PASS END=10699857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 10699858 . A . PASS END=10699864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 10699865 . T . PASS END=10699865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 10699866 . G . PASS END=10699866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 10699867 . C . PASS END=10699869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 10699870 . C . PASS END=10699878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 10699879 . T . PASS END=10699879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 10699880 . T . PASS END=10699902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:23,0 chr1 10699903 . C . PASS END=10699904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 10699905 . G . PASS END=10699910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 10699911 . G . PASS END=10699913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 10699914 . G . PASS END=10699921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10699922 . T . PASS END=10699922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10699923 . G . PASS END=10699926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 10699927 . G . PASS END=10699934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 10699935 . A . PASS END=10699950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 10699951 . C . PASS END=10699951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 10699952 . A . PASS END=10699962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 10699963 . A . PASS END=10699963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,642:0,33,255:20,0 chr1 10699964 . G . PASS END=10699968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 10699969 . A . PASS END=10699969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:20,0 chr1 10699970 . A . PASS END=10699970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 10699971 . G . PASS END=10699982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr1 10699983 . C . PASS END=10699987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10699988 . G . PASS END=10699995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 10699996 . C . PASS END=10700009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 10700010 . C . PASS END=10700016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10700017 . G . PASS END=10700025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 10700026 . G . PASS END=10700026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10700027 . T . PASS END=10700027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,983:0,71,255:26,0 chr1 10700028 . C . PASS END=10700106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1063:0,80,255:35,0 chr1 10700107 . A . PASS END=10700107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,79,255:26,0 chr1 10700108 . T . PASS END=10700108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:26,0 chr1 10700109 . G . PASS END=10700116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr1 10702080 . C . PASS END=10702115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 10702116 . C . PASS END=10702128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 10702129 . G . PASS END=10702159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 10702160 . C . PASS END=10702170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 10702171 . G . PASS END=10702176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr1 10702177 . G . PASS END=10702183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 10702184 . C . PASS END=10702194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 10702195 . A . PASS END=10702195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:7,0 chr1 10702196 . G . PASS END=10702197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 10702198 . G . PASS END=10702198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 10702199 . G . PASS END=10702202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 10702203 . T . PASS END=10702203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 10702204 . G . PASS END=10702204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 10702205 . A . PASS END=10702205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 10702206 . G . PASS END=10702206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 10702207 . C . LowGQ END=10702207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr1 10702208 . A . PASS END=10702209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 10702210 . A . PASS END=10702210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 10702211 . G . PASS END=10702211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 10702212 . A . PASS END=10702212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 10702213 . G . PASS END=10702213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 10702214 . T . PASS END=10702214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 10702215 . A . PASS END=10702215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:10,0 chr1 10702216 . T . PASS END=10702217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 10702218 . A . PASS END=10702218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,347:0,3,255:8,0 chr1 10702219 . G . PASS END=10702219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 10702220 . A . LowGQ END=10702222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,288:0,0,255:10,0 chr1 10702223 . C . PASS END=10702223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 10702224 . A . PASS END=10702225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:6:13:0,6,311:0,6,255:10,0 chr1 10702226 . G . PASS END=10702226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 10702227 . A . LowGQ END=10702227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,379:8,0,255:9,0 chr1 10702228 . C . PASS END=10702228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr1 10702229 . G . PASS END=10702229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:10,0 chr1 10702230 . G . PASS END=10702230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 10702231 . A . LowGQ END=10702233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,247:11,0,255:10,0 chr1 10702234 . G . PASS END=10702234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 10702235 . A . LowGQ END=10702236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:12:0,0,184:30,0,214:7,0 chr1 10702237 . G . PASS END=10702237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 10702238 . A . LowGQ END=10702238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:12:0,0,185:67,0,252:6,0 chr1 10702239 . G . PASS END=10702239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 10702240 . G . LowGQ END=10702242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,177:20,0,222:8,0 chr1 10702243 . G . PASS END=10702246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 10702247 . A . LowGQ END=10702247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,4:11:0:11:0,0,175:33,0,208:6,0 chr1 10702248 . G . PASS END=10702250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 10702251 . G . PASS END=10702251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 10702252 . G . PASS END=10702252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 10702253 . G . PASS END=10702254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 10702255 . G . LowGQ END=10702256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,4:11:0:11:0,0,159:0,0,192:9,0 chr1 10702257 . G . PASS END=10702257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:11,0 chr1 10702258 . G . PASS END=10702259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:12,0 chr1 10702260 . G . LowGQ END=10702260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:11,0 chr1 10702261 . C . PASS END=10702262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,368:0,36,255:13,0 chr1 10702263 . G . PASS END=10702265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 10702266 . G . PASS END=10702266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 10702267 . G . PASS END=10702267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 10702268 . A . PASS END=10702268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 10702269 . G . PASS END=10702282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 10702283 . A . PASS END=10702283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,380:0,12,255:11,0 chr1 10702284 . A . PASS END=10702284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 10702285 . G . PASS END=10702286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 10702287 . A . PASS END=10702287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 10702288 . T . PASS END=10702298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 10702299 . G . PASS END=10702300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr1 10702301 . G . PASS END=10702301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 10702302 . G . PASS END=10702303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 10702304 . T . PASS END=10702304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr1 10702305 . G . PASS END=10702311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10702312 . C . PASS END=10702312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,388:0,12,255:12,0 chr1 10702313 . G . PASS END=10702313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:13,0 chr1 10702314 . T . PASS END=10702315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 10702316 . C . PASS END=10702316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,438:0,17,255:14,0 chr1 10702317 . G . PASS END=10702319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 10702320 . C . PASS END=10702320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:13,0 chr1 10702321 . A . PASS END=10702322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 10702323 . C . PASS END=10702324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 10702325 . T . PASS END=10702325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,449:0,15,255:13,0 chr1 10702326 . C . PASS END=10702326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 10702327 . A . PASS END=10702327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 10702328 . T . PASS END=10702328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 10702329 . C . PASS END=10702329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 10702330 . A . PASS END=10702330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:14,0 chr1 10702331 . C . PASS END=10702331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 10702332 . C . PASS END=10702334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 10702335 . C . PASS END=10702336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 10702337 . G . PASS END=10702337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10702338 . C . PASS END=10702338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,474:0,9,255:13,0 chr1 10702339 . C . PASS END=10702339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10702340 . G . PASS END=10702340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 10702341 . C . PASS END=10702341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10702342 . A . PASS END=10702350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:14:0,31,460:0,31,255:13,0 chr1 10702351 . A . PASS END=10702351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:10,0 chr1 10702352 . A . PASS END=10702352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 10702353 . G . PASS END=10702353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 10702354 . A . LowGQ END=10702354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,380:13,0,255:9,0 chr1 10702355 . G . PASS END=10702355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,455:0,26,255:9,0 chr1 10702356 . G . PASS END=10702356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 10702357 . A . PASS END=10702362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,405:0,22,255:10,0 chr1 10702363 . A . PASS END=10702365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:9,0 chr1 10702366 . A . PASS END=10702366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 10702367 . G . PASS END=10702368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:8,0 chr1 10702369 . A . PASS END=10702370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 10702371 . C . PASS END=10702371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 10702372 . C . PASS END=10702372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 10702373 . G . PASS END=10702373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:8,0 chr1 10702374 . G . PASS END=10702377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 10702378 . G . PASS END=10702378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:6,0 chr1 10702379 . C . PASS END=10702379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 10702916 . C . PASS END=10702925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 10702926 . G . PASS END=10702926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 10702927 . C . PASS END=10702928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 10702929 . C . PASS END=10702932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 10702933 . T . LowGQ END=10702933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,418:5,0,255:12,0 chr1 10702934 . T . PASS END=10702938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 10702939 . A . PASS END=10702947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10702948 . C . PASS END=10702949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 10702950 . G . PASS END=10702955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 10702956 . G . PASS END=10702962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 10702963 . T . PASS END=10702963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 10702964 . C . PASS END=10702968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 10702969 . G . PASS END=10702982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 10702983 . G . PASS END=10702983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 10702984 . G . PASS END=10702995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 10702996 . G . PASS END=10702998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 10702999 . C . PASS END=10702999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 10703000 . T . PASS END=10703002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 10703003 . A . PASS END=10703003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 10703004 . G . PASS END=10703031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 10703032 . T . PASS END=10703032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 10703033 . C . PASS END=10703038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 10703039 . C . PASS END=10703039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 10703040 . C . PASS END=10703048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 10703049 . T . PASS END=10703049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 10703050 . G . PASS END=10703055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 10703056 . C . PASS END=10703057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 10703217 . C . PASS END=10703217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,705:0,57,255:19,0 chr1 10703218 . T . PASS END=10703218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,510:0,7,255:16,0 chr1 10703219 . G . PASS END=10703219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,551:0,10,255:17,0 chr1 10703220 . G . LowGQ END=10703220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,520:21,0,255:16,0 chr1 10703221 . G . PASS END=10703221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 10703222 . A . PASS END=10703224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,558:0,24,255:18,0 chr1 10703225 . G . LowGQ END=10703225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,518:15,0,255:16,0 chr1 10703226 . G . PASS END=10703226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:18,0 chr1 10703227 . G . PASS END=10703227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr1 10703228 . G . PASS END=10703241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,613:0,40,255:19,0 chr1 10703242 . T . PASS END=10703243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 10703244 . C . PASS END=10703250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 10703251 . A . PASS END=10703257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:23,0 chr1 10703258 . T . PASS END=10703258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 10703259 . C . PASS END=10703264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 10703265 . G . PASS END=10703265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 10703266 . T . PASS END=10703267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr1 10703268 . C . PASS END=10703286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1009:0,84,255:32,0 chr1 10703287 . A . PASS END=10703287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:28,0 chr1 10703288 . T . PASS END=10703288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:28,0 chr1 10703289 . C . PASS END=10703300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 10703301 . G . PASS END=10703301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 10703302 . A . PASS END=10703322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1094:0,90,255:30,0 chr1 10703323 . T . PASS END=10703323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 10703324 . C . PASS END=10703329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 10703330 . T . PASS END=10703340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:24,0 chr1 10703341 . T . PASS END=10703341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 10703342 . G . PASS END=10703347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 10703348 . T . PASS END=10703348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 10703349 . C . PASS END=10703351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 10703352 . C . PASS END=10703358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,804:0,53,255:19,0 chr1 10703359 . T . PASS END=10703359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:16,0 chr1 10703360 . A . PASS END=10703368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,50,255:19,0 chr1 10704974 . C . PASS END=10704974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 10704975 . T . PASS END=10704975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 10704976 . A . PASS END=10704980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 10704981 . G . PASS END=10704981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:29,0 chr1 10704982 . C . PASS END=10704985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:31,0 chr1 10704986 . A . PASS END=10704986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:30,0 chr1 10704987 . C . PASS END=10704995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1158:0,89,255:35,0 chr1 10704996 . C . PASS END=10704996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:34,0 chr1 10704997 . T . PASS END=10705127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,82,255:40,0 chr1 10705128 . C . PASS END=10705141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr1 10705142 . A . PASS END=10705145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,855:0,75,255:19,0 chr1 10706185 . C . PASS END=10706361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1215:0,84,255:40,0 chr1 10706362 . G . PASS END=10706362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 10706363 . T . PASS END=10706370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 10706371 . G . PASS END=10706383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 10707854 . T . PASS END=10707857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 10707858 . T . PASS END=10707870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 10707871 . G . PASS END=10707874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 10707875 . G . PASS END=10707876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10707877 . A . PASS END=10707880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 10707881 . G . PASS END=10707885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 10707886 . T . PASS END=10707894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 10707895 . G . PASS END=10707895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 10707896 . C . PASS END=10707896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 10707897 . T . PASS END=10707897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:16,0 chr1 10707898 . T . PASS END=10707898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 10707899 . G . PASS END=10707899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 10707900 . G . PASS END=10707912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:16,0 chr1 10707913 . A . PASS END=10707913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 10707914 . A . PASS END=10707915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10707916 . T . PASS END=10707916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 10707917 . C . PASS END=10707930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 10707931 . A . PASS END=10707931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 10707932 . G . PASS END=10707936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 10707937 . G . PASS END=10707937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 10707938 . C . PASS END=10707946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 10707947 . C . PASS END=10707947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 10707948 . A . PASS END=10707948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 10707949 . C . PASS END=10707954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10707955 . C . PASS END=10707956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 10707957 . G . PASS END=10707960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 10707961 . T . PASS END=10707961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 10707962 . C . PASS END=10707962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 10707963 . T . PASS END=10707963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 10707964 . G . PASS END=10707967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 10707968 . C . LowGQ END=10707968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,299:6,0,255:10,0 chr1 10707969 . A . PASS END=10707969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,387:0,25,255:11,0 chr1 10707970 . T . PASS END=10707970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 10707971 . C . LowGQ END=10707971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,294:44,0,255:9,0 chr1 10707972 . T . PASS END=10707972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 10707973 . G . PASS END=10707974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 10707975 . G . PASS END=10707975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 10707976 . G . LowGQ END=10707976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,277:24,0,255:10,0 chr1 10707977 . T . PASS END=10707977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 10707978 . A . PASS END=10707978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:12,0 chr1 10707979 . T . PASS END=10707983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:15,0 chr1 10707984 . G . PASS END=10707984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:13,0 chr1 10707985 . A . PASS END=10707986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 10707987 . G . PASS END=10707987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:14,0 chr1 10707988 . C . PASS END=10707989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:15,0 chr1 10707990 . A . PASS END=10707990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:13,0 chr1 10707991 . G . PASS END=10707992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,415:0,28,255:14,0 chr1 10707993 . T . PASS END=10707994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 10707995 . C . LowGQ END=10707995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,349:2,0,255:13,0 chr1 10707996 . T . PASS END=10707996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 10707997 . T . LowGQ END=10707997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,343:2,0,255:12,0 chr1 10707998 . C . PASS END=10707999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 10708000 . A . LowGQ END=10708000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,368:0,0,255:13,0 chr1 10708001 . G . PASS END=10708007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 10708008 . A . PASS END=10708008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,399:0,28,255:13,0 chr1 10708009 . G . PASS END=10708009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 10708010 . G . PASS END=10708010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 10708011 . G . PASS END=10708015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10708016 . G . PASS END=10708017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 10708018 . T . PASS END=10708018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:12,0 chr1 10708019 . G . PASS END=10708019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 10708020 . G . LowGQ END=10708020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,372:16,0,255:12,0 chr1 10708021 . A . PASS END=10708022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 10708023 . G . PASS END=10708023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:14,0 chr1 10708024 . G . PASS END=10708026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 10708027 . C . PASS END=10708027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 10708028 . G . PASS END=10708049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:17,0 chr1 10708050 . C . PASS END=10708050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 10708051 . C . PASS END=10708054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:14,0 chr1 10708055 . C . PASS END=10708055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:14,0 chr1 10708056 . A . PASS END=10708064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 10708065 . A . PASS END=10708065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 10708066 . C . PASS END=10708067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 10708068 . G . PASS END=10708068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 10708069 . T . PASS END=10708073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 10708074 . G . PASS END=10708074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 10708075 . T . PASS END=10708077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 10708078 . T . PASS END=10708078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 10708079 . G . PASS END=10708079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 10708080 . A . PASS END=10708080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:16,0 chr1 10708081 . C . PASS END=10708090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,584:0,41,255:19,0 chr1 10708091 . C . PASS END=10708095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 10708096 . G . PASS END=10708096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 10708097 . G . PASS END=10708099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 10708100 . C . PASS END=10708100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 10708101 . G . PASS END=10708101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 10708102 . A . PASS END=10708102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 10708103 . G . PASS END=10708104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 10708105 . G . PASS END=10708106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 10708107 . G . PASS END=10708107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 10708108 . C . PASS END=10708110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,707:0,49,255:19,0 chr1 10708111 . T . PASS END=10708117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 10708118 . T . PASS END=10708118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:20,0 chr1 10708119 . T . PASS END=10708119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 10708120 . T . PASS END=10708120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 10708121 . G . PASS END=10708122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 10708123 . T . PASS END=10708123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:19,0 chr1 10708124 . C . PASS END=10708134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr1 10708135 . A . PASS END=10708135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 10708136 . G . PASS END=10708138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 10708139 . C . PASS END=10708139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 10708140 . G . PASS END=10708141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 10708142 . A G, 31.94 PASS DP=22;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=0.334;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,9,0:0.409,0.000:22:4,5,0:9,4,0:32:67,0,50,317,465,782:255,0,255:12,0:3.1944e+01,2.7981e-03,5.3003e+01,3.1679e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,0,9:5,8,4,5 chr1 10708143 . A . PASS END=10708144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 10708145 . G . PASS END=10708146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 10708147 . C . PASS END=10708170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,607:0,43,255:19,0 chr1 10708171 . C . PASS END=10708174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 10708175 . T . PASS END=10708175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 10708176 . C . PASS END=10708176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:19,0 chr1 10708177 . C . PASS END=10708177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 10708178 . C . PASS END=10708178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 10708179 . T . PASS END=10708179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 10708180 . C . PASS END=10708196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,615:0,43,255:19,0 chr1 10709127 . T . PASS END=10709128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 10709129 . T . PASS END=10709129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 10709130 . G . PASS END=10709136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:25,0 chr1 10709137 . T . PASS END=10709137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 10709138 . G . PASS END=10709142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,976:0,78,255:26,0 chr1 10709143 . C . PASS END=10709143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 10709144 . C . PASS END=10709146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 10709147 . G . PASS END=10709234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:30:0,88,1141:0,88,255:40,0 chr1 10709235 . T . PASS END=10709235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:30,0 chr1 10709236 . C . PASS END=10709249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,88,255:30,0 chr1 10709340 . C . PASS END=10709346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,65,255:24,0 chr1 10709347 . G . PASS END=10709348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:29:0,75,1125:0,77,255:27,0 chr1 10709349 . T . PASS END=10709356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 10709357 . C . PASS END=10709358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 10709359 . A . PASS END=10709403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1033:0,87,255:34,0 chr1 10709404 . C . PASS END=10709438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1186:0,83,255:33,0 chr1 10709439 . T . PASS END=10709439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr1 10709440 . C . PASS END=10709440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 10709441 . C T, 47.54 PASS DP=32;MQ=250.00;MQRankSum=4.719;ReadPosRankSum=4.029;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,13,0:0.406,0.000:32:11,8,0:8,5,0:46:82,0,50,465,680,1144:255,0,255:17,0:4.7542e+01,9.8109e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,8,5:9,10,9,4 chr1 10709442 . G . PASS END=10709450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 10709451 . T . PASS END=10709452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1041:0,74,255:29,0 chr1 10709453 . G . PASS END=10709455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 10709456 . G . PASS END=10709478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 10709479 . G . PASS END=10709483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:22:0,62,945:0,62,255:21,0 chr1 10709484 . C . PASS END=10709494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:17,0 chr1 10710749 . C . PASS END=10710806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1410:0,93,255:40,0 chr1 10710807 . T . PASS END=10710812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1441:0,101,255:36,0 chr1 10710998 . C . PASS END=10711013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 10711014 . T . PASS END=10711016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 10711017 . G . PASS END=10711036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,443:0,39,255:13,0 chr1 10711037 . G . PASS END=10711037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 10711038 . A . PASS END=10711042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 10711043 . T . PASS END=10711043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 10711044 . C . PASS END=10711063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 10711064 . G . PASS END=10711066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 10711067 . C . PASS END=10711083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 10711084 . C . PASS END=10711084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 10711085 . T . PASS END=10711088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 10711089 . C . PASS END=10711089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 10711090 . T . PASS END=10711093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 10711094 . G . PASS END=10711094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 10711095 . C . PASS END=10711096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:8,0 chr1 10711097 . G . PASS END=10711104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 10711105 . C . PASS END=10711113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,360:0,33,255:11,0 chr1 10711114 . G . PASS END=10711120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 10711121 . T . PASS END=10711121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 10711122 . G . PASS END=10711125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 10711126 . C . PASS END=10711131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 10711132 . T . PASS END=10711132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 10711133 . C . PASS END=10711133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 10713434 . C . PASS END=10713434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 10713435 . T . PASS END=10713435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:10,0 chr1 10713436 . G . PASS END=10713442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr1 10713443 . A . PASS END=10713461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:17,0 chr1 10713462 . G . PASS END=10713462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 10713463 . G . PASS END=10713495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,670:0,54,255:19,0 chr1 10713496 . A . PASS END=10713503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10713504 . C . PASS END=10713545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,659:0,48,255:19,0 chr1 10713546 . C . PASS END=10713546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 10713547 . G . PASS END=10713598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,535:0,41,255:17,0 chr1 10713599 . G . LowGQ END=10713599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,604:9,0,255:14,0 chr1 10713600 . C . PASS END=10713610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,668:0,43,255:19,0 chr1 10713611 . C . PASS END=10713612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10713613 . G . PASS END=10713617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 10713618 . G . PASS END=10713666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:23,0 chr1 10713667 . C . PASS END=10713667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 10713668 . C . PASS END=10713669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 10713670 . A . PASS END=10713678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,775:0,50,255:20,0 chr1 10713679 . G . PASS END=10713683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 10713684 . G . PASS END=10713727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:17:0,44,675:0,44,255:19,0 chr1 10713728 . G . PASS END=10713764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 10713765 . T C, 101.18 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,9,0:0,9,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,4:0,0,11,7 chr1 10713766 . G . PASS END=10713791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,692:0,54,255:19,0 chr1 10713792 . C . PASS END=10713798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 10713799 . A . PASS END=10713799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:19,0 chr1 10713800 . T . PASS END=10713802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10713803 . T . PASS END=10713804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 10713805 . C . PASS END=10713805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 10713806 . T . PASS END=10713808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,807:0,63,255:22,0 chr1 10713809 . T . PASS END=10713809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 10713810 . G . PASS END=10713816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:23,0 chr1 10713817 . T . PASS END=10713817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 10713818 . T . PASS END=10713829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr1 10713830 . G . PASS END=10713831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10713832 . C . PASS END=10713856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 10713857 . C . PASS END=10713858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 10713859 . G . PASS END=10713859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:28,0 chr1 10713860 . C . PASS END=10713920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1055:0,80,255:34,0 chr1 10713921 . C . PASS END=10713922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 10713923 . G . PASS END=10713931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,94,255:27,0 chr1 10713932 . A . PASS END=10713936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 10713937 . A . PASS END=10713937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:24,0 chr1 10713938 . C . PASS END=10713959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 10713960 . C . PASS END=10713974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:24,0 chr1 10713975 . C . PASS END=10713975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 10713976 . T . PASS END=10713996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:25,0 chr1 10713997 . G A, 47.13 PASS DP=26;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=1.924;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,10,0:0.385,0.000:26:10,5,0:6,5,0:46:82,0,50,353,543,897:255,0,255:15,0:4.7131e+01,1.0587e-04,5.3000e+01,3.5340e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,11,7,3:7,9,6,4 chr1 10713998 . G . PASS END=10714017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:25,0 chr1 10714018 . G . PASS END=10714018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 10714019 . A . PASS END=10714020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 10714021 . C . PASS END=10714023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10714024 . A . PASS END=10714026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:27,0 chr1 10714027 . T . PASS END=10714030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 10714031 . G . PASS END=10714031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 10714032 . G . PASS END=10714034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 10714035 . C . PASS END=10714060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,889:0,61,255:27,0 chr1 10714061 . T . PASS END=10714061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,860:0,36,255:24,0 chr1 10714062 . C . PASS END=10714064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr1 10714065 . G . PASS END=10714066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 10714067 . T . PASS END=10714073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 10714074 . G . PASS END=10714096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:28,0 chr1 10714097 . C . PASS END=10714097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:27,0 chr1 10714098 . G . PASS END=10714098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 10714099 . C . PASS END=10714099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 10714100 . G . PASS END=10714105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr1 10714106 . A . PASS END=10714106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:26,0 chr1 10714107 . G . PASS END=10714197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:30:0,82,1210:0,82,255:38,0 chr1 10714198 . G . PASS END=10714198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:36,0 chr1 10714199 . C . PASS END=10714256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:37:0,89,1246:0,89,255:40,0 chr1 10714257 . G . PASS END=10714274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,92,255:32,0 chr1 10714275 . C . PASS END=10714275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 10714476 . C . PASS END=10714478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 10714479 . C . PASS END=10714479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 10714480 . A . PASS END=10714486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1016:0,71,255:26,0 chr1 10714487 . G . PASS END=10714492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1147:0,80,255:29,0 chr1 10714493 . G . PASS END=10714493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 10714494 . G . PASS END=10714597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:30:0,83,1178:0,83,255:40,1 chr1 10714598 . C . PASS END=10714598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,0 chr1 10714599 . T . PASS END=10714602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1441:0,101,255:37,0 chr1 10714603 . G . PASS END=10714603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:34,0 chr1 10714604 . G . PASS END=10714627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,102,255:35,0 chr1 10714628 . G . PASS END=10714648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr1 10715706 . C . PASS END=10715707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 10715708 . G . PASS END=10715708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 10715709 . C . PASS END=10715709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 10715710 . A . PASS END=10715714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:22,0 chr1 10715715 . G . PASS END=10715717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:23,0 chr1 10715718 . A . LowGQ END=10715718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,745:11,0,255:21,0 chr1 10715719 . T . PASS END=10715723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,801:0,36,255:24,0 chr1 10715724 . G . PASS END=10715753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,931:0,64,255:26,0 chr1 10715754 . G . PASS END=10715754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10715755 . T . PASS END=10715755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 10715756 . A . PASS END=10715757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10715758 . T . PASS END=10715764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr1 10715765 . T . PASS END=10715769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10715770 . T . PASS END=10715773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 10715774 . C . PASS END=10715776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10715777 . G . PASS END=10715780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 10715781 . G . PASS END=10715819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:31,0 chr1 10715820 . C . PASS END=10715847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,792:0,66,255:26,0 chr1 10715848 . A . PASS END=10715870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,704:0,44,255:19,0 chr1 10716703 . C . PASS END=10716707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1194:0,96,255:32,0 chr1 10716708 . A . PASS END=10716708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 10716709 . G . PASS END=10716732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1090:0,83,255:36,0 chr1 10716733 . G . PASS END=10716733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1296:0,59,255:34,0 chr1 10716734 . T . PASS END=10716758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1339:0,95,255:40,0 chr1 10716759 . A . PASS END=10716759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1344:0,76,255:35,0 chr1 10716760 . G . PASS END=10716783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,96,255:36,0 chr1 10716784 . G . PASS END=10716786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 10716787 . C . PASS END=10716793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 10718565 . C . PASS END=10718568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 10718569 . C . PASS END=10718569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 10718570 . A . PASS END=10718571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 10718572 . T . PASS END=10718573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1041:0,62,255:29,0 chr1 10718574 . T . PASS END=10718575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 10718576 . T . PASS END=10718576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 10718577 . T . PASS END=10718581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1097:0,80,255:32,0 chr1 10718582 . G . PASS END=10718582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:31,0 chr1 10718583 . T . PASS END=10718590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1065:0,82,255:32,0 chr1 10718591 . T . PASS END=10718591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:30,0 chr1 10718592 . A . PASS END=10718594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 10718595 . T . PASS END=10718595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:32,0 chr1 10718596 . C . PASS END=10718633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1209:0,86,255:35,0 chr1 10719759 . T . PASS END=10719764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 10719765 . G . PASS END=10719774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 10719775 . T . PASS END=10719775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:26,0 chr1 10719776 . C . PASS END=10719778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 10719779 . C . PASS END=10719779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 10719780 . G . PASS END=10719780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 10719781 . T . PASS END=10719783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,910:0,81,255:27,0 chr1 10719784 . T . PASS END=10719784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 10719785 . G . PASS END=10719786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 10719787 . T . PASS END=10719787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 10719788 . G . PASS END=10719792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 10719793 . C . PASS END=10719793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 10719794 . T . PASS END=10719801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:31,0 chr1 10719802 . A . PASS END=10719802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:29,0 chr1 10719803 . G . PASS END=10719804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 10719805 . A . PASS END=10719805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 10719806 . G . PASS END=10719806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 10719807 . G . PASS END=10719807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 10719808 . T . PASS END=10719815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 10719816 . A . PASS END=10719816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 10719817 . G . PASS END=10719872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1260:0,87,255:36,0 chr1 10719873 . G . PASS END=10719873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:33,0 chr1 10719874 . C . PASS END=10719913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1294:0,92,255:35,0 chr1 10719914 . C . PASS END=10719915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 10719916 . G . PASS END=10719917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 10719918 . C . PASS END=10719918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:28,0 chr1 10719919 . T . PASS END=10719929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:29,0 chr1 10719930 . G . PASS END=10719932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 10719933 . A . PASS END=10719933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 10719934 . C . PASS END=10719934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 10719935 . C . PASS END=10719936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 10719937 . T . PASS END=10719937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 10719938 . G . PASS END=10719941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 10719942 . G . PASS END=10719942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 10719943 . G . PASS END=10719943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 10719944 . G . PASS END=10719972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1078:0,86,255:33,0 chr1 10719973 . A . PASS END=10719973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 10719974 . C . PASS END=10719983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:28,0 chr1 10719984 . C . PASS END=10719988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 10719989 . C . PASS END=10719989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10719990 . A . PASS END=10719995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,931:0,67,255:26,0 chr1 10719996 . C . PASS END=10719996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10719997 . C . PASS END=10720034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,868:0,65,255:26,0 chr1 10720035 . C . PASS END=10720036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 10720037 . C . PASS END=10720039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:26,0 chr1 10720040 . C . PASS END=10720044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10720045 . G . PASS END=10720045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 10720046 . T . PASS END=10720051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 10720052 . G . PASS END=10720059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 10720060 . G . PASS END=10720060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:23,0 chr1 10720061 . G . PASS END=10720064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1007:0,71,255:25,0 chr1 10720065 . T . PASS END=10720065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,738:0,9,255:21,0 chr1 10720066 . T . PASS END=10720067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:25,0 chr1 10720068 . A . PASS END=10720069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10720070 . A . PASS END=10720072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,841:0,67,255:27,0 chr1 10720073 . C . PASS END=10720074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 10720075 . C . PASS END=10720075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 10720076 . C . PASS END=10720076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 10720077 . A . PASS END=10720077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 10720078 . G . PASS END=10720078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 10720079 . G . PASS END=10720079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 10720080 . T . PASS END=10720080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 10720081 . C . PASS END=10720107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,984:0,68,255:26,0 chr1 10720108 . T . PASS END=10720108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr1 10720109 . C . PASS END=10720122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,900:0,72,255:25,0 chr1 10720123 . G . PASS END=10720123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 10720124 . C . PASS END=10720133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,900:0,72,255:24,0 chr1 10720134 . C . PASS END=10720134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 10720135 . C . PASS END=10720140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 10720141 . T . PASS END=10720141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 10720142 . C . PASS END=10720144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 10720145 . T . PASS END=10720145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,687:0,55,255:22,0 chr1 10720146 . T . PASS END=10720191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,868:0,65,255:24,0 chr1 10720192 . G . PASS END=10720192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 10720193 . C . PASS END=10720194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 10720195 . T . PASS END=10720219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 10720220 . G . PASS END=10720236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 10720237 . T . PASS END=10720237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 10720238 . G . PASS END=10720250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 10720251 . G . PASS END=10720256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 10720257 . C . PASS END=10720265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 10720266 . A . PASS END=10720266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 10720267 . G . PASS END=10720274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 10720275 . C . PASS END=10720280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 10720281 . A . PASS END=10720281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 10720282 . G . PASS END=10720295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1062:0,84,255:35,0 chr1 10720296 . T . PASS END=10720296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:32,0 chr1 10720297 . C . PASS END=10720317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1294:0,89,255:33,0 chr1 10720318 . T . PASS END=10720318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1174:0,74,255:32,0 chr1 10720319 . C . PASS END=10720344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1173:0,83,255:34,0 chr1 10720345 . G . PASS END=10720345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr1 10720346 . C . PASS END=10720348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 10720349 . C . PASS END=10720349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 10720350 . T . PASS END=10720372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1200:0,83,255:34,0 chr1 10720373 . G . PASS END=10720406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,887:0,78,255:26,0 chr1 10720407 . C . PASS END=10720408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10720409 . G . PASS END=10720410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 10720411 . G . PASS END=10720414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 10720415 . A . PASS END=10720416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 10720417 . C . PASS END=10720420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr1 10720421 . G . PASS END=10720471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 10720472 . C . PASS END=10720499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,665:0,41,255:19,0 chr1 10720500 . A . PASS END=10720507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 10720508 . C . PASS END=10720508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 10720509 . C . PASS END=10720544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 10720545 . A . PASS END=10720554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:19,0 chr1 10720555 . T . PASS END=10720555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 10720556 . G . PASS END=10720558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 10720559 . G . PASS END=10720561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 10720562 . G . PASS END=10720562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 10720563 . G . PASS END=10720591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 10720592 . T . PASS END=10720593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 10725140 . C . PASS END=10725157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 10725158 . T . PASS END=10725160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:28,1 chr1 10725161 . G . PASS END=10725208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1080:0,80,255:37,0 chr1 10725209 . G . PASS END=10725209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 10725210 . G . PASS END=10725226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,98,255:36,0 chr1 10725227 . A . PASS END=10725227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:31,0 chr1 10725228 . G . PASS END=10725234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1263:0,89,255:35,0 chr1 10725235 . T . PASS END=10725235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:34,0 chr1 10725236 . C . PASS END=10725264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1227:0,88,255:34,0 chr1 10725265 . T . PASS END=10725266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 10725267 . G . PASS END=10725268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 10725269 . G . PASS END=10725269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 10725270 . C . PASS END=10725274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 10725275 . C . PASS END=10725287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:27:0,71,1039:0,71,255:26,0 chr1 10725288 . C . PASS END=10725298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:28,0 chr1 10725299 . G . PASS END=10725319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,908:0,61,255:26,0 chr1 10725320 . T . PASS END=10725328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 10725329 . A . PASS END=10725329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 10725330 . C . PASS END=10725330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 10725331 . A . PASS END=10725339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,994:0,68,255:26,0 chr1 10725340 . G . PASS END=10725341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 10725342 . T . PASS END=10725342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 10725343 . G . PASS END=10725343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 10725344 . C . PASS END=10725349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 10725350 . C . PASS END=10725361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 10725362 . C . PASS END=10725364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 10725365 . C . PASS END=10725365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 10725366 . G . PASS END=10725368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 10725369 . C . PASS END=10725386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,939:0,64,255:25,0 chr1 10725387 . T C, 50.00 PASS DP=25;MQ=247.91;MQRankSum=3.538;ReadPosRankSum=0.991;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,16,0:0.640,0.000:25:2,8,0:7,8,0:46:85,0,45,572,293,865:255,0,251:9,0:5.0000e+01,1.0691e-04,4.8360e+01,4.5000e+02,3.2781e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,8,7,9:8,1,5,11 chr1 10725388 . G . PASS END=10725406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 10725407 . C . PASS END=10725424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 10725425 . C . PASS END=10725426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:16,0 chr1 10725427 . G . PASS END=10725460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 10725461 . G . PASS END=10725464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 10725465 . C . PASS END=10725483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 10725484 . G . PASS END=10725500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 10725501 . A . PASS END=10725504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 10725505 . C . PASS END=10725511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 10725512 . C . PASS END=10725512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr1 10725513 . C . PASS END=10725568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:33,0 chr1 10725569 . T . PASS END=10725577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:26,0 chr1 10725578 . G . PASS END=10725604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 10725605 . G . PASS END=10725625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:23:0,60,900:0,69,255:26,0 chr1 10725626 . C . PASS END=10725628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 10753931 . C . PASS END=10753956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:44:0,96,1513:0,96,255:40,0 chr1 10753957 . T . PASS END=10753957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:35:43:0,35,1374:0,35,255:37,0 chr1 10753958 . T . PASS END=10753969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1395:0,90,255:37,0 chr1 10754354 . C . PASS END=10754376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1036:0,90,255:31,0 chr1 10754377 . A . PASS END=10754377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:28,0 chr1 10754378 . A . PASS END=10754378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 10754379 . T . PASS END=10754379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:28,0 chr1 10754380 . T . PASS END=10754385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 10754386 . A . PASS END=10754386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 10754387 . A . PASS END=10754392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,997:0,87,255:29,0 chr1 10754393 . C . PASS END=10754402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:26,0 chr1 11007720 . T . PASS END=11007745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,619:0,40,255:19,0 chr1 11007746 . C . PASS END=11007779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 11007780 . G . PASS END=11007780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 11007781 . C . PASS END=11007804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 11007805 . G . PASS END=11007806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11007807 . C . PASS END=11007807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11007808 . T . PASS END=11007815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 11007816 . C . PASS END=11007816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11007817 . T . PASS END=11007821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11007822 . C . PASS END=11007824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 11007825 . G . PASS END=11007856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,662:0,41,255:19,0 chr1 11007857 . A . PASS END=11007858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 11007859 . T . PASS END=11007861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11007862 . A . PASS END=11007868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11007869 . C . PASS END=11007887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 11007888 . T . PASS END=11007888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:13,0 chr1 11007889 . C . PASS END=11007900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 11007901 . C . PASS END=11007901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 11007902 . A . PASS END=11007952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr1 11007953 . A . PASS END=11008001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:13,0 chr1 11008002 . C . PASS END=11008002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 11008003 . T . PASS END=11008003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 11008004 . G . PASS END=11008029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 11008030 . T . PASS END=11008030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 11008031 . C . PASS END=11008031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11008032 . G . PASS END=11008037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11008038 . C . PASS END=11008057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:15,0 chr1 11008058 . C . PASS END=11008061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 11008062 . T . PASS END=11008084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 11008085 . G . PASS END=11008085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 11008086 . A . PASS END=11008108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,631:0,51,255:19,0 chr1 11008109 . G . PASS END=11008109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 11008110 . C . PASS END=11008122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 11008123 . A . PASS END=11008123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 11008124 . T . PASS END=11008125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 11008126 . C . PASS END=11008126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 11008127 . C . PASS END=11008182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr1 11008183 . G . PASS END=11008185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11008186 . G . PASS END=11008186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 11008187 . T . PASS END=11008188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11008189 . G . PASS END=11008189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 11008190 . A . PASS END=11008190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11008191 . G . PASS END=11008191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:18,0 chr1 11008192 . A . PASS END=11008201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 11008202 . C . PASS END=11008214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 11008215 . G . PASS END=11008229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 11008230 . C . PASS END=11008231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 11008232 . C . PASS END=11008232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 11008233 . C . PASS END=11008233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11008234 . T . PASS END=11008247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 11008248 . T . PASS END=11008252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11008253 . C . PASS END=11008253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11008254 . T . PASS END=11008254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11008255 . G . PASS END=11008261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 11008262 . A . PASS END=11008272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,31,255:13,0 chr1 11008273 . T . PASS END=11008282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 11008283 . C . PASS END=11008292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 11008293 . G . PASS END=11008295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 11008296 . G . PASS END=11008297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11008298 . G . PASS END=11008421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,513:0,40,255:19,0 chr1 11008422 . T . PASS END=11008422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 11008423 . G . PASS END=11008451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,560:0,40,255:18,0 chr1 11008452 . C . PASS END=11008453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 11008454 . C . PASS END=11008459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:17,0 chr1 11008460 . T . PASS END=11008496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 11008497 . G C, 49.89 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=3.062;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:4,4,0:6,5,0:48:85,0,50,306,350,655:255,0,255:8,0:4.9887e+01,6.6269e-05,5.3000e+01,3.0586e+02,3.8440e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,6,3:4,6,5,4 chr1 11008498 . C . PASS END=11008512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,652:0,43,255:18,0 chr1 11008513 . G . PASS END=11008513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 11008514 . G . PASS END=11008526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr1 11008527 . C . PASS END=11008528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 11008529 . T . PASS END=11008534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11008535 . G . PASS END=11008535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11008536 . G . PASS END=11008554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,869:0,63,255:24,0 chr1 11008555 . G . PASS END=11008555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 11008556 . T . PASS END=11008572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,925:0,75,255:25,0 chr1 11008573 . A . PASS END=11008573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 11008574 . G . PASS END=11008578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:24,0 chr1 11008579 . A . PASS END=11008579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,950:0,48,255:23,0 chr1 11008580 . C . PASS END=11008601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,894:0,71,255:26,0 chr1 11008602 . T . PASS END=11008602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 11008603 . G . PASS END=11008610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:23,0 chr1 11008611 . T . PASS END=11008611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 11008612 . C . PASS END=11008644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,937:0,62,255:25,0 chr1 11008645 . G . PASS END=11008645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 11008646 . A . PASS END=11008657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 11008658 . A . PASS END=11008694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,917:0,67,255:26,0 chr1 11008695 . T C, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.480;ReadPosRankSum=3.285;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:10,5,0:4,9,0:48:85,0,50,498,464,962:255,0,255:12,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,11,7,7:7,7,10,4 chr1 11008696 . G . PASS END=11008721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr1 11008722 . G . PASS END=11008723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 11008724 . C . PASS END=11008724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 11008725 . A . PASS END=11008732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 11008733 . C . PASS END=11008750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:18,0 chr1 11008751 . T . PASS END=11008751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 11008752 . G . PASS END=11008767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 11008768 . T . PASS END=11008768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 11008769 . G . PASS END=11008772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr1 11008773 . A . PASS END=11008773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 11008774 . G . PASS END=11008788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 11008789 . C . PASS END=11008789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 11008790 . C . PASS END=11008812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,482:0,39,255:13,0 chr1 11008813 . T . PASS END=11008815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:15,0 chr1 11008816 . G . PASS END=11008816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:14,0 chr1 11008817 . C . PASS END=11008826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 11008827 . T . PASS END=11008834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 11008835 . G . PASS END=11008836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr1 11008837 . A . PASS END=11008850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,451:0,39,255:13,0 chr1 11008851 . C . PASS END=11008851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 11008852 . T . PASS END=11008852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 11008853 . G . PASS END=11008859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11008860 . T . PASS END=11008860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:12,0 chr1 11008861 . C . PASS END=11008867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 11008868 . G . PASS END=11008868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 11008869 . T . PASS END=11008879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 11008880 . G . PASS END=11008880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 11008881 . C . PASS END=11008881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 11008882 . A . PASS END=11008882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 11008883 . G . PASS END=11008890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr1 11008891 . C . PASS END=11008901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 11009615 . C . PASS END=11009823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1151:0,92,255:40,0 chr1 11009824 . G . PASS END=11009839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,65,255:26,0 chr1 11009840 . A . PASS END=11009871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,651:0,46,255:17,0 chr1 11014076 . C . PASS END=11014080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11014081 . C . PASS END=11014099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,922:0,69,255:25,0 chr1 11014100 . C . PASS END=11014100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 11014101 . T . PASS END=11014101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 11014102 . G . PASS END=11014107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 11014108 . A . PASS END=11014108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 11014109 . G . PASS END=11014117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:30,0 chr1 11014118 . C T, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=4.095;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,16,0:0.533,0.000:30:9,4,0:5,12,0:48:85,0,50,572,493,1065:255,0,255:14,0:5.0000e+01,6.6786e-05,5.2710e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,8,8:9,5,8,8 chr1 11014119 . A . PASS END=11014119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 11014120 . G . PASS END=11014120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 11014121 . C . PASS END=11014128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 11014129 . G . PASS END=11014129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 11014130 . C . PASS END=11014141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1034:0,90,255:30,0 chr1 11014142 . T . PASS END=11014144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11014145 . G . PASS END=11014145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11014146 . G . PASS END=11014155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,74,255:26,0 chr1 11014156 . T . PASS END=11014163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,947:0,64,255:24,0 chr1 11014164 . T . PASS END=11014164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 11014165 . T . PASS END=11014165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 11014166 . G . PASS END=11014166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 11014167 . T . PASS END=11014194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,894:0,72,255:25,0 chr1 11014195 . C . PASS END=11014199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,56,255:19,0 chr1 11015047 . C . PASS END=11015048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 11015049 . G . PASS END=11015049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 11015050 . G . PASS END=11015120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:31:0,89,1166:0,89,255:37,0 chr1 11015121 . T . PASS END=11015121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr1 11015122 . G . PASS END=11015127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1357:0,105,255:36,0 chr1 11015128 . G . PASS END=11015155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1294:0,89,255:35,0 chr1 11015156 . G . PASS END=11015156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 11015157 . T . PASS END=11015162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:29,0 chr1 11015163 . C . PASS END=11015164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 11015165 . A G, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.664;ReadPosRankSum=2.022;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,18,0:0.581,0.000:31:8,10,0:5,8,0:47:85,0,48,624,407,1031:255,0,255:10,0:5.0000e+01,7.8694e-05,5.0911e+01,4.5000e+02,4.4251e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,6,12:8,5,10,8 chr1 11015166 . T . PASS END=11015167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 11015168 . T . PASS END=11015171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11015172 . A . PASS END=11015172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:25,0 chr1 11015173 . A . PASS END=11015180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1003:0,87,255:29,0 chr1 11015181 . T . PASS END=11015181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 11015182 . G . PASS END=11015187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11015188 . A . PASS END=11015202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,978:0,67,255:27,0 chr1 11015203 . G . PASS END=11015209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,892:0,69,255:23,0 chr1 11015210 . T . PASS END=11015236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 11015237 . A . PASS END=11015237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:14,0 chr1 11015238 . A . PASS END=11015240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 11015241 . A . PASS END=11015242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 11015243 . A . PASS END=11015243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 11017080 . C . PASS END=11017080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 11017081 . C . PASS END=11017099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 11017100 . A . PASS END=11017100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 11017101 . A . PASS END=11017147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,816:0,63,255:24,0 chr1 11017148 . G . PASS END=11017164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 11017642 . C . PASS END=11017659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 11017660 . G . PASS END=11017660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,2 chr1 11017661 . C . PASS END=11017661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1110:0,30,255:28,2 chr1 11017662 . C . PASS END=11017662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 11017663 . C . PASS END=11017671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 11017672 . C . PASS END=11017678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11017679 . C . PASS END=11017679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 11017680 . C . PASS END=11017689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 11017690 . G . PASS END=11017690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 11017691 . G . PASS END=11017696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1123:0,80,255:28,0 chr1 11017697 . T . PASS END=11017697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:30:32:0,30,882:0,30,255:27,0 chr1 11017698 . C . PASS END=11017758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1141:0,82,255:33,0 chr1 11017759 . C . PASS END=11017798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 11017799 . C . PASS END=11017810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,615:0,40,255:19,0 chr1 11018771 . C . PASS END=11018803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,870:0,63,255:25,0 chr1 11018804 . G . PASS END=11018805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 11018806 . A . PASS END=11018806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:19,0 chr1 11018807 . G . PASS END=11018807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 11018808 . A . PASS END=11018809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 11024185 . C . PASS END=11024215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:26,0 chr1 11024216 . T . PASS END=11024315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1102:0,84,255:40,0 chr1 11024316 . T . PASS END=11024328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr1 11026415 . C . PASS END=11026415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 11026416 . T . PASS END=11026416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:27,0 chr1 11026417 . C . PASS END=11026427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1117:0,93,255:33,0 chr1 11026428 . A . PASS END=11026529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1055:0,81,255:40,0 chr1 11026530 . C . PASS END=11026530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:26,0 chr1 11026531 . T . PASS END=11026539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1031:0,81,255:27,0 chr1 11030027 . C . PASS END=11030040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr1 11030041 . G . PASS END=11030056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 11030057 . G . PASS END=11030084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,747:0,60,255:22,0 chr1 11030085 . G . PASS END=11030085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 11030086 . A . PASS END=11030087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11030088 . C . PASS END=11030139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr1 11030140 . G . PASS END=11030140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 11030141 . A . PASS END=11030141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11030142 . T . PASS END=11030142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 11030143 . G . PASS END=11030145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11030146 . T . PASS END=11030146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 11036213 . C . PASS END=11036221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr1 11036222 . C . PASS END=11036222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 11036223 . T . PASS END=11036226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 11036227 . G . PASS END=11036267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1017:0,81,255:33,0 chr1 11036268 . G . PASS END=11036268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 11036269 . C . PASS END=11036279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 11036280 . C . PASS END=11036281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 11036282 . C . PASS END=11036284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11036285 . T . PASS END=11036302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:25,0 chr1 11036303 . G . PASS END=11036307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,790:0,53,255:20,0 chr1 11036308 . A . PASS END=11036308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11036309 . C . PASS END=11036313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 11042069 . C . PASS END=11042075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 11042076 . G . PASS END=11042076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11042077 . T . PASS END=11042077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11042078 . G . PASS END=11042089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 11042090 . C . PASS END=11042094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11072687 . G . PASS END=11072687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11072696 . G . PASS END=11072696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 11072736 . G . PASS END=11072736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11072771 . C . PASS END=11072771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11073785 . A . PASS END=11073794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 11073795 . A . PASS END=11073800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11073801 . G . PASS END=11073801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 11073802 . G . PASS END=11073803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 11073804 . T . PASS END=11073804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 11073805 . A . PASS END=11073849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,366:0,30,255:12,0 chr1 11073850 . C . PASS END=11073856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 11073857 . A . PASS END=11073859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11073860 . G . PASS END=11073861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11073862 . G . PASS END=11073867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 11073868 . C . PASS END=11073874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 11073875 . G . PASS END=11073875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 11073876 . T . PASS END=11073895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 11073896 . G . PASS END=11073896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 11073897 . C . PASS END=11073904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 11073905 . C . PASS END=11073907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr1 11073908 . C . PASS END=11073918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,553:0,45,255:16,0 chr1 11073919 . T . PASS END=11073919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 11073920 . C . PASS END=11073923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11073924 . T . PASS END=11073924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 11073925 . G . PASS END=11073933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 11073934 . T . PASS END=11073941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,512:0,31,255:13,0 chr1 11073942 . G . PASS END=11073963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 11073964 . T . PASS END=11073999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:13,0 chr1 11074000 . G . PASS END=11074017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 11074018 . A . PASS END=11074018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 11074019 . A . PASS END=11074022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 11076901 . A . PASS END=11077064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:41:0,90,1350:0,107,255:40,0 chr1 11078790 . G . PASS END=11078930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:49:0,102,1530:0,117,255:40,0 chr1 11080486 . C . PASS END=11080519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:29:0,85,1040:0,85,255:36,0 chr1 11080520 . T . PASS END=11080520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:34,0 chr1 11080521 . G . PASS END=11080596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:37:0,84,1352:0,84,255:40,0 chr1 11080597 . G . PASS END=11080597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr1 11080598 . A . PASS END=11080621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1248:0,92,255:34,0 chr1 11080622 . G . PASS END=11080636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:26,0 chr1 11080637 . T . PASS END=11080637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:22,0 chr1 11080638 . T . PASS END=11080656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 11082181 . A . PASS END=11082379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1250:0,81,255:40,0 chr1 11082380 . G . PASS END=11082380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:32,0 chr1 11082381 . T . PASS END=11082711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:35:0,87,1349:0,87,255:40,0 chr1 11082767 . C . PASS END=11082767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 11082794 . T . PASS END=11082794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:75:0,120,1800:0,192,255:40,0 chr1 11082840 . T . PASS END=11082840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 11082853 . T . PASS END=11082853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,252,255:40,0 chr1 11082870 . A . PASS END=11082870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,240,255:40,0 chr1 11082925 . T . PASS END=11082925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,211,255:40,0 chr1 11083017 . C . PASS END=11083017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 11083212 . C . PASS END=11083240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,177,255:40,0 chr1 11083250 . T . PASS END=11083305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:76:0,120,1800:0,182,255:40,0 chr1 11083320 . G . PASS END=11083384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:49:0,108,1620:0,123,255:40,0 chr1 11083408 . G . PASS END=11083408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 11084305 . A . PASS END=11084305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 11084333 . A . LowGQ END=11084333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,13:69:0:69:0,0,1592:255,0,255:40,18 chr1 11084506 . A . PASS END=11084506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,238,255:40,0 chr1 11084716 . T . PASS END=11084716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 11084740 . C . PASS END=11084740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 11084757 . T . PASS END=11084757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 11084834 . T . PASS END=11084834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 11084865 . G . PASS END=11084865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 11084963 . A . PASS END=11084963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:36:51:0,36,540:0,153,255:12,0 chr1 11084971 . T . PASS END=11084971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:33:43:0,33,495:0,129,255:11,0 chr1 11085045 . G . PASS END=11085045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,218,255:40,0 chr1 11085071 . C . PASS END=11085071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,238,255:40,0 chr1 11085167 . C . PASS END=11085243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,117,1667:0,119,255:40,0 chr1 11085247 . G . PASS END=11085247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,114,1710:0,116,255:37,0 chr1 11085460 . T . PASS END=11085461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,128,255:40,0 chr1 11085484 . A . PASS END=11085484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 11085531 . A . LowGQ END=11085531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:0:55:0,0,1558:106,0,255:40,8 chr1 11085534 . T . PASS END=11085534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 11086631 . A . PASS END=11086631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 11086660 . G . PASS END=11086660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 11086722 . T . PASS END=11086723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11086730 . T . PASS END=11086730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 11086753 . C . PASS END=11086753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11086771 . T . PASS END=11086771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11086831 . G . PASS END=11086831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 11086878 . G . PASS END=11086878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11086942 . T . PASS END=11086962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:32,0 chr1 11086963 . C . PASS END=11086963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 11086964 . T . PASS END=11087160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1190:0,81,255:40,0 chr1 11087161 . A . PASS END=11087161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1313:0,73,255:35,0 chr1 11087162 . G . PASS END=11087403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:32:0,81,1158:0,83,255:40,0 chr1 11087404 . T . PASS END=11087404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:30,0 chr1 11087405 . A . PASS END=11087407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:32,0 chr1 11087408 . T . PASS END=11087408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:31,0 chr1 11087409 . C . PASS END=11087413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:31,0 chr1 11087414 . T . PASS END=11087417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:63:34:0,63,1075:0,63,255:32,0 chr1 11087418 . A . PASS END=11087421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr1 11087422 . A . PASS END=11087422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:29,0 chr1 11087423 . G . PASS END=11087423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 11087424 . C . PASS END=11087429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:32,0 chr1 11087430 . G . PASS END=11087445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:26:0,63,1000:0,63,255:26,0 chr1 11087446 . T . PASS END=11087446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:23,0 chr1 11087447 . A . PASS END=11087466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 11087467 . G . PASS END=11087486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1208:0,83,255:39,0 chr1 11087487 . A . PASS END=11087523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1344:0,81,255:40,0 chr1 11087524 . G A, 167.64 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,19,0:0,22,0:118:205,121,0,1406,121,1406:255,123,0:0,0:1.6764e+02,1.1764e+02,0.0000e+00,4.5000e+02,1.5241e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,15:0,0,20,21 chr1 11087525 . G . PASS END=11087561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:41:0,85,1460:0,85,255:40,0 chr1 11087562 . C . PASS END=11087664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:39:0,84,1260:0,101,255:40,0 chr1 11087665 . A . PASS END=11087680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,74,255:24,0 chr1 11087681 . G . PASS END=11087705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 11090233 . C . PASS END=11090307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,147,255:40,0 chr1 11090805 . C . PASS END=11090830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,768:0,63,255:26,0 chr1 11090831 . G . PASS END=11090878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,964:0,80,255:34,0 chr1 11090879 . G . PASS END=11090903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1249:0,89,255:34,0 chr1 11090904 . C . PASS END=11090904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 11090905 . A . PASS END=11090906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11090907 . T . PASS END=11090915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 11090916 . C A, 133.36 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,17,0:0,12,0:83:171,86,0,1047,86,1047:255,87,0:0,0:1.3336e+02,8.3355e+01,0.0000e+00,4.5000e+02,1.1813e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,18:0,0,9,20 chr1 11090917 . A . PASS END=11090932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:24,0 chr1 11090933 . T . PASS END=11090939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,707:0,49,255:19,0 chr1 11094885 . T . PASS END=11094893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1157:0,82,255:33,0 chr1 11094894 . C . PASS END=11094894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 11094895 . G . PASS END=11094914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1352:0,95,255:37,0 chr1 11094915 . A . PASS END=11094915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:34,0 chr1 11094916 . T . PASS END=11094929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1230:0,92,255:36,0 chr1 11094930 . A . PASS END=11094930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:34,0 chr1 11094931 . A . PASS END=11094959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1192:0,91,255:36,0 chr1 11094960 . G . PASS END=11094960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 11094961 . A . PASS END=11094963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1341:0,108,255:36,0 chr1 11097750 . T . PASS END=11097769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1048:0,87,255:40,0 chr1 11097770 . T . PASS END=11097770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1380:0,76,255:39,0 chr1 11097771 . C . PASS END=11097777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1520:0,110,255:40,0 chr1 11097778 . A . PASS END=11097778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1342:0,71,255:39,0 chr1 11097779 . A . PASS END=11097944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,111,1606:0,116,255:40,0 chr1 11102932 . C . PASS END=11102940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:25,0 chr1 11102941 . T . PASS END=11102941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 11102942 . G . PASS END=11102950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 11102951 . C . PASS END=11103068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:29:0,87,1072:0,87,255:39,0 chr1 11103069 . T . PASS END=11103069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 11103070 . C . PASS END=11103075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1042:0,93,255:31,0 chr1 11103076 . G . PASS END=11103076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 11103077 . A . PASS END=11103077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 11103078 . A . PASS END=11103078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 11103079 . T . PASS END=11103079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 11103396 . C . PASS END=11103401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1164:0,93,255:31,0 chr1 11103402 . A . PASS END=11103402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1037:0,60,255:28,0 chr1 11103403 . A . PASS END=11103403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 11103404 . A . PASS END=11103404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 11103405 . G . PASS END=11103408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 11103409 . T . PASS END=11103409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 11103410 . A . PASS END=11103562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:31:0,87,1247:0,93,255:40,0 chr1 11103563 . T . PASS END=11103563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1191:0,66,255:30,0 chr1 11103564 . C . PASS END=11103571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,94,255:31,0 chr1 11103572 . A . PASS END=11103592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr1 11104997 . C . PASS END=11105000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11105001 . A . PASS END=11105001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 11105002 . G . PASS END=11105002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11105003 . G . PASS END=11105003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 11105004 . C . PASS END=11105010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 11105465 . C . PASS END=11105474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11105475 . G . PASS END=11105477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 11105478 . C . PASS END=11105479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 11105480 . T . PASS END=11105525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,703:0,62,255:26,0 chr1 11105526 . G . PASS END=11105527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11105528 . C . PASS END=11105528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 11105529 . C . PASS END=11105529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11105530 . A . PASS END=11105530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,879:0,67,255:26,0 chr1 11105531 . G . PASS END=11105531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11105532 . G . PASS END=11105532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 11105533 . T . PASS END=11105534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 11105535 . G . PASS END=11105535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 11105536 . T . PASS END=11105550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 11105551 . T . PASS END=11105591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,825:0,61,255:26,0 chr1 11105592 . A . PASS END=11105596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 11106612 . C . PASS END=11106620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr1 11106621 . G . PASS END=11106621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr1 11106622 . C . PASS END=11106624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11106625 . A . PASS END=11106629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11106630 . G . PASS END=11106662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,896:0,84,255:28,0 chr1 11106663 . T . PASS END=11106663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 11106664 . A . PASS END=11106675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr1 11106676 . A . PASS END=11106677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11106678 . G . PASS END=11106681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 11106682 . T . PASS END=11106682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11106683 . G . PASS END=11106683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11106684 . T . PASS END=11106687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1070:0,74,255:27,0 chr1 11106688 . G . PASS END=11106691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 11106692 . G . PASS END=11106696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11106697 . C . PASS END=11106708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 11106709 . A . PASS END=11106746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 11106747 . T . PASS END=11106756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:15,0 chr1 11106757 . A . PASS END=11106757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 11106758 . C . PASS END=11106760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 11106761 . C . PASS END=11106768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 11106769 . G . PASS END=11106771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 11106772 . C . PASS END=11106790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 11106942 . C . PASS END=11106942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 11106948 . C . PASS END=11106949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr1 11106950 . T . PASS END=11106950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 11106951 . G . PASS END=11106960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:24,0 chr1 11106961 . T . PASS END=11106961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 11106962 . A . PASS END=11106984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:25,0 chr1 11106985 . A . PASS END=11106985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 11106986 . G . PASS END=11107000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 11107001 . A . PASS END=11107006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,810:0,53,255:19,0 chr1 11107007 . G . PASS END=11107011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11107012 . A . PASS END=11107012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 11107013 . G . PASS END=11107021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 11107022 . C . PASS END=11107022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 11107023 . G . PASS END=11107029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 11107030 . G . PASS END=11107036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 11107037 . G . PASS END=11107037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 11107038 . G . PASS END=11107084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,628:0,43,255:19,0 chr1 11107085 . G . PASS END=11107085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 11107086 . G . PASS END=11107087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11107088 . A . PASS END=11107088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 11107089 . T . PASS END=11107096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 11107097 . G . PASS END=11107097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 11107098 . C . PASS END=11107099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 11107100 . C . PASS END=11107108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 11107109 . G . PASS END=11107138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 11107139 . C . PASS END=11107160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 11107161 . C . PASS END=11107161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 11107162 . A . PASS END=11107167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,459:0,39,255:13,0 chr1 11107168 . G . PASS END=11107168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 11107169 . T . PASS END=11107169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 11107170 . C . PASS END=11107170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 11107171 . A . PASS END=11107171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 11107172 . G . PASS END=11107172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 11107173 . C . PASS END=11107175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 11107176 . C . PASS END=11107176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 11107260 . C . PASS END=11107264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 11114922 . T . PASS END=11114922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 11114923 . C . PASS END=11114923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 11114924 . A . PASS END=11115078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,590:0,41,255:19,0 chr1 11115079 . C . PASS END=11115080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 11115081 . G . PASS END=11115122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:17,0 chr1 11115123 . G . PASS END=11115123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 11115124 . C . PASS END=11115124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11115125 . T . PASS END=11115125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr1 11115126 . C . PASS END=11115126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11115127 . C . PASS END=11115132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11115133 . G . PASS END=11115138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 11115139 . G . PASS END=11115139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 11115140 . C . PASS END=11115140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 11115141 . T . PASS END=11115141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 11115743 . A . PASS END=11115750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 11115751 . T . PASS END=11115751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 11115752 . G . PASS END=11115755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 11115756 . G . PASS END=11115756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 11115757 . C . PASS END=11115758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 11115759 . A . PASS END=11115761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 11115762 . G . PASS END=11115762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 11115763 . C . PASS END=11115783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 11115784 . T . PASS END=11115784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 11115785 . C . PASS END=11115800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr1 11115801 . T . PASS END=11115802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 11115803 . C . PASS END=11115824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 11115825 . A . PASS END=11115825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,390:0,3,255:13,1 chr1 11115826 . C . PASS END=11115826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:10:15:0,10,463:0,10,255:14,1 chr1 11115827 . C . PASS END=11115827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:15,0 chr1 11115828 . C . PASS END=11115842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,438:0,45,255:15,0 chr1 11115843 . T . PASS END=11115844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11115845 . T . PASS END=11115848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 11115849 . T . PASS END=11115849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 11115850 . G . PASS END=11115876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,582:0,41,255:19,0 chr1 11115877 . G . PASS END=11115881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 11115882 . A . PASS END=11115887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 11115888 . G . PASS END=11115899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 11115900 . A . PASS END=11115937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1163:0,80,255:31,0 chr1 11115938 . T . PASS END=11115948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11115949 . C . PASS END=11115950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11115951 . T . PASS END=11115952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1008:0,68,255:26,0 chr1 11115953 . A . PASS END=11115955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 11115956 . A . PASS END=11115957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11115958 . G . PASS END=11115964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 11115965 . T . PASS END=11115980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1047:0,71,255:26,0 chr1 11115981 . C . PASS END=11115983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11116068 . C . PASS END=11116079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:43:0,91,1499:0,91,255:40,0 chr1 11116080 . G . PASS END=11116080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1504:0,74,255:40,0 chr1 11116081 . G . PASS END=11116151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:40:0,82,1360:0,82,255:40,0 chr1 11116661 . C . PASS END=11116814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:38:0,88,1346:0,88,255:40,0 chr1 11118767 . C . PASS END=11118806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:30:0,85,1180:0,85,255:40,0 chr1 11118807 . T . PASS END=11118843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,143,255:40,0 chr1 11118844 . C T, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.512;ReadPosRankSum=5.085;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,34,0:0.576,0.000:59:12,21,0:13,13,0:47:85,0,48,1208,865,2073:255,0,255:25,0:5.0000e+01,7.8953e-05,5.0863e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,18,16:12,13,19,15 chr1 11118845 . G . PASS END=11118881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,161,255:40,0 chr1 11118882 . G . PASS END=11118949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,111,1665:0,125,255:40,0 chr1 11119282 . C . PASS END=11119365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:35:0,84,1173:0,84,255:40,0 chr1 11119366 . G . PASS END=11119377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1062:0,74,255:25,0 chr1 11119378 . C . PASS END=11119378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11119379 . A . PASS END=11119379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr1 11119380 . C . PASS END=11119385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 11119386 . C . PASS END=11119394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 11119395 . A . PASS END=11119395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,900:0,37,255:19,0 chr1 11119396 . G . PASS END=11119418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,65,255:24,0 chr1 11119419 . A . PASS END=11119419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 11119420 . G . PASS END=11119426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 11119427 . A . PASS END=11119455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:19,0 chr1 11119456 . A . PASS END=11119456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11119457 . C . PASS END=11119468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:16,1 chr1 11119469 . C . PASS END=11119469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 11119470 . T . PASS END=11119470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,527:0,17,255:11,0 chr1 11119471 . G . PASS END=11119482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,35,255:13,0 chr1 11119483 . T . PASS END=11119483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:9,0 chr1 11119484 . C . PASS END=11119491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:10,0 chr1 11119834 . C . LowGQ END=11119834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:9,0,187:6,0 chr1 11119835 . T . PASS END=11119838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 11119839 . G . LowGQ END=11119839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:9,0,187:6,0 chr1 11119840 . A . PASS END=11119842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 11119843 . A . PASS END=11119843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 11119844 . C . PASS END=11119844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 11119845 . G . LowGQ END=11119846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,122:0,0,148:7,0 chr1 11119847 . G . PASS END=11119847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 11119848 . G . PASS END=11119848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 11119849 . A . LowGQ END=11119849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,208:28,0,236:7,0 chr1 11119850 . T . PASS END=11119850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 11119851 . G . PASS END=11119851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 11119852 . T . PASS END=11119852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 11119853 . C . PASS END=11119853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr1 11119854 . C . LowGQ END=11119854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,230:17,0,247:8,0 chr1 11119855 . T . PASS END=11119857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 11119858 . T . PASS END=11119858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 11119859 . A . PASS END=11119860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 11119861 . C . LowGQ END=11119861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr1 11119862 . G . PASS END=11119864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11119865 . A . PASS END=11119865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr1 11119866 . G . PASS END=11119866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11119867 . C . LowGQ END=11119867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:8,0 chr1 11119868 . G . PASS END=11119869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11119870 . C . LowGQ END=11119870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,286:14,0,255:8,0 chr1 11119871 . G . PASS END=11119871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11119872 . G . PASS END=11119872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 11119873 . T . PASS END=11119875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 11119876 . T . PASS END=11119876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:12,0 chr1 11119877 . G . PASS END=11119877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 11119878 . G . PASS END=11119878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr1 11119879 . A . LowGQ END=11119879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,203:11,0,214:10,0 chr1 11119880 . G . PASS END=11119880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 11119881 . C . PASS END=11119881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,299:0,22,255:12,0 chr1 11119882 . A . PASS END=11119883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,346:0,39,255:13,0 chr1 11119884 . C . PASS END=11119884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,321:0,22,255:12,0 chr1 11119885 . T . PASS END=11119885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,377:0,39,255:13,0 chr1 11119886 . G . PASS END=11119887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,382:0,25,255:13,0 chr1 11119888 . T . PASS END=11119888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:8:14:0,8,313:0,8,255:12,0 chr1 11119889 . C . PASS END=11119893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,423:0,42,255:14,0 chr1 11119894 . T . LowGQ END=11119894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,264:8,0,255:11,0 chr1 11119895 . G . PASS END=11119895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,293:0,25,255:13,0 chr1 11119896 . C . PASS END=11119897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,444:0,42,255:14,0 chr1 11119898 . G . PASS END=11119898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:8:14:0,8,305:0,8,255:12,0 chr1 11119899 . T C, 86.10 PASS DP=13;MQ=246.08;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,8,0:0,5,0:36:124,39,0,224,224,224:255,42,0:0,0:8.6097e+01,3.6097e+01,1.0672e-03,2.2087e+02,2.5564e+02,2.2388e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,9,4:0,0,8,5 chr1 11119900 . G . PASS END=11119900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 11119901 . A . PASS END=11119902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 11119903 . A . PASS END=11119903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11119904 . G . PASS END=11119904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:8:14:0,8,313:0,8,255:11,0 chr1 11119905 . G . PASS END=11119908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11119909 . T . PASS END=11119909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 11119910 . G . PASS END=11119910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:11,0 chr1 11119911 . G . PASS END=11119918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 11119919 . A . PASS END=11119919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,296:0,6,255:10,0 chr1 11119920 . C . PASS END=11119921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 11119922 . G . LowGQ END=11119922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,286:11,0,255:9,0 chr1 11119923 . G . PASS END=11119924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:12,0 chr1 11119925 . T . PASS END=11119926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:10,0 chr1 11119927 . C . PASS END=11119927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 11119928 . A . PASS END=11119928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,305:0,19,255:10,0 chr1 11119929 . G . PASS END=11119929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 11119930 . G . PASS END=11119930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,302:0,3,255:9,0 chr1 11119931 . T . PASS END=11119933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 11119934 . C . PASS END=11119936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 11119937 . G . PASS END=11119937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 11119938 . G . PASS END=11119941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 11119942 . C . LowGQ END=11119942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:7,0 chr1 11119943 . A . PASS END=11119947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:8,0 chr1 11119948 . T . PASS END=11119948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 11119949 . C . PASS END=11119949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 11119950 . G . PASS END=11119950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,286:0,13,255:8,0 chr1 11119951 . C . PASS END=11119953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 11119954 . A . LowGQ END=11119954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,278:9,0,255:8,0 chr1 11119955 . T . PASS END=11119971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,243:8,0 chr1 11119972 . G . PASS END=11119974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 11119975 . G . LowGQ END=11120000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:6,0:6:0:2:0,0,0:0,0,78:3,0 chr1 11126775 . C . PASS END=11126780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,893:0,67,255:26,0 chr1 11126781 . C . PASS END=11126787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 11126788 . C . PASS END=11126789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11126790 . G . PASS END=11126790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 11126791 . T . PASS END=11126791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 11126792 . T . PASS END=11126793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 11126794 . T . PASS END=11126802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:25,0 chr1 11126803 . C . PASS END=11126803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,988:0,56,255:22,0 chr1 11126804 . C . PASS END=11126804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 11126805 . T . PASS END=11126805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:24,0 chr1 11128065 . C . PASS END=11128141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:41:0,96,1485:0,96,255:40,1 chr1 11128702 . C . PASS END=11128763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,120,1800:0,124,255:40,0 chr1 11129616 . C . PASS END=11129727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:83:41:0,83,1389:0,83,255:40,0 chr1 11129728 . C . PASS END=11129728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,10:60:14:60:0,14,1563:0,14,255:40,0 chr1 11129729 . T . PASS END=11129732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,125,255:40,0 chr1 11129733 . C . PASS END=11129733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,8:58:19:58:0,19,1566:0,19,255:40,0 chr1 11129734 . T . PASS END=11129741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:99:54:0,99,1800:0,99,255:40,0 chr1 11129742 . T . PASS END=11129742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:1:53:0,1,1523:0,1,255:40,0 chr1 11129743 . T . PASS END=11129762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:42:0,81,1446:0,81,255:40,0 chr1 11129763 . C . PASS END=11129763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1520:0,77,255:35,0 chr1 11129764 . T . PASS END=11129769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:82:43:0,82,1405:0,82,255:36,0 chr1 11129770 . C . PASS END=11129771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:69:39:0,69,1076:0,69,255:35,0 chr1 11129772 . T . PASS END=11129773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 11129774 . G . PASS END=11129774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:34,0 chr1 11129775 . C . PASS END=11129776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:33,0 chr1 11129777 . G . PASS END=11129777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:33,0 chr1 11129778 . C . PASS END=11129779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 11129780 . T . PASS END=11129780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1155:0,36,255:29,0 chr1 11129781 . T . PASS END=11129783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 11129784 . C . LowGQ END=11129784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1100:0,0,255:28,0 chr1 11129785 . T . PASS END=11129785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 11129786 . A . PASS END=11129786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr1 11129787 . G . PASS END=11129787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1152:0,42,255:23,0 chr1 11130957 . C . PASS END=11131045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,116,1620:0,116,255:40,0 chr1 11132144 . C . PASS END=11132179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:44:0,118,1530:0,118,255:40,0 chr1 11132180 . T . PASS END=11132216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:39:0,90,1390:0,90,255:40,0 chr1 11132217 . G A, 160.44 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,20,0:0,18,0:110:198,113,0,298,298,298:255,117,0:0,0:1.6044e+02,1.1044e+02,0.0000e+00,2.9521e+02,3.2998e+02,2.9822e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,24:0,0,20,18 chr1 11132218 . C . PASS END=11132220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1272:0,80,255:33,0 chr1 11132221 . T . PASS END=11132222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:31,0 chr1 11132223 . G . PASS END=11132224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:35:0,90,1310:0,92,255:31,0 chr1 11132225 . T . PASS END=11132225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr1 11132226 . G . PASS END=11132227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1172:0,85,255:29,0 chr1 11132228 . T . PASS END=11132228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:30,0 chr1 11133991 . T . PASS END=11134007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,134,255:40,0 chr1 11134008 . A . PASS END=11134062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:38:0,108,1620:0,113,255:40,0 chr1 11134063 . A . PASS END=11134063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:36,0 chr1 11134064 . A . PASS END=11134065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1382:0,114,255:38,0 chr1 11134288 . C . PASS END=11134383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,99,1485:0,108,255:40,0 chr1 11136899 . A . PASS END=11137005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:42:0,107,1621:0,107,255:40,0 chr1 11137422 . C . PASS END=11137490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1260:0,87,255:40,0 chr1 11137491 . T . PASS END=11137491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 11137492 . C . PASS END=11137497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11137498 . T . PASS END=11137498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 11137499 . C . PASS END=11137500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1015:0,84,255:28,0 chr1 11137658 . C . PASS END=11137661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 11137662 . G . PASS END=11137664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11137665 . C . PASS END=11137666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 11137667 . G . PASS END=11137671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 11137672 . G . PASS END=11137673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11137674 . G . PASS END=11137678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 11137679 . G . PASS END=11137688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:24,0 chr1 11137689 . A . PASS END=11137690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:24,0 chr1 11137691 . T . PASS END=11137692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:24,0 chr1 11137693 . C . PASS END=11137693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 11137694 . G . PASS END=11137694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 11137695 . G . PASS END=11137708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:25,0 chr1 11139768 . C . PASS END=11139879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:33:0,96,1440:0,99,255:40,0 chr1 11140556 . T . PASS END=11140560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:112:0,120,1800:0,231,255:40,0 chr1 11140561 . C . PASS END=11140606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,2:116:99:112:0,120,1800:0,190,255:40,0 chr1 11140821 . C . PASS END=11140969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1139:0,80,255:40,0 chr1 11141139 . C . PASS END=11141149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,138,255:40,0 chr1 11141150 . T . PASS END=11141186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,109,1800:0,109,255:40,0 chr1 11141187 . C G, 223.65 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,32,0:0,27,0:174:261,177,0,2220,177,2220:255,177,0:0,0:2.2365e+02,1.7365e+02,0.0000e+00,4.5000e+02,2.0842e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,28:0,0,32,27 chr1 11141188 . G . PASS END=11141224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,157,255:40,0 chr1 11141225 . T . PASS END=11141295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:36:0,96,1440:0,104,255:40,0 chr1 11142745 . C . PASS END=11142765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,824:0,61,255:27,0 chr1 11142766 . T . PASS END=11142768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11142769 . T . PASS END=11142769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 11142770 . A . PASS END=11142770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,929:0,54,255:26,0 chr1 11142771 . T . PASS END=11142773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11142774 . C . PASS END=11142774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:28,0 chr1 11142775 . T . PASS END=11142775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 11142776 . T . PASS END=11142776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 11142777 . G . PASS END=11142777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1271:0,99,255:33,0 chr1 11142778 . T . PASS END=11142778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1041:0,66,255:31,0 chr1 11142779 . T . PASS END=11142904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:83:33:0,83,1164:0,83,255:40,0 chr1 11142905 . A . PASS END=11142905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1223:0,75,255:32,0 chr1 11142906 . T . PASS END=11142935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1132:0,83,255:34,0 chr1 11147505 . C . PASS END=11147506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 11147507 . T . PASS END=11147507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 11147508 . A . PASS END=11147648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:34:0,89,1241:0,89,255:40,0 chr1 11147857 . C . PASS END=11147967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:42:0,99,1485:0,110,255:40,1 chr1 11148180 . C . PASS END=11148255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,99,1485:0,105,255:40,0 chr1 11150611 . A . PASS END=11150611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 11150612 . T . PASS END=11150612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 11150613 . G . PASS END=11150682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:33:0,89,1136:0,89,255:40,0 chr1 11150683 . T . PASS END=11150683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:30,0 chr1 11150684 . C . PASS END=11150710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 11150711 . T . PASS END=11150719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:22,0 chr1 11150720 . A . PASS END=11150725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:18,0 chr1 11151071 . C . PASS END=11151236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:43:0,95,1485:0,95,255:40,1 chr1 11151550 . C . PASS END=11151654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:36:0,95,1335:0,95,255:40,0 chr1 11155815 . C . PASS END=11155938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:86:37:0,86,1350:0,86,255:40,0 chr1 11158077 . C . PASS END=11158167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:34:0,95,1296:0,95,255:40,0 chr1 11158168 . G . PASS END=11158168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1775:0,73,255:40,0 chr1 11158169 . G . PASS END=11158209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:37:0,81,1215:0,86,255:40,0 chr1 11158210 . C . PASS END=11158213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,88,255:26,0 chr1 11159778 . C . PASS END=11159786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,399:0,36,255:13,0 chr1 11159787 . G . PASS END=11159885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:14:0,40,468:0,40,255:19,0 chr1 11159886 . C . PASS END=11159888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 11167542 . T . PASS END=11167557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,111,1704:0,111,255:40,0 chr1 11167560 . A . PASS END=11167560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr1 11168232 . A . PASS END=11168232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 11168238 . C . PASS END=11168343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:39:0,106,1665:0,106,255:40,0 chr1 11169347 . C . PASS END=11169427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,99,1528:0,99,255:40,0 chr1 11169437 . A . PASS END=11169437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr1 11169706 . T . PASS END=11169786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:42:0,90,1468:0,90,255:40,1 chr1 11172909 . C . PASS END=11172974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,107,1598:0,107,255:40,0 chr1 11174375 . T . PASS END=11174510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:33:0,90,1324:0,92,255:40,0 chr1 11174870 . C . PASS END=11174944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:60:0,120,1800:0,177,255:40,0 chr1 11175453 . C . PASS END=11175525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:39:0,94,1247:0,94,255:40,0 chr1 11177061 . C . PASS END=11177143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:40:0,81,1368:0,81,255:40,0 chr1 11181303 . C . PASS END=11181425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1174:0,83,255:40,0 chr1 11182033 . T . PASS END=11182033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 11182036 . C . PASS END=11182045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,607:0,48,255:19,0 chr1 11182046 . A . PASS END=11182084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,725:0,63,255:26,0 chr1 11182085 . C . PASS END=11182088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 11182089 . A . PASS END=11182089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 11182090 . G . PASS END=11182137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1025:0,84,255:31,0 chr1 11182138 . G . PASS END=11182161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 11182162 . G . PASS END=11182183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,659:0,41,255:19,0 chr1 11184555 . C . PASS END=11184556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 11184557 . G . PASS END=11184570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,885:0,72,255:25,0 chr1 11184571 . G . PASS END=11184571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 11184572 . A . PASS END=11184572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 11184573 . G . PASS END=11184573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 11184574 . A . PASS END=11184574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,944:0,76,255:30,0 chr1 11184575 . T . PASS END=11184672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1071:0,82,255:39,0 chr1 11184673 . A . PASS END=11184673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:27,0 chr1 11184674 . C . PASS END=11184676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 11184677 . A . PASS END=11184685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:25,0 chr1 11184686 . G . PASS END=11184687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11184688 . T . PASS END=11184690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 11186679 . C . PASS END=11186830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1133:0,89,255:40,0 chr1 11186831 . T . PASS END=11186831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr1 11186832 . A . PASS END=11186835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1163:0,80,255:28,0 chr1 11186836 . C . PASS END=11186843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,68,255:24,0 chr1 11186844 . A . PASS END=11186846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 11186847 . A . PASS END=11186847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:19,0 chr1 11186848 . T . PASS END=11186853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11186856 . G . PASS END=11186856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 11187067 . C . PASS END=11187191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,93,255:40,0 chr1 11187192 . G . PASS END=11187196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:24,0 chr1 11187197 . T . PASS END=11187201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 11187681 . C . PASS END=11187691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:24,0 chr1 11187692 . A . PASS END=11187692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 11187693 . T . PASS END=11187721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,925:0,65,255:26,0 chr1 11187722 . C . PASS END=11187766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1133:0,90,255:36,0 chr1 11187767 . C . PASS END=11187767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 11187768 . G . PASS END=11187805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1217:0,86,255:36,0 chr1 11187806 . G . PASS END=11187840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 11187841 . A . PASS END=11187845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,739:0,50,255:19,0 chr1 11187846 . G . PASS END=11187846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11187847 . A . PASS END=11187847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr1 11187848 . T . PASS END=11187854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:18,0 chr1 11187855 . C . PASS END=11187855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 11187856 . T . PASS END=11187863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr1 11188061 . C . PASS END=11188175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1170:0,83,255:40,0 chr1 11188176 . A . PASS END=11188179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:32:0,78,1170:0,96,255:26,0 chr1 11188180 . G . PASS END=11188180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 11188181 . G . PASS END=11188183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 11188511 . C . PASS END=11188609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,123,255:40,0 chr1 11188912 . C . PASS END=11189004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:33:0,80,1095:0,80,255:40,0 chr1 11189005 . A . PASS END=11189005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:28,0 chr1 11189006 . A . PASS END=11189008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:32:0,85,1180:0,85,255:30,0 chr1 11189795 . C . PASS END=11189795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 11189796 . T . PASS END=11189799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:31,0 chr1 11189800 . T . PASS END=11189800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 11189801 . G . PASS END=11189808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1219:0,86,255:34,0 chr1 11189809 . G . PASS END=11189809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 11189810 . A . PASS END=11189818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1250:0,89,255:36,0 chr1 11189819 . C . PASS END=11189819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr1 11189820 . C . PASS END=11189869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1274:0,94,255:36,0 chr1 11189870 . T . PASS END=11189887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:25:0,60,900:0,71,255:25,0 chr1 11189888 . G . PASS END=11189888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 11189889 . A . PASS END=11189889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 11189890 . C . PASS END=11189895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11190586 . C . PASS END=11190588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11190589 . A . PASS END=11190589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 11190590 . G . PASS END=11190592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11190593 . A . PASS END=11190593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 11190594 . C . PASS END=11190608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr1 11190609 . G . PASS END=11190629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,725:0,63,255:26,0 chr1 11190630 . C . PASS END=11190630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 11190631 . G . PASS END=11190646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr1 11190647 . C . PASS END=11190647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11190648 . T . PASS END=11190655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 11190656 . T . PASS END=11190748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1064:0,82,255:40,0 chr1 11190749 . A . PASS END=11190749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:33,0 chr1 11190750 . G . PASS END=11190787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1147:0,80,255:35,0 chr1 11190788 . T . PASS END=11190815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 11190816 . C . PASS END=11190834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,43,255:19,0 chr1 11193137 . C . PASS END=11193245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:35:0,105,1319:0,105,255:40,0 chr1 11193246 . A . PASS END=11193254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,91,255:25,0 chr1 11194408 . C . PASS END=11194417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 11194418 . G . PASS END=11194418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 11194419 . C . PASS END=11194523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:33:0,96,1213:0,98,255:40,0 chr1 11199361 . C . PASS END=11199370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 11199371 . C . PASS END=11199376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr1 11199377 . C . PASS END=11199381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11199382 . G . PASS END=11199387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 11199388 . C . PASS END=11199390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1031:0,71,255:26,0 chr1 11199391 . G . PASS END=11199442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr1 11199443 . C . PASS END=11199443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1372:0,65,255:37,0 chr1 11199444 . G . PASS END=11199448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,114,1710:0,120,255:39,0 chr1 11199449 . G . PASS END=11199449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:45:41:0,45,1323:0,45,255:36,0 chr1 11199450 . G . PASS END=11199492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1349:0,95,255:38,0 chr1 11199590 . C . PASS END=11199651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:33,0 chr1 11199652 . G . PASS END=11199652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 11199653 . G . PASS END=11199653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 11199654 . C . PASS END=11199654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 11199655 . T . PASS END=11199674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1163:0,80,255:30,0 chr1 11199675 . A . PASS END=11199688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:28:0,71,1008:0,71,255:26,0 chr1 11199689 . C . PASS END=11199690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11199691 . A . PASS END=11199693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:25,0 chr1 11199694 . C . PASS END=11199713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:48:19:0,48,706:0,57,255:19,0 chr1 11199714 . C . PASS END=11199715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 11204705 . C . PASS END=11204733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,104,1352:0,104,255:40,0 chr1 11204734 . T . PASS END=11204734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1465:0,68,255:40,0 chr1 11204735 . G . PASS END=11204812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:43:0,96,1537:0,96,255:40,0 chr1 11204897 . T . PASS END=11204905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1528:0,110,255:40,0 chr1 11205025 . C . PASS END=11205057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,114,1765:0,114,255:40,0 chr1 11205058 . C T, 197.48 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,23,0:0,27,0:147:235,150,0,1915,150,1915:255,150,0:0,0:1.9748e+02,1.4748e+02,0.0000e+00,4.5000e+02,1.8225e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,30:0,0,27,23 chr1 11205059 . G . PASS END=11205095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,102,1530:0,117,255:40,0 chr1 11205096 . C . PASS END=11205102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1309:0,95,255:35,0 chr1 11206733 . C . PASS END=11206739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 11206740 . G . PASS END=11206740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:26,0 chr1 11206741 . C . PASS END=11206741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr1 11206742 . C . PASS END=11206742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:25,0 chr1 11206743 . A . PASS END=11206745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1169:0,80,255:30,0 chr1 11206746 . G . PASS END=11206746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 11206747 . A . PASS END=11206747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 11206748 . G . PASS END=11206748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:33,0 chr1 11206749 . A . PASS END=11206750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 11206751 . G . PASS END=11206751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:34,0 chr1 11206752 . A . PASS END=11206753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:35,0 chr1 11206754 . G . PASS END=11206754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr1 11206755 . T . PASS END=11206755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 11206756 . C . PASS END=11206757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr1 11206758 . T . PASS END=11206758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 11206759 . G . PASS END=11206759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 11206760 . A . PASS END=11206762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 11206763 . C . PASS END=11206763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr1 11206764 . A . PASS END=11206767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:36:0,82,1443:0,82,255:37,0 chr1 11206768 . C . PASS END=11206769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr1 11206770 . A . PASS END=11206770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 11206771 . G . PASS END=11206772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1363:0,62,255:35,0 chr1 11206773 . A . PASS END=11206773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 11206774 . C . PASS END=11206774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:34,0 chr1 11206775 . A . PASS END=11206787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:38:0,82,1443:0,82,255:38,0 chr1 11206788 . G . PASS END=11206791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 11206792 . C . PASS END=11206838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1247:0,81,255:37,0 chr1 11206839 . T . PASS END=11206848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 11210183 . C . PASS END=11210283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:44:0,111,1717:0,111,255:40,0 chr1 11217209 . C . PASS END=11217212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,931:0,78,255:26,0 chr1 11217213 . C . PASS END=11217214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 11217215 . C . PASS END=11217215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 11217216 . C . PASS END=11217319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:31:0,89,1233:0,89,255:40,0 chr1 11217320 . A . PASS END=11217320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:37,0 chr1 11217321 . G . PASS END=11217348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1271:0,89,255:37,0 chr1 11227499 . C . PASS END=11227574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1258:0,91,255:36,0 chr1 11245631 . C . PASS END=11245642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1196:0,80,255:34,0 chr1 11245643 . G . PASS END=11245643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:31,0 chr1 11245644 . A . PASS END=11245644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 11245645 . G . PASS END=11245645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr1 11245646 . T . PASS END=11245652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1233:0,86,255:32,0 chr1 11249637 . A . PASS END=11249645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 11249646 . A . PASS END=11249650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 11249651 . T . PASS END=11249662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,466:0,36,255:13,0 chr1 11249663 . G . PASS END=11249665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 11249666 . C . PASS END=11249668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11249669 . G . PASS END=11249669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 11249670 . C . PASS END=11249671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11249672 . C . PASS END=11249674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11249675 . C . PASS END=11249675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 11249676 . A . PASS END=11249676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11249677 . T . PASS END=11249681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11249682 . A . PASS END=11249692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr1 11249693 . T . PASS END=11249695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 11249696 . C . PASS END=11249710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 11249711 . G . PASS END=11249765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:24,0 chr1 11249766 . A . PASS END=11249767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,703:0,55,255:23,0 chr1 11249768 . C . PASS END=11249778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,892:0,62,255:26,0 chr1 11249779 . A . PASS END=11249783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 11249784 . A . PASS END=11249784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 11249785 . A . PASS END=11249790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11249791 . T . PASS END=11249794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11249795 . G . PASS END=11249795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11249796 . G . PASS END=11249801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,1041:0,73,255:26,0 chr1 11249802 . G . PASS END=11249802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11249803 . T . PASS END=11249803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 11249804 . T . PASS END=11249804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11249805 . G . PASS END=11249805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 11249806 . C . PASS END=11249818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 11249819 . C . PASS END=11249819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 11249820 . C . PASS END=11249840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 11249841 . A . PASS END=11249845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 11249846 . G . PASS END=11249849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 11249850 . A . PASS END=11249856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1063:0,74,255:26,0 chr1 11249857 . G . PASS END=11249879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:31,0 chr1 11249880 . A . PASS END=11249880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 11249881 . T . PASS END=11249994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:36,0 chr1 11249995 . T . PASS END=11250012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,74,255:26,0 chr1 11252327 . A . PASS END=11252427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,111,1584:0,111,255:40,0 chr1 11253637 . G . PASS END=11253668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,651:0,51,255:18,0 chr1 11253669 . C . PASS END=11253671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 11253672 . G . PASS END=11253673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11253674 . C . PASS END=11253692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:23,0 chr1 11253693 . A . PASS END=11253693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:21,0 chr1 11253694 . A . PASS END=11253703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,845:0,69,255:25,0 chr1 11253704 . T . PASS END=11253704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,784:0,23,255:23,0 chr1 11253705 . C . PASS END=11253721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,939:0,67,255:26,0 chr1 11253722 . G . PASS END=11253722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr1 11253723 . G . PASS END=11253728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 11253729 . G . PASS END=11253735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11253736 . C . PASS END=11253811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,814:0,61,255:27,0 chr1 11253812 . G . PASS END=11253812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 11253813 . G . PASS END=11253815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:22,0 chr1 11253816 . G . PASS END=11253831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,54,255:18,0 chr1 11254224 . C . PASS END=11254301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,120,1800:0,123,255:40,0 chr1 11254518 . G . PASS END=11254691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:35:0,87,1288:0,92,255:40,0 chr1 11254692 . G . PASS END=11254703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:35:0,63,945:0,69,255:24,0 chr1 11254704 . C . PASS END=11254716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:40:19:0,40,570:0,40,255:19,0 chr1 11254911 . G . PASS END=11254914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 11254915 . C . PASS END=11254915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1099:0,77,255:29,0 chr1 11254916 . T . PASS END=11255080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:31:0,90,1350:0,93,255:40,0 chr1 11259315 . C . PASS END=11259326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1455:0,104,255:40,0 chr1 11259327 . T . PASS END=11259327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1423:0,76,255:40,0 chr1 11259328 . C . PASS END=11259460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:35:0,90,1350:0,98,255:40,0 chr1 11259598 . C . PASS END=11259755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,99,1485:0,101,255:40,0 chr1 11259756 . G . PASS END=11259756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:31,0 chr1 11259757 . A . PASS END=11259760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1343:0,97,255:34,0 chr1 11264614 . A . PASS END=11264614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11264618 . C . PASS END=11264624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 11264625 . T . PASS END=11264625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 11264626 . C . PASS END=11264640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,869:0,69,255:26,0 chr1 11264641 . T . PASS END=11264720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:33,0 chr1 11264721 . G . PASS END=11264721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 11264722 . C . PASS END=11264728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 11264729 . T . PASS END=11264729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 11264730 . C . PASS END=11264737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 11264738 . A . PASS END=11264741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,909:0,67,255:25,0 chr1 11264742 . T . PASS END=11264760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:18,0 chr1 11264768 . C . PASS END=11264768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 11269369 . C . PASS END=11269474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1180:0,83,255:40,0 chr1 11269475 . T . PASS END=11269503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,976:0,65,255:26,0 chr1 11269504 . A . PASS END=11269505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 11269506 . G . PASS END=11269515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:33:19:0,33,495:0,55,255:13,0 chr1 11270871 . C . PASS END=11270963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,125,255:40,0 chr1 11272369 . C . PASS END=11272372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 11272373 . T . PASS END=11272373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 11272374 . T . PASS END=11272376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 11272377 . C . PASS END=11272378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 11272379 . A . PASS END=11272385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr1 11272386 . A . PASS END=11272386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 11272387 . A . PASS END=11272391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:35,0 chr1 11272392 . G . PASS END=11272392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:34,0 chr1 11272393 . T . PASS END=11272403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:35,0 chr1 11272404 . T . PASS END=11272404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 11272405 . G . PASS END=11272507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,95,255:40,0 chr1 11272508 . C . PASS END=11272516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:32:0,63,945:0,86,255:25,0 chr1 11272517 . G . PASS END=11272526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,58,255:17,0 chr1 11272527 . C . PASS END=11272531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:16:0,30,450:0,34,255:13,0 chr1 11272853 . T . PASS END=11272871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1195:0,91,255:36,0 chr1 11272872 . C . PASS END=11272872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:36,0 chr1 11272873 . T . PASS END=11272965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:87:39:0,87,1398:0,87,255:40,0 chr1 11273456 . C . PASS END=11273456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 11273457 . T . PASS END=11273457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,844:0,59,255:23,0 chr1 11273458 . T . PASS END=11273458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 11273459 . G . PASS END=11273465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1019:0,87,255:31,0 chr1 11273466 . A . PASS END=11273467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr1 11273468 . A . PASS END=11273470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 11273471 . G . PASS END=11273471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:30,0 chr1 11273472 . C . PASS END=11273482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1103:0,93,255:34,0 chr1 11273483 . G . PASS END=11273483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr1 11273484 . T . PASS END=11273622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,1260:0,84,255:40,0 chr1 11273623 . C . PASS END=11273623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11276205 . T . PASS END=11276227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:36:0,91,1199:0,91,255:40,0 chr1 11276228 . C . PASS END=11276228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:40,0 chr1 11276229 . C . PASS END=11276291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,110,1800:0,110,255:40,0 chr1 11288721 . T . PASS END=11288721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 11288725 . T . PASS END=11288757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,900:0,72,255:25,0 chr1 11288758 . G A, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,16,0:0,12,0:81:169,84,0,1070,84,1070:255,84,0:0,0:1.3127e+02,8.1266e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,13:0,0,13,15 chr1 11288759 . T . PASS END=11288759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 11288760 . T . PASS END=11288760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11288761 . A . PASS END=11288761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 11288762 . A . PASS END=11288795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:37,0 chr1 11288796 . C . PASS END=11288809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1485:0,101,255:35,0 chr1 11288810 . A . PASS END=11288810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 11288811 . G . PASS END=11288833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1341:0,95,255:37,0 chr1 11288834 . G . PASS END=11288870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:39:0,88,1418:0,88,255:40,0 chr1 11288871 . G . LowGQ END=11288871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,7:47:0:47:0,0,1205:26,0,255:40,0 chr1 11288872 . G . PASS END=11288872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:64:49:0,64,1563:0,64,255:40,0 chr1 11288873 . T . PASS END=11288908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,99,1502:0,99,255:40,0 chr1 11288909 . G . PASS END=11288959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1327:0,84,255:40,0 chr1 11288960 . C . PASS END=11288975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:26:0,69,1035:0,78,255:25,0 chr1 11290982 . A . PASS END=11291108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:36:0,90,1321:0,95,255:40,0 chr1 11291109 . G . PASS END=11291109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:29,0 chr1 11291110 . G . PASS END=11291111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1350:0,92,255:30,0 chr1 11291357 . C . PASS END=11291482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:36:0,90,1296:0,94,255:40,0 chr1 11291483 . C . PASS END=11291484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:36:0,78,1170:0,108,255:26,0 chr1 11291485 . G . PASS END=11291486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,105,255:27,0 chr1 11291487 . G . PASS END=11291491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:24,0 chr1 11292493 . C . PASS END=11292585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:52:0,120,1800:0,128,255:40,0 chr1 11293452 . T . PASS END=11293452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 11293455 . C . PASS END=11293521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:37:0,81,1305:0,81,255:40,0 chr1 11293522 . T . PASS END=11293522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1068:0,57,255:27,0 chr1 11293523 . C . PASS END=11293527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 11293528 . A . PASS END=11293529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1001:0,76,255:28,0 chr1 11293530 . T . PASS END=11293531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11293532 . T . PASS END=11293532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 11293533 . C . PASS END=11293537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11293538 . T . PASS END=11293538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:28,0 chr1 11293539 . T . PASS END=11293542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 11293543 . G . PASS END=11293543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 11293544 . C . PASS END=11293544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11294200 . C . PASS END=11294213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:26,0 chr1 11294214 . C . PASS END=11294293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:36,0 chr1 11294294 . A . PASS END=11294304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:29:0,60,900:0,71,255:27,0 chr1 11294305 . C . PASS END=11294322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:19:0,57,705:0,57,255:19,0 chr1 11297894 . G . PASS END=11297894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 11297900 . C . PASS END=11297903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,521:0,48,255:17,0 chr1 11297904 . A . PASS END=11297904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 11297905 . T . PASS END=11297924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,607:0,54,255:19,0 chr1 11297925 . G . PASS END=11297964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,734:0,63,255:26,0 chr1 11297965 . C . PASS END=11297966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 11297967 . G . PASS END=11297978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:22,0 chr1 11297979 . A . PASS END=11297979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11297980 . G . PASS END=11297986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11297987 . G . PASS END=11297989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 11297990 . C . PASS END=11298044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:23,0 chr1 11298045 . G . PASS END=11298045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 11298046 . C . PASS END=11298073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,62,255:23,0 chr1 11298074 . G . PASS END=11298087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 11298088 . A . PASS END=11298088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:15,0 chr1 11298089 . G . PASS END=11298095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 11298096 . A . PASS END=11298104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 11298105 . T . PASS END=11298105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 11298459 . C . PASS END=11298468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:26,0 chr1 11298469 . T . PASS END=11298469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 11298470 . A . PASS END=11298470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 11298471 . T . PASS END=11298473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 11298474 . C . PASS END=11298475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 11298476 . A . PASS END=11298497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:29,0 chr1 11298498 . C . PASS END=11298498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 11298499 . A . PASS END=11298503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11298504 . C . PASS END=11298507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 11298508 . C . PASS END=11298557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1172:0,83,255:33,0 chr1 11298558 . G . PASS END=11298561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:26,0 chr1 11298562 . G . PASS END=11298563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11298564 . A . PASS END=11298608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr1 11298609 . T . PASS END=11298638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,675:0,41,255:19,0 chr1 11298639 . C . PASS END=11298674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 11300360 . C . PASS END=11300365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11300366 . A . PASS END=11300366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11300367 . T . PASS END=11300367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 11300368 . T . PASS END=11300392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:16,0 chr1 11300393 . C . PASS END=11300394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,504:0,31,255:13,0 chr1 11300395 . A . PASS END=11300396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11300397 . A . PASS END=11300397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:13,0 chr1 11300398 . G . PASS END=11300402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11300403 . G . PASS END=11300407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11300408 . C . PASS END=11300409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11300410 . A . PASS END=11300410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 11300411 . C . PASS END=11300412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11300413 . T . PASS END=11300425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 11300426 . G . PASS END=11300430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 11300431 . G . PASS END=11300437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 11300438 . G . PASS END=11300461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,776:0,66,255:26,0 chr1 11300462 . C . PASS END=11300468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 11300469 . C . PASS END=11300472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 11300473 . G . PASS END=11300477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 11300478 . G . PASS END=11300478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 11300479 . C . PASS END=11300491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 11300492 . G . PASS END=11300494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,77,255:26,0 chr1 11300495 . G . PASS END=11300544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1063:0,84,255:34,0 chr1 11300545 . T . PASS END=11300567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:24:0,68,1022:0,68,255:26,0 chr1 11300568 . A . PASS END=11300568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 11300569 . C . PASS END=11300576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 11300577 . G . PASS END=11300599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:18:0,47,720:0,47,255:19,0 chr1 11300600 . C . PASS END=11300604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 11301610 . C . PASS END=11301620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 11301621 . T . PASS END=11301645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:19,0 chr1 11301646 . T . PASS END=11301676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:26,0 chr1 11301677 . C . PASS END=11301713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 11301714 . A G, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,10,0:0,15,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,15:0,0,13,12 chr1 11301715 . T . PASS END=11301728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 11301729 . C . PASS END=11301729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 11301730 . T . PASS END=11301736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 11301737 . T . PASS END=11301739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 11303171 . T . PASS END=11303312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:30:0,87,1101:0,87,255:40,0 chr1 11303313 . C . PASS END=11303323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,990:0,99,255:25,0 chr1 11303324 . A . PASS END=11303341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:19,0 chr1 11303342 . T . PASS END=11303342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:13,0 chr1 11303343 . G . PASS END=11303348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:14,0 chr1 11303349 . A . PASS END=11303357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 11307682 . C . PASS END=11307683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 11307684 . G . PASS END=11307688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1009:0,81,255:29,0 chr1 11307689 . G . PASS END=11307689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 11307690 . G . PASS END=11307692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1074:0,87,255:31,0 chr1 11307693 . G . PASS END=11307693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 11307694 . A . PASS END=11307703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1135:0,83,255:34,0 chr1 11307704 . T . PASS END=11307707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:66:35:0,66,1241:0,66,255:38,0 chr1 11307708 . G . PASS END=11307790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:40:0,96,1440:0,113,255:40,0 chr1 11307876 . C . PASS END=11307878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11307879 . A . PASS END=11307882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11307883 . A . PASS END=11307883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 11307884 . A . PASS END=11307890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 11307891 . C . PASS END=11307896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11307897 . C . PASS END=11307899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11307900 . G . PASS END=11307903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,662:0,24,255:20,0 chr1 11307904 . C . PASS END=11307923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 11307924 . C . PASS END=11307926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 11307927 . G . PASS END=11307927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 11307928 . G . PASS END=11307939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 11307940 . G . PASS END=11307958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 11307959 . A . PASS END=11307959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 11307960 . T . PASS END=11307964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 11307965 . T . PASS END=11307965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 11307966 . G . PASS END=11307971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 11307972 . T . PASS END=11307972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 11307973 . T . PASS END=11307973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 11307974 . G . PASS END=11307974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 11307975 . G . PASS END=11307975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 11307976 . T . PASS END=11307978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 11307979 . G . PASS END=11307998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 11307999 . C . PASS END=11307999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 11308000 . A . PASS END=11308007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 11308008 . A . PASS END=11308008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 11308009 . T . PASS END=11308009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,785:0,72,255:24,0 chr1 11308010 . T . PASS END=11308011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 11308012 . G . PASS END=11308019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr1 11308020 . G . PASS END=11308029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11308030 . G . PASS END=11308030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 11308031 . C . PASS END=11308037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 11308038 . A . PASS END=11308038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 11308039 . C . PASS END=11308039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 11308040 . T . PASS END=11308040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 11308041 . G . PASS END=11308043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11308044 . G . PASS END=11308054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 11308055 . T . PASS END=11308061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:28,0 chr1 11308062 . A . PASS END=11308062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 11308063 . G . PASS END=11308069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 11308070 . T . PASS END=11308070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 11308071 . T . PASS END=11308078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr1 11308079 . C . PASS END=11308089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:27,0 chr1 11308090 . T . PASS END=11308090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:25,0 chr1 11308091 . T . PASS END=11308092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 11308093 . C . PASS END=11308093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11308094 . A . PASS END=11308105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:24,0 chr1 11308106 . G . PASS END=11308106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 11308107 . T . PASS END=11308108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11308109 . C . PASS END=11308109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 11308110 . C . PASS END=11308114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 11308115 . G . PASS END=11308115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 11308116 . C . PASS END=11308118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11308119 . C . PASS END=11308151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,601:0,44,255:19,0 chr1 11313896 . C . PASS END=11314030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:35:0,105,1268:0,105,255:40,0 chr1 11314039 . A . PASS END=11314039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:42:0,87,1305:0,126,255:29,0 chr1 11316049 . C . PASS END=11316049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11316050 . C . PASS END=11316100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1241:0,89,255:37,0 chr1 11316101 . A . PASS END=11316101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr1 11316102 . T . PASS END=11316148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:34,0 chr1 11316149 . T . PASS END=11316149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 11316150 . T . PASS END=11316151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11316152 . G . PASS END=11316153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 11316154 . G . PASS END=11316154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11316155 . T . PASS END=11316167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:25:0,75,909:0,75,255:25,0 chr1 11316168 . C . PASS END=11316175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 11316176 . T . PASS END=11316220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 11316221 . C . PASS END=11316221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 11316222 . T . PASS END=11316224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 11316225 . T . PASS END=11316225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:18,0 chr1 11316226 . G . PASS END=11316228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 11316229 . C . PASS END=11316249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,637:0,40,255:19,0 chr1 11316251 . T . PASS END=11316251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11316990 . A . PASS END=11316992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 11316993 . T . PASS END=11316993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 11316994 . G . PASS END=11317018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1075:0,93,255:32,0 chr1 11317019 . C . PASS END=11317019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 11317020 . A . PASS END=11317178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,954:0,82,255:37,0 chr1 11317179 . G . PASS END=11317179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 11317180 . C . PASS END=11317182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 11317183 . A . PASS END=11317183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:28,0 chr1 11317184 . T . PASS END=11317184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 11317185 . T . PASS END=11317185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:29,0 chr1 11317186 . C . PASS END=11317189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 11317190 . T . PASS END=11317190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:30,0 chr1 11317191 . G . PASS END=11317202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1202:0,93,255:31,0 chr1 11317203 . T . PASS END=11317203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:25,0 chr1 11317204 . T . PASS END=11317205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11317206 . C . PASS END=11317222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr1 11318542 . C . PASS END=11318650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:32:0,90,1350:0,96,255:40,0 chr1 11319305 . C . PASS END=11319305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11319306 . T . PASS END=11319318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 11319319 . T . PASS END=11319319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 11319320 . G . PASS END=11319320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 11319321 . G . PASS END=11319329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1119:0,82,255:36,0 chr1 11319330 . T . PASS END=11319330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr1 11319331 . G . PASS END=11319341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1311:0,108,255:37,0 chr1 11319342 . T . PASS END=11319342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1141:0,61,255:34,0 chr1 11319343 . T . PASS END=11319452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:36:0,84,1250:0,85,255:40,0 chr1 11319453 . C . PASS END=11319455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:36:0,78,1170:0,108,255:26,0 chr1 11319456 . G . PASS END=11319461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:28,0 chr1 11319462 . A . PASS END=11319465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 11319466 . T . PASS END=11319466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,887:0,57,255:23,0 chr1 11333252 . C . PASS END=11333252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 11333278 . C . PASS END=11333278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 11333279 . C . LowGQ END=11333279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,147:21,0,168:5,0 chr1 11333485 . G . PASS END=11333485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11333503 . G . PASS END=11333503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11333511 . G . PASS END=11333511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 11333585 . T . PASS END=11333585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr1 11333589 . A . PASS END=11333594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,823:0,69,255:23,0 chr1 11333595 . G . PASS END=11333642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,630:0,40,255:18,0 chr1 11333643 . G . PASS END=11333643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 11333644 . T . PASS END=11333646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 11333647 . A . PASS END=11333649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 11333650 . C . PASS END=11333650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 11333651 . T . PASS END=11333655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 11333656 . A . PASS END=11333656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 11333657 . C . PASS END=11333698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 11333699 . C . PASS END=11333711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 11333712 . T . PASS END=11333727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 11333728 . C . PASS END=11333730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 11333731 . C . PASS END=11333731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 11333732 . C . PASS END=11333738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:16,0 chr1 11333739 . T . PASS END=11333740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 11333741 . G . PASS END=11333763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr1 11333764 . G . PASS END=11333765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 11333766 . G . PASS END=11333788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,43,255:19,0 chr1 11333789 . G . PASS END=11333841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,742:0,60,255:25,0 chr1 11333842 . T . PASS END=11333842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 11333843 . G . PASS END=11333858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,840:0,69,255:24,0 chr1 11333859 . G . PASS END=11333859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr1 11333860 . T . PASS END=11333861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 11333862 . C . PASS END=11333862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 11333863 . T . PASS END=11333867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr1 11333868 . G . PASS END=11333868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 11333869 . T . PASS END=11333879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:25,0 chr1 11333880 . G . PASS END=11333880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 11333881 . G . PASS END=11333881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11333882 . T . PASS END=11333885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 11333886 . T . PASS END=11333887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 11333888 . G . PASS END=11333898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 11333899 . A . PASS END=11333900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 11333901 . T . PASS END=11333941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1026:0,80,255:31,0 chr1 11333942 . C . PASS END=11333942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:31,0 chr1 11333943 . A . PASS END=11333956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:34,0 chr1 11333957 . C . PASS END=11333957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 11333958 . C . PASS END=11334076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:33:0,83,1180:0,83,255:40,0 chr1 11334077 . C . PASS END=11334108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,73,255:26,0 chr1 11334109 . A . PASS END=11334109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 11334110 . C . PASS END=11334113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 11334114 . G . PASS END=11334114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 11334115 . G . PASS END=11334117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 11345701 . G . PASS END=11346188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1141:0,80,255:40,0 chr1 11346282 . G . PASS END=11346282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,111,1665:0,141,255:37,0 chr1 11346358 . T . PASS END=11346358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 11346406 . C . PASS END=11346406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 11346422 . C . PASS END=11346422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,111,1665:0,138,255:37,0 chr1 11346427 . G . PASS END=11346427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1395:0,126,255:31,0 chr1 11346435 . T . PASS END=11346435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:41:0,93,1395:0,123,255:31,0 chr1 11346483 . G . PASS END=11346483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 11346652 . C . PASS END=11346652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 11346707 . G . PASS END=11346707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 11346719 . C . PASS END=11346719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 11346800 . T . PASS END=11346800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 11346807 . A . LowGQ END=11346807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,657:16,0,255:20,0 chr1 11346863 . A . PASS END=11346863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 11346897 . C . PASS END=11346897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:30,0 chr1 11347035 . A . PASS END=11347035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 11347178 . T . PASS END=11347178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11347185 . C . PASS END=11347185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11347198 . C . PASS END=11347198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11347355 . C . PASS END=11347355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 11347377 . A . PASS END=11347377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1483:0,102,255:40,0 chr1 11347416 . A . PASS END=11347416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 11347453 . T . PASS END=11347453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 11347614 . C . PASS END=11347615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:23,0 chr1 11347647 . T . PASS END=11347647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 11347682 . A . PASS END=11347683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 11347694 . T . PASS END=11347694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 11347723 . A . PASS END=11347723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 11348064 . G . PASS END=11348064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 11348279 . G . PASS END=11348279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 11348303 . C . PASS END=11348303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 11348375 . G . PASS END=11348375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 11348389 . C . PASS END=11348389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 11348401 . C . PASS END=11348401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 11354930 . T . PASS END=11354947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 11561050 . A . PASS END=11561053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr1 11561054 . A . PASS END=11561054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 11561055 . C . PASS END=11561191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1188:0,93,255:40,0 chr1 11561192 . A . PASS END=11561195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 11561196 . G . PASS END=11561198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:24,1 chr1 11561199 . C . PASS END=11561233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,963:0,78,255:26,0 chr1 11561234 . G . PASS END=11561234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 11561235 . T . PASS END=11561235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 11561236 . A . PASS END=11561236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:22,0 chr1 11561237 . C . PASS END=11561238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:23,0 chr1 11561239 . C . PASS END=11561239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 11561240 . T . PASS END=11561250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:24,0 chr1 11561251 . T . PASS END=11561251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 11561252 . T . PASS END=11561266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,969:0,65,255:24,0 chr1 11561267 . G . PASS END=11561282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 11561283 . C . PASS END=11561283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 11561284 . T . PASS END=11561287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 11561288 . T . PASS END=11561288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr1 11561289 . G . PASS END=11561291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 11561292 . C . PASS END=11561296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:27,0 chr1 11561297 . G . PASS END=11561303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 11561304 . C . PASS END=11561304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 11561305 . A . PASS END=11561306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11561307 . G . PASS END=11561307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 11561308 . G . PASS END=11561311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 11561312 . T . PASS END=11561343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,984:0,65,255:26,0 chr1 11561344 . C . PASS END=11561344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 11561345 . T . PASS END=11561347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 11561348 . A . PASS END=11561348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 11561349 . C . PASS END=11561359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,925:0,62,255:26,0 chr1 11561360 . C . PASS END=11561365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11561366 . A . PASS END=11561366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 11561367 . C . PASS END=11561374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 11561375 . A . PASS END=11561405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 11561406 . C . PASS END=11561416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,720:0,75,255:19,0 chr1 11561417 . C . PASS END=11561433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 11561434 . C . PASS END=11561435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 11561436 . G . PASS END=11561436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11561437 . T . PASS END=11561437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,585:0,32,255:19,0 chr1 11561438 . T . PASS END=11561477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:22,0 chr1 11561478 . C . PASS END=11561523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,630:0,41,255:19,0 chr1 11561524 . C . PASS END=11561544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr1 11561545 . C . PASS END=11561545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 11561546 . G . PASS END=11561553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 11561554 . T . PASS END=11561554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 11561555 . C . PASS END=11561555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 11561556 . C . PASS END=11561558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 11561559 . A . PASS END=11561559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 11561560 . G . PASS END=11561561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 11561562 . C . PASS END=11561562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11561563 . C . PASS END=11561563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 11561564 . C . PASS END=11561569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11561570 . T . PASS END=11561570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr1 11561571 . C . PASS END=11561583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 11561584 . T . PASS END=11561588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 11561589 . C . PASS END=11561591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 11561592 . T . PASS END=11561592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 11561593 . G A, 80.11 PASS DP=11;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,6,0:0,5,0:30:118,33,0,426,33,426:255,33,0:0,0:8.0111e+01,3.0111e+01,4.2365e-03,4.2338e+02,6.4881e+01,4.2639e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,7:0,0,7,4 chr1 11561594 . G . PASS END=11561595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11561596 . C . PASS END=11561598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 11561599 . G . PASS END=11561600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 11561601 . C . PASS END=11561608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 11561609 . G . PASS END=11561609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 11561610 . G . PASS END=11561619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr1 11561620 . G . PASS END=11561620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 11561621 . C . PASS END=11561625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 11561626 . C . PASS END=11561628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 11561629 . A . PASS END=11561630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11561631 . G . PASS END=11561650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,684:0,44,255:19,0 chr1 11561651 . G . PASS END=11561657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 11561658 . T . PASS END=11561667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 11561668 . A . PASS END=11561668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:18,0 chr1 11561669 . C . PASS END=11561698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,631:0,40,255:19,0 chr1 11561699 . A . PASS END=11561699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 11561700 . G . PASS END=11561715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:17,0 chr1 11561716 . A . PASS END=11561716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 11561717 . A . PASS END=11561725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 11561726 . T . PASS END=11561726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr1 11561727 . G . PASS END=11561733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 11561734 . A . PASS END=11561734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 11561735 . A . PASS END=11561752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 11561753 . G . PASS END=11561754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 11561755 . A . PASS END=11561756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 11561757 . C . PASS END=11561758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 11561759 . C . PASS END=11561760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11561761 . C . PASS END=11561761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 11561762 . C . PASS END=11561762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11561763 . C . PASS END=11561763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 11561764 . C . PASS END=11561766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 11561767 . G . PASS END=11561767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 11561768 . C . PASS END=11561778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 11561779 . G . PASS END=11561779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:9,0 chr1 11561780 . C . PASS END=11561793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 11561794 . G . PASS END=11561794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 11561795 . C . PASS END=11561808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 11561809 . T . PASS END=11561815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 11561816 . G . PASS END=11561816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 11561817 . G . PASS END=11561835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 11561836 . G . PASS END=11561836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 11561837 . T . PASS END=11561839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,309:0,27,255:9,0 chr1 11561840 . G . PASS END=11561840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:9,0 chr1 11561841 . T . PASS END=11561847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11561848 . A . PASS END=11561848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 11561849 . C . PASS END=11561857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 11561858 . A . PASS END=11561868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:11:0,20,360:0,20,255:9,0 chr1 11561869 . C . PASS END=11561876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11561877 . G . PASS END=11561877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 11561878 . C . LowGQ END=11561878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,225:3,0,228:8,0 chr1 11561879 . T . PASS END=11561879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 11561880 . C . PASS END=11561884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 11561885 . T . PASS END=11561885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 11561886 . C . PASS END=11561891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 11561892 . G . PASS END=11561898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 11561899 . G . PASS END=11561899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 11561900 . A . PASS END=11561901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 11561902 . G . PASS END=11561902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 11561903 . C . PASS END=11561910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 11561911 . A . LowGQ END=11561911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 11561912 . A . PASS END=11561915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 11561916 . T . PASS END=11561984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 11561985 . G . PASS END=11561985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:9,0 chr1 11561986 . G . PASS END=11562038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,380:0,33,255:13,0 chr1 11562039 . C . PASS END=11562040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11562041 . C . PASS END=11562053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 11562054 . C . PASS END=11562054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 11562055 . C . PASS END=11562057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11562058 . A . PASS END=11562058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:13,0 chr1 11562059 . G . PASS END=11562112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,511:0,45,255:19,0 chr1 11562113 . A . PASS END=11562115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 11562116 . G . PASS END=11562118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 11562119 . T . PASS END=11562122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 11562123 . C . PASS END=11562123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:12,0 chr1 11562124 . C . PASS END=11562145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 11562735 . G . PASS END=11562737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 11562738 . C . PASS END=11562738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 11562739 . C . PASS END=11562747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 11562748 . G . PASS END=11562925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,1103:0,80,255:40,0 chr1 11562926 . G . PASS END=11562951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 11562952 . C . PASS END=11562954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 11574447 . C . PASS END=11574492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,107,1201:0,107,255:40,0 chr1 11574493 . G . PASS END=11574493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:74:56:0,74,1872:0,74,255:40,0 chr1 11574494 . T . PASS END=11574556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:40:0,93,1395:0,120,255:40,0 chr1 11574557 . T . PASS END=11574557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:29,0 chr1 11574558 . G . PASS END=11574572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:30,0 chr1 11574573 . C . PASS END=11574583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1047:0,71,255:26,0 chr1 11575426 . T . PASS END=11575426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11575427 . G . PASS END=11575465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:31,0 chr1 11575466 . C . PASS END=11575469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 11575470 . C . PASS END=11575479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 11575480 . T . PASS END=11575480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:24,0 chr1 11575481 . C . PASS END=11575484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 11575485 . C . PASS END=11575485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 11575486 . T . PASS END=11575486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:24,0 chr1 11575487 . G . PASS END=11575491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:28,0 chr1 11575492 . A . PASS END=11575492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr1 11575493 . C . PASS END=11575494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 11575495 . T . PASS END=11575495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 11575496 . G . PASS END=11575497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 11575498 . T . PASS END=11575498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:25,0 chr1 11575499 . C . PASS END=11575502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11575503 . G . PASS END=11575518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:28:0,71,1003:0,71,255:26,0 chr1 11575519 . G . PASS END=11575519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:25,0 chr1 11575520 . C . PASS END=11575522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 11575523 . C . PASS END=11575528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 11575529 . T . PASS END=11575530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11575531 . G . PASS END=11575536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 11575537 . C . PASS END=11575560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,68,255:25,0 chr1 11576058 . G . PASS END=11576067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:28,0 chr1 11576068 . T . PASS END=11576068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 11576069 . G . PASS END=11576218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1070:0,90,255:40,0 chr1 11577520 . A . PASS END=11577545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,653:0,44,255:19,0 chr1 11577546 . G . PASS END=11577587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,754:0,63,255:24,0 chr1 11577588 . T . PASS END=11577588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:19,0 chr1 11577589 . G . PASS END=11577602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 11577603 . A . PASS END=11577626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,582:0,48,255:19,0 chr1 11577627 . C . PASS END=11577627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 11577628 . C . PASS END=11577645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 11577646 . T . PASS END=11577646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:13,0 chr1 11577647 . C . PASS END=11577656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 11577657 . C . PASS END=11577659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 11579412 . C . PASS END=11579432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1119:0,93,255:33,0 chr1 11579433 . G . PASS END=11579469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:33:0,85,1077:0,85,255:40,0 chr1 11579470 . G A, 44.96 PASS DP=40;MQ=249.16;MQRankSum=5.147;ReadPosRankSum=4.069;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,14,0:0.350,0.000:40:18,7,0:8,7,0:44:80,0,47,180,180,180:255,0,255:26,0:4.4957e+01,1.8224e-04,5.0000e+01,1.7973e+02,2.1450e+02,1.8274e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,13,9,5:15,11,10,4 chr1 11579471 . C . PASS END=11579507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:41:0,93,1510:0,93,255:40,0 chr1 11579508 . C . PASS END=11579539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1125:0,80,255:32,0 chr1 11579540 . T . PASS END=11579560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 11579776 . T . PASS END=11579800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,779:0,66,255:25,0 chr1 11579801 . C . PASS END=11579802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 11579803 . T . PASS END=11579804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr1 11579805 . G . PASS END=11579805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 11579806 . T . PASS END=11579815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr1 11579816 . C . PASS END=11579838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 11579839 . C . PASS END=11579839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 11579840 . C . PASS END=11579864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1141:0,87,255:34,0 chr1 11579865 . A . PASS END=11579865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:16:33:0,16,868:0,16,255:23,0 chr1 11579866 . T . PASS END=11579868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 11579869 . T . PASS END=11579869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 11579870 . G . PASS END=11579870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11579871 . C . PASS END=11579873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11579874 . C . PASS END=11579882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11579883 . C . PASS END=11579915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 11579916 . A . PASS END=11579916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 11579917 . A . PASS END=11579936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 11579937 . G . PASS END=11579937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11580744 . G . PASS END=11580746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,764:0,63,255:22,0 chr1 11580747 . T . PASS END=11580747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 11580748 . G . PASS END=11580752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:23,0 chr1 11580753 . T . PASS END=11580753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 11580754 . C . PASS END=11580760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,817:0,69,255:23,0 chr1 11580761 . C . PASS END=11580762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 11580763 . C . PASS END=11580775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 11580776 . G . PASS END=11580776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11580777 . T . PASS END=11580792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11580793 . C . PASS END=11580806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:28,0 chr1 11580807 . G . PASS END=11580807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 11580808 . G . PASS END=11580813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 11580814 . G . PASS END=11580819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11580820 . C . PASS END=11580820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 11580821 . T . PASS END=11580821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 11580822 . T . PASS END=11580833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1045:0,84,255:28,0 chr1 11580834 . C . PASS END=11580834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 11580835 . C . PASS END=11580835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11580836 . A . PASS END=11580857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,69,255:26,0 chr1 11580858 . T . PASS END=11580880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:16:0,48,576:0,48,255:16,0 chr1 11580881 . G . PASS END=11580895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:11,0 chr1 11580896 . A . LowGQ END=11580896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 11580897 . C . PASS END=11580902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 11580903 . C . PASS END=11580905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 11582345 . G . PASS END=11582355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:31,0 chr1 11583999 . G . PASS END=11584012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1155:0,87,255:31,0 chr1 11584013 . A . PASS END=11584013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 11584014 . A . PASS END=11584054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1202:0,86,255:36,0 chr1 11584055 . A . PASS END=11584055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1203:0,74,255:33,0 chr1 11584056 . A . PASS END=11584069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:34,0 chr1 11584070 . T . PASS END=11584070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1119:0,47,255:28,0 chr1 11584071 . C . PASS END=11584075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:29,0 chr1 11584076 . G . PASS END=11584092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,74,255:26,0 chr1 11584093 . G . PASS END=11584110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,44,255:19,0 chr1 11584111 . G . PASS END=11584112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:17:0,36,540:0,51,255:12,0 chr1 11585233 . A . PASS END=11585233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 11585234 . T . PASS END=11585234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:15,0 chr1 11585235 . T . PASS END=11585244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr1 11585245 . C . PASS END=11585268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,745:0,60,255:26,0 chr1 11585269 . G . PASS END=11585291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,86,255:33,0 chr1 11585292 . A . PASS END=11585292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:32,0 chr1 11585293 . G . PASS END=11585304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1130:0,83,255:32,0 chr1 11585305 . A . PASS END=11585315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:29:0,72,1080:0,87,255:26,0 chr1 11585316 . C . PASS END=11585317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 11585318 . T . PASS END=11585342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,925:0,67,255:25,0 chr1 11585343 . G . PASS END=11585343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 11585344 . G . PASS END=11585363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 11585364 . T . PASS END=11585364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 11585365 . T . PASS END=11585365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11585366 . C . PASS END=11585366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 11585367 . C . PASS END=11585369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11586708 . G . PASS END=11586820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1194:0,83,255:38,0 chr1 11586821 . C . PASS END=11586845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr1 11586846 . T . PASS END=11586846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:21,0 chr1 11586847 . T . PASS END=11586872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 11586873 . A . PASS END=11586888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:19,0 chr1 11586889 . C . PASS END=11586892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:13,0 chr1 11588029 . G . PASS END=11588030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 11588031 . G . PASS END=11588034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:30,0 chr1 11588035 . A . PASS END=11588035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr1 11588036 . C . PASS END=11588042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 11588043 . C . PASS END=11588043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 11588044 . C . PASS END=11588125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1147:0,80,255:39,0 chr1 11589613 . G . PASS END=11589613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 11589614 . A . PASS END=11589620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 11589621 . A . PASS END=11589621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 11589622 . C . PASS END=11589646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:19,0 chr1 11589647 . T . PASS END=11589689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr1 11589690 . G . PASS END=11589724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:35,0 chr1 11589725 . T . PASS END=11589725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr1 11589726 . T . PASS END=11589743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:35,0 chr1 11589824 . C . PASS END=11589960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:37:0,96,1235:0,96,255:40,0 chr1 11589961 . G . PASS END=11589961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr1 11589962 . C . PASS END=11589981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,85,255:34,0 chr1 11589982 . C . PASS END=11590011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,939:0,75,255:26,0 chr1 11590012 . A . PASS END=11590012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 11590013 . C . PASS END=11590013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 11590014 . C . PASS END=11590016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 11590964 . G . PASS END=11591090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:30:0,90,1088:0,90,255:40,0 chr1 11591622 . G . PASS END=11591632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11591633 . T . PASS END=11591633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 11591634 . C . PASS END=11591669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 11591670 . A . PASS END=11591670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 11591671 . G . PASS END=11591678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr1 11591679 . A . PASS END=11591686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 11591687 . C . PASS END=11591687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 11591688 . T . PASS END=11591701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:18,0 chr1 11591702 . C . PASS END=11591708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 11591709 . A . PASS END=11591710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11591711 . G . PASS END=11591714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 11591715 . C . PASS END=11591715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 11591716 . A . PASS END=11591739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,861:0,66,255:24,0 chr1 11591740 . G . PASS END=11591740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 11591741 . C . PASS END=11591753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 11591754 . T . PASS END=11591767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,706:0,57,255:19,0 chr1 11593851 . A . PASS END=11593884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,169,255:40,0 chr1 11594438 . A . PASS END=11594456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,662:0,44,255:19,0 chr1 11594457 . C . PASS END=11594457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:16,0 chr1 11594458 . C . PASS END=11594480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 11594481 . A . PASS END=11594485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 11594486 . C . PASS END=11594486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 11594487 . G . PASS END=11594492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11594493 . A . PASS END=11594493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:19,0 chr1 11594494 . G . PASS END=11594494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11594495 . A . PASS END=11594495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:19,0 chr1 11594496 . G . PASS END=11594496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11594497 . C . PASS END=11594498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 11594499 . T . PASS END=11594504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11594505 . A . PASS END=11594522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:18:0,41,630:0,41,255:19,0 chr1 11594523 . T . PASS END=11594523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 11594524 . G . PASS END=11594530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr1 11594531 . G . PASS END=11594531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 11594532 . G . PASS END=11594535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 11594536 . A . PASS END=11594536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:12,0 chr1 11594537 . G . PASS END=11594539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 11594540 . C . PASS END=11594540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:12,0 chr1 11594541 . T . PASS END=11594544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 11594545 . C . PASS END=11594545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 11594546 . C . PASS END=11594546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 11594547 . G . PASS END=11594552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 11594553 . T . PASS END=11594553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 11594554 . C . PASS END=11594567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:17,0 chr1 11594568 . A . PASS END=11594568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 11594569 . C . PASS END=11594573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 11594574 . A . PASS END=11594574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 11594575 . G . PASS END=11594578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 11594579 . A . PASS END=11594579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:14,0 chr1 11594580 . T . PASS END=11594588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 11594589 . A . PASS END=11594590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 11594591 . A . PASS END=11594597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 11595068 . G . PASS END=11595073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,914:0,72,255:26,0 chr1 11595074 . A . PASS END=11595111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,972:0,81,255:35,0 chr1 11595112 . T . PASS END=11595112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:34,0 chr1 11595113 . G . PASS END=11595135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:35,0 chr1 11595136 . A . PASS END=11595153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:26,0 chr1 11595154 . C . PASS END=11595154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 11595155 . T . PASS END=11595155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 11595156 . G . PASS END=11595156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 11595157 . C . PASS END=11595165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 11595166 . C . PASS END=11595177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr1 11595178 . T . PASS END=11595181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 11595535 . G . PASS END=11595536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11595537 . A . PASS END=11595537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 11595538 . T . PASS END=11595548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:25,0 chr1 11595549 . G . PASS END=11595549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 11595550 . T . PASS END=11595550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 11595551 . G . PASS END=11595622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:29:0,83,1094:0,83,255:40,0 chr1 11595623 . C . PASS END=11595623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1498:0,55,255:40,0 chr1 11595624 . T . PASS END=11595699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1191:0,83,255:40,0 chr1 11595700 . A . PASS END=11595701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:32:0,63,945:0,96,255:26,0 chr1 11596381 . G . PASS END=11596381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11596382 . A . PASS END=11596382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 11596383 . C . PASS END=11596397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,939:0,72,255:26,0 chr1 11596398 . C . PASS END=11596408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr1 11596409 . C . PASS END=11596409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 11596410 . G . PASS END=11596434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1172:0,83,255:37,0 chr1 11596435 . G . PASS END=11596435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 11596436 . T . PASS END=11596541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:36:0,96,1413:0,108,255:40,0 chr1 11596542 . G . PASS END=11596542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 11596543 . G . PASS END=11596552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:35,0 chr1 11596553 . T . PASS END=11596556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,95,255:26,0 chr1 11596557 . C . PASS END=11596567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1011:0,84,255:28,0 chr1 11596568 . C . PASS END=11596568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 11596569 . C . PASS END=11596570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 11596571 . T . PASS END=11596613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,63,255:26,0 chr1 11596614 . T . PASS END=11596614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11596615 . C . PASS END=11596616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11596617 . G . PASS END=11596673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,582:0,44,255:19,0 chr1 11596674 . G . PASS END=11596695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 11596696 . C . PASS END=11596717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:11:0,20,360:0,20,255:9,0 chr1 11596718 . C . PASS END=11596720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11596721 . T . PASS END=11596721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 11596722 . G . PASS END=11596731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 11596732 . G . PASS END=11596732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 11596733 . C . PASS END=11596734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 11596735 . T . LowGQ END=11596735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:6,0 chr1 11596736 . C . PASS END=11596737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 11596738 . C . LowGQ END=11596739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,227:12,0,239:6,0 chr1 11596740 . A . PASS END=11596743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 11708751 . T . PASS END=11708752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11708753 . A . PASS END=11708753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 11708754 . G . PASS END=11708773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1128:0,86,255:36,0 chr1 11708774 . T . PASS END=11708852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1169:0,80,255:40,1 chr1 11708853 . G . PASS END=11708853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 11708854 . C . PASS END=11708869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1156:0,93,255:31,0 chr1 11708870 . T . PASS END=11708870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 11708871 . G . PASS END=11708871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:25,0 chr1 11708872 . A . PASS END=11708885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,930:0,78,255:26,0 chr1 11709144 . C . PASS END=11709147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11709148 . A . PASS END=11709148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr1 11709149 . T . PASS END=11709156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 11709157 . C . PASS END=11709157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 11709158 . C . PASS END=11709163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,829:0,66,255:22,0 chr1 11709164 . C . PASS END=11709164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 11709165 . A . PASS END=11709167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11709168 . G . PASS END=11709245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1135:0,80,255:34,0 chr1 11709246 . C . PASS END=11709246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 11709247 . T . PASS END=11709248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 11709249 . G . PASS END=11709249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:25,0 chr1 11709250 . T . PASS END=11709254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 11709255 . G . PASS END=11709267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 11709268 . C . PASS END=11709268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 11709269 . T . PASS END=11709269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11709270 . G . PASS END=11709282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 11709836 . C . PASS END=11709847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1103:0,90,255:33,0 chr1 11709848 . A . PASS END=11709848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr1 11709849 . C . PASS END=11709880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1186:0,83,255:35,0 chr1 11709881 . T . PASS END=11709882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1132:0,72,255:31,0 chr1 11709883 . C . PASS END=11709887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1144:0,88,255:33,0 chr1 11709888 . A . PASS END=11709888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,988:0,52,255:26,0 chr1 11709889 . G . PASS END=11709892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:30,0 chr1 11709893 . T . PASS END=11709893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:28,0 chr1 11709894 . C . PASS END=11709895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:28,0 chr1 11709896 . G . PASS END=11709896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:27,0 chr1 11709897 . C . PASS END=11709899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr1 11709900 . G . PASS END=11709900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 11709901 . C . PASS END=11709901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 11709902 . A . PASS END=11709902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1026:0,57,255:28,0 chr1 11709903 . G . PASS END=11709903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:27,0 chr1 11709904 . G . PASS END=11709907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 11709908 . A . PASS END=11709909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,997:0,60,255:28,0 chr1 11709910 . G . PASS END=11709910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:30,0 chr1 11709911 . A . PASS END=11709911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1030:0,60,255:31,0 chr1 11709912 . C . PASS END=11709923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:30,0 chr1 11709924 . G . PASS END=11709925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 11709926 . C . PASS END=11709930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 11709931 . C . PASS END=11709931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 11710002 . T . PASS END=11710120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1230:0,90,255:40,0 chr1 11710121 . T . PASS END=11710121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 11710122 . T . PASS END=11710124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11710125 . A . PASS END=11710131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1045:0,71,255:26,0 chr1 11710523 . C . PASS END=11710534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 11710535 . G . PASS END=11710535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 11710536 . G . PASS END=11710539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 11710540 . C . PASS END=11710565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 11710566 . C . PASS END=11710566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 11710567 . A . PASS END=11710598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:11,0 chr1 11710599 . C . PASS END=11710599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 11710600 . T . PASS END=11710601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 11710602 . C . PASS END=11710602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 11710603 . T . PASS END=11710604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 11710605 . C . LowGQ END=11710605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 11710606 . A . PASS END=11710615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 11710616 . C . PASS END=11710616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 11710617 . G . PASS END=11710646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr1 11710647 . C . PASS END=11710649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 11710650 . C . PASS END=11710650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 11710651 . C . PASS END=11710651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 11710652 . A . PASS END=11710653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 11710654 . A . PASS END=11710654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr1 11710655 . G . PASS END=11710660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,404:0,33,255:11,0 chr1 11710661 . C . LowGQ END=11710661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr1 11710662 . G . PASS END=11710675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 11710676 . C . PASS END=11710676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 11710677 . C . PASS END=11710677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 11710678 . T . PASS END=11710678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 11710679 . T . PASS END=11710680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 11710681 . C . PASS END=11710681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 11710682 . A . PASS END=11710685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 11710686 . C . PASS END=11710686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:14,0 chr1 11710687 . A . PASS END=11710703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 11710704 . G . PASS END=11710708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:23,0 chr1 11710709 . G . PASS END=11710709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 11710710 . C . PASS END=11710728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:26,0 chr1 11710729 . A . PASS END=11710729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 11710730 . G . PASS END=11710734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 11710735 . G . PASS END=11710735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 11710736 . C . PASS END=11710737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 11710738 . A . PASS END=11710738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 11710739 . G . PASS END=11710749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:29,0 chr1 11710750 . A . PASS END=11710750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:27,0 chr1 11710751 . G . PASS END=11710761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:29,0 chr1 11710762 . G . PASS END=11710772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:34:0,60,900:0,63,255:26,0 chr1 11710773 . C . PASS END=11710773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1148:0,50,255:20,0 chr1 11710774 . A . PASS END=11710776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:35:0,63,945:0,69,255:21,0 chr1 11710777 . T . PASS END=11710777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1150:0,53,255:19,0 chr1 11710778 . A . PASS END=11710778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1166:0,31,255:19,1 chr1 11710779 . C CGCG, 44.09 PASS DP=27;MQ=250.00;MQRankSum=4.140;ReadPosRankSum=-0.591;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,9,0:0.333,0.000:27:6,5,0:12,4,0:44:73,0,50,281,381,662:45,0,255:20,5:4.4090e+01,1.9104e-04,5.3000e+01,2.8660e+02,4.1545e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:7,11,2,7:11,7,6,3 chr1 11710780 . G . LowGQ END=11710780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:0:35:0,0,1041:11,0,255:23,0 chr1 11710781 . C . PASS END=11710783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:35:0,63,945:0,66,255:21,1 chr1 11710784 . C . LowGQ END=11710785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:35:0,0,764:50,0,255:26,4 chr1 11710786 . G . PASS END=11710786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 11710787 . C . LowGQ END=11710787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,12:35:0:35:0,0,558:94,0,255:20,1 chr1 11710788 . G . PASS END=11710789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,91,255:27,0 chr1 11710790 . C . LowGQ END=11710791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:0:36:0,0,574:80,0,255:27,0 chr1 11710792 . G . PASS END=11710792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1046:0,71,255:26,0 chr1 11710793 . C . PASS END=11710793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,973:0,33,255:27,0 chr1 11710794 . C . PASS END=11710794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1127:0,72,255:28,0 chr1 11710795 . G . PASS END=11710795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:43:36:0,43,961:0,43,255:28,0 chr1 11710796 . C . PASS END=11710796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1075:0,74,255:29,0 chr1 11710797 . C . PASS END=11710797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 11710798 . T . LowGQ END=11710798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,11:36:0:36:0,0,592:75,0,255:24,0 chr1 11710799 . C . PASS END=11710799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,91,255:28,0 chr1 11710800 . C . PASS END=11710800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:30,0 chr1 11710801 . T . LowGQ END=11710801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,856:3,0,255:27,0 chr1 11710802 . C . PASS END=11710802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1110:0,72,255:30,0 chr1 11710803 . C . PASS END=11710803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 11710804 . T . LowGQ END=11710804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,828:11,0,255:28,0 chr1 11710805 . C . PASS END=11710805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1071:0,55,255:29,0 chr1 11710806 . C . PASS END=11710806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:31,0 chr1 11710807 . T . LowGQ END=11710807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,8:38:0:38:0,0,888:19,0,255:27,0 chr1 11710808 . G . PASS END=11710808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:25:38:0,25,977:0,25,255:31,0 chr1 11710809 . C . PASS END=11710809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1191:0,81,255:31,0 chr1 11710810 . T . PASS END=11710810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:9:38:0,9,1011:0,9,255:31,0 chr1 11710811 . G . PASS END=11710811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1103:0,61,255:31,0 chr1 11710812 . G . LowGQ END=11710812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1049:14,0,255:32,0 chr1 11710813 . T . PASS END=11710813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1141:0,61,255:31,0 chr1 11710814 . C . PASS END=11710814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1021:0,44,255:30,0 chr1 11710815 . C . PASS END=11710815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1155:0,36,255:30,0 chr1 11710816 . T . PASS END=11710816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1350:0,91,255:30,0 chr1 11710817 . C . PASS END=11710817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1070:0,42,255:28,0 chr1 11710818 . C . PASS END=11710818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,91,255:29,0 chr1 11710819 . G . PASS END=11710819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:8:35:0,8,910:0,8,255:26,0 chr1 11710820 . G . PASS END=11710820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1171:0,44,255:29,0 chr1 11710821 . C . PASS END=11710821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 11710822 . C . PASS END=11710823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,949:0,71,255:29,0 chr1 11710824 . C . PASS END=11710824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1080:0,41,255:30,0 chr1 11710825 . T . LowGQ END=11710825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:35:0,0,845:61,0,255:28,0 chr1 11710826 . C . PASS END=11710826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1005:0,41,255:28,0 chr1 11710827 . C . PASS END=11710827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,88,255:28,0 chr1 11710828 . T . PASS END=11710828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1019:0,41,255:27,0 chr1 11710829 . C . PASS END=11710830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1164:0,85,255:29,0 chr1 11710831 . T . LowGQ END=11710831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,798:36,0,255:25,0 chr1 11710832 . C . PASS END=11710832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:29,0 chr1 11710833 . A . LowGQ END=11710834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,846:3,0,255:27,0 chr1 11710835 . C . PASS END=11710836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1163:0,69,255:28,0 chr1 11710837 . C . PASS END=11710837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 11710838 . T . LowGQ END=11710839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:0:33:0,0,729:12,0,255:25,0 chr1 11710840 . G . PASS END=11710840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:10:33:0,10,915:0,10,255:26,0 chr1 11710841 . C . PASS END=11710841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:7:32:0,7,922:0,7,255:23,0 chr1 11710842 . C . PASS END=11710842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 11710843 . T . PASS END=11710843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,953:0,33,255:24,0 chr1 11710844 . C . PASS END=11710845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:72:33:0,72,1080:0,82,255:24,0 chr1 11710846 . T . PASS END=11710846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,972:0,49,255:23,0 chr1 11710847 . C . PASS END=11710847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1035:0,83,255:23,0 chr1 11710848 . T . LowGQ END=11710848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,7:33:0:33:0,0,773:76,0,255:21,0 chr1 11710849 . G . PASS END=11710849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:15:31:0,15,866:0,15,255:22,0 chr1 11710850 . G . PASS END=11710850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,953:0,43,255:22,0 chr1 11710851 . C . PASS END=11710851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,953:0,21,255:22,0 chr1 11710852 . T . PASS END=11710853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:29:0,43,947:0,43,255:23,0 chr1 11710854 . C . PASS END=11710854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,916:0,15,255:24,0 chr1 11710855 . T . PASS END=11710857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 11710858 . T . PASS END=11710858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:23:28:0,23,924:0,23,255:23,0 chr1 11710859 . C . PASS END=11710869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,976:0,65,255:24,0 chr1 11710870 . T . PASS END=11710871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 11710872 . C . PASS END=11710872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:20,0 chr1 11710873 . T . PASS END=11710873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 11710874 . C . PASS END=11710874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 11710875 . G . PASS END=11710875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 11710876 . G . PASS END=11710879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 11710880 . G . PASS END=11710891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:18:0,47,720:0,47,255:18,0 chr1 11714376 . C . PASS END=11714386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 11714387 . T . PASS END=11714387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr1 11714388 . C . PASS END=11714397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr1 11715697 . C . PASS END=11715707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 11715708 . G . PASS END=11715727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 11715728 . T . PASS END=11715750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr1 11715751 . C . PASS END=11715751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 11715752 . T . PASS END=11715753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11715754 . G . PASS END=11715769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:16,0 chr1 11715803 . A . PASS END=11715805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 11715806 . C . PASS END=11715845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 11715846 . G . PASS END=11715850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 11715851 . G . PASS END=11715871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 11715872 . G . PASS END=11715877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 11715878 . C . PASS END=11715882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 11715883 . G . PASS END=11715883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 11715884 . C . PASS END=11715885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 11715886 . A . PASS END=11715888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 11715889 . A . PASS END=11715895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 11715896 . G . PASS END=11715906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 11715907 . C . PASS END=11715919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,333:0,30,255:10,0 chr1 11715920 . C . PASS END=11715927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 11715928 . C . PASS END=11715942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr1 11715943 . G . PASS END=11715987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,515:0,45,255:18,0 chr1 11715988 . G . PASS END=11715989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 11715990 . T . PASS END=11715990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 11715991 . C . PASS END=11716020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,902:0,72,255:26,0 chr1 11716021 . C . PASS END=11716025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11716026 . C . PASS END=11716026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11716027 . C . PASS END=11716030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 11716031 . T . PASS END=11716038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 11716039 . C . PASS END=11716039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 11716040 . A . PASS END=11716046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr1 11716047 . T . PASS END=11716047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 11716048 . G . PASS END=11716060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 11716061 . A . PASS END=11716061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 11716062 . T . PASS END=11716063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11716064 . A . PASS END=11716064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 11716065 . C . PASS END=11716065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11716066 . T . PASS END=11716106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 11716107 . A . PASS END=11716133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,46,255:19,0 chr1 11716134 . T . PASS END=11716151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 11716152 . C . PASS END=11716157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 11718324 . A . PASS END=11718325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11718326 . G . PASS END=11718326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 11718327 . G . PASS END=11718345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,803:0,62,255:26,0 chr1 11718346 . G . PASS END=11718352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 11718353 . A . PASS END=11718353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 11718354 . A . PASS END=11718407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1194:0,83,255:36,0 chr1 11718408 . T . PASS END=11718408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:34,0 chr1 11718409 . C . PASS END=11718450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1151:0,80,255:35,0 chr1 11718590 . C . PASS END=11718638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:23,0 chr1 11718639 . G . PASS END=11718639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 11718640 . A . PASS END=11718640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 11718641 . G . PASS END=11718641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 11718642 . G . PASS END=11718643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 11718644 . G . PASS END=11718644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11718645 . C . PASS END=11718645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 11718646 . T . PASS END=11718646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11718647 . G . PASS END=11718647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 11718648 . A . PASS END=11718648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:21,0 chr1 11718649 . T . PASS END=11718649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 11718650 . G . PASS END=11718651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr1 11718652 . A . PASS END=11718652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 11718653 . T . PASS END=11718653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr1 11718654 . A . PASS END=11718655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 11718656 . C . PASS END=11718656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr1 11718657 . A . PASS END=11718658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 11718659 . A . PASS END=11718659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 11718660 . C . PASS END=11718660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,0 chr1 11718661 . G . PASS END=11718661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11718662 . G . PASS END=11718662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 11718663 . C . PASS END=11718664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11718665 . G . PASS END=11718670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,753:0,49,255:19,0 chr1 11718671 . C . PASS END=11718671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 11718672 . G . PASS END=11718672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11718673 . A . PASS END=11718673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,673:0,16,255:17,0 chr1 11718674 . G . PASS END=11718676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:18,0 chr1 11718677 . C . PASS END=11718677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 11718678 . A . PASS END=11718679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,605:0,8,255:17,0 chr1 11718680 . G . PASS END=11718682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 11718683 . C . PASS END=11718683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:16,0 chr1 11718684 . T . PASS END=11718685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 11718793 . G . PASS END=11718794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11718795 . T . PASS END=11718795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 11718796 . C . PASS END=11718799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr1 11718800 . G . PASS END=11718800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 11718801 . C . PASS END=11718801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11718802 . C . PASS END=11718802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 11718803 . A . PASS END=11718806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11718807 . C . PASS END=11718808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11718809 . G . PASS END=11718819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,792:0,66,255:22,0 chr1 11718820 . C . PASS END=11718820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 11718821 . A . PASS END=11718822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 11718823 . G . PASS END=11718823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 11718824 . T . PASS END=11718828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr1 11718829 . G . PASS END=11718829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 11718830 . C . PASS END=11718834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11718835 . C . PASS END=11718835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 11718836 . G . PASS END=11718854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,665:0,63,255:26,0 chr1 11718855 . C . PASS END=11718861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11718862 . G . PASS END=11718862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 11718863 . C . PASS END=11718881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1133:0,90,255:30,0 chr1 11718882 . C . PASS END=11718882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 11718883 . A . PASS END=11718893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11718894 . C . PASS END=11718916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 11718917 . A . PASS END=11718917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr1 11718918 . A . PASS END=11718920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 11718921 . G . PASS END=11718921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 11718922 . G . PASS END=11718928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11721187 . G . PASS END=11721210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,336:0,33,255:13,0 chr1 11721211 . C . PASS END=11721211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 11721212 . C . PASS END=11721228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 11721229 . A . PASS END=11721229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:14,0 chr1 11721230 . T . PASS END=11721232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 11721233 . G . PASS END=11721233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 11721234 . G . PASS END=11721242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 11721243 . C . PASS END=11721250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 11721251 . T . PASS END=11721251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 11721252 . G . PASS END=11721331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:13,0 chr1 11721332 . A . PASS END=11721335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 11721336 . C . PASS END=11721339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11721340 . A . PASS END=11721353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 11721354 . G . PASS END=11721362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 11728716 . A . PASS END=11728724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr1 11728725 . C . PASS END=11728744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 11728745 . G . PASS END=11728770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,482:0,42,255:19,0 chr1 11728771 . A . PASS END=11728775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 11728776 . C . PASS END=11728776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 11728777 . T . PASS END=11728794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr1 11728795 . A . PASS END=11728795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 11728796 . C . PASS END=11728812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:23,0 chr1 11728813 . T . PASS END=11728813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 11728814 . G . PASS END=11728834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:24,0 chr1 11728835 . C . PASS END=11728835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 11728836 . T . PASS END=11728881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:23,0 chr1 11728882 . G . PASS END=11728882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 11728883 . C . PASS END=11728883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 11728884 . A . PASS END=11728884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11728885 . A . PASS END=11728890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11728891 . T . PASS END=11728912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 11728913 . G . PASS END=11728913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 11728914 . G . PASS END=11728914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11728915 . A . PASS END=11728927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 11728928 . C . PASS END=11728928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 11728929 . G . PASS END=11728929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 11728930 . T . PASS END=11728930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 11728931 . G . PASS END=11728941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,480:0,42,255:14,0 chr1 11728942 . A . PASS END=11728944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 11728945 . T . PASS END=11728945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 11728946 . C . PASS END=11728951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 11728952 . C T, 50.00 PASS DP=14;MQ=182.46;MQRankSum=0.663;ReadPosRankSum=3.204;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:5,5,0:2,2,0:48:85,0,50,250,244,494:229,0,229:4,0:5.0000e+01,6.5233e-05,5.3000e+01,2.5037e+02,2.7876e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,6,1,6:1,6,3,4 chr1 11728953 . T . PASS END=11728977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 11728978 . T . PASS END=11728989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 11728990 . C . PASS END=11729001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 11731323 . A . PASS END=11731439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1215:0,92,255:40,0 chr1 11731440 . C . PASS END=11731443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,108,255:26,0 chr1 11731444 . C . PASS END=11731447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:28,0 chr1 11731448 . G . PASS END=11731449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr1 11731985 . A . PASS END=11732080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:29:0,83,1086:0,83,255:40,0 chr1 11733334 . G . PASS END=11733368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,799:0,69,255:26,0 chr1 11733369 . A . PASS END=11733375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 11733376 . A . PASS END=11733376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,804:0,64,255:26,0 chr1 11733377 . G . PASS END=11733377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 11733378 . T . PASS END=11733379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11733380 . C . PASS END=11733432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 11733433 . G . PASS END=11733442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 11733443 . C . PASS END=11733443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:22,0 chr1 11733444 . A . PASS END=11733453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr1 11733454 . T . PASS END=11733469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:19,0 chr1 11733672 . G . PASS END=11733676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,765:0,50,255:19,0 chr1 11733677 . C . PASS END=11733682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11733683 . C . PASS END=11733683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 11733684 . T . PASS END=11733690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 11733691 . A . PASS END=11733691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 11733692 . C . PASS END=11733697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,754:0,63,255:24,0 chr1 11733698 . C . PASS END=11733698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 11733699 . C . PASS END=11733711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:24:0,65,886:0,65,255:26,0 chr1 11733712 . A . PASS END=11733716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 11733717 . C . PASS END=11733717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 11733718 . T . PASS END=11733719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr1 11733720 . T . PASS END=11733720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 11733721 . T . PASS END=11733725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 11733726 . C . PASS END=11733726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 11733727 . A . PASS END=11733729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 11733730 . G . PASS END=11733730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11733731 . G . PASS END=11733732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11733733 . G . PASS END=11733733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11733734 . C . PASS END=11733743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 11733744 . C . PASS END=11733744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 11733745 . A . PASS END=11733747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1202:0,86,255:31,0 chr1 11733748 . A . PASS END=11733748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1144:0,53,255:27,0 chr1 11733749 . C . PASS END=11733751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 11733752 . G . PASS END=11733752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:30,0 chr1 11733753 . G . PASS END=11733849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1036:0,82,255:34,0 chr1 11733850 . A . PASS END=11733850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:28,0 chr1 11733851 . G . PASS END=11733877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:33,0 chr1 11733878 . G . PASS END=11733878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 11733879 . C . PASS END=11733880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 11733881 . C . PASS END=11733888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1108:0,77,255:26,0 chr1 11733889 . C . PASS END=11733890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 11733891 . G . PASS END=11733892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:27,0 chr1 11733893 . T . PASS END=11733894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11733895 . T . PASS END=11733908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 11734832 . T . PASS END=11734873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1194:0,86,255:34,0 chr1 11735139 . C . PASS END=11735157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1353:0,104,255:40,0 chr1 11735158 . A . PASS END=11735158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1335:0,76,255:39,0 chr1 11735159 . T . PASS END=11735222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,90,255:40,0 chr1 11735223 . G . PASS END=11735223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,0 chr1 11735224 . G . PASS END=11735226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 11735227 . A . PASS END=11735231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 11735713 . A . PASS END=11735783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1215:0,86,255:40,0 chr1 11735784 . A . PASS END=11735788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 11736103 . C . PASS END=11736113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 11736114 . T . PASS END=11736114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:27,0 chr1 11736115 . G . PASS END=11736124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:31,0 chr1 11736125 . G . PASS END=11736125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr1 11736126 . G . PASS END=11736158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1174:0,80,255:33,0 chr1 11736159 . C . PASS END=11736159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 11736160 . G . PASS END=11736161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 11736162 . A . PASS END=11736162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1052:0,79,255:29,0 chr1 11736163 . G . PASS END=11736165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:29,0 chr1 11736166 . G . PASS END=11736166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 11736167 . C . PASS END=11736169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 11736170 . C . PASS END=11736170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 11736171 . T . PASS END=11736182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 11736183 . A . PASS END=11736183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:27,0 chr1 11736184 . A . PASS END=11736184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11736185 . C . PASS END=11736197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:25,0 chr1 11736866 . C . PASS END=11736866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 11736867 . T . PASS END=11736867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 11736868 . G . PASS END=11737005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:31:0,86,1172:0,86,255:40,0 chr1 11737600 . C . PASS END=11737602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 11737603 . C . PASS END=11737603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 11737604 . T . PASS END=11737620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 11737621 . G . PASS END=11737621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 11737622 . C . PASS END=11737624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 11737625 . T . PASS END=11737625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 11737626 . G . PASS END=11737627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 11737628 . A . PASS END=11737628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 11737629 . G . PASS END=11737634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,878:0,72,255:24,0 chr1 11737635 . C . PASS END=11737635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 11737636 . C . PASS END=11737649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 11737650 . T . PASS END=11737650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 11737651 . C . PASS END=11737652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 11737653 . G . PASS END=11737653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 11737654 . C . PASS END=11737655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11737656 . C . PASS END=11737656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 11737657 . C . PASS END=11737666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 11737667 . G . PASS END=11737671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11740410 . C . PASS END=11740437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1123:0,80,255:34,0 chr1 11740438 . T . PASS END=11740438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 11740439 . T . PASS END=11740508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1234:0,91,255:38,0 chr1 11740509 . G . PASS END=11740509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:33,0 chr1 11740510 . C . PASS END=11740521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1271:0,89,255:34,0 chr1 11740522 . G . PASS END=11740522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:29,0 chr1 11740523 . C . PASS END=11740526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1241:0,86,255:30,0 chr1 11740527 . C . PASS END=11740527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 11740528 . A . PASS END=11740528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 11740529 . C . PASS END=11740529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:27,0 chr1 11740530 . T . PASS END=11740531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 11740532 . C . PASS END=11740532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:27,0 chr1 11740533 . A . PASS END=11740541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 11740542 . C . PASS END=11740544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 11740564 . A . PASS END=11740574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 11740575 . C . PASS END=11740575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 11740576 . C . PASS END=11740584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr1 11740585 . C . PASS END=11740585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11740586 . C . PASS END=11740587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11740588 . G . PASS END=11740588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11740589 . C . PASS END=11740589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 11740590 . C . PASS END=11740594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 11740595 . G . PASS END=11740597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 11740598 . C . PASS END=11740598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11740599 . C . PASS END=11740599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 11740600 . G . PASS END=11740601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11740602 . A . PASS END=11740602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1059:0,60,255:25,0 chr1 11740603 . G . PASS END=11740603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11740604 . G . PASS END=11740604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 11740605 . T . PASS END=11740607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 11740608 . A . PASS END=11740608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 11740609 . G . PASS END=11740618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 11740619 . C . PASS END=11740630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,928:0,68,255:26,0 chr1 11740631 . T . PASS END=11740633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 11740634 . G . PASS END=11740634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 11740635 . G . PASS END=11740635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11740636 . T . PASS END=11740636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 11740637 . C . PASS END=11740648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 11740649 . G . PASS END=11740658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 11746772 . A . PASS END=11746813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,120,1438:0,120,255:40,0 chr1 11746814 . C . PASS END=11746826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,100,1800:0,100,255:40,0 chr1 11746827 . C . PASS END=11746827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1759:0,67,255:40,0 chr1 11746828 . A . PASS END=11746830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,120,255:40,0 chr1 11748071 . C . PASS END=11748229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1215:0,94,255:40,0 chr1 11748230 . G . PASS END=11748235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 11766306 . G . PASS END=11766317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 11766318 . G . PASS END=11766318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:29,0 chr1 11766319 . G . PASS END=11766320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 11766321 . T . PASS END=11766321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr1 11766322 . G . PASS END=11766401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:39,0 chr1 11766402 . A . PASS END=11766402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 11766403 . C . PASS END=11766414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,86,255:30,0 chr1 11766415 . G . PASS END=11766415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 11766416 . C . PASS END=11766426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:29,0 chr1 11766427 . C . PASS END=11766427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 11766428 . C . PASS END=11766433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 11766434 . A . PASS END=11766434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 11766435 . T . PASS END=11766441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,952:0,87,255:29,0 chr1 11766442 . G . PASS END=11766442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 11766443 . A . PASS END=11766449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11766450 . A . PASS END=11766465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:23,0 chr1 11766466 . A . PASS END=11766477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,69,255:18,0 chr1 11766478 . A . PASS END=11766478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 11766479 . G . PASS END=11766481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,44,255:15,0 chr1 11766482 . A . PASS END=11766485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 11766486 . C . PASS END=11766491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 11766492 . G . PASS END=11766492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 11766493 . C . PASS END=11766495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,635:0,51,255:18,0 chr1 11766496 . G . PASS END=11766496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 11766497 . G . PASS END=11766504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,654:0,57,255:19,0 chr1 11766505 . A . PASS END=11766505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:17,0 chr1 11766506 . A . PASS END=11766506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 11766507 . G . PASS END=11766508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,701:0,24,255:19,0 chr1 11766509 . A . PASS END=11766509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11766510 . G . PASS END=11766511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,668:0,11,255:17,0 chr1 11766512 . A . PASS END=11766518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:19,0 chr1 11766519 . C . PASS END=11766520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 11766521 . C . PASS END=11766522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,682:0,21,255:19,0 chr1 11766523 . G . PASS END=11766529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 11766530 . C . PASS END=11766530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 11766531 . C . PASS END=11766535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr1 11766536 . A . PASS END=11766536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11766537 . G . PASS END=11766538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 11766539 . C . PASS END=11766539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 11766540 . C . PASS END=11766541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 11766542 . A . PASS END=11766542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 11766543 . G . PASS END=11766546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 11766547 . G . PASS END=11766547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 11766548 . G . PASS END=11766552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 11766553 . G . PASS END=11766553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 11766554 . T . PASS END=11766568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 11766569 . G . PASS END=11766569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 11766570 . G . PASS END=11766581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,939:0,64,255:26,0 chr1 11766582 . G . PASS END=11766582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:25,0 chr1 11766583 . C . PASS END=11766587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 11766588 . A . PASS END=11766588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,907:0,42,255:25,0 chr1 11766589 . G . PASS END=11766589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11766590 . A . PASS END=11766592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 11766593 . C . PASS END=11766593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:27,0 chr1 11766594 . T . PASS END=11766594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 11766595 . G . PASS END=11766595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 11766596 . A . PASS END=11766597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 11766598 . G . PASS END=11766598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 11766599 . G . PASS END=11766599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 11766600 . G . PASS END=11766600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 11766601 . C . PASS END=11766601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr1 11766602 . T . PASS END=11766607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11766608 . C . PASS END=11766608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 11766609 . T . PASS END=11766609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11766610 . G . PASS END=11766614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 11766615 . G . PASS END=11766622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1056:0,82,255:34,0 chr1 11766623 . C . PASS END=11766623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr1 11766624 . A . PASS END=11766678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:34:0,98,1235:0,98,255:40,2 chr1 11766679 . A . PASS END=11766679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:73:53:0,73,1669:0,73,255:40,2 chr1 11766680 . A . PASS END=11766759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1215:0,91,255:40,0 chr1 11766760 . C . PASS END=11766766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11767292 . A . PASS END=11767335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:65:0,120,1800:0,152,255:40,0 chr1 11769332 . G . PASS END=11769332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 11769333 . C . PASS END=11769333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11769334 . C . PASS END=11769334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 11769335 . G . PASS END=11769336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 11769337 . G . PASS END=11769337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:23,0 chr1 11769338 . C . PASS END=11769338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11769339 . C . PASS END=11769339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 11769340 . T . PASS END=11769340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11769341 . T . PASS END=11769341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 11769342 . G . PASS END=11769342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11769343 . G . PASS END=11769344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:23,0 chr1 11769345 . C . PASS END=11769345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11769346 . C . PASS END=11769348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 11769349 . G . PASS END=11769351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1031:0,71,255:27,0 chr1 11769352 . C . PASS END=11769353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11769354 . C . PASS END=11769354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 11769355 . A . PASS END=11769356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:30:0,54,1033:0,54,255:29,0 chr1 11769357 . C . PASS END=11769358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 11769359 . C . PASS END=11769360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 11769361 . C . PASS END=11769363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:31,0 chr1 11769364 . A . PASS END=11769367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:31,0 chr1 11769368 . A . PASS END=11769368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 11769369 . G . PASS END=11769373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1139:0,80,255:31,0 chr1 11769374 . C . PASS END=11769374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,0 chr1 11769375 . A . PASS END=11769375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1224:0,83,255:31,0 chr1 11769376 . G . PASS END=11769376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:29,0 chr1 11769377 . A . PASS END=11769378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1119:0,82,255:29,0 chr1 11769379 . C . PASS END=11769379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:30,0 chr1 11769380 . T . PASS END=11769394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1111:0,82,255:32,0 chr1 11769395 . T . PASS END=11769408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:27:0,78,1170:0,81,255:26,0 chr1 11769409 . A . PASS END=11769409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11769410 . T . PASS END=11769413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 11769414 . G . PASS END=11769415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11769416 . A . PASS END=11769421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 11769422 . C . PASS END=11769426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11769427 . A . PASS END=11769427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11769428 . G . PASS END=11769431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11769432 . G . PASS END=11769432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr1 11769433 . G . PASS END=11769433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 11769434 . C . PASS END=11769435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11769436 . C . PASS END=11769453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,868:0,61,255:26,0 chr1 11769454 . A . PASS END=11769455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11769456 . C . PASS END=11769482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr1 11769483 . A . PASS END=11769483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 11769484 . G . PASS END=11769485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 11769486 . G . PASS END=11769513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,50,255:19,0 chr1 11769514 . C . PASS END=11769514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:14,0 chr1 11769515 . G . PASS END=11769519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 11769520 . C . PASS END=11769522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11771908 . C . PASS END=11771914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 11771915 . A . PASS END=11771915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:30,0 chr1 11771916 . G . PASS END=11771948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,104,1429:0,104,255:40,0 chr1 11771949 . G . PASS END=11771987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,114,1710:0,120,255:40,0 chr1 11771988 . A G, 50.00 PASS DP=40;MQ=243.09;MQRankSum=4.388;ReadPosRankSum=3.115;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:9,11,0:10,10,0:48:85,0,50,741,679,1420:255,0,255:18,0:5.0000e+01,6.6269e-05,5.2788e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,10,11:7,12,12,9 chr1 11771989 . A . PASS END=11771998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1395:0,98,255:37,0 chr1 11771999 . G A, 50.00 PASS DP=38;MQ=242.72;MQRankSum=2.248;ReadPosRankSum=3.299;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:10,9,0:9,10,0:48:85,0,50,667,650,1317:255,0,255:15,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,13,10,9:11,8,10,9 chr1 11772000 . T . PASS END=11772022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:34,0 chr1 11772397 . A . PASS END=11772486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:43:0,87,1305:0,107,255:40,0 chr1 11775176 . G . PASS END=11775265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:35:0,93,1186:0,103,255:40,0 chr1 11779641 . G . PASS END=11779649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 11779650 . G . PASS END=11779658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 11779659 . A . PASS END=11779659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,871:0,67,255:27,0 chr1 11779660 . A . PASS END=11779675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr1 11779676 . A . PASS END=11779676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11779677 . G . PASS END=11779677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 11779678 . G . PASS END=11779678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 11779679 . G . PASS END=11779684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11779685 . C . PASS END=11779695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11779696 . G . PASS END=11779696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11779697 . C . PASS END=11779712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,968:0,68,255:26,0 chr1 11779713 . A . PASS END=11779716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11779717 . G . PASS END=11779717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 11779718 . G . PASS END=11779721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 11779722 . A . PASS END=11779722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 11779723 . C . PASS END=11779724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 11779725 . G . PASS END=11779725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 11779726 . C . PASS END=11779753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 11796266 . A . PASS END=11796292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1066:0,87,255:30,0 chr1 11804590 . T . PASS END=11804625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 11805860 . G . PASS END=11805894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,155,255:40,0 chr1 11806045 . G . PASS END=11806047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 11806048 . T . PASS END=11806056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 11806057 . C . PASS END=11806058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11806059 . C . PASS END=11806060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1023:0,71,255:26,0 chr1 11806061 . C . PASS END=11806174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1260:0,90,255:40,0 chr1 11806184 . C . PASS END=11806255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:34:0,87,1279:0,89,255:40,0 chr1 11806256 . A . PASS END=11806265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,74,255:28,0 chr1 11806266 . C . PASS END=11806280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:18:0,45,675:0,53,255:18,0 chr1 11807497 . G . PASS END=11807501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 11807502 . G . PASS END=11807510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr1 11807511 . T . PASS END=11807511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:29,0 chr1 11807512 . C . PASS END=11807556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1125:0,86,255:34,0 chr1 11807557 . C . PASS END=11807557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:29,0 chr1 11807558 . G . PASS END=11807562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 11807563 . G . PASS END=11807563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr1 11807564 . G . PASS END=11807581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1111:0,87,255:30,0 chr1 11807582 . T . PASS END=11807582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 11807583 . C . PASS END=11807583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 11807584 . C . PASS END=11807584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 11807585 . A . PASS END=11807585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 11807586 . T . PASS END=11807586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 11807587 . C . PASS END=11807594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr1 11807595 . T . PASS END=11807602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 11808472 . T . PASS END=11808475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr1 11808476 . T . PASS END=11808476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 11808477 . G . PASS END=11808487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 11808488 . T . PASS END=11808488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 11808489 . G . PASS END=11808492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11808493 . A . PASS END=11808493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 11808494 . C . PASS END=11808494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr1 11808495 . C . PASS END=11808495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 11808496 . A . PASS END=11808496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 11808497 . T . PASS END=11808510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,793:0,62,255:26,0 chr1 11808511 . G . PASS END=11808511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 11808512 . T . PASS END=11808512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 11808513 . G . PASS END=11808520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 11808521 . G . PASS END=11808532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 11808533 . C . PASS END=11808534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 11808535 . C . PASS END=11808536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11808537 . G . PASS END=11808538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11808539 . T . PASS END=11808541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 11808542 . G . PASS END=11808559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:28,0 chr1 11808560 . G . PASS END=11808560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 11808561 . C . PASS END=11808562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,993:0,84,255:28,0 chr1 11808563 . T . PASS END=11808563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 11808564 . T . PASS END=11808566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 11808567 . C . PASS END=11808567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 11808568 . G . PASS END=11808568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11808569 . T . PASS END=11808576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:25,0 chr1 11808577 . G . PASS END=11808578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:21,0 chr1 11808579 . C . PASS END=11808585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:22,0 chr1 11808586 . A . PASS END=11808586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 11808587 . G . PASS END=11808589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 11808590 . T . PASS END=11808633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 11808634 . C . PASS END=11808667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 11810134 . G . PASS END=11810134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 11810135 . T . PASS END=11810135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 11810136 . T . PASS END=11810138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 11810139 . C . PASS END=11810139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 11810140 . T . PASS END=11810164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:19,0 chr1 11810165 . C . PASS END=11810169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11810170 . A . PASS END=11810170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 11810171 . G . PASS END=11810181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 11810182 . C . PASS END=11810182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 11810183 . A . PASS END=11810187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11810188 . A . PASS END=11810188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 11810189 . G . PASS END=11810191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 11810192 . G . PASS END=11810199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 11810200 . A . PASS END=11810200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,705:0,27,255:17,0 chr1 11810201 . T . PASS END=11810251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 11810252 . C . PASS END=11810252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 11810253 . C . PASS END=11810275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,637:0,48,255:18,0 chr1 11810276 . C . PASS END=11810276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 11810277 . C . PASS END=11810291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 11810292 . T . PASS END=11810294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11810295 . C . PASS END=11810343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,505:0,44,255:19,0 chr1 11821844 . A . PASS END=11821854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 11821855 . G . PASS END=11821874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 11821875 . A . PASS END=11821885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 11821886 . C . PASS END=11821886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 11821887 . C . PASS END=11821912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,729:0,57,255:19,0 chr1 11821913 . G . PASS END=11821916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 11821917 . T . PASS END=11821918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,820:0,53,255:20,0 chr1 11821919 . G . PASS END=11821923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 11821924 . T . PASS END=11821928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 11821929 . A . PASS END=11821935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr1 11821936 . T . PASS END=11821936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 11821937 . G . PASS END=11821952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,939:0,69,255:26,0 chr1 11821953 . T . PASS END=11821954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 11821955 . C . PASS END=11821955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 11821956 . G . PASS END=11821958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 11821959 . G . PASS END=11821959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 11821960 . G . PASS END=11822009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1039:0,81,255:34,0 chr1 11822010 . T . PASS END=11822010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 11822011 . G . PASS END=11822108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1139:0,80,255:37,0 chr1 11822109 . T . PASS END=11822109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1197:0,77,255:27,0 chr1 11822110 . C . PASS END=11822122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:30,0 chr1 11822123 . A . PASS END=11822123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:27,0 chr1 11822124 . A . PASS END=11822132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 11822133 . G . PASS END=11822133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr1 11822134 . G . PASS END=11822145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 11822146 . T . PASS END=11822146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr1 11822147 . T . PASS END=11822148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11822149 . C . PASS END=11822173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:22:0,60,900:0,60,255:25,0 chr1 11822174 . T . PASS END=11822174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 11822175 . A . PASS END=11822177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 11822178 . A . PASS END=11822183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 11822184 . T . PASS END=11822184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11822185 . C . PASS END=11822185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 11822186 . G . PASS END=11822187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11822188 . T . PASS END=11822188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 11822189 . G . PASS END=11822192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 11822193 . A . PASS END=11822235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 11822236 . A . PASS END=11822237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 11822238 . G . PASS END=11822240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 11822241 . C . PASS END=11822242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 11822243 . G . PASS END=11822250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 11822251 . A . PASS END=11822259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11822260 . C . PASS END=11822266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11822267 . G . PASS END=11822282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11822283 . C . PASS END=11822294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 11822295 . G . PASS END=11822322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,402:0,33,255:12,0 chr1 11822323 . T . PASS END=11822323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 11822324 . C . PASS END=11822331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 11823779 . A . PASS END=11823803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1188:0,90,255:33,0 chr1 11823804 . G . PASS END=11823804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 11823805 . G . PASS END=11823820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:33,0 chr1 11823821 . G . PASS END=11823821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 11823822 . G . PASS END=11823827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11823828 . A . PASS END=11823832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11823833 . G . PASS END=11823833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11823834 . G . PASS END=11823843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11824388 . G . PASS END=11824400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,913:0,62,255:26,0 chr1 11824401 . A . PASS END=11824518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,903:0,81,255:40,0 chr1 11824519 . C . PASS END=11824539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1325:0,95,255:38,0 chr1 11825914 . A . PASS END=11825914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:16,0 chr1 11825915 . G . PASS END=11825938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,530:0,51,255:18,0 chr1 11825939 . G . PASS END=11825939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 11825940 . G . PASS END=11825942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 11825943 . A . PASS END=11825943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 11825944 . T . PASS END=11826022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 11826023 . A . PASS END=11826023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 11826024 . G . PASS END=11826029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,706:0,57,255:19,0 chr1 11826030 . G . PASS END=11826039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,914:0,72,255:24,0 chr1 11826040 . A . PASS END=11826040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 11826041 . G . PASS END=11826067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,791:0,69,255:23,0 chr1 11826068 . G . PASS END=11826068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 11826069 . G . PASS END=11826090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,876:0,69,255:26,0 chr1 11826091 . G . PASS END=11826095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 11826096 . G . PASS END=11826096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 11826097 . C . PASS END=11826121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:30,0 chr1 11826122 . G . PASS END=11826122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:29,0 chr1 11826123 . G . PASS END=11826127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:31,0 chr1 11826128 . T . PASS END=11826128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr1 11826129 . T . PASS END=11826163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1215:0,83,255:33,0 chr1 11826164 . G . PASS END=11826180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,988:0,73,255:26,0 chr1 11826181 . G . PASS END=11826182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11826183 . A . PASS END=11826200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,955:0,68,255:26,0 chr1 11826201 . A . PASS END=11826207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 11826208 . A . PASS END=11826237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,65,255:25,0 chr1 11826238 . G . PASS END=11826255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,56,255:19,0 chr1 11826256 . A . PASS END=11826256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 11826257 . G . PASS END=11826294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 11826295 . G . PASS END=11826299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 11826300 . C . PASS END=11826314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 11826315 . C . PASS END=11826316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11826317 . A . PASS END=11826318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 11826319 . T . PASS END=11826333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,407:0,39,255:13,0 chr1 11826334 . C . PASS END=11826334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 11826335 . C . PASS END=11826387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,364:0,30,255:13,0 chr1 11826388 . G . PASS END=11826388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 11826389 . G . PASS END=11826390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11826391 . C . PASS END=11826391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 11826392 . C . PASS END=11826393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 11826394 . C . PASS END=11826397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11826398 . A . PASS END=11826408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr1 11826409 . C . PASS END=11826412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11826413 . C . PASS END=11826415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11826416 . T . PASS END=11826417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11826418 . G . PASS END=11826432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 11826433 . G . PASS END=11826433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:13,0 chr1 11826434 . C . PASS END=11826434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11826435 . C . PASS END=11826435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 11826436 . T . PASS END=11826451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:17,0 chr1 11826452 . T . PASS END=11826452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 11826453 . C . PASS END=11826476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,585:0,54,255:19,0 chr1 11826477 . G . PASS END=11826484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 11826485 . A . PASS END=11826485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 11826486 . C . PASS END=11826487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 11826488 . T . PASS END=11826488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 11826489 . C . PASS END=11826498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,821:0,66,255:23,0 chr1 11826499 . A . PASS END=11826499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 11826500 . G . PASS END=11826500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 11826501 . G . PASS END=11826529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 11826530 . T . PASS END=11826530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 11826531 . C . PASS END=11826531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 11826532 . A . PASS END=11826532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 11826533 . G . PASS END=11826569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:24,0 chr1 11826570 . T . PASS END=11826570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 11826571 . C . PASS END=11826571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 11826572 . T . PASS END=11826572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 11826573 . G . PASS END=11826583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 11826584 . G . PASS END=11826584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:19,0 chr1 11826585 . G . PASS END=11826592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 11826593 . G . PASS END=11826599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 11826600 . C . PASS END=11826608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 11826609 . T . PASS END=11826615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 11826616 . C . PASS END=11826617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 11826618 . C . PASS END=11826629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 11826630 . C T, 50.00 PASS DP=23;MQ=248.89;MQRankSum=3.370;ReadPosRankSum=0.157;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,14,0:0.609,0.000:23:4,7,0:5,7,0:47:85,0,48,490,322,812:255,0,255:9,0:5.0000e+01,8.1024e-05,5.0623e+01,4.5000e+02,3.5671e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,7,7:6,3,4,10 chr1 11826631 . C . PASS END=11826658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,61,255:23,0 chr1 11826659 . C . PASS END=11826659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:21,0 chr1 11826660 . G . PASS END=11826667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 11826668 . C . PASS END=11826688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:22,0 chr1 11826689 . C . PASS END=11826689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:19,0 chr1 11826690 . C . PASS END=11826707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,864:0,61,255:24,0 chr1 11826708 . C . PASS END=11826708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 11826709 . T . PASS END=11826709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 11826710 . T . PASS END=11826710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 11826711 . G . PASS END=11826711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 11826712 . C . PASS END=11826712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 11826713 . T . PASS END=11826720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 11826721 . A . PASS END=11826721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 11826722 . T . PASS END=11826723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11826724 . G . PASS END=11826787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,668:0,46,255:19,0 chr1 11826788 . C . PASS END=11826791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11826792 . G . PASS END=11826803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11826804 . C . PASS END=11826834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr1 11826835 . T . PASS END=11826836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 11826837 . G . PASS END=11826837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 11826838 . G . PASS END=11826847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 11826848 . C . PASS END=11826870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 11826871 . A . PASS END=11826879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 11826880 . C . PASS END=11826888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 11826889 . A . PASS END=11826894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 11826895 . T . PASS END=11826895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 11826896 . A . PASS END=11826923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,676:0,54,255:19,0 chr1 11826924 . T . PASS END=11826924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 11826925 . C . PASS END=11826957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:19,0 chr1 11826958 . G . PASS END=11826961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 11826962 . C . PASS END=11826979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 11826980 . C . PASS END=11826982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 11826983 . G . PASS END=11826985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11826986 . G . PASS END=11826989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11826990 . G . PASS END=11826990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11826991 . A . PASS END=11827001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 11827002 . T . PASS END=11827002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 11827003 . C . PASS END=11827008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,861:0,66,255:23,0 chr1 11827009 . T . PASS END=11827009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:22,0 chr1 11827010 . C . PASS END=11827016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,952:0,84,255:29,0 chr1 11827017 . A . PASS END=11827017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 11827018 . C . PASS END=11827029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 11827030 . T . PASS END=11827030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 11827031 . C . PASS END=11827041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 11827042 . A . PASS END=11827042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 11827043 . G . PASS END=11827057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 11827058 . G . PASS END=11827059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 11827060 . C . PASS END=11827068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11827069 . A . PASS END=11827069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 11827070 . G . PASS END=11827070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11827071 . C . PASS END=11827082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 11827083 . G . PASS END=11827083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 11827084 . A . PASS END=11827084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 11827085 . G . PASS END=11827129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1141:0,80,255:34,0 chr1 11827130 . C . PASS END=11827131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 11827132 . G . PASS END=11827133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 11827134 . G . PASS END=11827140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 11827141 . A . PASS END=11827141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,979:0,51,255:26,0 chr1 11827142 . G . PASS END=11827142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11827278 . A . PASS END=11827303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:57:0,120,1800:0,128,255:40,0 chr1 11827304 . A G, 233.13 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,24,0:0,38,0:183:271,186,0,2357,186,2357:255,186,0:0,0:2.3313e+02,1.8313e+02,0.0000e+00,4.5000e+02,2.1790e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,33:0,0,23,39 chr1 11827305 . G . PASS END=11827321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,161,255:40,0 chr1 11828134 . C . PASS END=11828136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 11828137 . G . PASS END=11828145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11828146 . G . PASS END=11828171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:17,0 chr1 11828172 . A . PASS END=11828172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 11828173 . C . PASS END=11828173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 11828174 . T . PASS END=11828174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:17,0 chr1 11828175 . T . PASS END=11828200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,607:0,40,255:19,0 chr1 11828201 . G . PASS END=11828204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 11828205 . C . PASS END=11828206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 11828207 . G . PASS END=11828222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 11828223 . G . PASS END=11828237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr1 11828238 . G A, 49.23 PASS DP=29;MQ=250.00;MQRankSum=4.539;ReadPosRankSum=1.908;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,13,0:0.448,0.000:29:7,7,0:9,6,0:48:84,0,50,436,572,1008:255,0,255:16,0:4.9226e+01,7.3776e-05,5.3000e+01,4.3623e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,8,5:11,5,4,9 chr1 11828239 . A . PASS END=11828242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11828243 . T . PASS END=11828244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11828245 . C . PASS END=11828251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 11828252 . G . PASS END=11828252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 11828253 . C . PASS END=11828257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1141:0,90,255:30,0 chr1 11828258 . T . PASS END=11828268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 11828269 . G . PASS END=11828275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 11828276 . C . PASS END=11828276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 11828277 . T . PASS END=11828288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 11828289 . G . PASS END=11828318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 11828319 . G A, 47.62 PASS DP=23;MQ=250.00;MQRankSum=3.937;ReadPosRankSum=0.283;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,9,0:0.391,0.000:23:8,4,0:6,5,0:47:82,0,50,321,501,822:255,0,255:12,0:4.7622e+01,9.6815e-05,5.3000e+01,3.2097e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,4,5:7,7,3,6 chr1 11828320 . G . PASS END=11828328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 11828329 . A . PASS END=11828356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,47,255:19,0 chr1 11828357 . G . PASS END=11828357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 11828358 . G . PASS END=11828359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 11828360 . G . PASS END=11828363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 11828364 . G A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=2.416;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,9,0:0.600,0.000:15:2,6,0:4,3,0:48:85,0,49,314,214,528:255,0,187:3,0:5.0000e+01,7.2740e-05,5.1690e+01,3.1384e+02,2.4922e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,1,8:4,2,2,7 chr1 11828365 . T . PASS END=11828376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 11829030 . T . PASS END=11829050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 11829051 . C . PASS END=11829054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 11829055 . A . PASS END=11829165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,103:0,12,103:6,0 chr1 11829166 . G . PASS END=11829184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,111:3,0 chr1 11831581 . T . PASS END=11831582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 11831583 . C . PASS END=11831583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 11831584 . A . PASS END=11831594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 11831595 . G A, 40.14 PASS DP=35;MQ=250.00;MQRankSum=4.638;ReadPosRankSum=2.687;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,11,0:0.324,0.000:34:15,3,0:8,8,0:40:75,0,50,361,811,1172:255,0,255:22,0:4.0143e+01,4.4190e-04,5.3000e+01,3.6067e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,8,3:13,10,6,5 chr1 11831596 . G . PASS END=11831614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:33:0,93,1395:0,99,255:39,0 chr1 11831615 . C T, 50.00 PASS DP=41;MQ=250.00;MQRankSum=4.816;ReadPosRankSum=1.424;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,29,0:0.725,0.000:40:3,16,0:8,13,0:34:85,0,31,1037,357,1394:255,0,255:11,0:5.0002e+01,1.7329e-03,3.4101e+01,4.5000e+02,3.9135e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,13,16:5,6,16,13 chr1 11831616 . G . PASS END=11831652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,120,1498:0,120,255:40,0 chr1 11831653 . A . PASS END=11831684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,102,1530:0,106,255:40,0 chr1 11831685 . A . PASS END=11831685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 11831686 . A . PASS END=11831686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 11831687 . C . PASS END=11831687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr1 11831688 . T . PASS END=11831693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,105,255:34,0 chr1 11832139 . T . PASS END=11832148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 11832149 . G . PASS END=11832149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 11832150 . T . PASS END=11832151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 11832152 . G . PASS END=11832152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 11832153 . T . PASS END=11832192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,761:0,66,255:25,0 chr1 11832193 . T . PASS END=11832193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 11832194 . G . PASS END=11832209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,931:0,75,255:25,0 chr1 11832210 . G . PASS END=11832210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 11832211 . C . PASS END=11832211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 11832212 . C . PASS END=11832235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,659:0,41,255:19,0 chr1 11832236 . C . PASS END=11832236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 11832237 . C . PASS END=11832243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 11832244 . G . PASS END=11832249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 11832250 . C . PASS END=11832257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:14,0 chr1 11832258 . G . PASS END=11832269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 11832270 . T . PASS END=11832273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 11832274 . T . PASS END=11832280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 11832281 . A . PASS END=11832281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 11832282 . C . PASS END=11832283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 11832284 . G . PASS END=11832307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 11832308 . G . PASS END=11832310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 11832311 . G C, 49.69 PASS DP=7;MQ=250.00;MQRankSum=1.754;ReadPosRankSum=0.550;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,3,0:0.429,0.000:7:2,1,0:2,2,0:48:84,0,50,107,143,250:95,0,134:4,0:4.9688e+01,6.8339e-05,5.3000e+01,1.0731e+02,1.7779e+02,2.5333e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,1,2:0,4,1,2 chr1 11832312 . T . PASS END=11832316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 11835492 . G . PASS END=11835497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 11835498 . C . PASS END=11835498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 11835499 . G . PASS END=11835633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1063:0,80,255:40,0 chr1 11835634 . G . PASS END=11835634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 11835635 . T . PASS END=11835636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr1 11835637 . A . PASS END=11835655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,967:0,65,255:26,0 chr1 11835656 . G . PASS END=11835656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 11835657 . G . PASS END=11835661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 11835662 . A . PASS END=11835662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:23,0 chr1 11835663 . A . PASS END=11835663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 11835664 . G . PASS END=11835664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 11835665 . C . PASS END=11835666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 11835667 . G . PASS END=11835667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 11836521 . G . PASS END=11836531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 11836532 . G . PASS END=11836545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:13,0 chr1 11836546 . C . PASS END=11836565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:19,0 chr1 11836566 . G . PASS END=11836567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 11836568 . G . PASS END=11836578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 11836579 . G . PASS END=11836583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 11836584 . A . PASS END=11836584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 11836585 . G . PASS END=11836590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 11836591 . G . PASS END=11836592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 11836593 . A . PASS END=11836594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11836595 . G . PASS END=11836596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 11836597 . G . PASS END=11836599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,0 chr1 11836600 . A . PASS END=11836600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 11836601 . G . PASS END=11836618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 11836619 . G . PASS END=11836619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 11836620 . A . PASS END=11836627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 11836628 . T C, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=2.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:5,9,0:6,1,0:48:85,0,50,357,386,743:255,0,255:12,0:4.9897e+01,6.6269e-05,5.3000e+01,3.5727e+02,4.2033e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,5,5:5,6,4,6 chr1 11836629 . G . PASS END=11836633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11836634 . C . PASS END=11836634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 11836635 . T . PASS END=11836638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 11836639 . C . PASS END=11836643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 11836644 . G . PASS END=11836644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 11836645 . C . PASS END=11836669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,512:0,41,255:19,0 chr1 11836670 . C . PASS END=11836670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,441:0,3,255:11,0 chr1 11836671 . G . PASS END=11836681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 11836682 . C T, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.165;ReadPosRankSum=-0.627;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,8,0:0.571,0.000:14:3,6,0:3,2,0:48:85,0,49,269,215,483:235,0,226:7,0:5.0000e+01,6.8598e-05,5.2378e+01,2.6884e+02,2.4935e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,3,5:3,3,5,3 chr1 11836683 . G . PASS END=11836685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11836686 . A . PASS END=11836686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 11836687 . G . PASS END=11836695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 11838717 . C . PASS END=11838720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11838721 . T . PASS END=11838721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 11838722 . T . PASS END=11838723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 11838724 . T . PASS END=11838724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:15,0 chr1 11838725 . T . PASS END=11838726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 11838727 . C . PASS END=11838727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 11838728 . A . PASS END=11838747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,653:0,51,255:19,0 chr1 11838748 . C . PASS END=11838760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:24,0 chr1 11838761 . T . PASS END=11838761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 11838762 . G . PASS END=11838786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr1 11838787 . G . PASS END=11838794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 11838795 . T . PASS END=11838795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 11838796 . G . PASS END=11838798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 11838799 . A . PASS END=11838803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11838804 . A . PASS END=11838804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11838805 . A . PASS END=11838805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 11838806 . G . PASS END=11838807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11838808 . T . PASS END=11838808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 11838809 . G . PASS END=11838809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:25,0 chr1 11838810 . C . PASS END=11838810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11838811 . A . PASS END=11838816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1141:0,90,255:30,0 chr1 11838817 . A . PASS END=11838818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:27,0 chr1 11838819 . C . PASS END=11838823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 11838824 . C . PASS END=11838827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:24,0 chr1 11838828 . T . PASS END=11838828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,946:0,48,255:22,0 chr1 11838829 . C . PASS END=11838839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:25:0,60,900:0,62,255:22,0 chr1 11838840 . G . PASS END=11838840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:20,0 chr1 11838841 . A . PASS END=11838843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 11838844 . A . PASS END=11838844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 11838845 . G . PASS END=11838847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 11838848 . G T, 47.54 PASS DP=23;MQ=248.04;MQRankSum=3.937;ReadPosRankSum=1.858;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,9,0:0.391,0.000:23:6,5,0:8,4,0:46:82,0,50,292,470,762:255,0,255:15,0:4.7543e+01,9.8109e-05,5.3000e+01,2.9215e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,4,5:9,5,8,1 chr1 11838849 . C . PASS END=11838863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:19:0,48,720:0,56,255:18,0 chr1 11838864 . T . PASS END=11838864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:16,0 chr1 11838865 . C . PASS END=11838872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,698:0,44,255:17,0 chr1 11838873 . G . PASS END=11838873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 11838983 . G . PASS END=11838996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr1 11838997 . C . PASS END=11838997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 11838998 . A . PASS END=11839031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:19,0 chr1 11839032 . G . PASS END=11839032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 11839033 . G . PASS END=11839122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:18,0 chr1 11839123 . T . PASS END=11839123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 11839124 . A . PASS END=11839129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 11839130 . C . PASS END=11839137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 11839859 . C . PASS END=11839881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:23,0 chr1 11839882 . G . PASS END=11839882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 11839883 . G . PASS END=11839904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,795:0,69,255:25,0 chr1 11839905 . A . PASS END=11839905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 11839906 . G . PASS END=11839912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,825:0,61,255:26,0 chr1 11839913 . G . PASS END=11839925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1019:0,81,255:29,0 chr1 11839926 . G . PASS END=11839934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 11839935 . C . PASS END=11839965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,73,255:26,0 chr1 11839966 . G A, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.480;ReadPosRankSum=2.045;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:5,4,0:9,10,0:47:85,0,47,185,185,185:255,0,255:14,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,8,7,7:5,9,7,7 chr1 11839967 . T . PASS END=11839970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 11839971 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=1.334;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:3,5,0:10,9,0:47:85,0,47,185,185,185:255,0,255:10,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,6,6,8:7,6,5,9 chr1 11839972 . G . PASS END=11839978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,945:0,62,255:23,0 chr1 11839979 . G . PASS END=11839979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr1 11839980 . C . PASS END=11839997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 11839998 . T C, 115.76 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,8,0:0,15,0:66:154,69,0,854,69,854:255,69,0:0,0:1.1576e+02,6.5761e+01,1.0354e-06,4.5000e+02,1.0053e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,13:0,0,13,10 chr1 11839999 . G . PASS END=11840000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11840001 . T . PASS END=11840009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11840010 . G . PASS END=11840010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11840011 . A . PASS END=11840017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 11840018 . C . PASS END=11840024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 11840025 . C . PASS END=11840035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 11840036 . T . PASS END=11840067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,44,255:17,0 chr1 11842246 . G . PASS END=11842266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:26,0 chr1 11842267 . A . PASS END=11842267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,840:0,47,255:25,0 chr1 11842268 . G . PASS END=11842273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 11842274 . G . PASS END=11842275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11842276 . C . PASS END=11842279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 11842280 . G . PASS END=11842295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1133:0,83,255:32,0 chr1 11842296 . C . PASS END=11842296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr1 11842297 . A . PASS END=11842322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1141:0,82,255:35,0 chr1 11842323 . A . PASS END=11842323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1218:0,75,255:32,0 chr1 11842324 . G . PASS END=11842352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1233:0,89,255:34,0 chr1 11842353 . T . PASS END=11842353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:27,0 chr1 11842354 . G . PASS END=11842366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 11842367 . G . PASS END=11842367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 11842368 . C . PASS END=11842368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11842369 . C . PASS END=11842380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,870:0,62,255:26,0 chr1 11842381 . T . PASS END=11842381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,766:0,47,255:23,0 chr1 11842382 . A . PASS END=11842390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 11844231 . C . PASS END=11844273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr1 11844274 . C . PASS END=11844292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 11844293 . C . PASS END=11844303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 11844304 . G . PASS END=11844304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 11844305 . G . PASS END=11844329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 11844330 . C T, 50.00 PASS DP=8;MQ=250.00;MQRankSum=2.017;ReadPosRankSum=1.368;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,4,0:0.500,0.000:8:2,3,0:2,1,0:48:85,0,50,143,143,286:131,0,131:4,0:5.0000e+01,6.5233e-05,5.3000e+01,1.4303e+02,1.7788e+02,2.8914e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,1,3:3,1,2,2 chr1 11844331 . G . PASS END=11844333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 11844334 . T . PASS END=11844334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr1 11844335 . T . PASS END=11844335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 11844336 . T . PASS END=11844367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 11844368 . C . PASS END=11844390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 11844391 . G . PASS END=11844394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 11844395 . A . PASS END=11844416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr1 11844417 . A . PASS END=11844453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 11844454 . A C, 43.22 PASS DP=6;MQ=250.00;MQRankSum=1.380;ReadPosRankSum=0.720;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,4,0:0.667,0.000:6:2,1,0:0,3,0:42:78,0,46,178,178,178:129,0,59:1,0:4.3221e+01,2.6793e-04,4.8526e+01,1.7799e+02,2.1276e+02,1.8100e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,2,0,4:0,2,3,1 chr1 11844455 . A . PASS END=11844456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr1 11844457 . A . PASS END=11844457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 11844458 . A . PASS END=11844467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 11844468 . C . PASS END=11844468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 11844469 . C . PASS END=11844482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,180:0,18,180:6,0 chr1 11844483 . A . PASS END=11844483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 11844484 . G . PASS END=11844486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 11844487 . T . PASS END=11844487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 11844488 . G . PASS END=11844491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 11844492 . A . PASS END=11844506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 11844507 . G . PASS END=11844507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:3,0 chr1 11844508 . C . PASS END=11844516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,202:6,0 chr1 11844517 . G . PASS END=11844529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 11844530 . C . PASS END=11844530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 11844531 . A . PASS END=11844538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 11844539 . G . PASS END=11844546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 11844547 . G . PASS END=11844547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 11844548 . C . PASS END=11844560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:13,0 chr1 11844561 . G . PASS END=11844563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11844564 . C . PASS END=11844564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 11844565 . T . PASS END=11844568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11844569 . C . PASS END=11844569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 11844570 . T . PASS END=11844586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,553:0,45,255:16,0 chr1 11844587 . G . PASS END=11844587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 11844588 . G . PASS END=11844632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,537:0,42,255:17,0 chr1 11844633 . C . PASS END=11844633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 11844634 . T . PASS END=11844645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 11844646 . G . PASS END=11844650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 11845205 . G . PASS END=11845205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 11845206 . G . PASS END=11845206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 11845207 . T . PASS END=11845224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,826:0,61,255:26,0 chr1 11845225 . A . PASS END=11845236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 11845237 . G . PASS END=11845237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 11845238 . C . PASS END=11845244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11845245 . G . PASS END=11845278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 11845279 . C . PASS END=11845283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 11845284 . C . PASS END=11845299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,909:0,64,255:26,0 chr1 11845300 . G . PASS END=11845300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 11845301 . G . PASS END=11845301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 11845302 . A . PASS END=11845327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,643:0,40,255:18,0 chr1 11845328 . A . PASS END=11845328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr1 11845329 . C . PASS END=11845331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11845332 . C . PASS END=11845332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 11845333 . C . PASS END=11845346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:17,0 chr1 11846248 . A . PASS END=11846248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1251:0,87,255:37,0 chr1 11847445 . A . PASS END=11847454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 11847455 . G . PASS END=11847455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 11847456 . C . PASS END=11847457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11847458 . G . PASS END=11847469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 11847470 . C . PASS END=11847471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11847472 . G . PASS END=11847473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11847474 . G . PASS END=11847509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,868:0,69,255:25,0 chr1 11847510 . G . PASS END=11847510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 11847511 . G . PASS END=11847538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 11847539 . C . PASS END=11847540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 11847541 . T . PASS END=11847550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,68,255:25,0 chr1 11847930 . G . PASS END=11847940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 11847941 . C . PASS END=11847959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 11847960 . T . PASS END=11847960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 11847961 . C . PASS END=11847977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 11847978 . G . PASS END=11848006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 11848007 . C . PASS END=11848007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 11848008 . T . PASS END=11848010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 11848011 . C . PASS END=11848011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 11848012 . C . PASS END=11848014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,737:0,57,255:19,0 chr1 11848015 . G . PASS END=11848033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 11848034 . C . PASS END=11848034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11848035 . C . PASS END=11848041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 11848042 . G . PASS END=11848044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 11848045 . C . PASS END=11848096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,829:0,69,255:23,0 chr1 11848097 . A . PASS END=11848106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 11848107 . A . PASS END=11848107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11848108 . A . PASS END=11848108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 11848206 . T . PASS END=11848231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:18,0 chr1 11848232 . A . PASS END=11848232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 11848233 . G . PASS END=11848233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11848234 . C . PASS END=11848234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 11848235 . A . PASS END=11848240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 11848241 . A . PASS END=11848242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 11848243 . G . PASS END=11848244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 11848245 . C . PASS END=11848245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 11848246 . C . PASS END=11848246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 11848247 . A . PASS END=11848247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 11848248 . T . PASS END=11848252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 11848253 . C . PASS END=11848253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 11848254 . T . PASS END=11848256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 11848257 . C . PASS END=11848257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 11848258 . C . PASS END=11848276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 11848277 . G . PASS END=11848277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 11848278 . T . PASS END=11848289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 11848290 . T . PASS END=11848290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 11848291 . G . PASS END=11848323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:17,0 chr1 11848324 . C . PASS END=11848324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 11848325 . C . PASS END=11848334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,499:0,45,255:15,0 chr1 11848335 . T . PASS END=11848335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,396:0,12,255:11,0 chr1 11848336 . G . PASS END=11848355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 11848356 . C . PASS END=11848358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 11848359 . A . PASS END=11848359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 11848360 . G . PASS END=11848361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 11848362 . A . PASS END=11848362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 11848363 . G . PASS END=11848366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11848367 . A . PASS END=11848367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 11848368 . G . PASS END=11848371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 11848372 . C . PASS END=11848372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:12,0 chr1 11848373 . C . PASS END=11848373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 11848374 . T . PASS END=11848382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 11848383 . C . PASS END=11848383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 11848384 . A . PASS END=11848384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 11848385 . T . PASS END=11848387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 11848388 . C . PASS END=11848426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 11848427 . C . PASS END=11848428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 11848429 . G . PASS END=11848435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 11848709 . C . PASS END=11848718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 11848719 . G . PASS END=11848719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 11848720 . G . PASS END=11848724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:24,0 chr1 11848725 . T . PASS END=11848725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 11848726 . G . PASS END=11848733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,876:0,61,255:26,0 chr1 11848734 . C . PASS END=11848739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 11848740 . A . PASS END=11848740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 11848741 . G . PASS END=11848742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 11848743 . C . PASS END=11848775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 11848776 . C . PASS END=11848798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 11848799 . G . PASS END=11848817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 11848818 . A . PASS END=11848841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,720:0,44,255:19,0 chr1 11848842 . C . PASS END=11848864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,674:0,57,255:19,0 chr1 11848865 . T . PASS END=11848865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 11848866 . C . PASS END=11848869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 11848870 . G . PASS END=11848875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:18:0,33,495:0,54,255:12,0 chr1 11848876 . G . PASS END=11848878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:15,0 chr1 11848879 . A G, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,13,0:0,7,0:57:145,60,0,773,60,773:255,60,0:0,0:1.0719e+02,5.7194e+01,8.2835e-06,4.5000e+02,9.1964e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,14:0,0,7,13 chr1 11848880 . C . PASS END=11848883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 11848884 . C . PASS END=11848916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 11848917 . C . PASS END=11848924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,498:0,31,255:13,0 chr1 11848925 . T . PASS END=11848931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:16,0 chr1 11848932 . G . PASS END=11848932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 11848933 . G . PASS END=11848933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 11848934 . G . PASS END=11848962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr1 11848963 . A . PASS END=11848963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 11848964 . G . PASS END=11849022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,536:0,45,255:17,0 chr1 11849023 . G . PASS END=11849025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr1 11849026 . C . PASS END=11849065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,529:0,42,255:16,0 chr1 11849066 . C . PASS END=11849077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,495:0,31,255:13,0 chr1 11849078 . C . PASS END=11849079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11849080 . C . PASS END=11849080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 11849081 . A . PASS END=11849081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11849082 . T . PASS END=11849088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 11849089 . C . PASS END=11849089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr1 11849090 . C . PASS END=11849100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 11849206 . G . PASS END=11849206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 11849327 . G . PASS END=11849327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 11849328 . C . PASS END=11849329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 11849330 . T . PASS END=11849352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,491:0,45,255:16,0 chr1 11849353 . G . PASS END=11849353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 11849354 . G . PASS END=11849395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,560:0,40,255:18,0 chr1 11849396 . C . PASS END=11849398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11849399 . T . PASS END=11849405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11849406 . A . PASS END=11849408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11849409 . C . PASS END=11849409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 11849410 . A . PASS END=11849412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11849413 . C . PASS END=11849428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 11849429 . A . PASS END=11849429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,697:0,47,255:19,0 chr1 11849430 . G . PASS END=11849430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11849431 . T . PASS END=11849431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 11849432 . G . PASS END=11849446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 11849447 . A G, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,12,0:0,11,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,12:0,0,12,11 chr1 11849448 . G . PASS END=11849459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 11849460 . G . PASS END=11849467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11849468 . C . PASS END=11849469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11849470 . T . PASS END=11849471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 11849472 . G . PASS END=11849474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11849475 . C . PASS END=11849484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,720:0,44,255:19,0 chr1 11849485 . G . PASS END=11849495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 11849496 . A . PASS END=11849496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 11849497 . G . PASS END=11849501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 11849502 . G . PASS END=11849509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 11849510 . C . PASS END=11849510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 11849511 . T . PASS END=11849511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11849512 . C . PASS END=11849512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 11849513 . A . PASS END=11849513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11849514 . T . PASS END=11849514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,419:0,11,255:11,0 chr1 11849515 . A . PASS END=11849515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 11849516 . G . PASS END=11849516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 11849719 . T . PASS END=11849719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 11850034 . C . PASS END=11850034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 11850364 . G . PASS END=11850364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 11850367 . T . PASS END=11850367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 11850562 . C . PASS END=11850562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1582:0,113,255:40,0 chr1 11850597 . C . PASS END=11850605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:41:0,107,1385:0,107,255:39,0 chr1 11850606 . A . PASS END=11850606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1377:0,73,255:37,0 chr1 11850607 . T . PASS END=11850611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:38,0 chr1 11850612 . A . PASS END=11850612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1325:0,51,255:32,0 chr1 11850613 . G . PASS END=11850628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1379:0,84,255:39,0 chr1 11850629 . C . PASS END=11850629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1441:0,76,255:37,0 chr1 11850630 . C . PASS END=11850647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,99,1449:0,101,255:38,0 chr1 11850648 . A . PASS END=11850648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:32,0 chr1 11850649 . A . PASS END=11850754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1181:0,81,255:38,0 chr1 11850755 . T . PASS END=11850755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1258:0,67,255:35,0 chr1 11850756 . C . PASS END=11850955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1144:0,88,255:40,0 chr1 11850968 . A . PASS END=11850968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 11851263 . C . PASS END=11851264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 11851265 . T . PASS END=11851265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,636:0,33,255:20,0 chr1 11851266 . T . PASS END=11851266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 11851267 . C . PASS END=11851269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 11851270 . G . PASS END=11851270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11851271 . A . PASS END=11851271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,648:0,27,255:20,0 chr1 11851272 . A . PASS END=11851273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11851274 . A . PASS END=11851274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 11851275 . T . PASS END=11851275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,593:0,18,255:19,0 chr1 11851276 . G . PASS END=11851276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 11851277 . A . PASS END=11851279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11851280 . C . PASS END=11851280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:18,0 chr1 11851281 . T . PASS END=11851289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,550:0,46,255:19,0 chr1 11851290 . C . PASS END=11851293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 11851294 . T . PASS END=11851295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr1 11851296 . C . PASS END=11851306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 11851307 . A . PASS END=11851307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,807:0,41,255:23,0 chr1 11851308 . T . PASS END=11851308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11851309 . G . PASS END=11851309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 11851310 . A . PASS END=11851310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 11851311 . T . PASS END=11851313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,691:0,39,255:22,0 chr1 11851314 . C . PASS END=11851314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 11851315 . T . PASS END=11851320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 11851321 . A . PASS END=11851321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:22,0 chr1 11851322 . G . PASS END=11851326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 11851327 . G . PASS END=11851327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,828:0,28,255:23,0 chr1 11851328 . A . PASS END=11851330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 11851331 . C . PASS END=11851331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 11851332 . C . PASS END=11851337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 11851338 . T . PASS END=11851338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,782:0,42,255:20,0 chr1 11851339 . G . PASS END=11851342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 11851343 . G . PASS END=11851343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,746:0,30,255:21,0 chr1 11851344 . C . PASS END=11851344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 11851345 . A . PASS END=11851345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 11851346 . T . PASS END=11851349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 11851350 . G . PASS END=11851350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:19,0 chr1 11851351 . C . PASS END=11851353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11851354 . C . PASS END=11851364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:17,0 chr1 11851365 . C . PASS END=11851365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,0 chr1 11851366 . A . PASS END=11851369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 11851370 . G . PASS END=11851379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 11851380 . C . PASS END=11851383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 11851785 . C . PASS END=11851797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 11851798 . T . PASS END=11851798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:20,0 chr1 11851799 . T . PASS END=11851802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 11852300 . C . PASS END=11852300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 11852333 . A . PASS END=11852333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 11852335 . C . PASS END=11852428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1083:0,88,255:40,0 chr1 11852429 . A . PASS END=11852429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 11852430 . A . PASS END=11852433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 11852434 . G . PASS END=11852436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11853962 . A . PASS END=11853962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 11853964 . C . PASS END=11853984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,574:0,41,255:19,0 chr1 11853985 . G . PASS END=11853996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 11853997 . G . PASS END=11853997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 11853998 . C . PASS END=11854000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 11854001 . A . PASS END=11854001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,750:0,50,255:21,0 chr1 11854002 . C . PASS END=11854012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,816:0,72,255:26,0 chr1 11854013 . G . PASS END=11854027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:29,0 chr1 11854028 . T . PASS END=11854038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,954:0,70,255:25,0 chr1 11854039 . C . PASS END=11854045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 11854046 . T . PASS END=11854046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,726:0,15,255:26,0 chr1 11854047 . T . PASS END=11854047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 11854048 . G . PASS END=11854050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 11854051 . G . PASS END=11854051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,927:0,70,255:28,0 chr1 11854052 . G . PASS END=11854055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1035:0,87,255:30,0 chr1 11854056 . G . PASS END=11854056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 11854057 . G . PASS END=11854072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1013:0,90,255:30,0 chr1 11854073 . A . PASS END=11854073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 11854074 . C . PASS END=11854082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 11854083 . G . PASS END=11854083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr1 11854084 . C . PASS END=11854086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1163:0,90,255:30,0 chr1 11854087 . C . PASS END=11854087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11854088 . T . PASS END=11854088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 11854089 . C . PASS END=11854098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:74:30:0,74,1062:0,74,255:26,0 chr1 11854099 . G . PASS END=11854100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 11854101 . T . PASS END=11854101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 11854102 . G . PASS END=11854103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 11854104 . T . PASS END=11854104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 11854105 . C . PASS END=11854123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 11854124 . T . PASS END=11854124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 11854125 . C . PASS END=11854127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11854128 . T . PASS END=11854128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 11854129 . C . PASS END=11854134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11854135 . C . PASS END=11854139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11854140 . A . PASS END=11854140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:24,0 chr1 11854141 . A . PASS END=11854146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:23,0 chr1 11854415 . T . PASS END=11854419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,928:0,84,255:28,0 chr1 11854420 . G . PASS END=11854437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:32,0 chr1 11854438 . C . PASS END=11854438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:29,0 chr1 11854439 . T . PASS END=11854456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1146:0,83,255:33,0 chr1 11854457 . G A, 151.88 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,35,0:1.000,0.000:35:0,16,0:0,19,0:102:190,105,0,1312,105,1312:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,11:0,0,17,18:11854457 chr1 11854458 . A . PASS END=11854475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:89:35:0,89,1215:0,89,255:36,0 chr1 11854476 . T G, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=2.172;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:17,21,0:0.553,0.000:38:10,6,0:7,15,0:48:85,0,49,743,600,1343:255,0,255:15,0:5.0000e+01,7.0410e-05,5.2087e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,11,10:8,9,10,11:11854457 chr1 11854477 . C . PASS END=11854513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:38:0,82,1451:0,82,255:40,2 chr1 11854514 . C . PASS END=11854560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,101,1449:0,101,255:40,0 chr1 11854561 . T . PASS END=11854561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 11854562 . C . PASS END=11854591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,87,255:35,0 chr1 11854592 . G . PASS END=11854596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1086:0,74,255:27,0 chr1 11854786 . C . PASS END=11854786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 11854787 . A . PASS END=11854881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1027:0,80,255:37,0 chr1 11854882 . C . PASS END=11854882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 11854883 . G . PASS END=11854885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 11854886 . T . PASS END=11854886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1084:0,41,255:26,0 chr1 11854887 . G . PASS END=11854891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:28,0 chr1 11854892 . G . PASS END=11854920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,68,255:26,0 chr1 11854926 . T . PASS END=11854926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 11855155 . C . PASS END=11855191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 11855192 . C . PASS END=11855217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,568:0,48,255:19,0 chr1 11855218 . A . PASS END=11855218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:16,0 chr1 11855219 . G . PASS END=11855220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 11855221 . G . PASS END=11855227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 11855228 . A . PASS END=11855228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 11855229 . G . PASS END=11855231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11855232 . G . PASS END=11855232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 11855233 . A . PASS END=11855240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,801:0,66,255:23,0 chr1 11855241 . C . PASS END=11855241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 11855242 . A . PASS END=11855251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,969:0,72,255:25,0 chr1 11855252 . T . PASS END=11855252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 11855253 . G . PASS END=11855278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,898:0,72,255:26,0 chr1 11855279 . C . PASS END=11855292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 11855293 . C . PASS END=11855297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 11855298 . G . PASS END=11855306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11855307 . G . PASS END=11855318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 11855319 . G . PASS END=11855327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 11855328 . T . PASS END=11855328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11855329 . G . PASS END=11855330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11855331 . C . PASS END=11855373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,986:0,67,255:26,0 chr1 11855374 . A . PASS END=11855374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 11855375 . G . PASS END=11855395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:22,0 chr1 11855396 . A . PASS END=11855405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,47,255:18,0 chr1 11856262 . C . PASS END=11856264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 11856265 . G . PASS END=11856265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr1 11856266 . G . PASS END=11856419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1233:0,102,255:40,0 chr1 11856420 . T . PASS END=11856420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:29,0 chr1 11856421 . C . PASS END=11856429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1260:0,90,255:29,0 chr1 11856430 . C . PASS END=11856454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 11856455 . A . PASS END=11856456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,775:0,50,255:19,0 chr1 11857788 . G . PASS END=11857788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 11860269 . C . PASS END=11860379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:35:0,96,1296:0,96,255:40,0 chr1 11861217 . C . PASS END=11861217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11861218 . C . PASS END=11861218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 11861219 . T . PASS END=11861234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 11861235 . A . PASS END=11861244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 11861245 . G . PASS END=11861245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 11861246 . G . PASS END=11861258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:19,0 chr1 11861259 . G . PASS END=11861259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 11861260 . C . PASS END=11861272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,615:0,43,255:19,0 chr1 11861273 . G . PASS END=11861279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 11861280 . A . PASS END=11861280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 11861281 . T . PASS END=11861304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 11861305 . A . PASS END=11861305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 11861306 . G . PASS END=11861313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,908:0,66,255:25,0 chr1 11861314 . G . PASS END=11861314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 11861315 . C . PASS END=11861375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,848:0,61,255:26,0 chr1 11861376 . T . PASS END=11861378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 11861379 . T . PASS END=11861379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 11861380 . T . PASS END=11861382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11861383 . C . PASS END=11861391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 11861392 . G . PASS END=11861393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 11861394 . T . PASS END=11861411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 11861412 . G . PASS END=11861412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11861413 . T . PASS END=11861417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 11861418 . T . PASS END=11861447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,584:0,47,255:19,0 chr1 11861448 . C . PASS END=11861448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 11861449 . G . PASS END=11861451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11861452 . C . PASS END=11861456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,519:0,31,255:12,0 chr1 11861458 . T . PASS END=11861458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 11862937 . C . PASS END=11862950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1166:0,83,255:33,0 chr1 11862951 . T . PASS END=11862951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:33,0 chr1 11862952 . G . PASS END=11862955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1138:0,88,255:34,0 chr1 11862956 . G . PASS END=11862956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1019:0,52,255:31,0 chr1 11862957 . C . PASS END=11862965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1254:0,105,255:36,0 chr1 11862966 . C . PASS END=11862966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr1 11862967 . A . PASS END=11863136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1305:0,95,255:40,0 chr1 11863137 . G . PASS END=11863137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:30,0 chr1 11863138 . G . PASS END=11863150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1233:0,86,255:31,0 chr1 11863151 . T . PASS END=11863171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 11863172 . A . PASS END=11863172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 11863173 . T . PASS END=11863177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 11863178 . G . PASS END=11863186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:18,0 chr1 11863462 . C . PASS END=11863501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 11863502 . G . PASS END=11863502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 11863503 . C . PASS END=11863508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 11863509 . C . LowGQ END=11863509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:9,0 chr1 11863510 . C . PASS END=11863520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 11863521 . C . PASS END=11863526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 11863527 . G . PASS END=11863530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 11863531 . T . PASS END=11863531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 11863532 . A . PASS END=11863563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 11863564 . T . PASS END=11863571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:6,0 chr1 11865993 . G . PASS END=11865993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 11866320 . A . PASS END=11866327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 11866328 . G . PASS END=11866333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11866334 . G . PASS END=11866334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 11866335 . G . PASS END=11866335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11866336 . G . PASS END=11866336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11866337 . G . PASS END=11866357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,886:0,66,255:26,0 chr1 11866358 . G . PASS END=11866358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 11866359 . T . PASS END=11866359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 11866360 . G . PASS END=11866366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 11866367 . C . PASS END=11866406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 11867188 . A . PASS END=11867247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,111,1665:0,122,255:40,0 chr1 11875903 . A . PASS END=11875968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,154,255:40,0 chr1 11876672 . A . PASS END=11876680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 11876681 . A . PASS END=11876681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 11876682 . G . PASS END=11876684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,986:0,81,255:31,0 chr1 11876685 . A . PASS END=11876685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 11876686 . T . PASS END=11876719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1009:0,93,255:33,0 chr1 11876720 . G . PASS END=11876737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:23,0 chr1 11879545 . G . PASS END=11879611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,105,1466:0,107,255:40,0 chr1 11880419 . A . PASS END=11880441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,216,255:40,0 chr1 11882752 . C . PASS END=11882753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 11882754 . G . PASS END=11882777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1001:0,84,255:32,0 chr1 11882778 . T . PASS END=11882778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 11882779 . G . PASS END=11882791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,99,1299:0,102,255:40,0 chr1 11882792 . T . PASS END=11882792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1250:0,73,255:36,0 chr1 11882793 . C . PASS END=11882858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1275:0,93,255:40,0 chr1 11883764 . C . PASS END=11883768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:38,0 chr1 11883769 . G . PASS END=11883802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1421:0,114,255:38,0 chr1 11883803 . T . PASS END=11883803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 11883804 . A . PASS END=11883886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1215:0,87,255:40,0 chr1 11883887 . G . PASS END=11883890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 11884543 . G . PASS END=11884545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 11884546 . T . PASS END=11884546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 11884547 . C . PASS END=11884554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:22,0 chr1 11884555 . A G, 112.75 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,10,0:0,12,0:63:151,66,0,813,66,813:255,66,0:0,0:1.1275e+02,6.2754e+01,2.3297e-06,4.5000e+02,9.7524e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,12:0,0,8,14 chr1 11884556 . G . PASS END=11884561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 11884562 . A . PASS END=11884562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 11884563 . G . PASS END=11884572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 11884573 . T . PASS END=11884573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 11884574 . C . PASS END=11884575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11884576 . A . PASS END=11884576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 11884577 . C . PASS END=11884577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11884578 . A . PASS END=11884579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 11884580 . T . PASS END=11884589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 11884590 . G . PASS END=11884590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 11884591 . T . PASS END=11884591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11884592 . G . PASS END=11884610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,684:0,57,255:19,0 chr1 11886213 . T . PASS END=11886271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,155,255:40,0 chr1 11887146 . A . PASS END=11887146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:28,0 chr1 11887147 . G . PASS END=11887162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1028:0,82,255:35,0 chr1 11887163 . T . PASS END=11887265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:35:0,86,1160:0,86,255:40,0 chr1 11887266 . C . PASS END=11887278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1249:0,89,255:34,0 chr1 11888163 . C . PASS END=11888163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 11888164 . T . PASS END=11888276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:31:0,82,1168:0,82,255:40,0 chr1 11888515 . T . PASS END=11888540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1121:0,80,255:33,0 chr1 11888541 . T . PASS END=11888541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1148:0,47,255:32,0 chr1 11888542 . C . PASS END=11888645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,95,255:40,0 chr1 11888646 . T . PASS END=11888677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 11888678 . T . PASS END=11888681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 11889253 . A . PASS END=11889253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 11889254 . G . PASS END=11889254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 11889255 . T . PASS END=11889255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr1 11889256 . C . PASS END=11889262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 11889263 . A . PASS END=11889263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:29,0 chr1 11889264 . G . PASS END=11889379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1164:0,83,255:39,1 chr1 11893572 . G . PASS END=11893695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:44:0,93,1590:0,93,255:40,2 chr1 11893934 . G . PASS END=11893951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,152,255:40,0 chr1 11893952 . C . PASS END=11893952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,11:75:13:75:0,13,1770:0,13,255:40,0 chr1 11893953 . T . PASS END=11894087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:58:0,120,1800:0,138,255:40,0 chr1 11894293 . C . PASS END=11894297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:88:35:0,88,1197:0,88,255:36,0 chr1 11894298 . T . PASS END=11894298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1226:0,78,255:35,0 chr1 11894299 . T . PASS END=11894411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1155:0,80,255:39,0 chr1 11894412 . A . PASS END=11894412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:27,0 chr1 11894413 . T . PASS END=11894416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 11894417 . A . PASS END=11894419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:26,0 chr1 11894420 . A . PASS END=11894431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1064:0,87,255:29,0 chr1 11894432 . C . PASS END=11894452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,939:0,71,255:26,0 chr1 11894541 . G . PASS END=11894647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:40:0,96,1478:0,96,255:40,0 chr1 11896024 . G . PASS END=11896029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 11896030 . A . PASS END=11896030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 11896031 . G . PASS END=11896041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 11896042 . C . PASS END=11896051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1094:0,84,255:30,0 chr1 11896052 . A . PASS END=11896053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 11896054 . C . PASS END=11896070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1127:0,83,255:34,0 chr1 11896071 . C . PASS END=11896071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:33,0 chr1 11896072 . G . PASS END=11896097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:35:0,96,1304:0,98,255:37,0 chr1 11896098 . G . PASS END=11896098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:31,0 chr1 11896099 . C . PASS END=11896144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1139:0,95,255:38,0 chr1 11896145 . A . PASS END=11896145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1002:0,66,255:33,0 chr1 11896146 . A . PASS END=11896159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:81:39:0,81,1263:0,81,255:39,0 chr1 11896160 . A . PASS END=11896160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1130:0,70,255:33,0 chr1 11896161 . A . PASS END=11896203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:31:0,84,1197:0,91,255:36,0 chr1 11896204 . G . PASS END=11896204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 11896205 . T . PASS END=11896210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 11897056 . A . PASS END=11897056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 11897057 . A . PASS END=11897064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 11897065 . A . PASS END=11897105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:61:21:0,61,661:0,61,255:26,0 chr1 11897106 . C . PASS END=11897109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11897110 . A . PASS END=11897111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 11897112 . G . PASS END=11897133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr1 11897134 . C . PASS END=11897135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11897136 . G . PASS END=11897136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:26,0 chr1 11897137 . A . PASS END=11897140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 11897141 . T . PASS END=11897151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 11897152 . C . PASS END=11897156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 11897157 . C . PASS END=11897199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,808:0,66,255:25,0 chr1 11897200 . A . PASS END=11897200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 11897201 . T . PASS END=11897208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 11897209 . A . PASS END=11897209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 11897210 . G . PASS END=11897211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 11897212 . A . PASS END=11897212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 11897213 . G . PASS END=11897213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 11897400 . A . PASS END=11897415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,623:0,54,255:19,0 chr1 11897416 . A . PASS END=11897429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr1 11897430 . C . PASS END=11897433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11897434 . T . PASS END=11897437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11897438 . C . PASS END=11897448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr1 11897449 . T . PASS END=11897449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr1 11897450 . G . PASS END=11897450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 11897451 . G . PASS END=11897485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1108:0,87,255:31,0 chr1 11897486 . A . PASS END=11897490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 11897491 . C . PASS END=11897491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11897492 . T . PASS END=11897492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 11897493 . G . PASS END=11897522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,68,255:26,0 chr1 11897523 . T . PASS END=11897523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 11897524 . G . PASS END=11897528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11897529 . A . PASS END=11897533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,759:0,47,255:19,0 chr1 11897534 . T . PASS END=11897539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11897540 . A . PASS END=11897540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 11897541 . C . PASS END=11897546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 11897547 . A . PASS END=11897554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 11897555 . C . PASS END=11897556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 11898392 . A . PASS END=11898392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 11898393 . G . PASS END=11898393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr1 11898394 . C . PASS END=11898475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,95,255:37,0 chr1 11898476 . C . PASS END=11898476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:30,0 chr1 11898477 . T . PASS END=11898484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr1 11898485 . C . PASS END=11898495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1086:0,74,255:26,0 chr1 11898496 . C . PASS END=11898496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11898497 . G . PASS END=11898497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 11898498 . T . PASS END=11898499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 11898592 . G . PASS END=11898592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 11898593 . A . PASS END=11898662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:31:0,84,1136:0,88,255:35,0 chr1 11898663 . C . PASS END=11898663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 11898664 . C . PASS END=11898665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 11898666 . G . PASS END=11898670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 11898671 . G . PASS END=11898671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11898672 . A . PASS END=11898707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:26,0 chr1 11898708 . T . PASS END=11898753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,554:0,40,255:18,0 chr1 11898754 . G . PASS END=11898754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 11898755 . A . PASS END=11898770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:17,0 chr1 11898771 . G . PASS END=11898771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:16,0 chr1 11898772 . T . PASS END=11898776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr1 11898777 . T . PASS END=11898778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:17,0 chr1 11898779 . T . PASS END=11898811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr1 11898812 . A . PASS END=11898835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,544:0,48,255:19,0 chr1 11898836 . G . PASS END=11898848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 11898849 . T G, 127.80 PASS DP=27;MQ=249.96;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,17,0:0,10,0:78:166,81,0,1014,81,1014:255,81,0:0,0:1.2780e+02,7.7802e+01,0.0000e+00,4.5000e+02,1.1257e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,14:0,0,19,8 chr1 11898850 . T . PASS END=11898869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 11898870 . G . PASS END=11898870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr1 11898871 . T . PASS END=11898886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:26,0 chr1 11898887 . T . PASS END=11898893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,925:0,62,255:25,0 chr1 11898894 . C . PASS END=11898894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 11898895 . C . PASS END=11898897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 11898898 . C . PASS END=11898899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 11898900 . A . PASS END=11898913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 11898914 . G . PASS END=11898915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 11898916 . G . PASS END=11898917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 11898918 . C . PASS END=11898918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 11898919 . C . PASS END=11898924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,864:0,72,255:24,0 chr1 11898925 . G . PASS END=11898925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr1 11898926 . C . PASS END=11898942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:25,0 chr1 11898943 . A . PASS END=11898943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 11898944 . G . PASS END=11898947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr1 11898948 . C . PASS END=11898949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 11898950 . C . PASS END=11898972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,68,255:22,0 chr1 11898973 . C . PASS END=11898974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,853:0,56,255:22,0 chr1 11898975 . T . PASS END=11898993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,787:0,66,255:23,0 chr1 11898994 . C . PASS END=11899019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,552:0,48,255:19,0 chr1 11899020 . C . PASS END=11899020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 11899021 . C . PASS END=11899023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 11899024 . C . PASS END=11899026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:12,0 chr1 11899027 . C . PASS END=11899027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:11,0 chr1 11899028 . G . PASS END=11899050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:12,0 chr1 11900200 . A . PASS END=11900273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1155:0,80,255:36,0 chr1 11900274 . C . PASS END=11900274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 11900275 . A . PASS END=11900275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 11900276 . T . PASS END=11900276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1043:0,62,255:29,0 chr1 11900277 . C . PASS END=11900280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 11906060 . T . PASS END=11906067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,128,255:40,0 chr1 11906068 . A G, 188.00 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,15,0:0,32,0:138:226,141,0,1794,141,1794:255,141,0:0,0:1.8800e+02,1.3800e+02,0.0000e+00,4.5000e+02,1.7277e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,19:0,0,24,23 chr1 11906069 . G . PASS END=11906071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,138,255:40,0 chr1 11907170 . C . PASS END=11907178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 11907179 . G . PASS END=11907193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:8,0 chr1 11907194 . G . PASS END=11907225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 11907226 . C . PASS END=11907230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 11907231 . C . PASS END=11907255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:13,0 chr1 11907256 . G . PASS END=11907295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 11907296 . A . PASS END=11907296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 11907297 . G . PASS END=11907298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 11907299 . T . PASS END=11907300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11907301 . G . PASS END=11907333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:17,0 chr1 11907334 . C . PASS END=11907343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 11907344 . T . PASS END=11907353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr1 11907354 . G . PASS END=11907354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 11907355 . G . PASS END=11907381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:17,0 chr1 11907382 . C . PASS END=11907382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:14,0 chr1 11907383 . C . PASS END=11907419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 11907420 . T . PASS END=11907420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 11907421 . T . PASS END=11907424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 11907425 . C . PASS END=11907425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 11907426 . T . PASS END=11907433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 11907434 . C . PASS END=11907435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11907436 . C . PASS END=11907483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:19,0 chr1 11907484 . G . PASS END=11907494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:12,0 chr1 11907495 . T . PASS END=11907496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 11907619 . C . PASS END=11907619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 11907620 . T . PASS END=11907620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 11907621 . T . PASS END=11907629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,92,255:31,0 chr1 11907630 . T . PASS END=11907630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 11907631 . C . PASS END=11907640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:36,0 chr1 11907641 . T . PASS END=11907730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:36:0,102,1364:0,108,255:40,0 chr1 11907731 . A . PASS END=11907731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1303:0,62,255:33,0 chr1 11907732 . A . PASS END=11907739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,101,255:33,0 chr1 11907740 . A . PASS END=11907740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:30,0 chr1 11907741 . T . PASS END=11907741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 11917712 . T . PASS END=11917728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1319:0,105,255:35,0 chr1 11918271 . C . PASS END=11918293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:19,0 chr1 11918294 . G . PASS END=11918333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:24,0 chr1 11918334 . C . PASS END=11918334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 11918335 . T . PASS END=11918339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 11918340 . C . PASS END=11918349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 11918350 . G . PASS END=11918355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 11918356 . T . PASS END=11918424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:18:0,40,630:0,40,255:19,0 chr1 11918425 . C . PASS END=11918434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:22,0 chr1 11918435 . C . PASS END=11918435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 11918436 . C . PASS END=11918449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 11918450 . C . PASS END=11918451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 11918452 . C . PASS END=11918457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 11918458 . G . PASS END=11918458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:21,0 chr1 11918459 . A . PASS END=11918460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 11918461 . G . PASS END=11918461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:21,0 chr1 11918462 . G . PASS END=11918489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 11918490 . G . PASS END=11918526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,488:0,43,255:19,0 chr1 11918759 . C . PASS END=11918872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1168:0,84,255:40,0 chr1 11918873 . T . PASS END=11918878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:32:0,63,945:0,63,255:26,0 chr1 11918879 . C . PASS END=11918889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:21:0,51,765:0,51,255:19,0 chr1 11918890 . T . PASS END=11918890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:12,0 chr1 11980372 . T . PASS END=11980389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,131,255:40,0 chr1 11982576 . T . PASS END=11982578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 11982579 . G . PASS END=11982581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:29,0 chr1 11982582 . C . PASS END=11982588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:31,0 chr1 11982589 . T . PASS END=11982589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 11982590 . C . PASS END=11982603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1263:0,86,255:32,0 chr1 11982604 . A . PASS END=11982604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:31,0 chr1 11982605 . C . PASS END=11982848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1155:0,80,255:40,0 chr1 11982849 . C . PASS END=11982851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11982852 . G . PASS END=11982853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11982854 . T . PASS END=11982854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:24,0 chr1 11982855 . G . PASS END=11982857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:29:0,60,1067:0,60,255:26,0 chr1 11982858 . C . PASS END=11982859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 11982860 . T . PASS END=11982863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 11982864 . G . PASS END=11982866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 11982867 . C . PASS END=11982940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,864:0,62,255:26,0 chr1 11982941 . C . PASS END=11982943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 11982944 . T . PASS END=11982944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 11982945 . G . PASS END=11982945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 11982946 . A . PASS END=11983011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 11983012 . C . PASS END=11983025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,682:0,44,255:19,0 chr1 11983026 . G . PASS END=11983028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 11983029 . A . PASS END=11983040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 11983041 . G . PASS END=11983044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 11983045 . T . PASS END=11983045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 11983046 . C . PASS END=11983054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:26,0 chr1 11983055 . C . PASS END=11983068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 11983069 . T . PASS END=11983069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1041:0,62,255:28,0 chr1 11983070 . T . PASS END=11983073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11983074 . C . PASS END=11983077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11983078 . G . PASS END=11983078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 11983079 . C . PASS END=11983082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 11983083 . C . PASS END=11983122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,882:0,62,255:26,0 chr1 11983123 . A . PASS END=11983168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1149:0,84,255:38,0 chr1 11983169 . G . PASS END=11983205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1242:0,91,255:37,0 chr1 11983206 . A G, 140.45 PASS DP=34;MQ=40.28;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,17,0:0,17,0:99:178,102,0,1310,102,1310:255,102,0:0,0:1.4045e+02,9.9328e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,18:0,0,17,17 chr1 11983207 . A . PASS END=11983210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:31,0 chr1 11983211 . T . PASS END=11983211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr1 11983212 . G . PASS END=11983213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1180:0,93,255:31,0 chr1 11983214 . G . PASS END=11983214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 11983215 . C . PASS END=11983243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1080:0,87,255:30,0 chr1 11983244 . C . PASS END=11983248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 11983249 . T . PASS END=11983261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:25,0 chr1 11983262 . T . PASS END=11983262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 11983263 . G . PASS END=11983284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 11983285 . A . PASS END=11983287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr1 11983288 . C . PASS END=11983302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,64,255:23,0 chr1 11983303 . A . PASS END=11983303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr1 11983304 . G . PASS END=11983310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 11983311 . G . PASS END=11983311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 11983312 . A . PASS END=11983323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 11983324 . G . PASS END=11983324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 11983325 . A . PASS END=11983329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 11983330 . A . PASS END=11983330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 11983331 . G . PASS END=11983331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 11983332 . C . PASS END=11983332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 11983333 . C . PASS END=11983338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:21,0 chr1 11983339 . G . PASS END=11983340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 11983341 . C . PASS END=11983344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr1 11983345 . A . PASS END=11983346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 11983347 . G . PASS END=11983352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,689:0,66,255:22,0 chr1 11983353 . G . PASS END=11983353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 11983354 . G . PASS END=11983364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 11983365 . G . PASS END=11983365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 11983366 . G . PASS END=11983381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,876:0,72,255:24,0 chr1 11983382 . A . PASS END=11983382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 11983383 . G . PASS END=11983383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 11983384 . T . PASS END=11983384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 11983385 . G . PASS END=11983385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 11983386 . A . PASS END=11983396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr1 11983397 . T . PASS END=11983397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 11983398 . G . PASS END=11983399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 11983400 . G . PASS END=11983400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 11983401 . C . PASS END=11983491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 11983492 . T . PASS END=11983492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,610:0,49,255:20,0 chr1 11983493 . T . PASS END=11983500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 11983501 . A . PASS END=11983526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,512:0,42,255:19,0 chr1 11983527 . G . PASS END=11983533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 11983534 . T . PASS END=11983536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 11983537 . A . PASS END=11983546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 11985262 . C . PASS END=11985283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 11985284 . G . PASS END=11985306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:25,0 chr1 11985307 . G . PASS END=11985308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 11985309 . T . PASS END=11985309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 11985310 . C . PASS END=11985329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:32,0 chr1 11985330 . A . PASS END=11985330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,954:0,46,255:28,0 chr1 11985331 . G . PASS END=11985440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1164:0,83,255:40,0 chr1 11985441 . A . PASS END=11985458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:25,0 chr1 11985459 . G . PASS END=11985459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 11985460 . T . PASS END=11985477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 11985478 . G . PASS END=11985482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 11985483 . T . PASS END=11985505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 11985506 . C . PASS END=11985528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 11985529 . T . PASS END=11985530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 11985531 . G . PASS END=11985534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11985535 . T . PASS END=11985549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 11985550 . C . PASS END=11985553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 11985554 . G . PASS END=11985564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 11985565 . A . PASS END=11985565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 11985566 . C . PASS END=11985571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 11985572 . G . PASS END=11985583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 11985584 . C . PASS END=11985600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 11985601 . A . PASS END=11985601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 11985602 . G . PASS END=11985608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 11985609 . G . PASS END=11985640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 11985641 . C . PASS END=11985686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 11985687 . A . PASS END=11985695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 11985696 . T . PASS END=11985703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 11985704 . G . PASS END=11985706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 11985707 . C . PASS END=11985707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr1 11985708 . C . PASS END=11985708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11985709 . T . PASS END=11985709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 11985710 . G . PASS END=11985711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 11985712 . G . PASS END=11985712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 11985713 . C . PASS END=11985726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,527:0,45,255:17,0 chr1 11985727 . C . PASS END=11985727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 11985728 . T . PASS END=11985732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 11985733 . G . PASS END=11985733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 11985734 . C . PASS END=11985751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,653:0,51,255:19,0 chr1 11985752 . G . PASS END=11985752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 11985753 . G . PASS END=11985766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr1 11985767 . G . PASS END=11985769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 11985770 . A . PASS END=11985809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,615:0,41,255:19,0 chr1 11985810 . G . PASS END=11985815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 11985816 . G . PASS END=11985816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 11985817 . G . PASS END=11985822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 11985823 . C . PASS END=11985825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 11985826 . G . PASS END=11985852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,808:0,62,255:26,0 chr1 11985853 . G . PASS END=11985863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr1 11985864 . A . PASS END=11985866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1108:0,74,255:26,0 chr1 11985867 . A . PASS END=11985867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 11985868 . G . PASS END=11985888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 11985889 . C . PASS END=11985890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 11985891 . G . PASS END=11985897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 11985898 . C . PASS END=11985908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 11985909 . C . PASS END=11985912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 11985913 . G . PASS END=11985953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1073:0,90,255:31,0 chr1 11985954 . C . PASS END=11985957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 11985958 . C . PASS END=11985973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:32,0 chr1 11985974 . C . PASS END=11985974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 11985975 . A . PASS END=11986026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1163:0,87,255:32,0 chr1 11986027 . G . PASS END=11986042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:24:0,63,945:0,72,255:24,0 chr1 11986043 . C . PASS END=11986058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:18,0 chr1 11986059 . C . PASS END=11986060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 11986061 . C . PASS END=11986061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 11986062 . T . PASS END=11986064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11986065 . C . PASS END=11986066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 11986067 . C . PASS END=11986067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 11986068 . A . PASS END=11986076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 11986077 . C . PASS END=11986089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:12,0 chr1 11986090 . C . PASS END=11986128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 11986129 . C . PASS END=11986130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 11986131 . C . PASS END=11986134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 11986135 . G . PASS END=11986141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 11986142 . G . PASS END=11986145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 11986146 . A . PASS END=11986148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr1 11986149 . A . PASS END=11986150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,255:3,0 chr1 11986151 . G . PASS END=11986161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:4:0,12,147:0,12,147:4,0 chr1 11986162 . C . LowGQ END=11986162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 11986163 . C . PASS END=11986199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 11986200 . A . LowGQ END=11986200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 11986201 . G . PASS END=11986219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 11986220 . C . LowGQ END=11986277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,6,78:3,0 chr1 11986278 . C . LowDepth;LowGQ END=11986294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 11994760 . G . PASS END=11994760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 11994773 . C . PASS END=11994773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 11994776 . C . PASS END=11994776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 11994779 . G . PASS END=11994779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 11994798 . G . PASS END=11994798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 11994823 . C . PASS END=11994823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 11994837 . A . PASS END=11994912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:44:0,86,1629:0,86,255:40,0 chr1 12004579 . C . PASS END=12004580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 12004581 . C . PASS END=12004581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 12004582 . C . PASS END=12004583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 12004584 . T . PASS END=12004584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 12004585 . G . PASS END=12004593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 12004594 . A . PASS END=12004594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:15,0 chr1 12004595 . G . PASS END=12004601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 12004602 . A . PASS END=12004602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 12004603 . G . PASS END=12004635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:19,0 chr1 12004636 . G . PASS END=12004641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,681:0,63,255:22,0 chr1 12004642 . T . PASS END=12004642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 12004643 . C . PASS END=12004653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 12004654 . C . PASS END=12004654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 12004655 . A . PASS END=12004660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 12004661 . T . PASS END=12004682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,50,255:19,0 chr1 12004683 . G . PASS END=12004709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 12004710 . C . PASS END=12004719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 12008033 . A . PASS END=12008046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:23,0 chr1 12008047 . C . PASS END=12008047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 12008048 . T . PASS END=12008056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:25,0 chr1 12008057 . C . PASS END=12008061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 12008062 . A . PASS END=12008062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 12008063 . A . PASS END=12008078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 12008079 . C . PASS END=12008079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12008080 . C . PASS END=12008081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12008082 . T . PASS END=12008118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,856:0,61,255:26,0 chr1 12008119 . A . PASS END=12008119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 12008120 . T . PASS END=12008124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 12009819 . T . PASS END=12009819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1045:0,84,255:28,0 chr1 12009830 . G . PASS END=12009917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:86:31:0,86,1157:0,86,255:40,0 chr1 12009918 . A . PASS END=12009954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,120,1800:0,123,255:40,0 chr1 12009955 . C T, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,22,0:0,19,0:120:208,123,0,1590,123,1590:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,21:0,0,21,20 chr1 12009956 . G . PASS END=12009963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:39,0 chr1 12009968 . G . PASS END=12009968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:33,0 chr1 12010404 . C . PASS END=12010404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 12010414 . C . PASS END=12010419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 12010420 . C . PASS END=12010420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:23,0 chr1 12010421 . G . PASS END=12010426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:25,0 chr1 12010427 . T . PASS END=12010427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 12010428 . T . PASS END=12010430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 12010431 . C . PASS END=12010441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:29,0 chr1 12010442 . C . PASS END=12010443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 12010444 . G . PASS END=12010481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1233:0,87,255:33,0 chr1 12010482 . T . PASS END=12010483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:31,0 chr1 12010484 . G . PASS END=12010507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1189:0,88,255:33,0 chr1 12010508 . T . PASS END=12010508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:30,0 chr1 12010509 . A . PASS END=12010524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 12010525 . G . PASS END=12010525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:25,0 chr1 12010526 . G . PASS END=12010552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 12010553 . G . PASS END=12010563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 12010564 . C . PASS END=12010565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 12010566 . T . PASS END=12010577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr1 12012680 . G . PASS END=12012742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,915:0,80,255:33,0 chr1 12012743 . A . PASS END=12012765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:25:0,64,917:0,64,255:26,0 chr1 12012766 . A . PASS END=12012766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 12012767 . A . PASS END=12012772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 12012773 . T . PASS END=12012773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,791:0,45,255:23,0 chr1 12012774 . C . PASS END=12012793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 12012795 . A . PASS END=12012795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 12012802 . A . PASS END=12012802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 12014887 . G . PASS END=12014887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 12014888 . A . PASS END=12014888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:29,0 chr1 12014889 . G . PASS END=12014890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12014891 . A . PASS END=12014891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 12014892 . G . PASS END=12014894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1208:0,83,255:32,0 chr1 12014895 . C . PASS END=12014895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:30,0 chr1 12014896 . A . PASS END=12014950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1303:0,84,255:40,0 chr1 12016974 . A . PASS END=12016978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 12016979 . G . PASS END=12016979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 12016980 . T . PASS END=12017032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:30:0,82,1041:0,82,255:37,0 chr1 12017033 . A . PASS END=12017036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 12017037 . T . PASS END=12017051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr1 12017052 . A . PASS END=12017058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 12017059 . C . PASS END=12017059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:23,0 chr1 12017060 . G . PASS END=12017071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 12017075 . G . PASS END=12017075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 12017147 . T . PASS END=12017159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,861:0,68,255:24,0 chr1 12017160 . C . PASS END=12017160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 12017161 . C . PASS END=12017174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:27,0 chr1 12017175 . T . PASS END=12017179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 12017180 . C . PASS END=12017211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 12017212 . T . PASS END=12017214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12017215 . G . PASS END=12017215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 12017216 . A . PASS END=12017217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12017218 . C . PASS END=12017232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,902:0,64,255:26,0 chr1 12017233 . T . PASS END=12017233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:23,0 chr1 12017234 . C . PASS END=12017238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 12017239 . C . PASS END=12017239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 12017240 . C . PASS END=12017250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr1 12017890 . C . PASS END=12017890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 12017893 . C . PASS END=12017893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 12017899 . C . PASS END=12017991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:37:0,84,1260:0,98,255:40,0 chr1 12017992 . G . PASS END=12017992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:29,0 chr1 12017993 . G . PASS END=12017993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 12017994 . C . PASS END=12017994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:29,0 chr1 12017995 . A . PASS END=12018000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,88,255:31,0 chr1 12018567 . G . PASS END=12018567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 12018573 . G . PASS END=12018583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:19,0 chr1 12018584 . G . PASS END=12018615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:25,0 chr1 12018616 . A . PASS END=12018616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 12018617 . G . PASS END=12018631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,813:0,75,255:26,0 chr1 12018632 . G . PASS END=12018645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 12018646 . A . PASS END=12018694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 12018695 . C . PASS END=12018695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 12018696 . C . PASS END=12018704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 12020697 . C . PASS END=12020697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 12020703 . G . PASS END=12020707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 12020708 . G . PASS END=12020709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 12020710 . A . PASS END=12020710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 12020711 . C . PASS END=12020712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 12020713 . A . PASS END=12020713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 12020714 . C . PASS END=12020716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 12020717 . G . PASS END=12020720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 12020721 . C . PASS END=12020721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 12020722 . A . PASS END=12020722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 12020723 . G . PASS END=12020723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 12020724 . G . PASS END=12020731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,329:0,33,255:11,0 chr1 12020732 . G . PASS END=12020732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 12020733 . T . PASS END=12020739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 12020740 . C . PASS END=12020740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 12020741 . A . PASS END=12020744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:14:0,31,543:0,31,255:14,0 chr1 12020745 . C . PASS END=12020751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 12020752 . G . PASS END=12020752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 12020753 . C . PASS END=12020757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 12020758 . A . PASS END=12020758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr1 12020759 . C . PASS END=12020765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 12020766 . G . PASS END=12020766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 12020767 . T . PASS END=12020769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 12020770 . A . PASS END=12020770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 12020771 . G . PASS END=12020774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 12020775 . G . PASS END=12020775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 12020776 . T . PASS END=12020825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 12020827 . G . PASS END=12020827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 12023586 . C . PASS END=12023586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 12023589 . A . PASS END=12023589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 12023590 . G . PASS END=12023616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:24,0 chr1 12023617 . A . PASS END=12023617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 12023618 . C . PASS END=12023635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr1 12023636 . A . PASS END=12023637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 12023638 . G . PASS END=12023640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12023641 . G . PASS END=12023644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12023645 . T . PASS END=12023693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:26,0 chr1 12023696 . G . PASS END=12023696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 12024229 . C . PASS END=12024229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 12024232 . G . PASS END=12024234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1394:0,98,255:38,0 chr1 12024235 . C T, 160.91 PASS DP=41;MQ=250.00;FractionInformativeReads=0.927 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,29,0:0,9,0:111:199,114,0,1444,114,1444:255,117,0:0,0:1.6091e+02,1.1091e+02,0.0000e+00,4.5000e+02,1.4568e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,13:0,0,18,20 chr1 12024236 . G . PASS END=12024272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:39:0,81,1390:0,81,255:40,0 chr1 12024273 . G . PASS END=12024274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1623:0,119,255:40,0 chr1 12024275 . T . PASS END=12024275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1545:0,66,255:40,0 chr1 12024276 . C . PASS END=12024292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:45:0,85,1509:0,85,255:40,2 chr1 12024293 . C . PASS END=12024293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1596:0,69,255:40,0 chr1 12024294 . T . PASS END=12024307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:47:0,81,1676:0,81,255:40,0 chr1 12024308 . T . PASS END=12024308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1651:0,75,255:40,0 chr1 12024309 . A . PASS END=12024319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:86:46:0,86,1627:0,86,255:40,0 chr1 12024320 . T . PASS END=12024320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:43:46:0,43,1445:0,43,255:38,0 chr1 12024321 . C . PASS END=12024323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:86:45:0,86,1541:0,86,255:40,0 chr1 12024324 . A . PASS END=12024324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1520:0,71,255:36,0 chr1 12024325 . G . PASS END=12024327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,105,1667:0,105,255:39,0 chr1 12024328 . C . PASS END=12024328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:72:45:0,72,1557:0,72,255:33,0 chr1 12024329 . T . PASS END=12024330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1566:0,102,255:34,0 chr1 12024331 . C . PASS END=12024331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:41:45:0,41,1451:0,41,255:35,0 chr1 12024332 . G . PASS END=12024332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,114,1710:0,135,255:38,0 chr1 12024333 . T . PASS END=12024333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:41:45:0,41,1322:0,41,255:35,0 chr1 12024334 . G . PASS END=12024334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,105,1575:0,119,255:34,0 chr1 12024335 . G . PASS END=12024335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:55:45:0,55,1487:0,55,255:31,0 chr1 12024336 . A . PASS END=12024337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,99,1490:0,99,255:34,0 chr1 12024338 . A . PASS END=12024338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:51:43:0,51,1337:0,51,255:32,0 chr1 12024339 . T . PASS END=12024341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,117,255:30,0 chr1 12024342 . T . PASS END=12024342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1217:0,45,255:27,0 chr1 12024343 . G . PASS END=12024344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1260:0,100,255:29,0 chr1 12024345 . A . LowGQ END=12024345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:0:36:0,0,1086:3,0,255:21,0 chr1 12024346 . G . PASS END=12024349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,89,255:25,0 chr1 12024350 . C . LowGQ END=12024350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,762:21,0,255:19,0 chr1 12024351 . G . PASS END=12024352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 12024353 . C . LowGQ END=12024353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,829:21,0,255:18,0 chr1 12024354 . G . PASS END=12024354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:30:0,66,990:0,73,255:21,0 chr1 12024355 . T . PASS END=12024355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,823:0,15,255:19,0 chr1 12024356 . G . PASS END=12024356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,70,255:21,0 chr1 12024357 . T . LowGQ END=12024357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,619:38,0,255:18,0 chr1 12024700 . G . PASS END=12024700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 12024701 . T . PASS END=12024819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1157:0,87,255:40,0 chr1 12024820 . T . PASS END=12024842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:25:0,62,945:0,62,255:26,0 chr1 12024844 . T . PASS END=12024844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 12024847 . G . PASS END=12024847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 12025535 . A . PASS END=12025535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 12025537 . G . PASS END=12025541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 12025542 . G . PASS END=12025542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 12025543 . T . PASS END=12025630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1131:0,80,255:39,0 chr1 12025631 . A . PASS END=12025650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 12025660 . G . PASS END=12025660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 12026308 . G . PASS END=12026322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr1 12026323 . T . PASS END=12026323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 12026324 . A . PASS END=12026373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1155:0,80,255:34,0 chr1 12027041 . C . PASS END=12027042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr1 12027044 . C . PASS END=12027148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:34:0,82,1205:0,82,255:40,0 chr1 12030727 . G . PASS END=12030873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,108,1620:0,129,255:40,0 chr1 12030876 . G . PASS END=12030876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr1 12030882 . G . PASS END=12030882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr1 12032927 . A . PASS END=12032927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 12032929 . G . PASS END=12033019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:46:0,92,1610:0,92,255:40,0 chr1 12033020 . A . PASS END=12033020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1430:0,77,255:38,0 chr1 12033021 . C . PASS END=12033051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1260:0,92,255:40,0 chr1 12033052 . G . PASS END=12033052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1219:0,69,255:27,0 chr1 12033053 . A . PASS END=12033054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 12034704 . T . PASS END=12034704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 12034710 . G . PASS END=12034710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 12034711 . G . LowGQ END=12034713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:5,0,255:10,1 chr1 12034714 . G . PASS END=12034730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,390:0,36,255:13,0 chr1 12034731 . C . PASS END=12034746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 12034747 . T . PASS END=12034757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:21,0 chr1 12034758 . A . PASS END=12034759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 12034760 . G . PASS END=12034778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,754:0,63,255:26,0 chr1 12034779 . C . PASS END=12034798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 12034799 . T . PASS END=12034812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr1 12034813 . T . PASS END=12034813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 12034814 . C . PASS END=12034835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 12034836 . T . PASS END=12034836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 12034837 . A . PASS END=12034843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 12034844 . A . PASS END=12034863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,676:0,54,255:18,0 chr1 12034864 . A . PASS END=12034864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 12034865 . A . PASS END=12034865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 12034869 . G . PASS END=12034869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 12034926 . T . PASS END=12034926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 12034982 . A . PASS END=12034982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 12034993 . A . PASS END=12034993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 12035013 . C . PASS END=12035013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 12035141 . T . PASS END=12035141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 12035173 . C . PASS END=12035173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 12035284 . C . PASS END=12035284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 12035326 . G . PASS END=12035326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 12035393 . G . PASS END=12035393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:33,0 chr1 12035586 . T . PASS END=12035586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 12040223 . G . PASS END=12040223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 12040309 . G . PASS END=12040309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 12040332 . C . PASS END=12040332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 12040347 . C . PASS END=12040347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 12040363 . T . PASS END=12040363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 12040474 . C . PASS END=12040474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 12040545 . A . PASS END=12040545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 12049226 . A . PASS END=12049370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1219:0,81,255:40,0 chr1 12049371 . A . PASS END=12049382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr1 12049383 . G . PASS END=12049383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 12049384 . C . PASS END=12049390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 12049391 . T . PASS END=12049400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:19,0 chr1 12049409 . G . PASS END=12049409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 12052336 . G . PASS END=12052343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,119,1651:0,119,255:40,0 chr1 12052609 . C . PASS END=12052609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 12052612 . A . PASS END=12052748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:43:0,90,1484:0,90,255:40,0 chr1 12052752 . G . PASS END=12052752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:43:0,84,1260:0,129,255:28,0 chr1 12056213 . G . PASS END=12056217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 12056218 . G . PASS END=12056218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 12056219 . C . PASS END=12056220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 12056221 . A . PASS END=12056221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:29,0 chr1 12056222 . T . PASS END=12056343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1105:0,82,255:39,0 chr1 12056344 . C . PASS END=12056344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:33,0 chr1 12056345 . C . PASS END=12056362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1139:0,80,255:31,0 chr1 12056363 . G . PASS END=12056373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 12056374 . A . PASS END=12056374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:20,0 chr1 12056375 . G . PASS END=12056375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 12056379 . A . PASS END=12056379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 12057352 . A . PASS END=12057440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:37:0,88,1291:0,88,255:40,0 chr1 12057441 . T . PASS END=12057441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:35,0 chr1 12057442 . G . PASS END=12057457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,98,255:36,0 chr1 12057458 . T . PASS END=12057458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1202:0,58,255:30,0 chr1 12057459 . G . PASS END=12057465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1172:0,85,255:31,0 chr1 12057466 . T . PASS END=12057468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 12057469 . T . PASS END=12057469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 12057470 . G . PASS END=12057476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr1 12057477 . A . PASS END=12057478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 12058817 . T . PASS END=12058817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 12058827 . C . PASS END=12058936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,111,1665:0,111,255:40,0 chr1 12058939 . A . PASS END=12058939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,114,1710:0,127,255:37,0 chr1 12059045 . G . PASS END=12059152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1219:0,93,255:40,0 chr1 12061458 . G . PASS END=12061466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 12061467 . C . PASS END=12061469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 12061470 . C . PASS END=12061470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 12061471 . A . PASS END=12061484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1025:0,83,255:33,0 chr1 12061485 . A . PASS END=12061485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:32,0 chr1 12061486 . C . PASS END=12061492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1205:0,89,255:36,0 chr1 12061493 . C . PASS END=12061494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:64:37:0,64,1279:0,64,255:36,1 chr1 12061495 . T . PASS END=12061495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:38:0,80,1392:0,80,255:37,1 chr1 12061496 . G . PASS END=12061496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 12061497 . G . PASS END=12061497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 12061498 . T . PASS END=12061498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,1 chr1 12061499 . G . PASS END=12061502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:39:0,83,1408:0,83,255:38,1 chr1 12061503 . G . PASS END=12061503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,1 chr1 12061504 . A . PASS END=12061587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:32:0,80,1133:0,80,255:40,0 chr1 12061588 . A . PASS END=12061609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,75,255:25,0 chr1 12061610 . A . PASS END=12061612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 12061826 . G . PASS END=12061832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 12061833 . T . PASS END=12061833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1374:0,79,255:39,0 chr1 12061834 . C . PASS END=12061893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:95:42:0,95,1262:0,95,255:40,0 chr1 12062039 . G . PASS END=12062161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,99,1573:0,99,255:40,0 chr1 12063815 . C . PASS END=12063832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,398:0,33,255:12,0 chr1 12063833 . C . PASS END=12063864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 12063865 . G . PASS END=12063884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 12063885 . T . PASS END=12063921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr1 12063922 . G . PASS END=12063922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 12063923 . G . PASS END=12063923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 12063924 . G . PASS END=12063926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 12063927 . C . PASS END=12063927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 12063928 . G . PASS END=12063929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 12063930 . G . PASS END=12063931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 12063932 . G . PASS END=12063946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:21,0 chr1 12064049 . G . PASS END=12064108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1036:0,80,255:36,0 chr1 12064109 . G . PASS END=12064109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr1 12064110 . C . PASS END=12064126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,89,255:35,0 chr1 12064127 . A . PASS END=12064156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,1 chr1 12064157 . G . PASS END=12064157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 12064158 . G . PASS END=12064163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 12064164 . G . PASS END=12064177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 12064566 . G . PASS END=12064578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1173:0,96,255:34,0 chr1 12064579 . T . PASS END=12064579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr1 12064580 . G . PASS END=12064625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1205:0,84,255:36,0 chr1 12064626 . A . PASS END=12064626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 12064627 . T . PASS END=12064639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:33,0 chr1 12064640 . T . PASS END=12064641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:26,0 chr1 12064642 . C . PASS END=12064643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 12064644 . C . PASS END=12064645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1086:0,74,255:27,0 chr1 12064646 . A . PASS END=12064648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 12064649 . A . PASS END=12064672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,878:0,61,255:26,0 chr1 12064874 . G . PASS END=12064874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 12064882 . G . PASS END=12064919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,884:0,72,255:26,0 chr1 12064920 . C . PASS END=12064920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12064921 . A . PASS END=12064931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 12064932 . C . PASS END=12064932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12064933 . T . PASS END=12064933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12064934 . G . PASS END=12064936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12064937 . C . PASS END=12064942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 12064943 . C . PASS END=12064944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 12064945 . A . PASS END=12064953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:24,0 chr1 12064954 . T . PASS END=12064966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:19:0,54,692:0,57,255:19,0 chr1 12064967 . T . PASS END=12064967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:18,0 chr1 12064968 . G . PASS END=12064984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 12065768 . A . PASS END=12065770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 12065771 . G . PASS END=12065772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:30,0 chr1 12065773 . T . PASS END=12065773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 12065774 . T . PASS END=12065781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 12065782 . C . PASS END=12065782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 12065783 . T . PASS END=12065988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:31:0,81,1170:0,87,255:40,0 chr1 12065994 . C . PASS END=12065994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 12065996 . A . PASS END=12065996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 12066595 . G . PASS END=12066611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 12066612 . T . PASS END=12066612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 12066613 . C . PASS END=12066629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:23:0,62,831:0,62,255:26,0 chr1 12066630 . C . PASS END=12066630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 12066631 . A . PASS END=12066631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 12066632 . G . PASS END=12066639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 12066640 . C . PASS END=12066644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:26,0 chr1 12066645 . G . PASS END=12066662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:30,0 chr1 12066663 . C . PASS END=12066663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 12066664 . C . PASS END=12066664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 12066665 . A . PASS END=12066666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 12066667 . G . PASS END=12066672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 12066673 . T . PASS END=12066674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1086:0,77,255:28,0 chr1 12066675 . C . PASS END=12066678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:27,0 chr1 12066679 . G . PASS END=12066680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1047:0,74,255:27,0 chr1 12066681 . T . PASS END=12066692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 12066693 . C . PASS END=12066693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 12066694 . G . PASS END=12066710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 12066711 . A . PASS END=12066711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:25,0 chr1 12066712 . T . PASS END=12066712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 12066713 . C . PASS END=12066725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 12066726 . G . PASS END=12066726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 12066727 . G . PASS END=12066727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12066728 . G . PASS END=12066750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,961:0,65,255:26,0 chr1 12067110 . G . PASS END=12067113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 12067114 . G . PASS END=12067114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 12067115 . G . PASS END=12067121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr1 12067122 . G . PASS END=12067126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 12067127 . C . PASS END=12067128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 12067129 . G . PASS END=12067132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 12067133 . G . PASS END=12067133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 12067134 . C . PASS END=12067137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 12067138 . T . PASS END=12067141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 12067142 . C . PASS END=12067142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 12067143 . C . PASS END=12067146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 12067147 . C . PASS END=12067153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 12067154 . G . PASS END=12067156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 12067157 . C . PASS END=12067172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:18,0 chr1 12067173 . G . PASS END=12067180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 12067181 . G . PASS END=12067181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 12067182 . C . PASS END=12067186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,861:0,66,255:23,0 chr1 12067187 . G . PASS END=12067187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 12067188 . A . PASS END=12067214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:24:0,68,856:0,68,255:26,0 chr1 12067215 . G . PASS END=12067220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12067221 . A . PASS END=12067221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12067222 . A . PASS END=12067225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 12067226 . C . PASS END=12067226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 12067227 . C . PASS END=12067227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12067228 . A . PASS END=12067228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:27,0 chr1 12067229 . G . PASS END=12067229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 12067230 . T . PASS END=12067230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,843:0,70,255:27,0 chr1 12067231 . T . PASS END=12067232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 12067233 . G . PASS END=12067233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 12067234 . T . PASS END=12067255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:29,0 chr1 12067256 . G . PASS END=12067256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 12067257 . C . PASS END=12067259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 12067260 . C . PASS END=12067271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 12067272 . T . PASS END=12067272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 12067273 . A . PASS END=12067274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 12067275 . A . PASS END=12067275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 12067276 . C . PASS END=12067296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,793:0,66,255:23,0 chr1 12067297 . A . PASS END=12067310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,52,255:19,0 chr1 12069649 . G . PASS END=12069768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:36:0,90,1350:0,101,255:40,0 chr1 12069769 . A . PASS END=12069769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:32,0 chr1 12069770 . G . PASS END=12069781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:33,0 chr1 12069782 . A . PASS END=12069782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:28,0 chr1 12069783 . G . PASS END=12069783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 12069796 . C . PASS END=12069796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 12071553 . G . PASS END=12071622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:51:0,120,1800:0,124,255:40,0 chr1 12071658 . G . PASS END=12071658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 12071679 . C . PASS END=12071679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 12071743 . A . PASS END=12071743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12071753 . G . PASS END=12071753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 12071878 . G . PASS END=12071878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 12071919 . T . PASS END=12071919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 12072003 . C . PASS END=12072003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 12072035 . C . PASS END=12072035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 12072230 . T . PASS END=12072230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:18,0 chr1 12072435 . G . PASS END=12072435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 12072486 . T . PASS END=12072486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1200:0,83,255:29,0 chr1 12072492 . C . PASS END=12072492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 12072557 . G . PASS END=12072557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 12072568 . C . PASS END=12072568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 12072676 . C . PASS END=12072676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 12072690 . C . PASS END=12072690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 12072775 . C . PASS END=12072775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12072844 . G . PASS END=12072844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 12072898 . G . PASS END=12072898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 12072917 . G . PASS END=12072917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:25,0 chr1 12073014 . A . PASS END=12073014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 12073157 . C . PASS END=12073157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 12073161 . G . PASS END=12073161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 12073251 . G . PASS END=12073251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:23:31:0,23,950:0,23,255:29,1 chr1 12073284 . T . PASS END=12073284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 12073385 . G . PASS END=12073385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 12073415 . C . PASS END=12073416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1297:0,97,255:36,0 chr1 12073524 . C . PASS END=12073524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 12074314 . A . PASS END=12074464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:32:0,86,1172:0,86,255:40,0 chr1 12074465 . C . PASS END=12074465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:31,0 chr1 12074466 . T . PASS END=12074469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,108,255:33,0 chr1 12074470 . T . PASS END=12074485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:30:0,66,990:0,74,255:26,0 chr1 12074486 . T . PASS END=12074486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:23,0 chr1 12074487 . C . PASS END=12074489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:24,0 chr1 12074490 . C . PASS END=12074492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:24:0,42,810:0,42,255:19,0 chr1 12074493 . C . PASS END=12074493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:15,0 chr1 12074494 . T . PASS END=12074500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:23:0,41,630:0,41,255:17,0 chr1 12074501 . T . PASS END=12074501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 12074502 . G . PASS END=12074502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:12,0 chr1 12074503 . T . PASS END=12074505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:38:18:0,38,585:0,38,255:13,0 chr1 12074506 . C . PASS END=12074506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:14,0 chr1 12074507 . A . PASS END=12074509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:16,0 chr1 12074510 . G . LowGQ END=12074511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:18:0,0,463:0,0,255:13,0 chr1 12074512 . A . PASS END=12074512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 12074513 . G . PASS END=12074513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:10,0 chr1 12074514 . C . PASS END=12074515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:9,0 chr1 12074516 . G . PASS END=12074516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:9,0 chr1 12074517 . C . PASS END=12074517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr1 12074518 . C . LowGQ END=12074518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,451:21,0,255:8,0 chr1 12074519 . A . PASS END=12074520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 12074521 . A . PASS END=12074521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:9,0 chr1 12074522 . G . LowGQ END=12074522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,404:10,0,255:8,0 chr1 12074523 . A . PASS END=12074523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:9,0 chr1 12074524 . C . LowGQ END=12074524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,457:2,0,255:8,0 chr1 12074525 . T . PASS END=12074526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 12074527 . T . LowGQ END=12074528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:8,0 chr1 12074529 . T . PASS END=12074529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 12074530 . C . LowGQ END=12074530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,302:14,0,255:7,0 chr1 12074531 . A . PASS END=12074532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 12074533 . G . PASS END=12074533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,316:0,3,255:7,0 chr1 12074534 . T . PASS END=12074534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:8,0 chr1 12074535 . A . PASS END=12074536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 12081784 . A . PASS END=12081811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr1 12081812 . T . PASS END=12081812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 12081813 . G . PASS END=12081828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 12081829 . G . PASS END=12081839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 12081840 . G . PASS END=12081840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 12081841 . C . PASS END=12081850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 12081851 . T . PASS END=12081851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:18,0 chr1 12081852 . G . PASS END=12081862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 12081863 . C . PASS END=12081865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 12081866 . T . PASS END=12081867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 12081868 . C . PASS END=12081887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 12081888 . A . PASS END=12081888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 12081889 . G . PASS END=12081897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 12082152 . T . PASS END=12082153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 12082154 . A . PASS END=12082154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 12082155 . A . PASS END=12082175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 12082176 . T . PASS END=12082176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,715:0,35,255:21,0 chr1 12082177 . A . PASS END=12082180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 12082181 . C . PASS END=12082181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 12082182 . T . PASS END=12082198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 12082199 . C . PASS END=12082207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,820:0,53,255:19,0 chr1 12082208 . G . PASS END=12082210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 12082211 . C . PASS END=12082211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 12082212 . T . PASS END=12082222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,680:0,63,255:21,0 chr1 12082223 . G . PASS END=12082234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,53,255:19,0 chr1 12082235 . C . PASS END=12082242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 12082243 . G . PASS END=12082243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 12082244 . C . PASS END=12082244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 12082245 . C . PASS END=12082245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 12082246 . G . PASS END=12082251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 12082252 . C . PASS END=12082252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 12082253 . C . PASS END=12082254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 12082255 . T . PASS END=12082255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 12082256 . G . PASS END=12082258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 12082259 . G . PASS END=12082260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 12082261 . G . PASS END=12082282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,856:0,61,255:26,0 chr1 12082283 . G . PASS END=12082283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 12082284 . G . PASS END=12082318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,894:0,62,255:26,0 chr1 12082319 . T . PASS END=12082328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr1 12082329 . G . PASS END=12082329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 12082330 . C . PASS END=12082366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:30,0 chr1 12082367 . A . PASS END=12082367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr1 12082368 . C . PASS END=12082389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:30,0 chr1 12082390 . G . PASS END=12082392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 12082393 . C . PASS END=12082395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 12082396 . C . PASS END=12082398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 12082399 . G . PASS END=12082410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:33,0 chr1 12082411 . C . PASS END=12082411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:31,0 chr1 12082412 . A . PASS END=12082441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1156:0,83,255:32,0 chr1 12082442 . A . PASS END=12082442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 12082443 . C . PASS END=12082446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 12082447 . A . PASS END=12082447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:27,0 chr1 12082448 . G . PASS END=12082456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 12082457 . G . PASS END=12082471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,959:0,65,255:25,0 chr1 12082472 . C . PASS END=12082472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 12082473 . C . PASS END=12082490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 12082491 . C . PASS END=12082499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 12082890 . C . PASS END=12082891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 12082892 . C . PASS END=12082892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 12082893 . A . PASS END=12082904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 12082905 . T . PASS END=12082905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 12082906 . C . PASS END=12082925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,923:0,75,255:26,0 chr1 12082926 . A G, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,10,0:0,16,0:75:163,78,0,992,78,992:255,78,0:0,0:1.2525e+02,7.5247e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,14:0,0,12,14 chr1 12082927 . A . PASS END=12082963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,785:0,62,255:25,0 chr1 12082964 . C . PASS END=12082971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 12082972 . C . PASS END=12082972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 12082973 . A . PASS END=12082974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 12089090 . G . PASS END=12089111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,584:0,45,255:19,0 chr1 12089112 . C . PASS END=12089120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 12089121 . C . PASS END=12089133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,767:0,50,255:19,0 chr1 12089134 . T . PASS END=12089134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 12089135 . T . PASS END=12089135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,677:0,27,255:20,0 chr1 12089136 . C . PASS END=12089143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 12089144 . A . PASS END=12089144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 12089145 . G . PASS END=12089152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 12089153 . A . PASS END=12089153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 12089154 . G . PASS END=12089159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 12089160 . G . PASS END=12089160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 12089161 . G . PASS END=12089162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 12089163 . A . PASS END=12089180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 12089181 . T . PASS END=12089185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 12089186 . G . PASS END=12089190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 12089191 . C . PASS END=12089194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 12089195 . C . PASS END=12089198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 12089280 . A . PASS END=12089285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 12089286 . G . PASS END=12089286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 12089287 . T . PASS END=12089288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 12089289 . G . PASS END=12089289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 12089290 . C . PASS END=12089292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 12089293 . G . PASS END=12089293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 12089294 . G . PASS END=12089297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 12089298 . G . PASS END=12089304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 12089305 . A . PASS END=12089305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr1 12089306 . G . PASS END=12089310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 12089311 . G . PASS END=12089311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 12089312 . G . PASS END=12089314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr1 12089315 . G . PASS END=12089315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr1 12089316 . C . PASS END=12089320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 12089321 . T . PASS END=12089321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 12089322 . G . PASS END=12089326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 12089327 . A . PASS END=12089327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 12089328 . A . PASS END=12089338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 12089822 . G . PASS END=12089822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 12089823 . C . PASS END=12089823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 12089824 . G . PASS END=12089828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:18,0 chr1 12089829 . C . PASS END=12089829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 12089830 . T . PASS END=12089830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 12089831 . G . PASS END=12089831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 12089832 . T . PASS END=12089832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 12089833 . T . PASS END=12089851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr1 12089852 . T . PASS END=12089852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 12089853 . G . PASS END=12089877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:24,0 chr1 12089878 . A . PASS END=12089882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,59,255:20,0 chr1 12089883 . C . PASS END=12089912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,814:0,62,255:25,0 chr1 12089913 . G . PASS END=12089913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 12089914 . C . PASS END=12089915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 12089916 . G . PASS END=12089951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,684:0,57,255:19,0 chr1 12090085 . G . PASS END=12090181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1125:0,80,255:38,0 chr1 12091323 . C . PASS END=12091327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 12091328 . C . PASS END=12091328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 12091329 . C . PASS END=12091330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 12091331 . G . PASS END=12091331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:23,0 chr1 12091332 . C . PASS END=12091340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 12091341 . G . PASS END=12091341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr1 12091342 . A . PASS END=12091347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 12091348 . T . PASS END=12091356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 12091357 . A . PASS END=12091357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr1 12091358 . G . PASS END=12091359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12091360 . C . PASS END=12091362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:29,0 chr1 12091363 . A . PASS END=12091363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 12091364 . G . PASS END=12091364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 12091365 . A . PASS END=12091365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 12091366 . A . PASS END=12091387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:29:0,83,1157:0,83,255:33,0 chr1 12091388 . G . PASS END=12091388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:32,0 chr1 12091389 . G . PASS END=12091398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1224:0,83,255:33,0 chr1 12091399 . C . PASS END=12091399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 12091400 . C . PASS END=12091442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1082:0,86,255:31,0 chr1 12091443 . A . PASS END=12091443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 12091444 . G . PASS END=12091446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 12091447 . G . PASS END=12091448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 12091449 . C . PASS END=12091453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 12091454 . T . PASS END=12091460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,79,255:26,0 chr1 12091598 . G . PASS END=12091598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 12091599 . G . PASS END=12091602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 12091603 . A . PASS END=12091603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 12091604 . G . PASS END=12091605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 12091606 . C . PASS END=12091606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 12091607 . C . PASS END=12091608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:23,0 chr1 12091609 . C . PASS END=12091609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 12091610 . C . PASS END=12091612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 12091613 . C . PASS END=12091613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 12091614 . C . PASS END=12091615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 12091616 . T . PASS END=12091616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 12091617 . G . PASS END=12091618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:24,0 chr1 12091779 . G . PASS END=12091828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr1 12091829 . G . PASS END=12091829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 12091830 . G . PASS END=12091834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:17,0 chr1 12091835 . T . PASS END=12091835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 12091836 . C . PASS END=12091838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 12091839 . C . PASS END=12091839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 12091840 . C . PASS END=12091842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 12091843 . A . PASS END=12091858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,466:0,39,255:13,0 chr1 12091859 . G . PASS END=12091859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 12091860 . C . PASS END=12091865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 12123656 . A . PASS END=12123657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 12123658 . G . PASS END=12123659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12123660 . G . PASS END=12123664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12123665 . C . PASS END=12123666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 12123667 . C . PASS END=12123667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 12123668 . C . PASS END=12123684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 12123685 . G . PASS END=12123685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:30,0 chr1 12123686 . C . PASS END=12123692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 12123693 . T . PASS END=12123693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,2 chr1 12123694 . G . PASS END=12123694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1194:0,36,255:31,2 chr1 12123695 . G . PASS END=12123695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 12123696 . G . PASS END=12123718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1224:0,83,255:32,0 chr1 12144521 . G . PASS END=12144526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr1 12144527 . C . PASS END=12144537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:29,0 chr1 12144538 . C . PASS END=12144538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 12144539 . A . PASS END=12144539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,872:0,31,255:27,0 chr1 12144540 . C . PASS END=12144545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 12144546 . A . PASS END=12144546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 12144547 . T . PASS END=12144555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 12144556 . C . PASS END=12144556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 12144557 . A . PASS END=12144560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 12144561 . A . PASS END=12144562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 12144563 . T . PASS END=12144563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr1 12144564 . A . PASS END=12144565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 12144566 . T . PASS END=12144566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,967:0,32,255:23,0 chr1 12144567 . A . PASS END=12144577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,878:0,64,255:25,0 chr1 12144578 . G . PASS END=12144578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:21,0 chr1 12144579 . T . PASS END=12144582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:23,0 chr1 12144583 . G . PASS END=12144585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 12144586 . G . PASS END=12144588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 12144589 . C . PASS END=12144589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:19,0 chr1 12144590 . T . PASS END=12144590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 12144591 . G . PASS END=12144592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 12144593 . T . PASS END=12144605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,46,255:18,0 chr1 12144606 . T . PASS END=12144607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,40,255:13,0 chr1 12144608 . G . PASS END=12144608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 12157158 . G . PASS END=12157175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1041:0,84,255:36,0 chr1 12157176 . A . PASS END=12157176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 12157177 . G . PASS END=12157255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1215:0,84,255:40,0 chr1 12157256 . T . PASS END=12157256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 12157257 . G . PASS END=12157267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 12157268 . T . PASS END=12157268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1001:0,59,255:28,0 chr1 12157269 . C . PASS END=12157273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12157274 . G . PASS END=12157274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 12164436 . A . PASS END=12164440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,613:0,40,255:19,0 chr1 12164441 . C . PASS END=12164443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 12164444 . G . PASS END=12164445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 12164446 . G . PASS END=12164448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 12164449 . G . PASS END=12164449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 12164450 . A . PASS END=12164451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,687:0,63,255:21,0 chr1 12164452 . G . PASS END=12164452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 12164453 . A . PASS END=12164471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,677:0,63,255:26,0 chr1 12164472 . C . PASS END=12164489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 12164490 . G . PASS END=12164490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 12164491 . T . PASS END=12164505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1056:0,84,255:31,0 chr1 12164506 . C . PASS END=12164527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,706:0,61,255:26,0 chr1 12164528 . T . PASS END=12164528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:21,0 chr1 12164529 . C . PASS END=12164529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 12164530 . C . PASS END=12164530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 12164531 . T . PASS END=12164548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:25,0 chr1 12164549 . C . PASS END=12164550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,852:0,58,255:23,0 chr1 12164551 . T . PASS END=12164555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 12164556 . T . PASS END=12164556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 12164557 . C . PASS END=12164563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 12164564 . G . PASS END=12164564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 12164565 . C . PASS END=12164572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 12164573 . A . PASS END=12164579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 12164580 . A . PASS END=12164582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 12164583 . T . PASS END=12164583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 12164584 . C . PASS END=12164588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 12169623 . G . PASS END=12169627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 12169628 . G . PASS END=12169641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 12169642 . G . PASS END=12169652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 12169653 . C . PASS END=12169656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 12169657 . T . PASS END=12169659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 12169660 . C . PASS END=12169666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 12169667 . G . PASS END=12169683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:15:0,45,559:0,45,255:19,0 chr1 12169684 . C . PASS END=12169713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr1 12170098 . T . PASS END=12170118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 12170119 . G . PASS END=12170148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:19,0 chr1 12170149 . T . PASS END=12170184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:21,0 chr1 12170185 . C . PASS END=12170192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 12170193 . A . PASS END=12170198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 12170199 . C . PASS END=12170199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 12170200 . T . PASS END=12170203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 12170204 . A . PASS END=12170241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:19,0 chr1 12170242 . A . PASS END=12170261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,34,255:14,0 chr1 12171955 . G . PASS END=12171972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:19,0 chr1 12171973 . C . PASS END=12171973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 12171974 . A . PASS END=12171981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 12171982 . A . PASS END=12171994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 12171995 . T . PASS END=12172029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 12172030 . A . PASS END=12172041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 12172042 . G . PASS END=12172067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 12172068 . C . PASS END=12172071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr1 12175634 . A . PASS END=12175636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 12175637 . A . PASS END=12175660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:26,0 chr1 12175661 . C . PASS END=12175666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 12175667 . A . PASS END=12175667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 12175668 . C . PASS END=12175691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:31,0 chr1 12175692 . A . PASS END=12175706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1174:0,96,255:32,0 chr1 12175707 . T . PASS END=12175710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 12175711 . A . PASS END=12175712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 12175713 . A . PASS END=12175713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:26,0 chr1 12175714 . T . PASS END=12175716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 12175717 . G . PASS END=12175720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12175721 . C . PASS END=12175728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 12175729 . C T, 130.81 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,15,0:0,13,0:81:169,84,0,1056,84,1056:255,84,0:0,0:1.3081e+02,8.0813e+01,0.0000e+00,4.5000e+02,1.1558e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,17:0,0,12,16 chr1 12175730 . G . PASS END=12175735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 12175736 . G . PASS END=12175751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 12175752 . A . PASS END=12175752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:22,0 chr1 12175753 . A . PASS END=12175766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 12175767 . G . PASS END=12175776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 12175777 . A . PASS END=12175786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,53,255:19,0 chr1 12183341 . A . PASS END=12183380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,490:0,42,255:18,0 chr1 12183381 . G . PASS END=12183381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 12183382 . G . PASS END=12183390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 12183391 . C . PASS END=12183391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 12183392 . C . PASS END=12183393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 12183394 . G . PASS END=12183395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 12183396 . C . PASS END=12183434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 12183772 . C . PASS END=12183776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 12183777 . G . PASS END=12183800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:22,0 chr1 12183801 . A . PASS END=12183801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 12183802 . C . PASS END=12183805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 12183806 . C . PASS END=12183806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 12183807 . A . PASS END=12183813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,884:0,72,255:26,0 chr1 12183814 . T . PASS END=12183817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 12183818 . A . PASS END=12183820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12183821 . C . PASS END=12183822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12183823 . G . PASS END=12183836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,963:0,67,255:26,0 chr1 12183837 . G . PASS END=12183837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:20,0 chr1 12183838 . C . PASS END=12183849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 12183850 . T . PASS END=12183884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:18,0 chr1 12186008 . G . PASS END=12186009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12186010 . C . PASS END=12186012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 12186013 . G . PASS END=12186016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:35,0 chr1 12186017 . T . PASS END=12186017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:34,0 chr1 12186018 . C . PASS END=12186109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1396:0,81,255:40,0 chr1 12186240 . A . PASS END=12186293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:28:0,83,1035:0,83,255:34,0 chr1 12195645 . A . PASS END=12195648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 12195649 . C . PASS END=12195661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr1 12195662 . A . PASS END=12195665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 12195666 . C . PASS END=12195670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 12198286 . C . PASS END=12198333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,413:0,33,255:13,0 chr1 12198334 . G . PASS END=12198349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 12198350 . C . PASS END=12198353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 12198354 . G . PASS END=12198358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 12198359 . A . PASS END=12198453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,405:0,36,255:13,0 chr1 12198454 . G . PASS END=12198454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 12198455 . A . PASS END=12198460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 12198461 . G . PASS END=12198461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 12198462 . G . PASS END=12198462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 12198463 . G . PASS END=12198463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 12198464 . T . PASS END=12198464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:7,0 chr1 12198465 . G . PASS END=12198486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 12198487 . A . PASS END=12198490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 12198491 . T . PASS END=12198491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,292:0,13,255:9,0 chr1 12198492 . T . PASS END=12198493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 12202344 . A . PASS END=12202344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 12202345 . G . PASS END=12202348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 12202349 . A . PASS END=12202349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,563:0,21,255:15,0 chr1 12202350 . T . PASS END=12202358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,568:0,51,255:17,0 chr1 12202359 . T . PASS END=12202359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 12202360 . G . PASS END=12202378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,607:0,51,255:17,0 chr1 12202379 . G . PASS END=12202379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 12202380 . T . PASS END=12202391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,592:0,40,255:19,0 chr1 12202392 . A . PASS END=12202392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,619:0,27,255:18,0 chr1 12202393 . G . PASS END=12202393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 12202394 . G . PASS END=12202394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 12202395 . C . PASS END=12202399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 12202400 . C . PASS END=12202401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 12202402 . G . PASS END=12202402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:17,0 chr1 12202403 . C . PASS END=12202409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 12202410 . G . PASS END=12202410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 12202411 . C . PASS END=12202413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 12202414 . G . PASS END=12202421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 12202422 . C . PASS END=12202422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 12202423 . G . PASS END=12202466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,809:0,69,255:25,0 chr1 12202467 . A . PASS END=12202471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,56,255:19,0 chr1 12202472 . C . PASS END=12202518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,860:0,69,255:24,0 chr1 12202519 . C . PASS END=12202519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 12202520 . G . PASS END=12202525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 12202526 . A . PASS END=12202527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 12202528 . G . PASS END=12202530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 12202531 . C . PASS END=12202536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 12202537 . G . PASS END=12202548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 12202549 . G . PASS END=12202569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,765:0,50,255:19,0 chr1 12202570 . A . PASS END=12202570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 12202571 . G . PASS END=12202588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,652:0,51,255:18,0 chr1 12227149 . A . PASS END=12227162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 12227163 . C . PASS END=12227185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,503:0,42,255:15,0 chr1 12227186 . G . PASS END=12227195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 12227196 . C . PASS END=12227199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 12227200 . G . PASS END=12227202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 12227203 . G . PASS END=12227220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 12227221 . G . PASS END=12227221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 12227222 . C . PASS END=12227226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 12248853 . G . PASS END=12248856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,729:0,57,255:19,0 chr1 12248857 . C . PASS END=12248859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 12248860 . T . PASS END=12248860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 12248861 . T . PASS END=12248883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr1 12248884 . G . PASS END=12248889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 12248890 . C . PASS END=12248904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:23,0 chr1 12248905 . A . PASS END=12248909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 12248910 . T . PASS END=12248910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 12248911 . A . PASS END=12248919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 12248920 . C . PASS END=12248930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:16,0 chr1 12248931 . T . PASS END=12248931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr1 12248932 . G . PASS END=12248936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 12248937 . A . PASS END=12248941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 12248942 . A G, 49.91 PASS DP=15;MQ=250.00;MQRankSum=3.183;ReadPosRankSum=2.257;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:1,6,0:7,1,0:43:85,0,41,250,257,507:226,0,243:7,0:4.9910e+01,2.1822e-04,4.3971e+01,2.5014e+02,2.9190e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,8,3,4:7,1,2,5 chr1 12248943 . T . PASS END=12248948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 12248949 . C . PASS END=12248952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 12251014 . G . PASS END=12251038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,460:0,45,255:16,0 chr1 12251039 . C . PASS END=12251039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 12251040 . A . PASS END=12251041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 12251042 . G . PASS END=12251042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 12251043 . A . PASS END=12251048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 12251049 . G . PASS END=12251049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 12251050 . A . PASS END=12251054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:19,0 chr1 12251055 . G . PASS END=12251055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,659:0,8,255:18,0 chr1 12251056 . T . PASS END=12251062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 12251063 . C . PASS END=12251075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 12251076 . A . PASS END=12251079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 12251080 . C . PASS END=12251083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 12251084 . C . PASS END=12251084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 12251085 . A . PASS END=12251094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 12251095 . G . PASS END=12251139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:18,0 chr1 12251140 . C . PASS END=12251140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 12251141 . T . PASS END=12251142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 12251831 . A . PASS END=12251832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 12251833 . C . PASS END=12251833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 12251834 . A . PASS END=12251834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 12251835 . G . PASS END=12251837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 12251838 . G . PASS END=12251838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 12251839 . G . PASS END=12251845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 12251846 . A . PASS END=12251861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:23,0 chr1 12251862 . A . PASS END=12251862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 12251863 . C . PASS END=12251886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr1 12251887 . C . PASS END=12251889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 12251890 . G . PASS END=12251898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr1 12251899 . T . PASS END=12251899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 12251900 . G . PASS END=12251914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 12251915 . A . PASS END=12251915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 12251916 . G . PASS END=12251922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:22,0 chr1 12251923 . T . PASS END=12251923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 12251924 . G . PASS END=12251939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,831:0,61,255:24,0 chr1 12251940 . G . PASS END=12251940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 12251941 . C . PASS END=12251946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 12251947 . A . PASS END=12251947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,730:0,55,255:22,0 chr1 12251948 . A . PASS END=12251958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr1 12251959 . G . PASS END=12251959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 12251960 . G . PASS END=12251963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 12251964 . C . PASS END=12251973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:17,0 chr1 12251974 . A . PASS END=12251974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 12251975 . G . PASS END=12251980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,548:0,40,255:15,0 chr1 12252405 . A . PASS END=12252415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr1 12252488 . G . PASS END=12252492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 12252493 . G . PASS END=12252493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 12252494 . A . PASS END=12252502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,676:0,54,255:19,0 chr1 12252503 . A . PASS END=12252523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 12252524 . C . PASS END=12252524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,688:0,22,255:20,0 chr1 12252525 . C . PASS END=12252538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,864:0,72,255:24,0 chr1 12252539 . C . PASS END=12252541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 12252542 . A . PASS END=12252542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,756:0,33,255:18,0 chr1 12252543 . C . PASS END=12252579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 12252580 . A . PASS END=12252581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 12252920 . C . PASS END=12252937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,861:0,69,255:26,0 chr1 12252938 . C . PASS END=12252954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:28,0 chr1 12252955 . T G, 44.97 PASS DP=28;MQ=250.00;MQRankSum=4.291;ReadPosRankSum=4.291;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,10,0:0.357,0.000:28:8,3,0:10,7,0:44:80,0,50,350,644,993:255,0,255:17,0:4.4966e+01,1.6024e-04,5.3000e+01,3.4954e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,6,4:13,5,5,5 chr1 12252956 . G . PASS END=12252961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr1 12252962 . A . PASS END=12252962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 12252963 . G . PASS END=12252971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 12252972 . T . PASS END=12252972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:27,0 chr1 12252973 . C . PASS END=12252992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 12252993 . A . PASS END=12252993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:28,0 chr1 12252994 . T . PASS END=12253008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1169:0,80,255:32,0 chr1 12253009 . T . PASS END=12253010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 12253011 . C . PASS END=12253013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 12253014 . T . PASS END=12253014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 12253015 . T . PASS END=12253025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,1008:0,80,255:27,0 chr1 12253026 . G . PASS END=12253026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 12253027 . T . PASS END=12253134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1056:0,85,255:38,0 chr1 12253135 . G . PASS END=12253155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 12254012 . G . PASS END=12254017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1194:0,83,255:33,0 chr1 12254018 . T . PASS END=12254018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 12254019 . T . PASS END=12254073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,86,255:39,0 chr1 12254074 . A . PASS END=12254076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 12254077 . A . PASS END=12254087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 12254088 . A . PASS END=12254088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 12254089 . A . PASS END=12254089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 12254641 . A . PASS END=12254862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:94:36:0,94,1242:0,94,255:40,0 chr1 12254863 . G . PASS END=12254863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:31,0 chr1 12254864 . T . PASS END=12254900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1209:0,86,255:37,0 chr1 12254901 . T . PASS END=12254901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1259:0,75,255:34,0 chr1 12254902 . T . PASS END=12254904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1575:0,111,255:36,0 chr1 12254905 . T . PASS END=12254905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr1 12254906 . G . PASS END=12254970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:34:0,80,1296:0,80,255:37,0 chr1 12254971 . T . PASS END=12254971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 12254972 . T . PASS END=12255012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1294:0,89,255:40,0 chr1 12255013 . T . PASS END=12255013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1402:0,79,255:32,0 chr1 12255014 . G . PASS END=12255049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1164:0,83,255:35,0 chr1 12255050 . T . PASS END=12255050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:29,0 chr1 12255051 . T . PASS END=12255056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1034:0,80,255:31,0 chr1 12255057 . T . PASS END=12255057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 12255058 . G . PASS END=12255069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 12255070 . T . PASS END=12255070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,935:0,79,255:29,0 chr1 12255071 . T . PASS END=12255083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1141:0,82,255:32,0 chr1 12255084 . T . PASS END=12255084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,989:0,79,255:28,0 chr1 12255085 . C . PASS END=12255101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 12255102 . T . PASS END=12255102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 12255103 . T . PASS END=12255110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr1 12255111 . A . PASS END=12255111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 12255112 . A . PASS END=12255117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1081:0,93,255:31,0 chr1 12255118 . G . PASS END=12255118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 12255119 . G . PASS END=12255119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 12255120 . A . PASS END=12255124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:24,0 chr1 12255125 . C . PASS END=12255127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:54:29:0,54,810:0,87,255:18,0 chr1 12255128 . G . PASS END=12255128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 12255129 . T . PASS END=12255138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:24:0,48,720:0,72,255:19,0 chr1 12255139 . A . PASS END=12255139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 12255140 . G . PASS END=12255143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 12255144 . C . PASS END=12255145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 12255146 . T . PASS END=12255146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:11,0 chr1 12255147 . T . PASS END=12255154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:15:0,30,450:0,40,255:13,0 chr1 12255155 . G . PASS END=12255179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 12255180 . G . PASS END=12255212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 12255213 . T . PASS END=12255220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 12255221 . C . PASS END=12255223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 12255224 . C . PASS END=12255251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 12262024 . C . PASS END=12262034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 12262035 . T . PASS END=12262035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr1 12262036 . G . PASS END=12262046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:17,0 chr1 12262047 . C . PASS END=12262047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 12262048 . C . PASS END=12262048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 12262049 . G . PASS END=12262049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 12262050 . G . PASS END=12262051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 12262052 . G . PASS END=12262059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:25,0 chr1 12262060 . G . PASS END=12262060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 12262061 . G . PASS END=12262064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 12262065 . C . PASS END=12262065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 12262066 . G . PASS END=12262079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 12262080 . G . PASS END=12262082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 12262083 . G . PASS END=12262084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12262085 . T . PASS END=12262217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1139:0,80,255:40,0 chr1 12262218 . C . PASS END=12262223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 12262224 . C . PASS END=12262225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 12262226 . C . PASS END=12262228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 12262564 . G . PASS END=12262629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,111,1665:0,123,255:40,0 chr1 12266794 . C . PASS END=12266794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr1 12266795 . A . PASS END=12266800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 12266801 . T . PASS END=12266801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 12266802 . T . PASS END=12266802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 12266803 . C . PASS END=12266803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,674:0,22,255:20,0 chr1 12266804 . C . PASS END=12266809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,815:0,69,255:24,0 chr1 12266810 . T . PASS END=12266811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 12266812 . G . PASS END=12266814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,954:0,75,255:26,0 chr1 12266815 . A . PASS END=12266815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:24,0 chr1 12266816 . T . PASS END=12266817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:26,0 chr1 12266818 . G . PASS END=12266820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:31,0 chr1 12266821 . C . PASS END=12266821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:29,0 chr1 12266822 . C . PASS END=12266828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr1 12266829 . A . PASS END=12266829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 12266830 . A . PASS END=12266830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 12266831 . T . PASS END=12266833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 12266834 . C . PASS END=12266837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 12266838 . T . PASS END=12266838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:30,0 chr1 12266839 . G . PASS END=12266853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1105:0,82,255:33,0 chr1 12266854 . G . PASS END=12266854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 12266855 . T . PASS END=12266859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 12266860 . G . PASS END=12266860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1233:0,61,255:33,0 chr1 12266861 . C . PASS END=12266863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:35,0 chr1 12266864 . T . PASS END=12266864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:33,0 chr1 12266865 . G . PASS END=12266873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:36:0,96,1329:0,97,255:35,0 chr1 12266874 . T . PASS END=12266874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1325:0,62,255:36,0 chr1 12266875 . C . PASS END=12266894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1303:0,95,255:37,0 chr1 12266895 . A . PASS END=12266895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 12266896 . G . PASS END=12266936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1161:0,80,255:39,0 chr1 12266937 . C . PASS END=12266937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr1 12266938 . C . PASS END=12266954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 12266955 . C . PASS END=12266955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 12266956 . C . PASS END=12266958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 12266959 . T . PASS END=12266959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 12266960 . C . PASS END=12266961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 12266962 . C . PASS END=12266964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 12266965 . A . PASS END=12266965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:24,0 chr1 12266966 . G . PASS END=12266967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1124:0,77,255:26,0 chr1 12266968 . A . PASS END=12266986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 12266987 . A . PASS END=12266987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 12266988 . C . PASS END=12267030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1219:0,93,255:33,0 chr1 12267031 . A . PASS END=12267036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 12267037 . T . PASS END=12267039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 12267040 . C . PASS END=12267045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:20,0 chr1 12267046 . G . PASS END=12267077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 12267292 . C T, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,727,57,727:255,57,0:0,0:1.0418e+02,5.4182e+01,1.6567e-05,4.5000e+02,8.8952e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,10:0,0,12,7 chr1 12268499 . G A, 179.42 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,23,0:0,21,0:129:217,132,0,1687,132,1687:255,132,0:0,0:1.7942e+02,1.2942e+02,0.0000e+00,4.5000e+02,1.6419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,28:0,0,23,21 chr1 12294324 . A . PASS END=12294420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,105,1685:0,105,255:40,1 chr1 12302570 . G . PASS END=12302647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:77:0,120,1800:0,201,255:40,0 chr1 12304303 . G . PASS END=12304312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,917:0,62,255:26,0 chr1 12304313 . G . PASS END=12304493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:27:0,81,1008:0,81,255:40,0 chr1 12304594 . A . PASS END=12304674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,105,1482:0,110,255:40,0 chr1 12309280 . T . PASS END=12309396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,120,1800:0,135,255:40,0 chr1 12313779 . G . PASS END=12313883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:47:0,98,1620:0,98,255:40,0 chr1 12316390 . G . PASS END=12316413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1219:0,83,255:40,0 chr1 12316414 . A . PASS END=12316414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1319:0,65,255:36,0 chr1 12316415 . G . PASS END=12316530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1215:0,102,255:40,0 chr1 12316531 . C . PASS END=12316558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 12316559 . A . PASS END=12316559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 12316560 . G . PASS END=12316560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 12317044 . C . PASS END=12317144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,144,255:40,0 chr1 12317992 . C . PASS END=12318136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1161:0,80,255:40,0 chr1 12318137 . G . PASS END=12318137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 12318138 . G . PASS END=12318138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 12318139 . C . PASS END=12318160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:26:0,62,930:0,62,255:25,0 chr1 12320750 . G . PASS END=12320851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,120,1800:0,128,255:40,0 chr1 12321005 . A . PASS END=12321016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 12321017 . C . PASS END=12321017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:31,0 chr1 12321018 . C . PASS END=12321028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:32,0 chr1 12321029 . T . PASS END=12321031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 12321032 . C . PASS END=12321182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1178:0,83,255:39,0 chr1 12321183 . A . PASS END=12321202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,68,255:26,0 chr1 12321203 . C . PASS END=12321206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 12321958 . G . PASS END=12322134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,84,255:40,0 chr1 12322135 . C . PASS END=12322137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 12326938 . A . PASS END=12327066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:35:0,81,1215:0,105,255:40,0 chr1 12327067 . C . PASS END=12327068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 12327902 . C . PASS END=12327977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:69:0,120,1800:0,207,255:40,0 chr1 12328763 . C . PASS END=12328764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 12328765 . G . PASS END=12328765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 12328766 . C . PASS END=12328767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 12328768 . G . PASS END=12328788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:29:0,86,1102:0,86,255:33,0 chr1 12328789 . G . PASS END=12328789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr1 12328790 . A . PASS END=12328790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:33,0 chr1 12328791 . G . PASS END=12328791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:33,0 chr1 12328792 . A . PASS END=12328798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:34:0,80,1103:0,80,255:36,0 chr1 12328799 . A . PASS END=12328799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr1 12328800 . T . PASS END=12328808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1167:0,80,255:36,0 chr1 12328809 . T . PASS END=12328809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1220:0,72,255:36,0 chr1 12328810 . C . PASS END=12328814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1327:0,95,255:37,0 chr1 12328815 . G . PASS END=12328815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1232:0,75,255:37,0 chr1 12328816 . C . PASS END=12328871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:38:0,82,1260:0,82,255:40,0 chr1 12328872 . C . PASS END=12328894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 12328895 . T . PASS END=12328895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 12328896 . A . PASS END=12328918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,854:0,72,255:24,0 chr1 12328919 . A . PASS END=12328933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:16:0,42,630:0,48,255:18,0 chr1 12331051 . G . PASS END=12331071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1258:0,87,255:40,0 chr1 12331072 . T . PASS END=12331181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:96:38:0,96,1440:0,98,255:40,0 chr1 12333060 . G . PASS END=12333192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:44:0,84,1260:0,87,255:40,2 chr1 12335882 . A . PASS END=12335901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 12335902 . A . PASS END=12335902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 12335903 . G . PASS END=12335903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 12335904 . G . PASS END=12335904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 12335905 . G . PASS END=12335917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,674:0,51,255:18,0 chr1 12335918 . C . PASS END=12335918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 12335919 . T . PASS END=12335945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,629:0,54,255:19,0 chr1 12335946 . A . PASS END=12335946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 12335947 . T . PASS END=12335947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 12335948 . A . PASS END=12335950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 12335951 . A . PASS END=12335955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 12335956 . C . PASS END=12335960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 12335961 . G . PASS END=12335962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 12335963 . C . PASS END=12335969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 12335970 . T . PASS END=12335997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:34,0 chr1 12335998 . A . PASS END=12335998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1155:0,55,255:30,0 chr1 12335999 . G . PASS END=12336215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:36:0,90,1344:0,90,255:40,0 chr1 12336216 . G . PASS END=12336228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:38:0,98,1410:0,98,255:38,0 chr1 12336229 . T . PASS END=12336229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:47:38:0,47,932:0,47,255:30,0 chr1 12336230 . T . PASS END=12336231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:38:0,99,1485:0,103,255:33,0 chr1 12336232 . A . PASS END=12336232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1171:0,73,255:34,0 chr1 12336233 . T . PASS END=12336235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,105,1575:0,119,255:35,0 chr1 12336236 . A . PASS END=12336236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1328:0,68,255:35,0 chr1 12336237 . T . PASS END=12336238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,105,1575:0,106,255:34,0 chr1 12336239 . C . PASS END=12336239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,7:41:7:41:0,7,1016:0,7,255:29,0 chr1 12336240 . T . PASS END=12336240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1163:0,61,255:34,0 chr1 12336241 . T . PASS END=12336241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1365:0,98,255:34,0 chr1 12336242 . C . PASS END=12336242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:47:38:0,47,999:0,47,255:33,0 chr1 12336243 . A . PASS END=12336244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1127:0,97,255:34,0 chr1 12336245 . A . PASS END=12336245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1217:0,64,255:34,0 chr1 12336246 . T . PASS END=12336246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1280:0,94,255:34,0 chr1 12336247 . C . PASS END=12336247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,999:0,58,255:32,0 chr1 12336248 . C . PASS END=12336252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:88:35:0,88,1096:0,88,255:36,0 chr1 12336253 . T . LowGQ END=12336253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,8:37:0:37:0,0,722:44,0,255:25,0 chr1 12336254 . A . PASS END=12336254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1258:0,94,255:32,0 chr1 12336255 . T . PASS END=12336255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:31,0 chr1 12336256 . C . PASS END=12336256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:16:37:0,16,983:0,16,255:30,0 chr1 12336257 . C . PASS END=12336258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1296:0,94,255:33,0 chr1 12336259 . G . PASS END=12336259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1036:0,58,255:29,0 chr1 12336260 . G . PASS END=12336261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,108,255:31,0 chr1 12336262 . G . PASS END=12336262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:31,0 chr1 12336263 . C . PASS END=12336264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:31,0 chr1 12336265 . G . PASS END=12336265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1070:0,58,255:28,0 chr1 12336266 . T . PASS END=12336273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1172:0,85,255:31,0 chr1 12336274 . G . PASS END=12336274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1117:0,72,255:30,0 chr1 12336275 . G . PASS END=12336279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:33,0 chr1 12336280 . T . PASS END=12336280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:32,0 chr1 12336281 . T . PASS END=12336290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1159:0,81,255:35,0 chr1 12336291 . A . PASS END=12336295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:35,0 chr1 12336296 . T . PASS END=12336296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:17:38:0,17,1114:0,17,255:31,0 chr1 12336297 . C . PASS END=12336298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1238:0,97,255:33,0 chr1 12336299 . A . PASS END=12336299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:32,0 chr1 12336300 . C . PASS END=12336301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,111,255:32,0 chr1 12336302 . T . PASS END=12336302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1105:0,42,255:31,0 chr1 12336303 . T . PASS END=12336306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 12336307 . G . PASS END=12336307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1205:0,59,255:30,0 chr1 12336308 . A . PASS END=12336323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1276:0,81,255:36,0 chr1 12336324 . A . PASS END=12336324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr1 12336325 . C . PASS END=12336367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:36:0,80,1266:0,80,255:37,0 chr1 12336368 . C . PASS END=12336368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:37,0 chr1 12336369 . T . PASS END=12336389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1357:0,84,255:38,0 chr1 12336390 . A . PASS END=12336390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr1 12336391 . A . PASS END=12336453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:32:0,81,1066:0,81,255:40,0 chr1 12336454 . A . PASS END=12336454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:26,0 chr1 12336455 . G . PASS END=12336484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1119:0,85,255:31,0 chr1 12336485 . A . PASS END=12336486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 12336487 . G . PASS END=12336495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1137:0,80,255:28,0 chr1 12336496 . G . PASS END=12336499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12336500 . C . PASS END=12336517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 12336518 . A . PASS END=12336518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 12336519 . A . PASS END=12336529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,932:0,81,255:28,0 chr1 12336530 . A . PASS END=12336532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 12336533 . G . PASS END=12336580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:34:0,84,1225:0,84,255:38,0 chr1 12336581 . A . PASS END=12336581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr1 12336582 . G . PASS END=12336593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1319:0,80,255:36,0 chr1 12336594 . C . PASS END=12336594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:34,0 chr1 12336595 . A . PASS END=12336713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1296:0,85,255:40,0 chr1 12336714 . T . PASS END=12336714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 12336715 . A . PASS END=12336785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:36:0,80,1272:0,80,255:39,0 chr1 12336786 . G . PASS END=12336786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:30,0 chr1 12336787 . A . PASS END=12336792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:34,0 chr1 12336793 . G . PASS END=12336793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,2 chr1 12336794 . C . PASS END=12336795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1205:0,42,255:34,2 chr1 12336796 . C . PASS END=12336796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr1 12336797 . A . PASS END=12336917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:35:0,81,1215:0,83,255:40,0 chr1 12336918 . C . PASS END=12336918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:33,0 chr1 12336919 . C . PASS END=12336967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,92,255:38,0 chr1 12336968 . A . PASS END=12336968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 12336969 . T . PASS END=12336971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 12336972 . T . PASS END=12336972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:26,0 chr1 12336973 . T . PASS END=12336979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1133:0,80,255:32,0 chr1 12336980 . T . PASS END=12336980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1092:0,38,255:29,0 chr1 12336981 . T . PASS END=12336985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:31,0 chr1 12336986 . T . PASS END=12336986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 12336987 . C . PASS END=12337004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,94,255:33,0 chr1 12337005 . G . PASS END=12337005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:29,0 chr1 12337006 . G . PASS END=12337016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 12337017 . T . PASS END=12337017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 12337018 . T . PASS END=12337055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1172:0,88,255:34,0 chr1 12337056 . A . PASS END=12337057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:35:0,72,1263:0,72,255:34,0 chr1 12337058 . G . PASS END=12337059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1303:0,40,255:35,0 chr1 12337060 . C . PASS END=12337556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:36:0,86,1214:0,86,255:40,0 chr1 12337557 . G . PASS END=12337557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1309:0,78,255:35,0 chr1 12337558 . T . PASS END=12337570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,99,1443:0,117,255:39,0 chr1 12337571 . A . PASS END=12337571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 12337572 . A . PASS END=12338048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:33:0,80,1260:0,80,255:40,0 chr1 12338049 . T . PASS END=12338074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,945:0,62,255:26,0 chr1 12338075 . A . PASS END=12338075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 12338076 . A . PASS END=12338076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 12338077 . T . PASS END=12338082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:19,0 chr1 12338083 . C . PASS END=12338090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 12338091 . T . PASS END=12338091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:17,0 chr1 12338092 . C . PASS END=12338095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:17,0 chr1 12339556 . C . PASS END=12339691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:39:0,89,1437:0,89,255:40,0 chr1 12339692 . T . PASS END=12339692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:57:49:0,57,1238:0,57,255:40,0 chr1 12339693 . G . PASS END=12339707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,130,255:40,0 chr1 12342762 . G . PASS END=12343351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:31:0,85,1132:0,85,255:40,0 chr1 12343352 . A . PASS END=12343352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1481:0,79,255:39,0 chr1 12343353 . G . PASS END=12343748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:37:0,84,1260:0,91,255:40,0 chr1 12343749 . G . PASS END=12343771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 12343772 . G . PASS END=12343781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:19,0 chr1 12343782 . C . PASS END=12343782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 12343783 . T . PASS END=12343793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,697:0,47,255:19,0 chr1 12348280 . G . PASS END=12348370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,102,1582:0,102,255:40,0 chr1 12351055 . A . PASS END=12351130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,785:0,61,255:26,0 chr1 12351131 . A . PASS END=12351131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr1 12351132 . G . PASS END=12351132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 12351133 . A . PASS END=12351137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:16,0 chr1 12351138 . T . PASS END=12351151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:14:0,30,450:0,42,255:13,0 chr1 12351152 . T . PASS END=12351181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:20:7:0,20,219:0,20,219:9,0 chr1 12353581 . A . PASS END=12353583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:18,0 chr1 12353584 . C . PASS END=12353603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,909:0,66,255:26,0 chr1 12353604 . T . PASS END=12353604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 12353605 . C . PASS END=12353611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 12353612 . G . PASS END=12353612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 12353613 . A . PASS END=12353613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:27,0 chr1 12353614 . A . PASS END=12353615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 12353616 . A . PASS END=12353616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12353617 . C . PASS END=12353622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 12353623 . T . PASS END=12353623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 12353624 . C . PASS END=12353646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 12353647 . T . PASS END=12353647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 12353648 . G . PASS END=12353727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:36,0 chr1 12353728 . A . PASS END=12353728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 12353729 . G . PASS END=12353729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 12353730 . G . PASS END=12353733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr1 12353734 . C . PASS END=12353741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:27,0 chr1 12353742 . C . PASS END=12353756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:24,0 chr1 12353757 . A . PASS END=12353761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 12359259 . G . PASS END=12359270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:24,0 chr1 12359271 . G . PASS END=12359272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12359273 . C . PASS END=12359278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 12359279 . C . PASS END=12359441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:29:0,81,1209:0,86,255:40,0 chr1 12364563 . G . PASS END=12364604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1094:0,82,255:39,0 chr1 12364605 . A . PASS END=12364605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:38,0 chr1 12364606 . G . PASS END=12364774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:35:0,93,1395:0,104,255:40,0 chr1 12364775 . C . PASS END=12364775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:31,0 chr1 12364776 . A . PASS END=12364783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1379:0,95,255:32,0 chr1 12364784 . A . PASS END=12364784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:29,0 chr1 12364785 . G . PASS END=12364785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 12368488 . A . PASS END=12368493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,923:0,64,255:26,0 chr1 12368494 . A . PASS END=12368496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12368497 . T . PASS END=12368497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 12368498 . C . PASS END=12368499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12368500 . G . PASS END=12368508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:25,0 chr1 12368509 . A . PASS END=12368510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 12368511 . T . PASS END=12368511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,897:0,48,255:28,0 chr1 12368512 . G . PASS END=12368514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 12368515 . T . PASS END=12368516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 12368517 . G . PASS END=12368655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:33:0,88,1128:0,88,255:40,0 chr1 12368656 . A . PASS END=12368656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,99,1485:0,132,255:33,0 chr1 12368657 . G . PASS END=12368657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:54:45:0,54,1299:0,54,255:31,0 chr1 12368658 . C . PASS END=12368668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:38:0,90,1395:0,90,255:34,0 chr1 12368669 . G . PASS END=12368669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1127:0,64,255:29,0 chr1 12368670 . A . PASS END=12368676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,102,255:31,0 chr1 12368677 . A . PASS END=12368679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,85,255:26,0 chr1 12368680 . T . PASS END=12368680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1142:0,53,255:26,0 chr1 12368681 . G . PASS END=12368682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1099:0,60,255:27,0 chr1 12368683 . A . PASS END=12368683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 12368684 . A . PASS END=12368684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:25,0 chr1 12368685 . A . PASS END=12368685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,92,255:26,0 chr1 12368686 . G . PASS END=12368686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,92,255:25,0 chr1 12368687 . G . PASS END=12368687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1113:0,52,255:25,0 chr1 12368688 . A . PASS END=12368693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,1035:0,66,255:25,0 chr1 12368694 . G . PASS END=12368694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1117:0,50,255:21,0 chr1 12368695 . A . PASS END=12368695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,102,255:22,0 chr1 12368696 . C . PASS END=12368696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1066:0,46,255:20,0 chr1 12368697 . A . PASS END=12368698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,990:0,82,255:21,0 chr1 12371511 . A . PASS END=12371682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:27:0,81,964:0,81,255:40,1 chr1 12371870 . A . PASS END=12371870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 12371871 . C . PASS END=12371872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 12371873 . G . PASS END=12371982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,104,1437:0,104,255:40,0 chr1 12374172 . A . PASS END=12374172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 12374173 . T . PASS END=12374192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,732:0,63,255:23,0 chr1 12374193 . A . PASS END=12374193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,628:0,55,255:22,0 chr1 12374194 . C . PASS END=12374203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 12374204 . A . PASS END=12374204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 12374205 . A . PASS END=12374211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 12374212 . T . PASS END=12374212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 12374213 . C . PASS END=12374221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,853:0,65,255:26,0 chr1 12374222 . C . PASS END=12374232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 12374233 . A . PASS END=12374247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,858:0,67,255:27,0 chr1 12374248 . T . PASS END=12374248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 12374249 . C . PASS END=12374249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,931:0,57,255:27,0 chr1 12374250 . C . PASS END=12374250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 12374251 . A . PASS END=12374251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 12374252 . T . PASS END=12374252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12374253 . G . PASS END=12374254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr1 12374255 . T . PASS END=12374255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 12374256 . G . PASS END=12374256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 12374257 . G . PASS END=12374257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12374258 . C . PASS END=12374258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 12374259 . T . PASS END=12374263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:29,0 chr1 12374264 . A . PASS END=12374264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 12374265 . C . PASS END=12374265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 12374266 . A . PASS END=12374267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 12374268 . C . PASS END=12374268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 12374269 . C . PASS END=12374290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:28:0,65,1006:0,65,255:26,1 chr1 12374291 . G . PASS END=12374295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 12374296 . G . PASS END=12374296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 12374297 . G . PASS END=12374301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 12374302 . A . PASS END=12374302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 12374303 . C . PASS END=12374306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 12374307 . T . PASS END=12374307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 12374308 . G . PASS END=12374347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,992:0,80,255:32,0 chr1 12374348 . C . PASS END=12374361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,74,255:25,0 chr1 12374362 . A . PASS END=12374362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 12374363 . T . PASS END=12374379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 12374380 . T . PASS END=12374380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 12374381 . T . PASS END=12374384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 12378129 . A . PASS END=12378306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1071:0,80,255:40,0 chr1 12378307 . A . PASS END=12378307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 12378308 . A . PASS END=12378338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1215:0,89,255:35,0 chr1 12378339 . G . PASS END=12378343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 12378344 . C . PASS END=12378345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 12378346 . C . PASS END=12378346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 12378347 . T . PASS END=12378349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12378350 . C . PASS END=12378350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 12378351 . T . PASS END=12378363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 12378364 . A . PASS END=12378365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1014:0,68,255:26,0 chr1 12378366 . G . PASS END=12378366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12378367 . C . PASS END=12378367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 12378368 . A . PASS END=12378372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 12378373 . G . PASS END=12378380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 12378381 . G . PASS END=12378381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:24,0 chr1 12378382 . G . PASS END=12378393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr1 12378394 . G . PASS END=12378394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 12379554 . G . PASS END=12379554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 12379555 . T . PASS END=12379563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 12379564 . T . PASS END=12379672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1133:0,84,255:40,0 chr1 12379673 . T . PASS END=12379673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 12379674 . T . PASS END=12379687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:37:0,80,1312:0,80,255:37,0 chr1 12381866 . G . PASS END=12382021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:54:0,120,1800:0,132,255:40,0 chr1 12382593 . A . PASS END=12382599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,779:0,69,255:26,0 chr1 12382600 . T . PASS END=12382718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,980:0,81,255:40,0 chr1 12382719 . T . PASS END=12382719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:29,0 chr1 12382720 . C . PASS END=12382723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 12382724 . T . PASS END=12382724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:27,0 chr1 12382725 . G . PASS END=12382730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr1 12382731 . T . PASS END=12382732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 12382733 . C . PASS END=12382742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 12382743 . G . PASS END=12382761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,939:0,67,255:25,0 chr1 12382762 . A . PASS END=12382763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 12382764 . A . PASS END=12382771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 12382772 . A . PASS END=12382782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:18,0 chr1 12382783 . A . PASS END=12382803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr1 12383763 . A . PASS END=12383837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:35:0,99,1327:0,105,255:40,0 chr1 12387705 . G . PASS END=12387710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 12387711 . T . PASS END=12387711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 12387712 . G . PASS END=12387726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 12387727 . T . PASS END=12387727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:20,0 chr1 12387728 . T . PASS END=12387733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:24,0 chr1 12387734 . T . PASS END=12387734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 12387735 . T . PASS END=12387740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,773:0,72,255:25,0 chr1 12387741 . A . PASS END=12387741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 12387742 . T . PASS END=12387743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 12387744 . C . PASS END=12387744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr1 12387745 . G . PASS END=12387748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 12387749 . C . PASS END=12387753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12387754 . G . PASS END=12387755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 12387756 . A . PASS END=12387757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 12387758 . T . PASS END=12387758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,916:0,70,255:27,0 chr1 12387759 . C . PASS END=12387759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12387760 . T . PASS END=12387760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr1 12387761 . C . PASS END=12387761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 12387762 . T . PASS END=12387762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 12387763 . T . PASS END=12387763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12387764 . T . PASS END=12387764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:29,0 chr1 12387765 . C . PASS END=12387766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 12387767 . T . PASS END=12387767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:28,0 chr1 12387768 . T . PASS END=12387768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,996:0,51,255:29,0 chr1 12387769 . G . PASS END=12387769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 12387770 . G . PASS END=12387770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:28,0 chr1 12387771 . C . PASS END=12387771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 12387772 . C . PASS END=12387772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 12387773 . T . PASS END=12387773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr1 12387774 . C . PASS END=12387774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 12387775 . C . PASS END=12387775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 12387776 . A . PASS END=12387777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 12387778 . C . PASS END=12387778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr1 12387779 . A . PASS END=12387779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1105:0,82,255:31,0 chr1 12387780 . G . PASS END=12387782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:31,0 chr1 12387783 . G . PASS END=12387783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 12387784 . A . PASS END=12387787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1053:0,63,255:32,0 chr1 12387788 . A . PASS END=12387812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1141:0,89,255:34,0 chr1 12387813 . T . PASS END=12387813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1141:0,55,255:30,0 chr1 12387814 . G . PASS END=12387835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:35:0,83,1234:0,83,255:37,0 chr1 12387836 . G . PASS END=12387836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 12387837 . C . PASS END=12387841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,114,1376:0,114,255:40,0 chr1 12387842 . A . PASS END=12387842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1305:0,43,255:37,0 chr1 12387843 . G . PASS END=12387869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:42:0,87,1399:0,87,255:40,0 chr1 12387870 . G . PASS END=12387870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:40,0 chr1 12387871 . C . PASS END=12387871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:85:44:0,85,1535:0,85,255:39,0 chr1 12387872 . A . PASS END=12387872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1468:0,77,255:39,0 chr1 12387873 . T . PASS END=12387875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:44:0,93,1576:0,93,255:40,0 chr1 12387876 . A . PASS END=12387876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:39,0 chr1 12387877 . T . PASS END=12387877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1529:0,90,255:39,0 chr1 12387878 . T . PASS END=12387878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:38,0 chr1 12387879 . G . PASS END=12387883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:42:0,87,1462:0,87,255:39,0 chr1 12387884 . G . PASS END=12387884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1473:0,71,255:35,0 chr1 12387885 . T . PASS END=12387885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:43:0,91,1558:0,91,255:37,0 chr1 12387886 . T . PASS END=12387886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:36,0 chr1 12387887 . C . PASS END=12387891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:81:40:0,81,1354:0,81,255:37,0 chr1 12387892 . C . PASS END=12387898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1305:0,75,255:32,0 chr1 12387899 . C . PASS END=12387899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 12387900 . T . PASS END=12387900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:30,0 chr1 12387901 . C . PASS END=12387911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:32,0 chr1 12389886 . G . PASS END=12389946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:37:0,95,1305:0,95,255:40,0 chr1 12389947 . T . PASS END=12389947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:43:41:0,43,1302:0,43,255:34,0 chr1 12389948 . G . PASS END=12389964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:39:0,84,1308:0,84,255:38,0 chr1 12389965 . T . PASS END=12389965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1247:0,42,255:32,0 chr1 12389966 . G . PASS END=12389975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1311:0,95,255:35,0 chr1 12393283 . G . PASS END=12393289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 12393290 . G . PASS END=12393300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 12393301 . A . PASS END=12393312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,531:0,42,255:17,0 chr1 12393313 . G . PASS END=12393321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,752:0,60,255:25,0 chr1 12393322 . C . PASS END=12393322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 12393323 . C . PASS END=12393334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 12393335 . G . PASS END=12393341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:29,0 chr1 12393342 . A . PASS END=12393342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 12393343 . G . PASS END=12393347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12393348 . C . PASS END=12393348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 12393349 . T . PASS END=12393350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12393351 . C . PASS END=12393351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 12393352 . A . PASS END=12393352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12393353 . T . PASS END=12393353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 12393354 . C . PASS END=12393361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1072:0,90,255:30,0 chr1 12393362 . A . PASS END=12393362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 12393363 . C . PASS END=12393374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 12393375 . G . PASS END=12393375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 12393376 . C . PASS END=12393377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12393378 . A . PASS END=12393378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr1 12393379 . A . PASS END=12393400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 12393401 . C . PASS END=12393422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 12393423 . G . PASS END=12393423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 12395762 . A . PASS END=12395765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 12395766 . G . PASS END=12395774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,948:0,81,255:30,0 chr1 12395775 . T . PASS END=12395775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 12395776 . A . PASS END=12395790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:30,0 chr1 12395791 . A . PASS END=12395791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 12395792 . T . PASS END=12395807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:32,0 chr1 12395808 . A . PASS END=12395808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:31,0 chr1 12395809 . G . PASS END=12395842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1185:0,80,255:36,0 chr1 12395843 . A . PASS END=12395843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:34,0 chr1 12395844 . C . PASS END=12395870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1280:0,92,255:36,0 chr1 12395871 . A . PASS END=12395871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,1008:0,32,255:28,0 chr1 12395872 . T . PASS END=12395881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 12395882 . A . PASS END=12395882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,951:0,40,255:25,0 chr1 12395883 . A . PASS END=12395884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 12398288 . G . PASS END=12398362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:32:0,84,1260:0,96,255:40,0 chr1 12401837 . C . PASS END=12401857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1297:0,108,255:37,0 chr1 12401858 . G . PASS END=12401858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1317:0,73,255:36,0 chr1 12401859 . C . PASS END=12401867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1390:0,111,255:38,0 chr1 12401868 . A C, 160.43 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,22,0:0,16,0:110:198,113,0,298,298,298:255,114,0:0,0:1.6043e+02,1.1043e+02,0.0000e+00,2.9520e+02,3.2997e+02,2.9821e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,19:0,0,17,21 chr1 12401869 . T . PASS END=12401905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1402:0,98,255:40,0 chr1 12401906 . C . PASS END=12401937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1260:0,109,255:40,0 chr1 12401938 . A . PASS END=12401942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:70:33:0,70,1125:0,70,255:27,0 chr1 12402956 . A . PASS END=12402959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,817:0,72,255:26,0 chr1 12402960 . G . PASS END=12402960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 12402961 . C . PASS END=12402964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 12402965 . C . PASS END=12403108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:33:0,83,1170:0,83,255:40,0 chr1 12405431 . A . PASS END=12405432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,898:0,72,255:24,0 chr1 12405433 . A . PASS END=12405433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:22,0 chr1 12405434 . C . PASS END=12405436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:29,0 chr1 12405437 . C . PASS END=12405438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 12405439 . A . PASS END=12405439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 12405440 . T . PASS END=12405566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1016:0,81,255:40,0 chr1 12406662 . A . PASS END=12406709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:96:61:0,96,1560:0,96,255:40,0 chr1 12408880 . T . PASS END=12408883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 12408884 . C . PASS END=12408884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12408885 . T . PASS END=12408887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 12408888 . A . PASS END=12409030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:33:0,90,1313:0,95,255:40,0 chr1 12409221 . A . PASS END=12409221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12409222 . G . PASS END=12409222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 12409223 . C . PASS END=12409224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12409225 . A . PASS END=12409225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 12409226 . G . PASS END=12409236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 12409237 . T . PASS END=12409237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 12409238 . G . PASS END=12409249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1066:0,87,255:31,0 chr1 12409250 . G . PASS END=12409251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 12409252 . G . PASS END=12409403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,84,255:40,0 chr1 12409404 . T . PASS END=12409408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:31:0,63,945:0,93,255:26,0 chr1 12409409 . A . PASS END=12409412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,74,255:19,0 chr1 12409413 . A . PASS END=12409431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,870:0,72,255:24,0 chr1 12414031 . G . PASS END=12414054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,818:0,61,255:25,0 chr1 12414055 . G . PASS END=12414055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12414056 . A . PASS END=12414059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12414060 . A . PASS END=12414063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 12414064 . A . PASS END=12414064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr1 12414065 . G . PASS END=12414255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:36:0,90,1283:0,97,255:40,0 chr1 12414256 . T . PASS END=12414274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,68,255:25,0 chr1 12414275 . C . PASS END=12414278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:25:0,48,720:0,75,255:16,0 chr1 12415956 . G . PASS END=12415970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr1 12415971 . A . PASS END=12415995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,498:0,42,255:19,0 chr1 12415996 . C . PASS END=12415996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 12415997 . A . PASS END=12416022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,690:0,57,255:19,0 chr1 12416023 . G . PASS END=12416026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 12416027 . A . PASS END=12416027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 12416028 . G . PASS END=12416034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 12416035 . A . PASS END=12416035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 12416036 . C . PASS END=12416040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 12416041 . T . PASS END=12416041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 12416042 . G . PASS END=12416068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,901:0,72,255:25,0 chr1 12416069 . A . PASS END=12416069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 12416070 . C . PASS END=12416071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,812:0,75,255:25,0 chr1 12416072 . A . PASS END=12416072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:24,0 chr1 12416073 . T . PASS END=12416095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:25,0 chr1 12416096 . G . PASS END=12416101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 12416102 . T . PASS END=12416109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,687:0,63,255:21,0 chr1 12416110 . C . PASS END=12416147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,615:0,41,255:19,0 chr1 12416455 . G . PASS END=12416474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 12416475 . C . PASS END=12416475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 12416476 . A . PASS END=12416476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 12416477 . G . PASS END=12416507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1112:0,80,255:40,0 chr1 12416508 . T . PASS END=12416508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1220:0,76,255:38,0 chr1 12416509 . T . PASS END=12416560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:32:0,90,1350:0,96,255:40,0 chr1 12416561 . T . PASS END=12416561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 12416562 . G . PASS END=12416569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1127:0,93,255:31,0 chr1 12416570 . G . PASS END=12416571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 12416572 . A . PASS END=12416579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 12416580 . C . PASS END=12416581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 12418515 . C . PASS END=12418650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,90,255:40,0 chr1 12418651 . A . PASS END=12418657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,83,255:26,0 chr1 12422776 . G . PASS END=12422906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:37:0,101,1307:0,101,255:40,0 chr1 12423128 . G . PASS END=12423303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,92,255:40,0 chr1 12428523 . G . PASS END=12428646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1233:0,86,255:40,0 chr1 12429522 . G . PASS END=12429522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12429523 . T . PASS END=12429526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12429527 . G . PASS END=12429527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 12429528 . G . PASS END=12429757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:30:0,87,1186:0,89,255:40,0 chr1 12433805 . C . PASS END=12433913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:31:0,90,1142:0,92,255:40,0 chr1 12438482 . G . PASS END=12438484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 12438485 . C . PASS END=12438485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 12438486 . C . PASS END=12438494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,599:0,41,255:19,0 chr1 12438495 . G . PASS END=12438502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:23,0 chr1 12438503 . C . PASS END=12438503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 12438504 . T . PASS END=12438530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:24,0 chr1 12438531 . T . PASS END=12438531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 12438532 . G . PASS END=12438550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,976:0,68,255:26,0 chr1 12438551 . G . PASS END=12438551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 12438552 . T . PASS END=12438553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 12438554 . C . PASS END=12438568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,944:0,81,255:29,0 chr1 12438569 . A . PASS END=12438569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 12438570 . A . PASS END=12438585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 12438586 . C . PASS END=12438602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:22:0,63,831:0,63,255:26,0 chr1 12438603 . C . PASS END=12438603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 12438604 . C . PASS END=12438609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 12438610 . A . PASS END=12438638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 12438639 . A . PASS END=12438639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:14,0 chr1 12438640 . C . PASS END=12438645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:16,0 chr1 12439542 . A . PASS END=12439544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1202:0,96,255:32,0 chr1 12439545 . C . PASS END=12439545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:31,0 chr1 12439546 . G . PASS END=12439624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1152:0,89,255:37,0 chr1 12439625 . G . PASS END=12439637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:26:0,63,945:0,78,255:25,0 chr1 12439638 . G . PASS END=12439638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 12439639 . T . PASS END=12439639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 12439640 . T . PASS END=12439650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:21:0,42,630:0,63,255:17,0 chr1 12443035 . G . PASS END=12443206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:36:0,96,1321:0,100,255:40,0 chr1 12443207 . C . PASS END=12443214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:34:0,69,1035:0,92,255:26,0 chr1 12445319 . A . PASS END=12445432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,151,255:40,0 chr1 12446244 . G . PASS END=12446393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:39:0,96,1440:0,116,255:40,0 chr1 12460238 . G . PASS END=12460239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 12460240 . G . PASS END=12460240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 12460241 . G . PASS END=12460241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12460242 . A . PASS END=12460248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12460249 . G . PASS END=12460250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 12460251 . T . PASS END=12460251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 12460252 . C . PASS END=12460378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1260:0,88,255:40,0 chr1 12460379 . A . PASS END=12460387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,96,255:26,0 chr1 12461661 . C . PASS END=12461757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:49:0,120,1800:0,141,255:40,0 chr1 12462621 . A . PASS END=12462640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,252,255:40,0 chr1 12463878 . A . PASS END=12464015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:43:0,102,1530:0,116,255:40,0 chr1 12464016 . T . PASS END=12464026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:37:0,66,990:0,83,255:26,0 chr1 12475140 . G . PASS END=12475266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1189:0,93,255:40,0 chr1 12475267 . T . PASS END=12475267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 12475268 . C . PASS END=12475270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 12475271 . G . PASS END=12475272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 12475273 . A . PASS END=12475274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 12476713 . G . PASS END=12476868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:39:0,90,1343:0,90,255:40,0 chr1 12476869 . T . PASS END=12476869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:31,0 chr1 12476870 . C . PASS END=12476880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:32,0 chr1 12513895 . G . PASS END=12513897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1349:0,95,255:36,0 chr1 12513898 . A . PASS END=12513898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr1 12513899 . C . PASS END=12513936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:38:0,85,1378:0,85,255:40,0 chr1 12516054 . T . PASS END=12516054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,812:0,67,255:26,0 chr1 12516055 . T . PASS END=12516176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1133:0,80,255:39,0 chr1 12516177 . C . PASS END=12516186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,74,255:25,0 chr1 12520256 . G . PASS END=12520256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 12520257 . T . PASS END=12520257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 12520258 . A . PASS END=12520261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 12520262 . T . PASS END=12520276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,711:0,66,255:24,0 chr1 12520277 . G . PASS END=12520326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1156:0,87,255:37,0 chr1 12520327 . G . PASS END=12520327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 12520328 . G . PASS END=12520370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,95,255:38,0 chr1 12520371 . C . PASS END=12520375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 12520376 . C . PASS END=12520376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12520377 . A . PASS END=12520416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 12520417 . G . PASS END=12520428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:17,0 chr1 12520429 . A . PASS END=12520451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 12557554 . G . PASS END=12557566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 12557567 . A . PASS END=12557567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 12557568 . G . PASS END=12557655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1103:0,90,255:40,0 chr1 12557656 . C . PASS END=12557656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr1 12557657 . A . PASS END=12557684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1202:0,83,255:33,0 chr1 12557685 . T . PASS END=12557685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 12566907 . C . PASS END=12566910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 12566911 . A . PASS END=12566911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:29,0 chr1 12566912 . T . PASS END=12567083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:31:0,93,1170:0,93,255:40,0 chr1 12567084 . C . PASS END=12567085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:33,0 chr1 12567086 . A . PASS END=12567100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:33,0 chr1 12567101 . C . PASS END=12567136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,853:0,66,255:26,0 chr1 12567137 . A . PASS END=12567147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,47,255:19,0 chr1 12568947 . G . PASS END=12569024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1140:0,83,255:40,0 chr1 12569025 . C . PASS END=12569025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:30,0 chr1 12569026 . A . PASS END=12569047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1056:0,82,255:32,0 chr1 12569048 . A . PASS END=12569048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 12569049 . A . PASS END=12569058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,83,255:27,0 chr1 12569059 . A . PASS END=12569059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 12569060 . G . PASS END=12569064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12569065 . A . PASS END=12569078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,931:0,64,255:26,0 chr1 12628358 . T . PASS END=12628421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,147,255:40,0 chr1 12628422 . G . PASS END=12628453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,119,1794:0,119,255:40,0 chr1 12632756 . C . PASS END=12632881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:37:0,84,1312:0,84,255:40,0 chr1 12638746 . C . PASS END=12638746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 12638747 . T . PASS END=12638747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 12638748 . G . PASS END=12638749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 12638750 . C . PASS END=12638777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:13,0 chr1 12638778 . G . PASS END=12638806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 12638807 . T . PASS END=12638809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 12638810 . C . PASS END=12638858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:19,0 chr1 12638859 . G . PASS END=12638870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 12638871 . G . PASS END=12638871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 12638872 . G . PASS END=12638912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 12638913 . C . PASS END=12638926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 12638927 . G . PASS END=12638963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 12638964 . T C, 98.17 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,10,0:0,7,0:48:136,51,0,659,51,659:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,12:0,0,12,5 chr1 12638965 . G . PASS END=12638970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 12638971 . A . PASS END=12638977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 12638978 . T . PASS END=12638984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:12:0,27,405:0,36,255:9,0 chr1 12639321 . C . PASS END=12639346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:43:0,90,1521:0,90,255:40,0 chr1 12639347 . G . PASS END=12639438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:37:0,95,1357:0,95,255:40,0 chr1 12639439 . A . PASS END=12639439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:33,0 chr1 12639440 . C . PASS END=12639440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 12640551 . C . PASS END=12640551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 12640552 . T . PASS END=12640552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 12640553 . T . PASS END=12640555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 12640556 . C . PASS END=12640558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 12640559 . G . PASS END=12640559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 12640560 . G . PASS END=12640669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,978:0,81,255:40,0 chr1 12640670 . T . PASS END=12640670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1115:0,72,255:28,0 chr1 12640671 . C . PASS END=12640679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,86,255:31,0 chr1 12640680 . G . PASS END=12640694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:64:27:0,64,923:0,64,255:25,0 chr1 12677159 . C . PASS END=12677180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 12677181 . A . PASS END=12677181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 12677182 . A . PASS END=12677208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,562:0,48,255:19,0 chr1 12677209 . C . PASS END=12677304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,726:0,66,255:25,0 chr1 12677305 . T . PASS END=12677305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 12677306 . C . PASS END=12677308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 12677309 . C . PASS END=12677309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 12677310 . T . PASS END=12677316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 12677317 . G . PASS END=12677342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,47,255:19,0 chr1 12677343 . T . PASS END=12677346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 12677347 . A . PASS END=12677353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:24:15:0,24,360:0,45,255:9,0 chr1 12704566 . A . PASS END=12704569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,831:0,65,255:26,0 chr1 12704570 . C . PASS END=12704572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:28,0 chr1 12704573 . T . PASS END=12704573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 12704574 . C . PASS END=12704711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:34:0,84,1235:0,102,255:40,0 chr1 12704712 . A . PASS END=12704733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:25:0,61,854:0,61,255:24,0 chr1 12711142 . G . PASS END=12711338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:31:0,83,1191:0,83,255:40,0 chr1 12711339 . C . PASS END=12711353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:22:0,63,945:0,66,255:26,0 chr1 12711354 . C . PASS END=12711354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 12711355 . C . PASS END=12711355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 12711356 . T . PASS END=12711356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 12711357 . G . PASS END=12711358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 12721802 . A . PASS END=12721865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,122,255:40,0 chr1 12725972 . G . PASS END=12726077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,89,255:39,0 chr1 12726078 . A . PASS END=12726083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:30:0,75,1125:0,83,255:26,0 chr1 12726084 . G . PASS END=12726084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:25,0 chr1 12726085 . T . PASS END=12726128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,984:0,72,255:26,0 chr1 12726129 . A . PASS END=12726146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:33,0 chr1 12726147 . A . PASS END=12726147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1176:0,69,255:28,0 chr1 12726148 . G . PASS END=12726162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:31:0,86,1164:0,86,255:31,0 chr1 12726163 . G . PASS END=12726163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 12726164 . G . PASS END=12726491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1186:0,83,255:40,0 chr1 12726492 . T . PASS END=12726492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:34,0 chr1 12726493 . C . PASS END=12726510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,92,255:36,0 chr1 12726511 . A . PASS END=12726511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:29,0 chr1 12726512 . T . PASS END=12726512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 12726513 . G . PASS END=12726513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 12726514 . A . PASS END=12726518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr1 12726519 . A . PASS END=12726519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 12726520 . T . PASS END=12726530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 12726531 . C . PASS END=12726531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 12726532 . C . PASS END=12726550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 12726551 . C . PASS END=12726551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 12726552 . T . PASS END=12726554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 12726555 . G . PASS END=12726556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 12726557 . G . PASS END=12726583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,89,255:34,0 chr1 12726584 . G . PASS END=12726584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:32,0 chr1 12726585 . C . PASS END=12726746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:84:38:0,84,1236:0,84,255:40,2 chr1 12776180 . A . PASS END=12776217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,120,1800:0,141,255:40,0 chr1 12776218 . A C, 239.16 PASS DP=64;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,33,0:0,31,0:189:277,192,0,2444,192,2444:255,193,0:0,0:2.3916e+02,1.8916e+02,0.0000e+00,4.5000e+02,2.2393e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,29:0,0,32,32 chr1 12776219 . G . PASS END=12776255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,179,255:40,0 chr1 12776256 . G . PASS END=12776306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,167,255:40,0 chr1 12776307 . T . PASS END=12776343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:40:0,84,1451:0,84,255:40,0 chr1 12776344 . A T, 166.46 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,18,0:0,22,0:116:204,119,0,1470,119,1470:255,120,0:0,0:1.6646e+02,1.1646e+02,0.0000e+00,4.5000e+02,1.5123e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,22:0,0,16,24 chr1 12776345 . T . PASS END=12776347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 12779477 . G . PASS END=12779522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,116,1628:0,116,255:40,0 chr1 12779523 . T . PASS END=12779559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,120,1800:0,120,255:40,0 chr1 12779560 . T C,A, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.852;ReadPosRankSum=2.868;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,24,1,0:0.511,0.021,0.000:47:8,11,1,0:14,13,0,0:48:85,0,50,845,751,836,855,765,1605,1619:255,0,255:20,0:5.0000e+01,6.5492e-05,5.2931e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:9,13,10,15:9,13,9,16 chr1 12779561 . C . PASS END=12779617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:40:0,90,1350:0,106,255:40,0 chr1 12779618 . T C, 46.50 PASS DP=40;MQ=250.00;MQRankSum=5.287;ReadPosRankSum=2.471;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,16,0:0.400,0.000:40:9,8,0:15,8,0:46:81,0,50,558,856,1414:255,0,255:18,0:4.6501e+01,1.1908e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,18,9,7:13,11,7,9 chr1 12779619 . C . PASS END=12779643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,94,255:35,0 chr1 12779644 . G . PASS END=12779644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:28,0 chr1 12779645 . C . PASS END=12779648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 12779649 . G . PASS END=12779655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,70,255:26,0 chr1 12779656 . G . PASS END=12779656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 12779657 . T . PASS END=12779659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 12779660 . T . PASS END=12779664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:21,0 chr1 12779665 . C . PASS END=12779665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 12779666 . G . PASS END=12779671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:23,0 chr1 12779672 . G . PASS END=12779693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:40:19:0,40,436:0,40,255:19,0 chr1 12780885 . A . PASS END=12780894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1240:0,92,255:35,0 chr1 12780895 . T . PASS END=12780895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1145:0,58,255:32,0 chr1 12780896 . G . PASS END=12780904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1360:0,100,255:40,0 chr1 12780905 . T . PASS END=12780905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:34:40:0,34,1176:0,34,255:37,0 chr1 12780906 . C . PASS END=12780948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:35:0,86,1145:0,86,255:40,0 chr1 12785189 . T . PASS END=12785190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 12785191 . A . PASS END=12785191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 12785192 . C . PASS END=12785195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 12785196 . A . PASS END=12785196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 12785197 . A . PASS END=12785233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:25,0 chr1 12785234 . C . PASS END=12785236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:29,0 chr1 12785237 . C . PASS END=12785237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 12785238 . T . PASS END=12785245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 12785246 . C . PASS END=12785246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 12785247 . A . PASS END=12785253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 12785254 . A . PASS END=12785254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 12785255 . C . PASS END=12785256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12785257 . T . PASS END=12785257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 12785258 . C . PASS END=12785261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 12785262 . A . PASS END=12785262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 12785263 . A . PASS END=12785264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 12785265 . T . PASS END=12785266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 12785267 . C . PASS END=12785269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 12785270 . G . PASS END=12785270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 12785271 . G . PASS END=12785271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 12785272 . A . PASS END=12785272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:27,0 chr1 12785273 . T . PASS END=12785292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1166:0,80,255:33,0 chr1 12785293 . C . PASS END=12785293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1224:0,58,255:28,0 chr1 12785294 . C . PASS END=12785396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1122:0,88,255:37,0 chr1 12785397 . C . PASS END=12785397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 12785398 . T . PASS END=12785456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:38:0,95,1296:0,95,255:40,0 chr1 12785457 . A . PASS END=12785493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:44:0,102,1572:0,102,255:40,0 chr1 12785494 . G T, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=4.971;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,24,0:0.533,0.000:45:7,14,0:14,10,0:48:85,0,50,841,722,1562:255,0,255:20,1:5.0000e+01,6.7563e-05,5.2564e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,13,11:14,7,11,13 chr1 12785495 . T . PASS END=12785531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,99,1562:0,99,255:40,0 chr1 12785532 . G . PASS END=12785963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1250:0,84,255:40,0 chr1 12806379 . A . PASS END=12806379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1394:0,66,255:39,0 chr1 12806380 . T . PASS END=12806489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:86:44:0,86,1517:0,86,255:40,0 chr1 12815650 . T . PASS END=12815763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1119:0,81,255:40,0 chr1 12819243 . G . PASS END=12819420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:48:0,117,1737:0,117,255:40,0 chr1 12820703 . C . PASS END=12820703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 12820704 . T . PASS END=12820704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr1 12820705 . C . PASS END=12820709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:26,0 chr1 12820710 . T . PASS END=12820710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:25,0 chr1 12820711 . A . PASS END=12820711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 12820712 . C . PASS END=12820717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,825:0,81,255:31,0 chr1 12820718 . A . PASS END=12820718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,910:0,60,255:29,0 chr1 12820719 . T . PASS END=12820818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1097:0,83,255:38,0 chr1 12820819 . A . PASS END=12820832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:28:0,75,1125:0,84,255:26,0 chr1 12820833 . G . PASS END=12820850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 12820851 . T . PASS END=12820851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 12820852 . C . PASS END=12820852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 12820853 . C . PASS END=12820853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 12820854 . C . PASS END=12820856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 12820857 . T . PASS END=12820857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 12820858 . C . PASS END=12820860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 12820861 . C . PASS END=12820869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 12820870 . T C, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.940;ReadPosRankSum=2.758;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,11,0:0.500,0.000:22:3,3,0:8,8,0:48:85,0,50,393,364,757:255,0,255:10,0:5.0000e+01,6.5233e-05,5.3000e+01,3.9343e+02,3.9848e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,4,7:4,7,8,3 chr1 12820871 . T . PASS END=12820884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 12835011 . A . PASS END=12835023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 12835024 . C . PASS END=12835034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 12835035 . C . PASS END=12835050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 12835051 . A . PASS END=12835051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 12835052 . G . PASS END=12835058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 12835059 . C . PASS END=12835072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 12835073 . G . PASS END=12835076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 12835077 . T . PASS END=12835077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 12835078 . T . PASS END=12835111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 12835112 . G . PASS END=12835114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 12835115 . C . LowGQ END=12835117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:15:0,0,465:0,0,255:16,2 chr1 12835118 . T . PASS END=12835145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 12835146 . A . PASS END=12835146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 12835147 . G . PASS END=12835171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,586:0,51,255:18,0 chr1 12835172 . T . PASS END=12835172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 12835173 . A . PASS END=12835173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 12835174 . T . PASS END=12835174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 12835175 . G . PASS END=12835176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 12835177 . T . PASS END=12835197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,488:0,39,255:13,0 chr1 12835198 . G . PASS END=12835200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 12835201 . T . PASS END=12835219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 12835220 . G . PASS END=12835220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 12835221 . A . PASS END=12835221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 12835222 . A . PASS END=12835232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 12835233 . C . PASS END=12835244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 12835245 . C . PASS END=12835245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 12835246 . G . PASS END=12835246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 12835247 . A . PASS END=12835248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 12835249 . C . PASS END=12835250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 12835251 . G . PASS END=12835251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 12835252 . T . PASS END=12835260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:7:0,18,270:0,21,227:6,0 chr1 12835261 . G . PASS END=12835261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 12835262 . G . PASS END=12835263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 12835264 . T . PASS END=12835264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 12835265 . T . PASS END=12835297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 12835686 . G . PASS END=12835686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 12835687 . C . PASS END=12835689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 12835690 . T . PASS END=12835690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,1 chr1 12835691 . G . PASS END=12835691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:34:23:0,34,742:0,34,255:20,1 chr1 12835692 . G . PASS END=12835692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 12835693 . A . PASS END=12835700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,785:0,66,255:23,0 chr1 12835701 . A . PASS END=12835702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:22,0 chr1 12835703 . T . PASS END=12835716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr1 12835717 . A . PASS END=12835717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 12835718 . A . PASS END=12835718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 12835719 . T . PASS END=12835719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 12835720 . G . PASS END=12835728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:24,0 chr1 12835729 . A . PASS END=12835729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:22,0 chr1 12835730 . A . PASS END=12835731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 12835732 . T . PASS END=12835732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 12835733 . T . PASS END=12835742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,832:0,72,255:24,0 chr1 12835743 . A . PASS END=12835743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:19,0 chr1 12835744 . T . PASS END=12835746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 12835747 . T . PASS END=12835756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 12835757 . C . PASS END=12835757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 12835758 . T . PASS END=12835761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 12835762 . C . PASS END=12835762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 12835763 . T . PASS END=12835763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 12835764 . C . PASS END=12835789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,590:0,40,255:19,0 chr1 12835790 . G . PASS END=12835802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 12835803 . C . PASS END=12835803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 12835804 . T . PASS END=12835823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,976:0,68,255:26,0 chr1 12835824 . G . PASS END=12835825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 12835826 . A . PASS END=12835828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 12835829 . C . PASS END=12835830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 12835831 . T . PASS END=12835834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 12835835 . T . PASS END=12835840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 12835841 . T . PASS END=12835862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 12835863 . T . PASS END=12835863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 12835864 . G . PASS END=12835867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 12835868 . T C, 137.29 PASS DP=30;MQ=242.41;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,13,0:0,17,0:87:175,90,0,1155,90,1155:255,90,0:0,0:1.3729e+02,8.7289e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,12:0,0,11,19 chr1 12835869 . G . PASS END=12835904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1150:0,90,255:37,0 chr1 12835905 . C . PASS END=12835905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr1 12835906 . A . PASS END=12836251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1181:0,84,255:40,0 chr1 12836252 . A . PASS END=12836261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,64,255:26,0 chr1 12837154 . G . PASS END=12837156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 12837157 . T . PASS END=12837194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,568:0,44,255:19,0 chr1 12837195 . G . PASS END=12837196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 12837197 . C . PASS END=12837205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 12837206 . G . PASS END=12837216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 12837217 . G . PASS END=12837242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,676:0,54,255:19,0 chr1 12837243 . T . PASS END=12837260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 12837261 . T . PASS END=12837277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,720:0,47,255:19,0 chr1 12837278 . A . PASS END=12837292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 12837293 . A . PASS END=12837293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 12837294 . G . PASS END=12837294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 12837295 . T . PASS END=12837295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 12837296 . C . PASS END=12837309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:24,0 chr1 12837310 . A . PASS END=12837310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 12837311 . G . PASS END=12837328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,901:0,75,255:26,0 chr1 12837329 . G . PASS END=12837330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 12837331 . G . PASS END=12837331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 12837332 . G . PASS END=12837333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 12837334 . C . PASS END=12837334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 12837335 . A . PASS END=12837531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1155:0,80,255:40,0 chr1 12837532 . T . PASS END=12837532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1406:0,79,255:36,0 chr1 12837533 . C . PASS END=12837564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:36:0,90,1319:0,90,255:39,0 chr1 12837565 . C . PASS END=12837565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr1 12837566 . T . PASS END=12837596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1294:0,89,255:34,0 chr1 12837597 . T . PASS END=12837612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1310:0,92,255:34,0 chr1 12837613 . G . PASS END=12837614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 12837615 . A . PASS END=12837633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 12837634 . T A, 137.29 PASS DP=30;MQ=168.51;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,15,0:0,15,0:87:175,90,0,1156,90,1163:255,90,0:0,0:1.3729e+02,8.7287e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,23:0,0,16,14 chr1 12837635 . A . PASS END=12837637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 12837638 . G . PASS END=12837639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 12837640 . G . PASS END=12837663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1202:0,83,255:31,0 chr1 12837664 . C . PASS END=12837664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 12837665 . T . PASS END=12837671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 12837672 . T . PASS END=12837672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 12837673 . C . PASS END=12837676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 12837677 . G . PASS END=12837687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:31:0,72,1080:0,80,255:26,0 chr1 12837688 . C . PASS END=12837694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 12837695 . C . PASS END=12837718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 12837719 . T . PASS END=12837742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,599:0,51,255:18,0 chr1 12853377 . A . PASS END=12853377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 12853378 . T . PASS END=12853378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1357:0,43,255:36,0 chr1 12853379 . G . PASS END=12853402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,114,1598:0,119,255:40,0 chr1 12853403 . A C, 43.49 PASS DP=49;MQ=70.91;MQRankSum=-2.750;ReadPosRankSum=3.147;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,20,0:0.417,0.000:48:12,5,0:16,15,0:43:78,0,48,686,973,1659:255,0,255:25,0:4.3488e+01,2.3169e-04,5.0650e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,8,8,12:16,12,9,11 chr1 12853404 . C . PASS END=12853414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr1 12853415 . A . PASS END=12853415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:28:48:0,28,1560:0,28,255:40,0 chr1 12853416 . G . PASS END=12853440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,140,255:40,0 chr1 12853441 . C . PASS END=12853663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:90:40:0,90,1350:0,120,255:40,0 chr1 12854064 . G . PASS END=12854089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,144,255:40,0 chr1 12854090 . T A, 24.82 PASS DP=66;MQ=46.19;MQRankSum=-5.636;ReadPosRankSum=0.803;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:45,20,0:0.308,0.000:65:27,7,0:18,13,0:25:60,0,43,700,1610,2317:255,0,255:40,0:2.4823e+01,1.4427e-02,4.6389e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,17,10,10:26,19,9,11:12854090 chr1 12854091 . G . PASS END=12854096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr1 12854097 . T C, 23.97 PASS DP=67;MQ=46.10;MQRankSum=-5.693;ReadPosRankSum=0.432;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:47,20,0:0.299,0.000:67:28,7,0:19,13,0:24:59,0,43,707,1586,2293:255,0,255:40,0:2.3966e+01,1.7561e-02,4.6393e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,17,11,9:23,24,10,10:12854090 chr1 12854098 . G . PASS END=12854104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,187,255:40,0 chr1 12854105 . A G, 22.20 PASS DP=69;MQ=46.31;MQRankSum=-5.747;ReadPosRankSum=-0.655;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:49,20,0:0.290,0.000:69:28,7,0:21,13,0:22:57,0,43,707,1752,2460:255,0,255:40,0:2.2196e+01,2.6374e-02,4.6401e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,19,12,8:25,24,9,11:12854090 chr1 12854106 . G . PASS END=12854161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,171,255:40,0 chr1 12854162 . C T, 1.62 DRAGENSnpHardQUAL DP=92;MQ=47.85;MQRankSum=-6.650;ReadPosRankSum=1.538;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:72,20,0:0.217,0.000:92:41,8,0:31,12,0:5:31,0,44,679,2538,3217:255,0,255:40,0:1.6244e+00,5.0580e+00,5.1808e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:44,28,8,12:39,33,10,10 chr1 12854163 . G . PASS END=12854187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:93:0,120,1800:0,244,255:40,0 chr1 12854188 . T C, 11.81 PASS DP=107;MQ=44.42;MQRankSum=-7.077;ReadPosRankSum=2.103;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:79,27,0:0.255,0.000:106:43,11,0:36,16,0:12:46,0,44,937,2752,3689:255,0,255:40,0:1.1806e+01,2.9654e-01,4.7047e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:49,30,11,16:47,32,13,14 chr1 12854189 . G . PASS END=12854225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,1:115:99:111:0,120,1800:0,255,255:40,0 chr1 12854226 . C . PASS END=12854318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:110:0,120,1800:0,255,255:40,0 chr1 12854319 . C . PASS END=12854355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:118:0,120,1800:0,255,255:40,0 chr1 12854356 . T C, 0.15 DRAGENSnpHardQUAL DP=117;MQ=55.08;MQRankSum=-7.013;ReadPosRankSum=5.675;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:96,20,0:0.172,0.000:116:51,11,0:45,9,0:15:20,0,45,678,3395,4073:255,0,255:40,0:1.4891e-01,1.4723e+01,6.2773e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:63,33,6,14:54,42,11,9 chr1 12854357 . A . PASS END=12854413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:98:0,120,1800:0,186,255:40,0 chr1 12854414 . G . LowGQ END=12854414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,12:102:0:102:0,0,2873:159,0,255:40,0 chr1 12854415 . C . PASS END=12854427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:99:0,120,1800:0,234,255:40,0 chr1 12854428 . C T, 42.68 PASS DP=104;MQ=61.07;MQRankSum=0.225;ReadPosRankSum=5.004;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:56,48,0:0.462,0.000:104:27,29,0:29,19,0:42:77,0,46,1691,1899,3590:255,0,255:40,0:4.2680e+01,2.9563e-04,4.8500e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,30,24,24:33,23,25,23 chr1 12854429 . C . PASS END=12854465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:90:0,120,1800:0,235,255:40,0 chr1 12854466 . G . PASS END=12854473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:82:0,120,1800:0,212,255:40,0 chr1 12854474 . A . PASS END=12854474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,5:82:53:82:0,53,2693:0,53,255:40,0 chr1 12854475 . T . PASS END=12854478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:80:0,120,1800:0,207,255:40,0 chr1 12854479 . C . PASS END=12854479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,5:80:47:80:0,47,2647:0,47,255:40,0 chr1 12854480 . G . PASS END=12854492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:80:0,120,1800:0,206,255:40,0 chr1 12854493 . C . PASS END=12854509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:82:0,120,1800:0,222,255:40,0 chr1 12854510 . A . PASS END=12854510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,7:86:17:86:0,17,2670:0,17,255:40,0 chr1 12854511 . C . PASS END=12854529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,177,255:40,0 chr1 12854530 . C G, 257.18 PASS DP=72;MQ=74.61;FractionInformativeReads=0.986 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,71,0:1.000,0.000:71:0,36,0:0,35,0:210:295,213,0,2715,213,2715:255,213,0:0,0:2.5718e+02,2.1023e+02,0.0000e+00,4.5000e+02,2.4500e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,38:0,0,36,35:12854530 chr1 12854531 . A . PASS END=12854543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:69:0,120,1800:0,175,255:40,0 chr1 12854544 . T C, 43.00 PASS DP=69;MQ=77.20;MQRankSum=-5.489;ReadPosRankSum=3.750;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:29,40,0:0.580,0.000:69:12,22,0:17,18,0:42:78,0,45,1397,1020,2418:255,0,255:29,0:4.3000e+01,2.8838e-04,4.7890e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,17,13,27:19,10,21,19:12854530 chr1 12854545 . G . PASS END=12854581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,172,255:40,0 chr1 12854582 . T . PASS END=12854642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,159,255:40,0 chr1 12854988 . A . PASS END=12855002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:88:70:0,88,1800:0,88,255:40,0 chr1 12855003 . G . LowGQ END=12855003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,17:73:0:73:0,0,1668:63,0,255:40,0 chr1 12855004 . C . PASS END=12855118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:73:0,104,1800:0,104,255:40,0 chr1 12884800 . T . PASS END=12884801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 12884802 . A . PASS END=12884802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 12884803 . A . PASS END=12884808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,676:0,41,255:18,0 chr1 12884809 . G . PASS END=12884830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:23,0 chr1 12884831 . T . PASS END=12884832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 12884833 . A . PASS END=12884849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,930:0,69,255:24,0 chr1 12884850 . G . PASS END=12885166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:83:29:0,83,1064:0,83,255:40,0 chr1 12885167 . A . PASS END=12885212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,886:0,72,255:25,0 chr1 12885213 . G . PASS END=12885213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 12885214 . C . PASS END=12885217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 12885218 . A . PASS END=12885222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,729:0,47,255:19,0 chr1 12885223 . G . PASS END=12885223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 12885224 . T . PASS END=12885230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,759:0,47,255:17,0 chr1 12885231 . T . PASS END=12885246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr1 12885247 . C . PASS END=12885251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 12885252 . C . PASS END=12885254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 12885255 . G . PASS END=12885261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr1 12885262 . T . PASS END=12885269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:7:0,21,271:0,21,255:7,0 chr1 12885270 . T . PASS END=12885282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,210:6,0 chr1 12885283 . C . PASS END=12885288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,164:3,0 chr1 12885289 . G T, 45.31 PASS DP=5;MQ=33.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,3,0:0,2,0:12:83,15,0,194,15,194:194,15,0:0,0:4.5312e+01,1.2312e+01,2.6307e-01,1.9114e+02,4.7082e+01,1.9414e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,5:0,0,2,3 chr1 12885290 . A . PASS END=12885310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr1 12885311 . A . PASS END=12885320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 12885321 . A . LowGQ END=12885324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:4:0,0,108:0,0,110:3,0 chr1 12885325 . A . PASS END=12885326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 12885327 . T . PASS END=12885342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 12885343 . T . LowGQ END=12885343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,70:5,0,74:3,0 chr1 12885344 . A . PASS END=12885351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 12885352 . C . LowGQ END=12885352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 12885353 . T . PASS END=12885361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 12887108 . C . PASS END=12887136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:34,0 chr1 12887137 . G . PASS END=12887137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr1 12887138 . A . PASS END=12887173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:34:0,93,1349:0,95,255:40,0 chr1 12887174 . C . LowGQ END=12887174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:0:45:0,0,1312:59,0,255:39,0 chr1 12887175 . G . PASS END=12887511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:98:45:0,98,1792:0,98,255:40,0 chr1 12887512 . G . PASS END=12887548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:73:0,120,1800:0,186,255:40,0 chr1 12887550 . C . PASS END=12887578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:74:0,120,1800:0,205,255:40,0 chr1 12887580 . T . PASS END=12887586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:77:0,120,1800:0,218,255:40,0 chr1 12887587 . C . PASS END=12887689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,162,255:40,0 chr1 12888357 . C . PASS END=12888372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr1 12888373 . G . PASS END=12888388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 12888389 . A C, 103.22 PASS DP=23;MQ=28.25;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,14,0:0,9,0:66:141,69,0,884,69,884:255,69,0:0,0:1.0322e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,8:0,0,16,7 chr1 12888390 . A . PASS END=12888397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,817:0,66,255:23,0 chr1 12888398 . G . PASS END=12888398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 12888399 . A . PASS END=12888404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 12888405 . G . PASS END=12888406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 12888407 . T . PASS END=12888407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 12888408 . T . PASS END=12888426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:31:0,92,1111:0,92,255:36,0 chr1 12888427 . G . PASS END=12888558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:37:0,96,1382:0,96,255:40,0 chr1 12888559 . C . PASS END=12888575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:90:66:0,90,1350:0,182,255:40,0 chr1 12888576 . A . PASS END=12888583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:63:64:0,63,945:0,176,255:26,0 chr1 12888584 . G . PASS END=12888586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:42:64:0,42,630:0,176,255:19,0 chr1 12888587 . C . PASS END=12888587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:36:61:0,36,540:0,183,255:12,0 chr1 12888588 . C . PASS END=12888588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:24:61:0,24,360:0,183,255:8,0 chr1 12888589 . T . PASS END=12888589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:18:61:0,18,270:0,183,255:6,0 chr1 12888590 . C . LowGQ END=12888600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:61,0:61:0:59:0,0,0:0,136,255:3,0 chr1 12888601 . G GC, 216.53 PASS DP=59;MQ=64.04;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,28,0:0,30,0:171:249,174,0,1972,175,1972:255,139,0:0,81:2.1653e+02,1.7148e+02,0.0000e+00,4.5000e+02,2.0627e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,28,30:0,0,22,36 chr1 12888602 . C . LowGQ END=12888602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,57:59:0:59:0,0,0:255,108,0:40,0 chr1 12888603 . C . PASS END=12888644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,113,1543:0,113,255:40,0 chr1 12888645 . T . PASS END=12888648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,111,1665:0,126,255:39,0 chr1 12907261 . T . PASS END=12907847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:66:0,109,1800:0,109,255:40,3 chr1 12907848 . G . PASS END=12907884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:69:0,120,1800:0,174,255:40,0 chr1 12907885 . T C, 247.85 PASS DP=68;MQ=64.76;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,36,0:0,32,0:201:286,204,0,2598,204,2598:255,205,0:0,0:2.4785e+02,2.0120e+02,0.0000e+00,4.5000e+02,2.3597e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,40:0,0,32,36 chr1 12907886 . G . PASS END=12907922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,124,255:40,0 chr1 12907923 . T . PASS END=12907959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:34:0,86,1202:0,86,255:40,0 chr1 12907960 . T . PASS END=12907960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:29,0 chr1 12907961 . T . PASS END=12907988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1146:0,85,255:36,0 chr1 12907989 . A . PASS END=12907989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1109:0,44,255:31,0 chr1 12907990 . G . PASS END=12907995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,92,255:29,0 chr1 12907996 . A . PASS END=12907997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 12907998 . G . PASS END=12907999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,95,255:27,0 chr1 12908000 . A . PASS END=12908026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,915:0,64,255:25,0 chr1 12908027 . T . PASS END=12908028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 12908029 . G . PASS END=12908051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:26,0 chr1 12908052 . A . PASS END=12908052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:24,0 chr1 12908053 . T . PASS END=12908066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,909:0,72,255:25,0 chr1 12908067 . G . PASS END=12908068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:21,0 chr1 12908069 . G . PASS END=12908106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:25,0 chr1 12908107 . G . PASS END=12908114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:56:24:0,56,855:0,56,255:20,0 chr1 12908115 . C . PASS END=12908117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 12908118 . T . PASS END=12908118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr1 12908119 . C . PASS END=12908120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr1 12908121 . T . PASS END=12908121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr1 12908122 . G . PASS END=12908128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 12908129 . A . PASS END=12908129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 12908130 . C . PASS END=12908135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 12908136 . T . PASS END=12908136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 12908137 . G . PASS END=12908137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 12908138 . G . PASS END=12908138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:19,0 chr1 12908139 . C . PASS END=12908142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:22,0 chr1 12918865 . A . PASS END=12918887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:30:0,86,1064:0,86,255:34,0 chr1 12918888 . A . PASS END=12918888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1075:0,74,255:30,0 chr1 12918889 . C . PASS END=12919151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:38:0,81,1215:0,102,255:40,0 chr1 12919548 . G . PASS END=12919553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,143,255:40,0 chr1 12919554 . G . PASS END=12919573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,152,255:40,0 chr1 12919574 . T . PASS END=12919574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:13:56:0,13,1853:0,13,255:40,0 chr1 12919575 . G . PASS END=12919580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,158,255:40,0 chr1 12919581 . T . PASS END=12919581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:19:58:0,19,1795:0,19,255:40,0 chr1 12919582 . G . PASS END=12919586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,173,255:40,0 chr1 12919587 . T . PASS END=12919587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:25:60:0,25,1984:0,25,255:40,0 chr1 12919588 . G . PASS END=12919588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 12919589 . A . PASS END=12919589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:44:59:0,44,1850:0,44,255:40,0 chr1 12919590 . G . PASS END=12919641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,160,255:40,0 chr1 12919642 . G . PASS END=12919642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,5:69:14:69:0,14,2241:0,14,255:40,0 chr1 12919643 . C . PASS END=12919671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,207,255:40,0 chr1 12919672 . T . LowGQ END=12919672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,8:80:0:80:0,0,2358:70,0,255:40,0 chr1 12919673 . G . PASS END=12919681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:85:0,120,1800:0,255,255:40,0 chr1 12919682 . C . PASS END=12919682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,6:80:8:80:0,8,2636:0,8,255:40,0 chr1 12919683 . G . PASS END=12919918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:61:0,120,1800:0,151,255:40,0 chr1 12919919 . T . PASS END=12919955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,103,1672:0,103,255:40,0 chr1 12919956 . G . LowGQ END=12919956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,12:49:0:49:0,0,939:67,0,255:35,0 chr1 12919957 . A . PASS END=12919958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,144,255:40,0 chr1 12919959 . T . PASS END=12919959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:52:47:0,52,1308:0,52,255:40,0 chr1 12919960 . C . PASS END=12919993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,108,1532:0,108,255:40,0 chr1 12919994 . A . PASS END=12920126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,130,255:40,0 chr1 12920472 . A . PASS END=12920481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,179,255:40,0 chr1 12920482 . G . PASS END=12920482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,9:82:60:82:0,60,2279:0,60,255:40,0 chr1 12920483 . G . PASS END=12920486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,4:82:99:81:0,120,1800:0,178,255:40,0 chr1 12920487 . G . PASS END=12920487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,11:82:41:82:0,41,2160:0,41,255:40,0 chr1 12920488 . C . PASS END=12920602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:81:76:0,81,1800:0,81,255:40,0 chr1 12921076 . G . PASS END=12921078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1156:0,93,255:31,0 chr1 12921079 . C . PASS END=12921079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 12921080 . C . PASS END=12921294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:35:0,92,1288:0,92,255:40,1 chr1 12921295 . C . PASS END=12921331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,196,255:40,0 chr1 12921332 . T C, 1.79 DRAGENSnpHardQUAL DP=77;MQ=122.06;MQRankSum=-4.822;ReadPosRankSum=2.201;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:64,12,0:0.158,0.000:76:28,7,0:36,5,0:5:32,0,50,428,2244,2672:226,0,255:40,0:1.7861e+00,4.7214e+00,5.7721e+01,4.3285e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:37,27,10,2:27,37,7,5 chr1 12921333 . G . PASS END=12921369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:78:0,120,1800:0,206,255:40,0 chr1 12921370 . T . PASS END=12921599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:94:55:0,94,1800:0,94,255:40,0 chr1 12921600 . C . PASS END=12921600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:7:54:0,7,1685:0,7,255:40,0 chr1 12921601 . G . PASS END=12921604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,145,255:40,0 chr1 12921605 . G . PASS END=12921634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,117,1755:0,125,255:40,0 chr1 12939365 . T . PASS END=12939365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 12939366 . C . PASS END=12939373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 12939374 . G . PASS END=12939387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr1 12939388 . C . PASS END=12939388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 12939389 . C . PASS END=12939406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,579:0,48,255:19,0 chr1 12939407 . G . PASS END=12939411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:25,0 chr1 12939412 . C . PASS END=12939413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:24,0 chr1 12939414 . C . PASS END=12939414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,846:0,39,255:25,0 chr1 12939415 . A . PASS END=12939415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr1 12939416 . G . PASS END=12939417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1019:0,81,255:29,0 chr1 12939418 . C . PASS END=12939418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 12939419 . A . PASS END=12939438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1260:0,87,255:40,0 chr1 12939439 . A . PASS END=12939475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,143,255:40,0 chr1 12939476 . G C, 32.28 PASS DP=66;MQ=33.18;MQRankSum=-4.705;ReadPosRankSum=3.715;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,29,0:0.446,0.000:65:16,16,0:20,13,0:32:67,0,38,1000,1271,2271:255,0,255:35,0:3.2279e+01,2.8901e-03,4.1336e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,14,20,9:12,24,15,14 chr1 12939477 . T . PASS END=12939513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,182,255:40,0 chr1 12939514 . A . PASS END=12939926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:68:0,120,1800:0,146,255:40,0 chr1 12941675 . C . PASS END=12941683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:30,0 chr1 12941684 . T . PASS END=12941684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 12941685 . G . PASS END=12941699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:30,0 chr1 12941700 . C . PASS END=12941700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 12941701 . G . PASS END=12941704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 12941705 . A . PASS END=12941705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 12941706 . A . PASS END=12941710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1167:0,85,255:35,0 chr1 12941711 . A . PASS END=12941711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 12941712 . C . PASS END=12942081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:88:35:0,88,1166:0,88,255:40,0 chr1 12942082 . C . PASS END=12942118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,212,255:40,0 chr1 12942119 . C T, 38.00 PASS DP=83;MQ=38.51;MQRankSum=-1.266;ReadPosRankSum=3.432;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,45,0:0.542,0.000:83:22,25,0:16,20,0:37:73,0,42,1581,1326,2907:255,0,255:36,0:3.8001e+01,8.1419e-04,4.5380e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,18,13,32:16,22,21,24 chr1 12942120 . T . PASS END=12942156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:80:0,120,1800:0,240,255:40,0 chr1 12942157 . C . PASS END=12942256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:62:0,120,1800:0,157,255:40,0 chr1 12942923 . C . PASS END=12943215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:86:34:0,86,1217:0,86,255:40,0 chr1 12952747 . C . PASS END=12952748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 12952749 . A . PASS END=12952749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 12952750 . G . PASS END=12952750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 12952751 . G . PASS END=12952752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 12952753 . G . PASS END=12952768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:24:0,67,858:0,67,255:27,0 chr1 12952769 . A . PASS END=12952777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,898:0,84,255:28,0 chr1 12952778 . G . PASS END=12952778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 12952779 . A . PASS END=12952781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 12952782 . G . PASS END=12952784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,1041:0,51,255:30,0 chr1 12952785 . A . PASS END=12952826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:32:0,88,1128:0,88,255:40,0 chr1 12952827 . T . PASS END=12952827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1132:0,72,255:31,0 chr1 12952828 . C . PASS END=12952836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1213:0,99,255:33,0 chr1 12952837 . C . PASS END=12952837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:32,0 chr1 12952838 . C . PASS END=12952844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:33,0 chr1 12952845 . C . PASS END=12952859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,74,255:26,0 chr1 12952860 . T . PASS END=12952860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:24,0 chr1 12952861 . C . PASS END=12952874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr1 12952875 . T . PASS END=12952875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 12952876 . T . PASS END=12952892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 12952893 . A . PASS END=12952893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 12952894 . A . PASS END=12952908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 12952909 . G . PASS END=12952924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:16,0 chr1 12952925 . A . PASS END=12952930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 12952931 . G . PASS END=12952939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:12:13:0,12,180:0,39,255:6,0 chr1 12952940 . A . PASS END=12952941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:9:12:0,9,135:0,36,255:3,0 chr1 12952942 . C . PASS END=12952944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:4,0 chr1 12952945 . C . LowGQ END=12953033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,0:3,0 chr1 12953034 . T . PASS END=12953108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:4,0 chr1 12953109 . C . LowDepth;LowGQ END=12953305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 12977513 . A . LowDepth;LowGQ END=12977581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 12977582 . G . LowDepth;LowGQ END=12977799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 12978182 . G . LowDepth;LowGQ END=12978484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 12978485 . G . LowGQ END=12978757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,1:2:0:1:0,0,16:0,0,16:3,0 chr1 12979672 . G . PASS END=12979691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,133,255:40,0 chr1 12979692 . A . PASS END=12979728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,164,255:40,0 chr1 12979729 . G A, 0.80 DRAGENSnpHardQUAL DP=73;MQ=24.90;MQRankSum=1.450;ReadPosRankSum=3.650;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:59,14,0:0.192,0.000:73:33,6,0:26,8,0:8:28,0,38,472,2066,2537:255,0,255:40,0:7.9544e-01,7.7637e+00,4.9097e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:34,25,10,4:28,31,8,6 chr1 12979730 . G . PASS END=12979766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,197,255:40,0 chr1 12979767 . A . PASS END=12979807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:60:0,120,1800:0,180,255:40,0 chr1 12979808 . T . PASS END=12979844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,120,1800:0,138,255:40,0 chr1 12979845 . T C, 5.39 DRAGENSnpHardQUAL DP=47;MQ=22.15;MQRankSum=2.500;ReadPosRankSum=1.671;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,11,0:0.234,0.000:47:19,6,0:17,5,0:5:39,0,30,385,1191,1576:255,0,255:34,0:5.3911e+00,1.4835e+00,3.4483e+01,3.8651e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,25,3,8:18,18,8,3 chr1 12979846 . T . PASS END=12979882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:36:0,98,1380:0,98,255:40,0 chr1 12979883 . G . PASS END=12979909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:32,0 chr1 12979910 . A . PASS END=12979927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,71,255:24,0 chr1 12979928 . C . PASS END=12979932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr1 12979933 . C . PASS END=12979952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 12979953 . G . PASS END=12979953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 12979954 . C . PASS END=12979959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 12979960 . T . PASS END=12979960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 12979961 . G . PASS END=12979967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 12979968 . T . PASS END=12979968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 12979969 . C . PASS END=12979995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 12979996 . G . PASS END=12980015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 12980016 . T . PASS END=12980016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 12980017 . G . PASS END=12980028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,53,255:19,0 chr1 12980029 . C . PASS END=12980031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr1 12980032 . G . PASS END=12980033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 12980034 . A . PASS END=12980040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:22,0 chr1 12980041 . T . PASS END=12980041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 12980042 . C . PASS END=12980064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:24,0 chr1 12980065 . C . PASS END=12980065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 12980066 . A . PASS END=12980071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 12980072 . G . PASS END=12980072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 12980073 . G . PASS END=12980090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,789:0,61,255:25,0 chr1 12980091 . G . PASS END=12980091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 12980092 . A . PASS END=12980092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 12980093 . T . PASS END=12980093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,782:0,42,255:22,0 chr1 12980094 . T . PASS END=12980121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 12980128 . G . PASS END=12980149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 12980150 . A . PASS END=12980150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 12980151 . T . PASS END=12980154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 12980155 . T . PASS END=12980182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,52,255:21,0 chr1 12980183 . T . PASS END=12980183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 12980184 . G . PASS END=12980194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,615:0,51,255:17,0 chr1 12980195 . G . PASS END=12980220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 12980221 . C . PASS END=12980233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 12998505 . T . LowDepth;LowGQ END=12999066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13000814 . C . LowDepth;LowGQ END=13001187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13001188 . G . PASS END=13001214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,70:0,6,70:3,0 chr1 13001215 . C . PASS END=13001225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 13001226 . G . PASS END=13001251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 13001252 . T C, 33.55 PASS DP=4;MQ=15.32;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,4,0:1.000,0.000:4:0,1,0:0,3,0:10:71,12,0,155,12,155:155,12,0:0,0:3.3552e+01,9.5516e+00,5.1271e-01,1.5266e+02,4.4322e+01,1.5566e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,3:0,0,2,2 chr1 13001253 . G . PASS END=13001261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 13001262 . T . PASS END=13001271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 13001272 . G . PASS END=13001284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 13001285 . G . LowGQ END=13001285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 13001286 . T . PASS END=13001289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 13001290 . G . PASS END=13001317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 13001318 . C . LowGQ END=13001318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr1 13001319 . G . PASS END=13001339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 13001340 . C . PASS END=13001350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 13001351 . T . PASS END=13001351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 13001352 . T . PASS END=13001352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 13001353 . C . PASS END=13001370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 13001371 . A . PASS END=13001371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 13001372 . T . PASS END=13001376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 13001377 . C . PASS END=13001378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 13001379 . C G, 0.33 DRAGENSnpHardQUAL DP=5;MQ=15.58;MQRankSum=0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:0,0,0:4,1,0:11:24,0,26,36,143,179:37,0,137:3,0:3.3057e-01,1.1356e+01,4.0356e+01,4.7139e+01,1.8921e+02,1.9322e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,1,0:3,1,0,1 chr1 13001380 . T . PASS END=13001395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 13002062 . C . LowDepth;LowGQ END=13002196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13002197 . G . LowDepth;LowGQ END=13002213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13002214 . G . LowDepth;LowGQ END=13002348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13052726 . T . PASS END=13052751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,159,255:40,0 chr1 13052752 . G . PASS END=13052788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,197,255:40,0 chr1 13052789 . G A, 34.77 PASS DP=86;MQ=74.55;MQRankSum=-1.977;ReadPosRankSum=4.732;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:58,28,0:0.326,0.000:86:30,10,0:28,18,0:35:70,0,46,964,1992,2956:255,0,255:40,0:3.4767e+01,1.5060e-03,4.8852e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,28,9,19:30,28,17,11 chr1 13052790 . T . PASS END=13052870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:50:0,120,1800:0,150,255:40,2 chr1 13052871 . C T, 5.92 DRAGENSnpHardQUAL DP=50;MQ=74.60;MQRankSum=-1.389;ReadPosRankSum=-1.869;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,9,0:0.180,0.000:50:19,3,0:22,6,0:6:39,0,46,322,1437,1759:168,0,255:35,0:5.9173e+00,1.2844e+00,5.0684e+01,3.2310e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,33,4,5:18,23,4,5 chr1 13052872 . T . PASS END=13052906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:34:0,90,1350:0,91,255:40,0 chr1 13052907 . T C, 44.88 PASS DP=34;MQ=73.78;MQRankSum=-1.145;ReadPosRankSum=1.179;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,19,0:0.559,0.000:34:8,9,0:7,10,0:43:80,0,45,680,536,1216:255,0,255:14,0:4.4875e+01,2.0450e-04,4.8378e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,12,1,18:6,9,9,10 chr1 13052908 . G . PASS END=13052912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:32,0 chr1 13052913 . G . PASS END=13052915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,945:0,80,255:21,0 chr1 13052916 . G . PASS END=13052938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 13052939 . T . PASS END=13052944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 13052945 . T . PASS END=13052947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 13052948 . G . PASS END=13052954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 13052955 . T . PASS END=13052961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:8,0 chr1 13052962 . G . PASS END=13052963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:10:0,15,225:0,30,255:5,0 chr1 13052964 . A . LowGQ END=13052998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,6,78:3,0 chr1 13109144 . G . LowDepth;LowGQ END=13109179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr1 13109180 . T . PASS END=13109272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 13109273 . T . PASS END=13109345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 13109346 . T . LowGQ END=13109399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,86:0,0,86:3,0 chr1 13111214 . C . LowGQ END=13111476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 13111477 . G . PASS END=13111484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 13111485 . A . PASS END=13111517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 13111518 . C . PASS END=13111522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 13111523 . G . PASS END=13111541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr1 13111542 . C . PASS END=13111592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 13111593 . A . LowGQ END=13111593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 13111594 . T . PASS END=13111603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 13111604 . G . PASS END=13111611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 13111612 . C . PASS END=13111613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 13111614 . G . PASS END=13111614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 13111615 . G . PASS END=13111616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 13111651 . G . PASS END=13111659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:18,0 chr1 13111660 . C . PASS END=13111679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 13111680 . A . PASS END=13111680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 13111681 . A . PASS END=13111696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:26,0 chr1 13111697 . C . PASS END=13111702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 13111703 . A . PASS END=13111703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 13111704 . T . PASS END=13111708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 13111709 . C . PASS END=13111709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 13111710 . A . PASS END=13111710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 13111711 . C . PASS END=13111711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:27,0 chr1 13111712 . T . PASS END=13111717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,914:0,84,255:28,0 chr1 13111718 . T . PASS END=13111719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 13111720 . T . PASS END=13111727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 13112402 . A . LowDepth;LowGQ END=13112641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13142562 . G . PASS END=13142579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,817:0,72,255:25,0 chr1 13142580 . A . PASS END=13142607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,878:0,72,255:25,0 chr1 13142608 . A . PASS END=13142608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 13142609 . G . PASS END=13142621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,945:0,75,255:26,0 chr1 13142622 . C T, 120.32 PASS DP=26;MQ=114.47;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,26,0:1.000,0.000:26:0,11,0:0,15,0:70:158,73,0,258,258,258:255,78,0:0,0:1.2032e+02,7.0318e+01,5.1772e-07,2.5509e+02,2.8986e+02,2.5810e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,15:0,0,14,12:13142622 chr1 13142623 . A G, 120.48 PASS DP=26;MQ=114.47;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,26,0:1.000,0.000:26:0,11,0:0,15,0:70:158,73,0,258,258,258:255,78,0:0,0:1.2048e+02,7.0478e+01,5.1772e-07,2.5525e+02,2.9002e+02,2.5826e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,15:0,0,14,12:13142622 chr1 13142624 . C . PASS END=13142634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 13142635 . A . PASS END=13142635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr1 13142636 . G . PASS END=13142646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,930:0,62,255:24,0 chr1 13142647 . A . PASS END=13142647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:20,0 chr1 13142648 . C . PASS END=13142656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 13142657 . T . PASS END=13142657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 13142658 . T . PASS END=13142658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 13142659 . T . PASS END=13142665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,782:0,50,255:19,0 chr1 13142666 . A . PASS END=13142686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:17:0,42,607:0,44,255:18,0 chr1 13142687 . C . PASS END=13142689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 13144439 . C . LowDepth;LowGQ END=13144680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13144681 . T . LowGQ END=13145000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:2,0 chr1 13182991 . T . PASS END=13183401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:98:38:0,98,1365:0,98,255:40,1 chr1 13183402 . T . PASS END=13183438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:63:0,120,1800:0,171,255:40,0 chr1 13183439 . T C, 16.73 PASS DP=81;MQ=74.46;MQRankSum=-0.017;ReadPosRankSum=1.221;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:63,18,0:0.222,0.000:81:33,8,0:30,10,0:17:51,0,47,614,2224,2838:255,0,255:40,0:1.6731e+01,9.3226e-02,4.9693e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:35,28,9,9:43,20,9,9 chr1 13183440 . G . PASS END=13183476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:82:0,120,1800:0,235,255:40,0 chr1 13183477 . A . PASS END=13183872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:50:0,111,1665:0,120,255:40,1 chr1 13216688 . T . PASS END=13216692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 13216693 . A . LowGQ END=13216693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 13216694 . G . PASS END=13216698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 13216699 . A . PASS END=13216699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 13216700 . T . PASS END=13216739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,166:0,15,166:6,0 chr1 13216740 . T . PASS END=13216767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 13216768 . T . PASS END=13216782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,217:6,0 chr1 13216783 . T . PASS END=13216783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 13216784 . T . PASS END=13216807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,156:0,15,156:5,0 chr1 13216808 . C . LowDepth;LowGQ END=13217249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 13219000 . C . LowDepth;LowGQ END=13219181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 13219182 . G . PASS END=13219214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:4,0 chr1 13219215 . C . PASS END=13219246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 13219247 . G . PASS END=13219269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 13219270 . T . LowGQ END=13219270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 13219271 . T . PASS END=13219282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 13219283 . T . PASS END=13219289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 13219290 . G . PASS END=13219311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 13219312 . T . LowGQ END=13219312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 13219313 . T . PASS END=13219321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 13219322 . T . PASS END=13219373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr1 13219374 . G . PASS END=13219389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 13219390 . A . PASS END=13219403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,108:0,9,108:3,0 chr1 13219404 . G . PASS END=13219425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 13219426 . G . PASS END=13219439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,235:8,0 chr1 13219440 . T . PASS END=13219440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 13219441 . C . PASS END=13219447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 13219448 . T . PASS END=13219457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 13219458 . G . PASS END=13219513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:26,0 chr1 13219514 . C . PASS END=13219516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 13219517 . C . PASS END=13219517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 13219518 . A . PASS END=13219518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 13219519 . G . PASS END=13219519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 13219520 . A . PASS END=13219520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:25,0 chr1 13219521 . C . PASS END=13219523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 13219524 . A . PASS END=13219525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 13219526 . C . PASS END=13219526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 13219527 . C . PASS END=13219527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 13219528 . A . PASS END=13219551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:31,0 chr1 13219552 . T . PASS END=13219552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 13219553 . G . PASS END=13219557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 13219558 . T . PASS END=13219558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:30,0 chr1 13219559 . C . PASS END=13219563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 13219564 . A . PASS END=13219564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:28,0 chr1 13219565 . C T, 13.01 PASS DP=31;MQ=16.62;MQRankSum=2.763;ReadPosRankSum=3.416;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,9,0:0.290,0.000:31:7,6,0:15,3,0:13:48,0,33,322,787,1109:255,0,255:19,0:1.3012e+01,2.2366e-01,3.6557e+01,3.2200e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,6,3:12,10,7,2 chr1 13219566 . T . PASS END=13219569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 13219570 . A . PASS END=13219570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:28,0 chr1 13219571 . G . PASS END=13219581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:33,0 chr1 13330414 . C . LowDepth;LowGQ END=13330559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13330561 . G . LowDepth;LowGQ END=13330626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13330628 . G . LowDepth;LowGQ END=13330883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13330885 . C . LowDepth;LowGQ END=13330892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13331379 . C . LowDepth;LowGQ END=13331583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13331588 . G . LowDepth;LowGQ END=13331665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13364891 . A . LowDepth;LowGQ END=13365025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13365026 . A . LowDepth;LowGQ END=13365042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13365043 . C . LowDepth;LowGQ END=13365177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13365844 . G . PASS END=13365859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,771:0,69,255:23,0 chr1 13365860 . G . LowGQ END=13365860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,643:25,0,255:19,0 chr1 13365861 . T . PASS END=13365863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 13365864 . T . PASS END=13365864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr1 13365865 . G . PASS END=13365866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 13365867 . A . PASS END=13365867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 13365868 . T . PASS END=13365876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 13365877 . T . PASS END=13365877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 13365878 . G . PASS END=13365886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 13365887 . A . PASS END=13365887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:20,0 chr1 13365888 . A . PASS END=13365894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 13365895 . G . PASS END=13365949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,507:0,45,255:19,0 chr1 13365950 . A . PASS END=13365951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 13365952 . A . PASS END=13365955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 13365956 . C . PASS END=13365966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,26,255:8,0 chr1 13365967 . C . PASS END=13365975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 13365976 . G . PASS END=13365986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,147:3,0 chr1 13365987 . A G, 35.00 PASS DP=3;MQ=17.15;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:7:72,9,0,116,9,116:116,9,0:0,0:3.4998e+01,6.9982e+00,9.6905e-01,1.1428e+02,4.1768e+01,1.1728e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,3:0,0,2,1 chr1 13365988 . G . PASS END=13366020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,49:0,6,49:3,0 chr1 13366021 . C . PASS END=13366052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 13366053 . G A, 34.31 PASS DP=5;MQ=13.21;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,1,0:0,4,0:12:72,15,0,194,15,194:194,15,0:0,0:3.4313e+01,1.2313e+01,2.6455e-01,1.9112e+02,4.7083e+01,1.9412e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,5:0,0,4,1 chr1 13366054 . C . PASS END=13366062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr1 13366063 . A . PASS END=13366090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 13366091 . C . LowGQ END=13366172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,39:3,0 chr1 13366173 . G . LowDepth;LowGQ END=13366425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13368172 . C . LowDepth;LowGQ END=13368295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 13368296 . A . LowDepth END=13368332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 13368333 . T C, 5.47 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=11.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4709e+00,4.4660e+00,4.4563e+00,4.0241e+01,3.9236e+01,4.3241e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,0,1 chr1 13368334 . C . LowDepth END=13368370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 13368371 . T . LowDepth;LowGQ END=13368494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 13368495 . T . PASS END=13368529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,33:0,3,33:2,0 chr1 13368530 . G C, 2.21 DRAGENSnpHardQUAL DP=2;MQ=10.51;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,0,0:1,1,0:4:33,0,10,36,36,72:33,0,33:1,0:2.2058e+00,4.2120e+00,1.7212e+01,3.9986e+01,7.4727e+01,7.8730e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,1,0:0,1,0,1 chr1 13368531 . T . PASS END=13368534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 13368535 . G . PASS END=13368547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 13368548 . C . LowGQ END=13368549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,110:4,0 chr1 13368550 . C . PASS END=13368559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:4,0 chr1 13368560 . T . LowGQ END=13368560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr1 13368561 . A . PASS END=13368565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 13368566 . G . PASS END=13368627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 13368628 . G . LowGQ END=13368628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr1 13368629 . A . PASS END=13368635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 13368636 . T . LowGQ END=13368637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 13368638 . A . PASS END=13368643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 13368644 . C . LowDepth;LowGQ END=13368733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 13386982 . T . LowDepth;LowGQ END=13387092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13424003 . A . LowDepth;LowGQ END=13424046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13424263 . T . LowDepth;LowGQ END=13424295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13448200 . G . PASS END=13448204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 13448205 . G . PASS END=13448206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 13448207 . A . PASS END=13448207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:59:20:0,59,565:0,59,255:20,0 chr1 13448208 . C . PASS END=13448211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr1 13448212 . G . PASS END=13448212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 13448213 . G . PASS END=13448231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:68:23:0,68,556:0,68,255:26,0 chr1 13448232 . G . PASS END=13448233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 13448234 . G . PASS END=13448236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 13448237 . G . PASS END=13448240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 13448241 . A . PASS END=13448241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 13448242 . C . PASS END=13448282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1157:0,89,255:40,0 chr1 13448283 . A G, 165.64 PASS DP=46;MQ=21.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,18,0:0,28,0:135:203,138,0,303,303,303:255,138,0:0,0:1.6564e+02,1.3497e+02,0.0000e+00,3.0041e+02,3.3518e+02,3.0342e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,31,15:0,0,27,19 chr1 13448284 . C . PASS END=13448350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,99,1371:0,99,255:40,0 chr1 13448351 . T C, 145.04 PASS DP=39;MQ=22.35;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,16,0:0,23,0:114:183,117,0,1504,117,1504:255,117,0:0,0:1.4504e+02,1.1438e+02,0.0000e+00,4.5000e+02,1.4915e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,18:0,0,24,15 chr1 13448352 . G . PASS END=13448373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,101,255:35,0 chr1 13448374 . A . PASS END=13448374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:29,0 chr1 13448375 . C . PASS END=13448375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 13448376 . T . PASS END=13448383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,99,255:22,0 chr1 13448384 . G . PASS END=13448387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:31:0,54,810:0,93,255:18,0 chr1 13448388 . A . PASS END=13448388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 13448389 . G . PASS END=13448407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:17,0 chr1 13448408 . A . PASS END=13448410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 13448411 . A . PASS END=13448411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 13448412 . T . PASS END=13448415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr1 13448416 . G . PASS END=13448435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,545:0,48,255:16,0 chr1 13448436 . T . PASS END=13448436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 13448437 . T . PASS END=13448457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 13448458 . G . PASS END=13448459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 13448460 . G . PASS END=13448460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 13448461 . T . PASS END=13448475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,31,255:13,0 chr1 13448476 . G . PASS END=13448477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:8:13:0,8,388:0,8,255:10,0 chr1 13448478 . A . PASS END=13448489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 13448490 . A . PASS END=13448490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 13448491 . G . PASS END=13448493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 13448494 . G . PASS END=13448496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 13448497 . A . PASS END=13448502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 13448503 . A . PASS END=13448503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 13448504 . T . PASS END=13448506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 13448507 . T . PASS END=13448507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 13448508 . T . PASS END=13448512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 13448513 . T . PASS END=13448513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr1 13448514 . A . PASS END=13448534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,205:0,21,205:9,0 chr1 13448535 . A . PASS END=13448535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 13448536 . G . PASS END=13448540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 13448541 . A . PASS END=13448541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 13448542 . C . PASS END=13448545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 13448546 . A . PASS END=13448546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 13448552 . T . PASS END=13448556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,211:5,0 chr1 13448557 . C . PASS END=13448557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 13448558 . A . PASS END=13448592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 13448593 . G . PASS END=13448594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 13448595 . G . PASS END=13448608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,88:3,0 chr1 13449084 . C . LowDepth;LowGQ END=13449214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13449560 . C . LowDepth;LowGQ END=13449688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13449729 . T . LowDepth;LowGQ END=13449787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13449802 . T . LowDepth;LowGQ END=13450098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13450550 . C . LowDepth;LowGQ END=13450836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13607927 . C . LowDepth;LowGQ END=13608328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13609243 . C . LowDepth;LowGQ END=13609818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13610201 . C . LowDepth;LowGQ END=13610419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13610420 . A . LowDepth;LowGQ END=13610487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13632348 . A . LowDepth;LowGQ END=13632634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13633031 . G . LowDepth;LowGQ END=13633609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13644800 . A . LowDepth;LowGQ END=13644934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13644935 . T . LowDepth;LowGQ END=13644957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13644958 . C . LowDepth;LowGQ END=13645092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13645764 . G . PASS END=13645796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 13645797 . T . LowGQ END=13645797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 13645798 . G . PASS END=13645832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr1 13645833 . T . LowDepth;LowGQ END=13646096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 13646097 . C . LowDepth;LowGQ END=13646345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13648095 . C . LowDepth;LowGQ END=13648656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13668905 . C . PASS END=13668915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 13668916 . G . LowGQ END=13668916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 13668917 . A . PASS END=13668920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,268:0,30,255:10,0 chr1 13668921 . A . PASS END=13668921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 13668922 . G . PASS END=13668924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 13668925 . C . PASS END=13668931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 13668932 . C . PASS END=13668937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 13668938 . C . PASS END=13668938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 13668939 . G . PASS END=13668951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:12,0 chr1 13668952 . A . PASS END=13668952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 13668953 . G . PASS END=13668963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 13668964 . G . PASS END=13668983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,582:0,40,255:19,0 chr1 13668984 . C . PASS END=13668999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr1 13669000 . C . PASS END=13669000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,654:0,13,255:21,0 chr1 13669001 . T . PASS END=13669004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 13669005 . C . PASS END=13669005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 13669006 . T . PASS END=13669008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 13669009 . G . PASS END=13669239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:34:0,81,1215:0,95,255:40,0 chr1 13669240 . A . PASS END=13669241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:37:0,78,1170:0,111,255:26,0 chr1 13669242 . T . PASS END=13669246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,92,255:29,0 chr1 13669247 . G . PASS END=13669256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,70,255:24,0 chr1 13669257 . C . PASS END=13669303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,668:0,54,255:19,0 chr1 13669304 . A . PASS END=13669304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 13669305 . G . PASS END=13669312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 13669313 . G . PASS END=13669354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr1 13669355 . C . PASS END=13669355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 13669356 . A . PASS END=13669379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 13669380 . G . PASS END=13669404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 13669405 . C . PASS END=13669440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,141:0,12,141:6,0 chr1 13669441 . T . LowGQ END=13669441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 13669442 . C . PASS END=13669447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr1 13669448 . G . PASS END=13669463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr1 13669939 . C . LowDepth;LowGQ END=13670069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13670415 . C . LowDepth;LowGQ END=13670993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13671405 . C . LowDepth;LowGQ END=13671691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13695525 . C . LowDepth;LowGQ END=13695586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13695587 . A . LowDepth END=13695599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:2,0 chr1 13695600 . G C, 13.29 PASS DP=2;MQ=10.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,2,0:0,0,0:3:48,3,0,148,148,148:78,6,0:0,0:1.3288e+01,3.2906e+00,3.1484e+00,1.4806e+02,1.8283e+02,1.5107e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,2,0:0,0,2,0 chr1 13695601 . A . PASS END=13695602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 13695603 . G C, 13.29 PASS DP=2;MQ=10.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,2,0:0,0,0:3:48,3,0,148,148,148:78,6,0:0,0:1.3288e+01,3.2906e+00,3.1484e+00,1.4806e+02,1.8283e+02,1.5107e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,2,0:0,0,2,0 chr1 13695604 . G . PASS END=13695620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 13695621 . G T, 21.03 PASS DP=3;MQ=11.49;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,3,0:0,0,0:7:58,9,0,116,9,116:116,9,0:0,0:2.1031e+01,7.0312e+00,1.0021e+00,1.1431e+02,4.1801e+01,1.1731e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,0:0,0,3,0 chr1 13695622 . T . PASS END=13695636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 13695637 . T . PASS END=13695654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 13695655 . A . PASS END=13695684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,154:0,21,154:8,0 chr1 13695685 . G A, 35.11 PASS DP=8;MQ=13.11;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,7,0:0,1,0:21:73,24,0,310,24,310:255,24,0:0,0:3.5113e+01,2.1113e+01,3.5103e-02,3.0719e+02,5.5883e+01,3.1019e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,0:0,0,7,1 chr1 13695686 . A . PASS END=13695701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:9,0 chr1 13695702 . G . PASS END=13695721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 13695722 . G . PASS END=13695722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 13695723 . G . PASS END=13695749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr1 13695750 . G . PASS END=13695757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:19,0 chr1 13695758 . T . PASS END=13695776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:26,0 chr1 13695777 . G . PASS END=13695780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 13695781 . T . PASS END=13695781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 13695782 . T . PASS END=13695783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 13695784 . A . PASS END=13695784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 13695785 . G . PASS END=13695785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr1 13695786 . A . PASS END=13695786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,895:0,34,255:25,0 chr1 13695787 . C G, 120.05 PASS DP=32;MQ=22.76;FractionInformativeReads=0.969 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,16,0:0,15,0:89:158,92,0,1144,92,1144:255,96,0:0,0:1.2005e+02,8.9381e+01,0.0000e+00,4.5000e+02,1.2415e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,6:0,0,20,11 chr1 13695788 . C . PASS END=13695815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:31:0,87,1305:0,90,255:40,0 chr1 13695816 . G A, 173.81 PASS DP=49;MQ=24.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,25,0:0,24,0:142:212,145,0,312,312,312:255,147,0:0,0:1.7381e+02,1.4214e+02,0.0000e+00,3.0858e+02,3.4335e+02,3.1159e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,30,19:0,0,26,23 chr1 13695817 . C . PASS END=13695853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,131,255:40,0 chr1 13695854 . G . PASS END=13695936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,108,1620:0,122,255:40,0 chr1 13695937 . A . PASS END=13695960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1305:0,93,255:38,0 chr1 13695961 . A . PASS END=13695967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:23,0 chr1 13695968 . G . PASS END=13695968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:29:0,42,630:0,87,255:14,0 chr1 13695969 . C . PASS END=13695973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:33:24:0,33,495:0,59,255:12,0 chr1 13695974 . T C, 97.77 PASS DP=24;MQ=22.23;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,12,0:0,12,0:69:136,72,0,901,72,901:255,72,0:0,0:9.7771e+01,6.8771e+01,5.1772e-07,4.5000e+02,1.0354e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,15:0,0,11,13 chr1 13695975 . A . PASS END=13695992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,495:0,32,255:13,0 chr1 13695993 . C . PASS END=13696010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,23,255:9,0 chr1 13696011 . A . PASS END=13696021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:7:0,11,225:0,11,255:7,0 chr1 13696022 . A G, 56.09 PASS DP=7;MQ=10.46;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,7,0:1.000,0.000:7:0,5,0:0,2,0:42:94,45,0,194,194,194:255,21,0:0,0:5.6094e+01,4.2094e+01,2.7880e-04,1.9086e+02,2.2563e+02,1.9387e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,7:0,0,2,5:13696022 chr1 13696023 . G . PASS END=13696023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr1 13696024 . G . PASS END=13696024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 13696025 . G . PASS END=13696028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 13696029 . A G, 9.44 DRAGENSnpHardQUAL DP=6;MQ=10.37;MQRankSum=0.720;ReadPosRankSum=-0.720;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,2,0:0.333,0.000:6:3,2,0:1,0,0:8:44,0,11,144,144,144:60,0,115:3,0:9.4420e+00,6.9378e-01,1.4694e+01,1.4421e+02,1.7898e+02,1.4722e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,4,0,2:1,3,0,2 chr1 13696030 . C . PASS END=13696046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr1 13696047 . A T, 29.19 PASS DP=6;MQ=11.11;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,6,0:1.000,0.000:6:0,5,0:0,1,0:15:67,18,0,217,18,217:217,18,0:0,0:2.9191e+01,1.5191e+01,1.3890e-01,2.1378e+02,4.9961e+01,2.1678e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,6:0,0,1,5:13696022 chr1 13696048 . T . PASS END=13696053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 13696054 . G A, 29.20 PASS DP=6;MQ=11.11;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,6,0:1.000,0.000:6:0,5,0:0,1,0:15:67,18,0,233,18,233:233,18,0:0,0:2.9197e+01,1.5197e+01,1.3870e-01,2.2980e+02,4.9967e+01,2.3280e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,6:0,0,1,5:13696022 chr1 13696055 . A . PASS END=13696064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 13696065 . T . PASS END=13696065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 13696066 . A . PASS END=13696089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,135:6,0 chr1 13696090 . T C, 25.89 PASS DP=5;MQ=10.44;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:63,15,0,165,15,165:172,15,0:0,0:2.5892e+01,1.1892e+01,3.0249e-01,1.6191e+02,4.6662e+01,1.6491e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,5:0,0,1,4 chr1 13696091 . T . PASS END=13696098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 13697107 . C . LowDepth;LowGQ END=13697585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13698072 . C . LowDepth;LowGQ END=13698358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13716118 . A . LowDepth;LowGQ END=13716323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13716324 . G . PASS END=13716404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,31:0,3,31:2,0 chr1 13716801 . G . PASS END=13716811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 13716812 . T . PASS END=13716812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 13716813 . T . PASS END=13716852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,795:0,72,255:26,0 chr1 13716853 . A . PASS END=13716929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1047:0,81,255:39,0 chr1 13716930 . A . PASS END=13716969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:26,0 chr1 13716970 . C . PASS END=13716984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 13716985 . A . PASS END=13716985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 13716986 . G . PASS END=13716997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,47,255:19,0 chr1 13716998 . A . PASS END=13717002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 13717003 . C . PASS END=13717003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 13717004 . T . PASS END=13717004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 13717005 . G . PASS END=13717008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 13717009 . T . PASS END=13717015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 13717016 . G . PASS END=13717016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 13717017 . C . PASS END=13717026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 13717027 . C . PASS END=13717039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 13717040 . G . PASS END=13717050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,249:5,0 chr1 13717051 . C . LowGQ END=13717138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,16:3,0 chr1 13717139 . A . LowDepth;LowGQ END=13717377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13717378 . A . LowDepth;LowGQ END=13717379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13718404 . G . PASS END=13718408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 13718409 . T . PASS END=13718409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 13718410 . C . PASS END=13718412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 13718413 . G . PASS END=13718414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 13718415 . A . PASS END=13718419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 13718420 . T . PASS END=13718421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr1 13718422 . G . PASS END=13718424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 13718425 . A . PASS END=13718427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 13718428 . C . PASS END=13718428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 13718429 . T . PASS END=13718429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,528:0,37,255:15,0 chr1 13718430 . T . PASS END=13718433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 13718434 . A . PASS END=13718434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 13718435 . T . PASS END=13718436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:15,0 chr1 13718437 . C . PASS END=13718437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:14,0 chr1 13718438 . T . PASS END=13718438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 13718439 . G . PASS END=13718439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 13718440 . T . PASS END=13718442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 13718443 . T . PASS END=13718443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 13718444 . G . PASS END=13718444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 13718445 . C . PASS END=13718446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,460:0,9,255:14,0 chr1 13718447 . T . PASS END=13718447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 13718448 . A . LowGQ END=13718448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:12,0 chr1 13718449 . C . PASS END=13718449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 13718450 . C . PASS END=13718450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 13718451 . T . PASS END=13718451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 13718452 . A . PASS END=13718452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 13718453 . G . PASS END=13718476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,47,255:19,0 chr1 13718477 . T . PASS END=13718481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,735:0,60,255:21,0 chr1 13718482 . G . PASS END=13718483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 13718484 . A . PASS END=13718485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 13718486 . C . PASS END=13718486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 13718487 . C . PASS END=13718540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:24,0 chr1 13718541 . C . PASS END=13718572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:18:0,50,723:0,50,255:19,0 chr1 13718573 . A . PASS END=13718573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 13718574 . A . PASS END=13718583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 13718584 . T . PASS END=13718584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 13718585 . A . PASS END=13718585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 13718586 . C . PASS END=13718598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 13718599 . C . PASS END=13718618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 13718619 . T . PASS END=13718625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 13718626 . C . PASS END=13718629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 13718630 . C . PASS END=13718631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 13718632 . G . PASS END=13718633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:10,0 chr1 13718634 . T . PASS END=13718638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 13718639 . G . PASS END=13718654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 13718655 . T . LowGQ END=13718655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 13718656 . G . PASS END=13718663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 13718664 . G . PASS END=13718666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 13718667 . C . PASS END=13718667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 13718668 . C . PASS END=13718691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,280:0,27,255:9,0 chr1 13718692 . C . PASS END=13718695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 13718696 . A . PASS END=13718696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 13718697 . A . PASS END=13718700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 13718701 . G . PASS END=13718703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 13718704 . C . PASS END=13718777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:11,0 chr1 13718778 . C . PASS END=13718806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 13718807 . C . PASS END=13718850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr1 13718851 . G . PASS END=13718881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 13718882 . A . PASS END=13718882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr1 13718883 . G . PASS END=13718892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr1 13718893 . T . PASS END=13718894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 13718895 . G . PASS END=13718913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 13718914 . C . PASS END=13718926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 13718927 . C . PASS END=13718931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr1 13718932 . T . PASS END=13718932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 13718933 . G . PASS END=13718962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,501:0,48,255:17,0 chr1 13742812 . A . PASS END=13742887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 13742888 . C . LowGQ END=13742927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,61:0,0,69:3,0 chr1 13742928 . G . PASS END=13742937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 13742938 . G . PASS END=13742954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 13742955 . C . PASS END=13742958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 13742959 . G . PASS END=13742962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 13742963 . C . PASS END=13742963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 13742964 . C . PASS END=13742969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 13742970 . G . PASS END=13743010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,374:0,30,255:13,0 chr1 13743011 . G . PASS END=13743041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:19,0 chr1 13743042 . C . PASS END=13743049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 13743050 . C . PASS END=13743051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 13743052 . G . PASS END=13743056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 13743057 . C . PASS END=13743093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,44,255:19,0 chr1 13743094 . C . PASS END=13743098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 13744597 . G . LowDepth;LowGQ END=13744790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,16:2,0 chr1 13744791 . A . LowDepth;LowGQ END=13745175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13747172 . C . LowDepth;LowGQ END=13747733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 13802314 . T . PASS END=13802319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:14,0 chr1 13802320 . A . PASS END=13802320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 13802321 . T . PASS END=13802324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 13802325 . T C, 89.14 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,7,0:0,7,0:39:127,42,0,543,42,543:255,42,0:0,0:8.9137e+01,3.9137e+01,5.2992e-04,4.5000e+02,7.3907e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,4:0,0,5,9 chr1 13802326 . G . PASS END=13802328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 13802329 . C . PASS END=13802340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 13802341 . C . PASS END=13802362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:18,0 chr1 13802363 . C . PASS END=13802376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 13802377 . C . PASS END=13802394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:26,0 chr1 13802395 . G . PASS END=13802395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 13802396 . A . PASS END=13802396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 13802397 . A . PASS END=13802399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 13802400 . A . PASS END=13802436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,972:0,81,255:32,0 chr1 13802437 . G A, 40.21 PASS DP=32;MQ=248.11;MQRankSum=4.452;ReadPosRankSum=0.386;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,10,0:0.312,0.000:32:17,3,0:5,7,0:40:75,0,50,326,701,1027:255,0,255:21,0:4.0211e+01,4.3542e-04,5.3000e+01,3.2633e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,5,5:11,11,4,6 chr1 13802438 . G . PASS END=13802444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 13802445 . T . PASS END=13802449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 13802450 . A . PASS END=13802468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 13802469 . A . PASS END=13802474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 13802475 . T . PASS END=13802495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 13802496 . T . PASS END=13802497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 13802498 . G . PASS END=13802512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,707:0,60,255:20,0 chr1 13802513 . C . PASS END=13802521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 13802522 . A . PASS END=13802526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr1 13802527 . C . PASS END=13802527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 13802528 . C . PASS END=13802551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 13802552 . T . PASS END=13802567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:9,0 chr1 13839458 . C . PASS END=13839458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 13839459 . T . PASS END=13839459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,626:0,24,255:22,0 chr1 13839460 . T . PASS END=13839460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 13839461 . T . PASS END=13839461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,704:0,22,255:21,0 chr1 13839462 . G . PASS END=13839463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 13839464 . G . PASS END=13839464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 13839465 . C . PASS END=13839465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr1 13839466 . A . PASS END=13839466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:21,0 chr1 13839467 . G . PASS END=13839469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,763:0,61,255:25,0 chr1 13839470 . T . PASS END=13839470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:23,0 chr1 13839471 . G . PASS END=13839472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 13839473 . A . PASS END=13839473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,778:0,45,255:23,0 chr1 13839474 . T . PASS END=13839480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,814:0,61,255:27,0 chr1 13839481 . T . PASS END=13839481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 13839482 . C . PASS END=13839483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,898:0,73,255:29,0 chr1 13839484 . T . PASS END=13839484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr1 13839485 . G . PASS END=13839485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,915:0,57,255:28,0 chr1 13839486 . G . PASS END=13839486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 13839487 . A . PASS END=13839487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,992:0,43,255:28,0 chr1 13839488 . T . PASS END=13839491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 13839492 . G . PASS END=13839492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,981:0,54,255:30,0 chr1 13839493 . G . PASS END=13839495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1083:0,96,255:33,0 chr1 13839496 . A . LowGQ END=13839496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:0:33:0,0,862:4,0,255:29,0 chr1 13839497 . A . PASS END=13839497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1197:0,99,255:33,0 chr1 13839498 . G . PASS END=13839499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:31,0 chr1 13839500 . G . PASS END=13839507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1081:0,82,255:33,0 chr1 13839508 . A . PASS END=13839508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:31,0 chr1 13839509 . A . PASS END=13839509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1170:0,83,255:32,0 chr1 13839510 . G . PASS END=13839510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1064:0,52,255:31,0 chr1 13839511 . T . PASS END=13839511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 13839512 . C . PASS END=13839512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,1013:0,65,255:29,0 chr1 13839513 . A . PASS END=13839516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:33:0,88,1136:0,88,255:32,0 chr1 13839517 . T . PASS END=13839517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:30,0 chr1 13839518 . C . PASS END=13839519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1209:0,89,255:31,0 chr1 13839520 . C . PASS END=13839520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:30,0 chr1 13839521 . A . PASS END=13839521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:30,0 chr1 13839522 . C . PASS END=13839523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1227:0,88,255:32,0 chr1 13839524 . G . PASS END=13839524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1052:0,49,255:31,0 chr1 13839525 . C . PASS END=13839527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1160:0,88,255:33,0 chr1 13839528 . G . PASS END=13839528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,992:0,16,255:30,0 chr1 13839529 . G . PASS END=13839536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1225:0,89,255:35,0 chr1 13839537 . G . PASS END=13839537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:32,0 chr1 13839538 . T . PASS END=13839538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:30,0 chr1 13839539 . C . PASS END=13839544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1235:0,88,255:31,0 chr1 13839545 . G . PASS END=13839545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1223:0,72,255:30,0 chr1 13839546 . C . PASS END=13839564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1310:0,92,255:35,0 chr1 13839565 . A . PASS END=13839565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 13839566 . G . PASS END=13839580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:35,0 chr1 13839581 . C . PASS END=13839588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:31:0,72,1080:0,80,255:26,0 chr1 13839589 . A . PASS END=13839589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:24,0 chr1 13839590 . G . PASS END=13839598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1003:0,73,255:25,0 chr1 13839599 . G . PASS END=13839601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 13839602 . T . PASS END=13839603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 13839604 . T . PASS END=13839605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 13839606 . G . PASS END=13839606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 13839607 . T . PASS END=13839607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:21,0 chr1 13839608 . C . PASS END=13839615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,937:0,62,255:26,0 chr1 13839616 . T . PASS END=13839616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:24,0 chr1 13839617 . C . PASS END=13839625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,917:0,64,255:25,0 chr1 13839626 . G . PASS END=13839626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,787:0,48,255:23,0 chr1 13839627 . C . PASS END=13839629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 13839630 . C . PASS END=13839630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 13839631 . G . PASS END=13839645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,881:0,61,255:24,0 chr1 13839646 . A . PASS END=13839647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 13839648 . G . PASS END=13839668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,878:0,69,255:24,0 chr1 13839669 . C . PASS END=13839669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:21,0 chr1 13839670 . A . PASS END=13839671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 13839672 . G . PASS END=13839672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 13839673 . T . PASS END=13839674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 13839675 . G . PASS END=13839675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 13839676 . T . PASS END=13839679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 13839680 . T . PASS END=13839725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,593:0,43,255:19,0 chr1 13839726 . G . PASS END=13839726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 13839727 . G . PASS END=13839727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 13839728 . C . PASS END=13839729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 13839730 . C . PASS END=13839741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:16,0 chr1 13839742 . A . PASS END=13839743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,580:0,35,255:16,0 chr1 13839744 . G . PASS END=13839745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 13839746 . T . PASS END=13839746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 13839747 . G . PASS END=13839747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 13839748 . T . PASS END=13839749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 13839750 . G . PASS END=13839786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 13839787 . C . PASS END=13839797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 13839798 . C . PASS END=13839808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,53,255:19,0 chr1 13839809 . A . PASS END=13839809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 13839810 . G . PASS END=13839810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 13839811 . C . PASS END=13839813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 13839814 . A . PASS END=13839814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 13839815 . G . PASS END=13839817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 13839818 . A . PASS END=13839818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 13839819 . G . PASS END=13839841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,762:0,61,255:26,0 chr1 13839842 . C . PASS END=13839842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 13839843 . C . PASS END=13839844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,984:0,65,255:26,0 chr1 13839845 . G . PASS END=13839846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 13839847 . T . PASS END=13839851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 13839852 . G . PASS END=13839862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 13839863 . A . PASS END=13839863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 13839864 . G . PASS END=13839864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 13839865 . A . PASS END=13839866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 13839867 . G . PASS END=13839870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 13839871 . T . PASS END=13839888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,933:0,78,255:26,0 chr1 13839889 . C . PASS END=13839890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 13839891 . G . PASS END=13839901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 13839902 . C . PASS END=13839903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 13839904 . A . PASS END=13839908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 13839909 . C . PASS END=13839913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 13839914 . G . PASS END=13839947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,68,255:26,0 chr1 13839948 . C . PASS END=13839950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 13839951 . C . PASS END=13839955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 13839956 . G . PASS END=13839973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 13839974 . T . PASS END=13839974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 13839975 . G . PASS END=13839983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 13839984 . G . PASS END=13839984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 13839985 . G . PASS END=13839990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 13839991 . G . PASS END=13839991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 13839992 . C . PASS END=13839997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 13839998 . C . PASS END=13839998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 13839999 . C . PASS END=13840000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 13840001 . C . PASS END=13840001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 13840002 . G . PASS END=13840006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 13840007 . A . PASS END=13840007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 13840008 . C . PASS END=13840010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 13840011 . G . PASS END=13840011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 13840012 . T . PASS END=13840014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 13840015 . C . PASS END=13840015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 13840016 . C . PASS END=13840017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr1 13840018 . G . PASS END=13840018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 13840019 . G . PASS END=13840025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 13840026 . C . PASS END=13840029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 13840030 . A . PASS END=13840034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:11:0,12,180:0,33,255:4,0 chr1 13840035 . A . LowGQ END=13840035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:4,0 chr1 13840036 . A . PASS END=13840036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,30,255:4,0 chr1 13840037 . G . PASS END=13840041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:6:7:0,6,90:0,21,255:3,0 chr1 13840042 . C . LowGQ END=13840088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,16:2,0 chr1 13910301 . A . PASS END=13910387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1150:0,86,255:38,0 chr1 13910388 . G . PASS END=13910388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:32,0 chr1 13910389 . G . PASS END=13910401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,98,255:34,0 chr1 13910402 . C . PASS END=13910406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:34:0,78,1170:0,102,255:26,0 chr1 13910407 . C . PASS END=13910407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 13910408 . T . PASS END=13910408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:26,0 chr1 13910409 . C . PASS END=13910410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 13910411 . G . PASS END=13910415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,1045:0,60,255:26,0 chr1 13910416 . C . PASS END=13910419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 13910420 . A . PASS END=13910420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,911:0,57,255:27,0 chr1 13910421 . C . PASS END=13910426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:30,0 chr1 13910427 . C . PASS END=13910430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1019:0,73,255:26,0 chr1 13910431 . C . PASS END=13910502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:38:0,90,1335:0,90,255:40,0 chr1 13910503 . A . PASS END=13910503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1319:0,73,255:34,0 chr1 13910504 . G . PASS END=13910505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr1 13910506 . A . PASS END=13910506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1272:0,70,255:32,0 chr1 13910507 . G . PASS END=13910518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:97:38:0,97,1313:0,97,255:36,0 chr1 13910519 . A . PASS END=13910519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1200:0,75,255:33,0 chr1 13910520 . A . PASS END=13910557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1170:0,81,255:37,0 chr1 13910558 . T . PASS END=13910558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1076:0,66,255:29,0 chr1 13910559 . T . PASS END=13910568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 13910569 . C . PASS END=13910569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 13910570 . G . PASS END=13910574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr1 13910575 . T . PASS END=13910575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:28,0 chr1 13910576 . C . PASS END=13910589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:29,0 chr1 13910590 . A . PASS END=13910590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 13910591 . A . PASS END=13910591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 13910592 . G . PASS END=13910595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,76,255:25,0 chr1 13910632 . A . PASS END=13910634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 13910635 . G . PASS END=13910635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 13910636 . G . PASS END=13910638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 13910639 . C . PASS END=13910672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,856:0,61,255:26,0 chr1 13910673 . T . PASS END=13910673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,787:0,44,255:20,0 chr1 13910674 . G . PASS END=13910677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 13910678 . T . PASS END=13910678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,703:0,36,255:19,0 chr1 13910679 . T . PASS END=13910683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 13922322 . G . PASS END=13922335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,840:0,69,255:24,0 chr1 13933668 . C . PASS END=13933670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 13933671 . G . PASS END=13933688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 13933689 . A . PASS END=13933689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1070:0,62,255:30,0 chr1 13933690 . T . PASS END=13933773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1158:0,84,255:40,0 chr1 13933774 . C . PASS END=13933792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:25,0 chr1 13933793 . A . PASS END=13933801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 13936882 . G . PASS END=13936891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:26,0 chr1 13936892 . G . PASS END=13936919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,928:0,81,255:36,0 chr1 13936920 . C . PASS END=13936920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr1 13936921 . G . PASS END=13937011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1260:0,92,255:40,0 chr1 13940182 . A . PASS END=13940220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:71:0,120,1800:0,199,255:40,0 chr1 13940795 . A . PASS END=13940826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,120,1800:0,144,255:40,0 chr1 13940827 . A . PASS END=13940863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,184,255:40,0 chr1 13940864 . C G, 295.88 PASS DP=83;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,83,0:1.000,0.000:83:0,46,0:0,37,0:246:334,249,0,3157,249,3157:255,250,0:0,0:2.9588e+02,2.4588e+02,0.0000e+00,4.5000e+02,2.8065e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,43:0,0,39,44 chr1 13940865 . A . PASS END=13940901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:78:0,120,1800:0,194,255:40,0 chr1 13940902 . T . PASS END=13940910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:80:0,120,1800:0,227,255:40,0 chr1 13942400 . G . PASS END=13942406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,137,255:40,0 chr1 14026535 . A . PASS END=14026564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 14026565 . C . LowGQ END=14026565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:10,0 chr1 14026566 . T . PASS END=14026595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 14026596 . G . PASS END=14026606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 14026607 . G . PASS END=14026608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 14026609 . C . PASS END=14026657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr1 14026658 . G . PASS END=14026690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 14026691 . C . PASS END=14026708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:9,0 chr1 14026709 . C . PASS END=14026711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 14026712 . C . PASS END=14026725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 14026726 . C . PASS END=14026732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 14026733 . C . PASS END=14026742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:4,0 chr1 14026743 . G . LowGQ END=14026743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:3,0 chr1 14026744 . C . PASS END=14026744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 14026745 . G . LowGQ END=14026745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:4,0 chr1 14026746 . G . PASS END=14026756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:5,0 chr1 14026757 . G . PASS END=14026783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 14026784 . C . LowDepth END=14026795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 14042101 . A . PASS END=14042109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:83:0,120,1800:0,233,255:40,0 chr1 14057495 . A . PASS END=14057495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 14057496 . A . PASS END=14057498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 14057499 . C . PASS END=14057499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 14057500 . T . PASS END=14057503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:14,0 chr1 14057504 . G . PASS END=14057510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:18,0 chr1 14057511 . T . PASS END=14057511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 14057512 . G . PASS END=14057525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 14057526 . C . PASS END=14057526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 14057527 . C . PASS END=14057527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 14057528 . C . PASS END=14057532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,747:0,60,255:23,0 chr1 14057533 . T . PASS END=14057533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:21,0 chr1 14057534 . G . PASS END=14057545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,864:0,69,255:25,0 chr1 14057546 . C . PASS END=14057548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 14057549 . G . PASS END=14057549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 14057550 . T . PASS END=14057550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 14057551 . G . PASS END=14057590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,825:0,62,255:26,0 chr1 14057591 . G . PASS END=14057591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 14057592 . C . PASS END=14057610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,756:0,66,255:22,0 chr1 14057611 . T . PASS END=14057611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 14057612 . G . PASS END=14057612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 14059274 . G . PASS END=14059369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:38:0,81,1215:0,86,255:40,0 chr1 14059370 . T . PASS END=14059375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 14059376 . A . PASS END=14059377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 14068500 . G . PASS END=14068501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 14068502 . G . PASS END=14068502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 14068503 . T . PASS END=14068503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 14068504 . A . PASS END=14068504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 14068505 . T . PASS END=14068505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 14068506 . T . PASS END=14068506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 14068507 . A . PASS END=14068510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 14068511 . A . PASS END=14068511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 14068512 . A . PASS END=14068514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1020:0,90,255:30,0 chr1 14068515 . T . PASS END=14068515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 14068516 . T . PASS END=14068652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:31:0,93,1149:0,93,255:40,0 chr1 14075856 . C . PASS END=14075876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 14075877 . C . PASS END=14075882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 14075883 . G . PASS END=14075903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 14075904 . A . PASS END=14075904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 14075905 . A . PASS END=14075925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,491:0,45,255:15,0 chr1 14075926 . T . PASS END=14075934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 14075935 . A . PASS END=14075935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr1 14075936 . G . PASS END=14075968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 14075969 . C . PASS END=14075971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 14075972 . G . PASS END=14075975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 14075976 . C . PASS END=14075982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 14099573 . G . PASS END=14099579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,223,255:40,0 chr1 14099580 . A . PASS END=14099683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:65:0,120,1800:0,192,255:40,0 chr1 14104913 . G . PASS END=14104914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 14104915 . C . PASS END=14104915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 14104916 . C . PASS END=14104918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:29,0 chr1 14104919 . A . PASS END=14104919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 14104920 . A . PASS END=14105633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:29:0,82,1025:0,82,255:40,2 chr1 14105634 . T . PASS END=14105634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:33,0 chr1 14105635 . C . PASS END=14105672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:34,0 chr1 14105673 . G . PASS END=14105673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 14105674 . A . PASS END=14105696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 14105697 . T . PASS END=14105733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:26,0 chr1 14105734 . C . PASS END=14105734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 14105735 . T . PASS END=14105737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,964:0,70,255:26,0 chr1 14105738 . A . PASS END=14105740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 14105741 . C . PASS END=14105741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 14105742 . G . PASS END=14105754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1028:0,80,255:30,0 chr1 14105755 . A . PASS END=14105755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 14105756 . A . PASS END=14105760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,973:0,90,255:30,0 chr1 14105761 . G . PASS END=14105761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:29,0 chr1 14105762 . T . PASS END=14105765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1050:0,90,255:30,0 chr1 14105766 . T . PASS END=14105766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:27,0 chr1 14105767 . G . PASS END=14105769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 14105770 . A . PASS END=14105771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 14105772 . T . PASS END=14105773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 14105774 . A . PASS END=14105774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 14105775 . T . PASS END=14105978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1109:0,80,255:40,0 chr1 14105979 . T . PASS END=14105979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1272:0,70,255:36,0 chr1 14105980 . G . PASS END=14105997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:40:0,84,1389:0,84,255:40,0 chr1 14105998 . A . PASS END=14105998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:40,0 chr1 14105999 . T . PASS END=14106210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,113,1404:0,113,255:40,0 chr1 14106211 . A . PASS END=14106211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1639:0,75,255:40,0 chr1 14106212 . C . PASS END=14106357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:36:0,82,1350:0,82,255:40,0 chr1 14106358 . A . PASS END=14106358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1187:0,56,255:29,0 chr1 14106359 . A . PASS END=14106359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1156:0,78,255:29,0 chr1 14106360 . G . PASS END=14106363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,94,255:30,0 chr1 14106364 . A . PASS END=14106364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1081:0,61,255:30,0 chr1 14106365 . A . PASS END=14106365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:41:38:0,41,1046:0,41,255:31,0 chr1 14106366 . A . PASS END=14106366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:30:38:0,30,934:0,30,255:28,0 chr1 14106367 . C . PASS END=14106368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1197:0,81,255:31,0 chr1 14106369 . A . PASS END=14106369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:31,0 chr1 14106370 . C . PASS END=14106370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1201:0,86,255:31,0 chr1 14106371 . T . PASS END=14106371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr1 14106372 . T . PASS END=14106455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1068:0,81,255:38,0 chr1 14106456 . T . PASS END=14106456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 14106457 . G . PASS END=14106644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:38:0,102,1314:0,103,255:40,0 chr1 14106645 . T . PASS END=14106645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1159:0,62,255:34,0 chr1 14106646 . T . PASS END=14106706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1247:0,85,255:39,0 chr1 14106707 . C . PASS END=14106707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:32,0 chr1 14106708 . T . PASS END=14106714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1274:0,91,255:34,0 chr1 14106715 . T . PASS END=14106715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1140:0,72,255:32,0 chr1 14106716 . G . PASS END=14107022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:31:0,83,1158:0,83,255:40,0 chr1 14107023 . G . PASS END=14107023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 14107024 . A . PASS END=14107048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1058:0,87,255:30,0 chr1 14107049 . A . PASS END=14107073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,941:0,68,255:26,0 chr1 14107074 . T . PASS END=14107075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 14107076 . C . PASS END=14107081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 14107082 . C . PASS END=14107085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 14107086 . T . PASS END=14107096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 14107097 . C . PASS END=14107097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:23,0 chr1 14107098 . T . PASS END=14107115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:25,0 chr1 14107116 . T . PASS END=14107117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 14107118 . A . PASS END=14107130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,781:0,72,255:24,0 chr1 14107131 . A . PASS END=14107131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 14107132 . T . PASS END=14107138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 14107139 . C . PASS END=14107162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,56,255:19,0 chr1 14107163 . C . PASS END=14107166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 14107167 . T . PASS END=14107197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:19,0 chr1 14107198 . C . PASS END=14107198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:16,0 chr1 14107199 . C . PASS END=14107204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,674:0,44,255:18,0 chr1 14107205 . C . PASS END=14107205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:17,0 chr1 14107206 . C . PASS END=14107215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 14107216 . T . LowGQ END=14107216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,499:5,0,255:14,0 chr1 14107217 . G . PASS END=14107222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:16,0 chr1 14107223 . C . PASS END=14107226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:13,0 chr1 14107227 . A . PASS END=14107227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:11,0 chr1 14107228 . T . PASS END=14107232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 14107233 . T . PASS END=14107233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 14107234 . G . PASS END=14107237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 14107238 . C . PASS END=14107238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 14107239 . C . PASS END=14107239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 14107240 . A . PASS END=14107240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 14107241 . C . PASS END=14107242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 14107243 . C . PASS END=14107245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:13,0 chr1 14107246 . C . PASS END=14107246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr1 14107247 . C . PASS END=14107247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 14107248 . C . LowGQ END=14107248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:5,0,255:12,0 chr1 14107249 . C . PASS END=14107249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 14107250 . C . PASS END=14107250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 14107251 . T . PASS END=14107252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,443:0,25,255:14,0 chr1 14107253 . C . PASS END=14107253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,468:0,31,255:15,0 chr1 14107254 . C . PASS END=14107255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 14107256 . T . PASS END=14107256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr1 14107257 . C . PASS END=14107257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 14107258 . C . PASS END=14107259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 14107260 . T . PASS END=14107261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:14:15:0,14,482:0,14,255:14,0 chr1 14107262 . C . PASS END=14107262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 14107263 . T . PASS END=14107264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:15:0,34,566:0,34,255:14,0 chr1 14107265 . C . PASS END=14107266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 14107267 . G . PASS END=14107268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 14107269 . A . PASS END=14107269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:14,0 chr1 14107270 . C . PASS END=14107271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 14107272 . T . PASS END=14107272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,476:0,9,255:15,0 chr1 14107273 . C . PASS END=14107273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr1 14107274 . T . PASS END=14107274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 14107275 . T . PASS END=14107275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:15,0 chr1 14107276 . C . PASS END=14107276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:15,0 chr1 14107277 . C . PASS END=14107277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 14107278 . A . PASS END=14107278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 14107279 . G . PASS END=14107279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:15,0 chr1 14107280 . C . PASS END=14107280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,499:0,12,255:15,0 chr1 14107281 . C . LowGQ END=14107281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:4,0,255:14,0 chr1 14107282 . C . PASS END=14107282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 14107283 . C . PASS END=14107284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 14107285 . T . PASS END=14107286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,521:0,34,255:14,0 chr1 14107287 . T . PASS END=14107287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:14,0 chr1 14107288 . T . LowGQ END=14107288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:1,0,255:14,0 chr1 14107289 . C . PASS END=14107289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:14,0 chr1 14107290 . C . PASS END=14107290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 14107291 . A . PASS END=14107291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:14,0 chr1 14107292 . G . PASS END=14107292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:17,0 chr1 14107293 . T . PASS END=14107293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,590:0,10,255:16,0 chr1 14107294 . G . PASS END=14107294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:16,0 chr1 14107295 . C . PASS END=14107296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,501:0,21,255:16,0 chr1 14107297 . T . PASS END=14107299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,590:0,40,255:17,0 chr1 14107300 . C . PASS END=14107300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:16,0 chr1 14107301 . C . PASS END=14107301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 14107302 . A . PASS END=14107303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:12,0 chr1 14107304 . A . LowGQ END=14107304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,576:10,0,255:12,0 chr1 14107305 . C . PASS END=14107307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,47,255:13,0 chr1 14107308 . A . PASS END=14107308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,513:0,10,255:13,0 chr1 14107309 . T . PASS END=14107309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,535:0,2,255:13,0 chr1 14107310 . G . PASS END=14107310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:13,0 chr1 14107311 . C . PASS END=14107313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:16,0 chr1 14107314 . C . PASS END=14107314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 14107315 . T . PASS END=14107315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,523:0,23,255:16,0 chr1 14107316 . C . PASS END=14107316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,537:0,15,255:16,0 chr1 14107317 . T . PASS END=14107317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,443:0,4,255:15,0 chr1 14107318 . C . PASS END=14107319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 14107320 . A . PASS END=14107320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:16,0 chr1 14107321 . C . PASS END=14107324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:16,0 chr1 14107325 . C . PASS END=14107325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 14107326 . A . PASS END=14107326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr1 14107327 . A . PASS END=14107328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,505:0,15,255:16,0 chr1 14107329 . T . LowGQ END=14107329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,444:2,0,255:14,0 chr1 14107330 . G . PASS END=14107330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:15,0 chr1 14107331 . C . PASS END=14107335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,660:0,43,255:19,0 chr1 14107336 . G . PASS END=14107336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,672:0,35,255:20,0 chr1 14107337 . C . PASS END=14107339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 14107340 . A . PASS END=14107340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 14107341 . G . PASS END=14107348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr1 14107349 . T . PASS END=14107349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 14107350 . T . PASS END=14107357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:23,0 chr1 14107358 . T . PASS END=14107358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,697:0,36,255:21,0 chr1 14107359 . G . PASS END=14107361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 14107362 . C . PASS END=14107365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 14107366 . A . PASS END=14107366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 14107367 . C . PASS END=14107368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 14107369 . G . PASS END=14107369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,623:0,35,255:20,0 chr1 14107370 . T . PASS END=14107372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 14107373 . C . PASS END=14107373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,579:0,35,255:20,0 chr1 14107374 . C . PASS END=14107374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:21,0 chr1 14107375 . C . PASS END=14107377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 14107378 . T . PASS END=14107378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:16:24:0,16,654:0,16,255:22,0 chr1 14107379 . C . PASS END=14107383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,772:0,69,255:25,0 chr1 14107384 . T . PASS END=14107384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:23,0 chr1 14107385 . C . PASS END=14107387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 14107388 . C . PASS END=14107389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 14107390 . A . PASS END=14107393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,903:0,67,255:26,0 chr1 14107394 . C . PASS END=14107395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 14107396 . C . PASS END=14107396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 14107397 . C . PASS END=14107398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 14107399 . G . PASS END=14107399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,950:0,60,255:29,0 chr1 14107400 . T . PASS END=14107400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1017:0,54,255:29,0 chr1 14107401 . G . PASS END=14107401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:28,0 chr1 14107402 . G . PASS END=14107403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 14107404 . G . PASS END=14107404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 14107405 . C . PASS END=14107411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:37:0,95,1357:0,95,255:40,0 chr1 14107412 . T . PASS END=14107412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:53:41:0,53,1277:0,53,255:38,0 chr1 14107413 . G . PASS END=14107428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:92:41:0,92,1240:0,92,255:40,0 chr1 14107429 . G . PASS END=14107429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:7:44:0,7,1281:0,7,255:39,0 chr1 14107430 . G . PASS END=14107439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:44:0,96,1474:0,96,255:40,0 chr1 14107440 . A . PASS END=14107440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1406:0,66,255:40,0 chr1 14107441 . C . PASS END=14107441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 14107442 . T . PASS END=14107442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:46:47:0,46,1377:0,46,255:40,0 chr1 14107443 . T . PASS END=14107531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,101,1677:0,101,255:40,0 chr1 14107532 . T . PASS END=14107532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:72:51:0,72,1517:0,72,255:38,0 chr1 14107533 . A . PASS END=14108056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:35:0,87,1259:0,87,255:40,0 chr1 14108057 . C . PASS END=14108057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:70:51:0,70,1616:0,70,255:40,0 chr1 14108058 . T . PASS END=14108061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1755:0,120,255:40,0 chr1 14108062 . G . PASS END=14108062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:64:53:0,64,1686:0,64,255:40,0 chr1 14108063 . A . PASS END=14108071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:83:54:0,83,1693:0,83,255:40,0 chr1 14108072 . A . PASS END=14108072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,6:57:5:57:0,5,1721:0,5,255:40,0 chr1 14108073 . G . PASS END=14108073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:69:57:0,69,1845:0,69,255:40,0 chr1 14108074 . T . PASS END=14108079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,101,1709:0,101,255:40,0 chr1 14108080 . G . PASS END=14108080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:74:57:0,74,1812:0,74,255:40,0 chr1 14108081 . A . PASS END=14108084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:99:55:0,118,1800:0,118,255:40,0 chr1 14108085 . C . PASS END=14108085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:75:53:0,75,1503:0,75,255:40,0 chr1 14108086 . T . PASS END=14108086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 14108087 . C . PASS END=14108087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,9:54:13:54:0,13,1461:0,13,255:40,0 chr1 14108088 . T . PASS END=14108088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 14108089 . G . PASS END=14108089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:65:55:0,65,1607:0,65,255:40,0 chr1 14108090 . A . PASS END=14108092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:54:0,100,1631:0,100,255:40,0 chr1 14108093 . A . PASS END=14108093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:58:52:0,58,1327:0,58,255:40,0 chr1 14108094 . G . PASS END=14108094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,154,255:40,0 chr1 14108095 . C . PASS END=14108095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,8:57:24:57:0,24,1470:0,24,255:40,0 chr1 14108096 . T . PASS END=14108703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:42:0,108,1559:0,108,255:40,0 chr1 14108704 . A . PASS END=14108721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:41:0,87,1305:0,92,255:40,1 chr1 14108722 . T . PASS END=14108722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:30,0 chr1 14108723 . G . PASS END=14108747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1302:0,92,255:33,0 chr1 14108748 . C . LowGQ END=14108750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:0:38:0,0,1075:19,0,255:37,7 chr1 14108751 . A . PASS END=14108794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:38:0,91,1373:0,91,255:40,0 chr1 14108795 . C . PASS END=14108802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,102,1530:0,123,255:36,0 chr1 14108803 . A . PASS END=14108803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:33,0 chr1 14108804 . G . PASS END=14108828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,92,255:34,0 chr1 14108829 . C . PASS END=14108831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:26,0 chr1 14108832 . C . PASS END=14108836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:27,0 chr1 14108837 . G . PASS END=14108839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1170:0,75,255:26,0 chr1 14108840 . C . PASS END=14108843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 14108844 . G . PASS END=14108844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 14108845 . G . PASS END=14108846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 14108847 . T . PASS END=14108848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 14108849 . C . PASS END=14108851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 14108852 . A . PASS END=14108852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 14108853 . G . PASS END=14108858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 14108859 . A . PASS END=14108864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1047:0,71,255:27,0 chr1 14108865 . A . PASS END=14109061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1260:0,87,255:40,0 chr1 14109062 . A . PASS END=14109062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:28,0 chr1 14109063 . A . PASS END=14109104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1303:0,95,255:35,0 chr1 14109105 . C . PASS END=14109105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,2 chr1 14109106 . A . PASS END=14109106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1287:0,42,255:33,2 chr1 14109107 . A . PASS END=14109107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr1 14109108 . A . PASS END=14109215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1206:0,81,255:38,0 chr1 14109216 . A . PASS END=14109216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr1 14109217 . G . PASS END=14109219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 14109220 . C . PASS END=14109220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 14109221 . G . PASS END=14109258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:36,0 chr1 14109259 . G . PASS END=14109260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:24,0 chr1 14109261 . T . PASS END=14109261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:23,0 chr1 14109262 . G . PASS END=14109286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,71,255:26,0 chr1 14109287 . G . PASS END=14109290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 14109291 . G . PASS END=14109293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 14109294 . C . PASS END=14109321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:19,0 chr1 14109322 . T . PASS END=14109322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 14109323 . T . PASS END=14109323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 14109324 . C . PASS END=14109324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 14109325 . A . PASS END=14109326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 14113010 . G . PASS END=14113022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:103:0,120,1800:0,255,255:40,0 chr1 14142922 . C . PASS END=14142965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1349:0,95,255:40,0 chr1 14142966 . C . PASS END=14143002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,138,255:40,0 chr1 14143003 . A G, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.188;ReadPosRankSum=3.935;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,32,0:0.593,0.000:54:9,5,0:13,27,0:47:85,0,47,1145,787,1931:255,0,255:22,0:5.0000e+01,8.6719e-05,5.0001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,18,14:8,14,15,17 chr1 14143004 . G . PASS END=14143040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:45:0,108,1620:0,128,255:40,0 chr1 14143041 . A . PASS END=14143065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1415:0,82,255:38,0 chr1 14149654 . C . PASS END=14149659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,170,255:40,0 chr1 14149660 . A . PASS END=14149679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:61:0,120,1800:0,128,255:40,0 chr1 14220131 . A . PASS END=14220133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 14220134 . A . PASS END=14220251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:80:28:0,80,1099:0,80,255:40,0 chr1 14506930 . C . PASS END=14507068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1164:0,88,255:40,0 chr1 14507069 . C . PASS END=14507078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:27:0,60,900:0,77,255:24,0 chr1 14507079 . G . PASS END=14507081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:56:24:0,56,855:0,56,255:19,0 chr1 14507082 . G . PASS END=14507082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr1 14507083 . C . PASS END=14507087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 14631085 . A . PASS END=14631153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,107,1369:0,107,255:40,0 chr1 14925479 . G . PASS END=14925479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 14925480 . C . PASS END=14925493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:23,0 chr1 14925494 . A . PASS END=14925494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 14925495 . T . PASS END=14925496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 14925497 . A . PASS END=14925497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr1 14925498 . T . PASS END=14925507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 14925508 . T . PASS END=14925508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 14925509 . A . PASS END=14925521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 14925522 . T . PASS END=14925522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 14925523 . C . PASS END=14925523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 14925524 . C . PASS END=14925524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 14925525 . G . PASS END=14925536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 14925537 . C . PASS END=14925537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 14925538 . G . PASS END=14925539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 14925540 . T . PASS END=14925579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,631:0,51,255:19,0 chr1 14925580 . A . PASS END=14925580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 14925581 . C . PASS END=14925593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,645:0,54,255:18,0 chr1 14925594 . A . PASS END=14925594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,477:0,37,255:14,0 chr1 14925595 . C . PASS END=14925607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,621:0,41,255:19,0 chr1 14925608 . G . PASS END=14925609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 14925610 . A . PASS END=14925610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 14925611 . C . PASS END=14925611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 14925612 . T . PASS END=14925612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 14925613 . G . PASS END=14925616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 14925617 . G . PASS END=14925617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 14925618 . G . PASS END=14925621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:21,0 chr1 14925622 . C . PASS END=14925622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 14925623 . G . PASS END=14925628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 14925629 . C . PASS END=14925637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:18,0 chr1 14925638 . G . PASS END=14925674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:23,0 chr1 14925675 . A . PASS END=14925675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 14925676 . C . PASS END=14925686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 14925687 . C . PASS END=14925692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 14925693 . T . PASS END=14925693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:17,0 chr1 14925694 . G . PASS END=14925696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 14925697 . G . PASS END=14925697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:17,0 chr1 14925698 . A . PASS END=14925708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,720:0,47,255:19,0 chr1 14925709 . T . PASS END=14925709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 14925710 . G . PASS END=14925719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:19,0 chr1 15250861 . A . LowDepth;LowGQ END=15251063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:3,0 chr1 15251064 . G . PASS END=15251067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 15251068 . G . PASS END=15251077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 15251078 . C . PASS END=15251081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 15251082 . G . PASS END=15251085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 15251086 . G . PASS END=15251099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 15251100 . G A, 0.08 DRAGENSnpHardQUAL DP=7;MQ=242.01;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:2,0,0:4,1,0:17:18,0,50,36,214,250:18,0,212:6,0:8.4513e-02,1.7152e+01,7.0152e+01,5.2913e+01,2.6641e+02,2.7040e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,0,1:5,1,1,0 chr1 15251101 . G . PASS END=15251107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 15251108 . C . PASS END=15251109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 15251110 . C . PASS END=15251120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 15251121 . G . LowGQ END=15251121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,258:9,0,255:9,0 chr1 15251122 . C . PASS END=15251128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,333:0,27,255:9,0 chr1 15251129 . G . PASS END=15251136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 15251137 . G . PASS END=15251139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 15251140 . C . PASS END=15251140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 15251141 . G . PASS END=15251142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 15251143 . G . PASS END=15251160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 15251161 . T . PASS END=15251161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 15251162 . C . PASS END=15251181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 15251182 . A . PASS END=15251182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 15251183 . G . PASS END=15251246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,613:0,48,255:19,0 chr1 15256200 . A . PASS END=15256251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:34:0,102,1204:0,102,255:40,0 chr1 15256370 . G . PASS END=15256484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1260:0,81,255:40,0 chr1 15256485 . A . PASS END=15256499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1000:0,74,255:26,0 chr1 15256500 . A . PASS END=15256501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 15256502 . C . PASS END=15256512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 15256513 . G . PASS END=15256515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15256516 . A . PASS END=15256516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 15256517 . T . PASS END=15256521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15256522 . A . PASS END=15256536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 15256537 . A . PASS END=15256540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 15287180 . T . PASS END=15287181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 15287182 . C . PASS END=15287183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 15287184 . C . PASS END=15287185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 15287186 . T . PASS END=15287198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,631:0,43,255:19,0 chr1 15287199 . G . PASS END=15287206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:21,0 chr1 15287207 . T . PASS END=15287207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 15287208 . C . PASS END=15287212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 15287213 . A . PASS END=15287213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 15287214 . G . PASS END=15287244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:25,0 chr1 15287245 . A . PASS END=15287245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 15287246 . T . PASS END=15287267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:25,0 chr1 15287268 . G . PASS END=15287273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15287274 . G . PASS END=15287274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 15287275 . G . PASS END=15287279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15287280 . C . PASS END=15287316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr1 15287317 . G . PASS END=15287320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15287321 . A . PASS END=15287321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 15287322 . G . PASS END=15287322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15287323 . C . PASS END=15287360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,930:0,62,255:26,0 chr1 15287361 . A . PASS END=15287371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 15361245 . C . PASS END=15361249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 15361250 . A . PASS END=15361250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:26,0 chr1 15361251 . A . PASS END=15361258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1070:0,84,255:31,0 chr1 15361259 . C . PASS END=15361259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 15361260 . G . PASS END=15361268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1164:0,83,255:35,0 chr1 15361269 . T . PASS END=15361269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:33,0 chr1 15361270 . A . PASS END=15361342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1263:0,89,255:40,0 chr1 15361343 . C . PASS END=15361343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:34,0 chr1 15361344 . T . PASS END=15361372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1194:0,86,255:35,0 chr1 15361373 . C . PASS END=15361381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:26,0 chr1 15370485 . G . PASS END=15370495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 15370496 . T . PASS END=15370496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 15370497 . G . PASS END=15370502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,881:0,81,255:27,0 chr1 15370503 . A . PASS END=15370503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,850:0,64,255:26,0 chr1 15370504 . A . PASS END=15370508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 15370509 . C . PASS END=15370509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 15370510 . T . PASS END=15370511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr1 15370512 . G . PASS END=15370512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 15370513 . C . PASS END=15370546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1133:0,90,255:35,0 chr1 15370547 . G . PASS END=15370547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 15370548 . G . PASS END=15370550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 15370551 . C . PASS END=15370551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 15370552 . T . PASS END=15370574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1209:0,86,255:34,0 chr1 15370575 . A . PASS END=15370578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 15370579 . A . PASS END=15370579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 15370580 . C . PASS END=15370626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 15370627 . T . PASS END=15370627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 15370628 . G . PASS END=15370633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:21,0 chr1 15370634 . G . PASS END=15370634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,462:0,13,255:18,0 chr1 15370635 . C . PASS END=15370646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 15370647 . C . PASS END=15370655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:19,0 chr1 15382587 . G . PASS END=15382596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:26,0 chr1 15382597 . C . PASS END=15382620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,1016:0,80,255:32,0 chr1 15382621 . T . PASS END=15382621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1129:0,69,255:32,0 chr1 15382622 . C . PASS END=15382646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:34:0,84,1257:0,89,255:34,0 chr1 15382647 . C . PASS END=15382647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 15382648 . C . PASS END=15382678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1065:0,82,255:29,0 chr1 15382679 . G . PASS END=15382715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 15382716 . A . PASS END=15382719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 15382720 . G . PASS END=15382743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,893:0,64,255:26,0 chr1 15382744 . A . PASS END=15382747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 15382748 . A . PASS END=15382767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:23,0 chr1 15382768 . A . PASS END=15382776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,46,255:19,0 chr1 15386668 . C . PASS END=15386668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 15386669 . G . PASS END=15386688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,725:0,60,255:24,0 chr1 15386689 . A . PASS END=15386689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 15386690 . C . PASS END=15386699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 15386700 . C . PASS END=15386700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 15386701 . C . PASS END=15386701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 15386702 . C . PASS END=15386703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 15386704 . C . PASS END=15386710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 15386711 . C . PASS END=15386714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 15386715 . G . PASS END=15386717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 15386718 . G . PASS END=15386741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,993:0,84,255:29,0 chr1 15386742 . T . PASS END=15386749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 15386750 . A . PASS END=15386750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:26,0 chr1 15386751 . C . PASS END=15386766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 15386767 . C . PASS END=15386767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 15386768 . C . PASS END=15386770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 15386771 . T . PASS END=15386773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 15386774 . A . PASS END=15386776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 15386777 . C . PASS END=15386795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 15386796 . A . PASS END=15386798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 15390068 . G . PASS END=15390118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:35:0,87,1351:0,87,255:40,0 chr1 15390222 . G . PASS END=15390278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:43:0,82,1432:0,82,255:40,0 chr1 15390279 . G . PASS END=15390279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:75:46:0,75,1571:0,75,255:40,0 chr1 15390280 . G . PASS END=15390305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:83:45:0,83,1551:0,83,255:40,0 chr1 15390400 . A . PASS END=15390420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1296:0,92,255:36,0 chr1 15392126 . T . PASS END=15392128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:25,0 chr1 15392129 . C . PASS END=15392130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 15392131 . A . PASS END=15392133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15392134 . G . PASS END=15392138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 15392139 . T . PASS END=15392139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 15392140 . T . PASS END=15392172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,945:0,80,255:32,0 chr1 15392173 . G . PASS END=15392173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr1 15392174 . A . PASS END=15392244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:33:0,81,1175:0,85,255:38,0 chr1 15392245 . T . PASS END=15392250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 15392251 . T . PASS END=15392251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:25,0 chr1 15392252 . A . PASS END=15392254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 15392255 . G . PASS END=15392255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,999:0,71,255:26,0 chr1 15392256 . C . PASS END=15392262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 15392263 . T . PASS END=15392263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:27,0 chr1 15392264 . T . PASS END=15392265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 15392266 . T . PASS END=15392286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,900:0,67,255:26,0 chr1 15392287 . C . PASS END=15392293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 15420676 . A . PASS END=15420676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 15420677 . C . PASS END=15420688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 15420689 . G . PASS END=15420756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,560:0,48,255:19,0 chr1 15420757 . T . PASS END=15420760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15420761 . G . PASS END=15420763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 15420764 . G . PASS END=15420771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 15420772 . C . PASS END=15420838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,43,255:19,0 chr1 15420839 . T . PASS END=15420864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,458:0,39,255:13,0 chr1 15420865 . A . PASS END=15420865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 15420866 . C . PASS END=15420881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 15421311 . G . PASS END=15421315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 15421316 . G . PASS END=15421354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,48,255:19,0 chr1 15421355 . G . PASS END=15421355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 15421356 . G . PASS END=15421357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 15421358 . G . PASS END=15421358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 15421359 . T . PASS END=15421359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 15421360 . G . PASS END=15421362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 15421363 . G . PASS END=15421365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,836:0,53,255:19,0 chr1 15421366 . C . PASS END=15421368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 15421369 . T . PASS END=15421369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:19,0 chr1 15421370 . G . PASS END=15421373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 15421374 . C . PASS END=15421380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 15421381 . A . PASS END=15421385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:20,0 chr1 15421386 . C . PASS END=15421429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 15425424 . G . PASS END=15425430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 15428039 . C . PASS END=15428054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,623:0,41,255:19,0 chr1 15428055 . G . PASS END=15428062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,839:0,66,255:23,0 chr1 15428063 . C . PASS END=15428063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 15428064 . C . PASS END=15428070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:25,0 chr1 15428071 . G . PASS END=15428071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 15428072 . G . PASS END=15428079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,947:0,75,255:26,0 chr1 15428080 . A . PASS END=15428081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15428082 . G . PASS END=15428082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 15428083 . C . PASS END=15428085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 15428086 . G . PASS END=15428086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 15428087 . G . PASS END=15428096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1063:0,84,255:29,0 chr1 15428097 . A . PASS END=15428097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 15428098 . T . PASS END=15428136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1305:0,92,255:39,0 chr1 15428137 . T . PASS END=15428137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:37,0 chr1 15428138 . G . PASS END=15428270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:35:0,91,1395:0,91,255:40,0 chr1 15429855 . G . PASS END=15429857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,908:0,72,255:26,0 chr1 15429858 . C . PASS END=15429858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 15429859 . T . PASS END=15429859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:28,0 chr1 15429860 . C . PASS END=15429862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 15429863 . G . PASS END=15429863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 15429864 . G . PASS END=15429866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 15429867 . C . PASS END=15429867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 15429868 . G . PASS END=15429876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 15429877 . G . PASS END=15429877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 15429878 . C . PASS END=15429916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:36,0 chr1 15429917 . C . PASS END=15429917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 15429918 . C . PASS END=15429948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:34,0 chr1 15429949 . A . PASS END=15429949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 15429950 . C . PASS END=15429953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 15429954 . A . PASS END=15429956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 15430519 . G . PASS END=15430524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 15430525 . G . PASS END=15430525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 15430526 . C . PASS END=15430537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 15430538 . C . PASS END=15430609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,693:0,60,255:25,0 chr1 15430610 . T . PASS END=15430610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 15430611 . G . PASS END=15430632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 15430633 . A . PASS END=15430659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 15430660 . A . PASS END=15430661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 15430662 . G . PASS END=15430665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 15430666 . G . PASS END=15430685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,474:0,39,255:13,0 chr1 15438923 . C . PASS END=15438952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,922:0,72,255:26,0 chr1 15438953 . T . PASS END=15438959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,945:0,75,255:25,0 chr1 15438960 . C . PASS END=15438961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 15438962 . C . PASS END=15438970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 15438971 . G . PASS END=15438971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 15438972 . G . PASS END=15438981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 15438982 . T . PASS END=15438983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 15438984 . A . PASS END=15438986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 15438987 . C . PASS END=15438987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:24,0 chr1 15438988 . G . PASS END=15438989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 15438990 . G A, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:84:172,87,0,1122,87,1122:255,87,0:0,0:1.3428e+02,8.4282e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,10:0,0,15,14 chr1 15438991 . C . PASS END=15438993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:27,0 chr1 15438994 . G . PASS END=15439019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1141:0,87,255:30,0 chr1 15439020 . A . PASS END=15439020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 15439021 . A . PASS END=15439021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:25,0 chr1 15439022 . G . PASS END=15439022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 15439023 . T . PASS END=15439023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 15439024 . A . PASS END=15439027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 15439028 . G . PASS END=15439049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr1 15439050 . A . PASS END=15439123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,840:0,61,255:26,0 chr1 15439124 . G . PASS END=15439130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 15439131 . T . PASS END=15439131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15439132 . G . PASS END=15439132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15439133 . T . PASS END=15439154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,963:0,65,255:26,0 chr1 15439155 . G . PASS END=15439159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 15439160 . G . PASS END=15439165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:25,0 chr1 15439166 . A . PASS END=15439166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 15439167 . T . PASS END=15439214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,917:0,62,255:26,0 chr1 15439215 . T . PASS END=15439251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1055:0,87,255:31,0 chr1 15439252 . T . PASS END=15439252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 15439253 . A . PASS END=15439258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 15439259 . T . PASS END=15439259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 15439260 . G . PASS END=15439262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 15439263 . T . PASS END=15439263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 15439264 . C . PASS END=15439298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1064:0,90,255:32,0 chr1 15439299 . C . PASS END=15439299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 15439300 . A . PASS END=15439303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 15439304 . G . PASS END=15439347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,925:0,72,255:26,0 chr1 15439348 . C . PASS END=15439351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:29,0 chr1 15439352 . G . PASS END=15439362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:25,0 chr1 15439363 . C . PASS END=15439363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 15439364 . T . PASS END=15439368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 15439369 . G . PASS END=15439375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:33,0 chr1 15439376 . G . PASS END=15439412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1233:0,86,255:40,0 chr1 15439413 . G A, 185.44 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,18,0:0,28,0:135:223,138,0,1773,138,1773:255,138,0:0,0:1.8544e+02,1.3544e+02,0.0000e+00,4.5000e+02,1.7021e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,23:0,0,23,23 chr1 15439414 . G . PASS END=15439441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:43:0,81,1215:0,116,255:40,0 chr1 15439442 . A . PASS END=15439458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:60:45:0,60,900:0,119,255:25,0 chr1 15439459 . A . PASS END=15439463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:45:46:0,45,675:0,138,255:18,0 chr1 15439464 . A . PASS END=15439467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:30:46:0,30,450:0,138,255:12,0 chr1 15439468 . A . PASS END=15439472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:21:45:0,21,315:0,135,255:8,0 chr1 15439473 . A . PASS END=15439479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:12:44:0,12,180:0,116,255:6,0 chr1 15439480 . G . LowGQ END=15439489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:44,0:44:0:43:0,0,0:0,129,255:3,0 chr1 15439490 . AC A, 179.40 PASS DP=44;MQ=249.54;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,20,0:0,24,0:129:211,132,0,1580,132,1580:255,77,0:1,70:1.7940e+02,1.2940e+02,0.0000e+00,4.5000e+02,1.6417e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,19,25:0,0,17,27 chr1 15439491 . C . LowGQ END=15439492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,71:72:0:44:0,0,0:255,63,0:39,70 chr1 15439493 . C . PASS END=15439520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:36:0,81,1294:0,81,255:40,0 chr1 15440967 . C . PASS END=15440971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 15440972 . C . PASS END=15440972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 15440973 . C . PASS END=15440991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,831:0,64,255:26,0 chr1 15440992 . G . PASS END=15440992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 15440993 . C . PASS END=15441011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:31,0 chr1 15441012 . G . PASS END=15441012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 15441013 . A . PASS END=15441014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr1 15441015 . T . PASS END=15441015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 15441016 . T . PASS END=15441033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1180:0,83,255:33,0 chr1 15441034 . C . PASS END=15441034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:32,0 chr1 15441035 . T . PASS END=15441072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1157:0,82,255:34,0 chr1 15441073 . G . PASS END=15441075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:25,0 chr1 15441076 . G . PASS END=15441096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 15441097 . A . PASS END=15441125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,740:0,66,255:23,0 chr1 15441126 . G . PASS END=15441131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:19,0 chr1 15490840 . T . PASS END=15490924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:37:0,95,1267:0,95,255:40,0 chr1 15490925 . C . PASS END=15490957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1338:0,93,255:40,0 chr1 15494991 . T . PASS END=15495002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,878:0,64,255:26,0 chr1 15495003 . G . PASS END=15495007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1066:0,87,255:31,0 chr1 15495008 . T . PASS END=15495008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 15495009 . A . PASS END=15495012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 15495013 . T . PASS END=15495013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 15495014 . T . PASS END=15495021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1133:0,93,255:31,0 chr1 15495022 . G . PASS END=15495022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 15495023 . G . PASS END=15495072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:31:0,83,1194:0,83,255:37,0 chr1 15495073 . A . PASS END=15495109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,103,1352:0,103,255:39,0 chr1 15495110 . A G, 49.29 PASS DP=42;MQ=249.81;MQRankSum=5.509;ReadPosRankSum=3.588;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:12,11,0:11,8,0:48:84,0,50,671,793,1464:255,0,255:20,0:4.9286e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,14,11,8:14,9,11,8 chr1 15495111 . G . PASS END=15495147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,108,1302:0,109,255:40,0 chr1 15495148 . A . PASS END=15495192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:35:0,90,1350:0,105,255:40,0 chr1 15495193 . T . PASS END=15495193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,990:0,71,255:29,0 chr1 15495194 . C . PASS END=15495197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1142:0,85,255:29,0 chr1 15495198 . C . PASS END=15495230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,930:0,72,255:25,0 chr1 15495231 . A . PASS END=15495231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 15495232 . G . PASS END=15495252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 15495253 . T . PASS END=15495273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 15497677 . C . PASS END=15497689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:41:0,89,1488:0,89,255:40,0 chr1 15497690 . A . PASS END=15497726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,106,1800:0,106,255:40,1 chr1 15497727 . T C, 203.50 PASS DP=53;MQ=250.00;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,19,0:0,33,0:154:241,157,0,2003,157,2003:255,162,0:0,1:2.0350e+02,1.5350e+02,0.0000e+00,4.5000e+02,1.8827e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,31:0,0,22,30 chr1 15497728 . C . PASS END=15497764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:49:0,96,1735:0,96,255:40,1 chr1 15497765 . A . PASS END=15497774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:42:0,102,1530:0,125,255:40,0 chr1 15541584 . A . PASS END=15541594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,243:8,0 chr1 15541595 . G . PASS END=15541595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 15541596 . T . PASS END=15541601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 15541602 . G A, 0.01 DRAGENSnpHardQUAL DP=10;MQ=250.00;MQRankSum=1.393;ReadPosRankSum=-1.044;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:7,0,0:2,1,0:26:9,0,50,36,293,329:9,0,255:9,0:1.1855e-02,2.5646e+01,7.8646e+01,6.1406e+01,3.5342e+02,3.5741e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,2,0,1:5,4,1,0 chr1 15541603 . C . PASS END=15541613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,356:0,30,255:12,0 chr1 15541614 . C . PASS END=15541627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:16,0 chr1 15541628 . C . PASS END=15541628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 15541629 . G . PASS END=15541637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 15541638 . C . PASS END=15541638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 15541639 . T . PASS END=15541639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 15541640 . G . PASS END=15541652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,631:0,54,255:19,0 chr1 15541653 . C . PASS END=15541657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 15541658 . G . PASS END=15541658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 15541659 . G . PASS END=15541660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 15541661 . G . PASS END=15541661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 15541662 . A . PASS END=15541680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 15541681 . T . PASS END=15541681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 15541682 . G . PASS END=15541696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 15541697 . C . PASS END=15541697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 15541698 . G . PASS END=15541698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15541699 . C . PASS END=15541710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,698:0,57,255:19,0 chr1 15541711 . C . PASS END=15541711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 15541712 . A . PASS END=15541720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,623:0,41,255:19,0 chr1 15541721 . G . PASS END=15541730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 15541731 . A . PASS END=15541731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 15541732 . A . PASS END=15541763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:23,0 chr1 15541764 . A . PASS END=15541773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,685:0,52,255:19,0 chr1 15541774 . C . PASS END=15541785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 15541786 . T . PASS END=15541793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 15541794 . G . PASS END=15541866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,352:0,30,255:13,0 chr1 15541867 . A . PASS END=15541878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 15541879 . A . PASS END=15541927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:11:5:0,11,164:0,11,164:6,0 chr1 15545822 . C . PASS END=15546178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:38:0,89,1366:0,89,255:40,0 chr1 15546179 . T . PASS END=15546179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:28,0 chr1 15546180 . C . PASS END=15546188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1215:0,98,255:28,0 chr1 15546189 . C . PASS END=15546191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 15546192 . T . PASS END=15546192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 15546193 . A . PASS END=15546193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 15546194 . T . PASS END=15546198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 15546199 . A . PASS END=15546206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 15546207 . G . PASS END=15546207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:24,0 chr1 15546208 . A . PASS END=15546209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 15546210 . A . PASS END=15546210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15546211 . A . PASS END=15546230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,984:0,65,255:24,0 chr1 15546231 . C . PASS END=15546231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 15546232 . C . PASS END=15546234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 15546235 . A . PASS END=15546235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 15546236 . C . PASS END=15546238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 15546239 . A . PASS END=15546239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 15563221 . A . PASS END=15563257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,138,255:40,0 chr1 15573776 . G . PASS END=15573790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 15573791 . G . LowGQ END=15573792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 15573793 . A . PASS END=15573793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 15573794 . G . LowGQ END=15573794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 15573795 . C . PASS END=15573812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 15573813 . C . PASS END=15573821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 15573822 . T . PASS END=15573822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 15573823 . G . PASS END=15573866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 15573867 . A . PASS END=15573867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 15573868 . G . PASS END=15573891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,164:5,0 chr1 15578267 . G . PASS END=15578373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:46:0,120,1800:0,124,255:40,0 chr1 15598819 . T . PASS END=15598829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,807:0,66,255:26,0 chr1 15598830 . C . PASS END=15598830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 15598831 . G . PASS END=15598834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 15598835 . A . PASS END=15598843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:30,0 chr1 15598844 . C . PASS END=15598844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 15598845 . A . PASS END=15598861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1078:0,80,255:31,0 chr1 15598862 . A . PASS END=15598862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 15598863 . G . PASS END=15598867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 15598868 . A . PASS END=15598868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 15598869 . G . PASS END=15598879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1156:0,93,255:32,0 chr1 15598880 . T . PASS END=15598881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 15598882 . C . PASS END=15598886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,83,255:27,0 chr1 15598887 . G . PASS END=15598887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 15598888 . G . PASS END=15598890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 15598891 . T . PASS END=15598891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 15598892 . T . PASS END=15598893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 15598894 . A . PASS END=15598894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 15598895 . A . PASS END=15598911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 15598912 . T . PASS END=15598912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,859:0,59,255:28,0 chr1 15598913 . T . PASS END=15598918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 15598919 . A . PASS END=15598919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:27,0 chr1 15598920 . C . PASS END=15598921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 15598922 . A . PASS END=15598922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 15598923 . G . PASS END=15598927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 15598928 . A . PASS END=15598933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,970:0,70,255:26,0 chr1 15598934 . A . PASS END=15598934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 15598935 . A . PASS END=15598942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,802:0,64,255:26,0 chr1 15598943 . C . PASS END=15598946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15598947 . G . PASS END=15598947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 15598948 . A . PASS END=15598948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,939:0,53,255:26,0 chr1 15598949 . A . PASS END=15598950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 15598951 . C . PASS END=15598987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 15598988 . G . PASS END=15598991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 15598992 . G . PASS END=15599008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:15:0,45,543:0,45,255:16,0 chr1 15599009 . T . PASS END=15599009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr1 15599010 . T . PASS END=15599024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 15599025 . G A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=1.473;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,9,0:0.600,0.000:15:3,4,0:3,5,0:48:85,0,49,264,215,479:251,0,188:6,0:5.0000e+01,7.0928e-05,5.1982e+01,2.6427e+02,2.4940e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,3,6:3,3,4,5 chr1 15613642 . A . PASS END=15613642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 15613643 . T C, 47.54 PASS DP=65;MQ=250.00;MQRankSum=6.822;ReadPosRankSum=3.095;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,27,0:0.415,0.000:65:20,14,0:18,13,0:46:82,0,50,957,1359,2317:255,0,255:34,0:4.7536e+01,9.8368e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,18,15,12:18,20,14,13 chr1 15613644 . G . PASS END=15613653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,173,255:40,0 chr1 15615895 . G . PASS END=15615895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr1 15615896 . T . PASS END=15615896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 15615897 . C . PASS END=15615916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 15615917 . G . PASS END=15615921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 15615922 . G . PASS END=15615922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 15615923 . C . PASS END=15615927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 15615928 . T . LowGQ END=15615928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,208:28,0,236:7,0 chr1 15615929 . G . PASS END=15615933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 15615934 . G . PASS END=15615941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 15615942 . G . PASS END=15615942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 15615943 . C . PASS END=15615949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 15615950 . G . PASS END=15615950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 15615951 . T . PASS END=15615960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 15615961 . C . PASS END=15615961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 15615962 . A . PASS END=15615977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 15615978 . C . PASS END=15615978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 15615979 . C . PASS END=15615980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 15615981 . A . PASS END=15615981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 15615982 . C . PASS END=15615982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 15615983 . C . PASS END=15615983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 15615984 . A . PASS END=15615984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 15615985 . T . PASS END=15615985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 15615986 . C . PASS END=15615994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,660:0,44,255:19,0 chr1 15615995 . C . PASS END=15615995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 15615996 . C . PASS END=15616003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,670:0,44,255:19,0 chr1 15616004 . A . PASS END=15616005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15616006 . G . PASS END=15616006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,659:0,16,255:17,0 chr1 15616007 . G . PASS END=15616013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 15616014 . G . PASS END=15616014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 15616015 . C . PASS END=15616023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,759:0,50,255:19,0 chr1 15616024 . A . PASS END=15616028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:24,0 chr1 15616029 . A . PASS END=15616029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 15616030 . A . PASS END=15616032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 15616033 . A . PASS END=15616033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 15616034 . G . PASS END=15616046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 15616047 . C . PASS END=15616048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 15616049 . T . PASS END=15616057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 15616058 . C . PASS END=15616058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 15616059 . C . PASS END=15616062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 15616063 . G . PASS END=15616063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr1 15616064 . T . PASS END=15616071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 15616072 . C . PASS END=15616072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:20,0 chr1 15616073 . C . PASS END=15616079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 15616080 . C . PASS END=15616080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 15616081 . C . PASS END=15616082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15616083 . C . PASS END=15616131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,501:0,40,255:19,0 chr1 15616132 . G . PASS END=15616132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 15616133 . A . PASS END=15616141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 15616142 . A . PASS END=15616154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 15616155 . C . PASS END=15616162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 15623180 . T . PASS END=15623281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1217:0,86,255:40,0 chr1 15623282 . A . PASS END=15623285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 15623286 . C . PASS END=15623289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:23,0 chr1 15627701 . G . PASS END=15627921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:29:0,81,1211:0,86,255:40,0 chr1 15627922 . G . PASS END=15627927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,998:0,68,255:26,0 chr1 15627928 . G . PASS END=15627928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15627929 . A . PASS END=15627931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 15627932 . A . PASS END=15627932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:26,0 chr1 15627933 . G . PASS END=15627937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15635109 . A . PASS END=15635109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 15635110 . T . PASS END=15635138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:24,0 chr1 15635139 . G . PASS END=15635142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 15635143 . T . PASS END=15635143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15635144 . G . PASS END=15635232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1097:0,80,255:36,0 chr1 15639553 . G . PASS END=15639683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:42:0,90,1350:0,94,255:40,0 chr1 15640942 . A . PASS END=15640942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 15640943 . T . PASS END=15640943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 15640944 . G . PASS END=15640944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 15640945 . G . PASS END=15640951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 15640952 . C . PASS END=15640954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15640955 . A . PASS END=15640955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,536:0,46,255:19,0 chr1 15640956 . A . PASS END=15640957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 15640958 . C . PASS END=15640959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 15640960 . G . PASS END=15640966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 15640967 . G . PASS END=15640967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 15640968 . A . PASS END=15640970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:65:23:0,65,953:0,65,255:26,0 chr1 15640971 . T . PASS END=15640974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 15640975 . A . PASS END=15640975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:26,0 chr1 15640976 . G . PASS END=15640976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 15640977 . G . PASS END=15640981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,940:0,84,255:32,0 chr1 15640982 . T . PASS END=15640982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,931:0,79,255:31,0 chr1 15640983 . T . PASS END=15641019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1150:0,80,255:34,0 chr1 15641020 . C . PASS END=15641031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:25,0 chr1 15641032 . C . PASS END=15641046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:29,0 chr1 15641047 . C . PASS END=15641047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 15641048 . C . PASS END=15641055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 15641056 . G . PASS END=15641092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:26,0 chr1 15641093 . A . PASS END=15641094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 15642874 . T . PASS END=15642963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1410:0,90,255:40,0 chr1 15644320 . C . PASS END=15644424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,117,1755:0,140,255:40,0 chr1 15650948 . G . PASS END=15651055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,117,1755:0,153,255:40,0 chr1 15653555 . C . PASS END=15653555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 15653556 . T . PASS END=15653556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:30,0 chr1 15653557 . G . PASS END=15653557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 15653558 . G . PASS END=15653558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:29,0 chr1 15653559 . A . PASS END=15653560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 15653561 . C . PASS END=15653561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 15653562 . A . PASS END=15653605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1109:0,80,255:36,0 chr1 15653606 . C . PASS END=15653606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:30,0 chr1 15653607 . C . PASS END=15653638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:33,0 chr1 15654773 . T . PASS END=15654778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,109,1420:0,109,255:40,0 chr1 15654779 . G . PASS END=15654779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1332:0,73,255:40,0 chr1 15654780 . A . PASS END=15654785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:43:0,90,1491:0,90,255:40,0 chr1 15654786 . T . PASS END=15654786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1621:0,75,255:40,0 chr1 15654787 . T . PASS END=15654795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:48:0,97,1643:0,97,255:40,0 chr1 15654796 . C . PASS END=15654925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:37:0,93,1395:0,110,255:40,0 chr1 15655842 . G . PASS END=15655878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:17,0 chr1 15655879 . A . PASS END=15655879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 15655880 . G . PASS END=15655881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 15655882 . A . PASS END=15655882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 15655883 . G . PASS END=15655886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 15655887 . G . PASS END=15655887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 15655888 . T . PASS END=15655894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 15655895 . T . PASS END=15655895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr1 15655896 . C . PASS END=15655902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 15655903 . A . PASS END=15655904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 15655905 . C . PASS END=15655905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 15655906 . T . PASS END=15655909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:16:0,34,574:0,34,255:13,0 chr1 15655910 . G . PASS END=15655918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 15655919 . A . PASS END=15655919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 15655920 . C . PASS END=15655923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 15655924 . T . PASS END=15655924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:14,0 chr1 15655925 . C . PASS END=15655929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 15655930 . G . PASS END=15655930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 15655931 . G . PASS END=15655943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr1 15655944 . G . PASS END=15655957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:23,0 chr1 15655958 . G . PASS END=15655958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 15655959 . A . PASS END=15655965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 15655966 . C . PASS END=15655994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr1 15655995 . C . PASS END=15656042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:24,0 chr1 15656043 . T . PASS END=15656043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 15656044 . G . PASS END=15656049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 15656050 . T . PASS END=15656050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 15656051 . T . PASS END=15656051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 15656052 . T . PASS END=15656052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 15656053 . T . PASS END=15656067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 15656068 . C . PASS END=15656068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 15656069 . A . PASS END=15656070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 15656071 . G . PASS END=15656072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 15665977 . G . PASS END=15666047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,145,255:40,0 chr1 15668232 . A . PASS END=15668239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 15668240 . C . PASS END=15668248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,833:0,72,255:24,0 chr1 15668249 . T . PASS END=15668250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:25,0 chr1 15668251 . A . PASS END=15668251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 15668252 . G . PASS END=15668253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,969:0,75,255:26,0 chr1 15668254 . A . PASS END=15668262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:29,0 chr1 15668263 . A . PASS END=15668263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 15668264 . G . PASS END=15668264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 15668265 . T . PASS END=15668265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr1 15668266 . C . PASS END=15668277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1160:0,89,255:35,0 chr1 15668278 . A . PASS END=15668278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 15668279 . A . PASS END=15668285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:35,0 chr1 15668286 . C T, 49.72 PASS DP=38;MQ=250.00;MQRankSum=5.248;ReadPosRankSum=2.967;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,18,0:0.474,0.000:38:9,6,0:11,12,0:48:84,0,50,586,678,1264:255,0,255:18,0:4.9724e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,8,10,8:9,11,10,8 chr1 15668287 . G . PASS END=15668323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1325:0,87,255:40,0 chr1 15668324 . G . PASS END=15668377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1211:0,88,255:40,0 chr1 15668378 . G . PASS END=15668389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,67,255:23,0 chr1 15671579 . G . PASS END=15671686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:43:0,118,1659:0,118,255:40,0 chr1 15671912 . G . PASS END=15671924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:40:0,85,1415:0,85,255:40,0 chr1 15671925 . G . PASS END=15671925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1480:0,79,255:39,0 chr1 15671926 . C . PASS END=15672019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:35:0,87,1305:0,97,255:40,0 chr1 15675538 . G . PASS END=15675645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,120,1800:0,123,255:40,0 chr1 15676176 . A . PASS END=15676184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,143,255:40,0 chr1 15679373 . A . PASS END=15679480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:59:0,120,1800:0,153,255:40,1 chr1 15684606 . G . PASS END=15684623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,99,1256:0,102,255:37,0 chr1 15684624 . C . PASS END=15684624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 15684625 . A . PASS END=15684779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:38:0,97,1300:0,97,255:40,0 chr1 15686974 . A . PASS END=15686974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1230:0,111,255:37,0 chr1 15686975 . T . PASS END=15686977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:37,0 chr1 15686978 . T . PASS END=15686978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 15686979 . G . PASS END=15686979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 15686980 . G . PASS END=15686982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1429:0,81,255:37,0 chr1 15686983 . G . PASS END=15686983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr1 15686984 . A . PASS END=15686986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1449:0,82,255:37,0 chr1 15686987 . A . PASS END=15686987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1289:0,73,255:36,0 chr1 15686988 . G . PASS END=15686988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 15686989 . C . PASS END=15686989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1307:0,78,255:37,0 chr1 15686990 . G . PASS END=15686992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1435:0,84,255:40,0 chr1 15686993 . T . PASS END=15686993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1457:0,68,255:39,0 chr1 15686994 . A . PASS END=15687005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1429:0,84,255:40,0 chr1 15687006 . G . PASS END=15687006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1471:0,57,255:38,0 chr1 15687007 . A . PASS END=15687007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1480:0,74,255:38,0 chr1 15687008 . A . PASS END=15687021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:43:0,90,1311:0,90,255:40,0 chr1 15687022 . C . PASS END=15687031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:80:45:0,80,1523:0,80,255:40,0 chr1 15687032 . A . PASS END=15687032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1537:0,58,255:38,0 chr1 15687033 . G . PASS END=15687045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:80:45:0,80,1551:0,80,255:40,0 chr1 15687046 . A . PASS END=15687046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:40,0 chr1 15687047 . G . PASS END=15687058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:94:44:0,94,1427:0,94,255:40,0 chr1 15687059 . A G, 181.51 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,20,0:0,25,0:132:219,135,0,1670,135,1670:255,141,0:0,0:1.8151e+02,1.3151e+02,0.0000e+00,4.5000e+02,1.6628e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,21:0,0,29,16 chr1 15687060 . A . PASS END=15687096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,102,1614:0,102,255:40,0 chr1 15687097 . C . PASS END=15687171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:36:0,92,1230:0,92,255:40,0 chr1 15687172 . A . PASS END=15687172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1345:0,78,255:35,0 chr1 15687173 . T . PASS END=15687174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 15687175 . G . PASS END=15687175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1236:0,62,255:34,0 chr1 15687176 . C . PASS END=15687194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:35,0 chr1 15687195 . C . PASS END=15687199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,74,255:23,0 chr1 15689138 . C . PASS END=15689222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1260:0,86,255:40,0 chr1 15690237 . T . PASS END=15690297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,133,255:40,0 chr1 15692323 . A . PASS END=15692429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:36:0,92,1324:0,92,255:40,0 chr1 15693959 . G . PASS END=15693973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,779:0,75,255:25,0 chr1 15693974 . A . PASS END=15693974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 15693975 . G . PASS END=15693978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 15693979 . A . PASS END=15693981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 15693982 . A . PASS END=15693982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 15693983 . T . PASS END=15694013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1086:0,87,255:37,0 chr1 15694014 . G . PASS END=15694014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:35,0 chr1 15694015 . C . PASS END=15694079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:37:0,82,1319:0,82,255:40,0 chr1 15694080 . G . PASS END=15694092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:36:0,83,1329:0,83,255:35,0 chr1 15694093 . C . PASS END=15694093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr1 15694094 . T . PASS END=15694096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1235:0,88,255:33,0 chr1 15694097 . A . PASS END=15694097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:28,0 chr1 15694098 . G . PASS END=15694101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1227:0,86,255:30,0 chr1 15694102 . C . PASS END=15694102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:29,0 chr1 15694103 . T . PASS END=15694103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 15694104 . T . PASS END=15694104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:29,0 chr1 15694105 . G . PASS END=15694105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:30,0 chr1 15694106 . A . PASS END=15694106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1086:0,38,255:28,0 chr1 15694107 . G . PASS END=15694107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 15694108 . G . PASS END=15694108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:31,0 chr1 15694109 . A . PASS END=15694109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,1028:0,33,255:29,0 chr1 15694110 . G . PASS END=15694110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:33,0 chr1 15694111 . G . PASS END=15694111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:5:33:0,5,934:0,5,255:30,0 chr1 15694112 . C . PASS END=15694112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1073:0,82,255:32,0 chr1 15694113 . A . PASS END=15694114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1013:0,68,255:32,0 chr1 15694115 . T . PASS END=15694115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:3:34:0,3,971:0,3,255:26,0 chr1 15694116 . C . PASS END=15694116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1047:0,52,255:25,0 chr1 15694117 . A . LowGQ END=15694117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,774:14,0,255:21,0 chr1 15694118 . G . PASS END=15694118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 15695866 . G . PASS END=15695878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1194:0,96,255:32,0 chr1 15695879 . A . PASS END=15695879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1045:0,63,255:29,0 chr1 15695880 . A . PASS END=15695967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,91,255:40,0 chr1 15695968 . C . PASS END=15695998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 15700998 . C . PASS END=15701003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 15701004 . T . PASS END=15701006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr1 15701007 . T . PASS END=15701007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 15701008 . T . PASS END=15701010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 15701011 . G . PASS END=15701011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 15701012 . C . PASS END=15701076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:30:0,90,1088:0,90,255:38,0 chr1 15701077 . T . PASS END=15701077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1252:0,70,255:35,0 chr1 15701078 . A . PASS END=15701110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,92,255:37,0 chr1 15701111 . G . PASS END=15701113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 15701114 . G . PASS END=15701118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,88,255:28,0 chr1 15701119 . G . PASS END=15701119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr1 15701120 . C . PASS END=15701127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 15702099 . A . PASS END=15702226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,117,1755:0,135,255:40,0 chr1 15707197 . C . PASS END=15707197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:28,0 chr1 15707198 . C . PASS END=15707219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:31,0 chr1 15707220 . A . PASS END=15707220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 15707221 . A . PASS END=15707264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1219:0,93,255:34,0 chr1 15707265 . T . PASS END=15707292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,840:0,70,255:26,0 chr1 15707727 . T . PASS END=15707728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 15707729 . C . PASS END=15707729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 15707730 . C . PASS END=15707730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 15707731 . T . PASS END=15707731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 15707732 . G . PASS END=15707733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 15707734 . A . PASS END=15707734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 15707735 . T . PASS END=15707751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,629:0,40,255:19,0 chr1 15707752 . G . PASS END=15707754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 15707755 . G . PASS END=15707760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15707761 . T . PASS END=15707761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:18,0 chr1 15707762 . G . PASS END=15707763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 15707764 . A . PASS END=15707765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 15707766 . A . PASS END=15707767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 15707768 . C . PASS END=15707770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 15707771 . G . PASS END=15707774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 15707775 . A . PASS END=15707776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,748:0,55,255:23,0 chr1 15707777 . G . PASS END=15707780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:24,0 chr1 15707781 . G . PASS END=15707786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 15707787 . G . PASS END=15707787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 15707788 . T . PASS END=15707920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,1073:0,80,255:40,0 chr1 15707921 . A . PASS END=15707940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr1 15707941 . A . PASS END=15707945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr1 15707946 . A . PASS END=15707947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 15708524 . G . PASS END=15708526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 15708527 . G . PASS END=15708539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:17,0 chr1 15708540 . A G, 98.17 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,8,0:0,9,0:48:136,51,0,659,51,659:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,5:0,0,11,6 chr1 15708541 . T . PASS END=15708542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,607:0,54,255:18,0 chr1 15708543 . G . PASS END=15708546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 15708547 . T . PASS END=15708547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 15708548 . G . PASS END=15708563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 15708564 . G . PASS END=15708564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 15708565 . C . PASS END=15708577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 15708578 . T . PASS END=15708595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,901:0,72,255:26,0 chr1 15708596 . C . PASS END=15708609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 15708610 . T . PASS END=15708610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 15708611 . G . PASS END=15708612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 15708613 . T . PASS END=15708620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 15708621 . G . PASS END=15708639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1155:0,80,255:28,0 chr1 15708640 . A . PASS END=15708657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 15708658 . A . PASS END=15708658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 15708659 . G . PASS END=15708661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 15708662 . G . PASS END=15708662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 15708663 . A . PASS END=15708678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 15708679 . G . PASS END=15708680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 15708681 . C . PASS END=15708689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:19,0 chr1 15709652 . T . PASS END=15709660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1074:0,93,255:31,0 chr1 15709661 . G . PASS END=15709661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 15709662 . C . PASS END=15709675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:33,0 chr1 15709676 . C . PASS END=15709676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:32,0 chr1 15709677 . T . PASS END=15709693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1310:0,92,255:37,0 chr1 15709757 . G . PASS END=15709780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:40:0,91,1590:0,91,255:40,0 chr1 15710303 . A . PASS END=15710305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 15710306 . A . PASS END=15710310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:31,0 chr1 15710311 . A . PASS END=15710311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 15710312 . C . PASS END=15710373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:32:0,85,1180:0,85,255:40,0 chr1 15710374 . C . PASS END=15710410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:47:0,114,1759:0,114,255:40,0 chr1 15710411 . G C, 194.48 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,21,0:0,28,0:144:232,147,0,1897,147,1897:255,147,0:0,0:1.9448e+02,1.4448e+02,0.0000e+00,4.5000e+02,1.7925e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,29:0,0,30,19 chr1 15710412 . T . PASS END=15710426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:40:0,108,1620:0,118,255:40,0 chr1 15714547 . G . PASS END=15714627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,110,1482:0,110,255:40,0 chr1 15714842 . G C, 89.13 PASS DP=17;MQ=248.17;FractionInformativeReads=0.824 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,14,0:1.000,0.000:14:0,4,0:0,10,0:39:127,42,0,533,42,533:255,9,0:0,0:8.9134e+01,3.9134e+01,5.3044e-04,4.5000e+02,7.3904e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,9:0,0,9,5:15714831 chr1 15714843 . C . PASS END=15714844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 15714845 . C . PASS END=15714847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:32:16:0,32,565:0,32,255:17,0 chr1 15714848 . C . PASS END=15714848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 15714849 . C . PASS END=15714849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 15714850 . C . PASS END=15714851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 15714852 . A . LowGQ END=15714852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:16,0 chr1 15714853 . C . PASS END=15714854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 15714855 . T . PASS END=15714855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,580:0,24,255:17,0 chr1 15714856 . G . PASS END=15714856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 15714857 . C . PASS END=15714859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,582:0,40,255:18,0 chr1 15714860 . G . PASS END=15714860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 15714861 . C . PASS END=15714861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 15714862 . A . PASS END=15714862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 15714863 . G . PASS END=15714863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 15714864 . T . PASS END=15714864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,538:0,21,255:19,0 chr1 15714865 . T . PASS END=15714868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 15714869 . A . PASS END=15714869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 15714870 . C . PASS END=15714872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 15714873 . A . PASS END=15714873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 15714874 . T . PASS END=15714875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 15714876 . A . PASS END=15714876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 15717706 . A . PASS END=15717759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:59:0,120,1800:0,139,255:40,0 chr1 15723793 . G . PASS END=15723909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:39:0,92,1382:0,92,255:40,0 chr1 15736468 . A . PASS END=15736492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 15736493 . A . PASS END=15736514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 15736515 . G . PASS END=15736516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 15736517 . A . PASS END=15736551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,158:0,18,158:6,0 chr1 15736552 . G . LowGQ END=15736556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:0:7:0,0,135:0,0,195:3,0 chr1 15736557 . G . PASS END=15736557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr1 15736558 . A . LowGQ END=15736565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,135:0,0,176:3,0 chr1 15736566 . A AGCGGCG, 50.00 PASS DP=6;MQ=240.01;MQRankSum=0.358;ReadPosRankSum=-0.358;FractionInformativeReads=0.833;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,3,0:0.600,0.000:5:1,2,0:1,1,0:38:71,0,36,98,45,143:98,0,98:2,4:5.0001e+01,6.5652e-04,3.8503e+01,1.1213e+02,7.9301e+01,1.5966e+02:0.00,21.00,24.00,34.77,55.77,37.77:2,0,2,1:1,1,1,2 chr1 15736567 . G . LowGQ END=15736567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,78:59,0,137:5,0 chr1 15736568 . C . PASS END=15736578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr1 15736579 . G . PASS END=15736600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr1 15736601 . C T, 33.75 PASS DP=3;MQ=229.58;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,2,0:0.667,0.000:3:0,1,0:1,1,0:30:69,0,30,72,36,107:69,0,30:1,0:3.3746e+01,4.1414e-03,3.2749e+01,7.1526e+01,7.0539e+01,1.1029e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,1,1:1,0,0,2 chr1 15736602 . C . PASS END=15736610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,108:3,0 chr1 15736611 . G . PASS END=15736614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 15736615 . A . PASS END=15736620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 15736621 . G . PASS END=15736634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 15736635 . C . PASS END=15736638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 15736639 . A . PASS END=15736656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 15736657 . G . PASS END=15736669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr1 15736670 . G . PASS END=15736709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,511:0,42,255:18,0 chr1 15736710 . C . PASS END=15736718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 15736719 . C . PASS END=15736732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:18:0,54,676:0,54,255:18,0 chr1 15736733 . T . PASS END=15736733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 15736734 . C . PASS END=15736771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,553:0,48,255:18,0 chr1 15736772 . A . PASS END=15736775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 15752367 . G . PASS END=15752374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 15752375 . C . PASS END=15752375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:23,0 chr1 15752376 . C . PASS END=15752377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 15752378 . G . PASS END=15752379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 15752380 . C . PASS END=15752381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 15752382 . G . PASS END=15752402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1133:0,82,255:34,0 chr1 15752403 . G . PASS END=15752403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:32,0 chr1 15752404 . G . PASS END=15752408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1357:0,108,255:37,0 chr1 15752409 . A . PASS END=15752409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:36,0 chr1 15752410 . A . PASS END=15752470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1017:0,80,255:37,0 chr1 15752471 . A . PASS END=15752471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:27,0 chr1 15752472 . G . PASS END=15752472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:28,0 chr1 15752473 . G . PASS END=15752476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 15752477 . T . PASS END=15752509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,898:0,62,255:26,0 chr1 15752510 . G . PASS END=15752514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 15753646 . T . PASS END=15753656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 15753657 . C . PASS END=15753660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 15753661 . C . PASS END=15753661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 15753662 . G . PASS END=15753683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 15753684 . T . PASS END=15753684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 15753685 . C . PASS END=15753695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 15753696 . C . PASS END=15753696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:14,0 chr1 15753697 . G . PASS END=15753709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 15753710 . T . PASS END=15753710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 15753711 . G . PASS END=15753726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 15753727 . A . PASS END=15753727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 15753728 . T . PASS END=15753780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:18,0 chr1 15754394 . T . PASS END=15754446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:18,0 chr1 15754447 . G . PASS END=15754464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,612:0,48,255:17,0 chr1 15754465 . C . PASS END=15754471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 15754472 . A . PASS END=15754475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:14:0,24,360:0,42,255:8,0 chr1 15754476 . C . PASS END=15754476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:8,0 chr1 15754477 . C . PASS END=15754483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 15754484 . T C, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,5,0:0,7,0:33:121,36,0,462,36,462:255,39,0:0,0:8.3118e+01,3.3118e+01,2.1195e-03,4.5000e+02,6.7888e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,7:0,0,6,6 chr1 15754485 . T . PASS END=15754505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 15755089 . G . PASS END=15755092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr1 15755093 . A . PASS END=15755094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 15755095 . G . PASS END=15755098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:29,0 chr1 15755099 . T . PASS END=15755099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr1 15755100 . C . PASS END=15755101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr1 15755102 . A . PASS END=15755102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,949:0,76,255:30,0 chr1 15755103 . C . PASS END=15755123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1127:0,93,255:33,0 chr1 15755124 . G C, 48.35 PASS DP=33;MQ=250.00;MQRankSum=4.826;ReadPosRankSum=1.548;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,14,0:0.424,0.000:33:9,8,0:10,6,0:47:83,0,50,501,670,1171:255,0,255:19,0:4.8348e+01,8.5166e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,5,9:11,8,5,9 chr1 15755125 . G . PASS END=15755125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 15755126 . A . PASS END=15755126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:30,0 chr1 15755127 . G . PASS END=15755161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1150:0,85,255:34,0 chr1 15755162 . C . PASS END=15755171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:32,0 chr1 15755172 . G . PASS END=15755177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 15755178 . G . PASS END=15755181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 15755182 . A . PASS END=15755193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:26,0 chr1 15755194 . A . PASS END=15755211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:18:0,45,675:0,54,255:19,0 chr1 15755212 . T . PASS END=15755212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:23:19:0,23,476:0,23,255:14,0 chr1 15755213 . T . PASS END=15755218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 15755219 . A . PASS END=15755219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 15755220 . G . PASS END=15755220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 15764961 . A . PASS END=15764991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1074:0,93,255:33,0 chr1 15764992 . T . PASS END=15764992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:27,0 chr1 15764993 . G . PASS END=15765000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1109:0,80,255:28,0 chr1 15765004 . A . PASS END=15765004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 15766791 . C . PASS END=15766791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 15766796 . C . PASS END=15766797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 15766798 . T . PASS END=15766798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 15766799 . C . PASS END=15766800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 15766801 . A . PASS END=15766802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 15766803 . C . PASS END=15766803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 15766804 . T . PASS END=15766804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 15766805 . G . PASS END=15766808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 15766809 . G . PASS END=15766809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 15766810 . G . PASS END=15766812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 15766813 . C . PASS END=15766813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 15766814 . C . PASS END=15766815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 15766816 . A . PASS END=15766817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 15766818 . C . PASS END=15766820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 15766821 . C . PASS END=15766821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 15766822 . C . PASS END=15766827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 15766828 . A . PASS END=15766828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 15766829 . A . PASS END=15766829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 15766830 . C . PASS END=15766830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 15766831 . C . PASS END=15766831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 15766832 . T . PASS END=15766832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 15766833 . A . PASS END=15766833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 15766834 . T . PASS END=15766835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 15766836 . C . PASS END=15766836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 15766837 . G . PASS END=15766881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:16:0,48,604:0,48,255:20,0 chr1 15766882 . T . PASS END=15766882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 15766883 . G . PASS END=15766886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,604:0,48,255:16,0 chr1 15766887 . G . PASS END=15766887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 15766988 . G . PASS END=15766989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1100:0,87,255:29,0 chr1 15766990 . T . PASS END=15766990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 15766991 . C . PASS END=15766998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 15766999 . A . PASS END=15767035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1135:0,83,255:34,0 chr1 15767036 . C A, 48.19 PASS DP=34;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=4.881;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,14,0:0.412,0.000:34:9,6,0:11,8,0:46:83,0,47,183,183,183:255,0,255:19,0:4.8188e+01,1.0924e-04,5.0000e+01,1.8296e+02,2.1773e+02,1.8597e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,6,8,6:9,11,10,4 chr1 15767037 . G . PASS END=15767056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1111:0,82,255:33,0 chr1 15767057 . C . PASS END=15767073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:28:0,60,900:0,67,255:27,0 chr1 15767074 . C . PASS END=15767086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,869:0,69,255:23,0 chr1 15767093 . G . PASS END=15767093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 15768941 . A . PASS END=15768941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 15768943 . C . PASS END=15769068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:35:0,88,1299:0,88,255:40,0 chr1 15769914 . C . PASS END=15769919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1612:0,116,255:40,0 chr1 15769920 . T . PASS END=15770045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:36:0,81,1215:0,101,255:40,0 chr1 15770046 . C . PASS END=15770050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:25,0 chr1 15770053 . G . PASS END=15770053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 15771100 . G . PASS END=15771101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,682:0,44,255:19,0 chr1 15771102 . C . PASS END=15771106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,610:0,60,255:20,1 chr1 15771107 . G . PASS END=15771107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 15771108 . C . PASS END=15771132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:25,0 chr1 15771133 . G . PASS END=15771138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 15771139 . C . PASS END=15771144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 15771145 . G . PASS END=15771225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1188:0,87,255:35,0 chr1 15771226 . G . PASS END=15771240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 15771241 . T . PASS END=15771241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,853:0,26,255:24,0 chr1 15771242 . G . PASS END=15771246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:25,0 chr1 15772080 . G . PASS END=15772080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 15772092 . G . PASS END=15772094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:29,0 chr1 15772095 . G . PASS END=15772204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:30:0,85,1139:0,85,255:37,0 chr1 15772205 . C . PASS END=15772231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 15772232 . C . PASS END=15772238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:19,0 chr1 15772239 . A . PASS END=15772239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr1 15772240 . A . PASS END=15772244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:15,0 chr1 15772256 . C . PASS END=15772256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 15773070 . A . PASS END=15773071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15773072 . A . PASS END=15773072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:25,0 chr1 15773073 . A . PASS END=15773077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 15773078 . G . PASS END=15773129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1086:0,80,255:38,0 chr1 15773130 . A . PASS END=15773130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:28:39:0,28,1095:0,28,255:33,0 chr1 15773131 . C . PASS END=15773131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1304:0,84,255:35,0 chr1 15773132 . T . PASS END=15773132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1346:0,68,255:35,0 chr1 15773133 . T . PASS END=15773138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1260:0,84,255:37,0 chr1 15773139 . T . PASS END=15773139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1308:0,45,255:34,0 chr1 15773140 . C . PASS END=15773159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1218:0,81,255:36,0 chr1 15773160 . T . PASS END=15773160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1144:0,53,255:30,0 chr1 15773161 . G . PASS END=15773169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:31,0 chr1 15773170 . A . PASS END=15773170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 15773171 . G . PASS END=15773180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 15773181 . C . PASS END=15773181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1008:0,46,255:26,0 chr1 15773182 . T . PASS END=15773191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 15773192 . T . PASS END=15773202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,77,255:26,0 chr1 15773203 . C . PASS END=15773208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15773209 . C . PASS END=15773221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,65,255:25,0 chr1 15773222 . C . PASS END=15773222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:19,0 chr1 15773223 . C . PASS END=15773223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15773224 . A . PASS END=15773245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:17:0,47,659:0,47,255:19,0 chr1 15773246 . G . PASS END=15773246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 15773247 . T . PASS END=15773247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 15773248 . T . PASS END=15773252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 15773253 . C . PASS END=15773253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:11,0 chr1 15773254 . C . PASS END=15773256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 15773257 . C . PASS END=15773266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,25,255:9,0 chr1 15783249 . A . PASS END=15783288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:42:0,90,1537:0,90,255:40,0 chr1 15783581 . C . PASS END=15783596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,125,255:40,0 chr1 15783597 . C . PASS END=15783669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,120,255:40,0 chr1 15788056 . G . PASS END=15788153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1158:0,85,255:40,0 chr1 15789228 . C . PASS END=15789259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1124:0,87,255:40,0 chr1 15789260 . G . PASS END=15789296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,138,255:40,0 chr1 15789297 . A C, 50.00 PASS DP=49;MQ=196.42;MQRankSum=-3.550;ReadPosRankSum=5.015;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,25,0:0.521,0.000:48:16,12,0:7,13,0:48:85,0,50,857,823,1680:255,0,255:23,0:5.0000e+01,6.5751e-05,5.2878e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,8,17,8:8,15,12,13 chr1 15789298 . G . PASS END=15789334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,112,1681:0,112,255:40,0 chr1 15789335 . A . PASS END=15789356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1303:0,87,255:39,0 chr1 15789881 . G . PASS END=15789886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 15789887 . C . PASS END=15789889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15789890 . T . PASS END=15789890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 15789891 . G . PASS END=15789893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 15789894 . C . PASS END=15789894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 15789895 . T . PASS END=15789900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:24,0 chr1 15789901 . A . PASS END=15789902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,649:0,55,255:23,0 chr1 15789903 . C . PASS END=15789913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,856:0,62,255:26,0 chr1 15789914 . C . PASS END=15789920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr1 15789921 . C . PASS END=15789946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,64,255:26,0 chr1 15789947 . C . PASS END=15789947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 15789948 . C . PASS END=15789952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,894:0,62,255:26,0 chr1 15789953 . T . PASS END=15789953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 15789954 . C . PASS END=15789978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,840:0,61,255:26,0 chr1 15789979 . A . PASS END=15789979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,701:0,24,255:20,0 chr1 15789980 . C . PASS END=15789980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 15789981 . T . PASS END=15789981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:20,0 chr1 15789982 . A . PASS END=15789985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 15789986 . C . PASS END=15789991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 15789992 . C . PASS END=15789992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:17,0 chr1 15789993 . G . PASS END=15790006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 15790007 . A . PASS END=15790013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,557:0,32,255:13,0 chr1 15790014 . C . PASS END=15790014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 15790015 . A . PASS END=15790015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 15790016 . G . PASS END=15790017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 15792494 . C . PASS END=15792509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,684:0,57,255:19,0 chr1 15792510 . T . PASS END=15792531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:22,0 chr1 15792532 . T . PASS END=15792532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 15792533 . T . PASS END=15792551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 15792552 . C . PASS END=15792554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 15792555 . C . PASS END=15792555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 15792556 . T . PASS END=15792559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15792560 . C . PASS END=15792560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 15792561 . C . PASS END=15792568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 15792569 . C . PASS END=15792569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr1 15792570 . C . PASS END=15792573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 15792574 . T . PASS END=15792575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15792576 . G . PASS END=15792581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15792582 . C . PASS END=15792607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 15792608 . C . PASS END=15792622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr1 15792623 . T . PASS END=15792640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,459:0,39,255:13,0 chr1 15793881 . G . PASS END=15793882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 15793883 . A . PASS END=15793883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 15793884 . G . PASS END=15793894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 15793895 . G . PASS END=15793895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 15793896 . C . PASS END=15793907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr1 15793908 . C . PASS END=15793908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 15793909 . A . PASS END=15793912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 15793913 . G A, 49.92 PASS DP=25;MQ=248.73;MQRankSum=3.508;ReadPosRankSum=3.508;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:7,11,0:6,1,0:48:85,0,50,429,465,894:255,0,255:13,0:4.9916e+01,6.6010e-05,5.3000e+01,4.2929e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,7,5:9,4,6,6 chr1 15793914 . T . PASS END=15793923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 15793924 . G . PASS END=15793950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:32,0 chr1 15793951 . T . PASS END=15793989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1194:0,83,255:32,0 chr1 15793990 . C . PASS END=15794000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:24,0 chr1 15794001 . C . PASS END=15794033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,621:0,51,255:19,0 chr1 15798485 . G . PASS END=15798502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,158,255:40,0 chr1 15802621 . A . PASS END=15802660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,132,255:40,0 chr1 15802952 . C . PASS END=15803040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:35:0,98,1335:0,98,255:40,0 chr1 15807593 . G . PASS END=15807690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:37:0,90,1374:0,90,255:40,0 chr1 15808140 . A . PASS END=15808143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 15808144 . A . PASS END=15808160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:32,0 chr1 15808161 . G . PASS END=15808197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:33:0,90,1350:0,99,255:40,0 chr1 15808198 . C T, 178.96 PASS DP=44;MQ=140.45;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,22,0:0,22,0:129:217,132,0,1669,132,1669:255,132,0:0,0:1.7896e+02,1.2896e+02,0.0000e+00,4.5000e+02,1.6373e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,22:0,0,30,14 chr1 15808199 . G . PASS END=15808235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:36:0,92,1318:0,92,255:40,0 chr1 15808236 . T . PASS END=15808244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1280:0,95,255:37,0 chr1 15808760 . C . PASS END=15808760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15808761 . T . PASS END=15808761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 15808762 . C . PASS END=15808766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 15808767 . G A,C, 126.87 PASS DP=29;MQ=187.25;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,2,0:0.931,0.069,0.000:29:0,10,2,0:0,17,0,0:77:165,80,0,929,66,151,943,80,929,943:255,87,0:0,0:1.2687e+02,7.6875e+01,0.0000e+00,4.5000e+02,9.7750e+01,1.5075e+02,4.5000e+02,1.1164e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,18,11:0,0,11,18 chr1 15808768 . G . PASS END=15808804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:30:0,89,1066:0,89,255:40,0 chr1 15808805 . C . PASS END=15808834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:43:0,90,1545:0,90,255:40,0 chr1 15808835 . T . PASS END=15808871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:38:0,95,1464:0,95,255:40,0 chr1 15808872 . G A, 160.85 PASS DP=38;MQ=163.57;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,20,0:0,18,0:111:199,114,0,299,299,299:255,114,0:0,0:1.6085e+02,1.1090e+02,0.0000e+00,2.9562e+02,3.3039e+02,2.9863e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,28:0,0,20,18 chr1 15808873 . A . PASS END=15808888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1240:0,81,255:37,0 chr1 15809759 . G . PASS END=15809838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,108,1498:0,108,255:40,0 chr1 15809839 . G . PASS END=15809864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:39:0,96,1440:0,105,255:40,0 chr1 15809865 . T . PASS END=15809865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:33,0 chr1 15809866 . G . PASS END=15809875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:35,0 chr1 15809876 . G A, 151.88 PASS DP=36;MQ=93.53;FractionInformativeReads=0.972 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,14,0:0,21,0:102:190,105,0,1320,105,1320:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,27:0,0,19,16 chr1 15809877 . G . PASS END=15809891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1156:0,83,255:30,0 chr1 15809892 . C . PASS END=15809895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:24,0 chr1 15812396 . C . PASS END=15812406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,470:0,42,255:16,0 chr1 15812407 . C . PASS END=15812431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,775:0,60,255:25,0 chr1 15812432 . A G, 122.24 PASS DP=25;MQ=207.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,12,0:0,13,0:72:160,75,0,961,75,961:255,75,0:0,0:1.2224e+02,7.2240e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,11:0,0,13,12 chr1 15812433 . G . PASS END=15812439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 15812440 . G . PASS END=15812469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1172:0,83,255:33,0 chr1 15812470 . G . PASS END=15812490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1086:0,80,255:32,0 chr1 15812491 . A . PASS END=15812492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 15812493 . G . PASS END=15812493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 15812494 . A . PASS END=15812494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 15812495 . C . PASS END=15812499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 15812500 . A . PASS END=15812500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 15812501 . T . PASS END=15812502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 15812503 . A . PASS END=15812523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,884:0,71,255:26,0 chr1 15812524 . G . PASS END=15812541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:14:0,42,543:0,42,255:19,0 chr1 15813780 . G . PASS END=15813784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,638:0,41,255:19,0 chr1 15813785 . C . PASS END=15813788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 15813789 . G . PASS END=15813807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:24,0 chr1 15813808 . A . PASS END=15813808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 15813809 . G . PASS END=15813819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:26,0 chr1 15813820 . G . PASS END=15813820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 15813821 . C . PASS END=15813821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 15813822 . C . PASS END=15813824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:29,0 chr1 15813825 . T . PASS END=15813825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 15813826 . G . PASS END=15813892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1108:0,83,255:36,0 chr1 15813893 . C . PASS END=15813903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,68,255:26,0 chr1 15813904 . T . PASS END=15813904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,64,255:18,0 chr1 15813905 . C . PASS END=15813907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr1 15813908 . C . PASS END=15813908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 15813909 . A . PASS END=15813909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 15813910 . A . PASS END=15813910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:21,0 chr1 15813911 . C . PASS END=15813913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 15813914 . C . PASS END=15813924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,729:0,49,255:19,0 chr1 15813925 . T . PASS END=15813931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 15813932 . G . PASS END=15813932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 15817790 . G . PASS END=15817807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,145,255:40,0 chr1 15819438 . T . PASS END=15819530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:54:0,107,1800:0,107,255:40,0 chr1 15820279 . T . PASS END=15820321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 15820322 . C . PASS END=15820363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 15820364 . T . PASS END=15820364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 15820365 . T . PASS END=15820463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,540:0,42,255:19,0 chr1 15820464 . A . PASS END=15820496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 15821768 . C . PASS END=15821778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:19,0 chr1 15821779 . G . PASS END=15821801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 15821802 . G . PASS END=15821802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr1 15821803 . G . PASS END=15821841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,676:0,69,255:24,0 chr1 15821842 . G . PASS END=15821869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 15821870 . C . PASS END=15821870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 15821871 . A . PASS END=15821885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,713:0,47,255:19,0 chr1 15821886 . A . PASS END=15821886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:15,0 chr1 15821887 . C . PASS END=15821891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:16,0 chr1 15821892 . A . PASS END=15821894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 15821895 . G . PASS END=15821911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 15821912 . A . PASS END=15821912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 15821913 . A . PASS END=15821922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 15821923 . A . PASS END=15821924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 15821925 . C . PASS END=15821931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 15821932 . C . PASS END=15821947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,459:0,39,255:13,0 chr1 15831106 . C . PASS END=15831215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:33:0,84,1238:0,94,255:40,0 chr1 15831216 . G . PASS END=15831242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:24,0 chr1 15831243 . A . PASS END=15831243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 15831244 . G . PASS END=15831245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 15831246 . T . PASS END=15831246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 15831247 . G . PASS END=15831253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 15832485 . C . PASS END=15832505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:33:0,88,1187:0,88,255:35,0 chr1 15832506 . G . PASS END=15832542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1266:0,81,255:37,0 chr1 15832543 . T C, 155.34 PASS DP=36;MQ=248.61;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,15,0:0,21,0:105:193,108,0,293,293,293:255,108,0:0,0:1.5534e+02,1.0534e+02,0.0000e+00,2.9011e+02,3.2488e+02,2.9312e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,19:0,0,18,18 chr1 15832544 . G . PASS END=15832551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr1 15832552 . T . PASS END=15832552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:29,0 chr1 15832553 . C . PASS END=15832558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 15832559 . A . PASS END=15832559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 15832560 . A . PASS END=15832574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:31,0 chr1 15833394 . C . PASS END=15833396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 15833397 . G . PASS END=15833397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 15833398 . G . PASS END=15833404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:29,0 chr1 15833405 . G . PASS END=15833405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 15833406 . G . PASS END=15833430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1105:0,86,255:34,0 chr1 15833431 . T . PASS END=15833432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1111:0,72,255:34,0 chr1 15833433 . C . PASS END=15833528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:35:0,96,1352:0,103,255:40,0 chr1 15833529 . A . PASS END=15833529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1444:0,77,255:40,0 chr1 15833530 . A . PASS END=15833535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 15833536 . C . PASS END=15833536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1482:0,77,255:39,0 chr1 15833537 . A . PASS END=15833570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,114,1710:0,126,255:40,0 chr1 15833617 . C . PASS END=15833628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1305:0,117,255:37,0 chr1 15834368 . C . PASS END=15834402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:39:0,93,1383:0,101,255:40,0 chr1 15844605 . C . PASS END=15844614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 15844615 . A G, 98.17 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,11,0:0,6,0:48:136,51,0,659,51,659:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,6:0,0,9,8 chr1 15844616 . A . PASS END=15844618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 15844619 . C . PASS END=15844619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 15844620 . C . PASS END=15844624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 15844625 . G . PASS END=15844625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15844626 . A . PASS END=15844632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,743:0,50,255:19,0 chr1 15844633 . G . PASS END=15844640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:24,0 chr1 15844641 . G . PASS END=15844652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr1 15844653 . C . PASS END=15844653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 15844654 . C . PASS END=15844654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 15844655 . G . PASS END=15844662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 15844663 . A . PASS END=15844663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,892:0,79,255:29,0 chr1 15844664 . A . PASS END=15844668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:30,0 chr1 15844669 . T . PASS END=15844669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 15844670 . G . PASS END=15844671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 15844672 . T . PASS END=15844672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,989:0,79,255:28,0 chr1 15844673 . T . PASS END=15844678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 15844679 . A . PASS END=15844679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,915:0,54,255:26,0 chr1 15844680 . T . PASS END=15844695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1188:0,85,255:34,0 chr1 15844696 . C . PASS END=15844696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr1 15844697 . A . PASS END=15844751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1131:0,80,255:34,0 chr1 15844752 . T . PASS END=15844752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,864:0,43,255:27,0 chr1 15844753 . T . PASS END=15844765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr1 15844766 . G . PASS END=15844768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1147:0,77,255:26,0 chr1 15844769 . A . PASS END=15844771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 15844772 . A . PASS END=15844775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 15844776 . C . PASS END=15844776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 15844777 . C . PASS END=15844804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,798:0,63,255:24,0 chr1 15844805 . A . PASS END=15844805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 15844806 . A . PASS END=15844814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 15844815 . G . PASS END=15844816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 15844817 . G . PASS END=15844819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 15844820 . T . PASS END=15844842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:18,0 chr1 15844843 . T . PASS END=15844843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 15844844 . A . PASS END=15844856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 15844857 . T . PASS END=15844873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 15844874 . G . PASS END=15844880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:7,0 chr1 15844881 . A . PASS END=15844888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:7:0,15,225:0,21,255:6,0 chr1 15844889 . C . PASS END=15844890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 15850564 . C . PASS END=15850568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,613:0,40,255:18,0 chr1 15850569 . T . PASS END=15850569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:16,0 chr1 15850570 . G . PASS END=15850571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,737:0,57,255:19,0 chr1 15850572 . C . PASS END=15850584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,670:0,60,255:22,0 chr1 15850585 . G . PASS END=15850585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 15850586 . G . PASS END=15850589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr1 15850590 . T . PASS END=15850590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 15850591 . G . PASS END=15850591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 15850592 . A . PASS END=15850594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,835:0,42,255:23,0 chr1 15850595 . A . PASS END=15850605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 15850606 . C . PASS END=15850606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15850607 . A . PASS END=15850612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 15850613 . G A, 125.25 PASS DP=26;MQ=247.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,14,0:0,12,0:75:163,78,0,1008,78,1008:255,81,0:0,0:1.2525e+02,7.5253e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,13:0,0,11,15 chr1 15850614 . C . PASS END=15850616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1023:0,71,255:26,0 chr1 15850617 . C . PASS END=15850621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 15850622 . A . PASS END=15850622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:26,0 chr1 15850623 . G . PASS END=15850625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 15850626 . G . PASS END=15850626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 15850627 . G . PASS END=15850630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 15850631 . A . PASS END=15850639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 15850640 . T . PASS END=15850640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,875:0,48,255:25,0 chr1 15850641 . C . PASS END=15850650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1061:0,71,255:25,0 chr1 15850651 . C . PASS END=15850654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 15850655 . A . PASS END=15850655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 15850656 . G . PASS END=15850656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 15850657 . C . PASS END=15850661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:24,0 chr1 15850662 . A . PASS END=15850662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 15850663 . C . PASS END=15850686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:23,0 chr1 15850687 . T . PASS END=15850695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 15855601 . A . PASS END=15855749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:34:0,86,1209:0,86,255:40,0 chr1 15855750 . G . PASS END=15855750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:30,0 chr1 15855751 . A . PASS END=15855752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1095:0,82,255:32,0 chr1 15855753 . G . PASS END=15855753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:30,0 chr1 15855754 . C . PASS END=15855763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1224:0,83,255:32,0 chr1 15855764 . A . PASS END=15855765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 15855766 . T . PASS END=15855767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 15860732 . G . PASS END=15860798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,149,255:40,0 chr1 15862970 . A . PASS END=15862970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 15862971 . T . PASS END=15862971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 15862972 . T . PASS END=15862984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 15862985 . G . PASS END=15862985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 15862986 . A . PASS END=15862986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 15862987 . A . PASS END=15863006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:15:0,44,542:0,44,255:21,0 chr1 15863007 . A . PASS END=15863007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 15863008 . A . PASS END=15863011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 15863012 . G . PASS END=15863013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 15863014 . A . PASS END=15863014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 15863015 . G . PASS END=15863015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 15863016 . A . PASS END=15863016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 15863017 . C . PASS END=15863017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 15863018 . G . PASS END=15863020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 15863021 . G . PASS END=15863021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 15863022 . G . PASS END=15863023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 15863024 . G . PASS END=15863024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 15863025 . A . PASS END=15863203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:30:0,83,1018:0,83,255:40,0 chr1 15863204 . A . PASS END=15863204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 15863205 . G . PASS END=15863205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 15863206 . C . PASS END=15863215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1039:0,71,255:27,0 chr1 15863216 . C . PASS END=15863221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 15863222 . C . PASS END=15863222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 15863223 . T . PASS END=15863225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 15863226 . T . PASS END=15863226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 15863227 . C . PASS END=15863227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 15863228 . A . PASS END=15863231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1031:0,74,255:26,0 chr1 15863232 . T . PASS END=15863232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 15863233 . C . PASS END=15863233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 15863234 . A . PASS END=15863234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 15863235 . C . PASS END=15863264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,65,255:26,0 chr1 15863265 . T . PASS END=15863265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 15863266 . C . PASS END=15863266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 15863267 . G . PASS END=15863267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:19,0 chr1 15863268 . A . PASS END=15863277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:20,0 chr1 15863278 . G . PASS END=15863284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 15863285 . G . PASS END=15863285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 15863286 . T . PASS END=15863286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 15863287 . C . PASS END=15863287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 15863288 . A . PASS END=15863292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 15863293 . A . PASS END=15863293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr1 15863294 . G . PASS END=15863295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 15863296 . A . PASS END=15863297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 15863298 . T . PASS END=15863298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 15863299 . G . PASS END=15863300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 15863301 . A . PASS END=15863309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,774:0,53,255:19,0 chr1 15870894 . G . PASS END=15870899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:13,0 chr1 15870900 . G . PASS END=15870900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 15870901 . A . PASS END=15870901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 15870902 . A . PASS END=15870907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 15870908 . G . PASS END=15870910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 15870911 . G . PASS END=15870919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,651:0,51,255:17,0 chr1 15870920 . G . PASS END=15870931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,845:0,66,255:25,0 chr1 15870932 . C . PASS END=15871078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:84:29:0,84,1086:0,85,255:40,0 chr1 15873262 . G . PASS END=15873348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,148,255:40,0 chr1 15873349 . G . PASS END=15873364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:47:0,81,1215:0,141,255:40,0 chr1 15873365 . A . PASS END=15873366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:72:41:0,72,1080:0,123,255:25,0 chr1 15874765 . T . PASS END=15874794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1204:0,100,255:40,0 chr1 15874795 . T . PASS END=15874795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1277:0,54,255:33,0 chr1 15874796 . C . PASS END=15874919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:31:0,81,1215:0,86,255:40,0 chr1 15874920 . C . PASS END=15874923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:26,0 chr1 15886021 . G . PASS END=15886023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:29,0 chr1 15886024 . C . PASS END=15886024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 15886025 . G . PASS END=15886025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 15886026 . A . PASS END=15886026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 15886027 . G . PASS END=15886034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1241:0,89,255:34,0 chr1 15886035 . G . PASS END=15886035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:24:35:0,24,1008:0,24,255:29,0 chr1 15886036 . A . PASS END=15886037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 15886038 . G . PASS END=15886038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1019:0,55,255:30,0 chr1 15886039 . C . PASS END=15886041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 15886042 . A . PASS END=15886043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:32,0 chr1 15886044 . C . PASS END=15886120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:35:0,87,1269:0,94,255:40,0 chr1 15886121 . G . PASS END=15886145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 15886146 . G . PASS END=15886146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 15886147 . A . PASS END=15886148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 15886149 . G . PASS END=15886151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 15888637 . G . PASS END=15888637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 15888638 . T . PASS END=15888638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 15888639 . A . PASS END=15888646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:24,0 chr1 15888647 . G . PASS END=15888655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr1 15888656 . A . PASS END=15888656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 15888657 . C . PASS END=15888669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1062:0,90,255:31,0 chr1 15888670 . C . PASS END=15888670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:28,0 chr1 15888671 . A . PASS END=15888782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1141:0,82,255:40,0 chr1 15888783 . T . PASS END=15888817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 15888818 . G . PASS END=15888820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 15890424 . G . PASS END=15890427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:18,0 chr1 15890428 . C . PASS END=15890434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,832:0,66,255:24,0 chr1 15890435 . A . PASS END=15890435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 15890436 . G . PASS END=15890445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:25,0 chr1 15890446 . A . PASS END=15890450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15890451 . G . PASS END=15890451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 15890452 . C . PASS END=15890456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 15890457 . A . PASS END=15890457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 15890458 . G . PASS END=15890588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1194:0,83,255:40,0 chr1 15890589 . A . PASS END=15890589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 15890590 . C . PASS END=15890592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 15890593 . A . PASS END=15890606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,70,255:26,0 chr1 15890778 . G . PASS END=15890854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:38:0,87,1418:0,87,255:40,0 chr1 15892414 . G . PASS END=15892414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 15892415 . A . PASS END=15892415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 15892416 . G . PASS END=15892429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,787:0,61,255:26,0 chr1 15892430 . C . PASS END=15892434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 15892435 . G . PASS END=15892436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15892437 . C . PASS END=15892494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:29:0,82,1127:0,82,255:34,0 chr1 15892577 . C . PASS END=15892685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:44:0,117,1755:0,127,255:40,0 chr1 15893594 . C . PASS END=15893764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:97:37:0,97,1303:0,97,255:40,0 chr1 15894273 . G . PASS END=15894628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:30:0,81,1215:0,84,255:40,0 chr1 15894629 . C . PASS END=15894630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1084:0,74,255:26,0 chr1 15894631 . T . PASS END=15894631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 15894632 . T . PASS END=15894632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 15894633 . A . PASS END=15894634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 15894635 . A . PASS END=15894649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,74,255:26,0 chr1 15894650 . C . PASS END=15894650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 15894651 . A . PASS END=15894653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 15894654 . A . PASS END=15894672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:14:0,42,458:0,42,255:19,0 chr1 15900146 . T . PASS END=15900219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,115,1513:0,115,255:40,0 chr1 15901252 . C . PASS END=15901336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,105,1566:0,108,255:40,0 chr1 15904180 . C . PASS END=15904180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:21,0 chr1 15904181 . T . PASS END=15904186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 15904187 . G . PASS END=15904190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 15904191 . T . PASS END=15904199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr1 15904200 . C . PASS END=15904339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1215:0,84,255:40,0 chr1 15904340 . G . PASS END=15904357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr1 15904358 . C . PASS END=15904359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:17,0 chr1 15905354 . C . PASS END=15905355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15905356 . G . PASS END=15905510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:31:0,90,1350:0,93,255:40,0 chr1 15905511 . G . PASS END=15905511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:31,0 chr1 15905512 . T . PASS END=15905539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,83,255:33,0 chr1 15905540 . T . PASS END=15905549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:28:0,69,1035:0,84,255:26,0 chr1 15906589 . T . PASS END=15906637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,139,255:40,0 chr1 15909688 . C . PASS END=15909714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,762:0,63,255:26,0 chr1 15909715 . C . PASS END=15909715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr1 15909716 . T . PASS END=15909734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1058:0,87,255:31,0 chr1 15909735 . T . PASS END=15909735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 15909736 . C . PASS END=15909767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1135:0,80,255:32,0 chr1 15909768 . T . PASS END=15909768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 15909769 . A . PASS END=15909773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 15909774 . T . PASS END=15909774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 15909775 . T . PASS END=15909775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 15909776 . G . PASS END=15909808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr1 15909809 . G . PASS END=15909812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 15909813 . T . PASS END=15909818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 15909819 . G . PASS END=15909824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 15909825 . G . PASS END=15909835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,848:0,64,255:26,0 chr1 15909836 . A . PASS END=15909836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 15909837 . G . PASS END=15909837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 15909838 . G . PASS END=15909849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:20:0,51,765:0,60,255:19,0 chr1 15909850 . C G, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,10,0:0,10,0:57:145,60,0,776,60,776:255,60,0:0,0:1.0719e+02,5.7194e+01,8.2835e-06,4.5000e+02,9.1964e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,13:0,0,7,13 chr1 15909851 . A . PASS END=15909890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:18,0 chr1 15911191 . C . PASS END=15911198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 15911199 . A . PASS END=15911199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 15911200 . G . PASS END=15911264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,235:0,21,235:9,0 chr1 15911265 . G . PASS END=15911280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 15911281 . C . PASS END=15911291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 15911292 . G . PASS END=15911295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:9:0,18,270:0,27,255:6,0 chr1 15911296 . A . PASS END=15911311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:8,0 chr1 15911312 . C . PASS END=15911318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 15911319 . C . PASS END=15911319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 15911320 . T . PASS END=15911322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 15911323 . G . PASS END=15911323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 15911324 . G . PASS END=15911330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 15911331 . G . PASS END=15911331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 15911332 . G . PASS END=15911337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 15911338 . T . PASS END=15911338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 15911339 . T . PASS END=15911339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 15911340 . C . PASS END=15911346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 15911347 . G . LowGQ END=15911347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:4,0 chr1 15911348 . C . PASS END=15911348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr1 15911349 . G A, 65.19 PASS DP=6;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,6,0:1.000,0.000:6:0,4,0:0,2,0:15:103,18,0,233,18,233:227,21,0:0,0:6.5192e+01,1.5192e+01,1.3348e-01,2.2979e+02,4.9962e+01,2.3279e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,5:0,0,3,3 chr1 15911350 . T . PASS END=15911350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:4,0 chr1 15911351 . C . PASS END=15911351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr1 15911352 . G . PASS END=15911352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 15911353 . G . PASS END=15911367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,194:0,18,194:6,0 chr1 15911368 . T . PASS END=15911368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 15911369 . G . PASS END=15911369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 15911370 . G . PASS END=15911377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 15911378 . C . PASS END=15911378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 15911379 . C . PASS END=15911380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 15911381 . G . PASS END=15911382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 15911383 . T . PASS END=15911385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 15911386 . A . PASS END=15911386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 15911387 . A . PASS END=15911433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 15911434 . G . PASS END=15911434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 15911435 . C . PASS END=15911444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,242:7,0 chr1 15911445 . C . PASS END=15911446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 15911447 . C . PASS END=15911460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:6,0 chr1 15911461 . A . PASS END=15911462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,178:0,4,178:5,0 chr1 15944166 . A . PASS END=15944174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 15944175 . A . PASS END=15944191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 15944192 . G . PASS END=15944196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 15944197 . A . PASS END=15944197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 15944198 . C . PASS END=15944216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:18,0 chr1 15944217 . T . PASS END=15944217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 15944218 . C . PASS END=15944277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,43,255:19,0 chr1 15944278 . C . PASS END=15944278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 15944279 . T . PASS END=15944294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 15944295 . G . PASS END=15944303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:13,0 chr1 15953164 . A . PASS END=15953293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,106,1589:0,106,255:40,0 chr1 15956820 . A . PASS END=15956830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 15956831 . A . PASS END=15956831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 15956832 . T . PASS END=15956833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 15956834 . G . PASS END=15956834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 15956835 . A . PASS END=15956841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 15956842 . T . PASS END=15956842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 15956843 . A . PASS END=15956843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 15956844 . G . PASS END=15956844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 15956845 . T . PASS END=15956845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 15956846 . A . PASS END=15956855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:19,0 chr1 15956856 . C . PASS END=15956863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:22,0 chr1 15956864 . T . PASS END=15956867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 15956868 . G . PASS END=15956868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 15956869 . T . PASS END=15956869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 15956870 . C . PASS END=15956872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 15956873 . C . PASS END=15956874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 15956875 . G . PASS END=15956935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,917:0,65,255:26,0 chr1 15956936 . C . PASS END=15956993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1080:0,82,255:33,0 chr1 15956994 . A . PASS END=15957036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 15957037 . T . PASS END=15957056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:18,0 chr1 15959934 . A . PASS END=15959937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,613:0,40,255:19,0 chr1 15959938 . A . PASS END=15959941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 15959942 . T . PASS END=15959942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 15959943 . C . PASS END=15959948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:24,0 chr1 15959949 . T . PASS END=15959949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 15959950 . C . PASS END=15959951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 15959952 . T . PASS END=15959952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,800:0,28,255:21,0 chr1 15959953 . G . PASS END=15959963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:26,0 chr1 15959964 . A . PASS END=15959964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 15959965 . G . PASS END=15959965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 15959966 . C . PASS END=15960045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1215:0,84,255:38,0 chr1 15960046 . A . PASS END=15960046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1054:0,52,255:30,0 chr1 15960047 . G . PASS END=15960051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:30,0 chr1 15960052 . A . PASS END=15960052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:28,0 chr1 15960053 . G . PASS END=15960060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1087:0,82,255:31,0 chr1 15960293 . G . PASS END=15960305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,125,255:40,0 chr1 15964802 . G . PASS END=15964929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:40:0,88,1452:0,88,255:40,0 chr1 15970017 . G . PASS END=15970019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 15970020 . C . PASS END=15970020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 15970021 . C . PASS END=15970030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1119:0,82,255:33,0 chr1 15970031 . A . PASS END=15970031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:33,0 chr1 15970032 . T . PASS END=15970132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1097:0,80,255:40,0 chr1 15970133 . A . PASS END=15970133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:21,0 chr1 15970134 . G . PASS END=15970145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:48:20:0,48,720:0,60,255:18,0 chr1 15976215 . C . PASS END=15976318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:46:0,87,1305:0,122,255:40,0 chr1 15978201 . T . PASS END=15978390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,128,255:40,0 chr1 15983112 . A . PASS END=15983128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,149,255:40,0 chr1 15986364 . A . PASS END=15986366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 15986367 . T . PASS END=15986367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 15986368 . C . PASS END=15986370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 15986371 . C . PASS END=15986371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 15986372 . A . PASS END=15986387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,870:0,72,255:25,0 chr1 15986388 . G . PASS END=15986388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 15986389 . G . PASS END=15986390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 15986391 . T . PASS END=15986391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:28,0 chr1 15986392 . T . PASS END=15986393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,973:0,87,255:29,0 chr1 15986394 . A . PASS END=15986395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 15986396 . C . PASS END=15986398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 15986399 . T . PASS END=15986399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 15986400 . C . PASS END=15986400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 15986401 . C . PASS END=15986401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 15986402 . C . PASS END=15986405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 15986406 . C . PASS END=15986406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 15986407 . G . PASS END=15986420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1041:0,87,255:35,0 chr1 15986421 . A . PASS END=15986421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:31,0 chr1 15986422 . G . PASS END=15986450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1250:0,89,255:36,0 chr1 15986451 . G . PASS END=15986451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:32,0 chr1 15986452 . C . PASS END=15986957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:33:0,82,1119:0,82,255:40,0 chr1 15986958 . C . PASS END=15986958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:31,0 chr1 15986959 . C . PASS END=15986960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 15986961 . G . PASS END=15986961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1106:0,38,255:29,0 chr1 15986962 . A . PASS END=15988217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:33:0,82,1097:0,82,255:40,0 chr1 16008096 . A . PASS END=16008098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 16008099 . A . PASS END=16008194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,932:0,81,255:40,0 chr1 16011054 . A . PASS END=16011054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 16011055 . T . LowGQ END=16011055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,360:0,0,255:11,0 chr1 16011056 . G . PASS END=16011056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 16011057 . G . PASS END=16011057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 16011058 . A . PASS END=16011113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 16042732 . T . PASS END=16042732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:27,0 chr1 16042733 . T . PASS END=16042735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:29,0 chr1 16042736 . A . PASS END=16042743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 16042744 . T . PASS END=16042744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1058:0,60,255:32,0 chr1 16042745 . T . PASS END=16042765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1186:0,83,255:38,0 chr1 16042766 . T C, 50.00 PASS DP=37;MQ=250.00;MQRankSum=4.947;ReadPosRankSum=3.484;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,24,0:0.649,0.000:37:8,13,0:5,11,0:44:85,0,42,858,428,1287:255,0,255:13,0:5.0000e+01,1.6774e-04,4.5437e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,8,16:7,6,11,13 chr1 16042767 . C . PASS END=16042803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:38:0,84,1377:0,84,255:40,0 chr1 16042804 . C . PASS END=16042838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1260:0,95,255:40,0 chr1 16043202 . A . PASS END=16043304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1147:0,80,255:40,0 chr1 16043305 . G . PASS END=16043311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 16044388 . G . PASS END=16044390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16044391 . G . PASS END=16044400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:32,0 chr1 16044401 . G A, 50.00 PASS DP=34;MQ=249.71;MQRankSum=4.399;ReadPosRankSum=0.569;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,18,0:0.529,0.000:34:7,12,0:9,6,0:47:85,0,47,185,185,185:255,0,255:15,0:5.0000e+01,8.9566e-05,4.9744e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,9,11,7:8,8,9,9 chr1 16044402 . T . PASS END=16044426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1158:0,85,255:35,0 chr1 16044427 . T . PASS END=16044427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:33,2 chr1 16044428 . G . PASS END=16044428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1227:0,42,255:33,2 chr1 16044429 . G . PASS END=16044429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 16044430 . A . PASS END=16044438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1393:0,111,255:39,0 chr1 16044439 . T . PASS END=16044455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1360:0,100,255:38,0 chr1 16044456 . A . PASS END=16044456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:34,0 chr1 16044457 . A . PASS END=16044484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,94,255:38,0 chr1 16044485 . C . PASS END=16044485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16044486 . A . PASS END=16044487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,1048:0,41,255:26,0 chr1 16045033 . G . PASS END=16045120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:39:0,84,1276:0,84,255:40,0 chr1 16046229 . G . PASS END=16046231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 16046232 . G . PASS END=16046232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 16046233 . C . PASS END=16046394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1215:0,89,255:40,0 chr1 16046395 . C . PASS END=16046407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,83,255:26,0 chr1 16046408 . T . PASS END=16046415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:24:0,51,765:0,71,255:17,0 chr1 16046940 . A . PASS END=16046957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,118,1396:0,118,255:40,0 chr1 16046958 . T . PASS END=16046982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:43:0,113,1513:0,113,255:40,0 chr1 16047824 . A . PASS END=16047883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,124,255:40,0 chr1 16051812 . A . PASS END=16051825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 16051826 . G . PASS END=16051832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 16051833 . T . PASS END=16051833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 16051834 . C . PASS END=16051863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,535:0,42,255:19,0 chr1 16051864 . G . PASS END=16051892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:23,0 chr1 16051893 . C . PASS END=16051893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 16051894 . C . PASS END=16051899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 16051900 . G . PASS END=16051900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16051901 . C . PASS END=16051933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,724:0,63,255:23,0 chr1 16051934 . A . PASS END=16051934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:22,0 chr1 16051935 . C . PASS END=16051966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:23:0,65,839:0,65,255:25,0 chr1 16051967 . A . PASS END=16051967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 16051968 . C . PASS END=16051972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 16051973 . T . PASS END=16051973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 16051974 . C . PASS END=16052002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 16052003 . G . PASS END=16052003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 16052004 . A . PASS END=16052007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 16052008 . G . PASS END=16052040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:18:0,47,668:0,47,255:19,0 chr1 16052044 . A . PASS END=16052044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 16052046 . C . PASS END=16052046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 16053509 . G . PASS END=16053510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 16053511 . T . PASS END=16053511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 16053512 . C . PASS END=16053512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16053513 . A . PASS END=16053513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 16053514 . C . PASS END=16053522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1028:0,82,255:31,0 chr1 16053523 . A . PASS END=16053523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:29,0 chr1 16053524 . G . PASS END=16053530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 16053531 . G . PASS END=16053562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1168:0,83,255:36,0 chr1 16053563 . G . PASS END=16053563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1209:0,78,255:35,0 chr1 16053564 . G . PASS END=16053662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1177:0,87,255:40,0 chr1 16053663 . G . PASS END=16053687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 16053688 . A . PASS END=16053700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16053701 . G . PASS END=16053706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 16053707 . C . PASS END=16053719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr1 16053720 . A . PASS END=16053720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:13,0 chr1 16053721 . G . PASS END=16053745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:17,0 chr1 16053746 . G . PASS END=16053746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 16053747 . C . PASS END=16053755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 16053756 . G . PASS END=16053756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 16053757 . A . PASS END=16053767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,592:0,51,255:18,0 chr1 16053768 . A . PASS END=16053768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 16053769 . C . PASS END=16053777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 16053778 . A . PASS END=16053795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,540:0,32,255:13,0 chr1 16053796 . T . PASS END=16053796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:11,0 chr1 16053797 . G . PASS END=16053812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 16053813 . C . PASS END=16053813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 16053814 . A . PASS END=16053815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16053816 . C . PASS END=16053816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 16053817 . T . PASS END=16053824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 16053825 . C . PASS END=16053826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 16053827 . G . PASS END=16053827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 16053828 . C . PASS END=16053834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 16053835 . C . PASS END=16053835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 16053836 . C . PASS END=16053836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 16053837 . A . PASS END=16053837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 16053838 . G . PASS END=16053843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 16053844 . G . PASS END=16053850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 16053851 . C . PASS END=16053852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 16053853 . G . PASS END=16053853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:9,0 chr1 16053854 . T . PASS END=16053867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr1 16053868 . A . PASS END=16053868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:11,0 chr1 16053869 . C . PASS END=16053916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 16053917 . G . PASS END=16053918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 16053919 . T . PASS END=16053919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,368:0,25,255:13,0 chr1 16053920 . T . PASS END=16053955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,452:0,42,255:18,0 chr1 16053956 . C . PASS END=16053965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 16053966 . T . PASS END=16053966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,566:0,27,255:18,0 chr1 16053967 . T . PASS END=16053970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:19,0 chr1 16053971 . C . PASS END=16053977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16053978 . A . PASS END=16053978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 16053979 . G . PASS END=16053982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:22,0 chr1 16053983 . A . PASS END=16053983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr1 16053984 . A . PASS END=16053985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:22,0 chr1 16053986 . C . PASS END=16054003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,615:0,40,255:19,0 chr1 16054004 . C . PASS END=16054005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 16054006 . G . PASS END=16054009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,688:0,44,255:19,0 chr1 16054010 . C . PASS END=16054012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16054013 . T . PASS END=16054017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:19,0 chr1 16054018 . C . PASS END=16054018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 16054019 . T . PASS END=16054019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:20,0 chr1 16054020 . G . PASS END=16054020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 16054021 . C . PASS END=16054021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 16054022 . A . PASS END=16054031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,762:0,66,255:22,0 chr1 16054032 . C . PASS END=16054033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 16054034 . A . PASS END=16054037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 16054038 . C . PASS END=16054038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 16054039 . T . PASS END=16054041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,776:0,66,255:22,0 chr1 16054042 . A . PASS END=16054042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 16054043 . T . PASS END=16054046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 16054047 . C . PASS END=16054047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 16054048 . C . PASS END=16054049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 16054050 . A . PASS END=16054050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:19,0 chr1 16054051 . G . PASS END=16054051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16054052 . T . PASS END=16054052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:20,0 chr1 16054053 . A . PASS END=16054057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 16054058 . T . PASS END=16054058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 16054059 . G . PASS END=16054063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 16054064 . T . PASS END=16054064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 16054065 . G . PASS END=16054065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16054066 . C . PASS END=16054066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:22,0 chr1 16054067 . T . PASS END=16054068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 16054069 . G . PASS END=16054069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 16054070 . C . PASS END=16054089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,820:0,62,255:26,0 chr1 16054090 . G . PASS END=16054090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:23,0 chr1 16054091 . A . PASS END=16054094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr1 16054095 . G . PASS END=16054095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr1 16054096 . A . PASS END=16054096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 16054097 . G . PASS END=16054097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:22,0 chr1 16054098 . G . PASS END=16054119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,818:0,64,255:25,0 chr1 16054120 . A . PASS END=16054120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:20,0 chr1 16054121 . G . PASS END=16054123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 16054124 . T . PASS END=16054124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 16054125 . A . PASS END=16054153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,901:0,62,255:25,0 chr1 16054154 . C . PASS END=16054154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 16054155 . C . PASS END=16054156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 16054157 . G . PASS END=16054157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 16054158 . C . PASS END=16054180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:24,0 chr1 16054181 . T . PASS END=16054181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr1 16054182 . G . PASS END=16054197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 16054198 . C . PASS END=16054199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16054200 . G . PASS END=16054213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,961:0,65,255:26,0 chr1 16054214 . T . PASS END=16054214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,840:0,47,255:24,0 chr1 16054215 . C . PASS END=16054242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:25,0 chr1 16054243 . G . PASS END=16054245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16054246 . C . PASS END=16054252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 16054253 . G . PASS END=16054255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16054256 . T . PASS END=16054281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,955:0,75,255:26,0 chr1 16054282 . A . PASS END=16054282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:22,0 chr1 16054283 . G . PASS END=16054295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 16054296 . C . PASS END=16054324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,598:0,48,255:19,0 chr1 16054325 . C . PASS END=16054327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 16054574 . A . PASS END=16054578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1094:0,87,255:34,0 chr1 16054579 . A . PASS END=16054579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 16054580 . C . PASS END=16054643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:34:0,92,1294:0,92,255:40,0 chr1 16054762 . A . PASS END=16054764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16054765 . A . PASS END=16054766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16054767 . C . PASS END=16054779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 16054780 . G . PASS END=16054789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 16054790 . A . PASS END=16054790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 16054791 . G . PASS END=16054800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 16054801 . C . PASS END=16054824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,939:0,67,255:26,0 chr1 16054825 . G . PASS END=16054841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:16:0,42,630:0,48,255:18,0 chr1 16054842 . G . PASS END=16054842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 16054843 . C . PASS END=16054847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 16054848 . G . PASS END=16054848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 16054849 . A . PASS END=16054852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 16055164 . G . PASS END=16055228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1149:0,82,255:38,0 chr1 16055597 . G . PASS END=16055598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 16055599 . T . PASS END=16055599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 16055600 . G . PASS END=16055600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 16055601 . G . PASS END=16055601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr1 16055602 . C . PASS END=16055628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,651:0,47,255:19,0 chr1 16055629 . G . PASS END=16055629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16055630 . T . PASS END=16055630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:20,0 chr1 16055631 . G . PASS END=16055639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 16055640 . G . PASS END=16055640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 16055641 . C . PASS END=16055654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,811:0,66,255:25,0 chr1 16055655 . T . PASS END=16055655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 16055656 . G . PASS END=16055662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16055663 . A . PASS END=16055663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:23,0 chr1 16055664 . C . PASS END=16055667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 16055668 . T . PASS END=16055668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 16055669 . G . PASS END=16055670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16055671 . T . PASS END=16055673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 16055674 . G . PASS END=16055678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 16055679 . T . PASS END=16055679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 16055680 . G . PASS END=16055685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 16056292 . G . PASS END=16056296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 16056297 . T . PASS END=16056313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 16056314 . T . PASS END=16056322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:17,0 chr1 16056323 . A . PASS END=16056323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 16056324 . T . PASS END=16056326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 16056327 . A . PASS END=16056332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 16056333 . G . PASS END=16056343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 16056344 . C . PASS END=16056347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16056348 . A . PASS END=16056351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 16056352 . C . PASS END=16056352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 16056353 . A . PASS END=16056353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16056354 . G . PASS END=16056354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 16056355 . C . PASS END=16056363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr1 16056364 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=1.622;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:7,8,0:4,5,0:48:85,0,50,465,385,850:255,0,255:11,0:5.0000e+01,6.7045e-05,5.2640e+01,4.5000e+02,4.2017e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,7,6:6,5,8,5 chr1 16056365 . G . PASS END=16056368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:26,0 chr1 16056369 . C . PASS END=16056369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,884:0,47,255:25,0 chr1 16056370 . C . PASS END=16056401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,846:0,61,255:25,0 chr1 16056402 . T . PASS END=16056402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,805:0,45,255:22,0 chr1 16056403 . G . PASS END=16056406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 16056407 . C . PASS END=16056407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 16056408 . A . PASS END=16056408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 16056409 . A . PASS END=16056409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 16056410 . G . PASS END=16056410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 16056411 . A . PASS END=16056411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,702:0,22,255:20,0 chr1 16056412 . A . PASS END=16056412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 16056413 . T . PASS END=16056415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16056416 . A . PASS END=16056416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 16056417 . A . PASS END=16056417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 16056418 . G . PASS END=16056420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:22,0 chr1 16056421 . T . PASS END=16056422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 16056423 . A . PASS END=16056423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 16056424 . G . PASS END=16056424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16057027 . G . PASS END=16057027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16057028 . C . PASS END=16057046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 16057047 . C . PASS END=16057101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:19,0 chr1 16057102 . C . PASS END=16057102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 16057103 . C . PASS END=16057105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 16057106 . G . PASS END=16057114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 16057115 . C . PASS END=16057115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16057116 . A . PASS END=16057203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:24,0 chr1 16057204 . T . PASS END=16057204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,638:0,49,255:20,0 chr1 16057205 . T . PASS END=16057210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 16057211 . T . PASS END=16057217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 16057687 . C . PASS END=16057715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr1 16057716 . G . PASS END=16057752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,68,255:26,0 chr1 16058384 . G . PASS END=16058387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16058388 . G . PASS END=16058388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16058389 . A . PASS END=16058389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr1 16058390 . G . PASS END=16058390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16058391 . C . PASS END=16058392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16058393 . G . PASS END=16058412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,598:0,63,255:22,0 chr1 16058413 . C . PASS END=16058413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 16058414 . C . PASS END=16058418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 16058419 . C . PASS END=16058419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 16058420 . C . PASS END=16058449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,869:0,65,255:26,0 chr1 16058450 . T . PASS END=16058450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,734:0,39,255:24,0 chr1 16058451 . C . PASS END=16058465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,915:0,64,255:26,0 chr1 16058466 . T . PASS END=16058466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 16058467 . G . PASS END=16058476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 16058477 . A . PASS END=16058477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 16058478 . A . PASS END=16058501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 16058502 . G . PASS END=16058502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 16058503 . C . PASS END=16058518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 16058519 . T . PASS END=16058525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:12,0 chr1 16058526 . C . PASS END=16058526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:11,0 chr1 16058527 . A . PASS END=16058538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 16058539 . A . PASS END=16058539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 16058540 . A . PASS END=16058543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 16058845 . G . PASS END=16058850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 16058851 . C . PASS END=16058865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 16058866 . C . PASS END=16058872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16058873 . C . PASS END=16058877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,817:0,63,255:23,0 chr1 16058878 . A . PASS END=16058879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 16058880 . A . PASS END=16058891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,823:0,69,255:25,0 chr1 16058892 . G . PASS END=16058892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 16058893 . G . PASS END=16058894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 16058895 . C . PASS END=16058909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 16058910 . C . PASS END=16058910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:27,0 chr1 16058911 . C . PASS END=16058911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16058912 . T . PASS END=16058912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr1 16058913 . C . PASS END=16058915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16058916 . T . PASS END=16058916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 16058917 . A . PASS END=16058917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 16058918 . C . PASS END=16058925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16058926 . G . PASS END=16058926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16058927 . A . PASS END=16058927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:25,0 chr1 16058928 . G . PASS END=16058932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 16058933 . G . PASS END=16058933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16058934 . C . PASS END=16058934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 16058935 . C . PASS END=16058937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 16058938 . A . PASS END=16058985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 16058986 . G . PASS END=16059006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:14:0,42,512:0,42,255:18,0 chr1 16059007 . A . PASS END=16059007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16059008 . A . PASS END=16059008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 16059009 . G . PASS END=16059024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 16059027 . G . PASS END=16059027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 16059107 . G . PASS END=16059118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,607:0,51,255:19,0 chr1 16059119 . G . PASS END=16059119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 16059120 . A . PASS END=16059120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 16059121 . C . PASS END=16059121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 16059122 . A . PASS END=16059122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr1 16059123 . G . PASS END=16059126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 16059127 . G . PASS END=16059127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 16059128 . C . PASS END=16059134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:23,0 chr1 16059135 . T . PASS END=16059135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 16059136 . C . PASS END=16059138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16059139 . G . PASS END=16059139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 16059140 . C . PASS END=16059164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,823:0,69,255:26,0 chr1 16059165 . C . PASS END=16059166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr1 16059167 . T . PASS END=16059188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 16059189 . C . PASS END=16059190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16059191 . G . PASS END=16059203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:25,0 chr1 16059204 . G . PASS END=16059204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 16059205 . G . PASS END=16059205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 16059206 . T . PASS END=16059206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 16059207 . G . PASS END=16059213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 16059214 . C . PASS END=16059214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 16059215 . A . PASS END=16059223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr1 16060292 . G . PASS END=16060389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1249:0,80,255:40,0 chr1 16060390 . T . PASS END=16060390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1087:0,71,255:30,0 chr1 16060391 . C . PASS END=16060405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 16060406 . G . PASS END=16060420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,990:0,65,255:26,0 chr1 16060421 . T . PASS END=16060429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,69,255:18,0 chr1 16062981 . A . PASS END=16062991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,108:0,9,108:3,0 chr1 16062992 . G . PASS END=16063013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 16063014 . C . LowGQ END=16063014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 16063015 . T . PASS END=16063017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 16063018 . G . PASS END=16063018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 16063019 . T . PASS END=16063027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:4,0 chr1 16063028 . C . PASS END=16063028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:3,0 chr1 16063029 . T . PASS END=16063040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:5,0 chr1 16063041 . T . LowGQ END=16063042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:5:0,0,116:0,0,140:5,0 chr1 16063043 . T . PASS END=16063051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 16063052 . C . PASS END=16063052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 16063053 . A . PASS END=16063056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,164:0,18,164:6,0 chr1 16063057 . C . PASS END=16063058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 16063059 . C . PASS END=16063060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 16063061 . G . PASS END=16063064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 16063065 . G . PASS END=16063065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 16063066 . T . PASS END=16063067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 16063068 . G . PASS END=16063068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 16063069 . T . PASS END=16063069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16063070 . G . PASS END=16063070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 16063071 . A . PASS END=16063073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16063074 . A . PASS END=16063075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,272:0,13,255:8,0 chr1 16063076 . G . PASS END=16063076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16063077 . C . PASS END=16063088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 16063089 . C . PASS END=16063089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 16063090 . A . PASS END=16063100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 16063101 . C . PASS END=16063111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16063112 . C . PASS END=16063112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 16063113 . A . PASS END=16063116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 16063117 . A . PASS END=16063121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 16063122 . C . PASS END=16063128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16063129 . A . PASS END=16063130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 16063131 . C . PASS END=16063136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16063137 . T . PASS END=16063137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 16063138 . T . PASS END=16063143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 16063144 . C . PASS END=16063170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 16063171 . A . PASS END=16063206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 16063207 . G . PASS END=16063211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 16063212 . C . PASS END=16063218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr1 16063219 . A . PASS END=16063220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16063221 . G . PASS END=16063229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 16063230 . A . PASS END=16063230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 16063231 . A . PASS END=16063254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 16063255 . G . PASS END=16063255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 16063256 . C . PASS END=16063275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 16063276 . T . PASS END=16063282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 16063283 . G . PASS END=16063285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 16063286 . A . PASS END=16063286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr1 16063287 . C . PASS END=16063318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 16063319 . G . PASS END=16063319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 16063320 . G . PASS END=16063358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 16064424 . A . PASS END=16064434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 16064435 . G . PASS END=16064435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,873:0,45,255:23,0 chr1 16064436 . C . PASS END=16064444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,953:0,65,255:26,0 chr1 16064445 . C . PASS END=16064445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:26,0 chr1 16064446 . A . PASS END=16064446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:25,0 chr1 16064447 . G . PASS END=16064447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16064448 . A . PASS END=16064448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 16064449 . C . PASS END=16064449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 16064450 . A G, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=3.130;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:6,8,0:7,6,0:48:85,0,50,501,436,937:255,0,255:13,0:5.0000e+01,6.5751e-05,5.2887e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,7,7:4,9,7,7 chr1 16064451 . G . PASS END=16064451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16064452 . T . PASS END=16064452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:27,0 chr1 16064453 . G . PASS END=16064453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 16064454 . G . PASS END=16064454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16064455 . C . PASS END=16064456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:28,0 chr1 16064457 . G . PASS END=16064457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16064458 . C . PASS END=16064458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:27,0 chr1 16064459 . A . PASS END=16064459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 16064460 . G . PASS END=16064460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16064461 . T . PASS END=16064461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 16064462 . G . PASS END=16064462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16064463 . G . PASS END=16064465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1041:0,52,255:27,0 chr1 16064466 . G . PASS END=16064466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16064467 . T . PASS END=16064467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:27,0 chr1 16064468 . G . PASS END=16064470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 16064471 . A . PASS END=16064471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr1 16064472 . C . PASS END=16064472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16064473 . A . PASS END=16064473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 16064474 . C . PASS END=16064475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 16064476 . A . PASS END=16064476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 16064477 . G . PASS END=16064479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16064480 . C . PASS END=16064487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1000:0,70,255:26,0 chr1 16064488 . A . PASS END=16064489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:25,0 chr1 16064588 . A . PASS END=16064591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:25,0 chr1 16064592 . T . PASS END=16064592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 16064593 . C . PASS END=16064638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,856:0,72,255:25,0 chr1 16064639 . C . PASS END=16064639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 16064640 . T . PASS END=16064659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:25,0 chr1 16064660 . G . PASS END=16064660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 16064661 . C . PASS END=16064677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 16064678 . G . PASS END=16064704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr1 16064705 . T . PASS END=16064705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 16064706 . T . PASS END=16064710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 16064711 . T . PASS END=16064711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:13,0 chr1 16064712 . C . PASS END=16064722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:13,0 chr1 16064723 . T . PASS END=16064723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr1 16064724 . G . PASS END=16064740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:10,0 chr1 16065089 . T . PASS END=16065091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 16065092 . C . PASS END=16065092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 16065093 . T . PASS END=16065098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1164:0,86,255:34,0 chr1 16065099 . A . PASS END=16065135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:86:34:0,86,1233:0,86,255:40,0 chr1 16065136 . C G, 49.56 PASS DP=45;MQ=248.52;MQRankSum=5.176;ReadPosRankSum=3.196;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:16,10,0:8,11,0:48:84,0,50,709,848,1558:255,0,255:21,0:4.9559e+01,6.9893e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,7,14:15,9,12,9 chr1 16065137 . A . PASS END=16065173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,116,1628:0,116,255:40,0 chr1 16065174 . A . PASS END=16065223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1305:0,98,255:40,0 chr1 16065476 . C . PASS END=16065484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,576:0,44,255:19,0 chr1 16065485 . A . PASS END=16065485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 16065486 . G . PASS END=16065487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16065488 . C . PASS END=16065488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:19,0 chr1 16065489 . A . PASS END=16065489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 16065490 . G . PASS END=16065494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 16065495 . A . PASS END=16065495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,660:0,36,255:21,0 chr1 16065496 . C . PASS END=16065499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:24,0 chr1 16065519 . C . PASS END=16065522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 16065523 . T . PASS END=16065523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,782:0,42,255:21,0 chr1 16065524 . A . PASS END=16065535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,884:0,72,255:24,0 chr1 16065536 . C . PASS END=16065536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 16065537 . A . PASS END=16065540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,809:0,72,255:24,0 chr1 16065541 . C . PASS END=16065541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 16065542 . T . PASS END=16065550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 16065551 . G . PASS END=16065551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 16065552 . G . PASS END=16065557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,823:0,69,255:23,0 chr1 16065719 . G . PASS END=16065734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 16065735 . G . PASS END=16065739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 16065740 . A . PASS END=16065745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 16065746 . T . PASS END=16065746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 16065747 . G . PASS END=16065747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 16065748 . C . PASS END=16065758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 16065759 . T . PASS END=16065759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:5,0 chr1 16065760 . C . PASS END=16065772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:6,0 chr1 16065773 . G . PASS END=16065784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 16065785 . C . PASS END=16065786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,197:6,0 chr1 16065787 . C . PASS END=16065809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 16065810 . A . PASS END=16065900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 16065901 . G . PASS END=16065901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16069055 . A . PASS END=16069100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,648:0,60,255:26,0 chr1 16069101 . C . PASS END=16069101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16069102 . C . PASS END=16069112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1007:0,71,255:26,0 chr1 16069113 . G . PASS END=16069119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 16069120 . C . PASS END=16069142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,909:0,65,255:25,0 chr1 16069330 . G . PASS END=16069330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 16069331 . C . PASS END=16069332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 16069333 . T . PASS END=16069334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr1 16069335 . A . PASS END=16069335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr1 16069336 . T . PASS END=16069336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 16069337 . C . PASS END=16069337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:23,0 chr1 16069338 . G . PASS END=16069341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 16069342 . C . PASS END=16069342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:25,0 chr1 16069343 . C . PASS END=16069343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,914:0,26,255:23,0 chr1 16069344 . C . PASS END=16069352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 16069353 . T . PASS END=16069353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,809:0,48,255:23,0 chr1 16069354 . T . PASS END=16069358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 16069359 . C . PASS END=16069359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:24,0 chr1 16069360 . T . PASS END=16069366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:25,0 chr1 16069367 . C . PASS END=16069367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:23,0 chr1 16069368 . C . PASS END=16069374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:24,0 chr1 16069375 . A . PASS END=16069375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 16069376 . A . PASS END=16069376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 16069377 . G . PASS END=16069377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 16069378 . T . PASS END=16069378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,717:0,55,255:23,0 chr1 16069379 . T . PASS END=16069380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16069381 . A . PASS END=16069382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 16069383 . T . PASS END=16069394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 16069395 . T . PASS END=16069395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 16069396 . G . PASS END=16069401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16069402 . A . PASS END=16069402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:23,0 chr1 16069515 . T . PASS END=16069518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16069519 . C . PASS END=16069543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,996:0,80,255:32,0 chr1 16069544 . G . PASS END=16069544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16069545 . G . PASS END=16069656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1216:0,83,255:37,0 chr1 16069657 . C . PASS END=16069657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 16069658 . G . PASS END=16069670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:33,0 chr1 16069671 . G . PASS END=16069671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 16069672 . C . PASS END=16069672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 16069673 . T . PASS END=16069679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16069680 . C . PASS END=16069680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 16069681 . C . PASS END=16069689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 16070655 . G . PASS END=16070664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 16070665 . G . PASS END=16070665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 16070666 . T . PASS END=16070686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,550:0,45,255:19,0 chr1 16070687 . C . PASS END=16070687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 16070688 . T . PASS END=16070692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16070693 . G . PASS END=16070694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16070695 . T . PASS END=16070695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 16070696 . G . PASS END=16070702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 16070703 . T . PASS END=16070710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 16070711 . G . PASS END=16070727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:21,0 chr1 16070728 . G . PASS END=16070728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr1 16070729 . T . PASS END=16070730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 16070731 . G . PASS END=16070733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16070734 . T . PASS END=16070814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,808:0,65,255:26,0 chr1 16070815 . G . PASS END=16070815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 16070816 . T . PASS END=16070816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16070817 . G . PASS END=16070817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 16070818 . C . PASS END=16070829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 16070830 . A . PASS END=16070830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 16070831 . C . PASS END=16070833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16070834 . C . PASS END=16070834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 16070835 . C . PASS END=16070852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:21,0 chr1 16070853 . G . PASS END=16070853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,692:0,14,255:18,0 chr1 16070854 . A . PASS END=16070854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16070855 . G . PASS END=16070855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 16070856 . C . PASS END=16070856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16070857 . T . PASS END=16070860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr1 16070861 . C . PASS END=16070869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 16070870 . G . PASS END=16070870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 16070871 . C . PASS END=16070872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16070873 . C . PASS END=16070887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 16070888 . C . PASS END=16070888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,511:0,26,255:16,0 chr1 16070889 . C . PASS END=16070889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 16070890 . T . LowGQ END=16070890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,6:18:0:18:0,0,269:60,0,255:11,0 chr1 16070891 . G . PASS END=16070891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:16,0 chr1 16070892 . G . PASS END=16070893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 16070894 . C . PASS END=16070894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:15,0 chr1 16070895 . C . PASS END=16070895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 16070896 . T . PASS END=16070896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:15,0 chr1 16070897 . G . PASS END=16070897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 16070898 . C . PASS END=16070898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,459:0,18,255:14,0 chr1 16070899 . T . PASS END=16070899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 16070900 . G . PASS END=16070901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 16070902 . C . PASS END=16070902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:23:19:0,23,484:0,23,255:12,0 chr1 16070903 . C . PASS END=16070904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 16070905 . A . LowGQ END=16070906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:18:0,0,411:9,0,255:10,0 chr1 16070907 . G . PASS END=16070911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:33:15:0,33,495:0,37,255:12,0 chr1 16070912 . T . LowGQ END=16070913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:14:0,0,298:0,0,255:9,0 chr1 16070914 . G . PASS END=16070914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 16070915 . C . PASS END=16070915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:9,0 chr1 16070916 . C . PASS END=16070916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 16070917 . T . PASS END=16070918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr1 16070919 . C . PASS END=16070923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 16070924 . G . PASS END=16070924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 16070925 . C . PASS END=16070925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 16070926 . T . PASS END=16070927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 16070928 . C . PASS END=16070928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 16070929 . T . PASS END=16070929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 16070930 . G . PASS END=16070930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,371:0,6,255:11,0 chr1 16070931 . G . PASS END=16070936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 16070937 . G . PASS END=16070938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 16070939 . C . PASS END=16070940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 16070941 . T . LowGQ END=16070941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,216:64,0,255:9,0 chr1 16070942 . G . PASS END=16070945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 16070946 . A . PASS END=16070947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:13,0 chr1 16070948 . A . PASS END=16070948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16070949 . G . PASS END=16070949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 16070950 . C . PASS END=16070950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16070951 . C . PASS END=16070952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 16070953 . T . PASS END=16070953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 16070954 . T . PASS END=16070954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 16070955 . G . PASS END=16070955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16070956 . C . PASS END=16070956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 16070957 . C . PASS END=16070958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 16070959 . T . PASS END=16070960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 16070961 . G . PASS END=16070967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,527:0,31,255:13,0 chr1 16070968 . T . LowGQ END=16070969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:13:0,0,426:0,0,255:12,0 chr1 16070970 . G . PASS END=16070971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 16070972 . A . PASS END=16070973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 16070974 . C . PASS END=16070976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 16070977 . T . PASS END=16070978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 16070979 . G . PASS END=16070983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 16070984 . C . PASS END=16070988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 16070989 . A . PASS END=16070990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr1 16070991 . C . PASS END=16070993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 16070994 . G . PASS END=16070994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 16070995 . A . PASS END=16070996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 16070997 . T . PASS END=16070998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:13,0 chr1 16070999 . C . PASS END=16071000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16071001 . T . PASS END=16071001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 16071002 . G . PASS END=16071041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,366:0,33,255:13,0 chr1 16071042 . A . PASS END=16071044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16071045 . T . PASS END=16071047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16071048 . T . PASS END=16071048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 16071049 . A . PASS END=16071050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 16071051 . A . PASS END=16071075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 16073362 . A . PASS END=16073401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 16073402 . G . PASS END=16073402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 16073403 . A . PASS END=16073435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr1 16073436 . C . PASS END=16073436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 16073437 . T . PASS END=16073467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,566:0,45,255:18,0 chr1 16073468 . G . PASS END=16073539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr1 16073540 . C . PASS END=16073549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 16074041 . G . PASS END=16074059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 16074060 . C . PASS END=16074064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 16074065 . G . PASS END=16074070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16074071 . A . PASS END=16074100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 16074101 . C . PASS END=16074118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 16074119 . C . PASS END=16074124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,291:0,30,255:10,0 chr1 16074125 . T . PASS END=16074127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16091479 . A . PASS END=16091487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 16091488 . A . PASS END=16091488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 16091489 . A . PASS END=16091493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 16091494 . G . PASS END=16091495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 16091496 . G . PASS END=16091496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 16091497 . A . PASS END=16091519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:18,0 chr1 16091520 . T . PASS END=16091520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:17,0 chr1 16091521 . A . PASS END=16091534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr1 16091535 . C . PASS END=16091540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 16091541 . C . PASS END=16091544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16091545 . G . PASS END=16091547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 16091548 . G . PASS END=16091549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 16091550 . G . PASS END=16091554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:22,0 chr1 16091555 . T . PASS END=16091555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 16091556 . G . PASS END=16091584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:24,0 chr1 16091585 . A . PASS END=16091586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 16091587 . G . PASS END=16091587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 16091588 . C . PASS END=16091607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 16091608 . G . PASS END=16091638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:23,0 chr1 16091639 . C . PASS END=16091656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 16091657 . C . PASS END=16091658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16091659 . A . PASS END=16091670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:18,0 chr1 16091671 . A . PASS END=16091671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 16091672 . C . PASS END=16091677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,675:0,41,255:18,0 chr1 16091678 . G . PASS END=16091678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 16091679 . C . PASS END=16091687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 16091688 . A . PASS END=16091689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 16091690 . C . PASS END=16091692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 16091693 . C . PASS END=16091704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 16091705 . C . PASS END=16091705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 16091706 . A . PASS END=16091718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 16091719 . T . PASS END=16091721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16091722 . A . PASS END=16091722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 16091723 . A . PASS END=16091725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 16091726 . G . PASS END=16091728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 16093871 . G . PASS END=16093871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 16093872 . A . PASS END=16093872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16093873 . T . PASS END=16093873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16093874 . G . PASS END=16093874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:9,0 chr1 16093875 . C . LowGQ END=16093875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,268:3,0,255:10,0 chr1 16093876 . C . PASS END=16093877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16093878 . A . PASS END=16093878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,288:0,3,255:8,0 chr1 16093879 . C . PASS END=16093879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 16093880 . C . PASS END=16093880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 16093881 . C . PASS END=16093881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 16093882 . C . PASS END=16093882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 16093883 . C . PASS END=16093883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 16093884 . T . LowGQ END=16093884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,263:0,0,255:9,0 chr1 16093885 . C . PASS END=16093886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr1 16093887 . T . PASS END=16093887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,311:0,6,255:11,0 chr1 16093888 . C . PASS END=16093889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 16093890 . T . LowGQ END=16093890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,253:27,0,255:9,0 chr1 16093891 . G . PASS END=16093891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:14,0 chr1 16093892 . T . PASS END=16093894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,501:0,45,255:16,0 chr1 16093895 . T . PASS END=16093896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:15:16:0,15,405:0,15,255:15,0 chr1 16093897 . G . PASS END=16093897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 16093898 . A . PASS END=16093898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:15,0 chr1 16093899 . T . PASS END=16093900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,560:0,34,255:16,0 chr1 16093901 . G . PASS END=16093903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 16093904 . A . PASS END=16093904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:18,0 chr1 16093905 . G . PASS END=16093906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16093907 . A . PASS END=16093907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,552:0,27,255:18,0 chr1 16093908 . C . PASS END=16093911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:19,0 chr1 16093912 . C . PASS END=16093912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr1 16093913 . T . PASS END=16093918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 16093919 . A . PASS END=16093919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,720:0,11,255:20,0 chr1 16093920 . C . PASS END=16093920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 16093921 . C . PASS END=16093922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 16093923 . G . PASS END=16093923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr1 16093924 . G . PASS END=16093924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16093925 . A . PASS END=16093928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:21,0 chr1 16093929 . C . PASS END=16093929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:19,0 chr1 16093930 . C . PASS END=16093934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 16093935 . A . LowGQ END=16093935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,506:37,0,255:18,0 chr1 16093936 . C . PASS END=16093937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 16093938 . C . PASS END=16093940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16093941 . T . LowGQ END=16093941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,557:14,0,255:18,0 chr1 16093942 . C . PASS END=16093943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16093944 . A . LowGQ END=16093944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,553:20,0,255:19,0 chr1 16093945 . C . PASS END=16093945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16093946 . C . PASS END=16093946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 16093947 . G . LowGQ END=16093947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,609:4,0,255:20,0 chr1 16093948 . C . PASS END=16093949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16093950 . C . PASS END=16093951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr1 16093952 . C . PASS END=16093952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16093953 . T . LowGQ END=16093953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,615:3,0,255:20,0 chr1 16093954 . C . PASS END=16093955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16093956 . A . PASS END=16093956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:21,0 chr1 16093957 . G . PASS END=16093957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:21,0 chr1 16093958 . T . PASS END=16093958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,681:0,19,255:20,0 chr1 16093959 . G . PASS END=16093959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16093960 . C . PASS END=16093960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:21,0 chr1 16093961 . T . PASS END=16093961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,643:0,19,255:20,0 chr1 16093962 . T . PASS END=16093966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,692:0,36,255:21,0 chr1 16093967 . C . PASS END=16093967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 16093968 . T . PASS END=16093968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,723:0,39,255:21,0 chr1 16093969 . T . PASS END=16093969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16093970 . C . PASS END=16093970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:21,0 chr1 16093971 . T . PASS END=16093971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:20,0 chr1 16093972 . G . PASS END=16093972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16093973 . A . PASS END=16093974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 16093975 . G . PASS END=16093975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:18,0 chr1 16093976 . A . PASS END=16093976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 16093977 . G . PASS END=16093977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:21:23:0,21,611:0,21,255:18,0 chr1 16093978 . G . PASS END=16093978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16093979 . A . PASS END=16093979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr1 16093980 . G . PASS END=16093980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16093981 . G . LowGQ END=16093981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,706:8,0,255:19,0 chr1 16093982 . C . PASS END=16093983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,778:0,41,255:21,0 chr1 16093984 . C . PASS END=16093985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 16093986 . T . PASS END=16093988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:22,0 chr1 16093989 . T . PASS END=16093989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:21,0 chr1 16093990 . C . PASS END=16093990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 16093991 . C . PASS END=16093992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 16093993 . A . PASS END=16093993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 16093994 . T . PASS END=16093994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,692:0,36,255:21,0 chr1 16093995 . G . PASS END=16093995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 16093996 . G . PASS END=16093999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16094000 . C . PASS END=16094000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,703:0,52,255:21,0 chr1 16094001 . C . PASS END=16094001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16094002 . T . PASS END=16094002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 16094003 . C . PASS END=16094005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16094006 . T . PASS END=16094006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:20,0 chr1 16094007 . C . PASS END=16094008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16094009 . T . PASS END=16094009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,714:0,14,255:20,0 chr1 16094010 . T . PASS END=16094010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 16094011 . G . PASS END=16094011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:20,0 chr1 16094012 . C . PASS END=16094013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:18,0 chr1 16094014 . G . PASS END=16094014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,647:0,13,255:17,0 chr1 16094015 . A . PASS END=16094015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:15,0 chr1 16094016 . C . PASS END=16094016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 16094017 . T . PASS END=16094017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,678:0,27,255:16,0 chr1 16094018 . T . PASS END=16094023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,668:0,43,255:16,0 chr1 16094024 . A . PASS END=16094024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:14,0 chr1 16094025 . G . PASS END=16094032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,540:0,32,255:13,0 chr1 16094033 . T . PASS END=16094033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,496:0,1,255:10,0 chr1 16094034 . G . PASS END=16094035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,480:0,26,255:11,0 chr1 16094036 . C . PASS END=16094039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 16094040 . G . PASS END=16094040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 16094041 . C . PASS END=16094045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 16094046 . G . PASS END=16094046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 16094047 . C . PASS END=16094048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 16094049 . C . PASS END=16094054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 16094055 . A . PASS END=16094055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 16094056 . C . PASS END=16094058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 16095023 . G . PASS END=16095037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 16095038 . C . PASS END=16095046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 16095047 . C . PASS END=16095047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 16095048 . A . PASS END=16095070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,568:0,45,255:19,0 chr1 16095071 . G . PASS END=16095099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr1 16095100 . A . PASS END=16095101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 16095102 . C . PASS END=16095125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 16096904 . A . PASS END=16096907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16096908 . C . PASS END=16096924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:16,0 chr1 16096925 . A . PASS END=16096925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 16096926 . G . PASS END=16096926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 16096927 . A . PASS END=16096927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 16096928 . C . PASS END=16096932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 16096933 . T . PASS END=16096933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 16096934 . C T, 47.98 PASS DP=16;MQ=241.15;MQRankSum=0.380;ReadPosRankSum=1.247;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,6,0:0.375,0.000:16:3,4,0:7,2,0:47:83,0,50,215,329,543:177,0,255:10,0:4.7982e+01,9.0861e-05,5.3000e+01,2.1458e+02,3.6364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,2,4:6,4,4,2 chr1 16096935 . C . PASS END=16096971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:19,0 chr1 16096972 . T . PASS END=16096981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,675:0,41,255:17,0 chr1 16096982 . A . PASS END=16096983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 16096984 . T . PASS END=16096991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 16096992 . G . PASS END=16096994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16096995 . C . PASS END=16097019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 16097020 . G . PASS END=16097030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 16097031 . C . PASS END=16097048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 16097049 . A . PASS END=16097059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 16097060 . A . PASS END=16097073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,258:0,24,255:8,0 chr1 16101113 . G . PASS END=16101113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 16101114 . A . PASS END=16101116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 16101117 . C . PASS END=16101117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 16101118 . A . PASS END=16101158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:23,0 chr1 16101159 . A . PASS END=16101159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 16101160 . C . PASS END=16101182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:26,0 chr1 16101183 . C . PASS END=16101184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16101185 . T . PASS END=16101203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 16101204 . C . PASS END=16101204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:25,0 chr1 16101205 . G . PASS END=16101205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 16101206 . T . PASS END=16101208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 16101209 . G . PASS END=16101210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 16101211 . G . PASS END=16101212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 16101213 . C . PASS END=16101214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 16101215 . T . PASS END=16101215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:25,0 chr1 16101216 . G . PASS END=16101239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,905:0,65,255:26,0 chr1 16101240 . G . PASS END=16101241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16101242 . T . PASS END=16101242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:26,0 chr1 16101243 . T . PASS END=16101245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16101246 . C . PASS END=16101246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:25,0 chr1 16101247 . C . PASS END=16101251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 16101252 . G . PASS END=16101268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,923:0,64,255:27,0 chr1 16101269 . T . PASS END=16101272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16101273 . G . PASS END=16101273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 16101274 . C . PASS END=16101281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1125:0,93,255:31,0 chr1 16101282 . A . PASS END=16101282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 16101283 . C . PASS END=16101284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 16101285 . T . PASS END=16101285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1100:0,52,255:30,0 chr1 16101286 . C . PASS END=16101301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1099:0,83,255:34,0 chr1 16101302 . G . PASS END=16101302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:32,0 chr1 16101303 . G . PASS END=16101365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:34:0,99,1122:0,102,255:40,0 chr1 16101366 . T . PASS END=16101402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,117,1520:0,120,255:40,0 chr1 16101403 . G A, 49.29 PASS DP=44;MQ=241.18;MQRankSum=1.542;ReadPosRankSum=1.188;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:15,12,0:8,7,0:48:84,0,50,670,794,1465:255,0,255:18,0:4.9286e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,7,10,9:12,11,11,8 chr1 16101404 . G . PASS END=16101436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1306:0,93,255:39,0 chr1 16101437 . G . PASS END=16101437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 16101438 . G . PASS END=16101439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 16101440 . G . PASS END=16101440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 16101441 . C . PASS END=16101441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr1 16101442 . G . PASS END=16101453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:34,0 chr1 16101454 . C . PASS END=16101454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:30,0 chr1 16101455 . T . PASS END=16101477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,86,255:30,0 chr1 16101478 . C . PASS END=16101494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 16101495 . C . PASS END=16101497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 16101498 . G . PASS END=16101499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr1 16101500 . T . PASS END=16101500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 16101501 . C . PASS END=16101502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:21,0 chr1 16101503 . G . PASS END=16101526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,44,255:18,0 chr1 16102797 . G . PASS END=16102872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,126,255:40,0 chr1 16103665 . G . PASS END=16103782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:35:0,88,1197:0,88,255:40,0 chr1 16111043 . G . PASS END=16111046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16111047 . G . PASS END=16111047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 16111048 . C . PASS END=16111050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 16111051 . G . PASS END=16111056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16111057 . C . PASS END=16111075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 16111076 . G . PASS END=16111117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1084:0,80,255:32,0 chr1 16111118 . C . PASS END=16111118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 16111119 . C . PASS END=16111125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 16111126 . T . PASS END=16111156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,74,255:25,0 chr1 16133869 . T . PASS END=16133875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,223,255:40,0 chr1 16133876 . A . PASS END=16133949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:80:0,120,1800:0,188,255:40,0 chr1 16133950 . C . PASS END=16133986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:88:0,120,1800:0,254,255:40,0 chr1 16133987 . T C, 50.00 PASS DP=90;MQ=166.55;MQRankSum=-3.300;ReadPosRankSum=4.730;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,47,0:0.528,0.000:89:22,26,0:20,21,0:48:85,0,50,1650,1495,3144:255,0,255:36,0:5.0000e+01,6.6527e-05,5.2749e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,23,25,22:19,23,24,23 chr1 16133988 . A . PASS END=16134071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:77:0,120,1800:0,207,255:40,0 chr1 16134072 . C T, 50.00 PASS DP=80;MQ=211.29;MQRankSum=-1.228;ReadPosRankSum=4.148;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,42,0:0.525,0.000:80:19,23,0:19,19,0:48:85,0,50,1383,1341,2725:255,0,255:36,0:5.0000e+01,6.6010e-05,5.2851e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,18,26,16:17,21,15,27 chr1 16134073 . C . PASS END=16134109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:71:0,120,1800:0,200,255:40,0 chr1 16134110 . T . PASS END=16134144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,156,255:40,0 chr1 16174563 . A . PASS END=16174580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 16174581 . C . PASS END=16174581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 16174582 . A . PASS END=16174582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 16174583 . T . PASS END=16174592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 16174593 . G . PASS END=16174593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 16174594 . G . PASS END=16174617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:16,0 chr1 16174618 . A . PASS END=16174618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 16174619 . A . PASS END=16174622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 16174623 . A . PASS END=16174623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:13,0 chr1 16174624 . A . PASS END=16174631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,558:0,45,255:15,0 chr1 16174632 . G . PASS END=16174639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16174640 . C . PASS END=16174640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 16174641 . A . PASS END=16174642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16174643 . A . PASS END=16174643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,385:0,28,255:13,0 chr1 16174644 . C . PASS END=16174645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 16199311 . A . PASS END=16199312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,848:0,61,255:24,0 chr1 16199313 . A . PASS END=16199313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:23,0 chr1 16199314 . T . PASS END=16199319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 16199320 . C . PASS END=16199325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1057:0,87,255:29,0 chr1 16199326 . A . PASS END=16199326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 16199327 . A . PASS END=16199330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr1 16199331 . T . PASS END=16199331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 16199332 . C . PASS END=16199333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 16199334 . A . PASS END=16199336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 16199337 . T . PASS END=16199337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 16199338 . T . PASS END=16199338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 16199339 . C . PASS END=16199342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 16199343 . C . PASS END=16199343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 16199344 . C . PASS END=16199345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 16199346 . A . PASS END=16199346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:30,0 chr1 16199347 . G . PASS END=16199567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1044:0,83,255:40,0 chr1 16199568 . C . PASS END=16199595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 16199596 . T . PASS END=16199622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 16199623 . A . PASS END=16199631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 16200610 . A . PASS END=16200610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,755:0,38,255:22,0 chr1 16200611 . T . PASS END=16200617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 16200618 . G . PASS END=16200618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 16200619 . G . PASS END=16200621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 16200622 . A . PASS END=16200622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:23,0 chr1 16200623 . A . PASS END=16200626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:24,0 chr1 16200627 . T . PASS END=16200627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:23,0 chr1 16200628 . C . PASS END=16200635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,1030:0,68,255:26,0 chr1 16200636 . C . PASS END=16200656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:85:30:0,85,1125:0,85,255:36,0 chr1 16200657 . C . PASS END=16200657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr1 16200658 . T . PASS END=16200694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,102,1345:0,106,255:40,0 chr1 16200695 . G . PASS END=16200695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:33,0 chr1 16200696 . C . PASS END=16200728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1175:0,94,255:35,0 chr1 16200729 . A . PASS END=16200729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:39:39:0,39,1196:0,39,255:35,3 chr1 16200730 . T . PASS END=16200730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:41:38:0,41,1292:0,41,255:36,1 chr1 16200731 . T . PASS END=16200731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:37,0 chr1 16200732 . T . PASS END=16200821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,89,255:40,0 chr1 16200822 . A . PASS END=16200823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 16200824 . G . PASS END=16200828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16200829 . G . PASS END=16200831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,92,255:26,0 chr1 16200832 . C . PASS END=16200844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 16200845 . C . PASS END=16200859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 16200860 . A . PASS END=16200860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 16200861 . T . PASS END=16200861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:20,0 chr1 16200862 . T . PASS END=16200865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 16200866 . G . PASS END=16200866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:20,0 chr1 16200867 . G . PASS END=16200867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16200868 . T . PASS END=16200869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,737:0,24,255:19,0 chr1 16200870 . G . PASS END=16200870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16200871 . T . PASS END=16200871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16200872 . G . PASS END=16200872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 16200873 . T . PASS END=16200875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 16200876 . C . PASS END=16200876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 16200877 . C . PASS END=16200877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16200878 . A . PASS END=16200878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16200879 . C . PASS END=16200879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr1 16200880 . A . PASS END=16200881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 16200882 . T . PASS END=16200882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr1 16200883 . T . PASS END=16200885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 16200886 . A . PASS END=16200886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 16200887 . A . PASS END=16200889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 16200890 . G . PASS END=16200890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 16202697 . G . PASS END=16202701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,858:0,72,255:26,0 chr1 16202702 . C . PASS END=16202702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 16202703 . A . PASS END=16202710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 16202711 . G . PASS END=16202721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1080:0,84,255:31,0 chr1 16202722 . T . PASS END=16202722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 16202723 . A . PASS END=16202847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:31:0,83,1149:0,83,255:40,0 chr1 16202848 . T . PASS END=16202848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1109:0,50,255:30,0 chr1 16202849 . C . PASS END=16202884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:32:0,88,1152:0,88,255:34,0 chr1 16202885 . A . PASS END=16202885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:30,0 chr1 16202886 . C . PASS END=16202896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:35,0 chr1 16202897 . A . PASS END=16202897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:32,0 chr1 16202898 . A . PASS END=16203069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1252:0,84,255:40,0 chr1 16203070 . A . PASS END=16203070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:28,0 chr1 16203071 . G . PASS END=16203081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1178:0,93,255:31,0 chr1 16203082 . A . PASS END=16203116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 16203117 . A . PASS END=16203117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:19,0 chr1 16203118 . A . PASS END=16203123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 16203124 . T . PASS END=16203173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,630:0,40,255:19,0 chr1 16235816 . C . PASS END=16235832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr1 16235833 . G . PASS END=16235968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,994:0,81,255:40,0 chr1 16235969 . C . PASS END=16235976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:30:0,75,1125:0,90,255:26,0 chr1 16237596 . A . PASS END=16237600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 16237601 . A . PASS END=16237601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16237602 . G . PASS END=16237602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 16237603 . C . PASS END=16237607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 16237608 . A . PASS END=16237609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:28,0 chr1 16237610 . G . PASS END=16237610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 16237611 . A . PASS END=16237613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 16237614 . G . PASS END=16237617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 16237618 . T . PASS END=16237625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:27,0 chr1 16237626 . A . PASS END=16237626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 16237627 . A . PASS END=16237796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:28:0,80,1012:0,80,255:40,0 chr1 16242623 . A . PASS END=16242774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:41:0,110,1447:0,110,255:40,0 chr1 16245421 . G . PASS END=16245546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,119,1598:0,119,255:40,0 chr1 16245899 . C . PASS END=16246012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,119,1629:0,119,255:40,0 chr1 16247365 . G . PASS END=16247478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,111,1474:0,111,255:40,0 chr1 16248744 . G . PASS END=16248771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,115,1800:0,115,255:40,0 chr1 16248772 . T . PASS END=16248844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,168,255:40,0 chr1 16254586 . A . PASS END=16254587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 16254588 . A . PASS END=16254588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,783:0,55,255:22,0 chr1 16254589 . G . PASS END=16254589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16254590 . G . PASS END=16254610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:40,0 chr1 16254611 . T . PASS END=16254611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1366:0,79,255:40,0 chr1 16254612 . A . PASS END=16255075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1105:0,81,255:40,0 chr1 16255076 . C . PASS END=16255076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:28,0 chr1 16255077 . G . PASS END=16255164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1128:0,86,255:40,0 chr1 16255165 . G . PASS END=16255165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1441:0,68,255:37,0 chr1 16255166 . A . PASS END=16255167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 16255168 . G . PASS END=16255204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:40:0,87,1380:0,87,255:40,0 chr1 16255205 . C T, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.635;ReadPosRankSum=2.624;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,30,0:0.638,0.000:47:7,17,0:10,13,0:45:85,0,43,1020,600,1620:255,0,255:16,0:5.0000e+01,1.4212e-04,4.6435e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,25,5:12,5,14,16 chr1 16255206 . G . PASS END=16255242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,113,1509:0,113,255:40,0 chr1 16255243 . A . PASS END=16255403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:45:0,88,1521:0,88,255:40,0 chr1 16255404 . T . PASS END=16255404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:22:46:0,22,1259:0,22,255:31,0 chr1 16255405 . C . PASS END=16255453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1155:0,80,255:38,0 chr1 16255454 . A . PASS END=16255462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,74,255:26,0 chr1 16255463 . T . PASS END=16255463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,840:0,51,255:22,0 chr1 16255464 . C . PASS END=16255481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 16255482 . A . PASS END=16255482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16255483 . A . PASS END=16255483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:26,0 chr1 16255484 . C . PASS END=16255484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16255485 . T . PASS END=16255493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:26,0 chr1 16255494 . C . PASS END=16255494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:22,0 chr1 16255495 . T . PASS END=16255521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,922:0,72,255:25,0 chr1 16255522 . G . PASS END=16255523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16255524 . C . PASS END=16255535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,1000:0,78,255:26,0 chr1 16255536 . C . PASS END=16255550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,897:0,81,255:28,0 chr1 16255551 . T . PASS END=16255557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16255558 . G . PASS END=16255575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1103:0,87,255:30,0 chr1 16255576 . C . PASS END=16255577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 16255578 . A . PASS END=16255620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1227:0,92,255:38,0 chr1 16255621 . G . PASS END=16255621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:33,0 chr1 16255622 . C . PASS END=16255684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,108,1537:0,113,255:40,0 chr1 16255685 . A . PASS END=16255685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1615:0,72,255:40,0 chr1 16255686 . G . PASS END=16255799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1158:0,96,255:40,0 chr1 16255800 . T . PASS END=16255802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:26,0 chr1 16255803 . C . PASS END=16255814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,95,255:31,0 chr1 16255815 . T . PASS END=16255837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,826:0,71,255:26,0 chr1 16255838 . G . PASS END=16255838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:24,0 chr1 16255839 . C . PASS END=16255842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 16255843 . A . PASS END=16255844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16255845 . G . PASS END=16255845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 16255846 . A . PASS END=16255854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 16255855 . G . PASS END=16255881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 16255882 . T . PASS END=16255882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 16255883 . A . PASS END=16255891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:24,0 chr1 16255892 . A . PASS END=16255892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 16255893 . A . PASS END=16255895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16255896 . T . PASS END=16255896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 16255897 . G . PASS END=16255899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 16255900 . C . PASS END=16255901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:22,0 chr1 16255902 . G . PASS END=16255908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,958:0,73,255:26,0 chr1 16255909 . T . PASS END=16255912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,956:0,81,255:27,0 chr1 16255913 . G . PASS END=16255913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 16255914 . T . PASS END=16255925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1025:0,80,255:31,0 chr1 16255926 . A . PASS END=16255926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 16255927 . A . PASS END=16255930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 16255931 . T . PASS END=16255931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 16255932 . G . PASS END=16255945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1210:0,86,255:32,0 chr1 16255946 . A . PASS END=16255947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:28,0 chr1 16255948 . T . PASS END=16255969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1127:0,83,255:35,0 chr1 16255970 . A . PASS END=16255975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,102,1530:0,105,255:36,0 chr1 16255976 . A . PASS END=16255976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:33,0 chr1 16255977 . G . PASS END=16256006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:38:0,97,1289:0,97,255:39,0 chr1 16256007 . T C, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.239;ReadPosRankSum=2.070;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,23,0:0.590,0.000:39:8,11,0:8,12,0:47:85,0,47,795,544,1339:255,0,255:15,0:5.0000e+01,8.6201e-05,5.0073e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,3,7,16:5,11,9,14 chr1 16256008 . A . PASS END=16256044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,107,1482:0,107,255:40,0 chr1 16256045 . A . PASS END=16257862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:33:0,82,1172:0,82,255:40,0 chr1 16257863 . A . PASS END=16257863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 16257864 . A . PASS END=16257931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1017:0,81,255:34,0 chr1 16257932 . G . PASS END=16257950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1116:0,77,255:26,0 chr1 16257951 . G . PASS END=16257965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,950:0,84,255:28,0 chr1 16257966 . A . PASS END=16257978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 16257979 . C . PASS END=16257989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 16257990 . A . PASS END=16257995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,925:0,67,255:26,0 chr1 16257996 . A . PASS END=16257998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16257999 . G . PASS END=16258000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 16258001 . A . PASS END=16258004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 16258005 . A . PASS END=16258005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16258006 . G . PASS END=16258008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16258009 . A . PASS END=16258010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 16258011 . T . PASS END=16258012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 16258013 . T . PASS END=16258013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 16258014 . C . PASS END=16258025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 16258026 . A . PASS END=16258034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,71,255:25,0 chr1 16258035 . A . PASS END=16258035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:21,0 chr1 16258036 . G . PASS END=16258063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,876:0,61,255:26,0 chr1 16258064 . C . PASS END=16258065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 16258066 . A . PASS END=16258066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr1 16258067 . G . PASS END=16258068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16258069 . C . PASS END=16258077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,925:0,67,255:26,0 chr1 16258078 . A . PASS END=16258078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 16258079 . G . PASS END=16258080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 16258081 . T . PASS END=16258083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 16258084 . T . PASS END=16258084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 16258085 . G . PASS END=16258085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 16258086 . A . PASS END=16258086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 16258087 . G . PASS END=16258094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr1 16258095 . C . PASS END=16258095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 16258096 . A . PASS END=16258097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 16258098 . A . PASS END=16258098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,819:0,75,255:28,0 chr1 16258099 . C . PASS END=16258102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 16258103 . A . PASS END=16258103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:26,0 chr1 16258104 . A . PASS END=16258112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 16258113 . C . PASS END=16258113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 16258114 . T . PASS END=16258114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16258115 . G . PASS END=16258144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 16258145 . G . PASS END=16258150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 16258151 . G . PASS END=16258167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:25:0,61,892:0,61,255:25,0 chr1 16258168 . T . PASS END=16258168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,833:0,44,255:22,0 chr1 16258169 . G . PASS END=16258175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 16258176 . A . PASS END=16258176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 16258177 . G . PASS END=16258179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,907:0,64,255:26,0 chr1 16258180 . T . PASS END=16258181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 16258182 . A . PASS END=16258210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,917:0,67,255:26,0 chr1 16258211 . A . PASS END=16258211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,868:0,51,255:22,0 chr1 16258212 . C . PASS END=16258252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:25,0 chr1 16258253 . G . PASS END=16258264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 16258265 . A . PASS END=16258265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 16258266 . G . PASS END=16258329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1150:0,85,255:37,0 chr1 16258330 . T . PASS END=16258330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:34,0 chr1 16258331 . T . PASS END=16258337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:36,0 chr1 16258338 . T . PASS END=16258338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:33,0 chr1 16258339 . G . PASS END=16258461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1238:0,81,255:39,0 chr1 16258462 . A . PASS END=16258464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr1 16258465 . C . PASS END=16258475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:27,0 chr1 16258476 . A . PASS END=16258482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 16258483 . C . PASS END=16258485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16258486 . C . PASS END=16258486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 16258487 . T . PASS END=16258488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 16258489 . T . PASS END=16258496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 16258497 . A . PASS END=16258497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:23,0 chr1 16258498 . A . PASS END=16258501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:24,0 chr1 16258502 . C . PASS END=16258503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 16258504 . C . PASS END=16258517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 16258518 . G . PASS END=16258520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 16258521 . T . PASS END=16258536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,832:0,61,255:25,0 chr1 16258537 . G . PASS END=16258537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,786:0,41,255:20,0 chr1 16258538 . G . PASS END=16258542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 16258543 . A . PASS END=16258543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 16258544 . G . PASS END=16258550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 16258551 . A . PASS END=16258551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 16258552 . G . PASS END=16258554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 16258555 . G . PASS END=16258555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 16258556 . G . PASS END=16258564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 16258565 . G . PASS END=16258569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 16258570 . C . PASS END=16258585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,738:0,63,255:22,0 chr1 16258586 . G . PASS END=16258589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:20,0 chr1 16258590 . G . PASS END=16258596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 16258597 . A . PASS END=16258597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 16258598 . A . PASS END=16258598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 16258599 . A . PASS END=16258599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr1 16258600 . G . PASS END=16258600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 16258601 . A . PASS END=16258601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 16258602 . C . PASS END=16258604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,864:0,69,255:25,0 chr1 16258605 . G . PASS END=16258605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 16258606 . C . PASS END=16258640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr1 16258641 . A . PASS END=16258641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 16258642 . G . PASS END=16258642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 16258643 . G . PASS END=16258643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 16258644 . A . PASS END=16258653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,838:0,72,255:25,0 chr1 16258654 . A . PASS END=16258654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 16258655 . A . PASS END=16258704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,878:0,62,255:26,0 chr1 16258705 . A . PASS END=16258707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 16258708 . T . PASS END=16258726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr1 16258727 . A . PASS END=16258727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 16258728 . A . PASS END=16258732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,845:0,69,255:23,0 chr1 16258733 . G . PASS END=16258733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:20,0 chr1 16258734 . G . PASS END=16258752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 16258753 . G . PASS END=16258754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 16258755 . A . PASS END=16258767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:23,0 chr1 16258768 . T . PASS END=16258768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 16258769 . G . PASS END=16258782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,62,255:26,0 chr1 16258783 . G . PASS END=16258784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16258785 . T . PASS END=16258790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 16258791 . C . PASS END=16258791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 16258792 . C . PASS END=16258793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 16258794 . A . PASS END=16258795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16258796 . A . PASS END=16258796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 16258797 . T . PASS END=16258800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16258801 . C . PASS END=16258801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 16258802 . G . PASS END=16258802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 16258803 . T . PASS END=16258803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 16258804 . G . PASS END=16258804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 16258805 . A . PASS END=16258814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 16258815 . C . PASS END=16258981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1124:0,81,255:40,0 chr1 16258982 . T . PASS END=16258982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:47:39:0,47,1260:0,47,255:33,0 chr1 16258983 . C . PASS END=16259049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1250:0,81,255:36,0 chr1 16259050 . T . PASS END=16259050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16259051 . G . PASS END=16259068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1260:0,98,255:34,0 chr1 16259069 . A . PASS END=16259069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1151:0,75,255:28,0 chr1 16259070 . G . PASS END=16259076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1239:0,89,255:34,0 chr1 16259077 . T . PASS END=16259077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:34,2 chr1 16259078 . G . PASS END=16259078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1205:0,42,255:34,2 chr1 16259079 . G . PASS END=16259079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:36,0 chr1 16259080 . G . PASS END=16259196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1173:0,81,255:38,0 chr1 16259197 . T . PASS END=16259207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,80,255:22,0 chr1 16259208 . C . PASS END=16259226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,60,255:19,0 chr1 16259227 . G . PASS END=16259227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:16,0 chr1 16259228 . T . PASS END=16259254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:17,0 chr1 16259255 . G . PASS END=16259255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 16259256 . C . PASS END=16259261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,599:0,48,255:17,0 chr1 16259262 . A . PASS END=16259262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 16259263 . A . PASS END=16259273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 16259274 . A . PASS END=16259274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:13,0 chr1 16259275 . G . PASS END=16259287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 16259288 . T . PASS END=16259298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 16259299 . T . PASS END=16259299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 16259300 . G . PASS END=16259316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 16259317 . A . PASS END=16259317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 16259318 . C . PASS END=16259327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 16259328 . T . PASS END=16259328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16259329 . T . PASS END=16259341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 16259342 . A . PASS END=16259343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 16259344 . G . PASS END=16259407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,568:0,40,255:19,0 chr1 16259408 . G . PASS END=16259408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 16259409 . A . PASS END=16259411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr1 16259412 . T . PASS END=16259435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:23,0 chr1 16259436 . C . PASS END=16259436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 16259437 . A . PASS END=16259519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,839:0,65,255:26,0 chr1 16259520 . G . PASS END=16259520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16259521 . A . PASS END=16259523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16259524 . G . PASS END=16259527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16259528 . A . PASS END=16259528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,942:0,56,255:26,0 chr1 16259529 . C . PASS END=16259529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16259530 . A . PASS END=16259530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 16259531 . G . PASS END=16259532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 16259533 . T . PASS END=16259533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:28,0 chr1 16259534 . G . PASS END=16259534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 16259535 . A . PASS END=16259541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1080:0,90,255:31,0 chr1 16259542 . A . PASS END=16259542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 16259543 . T . PASS END=16259775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:32:0,85,1158:0,85,255:40,0 chr1 16259776 . A . PASS END=16259812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:37:0,99,1485:0,111,255:40,0 chr1 16259813 . A G, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.181;ReadPosRankSum=4.148;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,19,0:0.514,0.000:37:10,9,0:8,10,0:48:85,0,50,643,644,1287:255,0,255:18,0:5.0000e+01,6.5492e-05,5.2965e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,5,14:12,6,11,8 chr1 16259814 . A . PASS END=16259850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1394:0,97,255:38,0 chr1 16259851 . G . PASS END=16259899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1141:0,80,255:37,0 chr1 16259900 . A . PASS END=16259900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1236:0,62,255:34,0 chr1 16259901 . A . PASS END=16260012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:35:0,95,1371:0,95,255:40,0 chr1 16260013 . T . PASS END=16260013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:31,0 chr1 16260014 . G . PASS END=16260015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1172:0,83,255:33,0 chr1 16260016 . G . PASS END=16260033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:62:26:0,62,914:0,62,255:26,0 chr1 16260034 . A . PASS END=16260035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,855:0,58,255:19,0 chr1 16260036 . C . PASS END=16260050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 16260051 . C . PASS END=16260053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 16260054 . T . PASS END=16260056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:21,0 chr1 16260057 . A . PASS END=16260058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 16260059 . G . PASS END=16260069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 16260070 . A . PASS END=16260070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 16260071 . G . PASS END=16260084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 16260085 . G . PASS END=16260085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16260086 . C . PASS END=16260086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 16260087 . A . PASS END=16260090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16260091 . C . PASS END=16260091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 16260092 . A . PASS END=16260098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 16260099 . A . PASS END=16260099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 16260100 . A . PASS END=16260100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 16260101 . A . PASS END=16260137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,870:0,72,255:26,0 chr1 16260138 . C . PASS END=16260156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:19:0,57,714:0,57,255:19,0 chr1 16260157 . T . PASS END=16260157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,643:0,26,255:18,0 chr1 16260158 . G . PASS END=16260181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,657:0,41,255:19,0 chr1 16260182 . C . PASS END=16260182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:15,0 chr1 16260183 . C . PASS END=16260209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:19,0 chr1 16260210 . A . PASS END=16260214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 16260215 . C . PASS END=16260226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,751:0,47,255:19,0 chr1 16260227 . G . PASS END=16260229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16260230 . A . PASS END=16260230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 16260231 . C . PASS END=16260255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:26,0 chr1 16260256 . G . PASS END=16260260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 16260261 . G . PASS END=16260261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16260262 . G . PASS END=16260351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1210:0,86,255:35,0 chr1 16260352 . G . PASS END=16260352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:29,0 chr1 16260353 . G . PASS END=16260391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:32,0 chr1 16260392 . A . PASS END=16260392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16260393 . G . PASS END=16260394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr1 16260395 . G . PASS END=16260399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16260400 . C . PASS END=16260400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 16260401 . A . PASS END=16260404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:23,0 chr1 16260405 . C . PASS END=16260407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,71,255:19,0 chr1 16260408 . T . PASS END=16260409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 16260410 . G . PASS END=16260418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:50:22:0,50,765:0,50,255:19,0 chr1 16260419 . G . PASS END=16260419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16260420 . T . PASS END=16260427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,56,255:19,0 chr1 16260428 . G . PASS END=16260432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 16260433 . T . PASS END=16260434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16260435 . G . PASS END=16260437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16260438 . T . PASS END=16260439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16260440 . C . PASS END=16260441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16260442 . T . PASS END=16260442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:18,0 chr1 16260443 . G . PASS END=16260449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 16260450 . C . PASS END=16260450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 16260451 . G . PASS END=16260459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,754:0,60,255:23,0 chr1 16260460 . A . PASS END=16260460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 16260461 . G . PASS END=16260461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr1 16260462 . T . PASS END=16260462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,617:0,35,255:21,0 chr1 16260463 . T . PASS END=16260478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,779:0,69,255:24,0 chr1 16260479 . T . PASS END=16260479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:23,0 chr1 16260480 . T . PASS END=16260510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,880:0,65,255:25,0 chr1 16260511 . C . PASS END=16260511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 16260512 . A . PASS END=16260527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr1 16260528 . C . PASS END=16260532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16260533 . G . PASS END=16260533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 16260534 . A . PASS END=16260535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:30:0,30,1006:0,30,255:28,2 chr1 16260536 . G . PASS END=16260536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr1 16260537 . T . PASS END=16260578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1164:0,83,255:33,0 chr1 16260579 . C . PASS END=16260579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 16260580 . T . PASS END=16260581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr1 16260582 . C . PASS END=16260582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 16260583 . C . PASS END=16260614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1155:0,80,255:32,0 chr1 16260615 . T . PASS END=16260673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,939:0,75,255:26,0 chr1 16260674 . C . PASS END=16260674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:21,0 chr1 16260675 . T . PASS END=16260690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 16260691 . C . PASS END=16260694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 16260695 . C . PASS END=16260696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16260697 . C . PASS END=16260702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 16260703 . C . PASS END=16260712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 16260713 . G . PASS END=16260713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 16260714 . T . PASS END=16260720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16260721 . G . PASS END=16260721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 16260722 . G . PASS END=16260729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 16260730 . G . PASS END=16260736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 16260737 . C . PASS END=16260742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16260743 . G . PASS END=16260799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:19,0 chr1 16260800 . C . PASS END=16260852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,663:0,60,255:24,0 chr1 16260853 . T . PASS END=16260853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 16260854 . C . PASS END=16260866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr1 16260867 . T . PASS END=16260875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 16260876 . C . PASS END=16260888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 16260889 . G . PASS END=16260899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:30,0 chr1 16260900 . C . PASS END=16260900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 16260901 . A . PASS END=16260906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 16260907 . A . PASS END=16260907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 16260908 . G . PASS END=16260924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr1 16260925 . T . PASS END=16260925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:25,0 chr1 16260926 . G . PASS END=16260971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 16260972 . T . PASS END=16260972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:23,0 chr1 16260973 . T . PASS END=16261011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:26,0 chr1 16261012 . G . PASS END=16261012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 16261013 . G . PASS END=16261020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,984:0,65,255:24,0 chr1 16261021 . G . PASS END=16261021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 16261022 . G . PASS END=16261035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,937:0,65,255:26,0 chr1 16261036 . T . PASS END=16261037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16261038 . C . PASS END=16261043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 16261044 . C . PASS END=16261044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16261045 . A . PASS END=16261048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:27,0 chr1 16261049 . A . PASS END=16261049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16261050 . A . PASS END=16261050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,910:0,70,255:26,0 chr1 16261051 . G . PASS END=16261052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 16261053 . G . PASS END=16261053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 16261054 . C . PASS END=16261059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 16261060 . G . PASS END=16261060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 16261061 . A . PASS END=16261090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,964:0,81,255:29,0 chr1 16261091 . C . PASS END=16261103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,933:0,65,255:26,0 chr1 16261104 . T . PASS END=16261104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,886:0,50,255:21,0 chr1 16261105 . G . PASS END=16261133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 16261134 . C . PASS END=16261135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 16261136 . G . PASS END=16261155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:23,0 chr1 16261156 . T . PASS END=16261156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 16261157 . G . PASS END=16261186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 16261187 . A . PASS END=16261189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,837:0,33,255:23,0 chr1 16261190 . T . PASS END=16261202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 16261203 . A . PASS END=16261204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 16261205 . A . PASS END=16261209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16261210 . A . PASS END=16261212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 16261213 . C . PASS END=16261302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:25,0 chr1 16261303 . C . PASS END=16261313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 16261314 . C . PASS END=16261316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16261317 . T . PASS END=16261319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16261320 . C . PASS END=16261331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 16261332 . C . PASS END=16261336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 16261337 . T . PASS END=16261354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,861:0,66,255:25,0 chr1 16261355 . C . PASS END=16261358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16261359 . C . PASS END=16261392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,826:0,62,255:25,0 chr1 16261393 . G . PASS END=16261393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:22,0 chr1 16261394 . G . PASS END=16261397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr1 16261398 . T . PASS END=16261398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:24,0 chr1 16261399 . G . PASS END=16261413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,848:0,61,255:25,0 chr1 16261414 . T . PASS END=16261414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr1 16261415 . A . PASS END=16261425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:23,0 chr1 16261426 . T . PASS END=16261426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 16261427 . G . PASS END=16261430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr1 16261431 . T . PASS END=16261431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 16261432 . T . PASS END=16261438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,742:0,69,255:23,0 chr1 16261439 . G . PASS END=16261439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,821:0,33,255:21,0 chr1 16261440 . T . PASS END=16261450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 16261451 . A . PASS END=16261452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 16261453 . G . PASS END=16261479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,856:0,61,255:26,0 chr1 16261480 . T . PASS END=16261480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 16261481 . C . PASS END=16261502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 16261503 . T . PASS END=16261503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 16261504 . C . PASS END=16261504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16261505 . A . PASS END=16261505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 16261506 . C . PASS END=16261516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 16261517 . A . PASS END=16261517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 16261518 . C . PASS END=16261518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 16261519 . A . PASS END=16261519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 16261520 . G . PASS END=16261532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 16261533 . C . PASS END=16261533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 16261534 . C . PASS END=16261537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 16261538 . G . PASS END=16261544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 16261545 . A . PASS END=16261548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 16261549 . A . PASS END=16261555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 16261556 . G . PASS END=16261556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16261557 . T . PASS END=16261557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 16261558 . G . PASS END=16261559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16261560 . T . PASS END=16261585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 16261586 . C . PASS END=16261589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 16261590 . G . PASS END=16261606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,440:0,47,255:17,0 chr1 16261607 . A . PASS END=16261607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 16261608 . A . PASS END=16261610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,538:0,51,255:17,0 chr1 16261611 . A . PASS END=16261611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 16261612 . G . PASS END=16261625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 16261626 . T . PASS END=16261626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 16261627 . C . PASS END=16261652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,615:0,41,255:19,0 chr1 16261653 . T . PASS END=16261653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 16261654 . T . PASS END=16261660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16261661 . G . PASS END=16261671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,725:0,60,255:21,0 chr1 16261672 . G . PASS END=16261672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 16261673 . T . PASS END=16261675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 16261676 . A . PASS END=16261676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 16261677 . C . PASS END=16261677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16261678 . G . PASS END=16261678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 16261679 . C . PASS END=16261679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16261680 . T . PASS END=16261694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 16261695 . C . PASS END=16261713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1169:0,80,255:30,0 chr1 16261714 . A . PASS END=16261714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,874:0,73,255:29,0 chr1 16261715 . C . PASS END=16261832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1210:0,85,255:39,0 chr1 16261833 . C . PASS END=16261834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1066:0,69,255:31,0 chr1 16261835 . T . PASS END=16261882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1125:0,82,255:35,0 chr1 16261883 . C . PASS END=16261883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 16261884 . T . PASS END=16261885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 16261886 . T . PASS END=16261962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:26,0 chr1 16261963 . T . PASS END=16261973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,782:0,50,255:19,0 chr1 16261974 . C . PASS END=16262010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:25,0 chr1 16262011 . C . PASS END=16262011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 16262012 . C . PASS END=16262013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 16262014 . C . PASS END=16262029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1047:0,81,255:30,0 chr1 16262030 . A . PASS END=16262030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1036:0,74,255:28,0 chr1 16262031 . G . PASS END=16262031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 16262032 . A . PASS END=16262032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 16262033 . A . PASS END=16262043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 16262044 . C . PASS END=16262044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 16262045 . A . PASS END=16262056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 16262057 . A . PASS END=16262059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16262060 . A . PASS END=16262070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 16262071 . C . PASS END=16262074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 16262075 . C . PASS END=16262077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16262078 . G . PASS END=16262132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,869:0,62,255:26,0 chr1 16262133 . C . PASS END=16262133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:22,0 chr1 16262134 . C . PASS END=16262170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,892:0,61,255:25,0 chr1 16262171 . G . PASS END=16262171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:19,0 chr1 16262172 . G . PASS END=16262172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16262173 . T . PASS END=16262174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 16262175 . T . PASS END=16262185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:20,0 chr1 16262186 . G . PASS END=16262189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16262190 . C . PASS END=16262191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16262192 . C . PASS END=16262192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 16262193 . A . PASS END=16262206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 16262207 . G . PASS END=16262207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 16262208 . A . PASS END=16262212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 16262213 . G . PASS END=16262213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16262214 . T . PASS END=16262258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,829:0,66,255:23,0 chr1 16262259 . C . PASS END=16262259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 16262260 . A . PASS END=16262280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 16262281 . T . PASS END=16262282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 16262283 . A . PASS END=16262292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr1 16262293 . G . PASS END=16262295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 16262296 . C . PASS END=16262297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16262298 . C . PASS END=16262302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:28,0 chr1 16262303 . A . PASS END=16262303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1172:0,71,255:27,0 chr1 16262304 . C . PASS END=16262342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1119:0,87,255:32,0 chr1 16262343 . T . PASS END=16262343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 16262344 . G . PASS END=16262357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1141:0,90,255:31,0 chr1 16262358 . A . PASS END=16262366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 16262367 . G . PASS END=16262371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:29,0 chr1 16262372 . G . PASS END=16262372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 16262373 . C . PASS END=16262387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 16262388 . A . PASS END=16262388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 16262389 . G . PASS END=16262391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 16262392 . G . PASS END=16262392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 16262393 . C . PASS END=16262402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 16262403 . G . PASS END=16262404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16262405 . A . PASS END=16262415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 16262416 . G . PASS END=16262419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 16262420 . C . PASS END=16262424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 16262425 . G . PASS END=16262428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:27,0 chr1 16262429 . G . PASS END=16262430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16262431 . A . PASS END=16262431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 16262432 . G . PASS END=16262458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr1 16262459 . G . PASS END=16262459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 16262460 . C . PASS END=16262460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:18,0 chr1 16262461 . C . PASS END=16262461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 16262462 . C . PASS END=16262462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:19,0 chr1 16262463 . C . PASS END=16262464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 16262465 . A . LowGQ END=16262465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,657:8,0,255:18,0 chr1 16262466 . C . PASS END=16262467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,786:0,55,255:19,0 chr1 16262468 . C . PASS END=16262468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:17,0 chr1 16262469 . C . PASS END=16262469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 16262470 . C . PASS END=16262470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:17,0 chr1 16262471 . A . LowGQ END=16262471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,496:58,0,255:16,0 chr1 16262472 . C . PASS END=16262475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,767:0,50,255:19,0 chr1 16262476 . T . PASS END=16262476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,712:0,5,255:18,0 chr1 16262477 . G . PASS END=16262477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,664:0,38,255:18,0 chr1 16262478 . C . PASS END=16262478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 16262479 . C . PASS END=16262481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 16262482 . C . PASS END=16262482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 16262483 . G . LowGQ END=16262483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,549:36,0,255:17,0 chr1 16262484 . T . PASS END=16262484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:20,0 chr1 16262485 . C . PASS END=16262486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 16262487 . C . PASS END=16262487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16262488 . T . PASS END=16262488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:20,0 chr1 16262489 . G . PASS END=16262491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:22,0 chr1 16262492 . C . PASS END=16262492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 16262493 . C . PASS END=16262493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr1 16262494 . T . PASS END=16262494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,784:0,20,255:21,0 chr1 16262495 . G . PASS END=16262497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,792:0,42,255:21,0 chr1 16262498 . C . PASS END=16262501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 16262502 . T . PASS END=16262502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,690:0,3,255:21,0 chr1 16262503 . T . PASS END=16262505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:24:0,42,770:0,42,255:22,0 chr1 16262506 . T . PASS END=16262506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:22,0 chr1 16262507 . G . PASS END=16262508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,742:0,41,255:22,0 chr1 16262509 . C . PASS END=16262509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16262510 . C . PASS END=16262510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:19,0 chr1 16262511 . C . PASS END=16262511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16262512 . T . PASS END=16262512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,698:0,22,255:19,0 chr1 16262513 . G . PASS END=16262513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr1 16262514 . C . PASS END=16262515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:23,0 chr1 16262516 . C . PASS END=16262516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:23,0 chr1 16262517 . C . PASS END=16262520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:25,0 chr1 16262521 . C . PASS END=16262523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 16262524 . T . PASS END=16262524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,927:0,53,255:25,0 chr1 16262525 . C . PASS END=16262526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16262527 . T . PASS END=16262527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:25,0 chr1 16262528 . G . PASS END=16262531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 16262532 . A . PASS END=16262532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr1 16262533 . G . PASS END=16262546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:24,0 chr1 16262547 . C . PASS END=16262547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:21,0 chr1 16262548 . A . PASS END=16262551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:23,0 chr1 16262552 . A . PASS END=16262553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 16262554 . C . PASS END=16262567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:26,0 chr1 16262568 . T . PASS END=16262568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 16262569 . C . PASS END=16262571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 16262572 . G . PASS END=16262572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr1 16262573 . G . PASS END=16262578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:25:0,71,955:0,71,255:27,0 chr1 16262579 . C . PASS END=16262580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16262581 . T . PASS END=16262589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,994:0,70,255:26,0 chr1 16262590 . T . PASS END=16262590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:25,0 chr1 16262591 . C . PASS END=16262596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,970:0,67,255:26,0 chr1 16262597 . G . PASS END=16262597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16262598 . T . PASS END=16262598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 16262599 . G . PASS END=16262602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 16262603 . A . PASS END=16262603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 16262604 . C . PASS END=16262623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1033:0,87,255:29,0 chr1 16262624 . C . PASS END=16262625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 16262626 . C . PASS END=16262627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 16262628 . C . PASS END=16262630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 16262631 . G . PASS END=16262639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 16262640 . T . PASS END=16262640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16262641 . G . PASS END=16262641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16262642 . T . PASS END=16262642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr1 16262643 . T . PASS END=16262653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:28,0 chr1 16262654 . C . PASS END=16262664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 16262665 . C . PASS END=16262726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1235:0,86,255:36,0 chr1 16262727 . T . PASS END=16262727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1105:0,63,255:29,0 chr1 16262728 . T . PASS END=16262732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 16262733 . T . PASS END=16262733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 16262734 . G . PASS END=16262738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr1 16262739 . C . PASS END=16262739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 16262740 . C . PASS END=16262751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1161:0,80,255:29,0 chr1 16262752 . A . PASS END=16262761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 16263658 . G . PASS END=16263660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:17,0 chr1 16263661 . C . PASS END=16263661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 16263662 . C . PASS END=16263671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,619:0,51,255:19,0 chr1 16263672 . A . PASS END=16263675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 16263676 . G . PASS END=16263681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,729:0,47,255:19,0 chr1 16263682 . C . PASS END=16263695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:23,0 chr1 16263696 . G . PASS END=16263696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 16263697 . C . PASS END=16263704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 16263705 . G . PASS END=16263910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1145:0,80,255:40,0 chr1 16263911 . G . PASS END=16263911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr1 16263912 . C . PASS END=16263916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:31:0,82,1044:0,82,255:30,0 chr1 16263917 . C . PASS END=16263917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,994:0,49,255:28,0 chr1 16263918 . T . PASS END=16263932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1085:0,80,255:33,0 chr1 16263933 . T . PASS END=16263933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:31,0 chr1 16263934 . G . PASS END=16263953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:30,0 chr1 16263954 . T . PASS END=16263956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16263957 . C . PASS END=16263961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16263962 . C . PASS END=16263983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 16263984 . T . PASS END=16263984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 16263985 . G . PASS END=16264005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,885:0,78,255:26,0 chr1 16264006 . G . PASS END=16264006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 16264007 . T . PASS END=16264014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,970:0,68,255:27,0 chr1 16264015 . A . PASS END=16264020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 16264021 . G . PASS END=16264023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 16264024 . C . PASS END=16264024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:24,0 chr1 16264025 . C . PASS END=16264045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1015:0,71,255:26,0 chr1 16264046 . T . PASS END=16264052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:30,0 chr1 16264053 . A . PASS END=16264053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr1 16264054 . C . PASS END=16264068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1109:0,90,255:30,0 chr1 16264069 . C . PASS END=16264073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 16264074 . C . PASS END=16264075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16264076 . C . PASS END=16264079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16264080 . A . PASS END=16264085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16264086 . T . PASS END=16264102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 16264103 . C . PASS END=16264103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16264104 . T . PASS END=16264112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 16264113 . A . PASS END=16264113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:23,0 chr1 16264114 . C . PASS END=16264139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:26,0 chr1 16264140 . G . PASS END=16264140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 16264307 . A . PASS END=16264314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 16264315 . C . PASS END=16264315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:27,0 chr1 16264316 . A . PASS END=16264316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 16264317 . T . PASS END=16264478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1163:0,80,255:40,0 chr1 16264479 . A . PASS END=16264496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:27,0 chr1 16264497 . T . PASS END=16264501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:24:0,47,720:0,47,255:17,0 chr1 16265213 . G . PASS END=16265220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 16265221 . A . PASS END=16265244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:19,0 chr1 16265245 . G . PASS END=16265260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:23,0 chr1 16265261 . C . PASS END=16265262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 16265263 . A . PASS END=16265274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:26,0 chr1 16265275 . G . PASS END=16265285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 16265286 . A . PASS END=16265289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 16265290 . C . PASS END=16265299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 16265300 . G . PASS END=16265301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16265302 . C . PASS END=16265303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16265304 . T . PASS END=16265308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 16265309 . A . PASS END=16265311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 16265312 . T . PASS END=16265313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16265314 . C . PASS END=16265314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16265315 . C . PASS END=16265319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1092:0,74,255:25,0 chr1 16265320 . G . PASS END=16265338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 16265339 . A . PASS END=16265343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 16265344 . C . PASS END=16265345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16265346 . A . PASS END=16265346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,864:0,54,255:25,0 chr1 16265347 . C . PASS END=16265353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 16265354 . A . PASS END=16265355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16265356 . C . PASS END=16265356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16265357 . C . PASS END=16265357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 16265358 . C . PASS END=16265361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16265362 . C . PASS END=16265371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr1 16265791 . C . PASS END=16265896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,110,1759:0,110,255:40,0 chr1 16265897 . T . PASS END=16265897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:65:53:0,65,1768:0,65,255:40,0 chr1 16265898 . C . PASS END=16265922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:47:0,95,1693:0,95,255:40,0 chr1 16268464 . T . PASS END=16268482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:9,0 chr1 16268483 . C . PASS END=16268483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 16268484 . A . LowGQ END=16268484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:9,0 chr1 16268485 . T . PASS END=16268485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 16268486 . T . PASS END=16268486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 16268487 . C . PASS END=16268490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 16268491 . A . PASS END=16268497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16268498 . G . PASS END=16268513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,390:0,33,255:12,0 chr1 16268514 . G . PASS END=16268516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 16268517 . C . PASS END=16268517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 16268518 . G . PASS END=16268543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:19,0 chr1 16268544 . G . PASS END=16268590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,751:0,60,255:23,0 chr1 16268591 . G . PASS END=16268591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 16268592 . T . PASS END=16268592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 16268593 . G . PASS END=16268650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,731:0,63,255:24,0 chr1 16268651 . T . PASS END=16268651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 16268652 . G . PASS END=16268653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16268654 . G . PASS END=16268656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,855:0,56,255:19,0 chr1 16268657 . G . PASS END=16268658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16268659 . G . PASS END=16268665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:23:0,56,845:0,56,255:20,0 chr1 16268666 . C . PASS END=16268699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,786:0,66,255:23,0 chr1 16268700 . A . PASS END=16268700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 16268701 . C . PASS END=16268702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16268703 . T . PASS END=16268703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 16268704 . G . PASS END=16268705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16268706 . C . PASS END=16268706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 16268707 . C . PASS END=16268709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 16268710 . A . PASS END=16268710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 16268711 . C . PASS END=16268711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 16268712 . A . PASS END=16268712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 16268713 . G . PASS END=16268719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 16268720 . C . PASS END=16268721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,53,255:17,0 chr1 16268722 . G . PASS END=16268736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:22,0 chr1 16268737 . A . PASS END=16268747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:18,0 chr1 16268826 . C . PASS END=16268830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:18,0 chr1 16268831 . T . PASS END=16268831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr1 16268832 . C . PASS END=16268834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 16268835 . G . PASS END=16268835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 16268836 . C . PASS END=16268841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 16268842 . C . PASS END=16268842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 16268843 . T . PASS END=16268843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 16268844 . T . PASS END=16268846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 16268847 . C . PASS END=16268848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 16268849 . G . PASS END=16268860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 16268861 . T . PASS END=16268869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:21,0 chr1 16268870 . A . PASS END=16268870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:17,0 chr1 16268871 . G . PASS END=16268871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 16268872 . G . PASS END=16268872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16268873 . A . PASS END=16268873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 16268874 . C . PASS END=16268879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 16268880 . T . PASS END=16268881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,744:0,52,255:23,0 chr1 16268882 . T . PASS END=16268907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,811:0,62,255:25,0 chr1 16268908 . C . PASS END=16268908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 16268909 . G . PASS END=16268911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 16268912 . A . PASS END=16268936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 16269024 . C . PASS END=16269041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr1 16269042 . C . PASS END=16269042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 16269043 . T . PASS END=16269058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 16269059 . T . PASS END=16269067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 16269068 . A . PASS END=16269068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 16269069 . G . PASS END=16269089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,853:0,69,255:26,0 chr1 16269090 . T . PASS END=16269090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 16269091 . G . PASS END=16269094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 16269095 . A . PASS END=16269152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1072:0,83,255:37,0 chr1 16269153 . G . PASS END=16269153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:35,0 chr1 16269154 . C . PASS END=16269224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:32:0,81,1215:0,85,255:40,0 chr1 16269225 . G . PASS END=16269225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:25,0 chr1 16269226 . C . PASS END=16269227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 16269228 . T . PASS END=16269233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,915:0,67,255:26,0 chr1 16269559 . C . PASS END=16269560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 16269561 . G . PASS END=16269646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,986:0,80,255:37,0 chr1 16269647 . G . PASS END=16269648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16269649 . G . PASS END=16269652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 16269653 . G . PASS END=16269659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 16269660 . T . PASS END=16269660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:25,0 chr1 16269661 . G . PASS END=16269661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16269662 . A . PASS END=16269673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 16269674 . G . PASS END=16269689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr1 16269894 . C . PASS END=16269895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:30,0 chr1 16269896 . C . PASS END=16269896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 16269897 . T . PASS END=16269899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 16269900 . C . PASS END=16269900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 16269901 . C . PASS END=16269912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 16269913 . A . PASS END=16269913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:31,0 chr1 16269914 . G . PASS END=16269996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:37,0 chr1 16269997 . A . PASS END=16270008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 16270009 . T . PASS END=16270009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,854:0,42,255:25,0 chr1 16270010 . C . PASS END=16270014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 16270094 . C . PASS END=16270111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 16270112 . G . PASS END=16270112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16270113 . C . PASS END=16270117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 16270118 . G . PASS END=16270118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:27,0 chr1 16270119 . C . PASS END=16270121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr1 16270122 . A . PASS END=16270122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:29,0 chr1 16270123 . G . PASS END=16270123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:32,0 chr1 16270124 . C . PASS END=16270125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 16270126 . C . PASS END=16270130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 16270131 . G . PASS END=16270131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 16270132 . T . PASS END=16270198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:33:0,85,976:0,85,255:38,0 chr1 16270199 . G . PASS END=16270199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 16270200 . C . PASS END=16270207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 16270208 . T . PASS END=16270210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,83,255:25,0 chr1 16270303 . C . PASS END=16270303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16270304 . T . PASS END=16270304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 16270305 . G . PASS END=16270305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16270306 . A . PASS END=16270307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 16270308 . G . PASS END=16270314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:31,0 chr1 16270315 . A . PASS END=16270316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 16270317 . T . PASS END=16270317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 16270318 . G . PASS END=16270318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 16270319 . C . PASS END=16270342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1180:0,86,255:33,0 chr1 16270343 . G . PASS END=16270343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 16270344 . G . PASS END=16270385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:33,0 chr1 16270386 . C . PASS END=16270386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:26,0 chr1 16270387 . C . PASS END=16270388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 16270389 . A . PASS END=16270389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr1 16270390 . C . PASS END=16270390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16270795 . C . PASS END=16270795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr1 16270796 . T . PASS END=16270815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,553:0,48,255:19,0 chr1 16270816 . G . PASS END=16270816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 16270817 . T . PASS END=16270817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 16270818 . G . PASS END=16270818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 16270819 . T . PASS END=16270819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 16270820 . G . PASS END=16270836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:26,0 chr1 16270837 . G . PASS END=16270838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 16270839 . C . PASS END=16270842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 16270843 . G . PASS END=16270847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16270848 . G . PASS END=16270866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,923:0,62,255:26,0 chr1 16270867 . C . PASS END=16270867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16270868 . T . PASS END=16270868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 16270869 . T . PASS END=16270873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16270874 . G . PASS END=16270884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 16270885 . G . PASS END=16270887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16270888 . G . PASS END=16270888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 16270889 . G . PASS END=16270908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 16270909 . C . PASS END=16270909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 16270910 . T . PASS END=16270912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16270913 . T . PASS END=16270938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,828:0,65,255:25,0 chr1 16270939 . C . PASS END=16270940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,790:0,52,255:21,0 chr1 16270941 . G . PASS END=16270942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16270943 . T . PASS END=16270943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:19,0 chr1 16270944 . G . PASS END=16270945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 16270946 . C . PASS END=16270946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 16270947 . G . PASS END=16270948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 16270949 . T . PASS END=16270949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr1 16270950 . T . PASS END=16270954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 16270955 . T . PASS END=16270955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 16270956 . T . PASS END=16270960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16270961 . G . PASS END=16270990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:19,0 chr1 16270991 . C . PASS END=16271005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 16271006 . T . PASS END=16271024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,681:0,41,255:19,0 chr1 16271025 . T . PASS END=16271026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr1 16271027 . T . PASS END=16271027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:18,0 chr1 16271028 . G . PASS END=16271028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 16271029 . C . PASS END=16271036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr1 16271037 . G . PASS END=16271037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 16271038 . C . PASS END=16271039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 16271040 . G . PASS END=16271040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 16271041 . G . PASS END=16271042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 16271043 . T . PASS END=16271043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 16271044 . G . PASS END=16271044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 16271045 . A . PASS END=16271045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 16271046 . T . PASS END=16271051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 16271052 . G . PASS END=16271052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,728:0,19,255:19,0 chr1 16271053 . G . PASS END=16271055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16271056 . G . PASS END=16271056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 16271057 . C . PASS END=16271057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16271058 . T . PASS END=16271058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,630:0,46,255:19,0 chr1 16271059 . C . PASS END=16271060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 16271061 . T . PASS END=16271061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr1 16271062 . C . PASS END=16271062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 16271063 . C . PASS END=16271064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16271065 . G . PASS END=16271065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:20,0 chr1 16271066 . C . PASS END=16271074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 16271075 . C . PASS END=16271095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,690:0,44,255:19,0 chr1 16271192 . C . PASS END=16271193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 16271194 . G . PASS END=16271211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 16271212 . C . PASS END=16271218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 16271219 . G . PASS END=16271219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 16271220 . C . PASS END=16271258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 16271259 . A . PASS END=16271259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 16271260 . G . PASS END=16271283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,62,255:24,0 chr1 16271284 . G . PASS END=16271305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 16271306 . C . PASS END=16271306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 16271307 . C . PASS END=16271309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 16271310 . T . PASS END=16271310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 16271311 . G . PASS END=16271330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 16271331 . A . PASS END=16271334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 16271432 . C . PASS END=16271435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 16271436 . C . PASS END=16271445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,476:0,42,255:17,0 chr1 16271446 . T . PASS END=16271446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 16271447 . G . PASS END=16271462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,629:0,41,255:18,0 chr1 16271463 . T . PASS END=16271463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 16271464 . T . PASS END=16271471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 16271472 . G . PASS END=16271474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 16271475 . C . PASS END=16271489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 16271490 . C . PASS END=16271516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:26,0 chr1 16271517 . C . PASS END=16271523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 16271524 . C . PASS END=16271524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 16271525 . C . PASS END=16271528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 16271529 . C . PASS END=16271529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 16271530 . C . PASS END=16271653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:30:0,81,1215:0,89,255:40,0 chr1 16271654 . C . PASS END=16271654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,2 chr1 16271655 . T . PASS END=16271655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1147:0,33,255:32,2 chr1 16271656 . T . PASS END=16271682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1041:0,82,255:33,0 chr1 16271683 . G . PASS END=16271696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:26,0 chr1 16271697 . T . PASS END=16271697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:20,0 chr1 16272210 . C . PASS END=16272212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 16272213 . G . PASS END=16272249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,550:0,45,255:16,0 chr1 16272250 . A G, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.110;ReadPosRankSum=2.055;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,12,0:0.706,0.000:17:4,4,0:1,8,0:45:85,0,44,421,179,600:255,0,135:4,0:5.0000e+01,1.3953e-04,4.6553e+01,4.2119e+02,2.1361e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,7,5:2,3,5,7 chr1 16272251 . G . PASS END=16272270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,714:0,51,255:19,0 chr1 16272271 . G . PASS END=16272274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 16272275 . G . PASS END=16272278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 16272279 . T . PASS END=16272279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16272280 . G . PASS END=16272287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 16272288 . C . PASS END=16272297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 16272298 . C . PASS END=16272308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 16272309 . C . PASS END=16272313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 16272314 . G . PASS END=16272324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:18,0 chr1 16272325 . C . PASS END=16272325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 16272326 . T . PASS END=16272335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:16,0 chr1 16272649 . C . PASS END=16272649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 16272650 . G . PASS END=16272659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 16272660 . C . PASS END=16272680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:26,0 chr1 16272681 . T . PASS END=16272681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:25,0 chr1 16272682 . C . PASS END=16272683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 16272684 . T . PASS END=16272692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16272693 . T . PASS END=16272697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 16272698 . G . PASS END=16272698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16272699 . C . PASS END=16272699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16272700 . T . PASS END=16272800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:28:0,80,1123:0,80,255:40,0 chr1 16272801 . A . PASS END=16272811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:22,0 chr1 16273430 . C . PASS END=16273488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:26,0 chr1 16273489 . T . PASS END=16273489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 16273490 . T . PASS END=16273514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 16273515 . G . PASS END=16273515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 16273516 . T . PASS END=16273518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 16273519 . T . PASS END=16273519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 16273520 . G . PASS END=16273541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 16273542 . G . PASS END=16273585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 16273586 . C . PASS END=16273596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 16273597 . A . PASS END=16273602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 16273603 . A . PASS END=16273603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 16273604 . G . PASS END=16273607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 16273608 . C . PASS END=16273608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 16273609 . T . PASS END=16273615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 16273616 . G . PASS END=16273616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 16273617 . G . PASS END=16273618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 16274786 . C . PASS END=16274807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,853:0,69,255:26,0 chr1 16274808 . G . PASS END=16274812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:29,0 chr1 16274813 . C . PASS END=16274814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 16274815 . A . PASS END=16274954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1107:0,80,255:40,0 chr1 16274955 . T . PASS END=16274955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:27,0 chr1 16274956 . T . PASS END=16274960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 16274961 . G . PASS END=16274961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16274962 . A . PASS END=16274963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 16274964 . A . PASS END=16274965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 16274966 . G . PASS END=16274970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 16274971 . C . PASS END=16274981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:24,0 chr1 16274982 . A . PASS END=16274990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,59,255:21,0 chr1 16330799 . A . PASS END=16330847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1125:0,80,255:35,0 chr1 16330848 . C . PASS END=16330848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr1 16330849 . C . PASS END=16330872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1106:0,87,255:34,0 chr1 16330873 . C . PASS END=16330880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 16332414 . G . PASS END=16332414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 16332415 . T . PASS END=16332441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:25,0 chr1 16332442 . C . PASS END=16332442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 16332443 . G . PASS END=16332444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16332445 . C . PASS END=16332516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1075:0,86,255:34,0 chr1 16332517 . A . PASS END=16332522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,80,255:26,0 chr1 16332523 . C . PASS END=16332523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16332524 . C . PASS END=16332524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16332525 . A . PASS END=16332530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 16332531 . C . PASS END=16332533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16332534 . G . PASS END=16332543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1102:0,87,255:29,0 chr1 16332544 . A . PASS END=16332544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 16332545 . G . PASS END=16332545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 16332546 . G . PASS END=16332568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 16332569 . A . PASS END=16332570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16332571 . C . PASS END=16332604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:26,0 chr1 16332605 . C . PASS END=16332617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,737:0,47,255:19,0 chr1 16332618 . C . PASS END=16332622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 16332623 . A . PASS END=16332623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 16332624 . T . PASS END=16332643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr1 16332644 . C . PASS END=16332644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 16332645 . A . PASS END=16332661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 16332662 . C . PASS END=16332675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,50,255:19,0 chr1 16332676 . G . PASS END=16332676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:17,0 chr1 16332677 . T . PASS END=16332687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:18,0 chr1 16332688 . A . PASS END=16332688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 16332689 . G . PASS END=16332703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,643:0,51,255:17,0 chr1 16332704 . A . PASS END=16332747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr1 16332748 . C . PASS END=16332748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 16332749 . G . PASS END=16332751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 16332752 . A . PASS END=16332752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 16332753 . A . PASS END=16332810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 16332811 . C . PASS END=16332841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 16342075 . T . PASS END=16342084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 16342085 . A . PASS END=16342097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 16342098 . A . PASS END=16342098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 16342099 . G . PASS END=16342123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 16342124 . G . PASS END=16342124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 16342125 . G . PASS END=16342126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 16342127 . T . PASS END=16342127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 16342128 . G . PASS END=16342143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 16342144 . A . PASS END=16342144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 16342145 . G . PASS END=16342152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 16342153 . G . PASS END=16342153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 16342154 . C . PASS END=16342156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16342157 . T . PASS END=16342160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16342161 . C . PASS END=16342166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16342167 . G . PASS END=16342187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 16342188 . G . PASS END=16342188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:16,0 chr1 16342189 . G . PASS END=16342199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,729:0,57,255:19,0 chr1 16342200 . C . PASS END=16342234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,44,255:19,0 chr1 16342235 . A . PASS END=16342236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 16342237 . A G, 47.48 PASS DP=14;MQ=250.00;MQRankSum=2.933;ReadPosRankSum=0.533;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,5,0:0.357,0.000:14:5,1,0:4,4,0:46:82,0,50,179,322,501:152,0,255:9,0:4.7484e+01,9.9144e-05,5.3000e+01,1.7879e+02,3.5655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,2,3:4,5,2,3 chr1 16342238 . G . PASS END=16342250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16342251 . C . PASS END=16342254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16343569 . C . PASS END=16343651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:42:0,95,1300:0,95,255:40,0 chr1 16343652 . A . PASS END=16343652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:63:49:0,63,1310:0,63,255:38,0 chr1 16343653 . C . PASS END=16343704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1260:0,99,255:40,0 chr1 16343705 . G . PASS END=16343717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:26,0 chr1 16344260 . C . PASS END=16344265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16344266 . A . PASS END=16344266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 16344267 . G . PASS END=16344270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 16344271 . A . PASS END=16344272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 16344273 . G . PASS END=16344295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,847:0,69,255:25,0 chr1 16344296 . A . PASS END=16344296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 16344297 . G . PASS END=16344302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 16344303 . A . PASS END=16344305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 16344306 . G . PASS END=16344308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16344309 . A . PASS END=16344309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 16344310 . T . PASS END=16344319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,776:0,66,255:22,0 chr1 16344320 . T . PASS END=16344320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 16344321 . G . PASS END=16344322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16344323 . T . PASS END=16344324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 16344325 . A . PASS END=16344329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 16344330 . C . PASS END=16344330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:21,0 chr1 16344331 . T . PASS END=16344331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16344332 . T . PASS END=16344333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 16344334 . T . PASS END=16344334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16344335 . C . PASS END=16344336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 16344337 . A . PASS END=16344337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16344338 . T . PASS END=16344339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,743:0,50,255:18,0 chr1 16344340 . G . PASS END=16344347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 16344348 . C . PASS END=16344359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 16344360 . A G, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=2.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:5,3,0:6,7,0:47:85,0,47,185,185,185:255,0,255:8,0:4.9898e+01,8.8013e-05,5.0000e+01,1.8467e+02,2.1944e+02,1.8768e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,6,5,5:5,6,6,4 chr1 16344361 . G . PASS END=16344363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 16344364 . C . PASS END=16344364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:16,0 chr1 16344365 . G . PASS END=16344390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:19,0 chr1 16344391 . G . PASS END=16344392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16344393 . G . PASS END=16344395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16344396 . G . PASS END=16344401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 16344402 . G A, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=-0.760;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,11,0:0.550,0.000:20:5,6,0:4,5,0:48:85,0,50,353,322,675:255,0,255:10,0:5.0000e+01,6.7045e-05,5.2649e+01,3.5327e+02,3.5656e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,6,5:3,6,7,4 chr1 16344403 . G . PASS END=16344404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16344405 . A . PASS END=16344405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:18,0 chr1 16344406 . G . PASS END=16344407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16344408 . G . PASS END=16344408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:18,0 chr1 16344409 . G . PASS END=16344413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16344414 . G . PASS END=16344414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,609:0,46,255:19,0 chr1 16344415 . A . PASS END=16344415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16344416 . A . PASS END=16344419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16344420 . T . PASS END=16344420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,532:0,29,255:17,0 chr1 16344421 . C . PASS END=16344435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:19:0,46,670:0,46,255:19,0 chr1 16344436 . G . PASS END=16344436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:16,0 chr1 16344437 . T . PASS END=16344439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 16344440 . A . PASS END=16344447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 16344448 . C . PASS END=16344451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 16344452 . G . PASS END=16344456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 16344457 . A . PASS END=16344478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:17,0 chr1 16344479 . T . PASS END=16344490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:15:0,35,540:0,35,255:13,0 chr1 16344491 . C . PASS END=16344493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 16344494 . G A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.366;ReadPosRankSum=3.366;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,8,0:0.533,0.000:15:3,4,0:4,4,0:48:85,0,50,278,250,528:255,0,226:7,0:5.0000e+01,6.6010e-05,5.2856e+01,2.7804e+02,2.8513e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,6,4,4:5,2,4,4 chr1 16344495 . G . PASS END=16344501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 16344502 . C . PASS END=16344502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 16344503 . A . PASS END=16344514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:19,0 chr1 16344515 . G . PASS END=16344525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 16344526 . T . PASS END=16344526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 16344527 . C . PASS END=16344530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16344531 . G . PASS END=16344531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16344532 . C . PASS END=16344565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,574:0,48,255:18,0 chr1 16344566 . A . PASS END=16344566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 16344567 . A . PASS END=16344585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,590:0,48,255:19,0 chr1 16344586 . T . PASS END=16344621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr1 16344622 . C . PASS END=16344624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 16344625 . C G, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=1.355;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:6,9,0:0.600,0.000:15:4,4,0:2,5,0:48:85,0,49,322,215,537:255,0,187:5,0:5.0000e+01,7.2740e-05,5.1689e+01,3.2188e+02,2.4941e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,4,5:3,3,5,4:16344625 chr1 16344626 . T . PASS END=16344631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 16344632 . G . PASS END=16344633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 16344634 . C T, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=2.048;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:8,8,0:0.500,0.000:16:6,4,0:2,4,0:48:85,0,50,286,286,572:255,0,255:7,0:5.0000e+01,6.5233e-05,5.3000e+01,2.8602e+02,3.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,6,5,3:4,4,5,3:16344625 chr1 16344635 . C . PASS END=16344643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr1 16344644 . C . PASS END=16344654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 16344655 . C . PASS END=16344663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,620:0,45,255:16,0 chr1 16344664 . G A, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=2.153;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,8,0:0.500,0.000:16:5,4,0:3,4,0:48:85,0,50,286,286,572:255,0,255:8,0:5.0000e+01,6.5233e-05,5.3000e+01,2.8600e+02,3.2089e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,2,6:4,4,4,4 chr1 16344665 . C . PASS END=16344679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:17,0 chr1 16344680 . G . PASS END=16344680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 16344681 . C . PASS END=16344694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 16344695 . C . PASS END=16344722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,458:0,39,255:13,0 chr1 16345629 . C . PASS END=16345630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 16345631 . T . PASS END=16345631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 16345632 . G . PASS END=16345642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 16345643 . G . PASS END=16345656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr1 16345657 . C . PASS END=16345673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:19,0 chr1 16345674 . C . PASS END=16345693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:26,0 chr1 16345694 . C . PASS END=16345707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr1 16345708 . T . PASS END=16345708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 16345709 . G . PASS END=16345736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr1 16345737 . T . PASS END=16345737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 16345738 . C . PASS END=16345765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1141:0,90,255:30,0 chr1 16345766 . C . PASS END=16345792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,931:0,64,255:26,0 chr1 16345793 . T . PASS END=16345799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,59,255:19,0 chr1 16345800 . G . PASS END=16345809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 16345810 . C . PASS END=16345835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:19,0 chr1 16345836 . G . PASS END=16345849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,664:0,63,255:21,0 chr1 16345850 . A . PASS END=16345852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16345853 . G . PASS END=16345860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 16345861 . C . PASS END=16345862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 16345863 . G . PASS END=16345866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16345867 . G . PASS END=16345867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 16345868 . A . PASS END=16345870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16345871 . T . PASS END=16345877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16345878 . C . PASS END=16345896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:23,0 chr1 16345897 . T . PASS END=16345898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 16345899 . C . PASS END=16345903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 16345904 . T . PASS END=16345904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:20,0 chr1 16345905 . C . PASS END=16345911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16345912 . T . PASS END=16345912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 16345913 . C . PASS END=16345923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 16345924 . T . PASS END=16345924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 16345925 . G . PASS END=16345926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16345927 . C . PASS END=16345927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 16345928 . A . PASS END=16345937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 16345938 . G . PASS END=16345955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,674:0,44,255:19,0 chr1 16345956 . T . PASS END=16345956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr1 16345957 . C . PASS END=16345960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 16345961 . C . PASS END=16345961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:13,0 chr1 16345962 . C . PASS END=16345964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 16349115 . A . PASS END=16349123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 16349124 . T . PASS END=16349207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,504:0,42,255:19,0 chr1 16349208 . A . PASS END=16349208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 16349209 . T . PASS END=16349212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 16349213 . A . PASS END=16349214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 16350295 . G . PASS END=16350296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 16350297 . G . PASS END=16350297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16350298 . G . PASS END=16350298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 16350299 . C . PASS END=16350299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16350300 . C . PASS END=16350300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 16350301 . T . PASS END=16350320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,774:0,63,255:26,0 chr1 16350321 . G . PASS END=16350406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:37,0 chr1 16350407 . C . PASS END=16350423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 16351258 . C . PASS END=16351268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,856:0,62,255:26,0 chr1 16351269 . C . PASS END=16351270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 16351271 . G . PASS END=16351271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 16351272 . T . PASS END=16351273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 16351274 . C . PASS END=16351274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 16351275 . A G, 49.60 PASS DP=28;MQ=146.84;MQRankSum=-0.069;ReadPosRankSum=0.069;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:6,8,0:8,6,0:46:84,0,46,184,184,184:255,0,255:13,0:4.9600e+01,9.9144e-05,4.9250e+01,1.8437e+02,2.1914e+02,1.8738e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,7,8,6:5,9,8,6 chr1 16351276 . G . PASS END=16351279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 16351280 . G . PASS END=16351280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr1 16351281 . A . PASS END=16351281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 16351282 . T . PASS END=16351306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:30:0,86,1081:0,86,255:34,0 chr1 16351307 . T . PASS END=16351307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1115:0,69,255:32,0 chr1 16351308 . C . PASS END=16351312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1272:0,102,255:36,0 chr1 16351313 . C . PASS END=16351378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,86,255:40,0 chr1 16351379 . C . PASS END=16351386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:25,0 chr1 16352603 . G . PASS END=16352742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1260:0,87,255:40,0 chr1 16353031 . G . PASS END=16353031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 16353032 . G . PASS END=16353032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 16353033 . C . PASS END=16353041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:16,0 chr1 16353042 . G . PASS END=16353042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 16353043 . C . PASS END=16353055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,574:0,48,255:18,0 chr1 16353056 . T . PASS END=16353056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 16353057 . G . PASS END=16353070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 16353071 . T . PASS END=16353071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 16353072 . G . PASS END=16353086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr1 16353087 . C . PASS END=16353087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 16353088 . A . PASS END=16353090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 16353091 . A . PASS END=16353091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 16353092 . C . PASS END=16353106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:17,0 chr1 16353107 . A . PASS END=16353107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 16353108 . G . PASS END=16353108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 16353192 . A . PASS END=16353197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 16353198 . A . PASS END=16353205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 16353206 . A . PASS END=16353206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:12,0 chr1 16353207 . A . PASS END=16353213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 16353214 . T . PASS END=16353221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16353222 . G . PASS END=16353231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 16353232 . C . PASS END=16353234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16353235 . T . PASS END=16353240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 16353241 . T . PASS END=16353249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 16353250 . T . PASS END=16353250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:11,0 chr1 16353251 . C . PASS END=16353270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 16353805 . G . PASS END=16353817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,864:0,64,255:26,0 chr1 16353818 . C . PASS END=16353831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,984:0,81,255:31,0 chr1 16353832 . C . PASS END=16353832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,0 chr1 16353833 . T . PASS END=16353897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:33:0,93,1313:0,95,255:40,0 chr1 16353898 . T . PASS END=16353898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1337:0,68,255:37,0 chr1 16353899 . C . PASS END=16353930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1404:0,101,255:39,0 chr1 16354316 . A . PASS END=16354317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,111,1380:0,111,255:39,0 chr1 16354318 . A . PASS END=16354377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:95:37:0,95,1341:0,95,255:40,0 chr1 16354378 . A . PASS END=16354378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1162:0,61,255:31,0 chr1 16354379 . T . PASS END=16354379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 16354380 . C . PASS END=16354380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 16354381 . T . PASS END=16354394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1255:0,86,255:33,0 chr1 16354395 . G . PASS END=16354395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:30,0 chr1 16354396 . C . PASS END=16354400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 16354513 . T . PASS END=16354598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1211:0,81,255:38,0 chr1 16354599 . A . PASS END=16354599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1049:0,66,255:29,0 chr1 16354600 . A . PASS END=16354605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:31:0,82,1014:0,82,255:31,0 chr1 16354606 . G . PASS END=16354614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:26,0 chr1 16355256 . C . PASS END=16355265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:24,0 chr1 16355266 . T . PASS END=16355269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 16355270 . C . PASS END=16355321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,61,255:25,0 chr1 16355322 . C . PASS END=16355340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 16355621 . C . PASS END=16355630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr1 16355631 . A . PASS END=16355633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 16355634 . A . PASS END=16355634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 16355635 . G . PASS END=16355663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,869:0,63,255:26,0 chr1 16355664 . C . PASS END=16355673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 16355674 . G . PASS END=16355683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 16355684 . A . PASS END=16355685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16355686 . C . PASS END=16355686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr1 16355687 . T . PASS END=16355689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16355690 . A . PASS END=16355690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 16355691 . G . PASS END=16355711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1149:0,87,255:31,0 chr1 16355712 . T . PASS END=16355712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 16355713 . C . PASS END=16355726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1208:0,83,255:31,0 chr1 16355727 . T . PASS END=16355727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:26,0 chr1 16355728 . T . PASS END=16355728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 16355729 . T . PASS END=16355729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 16355730 . G . PASS END=16355743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 16355744 . C . PASS END=16355745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 16355746 . C . PASS END=16355750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr1 16355751 . G . PASS END=16355751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 16355752 . G . PASS END=16355757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 16355758 . C . PASS END=16355775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,923:0,64,255:25,0 chr1 16355776 . C . PASS END=16355776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 16355777 . T . PASS END=16355777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 16355778 . T . PASS END=16355787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 16355788 . T . PASS END=16355788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 16355789 . A . PASS END=16355794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 16356226 . T . PASS END=16356295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:48:0,111,1674:0,111,255:40,0 chr1 16356460 . G . PASS END=16356460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16356461 . A . PASS END=16356463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16356464 . T . PASS END=16356470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 16356471 . G . PASS END=16356480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 16356481 . T . PASS END=16356481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 16356482 . G . PASS END=16356484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 16356485 . A . PASS END=16356485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16356486 . G . PASS END=16356486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16356487 . A . PASS END=16356494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 16356495 . G . PASS END=16356500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16356501 . G A, 50.00 PASS DP=14;MQ=246.59;MQRankSum=-0.400;ReadPosRankSum=1.600;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,9,0:0.643,0.000:14:2,5,0:3,4,0:47:85,0,47,322,179,501:255,0,152:5,0:5.0000e+01,8.2318e-05,5.0484e+01,3.2193e+02,2.1364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,3,6:2,3,5,4 chr1 16356502 . C . PASS END=16356531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 16356532 . T . PASS END=16356552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 16356553 . G . PASS END=16356554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 16356555 . G . PASS END=16356570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 16356956 . G . PASS END=16356968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 16356969 . C . PASS END=16356994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:24,0 chr1 16356995 . C . PASS END=16356997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16356998 . C . PASS END=16357002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 16357003 . C . PASS END=16357005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16357006 . C . PASS END=16357006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 16357007 . T . PASS END=16357039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 16357040 . C . PASS END=16357040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:25,0 chr1 16357041 . A . PASS END=16357041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 16357042 . C . PASS END=16357045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16357046 . C . PASS END=16357050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16357051 . C . PASS END=16357052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16357053 . G . PASS END=16357058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1031:0,71,255:27,0 chr1 16357059 . G . PASS END=16357059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16357060 . G . PASS END=16357061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16357062 . G . PASS END=16357071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 16357072 . A . PASS END=16357086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 16357087 . A . PASS END=16357087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 16357088 . G . PASS END=16357090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16357091 . G . PASS END=16357091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16357092 . C . PASS END=16357092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 16357093 . C . PASS END=16357093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16357094 . A . PASS END=16357150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,862:0,61,255:26,0 chr1 16357151 . T . PASS END=16357151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 16357152 . T . PASS END=16357152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16357153 . C . PASS END=16357153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16357154 . T . PASS END=16357155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16357156 . G . PASS END=16357169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16358205 . C . PASS END=16358322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:33:0,80,1202:0,80,255:40,0 chr1 16358323 . C . PASS END=16358331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:25,0 chr1 16358332 . A . PASS END=16358332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,803:0,50,255:19,0 chr1 16358333 . G . PASS END=16358338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr1 16358698 . A . PASS END=16358707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 16358708 . C . PASS END=16358709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 16358710 . T . PASS END=16358713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr1 16358714 . A . PASS END=16358714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 16358715 . G . PASS END=16358722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr1 16358723 . G . PASS END=16358740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,886:0,72,255:24,0 chr1 16358741 . G . PASS END=16358748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:53:23:0,53,790:0,53,255:19,0 chr1 16358749 . T . PASS END=16358751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16358752 . A . PASS END=16358752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 16358753 . G . PASS END=16358756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 16358757 . G . PASS END=16358757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 16358758 . A . PASS END=16358765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,831:0,69,255:24,0 chr1 16358766 . T . PASS END=16358766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 16358767 . C . PASS END=16358776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,922:0,62,255:24,0 chr1 16358777 . A . PASS END=16358777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:23,0 chr1 16358778 . G . PASS END=16358778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16358779 . G . PASS END=16358779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 16358780 . A . PASS END=16358780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16358781 . C . PASS END=16358782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:22,0 chr1 16358783 . C . PASS END=16358784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16358785 . A . PASS END=16358785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,703:0,33,255:22,0 chr1 16358786 . G . PASS END=16358786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16358938 . C . PASS END=16358940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 16358941 . T . PASS END=16358941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 16358942 . G . PASS END=16358942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16358943 . T . PASS END=16358943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:25,0 chr1 16358944 . C . PASS END=16358947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16358948 . A . PASS END=16358948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 16358949 . G . PASS END=16358954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,926:0,81,255:27,0 chr1 16358955 . C . PASS END=16358963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 16358964 . G . PASS END=16358968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 16358969 . G . PASS END=16358969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 16358970 . C . PASS END=16358972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 16358973 . C . PASS END=16358974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 16358975 . C . PASS END=16358976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 16358977 . G . PASS END=16358977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 16358978 . A . PASS END=16358980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 16358981 . C . PASS END=16358981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,1000:0,13,255:28,0 chr1 16358982 . A . PASS END=16358994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1089:0,90,255:31,0 chr1 16358995 . C . PASS END=16359008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:26,0 chr1 16359009 . C . PASS END=16359021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 16359665 . G . PASS END=16359670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1257:0,89,255:35,0 chr1 16359671 . A . PASS END=16359671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1114:0,66,255:34,0 chr1 16359672 . A . PASS END=16359677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1244:0,105,255:37,0 chr1 16359678 . T . PASS END=16359714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:37:0,95,1360:0,95,255:38,0 chr1 16359715 . G A, 45.61 PASS DP=39;MQ=202.17;MQRankSum=1.920;ReadPosRankSum=3.479;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,15,0:0.385,0.000:39:12,9,0:12,6,0:45:80,0,50,536,829,1366:255,0,255:21,0:4.5612e+01,1.4108e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,6,9:12,12,8,7 chr1 16359716 . C . PASS END=16359727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,99,1412:0,101,255:35,0 chr1 16359728 . G . PASS END=16359728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 16359729 . T . PASS END=16359737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1255:0,89,255:34,0 chr1 16359738 . T . PASS END=16359738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:30,0 chr1 16359739 . G . PASS END=16359746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:32,0 chr1 16359747 . T . PASS END=16359751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 16360106 . A . LowGQ END=16360107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,8:30:0:30:0,0,488:154,0,255:21,0 chr1 16360108 . G . PASS END=16360108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 16360109 . A . LowGQ END=16360110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,8:29:0:29:0,0,490:156,0,255:21,0 chr1 16360111 . G . PASS END=16360111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 16360112 . A . LowGQ END=16360114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,9:29:0:29:0,0,439:126,0,255:21,0 chr1 16360115 . G . PASS END=16360115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,71,255:21,0 chr1 16360116 . C . LowGQ END=16360128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:29:0,0,526:56,0,255:26,0 chr1 16360129 . G . PASS END=16360129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16360130 . A . LowGQ END=16360137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,774:0,0,255:29,0 chr1 16360138 . G . PASS END=16360138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 16360139 . C . LowGQ END=16360140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:0:32:0,0,978:0,0,255:28,0 chr1 16360141 . A . PASS END=16360141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:26:32:0,26,1004:0,26,255:28,0 chr1 16360142 . G . PASS END=16360142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 16360143 . C . PASS END=16360143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1033:0,41,255:28,0 chr1 16360144 . T . LowGQ END=16360144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:0:32:0,0,941:12,0,255:27,0 chr1 16360145 . C . PASS END=16360146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:35:32:0,35,1049:0,35,255:28,0 chr1 16360147 . A . PASS END=16360147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr1 16360148 . A . PASS END=16360149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1064:0,57,255:29,0 chr1 16360150 . G . PASS END=16360150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 16360151 . T . PASS END=16360151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr1 16360152 . G . PASS END=16360152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 16360153 . A . PASS END=16360153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 16370988 . A . PASS END=16370995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 16370996 . G . PASS END=16371006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr1 16371007 . T . PASS END=16371008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16371009 . C . PASS END=16371011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16371012 . G . PASS END=16371029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 16371030 . C . PASS END=16371066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 16371067 . G T, 46.55 PASS DP=19;MQ=226.68;MQRankSum=-0.803;ReadPosRankSum=2.662;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:7,5,0:5,2,0:45:81,0,47,181,181,181:214,0,255:9,0:4.6553e+01,1.3953e-04,5.0000e+01,1.8132e+02,2.1609e+02,1.8433e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,5,1,6:8,4,3,4 chr1 16371068 . C . PASS END=16371072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 16371073 . G . PASS END=16371073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 16371074 . C . PASS END=16371087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 16372053 . G . PASS END=16372053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 16372054 . T . PASS END=16372054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 16372055 . G . PASS END=16372078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:13,0 chr1 16372079 . C . PASS END=16372091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 16372092 . G . PASS END=16372092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 16372093 . C . PASS END=16372107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 16372108 . C . PASS END=16372112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 16372113 . T . PASS END=16372147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,698:0,50,255:19,0 chr1 16372148 . G . PASS END=16372150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 16372151 . A . PASS END=16372170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:19,0 chr1 16372171 . T . PASS END=16372171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 16372172 . G . PASS END=16372181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 16373029 . G . PASS END=16373033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 16373034 . C . PASS END=16373039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:31,0 chr1 16373040 . G . PASS END=16373040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:29,0 chr1 16373041 . C . PASS END=16373046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1241:0,99,255:35,0 chr1 16373047 . A . PASS END=16373047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 16373048 . G . PASS END=16373086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1183:0,91,255:38,0 chr1 16373087 . G . PASS END=16373096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1365:0,98,255:37,0 chr1 16373097 . C . PASS END=16373097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:35,0 chr1 16373098 . C . PASS END=16373123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:34:0,80,1327:0,80,255:36,0 chr1 16373124 . A G, 50.00 PASS DP=34;MQ=174.57;MQRankSum=0.086;ReadPosRankSum=0.673;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,18,0:0.529,0.000:34:7,14,0:9,4,0:48:85,0,50,644,564,1208:255,0,255:16,0:5.0000e+01,6.6527e-05,5.2749e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,9,9:11,5,9,9 chr1 16373125 . G . PASS END=16373135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1096:0,88,255:34,0 chr1 16373136 . G . PASS END=16373150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:25:0,60,900:0,75,255:24,0 chr1 16373151 . C . PASS END=16373152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr1 16373153 . C . PASS END=16373158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:20,0 chr1 16374400 . G . PASS END=16374403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 16374404 . T . PASS END=16374404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 16374405 . G . PASS END=16374495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:29:0,87,1057:0,87,255:40,0 chr1 16374496 . C . PASS END=16374532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,117,1651:0,119,255:40,0 chr1 16374533 . G C, 49.97 PASS DP=41;MQ=236.55;MQRankSum=-0.561;ReadPosRankSum=3.743;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,20,0:0.488,0.000:41:10,8,0:11,12,0:48:85,0,50,715,722,1437:255,0,255:21,0:4.9970e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,7,13:6,15,11,9 chr1 16374534 . A . PASS END=16374539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:40,0 chr1 16374838 . G . PASS END=16374848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 16374849 . G . PASS END=16374853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 16374854 . T . PASS END=16374854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 16374855 . G . PASS END=16374866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 16374867 . G . PASS END=16374895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,893:0,64,255:26,0 chr1 16374896 . C . PASS END=16374915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 16374999 . A . PASS END=16374999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 16375000 . A . LowGQ END=16375000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:7,0 chr1 16375001 . C . PASS END=16375002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:8,0 chr1 16375003 . A . PASS END=16375003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 16375004 . G . PASS END=16375006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,250:0,24,250:8,0 chr1 16375007 . C . PASS END=16375008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,231:0,7,231:7,0 chr1 16375009 . A . PASS END=16375018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,296:0,24,255:9,0 chr1 16375019 . A . LowGQ END=16375019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,247:3,0,250:8,0 chr1 16375020 . A . PASS END=16375020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 16375021 . T . PASS END=16375032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 16375033 . C . PASS END=16375054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 16375055 . A . PASS END=16375056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 16375057 . T . PASS END=16375062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 16375063 . C G, 0.45 DRAGENSnpHardQUAL DP=10;MQ=93.22;MQRankSum=0.480;ReadPosRankSum=1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:8,2,0:0.200,0.000:10:4,2,0:4,0,0:10:25,0,45,145,145,145:47,0,255:7,0:4.4773e-01,1.0090e+01,5.8390e+01,1.5538e+02,1.9015e+02,1.5839e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,5,1,1:5,3,1,1:16375063 chr1 16375064 . A C, 0.45 DRAGENSnpHardQUAL DP=10;MQ=93.22;MQRankSum=0.480;ReadPosRankSum=1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:8,2,0:0.200,0.000:10:4,2,0:4,0,0:10:25,0,45,145,145,145:48,0,255:7,0:4.4773e-01,1.0090e+01,5.8390e+01,1.5538e+02,1.9015e+02,1.5839e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,5,1,1:5,3,1,1:16375063 chr1 16375065 . G . PASS END=16375069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 16375070 . C . PASS END=16375070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 16375071 . T . PASS END=16375074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 16375075 . G . PASS END=16375075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 16375076 . C . PASS END=16375076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 16375077 . G . PASS END=16375077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 16375467 . A . PASS END=16375472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 16375473 . T . PASS END=16375474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 16375475 . C . PASS END=16375475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 16375476 . C . PASS END=16375476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 16375477 . C . PASS END=16375480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 16375481 . C . PASS END=16375481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 16375482 . C . PASS END=16375509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:12,0 chr1 16375510 . G A, 29.17 PASS DP=11;MQ=248.42;MQRankSum=2.262;ReadPosRankSum=2.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,3,0:0.273,0.000:11:4,2,0:4,1,0:29:64,0,50,107,286,393:83,0,255:8,0:2.9167e+01,5.2858e-03,5.3005e+01,1.0731e+02,3.2094e+02,3.9647e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,2,3,0:4,4,2,1 chr1 16375511 . A . PASS END=16375518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,421:0,33,255:13,0 chr1 16375519 . A . PASS END=16375525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 16375526 . G . PASS END=16375526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 16375527 . G . PASS END=16375547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 16375548 . G . PASS END=16375556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,620:0,44,255:19,0 chr1 16375557 . C . PASS END=16375559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 16375560 . A . PASS END=16375561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:17,0 chr1 16375562 . A . PASS END=16375562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:17,0 chr1 16375563 . G . PASS END=16375568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,743:0,50,255:19,0 chr1 16375569 . G . PASS END=16375570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16375571 . T . PASS END=16375571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 16375572 . G . PASS END=16375599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:26,0 chr1 16375600 . C . PASS END=16375735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1016:0,80,255:39,0 chr1 16375736 . G . PASS END=16375740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1015:0,71,255:26,0 chr1 16376111 . A . PASS END=16376111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 16376113 . A . PASS END=16376113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr1 16376114 . G . PASS END=16376124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:17,0 chr1 16376125 . C . PASS END=16376127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 16376128 . T . PASS END=16376128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:19,0 chr1 16376129 . C . PASS END=16376129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 16376130 . T . PASS END=16376130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr1 16376131 . A . PASS END=16376153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 16376154 . G . PASS END=16376156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 16376157 . C . PASS END=16376174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,725:0,60,255:23,0 chr1 16376175 . A . PASS END=16376175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 16376176 . T . PASS END=16376183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,807:0,69,255:23,0 chr1 16376184 . T . PASS END=16376185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,648:0,52,255:22,0 chr1 16376186 . T . PASS END=16376190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:26,0 chr1 16376191 . C T, 50.00 PASS DP=27;MQ=112.23;MQRankSum=-0.655;ReadPosRankSum=-0.461;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:7,8,0:6,6,0:48:85,0,49,443,436,879:255,0,255:13,0:5.0000e+01,7.2740e-05,5.1699e+01,4.4251e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,8,6:6,7,6,8 chr1 16376192 . G . PASS END=16376197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr1 16376310 . G . PASS END=16376318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:38,0 chr1 16376319 . T C, 47.07 PASS DP=39;MQ=239.86;MQRankSum=2.784;ReadPosRankSum=1.156;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,16,0:0.410,0.000:39:8,10,0:15,6,0:46:82,0,50,535,812,1348:255,0,255:22,0:4.7067e+01,1.0717e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,14,11,5:12,11,9,7 chr1 16376320 . G . PASS END=16376356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,104,1435:0,104,255:40,0 chr1 16376357 . T . PASS END=16376411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1382:0,101,255:40,0 chr1 16377011 . C . PASS END=16377011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 16377012 . A . PASS END=16377012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 16377013 . A . PASS END=16377013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 16377014 . G . PASS END=16377014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16377015 . C . PASS END=16377025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 16377026 . C . PASS END=16377027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,853:0,56,255:22,0 chr1 16377028 . C . PASS END=16377036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:26,0 chr1 16377037 . C . PASS END=16377050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,890:0,84,255:28,0 chr1 16377051 . T . PASS END=16377051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 16377052 . C . PASS END=16377053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16377054 . A . PASS END=16377055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16377056 . C . PASS END=16377056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16377057 . A . PASS END=16377057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:25,0 chr1 16377058 . C . PASS END=16377068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 16377069 . A . PASS END=16377069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 16377070 . G . PASS END=16377070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 16377071 . C . PASS END=16377074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:20,0 chr1 16377075 . G . PASS END=16377095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,586:0,54,255:19,0 chr1 16377370 . C . PASS END=16377370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 16377371 . T . PASS END=16377391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 16377392 . A . PASS END=16377392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 16377393 . C . PASS END=16377405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 16377406 . A . PASS END=16377406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 16377407 . A . PASS END=16377423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,925:0,64,255:26,0 chr1 16377424 . A . PASS END=16377425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 16377426 . G . PASS END=16377427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,955:0,67,255:26,0 chr1 16377428 . C . PASS END=16377431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16377432 . G . PASS END=16377494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,931:0,62,255:26,0 chr1 16377495 . C . PASS END=16377498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 16377499 . C . PASS END=16377532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,969:0,65,255:26,0 chr1 16377533 . T . PASS END=16377533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 16377534 . G . PASS END=16377543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 16377973 . T . PASS END=16378042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:65:0,120,1800:0,178,255:40,0 chr1 16378047 . G . PASS END=16378047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr1 16378205 . G . PASS END=16378205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16378206 . A . PASS END=16378206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 16378207 . G . PASS END=16378219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,939:0,72,255:25,0 chr1 16378220 . G . PASS END=16378220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:24,0 chr1 16378221 . C . PASS END=16378236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:25,0 chr1 16378237 . C . PASS END=16378238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:23,0 chr1 16378239 . C . PASS END=16378240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16378241 . C . PASS END=16378241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 16378242 . T . PASS END=16378244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16378245 . T . PASS END=16378245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 16378246 . A . PASS END=16378246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16378247 . T . PASS END=16378247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 16378248 . C . PASS END=16378249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:24,0 chr1 16378250 . T . PASS END=16378252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:24:0,42,805:0,42,255:24,0 chr1 16378253 . C . PASS END=16378272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,893:0,65,255:25,0 chr1 16378273 . G . PASS END=16378273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 16378274 . G . PASS END=16378274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 16378275 . G . PASS END=16378275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 16378276 . A . PASS END=16378286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 16378287 . C . PASS END=16378287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 16378288 . A . PASS END=16378288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16378289 . T . PASS END=16378289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 16378290 . C . PASS END=16378296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 16378297 . G . PASS END=16378315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:19:0,46,713:0,46,255:19,0 chr1 16378693 . G . PASS END=16378694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16378695 . G . PASS END=16378695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16378696 . C . PASS END=16378696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 16378697 . T . PASS END=16378704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 16378705 . T . PASS END=16378705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:26,0 chr1 16378706 . C . PASS END=16378883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:31:0,81,1180:0,83,255:40,0 chr1 16378884 . C . PASS END=16378884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:33,0 chr1 16378885 . G . PASS END=16378906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:98:37:0,98,1321:0,98,255:37,0 chr1 16380134 . T . PASS END=16380138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr1 16380139 . A . PASS END=16380139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 16380140 . C . PASS END=16380157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 16380158 . C . PASS END=16380158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 16380159 . T . PASS END=16380163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:29,0 chr1 16380164 . G . PASS END=16380164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 16380165 . A . PASS END=16380195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1211:0,93,255:33,0 chr1 16380196 . T C, 50.00 PASS DP=34;MQ=129.04;MQRankSum=-1.493;ReadPosRankSum=-0.397;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,24,0:0.706,0.000:34:6,12,0:4,12,0:39:85,0,37,858,329,1187:255,0,241:10,0:5.0001e+01,5.2707e-04,3.9532e+01,4.5000e+02,3.6368e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,10,14:7,3,14,10 chr1 16380197 . G . PASS END=16380207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr1 16380208 . A . PASS END=16380208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 16380209 . G . PASS END=16380211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 16380212 . G . PASS END=16380242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:25:0,68,1014:0,68,255:26,0 chr1 16380243 . A G, 122.25 PASS DP=26;MQ=75.41;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,13,0:0,13,0:75:160,78,0,1000,78,1000:255,78,0:0,0:1.2225e+02,7.5250e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,15:0,0,12,14 chr1 16380244 . A . PASS END=16380246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,947:0,64,255:26,0 chr1 16380247 . A . PASS END=16380249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 16380250 . C . PASS END=16380255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:24,0 chr1 16380256 . T . PASS END=16380258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 16380259 . A . PASS END=16380265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 16380266 . A . PASS END=16380267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr1 16381930 . A . PASS END=16381930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 16381931 . G . PASS END=16381933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 16381934 . C . PASS END=16381934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:25,0 chr1 16381935 . C . PASS END=16381936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 16381937 . G . PASS END=16381938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 16381939 . T . PASS END=16381939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 16381940 . C . PASS END=16381941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 16381942 . T . PASS END=16381946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr1 16381947 . G . PASS END=16381947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 16381948 . G . PASS END=16381986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:32,0 chr1 16381987 . C . PASS END=16381987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 16381988 . T . PASS END=16381989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 16381990 . A . PASS END=16381990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:25,0 chr1 16381991 . G . PASS END=16381992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16381993 . C . PASS END=16381993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:25,0 chr1 16381994 . T . PASS END=16381994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16381995 . C . PASS END=16381996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 16381997 . T . PASS END=16381997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16381998 . T . PASS END=16381999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16382000 . C . PASS END=16382000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 16382001 . T . PASS END=16382007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1035:0,84,255:29,0 chr1 16382008 . C . PASS END=16382008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 16382009 . T . PASS END=16382013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 16382014 . A . PASS END=16382014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:26,0 chr1 16382015 . C . PASS END=16382016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16382017 . A . PASS END=16382017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:27,0 chr1 16382018 . G . PASS END=16382018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 16382170 . C . PASS END=16382170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 16382171 . A . PASS END=16382229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,592:0,40,255:19,0 chr1 16382230 . T . PASS END=16382230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 16382231 . C . PASS END=16382235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 16382236 . G . PASS END=16382236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 16382237 . A . PASS END=16382241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 16382242 . T . PASS END=16382242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 16382243 . C . PASS END=16382254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 16382917 . G . PASS END=16382921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,131,255:40,0 chr1 16382922 . C . PASS END=16383003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:50:0,93,1800:0,93,255:40,0 chr1 16383364 . A . LowGQ END=16383365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,9:40:0:40:0,0,804:112,0,255:30,0 chr1 16383366 . G . PASS END=16383366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:96:40:0,96,1440:0,103,255:31,0 chr1 16383367 . A . LowGQ END=16383368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,8:40:0:39:0,0,898:104,0,255:32,0 chr1 16383369 . G . PASS END=16383369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1319:0,87,255:33,0 chr1 16383370 . A . LowGQ END=16383372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,7:40:0:40:0,0,863:40,0,255:34,0 chr1 16383373 . G . PASS END=16383373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1319:0,73,255:34,0 chr1 16383374 . C . LowGQ END=16383378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,7:41:0:41:0,0,997:0,0,255:37,0 chr1 16383379 . T . PASS END=16383379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:37:41:0,37,1349:0,37,255:37,0 chr1 16383380 . C . LowGQ END=16383380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,7:41:0:41:0,0,1047:52,0,255:33,0 chr1 16383381 . C . PASS END=16383381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:12:41:0,12,1255:0,12,255:36,0 chr1 16383382 . A . PASS END=16383383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:21:41:0,21,1238:0,21,255:38,0 chr1 16383384 . C . PASS END=16383385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1288:0,51,255:37,0 chr1 16383386 . T . PASS END=16383386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:12:41:0,12,1241:0,12,255:36,0 chr1 16383387 . G . PASS END=16383388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1313:0,84,255:38,0 chr1 16383389 . C . PASS END=16383389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1304:0,51,255:36,0 chr1 16383390 . A . PASS END=16383390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1374:0,68,255:38,0 chr1 16383391 . A . PASS END=16383391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:16:42:0,16,1318:0,16,255:38,0 chr1 16383392 . A . PASS END=16383393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1285:0,70,255:39,0 chr1 16383394 . C . PASS END=16383394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:7:42:0,7,1196:0,7,255:36,0 chr1 16383395 . C . PASS END=16383395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:24:42:0,24,1324:0,24,255:37,0 chr1 16383396 . G . PASS END=16383396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1474:0,110,255:38,0 chr1 16383397 . C . PASS END=16383397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1413:0,49,255:38,0 chr1 16383398 . C . PASS END=16383398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1415:0,87,255:39,0 chr1 16383399 . A . PASS END=16383399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:39,0 chr1 16383400 . G . PASS END=16383400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:27:44:0,27,1229:0,27,255:37,0 chr1 16383401 . C . PASS END=16383401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1449:0,60,255:40,0 chr1 16383402 . C . LowGQ END=16383402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:0:44:0,0,1296:31,0,255:38,0 chr1 16383403 . C . PASS END=16383407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:43:0,81,1362:0,81,255:40,0 chr1 16383408 . G . PASS END=16383408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:7:43:0,7,1246:0,7,255:37,0 chr1 16383409 . T . PASS END=16383410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1404:0,79,255:40,0 chr1 16383411 . A . PASS END=16383411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 16383682 . G C, 23.92 PASS DP=51;MQ=60.02;MQRankSum=0.573;ReadPosRankSum=-0.465;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,13,0:0.255,0.000:51:17,5,0:21,8,0:24:59,0,46,423,1351,1774:255,0,255:39,0:2.3923e+01,1.7693e-02,4.8668e+01,4.2314e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,17,8,5:20,18,6,7 chr1 16383683 . C . PASS END=16383741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,126,255:40,0 chr1 16383742 . C G, 46.40 PASS DP=67;MQ=69.75;MQRankSum=-1.008;ReadPosRankSum=-0.621;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,45,0:0.672,0.000:67:9,22,0:13,23,0:38:81,0,35,1598,742,2340:255,0,255:22,0:4.6401e+01,7.2849e-04,3.8391e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,17,28:10,12,22,23 chr1 16383743 . C . PASS END=16383780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,128,255:40,0 chr1 16384932 . T . LowGQ END=16384932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,218:7,0,225:7,0 chr1 16384933 . C . PASS END=16384934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 16384935 . G . PASS END=16384935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 16384936 . T . PASS END=16384936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,286:0,24,255:8,0 chr1 16384937 . T . PASS END=16384937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 16384938 . A . PASS END=16384940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 16384941 . G . LowGQ END=16384942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,200:0,0,209:7,0 chr1 16384943 . A . PASS END=16384943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 16384944 . C . LowGQ END=16384944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:31,0,209:6,0 chr1 16384945 . A . PASS END=16384945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 16384946 . C . LowGQ END=16384946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:7,0 chr1 16384947 . C . PASS END=16384947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 16384948 . T . LowGQ END=16384948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:7,0 chr1 16384949 . C . PASS END=16384949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 16384950 . G . LowGQ END=16384950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr1 16384951 . T . PASS END=16384952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 16384953 . C . PASS END=16384953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 16384954 . T . PASS END=16384954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 16384955 . C . PASS END=16384961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 16384962 . G . PASS END=16384963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16384964 . G . PASS END=16384964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 16384965 . G . PASS END=16384968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16384969 . C . PASS END=16384969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 16384970 . C . PASS END=16384972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16384973 . T . PASS END=16384973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 16384974 . G . PASS END=16384975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16384976 . C . PASS END=16384985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,297:0,30,255:11,0 chr1 16384986 . G T, 29.08 PASS DP=11;MQ=54.42;MQRankSum=1.106;ReadPosRankSum=0.715;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:8,3,0:0.273,0.000:11:4,2,0:4,1,0:29:64,0,41,107,286,394:83,0,255:8,0:2.9082e+01,5.5367e-03,4.4131e+01,1.0733e+02,3.2113e+02,3.9668e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,3,0:3,5,2,1:16384986 chr1 16384987 . A . PASS END=16384987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 16384988 . G . PASS END=16384997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 16384998 . G C, 28.77 PASS DP=12;MQ=54.64;MQRankSum=1.109;ReadPosRankSum=0.185;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:9,3,0:0.250,0.000:12:4,2,0:5,1,0:29:64,0,38,164,164,164:80,0,255:7,0:2.8769e+01,6.1054e-03,4.1131e+01,1.6354e+02,1.9831e+02,1.6655e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,5,3,0:3,6,2,1:16384986 chr1 16384999 . G A, 28.77 PASS DP=12;MQ=54.64;MQRankSum=1.109;ReadPosRankSum=0.185;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:9,3,0:0.250,0.000:12:4,2,0:5,1,0:29:64,0,38,164,164,164:80,0,255:7,0:2.8769e+01,6.1054e-03,4.1131e+01,1.6354e+02,1.9831e+02,1.6655e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,5,3,0:3,6,2,1:16384986 chr1 16385000 . G . PASS END=16385000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:9,0 chr1 16385001 . G . PASS END=16385005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:12,0 chr1 16385006 . T . PASS END=16385006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 16385007 . C . PASS END=16385018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:13,0 chr1 16385019 . T . PASS END=16385041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 16385042 . G A, 35.34 PASS DP=16;MQ=49.21;MQRankSum=0.910;ReadPosRankSum=2.850;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,4,0:0.250,0.000:16:3,1,0:9,3,0:35:70,0,41,143,400,543:107,0,255:11,0:3.5339e+01,1.4385e-03,4.4126e+01,1.4304e+02,4.3492e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,3,1:5,7,0,4 chr1 16385043 . C . PASS END=16385079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr1 16385080 . C . PASS END=16385080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 16385081 . C . PASS END=16385081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 16385082 . A . PASS END=16385088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 16385089 . C . PASS END=16385089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 16385090 . T . PASS END=16385091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 16385092 . G . PASS END=16385092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 16385093 . G . PASS END=16385093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 16385094 . G . PASS END=16385098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 16385099 . C . PASS END=16385099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 16385100 . C . PASS END=16385130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:18,0 chr1 16385131 . C A, 20.23 PASS DP=16;MQ=39.74;MQRankSum=1.637;ReadPosRankSum=0.061;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,4,0:0.250,0.000:16:3,1,0:9,3,0:20:55,0,39,114,429,544:85,0,255:12,0:2.0232e+01,4.1636e-02,4.2042e+01,1.1438e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,0,4:5,7,3,1 chr1 16385132 . T . PASS END=16385142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 16385143 . A . PASS END=16385143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 16385144 . A . PASS END=16385148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:17,0 chr1 16385149 . T . PASS END=16385149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 16385150 . G . PASS END=16385157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr1 16385158 . T . PASS END=16385167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 16385168 . A . PASS END=16385169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:13:0,27,405:0,39,255:9,0 chr1 16385170 . G . PASS END=16385172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 16385173 . C . PASS END=16385174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16385175 . G A, 34.34 PASS DP=11;MQ=41.15;MQRankSum=-1.246;ReadPosRankSum=-0.278;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,7,0:0.636,0.000:11:3,1,0:1,6,0:33:69,0,38,250,143,393:238,0,122:4,0:3.4335e+01,1.9849e-03,4.0535e+01,2.5037e+02,1.7790e+02,3.9650e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,1,6:3,1,5,2 chr1 16385176 . C . PASS END=16385188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 16385189 . C . PASS END=16385192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:8:0,15,225:0,24,255:6,0 chr1 16385193 . A . PASS END=16385199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,255:3,0 chr1 16385200 . A . PASS END=16385212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 16385989 . C . PASS END=16385993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,576:0,40,255:19,0 chr1 16385994 . A . PASS END=16386001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,679:0,63,255:21,0 chr1 16386002 . G . PASS END=16386002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:20,0 chr1 16386003 . A . PASS END=16386004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 16386005 . G . PASS END=16386005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 16386006 . C . PASS END=16386007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 16386008 . T C, 49.60 PASS DP=21;MQ=97.68;MQRankSum=1.584;ReadPosRankSum=2.429;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,11,0:0.524,0.000:21:2,6,0:8,5,0:47:84,0,48,369,329,698:255,0,242:9,0:4.9600e+01,8.2577e-05,5.0954e+01,3.6922e+02,3.6361e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,2,5,6:4,6,8,3 chr1 16386009 . T . PASS END=16386009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,621:0,8,255:19,0 chr1 16386010 . G . PASS END=16386010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 16386011 . G . PASS END=16386011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr1 16386012 . G . PASS END=16386013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 16386014 . G . PASS END=16386014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 16386015 . C . PASS END=16386017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 16386018 . T . PASS END=16386020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 16386021 . T . PASS END=16386021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 16386022 . C . PASS END=16386022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:20,0 chr1 16386023 . G . PASS END=16386028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 16386029 . C . PASS END=16386029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr1 16386030 . A . PASS END=16386030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16386031 . G . PASS END=16386031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 16386032 . C . PASS END=16386033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16386034 . C . PASS END=16386035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,753:0,49,255:19,0 chr1 16386036 . T . PASS END=16386036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:18,0 chr1 16386037 . C . PASS END=16386039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,686:0,49,255:19,0 chr1 16386040 . C . PASS END=16386040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,645:0,11,255:18,0 chr1 16386041 . G . PASS END=16386045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,639:0,46,255:19,0 chr1 16386046 . G . PASS END=16386056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:19,0 chr1 16386057 . G . PASS END=16386057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:19,0 chr1 16386058 . C . PASS END=16386076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:18:0,46,676:0,46,255:18,0 chr1 16386077 . G . PASS END=16386077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 16386078 . A . PASS END=16386095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:18,0 chr1 16386096 . A . PASS END=16386096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 16386097 . C . PASS END=16386097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 16386098 . C . PASS END=16386098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 16386099 . C . PASS END=16386099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 16386364 . C . PASS END=16386371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 16386372 . A . PASS END=16386375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 16386376 . G . PASS END=16386376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 16386377 . G . PASS END=16386378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 16386379 . C . PASS END=16386382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 16386383 . A . PASS END=16386387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16386388 . G . PASS END=16386411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 16386412 . G . PASS END=16386415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 16386416 . G A, 45.91 PASS DP=15;MQ=102.32;MQRankSum=-0.058;ReadPosRankSum=1.447;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:4,6,0:4,1,0:45:81,0,49,242,286,529:218,0,255:7,0:4.5905e+01,1.3953e-04,5.1900e+01,2.4243e+02,3.2085e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,5,2:4,4,6,1 chr1 16386417 . T . PASS END=16386419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16386420 . T . PASS END=16386433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:10:0,27,405:0,30,255:9,0 chr1 16386434 . C . PASS END=16386446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 16386447 . G C, 72.56 PASS DP=10;MQ=73.77;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,5,0:0,5,0:27:110,30,0,388,30,388:255,30,0:0,0:7.2556e+01,2.7106e+01,8.4683e-03,3.8472e+02,6.1876e+01,3.8772e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,5:0,0,2,8 chr1 16386448 . G . PASS END=16386449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 16386450 . T . PASS END=16386450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 16386451 . G . PASS END=16386475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 16386476 . G . PASS END=16386484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16386485 . C . PASS END=16386486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16386487 . C . PASS END=16386493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 16386494 . T . PASS END=16386511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 16386512 . C . PASS END=16386546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 16388594 . C . PASS END=16388598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16388599 . A . PASS END=16388613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:17,0 chr1 16388614 . A . PASS END=16388641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:17,0 chr1 16388642 . G . PASS END=16388642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 16388643 . G . PASS END=16388645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 16388646 . T C, 93.97 PASS DP=17;MQ=66.87;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,8,0:0,9,0:48:132,51,0,659,51,659:255,51,0:0,0:9.3965e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,8:0,0,8,9 chr1 16388647 . C . PASS END=16388672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:18,0 chr1 16388673 . G . PASS END=16388673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 16388674 . G . PASS END=16388676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:18,0 chr1 16388677 . T . PASS END=16388677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 16388678 . G . PASS END=16388682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 16388683 . C . PASS END=16388687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 16388994 . C . PASS END=16388997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 16388998 . C . PASS END=16388998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:30,0 chr1 16388999 . A . PASS END=16389000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1211:0,88,255:32,0 chr1 16389001 . G . PASS END=16389001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 16389002 . G . PASS END=16389005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:33:0,86,1181:0,86,255:32,0 chr1 16389006 . C . PASS END=16389006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:28,0 chr1 16389007 . C . PASS END=16389007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1039:0,49,255:27,0 chr1 16389008 . A . PASS END=16389009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:30,0 chr1 16389010 . C . PASS END=16389010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:28,0 chr1 16389011 . A . PASS END=16389011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:29,0 chr1 16389012 . G . PASS END=16389012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1045:0,27,255:27,0 chr1 16389013 . A . PASS END=16389017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1095:0,82,255:31,0 chr1 16389018 . C . PASS END=16389018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,1006:0,43,255:28,0 chr1 16389019 . A . PASS END=16389020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 16389021 . C . PASS END=16389021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,986:0,16,255:29,0 chr1 16389022 . T . PASS END=16389022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 16389023 . G . PASS END=16389023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:15:31:0,15,953:0,15,255:28,0 chr1 16389024 . T . PASS END=16389024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1028:0,93,255:31,0 chr1 16389025 . T . PASS END=16389025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr1 16389026 . T C, 49.06 PASS DP=31;MQ=115.81;MQRankSum=-1.048;ReadPosRankSum=4.724;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,15,0:0.484,0.000:31:9,6,0:7,9,0:47:84,0,49,528,543,1072:255,0,255:17,0:4.9055e+01,7.9730e-05,5.2250e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,10,5:8,8,5,10 chr1 16389027 . G . PASS END=16389028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:31:0,24,961:0,24,255:29,0 chr1 16389029 . C . LowGQ END=16389029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,922:7,0,255:28,0 chr1 16390016 . C . PASS END=16390030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 16390031 . G . PASS END=16390043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,908:0,69,255:26,0 chr1 16390044 . G . PASS END=16390053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr1 16390054 . G . PASS END=16390054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 16390055 . G . PASS END=16390058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16390059 . G . PASS END=16390065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 16390066 . G . PASS END=16390068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16390069 . C . PASS END=16390090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,925:0,64,255:26,0 chr1 16390091 . C . PASS END=16390091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 16390092 . T . PASS END=16390115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:23,0 chr1 16390116 . G . PASS END=16390131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,652:0,50,255:18,0 chr1 16399916 . C . PASS END=16399916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16399917 . T . PASS END=16399917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 16399918 . C . PASS END=16399919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 16399920 . C . PASS END=16399920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 16399921 . G . PASS END=16399922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 16399923 . C . PASS END=16399923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 16399924 . A . PASS END=16399932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 16399933 . C . PASS END=16399937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 16450865 . C . PASS END=16450865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr1 16450920 . G . PASS END=16450920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr1 16451085 . C . PASS END=16451086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 16451167 . G . PASS END=16451167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 16451426 . G . PASS END=16451426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16451437 . C . PASS END=16451437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16451486 . C . PASS END=16451486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr1 16451710 . T . PASS END=16451722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,730:0,60,255:25,0 chr1 16451723 . C . PASS END=16451729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:30,0 chr1 16451730 . T . PASS END=16451730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 16451731 . G . PASS END=16451736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 16451737 . C . PASS END=16451737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 16451738 . T . PASS END=16451786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1117:0,83,255:34,0 chr1 16451787 . G . PASS END=16451787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:26,0 chr1 16451788 . C . PASS END=16451792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:28,0 chr1 16451793 . G . PASS END=16451795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,86,255:26,0 chr1 16451796 . C . PASS END=16451798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 16451799 . C . PASS END=16451799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 16451800 . A . PASS END=16451801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16451802 . T . PASS END=16451802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,864:0,54,255:25,0 chr1 16451803 . C . PASS END=16451804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 16451805 . T . PASS END=16451805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr1 16451806 . C . PASS END=16451806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,780:0,33,255:25,0 chr1 16451807 . T . PASS END=16451808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr1 16451809 . G . PASS END=16451809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:26,0 chr1 16451810 . A . PASS END=16451810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 16451811 . T . PASS END=16451811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 16451812 . G . PASS END=16451812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 16451813 . T . PASS END=16451813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,803:0,33,255:25,0 chr1 16451814 . C . PASS END=16451815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 16451824 . C . PASS END=16451824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,803:0,48,255:20,0 chr1 16455929 . T . PASS END=16456067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:32:0,84,1210:0,96,255:40,0 chr1 16456068 . G . PASS END=16456084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,945:0,69,255:26,0 chr1 16456721 . C . PASS END=16456765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:19,0 chr1 16456766 . A . PASS END=16456767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 16456768 . G . PASS END=16456770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 16456771 . C . PASS END=16456789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 16456790 . A . PASS END=16456791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,426:0,22,255:11,0 chr1 16456792 . G . PASS END=16456794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 16456795 . A . PASS END=16456795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 16456796 . G . PASS END=16456841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 16456842 . T . PASS END=16456843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16456844 . A . PASS END=16456852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 16456853 . A . PASS END=16456856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16456857 . C . PASS END=16456864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 16456865 . C . PASS END=16456866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16456867 . G . PASS END=16456869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16456870 . C . PASS END=16456879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:9,0 chr1 16456880 . G . PASS END=16456880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 16456881 . G . PASS END=16456891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 16456892 . C . PASS END=16456907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 16456908 . T . PASS END=16456913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 16456914 . C . PASS END=16456914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 16458216 . C . PASS END=16458224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,545:0,48,255:17,0 chr1 16458225 . G . PASS END=16458255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,584:0,44,255:19,0 chr1 16458256 . G . PASS END=16458263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:22,0 chr1 16458264 . C . PASS END=16458264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:20,0 chr1 16458265 . T . PASS END=16458282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 16458283 . A . PASS END=16458285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 16458286 . C . PASS END=16458292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16458293 . C . PASS END=16458310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 16458311 . A . PASS END=16458315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 16458316 . C . PASS END=16458335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 16458336 . G . PASS END=16458339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr1 16458340 . G . PASS END=16458342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 16458343 . C . PASS END=16458343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 16458344 . A . PASS END=16458351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 16458352 . G . PASS END=16458358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 16458359 . T . PASS END=16458359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 16458360 . G . PASS END=16458365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 16458559 . A . PASS END=16458568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,970:0,65,255:26,0 chr1 16458569 . T . PASS END=16458569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 16458570 . A . PASS END=16458570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16458571 . G . PASS END=16458573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16458574 . G . PASS END=16458575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16458576 . C . PASS END=16458719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1149:0,82,255:40,0 chr1 16458720 . C . PASS END=16458723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:36:0,78,1170:0,108,255:26,0 chr1 16458724 . C . PASS END=16458736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:29,0 chr1 16458737 . A . PASS END=16458738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16458739 . C . PASS END=16458743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 16458744 . G . PASS END=16458756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,71,255:26,0 chr1 16458757 . G . PASS END=16458757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:23,0 chr1 16458758 . C . PASS END=16458768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:24,0 chr1 16458873 . C . PASS END=16458873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16458874 . C . PASS END=16458878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16458879 . G . PASS END=16458879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 16458880 . A . PASS END=16458888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1052:0,90,255:31,0 chr1 16458889 . A . PASS END=16458889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 16458890 . G . PASS END=16458921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1082:0,80,255:34,0 chr1 16458922 . A . PASS END=16458922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 16458923 . T . PASS END=16458931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 16458932 . T . PASS END=16458932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 16458933 . G . PASS END=16458934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16459675 . A . PASS END=16459682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:29,0 chr1 16459683 . A . PASS END=16459685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 16459686 . A . PASS END=16459863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:31:0,84,1260:0,93,255:40,0 chr1 16459976 . C . PASS END=16459981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 16459982 . C . PASS END=16459982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 16459983 . G . PASS END=16459987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,992:0,78,255:26,0 chr1 16459988 . C . PASS END=16459988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 16459989 . C . PASS END=16459989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16459990 . T . PASS END=16459992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16459993 . T . PASS END=16459993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 16459994 . G . PASS END=16459997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 16459998 . A . PASS END=16459999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 16460000 . T . PASS END=16460011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr1 16460012 . G . PASS END=16460012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 16460013 . A . PASS END=16460017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 16460018 . T . PASS END=16460018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr1 16460019 . C . PASS END=16460020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 16460021 . C . PASS END=16460021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 16460022 . G . PASS END=16460023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 16460024 . T . PASS END=16460024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 16460025 . A . PASS END=16460025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:25,0 chr1 16460026 . G . PASS END=16460028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16460029 . A . PASS END=16460029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:24,0 chr1 16460030 . A . PASS END=16460040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,923:0,64,255:26,0 chr1 16460041 . G . PASS END=16460042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16460043 . C . PASS END=16460059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1030:0,68,255:25,0 chr1 16460060 . A . PASS END=16460060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:19,0 chr1 16460061 . T . PASS END=16460066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 16460067 . G . PASS END=16460072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 16460073 . C . PASS END=16460073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16460074 . A . PASS END=16460075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 16460076 . G . PASS END=16460076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 16460077 . T . PASS END=16460081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 16460082 . C . PASS END=16460086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 16460087 . G . PASS END=16460101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:19,0 chr1 16460355 . C . PASS END=16460387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,782:0,62,255:26,0 chr1 16460388 . G . PASS END=16460388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 16460389 . G . PASS END=16460407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 16460408 . C . PASS END=16460410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 16460656 . T . PASS END=16460696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1217:0,86,255:38,0 chr1 16460697 . G . PASS END=16460705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:38:0,63,945:0,98,255:23,0 chr1 16460706 . G . PASS END=16460707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:57:38:0,57,855:0,114,255:19,0 chr1 16460963 . C . PASS END=16460973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 16460974 . A . PASS END=16460974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 16460975 . A . PASS END=16460985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr1 16460986 . T . PASS END=16460986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 16460987 . C . PASS END=16460996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,978:0,78,255:26,0 chr1 16460997 . C . PASS END=16461053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1116:0,86,255:36,0 chr1 16461054 . C . PASS END=16461054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:30,0 chr1 16461055 . C . PASS END=16461062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 16461530 . C . PASS END=16461559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,684:0,57,255:19,0 chr1 16461560 . C . PASS END=16461560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 16461561 . C . PASS END=16461580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 16461581 . G . PASS END=16461604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 16461605 . T . PASS END=16461608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 16461609 . T . PASS END=16461610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16461611 . G . PASS END=16461613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 16461614 . T . PASS END=16461614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16461615 . C . PASS END=16461620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 16461621 . C . PASS END=16461622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 16461623 . A . PASS END=16461627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 16461628 . G . PASS END=16461630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16461631 . C . PASS END=16461657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,50,255:19,0 chr1 16461658 . G . PASS END=16461664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr1 16461665 . T . PASS END=16461675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 16461676 . G . PASS END=16461684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 16462150 . C . PASS END=16462152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,894:0,64,255:26,0 chr1 16462153 . C . PASS END=16462155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 16462156 . G . PASS END=16462158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16462159 . G . PASS END=16462161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16462162 . A . PASS END=16462162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 16462163 . G . PASS END=16462179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1116:0,84,255:29,0 chr1 16462180 . C . PASS END=16462180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 16462181 . A . PASS END=16462186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 16462187 . C . PASS END=16462197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:26,0 chr1 16462198 . C . PASS END=16462198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,1 chr1 16462199 . G . PASS END=16462199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:11:28:0,11,934:0,11,255:22,1 chr1 16462200 . G . PASS END=16462200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr1 16462201 . G . PASS END=16462225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 16462226 . G . PASS END=16462226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 16462227 . A . PASS END=16462229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 16462230 . T . PASS END=16462230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 16462231 . G . PASS END=16462238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 16462239 . G . PASS END=16462242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 16462243 . C . PASS END=16462245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16462246 . C . PASS END=16462264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 16462265 . T . PASS END=16462265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:13,0 chr1 16464348 . C . PASS END=16464350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 16464351 . T . PASS END=16464351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 16464352 . C . PASS END=16464355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 16464356 . T . PASS END=16464356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 16464357 . T . PASS END=16464363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16464364 . G . PASS END=16464364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 16464365 . A . PASS END=16464375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr1 16464376 . A . PASS END=16464379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 16464380 . A . PASS END=16464380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 16464381 . A . PASS END=16464387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 16464388 . G . PASS END=16464390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16464391 . G . PASS END=16464391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16464392 . G . PASS END=16464392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 16464393 . T . PASS END=16464396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16464397 . C . PASS END=16464419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 16464420 . C . PASS END=16464426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 16464427 . G . PASS END=16464427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 16464428 . G . PASS END=16464429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 16464430 . G . PASS END=16464441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 16464442 . C . PASS END=16464442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 16464443 . A . PASS END=16464448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 16464449 . G . PASS END=16464449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 16464450 . G . PASS END=16464470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 16464471 . C . PASS END=16464472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16464473 . C . PASS END=16464475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16464476 . G . PASS END=16464477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16464478 . G . PASS END=16464480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 16464481 . G . PASS END=16464481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:23,0 chr1 16464482 . G . PASS END=16464496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,962:0,78,255:26,0 chr1 16464497 . G . PASS END=16464499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 16464500 . T . PASS END=16464531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 16464532 . G . PASS END=16464532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 16464533 . C . PASS END=16464544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 16464545 . T . PASS END=16464566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr1 16464567 . T . PASS END=16464567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 16464568 . G . PASS END=16464568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 16464569 . A . PASS END=16464569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 16464570 . C . PASS END=16464591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,625:0,51,255:19,0 chr1 16464592 . G . PASS END=16464598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr1 16464599 . C . PASS END=16464612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 16464613 . C . PASS END=16464613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 16464614 . G . PASS END=16464621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 16464622 . C . PASS END=16464624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16464625 . C . PASS END=16464631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16464632 . T . PASS END=16464632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 16464633 . T . PASS END=16464635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 16464636 . C . PASS END=16464636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 16464637 . A . PASS END=16464640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 16464641 . A . PASS END=16464643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16464644 . C . PASS END=16464645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16464646 . C . PASS END=16464646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 16464647 . A . PASS END=16464680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 16464770 . G . PASS END=16464791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 16464792 . G . PASS END=16464815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:22,0 chr1 16464816 . T . PASS END=16464819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16464820 . T . PASS END=16464826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 16464827 . C . PASS END=16464828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 16464829 . C . PASS END=16464841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 16464842 . C . PASS END=16464850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 16464851 . A . PASS END=16464857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16464858 . C . PASS END=16464904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,681:0,41,255:19,0 chr1 16464905 . T . PASS END=16464905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 16464906 . A . PASS END=16464920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr1 16464921 . G . PASS END=16464921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 16464922 . C . PASS END=16464925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 16474873 . C . PASS END=16474885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:13,0 chr1 16474886 . C . PASS END=16474892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 16474893 . T . PASS END=16474901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 16474902 . C . PASS END=16474915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 16474916 . G . PASS END=16474953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:18,0 chr1 16474954 . C . PASS END=16474954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:17,0 chr1 16474955 . A . PASS END=16474957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr1 16474958 . G . PASS END=16474986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,941:0,66,255:26,0 chr1 16474987 . G . PASS END=16474987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 16474988 . C . PASS END=16474993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 16474994 . G . PASS END=16475009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,978:0,78,255:26,0 chr1 16475010 . G . PASS END=16475055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1078:0,84,255:35,0 chr1 16475056 . T . PASS END=16475056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1141:0,50,255:31,0 chr1 16475057 . C . PASS END=16475135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1140:0,83,255:32,0 chr1 16475136 . G . PASS END=16475156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 16475157 . A . PASS END=16475158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 16475159 . G . PASS END=16475160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 16475161 . A . PASS END=16475164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 16475165 . G . PASS END=16475167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 16475168 . T . PASS END=16475168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 16475169 . T . PASS END=16475169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16475170 . T . PASS END=16475171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16475172 . C . PASS END=16475178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 16475179 . G . PASS END=16475182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 16475183 . C . PASS END=16475186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 16475187 . A . PASS END=16475187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 16475188 . C . PASS END=16475189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16475190 . G . PASS END=16475190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 16475191 . A . PASS END=16475199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:24,0 chr1 16475200 . C . PASS END=16475200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 16475201 . C . PASS END=16475235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,770:0,66,255:24,0 chr1 16475236 . T . PASS END=16475236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 16475237 . G . PASS END=16475265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,890:0,72,255:26,0 chr1 16475266 . T . PASS END=16475270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 16475271 . A . PASS END=16475297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,762:0,63,255:24,0 chr1 16475298 . T . PASS END=16475298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 16475299 . T . PASS END=16475322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,878:0,61,255:24,0 chr1 16475323 . C . PASS END=16475324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 16475325 . G . PASS END=16475325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16475326 . C . PASS END=16475336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 16475337 . T . PASS END=16475337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:16,0 chr1 16475338 . T . PASS END=16475373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,54,255:19,0 chr1 16475374 . A . PASS END=16475374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 16475375 . G . PASS END=16475375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 16475376 . C . PASS END=16475384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 16475385 . T . PASS END=16475385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 16475386 . C . PASS END=16475410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 16475411 . G . PASS END=16475411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 16475412 . A . PASS END=16475412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 16475413 . A . PASS END=16475415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16475416 . T . PASS END=16475417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16475418 . C . PASS END=16475425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 16475426 . C . PASS END=16475427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 16475428 . C . PASS END=16475475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:33,0 chr1 16475476 . A . PASS END=16475476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 16475477 . C . PASS END=16475499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1119:0,93,255:34,0 chr1 16475500 . T . PASS END=16475500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr1 16475501 . G . PASS END=16475533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:32,0 chr1 16475534 . C . PASS END=16475540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,1002:0,70,255:26,0 chr1 16475541 . C . PASS END=16475541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:24,0 chr1 16475542 . A . PASS END=16475542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 16477391 . C . PASS END=16477393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 16477394 . T . PASS END=16477394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,578:0,24,255:17,0 chr1 16477395 . T . PASS END=16477399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16477400 . A . PASS END=16477427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:22,0 chr1 16477428 . C . PASS END=16477428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 16477429 . C . PASS END=16477436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 16477437 . G . PASS END=16477458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr1 16479608 . C . PASS END=16479618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:12:56:0,12,180:0,141,255:4,0 chr1 16479619 . T . PASS END=16479620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:9:57:0,9,135:0,108,255:3,2 chr1 16479621 . G . PASS END=16479624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:12:58:0,12,180:0,135,255:4,0 chr1 16479625 . GAA GA,G, 153.17 PASS DP=59;MQ=250.00;MQRankSum=3.302;ReadPosRankSum=-0.256;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:4,52,3,0:0.881,0.051,0.000:59:2,30,2,0:2,22,1,0:103:169,106,0,609,131,191,709,709,709,709:255,0,20:6,84:1.5317e+02,1.0317e+02,0.0000e+00,4.5000e+02,1.4104e+02,1.9104e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,13.00,16.01,13.00,26.00,16.01,34.77,47.77,47.77,37.78:3,1,36,19:3,1,27,28 chr1 16479626 . A . LowGQ END=16479627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,86:91:0:62:0,0,0:255,0,0:40,84 chr1 16479628 . A . PASS END=16479671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:59:0,83,1800:0,83,255:40,0 chr1 16479672 . C . PASS END=16479699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:51:0,120,1800:0,140,255:40,0 chr1 16482343 . C . PASS END=16482343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 16482344 . T . PASS END=16482344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16482345 . T . PASS END=16482345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 16482346 . C . PASS END=16482346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16482347 . C . PASS END=16482347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:14,0 chr1 16482348 . T . PASS END=16482352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 16482353 . C . PASS END=16482353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr1 16482354 . T . PASS END=16482364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:15,0 chr1 16482365 . G . PASS END=16482365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 16482366 . G . PASS END=16482370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 16482371 . G . PASS END=16482372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 16482373 . C . PASS END=16482374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 16482375 . A . PASS END=16482376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 16482377 . C . PASS END=16482377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 16482378 . G . PASS END=16482379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:15:0,21,315:0,45,255:7,0 chr1 16482380 . A . PASS END=16482380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,378:0,12,255:6,0 chr1 16482381 . C . PASS END=16482382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:15:0,21,315:0,45,255:7,0 chr1 16482383 . G . PASS END=16482383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:8,0 chr1 16482384 . C . PASS END=16482390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:36:18:0,36,540:0,40,255:12,0 chr1 16482391 . G . LowGQ END=16482391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,488:29,0,255:11,0 chr1 16482392 . C . PASS END=16482393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:14:0,36,540:0,42,255:12,0 chr1 16482394 . G . PASS END=16482394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 16482395 . G . PASS END=16482407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 16482408 . C . PASS END=16482408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 16482409 . G . PASS END=16482413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 16482414 . G . PASS END=16482416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 16482417 . T . PASS END=16482417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 16482418 . G . PASS END=16482418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 16482419 . G . PASS END=16482426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16482427 . T . PASS END=16482427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:11,0 chr1 16482508 . C . PASS END=16482508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16482579 . A . PASS END=16482579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 16525082 . T . PASS END=16525088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 16525089 . G . PASS END=16525092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:19,1 chr1 16525093 . C . PASS END=16525093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 16525094 . C . PASS END=16525095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 16525096 . C . PASS END=16525102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:23,0 chr1 16525103 . T . PASS END=16525103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 16525104 . T . PASS END=16525108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 16525109 . G . PASS END=16525109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 16525110 . G . PASS END=16525122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,862:0,72,255:26,0 chr1 16525123 . C . PASS END=16525160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1003:0,81,255:30,0 chr1 16525161 . A . PASS END=16525161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:29,0 chr1 16525162 . G . PASS END=16525162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16525163 . G . PASS END=16525184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:25,0 chr1 16525185 . G . PASS END=16525187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 16525188 . T . PASS END=16525195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 16525196 . C . PASS END=16525207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,628:0,46,255:19,0 chr1 16525208 . A . PASS END=16525208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,637:0,8,255:17,0 chr1 16525209 . C . PASS END=16525214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:18,0 chr1 16525215 . G . PASS END=16525215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:16,0 chr1 16525216 . C . PASS END=16525218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 16525219 . G . PASS END=16525219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 16525220 . G . PASS END=16525228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr1 16525229 . T . PASS END=16525230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 16525231 . C . PASS END=16525235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 16525236 . C . PASS END=16525238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 16525239 . C . PASS END=16525239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 16525645 . C . PASS END=16525646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16525647 . T . PASS END=16525647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 16525648 . C . PASS END=16525650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr1 16525651 . T . PASS END=16525651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 16525652 . G . PASS END=16525749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1141:0,80,255:40,0 chr1 16528277 . C . PASS END=16528338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr1 16528339 . C . PASS END=16528339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16528340 . A . PASS END=16528351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 16528352 . C . PASS END=16528354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 16528355 . T . PASS END=16528356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 16528911 . T . PASS END=16528932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 16528933 . A . PASS END=16528933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 16528934 . C . PASS END=16528958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:19,0 chr1 16528959 . A . PASS END=16529053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,739:0,63,255:24,0 chr1 16529054 . G . PASS END=16529054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 16529055 . G . PASS END=16529065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 16529066 . T . PASS END=16529069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 16531254 . T . PASS END=16531257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 16531258 . T . PASS END=16531263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 16531264 . G . PASS END=16531264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 16531265 . A . PASS END=16531266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16531267 . A . PASS END=16531267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,607:0,8,255:19,0 chr1 16531268 . G . PASS END=16531268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16531269 . A . PASS END=16531269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,681:0,47,255:19,0 chr1 16531270 . G . PASS END=16531276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16531277 . G . PASS END=16531277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16531278 . C . PASS END=16531283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 16531284 . T . PASS END=16531284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 16531285 . T . PASS END=16531294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,892:0,61,255:25,0 chr1 16531295 . G . PASS END=16531385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1070:0,83,255:32,0 chr1 16531386 . C . PASS END=16531387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16531388 . G . PASS END=16531388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16531389 . C . PASS END=16531410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 16531411 . A . PASS END=16531412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 16531413 . A . PASS END=16531414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16531582 . C . PASS END=16531591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:36:0,98,1360:0,98,255:37,0 chr1 16531592 . A . PASS END=16531592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 16531593 . A . PASS END=16531606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1283:0,97,255:39,0 chr1 16531607 . C . PASS END=16531607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr1 16531608 . T . PASS END=16531651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1260:0,93,255:40,0 chr1 16531652 . G . PASS END=16531659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1070:0,77,255:27,0 chr1 16531660 . C . PASS END=16531669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16531670 . A . PASS END=16531671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,969:0,65,255:27,0 chr1 16531846 . C . PASS END=16531872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1086:0,80,255:30,0 chr1 16531873 . G . PASS END=16531873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 16531874 . G . PASS END=16531885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1097:0,80,255:31,0 chr1 16531886 . T . PASS END=16531886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:28,0 chr1 16531887 . C . PASS END=16531887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 16531888 . T . PASS END=16531888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:30,0 chr1 16531889 . T . PASS END=16531914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:31,0 chr1 16531915 . G . PASS END=16531915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 16531916 . A . PASS END=16531920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16532033 . C . PASS END=16532044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,878:0,64,255:25,0 chr1 16532045 . C . PASS END=16532045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:24,0 chr1 16532046 . T . PASS END=16532048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16532049 . A . PASS END=16532057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 16532058 . A . PASS END=16532058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 16532059 . T . PASS END=16532086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,1003:0,80,255:32,0 chr1 16532087 . G . PASS END=16532087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 16532088 . G . PASS END=16532128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1139:0,80,255:32,0 chr1 16532129 . A . PASS END=16532162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 16532422 . C . PASS END=16532426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 16532427 . G . PASS END=16532427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 16532428 . C . PASS END=16532449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:18,0 chr1 16532450 . T . PASS END=16532451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 16532452 . G . PASS END=16532452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 16532453 . T . PASS END=16532453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 16532454 . A . PASS END=16532454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 16532455 . G . PASS END=16532458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 16532459 . T . PASS END=16532462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16532463 . T . PASS END=16532468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16532469 . C . PASS END=16532480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 16532481 . A . PASS END=16532481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 16532482 . G . PASS END=16532503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 16532504 . T . PASS END=16532506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 16532507 . T . PASS END=16532507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 16532508 . C . PASS END=16532513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 16532514 . C . PASS END=16532514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 16532515 . C . PASS END=16532518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16532519 . T . PASS END=16532519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 16532520 . C . PASS END=16532520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16532521 . G . PASS END=16532521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 16532522 . C . PASS END=16532539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 16532540 . A . PASS END=16532552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 16532553 . G . PASS END=16532553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 16532554 . C . PASS END=16532564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 16532565 . G . PASS END=16532566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16532567 . T . PASS END=16532578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 16532675 . C . PASS END=16532679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 16532680 . G . PASS END=16532680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 16532681 . C . PASS END=16532689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,709:0,66,255:22,0 chr1 16532690 . T . PASS END=16532690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:21,0 chr1 16532691 . T . PASS END=16532699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16532700 . G . PASS END=16532700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 16532701 . C . PASS END=16532703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr1 16532704 . T . PASS END=16532705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,634:0,52,255:22,0 chr1 16532706 . T . PASS END=16532710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 16532711 . A . PASS END=16532712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 16532713 . C . PASS END=16532714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 16532715 . G . PASS END=16532715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 16532716 . C . PASS END=16532716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 16532717 . C . PASS END=16532722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr1 16532723 . T . PASS END=16532724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 16532725 . G . PASS END=16532731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,833:0,72,255:24,0 chr1 16532732 . G . PASS END=16532732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 16532733 . C . PASS END=16532759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr1 16532760 . A . PASS END=16532760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:22,0 chr1 16532761 . G . PASS END=16532765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 16532766 . A . PASS END=16532770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:24,0 chr1 16532771 . T . PASS END=16532771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 16532772 . G . PASS END=16532773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 16532774 . C . PASS END=16532774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 16532775 . C . PASS END=16532775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 16532776 . C . PASS END=16532798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,651:0,41,255:19,0 chr1 16532799 . T . PASS END=16532800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 16532801 . T . PASS END=16532802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 16532803 . G A, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=2.069;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:5,2,0:3,7,0:48:85,0,50,322,257,579:255,0,237:8,0:5.0000e+01,6.6010e-05,5.2819e+01,3.2181e+02,2.9202e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,4,5:5,3,3,6 chr1 16532804 . G . PASS END=16532806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 16532807 . G . PASS END=16532807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr1 16532808 . C . PASS END=16532811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 16532812 . G . PASS END=16532812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 16532813 . G . PASS END=16532816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 16532817 . T . PASS END=16532817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 16532818 . G . PASS END=16532822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:15,0 chr1 16532823 . G . PASS END=16532823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 16532824 . C . PASS END=16532829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 16532830 . C . PASS END=16532830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 16532831 . T . PASS END=16532840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 16532841 . G . PASS END=16532841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 16532842 . G . PASS END=16532842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 16532843 . A . PASS END=16532843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 16532844 . G . PASS END=16532847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 16532848 . A G, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=1.164;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,10,0:0.667,0.000:15:3,3,0:2,7,0:45:85,0,44,185,185,185:255,0,141:5,0:5.0000e+01,1.3513e-04,4.6754e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,4,6,4:1,4,3,7 chr1 16532849 . C . PASS END=16532852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,511:0,42,255:14,0 chr1 16532853 . C . PASS END=16532854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16532855 . G . PASS END=16532855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,408:0,9,255:11,0 chr1 16532856 . G . PASS END=16532883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 16532884 . G . PASS END=16532884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 16532885 . G . PASS END=16532885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16532886 . A . PASS END=16532889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 16532890 . C . PASS END=16532890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 16532891 . C . PASS END=16532893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 16532894 . G . PASS END=16532894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 16532895 . C . PASS END=16532897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 16532898 . C . PASS END=16532899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 16532900 . C . PASS END=16532904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 16532905 . C . PASS END=16532905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr1 16532906 . C . PASS END=16532906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 16532907 . A . PASS END=16532914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 16532915 . G . PASS END=16532919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 16532920 . C . PASS END=16532920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 16532921 . C . PASS END=16532923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 16532924 . A . PASS END=16532924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 16532925 . C . PASS END=16532925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:7,0 chr1 16532926 . C . PASS END=16532926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 16532927 . T . PASS END=16532927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 16532928 . C . PASS END=16532930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 16532931 . G . PASS END=16532931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,231:0,7,231:7,0 chr1 16532932 . T . PASS END=16532936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:8,0 chr1 16532937 . G . PASS END=16532937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 16532938 . C . PASS END=16532942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 16532943 . T . PASS END=16532944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 16532945 . T . PASS END=16532945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 16532946 . C . PASS END=16532948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 16532949 . G . PASS END=16532949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,260:0,16,255:10,0 chr1 16532950 . C . PASS END=16532951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 16532952 . C . PASS END=16532952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 16532953 . C . PASS END=16532954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 16532955 . C . PASS END=16532966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 16532967 . C . PASS END=16532967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 16532968 . G . PASS END=16532969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 16532970 . C . PASS END=16532970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 16532971 . G . PASS END=16532971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 16532972 . G . PASS END=16532981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,554:0,51,255:17,0 chr1 16532982 . G . PASS END=16532982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 16532983 . C . PASS END=16532983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 16532984 . G . PASS END=16532984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 16532985 . A . PASS END=16533021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 16533022 . C T, 95.15 PASS DP=16;MQ=247.57;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,8,0:0,8,0:45:133,48,0,612,48,612:255,51,0:0,0:9.5153e+01,4.5153e+01,1.3254e-04,4.5000e+02,7.9923e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,14:0,0,8,8 chr1 16533023 . T . PASS END=16533034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 16533035 . C . PASS END=16533035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:13,0 chr1 16533036 . G . PASS END=16533036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16533037 . C . PASS END=16533038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:12,0 chr1 16533443 . C . PASS END=16533443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 16533444 . T . LowGQ END=16533444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:6,0 chr1 16533445 . C . PASS END=16533445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 16533446 . C . PASS END=16533449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,235:7,0 chr1 16533450 . A . PASS END=16533450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 16533451 . G . PASS END=16533451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 16533452 . C . LowGQ END=16533452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 16533453 . T . PASS END=16533453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:8,0 chr1 16533454 . T . PASS END=16533454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 16533455 . G . PASS END=16533461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 16533462 . C . PASS END=16533476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 16533477 . G . PASS END=16533477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 16533478 . C . PASS END=16533480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16533481 . G . PASS END=16533481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 16533482 . G . PASS END=16533485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16533486 . C . PASS END=16533494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,560:0,45,255:16,0 chr1 16533495 . C . PASS END=16533495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 16533496 . G . PASS END=16533509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,574:0,48,255:19,0 chr1 16533510 . T . PASS END=16533513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:24,0 chr1 16533514 . G . PASS END=16533514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 16533515 . C . PASS END=16533527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:25,0 chr1 16533528 . G . PASS END=16533531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 16533532 . A . PASS END=16533532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 16533533 . G . PASS END=16533535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 16533536 . T . PASS END=16533536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:26,0 chr1 16533537 . C . PASS END=16533537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16533538 . G . PASS END=16533538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 16533539 . C . PASS END=16533539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16533540 . G . PASS END=16533540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 16533541 . C . PASS END=16533548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 16533549 . T . PASS END=16533549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 16533550 . G . PASS END=16533558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 16533559 . A . PASS END=16533560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,862:0,64,255:26,0 chr1 16533561 . G . PASS END=16533562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16533563 . G . PASS END=16533563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 16533564 . C . PASS END=16533569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 16533570 . G . PASS END=16533570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr1 16533571 . G . PASS END=16533571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16533572 . G . PASS END=16533572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 16533573 . G . PASS END=16533573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16533574 . A . PASS END=16533578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,970:0,70,255:25,0 chr1 16533579 . T . PASS END=16533579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:24,0 chr1 16533580 . T . PASS END=16533596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,886:0,64,255:26,0 chr1 16533597 . G . PASS END=16533597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:24,0 chr1 16533598 . G . PASS END=16533608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:25,0 chr1 16533609 . G . PASS END=16533609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:21,0 chr1 16533610 . C . PASS END=16533629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,878:0,61,255:22,0 chr1 16533630 . G . PASS END=16533630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:18,0 chr1 16533631 . G . PASS END=16533635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 16533636 . T . PASS END=16533646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,775:0,50,255:19,0 chr1 16533647 . C . PASS END=16533647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 16533648 . T . PASS END=16533679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:19,0 chr1 16533680 . G . PASS END=16533685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:15:0,34,540:0,34,255:13,0 chr1 16533686 . G . PASS END=16533705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,349:0,27,255:9,0 chr1 16534017 . A . PASS END=16534017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 16534018 . G . PASS END=16534021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:17,0 chr1 16534022 . A . PASS END=16534022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:16,0 chr1 16534023 . G . PASS END=16534039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,635:0,51,255:17,0 chr1 16534040 . C . PASS END=16534067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,605:0,51,255:18,0 chr1 16534068 . A . PASS END=16534068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 16534069 . A . PASS END=16534093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 16534170 . C . PASS END=16534191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr1 16534192 . C . PASS END=16534195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16534196 . T . PASS END=16534196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 16534197 . G . PASS END=16534217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1080:0,84,255:29,0 chr1 16534218 . G . PASS END=16534223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 16534224 . C . PASS END=16534254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,792:0,62,255:26,0 chr1 16534255 . C G, 47.39 PASS DP=21;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=2.861;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,8,0:0.381,0.000:21:7,3,0:6,5,0:46:82,0,50,286,465,751:217,0,255:13,0:4.7392e+01,1.0096e-04,5.3000e+01,2.8608e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,3,5:8,5,4,4 chr1 16534256 . C . PASS END=16534261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16534262 . A . PASS END=16534272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:19,0 chr1 16534439 . C . PASS END=16534439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 16534440 . T . LowGQ END=16534441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,222:0,0,252:10,0 chr1 16534442 . C . PASS END=16534442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 16534443 . C . PASS END=16534443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16534444 . C . PASS END=16534446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,310:0,3,255:9,0 chr1 16534447 . G . PASS END=16534447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 16534448 . C . PASS END=16534451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 16534452 . T . PASS END=16534452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:9,0 chr1 16534453 . C . PASS END=16534453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 16534454 . C . PASS END=16534455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 16534456 . G . PASS END=16534457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 16534458 . G . PASS END=16534458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 16534459 . C . PASS END=16534462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16534463 . A . PASS END=16534463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16534464 . C . PASS END=16534464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 16534465 . C . PASS END=16534466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 16534467 . A . LowGQ END=16534468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:0,0,255:10,0 chr1 16534469 . A . PASS END=16534469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 16534470 . G . PASS END=16534470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,371:0,6,255:11,0 chr1 16534471 . A . PASS END=16534471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 16534472 . T . PASS END=16534472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 16534473 . G . PASS END=16534475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 16534476 . T . PASS END=16534476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 16534477 . G . PASS END=16534480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:13,0 chr1 16534481 . G . PASS END=16534481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 16534482 . G . PASS END=16534485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16534486 . G . PASS END=16534490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16534491 . A . PASS END=16534491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 16534492 . T . PASS END=16534492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16534493 . T . PASS END=16534497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16534498 . C . PASS END=16534501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16534502 . G . PASS END=16534502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16534503 . G . PASS END=16534507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 16534508 . G . PASS END=16534508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 16534509 . A . PASS END=16534510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 16534511 . A . PASS END=16534511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 16534512 . A . PASS END=16534514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 16534515 . G . PASS END=16534515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 16534516 . T . PASS END=16534523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 16534524 . G . PASS END=16534524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 16534525 . G . PASS END=16534560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:19,0 chr1 16534561 . G . PASS END=16534579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:23,0 chr1 16534580 . G . PASS END=16534580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 16534581 . G . PASS END=16534582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16534583 . T . PASS END=16534583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 16534584 . G . PASS END=16534590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 16534591 . G . PASS END=16534591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 16534592 . A . PASS END=16534608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,675:0,44,255:19,0 chr1 16534609 . T . PASS END=16534609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 16534610 . C . PASS END=16534610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 16534611 . C . PASS END=16534611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 16534612 . T . PASS END=16534612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 16534613 . C . PASS END=16534613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 16534614 . T . PASS END=16534614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 16534615 . G . PASS END=16534616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 16534617 . G . PASS END=16534617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 16534618 . C . PASS END=16534625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr1 16534626 . C . PASS END=16534627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 16534628 . G . PASS END=16534641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 16534642 . T . PASS END=16534642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 16534643 . G . PASS END=16534643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 16534644 . G . PASS END=16534644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 16534645 . C . PASS END=16534645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 16534646 . C G, 49.45 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,7,0:0.438,0.000:16:4,3,0:5,4,0:48:84,0,50,242,322,564:201,0,255:9,0:4.9453e+01,7.0928e-05,5.3000e+01,2.4218e+02,3.5659e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,3,3,4:3,6,3,4 chr1 16534647 . A . PASS END=16534650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 16534651 . T . PASS END=16534662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,466:0,39,255:13,0 chr1 16534663 . G . PASS END=16534663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 16534664 . C . PASS END=16534664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 16534665 . G . PASS END=16534665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 16534666 . T . PASS END=16534708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr1 16534709 . G . PASS END=16534709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 16534710 . C . PASS END=16534713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,364:0,33,255:11,0 chr1 16534714 . T . LowGQ END=16534714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 16534715 . T . PASS END=16534716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 16534717 . C . PASS END=16534720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 16535138 . A . PASS END=16535182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,535:0,45,255:18,0 chr1 16535183 . G . PASS END=16535183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 16535184 . T . PASS END=16535197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 16535198 . T . PASS END=16535198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 16535199 . C . PASS END=16535213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 16535214 . A . PASS END=16535214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 16535215 . G . PASS END=16535225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,604:0,45,255:16,0 chr1 16535226 . G . PASS END=16535227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 16535228 . C . PASS END=16535230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 16535231 . C . PASS END=16535248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 16535249 . T . LowGQ END=16535249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:10,0 chr1 16535250 . G . PASS END=16535264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr1 16535265 . C . LowGQ END=16535265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 16535266 . C . PASS END=16535269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 16535270 . T . PASS END=16535270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 16535271 . C . PASS END=16535279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,466:0,39,255:13,0 chr1 16535280 . G . PASS END=16535280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 16535281 . G . PASS END=16535285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 16535286 . C . PASS END=16535308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 16535309 . A . PASS END=16535310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 16535311 . A . LowGQ END=16535311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,233:3,0,236:8,0 chr1 16535312 . A . PASS END=16535322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 16535323 . A . PASS END=16535347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr1 16535348 . C . PASS END=16535349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 16535350 . A . PASS END=16535350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 16535351 . G . PASS END=16535365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 16535366 . C . PASS END=16535370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 16535371 . G . PASS END=16535378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 16535379 . C . PASS END=16535394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 16535395 . G . PASS END=16535438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 16535439 . C . PASS END=16535448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 16535449 . A . PASS END=16535455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 16535456 . G . PASS END=16535456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 16535457 . A . PASS END=16535460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 16535461 . T . PASS END=16535461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 16535462 . C . PASS END=16535472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 16535473 . A G, 0.01 DRAGENSnpHardQUAL DP=11;MQ=250.00;MQRankSum=1.423;ReadPosRankSum=-1.107;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:6,0,0:4,1,0:29:6,0,50,36,349,385:6,0,255:10,0:5.3360e-03,2.9109e+01,8.2109e+01,6.4869e+01,4.1324e+02,4.1723e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,0,1:6,4,1,0 chr1 16535474 . C . PASS END=16535486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 16535487 . G . PASS END=16535492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 16535493 . A . PASS END=16535502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:8:0,18,270:0,24,255:6,0 chr1 16535503 . G . PASS END=16535507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 16535508 . A . PASS END=16535525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:9,0 chr1 16535526 . G . PASS END=16535526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 16535527 . G . PASS END=16535535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 16535536 . G . PASS END=16535536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 16535537 . G . PASS END=16535539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 16535540 . C . PASS END=16535540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 16535541 . A . PASS END=16535549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 16545264 . T . PASS END=16545273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:87:0,120,1800:0,248,255:40,0 chr1 16546709 . C . PASS END=16546758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,125,255:40,0 chr1 16551727 . C . PASS END=16551821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1116:0,87,255:40,0 chr1 16551822 . G . PASS END=16551858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:36:0,97,1319:0,97,255:38,0 chr1 16551859 . A G, 49.87 PASS DP=38;MQ=201.05;MQRankSum=-1.535;ReadPosRankSum=4.117;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,0:0.486,0.000:37:9,6,0:10,12,0:48:85,0,50,557,680,1237:255,0,255:17,0:4.9871e+01,6.6527e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,14,9,9:9,10,7,11 chr1 16551860 . C . PASS END=16551896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,102,1530:0,111,255:39,0 chr1 16551897 . C . PASS END=16551926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:37,0 chr1 16551927 . A . PASS END=16551930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 16551931 . G . PASS END=16551946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:28,0 chr1 16551947 . A . PASS END=16551950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 16551951 . A . PASS END=16551953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 16551954 . C . PASS END=16551969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,69,255:22,0 chr1 16551970 . A . PASS END=16551970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 16551971 . A . PASS END=16551971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 16551972 . A . PASS END=16551972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 16551973 . G . PASS END=16551984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 16552085 . C . PASS END=16552149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1072:0,82,255:35,0 chr1 16552150 . C . PASS END=16552167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,922:0,62,255:26,0 chr1 16552323 . C . PASS END=16552378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:37:0,84,1241:0,84,255:39,0 chr1 16552379 . A . PASS END=16552380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 16558543 . T . PASS END=16558556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,674:0,44,255:19,0 chr1 16558557 . T . PASS END=16558559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:22,0 chr1 16558560 . C . PASS END=16558560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 16558561 . T . PASS END=16558592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,845:0,69,255:25,0 chr1 16558593 . G . PASS END=16558593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 16558594 . G . PASS END=16558644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,798:0,63,255:26,0 chr1 16558645 . G . PASS END=16558645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 16558646 . G . PASS END=16558658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 16558659 . G . PASS END=16558661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 16558662 . C . PASS END=16558663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 16558664 . T . PASS END=16558695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,931:0,65,255:26,0 chr1 16558696 . C T, 42.81 PASS DP=25;MQ=250.00;MQRankSum=3.932;ReadPosRankSum=1.369;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,8,0:0.320,0.000:25:7,6,0:10,2,0:42:78,0,50,286,608,894:235,0,255:16,0:4.2806e+01,2.4929e-04,5.3000e+01,2.8606e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,7,3,5:4,13,5,3 chr1 16558697 . G . PASS END=16558697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 16558698 . G . PASS END=16558714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr1 16558715 . A . PASS END=16558715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 16558716 . G . PASS END=16558716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 16558717 . C . PASS END=16558717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 16558718 . A . PASS END=16558724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 16558725 . G . PASS END=16558728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 16558729 . C . PASS END=16558731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16558732 . G . PASS END=16558732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 16558733 . G . PASS END=16558733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 16558734 . C . PASS END=16558749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 16558750 . G . PASS END=16558756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,737:0,49,255:19,0 chr1 16558757 . C . PASS END=16558765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 16558766 . A . PASS END=16558766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 16558767 . C . PASS END=16558769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 16558770 . C . PASS END=16558784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 16558785 . G . PASS END=16558785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 16558786 . G . PASS END=16558792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 16558994 . C . PASS END=16558996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 16558997 . A . PASS END=16558997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 16558998 . A . PASS END=16559010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,809:0,72,255:26,0 chr1 16559011 . C . PASS END=16559117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1114:0,84,255:39,0 chr1 16559118 . G . PASS END=16559118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:37:34:0,37,907:0,37,255:28,0 chr1 16559119 . G . PASS END=16559119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:18:34:0,18,765:0,18,255:25,0 chr1 16559120 . C . PASS END=16559121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:30,0 chr1 16559122 . T . PASS END=16559122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:27,0 chr1 16559123 . C . PASS END=16559128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:29,0 chr1 16559129 . T . PASS END=16559129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:28,0 chr1 16559130 . C . PASS END=16559141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 16559388 . C . PASS END=16559391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 16559392 . A . PASS END=16559393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 16559394 . C . PASS END=16559394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 16559395 . A . PASS END=16559400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1072:0,90,255:30,0 chr1 16559401 . T . PASS END=16559402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 16559403 . G A, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=1.576;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:8,6,0:7,9,0:48:85,0,50,528,508,1036:255,0,255:15,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,9,6:6,9,8,7 chr1 16559404 . A . PASS END=16559406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 16559407 . T . PASS END=16559408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1001:0,76,255:30,0 chr1 16559409 . T . PASS END=16559410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 16559411 . T . PASS END=16559411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1062:0,54,255:29,0 chr1 16559412 . G . PASS END=16559440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:32:0,83,1180:0,83,255:39,0 chr1 16559441 . C . PASS END=16559502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1147:0,80,255:38,0 chr1 16559503 . G . PASS END=16559503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 16559504 . T . PASS END=16559504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 16559505 . C . PASS END=16559505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 16559506 . T . PASS END=16559512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 16560107 . C . PASS END=16560111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 16560112 . G . PASS END=16560114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 16560115 . T . PASS END=16560119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 16560120 . G . PASS END=16560134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:25,0 chr1 16560135 . C . PASS END=16560161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:31,0 chr1 16560162 . C . PASS END=16560162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 16560163 . G . PASS END=16560163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 16560164 . C . PASS END=16560164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 16560165 . C . PASS END=16560225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1095:0,82,255:33,0 chr1 16560226 . A . PASS END=16560236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:25,0 chr1 16560237 . C . PASS END=16560237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 16560238 . A . PASS END=16560259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 16563126 . C . PASS END=16563132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr1 16563133 . C . PASS END=16563133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:28,0 chr1 16563134 . C . PASS END=16563136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 16563137 . C . PASS END=16563137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 16563138 . G . PASS END=16563173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1149:0,87,255:31,0 chr1 16563174 . T . PASS END=16563174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 16563175 . G . PASS END=16563178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 16563179 . T . PASS END=16563179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 16563180 . C . PASS END=16563183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 16563184 . A . PASS END=16563198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:27:0,67,986:0,67,255:26,0 chr1 16563199 . T . PASS END=16563199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 16563200 . G . PASS END=16563203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 16563204 . C . PASS END=16563204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:21,0 chr1 16563205 . A . PASS END=16563213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:22,0 chr1 16563214 . A . PASS END=16563214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 16563215 . C . PASS END=16563218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16563219 . G . PASS END=16563237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,47,255:19,0 chr1 16577165 . T . PASS END=16577603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:38:0,90,1386:0,90,255:40,0 chr1 16577604 . G . PASS END=16577604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr1 16577605 . A . PASS END=16577640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1305:0,98,255:37,0 chr1 16577641 . G . PASS END=16577641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:33,0 chr1 16577642 . A . PASS END=16577707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,90,255:38,0 chr1 16577708 . C . PASS END=16577721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr1 16577722 . G . PASS END=16577722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16577723 . T . PASS END=16577723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 16577724 . T . PASS END=16577724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16577725 . C . PASS END=16577726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 16577727 . G . PASS END=16577729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16577730 . G . PASS END=16577733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 16577734 . G . PASS END=16577759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1145:0,80,255:34,0 chr1 16577760 . T . PASS END=16577760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:32,0 chr1 16577761 . T . PASS END=16577832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1257:0,84,255:38,0 chr1 16577833 . T . PASS END=16577833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr1 16577834 . C . PASS END=16577849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1321:0,95,255:37,0 chr1 16577850 . G . PASS END=16577850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr1 16577851 . G . PASS END=16577870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:94:36:0,94,1260:0,94,255:39,0 chr1 16577871 . G . PASS END=16577907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:36:0,83,1191:0,83,255:37,0 chr1 16577908 . G C, 49.47 PASS DP=37;MQ=250.00;MQRankSum=5.166;ReadPosRankSum=0.899;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,17,0:0.459,0.000:37:7,9,0:13,8,0:48:84,0,50,605,707,1313:255,0,255:19,0:4.9473e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,15,6,11:10,10,10,7 chr1 16577909 . A . PASS END=16577919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:35,0 chr1 16577920 . T . PASS END=16577920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 16577921 . A . PASS END=16577945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1260:0,94,255:36,0 chr1 16577946 . C . PASS END=16577980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1263:0,89,255:33,0 chr1 16577981 . T . PASS END=16577981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:32,2 chr1 16577982 . G . PASS END=16577982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1180:0,36,255:32,2 chr1 16577983 . G . PASS END=16577983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:33,0 chr1 16577984 . A . PASS END=16578066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,931:0,82,255:35,0 chr1 16578067 . G . PASS END=16578090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,71,255:26,0 chr1 16578091 . T . PASS END=16578105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 16578106 . T . PASS END=16578106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:28,0 chr1 16578107 . A . PASS END=16578114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 16578115 . G . PASS END=16578115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 16578116 . A . PASS END=16578133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:32,0 chr1 16578134 . T . PASS END=16578134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:26,0 chr1 16578135 . A . PASS END=16578144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 16578145 . G . PASS END=16578153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 16578154 . A . PASS END=16578160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 16578161 . G . PASS END=16578161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 16578162 . G . PASS END=16578181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1111:0,87,255:32,0 chr1 16578182 . A . PASS END=16578182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr1 16578183 . G . PASS END=16578190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 16578191 . A . PASS END=16578191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:30,0 chr1 16578192 . C . PASS END=16578230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1043:0,83,255:33,0 chr1 16578231 . G . PASS END=16578232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16578233 . G . PASS END=16578233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 16578234 . G . PASS END=16578250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 16578251 . C . PASS END=16578257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 16578258 . A . PASS END=16578259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:25,0 chr1 16578260 . G . PASS END=16578263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 16578264 . A . PASS END=16578264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 16578265 . C . PASS END=16578280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:19,0 chr1 16578783 . C . PASS END=16578795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 16578796 . T . PASS END=16578840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,980:0,84,255:34,0 chr1 16578841 . A . PASS END=16578841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr1 16578842 . G . PASS END=16578886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1202:0,83,255:33,0 chr1 16578887 . C . PASS END=16578898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,884:0,61,255:25,0 chr1 16578899 . G . PASS END=16578899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:21,0 chr1 16579591 . A . PASS END=16579665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:33:0,83,1186:0,83,255:40,0 chr1 16580130 . C . PASS END=16580226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,120,255:40,0 chr1 16582206 . A . PASS END=16582297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:34:0,81,1215:0,84,255:40,2 chr1 16582298 . T . PASS END=16582316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:26,0 chr1 16583101 . C . PASS END=16583103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 16583104 . T . PASS END=16583115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:24,0 chr1 16583116 . G . PASS END=16583116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16583117 . A . PASS END=16583121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 16583122 . G . PASS END=16583141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 16583142 . T . PASS END=16583142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 16583143 . C . PASS END=16583254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:31:0,80,1069:0,80,255:40,0 chr1 16621278 . C . PASS END=16621372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1038:0,85,255:38,0 chr1 16621373 . A . PASS END=16621381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr1 16621382 . A . PASS END=16621382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 16621383 . T . PASS END=16621384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:20,0 chr1 16621385 . G . PASS END=16621385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 16621386 . A . PASS END=16621392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16621393 . A . PASS END=16621401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 16621402 . A . PASS END=16621412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 16632298 . T . PASS END=16632414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:42:0,93,1276:0,93,255:40,0 chr1 16641664 . C . PASS END=16641672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr1 16641673 . G . PASS END=16641698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:25,0 chr1 16641699 . G . PASS END=16641699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 16641700 . C . PASS END=16641704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1030:0,68,255:26,0 chr1 16641705 . G . PASS END=16641708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 16641709 . T . PASS END=16641709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:28,0 chr1 16641710 . G . PASS END=16641870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1190:0,83,255:40,0 chr1 16641871 . C . PASS END=16641894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,70,255:26,0 chr1 16641895 . T . PASS END=16641895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 16641896 . G . PASS END=16641900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 16641901 . A . PASS END=16641901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 16641902 . G . PASS END=16641902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 16641903 . G . PASS END=16641903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 16641904 . A . PASS END=16641913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 16693753 . A . PASS END=16693803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1211:0,88,255:39,0 chr1 16713790 . T . PASS END=16713791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 16713792 . A . PASS END=16713796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,776:0,52,255:20,0 chr1 16713997 . A . PASS END=16714010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,210:6,0 chr1 16714011 . G . PASS END=16714015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 16714016 . A . PASS END=16714016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 16714017 . G . PASS END=16714028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 16714029 . T . PASS END=16714034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 16714035 . G . PASS END=16714035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 16714036 . G . PASS END=16714036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 16714037 . C . PASS END=16714037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 16714038 . A . PASS END=16714041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 16714042 . C . PASS END=16714042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 16714043 . A . PASS END=16714044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 16714045 . G . PASS END=16714050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,446:0,42,255:14,0 chr1 16714051 . T . PASS END=16714051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 16714052 . T . PASS END=16714052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 16714053 . T . PASS END=16714056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16714057 . G . PASS END=16714065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 16714066 . C . PASS END=16714066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 16714067 . C . PASS END=16714067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 16714068 . C . PASS END=16714074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:17,0 chr1 16714075 . T . PASS END=16714075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,561:0,23,255:17,0 chr1 16714076 . T . PASS END=16714082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:18:0,47,652:0,47,255:19,0 chr1 16714083 . G . PASS END=16714092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 16714093 . T . PASS END=16714151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,601:0,40,255:19,0 chr1 16714152 . G . PASS END=16714152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 16714153 . G . PASS END=16714166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 16714167 . C . PASS END=16714175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,495:0,31,255:12,0 chr1 16714176 . A . PASS END=16714207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 16717870 . G . PASS END=16717919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,137,255:40,0 chr1 16719723 . C . PASS END=16719737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 16719738 . T . PASS END=16719740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16719741 . T . PASS END=16719754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 16719755 . T . PASS END=16719755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 16719756 . T . PASS END=16719757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16719758 . T . PASS END=16719758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 16719759 . G . PASS END=16719769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 16719770 . A . PASS END=16719770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 16719771 . T . PASS END=16719771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16719772 . A . PASS END=16719772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 16719773 . G . PASS END=16719775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 16719776 . T . PASS END=16719776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 16719777 . T . PASS END=16719783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 16719784 . G . PASS END=16719787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 16719788 . C . PASS END=16719788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 16719789 . C . PASS END=16719806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 16719807 . C . PASS END=16719815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 16719816 . G . PASS END=16719819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 16719820 . A . PASS END=16719820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 16719821 . C . PASS END=16719834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:24,0 chr1 16719835 . G . PASS END=16719835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 16719836 . T . PASS END=16719847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,914:0,62,255:25,0 chr1 16719848 . A . PASS END=16719848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:25,0 chr1 16719849 . C . PASS END=16719854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 16719855 . C . PASS END=16719864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,927:0,81,255:28,0 chr1 16719865 . A . PASS END=16719865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 16719866 . C . PASS END=16719867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 16719868 . C . PASS END=16719869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 16719870 . T . PASS END=16719904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:31,0 chr1 16719905 . A . PASS END=16719905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 16719906 . C . PASS END=16719922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1141:0,87,255:30,0 chr1 16719923 . G . PASS END=16719937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,900:0,63,255:21,0 chr1 16719938 . C . PASS END=16719975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 16719976 . A . PASS END=16719976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 16719977 . G . PASS END=16719977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 16721533 . G . PASS END=16721635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:40:0,96,1438:0,104,255:40,0 chr1 16725260 . T . PASS END=16725261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 16725262 . A . PASS END=16725262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 16725263 . G . PASS END=16725279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1096:0,90,255:32,0 chr1 16725280 . C . PASS END=16725280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:30,0 chr1 16725281 . A . PASS END=16725317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1225:0,89,255:36,0 chr1 16725733 . T . PASS END=16725735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 16725736 . G . PASS END=16725744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,537:0,42,255:16,0 chr1 16725745 . T . PASS END=16725745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 16725746 . C . PASS END=16725767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:19,0 chr1 16725768 . C . PASS END=16725771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 16725772 . A . PASS END=16725772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 16725773 . G . PASS END=16725794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:23,0 chr1 16725795 . A . PASS END=16725795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 16725796 . A . PASS END=16725802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,793:0,69,255:23,0 chr1 16725803 . A . PASS END=16725804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,820:0,53,255:19,0 chr1 16725805 . G . PASS END=16725814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,939:0,75,255:25,0 chr1 16725815 . G . PASS END=16725815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 16725816 . G . PASS END=16725836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,961:0,72,255:25,0 chr1 16725837 . A . PASS END=16725837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 16725838 . C . PASS END=16725838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16725839 . C . PASS END=16725839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 16725840 . T . PASS END=16725851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 16725852 . A . PASS END=16725852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:19,0 chr1 16725853 . T . PASS END=16725859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16725860 . T . PASS END=16725906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,629:0,45,255:18,0 chr1 16725907 . C . PASS END=16725944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 16725945 . C . PASS END=16725959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 16725960 . G . PASS END=16725968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 16725969 . A . PASS END=16726016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 16727028 . T . PASS END=16727035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:35,0 chr1 16727057 . T . PASS END=16727130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,108,1444:0,108,255:40,0 chr1 16727215 . C . PASS END=16727219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:91:36:0,91,1235:0,91,255:31,0 chr1 16727220 . T . PASS END=16727220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1122:0,42,255:27,0 chr1 16727221 . T . PASS END=16727223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:91:32:0,91,1135:0,91,255:32,0 chr1 16727224 . G . PASS END=16727225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 16727226 . T . PASS END=16727333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1142:0,80,255:40,0 chr1 16727334 . G . PASS END=16727336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1094:0,77,255:26,0 chr1 16727337 . T . PASS END=16727337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16727338 . C . PASS END=16727340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,989:0,74,255:26,0 chr1 16727341 . T . PASS END=16727341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,920:0,51,255:24,0 chr1 16727342 . C . PASS END=16727345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,978:0,70,255:24,0 chr1 16727346 . T . PASS END=16727346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,841:0,36,255:21,0 chr1 16727347 . G . PASS END=16727353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:25,0 chr1 16727354 . G . PASS END=16727354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:22,0 chr1 16727355 . C . PASS END=16727355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:23,0 chr1 16727356 . A . PASS END=16727356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:21,0 chr1 16727357 . G . PASS END=16727360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr1 16727361 . C . PASS END=16727363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,748:0,42,255:23,0 chr1 16727364 . T . PASS END=16727364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 16727365 . C . PASS END=16727365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:23,0 chr1 16727366 . C . PASS END=16727370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:24,0 chr1 16727371 . G . PASS END=16727373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,709:0,41,255:24,0 chr1 16727374 . T . PASS END=16727381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 16727382 . T . PASS END=16727382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 16727383 . A . PASS END=16727384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 16727385 . T . PASS END=16727387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 16730222 . T . PASS END=16730226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 16730227 . G . PASS END=16730228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,551:0,34,255:16,0 chr1 16730229 . T . PASS END=16730232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 16730233 . C . PASS END=16730240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16730241 . C . PASS END=16730241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 16730242 . T . PASS END=16730251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,721:0,60,255:22,0 chr1 16730252 . A . PASS END=16730252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 16730253 . A . PASS END=16730258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 16730259 . G . PASS END=16730259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 16730260 . C . PASS END=16730261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 16730262 . T . PASS END=16730262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,754:0,42,255:22,0 chr1 16730263 . C . PASS END=16730263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 16730264 . T . PASS END=16730264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 16730265 . C . PASS END=16730274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:25,0 chr1 16730275 . G . PASS END=16730276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,866:0,59,255:24,0 chr1 16730277 . A . PASS END=16730278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr1 16730279 . A . PASS END=16730279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 16730280 . G . PASS END=16730280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 16730281 . G . PASS END=16730281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,836:0,20,255:23,0 chr1 16730282 . A . PASS END=16730282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 16730283 . T . PASS END=16730283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,777:0,58,255:24,0 chr1 16730284 . C . PASS END=16730287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 16730288 . A . PASS END=16730288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 16730289 . A . PASS END=16730297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,870:0,61,255:26,0 chr1 16730298 . T . PASS END=16730298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:21,0 chr1 16730299 . G . PASS END=16730313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,853:0,62,255:23,0 chr1 16730314 . A . PASS END=16730320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 16730321 . T . PASS END=16730321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 16730322 . C . PASS END=16730339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,704:0,44,255:19,0 chr1 16730463 . C . PASS END=16730463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 16730464 . C . PASS END=16730464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 16730465 . A . PASS END=16730487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1005:0,84,255:30,0 chr1 16730488 . G . PASS END=16730488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 16730489 . T . PASS END=16730490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 16730491 . T . PASS END=16730498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 16730499 . C . PASS END=16730504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1028:0,87,255:30,0 chr1 16730505 . A . PASS END=16730534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr1 16731462 . C . PASS END=16731472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,730:0,63,255:22,0 chr1 16731473 . G . PASS END=16731479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,906:0,72,255:26,0 chr1 16731480 . T . PASS END=16731509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1008:0,81,255:38,0 chr1 16731510 . C G, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.239;ReadPosRankSum=2.184;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,23,0:0.590,0.000:39:9,12,0:7,11,0:47:85,0,48,762,572,1334:255,0,255:15,0:5.0000e+01,8.1800e-05,5.0527e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,12,11:9,7,17,6 chr1 16731511 . A . PASS END=16731547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1396:0,101,255:39,0 chr1 16731548 . T . PASS END=16731571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1210:0,86,255:34,0 chr1 16731572 . T . PASS END=16731572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 16731573 . T . PASS END=16731588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:31,0 chr1 16731589 . G . PASS END=16731589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16731590 . C . PASS END=16731590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16731591 . T . PASS END=16731591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 16731592 . G . PASS END=16731596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16731597 . A . PASS END=16731599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 16735613 . C . PASS END=16735651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:34:0,81,1183:0,81,255:39,0 chr1 16735652 . C . PASS END=16735652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:34,0 chr1 16735653 . C . PASS END=16735680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1219:0,89,255:36,0 chr1 16735681 . T . PASS END=16735687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 16735688 . C . PASS END=16735688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:23,0 chr1 16735689 . C . PASS END=16735698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:24,0 chr1 16736096 . C . PASS END=16736114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 16736115 . G . PASS END=16736131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 16736132 . T C, 50.00 PASS DP=21;MQ=248.58;MQRankSum=3.096;ReadPosRankSum=3.171;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,14,0:0.667,0.000:21:2,5,0:5,9,0:41:85,0,39,493,250,743:255,0,208:7,0:5.0000e+01,3.1582e-04,4.2026e+01,4.5000e+02,2.8514e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,0,11,3:2,5,6,8 chr1 16736133 . G . PASS END=16736154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,679:0,63,255:21,0 chr1 16736155 . C . PASS END=16736163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 16736164 . G . PASS END=16736169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 16736170 . G . PASS END=16736178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 16736179 . C . PASS END=16736179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16736180 . A . PASS END=16736180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,937:0,29,255:25,0 chr1 16736181 . G . PASS END=16736181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,990:0,68,255:26,0 chr1 16736182 . C . PASS END=16736182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16736183 . A . PASS END=16736183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 16736184 . G . PASS END=16736184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 16736185 . G . PASS END=16736185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 16736186 . A . PASS END=16736187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 16736188 . A . PASS END=16736188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 16736189 . G . PASS END=16736191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 16736192 . C . PASS END=16736195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:27,0 chr1 16736196 . G . PASS END=16736393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1172:0,81,255:40,0 chr1 16736394 . C . PASS END=16736394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 16736395 . C . PASS END=16736401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1099:0,93,255:32,0 chr1 16736402 . T . PASS END=16736402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:31,0 chr1 16736403 . T . PASS END=16736410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1105:0,86,255:34,0 chr1 16736411 . T . PASS END=16736411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:32,0 chr1 16736412 . C . PASS END=16736420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:33,0 chr1 16736421 . A . PASS END=16736424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1125:0,69,255:26,0 chr1 16736425 . C . PASS END=16736441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:32,0 chr1 16736442 . A . PASS END=16736442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1062:0,41,255:29,0 chr1 16736443 . G . PASS END=16736462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 16736463 . C . PASS END=16736463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:30,0 chr1 16736464 . T . PASS END=16736474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 16736475 . C . PASS END=16736493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 16736494 . C . PASS END=16736494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:22,0 chr1 16736495 . T . PASS END=16736498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:24,0 chr1 16736499 . C . PASS END=16736499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr1 16736500 . A . PASS END=16736504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:20,0 chr1 16736505 . C . PASS END=16736505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:20,0 chr1 16736506 . T . PASS END=16736506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:19,0 chr1 16736507 . G . PASS END=16736507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 16736508 . G . PASS END=16736508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 16736509 . C . PASS END=16736519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,697:0,47,255:19,0 chr1 16736520 . C . PASS END=16736520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 16736521 . T . PASS END=16736524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 16736525 . A . PASS END=16736530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:18,0 chr1 16736531 . C . PASS END=16736531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 16736532 . T . PASS END=16736537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,43,255:18,0 chr1 16736538 . C . PASS END=16736538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 16748004 . T . PASS END=16748034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:8,0 chr1 16748035 . G . PASS END=16748047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,210:0,18,210:6,0 chr1 16748048 . C . PASS END=16748048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 16748049 . A . PASS END=16748052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 16748406 . C . PASS END=16748409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 16748410 . C . PASS END=16748410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:36,1 chr1 16748411 . T . PASS END=16748411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:39:0,83,1392:0,83,255:36,1 chr1 16748412 . T . PASS END=16748412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1277:0,78,255:37,0 chr1 16748413 . T . PASS END=16748438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1388:0,98,255:40,0 chr1 16748439 . G . PASS END=16748475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1292:0,95,255:40,0 chr1 16748476 . C T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=1.781;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:7,10,0:12,9,0:48:85,0,50,651,678,1329:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,11,8,11:10,9,7,12 chr1 16748477 . G . PASS END=16748513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1304:0,92,255:36,0 chr1 16748514 . C . PASS END=16748560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1102:0,87,255:33,0 chr1 16748561 . G . PASS END=16748598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:26,0 chr1 16748599 . G . PASS END=16748629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 16748630 . A . PASS END=16748645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 16748646 . A . PASS END=16748657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:13,0 chr1 16748658 . T . PASS END=16748666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 16748667 . G A, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=0.929;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,8,0:0.667,0.000:12:3,4,0:1,4,0:47:85,0,47,281,143,424:255,0,119:3,0:5.0000e+01,8.6460e-05,5.0049e+01,2.8117e+02,1.7783e+02,4.2723e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,1,7:2,2,5,3 chr1 16748668 . G . PASS END=16748688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 16748689 . C . PASS END=16748689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 16752019 . C . PASS END=16752029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 16752030 . C . PASS END=16752031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 16752032 . G . PASS END=16752032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 16752033 . G . PASS END=16752057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 16752058 . G . PASS END=16752058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 16752059 . T . PASS END=16752059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 16752060 . T . PASS END=16752077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 16752078 . G . PASS END=16752078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 16752079 . G . PASS END=16752099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr1 16752100 . G . PASS END=16752101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 16752102 . C . PASS END=16752107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 16752108 . G . PASS END=16752108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 16752109 . C . PASS END=16752123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 16752124 . T . PASS END=16752141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,413:0,36,255:12,0 chr1 16752142 . A . PASS END=16752142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 16752143 . G . PASS END=16752151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 16752152 . C . PASS END=16752158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 16752159 . C . PASS END=16752167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 16752168 . C . PASS END=16752176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 16752177 . C . PASS END=16752182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 16752183 . G . PASS END=16752196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:8,0 chr1 16752197 . T . PASS END=16752210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:6:0,12,180:0,18,225:5,0 chr1 16752211 . A . PASS END=16752211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 16752212 . G . PASS END=16752216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr1 16752217 . C . PASS END=16752217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 16752218 . T . PASS END=16752226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 16754359 . C . PASS END=16754376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:26,0 chr1 16754377 . C . PASS END=16754377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 16754378 . C . PASS END=16754383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 16754384 . C . PASS END=16754427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:33,0 chr1 16754428 . A . PASS END=16754428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 16754429 . G . PASS END=16754436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 16754437 . C . PASS END=16754437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:25,0 chr1 16754438 . C . PASS END=16754439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 16754440 . T . PASS END=16754441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:30:0,69,1002:0,69,255:29,0 chr1 16754442 . C . PASS END=16754447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1217:0,86,255:31,0 chr1 16754448 . C . PASS END=16754450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 16754451 . T . PASS END=16754455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16754456 . A . PASS END=16754480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,876:0,69,255:24,0 chr1 16754481 . G . PASS END=16754481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 16754482 . C . PASS END=16754486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 16754487 . T . PASS END=16754487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 16754488 . T . PASS END=16754495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 16754496 . A . PASS END=16754496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr1 16754497 . T . PASS END=16754497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16754498 . C . PASS END=16754498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 16754499 . C . PASS END=16754506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 16754507 . T . PASS END=16754507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 16754508 . G . PASS END=16754510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 16757738 . C . PASS END=16757866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:37:0,81,1343:0,81,255:40,0 chr1 16767257 . A . PASS END=16767259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 16767260 . G . PASS END=16767260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 16767261 . A . PASS END=16767261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:26,0 chr1 16767262 . G . PASS END=16767274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr1 16767275 . G . PASS END=16767282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 16767283 . G . PASS END=16767284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 16767285 . T . PASS END=16767285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 16767286 . C . PASS END=16767341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1162:0,83,255:34,0 chr1 16767342 . G . PASS END=16767348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 16770127 . G . PASS END=16770211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1062:0,84,255:38,0 chr1 16770212 . G . PASS END=16770227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 16774365 . G . PASS END=16774375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 16774376 . G . PASS END=16774391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 16774392 . A . PASS END=16774392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 16774393 . T . PASS END=16774395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 16774396 . G . PASS END=16774396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 16774397 . T . PASS END=16774398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 16774399 . T . PASS END=16774399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 16774400 . C . PASS END=16774401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16774402 . T . PASS END=16774402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 16774403 . G . PASS END=16774403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 16774404 . G . PASS END=16774404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:8,0 chr1 16774405 . C . PASS END=16774413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 16774414 . G . PASS END=16774433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:16,0 chr1 16774434 . G . PASS END=16774434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 16774435 . C . PASS END=16774436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 16774437 . G . PASS END=16774437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 16774438 . G . PASS END=16774440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 16774441 . C . PASS END=16774441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 16774442 . T . PASS END=16774447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 16774448 . A . PASS END=16774448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 16774449 . T . PASS END=16774449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 16774450 . C . PASS END=16774450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 16774451 . C . PASS END=16774460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 16774461 . A . PASS END=16774461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 16774462 . T . PASS END=16774469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 16774555 . G . PASS END=16774636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:35:0,82,1395:0,82,255:40,0 chr1 16775588 . G . PASS END=16775588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 16775589 . T . PASS END=16775589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16775590 . G . PASS END=16775591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 16775592 . G . PASS END=16775592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 16775593 . T . PASS END=16775601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:32,0 chr1 16775602 . A . PASS END=16775602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr1 16775603 . G . PASS END=16775627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1202:0,86,255:33,0 chr1 16775628 . A . PASS END=16775628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1179:0,66,255:33,0 chr1 16775629 . A . PASS END=16775664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1288:0,84,255:38,0 chr1 16775665 . A . PASS END=16775665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1186:0,71,255:30,0 chr1 16775666 . G . PASS END=16775667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1225:0,86,255:30,0 chr1 16775668 . A . PASS END=16775691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr1 16775692 . T . PASS END=16775692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 16775693 . C . PASS END=16775696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 16776620 . T . PASS END=16776630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,576:0,40,255:19,0 chr1 16776631 . G . PASS END=16776639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 16776640 . A . PASS END=16776640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 16776641 . G . PASS END=16776654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:26,0 chr1 16776655 . C . PASS END=16776655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 16776656 . A . PASS END=16776658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 16776659 . C . PASS END=16776661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 16776662 . G . PASS END=16776663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 16776664 . G . PASS END=16776666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 16776667 . C . PASS END=16776675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 16776676 . A . PASS END=16776676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 16776677 . T . PASS END=16776697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,840:0,64,255:26,0 chr1 16776698 . G . PASS END=16776702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 16776703 . A . PASS END=16776703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 16776704 . A . PASS END=16776706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 16776707 . A . PASS END=16776715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16778333 . A . PASS END=16778352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 16778353 . A . PASS END=16778353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 16778354 . G . PASS END=16778354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16778355 . C . PASS END=16778367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 16778368 . C . PASS END=16778368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 16778369 . C . PASS END=16778382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:15,0 chr1 16778383 . C . PASS END=16778389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 16778390 . G . PASS END=16778393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 16778394 . G . PASS END=16778394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 16778395 . G . PASS END=16778398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 16778399 . A . PASS END=16778412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 16778413 . T . LowGQ END=16778416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,402:0,0,255:12,0 chr1 16778417 . C . PASS END=16778421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 16778422 . G . PASS END=16778422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 16778423 . G . PASS END=16778428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 16778429 . A . PASS END=16778429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 16778430 . C . PASS END=16778441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 16778442 . T . PASS END=16778442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 16778443 . C . PASS END=16778445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 16778446 . T . PASS END=16778446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 16778447 . C . PASS END=16778465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 16778466 . C . PASS END=16778467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16778468 . G . PASS END=16778468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 16778469 . T . PASS END=16778472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 16778473 . G . PASS END=16778480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16778481 . T . PASS END=16778481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 16778482 . C . PASS END=16778485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 16778486 . C . PASS END=16778502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 16778503 . C . PASS END=16778503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 16778504 . A . PASS END=16778506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 16778507 . T . PASS END=16778507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 16778508 . C . PASS END=16778510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 16782290 . G . PASS END=16782359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1357:0,98,255:40,0 chr1 16782360 . A . PASS END=16782360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1242:0,59,255:33,0 chr1 16782361 . T . PASS END=16782388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1196:0,92,255:38,0 chr1 16785337 . A . PASS END=16785340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 16785341 . A . PASS END=16785341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 16785342 . C . PASS END=16785348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:23,0 chr1 16785349 . C . PASS END=16785349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 16785350 . C . PASS END=16785361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,837:0,61,255:26,0 chr1 16785362 . G . PASS END=16785362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 16785363 . G . PASS END=16785363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 16785364 . C . PASS END=16785364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 16785365 . A . PASS END=16785367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 16785368 . G . PASS END=16785368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16785369 . G . PASS END=16785369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr1 16785370 . C . PASS END=16785372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 16785373 . G . PASS END=16785373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 16785374 . G . PASS END=16785394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1258:0,105,255:36,0 chr1 16785395 . G . PASS END=16785395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:33,0 chr1 16785396 . G . PASS END=16785469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:32:0,81,1200:0,81,255:36,0 chr1 16785470 . C . PASS END=16785470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 16785471 . T . PASS END=16785474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 16785475 . C . PASS END=16785491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,77,255:27,0 chr1 16890438 . T . PASS END=16890440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr1 16890441 . C T, 4.50 DRAGENSnpHardQUAL DP=102;MQ=147.38;MQRankSum=-3.651;ReadPosRankSum=1.102;FractionInformativeReads=0.990;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:85,16,0:0.158,0.000:101:38,9,0:47,7,0:5:37,0,50,572,2957,3529:255,0,255:40,0:4.5048e+00,1.9006e+00,5.4451e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:63,22,12,4:42,43,9,7 chr1 16890442 . T . PASS END=16890483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:101:0,120,1800:0,255,255:40,0 chr1 16890484 . G C, 5.23 DRAGENSnpHardQUAL DP=125;MQ=148.00;MQRankSum=-5.317;ReadPosRankSum=4.340;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:105,20,0:0.160,0.000:125:51,10,0:54,10,0:5:38,0,50,699,3682,4381:255,0,255:40,0:5.2334e+00,1.5471e+00,5.4097e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:63,42,11,9:49,56,9,11 chr1 16890485 . T . PASS END=16890521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:133,0:133:99:125:0,120,1800:0,255,255:40,0 chr1 16890522 . G . PASS END=16890557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:171,0:171:99:158:0,120,1800:0,255,255:40,0 chr1 16890558 . C . PASS END=16890597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:162,0:162:99:150:0,120,1800:0,255,255:40,0 chr1 16890598 . T A, 42.89 PASS DP=155;MQ=105.83;MQRankSum=-3.742;ReadPosRankSum=7.334;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:95,60,0:0.387,0.000:155:55,32,0:40,28,0:42:78,0,45,178,178,178:255,0,255:40,0:4.2886e+01,2.9071e-04,4.8100e+01,1.7766e+02,2.1243e+02,1.8067e+02:0.00,34.77,37.78,34.77,69.54,37.78:44,51,20,40:52,43,34,26 chr1 16890599 . A . PASS END=16890601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:155,0:155:99:154:0,120,1800:0,255,255:40,0 chr1 16890602 . T . LowGQ END=16890602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:135,21:156:0:156:0,0,3988:255,0,255:40,0 chr1 16890603 . T . PASS END=16890638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:146,1:147:99:121:0,120,1800:0,255,255:40,0 chr1 16890639 . C . LowGQ END=16890639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,19:122:0:122:0,0,3249:255,0,255:40,0 chr1 16890640 . A . PASS END=16890643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:116:0,120,1800:0,255,255:40,0 chr1 16890644 . C T, 30.76 PASS DP=117;MQ=100.55;MQRankSum=-2.908;ReadPosRankSum=-1.019;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:90,27,0:0.231,0.000:117:47,12,0:43,15,0:31:66,0,45,166,166,166:255,0,255:40,0:3.0760e+01,3.7180e-03,4.7904e+01,1.6553e+02,2.0030e+02,1.6854e+02:0.00,34.77,37.78,34.77,69.54,37.78:32,58,10,17:49,41,19,8 chr1 16890645 . T . PASS END=16890670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:93:0,120,1800:0,255,255:40,0 chr1 16890671 . T C, 42.41 PASS DP=93;MQ=108.52;MQRankSum=-6.035;ReadPosRankSum=1.512;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:59,34,0:0.366,0.000:93:31,15,0:28,19,0:42:77,0,47,177,177,177:255,0,255:40,0:4.2411e+01,2.9278e-04,5.0000e+01,1.7718e+02,2.1195e+02,1.8019e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,40,14,20:29,30,21,13:16890671 chr1 16890672 . G A, 42.41 PASS DP=89;MQ=109.45;MQRankSum=-6.018;ReadPosRankSum=1.448;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:56,33,0:0.371,0.000:89:29,14,0:27,19,0:42:77,0,47,177,177,177:255,0,255:40,0:4.2411e+01,2.9278e-04,5.0000e+01,1.7718e+02,2.1195e+02,1.8019e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,38,14,19:27,29,21,12:16890671 chr1 16890673 . C . PASS END=16890681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:83:0,120,1800:0,211,255:40,0 chr1 16892903 . C . PASS END=16892933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:86:0,120,1800:0,244,255:40,0 chr1 16892934 . C . PASS END=16892954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:90:0,120,1800:0,255,255:40,0 chr1 16894472 . A . PASS END=16894472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:215,4:219:99:219:0,120,1800:0,255,255:40,0 chr1 16894474 . C . PASS END=16894525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:239,1:240:99:229:0,120,1800:0,255,255:40,0 chr1 16895568 . C . PASS END=16895596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:154,6:160:99:155:0,120,1800:0,255,255:40,0 chr1 16895597 . T . PASS END=16895633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:156,1:157:99:154:0,120,1800:0,255,255:40,0 chr1 16895634 . T G, 36.67 PASS DP=154;MQ=28.18;MQRankSum=-4.571;ReadPosRankSum=8.116;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,101,0:0.656,0.000:154:22,51,0:31,50,0:33:71,0,32,3531,1850,5381:255,0,255:40,0:3.6669e+01,2.3832e-03,3.4772e+01,4.4853e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,20,50,51:26,27,52,49 chr1 16895635 . G . PASS END=16895694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:147,0:147:99:124:0,120,1800:0,255,255:40,0 chr1 16895695 . C . PASS END=16895695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,9:124:54:124:0,54,3980:0,54,255:40,0 chr1 16895696 . T . PASS END=16895702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:115:0,120,1800:0,255,255:40,0 chr1 16899637 . C . PASS END=16899655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,746:0,66,255:24,0 chr1 16899656 . T . PASS END=16899656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 16899657 . T . PASS END=16899659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,811:0,72,255:24,0 chr1 16899660 . T . PASS END=16899660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr1 16899661 . T . PASS END=16899663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,797:0,75,255:25,0 chr1 16899664 . T . PASS END=16899664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,801:0,36,255:24,0 chr1 16899665 . C . PASS END=16899665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr1 16899666 . T . PASS END=16899666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 16899667 . T . PASS END=16899668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 16899669 . C . PASS END=16899669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,770:0,20,255:23,0 chr1 16899670 . T . PASS END=16899670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:23,0 chr1 16899671 . C . PASS END=16899671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 16899672 . A . PASS END=16899673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,801:0,44,255:24,0 chr1 16899674 . C . PASS END=16899684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,795:0,61,255:26,0 chr1 16899685 . T . PASS END=16899685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,816:0,39,255:25,0 chr1 16899686 . T . PASS END=16899688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:26,0 chr1 16900982 . C . PASS END=16900983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:98:0,120,1800:0,255,255:40,0 chr1 16900984 . G . PASS END=16901020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:103:0,120,1800:0,255,255:40,0 chr1 16901021 . A . LowGQ END=16901021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,13:126:0:126:0,0,3596:65,0,255:40,0 chr1 16901022 . G . PASS END=16901058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:133,1:134:99:126:0,120,1800:0,255,255:40,0 chr1 16901059 . T . PASS END=16901141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:144,0:144:99:140:0,120,1800:0,255,255:40,0 chr1 16901142 . C . PASS END=16901178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:89:0,120,1800:0,244,255:40,0 chr1 16901179 . G T, 0.02 DRAGENSnpHardQUAL DP=88;MQ=28.73;MQRankSum=-4.010;ReadPosRankSum=3.657;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:75,13,0:0.148,0.000:88:33,4,0:42,9,0:24:11,0,42,465,2613,3078:255,0,255:40,0:1.7422e-02,2.3976e+01,6.8976e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,52,3,10:35,40,10,3 chr1 16901180 . G . PASS END=16901187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:85:0,120,1800:0,217,255:40,0 chr1 16901652 . C . PASS END=16901676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,103,1745:0,103,255:40,0 chr1 16901677 . T . PASS END=16901692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,124,255:40,0 chr1 16901693 . T . PASS END=16901693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1389:0,72,255:40,0 chr1 16901694 . T . PASS END=16901713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1568:0,116,255:40,0 chr1 16901714 . G A, 39.33 PASS DP=43;MQ=40.40;MQRankSum=-0.426;ReadPosRankSum=-0.986;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,23,0:0.535,0.000:43:9,11,0:11,12,0:38:74,0,42,814,687,1501:255,0,255:21,0:3.9334e+01,6.3891e-04,4.5153e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,8,15:7,13,14,9 chr1 16901715 . T . PASS END=16901724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,116,1620:0,116,255:40,0 chr1 16902762 . C . PASS END=16902783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:115:0,120,1800:0,255,255:40,0 chr1 16902784 . G A, 0.80 DRAGENSnpHardQUAL DP=127;MQ=25.27;MQRankSum=3.559;ReadPosRankSum=2.410;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:108,19,0:0.150,0.000:127:56,8,0:52,11,0:8:28,0,36,577,3792,4369:255,0,255:40,0:7.9721e-01,7.7552e+00,4.6755e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:64,44,8,11:56,52,13,6 chr1 16902785 . T . PASS END=16902814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,0:129:99:126:0,120,1800:0,255,255:40,0 chr1 16902815 . T . PASS END=16902843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,0:128:99:121:0,120,1800:0,158,255:40,0 chr1 16902844 . G T, 5.14 DRAGENSnpHardQUAL DP=120;MQ=25.19;MQRankSum=-1.471;ReadPosRankSum=2.922;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:93,27,0:0.225,0.000:120:45,13,0:48,14,0:5:38,0,41,966,3300,4266:255,0,255:40,0:5.1410e+00,1.5874e+00,4.5337e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:39,54,15,12:43,50,13,14 chr1 16902845 . T . PASS END=16902883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:71:0,120,1800:0,213,255:40,0 chr1 16902884 . T C, 18.50 PASS DP=72;MQ=20.14;MQRankSum=-0.157;ReadPosRankSum=0.094;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,21,0:0.296,0.000:71:24,11,0:26,10,0:18:53,0,32,749,1741,2489:255,0,255:39,0:1.8497e+01,6.3098e-02,3.5396e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,32,8,13:24,26,12,9 chr1 16902885 . T . PASS END=16902893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,189,255:40,0 chr1 16902894 . A G, 219.60 PASS DP=64;MQ=19.41;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,31,0:0,32,0:187:257,190,0,2414,190,2414:255,192,0:0,0:2.1960e+02,1.8660e+02,0.0000e+00,4.5000e+02,2.2137e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,44:0,0,29,34 chr1 16902895 . G . PASS END=16902896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,170,255:40,0 chr1 16903812 . C . PASS END=16903813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 16903814 . G . PASS END=16903814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1157:0,28,255:32,0 chr1 16903815 . A . PASS END=16903847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1266:0,89,255:36,0 chr1 16903848 . T . PASS END=16903848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1217:0,31,255:30,0 chr1 16903849 . T . PASS END=16903866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,990:0,82,255:32,0 chr1 16903867 . G . PASS END=16903867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 16903868 . C . PASS END=16903868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 16903869 . T . PASS END=16903874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,77,255:24,0 chr1 16903875 . C . PASS END=16903884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:23,0 chr1 16903885 . A . PASS END=16903886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 16903887 . T . PASS END=16903889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 16903890 . A . PASS END=16903901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,66,255:19,0 chr1 16903902 . C . PASS END=16903911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 16903912 . T A, 79.48 PASS DP=15;MQ=26.05;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,9,0:0,6,0:42:117,45,0,582,45,582:255,45,0:0,0:7.9479e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,14:0,0,7,8 chr1 16903913 . T . PASS END=16903914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 16907240 . C . PASS END=16907290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:77:0,120,1800:0,215,255:40,0 chr1 16907291 . C . PASS END=16907327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:95:0,120,1800:0,231,255:40,0 chr1 16907328 . G T, 0.03 DRAGENSnpHardQUAL DP=97;MQ=34.71;MQRankSum=-5.498;ReadPosRankSum=5.415;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:79,18,0:0.186,0.000:97:41,12,0:38,6,0:21:13,0,39,615,2716,3331:255,0,255:40,0:3.1804e-02,2.1369e+01,6.3702e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:36,43,7,11:38,41,11,7 chr1 16907329 . G . PASS END=16907365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:82:0,120,1800:0,230,255:40,0 chr1 16907366 . A . PASS END=16907448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:37:0,81,1215:0,88,255:40,0 chr1 16907449 . T . PASS END=16907451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:35:0,78,1170:0,105,255:26,0 chr1 16907915 . C . PASS END=16907987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:74:0,120,1800:0,191,255:40,0 chr1 16913545 . C . PASS END=16913545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 16913546 . T . PASS END=16913546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 16913547 . G . PASS END=16913555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:71:25:0,71,864:0,71,255:27,0 chr1 16913556 . T . PASS END=16913557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 16913558 . T . PASS END=16913558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 16913559 . A . PASS END=16913730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:28:0,80,964:0,80,255:40,0 chr1 16913731 . T . PASS END=16913751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,67,255:26,0 chr1 16913752 . C . PASS END=16913756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,56,255:18,0 chr1 16914220 . C . PASS END=16914249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:78:0,120,1800:0,218,255:40,0 chr1 16914250 . G A, 12.93 PASS DP=96;MQ=38.40;MQRankSum=-1.328;ReadPosRankSum=4.689;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:78,18,0:0.188,0.000:96:32,8,0:46,10,0:13:47,0,42,147,147,147:255,0,255:40,0:1.2928e+01,2.2726e-01,4.4977e+01,1.4770e+02,1.8247e+02,1.5071e+02:0.00,34.77,37.78,34.77,69.54,37.78:38,40,10,8:38,40,12,6 chr1 16914251 . C . PASS END=16914251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:97:0,120,1800:0,255,255:40,0 chr1 16914252 . C . PASS END=16914252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,6:97:67:97:0,67,3219:0,67,255:40,0 chr1 16914253 . T . PASS END=16914287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:93:0,120,1800:0,252,255:40,0 chr1 16914288 . A . PASS END=16914292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:93:0,120,1800:0,246,255:40,0 chr1 16916394 . C . PASS END=16916395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,220,255:40,0 chr1 16916396 . G . PASS END=16916496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:56:0,120,1800:0,168,255:40,0 chr1 16918382 . A . PASS END=16918425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:231,1:232:99:224:0,120,1800:0,255,255:40,0 chr1 16918426 . T . PASS END=16918464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:238,1:239:99:226:0,120,1800:0,255,255:40,0 chr1 16918465 . A G, 8.28 DRAGENSnpHardQUAL DP=227;MQ=92.31;MQRankSum=-9.896;ReadPosRankSum=1.301;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:180,47,0:0.207,0.000:227:105,28,0:75,19,0:8:42,0,48,1677,6324,8001:255,0,255:40,0:8.2829e+00,6.9817e-01,5.1448e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:71,109,15,32:92,88,24,23 chr1 16918466 . A . PASS END=16918472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:222,0:222:99:214:0,120,1800:0,255,255:40,0 chr1 16918473 . G A, 4.65 DRAGENSnpHardQUAL DP=213;MQ=91.82;MQRankSum=-8.718;ReadPosRankSum=-1.633;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:173,40,0:0.188,0.000:213:100,23,0:73,17,0:5:38,0,48,1422,6162,7584:255,0,255:40,0:4.6507e+00,1.8225e+00,5.2572e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:59,114,11,29:90,83,16,24 chr1 16918474 . T . PASS END=16918501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:186,0:186:99:160:0,120,1800:0,255,255:40,0 chr1 16918502 . A G, 46.20 PASS DP=159;MQ=87.62;MQRankSum=-7.866;ReadPosRankSum=4.397;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,117,0:0.736,0.000:159:21,64,0:21,53,0:30:81,0,27,4166,1473,5639:255,0,255:29,0:4.6204e+01,4.0134e-03,3.0459e+01,4.4853e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,32,36,81:23,19,61,56 chr1 16918503 . G . PASS END=16918516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:156,0:156:99:127:0,120,1800:0,255,255:40,0 chr1 17084013 . C . PASS END=17084043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:69:0,120,1800:0,191,255:40,0 chr1 17084044 . T . PASS END=17084152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:132,0:132:99:105:0,120,1800:0,255,255:40,0 chr1 17085298 . C . PASS END=17085308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:40:0,81,1376:0,81,255:40,0 chr1 17085309 . A . PASS END=17085464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:47:0,120,1800:0,141,255:40,0 chr1 17085465 . G . PASS END=17085501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:96:0,120,1800:0,149,255:40,0 chr1 17085502 . T C, 31.57 PASS DP=100;MQ=70.69;MQRankSum=-1.781;ReadPosRankSum=4.882;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:69,31,0:0.310,0.000:100:46,15,0:23,16,0:31:66,0,46,1072,2444,3515:255,0,255:40,0:3.1565e+01,3.0802e-03,4.9353e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,41,11,20:35,34,15,16 chr1 17085503 . C . PASS END=17085530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:95:0,120,1800:0,255,255:40,0 chr1 17085561 . T . PASS END=17085563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:106:0,120,1800:0,255,255:40,0 chr1 17085564 . A . PASS END=17085564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,8:107:33:107:0,33,3362:0,33,255:40,0 chr1 17085565 . G . PASS END=17085633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:81:0,120,1800:0,205,255:40,0 chr1 17085634 . G . PASS END=17085663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,189,255:40,0 chr1 17085971 . C . PASS END=17085994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:86:96:0,86,1800:0,86,255:40,2 chr1 17085995 . G . LowGQ END=17085995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,21:96:0:96:0,0,2003:148,0,255:40,0 chr1 17085996 . C . PASS END=17086001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:97:0,120,1800:0,239,255:40,0 chr1 17086002 . C G, 44.00 PASS DP=78;MQ=53.73;MQRankSum=0.594;ReadPosRankSum=2.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,32,0:0.410,0.000:78:20,19,0:26,13,0:42:79,0,43,179,179,179:255,0,255:40,0:4.4000e+01,2.9123e-04,4.5650e+01,1.7877e+02,2.1354e+02,1.8178e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,42,13,19:26,20,20,12 chr1 17086003 . G . LowGQ END=17086003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,21:98:0:98:0,0,2274:155,0,255:40,0 chr1 17086004 . C . PASS END=17086006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:98:0,120,1800:0,247,255:40,0 chr1 17086007 . A . LowGQ END=17086007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,22:98:0:98:0,0,2187:255,0,255:40,0 chr1 17086008 . C . PASS END=17086009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,2:102:99:102:0,120,1800:0,255,255:40,0 chr1 17086010 . T . LowGQ END=17086010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,20:102:0:102:0,0,2461:91,0,255:40,0 chr1 17086011 . C . PASS END=17086011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,7:105:99:105:0,120,1800:0,162,255:40,0 chr1 17086012 . A . LowGQ END=17086012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,14:104:0:104:0,0,2688:2,0,255:40,0 chr1 17086013 . C . PASS END=17086013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,5:105:99:105:0,120,1800:0,232,255:40,0 chr1 17086014 . T . LowGQ END=17086014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,21:105:0:105:0,0,2431:78,0,255:40,0 chr1 17086015 . T . PASS END=17086015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,6:105:99:105:0,120,1800:0,178,255:40,0 chr1 17086016 . G . LowGQ END=17086018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,17:102:0:100:0,0,2588:7,0,255:40,0 chr1 17086019 . C . PASS END=17086019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,3:102:99:102:0,120,1800:0,233,255:40,0 chr1 17086020 . G . LowGQ END=17086020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,17:102:0:102:0,0,2681:5,0,255:40,0 chr1 17086021 . C . PASS END=17086022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,9:102:99:101:0,120,1800:0,128,255:40,0 chr1 17086023 . T . LowGQ END=17086023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,16:101:0:101:0,0,2560:36,0,255:40,0 chr1 17086024 . A . PASS END=17086024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,14:101:56:101:0,56,2836:0,56,255:40,0 chr1 17086025 . T . PASS END=17086029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:102:0,120,1800:0,170,255:40,0 chr1 17086030 . C . LowGQ END=17086030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,18:103:0:103:0,0,2677:26,0,255:40,0 chr1 17086031 . T . PASS END=17086031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,6:103:99:103:0,120,1800:0,187,255:40,0 chr1 17086032 . G . PASS END=17086032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,13:104:52:104:0,52,2970:0,52,255:40,0 chr1 17086033 . G . PASS END=17086033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:106:0,120,1800:0,255,255:40,0 chr1 17086034 . C . PASS END=17086034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,12:106:46:106:0,46,3080:0,46,255:40,0 chr1 17086035 . G . PASS END=17086036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,8:106:99:106:0,120,1800:0,163,255:40,0 chr1 17086037 . A . LowGQ END=17086037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,14:106:0:106:0,0,2933:53,0,255:40,0 chr1 17086038 . A . PASS END=17086039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:107:0,120,1800:0,233,255:40,0 chr1 17086040 . T . LowGQ END=17086041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,13:107:0:104:0,0,2848:20,0,255:40,0 chr1 17086042 . G . PASS END=17086045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,5:103:99:102:0,120,1800:0,170,255:40,0 chr1 17086046 . C . LowGQ END=17086046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,11:102:0:102:0,0,2924:9,0,255:40,0 chr1 17086047 . T . PASS END=17086048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,5:101:99:101:0,120,1800:0,191,255:40,0 chr1 17086049 . A . PASS END=17086049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,12:101:38:101:0,38,2961:0,38,255:40,0 chr1 17086050 . T . PASS END=17086051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,9:101:81:101:0,81,1800:0,81,255:40,0 chr1 17086052 . T C, 283.99 PASS DP=82;MQ=42.30;FractionInformativeReads=0.988 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,81,0:1.000,0.000:81:0,44,0:0,37,0:239:322,242,0,2993,242,2993:255,255,0:0,0:2.8399e+02,2.3894e+02,0.0000e+00,4.5000e+02,2.7371e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,59:0,0,45,36 chr1 17086053 . G . PASS END=17086055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:95:0,120,1800:0,221,255:40,0 chr1 17086056 . A . PASS END=17086056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,12:97:42:97:0,42,2851:0,42,255:40,0 chr1 17086057 . T . PASS END=17086059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,3:96:99:96:0,120,1800:0,237,255:40,0 chr1 17086060 . G . LowGQ END=17086060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,14:97:0:97:0,0,2734:58,0,255:40,0 chr1 17086061 . C . PASS END=17086073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,1:105:99:95:0,116,1800:0,116,255:40,0 chr1 17086074 . T . PASS END=17086074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,12:96:45:96:0,45,2895:0,45,255:40,0 chr1 17086075 . G . PASS END=17086084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,5:94:88:93:0,88,1800:0,88,255:40,0 chr1 17086085 . G GC, 4.71 DRAGENIndelHardQUAL DP=86;MQ=43.53;MQRankSum=-3.831;ReadPosRankSum=-1.010;FractionInformativeReads=0.965;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:66,17,0:0.205,0.000:83:36,8,0:30,9,0:5:32,0,45,554,2141,2695:255,0,255:40,17:4.7089e+00,1.7925e+00,4.9842e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:28,38,6,11:36,30,7,10 chr1 17086086 . C . LowGQ END=17086086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,19:90:0:90:0,0,1887:255,0,255:40,0 chr1 17086087 . C . PASS END=17086128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:84:0,120,1800:0,196,255:40,0 chr1 17086129 . C . PASS END=17086181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:72:0,120,1800:0,206,255:40,0 chr1 17086384 . C . PASS END=17086442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,87,255:40,0 chr1 17086443 . G . PASS END=17086458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 17086459 . C . PASS END=17086464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17086465 . T . PASS END=17086468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 17086469 . G . PASS END=17086469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 17086470 . C . PASS END=17086472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17086473 . T . PASS END=17086473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17086474 . A . PASS END=17086474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 17086475 . G . PASS END=17086476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 17086477 . T . PASS END=17086496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,915:0,64,255:26,0 chr1 17086497 . A . PASS END=17086502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,53,255:17,0 chr1 17087246 . C . PASS END=17087327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,1:139:99:120:0,120,1800:0,255,255:40,0 chr1 17087328 . G . PASS END=17087364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:146,0:146:99:136:0,120,1800:0,255,255:40,0 chr1 17087365 . C G, 40.81 PASS DP=129;MQ=106.65;MQRankSum=-1.617;ReadPosRankSum=7.109;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:82,47,0:0.364,0.000:129:41,21,0:41,26,0:40:76,0,48,1587,2838,4425:255,0,255:40,0:4.0810e+01,3.9607e-04,5.0850e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:44,38,16,31:41,41,28,19 chr1 17087366 . G . PASS END=17087368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:132,0:132:99:131:0,120,1800:0,255,255:40,0 chr1 17087450 . C . PASS END=17087597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,0:123:99:96:0,120,1800:0,249,255:40,0 chr1 17090909 . C . PASS END=17090945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,215,255:40,0 chr1 17090946 . G . PASS END=17090975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:65:0,120,1800:0,196,255:40,0 chr1 17244467 . A . PASS END=17244503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 17244504 . C . PASS END=17244547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 17244548 . A . LowGQ END=17244548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 17244549 . G . PASS END=17244568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr1 17244569 . C . PASS END=17244572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 17244573 . A . PASS END=17244573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 17244574 . T . PASS END=17244579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 17244580 . G . PASS END=17244587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 17244588 . G . PASS END=17244589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,527:0,45,255:15,0 chr1 17244590 . T . PASS END=17244590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 17244591 . T . PASS END=17244594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,483:0,45,255:15,0 chr1 17244595 . A . PASS END=17244595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 17244596 . C . PASS END=17244638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:18,0 chr1 17244639 . A . PASS END=17244639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 17244640 . T . PASS END=17244673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:17,0 chr1 17244674 . A . PASS END=17244674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 17244675 . G . PASS END=17244676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 17244677 . G . PASS END=17244677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 17244678 . A . PASS END=17244687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,455:0,48,255:17,0 chr1 17244688 . A . PASS END=17244688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 17244689 . C . PASS END=17244689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 17244690 . T . PASS END=17244690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 17244691 . G . PASS END=17244692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 17244693 . T . PASS END=17244693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 17244694 . G . PASS END=17244706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:19,0 chr1 17244707 . G . PASS END=17244707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr1 17244708 . C . PASS END=17244715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,685:0,47,255:19,0 chr1 17244716 . G . PASS END=17244716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17244717 . G . PASS END=17244719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,629:0,43,255:19,0 chr1 17244720 . T . PASS END=17244720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:16,0 chr1 17244721 . G . PASS END=17244734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,601:0,40,255:18,0 chr1 17244735 . G . PASS END=17244735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,643:0,26,255:16,0 chr1 17244736 . G . PASS END=17244736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 17244737 . A . PASS END=17244737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr1 17244738 . G . PASS END=17244740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 17244741 . C . PASS END=17244741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:16,0 chr1 17244742 . A . PASS END=17244744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,698:0,44,255:18,0 chr1 17244745 . T . PASS END=17244745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:18,0 chr1 17244746 . G . PASS END=17244746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,604:0,13,255:16,0 chr1 17244747 . G . LowGQ END=17244747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,582:45,0,255:16,0 chr1 17244748 . C . PASS END=17244748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,618:0,13,255:16,0 chr1 17244749 . C . LowGQ END=17244749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,626:9,0,255:16,0 chr1 17244750 . A . PASS END=17244750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:17,0 chr1 17244751 . G . LowGQ END=17244757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:20:0,0,457:6,0,255:16,0 chr1 17244758 . A . PASS END=17244758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:14,0 chr1 17244759 . A . LowGQ END=17244761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,557:16,0,255:13,0 chr1 17244762 . T . PASS END=17244762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,701:0,39,255:12,0 chr1 17244763 . G . LowGQ END=17244763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:0:26:0,0,678:30,0,255:11,0 chr1 17244764 . T . PASS END=17244764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:14:26:0,14,761:0,14,255:11,0 chr1 17244765 . T . LowGQ END=17244768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,7:26:0:26:0,0,562:7,0,255:10,0 chr1 17244769 . A . PASS END=17244769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,861:0,34,255:11,0 chr1 17244770 . T . LowGQ END=17244770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,6:27:0:27:0,0,604:55,0,255:9,0 chr1 17244771 . C . PASS END=17244771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,784:0,31,255:10,0 chr1 17244772 . C . LowGQ END=17244772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,765:29,0,255:8,0 chr1 17244773 . A . PASS END=17244773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:33:28:0,33,495:0,51,255:9,0 chr1 17244774 . G . LowGQ END=17244775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,676:40,0,255:6,0 chr1 17244776 . T . PASS END=17244776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:30:29:0,30,450:0,54,255:8,0 chr1 17244777 . T . LowGQ END=17244780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:29:0,0,631:0,0,255:6,0 chr1 17244781 . A . PASS END=17244781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,994:0,27,255:7,0 chr1 17244782 . A . PASS END=17244782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:30:33:0,30,450:0,49,255:7,0 chr1 17244783 . G . LowGQ END=17244786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,701:3,0,255:6,0 chr1 17244787 . A . PASS END=17244787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:27:35:0,27,405:0,33,255:6,0 chr1 17244788 . A . LowGQ END=17244788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:35:0,0,869:97,0,255:4,0 chr1 17244789 . T . PASS END=17244789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:27:35:0,27,405:0,55,255:6,0 chr1 17244790 . T . LowGQ END=17244792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,788:0,0,255:6,1 chr1 17244793 . G . PASS END=17244793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,919:0,16,255:7,3 chr1 17244794 . T . LowGQ END=17244794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,8:36:0:36:0,0,782:83,0,255:5,4 chr1 17244795 . CTTTTTTTTTTTTT CTTT,C,CTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTT, 67.72 PASS DP=25;MQ=75.14;MQRankSum=-1.514;ReadPosRankSum=-0.157;FractionInformativeReads=0.960;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/3:2,7,3,2,4,5,1,0:0.292,0.125,0.083,0.167,0.208,0.042,0.000:24:2,5,1,0,3,1,1,0:0,2,2,2,1,4,0,0:9:79,35,57,169,467,195,319,8,146,53,314,17,157,314,62,349,141,290,338,357,187,330,57,200,326,345,401,102,126,0,113,115,119,149,135,92:255,0,156:3,31:6.7716e+01,2.5016e+01,5.0422e+01,1.5910e+02,4.5000e+02,1.8805e+02,3.0968e+02,6.2181e-01,1.3825e+02,4.6516e+01,3.0482e+02,8.9555e+00,1.4978e+02,3.0663e+02,5.4998e+01,3.3975e+02,1.3384e+02,2.8251e+02,3.3044e+02,3.4929e+02,1.8088e+02,3.2040e+02,4.9168e+01,1.9247e+02,3.1891e+02,3.3702e+02,3.9387e+02,9.5418e+01,1.4934e+02,2.5209e+01,1.3837e+02,1.4063e+02,1.4389e+02,1.7402e+02,1.6009e+02,1.1829e+02:0.00,2.00,5.00,2.00,4.00,5.00,2.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,4.00,5.00,34.77,36.77,36.77,36.77,36.77,36.77,36.77,37.77:2,0,7,15:2,0,12,10 chr1 17244796 . T . LowGQ END=17244807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:24,14:38:0:35:0,0,0:0,0,255:29,17 chr1 17244808 . T . PASS END=17244808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:32:35:0,32,1115:0,32,255:30,1 chr1 17244809 . T . PASS END=17244809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 17244810 . T . PASS END=17244818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1250:0,91,255:32,0 chr1 17244819 . G . LowGQ END=17244819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:0:36:0,0,887:42,0,255:31,0 chr1 17244820 . G . PASS END=17244820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:20:36:0,20,1068:0,20,255:32,0 chr1 17244821 . A . LowGQ END=17244822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:0:36:0,0,781:3,0,255:34,0 chr1 17244823 . A . PASS END=17244823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:16:38:0,16,988:0,16,255:33,0 chr1 17244824 . A . PASS END=17244824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:20:38:0,20,1166:0,20,255:34,0 chr1 17244825 . T . PASS END=17244825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1296:0,59,255:35,0 chr1 17244826 . T . PASS END=17244826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1289:0,75,255:34,0 chr1 17244827 . G . PASS END=17244827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1194:0,42,255:33,0 chr1 17244828 . G . PASS END=17244829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1325:0,84,255:35,0 chr1 17244830 . T . PASS END=17244831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1182:0,45,255:35,0 chr1 17244832 . G . PASS END=17244832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1296:0,70,255:35,0 chr1 17244833 . A . PASS END=17244833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1241:0,45,255:35,0 chr1 17244834 . A . PASS END=17244834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1372:0,101,255:35,0 chr1 17244835 . G . PASS END=17244835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:29:44:0,29,1246:0,29,255:37,0 chr1 17244836 . C . PASS END=17244836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1494:0,63,255:39,0 chr1 17244837 . A . PASS END=17244839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:85:44:0,85,1509:0,85,255:40,0 chr1 17244840 . G . PASS END=17244840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:53:47:0,53,1510:0,53,255:40,0 chr1 17244841 . G . PASS END=17244842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:86:47:0,86,1540:0,86,255:40,0 chr1 17244843 . C . PASS END=17244843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:42:48:0,42,1535:0,42,255:40,0 chr1 17244844 . A . PASS END=17244844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:47:0,108,1649:0,108,255:40,0 chr1 17244845 . C . LowGQ END=17244845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:0:51:0,0,1496:5,0,255:40,0 chr1 17244846 . A . PASS END=17244846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,122,255:40,0 chr1 17244847 . T . PASS END=17244847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:48:51:0,48,1640:0,48,255:40,0 chr1 17244848 . A . PASS END=17244848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:51:0,120,1798:0,120,255:40,0 chr1 17244849 . C . PASS END=17244849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:29:52:0,29,1643:0,29,255:40,0 chr1 17244850 . A . PASS END=17244851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:52:0,109,1800:0,109,255:40,0 chr1 17244852 . G . PASS END=17244852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:12:51:0,12,1551:0,12,255:40,0 chr1 17244853 . A . PASS END=17244853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:90:52:0,90,1690:0,90,255:40,0 chr1 17244854 . G . PASS END=17244854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:70:52:0,70,1731:0,70,255:40,0 chr1 17244855 . G . PASS END=17244856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:99:53:0,109,1758:0,109,255:40,0 chr1 17244857 . T . PASS END=17244861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,106,1766:0,106,255:40,0 chr1 17244862 . T . PASS END=17244862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:70:51:0,70,1626:0,70,255:40,0 chr1 17244863 . A . PASS END=17244863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:99:51:0,103,1654:0,103,255:40,0 chr1 17244864 . T . PASS END=17244864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:17:50:0,17,1539:0,17,255:40,0 chr1 17244865 . G . PASS END=17244865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:59:49:0,59,1596:0,59,255:40,0 chr1 17244866 . A . PASS END=17244867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,117,1761:0,117,255:40,0 chr1 17244868 . T . PASS END=17244868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:62:50:0,62,1606:0,62,255:40,0 chr1 17244869 . T . PASS END=17244871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:89:50:0,89,1714:0,89,255:40,0 chr1 17244872 . T . PASS END=17244872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:40:50:0,40,1643:0,40,255:40,0 chr1 17244873 . G . PASS END=17244874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,103,1769:0,103,255:40,0 chr1 17244875 . G . PASS END=17244875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1723:0,73,255:40,0 chr1 17244876 . A . PASS END=17244882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:50:0,81,1701:0,81,255:40,0 chr1 17244883 . G . PASS END=17244883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:65:51:0,65,1680:0,65,255:40,0 chr1 17244884 . A . PASS END=17244895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:95:46:0,95,1652:0,95,255:40,0 chr1 17244896 . C . PASS END=17244928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:95:40:0,95,1339:0,95,255:40,0 chr1 17248514 . A . PASS END=17248529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 17248530 . C . LowGQ END=17248530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 17248531 . G . PASS END=17248531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 17248532 . A G, 74.10 PASS DP=9;MQ=248.27;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,3,0:0,6,0:24:112,27,0,349,27,349:255,27,0:0,0:7.4104e+01,2.4104e+01,1.6918e-02,3.4603e+02,5.8874e+01,3.4903e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,6:0,0,3,6 chr1 17248533 . G . PASS END=17248553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 17248554 . C . PASS END=17248556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 17248557 . T . PASS END=17248557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 17248558 . A . PASS END=17248567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 17248568 . A . PASS END=17248569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 17248570 . C . PASS END=17248573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 17249158 . A . PASS END=17249172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,737:0,54,255:19,0 chr1 17249173 . G . PASS END=17249173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 17249174 . T . PASS END=17249174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 17249175 . C . PASS END=17249189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:26,0 chr1 17249190 . A . PASS END=17249190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 17249191 . G . PASS END=17249191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 17249192 . G . PASS END=17249293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,978:0,81,255:40,0 chr1 17250820 . T . PASS END=17250835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1141:0,93,255:35,0 chr1 17250836 . A G, 35.85 PASS DP=35;MQ=250.00;MQRankSum=4.546;ReadPosRankSum=3.633;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,10,0:0.286,0.000:35:11,4,0:14,6,0:36:71,0,50,358,857,1215:255,0,255:25,0:3.5848e+01,1.1516e-03,5.3001e+01,3.5770e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,10,8,2:15,10,2,8 chr1 17250837 . G . PASS END=17250873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:35:0,105,1175:0,105,255:40,0 chr1 17250874 . A . PASS END=17250944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1141:0,80,255:40,0 chr1 17250945 . G . PASS END=17250945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 17250946 . C . PASS END=17250946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 17250947 . C . PASS END=17250974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 17256341 . C . PASS END=17256346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 17256347 . C . PASS END=17256347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 17256348 . A . PASS END=17256350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 17256351 . C . PASS END=17256351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 17256352 . T . PASS END=17256352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 17256353 . C . PASS END=17256355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 17256356 . C . PASS END=17256359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 17256360 . T . PASS END=17256375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 17256376 . G . PASS END=17256381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17256382 . G . PASS END=17256382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:14,0 chr1 17256383 . C . PASS END=17256390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 17256391 . C . PASS END=17256391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:13,0 chr1 17256392 . A . PASS END=17256392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 17256393 . G . PASS END=17256393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17256394 . G . PASS END=17256394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 17256395 . G . PASS END=17256395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 17256396 . G . PASS END=17256397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 17256398 . C . PASS END=17256399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 17256400 . G . PASS END=17256405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:19,0 chr1 17256406 . G . PASS END=17256408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 17256409 . G . PASS END=17256410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17256411 . G . PASS END=17256429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,962:0,69,255:26,0 chr1 17256430 . G . PASS END=17256431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 17256432 . T . PASS END=17256439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17256440 . G . PASS END=17256442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17256443 . C . PASS END=17256444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17256445 . G . PASS END=17256447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 17256448 . C . PASS END=17256448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 17256449 . T . PASS END=17256461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 17256462 . A . PASS END=17256462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 17256463 . G . PASS END=17256473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 17256474 . A . PASS END=17256474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 17256475 . C . PASS END=17256478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 17256479 . G . PASS END=17256517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,906:0,72,255:26,0 chr1 17256518 . C . PASS END=17256518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 17256519 . A . PASS END=17256526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:26,0 chr1 17256619 . A . PASS END=17256644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:35:0,105,1250:0,105,255:40,0 chr1 17256645 . G T, 27.58 PASS DP=44;MQ=189.68;MQRankSum=0.081;ReadPosRankSum=3.334;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,11,0:0.250,0.000:44:21,5,0:12,6,0:28:62,0,50,365,1172,1537:255,0,255:34,0:2.7577e+01,7.6164e-03,5.3008e+01,3.6471e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,20,6,5:15,18,4,7 chr1 17256646 . G . PASS END=17256682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:43:0,98,1278:0,98,255:40,0 chr1 17256683 . T . PASS END=17256702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,104,1567:0,104,255:40,0 chr1 17256781 . G . PASS END=17256787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 17256788 . A . PASS END=17256790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17256791 . A . PASS END=17256814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,931:0,64,255:26,0 chr1 17256815 . T . PASS END=17256815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 17256816 . C . PASS END=17256829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 17256830 . A . PASS END=17256830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 17256831 . G . PASS END=17256833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17256834 . G . PASS END=17256836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 17256837 . G . PASS END=17256838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17256839 . A . PASS END=17256841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 17256842 . G . PASS END=17256842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 17256924 . G . PASS END=17256931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 17256932 . G . PASS END=17256932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17256933 . C . PASS END=17256933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 17256934 . C . PASS END=17256934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 17256935 . T . PASS END=17256935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 17256936 . G . PASS END=17256940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 17256941 . A . PASS END=17256941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 17256942 . G . PASS END=17256995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,870:0,61,255:25,0 chr1 17256996 . T . PASS END=17256996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:21,0 chr1 17256997 . C . PASS END=17257004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr1 17257005 . G . PASS END=17257005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 17257006 . G . PASS END=17257011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 17257012 . C . PASS END=17257012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 17257013 . G . PASS END=17257014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 17257015 . A . PASS END=17257015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,663:0,41,255:23,0 chr1 17257016 . A . PASS END=17257020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 17257021 . A . PASS END=17257021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 17257022 . C . PASS END=17257022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 17257023 . C . PASS END=17257023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 17257024 . A . PASS END=17257025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 17257026 . T . PASS END=17257034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,768:0,52,255:19,0 chr1 17257035 . A . PASS END=17257036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:21,0 chr1 17257037 . G . PASS END=17257037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 17257038 . C . LowGQ END=17257038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,692:9,0,255:19,0 chr1 17257039 . T . PASS END=17257040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 17257041 . C . PASS END=17257042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 17257043 . G . PASS END=17257043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17257044 . C . PASS END=17257044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:20,0 chr1 17257045 . A . PASS END=17257046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,0 chr1 17257047 . G . PASS END=17257048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 17257049 . A . PASS END=17257049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,658:0,11,255:19,0 chr1 17257050 . G . PASS END=17257050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17257051 . C . PASS END=17257051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:18,0 chr1 17257052 . T . PASS END=17257054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 17257055 . A . PASS END=17257055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:17,0 chr1 17257056 . G . PASS END=17257056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 17257057 . C . PASS END=17257060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,686:0,24,255:18,0 chr1 17257061 . G . PASS END=17257061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 17257062 . G . PASS END=17257063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 17257064 . A . PASS END=17257064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 17257065 . G . PASS END=17257065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 17257066 . G . PASS END=17257066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 17257067 . C . PASS END=17257067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr1 17257068 . G . PASS END=17257069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:18,0 chr1 17257070 . C . PASS END=17257070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 17257071 . G . PASS END=17257074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:18,0 chr1 17257075 . A . PASS END=17257075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:14,0 chr1 17257076 . G . PASS END=17257077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 17257078 . C . PASS END=17257078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 17257079 . G . PASS END=17257079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 17257080 . C . PASS END=17257080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 17257081 . G . PASS END=17257081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 17257082 . A . PASS END=17257082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:15,0 chr1 17257083 . G . PASS END=17257084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 17257085 . A . PASS END=17257085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr1 17257086 . G . PASS END=17257087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 17257088 . A . PASS END=17257088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 17257089 . G . PASS END=17257089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 17257786 . T . PASS END=17257792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1266:0,91,255:34,0 chr1 17257793 . A . PASS END=17257793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1199:0,69,255:34,0 chr1 17257794 . C . PASS END=17257892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1296:0,90,255:40,0 chr1 17263132 . G . PASS END=17263143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr1 17263144 . G . PASS END=17263171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1001:0,84,255:33,0 chr1 17263172 . C . PASS END=17263172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr1 17263173 . G . PASS END=17263175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:33,0 chr1 17263176 . C . PASS END=17263177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 17263178 . G . PASS END=17263238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,86,255:37,0 chr1 17263239 . C . PASS END=17263240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 17263241 . G . PASS END=17263241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 17263242 . C . PASS END=17263243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 17263244 . C . PASS END=17263248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 17263249 . G . PASS END=17263249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:26,0 chr1 17263250 . A . PASS END=17263250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17263251 . A . PASS END=17263273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 17263274 . C . PASS END=17263274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 17263275 . T . PASS END=17263297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 17263298 . G . PASS END=17263298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 17263299 . T . PASS END=17263316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 17263317 . T . PASS END=17263352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 17263353 . C . PASS END=17263353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 17263354 . T . PASS END=17263359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 17263360 . C . PASS END=17263366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:11,0 chr1 17263367 . A . PASS END=17263368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr1 17264136 . A . PASS END=17264232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1146:0,93,255:40,0 chr1 17264895 . G . PASS END=17264919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,113,1413:0,113,255:40,0 chr1 17264920 . C T, 25.38 PASS DP=44;MQ=150.20;MQRankSum=-1.572;ReadPosRankSum=2.656;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,11,0:0.250,0.000:44:14,5,0:19,6,0:25:60,0,50,385,1180,1566:255,0,255:33,0:2.5381e+01,1.2620e-02,5.3013e+01,3.8529e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,15,7,4:13,20,5,6 chr1 17264921 . G . PASS END=17264938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,120,1800:0,132,255:40,0 chr1 17264939 . T C, 25.64 PASS DP=48;MQ=154.28;MQRankSum=-1.607;ReadPosRankSum=4.321;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,12,0:0.250,0.000:48:16,6,0:20,6,0:26:60,0,50,429,1251,1680:255,0,255:33,0:2.5639e+01,1.1892e-02,5.3012e+01,4.2909e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,19,6,6:15,21,6,6 chr1 17264940 . G . PASS END=17264976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,114,1710:0,129,255:40,0 chr1 17264977 . A . PASS END=17264978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,114,1710:0,123,255:39,0 chr1 17265404 . G . PASS END=17265425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:36:0,90,1305:0,90,255:40,0 chr1 17265426 . G . PASS END=17265426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:40,0 chr1 17265427 . C . PASS END=17265522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:42:0,83,1492:0,83,255:40,0 chr1 17265523 . C . PASS END=17265559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:51:0,120,1800:0,129,255:40,0 chr1 17265560 . C T, 38.50 PASS DP=52;MQ=157.19;MQRankSum=0.293;ReadPosRankSum=4.545;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,17,0:0.327,0.000:52:17,9,0:18,8,0:38:73,0,50,555,1219,1774:255,0,255:29,0:3.8505e+01,6.3451e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,23,5,12:14,21,7,10 chr1 17265561 . C . PASS END=17265597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,118,1800:0,118,255:40,0 chr1 17265598 . G . PASS END=17265625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:31:0,90,1097:0,90,255:40,0 chr1 17265626 . C . PASS END=17265626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 17265627 . T . PASS END=17265628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1127:0,93,255:31,0 chr1 17265629 . C . PASS END=17265629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 17265630 . A . PASS END=17265632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 17265633 . T . PASS END=17265633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:27,0 chr1 17265634 . C . PASS END=17265634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 17265635 . C . PASS END=17265637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr1 17266389 . G . PASS END=17266392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 17266393 . T . PASS END=17266393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 17266394 . G . PASS END=17266397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 17266398 . G . PASS END=17266398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 17266399 . G . PASS END=17266405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,947:0,69,255:26,0 chr1 17266406 . T . PASS END=17266419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,889:0,81,255:32,0 chr1 17266420 . A . PASS END=17266498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:92:32:0,92,1196:0,92,255:40,0 chr1 17266499 . G . PASS END=17266535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:44:0,102,1620:0,102,255:40,0 chr1 17266536 . G C, 29.55 PASS DP=46;MQ=162.57;MQRankSum=1.338;ReadPosRankSum=-1.764;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,12,0:0.261,0.000:46:23,8,0:11,4,0:30:64,0,50,420,1179,1599:255,0,255:33,0:2.9552e+01,4.8392e-03,5.3005e+01,4.1985e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,17,3,9:20,14,7,5 chr1 17266537 . A . PASS END=17266573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1231:0,86,255:39,0 chr1 17266574 . C . PASS END=17266588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1048:0,76,255:26,0 chr1 17270595 . G . PASS END=17270777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:53:0,120,1800:0,138,255:40,0 chr1 17271957 . C . PASS END=17272101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:32:0,82,1103:0,82,255:40,0 chr1 17272754 . G . PASS END=17272769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 17272770 . T . PASS END=17272770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 17272771 . G . PASS END=17272776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 17272777 . C T, 44.59 PASS DP=16;MQ=176.65;MQRankSum=-1.473;ReadPosRankSum=1.813;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,5,0:0.312,0.000:16:5,3,0:6,2,0:44:79,0,50,171,393,564:138,0,255:11,0:4.4589e+01,1.7266e-04,5.3000e+01,1.7083e+02,4.2804e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,2,3:5,6,2,3 chr1 17272778 . G . PASS END=17272779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 17272780 . G . PASS END=17272780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 17272781 . C . PASS END=17272781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 17272782 . T . PASS END=17272782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 17272783 . C . PASS END=17272786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 17272787 . A . PASS END=17272787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr1 17272788 . T . PASS END=17272789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:17,0 chr1 17272790 . A . PASS END=17272790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,584:0,26,255:16,0 chr1 17272791 . C . PASS END=17272804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,623:0,41,255:18,0 chr1 17272805 . G . PASS END=17272814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr1 17272815 . C . PASS END=17272837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:22,0 chr1 17272838 . C . PASS END=17272838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 17272839 . T . PASS END=17272841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 17272842 . G . PASS END=17272842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 17272843 . C . PASS END=17272859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,662:0,60,255:20,0 chr1 17272860 . T . PASS END=17272867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17272868 . G . PASS END=17272890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,646:0,60,255:20,0 chr1 17272891 . T . PASS END=17272900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 17273256 . C . PASS END=17273358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:39:0,84,1363:0,84,255:40,0 chr1 17273359 . A . PASS END=17273395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,111,1665:0,122,255:40,0 chr1 17273396 . A G, 49.84 PASS DP=43;MQ=204.01;MQRankSum=-3.941;ReadPosRankSum=3.967;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:10,12,0:12,8,0:48:85,0,50,715,750,1465:255,0,255:21,0:4.9842e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,15,12,8:9,13,10,10 chr1 17273397 . C . PASS END=17273431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1296:0,84,255:40,0 chr1 17273432 . G . PASS END=17273443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:33:0,63,945:0,83,255:26,0 chr1 17273444 . G A, 50.00 PASS DP=31;MQ=198.16;MQRankSum=-2.349;ReadPosRankSum=-1.309;FractionInformativeReads=0.968;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,16,0:0.533,0.000:30:5,9,0:9,7,0:48:85,0,50,550,500,1050:255,0,255:12,0:5.0000e+01,6.6786e-05,5.2712e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,4,12:6,8,7,9 chr1 17273445 . C . PASS END=17273445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:21,0 chr1 17273446 . T . PASS END=17273461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:19,0 chr1 17273462 . C . PASS END=17273472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 17273473 . A . PASS END=17273486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,659:0,41,255:19,0 chr1 17274826 . C . PASS END=17274887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1144:0,83,255:40,0 chr1 17274888 . G . PASS END=17274888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1504:0,79,255:38,0 chr1 17274889 . C . PASS END=17275003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,95,255:40,0 chr1 17275004 . A . PASS END=17275006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 17275007 . C . PASS END=17275019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1000:0,68,255:26,0 chr1 17275294 . C . PASS END=17275294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17275295 . T . PASS END=17275295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17275296 . T . PASS END=17275305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 17275306 . A . PASS END=17275306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 17275307 . G . PASS END=17275399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1210:0,87,255:36,0 chr1 17275400 . C . PASS END=17275421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:23:0,60,900:0,68,255:26,0 chr1 17277448 . G . PASS END=17277617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:63:0,120,1800:0,135,255:40,0 chr1 17279797 . G . PASS END=17279846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,490:0,41,255:19,0 chr1 17279847 . G . PASS END=17279848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 17279849 . T . PASS END=17279852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17279853 . G . PASS END=17279874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 17279875 . G . PASS END=17279880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 17279881 . C . PASS END=17279914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 17279915 . T . PASS END=17279915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 17279916 . T . PASS END=17279925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 17279926 . C . PASS END=17279951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 17279952 . C . PASS END=17279971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 17279972 . A . PASS END=17279976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 17280718 . G . PASS END=17280721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 17280722 . T . PASS END=17280722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:12,0 chr1 17280723 . G . PASS END=17280725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr1 17280726 . T . PASS END=17280726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 17280727 . C . PASS END=17280746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 17280747 . G . PASS END=17280747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 17280748 . G . PASS END=17280751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 17280752 . T . PASS END=17280752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:13,0 chr1 17280753 . G . PASS END=17280755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 17280756 . A . PASS END=17280757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,437:0,6,255:15,0 chr1 17280758 . A . PASS END=17280766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:19,0 chr1 17280767 . T . PASS END=17280779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 17280780 . C . PASS END=17280780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 17280781 . A . PASS END=17280791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 17280792 . C . PASS END=17280792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 17280793 . A . PASS END=17280793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 17280794 . T . PASS END=17280794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 17280795 . C . PASS END=17280805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 17280806 . T . PASS END=17280817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,46,255:19,0 chr1 17280818 . A . PASS END=17280819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:13,0 chr1 17280820 . C . PASS END=17280823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 17280824 . A . PASS END=17280824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 17280825 . T . PASS END=17280826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 17280827 . C . PASS END=17280832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 17280833 . G . PASS END=17280833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 17280834 . C . PASS END=17280843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 17280844 . C . PASS END=17280844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 17280845 . A . PASS END=17280845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 17280846 . G . PASS END=17280857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 17281229 . A . PASS END=17281269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,566:0,41,255:19,0 chr1 17281270 . G . PASS END=17281277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 17281278 . G . PASS END=17281300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,44,255:19,0 chr1 17281301 . G . PASS END=17281301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:14,0 chr1 17281302 . C . PASS END=17281303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 17281304 . C . PASS END=17281306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 17281307 . G . PASS END=17281307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 17281308 . A . PASS END=17281308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:13,0 chr1 17281309 . G . PASS END=17281313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 17281314 . G . PASS END=17281329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:35:13:0,35,540:0,35,255:13,0 chr1 17281330 . G . PASS END=17281330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 17281331 . G . PASS END=17281355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 17281356 . A . PASS END=17281372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 17281807 . G . PASS END=17281838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,605:0,51,255:19,0 chr1 17281839 . G . PASS END=17281858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 17281859 . T . PASS END=17281864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17281865 . G . PASS END=17281881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:22,0 chr1 17281882 . C . PASS END=17281928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 17281929 . G . PASS END=17281939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 17281940 . A . PASS END=17281952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 17281953 . C . PASS END=17281953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 17281954 . C . PASS END=17281978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,590:0,48,255:19,0 chr1 17281979 . A . PASS END=17281980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 17281981 . G . PASS END=17281982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 17281983 . C . PASS END=17281996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr1 17281997 . A . PASS END=17281997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 17281998 . T . PASS END=17282037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:12,0 chr1 17282038 . C . PASS END=17282045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 17282492 . C . PASS END=17282496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 17282497 . A . PASS END=17282497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:13,0 chr1 17282498 . G . PASS END=17282499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 17282500 . T . PASS END=17282501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:13,0 chr1 17282502 . G . PASS END=17282505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17282506 . A . PASS END=17282506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:13,0 chr1 17282507 . T . PASS END=17282511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:19,0 chr1 17282512 . A . PASS END=17282512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 17282513 . C . PASS END=17282516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 17282517 . G . PASS END=17282520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 17282521 . A . PASS END=17282521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 17282522 . G . PASS END=17282523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 17282524 . A . PASS END=17282526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 17282527 . T . PASS END=17282527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 17282528 . G . PASS END=17282530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 17282531 . A . PASS END=17282531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr1 17282532 . C . PASS END=17282542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,854:0,61,255:25,0 chr1 17282543 . G . PASS END=17282545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 17282546 . A . PASS END=17282546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:27,0 chr1 17282547 . C . PASS END=17282554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 17282555 . T . PASS END=17282555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 17282556 . G . PASS END=17282557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 17282558 . G . PASS END=17282558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 17282559 . G . PASS END=17282560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 17282561 . C . PASS END=17282561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,2 chr1 17282562 . A . PASS END=17282562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1000:0,24,255:28,2 chr1 17282563 . A . PASS END=17282563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 17282564 . G . PASS END=17282565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17282566 . A . PASS END=17282566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 17282567 . G . PASS END=17282568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 17282569 . C . PASS END=17282569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 17282570 . C . PASS END=17282582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr1 17282583 . A . PASS END=17282583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr1 17282584 . C . PASS END=17282593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 17282594 . G . PASS END=17282646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,63,255:26,0 chr1 17282647 . G . PASS END=17282651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr1 17285078 . A . PASS END=17285083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:25,0 chr1 17285084 . A . PASS END=17285088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 17285089 . G . PASS END=17285089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 17285090 . G . PASS END=17285128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,942:0,81,255:38,0 chr1 17285129 . C . PASS END=17285129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr1 17285130 . T . PASS END=17285240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,93,255:40,0 chr1 17285241 . A . PASS END=17285245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 17287253 . C . PASS END=17287263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 17287264 . C . PASS END=17287265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 17287266 . A . LowGQ END=17287266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr1 17287267 . G . PASS END=17287288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 17287289 . G . PASS END=17287299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 17287300 . G . PASS END=17287300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr1 17287301 . A G, 21.74 PASS DP=7;MQ=198.58;MQRankSum=0.198;ReadPosRankSum=1.495;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,2,0:0.286,0.000:7:5,0,0:0,2,0:22:56,0,50,72,179,250:56,0,173:4,0:2.1738e+01,2.9225e-02,5.3029e+01,7.1557e+01,2.1362e+02,2.5337e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,1,1:3,2,1,1 chr1 17287302 . C . PASS END=17287311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 17287312 . A . PASS END=17287331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 17287332 . A . PASS END=17287338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 17287339 . G . PASS END=17287347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 17287348 . T . PASS END=17287355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 17287356 . A . PASS END=17287367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 17287368 . A . PASS END=17287387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 17287388 . A . LowGQ END=17287388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 17287389 . A . PASS END=17287406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 17287407 . C A, 0.33 DRAGENSnpHardQUAL DP=5;MQ=213.73;MQRankSum=0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:4,1,0:0.200,0.000:5:1,1,0:3,0,0:11:24,0,47,36,143,179:24,0,118:4,0:3.2847e-01,1.1377e+01,6.1368e+01,4.7137e+01,1.8914e+02,1.9313e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,4,1,0:3,1,1,0:17287407 chr1 17287408 . C . PASS END=17287413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr1 17287414 . T C, 50.01 PASS DP=5;MQ=213.73;MQRankSum=-0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:1,4,0:0.800,0.000:5:0,2,0:1,2,0:27:85,0,24,143,36,179:140,0,24:1,0:5.0009e+01,9.2734e-03,2.6731e+01,1.4301e+02,7.0539e+01,1.8177e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,2,2:1,0,2,2:17287407 chr1 17287415 . G . PASS END=17287453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,178:0,15,178:5,0 chr1 17287454 . G . PASS END=17287466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr1 17287467 . A . PASS END=17287467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 17287468 . G . PASS END=17287487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 17287488 . A . PASS END=17287500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:3:0,9,116:0,9,116:3,0 chr1 17287501 . C . PASS END=17287522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 17287523 . G . PASS END=17287552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 17287553 . G . PASS END=17287598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 17287599 . C . PASS END=17287599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 17287600 . C . PASS END=17287601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 17287602 . C . PASS END=17287618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 17287619 . G . LowGQ END=17287619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 17287620 . C . PASS END=17287620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 17287621 . A . PASS END=17287625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 17292218 . G . PASS END=17292228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 17292229 . G . PASS END=17292260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1103:0,87,255:35,0 chr1 17292261 . C . PASS END=17292261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 17292262 . C . PASS END=17292297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1141:0,80,255:33,0 chr1 17292298 . T . PASS END=17292298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1139:0,44,255:30,0 chr1 17292299 . C . PASS END=17292322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1172:0,83,255:32,0 chr1 17292323 . C . PASS END=17292340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,68,255:26,0 chr1 17292341 . C . PASS END=17292357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,653:0,43,255:19,0 chr1 17292358 . C . PASS END=17292358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 17292359 . A . PASS END=17292361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 17292362 . A . PASS END=17292366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 17292367 . C . PASS END=17292375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,495:0,32,255:12,0 chr1 17292376 . C . PASS END=17292376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 17292377 . A . PASS END=17292378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 17292379 . A . PASS END=17292379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr1 17292380 . G . PASS END=17292385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,443:0,39,255:13,0 chr1 17292386 . G . PASS END=17292387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 17292494 . G . PASS END=17292498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 17292499 . A . PASS END=17292499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 17292500 . C . PASS END=17292507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 17292508 . C . PASS END=17292508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 17292509 . C . PASS END=17292549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1033:0,84,255:32,0 chr1 17292550 . T . PASS END=17292550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 17292551 . G . PASS END=17292565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 17292566 . A . PASS END=17292581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:24,0 chr1 17292582 . A . PASS END=17292582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 17292583 . G . PASS END=17292592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:24,0 chr1 17292593 . G . PASS END=17292593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 17292594 . C . PASS END=17292600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 17292601 . T . PASS END=17292614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 17292903 . C . PASS END=17292904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17292905 . C . PASS END=17292905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 17292906 . G . PASS END=17292911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 17292912 . G . PASS END=17293000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:33,0 chr1 17293001 . C . PASS END=17293049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,798:0,63,255:24,0 chr1 17293050 . A . PASS END=17293066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 17294698 . G . PASS END=17294704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:21,0 chr1 17294705 . T . PASS END=17294705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 17294706 . C . PASS END=17294707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 17294708 . G . PASS END=17294708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 17294709 . C . PASS END=17294710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 17294711 . A . PASS END=17294711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 17294712 . G . PASS END=17294722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 17294723 . A . PASS END=17294723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,755:0,69,255:23,0 chr1 17294724 . T . PASS END=17294724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 17294725 . G . PASS END=17294734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:22,0 chr1 17294735 . T . PASS END=17294735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 17294736 . G . PASS END=17294761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 17294762 . A . PASS END=17294790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,46,255:18,0 chr1 17294791 . G . PASS END=17294806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 17294807 . A . PASS END=17294807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 17294808 . G . PASS END=17294821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 17294822 . A . PASS END=17294857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,645:0,44,255:19,0 chr1 17294858 . A . PASS END=17294904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 17294905 . C . PASS END=17294913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 17295611 . G . PASS END=17295627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 17295628 . G . PASS END=17295628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 17295629 . A . PASS END=17295631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 17295632 . G . PASS END=17295632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 17295633 . C . PASS END=17295639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 17295640 . C . PASS END=17295640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 17295641 . C . PASS END=17295641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 17295642 . T . PASS END=17295642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 17295643 . G . PASS END=17295643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 17295644 . C . PASS END=17295654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 17295655 . G . PASS END=17295655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 17295656 . G . PASS END=17295678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,535:0,41,255:19,0 chr1 17295679 . T C, 112.75 PASS DP=22;MQ=231.16;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,10,0:0,12,0:63:151,66,0,821,66,821:255,66,0:0,0:1.1275e+02,6.2751e+01,2.3297e-06,4.5000e+02,9.7521e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,9:0,0,11,11 chr1 17295680 . A . PASS END=17295681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 17295682 . G . PASS END=17295682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17295683 . G . PASS END=17295683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 17295684 . T . PASS END=17295703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 17295704 . C . PASS END=17295705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17295706 . G . PASS END=17295713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 17295714 . A . PASS END=17295715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr1 17295716 . G . PASS END=17295719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 17295720 . G . PASS END=17295725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 17295726 . T . PASS END=17295729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17295730 . A . PASS END=17295730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 17295731 . G . PASS END=17295739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:24,0 chr1 17295740 . G . PASS END=17295742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17295743 . C . PASS END=17295743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 17295744 . A . PASS END=17295763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1094:0,84,255:32,0 chr1 17295764 . A G, 45.96 PASS DP=32;MQ=228.05;MQRankSum=1.304;ReadPosRankSum=1.304;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,12,0:0.375,0.000:32:12,4,0:8,8,0:45:81,0,50,421,658,1079:255,0,255:20,0:4.5963e+01,1.3176e-04,5.3000e+01,4.2115e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,5,7:5,15,7,5 chr1 17295765 . G . PASS END=17295789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1079:0,80,255:31,0 chr1 17295790 . G . PASS END=17295790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 17295791 . C . PASS END=17295796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17295797 . G . PASS END=17295797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 17295798 . C . PASS END=17295798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17295799 . T . PASS END=17295799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 17295800 . C . PASS END=17295801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:30,0 chr1 17295802 . G . PASS END=17295821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1119:0,90,255:30,0 chr1 17295822 . G . PASS END=17295835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:26:0,72,1070:0,74,255:26,0 chr1 17296280 . G . PASS END=17296284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 17296285 . G . PASS END=17296295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 17296296 . C . PASS END=17296296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 17296297 . C . PASS END=17296326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 17296327 . G . PASS END=17296344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 17296345 . G . PASS END=17296347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 17296348 . G . PASS END=17296385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 17296386 . T . PASS END=17296386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 17296387 . G . PASS END=17296394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17296395 . T . PASS END=17296429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 17296748 . G . PASS END=17296753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 17296754 . C . PASS END=17296754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 17296755 . G . PASS END=17296759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 17296760 . C . PASS END=17296780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 17296781 . G . PASS END=17296781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 17296782 . C . PASS END=17296826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,521:0,48,255:17,0 chr1 17296827 . A . PASS END=17296830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 17296831 . G . PASS END=17296852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 17296853 . G . PASS END=17296853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 17296854 . C . PASS END=17296882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,637:0,54,255:18,0 chr1 17296883 . G . PASS END=17296916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:23,0 chr1 17296917 . A . PASS END=17296948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 17297131 . G . PASS END=17297156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,562:0,40,255:19,0 chr1 17297157 . T . PASS END=17297164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 17297165 . C . PASS END=17297166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17297167 . G . PASS END=17297168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17297169 . G . PASS END=17297169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 17297170 . C . PASS END=17297174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 17297175 . G . PASS END=17297215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,635:0,40,255:19,0 chr1 17297216 . C . PASS END=17297219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 17297220 . G . PASS END=17297228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:15,0 chr1 17297229 . G . PASS END=17297251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 17297252 . A . PASS END=17297262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 17297960 . G . PASS END=17297998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 17297999 . C . PASS END=17298021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 17298022 . G . PASS END=17298022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 17298023 . C . PASS END=17298023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 17298024 . A . PASS END=17298024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:12,0 chr1 17298025 . G . PASS END=17298025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17298026 . C . PASS END=17298026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 17298027 . A . PASS END=17298027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 17298028 . G . PASS END=17298028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 17298029 . C . PASS END=17298029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 17298030 . T . PASS END=17298030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr1 17298031 . G . PASS END=17298032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 17298033 . A . PASS END=17298033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 17298034 . G . PASS END=17298034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 17298035 . C . PASS END=17298035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 17298036 . T . PASS END=17298037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 17298038 . C . PASS END=17298039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 17298040 . G . PASS END=17298040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 17298041 . C . PASS END=17298042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 17298043 . G . PASS END=17298044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 17298045 . A . PASS END=17298045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 17298046 . G . PASS END=17298050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 17298051 . A . PASS END=17298051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 17298052 . G . PASS END=17298052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 17298053 . C . PASS END=17298058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 17298059 . C . PASS END=17298059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 17298060 . G . PASS END=17298061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 17298062 . A . PASS END=17298062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 17298063 . G . PASS END=17298082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 17298083 . C . PASS END=17298083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:11,0 chr1 17298084 . G . PASS END=17298118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 17298119 . A . PASS END=17298142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:9,0 chr1 17298855 . G . PASS END=17298881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,272:0,24,255:9,0 chr1 17298882 . C . PASS END=17298887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 17298888 . C . PASS END=17298925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 17298926 . C . PASS END=17298941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 17301415 . C . PASS END=17301423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 17301424 . C . PASS END=17301425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:11:9:0,11,294:0,11,255:9,0 chr1 17301426 . C . PASS END=17301427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 17301428 . C . PASS END=17301428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 17301429 . A . PASS END=17301434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr1 17301435 . T . PASS END=17301469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:13,0 chr1 17301470 . C . PASS END=17301472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17301473 . C . PASS END=17301473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 17301474 . T . PASS END=17301488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 17301489 . A . PASS END=17301493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 17301494 . G . PASS END=17301496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 17301497 . A . PASS END=17301497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 17301498 . A . PASS END=17301518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 17301764 . C . PASS END=17301779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 17301780 . A G, 143.31 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,13,0:0,19,0:93:181,96,0,1241,96,1241:255,96,0:0,0:1.4331e+02,9.3311e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,20:0,0,17,15 chr1 17301781 . T . PASS END=17301817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:32:0,90,1330:0,96,255:38,0 chr1 17301818 . T . PASS END=17301837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1305:0,105,255:37,0 chr1 17302138 . C . PASS END=17302172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1235:0,86,255:40,0 chr1 17302173 . A . PASS END=17302173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1335:0,40,255:36,0 chr1 17302174 . G . PASS END=17302225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:38:0,87,1394:0,87,255:40,0 chr1 17302996 . C . PASS END=17303040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:98:38:0,98,1402:0,98,255:40,0 chr1 17303203 . C . PASS END=17303204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 17303205 . G . PASS END=17303218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,848:0,66,255:26,0 chr1 17303219 . G . PASS END=17303289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,956:0,80,255:35,0 chr1 17303392 . C . PASS END=17303392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1507:0,90,255:40,0 chr1 17303393 . T . PASS END=17303393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1430:0,77,255:40,0 chr1 17303394 . T . PASS END=17303418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:44:0,93,1537:0,93,255:40,0 chr1 17303604 . C . PASS END=17303608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 17303609 . T . PASS END=17303609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 17303610 . G . PASS END=17303626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:24,0 chr1 17303627 . T . PASS END=17303630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,862:0,75,255:25,0 chr1 17303631 . G . PASS END=17303631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 17303632 . G . PASS END=17303636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,953:0,75,255:25,0 chr1 17303637 . G . PASS END=17303637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 17303638 . G . PASS END=17303659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 17303660 . T . PASS END=17303693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,519:0,42,255:19,0 chr1 17304732 . C . PASS END=17304768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,146,255:40,0 chr1 17312473 . T . PASS END=17312473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 17312480 . C . PASS END=17312483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 17312484 . A . PASS END=17312485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 17312486 . T . PASS END=17312489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 17312490 . A . PASS END=17312490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 17312491 . G . PASS END=17312493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 17312494 . G . PASS END=17312495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 17312496 . A . PASS END=17312496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 17312497 . C . PASS END=17312534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 17312535 . G . PASS END=17312551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 17312552 . G . PASS END=17312552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 17312553 . T . PASS END=17312556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17312557 . C . PASS END=17312557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 17312558 . A . PASS END=17312564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:18,0 chr1 17312565 . C . PASS END=17312565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 17312566 . C . PASS END=17312567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 17312568 . C . PASS END=17312569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,568:0,18,255:18,0 chr1 17312570 . G . PASS END=17312572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 17312573 . T . PASS END=17312573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr1 17312574 . G . PASS END=17312578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 17312579 . T . PASS END=17312579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:18,0 chr1 17312580 . G . PASS END=17312594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,746:0,60,255:26,0 chr1 17312595 . G . PASS END=17312595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 17312596 . T . PASS END=17312596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 17312597 . G . PASS END=17312600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 17312601 . A . PASS END=17312601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 17312602 . C . PASS END=17312604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17312605 . T . PASS END=17312605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 17312606 . C . PASS END=17312606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17312607 . G . PASS END=17312607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 17312608 . C . PASS END=17312618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:29,0 chr1 17312619 . G . PASS END=17312620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 17312621 . T . PASS END=17312626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 17312627 . A . PASS END=17312627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 17312628 . G . PASS END=17312690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:31:0,83,1216:0,83,255:39,0 chr1 17312691 . T . PASS END=17312691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1429:0,79,255:36,0 chr1 17312692 . G . PASS END=17312705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:40:0,90,1410:0,90,255:39,0 chr1 17312706 . T . PASS END=17312742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:40:0,93,1395:0,107,255:40,0 chr1 17312743 . C T, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.528;ReadPosRankSum=2.858;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,22,0:0.524,0.000:42:11,13,0:9,9,0:48:85,0,50,758,715,1473:255,0,255:14,0:5.0000e+01,6.6010e-05,5.2842e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,14,8,14:9,11,13,9 chr1 17312744 . G . PASS END=17312780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:32:0,85,1174:0,85,255:33,1 chr1 17312781 . T . PASS END=17312820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:31,0 chr1 17312821 . C . PASS END=17312822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 17312823 . G . PASS END=17312825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 17312826 . A . PASS END=17312826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 17312827 . G . PASS END=17312827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17312828 . G . PASS END=17312851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,70,255:26,0 chr1 17312852 . C . PASS END=17312853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr1 17312949 . G . PASS END=17312949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17312958 . C . PASS END=17312973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:85:33:0,85,1172:0,85,255:36,0 chr1 17312974 . C . PASS END=17312974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:35,0 chr1 17312975 . C . PASS END=17312977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1211:0,91,255:36,0 chr1 17312978 . C . PASS END=17312978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr1 17312979 . G . PASS END=17313022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1183:0,81,255:37,0 chr1 17313023 . T . PASS END=17313023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1259:0,75,255:36,0 chr1 17313024 . G . PASS END=17313091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:40,0 chr1 17313092 . C . PASS END=17313117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:25:0,71,1039:0,71,255:26,0 chr1 17313118 . A . PASS END=17313119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 17313120 . G . PASS END=17313126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 17313127 . A . PASS END=17313127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 17313285 . C . PASS END=17313285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17313300 . C . PASS END=17313301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr1 17313302 . T . PASS END=17313303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:30,0 chr1 17313304 . G . PASS END=17313305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:33:0,99,1182:0,99,255:36,0 chr1 17313306 . T . PASS END=17313307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1242:0,91,255:36,0 chr1 17313308 . T . PASS END=17313308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:35,0 chr1 17313309 . A . PASS END=17313329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1274:0,92,255:39,0 chr1 17313330 . C . PASS END=17313330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:36,0 chr1 17313331 . C . PASS END=17313342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,111,1455:0,113,255:40,0 chr1 17313343 . G A, 50.00 PASS DP=43;MQ=249.93;MQRankSum=5.477;ReadPosRankSum=3.673;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,24,0:0.571,0.000:42:9,10,0:9,14,0:48:85,0,48,814,643,1456:255,0,255:15,0:5.0000e+01,7.5329e-05,5.1325e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,9,15:8,10,13,11 chr1 17313344 . G . PASS END=17313380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:41:0,109,1460:0,109,255:40,0 chr1 17313381 . A . PASS END=17313444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1117:0,80,255:40,0 chr1 17313445 . C . PASS END=17313451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,887:0,67,255:25,0 chr1 17313461 . C . PASS END=17313461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:24,0 chr1 17313541 . C . PASS END=17313541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:18,0 chr1 17313542 . A . PASS END=17313554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 17313555 . G . PASS END=17313556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 17313557 . T . PASS END=17313557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr1 17313558 . C . PASS END=17313562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 17313563 . A . PASS END=17313564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,729:0,47,255:20,0 chr1 17313565 . T . PASS END=17313565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:19,0 chr1 17313566 . A . PASS END=17313569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 17313570 . C . PASS END=17313570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 17313571 . C . PASS END=17313575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 17313576 . C . PASS END=17313576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 17313577 . T . PASS END=17313579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 17313580 . A . PASS END=17313580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 17313581 . C . PASS END=17313586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 17313587 . T . PASS END=17313587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 17313588 . C . PASS END=17313590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 17313591 . C . PASS END=17313591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 17313592 . A . PASS END=17313603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 17313604 . A . PASS END=17313604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:18,0 chr1 17313605 . G . PASS END=17313615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 17313616 . C . PASS END=17313616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 17313617 . T . PASS END=17313617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 17313618 . G . PASS END=17313633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:21:0,50,765:0,50,255:19,0 chr1 17313634 . A . PASS END=17313639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 17313640 . G . PASS END=17313640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 17313641 . C . PASS END=17313649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 17313650 . G . PASS END=17313653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 17313654 . C T, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=3.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:4,6,0:6,6,0:48:85,0,50,400,357,758:255,0,255:8,0:5.0000e+01,6.6786e-05,5.2679e+01,4.0038e+02,3.9224e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,5,7:3,7,5,7 chr1 17313655 . A . PASS END=17313682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:23,0 chr1 17313683 . T . PASS END=17313683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 17313684 . G . PASS END=17313684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 17313685 . C . PASS END=17313685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 17313686 . G . PASS END=17313689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 17313690 . C . PASS END=17313691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,875:0,56,255:23,0 chr1 17313692 . T . PASS END=17313735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,815:0,66,255:26,0 chr1 17313736 . A . PASS END=17313736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 17313737 . A . PASS END=17313748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 17313749 . C . PASS END=17313749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,698:0,11,255:19,0 chr1 17313750 . C . PASS END=17313764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:19:0,48,720:0,52,255:18,0 chr1 17314633 . C . PASS END=17314687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1135:0,80,255:37,0 chr1 17314688 . T . PASS END=17314688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:32,0 chr1 17314689 . T . PASS END=17314729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1226:0,89,255:35,0 chr1 17314817 . C . PASS END=17314822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 17314823 . A . PASS END=17314823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 17314824 . C . PASS END=17314826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 17314827 . T . PASS END=17314833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 17314834 . G . PASS END=17314837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17314838 . T . PASS END=17314838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17314839 . C . PASS END=17314904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,870:0,63,255:26,0 chr1 17314905 . C . PASS END=17314929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,878:0,69,255:24,0 chr1 17314930 . A . PASS END=17314939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 17314940 . G . PASS END=17314941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17314942 . G A, 49.17 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=0.959;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,9,0:0.429,0.000:21:3,4,0:9,5,0:48:84,0,50,321,400,722:255,0,255:12,0:4.9175e+01,7.4293e-05,5.3000e+01,3.2148e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,9,4,5:10,2,3,6 chr1 17314943 . C . PASS END=17314959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,623:0,43,255:17,0 chr1 17314960 . C . PASS END=17314961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 17314962 . C . PASS END=17314966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 17314967 . T . PASS END=17314969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 17316176 . G . PASS END=17316176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 17316186 . T . PASS END=17316265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1141:0,80,255:36,0 chr1 17316382 . C . PASS END=17316434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:98:37:0,98,1380:0,98,255:40,0 chr1 17316435 . T . PASS END=17316435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1504:0,74,255:39,0 chr1 17316436 . G . PASS END=17316498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:35:0,87,1395:0,87,255:40,0 chr1 17316622 . C . PASS END=17316622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17316623 . T . PASS END=17316623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:24,0 chr1 17316624 . T . PASS END=17316631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,970:0,67,255:26,0 chr1 17316632 . T . PASS END=17316632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:23,0 chr1 17316633 . T . PASS END=17316638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 17316639 . C . PASS END=17316641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:29,0 chr1 17316642 . T . PASS END=17316642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 17316643 . G . PASS END=17316645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 17316646 . G . PASS END=17316646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1031:0,59,255:29,0 chr1 17316647 . G . PASS END=17316647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 17316648 . A . PASS END=17316648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:28,0 chr1 17316649 . C . PASS END=17316661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1133:0,93,255:31,0 chr1 17316662 . A . PASS END=17316662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 17316663 . A . PASS END=17316663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17316664 . C . PASS END=17316664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 17316665 . T . PASS END=17316675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:31,0 chr1 17316676 . A . PASS END=17316676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1108:0,49,255:26,0 chr1 17316677 . G . PASS END=17316679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:28,0 chr1 17316680 . T . PASS END=17316703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,915:0,72,255:25,0 chr1 17316704 . T . PASS END=17316704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 17316705 . G . PASS END=17316706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 17316707 . A . PASS END=17316707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 17316708 . C . PASS END=17316718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 17316719 . T . PASS END=17316719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 17316720 . G . PASS END=17316721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 17316722 . T . PASS END=17316722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,783:0,25,255:20,0 chr1 17316723 . C . PASS END=17316737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 17316738 . T . PASS END=17316739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 17316740 . C . PASS END=17316741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 17316742 . A . PASS END=17316767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,47,255:19,0 chr1 17316768 . T . PASS END=17316777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,535:0,31,255:13,0 chr1 17316778 . G . PASS END=17316778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 17316779 . T . PASS END=17316782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 17316790 . T . PASS END=17316790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 17316793 . T . PASS END=17316793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 17318223 . T . PASS END=17318223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 17318229 . C . PASS END=17318230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 17318231 . G . PASS END=17318247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,299:0,30,255:13,0 chr1 17318248 . G . PASS END=17318274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,499:0,42,255:19,0 chr1 17318275 . A . PASS END=17318285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr1 17318286 . T . PASS END=17318286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 17318287 . C . PASS END=17318319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr1 17318320 . C . PASS END=17318320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:21,0 chr1 17318321 . C . PASS END=17318331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 17318332 . C . PASS END=17318332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 17318333 . A . PASS END=17318341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 17318342 . T . PASS END=17318353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 17318504 . C . PASS END=17318506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 17318507 . G . PASS END=17318507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 17318508 . T . PASS END=17318520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 17318521 . T . PASS END=17318521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 17318522 . G . PASS END=17318532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 17318533 . G . PASS END=17318568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 17318569 . G . PASS END=17318574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 17318575 . G . PASS END=17318582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr1 17318583 . C . PASS END=17318612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 17318613 . A . PASS END=17318613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 17318614 . G . PASS END=17318622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 17318623 . C . PASS END=17318624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 17318738 . C . PASS END=17318739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,714:0,46,255:19,0 chr1 17318740 . G . PASS END=17318750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,898:0,66,255:24,0 chr1 17318751 . G . PASS END=17318751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 17318752 . C . PASS END=17318776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr1 17318777 . A . PASS END=17318777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 17318778 . G . PASS END=17318794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:31,0 chr1 17318795 . C . PASS END=17318795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 17318796 . G . PASS END=17318808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,93,255:32,0 chr1 17318809 . C . PASS END=17318809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr1 17318810 . C . PASS END=17318823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 17318824 . A . PASS END=17318834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,87,255:26,0 chr1 17318835 . G . PASS END=17318839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 17318840 . G . PASS END=17318897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,931:0,64,255:26,0 chr1 17318980 . C . PASS END=17318985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:31,0 chr1 17318986 . C . PASS END=17318986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1064:0,57,255:31,0 chr1 17318987 . C . PASS END=17319010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1150:0,86,255:34,0 chr1 17319011 . G A, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,19,0:0,17,0:105:193,108,0,1386,108,1386:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,16:0,0,21,15 chr1 17319012 . G . PASS END=17319048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:39:0,93,1324:0,93,255:40,0 chr1 17319049 . A . PASS END=17319076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:39:0,96,1440:0,101,255:40,0 chr1 17320122 . A . PASS END=17320122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 17320124 . C . PASS END=17320127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 17320128 . C . PASS END=17320148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 17320149 . A . PASS END=17320149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 17320150 . A . PASS END=17320174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:18,0 chr1 17320175 . G . PASS END=17320183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 17320184 . C . PASS END=17320206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 17320207 . C . PASS END=17320244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,762:0,60,255:22,0 chr1 17320245 . G . PASS END=17320245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 17320246 . G . PASS END=17320246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:18,0 chr1 17320247 . C . PASS END=17320248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 17320249 . C . PASS END=17320282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 17320283 . G . PASS END=17320296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 17320297 . T . PASS END=17320299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 17320300 . C . PASS END=17320301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 17320302 . T . PASS END=17320312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:14:0,36,540:0,42,255:13,0 chr1 17320313 . C . PASS END=17320329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:8:0,21,315:0,24,255:9,0 chr1 17320330 . T . PASS END=17320330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 17322354 . C . PASS END=17322355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 17322356 . A . PASS END=17322373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 17322374 . T . PASS END=17322387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 17322388 . A . PASS END=17322390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 17322391 . G . PASS END=17322427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:19,0 chr1 17322428 . T . PASS END=17322437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 17322438 . G . PASS END=17322450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 17322451 . A . PASS END=17322485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:24,0 chr1 17322486 . C . PASS END=17322486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 17322487 . A . PASS END=17322500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 17322501 . C . PASS END=17322502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17322503 . C . PASS END=17322509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,86,255:26,0 chr1 17322510 . G . PASS END=17322512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17322513 . G . PASS END=17322515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17322516 . C . PASS END=17322529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:28,0 chr1 17322530 . A . PASS END=17322575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 17322576 . C . PASS END=17322577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 17322578 . C . PASS END=17322600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,930:0,62,255:26,0 chr1 17322601 . G . PASS END=17322601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 17322602 . G . PASS END=17322616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,876:0,69,255:24,0 chr1 17322617 . T . PASS END=17322617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 17322618 . C . PASS END=17322629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr1 17322630 . A . PASS END=17322630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,748:0,58,255:24,0 chr1 17322631 . G . PASS END=17322637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr1 17322638 . T . PASS END=17322639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 17322640 . A . PASS END=17322659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 17322729 . A . PASS END=17322729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 17322734 . A . PASS END=17322734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,657:0,30,255:18,0 chr1 17322749 . C . PASS END=17322750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 17322751 . G . PASS END=17322751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 17322752 . G . PASS END=17322752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 17322753 . T . PASS END=17322753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:22,0 chr1 17322754 . T . PASS END=17322766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:23,0 chr1 17322767 . G . PASS END=17322773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 17322774 . C . PASS END=17322775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 17322776 . G . PASS END=17322776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 17322777 . T . PASS END=17322777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 17322778 . A . PASS END=17322782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:20:0,49,753:0,49,255:19,0 chr1 17322783 . G . PASS END=17322788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 17322789 . A . PASS END=17322795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,723:0,47,255:19,0 chr1 17322809 . G . PASS END=17322809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 17322876 . C . PASS END=17322876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 17322881 . C . PASS END=17322883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 17322884 . G . PASS END=17322884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17322885 . G . PASS END=17322885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 17322886 . A . PASS END=17322888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17322889 . G . PASS END=17322889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 17322890 . A . PASS END=17322890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17322891 . G . PASS END=17322891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 17322892 . A . PASS END=17322892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17322893 . G . PASS END=17322893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 17322894 . G . PASS END=17322894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 17322895 . G . PASS END=17322895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 17322896 . C . PASS END=17322899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 17322900 . C . PASS END=17322900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 17322901 . A . PASS END=17322909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,672:0,60,255:21,0 chr1 17322910 . A . PASS END=17322910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 17322911 . T . PASS END=17322911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 17322912 . G . PASS END=17322912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 17322913 . C . PASS END=17322916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 17322917 . G . PASS END=17322917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 17322918 . T . PASS END=17322921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 17322922 . T . PASS END=17322933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 17322934 . T . PASS END=17322934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 17322935 . T . PASS END=17322939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 17322940 . G . PASS END=17322945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17322946 . G . PASS END=17322961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,651:0,47,255:17,0 chr1 17322962 . T . PASS END=17322962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 17322963 . C . PASS END=17322968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 17322969 . G . PASS END=17322969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 17322970 . C . PASS END=17322975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 17322976 . T . PASS END=17322976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,458:0,31,255:14,0 chr1 17322977 . T . PASS END=17322978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 17322979 . G . PASS END=17322991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 17323515 . C . PASS END=17323537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 17323538 . A . PASS END=17323542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17323543 . C . PASS END=17323544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 17323545 . G . PASS END=17323553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 17323554 . A . PASS END=17323555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1131:0,77,255:26,0 chr1 17323556 . G . PASS END=17323556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1116:0,30,255:28,0 chr1 17323557 . C . PASS END=17323558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 17323559 . C . PASS END=17323561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1192:0,83,255:30,0 chr1 17323562 . G . PASS END=17323562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 17323563 . C . PASS END=17323564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1194:0,86,255:32,0 chr1 17323565 . T . PASS END=17323565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:33,0 chr1 17323566 . G . PASS END=17323570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1241:0,86,255:34,0 chr1 17323571 . A . PASS END=17323571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1165:0,58,255:32,0 chr1 17323572 . T . PASS END=17323573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1181:0,88,255:33,0 chr1 17323574 . A . PASS END=17323574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:32,0 chr1 17323575 . G . PASS END=17323579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:35,0 chr1 17323580 . C . PASS END=17323580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:35,0 chr1 17323581 . C . PASS END=17323654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1155:0,80,255:39,0 chr1 17323655 . A . PASS END=17323669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr1 17323670 . C . PASS END=17323670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 17323676 . G . PASS END=17323676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 17326500 . G . PASS END=17326500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 17326506 . C . PASS END=17326509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:30,0 chr1 17326510 . C . PASS END=17326510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 17326511 . A . PASS END=17326514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17326515 . A . PASS END=17326515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:29,0 chr1 17326516 . G . PASS END=17326538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1156:0,83,255:35,0 chr1 17326539 . C . PASS END=17326539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:34,0 chr1 17326540 . G A, 49.80 PASS DP=34;MQ=250.00;MQRankSum=4.951;ReadPosRankSum=4.951;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,16,0:0.471,0.000:34:6,10,0:12,6,0:48:85,0,50,572,615,1187:255,0,255:18,0:4.9797e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,9,7:9,9,7,9 chr1 17326541 . G . PASS END=17326577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:35:0,105,1341:0,105,255:40,0 chr1 17326578 . C . PASS END=17326637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1227:0,89,255:40,0 chr1 17326741 . C . PASS END=17326741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17326742 . T . PASS END=17326742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,609:0,18,255:20,0 chr1 17326743 . C . PASS END=17326743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 17326744 . C . PASS END=17326744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 17326745 . C . PASS END=17326745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:20,0 chr1 17326746 . C . PASS END=17326746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 17326747 . C . PASS END=17326747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 17326748 . T . LowGQ END=17326748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,676:19,0,255:22,0 chr1 17326749 . G . PASS END=17326749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,772:0,36,255:23,0 chr1 17326750 . G . PASS END=17326751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 17326752 . C . PASS END=17326752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 17326753 . G . PASS END=17326753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,787:0,36,255:23,0 chr1 17326754 . G . PASS END=17326754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,814:0,9,255:24,0 chr1 17326755 . C . PASS END=17326755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17326756 . A . PASS END=17326756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:25,0 chr1 17326757 . C . PASS END=17326757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 17326758 . A . LowGQ END=17326759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:0:28:0,0,729:0,0,255:24,0 chr1 17326760 . G . PASS END=17326760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,828:0,45,255:25,0 chr1 17326761 . C . PASS END=17326761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17326762 . A . PASS END=17326762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:26,0 chr1 17326763 . C . PASS END=17326764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 17326765 . C . PASS END=17326765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,942:0,51,255:26,0 chr1 17326766 . C . PASS END=17326766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 17326767 . C . PASS END=17326767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17326768 . G . PASS END=17326768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,884:0,26,255:25,0 chr1 17326769 . C . PASS END=17326770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 17326771 . T . PASS END=17326772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:1:30:0,1,786:0,1,255:25,0 chr1 17326773 . G . PASS END=17326773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 17326774 . A . PASS END=17326774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:26,0 chr1 17326775 . C . PASS END=17326776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:67:28:0,67,939:0,67,255:26,0 chr1 17326777 . A . PASS END=17326778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:26,0 chr1 17326779 . T . PASS END=17326779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,738:0,17,255:24,0 chr1 17326780 . T . PASS END=17326780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:25,0 chr1 17326781 . G . PASS END=17326789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:25,0 chr1 17326790 . C . PASS END=17326790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,876:0,34,255:21,0 chr1 17326791 . C . PASS END=17326791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 17326792 . T . PASS END=17326792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,862:0,47,255:22,0 chr1 17326793 . T . PASS END=17326793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 17326794 . A . PASS END=17326794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,876:0,61,255:22,0 chr1 17326795 . G . PASS END=17326796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,815:0,36,255:22,0 chr1 17326797 . G . PASS END=17326798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:52:23:0,52,792:0,52,255:22,0 chr1 17326799 . C . PASS END=17326805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17326806 . T . PASS END=17326806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 17326807 . G . PASS END=17326807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 17326811 . T . PASS END=17326811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17326895 . C . PASS END=17326901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 17326902 . G . PASS END=17326911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 17326912 . G . PASS END=17326912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 17326913 . C . PASS END=17326916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 17326917 . A . PASS END=17326917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 17326918 . G . PASS END=17326922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1143:0,93,255:32,0 chr1 17326923 . A . PASS END=17326923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr1 17326924 . T . PASS END=17326928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:33,0 chr1 17326929 . A . PASS END=17326929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 17326930 . T . PASS END=17326932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:34,0 chr1 17326933 . A . PASS END=17326933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:32,0 chr1 17326934 . G . PASS END=17326947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:37,0 chr1 17326948 . T . PASS END=17326948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:35,0 chr1 17326949 . G . PASS END=17326974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1180:0,91,255:37,0 chr1 17326975 . C . PASS END=17326975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 17326976 . A . PASS END=17326980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 17326981 . G . PASS END=17326981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 17326982 . C . PASS END=17326998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 17326999 . A . PASS END=17327026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,806:0,63,255:25,0 chr1 17327027 . T . PASS END=17327029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 17327032 . G . PASS END=17327032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 17328529 . C . PASS END=17328536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,986:0,78,255:26,0 chr1 17328537 . C . PASS END=17328537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 17328538 . C . PASS END=17328545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:26,0 chr1 17328546 . G . PASS END=17328546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 17328547 . G . PASS END=17328547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 17328548 . G . PASS END=17328561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:28,0 chr1 17328562 . C . PASS END=17328564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 17328565 . T . PASS END=17328566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17328567 . T . PASS END=17328567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 17328568 . G . PASS END=17328580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 17328581 . G . PASS END=17328598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:25,0 chr1 17328791 . C . PASS END=17328835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:35:0,81,1241:0,81,255:38,0 chr1 17328836 . A . PASS END=17328836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:30,0 chr1 17328837 . C . PASS END=17328845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1258:0,89,255:32,0 chr1 17328846 . A . PASS END=17328846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:30,0 chr1 17328847 . A . PASS END=17328852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1083:0,96,255:33,0 chr1 17328853 . G . PASS END=17328853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr1 17328854 . C . PASS END=17328861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:31,0 chr1 17328862 . C . PASS END=17328862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 17328863 . A . PASS END=17328865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17328866 . A . PASS END=17328869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:67:28:0,67,947:0,67,255:26,0 chr1 17330827 . C . PASS END=17330906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:35:0,96,1319:0,97,255:40,0 chr1 17331185 . A . PASS END=17331185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17331187 . C . PASS END=17331301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1025:0,84,255:40,0 chr1 17331302 . G . PASS END=17331316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 17331509 . C . PASS END=17331567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1172:0,85,255:35,0 chr1 17331869 . C . PASS END=17331895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:22,0 chr1 17331896 . T . PASS END=17331896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 17331897 . G . PASS END=17331899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 17331900 . T . PASS END=17331900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 17331901 . C . PASS END=17331906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17331907 . G . PASS END=17331907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 17331908 . G . PASS END=17331913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,823:0,69,255:26,0 chr1 17331914 . G . PASS END=17331914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 17331915 . T . PASS END=17331915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 17331916 . T . PASS END=17331917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 17331918 . C . PASS END=17331941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:26,0 chr1 17331942 . C . PASS END=17331945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr1 17331946 . A . PASS END=17331946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 17331947 . C . PASS END=17331949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17331950 . G . PASS END=17331950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 17331951 . G . PASS END=17331973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1221:0,90,255:33,0 chr1 17331974 . A . PASS END=17331974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1054:0,52,255:30,0 chr1 17331975 . G . PASS END=17331983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:33,0 chr1 17331984 . G . PASS END=17331984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1135:0,75,255:30,0 chr1 17331985 . C . PASS END=17331987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 17331988 . T . PASS END=17331988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:30,0 chr1 17331989 . C . PASS END=17331990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 17331991 . T . PASS END=17331991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:33,0 chr1 17331992 . C . PASS END=17332009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1295:0,95,255:34,0 chr1 17332010 . G . PASS END=17332010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 17332011 . C . PASS END=17332030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1149:0,82,255:33,0 chr1 17332031 . G . PASS END=17332031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,950:0,49,255:27,0 chr1 17332032 . C . PASS END=17332034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:30,0 chr1 17332035 . C . PASS END=17332035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:29,0 chr1 17332036 . A . PASS END=17332039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1082:0,82,255:30,0 chr1 17332040 . G . PASS END=17332042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:30:0,65,1036:0,65,255:27,0 chr1 17332043 . G . PASS END=17332044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:26,0 chr1 17332045 . T . PASS END=17332046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17332047 . A . PASS END=17332051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:29:0,60,948:0,60,255:25,0 chr1 17332059 . C . PASS END=17332059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:22,0 chr1 17332179 . C . PASS END=17332264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:35:0,89,1271:0,89,255:40,0 chr1 17332265 . G . PASS END=17332273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1194:0,86,255:33,0 chr1 17338224 . C . PASS END=17338226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 17338227 . C . PASS END=17338240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,315:0,20,255:9,0 chr1 17338241 . C . PASS END=17338241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr1 17338242 . C . PASS END=17338245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 17338246 . C . LowGQ END=17338247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:7,0 chr1 17338248 . C . PASS END=17338248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 17338249 . T . PASS END=17338250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 17338251 . A . PASS END=17338251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 17338252 . T . PASS END=17338252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 17338332 . C . PASS END=17338332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 17338384 . G . PASS END=17338384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 17338404 . C . PASS END=17338404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 17345192 . C . PASS END=17345192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr1 17345243 . A . PASS END=17345243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 17345274 . T . PASS END=17345274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 17345376 . T . PASS END=17345453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,156,255:40,0 chr1 17349069 . T . PASS END=17349069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 17349098 . C . PASS END=17349098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17349099 . G . PASS END=17349100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17349103 . C . PASS END=17349227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1217:0,81,255:40,0 chr1 17349235 . C . PASS END=17349235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 17350461 . A . PASS END=17350461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 17350463 . C . PASS END=17350469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,670:0,41,255:19,0 chr1 17350470 . G . PASS END=17350478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 17350479 . C . PASS END=17350479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 17350480 . T . PASS END=17350480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 17350481 . G . PASS END=17350481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 17350482 . C . PASS END=17350483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 17350484 . G . PASS END=17350484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 17350485 . G . PASS END=17350488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 17350489 . C . PASS END=17350489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 17350490 . A . PASS END=17350494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 17350495 . T . PASS END=17350495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 17350496 . T . PASS END=17350497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 17350498 . G . PASS END=17350499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,834:0,64,255:26,0 chr1 17350500 . C . PASS END=17350501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 17350502 . C . PASS END=17350502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:26,0 chr1 17350503 . C . PASS END=17350504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 17350505 . T . PASS END=17350512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 17350513 . G . PASS END=17350515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 17350516 . G . PASS END=17350516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 17350517 . C . PASS END=17350517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17350518 . T . PASS END=17350518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr1 17350519 . G . PASS END=17350519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17350520 . G . PASS END=17350520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 17350521 . G . PASS END=17350522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17350523 . C . PASS END=17350537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 17350538 . C . PASS END=17350538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 17350539 . A . PASS END=17350539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17350540 . G . PASS END=17350540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 17350541 . G . PASS END=17350545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 17350546 . G . PASS END=17350546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 17350547 . A . PASS END=17350552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 17350553 . C . PASS END=17350564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:19,0 chr1 17350565 . C . PASS END=17350572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 17350577 . G . PASS END=17350577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 17354230 . T . PASS END=17354230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 17354233 . G . PASS END=17354233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1335:0,105,255:35,0 chr1 17354236 . C . PASS END=17354236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1418:0,111,255:37,0 chr1 17354239 . A . PASS END=17354240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1366:0,111,255:37,0 chr1 17354243 . C . PASS END=17354361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:90:38:0,90,1263:0,90,255:40,0 chr1 17354363 . G . PASS END=17354363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr1 17354365 . G . PASS END=17354365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr1 17354373 . G . PASS END=17354373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:19:43:0,19,1341:0,19,255:34,3 chr1 17355094 . C . PASS END=17355235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:38:0,87,1271:0,87,255:40,0 chr1 17359552 . C . PASS END=17359638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,120,1800:0,127,255:40,0 chr1 17359639 . A . PASS END=17359640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr1 17359642 . T . PASS END=17359642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 17359650 . A . PASS END=17359650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 17371251 . C . PASS END=17371253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:23,0 chr1 17371256 . T . PASS END=17371259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 17371260 . T . PASS END=17371260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 17371261 . A . PASS END=17371261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 17371262 . A . PASS END=17371262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 17371263 . G . PASS END=17371263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 17371264 . G . PASS END=17371264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 17371265 . T . PASS END=17371267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 17371268 . A . PASS END=17371268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,595:0,13,255:21,0 chr1 17371269 . C . PASS END=17371276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 17371277 . G . PASS END=17371277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17371278 . T . PASS END=17371278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17371279 . C . PASS END=17371358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1080:0,86,255:37,0 chr1 17371359 . C . PASS END=17371378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:26,0 chr1 17371379 . G . PASS END=17371384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 17371388 . A . PASS END=17371390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:15,0 chr1 17371392 . T . PASS END=17371392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 17371636 . T . PASS END=17371647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,163,255:40,0 chr1 17371648 . A . PASS END=17371665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,158,255:40,0 chr1 17380438 . C . PASS END=17380440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1274:0,102,255:35,0 chr1 17380442 . C . PASS END=17380449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1268:0,105,255:35,0 chr1 17380450 . C . PASS END=17380450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:34,0 chr1 17380451 . A . PASS END=17380459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1327:0,95,255:38,0 chr1 17380460 . C . PASS END=17380496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1410:0,81,255:40,0 chr1 17380497 . G T, 176.41 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,26,0:0,17,0:126:214,129,0,1649,129,1649:255,129,0:0,0:1.7641e+02,1.2641e+02,0.0000e+00,4.5000e+02,1.6118e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,20:0,0,22,21 chr1 17380498 . G . PASS END=17380514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1432:0,87,255:40,0 chr1 17380519 . G . PASS END=17380519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 17380595 . C . PASS END=17380595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 17380649 . C . PASS END=17380649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 17380656 . T . PASS END=17380656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 17395281 . T C, 48.83 PASS DP=45;MQ=250.00;MQRankSum=5.699;ReadPosRankSum=2.547;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,20,0:0.444,0.000:45:10,13,0:15,7,0:47:84,0,50,678,886,1564:255,0,255:24,0:4.8828e+01,7.8694e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,10,10,10:14,11,9,11 chr1 17395539 . T . PASS END=17395558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:39:0,85,1490:0,85,255:40,0 chr1 17395559 . A . PASS END=17395714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:35:0,87,1305:0,100,255:40,0 chr1 17395715 . C . PASS END=17395715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:31,0 chr1 17395716 . C . PASS END=17395744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1149:0,82,255:33,0 chr1 17395745 . G . PASS END=17395762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 17395763 . T . PASS END=17395763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,795:0,36,255:20,0 chr1 17395764 . C . PASS END=17395764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,833:0,44,255:20,0 chr1 17395765 . A . PASS END=17395772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 17396583 . C . PASS END=17396586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 17396587 . T . PASS END=17396587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,962:0,60,255:29,0 chr1 17396588 . T . PASS END=17396593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1133:0,93,255:31,0 chr1 17396594 . A . PASS END=17396594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,975:0,54,255:30,0 chr1 17396595 . G . PASS END=17396601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,92,255:31,0 chr1 17396602 . C . PASS END=17396602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 17396603 . T . PASS END=17396629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1180:0,83,255:33,0 chr1 17396630 . A . PASS END=17396632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 17396633 . G . PASS END=17396639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:28,0 chr1 17396640 . C . PASS END=17396642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:28:0,78,1170:0,84,255:26,0 chr1 17396643 . G . PASS END=17396646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 17396647 . A . PASS END=17396647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:27,0 chr1 17396648 . T . PASS END=17396649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 17396650 . A . PASS END=17396651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 17396652 . G . PASS END=17396653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17396654 . C . PASS END=17396654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:26,0 chr1 17396655 . C . PASS END=17396655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17396656 . T . PASS END=17396656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 17396657 . G . PASS END=17396658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17396659 . T . PASS END=17396659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17396660 . C . PASS END=17396665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17396666 . G . PASS END=17396674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 17396675 . C . PASS END=17396690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:23,0 chr1 17396691 . A . PASS END=17396702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 17396703 . T C, 48.97 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=2.931;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:7,3,0:4,5,0:48:84,0,50,286,393,680:253,0,255:9,0:4.8967e+01,7.6882e-05,5.3000e+01,2.8618e+02,4.2812e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,1,7:5,6,6,2 chr1 17396704 . A . PASS END=17396711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:16,0 chr1 17397901 . C . PASS END=17397974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,86,255:38,0 chr1 17397975 . T . PASS END=17397978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:26,0 chr1 17397979 . A . PASS END=17397981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:27,0 chr1 17397982 . C . PASS END=17397986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 17401351 . C . PASS END=17401357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 17401358 . C . PASS END=17401359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 17401360 . T . PASS END=17401360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 17401361 . G . PASS END=17401363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 17401364 . G . PASS END=17401364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:25,0 chr1 17401365 . G . PASS END=17401365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:24,0 chr1 17401366 . C . PASS END=17401367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17401368 . T . PASS END=17401368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 17401369 . C . PASS END=17401370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17401371 . C . PASS END=17401371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 17401372 . C . PASS END=17401372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17401373 . A . PASS END=17401373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 17401374 . T . PASS END=17401391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1050:0,80,255:32,0 chr1 17401392 . T . PASS END=17401392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:30,0 chr1 17401393 . C . PASS END=17401398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:32,0 chr1 17401399 . A . PASS END=17401399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 17401400 . G . PASS END=17401400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 17401401 . A . PASS END=17401401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,980:0,57,255:31,0 chr1 17401402 . G . PASS END=17401421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1225:0,86,255:32,0 chr1 17401422 . C . PASS END=17401422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:26,0 chr1 17401423 . T . PASS END=17401423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17401424 . G . PASS END=17401444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,939:0,75,255:26,0 chr1 17402174 . C . PASS END=17402178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 17402179 . T . PASS END=17402179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 17402180 . G . PASS END=17402196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 17402197 . A . PASS END=17402200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,821:0,66,255:26,0 chr1 17402201 . C . PASS END=17402201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 17402202 . A . PASS END=17402208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,937:0,65,255:26,0 chr1 17402209 . C . PASS END=17402217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1096:0,84,255:30,0 chr1 17402218 . G . PASS END=17402251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1127:0,80,255:31,0 chr1 17402252 . G . PASS END=17402253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1041:0,73,255:27,0 chr1 17402254 . G . PASS END=17402254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17402255 . C T, 49.93 PASS DP=31;MQ=250.00;MQRankSum=4.724;ReadPosRankSum=3.656;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,15,0:0.484,0.000:31:7,11,0:9,4,0:48:85,0,50,536,572,1108:255,0,255:14,0:4.9927e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,5,10:7,9,7,8 chr1 17402256 . G . PASS END=17402267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:30,0 chr1 17402268 . T . PASS END=17402288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:25:0,62,930:0,62,255:26,0 chr1 17402289 . A . PASS END=17402292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 17402293 . C . PASS END=17402309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,53,255:19,0 chr1 17402310 . C . PASS END=17402318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 17405755 . T . PASS END=17405771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,119,1689:0,119,255:40,0 chr1 17405772 . T . PASS END=17405808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,123,255:40,0 chr1 17405809 . G A, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.612;ReadPosRankSum=3.596;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,33,0:0.550,0.000:60:10,18,0:17,15,0:48:85,0,49,1135,964,2100:255,0,255:24,0:5.0000e+01,6.9634e-05,5.2189e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,16,18,15:14,13,15,18 chr1 17405810 . T . PASS END=17405846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,150,255:40,0 chr1 17405847 . A . PASS END=17405878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,120,1800:0,127,255:40,0 chr1 17405879 . G . PASS END=17405910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,117,1755:0,132,255:40,0 chr1 17405949 . C T, 49.46 PASS DP=47;MQ=249.77;MQRankSum=5.226;ReadPosRankSum=0.662;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,21,0:0.457,0.000:46:13,13,0:12,8,0:48:84,0,50,743,829,1571:255,0,255:23,0:4.9464e+01,7.0928e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,6,15:12,13,8,13:17405916 chr1 17409040 . C . PASS END=17409041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 17409042 . G . PASS END=17409043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 17409044 . A . PASS END=17409044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 17409045 . G . PASS END=17409047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 17409048 . C . PASS END=17409048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 17409049 . C . PASS END=17409054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1035:0,87,255:31,0 chr1 17409055 . A . PASS END=17409085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1174:0,83,255:34,0 chr1 17409086 . G . PASS END=17409087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 17409088 . G . PASS END=17409135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1164:0,85,255:34,0 chr1 17409136 . C . PASS END=17409141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:24,0 chr1 17409142 . T . PASS END=17409142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr1 17409143 . T . PASS END=17409147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1008:0,78,255:26,0 chr1 17409907 . C . PASS END=17410011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,105,1582:0,105,255:40,0 chr1 17410221 . C . PASS END=17410326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:38:0,95,1410:0,95,255:40,0 chr1 17410327 . T . PASS END=17410332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,105,1575:0,123,255:39,0 chr1 17411094 . C . PASS END=17411103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:22,0 chr1 17411104 . A . PASS END=17411104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,648:0,52,255:21,0 chr1 17411105 . C . PASS END=17411105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17411106 . A . PASS END=17411106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,837:0,44,255:23,0 chr1 17411107 . C . PASS END=17411107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17411108 . C . PASS END=17411108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 17411109 . G . PASS END=17411119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 17411120 . C . PASS END=17411121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 17411122 . G . PASS END=17411162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 17411163 . A . PASS END=17411164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 17411165 . G . PASS END=17411175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 17411176 . A . PASS END=17411176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 17411177 . G . PASS END=17411187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 17411188 . G . PASS END=17411197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:18,0 chr1 17413016 . C . PASS END=17413041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:25,0 chr1 17413042 . C . PASS END=17413042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 17413043 . A . PASS END=17413045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr1 17413046 . G . PASS END=17413047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 17413048 . T . PASS END=17413048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 17413049 . G . PASS END=17413056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:30,0 chr1 17413057 . G . PASS END=17413057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 17413058 . G . PASS END=17413083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,981:0,90,255:30,0 chr1 17413084 . A . PASS END=17413089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 17413090 . C . PASS END=17413097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 17413098 . A . PASS END=17413105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 17413106 . C . PASS END=17413113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1015:0,71,255:26,0 chr1 17413114 . C . PASS END=17413114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:25,0 chr1 17413115 . G . PASS END=17413116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17413117 . A . PASS END=17413120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 17413121 . A C, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=3.322;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,15,0:0.577,0.000:26:9,7,0:2,8,0:46:85,0,46,185,185,185:255,0,255:11,0:5.0000e+01,9.8627e-05,4.8964e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,6,8,7:5,6,8,7 chr1 17413122 . C . PASS END=17413122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:25,0 chr1 17413123 . C . PASS END=17413123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:25,0 chr1 17413124 . C . PASS END=17413124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:25,0 chr1 17413125 . G . PASS END=17413127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 17413128 . T . PASS END=17413128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 17413129 . A . PASS END=17413129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,894:0,32,255:26,0 chr1 17413130 . C . PASS END=17413130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 17413131 . T . PASS END=17413131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17413132 . T . PASS END=17413132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 17413133 . G . PASS END=17413133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17413134 . A . PASS END=17413134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 17413135 . C . PASS END=17413135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17413136 . C . PASS END=17413147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1023:0,71,255:26,0 chr1 17413148 . C . PASS END=17413148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,921:0,51,255:23,0 chr1 17413149 . T . PASS END=17413154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 17413155 . C . PASS END=17413155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 17413156 . G . PASS END=17413158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17413159 . C . PASS END=17413159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17413160 . C . PASS END=17413160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 17413161 . A . PASS END=17413166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 17413167 . T . PASS END=17413189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 17413190 . C . PASS END=17413194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 17418903 . T . PASS END=17418903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 17418904 . C . PASS END=17418904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 17418905 . T . PASS END=17418905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 17418906 . C . PASS END=17418906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 17418907 . C . PASS END=17418907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 17418908 . A . PASS END=17418908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 17418909 . C . PASS END=17418909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 17418910 . G . PASS END=17418910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 17418911 . T . PASS END=17418911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 17418912 . A . PASS END=17418912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 17418913 . G . PASS END=17418913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 17418914 . A . PASS END=17418914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 17418915 . A . PASS END=17418918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,872:0,64,255:26,0 chr1 17418919 . G . PASS END=17418919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 17418920 . C . PASS END=17418920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 17418921 . C . PASS END=17418924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 17418925 . T . PASS END=17418925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,854:0,51,255:26,0 chr1 17418926 . T . PASS END=17418932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 17418933 . A . PASS END=17418933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 17418934 . G . PASS END=17418942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr1 17418943 . G . PASS END=17418943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 17418944 . G . PASS END=17418955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:88:31:0,88,1203:0,88,255:34,0 chr1 17418956 . A . PASS END=17418956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 17418957 . C . PASS END=17418957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1333:0,105,255:35,0 chr1 17418958 . T . PASS END=17418958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:34,0 chr1 17418959 . A . PASS END=17418986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,92,255:35,0 chr1 17418987 . G . PASS END=17418990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:29,0 chr1 17418991 . T . PASS END=17418991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 17418992 . T . PASS END=17418993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 17418994 . G . PASS END=17419008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:26,0 chr1 17419009 . C . PASS END=17419009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 17419010 . T . PASS END=17419015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 17419016 . A . PASS END=17419023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,698:0,44,255:18,0 chr1 17419024 . G A, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=1.280;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,11,0:0.579,0.000:19:3,7,0:5,4,0:48:85,0,49,393,257,651:255,0,255:8,0:5.0000e+01,7.1964e-05,5.1806e+01,3.9342e+02,2.9204e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,5,6:6,2,5,6 chr1 17419025 . A . PASS END=17419026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 17419027 . A . PASS END=17419027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:14,0 chr1 17419028 . T . PASS END=17419028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:15,0 chr1 17420062 . C . PASS END=17420068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr1 17420069 . G . PASS END=17420069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17420070 . C . PASS END=17420071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:29,0 chr1 17420072 . G . PASS END=17420078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17420079 . T . PASS END=17420079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 17420080 . T . PASS END=17420166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1089:0,80,255:36,0 chr1 17420167 . A . PASS END=17420179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,68,255:26,0 chr1 17422404 . C . PASS END=17422404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:35,0 chr1 17422405 . T . PASS END=17422465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:36:0,80,1295:0,80,255:40,0 chr1 17429482 . C . PASS END=17429499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:19,0 chr1 17429500 . G . PASS END=17429518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 17429519 . A . PASS END=17429519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 17429520 . A . PASS END=17429537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 17429538 . T . PASS END=17429541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 17429542 . A . PASS END=17429543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17429544 . T . PASS END=17429554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 17431373 . C . PASS END=17431383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 17431384 . T . PASS END=17431384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,1 chr1 17431385 . G . PASS END=17431385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,663:0,22,255:18,1 chr1 17431386 . G . PASS END=17431386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:19,0 chr1 17431387 . C . PASS END=17431389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 17431390 . C . PASS END=17431393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 17431394 . G . PASS END=17431394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 17431395 . C . PASS END=17431418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 17431419 . A . PASS END=17431419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 17431420 . G . PASS END=17431483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,709:0,63,255:23,0 chr1 17431484 . A . PASS END=17431484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 17431485 . T . PASS END=17431488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 17431489 . G . PASS END=17431536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 17431537 . G . PASS END=17431556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,410:0,33,255:13,0 chr1 17444769 . G T, 49.91 PASS DP=23;MQ=249.96;MQRankSum=3.293;ReadPosRankSum=3.293;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:2,9,0:10,2,0:48:85,0,50,393,429,822:255,0,255:12,0:4.9906e+01,6.6010e-05,5.3000e+01,3.9292e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,10,8,3:8,4,8,3 chr1 17445775 . C . PASS END=17445804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 17445805 . A . PASS END=17445805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 17445806 . G . PASS END=17445826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:22,0 chr1 17445827 . G . PASS END=17445846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:18,0 chr1 17445847 . A . PASS END=17445866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 17484166 . G . PASS END=17484166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1458:0,107,255:35,0 chr1 17531713 . A . PASS END=17531804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:37:0,108,1468:0,109,255:40,0 chr1 17548785 . T . PASS END=17548785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr1 17548786 . G . PASS END=17548786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17548787 . A . PASS END=17548790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 17548791 . G . PASS END=17548794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17548795 . A . PASS END=17548795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:19,0 chr1 17548796 . A . PASS END=17548796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17548797 . G . PASS END=17548807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 17548808 . G . PASS END=17548812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17548813 . A . PASS END=17548813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 17548814 . G . PASS END=17548814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17548815 . G . PASS END=17548815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 17548816 . G . PASS END=17548834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:23,0 chr1 17548835 . T . PASS END=17548835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 17548836 . G . PASS END=17548846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 17548847 . T . PASS END=17548848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 17548849 . G . PASS END=17548894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,863:0,72,255:26,0 chr1 17548895 . G . PASS END=17548895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 17548896 . G . PASS END=17548924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 17548925 . T . PASS END=17548927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,853:0,56,255:19,0 chr1 17548928 . C . PASS END=17548940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 17548941 . C . PASS END=17548959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 17548960 . T . PASS END=17548960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,554:0,18,255:18,0 chr1 17548961 . T . PASS END=17548965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:19,0 chr1 17550116 . G . PASS END=17550120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 17550121 . G A, 39.28 PASS DP=30;MQ=250.00;MQRankSum=4.254;ReadPosRankSum=2.444;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,9,0:0.300,0.000:30:11,3,0:10,6,0:39:74,0,50,322,743,1065:236,0,255:21,0:3.9283e+01,5.3406e-04,5.3001e+01,3.2170e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,9,5,4:8,13,3,6 chr1 17550122 . G . PASS END=17550138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1086:0,80,255:32,0 chr1 17550139 . G . PASS END=17550139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr1 17550140 . C . PASS END=17550150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 17550151 . A . PASS END=17550152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 17550153 . C . PASS END=17550154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17550155 . C . PASS END=17550158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 17550159 . G . PASS END=17550187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 17550188 . G . PASS END=17550188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 17550862 . A . PASS END=17550866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 17550867 . T . PASS END=17550867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 17550868 . C . PASS END=17550872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 17550873 . G . PASS END=17550874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17550875 . G . PASS END=17550876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 17550877 . T . PASS END=17550877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 17550878 . T . PASS END=17550881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 17550882 . A . PASS END=17550882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 17550883 . C . PASS END=17550885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 17550886 . G . PASS END=17550886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 17550887 . C . PASS END=17550888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 17550889 . G . PASS END=17550889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 17550890 . C . PASS END=17550923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,870:0,61,255:25,0 chr1 17552306 . A . PASS END=17552403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:30:0,84,1121:0,86,255:40,0 chr1 17552404 . C . PASS END=17552413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:74:30:0,74,1100:0,74,255:26,0 chr1 17552414 . T . PASS END=17552423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 17552528 . A . PASS END=17552546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1177:0,80,255:37,0 chr1 17552547 . A . PASS END=17552547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr1 17552548 . A . PASS END=17552635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1260:0,81,255:40,0 chr1 17552636 . G . PASS END=17552653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 17555120 . G . PASS END=17555130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:25,0 chr1 17555131 . C . PASS END=17555243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,934:0,81,255:40,0 chr1 17555244 . C . PASS END=17555244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 17555245 . G . PASS END=17555245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 17555246 . A . PASS END=17555246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 17555247 . T . PASS END=17555252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17555253 . A . PASS END=17555253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 17555254 . G . PASS END=17555275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 17555276 . G . PASS END=17555278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 17555279 . T . PASS END=17555292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:24,0 chr1 17555443 . A . PASS END=17555447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 17555448 . G . PASS END=17555448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 17555449 . C . PASS END=17555451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17555452 . G . PASS END=17555452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 17555453 . A . PASS END=17555472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,833:0,66,255:24,0 chr1 17555473 . A . PASS END=17555473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 17555474 . C . PASS END=17555511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,756:0,66,255:24,0 chr1 17555512 . A . PASS END=17555516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr1 17555517 . T . PASS END=17555518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17555519 . A . PASS END=17555536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 17555537 . A . PASS END=17555546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:17:0,33,495:0,51,255:13,0 chr1 17556580 . A . PASS END=17556580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 17556581 . G . PASS END=17556605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:31:0,80,1302:0,80,255:37,0 chr1 17556606 . A . PASS END=17556606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1239:0,42,255:35,0 chr1 17556607 . G . PASS END=17556607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 17556608 . A . PASS END=17556608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1256:0,59,255:36,0 chr1 17556609 . A . PASS END=17556701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:37:0,82,1305:0,82,255:40,0 chr1 17556702 . A . PASS END=17556702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1205:0,64,255:27,0 chr1 17556703 . G . PASS END=17556703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 17557067 . G . PASS END=17557075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 17557076 . G . PASS END=17557076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 17557077 . A . PASS END=17557095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 17557096 . C . PASS END=17557109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 17557110 . T . PASS END=17557110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 17557111 . C . PASS END=17557116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 17557117 . G . PASS END=17557117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 17557118 . G . PASS END=17557126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 17557127 . T . PASS END=17557129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 17557130 . C . PASS END=17557131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 17557132 . C . PASS END=17557132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 17557133 . A C, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.793;ReadPosRankSum=1.461;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,7,0:0.583,0.000:12:3,3,0:2,4,0:48:85,0,49,250,150,400:235,0,136:4,0:5.0000e+01,7.0152e-05,5.2101e+01,2.5032e+02,1.8474e+02,4.0329e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,1,6:2,3,3,4 chr1 17557134 . G . PASS END=17557174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,243:0,24,243:9,0 chr1 17559314 . G . PASS END=17559314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 17559315 . G . PASS END=17559320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 17559321 . A . PASS END=17559321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 17559322 . C . PASS END=17559358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,460:0,42,255:19,0 chr1 17559359 . C . PASS END=17559369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 17559370 . T . PASS END=17559370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 17559371 . G . PASS END=17559373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 17559374 . T . PASS END=17559374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 17559375 . C . PASS END=17559382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17559383 . A . PASS END=17559383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 17559384 . A . PASS END=17559389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,726:0,66,255:22,0 chr1 17559390 . A . PASS END=17559390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 17559391 . C . PASS END=17559425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:23,0 chr1 17559426 . A . PASS END=17559434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 17559435 . G . PASS END=17559440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 17559441 . T . PASS END=17559453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 17559454 . C . PASS END=17559456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 17559457 . C . PASS END=17559464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr1 17559465 . A . PASS END=17559465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 17563809 . G . PASS END=17563883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,590:0,45,255:19,0 chr1 17563884 . C . PASS END=17563884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 17563885 . T . PASS END=17563929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 17563930 . T . PASS END=17563930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17563931 . T . PASS END=17563950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:12,0 chr1 17563951 . A . PASS END=17563953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 17565111 . G . PASS END=17565111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17565112 . G . PASS END=17565123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 17565124 . T . PASS END=17565133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:18,0 chr1 17565134 . C . PASS END=17565143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,892:0,72,255:24,0 chr1 17565144 . T . PASS END=17565144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 17565145 . G . PASS END=17565147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17565148 . T . PASS END=17565148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 17565149 . C . PASS END=17565155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,840:0,75,255:26,0 chr1 17565156 . T . PASS END=17565156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 17565157 . T . PASS END=17565204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 17565340 . G . PASS END=17565345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:24,0 chr1 17565346 . T . PASS END=17565348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:23,0 chr1 17565349 . T . PASS END=17565366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:24:0,65,955:0,65,255:26,0 chr1 17565367 . G . PASS END=17565369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17565370 . C . PASS END=17565373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1031:0,71,255:26,0 chr1 17565374 . C . PASS END=17565376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 17565377 . C . PASS END=17565378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 17565379 . G . PASS END=17565379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr1 17565380 . G . PASS END=17565384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 17565385 . G . PASS END=17565387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:34,1 chr1 17565388 . A . PASS END=17565413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,105,1304:0,105,255:40,0 chr1 17565414 . G C, 50.00 PASS DP=41;MQ=249.46;MQRankSum=4.935;ReadPosRankSum=1.389;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,24,0:0.585,0.000:41:7,10,0:10,14,0:47:85,0,47,841,607,1449:255,0,255:16,0:5.0000e+01,8.2577e-05,5.0460e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,11,14,10:10,7,10,14 chr1 17565415 . G . PASS END=17565451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1389:0,81,255:39,0 chr1 17565452 . C . PASS END=17565493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:37:0,92,1360:0,92,255:39,0 chr1 17565494 . A . PASS END=17565530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:37:0,90,1350:0,98,255:40,0 chr1 17565531 . A C, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.181;ReadPosRankSum=3.084;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,19,0:0.514,0.000:37:7,6,0:11,13,0:48:85,0,50,643,641,1284:255,0,255:11,0:5.0000e+01,6.5492e-05,5.2965e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,12,5,14:7,11,10,9 chr1 17565532 . C . PASS END=17565535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 17565536 . G . PASS END=17565561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 17565562 . T . PASS END=17565562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 17565563 . G . PASS END=17565568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 17565569 . T . PASS END=17565572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 17566199 . G . PASS END=17566278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,117,1755:0,139,255:40,0 chr1 17567130 . A . PASS END=17567255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1209:0,89,255:40,0 chr1 17570505 . G . PASS END=17570516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,834:0,75,255:26,0 chr1 17570517 . G . PASS END=17570519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,883:0,81,255:27,0 chr1 17570520 . T . PASS END=17570528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 17570529 . T . PASS END=17570531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 17570532 . C . PASS END=17570532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 17570533 . T . PASS END=17570569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,984:0,81,255:32,0 chr1 17570570 . C . PASS END=17570570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 17570571 . C . PASS END=17570585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 17570586 . G . PASS END=17570589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 17570590 . A . PASS END=17570595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:29,0 chr1 17570596 . A . PASS END=17570596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 17570597 . G . PASS END=17570602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:30,0 chr1 17570603 . G . PASS END=17570603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:28,0 chr1 17570604 . C . PASS END=17570613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 17570614 . T . PASS END=17570617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:26,0 chr1 17570618 . C . PASS END=17570620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17570621 . G . PASS END=17570621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 17570622 . C . PASS END=17570700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1033:0,84,255:35,0 chr1 17570701 . A . PASS END=17570703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 17570704 . C . PASS END=17570708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17570709 . C . PASS END=17570709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:26,0 chr1 17570710 . C . PASS END=17570715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 17570716 . A . PASS END=17570735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 17570736 . T . PASS END=17570738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 17575633 . A . PASS END=17575633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17575634 . T . PASS END=17575634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17575635 . G . PASS END=17575652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:29,0 chr1 17575653 . G . PASS END=17575654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 17575655 . G . PASS END=17575669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 17575670 . A . PASS END=17575670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 17575671 . T . PASS END=17575678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:30,0 chr1 17575679 . G . PASS END=17575679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 17575680 . C . PASS END=17575680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 17575681 . G . PASS END=17575681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:27,0 chr1 17575682 . C . PASS END=17575683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr1 17575684 . G . PASS END=17575702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1194:0,83,255:30,0 chr1 17575703 . A . PASS END=17575716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 17575717 . A . PASS END=17575720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17575721 . A . PASS END=17575724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:25,0 chr1 17586073 . G . PASS END=17586073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 17586074 . T . PASS END=17586075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 17586076 . A . PASS END=17586091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,596:0,48,255:16,0 chr1 17586092 . G . PASS END=17586092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 17586093 . A . PASS END=17586109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,544:0,48,255:19,0 chr1 17586110 . G . PASS END=17586111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 17586112 . G . PASS END=17586112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 17586113 . A . PASS END=17586131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 17586132 . A . PASS END=17586132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 17586133 . C . PASS END=17586134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17586135 . T . PASS END=17586135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,648:0,27,255:20,0 chr1 17586136 . C . PASS END=17586149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,748:0,63,255:22,0 chr1 17586150 . A . PASS END=17586164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 17586165 . G . PASS END=17586165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,620:0,5,255:17,0 chr1 17586166 . T . PASS END=17586171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,706:0,57,255:19,0 chr1 17586172 . C . PASS END=17586173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 17586174 . C . PASS END=17586212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 17586213 . T . PASS END=17586231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,427:0,39,255:13,0 chr1 17586232 . C . PASS END=17586234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 17586235 . T . PASS END=17586235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 17586236 . G . PASS END=17586242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17586243 . A . PASS END=17586243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 17586244 . C . PASS END=17586253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 17588628 . G . PASS END=17588700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:95:36:0,95,1319:0,95,255:40,0 chr1 17592154 . A . PASS END=17592215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,144,255:40,0 chr1 17593214 . C . PASS END=17593331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:40:0,81,1413:0,81,255:40,0 chr1 17594332 . A . PASS END=17594335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,635:0,51,255:18,0 chr1 17594336 . G . PASS END=17594336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 17594337 . G . PASS END=17594343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,607:0,54,255:18,0 chr1 17594344 . T . PASS END=17594352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 17594353 . T . PASS END=17594353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 17594354 . G . PASS END=17594373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,839:0,63,255:26,0 chr1 17594374 . C . PASS END=17594377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 17594378 . A . PASS END=17594378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 17594379 . G . PASS END=17594379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,947:0,54,255:27,0 chr1 17594380 . C . PASS END=17594387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:31,0 chr1 17594388 . G . PASS END=17594388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 17594389 . A . PASS END=17594389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 17594390 . T . PASS END=17594390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 17594391 . G . PASS END=17594391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 17594392 . A . PASS END=17594392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 17594393 . C . PASS END=17594398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 17594399 . A . PASS END=17594399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,908:0,79,255:30,0 chr1 17594400 . C . PASS END=17594400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 17594401 . T . PASS END=17594401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 17594402 . T . PASS END=17594420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1123:0,80,255:31,0 chr1 17594421 . T . PASS END=17594422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 17594423 . T . PASS END=17594427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 17594428 . C . PASS END=17594428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 17594429 . C . PASS END=17594431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 17594432 . A . PASS END=17594457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,67,255:26,0 chr1 17596728 . G . PASS END=17596901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,1008:0,81,255:40,0 chr1 17596902 . A . PASS END=17596902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 17596903 . C . PASS END=17596903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17596904 . G . PASS END=17596905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 17596906 . G . PASS END=17596906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:25,0 chr1 17597372 . A . PASS END=17597372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17597374 . G . PASS END=17597379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17597380 . T . PASS END=17597380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 17597381 . C . PASS END=17597402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,808:0,66,255:27,0 chr1 17597403 . C . PASS END=17597407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 17597408 . T . PASS END=17597408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 17597409 . G . PASS END=17597444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:33,0 chr1 17597445 . C . PASS END=17597445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:28,0 chr1 17597446 . A . PASS END=17597449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 17597450 . T . PASS END=17597451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 17597452 . C . PASS END=17597453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 17597454 . A . PASS END=17597477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:24,0 chr1 17597562 . T . PASS END=17597562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:23,0 chr1 17597563 . G . PASS END=17597617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1148:0,85,255:35,0 chr1 17597618 . G . PASS END=17597654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1251:0,96,255:34,0 chr1 17597655 . C T, 47.54 PASS DP=32;MQ=250.00;MQRankSum=4.719;ReadPosRankSum=3.338;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,13,0:0.406,0.000:32:9,5,0:10,8,0:46:82,0,50,457,664,1120:255,0,255:19,0:4.7542e+01,9.8109e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,7,6:11,8,5,8 chr1 17597656 . A . PASS END=17597665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1094:0,80,255:30,0 chr1 17597666 . G . PASS END=17597666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 17597667 . G . PASS END=17597669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17597670 . C . PASS END=17597673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 17599835 . G . PASS END=17599847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:37,0 chr1 17599848 . T . PASS END=17599848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:36,0 chr1 17599849 . G . PASS END=17599909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:38:0,90,1317:0,90,255:40,0 chr1 17599910 . G . PASS END=17599910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:35,0 chr1 17599911 . A . PASS END=17599942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1402:0,98,255:38,0 chr1 17601130 . G . PASS END=17601131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 17601132 . T . PASS END=17601132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:30,0 chr1 17601133 . C . PASS END=17601175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1037:0,85,255:40,0 chr1 17601176 . T . PASS END=17601176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:68:43:0,68,1520:0,68,255:36,0 chr1 17601177 . G . PASS END=17601236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1197:0,88,255:39,0 chr1 17601237 . A . PASS END=17601237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:29,0 chr1 17601238 . G . PASS END=17601242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:31,0 chr1 17601243 . C . PASS END=17601244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 17601245 . C . PASS END=17601247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:28,0 chr1 17601248 . T . PASS END=17601258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,969:0,65,255:26,0 chr1 17601259 . C . PASS END=17601259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:22,0 chr1 17601260 . T . PASS END=17601267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:23,0 chr1 17601268 . G . PASS END=17601268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 17601269 . G . PASS END=17601277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 17601278 . C . PASS END=17601281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 17603014 . G . PASS END=17603027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:25,0 chr1 17603028 . G . PASS END=17603114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1158:0,83,255:37,0 chr1 17603115 . A . PASS END=17603134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,953:0,75,255:26,0 chr1 17603135 . T . PASS END=17603135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 17603136 . T . PASS END=17603144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 17603145 . C . PASS END=17603145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:22,0 chr1 17603146 . C . PASS END=17603158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 17603269 . G . PASS END=17603275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 17603276 . G . PASS END=17603276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 17603277 . G . PASS END=17603350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1011:0,85,255:35,0 chr1 17603351 . T . PASS END=17603351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:28,0 chr1 17603352 . C . PASS END=17603362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:29,0 chr1 17603363 . G . PASS END=17603363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 17603364 . G . PASS END=17603365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 17603366 . T . PASS END=17603366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 17603367 . T . PASS END=17603369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 17603370 . T . PASS END=17603371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 17606845 . A . PASS END=17606924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:49:0,90,1521:0,90,255:40,0 chr1 17607166 . A . PASS END=17607166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:27,0 chr1 17607167 . G . PASS END=17607167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:27,0 chr1 17607168 . C . PASS END=17607174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 17607175 . G . PASS END=17607175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:25,0 chr1 17607176 . A . PASS END=17607177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 17607178 . T . PASS END=17607192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 17607193 . C . PASS END=17607213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 17607214 . G . PASS END=17607214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 17607215 . C . PASS END=17607229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1070:0,84,255:30,0 chr1 17607230 . T . PASS END=17607230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:27,0 chr1 17607231 . T . PASS END=17607231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1008:0,43,255:25,0 chr1 17607232 . G . PASS END=17607235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:26,0 chr1 17607236 . T . PASS END=17607236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,930:0,18,255:21,0 chr1 17607237 . C . PASS END=17607252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 17607253 . A . PASS END=17607253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,845:0,44,255:22,0 chr1 17607254 . C . PASS END=17607254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 17607255 . C . PASS END=17607255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 17607256 . G . PASS END=17607261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 17607262 . A . PASS END=17607262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 17607263 . A . PASS END=17607282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,848:0,72,255:24,0 chr1 17607283 . C . PASS END=17607291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:41:22:0,41,646:0,41,255:20,0 chr1 17609341 . G . PASS END=17609347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,714:0,44,255:19,0 chr1 17609348 . T . PASS END=17609378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:26,0 chr1 17609379 . C . PASS END=17609380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17609381 . A . PASS END=17609387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17609388 . T . PASS END=17609390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17609391 . G . PASS END=17609410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,873:0,78,255:26,0 chr1 17609411 . G . PASS END=17609441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 17609442 . G . PASS END=17609442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 17609443 . G . PASS END=17609445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 17609446 . C . PASS END=17609446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 17609447 . C . PASS END=17609447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 17609448 . G T, 114.35 PASS DP=23;MQ=240.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,14,0:0,9,0:64:152,67,0,252,252,252:255,69,0:0,0:1.1435e+02,6.4353e+01,1.5532e-06,2.4912e+02,2.8389e+02,2.5213e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,6,17:0,0,9,14 chr1 17609449 . C . PASS END=17609450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 17609451 . G . PASS END=17609467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 17609468 . T . PASS END=17609479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:22,0 chr1 17609480 . T . PASS END=17609485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:15,0 chr1 17609486 . C . PASS END=17609491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:15,0 chr1 17609492 . A . PASS END=17609493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 17609494 . A . PASS END=17609499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 17609500 . C . PASS END=17609504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 17609505 . G . PASS END=17609505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 17609506 . G . PASS END=17609506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 17609507 . A . PASS END=17609508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 17609509 . G . PASS END=17609552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,468:0,45,255:16,0 chr1 17609553 . G . PASS END=17609574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 17634718 . A . PASS END=17634732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1103:0,86,255:34,0 chr1 17634733 . T . PASS END=17634733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:30,0 chr1 17634734 . T . PASS END=17634796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1088:0,81,255:36,0 chr1 17634797 . T . PASS END=17634797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 17634798 . T . PASS END=17634801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 17634802 . A . PASS END=17634802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 17634803 . T . PASS END=17634809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 17657464 . C . PASS END=17657475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr1 17657476 . G . PASS END=17657476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 17657477 . G . PASS END=17657477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 17657478 . A . PASS END=17657478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 17657479 . C . PASS END=17657479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 17657480 . T . PASS END=17657480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 17657481 . G . PASS END=17657481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 17657482 . C . PASS END=17657482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 17657483 . A . PASS END=17657494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:19,0 chr1 17657495 . A . PASS END=17657495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 17657496 . T . PASS END=17657496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17657497 . C . PASS END=17657499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr1 17657500 . C . PASS END=17657500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 17657501 . G . PASS END=17657503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 17657504 . T . PASS END=17657504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 17657505 . C . PASS END=17657515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,911:0,62,255:26,0 chr1 17657516 . G . PASS END=17657517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 17657518 . C . PASS END=17657518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 17657519 . G . PASS END=17657523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 17657524 . T . PASS END=17657524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:28,0 chr1 17657525 . A . PASS END=17657529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 17657530 . C . PASS END=17657530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 17657531 . C . PASS END=17657533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 17657534 . G A, 143.31 PASS DP=32;MQ=249.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,23,0:0,9,0:93:181,96,0,1233,96,1233:255,96,0:0,0:1.4331e+02,9.3308e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,17:0,0,14,18 chr1 17657535 . G . PASS END=17657538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr1 17657539 . T . PASS END=17657539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 17657540 . C . PASS END=17657550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1194:0,93,255:31,0 chr1 17657551 . G . PASS END=17657552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1048:0,76,255:30,0 chr1 17657553 . A . PASS END=17657583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1102:0,80,255:32,0 chr1 17657584 . C . PASS END=17657599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:26,0 chr1 17657600 . A . PASS END=17657600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 17657601 . C . PASS END=17657608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,894:0,62,255:25,0 chr1 17657609 . A . PASS END=17657609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 17657610 . T . PASS END=17657611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 17657612 . A . PASS END=17657612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 17657613 . A . PASS END=17657615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17657616 . T C, 122.24 PASS DP=25;MQ=249.76;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,19,0:0,6,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,16:0,0,9,16 chr1 17657617 . G . PASS END=17657620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 17657621 . A . PASS END=17657643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 17657644 . G . PASS END=17657644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 17660438 . G . PASS END=17660461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1621:0,119,255:40,0 chr1 17660462 . A . PASS END=17660498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,99,1485:0,117,255:40,0 chr1 17660499 . G C, 160.44 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,18,0:0,20,0:110:198,113,0,1396,113,1396:255,114,0:0,0:1.6044e+02,1.1044e+02,0.0000e+00,4.5000e+02,1.4521e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,25:0,0,17,21 chr1 17660500 . G . PASS END=17660504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 17662639 . T C, 178.97 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,27,0:0,17,0:129:217,132,0,1669,132,1669:255,132,0:0,0:1.7897e+02,1.2897e+02,0.0000e+00,4.5000e+02,1.6374e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,17:0,0,24,20 chr1 17662654 . A . PASS END=17662661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 17662662 . T C, 182.43 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,26,0:0,19,0:132:220,135,0,1737,135,1737:255,135,0:0,0:1.8243e+02,1.3243e+02,0.0000e+00,4.5000e+02,1.6720e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,21:0,0,23,22 chr1 17662663 . T . PASS END=17662699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,129,255:40,0 chr1 17662700 . A . PASS END=17662700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 17662701 . A . PASS END=17662701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,142,255:40,0 chr1 17662702 . C . PASS END=17662711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,125,255:40,0 chr1 17662712 . G . PASS END=17662712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 17662713 . A . PASS END=17662713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 17662714 . A . PASS END=17662721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:47:0,120,1800:0,128,255:40,0 chr1 17664533 . A . PASS END=17664632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:32:0,83,1350:0,83,255:40,0 chr1 17664633 . A . PASS END=17664637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:35:0,78,1170:0,97,255:26,0 chr1 17664638 . C . PASS END=17664646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1070:0,87,255:29,0 chr1 17664647 . G . PASS END=17664650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,70,255:26,0 chr1 17666183 . A . PASS END=17666308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:37:0,84,1260:0,111,255:40,0 chr1 17668438 . G . PASS END=17668616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:27:0,80,778:0,80,255:40,0 chr1 17668794 . G . PASS END=17668794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:25,0 chr1 17668795 . A . PASS END=17668838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1024:0,81,255:32,0 chr1 17668839 . G . PASS END=17668881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,831:0,66,255:26,0 chr1 17668882 . A . PASS END=17668897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:40:19:0,40,629:0,40,255:19,0 chr1 17672523 . T . PASS END=17672624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:34:0,89,1229:0,89,255:40,0 chr1 17672625 . G . PASS END=17672625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 17672626 . T . PASS END=17672634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:32,0 chr1 17674436 . G . PASS END=17674439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1443:0,104,255:40,0 chr1 17674440 . A . PASS END=17674499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,106,1345:0,106,255:40,0 chr1 17674500 . C . PASS END=17674536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:37:0,96,1405:0,104,255:40,0 chr1 17674537 . C A, 157.44 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,12,0:0,25,0:107:195,110,0,1368,110,1368:255,111,0:0,0:1.5744e+02,1.0744e+02,0.0000e+00,4.5000e+02,1.4221e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,29:0,0,23,14 chr1 17674538 . G . PASS END=17674543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:33,0 chr1 17675195 . A . PASS END=17675233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1125:0,82,255:35,0 chr1 17675328 . G . PASS END=17675342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,825:0,66,255:23,0 chr1 17675343 . G . PASS END=17675351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 17681028 . G . PASS END=17681031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17681032 . C . PASS END=17681032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr1 17681033 . A . PASS END=17681034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 17681035 . A . PASS END=17681035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 17681036 . T . PASS END=17681037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17681038 . T . PASS END=17681038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 17681039 . T . PASS END=17681040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17681041 . G . PASS END=17681041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 17681042 . C . PASS END=17681042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17681043 . T . PASS END=17681043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 17681044 . A . PASS END=17681130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1094:0,86,255:37,0 chr1 17681131 . G . PASS END=17681151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 17681152 . G . PASS END=17681161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,747:0,50,255:19,0 chr1 17681162 . C . PASS END=17681168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17681169 . A . PASS END=17681182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 17682478 . C . PASS END=17682480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 17682481 . T . PASS END=17682495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,870:0,61,255:25,0 chr1 17682496 . G . PASS END=17682496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:25,0 chr1 17682497 . C . PASS END=17682497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 17682498 . A . PASS END=17682498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:27,2 chr1 17682499 . C . PASS END=17682499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,978:0,21,255:26,2 chr1 17682500 . C . PASS END=17682500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:27,0 chr1 17682501 . A . PASS END=17682502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 17682503 . G . PASS END=17682503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 17682504 . C . PASS END=17682514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:32,0 chr1 17682515 . T . PASS END=17682516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1070:0,63,255:30,0 chr1 17682517 . C . PASS END=17682517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 17682518 . C . PASS END=17682518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:29,0 chr1 17682519 . T . PASS END=17682548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1133:0,80,255:35,0 chr1 17682549 . A . PASS END=17682549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 17682550 . G . PASS END=17682554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1665:0,117,255:38,0 chr1 17682555 . A . PASS END=17682555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:37,0 chr1 17682556 . T . PASS END=17682579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1296:0,92,255:36,0 chr1 17682580 . C . PASS END=17682580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr1 17682581 . G . PASS END=17682599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1249:0,89,255:33,0 chr1 17682600 . T . PASS END=17682601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,1047:0,51,255:28,0 chr1 17682602 . G . PASS END=17682603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17682604 . G . PASS END=17682617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:26:0,71,1069:0,71,255:26,0 chr1 17682618 . G . PASS END=17682618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 17682619 . G . PASS END=17682620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:24,0 chr1 17682621 . A . PASS END=17682622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,65,255:19,0 chr1 17682852 . G . PASS END=17682852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 17682853 . G . PASS END=17682861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 17682862 . T . PASS END=17682862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr1 17682863 . G . PASS END=17682865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 17682866 . C . PASS END=17682866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 17682867 . C . PASS END=17682871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 17682872 . C . PASS END=17682873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 17682874 . G . PASS END=17682889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 17682890 . C . PASS END=17682890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 17682891 . A . PASS END=17682898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,462:0,45,255:15,0 chr1 17682899 . C . PASS END=17682899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 17682900 . C . PASS END=17682903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,531:0,45,255:16,0 chr1 17682904 . A . PASS END=17682904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 17682905 . G . PASS END=17682905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 17682906 . C . PASS END=17682906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 17682907 . A . PASS END=17682916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 17682917 . G . PASS END=17682917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 17682918 . G . PASS END=17682921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 17682922 . A . PASS END=17682922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 17682923 . C . PASS END=17682926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 17682927 . G . PASS END=17682933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:38:16:0,38,585:0,38,255:13,0 chr1 17682934 . T . PASS END=17682934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 17682935 . G . PASS END=17682954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,480:0,39,255:13,0 chr1 17685333 . A . PASS END=17685403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:97:44:0,97,1530:0,97,255:40,0 chr1 17685775 . A . PASS END=17685775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,645:0,33,255:20,0 chr1 17685776 . G . PASS END=17685776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,671:0,16,255:19,0 chr1 17685777 . A . PASS END=17685778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 17685779 . G . PASS END=17685779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,577:0,32,255:20,0 chr1 17685780 . C . PASS END=17685781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,709:0,66,255:22,0 chr1 17685782 . T . PASS END=17685782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 17685783 . C . PASS END=17685783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr1 17685784 . G . PASS END=17685784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 17685785 . A . PASS END=17685785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 17685786 . C . PASS END=17685786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 17685787 . T . LowGQ END=17685787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,552:6,0,255:19,0 chr1 17685788 . G . PASS END=17685788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,578:0,32,255:20,0 chr1 17685789 . G . PASS END=17685789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17685790 . A . PASS END=17685792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 17685793 . C . PASS END=17685793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 17685794 . G . PASS END=17685794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,755:0,38,255:21,0 chr1 17685795 . C . PASS END=17685795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 17685796 . G . PASS END=17685796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 17685797 . A . PASS END=17685797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 17685798 . G . PASS END=17685798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:20,0 chr1 17685799 . C . PASS END=17685799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 17685800 . T . PASS END=17685800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 17685801 . G . PASS END=17685806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,841:0,61,255:25,0 chr1 17685807 . G . PASS END=17685807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 17685808 . C . PASS END=17685810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 17685811 . G . PASS END=17685811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 17685812 . A . PASS END=17685812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 17685813 . G . PASS END=17685814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,822:0,20,255:23,0 chr1 17685815 . T . PASS END=17685815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 17685816 . G . PASS END=17685820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 17685821 . T . PASS END=17685821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 17685822 . G . PASS END=17685823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 17685824 . C . PASS END=17685824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 17685825 . C . PASS END=17685825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 17685826 . G . PASS END=17685826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 17685827 . A . PASS END=17685827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17685828 . G . PASS END=17685828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 17685829 . A . PASS END=17685829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,958:0,56,255:27,0 chr1 17685830 . G . PASS END=17685830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 17685831 . T . PASS END=17685831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:25,0 chr1 17685832 . G . PASS END=17685839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1015:0,71,255:25,0 chr1 17685840 . T . PASS END=17685840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:24,0 chr1 17685841 . G . PASS END=17685848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,953:0,62,255:25,0 chr1 17685849 . G . PASS END=17685849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 17685850 . C . PASS END=17685850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:21,0 chr1 17685851 . A . PASS END=17685851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 17685852 . G . PASS END=17685853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 17685854 . T . PASS END=17685854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 17685855 . C . PASS END=17685855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 17685856 . T . PASS END=17685856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 17685857 . T . PASS END=17685860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 17685861 . G . PASS END=17685861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 17685862 . C . PASS END=17685862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 17685863 . T . PASS END=17685863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 17685864 . C . PASS END=17685865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 17685866 . A . PASS END=17685900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,543:0,45,255:19,0 chr1 17685901 . A . PASS END=17685903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 17690017 . G . PASS END=17690129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr1 17690130 . C . PASS END=17690154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,304:0,27,255:9,0 chr1 17690155 . T . PASS END=17690171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 17690172 . C . PASS END=17690172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 17690173 . A . PASS END=17690174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 17690175 . G . PASS END=17690177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 17690178 . T . PASS END=17690199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,396:0,33,255:13,0 chr1 17690200 . A . PASS END=17690200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 17690201 . A . PASS END=17690201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 17690202 . C . PASS END=17690250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 17698741 . A . PASS END=17698762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,114,1413:0,114,255:40,0 chr1 17698763 . C . PASS END=17698853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:43:0,96,1315:0,96,255:40,0 chr1 17698854 . C . PASS END=17698856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:38,0 chr1 17699551 . G . PASS END=17699552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,880:0,75,255:25,0 chr1 17699553 . G . PASS END=17699566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,909:0,65,255:26,0 chr1 17699567 . T . PASS END=17699572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:30,0 chr1 17699573 . T . PASS END=17699573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr1 17699574 . G . PASS END=17699690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1103:0,84,255:40,0 chr1 17699691 . A . PASS END=17699691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1172:0,71,255:30,0 chr1 17699692 . G . PASS END=17699706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1082:0,82,255:30,0 chr1 17699707 . C . PASS END=17699707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 17699708 . C . PASS END=17699709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17699710 . T . PASS END=17699717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1031:0,74,255:26,0 chr1 17699718 . A . PASS END=17699719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 17699720 . G . PASS END=17699724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 17699725 . T . PASS END=17699728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,855:0,71,255:19,0 chr1 17701922 . G . PASS END=17701922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 17701923 . T . PASS END=17701923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:25,0 chr1 17701924 . C . PASS END=17701942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1024:0,81,255:30,0 chr1 17701943 . C . PASS END=17701943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 17701944 . C . PASS END=17701960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1074:0,90,255:30,0 chr1 17701961 . G . PASS END=17701962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 17701963 . G . PASS END=17701967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 17701968 . C . PASS END=17701982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:26,0 chr1 17701983 . T . PASS END=17701983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:18,0 chr1 17701984 . C . PASS END=17701994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 17706415 . A . PASS END=17706482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1017:0,84,255:40,0 chr1 17707542 . A . PASS END=17707563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1247:0,86,255:36,0 chr1 17707564 . G . PASS END=17707600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,108,1520:0,111,255:40,0 chr1 17707601 . T C, 48.48 PASS DP=43;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=4.173;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,18,0:0.419,0.000:43:14,10,0:11,8,0:46:83,0,47,183,183,183:255,0,255:22,0:4.8477e+01,1.0510e-04,5.0000e+01,1.8325e+02,2.1802e+02,1.8626e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,15,6,12:11,14,10,8 chr1 17707602 . G . PASS END=17707638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1252:0,108,255:39,0 chr1 17707639 . A . PASS END=17707659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:36,0 chr1 17708462 . A . PASS END=17708462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 17708463 . A . PASS END=17708488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:31:0,92,1073:0,92,255:36,0 chr1 17708489 . T . PASS END=17708489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1294:0,59,255:35,0 chr1 17708490 . G . PASS END=17708543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:34:0,82,1247:0,82,255:40,0 chr1 17708544 . C . PASS END=17708544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 17708545 . T . PASS END=17708548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17708549 . A . PASS END=17708549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,910:0,48,255:27,0 chr1 17708550 . G . PASS END=17708552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17708553 . A . PASS END=17708553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 17708554 . G . PASS END=17708556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17708557 . T . PASS END=17708557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 17708558 . C . PASS END=17708568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 17708569 . A . PASS END=17708585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:25,0 chr1 17708586 . A . PASS END=17708586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 17708587 . A . PASS END=17708587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 17714876 . A . PASS END=17714881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 17714882 . A . PASS END=17714882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 17714883 . C . PASS END=17714889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 17714890 . A . PASS END=17714891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,490:0,31,255:15,0 chr1 17714892 . C . PASS END=17714899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 17714900 . T . PASS END=17714900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 17714901 . G . PASS END=17714901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 17714902 . G . PASS END=17714908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,629:0,54,255:18,0 chr1 17714909 . G . PASS END=17714918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:23,0 chr1 17714919 . G . PASS END=17714919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 17714920 . C . PASS END=17714923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 17714924 . C . PASS END=17714928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:30,0 chr1 17714929 . A . PASS END=17714929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:30,0 chr1 17714930 . C . PASS END=17714937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1030:0,96,255:33,0 chr1 17714938 . C . PASS END=17714938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr1 17714939 . T . PASS END=17714952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1164:0,83,255:31,0 chr1 17714953 . T . PASS END=17714953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:28,0 chr1 17714954 . T . PASS END=17714965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:32,0 chr1 17714966 . T . PASS END=17714966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 17714967 . C . PASS END=17714980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1200:0,83,255:33,0 chr1 17714981 . T . PASS END=17714981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 17714982 . A . PASS END=17715037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1141:0,82,255:36,0 chr1 17715038 . A . PASS END=17715038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:30,0 chr1 17715039 . G . PASS END=17715043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 17715044 . C . PASS END=17715047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17715048 . A . PASS END=17715054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr1 17715272 . T . PASS END=17715276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:26,0 chr1 17715277 . T . PASS END=17715375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1002:0,81,255:40,0 chr1 17718609 . G . PASS END=17718610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 17718611 . A . PASS END=17718611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 17718612 . G . PASS END=17718626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,833:0,61,255:25,0 chr1 17718627 . T . PASS END=17718640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:26:0,42,630:0,65,255:18,0 chr1 17718641 . T . PASS END=17718643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:33:28:0,33,495:0,68,255:12,0 chr1 17718644 . C . PASS END=17718650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:21:27:0,21,315:0,65,255:9,0 chr1 17718651 . G . PASS END=17718657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:15:24:0,15,225:0,72,255:6,0 chr1 17718658 . A . LowGQ END=17718670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:25,0:25:0:23:0,0,0:0,33,255:3,1 chr1 17718671 . AG A, 116.21 PASS DP=23;MQ=247.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:148,69,0,812,69,812:255,69,0:0,34:1.1621e+02,6.6207e+01,1.0354e-06,4.5000e+02,1.0098e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,9,14:0,0,13,10 chr1 17718673 . G . LowGQ END=17718673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,23:23:0:23:0,0,0:255,69,0:21,0 chr1 17718674 . G . PASS END=17718688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 17718689 . G . PASS END=17718694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 17718695 . C . PASS END=17718703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,815:0,63,255:22,0 chr1 17718704 . C . PASS END=17718721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:19,0 chr1 17720471 . G . PASS END=17720476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 17720477 . A . PASS END=17720577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,129,255:40,0 chr1 17720578 . G . PASS END=17720578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:39,0 chr1 17720796 . A . PASS END=17720944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,89,255:40,0 chr1 17720945 . C . PASS END=17720950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:30:0,75,1125:0,90,255:26,0 chr1 17721447 . C . PASS END=17721450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17721451 . G . PASS END=17721550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1202:0,83,255:40,0 chr1 17721551 . T . PASS END=17721551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:34,0 chr1 17721552 . G . PASS END=17721578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1180:0,83,255:36,0 chr1 17721579 . A . PASS END=17721579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 17721580 . G . PASS END=17721583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17721584 . A . PASS END=17721584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17721585 . C . PASS END=17721588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17721589 . A . PASS END=17721589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 17721590 . A . PASS END=17721590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17721591 . T . PASS END=17721600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:26,0 chr1 17721601 . A . PASS END=17721601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:21,0 chr1 17721602 . A . PASS END=17721603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:22,0 chr1 17722036 . G . PASS END=17722041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 17722042 . C . PASS END=17722046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 17722047 . G . PASS END=17722047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 17722048 . C . PASS END=17722057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 17722058 . G . PASS END=17722058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1019:0,51,255:28,0 chr1 17722059 . C . PASS END=17722061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17722062 . C . PASS END=17722062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 17722063 . A . PASS END=17722117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,90,255:37,0 chr1 17722118 . T . PASS END=17722118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 17722119 . T . PASS END=17722120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17722121 . T . PASS END=17722121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:28,0 chr1 17722122 . G . PASS END=17722127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 17722128 . T . PASS END=17722154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr1 17722155 . T . PASS END=17722155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 17722156 . A . PASS END=17722159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 17723567 . G . PASS END=17723569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr1 17723570 . G . PASS END=17723622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:27:0,80,1005:0,80,255:31,0 chr1 17723623 . A . PASS END=17723623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 17723624 . A . PASS END=17723627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 17723628 . A . PASS END=17723637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 17725182 . A . LowGQ END=17725186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:3,0,255:11,0 chr1 17725187 . C . PASS END=17725187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 17725188 . A . LowGQ END=17725192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:0,0,255:15,0 chr1 17725193 . C . PASS END=17725194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 17725195 . T . PASS END=17725195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:16,0 chr1 17725196 . G . PASS END=17725196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:16,0 chr1 17725197 . A . PASS END=17725197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 17725198 . A . PASS END=17725198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 17725199 . C . PASS END=17725200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 17725201 . G . PASS END=17725201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,686:0,27,255:21,0 chr1 17725202 . T . PASS END=17725202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 17725203 . G . PASS END=17725204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 17725205 . C . PASS END=17725205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 17725206 . A . PASS END=17725211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,914:0,72,255:25,0 chr1 17725212 . A . PASS END=17725217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,933:0,75,255:26,0 chr1 17725218 . G . PASS END=17725307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1202:0,96,255:40,0 chr1 17725308 . A . PASS END=17725320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 17725321 . C . PASS END=17725340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 17725341 . C . PASS END=17725343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 17727701 . T . PASS END=17727701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 17727702 . T . PASS END=17727709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1057:0,87,255:31,0 chr1 17727710 . A . PASS END=17727710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:30,0 chr1 17727711 . T . PASS END=17727934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:31:0,82,1169:0,82,255:40,0 chr1 17735586 . T . PASS END=17735592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1158:0,85,255:35,0 chr1 17735593 . G . PASS END=17735593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:36,0 chr1 17735594 . T . PASS END=17735672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:36:0,90,1206:0,92,255:40,0 chr1 17735673 . T . PASS END=17735673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:28,0 chr1 17735674 . G . PASS END=17735682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1294:0,89,255:30,0 chr1 17735683 . A . PASS END=17735683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 17735684 . T . PASS END=17735690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 17736470 . C . PASS END=17736536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:33,0 chr1 17736537 . T . PASS END=17736538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 17736539 . C . PASS END=17736540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 17736541 . C . PASS END=17736547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 17738618 . C . PASS END=17738620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:34,0 chr1 17738621 . T . PASS END=17738621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:33,0 chr1 17738622 . T . PASS END=17738690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:34:0,86,1244:0,86,255:39,0 chr1 17739569 . C . PASS END=17739585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,109,1452:0,109,255:40,0 chr1 17739586 . G A, 32.03 PASS DP=47;MQ=236.72;MQRankSum=1.986;ReadPosRankSum=3.960;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,13,0:0.277,0.000:47:17,7,0:17,6,0:32:67,0,50,457,1212,1669:255,0,255:31,0:3.2028e+01,2.7456e-03,5.3003e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,13,8,5:18,16,8,5 chr1 17739587 . A . PASS END=17739623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,125,255:40,0 chr1 17739624 . A . PASS END=17739674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:43:0,84,1260:0,112,255:40,0 chr1 17740033 . C . PASS END=17740042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,659:0,51,255:19,0 chr1 17740043 . G . PASS END=17740095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,730:0,63,255:26,0 chr1 17740096 . G . PASS END=17740096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 17740097 . G . PASS END=17740098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:25,0 chr1 17740099 . A . PASS END=17740099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:23,0 chr1 17740100 . G . PASS END=17740103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 17740104 . A . PASS END=17740104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 17740105 . A . PASS END=17740115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,74,255:23,0 chr1 17740116 . A . PASS END=17740133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,58,255:19,0 chr1 17740134 . T . PASS END=17740141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 17740142 . C . PASS END=17740142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:21,0 chr1 17740143 . T . PASS END=17740144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 17740145 . T . PASS END=17740145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 17740146 . G . PASS END=17740148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 17740149 . T . PASS END=17740164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 17740165 . A . PASS END=17740165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 17740166 . G . PASS END=17740168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17740169 . A . PASS END=17740199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 17740200 . G . PASS END=17740213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 17742976 . C . PASS END=17743012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 17743013 . A . PASS END=17743013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 17743014 . C . PASS END=17743052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 17743053 . C . PASS END=17743056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 17743057 . G . PASS END=17743057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 17743058 . A . PASS END=17743077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 17743078 . A . PASS END=17743096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 17743097 . T . PASS END=17743133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 17743134 . A . PASS END=17743140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:6,0 chr1 17743141 . T . PASS END=17743142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:6:7:0,6,90:0,21,255:2,0 chr1 17747210 . C . PASS END=17747324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:88:35:0,88,1195:0,88,255:40,1 chr1 17748699 . C . PASS END=17748700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 17748701 . G . PASS END=17748707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:16,0 chr1 17748708 . G . PASS END=17748710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17748711 . G . PASS END=17748711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 17748712 . G . PASS END=17748730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,803:0,63,255:25,0 chr1 17748731 . T . PASS END=17748731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 17748732 . G . PASS END=17748735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr1 17748736 . A . PASS END=17748736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 17748737 . G . PASS END=17748761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,861:0,69,255:24,0 chr1 17748762 . C . PASS END=17748762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 17748763 . C . PASS END=17748765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 17748766 . A . PASS END=17748787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,698:0,54,255:18,0 chr1 17749201 . C . PASS END=17749210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1119:0,83,255:33,0 chr1 17749211 . C . PASS END=17749211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:32,0 chr1 17749212 . A . PASS END=17749313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1168:0,83,255:40,0 chr1 17749314 . T . PASS END=17749323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr1 17749324 . C . PASS END=17749331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 17749332 . C . PASS END=17749332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17752037 . C . PASS END=17752037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 17752038 . C . PASS END=17752043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,939:0,62,255:26,0 chr1 17752044 . C . PASS END=17752049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 17752050 . C . PASS END=17752050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 17752051 . T . PASS END=17752055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 17752056 . T . PASS END=17752056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 17752057 . T . PASS END=17752058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 17752059 . C . PASS END=17752059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 17752060 . G . PASS END=17752060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 17752061 . T . PASS END=17752061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 17752062 . G . PASS END=17752065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 17752066 . A . PASS END=17752066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 17752067 . T . PASS END=17752069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 17752070 . G . PASS END=17752074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 17752075 . C . PASS END=17752079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17752080 . T . PASS END=17752080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 17752081 . G . PASS END=17752088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17752089 . C . PASS END=17752099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1008:0,68,255:26,0 chr1 17752100 . C . PASS END=17752101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 17752102 . A . PASS END=17752118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:25,0 chr1 17752119 . C . PASS END=17752119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 17752120 . C . PASS END=17752129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 17752130 . A . PASS END=17752145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:18:0,44,675:0,44,255:18,0 chr1 17752146 . C . PASS END=17752152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 17752153 . A . PASS END=17752154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 17752155 . A . PASS END=17752155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,468:0,34,255:14,0 chr1 17752156 . T . PASS END=17752156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 17752157 . T . PASS END=17752157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:14,0 chr1 17752158 . C . PASS END=17752162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 17752163 . C . PASS END=17752174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 17752175 . A . PASS END=17752175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 17752176 . A . PASS END=17752176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:8,0 chr1 17752177 . G . PASS END=17752180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 17755602 . C . PASS END=17755695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,120,1800:0,123,255:40,0 chr1 17764726 . G . PASS END=17764753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,472:0,39,255:13,0 chr1 17764754 . G . PASS END=17764770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 17764771 . G . PASS END=17764785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 17764786 . T . PASS END=17764804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,310:0,24,255:8,0 chr1 17764805 . G . PASS END=17764833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr1 17764834 . G . PASS END=17764949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:3,0 chr1 17764950 . C . PASS END=17764951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 17764952 . G . PASS END=17764962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 17764963 . C . PASS END=17764986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 17764987 . C T, 33.71 PASS DP=3;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,2,0:0.667,0.000:3:1,1,0:0,1,0:30:68,0,30,71,36,107:69,0,30:1,0:3.3705e+01,4.2326e-03,3.2613e+01,7.1485e+01,7.0402e+01,1.1011e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,2,0:0,1,1,1 chr1 17764988 . G . PASS END=17765010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 17907091 . A . PASS END=17907127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,206,255:40,0 chr1 17913955 . G . PASS END=17913957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 17913958 . A . PASS END=17913958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,396:0,8,255:12,0 chr1 17913959 . T . PASS END=17913960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 17913961 . A . PASS END=17913975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:18,0 chr1 17913976 . T . PASS END=17913979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 17913980 . A . PASS END=17913980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 17913981 . G . PASS END=17913988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,747:0,60,255:22,0 chr1 17913989 . C . PASS END=17913989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 17913990 . T . PASS END=17914019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,848:0,64,255:26,0 chr1 17914020 . T . PASS END=17914020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,750:0,39,255:24,0 chr1 17914021 . T . PASS END=17914032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,890:0,62,255:26,0 chr1 17914033 . A . PASS END=17914033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:25,0 chr1 17914034 . C . PASS END=17914047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:29,0 chr1 17914048 . A . PASS END=17914048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 17914049 . G . PASS END=17914084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1103:0,80,255:33,0 chr1 17914085 . T . PASS END=17914101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1172:0,83,255:32,0 chr1 17914102 . A . PASS END=17914111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1009:0,73,255:27,0 chr1 17914112 . G . PASS END=17914112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 17914113 . A . PASS END=17914116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 17914117 . A . PASS END=17914117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 17914118 . C . PASS END=17914121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:24,0 chr1 17914122 . G A, 47.13 PASS DP=26;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=1.502;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,10,0:0.385,0.000:26:5,3,0:11,7,0:46:82,0,50,356,543,900:255,0,255:13,0:4.7130e+01,1.0587e-04,5.3000e+01,3.5635e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,11,4,6:12,4,5,5 chr1 17914123 . A . PASS END=17914140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 17914941 . A . PASS END=17914946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 17914947 . A . PASS END=17914956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:22,0 chr1 17914957 . T . PASS END=17914972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,50,255:19,0 chr1 17914973 . G . PASS END=17914973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17914974 . G . PASS END=17914974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,697:0,47,255:19,0 chr1 17928622 . G . PASS END=17928664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:30,0 chr1 17928665 . T . PASS END=17928665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr1 17928666 . T . PASS END=17928677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:30,0 chr1 17928678 . G . PASS END=17928678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 17928679 . G . PASS END=17928689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:30,0 chr1 17928690 . G . PASS END=17928690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 17928691 . G . PASS END=17928691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17928692 . A . PASS END=17928692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 17928693 . A . PASS END=17928698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 17928699 . A . PASS END=17928702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1019:0,73,255:28,0 chr1 17928703 . T . PASS END=17928713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 17930003 . T . PASS END=17930018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1057:0,87,255:29,0 chr1 17930019 . C . PASS END=17930019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 17930020 . C . PASS END=17930029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr1 17930030 . A . PASS END=17930052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1054:0,87,255:29,0 chr1 17930053 . G . PASS END=17930059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1108:0,74,255:26,0 chr1 17930060 . G . PASS END=17930060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17930061 . C . PASS END=17930086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,878:0,62,255:26,0 chr1 17934294 . C . PASS END=17934308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 17934309 . A . PASS END=17934309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 17934310 . C . PASS END=17934310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17934311 . C . PASS END=17934313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17934314 . C . PASS END=17934314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17934315 . T . PASS END=17934315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 17934316 . C . PASS END=17934318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17934319 . C T, 48.86 PASS DP=28;MQ=249.55;MQRankSum=4.433;ReadPosRankSum=3.876;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:12,5,0:4,7,0:47:84,0,50,421,543,965:255,0,255:15,0:4.8862e+01,7.8176e-05,5.3000e+01,4.2113e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,11,7,5:7,9,8,4 chr1 17934320 . G . PASS END=17934320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17934321 . A . PASS END=17934321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17934322 . G . PASS END=17934330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 17934331 . C . PASS END=17934333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 17934334 . G . PASS END=17934356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:29,0 chr1 17934357 . A . PASS END=17934358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17934359 . G . PASS END=17934375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:28,0 chr1 17934376 . C . PASS END=17934402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,824:0,64,255:26,0 chr1 17934403 . C . PASS END=17934406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 17934407 . G . PASS END=17934412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:20,0 chr1 17934413 . G . PASS END=17934430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,665:0,41,255:18,0 chr1 17934431 . G . PASS END=17934431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 17934432 . A . PASS END=17934442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 17934443 . G . PASS END=17934443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 17934444 . C . PASS END=17934444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 17934445 . C . PASS END=17934445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 17934446 . A . PASS END=17934459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 17934460 . C . PASS END=17934460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 17934461 . T . PASS END=17934461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 17934462 . T . PASS END=17934462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 17934463 . C . PASS END=17934468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17934469 . C . PASS END=17934469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 17934470 . A . PASS END=17934470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 17934471 . A . PASS END=17934471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,425:0,12,255:10,0 chr1 17934472 . G . PASS END=17934472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 17939553 . C . PASS END=17939669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,111,1473:0,114,255:40,0 chr1 17942589 . A . PASS END=17942596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:30,0 chr1 17942597 . G . PASS END=17942597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 17942598 . C . PASS END=17942628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1050:0,90,255:38,0 chr1 17942629 . A . PASS END=17942629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 17942630 . T . PASS END=17942673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:91:36:0,91,1117:0,91,255:38,0 chr1 17942674 . T . PASS END=17942674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1109:0,58,255:30,0 chr1 17942675 . C . PASS END=17942677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1318:0,92,255:33,0 chr1 17942678 . G . PASS END=17942678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:31,0 chr1 17942679 . C . PASS END=17942693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1089:0,82,255:32,0 chr1 17942694 . C . PASS END=17942697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:32:0,68,1125:0,68,255:29,0 chr1 17944849 . A . PASS END=17944854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 17944855 . C . PASS END=17944855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 17944856 . C . PASS END=17944858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 17944859 . G . PASS END=17944859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 17944860 . C . PASS END=17944861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 17944862 . G . PASS END=17944862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 17944863 . C . PASS END=17944866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 17944867 . T . PASS END=17944867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 17944868 . G . PASS END=17944871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 17944872 . G . PASS END=17944873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17944874 . A . PASS END=17944874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 17944875 . G . PASS END=17944902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:19,0 chr1 17944903 . G . PASS END=17944911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 17944912 . G . PASS END=17944912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 17944913 . A . PASS END=17944919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 17944920 . G . PASS END=17944926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 17944927 . A . PASS END=17944929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 17944930 . T . PASS END=17944930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 17944931 . G . PASS END=17944931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 17944932 . G . PASS END=17944943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 17944944 . G . PASS END=17944944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 17944945 . G . PASS END=17944946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 17944947 . T . PASS END=17944960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,673:0,41,255:19,0 chr1 17944961 . A . PASS END=17944961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,513:0,24,255:16,0 chr1 17944962 . C . PASS END=17944968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:18,0 chr1 17944969 . G . LowGQ END=17944969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,418:24,0,255:14,0 chr1 17944970 . C . PASS END=17944971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 17944972 . G . PASS END=17944972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,482:0,21,255:15,0 chr1 17944973 . T . PASS END=17944973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,523:0,37,255:16,0 chr1 17944974 . C . PASS END=17944975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 17944976 . T . PASS END=17944976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:14,0 chr1 17944977 . C . PASS END=17944977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,421:0,4,255:13,0 chr1 17944978 . C . PASS END=17944978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 17944979 . G . LowGQ END=17944979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,343:35,0,255:11,0 chr1 17944980 . C . PASS END=17944980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 17944981 . T . PASS END=17944981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:1:19:0,1,499:0,1,255:15,0 chr1 17944982 . G . PASS END=17944983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 17944984 . C . PASS END=17944985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:21:18:0,21,468:0,21,255:14,0 chr1 17944986 . C . PASS END=17944986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 17944987 . T . PASS END=17944987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:17:17:0,17,415:0,17,255:13,0 chr1 17944988 . C . LowGQ END=17944988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,388:16,0,255:12,0 chr1 17944989 . C . PASS END=17944989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr1 17944990 . T . PASS END=17944990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,423:0,9,255:14,0 chr1 17944991 . C . PASS END=17944991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:14,0 chr1 17944992 . C . PASS END=17944992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 17944993 . T . LowGQ END=17944993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,402:2,0,255:12,0 chr1 17944994 . C . PASS END=17944994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,405:0,15,255:13,0 chr1 17944995 . C . PASS END=17944995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 17944996 . T . LowGQ END=17944996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,282:5,0,255:12,0 chr1 17944997 . C . PASS END=17944997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr1 17944998 . C . PASS END=17944998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 17944999 . T . LowGQ END=17944999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,279:36,0,255:11,0 chr1 17945000 . C . PASS END=17945000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:14,0 chr1 17945001 . C . PASS END=17945001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 17945002 . T . LowGQ END=17945002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,5:15:0:15:0,0,246:52,0,255:10,0 chr1 17945003 . C . PASS END=17945003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 17945004 . T . LowGQ END=17945004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,335:19,0,255:12,0 chr1 17945005 . G . PASS END=17945005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,388:0,12,255:13,0 chr1 17945006 . T . PASS END=17945006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 17945007 . C . LowGQ END=17945007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,360:3,0,255:13,0 chr1 17945008 . T . PASS END=17945009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr1 17945010 . C . PASS END=17945010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 17945011 . T . PASS END=17945011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:11:15:0,11,352:0,11,255:13,0 chr1 17945012 . G . PASS END=17945012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:14,0 chr1 17945013 . C . PASS END=17945014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 17945015 . C . PASS END=17945015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:13,0 chr1 17945016 . A . PASS END=17945016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 17945017 . G . PASS END=17945017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,366:0,12,255:13,0 chr1 17945825 . A . PASS END=17945914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:82:41:0,82,1485:0,82,255:40,0 chr1 17945915 . T . PASS END=17945915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1315:0,75,255:29,0 chr1 17945916 . G . PASS END=17945926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,92,255:31,0 chr1 17945927 . T . PASS END=17945927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:19:35:0,19,1072:0,19,255:26,0 chr1 17945928 . G . PASS END=17945937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:33:0,63,997:0,63,255:26,0 chr1 17945938 . C . PASS END=17945938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,964:0,49,255:21,0 chr1 17945939 . A . LowGQ END=17945939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,5:30:0:30:0,0,766:15,0,255:19,0 chr1 17945940 . G . PASS END=17945940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 17948359 . G . PASS END=17948370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:92:32:0,92,1164:0,92,255:35,0 chr1 17948371 . C . PASS END=17948371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:35,0 chr1 17948372 . A . PASS END=17948390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1321:0,87,255:39,0 chr1 17948391 . G . PASS END=17948391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1425:0,68,255:38,0 chr1 17948392 . C . PASS END=17948436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1173:0,84,255:39,0 chr1 17949491 . G . PASS END=17949643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:30:0,90,1133:0,90,255:40,0 chr1 17949644 . A . PASS END=17949644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1137:0,69,255:28,0 chr1 17949645 . A . PASS END=17949653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 17949654 . A . PASS END=17949654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 17949655 . C . PASS END=17949656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 17949657 . T . PASS END=17949657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17949658 . C . PASS END=17949658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17949659 . T . PASS END=17949659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17949660 . T . PASS END=17949662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17949663 . T . PASS END=17949670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:26,0 chr1 17950882 . T . PASS END=17950998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:38:0,84,1347:0,84,255:40,0 chr1 17952451 . C . PASS END=17952468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 17952469 . C . PASS END=17952473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 17952474 . C . PASS END=17952478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 17952479 . T . PASS END=17952479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 17952480 . C . PASS END=17952520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1088:0,90,255:32,0 chr1 17952521 . C . PASS END=17952521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 17952522 . A . PASS END=17952522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:26,0 chr1 17952523 . C . PASS END=17952523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:26,0 chr1 17952524 . A . PASS END=17952543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,976:0,65,255:26,0 chr1 17953825 . G . PASS END=17953835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 17953836 . G . PASS END=17953840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 17953841 . C . PASS END=17953851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 17953852 . C . PASS END=17953900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:25,0 chr1 17953901 . T . PASS END=17953901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 17953902 . G . PASS END=17953908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 17953909 . A . PASS END=17953909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,777:0,44,255:23,0 chr1 17953910 . A . PASS END=17953920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 17953921 . C . PASS END=17953921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 17953922 . A . PASS END=17953965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,853:0,69,255:26,0 chr1 17953966 . A . PASS END=17953966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:19,0 chr1 17953967 . A . PASS END=17953980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,886:0,64,255:22,0 chr1 17953981 . C . PASS END=17953998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:19,0 chr1 17958816 . C . PASS END=17958818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:29,0 chr1 17958819 . T . PASS END=17958819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:27,0 chr1 17958820 . T . PASS END=17958832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 17958833 . G . PASS END=17958833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr1 17958834 . C . PASS END=17958834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 17958835 . G . PASS END=17958835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 17958836 . G . PASS END=17958961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:31:0,89,1288:0,89,255:40,0 chr1 17961043 . G . PASS END=17961055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 17961056 . A . PASS END=17961057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:18,0 chr1 17961330 . G . PASS END=17961343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:19,0 chr1 17961344 . T . PASS END=17961345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 17961346 . A . PASS END=17961349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17961350 . G . PASS END=17961388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 17961389 . A . PASS END=17961389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 17961390 . C . PASS END=17961392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 17961393 . G . PASS END=17961393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 17961394 . G . PASS END=17961398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 17961399 . G . PASS END=17961401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 17961402 . C . PASS END=17961405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17961406 . G . PASS END=17961408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17961409 . C . PASS END=17961411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 17961412 . G . PASS END=17961422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 17961423 . G . PASS END=17961423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 17961424 . G . PASS END=17961441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1133:0,87,255:31,0 chr1 17961442 . T . PASS END=17961442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 17961443 . A . PASS END=17961445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 17961446 . A . PASS END=17961446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:28,0 chr1 17961447 . C . PASS END=17961454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 17961455 . A . PASS END=17961457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 17961458 . T . PASS END=17961458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:24,0 chr1 17961459 . G . PASS END=17961470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 17961471 . C . PASS END=17961471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17961472 . T . PASS END=17961472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 17961473 . C . PASS END=17961476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 17961477 . C . PASS END=17961507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:26,0 chr1 17961508 . C . PASS END=17961511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 17964383 . A . PASS END=17964495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1202:0,86,255:40,0 chr1 17964496 . C . PASS END=17964498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,79,255:26,0 chr1 17965057 . A . PASS END=17965076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,762:0,66,255:26,0 chr1 17965077 . T . PASS END=17965083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1202:0,87,255:31,0 chr1 17965084 . T . PASS END=17965084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr1 17965085 . G . PASS END=17965161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1202:0,81,255:38,0 chr1 17965162 . C . PASS END=17965184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,68,255:26,0 chr1 17965733 . A . PASS END=17965736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,153,255:40,0 chr1 17966697 . G . PASS END=17966710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,966:0,81,255:29,0 chr1 17966711 . T . PASS END=17966711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:28,0 chr1 17966712 . T . PASS END=17966713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 17966714 . G . PASS END=17966714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 17966715 . C . PASS END=17966721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 17966722 . G . PASS END=17966722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 17966723 . T . PASS END=17966746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1102:0,80,255:31,0 chr1 17966747 . T . PASS END=17966747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 17966748 . G . PASS END=17966754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 17966755 . A . PASS END=17966755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:26,0 chr1 17966756 . T . PASS END=17966756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 17966757 . T . PASS END=17966757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 17966758 . T . PASS END=17966760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 17966761 . T . PASS END=17966790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,861:0,62,255:26,0 chr1 17966791 . G . PASS END=17966791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 17966792 . G . PASS END=17966793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 17966794 . C . PASS END=17966797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 17975049 . G . PASS END=17975069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 17975070 . G . PASS END=17975098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 17975099 . A . PASS END=17975113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 17975114 . T . PASS END=17975121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 17975122 . C . PASS END=17975164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:19,0 chr1 17975165 . C . PASS END=17975170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 17981131 . C . PASS END=17981135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 17981136 . G . PASS END=17981136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 17981137 . G . PASS END=17981139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 17981140 . C . PASS END=17981140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 17981141 . T . PASS END=17981146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1080:0,90,255:32,0 chr1 17981147 . A . PASS END=17981180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:33,0 chr1 17981181 . A . PASS END=17981181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:30,0 chr1 17981182 . G . PASS END=17981183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 17981184 . A C, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=4.229;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,17,0:0.531,0.000:32:11,7,0:4,10,0:48:85,0,50,608,471,1079:255,0,255:14,0:5.0000e+01,6.7304e-05,5.2617e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,9,8:7,8,11,6 chr1 17981185 . G . PASS END=17981211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:30,0 chr1 17981212 . C . PASS END=17981213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 17981214 . C . PASS END=17981217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 17982374 . G . PASS END=17982382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr1 17982383 . G . PASS END=17982443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:19,0 chr1 17982444 . C . PASS END=17982449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 17982450 . A . PASS END=17982450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,629:0,30,255:19,0 chr1 17982451 . G . PASS END=17982465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:22,0 chr1 17982466 . A . PASS END=17982479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,50,255:19,0 chr1 17982480 . G . PASS END=17982484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 17982485 . G . PASS END=17982490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:22:0,52,760:0,52,255:19,0 chr1 17982491 . A . PASS END=17982491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:19,0 chr1 17982492 . T . PASS END=17982494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 17982495 . C . PASS END=17982497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 17982498 . A . PASS END=17982498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,628:0,13,255:17,0 chr1 17982499 . G . PASS END=17982506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 17982507 . A . PASS END=17982507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:17,0 chr1 17982508 . G . PASS END=17982508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 17982509 . G . PASS END=17982509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 17982510 . A . PASS END=17982511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 17982512 . G . PASS END=17982512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 17982513 . C . PASS END=17982521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,765:0,50,255:19,0 chr1 17982522 . G . PASS END=17982524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 17982525 . A . PASS END=17982526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 17982527 . G . PASS END=17982529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,798:0,50,255:19,0 chr1 17982530 . A . PASS END=17982531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17982532 . C . PASS END=17982532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 17982533 . C . PASS END=17982533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 17982534 . C . PASS END=17982537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 17982538 . A . PASS END=17982538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,637:0,30,255:18,0 chr1 17982539 . G . PASS END=17982539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 17982540 . T . PASS END=17982549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,774:0,50,255:19,0 chr1 17982550 . C . PASS END=17982550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:16,0 chr1 17982551 . T . PASS END=17982558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 17982559 . G A, 39.10 PASS DP=17;MQ=248.34;MQRankSum=2.887;ReadPosRankSum=1.642;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,4,0:0.235,0.000:17:7,4,0:6,0,0:39:74,0,50,135,465,600:93,0,255:11,0:3.9100e+01,5.5607e-04,5.3001e+01,1.3507e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,1,3:7,6,1,3 chr1 17982560 . G . PASS END=17982561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 17982562 . G . PASS END=17982568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:15:0,35,585:0,35,255:13,0 chr1 17982569 . A . PASS END=17982569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 17982570 . C . PASS END=17982572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 17982573 . T . PASS END=17982596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 17982597 . G . PASS END=17982597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 17983049 . C . PASS END=17983055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 17983056 . C . PASS END=17983103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 17983104 . A . PASS END=17983104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 17983105 . G . PASS END=17983106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 17983107 . C . PASS END=17983109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 17983110 . G . PASS END=17983110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 17983111 . G . PASS END=17983111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 17983112 . T . PASS END=17983112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 17983113 . C . PASS END=17983113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 17983114 . T . PASS END=17983166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:30:0,86,1233:0,86,255:38,0 chr1 17983167 . C . PASS END=17983167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,2 chr1 17983168 . A . PASS END=17983168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1326:0,45,255:32,2 chr1 17983169 . G . PASS END=17983169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 17983170 . G . PASS END=17983190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:33,0 chr1 17983191 . C . PASS END=17983203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,62,255:26,0 chr1 17990942 . G . PASS END=17990949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:25,0 chr1 17990950 . C . PASS END=17991014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,994:0,81,255:40,0 chr1 17991015 . G . PASS END=17991051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,108,1620:0,114,255:40,0 chr1 17991052 . T C, 161.36 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,18,0:0,20,0:111:199,114,0,1449,114,1449:255,114,0:0,0:1.6136e+02,1.1136e+02,0.0000e+00,4.5000e+02,1.4613e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,19:0,0,21,17 chr1 17991053 . G . PASS END=17991083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,96,255:36,0 chr1 17991084 . G . PASS END=17991084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 17991085 . C . PASS END=17991085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 17991086 . C . PASS END=17991089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:25,0 chr1 17991090 . G . PASS END=17991090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 18014068 . C . PASS END=18014071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 18014072 . G . PASS END=18014072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 18014073 . C . PASS END=18014084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 18014085 . C . PASS END=18014144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:19,0 chr1 18014145 . C . PASS END=18014151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 18014152 . T . PASS END=18014152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr1 18014153 . C . PASS END=18014168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:23,0 chr1 18014169 . C . PASS END=18014169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 18014170 . C . PASS END=18014201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 18014202 . A . PASS END=18014202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 18014203 . G . PASS END=18014203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 18014204 . A . PASS END=18014204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:19,0 chr1 18014205 . G . PASS END=18014232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:17:0,41,630:0,41,255:20,0 chr1 18014233 . C . PASS END=18014234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:13,0 chr1 18014235 . C . PASS END=18014241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 18014242 . G . PASS END=18014242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 18017615 . A . PASS END=18017649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:89:0,120,1800:0,248,255:40,0 chr1 18021653 . G . PASS END=18021688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:22:0,61,808:0,61,255:26,0 chr1 18021689 . G . PASS END=18021696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 18021697 . C . PASS END=18021698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 18021699 . G . PASS END=18021699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 18021700 . C . PASS END=18021700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 18021701 . T . PASS END=18021701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 18021702 . C . PASS END=18021711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:26,0 chr1 18021712 . A . PASS END=18021712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:26,0 chr1 18021713 . C . PASS END=18021713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 18021714 . T . PASS END=18021714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:26,0 chr1 18021715 . G . PASS END=18021726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 18021727 . A . PASS END=18021727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:28,0 chr1 18021728 . T . PASS END=18021728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 18021729 . C . PASS END=18021729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 18021730 . G . PASS END=18021733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 18021734 . T . PASS END=18021734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr1 18021735 . G . PASS END=18021741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 18021742 . G . PASS END=18021742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 18021743 . T . PASS END=18021747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1001:0,84,255:29,0 chr1 18021748 . C . PASS END=18021748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 18021749 . G . PASS END=18021756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 18021757 . G . PASS END=18021775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 18023343 . G . PASS END=18023364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr1 18023365 . C T, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=2.048;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,8,0:0.500,0.000:16:5,4,0:3,4,0:48:85,0,50,257,286,544:245,0,255:7,0:5.0000e+01,6.5233e-05,5.3000e+01,2.5734e+02,3.2095e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,6,2:3,5,6,2 chr1 18023366 . G . PASS END=18023377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:18,0 chr1 18023378 . C . PASS END=18023402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 18023403 . C . PASS END=18023408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 18023409 . T . PASS END=18023409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:20,0 chr1 18023410 . C . PASS END=18023413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 18023414 . G . PASS END=18023414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 18023415 . C . PASS END=18023416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 18023417 . C . PASS END=18023417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:19,0 chr1 18023418 . C . PASS END=18023419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 18023420 . G . PASS END=18023420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 18023421 . A . PASS END=18023421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 18023422 . C . PASS END=18023423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,853:0,56,255:21,0 chr1 18023424 . T . PASS END=18023427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 18023428 . G . PASS END=18023428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 18023429 . C . PASS END=18023432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 18023433 . G . PASS END=18023433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 18023434 . T . PASS END=18023435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 18023436 . A . PASS END=18023436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 18023437 . C . PASS END=18023438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 18023439 . A . PASS END=18023439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 18023440 . G . PASS END=18023471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,922:0,62,255:26,0 chr1 18023472 . A . PASS END=18023480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 18023481 . A . PASS END=18023481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 18023482 . C . PASS END=18023506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,778:0,66,255:24,0 chr1 18023507 . G . PASS END=18023508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:23,0 chr1 18023509 . T C, 49.95 PASS DP=26;MQ=248.76;MQRankSum=3.508;ReadPosRankSum=1.061;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:6,5,0:7,7,0:48:85,0,50,421,436,857:255,0,255:12,0:4.9950e+01,6.5751e-05,5.3000e+01,4.2117e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,6,6:7,6,7,5 chr1 18023510 . A . PASS END=18023513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 18023514 . A . PASS END=18023514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 18023515 . C . PASS END=18023519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 18023520 . G . PASS END=18023520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 18023521 . C . PASS END=18023528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 18023529 . T . PASS END=18023529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 18023530 . G . PASS END=18023546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 18023547 . T . PASS END=18023557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 18023558 . T . PASS END=18023572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:19,0 chr1 18023573 . A . PASS END=18023575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:19:0,39,585:0,57,255:13,0 chr1 18023576 . G . PASS END=18023576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:12,0 chr1 18023577 . C . PASS END=18023578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 18023579 . C . PASS END=18023590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 18023591 . C . PASS END=18023591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 18023592 . C . PASS END=18023595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 18023596 . G . PASS END=18023596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 18023597 . C . PASS END=18023619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:12,0 chr1 18023620 . T . PASS END=18023652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 18023653 . G . PASS END=18023666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 18023667 . A . PASS END=18023683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 18023684 . C . PASS END=18023689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 18023690 . A G, 49.13 PASS DP=10;MQ=250.00;MQRankSum=2.383;ReadPosRankSum=1.133;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,4,0:0.400,0.000:10:3,3,0:3,1,0:48:84,0,50,143,215,358:125,0,203:6,0:4.9126e+01,7.4811e-05,5.3000e+01,1.4306e+02,2.4933e+02,3.6061e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,2,2:3,3,3,1 chr1 18023691 . T . PASS END=18023699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:11,0 chr1 18023700 . G . LowGQ END=18023700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,304:6,0,255:10,0 chr1 18023701 . C . PASS END=18023701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 18023702 . A . PASS END=18023706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 18023707 . G . PASS END=18023710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 18023711 . T . PASS END=18023711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr1 18023712 . G . PASS END=18023717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:12,0 chr1 18023718 . G . PASS END=18023718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 18023719 . C . PASS END=18023724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 18023725 . C . PASS END=18023725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 18023726 . C . PASS END=18023727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 18023728 . C . PASS END=18023734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 18023735 . G . PASS END=18023735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 18023736 . A . PASS END=18023744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr1 18023745 . C . PASS END=18023771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:23,0 chr1 18023772 . G . PASS END=18023772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 18023773 . C . PASS END=18023774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 18023775 . A . PASS END=18023775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 18023776 . C . PASS END=18023777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 18023778 . G . LowGQ END=18023778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,745:5,0,255:21,0 chr1 18023779 . C . PASS END=18023779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 18023780 . A . PASS END=18023782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 18023783 . T . PASS END=18023783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 18023784 . T . PASS END=18023793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,892:0,72,255:24,0 chr1 18023794 . T . PASS END=18023794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 18023795 . C . PASS END=18023823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 18023824 . T . PASS END=18023824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:19,0 chr1 18023825 . G . PASS END=18023834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 18023835 . A . PASS END=18023839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 18023840 . A . PASS END=18023865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 18023866 . G . PASS END=18023873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 18023874 . A . PASS END=18023875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 18149504 . A . PASS END=18149509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 18149510 . G T, 50.00 PASS DP=15;MQ=250.00;MQRankSum=2.807;ReadPosRankSum=1.893;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,11,0:0.733,0.000:15:1,5,0:3,6,0:44:85,0,43,393,143,536:255,0,110:4,0:5.0000e+01,1.6231e-04,4.5623e+01,3.9324e+02,1.7784e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,7,4:0,4,5,6 chr1 18149511 . C . PASS END=18149533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,537:0,43,255:19,0 chr1 18149534 . G . PASS END=18149535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 18149536 . G . PASS END=18149536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 18149537 . T . PASS END=18149551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 18149552 . G . PASS END=18149554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 18149555 . G . PASS END=18149565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 18149566 . C A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.070;ReadPosRankSum=1.435;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,14,0:0.583,0.000:24:4,7,0:6,7,0:48:85,0,49,493,358,850:255,0,255:10,0:5.0000e+01,7.3776e-05,5.1545e+01,4.5000e+02,3.9243e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,7,7:6,4,8,6 chr1 18149567 . T . PASS END=18149585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,939:0,72,255:25,0 chr1 18149586 . T . PASS END=18149586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:21,0 chr1 18149587 . C . PASS END=18149603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 18149604 . A . PASS END=18149629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,884:0,66,255:26,0 chr1 18149630 . G . PASS END=18149631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 18149632 . C . PASS END=18149635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 18149636 . A . PASS END=18149639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18149640 . A . PASS END=18149641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 18149642 . G . PASS END=18149651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 18149652 . G . PASS END=18149652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 18149653 . T . PASS END=18149654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18149655 . T . PASS END=18149659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 18149660 . C . PASS END=18149661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 18149662 . G . PASS END=18149670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 18149671 . C . PASS END=18149681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1185:0,80,255:31,0 chr1 18149682 . C . PASS END=18149682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 18149683 . T . PASS END=18149690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:31,0 chr1 18149691 . T . PASS END=18149691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 18149692 . T . PASS END=18149743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1188:0,86,255:35,0 chr1 18149744 . C . PASS END=18149744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:28,0 chr1 18149745 . T . PASS END=18149786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,92,255:34,0 chr1 18149787 . T . PASS END=18149787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:30,0 chr1 18149788 . C . PASS END=18149799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1255:0,89,255:31,0 chr1 18149800 . C . PASS END=18149801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 18149802 . T . PASS END=18149810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 18149811 . C . PASS END=18149821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr1 18149822 . G . PASS END=18149822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:21,0 chr1 18149823 . A . PASS END=18149823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 18149824 . G . PASS END=18149825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 18149826 . C . PASS END=18149826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 18149827 . T . PASS END=18149835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 18149836 . A . PASS END=18149836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 18149837 . A . PASS END=18149839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 18149840 . A . PASS END=18149840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:19,0 chr1 18149841 . A . PASS END=18149843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 18149844 . T . PASS END=18149844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 18149845 . G . PASS END=18149847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18149848 . G . PASS END=18149851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 18152262 . A . PASS END=18152267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 18152268 . T . PASS END=18152268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:27,0 chr1 18152269 . T . PASS END=18152269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 18152270 . T . PASS END=18152270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 18152271 . G . PASS END=18152273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 18152274 . T . PASS END=18152274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:27,0 chr1 18152275 . T . PASS END=18152438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1005:0,83,255:36,0 chr1 18152439 . G . PASS END=18152443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 18152444 . C . PASS END=18152447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 18152448 . G . PASS END=18152471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,886:0,64,255:26,0 chr1 18152472 . A . PASS END=18152472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,780:0,58,255:21,0 chr1 18152473 . G . PASS END=18152477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 18152478 . T . PASS END=18152482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 18152483 . G . PASS END=18152484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 18152485 . A . PASS END=18152486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 18152487 . G . PASS END=18152491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 18152492 . C . PASS END=18152492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:19,0 chr1 18152493 . G . PASS END=18152499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 18152500 . G . PASS END=18152500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr1 18152501 . C . PASS END=18152509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 18152510 . T . PASS END=18152536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,714:0,57,255:19,0 chr1 18152537 . G . PASS END=18152543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 18152544 . A . PASS END=18152552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 18152553 . G . PASS END=18152554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 18152555 . G . PASS END=18152555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 18152556 . C . PASS END=18152558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 18152559 . C . PASS END=18152573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 18152574 . G . PASS END=18152592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 18152593 . G . PASS END=18152605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 18152606 . C . PASS END=18152606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 18152607 . T . PASS END=18152609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 18152610 . G . PASS END=18152614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 18152615 . G . PASS END=18152615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 18152616 . A . PASS END=18152626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 18152627 . T . PASS END=18152627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 18152628 . C . PASS END=18152634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 18152635 . C . PASS END=18152635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 18152636 . A . PASS END=18152654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 18152655 . C . PASS END=18152655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 18152656 . T . PASS END=18152667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr1 18152668 . A . PASS END=18152668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 18152669 . G . PASS END=18152680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:25,0 chr1 18152681 . T . PASS END=18152681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 18152682 . G . PASS END=18152686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,925:0,75,255:25,0 chr1 18152687 . G . PASS END=18152688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,859:0,42,255:21,0 chr1 18152689 . T . PASS END=18152694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,856:0,61,255:23,0 chr1 18152695 . G . PASS END=18152695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:20,0 chr1 18152696 . C . PASS END=18152705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,845:0,69,255:23,0 chr1 18152706 . T . PASS END=18152706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 18152707 . T . PASS END=18152724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:23:0,68,861:0,68,255:26,0 chr1 18152725 . G . PASS END=18152731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 18152732 . A . PASS END=18152758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,77,255:28,0 chr1 18152759 . C . PASS END=18152759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 18152760 . T . PASS END=18152765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 18152766 . A . PASS END=18152766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 18152767 . T . PASS END=18152767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,864:0,64,255:26,0 chr1 18152768 . C . PASS END=18152796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:32,0 chr1 18152797 . T . PASS END=18152797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:30,0 chr1 18152798 . G . PASS END=18152816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1218:0,86,255:33,0 chr1 18152817 . A . PASS END=18152817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:30,0 chr1 18152818 . C . PASS END=18152994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:34:0,83,1131:0,83,255:40,0 chr1 18152995 . G . PASS END=18153002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:26,0 chr1 18153003 . A . PASS END=18153003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,953:0,40,255:21,0 chr1 18153004 . T . PASS END=18153012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,70,255:24,0 chr1 18153013 . G . PASS END=18153013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 18153014 . A . PASS END=18153014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 18434623 . A . PASS END=18434639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,476:0,45,255:16,0 chr1 18434640 . C . PASS END=18434640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 18434641 . C . PASS END=18434663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,537:0,41,255:19,0 chr1 18434664 . G . PASS END=18434670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 18434671 . G . PASS END=18434692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,657:0,41,255:19,0 chr1 18535385 . A . PASS END=18535425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,133,255:40,0 chr1 18535426 . C . PASS END=18535436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,155,255:40,0 chr1 18554392 . G . PASS END=18554504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:31:0,90,1148:0,91,255:40,0 chr1 18618360 . G . PASS END=18618366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1183:0,102,255:36,0 chr1 18618367 . A . PASS END=18618367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:34,0 chr1 18618368 . T . PASS END=18618446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1161:0,84,255:38,0 chr1 18618447 . A . PASS END=18618459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:27:0,66,990:0,71,255:27,0 chr1 18618460 . T . PASS END=18618472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:19:0,42,630:0,57,255:19,0 chr1 18618473 . C . PASS END=18618474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 18618475 . C . PASS END=18618475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 18618476 . T . PASS END=18618481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr1 18661386 . G . PASS END=18661388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 18661389 . G . PASS END=18661394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 18661395 . G . PASS END=18661395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 18661396 . G . PASS END=18661412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,987:0,81,255:28,0 chr1 18661413 . T . PASS END=18661416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:27,0 chr1 18661417 . C . PASS END=18661449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1019:0,80,255:31,0 chr1 18661450 . G . PASS END=18661450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 18661451 . C . PASS END=18661456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr1 18661457 . G . PASS END=18661457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 18661458 . G . PASS END=18661462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 18661463 . A . PASS END=18661463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 18661464 . G . PASS END=18661465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 18661466 . T . PASS END=18661493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,930:0,62,255:26,0 chr1 18661494 . C . PASS END=18661495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 18661496 . A . PASS END=18661500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 18661501 . A . PASS END=18661502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:20,0 chr1 18661503 . G . PASS END=18661504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 18688609 . C . PASS END=18688622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,917:0,65,255:26,0 chr1 18688623 . A . PASS END=18688623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 18688624 . T . PASS END=18688624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 18688625 . T . PASS END=18688639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 18688640 . T . PASS END=18688644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 18688645 . C . PASS END=18688646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18688647 . C . PASS END=18688664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,886:0,72,255:25,0 chr1 18688665 . T . PASS END=18688665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 18688666 . A . PASS END=18688682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,753:0,74,255:25,0 chr1 18688683 . A . PASS END=18688683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 18688684 . C . PASS END=18688694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 18688695 . A . PASS END=18688695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 18688696 . T . PASS END=18688709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 18688710 . A . PASS END=18688722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:19,0 chr1 18688723 . T . PASS END=18688724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 18691717 . G . PASS END=18691887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:31:0,86,1170:0,86,255:40,0 chr1 18691888 . G . PASS END=18691888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 18691889 . G . PASS END=18691892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1141:0,93,255:33,0 chr1 18691893 . G . PASS END=18691897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,990:0,99,255:25,0 chr1 18691898 . C . PASS END=18691899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 18691900 . T . PASS END=18691902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 18691903 . A . PASS END=18691941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1125:0,80,255:32,0 chr1 18691942 . A . PASS END=18691942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 18691943 . T . PASS END=18691948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,965:0,87,255:29,0 chr1 18691949 . T . PASS END=18691949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 18691950 . C . PASS END=18691967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 18691968 . C . PASS END=18691980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr1 18691981 . G . PASS END=18691986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 18691987 . A . PASS END=18691987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 18691988 . G . PASS END=18691991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 18691992 . T . PASS END=18692031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,839:0,65,255:26,0 chr1 18692032 . T . PASS END=18692032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 18692033 . T . PASS END=18692036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 18692037 . G . PASS END=18692038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,855:0,59,255:20,0 chr1 18692039 . G . PASS END=18692039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 18692040 . C . PASS END=18692045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:19,0 chr1 18692046 . C . PASS END=18692057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 18692058 . C . PASS END=18692058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 18692059 . A . PASS END=18692070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 18692071 . G . PASS END=18692071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 18692072 . T . PASS END=18692072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:27,0 chr1 18692073 . G . PASS END=18692172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1025:0,84,255:36,0 chr1 18692173 . C . PASS END=18692179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 18692180 . A . PASS END=18692191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:21:0,48,720:0,63,255:19,0 chr1 18702804 . T . PASS END=18702889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,137,255:40,0 chr1 18703294 . A . PASS END=18703299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,917:0,62,255:26,0 chr1 18703300 . G . PASS END=18703300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 18703301 . T . PASS END=18703301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 18703302 . C . PASS END=18703305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18703306 . C . PASS END=18703306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,930:0,37,255:25,0 chr1 18703307 . C . PASS END=18703449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1196:0,84,255:40,0 chr1 18703450 . G . PASS END=18703450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 18703451 . G . PASS END=18703453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 18703454 . C . PASS END=18703472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,976:0,65,255:26,0 chr1 18703473 . G . PASS END=18703473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:23,0 chr1 18703474 . C . PASS END=18703475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:24,0 chr1 18703476 . C . PASS END=18703476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 18703477 . A . PASS END=18703480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 18703481 . T . PASS END=18703481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 18703482 . G . PASS END=18703484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 18703485 . T . PASS END=18703486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 18703887 . A . PASS END=18703925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,145,255:40,0 chr1 18704750 . G . PASS END=18704820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:32:0,92,1166:0,92,255:40,0 chr1 18807476 . A . PASS END=18807498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 18807499 . C . PASS END=18807501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 18807502 . G . PASS END=18807507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 18807508 . G . PASS END=18807524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,729:0,57,255:19,0 chr1 18807525 . T . PASS END=18807535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,717:0,60,255:21,0 chr1 18807536 . G T, 22.21 PASS DP=22;MQ=250.00;MQRankSum=3.262;ReadPosRankSum=2.023;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,5,0:0.238,0.000:21:7,3,0:9,2,0:22:57,0,50,179,564,743:123,0,255:15,0:2.2214e+01,2.6186e-02,5.3026e+01,1.7888e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,5,0:8,8,3,2 chr1 18807537 . T . PASS END=18807538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18807539 . G . PASS END=18807540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807541 . G . PASS END=18807548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 18807549 . C . PASS END=18807549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807550 . C . PASS END=18807550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18807551 . G . PASS END=18807553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807554 . G . PASS END=18807572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 18807573 . T . PASS END=18807573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 18807574 . G . PASS END=18807575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 18807576 . C . PASS END=18807576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 18807577 . C . PASS END=18807582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 18807583 . G . PASS END=18807597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,684:0,57,255:19,0 chr1 18807598 . G . PASS END=18807608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 18807609 . C . PASS END=18807609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 18807610 . C . PASS END=18807610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18807611 . C . PASS END=18807612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807613 . G . PASS END=18807619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 18807620 . G C,A, 47.39 PASS DP=22;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=1.603;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,8,1,0:0.364,0.045,0.000:22:4,3,0,0:9,5,1,0:46:82,0,50,249,429,299,284,465,713,748:255,0,255:12,0:4.7392e+01,1.0096e-04,5.3000e+01,2.4891e+02,4.5000e+02,3.0191e+02,2.8360e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:6,7,5,4:7,6,5,4 chr1 18807621 . G . PASS END=18807622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 18807623 . G . PASS END=18807626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807627 . A . PASS END=18807635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 18807636 . C . PASS END=18807636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 18807637 . A . PASS END=18807657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 18807658 . G . PASS END=18807674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr1 18807675 . C . PASS END=18807675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 18807676 . T . PASS END=18807717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,839:0,62,255:26,0 chr1 18807718 . A . PASS END=18807718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,852:0,48,255:23,0 chr1 18807719 . C . PASS END=18807736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:25,0 chr1 18807737 . C . PASS END=18807737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 18807738 . G . PASS END=18807740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 18807741 . C . PASS END=18807741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 18807742 . T . PASS END=18807744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 18807745 . A . PASS END=18807753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 18807754 . G . PASS END=18807754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 18807755 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=2.433;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:7,5,0:4,8,0:48:85,0,50,428,389,818:255,0,255:9,0:5.0000e+01,6.6786e-05,5.2708e+01,4.2824e+02,4.2419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,3,10:4,7,5,8 chr1 18807756 . G . PASS END=18807765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 18807766 . T . PASS END=18807770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807771 . A . PASS END=18807777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 18807778 . A . PASS END=18807778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:17,0 chr1 18807779 . G . PASS END=18807780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 18807781 . C T, 49.97 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=1.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:6,4,0:5,6,0:47:85,0,47,185,185,185:255,0,255:10,0:4.9974e+01,8.7237e-05,5.0000e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,6,3,7:6,5,3,7 chr1 18807782 . C . PASS END=18807790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 18807791 . C . PASS END=18807796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18807797 . A . PASS END=18807797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 18807798 . C . PASS END=18807798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 18807799 . G . PASS END=18807818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:16:0,41,673:0,41,255:19,0 chr1 18807819 . G . PASS END=18807859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,607:0,45,255:18,0 chr1 18807860 . C . PASS END=18807862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr1 18807863 . G . PASS END=18807896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 18807897 . C G, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,13,0:0,9,0:63:151,66,0,836,66,836:255,66,0:0,0:1.1321e+02,6.3208e+01,2.0709e-06,4.5000e+02,9.7978e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,8:0,0,11,11 chr1 18807898 . C . PASS END=18807906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 18807907 . A . PASS END=18807912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807913 . A . PASS END=18807913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 18807914 . A . PASS END=18807915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807916 . A . PASS END=18807916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18807917 . G . PASS END=18807917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 18807918 . C . PASS END=18807928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,701:0,63,255:23,0 chr1 18807929 . A . PASS END=18807929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 18807930 . A . PASS END=18807933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 18807934 . T . PASS END=18807934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 18807935 . G . PASS END=18807943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:20,0 chr1 18807944 . C . PASS END=18807952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr1 18807953 . C A, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.502;ReadPosRankSum=-0.774;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,16,0:0.727,0.000:22:3,7,0:3,9,0:42:85,0,40,535,215,750:255,0,167:6,0:5.0000e+01,2.5887e-04,4.3043e+01,4.5000e+02,2.4931e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,1,11,5:2,4,8,8 chr1 18807954 . G . PASS END=18807955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 18807956 . T . PASS END=18807956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 18807957 . T . PASS END=18807970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr1 18807971 . A . PASS END=18807971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 18807972 . A . PASS END=18807972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18807973 . G . PASS END=18807973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18807974 . A . PASS END=18807975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18807976 . C . PASS END=18807976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 18807977 . T . PASS END=18807987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 18807988 . A . PASS END=18807988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,743:0,14,255:19,0 chr1 18807989 . C . PASS END=18807990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 18807991 . C . PASS END=18807991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 18807992 . A . PASS END=18807992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:21,0 chr1 18807993 . T . PASS END=18807996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 18807997 . A . PASS END=18808000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 18808001 . G . PASS END=18808003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 18808004 . G . PASS END=18808004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:20,0 chr1 18808005 . A . PASS END=18808009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 18808010 . A . PASS END=18808010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 18808011 . G . PASS END=18808012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 18808013 . T . PASS END=18808013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 18808014 . G . PASS END=18808018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 18808019 . G . PASS END=18808023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 18808024 . T . PASS END=18808024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18808025 . G . PASS END=18808026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 18808027 . G . PASS END=18808050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 18808051 . A . PASS END=18808051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,922:0,76,255:27,0 chr1 18808052 . C . PASS END=18808055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 18808056 . G C, 49.73 PASS DP=30;MQ=247.16;MQRankSum=3.970;ReadPosRankSum=1.226;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:7,6,0:9,8,0:47:85,0,47,185,185,185:255,0,255:15,0:4.9732e+01,8.9566e-05,5.0000e+01,1.8450e+02,2.1927e+02,1.8751e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,11,5,9:6,10,5,9 chr1 18808057 . T . PASS END=18808068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:32,0 chr1 18808069 . A G, 49.80 PASS DP=34;MQ=246.75;MQRankSum=4.330;ReadPosRankSum=3.226;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,16,0:0.471,0.000:34:9,6,0:9,10,0:48:85,0,50,572,604,1176:255,0,255:15,0:4.9797e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,10,6:5,13,6,10 chr1 18808070 . C . PASS END=18808084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:34,0 chr1 18808085 . C . PASS END=18808085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 18808086 . C . PASS END=18808106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,102,1304:0,105,255:37,0 chr1 18808107 . C . PASS END=18808112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1311:0,105,255:35,0 chr1 18808113 . T . PASS END=18808113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:34,0 chr1 18808114 . G . PASS END=18808125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1302:0,89,255:35,0 chr1 18808126 . T . PASS END=18808126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr1 18808127 . G . PASS END=18808230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1210:0,86,255:37,0 chr1 18808231 . G . PASS END=18808235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:66:35:0,66,1173:0,66,255:33,0 chr1 18808236 . G . PASS END=18808236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 18808237 . C . PASS END=18808237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 18808238 . G . PASS END=18808240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:30,0 chr1 18808241 . C . PASS END=18808248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1180:0,60,255:30,0 chr1 18808249 . C . PASS END=18808252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1102:0,54,255:25,0 chr1 18808253 . T . PASS END=18808253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:25,0 chr1 18808254 . A . PASS END=18808254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:25,0 chr1 18808255 . T . PASS END=18808256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:25,0 chr1 18808257 . C . PASS END=18808258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:48:29:0,48,1024:0,48,255:25,0 chr1 18808259 . T . PASS END=18808259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:24,0 chr1 18808260 . T . PASS END=18808260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,811:0,39,255:25,0 chr1 18808261 . C . PASS END=18808261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 18808262 . T . PASS END=18808262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 18808263 . C . PASS END=18808264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 18808265 . T . PASS END=18808265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,928:0,15,255:25,0 chr1 18808266 . C . PASS END=18808267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 18808268 . A . PASS END=18808268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1000:0,43,255:26,0 chr1 18808269 . T . PASS END=18808269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 18808270 . A . PASS END=18808270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:27,0 chr1 18808271 . G . PASS END=18808271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 18808272 . C . PASS END=18808273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:28,0 chr1 18808274 . C . PASS END=18808274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,978:0,35,255:27,0 chr1 18808275 . G . PASS END=18808275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:28,0 chr1 18808276 . C . PASS END=18808276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 18808277 . G . PASS END=18808277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr1 18808278 . T . PASS END=18808278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 18808279 . C . PASS END=18808279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 18808280 . C . PASS END=18808280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1006:0,35,255:26,0 chr1 18808281 . G . PASS END=18808281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 18808282 . A . PASS END=18808284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:51:30:0,51,917:0,51,255:26,0 chr1 18808285 . G . PASS END=18808285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:25,0 chr1 18808286 . G . PASS END=18808286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:25,0 chr1 18808287 . A . PASS END=18808288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 18808289 . G . PASS END=18808289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:24,0 chr1 18808290 . A . PASS END=18808290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,947:0,32,255:24,0 chr1 18808291 . G . PASS END=18808291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:24,0 chr1 18808292 . C A, 126.89 PASS DP=28;MQ=246.12;FractionInformativeReads=0.964 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,9,0:0,18,0:77:165,80,0,959,80,959:255,48,0:1,0:1.2689e+02,7.6889e+01,0.0000e+00,4.5000e+02,1.1166e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,18:0,0,17,10 chr1 18808293 . A . PASS END=18808294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1029:0,71,255:26,0 chr1 18808295 . T . PASS END=18808296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:28:0,45,931:0,45,255:26,0 chr1 18808297 . C . PASS END=18808298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18808299 . T . PASS END=18808299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 18808300 . A . PASS END=18808301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:26,0 chr1 18808302 . A . PASS END=18808313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr1 18808314 . G . PASS END=18808314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,831:0,23,255:21,0 chr1 18808315 . G . PASS END=18808329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,884:0,72,255:24,0 chr1 18808330 . C . PASS END=18808337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 18808338 . A . PASS END=18808376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,668:0,41,255:19,0 chr1 18808377 . T . PASS END=18808377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 18808378 . C . PASS END=18808379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 18808380 . T . PASS END=18808380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:14,0 chr1 18808381 . C . PASS END=18808391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 18808392 . T . PASS END=18808392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:12,0 chr1 18808393 . G . PASS END=18808393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 18808394 . G . PASS END=18808398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 18808399 . C . PASS END=18808399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 18808400 . A . PASS END=18808401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 18808402 . G . PASS END=18808403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 18808404 . C . PASS END=18808404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 18808405 . A . PASS END=18808405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 18808406 . G . PASS END=18808425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,519:0,42,255:14,0 chr1 18808426 . A . PASS END=18808427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 18808428 . C . PASS END=18808448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 18808449 . C . PASS END=18808464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 18808465 . T A, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,11,0:0,4,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,7:0,0,10,5 chr1 18808466 . G . PASS END=18808477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 18808478 . C . PASS END=18808483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 18808484 . G . PASS END=18808484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 18808485 . G . PASS END=18808491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 18808492 . A . PASS END=18808492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 18808493 . A . PASS END=18808494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 18808495 . G . PASS END=18808497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 18808498 . T . PASS END=18808521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,410:0,33,255:13,0 chr1 18808522 . G . PASS END=18808522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 18808523 . C . PASS END=18808525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 18808526 . A C, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,8,0:0,7,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,8:0,0,8,7 chr1 18808527 . C . PASS END=18808563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 18808564 . G . PASS END=18808580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 18808581 . T . PASS END=18808584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 18808585 . G . PASS END=18808585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 18808586 . G . PASS END=18808586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 18808587 . A . PASS END=18808613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr1 18808614 . A . PASS END=18808618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 18808619 . T . PASS END=18808627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 18808628 . C . PASS END=18808628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr1 18808629 . C . PASS END=18808648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:32:12:0,32,495:0,32,255:13,0 chr1 18808649 . C . PASS END=18808649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:13,0 chr1 18808650 . C . PASS END=18808652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 18808653 . G . PASS END=18808660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 18808661 . C . PASS END=18808661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 18808662 . C . PASS END=18808663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 18808664 . G . PASS END=18808664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 18808665 . G . PASS END=18808666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 18808667 . T . PASS END=18808667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 18808668 . T . PASS END=18808669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 18808670 . G . PASS END=18808670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 18808671 . G . PASS END=18808679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 18808680 . G . PASS END=18808680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 18808681 . C . PASS END=18808685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 18808686 . A . PASS END=18808686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 18808687 . G . PASS END=18808697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 18808698 . A . PASS END=18808698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 18808699 . G . PASS END=18808836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,582:0,40,255:19,0 chr1 18808837 . C . PASS END=18808838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18808839 . A . PASS END=18808839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 18808840 . C . PASS END=18808843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18808844 . G . PASS END=18808844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 18808845 . T . PASS END=18808854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 18808855 . A . PASS END=18808855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 18808856 . A . PASS END=18808857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 18808858 . C . PASS END=18808859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 18808860 . A . PASS END=18808863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18808864 . G . PASS END=18808867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18808868 . G . PASS END=18808874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 18808875 . G . PASS END=18808901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,643:0,40,255:19,0 chr1 18808902 . G . PASS END=18808907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18808908 . C . PASS END=18808916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 18808917 . A . PASS END=18808949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,770:0,60,255:23,0 chr1 18808950 . A . PASS END=18808956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,754:0,52,255:19,0 chr1 18808957 . G . PASS END=18808970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 18808971 . T . PASS END=18808971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:19,0 chr1 18808972 . G . PASS END=18808982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 18808983 . A . PASS END=18808993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,676:0,43,255:19,0 chr1 18808994 . G . PASS END=18808994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:17,0 chr1 18808995 . G . PASS END=18809001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,639:0,44,255:19,0 chr1 18809002 . T . PASS END=18809002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,627:0,5,255:18,0 chr1 18809003 . T . PASS END=18809014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr1 18809015 . G . PASS END=18809022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:22,0 chr1 18809023 . T . PASS END=18809023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 18809024 . G . PASS END=18809024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 18809025 . T . PASS END=18809025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr1 18809026 . C . PASS END=18809038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 18809039 . G . PASS END=18809039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 18809040 . C . PASS END=18809040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 18809041 . T . PASS END=18809049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 18809050 . C . PASS END=18809063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 18809064 . C . PASS END=18809064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 18809065 . C . PASS END=18809065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 18809066 . C . PASS END=18809068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 18809069 . G . PASS END=18809071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 18809072 . T . PASS END=18809072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:25,0 chr1 18809073 . G . PASS END=18809091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,891:0,64,255:26,0 chr1 18809092 . C . PASS END=18809093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18809094 . A . PASS END=18809097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 18809098 . T . PASS END=18809099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,856:0,42,255:25,0 chr1 18809100 . T . PASS END=18809118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,990:0,65,255:25,0 chr1 18809119 . C . PASS END=18809120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:23,0 chr1 18809121 . A . PASS END=18809139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,862:0,72,255:26,0 chr1 18809140 . C . PASS END=18809192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,950:0,81,255:31,0 chr1 18809193 . G . PASS END=18809193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 18809194 . C . PASS END=18809194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:22,0 chr1 18809195 . C . PASS END=18809206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 18809207 . G . PASS END=18809221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:16,0 chr1 18809222 . C . PASS END=18809223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 18809224 . G . PASS END=18809235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 18809236 . G . PASS END=18809236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 18809237 . G . PASS END=18809238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 18809239 . C . PASS END=18809239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 18809240 . G . PASS END=18809241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 18809242 . G . PASS END=18809242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 18809243 . C . PASS END=18809243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 18809244 . A . PASS END=18809244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 18809245 . C . PASS END=18809263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 18809264 . G . PASS END=18809264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 18809265 . A . PASS END=18809287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,668:0,43,255:19,0 chr1 18809288 . T . PASS END=18809288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18809289 . A . PASS END=18809314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:17:0,41,629:0,41,255:19,0 chr1 18809315 . T . PASS END=18809315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr1 18809316 . T . PASS END=18809328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,592:0,48,255:18,0 chr1 18809329 . C . PASS END=18809344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 18809345 . G . PASS END=18809347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18809348 . C . PASS END=18809358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 18809359 . G . PASS END=18809359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 18809360 . G . PASS END=18809362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 18809363 . A . PASS END=18809363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18809364 . C . PASS END=18809375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 18809376 . A . PASS END=18809376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 18809377 . G . PASS END=18809377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 18809378 . G . PASS END=18809378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 18809379 . A . PASS END=18809392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,817:0,69,255:23,0 chr1 18809393 . G . PASS END=18809394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 18809395 . C . PASS END=18809397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 18809398 . C . PASS END=18809423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,645:0,50,255:19,0 chr1 18809424 . T . PASS END=18809424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 18809425 . C . PASS END=18809454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:19,0 chr1 18809455 . C . PASS END=18809455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 18809456 . C . PASS END=18809456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 18809457 . C . PASS END=18809465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 18809466 . G . PASS END=18809467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 18809468 . A . PASS END=18809472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 18809473 . G . PASS END=18809473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 18809474 . G . PASS END=18809486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 18809487 . A . PASS END=18809487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 18809488 . G . PASS END=18809492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 18809493 . T . PASS END=18809493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 18809494 . G . PASS END=18809496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 18809497 . G . PASS END=18809497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 18809498 . G . PASS END=18809503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 18809504 . G . PASS END=18809509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,810:0,53,255:20,0 chr1 18809510 . C . PASS END=18809521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 18809522 . G . PASS END=18809530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 18809531 . C . PASS END=18809545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 18809546 . G . PASS END=18809552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 18809553 . A . PASS END=18809553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 18809554 . C . PASS END=18809554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 18809555 . C . PASS END=18809555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 18809556 . G . PASS END=18809567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 18809568 . G . PASS END=18809644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,914:0,65,255:26,0 chr1 18809645 . C . PASS END=18809649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 18809650 . C . PASS END=18809681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 18809682 . T . PASS END=18809716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 18809717 . A . PASS END=18809717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 18809718 . A . PASS END=18809751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 18809752 . C . PASS END=18809769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:13,0 chr1 18809770 . G . PASS END=18809798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:8,0 chr1 18809799 . C . PASS END=18809801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 18809802 . G . PASS END=18809802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr1 18809803 . G . PASS END=18809805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 18809806 . C . PASS END=18809809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 18958098 . A . PASS END=18958134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1286:0,89,255:38,0 chr1 18958135 . G . PASS END=18958135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:37,0 chr1 18958136 . G . PASS END=18958182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,101,1412:0,101,255:39,0 chr1 18960796 . G . PASS END=18960807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,706:0,46,255:19,0 chr1 18960808 . C . PASS END=18960874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:23,0 chr1 18960875 . T . PASS END=18960919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 18960920 . G . PASS END=18960930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 18960931 . C . PASS END=18960935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 18960936 . G . PASS END=18960936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 18960937 . C . PASS END=18960974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,630:0,41,255:19,0 chr1 18960975 . C . PASS END=18960986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 18960987 . G . PASS END=18960987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 18960988 . A . PASS END=18961032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 18961605 . C . PASS END=18961613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 18961614 . A . PASS END=18961614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 18961615 . C . PASS END=18961621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr1 18961622 . T . PASS END=18961633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,879:0,67,255:27,0 chr1 18961634 . G . PASS END=18961687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1055:0,80,255:32,0 chr1 18961688 . C . PASS END=18961710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,68,255:26,0 chr1 18961711 . G . PASS END=18961714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 18961715 . C . PASS END=18961715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 18961716 . C . PASS END=18961729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,668:0,43,255:19,0 chr1 18961730 . C . PASS END=18961730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 18961731 . T . PASS END=18961734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr1 18962731 . G . PASS END=18962746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1340:0,90,255:40,0 chr1 18962747 . T . PASS END=18962747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1382:0,68,255:40,0 chr1 18962748 . A . PASS END=18962865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,99,1456:0,99,255:40,0 chr1 19018248 . G . PASS END=19018262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 19018263 . A . PASS END=19018263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 19018264 . G . PASS END=19018264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 19018265 . G . PASS END=19018265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 19018266 . G . PASS END=19018270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 19018271 . G . PASS END=19018272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 19018273 . T . PASS END=19018273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 19018274 . G . PASS END=19018287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,754:0,63,255:25,0 chr1 19018288 . T . PASS END=19018288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 19018289 . G . PASS END=19018301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:25,0 chr1 19018302 . A . PASS END=19018302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 19018303 . G . PASS END=19018315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:24,0 chr1 19018316 . C . PASS END=19018316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,883:0,31,255:21,0 chr1 19018317 . G . PASS END=19018317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 19018318 . C . PASS END=19018355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,786:0,66,255:24,0 chr1 19018356 . T . PASS END=19018356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 19018357 . G . PASS END=19018360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 19018361 . A . PASS END=19018361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:23,0 chr1 19018362 . A . PASS END=19018363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 19018364 . G . PASS END=19018374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1001:0,84,255:28,0 chr1 19018375 . G . PASS END=19018380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 19018381 . C . PASS END=19018409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1055:0,80,255:32,0 chr1 19018410 . T . PASS END=19018438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 19018439 . C . PASS END=19018439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 19018440 . G . PASS END=19018444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 19018445 . C . PASS END=19018445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 19018446 . A . PASS END=19018447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 19027147 . G . PASS END=19027156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 19027157 . G . PASS END=19027233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 19027234 . T . PASS END=19027234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 19027235 . T . PASS END=19027235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 19027236 . C . PASS END=19027236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 19027237 . C . PASS END=19027261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,255:0,21,255:9,0 chr1 19027262 . C . PASS END=19027303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr1 19027304 . T . PASS END=19027304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr1 19027305 . C . PASS END=19027312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,194:0,18,194:6,0 chr1 19029588 . A . PASS END=19029641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:29:0,86,1078:0,86,255:40,0 chr1 19029642 . A . PASS END=19029642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:35,0 chr1 19029643 . G . PASS END=19029736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1161:0,81,255:37,0 chr1 19029737 . C . PASS END=19029737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 19029738 . C . PASS END=19029744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 19029745 . G . PASS END=19029745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 19029746 . C . PASS END=19029750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19029751 . C . PASS END=19029790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:25,0 chr1 19062126 . G . PASS END=19062145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 19062146 . C . PASS END=19062146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 19062147 . C . PASS END=19062176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 19062177 . G . PASS END=19062178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 19062179 . C . PASS END=19062180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 19062181 . T . PASS END=19062181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 19062182 . C . PASS END=19062183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 19062184 . C . PASS END=19062184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 19062185 . C . PASS END=19062224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 19062225 . A . PASS END=19062227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 19062228 . T . PASS END=19062256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,421:0,36,255:13,0 chr1 19062257 . C . PASS END=19062257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 19062258 . A . PASS END=19062268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,450:0,39,255:13,0 chr1 19062269 . A . PASS END=19062269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 19062270 . G . PASS END=19062272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 19062273 . A . LowGQ END=19062273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,313:14,0,255:11,0 chr1 19062274 . G . PASS END=19062274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 19062275 . C . PASS END=19062286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 19062287 . C . PASS END=19062287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 19062288 . C . PASS END=19062290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 19062291 . G . PASS END=19062291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 19062292 . C . PASS END=19062295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 19062296 . C . PASS END=19062302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 19062303 . C . PASS END=19062303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 19062304 . C . PASS END=19062304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 19062305 . C . PASS END=19062313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 19062314 . C . PASS END=19062314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 19062315 . A . PASS END=19062316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19062317 . C . PASS END=19062317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 19062318 . A . PASS END=19062345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:12:0,32,435:0,32,255:13,0 chr1 19062346 . G . PASS END=19062346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 19062347 . C . PASS END=19062385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,397:0,36,255:13,0 chr1 19062386 . G . PASS END=19062398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:18,0 chr1 19062399 . C . PASS END=19062399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19062400 . C . PASS END=19062402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 19062403 . T . PASS END=19062451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:26,0 chr1 19062452 . C . PASS END=19062524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1119:0,83,255:34,0 chr1 19062525 . T . PASS END=19062533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 19071308 . C . PASS END=19071308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:27,0 chr1 19071309 . T . PASS END=19071309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 19071310 . G . PASS END=19071311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,903:0,48,255:27,0 chr1 19071312 . T . PASS END=19071312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,894:0,70,255:27,0 chr1 19071313 . G . PASS END=19071313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 19071314 . T . PASS END=19071314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 19071315 . T . PASS END=19071315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 19071316 . G . PASS END=19071316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 19071317 . A . PASS END=19071317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,925:0,35,255:28,0 chr1 19071318 . T . PASS END=19071318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 19071319 . T . PASS END=19071320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 19071321 . T . PASS END=19071321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 19071322 . C . PASS END=19071322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 19071323 . T . PASS END=19071323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,984:0,43,255:27,0 chr1 19071324 . G . PASS END=19071324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:29,0 chr1 19071325 . G . PASS END=19071326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 19071327 . C . PASS END=19071327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 19071328 . A . PASS END=19071328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 19071329 . A . PASS END=19071329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 19071330 . A . PASS END=19071331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 19071332 . A . PASS END=19071332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 19071333 . T . PASS END=19071334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1108:0,65,255:31,0 chr1 19071335 . T . PASS END=19071337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 19071338 . G . PASS END=19071338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr1 19071339 . C . PASS END=19071366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1126:0,91,255:35,0 chr1 19071367 . G . PASS END=19071367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:30,0 chr1 19071368 . G . PASS END=19071373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:32,0 chr1 19071374 . A . PASS END=19071411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,764:0,66,255:26,0 chr1 19071412 . C . PASS END=19071423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,731:0,49,255:19,0 chr1 19166093 . C . PASS END=19166093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 19166094 . T . PASS END=19166094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 19166095 . A . PASS END=19166103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,799:0,66,255:24,0 chr1 19166104 . T . PASS END=19166104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 19166105 . C . PASS END=19166106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:24,0 chr1 19166107 . T . PASS END=19166107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,737:0,25,255:22,0 chr1 19166108 . G . PASS END=19166109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:24:0,71,862:0,71,255:28,0 chr1 19166110 . T . PASS END=19166111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1060:0,87,255:29,0 chr1 19166112 . T . PASS END=19166113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 19166114 . G . PASS END=19166127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 19166128 . T . PASS END=19166128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 19166129 . G . PASS END=19166329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:34:0,85,1150:0,85,255:40,0 chr1 19166330 . G . PASS END=19166330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1213:0,62,255:36,0 chr1 19166331 . A . PASS END=19166432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:38:0,83,1361:0,83,255:40,0 chr1 19166433 . C . PASS END=19166433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:34,0 chr1 19166434 . T . PASS END=19166452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1372:0,98,255:35,0 chr1 19166453 . A . PASS END=19166453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:32,0 chr1 19166454 . C . PASS END=19166474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1318:0,92,255:34,0 chr1 19166475 . G . PASS END=19166475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:30,0 chr1 19166476 . G . PASS END=19166495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1208:0,83,255:30,0 chr1 19166496 . G . PASS END=19166496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 19166497 . T . PASS END=19166504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 19166505 . C . PASS END=19166529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 19166530 . T . PASS END=19166530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19166531 . T . PASS END=19166557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,68,255:26,0 chr1 19166558 . G . PASS END=19166584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 19166585 . C . PASS END=19166593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 19166594 . G . PASS END=19166597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 19166598 . C . PASS END=19166601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 19166602 . A . PASS END=19166630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 19166631 . A . PASS END=19166636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 19166637 . A . PASS END=19166649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 19166650 . T . PASS END=19166656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 19166657 . A . PASS END=19166657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 19166658 . G . PASS END=19166658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 19166659 . A . PASS END=19166659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 19166660 . A . PASS END=19166666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 19166667 . G . PASS END=19166667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 19166668 . C . PASS END=19166680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,986:0,70,255:26,0 chr1 19166681 . G . PASS END=19166687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 19166688 . G . PASS END=19166688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 19166689 . T . PASS END=19166696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 19166697 . A . PASS END=19166697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 19166698 . G . PASS END=19166704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 19166705 . G . PASS END=19166705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 19166706 . A . PASS END=19166707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 19166708 . G . PASS END=19166708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:26,0 chr1 19166709 . G . PASS END=19166709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 19166710 . C . PASS END=19166710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19166711 . C . PASS END=19166712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 19166713 . G . PASS END=19166722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 19166723 . G . PASS END=19166737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,992:0,65,255:26,0 chr1 19166738 . G . PASS END=19166743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 19166744 . C . PASS END=19166745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 19166746 . C . PASS END=19166764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:30,0 chr1 19166765 . C . PASS END=19166765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 19166766 . A . PASS END=19166788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 19166789 . C . PASS END=19166800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:26:0,71,1053:0,71,255:25,0 chr1 19166801 . G . PASS END=19166807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 19166808 . G . PASS END=19166824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,925:0,75,255:26,0 chr1 19166825 . A . PASS END=19166903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1017:0,82,255:31,0 chr1 19166904 . G . PASS END=19166904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:29,0 chr1 19166905 . C . PASS END=19167014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:34:0,93,1319:0,93,255:40,0 chr1 19167015 . T . PASS END=19167015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1230:0,75,255:30,0 chr1 19167016 . A . PASS END=19167021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1395:0,99,255:32,0 chr1 19168223 . C . PASS END=19168242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,800:0,63,255:26,0 chr1 19168243 . G . PASS END=19168251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 19168252 . A . PASS END=19168259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 19168260 . G . PASS END=19168261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19168262 . T . PASS END=19168262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19168263 . G . PASS END=19168267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 19168268 . C . PASS END=19168272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 19168273 . C . PASS END=19168273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19168274 . A . PASS END=19168274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 19168275 . G . PASS END=19168278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19168279 . A . PASS END=19168333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,693:0,61,255:26,0 chr1 19168334 . T . PASS END=19168346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:18,0 chr1 19175835 . C . PASS END=19175849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,795:0,61,255:25,0 chr1 19175850 . G . PASS END=19175859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1003:0,81,255:29,0 chr1 19175860 . A . PASS END=19175860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:28,0 chr1 19175861 . T . PASS END=19175873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1164:0,83,255:35,0 chr1 19175874 . C . PASS END=19175874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:33,0 chr1 19175875 . T . PASS END=19175976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:35:0,98,1357:0,98,255:40,0 chr1 19175977 . C . PASS END=19175977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:34,0 chr1 19175978 . C . PASS END=19175983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:34,0 chr1 19175984 . G . PASS END=19175984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 19175985 . G . PASS END=19176000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:34,0 chr1 19176001 . T . PASS END=19176014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,77,255:26,0 chr1 19176015 . G . PASS END=19176015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19176016 . A . PASS END=19176016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1013:0,76,255:27,0 chr1 19176017 . A . PASS END=19176017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr1 19176018 . G . PASS END=19176019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr1 19176020 . T . PASS END=19176020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,925:0,54,255:25,0 chr1 19176021 . G . PASS END=19176021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19176022 . A . PASS END=19176044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,872:0,62,255:26,0 chr1 19180707 . C . PASS END=19180713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr1 19180714 . G . PASS END=19180734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:22,0 chr1 19180735 . C . PASS END=19180735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 19180736 . A . PASS END=19180742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,847:0,69,255:23,0 chr1 19180743 . T . PASS END=19180743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr1 19180744 . T . PASS END=19180754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:26,0 chr1 19180755 . G . PASS END=19180760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:31,0 chr1 19180761 . G . PASS END=19180761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 19180762 . C . PASS END=19180977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1177:0,80,255:40,0 chr1 19180978 . C . PASS END=19180984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 19180985 . T . PASS END=19180985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:31,0 chr1 19180986 . G . PASS END=19181014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1263:0,89,255:34,0 chr1 19181015 . G C, 49.96 PASS DP=36;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=-0.281;FractionInformativeReads=0.972;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:10,10,0:8,7,0:48:85,0,50,608,609,1216:255,0,255:14,0:4.9961e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,9,8:9,9,12,5 chr1 19181016 . C . PASS END=19181059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1186:0,83,255:32,0 chr1 19181060 . C . PASS END=19181060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 19181061 . G . PASS END=19181065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 19181066 . C . PASS END=19181066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 19181067 . G . PASS END=19181068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 19181069 . T . PASS END=19181074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr1 19181075 . C . PASS END=19181076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19181077 . G . PASS END=19181077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 19181078 . C . PASS END=19181079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19181080 . C . PASS END=19181081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 19181082 . A C, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=3.830;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:6,7,0:6,8,0:48:85,0,49,500,392,892:255,0,255:11,0:5.0000e+01,6.9375e-05,5.2255e+01,4.5000e+02,4.2723e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,8,7:5,7,8,7 chr1 19181083 . G . PASS END=19181087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19181088 . G . PASS END=19181090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19181091 . C . PASS END=19181091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 19181092 . T . PASS END=19181093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 19181094 . G . PASS END=19181094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19181095 . C . PASS END=19181102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 19181103 . C . PASS END=19181107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19181108 . T . PASS END=19181108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19181109 . G . PASS END=19181109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 19181110 . A . PASS END=19181111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19181112 . G . PASS END=19181112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19181113 . A . PASS END=19181113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19181114 . A . PASS END=19181119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:25,0 chr1 19181120 . A . PASS END=19181127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 19181128 . A . PASS END=19181128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 19181129 . G . PASS END=19181136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1000:0,68,255:25,0 chr1 19181137 . G . PASS END=19181137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 19181138 . A . PASS END=19181147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,74,255:23,0 chr1 19181148 . C . PASS END=19181165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:19:0,44,720:0,44,255:19,0 chr1 19181166 . C . PASS END=19181176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 19181177 . T . PASS END=19181177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 19181178 . G . PASS END=19181197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 19181198 . G . PASS END=19181198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 19181199 . C . PASS END=19181203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 19181204 . G . PASS END=19181204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 19181205 . C . PASS END=19181208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 19181209 . T . PASS END=19181209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 19181210 . C . PASS END=19181210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19181211 . T . PASS END=19181211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 19181212 . G . PASS END=19181221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 19181222 . T . PASS END=19181274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:16:0,41,651:0,41,255:19,0 chr1 19181275 . C . PASS END=19181300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr1 19181301 . C . PASS END=19181316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:19,0 chr1 19181317 . C . PASS END=19181318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 19181319 . A . PASS END=19181319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 19181320 . T . PASS END=19181320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19181321 . A . PASS END=19181321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 19181322 . G . PASS END=19181330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 19181331 . G . PASS END=19181333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 19181334 . C . PASS END=19181346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:21,0 chr1 19181347 . A . PASS END=19181347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 19181348 . T . PASS END=19181355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 19181356 . C . PASS END=19181356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 19181357 . A . PASS END=19181364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:23,0 chr1 19181365 . T . PASS END=19181366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 19181367 . C . PASS END=19181369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 19181370 . C . PASS END=19181370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 19181371 . A . PASS END=19181374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 19181375 . G . PASS END=19181375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 19181376 . C . PASS END=19181383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19181384 . T . PASS END=19181384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 19181385 . G . PASS END=19181392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 19181393 . T C, 50.00 PASS DP=25;MQ=250.00;MQRankSum=3.932;ReadPosRankSum=2.825;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,17,0:0.680,0.000:25:2,11,0:6,6,0:44:85,0,42,608,257,865:255,0,213:7,0:5.0000e+01,1.7033e-04,4.5340e+01,4.5000e+02,2.9208e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,6,10,7:6,2,10,7 chr1 19181394 . G . PASS END=19181406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 19181407 . C . PASS END=19181407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 19181408 . T . PASS END=19181411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 19181412 . T . PASS END=19181429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,670:0,56,255:19,0 chr1 19181430 . C . PASS END=19181430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 19181431 . G . PASS END=19181445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 19181446 . T . PASS END=19181446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,670:0,38,255:21,0 chr1 19181447 . C . PASS END=19181449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 19181450 . G . PASS END=19181450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 19181451 . C . PASS END=19181457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 19181458 . T . PASS END=19181458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:19,0 chr1 19181459 . C . PASS END=19181463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 19181464 . A . PASS END=19181464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,0 chr1 19181465 . T . PASS END=19181480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:19:0,54,810:0,56,255:19,0 chr1 19183825 . C . PASS END=19184022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1091:0,80,255:40,0 chr1 19184023 . G . PASS END=19184023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:27,0 chr1 19184024 . C . PASS END=19184024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 19184025 . C . PASS END=19184039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1031:0,71,255:26,0 chr1 19184040 . G . PASS END=19184076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,961:0,75,255:26,0 chr1 19184077 . A G, 48.89 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=1.194;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:3,5,0:12,6,0:46:84,0,47,184,184,184:255,0,255:12,0:4.8895e+01,9.9403e-05,5.0000e+01,1.8366e+02,2.1843e+02,1.8667e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,11,3,8:12,3,7,4 chr1 19184078 . A . PASS END=19184078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 19184079 . A . PASS END=19184079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,760:0,42,255:20,0 chr1 19184080 . G . PASS END=19184101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,62,255:22,0 chr1 19184102 . T . PASS END=19184114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:18:0,46,706:0,46,255:20,0 chr1 19184115 . T . PASS END=19184116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 19184117 . A . PASS END=19184117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 19184118 . C . PASS END=19184123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 19184124 . A . PASS END=19184124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 19184125 . C . PASS END=19184125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 19185973 . T . PASS END=19185973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 19185974 . C . PASS END=19186091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:31:0,84,1128:0,84,255:40,0 chr1 19186092 . C . PASS END=19186117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,101,1433:0,101,255:40,0 chr1 19186118 . A . PASS END=19186118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:35,0 chr1 19186119 . G . PASS END=19186128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1449:0,101,255:36,0 chr1 19186129 . G C, 160.43 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,18,0:0,20,0:110:198,113,0,298,298,298:255,114,0:0,0:1.6043e+02,1.1043e+02,0.0000e+00,2.9520e+02,3.2997e+02,2.9821e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,12,26:0,0,20,18 chr1 19186130 . A . PASS END=19186145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,81,255:35,0 chr1 19186146 . G . PASS END=19186147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 19186148 . G . PASS END=19186153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 19186154 . T . PASS END=19186154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 19198140 . T . PASS END=19198140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19198142 . G . PASS END=19198142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19198157 . C . PASS END=19198157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 19198166 . G . PASS END=19198166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 19198187 . C . PASS END=19198187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19198298 . C . PASS END=19198299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 19198395 . G . PASS END=19198395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19198439 . C . PASS END=19198439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19198563 . G . PASS END=19198563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 19198620 . G . PASS END=19198620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19198628 . G . PASS END=19198628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 19198649 . C . PASS END=19198649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,96,255:21,0 chr1 19198693 . C . PASS END=19198693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 19198875 . C . PASS END=19198875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 19198972 . G . PASS END=19198972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19199067 . G . PASS END=19199067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 19199116 . C . PASS END=19199116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19199129 . G . PASS END=19199129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 19199150 . C . PASS END=19199150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 19199217 . A . PASS END=19199217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 19199320 . G . PASS END=19199320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19199326 . G . PASS END=19199326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19199330 . G . PASS END=19199330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 19199339 . T . PASS END=19199341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 19199342 . C . PASS END=19199343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 19199344 . G . PASS END=19199344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19199345 . C . PASS END=19199345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 19199346 . A . PASS END=19199348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 19199349 . T . PASS END=19199349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 19199350 . A . PASS END=19199355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 19199356 . A . PASS END=19199356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 19199357 . G . PASS END=19199374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 19199375 . C . PASS END=19199375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 19199376 . T . PASS END=19199386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:25,0 chr1 19199387 . C . PASS END=19199387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 19199388 . T . PASS END=19199395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:25,0 chr1 19199396 . C . PASS END=19199396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 19199397 . T . PASS END=19199427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 19199428 . G . PASS END=19199429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,814:0,53,255:19,0 chr1 19199430 . C . PASS END=19199430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19199431 . C . PASS END=19199435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 19199436 . G . PASS END=19199451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:18,0 chr1 19199456 . G . PASS END=19199456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 19200957 . C . PASS END=19200957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 19200958 . A . PASS END=19200959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19200960 . A . PASS END=19201075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1070:0,84,255:40,0 chr1 19201861 . G . PASS END=19201861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 19201876 . T . PASS END=19201879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:30,0 chr1 19201880 . C . PASS END=19201880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:29,0 chr1 19201881 . C . PASS END=19201881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:29,0 chr1 19201882 . T . PASS END=19201882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 19201883 . G . PASS END=19201884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 19201885 . G . PASS END=19201918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:30:0,85,1133:0,85,255:40,0 chr1 19201919 . T . PASS END=19201955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1404:0,101,255:40,0 chr1 19201956 . A G, 164.38 PASS DP=39;MQ=248.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,23,0:0,16,0:114:202,117,0,1512,117,1512:255,117,0:0,0:1.6438e+02,1.1438e+02,0.0000e+00,4.5000e+02,1.4915e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,17:0,0,24,15 chr1 19201957 . T . PASS END=19201985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,89,255:36,0 chr1 19201986 . C . PASS END=19201986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:26,0 chr1 19201987 . C . PASS END=19201993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 19201994 . T . PASS END=19201994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 19201995 . C . PASS END=19201995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19201996 . T . PASS END=19201997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 19202809 . C . PASS END=19202818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 19202819 . A . PASS END=19202829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,484:0,42,255:16,0 chr1 19202830 . A . PASS END=19202830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 19202831 . G . PASS END=19202846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 19202847 . C . PASS END=19202848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 19202849 . A . PASS END=19202849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 19202850 . T . PASS END=19202858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:25,0 chr1 19202859 . C . PASS END=19202881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,917:0,62,255:26,0 chr1 19202882 . T . PASS END=19202882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:22,0 chr1 19202883 . C . PASS END=19202895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:24,0 chr1 19202896 . G A, 118.79 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:69:157,72,0,901,72,901:255,75,0:0,0:1.1879e+02,6.8785e+01,5.1772e-07,4.5000e+02,1.0356e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,16:0,0,15,9 chr1 19202897 . G . PASS END=19202899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 19202900 . A . PASS END=19202900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:21,0 chr1 19202901 . G . PASS END=19202902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 19202903 . A . PASS END=19202903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:19,0 chr1 19202904 . T . PASS END=19202908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 19202909 . A . PASS END=19202909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:21,0 chr1 19202910 . G . PASS END=19202914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 19202915 . G . PASS END=19202916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 19202917 . T C, 105.27 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,21,0:1.000,0.000:21:0,9,0:0,12,0:55:143,58,0,243,243,243:255,66,0:0,0:1.0527e+02,5.5271e+01,1.2943e-05,2.4004e+02,2.7481e+02,2.4305e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,11:0,0,12,9:19202917 chr1 19202918 . G . PASS END=19202925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:21:0,42,630:0,49,255:19,0 chr1 19202926 . T C, 105.27 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,21,0:1.000,0.000:21:0,9,0:0,12,0:55:143,58,0,243,243,243:255,66,0:0,0:1.0527e+02,5.5270e+01,1.2943e-05,2.4004e+02,2.7481e+02,2.4305e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,11:0,0,12,9:19202917 chr1 19202927 . G . PASS END=19202932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:15,0 chr1 19202933 . T . PASS END=19202933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 19202934 . C . PASS END=19202935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:15,0 chr1 19202936 . A . PASS END=19202936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 19202937 . G . PASS END=19202939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19202940 . A . PASS END=19202940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 19202941 . C . PASS END=19202956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 19202957 . A . PASS END=19202957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 19202958 . A . PASS END=19202958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:11,0 chr1 19202959 . G . PASS END=19202961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 19202972 . C . PASS END=19202972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 19203692 . C . PASS END=19203692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 19203702 . C . PASS END=19203714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:30,0 chr1 19203715 . A . PASS END=19203715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 19203716 . C . PASS END=19203749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1078:0,90,255:31,0 chr1 19203910 . G . PASS END=19203918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 19203919 . T . PASS END=19203919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 19203920 . T . PASS END=19203952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,521:0,42,255:15,0 chr1 19203953 . T . PASS END=19203953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 19203954 . T . PASS END=19203959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 19203960 . G . PASS END=19203961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 19203962 . G . PASS END=19203964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 19203965 . C . PASS END=19203976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 19203977 . G . PASS END=19203977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 19203978 . G . PASS END=19203978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 19203979 . C . PASS END=19203980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,559:0,34,255:17,0 chr1 19203981 . C . PASS END=19203991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:53:18:0,53,526:0,53,255:18,0 chr1 19203992 . G . PASS END=19203992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:16,0 chr1 19203993 . A . PASS END=19203996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,690:0,54,255:18,0 chr1 19203997 . C G, 107.19 PASS DP=20;MQ=246.03;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,15,0:0,5,0:57:145,60,0,757,60,757:255,60,0:0,0:1.0719e+02,5.7188e+01,8.2835e-06,4.5000e+02,9.1958e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,13:0,0,10,10 chr1 19203998 . G . PASS END=19204034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 19204035 . G . PASS END=19204065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 19204066 . G . PASS END=19204066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 19204067 . G . PASS END=19204069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 19204070 . G . PASS END=19204070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 19204071 . A . PASS END=19204077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 19204078 . C . PASS END=19204080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19204081 . G . PASS END=19204081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 19204082 . A . PASS END=19204084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19204085 . T . PASS END=19204085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 19204086 . G . PASS END=19204090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 19204091 . T . PASS END=19204091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 19204092 . T . PASS END=19204092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,527:0,45,255:15,0 chr1 19204093 . C . PASS END=19204093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 19204094 . T . PASS END=19204094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 19204095 . T . PASS END=19204095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 19204096 . T . PASS END=19204098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 19204099 . G . PASS END=19204100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 19204101 . C . PASS END=19204101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 19204102 . G . PASS END=19204103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 19204104 . A . PASS END=19204104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,466:0,14,255:11,0 chr1 19204105 . C . PASS END=19204105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 19204106 . T . PASS END=19204106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:8,0 chr1 19205794 . C . PASS END=19205796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 19205797 . C . PASS END=19205797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 19205798 . A . PASS END=19205865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,551:0,41,255:19,0 chr1 19205866 . T . PASS END=19205866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr1 19205867 . G . PASS END=19205867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 19208193 . C . PASS END=19208196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 19208197 . A . PASS END=19208355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1260:0,93,255:40,0 chr1 19208356 . C . PASS END=19208359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,1080:0,74,255:26,0 chr1 19208360 . G . PASS END=19208360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:24,0 chr1 19208361 . C . PASS END=19208365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:24,0 chr1 19208366 . A . PASS END=19208381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 19209605 . G . PASS END=19209630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 19209631 . G . PASS END=19209631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 19209632 . C . PASS END=19209687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 19209688 . A . PASS END=19209689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 19209690 . G . PASS END=19209692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 19209773 . C . PASS END=19209798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:15:0,41,543:0,41,255:19,0 chr1 19209799 . T . PASS END=19209799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 19209800 . G . PASS END=19209800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 19209801 . G . PASS END=19209801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 19209802 . T . PASS END=19209815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 19209816 . C . PASS END=19209835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 19209836 . C . PASS END=19209837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 19209838 . G . PASS END=19209839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 19209840 . T . PASS END=19209840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,676:0,11,255:19,0 chr1 19209841 . C . PASS END=19209869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,922:0,62,255:26,0 chr1 19209870 . A . PASS END=19209870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,813:0,58,255:23,0 chr1 19209871 . A . PASS END=19209871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 19209872 . G . PASS END=19209872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 19209873 . T . PASS END=19209876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 19209877 . T . PASS END=19209877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 19209878 . G . PASS END=19209893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:25,0 chr1 19209894 . T . PASS END=19209894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 19209895 . C . PASS END=19209897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 19209898 . T . PASS END=19209898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,815:0,44,255:23,0 chr1 19209899 . C . PASS END=19209901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 19209902 . C . PASS END=19209902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:22,0 chr1 19209903 . G . PASS END=19209908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 19209909 . A . PASS END=19209909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 19209910 . T . PASS END=19209911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 19209912 . A . PASS END=19209922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,717:0,52,255:18,0 chr1 19211967 . C . PASS END=19211967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 19211968 . T . LowGQ END=19211969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,5:18:0:17:0,0,399:0,0,255:14,0 chr1 19211970 . T . PASS END=19211971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:13,0 chr1 19211972 . C . PASS END=19211972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 19211973 . C . PASS END=19211973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 19211974 . A . LowGQ END=19211974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,341:104,0,255:13,0 chr1 19211975 . C . PASS END=19211976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 19211977 . A . LowGQ END=19211978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:17:0,0,407:0,0,255:15,0 chr1 19211979 . G . PASS END=19211979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:16,0 chr1 19211980 . G . PASS END=19211980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 19211981 . T . LowGQ END=19211981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,460:26,0,255:16,0 chr1 19211982 . C . PASS END=19211982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,640:0,13,255:18,0 chr1 19211983 . T . PASS END=19211983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,605:0,30,255:18,0 chr1 19211984 . T . PASS END=19211984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 19211985 . G . PASS END=19211985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,618:0,13,255:18,0 chr1 19211986 . G . PASS END=19211986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 19211987 . C . LowGQ END=19211987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,643:28,0,255:19,0 chr1 19211988 . G . PASS END=19211988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 19211989 . A . LowGQ END=19211989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,657:6,0,255:19,0 chr1 19211990 . G . PASS END=19211991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:22:0,41,753:0,41,255:22,0 chr1 19211992 . A . PASS END=19211992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,742:0,22,255:21,0 chr1 19211993 . T . PASS END=19211993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,726:0,58,255:24,0 chr1 19211994 . C . PASS END=19211994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr1 19211995 . T . PASS END=19211995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 19211996 . C . PASS END=19211996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 19211997 . A . PASS END=19211997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:8:25:0,8,599:0,8,255:21,0 chr1 19211998 . G . PASS END=19211998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:24,0 chr1 19211999 . C . PASS END=19211999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr1 19212000 . C . PASS END=19212000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19212001 . C . PASS END=19212001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 19212002 . T . PASS END=19212004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:26,0 chr1 19212005 . G . PASS END=19212005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 19212006 . C . PASS END=19212006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 19212007 . G . PASS END=19212008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:28,0 chr1 19212009 . C . PASS END=19212009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:27,0 chr1 19212010 . C . PASS END=19212011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19212012 . A . PASS END=19212012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:27,0 chr1 19212013 . C . PASS END=19212013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19212014 . T . PASS END=19212016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 19212017 . G . PASS END=19212018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19212019 . A . PASS END=19212019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr1 19212020 . T . PASS END=19212021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:27,0 chr1 19212022 . T . PASS END=19212022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19212023 . C . PASS END=19212023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 19212024 . T . PASS END=19212024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19212025 . G . PASS END=19212026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1008:0,68,255:27,0 chr1 19212027 . C . PASS END=19212027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19212028 . G . PASS END=19212028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 19212029 . C . PASS END=19212029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19212030 . C . PASS END=19212033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 19212034 . A . PASS END=19212047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:32,0 chr1 19212048 . C . PASS END=19212048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 19212049 . C . PASS END=19212088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1097:0,82,255:32,0 chr1 19212089 . C . PASS END=19212089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 19212090 . C . PASS END=19212093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 19212094 . G . PASS END=19212094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 19212095 . C . PASS END=19212095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 19212096 . A . PASS END=19212099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 19212100 . T . PASS END=19212100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr1 19212101 . C . PASS END=19212103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 19212104 . T . PASS END=19212104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:25,0 chr1 19212105 . G . PASS END=19212117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,901:0,62,255:26,0 chr1 19212118 . A . PASS END=19212123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:19,0 chr1 19212136 . G . PASS END=19212136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 19212958 . C . PASS END=19213005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,146,255:40,0 chr1 19213011 . A . PASS END=19213011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,100,1745:0,100,255:40,0 chr1 19215856 . C . PASS END=19215871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:41:0,82,1498:0,82,255:40,0 chr1 19215872 . A . PASS END=19215948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:46:0,110,1603:0,110,255:40,0 chr1 19215962 . C . PASS END=19215962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:43:0,90,1350:0,129,255:30,0 chr1 19216506 . C . PASS END=19216507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 19216508 . T . PASS END=19216508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 19216509 . T . PASS END=19216517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:15,0 chr1 19216518 . A . PASS END=19216518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 19216519 . T . PASS END=19216519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr1 19216520 . C . PASS END=19216527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:17,0 chr1 19216528 . G . PASS END=19216532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 19216533 . G . PASS END=19216533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 19216534 . C . PASS END=19216542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:24,0 chr1 19216543 . A . PASS END=19216543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:22,0 chr1 19216544 . A . PASS END=19216546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 19216547 . C . PASS END=19216548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 19216549 . A . PASS END=19216552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 19216553 . C . PASS END=19216553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 19216554 . G . PASS END=19216577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,900:0,72,255:26,0 chr1 19216578 . G . PASS END=19216578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 19216579 . G . PASS END=19216594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 19216595 . G . PASS END=19216599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:18,0 chr1 19228956 . C . PASS END=19228964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 19228965 . G . PASS END=19228967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19228968 . C . PASS END=19228968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 19228969 . A . PASS END=19229017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:28:0,80,1215:0,80,255:40,0 chr1 19229041 . C . PASS END=19229041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 19229043 . C . PASS END=19229043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 19229054 . G . PASS END=19229054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 19229056 . C . PASS END=19229056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 19229082 . C . PASS END=19229082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 19229090 . G . PASS END=19229090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,99,1582:0,99,255:37,0 chr1 19229185 . T . PASS END=19229185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 19235055 . T . PASS END=19235160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,117,1800:0,117,255:40,0 chr1 19236836 . C . PASS END=19236848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:25,0 chr1 19236849 . C . PASS END=19236849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 19236850 . T . PASS END=19236868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,828:0,75,255:26,0 chr1 19236869 . G . PASS END=19236917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:33,0 chr1 19236918 . A . PASS END=19236918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 19236919 . C . PASS END=19236919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19236920 . T . PASS END=19236937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr1 19236938 . A . PASS END=19236938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 19236939 . T . PASS END=19236942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 19236943 . A . PASS END=19236943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 19236944 . C . PASS END=19236962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,876:0,69,255:23,0 chr1 19236963 . C . PASS END=19236966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 19237878 . C . PASS END=19237958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:38:0,92,1368:0,92,255:40,0 chr1 19237959 . G . PASS END=19237970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,105,1485:0,105,255:39,0 chr1 19238457 . C . PASS END=19238577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:39:0,104,1590:0,104,255:40,0 chr1 19243397 . A . PASS END=19243489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,101,1373:0,101,255:40,0 chr1 19243490 . A . PASS END=19243490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1158:0,67,255:33,0 chr1 19243491 . T . PASS END=19243511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,81,255:36,0 chr1 19243512 . T . PASS END=19243512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1201:0,78,255:26,0 chr1 19243513 . A . PASS END=19243518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:31:0,84,1260:0,89,255:30,0 chr1 19243519 . T . PASS END=19243536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 19244856 . C . PASS END=19244864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,923:0,67,255:26,0 chr1 19244865 . C . PASS END=19244865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 19244866 . T . PASS END=19244883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:30,0 chr1 19244884 . T . PASS END=19244884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 19244885 . T . PASS END=19244948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:89:31:0,89,1189:0,89,255:38,0 chr1 19244949 . C . PASS END=19244949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:22:40:0,22,1037:0,22,255:32,0 chr1 19244950 . A . PASS END=19244951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1189:0,86,255:35,0 chr1 19244952 . C . PASS END=19244952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1133:0,50,255:32,0 chr1 19244953 . T . PASS END=19244967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,100,1288:0,100,255:37,0 chr1 19244968 . T . PASS END=19244968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:35,0 chr1 19244969 . G . PASS END=19244992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1230:0,92,255:37,0 chr1 19244993 . T . PASS END=19244993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:29,0 chr1 19244994 . G . PASS END=19244996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 19246172 . G . PASS END=19246175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 19246176 . C . PASS END=19246190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:26,0 chr1 19246191 . A . PASS END=19246192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 19246193 . C . PASS END=19246194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19246195 . C . PASS END=19246200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19246201 . G . PASS END=19246201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 19246202 . C . PASS END=19246202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19246203 . T . PASS END=19246228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,923:0,68,255:26,0 chr1 19246229 . A . PASS END=19246230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 19246231 . T . PASS END=19246245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 19246246 . T . PASS END=19246248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 19246249 . C . PASS END=19246252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 19246253 . A . PASS END=19246264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,43,255:18,0 chr1 19246265 . T . LowGQ END=19246265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,537:21,0,255:13,0 chr1 19246266 . G . PASS END=19246267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:12,0 chr1 19247555 . C . PASS END=19247560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr1 19247561 . C . PASS END=19247561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 19247562 . A . PASS END=19247562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 19247563 . G . PASS END=19247563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 19247564 . C . PASS END=19247575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1047:0,80,255:31,0 chr1 19247576 . G . PASS END=19247576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:28,0 chr1 19247577 . G . PASS END=19247615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1133:0,80,255:34,0 chr1 19282162 . C . PASS END=19282164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 19282165 . C . PASS END=19282196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:5,0 chr1 19282197 . G . PASS END=19282203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 19282204 . A . PASS END=19282244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 19282245 . C . PASS END=19282300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,219:0,21,219:9,0 chr1 19282301 . C . PASS END=19282301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 19282302 . C . PASS END=19282320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:8,0 chr1 19282321 . C . PASS END=19282326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,243:6,0 chr1 19282327 . A . PASS END=19282327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 19282328 . C . PASS END=19282384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 19282385 . C . PASS END=19282395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,149:3,0 chr1 19282396 . G . PASS END=19282396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 19282397 . G . PASS END=19282416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:3:4:0,3,45:0,12,133:3,0 chr1 19282417 . G . PASS END=19282441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 19282442 . C . PASS END=19282446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 19282447 . C . PASS END=19282447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 19282448 . T . PASS END=19282494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 19282495 . G . PASS END=19282503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:12,0 chr1 19282504 . T . PASS END=19282504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 19282505 . G . PASS END=19282550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 19282551 . G . PASS END=19282551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 19282552 . C . PASS END=19282561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 19282562 . G . PASS END=19282562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 19282563 . C . PASS END=19282565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 19282566 . C . LowGQ END=19282566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,402:0,0,255:12,0 chr1 19282567 . T . PASS END=19282567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 19282568 . G . PASS END=19282568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 19282569 . C . PASS END=19282570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 19282571 . C . PASS END=19282571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 19282572 . C . PASS END=19282573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 19282574 . G . PASS END=19282574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 19282575 . C . PASS END=19282575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 19282576 . T . PASS END=19282576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,372:0,9,255:12,0 chr1 19282577 . G . PASS END=19282580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr1 19282581 . C . PASS END=19282581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,437:0,6,255:14,0 chr1 19282582 . T . PASS END=19282586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 19282587 . C . PASS END=19282587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 19282588 . A . PASS END=19282592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 19282593 . G . PASS END=19282593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 19282594 . T . PASS END=19282596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 19282597 . C . PASS END=19282597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 19282598 . G . PASS END=19282602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 19282603 . T . PASS END=19282603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 19282604 . C . PASS END=19282606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 19282607 . G . PASS END=19282607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 19282608 . C . PASS END=19282623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:18,0 chr1 19282624 . A . PASS END=19282624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 19282625 . G . PASS END=19282630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 19282631 . A . PASS END=19282631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 19282632 . G . PASS END=19282637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:18,0 chr1 19282638 . G . PASS END=19282638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 19282639 . C . PASS END=19282639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 19282640 . G . PASS END=19282640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:15,0 chr1 19282641 . C . PASS END=19282641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 19282642 . A . PASS END=19282642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 19282643 . C . PASS END=19282643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 19282644 . G . PASS END=19282645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 19282646 . T . PASS END=19282646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 19282647 . G . PASS END=19282647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 19282648 . A . PASS END=19282661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:16,0 chr1 19282662 . G . PASS END=19282662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 19282663 . T . PASS END=19282668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 19282669 . T . PASS END=19282670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 19282671 . G . PASS END=19282681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 19282682 . C . PASS END=19282682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 19282683 . G . PASS END=19282694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 19282695 . C . PASS END=19282696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 19282697 . C . PASS END=19282697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 19282698 . C . PASS END=19282704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 19282705 . G . PASS END=19282722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:6:0,12,180:0,18,188:6,0 chr1 19282723 . G . PASS END=19282723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:3,0 chr1 19282724 . C . PASS END=19282730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 19282731 . G . PASS END=19282758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:2:0,3,45:0,6,70:3,0 chr1 19282759 . C . PASS END=19282800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 19282801 . T . PASS END=19282826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 19401326 . T . PASS END=19401362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1297:0,87,255:40,0 chr1 19401363 . T . PASS END=19401363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:33,0 chr1 19401364 . C . PASS END=19401390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1349:0,108,255:36,0 chr1 19403234 . C . PASS END=19403238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,900:0,62,255:26,0 chr1 19403239 . A . PASS END=19403239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 19403240 . C . PASS END=19403240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 19403241 . A . PASS END=19403241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:32:27:0,32,865:0,32,255:24,0 chr1 19403242 . T . PASS END=19403242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 19403243 . C . PASS END=19403243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 19403244 . G . PASS END=19403246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,975:0,87,255:29,0 chr1 19403247 . G . PASS END=19403247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 19403248 . A . PASS END=19403248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 19403249 . A . PASS END=19403250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 19403251 . T . PASS END=19403254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1094:0,90,255:31,0 chr1 19403255 . A . PASS END=19403255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 19403256 . G . PASS END=19403256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 19403257 . A . PASS END=19403257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr1 19403258 . A . PASS END=19403380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1260:0,92,255:40,0 chr1 19403381 . T . PASS END=19403389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:29:0,78,1170:0,87,255:26,0 chr1 19403390 . G . PASS END=19403390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19403391 . C . PASS END=19403396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 19404470 . C . PASS END=19404560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,103,1390:0,103,255:40,0 chr1 19407843 . C . PASS END=19407855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:13,0 chr1 19407856 . C . PASS END=19407856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 19407857 . T . PASS END=19407858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 19407859 . G . PASS END=19407881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:18,0 chr1 19407882 . G . PASS END=19407899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,698:0,66,255:22,0 chr1 19407900 . A . PASS END=19407900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 19407901 . A . PASS END=19407902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 19407903 . A . PASS END=19407903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,626:0,49,255:21,0 chr1 19407904 . T . PASS END=19407916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:23,0 chr1 19407917 . G . PASS END=19407917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:20,0 chr1 19407918 . G . PASS END=19407922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:24,0 chr1 19407923 . C . PASS END=19407928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,996:0,84,255:28,0 chr1 19407929 . C . PASS END=19407929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 19407930 . T . PASS END=19407932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 19407933 . G . PASS END=19407968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 19407969 . T . PASS END=19407969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr1 19407970 . A . PASS END=19407972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 19407973 . G . PASS END=19407973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:23,0 chr1 19407974 . C . PASS END=19407977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:25,0 chr1 19407978 . T . PASS END=19407978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:24,0 chr1 19407979 . C . PASS END=19407992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,820:0,62,255:26,0 chr1 19407993 . C . PASS END=19407993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19407994 . T . PASS END=19407994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:26,0 chr1 19407995 . C . PASS END=19407997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19407998 . C . PASS END=19408034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:26,0 chr1 19408035 . A . PASS END=19408053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1091:0,80,255:32,0 chr1 19408054 . A . PASS END=19408054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 19408055 . A . PASS END=19408071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr1 19408072 . A . PASS END=19408072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:28,0 chr1 19408073 . A . PASS END=19408077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1140:0,93,255:31,0 chr1 19408078 . A . PASS END=19408078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 19408079 . G . PASS END=19408083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 19408084 . A . PASS END=19408087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 19408088 . T . PASS END=19408088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1170:0,93,255:31,0 chr1 19408089 . A . PASS END=19408089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1023:0,46,255:28,0 chr1 19408090 . A . PASS END=19408090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 19408091 . A . PASS END=19408091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:29,0 chr1 19408092 . A . PASS END=19408094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 19408095 . A . PASS END=19408095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 19408096 . A . PASS END=19408098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 19408099 . C . PASS END=19408100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 19408101 . G . PASS END=19408126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:34:0,80,1296:0,80,255:36,0 chr1 19408127 . A . PASS END=19408127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:34,0 chr1 19408128 . G . PASS END=19408183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1125:0,80,255:36,0 chr1 19408184 . T . PASS END=19408207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 19408208 . T . PASS END=19408208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 19408209 . T . PASS END=19408231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,856:0,65,255:26,0 chr1 19408232 . G . PASS END=19408239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 19408240 . A . PASS END=19408271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:22:0,62,937:0,62,255:26,0 chr1 19408272 . C . PASS END=19408272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 19408273 . G . PASS END=19408275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:24,0 chr1 19408276 . A . PASS END=19408276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 19408277 . T . PASS END=19408277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19408278 . C . PASS END=19408278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 19408279 . T . PASS END=19408283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19408284 . T . PASS END=19408284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:20,0 chr1 19408285 . T . PASS END=19408298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 19408299 . A . PASS END=19408300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr1 19410998 . G . PASS END=19411008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 19411009 . G . PASS END=19411009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 19411010 . T . PASS END=19411025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,726:0,69,255:26,0 chr1 19411026 . T . PASS END=19411045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:31,0 chr1 19411046 . A . PASS END=19411047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 19411048 . G . PASS END=19411120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1014:0,80,255:34,0 chr1 19411121 . T . PASS END=19411121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1038:0,79,255:29,0 chr1 19411122 . T . PASS END=19411139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:31,0 chr1 19411140 . G . PASS END=19411140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 19411141 . C . PASS END=19411155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:31,0 chr1 19411156 . C . PASS END=19411164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:27,0 chr1 19411165 . T . PASS END=19411165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:23,0 chr1 19411166 . G . PASS END=19411170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:24,0 chr1 19411171 . T . PASS END=19411171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:23,0 chr1 19411172 . T . PASS END=19411176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 19411177 . G . PASS END=19411178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,875:0,56,255:23,0 chr1 19411179 . G . PASS END=19411181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19411182 . A . PASS END=19411182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:20,0 chr1 19411183 . A . PASS END=19411183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 19411184 . G . PASS END=19411192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,56,255:19,0 chr1 19412639 . C . PASS END=19412644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:23,0 chr1 19412645 . A . PASS END=19412645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 19412646 . A . PASS END=19412649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 19412650 . A . PASS END=19412652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 19412653 . G . PASS END=19412654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 19412655 . C . PASS END=19412655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 19412656 . A . PASS END=19412671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 19412672 . A . PASS END=19412672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 19412673 . C . PASS END=19412696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:25,0 chr1 19412697 . G . PASS END=19412697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 19412698 . C . PASS END=19412698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 19412699 . C . PASS END=19412699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 19412700 . C . PASS END=19412700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19412701 . G . PASS END=19412701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 19412702 . T . PASS END=19412709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 19412710 . G . PASS END=19412710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 19412711 . G . PASS END=19412724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:24,0 chr1 19412725 . C . PASS END=19412725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 19412726 . A . PASS END=19412727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 19412728 . G . PASS END=19412728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:19,0 chr1 19412729 . G . PASS END=19412731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 19412732 . G . PASS END=19412741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,47,255:16,0 chr1 19412742 . A . PASS END=19412756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 19412757 . G . PASS END=19412757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 19412758 . A . PASS END=19412758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 19412759 . G . LowGQ END=19412759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,396:24,0,255:13,0 chr1 19412760 . C . PASS END=19412760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 19412761 . C . LowGQ END=19412761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,382:25,0,255:12,0 chr1 19412762 . A . PASS END=19412762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 19412763 . A . LowGQ END=19412763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,385:5,0,255:11,0 chr1 19412764 . C . PASS END=19412764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:13,0 chr1 19413173 . C . PASS END=19413197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1311:0,92,255:40,0 chr1 19413198 . A . PASS END=19413198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1368:0,46,255:38,0 chr1 19413199 . G . PASS END=19413309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,96,255:40,0 chr1 19413310 . T . PASS END=19413315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:33:0,66,990:0,99,255:26,0 chr1 19414310 . C . PASS END=19414310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 19414311 . T . PASS END=19414311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 19414312 . G . PASS END=19414400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1041:0,83,255:40,0 chr1 19414401 . A . PASS END=19414409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1039:0,71,255:26,0 chr1 19414410 . C . PASS END=19414418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 19414419 . T . PASS END=19414423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 19415253 . C . PASS END=19415257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:18,0 chr1 19415258 . T . PASS END=19415262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 19415263 . A . PASS END=19415263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 19415264 . G . PASS END=19415268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:23,0 chr1 19415269 . C . PASS END=19415269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 19415270 . C . PASS END=19415288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,853:0,65,255:26,0 chr1 19415289 . T . PASS END=19415289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19415290 . G . PASS END=19415290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 19415291 . C . PASS END=19415320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:28:0,82,1017:0,82,255:33,0 chr1 19415321 . T . PASS END=19415321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,967:0,65,255:25,0 chr1 19415322 . C . PASS END=19415322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 19415323 . T . PASS END=19415323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 19415324 . C . PASS END=19415324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 19415325 . C . PASS END=19415325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:26,0 chr1 19415326 . C . PASS END=19415346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1019:0,87,255:29,0 chr1 19415347 . T . PASS END=19415349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 19415350 . T . PASS END=19415402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,86,255:37,0 chr1 19415403 . A . PASS END=19415403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1310:0,67,255:29,0 chr1 19415404 . A . PASS END=19415405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:30,0 chr1 19415406 . G . PASS END=19415407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr1 19415408 . C . PASS END=19415409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,92,255:27,0 chr1 19415410 . T . PASS END=19415415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 19415416 . C . PASS END=19415418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19415419 . G . PASS END=19415430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,74,255:25,0 chr1 19415431 . A . PASS END=19415431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 19415432 . G . PASS END=19415451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 19415452 . G . PASS END=19415452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 19415453 . A . PASS END=19415453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19415454 . A . PASS END=19415454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 19415455 . T . PASS END=19415461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19415462 . C . PASS END=19415462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 19415463 . A . PASS END=19415471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 19419313 . C . PASS END=19419322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 19419323 . G . PASS END=19419324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19419325 . G . PASS END=19419349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1151:0,80,255:32,0 chr1 19419350 . A . PASS END=19419350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 19419351 . G . PASS END=19419362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:33,0 chr1 19419363 . A . PASS END=19419363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,955:0,68,255:28,0 chr1 19419364 . T . PASS END=19419365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 19419366 . G . PASS END=19419366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:27,0 chr1 19419367 . C . PASS END=19419370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:28,0 chr1 19419371 . G . PASS END=19419371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 19419372 . C . PASS END=19419375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 19419376 . G . PASS END=19419376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr1 19419377 . C . PASS END=19419382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 19419383 . A . PASS END=19419383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,898:0,37,255:26,0 chr1 19419384 . A . PASS END=19419387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 19419388 . C . PASS END=19419389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1013:0,71,255:27,0 chr1 19419390 . T . PASS END=19419392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19419393 . T . PASS END=19419404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 19419405 . C . PASS END=19419405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 19419406 . A . PASS END=19419412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,805:0,64,255:26,0 chr1 19419807 . T . PASS END=19419976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:34:0,84,1260:0,89,255:40,0 chr1 19419977 . A . PASS END=19419980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,1062:0,63,255:26,0 chr1 19420443 . T . PASS END=19420448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 19420449 . A . PASS END=19420475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,707:0,60,255:24,0 chr1 19420476 . A . PASS END=19420495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr1 19420496 . C . PASS END=19420496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 19420497 . A . PASS END=19420512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:31,0 chr1 19420513 . G . PASS END=19420513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1099:0,77,255:29,0 chr1 19420514 . G . PASS END=19420517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1249:0,89,255:34,0 chr1 19420518 . G . PASS END=19420518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 19420519 . G . PASS END=19420612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:36:0,95,1163:0,95,255:40,0 chr1 19420613 . A . PASS END=19420613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:35,0 chr1 19420614 . C . PASS END=19420633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:33:0,91,1266:0,91,255:37,0 chr1 19421400 . C . PASS END=19421519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:90:30:0,90,1074:0,90,255:40,0 chr1 19422039 . C . PASS END=19422146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:54:0,120,1800:0,162,255:40,0 chr1 19423017 . T . PASS END=19423020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 19423021 . A . PASS END=19423021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 19423022 . G . PASS END=19423039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,923:0,62,255:26,0 chr1 19423040 . T . PASS END=19423040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 19423041 . G . PASS END=19423044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr1 19423045 . T . PASS END=19423107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,918:0,81,255:32,0 chr1 19423108 . G . PASS END=19423127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,984:0,68,255:26,0 chr1 19423128 . T . PASS END=19423129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:21,0 chr1 19423130 . C . PASS END=19423130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 19423131 . A . PASS END=19423131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,1 chr1 19423132 . T . PASS END=19423132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:21:24:0,21,755:0,21,255:21,1 chr1 19423133 . C . PASS END=19423135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,764:0,33,255:22,1 chr1 19423136 . C . PASS END=19423143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 19423144 . T . PASS END=19423144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 19423687 . C . PASS END=19423774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,104,1465:0,104,255:40,0 chr1 19426091 . C . PASS END=19426171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:94:38:0,94,1440:0,94,255:40,0 chr1 19426870 . C . PASS END=19426906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1141:0,83,255:33,0 chr1 19426907 . T . PASS END=19426907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr1 19426908 . C . PASS END=19426920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:32,0 chr1 19426921 . A . PASS END=19426921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 19426922 . A . PASS END=19426922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1097:0,96,255:32,0 chr1 19426923 . T . PASS END=19426923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 19426924 . C . PASS END=19426930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1178:0,96,255:32,0 chr1 19426931 . T . PASS END=19426931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:28,0 chr1 19426932 . T . PASS END=19427027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1142:0,80,255:33,0 chr1 19427028 . T . PASS END=19427028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,954:0,46,255:25,0 chr1 19427029 . C . PASS END=19427031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 19427032 . C . PASS END=19427067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:25,0 chr1 19428014 . A . PASS END=19428124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1117:0,80,255:40,0 chr1 19428125 . T . PASS END=19428135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 19430578 . C . PASS END=19430578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19430579 . T . PASS END=19430579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 19430580 . G . PASS END=19430582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 19430583 . G . PASS END=19430619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1056:0,84,255:31,0 chr1 19430620 . T . PASS END=19430620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,900:0,76,255:30,0 chr1 19430621 . C . PASS END=19430629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 19430630 . C . PASS END=19430630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 19430631 . A . PASS END=19430635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 19430636 . G . PASS END=19430636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1078:0,57,255:28,0 chr1 19430637 . G . PASS END=19430656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1210:0,86,255:33,0 chr1 19430657 . C . PASS END=19430657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:31,0 chr1 19430658 . C . PASS END=19430664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1170:0,83,255:32,0 chr1 19430665 . A . PASS END=19430665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:29,0 chr1 19430666 . C . PASS END=19430676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1188:0,85,255:32,0 chr1 19430677 . T . PASS END=19430679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1172:0,60,255:25,0 chr1 19430680 . G . PASS END=19430680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1170:0,50,255:26,0 chr1 19430681 . C . PASS END=19430681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 19430682 . A . PASS END=19430727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,789:0,61,255:26,0 chr1 19430728 . C . PASS END=19430746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,44,255:19,0 chr1 19430747 . A . PASS END=19430748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 19430749 . G . PASS END=19430751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:14,0 chr1 19431079 . C . PASS END=19431160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,102,1530:0,115,255:40,0 chr1 19431542 . C . PASS END=19431546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1141:0,82,255:35,0 chr1 19431547 . T . PASS END=19431547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr1 19431548 . G . PASS END=19431683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:35:0,98,1299:0,98,255:40,0 chr1 19432227 . C . PASS END=19432228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19432229 . G . PASS END=19432229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,857:0,67,255:26,0 chr1 19432230 . G . PASS END=19432286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:34,0 chr1 19432287 . A . PASS END=19432287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 19432288 . T . PASS END=19432300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr1 19432301 . C . PASS END=19432336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,925:0,75,255:26,0 chr1 19433063 . T . PASS END=19433063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 19433064 . T . PASS END=19433064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 19433065 . G . PASS END=19433071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 19433072 . C . PASS END=19433105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:25,0 chr1 19433106 . G . PASS END=19433106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 19433107 . A . PASS END=19433108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 19433109 . G . PASS END=19433109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19433110 . T . PASS END=19433110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 19433111 . C . PASS END=19433111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19433112 . C . PASS END=19433112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 19433113 . T . PASS END=19433125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1178:0,90,255:31,0 chr1 19433126 . A . PASS END=19433126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:30,0 chr1 19433127 . C . PASS END=19433135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 19433136 . T . PASS END=19433136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 19433137 . G . PASS END=19433153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1161:0,80,255:35,0 chr1 19433154 . T . PASS END=19433154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:33,0 chr1 19433155 . A . PASS END=19433163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1249:0,89,255:35,0 chr1 19433164 . T . PASS END=19433164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:32,0 chr1 19433165 . C . PASS END=19433199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:30:0,82,1133:0,82,255:35,0 chr1 19433200 . C . PASS END=19433215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,931:0,67,255:26,0 chr1 19433216 . T . PASS END=19433216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:22,0 chr1 19433217 . A . PASS END=19433220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:23,0 chr1 19433331 . C . PASS END=19433334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,670:0,57,255:19,0 chr1 19433335 . G . PASS END=19433343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 19433344 . A . PASS END=19433344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 19433345 . C . PASS END=19433348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 19433349 . T . PASS END=19433349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 19433350 . C . PASS END=19433358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:24:0,67,922:0,67,255:25,0 chr1 19433359 . A . PASS END=19433359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:25,0 chr1 19433360 . T . PASS END=19433360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 19433361 . C . PASS END=19433362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1116:0,77,255:29,0 chr1 19433363 . T . PASS END=19433364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:30,0 chr1 19433365 . G . PASS END=19433365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 19433366 . G . PASS END=19433366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 19433367 . A . PASS END=19433368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 19433369 . G . PASS END=19433370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 19433371 . C . PASS END=19433371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:29,0 chr1 19433372 . T . PASS END=19433372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 19433373 . T . PASS END=19433460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1105:0,82,255:40,0 chr1 19436590 . C . PASS END=19436717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:95:41:0,95,1454:0,95,255:40,0 chr1 19436874 . C . PASS END=19436958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1272:0,84,255:40,0 chr1 19437236 . C . PASS END=19437255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 19437256 . G . PASS END=19437326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,964:0,81,255:36,0 chr1 19439018 . C . PASS END=19439018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 19439019 . G . PASS END=19439023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 19439024 . A . PASS END=19439024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 19439025 . G . PASS END=19439035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1009:0,84,255:31,0 chr1 19439036 . A . PASS END=19439036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 19439037 . G . PASS END=19439335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:30:0,81,1094:0,81,255:40,0 chr1 19439336 . A . PASS END=19439347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:24,0 chr1 19439348 . G . PASS END=19439361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:18:0,49,607:0,49,255:19,0 chr1 19440193 . C . PASS END=19440193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr1 19440194 . T . PASS END=19440194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr1 19440195 . G . PASS END=19440321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:34:0,89,1227:0,89,255:40,0 chr1 19440373 . C . PASS END=19440558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:36:0,93,1395:0,105,255:40,0 chr1 19440559 . T . PASS END=19440564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,92,255:25,0 chr1 19441305 . C . PASS END=19441322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:36:0,80,1123:0,80,255:40,0 chr1 19441323 . A . PASS END=19441323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1410:0,76,255:39,0 chr1 19441324 . T . PASS END=19441443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:92:41:0,92,1459:0,92,255:40,0 chr1 19441892 . C . PASS END=19441907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,809:0,66,255:25,0 chr1 19441908 . G . PASS END=19441915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19441916 . T . PASS END=19441916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 19441917 . T . PASS END=19441921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,987:0,87,255:30,0 chr1 19441922 . C . PASS END=19441922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 19441923 . C . PASS END=19441939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:31,0 chr1 19441940 . C . PASS END=19441940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 19441941 . C . PASS END=19442095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1117:0,80,255:37,0 chr1 19442096 . A . PASS END=19442131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,900:0,64,255:27,0 chr1 19443715 . T . PASS END=19443727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,947:0,72,255:25,0 chr1 19443728 . C . PASS END=19443878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:29:0,80,1185:0,80,255:40,0 chr1 19443879 . G . PASS END=19443879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 19443880 . T . PASS END=19443881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19443882 . C . PASS END=19443884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 19443885 . T . PASS END=19443885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:24,0 chr1 19443886 . T . PASS END=19443898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,878:0,61,255:26,0 chr1 19443899 . G . PASS END=19443899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 19443900 . C . PASS END=19443900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:19,0 chr1 19443901 . T . PASS END=19443907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:45:23:0,45,675:0,56,255:19,0 chr1 19443908 . A . PASS END=19443908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:17,0 chr1 19444317 . A . PASS END=19444404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,152,255:40,0 chr1 19445366 . T . PASS END=19445451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,143,255:40,0 chr1 19446051 . C . PASS END=19446057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 19446058 . T . PASS END=19446058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 19446059 . C . PASS END=19446061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,755:0,69,255:23,0 chr1 19446062 . T . PASS END=19446062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,685:0,39,255:22,0 chr1 19446063 . T . PASS END=19446065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr1 19446066 . T . PASS END=19446066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 19446067 . G . PASS END=19446083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:26,0 chr1 19446084 . A . PASS END=19446086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr1 19446087 . T . PASS END=19446087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 19446088 . C . PASS END=19446103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1086:0,87,255:34,0 chr1 19446104 . A . PASS END=19446104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,939:0,71,255:32,0 chr1 19446105 . C . PASS END=19446176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:33:0,81,1215:0,83,255:39,0 chr1 19446177 . T . PASS END=19446195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 19446674 . C . PASS END=19446810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:81:39:0,81,1215:0,102,255:40,0 chr1 19446811 . C . PASS END=19446838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 19446839 . T . PASS END=19446839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 19446840 . C . PASS END=19446842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 19447683 . C . PASS END=19447691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 19447692 . C . PASS END=19447704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 19447705 . T . PASS END=19447705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 19447706 . T . PASS END=19447760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:17,0 chr1 19447761 . T . PASS END=19447761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 19447762 . G . PASS END=19447839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,629:0,47,255:19,0 chr1 19447840 . G . PASS END=19447842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19447843 . C . PASS END=19447849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 19447850 . C . PASS END=19447853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 19447854 . A . PASS END=19447854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,833:0,44,255:22,0 chr1 19447855 . G . PASS END=19447914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,789:0,66,255:24,0 chr1 19447915 . G . PASS END=19447915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 19447916 . A . PASS END=19447928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 19448428 . A . PASS END=19448506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:46:0,90,1552:0,90,255:40,0 chr1 19449327 . C . PASS END=19449330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:33,0 chr1 19449331 . C . PASS END=19449331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:31,0 chr1 19449332 . T . PASS END=19449554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1115:0,80,255:40,0 chr1 19451035 . C . PASS END=19451041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1268:0,89,255:35,0 chr1 19451042 . A . PASS END=19451042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1099:0,66,255:34,0 chr1 19451043 . G . PASS END=19451164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1189:0,99,255:40,0 chr1 19451165 . A . PASS END=19451178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr1 19451179 . A . PASS END=19451184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:19,0 chr1 19452940 . C . PASS END=19452950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,814:0,63,255:26,0 chr1 19452951 . G . PASS END=19452961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:29,0 chr1 19452962 . A . PASS END=19452962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 19452963 . A . PASS END=19453041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1064:0,87,255:34,0 chr1 19453042 . T . PASS END=19453042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,887:0,48,255:27,0 chr1 19453043 . T . PASS END=19453045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19453046 . C . PASS END=19453061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,923:0,68,255:25,0 chr1 19453062 . G . PASS END=19453067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 19453068 . A . PASS END=19453068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 19453069 . T . PASS END=19453072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,948:0,84,255:28,0 chr1 19453073 . A . PASS END=19453088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,71,255:23,0 chr1 19453089 . A . PASS END=19453089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 19453090 . G . PASS END=19453094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 19453095 . C . PASS END=19453097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 19453098 . C . PASS END=19453100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 19453101 . C . PASS END=19453104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,50,255:15,0 chr1 19453105 . G . PASS END=19453105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:14,0 chr1 19453106 . C . PASS END=19453119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:15,0 chr1 19453120 . T . PASS END=19453136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,427:0,36,255:13,0 chr1 19453137 . T . PASS END=19453137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 19453138 . G . PASS END=19453144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 19453145 . G . PASS END=19453145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 19453146 . A . PASS END=19453149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 19454117 . C . PASS END=19454233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:42:0,93,1552:0,93,255:40,0 chr1 19454705 . C . PASS END=19454812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,105,1575:0,120,255:40,0 chr1 19455472 . C . PASS END=19455564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:36:0,84,1252:0,94,255:40,0 chr1 19455565 . C . PASS END=19455568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,70,255:22,0 chr1 19464501 . C . PASS END=19464517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,707:0,60,255:25,0 chr1 19464518 . A . PASS END=19464518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:23,0 chr1 19464519 . T . PASS END=19464531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,914:0,62,255:26,0 chr1 19464532 . C . PASS END=19464532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19464533 . T . PASS END=19464533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 19464534 . C . PASS END=19464536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19464537 . T . PASS END=19464537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:28,0 chr1 19464538 . C . PASS END=19464542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 19464543 . T . PASS END=19464543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1032:0,79,255:30,0 chr1 19464544 . C . PASS END=19464544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 19464545 . T . PASS END=19464545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr1 19464546 . C . PASS END=19464548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 19464549 . T . PASS END=19464549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 19464550 . C . PASS END=19464658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1150:0,80,255:37,0 chr1 19464659 . A . PASS END=19464673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr1 19464674 . T . PASS END=19464675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,853:0,56,255:19,0 chr1 19465577 . C . PASS END=19465602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1156:0,83,255:36,0 chr1 19465603 . A . PASS END=19465603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:35,0 chr1 19465604 . C . PASS END=19465690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:37:0,93,1311:0,95,255:40,0 chr1 19465691 . T . PASS END=19465691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1247:0,53,255:32,0 chr1 19465692 . G . PASS END=19465693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:67:35:0,67,1263:0,67,255:31,0 chr1 19465694 . C . PASS END=19465709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:32,0 chr1 19465710 . T . PASS END=19465715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 19465716 . T . PASS END=19465716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:25,0 chr1 19465717 . G . PASS END=19465732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,909:0,64,255:25,0 chr1 19467282 . C . PASS END=19467344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1180:0,96,255:40,0 chr1 19467345 . A . PASS END=19467378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 19467379 . G . PASS END=19467379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr1 19467380 . C . PASS END=19467386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 19467841 . C . PASS END=19467842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 19467843 . T . PASS END=19467856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 19467857 . C . PASS END=19467903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:17,0 chr1 19467904 . C . PASS END=19467904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 19467905 . A . PASS END=19467961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:18,0 chr1 19467962 . G . PASS END=19467962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 19467963 . G . PASS END=19467995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:15,0 chr1 19467996 . G . PASS END=19467997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 19467998 . C . PASS END=19467998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 19467999 . T . PASS END=19467999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 19468000 . C . PASS END=19468009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,468:0,42,255:14,0 chr1 19468010 . C . PASS END=19468010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 19468011 . G . PASS END=19468018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 19468141 . C . PASS END=19468146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19468147 . C . PASS END=19468160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1047:0,84,255:33,0 chr1 19468161 . G . PASS END=19468161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:32,0 chr1 19468162 . G . PASS END=19468260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1233:0,86,255:40,0 chr1 19468261 . A . PASS END=19468263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 19468264 . C . PASS END=19468265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19468266 . T . PASS END=19468271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:25,0 chr1 19470474 . C . PASS END=19470585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,111,1659:0,115,255:40,0 chr1 19471280 . A . PASS END=19471280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 19471281 . G . PASS END=19471282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1235:0,99,255:33,0 chr1 19471283 . A . PASS END=19471283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:32,0 chr1 19471284 . C . PASS END=19471302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1180:0,83,255:37,0 chr1 19471303 . A . PASS END=19471303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:33,0 chr1 19471304 . G . PASS END=19471396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1148:0,81,255:40,0 chr1 19471397 . T . PASS END=19471397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:26,0 chr1 19471398 . A . PASS END=19471401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 19472287 . C . PASS END=19472288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 19472289 . G . PASS END=19472290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,961:0,65,255:26,0 chr1 19472291 . A . PASS END=19472306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:37,0 chr1 19472307 . A . PASS END=19472308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:36,0 chr1 19472309 . G . PASS END=19472427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:38:0,96,1295:0,97,255:40,0 chr1 19472517 . C . PASS END=19472600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,113,1529:0,113,255:40,0 chr1 19473320 . C . PASS END=19473494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:33:0,83,1194:0,83,255:40,0 chr1 19474487 . C . PASS END=19474496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:24,0 chr1 19474497 . T . PASS END=19474499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,886:0,36,255:25,0 chr1 19474500 . T . PASS END=19474500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 19474501 . A . PASS END=19474508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 19474509 . C . PASS END=19474509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19474510 . G . PASS END=19474513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,947:0,42,255:26,0 chr1 19474514 . G . PASS END=19474514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 19474515 . G . PASS END=19474515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:27,0 chr1 19474516 . T . PASS END=19474517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:30,0 chr1 19474518 . T . PASS END=19474522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:30,0 chr1 19474523 . G . PASS END=19474523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 19474524 . C . PASS END=19474527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 19474528 . C . PASS END=19474528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 19474529 . C . PASS END=19474531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:29,0 chr1 19474532 . A . PASS END=19474532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 19474533 . A . PASS END=19474535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 19474536 . C . PASS END=19474537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1172:0,60,255:28,0 chr1 19474538 . C . PASS END=19474538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 19474539 . T . PASS END=19474539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:29,0 chr1 19474540 . T . PASS END=19474543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 19474544 . C . PASS END=19474544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:29,0 chr1 19474545 . T . PASS END=19474545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 19474546 . G . PASS END=19474591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1155:0,87,255:31,0 chr1 19474592 . C . PASS END=19474621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 19475057 . C . PASS END=19475120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,157,255:40,0 chr1 19476257 . C . PASS END=19476262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,174,255:40,0 chr1 19476263 . A . PASS END=19476289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:98:54:0,98,1800:0,98,255:40,0 chr1 19477071 . C . PASS END=19477072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 19477073 . C . PASS END=19477078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 19477079 . G . PASS END=19477079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 19477080 . A . PASS END=19477081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 19477082 . A . PASS END=19477082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:22,0 chr1 19477083 . G . PASS END=19477090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,880:0,72,255:25,0 chr1 19477091 . G . PASS END=19477104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr1 19477105 . C . PASS END=19477105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr1 19477106 . A . PASS END=19477201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:31:0,83,1202:0,83,255:40,0 chr1 19477202 . A . PASS END=19477202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:36,0 chr1 19477203 . G . PASS END=19477249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,94,255:36,0 chr1 19477250 . T . PASS END=19477250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:27,0 chr1 19477251 . A . PASS END=19477261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,87,255:28,0 chr1 19477262 . A . PASS END=19477276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 19477277 . C . PASS END=19477287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 19478137 . T . PASS END=19478334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:33:0,84,1260:0,93,255:40,0 chr1 19478335 . C . PASS END=19478344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 19478345 . G . PASS END=19478345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:24,0 chr1 19478346 . C . PASS END=19478351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr1 19478352 . G . PASS END=19478353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 19478807 . C . PASS END=19478809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 19478810 . G . PASS END=19478810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 19478811 . G . PASS END=19478816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,870:0,69,255:24,0 chr1 19478817 . G . PASS END=19478820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 19478821 . C . PASS END=19478821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 19478822 . A . PASS END=19478822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 19478823 . T . PASS END=19478823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 19478824 . A . PASS END=19478839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1131:0,80,255:33,0 chr1 19478840 . C . PASS END=19478840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr1 19478841 . A . PASS END=19478970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:34:0,85,1202:0,85,255:40,0 chr1 19479795 . T . PASS END=19479808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:21,0 chr1 19479809 . T . PASS END=19479809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 19479810 . T . PASS END=19479815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:22,0 chr1 19479816 . T . PASS END=19479816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 19479817 . T . PASS END=19479820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 19479821 . A . PASS END=19479821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 19479822 . C . PASS END=19479834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,931:0,62,255:26,0 chr1 19479835 . G . PASS END=19479996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,972:0,81,255:40,0 chr1 19480262 . C . PASS END=19480280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,823:0,62,255:26,0 chr1 19480281 . G . PASS END=19480321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1094:0,80,255:35,0 chr1 19480322 . A . PASS END=19480322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 19480323 . A . PASS END=19480327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1434:0,111,255:37,0 chr1 19480328 . C . PASS END=19480328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:36,0 chr1 19480329 . A . PASS END=19480330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1363:0,95,255:37,0 chr1 19480331 . C . PASS END=19480331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 19480332 . G . PASS END=19480448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:37:0,108,1382:0,111,255:40,0 chr1 19481412 . C . PASS END=19481413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1066:0,90,255:30,0 chr1 19481414 . T . PASS END=19481414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 19481415 . T . PASS END=19481421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 19481422 . T . PASS END=19481422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 19481423 . G . PASS END=19481424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 19481425 . T . PASS END=19481425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 19481426 . G . PASS END=19481572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1227:0,84,255:40,0 chr1 19481935 . C . PASS END=19481936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19481937 . T . PASS END=19481937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 19481938 . C . PASS END=19481965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:30,0 chr1 19481966 . T . PASS END=19481966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 19481967 . T . PASS END=19482124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1180:0,83,255:40,0 chr1 19482125 . A . PASS END=19482125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:32,0 chr1 19482126 . A . PASS END=19482150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1126:0,80,255:33,0 chr1 19482151 . C . PASS END=19482157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:22,0 chr1 19482158 . T . PASS END=19482162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:23:0,54,810:0,69,255:19,0 chr1 19482765 . C . PASS END=19482909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:38:0,90,1350:0,98,255:40,0 chr1 19482910 . T . PASS END=19482917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:54:32:0,54,810:0,96,255:18,0 chr1 19483261 . C . PASS END=19483266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:30,0 chr1 19483267 . C . PASS END=19483267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 19483268 . C . PASS END=19483273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 19483274 . A . PASS END=19483274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,936:0,76,255:30,0 chr1 19483275 . C . PASS END=19483394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:31:0,93,1156:0,93,255:40,0 chr1 19483395 . G . PASS END=19483419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:24:0,60,900:0,72,255:26,0 chr1 19484309 . C . PASS END=19484470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1070:0,82,255:40,0 chr1 19484471 . C . PASS END=19484480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 19484481 . A . PASS END=19484483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,64,255:19,0 chr1 19484484 . G . PASS END=19484491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,65,255:20,0 chr1 19486605 . C . PASS END=19486608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 19486609 . A . PASS END=19486609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 19486610 . G . PASS END=19486624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:19,0 chr1 19486625 . C . PASS END=19486625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 19486626 . C . PASS END=19486626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 19486627 . A . PASS END=19486631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 19486632 . C . PASS END=19486636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 19486637 . C . PASS END=19486638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19486639 . A . PASS END=19486639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 19486640 . C . PASS END=19486649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,853:0,63,255:26,0 chr1 19486650 . C . PASS END=19486650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:25,0 chr1 19486651 . T . PASS END=19486663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 19486664 . G . PASS END=19486676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 19486677 . G . PASS END=19486679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 19486680 . G . PASS END=19486697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 19486698 . T . PASS END=19486698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 19486699 . T . PASS END=19486704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19486705 . A . PASS END=19486705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 19486706 . A . PASS END=19486706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19486707 . G . PASS END=19486740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 19486741 . A . PASS END=19486746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:16,0 chr1 19486747 . A . PASS END=19486753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:15:0,36,540:0,45,255:13,0 chr1 19486754 . G . PASS END=19486755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,457:0,25,255:11,0 chr1 19486756 . G . PASS END=19486759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 19486760 . C . PASS END=19486765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 19486766 . A . PASS END=19486775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:25:12:0,25,368:0,25,255:9,0 chr1 19487411 . C . PASS END=19487424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr1 19487425 . C . PASS END=19487434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 19487435 . G . PASS END=19487435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 19487436 . C . PASS END=19487436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 19487437 . C . PASS END=19487447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:37,0 chr1 19487448 . C . PASS END=19487448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:37,0 chr1 19487449 . G . PASS END=19487615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1085:0,85,255:40,0 chr1 19487616 . C . PASS END=19487636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:24:0,60,900:0,68,255:25,0 chr1 19487637 . A . PASS END=19487637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 19487638 . G . PASS END=19487641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 19488083 . C . PASS END=19488230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:42:0,116,1604:0,116,255:40,0 chr1 19488321 . C . PASS END=19488391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,108,1524:0,108,255:40,0 chr1 19488914 . T . PASS END=19488963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1123:0,86,255:40,0 chr1 19488964 . A . PASS END=19488964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1374:0,79,255:36,0 chr1 19488965 . G . PASS END=19489085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:34:0,88,1350:0,88,255:40,1 chr1 19489086 . C . PASS END=19489098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:26,0 chr1 19489099 . T . PASS END=19489099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:21,0 chr1 19489100 . C . PASS END=19489103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 19489104 . T . PASS END=19489105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:25:0,42,630:0,59,255:14,0 chr1 19490258 . C . PASS END=19490321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,158,255:40,0 chr1 19490747 . C . PASS END=19490752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:26,0 chr1 19490753 . C . PASS END=19490756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 19490757 . G . PASS END=19490760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 19490761 . A . PASS END=19490761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19490762 . T . PASS END=19490770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 19490771 . G . PASS END=19490772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 19490773 . A . PASS END=19490773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 19490774 . T . PASS END=19490931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1103:0,86,255:40,0 chr1 19490932 . T . PASS END=19490932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 19490933 . T . PASS END=19490935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19491293 . C . PASS END=19491297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:31,0 chr1 19491298 . T . PASS END=19491298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:30,0 chr1 19491299 . T . PASS END=19491471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:33:0,83,1164:0,83,255:40,0 chr1 19491472 . C . PASS END=19491472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1151:0,75,255:28,0 chr1 19491473 . G . PASS END=19491485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1030:0,89,255:32,0 chr1 19491486 . T . PASS END=19491486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 19491487 . C . PASS END=19491491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1210:0,96,255:32,0 chr1 19491743 . T . PASS END=19491843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:91:38:0,91,1395:0,91,255:40,0 chr1 19492150 . C . PASS END=19492171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1335:0,105,255:37,0 chr1 19492172 . T . PASS END=19492172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1241:0,64,255:34,0 chr1 19492173 . A . PASS END=19492188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1620:0,111,255:37,0 chr1 19492189 . C . PASS END=19492189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1294:0,56,255:35,0 chr1 19492190 . T . PASS END=19492223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,95,255:37,0 chr1 19492224 . T . PASS END=19492244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:29:0,60,900:0,77,255:26,0 chr1 19492245 . C . PASS END=19492251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:18,0 chr1 19493516 . C . PASS END=19493529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1197:0,86,255:33,0 chr1 19493530 . A . PASS END=19493530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:31,0 chr1 19493531 . T . PASS END=19493718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1215:0,95,255:40,0 chr1 19493719 . T . PASS END=19493719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 19493720 . G . PASS END=19493725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1045:0,84,255:28,0 chr1 19494521 . A . PASS END=19494644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1077:0,80,255:40,0 chr1 19494645 . C . PASS END=19494674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 19494675 . T . PASS END=19494678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 19495929 . C . PASS END=19496026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,142,255:40,0 chr1 19497256 . C . PASS END=19497369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:34:0,92,1266:0,92,255:40,0 chr1 19497370 . A . PASS END=19497370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:31,0 chr1 19497371 . A . PASS END=19497377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1202:0,86,255:32,0 chr1 19499358 . C . PASS END=19499574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:33:0,89,1296:0,89,255:40,0 chr1 19499575 . A . PASS END=19499575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1499:0,58,255:36,0 chr1 19499576 . G . PASS END=19499587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:81:38:0,81,1294:0,81,255:36,0 chr1 19499675 . C . PASS END=19499800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,114,1751:0,114,255:40,0 chr1 19499933 . C . PASS END=19499942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr1 19499943 . T . PASS END=19499943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1279:0,74,255:40,0 chr1 19499944 . T . PASS END=19500071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,120,255:40,0 chr1 19500072 . A . PASS END=19500072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1784:0,76,255:40,0 chr1 19500073 . T . PASS END=19500093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:36:0,90,1440:0,90,255:40,0 chr1 19500094 . A . PASS END=19500095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:30,0 chr1 19500096 . T . PASS END=19500098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1272:0,92,255:32,0 chr1 19500099 . T . PASS END=19500099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:31,0 chr1 19500100 . G . PASS END=19500100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 19500101 . A . PASS END=19500101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 19500102 . A . PASS END=19500104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:31,0 chr1 19500105 . G . PASS END=19500105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,991:0,79,255:26,0 chr1 19500106 . C . PASS END=19500109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 19500110 . G . PASS END=19500115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,87,255:25,0 chr1 19500813 . C . PASS END=19500815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 19500816 . G . PASS END=19500839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:29,0 chr1 19500840 . T . PASS END=19500840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 19500841 . C . PASS END=19500923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1141:0,82,255:40,0 chr1 19500924 . G . PASS END=19500924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr1 19500925 . A . PASS END=19500930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 19500931 . A . PASS END=19500941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 19501448 . C . PASS END=19501527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,115,1791:0,115,255:40,0 chr1 19503086 . C . PASS END=19503088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:29,0 chr1 19503089 . A . PASS END=19503089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 19503090 . T . PASS END=19503217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1102:0,86,255:40,0 chr1 19503218 . G . PASS END=19503221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 19503955 . C . PASS END=19503955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1188:0,53,255:29,0 chr1 19503956 . T . PASS END=19504151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:35:0,84,1365:0,84,255:40,0 chr1 19504152 . G . PASS END=19504152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:50:50:0,50,1277:0,50,255:40,0 chr1 19504153 . C . PASS END=19504210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1215:0,90,255:40,0 chr1 19504211 . G . PASS END=19504237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,862:0,69,255:26,0 chr1 19505545 . C . PASS END=19505545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 19505546 . T . PASS END=19505546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,797:0,39,255:25,0 chr1 19505547 . G . PASS END=19505547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 19505548 . T . PASS END=19505548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 19505549 . C . PASS END=19505554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 19505555 . C . PASS END=19505562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 19505563 . C . PASS END=19505571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr1 19505572 . A . PASS END=19505573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1039:0,71,255:29,0 chr1 19505574 . G . PASS END=19505576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 19505577 . A . PASS END=19505577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1048:0,62,255:29,0 chr1 19505578 . G . PASS END=19505676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:35:0,92,1332:0,92,255:40,0 chr1 19505677 . G . PASS END=19505677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:35,2 chr1 19505678 . A . PASS END=19505678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1304:0,48,255:35,2 chr1 19505679 . A . PASS END=19505679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr1 19505680 . A . PASS END=19505697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,105,255:36,0 chr1 19505698 . T . PASS END=19505707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 19505708 . G . PASS END=19505714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr1 19510305 . C . PASS END=19510390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,164,255:40,0 chr1 19510510 . C . PASS END=19510521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:92:34:0,92,1240:0,92,255:34,0 chr1 19510522 . C . PASS END=19510522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1247:0,61,255:32,0 chr1 19510523 . T . PASS END=19510528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1327:0,105,255:35,0 chr1 19510529 . C . PASS END=19510529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr1 19510530 . A . PASS END=19510669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:35:0,92,1282:0,92,255:40,0 chr1 19511593 . C . PASS END=19511595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 19511596 . C . PASS END=19511597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 19511598 . C . PASS END=19511603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 19511604 . C . PASS END=19511641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,814:0,63,255:26,0 chr1 19511642 . G . PASS END=19511643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19511644 . C . PASS END=19511645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 19511646 . G . PASS END=19511719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:32,0 chr1 19511720 . T . PASS END=19511723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 19511724 . T . PASS END=19511726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19511727 . T . PASS END=19511730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19511731 . A . PASS END=19511741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 19511742 . C . PASS END=19511742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 19511743 . C . PASS END=19511747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 19511748 . A . PASS END=19511771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,933:0,67,255:26,0 chr1 19511772 . T . PASS END=19511772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:22,0 chr1 19511773 . G . PASS END=19511780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 19513034 . C . PASS END=19513041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:23,0 chr1 19513042 . C . PASS END=19513042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 19513043 . T . PASS END=19513059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:26,0 chr1 19513060 . C . PASS END=19513065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 19513066 . T . PASS END=19513066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 19513067 . C . PASS END=19513068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 19513069 . T . PASS END=19513069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 19513070 . C . PASS END=19513073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 19513074 . A . PASS END=19513074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 19513075 . T . PASS END=19513075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 19513076 . A . PASS END=19513111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr1 19513112 . T . PASS END=19513130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr1 19513131 . C . PASS END=19513131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 19513132 . T . PASS END=19513143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 19513144 . A . PASS END=19513144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 19513145 . C . PASS END=19513151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 19513658 . C . PASS END=19513661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1272:0,92,255:37,0 chr1 19513662 . C . PASS END=19513662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1284:0,78,255:35,0 chr1 19513663 . T . PASS END=19513795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,101,1322:0,101,255:40,0 chr1 19513935 . C . PASS END=19514034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:33:0,93,1260:0,99,255:40,0 chr1 19518682 . C . PASS END=19518692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 19518693 . C . PASS END=19518693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 19518694 . C . PASS END=19518697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,886:0,62,255:26,0 chr1 19518698 . G . PASS END=19518699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1051:0,96,255:32,0 chr1 19518700 . T . PASS END=19518700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 19518701 . T . PASS END=19518725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1186:0,96,255:37,0 chr1 19518726 . A . PASS END=19518726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 19518727 . C . PASS END=19518872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:36:0,91,1219:0,91,255:40,0 chr1 19518975 . C . PASS END=19519034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,185,255:40,0 chr1 19519927 . A . PASS END=19519928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 19519929 . A . PASS END=19520045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:28:0,80,1025:0,80,255:40,0 chr1 19520046 . T . PASS END=19520046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 19520047 . C . PASS END=19520051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 19523635 . C . PASS END=19523752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1125:0,83,255:40,0 chr1 19523753 . A . PASS END=19523753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:29,0 chr1 19523754 . T . PASS END=19523759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 19524164 . C . PASS END=19524305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,113,1694:0,113,255:40,0 chr1 19524441 . C . PASS END=19524543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,120,1800:0,128,255:40,0 chr1 19525035 . C . PASS END=19525174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:34:0,99,1485:0,102,255:40,0 chr1 19525293 . C . PASS END=19525387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:44:0,87,1305:0,116,255:40,0 chr1 19525388 . G . PASS END=19525400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:60:27:0,60,900:0,65,255:26,0 chr1 19525401 . T . PASS END=19525402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 19525403 . A . PASS END=19525404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:20,0 chr1 19525405 . T . PASS END=19525422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 19526145 . C . PASS END=19526248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1211:0,88,255:40,0 chr1 19528212 . T . PASS END=19528309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:39:0,81,1120:0,81,255:40,0 chr1 19536567 . C . PASS END=19536577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr1 19536578 . T . PASS END=19536578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 19536579 . G . PASS END=19536581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 19536582 . G . PASS END=19536582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:28,0 chr1 19536583 . C . PASS END=19536591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr1 19536592 . G . PASS END=19536592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 19536593 . C . PASS END=19536594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 19536595 . G . PASS END=19536595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 19536596 . C . PASS END=19536600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr1 19536601 . C . PASS END=19536601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 19536602 . C . PASS END=19536604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:30,0 chr1 19536605 . C . PASS END=19536605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 19536606 . A . PASS END=19536606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 19536607 . T . PASS END=19536607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1038:0,77,255:30,0 chr1 19536608 . C . PASS END=19536612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 19536613 . A . PASS END=19536613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 19536614 . G . PASS END=19536616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1178:0,93,255:31,0 chr1 19536617 . G . PASS END=19536617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 19536618 . G . PASS END=19536656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr1 19536657 . C . PASS END=19536681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,955:0,67,255:26,0 chr1 19536682 . T . PASS END=19536682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:20,0 chr1 19536683 . T . PASS END=19536683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 19536684 . G . PASS END=19536684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 19536685 . C . PASS END=19536695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 19536696 . G . PASS END=19536714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 19536715 . C . PASS END=19536715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:16,0 chr1 19536716 . C . PASS END=19536744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,690:0,57,255:19,0 chr1 19536745 . T . PASS END=19536745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 19536746 . C . PASS END=19536755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,44,255:16,0 chr1 19536756 . A . PASS END=19536763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 19536764 . T . PASS END=19536764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 19536765 . C . PASS END=19536766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 19536767 . C . PASS END=19536770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 19536771 . G . PASS END=19536793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,480:0,39,255:13,0 chr1 19536794 . C . PASS END=19536794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 19536795 . C . PASS END=19536796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 19536797 . C . PASS END=19536804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:13:0,21,315:0,39,255:8,0 chr1 19536805 . G . PASS END=19536805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:18:13:0,18,270:0,39,255:6,0 chr1 19536806 . A . PASS END=19536829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:7,0 chr1 19536830 . T . PASS END=19536856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,158:0,18,158:6,0 chr1 19545797 . T . PASS END=19545797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 19545798 . T . PASS END=19545798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:24,0 chr1 19545799 . A . PASS END=19545800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 19545801 . C . PASS END=19545801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:25,0 chr1 19545802 . G . PASS END=19545811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,946:0,78,255:26,0 chr1 19545812 . A . PASS END=19545819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 19545820 . G . PASS END=19545820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 19545821 . C . PASS END=19545953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1119:0,83,255:37,0 chr1 19545954 . A . PASS END=19545954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1029:0,60,255:28,0 chr1 19545955 . T . PASS END=19545961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 19545962 . A . PASS END=19545962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:29,0 chr1 19545963 . C . PASS END=19545976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1186:0,83,255:32,0 chr1 19546063 . C . PASS END=19546161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,102,1530:0,123,255:40,0 chr1 19546162 . A . PASS END=19546162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,0 chr1 19546163 . T . PASS END=19546192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1200:0,83,255:34,0 chr1 19547258 . C . PASS END=19547342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1279:0,81,255:40,0 chr1 19549118 . T . PASS END=19549122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 19549123 . A . PASS END=19549129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,71,255:26,0 chr1 19549130 . G . PASS END=19549130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 19549131 . G . PASS END=19549131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1009:0,41,255:25,0 chr1 19549132 . C . PASS END=19549135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 19549136 . T . PASS END=19549136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:29,0 chr1 19549137 . G . PASS END=19549139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 19549140 . G . PASS END=19549140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 19549141 . C . PASS END=19549141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 19549142 . C . PASS END=19549143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 19549144 . C . PASS END=19549291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1172:0,93,255:40,0 chr1 19549292 . A . PASS END=19549308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:25,0 chr1 19549309 . T . PASS END=19549309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 19549310 . T . PASS END=19549310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:24,0 chr1 19549311 . G . PASS END=19549312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,876:0,39,255:25,0 chr1 19549313 . T . PASS END=19549318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 19549319 . A . PASS END=19549328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:23:0,44,853:0,44,255:19,0 chr1 19549890 . C . PASS END=19549893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,930:0,72,255:24,0 chr1 19549894 . A . PASS END=19549907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr1 19549908 . A . PASS END=19549908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 19549909 . T . PASS END=19549920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1056:0,87,255:33,0 chr1 19549921 . A . PASS END=19549921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr1 19549922 . C . PASS END=19550028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:33:0,90,1160:0,90,255:40,0 chr1 19550029 . T . PASS END=19550029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1234:0,69,255:30,0 chr1 19550030 . C . PASS END=19550030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 19550031 . T . PASS END=19550031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:30,0 chr1 19550032 . G . PASS END=19550040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:32:0,82,1149:0,82,255:31,0 chr1 19550041 . G . PASS END=19550041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr1 19550042 . C . PASS END=19550056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1135:0,96,255:32,0 chr1 19550057 . T . PASS END=19550063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,70,255:26,0 chr1 19553807 . C . PASS END=19553944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:45:0,120,1800:0,126,255:40,0 chr1 19553950 . G . PASS END=19553950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,111,1665:0,150,255:37,0 chr1 19557338 . C . PASS END=19557346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1518:0,107,255:40,0 chr1 19557347 . C . PASS END=19557347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1288:0,73,255:38,0 chr1 19557348 . C . PASS END=19557447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1260:0,88,255:40,0 chr1 19557448 . A . PASS END=19557449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 19557450 . G . PASS END=19557450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:26,0 chr1 19557451 . C . PASS END=19557457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 19557755 . C . PASS END=19557916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1215:0,88,255:40,0 chr1 19559118 . C . PASS END=19559126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,945:0,75,255:25,0 chr1 19559127 . C . PASS END=19559133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:30,0 chr1 19559134 . A . PASS END=19559134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:30,0 chr1 19559135 . G . PASS END=19559266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1149:0,93,255:40,0 chr1 19559267 . G . PASS END=19559267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 19559422 . C . PASS END=19559424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 19559425 . C . PASS END=19559425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 19559426 . T . PASS END=19559430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr1 19559431 . T . PASS END=19559431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:29,0 chr1 19559432 . T . PASS END=19559436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 19559437 . G . PASS END=19559437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 19559438 . A . PASS END=19559457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:33,0 chr1 19559458 . A . PASS END=19559458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1270:0,78,255:34,0 chr1 19559459 . T . PASS END=19559598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:36:0,98,1380:0,98,255:40,0 chr1 19559599 . A . PASS END=19559599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1177:0,58,255:32,0 chr1 19559600 . G . PASS END=19559629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,89,255:35,0 chr1 19560674 . C . PASS END=19560682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,247,255:40,0 chr1 19561624 . C . PASS END=19561624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 19561625 . T . PASS END=19561637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:29,0 chr1 19561638 . A . PASS END=19561638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 19561639 . A . PASS END=19561725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1025:0,81,255:39,0 chr1 19561726 . T . PASS END=19561744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr1 19561745 . T . PASS END=19561745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 19561746 . G . PASS END=19561746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19563636 . C . PASS END=19563732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,102,1530:0,112,255:40,0 chr1 19564511 . C . PASS END=19564616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:89:35:0,89,1236:0,89,255:40,0 chr1 19564617 . A . PASS END=19564617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1286:0,78,255:30,0 chr1 19564618 . A . PASS END=19564633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:33,0 chr1 19564637 . G . PASS END=19564637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:25,0 chr1 19565289 . C . PASS END=19565351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,161,255:40,0 chr1 19565725 . C . PASS END=19565739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,890:0,62,255:26,0 chr1 19565740 . G . PASS END=19565764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 19565765 . T . PASS END=19565765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 19565766 . C . PASS END=19565768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 19565769 . C . PASS END=19565770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:29,0 chr1 19565771 . G . PASS END=19565785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr1 19565786 . A . PASS END=19565796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 19566312 . C . PASS END=19566312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 19566313 . T . PASS END=19566320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,984:0,81,255:29,0 chr1 19566321 . G . PASS END=19566321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 19566322 . T . PASS END=19566479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:30:0,84,1119:0,90,255:40,0 chr1 19566791 . C . PASS END=19566925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1215:0,82,255:40,0 chr1 19566926 . A . PASS END=19566931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 19566932 . A . PASS END=19566936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 19566937 . T . PASS END=19566940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 19567510 . C . PASS END=19567636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:38:0,81,1242:0,81,255:40,0 chr1 19568839 . C . PASS END=19568967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1288:0,92,255:40,0 chr1 19570108 . C . PASS END=19570200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,104,1471:0,104,255:40,0 chr1 19570201 . T . PASS END=19570201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1311:0,51,255:36,0 chr1 19570202 . C . PASS END=19570202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 19570444 . C . PASS END=19570450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1178:0,83,255:33,0 chr1 19570451 . G . PASS END=19570451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:33,0 chr1 19570452 . T . PASS END=19570487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:95:36:0,95,1349:0,95,255:38,0 chr1 19570488 . C . PASS END=19570488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:34,0 chr1 19570489 . C . PASS END=19570507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:37:0,84,1260:0,94,255:36,0 chr1 19570508 . C . PASS END=19570508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:28,0 chr1 19570509 . A . PASS END=19570509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1343:0,81,255:28,0 chr1 19571392 . T . PASS END=19571514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:40:0,90,1350:0,107,255:40,0 chr1 19571515 . T . PASS END=19571517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 19571518 . C . PASS END=19571522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 19571523 . T . PASS END=19571524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 19577909 . C . PASS END=19578003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:36:0,88,1325:0,88,255:40,0 chr1 19578330 . A . PASS END=19578353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 19578354 . A . PASS END=19578357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:52:23:0,52,762:0,52,255:19,0 chr1 19581276 . T . PASS END=19581334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:70:0,120,1800:0,167,255:40,0 chr1 19582442 . C . PASS END=19582450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,93,255:31,0 chr1 19582451 . T . PASS END=19582451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:30,0 chr1 19582452 . G . PASS END=19582485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:34:0,86,1231:0,86,255:38,0 chr1 19582486 . T . PASS END=19582486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:36,0 chr1 19582487 . G . PASS END=19582525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:34:0,96,1224:0,98,255:37,0 chr1 19582526 . A . PASS END=19582539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 19582540 . C . PASS END=19582545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,80,255:25,0 chr1 19583558 . G . PASS END=19583559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1372:0,101,255:37,0 chr1 19583560 . T . PASS END=19583560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:36,0 chr1 19583561 . G . PASS END=19583581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1322:0,103,255:40,0 chr1 19583582 . G . PASS END=19583582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1449:0,57,255:38,0 chr1 19583583 . A . PASS END=19583639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,95,255:40,0 chr1 19583948 . G . PASS END=19583955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 19583956 . A . PASS END=19583956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,915:0,57,255:26,0 chr1 19583957 . A . PASS END=19584012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1260:0,90,255:38,0 chr1 19584013 . T . PASS END=19584015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 19584327 . G . PASS END=19584366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,536:0,45,255:19,0 chr1 19584367 . G . PASS END=19584382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 19584383 . T . PASS END=19584422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 19584423 . C . PASS END=19584448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr1 19584449 . A . PASS END=19584455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 19584456 . C . PASS END=19584478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:6,0 chr1 19584971 . G . PASS END=19585047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:33:0,90,1350:0,99,255:40,0 chr1 19585175 . A . PASS END=19585320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1123:0,80,255:40,0 chr1 19585321 . C . PASS END=19585321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:27,0 chr1 19585322 . T . PASS END=19585322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 19585323 . G . PASS END=19585323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr1 19585324 . A . PASS END=19585324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 19593794 . T . PASS END=19593922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:34:0,84,1260:0,102,255:40,0 chr1 19593923 . C . PASS END=19593941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:26,0 chr1 19593942 . T . PASS END=19593947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr1 19593948 . T . PASS END=19593953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:21,0 chr1 19593954 . C . PASS END=19593955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 19595066 . C . PASS END=19595099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1185:0,80,255:40,0 chr1 19595100 . G . PASS END=19595136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,99,1551:0,99,255:40,0 chr1 19595137 . C T, 176.40 PASS DP=44;MQ=189.23;FractionInformativeReads=0.977 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,27,0:0,16,0:126:214,129,0,314,314,314:255,129,0:0,0:1.7640e+02,1.2640e+02,0.0000e+00,3.1117e+02,3.4594e+02,3.1418e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,24,19:0,0,24,19 chr1 19595138 . G . PASS END=19595174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,99,1321:0,106,255:40,0 chr1 19595175 . A . PASS END=19595195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:33,0 chr1 19595766 . T . PASS END=19595766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 19595767 . G . PASS END=19595854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1127:0,80,255:40,1 chr1 19595855 . C . PASS END=19595865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,108,1620:0,123,255:39,0 chr1 19596077 . C . PASS END=19596086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,158,255:40,0 chr1 19596087 . G . PASS END=19596123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,137,255:40,0 chr1 19596124 . C T, 245.18 PASS DP=66;MQ=149.49;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,33,0:0,33,0:195:283,198,0,2522,198,2522:255,198,0:0,0:2.4518e+02,1.9518e+02,0.0000e+00,4.5000e+02,2.2995e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,41:0,0,34,32 chr1 19596125 . A . PASS END=19596155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,170,255:40,0 chr1 19596156 . G T, 229.21 PASS DP=62;MQ=158.03;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,30,0:0,31,0:179:267,182,0,2253,182,2253:255,186,0:0,0:2.2921e+02,1.7921e+02,0.0000e+00,4.5000e+02,2.1398e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,37:0,0,31,30 chr1 19596157 . G . PASS END=19596173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,114,1710:0,159,255:40,0 chr1 19596945 . C . PASS END=19597049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:53:0,112,1800:0,112,255:40,0 chr1 19597242 . C . PASS END=19597283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,897:0,62,255:26,0 chr1 19597284 . C . PASS END=19597284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 19597285 . G . PASS END=19597290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 19597291 . C . PASS END=19597291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 19597292 . T . PASS END=19597337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,945:0,62,255:26,0 chr1 19597338 . C . PASS END=19597347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 19597348 . A . PASS END=19597348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 19597349 . G . PASS END=19597358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 19597359 . C . PASS END=19597359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 19597360 . A . PASS END=19597361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19597362 . C . PASS END=19597362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 19597363 . T . PASS END=19597363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 19597364 . G . PASS END=19597364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 19597365 . G . PASS END=19597371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 19597372 . A . PASS END=19597385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,939:0,65,255:25,0 chr1 19597386 . C . PASS END=19597386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 19597387 . A . PASS END=19597397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 19597398 . A . PASS END=19597398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 19597399 . A . PASS END=19597416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,917:0,69,255:25,0 chr1 19597417 . G . PASS END=19597417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 19597418 . T . PASS END=19597429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 19600355 . C . PASS END=19600457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,576:0,41,255:19,0 chr1 19600458 . C . PASS END=19600472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr1 19600473 . C . PASS END=19600521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 19600522 . G . PASS END=19600553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 19600554 . C . PASS END=19600555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 19600556 . G . PASS END=19600568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 19600840 . T . PASS END=19600845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 19600846 . C . PASS END=19600847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 19600848 . G . PASS END=19600848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 19600849 . C . PASS END=19600865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 19600866 . A . PASS END=19600866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:16,0 chr1 19600867 . A . PASS END=19600895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,605:0,41,255:19,0 chr1 19600896 . C . PASS END=19600896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 19600897 . T . PASS END=19600930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,696:0,44,255:19,0 chr1 19600931 . T . PASS END=19600974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,892:0,66,255:24,0 chr1 19600975 . G . PASS END=19600975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 19600976 . G . PASS END=19600986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 19600987 . G . PASS END=19600987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19600988 . T . PASS END=19601001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,79,255:28,0 chr1 19601002 . G . PASS END=19601075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1241:0,89,255:36,0 chr1 19601076 . G . PASS END=19601088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,82,255:26,0 chr1 19601089 . G . PASS END=19601090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:28,0 chr1 19601091 . T . PASS END=19601112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 19601113 . T . PASS END=19601113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:23,0 chr1 19601114 . G . PASS END=19601121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,901:0,75,255:25,0 chr1 19601122 . T . PASS END=19601122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 19601123 . G . PASS END=19601125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 19601126 . T . PASS END=19601133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 19609225 . C . PASS END=19609227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:35,0 chr1 19609228 . G . PASS END=19609228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 19609229 . C . PASS END=19609253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:35:0,105,1333:0,105,255:40,0 chr1 19609254 . T C, 173.41 PASS DP=42;MQ=116.99;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,20,0:0,22,0:123:211,126,0,1629,126,1629:255,126,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,19:0,0,19,23 chr1 19609255 . A . PASS END=19609291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,116,1598:0,116,255:40,0 chr1 19609292 . G . PASS END=19609386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1215:0,83,255:40,0 chr1 19610490 . C . PASS END=19610504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,892:0,72,255:24,0 chr1 19610505 . G . PASS END=19610521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,993:0,81,255:31,0 chr1 19610522 . G . PASS END=19610522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 19610523 . G . PASS END=19610613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1194:0,83,255:38,0 chr1 19610614 . C . PASS END=19610614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 19610615 . A . PASS END=19610619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 19611180 . C . PASS END=19611189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1316:0,92,255:38,0 chr1 19611190 . A . PASS END=19611226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:38:0,103,1350:0,103,255:40,1 chr1 19611227 . G A, 50.00 PASS DP=45;MQ=210.04;MQRankSum=-0.920;ReadPosRankSum=1.964;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,23,0:0.511,0.000:45:10,14,0:12,9,0:48:85,0,50,765,779,1544:255,0,255:20,0:5.0000e+01,6.5233e-05,5.2990e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,14,9:11,11,11,12 chr1 19611228 . G . PASS END=19611240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:44:0,96,1482:0,96,255:40,0 chr1 19611241 . T C, 172.03 PASS DP=42;MQ=203.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,22,0:0,20,0:122:210,125,0,1541,125,1541:255,129,0:0,0:1.7203e+02,1.2203e+02,0.0000e+00,4.5000e+02,1.5680e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,15:0,0,19,23 chr1 19611242 . C . PASS END=19611278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1365:0,98,255:40,0 chr1 19611279 . C . PASS END=19611279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 19611512 . C . PASS END=19611608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,127,255:40,0 chr1 19612382 . C . PASS END=19612439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,174,255:40,0 chr1 19612440 . A . PASS END=19612476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:54:0,120,1800:0,147,255:40,0 chr1 19612477 . C T, 46.35 PASS DP=55;MQ=88.98;MQRankSum=1.020;ReadPosRankSum=5.184;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,26,0:0.473,0.000:55:14,11,0:15,15,0:45:81,0,46,885,1037,1922:255,0,255:25,0:4.6352e+01,1.5273e-04,4.9200e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,9,17:13,16,10,16 chr1 19612478 . G . PASS END=19612486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,143,255:40,0 chr1 19612679 . C . PASS END=19612679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19612680 . T . PASS END=19612680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19612681 . C . PASS END=19612690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19612691 . C . PASS END=19612704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr1 19612705 . G . PASS END=19612705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 19612706 . C . PASS END=19612866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1001:0,84,255:39,0 chr1 19614213 . T . PASS END=19614213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 19614990 . C . PASS END=19615005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 19615006 . G . PASS END=19615006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 19615007 . C . PASS END=19615026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 19615027 . G . PASS END=19615027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:17,0 chr1 19615028 . C . PASS END=19615084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:15:0,41,630:0,41,255:19,0 chr1 19615085 . T . PASS END=19615085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 19615086 . G . PASS END=19615087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 19615088 . C . PASS END=19615090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 19615091 . C . PASS END=19615092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 19615093 . C . PASS END=19615093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:8,0 chr1 19615094 . T . PASS END=19615098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,25,255:9,0 chr1 19615099 . G . PASS END=19615102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:10,0 chr1 19615103 . G . PASS END=19615111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 19615112 . A . PASS END=19615112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:8,0 chr1 19615113 . C . PASS END=19615132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 19615133 . T . PASS END=19615133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr1 19615134 . C . PASS END=19615156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 19615157 . G . PASS END=19615158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 19615159 . G . PASS END=19615188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 19615189 . C . PASS END=19615199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 19615200 . A . PASS END=19615201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 19615202 . A . PASS END=19615203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 19630719 . C . PASS END=19630880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,102,1575:0,102,255:40,0 chr1 19632512 . C . PASS END=19632539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,903:0,81,255:40,0 chr1 19632540 . C . PASS END=19632540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:40,0 chr1 19632541 . G . PASS END=19632542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1590:0,94,255:40,0 chr1 19632543 . A . PASS END=19632543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:40,0 chr1 19632544 . G . PASS END=19632641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:37:0,95,1363:0,95,255:40,0 chr1 19633496 . C . PASS END=19633500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1158:0,99,255:34,0 chr1 19633501 . C . PASS END=19633501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:32,0 chr1 19633502 . C . PASS END=19633502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1311:0,105,255:35,0 chr1 19633503 . T . PASS END=19633503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1136:0,66,255:34,0 chr1 19633504 . G . PASS END=19633505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1266:0,105,255:35,0 chr1 19633506 . A . PASS END=19633506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1136:0,66,255:34,0 chr1 19633507 . G . PASS END=19633595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:85:36:0,85,1275:0,85,255:40,0 chr1 19633808 . C . PASS END=19633904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,111,1665:0,122,255:40,0 chr1 19634652 . C . PASS END=19634756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,120,1800:0,129,255:40,0 chr1 19634949 . C . PASS END=19634979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,917:0,62,255:26,0 chr1 19634980 . G . PASS END=19634994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,991:0,81,255:31,0 chr1 19634995 . G . PASS END=19634995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 19634996 . T . PASS END=19635015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 19635016 . A . PASS END=19635016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr1 19635017 . G . PASS END=19635097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1224:0,83,255:35,0 chr1 19635098 . A . PASS END=19635098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1161:0,47,255:31,0 chr1 19635099 . T . PASS END=19635099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 19635100 . T . PASS END=19635102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1116:0,60,255:31,0 chr1 19635103 . C . PASS END=19635109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 19635110 . A . PASS END=19635121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,77,255:24,0 chr1 19635122 . T . PASS END=19635122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 19635123 . G . PASS END=19635131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 19635132 . T . PASS END=19635132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr1 19635133 . T . PASS END=19635136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 19638321 . C . PASS END=19638331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 19638332 . C . PASS END=19638346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 19638347 . A . PASS END=19638367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 19638368 . G . PASS END=19638382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 19638383 . T . PASS END=19638402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 19638403 . G . PASS END=19638403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 19638404 . T . PASS END=19638411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 19638412 . G . PASS END=19638412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 19638413 . G . PASS END=19638427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 19638428 . A . LowGQ END=19638428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr1 19638429 . G . PASS END=19638473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,451:0,36,255:13,0 chr1 19638474 . G . PASS END=19638492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr1 19638493 . C . PASS END=19638522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,449:0,36,255:12,0 chr1 19638523 . C . PASS END=19638530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr1 19638531 . T . PASS END=19638532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 19638533 . G . PASS END=19638583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 19638584 . G . PASS END=19638611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 19638612 . T . PASS END=19638618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:5:0,9,135:0,15,194:3,0 chr1 19644172 . A . PASS END=19644177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr1 19644178 . T . PASS END=19644178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 19644179 . G . PASS END=19644221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 19644222 . C . PASS END=19644222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 19644223 . T . PASS END=19644223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 19644224 . C . PASS END=19644228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 19644229 . C . PASS END=19644229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr1 19644230 . A . PASS END=19644232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 19644233 . G . PASS END=19644251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 19644252 . T . PASS END=19644252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 19644253 . G . PASS END=19644257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:22,0 chr1 19644258 . T . PASS END=19644260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 19644261 . C . PASS END=19644262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 19644263 . A . PASS END=19644299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,558:0,44,255:17,0 chr1 19644300 . G . PASS END=19644335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 19651127 . C . PASS END=19651139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:31,0 chr1 19651140 . G . PASS END=19651239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:34:0,95,1251:0,95,255:40,0 chr1 19651240 . A . PASS END=19651256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:35,0 chr1 19651989 . A . PASS END=19652025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1072:0,84,255:38,0 chr1 19652026 . T . PASS END=19652062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1355:0,81,255:38,0 chr1 19652063 . G A, 50.00 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=-0.977;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,19,0:0.543,0.000:35:8,8,0:8,11,0:48:85,0,49,679,572,1252:255,0,255:14,0:5.0000e+01,6.8081e-05,5.2438e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,11,8:11,5,10,9 chr1 19652064 . C . PASS END=19652076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:34,0 chr1 19652739 . T . PASS END=19652761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr1 19652762 . C . PASS END=19652762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 19652763 . T . PASS END=19652774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 19652775 . T . PASS END=19652775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 19652776 . G . PASS END=19652776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 19652777 . G . PASS END=19652815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 19652816 . C . PASS END=19652822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 19652823 . C . PASS END=19652881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:19,0 chr1 19653025 . C . PASS END=19653042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,919:0,62,255:26,0 chr1 19653043 . G . PASS END=19653051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:30,0 chr1 19653052 . T . PASS END=19653052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 19653053 . T . PASS END=19653070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1149:0,90,255:31,0 chr1 19653071 . C . PASS END=19653075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 19653076 . G . PASS END=19653085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr1 19653086 . T . PASS END=19653088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19653089 . T . PASS END=19653101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1163:0,90,255:30,0 chr1 19653102 . T . PASS END=19653116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 19653117 . C . PASS END=19653117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 19653721 . T . PASS END=19653723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 19653724 . C . PASS END=19653725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 19653726 . C . PASS END=19653730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 19653731 . A . PASS END=19653761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,786:0,61,255:26,0 chr1 19653762 . C . PASS END=19653763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 19653764 . C . PASS END=19653766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 19653767 . T . PASS END=19653767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 19653768 . G . PASS END=19653840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1177:0,80,255:34,0 chr1 19653841 . A . PASS END=19653881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 19653882 . G . PASS END=19653882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 19653883 . G . PASS END=19653898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 19653899 . A . PASS END=19653899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 19653900 . C . PASS END=19653900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19653901 . A . PASS END=19653903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 19653904 . A . PASS END=19653906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 19654065 . T . PASS END=19654065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:23,0 chr1 19654066 . C . LowGQ END=19654067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:0:28:0,0,804:10,0,255:23,0 chr1 19654068 . T . PASS END=19654068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,881:0,34,255:23,0 chr1 19654069 . G . PASS END=19654069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,5:28:1:28:0,1,771:0,1,255:21,0 chr1 19654070 . C . PASS END=19654070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 19654071 . A . PASS END=19654071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:23,0 chr1 19654072 . C . PASS END=19654072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:22,0 chr1 19654073 . A . PASS END=19654073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 19654074 . C . PASS END=19654075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 19654076 . T . PASS END=19654076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:23,0 chr1 19654077 . C . PASS END=19654077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,749:0,3,255:22,0 chr1 19654078 . C . PASS END=19654078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 19654079 . T . PASS END=19654079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,792:0,28,255:23,0 chr1 19654080 . G . PASS END=19654080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,751:0,3,255:22,0 chr1 19654081 . T . PASS END=19654081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:23,0 chr1 19654082 . G . PASS END=19654088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 19654089 . G . PASS END=19654093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 19654094 . C . PASS END=19654094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 19654095 . A . PASS END=19654101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 19654102 . C . PASS END=19654102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 19654103 . C . PASS END=19654115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 19655066 . A . PASS END=19655112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,653:0,44,255:19,0 chr1 19655113 . G . PASS END=19655132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 19655133 . G . PASS END=19655137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 19666024 . T . PASS END=19666111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,111,1672:0,111,255:40,0 chr1 19669256 . T . PASS END=19669272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,115,1553:0,115,255:40,0 chr1 19669273 . T . PASS END=19669358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,108,1620:0,126,255:40,0 chr1 19670848 . T . PASS END=19670928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,140,255:40,0 chr1 19671681 . C . PASS END=19671697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,102,1280:0,102,255:38,0 chr1 19671698 . T . PASS END=19671698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr1 19671699 . G . PASS END=19671746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1172:0,83,255:37,0 chr1 19683129 . C . PASS END=19683130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 19683131 . G . PASS END=19683138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 19683139 . A . PASS END=19683139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 19683140 . G . PASS END=19683147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:31,0 chr1 19683148 . C . PASS END=19683148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 19683149 . C . PASS END=19683202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1105:0,86,255:35,0 chr1 19683203 . T . PASS END=19683203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:27,0 chr1 19683204 . G . PASS END=19683205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 19683206 . A . PASS END=19683206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 19683207 . G . PASS END=19683211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 19683212 . A . PASS END=19683212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr1 19683213 . C . PASS END=19683213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19683214 . T . PASS END=19683245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,860:0,69,255:25,0 chr1 19683916 . C . PASS END=19684017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,102,1482:0,102,255:40,0 chr1 19684018 . A . PASS END=19684018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1433:0,76,255:33,0 chr1 19684019 . T . PASS END=19684027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,111,255:35,0 chr1 19684028 . T . PASS END=19684034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:34:0,63,945:0,63,255:25,0 chr1 19684035 . A . PASS END=19684035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:21,0 chr1 19684036 . T . PASS END=19684043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:21,0 chr1 19684044 . C . PASS END=19684050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 19684051 . A . PASS END=19684051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:15,0 chr1 19684052 . A . PASS END=19684057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:16,0 chr1 19700940 . T . PASS END=19700949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,146,255:40,0 chr1 19705030 . T . PASS END=19705132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:83:33:0,83,1186:0,83,255:40,0 chr1 19705133 . T . PASS END=19705135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 19705136 . C . PASS END=19705136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 19705137 . T . PASS END=19705147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,77,255:24,0 chr1 19711999 . C . PASS END=19712120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1215:0,88,255:40,0 chr1 19743560 . T . PASS END=19743639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,853:0,66,255:26,0 chr1 19743640 . A . PASS END=19743653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 19743654 . C . PASS END=19743656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 19743657 . C . PASS END=19743658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 19746155 . C . PASS END=19746160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:26,0 chr1 19746161 . G . PASS END=19746163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 19746164 . C . PASS END=19746165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 19746166 . G . PASS END=19746168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 19746169 . C . PASS END=19746173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 19746174 . A . PASS END=19746174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 19746175 . G . PASS END=19746181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,911:0,67,255:26,0 chr1 19746182 . C . PASS END=19746208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,928:0,84,255:31,0 chr1 19746209 . C . PASS END=19746209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:28,0 chr1 19746210 . A . PASS END=19746219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1178:0,83,255:30,0 chr1 19746220 . A . PASS END=19746244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:26,0 chr1 19775328 . C . PASS END=19775328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 19775329 . T . PASS END=19775408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1081:0,82,255:40,0 chr1 19778627 . C . PASS END=19778636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 19778637 . C . PASS END=19778652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 19778653 . C . PASS END=19778653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 19778654 . C . PASS END=19778663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 19778664 . G . PASS END=19778664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 19778665 . C . PASS END=19778665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 19778666 . C . PASS END=19778680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,823:0,69,255:23,0 chr1 19778681 . A . PASS END=19778681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 19778682 . C . PASS END=19778682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 19778683 . T . PASS END=19778683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 19778684 . C . PASS END=19778684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 19778685 . A . PASS END=19778685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 19778686 . G . PASS END=19778687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 19778688 . T . PASS END=19778688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 19778689 . C . PASS END=19778690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:21,0 chr1 19778691 . T . PASS END=19778691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 19778692 . T . PASS END=19778694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 19778695 . T . PASS END=19778695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr1 19778696 . G . PASS END=19778697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 19778698 . C . PASS END=19778698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 19778699 . A . PASS END=19778700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 19778701 . G . PASS END=19778710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:21:0,42,630:0,46,255:19,0 chr1 19810684 . C . PASS END=19810762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1211:0,84,255:36,0 chr1 19810763 . C . PASS END=19810773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 19811930 . C . PASS END=19811930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19811931 . A . PASS END=19811931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 19811932 . T . PASS END=19811932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19923540 . A . PASS END=19923603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1294:0,92,255:39,0 chr1 19927443 . A . PASS END=19927465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,150,255:40,0 chr1 19943791 . A . PASS END=19943822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,131,255:40,0 chr1 19943823 . C A, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.280;ReadPosRankSum=4.892;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,29,0:0.537,0.000:54:12,17,0:13,12,0:48:85,0,50,992,894,1886:255,0,255:22,0:5.0000e+01,6.7563e-05,5.2572e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,7,22:9,16,13,16 chr1 19943824 . A . PASS END=19943830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,117,1755:0,153,255:40,0 chr1 19948594 . G . PASS END=19948641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,214,255:40,0 chr1 19949968 . G . PASS END=19950070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:36:0,91,1189:0,91,255:40,0 chr1 19950071 . T . PASS END=19950071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:34,0 chr1 19950072 . G . PASS END=19950077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:34,0 chr1 19951886 . A . PASS END=19951887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 19951888 . C . PASS END=19951890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 19951891 . G . PASS END=19951891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,788:0,39,255:20,0 chr1 19951892 . C . PASS END=19951900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 19951901 . T . PASS END=19951901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:22,0 chr1 19951902 . C . PASS END=19951903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 19951904 . G . PASS END=19951905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,837:0,56,255:22,0 chr1 19951906 . T . PASS END=19951925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr1 19951926 . C . PASS END=19951932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:30,0 chr1 19951933 . A . PASS END=19951933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 19951934 . G . PASS END=19951934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 19951935 . A . PASS END=19951935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 19951936 . G . PASS END=19951936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 19951937 . A . PASS END=19951937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 19951938 . T . PASS END=19951950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1274:0,91,255:35,0 chr1 19951951 . G . PASS END=19951951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr1 19951952 . C . PASS END=19952025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:31:0,83,1178:0,83,255:40,0 chr1 19952026 . A . PASS END=19952026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 19952027 . G . PASS END=19952028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 19952029 . C . PASS END=19952029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 19952030 . G . PASS END=19952032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 19952033 . A . PASS END=19952033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 19952034 . G . PASS END=19952042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 19952043 . T . PASS END=19952046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr1 19952047 . A . PASS END=19952047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19952048 . C . PASS END=19952048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19952049 . C . PASS END=19952049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 19952050 . A . PASS END=19952050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:25,0 chr1 19952051 . C . PASS END=19952054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 19952055 . C . PASS END=19952056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 19952057 . G . PASS END=19952078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:26,0 chr1 19952079 . A . PASS END=19952086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:19,0 chr1 19952881 . G . PASS END=19952895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,134,255:40,0 chr1 19969806 . A . PASS END=19969889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,89,255:40,0 chr1 19969890 . A . PASS END=19969891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1080:0,89,255:26,0 chr1 19972445 . A . PASS END=19972467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr1 19972468 . G . PASS END=19972474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 19972475 . A . PASS END=19972475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 19972476 . G . PASS END=19972482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1017:0,87,255:31,0 chr1 19972483 . T . PASS END=19972483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1011:0,62,255:30,0 chr1 19972484 . T . PASS END=19972505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1014:0,93,255:32,0 chr1 19972506 . T . PASS END=19972506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,981:0,65,255:31,0 chr1 19972507 . T . PASS END=19972517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1225:0,96,255:32,0 chr1 19972518 . A . PASS END=19972527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:26,0 chr1 19981505 . G . PASS END=19981509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1116:0,87,255:32,0 chr1 19981510 . T . PASS END=19981510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr1 19981511 . G . PASS END=19981534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1189:0,83,255:35,0 chr1 19981535 . G . PASS END=19981535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 19981536 . G . PASS END=19981539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1388:0,108,255:36,0 chr1 19981540 . T . PASS END=19981540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 19981541 . G . PASS END=19981693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1302:0,90,255:40,0 chr1 19981817 . G . PASS END=19981819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 19981820 . G . PASS END=19981821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 19981822 . G . PASS END=19981828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:22,0 chr1 19981829 . A . PASS END=19981928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:25,0 chr1 19981929 . G . PASS END=19981929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 19983359 . G . PASS END=19983361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 19983362 . A . PASS END=19983399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:18,0 chr1 19983400 . G . PASS END=19983431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:22,0 chr1 19983432 . G . PASS END=19983439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 19983440 . G . PASS END=19983442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19983443 . T . PASS END=19983443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 19983444 . G . PASS END=19983456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 19983457 . T . PASS END=19983457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 19983458 . A . PASS END=19983464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19983465 . A . PASS END=19983487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,47,255:18,0 chr1 19983488 . G . PASS END=19983488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:14,0 chr1 19983489 . G . PASS END=19983491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 19983492 . A . PASS END=19983509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr1 19983510 . A . PASS END=19983510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 19983511 . G . PASS END=19983515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 19983516 . G . PASS END=19983521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 19983522 . A . PASS END=19983522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:7,0 chr1 19983523 . C . PASS END=19983529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,23,255:9,0 chr1 19983530 . C . PASS END=19983534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 19983535 . T . LowGQ END=19983536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,180:12,0,200:6,0 chr1 19983537 . C . PASS END=19983539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,235:6,0 chr1 19983540 . A . LowGQ END=19983541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,155:7,0,186:5,0 chr1 19983542 . C . PASS END=19983542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 19983543 . C . PASS END=19983543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr1 19983544 . C . PASS END=19983545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 19983546 . A . LowGQ END=19983546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,200:6,0,206:6,0 chr1 19983547 . T . PASS END=19983547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 19983548 . C . LowGQ END=19983548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:7,0 chr1 19983549 . C . PASS END=19983549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 19983550 . T . PASS END=19983550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 19983551 . G . PASS END=19983552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 19983553 . C . PASS END=19983553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 19983554 . G . PASS END=19983556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 19983557 . C . LowGQ END=19983557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:7,0 chr1 19983558 . A . PASS END=19983558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 19983559 . G . PASS END=19983559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 19983560 . A . PASS END=19983560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:6,0 chr1 19983561 . C . PASS END=19983564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 19983565 . T . PASS END=19983565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr1 19983566 . G . PASS END=19983566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 19983567 . A . PASS END=19983568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 19983569 . C . PASS END=19983575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 19983576 . A . LowGQ END=19983578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,235:4,0,239:8,1 chr1 19983579 . C . PASS END=19983584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 19983585 . G . PASS END=19983589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 19983590 . C . PASS END=19983590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 19983591 . C . PASS END=19983592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr1 19983593 . C . PASS END=19983593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 19983594 . A . PASS END=19983597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:5,0 chr1 19983598 . A . LowGQ END=19983598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 19983599 . G . PASS END=19983599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 19983600 . A . LowGQ END=19983600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 19983601 . G . PASS END=19983602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr1 19983603 . A . LowGQ END=19983604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,140:3,0 chr1 19983605 . G . PASS END=19983608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 19983609 . G . PASS END=19983622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,108:0,9,108:3,0 chr1 19992247 . A . PASS END=19992250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:9,0 chr1 19992251 . T . PASS END=19992260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 19992261 . G . PASS END=19992261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,304:0,2,255:10,0 chr1 19992262 . G . PASS END=19992268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 19992269 . C . PASS END=19992269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 19992270 . C . PASS END=19992270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 19992271 . G . PASS END=19992273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 19992274 . A . PASS END=19992275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,358:0,33,255:11,0 chr1 19992276 . T . PASS END=19992276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 19992277 . A . PASS END=19992277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 19992278 . G . PASS END=19992278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 19992279 . C . PASS END=19992280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 19992281 . C . PASS END=19992282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 19992283 . C . PASS END=19992292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:12,0 chr1 19992293 . G . PASS END=19992297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 19992298 . G . PASS END=19992298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 19992299 . G . PASS END=19992302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:15,0 chr1 19992303 . G . PASS END=19992303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 19992304 . C . PASS END=19992305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 19992306 . G . PASS END=19992306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:13,0 chr1 19992307 . T . PASS END=19992307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:15,0 chr1 19992308 . C . PASS END=19992309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 19992310 . G . PASS END=19992316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,505:0,45,255:16,0 chr1 19992317 . G . PASS END=19992317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 19992318 . G . PASS END=19992318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19992319 . G . PASS END=19992319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 19992320 . G . PASS END=19992320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19992321 . C . PASS END=19992321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 19992322 . A . PASS END=19992322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19992323 . G . PASS END=19992325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,520:0,31,255:15,0 chr1 19992326 . G . PASS END=19992327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 19992328 . T . PASS END=19992328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 19992329 . G . LowGQ END=19992329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,457:7,0,255:14,0 chr1 19992330 . G . PASS END=19992341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 19992342 . G . PASS END=19992342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 19992343 . C . PASS END=19992355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:18,0 chr1 19992356 . T . PASS END=19992356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 19992357 . C . PASS END=19992359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 19992360 . G . PASS END=19992360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:16,0 chr1 19992361 . C . PASS END=19992405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,607:0,51,255:19,0 chr1 19992406 . C . PASS END=19992410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 19992411 . C . PASS END=19992411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 19992412 . G . PASS END=19992417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:25,0 chr1 19992418 . C . PASS END=19992418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 19992419 . G . PASS END=19992463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,885:0,61,255:26,0 chr1 19992464 . T . PASS END=19992464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,786:0,41,255:23,0 chr1 19992465 . G . PASS END=19992492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,864:0,71,255:25,0 chr1 19992493 . G . PASS END=19992493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:26,0 chr1 19992494 . C . PASS END=19992494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 19992495 . C . PASS END=19992495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 19992496 . A . PASS END=19992496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 19992497 . T . PASS END=19992512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:28,0 chr1 19992513 . C . PASS END=19992513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 19992514 . G . PASS END=19992525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 19992526 . C . PASS END=19992526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr1 19992527 . T . PASS END=19992536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1131:0,90,255:30,0 chr1 19992537 . C . PASS END=19992541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 19992542 . G . PASS END=19992542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 19992543 . C . PASS END=19992565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,961:0,75,255:25,0 chr1 19992566 . T . PASS END=19992566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:23,0 chr1 19992567 . G . PASS END=19992591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 19992592 . A . PASS END=19992592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 19992593 . A . PASS END=19992595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 19992596 . T . PASS END=19992596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 19992597 . C . PASS END=19992597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19992598 . T . PASS END=19992602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 19992603 . C . PASS END=19992606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 19992607 . A . PASS END=19992607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 19992608 . G . PASS END=19992610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 19992611 . T . PASS END=19992612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 19992613 . G . PASS END=19992615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 19992616 . C . PASS END=19992621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 19992622 . C . PASS END=19992622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 19992623 . T . PASS END=19992655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,576:0,40,255:19,0 chr1 19992656 . G . PASS END=19992656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 19992657 . C . PASS END=19992658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 19992659 . T . PASS END=19992659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 19992660 . G . PASS END=19992660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 19992661 . A . PASS END=19992661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 19992662 . C . PASS END=19992676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 19992677 . T . PASS END=19992677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 19992678 . G . PASS END=19992683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 19992684 . A . PASS END=19992684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 19992685 . G . PASS END=19992722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 19992723 . C . PASS END=19992725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 19992726 . G . PASS END=19992726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 19992727 . C . PASS END=19992734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 19992735 . G . PASS END=19992735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 19992736 . C . PASS END=19992777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 19992778 . G . PASS END=19992778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 19992779 . G . PASS END=19992779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr1 19992780 . C . PASS END=19992780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 19992781 . C . PASS END=19992804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,553:0,45,255:16,0 chr1 19992805 . C . PASS END=19992805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 19992806 . C . PASS END=19992817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 19992818 . T . PASS END=19992819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr1 19992820 . G . PASS END=19992888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,620:0,48,255:19,0 chr1 19992889 . G . PASS END=19992890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 19992891 . C . PASS END=19992919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 19992920 . T . PASS END=19992928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,41,255:13,0 chr1 19992929 . G . PASS END=19992942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 19992943 . G . PASS END=19992960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 20005060 . G . PASS END=20005070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr1 20005071 . C . PASS END=20005076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 20005077 . C . PASS END=20005080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 20005081 . G . PASS END=20005087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 20005088 . A . PASS END=20005098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 20005099 . A . PASS END=20005099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 20005100 . G . PASS END=20005120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,750:0,63,255:24,0 chr1 20005121 . A . PASS END=20005121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 20005122 . C . PASS END=20005134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,886:0,72,255:24,0 chr1 20005135 . C . PASS END=20005135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 20005136 . T . PASS END=20005137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 20005138 . A . PASS END=20005138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 20005139 . A . PASS END=20005149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:24,0 chr1 20005150 . A . PASS END=20005150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:20,0 chr1 20005151 . C . PASS END=20005170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 20005171 . A . PASS END=20005171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 20005172 . T . PASS END=20005175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 20005176 . C . PASS END=20005177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,646:0,46,255:20,0 chr1 20005178 . T . PASS END=20005182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20005183 . A . PASS END=20005209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,47,255:19,0 chr1 20005210 . A . PASS END=20005218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 20005412 . G . PASS END=20005423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:25,0 chr1 20005424 . T . PASS END=20005424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 20005425 . G . PASS END=20005427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:26,0 chr1 20005428 . T . PASS END=20005428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,859:0,31,255:24,0 chr1 20005429 . C . PASS END=20005440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr1 20005441 . C . PASS END=20005441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20005442 . T . PASS END=20005442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 20005443 . T . PASS END=20005448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:32,0 chr1 20005449 . T . PASS END=20005449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr1 20005450 . C . PASS END=20005456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1131:0,80,255:33,0 chr1 20005457 . T . PASS END=20005457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:30,0 chr1 20005458 . G . PASS END=20005459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:31,0 chr1 20005460 . C . PASS END=20005460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:29,0 chr1 20005461 . T . PASS END=20005466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 20005467 . A . PASS END=20005467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:30,0 chr1 20005468 . C . PASS END=20005477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1203:0,86,255:34,0 chr1 20005478 . A . PASS END=20005478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:32,0 chr1 20005479 . C . PASS END=20005502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1213:0,89,255:34,0 chr1 20005503 . T . PASS END=20005503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:32,0 chr1 20005504 . C . PASS END=20005513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1150:0,85,255:33,0 chr1 20005514 . G . PASS END=20005514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:32,0 chr1 20005515 . A . PASS END=20005541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1215:0,83,255:33,0 chr1 20005542 . T . PASS END=20005542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 20005543 . G . PASS END=20005543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 20005544 . C . PASS END=20005551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:32:0,69,1035:0,80,255:26,0 chr1 20005552 . A . PASS END=20005552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1108:0,41,255:23,0 chr1 20005553 . C . PASS END=20005586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 20005587 . C . PASS END=20005600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr1 20005601 . A . PASS END=20005604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:37:18:0,37,493:0,37,255:13,0 chr1 20005605 . C . PASS END=20005621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,566:0,45,255:16,0 chr1 20005622 . C . PASS END=20005638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 20005639 . G . PASS END=20005639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 20005640 . C . PASS END=20005690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 20005691 . G . PASS END=20005695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 20005696 . A . PASS END=20005748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 20005749 . C . PASS END=20005749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 20005750 . C . PASS END=20005789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 20005790 . G . PASS END=20005790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 20005791 . T . PASS END=20005810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 20005811 . C . PASS END=20005811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 20005812 . C . PASS END=20005815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 20005816 . G . PASS END=20005842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:13,0 chr1 20005843 . T . PASS END=20005858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 20005859 . T . PASS END=20005859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 20005860 . G . PASS END=20005861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 20009122 . T . PASS END=20009122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 20009123 . T . PASS END=20009123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 20009124 . A . PASS END=20009128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,654:0,54,255:19,0 chr1 20009129 . G . PASS END=20009143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:22,0 chr1 20009144 . G . PASS END=20009144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 20009145 . G . PASS END=20009152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 20009153 . G . PASS END=20009153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 20009154 . C . PASS END=20009158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 20009159 . G . PASS END=20009159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 20009160 . G . PASS END=20009160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 20009161 . C . PASS END=20009161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 20009162 . C . PASS END=20009166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 20009167 . A . PASS END=20009169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,760:0,52,255:19,0 chr1 20009170 . G . PASS END=20009177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20009178 . G . PASS END=20009207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,621:0,40,255:19,0 chr1 20009533 . T . PASS END=20009535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 20009536 . G . PASS END=20009537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 20009538 . C . PASS END=20009558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 20009559 . G . PASS END=20009559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 20009560 . G . PASS END=20009572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 20009573 . C . PASS END=20009575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 20009576 . T . PASS END=20009583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 20009584 . G . PASS END=20009585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 20009586 . C . PASS END=20009603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 20009604 . T . PASS END=20009614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr1 20009615 . C . PASS END=20009623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 20009624 . G . PASS END=20009656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr1 20009657 . G . PASS END=20009665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 20009666 . G . PASS END=20009696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,45,255:19,0 chr1 20009697 . G . PASS END=20009698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 20009699 . C . PASS END=20009699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 20009700 . T . PASS END=20009712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr1 20009713 . C . PASS END=20009713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 20009714 . A . PASS END=20009714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,699:0,39,255:22,0 chr1 20009715 . T . PASS END=20009716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 20009717 . G . PASS END=20009717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 20009718 . C . PASS END=20009725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,825:0,72,255:24,0 chr1 20009726 . G . PASS END=20009726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 20009727 . A . PASS END=20009737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 20009738 . G . PASS END=20009748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 20009749 . C . PASS END=20009753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 20009754 . T . PASS END=20009789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,603:0,40,255:19,0 chr1 20009790 . C . PASS END=20009790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 20009791 . G . PASS END=20009792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr1 20009793 . C . PASS END=20009793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 20009794 . A . PASS END=20009803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 20009804 . T . PASS END=20009804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 20009805 . G . PASS END=20009811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 20009812 . C . PASS END=20009813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 20009814 . C . PASS END=20009818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 20009819 . G . PASS END=20009830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 20009831 . C . PASS END=20009835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 20009836 . G . PASS END=20009836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 20009837 . G . PASS END=20009842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 20009843 . A . PASS END=20009851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 20009852 . T . PASS END=20009852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 20009853 . T . PASS END=20009862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 20009863 . G . PASS END=20009863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 20009864 . C . PASS END=20009865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 20009866 . T . PASS END=20009866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 20009867 . G . PASS END=20009885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,449:0,33,255:12,0 chr1 20009886 . C . PASS END=20009902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:8:0,24,302:0,24,255:9,0 chr1 20009903 . T . LowGQ END=20009903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:7,0,247:7,0 chr1 20009904 . C . PASS END=20009912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 20009913 . T . PASS END=20009917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 20009918 . T . PASS END=20009918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 20009919 . A . PASS END=20009937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,217:0,18,217:6,0 chr1 20020927 . C . PASS END=20020930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 20020931 . G . PASS END=20020950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,800:0,63,255:25,0 chr1 20020951 . C . PASS END=20020954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:25,0 chr1 20020955 . C . PASS END=20020992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1064:0,87,255:33,0 chr1 20020993 . A G, 503.57 PASS DP=34;MQ=249.57;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:450:541,457,0,641,641,641:255,102,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,16:0,0,22,12:20020993 chr1 20020994 . C T, 47.16 PASS DP=34;MQ=249.57;MQRankSum=4.075;ReadPosRankSum=2.339;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,13,0:0.382,0.000:34:9,9,0:12,4,0:45:82,0,47,182,182,182:255,0,255:18,0:4.7156e+01,1.2710e-04,5.0000e+01,1.8193e+02,2.1670e+02,1.8494e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,10,7,6:11,10,11,2:20020993 chr1 20020995 . G . PASS END=20021036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1017:0,80,255:30,0 chr1 20021037 . A . PASS END=20021038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20021039 . T . PASS END=20021044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 20027261 . C . PASS END=20027261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 20027262 . T . PASS END=20027378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1149:0,93,255:40,0 chr1 20063865 . C . PASS END=20063865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 20063866 . T . PASS END=20063867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 20063868 . T . PASS END=20063868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,925:0,35,255:28,0 chr1 20063869 . C . PASS END=20063870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 20063871 . C . PASS END=20063871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:29,0 chr1 20063872 . T . PASS END=20063881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:31,0 chr1 20063882 . T . PASS END=20063882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 20063883 . C . PASS END=20063949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1225:0,86,255:40,0 chr1 20066317 . C . PASS END=20066317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 20066318 . T . PASS END=20066329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 20066330 . A . PASS END=20066346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 20066347 . G . PASS END=20066347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 20066348 . T . PASS END=20066348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 20066349 . G . PASS END=20066360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 20066361 . C . PASS END=20066361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 20066362 . T . PASS END=20066373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,870:0,69,255:24,0 chr1 20066374 . G . PASS END=20066374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 20066375 . A . PASS END=20066376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 20066377 . A . PASS END=20066377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:20,0 chr1 20066378 . C . PASS END=20066386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:23,0 chr1 20066387 . C . PASS END=20066387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 20066388 . A . PASS END=20066388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,748:0,69,255:23,0 chr1 20066389 . G . PASS END=20066389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 20066390 . G . PASS END=20066404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 20066405 . T . PASS END=20066405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr1 20066406 . T . PASS END=20066425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,878:0,69,255:24,0 chr1 20066426 . G . PASS END=20066444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,47,255:19,0 chr1 20066445 . C . PASS END=20066453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 20067270 . C . PASS END=20067278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,71,255:27,0 chr1 20067279 . C . PASS END=20067279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 20067280 . T . PASS END=20067280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 20067281 . G . PASS END=20067386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1189:0,86,255:40,0 chr1 20067387 . A . PASS END=20067400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:25,0 chr1 20067401 . T . PASS END=20067401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 20067402 . G . PASS END=20067402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 20067403 . G . PASS END=20067403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 20067404 . G . PASS END=20067417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 20067418 . C . PASS END=20067434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 20071957 . C . PASS END=20072024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,101,1418:0,101,255:40,0 chr1 20072025 . G . PASS END=20072025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1488:0,60,255:39,0 chr1 20072026 . G . PASS END=20072144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:33:0,84,1319:0,84,255:40,0 chr1 20072949 . C . PASS END=20072949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 20072950 . T . PASS END=20072979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 20072980 . C . PASS END=20072980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 20072981 . G . PASS END=20072990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr1 20072991 . T . PASS END=20072991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 20072992 . G . PASS END=20073075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,545:0,40,255:19,0 chr1 20073076 . T . PASS END=20073081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 20073082 . T . PASS END=20073082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 20073083 . C . PASS END=20073089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:10,0 chr1 20073090 . C . PASS END=20073090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 20073091 . A . PASS END=20073092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 20073656 . C . PASS END=20073753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:49:0,95,1719:0,95,255:40,0 chr1 20082127 . T . PASS END=20082148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 20082149 . C . PASS END=20082149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 20082150 . C . PASS END=20082163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,878:0,66,255:26,0 chr1 20082164 . G . PASS END=20082164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 20082165 . G . PASS END=20082167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,959:0,65,255:26,0 chr1 20082168 . C . PASS END=20082177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr1 20082178 . A . PASS END=20082178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 20082179 . G . PASS END=20082189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:32,0 chr1 20082190 . T . PASS END=20082190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 20082191 . C . PASS END=20082200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 20082201 . C . PASS END=20082201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:27,0 chr1 20082202 . A . PASS END=20082203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 20082204 . T . PASS END=20082205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:26,0 chr1 20082206 . G . PASS END=20082210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 20082211 . A . PASS END=20082215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,984:0,68,255:26,0 chr1 20082216 . G . PASS END=20082216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20082217 . G . PASS END=20082217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:26,0 chr1 20082218 . T . PASS END=20082219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20082220 . A . PASS END=20082220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 20082221 . T . PASS END=20082224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr1 20082225 . G . PASS END=20082225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 20082226 . C . PASS END=20082239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,892:0,86,255:29,0 chr1 20082240 . G . PASS END=20082241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 20082242 . C . PASS END=20082243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20082244 . C . PASS END=20082255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,70,255:24,0 chr1 20082256 . T . PASS END=20082259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 20097035 . C . PASS END=20097062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,138,255:40,0 chr1 20097801 . C . PASS END=20097848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:34:0,95,1264:0,95,255:40,0 chr1 20097849 . A . PASS END=20097849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1478:0,74,255:40,0 chr1 20097850 . A . PASS END=20097951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:35:0,81,1215:0,92,255:40,0 chr1 20097952 . G . PASS END=20097953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 20097954 . C . PASS END=20097956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,85,255:28,0 chr1 20097957 . G . PASS END=20097975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,65,255:26,0 chr1 20107073 . C . PASS END=20107087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,646:0,57,255:19,0 chr1 20107088 . G . PASS END=20107100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 20107101 . A . PASS END=20107101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 20107102 . C . PASS END=20107108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:25,0 chr1 20107109 . A . PASS END=20107116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,875:0,81,255:31,0 chr1 20107117 . G . PASS END=20107117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 20107118 . A . PASS END=20107122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 20107123 . A . PASS END=20107123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 20107124 . G . PASS END=20107135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1172:0,80,255:32,0 chr1 20107136 . C . PASS END=20107136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 20107137 . G . PASS END=20107174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:31:0,80,1139:0,80,255:36,0 chr1 20107175 . G . PASS END=20107175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr1 20107176 . G . PASS END=20107201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:33,0 chr1 20107202 . A . PASS END=20107202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 20107203 . C . PASS END=20107213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 20107214 . T . PASS END=20107214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 20107215 . G . PASS END=20107220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 20107221 . G . PASS END=20107221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 20107222 . C . PASS END=20107235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 20107236 . T . PASS END=20107237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1111:0,79,255:26,0 chr1 20107238 . T . PASS END=20107243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:28,0 chr1 20107244 . A . PASS END=20107259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,68,255:26,0 chr1 20111899 . C . PASS END=20111900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,937:0,75,255:26,0 chr1 20111901 . G . PASS END=20111972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1076:0,87,255:36,0 chr1 20113519 . C . PASS END=20113523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 20113524 . T . PASS END=20113525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20113526 . T . PASS END=20113538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 20113539 . G . PASS END=20113539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:25,0 chr1 20113540 . T . PASS END=20113541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 20113542 . G . PASS END=20113547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:31,0 chr1 20113548 . T . PASS END=20113548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:29,0 chr1 20113549 . C . PASS END=20113590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1135:0,83,255:32,0 chr1 20113591 . G . PASS END=20113592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 20113593 . A . PASS END=20113597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr1 20113598 . T . PASS END=20113598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 20113599 . A . PASS END=20113600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 20113601 . G . PASS END=20113601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 20113602 . C . PASS END=20113602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 20113603 . A . PASS END=20113603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:27,0 chr1 20113604 . A . PASS END=20113608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:28,0 chr1 20113609 . C . PASS END=20113610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 20119925 . C . PASS END=20120050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,123,255:40,0 chr1 20124564 . C . PASS END=20124566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,116,1528:0,116,255:39,0 chr1 20125977 . C . PASS END=20125994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,978:0,78,255:26,0 chr1 20140911 . T . PASS END=20140919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 20140920 . G . PASS END=20140920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 20140921 . G . PASS END=20140930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,692:0,44,255:19,0 chr1 20140931 . G . PASS END=20140946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 20140947 . T . PASS END=20140947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 20140948 . C . PASS END=20141009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,62,255:25,0 chr1 20141010 . G . PASS END=20141021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 20141022 . C . PASS END=20141027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20141028 . G . PASS END=20141043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 20141044 . A . PASS END=20141044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:16,0 chr1 20141045 . A . PASS END=20141056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,607:0,40,255:17,0 chr1 20141057 . A . PASS END=20141057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 20141058 . T . PASS END=20141062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 20141063 . A . PASS END=20141063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr1 20141064 . G . PASS END=20141069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,53,255:15,0 chr1 20141070 . C . PASS END=20141075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr1 20141076 . G . PASS END=20141087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 20141088 . G . PASS END=20141098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 20141099 . T . PASS END=20141103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 20141104 . A . PASS END=20141104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 20141105 . A . PASS END=20141115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 20141116 . A . PASS END=20141116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 20141117 . G . PASS END=20141160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,607:0,40,255:19,0 chr1 20141161 . A . PASS END=20141163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20141164 . T . PASS END=20141168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 20141169 . C . PASS END=20141179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:20,0 chr1 20141180 . C . PASS END=20141259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,607:0,41,255:19,0 chr1 20141260 . G . PASS END=20141298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:24,0 chr1 20141299 . A . PASS END=20141299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 20141300 . G . PASS END=20141309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:20,0 chr1 20141310 . G . PASS END=20141310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 20141311 . A . PASS END=20141311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,593:0,21,255:18,0 chr1 20141312 . G . PASS END=20141344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,698:0,54,255:19,0 chr1 20141345 . G . PASS END=20141347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 20141348 . G . PASS END=20141348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 20141349 . G . PASS END=20141352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 20141353 . G . PASS END=20141353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 20141354 . T . PASS END=20141355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 20141356 . A . PASS END=20141358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 20141359 . G . PASS END=20141360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20141361 . C . PASS END=20141366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 20141367 . G . PASS END=20141370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 20141371 . T . PASS END=20141384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,727:0,47,255:19,0 chr1 20141385 . C . PASS END=20141385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:19,0 chr1 20141386 . A . PASS END=20141387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 20141388 . G . PASS END=20141388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 20141389 . A . PASS END=20141392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20141393 . T . PASS END=20141393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 20141394 . C . PASS END=20141395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 20141396 . G . PASS END=20141410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,792:0,52,255:19,0 chr1 20141411 . A . PASS END=20141415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 20141416 . T . PASS END=20141416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 20141417 . G . PASS END=20141420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 20141421 . G . PASS END=20141421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 20141422 . C . PASS END=20141429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 20141430 . C . PASS END=20141432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 20141433 . C . PASS END=20141437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 20141438 . G . PASS END=20141447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 20141448 . A . PASS END=20141448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:17,0 chr1 20141449 . C . PASS END=20141451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,50,255:18,0 chr1 20141452 . C . PASS END=20141454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 20141455 . T . PASS END=20141455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 20141456 . A . PASS END=20141457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 20141458 . G . PASS END=20141458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 20141459 . G . PASS END=20141464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 20141465 . G . PASS END=20141465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 20141466 . G . PASS END=20141472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:25,0 chr1 20141473 . A . PASS END=20141473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 20141474 . G . PASS END=20141498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr1 20141499 . G . PASS END=20141504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:30,0 chr1 20141505 . A . PASS END=20141505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 20141506 . T . PASS END=20141529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:30,0 chr1 20141530 . G . PASS END=20141530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 20141531 . T . PASS END=20141531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20141532 . G . PASS END=20141532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr1 20141533 . G . PASS END=20141533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20141534 . T . PASS END=20141534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 20141535 . G . PASS END=20141536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 20141537 . T . PASS END=20141537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1024:0,38,255:27,0 chr1 20141538 . T . PASS END=20141538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 20141539 . G . PASS END=20141539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 20141540 . T . PASS END=20141540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr1 20141541 . G . PASS END=20141541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 20141542 . G . PASS END=20141546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 20141547 . T . PASS END=20141547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 20141548 . C . PASS END=20141548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 20141549 . C . PASS END=20141549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 20141550 . T . PASS END=20141552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20141553 . G . PASS END=20141553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:25,0 chr1 20141554 . G . PASS END=20141557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 20141558 . T . PASS END=20141558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 20141559 . G . PASS END=20141563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 20141564 . G . PASS END=20141564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 20141565 . G . PASS END=20141568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20141569 . T . PASS END=20141569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 20141570 . G . PASS END=20141576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 20141577 . G . PASS END=20141594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,887:0,67,255:26,0 chr1 20208782 . A . PASS END=20208849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,522:0,42,255:19,0 chr1 20208850 . A . PASS END=20208855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 20208856 . C . PASS END=20208856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 20208857 . C . PASS END=20208860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 20208861 . G . PASS END=20208861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 20208862 . T . PASS END=20208864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20208865 . T . PASS END=20208893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,46,255:19,0 chr1 20208894 . T . PASS END=20208897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,559:0,34,255:13,0 chr1 20208898 . C . PASS END=20208906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:14,0 chr1 20208907 . G . PASS END=20208958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 20208959 . G . PASS END=20208980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,302:0,24,255:9,0 chr1 20208981 . G . PASS END=20208992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 20208993 . T . PASS END=20209077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 20209078 . G . PASS END=20209129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 20209130 . G . PASS END=20209150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 20209151 . T . PASS END=20209174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,186:0,15,186:6,0 chr1 20209175 . G . LowGQ END=20209175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 20209176 . C . PASS END=20209189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 20209190 . G . LowGQ END=20209190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 20209191 . C . PASS END=20209192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 20209193 . C . LowGQ END=20209193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 20209194 . T . PASS END=20209201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 20209202 . A . LowGQ END=20209202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 20209203 . A . PASS END=20209227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 20216878 . C . PASS END=20217026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:37:0,93,1395:0,111,255:40,0 chr1 20220861 . T . PASS END=20220870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:64:23:0,64,931:0,64,255:26,0 chr1 20220871 . G . PASS END=20220880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:31,0 chr1 20220881 . G . PASS END=20220881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:45:31:0,45,958:0,45,255:29,0 chr1 20220882 . G . PASS END=20220882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 20220883 . T . PASS END=20220883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 20220884 . A . PASS END=20220963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1053:0,80,255:37,0 chr1 20220964 . T . PASS END=20220964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:27,0 chr1 20220965 . T . PASS END=20220973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 20224033 . A . PASS END=20224034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 20224035 . T . PASS END=20224035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 20224036 . C . PASS END=20224038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr1 20224039 . G . PASS END=20224039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,805:0,56,255:23,0 chr1 20224040 . G . PASS END=20224044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 20224045 . G . PASS END=20224150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1155:0,80,255:40,0 chr1 20224151 . C . PASS END=20224155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:24,0 chr1 20230760 . T . PASS END=20230770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1280:0,87,255:40,0 chr1 20230771 . T . PASS END=20230771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1313:0,62,255:39,0 chr1 20230772 . C . PASS END=20230795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:44:0,94,1448:0,94,255:40,0 chr1 20230796 . G . PASS END=20230796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,7:52:39:52:0,39,1340:0,39,255:40,0 chr1 20230797 . A . PASS END=20230811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:52:0,120,1800:0,121,255:40,0 chr1 20230812 . A . PASS END=20230812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,8:63:55:63:0,55,1363:0,55,255:40,0 chr1 20230813 . G . PASS END=20230891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:56:0,120,1800:0,137,255:40,0 chr1 20231384 . G . PASS END=20231480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:66:0,120,1800:0,182,255:40,0 chr1 20232925 . A . PASS END=20232925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 20232926 . T . PASS END=20232929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 20232930 . G . PASS END=20232931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 20232932 . A . PASS END=20232932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 20232933 . G . PASS END=20232936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 20232937 . A . PASS END=20232937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 20232938 . T . PASS END=20232956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,762:0,66,255:26,0 chr1 20232957 . G . PASS END=20233109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,1000:0,81,255:40,0 chr1 20234063 . G . PASS END=20234239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:33:0,84,1260:0,97,255:40,0 chr1 20246800 . T . PASS END=20246802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 20246803 . G . PASS END=20246803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 20246804 . C . PASS END=20246805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 20246806 . G . PASS END=20246942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:28:0,83,1049:0,83,255:40,0 chr1 20248791 . C . PASS END=20248791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 20248792 . G . PASS END=20248794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 20248795 . G . PASS END=20248795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,1 chr1 20248796 . A . PASS END=20248796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:31:22:0,31,763:0,31,255:21,1 chr1 20248797 . A . PASS END=20248797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:22,0 chr1 20248798 . A . PASS END=20248809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:23,0 chr1 20248810 . G . PASS END=20248810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 20248811 . C . PASS END=20248825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,785:0,66,255:23,0 chr1 20248826 . T . PASS END=20248826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 20248827 . A . PASS END=20248832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr1 20248833 . C . PASS END=20248833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 20248834 . C . PASS END=20248839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 20248840 . G . PASS END=20248840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 20248841 . G . PASS END=20248843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 20248844 . T . PASS END=20248844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 20248845 . C . PASS END=20248864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,799:0,66,255:22,0 chr1 20248865 . C . PASS END=20248881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:18,0 chr1 20248882 . G . PASS END=20248882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 20248883 . T . PASS END=20248897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 20249110 . C . PASS END=20249118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:32:0,96,1158:0,96,255:38,0 chr1 20249119 . T . PASS END=20249119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1262:0,75,255:37,0 chr1 20249120 . G . PASS END=20249248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,108,1437:0,108,255:40,0 chr1 20250013 . C . PASS END=20250019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1157:0,80,255:32,0 chr1 20250020 . G . PASS END=20250020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:31,0 chr1 20250021 . C . PASS END=20250052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1125:0,82,255:34,0 chr1 20302194 . T . PASS END=20302316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:83:37:0,83,1360:0,83,255:40,0 chr1 20302317 . T . PASS END=20302317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1372:0,65,255:33,0 chr1 20302318 . C . PASS END=20302318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1427:0,82,255:34,0 chr1 20302319 . T . PASS END=20302319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1304:0,45,255:31,0 chr1 20302320 . G . PASS END=20302323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:32,0 chr1 20302324 . G . PASS END=20302324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 20302325 . A . PASS END=20302327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1160:0,66,255:28,0 chr1 20302328 . C . PASS END=20302336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,92,255:30,0 chr1 20304508 . C . PASS END=20304614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,108,1620:0,119,255:40,0 chr1 20304873 . C . PASS END=20304887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 20304888 . T . PASS END=20304889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 20304890 . G . PASS END=20304896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 20304897 . C . PASS END=20304897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 20304898 . C . PASS END=20304898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 20304899 . T . PASS END=20304924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1031:0,81,255:36,0 chr1 20304925 . C . PASS END=20304961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1233:0,86,255:37,0 chr1 20304962 . C G, 48.98 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=2.948;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:12,9,0:7,6,0:48:84,0,50,534,680,1214:255,0,255:19,0:4.8979e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,11,10,5:7,12,10,5 chr1 20304963 . G . PASS END=20304982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1170:0,83,255:33,0 chr1 20304983 . G . PASS END=20304983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 20304984 . A . PASS END=20304994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1164:0,93,255:31,0 chr1 20304995 . A . PASS END=20304995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 20304996 . T . PASS END=20304999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 20305000 . C . PASS END=20305001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr1 20305002 . T . PASS END=20305009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:26,0 chr1 20305010 . C . PASS END=20305011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:27,0 chr1 20305012 . G . PASS END=20305015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 20305016 . G . PASS END=20305017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20305227 . C . PASS END=20305266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:48:0,120,1800:0,120,255:40,0 chr1 20395443 . A . PASS END=20395525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,135,255:40,0 chr1 20411314 . A . PASS END=20411331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,158,255:40,0 chr1 20411332 . C T, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.516;ReadPosRankSum=0.374;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,31,0:0.534,0.000:58:16,11,0:11,20,0:48:85,0,50,1005,962,1968:255,0,255:26,0:5.0000e+01,6.6786e-05,5.2709e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,10,18,13:12,15,14,17 chr1 20411333 . C . PASS END=20411363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,139,255:40,0 chr1 20412576 . G . PASS END=20412576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 20412577 . T . PASS END=20412577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 20412578 . G . PASS END=20412687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1125:0,80,255:40,0 chr1 20412688 . C . PASS END=20412706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:26,0 chr1 20412707 . G . PASS END=20412708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,815:0,41,255:20,0 chr1 20412709 . T . PASS END=20412714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 20412715 . C . PASS END=20412720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:18,0 chr1 20416282 . G . PASS END=20416282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 20416283 . T . PASS END=20416283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 20416284 . G . PASS END=20416285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 20416286 . T . PASS END=20416286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 20416287 . G . PASS END=20416288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 20416289 . T . PASS END=20416290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 20416291 . G . PASS END=20416373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1164:0,83,255:37,0 chr1 20416374 . G . PASS END=20416383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 20416384 . C . PASS END=20416384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20416385 . T . PASS END=20416388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:25,0 chr1 20417061 . A . PASS END=20417185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1440:0,100,255:40,0 chr1 20440607 . C . PASS END=20440706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:34:0,92,1194:0,92,255:40,0 chr1 20440707 . T . PASS END=20440707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1305:0,73,255:34,0 chr1 20440708 . T . PASS END=20440723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,92,255:35,0 chr1 20440724 . C . PASS END=20440725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1241:0,86,255:29,0 chr1 20440726 . G . PASS END=20440737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,80,255:26,0 chr1 20440738 . A . PASS END=20440739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:25:0,42,890:0,42,255:21,0 chr1 20440740 . C . PASS END=20440744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:23,0 chr1 20440745 . C . PASS END=20440747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 20440748 . G . PASS END=20440752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr1 20442000 . A . PASS END=20442016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1180:0,93,255:38,0 chr1 20442017 . T . PASS END=20442053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:38:0,98,1376:0,98,255:40,0 chr1 20442054 . T C, 172.01 PASS DP=42;MQ=249.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,21,0:0,21,0:122:210,125,0,310,310,310:255,126,0:0,0:1.7201e+02,1.2201e+02,0.0000e+00,3.0678e+02,3.4155e+02,3.0979e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,23:0,0,20,22 chr1 20442055 . G . PASS END=20442091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:42:0,87,1498:0,87,255:40,0 chr1 20442092 . T . PASS END=20442106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:40,0 chr1 20442826 . C . PASS END=20442844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,804:0,66,255:26,0 chr1 20442845 . G . PASS END=20442970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,926:0,81,255:40,0 chr1 20445952 . C . PASS END=20445985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:39:0,97,1412:0,97,255:40,0 chr1 20445986 . T . PASS END=20445986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:35,0 chr1 20445987 . T . PASS END=20445991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:98:36:0,98,1357:0,98,255:35,0 chr1 20465921 . A . PASS END=20465921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 20465922 . T . PASS END=20465922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 20465923 . G . PASS END=20465930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 20465931 . G . PASS END=20465934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 20465935 . A . PASS END=20465935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 20465936 . A . PASS END=20465951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,454:0,42,255:19,0 chr1 20465952 . G . PASS END=20465952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 20465953 . G . PASS END=20465958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 20465959 . A . PASS END=20465959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:17,0 chr1 20465960 . A . PASS END=20466000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 20466001 . A . PASS END=20466036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 20466659 . G . PASS END=20466659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 20466660 . T . PASS END=20466660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 20466661 . C . PASS END=20466680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1131:0,84,255:30,0 chr1 20466681 . T . PASS END=20466681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 20466682 . T . PASS END=20466683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 20466684 . T . PASS END=20466684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 20466685 . T . PASS END=20466689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1147:0,90,255:30,0 chr1 20466690 . G . PASS END=20466690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 20466691 . T . PASS END=20466703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1039:0,84,255:28,0 chr1 20466704 . T . PASS END=20466704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 20466705 . G . PASS END=20466706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20466707 . C . PASS END=20466711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 20469939 . T . PASS END=20469953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,441:0,36,255:13,0 chr1 20469954 . A . PASS END=20469954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 20469955 . C . PASS END=20469994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:19,0 chr1 20469995 . A . PASS END=20470004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 20470005 . G . PASS END=20470005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 20470006 . C . PASS END=20470006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 20470007 . G . PASS END=20470007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 20470008 . C . PASS END=20470008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 20470009 . C . PASS END=20470009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 20470010 . A . PASS END=20470029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 20470030 . C . PASS END=20470030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 20470031 . G . PASS END=20470033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 20470034 . T . PASS END=20470045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,737:0,49,255:18,0 chr1 20470046 . C . PASS END=20470049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20470050 . G . PASS END=20470078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:19,0 chr1 20470079 . G . PASS END=20470083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 20471073 . G . PASS END=20471082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 20471083 . G . PASS END=20471089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 20471090 . A . PASS END=20471090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 20471091 . C . PASS END=20471094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 20471095 . T . PASS END=20471095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 20471096 . G . PASS END=20471145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1109:0,80,255:33,0 chr1 20471146 . G . PASS END=20471163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1014:0,68,255:26,0 chr1 20471164 . A . PASS END=20471166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:22,0 chr1 20471167 . A . PASS END=20471176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:22,0 chr1 20471177 . T . PASS END=20471182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,713:0,47,255:19,0 chr1 20474683 . G . PASS END=20474830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1125:0,80,255:40,0 chr1 20474831 . T . PASS END=20474832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 20474833 . A . PASS END=20474835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 20474836 . C . PASS END=20474848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,74,255:25,0 chr1 20474849 . G . PASS END=20474882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,47,255:19,0 chr1 20474883 . G . PASS END=20474883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:15,0 chr1 20474884 . C . PASS END=20474885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 20474886 . C . PASS END=20474894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,495:0,31,255:12,0 chr1 20476286 . G . PASS END=20476300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:19,0 chr1 20476301 . C . PASS END=20476316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 20476317 . G . PASS END=20476317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 20476318 . C . PASS END=20476320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 20476321 . C . PASS END=20476321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 20476322 . A . PASS END=20476323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr1 20476324 . C . PASS END=20476324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 20476325 . T . PASS END=20476337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr1 20476338 . C . PASS END=20476342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20476343 . A . PASS END=20476353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1030:0,68,255:26,0 chr1 20476354 . C . PASS END=20476354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20476355 . C . PASS END=20476356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 20476357 . A . PASS END=20476358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20476359 . C . PASS END=20476361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr1 20476362 . C . PASS END=20476370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20476371 . C . PASS END=20476371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 20476372 . A . PASS END=20476372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20476373 . C . PASS END=20476373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 20476374 . T . PASS END=20476376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20476377 . A . PASS END=20476377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 20476378 . G . PASS END=20476378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,895:0,45,255:25,0 chr1 20476379 . C . PASS END=20476390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 20476391 . C T, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,10,0:0,16,0:75:163,78,0,1000,78,1000:255,81,0:0,0:1.2525e+02,7.5250e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,16:0,0,14,12 chr1 20476392 . G . PASS END=20476416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,906:0,62,255:25,0 chr1 20476417 . G . PASS END=20476418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,828:0,42,255:24,0 chr1 20476419 . C . PASS END=20476421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 20476422 . G . PASS END=20476422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 20476423 . C . PASS END=20476428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr1 20476429 . C . PASS END=20476440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 20476441 . A . PASS END=20476444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20476445 . T . PASS END=20476456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 20476457 . G . PASS END=20476477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:18,0 chr1 20476478 . A . PASS END=20476478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 20476479 . G . PASS END=20476482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 20476483 . G . PASS END=20476483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:11,0 chr1 20476484 . C . PASS END=20476488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 20476489 . G . PASS END=20476503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,341:0,27,255:9,0 chr1 20476504 . A . PASS END=20476504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:8,0 chr1 20476505 . A . PASS END=20476521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 20489753 . C . PASS END=20489772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 20489773 . G . PASS END=20489784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 20489785 . C . PASS END=20489785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 20489786 . T . PASS END=20489789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 20490484 . C . PASS END=20490517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1327:0,95,255:40,0 chr1 20490518 . T C, 184.98 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,17,0:0,29,0:135:223,138,0,1738,138,1738:255,138,0:0,0:1.8498e+02,1.3498e+02,0.0000e+00,4.5000e+02,1.6975e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,13:0,0,18,28 chr1 20490519 . G . PASS END=20490555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,133,255:40,0 chr1 20490556 . C . PASS END=20490626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:39:0,90,1350:0,107,255:40,0 chr1 20490627 . C . PASS END=20490627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:32,0 chr1 20490628 . A . PASS END=20490630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 20490631 . A . PASS END=20490650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:26:0,66,990:0,78,255:25,0 chr1 20499287 . A . PASS END=20499287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 20499288 . A . PASS END=20499288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 20499289 . A . PASS END=20499289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,794:0,72,255:29,0 chr1 20499290 . C . PASS END=20499368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1135:0,80,255:38,0 chr1 20499369 . A . PASS END=20499369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:28,0 chr1 20499370 . G . PASS END=20499374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 20499375 . A . PASS END=20499375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 20499376 . G . PASS END=20499384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 20499385 . C . PASS END=20499390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,74,255:24,0 chr1 20501500 . C . PASS END=20501500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20501501 . T . PASS END=20501501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 20501502 . G . PASS END=20501503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 20501504 . C . PASS END=20501504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 20501505 . A . PASS END=20501513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 20501514 . C . PASS END=20501515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 20501516 . C . PASS END=20501523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,786:0,66,255:24,0 chr1 20501524 . C . PASS END=20501524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 20501525 . C . PASS END=20501527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 20501528 . T . PASS END=20501528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 20501529 . A . PASS END=20501534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 20501535 . A . PASS END=20501535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 20501536 . A . PASS END=20501541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1003:0,84,255:31,0 chr1 20501542 . C . PASS END=20501542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 20501543 . A . PASS END=20501770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,81,255:40,1 chr1 20501771 . C . PASS END=20501773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:33:0,64,1125:0,64,255:25,0 chr1 20503817 . A . PASS END=20503856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:35:0,99,1396:0,99,255:40,0 chr1 20517055 . A . PASS END=20517061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,668:0,41,255:19,0 chr1 20517062 . C . PASS END=20517076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:26,0 chr1 20517077 . A . PASS END=20517077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 20517078 . T . PASS END=20517078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr1 20517079 . A . PASS END=20517086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1064:0,90,255:31,0 chr1 20517087 . A . PASS END=20517087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 20517088 . C . PASS END=20517286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:32:0,82,1218:0,82,255:40,0 chr1 20517287 . A . PASS END=20517287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:35,0 chr1 20517288 . A . PASS END=20517310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1319:0,84,255:38,0 chr1 20517311 . A . PASS END=20517311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr1 20517312 . A . PASS END=20517339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:97:35:0,97,1252:0,97,255:36,0 chr1 20517340 . A . PASS END=20517340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1182:0,78,255:34,0 chr1 20517341 . T . PASS END=20517871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:34:0,84,1350:0,84,255:40,0 chr1 20517872 . T . PASS END=20517872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:30,0 chr1 20517873 . G . PASS END=20517875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 20517876 . A . PASS END=20517876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 20517877 . G . PASS END=20517886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:30,0 chr1 20517887 . G . PASS END=20517887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:25,0 chr1 20517888 . G . PASS END=20517889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 20517890 . G . PASS END=20517897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:25,0 chr1 20637095 . A . PASS END=20637095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 20637096 . T . PASS END=20637104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 20637105 . T . PASS END=20637105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr1 20637106 . G . PASS END=20637108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 20637109 . G . PASS END=20637229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1202:0,83,255:40,0 chr1 20637230 . C . PASS END=20637233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,89,255:26,0 chr1 20639329 . G . PASS END=20639370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,709:0,63,255:26,0 chr1 20639371 . G . PASS END=20639377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 20639378 . G . PASS END=20639389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1022:0,68,255:26,0 chr1 20639390 . C . PASS END=20639395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 20639396 . T . PASS END=20639396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 20639397 . G . PASS END=20639402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:30,0 chr1 20639403 . A . PASS END=20639403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 20639404 . C . PASS END=20639409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20639410 . A . PASS END=20639427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr1 20639428 . A . PASS END=20639428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 20639429 . G . PASS END=20639440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,64,255:23,0 chr1 20639441 . C . PASS END=20639473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,47,255:19,0 chr1 20639474 . A . PASS END=20639474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 20639475 . G . PASS END=20639476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 20639477 . C . PASS END=20639481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 20640815 . G . PASS END=20640846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,886:0,62,255:26,0 chr1 20640847 . C . PASS END=20640849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 20640850 . C . PASS END=20640852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 20640853 . T . PASS END=20640853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,966:0,59,255:28,0 chr1 20640854 . C . PASS END=20640856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 20640857 . G . PASS END=20640857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 20640858 . C . PASS END=20640867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1103:0,90,255:31,0 chr1 20640868 . A . PASS END=20640868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 20640869 . A . PASS END=20640885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1249:0,89,255:33,0 chr1 20640886 . G . PASS END=20640886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 20640887 . A . PASS END=20640916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1197:0,88,255:35,0 chr1 20640917 . T . PASS END=20640917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:28,0 chr1 20640918 . G . PASS END=20640928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:29,0 chr1 20640929 . C . PASS END=20640936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 20640937 . G . PASS END=20640939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 20640940 . A . PASS END=20640973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,889:0,67,255:26,0 chr1 20640974 . T . PASS END=20640982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 20640983 . T . PASS END=20640983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:16,0 chr1 20640984 . G . PASS END=20640996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:18,0 chr1 20640997 . G . PASS END=20641007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:15:0,39,585:0,45,255:13,0 chr1 20641008 . T . PASS END=20641008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 20641009 . C . PASS END=20641026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:13,0 chr1 20641027 . C . PASS END=20641027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 20641028 . C . PASS END=20641032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 20641033 . G . PASS END=20641033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 20641034 . T . PASS END=20641075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 20641076 . A . PASS END=20641085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 20644023 . C . PASS END=20644032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,52,255:22,0 chr1 20644033 . C . PASS END=20644045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:26,0 chr1 20644046 . C . PASS END=20644055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 20644056 . G . PASS END=20644056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 20644057 . G . PASS END=20644062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 20644063 . T . PASS END=20644063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 20644064 . G . PASS END=20644128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1063:0,83,255:37,0 chr1 20644129 . A . PASS END=20644129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:26,0 chr1 20644130 . A . PASS END=20644141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 20644142 . A . PASS END=20644151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,978:0,70,255:28,0 chr1 20644152 . G . PASS END=20644152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:22,0 chr1 20644153 . C . PASS END=20644154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:23,0 chr1 20644155 . A . PASS END=20644155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,808:0,31,255:21,0 chr1 20644156 . T . PASS END=20644159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:23,0 chr1 20644160 . T . PASS END=20644160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 20644161 . G . PASS END=20644164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:24,0 chr1 20644165 . G . PASS END=20644165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 20644166 . C . PASS END=20644166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:21,0 chr1 20644167 . A . PASS END=20644167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 20644168 . G . PASS END=20644168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 20644917 . G . PASS END=20645214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:39:0,84,1260:0,90,255:40,0 chr1 20645875 . A . PASS END=20645999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:39:0,81,1352:0,81,255:40,0 chr1 20649248 . A . PASS END=20649254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr1 20649255 . G A, 50.00 PASS DP=45;MQ=249.35;MQRankSum=4.784;ReadPosRankSum=1.518;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,27,0:0.600,0.000:45:8,15,0:10,12,0:47:85,0,47,950,644,1593:255,0,255:17,0:5.0000e+01,9.2155e-05,4.9505e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,16,11:14,4,10,17 chr1 20649256 . A . PASS END=20649265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1360:0,93,255:40,0 chr1 20649849 . A . PASS END=20649851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 20649852 . G . PASS END=20650019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,95,255:40,0 chr1 20650020 . G . PASS END=20650025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:32:0,72,1080:0,80,255:26,0 chr1 20654383 . G . PASS END=20654493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,120,1800:0,151,255:40,0 chr1 20656673 . G . PASS END=20656694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:32:0,93,1210:0,95,255:37,0 chr1 20656695 . A . PASS END=20656695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:36,0 chr1 20656696 . T . PASS END=20656875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1215:0,80,255:40,0 chr1 20657362 . G . PASS END=20657362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 20657363 . T . PASS END=20657382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,887:0,75,255:26,0 chr1 20657383 . A . PASS END=20657389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 20657390 . G . PASS END=20657390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20657391 . T . PASS END=20657399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 20657400 . G . PASS END=20657423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 20657424 . T . PASS END=20657424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 20657425 . G . PASS END=20657431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 20657432 . G . PASS END=20657442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:25,0 chr1 20657443 . G . PASS END=20657443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:24,0 chr1 20657444 . C . PASS END=20657460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,901:0,72,255:25,0 chr1 20657461 . G . PASS END=20657476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:19:0,49,684:0,49,255:20,0 chr1 20659259 . A . PASS END=20659259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 20659260 . T . PASS END=20659260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 20659261 . G . PASS END=20659266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,618:0,60,255:21,0 chr1 20659267 . A . PASS END=20659267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 20659268 . T . PASS END=20659268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 20659269 . C . PASS END=20659269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 20659270 . C . PASS END=20659270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 20659271 . T . PASS END=20659271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 20659272 . T . PASS END=20659291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,695:0,66,255:26,0 chr1 20659292 . G . PASS END=20659293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 20659294 . C . PASS END=20659294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 20659295 . C . PASS END=20659342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1160:0,83,255:35,0 chr1 20659343 . C . PASS END=20659343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1237:0,77,255:34,0 chr1 20659344 . T . PASS END=20659396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:36:0,94,1258:0,94,255:40,0 chr1 20659397 . T . PASS END=20659397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:31,0 chr1 20659398 . A . PASS END=20659410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1332:0,92,255:33,0 chr1 20659411 . T . PASS END=20659411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:29,0 chr1 20659412 . G . PASS END=20659424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 20659425 . A . PASS END=20659425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 20659426 . C . PASS END=20659426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:25,0 chr1 20659427 . A . PASS END=20659444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,853:0,66,255:26,0 chr1 20662796 . G . PASS END=20662812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:35:0,83,1175:0,83,255:37,0 chr1 20662813 . C . PASS END=20662813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:37,0 chr1 20662814 . A . PASS END=20662979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:36:0,80,1327:0,80,255:40,0 chr1 20664139 . A . PASS END=20664160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1148:0,83,255:37,0 chr1 20664161 . G . PASS END=20664317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:39:0,87,1410:0,87,255:40,0 chr1 20664318 . A . PASS END=20664318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:34,0 chr1 20664319 . T . PASS END=20664329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1363:0,95,255:35,0 chr1 20664468 . G . PASS END=20664492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,114,1751:0,114,255:40,0 chr1 20664493 . A . PASS END=20664527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,126,255:40,0 chr1 20668925 . C . PASS END=20668946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,643:0,51,255:19,0 chr1 20668947 . A . PASS END=20668967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 20668968 . T . PASS END=20668968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 20668969 . C . PASS END=20669020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:25,0 chr1 20669021 . T . PASS END=20669021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:20,0 chr1 20669022 . T . PASS END=20669034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 20669035 . C . PASS END=20669035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 20669036 . C . PASS END=20669039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 20669040 . A . PASS END=20669041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 20669042 . A . PASS END=20669045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 20669046 . A . PASS END=20669047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 20669048 . G . PASS END=20669053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 20669054 . A . PASS END=20669054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 20669055 . G . PASS END=20669055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 20669056 . C . PASS END=20669057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 20669058 . C . PASS END=20669058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:16,0 chr1 20669059 . T . PASS END=20669083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:17,0 chr1 20669084 . C . PASS END=20669084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr1 20669085 . G . PASS END=20669086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 20669087 . A . PASS END=20669087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 20669088 . G . PASS END=20669102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr1 20669572 . A . PASS END=20669579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 20669580 . C . PASS END=20669582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 20669583 . C . PASS END=20669583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 20669584 . A . PASS END=20669584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 20669585 . T . PASS END=20669585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 20669586 . C . PASS END=20669600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:17,0 chr1 20669601 . A . PASS END=20669601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:16,0 chr1 20669602 . C . PASS END=20669615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,538:0,51,255:18,0 chr1 20669616 . G . PASS END=20669616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 20669617 . A . PASS END=20669625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:17,0 chr1 20669626 . C . PASS END=20669629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:21,0 chr1 20669630 . A . PASS END=20669630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 20669631 . G . PASS END=20669633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 20669634 . G . PASS END=20669634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 20669635 . A . PASS END=20669642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr1 20669643 . G . PASS END=20669643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 20669644 . A . PASS END=20669644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20669645 . G . PASS END=20669645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:17,0 chr1 20669646 . C . PASS END=20669650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 20669651 . C . PASS END=20669651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20669652 . A . PASS END=20669662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,759:0,47,255:19,0 chr1 20669663 . G . PASS END=20669663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:18,0 chr1 20669664 . C . PASS END=20669664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 20669665 . C . PASS END=20669665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 20669666 . C . PASS END=20669666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 20669667 . G . PASS END=20669696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,668:0,43,255:19,0 chr1 20669697 . C . PASS END=20669698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 20669699 . G . PASS END=20669699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 20669700 . G . PASS END=20669753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,839:0,61,255:24,0 chr1 20669754 . G . PASS END=20669757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 20669758 . C . PASS END=20669765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 20669766 . C . PASS END=20669795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,698:0,53,255:20,0 chr1 20669796 . C . PASS END=20669805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 20669806 . A . PASS END=20669806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 20669807 . G . PASS END=20669846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 20669847 . T . PASS END=20669847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr1 20669848 . T . PASS END=20669854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 20669855 . G . PASS END=20669855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 20669856 . C . PASS END=20669876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 20669877 . A . PASS END=20669886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 20671949 . G . PASS END=20671949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 20671950 . G . PASS END=20671952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 20671953 . C . PASS END=20671953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 20671954 . A . PASS END=20671967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,554:0,48,255:19,0 chr1 20671968 . A . PASS END=20671970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 20671971 . G . PASS END=20671974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 20671975 . G . PASS END=20671987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,862:0,66,255:24,0 chr1 20671988 . G . PASS END=20671988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 20671989 . C . PASS END=20671996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,848:0,72,255:26,0 chr1 20671997 . G . PASS END=20671998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 20671999 . A . PASS END=20671999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 20672000 . A . PASS END=20672001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 20672002 . A . PASS END=20672002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 20672003 . T . PASS END=20672005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 20672006 . T . PASS END=20672007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 20672008 . A . PASS END=20672016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 20672017 . A . PASS END=20672017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 20672018 . C . PASS END=20672019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 20672020 . G . PASS END=20672020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 20672021 . C . PASS END=20672048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1073:0,90,255:31,0 chr1 20672049 . C . PASS END=20672074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:27,0 chr1 20672075 . A . PASS END=20672075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 20672076 . C . PASS END=20672079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 20672080 . A . PASS END=20672080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 20672081 . A . PASS END=20672083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 20672084 . C . PASS END=20672085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,714:0,46,255:19,0 chr1 20672086 . G . PASS END=20672086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20673105 . G . PASS END=20673136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,192,255:40,0 chr1 20674738 . G . PASS END=20674739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 20674740 . G . PASS END=20674740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 20674741 . C . PASS END=20674744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 20674745 . C . PASS END=20674745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 20674746 . C . PASS END=20674747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 20674748 . G . PASS END=20674749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 20674750 . G . PASS END=20674752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:27,0 chr1 20674753 . T . PASS END=20674758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 20674759 . G . PASS END=20674759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 20674760 . C . PASS END=20674760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:28,0 chr1 20674761 . T . PASS END=20674767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,965:0,87,255:29,0 chr1 20674768 . C . PASS END=20674768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 20674769 . C . PASS END=20674771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 20674772 . G . PASS END=20674772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,978:0,56,255:26,0 chr1 20674773 . G . PASS END=20674777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 20674778 . A . PASS END=20674779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1031:0,71,255:28,0 chr1 20674780 . A . PASS END=20674783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 20674784 . G . PASS END=20674784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 20674785 . A . PASS END=20674796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 20674797 . T . PASS END=20674797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 20674798 . C . PASS END=20674799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 20674800 . G . PASS END=20674800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 20674801 . G . PASS END=20674804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 20674805 . T . PASS END=20674805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 20674806 . G . PASS END=20674810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 20674811 . G . PASS END=20674811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:28,0 chr1 20674812 . C . PASS END=20674830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 20674831 . A . PASS END=20674831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,967:0,54,255:27,0 chr1 20674832 . A . PASS END=20674832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 20674833 . G . PASS END=20674835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 20674836 . T . PASS END=20674836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 20674837 . C . PASS END=20674840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 20674841 . A . PASS END=20674841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr1 20674842 . C . PASS END=20674847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 20674848 . A . PASS END=20674848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 20674849 . A . PASS END=20674853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 20674854 . A . PASS END=20674854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 20674855 . A . PASS END=20674855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20674856 . A . PASS END=20674856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 20674857 . T . PASS END=20674861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20674862 . G . PASS END=20674869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr1 20675591 . G . PASS END=20675751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:39:0,81,1215:0,107,255:40,0 chr1 20675752 . C . PASS END=20675766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:26,0 chr1 20676649 . A . PASS END=20676657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:25,0 chr1 20676658 . C . PASS END=20676658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 20676659 . A . PASS END=20676662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 20676663 . C . PASS END=20676683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 20676684 . G . PASS END=20676688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 20676689 . G . PASS END=20676696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,947:0,67,255:26,0 chr1 20676697 . G . PASS END=20676697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,900:0,37,255:22,0 chr1 20676698 . C . PASS END=20676699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:24,0 chr1 20676700 . G A, 50.00 PASS DP=28;MQ=248.96;MQRankSum=3.869;ReadPosRankSum=1.152;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:7,5,0:6,10,0:48:85,0,50,526,436,962:255,0,255:13,0:5.0000e+01,6.7304e-05,5.2620e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,7,8:8,5,9,6 chr1 20676701 . C . PASS END=20676715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 20676716 . T . PASS END=20676716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 20676717 . T . PASS END=20676723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr1 20677350 . G . PASS END=20677361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 20677362 . G . PASS END=20677378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:31,0 chr1 20677379 . C . PASS END=20677379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 20677380 . T . PASS END=20677394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:30,0 chr1 20677395 . C . PASS END=20677400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 20677401 . A . PASS END=20677402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20677403 . A . PASS END=20677405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 20677406 . C . PASS END=20677406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20677407 . T . PASS END=20677407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr1 20677408 . C . PASS END=20677409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20677410 . T . PASS END=20677419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,901:0,64,255:26,0 chr1 20678548 . G . PASS END=20678555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 20678556 . T . PASS END=20678556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:29,0 chr1 20678557 . C . PASS END=20678557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 20678558 . A . PASS END=20678559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 20678560 . C . PASS END=20678650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1127:0,83,255:37,0 chr1 20678651 . G . PASS END=20678661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,71,255:25,0 chr1 20678662 . T . PASS END=20678662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 20678663 . C . PASS END=20678663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 20678664 . T . PASS END=20678665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 20680250 . G . PASS END=20680250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 20680251 . T . PASS END=20680251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 20680252 . G . PASS END=20680308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,576:0,45,255:19,0 chr1 20680309 . G . PASS END=20680311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 20680312 . C . PASS END=20680315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 20680316 . C . PASS END=20680321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 20680322 . G . PASS END=20680322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 20680323 . A . PASS END=20680332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:20,0 chr1 20680333 . G . PASS END=20680335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 20680336 . G . PASS END=20680358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 20680359 . G . PASS END=20680362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 20680363 . G . PASS END=20680363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20680364 . T . PASS END=20680365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 20680366 . C . PASS END=20680376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 20680377 . G . PASS END=20680377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 20680378 . C . PASS END=20680381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20680382 . T . PASS END=20680491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,651:0,44,255:19,0 chr1 20680492 . G . PASS END=20680512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,808:0,63,255:23,0 chr1 20680513 . C . PASS END=20680514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20680515 . C . PASS END=20680515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 20680516 . T . PASS END=20680519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20680520 . A . PASS END=20680560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,886:0,61,255:26,0 chr1 20680561 . C . PASS END=20680561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20680562 . A . PASS END=20680562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 20680563 . G . PASS END=20680570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 20680571 . T . PASS END=20680598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,854:0,61,255:25,0 chr1 20680599 . C . PASS END=20680599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 20680600 . T . PASS END=20680617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,848:0,62,255:26,0 chr1 20680618 . G . PASS END=20680624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 20680625 . C . PASS END=20680631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,70,255:26,0 chr1 20680632 . A . PASS END=20680632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:23,0 chr1 20680633 . A . PASS END=20680666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,62,255:24,0 chr1 20680667 . G . PASS END=20680667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 20680668 . C . PASS END=20680671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 20680672 . T . PASS END=20680672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 20680673 . G . PASS END=20680679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 20680680 . A . PASS END=20680680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 20680681 . G . PASS END=20680682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 20680683 . T . PASS END=20680683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 20680684 . G . PASS END=20680688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,638:0,60,255:20,0 chr1 20680689 . T . PASS END=20680689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 20680690 . G . PASS END=20680690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 20680691 . C . PASS END=20680694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 20680695 . T . PASS END=20680695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr1 20680696 . G . PASS END=20680722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:16:0,43,590:0,43,255:19,0 chr1 20680723 . C . PASS END=20680729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 20680730 . C . PASS END=20680730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr1 20680731 . T . PASS END=20680731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 20680732 . C . PASS END=20680737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 20680738 . T . PASS END=20680738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,458:0,6,255:13,0 chr1 20680739 . A . PASS END=20680741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 20680742 . C . PASS END=20680742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr1 20680743 . C . PASS END=20680743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 20680744 . G . PASS END=20680746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 20680747 . T . PASS END=20680747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 20680748 . T . PASS END=20680748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 20680749 . A . PASS END=20680749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:9,0 chr1 20680750 . T . PASS END=20680756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 20810142 . T . PASS END=20810172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:43:0,96,1375:0,96,255:40,2 chr1 20810173 . T . PASS END=20810174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:65:44:0,65,1432:0,65,255:40,2 chr1 20810175 . T . PASS END=20810182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,116,1603:0,116,255:40,0 chr1 20810183 . C . PASS END=20810183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1362:0,73,255:40,0 chr1 20810184 . G . PASS END=20810212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,102,1530:0,114,255:40,0 chr1 20811707 . C . PASS END=20811769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 20811770 . A . LowGQ END=20811770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:4,0,255:8,0 chr1 20811771 . G . PASS END=20811803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,252:0,24,252:9,0 chr1 20811804 . C . PASS END=20811859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 20811860 . G . PASS END=20811872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,108:0,9,108:3,0 chr1 20827183 . T . PASS END=20827184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 20827185 . A . PASS END=20827185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 20827186 . G . PASS END=20827186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 20827187 . C . PASS END=20827191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:18,0 chr1 20827192 . G . PASS END=20827197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:21,0 chr1 20827198 . G . PASS END=20827198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 20827199 . G . PASS END=20827200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 20827201 . T . PASS END=20827201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 20827202 . A . PASS END=20827204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 20827205 . A . PASS END=20827205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,650:0,30,255:22,0 chr1 20827206 . C . PASS END=20827213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr1 20827214 . A . PASS END=20827214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 20827215 . T . PASS END=20827224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:26,0 chr1 20827225 . G . PASS END=20827229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 20827230 . T . PASS END=20827230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 20827231 . A . PASS END=20827238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 20827239 . T . PASS END=20827239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 20827240 . C . PASS END=20827244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1123:0,90,255:30,0 chr1 20827245 . G . PASS END=20827245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:28,0 chr1 20827246 . C . PASS END=20827252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 20827253 . A . PASS END=20827254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 20827255 . G . PASS END=20827278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1203:0,93,255:34,0 chr1 20827279 . A . PASS END=20827279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:31,0 chr1 20827280 . C . PASS END=20827362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1014:0,83,255:33,0 chr1 20827363 . C . PASS END=20827405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,925:0,69,255:26,0 chr1 20827406 . A . PASS END=20827407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 20827408 . C . PASS END=20827414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 20827415 . T . PASS END=20827415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 20827416 . G . PASS END=20827418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 20827419 . T . PASS END=20827464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,559:0,41,255:19,0 chr1 20827465 . G . PASS END=20827466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 20827467 . G . PASS END=20827467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 20827468 . A . PASS END=20827468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 20827469 . A . PASS END=20827471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 20827472 . A . PASS END=20827478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:17:0,39,585:0,40,255:13,0 chr1 20827479 . G . PASS END=20827535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,495:0,42,255:18,0 chr1 20827536 . T . PASS END=20827536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 20827537 . C . PASS END=20827564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,560:0,48,255:16,0 chr1 20827565 . A . PASS END=20827565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 20827566 . A . PASS END=20827573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 20827574 . C . PASS END=20827574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:17,0 chr1 20827575 . T . PASS END=20827579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 20827580 . A . PASS END=20827585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:23,0 chr1 20827586 . T . PASS END=20827586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 20827587 . A . PASS END=20827602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,878:0,75,255:25,0 chr1 20827603 . G . PASS END=20827603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 20827604 . G . PASS END=20827652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:26,0 chr1 20827653 . C . PASS END=20827688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1034:0,90,255:31,0 chr1 20827689 . T . PASS END=20827689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr1 20827690 . C . PASS END=20827690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1304:0,105,255:35,0 chr1 20827691 . T . PASS END=20827691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1150:0,66,255:34,0 chr1 20827692 . C . PASS END=20827870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:34:0,87,1256:0,92,255:40,0 chr1 20827871 . A . PASS END=20827872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:20,0 chr1 20827873 . T . PASS END=20827890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:17:0,48,607:0,51,255:18,0 chr1 20827891 . A . PASS END=20827891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 20827892 . A . PASS END=20827910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:16,0 chr1 20827911 . T . PASS END=20827911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr1 20827912 . C . PASS END=20827912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 20828562 . C . PASS END=20828676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:36:0,87,1302:0,92,255:40,0 chr1 20828677 . C . PASS END=20828682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:33:0,63,945:0,89,255:21,0 chr1 20829715 . C . PASS END=20829765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,105,1452:0,107,255:40,0 chr1 20829766 . T . PASS END=20829802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,102,1530:0,111,255:40,0 chr1 20834017 . C . PASS END=20834019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,152,255:40,0 chr1 20834398 . C . PASS END=20834399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 20834400 . T . PASS END=20834404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 20834405 . T . PASS END=20834410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20834411 . G . PASS END=20834425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 20834426 . T . PASS END=20834429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 20834430 . G . PASS END=20834434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 20834435 . A . PASS END=20834435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20834436 . C . PASS END=20834439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 20834440 . G . PASS END=20834443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 20834444 . A . PASS END=20834444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 20834445 . G . PASS END=20834446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20834447 . G . PASS END=20834474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 20834475 . G . PASS END=20834475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 20834476 . G . PASS END=20834478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 20834479 . G . PASS END=20834486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 20834487 . G . PASS END=20834487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,638:0,24,255:17,0 chr1 20834488 . G . PASS END=20834496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 20834497 . G . PASS END=20834497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 20834498 . G . PASS END=20834517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 20879467 . A . PASS END=20879496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,621:0,44,255:19,0 chr1 20879497 . C . PASS END=20879508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 20879509 . G . PASS END=20879510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 20879511 . G . PASS END=20879517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 20879518 . T . PASS END=20879518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 20879519 . G . PASS END=20879533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:24,0 chr1 20879534 . T . PASS END=20879543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 20879544 . G . PASS END=20879546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 20879547 . C . PASS END=20879549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 20879550 . C . PASS END=20879550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 20879551 . T . PASS END=20879553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20879554 . A . PASS END=20879572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1031:0,71,255:26,0 chr1 20879573 . T . PASS END=20879573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:24,0 chr1 20879574 . C . PASS END=20879589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:29,0 chr1 20879590 . G . PASS END=20879595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 20879596 . C . PASS END=20879604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 20879605 . T . PASS END=20879607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 20879608 . C . PASS END=20879649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:33,0 chr1 20879650 . A . PASS END=20879650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:33,0 chr1 20879651 . A . PASS END=20879654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 20879655 . G . PASS END=20879655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:31,0 chr1 20879656 . G . PASS END=20879672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1263:0,86,255:33,0 chr1 20879673 . C . PASS END=20879675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 20879676 . G . PASS END=20879681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 20879682 . C . PASS END=20879695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:21,0 chr1 20879696 . T . PASS END=20879696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 20879697 . G . PASS END=20879707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 20879708 . T . PASS END=20879713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 20879714 . T . PASS END=20879714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:19,0 chr1 20879715 . G . PASS END=20879754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:19,0 chr1 20879755 . A . PASS END=20879758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 20879759 . T . PASS END=20879759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 20879760 . C . PASS END=20879764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 20879765 . C . PASS END=20879765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 20879766 . T . PASS END=20879766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 20879767 . C . PASS END=20879769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 20879770 . T . PASS END=20879902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,366:0,33,255:13,0 chr1 20879903 . T . PASS END=20879938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 20879939 . T . PASS END=20879939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr1 20879940 . C . PASS END=20879960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 20879961 . C . PASS END=20879980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 20879981 . T . PASS END=20879981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 20879982 . G . PASS END=20879997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:5:0,12,180:0,15,186:6,0 chr1 20879998 . G A, 0.33 DRAGENSnpHardQUAL DP=5;MQ=250.00;MQRankSum=0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:3,0,0:1,1,0:11:24,0,50,36,143,179:24,0,132:3,0:3.2819e-01,1.1381e+01,6.4381e+01,4.7137e+01,1.8919e+02,1.9318e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,1,0:3,1,0,1 chr1 20879999 . C . PASS END=20880028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,131:0,12,131:4,0 chr1 20880029 . G . PASS END=20880035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:2,0 chr1 20880036 . G . PASS END=20880066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,78:3,0 chr1 20880067 . G . LowGQ END=20880119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,31:0,0,61:3,0 chr1 20880120 . C . PASS END=20880144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 20880145 . G . PASS END=20880167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 20880168 . C . PASS END=20880173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,349:0,27,255:9,0 chr1 20880174 . G . PASS END=20880174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 20880175 . C . PASS END=20880182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 20880183 . G . PASS END=20880183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 20880184 . C . PASS END=20880207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 20880208 . C . PASS END=20880220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 20880221 . A . PASS END=20880224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 20880225 . C . PASS END=20880266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 20880267 . CGAG C, 0.14 DRAGENIndelHardQUAL DP=10;MQ=248.35;MQRankSum=1.733;ReadPosRankSum=-1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,2,0:0.200,0.000:10:5,1,0:3,1,0:15:6,0,50,30,233,264:48,0,250:7,4:1.3851e-01,1.5032e+01,6.8032e+01,5.8969e+01,2.8323e+02,2.9544e+02:0.00,21.00,24.00,34.77,55.77,37.77:4,4,1,1:3,5,0,2 chr1 20880268 . G . LowGQ END=20880271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:10:0,0,163:47,0,255:9,4 chr1 20880272 . A . PASS END=20880290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 20880291 . G . PASS END=20880304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:7:0,18,270:0,21,255:6,0 chr1 20880305 . G . PASS END=20880305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 20880306 . A . PASS END=20880307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 20880308 . G . PASS END=20880317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr1 20880318 . G . PASS END=20880322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 20880323 . A . LowGQ END=20880324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:0,0,212:7,1 chr1 20880325 . C . PASS END=20880331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 20880332 . A . PASS END=20880333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 20880334 . G . PASS END=20880341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 20880342 . C . PASS END=20880342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 20880343 . C . LowGQ END=20880344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:0,0,217:7,0 chr1 20880345 . G . PASS END=20880348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 20880349 . C . LowGQ END=20880349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:5,0 chr1 20880350 . G . PASS END=20880350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 20880351 . G . PASS END=20880353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,202:0,7,202:5,0 chr1 20880354 . G . PASS END=20880354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,243:5,0 chr1 20880355 . C . PASS END=20880355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:4,0 chr1 20880356 . T . PASS END=20880357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr1 20880358 . A . LowGQ END=20880358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,204:4,0 chr1 20880359 . G . PASS END=20880361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,202:5,0 chr1 20880362 . C . PASS END=20880362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 20880363 . G . PASS END=20880369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 20880370 . C . LowGQ END=20880371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,110:4,0 chr1 20880372 . G . PASS END=20880372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 20880373 . C . LowGQ END=20880373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,72:24,0,96:4,0 chr1 20880374 . G . PASS END=20880376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,178:5,0 chr1 20880377 . G . PASS END=20880377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 20880378 . C . PASS END=20880378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 20880379 . G . PASS END=20880379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr1 20880380 . C . PASS END=20880382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 20880383 . C . PASS END=20880383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,111:0,1,111:4,0 chr1 20880384 . G . PASS END=20880384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 20880385 . G . PASS END=20880385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,139:0,1,139:4,0 chr1 20880386 . C . PASS END=20880386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 20880387 . G . LowGQ END=20880387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:4,0 chr1 20880388 . C . PASS END=20880436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,164:6,0 chr1 20880437 . G . LowGQ END=20880437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr1 20880438 . G . PASS END=20880438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 20880439 . G . LowGQ END=20880439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr1 20880440 . C . PASS END=20880440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 20880441 . G . LowGQ END=20880441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 20880442 . G . PASS END=20880447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 20880448 . G . LowGQ END=20880448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 20880449 . C . PASS END=20880453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 20880454 . T . LowGQ END=20880454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 20880455 . G . PASS END=20880456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 20915172 . C . PASS END=20915172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 20915531 . A . PASS END=20915531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 20915589 . TC T, 47.16 PASS DP=61;MQ=250.00;MQRankSum=6.592;ReadPosRankSum=1.107;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,25,0:0.410,0.000:61:16,9,0:20,16,0:46:76,0,50,829,1202,2031:255,0,255:33,35:4.7163e+01,1.0510e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:17,19,12,13:19,17,14,11 chr1 20915590 . C . LowGQ END=20915590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,35:71:0:71:0,0,171:255,0,255:33,35 chr1 20915623 . A . PASS END=20915635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,160,255:40,0 chr1 20915636 . G . PASS END=20915729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:36:0,92,1308:0,92,255:40,0 chr1 20915730 . T . PASS END=20915730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:31,0 chr1 20915731 . C . PASS END=20915745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 20915746 . C . PASS END=20915748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 20915749 . C . PASS END=20915750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20915751 . C . PASS END=20915767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,893:0,64,255:25,0 chr1 20915768 . T . PASS END=20915768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,813:0,58,255:21,0 chr1 20915769 . C . PASS END=20915771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 20915772 . C . PASS END=20915775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 20915776 . G . PASS END=20915776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 20917206 . G . PASS END=20917206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 20928284 . C . PASS END=20928284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:101:0,120,1800:0,255,255:40,0 chr1 20931421 . G . PASS END=20931510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1288:0,86,255:39,0 chr1 20931511 . T . PASS END=20931511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:29,0 chr1 20931512 . C . PASS END=20931522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:29,0 chr1 20931523 . C . PASS END=20931523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:26,0 chr1 20931524 . T . PASS END=20931524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:27,0 chr1 20931525 . A . PASS END=20931528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20931529 . C . PASS END=20931529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 20931530 . C . PASS END=20931530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:24,0 chr1 20931531 . A . PASS END=20931532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:25,0 chr1 20940335 . T . PASS END=20940351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1247:0,86,255:38,0 chr1 20940352 . T . PASS END=20940352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 20940353 . T . PASS END=20940391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:36:0,90,1313:0,98,255:40,0 chr1 20940392 . G . PASS END=20940392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:30,0 chr1 20944945 . T . PASS END=20944962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,598:0,45,255:18,0 chr1 20944963 . G . PASS END=20945025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 20945026 . T . PASS END=20945026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 20945027 . C . PASS END=20945039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:22,0 chr1 20945040 . G . PASS END=20945045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 20945046 . G . PASS END=20945046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:17,0 chr1 20945047 . C . PASS END=20945058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 20945059 . T . PASS END=20945059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 20945060 . G . PASS END=20945061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 20960042 . A . PASS END=20960051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 20960052 . G . PASS END=20960071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 20960072 . C . PASS END=20960073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 20960074 . G . PASS END=20960074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 20960075 . C . PASS END=20960076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 20960077 . G . PASS END=20960084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 20960085 . G . PASS END=20960085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 20960086 . A . PASS END=20960087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 20960088 . C . PASS END=20960092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 20960093 . C . PASS END=20960098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 20960099 . C . PASS END=20960099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 20960100 . G . PASS END=20960100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 20960101 . C . LowGQ END=20960101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,222:20,0,242:7,0 chr1 20960102 . T . PASS END=20960108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 20960109 . G . PASS END=20960109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 20960110 . C . PASS END=20960121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 20960122 . G . PASS END=20960123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr1 20960124 . C . PASS END=20960126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 20960127 . A . PASS END=20960127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 20960128 . C . LowGQ END=20960128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:3,0 chr1 20960129 . G . PASS END=20960132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,270:0,13,255:6,0 chr1 20960133 . T . PASS END=20960140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,235:0,24,235:8,0 chr1 20960141 . C . LowGQ END=20960142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:0,0,210:7,0 chr1 20960143 . G . PASS END=20960144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 20960145 . G . PASS END=20960145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 20960146 . C . PASS END=20960159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 20960160 . G . PASS END=20960167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 20960168 . G . PASS END=20960173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 20960174 . C . PASS END=20960174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 20960175 . G . PASS END=20960190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 20960191 . A . PASS END=20960191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 20960192 . G . PASS END=20960197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 20960198 . G . PASS END=20960227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:17,0 chr1 20960228 . C . PASS END=20960229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 20960230 . C . PASS END=20960264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,553:0,41,255:16,0 chr1 20960265 . C . PASS END=20960265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 20960266 . C . PASS END=20960273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 20960274 . C . PASS END=20960274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 20960275 . G . PASS END=20960278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 20960279 . C . PASS END=20960279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 20960280 . G . PASS END=20960281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 20960282 . T . PASS END=20960282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 20960283 . T . PASS END=20960295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,454:0,45,255:15,0 chr1 20960296 . C . PASS END=20960296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 20960297 . G . PASS END=20960297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 20960298 . T . PASS END=20960300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 20960301 . T . PASS END=20960301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr1 20960302 . G . PASS END=20960312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 20960313 . G . PASS END=20960353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:9,0 chr1 20960354 . G . PASS END=20960382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,188:6,0 chr1 20960383 . A . LowGQ END=20960384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,218:0,0,225:6,0 chr1 20960385 . A . PASS END=20960387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 20960388 . C . PASS END=20960388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 20960389 . G . PASS END=20960392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 20960393 . A . LowGQ END=20960393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,180:15,0,195:7,0 chr1 20960394 . G . PASS END=20960394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 20960395 . C . LowGQ END=20960396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:0,0,239:7,0 chr1 20960397 . G . PASS END=20960398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 20960399 . C . PASS END=20960399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 20960400 . G . PASS END=20960402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 20960403 . C . PASS END=20960403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:6,0 chr1 20960404 . G . PASS END=20960408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 20960409 . C . PASS END=20960409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 20960410 . G . PASS END=20960412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 20960413 . C . LowGQ END=20960413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr1 20960414 . T . PASS END=20960416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 20960417 . C . PASS END=20960417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 20960418 . A . PASS END=20960422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 20960423 . A . PASS END=20960423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 20960424 . T . PASS END=20960426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 20960427 . A . LowGQ END=20960427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:6,0 chr1 20960428 . G . PASS END=20960428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 20964335 . G . PASS END=20964346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,870:0,72,255:25,0 chr1 20964347 . C . PASS END=20964347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 20964348 . A . PASS END=20964351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 20964352 . A . PASS END=20964355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 20964356 . A . PASS END=20964357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 20964358 . G . PASS END=20964363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 20964364 . G . PASS END=20964364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 20964365 . C . PASS END=20964365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 20964366 . C . PASS END=20964373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1156:0,90,255:32,0 chr1 20964374 . T . PASS END=20964374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr1 20964375 . T . PASS END=20964386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1119:0,80,255:32,0 chr1 20964387 . G . PASS END=20964387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:29,0 chr1 20964388 . C . PASS END=20964430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:34,0 chr1 20964431 . A . PASS END=20964431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:32,0 chr1 20964432 . T . PASS END=20964467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:34:0,82,1249:0,82,255:38,0 chr1 20964468 . C . PASS END=20964504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1219:0,88,255:35,0 chr1 20964505 . G C, 50.00 PASS DP=36;MQ=249.84;MQRankSum=4.413;ReadPosRankSum=2.701;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,24,0:0.667,0.000:36:5,9,0:7,15,0:43:85,0,41,858,429,1287:255,0,255:12,0:5.0000e+01,2.1072e-04,4.4144e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,3,8,16:2,10,13,11 chr1 20964506 . A . PASS END=20964537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:33,0 chr1 20964538 . T . PASS END=20964542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1100:0,74,255:26,0 chr1 20964543 . G . PASS END=20964550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 20964551 . G . PASS END=20964554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1031:0,84,255:28,0 chr1 20964555 . A . PASS END=20964570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,931:0,62,255:25,0 chr1 20964571 . T . PASS END=20964572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,861:0,56,255:20,0 chr1 20964573 . C . PASS END=20964576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 20964577 . G . PASS END=20964592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:19,0 chr1 20964593 . T . PASS END=20964594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:15,0 chr1 20964595 . G . PASS END=20964622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 20966385 . G . PASS END=20966392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 20966393 . C . PASS END=20966393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 20966394 . T . PASS END=20966437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,809:0,63,255:25,0 chr1 20966438 . A . PASS END=20966438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 20966439 . G . PASS END=20966457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,929:0,62,255:25,0 chr1 20966458 . C . PASS END=20966458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 20966459 . T . PASS END=20966462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 20966463 . G . PASS END=20966464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 20966465 . G . PASS END=20966465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:19,0 chr1 20966466 . T . PASS END=20966475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:20,0 chr1 20966476 . T . PASS END=20966485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 20970983 . A . PASS END=20971011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:19,0 chr1 20971012 . C . PASS END=20971013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:20,0 chr1 20971014 . C . PASS END=20971018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 20971019 . C . PASS END=20971036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 20971037 . T . PASS END=20971037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,679:0,52,255:21,0 chr1 20971038 . C . PASS END=20971040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 20971041 . C . PASS END=20971041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 20971042 . G . PASS END=20971047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 20971048 . T . PASS END=20971048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 20971049 . C . PASS END=20971072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,908:0,69,255:24,0 chr1 20971073 . A . PASS END=20971074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 20971075 . G . PASS END=20971087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,892:0,72,255:24,0 chr1 20971088 . C . PASS END=20971108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:17:0,42,630:0,51,255:19,0 chr1 20971109 . A . PASS END=20971122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:11,0 chr1 20971123 . A . PASS END=20971135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 20971136 . T . PASS END=20971158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,164:6,0 chr1 20971159 . T . PASS END=20971165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:4:0,9,135:0,12,147:3,0 chr1 20972042 . C . PASS END=20972042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 20972053 . C . PASS END=20972057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr1 20972058 . C . PASS END=20972085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,638:0,54,255:19,0 chr1 20972086 . G . PASS END=20972126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,693:0,60,255:26,0 chr1 20972127 . A . PASS END=20972127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 20972128 . G . PASS END=20972146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,961:0,75,255:25,0 chr1 20972147 . C . PASS END=20972147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 20972148 . A . PASS END=20972190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,62,255:25,0 chr1 20972191 . C . PASS END=20972216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,46,255:19,0 chr1 20974998 . A . PASS END=20975006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:28,0 chr1 20975007 . C . PASS END=20975008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 20975009 . T . PASS END=20975034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:33,0 chr1 20975035 . C . PASS END=20975035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr1 20975036 . T . PASS END=20975052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1296:0,105,255:37,0 chr1 20975053 . C . PASS END=20975053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1324:0,59,255:35,0 chr1 20975054 . A . PASS END=20975114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:30:0,86,1044:0,86,255:38,0 chr1 20975115 . T . PASS END=20975118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1147:0,77,255:26,0 chr1 20975119 . C . PASS END=20975120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20975121 . C . PASS END=20975125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,77,255:25,0 chr1 20975130 . G . PASS END=20975130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 20975135 . G . PASS END=20975135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 20975487 . G . PASS END=20975500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,631:0,41,255:19,0 chr1 20975501 . G . PASS END=20975512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 20975513 . G . PASS END=20975513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 20975514 . G . PASS END=20975514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 20975515 . G . PASS END=20975515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 20975516 . C . PASS END=20975524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 20975525 . A . PASS END=20975525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 20975526 . C . PASS END=20975526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 20975527 . T . PASS END=20975527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 20975528 . A . PASS END=20975542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:24,0 chr1 20975543 . C . PASS END=20975543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 20975544 . C . PASS END=20975550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,901:0,75,255:26,0 chr1 20975551 . G . PASS END=20975554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 20975555 . G . PASS END=20975572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 20975573 . T . PASS END=20975578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 20975579 . G . PASS END=20975620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr1 20975621 . A . PASS END=20975621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 20975622 . A . PASS END=20975622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 20975623 . A . PASS END=20975623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 20975624 . G . PASS END=20975627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 20975628 . C . PASS END=20975628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 20975629 . A . PASS END=20975649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,908:0,72,255:24,0 chr1 20975650 . C . PASS END=20975650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 20975651 . C . PASS END=20975654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 20975655 . A . PASS END=20975688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 20975689 . T . PASS END=20975718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 20975719 . A . PASS END=20975725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:8,0 chr1 20976927 . A . PASS END=20976943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 20976944 . A . PASS END=20976944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 20976945 . G . PASS END=20976960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,709:0,63,255:22,0 chr1 20976961 . A . PASS END=20976981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1072:0,80,255:30,0 chr1 20976982 . A . PASS END=20976984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 20976985 . T . PASS END=20976991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 20976992 . C . PASS END=20976992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 20976993 . C . PASS END=20977014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1040:0,84,255:31,0 chr1 20977015 . A . PASS END=20977016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1072:0,76,255:26,0 chr1 20977017 . A . PASS END=20977046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1164:0,85,255:34,0 chr1 20977047 . G . PASS END=20977047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:32,0 chr1 20977048 . C . PASS END=20977102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1211:0,88,255:37,0 chr1 20977103 . G . PASS END=20977103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:33,0 chr1 20977104 . A . PASS END=20977126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,95,255:34,0 chr1 20977127 . G . PASS END=20977131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 20977132 . A . PASS END=20977133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20977134 . A . PASS END=20977134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 20977135 . C . PASS END=20977140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1023:0,84,255:28,0 chr1 20977141 . G . PASS END=20977141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 20977142 . C . PASS END=20977148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20977149 . G . PASS END=20977149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 20977150 . C . PASS END=20977151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20977152 . C . PASS END=20977155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 20977156 . T . PASS END=20977158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 20977159 . T . PASS END=20977179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:26,0 chr1 20977180 . T . PASS END=20977184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 20977202 . G . PASS END=20977202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 20977248 . G . PASS END=20977248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 20977297 . G . PASS END=20977297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 20977305 . G . PASS END=20977305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 20977447 . C . PASS END=20977447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 20977524 . C . PASS END=20977524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 20977536 . G . PASS END=20977536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 20977538 . A . PASS END=20977538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 20977694 . G . PASS END=20977694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:24,0 chr1 20977703 . G . PASS END=20977703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 20977710 . C . PASS END=20977710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 20977716 . G . PASS END=20977716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 20977718 . A . PASS END=20977718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr1 20977726 . G . PASS END=20977726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr1 20977753 . T . PASS END=20977753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr1 20977755 . C . LowGQ END=20977755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,11:37:0:37:0,0,582:255,0,255:34,1 chr1 20977763 . C . PASS END=20977763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 20977770 . T . PASS END=20977770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 20977797 . A . PASS END=20977797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 20977839 . T . PASS END=20977839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:26:0,48,720:0,78,255:16,0 chr1 20977886 . G . PASS END=20977886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 20977991 . T . PASS END=20977991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 20978001 . C . PASS END=20978001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 20978292 . A . PASS END=20978292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:18:59:0,18,270:0,177,255:6,0 chr1 20978294 . TTTTATTTATTTA T,TTTTATTTATTTATTTATTTA, 823.72 PASS DP=59;MQ=242.85;FractionInformativeReads=0.966 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,31,26,0:0.544,0.456,0.000:57:0,20,13,0:0,11,13,0:50:828,776,51,960,0,52,1574,776,960,1574:255,0,125:0,79:4.5000e+02,4.5000e+02,5.2317e+01,4.5000e+02,4.7113e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,2.00,5.00,2.00,4.00,5.00,34.77,36.77,36.77,37.77:0,0,19,38:0,0,29,28 chr1 20978872 . T . PASS END=20978872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr1 20978873 . C . PASS END=20978873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr1 20978874 . A . PASS END=20979021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:33:0,82,1141:0,82,255:40,0 chr1 20979114 . C . PASS END=20979220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:57:0,120,1800:0,154,255:40,0 chr1 20979344 . C . PASS END=20979350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,123,255:40,0 chr1 20979351 . C . PASS END=20979464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:92:41:0,92,1458:0,92,255:40,1 chr1 20980120 . C . PASS END=20980123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 20980124 . A . PASS END=20980124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 20980125 . G . PASS END=20980125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 20980126 . G . PASS END=20980126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 20980127 . T . PASS END=20980129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 20980130 . G . PASS END=20980142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 20980143 . C . PASS END=20980157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 20980158 . T . PASS END=20980158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,599:0,43,255:19,0 chr1 20980159 . C . PASS END=20980171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:23,0 chr1 20980172 . T . PASS END=20980172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 20980173 . G . PASS END=20980183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:25,0 chr1 20980184 . G . PASS END=20980184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 20980185 . G . PASS END=20980193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 20980194 . G . PASS END=20980194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 20980195 . G . PASS END=20980211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:25,0 chr1 20980212 . T . PASS END=20980212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,829:0,23,255:21,0 chr1 20980213 . G . PASS END=20980220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:23,0 chr1 20980221 . A . PASS END=20980222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 20980223 . C . PASS END=20980226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 20980227 . A . PASS END=20980227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 20980228 . G . PASS END=20980229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 20980230 . G . PASS END=20980230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 20980231 . G A, 34.99 PASS DP=23;MQ=248.92;MQRankSum=3.291;ReadPosRankSum=1.959;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,5,0:0.227,0.000:22:10,3,0:7,2,0:35:70,0,50,178,600,778:119,0,255:15,0:3.4986e+01,1.3999e-03,5.3001e+01,1.7831e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,2,3:8,9,2,3 chr1 20980232 . G . PASS END=20980243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:19:0,42,630:0,44,255:19,0 chr1 20980244 . T . PASS END=20980256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr1 20980257 . T . PASS END=20980257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 20980258 . C . PASS END=20980267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 20980716 . C . PASS END=20980728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 20980729 . G . PASS END=20980729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 20980730 . C . PASS END=20980733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 20980734 . G . PASS END=20980842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1024:0,81,255:40,0 chr1 20980843 . T . PASS END=20980853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1140:0,83,255:32,0 chr1 20980854 . G . PASS END=20980854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 20980855 . C . PASS END=20980855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 20980856 . A . PASS END=20980864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,87,255:26,0 chr1 20981107 . C . PASS END=20981200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:41:0,96,1615:0,96,255:40,0 chr1 20981933 . C . PASS END=20982027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,102,1530:0,124,255:40,0 chr1 20982169 . C . PASS END=20982267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:35:0,87,1305:0,98,255:40,0 chr1 20982268 . G . PASS END=20982272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:24,0 chr1 20982594 . C . PASS END=20982595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr1 20982596 . A . PASS END=20982597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:32:0,68,1086:0,68,255:32,0 chr1 20982598 . G . PASS END=20982605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1241:0,99,255:34,0 chr1 20982606 . T . PASS END=20982606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 20982607 . G . PASS END=20982607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:32,0 chr1 20982608 . G . PASS END=20982614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:36,0 chr1 20982615 . C . PASS END=20982615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:35,0 chr1 20982616 . C . PASS END=20982620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:36,0 chr1 20982621 . C . PASS END=20982622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 20982623 . C . PASS END=20982623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:33,0 chr1 20982624 . T . PASS END=20982630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:35,0 chr1 20982631 . G A, 157.89 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,17,0:0,20,0:108:196,111,0,296,296,296:255,114,0:0,0:1.5789e+02,1.0789e+02,0.0000e+00,2.9266e+02,3.2743e+02,2.9567e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,27:0,0,22,15 chr1 20982632 . C . PASS END=20982668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1071:0,88,255:37,0 chr1 20982669 . T . PASS END=20982680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr1 20987368 . C . PASS END=20987368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 20987374 . C . PASS END=20987401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1006:0,82,255:35,0 chr1 20987402 . A . PASS END=20987402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1005:0,44,255:33,0 chr1 20987403 . T . PASS END=20987484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1208:0,95,255:40,0 chr1 20987690 . C . PASS END=20987694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 20987695 . A . PASS END=20987695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 20987696 . G . PASS END=20987716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,860:0,61,255:26,0 chr1 20987717 . G . PASS END=20987717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 20987718 . A . PASS END=20987722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 20987723 . C . PASS END=20987740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1100:0,87,255:32,0 chr1 20987741 . C . PASS END=20987777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:33,0 chr1 20987778 . C T, 45.20 PASS DP=34;MQ=249.77;MQRankSum=4.739;ReadPosRankSum=0.991;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,12,0:0.353,0.000:34:12,7,0:10,5,0:44:80,0,47,180,180,180:255,0,255:21,0:4.5195e+01,1.7473e-04,5.0000e+01,1.7997e+02,2.1474e+02,1.8298e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,15,8,4:9,13,7,5 chr1 20987779 . G . PASS END=20987815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1211:0,88,255:34,0 chr1 20987816 . A . PASS END=20987825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:29,0 chr1 20987826 . C . PASS END=20987829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 20987830 . G . PASS END=20987830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20987831 . T . PASS END=20987831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 20987832 . G . PASS END=20987832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20987833 . C . PASS END=20987833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 20987834 . T . PASS END=20987835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20987836 . G . PASS END=20987836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20987837 . G . PASS END=20987845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr1 20987846 . T . PASS END=20987849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1031:0,84,255:28,0 chr1 20987850 . C . PASS END=20987850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 20987851 . C . PASS END=20987861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,997:0,84,255:29,0 chr1 20987862 . G . PASS END=20987872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1055:0,74,255:25,0 chr1 20987873 . G C, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,18,0:0,11,0:84:172,87,0,1125,87,1125:255,87,0:0,0:1.3428e+02,8.4282e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,18:0,0,14,15 chr1 20987874 . T . PASS END=20987875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20987876 . C . PASS END=20987894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,70,255:26,0 chr1 20987955 . G . PASS END=20987955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 20988799 . T . PASS END=20988881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,167,255:40,0 chr1 20990656 . T . PASS END=20990662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 20990663 . G . PASS END=20990724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,764:0,60,255:26,0 chr1 20990725 . A . PASS END=20990726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20990727 . C . PASS END=20990731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:26,0 chr1 20990732 . C . PASS END=20990732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20990733 . T . PASS END=20990733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 20990734 . G . PASS END=20990763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:29,0 chr1 20990764 . T . PASS END=20990769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 20990770 . A . PASS END=20990770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:24,0 chr1 20990771 . A . PASS END=20990772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:26,0 chr1 20990773 . G . PASS END=20990774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 20990775 . C . PASS END=20990790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,70,255:27,0 chr1 20990791 . T . PASS END=20990802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,765:0,54,255:18,0 chr1 20991077 . T . PASS END=20991077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr1 20991078 . C . PASS END=20991079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 20991080 . C . PASS END=20991080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 20991081 . A . PASS END=20991081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,930:0,37,255:26,0 chr1 20991082 . G . PASS END=20991083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 20991084 . G . PASS END=20991084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 20991085 . G . PASS END=20991088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,900:0,45,255:27,0 chr1 20991089 . A . PASS END=20991089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 20991090 . C . PASS END=20991105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,945:0,62,255:26,0 chr1 20991106 . T . PASS END=20991106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr1 20991107 . G . PASS END=20991115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,911:0,62,255:26,0 chr1 20991116 . A . PASS END=20991116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 20991117 . C . PASS END=20991117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 20991118 . G . PASS END=20991118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr1 20991119 . C . PASS END=20991119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:23:28:0,23,878:0,23,255:25,0 chr1 20991120 . T . PASS END=20991120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 20991121 . T . PASS END=20991121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,939:0,10,255:26,0 chr1 20991122 . G . PASS END=20991122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 20991123 . G . PASS END=20991123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 20991124 . C . PASS END=20991124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 20991125 . C . PASS END=20991125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,947:0,32,255:26,0 chr1 20991126 . T . PASS END=20991126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 20991127 . T . PASS END=20991127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 20991128 . G . PASS END=20991128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 20991129 . G . PASS END=20991130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 20991131 . G . PASS END=20991131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 20991132 . A . PASS END=20991132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 20991133 . A . PASS END=20991133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 20991134 . A . PASS END=20991134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:25,0 chr1 20991135 . G . PASS END=20991135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:27,0 chr1 20991136 . G . PASS END=20991136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 20991137 . G . PASS END=20991137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,1030:0,32,255:25,0 chr1 20991138 . A . PASS END=20991138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1035:0,54,255:27,0 chr1 20991139 . T . PASS END=20991139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 20991140 . G . PASS END=20991140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:30,0 chr1 20991141 . T . PASS END=20991141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:9:36:0,9,1004:0,9,255:26,0 chr1 20991142 . C . PASS END=20991142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:19:36:0,19,1047:0,19,255:28,0 chr1 20991143 . G . PASS END=20991143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1176:0,91,255:31,0 chr1 20991144 . A . LowGQ END=20991144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,8:36:0:36:0,0,850:105,0,255:24,0 chr1 20991145 . G . PASS END=20991145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 20991146 . G . PASS END=20991146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1196:0,31,255:30,0 chr1 20991147 . G . LowGQ END=20991148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:0:35:0,0,749:17,0,255:27,0 chr1 20991149 . C . PASS END=20991149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:31,0 chr1 20991150 . T . LowGQ END=20991150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,778:42,0,255:26,0 chr1 20991151 . C . PASS END=20991152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:13:34:0,13,955:0,13,255:27,0 chr1 20991153 . A . LowGQ END=20991153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,9:34:0:34:0,0,762:97,0,255:21,0 chr1 20991154 . G . PASS END=20991154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 20991155 . G . LowGQ END=20991156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,842:3,0,255:25,0 chr1 20991157 . G . PASS END=20991157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1127:0,63,255:30,0 chr1 20991158 . G . LowGQ END=20991158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,906:3,0,255:26,0 chr1 20991159 . A . PASS END=20991159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1107:0,33,255:29,0 chr1 20991160 . A . LowGQ END=20991160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,10:35:0:35:0,0,715:105,0,255:19,0 chr1 20991161 . G . PASS END=20991161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:28,0 chr1 20991162 . G . PASS END=20991162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1178:0,63,255:29,0 chr1 20991163 . G . PASS END=20991163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,930:0,19,255:25,0 chr1 20991164 . C . PASS END=20991164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1070:0,30,255:27,0 chr1 20991165 . C . LowGQ END=20991165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,10:34:0:34:0,0,573:173,0,255:20,0 chr1 20991166 . G . PASS END=20991166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr1 20991167 . G . PASS END=20991168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:24:34:0,24,1080:0,24,255:28,0 chr1 20991169 . G . PASS END=20991169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:29,0 chr1 20991170 . C . LowGQ END=20991171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,11:35:0:32:0,0,520:136,0,255:22,0 chr1 20991172 . G . PASS END=20991172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 20991173 . G . PASS END=20991173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:19:32:0,19,1009:0,19,255:29,0 chr1 20991174 . G . PASS END=20991174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1025:0,41,255:29,0 chr1 20991175 . G . PASS END=20991175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:29:32:0,29,870:0,29,255:27,1 chr1 20991176 . C . LowGQ END=20991178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,10:32:0:32:0,0,320:0,0,255:27,1 chr1 20991179 . T . PASS END=20991179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1075:0,63,255:29,0 chr1 20991180 . T . LowGQ END=20991182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,8:34:0:34:0,0,500:37,0,255:24,1 chr1 20991183 . G . PASS END=20991183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 20991184 . G . PASS END=20991184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:28,0 chr1 20991185 . G . PASS END=20991185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 20991186 . G . LowGQ END=20991186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,833:26,0,255:25,0 chr1 20991187 . C . PASS END=20991187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1136:0,66,255:30,0 chr1 20991188 . C . LowGQ END=20991189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,12:34:0:33:0,0,432:142,0,255:19,0 chr1 20991190 . G . PASS END=20991190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr1 20991191 . G . PASS END=20991191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 20991192 . G . PASS END=20991192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1046:0,71,255:31,0 chr1 20991193 . T . LowGQ END=20991193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,13:34:0:34:0,0,377:247,0,255:19,0 chr1 20991194 . G . PASS END=20991196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,980:0,85,255:33,0 chr1 20991197 . T . LowGQ END=20991197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,12:34:0:34:0,0,550:119,0,255:20,0 chr1 20991198 . G . PASS END=20991198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1143:0,85,255:31,0 chr1 20991199 . G . PASS END=20991199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1050:0,71,255:32,0 chr1 20991200 . G . LowGQ END=20991200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,13:36:0:36:0,0,521:122,0,255:23,2 chr1 20991201 . A . PASS END=20991231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1250:0,91,255:36,0 chr1 20991232 . G . PASS END=20991232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:29,0 chr1 20991233 . G . PASS END=20991237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:29,0 chr1 20991238 . G . PASS END=20991239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 20991240 . G . PASS END=20991243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 20991244 . A . PASS END=20991244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 20991245 . G . PASS END=20991250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 20991251 . A . PASS END=20991251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 20991252 . T . PASS END=20991255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 20992707 . T . PASS END=20992781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:33:0,86,1219:0,86,255:40,0 chr1 20992782 . C . PASS END=20992802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1350:0,105,255:37,0 chr1 20992803 . T . PASS END=20992818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:25,0 chr1 20992819 . G C, 121.72 PASS DP=26;MQ=250.00;FractionInformativeReads=0.962 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,10,0:0,15,0:72:159,75,0,934,77,941:255,61,0:1,0:1.2172e+02,7.1716e+01,2.5886e-07,4.5000e+02,1.0909e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,16:0,0,16,9 chr1 20992820 . T . PASS END=20992824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:24,0 chr1 20996914 . C . PASS END=20996984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,132,255:40,0 chr1 20998431 . C . PASS END=20998485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,507:0,42,255:18,0 chr1 20998486 . A . PASS END=20998497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 20998498 . G . PASS END=20998498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 20998499 . C . PASS END=20998521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,756:0,66,255:23,0 chr1 20998522 . C . PASS END=20998522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 20998523 . A . PASS END=20998564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 20998565 . T . PASS END=20998589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,652:0,54,255:19,0 chr1 20998590 . T . PASS END=20998590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 20998591 . G . PASS END=20998622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr1 20998623 . A . PASS END=20998623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 20998624 . G . PASS END=20998630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 20998631 . A . PASS END=20998631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 20998632 . T . PASS END=20998657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 20998658 . A . PASS END=20998677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 20998678 . T . PASS END=20998678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr1 20998679 . G . PASS END=20998689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:12,0 chr1 21009146 . C . PASS END=21009149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 21009150 . C . PASS END=21009150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 21009151 . T . PASS END=21009152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 21009153 . T . PASS END=21009178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,878:0,69,255:26,0 chr1 21009179 . G . PASS END=21009179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 21009180 . G . PASS END=21009211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,74,255:26,0 chr1 21009212 . G . PASS END=21009219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21009220 . G . PASS END=21009221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 21009222 . A . PASS END=21009225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21009226 . A . PASS END=21009230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 21009231 . C . PASS END=21009256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:30,0 chr1 21009257 . G . PASS END=21009311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,870:0,64,255:26,0 chr1 21009312 . T . PASS END=21009312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 21009313 . T . PASS END=21009339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,65,255:26,0 chr1 21009340 . G . PASS END=21009340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 21009341 . C . PASS END=21009343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 21009344 . T . PASS END=21009344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 21009345 . C . PASS END=21009346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 21009347 . A . PASS END=21009352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:20,0 chr1 21009353 . A . PASS END=21009353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:18,0 chr1 21009354 . A . PASS END=21009358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 21009359 . C . PASS END=21009359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21009360 . T . PASS END=21009377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:18,0 chr1 21011302 . C . PASS END=21011309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 21011310 . C . PASS END=21011319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 21011320 . T . PASS END=21011325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 21011326 . A . PASS END=21011330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21011331 . G . PASS END=21011331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 21011332 . G . PASS END=21011341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 21011342 . C . PASS END=21011342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 21011343 . A . PASS END=21011345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 21011346 . A G, 49.91 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=0.585;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:6,6,0:6,5,0:48:85,0,50,391,421,812:255,0,255:11,0:4.9907e+01,6.6010e-05,5.3000e+01,3.9095e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,3,6,5:7,5,5,6 chr1 21011347 . G . PASS END=21011347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 21011348 . T . PASS END=21011364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:25,0 chr1 21011365 . A . PASS END=21011365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:23,0 chr1 21011366 . T . PASS END=21011374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,872:0,65,255:26,0 chr1 21011375 . T . PASS END=21011375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,827:0,31,255:24,0 chr1 21011376 . C . PASS END=21011376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 21011377 . T . PASS END=21011377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21011378 . C . PASS END=21011383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 21011384 . T . PASS END=21011403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:25,0 chr1 21011404 . A . PASS END=21011404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:23,0 chr1 21011405 . G . PASS END=21011501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,814:0,61,255:26,0 chr1 21011502 . C . PASS END=21011513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:18,0 chr1 21012539 . A . PASS END=21012543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,768:0,63,255:23,0 chr1 21012544 . T . PASS END=21012544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 21012545 . G . PASS END=21012569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,893:0,62,255:26,0 chr1 21012570 . G . PASS END=21012574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 21012575 . G A, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.318;ReadPosRankSum=3.775;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,16,0:0.593,0.000:27:3,9,0:8,7,0:47:85,0,48,572,336,908:255,0,255:11,0:5.0000e+01,8.1283e-05,5.0587e+01,4.5000e+02,3.7057e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,9,7:5,6,8,8 chr1 21012576 . G . PASS END=21012589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,925:0,65,255:26,0 chr1 21012590 . G . PASS END=21012590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 21012591 . G . PASS END=21012612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:26,0 chr1 21012613 . C . PASS END=21012619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:24,0 chr1 21013881 . C . PASS END=21013882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 21013883 . G . PASS END=21013883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 21013884 . C . PASS END=21013894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 21013895 . T . PASS END=21013895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,884:0,47,255:25,0 chr1 21013896 . G . PASS END=21013902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:30,0 chr1 21013903 . T . PASS END=21013903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 21013904 . C . PASS END=21014001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1094:0,80,255:38,0 chr1 21014002 . A . PASS END=21014052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,907:0,64,255:26,0 chr1 21014053 . A . PASS END=21014055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:21,0 chr1 21014056 . T . PASS END=21014056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:22,0 chr1 21014057 . G . PASS END=21014057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 21014058 . C . PASS END=21014060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 21014061 . A . PASS END=21014061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:21,0 chr1 21014062 . G . PASS END=21014062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr1 21014063 . C . PASS END=21014063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 21014064 . G . PASS END=21014065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 21014066 . C . PASS END=21014067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 21014068 . T . PASS END=21014068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:19,0 chr1 21014069 . C . PASS END=21014070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 21014071 . T . PASS END=21014072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:17,0 chr1 21014073 . C . PASS END=21014075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 21014076 . G . PASS END=21014076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,720:0,11,255:17,0 chr1 21014077 . A . PASS END=21014079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 21014080 . C . PASS END=21014080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 21014081 . A . PASS END=21014081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr1 21014082 . C . PASS END=21014082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 21014083 . T . PASS END=21014083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 21014084 . C . PASS END=21014084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 21014085 . A . PASS END=21014085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:17,0 chr1 21014086 . T . PASS END=21014090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:18,0 chr1 21014091 . G . PASS END=21014092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:16,0 chr1 21014093 . A . PASS END=21014093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:15,0 chr1 21014094 . G . PASS END=21014094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:16,0 chr1 21014095 . T . PASS END=21014095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,560:0,13,255:15,0 chr1 21014096 . A . PASS END=21014096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:16,0 chr1 21014097 . T . PASS END=21014132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,657:0,41,255:19,0 chr1 21014133 . C . PASS END=21014136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21014137 . T . PASS END=21014137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 21014138 . T . PASS END=21014143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 21014144 . G . PASS END=21014146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 21014147 . C . PASS END=21014155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 21014156 . C . PASS END=21014156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 21014157 . A . PASS END=21014158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21014159 . G . PASS END=21014159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 21014160 . G . PASS END=21014162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 21014163 . A . PASS END=21014163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 21014164 . G . PASS END=21014172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 21014173 . A . PASS END=21014173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 21014174 . C . PASS END=21014174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21014175 . A . PASS END=21014175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 21014176 . G . PASS END=21014179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21014180 . T . PASS END=21014180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 21014181 . T . PASS END=21014199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:23,0 chr1 21014200 . T . PASS END=21014200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 21014201 . C . PASS END=21014208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,756:0,69,255:24,0 chr1 21014209 . C . PASS END=21014209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 21014210 . C . PASS END=21014224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 21014225 . A . PASS END=21014225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 21014226 . T . PASS END=21014233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:25,0 chr1 21014234 . G . PASS END=21014293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,963:0,82,255:33,0 chr1 21014294 . T . PASS END=21014294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 21014295 . G . PASS END=21014319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,903:0,81,255:28,0 chr1 21014320 . A . PASS END=21014320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,884:0,18,255:27,0 chr1 21014321 . C . PASS END=21014325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr1 21014326 . G . PASS END=21014327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 21014328 . T . PASS END=21014342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 21014343 . A . PASS END=21014343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr1 21014344 . T . PASS END=21014387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1119:0,80,255:35,0 chr1 21014388 . C . PASS END=21014388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 21014389 . C . PASS END=21014401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:28,0 chr1 21014402 . C . PASS END=21014402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 21014403 . A . PASS END=21014403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 21014404 . G . PASS END=21014404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21014405 . C . PASS END=21014420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,869:0,69,255:25,0 chr1 21014421 . C . PASS END=21014427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 21014428 . A . PASS END=21014428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:15,0 chr1 21014429 . G . PASS END=21014437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 21016681 . C . PASS END=21016690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr1 21016691 . C . PASS END=21016701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1003:0,81,255:30,0 chr1 21016702 . C . PASS END=21016702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 21016703 . C . PASS END=21016703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 21016704 . T . PASS END=21016704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 21016705 . C . PASS END=21016711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1096:0,90,255:31,0 chr1 21016712 . G . PASS END=21016712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 21016713 . G . PASS END=21016713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 21016714 . A . PASS END=21016714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 21016715 . C . PASS END=21016715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 21016716 . A . PASS END=21016716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 21016717 . G . PASS END=21016722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 21016723 . C . PASS END=21016723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr1 21016724 . G . PASS END=21016726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 21016727 . A . PASS END=21016728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:29,0 chr1 21016729 . A . PASS END=21016736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1140:0,93,255:31,0 chr1 21016737 . C . PASS END=21016737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 21016738 . G . PASS END=21016740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 21016741 . T . PASS END=21016741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 21016742 . G . PASS END=21016743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 21016744 . C . PASS END=21016745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 21016746 . G . PASS END=21016748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 21016749 . A . PASS END=21016752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 21016753 . C . PASS END=21016753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 21016754 . T . PASS END=21016757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 21016758 . T . PASS END=21016760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:26,0 chr1 21016761 . A . PASS END=21016761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,967:0,26,255:23,0 chr1 21016762 . G . PASS END=21016762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:25,0 chr1 21016763 . C . PASS END=21016763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:24,0 chr1 21016764 . C . PASS END=21016765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,955:0,35,255:25,0 chr1 21016766 . G . PASS END=21016768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1031:0,71,255:26,0 chr1 21016769 . C . PASS END=21016770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:42:27:0,42,917:0,42,255:25,0 chr1 21016771 . G . PASS END=21016771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:24,0 chr1 21016772 . A . PASS END=21016776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,875:0,42,255:24,0 chr1 21016777 . C . PASS END=21016777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 21016778 . C . PASS END=21016779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:42:27:0,42,847:0,42,255:22,0 chr1 21016780 . G . PASS END=21016780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:22,0 chr1 21016781 . C . PASS END=21016781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:22,0 chr1 21016782 . T . PASS END=21016782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:22,0 chr1 21016783 . C . PASS END=21016783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,807:0,23,255:17,0 chr1 21016784 . G . PASS END=21016784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 21016785 . G . PASS END=21016785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:18,0 chr1 21016786 . C . PASS END=21016786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,790:0,25,255:17,0 chr1 21016787 . C . PASS END=21016787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:17,0 chr1 21016788 . T . PASS END=21016788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 21016789 . T . PASS END=21016789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,719:0,36,255:17,0 chr1 21016790 . A . PASS END=21016790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,692:0,14,255:17,0 chr1 21016791 . T . PASS END=21016791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 21016792 . A . LowGQ END=21016792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,629:3,0,255:16,0 chr1 21016793 . G . PASS END=21016793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 21016794 . T . LowGQ END=21016795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,543:0,0,255:15,0 chr1 21016796 . G . PASS END=21016797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:16,0 chr1 21016798 . C . PASS END=21016798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:15,0 chr1 21016799 . T . PASS END=21016802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:17,0 chr1 21016803 . A . PASS END=21016803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:14,0 chr1 21016804 . G . PASS END=21016804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 21016805 . C . PASS END=21016805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,666:0,21,255:14,0 chr1 21016806 . C . PASS END=21016806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr1 21016807 . G . PASS END=21016809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 21016810 . C . PASS END=21016810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:13,0 chr1 21016811 . C . PASS END=21016811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 21016812 . A . PASS END=21016812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:12,0 chr1 21016813 . G . PASS END=21016817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,540:0,31,255:14,0 chr1 21016818 . T . PASS END=21016818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 21016819 . C . LowGQ END=21016819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,416:2,0,255:7,0 chr1 21016820 . T . PASS END=21016821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,435:0,15,255:8,0 chr1 21016822 . C . PASS END=21016823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr1 21016824 . T . PASS END=21016824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:8,0 chr1 21016825 . A . LowGQ END=21016825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,437:5,0,255:9,0 chr1 21016826 . C . PASS END=21016826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 21016827 . T . LowGQ END=21016827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,408:15,0,255:6,0 chr1 21016828 . C . PASS END=21016828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:10,0 chr1 21024872 . C . PASS END=21024900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,789:0,69,255:26,0 chr1 21024901 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=3.972;ReadPosRankSum=3.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,18,0:0.692,0.000:26:4,7,0:4,11,0:44:85,0,42,607,286,893:255,0,232:8,0:5.0000e+01,1.9130e-04,4.4682e+01,4.5000e+02,3.2088e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,7,11:5,3,10,8 chr1 21024902 . G . PASS END=21024904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 21024905 . A . PASS END=21024910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 21024911 . G . PASS END=21024911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 21024912 . A . PASS END=21024932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:29,0 chr1 21024933 . T . PASS END=21024938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 21024939 . T . PASS END=21024949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 21024950 . A . PASS END=21024959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:24:0,45,675:0,72,255:18,0 chr1 21024960 . G . PASS END=21024961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:15,0 chr1 21024962 . C . PASS END=21024963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:12,0 chr1 21024964 . C . PASS END=21024981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,465:0,36,255:12,0 chr1 21030940 . C . PASS END=21030949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr1 21030950 . G . PASS END=21031036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1070:0,84,255:35,0 chr1 21031037 . A . PASS END=21031037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 21031038 . T . PASS END=21031075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1111:0,80,255:32,0 chr1 21031076 . G . PASS END=21031076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 21031077 . G . PASS END=21031087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,95,255:29,0 chr1 21031088 . C . PASS END=21031088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 21031089 . G . PASS END=21031098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,86,255:28,0 chr1 21031099 . T . PASS END=21031101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 21031102 . C . PASS END=21031167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1209:0,83,255:33,0 chr1 21031168 . A . PASS END=21031168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:31,0 chr1 21031169 . G . PASS END=21031189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1308:0,92,255:35,0 chr1 21031190 . C . PASS END=21031190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:33,0 chr1 21031191 . T . PASS END=21031344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1280:0,87,255:40,0 chr1 21031345 . C . PASS END=21031345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:28,0 chr1 21031346 . C . PASS END=21031354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 21031355 . C . PASS END=21031361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 21031362 . C . PASS END=21031362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21031363 . C . PASS END=21031388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 21031389 . T . PASS END=21031392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:15,0 chr1 21036132 . C . PASS END=21036310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:33:0,81,1215:0,95,255:40,0 chr1 21036311 . T . PASS END=21036321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 21039947 . C . PASS END=21039947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 21039948 . T . PASS END=21039948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 21039949 . C . PASS END=21039958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr1 21039959 . C . PASS END=21039959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:26,0 chr1 21039960 . T . PASS END=21039960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 21039961 . T . PASS END=21039961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 21039962 . G . PASS END=21039974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:29,0 chr1 21039975 . A . PASS END=21039983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 21039984 . C . PASS END=21039984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr1 21039985 . G . PASS END=21039989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 21039990 . T . PASS END=21039991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21039992 . T . PASS END=21039994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 21039995 . A . PASS END=21040014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 21040015 . A . PASS END=21040036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 21040037 . G . PASS END=21040041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 21040042 . C . PASS END=21040048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:17,0 chr1 21041986 . C . PASS END=21041992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 21041993 . C . PASS END=21042119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:28:0,80,1019:0,80,255:40,0 chr1 21042120 . C . PASS END=21042121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:28,0 chr1 21042122 . T . PASS END=21042132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,87,255:26,0 chr1 21043969 . C . PASS END=21043982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr1 21043983 . A . PASS END=21043983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 21043984 . G . PASS END=21043985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 21043986 . C . PASS END=21043986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 21043987 . G . PASS END=21044003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 21044004 . G . PASS END=21044004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 21044005 . C . PASS END=21044005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 21044006 . T . PASS END=21044006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 21044007 . C . PASS END=21044011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 21044012 . A . PASS END=21044012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,319:0,19,255:10,0 chr1 21044013 . C . PASS END=21044017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:13,0 chr1 21044018 . T . PASS END=21044018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 21044019 . C . PASS END=21044033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 21044034 . C . PASS END=21044038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 21044039 . A . PASS END=21044039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:12,0 chr1 21044040 . A . PASS END=21044042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 21044043 . T . PASS END=21044043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 21044044 . G . PASS END=21044047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 21044048 . T . PASS END=21044048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 21044049 . G . PASS END=21044062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 21044063 . T . PASS END=21044066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 21044067 . C . PASS END=21044073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 21044074 . C . PASS END=21044075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 21044076 . G . PASS END=21044087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 21044088 . A . PASS END=21044098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 21044099 . C . PASS END=21044102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 21044103 . C . PASS END=21044123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:12:0,32,443:0,32,255:13,0 chr1 21044124 . G . PASS END=21044133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 21044134 . C . PASS END=21044134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:9,0 chr1 21044135 . A . PASS END=21044139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 21044140 . T . PASS END=21044140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 21044141 . C . PASS END=21044142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 21044143 . C . PASS END=21044160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,349:0,27,255:9,0 chr1 21044161 . A G, 15.85 PASS DP=9;MQ=250.00;MQRankSum=1.666;ReadPosRankSum=1.666;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,2,0:0.222,0.000:9:5,1,0:2,1,0:16:51,0,50,72,250,322:50,0,244:7,0:1.5847e+01,1.1453e-01,5.3115e+01,7.1685e+01,2.8516e+02,3.2496e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,6,1,1:3,4,0,2 chr1 21044162 . C . PASS END=21044162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 21044163 . G . PASS END=21044176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 21044177 . A . PASS END=21044191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:7:0,11,180:0,11,249:6,0 chr1 21044192 . G . PASS END=21044192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,233:3,0 chr1 21044193 . A . PASS END=21044199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:4,0 chr1 21048285 . T . PASS END=21048306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 21048307 . G . PASS END=21048368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 21048369 . G . PASS END=21048383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 21048384 . G . PASS END=21048415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:16,0 chr1 21048416 . A . PASS END=21048416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 21048417 . G . PASS END=21048426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr1 21048427 . C . PASS END=21048427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 21048428 . G . PASS END=21048435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 21048436 . A . PASS END=21048445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 21048446 . T . PASS END=21048446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:10,0 chr1 21048447 . C . PASS END=21048450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 21048451 . A . PASS END=21048451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 21048452 . C . PASS END=21048455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 21048456 . A . PASS END=21048483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 21048484 . A . PASS END=21048488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 21049249 . C . PASS END=21049258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 21049259 . T . PASS END=21049274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 21049275 . T . PASS END=21049275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 21049276 . C . PASS END=21049297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 21049298 . A . PASS END=21049299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 21049300 . G . PASS END=21049300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 21049301 . C . PASS END=21049402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1063:0,84,255:37,0 chr1 21049403 . C . PASS END=21049404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 21049405 . G . PASS END=21049408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:27,0 chr1 21050119 . C . PASS END=21050227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,91,255:40,0 chr1 21050576 . A . PASS END=21050584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 21050585 . G . PASS END=21050585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 21050586 . A . PASS END=21050588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 21050589 . C . PASS END=21050589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 21050590 . G . PASS END=21050592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 21050593 . A . PASS END=21050593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 21050594 . G . PASS END=21050618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:19,0 chr1 21050619 . G . PASS END=21050632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:23,0 chr1 21050633 . C . PASS END=21050633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 21050634 . C . PASS END=21050638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 21050639 . G . PASS END=21050639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 21050640 . G . PASS END=21050655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 21050656 . A . PASS END=21050656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 21050657 . T . PASS END=21050694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr1 21050695 . T . PASS END=21050695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 21050696 . T . PASS END=21050715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 21050716 . G . PASS END=21050726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,775:0,50,255:19,0 chr1 21050727 . C . PASS END=21050727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:18,0 chr1 21050728 . G . PASS END=21050744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,639:0,41,255:19,0 chr1 21050889 . C . PASS END=21050912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,612:0,45,255:17,0 chr1 21050913 . T . PASS END=21050913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 21050914 . G . PASS END=21050920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 21050921 . G . PASS END=21050930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr1 21050931 . G . PASS END=21050948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:23,0 chr1 21050949 . C . PASS END=21050949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 21050950 . T . PASS END=21050957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,803:0,72,255:24,0 chr1 21050958 . C T, 115.75 PASS DP=24;MQ=248.82;FractionInformativeReads=0.958 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,7,0:0,16,0:66:154,69,0,254,254,254:255,72,0:0,0:1.1575e+02,6.5752e+01,1.0354e-06,2.5052e+02,2.8529e+02,2.5353e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,10:0,0,15,8 chr1 21050959 . T . PASS END=21050961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 21050962 . T . PASS END=21050962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 21050963 . C . PASS END=21050963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr1 21050964 . A . PASS END=21050964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:23,0 chr1 21050965 . C . PASS END=21050965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 21050966 . G . PASS END=21050966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 21050967 . G . PASS END=21050970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 21050971 . A . PASS END=21050971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 21050972 . A . PASS END=21050995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,878:0,69,255:25,0 chr1 21050996 . A . PASS END=21050998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 21050999 . T . PASS END=21050999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 21051000 . G . PASS END=21051009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 21051010 . T . PASS END=21051040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 21051041 . A . PASS END=21051057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 21051058 . C . PASS END=21051058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 21051059 . G . PASS END=21051069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 21051070 . T . PASS END=21051086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 21051087 . C . PASS END=21051110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr1 21051111 . C . PASS END=21051128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,108:0,9,108:3,0 chr1 21052413 . C . PASS END=21052414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 21052415 . C . PASS END=21052416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 21052417 . C . PASS END=21052417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 21052418 . C . PASS END=21052421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21052422 . C . PASS END=21052435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,962:0,67,255:26,0 chr1 21052436 . A . PASS END=21052436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,691:0,17,255:21,0 chr1 21052437 . G . PASS END=21052443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1039:0,71,255:26,0 chr1 21052444 . C . PASS END=21052452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1108:0,84,255:29,0 chr1 21052453 . T . PASS END=21052453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 21052454 . T . PASS END=21052463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1057:0,87,255:30,0 chr1 21052464 . G . PASS END=21052464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 21052465 . C . PASS END=21052465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 21052466 . T . PASS END=21052466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 21052467 . C . PASS END=21052469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 21052470 . T . PASS END=21052470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 21052471 . G . PASS END=21052492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1197:0,83,255:34,0 chr1 21052493 . A . PASS END=21052493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1053:0,71,255:33,0 chr1 21052494 . C . PASS END=21052501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1235:0,89,255:35,0 chr1 21052502 . C . PASS END=21052503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 21052504 . G . PASS END=21052514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:33,0 chr1 21052515 . G . PASS END=21052539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr1 21052540 . G . PASS END=21052540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:20,0 chr1 21052541 . C . PASS END=21052546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 21052547 . C . PASS END=21052547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 21052548 . C . PASS END=21052554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 21052555 . A . PASS END=21052559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 21052693 . G T, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.325;ReadPosRankSum=2.950;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,12,0:0.667,0.000:18:0,7,0:6,5,0:46:85,0,46,421,215,636:255,0,178:5,0:5.0000e+01,1.0380e-04,4.8574e+01,4.2117e+02,2.4936e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,5,7:3,3,4,8 chr1 21053494 . C . PASS END=21053504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 21053505 . C . PASS END=21053505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:25,0 chr1 21053506 . G . PASS END=21053508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 21053509 . G . PASS END=21053518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,886:0,64,255:26,0 chr1 21053519 . A . PASS END=21053527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 21053528 . A . PASS END=21053528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 21053529 . G . PASS END=21053539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1072:0,90,255:30,0 chr1 21053540 . A . PASS END=21053540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 21053541 . G . PASS END=21053553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 21053554 . G . PASS END=21053568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 21053962 . C . PASS END=21054075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:34:0,82,1304:0,82,255:40,0 chr1 21054076 . C . PASS END=21054076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:27,0 chr1 21054077 . A . PASS END=21054084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1260:0,85,255:29,0 chr1 21054085 . G . PASS END=21054094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,71,255:26,0 chr1 21054095 . T . PASS END=21054096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:28:0,57,855:0,71,255:19,0 chr1 21054451 . C . PASS END=21054458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr1 21054459 . A . PASS END=21054459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,421:0,18,255:13,0 chr1 21054460 . C . PASS END=21054473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 21054474 . T . PASS END=21054474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 21054475 . G . PASS END=21054494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 21054495 . C . PASS END=21054498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 21054499 . G . PASS END=21054503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 21054504 . A . PASS END=21054506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 21054507 . C . PASS END=21054512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 21054513 . G . PASS END=21054536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,459:0,32,255:13,0 chr1 21054537 . T . PASS END=21054537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 21071290 . T . PASS END=21071300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 21071301 . C . PASS END=21071302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 21071303 . C . PASS END=21071345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,468:0,42,255:19,0 chr1 21071346 . T . PASS END=21071351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 21071352 . C . PASS END=21071354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 21071355 . T . PASS END=21071355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21071356 . T . PASS END=21071356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr1 21071357 . C . PASS END=21071360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21071361 . C . PASS END=21071361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 21071362 . A . PASS END=21071362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21071363 . C . PASS END=21071373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 21071374 . C . PASS END=21071385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr1 21071386 . G . PASS END=21071386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 21071387 . C . PASS END=21071401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,870:0,75,255:25,0 chr1 21071402 . T . PASS END=21071402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 21071403 . T . PASS END=21071408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 21071409 . C . PASS END=21071409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21071410 . T . PASS END=21071410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 21071411 . G . PASS END=21071487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1132:0,83,255:34,0 chr1 21071488 . C . PASS END=21071492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 21071493 . G . PASS END=21071493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 21071494 . G . PASS END=21071548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,933:0,72,255:26,0 chr1 21071549 . T . PASS END=21071564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:18,0 chr1 21071565 . C . PASS END=21071565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:15,0 chr1 21071566 . T . PASS END=21071584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:17,0 chr1 21072036 . C . PASS END=21072082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,108,1800:0,108,255:40,1 chr1 21072083 . C . PASS END=21072083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,9:81:71:81:0,71,2154:0,71,255:40,0 chr1 21072084 . T . PASS END=21072149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,183,255:40,0 chr1 21074037 . C . PASS END=21074148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:53:0,120,1800:0,142,255:40,0 chr1 21076216 . T . PASS END=21076375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:34:0,85,1135:0,85,255:40,0 chr1 21083659 . C . PASS END=21083675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1313:0,92,255:39,0 chr1 21083676 . C . PASS END=21083676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:37,0 chr1 21083677 . A . PASS END=21083720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1202:0,85,255:39,0 chr1 21083721 . T . PASS END=21083721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:26,0 chr1 21083722 . C . PASS END=21083727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 21083728 . A . PASS END=21083728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr1 21083729 . G . PASS END=21083739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr1 21083740 . C . PASS END=21083740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 21083741 . A . PASS END=21083742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 21083743 . C . PASS END=21083743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 21083744 . T . PASS END=21083744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 21083745 . G . PASS END=21083746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,831:0,55,255:19,0 chr1 21083747 . G . PASS END=21083747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 21083748 . G . PASS END=21083748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 21083749 . C . PASS END=21083749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 21091870 . C . PASS END=21091898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1080:0,90,255:40,0 chr1 21091899 . C . PASS END=21092024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,99,255:40,0 chr1 21094077 . C . PASS END=21094157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:80:0,120,1800:0,240,255:40,0 chr1 21097423 . C . PASS END=21097552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:39:0,81,1215:0,94,255:40,0 chr1 21097553 . T . PASS END=21097566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:67:28:0,67,962:0,67,255:26,0 chr1 21099944 . C . PASS END=21099944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 21099945 . T . PASS END=21099945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 21099946 . T . PASS END=21099952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr1 21099953 . C . PASS END=21099953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 21099954 . T . PASS END=21099954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 21099955 . C . PASS END=21099959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 21099960 . A . PASS END=21099960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 21099961 . A . PASS END=21099961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,942:0,48,255:25,0 chr1 21099962 . G . PASS END=21099962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 21099963 . A . PASS END=21099965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 21099966 . G . PASS END=21099967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr1 21099968 . A . PASS END=21099968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 21099969 . T . PASS END=21099970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 21099971 . C . PASS END=21099972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:29,0 chr1 21099973 . T . PASS END=21099973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:31,0 chr1 21099974 . C . PASS END=21099995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1161:0,89,255:38,0 chr1 21099996 . A . PASS END=21099996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 21099997 . T . PASS END=21100019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1332:0,92,255:38,0 chr1 21100020 . G . PASS END=21100020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:32,0 chr1 21100021 . C . PASS END=21100070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1116:0,87,255:35,0 chr1 21100071 . T . PASS END=21100071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 21100072 . T . PASS END=21100072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21100073 . C . PASS END=21100088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:26,0 chr1 21100089 . G . PASS END=21100103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:19,0 chr1 21102447 . C . PASS END=21102452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,3:126:99:124:0,120,1800:0,255,255:40,0 chr1 21102453 . G . PASS END=21102498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,1:124:99:112:0,120,1800:0,241,255:40,0 chr1 21103090 . T . PASS END=21103239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1327:0,84,255:40,0 chr1 21103240 . G . PASS END=21103240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 21103241 . G . PASS END=21103243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 21106305 . C . PASS END=21106308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 21106309 . C . PASS END=21106392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,94,255:40,0 chr1 21106393 . A . PASS END=21106404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:67:26:0,67,947:0,67,255:26,0 chr1 21106838 . C . PASS END=21106933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:41:0,87,1452:0,87,255:40,0 chr1 21133812 . T . PASS END=21133818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,909:0,62,255:26,0 chr1 21133819 . T . PASS END=21133990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1180:0,83,255:40,0 chr1 21133991 . A . PASS END=21133993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr1 21137231 . T . PASS END=21137234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 21137235 . A . PASS END=21137235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 21137236 . G . PASS END=21137244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 21137245 . A . PASS END=21137245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 21137246 . G . PASS END=21137248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21137249 . T . PASS END=21137249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 21137250 . T . PASS END=21137257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 21137258 . A . PASS END=21137258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 21137259 . T . PASS END=21137259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 21137260 . G . PASS END=21137264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 21137265 . T . PASS END=21137265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 21137266 . A . PASS END=21137322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:29:0,84,1202:0,86,255:36,0 chr1 21137323 . A . PASS END=21137323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1182:0,78,255:34,0 chr1 21137324 . T . PASS END=21137332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:36,0 chr1 21137333 . T . PASS END=21137333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:32,0 chr1 21137334 . C . PASS END=21137338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:33,0 chr1 21137339 . T . PASS END=21137339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:26,0 chr1 21137340 . G . PASS END=21137350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:29,0 chr1 21137351 . T . PASS END=21137351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 21137352 . G . PASS END=21137353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 21137354 . C . PASS END=21137354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 21137355 . C . PASS END=21137357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 21137358 . T . PASS END=21137373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 21137374 . T . PASS END=21137377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 21139651 . C . PASS END=21139732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,184,255:40,0 chr1 21143885 . C . PASS END=21143895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:31,0 chr1 21143896 . C . PASS END=21143896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 21143897 . A . PASS END=21143900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1140:0,93,255:31,0 chr1 21143901 . A . PASS END=21143901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 21143902 . T . PASS END=21143952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,1081:0,85,255:34,0 chr1 21143953 . A . PASS END=21143953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:30,0 chr1 21143954 . C . PASS END=21143992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1081:0,82,255:34,0 chr1 21143993 . A . PASS END=21144007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,64,255:25,0 chr1 21144008 . G . PASS END=21144021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,53,255:19,0 chr1 21144022 . A . PASS END=21144023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 21144024 . T . PASS END=21144025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr1 21144026 . C . PASS END=21144027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 21144028 . A . PASS END=21144031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 21151593 . C . PASS END=21151682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:41:0,95,1429:0,95,255:40,0 chr1 21151683 . C . PASS END=21151683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:40:42:0,40,1380:0,40,255:36,0 chr1 21151684 . T . PASS END=21151684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1418:0,76,255:36,0 chr1 21151685 . T . PASS END=21151691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,108,1490:0,110,255:38,0 chr1 21154110 . C . PASS END=21154191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,136,255:40,0 chr1 21155640 . A . PASS END=21155722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,117,1755:0,120,255:40,0 chr1 21155723 . A . PASS END=21155723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1502:0,78,255:37,0 chr1 21155724 . T . PASS END=21155760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:35:0,102,1282:0,102,255:40,0 chr1 21155761 . A . PASS END=21155761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:33,0 chr1 21155762 . A . PASS END=21155765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1260:0,105,255:35,0 chr1 21167349 . C . PASS END=21167349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:28,0 chr1 21167350 . C . PASS END=21167366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1027:0,83,255:32,0 chr1 21167367 . T . PASS END=21167374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1219:0,99,255:34,0 chr1 21167375 . T . PASS END=21167375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1014:0,71,255:32,0 chr1 21167376 . T . PASS END=21167403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,102,1450:0,105,255:40,0 chr1 21167404 . A G, 190.54 PASS DP=49;MQ=250.00;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,26,0:0,22,0:141:228,144,0,1795,144,1795:255,144,0:0,0:1.9054e+02,1.4054e+02,0.0000e+00,4.5000e+02,1.7531e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,22:0,0,30,18 chr1 21167405 . T . PASS END=21167441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,121,255:40,0 chr1 21167442 . A . PASS END=21167506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:41:0,87,1305:0,119,255:40,0 chr1 21167507 . A . PASS END=21167510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:60:35:0,60,900:0,105,255:20,0 chr1 21167511 . T . PASS END=21167521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:43:20:0,43,765:0,43,255:19,0 chr1 21175908 . C . PASS END=21176004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:53:0,93,1533:0,93,255:40,0 chr1 21176005 . G . PASS END=21176023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,134,255:40,0 chr1 21177751 . C . PASS END=21177751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 21177752 . T . PASS END=21177770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,823:0,69,255:25,0 chr1 21177771 . C . PASS END=21177771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:23,0 chr1 21177772 . G . PASS END=21177780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,947:0,70,255:26,0 chr1 21177781 . C . PASS END=21177838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,86,255:37,0 chr1 21177839 . C . PASS END=21177839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 21177840 . T . PASS END=21177888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1236:0,87,255:40,0 chr1 21177889 . T . PASS END=21177889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr1 21177890 . G . PASS END=21177959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1115:0,83,255:36,0 chr1 21177960 . A . PASS END=21177971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 21180053 . C . PASS END=21180053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 21180054 . T . PASS END=21180054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 21180055 . A . PASS END=21180058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 21180059 . A . PASS END=21180059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 21180060 . A . PASS END=21180143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:30:0,80,1103:0,80,255:40,0 chr1 21180144 . A . PASS END=21180170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:41:0,81,1215:0,109,255:40,0 chr1 21181471 . C . PASS END=21181553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1164:0,92,255:37,0 chr1 21181554 . T . PASS END=21181562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 21181563 . G . PASS END=21181564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:29:0,51,765:0,87,255:17,0 chr1 21183896 . C . PASS END=21183963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1081:0,92,255:39,0 chr1 21183964 . A . PASS END=21183967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:77:31:0,77,1086:0,77,255:26,0 chr1 21183968 . A . PASS END=21183987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 21183988 . C . PASS END=21183989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 21183990 . C . PASS END=21183990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21186878 . C . PASS END=21186991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,102,1575:0,102,255:40,0 chr1 21186992 . T . PASS END=21186992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1458:0,74,255:34,0 chr1 21186993 . T . PASS END=21186997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:40:0,99,1485:0,110,255:34,0 chr1 21186998 . A . PASS END=21186998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1297:0,78,255:32,0 chr1 21186999 . T . PASS END=21187008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,94,255:30,0 chr1 21187009 . C . PASS END=21187010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:34:0,72,1080:0,102,255:25,0 chr1 21188721 . C . PASS END=21188740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,111,1665:0,117,255:40,0 chr1 21188741 . C . PASS END=21188824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:37:0,90,1350:0,104,255:40,0 chr1 21188825 . G . PASS END=21188825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:28,0 chr1 21190969 . C . PASS END=21191205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1011:0,81,255:40,0 chr1 21191609 . A . PASS END=21191727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:30:0,84,1103:0,90,255:40,0 chr1 21191728 . C . PASS END=21191755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,79,255:26,0 chr1 21205775 . C . PASS END=21205975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:29:0,84,1210:0,86,255:40,0 chr1 21205976 . A . PASS END=21205989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1039:0,74,255:28,0 chr1 21205990 . A . PASS END=21205990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr1 21205991 . C . PASS END=21206006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 21206007 . A . PASS END=21206011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,75,255:18,0 chr1 21206012 . T . PASS END=21206012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:17,0 chr1 21206013 . C . PASS END=21206013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 21212694 . C . PASS END=21212864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:42:0,95,1414:0,95,255:40,0 chr1 21219112 . C . PASS END=21219112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 21219113 . C . PASS END=21219118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 21219119 . G . PASS END=21219128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1108:0,77,255:28,0 chr1 21219129 . T . PASS END=21219130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 21219131 . A . PASS END=21219131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 21219132 . T . PASS END=21219132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr1 21219133 . G . PASS END=21219136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 21219137 . G . PASS END=21219141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 21219142 . T . PASS END=21219142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 21219143 . G . PASS END=21219211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1149:0,83,255:39,0 chr1 21219212 . A . PASS END=21219222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,859:0,68,255:26,0 chr1 21220010 . A . PASS END=21220032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1213:0,98,255:37,0 chr1 21220033 . T . PASS END=21220033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:35,0 chr1 21220034 . C . PASS END=21220129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1255:0,81,255:40,0 chr1 21221861 . C . PASS END=21221879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:26,0 chr1 21221880 . C . PASS END=21221880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 21221881 . T . PASS END=21221881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 21221882 . G . PASS END=21221994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:30:0,83,1088:0,83,255:40,0 chr1 21226190 . C . PASS END=21226386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:37:0,89,1288:0,89,255:40,1 chr1 21226387 . T . PASS END=21226387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1837:0,79,255:40,0 chr1 21226388 . G . PASS END=21226425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1215:0,85,255:40,0 chr1 21226426 . T . PASS END=21226436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:31:0,63,945:0,77,255:25,0 chr1 21231376 . C . PASS END=21231464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:67:0,120,1800:0,190,255:40,0 chr1 21267752 . C . PASS END=21267757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,163,255:40,0 chr1 21267758 . G . PASS END=21267791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,146,255:40,0 chr1 21267869 . T . PASS END=21267888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,164,255:40,0 chr1 21267984 . C . PASS END=21268779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:88:38:0,88,1350:0,88,255:40,0 chr1 21268780 . T . PASS END=21268782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:33,1 chr1 21268783 . G . PASS END=21268801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1172:0,85,255:33,0 chr1 21268802 . G . PASS END=21268802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 21268803 . G . PASS END=21268811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1148:0,83,255:31,0 chr1 21268812 . T . PASS END=21268817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,1031:0,60,255:26,0 chr1 21268818 . T . PASS END=21268818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,979:0,59,255:25,0 chr1 21268819 . C . PASS END=21268823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:26:0,74,947:0,74,255:26,0 chr1 21276496 . C . PASS END=21276544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1156:0,84,255:38,0 chr1 21276545 . A . PASS END=21276545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:36,0 chr1 21276546 . G . PASS END=21276584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,82,255:37,0 chr1 21276585 . G . PASS END=21276604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr1 21295967 . C . PASS END=21296089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,120,1468:0,120,255:40,0 chr1 21299495 . A . PASS END=21299592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1057:0,87,255:40,0 chr1 21306827 . C . PASS END=21306856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,560:0,48,255:19,0 chr1 21306857 . G . PASS END=21306873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 21306874 . C . PASS END=21306912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:19,0 chr1 21306913 . C . PASS END=21306917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 21306918 . A . PASS END=21306918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr1 21306919 . T . PASS END=21306922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 21306923 . G . PASS END=21306939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,310:0,24,255:8,0 chr1 21306940 . T . PASS END=21306941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 21307541 . C . PASS END=21307542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 21307543 . G . PASS END=21307545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 21307546 . G . PASS END=21307574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:19,0 chr1 21307575 . G . PASS END=21307617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,732:0,66,255:23,0 chr1 21307618 . T . PASS END=21307619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 21307620 . G . PASS END=21307628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 21307629 . A . PASS END=21307629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 21307630 . C . PASS END=21307639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:22,0 chr1 21307640 . T . PASS END=21307640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 21307641 . G . PASS END=21307669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 21307670 . G . PASS END=21307683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:19,0 chr1 21307684 . T . PASS END=21307688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:12,0 chr1 21307689 . C . PASS END=21307692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:17:0,30,450:0,35,255:10,0 chr1 21307693 . G . PASS END=21307693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr1 21307694 . A . PASS END=21307696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:10,0 chr1 21307697 . C . PASS END=21307705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:13:0,21,315:0,25,255:9,0 chr1 21307706 . A . PASS END=21307712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:9:0,15,225:0,27,255:6,0 chr1 21307713 . T . PASS END=21307720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:9:9:0,9,135:0,27,255:3,0 chr1 21308881 . C . PASS END=21308901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,138,255:40,0 chr1 21324094 . C . PASS END=21324126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,126,255:40,0 chr1 21327692 . A . PASS END=21327805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,108,1457:0,114,255:40,0 chr1 21329206 . C . PASS END=21329301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:50:0,120,1800:0,150,255:40,0 chr1 21377359 . T . PASS END=21377363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 21377364 . A . PASS END=21377364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 21377365 . G . PASS END=21377366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 21377367 . G . PASS END=21377384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:19,0 chr1 21377385 . G . PASS END=21377396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 21377397 . T . PASS END=21377397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr1 21377398 . T . PASS END=21377398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21377399 . G . PASS END=21377399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 21377400 . C . PASS END=21377407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 21377408 . T . PASS END=21377409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 21377410 . T . PASS END=21377435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,825:0,66,255:23,0 chr1 21377436 . C . PASS END=21377469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:18:0,49,690:0,49,255:19,0 chr1 21377470 . T . PASS END=21377470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 21377471 . C . PASS END=21377477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 21377478 . C . PASS END=21377478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 21377479 . T . PASS END=21377487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 21415631 . C . PASS END=21415706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:32:0,89,1271:0,89,255:40,0 chr1 21502668 . T . PASS END=21502677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 21502678 . C . PASS END=21502679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 21502680 . T . PASS END=21502702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 21502703 . C . PASS END=21502744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 21503215 . C . PASS END=21503217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 21503218 . T . PASS END=21503218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 21503219 . C . PASS END=21503228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 21503229 . T . PASS END=21503229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 21503230 . C . PASS END=21503235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 21503236 . G . PASS END=21503236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 21503237 . G . PASS END=21503252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:11,0 chr1 21503253 . T . PASS END=21503253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 21503254 . C . PASS END=21503263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 21503264 . C . PASS END=21503264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 21503265 . T . PASS END=21503265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 21503266 . C . PASS END=21503266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 21503267 . C . PASS END=21503271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 21503272 . A . PASS END=21503272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 21503273 . G . PASS END=21503280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 21503281 . C . PASS END=21503281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,341:0,2,255:10,0 chr1 21503282 . G . PASS END=21503282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 21503283 . C . PASS END=21503283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 21503284 . C . PASS END=21503296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:10,0 chr1 21503297 . G . PASS END=21503298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 21503299 . G . PASS END=21503299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 21503300 . G . PASS END=21503317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,280:0,24,255:9,0 chr1 21503318 . G . PASS END=21503318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 21503319 . A . PASS END=21503329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,286:0,24,255:8,0 chr1 21544204 . C . PASS END=21544219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,856:0,72,255:24,0 chr1 21544220 . C . PASS END=21544220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21544221 . T . PASS END=21544221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 21544222 . G . PASS END=21544233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1057:0,87,255:30,0 chr1 21544234 . T . PASS END=21544234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 21544235 . G . PASS END=21544236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 21544237 . T . PASS END=21544237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 21544238 . T . PASS END=21544353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1155:0,80,255:40,0 chr1 21544354 . T . PASS END=21544354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 21544355 . C . PASS END=21544359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 21544360 . G . PASS END=21544360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 21544361 . G . PASS END=21544363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 21544364 . G . PASS END=21544366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 21544367 . G . PASS END=21544370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 21544371 . T . PASS END=21544372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 21544373 . T . PASS END=21544379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 21544380 . G . PASS END=21544390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 21544391 . C . PASS END=21544391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21544392 . C . PASS END=21544396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 21544397 . G . PASS END=21544412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 21544413 . G . PASS END=21544413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:25,0 chr1 21544414 . C . PASS END=21544423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:25,0 chr1 21544424 . G . PASS END=21544424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 21544425 . A . PASS END=21544438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 21544439 . T . PASS END=21544443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 21544444 . G . PASS END=21544445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 21544446 . A . PASS END=21544454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 21544455 . C . PASS END=21544459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 21544460 . A . PASS END=21544464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 21544465 . T . PASS END=21544467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 21544468 . G . PASS END=21544468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 21544469 . C . PASS END=21544471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,737:0,57,255:19,0 chr1 21546448 . T . PASS END=21546454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 21546455 . A . PASS END=21546455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 21546456 . C . PASS END=21546459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 21546460 . G . PASS END=21546460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 21546461 . C . PASS END=21546462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,399:0,39,255:13,0 chr1 21546463 . C . PASS END=21546471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:15,0 chr1 21546472 . C . PASS END=21546472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 21546473 . G . PASS END=21546474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 21546475 . G . PASS END=21546477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 21546478 . C . PASS END=21546478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 21546479 . A . PASS END=21546487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr1 21546488 . C . PASS END=21546488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 21546489 . C . PASS END=21546507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 21546508 . T . PASS END=21546512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21546513 . A . PASS END=21546513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 21546514 . G . PASS END=21546519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 21546520 . C . PASS END=21546520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 21546521 . T . PASS END=21546552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1009:0,84,255:31,0 chr1 21546553 . G . PASS END=21546553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 21546554 . C . PASS END=21546566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1095:0,93,255:31,0 chr1 21546567 . G . PASS END=21546567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 21546568 . G . PASS END=21546582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:31,0 chr1 21546583 . G . PASS END=21546612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:27,0 chr1 21546613 . G . PASS END=21546624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,56,255:19,0 chr1 21548240 . C . PASS END=21548241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr1 21548242 . G . PASS END=21548244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 21548245 . C . PASS END=21548248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 21548249 . G . PASS END=21548250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21548251 . C . PASS END=21548252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 21548253 . A . PASS END=21548255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21548256 . A . PASS END=21548262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 21548263 . G . PASS END=21548332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1158:0,93,255:34,0 chr1 21548333 . A . PASS END=21548335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 21551743 . C . PASS END=21551762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 21551763 . C . PASS END=21551763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 21551764 . C . PASS END=21551765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 21551766 . C . PASS END=21551766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 21551767 . G . PASS END=21551770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 21551771 . T . PASS END=21551771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 21551772 . C . PASS END=21551826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,559:0,41,255:19,0 chr1 21551827 . G . PASS END=21551838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 21551839 . C . PASS END=21551840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 21551841 . G . PASS END=21551853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 21551854 . C . PASS END=21551854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 21551855 . T . PASS END=21551923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:15:0,44,551:0,44,255:18,0 chr1 21551924 . T . PASS END=21551933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 21553652 . C . PASS END=21553719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:97:37:0,97,1329:0,97,255:40,0 chr1 21554424 . T . PASS END=21554534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,99,1413:0,101,255:40,0 chr1 21560051 . T . PASS END=21560055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 21560056 . T . PASS END=21560056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 21560057 . C . PASS END=21560154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1072:0,87,255:40,0 chr1 21562343 . G . PASS END=21562420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,107,1665:0,107,255:40,0 chr1 21563239 . C . PASS END=21563337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:94:47:0,94,1598:0,94,255:40,0 chr1 21564627 . T . PASS END=21564630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 21564631 . C . PASS END=21564631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 21564632 . T . PASS END=21564632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 21564633 . C . PASS END=21564636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 21564637 . C . PASS END=21564637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 21564638 . T . PASS END=21564734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1141:0,80,255:40,0 chr1 21564735 . G . PASS END=21564735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:32,0 chr1 21564736 . G . PASS END=21564737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 21571482 . C . PASS END=21571485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1287:0,105,255:35,0 chr1 21571486 . T . PASS END=21571486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 21571487 . T . PASS END=21571562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:35:0,104,1288:0,104,255:40,0 chr1 21571563 . C . PASS END=21571594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,102,255:40,0 chr1 21571595 . G . PASS END=21571596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,1035:0,63,255:23,0 chr1 21573714 . C . PASS END=21573717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,609:0,54,255:19,0 chr1 21573718 . T . PASS END=21573737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,846:0,61,255:26,0 chr1 21573738 . G . PASS END=21573804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,952:0,84,255:35,0 chr1 21573805 . G . PASS END=21573805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:27,0 chr1 21573806 . G . PASS END=21573827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1057:0,87,255:30,0 chr1 21573828 . G . PASS END=21573837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 21573838 . T . PASS END=21573839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 21573840 . A . PASS END=21573847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 21573848 . T . PASS END=21573852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 21573853 . A . PASS END=21573856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 21582440 . C . PASS END=21582455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 21582456 . G . PASS END=21582456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 21582457 . T . PASS END=21582462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,562:0,51,255:18,0 chr1 21582463 . T . PASS END=21582477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,625:0,54,255:19,0 chr1 21582478 . C . PASS END=21582478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21582479 . C . PASS END=21582480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 21582481 . C . PASS END=21582481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21582482 . A . PASS END=21582482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 21582483 . T . PASS END=21582485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 21582486 . C . PASS END=21582486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 21582487 . G . PASS END=21582536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,860:0,61,255:25,0 chr1 21582537 . A . PASS END=21582537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 21582538 . A . PASS END=21582563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,711:0,63,255:22,0 chr1 21582564 . G . PASS END=21582607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 21582608 . G . PASS END=21582608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 21582609 . T . PASS END=21582609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 21582610 . A . PASS END=21582611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 21582612 . T . PASS END=21582612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr1 21582613 . T . PASS END=21582631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 21584018 . C . PASS END=21584083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:54:0,120,1800:0,153,255:40,0 chr1 21585186 . C . PASS END=21585186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1250:0,105,255:35,0 chr1 21585187 . T . PASS END=21585187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1054:0,55,255:32,0 chr1 21585188 . G . PASS END=21585189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1349:0,98,255:38,0 chr1 21585190 . A . PASS END=21585190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1233:0,64,255:35,0 chr1 21585191 . T . PASS END=21585198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1305:0,97,255:39,0 chr1 21585199 . C . PASS END=21585199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1307:0,73,255:38,0 chr1 21585200 . T . PASS END=21585292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:38:0,90,1314:0,90,255:40,0 chr1 21585293 . T . PASS END=21585293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:35,0 chr1 21585294 . G . PASS END=21585332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,92,255:35,0 chr1 21586764 . C . PASS END=21586791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr1 21586792 . G . PASS END=21586811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:18,0 chr1 21586812 . G . PASS END=21586815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 21586816 . T . PASS END=21586822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,636:0,43,255:19,0 chr1 21586823 . T . PASS END=21586823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21586824 . G . PASS END=21586825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 21586826 . A . PASS END=21586828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 21586829 . C . PASS END=21586832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 21586833 . G . PASS END=21586836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 21586837 . T . PASS END=21586839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 21586840 . A . PASS END=21586848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 21586849 . T . PASS END=21586849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 21586850 . T . PASS END=21586852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 21586853 . T . PASS END=21586853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 21586854 . C . PASS END=21586857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 21586858 . G . PASS END=21586885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 21599192 . C . PASS END=21599193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 21599194 . A . PASS END=21599194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 21599195 . G . PASS END=21599221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,862:0,61,255:26,0 chr1 21599222 . G . PASS END=21599287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,956:0,81,255:31,0 chr1 21599288 . A . PASS END=21599288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 21599289 . G . PASS END=21599289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21599290 . C . PASS END=21599290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 21599291 . C . PASS END=21599291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21599292 . C . PASS END=21599297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 21599298 . G . PASS END=21599309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 21599310 . G . PASS END=21599314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 21599315 . C . PASS END=21599318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 21599319 . G . PASS END=21599319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 21599320 . C . PASS END=21599328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 21599329 . A . PASS END=21599352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,937:0,62,255:26,0 chr1 21599353 . A . PASS END=21599353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 21599354 . T . PASS END=21599360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:22,0 chr1 21599361 . G . PASS END=21599381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,674:0,44,255:19,0 chr1 21599382 . G . PASS END=21599382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 21599383 . C . PASS END=21599389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 21599390 . A . PASS END=21599404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,38,255:13,0 chr1 21605684 . T . PASS END=21605704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 21605705 . G . PASS END=21605721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,535:0,42,255:19,0 chr1 21605722 . A . PASS END=21605723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 21605724 . C . PASS END=21605725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 21605726 . G . PASS END=21605756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:24,0 chr1 21605757 . C . PASS END=21605757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 21605758 . A . PASS END=21605780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 21605781 . T . PASS END=21605781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 21605782 . G . PASS END=21605822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 21605823 . C . PASS END=21605823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 21605824 . A . PASS END=21605824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 21605825 . C . PASS END=21605826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 21605827 . T . PASS END=21605848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 21605849 . G . PASS END=21605849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 21605850 . C . PASS END=21605850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:18,0 chr1 21605851 . G . PASS END=21605860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 21605861 . T . PASS END=21605861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21605862 . G . PASS END=21605890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,620:0,45,255:17,0 chr1 21605891 . A . PASS END=21605913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 21605914 . C . PASS END=21605927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 21616563 . C . PASS END=21616565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 21616566 . C . PASS END=21616566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 21616567 . A . PASS END=21616576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 21616577 . G . PASS END=21616577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 21616578 . G . PASS END=21616598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 21616599 . C . PASS END=21616615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:24,0 chr1 21616616 . C . PASS END=21616616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 21616617 . C . PASS END=21616654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,862:0,72,255:25,0 chr1 21616655 . A . PASS END=21616657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 21616658 . C . PASS END=21616659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 21616660 . A . PASS END=21616674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 21616675 . T . PASS END=21616691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr1 21616857 . C . PASS END=21616861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 21616862 . G . PASS END=21616862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 21616863 . C . PASS END=21616890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 21616891 . G . PASS END=21616891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 21616892 . G . PASS END=21616905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 21616906 . A . PASS END=21616906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 21616907 . T . PASS END=21616907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 21625310 . C . PASS END=21625318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,122,255:40,0 chr1 21655699 . T . PASS END=21655773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,167,255:40,0 chr1 21671869 . C . PASS END=21671871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 21771580 . A . PASS END=21771621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,560:0,48,255:19,0 chr1 21771622 . C . PASS END=21771622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 21771623 . G . PASS END=21771627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 21771628 . C . PASS END=21771628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 21771629 . C . PASS END=21771629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 21771630 . T . PASS END=21771663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,815:0,63,255:22,0 chr1 21771664 . G . PASS END=21771674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 21771675 . T . PASS END=21771712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,398:0,36,255:12,0 chr1 21776284 . A . PASS END=21776286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21776287 . T . PASS END=21776287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 21776288 . G . PASS END=21776290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 21776291 . A . PASS END=21776291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:28,0 chr1 21776352 . G . PASS END=21776354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 21776355 . G . PASS END=21776380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:44:0,84,1260:0,122,255:40,0 chr1 21792580 . G . PASS END=21792597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr1 21792598 . C . PASS END=21792598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 21792599 . G . PASS END=21792608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 21795181 . T . PASS END=21795195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:30,0 chr1 21795196 . C . PASS END=21795196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 21795197 . T . PASS END=21795198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 21795199 . C . PASS END=21795199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 21795200 . T . PASS END=21795305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,997:0,80,255:35,0 chr1 21795306 . A . PASS END=21795306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 21795307 . A . PASS END=21795350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1086:0,80,255:32,0 chr1 21795351 . C . PASS END=21795354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 21795355 . T . PASS END=21795368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,953:0,62,255:26,0 chr1 21795369 . G . PASS END=21795369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:21,0 chr1 21795370 . C . PASS END=21795387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 21795388 . A G, 46.71 PASS DP=24;MQ=249.51;MQRankSum=3.101;ReadPosRankSum=1.193;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:8,3,0:7,6,0:46:81,0,50,322,537,858:255,0,255:13,0:4.6707e+01,1.1442e-04,5.3000e+01,3.2189e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,13,1,8:7,8,5,4 chr1 21795389 . C . PASS END=21795390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 21797125 . A . PASS END=21797127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 21797128 . A . PASS END=21797129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 21797130 . G . PASS END=21797136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 21797137 . G . PASS END=21797137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 21797138 . C . PASS END=21797152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 21797153 . A . PASS END=21797155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 21797156 . T . PASS END=21797156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 21797157 . A . PASS END=21797186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr1 21797187 . G . PASS END=21797222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:19,0 chr1 21797223 . C . PASS END=21797227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 21798062 . G . PASS END=21798063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 21798064 . A . PASS END=21798064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 21798065 . A . PASS END=21798249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,90,255:40,0 chr1 21798250 . A . PASS END=21798250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 21798251 . G . PASS END=21798268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 21798269 . C . PASS END=21798276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:23,0 chr1 21799336 . A . PASS END=21799375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,101,1388:0,101,255:40,0 chr1 21799376 . G . PASS END=21799406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:36:0,81,1215:0,91,255:40,0 chr1 21799407 . A . PASS END=21799408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,92,255:26,0 chr1 21799873 . G . PASS END=21800062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:84:35:0,84,1260:0,99,255:40,0 chr1 21800063 . G . PASS END=21800065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,990:0,89,255:25,0 chr1 21800066 . T . PASS END=21800067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:57:34:0,57,855:0,102,255:19,0 chr1 21800068 . C . PASS END=21800068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:20,0 chr1 21800069 . A . PASS END=21800078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:20:0,54,810:0,60,255:18,0 chr1 21801393 . A . PASS END=21801444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:36:0,87,1311:0,87,255:40,0 chr1 21804562 . A . PASS END=21804562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 21804563 . T . PASS END=21804563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,799:0,33,255:23,0 chr1 21804564 . C . PASS END=21804565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 21804566 . T . PASS END=21804777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1094:0,87,255:40,0 chr1 21804778 . C . PASS END=21804800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:37:0,82,1248:0,82,255:39,0 chr1 21805842 . G . PASS END=21805875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:33:0,99,1227:0,99,255:36,0 chr1 21805876 . A . PASS END=21805876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:31,0 chr1 21805877 . G . PASS END=21805885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:33,0 chr1 21805886 . A . PASS END=21805888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 21805889 . C . PASS END=21805893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,82,255:28,0 chr1 21806544 . G . PASS END=21806618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:19,0 chr1 21806619 . T . PASS END=21806619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 21806620 . T . PASS END=21806620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 21806621 . T . LowGQ END=21806621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,549:1,0,255:16,0 chr1 21806622 . T . PASS END=21806623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 21806624 . A . PASS END=21806624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:14,0 chr1 21806625 . G . PASS END=21806632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 21806633 . A . PASS END=21806633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 21806634 . A . PASS END=21806634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 21806635 . C . PASS END=21806636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 21806637 . G . PASS END=21806637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 21806638 . C . PASS END=21806687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,566:0,48,255:16,0 chr1 21806688 . A . PASS END=21806698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:35:15:0,35,540:0,35,255:14,0 chr1 21806699 . T . PASS END=21806699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 21806700 . G . PASS END=21806713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 21806714 . A . PASS END=21806716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 21807423 . G . PASS END=21807426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 21807427 . G . PASS END=21807427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 21807428 . A . PASS END=21807442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 21807443 . G . PASS END=21807443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 21807444 . A . PASS END=21807444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 21807445 . G . PASS END=21807445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 21807446 . G . PASS END=21807457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 21807458 . G . PASS END=21807459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 21807460 . C . PASS END=21807464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 21807465 . C . PASS END=21807474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 21808090 . G . PASS END=21808104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,388:0,33,255:13,0 chr1 21808105 . G . PASS END=21808121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 21808122 . C . PASS END=21808132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 21808133 . C . PASS END=21808149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 21808150 . A . LowGQ END=21808150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:11,0 chr1 21808151 . T . PASS END=21808158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 21808159 . G A, 15.98 PASS DP=12;MQ=27.04;MQRankSum=-1.294;ReadPosRankSum=2.404;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,3,0:0.250,0.000:12:7,1,0:2,2,0:16:51,0,31,107,322,429:80,0,255:9,0:1.5976e+01,1.1284e-01,3.4113e+01,1.0742e+02,3.5672e+02,4.3230e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,0,3:4,5,2,1 chr1 21808160 . A . PASS END=21808195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr1 21808196 . C . PASS END=21808204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 21808205 . G . PASS END=21808206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 21808207 . A C, 21.91 PASS DP=10;MQ=26.16;MQRankSum=-0.895;ReadPosRankSum=1.214;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,3,0:0.300,0.000:10:5,1,0:2,2,0:22:57,0,31,107,247,355:86,0,233:4,0:2.1913e+01,2.9913e-02,3.3697e+01,1.0734e+02,2.8207e+02,3.5761e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,0,3:4,3,2,1 chr1 21808208 . A . PASS END=21808222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:6,0 chr1 21808223 . T C, 11.33 PASS DP=5;MQ=23.91;MQRankSum=-1.231;ReadPosRankSum=1.231;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,2,0:0.400,0.000:5:2,0,0:1,2,0:11:46,0,29,72,107,179:62,0,101:2,0:1.1325e+01,3.3521e-01,3.2335e+01,7.1871e+01,1.4236e+02,1.8213e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,0,2:2,1,2,0 chr1 21808224 . T . PASS END=21808226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 21808227 . A . PASS END=21808260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,78:3,0 chr1 21808261 . T . PASS END=21808262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:1,0 chr1 21808977 . A . LowDepth;LowGQ END=21809028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 21809636 . G . PASS END=21809642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 21809643 . G . PASS END=21809673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:18:0,47,753:0,47,255:19,0 chr1 21809674 . T . PASS END=21809674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,541:0,34,255:16,0 chr1 21809675 . C . PASS END=21809686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 21809687 . A . PASS END=21809687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 21809688 . C . PASS END=21809689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 21809690 . G . PASS END=21809699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,31,255:13,0 chr1 21809700 . T . PASS END=21809700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 21809701 . A . PASS END=21809707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 21809708 . T . PASS END=21809708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 21809709 . A . PASS END=21809712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 21809713 . C . PASS END=21809713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 21809714 . A . PASS END=21809714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 21809715 . A . PASS END=21809724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 21809725 . A . PASS END=21809733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:10:0,22,405:0,22,255:9,0 chr1 21809734 . C . PASS END=21809749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:6:0,15,225:0,18,233:6,0 chr1 21809750 . T C, 56.47 PASS DP=7;MQ=29.72;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,4,0:0,3,0:18:94,21,0,270,21,270:255,21,0:0,0:5.6468e+01,1.8135e+01,6.7273e-02,2.6711e+02,5.2905e+01,2.7011e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,7:0,0,3,4 chr1 21809751 . A . PASS END=21809755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr1 21809756 . T . PASS END=21809756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 21809757 . G . PASS END=21809768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 21809769 . T . PASS END=21809769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,117:0,1,117:5,0 chr1 21809770 . T . PASS END=21809787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 21809788 . G . PASS END=21809833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:6,0 chr1 21809834 . A . PASS END=21809879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 21835939 . C . PASS END=21835939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 21880494 . G . PASS END=21880494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 21880524 . C . PASS END=21880524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 21880575 . A . PASS END=21880635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:44:0,99,1438:0,99,255:40,0 chr1 21880637 . T . PASS END=21880637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr1 21887119 . A . PASS END=21887238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:34:0,85,1079:0,85,255:40,0 chr1 21887588 . A . PASS END=21887588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 21887590 . G . PASS END=21887705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:36:0,91,1243:0,91,255:40,0 chr1 21887707 . T . PASS END=21887707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1462:0,87,255:36,0 chr1 21889603 . A . PASS END=21889623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 21889624 . G . PASS END=21889634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,607:0,48,255:17,0 chr1 21889635 . T C, 98.17 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,6,0:0,11,0:48:136,51,0,659,51,659:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,8:0,0,8,9 chr1 21889636 . G . PASS END=21889672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,599:0,40,255:19,0 chr1 21889673 . C . PASS END=21889684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 21889685 . C . PASS END=21889687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 21889688 . T . PASS END=21889705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 21889706 . C . PASS END=21889706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 21889707 . T . PASS END=21889722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 21889723 . A . PASS END=21889723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 21889724 . A . PASS END=21889724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 21889725 . C . PASS END=21889726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 21889727 . C . PASS END=21889741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr1 21889742 . A . PASS END=21889742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr1 21889743 . G . PASS END=21889760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 21889761 . C . PASS END=21889771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,360:0,20,255:9,0 chr1 21889772 . A . PASS END=21889772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 21889773 . C . PASS END=21889774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 21889775 . C . PASS END=21889775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 21889776 . T . PASS END=21889777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 21889782 . G . PASS END=21889782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 21890534 . G . PASS END=21890535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 21890536 . A . PASS END=21890536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,180:0,7,180:6,0 chr1 21890537 . A . PASS END=21890539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 21890540 . C . PASS END=21890540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,227:6,0 chr1 21890541 . T . PASS END=21890541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:5,0 chr1 21890542 . G . PASS END=21890557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 21890558 . C . PASS END=21890559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 21890560 . A . PASS END=21890560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 21890561 . C . PASS END=21890563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 21890564 . G . PASS END=21890569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,431:0,42,255:14,0 chr1 21890570 . A . PASS END=21890570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 21890571 . C . PASS END=21890589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:18,0 chr1 21890590 . G . PASS END=21890592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21890593 . T . PASS END=21890593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 21890594 . A . PASS END=21890594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21890595 . C . PASS END=21890596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 21890597 . C . PASS END=21890601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21890602 . T . PASS END=21890602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr1 21890603 . C . PASS END=21890604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21890605 . G . PASS END=21890605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 21890606 . C . PASS END=21890655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:24,0 chr1 21890656 . C . PASS END=21890698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr1 21890699 . G . PASS END=21890710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 21894586 . G . PASS END=21894586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 21894597 . G . PASS END=21894665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,99,1550:0,99,255:40,0 chr1 21894666 . G . PASS END=21894666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,8:52:23:52:0,23,1362:0,23,255:40,0 chr1 21894667 . A . PASS END=21894719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:39:0,85,1485:0,85,255:40,0 chr1 21894720 . A . PASS END=21894722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr1 21894723 . T . PASS END=21894740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:34,0 chr1 21896788 . T . PASS END=21896788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 21896796 . A . PASS END=21896804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1390:0,87,255:38,0 chr1 21896805 . A . PASS END=21896866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1251:0,97,255:40,0 chr1 21896867 . G . PASS END=21896868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:31,0 chr1 21900158 . G . PASS END=21900295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,102,1435:0,102,255:40,0 chr1 21902224 . A . PASS END=21902224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,881:0,78,255:26,0 chr1 21902226 . G . PASS END=21902226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 21902227 . A . PASS END=21902230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 21902231 . A . PASS END=21902231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 21902232 . G . PASS END=21902240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr1 21902241 . A . PASS END=21902241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 21902242 . C . PASS END=21902245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 21902246 . C . PASS END=21902247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 21902248 . C . PASS END=21902253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 21902254 . A . PASS END=21902254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:29,0 chr1 21902255 . G . PASS END=21902266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:31,0 chr1 21902267 . C . PASS END=21902267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 21902268 . A . PASS END=21902271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 21902272 . C . PASS END=21902272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 21902273 . C . PASS END=21902323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,89,255:35,0 chr1 21902324 . A . PASS END=21902324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 21902325 . C . PASS END=21902328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:33,0 chr1 21902329 . C . PASS END=21902331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1294:0,69,255:30,0 chr1 21902332 . G . PASS END=21902351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1145:0,80,255:30,0 chr1 21902352 . T . PASS END=21902384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 21902385 . G . PASS END=21902402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,698:0,47,255:19,0 chr1 21902403 . G . PASS END=21902411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,613:0,40,255:19,0 chr1 21902412 . T . PASS END=21902412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 21902413 . C . PASS END=21902417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:16,0 chr1 21903013 . A . PASS END=21903013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 21903015 . G . PASS END=21903033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr1 21903034 . T . PASS END=21903034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 21903035 . G . PASS END=21903115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1109:0,80,255:38,1 chr1 21903116 . G . PASS END=21903117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,938:0,60,255:26,0 chr1 21903118 . C . PASS END=21903118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 21903119 . T . PASS END=21903134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,65,255:23,0 chr1 21903147 . G . PASS END=21903147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 21903876 . C . PASS END=21903891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 21903892 . G . PASS END=21903922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 21903923 . A . PASS END=21903923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 21903924 . C . PASS END=21903926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 21903927 . A . PASS END=21903936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:18,0 chr1 21903937 . G . PASS END=21903940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 21903941 . G . PASS END=21903953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,714:0,57,255:19,0 chr1 21903954 . C . PASS END=21903966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:22,0 chr1 21903967 . G . PASS END=21903967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 21903968 . G . PASS END=21903974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr1 21903975 . T . PASS END=21903975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 21903976 . G . PASS END=21903980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:25,0 chr1 21903981 . A . PASS END=21903981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 21903982 . C . PASS END=21903983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,953:0,75,255:25,0 chr1 21903984 . G . PASS END=21903984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 21903985 . C . PASS END=21903989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 21903990 . A . PASS END=21903990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 21903991 . C . PASS END=21904006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 21904007 . C . PASS END=21904009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 21904010 . C . PASS END=21904042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 21904043 . A . PASS END=21904043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 21904044 . A . PASS END=21904077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,893:0,62,255:26,0 chr1 21904078 . C . PASS END=21904082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 21904083 . T . PASS END=21904095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,62,255:21,0 chr1 21904096 . C . PASS END=21904096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 21904097 . C . PASS END=21904099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21904100 . C . PASS END=21904100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 21904101 . T . PASS END=21904105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21904106 . G . PASS END=21904106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 21904107 . C . PASS END=21904109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 21904110 . T . PASS END=21904124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 21904125 . T . PASS END=21904125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,676:0,32,255:18,0 chr1 21904126 . G . PASS END=21904129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 21904130 . G . PASS END=21904141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr1 21904148 . A . PASS END=21904148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 21904153 . C . PASS END=21904153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 21904194 . C . PASS END=21904194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 21904206 . C . PASS END=21904206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 21904484 . C . PASS END=21904484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 21904572 . C . PASS END=21904572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 21904825 . A . PASS END=21904826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,148,255:40,1 chr1 21904838 . C . PASS END=21904838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 21904893 . A . PASS END=21904893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:99:60:0,120,1800:0,130,255:40,0 chr1 21924213 . C . PASS END=21924221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:36:0,95,1341:0,95,255:37,0 chr1 21924454 . C . PASS END=21924460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:18,0 chr1 21924461 . G . PASS END=21924476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:21,0 chr1 21924477 . A . PASS END=21924482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 21924483 . C . PASS END=21924483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21924484 . C . PASS END=21924484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 21924485 . A . PASS END=21924486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21924487 . C . PASS END=21924491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:19,0 chr1 21924492 . T . PASS END=21924492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:18,0 chr1 21924493 . C . PASS END=21924512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:19,0 chr1 21924513 . G . PASS END=21924513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21924514 . G . PASS END=21924521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 21924522 . A . PASS END=21924522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,542:0,29,255:18,0 chr1 21924523 . C . PASS END=21924527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,654:0,44,255:19,0 chr1 21924528 . C . PASS END=21924528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,566:0,10,255:17,0 chr1 21924529 . G . PASS END=21924533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 21924534 . C . PASS END=21924536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 21924537 . G . PASS END=21924557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 21924893 . C . PASS END=21924909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:24,0 chr1 21924910 . C . PASS END=21924910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:23,0 chr1 21924911 . T . PASS END=21924915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:25,0 chr1 21924916 . G . PASS END=21924916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:23,0 chr1 21924917 . T . PASS END=21924926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:25:0,61,870:0,61,255:27,0 chr1 21924927 . G . PASS END=21924928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1082:0,93,255:31,0 chr1 21924929 . C . PASS END=21924929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 21924930 . C . PASS END=21924937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:31,0 chr1 21924938 . A . PASS END=21924938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 21924939 . C . PASS END=21924939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 21924940 . G . PASS END=21924940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 21924941 . T . PASS END=21924941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 21924942 . G . PASS END=21924943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1041:0,76,255:29,0 chr1 21924944 . T . PASS END=21924951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:31,0 chr1 21924952 . A . PASS END=21924953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,967:0,79,255:31,0 chr1 21924954 . G . PASS END=21924955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 21924956 . A . PASS END=21924957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1005:0,79,255:30,0 chr1 21924958 . T . PASS END=21924958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1011:0,49,255:29,0 chr1 21924959 . C . PASS END=21924959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1196:0,96,255:32,0 chr1 21924960 . C . PASS END=21924960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1063:0,49,255:30,0 chr1 21924961 . C . PASS END=21924961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 21924962 . G . PASS END=21924963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:32,0 chr1 21924964 . T . PASS END=21924965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 21924966 . G . PASS END=21924968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 21924969 . G . PASS END=21924969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr1 21924970 . G . PASS END=21924972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:29,0 chr1 21924973 . G . PASS END=21924980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 21924981 . G . PASS END=21924982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 21924983 . A . PASS END=21924983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:25,0 chr1 21924984 . T . PASS END=21924984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21924985 . G . PASS END=21924995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 21925987 . C . PASS END=21925994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 21925995 . T . PASS END=21925995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:15,0 chr1 21925996 . G . PASS END=21926003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,601:0,51,255:19,0 chr1 21926004 . C . PASS END=21926004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 21926005 . G . PASS END=21926045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,726:0,63,255:25,0 chr1 21926046 . T . PASS END=21926046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 21926047 . G . PASS END=21926099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:25,0 chr1 21926100 . C . PASS END=21926107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,1 chr1 21926108 . G . LowGQ END=21926108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,771:1,0,255:19,1 chr1 21926109 . C . PASS END=21926109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 21926110 . T . PASS END=21926110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 21928177 . C . PASS END=21928219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 21928220 . A . PASS END=21928220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 21928221 . G . PASS END=21928222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 21928223 . T . PASS END=21928223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,480:0,31,255:13,0 chr1 21928224 . C . PASS END=21928251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 21928252 . C . PASS END=21928252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 21928253 . C . PASS END=21928254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 21928255 . C . PASS END=21928285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 21928286 . T . PASS END=21928289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 21928290 . C . PASS END=21928290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 21929297 . C . PASS END=21929297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 21929298 . T . PASS END=21929299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr1 21929300 . T . PASS END=21929300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 21929301 . T . PASS END=21929321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:24,0 chr1 21929322 . T . PASS END=21929322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,805:0,56,255:23,0 chr1 21929323 . C . PASS END=21929389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,848:0,72,255:25,0 chr1 21929390 . C . PASS END=21929406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,698:0,50,255:19,0 chr1 21930151 . C . PASS END=21930151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 21930152 . A . PASS END=21930152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 21930153 . G . PASS END=21930157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:17,0 chr1 21930158 . C . PASS END=21930158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 21930159 . A . PASS END=21930160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 21930161 . A . PASS END=21930161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 21930162 . G . PASS END=21930162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 21930163 . C . PASS END=21930163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr1 21930164 . A . PASS END=21930164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 21930165 . G . PASS END=21930165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 21930166 . G . PASS END=21930167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:16,0 chr1 21930168 . G . PASS END=21930168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 21930169 . C . PASS END=21930169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 21930170 . T . PASS END=21930171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,661:0,21,255:19,0 chr1 21930172 . A . PASS END=21930173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,659:0,41,255:19,0 chr1 21930174 . T . PASS END=21930175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 21930176 . C . PASS END=21930176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21930177 . C . PASS END=21930178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 21930179 . T . PASS END=21930179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21930180 . C . PASS END=21930180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 21930181 . G . PASS END=21930181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:19,0 chr1 21930182 . G . PASS END=21930182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:18,0 chr1 21930183 . A . PASS END=21930183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 21930184 . G . PASS END=21930184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21930185 . C . PASS END=21930186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 21930187 . G . PASS END=21930187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr1 21930188 . C . PASS END=21930197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,876:0,69,255:25,0 chr1 21930198 . A . PASS END=21930198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21930199 . T . PASS END=21930207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 21930208 . C . PASS END=21930212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:29,0 chr1 21930213 . G . PASS END=21930213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 21930214 . G . PASS END=21930379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:30:0,83,1131:0,83,255:40,0 chr1 21930380 . G . PASS END=21930380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:30,0 chr1 21930381 . C . PASS END=21930396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:32,0 chr1 21930397 . A . PASS END=21930397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:26,0 chr1 21930398 . A . PASS END=21930399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:27,0 chr1 21930400 . C . PASS END=21930401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 21930402 . A . PASS END=21930405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 21932559 . T . PASS END=21932559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:29,0 chr1 21932560 . A . PASS END=21932561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 21932562 . T . PASS END=21932562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1137:0,66,255:31,0 chr1 21932563 . C . PASS END=21932567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:31,0 chr1 21932568 . C . PASS END=21932675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1135:0,87,255:40,0 chr1 21932676 . G . PASS END=21932690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:26:0,63,945:0,74,255:25,0 chr1 21934706 . C . PASS END=21934706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,601:0,43,255:19,0 chr1 21934707 . T . PASS END=21934708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,630:0,60,255:20,0 chr1 21934709 . G . PASS END=21934709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:19,0 chr1 21934710 . A . PASS END=21934711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 21934712 . A . PASS END=21934713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 21934714 . A . PASS END=21934714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 21934715 . C . PASS END=21934715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 21934716 . T . PASS END=21934716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 21934717 . C . PASS END=21934717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 21934718 . A . PASS END=21934720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:62:21:0,62,628:0,62,255:21,0 chr1 21934721 . G . PASS END=21934724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:20,0 chr1 21934725 . C . PASS END=21934725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 21934726 . C . PASS END=21934736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,714:0,46,255:19,0 chr1 21934737 . C . PASS END=21934740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 21934741 . C . PASS END=21934741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 21934742 . A . PASS END=21934748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 21934749 . A . PASS END=21934750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 21934751 . C . PASS END=21934751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 21934752 . T . PASS END=21934752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 21934753 . T . PASS END=21934761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 21934762 . C . PASS END=21934776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:18:0,46,684:0,46,255:19,0 chr1 21934777 . T . PASS END=21934777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,435:0,4,255:12,0 chr1 21934778 . C . PASS END=21934783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 21934784 . C . PASS END=21934787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 21934788 . C . PASS END=21934790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 21934791 . T . PASS END=21934809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,32,255:13,0 chr1 21934810 . A . PASS END=21934810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 21934811 . G . PASS END=21934831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 21934832 . C . PASS END=21934832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 21934833 . C . PASS END=21934838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 21934839 . C . PASS END=21934843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 21935343 . C . PASS END=21935429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,114,1643:0,114,255:40,0 chr1 21936068 . C . PASS END=21936075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 21936076 . A . PASS END=21936092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,247:0,21,247:8,0 chr1 21936093 . A . PASS END=21936093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 21936094 . G . PASS END=21936125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,274:0,24,255:9,0 chr1 21936126 . G . PASS END=21936132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 21936133 . C . PASS END=21936133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 21936134 . A . PASS END=21936136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 21936137 . G . PASS END=21936139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 21936613 . C . PASS END=21936615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 21936616 . G . PASS END=21936618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 21936619 . G . PASS END=21936626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 21936627 . C . PASS END=21936630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:22,0 chr1 21936631 . A . PASS END=21936631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 21936632 . G . PASS END=21936639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,808:0,66,255:26,0 chr1 21936640 . G . PASS END=21936754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1086:0,84,255:37,0 chr1 21936755 . C . PASS END=21936768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 21937945 . C . PASS END=21937946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 21937947 . G . PASS END=21937948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 21937949 . T . PASS END=21937949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 21937950 . G . PASS END=21937951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 21937952 . G . PASS END=21937953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 21937954 . G . PASS END=21937970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:36,0 chr1 21937971 . G . PASS END=21937971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 21937972 . C . PASS END=21938074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1305:0,93,255:40,0 chr1 21938209 . C . PASS END=21938309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,114,1721:0,114,255:40,0 chr1 21938519 . C . PASS END=21938550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:32,0 chr1 21938551 . T . PASS END=21938551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:31,0 chr1 21938552 . G . PASS END=21938589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1117:0,82,255:34,0 chr1 21938590 . T . PASS END=21938590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 21938591 . G . PASS END=21938598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 21938599 . A . PASS END=21938602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:29:0,77,1102:0,77,255:26,0 chr1 21939669 . C . PASS END=21939703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:43:0,96,1524:0,96,255:40,0 chr1 21939704 . T . PASS END=21939722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:38:0,96,1351:0,97,255:40,0 chr1 21940121 . C . PASS END=21940199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,99,1485:0,99,255:40,0 chr1 21940479 . C . PASS END=21940482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 21940483 . G . PASS END=21940483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 21940484 . C . PASS END=21940485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 21940486 . G . PASS END=21940486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 21940487 . C . PASS END=21940501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,740:0,66,255:24,0 chr1 21940502 . T . PASS END=21940502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 21940503 . T . PASS END=21940514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,884:0,62,255:25,0 chr1 21940515 . A . PASS END=21940515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21940516 . C . PASS END=21940516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 21940517 . A . PASS END=21940518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 21940519 . C . PASS END=21940541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1011:0,73,255:26,0 chr1 21940542 . T . PASS END=21940542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 21940543 . G . PASS END=21940558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 21940559 . C . PASS END=21940559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 21940560 . A . PASS END=21940562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 21940563 . G . PASS END=21940563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 21940564 . A . PASS END=21940567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 21940568 . G . PASS END=21940568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 21940569 . T . PASS END=21940571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 21940572 . T . PASS END=21940582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 21943799 . C . PASS END=21943803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 21943804 . C . PASS END=21943804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 21943805 . G . PASS END=21943810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:13,0 chr1 21943811 . G . PASS END=21943819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 21943820 . G A, 49.74 PASS DP=15;MQ=249.54;MQRankSum=2.257;ReadPosRankSum=-0.868;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:5,3,0:3,4,0:47:85,0,47,185,185,185:226,0,255:8,0:4.9738e+01,8.9566e-05,5.0000e+01,1.8451e+02,2.1928e+02,1.8752e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,2,1,6:5,3,3,4 chr1 21943821 . T . PASS END=21943821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 21943822 . A . PASS END=21943822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 21943823 . G . PASS END=21943835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:19,0 chr1 21943836 . G . PASS END=21943838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 21943839 . T . PASS END=21943841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 21943842 . C . PASS END=21943857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:24,0 chr1 21943858 . T . PASS END=21943859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:26,0 chr1 21943860 . G . PASS END=21943864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 21943865 . G . PASS END=21943867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 21943868 . C . PASS END=21943880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:29,0 chr1 21943881 . T . PASS END=21943883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 21943884 . G . PASS END=21943896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 21943897 . T . PASS END=21943898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1008:0,68,255:27,0 chr1 21943899 . G . PASS END=21943903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 21943904 . T . PASS END=21943904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:26,0 chr1 21943905 . T . PASS END=21943906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 21943907 . G . PASS END=21943912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 21943913 . G . PASS END=21943934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 21943935 . C . PASS END=21943946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr1 21943947 . A . PASS END=21943947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 21943948 . G . PASS END=21943948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 21943949 . C . PASS END=21943978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,629:0,40,255:19,0 chr1 21943979 . C . PASS END=21943984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 21944425 . A . PASS END=21944465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,134,255:40,0 chr1 21945518 . T . PASS END=21945565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1147:0,83,255:33,0 chr1 21946508 . C . PASS END=21946512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 21946513 . T . PASS END=21946513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:31,0 chr1 21946514 . C . PASS END=21946543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1185:0,92,255:37,0 chr1 21948832 . C . PASS END=21948835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 21948836 . C . PASS END=21948869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 21948870 . G . PASS END=21948896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr1 21948897 . G . PASS END=21948906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:3:5:0,3,45:0,15,164:1,0 chr1 21952797 . C . PASS END=21952806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr1 21952807 . A . PASS END=21952807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 21952808 . G . PASS END=21952813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:26,0 chr1 21952814 . G . PASS END=21952814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 21952815 . A . PASS END=21952815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 21952816 . G . PASS END=21952816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 21952817 . T . PASS END=21952826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,983:0,87,255:29,0 chr1 21952827 . A . PASS END=21952827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:28,0 chr1 21952828 . A . PASS END=21952839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 21952840 . C . PASS END=21952840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 21952841 . G . PASS END=21952843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 21952844 . A . PASS END=21952844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 21952845 . C . PASS END=21952846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 21952847 . G . PASS END=21952883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1166:0,86,255:34,0 chr1 21952884 . G A, 48.78 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=4.767;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:12,5,0:6,9,0:47:84,0,50,472,644,1116:255,0,255:18,0:4.8784e+01,7.9212e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,6,8:11,7,7,7 chr1 21952885 . C . PASS END=21952890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:31,0 chr1 21976254 . C . PASS END=21976289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:36,0 chr1 21978272 . C . PASS END=21978276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 21978277 . G . PASS END=21978277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:7,0 chr1 21978278 . T . PASS END=21978289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,258:0,24,255:8,0 chr1 21978290 . G . PASS END=21978291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 21978292 . G . PASS END=21978296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 21978297 . T . PASS END=21978314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,227:6,0 chr1 21978315 . T . PASS END=21978315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,255:3,0 chr1 22005910 . T . PASS END=22005932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,163,255:40,0 chr1 22007301 . C . PASS END=22007327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,255,255:40,0 chr1 22013684 . C . PASS END=22013732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,162,255:40,0 chr1 22016467 . C . PASS END=22016592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,120,1790:0,120,255:40,0 chr1 22021559 . C . PASS END=22021712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:36:0,81,1215:0,102,255:40,0 chr1 22021713 . C . PASS END=22021714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1035:0,92,255:23,0 chr1 22027991 . T . PASS END=22028095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:58:0,120,1800:0,142,255:40,0 chr1 22030005 . C . PASS END=22030075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,100,1360:0,100,255:40,0 chr1 22030076 . G . PASS END=22030104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:43:0,87,1305:0,99,255:40,0 chr1 22030105 . C . PASS END=22030111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:63:37:0,63,945:0,97,255:26,0 chr1 22030755 . T . PASS END=22030853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,3:75:99:47:0,120,1800:0,125,255:40,0 chr1 22030854 . T . PASS END=22030876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:87:65:0,87,1305:0,164,255:40,0 chr1 22030877 . A . PASS END=22030885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:69:57:0,69,1035:0,116,255:24,0 chr1 22032220 . A . PASS END=22032220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22032221 . G . PASS END=22032224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 22032225 . A . PASS END=22032225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 22032226 . G . PASS END=22032230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:24,0 chr1 22032231 . T . PASS END=22032231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 22032232 . T . PASS END=22032232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,800:0,72,255:24,0 chr1 22032233 . C . PASS END=22032233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 22032234 . T . PASS END=22032239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,854:0,72,255:25,0 chr1 22032240 . C . PASS END=22032240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 22032241 . A . PASS END=22032250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 22032251 . A . PASS END=22032256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:30,0 chr1 22032257 . A . PASS END=22032257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,883:0,73,255:28,0 chr1 22032258 . C . PASS END=22032330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:32:0,93,1274:0,96,255:40,0 chr1 22032363 . C . PASS END=22032369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,134,255:40,0 chr1 22032619 . C . PASS END=22032680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:74:0,120,1800:0,206,255:40,0 chr1 22032960 . C . PASS END=22033082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:58:0,120,1800:0,140,255:40,0 chr1 22033237 . C . PASS END=22033335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:69:0,120,1800:0,198,255:40,0 chr1 22033336 . T . PASS END=22033384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:75:0,120,1800:0,146,255:40,0 chr1 22033385 . G . LowGQ END=22033386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,9:75:0:72:0,0,1878:102,0,255:40,12 chr1 22033387 . A . PASS END=22033400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:94:66:0,94,1800:0,94,255:40,0 chr1 22041882 . C . PASS END=22041882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr1 22041883 . A G, 47.36 PASS DP=78;MQ=250.00;MQRankSum=7.471;ReadPosRankSum=1.295;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,32,0:0.410,0.000:78:26,15,0:20,17,0:46:82,0,50,1137,1588,2724:255,0,255:40,0:4.7358e+01,1.0147e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,21,17,15:27,19,18,14 chr1 22041884 . T . PASS END=22041920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:80:0,120,1800:0,202,255:40,0 chr1 22041921 . C . PASS END=22041950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,239,255:40,0 chr1 22047529 . C . PASS END=22047529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 22047530 . T . PASS END=22047530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:20,0 chr1 22047531 . T . PASS END=22047545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 22047546 . C . PASS END=22047546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 22047547 . C . PASS END=22047548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 22047549 . T . PASS END=22047549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 22047550 . T . PASS END=22047553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,803:0,72,255:24,0 chr1 22047554 . C . PASS END=22047554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 22047555 . T . PASS END=22047557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 22047558 . C . PASS END=22047559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 22047560 . G . PASS END=22047567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 22047568 . G . PASS END=22047584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1151:0,87,255:32,0 chr1 22047585 . T . PASS END=22047585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 22047586 . G . PASS END=22047604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1208:0,83,255:32,0 chr1 22047605 . A . PASS END=22047605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1023:0,63,255:28,0 chr1 22047606 . G . PASS END=22047611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1074:0,90,255:31,0 chr1 22047612 . T . PASS END=22047612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 22047613 . G . PASS END=22047616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 22047617 . C . PASS END=22047618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 22047619 . A . PASS END=22047619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22047620 . A . PASS END=22047659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,886:0,61,255:26,0 chr1 22048143 . C . PASS END=22048257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:42:0,99,1485:0,119,255:40,0 chr1 22050391 . C . PASS END=22050391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:34,0 chr1 22050392 . A . PASS END=22050392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr1 22050393 . G . PASS END=22050611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:35:0,89,1233:0,89,255:40,0 chr1 22050612 . A . PASS END=22050631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1219:0,88,255:34,0 chr1 22050632 . T . PASS END=22050632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:28,0 chr1 22050633 . T . PASS END=22050638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,88,255:29,0 chr1 22050639 . C . PASS END=22050642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 22050643 . G . PASS END=22050643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22050644 . T . PASS END=22050644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 22050645 . G . PASS END=22050647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 22050648 . A . PASS END=22050648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 22050649 . C A, 136.82 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,17,0:0,13,0:87:175,90,0,275,275,275:255,90,0:0,0:1.3682e+02,8.6816e+01,0.0000e+00,2.7159e+02,3.0636e+02,2.7460e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,5,25:0,0,16,14 chr1 22050650 . A . PASS END=22050655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1027:0,87,255:29,0 chr1 22055055 . T . PASS END=22055059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22055060 . G . PASS END=22055060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22055061 . A . PASS END=22055061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 22055062 . C . PASS END=22055196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1131:0,84,255:40,0 chr1 22055197 . A . PASS END=22055197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1317:0,75,255:33,0 chr1 22055198 . G . PASS END=22055212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1280:0,94,255:32,0 chr1 22056197 . C . PASS END=22056320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,99,1450:0,99,255:40,0 chr1 22056321 . T . PASS END=22056321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1412:0,46,255:31,0 chr1 22056322 . T . PASS END=22056325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,101,255:31,0 chr1 22059157 . T . PASS END=22059193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:95:54:0,95,1545:0,95,255:40,0 chr1 22062924 . A . PASS END=22062934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,939:0,67,255:26,0 chr1 22062935 . T . PASS END=22063083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,978:0,81,255:40,0 chr1 22063084 . G . PASS END=22063102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 22063103 . T . PASS END=22063111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:18,0 chr1 22063112 . G . PASS END=22063118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 22073560 . C . PASS END=22073642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:45:0,119,1637:0,119,255:40,0 chr1 22074631 . C . PASS END=22074645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,105,1528:0,105,255:40,0 chr1 22074646 . C . PASS END=22074646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:67:46:0,67,1579:0,67,255:40,0 chr1 22074647 . G . PASS END=22074764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:39:0,81,1376:0,81,255:40,0 chr1 22078000 . C . PASS END=22078108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:53:0,120,1800:0,141,255:40,0 chr1 22079020 . A . PASS END=22079144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:47:0,120,1800:0,131,255:40,0 chr1 22079485 . C . PASS END=22079487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 22079488 . C . PASS END=22079490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 22079491 . T . PASS END=22079492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 22079493 . G . PASS END=22079503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1094:0,90,255:37,0 chr1 22079504 . A . PASS END=22079612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:37:0,99,1426:0,101,255:40,0 chr1 22083039 . C . PASS END=22083039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1443:0,79,255:40,0 chr1 22083040 . T . PASS END=22083042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,110,1511:0,110,255:40,0 chr1 22083043 . T . PASS END=22083043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1405:0,71,255:40,0 chr1 22083044 . T . PASS END=22083047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:41:0,92,1309:0,92,255:40,0 chr1 22083048 . C . PASS END=22083048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1359:0,62,255:38,0 chr1 22083049 . T . PASS END=22083052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,113,1558:0,113,255:40,0 chr1 22083053 . A . PASS END=22083197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:82:43:0,82,1295:0,82,255:40,0 chr1 22084156 . C . PASS END=22084276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:42:0,93,1395:0,120,255:40,0 chr1 22109317 . C . PASS END=22109320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22109321 . A . PASS END=22109322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:18,1 chr1 22109323 . A . PASS END=22109331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 22109332 . A . PASS END=22109332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 22109333 . T . PASS END=22109340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 22109341 . T . PASS END=22109341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 22109342 . C . PASS END=22109369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,799:0,63,255:23,0 chr1 22109370 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.128;ReadPosRankSum=1.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:9,7,0:3,5,0:47:85,0,47,185,185,185:255,0,255:11,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,6,6,6:7,5,7,5 chr1 22109371 . T . PASS END=22109371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 22109372 . G . PASS END=22109395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,914:0,72,255:24,0 chr1 22109396 . G . PASS END=22109396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 22109397 . C . PASS END=22109407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,908:0,72,255:24,0 chr1 22109408 . C . PASS END=22109408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 22109409 . C . PASS END=22109409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 22109410 . C . PASS END=22109410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 22109411 . A . PASS END=22109411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:21,0 chr1 22109412 . G . PASS END=22109420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22109421 . C . PASS END=22109443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 22109444 . G . PASS END=22109448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:18:0,39,585:0,40,255:13,0 chr1 22109449 . A . PASS END=22109450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:18:0,24,360:0,54,255:8,0 chr1 22138945 . A . PASS END=22138945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 22138946 . T . PASS END=22138946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 22138947 . G . PASS END=22138947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 22138948 . G . PASS END=22138948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 22138949 . A . PASS END=22138958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1073:0,87,255:31,0 chr1 22138959 . T . PASS END=22138959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 22138960 . C . PASS END=22138995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1111:0,80,255:32,0 chr1 22138996 . G . PASS END=22138998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:32:0,68,1170:0,68,255:28,0 chr1 22138999 . G . PASS END=22139003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 22139004 . C . PASS END=22139008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 22139009 . C . PASS END=22139019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:27,0 chr1 22139020 . T . PASS END=22139029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 22140891 . C . PASS END=22140896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 22140897 . T . LowGQ END=22140897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,230:6,0,236:6,0 chr1 22140898 . G . PASS END=22140902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 22140903 . A . PASS END=22140903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:6,0 chr1 22140904 . A . PASS END=22140911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,304:0,24,255:9,0 chr1 22140912 . G . PASS END=22140921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 22140922 . G . PASS END=22140922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 22140923 . C . PASS END=22140932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 22140933 . G . PASS END=22140973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:18,0 chr1 22140974 . T . PASS END=22140974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,599:0,26,255:17,0 chr1 22140975 . T . PASS END=22141006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 22141007 . G . PASS END=22141007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 22141008 . T . PASS END=22141012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 22141013 . G . PASS END=22141013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22141014 . C . PASS END=22141015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 22141016 . G . PASS END=22141016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 22141017 . C . PASS END=22141025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 22141026 . G . PASS END=22141026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 22141027 . C . PASS END=22141040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 22141041 . T . PASS END=22141041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 22141042 . C . PASS END=22141061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:18,0 chr1 22141062 . T . PASS END=22141062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,551:0,13,255:16,0 chr1 22141063 . C . PASS END=22141100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,615:0,40,255:19,0 chr1 22141101 . C . PASS END=22141101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 22141102 . C . PASS END=22141102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22141103 . T . PASS END=22141108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,490:0,31,255:13,0 chr1 22141109 . G . PASS END=22141114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 22141115 . G . PASS END=22141115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 22141116 . C . PASS END=22141118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,527:0,45,255:15,0 chr1 22141119 . A . PASS END=22141119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,425:0,12,255:13,0 chr1 22141120 . C . PASS END=22141120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 22141121 . C . PASS END=22141121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 22141122 . C . PASS END=22141123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr1 22141124 . T . PASS END=22141124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 22141125 . G . PASS END=22141139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,523:0,48,255:17,0 chr1 22141140 . A . PASS END=22141140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 22141141 . C . PASS END=22141141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22141142 . C . PASS END=22141142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 22141143 . T . PASS END=22141143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,433:0,1,255:13,0 chr1 22141144 . G . PASS END=22141144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22141145 . C . PASS END=22141146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,470:0,34,255:15,0 chr1 22141147 . G . PASS END=22141148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22141149 . T . PASS END=22141149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr1 22141150 . C . PASS END=22141151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:47:16:0,47,456:0,47,255:16,0 chr1 22141152 . A . PASS END=22141152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:14,0 chr1 22141153 . C . PASS END=22141164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 22141165 . G . PASS END=22141165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:15,0 chr1 22141166 . G . PASS END=22141168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22141169 . G . PASS END=22141169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 22141170 . C . PASS END=22141170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 22141171 . G . LowGQ END=22141171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,429:11,0,255:15,0 chr1 22141172 . C . PASS END=22141173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 22141174 . C . PASS END=22141174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 22141175 . C . PASS END=22141181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:18,0 chr1 22141182 . T . PASS END=22141183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 22141184 . G . PASS END=22141197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 22141198 . C . PASS END=22141198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:13,0 chr1 22141199 . G . PASS END=22141200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:15,0 chr1 22141201 . C . PASS END=22141201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,631:0,32,255:15,0 chr1 22141202 . C . PASS END=22141205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 22141206 . A C, 42.85 PASS DP=20;MQ=249.85;MQRankSum=3.423;ReadPosRankSum=1.608;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,6,0:0.300,0.000:20:6,2,0:8,4,0:42:78,0,50,215,497,711:172,0,255:10,0:4.2855e+01,2.4670e-04,5.3000e+01,2.1456e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,3,3:8,6,3,3 chr1 22141207 . C . PASS END=22141227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,623:0,54,255:18,0 chr1 22141228 . C . PASS END=22141228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 22141229 . T . PASS END=22141234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 22141235 . C . PASS END=22141235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 22141236 . C . PASS END=22141243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 22141244 . G . PASS END=22141247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 22141248 . T . PASS END=22141248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 22141249 . G . PASS END=22141252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 22141253 . C . PASS END=22141273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 22141274 . C . PASS END=22141307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 22141308 . T . LowGQ END=22141308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr1 22141309 . C . PASS END=22141311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 22141312 . T . PASS END=22141316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 22142436 . G . PASS END=22142439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 22142440 . T . PASS END=22142441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 22142442 . G . PASS END=22142447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:30,0 chr1 22142448 . C . PASS END=22142448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:28,0 chr1 22142449 . C . PASS END=22142451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1105:0,90,255:31,0 chr1 22142452 . C . PASS END=22142452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 22142453 . T . PASS END=22142465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,93,255:31,0 chr1 22142466 . A . PASS END=22142466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 22142467 . T . PASS END=22142530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1096:0,90,255:32,0 chr1 22142531 . A . PASS END=22142542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 22142543 . T . PASS END=22142543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 22142544 . C . PASS END=22142545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 22142546 . T . PASS END=22142546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 22142547 . G . PASS END=22142564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22142565 . G . PASS END=22142567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr1 22147943 . G . PASS END=22147958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,845:0,66,255:26,0 chr1 22147959 . C . PASS END=22148014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,994:0,81,255:32,0 chr1 22148015 . C . PASS END=22148015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:30,0 chr1 22148016 . T . PASS END=22148023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1127:0,93,255:33,0 chr1 22148024 . C . PASS END=22148024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:31,0 chr1 22148025 . T . PASS END=22148103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1271:0,81,255:38,0 chr1 22148104 . G . PASS END=22148104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr1 22148105 . G . PASS END=22148127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:35,0 chr1 22148128 . C . PASS END=22148131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 22148132 . C . PASS END=22148132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 22148133 . A . PASS END=22148134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22148135 . A . PASS END=22148135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:25,0 chr1 22148136 . A . PASS END=22148160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,931:0,64,255:26,0 chr1 22148695 . G . PASS END=22148708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1349:0,105,255:35,0 chr1 22148741 . G . PASS END=22148741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 22148874 . G . PASS END=22148874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 22148905 . C . PASS END=22148905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1084:0,55,255:28,0 chr1 22148985 . G . PASS END=22148985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 22148992 . C . PASS END=22148992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 22149128 . G . PASS END=22149128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 22149159 . C . PASS END=22149159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22149210 . T . PASS END=22149210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 22149259 . T . PASS END=22149259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr1 22149280 . G . PASS END=22149280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 22149410 . G . PASS END=22149410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 22149470 . G . PASS END=22149470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 22149505 . C . PASS END=22149505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 22149591 . C . PASS END=22149591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 22149601 . C . PASS END=22149601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22149706 . C . PASS END=22149706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 22149711 . C . PASS END=22149711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 22149764 . C . PASS END=22149764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 22149770 . G . PASS END=22149770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 22149789 . C . PASS END=22149789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 22149809 . C . PASS END=22149815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,729:0,47,255:19,0 chr1 22149816 . G . PASS END=22149820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22149821 . G . PASS END=22149834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 22149835 . C . PASS END=22149858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:26,0 chr1 22149859 . G . PASS END=22149862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 22149863 . C . PASS END=22149863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 22149864 . A . PASS END=22149868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 22149869 . C . PASS END=22149869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 22149870 . T . PASS END=22149882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 22149883 . C . PASS END=22149897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,923:0,75,255:25,0 chr1 22149898 . A . PASS END=22149899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 22149900 . T . PASS END=22149900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 22149901 . G . PASS END=22149911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,65,255:23,0 chr1 22149912 . T . PASS END=22149912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr1 22149913 . T . PASS END=22149914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22149915 . T . PASS END=22149915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:19,0 chr1 22149916 . T . PASS END=22149920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 22149921 . C . PASS END=22149923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,825:0,58,255:20,0 chr1 22149924 . C . PASS END=22149934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:22,0 chr1 22149935 . T C, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=0.495;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:3,3,0:7,9,0:48:85,0,50,392,358,750:255,0,255:10,0:5.0000e+01,6.6786e-05,5.2680e+01,3.9231e+02,3.9237e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,7,5:8,2,8,4 chr1 22149936 . G . PASS END=22149938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22149939 . G . PASS END=22149942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr1 22149943 . A . PASS END=22149944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 22149945 . C . PASS END=22149966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:19,0 chr1 22149967 . C . PASS END=22149972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 22149973 . G . PASS END=22149978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 22149979 . C . PASS END=22149980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22149981 . C . PASS END=22149981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22149986 . C . PASS END=22149986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22150109 . C . PASS END=22150109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22150110 . G . PASS END=22150120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr1 22150121 . T . PASS END=22150121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr1 22150122 . G . PASS END=22150125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:31,0 chr1 22150126 . T . PASS END=22150126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:30,0 chr1 22150127 . T . PASS END=22150130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 22150131 . G . PASS END=22150131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 22150132 . T . PASS END=22150136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:32,0 chr1 22150137 . T . PASS END=22150137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:32,0 chr1 22150138 . G . PASS END=22150188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1141:0,80,255:33,0 chr1 22150189 . T . PASS END=22150207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:24:0,62,945:0,62,255:26,0 chr1 22150208 . C . PASS END=22150208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 22150209 . C . PASS END=22150212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 22150614 . C . PASS END=22150620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1027:0,84,255:30,0 chr1 22150621 . C . PASS END=22150621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 22150622 . T . PASS END=22150637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:31,0 chr1 22150638 . T . PASS END=22150638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 22150639 . C . PASS END=22150641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1170:0,93,255:31,0 chr1 22150642 . C . PASS END=22150642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr1 22150643 . G . PASS END=22150645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 22150646 . A . PASS END=22150646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 22150647 . T . PASS END=22150687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1111:0,82,255:32,0 chr1 22150688 . C . PASS END=22150689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1158:0,61,255:29,0 chr1 22150690 . G . PASS END=22150697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:32,0 chr1 22150799 . C . PASS END=22150827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1062:0,84,255:29,0 chr1 22150828 . G . PASS END=22150869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,736:0,61,255:26,0 chr1 22150878 . G . PASS END=22150878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 22151029 . C . PASS END=22151031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22151032 . C . PASS END=22151047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:19,0 chr1 22151048 . G . PASS END=22151055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 22151056 . T . PASS END=22151056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,668:0,24,255:20,0 chr1 22151057 . G . PASS END=22151057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 22151058 . G . PASS END=22151058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 22151059 . C . PASS END=22151059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 22151060 . T . PASS END=22151060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 22151061 . G . PASS END=22151075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 22151076 . T . PASS END=22151076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 22151077 . C . PASS END=22151079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 22151080 . G . PASS END=22151080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 22151081 . C . PASS END=22151085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 22151086 . T . PASS END=22151086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 22151087 . G . PASS END=22151088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr1 22151089 . T . PASS END=22151089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,61,255:18,0 chr1 22151090 . C . PASS END=22151102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:21,0 chr1 22151103 . G . PASS END=22151103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr1 22151104 . G . PASS END=22151108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr1 22151197 . C . PASS END=22151207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:26,0 chr1 22151208 . G . PASS END=22151208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22151209 . A . PASS END=22151209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:26,0 chr1 22151210 . C . PASS END=22151227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1100:0,84,255:29,0 chr1 22151228 . G . PASS END=22151235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:26,0 chr1 22151236 . T . PASS END=22151237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22151238 . A . PASS END=22151238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 22151239 . T . PASS END=22151245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 22151246 . A . PASS END=22151247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 22151248 . T . PASS END=22151252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 22151253 . T . PASS END=22151269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr1 22151270 . C . PASS END=22151270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 22151271 . A . PASS END=22151272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22154356 . C . PASS END=22154412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1123:0,80,255:31,0 chr1 22154427 . A . PASS END=22154427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22154523 . C . PASS END=22154527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr1 22154528 . T . PASS END=22154528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 22154529 . G . PASS END=22154579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1194:0,83,255:37,0 chr1 22154580 . A . PASS END=22154580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:36,0 chr1 22154581 . G . PASS END=22154621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1168:0,91,255:37,0 chr1 22154622 . T . PASS END=22154622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1183:0,69,255:33,0 chr1 22154623 . C . PASS END=22154634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1186:0,86,255:34,0 chr1 22154635 . A . PASS END=22154645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,1015:0,63,255:26,0 chr1 22154738 . G . PASS END=22154738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22154748 . C . PASS END=22154787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,554:0,51,255:18,0 chr1 22154788 . G . PASS END=22154790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22154791 . A . PASS END=22154794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 22154795 . G . PASS END=22154801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 22154802 . A . PASS END=22154809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 22154810 . C . PASS END=22154811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22154812 . A . PASS END=22154860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:18,0 chr1 22154861 . A . PASS END=22154861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 22154862 . T . PASS END=22154863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 22154864 . C . PASS END=22154864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 22154865 . C . PASS END=22154869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22154870 . C . PASS END=22154890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr1 22154891 . A . PASS END=22154916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,455:0,45,255:16,0 chr1 22154917 . C . PASS END=22154919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22155328 . C . PASS END=22155345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,598:0,40,255:19,0 chr1 22155346 . G . PASS END=22155351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 22155352 . A . PASS END=22155375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr1 22155376 . C . PASS END=22155376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22155377 . A . PASS END=22155377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 22155378 . G . PASS END=22155389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 22155390 . G . PASS END=22155391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 22155392 . T . PASS END=22155393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 22155394 . C . PASS END=22155396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 22155397 . A . PASS END=22155397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 22155398 . C . PASS END=22155409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 22155410 . A . PASS END=22155430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,714:0,41,255:19,0 chr1 22155431 . C . PASS END=22155453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,861:0,63,255:23,0 chr1 22155454 . G . PASS END=22155454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22155455 . C . PASS END=22155458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 22155459 . G . PASS END=22155468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1039:0,80,255:27,0 chr1 22155469 . T . PASS END=22155489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr1 22155490 . G . PASS END=22155504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 22155505 . A . PASS END=22155505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,842:0,50,255:25,0 chr1 22155506 . C . PASS END=22155524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:26,0 chr1 22155525 . G . PASS END=22155525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr1 22155526 . C . PASS END=22155535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,62,255:23,0 chr1 22155536 . A . PASS END=22155536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 22155537 . G . PASS END=22155541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 22155542 . A . PASS END=22155561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 22155562 . A . PASS END=22155565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 22155566 . G . PASS END=22155566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 22155567 . C . PASS END=22155567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 22155568 . C . PASS END=22155572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 22155876 . C . PASS END=22155883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr1 22155884 . A . PASS END=22155884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 22155885 . A . PASS END=22155906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,643:0,41,255:19,0 chr1 22155907 . G . PASS END=22155928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:24,0 chr1 22155929 . A . PASS END=22155929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 22155930 . C . PASS END=22155930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 22155931 . G . PASS END=22155931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 22155932 . A . PASS END=22155967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,811:0,62,255:26,0 chr1 22155968 . A . PASS END=22155968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 22155969 . G . PASS END=22156014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 22156015 . T . PASS END=22156015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 22156016 . A . PASS END=22156060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 22156061 . C . PASS END=22156082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:18,0 chr1 22156083 . T . PASS END=22156097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 22156486 . C . PASS END=22156490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 22156491 . T . PASS END=22156491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 22156492 . C . PASS END=22156500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 22156501 . A . PASS END=22156508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 22156509 . C . PASS END=22156528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr1 22156529 . G . PASS END=22156554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,582:0,45,255:18,0 chr1 22156555 . T . PASS END=22156555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 22156556 . C . PASS END=22156559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22156560 . C . PASS END=22156561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,596:0,35,255:16,0 chr1 22156562 . G . PASS END=22156582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,643:0,48,255:17,0 chr1 22156583 . C . PASS END=22156584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:14,0 chr1 22156591 . G . PASS END=22156591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22157464 . G . PASS END=22157464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 22157474 . C . PASS END=22157481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,729:0,57,255:19,0 chr1 22157482 . G . PASS END=22157485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 22157486 . T . PASS END=22157486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 22157487 . G . PASS END=22157497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 22157498 . G . PASS END=22157522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,670:0,57,255:19,0 chr1 22157523 . A . PASS END=22157527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 22157528 . G . PASS END=22157528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 22157529 . C . PASS END=22157529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22157530 . T . PASS END=22157530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 22157531 . G . PASS END=22157532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22157533 . G . PASS END=22157537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22157538 . C . PASS END=22157543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 22157544 . C . PASS END=22157548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 22157549 . C . PASS END=22157550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22157551 . G . PASS END=22157551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 22157552 . C . PASS END=22157553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22157554 . G . PASS END=22157578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,746:0,52,255:19,0 chr1 22157579 . C . PASS END=22157579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 22157580 . C . PASS END=22157582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22157583 . T . PASS END=22157583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,596:0,23,255:16,0 chr1 22157708 . C . PASS END=22157726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1255:0,89,255:40,0 chr1 22157727 . C . PASS END=22157817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,102,1523:0,112,255:40,0 chr1 22157956 . C . PASS END=22157982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:33,0 chr1 22157983 . T . PASS END=22157985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1257:0,66,255:33,1 chr1 22157986 . G . PASS END=22158047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:30:0,84,1260:0,89,255:36,0 chr1 22158048 . A . PASS END=22158048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 22158049 . A . PASS END=22158055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 22158068 . G . PASS END=22158068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 22158145 . C . PASS END=22158149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 22158150 . A . PASS END=22158150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22158151 . G . PASS END=22158151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 22158152 . G . PASS END=22158158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 22158159 . T . PASS END=22158160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22158161 . A . PASS END=22158162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22158163 . C . PASS END=22158164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22158165 . G . PASS END=22158194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,837:0,62,255:26,0 chr1 22158195 . G . PASS END=22158221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr1 22158222 . T . PASS END=22158222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr1 22158223 . G . PASS END=22158235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 22158236 . A . PASS END=22158277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 22158278 . C . PASS END=22158278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 22158279 . C . PASS END=22158284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22158285 . C . PASS END=22158285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 22158286 . G . PASS END=22158286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22158287 . A . PASS END=22158289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22158296 . C . PASS END=22158296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 22158988 . C . PASS END=22159023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1205:0,83,255:37,0 chr1 22159024 . A . PASS END=22159024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:35,0 chr1 22159025 . T . PASS END=22159099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1216:0,83,255:40,0 chr1 22159368 . C . PASS END=22159378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 22159379 . A . PASS END=22159379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:25,0 chr1 22159380 . G . PASS END=22159385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr1 22159761 . C . PASS END=22159762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,797:0,69,255:23,0 chr1 22159763 . T . PASS END=22159763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 22159764 . C . PASS END=22159767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 22159768 . T . PASS END=22159768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 22159769 . G . PASS END=22159787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:25,0 chr1 22159788 . T . PASS END=22159788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 22159789 . C . PASS END=22159789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 22159790 . T . PASS END=22159790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 22159791 . T . PASS END=22159802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,893:0,75,255:26,0 chr1 22159803 . T . PASS END=22159824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:31,0 chr1 22159825 . G . PASS END=22159825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:29,0 chr1 22159826 . G . PASS END=22159831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 22159832 . G . PASS END=22159832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 22159833 . G . PASS END=22159837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 22159838 . A . PASS END=22159877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,931:0,64,255:26,0 chr1 22159960 . C . PASS END=22159968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 22159969 . G . PASS END=22159969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 22159970 . C . PASS END=22159974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 22159975 . G . PASS END=22159975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 22159976 . G . PASS END=22159977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22159978 . C . PASS END=22159981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22159982 . G . PASS END=22159985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22159986 . T . PASS END=22159991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 22159992 . T . PASS END=22159992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:16,0 chr1 22159993 . T . PASS END=22159996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 22159997 . C . PASS END=22160012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,41,255:13,0 chr1 22160013 . G . PASS END=22160013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22160014 . T . PASS END=22160017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 22160018 . G . PASS END=22160018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 22160019 . A . PASS END=22160019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 22160020 . C . PASS END=22160027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:18,0 chr1 22160028 . C . PASS END=22160028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 22160029 . C . PASS END=22160077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,527:0,45,255:18,0 chr1 22160078 . G . PASS END=22160078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 22160079 . C . PASS END=22160107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 22160122 . G . PASS END=22160122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 22160309 . C . PASS END=22160321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 22160322 . A . PASS END=22160322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 22160323 . T . PASS END=22160333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 22160334 . G . PASS END=22160334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 22160335 . G . PASS END=22160343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr1 22160344 . A . PASS END=22160348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 22160349 . A . PASS END=22160349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 22160350 . T . PASS END=22160353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 22160354 . G . PASS END=22160354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 22160355 . G . PASS END=22160368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,560:0,47,255:16,0 chr1 22160369 . A . PASS END=22160371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 22160372 . A . PASS END=22160376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 22160377 . C . PASS END=22160381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:14:0,34,551:0,34,255:13,0 chr1 22160382 . A . PASS END=22160383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22160384 . A . PASS END=22160385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 22160386 . G . PASS END=22160400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 22160401 . T . PASS END=22160418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 22161172 . C . PASS END=22161193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 22161194 . G . PASS END=22161197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 22161198 . T . PASS END=22161198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 22161199 . G . PASS END=22161225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 22161226 . T . PASS END=22161226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 22161227 . G . PASS END=22161227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22161228 . C . PASS END=22161228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 22161229 . A . PASS END=22161234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 22161235 . A . PASS END=22161235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 22161236 . C . PASS END=22161285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1064:0,84,255:31,0 chr1 22161286 . T . PASS END=22161300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,77,255:26,0 chr1 22161301 . G . PASS END=22161301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:23,0 chr1 22161302 . C . PASS END=22161318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,67,255:26,0 chr1 22161319 . C . PASS END=22161324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 22161325 . T . PASS END=22161325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22161326 . C . PASS END=22161328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22161329 . T . PASS END=22161334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1069:0,71,255:26,0 chr1 22161335 . C . PASS END=22161335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22161336 . T . PASS END=22161390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,842:0,64,255:26,0 chr1 22161391 . C . PASS END=22161425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 22161426 . A . PASS END=22161426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 22161427 . C . PASS END=22161428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 22161429 . G . PASS END=22161438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22161985 . T . PASS END=22162065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1218:0,86,255:39,0 chr1 22162066 . T . PASS END=22162066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:32,0 chr1 22162067 . C . PASS END=22162086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1260:0,96,255:35,0 chr1 22162087 . G . PASS END=22162095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:26,0 chr1 22162096 . A . PASS END=22162119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:17:0,44,675:0,44,255:19,0 chr1 22162120 . A . PASS END=22162120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr1 22162121 . G . PASS END=22162128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22162129 . T . PASS END=22162130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 22163282 . C . PASS END=22163282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 22163295 . C . PASS END=22163318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 22163319 . T . PASS END=22163319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 22163320 . G . PASS END=22163331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:12,0 chr1 22163332 . G . PASS END=22163332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 22163333 . C . PASS END=22163334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 22163335 . G . PASS END=22163335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 22163336 . A . PASS END=22163349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 22163350 . A . PASS END=22163350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 22163351 . C . PASS END=22163353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 22163354 . A . PASS END=22163354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 22163355 . C . PASS END=22163396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr1 22163397 . T . PASS END=22163397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 22163398 . C . PASS END=22163405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 22163406 . G . PASS END=22163417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr1 22163418 . T . PASS END=22163418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 22163419 . T . PASS END=22163429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,468:0,45,255:16,0 chr1 22163430 . T . PASS END=22163430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 22163431 . G . PASS END=22163432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 22163433 . G . PASS END=22163433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 22163434 . G . PASS END=22163434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 22163435 . C . PASS END=22163435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 22163436 . G . PASS END=22163438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 22163439 . A . PASS END=22163439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 22163440 . C . PASS END=22163445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 22163446 . C . PASS END=22163446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 22163447 . G . PASS END=22163458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 22163459 . C . PASS END=22163459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 22163460 . C . PASS END=22163465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 22163466 . G . PASS END=22163470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22163471 . G . PASS END=22163473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22163474 . G . PASS END=22163474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 22163475 . G . PASS END=22163489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 22163490 . C . PASS END=22163490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 22163491 . C . PASS END=22163491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 22163492 . G . PASS END=22163499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:12,0 chr1 22165318 . C . PASS END=22165346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,350:0,33,255:12,0 chr1 22165347 . G . PASS END=22165347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 22165348 . C . PASS END=22165359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 22165360 . T . PASS END=22165360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 22165361 . G . PASS END=22165361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 22165362 . T . PASS END=22165371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,360:0,20,255:9,0 chr1 22165372 . G . PASS END=22165372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 22165373 . G . PASS END=22165373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 22165374 . C . PASS END=22165375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 22165376 . G . PASS END=22165393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:13,0 chr1 22165394 . C . PASS END=22165396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22165397 . A . PASS END=22165397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22165398 . G . PASS END=22165414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr1 22165415 . G . PASS END=22165443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 22165444 . T . PASS END=22165444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22165445 . C . PASS END=22165462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:23,0 chr1 22165463 . C . PASS END=22165463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 22165464 . A . PASS END=22165494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,795:0,66,255:23,0 chr1 22165495 . T . PASS END=22165495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 22165496 . C . PASS END=22165532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 22165533 . G . PASS END=22165540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 22165541 . C . PASS END=22165541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 22165542 . G . PASS END=22165558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 22165559 . C . PASS END=22165569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 22165570 . A . PASS END=22165570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 22165571 . T . PASS END=22165578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 22165582 . A . PASS END=22165582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 22165585 . G . PASS END=22165585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 22165864 . T . PASS END=22165868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 22165869 . A . PASS END=22165875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 22165876 . G . PASS END=22165876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 22165877 . G . PASS END=22165877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 22165878 . A . PASS END=22165888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 22165889 . C . PASS END=22165890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 22165891 . C . PASS END=22165891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 22165892 . A . PASS END=22165892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 22165893 . G . PASS END=22165893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 22165894 . C . PASS END=22165929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:19,0 chr1 22165930 . G . PASS END=22165930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 22165931 . G . PASS END=22165931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:22,0 chr1 22165932 . C . PASS END=22165932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 22165933 . C . PASS END=22165933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 22165934 . C . PASS END=22165934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 22165935 . G . PASS END=22165935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 22165936 . A . PASS END=22165937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 22165938 . T . PASS END=22165938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 22165939 . C . PASS END=22165944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22165945 . G . PASS END=22165946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22165947 . G . PASS END=22165950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 22165951 . C . PASS END=22165959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 22165960 . T . PASS END=22165960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 22165961 . G . PASS END=22166028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1105:0,80,255:33,0 chr1 22166029 . T . PASS END=22166043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 22166053 . C . PASS END=22166053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22166315 . C . PASS END=22166319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr1 22166320 . G . PASS END=22166331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 22166332 . A . PASS END=22166332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 22166333 . A . PASS END=22166408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,63,255:24,0 chr1 22166409 . G . PASS END=22166409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 22166410 . C . PASS END=22166410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr1 22166411 . C . PASS END=22166412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 22166413 . G . PASS END=22166432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr1 22166433 . C . PASS END=22166501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,590:0,44,255:19,0 chr1 22166502 . T . PASS END=22166502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 22166503 . G . PASS END=22166510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22167594 . C . PASS END=22167614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:17,0 chr1 22167615 . C . PASS END=22167615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 22167616 . A . PASS END=22167628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 22167629 . T . PASS END=22167642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 22167643 . T . PASS END=22167643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,577:0,43,255:19,0 chr1 22167644 . T . PASS END=22167647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22167648 . A . PASS END=22167649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22167650 . G . PASS END=22167657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 22167658 . C . PASS END=22167658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 22167659 . T . PASS END=22167659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22167660 . G . PASS END=22167665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22167666 . G . PASS END=22167671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 22167672 . A . PASS END=22167673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22167674 . G . PASS END=22167676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22167677 . C . PASS END=22167691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 22167692 . C . PASS END=22167694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 22167695 . C . PASS END=22167700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22167701 . T . PASS END=22167724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:23,0 chr1 22167725 . T . PASS END=22167725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 22167726 . T . PASS END=22167739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 22167740 . A . PASS END=22167764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:20,0 chr1 22167765 . C . PASS END=22167777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:14:0,30,450:0,41,255:13,0 chr1 22167778 . C . PASS END=22167778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 22168032 . C . PASS END=22168052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr1 22168053 . C . PASS END=22168063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 22168064 . A . PASS END=22168067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22168068 . C . PASS END=22168068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 22168069 . G . PASS END=22168100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,829:0,63,255:22,0 chr1 22168101 . C . PASS END=22168101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22168102 . G . PASS END=22168108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 22168109 . C . PASS END=22168141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 22168142 . C . PASS END=22168153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,35,255:13,0 chr1 22168154 . A . PASS END=22168157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:12:0,26,405:0,26,255:9,0 chr1 22168158 . G . LowGQ END=22168158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 22168159 . G . PASS END=22168163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 22168164 . T . PASS END=22168166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 22168495 . C . PASS END=22168496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,588:0,48,255:16,0 chr1 22168497 . T . PASS END=22168497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 22168498 . C . PASS END=22168504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 22168505 . C . PASS END=22168505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 22168506 . T . PASS END=22168531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,568:0,51,255:19,0 chr1 22168532 . G . PASS END=22168540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 22168541 . T . PASS END=22168541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22168542 . G . PASS END=22168579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,764:0,66,255:23,0 chr1 22168580 . G . PASS END=22168592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 22168593 . G . PASS END=22168593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22168594 . T . PASS END=22168594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 22168595 . G . PASS END=22168604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 22168605 . G . PASS END=22168627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,765:0,50,255:19,0 chr1 22168628 . C . PASS END=22168631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22168632 . A . PASS END=22168632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 22168633 . G . PASS END=22168635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22168732 . G . PASS END=22168775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1153:0,80,255:34,0 chr1 22168776 . G . PASS END=22168776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr1 22168777 . C . PASS END=22168862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1141:0,83,255:35,0 chr1 22168863 . G . PASS END=22168873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,74,255:26,0 chr1 22169256 . C . PASS END=22169256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22169263 . C . PASS END=22169266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 22169267 . T . PASS END=22169267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 22169268 . G . PASS END=22169278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 22169279 . A . PASS END=22169279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 22169280 . G . PASS END=22169304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 22169305 . G . PASS END=22169305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 22169306 . A . PASS END=22169329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:19,0 chr1 22169330 . A . PASS END=22169330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:17,0 chr1 22169331 . C . PASS END=22169342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr1 22169343 . G . PASS END=22169343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22169344 . A . PASS END=22169345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,751:0,47,255:21,0 chr1 22169346 . C . PASS END=22169349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 22169350 . A . PASS END=22169350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:21,0 chr1 22169351 . G . PASS END=22169370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 22169371 . T . PASS END=22169389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,49,255:19,0 chr1 22169390 . T . PASS END=22169390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:16,0 chr1 22169391 . A . PASS END=22169403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:17,0 chr1 22169404 . C . PASS END=22169414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:13,0 chr1 22169427 . G . PASS END=22169427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 22169790 . C . PASS END=22169791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 22169792 . G . PASS END=22169806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr1 22169807 . C . PASS END=22169828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:26,0 chr1 22169829 . G . PASS END=22169853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:29,0 chr1 22169854 . G . PASS END=22169931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:26,0 chr1 22170632 . C . PASS END=22170632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 22170641 . C . PASS END=22170649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr1 22170650 . G . PASS END=22170652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 22170653 . A . PASS END=22170655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 22170656 . G . PASS END=22170699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 22170700 . G . PASS END=22170746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 22170747 . C . PASS END=22170749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22170750 . G . PASS END=22170764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:21,0 chr1 22170765 . A . PASS END=22170781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 22170782 . T . PASS END=22170783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr1 22170784 . C . PASS END=22170784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:14,0 chr1 22170785 . A . PASS END=22170786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr1 22170787 . C . PASS END=22170787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 22170788 . T . PASS END=22170788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr1 22170789 . G . PASS END=22170789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 22170790 . G . PASS END=22170792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 22172597 . T . PASS END=22172597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 22172601 . C . PASS END=22172609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 22172610 . G . PASS END=22172621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 22172622 . A . PASS END=22172622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 22172623 . G . PASS END=22172649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,390:0,36,255:13,0 chr1 22172650 . T . PASS END=22172650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 22172651 . G . PASS END=22172671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,390:0,36,255:12,0 chr1 22172672 . C . LowGQ END=22172672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr1 22172673 . T . PASS END=22172674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 22172675 . C . PASS END=22172675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 22172676 . C . PASS END=22172680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 22172681 . A . PASS END=22172716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:16,0 chr1 22172717 . A . PASS END=22172717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 22172718 . C . PASS END=22172724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 22172725 . C . PASS END=22172725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 22172726 . A . PASS END=22172734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 22172735 . C . PASS END=22172735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 22172736 . G . PASS END=22172738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 22172739 . A . PASS END=22172739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 22172740 . G . PASS END=22172740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 22172741 . C . PASS END=22172741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 22172742 . C . PASS END=22172748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 22172940 . C . PASS END=22172941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 22172942 . T . PASS END=22172942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 22172943 . G . PASS END=22172963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 22172964 . C . PASS END=22172985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 22172986 . C . PASS END=22172990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 22172991 . C . PASS END=22173004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 22173005 . G . PASS END=22173021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 22173022 . A . PASS END=22173022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 22173023 . T . PASS END=22173042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 22173043 . C . PASS END=22173047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22173048 . G . PASS END=22173062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 22173063 . C . PASS END=22173090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 22173091 . G . PASS END=22173091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 22173092 . G . PASS END=22173092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 22173847 . C . PASS END=22173850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 22173851 . G . PASS END=22173854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 22173855 . C . PASS END=22173855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 22173856 . T . PASS END=22173864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 22173865 . T . PASS END=22173865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr1 22173866 . A . PASS END=22173866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,647:0,57,255:19,0 chr1 22173867 . G . PASS END=22173880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:26,0 chr1 22173881 . G . PASS END=22173888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 22173889 . A . PASS END=22173891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 22173892 . C . PASS END=22173980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1134:0,85,255:34,0 chr1 22173981 . T . PASS END=22173985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 22173995 . C . PASS END=22173995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22174182 . C . PASS END=22174182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 22174183 . T . PASS END=22174183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 22174184 . G . PASS END=22174188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 22174189 . C . PASS END=22174189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 22174190 . G . PASS END=22174230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:14:0,41,482:0,41,255:19,0 chr1 22174231 . G . PASS END=22174259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 22174260 . C . PASS END=22174261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22174262 . G . PASS END=22174271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 22174272 . C . PASS END=22174277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22174278 . T . PASS END=22174278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 22174279 . T . PASS END=22174279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 22174280 . C . PASS END=22174294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 22174295 . A . PASS END=22174295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 22174296 . A . PASS END=22174321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 22174322 . A . PASS END=22174333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr1 22174451 . C . PASS END=22174451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:28,0 chr1 22174452 . G . PASS END=22174455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 22174456 . G . PASS END=22174456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 22174457 . A . PASS END=22174513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1057:0,80,255:33,0 chr1 22174514 . T . PASS END=22174514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:25,0 chr1 22174515 . A . PASS END=22174523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:29,0 chr1 22174524 . A . PASS END=22174542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:23:0,66,990:0,69,255:24,0 chr1 22174543 . T . PASS END=22174543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 22174544 . C . PASS END=22174552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,914:0,72,255:24,0 chr1 22174553 . T . PASS END=22174553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 22174554 . C . PASS END=22174554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22174555 . A . PASS END=22174555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 22174556 . C . PASS END=22174558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 22174559 . G . PASS END=22174562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,55,255:16,0 chr1 22174563 . G . PASS END=22174581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 22174582 . A . PASS END=22174582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 22174583 . C . PASS END=22174585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 22174586 . T . PASS END=22174586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 22175136 . C . PASS END=22175138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 22175139 . G . PASS END=22175139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 22175140 . T . PASS END=22175163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:25,0 chr1 22175164 . C . PASS END=22175167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1058:0,87,255:31,0 chr1 22175168 . T . PASS END=22175168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 22175169 . A . PASS END=22175176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1105:0,93,255:32,0 chr1 22175177 . T . PASS END=22175177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1117:0,65,255:31,0 chr1 22175178 . G . PASS END=22175192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1117:0,82,255:32,0 chr1 22175193 . C . PASS END=22175193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:29,0 chr1 22175194 . T . PASS END=22175265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1194:0,86,255:38,0 chr1 22175266 . A . PASS END=22175287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:27:0,69,1035:0,81,255:26,0 chr1 22175386 . A . PASS END=22175386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 22175387 . G . PASS END=22175388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 22175389 . G . PASS END=22175394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,736:0,69,255:24,0 chr1 22175395 . C . PASS END=22175395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 22175396 . A . PASS END=22175397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 22175398 . T . PASS END=22175398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,692:0,25,255:20,0 chr1 22175399 . A . PASS END=22175400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,806:0,42,255:22,0 chr1 22175401 . G . PASS END=22175421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr1 22175422 . G . PASS END=22175430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 22175431 . C . PASS END=22175431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,898:0,26,255:25,0 chr1 22175432 . T . PASS END=22175432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 22175433 . T . PASS END=22175434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 22175435 . C . PASS END=22175436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,864:0,64,255:26,0 chr1 22175437 . G . PASS END=22175438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 22175439 . G . PASS END=22175449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,901:0,61,255:26,0 chr1 22175450 . G . PASS END=22175450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22175451 . C . PASS END=22175451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 22175452 . C . PASS END=22175452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22175453 . G . PASS END=22175482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,898:0,62,255:26,0 chr1 22175483 . A . PASS END=22175483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 22175484 . G . PASS END=22175486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 22175487 . G . PASS END=22175487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 22175488 . G . PASS END=22175489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 22175490 . G . PASS END=22175490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 22175491 . T . PASS END=22175491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22175492 . C . PASS END=22175492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 22175493 . A . PASS END=22175496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 22175497 . G . PASS END=22175497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 22175498 . G . PASS END=22175506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 22175507 . T . PASS END=22175518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:18,0 chr1 22175519 . A . PASS END=22175524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,38,255:13,0 chr1 22176534 . C . PASS END=22176543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr1 22176544 . G . PASS END=22176554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 22176555 . G . PASS END=22176555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,2 chr1 22176556 . C . PASS END=22176556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,783:0,3,255:22,2 chr1 22176557 . C . PASS END=22176557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:23,0 chr1 22176558 . C . PASS END=22176568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 22176569 . G . PASS END=22176569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 22176570 . C . PASS END=22176580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 22176581 . G . PASS END=22176585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 22176586 . T . PASS END=22176587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22176588 . G . PASS END=22176595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22176596 . C . PASS END=22176596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 22176597 . A . PASS END=22176606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 22176607 . C . PASS END=22176607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1062:0,60,255:28,0 chr1 22176608 . A . PASS END=22176615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 22176616 . T . PASS END=22176628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,70,255:26,0 chr1 22176629 . C . PASS END=22176629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:20,0 chr1 22176630 . C . PASS END=22176630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22176631 . T . PASS END=22176633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 22176634 . G . PASS END=22176643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 22176644 . A . PASS END=22176645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22176646 . G . PASS END=22176650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 22176651 . T . PASS END=22176651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 22176652 . G . PASS END=22176654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22176655 . T . PASS END=22176664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 22176665 . C . PASS END=22176675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 22176676 . A . PASS END=22176676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22176677 . C . PASS END=22176677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22176678 . C . PASS END=22176678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 22176679 . C . PASS END=22176680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22176681 . A . PASS END=22176685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,776:0,52,255:19,0 chr1 22176847 . G . PASS END=22176847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 22176852 . T . PASS END=22176852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 22176856 . C . PASS END=22176868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:19,0 chr1 22176869 . C . PASS END=22176884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr1 22176885 . A . PASS END=22176885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 22176886 . C . PASS END=22176955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,817:0,69,255:25,0 chr1 22176956 . G . PASS END=22176972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:19,0 chr1 22176973 . T . PASS END=22176973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 22176974 . C . PASS END=22176991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 22177000 . A . PASS END=22177000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22178028 . C . PASS END=22178028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 22178039 . C . PASS END=22178042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 22178043 . T . PASS END=22178059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 22178060 . G . PASS END=22178060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 22178061 . C . PASS END=22178087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:26,0 chr1 22178088 . G . PASS END=22178090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 22178091 . T . PASS END=22178092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22178093 . G . PASS END=22178096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 22178097 . T . PASS END=22178097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22178098 . G . PASS END=22178110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 22178111 . G . PASS END=22178138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,978:0,67,255:26,0 chr1 22178139 . G . PASS END=22178139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22178140 . C . PASS END=22178143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,984:0,68,255:26,0 chr1 22178144 . T . PASS END=22178144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22178145 . T . PASS END=22178145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 22178146 . G . PASS END=22178146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22178147 . C . PASS END=22178150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22178151 . G . PASS END=22178155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22178156 . G . PASS END=22178159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 22178160 . T . PASS END=22178160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:23,0 chr1 22178161 . C . PASS END=22178179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr1 22178180 . G . PASS END=22178180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 22178181 . C . PASS END=22178190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 22178283 . C . PASS END=22178288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:10,0 chr1 22178289 . G . PASS END=22178299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 22178300 . C A, 0.01 DRAGENSnpHardQUAL DP=11;MQ=250.00;MQRankSum=1.423;ReadPosRankSum=1.423;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:8,1,0:2,0,0:29:6,0,50,36,349,385:6,0,255:8,0:5.3697e-03,2.9082e+01,8.2082e+01,6.4871e+01,4.1283e+02,4.1685e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,9,0,1:3,7,0,1 chr1 22178301 . C . PASS END=22178301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 22178302 . C . PASS END=22178332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr1 22178333 . G . PASS END=22178336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 22178337 . T . PASS END=22178349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 22178350 . T . PASS END=22178350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 22178351 . G . PASS END=22178384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:16,0 chr1 22178385 . G . PASS END=22178396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 22178397 . A . PASS END=22178397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:10,0 chr1 22178398 . T . PASS END=22178419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 22178581 . C . PASS END=22178608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 22178609 . C . PASS END=22178650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr1 22178651 . A . PASS END=22178651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 22178652 . C . PASS END=22178670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr1 22178671 . C . PASS END=22178715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,197:0,21,197:9,0 chr1 22178716 . T . PASS END=22178726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 22179193 . C . PASS END=22179202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 22179203 . A . PASS END=22179203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 22179204 . G . PASS END=22179231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:19,0 chr1 22179232 . C . PASS END=22179241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22179242 . G . PASS END=22179250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22179251 . G . PASS END=22179252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 22179253 . C . PASS END=22179273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 22179274 . C . PASS END=22179279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22179280 . A . PASS END=22179312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 22179313 . G . PASS END=22179313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 22179314 . C . PASS END=22179325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 22179412 . C . PASS END=22179414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,706:0,57,255:19,0 chr1 22179415 . G . PASS END=22179419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 22179420 . G . PASS END=22179420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 22179421 . G . PASS END=22179486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:23,0 chr1 22179487 . G . PASS END=22179487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 22179488 . T . PASS END=22179497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 22179498 . G . PASS END=22179498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 22179499 . G . PASS END=22179500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 22179501 . T . PASS END=22179501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 22179502 . C . PASS END=22179502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 22179503 . T . PASS END=22179503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 22179504 . G . PASS END=22179513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 22179514 . C . PASS END=22179539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 22179540 . G . PASS END=22179540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 22179541 . G . PASS END=22179552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 22179553 . G . PASS END=22179563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 22180686 . C . PASS END=22180699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 22180700 . G . PASS END=22180724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:13,0 chr1 22180725 . C . PASS END=22180732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,537:0,42,255:16,0 chr1 22180733 . G . PASS END=22180742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 22180743 . C . PASS END=22180744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 22180745 . T . PASS END=22180774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr1 22180775 . C . PASS END=22180775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 22180776 . A . PASS END=22180787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 22180788 . C . PASS END=22180788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 22180789 . A . PASS END=22180795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 22180796 . G . PASS END=22180822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,49,255:19,0 chr1 22180823 . C . PASS END=22180829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:13,0 chr1 22180830 . C . PASS END=22180830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:10,0 chr1 22180831 . G . PASS END=22180836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 22181104 . C . PASS END=22181115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,402:0,33,255:12,0 chr1 22181116 . A . PASS END=22181116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 22181117 . G . PASS END=22181118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 22181119 . C . LowGQ END=22181119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:12,0 chr1 22181120 . A . PASS END=22181120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 22181121 . G . PASS END=22181122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 22181123 . C . PASS END=22181125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 22181126 . C . PASS END=22181126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 22181127 . C . PASS END=22181127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 22181128 . C . PASS END=22181128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 22181129 . C . PASS END=22181129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 22181130 . C . PASS END=22181130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:14,0 chr1 22181131 . T . PASS END=22181131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 22181132 . C . PASS END=22181132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 22181133 . G . PASS END=22181133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 22181134 . C . PASS END=22181134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr1 22181135 . C . PASS END=22181136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 22181137 . G . PASS END=22181138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 22181139 . A . PASS END=22181139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 22181140 . C . PASS END=22181140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 22181141 . C . PASS END=22181141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 22181142 . A . PASS END=22181142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,604:0,23,255:17,0 chr1 22181143 . G . PASS END=22181144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 22181145 . T . PASS END=22181145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 22181146 . G . PASS END=22181146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 22181147 . A . PASS END=22181150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 22181151 . G . PASS END=22181153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr1 22181154 . C . PASS END=22181154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 22181155 . A . PASS END=22181168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 22181169 . C . PASS END=22181173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 22181174 . A . PASS END=22181174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 22181175 . C . PASS END=22181175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 22181176 . A . PASS END=22181176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 22181177 . C . PASS END=22181177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 22181178 . A . PASS END=22181178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:21,0 chr1 22181179 . G . PASS END=22181179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 22181180 . T . PASS END=22181180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 22181181 . T . PASS END=22181182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 22181183 . A . PASS END=22181183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 22181184 . G . PASS END=22181188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 22181189 . A . PASS END=22181189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 22181190 . G . PASS END=22181210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,828:0,75,255:25,0 chr1 22181211 . A . PASS END=22181212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 22181213 . G . PASS END=22181226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,922:0,62,255:24,0 chr1 22181227 . A . PASS END=22181228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr1 22181229 . T . PASS END=22181241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 22181242 . T . PASS END=22181242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:20,0 chr1 22181243 . G . PASS END=22181254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 22181255 . G . PASS END=22181258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 22181329 . G . PASS END=22181329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:18,0 chr1 22181341 . C . PASS END=22181341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:28,0 chr1 22181342 . T . PASS END=22181342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 22181343 . G . PASS END=22181352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:30,0 chr1 22181353 . C . PASS END=22181353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 22181354 . C . PASS END=22181354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22181355 . A . PASS END=22181355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 22181356 . C . PASS END=22181356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22181357 . T . PASS END=22181358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:29,0 chr1 22181359 . G . PASS END=22181450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,83,255:36,0 chr1 22181451 . G . PASS END=22181451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22181452 . C . PASS END=22181452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:25,0 chr1 22181453 . G . PASS END=22181472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,65,255:26,0 chr1 22181473 . G . PASS END=22181476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,790:0,50,255:18,0 chr1 22181797 . C . PASS END=22181797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22181798 . T . PASS END=22181798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22181799 . G . PASS END=22181814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,47,255:19,0 chr1 22181815 . C . PASS END=22181829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:22,0 chr1 22181830 . G . PASS END=22181831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 22181832 . T . PASS END=22181877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,839:0,68,255:26,0 chr1 22181878 . G . PASS END=22181881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 22181882 . C . PASS END=22181904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,901:0,64,255:26,0 chr1 22181905 . C . PASS END=22181910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 22181911 . G . PASS END=22181933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,856:0,72,255:24,0 chr1 22181934 . C . PASS END=22181934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:21,0 chr1 22181935 . G . PASS END=22181939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 22182016 . C . PASS END=22182065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,853:0,66,255:26,0 chr1 22182066 . G . PASS END=22182071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 22182072 . C . PASS END=22182076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22182077 . G . PASS END=22182077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22182078 . T . PASS END=22182102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 22182103 . C . PASS END=22182110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 22182111 . A . PASS END=22182121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22182122 . G . PASS END=22182122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 22182123 . C . PASS END=22182168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,908:0,72,255:26,0 chr1 22182271 . C . PASS END=22182272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1063:0,84,255:30,0 chr1 22182280 . C . PASS END=22182372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1188:0,91,255:39,0 chr1 22182373 . T . PASS END=22182405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 22183508 . C . PASS END=22183529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 22183530 . G . PASS END=22183552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,730:0,63,255:25,0 chr1 22183553 . T . PASS END=22183553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 22183554 . G . PASS END=22183555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22183556 . A . PASS END=22183556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 22183557 . G . PASS END=22183564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,986:0,75,255:26,0 chr1 22183565 . A . PASS END=22183593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1039:0,81,255:31,0 chr1 22183594 . A . PASS END=22183594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:29,0 chr1 22183595 . C . PASS END=22183613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1133:0,93,255:31,0 chr1 22183614 . G . PASS END=22183614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 22183615 . C . PASS END=22183641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1149:0,90,255:31,0 chr1 22183642 . A . PASS END=22183642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 22183643 . G . PASS END=22183669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1117:0,80,255:29,0 chr1 22183670 . C . PASS END=22183672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,67,255:26,0 chr1 22183673 . G . PASS END=22183673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 22183674 . G . PASS END=22183676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 22183677 . A . PASS END=22183688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:20:0,51,765:0,60,255:19,0 chr1 22183778 . C . PASS END=22183778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22183779 . T . PASS END=22183780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22183781 . G . PASS END=22183788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 22183789 . C . PASS END=22183790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 22183791 . G . PASS END=22183793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22183794 . C . PASS END=22183795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22183796 . G . PASS END=22183838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr1 22183839 . T . PASS END=22183878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,568:0,48,255:19,0 chr1 22186059 . C . PASS END=22186065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 22186066 . C . PASS END=22186069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 22186070 . A . PASS END=22186071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1053:0,71,255:27,0 chr1 22186072 . C . PASS END=22186072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22186073 . T . PASS END=22186073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 22186074 . C . PASS END=22186075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22186076 . G . PASS END=22186076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 22186077 . C . PASS END=22186082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1078:0,90,255:30,0 chr1 22186083 . T . PASS END=22186083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 22186084 . G . PASS END=22186135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1117:0,80,255:31,0 chr1 22186136 . G . PASS END=22186169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:26,0 chr1 22186328 . C . PASS END=22186328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22186329 . T . PASS END=22186329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 22186330 . T . PASS END=22186336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 22186337 . G . PASS END=22186337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 22186338 . C . PASS END=22186361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,709:0,63,255:23,0 chr1 22186362 . C . PASS END=22186362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 22186363 . C . PASS END=22186389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 22186390 . T . PASS END=22186390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:20,0 chr1 22186391 . A . PASS END=22186393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 22186394 . G . PASS END=22186404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,806:0,53,255:19,0 chr1 22186405 . C . PASS END=22186412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 22186413 . C . PASS END=22186415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22186416 . A . PASS END=22186416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22186417 . C . PASS END=22186458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 22186459 . G . PASS END=22186459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 22186460 . C . PASS END=22186474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:15,0 chr1 22186475 . C . PASS END=22186475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 22186476 . C . PASS END=22186491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 22186492 . T . PASS END=22186495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 22186670 . T . PASS END=22186691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 22186692 . T . PASS END=22186692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 22186693 . T . PASS END=22186728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,598:0,44,255:19,0 chr1 22188250 . T . PASS END=22188252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 22188253 . T . PASS END=22188253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 22188254 . C . PASS END=22188262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,698:0,54,255:19,0 chr1 22188263 . G . PASS END=22188268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:22,0 chr1 22188269 . T . PASS END=22188269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,617:0,18,255:20,0 chr1 22188270 . G . PASS END=22188279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:22,0 chr1 22188280 . T . PASS END=22188280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 22188281 . C . PASS END=22188336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,845:0,66,255:26,0 chr1 22188471 . G . PASS END=22188471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 22188481 . A . PASS END=22188481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22188482 . T . PASS END=22188485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:20,0 chr1 22188486 . C . PASS END=22188505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:23,0 chr1 22188506 . A . PASS END=22188506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 22188507 . G . PASS END=22188510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22188511 . C . PASS END=22188511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 22188512 . A . PASS END=22188581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,886:0,66,255:26,0 chr1 22188582 . C . PASS END=22188605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 22188606 . T . PASS END=22188608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22190579 . C . PASS END=22190579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 22190588 . C . PASS END=22190588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 22190593 . C . PASS END=22190598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 22190599 . G . PASS END=22190599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr1 22190600 . G . PASS END=22190686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1125:0,90,255:38,0 chr1 22190687 . G . PASS END=22190687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:27,0 chr1 22190688 . T . PASS END=22190689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 22190690 . T . PASS END=22190690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 22190691 . A . PASS END=22190700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:28,0 chr1 22190701 . A . PASS END=22190701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22190702 . C . PASS END=22190706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:28:0,54,810:0,74,255:19,0 chr1 22190708 . T . PASS END=22190708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:45:30:0,45,675:0,90,255:15,0 chr1 22191336 . C . PASS END=22191336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 22191337 . T . PASS END=22191366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:18,0 chr1 22191367 . C . PASS END=22191367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 22191368 . A . PASS END=22191376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr1 22191377 . C . PASS END=22191409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,823:0,63,255:26,0 chr1 22191410 . G . PASS END=22191416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22191417 . C . PASS END=22191417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22191418 . T . PASS END=22191424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 22191425 . C . PASS END=22191433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 22191434 . T . PASS END=22191434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 22191435 . G . PASS END=22191447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 22191448 . C . PASS END=22191448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:27,0 chr1 22191449 . T . PASS END=22191453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 22191454 . G A, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=3.443;FractionInformativeReads=0.968;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:7,8,0:8,7,0:47:85,0,47,185,185,185:255,0,255:14,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,6,7,8:9,6,4,11 chr1 22191455 . C . PASS END=22191491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1139:0,80,255:31,0 chr1 22191492 . C . PASS END=22191519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 22191520 . A . PASS END=22191524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22191525 . C . PASS END=22191525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 22191526 . T . PASS END=22191547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,653:0,54,255:18,0 chr1 22191548 . C . PASS END=22191548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 22191549 . G . PASS END=22191564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:15,0 chr1 22191565 . T . PASS END=22191566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22191578 . G . PASS END=22191578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 22191778 . C . PASS END=22191798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,925:0,62,255:26,0 chr1 22191799 . G . PASS END=22191803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 22191804 . T . PASS END=22191806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 22191807 . T . PASS END=22191815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr1 22191816 . C . PASS END=22191816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 22191817 . C . PASS END=22191825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:32,0 chr1 22191826 . T . PASS END=22191826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 22191827 . G . PASS END=22191839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1169:0,80,255:29,0 chr1 22191840 . C . PASS END=22191843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22191844 . C . PASS END=22191844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22191845 . A . PASS END=22191858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:26,0 chr1 22192206 . T . PASS END=22192206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:25,0 chr1 22192210 . C . PASS END=22192212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 22192213 . G . PASS END=22192214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 22192215 . T . PASS END=22192215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 22192216 . C . PASS END=22192220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 22192221 . C . PASS END=22192221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22192222 . A . PASS END=22192239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1131:0,84,255:30,0 chr1 22192240 . G . PASS END=22192240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 22192241 . C . PASS END=22192283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1141:0,90,255:33,0 chr1 22192284 . T . PASS END=22192284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:27,0 chr1 22192285 . C . PASS END=22192287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 22192288 . A . PASS END=22192295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 22192296 . C . PASS END=22192302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 22195378 . C . PASS END=22195381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 22195382 . T . PASS END=22195382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 22195383 . C . PASS END=22195387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 22195388 . A . PASS END=22195388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:24,0 chr1 22195389 . G . PASS END=22195399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,909:0,64,255:26,0 chr1 22195400 . G . PASS END=22195401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 22195402 . C . PASS END=22195404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 22195405 . C . PASS END=22195405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:24,0 chr1 22195406 . T . PASS END=22195408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:24,0 chr1 22195409 . C . PASS END=22195409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:23,0 chr1 22195410 . A . PASS END=22195415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 22195416 . A . PASS END=22195416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,903:0,45,255:25,0 chr1 22195417 . G . PASS END=22195420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22195421 . C . PASS END=22195421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 22195422 . T . PASS END=22195423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 22195424 . C . PASS END=22195426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:42:27:0,42,884:0,42,255:25,0 chr1 22195427 . G . PASS END=22195427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 22195428 . G . PASS END=22195428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:23,0 chr1 22195429 . A . PASS END=22195429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:24,0 chr1 22195430 . A . LowGQ END=22195430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,795:7,0,255:21,0 chr1 22195431 . G . PASS END=22195431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:24,0 chr1 22195432 . C . LowGQ END=22195434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,745:0,0,255:22,0 chr1 22195435 . A . PASS END=22195435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:23,0 chr1 22195436 . G . PASS END=22195436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:23,0 chr1 22195437 . A . PASS END=22195437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,707:0,9,255:22,0 chr1 22195438 . G . PASS END=22195438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,851:0,23,255:23,0 chr1 22195439 . A . PASS END=22195439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 22195440 . A . PASS END=22195441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 22195442 . C . PASS END=22195442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,773:0,25,255:22,0 chr1 22195443 . C . PASS END=22195443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:22,0 chr1 22195444 . T . PASS END=22195445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22195446 . C . PASS END=22195446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:21,0 chr1 22195447 . G . LowGQ END=22195447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,737:3,0,255:20,0 chr1 22195448 . T . PASS END=22195450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,770:0,42,255:22,0 chr1 22195451 . G . PASS END=22195451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:11:25:0,11,765:0,11,255:20,0 chr1 22195452 . A . PASS END=22195452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:21,0 chr1 22195453 . G . PASS END=22195453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr1 22195454 . A . PASS END=22195454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,723:0,3,255:20,0 chr1 22195455 . G . PASS END=22195455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:20,0 chr1 22195456 . A . PASS END=22195456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:18,0 chr1 22195457 . G . PASS END=22195457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:17,0 chr1 22195458 . A . PASS END=22195458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22195459 . G . PASS END=22195459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,674:0,36,255:17,0 chr1 22195460 . A . PASS END=22195461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:19,0 chr1 22195959 . C . PASS END=22195960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 22195961 . G . PASS END=22195962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:29,0 chr1 22195963 . G . PASS END=22195963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 22195964 . A . PASS END=22195964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:30,0 chr1 22195965 . G . PASS END=22195966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 22195967 . C . PASS END=22195967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,961:0,43,255:28,0 chr1 22195968 . T . PASS END=22195968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:30,0 chr1 22195969 . G . PASS END=22195970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1074:0,93,255:31,0 chr1 22195971 . T . PASS END=22195971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:30,0 chr1 22195972 . G . PASS END=22195974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1036:0,93,255:31,0 chr1 22195975 . A . PASS END=22195975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:7:32:0,7,749:0,7,255:28,0 chr1 22195976 . A . PASS END=22195976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,996:0,63,255:30,0 chr1 22195977 . A . PASS END=22195979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1095:0,82,255:33,0 chr1 22195980 . C . PASS END=22195980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1038:0,60,255:32,0 chr1 22195981 . A . PASS END=22195982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1091:0,83,255:33,0 chr1 22195983 . A . PASS END=22195984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,997:0,65,255:31,0 chr1 22195985 . A . PASS END=22195986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1044:0,82,255:32,0 chr1 22195987 . G . PASS END=22195987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1089:0,68,255:32,0 chr1 22195988 . C . PASS END=22195989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1127:0,82,255:33,0 chr1 22195990 . G . PASS END=22195990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 22195991 . A . PASS END=22195992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1082:0,82,255:32,0 chr1 22195993 . G . PASS END=22195993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1121:0,63,255:33,0 chr1 22195994 . A . PASS END=22195994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1055:0,38,255:30,0 chr1 22195995 . A . PASS END=22195995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1034:0,69,255:31,0 chr1 22195996 . G . PASS END=22195999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1099:0,88,255:34,0 chr1 22196000 . A . PASS END=22196000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1116:0,33,255:32,0 chr1 22196001 . G . PASS END=22196002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1327:0,95,255:35,0 chr1 22196003 . A . PASS END=22196004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1152:0,78,255:34,0 chr1 22196005 . G . PASS END=22196005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1131:0,45,255:33,0 chr1 22196006 . A . LowGQ END=22196006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,972:11,0,255:30,0 chr1 22196007 . G . PASS END=22196008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1213:0,91,255:35,0 chr1 22196009 . A . PASS END=22196009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:30:36:0,30,1066:0,30,255:32,0 chr1 22196010 . G . PASS END=22196014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1197:0,91,255:36,0 chr1 22196015 . A . PASS END=22196015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1095:0,61,255:33,0 chr1 22196016 . A . PASS END=22196018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1177:0,94,255:36,0 chr1 22196019 . A . PASS END=22196019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:34,0 chr1 22196020 . G . PASS END=22196022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 22196023 . G . PASS END=22196023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:35,0 chr1 22196024 . G . PASS END=22196024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1115:0,45,255:32,0 chr1 22196025 . A . PASS END=22196025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:33,0 chr1 22196026 . G . PASS END=22196037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1086:0,91,255:35,0 chr1 22196038 . A . PASS END=22196038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:30,0 chr1 22196039 . G . PASS END=22196042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 22196043 . A . PASS END=22196043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 22196044 . G . PASS END=22196044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 22196045 . C . PASS END=22196045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:30,0 chr1 22196046 . T . PASS END=22196050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:31,0 chr1 22196051 . G . PASS END=22196059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:30:0,60,956:0,60,255:26,0 chr1 22196060 . G . PASS END=22196060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22196061 . A . PASS END=22196061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:26,0 chr1 22196062 . G . PASS END=22196062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:27,0 chr1 22196063 . G . PASS END=22196063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,883:0,51,255:27,0 chr1 22196064 . A . PASS END=22196064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22196065 . G . PASS END=22196065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,909:0,57,255:26,0 chr1 22196066 . A . PASS END=22196066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:26,0 chr1 22196067 . G . LowGQ END=22196067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,654:10,0,255:22,0 chr1 22196068 . A . PASS END=22196068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 22196069 . G . LowGQ END=22196069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,7:28:0:28:0,0,512:61,0,255:18,0 chr1 22196070 . C . PASS END=22196073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:23,0 chr1 22196074 . T . PASS END=22196074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:22,0 chr1 22196075 . G . PASS END=22196075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 22196076 . G . PASS END=22196076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:21,0 chr1 22196077 . G . PASS END=22196078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:23,0 chr1 22196079 . A . PASS END=22196087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,52,255:19,0 chr1 22196088 . G . PASS END=22196088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:17,0 chr1 22196089 . G . PASS END=22196105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 22196106 . G . PASS END=22196107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22196108 . A . PASS END=22196108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 22196109 . C . PASS END=22196110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 22196111 . G . PASS END=22196111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:19,0 chr1 22196112 . G . PASS END=22196112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22196113 . A . PASS END=22196127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:19,0 chr1 22196128 . G . PASS END=22196128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 22196129 . C . PASS END=22196136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 22196137 . C . PASS END=22196137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 22196138 . G . PASS END=22196142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 22196143 . T . PASS END=22196143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 22196144 . G . PASS END=22196145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22196146 . G . PASS END=22196156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 22196706 . C . PASS END=22196713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:24,0 chr1 22196714 . C . PASS END=22196714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 22196715 . C . PASS END=22196720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 22196721 . T . PASS END=22196778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1002:0,81,255:35,0 chr1 22196779 . A . PASS END=22196779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 22196780 . A . PASS END=22196781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 22196782 . T . PASS END=22196782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:30,0 chr1 22196783 . G . PASS END=22196865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,83,255:38,0 chr1 22196866 . A . PASS END=22196867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22196868 . G . PASS END=22196870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22196871 . C . PASS END=22196879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 22197327 . C . PASS END=22197331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22197332 . G . PASS END=22197333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 22197334 . G . PASS END=22197343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 22197344 . T . PASS END=22197344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 22197345 . C . PASS END=22197358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 22197359 . C . PASS END=22197360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22197361 . T . PASS END=22197361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:18,2 chr1 22197362 . C . PASS END=22197362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,783:0,3,255:18,2 chr1 22197363 . C . PASS END=22197363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:18,0 chr1 22197364 . C . PASS END=22197365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 22198618 . C . PASS END=22198618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22198679 . C . PASS END=22198680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 22198681 . T . PASS END=22198689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 22198690 . G . PASS END=22198692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22198693 . A . PASS END=22198695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1070:0,74,255:27,0 chr1 22198696 . T . PASS END=22198702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 22198703 . C . PASS END=22198705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22198706 . C . PASS END=22198720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 22198721 . C . PASS END=22198721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 22198722 . T . PASS END=22198729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 22198730 . G . PASS END=22198734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 22198735 . G . PASS END=22198755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 22198756 . G . PASS END=22198757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 22198758 . T . PASS END=22198758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 22198759 . G . PASS END=22198770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,71,255:21,0 chr1 22198771 . G . PASS END=22198782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:22:0,48,720:0,53,255:19,0 chr1 22198783 . C . PASS END=22198783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 22198784 . A . PASS END=22198784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 22198785 . G . PASS END=22198792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:24,0 chr1 22198793 . T . PASS END=22198793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 22198794 . C . PASS END=22198794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr1 22198795 . C . PASS END=22198795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 22198796 . T . PASS END=22198801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 22198802 . G . PASS END=22198803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 22198804 . G . PASS END=22198804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 22198805 . G . PASS END=22198805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 22198806 . C . PASS END=22198806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 22198807 . T . PASS END=22198807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:26,0 chr1 22198808 . G . PASS END=22198809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 22198810 . T . PASS END=22198810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,779:0,28,255:26,0 chr1 22198811 . T . PASS END=22198815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 22198816 . G . PASS END=22198816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:25,0 chr1 22198817 . T . PASS END=22198817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:24,0 chr1 22198818 . G . PASS END=22198818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22198819 . G . PASS END=22198819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:25,0 chr1 22198820 . G . PASS END=22198820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22198821 . T . PASS END=22198821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 22198822 . T . PASS END=22198824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22198825 . C . PASS END=22198828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,984:0,65,255:26,0 chr1 22198829 . G . PASS END=22198829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22198830 . G . PASS END=22198830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,931:0,32,255:26,0 chr1 22198831 . C . PASS END=22198842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,67,255:26,0 chr1 22198843 . A . PASS END=22198852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22198853 . G . PASS END=22198853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 22198854 . G . PASS END=22198857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,574:0,40,255:19,0 chr1 22198858 . A . PASS END=22198858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,585:0,21,255:17,0 chr1 22198859 . G . PASS END=22198860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 22198861 . G . PASS END=22198861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:16,0 chr1 22198862 . G . PASS END=22198869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,674:0,44,255:17,0 chr1 22198870 . T . PASS END=22198870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 22199113 . C . PASS END=22199113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 22199114 . A . PASS END=22199118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 22199119 . G . PASS END=22199119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 22199120 . C . PASS END=22199120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 22199121 . G . PASS END=22199144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:19,0 chr1 22199145 . G . PASS END=22199175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,853:0,63,255:24,0 chr1 22199176 . G . PASS END=22199176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:22,0 chr1 22199177 . C . PASS END=22199214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,939:0,72,255:25,0 chr1 22199215 . G . PASS END=22199215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 22199216 . G . PASS END=22199234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 22199235 . T . PASS END=22199235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 22199236 . G . PASS END=22199245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22199246 . A . PASS END=22199253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22199352 . C . PASS END=22199356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 22199357 . A . PASS END=22199358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 22199359 . C . PASS END=22199361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22199362 . C . PASS END=22199375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr1 22199376 . A . PASS END=22199376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 22199377 . T . PASS END=22199401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:25,0 chr1 22199402 . C . PASS END=22199402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 22199403 . G . PASS END=22199404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22199405 . C . PASS END=22199405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 22199406 . T . PASS END=22199413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr1 22199414 . G A, 48.34 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=3.529;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:8,7,0:7,4,0:47:83,0,50,328,537,864:255,0,255:14,0:4.8344e+01,8.5425e-05,5.3000e+01,3.2780e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,7,4:8,7,3,8 chr1 22199415 . A . PASS END=22199451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,917:0,75,255:25,0 chr1 22199452 . G . PASS END=22199543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,872:0,65,255:26,0 chr1 22199544 . G . PASS END=22199544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 22199545 . T . PASS END=22199557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,945:0,65,255:26,0 chr1 22199558 . C . PASS END=22199563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22199564 . G . PASS END=22199584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,923:0,62,255:26,0 chr1 22199868 . T . PASS END=22199912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 22199913 . C . PASS END=22199914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 22199915 . C . PASS END=22199917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22200418 . C . PASS END=22200418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 22200419 . T . PASS END=22200419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,521:0,2,255:17,0 chr1 22200420 . C . PASS END=22200426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 22200427 . T . PASS END=22200427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:16,0 chr1 22200428 . G . PASS END=22200435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:18,0 chr1 22200436 . C . PASS END=22200436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22200437 . T . PASS END=22200437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 22200438 . G . PASS END=22200438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22200439 . T . PASS END=22200439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 22200440 . G . PASS END=22200440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 22200441 . G . PASS END=22200442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 22200443 . C . PASS END=22200446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22200447 . G . PASS END=22200447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 22200448 . G . PASS END=22200449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22200450 . G . PASS END=22200450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 22200451 . C . PASS END=22200452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22200453 . C . PASS END=22200454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 22200455 . C . PASS END=22200464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:22,0 chr1 22200465 . G . PASS END=22200465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 22200466 . G . PASS END=22200469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 22200470 . G . PASS END=22200470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 22200471 . G . PASS END=22200472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22200473 . C T, 50.00 PASS DP=22;MQ=249.38;MQRankSum=3.059;ReadPosRankSum=1.290;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,16,0:0.727,0.000:22:3,8,0:3,8,0:41:85,0,39,572,186,758:255,0,136:6,0:5.0000e+01,3.1194e-04,4.2087e+01,4.5000e+02,2.2056e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,5,11:3,3,9,7 chr1 22200474 . G . PASS END=22200479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22200480 . G . PASS END=22200481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 22200482 . C . PASS END=22200482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:19,0 chr1 22200483 . C . PASS END=22200484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22200485 . G . PASS END=22200485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22200486 . A . PASS END=22200487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 22200488 . A . PASS END=22200488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22200489 . A . PASS END=22200499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,47,255:18,0 chr1 22200500 . C . PASS END=22200504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 22200895 . G . PASS END=22200895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 22200899 . T . PASS END=22200899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 22200900 . G . PASS END=22200903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 22200904 . G . PASS END=22200904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 22200905 . G . PASS END=22200960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:33:0,88,1219:0,88,255:40,0 chr1 22200961 . G . PASS END=22200997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:33:0,88,1350:0,88,255:40,0 chr1 22200998 . C T, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.697;ReadPosRankSum=-0.243;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,21,0:0.636,0.000:33:6,10,0:6,11,0:46:85,0,45,751,429,1180:255,0,255:12,0:5.0000e+01,1.1882e-04,4.7600e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,13,8:6,6,12,9 chr1 22200999 . G . PASS END=22201006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1202:0,83,255:30,0 chr1 22201007 . T . PASS END=22201024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:23,0 chr1 22201025 . C . PASS END=22201026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 22201109 . C . PASS END=22201110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 22201111 . G . PASS END=22201111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 22201112 . G . PASS END=22201114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 22201115 . G . PASS END=22201115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 22201116 . G . PASS END=22201125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:26,0 chr1 22201126 . C . PASS END=22201132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:29,0 chr1 22201133 . G . PASS END=22201133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr1 22201134 . C . PASS END=22201143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1111:0,90,255:30,0 chr1 22201144 . A . PASS END=22201144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 22201145 . G . PASS END=22201157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 22201158 . C . PASS END=22201158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 22201159 . T . PASS END=22201165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:33,0 chr1 22201166 . T . PASS END=22201166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1135:0,63,255:32,0 chr1 22201167 . T . PASS END=22201184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:33,0 chr1 22201185 . A . PASS END=22201222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,984:0,65,255:26,0 chr1 22201384 . C . PASS END=22201407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:26,0 chr1 22201408 . G . PASS END=22201408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 22201409 . G . PASS END=22201409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22201410 . G . PASS END=22201411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,868:0,48,255:25,0 chr1 22201412 . G . PASS END=22201414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 22201415 . C . PASS END=22201440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1153:0,80,255:30,0 chr1 22201441 . G . PASS END=22201441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 22201442 . G . PASS END=22201446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 22201447 . C . PASS END=22201447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,955:0,35,255:27,0 chr1 22201448 . T . PASS END=22201486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1033:0,87,255:31,0 chr1 22201487 . C . PASS END=22201487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 22201488 . C . PASS END=22201488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22201489 . A . PASS END=22201495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1053:0,71,255:26,0 chr1 22202107 . C . PASS END=22202107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22202122 . C . PASS END=22202129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 22202130 . A . PASS END=22202130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 22202131 . G . PASS END=22202146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1186:0,93,255:39,0 chr1 22202147 . A . PASS END=22202209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:38:0,96,1440:0,96,255:40,0 chr1 22202210 . C . PASS END=22202210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr1 22202211 . T . PASS END=22202212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 22202213 . G . PASS END=22202213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 22202214 . C . PASS END=22202240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:32,0 chr1 22202346 . T . PASS END=22202346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 22202348 . T . PASS END=22202348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 22202356 . C . PASS END=22202367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,908:0,72,255:24,0 chr1 22202368 . C . PASS END=22202368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 22202369 . A . PASS END=22202417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,908:0,72,255:26,0 chr1 22202418 . G . PASS END=22202418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22202419 . C . PASS END=22202446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 22202447 . A . PASS END=22202447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 22202448 . C . PASS END=22202453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 22202454 . A . PASS END=22202454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:20,0 chr1 22202455 . C . PASS END=22202461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:21,0 chr1 22202462 . C . PASS END=22202473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 22202474 . G . PASS END=22202474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22202475 . T . PASS END=22202533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,45,255:19,0 chr1 22202534 . A . PASS END=22202534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 22202535 . C . PASS END=22202535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 22202708 . C . PASS END=22202708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 22202722 . C . PASS END=22202722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22202723 . T . PASS END=22202723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:27,0 chr1 22202724 . T . PASS END=22202725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22202726 . T . PASS END=22202726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,931:0,40,255:27,0 chr1 22202727 . C . PASS END=22202730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 22202731 . C . PASS END=22202731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 22202732 . A . PASS END=22202735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:31,0 chr1 22202736 . A . PASS END=22202736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 22202737 . G . PASS END=22202739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1202:0,86,255:34,0 chr1 22202740 . T . PASS END=22202740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 22202741 . G . PASS END=22202898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1280:0,89,255:40,1 chr1 22203005 . C . PASS END=22203143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:37:0,81,1215:0,95,255:40,0 chr1 22203144 . T . PASS END=22203145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:26,0 chr1 22204673 . G . PASS END=22204673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 22204679 . C . PASS END=22204685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 22204686 . C . PASS END=22204686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 22204687 . G . PASS END=22204741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,876:0,69,255:25,0 chr1 22204742 . C . PASS END=22204743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22204744 . G . PASS END=22204746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 22204926 . T . PASS END=22204927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22204928 . A . PASS END=22204932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 22204933 . C . PASS END=22204933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 22204934 . C . PASS END=22204936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 22204937 . C . PASS END=22204937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 22204938 . A . PASS END=22204950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 22204951 . C . PASS END=22204966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,53,255:19,0 chr1 22204967 . T . PASS END=22204967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 22204968 . C . PASS END=22204980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 22204981 . A . PASS END=22204981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,550:0,12,255:15,0 chr1 22204982 . C . PASS END=22204984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 22205060 . T . PASS END=22205060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,634:0,60,255:20,0 chr1 22205070 . C . PASS END=22205070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22205071 . T . PASS END=22205071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,693:0,35,255:20,0 chr1 22205072 . C . PASS END=22205078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22205079 . C . PASS END=22205087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 22205088 . G . PASS END=22205125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,869:0,62,255:25,0 chr1 22205126 . A . PASS END=22205126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 22205127 . T . PASS END=22205137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 22205138 . G . PASS END=22205138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 22205139 . A . PASS END=22205139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22205140 . A . PASS END=22205140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 22205141 . G . PASS END=22205151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22205152 . A . PASS END=22205156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22205487 . C . PASS END=22205489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 22205490 . C . PASS END=22205490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 22205491 . G . PASS END=22205495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 22205496 . G . PASS END=22205496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 22205497 . C . PASS END=22205497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 22205498 . A . PASS END=22205499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 22205500 . C . PASS END=22205500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 22205501 . G . PASS END=22205501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 22205502 . A . PASS END=22205502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 22205503 . T . PASS END=22205503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 22205504 . G . PASS END=22205504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 22205505 . T . PASS END=22205505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 22205506 . A . PASS END=22205604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1115:0,80,255:38,0 chr1 22205605 . G . PASS END=22205614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 22206600 . C . PASS END=22206601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 22206602 . G . PASS END=22206611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:19,0 chr1 22206612 . A . PASS END=22206613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 22206614 . A . PASS END=22206632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:24,0 chr1 22206633 . G . PASS END=22206640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 22206641 . C . PASS END=22206642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22206643 . T . PASS END=22206648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 22206649 . T C, 48.12 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=3.299;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:7,7,0:10,5,0:47:83,0,50,429,608,1037:255,0,255:17,0:4.8121e+01,8.8790e-05,5.3000e+01,4.2899e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,9,3:12,5,4,8 chr1 22206650 . T . PASS END=22206650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 22206651 . G . PASS END=22206656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr1 22206657 . A . PASS END=22206657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 22206658 . G . PASS END=22206686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1033:0,87,255:31,0 chr1 22206687 . C . PASS END=22206696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 22206697 . A . PASS END=22206697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 22206698 . A . PASS END=22206702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 22206703 . G . PASS END=22206707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:25,0 chr1 22206708 . A . PASS END=22206708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:24,0 chr1 22206709 . C . PASS END=22206717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:25,0 chr1 22206718 . C . PASS END=22206718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr1 22206719 . A . PASS END=22206733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:25,0 chr1 22206734 . A . PASS END=22206734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:20,0 chr1 22206735 . G . PASS END=22206738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 22206739 . A . PASS END=22206739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:19,0 chr1 22206740 . T . PASS END=22206744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22206745 . C . PASS END=22206747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 22206852 . G . PASS END=22206852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 22206856 . C . PASS END=22206856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22206857 . T . PASS END=22206857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr1 22206858 . G . PASS END=22206858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:23,0 chr1 22206859 . C . PASS END=22206862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,992:0,68,255:26,0 chr1 22206863 . C . PASS END=22206904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:32:0,85,1180:0,85,255:36,0 chr1 22206905 . C . PASS END=22206911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1241:0,89,255:33,0 chr1 22206912 . A . PASS END=22206912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 22206913 . T . PASS END=22206941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1225:0,86,255:34,0 chr1 22206942 . G A, 48.52 PASS DP=35;MQ=250.00;MQRankSum=4.983;ReadPosRankSum=4.983;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,15,0:0.429,0.000:35:9,9,0:11,6,0:47:83,0,50,500,658,1157:255,0,255:19,0:4.8518e+01,8.2836e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,6,9:8,12,8,7 chr1 22206943 . G . PASS END=22206979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1247:0,86,255:34,0 chr1 22206980 . C . PASS END=22206997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:32,0 chr1 22206998 . C . PASS END=22206998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 22206999 . C . PASS END=22206999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22207000 . T . PASS END=22207001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22207002 . C . PASS END=22207002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22207003 . A . PASS END=22207011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:26,0 chr1 22207012 . G . PASS END=22207012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:22,0 chr1 22207013 . C . PASS END=22207029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:23,0 chr1 22207030 . C . PASS END=22207030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 22207031 . C . PASS END=22207031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 22207032 . A . PASS END=22207033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22207034 . A . PASS END=22207034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:17,0 chr1 22207035 . C . PASS END=22207036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 22207037 . C . PASS END=22207041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22207042 . A . PASS END=22207052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 22207149 . C . PASS END=22207156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 22207157 . A . PASS END=22207157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 22207158 . C . PASS END=22207158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 22207159 . T . PASS END=22207159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 22207160 . G . PASS END=22207160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 22207161 . G . PASS END=22207161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 22207162 . A . PASS END=22207163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 22207164 . C . PASS END=22207164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 22207165 . T . PASS END=22207194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:24,0 chr1 22207195 . G . PASS END=22207195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22207196 . G . PASS END=22207197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22207198 . G . PASS END=22207201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 22207202 . G . PASS END=22207202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 22207203 . G . PASS END=22207234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1041:0,80,255:31,0 chr1 22207235 . T C, 48.24 PASS DP=31;MQ=250.00;MQRankSum=4.664;ReadPosRankSum=1.942;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,13,0:0.419,0.000:31:8,8,0:10,5,0:47:83,0,50,465,644,1109:255,0,255:18,0:4.8240e+01,8.6978e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,3,10:7,11,6,7 chr1 22207236 . G . PASS END=22207245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 22207246 . T . PASS END=22207246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 22207247 . C . PASS END=22207259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 22207260 . T . PASS END=22207260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 22207261 . G . PASS END=22207272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 22207273 . C . PASS END=22207274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22207275 . A . PASS END=22207275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 22207276 . C . PASS END=22207276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,2 chr1 22207277 . G . PASS END=22207277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:7:31:0,7,992:0,7,255:25,2 chr1 22207278 . G . PASS END=22207278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1094:0,30,255:28,2 chr1 22207279 . G . PASS END=22207279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr1 22207280 . C . PASS END=22207282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 22207283 . A . PASS END=22207283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 22207284 . C . PASS END=22207289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 22207290 . G . PASS END=22207290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22207291 . C . PASS END=22207291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22207292 . G . PASS END=22207311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,853:0,69,255:26,0 chr1 22207312 . C . PASS END=22207312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 22207313 . C . PASS END=22207317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 22207318 . T . PASS END=22207323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 22207324 . T . PASS END=22207329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 22207832 . C . PASS END=22207852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:25,0 chr1 22207853 . A . PASS END=22207853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,821:0,45,255:23,0 chr1 22207854 . G . PASS END=22207868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,901:0,64,255:26,0 chr1 22207869 . G . PASS END=22207869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22207870 . A . PASS END=22207889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1155:0,80,255:34,0 chr1 22207890 . C . PASS END=22207890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr1 22207891 . G . PASS END=22207956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:34:0,82,1260:0,82,255:40,0 chr1 22207957 . G . PASS END=22207958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:69:34:0,69,1208:0,69,255:27,0 chr1 22207959 . G . PASS END=22207963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:28,0 chr1 22207964 . G . PASS END=22207964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:28,0 chr1 22207965 . C . PASS END=22207965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1123:0,80,255:28,0 chr1 22207966 . C . PASS END=22207967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:28,0 chr1 22207968 . G . PASS END=22207968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 22207969 . G . PASS END=22207969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 22207970 . C . PASS END=22207971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,0 chr1 22207972 . G . PASS END=22207972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 22207973 . C . PASS END=22207973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22207974 . G . PASS END=22207974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 22207975 . C . PASS END=22207976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22207977 . G . PASS END=22207981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 22207982 . T . PASS END=22207982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:26,0 chr1 22207983 . G . PASS END=22207983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:24,0 chr1 22207984 . T . PASS END=22207984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:23,0 chr1 22207985 . C . PASS END=22207986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:23,0 chr1 22207987 . C . PASS END=22207987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:23,0 chr1 22207988 . A . PASS END=22207989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:23,0 chr1 22207990 . T . PASS END=22207990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,929:0,29,255:23,0 chr1 22207991 . C . PASS END=22207992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:23,0 chr1 22207993 . C . PASS END=22207993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:20,0 chr1 22207994 . A . PASS END=22207995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,68,255:20,0 chr1 22211006 . C . PASS END=22211006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 22211016 . C . PASS END=22211016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 22211021 . C . PASS END=22211021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 22211022 . C . PASS END=22211023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 22211024 . T . PASS END=22211025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 22211026 . A . PASS END=22211026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 22211027 . A . PASS END=22211028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr1 22211029 . T . PASS END=22211030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 22211031 . A . PASS END=22211038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 22211039 . G . PASS END=22211170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1003:0,84,255:40,0 chr1 22211176 . C . PASS END=22211176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 22211177 . G . PASS END=22211177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 22211182 . G . PASS END=22211182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22211260 . C . PASS END=22211411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,86,255:40,0 chr1 22211506 . C . PASS END=22211506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22211507 . T . PASS END=22211513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22211514 . A . PASS END=22211514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 22211515 . G . PASS END=22211522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 22211523 . G . PASS END=22211526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 22211527 . C . PASS END=22211529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 22211530 . C . PASS END=22211538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 22211539 . C . PASS END=22211547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 22211548 . A . PASS END=22211549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 22211550 . G . PASS END=22211552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 22211553 . G . PASS END=22211555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 22211556 . G . PASS END=22211559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 22211560 . G . PASS END=22211560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 22211561 . G . PASS END=22211573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 22211574 . C . PASS END=22211607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 22211608 . G . PASS END=22211614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 22211615 . T . PASS END=22211620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 22211621 . C . PASS END=22211621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 22211622 . C . PASS END=22211622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:9,0 chr1 22211623 . C . PASS END=22211642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 22211643 . G . PASS END=22211643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 22211644 . G . PASS END=22211650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 22211813 . T . PASS END=22211942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:29:0,84,1100:0,87,255:40,0 chr1 22211943 . G . PASS END=22211943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 22211944 . G . PASS END=22211944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22213697 . C . PASS END=22213697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22213708 . G . PASS END=22213811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1039:0,83,255:40,0 chr1 22213812 . C . PASS END=22213827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 22213834 . G . PASS END=22213834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22213899 . C . PASS END=22213899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 22213908 . C . PASS END=22213908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22213913 . C . PASS END=22213917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:17,0 chr1 22213918 . T . PASS END=22213918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,717:0,38,255:16,0 chr1 22213919 . C . PASS END=22213948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 22213949 . C . PASS END=22213950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22213951 . T . PASS END=22213951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 22213952 . G . PASS END=22213954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 22213955 . C . PASS END=22213955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 22213956 . G . PASS END=22213962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 22213963 . A . PASS END=22213963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:20,0 chr1 22213964 . G . PASS END=22213967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr1 22213968 . G . PASS END=22213968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 22213969 . T . PASS END=22213981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 22213982 . A . PASS END=22213982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:18,0 chr1 22213983 . G . PASS END=22213983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 22213984 . T . PASS END=22213985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 22213986 . C . PASS END=22213986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22213987 . C . PASS END=22213994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:22:0,56,855:0,56,255:19,0 chr1 22213995 . G . PASS END=22213999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 22214000 . C . PASS END=22214000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 22214001 . G . PASS END=22214016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 22214017 . C . PASS END=22214018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22214019 . G . PASS END=22214029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,947:0,72,255:25,0 chr1 22214030 . T . PASS END=22214030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 22214031 . G . PASS END=22214047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr1 22214048 . G . PASS END=22214048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 22214049 . G . PASS END=22214089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 22214090 . T . PASS END=22214113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,70,255:24,0 chr1 22214114 . A . PASS END=22214114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr1 22214115 . T . PASS END=22214119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22214120 . T . PASS END=22214120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,688:0,44,255:19,0 chr1 22214121 . C . PASS END=22214123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 22214124 . C . PASS END=22214126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22214127 . A G, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,10,0:0,10,0:57:145,60,0,766,60,766:255,60,0:0,0:1.0719e+02,5.7191e+01,8.2835e-06,4.5000e+02,9.1961e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,10:0,0,12,8 chr1 22214128 . A . PASS END=22214132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22214133 . A . PASS END=22214134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22214135 . A . PASS END=22214164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 22214165 . C . PASS END=22214167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 22214431 . C . PASS END=22214438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,646:0,57,255:19,0 chr1 22214439 . A . PASS END=22214439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 22214440 . G . PASS END=22214440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:19,0 chr1 22214441 . C . PASS END=22214456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,670:0,60,255:23,0 chr1 22214457 . C . PASS END=22214457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 22214458 . T . PASS END=22214466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,908:0,61,255:25,0 chr1 22214467 . G . PASS END=22214467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 22214468 . C . PASS END=22214477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr1 22214478 . C . PASS END=22214485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 22214486 . C . PASS END=22214486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 22214487 . T . PASS END=22214495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 22214496 . A . PASS END=22214496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 22214497 . C . PASS END=22214499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22214500 . A . PASS END=22214522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 22214523 . A . PASS END=22214523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 22214524 . A . PASS END=22214530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 22214531 . C . PASS END=22214531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 22214532 . T . PASS END=22214537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 22214538 . C . PASS END=22214538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 22214539 . A . PASS END=22214550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 22214551 . A . PASS END=22214551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:22,0 chr1 22214552 . C . PASS END=22214559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 22215161 . C . PASS END=22215163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22215164 . G . PASS END=22215166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 22215167 . T . PASS END=22215167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:27,0 chr1 22215168 . C . PASS END=22215179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr1 22215180 . C . PASS END=22215184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,942:0,70,255:25,0 chr1 22215185 . C . PASS END=22215185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,971:0,51,255:23,0 chr1 22215186 . G . PASS END=22215188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 22215189 . C . PASS END=22215206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 22215207 . C . PASS END=22215211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 22216474 . C . PASS END=22216515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:32:0,96,1217:0,96,255:39,0 chr1 22216516 . C . PASS END=22216516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 22216517 . G . PASS END=22216634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:39:0,102,1523:0,106,255:40,0 chr1 22216920 . T . PASS END=22216978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:40:0,98,1368:0,98,255:40,0 chr1 22217078 . C . PASS END=22217107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1347:0,84,255:40,0 chr1 22217108 . G A, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.509;ReadPosRankSum=2.173;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,23,0:0.548,0.000:42:9,12,0:10,11,0:47:85,0,46,185,185,185:255,0,255:18,0:5.0000e+01,9.3708e-05,4.9358e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,7,12,11:10,9,15,8 chr1 22217109 . A . PASS END=22217145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:41:0,96,1466:0,96,255:40,0 chr1 22217146 . A . PASS END=22217187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1205:0,80,255:36,0 chr1 22217198 . G . PASS END=22217198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22222415 . C . PASS END=22222459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:33:0,82,1074:0,82,255:39,0 chr1 22222654 . G . PASS END=22222654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 22222668 . C . PASS END=22222671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,99,1460:0,99,255:40,0 chr1 22222672 . T . PASS END=22222672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1430:0,66,255:40,0 chr1 22222673 . G . PASS END=22222691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:92:46:0,92,1588:0,92,255:40,0 chr1 22222692 . T . PASS END=22222692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:76:52:0,76,1645:0,76,255:40,0 chr1 22222693 . G . PASS END=22222803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:39:0,101,1390:0,101,255:40,0 chr1 22222815 . C . PASS END=22222815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 22224819 . C . PASS END=22224819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 22224820 . C . PASS END=22224820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 22224821 . C . PASS END=22224821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 22224822 . C . PASS END=22224823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 22224824 . A . PASS END=22224824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 22224825 . C . PASS END=22224831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 22224832 . G . PASS END=22224832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:29,0 chr1 22224833 . C . PASS END=22224858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1141:0,90,255:37,0 chr1 22224859 . T . PASS END=22224859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 22224860 . C . PASS END=22225022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:38:0,88,1338:0,88,255:40,0 chr1 22225743 . G C, 176.42 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,13,0:0,30,0:126:214,129,0,1665,129,1665:255,129,0:0,0:1.7642e+02,1.2642e+02,0.0000e+00,4.5000e+02,1.6119e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,23:0,0,20,23 chr1 22227091 . T C, 206.04 PASS DP=53;MQ=249.73;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,27,0:0,26,0:156:244,159,0,2009,159,2009:255,159,0:0,0:2.0604e+02,1.5604e+02,0.0000e+00,4.5000e+02,1.9081e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,22:0,0,21,32 chr1 22263648 . C . PASS END=22263651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 22263652 . A . PASS END=22263677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 22263678 . C . PASS END=22263678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 22263679 . A . PASS END=22263688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 22263689 . C . PASS END=22263689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 22263690 . G . PASS END=22263710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 22303533 . A . PASS END=22303561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,146,255:40,0 chr1 22303562 . C . PASS END=22303575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,169,255:40,0 chr1 22304862 . C . PASS END=22304868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,111,1412:0,111,255:40,0 chr1 22304869 . C . PASS END=22304938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:31:0,83,1216:0,83,255:40,0 chr1 22304939 . C . PASS END=22304939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr1 22304940 . C . PASS END=22304942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 22304943 . G . PASS END=22304943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22304944 . G . PASS END=22304944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:25,0 chr1 22304945 . C . PASS END=22304946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 22304947 . G . PASS END=22304947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:25,0 chr1 22307317 . G . PASS END=22307332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,601:0,51,255:19,0 chr1 22307333 . A . PASS END=22307333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:17,0 chr1 22307334 . G . PASS END=22307339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,698:0,57,255:19,0 chr1 22307340 . C T, 38.72 PASS DP=20;MQ=97.89;MQRankSum=-2.103;ReadPosRankSum=-1.113;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,6,0:0.300,0.000:20:10,1,0:4,5,0:38:73,0,48,215,443,658:173,0,255:13,0:3.8717e+01,6.1613e-04,5.1251e+01,2.1459e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,5,1:6,8,0,6 chr1 22307341 . G . PASS END=22307348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,638:0,41,255:19,0 chr1 22307349 . C . PASS END=22307357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:22,0 chr1 22307358 . C G, 30.66 PASS DP=22;MQ=112.41;MQRankSum=-2.037;ReadPosRankSum=-0.862;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,5,0:0.227,0.000:22:11,1,0:6,4,0:31:65,0,49,179,571,750:128,0,255:17,0:3.0662e+01,3.7564e-03,5.2304e+01,1.7886e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,4,1:5,12,0,5 chr1 22307359 . T . PASS END=22307360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 22307361 . T . PASS END=22307361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 22307362 . G . PASS END=22307364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22307365 . G . PASS END=22307367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 22307368 . A . PASS END=22307385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 22307386 . T . PASS END=22307387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:20,0 chr1 22307388 . G . PASS END=22307395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 22307396 . C . PASS END=22307414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 22307531 . G . PASS END=22307537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 22307538 . C T, 146.32 PASS DP=33;MQ=219.36;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,14,0:0,19,0:96:184,99,0,1271,99,1271:255,99,0:0,0:1.4632e+02,9.6318e+01,0.0000e+00,4.5000e+02,1.3109e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,14:0,0,16,17 chr1 22307539 . G . PASS END=22307575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1157:0,93,255:38,0 chr1 22307576 . T . PASS END=22307665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:34:0,90,1293:0,94,255:40,0 chr1 22310187 . C . PASS END=22310189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr1 22310190 . T C, 42.94 PASS DP=25;MQ=40.85;MQRankSum=0.192;ReadPosRankSum=-0.137;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:6,5,0:8,6,0:41:78,0,41,393,472,865:255,0,255:14,0:4.2936e+01,3.7950e-04,4.4375e+01,3.9343e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,6,5:9,5,8,3 chr1 22310191 . G . PASS END=22310196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 22310197 . G . PASS END=22310205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:30,0 chr1 22310206 . A . PASS END=22310207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 22310208 . G . PASS END=22310209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22310210 . T . PASS END=22310210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:28,0 chr1 22310211 . C . PASS END=22310226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:36,0 chr1 22310227 . C . PASS END=22310261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:37:0,96,1353:0,96,255:40,0 chr1 22310262 . G C, 164.90 PASS DP=41;MQ=47.02;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,19,0:0,22,0:120:203,123,0,1590,123,1590:255,126,0:0,0:1.6490e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,22:0,0,23,18 chr1 22310263 . G . PASS END=22310297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1215:0,81,255:40,0 chr1 22310298 . C . PASS END=22310299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:66:35:0,66,1257:0,66,255:27,0 chr1 22310300 . T . PASS END=22310301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:31,0 chr1 22310302 . A . PASS END=22310302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr1 22310303 . C . PASS END=22310312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 22310313 . C . PASS END=22310313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr1 22310314 . C . PASS END=22310315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:29,0 chr1 22310316 . T . PASS END=22310316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:41:34:0,41,1171:0,41,255:21,0 chr1 22310317 . C . PASS END=22310319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,990:0,68,255:22,0 chr1 22310320 . T . PASS END=22310320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:22,0 chr1 22310321 . A . PASS END=22310323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,990:0,80,255:23,0 chr1 22310682 . C . PASS END=22310692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:13,0 chr1 22310693 . C . PASS END=22310704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 22310705 . C . PASS END=22310705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 22310706 . T . PASS END=22310719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,584:0,48,255:18,0 chr1 22310720 . C . PASS END=22310720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 22310721 . T . PASS END=22310724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 22310725 . G C, 48.63 PASS DP=19;MQ=155.38;MQRankSum=0.784;ReadPosRankSum=2.766;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:5,1,0:6,7,0:46:83,0,47,183,183,183:231,0,255:10,0:4.8627e+01,1.0303e-04,5.0000e+01,1.8340e+02,2.1817e+02,1.8641e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,5,4,4:6,5,3,5 chr1 22310726 . G . PASS END=22310729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,696:0,44,255:19,0 chr1 22310730 . T . PASS END=22310730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,580:0,27,255:17,0 chr1 22310731 . G . PASS END=22310732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22310733 . A . PASS END=22310735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:22,0 chr1 22310736 . A . PASS END=22310736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 22310737 . T . PASS END=22310765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,748:0,63,255:24,0 chr1 22310766 . G . PASS END=22310770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 22310771 . T . PASS END=22310777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 22310778 . A . PASS END=22310778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:20,0 chr1 22310779 . G . PASS END=22310779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 22310780 . A . PASS END=22310803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:18:0,46,668:0,46,255:19,0 chr1 22310804 . G . PASS END=22310804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 22310805 . A . PASS END=22310807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22310808 . T . PASS END=22310808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 22310809 . C . PASS END=22310810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22310811 . G A, 48.00 PASS DP=17;MQ=115.06;MQRankSum=-0.529;ReadPosRankSum=2.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:3,4,0:5,5,0:47:83,0,50,322,278,600:255,0,255:8,0:4.8000e+01,9.1120e-05,5.2874e+01,3.2178e+02,3.1279e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,5,4:4,4,6,3 chr1 22310812 . C . PASS END=22310814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 22310815 . C . PASS END=22310815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 22310816 . G . PASS END=22310823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 22310824 . T C, 93.16 PASS DP=16;MQ=106.59;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,7,0:0,9,0:45:131,48,0,620,48,620:255,51,0:0,0:9.3156e+01,4.5156e+01,1.3254e-04,4.5000e+02,7.9926e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,9:0,0,10,6 chr1 22313024 . G . PASS END=22313025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr1 22313026 . T . PASS END=22313026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 22313027 . G . PASS END=22313054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:32:0,96,1217:0,96,255:40,0 chr1 22313055 . C . PASS END=22313123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,138,255:40,0 chr1 22313124 . G . PASS END=22313147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,117,1755:0,127,255:40,0 chr1 22313148 . T . PASS END=22313148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:63:48:0,63,1290:0,63,255:38,0 chr1 22313149 . C . PASS END=22313160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,111,1562:0,111,255:40,0 chr1 22313161 . T C, 185.22 PASS DP=47;MQ=134.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,23,0:0,24,0:137:223,140,0,1689,140,1689:255,141,0:0,0:1.8522e+02,1.3662e+02,0.0000e+00,4.5000e+02,1.7139e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,29:0,0,24,23 chr1 22313162 . G . PASS END=22313176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:43:0,93,1395:0,125,255:40,0 chr1 22315755 . A . PASS END=22315765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,95,255:29,0 chr1 22315766 . C . PASS END=22315766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr1 22315767 . C . PASS END=22315772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 22324644 . A . PASS END=22324652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1119:0,82,255:37,0 chr1 22324653 . G . PASS END=22324653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 22324654 . G . PASS END=22324655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:36,0 chr1 22324656 . A . PASS END=22324656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:35,0 chr1 22324657 . A . PASS END=22324667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,108,1620:0,111,255:39,0 chr1 22324668 . G . PASS END=22324682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1402:0,101,255:39,0 chr1 22328168 . A . PASS END=22328190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,102,1488:0,107,255:40,0 chr1 22328191 . C . PASS END=22328210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:44:0,97,1629:0,97,255:40,0 chr1 22329496 . C . PASS END=22329508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,668:0,51,255:18,0 chr1 22329509 . C . PASS END=22329509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 22329510 . C . PASS END=22329522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr1 22329523 . A . PASS END=22329523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr1 22329524 . C . PASS END=22329524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22329525 . T . PASS END=22329525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:16,0 chr1 22329526 . C . PASS END=22329532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 22329533 . C . PASS END=22329533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 22329534 . C . PASS END=22329537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 22329538 . T . PASS END=22329538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:14,0 chr1 22329539 . T . PASS END=22329551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,630:0,40,255:15,0 chr1 22329552 . G . PASS END=22329552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 22329553 . A . PASS END=22329555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 22329556 . C . PASS END=22329556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 22329557 . G . PASS END=22329576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:10:0,30,357:0,30,255:12,0 chr1 22329577 . G . PASS END=22329581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 22331940 . G . PASS END=22331970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,126,255:40,0 chr1 22331971 . T . PASS END=22332007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,144,255:40,0 chr1 22332008 . T C, 9.12 DRAGENSnpHardQUAL DP=58;MQ=112.45;MQRankSum=-5.449;ReadPosRankSum=0.922;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,13,0:0.228,0.000:57:24,7,0:20,6,0:9:43,0,50,465,1386,1851:255,0,255:40,0:9.1231e+00,5.6693e-01,5.3567e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,23,3,10:23,21,7,6 chr1 22332009 . T . PASS END=22332037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,138,255:40,0 chr1 22332155 . G . PASS END=22332290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,110,1482:0,110,255:40,0 chr1 22332291 . T . PASS END=22332293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,159,255:40,0 chr1 22333371 . C . PASS END=22333376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 22333377 . C . PASS END=22333387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:30,0 chr1 22333388 . T . PASS END=22333388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr1 22333389 . C . PASS END=22333499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:30:0,87,1103:0,90,255:40,0 chr1 22333500 . T . PASS END=22333507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:35:0,72,1080:0,92,255:26,0 chr1 22333866 . C . PASS END=22333885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:21,0 chr1 22333886 . A . PASS END=22333886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 22333887 . A . PASS END=22333900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 22333901 . C . PASS END=22333911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 22333912 . G . PASS END=22333962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,815:0,66,255:25,0 chr1 22333963 . G . PASS END=22333963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 22333964 . A . PASS END=22333964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 22333965 . A . PASS END=22333965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 22333966 . A . PASS END=22333981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 22333982 . G . PASS END=22334008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 22336198 . G . PASS END=22336201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 22336202 . A . PASS END=22336204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:23,0 chr1 22336205 . C . PASS END=22336239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,986:0,81,255:37,0 chr1 22336240 . G . PASS END=22336276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1341:0,95,255:37,0 chr1 22336277 . C G, 160.90 PASS DP=38;MQ=177.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,23,0:0,15,0:111:199,114,0,1421,114,1428:255,114,0:0,0:1.6090e+02,1.1090e+02,0.0000e+00,4.5000e+02,1.4567e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,19:0,0,20,18 chr1 22336278 . C . PASS END=22336294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1366:0,84,255:38,0 chr1 22336295 . T . PASS END=22336295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:38,0 chr1 22336296 . C . PASS END=22336296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1474:0,120,255:40,0 chr1 22336297 . T . PASS END=22336297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:42:40:0,42,1259:0,42,255:37,0 chr1 22336298 . G . PASS END=22336314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:36:0,90,1350:0,98,255:39,0 chr1 22336315 . A . PASS END=22336321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,92,255:29,0 chr1 22336322 . T . PASS END=22336322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,987:0,63,255:27,0 chr1 22336323 . C . PASS END=22336331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 22336332 . C . PASS END=22336333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22336334 . T . PASS END=22336350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 22336631 . G . PASS END=22336639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 22338943 . A . PASS END=22338960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,657:0,41,255:18,0 chr1 22404972 . A . PASS END=22404973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 22404974 . G . PASS END=22404974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:34,0 chr1 22404975 . C . PASS END=22405076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:37:0,105,1424:0,111,255:40,0 chr1 22405199 . A . PASS END=22405202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,753:0,74,255:25,0 chr1 22405203 . T . PASS END=22405203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 22405204 . G . PASS END=22405212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,945:0,62,255:26,0 chr1 22405213 . T . PASS END=22405216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 22405217 . T . PASS END=22405217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 22405218 . A . PASS END=22405219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22405240 . C . PASS END=22405274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1186:0,93,255:40,0 chr1 22405275 . A . PASS END=22405275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:39,0 chr1 22405276 . G . PASS END=22405305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:44:0,83,1611:0,83,255:40,0 chr1 22405306 . T . PASS END=22405307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:42:51:0,42,1598:0,42,255:40,0 chr1 22405308 . C . PASS END=22405312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:51:0,101,1726:0,101,255:40,0 chr1 22405313 . G . PASS END=22405313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:76:53:0,76,1629:0,76,255:40,0 chr1 22405314 . A . PASS END=22405317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:53:0,109,1699:0,109,255:40,0 chr1 22405318 . G . PASS END=22405318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:49:55:0,49,1663:0,49,255:37,0 chr1 22405319 . A . PASS END=22405321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:95:54:0,95,1632:0,95,255:40,0 chr1 22405322 . C . PASS END=22405322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:51:54:0,51,1637:0,51,255:39,0 chr1 22405323 . T . PASS END=22405333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:84:53:0,84,1697:0,84,255:40,0 chr1 22405334 . G . PASS END=22405353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:50:0,81,1215:0,106,255:40,0 chr1 22405354 . T . PASS END=22405358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:69:48:0,69,1035:0,117,255:24,0 chr1 22405359 . T . PASS END=22405364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:42:42:0,42,630:0,68,255:18,0 chr1 22405365 . T . PASS END=22405374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:30:37:0,30,450:0,41,255:13,0 chr1 22408215 . G . PASS END=22408287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:65:0,120,1800:0,183,255:40,0 chr1 22412932 . G . PASS END=22413041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,103,1261:0,103,255:40,0 chr1 22413162 . T . PASS END=22413346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:84:36:0,84,1260:0,108,255:40,0 chr1 22413347 . T . PASS END=22413356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:28:0,63,945:0,68,255:21,0 chr1 22413357 . C . PASS END=22413374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 22416436 . A . PASS END=22416440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:40,0 chr1 22416441 . T . PASS END=22416441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:39,0 chr1 22416442 . C . PASS END=22416525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,109,1407:0,109,255:40,0 chr1 22417921 . A . PASS END=22417923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22417924 . G . PASS END=22417959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,825:0,69,255:26,0 chr1 22417960 . G . PASS END=22417963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22417964 . T . PASS END=22417976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1053:0,71,255:26,0 chr1 22417977 . A . PASS END=22417977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:25,0 chr1 22417978 . C . PASS END=22418000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,901:0,64,255:26,0 chr1 22418001 . G . PASS END=22418010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 22446543 . T . PASS END=22446543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 22446544 . C . PASS END=22446554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 22446555 . G . PASS END=22446580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 22446581 . G . PASS END=22446612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,491:0,42,255:15,0 chr1 22446613 . T . PASS END=22446613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 22446614 . T . PASS END=22446656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,499:0,45,255:19,0 chr1 22446657 . G . PASS END=22446657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22446658 . C . PASS END=22446658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 22446659 . C . PASS END=22446662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 22446663 . G . PASS END=22446663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 22446664 . C . PASS END=22446670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 22446671 . A . PASS END=22446671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 22446672 . C . PASS END=22446675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 22446676 . A . PASS END=22446676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 22446677 . G . PASS END=22446686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,939:0,72,255:25,0 chr1 22446687 . G . PASS END=22446687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 22446688 . T . PASS END=22446748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,878:0,61,255:26,0 chr1 22446749 . T . PASS END=22446749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 22446750 . G . PASS END=22446764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 22446765 . G . PASS END=22446766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 22446767 . C . PASS END=22446781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,809:0,66,255:23,0 chr1 22446782 . A . PASS END=22446782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 22446783 . G . PASS END=22446783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 22446784 . T . PASS END=22446784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:19,0 chr1 22446785 . A . PASS END=22446787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22446788 . C . PASS END=22446788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 22446789 . C . PASS END=22446796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,853:0,66,255:22,0 chr1 22446797 . C . PASS END=22446797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 22446798 . A . PASS END=22446799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 22446800 . C . PASS END=22446800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 22446801 . T . PASS END=22446822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 22446823 . T . PASS END=22446827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 22446828 . T . PASS END=22446829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 22446830 . G . PASS END=22446843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,692:0,46,255:19,0 chr1 22446844 . G . PASS END=22446852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 22446853 . A . PASS END=22446879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 22446880 . C . PASS END=22446880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 22446881 . C . PASS END=22446881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 22446882 . A . PASS END=22446882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 22446883 . T . PASS END=22446925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,621:0,41,255:18,0 chr1 22446926 . G . PASS END=22446937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 22446938 . A . PASS END=22446938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 22446939 . G . PASS END=22446951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,63,255:19,0 chr1 22446952 . T . PASS END=22446952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:18,0 chr1 22446953 . C . PASS END=22446955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 22446956 . A . PASS END=22446960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 22446961 . C . PASS END=22446962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22446963 . T . PASS END=22446963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 22446964 . G . PASS END=22446985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 22446986 . C . PASS END=22447010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 22447704 . C . PASS END=22447704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,645:0,16,255:18,0 chr1 22447705 . T . PASS END=22447705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22447706 . T . LowGQ END=22447706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,582:9,0,255:17,0 chr1 22447707 . C . PASS END=22447707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 22447708 . C . PASS END=22447710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:21,0 chr1 22447711 . C . PASS END=22447711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 22447712 . C . PASS END=22447712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 22447713 . G . PASS END=22447713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 22447714 . G . PASS END=22447714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr1 22447715 . C . PASS END=22447717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:24,0 chr1 22447718 . C . PASS END=22447718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 22447719 . A . PASS END=22447719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,764:0,33,255:23,0 chr1 22447720 . T . PASS END=22447721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,929:0,75,255:25,0 chr1 22447722 . G . PASS END=22447728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr1 22447729 . A . PASS END=22447729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,889:0,53,255:26,0 chr1 22447730 . G . PASS END=22447732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 22447733 . T . PASS END=22447733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:27,0 chr1 22447734 . C . PASS END=22447734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 22447735 . A . PASS END=22447736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 22447737 . G . PASS END=22447746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 22447747 . C . PASS END=22447747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:29,0 chr1 22447748 . T . PASS END=22447760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:92:31:0,92,977:0,92,255:32,0 chr1 22447761 . C . PASS END=22447761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:13:32:0,13,784:0,13,255:27,0 chr1 22447762 . T . PASS END=22447764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1134:0,96,255:32,0 chr1 22447765 . C . PASS END=22447765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,923:0,46,255:29,0 chr1 22447766 . T . PASS END=22447766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1225:0,96,255:32,0 chr1 22447767 . T . PASS END=22447767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:13:32:0,13,807:0,13,255:27,0 chr1 22447768 . C . PASS END=22447768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr1 22447769 . T . PASS END=22447769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:29:32:0,29,868:0,29,255:28,0 chr1 22447770 . C . PASS END=22447774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:95:32:0,95,996:0,95,255:32,0 chr1 22447775 . G . PASS END=22447775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,983:0,79,255:31,0 chr1 22447776 . C . PASS END=22447779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 22447780 . T . PASS END=22447780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,881:0,49,255:29,0 chr1 22447781 . C . PASS END=22447795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1035:0,82,255:34,0 chr1 22447796 . A . PASS END=22447796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:32,0 chr1 22447797 . G . PASS END=22447797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 22447798 . A . PASS END=22447798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:32,0 chr1 22447799 . A . PASS END=22447817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:33,0 chr1 22447818 . G . PASS END=22447846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 22447938 . C . PASS END=22447974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1233:0,89,255:33,0 chr1 22447975 . G . PASS END=22447975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 22447976 . C . PASS END=22448047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1197:0,92,255:37,0 chr1 22448048 . A . PASS END=22448049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 22448050 . G . PASS END=22448050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr1 22448051 . A . PASS END=22448069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 22453760 . T . PASS END=22453768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22453769 . C . PASS END=22453777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 22453778 . T . PASS END=22453778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr1 22453779 . G . PASS END=22453802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,62,255:25,0 chr1 22453803 . T . PASS END=22453803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 22453804 . T . PASS END=22453804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 22453805 . C . PASS END=22453817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:70:25:0,70,939:0,70,255:27,0 chr1 22453818 . T . PASS END=22453833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1070:0,87,255:29,0 chr1 22453834 . T . PASS END=22453834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22453835 . G . PASS END=22453841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1210:0,86,255:32,0 chr1 22453842 . T C, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.345;ReadPosRankSum=1.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,24,0:0.727,0.000:33:3,12,0:6,12,0:38:85,0,35,821,314,1135:255,0,255:9,0:5.0001e+01,7.4454e-04,3.7920e+01,4.5000e+02,3.4864e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,3,12,12:4,5,12,12 chr1 22453843 . G . PASS END=22453851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1235:0,102,255:34,0 chr1 22453852 . C . PASS END=22453852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 22453853 . G . PASS END=22453860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:33,0 chr1 22453861 . C . PASS END=22453861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:28,0 chr1 22453862 . A . PASS END=22453872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,83,255:28,0 chr1 22453873 . G . PASS END=22453873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22453874 . C . PASS END=22453879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 22453880 . G . PASS END=22453882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 22453883 . A . PASS END=22453883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:29,0 chr1 22453884 . C . PASS END=22453884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,911:0,46,255:28,0 chr1 22453885 . C . PASS END=22453893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1115:0,80,255:31,0 chr1 22453894 . T . PASS END=22453894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:29,0 chr1 22453895 . G . PASS END=22453903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 22453904 . A . PASS END=22453904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 22453905 . G . PASS END=22453908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 22453909 . T . PASS END=22453909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 22453910 . C . PASS END=22453910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22453911 . T . PASS END=22453911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 22453912 . C . PASS END=22453923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:29,0 chr1 22453924 . T . PASS END=22453924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 22453925 . T . PASS END=22453930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1033:0,87,255:29,0 chr1 22453931 . C . PASS END=22453937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,986:0,68,255:26,0 chr1 22453938 . T . PASS END=22453954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 22453955 . T . PASS END=22453955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 22453956 . C . PASS END=22453957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 22453958 . A . PASS END=22453974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,49,255:17,0 chr1 22456109 . C . PASS END=22456112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 22456113 . C . PASS END=22456118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22456119 . C . PASS END=22456119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 22456120 . A . PASS END=22456126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 22456127 . C . PASS END=22456127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 22456128 . G . PASS END=22456144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:16,0 chr1 22456145 . C . PASS END=22456145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 22456146 . G . PASS END=22456148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:17,0 chr1 22456149 . T . PASS END=22456149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 22456150 . G . PASS END=22456166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:17,0 chr1 22456167 . C . PASS END=22456168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 22456169 . G . PASS END=22456175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 22456176 . G . PASS END=22456176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 22456177 . A . PASS END=22456178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22456179 . C . PASS END=22456179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 22456180 . T . PASS END=22456180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 22456181 . G . PASS END=22456182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 22456183 . T . PASS END=22456183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 22456184 . A . PASS END=22456187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 22456188 . G . PASS END=22456195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 22456196 . C . PASS END=22456196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 22456197 . A . PASS END=22456197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 22456198 . A . PASS END=22456207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,831:0,61,255:26,0 chr1 22456208 . G . PASS END=22456218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:30,0 chr1 22456219 . C . PASS END=22456219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 22456220 . G . PASS END=22456224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr1 22456225 . G . PASS END=22456225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 22456226 . A . PASS END=22456233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 22456234 . A . PASS END=22456234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:29,0 chr1 22456235 . C . PASS END=22456344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:33:0,83,1172:0,83,255:40,0 chr1 22467151 . C . PASS END=22467153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,742:0,58,255:21,0 chr1 22467154 . G . PASS END=22467160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,933:0,68,255:26,0 chr1 22467161 . G . PASS END=22467263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,980:0,80,255:40,0 chr1 22467264 . C . PASS END=22467264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:35,0 chr1 22467265 . G . PASS END=22467285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,99,255:36,0 chr1 22467286 . T . PASS END=22467289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:25,0 chr1 22467290 . T . PASS END=22467293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:51:27:0,51,765:0,65,255:17,0 chr1 22469339 . A . PASS END=22469359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 22469360 . G . PASS END=22469367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 22469368 . G . PASS END=22469387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,333:0,27,255:9,0 chr1 22469388 . G . PASS END=22469392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 22469393 . C . PASS END=22469396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 22469397 . G . PASS END=22469398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 22469399 . C . PASS END=22469402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 22469403 . A . PASS END=22469404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 22469405 . C . PASS END=22469405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:6,0 chr1 22469406 . G . PASS END=22469409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 22469410 . A . PASS END=22469415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 22816442 . A . PASS END=22816449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 22816450 . C . PASS END=22816450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 22816451 . C . PASS END=22816464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 22816465 . G . PASS END=22816478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:17,0 chr1 22816479 . A . PASS END=22816479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,564:0,35,255:16,0 chr1 22816480 . G . PASS END=22816483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,723:0,63,255:24,0 chr1 22816484 . T . PASS END=22816484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 22816485 . A . PASS END=22816485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 22816486 . C . PASS END=22816486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 22816487 . A . PASS END=22816487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 22816488 . C . PASS END=22816488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 22816489 . T . PASS END=22816491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,878:0,61,255:25,0 chr1 22816492 . G . PASS END=22816492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:28,0 chr1 22816493 . T . PASS END=22816493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 22816494 . G . PASS END=22816494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 22816495 . C . PASS END=22816531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1034:0,83,255:34,0 chr1 22816532 . G . PASS END=22816532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr1 22816533 . G . PASS END=22816538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr1 22816539 . T . PASS END=22816539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 22816540 . T . PASS END=22816540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 22816541 . T . PASS END=22816541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 22816542 . A . PASS END=22816608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1149:0,82,255:33,0 chr1 22816609 . A . PASS END=22816609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:31,0 chr1 22816610 . G . PASS END=22816613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:31,0 chr1 22816614 . C . PASS END=22816614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:28,0 chr1 22816615 . C . PASS END=22816626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:31,0 chr1 22816627 . T . PASS END=22816630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 22816631 . T . PASS END=22816637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 22816638 . T . PASS END=22816642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 22816643 . C . PASS END=22816654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 22816655 . G . PASS END=22816655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 22816656 . C . PASS END=22816711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1185:0,80,255:35,0 chr1 22816712 . T . PASS END=22816712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:33,0 chr1 22816713 . C . PASS END=22816748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,92,255:35,0 chr1 22816749 . T . PASS END=22816749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1105:0,63,255:31,0 chr1 22816750 . T . PASS END=22816762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:34,0 chr1 22816763 . A . PASS END=22816763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:33,0 chr1 22816764 . G . PASS END=22816825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:34,0 chr1 22816826 . G . PASS END=22816826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 22816827 . T . PASS END=22816895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1183:0,86,255:36,0 chr1 22816896 . A . PASS END=22816896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:31,0 chr1 22816897 . A . PASS END=22816974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1194:0,93,255:36,0 chr1 22816975 . A . PASS END=22816975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 22816976 . G . PASS END=22816981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 22816982 . T . PASS END=22816983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 22816984 . A . PASS END=22816984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:24,0 chr1 22816985 . G . PASS END=22816994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,74,255:24,0 chr1 22816995 . A . PASS END=22816995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr1 22816996 . G . PASS END=22816997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22816998 . T . PASS END=22816998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 22816999 . G . PASS END=22816999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22817000 . A . PASS END=22817000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 22817001 . G . PASS END=22817006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:24,0 chr1 22817007 . A . PASS END=22817007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 22817008 . T . PASS END=22817027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,787:0,64,255:26,0 chr1 22817028 . G . PASS END=22817037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:29,0 chr1 22817038 . T . PASS END=22817045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22817046 . C . PASS END=22817046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22817047 . C . PASS END=22817081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 22817082 . C . PASS END=22817082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22817083 . C . PASS END=22817095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,945:0,65,255:25,0 chr1 22817096 . G . PASS END=22817096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 22817097 . T . PASS END=22817106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 22817107 . T . PASS END=22817107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 22817108 . A . PASS END=22817114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 22817115 . C . PASS END=22817115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 22817116 . A . PASS END=22817116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22817117 . A . PASS END=22817117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 22817118 . A . PASS END=22817119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22817120 . A . PASS END=22817120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr1 22817121 . A . PASS END=22817121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22817122 . G . PASS END=22817123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,799:0,58,255:23,0 chr1 22817124 . C . PASS END=22817126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 22817127 . G . PASS END=22817127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 22817128 . C . PASS END=22817128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 22817129 . A . PASS END=22817129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 22817130 . C . PASS END=22817138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 22817893 . G . PASS END=22818026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:43:0,96,1440:0,113,255:40,0 chr1 22827985 . A . PASS END=22827996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1305:0,108,255:38,0 chr1 22827997 . T . PASS END=22827997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 22827998 . G . PASS END=22828173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1215:0,93,255:40,1 chr1 22828174 . A . PASS END=22828177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 22828792 . G . PASS END=22828800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,945:0,62,255:26,0 chr1 22828801 . A . PASS END=22828801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 22828802 . G . PASS END=22828808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 22828809 . A . PASS END=22828809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 22828810 . A . PASS END=22828815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:28:0,84,1086:0,84,255:33,0 chr1 22828816 . T . PASS END=22828816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr1 22828817 . G . PASS END=22828918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1213:0,89,255:40,0 chr1 22828919 . T . PASS END=22828930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr1 22828931 . A . PASS END=22828934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:25,0 chr1 22832542 . G . PASS END=22832705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,114,1457:0,114,255:40,0 chr1 22832706 . G . PASS END=22832731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,108,255:37,0 chr1 22832732 . C . PASS END=22832734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:22,0 chr1 22834494 . T . PASS END=22834630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:90:41:0,90,1471:0,90,255:40,0 chr1 22835023 . G . PASS END=22835023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 22835024 . T . PASS END=22835024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 22835025 . C . PASS END=22835042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:26,0 chr1 22835043 . A . PASS END=22835049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 22835050 . T . PASS END=22835050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:29,0 chr1 22835051 . C . PASS END=22835066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1096:0,86,255:34,0 chr1 22835067 . C . PASS END=22835067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr1 22835068 . A . PASS END=22835070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1255:0,89,255:34,0 chr1 22835071 . T . PASS END=22835071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1093:0,72,255:32,0 chr1 22835072 . C . PASS END=22835145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1118:0,80,255:35,0 chr1 22835146 . G . PASS END=22835147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1080:0,66,255:27,0 chr1 22835148 . G . PASS END=22835150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:27,0 chr1 22835151 . A . PASS END=22835151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:25,0 chr1 22835152 . A . PASS END=22835152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22835153 . A . PASS END=22835153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 22835154 . G . PASS END=22835154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22835155 . A . PASS END=22835155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 22835156 . C . PASS END=22835158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 22835159 . G . PASS END=22835159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 22835160 . T . PASS END=22835160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22835161 . C . PASS END=22835163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22835164 . T . PASS END=22835164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22835165 . T . PASS END=22835166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1147:0,77,255:26,0 chr1 22835167 . G . PASS END=22835167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,986:0,38,255:24,0 chr1 22835168 . A . PASS END=22835183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:25,0 chr1 22835184 . A . PASS END=22835185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:19,0 chr1 22835186 . T . PASS END=22835186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:20,0 chr1 22835187 . A . PASS END=22835187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 22835188 . C . PASS END=22835189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:20,0 chr1 22835190 . A . PASS END=22835190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22835191 . A . PASS END=22835215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr1 22835216 . T . PASS END=22835216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 22835217 . C . PASS END=22835217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22835218 . C . PASS END=22835218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 22835219 . G . PASS END=22835223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 22835224 . G . PASS END=22835224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 22835593 . T . PASS END=22835598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:23,0 chr1 22835599 . C . PASS END=22835639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:33:0,95,1233:0,95,255:40,0 chr1 22835640 . C . PASS END=22835676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:43:0,93,1438:0,93,255:40,0 chr1 22835677 . A G, 179.43 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,22,0:0,22,0:129:217,132,0,1697,132,1697:255,132,0:0,0:1.7943e+02,1.2943e+02,0.0000e+00,4.5000e+02,1.6420e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,20:0,0,26,18 chr1 22835678 . C . PASS END=22835714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:40,0 chr1 22835715 . A . PASS END=22835715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr1 22835716 . C . PASS END=22835716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22835717 . T . PASS END=22835726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:25,0 chr1 22836618 . A . PASS END=22836719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:52:0,120,1800:0,127,255:40,0 chr1 22837672 . A . PASS END=22837674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:24,0 chr1 22837675 . C . PASS END=22837675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:24,0 chr1 22837676 . T . PASS END=22837676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 22837677 . G . PASS END=22837680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 22837681 . A . PASS END=22837683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 22837684 . C . PASS END=22837684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 22837685 . C . PASS END=22837685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22837686 . C . PASS END=22837686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22837687 . T . PASS END=22837687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 22837688 . C . PASS END=22837688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22837689 . T . PASS END=22837689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,984:0,35,255:28,0 chr1 22837690 . G . PASS END=22837692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 22837693 . A . PASS END=22837693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1007:0,60,255:28,0 chr1 22837694 . C . PASS END=22837694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 22837695 . A . PASS END=22837695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:31,0 chr1 22837696 . G . PASS END=22837715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:34,0 chr1 22837716 . G . PASS END=22837716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 22837717 . A . PASS END=22837717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1177:0,55,255:27,0 chr1 22837718 . G . PASS END=22837783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1179:0,91,255:37,0 chr1 22837784 . G . PASS END=22837784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 22837785 . T . PASS END=22837786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 22837787 . T . PASS END=22837787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:27,0 chr1 22837788 . C . PASS END=22837792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:30,0 chr1 22837793 . A . PASS END=22837793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1094:0,52,255:28,0 chr1 22837794 . A . PASS END=22837794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 22837795 . T . PASS END=22837795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 22837796 . C . PASS END=22837801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 22837802 . C . PASS END=22837802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 22837803 . A . PASS END=22837803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 22837804 . G . PASS END=22837806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 22837807 . C . PASS END=22837807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22837808 . T . PASS END=22837808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:25,0 chr1 22837809 . G . PASS END=22837811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22837812 . G . PASS END=22837813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1017:0,73,255:27,0 chr1 22837814 . C . PASS END=22837816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22837817 . T . PASS END=22837840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,793:0,61,255:25,0 chr1 22838169 . G . PASS END=22838550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:33:0,81,1202:0,81,255:40,0 chr1 22838551 . C . PASS END=22838551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1737:0,78,255:40,0 chr1 22838552 . G . PASS END=22838559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:48:0,89,1660:0,89,255:40,0 chr1 22838560 . C . PASS END=22838560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1674:0,70,255:40,3 chr1 22838561 . A . PASS END=22838563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:49:51:0,49,1599:0,49,255:40,3 chr1 22838564 . A . PASS END=22838612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:91:36:0,91,1154:0,91,255:40,0 chr1 22838613 . T . PASS END=22838613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:30,0 chr1 22838614 . T . PASS END=22838618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:35:0,90,1292:0,92,255:33,0 chr1 22838619 . A . PASS END=22838627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,1035:0,66,255:28,0 chr1 22839417 . G . PASS END=22839419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr1 22839420 . T . PASS END=22839420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 22839421 . G . PASS END=22839421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 22839422 . C . PASS END=22839434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,745:0,60,255:26,0 chr1 22839435 . T . PASS END=22839454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:29,0 chr1 22839455 . A . PASS END=22839455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:27,0 chr1 22839456 . A . PASS END=22839472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1111:0,87,255:31,0 chr1 22839473 . G . PASS END=22839473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 22839474 . A . PASS END=22839562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:35,0 chr1 22839563 . C . PASS END=22839583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr1 22839584 . T . PASS END=22839584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 22839585 . C . PASS END=22839585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 22839586 . C . PASS END=22839586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 22839587 . G . PASS END=22839587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 22839588 . C . PASS END=22839588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 22839589 . C . PASS END=22839589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22839590 . C . PASS END=22839595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 22839596 . T . PASS END=22839596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:18,0 chr1 22839597 . A . PASS END=22839600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22839601 . C . PASS END=22839602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 22839603 . C . PASS END=22839623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 22843793 . G . PASS END=22843798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 22843799 . T . PASS END=22843828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,807:0,61,255:26,0 chr1 22843829 . T . PASS END=22843832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 22843833 . C . PASS END=22843837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,970:0,78,255:26,0 chr1 22843838 . C . PASS END=22843841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22843842 . T . PASS END=22843842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:27,0 chr1 22843843 . G . PASS END=22843845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 22843846 . C . PASS END=22843847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 22843848 . G . PASS END=22843848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22843849 . T . PASS END=22843849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 22843850 . C . PASS END=22843851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22843852 . C . PASS END=22843853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1033:0,73,255:26,0 chr1 22843854 . C . PASS END=22843865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 22843866 . C . PASS END=22843866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 22843867 . C . PASS END=22843873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 22843874 . G . PASS END=22843875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22843876 . G . PASS END=22843877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22843878 . C . PASS END=22843900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1014:0,68,255:26,0 chr1 22843901 . G . PASS END=22843902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 22843903 . G . PASS END=22843903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 22843904 . G . PASS END=22843904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 22843905 . C . PASS END=22843911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr1 22843912 . T . PASS END=22843912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 22843913 . T . PASS END=22843913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 22843914 . C . PASS END=22843914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 22843915 . C . PASS END=22843937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr1 22843938 . C . PASS END=22843957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,47,255:19,0 chr1 22846554 . A . PASS END=22846554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr1 22846555 . C . PASS END=22846555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 22846556 . A . PASS END=22846617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1102:0,83,255:35,0 chr1 22846618 . G . PASS END=22846618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr1 22846619 . A . PASS END=22846644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1133:0,92,255:34,0 chr1 22846645 . A . PASS END=22846645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:28,0 chr1 22846646 . G . PASS END=22846671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:32,0 chr1 22846672 . G . PASS END=22846697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1133:0,82,255:31,0 chr1 22846698 . T . PASS END=22846708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 22846709 . G A, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:84:172,87,0,1116,87,1116:255,87,0:0,0:1.3428e+02,8.4279e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,15:0,0,16,13 chr1 22846710 . T . PASS END=22846740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,900:0,72,255:26,0 chr1 22846741 . C . PASS END=22846741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 22846742 . T . PASS END=22846746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 22846747 . G . PASS END=22846747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 22846748 . A . PASS END=22846748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:20,0 chr1 22846749 . T . PASS END=22846749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 22846750 . C . PASS END=22846750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 22846751 . T . PASS END=22846768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:17:0,48,659:0,50,255:19,0 chr1 22847989 . C . PASS END=22848010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:30:0,87,1002:0,88,255:37,0 chr1 22848011 . A . PASS END=22848011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1334:0,78,255:36,0 chr1 22848012 . C . PASS END=22848151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,105,1520:0,113,255:40,0 chr1 22848870 . A . PASS END=22848877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,986:0,78,255:26,0 chr1 22848878 . T . PASS END=22848880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 22848881 . C . PASS END=22848883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22848884 . G . PASS END=22848884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22848885 . A . PASS END=22848885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1054:0,60,255:28,0 chr1 22848886 . A . PASS END=22848956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:30:0,87,1111:0,90,255:40,0 chr1 22850711 . G . PASS END=22850712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr1 22850713 . T . PASS END=22850713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 22850714 . C . PASS END=22850721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,925:0,75,255:25,0 chr1 22850722 . T . PASS END=22850722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,837:0,44,255:22,0 chr1 22850723 . T . PASS END=22850725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 22850726 . G . PASS END=22850726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 22850727 . G . PASS END=22850727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22850728 . T . PASS END=22850728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22850729 . G . PASS END=22850729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 22850730 . C . PASS END=22850733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 22850734 . T . PASS END=22850734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 22850735 . A . PASS END=22850742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 22850743 . G . PASS END=22850743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 22850744 . C . PASS END=22850750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 22850751 . C . PASS END=22850754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr1 22850755 . T . PASS END=22850763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 22850764 . G . PASS END=22850777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 22850778 . T . PASS END=22850822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1125:0,83,255:39,0 chr1 22850823 . T . PASS END=22850823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1296:0,73,255:38,0 chr1 22850824 . G . PASS END=22850853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1319:0,87,255:39,0 chr1 22850854 . G . PASS END=22850854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr1 22850855 . C . PASS END=22850880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1061:0,93,255:33,0 chr1 22850881 . G . PASS END=22850916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,853:0,69,255:26,0 chr1 22850917 . G . PASS END=22850917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 22850918 . C . PASS END=22850923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22850924 . C . PASS END=22850937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr1 22852695 . G . PASS END=22852697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 22852698 . A . PASS END=22852698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 22852699 . T . PASS END=22852714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,901:0,75,255:25,0 chr1 22852715 . G C, 49.19 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=3.476;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:6,4,0:8,7,0:48:84,0,50,365,472,837:255,0,255:14,0:4.9191e+01,7.4034e-05,5.3000e+01,3.6461e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,4,7:7,7,9,2 chr1 22852716 . G . PASS END=22852722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,923:0,62,255:26,0 chr1 22852723 . C . PASS END=22852731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 22852732 . A . PASS END=22852732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 22852733 . G . PASS END=22852734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 22852735 . T . PASS END=22852735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:26,0 chr1 22852736 . G . PASS END=22852741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 22852742 . T . PASS END=22852742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 22852743 . T . PASS END=22852743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:28,0 chr1 22852744 . T . PASS END=22852744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 22852745 . G . PASS END=22852745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22852746 . G . PASS END=22852749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22852750 . A . PASS END=22852752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 22852753 . C . PASS END=22852754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 22852755 . C . PASS END=22852756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1108:0,74,255:28,0 chr1 22852757 . G . PASS END=22852775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1058:0,80,255:32,0 chr1 22852776 . T . PASS END=22852776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,916:0,79,255:28,0 chr1 22852777 . T . PASS END=22852791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:31,0 chr1 22852792 . A . PASS END=22852792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:28,0 chr1 22852793 . T . PASS END=22852795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 22852796 . T . PASS END=22852796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 22852797 . C . PASS END=22852799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 22852800 . G . PASS END=22852800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:26,0 chr1 22852801 . C . PASS END=22852807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 22852808 . G . PASS END=22852809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,89,255:29,0 chr1 22852810 . C . PASS END=22852810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:27,0 chr1 22852811 . C . PASS END=22852813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr1 22852814 . C . PASS END=22852814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:28,0 chr1 22852815 . T . PASS END=22852827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 22852828 . C . PASS END=22852831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,1035:0,60,255:26,0 chr1 22852832 . G . PASS END=22852833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:51:30:0,51,978:0,51,255:22,0 chr1 22852834 . C . PASS END=22852850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:23,0 chr1 22852851 . G . PASS END=22852851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 22852852 . A . PASS END=22852865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 22852866 . C . PASS END=22852889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,765:0,50,255:19,0 chr1 22890129 . A . LowDepth;LowGQ END=22890222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 22895782 . T . PASS END=22895783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 22895784 . A . PASS END=22895784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 22895785 . A . PASS END=22895841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,568:0,51,255:17,0 chr1 22895842 . A . PASS END=22895846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 22902710 . T . PASS END=22902714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,101,1372:0,101,255:39,0 chr1 22902715 . C . PASS END=22902715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:37,0 chr1 22902716 . T . PASS END=22902828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:37:0,83,1202:0,83,255:40,0 chr1 22902829 . C . PASS END=22902829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1239:0,61,255:33,0 chr1 22902830 . G . PASS END=22902830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1324:0,92,255:32,0 chr1 22902831 . C . PASS END=22902831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:33,0 chr1 22902832 . C . PASS END=22902842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,91,255:33,0 chr1 22902843 . A . PASS END=22902843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:27,0 chr1 22902844 . T . PASS END=22902844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,89,255:28,0 chr1 22902845 . G . PASS END=22902845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:28,0 chr1 22902846 . C . PASS END=22902846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 22902847 . T . PASS END=22902847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:28,0 chr1 22902848 . G . PASS END=22902848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 22902849 . A . PASS END=22902854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:31:0,63,1054:0,63,255:26,0 chr1 22902855 . A . PASS END=22902880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1113:0,85,255:29,0 chr1 22902881 . A . PASS END=22902886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 22902887 . G . PASS END=22902901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1100:0,87,255:29,0 chr1 22902902 . T . PASS END=22902903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 22902904 . C . PASS END=22902909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 22902910 . G . PASS END=22902921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr1 22902922 . C . PASS END=22902929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1169:0,80,255:30,0 chr1 22902930 . T . PASS END=22902931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 22902932 . G . PASS END=22902942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr1 22902943 . C . PASS END=22902951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 22902952 . G . PASS END=22902957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1161:0,80,255:30,0 chr1 22902958 . C . PASS END=22902958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 22902959 . A . PASS END=22902967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:31,0 chr1 22902968 . A . PASS END=22902968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 22902969 . G . PASS END=22902974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1133:0,93,255:31,0 chr1 22902975 . T . PASS END=22902975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 22902976 . C . PASS END=22902978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 22902979 . C . PASS END=22902979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 22902980 . A . PASS END=22902988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 22902989 . A . PASS END=22902989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:27,0 chr1 22902990 . C . PASS END=22902995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 22902996 . C . PASS END=22902996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 22902997 . G . PASS END=22903008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr1 22903009 . C . PASS END=22903009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 22903010 . T . PASS END=22903014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 22903015 . A . PASS END=22903016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 22903017 . G . PASS END=22903019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22903020 . C . PASS END=22903020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 22903021 . C . PASS END=22903030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 22903031 . G . PASS END=22903031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 22903032 . T . PASS END=22903036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22903037 . C . PASS END=22903037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:26,0 chr1 22903038 . G . PASS END=22903038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22903039 . T . PASS END=22903039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,985:0,73,255:28,0 chr1 22903040 . C . PASS END=22903042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr1 22903043 . A . PASS END=22903044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 22903045 . G . PASS END=22903061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1027:0,83,255:32,0 chr1 22903062 . G . PASS END=22903064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr1 22903065 . G . PASS END=22903102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1119:0,90,255:32,0 chr1 22903103 . T . PASS END=22903103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 22903104 . T . PASS END=22903106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 22903107 . A . PASS END=22903115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 22903116 . G . PASS END=22903119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 22903120 . C . PASS END=22903122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22903123 . C . PASS END=22903124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22903125 . T . PASS END=22903125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:24,0 chr1 22903126 . G . PASS END=22903139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1061:0,71,255:26,0 chr1 22903140 . T . PASS END=22903142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 22903143 . G . PASS END=22903143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 22903144 . C . PASS END=22903144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 22903145 . A . PASS END=22903146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 22903147 . C . PASS END=22903147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22903148 . T . PASS END=22903148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22903149 . A . PASS END=22903149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:25,0 chr1 22903150 . C . PASS END=22903150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22903151 . T . PASS END=22903151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 22903152 . A . PASS END=22903152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22903153 . T . PASS END=22903153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:26,0 chr1 22903154 . A . PASS END=22903155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22903156 . G . PASS END=22903156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22903157 . A . PASS END=22903158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 22903159 . G . PASS END=22903159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:25,0 chr1 22903160 . T . PASS END=22903160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 22903161 . G . PASS END=22903163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 22903164 . C . PASS END=22903168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 22903169 . A . PASS END=22903170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22903171 . G . PASS END=22903174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 22903175 . C . PASS END=22903175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:25,0 chr1 22903176 . G . PASS END=22903183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,998:0,68,255:26,0 chr1 22903184 . G . PASS END=22903184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:24,0 chr1 22903185 . C . PASS END=22903211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,937:0,62,255:26,0 chr1 22903212 . C . PASS END=22903212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 22903213 . C . PASS END=22903217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,847:0,69,255:23,0 chr1 22903218 . C . PASS END=22903218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 22903219 . G . PASS END=22903223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 22903224 . C . PASS END=22903224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 22903225 . A . PASS END=22903227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 22903228 . G . PASS END=22903230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22903231 . G . PASS END=22903231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 22903232 . G . PASS END=22903244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1133:0,84,255:30,0 chr1 22903245 . A . PASS END=22903246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 22903247 . T . PASS END=22903335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:33,0 chr1 22903336 . C . PASS END=22903336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:28,0 chr1 22903337 . A . PASS END=22903345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 22903346 . T . PASS END=22903346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 22903347 . A . PASS END=22903362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:28,0 chr1 22903363 . T . PASS END=22903373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:25,0 chr1 22912973 . C . PASS END=22912975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 22912976 . G . PASS END=22912976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 22912977 . T . PASS END=22912982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 22912983 . G . PASS END=22912983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 22912984 . G . PASS END=22913007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,876:0,72,255:26,0 chr1 22913008 . G . PASS END=22913009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 22913010 . C . PASS END=22913010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,922:0,7,255:26,0 chr1 22913011 . C . PASS END=22913011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 22913012 . A . PASS END=22913017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:30,0 chr1 22913018 . G . PASS END=22913018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 22913019 . T . PASS END=22913027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 22913028 . C . PASS END=22913028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 22913029 . C . PASS END=22913062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:32,0 chr1 22913063 . A . PASS END=22913064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 22913065 . G . PASS END=22913080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 22913081 . T . PASS END=22913092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:22,0 chr1 22913093 . G . PASS END=22913093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 22913094 . T . PASS END=22913094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22913095 . G . PASS END=22913115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:17,0 chr1 22913116 . T . PASS END=22913117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 22913118 . A . PASS END=22913128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 22915364 . G . PASS END=22915369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:15,0 chr1 22915370 . C . PASS END=22915370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 22915371 . C . PASS END=22915386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 22915387 . C . PASS END=22915388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 22915389 . G . PASS END=22915409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,592:0,48,255:17,0 chr1 22915410 . A . PASS END=22915410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 22915411 . T . PASS END=22915416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 22915417 . A . PASS END=22915417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 22915418 . C . PASS END=22915429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:15,0 chr1 22915430 . C . PASS END=22915430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 22915431 . C . PASS END=22915440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 22915441 . G . PASS END=22915441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22915442 . A . PASS END=22915442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 22915443 . C . PASS END=22915452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 22915453 . C . PASS END=22915476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 22915477 . G A, 0.01 DRAGENSnpHardQUAL DP=11;MQ=250.00;MQRankSum=1.423;ReadPosRankSum=-1.739;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:3,0,0:7,1,0:29:6,0,50,36,358,393:6,0,255:10,0:5.3288e-03,2.9115e+01,8.2115e+01,6.4873e+01,4.2152e+02,4.2550e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,0,1:6,4,1,0 chr1 22915478 . T . PASS END=22915513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 22915514 . A . PASS END=22915570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 22915571 . G . PASS END=22915573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 22915574 . T . PASS END=22915574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 22915575 . G . PASS END=22915625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:19,0 chr1 22915626 . C . PASS END=22915633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 22915634 . G . PASS END=22915663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 22915664 . G . PASS END=22915668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22915669 . G . PASS END=22915715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 22915716 . C . PASS END=22915730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:18,0 chr1 22915731 . T . PASS END=22915731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 22915732 . G . PASS END=22915746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 22915747 . C . PASS END=22915749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 22915750 . G . PASS END=22915752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:17,0 chr1 22915753 . T C, 48.25 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=1.042;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,8,0:0.400,0.000:20:7,5,0:5,3,0:47:83,0,50,286,427,713:250,0,255:11,0:4.8252e+01,8.6719e-05,5.3000e+01,2.8613e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,4,4:6,6,5,3 chr1 22915754 . C . PASS END=22915774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,666:0,44,255:17,0 chr1 22915775 . G . PASS END=22915775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 22915776 . C . PASS END=22915780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 22915781 . C . PASS END=22915785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 22915786 . G . PASS END=22915788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22915789 . G . PASS END=22915790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22915791 . G . PASS END=22915810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 22915811 . T . PASS END=22915866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:13,0 chr1 22915867 . C . PASS END=22915872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 22919819 . C . PASS END=22919822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 22919823 . G . PASS END=22919838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:15,0 chr1 22919839 . A . PASS END=22919839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 22919840 . T . PASS END=22919866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:19,0 chr1 22919867 . G . PASS END=22919891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 22919892 . C . PASS END=22919892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 22919893 . G . PASS END=22919895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 22919896 . C . PASS END=22919896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 22919897 . A . PASS END=22919903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 22919904 . C T, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=2.646;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:4,3,0:4,6,0:48:85,0,50,322,286,608:255,0,255:7,0:5.0000e+01,6.5751e-05,5.2874e+01,3.2181e+02,3.2090e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,6,3:5,3,4,5 chr1 22919905 . G . PASS END=22919941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,604:0,48,255:17,0 chr1 22919942 . A . PASS END=22919943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 22920017 . G . PASS END=22920025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 22920026 . A . PASS END=22920090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:34,0 chr1 22920091 . C . PASS END=22920091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 22920092 . A . PASS END=22920148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1213:0,84,255:36,0 chr1 22920149 . C . PASS END=22920174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 22920175 . A . PASS END=22920175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 22920176 . C . PASS END=22920179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 22921723 . G . PASS END=22921730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:18,0 chr1 22921731 . T . PASS END=22921732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 22921733 . T . PASS END=22921735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 22921736 . C . PASS END=22921766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 22921767 . C . PASS END=22921767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 22921768 . T . PASS END=22921793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 22921794 . C . PASS END=22921794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:19,0 chr1 22921795 . T . PASS END=22921795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22921796 . C . PASS END=22921814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,751:0,47,255:19,0 chr1 22921815 . A . PASS END=22921815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr1 22921816 . G . PASS END=22921816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 22922599 . G . PASS END=22922666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:32:0,83,1178:0,83,255:40,0 chr1 22923805 . C . PASS END=22923815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,613:0,40,255:19,0 chr1 22923816 . G . PASS END=22923823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:23,0 chr1 22923824 . G . PASS END=22923824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 22923825 . C . PASS END=22923832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:24,0 chr1 22923833 . T . PASS END=22923833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 22923834 . C . PASS END=22923834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 22923835 . A . PASS END=22923835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 22923836 . C . PASS END=22923839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 22923840 . C . PASS END=22923853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 22923854 . A . PASS END=22923854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:27,0 chr1 22923855 . G . PASS END=22923864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1033:0,83,255:33,0 chr1 22923865 . T . PASS END=22923865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:31,0 chr1 22923866 . C . PASS END=22923969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:33:0,88,1174:0,88,255:40,0 chr1 22924169 . G . PASS END=22924185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1186:0,83,255:33,0 chr1 22924186 . T . PASS END=22924186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 22924187 . G . PASS END=22924227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1280:0,89,255:35,0 chr1 22924228 . G . PASS END=22924228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:32,0 chr1 22924229 . T . PASS END=22924237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1303:0,105,255:35,0 chr1 22924238 . A . PASS END=22924238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1130:0,66,255:34,0 chr1 22924239 . G . PASS END=22924250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1253:0,105,255:37,0 chr1 22924251 . C . PASS END=22924251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 22924252 . G . PASS END=22924278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1225:0,89,255:36,0 chr1 22924279 . T . PASS END=22924280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 22924281 . C . PASS END=22924294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1155:0,84,255:30,0 chr1 22924295 . C . PASS END=22924316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:26,0 chr1 22924317 . T . PASS END=22924346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 22924347 . C . PASS END=22924350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 22924351 . C . PASS END=22924354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 22924644 . G . PASS END=22924705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,108,1566:0,113,255:40,0 chr1 22925331 . A . PASS END=22925349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,421:0,36,255:13,0 chr1 22925350 . C . PASS END=22925355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 22925356 . T . PASS END=22925356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 22925357 . G . PASS END=22925357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 22925358 . C . PASS END=22925358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 22925359 . A . PASS END=22925360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 22925361 . C . PASS END=22925372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 22925373 . C . PASS END=22925374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 22925375 . G . PASS END=22925375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 22925376 . A . PASS END=22925382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 22925383 . T . PASS END=22925383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr1 22925384 . G . PASS END=22925398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 22925399 . C . PASS END=22925399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22925400 . T . PASS END=22925408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,727:0,47,255:19,0 chr1 22925409 . G . PASS END=22925412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 22925413 . T . PASS END=22925413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22925414 . G . PASS END=22925415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22925416 . G . PASS END=22925416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 22925417 . C . PASS END=22925436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,909:0,69,255:26,0 chr1 22925437 . C . PASS END=22925438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 22925439 . G . PASS END=22925439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 22925440 . C . PASS END=22925445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 22925446 . A . PASS END=22925446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,0 chr1 22925447 . C . PASS END=22925448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 22925449 . T . PASS END=22925449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:27,0 chr1 22925450 . C . PASS END=22925450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 22925451 . C . PASS END=22925464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,871:0,86,255:29,0 chr1 22925465 . C . PASS END=22925465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 22925466 . C . PASS END=22925475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 22925476 . A . PASS END=22925492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:24:0,67,886:0,67,255:24,0 chr1 22925493 . C . PASS END=22925493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 22925494 . T . PASS END=22925513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,726:0,69,255:24,0 chr1 22925514 . G . PASS END=22925514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr1 22925515 . A . PASS END=22925540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 22927154 . G . PASS END=22927157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 22927158 . G . PASS END=22927189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,853:0,62,255:26,0 chr1 22927190 . G . PASS END=22927219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1039:0,80,255:32,0 chr1 22927220 . A . PASS END=22927220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 22927221 . G . PASS END=22927233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1163:0,80,255:32,0 chr1 22927234 . C . PASS END=22927234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:30,0 chr1 22927235 . T . PASS END=22927252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1135:0,80,255:32,0 chr1 22927253 . G . PASS END=22927275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 22927276 . G . PASS END=22927285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 22927286 . A . PASS END=22927286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 22927287 . A . PASS END=22927298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,864:0,72,255:25,0 chr1 22927299 . G . PASS END=22927299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 22927300 . G . PASS END=22927303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 22927391 . G . PASS END=22927442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,552:0,48,255:18,0 chr1 22927443 . C . PASS END=22927443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 22927444 . C . PASS END=22927452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:17,0 chr1 22927453 . G . PASS END=22927453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 22927454 . C . PASS END=22927460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 22927461 . T . PASS END=22927461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:16,0 chr1 22927462 . C . PASS END=22927520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,593:0,51,255:19,0 chr1 22927521 . G . PASS END=22927535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,34,255:13,0 chr1 22927536 . T . PASS END=22927536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 22927537 . C . PASS END=22927547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,398:0,36,255:12,0 chr1 22927548 . C . PASS END=22927548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 22927549 . T . PASS END=22927558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,338:0,36,255:12,0 chr1 22927559 . A . PASS END=22927559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:11,0 chr1 22927560 . G . PASS END=22927565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 22927566 . C . PASS END=22927566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 22927567 . C . PASS END=22927569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 22927570 . C . PASS END=22927570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 22927571 . A . PASS END=22927581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 22927793 . G . PASS END=22927793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22927794 . T . PASS END=22927802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22927803 . C . PASS END=22927803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 22927804 . C . PASS END=22927805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 22927806 . G . PASS END=22927806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 22927807 . C . PASS END=22927817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 22927818 . A . PASS END=22927819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 22927820 . C . PASS END=22927820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 22927821 . T . PASS END=22927823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 22927824 . T . PASS END=22927824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:14,0 chr1 22927825 . T . PASS END=22927846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:16,0 chr1 22927847 . T . PASS END=22927847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 22927848 . G . PASS END=22927862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,635:0,44,255:19,0 chr1 22927863 . A . PASS END=22927875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:20:0,60,699:0,60,255:26,0 chr1 22927876 . G . PASS END=22927888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 22927889 . C . PASS END=22927889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 22927890 . C . PASS END=22927892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr1 22927893 . A . PASS END=22927893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 22927894 . T . PASS END=22927897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22927898 . C . PASS END=22927898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 22927899 . C . PASS END=22927902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 22927903 . A . PASS END=22927903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 22927904 . C . PASS END=22927906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr1 22927907 . A . PASS END=22927907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:26,0 chr1 22927908 . G . PASS END=22927909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22927910 . C . PASS END=22927910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 22927911 . C . PASS END=22927911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22927912 . A . PASS END=22927912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 22927913 . C . PASS END=22927915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22927916 . C . PASS END=22927916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 22927917 . G . PASS END=22927919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 22927920 . G . PASS END=22927926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22927927 . G . PASS END=22927927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 22927928 . A . PASS END=22927934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr1 22927935 . T . PASS END=22927935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:21,0 chr1 22927936 . C . PASS END=22927938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 22927939 . T . PASS END=22927939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 22927940 . G . PASS END=22927941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 22927942 . G . PASS END=22927942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 22927943 . C . PASS END=22927948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 22927949 . G . PASS END=22927949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 22927950 . C . PASS END=22927950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 22927951 . T . PASS END=22927954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,56,255:16,0 chr1 22927955 . C . PASS END=22927955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,767:0,28,255:16,0 chr1 22927956 . A . PASS END=22927966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,55,255:17,0 chr1 22928120 . G . PASS END=22928123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,886:0,66,255:24,0 chr1 22928124 . G . PASS END=22928227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:29:0,87,1124:0,87,255:37,0 chr1 22928228 . C . PASS END=22928234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 22964110 . A . PASS END=22964110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 22964111 . T . PASS END=22964135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,372:0,33,255:12,0 chr1 22964136 . G . PASS END=22964136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 22964137 . C . PASS END=22964140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 22964141 . G . PASS END=22964144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22964145 . G . PASS END=22964151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 22964152 . A . PASS END=22964152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 22964153 . T . PASS END=22964155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 22964156 . C . PASS END=22964156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 22964157 . G . PASS END=22964161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 22964162 . C . PASS END=22964164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 22964165 . C . PASS END=22964165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 22964166 . T . PASS END=22964167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 22964168 . T . PASS END=22964168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 22964169 . G . PASS END=22964223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:17,0 chr1 22964224 . C . PASS END=22964225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 22964226 . T . PASS END=22964231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:14:0,27,405:0,42,255:9,0 chr1 22964232 . A . PASS END=22964261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 22964262 . A . PASS END=22964262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 22964263 . G . PASS END=22964272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 22965326 . G . PASS END=22965365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,374:0,33,255:13,0 chr1 22965366 . A . PASS END=22965366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 22965367 . G . PASS END=22965377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,376:0,36,255:13,0 chr1 22965378 . A . PASS END=22965400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:18,0 chr1 22965401 . G . PASS END=22965406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 22965407 . T . PASS END=22965407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 22965408 . G . PASS END=22965413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:18,0 chr1 22965414 . C . PASS END=22965414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:20,0 chr1 22965415 . C . PASS END=22965417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 22965418 . G . PASS END=22965418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 22965419 . G . PASS END=22965424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr1 22965425 . G . PASS END=22965425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 22965426 . C . PASS END=22965426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:20,0 chr1 22965427 . G . PASS END=22965427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 22965428 . G . PASS END=22965437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:25,0 chr1 22965438 . A G, 49.17 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:6,3,0:9,9,0:48:84,0,50,392,526,918:255,0,255:15,0:4.9166e+01,7.4293e-05,5.3000e+01,3.9229e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,7,5:8,7,4,8 chr1 22965439 . G . PASS END=22965442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 22965443 . G . PASS END=22965446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 22965447 . C . PASS END=22965447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 22965448 . A . PASS END=22965457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,914:0,84,255:28,0 chr1 22965458 . T . PASS END=22965458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:26,0 chr1 22965459 . T . PASS END=22965459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 22965460 . A . PASS END=22965460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 22965461 . A . PASS END=22965468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,958:0,84,255:30,0 chr1 22965469 . A . PASS END=22965469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:28,0 chr1 22965470 . A . PASS END=22965473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 22965474 . C . PASS END=22965474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 22965475 . A . PASS END=22965475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22965476 . G . PASS END=22965476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 22965477 . C . PASS END=22965477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 22965478 . C . PASS END=22965479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 22965480 . A . PASS END=22965480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 22965481 . G . PASS END=22965485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 22965486 . C . PASS END=22965486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 22965487 . A . PASS END=22965511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1072:0,80,255:31,0 chr1 22965512 . T . PASS END=22965512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,895:0,34,255:26,0 chr1 22965513 . C . PASS END=22965522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 22965523 . C . PASS END=22965523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 22965524 . G . PASS END=22965528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22965529 . A . PASS END=22965530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1016:0,71,255:27,0 chr1 22965531 . C . PASS END=22965546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1020:0,80,255:32,0 chr1 22965547 . A . PASS END=22965547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 22965548 . A . PASS END=22965549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22965550 . G . PASS END=22965567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1000:0,70,255:27,0 chr1 22965568 . G . PASS END=22965568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22965569 . T . PASS END=22965570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22965571 . A . PASS END=22965571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:25,0 chr1 22965572 . T . PASS END=22965581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,80,255:26,0 chr1 22965582 . G . PASS END=22965582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22965583 . G . PASS END=22965584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 22965585 . A . PASS END=22965585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:24,0 chr1 22965586 . G . PASS END=22965596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr1 22965597 . G . PASS END=22965598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22965599 . A . PASS END=22965601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 22965602 . A . PASS END=22965612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 22965613 . T . PASS END=22965615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:27,0 chr1 22965616 . G . PASS END=22965616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22965617 . T . PASS END=22965687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,816:0,61,255:26,0 chr1 22965688 . G . PASS END=22965688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 22965689 . T . PASS END=22965704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,856:0,72,255:26,0 chr1 22965705 . C . PASS END=22965705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 22965706 . C . PASS END=22965752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,829:0,69,255:25,0 chr1 22965753 . C . PASS END=22965891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1117:0,80,255:40,0 chr1 22965892 . T . PASS END=22965900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 22970517 . A . PASS END=22970532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr1 22970533 . G . PASS END=22970555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr1 22970556 . A . PASS END=22970556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 22970557 . A . PASS END=22970560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 22970561 . G . PASS END=22970561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 22970562 . C . PASS END=22970641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,568:0,45,255:19,0 chr1 22970642 . C . PASS END=22970643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 22970644 . G . PASS END=22970658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:15,0 chr1 22970659 . A . PASS END=22970697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 22973720 . G . PASS END=22973756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 22973757 . G . PASS END=22973807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 22973808 . G . PASS END=22973816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 22973817 . T . PASS END=22973833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 22973834 . C . PASS END=22973834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 22973835 . C . PASS END=22973846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 22973847 . C . PASS END=22973847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 22973848 . A . PASS END=22973911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,499:0,42,255:19,0 chr1 22973912 . C . PASS END=22973915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr1 22973916 . G . PASS END=22973916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 22973917 . C . PASS END=22973917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22973918 . A . PASS END=22973918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 22973919 . G . PASS END=22973919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 22973920 . A . PASS END=22973922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 22973923 . C . PASS END=22973928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 22973929 . C . PASS END=22973929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 22973930 . C . PASS END=22973930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 22973931 . C . PASS END=22973931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 22973932 . C . PASS END=22973945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr1 22973946 . C . PASS END=22973946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 22973947 . C . PASS END=22973965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:26,0 chr1 22973966 . T . PASS END=22973966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:25,0 chr1 22973967 . C . PASS END=22973973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22973974 . A . PASS END=22973985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22973986 . G . PASS END=22973988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 22973989 . T . PASS END=22973993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 22973994 . C . PASS END=22974016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr1 22974017 . G . PASS END=22974017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 22974018 . C . PASS END=22974021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,910:0,48,255:28,0 chr1 22974022 . G . PASS END=22974023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 22974024 . C . PASS END=22974027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:26,0 chr1 22974028 . G . PASS END=22974028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 22974029 . G . PASS END=22974029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 22974030 . C . PASS END=22974030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 22974031 . C . PASS END=22974031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 22974032 . T . PASS END=22974032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 22974033 . C . PASS END=22974033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:29,0 chr1 22974034 . T . PASS END=22974034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 22974035 . A . PASS END=22974038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:26,0 chr1 22974039 . C . PASS END=22974039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 22974040 . T . PASS END=22974046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:26,0 chr1 22974047 . A . PASS END=22974047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:25,0 chr1 22974048 . C . PASS END=22974048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:25,0 chr1 22974049 . C . PASS END=22974049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:26,0 chr1 22974050 . A . PASS END=22974050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:25,0 chr1 22974051 . C . PASS END=22974051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 22974052 . G . PASS END=22974052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,976:0,45,255:24,0 chr1 22974053 . C . PASS END=22974053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 22974054 . G . PASS END=22974054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1019:0,51,255:26,0 chr1 22974055 . T . PASS END=22974055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 22974056 . C . PASS END=22974056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:25,0 chr1 22974057 . G . PASS END=22974057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 22974058 . C . PASS END=22974060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr1 22974061 . A . PASS END=22974061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:24,0 chr1 22974062 . C . PASS END=22974080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 22974081 . G . PASS END=22974081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22974082 . C . PASS END=22974083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1037:0,71,255:26,0 chr1 22974084 . G . PASS END=22974101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:30,0 chr1 22974102 . A . PASS END=22974104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 22974105 . G . PASS END=22974107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 22974108 . C . PASS END=22974109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1131:0,77,255:26,0 chr1 22974110 . C . PASS END=22974136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1086:0,90,255:30,0 chr1 22974137 . A . PASS END=22974137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:29,0 chr1 22974138 . T . PASS END=22974145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:30,0 chr1 22974146 . A . PASS END=22974146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,877:0,73,255:29,0 chr1 22974147 . C . PASS END=22974152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 22974153 . C . PASS END=22974153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 22974154 . G . PASS END=22974155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 22974156 . T . PASS END=22974156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:30,0 chr1 22974157 . G . PASS END=22974157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:31,0 chr1 22974158 . T . PASS END=22974170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1263:0,86,255:35,0 chr1 22974171 . G . PASS END=22974172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 22974173 . A . PASS END=22974218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:34:0,82,1349:0,82,255:38,0 chr1 22974219 . G . PASS END=22974219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:35,0 chr1 22974220 . G . PASS END=22974252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1305:0,96,255:36,0 chr1 22974253 . G . PASS END=22974276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1031:0,80,255:31,0 chr1 22985950 . A . PASS END=22985951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 22985952 . G . PASS END=22985952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 22985953 . A . PASS END=22985961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 22985962 . A . PASS END=22985962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 22985963 . T . PASS END=22985977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:19,0 chr1 22985978 . T . PASS END=22986011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 22986012 . A . PASS END=22986012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 22986013 . A . PASS END=22986014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 22986015 . C A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=2.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,16,0:0.640,0.000:25:5,10,0:4,6,0:46:85,0,46,543,293,836:255,0,252:8,0:5.0000e+01,1.0406e-04,4.8557e+01,4.5000e+02,3.2789e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,9,7:3,6,7,9 chr1 22986016 . G . PASS END=22986017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 22986018 . T . PASS END=22986018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 22986019 . A . PASS END=22986052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 22986053 . C . PASS END=22986076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 22986077 . T . PASS END=22986077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 22986078 . C . PASS END=22986082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 22986083 . G . PASS END=22986103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,653:0,44,255:19,0 chr1 22986104 . A . PASS END=22986115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:13:0,30,450:0,39,255:13,0 chr1 22986116 . C . PASS END=22986116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 22986117 . A . PASS END=22986117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:8,0 chr1 22986118 . G . PASS END=22986123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,25,255:9,0 chr1 22986124 . A . PASS END=22986124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:8,0 chr1 22986125 . A . PASS END=22986128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 22986129 . A . PASS END=22986130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 22986131 . A . LowGQ END=22986131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:9,0 chr1 22986132 . G . PASS END=22986132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 22986133 . A . PASS END=22986133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 22986134 . A . PASS END=22986137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 22987305 . G . PASS END=22987306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 22987307 . C . PASS END=22987308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,735:0,60,255:21,0 chr1 22987309 . T . PASS END=22987318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 22987319 . G . PASS END=22987352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,799:0,63,255:26,0 chr1 22987353 . A . PASS END=22987365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 22987366 . T . PASS END=22987366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr1 22987367 . G . PASS END=22987373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 22987374 . C . PASS END=22987374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 22987375 . A . PASS END=22987376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 22987377 . G . PASS END=22987381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 22987382 . G . PASS END=22987382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 22987383 . T . PASS END=22987383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 22987384 . C . PASS END=22987400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1147:0,90,255:30,0 chr1 22987401 . T . PASS END=22987404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,1125:0,60,255:25,0 chr1 22987405 . C . PASS END=22987408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:39:0,81,1413:0,81,255:33,0 chr1 22987409 . A . PASS END=22987409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:31,0 chr1 22987410 . A . PASS END=22987413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1390:0,81,255:32,0 chr1 22987414 . T . PASS END=22987414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:29,0 chr1 22987415 . G . PASS END=22987416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:32,0 chr1 22987417 . C . PASS END=22987417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 22987418 . C . PASS END=22987578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:33:0,84,1291:0,84,255:39,0 chr1 22987579 . G . PASS END=22987579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:6:40:0,6,993:0,6,255:30,0 chr1 22987580 . C . PASS END=22987879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:39:0,84,1395:0,84,255:40,0 chr1 23037476 . A . PASS END=23037511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr1 23037512 . C . LowGQ END=23037512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 23037513 . T . PASS END=23037522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 23037523 . C . PASS END=23037536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 23101093 . A . PASS END=23101132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,120,1800:0,125,255:40,0 chr1 23101695 . A . PASS END=23101725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,120,1800:0,124,255:40,0 chr1 23101726 . G . PASS END=23101737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,155,255:40,0 chr1 23107914 . A . PASS END=23107919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:41:0,84,1277:0,84,255:40,0 chr1 23107920 . T . PASS END=23107920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,7:44:15:44:0,15,1050:0,15,255:35,0 chr1 23107921 . A . PASS END=23107978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,99,1372:0,99,255:40,0 chr1 23110885 . T . PASS END=23110891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,970:0,81,255:29,0 chr1 23110892 . A . PASS END=23110892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:26,0 chr1 23110893 . G . PASS END=23110915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 23110916 . T . PASS END=23110916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 23110917 . G . PASS END=23110947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1056:0,80,255:37,0 chr1 23110948 . G . PASS END=23110948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 23110949 . T . PASS END=23110953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1249:0,95,255:37,0 chr1 23110954 . G . PASS END=23110954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr1 23110955 . A . PASS END=23110963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1327:0,95,255:36,0 chr1 23110964 . A . PASS END=23110964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:33,0 chr1 23110965 . G . PASS END=23110996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:32:0,86,1239:0,86,255:35,0 chr1 23110997 . G . PASS END=23110997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 23110998 . C . PASS END=23111047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1172:0,83,255:35,0 chr1 23111048 . G . PASS END=23111048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:29,0 chr1 23111049 . C . PASS END=23111064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 23111065 . G . PASS END=23111065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 23111066 . T . PASS END=23111083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 23111084 . A . PASS END=23111101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,906:0,62,255:26,0 chr1 23111102 . A . PASS END=23111102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 23111103 . C . PASS END=23111107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 23111108 . A . PASS END=23111108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 23111109 . G . PASS END=23111109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 23111110 . G . PASS END=23111112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 23111113 . G . PASS END=23111123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 23111124 . G . PASS END=23111162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 23111163 . G . PASS END=23111163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 23111164 . G . PASS END=23111173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 23111174 . A . PASS END=23111177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 23111178 . C . PASS END=23111186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 23111187 . C . PASS END=23111195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:20,0 chr1 23111196 . C . PASS END=23111206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 23111207 . T . PASS END=23111211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 23111212 . C . PASS END=23111238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 23111239 . A . PASS END=23111239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,532:0,18,255:16,0 chr1 23111240 . C . PASS END=23111242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 23111243 . A . PASS END=23111243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,570:0,24,255:15,0 chr1 23111244 . G . PASS END=23111245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 23111246 . T . PASS END=23111246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 23111247 . G . PASS END=23111262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,668:0,44,255:19,0 chr1 23111263 . G . PASS END=23111289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,715:0,60,255:26,0 chr1 23111290 . T . PASS END=23111292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 23111293 . C . PASS END=23111322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 23111323 . G . PASS END=23111325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 23111326 . G . PASS END=23111327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 23111328 . G . PASS END=23111329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23111330 . G . PASS END=23111348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,961:0,75,255:26,0 chr1 23111349 . C . PASS END=23111354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 23111355 . C . PASS END=23111368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:26:0,70,986:0,70,255:26,0 chr1 23111369 . G . PASS END=23111373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 23111374 . A . PASS END=23111374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 23111375 . T . PASS END=23111383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr1 23111384 . A . PASS END=23111384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 23111385 . A . PASS END=23111385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23111386 . A . PASS END=23111386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 23111387 . C . PASS END=23111393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 23111394 . G . PASS END=23111394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 23111395 . G . PASS END=23111528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:31:0,80,1177:0,80,255:36,0 chr1 23111529 . A . PASS END=23111529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:28,0 chr1 23111530 . G . PASS END=23111530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 23111531 . C . PASS END=23111543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:24:0,63,945:0,72,255:22,0 chr1 23111544 . C . PASS END=23111544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 23111545 . G . PASS END=23111569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 23189527 . C . PASS END=23189527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 23189530 . G . PASS END=23189533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23189534 . T . PASS END=23189534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 23189535 . C . PASS END=23189645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1019:0,80,255:40,0 chr1 23189646 . T . PASS END=23189655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:28:0,60,900:0,83,255:25,0 chr1 23189656 . A . PASS END=23189657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:28:0,57,855:0,68,255:19,0 chr1 23189658 . C . PASS END=23189677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 23189678 . C . PASS END=23189685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,698:0,46,255:19,0 chr1 23191370 . C . PASS END=23191372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 23191373 . T . PASS END=23191373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 23191374 . C . PASS END=23191376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 23191377 . C . PASS END=23191393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,646:0,60,255:20,0 chr1 23191394 . T . PASS END=23191394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 23191395 . G . PASS END=23191401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 23191402 . A . PASS END=23191403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 23191404 . T . PASS END=23191408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 23191409 . A . PASS END=23191409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 23191410 . T . PASS END=23191412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 23191413 . G . PASS END=23191413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 23191414 . A . PASS END=23191420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:23,0 chr1 23191421 . T . PASS END=23191421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,664:0,52,255:21,0 chr1 23191422 . C . PASS END=23191423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23191424 . T . PASS END=23191424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 23191425 . G . PASS END=23191426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 23191427 . T . PASS END=23191429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 23191430 . A . PASS END=23191441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,864:0,61,255:24,0 chr1 23191442 . C . PASS END=23191442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 23191443 . C . PASS END=23191449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,846:0,72,255:24,0 chr1 23191450 . T . PASS END=23191450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 23191451 . C . PASS END=23191453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 23191454 . G . PASS END=23191454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 23191455 . A . PASS END=23191467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,925:0,75,255:25,0 chr1 23191468 . C . PASS END=23191468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr1 23191469 . T . PASS END=23191469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 23191470 . C . PASS END=23191471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 23191472 . T . PASS END=23191477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 23191478 . A . PASS END=23191484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,759:0,47,255:19,0 chr1 23191485 . C . PASS END=23191485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23191486 . T . PASS END=23191486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 23191487 . G . PASS END=23191490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 23191491 . G . PASS END=23191491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 23191492 . A . PASS END=23191497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 23191498 . G . PASS END=23191498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 23191499 . G . PASS END=23191507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,892:0,66,255:23,0 chr1 23191508 . G . PASS END=23191508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 23191509 . G . PASS END=23191513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 23191514 . C . PASS END=23191526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:20:0,48,720:0,50,255:17,0 chr1 23191527 . C . PASS END=23191527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,604:0,2,255:17,0 chr1 23191528 . G . PASS END=23191541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 23191542 . G . PASS END=23191564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,67,255:24,0 chr1 23191565 . T . PASS END=23191565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 23191566 . G . PASS END=23191598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 23191599 . G . PASS END=23191599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 23191600 . G . PASS END=23191605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1061:0,71,255:27,0 chr1 23191606 . A . PASS END=23191622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1111:0,80,255:31,0 chr1 23191623 . G . PASS END=23191623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:28,0 chr1 23191624 . A . PASS END=23191625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 23191626 . C . PASS END=23191626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 23191627 . C . PASS END=23191632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1125:0,90,255:30,0 chr1 23191633 . G . PASS END=23191633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 23191634 . T . PASS END=23191634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 23191635 . G . PASS END=23191635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 23191636 . A . PASS END=23191636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 23191637 . A . PASS END=23191637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:29,0 chr1 23191638 . C . PASS END=23191643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:32,0 chr1 23191644 . T . PASS END=23191644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:29,0 chr1 23191645 . A . PASS END=23191649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:33,0 chr1 23191650 . C . PASS END=23191650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1149:0,55,255:31,0 chr1 23191651 . C . PASS END=23191655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1162:0,83,255:33,0 chr1 23191656 . C . PASS END=23191656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr1 23191657 . C . PASS END=23191657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1274:0,102,255:34,0 chr1 23191658 . C . PASS END=23191658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1193:0,55,255:31,0 chr1 23191659 . C . PASS END=23191660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1263:0,86,255:33,0 chr1 23191661 . T . PASS END=23191661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:31,0 chr1 23191662 . C . PASS END=23191666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:31,0 chr1 23191667 . C . PASS END=23191667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:30,0 chr1 23191668 . T . PASS END=23191674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 23191675 . G . PASS END=23191675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1143:0,68,255:27,0 chr1 23191676 . C . PASS END=23191679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:28,0 chr1 23191680 . T . PASS END=23191684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:26,0 chr1 23191685 . A . PASS END=23191685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:25,0 chr1 23191686 . C . PASS END=23191690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:77:28:0,77,1131:0,77,255:26,0 chr1 23191691 . C . PASS END=23191691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 23191692 . C . PASS END=23191692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 23191693 . A . PASS END=23191693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23191694 . C . PASS END=23191694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 23191695 . C . PASS END=23191695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 23191696 . A . PASS END=23191696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 23191697 . A . PASS END=23191697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,861:0,80,255:27,0 chr1 23191698 . C . PASS END=23191705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr1 23208852 . C . PASS END=23208854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 23208855 . C . PASS END=23208885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1047:0,83,255:37,0 chr1 23208886 . C . PASS END=23208886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 23208887 . C . PASS END=23208961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,88,255:39,0 chr1 23208962 . C . PASS END=23208976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:26,0 chr1 23217622 . A . PASS END=23217642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:81:0,120,1800:0,213,255:40,0 chr1 23219374 . C . PASS END=23219400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,113,1550:0,113,255:40,0 chr1 23219401 . G . PASS END=23219401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:39,0 chr1 23219402 . C . PASS END=23219455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,108,1582:0,108,255:40,0 chr1 23219456 . T . PASS END=23219492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:83:33:0,83,1202:0,83,255:40,0 chr1 23219493 . T C, 148.86 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,20,0:0,14,0:99:187,102,0,1273,102,1273:255,102,0:0,0:1.4886e+02,9.8864e+01,0.0000e+00,4.5000e+02,1.3363e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,19:0,0,19,15 chr1 23219494 . T . PASS END=23219506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 23219507 . G . PASS END=23219507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 23219508 . C . PASS END=23219511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 23219512 . A . PASS END=23219512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 23219513 . A . PASS END=23219515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 23219516 . T . PASS END=23219516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 23219517 . G . PASS END=23219517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 23219518 . T . PASS END=23219526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,71,255:26,0 chr1 23219527 . A . PASS END=23219527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,984:0,32,255:23,0 chr1 23219528 . C . PASS END=23219530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,71,255:22,0 chr1 23219531 . T . PASS END=23219539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:23,0 chr1 23221965 . C . PASS END=23222073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:37:0,93,1485:0,93,255:40,0 chr1 23222904 . A . PASS END=23222971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,91,255:40,0 chr1 23232480 . T . PASS END=23232602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:39:0,117,1421:0,117,255:40,0 chr1 23233203 . G . PASS END=23233212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 23233213 . C . PASS END=23233217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:17,0 chr1 23233218 . T . PASS END=23233218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 23233219 . C . PASS END=23233229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 23233230 . A . PASS END=23233249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 23233250 . A . PASS END=23233250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 23233251 . G . PASS END=23233251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 23233252 . A . PASS END=23233252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:20,0 chr1 23233253 . G . PASS END=23233272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,714:0,63,255:22,0 chr1 23233273 . G . PASS END=23233273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23233274 . A . PASS END=23233294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:26,0 chr1 23233295 . G . PASS END=23233301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr1 23233302 . A . PASS END=23233302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 23233303 . G . PASS END=23233315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1080:0,84,255:29,0 chr1 23233316 . C . PASS END=23233316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 23233317 . T . PASS END=23233321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 23233322 . G . PASS END=23233325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 23233326 . C . PASS END=23233337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 23233338 . G . PASS END=23233358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 23233359 . T . PASS END=23233359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:23,0 chr1 23233360 . C . PASS END=23233384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:26,0 chr1 23233385 . A . PASS END=23233385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 23233386 . A . PASS END=23233403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,922:0,62,255:25,0 chr1 23233404 . T . PASS END=23233404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 23233405 . C . PASS END=23233405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23233406 . A . PASS END=23233406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 23233407 . T . PASS END=23233421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 23233422 . A . PASS END=23233442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 23233443 . T . PASS END=23233443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:15,0 chr1 23233444 . T . PASS END=23233449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:17,0 chr1 23233450 . G . PASS END=23233450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:15,0 chr1 23234446 . C . PASS END=23234448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 23234449 . A . PASS END=23234449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,590:0,18,255:18,0 chr1 23234450 . A . PASS END=23234452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 23234453 . A . PASS END=23234454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23234455 . G . PASS END=23234455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 23234456 . G . PASS END=23234458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 23234459 . A . PASS END=23234459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 23234460 . G . PASS END=23234486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,953:0,75,255:26,0 chr1 23234487 . G . PASS END=23234639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1215:0,84,255:40,0 chr1 23234640 . C . PASS END=23234661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:60:21:0,60,900:0,63,255:24,0 chr1 23235515 . G . PASS END=23235543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,671:0,63,255:26,0 chr1 23235544 . C . PASS END=23235544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 23235545 . C . PASS END=23235545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 23235546 . C . PASS END=23235554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:31,0 chr1 23235555 . T . PASS END=23235555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1035:0,62,255:30,0 chr1 23235556 . C . PASS END=23235589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1074:0,82,255:33,0 chr1 23235590 . T . PASS END=23235590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 23235591 . G . PASS END=23235595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:33,0 chr1 23235596 . T . PASS END=23235596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr1 23235597 . A . PASS END=23235603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 23235604 . T . PASS END=23235604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:31,0 chr1 23235605 . G . PASS END=23235607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1231:0,86,255:32,0 chr1 23235608 . A . PASS END=23235608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr1 23235609 . T . PASS END=23235623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:34,0 chr1 23235624 . C . PASS END=23235627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 23235628 . T . PASS END=23235634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 23235635 . C . PASS END=23235655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,831:0,66,255:25,0 chr1 23235656 . A . PASS END=23235657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 23235658 . C . PASS END=23235664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 23236875 . G . PASS END=23236879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 23236880 . C . PASS END=23236880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 23236881 . A . PASS END=23236889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 23236890 . G . PASS END=23236896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 23236897 . A . PASS END=23236897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 23236898 . C . PASS END=23236905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 23236906 . T . PASS END=23236906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 23236907 . G . PASS END=23236920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1096:0,90,255:33,0 chr1 23236921 . A . PASS END=23236921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:31,0 chr1 23236922 . C . PASS END=23236963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:33:0,96,1263:0,98,255:38,0 chr1 23236964 . G . PASS END=23236964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 23236965 . A . PASS END=23237028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1141:0,80,255:38,0 chr1 23237029 . A . PASS END=23237059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:26,0 chr1 23237060 . C . PASS END=23237068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:22:0,48,720:0,53,255:19,0 chr1 23238937 . C . PASS END=23238949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 23238950 . C . PASS END=23238954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 23238955 . G . PASS END=23238955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 23238956 . G . PASS END=23238962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr1 23238963 . C . PASS END=23238963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 23238964 . G . PASS END=23238964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 23238965 . A . PASS END=23238974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,979:0,81,255:28,0 chr1 23238975 . A . PASS END=23238975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 23238976 . C . PASS END=23238977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 23238978 . C . PASS END=23238978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 23238979 . C . PASS END=23239073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:28:0,81,1014:0,82,255:37,0 chr1 23239074 . T . PASS END=23239074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:30,0 chr1 23239075 . G . PASS END=23239075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 23239076 . T . PASS END=23239076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 23239077 . C . PASS END=23239085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 23239086 . T . PASS END=23239094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:27:0,60,900:0,74,255:26,0 chr1 23239095 . A . PASS END=23239096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 23239955 . G . PASS END=23240046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,120,1800:0,131,255:40,0 chr1 23240047 . A . PASS END=23240063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,117,1637:0,119,255:40,0 chr1 23240151 . G . PASS END=23240186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:23,0 chr1 23240187 . A . PASS END=23240187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 23240188 . G . PASS END=23240196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 23240197 . G . PASS END=23240197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 23240198 . G . PASS END=23240201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 23240202 . C . PASS END=23240202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 23240203 . A . PASS END=23240209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 23240210 . A . PASS END=23240210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr1 23240211 . G . PASS END=23240211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 23240212 . A . PASS END=23240212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,766:0,39,255:19,0 chr1 23240213 . C . PASS END=23240218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23240219 . C . PASS END=23240219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 23240220 . A . PASS END=23240220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 23240221 . A . PASS END=23240221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,623:0,33,255:20,0 chr1 23240222 . G . PASS END=23240229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,764:0,69,255:25,0 chr1 23240230 . G . PASS END=23240231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 23240232 . A . PASS END=23240234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 23240235 . T . PASS END=23240235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,787:0,44,255:24,0 chr1 23240236 . C . PASS END=23240236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,842:0,75,255:25,0 chr1 23240237 . A . PASS END=23240237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 23240238 . A . PASS END=23240238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr1 23240239 . A . PASS END=23240239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,738:0,58,255:24,0 chr1 23240240 . C . PASS END=23240241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 23240242 . A . PASS END=23240243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 23240244 . G . PASS END=23240244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 23240245 . G . PASS END=23240245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,719:0,25,255:21,0 chr1 23240246 . A . PASS END=23240254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 23240255 . G . PASS END=23240255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:22,0 chr1 23240256 . G . PASS END=23240260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:24,0 chr1 23240261 . G . PASS END=23240261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:23,0 chr1 23240262 . G . PASS END=23240262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:24,0 chr1 23240263 . G . PASS END=23240263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,778:0,20,255:22,0 chr1 23240264 . A . PASS END=23240266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 23240267 . A . PASS END=23240269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23240270 . G . PASS END=23240270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:18:28:0,18,782:0,18,255:22,0 chr1 23240271 . A . PASS END=23240273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 23240274 . A . PASS END=23240274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,874:0,37,255:23,0 chr1 23240275 . C . PASS END=23240275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:23,0 chr1 23240276 . A . PASS END=23240276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:24,0 chr1 23240277 . G . PASS END=23240277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,860:0,51,255:24,0 chr1 23240278 . A . PASS END=23240278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 23240279 . T . PASS END=23240279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,901:0,43,255:25,0 chr1 23240280 . C . PASS END=23240280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:25,0 chr1 23240281 . C . PASS END=23240281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:45:31:0,45,830:0,45,255:24,0 chr1 23240282 . T . PASS END=23240282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:12:31:0,12,825:0,12,255:20,0 chr1 23240283 . G . PASS END=23240285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 23240286 . A . PASS END=23240286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:12:31:0,12,831:0,12,255:22,0 chr1 23240287 . G . PASS END=23240287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 23240288 . G . PASS END=23240291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 23240292 . C . LowGQ END=23240292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,765:51,0,255:24,0 chr1 23240293 . G . PASS END=23240294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 23240295 . G . PASS END=23240295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,836:0,56,255:27,0 chr1 23240296 . A . PASS END=23240303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1066:0,90,255:30,0 chr1 23240304 . G . PASS END=23240305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 23240306 . A . PASS END=23240329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,973:0,90,255:30,0 chr1 23240330 . T . PASS END=23240345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,945:0,65,255:25,0 chr1 23240346 . T . PASS END=23240346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 23240347 . G . PASS END=23240360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 23240361 . T . PASS END=23240363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr1 23279536 . T . PASS END=23279568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,180:0,18,180:6,0 chr1 23279569 . C . PASS END=23279577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 23279578 . T . PASS END=23279578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 23279579 . C . PASS END=23279589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 23279590 . G . PASS END=23279590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 23279591 . A . PASS END=23279631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 23279632 . C . PASS END=23279632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 23279633 . A . PASS END=23279637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 23279638 . G . PASS END=23279646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:7,0 chr1 23279647 . G . PASS END=23279672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr1 23279673 . G . PASS END=23279710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,108:3,0 chr1 23279711 . A . PASS END=23279740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 23279741 . C . PASS END=23279768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,108:3,0 chr1 23279769 . T . PASS END=23279812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 23279813 . T . PASS END=23279845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 23279846 . C . LowGQ END=23279849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:4:0,0,116:0,0,140:3,0 chr1 23279850 . C . PASS END=23279864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,210:6,0 chr1 23279865 . G . PASS END=23279873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 23279874 . A . PASS END=23279874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,170:0,4,170:6,0 chr1 23279875 . G . PASS END=23279882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 23279883 . A . PASS END=23279883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 23279884 . G . PASS END=23279886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 23279887 . G . PASS END=23279887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 23279888 . G . PASS END=23279890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 23279891 . A . LowGQ END=23279891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:6,0 chr1 23279892 . A . PASS END=23279912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:8,0 chr1 23279913 . G . PASS END=23279913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 23279914 . A . PASS END=23279918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 23279919 . G . PASS END=23279919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 23279920 . G . PASS END=23279958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 23279959 . C . PASS END=23279961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 23279962 . G . PASS END=23280003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 23280004 . C . PASS END=23280014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,249:6,0 chr1 23280015 . C . PASS END=23280096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:9,0 chr1 23280097 . C . PASS END=23280107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 23280108 . A . PASS END=23280170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 23280171 . A . PASS END=23280194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr1 23280195 . T . PASS END=23280195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 23280196 . C . PASS END=23280217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 23280218 . A . PASS END=23280218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr1 23280219 . G . PASS END=23280261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr1 23280262 . C . PASS END=23280262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 23280263 . A . PASS END=23280266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 23280267 . C . PASS END=23280282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 23280283 . C . PASS END=23280340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 23280341 . C . PASS END=23280347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 23280348 . A . PASS END=23280348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 23280349 . G . PASS END=23280364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 23280365 . G . PASS END=23280365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 23280366 . C . PASS END=23280372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 23280373 . G . PASS END=23280383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 23280384 . G . PASS END=23280438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 23280439 . G . PASS END=23280478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 23280479 . T . PASS END=23280488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 23280489 . G . LowGQ END=23280489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:7,0 chr1 23280490 . C . PASS END=23280491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23280492 . A . PASS END=23280496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 23280497 . G . PASS END=23280497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 23280498 . C . PASS END=23280502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 23280503 . G . PASS END=23280510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 23280511 . A . PASS END=23280511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 23280512 . T . PASS END=23280512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 23280513 . G . PASS END=23280517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 23281814 . C . PASS END=23281887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1119:0,89,255:33,0 chr1 23281888 . C . PASS END=23281914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 23281915 . C . PASS END=23281919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 23285178 . C . PASS END=23285178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 23285179 . T . PASS END=23285179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 23285180 . G . PASS END=23285196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 23285197 . C . PASS END=23285214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,491:0,42,255:16,0 chr1 23285215 . T . PASS END=23285215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 23285216 . G . PASS END=23285218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 23285219 . G . PASS END=23285219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 23285220 . G . PASS END=23285220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 23285221 . C . PASS END=23285225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 23285226 . G . PASS END=23285230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 23285231 . G . PASS END=23285232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 23285233 . G . PASS END=23285233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 23285234 . C . PASS END=23285234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 23285235 . C . PASS END=23285236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,798:0,50,255:21,0 chr1 23285237 . A . PASS END=23285244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 23285245 . C . PASS END=23285245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 23285246 . A . PASS END=23285255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,864:0,72,255:25,0 chr1 23285256 . T . PASS END=23285256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 23285257 . C . PASS END=23285294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:26,0 chr1 23285295 . T . PASS END=23285299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,973:0,84,255:29,0 chr1 23285300 . A . PASS END=23285300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr1 23285301 . T . PASS END=23285316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 23285317 . A . PASS END=23285317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 23285318 . T . PASS END=23285325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 23285326 . C . PASS END=23285326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 23285327 . A . PASS END=23285327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 23285328 . G . PASS END=23285343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,986:0,68,255:26,0 chr1 23285344 . G . PASS END=23285351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 23285352 . T . PASS END=23285352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 23285353 . G . PASS END=23285356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 23285357 . T . PASS END=23285370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 23285371 . G . PASS END=23285389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:18,0 chr1 23285390 . A . PASS END=23285392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,41,255:13,0 chr1 23285393 . A . PASS END=23285407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 23285408 . G . PASS END=23285413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 23286435 . C . PASS END=23286573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1215:0,84,255:40,0 chr1 23286574 . G . PASS END=23286582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 23286583 . T . PASS END=23286583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:23,0 chr1 23286584 . C . PASS END=23286592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,939:0,64,255:24,0 chr1 23289600 . C . PASS END=23289613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 23289614 . C . PASS END=23289656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr1 23289657 . G . PASS END=23289683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:18,0 chr1 23289684 . A . PASS END=23289709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 23291783 . C . PASS END=23291915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1150:0,80,255:40,0 chr1 23291916 . A . PASS END=23291916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:29,0 chr1 23291917 . T . PASS END=23291918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:29,0 chr1 23298798 . C . PASS END=23298809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,107,1653:0,107,255:40,0 chr1 23337394 . T . PASS END=23337412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 23337413 . G . PASS END=23337413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 23337414 . T . PASS END=23337415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23337416 . C . PASS END=23337631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:87:30:0,87,1241:0,88,255:40,0 chr1 23337632 . T . PASS END=23337668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:48:0,83,1479:0,83,255:40,0 chr1 23337669 . C . LowGQ END=23337669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,10:50:0:50:0,0,1236:16,0,255:40,0 chr1 23337670 . A . PASS END=23337671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,149,255:40,0 chr1 23337672 . A . PASS END=23337672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:69:50:0,69,1450:0,69,255:40,0 chr1 23337673 . A . PASS END=23337673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 23337674 . G . PASS END=23337674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,7:50:33:50:0,33,1313:0,33,255:40,0 chr1 23337675 . T . PASS END=23337684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:85:49:0,85,1489:0,85,255:40,0 chr1 23337685 . C . LowGQ END=23337685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,9:51:0:51:0,0,1391:10,0,255:40,0 chr1 23337686 . T . PASS END=23337686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1525:0,67,255:40,0 chr1 23337687 . C . PASS END=23337689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,136,255:40,0 chr1 23337690 . C . LowGQ END=23337690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,8:51:0:51:0,0,1379:2,0,255:40,0 chr1 23337691 . C . PASS END=23337691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 23337692 . T . PASS END=23337692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:17:51:0,17,1504:0,17,255:40,0 chr1 23337693 . C . PASS END=23337693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr1 23340376 . C . PASS END=23340383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 23340384 . G . PASS END=23340413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1141:0,80,255:31,0 chr1 23340414 . T . PASS END=23340450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1239:0,86,255:38,0 chr1 23340451 . G A, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=3.737;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:11,9,0:8,10,0:48:85,0,50,643,635,1277:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,10,9:9,10,12,7 chr1 23340452 . A . PASS END=23340488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,111,1590:0,113,255:40,0 chr1 23340489 . C . PASS END=23340540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1305:0,87,255:40,0 chr1 23342265 . A . PASS END=23342266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:100:0,120,1800:0,255,255:40,0 chr1 23346090 . A . PASS END=23346090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:14,0 chr1 23346091 . T . PASS END=23346095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 23346096 . T . PASS END=23346096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr1 23346097 . C . PASS END=23346104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,527:0,45,255:16,0 chr1 23346105 . A . PASS END=23346105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 23346106 . A . PASS END=23346108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,523:0,48,255:17,0 chr1 23346109 . C . PASS END=23346109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 23346110 . G . PASS END=23346151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,570:0,51,255:17,0 chr1 23346152 . G . PASS END=23346152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 23346153 . G . PASS END=23346156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,53,255:19,0 chr1 23346157 . C . PASS END=23346157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 23346158 . T . PASS END=23346158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:19,0 chr1 23346159 . G . PASS END=23346160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 23346161 . C . PASS END=23346163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 23346164 . T . PASS END=23346164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 23346165 . G . PASS END=23346185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 23346186 . A . PASS END=23346186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,546:0,29,255:18,0 chr1 23346187 . A . PASS END=23346187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23346188 . C . PASS END=23346208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,52,255:18,0 chr1 23346209 . G . PASS END=23346209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:17,0 chr1 23346210 . C . PASS END=23346217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:19:0,46,698:0,46,255:19,0 chr1 23346218 . C . PASS END=23346219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 23346220 . T . PASS END=23346228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,639:0,46,255:20,0 chr1 23346229 . C . PASS END=23346230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23346231 . G . PASS END=23346231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 23346232 . C . PASS END=23346234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 23346235 . A . PASS END=23346235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 23346236 . G . PASS END=23346242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 23346243 . C . PASS END=23346245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 23346246 . G . PASS END=23346275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,67,255:26,0 chr1 23346276 . A . PASS END=23346276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,639:0,58,255:20,0 chr1 23346277 . A . PASS END=23346277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 23346278 . A . PASS END=23346278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 23346279 . G . PASS END=23346293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr1 23346294 . T . PASS END=23346316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,696:0,44,255:19,0 chr1 23346317 . A . PASS END=23346317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:17,0 chr1 23346318 . C . PASS END=23346323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:18,0 chr1 23346324 . G . PASS END=23346324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:17,0 chr1 23346325 . G . PASS END=23346343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 23346344 . C . PASS END=23346345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 23346346 . G . PASS END=23346350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 23346351 . A . PASS END=23346353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 23346354 . G . PASS END=23346355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 23346356 . C . PASS END=23346366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 23346367 . C . PASS END=23346369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 23346370 . C . PASS END=23346372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 23346373 . C . PASS END=23346373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 23346374 . C . PASS END=23346391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 23346392 . A . PASS END=23346392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:9,0 chr1 23346393 . G . PASS END=23346394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 23346395 . A . PASS END=23346401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:11:0,22,366:0,22,255:9,0 chr1 23346402 . C . PASS END=23346407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 23346408 . G . PASS END=23346410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23346411 . C . PASS END=23346419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 23346420 . A . PASS END=23346420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 23346421 . G . PASS END=23346427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 23346428 . C . PASS END=23346428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 23346429 . A . PASS END=23346429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 23346430 . A . PASS END=23346430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 23346431 . G . PASS END=23346431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 23346432 . C . PASS END=23346437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23346438 . A . PASS END=23346438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 23346439 . A . PASS END=23346440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 23356962 . G . PASS END=23356966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 23356967 . G . PASS END=23356969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23356970 . C . PASS END=23356970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:25,0 chr1 23356971 . A . PASS END=23356973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23356974 . G . PASS END=23356974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 23356975 . A . PASS END=23356975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,909:0,45,255:26,0 chr1 23356976 . G . PASS END=23356976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23356977 . A . PASS END=23356977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,833:0,51,255:25,0 chr1 23356978 . T . PASS END=23356990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1022:0,84,255:31,0 chr1 23356991 . G . PASS END=23356991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 23356992 . G . PASS END=23357048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1069:0,80,255:34,0 chr1 23357049 . A . PASS END=23357049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1064:0,57,255:30,0 chr1 23357050 . A . PASS END=23357056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1105:0,80,255:32,0 chr1 23357057 . G . PASS END=23357057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:30,0 chr1 23357058 . A . PASS END=23357063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1105:0,95,255:32,0 chr1 23357064 . C . PASS END=23357064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 23357065 . C . PASS END=23357068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:29,0 chr1 23357069 . A . PASS END=23357069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:27,0 chr1 23357070 . C . PASS END=23357071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:28,0 chr1 23357072 . A . PASS END=23357072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:21,0 chr1 23357073 . C . PASS END=23357073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:31:0,66,990:0,76,255:21,0 chr1 23357074 . C . PASS END=23357077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:23,0 chr1 23357078 . T . PASS END=23357079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:54:29:0,54,856:0,54,255:22,0 chr1 23357080 . A . PASS END=23357085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:25:0,63,945:0,70,255:23,0 chr1 23357086 . C . PASS END=23357086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 23357087 . A . PASS END=23357087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,668:0,36,255:19,0 chr1 23357088 . C . PASS END=23357089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 23357090 . T . PASS END=23357090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,635:0,19,255:16,0 chr1 23357091 . G . PASS END=23357091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 23357092 . A . PASS END=23357092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,705:0,36,255:19,0 chr1 23357093 . G . PASS END=23357097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,49,255:17,0 chr1 23357098 . A . PASS END=23357098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,629:0,16,255:15,0 chr1 23357099 . A . PASS END=23357101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:16,0 chr1 23357102 . T . PASS END=23357102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:16,0 chr1 23357103 . G . LowGQ END=23357103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,567:1,0,255:14,0 chr1 23357104 . A . PASS END=23357104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:16,0 chr1 23357105 . A . PASS END=23357107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:16,0 chr1 23357108 . T . PASS END=23357108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:15,0 chr1 23357109 . G . PASS END=23357110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:15,0 chr1 23357111 . G C, 0.05 DRAGENSnpHardQUAL DP=16;MQ=250.00;MQRankSum=3.059;ReadPosRankSum=1.926;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:11,5,0:0.312,0.000:16:3,3,0:8,2,0:19:15,0,47,147,147,147:60,0,255:10,0:5.0190e-02,1.9397e+01,6.9397e+01,1.6639e+02,2.0116e+02,1.6940e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,7,0,5:8,3,2,3 chr1 23357112 . C . PASS END=23357114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 23357115 . G . PASS END=23357115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,515:0,37,255:16,0 chr1 23357116 . A . PASS END=23357117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 23357118 . G . PASS END=23357118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,446:0,34,255:16,0 chr1 23357119 . A . PASS END=23357121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,635:0,51,255:18,0 chr1 23357122 . C . PASS END=23357123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23357124 . T . PASS END=23357127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,46,255:19,0 chr1 23370920 . G . PASS END=23370979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,128,255:40,0 chr1 23376880 . G . PASS END=23377013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1203:0,93,255:40,0 chr1 23380254 . C . PASS END=23380258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,165,255:40,0 chr1 23380259 . G A, 49.92 PASS DP=77;MQ=250.00;MQRankSum=7.540;ReadPosRankSum=4.226;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,37,0:0.481,0.000:77:19,17,0:21,20,0:47:85,0,47,185,185,185:255,0,255:40,0:4.9921e+01,8.7754e-05,5.0000e+01,1.8469e+02,2.1946e+02,1.8770e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,14,16,21:21,19,22,15 chr1 23380260 . T . PASS END=23380296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:79:0,120,1800:0,205,255:40,0 chr1 23380297 . A . PASS END=23380332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:69:0,120,1800:0,168,255:40,0 chr1 23381562 . G . PASS END=23381654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,120,1800:0,150,255:40,0 chr1 23382425 . C . PASS END=23382431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,973:0,87,255:30,0 chr1 23382432 . G . PASS END=23382433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:29,0 chr1 23382434 . C . PASS END=23382439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:31,0 chr1 23382440 . A . PASS END=23382440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,959:0,54,255:30,0 chr1 23382441 . G . PASS END=23382443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 23382444 . A . PASS END=23382444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 23382445 . A . PASS END=23382447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1196:0,96,255:32,0 chr1 23382448 . A . PASS END=23382448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:36,0 chr1 23382449 . T . PASS END=23382531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:37:0,94,1296:0,94,255:40,0 chr1 23383977 . G . PASS END=23384058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,173,255:40,0 chr1 23385566 . G . PASS END=23385660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:32:0,96,1197:0,96,255:40,0 chr1 23392553 . G . PASS END=23392564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,221,255:40,0 chr1 23395032 . G . PASS END=23395170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:87:32:0,87,1305:0,96,255:40,0 chr1 23395171 . T . PASS END=23395171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 23395172 . T . PASS END=23395174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 23395554 . G . PASS END=23395644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,125,255:40,0 chr1 23397718 . A . PASS END=23397852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:57:0,120,1800:0,155,255:40,0 chr1 23398617 . G . PASS END=23398690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,178,255:40,0 chr1 23399767 . T . PASS END=23399871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,113,1525:0,113,255:40,0 chr1 23399872 . T . PASS END=23399872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1244:0,76,255:35,0 chr1 23399873 . C . PASS END=23399886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,83,255:38,0 chr1 23399887 . C . PASS END=23399894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,73,255:26,0 chr1 23399895 . A . PASS END=23399896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:28:0,63,945:0,67,255:22,0 chr1 23403721 . G . PASS END=23403831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,90,255:40,0 chr1 23403832 . C . PASS END=23403843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,67,255:26,0 chr1 23403844 . A . PASS END=23403845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:25:0,42,630:0,75,255:19,0 chr1 23403846 . G . PASS END=23403853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:20:0,33,495:0,60,255:13,0 chr1 23405468 . A . PASS END=23405473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,954:0,72,255:26,0 chr1 23405474 . C . PASS END=23405656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,942:0,81,255:40,0 chr1 23405657 . G . PASS END=23405657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:28,0 chr1 23405658 . C . PASS END=23405663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1178:0,86,255:31,0 chr1 23405664 . T . PASS END=23405664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr1 23405665 . A . PASS END=23405670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1164:0,83,255:32,0 chr1 23406046 . G . PASS END=23406159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:39:0,84,1260:0,103,255:40,0 chr1 23406160 . G . PASS END=23406160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1249:0,67,255:25,0 chr1 23407939 . C . PASS END=23407940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 23407941 . C . PASS END=23407941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 23407942 . C . PASS END=23407946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,915:0,64,255:26,0 chr1 23407947 . C . PASS END=23407947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:25,0 chr1 23407948 . T . PASS END=23407950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr1 23407951 . T . PASS END=23407952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23407953 . G . PASS END=23407953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:27,0 chr1 23407954 . C . PASS END=23407959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr1 23407960 . T . PASS END=23407960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 23407961 . G . PASS END=23408021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1157:0,81,255:38,0 chr1 23408022 . C . PASS END=23408022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1105:0,75,255:28,0 chr1 23408023 . T . PASS END=23408029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1255:0,86,255:30,0 chr1 23408030 . T . PASS END=23408031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 23408032 . T . PASS END=23408035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 23408036 . A . PASS END=23408036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,898:0,73,255:27,0 chr1 23408037 . G . PASS END=23408039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 23408040 . A . PASS END=23408040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 23408041 . T . PASS END=23408043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 23408044 . T . PASS END=23408044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 23408045 . T . PASS END=23408046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 23408047 . G . PASS END=23408047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 23408048 . T . PASS END=23408049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 23408050 . G . PASS END=23408050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:25,0 chr1 23408051 . C . PASS END=23408052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 23408053 . G . PASS END=23408054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 23408055 . G . PASS END=23408055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:25,0 chr1 23408056 . C . PASS END=23408066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,914:0,62,255:25,0 chr1 23408713 . C . PASS END=23408720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 23408721 . A . PASS END=23408722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23408723 . C . PASS END=23408723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 23408724 . T . PASS END=23408859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1005:0,84,255:40,0 chr1 23408943 . A . PASS END=23408974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,3:69:99:67:0,120,1800:0,143,255:40,0 chr1 23408975 . A . PASS END=23408978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,181,255:40,0 chr1 23409672 . C . PASS END=23409672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 23409673 . C . PASS END=23409699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,763:0,66,255:25,0 chr1 23409700 . A . PASS END=23409700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 23409701 . A . PASS END=23409718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,909:0,75,255:26,0 chr1 23409719 . C . PASS END=23409761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1200:0,83,255:36,0 chr1 23409762 . G . PASS END=23409762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr1 23409763 . C . PASS END=23409817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1031:0,84,255:39,0 chr1 23409818 . C . PASS END=23409839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:26,0 chr1 23409840 . C . PASS END=23409852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,643:0,40,255:19,0 chr1 23409853 . T . PASS END=23409853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:14,0 chr1 23409854 . G . PASS END=23409857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 23415388 . T . PASS END=23415390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 23415391 . G . PASS END=23415400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr1 23415401 . G . PASS END=23415401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 23415402 . C . PASS END=23415402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 23415403 . A . PASS END=23415433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 23415434 . G . PASS END=23415483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:26,0 chr1 23415484 . C . PASS END=23415485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 23415486 . G . PASS END=23415487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 23415488 . T . PASS END=23415496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 23415497 . T . PASS END=23415497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23415498 . T . PASS END=23415517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 23415518 . C . PASS END=23415519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 23415520 . G . PASS END=23415528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:17,0 chr1 23415529 . G . PASS END=23415546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 23417383 . T . PASS END=23417391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1588:0,113,255:40,0 chr1 23417683 . C . PASS END=23417683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 23417684 . A . PASS END=23417686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1027:0,84,255:29,0 chr1 23417687 . C . PASS END=23417687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 23417688 . T . PASS END=23417693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:30,0 chr1 23417694 . A . PASS END=23417694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 23417695 . G . PASS END=23417722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1283:0,84,255:38,0 chr1 23417723 . T . PASS END=23417723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1067:0,77,255:35,0 chr1 23417724 . C . PASS END=23417753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,104,1419:0,104,255:40,0 chr1 23417754 . C . PASS END=23417754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:39,0 chr1 23417755 . T . PASS END=23417780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1357:0,90,255:39,0 chr1 23417781 . T . PASS END=23417781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr1 23417782 . T . PASS END=23417814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1302:0,82,255:36,0 chr1 23417815 . T . PASS END=23417815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1017:0,52,255:27,0 chr1 23417816 . G . PASS END=23417836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:31,0 chr1 23417837 . T . PASS END=23417837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 23417838 . G . PASS END=23417843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 23417844 . A . PASS END=23417846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1020:0,77,255:27,0 chr1 23417847 . G . PASS END=23417848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 23417849 . C . PASS END=23417851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 23417852 . G . PASS END=23417862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1182:0,83,255:33,0 chr1 23417863 . T . PASS END=23417863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1064:0,55,255:32,0 chr1 23417864 . T . PASS END=23418115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1089:0,85,255:40,0 chr1 23418116 . A . PASS END=23418132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 23418133 . G . PASS END=23418148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:27:0,60,900:0,60,255:26,0 chr1 23418149 . C . PASS END=23418149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:21,0 chr1 23418150 . T . PASS END=23418150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 23418151 . G . PASS END=23418152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 23418153 . C T, 49.27 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=2.243;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,14,0:0.452,0.000:31:7,8,0:10,6,0:48:84,0,50,464,608,1072:255,0,255:14,0:4.9274e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,8,6:9,8,4,10 chr1 23418154 . C . PASS END=23418164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1177:0,80,255:29,0 chr1 23418165 . C . PASS END=23418166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 23418167 . T . PASS END=23418172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 23418173 . A . PASS END=23418174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 23418175 . T . PASS END=23418175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,897:0,59,255:25,0 chr1 23418176 . C . PASS END=23418176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 23418177 . T . PASS END=23418182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,956:0,70,255:26,0 chr1 23418183 . C . PASS END=23418190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 23418191 . A . PASS END=23418192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 23418193 . C . PASS END=23418205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,992:0,81,255:27,0 chr1 23418206 . T . PASS END=23418206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 23418207 . C . PASS END=23418214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr1 23418215 . T . PASS END=23418265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,885:0,62,255:26,0 chr1 23418266 . T . PASS END=23418266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 23418267 . C . PASS END=23418268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 23418269 . G . PASS END=23418269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 23418270 . C . PASS END=23418278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 23418279 . C . PASS END=23418282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 23418283 . G . PASS END=23418285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 23418286 . A . PASS END=23418286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 23418287 . T . PASS END=23418287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:18,0 chr1 23418288 . T . PASS END=23418294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 23418295 . G . PASS END=23418301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 23418302 . T . PASS END=23418307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 23418308 . T . PASS END=23418321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 23418322 . A . PASS END=23418337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 23418338 . G . PASS END=23418338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 23418339 . G . PASS END=23418352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 23418353 . G . PASS END=23418353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 23418354 . A . PASS END=23418354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 23418355 . T . PASS END=23418365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,791:0,62,255:26,0 chr1 23418366 . T . PASS END=23418366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,880:0,50,255:25,0 chr1 23418367 . A . PASS END=23418372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,992:0,78,255:26,0 chr1 23418373 . A . PASS END=23418375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 23418376 . T . PASS END=23418376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 23418377 . G . PASS END=23418379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 23418380 . A . PASS END=23418380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 23418381 . C . PASS END=23418381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 23418382 . T . PASS END=23418382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,781:0,50,255:26,0 chr1 23418383 . T . PASS END=23418383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 23418384 . T . PASS END=23418385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1041:0,71,255:28,0 chr1 23418386 . T . PASS END=23418397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1231:0,89,255:33,0 chr1 23418398 . T . PASS END=23418398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1133:0,58,255:31,0 chr1 23418399 . T . PASS END=23418415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1133:0,82,255:36,0 chr1 23418416 . T . PASS END=23418416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:34,0 chr1 23418417 . T . PASS END=23418549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1244:0,81,255:39,0 chr1 23418550 . A . PASS END=23418550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr1 23418551 . C . PASS END=23418916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:87:33:0,87,1251:0,98,255:40,0 chr1 23418917 . T . PASS END=23418917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1283:0,78,255:33,0 chr1 23418918 . C . PASS END=23418984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1215:0,86,255:35,0 chr1 23418985 . A . PASS END=23418987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 23418988 . C . PASS END=23418989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 23418990 . C . PASS END=23418991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 23418992 . A . PASS END=23419003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1141:0,90,255:30,0 chr1 23419004 . G . PASS END=23419004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 23419005 . C . PASS END=23419025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1177:0,80,255:31,0 chr1 23419026 . C . PASS END=23419057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 23419058 . G . PASS END=23419058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 23419059 . C . PASS END=23419076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 23419077 . A . PASS END=23419083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 23419084 . G . PASS END=23419084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23419085 . T . PASS END=23419085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,654:0,27,255:19,0 chr1 23419086 . T . PASS END=23419088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23419089 . C . PASS END=23419090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23419091 . G . PASS END=23419092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 23419093 . C . PASS END=23419094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 23419095 . G . PASS END=23419098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23419099 . T . PASS END=23419099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 23419100 . A . PASS END=23419104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23419105 . A . PASS END=23419105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 23419106 . C . PASS END=23419120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:22,0 chr1 23419121 . A . PASS END=23419121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 23419122 . C . PASS END=23419131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 23419132 . C . PASS END=23419133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 23419134 . T . PASS END=23419134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 23419135 . G . PASS END=23419141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 23419142 . A . PASS END=23419142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:20,0 chr1 23419143 . C . PASS END=23419145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 23419146 . T . PASS END=23419151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 23419152 . A . PASS END=23419153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:21,0 chr1 23419154 . G . PASS END=23419154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:22,0 chr1 23419155 . A . PASS END=23419155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 23419156 . G . PASS END=23419156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 23419157 . G . PASS END=23419158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23419159 . G . PASS END=23419159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr1 23419160 . T . PASS END=23419163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 23419164 . A . PASS END=23419165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 23419166 . G . PASS END=23419166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 23419167 . C . PASS END=23419167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:19,0 chr1 23419168 . C . PASS END=23419170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 23419171 . G . PASS END=23419172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 23419173 . C . PASS END=23419174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 23419175 . G . PASS END=23419175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 23419176 . C . PASS END=23419177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,795:0,36,255:21,0 chr1 23419178 . C . PASS END=23419188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,817:0,61,255:26,0 chr1 23419189 . G . PASS END=23419189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 23419190 . T . PASS END=23419191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 23419192 . A . PASS END=23419199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 23419200 . C . PASS END=23419202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1016:0,68,255:27,0 chr1 23419203 . A . PASS END=23419206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23419207 . A . PASS END=23419213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 23419214 . G . PASS END=23419214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23419215 . T . PASS END=23419237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,803:0,61,255:26,0 chr1 23419238 . T . PASS END=23419238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:24,0 chr1 23419239 . T . PASS END=23419248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 23419249 . T . PASS END=23419249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 23419250 . C . PASS END=23419252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 23419253 . T . PASS END=23419253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 23419254 . T . PASS END=23419259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 23419260 . C . PASS END=23419260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,0 chr1 23419261 . G . PASS END=23419274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,989:0,76,255:26,0 chr1 23419275 . G . PASS END=23419283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 23419284 . T . PASS END=23419300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,968:0,68,255:26,0 chr1 23419301 . C . PASS END=23419301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 23419302 . T . PASS END=23419318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:24:0,62,922:0,62,255:25,0 chr1 23419319 . G . PASS END=23419319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:22,0 chr1 23419320 . G . PASS END=23419320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 23419321 . G . PASS END=23419321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 23419322 . G . PASS END=23419335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,71,255:26,0 chr1 23419336 . C . PASS END=23419336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:24,0 chr1 23419337 . A . PASS END=23419339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,955:0,78,255:26,0 chr1 23419340 . G . PASS END=23419340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 23419341 . A . PASS END=23419349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,945:0,64,255:26,0 chr1 23419350 . C . PASS END=23419350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23419351 . C . PASS END=23419351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 23419352 . C . PASS END=23419354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 23419355 . G . PASS END=23419356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 23419357 . C . PASS END=23419361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23419362 . T . PASS END=23419362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 23419363 . C . PASS END=23419365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23419366 . T . PASS END=23419368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 23419369 . G . PASS END=23419369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23419370 . C . PASS END=23419373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,976:0,68,255:26,0 chr1 23419374 . G . PASS END=23419378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 23419379 . G . PASS END=23419380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 23419381 . G . PASS END=23419381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 23419382 . C . PASS END=23419382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 23419383 . C . PASS END=23419383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 23419384 . G . PASS END=23419385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:26,0 chr1 23419386 . G . PASS END=23419395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1019:0,80,255:28,0 chr1 23419396 . G . PASS END=23419432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,898:0,62,255:26,0 chr1 23419433 . G . PASS END=23419436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 23419437 . T . PASS END=23419443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1092:0,74,255:26,0 chr1 23419444 . C . PASS END=23419446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 23419447 . G . PASS END=23419447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 23419448 . T . PASS END=23419668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:32:0,82,1118:0,82,255:40,1 chr1 23419669 . A . PASS END=23419669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:62:56:0,62,1579:0,62,255:40,0 chr1 23419670 . T . PASS END=23419670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,151,255:40,0 chr1 23419671 . C . PASS END=23419671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:76:55:0,76,1583:0,76,255:40,0 chr1 23419672 . T . PASS END=23419768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:56:0,110,1800:0,110,255:40,0 chr1 23419769 . T . PASS END=23419805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,108,1800:0,108,255:40,2 chr1 23419806 . A C, 50.00 PASS DP=55;MQ=250.00;MQRankSum=6.305;ReadPosRankSum=3.691;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,31,0:0.564,0.000:55:15,17,0:9,14,0:48:85,0,48,1093,801,1894:255,0,255:22,0:5.0000e+01,7.4552e-05,5.1439e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,20,11:12,12,16,15 chr1 23419807 . C . PASS END=23419854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:57:0,120,1800:0,128,255:40,0 chr1 23419855 . T C, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.646;ReadPosRankSum=5.093;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,30,0:0.500,0.000:60:15,15,0:15,15,0:48:85,0,50,1036,1024,2060:255,0,255:29,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,11,19:15,15,20,10 chr1 23419856 . G . PASS END=23419892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,150,255:40,0 chr1 23419893 . C . PASS END=23420521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:35:0,84,1260:0,86,255:40,0 chr1 23420522 . T . PASS END=23420522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:26,0 chr1 23420523 . T . PASS END=23420523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 23420524 . G . PASS END=23420528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:33:0,60,1141:0,60,255:26,0 chr1 23420529 . C . PASS END=23420529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:26,0 chr1 23420530 . A . PASS END=23420532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 23420533 . T . PASS END=23420552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:30,0 chr1 23420553 . G . PASS END=23420554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:25,0 chr1 23420555 . A . PASS END=23420744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1113:0,80,255:40,0 chr1 23420745 . A . PASS END=23420752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:26,0 chr1 23420753 . A . PASS END=23420753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:18,0 chr1 23420754 . T . PASS END=23420754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:21,0 chr1 23519579 . C . PASS END=23519581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:35,0 chr1 23519582 . G . PASS END=23519582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr1 23519583 . G . PASS END=23519583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 23519584 . A . PASS END=23519584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1200:0,36,255:33,0 chr1 23519585 . G . PASS END=23519687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1274:0,92,255:38,0 chr1 23519688 . G . PASS END=23519688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:34,0 chr1 23519689 . T . PASS END=23519693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1272:0,92,255:35,0 chr1 23519694 . A . PASS END=23519694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1110:0,61,255:33,0 chr1 23519695 . A . PASS END=23519899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1172:0,83,255:40,0 chr1 23519900 . A . PASS END=23519900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1394:0,79,255:38,0 chr1 23519901 . G . PASS END=23520117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,85,255:40,0 chr1 23520118 . T . PASS END=23520119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:24,0 chr1 23520120 . G . PASS END=23520180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:33,0 chr1 23520181 . G . PASS END=23520181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:29,0 chr1 23520182 . C . PASS END=23520259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1072:0,84,255:35,0 chr1 23520260 . C . PASS END=23520260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 23520261 . G . PASS END=23520261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 23520262 . T . PASS END=23520295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,859:0,62,255:26,0 chr1 23520296 . T . PASS END=23520297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 23520298 . C . PASS END=23520298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 23520299 . C . PASS END=23520366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr1 23520367 . A . PASS END=23520369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 23520370 . G . PASS END=23520386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 23520387 . A . PASS END=23520387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:13,0 chr1 23520388 . T . PASS END=23520395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 23520396 . A . PASS END=23520396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 23520397 . A . PASS END=23520414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 23520415 . T . PASS END=23520415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 23520416 . G . PASS END=23520421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 23520422 . G . PASS END=23520436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 23520437 . C . PASS END=23520437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 23520438 . A . PASS END=23520441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23520442 . C . PASS END=23520445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 23520446 . G . PASS END=23520454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 23520455 . C . PASS END=23520455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 23520456 . A . PASS END=23520456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 23520457 . A . PASS END=23520457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 23520458 . G . PASS END=23520471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,878:0,72,255:26,0 chr1 23520472 . C . PASS END=23520474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 23520475 . G . PASS END=23520478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 23520479 . G . PASS END=23520484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 23520485 . C . PASS END=23520497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 23520498 . G . PASS END=23520546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1125:0,87,255:36,0 chr1 23520547 . T . PASS END=23520547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:30,0 chr1 23520548 . G . PASS END=23520687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1215:0,84,255:40,0 chr1 23520688 . C . PASS END=23520701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 23520702 . A . PASS END=23520712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr1 23632983 . T . PASS END=23632992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 23632993 . T . PASS END=23632996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 23636947 . C . PASS END=23637138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:84:34:0,84,1156:0,85,255:40,0 chr1 23637139 . T . PASS END=23637163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr1 23637164 . C . PASS END=23637164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 23637165 . G . PASS END=23637185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,807:0,66,255:22,0 chr1 23637186 . C . PASS END=23637189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 23637190 . C . PASS END=23637190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 23637191 . T . PASS END=23637191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 23637192 . G . PASS END=23637194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 23637195 . G . PASS END=23637225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:19,0 chr1 23637226 . G . PASS END=23637226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:15,0 chr1 23637227 . C . PASS END=23637246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 23637247 . T . PASS END=23637247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 23637248 . G . PASS END=23637249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 23637250 . C . PASS END=23637251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 23637252 . C . PASS END=23637261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,665:0,41,255:17,0 chr1 23637262 . A . PASS END=23637263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 23637264 . A . PASS END=23637266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 23637267 . C . PASS END=23637268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr1 23637269 . G . PASS END=23637300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 23637301 . C . PASS END=23637302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 23637303 . T . PASS END=23637303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,658:0,36,255:19,0 chr1 23637304 . T . PASS END=23637328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:26,0 chr1 23637329 . C . PASS END=23637329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:25,0 chr1 23637330 . C . PASS END=23637335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr1 23637336 . C . PASS END=23637340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,941:0,67,255:26,0 chr1 23637341 . C . PASS END=23637344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 23637345 . T . PASS END=23637345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1056:0,57,255:29,0 chr1 23637346 . T . PASS END=23637346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 23637347 . C . PASS END=23637347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:29,0 chr1 23637348 . C . PASS END=23637354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr1 23637355 . T . PASS END=23637355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr1 23637356 . G . PASS END=23637522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:33:0,80,1260:0,80,255:40,0 chr1 23637523 . C . PASS END=23637523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 23637524 . A . PASS END=23637534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 23637535 . A . PASS END=23637535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 23637536 . G . PASS END=23637559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:25,0 chr1 23637694 . G . PASS END=23637815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,102,1490:0,102,255:40,0 chr1 23640046 . C . PASS END=23640195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,5:86:99:56:0,120,1800:0,122,255:40,0 chr1 23644976 . C . PASS END=23644977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr1 23644978 . T . PASS END=23644979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,931:0,64,255:26,0 chr1 23644980 . G . PASS END=23644980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23644981 . C . PASS END=23644981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 23644982 . C . PASS END=23644982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23644983 . A . PASS END=23644983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 23644984 . T . PASS END=23644985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23644986 . A . PASS END=23644986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,851:0,34,255:24,0 chr1 23644987 . C . PASS END=23644988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 23644989 . T . PASS END=23644990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,972:0,68,255:26,0 chr1 23644991 . T . PASS END=23645001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,815:0,83,255:28,0 chr1 23645002 . C . PASS END=23645002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 23645003 . T . PASS END=23645005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:31,0 chr1 23645006 . C . PASS END=23645006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 23645007 . A . PASS END=23645008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 23645009 . A . PASS END=23645009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 23645010 . G . PASS END=23645024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1310:0,92,255:37,0 chr1 23645025 . A . PASS END=23645025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:35,0 chr1 23645026 . C . PASS END=23645026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1465:0,114,255:38,0 chr1 23645027 . T . PASS END=23645027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1239:0,64,255:35,0 chr1 23645028 . G . PASS END=23645178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,81,255:40,0 chr1 23645179 . C . PASS END=23645190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:25,0 chr1 23648021 . C . PASS END=23648156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,133,255:40,0 chr1 23650049 . C . PASS END=23650061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,909:0,62,255:26,0 chr1 23650062 . T . PASS END=23650062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 23650063 . C . PASS END=23650064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 23650065 . T . PASS END=23650065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 23650066 . G . PASS END=23650068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 23650069 . C . PASS END=23650069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:27,0 chr1 23650070 . A . PASS END=23650093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:30,0 chr1 23650094 . A . PASS END=23650094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 23650095 . A . PASS END=23650225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:31:0,87,1279:0,89,255:40,0 chr1 23660011 . C . PASS END=23660021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1219:0,89,255:34,0 chr1 23660022 . T . PASS END=23660124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1144:0,86,255:40,0 chr1 23664247 . C . PASS END=23664263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1135:0,82,255:32,0 chr1 23664264 . C . PASS END=23664264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:31,0 chr1 23664265 . A . PASS END=23664354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:32:0,80,1147:0,80,255:40,0 chr1 23664983 . C . PASS END=23664983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 23664984 . T . PASS END=23664984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 23664985 . G . PASS END=23665101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:30:0,87,1240:0,90,255:40,0 chr1 23667345 . C . PASS END=23667355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1149:0,80,255:33,0 chr1 23667356 . A . PASS END=23667356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:31,0 chr1 23667357 . T . PASS END=23667478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:83:33:0,83,1167:0,83,255:40,0 chr1 23667479 . T . PASS END=23667479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:75:46:0,75,1595:0,75,255:39,0 chr1 23667480 . T . PASS END=23667501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:40:0,91,1409:0,91,255:40,0 chr1 23688462 . T . PASS END=23688474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:26,0 chr1 23688475 . A . PASS END=23688529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,881:0,81,255:38,0 chr1 23688530 . T . PASS END=23688530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1371:0,70,255:34,0 chr1 23688531 . A . PASS END=23688615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1137:0,92,255:38,0 chr1 23688616 . C . PASS END=23688617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:26,0 chr1 23688618 . C . PASS END=23688871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1119:0,80,255:40,0 chr1 23688872 . G . PASS END=23688893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:34,0 chr1 23688894 . G . PASS END=23688908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:26:0,75,1125:0,78,255:26,0 chr1 23688909 . C T, 50.00 PASS DP=26;MQ=245.84;MQRankSum=4.295;ReadPosRankSum=3.163;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,14,0:0.538,0.000:26:4,11,0:8,3,0:48:85,0,50,406,429,835:255,0,255:12,0:5.0000e+01,6.6010e-05,5.2852e+01,4.0642e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,6,8:6,6,7,7 chr1 23688910 . A . PASS END=23688923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 23688924 . C . PASS END=23688924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 23688925 . T . PASS END=23688927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 23688928 . C . PASS END=23688928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23688929 . T . PASS END=23688929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 23688930 . G . PASS END=23688934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 23688935 . T . PASS END=23688946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:26,0 chr1 23688947 . C . PASS END=23688951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 23688952 . C . PASS END=23688953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 23688954 . C . PASS END=23688969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 23688970 . C . PASS END=23689004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,947:0,78,255:26,0 chr1 23689005 . T . PASS END=23689006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 23689007 . T . PASS END=23689011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 23689012 . C . PASS END=23689013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23689014 . G . PASS END=23689028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:25,0 chr1 23689029 . T . PASS END=23689029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 23689030 . T . PASS END=23689045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 23689046 . G . PASS END=23689048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 23689049 . T . PASS END=23689049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:22,0 chr1 23689050 . C . PASS END=23689081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,922:0,70,255:26,0 chr1 23689082 . G . PASS END=23689082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 23689083 . G A, 50.00 PASS DP=30;MQ=249.39;MQRankSum=4.635;ReadPosRankSum=1.226;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,16,0:0.533,0.000:30:10,6,0:4,10,0:48:85,0,50,517,492,1009:255,0,255:13,0:5.0000e+01,6.6527e-05,5.2766e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,8,8:7,7,10,6 chr1 23689084 . T . PASS END=23689086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 23689087 . G . PASS END=23689107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 23689108 . C . PASS END=23689114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 23689115 . C . PASS END=23689120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:31,0 chr1 23689121 . A . PASS END=23689121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 23689122 . C . PASS END=23689122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:32,0 chr1 23689123 . T . PASS END=23689703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:32:0,83,1158:0,83,255:40,0 chr1 23689704 . G . PASS END=23689704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:27,0 chr1 23689705 . A . PASS END=23689708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:29,0 chr1 23689709 . C . PASS END=23689709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 23689710 . A . PASS END=23689713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 23689714 . T . PASS END=23689714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 23693535 . C . PASS END=23693565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,599:0,41,255:19,0 chr1 23693566 . C . PASS END=23693567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23693568 . T . PASS END=23693573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23693574 . C . PASS END=23693591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,62,255:26,0 chr1 23693592 . G . PASS END=23693594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 23693595 . C . PASS END=23693617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,76,255:26,0 chr1 23693618 . T . PASS END=23693621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 23693622 . G . PASS END=23693661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,840:0,62,255:26,0 chr1 23694466 . C . PASS END=23694480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:31,0 chr1 23694481 . G . PASS END=23694481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1102:0,44,255:27,0 chr1 23694482 . A . PASS END=23694483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:28,0 chr1 23694484 . C . PASS END=23694485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 23694486 . G . PASS END=23694489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 23694490 . G . PASS END=23694498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 23707959 . T . PASS END=23708024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:64:0,120,1800:0,192,255:40,0 chr1 23710164 . T . PASS END=23710164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 23710165 . C . PASS END=23710165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 23710166 . A . PASS END=23710166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 23710167 . C . PASS END=23710169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 23710170 . G . PASS END=23710172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,798:0,50,255:23,0 chr1 23710173 . G . PASS END=23710176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,809:0,72,255:24,0 chr1 23710177 . A G, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,884,69,884:255,72,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,6:0,0,15,8 chr1 23710178 . T . PASS END=23710193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,894:0,62,255:26,0 chr1 23710194 . G . PASS END=23710198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 23710199 . A . PASS END=23710199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 23710200 . A . PASS END=23710214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1102:0,87,255:31,0 chr1 23710215 . C . PASS END=23710215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 23710216 . G . PASS END=23710234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1072:0,80,255:31,0 chr1 23710235 . T . PASS END=23710236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 23710237 . A . PASS END=23710240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 23710241 . G C, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.724;ReadPosRankSum=3.261;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,16,0:0.516,0.000:31:7,9,0:8,7,0:48:85,0,50,572,529,1101:255,0,255:13,0:5.0000e+01,6.5492e-05,5.2927e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,4,7,9:9,6,6,10 chr1 23710242 . A . PASS END=23710278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1250:0,90,255:36,0 chr1 23710279 . T . PASS END=23710353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:37,0 chr1 23710354 . A . PASS END=23710360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 23710361 . G . PASS END=23710361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23710362 . A . PASS END=23710374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,77,255:26,0 chr1 23710375 . G . PASS END=23710376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:27,0 chr1 23710377 . G . PASS END=23710377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 23710378 . A . PASS END=23710378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23710379 . A . PASS END=23710379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 23710380 . G . PASS END=23710391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 23710392 . G . PASS END=23710411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:27:0,71,1047:0,71,255:26,0 chr1 23710412 . T . PASS END=23710418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,993:0,84,255:28,0 chr1 23710419 . A . PASS END=23710420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:25,0 chr1 23710421 . G . PASS END=23710469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:35,0 chr1 23710470 . A . PASS END=23710470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1177:0,58,255:32,0 chr1 23710471 . A . PASS END=23710563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1210:0,86,255:38,0 chr1 23710564 . G . PASS END=23710564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 23710565 . T . PASS END=23710574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 23710575 . A . PASS END=23710580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:23,0 chr1 23710581 . T . PASS END=23710589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:24:0,54,810:0,72,255:19,0 chr1 23710839 . C . PASS END=23710842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,150,255:40,0 chr1 23710843 . C . PASS END=23710910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,108,1620:0,123,255:40,0 chr1 23713766 . C . PASS END=23713767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 23713768 . G . PASS END=23713790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,801:0,69,255:25,0 chr1 23713791 . T . PASS END=23713791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 23713792 . T . PASS END=23713802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,828:0,65,255:26,0 chr1 23713803 . C . PASS END=23713871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,964:0,81,255:32,0 chr1 23713872 . A . PASS END=23713872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 23713873 . T . PASS END=23713880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 23713881 . C . PASS END=23713881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:27,0 chr1 23713882 . T . PASS END=23713887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 23713888 . C . PASS END=23713912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,892:0,61,255:26,0 chr1 23720372 . C . PASS END=23720384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1205:0,87,255:34,0 chr1 23720385 . T . PASS END=23720385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:32,0 chr1 23720386 . T . PASS END=23720389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,99,1485:0,102,255:35,0 chr1 23720390 . T . PASS END=23720390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 23720391 . A . PASS END=23720392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:36,0 chr1 23720393 . A . PASS END=23720393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1296:0,59,255:35,0 chr1 23720394 . A . PASS END=23720526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1305:0,92,255:40,0 chr1 23724038 . G . PASS END=23724094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,130,255:40,0 chr1 23724285 . C . PASS END=23724294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 23724295 . C . PASS END=23724313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 23724314 . T . PASS END=23724314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 23724315 . C . PASS END=23724317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 23724318 . C . PASS END=23724318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 23724319 . A . PASS END=23724348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,543:0,41,255:17,0 chr1 23724349 . A . PASS END=23724359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 23724360 . C . PASS END=23724366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr1 23724367 . A . PASS END=23724375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,427:0,36,255:12,0 chr1 23724376 . A . PASS END=23724376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 23724377 . G . PASS END=23724405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:13,0 chr1 23724406 . A . PASS END=23724407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 23724408 . G . PASS END=23724409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 23724410 . G . LowGQ END=23724412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,412:0,0,255:11,2 chr1 23724413 . T . PASS END=23724419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:11,0 chr1 23724420 . T . PASS END=23724420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 23724421 . C . PASS END=23724438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 23724439 . G . PASS END=23724448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23730632 . T . PASS END=23730653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,99,1599:0,99,255:40,0 chr1 23735157 . C . PASS END=23735203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:45:0,114,1643:0,119,255:40,0 chr1 23735204 . G . PASS END=23735219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,104,1451:0,104,255:40,0 chr1 23743742 . C . PASS END=23743883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:34:0,91,1368:0,91,255:40,0 chr1 23744397 . C . PASS END=23744502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1307:0,98,255:40,0 chr1 23745570 . C . PASS END=23745570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 23745571 . T . PASS END=23745571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,418:0,1,255:14,0 chr1 23745572 . G . PASS END=23745572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 23745573 . T . PASS END=23745573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,447:0,1,255:14,0 chr1 23745574 . A . PASS END=23745574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 23745575 . G . PASS END=23745575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,441:0,1,255:14,0 chr1 23745576 . T . PASS END=23745581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,599:0,40,255:19,0 chr1 23745582 . G . PASS END=23745589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 23745590 . T . PASS END=23745591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 23745592 . T . PASS END=23745592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 23745593 . G . PASS END=23745593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 23745594 . G . PASS END=23745594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 23745595 . C . PASS END=23745595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 23745596 . A . PASS END=23745599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 23745600 . G . PASS END=23745600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 23745601 . T . PASS END=23745604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 23745605 . G . PASS END=23745607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr1 23745608 . T . PASS END=23745612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 23745613 . A . PASS END=23745613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 23745614 . G . PASS END=23745616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 23745617 . G . PASS END=23745632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,681:0,41,255:19,0 chr1 23751058 . C . PASS END=23751117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:36:0,81,1215:0,92,255:40,0 chr1 23751118 . C . PASS END=23751123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:54:32:0,54,810:0,85,255:19,0 chr1 23751124 . C . PASS END=23751125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,76,255:20,0 chr1 23751126 . T . PASS END=23751126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:57:31:0,57,855:0,77,255:18,0 chr1 23756349 . C . PASS END=23756423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:37:0,93,1395:0,111,255:40,0 chr1 23757528 . C . PASS END=23757528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 23757529 . G . PASS END=23757529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 23757530 . G . PASS END=23757530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 23757531 . C . PASS END=23757537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1031:0,81,255:30,0 chr1 23757538 . C . PASS END=23757538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1008:0,43,255:27,0 chr1 23757539 . T . PASS END=23757547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 23757548 . G . PASS END=23757548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 23757549 . A . PASS END=23757552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 23757553 . T . PASS END=23757553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 23757554 . G . PASS END=23757555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:30,0 chr1 23757556 . C . PASS END=23757556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 23757557 . T . PASS END=23757559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 23757560 . C . PASS END=23757560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 23757561 . T . PASS END=23757580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 23757581 . T . PASS END=23757581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 23757582 . C . PASS END=23757598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 23757599 . A . PASS END=23757618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,899:0,75,255:25,0 chr1 23758189 . C . PASS END=23758193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:19,0 chr1 23758194 . T . PASS END=23758194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 23758195 . C . PASS END=23758195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 23758196 . T . PASS END=23758201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 23758202 . G . PASS END=23758202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 23758203 . G . PASS END=23758240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,837:0,61,255:25,0 chr1 23758241 . T . PASS END=23758242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 23758243 . G . PASS END=23758244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 23758245 . T . PASS END=23758245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,62,255:18,0 chr1 23758246 . C . PASS END=23758257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:21,0 chr1 23758258 . G . PASS END=23758258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 23758259 . G . PASS END=23758272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr1 23758273 . C . PASS END=23758273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 23758274 . C . PASS END=23758278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 23758279 . T . PASS END=23758284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 23758285 . T . PASS END=23758285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:16,0 chr1 23758286 . T . PASS END=23758306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,690:0,44,255:19,0 chr1 23758307 . C . PASS END=23758309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 23758310 . C . PASS END=23758312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 23758313 . G . PASS END=23758315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23758316 . C . PASS END=23758317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 23758318 . A . PASS END=23758318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 23758319 . A . PASS END=23758320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,751:0,50,255:19,0 chr1 23758321 . G . PASS END=23758354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,868:0,66,255:25,0 chr1 23758355 . C . PASS END=23758397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,630:0,41,255:19,0 chr1 23758398 . G . PASS END=23758409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 23758410 . A . LowGQ END=23758410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 23758411 . T . PASS END=23758411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 23759570 . C . PASS END=23759576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 23759577 . G . PASS END=23759577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 23759578 . G . PASS END=23759582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:25,0 chr1 23759583 . T . PASS END=23759583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 23759584 . C . PASS END=23759585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 23759586 . T . PASS END=23759586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 23759587 . G . PASS END=23759587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 23759588 . C . PASS END=23759588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 23759589 . A . PASS END=23759591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 23759592 . C . PASS END=23759600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 23759601 . C . PASS END=23759601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr1 23759602 . A . PASS END=23759614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 23759615 . A . PASS END=23759615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 23759616 . G . PASS END=23759620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 23759621 . T . PASS END=23759621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 23759622 . G . PASS END=23759650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1157:0,80,255:32,0 chr1 23759651 . T . PASS END=23759651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1164:0,66,255:29,0 chr1 23759652 . C . PASS END=23759665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:31,0 chr1 23759666 . T . PASS END=23759666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 23759667 . G . PASS END=23759676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 23759677 . A . PASS END=23759677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr1 23759678 . G . PASS END=23759683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 23759684 . C . PASS END=23759684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 23759685 . G . PASS END=23759686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23759687 . C . PASS END=23759692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1041:0,73,255:26,0 chr1 23759693 . C . PASS END=23759706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1056:0,90,255:30,0 chr1 23759707 . C . PASS END=23759707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 23759708 . T . PASS END=23759710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 23759711 . T . PASS END=23759711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1064:0,65,255:29,0 chr1 23759712 . G . PASS END=23759727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 23759728 . G . PASS END=23759728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 23759729 . C . PASS END=23759730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 23759731 . C . PASS END=23759731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1033:0,63,255:28,0 chr1 23759732 . A . PASS END=23759733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr1 23759734 . T . PASS END=23759765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,929:0,62,255:26,0 chr1 23759855 . C . PASS END=23759863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1316:0,81,255:37,0 chr1 23759864 . T . PASS END=23759864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1312:0,70,255:35,0 chr1 23759865 . C . PASS END=23760004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,89,255:40,0 chr1 23760005 . C . PASS END=23760008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 23760009 . G . PASS END=23760011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 23760012 . T . PASS END=23760025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,908:0,61,255:24,0 chr1 23760119 . C . PASS END=23760168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1158:0,83,255:35,0 chr1 23760169 . T . PASS END=23760169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:27,0 chr1 23760170 . C . PASS END=23760175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 23760176 . T . PASS END=23760177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 23760178 . C . PASS END=23760178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:24,0 chr1 23760179 . T . PASS END=23760186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1039:0,71,255:25,0 chr1 23760747 . C . PASS END=23760794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1217:0,89,255:40,0 chr1 23760795 . G . PASS END=23760795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:40,0 chr1 23760796 . C . PASS END=23760797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1523:0,90,255:40,0 chr1 23760798 . G . PASS END=23760798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:40,0 chr1 23760799 . G . PASS END=23760856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,83,255:40,0 chr1 23760857 . T . PASS END=23760859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 23760860 . C . PASS END=23760860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23760861 . C . PASS END=23760861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 23760862 . A . PASS END=23760862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23761026 . C . PASS END=23761111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:37:0,92,1269:0,92,255:40,0 chr1 23762302 . T . PASS END=23762484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1072:0,83,255:40,0 chr1 23762485 . C . PASS END=23762507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:26,0 chr1 23762508 . C . PASS END=23762510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 23762511 . T . PASS END=23762511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,627:0,27,255:16,0 chr1 23762512 . G . PASS END=23762521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:18,0 chr1 23763053 . A . PASS END=23763121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:33:0,88,1136:0,88,255:39,0 chr1 23763122 . C . PASS END=23763122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:34,0 chr1 23763123 . T . PASS END=23763147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1272:0,94,255:35,0 chr1 23763404 . C . PASS END=23763412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:16,0 chr1 23763413 . G . PASS END=23763415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,468:0,31,255:15,0 chr1 23763416 . G . PASS END=23763418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,523:0,48,255:17,0 chr1 23763419 . G . PASS END=23763419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:15,0 chr1 23763420 . C . PASS END=23763421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr1 23763422 . C . PASS END=23763422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 23763423 . A . PASS END=23763426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 23763427 . G . PASS END=23763427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr1 23763428 . G . PASS END=23763430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 23763431 . C . PASS END=23763431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr1 23763432 . A . PASS END=23763432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 23763433 . A . PASS END=23763433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,615:0,30,255:18,0 chr1 23763434 . G . PASS END=23763436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 23763437 . G . PASS END=23763437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 23763438 . A . PASS END=23763441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23763442 . A . PASS END=23763442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 23763443 . C . PASS END=23763443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23763444 . T . PASS END=23763444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:20,0 chr1 23763445 . G . PASS END=23763446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:22,0 chr1 23763447 . A . PASS END=23763447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 23763448 . T . PASS END=23763448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,695:0,66,255:22,0 chr1 23763449 . G . PASS END=23763449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 23763450 . C . PASS END=23763450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 23763451 . G . PASS END=23763451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 23763452 . C . PASS END=23763452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 23763453 . G . PASS END=23763453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 23763454 . A . PASS END=23763455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 23763456 . A . PASS END=23763456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 23763457 . A . PASS END=23763457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,717:0,66,255:22,0 chr1 23763458 . G . PASS END=23763458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:22,0 chr1 23763459 . C . PASS END=23763460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr1 23763461 . C . PASS END=23763461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 23763462 . A . PASS END=23763462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 23763463 . C . PASS END=23763463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 23763464 . G . PASS END=23763481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:23,0 chr1 23763482 . G . PASS END=23763482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 23763483 . C . PASS END=23763488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 23763489 . C . PASS END=23763489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 23763490 . A . PASS END=23763503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,884:0,69,255:24,0 chr1 23763504 . A . PASS END=23763504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 23763505 . G . PASS END=23763506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 23763507 . A . PASS END=23763507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:21,0 chr1 23763508 . C . PASS END=23763514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,68,255:22,0 chr1 23763515 . G . PASS END=23763515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 23763516 . T . PASS END=23763531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:43:16:0,43,582:0,43,255:20,0 chr1 23763532 . T . PASS END=23763532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 23763533 . G . PASS END=23763534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 23763535 . G . PASS END=23763535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 23763536 . G . PASS END=23763537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 23763623 . C . PASS END=23763645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:18,0 chr1 23763646 . T . PASS END=23763646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 23763647 . G . PASS END=23763657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 23763658 . G . PASS END=23763658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 23763659 . G . PASS END=23763661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23763662 . T . PASS END=23763663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 23763664 . C . PASS END=23763679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 23763680 . T . PASS END=23763680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 23763681 . G . PASS END=23763688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,830:0,61,255:24,0 chr1 23763689 . T . PASS END=23763693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23763694 . A . PASS END=23763695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 23763696 . G . PASS END=23763701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23763702 . C . PASS END=23763730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 23763731 . A . PASS END=23763732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 23763733 . G . PASS END=23763763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 23763764 . A . PASS END=23763765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 23763766 . G . PASS END=23763766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23763767 . C . PASS END=23763770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23763771 . G . PASS END=23763771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23763772 . C . PASS END=23763772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23763773 . T . PASS END=23763780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:21,0 chr1 23763781 . T . PASS END=23763781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr1 23763782 . C . PASS END=23763800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,770:0,62,255:24,0 chr1 23763801 . C . PASS END=23763801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 23763802 . A . PASS END=23763812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 23763813 . C . PASS END=23763813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 23763917 . G . PASS END=23763965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:28:0,83,1063:0,83,255:34,0 chr1 23765240 . G . PASS END=23765256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,798:0,63,255:25,0 chr1 23765257 . C . PASS END=23765257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:24,0 chr1 23765258 . A . PASS END=23765267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:27,0 chr1 23765268 . C . PASS END=23765270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 23765271 . A . PASS END=23765272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 23765273 . G . PASS END=23765274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 23765275 . T . PASS END=23765282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1022:0,68,255:26,0 chr1 23765283 . C . PASS END=23765285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23765286 . T . PASS END=23765286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 23765287 . T . PASS END=23765293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 23765294 . T . PASS END=23765294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 23765295 . C . PASS END=23765298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 23765299 . A . PASS END=23765299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 23765300 . G . PASS END=23765302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 23765303 . T . PASS END=23765327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 23765654 . C . PASS END=23765723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,108,1558:0,108,255:40,1 chr1 23767595 . C . PASS END=23767710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,120,1800:0,132,255:40,0 chr1 23767880 . C . PASS END=23767900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1066:0,93,255:35,0 chr1 23767901 . T . PASS END=23767901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1133:0,50,255:32,0 chr1 23767902 . G . PASS END=23767966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:33:0,93,1333:0,95,255:40,0 chr1 23768148 . T . PASS END=23768223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,116,1723:0,116,255:40,0 chr1 23768679 . T . PASS END=23768764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:47:0,105,1575:0,111,255:40,0 chr1 23768994 . C . PASS END=23769001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 23769002 . T . PASS END=23769002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr1 23769003 . G . PASS END=23769010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,961:0,72,255:26,0 chr1 23769011 . G . PASS END=23769015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 23769016 . A . PASS END=23769017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,915:0,64,255:26,0 chr1 23769018 . G . PASS END=23769019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23769020 . G . PASS END=23769020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 23769021 . C . PASS END=23769021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23769022 . C . PASS END=23769022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 23769023 . G . PASS END=23769023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 23769024 . C . PASS END=23769024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 23769025 . T . PASS END=23769025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,840:0,29,255:25,0 chr1 23769026 . C . PASS END=23769031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 23769032 . G . PASS END=23769032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:29,0 chr1 23769033 . C . PASS END=23769116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1144:0,83,255:38,0 chr1 23769117 . G . PASS END=23769117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr1 23769118 . G . PASS END=23769119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:29,0 chr1 23769120 . A . PASS END=23769120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 23769121 . A . PASS END=23769127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 23769128 . C . PASS END=23769128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 23777972 . A . PASS END=23778003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1272:0,92,255:40,0 chr1 23778004 . C G, 46.11 PASS DP=36;MQ=250.00;MQRankSum=4.981;ReadPosRankSum=4.300;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,14,0:0.389,0.000:36:9,6,0:13,8,0:45:81,0,50,493,779,1272:255,0,255:20,0:4.6107e+01,1.2814e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,5,9:9,13,5,9 chr1 23778005 . A . PASS END=23778021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1236:0,92,255:35,0 chr1 23779190 . C . PASS END=23779264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,127,255:40,0 chr1 23782374 . C . PASS END=23782519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:32:0,82,1127:0,82,255:40,0 chr1 23782615 . C . PASS END=23782620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1258:0,102,255:34,0 chr1 23782621 . C T, 49.26 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=4.336;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:9,6,0:10,9,0:47:84,0,47,184,184,184:255,0,255:18,0:4.9259e+01,9.5003e-05,5.0000e+01,1.8403e+02,2.1880e+02,1.8704e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,13,8,7:10,9,13,2 chr1 23782622 . G . PASS END=23782658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1350:0,81,255:38,0 chr1 23782659 . T . PASS END=23782664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 23782665 . A . PASS END=23782687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,925:0,65,255:26,0 chr1 23810498 . C . PASS END=23810499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 23810500 . C . PASS END=23810503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 23810504 . C . PASS END=23810505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23810506 . G . PASS END=23810506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 23810507 . C . LowGQ END=23810507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,294:9,0,255:8,0 chr1 23810508 . G . PASS END=23810515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23810516 . C . PASS END=23810516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 23810517 . G . PASS END=23810519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 23810520 . C . PASS END=23810520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 23810521 . C . PASS END=23810531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,374:0,33,255:12,0 chr1 23810532 . G . PASS END=23810532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 23810533 . G . PASS END=23810546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:12,0 chr1 23810547 . A . PASS END=23810547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 23810548 . A . PASS END=23810553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 23810554 . C . PASS END=23810554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 23810555 . G . PASS END=23810563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,437:0,36,255:13,0 chr1 23810564 . C . PASS END=23810565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 23810566 . G . PASS END=23810566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 23810567 . G . PASS END=23810567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 23810568 . G . PASS END=23810588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:14,0 chr1 23810589 . A . PASS END=23810590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 23810591 . G . PASS END=23810591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 23810592 . G . PASS END=23810614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 23810615 . C . PASS END=23810626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 23810965 . C . PASS END=23810967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 23810968 . T . PASS END=23810968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,543:0,13,255:18,0 chr1 23810969 . G . PASS END=23810970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 23810971 . C . LowGQ END=23810971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,590:28,0,255:19,0 chr1 23810972 . C . PASS END=23810972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 23810973 . T . PASS END=23810973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,621:0,33,255:20,0 chr1 23810974 . C . PASS END=23810974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 23810975 . A . PASS END=23810975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 23810976 . G . PASS END=23810976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:20,0 chr1 23810977 . T . PASS END=23810980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:65:22:0,65,651:0,65,255:22,0 chr1 23810981 . A . PASS END=23810981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 23810982 . A . PASS END=23810983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr1 23810984 . T . PASS END=23810984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr1 23810985 . C . PASS END=23810985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,657:0,16,255:19,0 chr1 23810986 . C . PASS END=23810986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 23810987 . T . PASS END=23810987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,683:0,27,255:21,0 chr1 23810988 . C . PASS END=23810988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 23810989 . C . PASS END=23810989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 23810990 . G . PASS END=23810990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,644:0,19,255:20,0 chr1 23810991 . C . PASS END=23810991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 23810992 . C . PASS END=23810993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:11:22:0,11,643:0,11,255:19,1 chr1 23810994 . T . PASS END=23810994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23810995 . C . PASS END=23810995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:19,0 chr1 23810996 . C . PASS END=23810997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 23810998 . C . PASS END=23810999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23811000 . A . LowGQ END=23811001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,566:6,0,255:19,1 chr1 23811002 . C . PASS END=23811002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:20,0 chr1 23811003 . C . PASS END=23811004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 23811005 . T . PASS END=23811005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,629:0,11,255:19,0 chr1 23811006 . G . PASS END=23811006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 23811007 . C . PASS END=23811007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 23811008 . C . PASS END=23811008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:19,0 chr1 23811009 . C . PASS END=23811010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 23811011 . T . PASS END=23811011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr1 23811012 . T . PASS END=23811015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 23811016 . G . PASS END=23811016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 23811017 . G . PASS END=23811018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 23811019 . T . PASS END=23811019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 23811020 . C . PASS END=23811020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 23811021 . T . PASS END=23811021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,739:0,38,255:22,0 chr1 23811022 . G . PASS END=23811022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 23811023 . T . PASS END=23811023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 23811024 . C . PASS END=23811024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:21,0 chr1 23811025 . C . PASS END=23811026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:22,0 chr1 23811027 . G . PASS END=23811027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:21,0 chr1 23811028 . T . PASS END=23811029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,758:0,50,255:22,0 chr1 23811030 . T . PASS END=23811030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 23811031 . C . PASS END=23811031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:22,0 chr1 23811032 . A . PASS END=23811033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 23832670 . T . PASS END=23832677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1402:0,101,255:37,0 chr1 23836372 . T . PASS END=23836422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,551:0,45,255:19,0 chr1 23836423 . G . PASS END=23836435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 23836436 . T . PASS END=23836436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 23836437 . C . PASS END=23836449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 23836450 . G . PASS END=23836450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr1 23836451 . T . PASS END=23836456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 23836457 . T . PASS END=23836457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 23836458 . C . PASS END=23836459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 23836460 . T . PASS END=23836460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 23836461 . G . PASS END=23836476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 23836477 . G . PASS END=23836545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:19,0 chr1 23836546 . T . PASS END=23836565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 23836566 . G . PASS END=23836599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 23836600 . A . PASS END=23836602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 23836603 . C . PASS END=23836604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 23836605 . G . PASS END=23836619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 23836620 . G . PASS END=23836622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 23836623 . T . PASS END=23836640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 23842827 . C . PASS END=23842834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 23842835 . G . PASS END=23842836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 23842837 . T . PASS END=23842849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 23842850 . A . PASS END=23842883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,615:0,45,255:18,0 chr1 23842884 . A . PASS END=23842952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:23,0 chr1 23842953 . C . PASS END=23842955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23842956 . C . PASS END=23842965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 23842966 . C . PASS END=23842971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23842972 . G . PASS END=23842972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23842973 . A . PASS END=23842991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:18,0 chr1 23842992 . T . PASS END=23842997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 23842998 . T . PASS END=23842998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 23842999 . G . PASS END=23843001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 23843002 . A . PASS END=23843004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 23843005 . T . PASS END=23843005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 23843006 . A . PASS END=23843014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 23843015 . T . PASS END=23843019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 23845508 . C . PASS END=23845509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 23845510 . C . PASS END=23845510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 23845511 . A . PASS END=23845622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1055:0,84,255:40,0 chr1 23847405 . C . PASS END=23847407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:20,0 chr1 23847408 . T . PASS END=23847424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:26,0 chr1 23847425 . A . PASS END=23847441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:29,0 chr1 23847442 . T . PASS END=23847443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 23847444 . A . PASS END=23847473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1109:0,82,255:38,0 chr1 23847474 . G . PASS END=23847474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 23847475 . C . PASS END=23847541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:32:0,83,1216:0,83,255:39,0 chr1 23847542 . G . PASS END=23847559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,65,255:26,0 chr1 23847560 . G . PASS END=23847563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 23848064 . C . PASS END=23848077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,119,1613:0,119,255:40,0 chr1 23848329 . A . PASS END=23848337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 23848338 . A . PASS END=23848338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 23848339 . T . PASS END=23848352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 23848353 . T . PASS END=23848355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,675:0,60,255:20,0 chr1 23848356 . T . PASS END=23848357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr1 23848358 . G . PASS END=23848358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 23848359 . C . PASS END=23848359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 23848360 . G . PASS END=23848360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23848361 . G . PASS END=23848362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:19,0 chr1 23848363 . T . PASS END=23848363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23848364 . G . PASS END=23848370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 23848371 . A . PASS END=23848379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 23848380 . A . PASS END=23848385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23848386 . T . PASS END=23848389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23848390 . T . PASS END=23848390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 23848391 . G . PASS END=23848405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 23848406 . C . PASS END=23848408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 23848409 . C . PASS END=23848423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 23848424 . C . PASS END=23848433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 23848434 . G . PASS END=23848442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 23848443 . A . PASS END=23848444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 23848445 . G . PASS END=23848451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 23848452 . A . PASS END=23848452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 23848453 . C . PASS END=23848453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 23848454 . C . PASS END=23848454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 23848455 . C . PASS END=23848460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23848461 . T . PASS END=23848461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 23848462 . C . PASS END=23848462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23848463 . T . PASS END=23848463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 23848464 . G . PASS END=23848474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 23848475 . G . PASS END=23848475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 23848476 . A . PASS END=23848480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 23848481 . A . PASS END=23848481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 23848482 . A . PASS END=23848484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 23848485 . A . PASS END=23848519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,631:0,40,255:19,0 chr1 23848520 . C . PASS END=23848520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 23848521 . C . PASS END=23848521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 23848522 . G . PASS END=23848522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 23848523 . A . PASS END=23848527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 23848528 . T . PASS END=23848528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:15,0 chr1 23848529 . C . PASS END=23848537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 23848538 . G . PASS END=23848538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 23848539 . G . PASS END=23848542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 23848543 . T . PASS END=23848543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 23848544 . G . PASS END=23848548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 23850875 . T . PASS END=23850875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 23850876 . T . PASS END=23850876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 23850877 . T . PASS END=23850878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 23850879 . G . PASS END=23850881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23850882 . G . PASS END=23850884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 23850885 . G . PASS END=23850885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 23850886 . G . PASS END=23850888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 23850889 . A . PASS END=23850889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 23850890 . G . PASS END=23850891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 23850892 . C . PASS END=23850893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr1 23850894 . A . PASS END=23850894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr1 23850895 . T . PASS END=23850895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 23850896 . C . PASS END=23850896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 23850897 . C . PASS END=23850897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 23850898 . A . PASS END=23850898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 23850899 . C . PASS END=23850900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 23850901 . C . PASS END=23850901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 23850902 . T . PASS END=23850907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 23850908 . A . PASS END=23850908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 23850909 . C . PASS END=23850912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,637:0,41,255:18,0 chr1 23850913 . C . PASS END=23850913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 23850914 . C . PASS END=23850915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 23850916 . T . PASS END=23850919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23850920 . G . PASS END=23850921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23850922 . G . PASS END=23850978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,746:0,63,255:26,0 chr1 23850979 . G . PASS END=23850979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 23850980 . C . PASS END=23850980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 23857034 . C . PASS END=23857035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 23857036 . G . PASS END=23857037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 23857038 . A . PASS END=23857041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr1 23857042 . G . PASS END=23857042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 23857043 . G . PASS END=23857047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,470:0,45,255:15,0 chr1 23857048 . C . PASS END=23857048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 23857049 . C . PASS END=23857059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,501:0,45,255:17,0 chr1 23857060 . G . PASS END=23857060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 23857061 . C . PASS END=23857061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,523:0,15,255:17,0 chr1 23857062 . A . PASS END=23857073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,554:0,40,255:19,0 chr1 23857074 . T . PASS END=23857074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,560:0,27,255:17,0 chr1 23857075 . C . PASS END=23857077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,658:0,43,255:18,0 chr1 23857078 . G . PASS END=23857078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23857079 . T . PASS END=23857079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:19,0 chr1 23857080 . C . PASS END=23857089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:22,0 chr1 23857090 . T . PASS END=23857092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 23857093 . C . PASS END=23857095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 23857096 . C . PASS END=23857096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 23857097 . G . PASS END=23857101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 23857102 . A . PASS END=23857102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:21,0 chr1 23857103 . G . PASS END=23857133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:22,0 chr1 23857134 . T . PASS END=23857147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr1 23857148 . T . PASS END=23857148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,681:0,8,255:13,0 chr1 23857149 . G . PASS END=23857156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,40,255:13,0 chr1 23857157 . G . PASS END=23857157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:13,0 chr1 23857158 . G . PASS END=23857158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 23857159 . T . PASS END=23857159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 23857160 . A . PASS END=23857162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 23857163 . A . PASS END=23857204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 23857205 . C . PASS END=23857232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,266:0,24,255:9,0 chr1 23857233 . A . PASS END=23857233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 23857234 . C . PASS END=23857238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 23857239 . G . PASS END=23857256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,194:0,15,194:6,0 chr1 23857257 . G . LowGQ END=23857257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 23857258 . A . PASS END=23857258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 23857259 . A . LowGQ END=23857259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 23857260 . G . PASS END=23857263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:6,0 chr1 23857264 . A . PASS END=23857264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 23857265 . G . PASS END=23857273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 23857274 . C . LowGQ END=23857274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:13,0,168:5,0 chr1 23857275 . C . PASS END=23857283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 23857284 . A . PASS END=23857284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 23857285 . T . PASS END=23857285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 23885451 . T . PASS END=23885454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 23885455 . T . PASS END=23885455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 23885456 . G . PASS END=23885459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 23885460 . A . PASS END=23885460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 23885461 . A . PASS END=23885471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 23885472 . G . PASS END=23885472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 23885473 . T . PASS END=23885475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23885476 . T . PASS END=23885476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 23885477 . T . PASS END=23885479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23885480 . A C, 41.35 PASS DP=21;MQ=249.67;MQRankSum=2.297;ReadPosRankSum=-0.817;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,6,0:0.286,0.000:21:10,4,0:5,2,0:41:76,0,50,215,528,743:170,0,255:14,0:4.1348e+01,3.4015e-04,5.3000e+01,2.1471e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,5,1:7,8,5,1 chr1 23885481 . G . PASS END=23885484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 23885485 . A . PASS END=23885485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 23885486 . C . PASS END=23885486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 23885487 . A . PASS END=23885488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 23885489 . G . PASS END=23885495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23885496 . A . PASS END=23885497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 23885498 . T C, 107.19 PASS DP=20;MQ=249.65;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,13,0:0,7,0:57:145,60,0,760,60,760:255,60,0:0,0:1.0719e+02,5.7188e+01,8.2835e-06,4.5000e+02,9.1958e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,8:0,0,11,9 chr1 23885499 . G . PASS END=23885510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,698:0,47,255:19,0 chr1 23885618 . C . PASS END=23885636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 23885637 . C . PASS END=23885639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 23885640 . T . PASS END=23885646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 23885647 . G . PASS END=23885700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:17,0 chr1 23885701 . C . PASS END=23885701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 23885702 . G . PASS END=23885731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 23885732 . A . PASS END=23885766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,32,255:13,0 chr1 23885767 . G . PASS END=23885768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 23885769 . C . PASS END=23885771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 23885772 . G . PASS END=23885913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,620:0,45,255:19,0 chr1 23885914 . T . PASS END=23885917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 23956045 . A . PASS END=23956047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 23965599 . C . PASS END=23965702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:35:0,90,1212:0,90,255:40,0 chr1 23965703 . T . PASS END=23965703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 23965704 . A . PASS END=23965729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:35,0 chr1 23965730 . G . PASS END=23965733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 23965734 . A . PASS END=23965734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,942:0,59,255:23,0 chr1 23965735 . G . PASS END=23965741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,74,255:25,0 chr1 23966170 . C . PASS END=23966176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 23966177 . G . PASS END=23966177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 23966178 . T . PASS END=23966178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 23966179 . T . PASS END=23966195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:19,0 chr1 23966196 . C . PASS END=23966201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 23966202 . G . PASS END=23966260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,623:0,44,255:19,0 chr1 23966261 . C . PASS END=23966281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,482:0,39,255:13,0 chr1 23966282 . G . PASS END=23966285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 23966879 . A . PASS END=23966879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 23966880 . G . PASS END=23966891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 23966892 . T . PASS END=23966894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 23966895 . A . PASS END=23966912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 23966913 . T . PASS END=23966913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr1 23966914 . C . PASS END=23966929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 23966930 . A . PASS END=23966932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 23966933 . A . PASS END=23966933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 23966934 . C . PASS END=23966965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:18,0 chr1 23966966 . G . PASS END=23966966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 23966967 . G . PASS END=23966975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 23966976 . C . PASS END=23966995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr1 23966996 . A . PASS END=23966996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 23966997 . C . PASS END=23966999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 23967000 . T . PASS END=23967009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 23967010 . C . PASS END=23967016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 23967017 . G . PASS END=23967018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 23967019 . C . PASS END=23967032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:6:0,15,225:0,18,233:6,0 chr1 23967033 . G . PASS END=23967039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 24018300 . T . PASS END=24018300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 24018314 . A . PASS END=24018314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 24018315 . T . PASS END=24018376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:36:0,91,1440:0,91,255:40,0 chr1 24018377 . G . PASS END=24018377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:30,0 chr1 24018378 . A . PASS END=24018400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,89,255:35,0 chr1 24018401 . G . PASS END=24018401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 24018402 . C . PASS END=24018406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:29,0 chr1 24018407 . C . PASS END=24018416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,77,255:26,0 chr1 24018417 . G . PASS END=24018422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:28,0 chr1 24018423 . C . PASS END=24018423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 24018424 . G . PASS END=24018437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 24018438 . C . PASS END=24018448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:25,0 chr1 24019098 . G . PASS END=24019221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1123:0,92,255:40,0 chr1 24019222 . A . PASS END=24019237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,914:0,62,255:26,0 chr1 24019238 . T . PASS END=24019238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:22,0 chr1 24019239 . G . PASS END=24019242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr1 24019243 . T . PASS END=24019243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 24019244 . C . PASS END=24019245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 24019246 . A . PASS END=24019246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 24019247 . A . PASS END=24019247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 24019248 . A . PASS END=24019248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 24019249 . G . PASS END=24019249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 24020290 . C . PASS END=24020290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 24020296 . G . PASS END=24020390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1157:0,93,255:40,0 chr1 24020391 . G . PASS END=24020393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:32:0,66,990:0,96,255:22,0 chr1 24020394 . G . PASS END=24020394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:20,0 chr1 24020395 . G . PASS END=24020404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:21,0 chr1 24020412 . A . PASS END=24020412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24021150 . G . PASS END=24021228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:33:0,83,1194:0,83,255:40,0 chr1 24021229 . T . PASS END=24021229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1480:0,77,255:37,0 chr1 24021230 . G . PASS END=24021269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1241:0,84,255:39,0 chr1 24021270 . G . PASS END=24021281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,71,255:25,0 chr1 24022288 . G . PASS END=24022390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:97:33:0,97,1271:0,97,255:40,0 chr1 24022391 . A . PASS END=24022391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1449:0,76,255:36,0 chr1 24022392 . G . PASS END=24022398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,105,1451:0,107,255:38,0 chr1 24022832 . A . PASS END=24022832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr1 24022834 . T . PASS END=24022863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:81:0,120,1800:0,204,255:40,0 chr1 24069916 . A . PASS END=24069924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 24069925 . G . PASS END=24069935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 24069936 . C . LowGQ END=24069936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 24069937 . G . PASS END=24069950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 24069951 . A . PASS END=24069959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 24069960 . C . PASS END=24069960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 24069961 . A . PASS END=24069984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 24069985 . G . PASS END=24070016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 24070017 . A . PASS END=24070017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,333:0,2,255:10,0 chr1 24070018 . G . PASS END=24070019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 24070020 . T . PASS END=24070020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 24070021 . G . PASS END=24070054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr1 24070055 . C . PASS END=24070068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 24075511 . C . PASS END=24075567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:81:0,120,1800:0,212,255:40,0 chr1 24076332 . G . PASS END=24076428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,86,255:40,0 chr1 24076429 . C . PASS END=24076438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:28:0,60,900:0,80,255:25,0 chr1 24077335 . A . PASS END=24077460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1178:0,83,255:40,0 chr1 24077461 . A . PASS END=24077461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:34,0 chr1 24077462 . T . PASS END=24077511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1325:0,98,255:36,0 chr1 24077512 . C . PASS END=24077512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:35,0 chr1 24077513 . G . PASS END=24077566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:35:0,91,1242:0,91,255:39,0 chr1 24077567 . T . PASS END=24077567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1113:0,60,255:33,0 chr1 24077568 . G . PASS END=24077618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1195:0,88,255:37,0 chr1 24077619 . G . PASS END=24077619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 24077620 . C . PASS END=24077646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1341:0,87,255:37,0 chr1 24077647 . C . PASS END=24077648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:32,0 chr1 24077649 . G . PASS END=24077684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1305:0,93,255:37,0 chr1 24077685 . T . PASS END=24077701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 24077702 . C . PASS END=24077702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 24077703 . C . PASS END=24077707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 24077708 . G . PASS END=24077717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 24077718 . A . PASS END=24077732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,894:0,64,255:26,0 chr1 24077733 . G . PASS END=24077747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 24077748 . T . PASS END=24077748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1121:0,63,255:31,0 chr1 24077749 . T . PASS END=24078179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:83:34:0,83,1305:0,83,255:40,0 chr1 24078180 . A . PASS END=24078180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1422:0,77,255:40,0 chr1 24078181 . A . PASS END=24078520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:88:37:0,88,1248:0,88,255:40,0 chr1 24078897 . G . PASS END=24079006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,108,1620:0,114,255:40,0 chr1 24079007 . A . PASS END=24079007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:35,0 chr1 24079008 . G . PASS END=24079008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 24080590 . C . PASS END=24080739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1215:0,84,255:40,0 chr1 24080740 . T . PASS END=24080740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1248:0,73,255:36,0 chr1 24080741 . C . PASS END=24080745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:40:0,90,1329:0,90,255:39,0 chr1 24080853 . C . PASS END=24080939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:37:0,84,1260:0,84,255:40,0 chr1 24080940 . A . PASS END=24080950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:28:0,66,990:0,68,255:26,0 chr1 24082333 . G . PASS END=24082333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:34:40:0,34,1264:0,34,255:36,0 chr1 24082334 . T . PASS END=24082513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1260:0,90,255:40,0 chr1 24082764 . G . PASS END=24082780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr1 24082781 . G . PASS END=24082816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:26,0 chr1 24082817 . G . PASS END=24082824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr1 24082825 . G . PASS END=24082825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 24082826 . A . PASS END=24082850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:30,0 chr1 24082851 . G . PASS END=24082875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 24083443 . G . PASS END=24083454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,474:0,42,255:17,0 chr1 24083455 . C . PASS END=24083455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 24083456 . C . PASS END=24083456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 24083457 . C . PASS END=24083462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,738:0,63,255:21,0 chr1 24083463 . C . PASS END=24083463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 24083464 . C . PASS END=24083464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 24083465 . A . PASS END=24083465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 24083466 . T . PASS END=24083479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:26,0 chr1 24083480 . G . PASS END=24083488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr1 24083489 . A . PASS END=24083489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 24083490 . G . PASS END=24083492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 24083493 . G . PASS END=24083493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 24083494 . C . PASS END=24083503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:31,0 chr1 24083504 . A . PASS END=24083504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:29,0 chr1 24083505 . A . PASS END=24083509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1125:0,93,255:31,0 chr1 24083510 . A . PASS END=24083510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 24083511 . G . PASS END=24083557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1086:0,86,255:33,0 chr1 24083558 . T . PASS END=24083583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 24083584 . T . PASS END=24083592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:19,0 chr1 24083593 . T . PASS END=24083604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:16:0,36,540:0,48,255:13,0 chr1 24083605 . C . PASS END=24083606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 24083607 . C . PASS END=24083612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:13,0 chr1 24083613 . A . PASS END=24083613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 24083614 . G . PASS END=24083614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 24083615 . A . PASS END=24083615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:9,0 chr1 24086002 . A . PASS END=24086063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:38:0,98,1312:0,98,255:40,0 chr1 24105006 . A . PASS END=24105015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 24105016 . G . PASS END=24105022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 24105023 . C . PASS END=24105023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 24105024 . C . PASS END=24105061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr1 24105062 . G . PASS END=24105085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 24105086 . G . PASS END=24105098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr1 24105099 . T . PASS END=24105099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 24105100 . A . PASS END=24105100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 24105101 . C . PASS END=24105108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 24105109 . T . PASS END=24105123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 24105124 . T . PASS END=24105124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 24105125 . G . PASS END=24105126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 24105127 . A . PASS END=24105127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 24105128 . A . PASS END=24105128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 24105129 . T . PASS END=24105129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 24105130 . G . PASS END=24105133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 24105134 . T . PASS END=24105134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 24105135 . A . PASS END=24105135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 24105136 . A . PASS END=24105136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 24105137 . C . PASS END=24105140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 24105141 . A . LowGQ END=24105141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,364:3,0,255:10,0 chr1 24105142 . G . PASS END=24105152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr1 24105153 . A . PASS END=24105153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,341:0,2,255:9,0 chr1 24105154 . G . PASS END=24105155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 24105156 . G . PASS END=24105177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 24105178 . G . PASS END=24105178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:7,0 chr1 24105179 . G . PASS END=24105195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 24105196 . G . PASS END=24105198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr1 24105199 . C . PASS END=24105203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 24105928 . T . PASS END=24105971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:42:0,90,1087:0,90,255:40,0 chr1 24106354 . A . PASS END=24106428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:36:0,87,1305:0,99,255:40,0 chr1 24106429 . A . PASS END=24106431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 24112165 . G . PASS END=24112269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:33:0,96,1378:0,98,255:40,0 chr1 24112805 . A . PASS END=24112908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1215:0,82,255:40,0 chr1 24112909 . C . PASS END=24112911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:23,0 chr1 24112912 . A . PASS END=24112912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:21,0 chr1 24112913 . G . PASS END=24112913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 24113765 . C . PASS END=24113838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1170:0,83,255:35,0 chr1 24113839 . T . PASS END=24113866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,68,255:26,0 chr1 24119137 . A . PASS END=24119137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 24119138 . T . PASS END=24119139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 24119140 . T . PASS END=24119140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr1 24119141 . A . PASS END=24119141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr1 24119142 . T . PASS END=24119142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:30,0 chr1 24119143 . G . PASS END=24119154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1172:0,85,255:34,0 chr1 24119155 . C . PASS END=24119155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr1 24119156 . G . PASS END=24119243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1141:0,81,255:40,0 chr1 24119244 . G . PASS END=24119244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24119245 . G . PASS END=24119246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 24119247 . C . PASS END=24119250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:24,0 chr1 24119498 . G . PASS END=24119500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 24119501 . A . PASS END=24119501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 24119502 . T . PASS END=24119512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1050:0,93,255:31,0 chr1 24119513 . G . PASS END=24119517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,80,255:26,0 chr1 24119518 . T . PASS END=24119526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:30,0 chr1 24119527 . A . PASS END=24119528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1047:0,74,255:28,0 chr1 24119529 . G . PASS END=24119529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24119641 . G . PASS END=24119686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:25,0 chr1 24119687 . A . PASS END=24119693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:19,0 chr1 24119694 . T . PASS END=24119694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,754:0,38,255:15,0 chr1 24119695 . C . PASS END=24119700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:15,0 chr1 24119701 . C . PASS END=24119703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 24119704 . T . PASS END=24119706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 24120195 . G . PASS END=24120202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 24120203 . T . PASS END=24120203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 24120204 . C . PASS END=24120206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 24120207 . T . PASS END=24120207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 24120208 . G . PASS END=24120209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 24120210 . G . PASS END=24120210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 24120211 . A . PASS END=24120222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:17,0 chr1 24120223 . A . PASS END=24120223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:16,0 chr1 24120224 . A . PASS END=24120224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 24120225 . G . PASS END=24120225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 24120226 . A . PASS END=24120226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 24120227 . T . PASS END=24120227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:16,0 chr1 24120228 . G . PASS END=24120231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 24120232 . A . PASS END=24120232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 24120233 . T . PASS END=24120234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 24120235 . C . PASS END=24120235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 24120236 . C . PASS END=24120242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 24120350 . G . PASS END=24120350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 24120351 . T . PASS END=24120377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,701:0,63,255:24,0 chr1 24120378 . G . PASS END=24120378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:21,0 chr1 24120379 . C . PASS END=24120416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,65,255:25,0 chr1 24120417 . A . PASS END=24120417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:19,0 chr1 24120418 . A . PASS END=24120425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 24120426 . A . PASS END=24120426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr1 24120427 . C . PASS END=24120445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:22,0 chr1 24120446 . T . PASS END=24120466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,651:0,41,255:19,0 chr1 24120467 . G . PASS END=24120469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 24120470 . A . PASS END=24120471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 24120472 . G . PASS END=24120479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 24120480 . C . PASS END=24120483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,806:0,53,255:19,0 chr1 24120484 . T . PASS END=24120491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,67,255:26,0 chr1 24120492 . C . PASS END=24120511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:30,0 chr1 24120512 . C . PASS END=24120512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 24120513 . T . PASS END=24120530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1239:0,89,255:33,0 chr1 24120531 . C . PASS END=24120531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:31,0 chr1 24120532 . C . PASS END=24120534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:34,0 chr1 24120535 . T . PASS END=24120535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1203:0,56,255:32,0 chr1 24120536 . C . PASS END=24120544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:36:0,80,1176:0,80,255:35,0 chr1 24120545 . T . PASS END=24120545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1202:0,53,255:33,0 chr1 24120546 . C . PASS END=24120564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1199:0,89,255:36,0 chr1 24120565 . T . PASS END=24120565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1064:0,69,255:30,0 chr1 24120566 . T . PASS END=24120567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 24120568 . A . PASS END=24120568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:31,0 chr1 24120569 . G . PASS END=24120570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1119:0,82,255:32,0 chr1 24120571 . A . PASS END=24120571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 24120572 . T . PASS END=24120572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 24120573 . G . PASS END=24120573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1086:0,47,255:31,0 chr1 24120574 . A . PASS END=24120575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1081:0,85,255:32,0 chr1 24120576 . A . PASS END=24120576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 24120577 . T . PASS END=24120580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1158:0,85,255:33,0 chr1 24120581 . G . PASS END=24120581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:28,0 chr1 24120582 . A . PASS END=24120584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1083:0,85,255:30,0 chr1 24120585 . G . PASS END=24120585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1068:0,52,255:26,0 chr1 24120586 . G . PASS END=24120586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 24120587 . G . PASS END=24120587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:27,0 chr1 24120588 . A . PASS END=24120588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:28,0 chr1 24120589 . T . PASS END=24120589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:27,0 chr1 24120590 . C . PASS END=24120590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 24120591 . C . PASS END=24120593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,964:0,63,255:30,0 chr1 24120594 . G . PASS END=24120594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:26:32:0,26,966:0,26,255:28,0 chr1 24120595 . C . PASS END=24120595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 24120596 . C . PASS END=24120596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:29,0 chr1 24120597 . A . PASS END=24120597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 24120598 . A . PASS END=24120598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,957:0,76,255:29,0 chr1 24120599 . T . PASS END=24120599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 24120600 . C . PASS END=24120600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr1 24120601 . G . PASS END=24120601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,890:0,27,255:25,0 chr1 24120602 . A . PASS END=24120602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 24120603 . A . PASS END=24120603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,959:0,43,255:26,0 chr1 24120604 . T . PASS END=24120604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,931:0,35,255:27,0 chr1 24120605 . C . PASS END=24120608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:30:0,62,922:0,62,255:29,0 chr1 24120609 . C . LowGQ END=24120609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,825:15,0,255:26,0 chr1 24120610 . T . PASS END=24120610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,897:0,37,255:28,0 chr1 24120611 . G . PASS END=24120611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 24120612 . G . PASS END=24120612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 24120613 . G . PASS END=24120613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr1 24120614 . A . PASS END=24120614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:5:31:0,5,914:0,5,255:26,0 chr1 24120615 . G . PASS END=24120615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 24120616 . G . PASS END=24120616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1007:0,60,255:27,0 chr1 24120617 . C . PASS END=24120617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,929:0,40,255:25,0 chr1 24120618 . T . PASS END=24120619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:31:0,60,1013:0,60,255:29,0 chr1 24120620 . T . PASS END=24120620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1101:0,80,255:29,0 chr1 24120621 . T . PASS END=24120621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:30:32:0,30,927:0,30,255:26,0 chr1 24120622 . C . PASS END=24120622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 24120623 . A . PASS END=24120623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,987:0,63,255:28,0 chr1 24120624 . C . PASS END=24120624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1101:0,80,255:28,0 chr1 24120625 . A . LowGQ END=24120625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:0:32:0,0,845:9,0,255:24,0 chr1 24120626 . G . PASS END=24120626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 24120714 . G . PASS END=24120724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,629:0,40,255:19,0 chr1 24120725 . G . PASS END=24120725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 24120726 . T . PASS END=24120727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 24120728 . C . PASS END=24120728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 24120729 . C . PASS END=24120729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 24120730 . T . PASS END=24120736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 24120737 . G . PASS END=24120737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 24120738 . G . PASS END=24120757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 24120758 . T . PASS END=24120758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,687:0,44,255:23,0 chr1 24120759 . C . PASS END=24120784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr1 24120785 . C . PASS END=24120785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:24,0 chr1 24120786 . T . PASS END=24120789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,978:0,78,255:26,0 chr1 24120790 . T . PASS END=24120793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr1 24120794 . T . PASS END=24120796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 24120797 . G . PASS END=24120798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24120799 . A . PASS END=24120799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 24120800 . C . PASS END=24120809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1109:0,87,255:31,0 chr1 24120810 . C . PASS END=24120810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:29,0 chr1 24120811 . C . PASS END=24120820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:30,0 chr1 24120821 . T . PASS END=24120821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:29,0 chr1 24120822 . G . PASS END=24120823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 24120824 . C . PASS END=24120825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:43:33:0,43,1005:0,43,255:30,0 chr1 24120826 . C . PASS END=24120827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1280:0,94,255:36,0 chr1 24120828 . A . PASS END=24120828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1067:0,74,255:34,0 chr1 24120829 . C . PASS END=24120829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1313:0,108,255:36,0 chr1 24120830 . T . PASS END=24120830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:35,0 chr1 24120831 . G . PASS END=24120833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1244:0,94,255:37,0 chr1 24120834 . C . PASS END=24120834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr1 24120835 . C . PASS END=24120835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1360:0,111,255:37,0 chr1 24120836 . C . PASS END=24120836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:35,0 chr1 24120837 . C . PASS END=24120839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:36,0 chr1 24120840 . G . PASS END=24120840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1172:0,64,255:34,0 chr1 24120841 . C . PASS END=24120843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,104,1411:0,104,255:38,0 chr1 24120844 . T . PASS END=24120844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:69:40:0,69,907:0,69,255:37,0 chr1 24120845 . T . PASS END=24120856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1289:0,81,255:40,0 chr1 24120857 . C . PASS END=24120857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1183:0,56,255:37,0 chr1 24120858 . C . PASS END=24120858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 24120859 . T . PASS END=24120859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1413:0,79,255:40,0 chr1 24120860 . C . PASS END=24120879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:80:40:0,80,1405:0,80,255:40,0 chr1 24120880 . A . PASS END=24120880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1318:0,70,255:32,0 chr1 24120881 . G . PASS END=24120887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:41:0,82,1336:0,82,255:40,0 chr1 24120917 . G . PASS END=24121162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:89:44:0,89,1590:0,89,255:40,0 chr1 24121172 . G . PASS END=24121222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:57:0,120,1800:0,139,255:40,0 chr1 24122110 . T . PASS END=24122110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr1 24122112 . T . PASS END=24122112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1107:0,99,255:33,0 chr1 24122247 . A . PASS END=24122247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 24122261 . C . PASS END=24122261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 24122281 . C . PASS END=24122281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 24122370 . C . PASS END=24122370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 24122427 . A . PASS END=24122427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 24122439 . T . PASS END=24122440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 24122441 . A . PASS END=24122441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 24122442 . G . PASS END=24122463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:31,0 chr1 24122464 . G . PASS END=24122465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 24122466 . A . PASS END=24122467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24122468 . T . PASS END=24122470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 24122471 . G . PASS END=24122493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 24122494 . T . PASS END=24122494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24122495 . C . PASS END=24122497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 24122510 . G . PASS END=24122510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 24122634 . C . PASS END=24122634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24122641 . A . PASS END=24122667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:34:0,82,1302:0,82,255:39,0 chr1 24122668 . T . PASS END=24122668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:38,0 chr1 24122669 . C . PASS END=24122669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1467:0,117,255:39,0 chr1 24122670 . C . PASS END=24122671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:38,0 chr1 24122672 . C . PASS END=24122678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:41:0,85,1504:0,85,255:40,0 chr1 24122679 . T . PASS END=24122679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:37,0 chr1 24122680 . C . PASS END=24122755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:40:0,91,1535:0,91,255:40,0 chr1 24122764 . C . PASS END=24122764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 24122985 . G . PASS END=24122985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1374:0,57,255:39,0 chr1 24122993 . G . PASS END=24122993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1317:0,44,255:39,0 chr1 24122999 . C . PASS END=24123023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:43:0,96,1448:0,96,255:40,0 chr1 24123024 . G . PASS END=24123054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:43:0,96,1490:0,96,255:40,0 chr1 24123055 . T . PASS END=24123055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:33,0 chr1 24123056 . G . PASS END=24123058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,99,1485:0,126,255:34,0 chr1 24123059 . C . PASS END=24123059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:34,0 chr1 24123060 . G . PASS END=24123069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:34,0 chr1 24123070 . T . PASS END=24123070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:30,0 chr1 24123071 . G . PASS END=24123077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1205:0,91,255:32,0 chr1 24123187 . C . PASS END=24123187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 24123188 . C . PASS END=24123188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 24123189 . G . PASS END=24123189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 24123190 . G . PASS END=24123192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 24123193 . G . PASS END=24123193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:19,0 chr1 24123194 . C . PASS END=24123197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 24123198 . A . PASS END=24123200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:21,0 chr1 24123201 . G . PASS END=24123203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 24123204 . C . PASS END=24123204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 24123205 . T . PASS END=24123205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 24123206 . T . PASS END=24123206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 24123207 . T . PASS END=24123209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 24123210 . G . PASS END=24123210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 24123211 . C . PASS END=24123227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 24123228 . T . PASS END=24123228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 24123229 . G . PASS END=24123243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,929:0,65,255:26,0 chr1 24123244 . A . PASS END=24123260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 24123261 . A . PASS END=24123272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 24123348 . C . PASS END=24123348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24123366 . C . PASS END=24123375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 24123376 . C . PASS END=24123379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 24123380 . G . PASS END=24123394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 24123395 . C . PASS END=24123432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,937:0,62,255:26,0 chr1 24123524 . C . PASS END=24123617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1134:0,83,255:37,0 chr1 24123618 . A . PASS END=24123618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:28,0 chr1 24123619 . G . PASS END=24123624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:29,0 chr1 24123625 . C . PASS END=24123637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,931:0,64,255:26,0 chr1 24123649 . G . PASS END=24123649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:20,0 chr1 24124185 . C . PASS END=24124190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 24124191 . T . PASS END=24124191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 24124192 . G . PASS END=24124212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,837:0,66,255:25,0 chr1 24124213 . A . PASS END=24124213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 24124214 . T . PASS END=24124214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 24124215 . T . PASS END=24124215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 24124216 . T . PASS END=24124223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 24124224 . G . PASS END=24124224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 24124225 . A . PASS END=24124235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 24124236 . C . PASS END=24124253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1064:0,84,255:30,0 chr1 24124254 . A . PASS END=24124254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 24124255 . C . PASS END=24124258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 24124259 . C . PASS END=24124259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr1 24124260 . A . PASS END=24124269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 24124270 . T . PASS END=24124272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 24124273 . G . PASS END=24124273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24124274 . C . PASS END=24124276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 24124277 . C . PASS END=24124299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1111:0,87,255:30,0 chr1 24124300 . T . PASS END=24124301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24124302 . C . PASS END=24124309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:28,0 chr1 24124310 . C . PASS END=24124314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 24124315 . G . PASS END=24124315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24124316 . C . PASS END=24124316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 24124317 . T . PASS END=24124318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24124319 . A . PASS END=24124350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 24124351 . G . PASS END=24124361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 24124595 . C . PASS END=24124595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 24124607 . C . PASS END=24124608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1274:0,102,255:34,0 chr1 24124609 . C . PASS END=24124609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 24124610 . C . PASS END=24124632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1241:0,89,255:35,0 chr1 24124633 . G . PASS END=24124633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr1 24124634 . G . PASS END=24124687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1283:0,95,255:38,0 chr1 24124688 . C . PASS END=24124688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:32,0 chr1 24124689 . C . PASS END=24124698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1227:0,88,255:33,0 chr1 24124699 . G . PASS END=24124699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:29,0 chr1 24124700 . G . PASS END=24124709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1148:0,83,255:33,0 chr1 24124710 . A . PASS END=24124713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,72,255:26,0 chr1 24124714 . A . PASS END=24124714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1127:0,50,255:23,0 chr1 24124715 . G . PASS END=24124720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,70,255:24,0 chr1 24124726 . G . PASS END=24124726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 24125105 . C . PASS END=24125121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:15:0,41,476:0,41,255:19,0 chr1 24125122 . G . PASS END=24125124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 24125125 . G . PASS END=24125126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 24125127 . G . PASS END=24125131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 24125132 . C . PASS END=24125132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 24125133 . T . PASS END=24125137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 24125138 . C . PASS END=24125139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 24125140 . A . PASS END=24125140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 24125141 . A . PASS END=24125141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 24125142 . A . PASS END=24125144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24125145 . T . PASS END=24125145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 24125146 . C . PASS END=24125152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 24125153 . C . PASS END=24125153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 24125154 . T . PASS END=24125156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 24125157 . A . PASS END=24125157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 24125158 . A . PASS END=24125161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,650:0,63,255:21,0 chr1 24125162 . C . PASS END=24125162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 24125163 . A . PASS END=24125164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 24125165 . A . PASS END=24125165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 24125166 . G . PASS END=24125184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,876:0,69,255:24,0 chr1 24125185 . G . PASS END=24125185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 24125186 . G . PASS END=24125189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 24125190 . C . PASS END=24125190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 24125191 . G . PASS END=24125193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 24125194 . G . PASS END=24125194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 24125195 . C . PASS END=24125199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24125200 . T . PASS END=24125201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,638:0,49,255:20,0 chr1 24125202 . T . PASS END=24125213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 24125214 . C . PASS END=24125214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 24125215 . C . PASS END=24125216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 24125217 . C . PASS END=24125220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 24125377 . C . PASS END=24125468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:38:0,81,1410:0,81,255:40,0 chr1 24125469 . C . PASS END=24125469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr1 24125470 . C . PASS END=24125474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1373:0,84,255:34,0 chr1 24125475 . G . PASS END=24125477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1335:0,72,255:32,0 chr1 24125478 . A . PASS END=24125486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1255:0,81,255:32,0 chr1 24125487 . T . PASS END=24125487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:32,0 chr1 24125488 . T . PASS END=24125488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 24125489 . C . PASS END=24125489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,0 chr1 24125490 . T . PASS END=24125492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:31,0 chr1 24125493 . G . PASS END=24125494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:27,0 chr1 24125495 . C . PASS END=24125495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 24125496 . A . PASS END=24125497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 24126862 . C . PASS END=24126862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 24126997 . G . PASS END=24126997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 24127034 . A . PASS END=24127034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 24128539 . C . PASS END=24128539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 24128565 . C . PASS END=24128565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 24128587 . C . PASS END=24128587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 24128615 . C . PASS END=24128615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 24128663 . A . PASS END=24128663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 24128849 . C . PASS END=24128849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 24128953 . T . PASS END=24129054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:35:0,84,1302:0,84,255:39,0 chr1 24130889 . C . PASS END=24130979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1202:0,87,255:35,0 chr1 24130980 . T . PASS END=24130980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,931:0,57,255:25,0 chr1 24130981 . C . PASS END=24130994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,67,255:26,0 chr1 24130995 . G . PASS END=24131002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 24131003 . C . PASS END=24131003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 24131004 . A . PASS END=24131006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,790:0,30,255:21,0 chr1 24131007 . C . PASS END=24131008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 24131009 . C . PASS END=24131011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 24131012 . C . PASS END=24131015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 24131018 . A . PASS END=24131018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 24131023 . C . PASS END=24131023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr1 24134611 . A . PASS END=24134611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 24134625 . C . PASS END=24134626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 24134627 . G . PASS END=24134627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 24134628 . C . PASS END=24134650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,878:0,61,255:26,0 chr1 24134651 . G . PASS END=24134653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 24134654 . C . PASS END=24134656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,80,255:26,0 chr1 24134657 . G . PASS END=24134683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr1 24134684 . C . PASS END=24134720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1164:0,90,255:31,0 chr1 24134721 . T C, 143.31 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,15,0:0,17,0:93:181,96,0,1236,96,1236:255,96,0:0,0:1.4331e+02,9.3310e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,16:0,0,19,13 chr1 24134722 . A . PASS END=24134750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 24134751 . C . PASS END=24134758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:23,0 chr1 24134759 . T . PASS END=24134761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 24134762 . T . PASS END=24134795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 24134796 . G . PASS END=24134812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 24134813 . C . PASS END=24134813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 24134815 . T . PASS END=24134816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 24137226 . C . PASS END=24137232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 24137233 . A . PASS END=24137233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 24137234 . C . PASS END=24137247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:24,0 chr1 24137248 . A . PASS END=24137248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 24137249 . T . PASS END=24137281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,892:0,62,255:26,0 chr1 24137282 . A . PASS END=24137282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 24137283 . G . PASS END=24137286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24137287 . T . PASS END=24137289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 24137299 . G . PASS END=24137299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 24140676 . T . PASS END=24140677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 24140680 . C . PASS END=24140682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1188:0,96,255:32,0 chr1 24140683 . C . PASS END=24140683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:31,0 chr1 24140684 . G . PASS END=24140811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1113:0,80,255:40,0 chr1 24140812 . T . PASS END=24140828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,77,255:26,0 chr1 24140831 . G . PASS END=24140831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 24143165 . C . PASS END=24143180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,111,1435:0,114,255:39,0 chr1 24143181 . T . PASS END=24143181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1282:0,62,255:36,0 chr1 24143182 . T . PASS END=24143188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1410:0,101,255:38,0 chr1 24143189 . T . PASS END=24143189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 24143190 . G . PASS END=24143259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1260:0,87,255:40,0 chr1 24143260 . T . PASS END=24143260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:28,0 chr1 24143966 . C . PASS END=24143969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,119,1645:0,119,255:40,0 chr1 24143970 . G . PASS END=24144073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:96:42:0,96,1440:0,98,255:40,0 chr1 24147000 . C . PASS END=24147041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1346:0,98,255:40,0 chr1 24147042 . T . PASS END=24147042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1353:0,51,255:36,0 chr1 24147043 . T . PASS END=24147065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:37:0,81,1215:0,81,255:39,0 chr1 24147066 . C . PASS END=24147081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,78,255:24,0 chr1 24147082 . A . PASS END=24147083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 24151845 . C . PASS END=24151863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 24151864 . G . PASS END=24151864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr1 24151865 . C . PASS END=24151905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 24151946 . C . PASS END=24151946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 24171661 . A . PASS END=24171661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 24171678 . T . PASS END=24171678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 24171762 . T . PASS END=24171762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 24171863 . G . PASS END=24171863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 24171919 . G . PASS END=24171919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 24171935 . A . PASS END=24171935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 24172108 . A . PASS END=24172108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 24172205 . T . PASS END=24172213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:31,0 chr1 24172214 . T . PASS END=24172214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 24172215 . C . PASS END=24172235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1082:0,80,255:31,0 chr1 24172236 . G . PASS END=24172236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr1 24172237 . C . PASS END=24172237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:28,0 chr1 24172238 . A . PASS END=24172241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,998:0,82,255:29,0 chr1 24172242 . T . PASS END=24172242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:27,0 chr1 24172243 . C . PASS END=24172278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1219:0,84,255:40,0 chr1 24172279 . A . PASS END=24172279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1344:0,79,255:40,0 chr1 24172280 . G . PASS END=24172344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:33:0,85,1166:0,85,255:40,0 chr1 24172345 . T . PASS END=24172345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 24172557 . T . PASS END=24172557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 24172564 . C . PASS END=24172663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:39:0,90,1200:0,95,255:40,1 chr1 24175139 . C . PASS END=24175323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:33:0,84,1238:0,95,255:40,0 chr1 24175324 . C . PASS END=24175329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:25,0 chr1 24180849 . C . PASS END=24180852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 24180853 . A . PASS END=24180854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 24180855 . T . PASS END=24180855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 24180856 . G . PASS END=24180869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,505:0,45,255:18,0 chr1 24180870 . C . PASS END=24180870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 24180871 . T . PASS END=24180871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 24180872 . G . PASS END=24180880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:27,0 chr1 24180881 . G . PASS END=24180883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24180884 . A . PASS END=24180884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 24180885 . A . PASS END=24180920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1154:0,83,255:36,0 chr1 24180921 . C . PASS END=24180957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1319:0,84,255:36,0 chr1 24180958 . G A,C, 49.83 PASS DP=36;MQ=250.00;FractionInformativeReads=0.972 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0,0:0.486,0.000,0.000:35:10,10,0,0:8,7,0,0:48:85,0,50,479,636,529,493,636,1115,1129:255,0,255:18,0:4.9833e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:8,10,6,11:6,12,5,12 chr1 24180959 . C . PASS END=24180981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:34,0 chr1 24180982 . A . PASS END=24180982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:28,0 chr1 24180983 . C . PASS END=24180995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:33:0,90,1266:0,94,255:33,0 chr1 24180996 . C . PASS END=24181005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1170:0,83,255:31,0 chr1 24181006 . A . PASS END=24181006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 24181007 . C . PASS END=24181007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 24181008 . A . PASS END=24181008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 24181009 . G . PASS END=24181009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 24181010 . G . PASS END=24181010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 24181011 . A . PASS END=24181011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 24181012 . A . PASS END=24181024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:24,0 chr1 24181025 . C . PASS END=24181030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 24181031 . T . PASS END=24181039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 24181040 . A . PASS END=24181050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 24186287 . C . PASS END=24186393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:36:0,94,1147:0,94,255:40,0 chr1 24189619 . C . PASS END=24189619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 24189624 . C . PASS END=24189732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:37:0,84,1260:0,94,255:40,0 chr1 24189733 . G . PASS END=24189737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:25,0 chr1 24189738 . T . PASS END=24189761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,531:0,48,255:18,0 chr1 24189764 . T . PASS END=24189764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 24191981 . C . PASS END=24191998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,721:0,60,255:25,0 chr1 24191999 . C . PASS END=24191999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 24192000 . C . PASS END=24192005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 24192006 . C . PASS END=24192006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:24,0 chr1 24192007 . A . PASS END=24192010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:26,0 chr1 24192011 . A . PASS END=24192012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr1 24192013 . C . PASS END=24192013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 24192014 . A . PASS END=24192015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 24192016 . A . PASS END=24192017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:27,0 chr1 24192018 . C . PASS END=24192036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 24192037 . T . PASS END=24192037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 24192038 . T . PASS END=24192038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24192039 . T . PASS END=24192039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 24192040 . G . PASS END=24192049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 24192050 . T . PASS END=24192073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:26:0,70,903:0,70,255:26,0 chr1 24192074 . T . PASS END=24192074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,683:0,28,255:21,0 chr1 24192075 . T . PASS END=24192075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 24192076 . T . PASS END=24192076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 24192077 . G . PASS END=24192090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,878:0,72,255:24,0 chr1 24192091 . A . PASS END=24192091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 24192092 . T . PASS END=24192094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 24192095 . T . PASS END=24192095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr1 24192096 . T . PASS END=24192104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 24192105 . A . PASS END=24192115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 24193147 . C . PASS END=24193166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1058:0,87,255:30,0 chr1 24193167 . G . PASS END=24193167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 24193168 . G . PASS END=24193178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1042:0,90,255:31,0 chr1 24193179 . A . PASS END=24193180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1047:0,74,255:30,0 chr1 24193181 . C . PASS END=24193185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1119:0,93,255:32,0 chr1 24193186 . T . PASS END=24193186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr1 24193187 . G . PASS END=24193212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:29:0,84,1150:0,86,255:33,0 chr1 24193213 . G . PASS END=24193213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 24193214 . G . PASS END=24193221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 24193222 . C . PASS END=24193228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 24193229 . T . PASS END=24193229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr1 24193230 . C . PASS END=24193232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 24194214 . C . PASS END=24194227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:35:0,88,1190:0,88,255:35,0 chr1 24194373 . C . PASS END=24194373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 24194388 . T . PASS END=24194389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 24194390 . G . PASS END=24194395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 24194396 . C . PASS END=24194396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr1 24194397 . G . PASS END=24194410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:22,0 chr1 24194411 . G . PASS END=24194411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 24194412 . T . PASS END=24194413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 24194414 . G . PASS END=24194414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 24194415 . G . PASS END=24194425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 24194426 . C . PASS END=24194431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 24194432 . G . PASS END=24194441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 24194442 . G . PASS END=24194442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 24194443 . C . PASS END=24194443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 24194444 . A . PASS END=24194444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 24194445 . G . PASS END=24194447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 24194448 . A . PASS END=24194448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 24194449 . A . PASS END=24194450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 24194451 . T . PASS END=24194451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 24194452 . G . PASS END=24194467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,856:0,61,255:24,0 chr1 24194468 . G . PASS END=24194468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr1 24194469 . T . PASS END=24194485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,886:0,75,255:25,0 chr1 24194486 . G . PASS END=24194487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 24194488 . A . PASS END=24194502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 24194503 . A . PASS END=24194503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 24194504 . G . PASS END=24194504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24194505 . C . PASS END=24194516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:19,0 chr1 24194517 . G . PASS END=24194532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 24194533 . G . PASS END=24194533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 24194534 . C . PASS END=24194534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 24194535 . C . PASS END=24194537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 24194538 . T . PASS END=24194538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 24194539 . G . PASS END=24194540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 24194541 . C . PASS END=24194542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 24194543 . C . PASS END=24194573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:32:12:0,32,413:0,32,255:13,0 chr1 24194574 . G . PASS END=24194574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 24194575 . A . PASS END=24194576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 24194577 . A . PASS END=24194577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 24194578 . A . PASS END=24194582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 24194583 . C . PASS END=24194583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 24194584 . C . PASS END=24194590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 24194591 . G . PASS END=24194604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,499:0,45,255:15,0 chr1 24194605 . A . PASS END=24194605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:14,0 chr1 24194606 . C . PASS END=24194607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 24194608 . T . PASS END=24194608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 24194609 . G . PASS END=24194611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 24194612 . T . PASS END=24194612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr1 24194613 . T . PASS END=24194615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 24194616 . T . PASS END=24194616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 24194617 . C . PASS END=24194632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 24194633 . C . PASS END=24194633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,413:0,3,255:13,0 chr1 24194634 . G . PASS END=24194637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 24194638 . G . PASS END=24194638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 24194639 . A . PASS END=24194642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 24194643 . T . PASS END=24194656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 24194657 . G . PASS END=24194659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 24194660 . T . PASS END=24194666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 24194667 . T . PASS END=24194667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:12,0 chr1 24194668 . A . PASS END=24194671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 24194672 . G . PASS END=24194673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,441:0,23,255:12,0 chr1 24194674 . G . PASS END=24194678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 24194679 . G . PASS END=24194679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 24194680 . G . PASS END=24194682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 24194683 . G . PASS END=24194683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 24194684 . G . PASS END=24194691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 24194692 . G . PASS END=24194692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 24194693 . C . PASS END=24194754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,637:0,44,255:19,0 chr1 24194755 . A . PASS END=24194758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:22,0 chr1 24194759 . C . PASS END=24194759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 24194760 . A . PASS END=24194764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 24194765 . C . PASS END=24194766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 24194767 . G . PASS END=24194775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 24194776 . T . PASS END=24194776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 24194820 . C . PASS END=24194820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 24201025 . T . PASS END=24201031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 24201032 . T . PASS END=24201034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 24201035 . G . PASS END=24201035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr1 24201036 . A . PASS END=24201039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:26,0 chr1 24201040 . G . PASS END=24201044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 24201045 . G . PASS END=24201045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 24201046 . A . PASS END=24201056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,989:0,90,255:30,0 chr1 24201057 . C . PASS END=24201079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1156:0,83,255:34,0 chr1 24201080 . T . PASS END=24201080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr1 24201081 . C . PASS END=24201093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:33,0 chr1 24201094 . G C, 148.87 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,13,0:0,21,0:99:187,102,0,1288,102,1288:255,102,0:0,0:1.4887e+02,9.8869e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,14:0,0,21,13 chr1 24201095 . G . PASS END=24201108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1178:0,83,255:33,0 chr1 24201109 . C T, 149.32 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,14,0:0,20,0:99:187,102,0,1302,102,1302:255,102,0:0,0:1.4932e+02,9.9324e+01,0.0000e+00,4.5000e+02,1.3409e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,17:0,0,17,17 chr1 24201110 . G . PASS END=24201146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1395:0,102,255:38,0 chr1 24201147 . C . PASS END=24201224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1280:0,92,255:37,0 chr1 24201225 . T . PASS END=24201235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 24201236 . T . PASS END=24201236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,989:0,57,255:29,0 chr1 24201237 . T . PASS END=24201245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 24201246 . A . PASS END=24201260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 24201261 . A . PASS END=24201261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24201262 . A G, 133.82 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:84:172,87,0,1080,87,1080:255,87,0:0,0:1.3382e+02,8.3818e+01,0.0000e+00,4.5000e+02,1.1859e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,14:0,0,19,10 chr1 24201263 . G . PASS END=24201265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 24201266 . A . PASS END=24201271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 24201272 . T . PASS END=24201272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24201273 . T . PASS END=24201273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:26,0 chr1 24201274 . C . PASS END=24201289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr1 24201290 . A . PASS END=24201290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 24201291 . G . PASS END=24201293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 24201294 . T . PASS END=24201299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 24201300 . C . PASS END=24201319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 24201320 . G . PASS END=24201356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,856:0,72,255:25,0 chr1 24201357 . A G, 124.33 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,16,0:0,10,0:74:162,77,0,949,77,949:255,81,0:0,0:1.2433e+02,7.4331e+01,2.5886e-07,4.5000e+02,1.0910e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,16:0,0,12,14 chr1 24201358 . C . PASS END=24201367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:24,0 chr1 24201368 . A . PASS END=24201369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr1 24201370 . G . PASS END=24201394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr1 24201395 . C . PASS END=24201410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 24201411 . C . PASS END=24201427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,930:0,62,255:24,0 chr1 24201428 . T . PASS END=24201428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 24201429 . G . PASS END=24201442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 24201443 . C . PASS END=24201444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 24201445 . G . PASS END=24201447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 24201448 . C T, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,17,0:0,11,0:81:169,84,0,1078,84,1078:255,84,0:0,0:1.3127e+02,8.1269e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,18:0,0,15,13 chr1 24201449 . A . PASS END=24201454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:22,0 chr1 24201455 . T . PASS END=24201455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 24201456 . G . PASS END=24201483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:26,0 chr1 24201484 . G . PASS END=24201485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1255:0,86,255:30,0 chr1 24201486 . T . PASS END=24201490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 24201491 . A . PASS END=24201491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:28,0 chr1 24201492 . T . PASS END=24201605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1155:0,80,255:40,0 chr1 24201606 . G . PASS END=24201642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,108,1620:0,120,255:40,0 chr1 24201643 . G A, 182.44 PASS DP=46;MQ=250.00;FractionInformativeReads=0.978 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,21,0:0,24,0:132:220,135,0,1745,135,1745:255,135,0:0,0:1.8244e+02,1.3244e+02,0.0000e+00,4.5000e+02,1.6721e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,21:0,0,16,29 chr1 24201644 . C . PASS END=24201680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,120,1800:0,129,255:40,0 chr1 24201681 . C . PASS END=24201705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:89:44:0,89,1573:0,89,255:40,0 chr1 24201706 . G . PASS END=24201706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1656:0,70,255:40,0 chr1 24201707 . C . PASS END=24201876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:95:42:0,95,1576:0,95,255:40,0 chr1 24201877 . A . PASS END=24201918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:38:0,97,1351:0,97,255:40,0 chr1 24201919 . T C, 159.61 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,39,0:1.000,0.000:39:0,15,0:0,24,0:110:197,113,0,297,297,297:255,117,0:0,0:1.5961e+02,1.0961e+02,0.0000e+00,2.9438e+02,3.2915e+02,2.9739e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,28:0,0,23,16:24201919 chr1 24201920 . T C, 158.36 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,38,0:1.000,0.000:38:0,15,0:0,23,0:108:196,111,0,296,296,296:255,114,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,2.9313e+02,3.2790e+02,2.9614e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,27:0,0,22,16:24201919 chr1 24201921 . G . PASS END=24201962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1163:0,80,255:36,0 chr1 24201963 . G . PASS END=24201972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 24201973 . C . PASS END=24201975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:24,0 chr1 24201976 . G . PASS END=24201983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr1 24201984 . G . PASS END=24201985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:28:0,78,1170:0,84,255:26,0 chr1 24201986 . G . PASS END=24201994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 24201995 . A . PASS END=24201995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 24201996 . C . PASS END=24202019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:30,0 chr1 24202020 . C . PASS END=24202020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 24202021 . A . PASS END=24202048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,92,255:37,0 chr1 24202049 . T . PASS END=24202049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1042:0,65,255:28,0 chr1 24202050 . T . PASS END=24202057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:29,0 chr1 24202058 . A . PASS END=24202058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 24202059 . A . PASS END=24202061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24202062 . C . PASS END=24202063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:27,0 chr1 24202064 . T . PASS END=24202064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24202065 . C . PASS END=24202065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 24202066 . C . PASS END=24202066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24202067 . T . PASS END=24202067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 24202068 . T . PASS END=24202081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24202082 . A . PASS END=24202086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 24202087 . T . PASS END=24202087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 24202088 . G . PASS END=24202100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:23,0 chr1 24202101 . C . PASS END=24202107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 24287458 . A . LowDepth;LowGQ END=24287491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,16:1,0 chr1 24287492 . A . LowGQ END=24287624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:1:0,0,16:0,0,16:3,0 chr1 24287930 . G . PASS END=24287933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:5,0 chr1 24287948 . A . PASS END=24287960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 24287961 . A . PASS END=24287969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,227:6,0 chr1 24287970 . A . LowGQ END=24287970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,204:3,0 chr1 24287971 . C . PASS END=24287992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 24287993 . A . LowGQ END=24287993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 24287994 . A . PASS END=24288026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 24288027 . A . LowGQ END=24288027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 24288028 . G . PASS END=24288034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 24288035 . A . LowGQ END=24288035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 24288036 . A . PASS END=24288051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,156:0,15,156:6,0 chr1 24288052 . G . PASS END=24288062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 24288063 . T . PASS END=24288072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 24288073 . A . PASS END=24288076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 24288077 . G . PASS END=24288077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 24288078 . A . PASS END=24288079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 24288080 . A . PASS END=24288096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:7:0,11,225:0,11,205:6,0 chr1 24288097 . C . PASS END=24288110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 24288111 . C . LowGQ END=24288111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:6,0 chr1 24288112 . C . PASS END=24288114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 24288115 . G . LowGQ END=24288115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:6,0 chr1 24288116 . C . PASS END=24288120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 24288121 . C . PASS END=24288121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 24288122 . A . PASS END=24288178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 24288179 . T . PASS END=24288179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 24288180 . T . PASS END=24288181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 24288182 . T . PASS END=24288193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 24288194 . T . LowGQ END=24288194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:4,0 chr1 24288195 . T . PASS END=24288197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 24288198 . T . PASS END=24288198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 24288199 . T . PASS END=24288205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:5,0 chr1 24288206 . T . LowGQ END=24288206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 24288207 . C . PASS END=24288214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,141:5,0 chr1 24288215 . A . PASS END=24288224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 24288225 . A . PASS END=24288225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 24288226 . T . PASS END=24288227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 24288228 . C . PASS END=24288252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 24288253 . A . PASS END=24288261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,247:0,21,247:7,0 chr1 24288262 . T . PASS END=24288264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 24288265 . T . PASS END=24288287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 24288288 . G . PASS END=24288367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 24294153 . T . PASS END=24294185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 24294186 . G . PASS END=24294189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 24294190 . T . PASS END=24294190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 24294191 . G . PASS END=24294196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 24294197 . T . PASS END=24294197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 24294198 . C . PASS END=24294211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 24294212 . G . PASS END=24294213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 24294416 . T . PASS END=24294438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:81:72:0,81,1215:0,113,255:40,0 chr1 24294439 . T . PASS END=24294446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:72:71:0,72,1080:0,147,255:26,0 chr1 24297632 . T . LowDepth;LowGQ END=24297645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 24297646 . A . LowGQ END=24297929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 24298063 . C . PASS END=24298070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 24298071 . G . PASS END=24298071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 24298072 . T . PASS END=24298078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 24298079 . G . PASS END=24298083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 24298084 . C . PASS END=24298116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:13,0 chr1 24298340 . T . PASS END=24298343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr1 24298344 . T . PASS END=24298372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,164:0,15,164:6,0 chr1 24298373 . T . LowGQ END=24298373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 24298374 . C . PASS END=24298380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:5,0 chr1 24298381 . C T, 0.34 DRAGENSnpHardQUAL DP=5;MQ=14.00;MQRankSum=0.731;ReadPosRankSum=-0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:2,1,0:2,0,0:11:24,0,14,36,135,171:24,0,132:4,0:3.3645e-01,1.1363e+01,2.8363e+01,4.7142e+01,1.8114e+02,1.8515e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,1,0:1,3,1,0 chr1 24298382 . C . PASS END=24298388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:5,0 chr1 24298389 . T . LowGQ END=24298395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:5:0,0,135:0,0,140:3,0 chr1 24298396 . C . PASS END=24298396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,156:4,0 chr1 24298397 . C . PASS END=24298399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,164:3,0 chr1 24298400 . C . PASS END=24298418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 24298419 . T . PASS END=24298423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 24298424 . C . LowGQ END=24298502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 24301464 . T . PASS END=24301473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 24301474 . C . PASS END=24301567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,94:0,12,94:4,0 chr1 24305163 . T . LowDepth;LowGQ END=24305307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 24306681 . C . LowDepth;LowGQ END=24306741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:1,0 chr1 24306742 . A . LowDepth;LowGQ END=24306745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 24383854 . T . PASS END=24383876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:19,0 chr1 24383877 . G . PASS END=24383893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 24383894 . A . PASS END=24383897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 24383898 . C . PASS END=24383902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 24383903 . A . PASS END=24383903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24383904 . T . PASS END=24383904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 24383905 . G . PASS END=24383911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr1 24383912 . T . PASS END=24383919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:20,0 chr1 24383920 . C . PASS END=24383922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24383923 . G . PASS END=24383924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 24383925 . A . PASS END=24383945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,861:0,63,255:23,0 chr1 24383946 . A . PASS END=24383946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 24383947 . G . PASS END=24383960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,984:0,68,255:26,0 chr1 24383961 . C . PASS END=24383962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24383963 . C . PASS END=24383963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 24383964 . T . PASS END=24383964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr1 24383965 . G . PASS END=24383968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,834:0,64,255:27,0 chr1 24383969 . T . PASS END=24383972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr1 24383973 . T . PASS END=24383974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 24383975 . T . PASS END=24383975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 24383976 . T . PASS END=24383976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 24383977 . G . PASS END=24383978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 24383979 . C . PASS END=24383999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:27,0 chr1 24384000 . C . PASS END=24384000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:27,0 chr1 24384001 . C . PASS END=24384001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:27,0 chr1 24384002 . T . PASS END=24384025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1209:0,86,255:32,0 chr1 24384026 . T . PASS END=24384026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 24384027 . A . PASS END=24384088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1136:0,83,255:34,0 chr1 24384089 . C . PASS END=24384089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 24384090 . C . PASS END=24384106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 24384107 . A . PASS END=24384117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 24385414 . C . PASS END=24385426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1422:0,87,255:40,0 chr1 24385427 . A . PASS END=24385427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1308:0,60,255:36,0 chr1 24385428 . T . PASS END=24385469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1310:0,95,255:40,0 chr1 24387550 . T . PASS END=24387572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,161,255:40,0 chr1 24387763 . T . PASS END=24387784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,167,255:40,0 chr1 24387785 . T . PASS END=24387799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,148,255:40,0 chr1 24388436 . C . PASS END=24388446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1188:0,85,255:35,0 chr1 24388447 . A . PASS END=24388447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1132:0,72,255:32,0 chr1 24388448 . G . PASS END=24388560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:36:0,90,1324:0,92,255:40,0 chr1 24388561 . C . PASS END=24388565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 24388566 . C . PASS END=24388568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:27,0 chr1 24388569 . T . PASS END=24388582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 24388583 . T . PASS END=24388583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:20,0 chr1 24388584 . C . PASS END=24388585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 24388586 . C . PASS END=24388589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 24388590 . A . PASS END=24388592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24388593 . T . PASS END=24388599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:18,0 chr1 24389616 . T . PASS END=24389634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1039:0,84,255:30,0 chr1 24389635 . T . PASS END=24389635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 24389636 . C . PASS END=24389651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 24389652 . T . PASS END=24389652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 24389653 . A . PASS END=24389670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1042:0,82,255:33,0 chr1 24389671 . A . PASS END=24389673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 24389674 . T . PASS END=24389678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 24389679 . A . PASS END=24389716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 24389717 . A . PASS END=24389724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,682:0,46,255:19,0 chr1 24389982 . C . PASS END=24390020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,149,255:40,0 chr1 24390562 . C . PASS END=24390649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1272:0,94,255:40,0 chr1 24392381 . C . PASS END=24392388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1217:0,86,255:36,0 chr1 24392389 . T . PASS END=24392389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:35,0 chr1 24392390 . G . PASS END=24392491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:35:0,93,1139:0,94,255:40,0 chr1 24392597 . C . PASS END=24392698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,157,255:40,0 chr1 24393511 . C . PASS END=24393520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:33,0 chr1 24393521 . A . PASS END=24393522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:32,0 chr1 24393523 . C . PASS END=24393578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1152:0,83,255:35,0 chr1 24394460 . C . PASS END=24394519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,121,255:40,0 chr1 24394713 . C . PASS END=24394713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 24394714 . G . PASS END=24394715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:4:27:0,4,868:0,4,255:26,0 chr1 24394716 . C . PASS END=24394716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,917:0,10,255:26,0 chr1 24394717 . A . LowGQ END=24394717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:0:31:0,0,992:1,0,255:27,0 chr1 24394718 . T . PASS END=24394720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,994:0,16,255:28,0 chr1 24394721 . A . LowGQ END=24394721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:0:31:0,0,939:1,0,255:27,0 chr1 24394722 . C . PASS END=24394722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1024:0,16,255:28,0 chr1 24394723 . C . PASS END=24394723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 24394724 . A . PASS END=24394724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 24394725 . G . PASS END=24394725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24394726 . T . PASS END=24394726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,955:0,13,255:27,0 chr1 24394727 . G . PASS END=24394727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 24394728 . T . PASS END=24394728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1006:0,35,255:27,0 chr1 24394729 . C . PASS END=24394729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 24394730 . A . PASS END=24394734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 24394735 . A . PASS END=24394735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 24394736 . A . PASS END=24394736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 24394737 . T . PASS END=24394737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 24394738 . C . PASS END=24394738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr1 24394739 . T . PASS END=24394739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 24394740 . G . PASS END=24394741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 24394742 . T . PASS END=24394742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,912:0,73,255:29,0 chr1 24394743 . T . PASS END=24394754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 24394755 . C . PASS END=24394755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:28,0 chr1 24394756 . A . PASS END=24394757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1070:0,90,255:30,0 chr1 24394758 . C . PASS END=24394758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 24394759 . T . PASS END=24394760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 24394761 . G . PASS END=24394761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 24394762 . G . PASS END=24394762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 24394763 . A . PASS END=24394763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 24394764 . G . PASS END=24394816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1074:0,89,255:36,0 chr1 24394817 . T . PASS END=24394834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:65:24:0,65,990:0,65,255:26,0 chr1 24394835 . C . PASS END=24394835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 24394836 . G . PASS END=24394839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 24394840 . A . PASS END=24394840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 24394841 . A . PASS END=24394848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 24394849 . T . PASS END=24394849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,522:0,48,255:21,0 chr1 24394850 . T . PASS END=24394850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 24394851 . T . PASS END=24394851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,704:0,11,255:20,0 chr1 24394852 . G . PASS END=24394852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 24394853 . C . PASS END=24394853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 24394854 . G . PASS END=24394857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 24397607 . C . PASS END=24397620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:24,0 chr1 24397621 . T . PASS END=24397621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 24397622 . C . PASS END=24397628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,872:0,72,255:25,0 chr1 24397629 . T . PASS END=24397631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1009:0,81,255:29,0 chr1 24397632 . T . PASS END=24397632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:28,0 chr1 24397633 . T . PASS END=24397633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 24397634 . G . PASS END=24397634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 24397635 . A . PASS END=24397637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 24397638 . A . PASS END=24397638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,954:0,57,255:28,0 chr1 24397639 . T . PASS END=24397651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1078:0,90,255:31,0 chr1 24397652 . A . PASS END=24397652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 24397653 . G . PASS END=24397660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 24397661 . A . PASS END=24397664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,92,255:26,0 chr1 24397665 . A . PASS END=24397665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24397666 . A . PASS END=24397666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 24397667 . C . PASS END=24397675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1093:0,90,255:30,0 chr1 24397676 . T . PASS END=24397676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 24397677 . T . PASS END=24397686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1139:0,90,255:30,0 chr1 24397687 . G . PASS END=24397688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24397689 . C . PASS END=24397689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr1 24397690 . G . PASS END=24397724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,64,255:26,0 chr1 24397725 . C . PASS END=24397725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 24397726 . C . PASS END=24397732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,923:0,69,255:25,0 chr1 24397733 . C . PASS END=24397733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr1 24397734 . A . PASS END=24397743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,863:0,61,255:26,0 chr1 24398459 . C . PASS END=24398503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:87:41:0,87,1407:0,87,255:40,0 chr1 24400650 . C . PASS END=24400670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,114,1472:0,117,255:40,0 chr1 24400671 . T . PASS END=24400748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,105,1539:0,115,255:40,0 chr1 24400749 . T . PASS END=24400757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:37:0,72,1080:0,111,255:26,0 chr1 24400758 . A . PASS END=24400759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:28,0 chr1 24401809 . T . PASS END=24401828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 24401829 . C . PASS END=24401853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,454:0,42,255:19,0 chr1 24401854 . C . PASS END=24401874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,776:0,63,255:25,0 chr1 24401875 . T . PASS END=24401875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 24401876 . G . PASS END=24401888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,939:0,65,255:26,0 chr1 24401889 . G . PASS END=24401901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 24401902 . G . PASS END=24401924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 24401925 . A . PASS END=24401925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:21,0 chr1 24401926 . A . PASS END=24401931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 24401932 . T . PASS END=24401932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 24401933 . C . PASS END=24401941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 24401942 . C . PASS END=24401965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 24402649 . C . PASS END=24402654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 24402655 . T . PASS END=24402655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr1 24402656 . G . PASS END=24402667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 24402668 . C . PASS END=24402668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 24402669 . A . PASS END=24402670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,961:0,65,255:26,0 chr1 24402671 . G . PASS END=24402673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 24402674 . A . PASS END=24402676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 24402677 . A . PASS END=24402732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1219:0,86,255:34,0 chr1 24402733 . C . PASS END=24402733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 24402734 . G . PASS END=24402760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1141:0,90,255:31,0 chr1 24402761 . A . PASS END=24402761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 24402762 . A . PASS END=24402763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 24406506 . C . PASS END=24406511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 24406512 . G . PASS END=24406520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:31,0 chr1 24406521 . A . PASS END=24406521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 24406522 . G . PASS END=24406602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1065:0,83,255:39,0 chr1 24406603 . G . PASS END=24406632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,902:0,62,255:26,0 chr1 24406633 . A . PASS END=24406633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 24406634 . G . PASS END=24406646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,815:0,69,255:23,0 chr1 24406647 . G . PASS END=24406647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 24406648 . G . PASS END=24406650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 24406651 . C . PASS END=24406664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:18,0 chr1 24406665 . C . PASS END=24406671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:12,0 chr1 24406672 . T . PASS END=24406679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:12:0,24,360:0,36,255:9,0 chr1 24406680 . G . PASS END=24406684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:8:0,18,270:0,24,255:6,0 chr1 24407820 . C . PASS END=24407822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:33,0 chr1 24407823 . G . PASS END=24407823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 24407824 . C . PASS END=24407931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:33:0,90,1350:0,93,255:40,0 chr1 24407932 . A . PASS END=24407932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:29,0 chr1 24407933 . T . PASS END=24407942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1125:0,80,255:30,0 chr1 24407943 . T . PASS END=24407946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 24408491 . C . PASS END=24408495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr1 24408496 . A . PASS END=24408500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 24408501 . C . PASS END=24408501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 24408502 . G . PASS END=24408531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,739:0,63,255:26,0 chr1 24408532 . G . PASS END=24408532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 24408533 . C . PASS END=24408535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 24408536 . G . PASS END=24408538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24408539 . C . PASS END=24408539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 24408540 . A . PASS END=24408546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 24408547 . C . PASS END=24408547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 24408548 . C . PASS END=24408553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 24408554 . A . PASS END=24408554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr1 24408555 . T . PASS END=24408556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 24408557 . C . PASS END=24408579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,893:0,64,255:26,0 chr1 24408580 . T . PASS END=24408580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,781:0,36,255:24,0 chr1 24408581 . C . PASS END=24408597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr1 24408598 . G . PASS END=24408598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:19,0 chr1 24408599 . C . PASS END=24408600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 24408601 . T . PASS END=24408601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:18,0 chr1 24408602 . G . PASS END=24408602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 24408603 . G . PASS END=24408604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24408605 . G . PASS END=24408606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 24408607 . G . PASS END=24408616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 24408617 . A . PASS END=24408617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 24408618 . A . PASS END=24408620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 24408621 . A . PASS END=24408654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,675:0,44,255:19,0 chr1 24408655 . A . PASS END=24408655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr1 24408656 . G . PASS END=24408659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 24408660 . T . PASS END=24408664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:13,0 chr1 24408665 . G . PASS END=24408665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 24408666 . G . PASS END=24408677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr1 24408678 . G . PASS END=24408678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 24409083 . C . PASS END=24409100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,748:0,63,255:24,0 chr1 24409101 . T . PASS END=24409101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 24409102 . G . PASS END=24409117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,870:0,61,255:26,0 chr1 24409118 . G . PASS END=24409168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,981:0,84,255:30,0 chr1 24409169 . T . PASS END=24409169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 24409170 . A . PASS END=24409171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 24409172 . T . PASS END=24409172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 24409173 . C . PASS END=24409176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 24409177 . C . PASS END=24409187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1024:0,71,255:26,0 chr1 24409188 . G . PASS END=24409194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 24409195 . A . PASS END=24409204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,850:0,67,255:25,0 chr1 24410958 . C . PASS END=24410961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 24410962 . T . PASS END=24410962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 24410963 . G . PASS END=24410963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 24410964 . C . PASS END=24410964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 24410965 . C . PASS END=24410972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:23,0 chr1 24410973 . G . PASS END=24410988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1016:0,80,255:31,0 chr1 24410989 . T . PASS END=24410989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr1 24410990 . T . PASS END=24411012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1249:0,96,255:38,0 chr1 24411013 . T . PASS END=24411013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:38,0 chr1 24411014 . C . PASS END=24411129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:39:0,93,1388:0,93,255:40,0 chr1 24413134 . C . PASS END=24413140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 24413141 . G . PASS END=24413142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 24413143 . C . PASS END=24413143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 24413144 . C . PASS END=24413158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:31,0 chr1 24413159 . T C, 44.65 PASS DP=31;MQ=248.42;MQRankSum=4.521;ReadPosRankSum=3.943;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,11,0:0.355,0.000:31:15,6,0:5,5,0:44:79,0,50,393,658,1051:255,0,255:20,0:4.4645e+01,1.7085e-04,5.3000e+01,3.9343e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,5,6,5:12,8,7,4 chr1 24413160 . T . PASS END=24413196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1125:0,80,255:40,0 chr1 24413197 . T . PASS END=24413306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:40:0,81,1215:0,83,255:40,0 chr1 24413307 . C . PASS END=24413317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:27:0,78,1170:0,81,255:26,0 chr1 24416028 . C . PASS END=24416029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 24416030 . T . PASS END=24416030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 24416031 . C . PASS END=24416042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,886:0,72,255:26,0 chr1 24416043 . C . PASS END=24416045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 24416046 . C . PASS END=24416046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 24416047 . A . PASS END=24416058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 24416059 . T C, 136.83 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,14,0:0,16,0:87:175,90,0,1134,90,1134:255,90,0:0,0:1.3683e+02,8.6825e+01,0.0000e+00,4.5000e+02,1.2160e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,10:0,0,14,16 chr1 24416060 . C . PASS END=24416069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 24416070 . G C, 49.71 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=2.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:8,6,0:8,8,0:48:84,0,50,501,564,1065:255,0,255:16,0:4.9711e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,8,6:5,11,10,4 chr1 24416071 . G . PASS END=24416109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1172:0,93,255:40,0 chr1 24416110 . T . PASS END=24416155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1212:0,81,255:40,0 chr1 24416555 . C . PASS END=24416555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 24416556 . T . PASS END=24416563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1123:0,80,255:31,0 chr1 24416564 . C . PASS END=24416564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1121:0,71,255:33,0 chr1 24416565 . G . PASS END=24416565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1296:0,102,255:34,0 chr1 24416566 . T . PASS END=24416566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr1 24416567 . C . PASS END=24416574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1176:0,86,255:35,0 chr1 24416575 . A . PASS END=24416575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1103:0,44,255:32,0 chr1 24416576 . T . PASS END=24416577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1264:0,92,255:35,0 chr1 24416578 . G . PASS END=24416580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1122:0,88,255:34,0 chr1 24416581 . A . PASS END=24416583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:41:35:0,41,1057:0,41,255:32,0 chr1 24416584 . T . PASS END=24416585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 24416586 . G . PASS END=24416586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1149:0,58,255:31,0 chr1 24416587 . T . PASS END=24416599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1081:0,85,255:33,0 chr1 24416600 . A . PASS END=24416600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,1004:0,54,255:30,0 chr1 24416601 . G . PASS END=24416603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1225:0,86,255:32,0 chr1 24416604 . G . PASS END=24416604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,948:0,49,255:29,0 chr1 24416605 . A . PASS END=24416605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 24416606 . T . PASS END=24416606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,975:0,46,255:30,0 chr1 24416607 . C . PASS END=24416608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1075:0,85,255:31,0 chr1 24417287 . C . PASS END=24417455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:80:29:0,80,1141:0,80,255:40,0 chr1 24417456 . G . PASS END=24417461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24417462 . C . PASS END=24417477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,67,255:26,0 chr1 24417478 . C . PASS END=24417478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:19,0 chr1 24417479 . C . PASS END=24417484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:20,0 chr1 24417485 . A . PASS END=24417486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:27:0,45,675:0,81,255:17,0 chr1 24418664 . C . PASS END=24418669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 24418670 . A . PASS END=24418675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,559:0,45,255:19,0 chr1 24418676 . T . PASS END=24418707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr1 24418708 . G . PASS END=24418709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 24418710 . G . PASS END=24418710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 24418711 . C . PASS END=24418730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:30,0 chr1 24418731 . G . PASS END=24418735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 24418736 . T . PASS END=24418736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr1 24418737 . C . PASS END=24418765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1157:0,93,255:33,0 chr1 24418766 . A . PASS END=24418767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24418768 . T C, 48.94 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=2.762;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,13,0:0.433,0.000:30:6,9,0:11,4,0:48:84,0,50,457,579,1036:255,0,255:15,0:4.8941e+01,7.7141e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,4,9:9,8,4,9 chr1 24418769 . G . PASS END=24418772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 24418773 . A . PASS END=24418786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 24418787 . G . PASS END=24418790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 24418791 . T . PASS END=24418791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,717:0,44,255:22,0 chr1 24418792 . C . PASS END=24418805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,976:0,65,255:26,0 chr1 24419437 . C . PASS END=24419458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 24419459 . C . PASS END=24419468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 24419469 . G . PASS END=24419477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr1 24419478 . G . PASS END=24419495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr1 24419496 . A G, 42.81 PASS DP=25;MQ=250.00;MQRankSum=3.932;ReadPosRankSum=1.660;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,8,0:0.320,0.000:25:9,4,0:8,4,0:42:78,0,50,283,608,891:251,0,255:16,0:4.2805e+01,2.4929e-04,5.3000e+01,2.8299e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,4,4:9,8,6,2 chr1 24419497 . T . PASS END=24419506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:25,0 chr1 24419507 . C . PASS END=24419510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24419511 . T . PASS END=24419511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 24419512 . C . PASS END=24419514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 24419515 . C . PASS END=24419515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 24419516 . C . PASS END=24419516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 24419517 . T . PASS END=24419533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 24419534 . C . PASS END=24419535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 24419536 . T . PASS END=24419536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 24419537 . C . PASS END=24419541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 24419542 . A . PASS END=24419542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:24,0 chr1 24419543 . T . PASS END=24419543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24419544 . G . PASS END=24419544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24419545 . C . PASS END=24419546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 24419547 . T . PASS END=24419547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24419548 . G . PASS END=24419551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 24419552 . G . PASS END=24419553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24419554 . C . PASS END=24419554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 24419555 . T . PASS END=24419561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 24419562 . A . PASS END=24419562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 24419563 . G . PASS END=24419565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:28,0 chr1 24419566 . T . PASS END=24419566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:27,0 chr1 24419567 . C . PASS END=24419567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 24419568 . T . PASS END=24419573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 24419574 . C . PASS END=24419578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,923:0,67,255:26,0 chr1 24419579 . C . PASS END=24419579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr1 24419580 . G . PASS END=24419598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,878:0,61,255:25,0 chr1 24421343 . C . PASS END=24421436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1172:0,83,255:40,0 chr1 24421437 . C . PASS END=24421459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:33:0,88,1205:0,88,255:35,0 chr1 24421460 . C . PASS END=24421460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr1 24421461 . G . PASS END=24421462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 24421463 . T . PASS END=24421473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:26,0 chr1 24421474 . G A, 49.17 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.123;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:6,4,0:9,8,0:48:84,0,50,392,536,929:255,0,255:10,0:4.9166e+01,7.4293e-05,5.3000e+01,3.9240e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,5,7:6,9,7,5 chr1 24421475 . T . PASS END=24421475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 24421476 . C . PASS END=24421480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 24421932 . T . PASS END=24421949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,120,1800:0,140,255:40,0 chr1 24421950 . C G, 50.00 PASS DP=57;MQ=250.00;MQRankSum=6.473;ReadPosRankSum=1.971;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,29,0:0.509,0.000:57:14,13,0:14,16,0:47:85,0,47,185,185,185:255,0,255:23,0:5.0000e+01,8.7237e-05,4.9962e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,11,16,13:17,11,14,15 chr1 24421951 . G . PASS END=24421976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,122,255:40,0 chr1 24424413 . T . PASS END=24424483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:31:0,81,1215:0,85,255:40,0 chr1 24424484 . G . PASS END=24424488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:24,0 chr1 24424489 . C . PASS END=24424489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:21,0 chr1 24424490 . T . PASS END=24424501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,884:0,72,255:24,0 chr1 24426170 . C . PASS END=24426178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 24426179 . T . PASS END=24426179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 24426180 . C . PASS END=24426213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,784:0,63,255:26,0 chr1 24426214 . G . PASS END=24426217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 24426218 . T . PASS END=24426219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:26,0 chr1 24426220 . T . PASS END=24426221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 24426222 . C . PASS END=24426256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,62,255:26,0 chr1 24426257 . T . PASS END=24426259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 24426260 . T . PASS END=24426262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24426263 . T . PASS END=24426265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 24432410 . C . PASS END=24432426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 24432427 . T . PASS END=24432427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 24432428 . G . PASS END=24432447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,878:0,62,255:26,0 chr1 24432448 . G . PASS END=24432466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:30,0 chr1 24432467 . T . PASS END=24432468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24432469 . C . PASS END=24432508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 24432509 . G . PASS END=24432522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr1 24432523 . G . PASS END=24432523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr1 24432524 . C . PASS END=24432540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr1 24432541 . C . PASS END=24432542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 24432543 . T . PASS END=24432552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 24432553 . G . PASS END=24432567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 24433563 . C . PASS END=24433572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr1 24433573 . A . PASS END=24433573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 24433574 . G . PASS END=24433591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,576:0,51,255:17,0 chr1 24433592 . T . PASS END=24433592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 24433593 . C . PASS END=24433607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:19,0 chr1 24433608 . G . PASS END=24433608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 24433609 . T . PASS END=24433611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 24433612 . G . PASS END=24433659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr1 24433660 . A . PASS END=24433674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 24433675 . C . PASS END=24433676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 24433677 . C . PASS END=24433680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr1 24433681 . T . PASS END=24433713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 24433714 . T . PASS END=24433714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 24433715 . G . PASS END=24433722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 24434483 . C . PASS END=24434557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:30:0,83,1180:0,83,255:37,0 chr1 24434558 . T . PASS END=24434563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 24434966 . C . PASS END=24434981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 24434982 . G . PASS END=24434982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 24434983 . C . PASS END=24435082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1016:0,81,255:40,0 chr1 24435083 . G . PASS END=24435083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:31,0 chr1 24435084 . G . PASS END=24435085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1279:0,89,255:31,0 chr1 24435086 . C . PASS END=24435086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,2 chr1 24435087 . G . PASS END=24435087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1172:0,36,255:31,2 chr1 24435088 . G . PASS END=24435088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 24435089 . G . PASS END=24435099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 24435100 . A . PASS END=24435109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:23,0 chr1 24435110 . C . PASS END=24435126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,665:0,41,255:19,0 chr1 24447295 . T . PASS END=24447313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,861:0,62,255:26,0 chr1 24447314 . G . PASS END=24447329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:31,0 chr1 24447330 . T . PASS END=24447330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 24447331 . G . PASS END=24447373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1141:0,85,255:35,0 chr1 24447374 . T . PASS END=24447374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:32,0 chr1 24447375 . C . PASS END=24447386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1202:0,86,255:33,0 chr1 24447387 . T . PASS END=24447387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:29,0 chr1 24447388 . C . PASS END=24447397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1200:0,83,255:32,0 chr1 24447398 . T . PASS END=24447398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:29,0 chr1 24447399 . C . PASS END=24447421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,83,255:31,0 chr1 24447422 . A . PASS END=24447423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 24447424 . C . PASS END=24447430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr1 24447431 . C . PASS END=24447467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1111:0,80,255:32,0 chr1 24447468 . G C, 46.40 PASS DP=34;MQ=250.00;MQRankSum=4.820;ReadPosRankSum=-0.921;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,13,0:0.382,0.000:34:11,6,0:10,7,0:45:81,0,47,181,181,181:255,0,255:20,0:4.6395e+01,1.4315e-04,5.0000e+01,1.8117e+02,2.1594e+02,1.8418e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,11,6,7:10,11,5,8 chr1 24447469 . G . PASS END=24447470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 24447471 . A . PASS END=24447471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1141:0,55,255:30,0 chr1 24447472 . A . PASS END=24447505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1227:0,86,255:34,0 chr1 24447506 . T . PASS END=24447533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1194:0,83,255:36,0 chr1 24447534 . G . PASS END=24447534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:34,0 chr1 24447535 . C . PASS END=24447640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:36:0,86,1284:0,86,255:40,0 chr1 24447641 . T . PASS END=24447641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1357:0,73,255:36,0 chr1 24447642 . C . PASS END=24447683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1270:0,89,255:39,0 chr1 24447684 . A . PASS END=24447687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 24447688 . G . PASS END=24447810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1131:0,80,255:36,0 chr1 24447811 . A . PASS END=24447811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1119:0,72,255:30,0 chr1 24447812 . T . PASS END=24447830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1180:0,83,255:31,0 chr1 24447831 . C . PASS END=24447839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,80,255:26,0 chr1 24447840 . C . PASS END=24447842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 24447843 . G . PASS END=24447843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:24,0 chr1 24447844 . A . PASS END=24447844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24447845 . G . PASS END=24447845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24447846 . G . PASS END=24447846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:26,0 chr1 24447847 . G . PASS END=24447872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,953:0,62,255:26,0 chr1 24447873 . A . PASS END=24447873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:20,0 chr1 24447874 . G . PASS END=24447915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 24447916 . C . PASS END=24447923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 24447924 . G . PASS END=24447930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 24447931 . G . PASS END=24447932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 24447933 . A . PASS END=24447933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr1 24447934 . T . PASS END=24448074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:28:0,80,1025:0,80,255:40,0 chr1 24448075 . A . PASS END=24448078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 24448079 . C . PASS END=24448081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24448082 . G . PASS END=24448086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1054:0,74,255:26,0 chr1 24448087 . C . PASS END=24448104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 24448105 . C . PASS END=24448113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 24448114 . G . PASS END=24448114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 24448115 . G . PASS END=24448115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 24448116 . A . PASS END=24448123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 24448124 . A . PASS END=24448126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:25,0 chr1 24448127 . G . PASS END=24448127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 24448128 . G . PASS END=24448130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24448131 . G . PASS END=24448137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1185:0,80,255:27,0 chr1 24448138 . A . PASS END=24448138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:27,0 chr1 24448139 . C . PASS END=24448160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 24448161 . A . PASS END=24448161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1033:0,63,255:25,0 chr1 24448162 . G . PASS END=24448163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 24448164 . C . PASS END=24448189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:23:0,69,892:0,69,255:26,0 chr1 24448190 . A . PASS END=24448190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 24448191 . A . PASS END=24448227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,829:0,66,255:23,0 chr1 24449792 . C . PASS END=24449911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1215:0,93,255:40,0 chr1 24449912 . G . PASS END=24449912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24449913 . T . PASS END=24449913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24454631 . C . PASS END=24454638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:26,0 chr1 24454639 . G . PASS END=24454673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1125:0,80,255:34,0 chr1 24454674 . G . PASS END=24454674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 24454675 . G . PASS END=24454713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1239:0,81,255:37,0 chr1 24454714 . T . PASS END=24454714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:31,0 chr1 24454715 . C . PASS END=24454730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:33,0 chr1 24454731 . G . PASS END=24454731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:26,0 chr1 24454732 . C . PASS END=24454737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr1 24454738 . A . PASS END=24454748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:28:0,70,903:0,70,255:24,0 chr1 24454749 . T . PASS END=24454749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:22,0 chr1 24454750 . C . PASS END=24454764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 24454765 . A . PASS END=24454769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:21:0,45,675:0,52,255:19,0 chr1 24460701 . C . PASS END=24460726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,664:0,60,255:26,0 chr1 24460727 . G . PASS END=24460759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1047:0,84,255:37,0 chr1 24460760 . C . PASS END=24460796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1474:0,104,255:40,0 chr1 24460797 . T G, 169.94 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,23,0:0,18,0:120:208,123,0,1560,123,1560:255,123,0:0,0:1.6994e+02,1.1994e+02,0.0000e+00,4.5000e+02,1.5471e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,19:0,0,20,21 chr1 24460798 . G . PASS END=24460834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:38:0,90,1463:0,90,255:40,0 chr1 24460835 . T . PASS END=24460847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1169:0,88,255:34,0 chr1 24460848 . A . PASS END=24460851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:34:0,75,1125:0,89,255:26,0 chr1 24460852 . G . PASS END=24460858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1170:0,83,255:28,0 chr1 24460859 . C . PASS END=24460859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 24460860 . A . PASS END=24460863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 24460864 . G . PASS END=24460876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,73,255:26,0 chr1 24463621 . T . PASS END=24463621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 24463622 . G . PASS END=24463632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:18,0 chr1 24463633 . A . PASS END=24463633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr1 24463634 . G . PASS END=24463641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 24463642 . T . PASS END=24463648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 24463649 . C . PASS END=24463654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 24463655 . G . PASS END=24463668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 24463669 . C . PASS END=24463669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 24463670 . T . PASS END=24463670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 24463671 . C . PASS END=24463679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 24463680 . A . PASS END=24463680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 24463681 . C . PASS END=24463688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 24463689 . A . PASS END=24463689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 24463690 . C . PASS END=24463764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr1 24463765 . A . PASS END=24463765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:21,0 chr1 24463766 . G . PASS END=24463780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 24463781 . C . PASS END=24463799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,621:0,43,255:19,0 chr1 24465072 . G . PASS END=24465077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:35,0 chr1 24465078 . T . PASS END=24465078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:34,0 chr1 24465079 . A . PASS END=24465204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:36:0,105,1575:0,107,255:40,0 chr1 24469530 . C . PASS END=24469572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1362:0,90,255:40,0 chr1 24483620 . T . PASS END=24483620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 24483621 . C . PASS END=24483621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 24483622 . A . PASS END=24483622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,923:0,50,255:26,0 chr1 24483623 . C . PASS END=24483634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:30,0 chr1 24483635 . A . PASS END=24483635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:28,0 chr1 24483636 . T . PASS END=24483642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1172:0,83,255:32,0 chr1 24483643 . A G, 47.69 PASS DP=34;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=1.172;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,14,0:0.412,0.000:34:11,11,0:9,3,0:47:82,0,50,498,715,1213:255,0,255:19,0:4.7688e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,7,9,5:12,8,8,6 chr1 24483644 . T . PASS END=24483644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 24483645 . G . PASS END=24483645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr1 24483646 . T . PASS END=24483680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:34:0,89,1241:0,89,255:40,0 chr1 24483681 . G . PASS END=24483773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1149:0,82,255:40,0 chr1 24483774 . T . PASS END=24483784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 24483785 . T . PASS END=24483786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24483787 . G . PASS END=24483793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 24483794 . C . PASS END=24483795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24483796 . C . PASS END=24483844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:26,0 chr1 24483845 . G . PASS END=24483852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 24483853 . T . PASS END=24483863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 24483864 . A . PASS END=24483865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24483866 . C . PASS END=24483868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 24483869 . T . PASS END=24483871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24483872 . C . PASS END=24483912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr1 24483913 . A . PASS END=24483913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 24483914 . T . PASS END=24483921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 24483922 . G . PASS END=24483925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 24483926 . A . PASS END=24483965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:23,0 chr1 24483966 . T . PASS END=24483967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 24483968 . G . PASS END=24483970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 24483971 . A . PASS END=24483971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 24483972 . G . PASS END=24483973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24483974 . G . PASS END=24483982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 24483983 . C . PASS END=24484031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,713:0,60,255:24,0 chr1 24484032 . T . PASS END=24484032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 24484033 . C . PASS END=24484091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,784:0,63,255:26,0 chr1 24484092 . C . PASS END=24484095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 24484096 . C . PASS END=24484099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 24484100 . C . PASS END=24484106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24484107 . T . PASS END=24484108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 24484109 . C . PASS END=24484110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24484111 . C . PASS END=24484178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,864:0,62,255:26,0 chr1 24484179 . T . PASS END=24484179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:23,0 chr1 24484180 . C . PASS END=24484188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 24484189 . C . PASS END=24484192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24484193 . A . PASS END=24484193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24484194 . T . PASS END=24484218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:31,0 chr1 24484219 . G . PASS END=24484219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 24484220 . G . PASS END=24484270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1170:0,83,255:36,0 chr1 24484271 . C . PASS END=24484271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:33,0 chr1 24484272 . G . PASS END=24484289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1319:0,95,255:36,0 chr1 24484290 . A . PASS END=24484290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:59:36:0,59,1208:0,59,255:31,0 chr1 24484291 . G . PASS END=24484356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,89,255:35,0 chr1 24484357 . C . PASS END=24484357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 24484358 . A . PASS END=24484358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,855:0,71,255:19,0 chr1 24484359 . G . PASS END=24484366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 24484367 . G . PASS END=24484369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 24484370 . T . PASS END=24484372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24484373 . A . PASS END=24484381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 24485536 . C . PASS END=24485541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr1 24485542 . C . PASS END=24485542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 24485543 . A . PASS END=24485555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1158:0,80,255:32,0 chr1 24485556 . T . PASS END=24485610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1263:0,89,255:37,0 chr1 24485611 . T . PASS END=24485612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:34,0 chr1 24485613 . C . PASS END=24485622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:34,0 chr1 24485623 . T . PASS END=24485623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:32,0 chr1 24485624 . A . PASS END=24485627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 24485628 . G . PASS END=24485628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:30,0 chr1 24485629 . C . PASS END=24485637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1133:0,80,255:29,0 chr1 24485638 . A . PASS END=24485672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:27:0,67,963:0,67,255:26,0 chr1 24485964 . C . PASS END=24485966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 24485967 . G . PASS END=24485967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 24485968 . G . PASS END=24485971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 24485972 . T . PASS END=24485972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,752:0,38,255:22,0 chr1 24485973 . C . PASS END=24485977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:24,0 chr1 24485978 . A . PASS END=24485978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 24485979 . A . PASS END=24485979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 24485980 . G . PASS END=24485983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,906:0,72,255:24,0 chr1 24485984 . C . PASS END=24485984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 24485985 . A . PASS END=24485992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:26,0 chr1 24485993 . T . PASS END=24485994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24485995 . A . PASS END=24485995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 24485996 . G . PASS END=24485998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24485999 . A . PASS END=24485999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:26,0 chr1 24486000 . A . PASS END=24486018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:29,0 chr1 24486019 . A . PASS END=24486019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:26,0 chr1 24486020 . C . PASS END=24486025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1263:0,90,255:33,0 chr1 24486026 . G . PASS END=24486026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 24486027 . T . PASS END=24486100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1164:0,83,255:38,0 chr1 24486101 . T . PASS END=24486102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:28,0 chr1 24486103 . G . PASS END=24486105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 24486106 . A . PASS END=24486107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 24486108 . T . PASS END=24486109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24486110 . A . PASS END=24486111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:27,0 chr1 24486112 . T . PASS END=24486112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 24486113 . G . PASS END=24486113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 24486114 . G . PASS END=24486117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,994:0,70,255:26,0 chr1 24486118 . T . PASS END=24486118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:26,0 chr1 24486119 . A . PASS END=24486119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 24486120 . G . PASS END=24486120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr1 24486121 . G . PASS END=24486122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 24486123 . T . PASS END=24486123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,909:0,53,255:27,0 chr1 24487906 . T . PASS END=24487912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr1 24487913 . T . PASS END=24487917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 24487918 . A . PASS END=24487918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr1 24487919 . G . PASS END=24487920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 24487921 . G . PASS END=24487921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 24487922 . A . PASS END=24487922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 24487923 . A . PASS END=24487923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 24487924 . G . PASS END=24487940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:13,0 chr1 24487941 . G . PASS END=24487943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 24487944 . C . PASS END=24487944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 24487945 . A . PASS END=24487948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 24487949 . G . PASS END=24487949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 24487950 . C . PASS END=24487985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:18,0 chr1 24487986 . G . PASS END=24487986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:14,0 chr1 24487987 . G . PASS END=24487992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 24487993 . G . PASS END=24487997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 24487998 . G . PASS END=24488052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 24488053 . C . PASS END=24488053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 24488054 . C . PASS END=24488061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 24488062 . C . PASS END=24488062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 24488063 . A . PASS END=24488063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 24488064 . C . PASS END=24488064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 24488065 . C . PASS END=24488088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,607:0,51,255:17,0 chr1 24488089 . C . PASS END=24488107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr1 24488108 . T . PASS END=24488109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 24488110 . C . PASS END=24488139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,429:0,39,255:13,0 chr1 24488140 . C . PASS END=24488174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,302:0,24,255:9,0 chr1 24495907 . C . PASS END=24495907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 24495908 . T . PASS END=24495909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 24495910 . C . PASS END=24495910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:26,0 chr1 24495911 . A . PASS END=24495911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24495912 . A . PASS END=24495912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,859:0,70,255:27,0 chr1 24495913 . A . PASS END=24495913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24495914 . A . PASS END=24495914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 24495915 . A . PASS END=24495916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 24495917 . G . PASS END=24495917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 24495918 . T . PASS END=24495933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:30,0 chr1 24495934 . A . PASS END=24495934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 24495935 . C . PASS END=24495941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 24495942 . C . PASS END=24495942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 24495943 . A . PASS END=24495987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1139:0,80,255:36,0 chr1 24495988 . A . PASS END=24495988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1083:0,77,255:35,0 chr1 24495989 . C . PASS END=24496030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:36:0,87,1350:0,87,255:40,0 chr1 24496031 . T . PASS END=24496031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:32,0 chr1 24496032 . A . PASS END=24496072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1194:0,83,255:34,0 chr1 24496073 . C . PASS END=24496078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 24496079 . A . PASS END=24496079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:21,0 chr1 24496080 . C . PASS END=24496086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:23:0,63,945:0,69,255:22,0 chr1 24496087 . G . PASS END=24496091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,798:0,50,255:20,0 chr1 24506029 . A . PASS END=24506115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:95:40:0,95,1446:0,95,255:40,0 chr1 24506116 . A . PASS END=24506116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1573:0,74,255:40,0 chr1 24506117 . T . PASS END=24506117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 24507221 . C . PASS END=24507222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 24507223 . C . PASS END=24507223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 24507224 . T . LowGQ END=24507224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,520:1,0,255:16,0 chr1 24507225 . G . PASS END=24507225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 24507226 . A . PASS END=24507226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:16,0 chr1 24507227 . T . PASS END=24507227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 24507228 . A . PASS END=24507228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,562:0,54,255:18,0 chr1 24507229 . G . LowGQ END=24507229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,485:9,0,255:15,0 chr1 24507230 . G . PASS END=24507232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:18,0 chr1 24507233 . A . LowGQ END=24507233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,518:7,0,255:14,0 chr1 24507234 . C . PASS END=24507235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 24507236 . A . PASS END=24507236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24507237 . A . PASS END=24507237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:19,0 chr1 24507238 . A . PASS END=24507238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24507239 . T . PASS END=24507239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,692:0,22,255:20,0 chr1 24507240 . A . PASS END=24507241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr1 24507242 . G . PASS END=24507242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24507243 . T . PASS END=24507243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 24507244 . C . PASS END=24507244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,673:0,5,255:19,0 chr1 24507245 . A . PASS END=24507248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 24507249 . C . PASS END=24507249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 24507250 . C . PASS END=24507250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 24507251 . T . PASS END=24507251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:23,0 chr1 24507252 . G . PASS END=24507258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 24507259 . G . PASS END=24507260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr1 24507261 . C . PASS END=24507263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 24507264 . G . PASS END=24507264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 24507265 . C . PASS END=24507271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 24507272 . A . PASS END=24507272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:21,0 chr1 24507273 . G . PASS END=24507275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 24507276 . A . PASS END=24507276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:21,0 chr1 24507277 . T . PASS END=24507277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 24507278 . G . PASS END=24507278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 24507279 . T . PASS END=24507281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 24507282 . G . PASS END=24507282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 24507283 . G . PASS END=24507297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 24507298 . C . PASS END=24507298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 24507299 . T . PASS END=24507299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24507300 . G . PASS END=24507324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 24507325 . A . PASS END=24507333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 24507334 . A . PASS END=24507344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 24513681 . C . PASS END=24513695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 24513696 . G . PASS END=24513696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 24513697 . C . PASS END=24513699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 24513700 . G . PASS END=24513700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 24513701 . C . PASS END=24513701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 24513702 . A . PASS END=24513702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 24513703 . C . PASS END=24513703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 24513704 . A . PASS END=24513722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,260:0,27,255:9,0 chr1 24513723 . G . PASS END=24513723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 24513724 . C . PASS END=24513730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 24513731 . C . PASS END=24513733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 24513734 . G . PASS END=24513734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 24513735 . C . PASS END=24513737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,197:0,21,197:7,0 chr1 24513738 . T . PASS END=24513738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr1 24646042 . A . PASS END=24646058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,107,1800:0,107,255:40,0 chr1 24649576 . A . PASS END=24649607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,145,255:40,0 chr1 24657916 . T . PASS END=24658090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:83:35:0,83,1257:0,83,255:40,0 chr1 24658091 . G . PASS END=24658091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1141:0,72,255:30,0 chr1 24658092 . A . PASS END=24658102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:32,0 chr1 24661132 . C . PASS END=24661132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1419:0,114,255:38,0 chr1 24661135 . G . PASS END=24661196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:38:0,96,1421:0,110,255:40,0 chr1 24662972 . G . PASS END=24663008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,892:0,65,255:26,0 chr1 24663009 . C . PASS END=24663032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1086:0,80,255:29,0 chr1 24663033 . A . PASS END=24663033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 24663034 . T . PASS END=24663044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1050:0,87,255:31,0 chr1 24663045 . A . PASS END=24663045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:30,0 chr1 24663046 . C . PASS END=24663048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1178:0,93,255:31,0 chr1 24663049 . A . PASS END=24663049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 24663050 . G . PASS END=24663061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 24663062 . A . PASS END=24663062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 24663063 . A . PASS END=24663071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 24663072 . T . PASS END=24663072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 24663073 . A . PASS END=24663089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 24663090 . A . PASS END=24663090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 24663091 . A . PASS END=24663095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24663096 . A . PASS END=24663096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:26,0 chr1 24663097 . A . PASS END=24663107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr1 24663108 . T . PASS END=24663111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 24663112 . A . PASS END=24663122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 24663123 . C . PASS END=24663142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 24663143 . T . PASS END=24663217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,621:0,44,255:19,0 chr1 24663218 . T . PASS END=24663223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 24663224 . T . PASS END=24663224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 24663225 . G . PASS END=24663304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,657:0,63,255:24,0 chr1 24663305 . T . PASS END=24663317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:18,0 chr1 24663568 . T . PASS END=24663579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:74:25:0,74,767:0,74,255:25,0 chr1 24663580 . C . PASS END=24663580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 24663581 . C . PASS END=24663583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,842:0,75,255:25,0 chr1 24663584 . A . PASS END=24663584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:23,0 chr1 24663585 . T . PASS END=24663589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,881:0,75,255:26,0 chr1 24663590 . T . PASS END=24663590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:25,0 chr1 24663591 . G . PASS END=24663612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,911:0,78,255:26,0 chr1 24663613 . T . PASS END=24663613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,815:0,34,255:21,0 chr1 24663614 . G . PASS END=24663617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 24663618 . A . PASS END=24663618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:20,0 chr1 24663619 . G . PASS END=24663630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 24663631 . A . PASS END=24663631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 24663632 . G . PASS END=24663633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 24663634 . C . PASS END=24663634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 24663635 . T . PASS END=24663639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr1 24663640 . A . PASS END=24663641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 24664126 . T . PASS END=24664129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,560:0,48,255:18,0 chr1 24664130 . T . PASS END=24664130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:17,0 chr1 24664131 . T . PASS END=24664132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 24664133 . G . PASS END=24664143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:23,0 chr1 24664144 . G . PASS END=24664144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 24664145 . G . PASS END=24664149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:25,0 chr1 24664150 . C . PASS END=24664169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 24664170 . A . PASS END=24664170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,897:0,70,255:26,0 chr1 24664171 . G . PASS END=24664173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24664174 . A . PASS END=24664174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 24664175 . G . PASS END=24664176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 24664177 . C . PASS END=24664182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 24664183 . A . PASS END=24664205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,999:0,90,255:30,0 chr1 24664206 . G . PASS END=24664209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24664210 . G . PASS END=24664237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1208:0,83,255:30,0 chr1 24664238 . G . PASS END=24664271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,878:0,61,255:26,0 chr1 24664272 . A . PASS END=24664272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 24664273 . A . PASS END=24664273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 24664274 . G . PASS END=24664274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 24664275 . T . PASS END=24664278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 24664279 . G . PASS END=24664279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 24664280 . G . PASS END=24664280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 24664482 . A . PASS END=24664482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 24664483 . G . PASS END=24664492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 24664493 . G . PASS END=24664493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 24664494 . G . PASS END=24664496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 24664497 . G . PASS END=24664497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 24664498 . T . PASS END=24664524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:31,0 chr1 24664525 . A . PASS END=24664526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:29,0 chr1 24664527 . C . PASS END=24664563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1097:0,80,255:31,0 chr1 24664564 . C . PASS END=24664566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr1 24664567 . C . PASS END=24664569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24664570 . C . PASS END=24664570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 24664571 . C . PASS END=24664571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24664572 . A . PASS END=24664593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,74,255:26,0 chr1 24666158 . C . PASS END=24666252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,140,255:40,0 chr1 24668605 . G . PASS END=24668610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 24668611 . A . PASS END=24668611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 24668612 . T . PASS END=24668763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,866:0,81,255:40,0 chr1 24669184 . G . PASS END=24669189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 24669190 . G . PASS END=24669192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 24669193 . A . PASS END=24669207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr1 24669208 . G . PASS END=24669220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:30,0 chr1 24669221 . A . PASS END=24669221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 24669222 . G . PASS END=24669231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 24669232 . A . PASS END=24669232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 24669233 . A . PASS END=24669238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 24669239 . A . PASS END=24669239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,991:0,62,255:30,0 chr1 24669240 . G . PASS END=24669249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1155:0,80,255:29,0 chr1 24669250 . T . PASS END=24669263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1022:0,68,255:26,0 chr1 24669382 . G . PASS END=24669516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:35:0,95,1371:0,95,255:40,0 chr1 24671387 . G . PASS END=24671417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,146,255:40,0 chr1 24671418 . A . PASS END=24671421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 24673043 . G . PASS END=24673046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 24673047 . C . PASS END=24673064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:23,0 chr1 24673065 . T . PASS END=24673065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 24673066 . C . PASS END=24673070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 24673071 . T . PASS END=24673072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,820:0,53,255:21,0 chr1 24673073 . C . PASS END=24673075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 24673076 . T . PASS END=24673076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 24673077 . G . PASS END=24673078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 24673079 . G . PASS END=24673079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 24673080 . G . PASS END=24673082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 24673083 . T . PASS END=24673083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,592:0,54,255:21,0 chr1 24673084 . T . PASS END=24673084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 24673085 . T . PASS END=24673085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 24673086 . G . PASS END=24673090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 24673091 . T . PASS END=24673091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 24673092 . C . PASS END=24673092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 24673093 . T . PASS END=24673093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 24673094 . G . PASS END=24673116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,862:0,61,255:25,0 chr1 24673117 . G . PASS END=24673117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 24673118 . C . PASS END=24673119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 24673120 . A . PASS END=24673120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 24673121 . C . PASS END=24673122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,914:0,72,255:24,0 chr1 24673123 . T . PASS END=24673123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 24673124 . T . PASS END=24673124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 24673125 . C . PASS END=24673127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 24673128 . A . PASS END=24673128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 24673129 . G . PASS END=24673130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 24673131 . G . PASS END=24673131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 24673958 . T . PASS END=24673970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:30,0 chr1 24673971 . G . PASS END=24673971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:29,0 chr1 24673972 . C . PASS END=24673972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 24673973 . G . PASS END=24673973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 24673974 . G . PASS END=24674002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1072:0,80,255:30,0 chr1 24674003 . T . PASS END=24674026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr1 24674027 . A . PASS END=24674027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 24674028 . G . PASS END=24674035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,892:0,72,255:24,0 chr1 24674036 . G . PASS END=24674043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,50,255:19,0 chr1 24676548 . A . PASS END=24676612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,99,1420:0,99,255:40,0 chr1 24680864 . A . PASS END=24680976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:33:0,84,1309:0,84,255:40,0 chr1 24680977 . A . PASS END=24680978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:25,0 chr1 24685033 . C . PASS END=24685099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1233:0,81,255:37,0 chr1 24685100 . T . PASS END=24685109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:32:0,72,1080:0,96,255:25,0 chr1 24687341 . C . PASS END=24687347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 24687348 . A . PASS END=24687348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 24687349 . G . PASS END=24687357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 24687358 . G . PASS END=24687371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:25,0 chr1 24687372 . C . PASS END=24687372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 24687373 . G . PASS END=24687374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 24687375 . T . PASS END=24687375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,660:0,25,255:20,0 chr1 24687376 . G . PASS END=24687387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,878:0,61,255:26,0 chr1 24687388 . G . PASS END=24687388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24687389 . T . PASS END=24687389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 24687390 . A . PASS END=24687394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24687395 . A . PASS END=24687395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 24687396 . C . PASS END=24687406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,959:0,87,255:30,0 chr1 24687407 . C . PASS END=24687411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1033:0,73,255:26,0 chr1 24687412 . G . PASS END=24687419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1161:0,80,255:30,0 chr1 24687420 . A . PASS END=24687421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,951:0,76,255:29,0 chr1 24687422 . G . PASS END=24687429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 24687430 . G . PASS END=24687430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 24687431 . G . PASS END=24687443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1178:0,83,255:29,0 chr1 24687444 . C . PASS END=24687447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 24687448 . A . PASS END=24687489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1111:0,84,255:31,0 chr1 24687490 . A . PASS END=24687501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:26,0 chr1 24687502 . T . PASS END=24687507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 24687508 . G . PASS END=24687508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 24687509 . A . PASS END=24687509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 24687510 . G . PASS END=24687521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr1 24687522 . G . PASS END=24687531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:18,0 chr1 24690675 . G . PASS END=24690686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 24690687 . C . PASS END=24690687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 24690688 . C . PASS END=24690688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 24690689 . T . PASS END=24690689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 24690690 . C . PASS END=24690690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 24690691 . C . PASS END=24690691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 24690692 . A . PASS END=24690700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 24690701 . T . PASS END=24690710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 24690711 . C . PASS END=24690721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,853:0,69,255:24,0 chr1 24690722 . A . PASS END=24690722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 24690723 . C . PASS END=24690731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1014:0,68,255:26,0 chr1 24690732 . A . PASS END=24690735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1064:0,84,255:29,0 chr1 24690736 . T . PASS END=24690736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 24690737 . C . PASS END=24690822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1072:0,83,255:33,0 chr1 24690823 . A . PASS END=24690831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:23,0 chr1 24690832 . A . PASS END=24690850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:19:0,46,690:0,46,255:18,0 chr1 24690851 . A . PASS END=24690851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 24690852 . C . PASS END=24690856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 24690857 . A . PASS END=24690861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 24695837 . T . PASS END=24695885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,972:0,81,255:31,0 chr1 24695886 . T . PASS END=24695886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 24695887 . T . PASS END=24695890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 24695891 . T . PASS END=24695891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 24695892 . C . PASS END=24695897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 24696164 . G . PASS END=24696166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,108,1709:0,108,255:40,0 chr1 24696167 . A . PASS END=24696167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1681:0,75,255:40,0 chr1 24696168 . A . PASS END=24696171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,108,1696:0,108,255:40,0 chr1 24696172 . A . PASS END=24696172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:50:46:0,50,1411:0,50,255:40,0 chr1 24696173 . G . PASS END=24696329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,102,1553:0,102,255:40,0 chr1 24700192 . C . PASS END=24700294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,91,255:40,0 chr1 24700295 . A . PASS END=24700300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:29:0,66,990:0,83,255:23,0 chr1 24706101 . T . PASS END=24706112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:83:0,120,1800:0,219,255:40,0 chr1 24706113 . G A, 48.85 PASS DP=88;MQ=250.00;MQRankSum=8.022;ReadPosRankSum=4.746;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,39,0:0.443,0.000:88:29,18,0:20,21,0:47:84,0,50,1349,1752,3102:255,0,255:40,0:4.8849e+01,7.8435e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,22,26,13:25,24,23,16 chr1 24706114 . T . PASS END=24706150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:89:0,120,1800:0,242,255:40,0 chr1 24706151 . A . PASS END=24706231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:80:0,120,1800:0,195,255:40,0 chr1 24706232 . C . PASS END=24706268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:80:0,120,1800:0,224,255:40,0 chr1 24706269 . A G, 41.98 PASS DP=80;MQ=249.01;MQRankSum=7.338;ReadPosRankSum=1.155;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,28,0:0.350,0.000:80:27,17,0:25,11,0:42:77,0,50,968,1814,2781:255,0,255:40,0:4.1983e+01,2.9692e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,33,6,22:22,30,13,15 chr1 24706270 . T . PASS END=24706291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,168,255:40,0 chr1 24706292 . T C, 42.57 PASS DP=56;MQ=250.00;MQRankSum=6.147;ReadPosRankSum=3.138;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,20,0:0.357,0.000:56:19,13,0:17,7,0:42:77,0,50,678,1279,1958:255,0,255:34,0:4.2570e+01,2.6197e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,25,3,17:16,20,10,10 chr1 24706293 . G . PASS END=24706313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,121,255:40,0 chr1 24710392 . C . PASS END=24710474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:32:0,86,1233:0,86,255:40,0 chr1 24710475 . C . PASS END=24710493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,841:0,61,255:26,0 chr1 24718051 . C . PASS END=24718169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:51:0,119,1800:0,119,255:40,0 chr1 24727809 . C . PASS END=24727946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,117,1800:0,117,255:40,2 chr1 24740214 . A . PASS END=24740264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1280:0,81,255:39,0 chr1 24741401 . C . PASS END=24741415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1280:0,92,255:38,0 chr1 24741416 . T . PASS END=24741416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 24741417 . C . PASS END=24741546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1215:0,88,255:40,0 chr1 24741547 . T . PASS END=24741547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 24742305 . A . PASS END=24742306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 24742307 . G . PASS END=24742311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24742312 . A . PASS END=24742312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 24742313 . G . PASS END=24742321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 24742322 . T . PASS END=24742322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 24742323 . C . PASS END=24742394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1141:0,90,255:39,0 chr1 24746038 . A . PASS END=24746039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 24746040 . G . PASS END=24746066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,854:0,63,255:25,0 chr1 24746067 . G . PASS END=24746067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:23,0 chr1 24746068 . C . PASS END=24746069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 24746070 . G . PASS END=24746070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:25,0 chr1 24746071 . C . PASS END=24746071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 24746072 . A . PASS END=24746104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,964:0,81,255:31,0 chr1 24746105 . T . PASS END=24746105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:27,0 chr1 24746106 . A . PASS END=24746112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 24746113 . G . PASS END=24746130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,850:0,64,255:26,0 chr1 24766662 . G . PASS END=24766702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1073:0,82,255:32,0 chr1 24766703 . C . PASS END=24766703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:30,0 chr1 24766704 . G . PASS END=24766709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 24766710 . A . PASS END=24766710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 24766711 . G . PASS END=24766730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 24768545 . A . PASS END=24768546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24768547 . G . PASS END=24768713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1132:0,80,255:40,0 chr1 24768714 . T . PASS END=24768716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 24771675 . C . PASS END=24771734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,162,255:40,0 chr1 24775971 . G . PASS END=24775972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:18,0 chr1 24775973 . C . PASS END=24775973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 24775974 . G . PASS END=24775987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:19,0 chr1 24775988 . T . PASS END=24776002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr1 24776003 . T . PASS END=24776024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 24776025 . T . PASS END=24776025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 24776026 . G . PASS END=24776031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 24776032 . G . PASS END=24776042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 24776043 . C . PASS END=24776043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 24776044 . C . PASS END=24776059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:13,0 chr1 24776060 . A . PASS END=24776060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 24776061 . T . PASS END=24776080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 24776081 . A . PASS END=24776082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 24776083 . G . PASS END=24776083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 24776084 . C . PASS END=24776087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 24776088 . T . PASS END=24776088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 24776089 . C . PASS END=24776092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 24776093 . A . PASS END=24776093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 24776094 . G . PASS END=24776108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,27,255:9,0 chr1 24776109 . T . PASS END=24776109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 24776110 . G . PASS END=24776112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 24776113 . C . PASS END=24776116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 24779898 . C . PASS END=24779909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1307:0,108,255:37,0 chr1 24779910 . A . PASS END=24779910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:36,0 chr1 24779911 . T . PASS END=24779916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:37:0,98,1352:0,98,255:37,0 chr1 24779917 . T . PASS END=24779917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 24779918 . C . PASS END=24779991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1305:0,89,255:40,0 chr1 24779992 . T . PASS END=24779992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1144:0,74,255:28,0 chr1 24779993 . T . PASS END=24779994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,89,255:30,0 chr1 24782628 . G . PASS END=24782763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1305:0,90,255:40,0 chr1 24784224 . C . PASS END=24784240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:37:0,94,1207:0,94,255:40,0 chr1 24784241 . C . PASS END=24784299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:35:0,92,1296:0,92,255:40,0 chr1 24784300 . A . PASS END=24784300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:31,0 chr1 24784301 . G . PASS END=24784314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:33,0 chr1 24784315 . A . PASS END=24784315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 24784316 . A . PASS END=24784317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 24784318 . T . PASS END=24784318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr1 24784319 . G . PASS END=24784320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 24784321 . C . PASS END=24784323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 24785378 . G . PASS END=24785466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,101,1755:0,101,255:40,0 chr1 24786971 . G . PASS END=24787034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:36:0,82,1322:0,82,255:40,0 chr1 24790516 . G . PASS END=24790610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:35:0,87,1209:0,89,255:40,0 chr1 24792494 . A . PASS END=24792579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,139,255:40,0 chr1 24795476 . G . PASS END=24795477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,978:0,78,255:26,0 chr1 24795478 . A . PASS END=24795479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 24795480 . G . PASS END=24795480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 24795481 . C . PASS END=24795644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1127:0,82,255:40,0 chr1 24795645 . C . PASS END=24795645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 24795646 . C . PASS END=24795659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:17:0,42,630:0,51,255:16,0 chr1 24795660 . C . PASS END=24795667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:13,0 chr1 24795668 . A . PASS END=24795669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:15:0,27,405:0,45,255:9,0 chr1 24795670 . G . PASS END=24795672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 24795673 . T . PASS END=24795675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 24840863 . A . PASS END=24840897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1294:0,89,255:38,0 chr1 24840898 . C . PASS END=24840898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1286:0,59,255:36,0 chr1 24840899 . C . PASS END=24841057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:38:0,90,1350:0,90,255:40,0 chr1 24857708 . G . PASS END=24857880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:37:0,84,1260:0,95,255:40,0 chr1 24857881 . G . PASS END=24857881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 24859573 . G . PASS END=24859573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 24859574 . T . PASS END=24859574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 24859575 . G . PASS END=24859579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 24859580 . T . PASS END=24859595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 24859596 . G . PASS END=24859616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,541:0,42,255:19,0 chr1 24859617 . G A, 28.31 PASS DP=21;MQ=250.00;MQRankSum=3.464;ReadPosRankSum=2.686;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,6,0:0.286,0.000:21:7,4,0:8,2,0:28:63,0,50,215,536,751:169,0,255:15,0:2.8315e+01,6.4281e-03,5.3006e+01,2.1473e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,6,0:6,9,4,2 chr1 24859618 . C . PASS END=24859664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,747:0,63,255:24,0 chr1 24859665 . G A, 40.09 PASS DP=24;MQ=250.00;MQRankSum=3.747;ReadPosRankSum=1.588;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,7,0:0.292,0.000:24:7,4,0:10,3,0:40:75,0,50,214,592,806:161,0,255:16,0:4.0090e+01,4.4707e-04,5.3000e+01,2.1359e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,4,3:5,12,3,4 chr1 24859666 . G . PASS END=24859685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 24859686 . A . PASS END=24859686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 24859687 . G . PASS END=24859696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 24859697 . C . PASS END=24859702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 24859703 . T . PASS END=24859708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:20,0 chr1 24859709 . A . PASS END=24859715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:16,0 chr1 24859716 . A . PASS END=24859733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,427:0,36,255:13,0 chr1 24859734 . A . PASS END=24859734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 24859735 . T . PASS END=24859735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 24859736 . T . PASS END=24859736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 24859737 . G . PASS END=24859741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 24859742 . C . PASS END=24859744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 24861583 . G . PASS END=24861588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr1 24861589 . A . PASS END=24861598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 24861599 . T . PASS END=24861599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 24861600 . C . PASS END=24861601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 24861602 . C . PASS END=24861602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr1 24861603 . G . PASS END=24861605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr1 24861606 . G . PASS END=24861606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 24861607 . G . PASS END=24861613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:25,0 chr1 24861614 . G . PASS END=24861623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 24861624 . A . PASS END=24861624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 24861625 . G . PASS END=24861666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1025:0,84,255:34,0 chr1 24861667 . A . PASS END=24861667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:27,0 chr1 24861668 . A . PASS END=24861675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1157:0,93,255:31,0 chr1 24861676 . A . PASS END=24861676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:29,0 chr1 24861677 . A . PASS END=24861699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1046:0,80,255:32,0 chr1 24861700 . A . PASS END=24861703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 24861704 . G A, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=3.894;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,18,0:0.562,0.000:32:7,8,0:7,10,0:48:85,0,49,612,501,1113:255,0,255:10,0:5.0000e+01,7.0669e-05,5.2006e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,6,12:6,8,8,10 chr1 24861705 . A . PASS END=24861711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 24861712 . C . PASS END=24861726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1011:0,84,255:28,0 chr1 24861727 . C . PASS END=24861737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:26,0 chr1 24861738 . G . PASS END=24861741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr1 24861742 . C . PASS END=24861750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,49,255:16,0 chr1 24861751 . T . PASS END=24861752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 24861753 . G . PASS END=24861754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 24861755 . T . PASS END=24861762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 24861763 . T . PASS END=24861763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,443:0,15,255:10,0 chr1 24861764 . G . PASS END=24861766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:12,0 chr1 24861767 . A . PASS END=24861767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:15:0,21,315:0,45,255:7,0 chr1 24921922 . A . PASS END=24922003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1172:0,83,255:40,0 chr1 24927431 . G . PASS END=24927515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,117,1755:0,131,255:40,0 chr1 24932097 . G . PASS END=24932102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 24932103 . G . PASS END=24932103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 24932104 . A . PASS END=24932108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,566:0,51,255:17,0 chr1 24932109 . G . PASS END=24932109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 24932110 . A . PASS END=24932122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:19,0 chr1 24932123 . A . PASS END=24932123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,582:0,26,255:18,0 chr1 24932124 . G . PASS END=24932144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr1 24932145 . C . PASS END=24932145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:17,0 chr1 24932146 . G . PASS END=24932151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 24932152 . T . PASS END=24932152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:19,0 chr1 24932153 . C . PASS END=24932160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 24932161 . G . PASS END=24932175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 24932176 . G . PASS END=24932199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 24932200 . A . PASS END=24932200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:13,0 chr1 24932201 . C . PASS END=24932201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 24932202 . C . PASS END=24932208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 24932209 . C . PASS END=24932216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr1 24932217 . C . PASS END=24932217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 24932218 . G . PASS END=24932219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 24932220 . C . PASS END=24932224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 24932225 . T . PASS END=24932225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 24932226 . G . PASS END=24932229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 24932230 . A . PASS END=24932230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:12,0 chr1 24932231 . C . PASS END=24932231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 24932232 . G . PASS END=24932232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 24932233 . C . PASS END=24932236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 24932237 . G . PASS END=24932238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 24969818 . A . PASS END=24969829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 24969830 . T . PASS END=24969830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:10,0 chr1 24969831 . T . PASS END=24969832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 24969833 . T . PASS END=24969833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 24969834 . T . PASS END=24969838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 24970038 . A . PASS END=24970039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:3:25:0,3,721:0,3,255:22,0 chr1 24970040 . G . PASS END=24970042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,735:0,20,255:22,0 chr1 24970043 . C . PASS END=24970044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 24970045 . C . PASS END=24970048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,856:0,61,255:24,0 chr1 24970049 . T . PASS END=24970049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:14:26:0,14,798:0,14,255:22,0 chr1 24970050 . A . PASS END=24970050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:23,0 chr1 24970051 . C . PASS END=24970052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 24970053 . C . PASS END=24970053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:23,0 chr1 24970054 . G . PASS END=24970054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 24970055 . G . PASS END=24970055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,731:0,20,255:22,0 chr1 24970056 . C . PASS END=24970056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,811:0,44,255:24,0 chr1 24970057 . G . PASS END=24970057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 24970058 . G . PASS END=24970058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,746:0,6,255:22,0 chr1 24970059 . C . PASS END=24970059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 24970060 . G . PASS END=24970060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:23,0 chr1 24970061 . A . PASS END=24970061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,836:0,20,255:23,0 chr1 24970062 . C . PASS END=24970062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,780:0,36,255:24,0 chr1 24970063 . G . PASS END=24970064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 24970065 . T . PASS END=24970065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:24,0 chr1 24970066 . G . PASS END=24970066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 24970067 . G . PASS END=24970067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,795:0,36,255:23,0 chr1 24970068 . C . PASS END=24970069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,776:0,20,255:23,0 chr1 24970070 . G . PASS END=24970070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,781:0,3,255:22,0 chr1 24970071 . G . PASS END=24970071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:14:25:0,14,762:0,14,255:23,0 chr1 24970072 . A . PASS END=24970073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 24970074 . A . PASS END=24970074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,793:0,36,255:23,0 chr1 24970075 . A . PASS END=24970075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 24970076 . T . PASS END=24970076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,721:0,25,255:22,0 chr1 24970077 . G . PASS END=24970077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:23,0 chr1 24970078 . G . PASS END=24970079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 24970080 . G . PASS END=24970081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 24970082 . C . PASS END=24970082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,870:0,75,255:25,0 chr1 24970083 . G . PASS END=24970083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 24970084 . G . PASS END=24970085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 24970086 . A . PASS END=24970086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 24970087 . A . PASS END=24970096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,939:0,64,255:25,0 chr1 24970097 . A . PASS END=24970097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,925:0,54,255:22,0 chr1 24970098 . T . PASS END=24970098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:22,0 chr1 24970099 . G . PASS END=24970099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,843:0,9,255:21,0 chr1 24970100 . G . PASS END=24970100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:22,0 chr1 24970101 . T . PASS END=24970102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,862:0,61,255:22,0 chr1 24970103 . C . PASS END=24970103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,864:0,42,255:21,0 chr1 24970104 . C . PASS END=24970104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 24970105 . T . PASS END=24970107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:21,0 chr1 24970108 . C . PASS END=24970108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 24970109 . T . PASS END=24970110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 24970111 . C . PASS END=24970114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 24970115 . C . PASS END=24970115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 24970116 . C . PASS END=24970117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 24970118 . G . PASS END=24970118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:18,0 chr1 24970119 . C . PASS END=24970120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 24970121 . T . PASS END=24970121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:18,0 chr1 24970122 . G . PASS END=24970125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,792:0,52,255:18,0 chr1 24970126 . G . PASS END=24970126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:18,0 chr1 24970127 . G . PASS END=24970127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 24970128 . G . PASS END=24970131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr1 24970132 . G . PASS END=24970132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr1 24970133 . C . PASS END=24970139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 24970140 . A . PASS END=24970140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:17,0 chr1 24970141 . G . PASS END=24970142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:18,0 chr1 24970143 . G . PASS END=24970143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr1 24970144 . C . PASS END=24970161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,621:0,40,255:18,0 chr1 24970162 . C . PASS END=24970162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,712:0,19,255:16,0 chr1 24970163 . C . PASS END=24970190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,706:0,57,255:19,0 chr1 24970191 . G . PASS END=24970191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 24970192 . T . PASS END=24970202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 24970203 . A . PASS END=24970203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 24970204 . G . PASS END=24970223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 24972475 . G . PASS END=24972564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,120,1800:0,157,255:40,0 chr1 24973158 . G . PASS END=24973280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,113,1582:0,113,255:40,0 chr1 24973570 . G . PASS END=24973575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr1 24975350 . A . PASS END=24975355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,103,1238:0,103,255:40,0 chr1 24975356 . G . PASS END=24975356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1203:0,70,255:36,0 chr1 24975357 . A . PASS END=24975499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1215:0,90,255:40,0 chr1 24975500 . G . PASS END=24975500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 24975501 . A . PASS END=24975501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24975502 . A . PASS END=24975503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 24975504 . A . PASS END=24975506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24975507 . T . PASS END=24975507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 24975508 . A . PASS END=24975514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 24975515 . A . PASS END=24975520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:26,0 chr1 24976462 . A . PASS END=24976577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,4:110:99:82:0,120,1800:0,247,255:40,0 chr1 24977900 . A . PASS END=24977912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 24977913 . T . PASS END=24977919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 24977920 . C . PASS END=24977941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:19,0 chr1 24977942 . T . PASS END=24977948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 24977949 . A . PASS END=24977949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 24977950 . G . PASS END=24977958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,771:0,69,255:25,0 chr1 24977959 . A . PASS END=24977959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 24977960 . G . PASS END=24977970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:26,0 chr1 24977971 . C . PASS END=24977973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24977974 . G . PASS END=24977974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 24977975 . A . PASS END=24977985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 24977986 . A . PASS END=24977986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 24977987 . C . PASS END=24977987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24977988 . A . PASS END=24977988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 24977989 . G . PASS END=24977990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24977991 . A . PASS END=24977991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 24977992 . C . PASS END=24978002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 24978003 . A . PASS END=24978003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 24978004 . G . PASS END=24978055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1152:0,86,255:34,0 chr1 24978056 . T . PASS END=24978078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:27:0,69,1024:0,71,255:26,0 chr1 24978079 . C . PASS END=24978094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:18:0,45,675:0,54,255:19,0 chr1 24978095 . T . PASS END=24978095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 24978096 . T . PASS END=24978099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 24978100 . C . PASS END=24978103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 24978925 . T . PASS END=24978925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1235:0,78,255:33,0 chr1 24978926 . G . PASS END=24978931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1169:0,92,255:36,0 chr1 24978932 . C . PASS END=24978932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1012:0,44,255:33,0 chr1 24978933 . T . PASS END=24978940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1160:0,91,255:36,0 chr1 24978941 . C . PASS END=24978941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:35,0 chr1 24978942 . C . PASS END=24978943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1368:0,111,255:37,0 chr1 24978944 . A . PASS END=24978944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1244:0,94,255:36,0 chr1 24978945 . A . PASS END=24978945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1305:0,78,255:38,0 chr1 24978946 . A . PASS END=24979015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1389:0,96,255:40,0 chr1 24979016 . A . PASS END=24979016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:69:60:0,69,1871:0,69,255:40,0 chr1 24979017 . A . PASS END=24979090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1350:0,81,255:40,0 chr1 24979091 . C . PASS END=24979119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,894:0,64,255:25,0 chr1 24979404 . A . PASS END=24979406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 24979407 . G . PASS END=24979411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 24979412 . C . PASS END=24979412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 24979413 . A . PASS END=24979413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 24979414 . C . PASS END=24979472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1055:0,84,255:36,0 chr1 24979473 . A . PASS END=24979473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1185:0,75,255:33,0 chr1 24979474 . A . PASS END=24979491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,92,255:35,0 chr1 24979492 . A . PASS END=24979492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:27,0 chr1 24979493 . G . PASS END=24979506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,90,255:30,0 chr1 24979507 . A . PASS END=24979510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1084:0,74,255:27,0 chr1 24979511 . C . PASS END=24979511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:22,0 chr1 24979512 . T . PASS END=24979521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:23,0 chr1 24979522 . C . PASS END=24979522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 24979523 . G . PASS END=24979523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:21,0 chr1 24980797 . G . PASS END=24980834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,174,255:40,0 chr1 24981346 . A . PASS END=24981349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr1 24981350 . A . PASS END=24981350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 24981351 . G . PASS END=24981360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 24981361 . A . PASS END=24981361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,582:0,26,255:18,0 chr1 24981362 . G . PASS END=24981364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 24981365 . T . PASS END=24981373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:26,0 chr1 24981374 . G . PASS END=24981375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 24981376 . G . PASS END=24981376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 24981377 . A . PASS END=24981379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:30,0 chr1 24981380 . A . PASS END=24981380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,890:0,51,255:29,0 chr1 24981381 . G . PASS END=24981381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 24981382 . C . PASS END=24981382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:39:30:0,39,696:0,39,255:27,0 chr1 24981383 . T . PASS END=24981384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:74:30:0,74,886:0,74,255:31,0 chr1 24981385 . A . PASS END=24981606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,925:0,81,255:40,0 chr1 24981607 . A . PASS END=24981607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr1 24981608 . A . PASS END=24981610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 24981611 . T . PASS END=24981611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 24981612 . C . PASS END=24981620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 24982143 . A . PASS END=24982154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,209,255:40,0 chr1 24987210 . T . PASS END=24987290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:52:0,120,1800:0,135,255:40,0 chr1 24987801 . A . PASS END=24987810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:37:0,103,1290:0,103,255:40,0 chr1 24987811 . A . PASS END=24987811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1075:0,53,255:36,0 chr1 24987812 . G . PASS END=24987884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1350:0,90,255:40,0 chr1 24987885 . C . PASS END=24987887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:21,0 chr1 24989151 . A . PASS END=24989153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:24,0 chr1 24989154 . C . PASS END=24989154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 24989155 . T . PASS END=24989157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,914:0,72,255:26,0 chr1 24989158 . C . PASS END=24989295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,873:0,81,255:40,0 chr1 24989674 . G . PASS END=24989715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,120,1800:0,136,255:40,0 chr1 24993306 . T . PASS END=24993310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 24993311 . G . PASS END=24993333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:18,0 chr1 24993334 . C . PASS END=24993363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:25,0 chr1 24993364 . C . PASS END=24993364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 24993365 . C . PASS END=24993366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:24,0 chr1 24993367 . G . PASS END=24993367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 24993368 . C . PASS END=24993408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,860:0,61,255:26,0 chr1 24993409 . C . PASS END=24993409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 24993410 . G . PASS END=24993416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 24995614 . G . PASS END=24995619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 24995620 . T . PASS END=24995620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 24995621 . T . PASS END=24995627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:9,0 chr1 24995628 . C . PASS END=24995636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 24995637 . G . PASS END=24995637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 24995638 . G . PASS END=24995646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 24995647 . T . PASS END=24995647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 24995648 . T . PASS END=24995648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr1 24995649 . C . PASS END=24995649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 24995650 . T . PASS END=24995650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 24995651 . C . PASS END=24995666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:19,0 chr1 24995667 . C . PASS END=24995667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 24995668 . T . PASS END=24995668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 24995669 . C . PASS END=24995669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 24995670 . C . PASS END=24995670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 24995671 . A . PASS END=24995675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 24995676 . A . PASS END=24995676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 24995677 . G . PASS END=24995681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 24995682 . G . PASS END=24995682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 24995683 . A . PASS END=24995687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,789:0,61,255:24,0 chr1 24995688 . C . PASS END=24995688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:23,0 chr1 24995689 . T . PASS END=24995693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 24995694 . C . PASS END=24995694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:25,0 chr1 24995695 . T . PASS END=24995696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 24995697 . C . PASS END=24995697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr1 24995698 . A . PASS END=24995724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,773:0,61,255:26,0 chr1 24995725 . T . PASS END=24995725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 24995726 . C . PASS END=24995728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 24995729 . C . PASS END=24995729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 24995730 . C . PASS END=24995744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,806:0,77,255:26,0 chr1 24995745 . G . PASS END=24995749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 24995750 . T . PASS END=24995756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 24995757 . C . PASS END=24995768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr1 24995769 . A . PASS END=24995769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr1 24995770 . G . PASS END=24995771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 24995772 . G . PASS END=24995772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 24995773 . G . PASS END=24995774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24995775 . G . PASS END=24995778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 24995779 . C . PASS END=24995785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr1 24995786 . T . PASS END=24995786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1005:0,46,255:29,0 chr1 24995787 . C . PASS END=24995789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 24995790 . C . PASS END=24995801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1109:0,93,255:31,0 chr1 24995802 . A . PASS END=24995802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 24995803 . A . PASS END=24995808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1107:0,80,255:32,0 chr1 24995809 . C . PASS END=24995810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 24995811 . C . PASS END=24995811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 24995812 . C . PASS END=24995812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 24995813 . C . PASS END=24995816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 24995817 . T . PASS END=24995817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:28,0 chr1 24995818 . C . PASS END=24995823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1133:0,80,255:29,0 chr1 24995824 . G . PASS END=24995824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 24995825 . A . PASS END=24995826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 24995827 . A . PASS END=24995827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,721:0,4,255:22,0 chr1 24995828 . C . PASS END=24995833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,956:0,70,255:26,0 chr1 24995834 . C . PASS END=24995834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24995835 . C . PASS END=24995843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 24995844 . C . PASS END=24995847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 24995848 . C . PASS END=24995850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 24995851 . G . PASS END=24995851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24995852 . C . PASS END=24995852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 24995853 . A . PASS END=24995856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24995857 . G . PASS END=24995857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 24995858 . A . PASS END=24995859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 24995860 . A . PASS END=24995860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 24995861 . G . PASS END=24995861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 24995862 . G . PASS END=24995864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 24995865 . C . PASS END=24995866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 24995867 . T . PASS END=24995868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24995869 . C . PASS END=24995872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1031:0,74,255:26,0 chr1 24995873 . A . PASS END=24995873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 24995874 . G . PASS END=24995874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 24995875 . C . PASS END=24995877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 24995878 . C . PASS END=24995879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 24995880 . C . PASS END=24995880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 24995881 . T . PASS END=24995881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 24995882 . A . PASS END=24996004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1103:0,82,255:38,0 chr1 24996005 . A . PASS END=24996005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:29,0 chr1 24996006 . G . PASS END=24996016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr1 24996017 . T . PASS END=24996031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 24996032 . C . PASS END=24996043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:17,0 chr1 24996044 . G . PASS END=24996059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 24996060 . A . PASS END=24996064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 24996065 . A . PASS END=24996065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr1 24996066 . A . PASS END=24996078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,304:0,24,255:9,0 chr1 24996611 . G . PASS END=24996644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 24996645 . G . PASS END=24996662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 24996663 . G . PASS END=24996668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 24996669 . G . PASS END=24996672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 24996673 . C . PASS END=24996697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,613:0,41,255:19,0 chr1 24996698 . C . PASS END=24996701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 24996702 . G . PASS END=24996715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 24996716 . C . PASS END=24996722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 24996723 . T . PASS END=24996723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:21,0 chr1 24996724 . C . PASS END=24996729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 24996730 . C . PASS END=24996730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 24996731 . A . PASS END=24996731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 24996732 . C . PASS END=24996754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:18,0 chr1 24996755 . T . PASS END=24996755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 24996756 . G . PASS END=24996764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:16,0 chr1 24996765 . A . PASS END=24996766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,454:0,31,255:15,0 chr1 24996767 . A . PASS END=24996774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 24996775 . A . PASS END=24996775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 24996776 . A . PASS END=24996796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr1 24996797 . A . PASS END=24996804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 24996805 . G . PASS END=24996806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:14:0,21,315:0,42,255:7,0 chr1 24997877 . A . PASS END=24997902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:57:0,120,1800:0,154,255:40,0 chr1 24997903 . G . PASS END=24998049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:90:43:0,90,1350:0,113,255:40,0 chr1 24998050 . A . PASS END=24998081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,817:0,63,255:24,0 chr1 24998082 . A . PASS END=24998082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 24998083 . G . PASS END=24998086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:23,0 chr1 24998673 . G . PASS END=24998777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:93:43:0,93,1395:0,102,255:40,0 chr1 25072045 . A . PASS END=25072048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:25,0 chr1 25072049 . C . PASS END=25072067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr1 25072068 . T . PASS END=25072079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr1 25072080 . G . PASS END=25072089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 25072090 . G . PASS END=25072093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 25072094 . C . PASS END=25072111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,47,255:17,0 chr1 25072112 . T . PASS END=25072112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 25072113 . C . PASS END=25072113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 25072114 . A . PASS END=25072116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 25124233 . G . PASS END=25124342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,108,1620:0,129,255:40,0 chr1 25140585 . G . PASS END=25140592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1380:0,108,255:36,0 chr1 25140593 . C . PASS END=25140593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr1 25140594 . A . PASS END=25140688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:37:0,85,1407:0,85,255:40,2 chr1 25140689 . A . PASS END=25140689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:40:42:0,40,1418:0,40,255:36,2 chr1 25140690 . A . PASS END=25140710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:38:0,81,1215:0,85,255:37,0 chr1 25153501 . G . PASS END=25153607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,117,1755:0,126,255:40,0 chr1 25166351 . C . PASS END=25166531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:30:0,90,1094:0,90,255:40,0 chr1 25166532 . G . PASS END=25166532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr1 25167264 . G . PASS END=25167428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:38:0,96,1440:0,96,255:40,0 chr1 25228613 . T . PASS END=25228625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,426:0,33,255:13,0 chr1 25228626 . C . PASS END=25228644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:19,0 chr1 25228645 . G . PASS END=25228665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 25228666 . T . PASS END=25228675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 25228676 . G . PASS END=25228717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 25228718 . C . PASS END=25228726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:21:0,52,784:0,52,255:19,0 chr1 25228727 . G . PASS END=25228733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 25228734 . A . PASS END=25228739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 25228740 . C . PASS END=25228758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 25228759 . C . PASS END=25228778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,611:0,40,255:19,0 chr1 25228779 . A . PASS END=25228779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr1 25228780 . G . PASS END=25228786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:15,0 chr1 25228787 . G . PASS END=25228787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:14,0 chr1 25228788 . G . PASS END=25228788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:14,0 chr1 25228789 . T . PASS END=25228789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 25228790 . A . PASS END=25228790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 25228791 . G . PASS END=25228791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 25228792 . G . PASS END=25228793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:16,0 chr1 25228794 . G . PASS END=25228794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 25228795 . A . PASS END=25228795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 25228796 . G . PASS END=25228796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 25228797 . C . PASS END=25228799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 25228800 . T . PASS END=25228800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 25228801 . C . PASS END=25228801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 25228802 . G . PASS END=25228803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 25228804 . C . PASS END=25228804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 25228805 . C . PASS END=25228805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 25228806 . C . PASS END=25228812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 25228813 . T . PASS END=25228814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr1 25228815 . C . PASS END=25228816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:15,0 chr1 25228817 . G . PASS END=25228817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 25228818 . C . PASS END=25228826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 25228827 . A . PASS END=25228828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 25228829 . G . PASS END=25228833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 25228834 . A . PASS END=25228834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 25228835 . C . PASS END=25228840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 25228841 . G . PASS END=25228841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 25228842 . G . PASS END=25228850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 25228851 . G . PASS END=25228852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 25228853 . T . PASS END=25228854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25228855 . T . PASS END=25228860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 25228861 . A . PASS END=25228861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 25228862 . G . PASS END=25228865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25228866 . A . PASS END=25228866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,457:0,11,255:10,0 chr1 25228867 . G . PASS END=25228884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,435:0,36,255:12,0 chr1 25228885 . T . PASS END=25228890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 25228891 . G . PASS END=25228891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 25228892 . G . PASS END=25228892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 25228893 . A . PASS END=25228914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 25228915 . G . PASS END=25228915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 25228916 . G . PASS END=25228921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 25228922 . C . PASS END=25228922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 25228923 . G . PASS END=25228925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 25228926 . T . PASS END=25228931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:12:0,22,404:0,22,255:10,0 chr1 25228932 . G . PASS END=25228935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 25228936 . G . PASS END=25228936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 25228937 . G . PASS END=25228943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 25228944 . G . PASS END=25228944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 25228945 . T . PASS END=25228948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,349:0,27,255:9,0 chr1 25228949 . G . PASS END=25228975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:12,0 chr1 25228976 . C . PASS END=25228976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25228977 . G . PASS END=25228994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:12,0 chr1 25228995 . A . PASS END=25228995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25228996 . T . PASS END=25228997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 25228998 . C . PASS END=25228998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25228999 . T . PASS END=25228999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 25229000 . C . PASS END=25229000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25229001 . G . PASS END=25229005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 25229006 . C . PASS END=25229006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 25229007 . G . PASS END=25229010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 25229011 . G . PASS END=25229011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 25229012 . C . PASS END=25229014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 25229015 . G . PASS END=25229015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 25229016 . G . PASS END=25229029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 25229030 . G . PASS END=25229030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25229031 . G . PASS END=25229032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 25229033 . A . PASS END=25229034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25229035 . C . PASS END=25229040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 25229041 . T . PASS END=25229043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 25229044 . C . PASS END=25229044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 25229045 . C . PASS END=25229046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 25229047 . C . PASS END=25229054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:10,0 chr1 25229055 . T . PASS END=25229072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 25229073 . A . PASS END=25229073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 25229074 . A . PASS END=25229080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 25229081 . C . PASS END=25229082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 25229083 . C . PASS END=25229091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 25229092 . T . PASS END=25229095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 25229096 . C . PASS END=25229149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 25229150 . C . PASS END=25229157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 25233750 . C . PASS END=25233756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,589:0,51,255:18,0 chr1 25233757 . T . PASS END=25233757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 25233758 . G . PASS END=25233767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 25233768 . G . PASS END=25233768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:17,0 chr1 25233769 . C . PASS END=25233782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,653:0,43,255:19,0 chr1 25233783 . G . PASS END=25233802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,752:0,63,255:26,0 chr1 25233803 . C . PASS END=25233803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 25233804 . C . PASS END=25233804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 25233805 . T . PASS END=25233813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 25233814 . G . PASS END=25233824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:30,0 chr1 25233825 . G . PASS END=25233825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 25233826 . T . PASS END=25233842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 25233843 . G . PASS END=25233843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 25233844 . C . PASS END=25233846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 25233847 . T . PASS END=25233848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 25233849 . C . PASS END=25233853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 25233854 . T . PASS END=25233864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 25233865 . G . PASS END=25233871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 25233872 . A . PASS END=25233907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr1 25233908 . C . PASS END=25233908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 25245731 . G . PASS END=25245738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:18,0 chr1 25245739 . T . PASS END=25245739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 25245740 . C . PASS END=25245744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 25245745 . G . PASS END=25245745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 25245746 . G . PASS END=25245746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 25245747 . T . PASS END=25245748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 25245749 . C . PASS END=25245749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:19,0 chr1 25245750 . G . PASS END=25245751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 25245752 . C . PASS END=25245752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:21,0 chr1 25245753 . C . PASS END=25245754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 25245755 . C . PASS END=25245756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 25245757 . G . PASS END=25245759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 25245760 . A . PASS END=25245760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 25245761 . C . PASS END=25245771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 25245772 . C . PASS END=25245772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 25245773 . G . PASS END=25245786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 25245787 . A . PASS END=25245787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 25245788 . C . PASS END=25245804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 25245805 . A . PASS END=25245805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 25245806 . A . PASS END=25245806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 25245807 . C . PASS END=25245835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,684:0,57,255:19,0 chr1 25253175 . T . PASS END=25253182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,119,1681:0,119,255:40,0 chr1 25254065 . C . PASS END=25254066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 25254067 . C . PASS END=25254067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 25254068 . G . PASS END=25254072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:23,0 chr1 25254073 . C . PASS END=25254073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 25254074 . T . PASS END=25254074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 25254075 . G . PASS END=25254075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 25254076 . C . PASS END=25254076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 25254077 . G . PASS END=25254077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 25254078 . G . PASS END=25254079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 25254080 . C . PASS END=25254080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 25254081 . C . PASS END=25254086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,829:0,69,255:23,0 chr1 25254087 . G . PASS END=25254087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 25254088 . C . PASS END=25254098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,897:0,62,255:25,0 chr1 25254099 . G . PASS END=25254102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 25254103 . C . PASS END=25254103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:27,0 chr1 25254104 . T . PASS END=25254181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1094:0,80,255:36,0 chr1 25254182 . T . PASS END=25254211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,612:0,65,255:25,0 chr1 25254212 . A . PASS END=25254212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr1 25254213 . T . PASS END=25254217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 25254218 . C . PASS END=25254221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 25256078 . C . PASS END=25256083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 25256084 . G . PASS END=25256109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 25256110 . G . PASS END=25256112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 25256113 . A . PASS END=25256119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 25256120 . G . PASS END=25256120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25256121 . G . PASS END=25256121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 25256122 . G . PASS END=25256124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 25256125 . G . PASS END=25256125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr1 25256126 . C . PASS END=25256141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,550:0,45,255:15,0 chr1 25256142 . T . PASS END=25256142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 25256143 . T . PASS END=25256147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 25256148 . C . PASS END=25256148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 25256149 . T . PASS END=25256159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 25256160 . A . PASS END=25256161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 25256162 . G . PASS END=25256162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 25256163 . A . PASS END=25256166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 25256167 . C . PASS END=25256167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 25256168 . G . PASS END=25256171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,413:0,39,255:13,0 chr1 25256172 . G . PASS END=25256172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 25256173 . C . PASS END=25256205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,451:0,36,255:13,0 chr1 25256206 . C . PASS END=25256206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 25256207 . C . PASS END=25256214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 25256215 . G . PASS END=25256219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 25256220 . C . PASS END=25256243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,365:0,30,255:13,0 chr1 25256244 . T . PASS END=25256259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 25256260 . C . PASS END=25256260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 25256261 . G . PASS END=25256261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 25256262 . C . PASS END=25256262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 25256263 . T . PASS END=25256274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,22,255:9,0 chr1 25256275 . T . PASS END=25256275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 25256276 . C . PASS END=25256295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 25256296 . A . PASS END=25256296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 25256297 . G . PASS END=25256304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 25256305 . C . PASS END=25256306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 25256307 . G . PASS END=25256316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 25256317 . G . PASS END=25256317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 25256318 . T . PASS END=25256319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 25256320 . T . PASS END=25256320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 25256321 . G . PASS END=25256321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 25256322 . A . PASS END=25256343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 25256344 . C . PASS END=25256355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 25256356 . G . PASS END=25256356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr1 25256357 . C . PASS END=25256358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:7,0 chr1 25256359 . T . PASS END=25256359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 25291005 . C . PASS END=25291009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,862:0,69,255:25,0 chr1 25291010 . A T, 46.70 PASS DP=25;MQ=249.12;MQRankSum=3.995;ReadPosRankSum=3.280;FractionInformativeReads=0.960;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:10,3,0:5,6,0:46:81,0,50,322,536,858:255,0,255:15,0:4.6704e+01,1.1442e-04,5.3000e+01,3.2188e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,4,6,3:8,7,2,7 chr1 25291011 . T . PASS END=25291011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:24,0 chr1 25291012 . G . PASS END=25291012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 25291013 . A . PASS END=25291013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 25291014 . A . PASS END=25291018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr1 25291019 . G . PASS END=25291019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr1 25291020 . G . PASS END=25291027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:26,0 chr1 25291028 . G . PASS END=25291028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 25291029 . T . PASS END=25291047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,854:0,61,255:26,0 chr1 25291048 . G . PASS END=25291048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 25291049 . C . PASS END=25291049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 25291050 . T . PASS END=25291050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 25291051 . G . PASS END=25291051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 25291052 . T . PASS END=25291062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 25549757 . T . PASS END=25549774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:45:0,91,1386:0,91,255:40,0 chr1 25549775 . T . PASS END=25549922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:35:0,92,1256:0,92,255:40,0 chr1 25551493 . T . PASS END=25551591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:38:0,84,1287:0,84,255:40,0 chr1 25553933 . T . PASS END=25554023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:44:0,85,1430:0,85,255:40,0 chr1 25554609 . C . PASS END=25554723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,93,255:40,0 chr1 25554724 . T . PASS END=25554726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 25555489 . C . PASS END=25555614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,111,1665:0,129,255:40,0 chr1 25558595 . C . PASS END=25558617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,886:0,69,255:25,0 chr1 25558618 . A . PASS END=25558619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:24,0 chr1 25558620 . T . PASS END=25558659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:25,0 chr1 25558660 . C . PASS END=25558660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 25558661 . C . PASS END=25558666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 25558667 . A . PASS END=25558688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:16:0,41,659:0,41,255:19,0 chr1 25558689 . C . PASS END=25558702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,435:0,36,255:12,0 chr1 25558935 . C . PASS END=25558958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:38:0,82,1413:0,82,255:39,0 chr1 25569080 . T . PASS END=25569086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:25,0 chr1 25569087 . G . PASS END=25569196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:35:0,89,1270:0,89,255:40,0 chr1 25570041 . A . PASS END=25570124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1156:0,85,255:40,0 chr1 25570707 . T . PASS END=25570715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1344:0,98,255:37,0 chr1 25570981 . T . PASS END=25570989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,168,255:40,0 chr1 25571584 . T . PASS END=25571751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:89:35:0,89,1197:0,89,255:40,0 chr1 25571752 . C . PASS END=25571766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1235:0,88,255:34,0 chr1 25571767 . T . PASS END=25571775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,945:0,63,255:25,0 chr1 25571776 . T . PASS END=25571776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1025:0,54,255:21,0 chr1 25571777 . A . PASS END=25571777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr1 25571778 . A . PASS END=25571792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:21:0,48,720:0,49,255:18,0 chr1 25572935 . C . PASS END=25572944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,690:0,57,255:19,0 chr1 25572945 . T . PASS END=25572986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:26,0 chr1 25572987 . G . PASS END=25573008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1196:0,87,255:32,0 chr1 25573009 . T . PASS END=25573053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 25573054 . G . PASS END=25573054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 25573055 . C . PASS END=25573056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 25573057 . A . PASS END=25573057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 25573058 . T . PASS END=25573076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 25573077 . G . PASS END=25573077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 25573078 . T . PASS END=25573096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 25573097 . G . PASS END=25573101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 25573102 . C . PASS END=25573117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 25573118 . A . PASS END=25573171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,570:0,41,255:19,0 chr1 25573172 . C . PASS END=25573210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 25573211 . A . PASS END=25573211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 25573212 . G . PASS END=25573229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 25573230 . C . PASS END=25573230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 25573231 . C . PASS END=25573233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 25573234 . T . PASS END=25573234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 25573235 . A . PASS END=25573235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 25573236 . C . PASS END=25573236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 25573237 . T . PASS END=25573240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 25573241 . G . PASS END=25573250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,774:0,50,255:19,0 chr1 25573251 . C . PASS END=25573251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 25573252 . C . PASS END=25573252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 25573253 . T . PASS END=25573255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 25573256 . G . PASS END=25573263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 25573264 . G . PASS END=25573274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,65,255:21,0 chr1 25573275 . G . PASS END=25573275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:16,0 chr1 25573276 . C . PASS END=25573308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:18,0 chr1 25573309 . A . PASS END=25573309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:16,0 chr1 25573310 . C . PASS END=25573329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,44,255:19,0 chr1 25573330 . C . PASS END=25573345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 25573346 . G . PASS END=25573401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:18,0 chr1 25573402 . G . PASS END=25573454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,35,255:13,0 chr1 25599039 . A . PASS END=25599182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:36:0,81,1215:0,94,255:40,0 chr1 25599183 . C . PASS END=25599186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:34:0,72,1080:0,102,255:26,0 chr1 25611064 . T . PASS END=25611072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,224,255:40,0 chr1 25611073 . A . PASS END=25611250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:70:0,120,1800:0,180,255:40,0 chr1 25617132 . T . PASS END=25617282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:55:0,120,1800:0,147,255:40,0 chr1 25627437 . A . PASS END=25627584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:83:37:0,83,1396:0,83,255:40,0 chr1 25628011 . G . PASS END=25628011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 25628012 . C . PASS END=25628012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:28,0 chr1 25628013 . G . PASS END=25628016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 25628017 . T . PASS END=25628017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1031:0,46,255:28,0 chr1 25628018 . C . PASS END=25628177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1105:0,80,255:40,0 chr1 25629813 . A . PASS END=25629950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:33:0,93,1395:0,99,255:40,0 chr1 25633087 . G . PASS END=25633220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:38:0,109,1413:0,109,255:40,0 chr1 25634138 . G . PASS END=25634342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:59:0,120,1800:0,161,255:40,0 chr1 25643491 . G . PASS END=25643495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 25643496 . G . LowGQ END=25643496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 25643497 . C . PASS END=25643515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 25643516 . A . PASS END=25643539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 25643540 . G . LowGQ END=25643540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 25643541 . T . PASS END=25643542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 25643543 . A . LowGQ END=25643552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,45:0,0,88:2,0 chr1 25643553 . T C, 20.67 PASS DP=3;MQ=11.79;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:6:57,9,0,87,9,87:125,12,0:0,0:2.0670e+01,6.6696e+00,1.1010e+00,8.4850e+01,4.1440e+01,8.7850e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,2:0,0,1,2 chr1 25643554 . G . LowDepth;LowGQ END=25643570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:0:1:0,0,16:0,0,16:1,0 chr1 25648380 . G . PASS END=25648453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:67:0,120,1800:0,156,255:40,0 chr1 25655389 . T . PASS END=25655621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,3:74:96:33:0,96,1266:0,99,255:40,0 chr1 25655622 . C . PASS END=25655622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1458:0,74,255:32,0 chr1 25655623 . A . PASS END=25655627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,104,255:33,0 chr1 25666978 . A . PASS END=25667070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:37:0,102,1398:0,111,255:40,0 chr1 25669452 . T . PASS END=25669564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:90:38:0,90,1350:0,99,255:40,0 chr1 25678117 . G . PASS END=25678184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,131,255:40,0 chr1 25679373 . G . PASS END=25679465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,144,255:40,0 chr1 25683284 . A . PASS END=25683344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:57:0,120,1800:0,170,255:40,0 chr1 25687151 . A . PASS END=25687196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:63:0,120,1800:0,162,255:40,0 chr1 25688927 . T . PASS END=25689044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:38:0,93,1395:0,108,255:40,0 chr1 25696958 . C . PASS END=25697031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,132,255:40,1 chr1 25701840 . C . PASS END=25701919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:159,0:159:99:134:0,120,1800:0,255,255:40,0 chr1 25711080 . T . PASS END=25711156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:98:0,120,1800:0,255,255:40,0 chr1 25711157 . C . PASS END=25711193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:92:0,120,1800:0,243,255:40,0 chr1 25711194 . G A, 43.32 PASS DP=91;MQ=84.02;MQRankSum=0.590;ReadPosRankSum=4.584;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,37,0:0.411,0.000:90:28,16,0:25,21,0:42:78,0,46,1313,1814,3127:255,0,255:40,0:4.3319e+01,2.6223e-04,4.8600e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,28,13,24:26,27,18,19 chr1 25711195 . C . PASS END=25711231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,193,255:40,0 chr1 25711232 . G . PASS END=25711284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,105,1575:0,134,255:40,0 chr1 25712202 . A . PASS END=25712203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 25712204 . G . PASS END=25712335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,994:0,81,255:40,0 chr1 25715467 . C . PASS END=25715591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:81:48:0,81,1215:0,140,255:40,0 chr1 25715592 . T . PASS END=25715603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:29:0,75,1125:0,87,255:26,0 chr1 25715604 . T . PASS END=25715604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 25717240 . C . PASS END=25717250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,878:0,69,255:24,0 chr1 25717251 . T . PASS END=25717254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 25717255 . T . PASS END=25717258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 25717259 . G . PASS END=25717264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 25717265 . G . PASS END=25717265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 25717266 . C . PASS END=25717270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:32,0 chr1 25717271 . G . PASS END=25717307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1194:0,81,255:38,0 chr1 25717308 . G C, 45.80 PASS DP=40;MQ=108.68;MQRankSum=-3.584;ReadPosRankSum=2.873;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:9,10,0:8,13,0:44:81,0,47,786,600,1386:255,0,255:16,0:4.5800e+01,1.5713e-04,5.0055e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,10,13:7,10,17,6 chr1 25717309 . A . PASS END=25717345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1356:0,87,255:39,0 chr1 25717346 . A . PASS END=25717399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1177:0,83,255:37,0 chr1 25717400 . A . PASS END=25717401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1108:0,77,255:26,0 chr1 25717402 . G . PASS END=25717406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 25718485 . C . PASS END=25718493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1243:0,102,255:35,0 chr1 25718494 . C . PASS END=25718610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1260:0,83,255:40,0 chr1 25718611 . T . PASS END=25718618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 25718619 . A . PASS END=25718619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:19,0 chr1 25718620 . T . PASS END=25718625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,969:0,65,255:22,0 chr1 25718626 . A . PASS END=25718626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:20,0 chr1 25718627 . G . PASS END=25718632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:25,0 chr1 25729087 . G . PASS END=25729236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:96:39:0,96,1280:0,98,255:40,0 chr1 25729237 . A . PASS END=25729237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1280:0,70,255:29,0 chr1 25735174 . C . PASS END=25735179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 25735180 . A . PASS END=25735180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 25735181 . G . PASS END=25735184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 25735185 . G . PASS END=25735195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 25735196 . T . PASS END=25735196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 25735197 . C . PASS END=25735255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:28:0,84,1003:0,84,255:39,2 chr1 25735256 . C . PASS END=25735256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1465:0,57,255:40,2 chr1 25735257 . C . PASS END=25735340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1195:0,85,255:40,0 chr1 25735341 . C . PASS END=25735360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,853:0,66,255:26,0 chr1 25737831 . C . PASS END=25737930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:33:0,93,1395:0,99,255:40,0 chr1 25746246 . C . PASS END=25746246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 25746247 . T . PASS END=25746247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 25746248 . T . LowGQ END=25746249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:10:0,0,258:0,0,255:10,0 chr1 25746250 . T . PASS END=25746250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 25746251 . G . PASS END=25746251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,372:0,33,255:11,0 chr1 25746252 . G . PASS END=25746252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 25746253 . T . PASS END=25746257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,411:0,36,255:12,0 chr1 25746258 . G . PASS END=25746259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,294:0,3,255:9,0 chr1 25746260 . T . PASS END=25746260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 25746261 . T . PASS END=25746262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 25746263 . A . PASS END=25746264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 25746265 . A . PASS END=25746265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 25746266 . G . PASS END=25746266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 25746267 . A . PASS END=25746267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 25746268 . C . PASS END=25746269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,336:0,33,255:11,0 chr1 25746270 . G . PASS END=25746270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 25746271 . C . LowGQ END=25746271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,278:0,0,255:9,0 chr1 25746272 . A . PASS END=25746273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 25747130 . C . PASS END=25747130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 25747131 . T . PASS END=25747134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 25747135 . T . PASS END=25747136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 25747137 . G . PASS END=25747139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 25747140 . T . PASS END=25747140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:26,0 chr1 25747141 . G . PASS END=25747144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 25747145 . C . PASS END=25747145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 25747146 . G . PASS END=25747161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1041:0,84,255:30,0 chr1 25747162 . T . PASS END=25747162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 25747163 . C . PASS END=25747171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:34,0 chr1 25747172 . C . PASS END=25747172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:32,0 chr1 25747173 . G . PASS END=25747175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:34,0 chr1 25747176 . A . PASS END=25747176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:33,0 chr1 25747177 . T . PASS END=25747177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1280:0,102,255:34,0 chr1 25747178 . A . PASS END=25747178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1011:0,52,255:31,0 chr1 25747179 . G . PASS END=25747189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1174:0,85,255:35,0 chr1 25747190 . A . PASS END=25747190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1084:0,55,255:30,0 chr1 25747191 . A . PASS END=25747192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr1 25747193 . A . PASS END=25747204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 25747205 . T . PASS END=25747205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:29,0 chr1 25747206 . G . PASS END=25747207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 25747208 . G . PASS END=25747208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,881:0,59,255:28,0 chr1 25747209 . A . PASS END=25747211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 25747212 . T . PASS END=25747213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1005:0,66,255:28,0 chr1 25747214 . C . PASS END=25747214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 25747215 . T . PASS END=25747215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:27,0 chr1 25747216 . T . PASS END=25747218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 25747219 . A . PASS END=25747219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:27,0 chr1 25747220 . G . PASS END=25747229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1180:0,83,255:29,0 chr1 25747230 . G C, 0.32 DRAGENSnpHardQUAL DP=30;MQ=42.30;MQRankSum=-3.759;ReadPosRankSum=1.841;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:24,6,0:0.200,0.000:30:13,4,0:11,2,0:11:24,0,43,215,850,1065:142,0,255:23,0:3.2404e-01,1.1433e+01,5.7808e+01,2.2606e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,16,2,4:9,15,4,2 chr1 25747231 . C . PASS END=25747231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 25747232 . A . PASS END=25747241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 25747242 . G . PASS END=25747253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,67,255:23,0 chr1 25747254 . A . PASS END=25747254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:22,0 chr1 25747255 . G . PASS END=25747267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 25747268 . T . PASS END=25747277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr1 25756431 . C . PASS END=25756463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1173:0,91,255:36,0 chr1 25756464 . A . PASS END=25756464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1078:0,52,255:29,0 chr1 25756465 . T . PASS END=25756470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1095:0,82,255:30,0 chr1 25756471 . C . PASS END=25756471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 25756472 . G . PASS END=25756474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 25756475 . G . PASS END=25756475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 25756476 . C . PASS END=25756479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 25756480 . A . PASS END=25756480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 25756481 . A . PASS END=25756483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 25756484 . G . PASS END=25756514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 25756515 . G . PASS END=25756515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 25756516 . C . PASS END=25756520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 25756521 . A . PASS END=25756521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 25756522 . C . PASS END=25756530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 25756531 . C . PASS END=25756535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,46,255:18,0 chr1 25756536 . T . PASS END=25756539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:22:0,36,540:0,66,255:13,0 chr1 25756540 . G . PASS END=25756541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr1 25756542 . T . PASS END=25756542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:14,0 chr1 25756543 . C . PASS END=25756557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,635:0,40,255:19,0 chr1 25756558 . C . PASS END=25756560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 25756561 . G . PASS END=25756607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,585:0,43,255:19,0 chr1 25756608 . C . PASS END=25756611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 25756612 . C . PASS END=25756629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:14,0 chr1 25756630 . G . PASS END=25756630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 25756631 . C . PASS END=25756632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 25756633 . C . PASS END=25756653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:10:0,30,349:0,30,255:12,0 chr1 25756654 . G . PASS END=25756654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 25756655 . G . PASS END=25756669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 25756670 . C . PASS END=25756677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 25756678 . G . PASS END=25756678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 25756679 . G . PASS END=25756680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 25756681 . C . PASS END=25756681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 25756682 . A . PASS END=25756683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:8,0 chr1 25757590 . A . PASS END=25757592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 25757593 . A . PASS END=25757593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 25757594 . A . PASS END=25757597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 25757598 . G . PASS END=25757598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 25757599 . C . PASS END=25757604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr1 25757605 . G . PASS END=25757605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 25757606 . C . PASS END=25757606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 25757607 . C . PASS END=25757610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 25757611 . T . PASS END=25757611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 25757612 . G . PASS END=25757613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 25757614 . A . PASS END=25757614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 25757615 . G . PASS END=25757618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 25757619 . G . PASS END=25757619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 25757620 . C . PASS END=25757620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 25757621 . T . PASS END=25757631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 25757632 . C . PASS END=25757632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25757633 . T . PASS END=25757634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 25757635 . A . PASS END=25757635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25757636 . A . PASS END=25757636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:13,0 chr1 25757637 . G . PASS END=25757637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 25757638 . C . PASS END=25757640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 25757641 . A . PASS END=25757641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 25757642 . A . PASS END=25757642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25757643 . C . PASS END=25757643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 25757644 . C . PASS END=25757646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25757647 . A . PASS END=25757647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 25757648 . T . PASS END=25757653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 25757654 . A . PASS END=25757654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 25757655 . G . PASS END=25757659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25757660 . T . PASS END=25757661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,383:0,28,255:13,0 chr1 25757662 . T . PASS END=25757662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 25757663 . A . PASS END=25757667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 25757668 . A . PASS END=25757669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 25773253 . T . PASS END=25773383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:41:0,90,1410:0,90,255:40,0 chr1 25773384 . A . PASS END=25773384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1457:0,79,255:35,0 chr1 25773385 . C . PASS END=25773394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:38:0,93,1395:0,114,255:37,0 chr1 25775299 . G . PASS END=25775309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1034:0,93,255:31,0 chr1 25775310 . A . PASS END=25775310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:31,2 chr1 25775311 . T . PASS END=25775311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1108:0,30,255:28,2 chr1 25775312 . T . PASS END=25775312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:29,0 chr1 25775313 . T . PASS END=25775373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1227:0,91,255:39,0 chr1 25775374 . C . PASS END=25775375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1167:0,58,255:37,1 chr1 25775376 . T . PASS END=25775382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:37,0 chr1 25775383 . G . PASS END=25775383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1166:0,53,255:34,0 chr1 25775384 . C . PASS END=25775394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1329:0,100,255:38,0 chr1 25775395 . T . PASS END=25775395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1225:0,67,255:30,0 chr1 25775396 . A . PASS END=25775396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:39:0,93,1395:0,101,255:31,0 chr1 25775397 . T . PASS END=25775397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1235:0,67,255:28,0 chr1 25775398 . G . PASS END=25775406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,91,255:31,0 chr1 25775407 . C . PASS END=25775407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1021:0,68,255:26,0 chr1 25775408 . A . PASS END=25775408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 25775409 . G . PASS END=25775409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,967:0,19,255:24,0 chr1 25775410 . T . PASS END=25775411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,85,255:28,0 chr1 25775412 . C . PASS END=25775412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1005:0,68,255:26,0 chr1 25775413 . G . PASS END=25775413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,976:0,32,255:25,0 chr1 25775414 . T . PASS END=25775418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:30,0 chr1 25775419 . C . PASS END=25775419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:27,0 chr1 25775420 . A . PASS END=25775422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 25775423 . C . PASS END=25775424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 25775425 . G . PASS END=25775425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,881:0,24,255:22,0 chr1 25780750 . A . PASS END=25780845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:51:0,120,1800:0,125,255:40,0 chr1 25780846 . A . PASS END=25780873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:71:0,120,1800:0,197,255:40,0 chr1 25783144 . T . PASS END=25783318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:34:0,81,1215:0,96,255:40,0 chr1 25783319 . G . PASS END=25783322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:31:0,75,1125:0,93,255:26,0 chr1 25784882 . C . PASS END=25785375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:35:0,87,1305:0,87,255:40,0 chr1 25785376 . C . PASS END=25785379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 25785380 . T . PASS END=25785383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:30:0,54,810:0,90,255:18,0 chr1 25810607 . G . PASS END=25810623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1227:0,88,255:35,0 chr1 25810624 . A . PASS END=25810624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr1 25810625 . A . PASS END=25810638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:36:0,81,1193:0,81,255:38,0 chr1 25810639 . A . PASS END=25810639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1260:0,75,255:37,0 chr1 25810640 . C . PASS END=25810749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:37:0,81,1352:0,81,255:40,0 chr1 25810750 . A . PASS END=25810750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:31,0 chr1 25810751 . G . PASS END=25810764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:32,0 chr1 25810765 . A . PASS END=25810765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 25812104 . G . PASS END=25812280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:81:31:0,81,1215:0,93,255:40,0 chr1 25812281 . A . PASS END=25812286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:36:0,63,945:0,108,255:25,0 chr1 25815664 . G . PASS END=25815784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,137,255:40,0 chr1 25817837 . G . PASS END=25817848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,174,255:40,0 chr1 25817901 . G . PASS END=25818035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,98,255:40,0 chr1 25818036 . G . PASS END=25818054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 25818055 . G . PASS END=25818055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 25818056 . G . PASS END=25818067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,853:0,69,255:23,0 chr1 25818068 . T . PASS END=25818068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 25818069 . G . PASS END=25818071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 25818072 . C . PASS END=25818075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:18,0 chr1 25824755 . G . PASS END=25824774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,895:0,78,255:26,0 chr1 25824775 . C . PASS END=25824827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,938:0,81,255:33,0 chr1 25824828 . C . PASS END=25824828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 25824829 . A . PASS END=25824831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 25824832 . A . PASS END=25824841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:30:0,63,945:0,90,255:25,0 chr1 25824842 . G . PASS END=25824872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,675:0,43,255:19,0 chr1 25824873 . C . PASS END=25824873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:15,0 chr1 25824874 . C . PASS END=25824877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:17,0 chr1 25824878 . A . LowGQ END=25824878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,518:15,0,255:14,0 chr1 25824879 . C . PASS END=25824897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,630:0,41,255:16,0 chr1 25824898 . G . PASS END=25824898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 25824899 . A . PASS END=25824900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 25824901 . A . PASS END=25824902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 25824903 . C . PASS END=25824903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:13,0 chr1 25824904 . A . PASS END=25824904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 25824905 . G . PASS END=25824906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:12,0 chr1 25824907 . C . PASS END=25824907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 25824908 . C . PASS END=25824908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:12,0 chr1 25824909 . C . PASS END=25824909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 25824910 . T . PASS END=25824910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:11,0 chr1 25824911 . C . PASS END=25824911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:11,0 chr1 25824912 . T . PASS END=25824912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:11,0 chr1 25824913 . G . PASS END=25824915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 25824916 . C . PASS END=25824921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:26:12:0,26,405:0,26,255:9,0 chr1 25824922 . C . PASS END=25824924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 25824925 . A . PASS END=25824940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,311:0,27,255:9,0 chr1 25824941 . A . PASS END=25824941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 25824942 . G . PASS END=25824943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 25824944 . C . PASS END=25824944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:7,0 chr1 25824945 . C . PASS END=25824954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr1 25824955 . T . PASS END=25824955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 25824956 . G . PASS END=25824957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr1 25870085 . G . PASS END=25870085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 25870090 . G . PASS END=25870090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 25870098 . G . PASS END=25870098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 25870110 . C . PASS END=25870110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 25870115 . G . PASS END=25870115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 25870120 . A . PASS END=25870120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 25870122 . G . PASS END=25870122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 25870131 . G . PASS END=25870131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 25870153 . T . PASS END=25870153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 25870190 . A . PASS END=25870209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 25870210 . G . PASS END=25870210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 25870211 . G . PASS END=25870214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 25870215 . G . PASS END=25870226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 25870227 . G . PASS END=25870227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 25870228 . G . PASS END=25870229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 25870230 . G . PASS END=25870230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 25870231 . C . PASS END=25870239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 25870240 . G . PASS END=25870241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:9:8:0,9,135:0,24,255:3,0 chr1 25870242 . C . PASS END=25870247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,227:4,0 chr1 25870248 . A . PASS END=25870248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,249:3,0 chr1 25870249 . G . PASS END=25870250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 25870251 . G . PASS END=25870259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 25870260 . G . LowGQ END=25870260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr1 25870261 . C . PASS END=25870267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 25870268 . C . PASS END=25870277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr1 25870285 . T . PASS END=25870285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr1 25876520 . A . PASS END=25876526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 25880412 . G . PASS END=25880415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 25880416 . T . PASS END=25880416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr1 25880417 . G . PASS END=25880440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:19,0 chr1 25880441 . G . PASS END=25880462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:25,0 chr1 25880463 . C . PASS END=25880463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 25880464 . T . PASS END=25880493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:26,0 chr1 25880494 . T . PASS END=25880494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 25880495 . A . PASS END=25880501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 25880502 . C . PASS END=25880541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 25880542 . G . PASS END=25880545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 25880546 . C . PASS END=25880555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr1 25881351 . G . PASS END=25881463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,176,255:40,0 chr1 25881467 . C . PASS END=25881467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 25883644 . G . PASS END=25883734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1150:0,82,255:40,0 chr1 25883735 . T . PASS END=25883750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,78,255:25,0 chr1 25883751 . G . PASS END=25883751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 25883752 . G . PASS END=25883755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 25883756 . A . PASS END=25883758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:18,0 chr1 25883760 . T . PASS END=25883760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 25883764 . C . PASS END=25883764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,63,255:12,0 chr1 25889135 . G . PASS END=25889207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,117,1755:0,122,255:40,0 chr1 25889560 . G . PASS END=25889573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 25889574 . G . PASS END=25889574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,646:0,36,255:19,0 chr1 25889575 . G . PASS END=25889579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 25889580 . A . PASS END=25889580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr1 25889581 . G . PASS END=25889588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 25889589 . A . PASS END=25889594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,737:0,49,255:19,0 chr1 25889595 . A . PASS END=25889600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 25889601 . C . PASS END=25889618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:19,0 chr1 25889619 . A . PASS END=25889619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 25889620 . G . PASS END=25889620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 25889621 . A . PASS END=25889630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,495:0,32,255:13,0 chr1 25889631 . C . PASS END=25889631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:9,2 chr1 25889632 . T C, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.204;ReadPosRankSum=-0.780;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:4,4,0:3,3,0:47:85,0,46,185,185,185:255,0,187:4,2:5.0000e+01,9.2155e-05,4.9498e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,5,3,4:5,2,4,3 chr1 25889633 . C . PASS END=25889633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:8,0 chr1 25889634 . C . PASS END=25889644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:10:0,24,360:0,30,255:9,0 chr1 25890152 . T . PASS END=25890152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 25890153 . G . PASS END=25890162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 25890163 . G . PASS END=25890163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr1 25890164 . G . PASS END=25890168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 25890169 . C . PASS END=25890169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 25890170 . T . PASS END=25890188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:17,0 chr1 25890189 . A G, 48.98 PASS DP=17;MQ=250.00;MQRankSum=3.367;ReadPosRankSum=2.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,7,0:0.412,0.000:17:4,4,0:6,3,0:48:84,0,50,250,329,579:220,0,255:9,0:4.8978e+01,7.6623e-05,5.3000e+01,2.5038e+02,3.6364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,4,3:5,5,3,4 chr1 25890190 . G . PASS END=25890193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 25890194 . A . PASS END=25890194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:14,0 chr1 25890195 . G . PASS END=25890226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 25890227 . C . PASS END=25890239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 25890240 . G . PASS END=25890240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 25890241 . G . PASS END=25890259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 25890260 . T . PASS END=25890260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 25890261 . G . PASS END=25890281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr1 25890282 . G . PASS END=25890282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 25890295 . G . PASS END=25890295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 25891656 . T . PASS END=25891656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 25891664 . G . PASS END=25891698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,114,1419:0,118,255:40,0 chr1 25891853 . G . PASS END=25891907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,110,1662:0,110,255:40,0 chr1 25893339 . G . PASS END=25893341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25893342 . T . PASS END=25893342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr1 25893343 . G . PASS END=25893348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:16,0 chr1 25893349 . T . PASS END=25893349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 25893350 . C . PASS END=25893368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:19,0 chr1 25893369 . C . PASS END=25893370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 25893371 . T . PASS END=25893371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 25893372 . G . PASS END=25893382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,876:0,66,255:23,0 chr1 25893383 . T . PASS END=25893383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 25893384 . G . PASS END=25893399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,847:0,61,255:26,0 chr1 25893400 . C . PASS END=25893411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:28,0 chr1 25893412 . T . PASS END=25893412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 25893413 . G . PASS END=25893413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 25893414 . C . PASS END=25893414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 25893415 . C . PASS END=25893417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:29,0 chr1 25893418 . T . PASS END=25893418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 25893419 . C . PASS END=25893429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 25893430 . T . PASS END=25893430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 25893431 . G . PASS END=25893483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1164:0,83,255:38,0 chr1 25893511 . G . PASS END=25893511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 25893546 . G . PASS END=25893546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 25893736 . G . PASS END=25893736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 25893742 . C . PASS END=25893742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 25893814 . C . PASS END=25893814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 25893913 . G . PASS END=25893913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 25893918 . A . PASS END=25893918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 25893961 . C . PASS END=25893961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 25894018 . C . PASS END=25894018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 25894090 . G . PASS END=25894090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 25894097 . T . PASS END=25894097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 25894200 . C . PASS END=25894200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 25894287 . G . PASS END=25894287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 25894293 . C . PASS END=25894293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 25894297 . G . PASS END=25894297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 25894304 . T . PASS END=25894304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 25894351 . C . PASS END=25894351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 25894360 . C . PASS END=25894360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 25894424 . G . PASS END=25894424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 25894444 . A . PASS END=25894444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:15:18:0,15,225:0,54,255:5,0 chr1 25894515 . G . PASS END=25894515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 25894523 . A . PASS END=25894523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 25894684 . G . PASS END=25894684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 25894716 . C . PASS END=25894716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 25894767 . C . PASS END=25894767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr1 25894858 . C . PASS END=25894858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 25894878 . C . PASS END=25894878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 25894913 . C . PASS END=25894913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 25894960 . T . PASS END=25894960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 25894998 . C . PASS END=25894998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 25895039 . A . PASS END=25895039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 25895160 . G . PASS END=25895160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 25895165 . C . PASS END=25895165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 25895195 . A . PASS END=25895195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 25895220 . G . PASS END=25895220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 25895307 . T . PASS END=25895307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 25911726 . A . PASS END=25911738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,109,1293:0,109,255:40,0 chr1 25911739 . T . PASS END=25911739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1153:0,78,255:37,0 chr1 25911740 . C . PASS END=25911756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:97:42:0,97,1615:0,97,255:40,0 chr1 25916660 . A . PASS END=25916672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1443:0,96,255:40,0 chr1 25944289 . A . PASS END=25944295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:17,0 chr1 25944296 . T . PASS END=25944298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 25944299 . G . PASS END=25944303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 25944304 . G . PASS END=25944304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 25944305 . T . PASS END=25944305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 25944306 . G . PASS END=25944316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 25944317 . T . PASS END=25944317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 25944318 . C . PASS END=25944357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,803:0,61,255:26,0 chr1 25944358 . C . PASS END=25944358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 25944359 . T . PASS END=25944367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:24,0 chr1 25944368 . T . PASS END=25944368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 25944369 . C . PASS END=25944371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 25944372 . C . PASS END=25944372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 25944373 . C . PASS END=25944377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 25944378 . G . PASS END=25944378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 25944379 . G . PASS END=25944379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 25944380 . G . PASS END=25944382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 25944383 . T . PASS END=25944391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:24,0 chr1 25944392 . T . PASS END=25944392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 25944393 . G . PASS END=25944412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:25,0 chr1 25944413 . T . PASS END=25944413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 25944414 . G . PASS END=25944420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 25944421 . C . PASS END=25944421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 25944422 . A . PASS END=25944423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 25944424 . T . PASS END=25944424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:21,0 chr1 25944425 . C . PASS END=25944428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 25944429 . T . PASS END=25944459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:17:0,44,675:0,44,255:19,0 chr1 25944460 . A . PASS END=25944460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:14,0 chr1 25944461 . C . PASS END=25944464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 25944465 . G . PASS END=25944465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:13,0 chr1 25944466 . C . PASS END=25944466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:11,0 chr1 25944467 . A . PASS END=25944468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 25944469 . C . PASS END=25944469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 25944470 . C . PASS END=25944481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,495:0,31,255:13,0 chr1 25944482 . T . PASS END=25944482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 25944483 . G . PASS END=25944484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 25944485 . T . PASS END=25944485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 25944486 . G . PASS END=25944491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 25944492 . A . PASS END=25944492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 25944493 . A . PASS END=25944503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 25944504 . T . PASS END=25944504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 25944505 . G . PASS END=25944513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 25944514 . C . PASS END=25944514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25944515 . G . PASS END=25944515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 25944516 . C . PASS END=25944516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 25944517 . G . PASS END=25944518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 25944519 . G . PASS END=25944519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 25944520 . C . PASS END=25944521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 25944522 . G . PASS END=25944522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 25944523 . G . PASS END=25944527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 25944528 . G . PASS END=25944531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:20:12:0,20,405:0,20,255:9,0 chr1 25944532 . C . PASS END=25944534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 25944535 . A . PASS END=25944536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:16:11:0,16,341:0,16,255:10,0 chr1 25944537 . C . PASS END=25944539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 25944540 . G . PASS END=25944541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 25944542 . C . PASS END=25944546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 25944547 . G . PASS END=25944547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 25944548 . C . PASS END=25944561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 25944562 . G . PASS END=25944595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 25944596 . G . PASS END=25944596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 25944597 . C . PASS END=25944600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 25944601 . A . PASS END=25944628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr1 25944629 . C . PASS END=25944662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,629:0,40,255:17,0 chr1 25944663 . G . PASS END=25944673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 25944674 . T . PASS END=25944674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 25944675 . C . PASS END=25944675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 25944676 . C . PASS END=25944680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 25944681 . C . PASS END=25944683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 25944684 . C . PASS END=25944690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 25944691 . G . PASS END=25944699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 25944700 . G . PASS END=25944703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 25944704 . T . PASS END=25944710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 25944711 . C . PASS END=25944712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,798:0,50,255:21,0 chr1 25944713 . G . PASS END=25944722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 25944723 . C . PASS END=25944723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 25944724 . A . PASS END=25944726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 25944727 . G . PASS END=25944727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:21,0 chr1 25944728 . C . PASS END=25944728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 25944729 . A . PASS END=25944729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 25944730 . T . PASS END=25944745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 25944746 . G . PASS END=25944748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 25944749 . A . PASS END=25944750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 25944751 . C . PASS END=25944767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,660:0,54,255:19,0 chr1 25944768 . G . PASS END=25944776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 25944777 . G . PASS END=25944796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 25944797 . A . PASS END=25944805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 25944806 . C . PASS END=25944806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 25944807 . C . PASS END=25944812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 25944813 . G . PASS END=25944820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 25944821 . T . PASS END=25944825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 25944826 . G . PASS END=25944828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:9,0 chr1 26012931 . A . PASS END=26013027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:91:47:0,91,1497:0,91,255:40,0 chr1 26066561 . G . PASS END=26066561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 26066562 . A . PASS END=26066565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 26066566 . A . PASS END=26066566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 26066567 . A . PASS END=26066570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:31,0 chr1 26066571 . C . PASS END=26066571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 26066572 . T . PASS END=26066876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:32:0,92,1294:0,92,255:40,0 chr1 26066877 . C . PASS END=26066901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,128,255:40,0 chr1 26073159 . G . PASS END=26073179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1241:0,89,255:37,0 chr1 26073180 . T . PASS END=26073180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1246:0,78,255:36,0 chr1 26073181 . C . PASS END=26073189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1356:0,100,255:39,0 chr1 26073190 . C . PASS END=26073190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1191:0,70,255:37,0 chr1 26073191 . C . PASS END=26073224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1427:0,90,255:40,0 chr1 26073225 . A . PASS END=26073225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1241:0,67,255:31,0 chr1 26073226 . G . PASS END=26073251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1148:0,83,255:34,0 chr1 26073252 . G . PASS END=26073252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:27,0 chr1 26073253 . A . PASS END=26073253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1093:0,80,255:28,0 chr1 26073254 . G . PASS END=26073254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 26073255 . A . PASS END=26073256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 26073257 . A . PASS END=26073257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,960:0,70,255:27,0 chr1 26073258 . G . PASS END=26073260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26073261 . T . PASS END=26073261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,950:0,56,255:26,0 chr1 26073262 . C . PASS END=26073263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26073264 . A . PASS END=26073264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,861:0,70,255:26,0 chr1 26073265 . C . PASS END=26073266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 26073267 . T . PASS END=26073267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,762:0,12,255:22,0 chr1 26073268 . G . PASS END=26073272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,938:0,67,255:25,0 chr1 26073273 . T . PASS END=26073274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:23,0 chr1 26075746 . A . PASS END=26075763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,102,1211:0,102,255:40,0 chr1 26075764 . T . PASS END=26075764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1291:0,76,255:37,0 chr1 26075765 . T . PASS END=26075826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1350:0,96,255:40,0 chr1 26079975 . G . PASS END=26079976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 26079977 . G . PASS END=26079986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:17,0 chr1 26079987 . A . PASS END=26079987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 26079988 . A . PASS END=26079996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,605:0,51,255:19,0 chr1 26079997 . G . PASS END=26079998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 26079999 . C . PASS END=26079999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 26080000 . T . PASS END=26080000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 26080001 . G . PASS END=26080004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 26080005 . G . PASS END=26080005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 26080006 . A . PASS END=26080007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26080008 . A . PASS END=26080008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,615:0,46,255:19,0 chr1 26080009 . A . PASS END=26080028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 26080029 . A . PASS END=26080039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 26080040 . A . PASS END=26080040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 26080041 . A . PASS END=26080063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,582:0,48,255:19,0 chr1 26080064 . C . PASS END=26080064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 26080065 . A . PASS END=26080066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26080067 . A . PASS END=26080067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 26080068 . A . PASS END=26080068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr1 26080069 . G . PASS END=26080069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26085083 . T . PASS END=26085094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1031:0,84,255:35,0 chr1 26085095 . C . PASS END=26085265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:35:0,82,1296:0,82,255:40,0 chr1 26085266 . T . PASS END=26085266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr1 26085267 . T . PASS END=26085272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 26090129 . C . PASS END=26090130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1134:0,85,255:33,0 chr1 26090365 . G . PASS END=26090456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1056:0,82,255:37,0 chr1 26090457 . A . PASS END=26090458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 26098148 . A . PASS END=26098263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:44:0,96,1440:0,119,255:40,0 chr1 26104596 . G . PASS END=26104602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:12,0 chr1 26104603 . A . PASS END=26104603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,333:0,6,255:10,0 chr1 26104604 . G . PASS END=26104604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26104605 . A . PASS END=26104605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 26104606 . C . PASS END=26104613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 26104614 . C . PASS END=26104614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 26104615 . T . PASS END=26104615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 26104616 . G . PASS END=26104616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 26104617 . A . PASS END=26104617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 26104618 . A . PASS END=26104633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:16,0 chr1 26104634 . G . PASS END=26104634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 26104635 . C . PASS END=26104641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,629:0,40,255:19,0 chr1 26104642 . A . PASS END=26104649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 26104650 . G . PASS END=26104650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 26104651 . A . PASS END=26104651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26104652 . G . PASS END=26104652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 26104653 . T . PASS END=26104653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26104654 . G . PASS END=26104654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 26104655 . G . PASS END=26104663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 26104664 . G . PASS END=26104664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 26104665 . A . PASS END=26104667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 26104668 . C . PASS END=26104668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 26104669 . T . PASS END=26104689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:23,0 chr1 26104690 . T . PASS END=26104690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 26104691 . G . PASS END=26104694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 26104695 . T . PASS END=26104695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 26104696 . G . PASS END=26104698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 26104699 . T . PASS END=26104699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 26104700 . C . PASS END=26104701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 26104702 . C . PASS END=26104702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 26104703 . C . PASS END=26104707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr1 26104708 . G . PASS END=26104708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:21,0 chr1 26104709 . C . PASS END=26104719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr1 26104720 . T . PASS END=26104720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,853:0,31,255:22,0 chr1 26104721 . T . PASS END=26104728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,825:0,61,255:26,0 chr1 26104729 . A . PASS END=26104732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 26104733 . T . PASS END=26104733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 26104734 . G . PASS END=26104737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 26104738 . A . PASS END=26104756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,878:0,62,255:26,0 chr1 26104757 . C . PASS END=26104764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26104765 . A . PASS END=26104766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,968:0,68,255:26,0 chr1 26104767 . C . PASS END=26104769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26104770 . G . PASS END=26104796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:24,0 chr1 26104797 . G . PASS END=26104797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 26104798 . A . PASS END=26104799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26104800 . T . PASS END=26104800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 26104801 . C . PASS END=26104804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 26104805 . C . PASS END=26104815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 26107431 . A . PASS END=26107576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:32:0,85,1142:0,85,255:40,0 chr1 26107577 . A . PASS END=26107577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1023:0,41,255:29,0 chr1 26107578 . G . PASS END=26107600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr1 26107601 . C . PASS END=26107601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:31,0 chr1 26107602 . T . PASS END=26107603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 26107742 . G . PASS END=26107751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:36:0,81,1251:0,81,255:36,0 chr1 26109076 . G . PASS END=26109191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1254:0,84,255:40,0 chr1 26110154 . G . PASS END=26110180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,106,1343:0,106,255:40,0 chr1 26110181 . T . PASS END=26110280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:38:0,96,1440:0,98,255:40,0 chr1 26110335 . G . PASS END=26110341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 26126649 . C . LowDepth;LowGQ END=26126649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126665 . G . LowDepth;LowGQ END=26126665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126680 . T . LowDepth;LowGQ END=26126680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126687 . T . LowDepth;LowGQ END=26126688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126702 . A . LowDepth;LowGQ END=26126703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126708 . C . LowDepth;LowGQ END=26126708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126710 . C . LowDepth;LowGQ END=26126710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126721 . C . LowDepth;LowGQ END=26126722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26126723 . T . LowDepth;LowGQ END=26126725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr1 26126726 . G . LowDepth END=26126762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 26126763 . C T, 5.46 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=178.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4603e+00,4.4702e+00,4.4605e+00,4.0230e+01,3.9240e+01,4.3230e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,1,0 chr1 26126764 . G . LowGQ END=26126830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,0,33:3,0 chr1 26126831 . T . PASS END=26126861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 26126862 . G . PASS END=26126880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 26126881 . G . PASS END=26126904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,108:3,0 chr1 26126907 . C . PASS END=26126907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,116:2,0 chr1 26126918 . C . PASS END=26126918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 26127531 . C . PASS END=26127531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 26127534 . G . PASS END=26127552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:94:33:0,94,1185:0,94,255:37,0 chr1 26127553 . T . PASS END=26127553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,1 chr1 26127554 . G . PASS END=26127554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:38:0,80,1369:0,80,255:37,1 chr1 26127555 . G . PASS END=26127555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:38,0 chr1 26127556 . G . PASS END=26127559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1376:0,114,255:38,0 chr1 26127560 . A . PASS END=26127560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:37,0 chr1 26127561 . G . PASS END=26127621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,99,255:40,0 chr1 26127622 . A . PASS END=26127623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 26127624 . T . PASS END=26127625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 26127626 . C . PASS END=26127628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 26127629 . A . PASS END=26127631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 26127632 . C . PASS END=26127632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:26,0 chr1 26127633 . A . PASS END=26127633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26127634 . T . PASS END=26127636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 26127637 . C . PASS END=26127638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26127639 . G . PASS END=26127652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,915:0,67,255:25,0 chr1 26131632 . G . PASS END=26131635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26131636 . C . PASS END=26131653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:62:21:0,62,620:0,62,255:24,0 chr1 26131654 . G A, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,13,0:0,12,0:72:160,75,0,968,75,968:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,11:0,0,10,15 chr1 26131655 . C . PASS END=26131656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 26131657 . A . PASS END=26131691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1047:0,81,255:39,0 chr1 26131692 . A . PASS END=26131762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,84,255:40,0 chr1 26131763 . A . PASS END=26131766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 26135068 . C . PASS END=26135068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 26135070 . G . PASS END=26135072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,819:0,61,255:25,0 chr1 26135073 . C . PASS END=26135075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 26135076 . C . PASS END=26135076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:27,0 chr1 26135077 . C . PASS END=26135262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1147:0,87,255:40,0 chr1 26135263 . C . PASS END=26135280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,64,255:26,0 chr1 26135517 . G . PASS END=26135524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 26135525 . C . PASS END=26135525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 26135526 . C . PASS END=26135542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 26135543 . G . PASS END=26135544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 26135545 . T . PASS END=26135546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26135547 . C . PASS END=26135557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 26135558 . C . PASS END=26135559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:21,0 chr1 26135560 . T . PASS END=26135574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 26135575 . T . PASS END=26135575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 26135576 . T . PASS END=26135595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 26135596 . C . PASS END=26135619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,645:0,54,255:18,0 chr1 26135620 . T . PASS END=26135620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 26135621 . C . PASS END=26135622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 26135623 . A . PASS END=26135623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 26135624 . C . PASS END=26135626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 26135627 . C . PASS END=26135637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:37:15:0,37,585:0,37,255:14,0 chr1 26135638 . T . PASS END=26135643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 26135648 . G . PASS END=26135648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26136172 . A . PASS END=26136172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 26136174 . G . PASS END=26136174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 26136175 . A . PASS END=26136181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,684:0,24,255:21,0 chr1 26136182 . C . PASS END=26136183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 26136184 . G . PASS END=26136184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 26136185 . A . PASS END=26136185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 26136186 . G . PASS END=26136186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 26136187 . T . PASS END=26136187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 26136188 . T . PASS END=26136198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,939:0,42,255:27,0 chr1 26136199 . G . PASS END=26136202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:29,0 chr1 26136203 . C . PASS END=26136203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 26136204 . G . PASS END=26136298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1148:0,83,255:40,0 chr1 26136299 . T . PASS END=26136312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,868:0,61,255:26,0 chr1 26136325 . C . PASS END=26136325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 26137945 . G . PASS END=26138026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:41:0,93,1474:0,93,255:40,0 chr1 26138032 . C . PASS END=26138032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 26138182 . A . PASS END=26138207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 26138208 . T . PASS END=26138208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26138209 . G . PASS END=26138209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 26138210 . T . PASS END=26138211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26138212 . C . PASS END=26138220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 26138221 . A . PASS END=26138224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 26138225 . T . PASS END=26138225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 26138226 . G . PASS END=26138226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 26138227 . G . PASS END=26138231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 26138232 . G . PASS END=26138232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 26138233 . G . PASS END=26138261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1111:0,80,255:33,0 chr1 26138262 . T C, 149.33 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:99:187,102,0,1310,102,1310:255,102,0:0,0:1.4933e+02,9.9329e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,20:0,0,20,14 chr1 26138263 . T . PASS END=26138273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1263:0,86,255:32,0 chr1 26138274 . C . PASS END=26138274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 26138275 . C . PASS END=26138299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1059:0,80,255:32,0 chr1 26138300 . A . PASS END=26138313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1188:0,96,255:32,0 chr1 26138314 . C . PASS END=26138317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 26138318 . G . PASS END=26138319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 26138320 . T . PASS END=26138337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr1 26138338 . C . PASS END=26138338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:22,0 chr1 26138339 . G . PASS END=26138348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 26138349 . G . PASS END=26138368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,54,255:19,0 chr1 26138369 . A . PASS END=26138369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 26138370 . G . PASS END=26138370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 26139175 . C . PASS END=26139175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26139178 . G . PASS END=26139247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,956:0,81,255:37,0 chr1 26139248 . T . PASS END=26139248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:29,0 chr1 26139249 . G . PASS END=26139270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:32,0 chr1 26139271 . C . PASS END=26139278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,80,255:25,0 chr1 26139279 . C . PASS END=26139283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:25:0,54,810:0,75,255:18,0 chr1 26139289 . G . PASS END=26139289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26140122 . A . PASS END=26140132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 26140369 . C . PASS END=26140369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 26140372 . G . PASS END=26140385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,662:0,51,255:19,0 chr1 26140386 . C . PASS END=26140398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:23,0 chr1 26140399 . T . PASS END=26140399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 26140400 . C . PASS END=26140411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 26140412 . G . PASS END=26140416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 26140417 . T . PASS END=26140420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:20,0 chr1 26140421 . C . PASS END=26140421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 26140422 . A . PASS END=26140427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:22,0 chr1 26140428 . C . PASS END=26140428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 26140429 . T . PASS END=26140438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,726:0,69,255:23,0 chr1 26140439 . C . PASS END=26140439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 26140440 . T . PASS END=26140452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:24,0 chr1 26140453 . G . PASS END=26140453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:22,0 chr1 26140454 . G . PASS END=26140459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 26140460 . G . PASS END=26140460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 26140461 . G . PASS END=26140484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:24,0 chr1 26140491 . G . PASS END=26140491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26140567 . G . PASS END=26140572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:31,0 chr1 26140573 . C A, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=4.305;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,17,0:0.531,0.000:32:8,9,0:7,8,0:48:85,0,50,514,536,1050:255,0,255:15,0:5.0000e+01,6.5751e-05,5.2886e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,8,9:9,6,8,9 chr1 26140574 . C . PASS END=26140610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1188:0,96,255:32,0 chr1 26140611 . A . PASS END=26140663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:34,0 chr1 26140664 . A . PASS END=26140670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:24,0 chr1 26140683 . C . PASS END=26140683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 26142025 . G . PASS END=26142025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 26142039 . G . PASS END=26142065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,900:0,62,255:26,0 chr1 26142066 . T . PASS END=26142113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,994:0,80,255:36,0 chr1 26142114 . A . PASS END=26142114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr1 26142115 . G . PASS END=26142142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:94:37:0,94,1131:0,94,255:38,0 chr1 26142143 . C . PASS END=26142143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:30,0 chr1 26142144 . A . PASS END=26142147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,104,255:32,0 chr1 26142148 . C . PASS END=26142169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:61:25:0,61,892:0,61,255:26,0 chr1 26142170 . G . PASS END=26142170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 26142171 . G . PASS END=26142171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26142172 . A . PASS END=26142172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 26142173 . G . PASS END=26142200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 26142201 . C . PASS END=26142207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 26142208 . A . PASS END=26142209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 26142292 . G . PASS END=26142292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26142424 . T . PASS END=26142424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26142476 . C . PASS END=26142476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 26142689 . C . PASS END=26142689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 26142888 . C . PASS END=26142888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 26142895 . A . PASS END=26142895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26142919 . C . PASS END=26142919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26142963 . G . PASS END=26142963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 26143151 . T . PASS END=26143151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:18,0 chr1 26143196 . T . PASS END=26143196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 26143209 . G . PASS END=26143209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26143316 . T . PASS END=26143316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 26143409 . C . PASS END=26143409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 26143440 . A . PASS END=26143440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 26143460 . A . PASS END=26143460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 26143542 . G . PASS END=26143542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 26143566 . A . PASS END=26143566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:16:24:0,16,611:0,16,255:20,0 chr1 26143615 . C . PASS END=26143615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26143644 . G . PASS END=26143644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:33,0 chr1 26143704 . A ATTTTG, 107.16 PASS DP=20;MQ=243.71;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,13,0:0,7,0:57:139,60,0,657,60,657:255,0,145:0,24:1.0716e+02,5.7158e+01,8.2835e-06,4.5000e+02,9.1928e+01,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,7,13:0,0,10,10 chr1 26144194 . A . PASS END=26144194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26144256 . G . PASS END=26144256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1209:0,96,255:32,0 chr1 26144367 . C . PASS END=26144367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 26144416 . G . PASS END=26144416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:15:13:0,15,225:0,39,255:5,0 chr1 26144436 . C . LowGQ END=26144436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:11,0:11:0:11:0,0,0:0,33,255:0,0 chr1 26144437 . TC T, 73.91 PASS DP=10;MQ=250.00;FractionInformativeReads=0.900 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,7,0:0,2,0:24:99,27,0,204,27,204:255,0,9:0,11:7.3914e+01,2.3914e+01,1.7678e-02,2.1364e+02,5.8684e+01,2.1664e+02:0.00,22.00,25.00,34.77,56.77,37.77:0,0,0,9:0,0,2,7 chr1 26144466 . C . PASS END=26144466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr1 26144612 . G . PASS END=26144612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 26144646 . T . PASS END=26144646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,116:2,0 chr1 26144684 . T . PASS END=26144684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 26149510 . A . PASS END=26149518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,104,255:37,0 chr1 26149596 . A . PASS END=26149609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1034:0,90,255:30,0 chr1 26149610 . A . PASS END=26149619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 26149729 . A . PASS END=26149729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 26149730 . G . PASS END=26149730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 26149731 . G . PASS END=26149734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26149735 . G . PASS END=26149735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 26149736 . G . PASS END=26149747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,681:0,41,255:19,0 chr1 26149748 . G . PASS END=26149807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,751:0,60,255:23,0 chr1 26149808 . A . PASS END=26149814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,66,255:18,0 chr1 26149837 . A . PASS END=26149858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr1 26149859 . T . PASS END=26149865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,35,255:13,0 chr1 26149866 . T . PASS END=26149866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 26149867 . A . PASS END=26149868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 26149869 . A . PASS END=26149869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 26149870 . C . PASS END=26149886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 26149887 . C . PASS END=26149897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 26149898 . C . PASS END=26149926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 26149927 . G . PASS END=26149930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 26150135 . A . PASS END=26150144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 26150145 . T . PASS END=26150145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:30,0 chr1 26150146 . C . PASS END=26150153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1202:0,93,255:31,0 chr1 26150154 . A . PASS END=26150158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,79,255:26,0 chr1 26150159 . C . PASS END=26150224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1142:0,85,255:36,0 chr1 26150225 . C . PASS END=26150233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,87,255:26,0 chr1 26150234 . T . PASS END=26150234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,730:0,34,255:20,0 chr1 26150235 . T . PASS END=26150239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 26152793 . A . PASS END=26152795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 26152796 . C . PASS END=26152835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,143,255:40,0 chr1 26152836 . C . PASS END=26152872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,173,255:40,0 chr1 26152873 . G A, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.433;ReadPosRankSum=4.618;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,34,0:0.586,0.000:58:9,16,0:15,18,0:47:85,0,47,1179,822,2001:255,0,255:23,0:5.0000e+01,8.3354e-05,5.0375e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,12,22:12,12,20,14 chr1 26152874 . G . PASS END=26152902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,158,255:40,0 chr1 26153106 . G . PASS END=26153106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 26153107 . A . PASS END=26153107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 26153108 . G . PASS END=26153147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:34,0 chr1 26153148 . T . PASS END=26153148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:33,0 chr1 26153149 . C . PASS END=26153207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:34,0 chr1 26153208 . T . PASS END=26153208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1173:0,74,255:31,0 chr1 26153209 . C . PASS END=26153284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1148:0,90,255:37,0 chr1 26153285 . G . PASS END=26153285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 26153286 . C . PASS END=26153291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26153292 . T . PASS END=26153317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,978:0,67,255:26,0 chr1 26156000 . C . PASS END=26156155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:37:0,82,1327:0,82,255:40,0 chr1 26156156 . T . PASS END=26156156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1394:0,73,255:33,0 chr1 26156157 . C . PASS END=26156184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:38:0,85,1321:0,85,255:39,0 chr1 26156185 . T . PASS END=26156185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1417:0,71,255:32,0 chr1 26156186 . G . PASS END=26156187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,99,1485:0,101,255:33,0 chr1 26156188 . T . PASS END=26156188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1270:0,78,255:32,0 chr1 26156189 . G . PASS END=26156241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1053:0,88,255:36,0 chr1 26156242 . T . PASS END=26156242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1194:0,64,255:30,0 chr1 26156243 . C . PASS END=26156301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1125:0,80,255:35,0 chr1 26156302 . A . PASS END=26156316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,74,255:26,0 chr1 26156317 . G . PASS END=26156321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:21:0,57,855:0,63,255:19,0 chr1 26158412 . G . PASS END=26158517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:39:0,84,1309:0,84,255:40,0 chr1 26158579 . T . PASS END=26158649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:37:0,96,1440:0,111,255:40,0 chr1 26161484 . T . PASS END=26162206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:38:0,86,1305:0,86,255:40,0 chr1 26162207 . G . PASS END=26162207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr1 26162208 . G . PASS END=26162325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,96,255:40,0 chr1 26162326 . C . PASS END=26162337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:27:0,77,1147:0,77,255:27,0 chr1 26163904 . C . PASS END=26163909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1266:0,94,255:37,0 chr1 26163910 . G . PASS END=26163910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr1 26163911 . C . PASS END=26164045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:37:0,109,1396:0,109,255:40,0 chr1 26185771 . C . PASS END=26185777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 26185778 . T . PASS END=26185778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 26185779 . T . PASS END=26185790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 26185791 . G . PASS END=26185791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 26185792 . C . PASS END=26185792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26185793 . G . PASS END=26185793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 26185794 . C . PASS END=26185802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26185803 . C . PASS END=26185806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 26185807 . C . PASS END=26185807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr1 26185808 . C . PASS END=26185823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 26185824 . C . PASS END=26185828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:18:0,33,495:0,54,255:13,0 chr1 26185829 . T . PASS END=26185839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr1 26185840 . C . PASS END=26185845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 26185846 . C . PASS END=26185846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 26185847 . A . PASS END=26185848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 26189290 . T . PASS END=26189293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1449:0,90,255:40,0 chr1 26189294 . T . PASS END=26189294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1205:0,73,255:37,0 chr1 26189295 . T . PASS END=26189392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:85:41:0,85,1362:0,85,255:40,0 chr1 26189393 . T . PASS END=26189393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1433:0,79,255:40,0 chr1 26189394 . G . PASS END=26189425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:32:0,82,1170:0,82,255:40,0 chr1 26189426 . G . PASS END=26189426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 26189427 . G . PASS END=26189440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 26189441 . T . PASS END=26189452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,1035:0,60,255:24,0 chr1 26189453 . A . PASS END=26189453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 26189454 . C . PASS END=26189457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 26189458 . C . PASS END=26189488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 26189489 . A . PASS END=26189494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 26189495 . T . PASS END=26189495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 26189496 . G . PASS END=26189496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 26189497 . G . PASS END=26189497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 26189498 . A . PASS END=26189500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,829:0,66,255:22,0 chr1 26189501 . A . PASS END=26189501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 26189502 . G . PASS END=26189503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26189504 . T . PASS END=26189504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 26189505 . G . PASS END=26189511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 26189512 . C . PASS END=26189514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 26189515 . C . PASS END=26189517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 26189518 . G . PASS END=26189518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 26189519 . A . PASS END=26189530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 26189531 . C . PASS END=26189531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 26189532 . T . PASS END=26189537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:22,0 chr1 26189538 . G . PASS END=26189538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 26189539 . G . PASS END=26189544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 26189545 . G . PASS END=26189545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 26189546 . C . PASS END=26189547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26189548 . C . PASS END=26189548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:19,0 chr1 26189549 . T . PASS END=26189549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 26189550 . C . PASS END=26189550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 26189551 . G . PASS END=26189558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,893:0,67,255:27,0 chr1 26189559 . A . PASS END=26189563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26189564 . G . PASS END=26189570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 26189571 . A . PASS END=26189572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 26189573 . G . PASS END=26189573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:27,0 chr1 26189574 . C . PASS END=26189574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 26189575 . A . PASS END=26189575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 26189576 . G . PASS END=26189578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:83:28:0,83,810:0,83,255:28,0 chr1 26189579 . G . PASS END=26189579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 26189580 . C . PASS END=26189580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 26189581 . C . PASS END=26189581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 26189582 . A . PASS END=26189600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1030:0,87,255:31,0 chr1 26189601 . G . PASS END=26189603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 26189604 . A . PASS END=26189608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 26189609 . T . PASS END=26189609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 26189610 . G . PASS END=26189610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 26189611 . G . PASS END=26189611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 26189612 . T . PASS END=26189614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 26189615 . A . PASS END=26189619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 26189620 . A . PASS END=26189621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 26189622 . C . PASS END=26189623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26189624 . G . PASS END=26189651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,939:0,77,255:26,0 chr1 26189652 . C T, 48.50 PASS DP=26;MQ=248.91;MQRankSum=4.256;ReadPosRankSum=2.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:8,6,0:7,5,0:47:83,0,50,365,536,901:255,0,255:15,0:4.8503e+01,8.3095e-05,5.3000e+01,3.6461e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,5,6:7,8,6,5 chr1 26189653 . G . PASS END=26189666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 26189667 . C . PASS END=26189667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 26189668 . C . PASS END=26189678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,900:0,69,255:24,0 chr1 26189679 . T . PASS END=26189679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 26189680 . G . PASS END=26189689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 26189690 . T . PASS END=26189690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 26189691 . A . PASS END=26189691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 26189692 . G . PASS END=26189694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:22,0 chr1 26189695 . C . PASS END=26189702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:24:0,57,855:0,64,255:19,0 chr1 26189703 . A . PASS END=26189703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26189704 . G . PASS END=26189709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26189710 . C . PASS END=26189727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 26189728 . C . PASS END=26189728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 26189729 . A . PASS END=26189750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,892:0,69,255:23,0 chr1 26189751 . A . PASS END=26189751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 26189752 . C . PASS END=26189785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,886:0,63,255:25,0 chr1 26189786 . G . PASS END=26189786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 26189787 . C . PASS END=26189804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 26189805 . G . PASS END=26189805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 26189806 . C . PASS END=26189806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 26189807 . A . PASS END=26189807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 26189808 . G . PASS END=26189828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr1 26189829 . C . PASS END=26189829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 26189830 . A . PASS END=26189835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 26189836 . G . PASS END=26189837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 26189838 . C . PASS END=26189851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:26,0 chr1 26189852 . T . PASS END=26189855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26189856 . A . PASS END=26189856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 26189857 . G . PASS END=26189861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 26189862 . G . PASS END=26189867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 26189868 . A . PASS END=26189868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:26,0 chr1 26189869 . G . PASS END=26189869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26189870 . G . PASS END=26189872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 26189873 . C . PASS END=26189892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,992:0,81,255:28,0 chr1 26189893 . C . PASS END=26189894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 26189895 . C . PASS END=26189904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:28,0 chr1 26189905 . G . PASS END=26189905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:27,0 chr1 26189906 . T . PASS END=26189906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26189907 . C . PASS END=26189908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 26189909 . A . PASS END=26189911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 26189912 . A . PASS END=26189919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr1 26189920 . G . PASS END=26189920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 26189921 . C . PASS END=26189922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:29,0 chr1 26189923 . G . PASS END=26189926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:31,0 chr1 26189927 . T . PASS END=26189927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 26189928 . G . PASS END=26189959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1141:0,93,255:32,0 chr1 26189960 . G . PASS END=26189960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 26189961 . C . PASS END=26189970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:31,0 chr1 26189971 . G . PASS END=26189971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:27,0 chr1 26189972 . A . PASS END=26189975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 26189976 . A . PASS END=26189976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 26189977 . G . PASS END=26189977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 26189978 . A . PASS END=26189978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr1 26189979 . G . PASS END=26189980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 26189981 . T . PASS END=26190009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,833:0,72,255:26,0 chr1 26190010 . G . PASS END=26190010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 26190011 . A . PASS END=26190011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26190012 . G . PASS END=26190012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 26190013 . G . PASS END=26190016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 26190017 . A . PASS END=26190017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 26190018 . G . PASS END=26190028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 26190029 . T . PASS END=26190029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,687:0,52,255:21,0 chr1 26190030 . C . PASS END=26190032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 26190033 . C . PASS END=26190033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 26190034 . C . PASS END=26190034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26190035 . C . PASS END=26190035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,799:0,33,255:21,0 chr1 26190036 . A . PASS END=26190061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 26190062 . G . PASS END=26190062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 26190063 . C . PASS END=26190071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 26190072 . G . PASS END=26190077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:24:0,51,765:0,55,255:19,0 chr1 26190078 . G . PASS END=26190085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:21,0 chr1 26190086 . G . PASS END=26190086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 26190087 . C . PASS END=26190094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 26190095 . A . PASS END=26190095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 26190096 . G . PASS END=26190097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 26190098 . T . PASS END=26190098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 26190099 . G . PASS END=26190110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,817:0,66,255:23,0 chr1 26190111 . T . PASS END=26190111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 26190112 . C . PASS END=26190113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 26190114 . C . PASS END=26190114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 26190115 . G . PASS END=26190115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:21,0 chr1 26190116 . G . PASS END=26190144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,726:0,63,255:22,0 chr1 26190145 . G . PASS END=26190145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,634:0,49,255:21,0 chr1 26190146 . A . PASS END=26190150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,742:0,66,255:23,0 chr1 26190151 . G . PASS END=26190151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 26190152 . A . PASS END=26190152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 26190153 . A . PASS END=26190153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 26190154 . G . PASS END=26190184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 26190185 . G . PASS END=26190187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26190188 . T . PASS END=26190189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 26190190 . G . PASS END=26190194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 26190195 . A . PASS END=26190195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 26190196 . C . PASS END=26190196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 26190197 . G . PASS END=26190201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 26190202 . C . PASS END=26190205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26190206 . A . PASS END=26190212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 26190213 . G . PASS END=26190213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 26190214 . C . PASS END=26190233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1030:0,68,255:26,0 chr1 26190234 . C . PASS END=26190236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26190237 . T . PASS END=26190255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:27,0 chr1 26190256 . C . PASS END=26190286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,918:0,81,255:29,0 chr1 26190287 . C . PASS END=26190298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,71,255:26,0 chr1 26190299 . A . PASS END=26190317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:19,0 chr1 26190318 . G . PASS END=26190328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 26190329 . A . PASS END=26190330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:9,0 chr1 26212214 . C . PASS END=26212214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 26212215 . T . PASS END=26212227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 26212228 . A . PASS END=26212228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,681:0,55,255:22,0 chr1 26212229 . G . PASS END=26212238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,986:0,72,255:26,0 chr1 26212239 . C . PASS END=26212242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 26212243 . T . PASS END=26212243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 26212244 . A . PASS END=26212335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1070:0,84,255:35,0 chr1 26212336 . C . PASS END=26212360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 26227507 . T . PASS END=26227560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:62:0,120,1800:0,131,255:40,0 chr1 26227561 . T . PASS END=26227578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,134,255:40,0 chr1 26227982 . C . PASS END=26227983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1307:0,111,255:37,0 chr1 26227984 . T . PASS END=26227984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:36,0 chr1 26227985 . C . PASS END=26227985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1396:0,111,255:37,0 chr1 26227986 . T . PASS END=26227986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:35,0 chr1 26227987 . C . PASS END=26228162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:30:0,84,1106:0,84,255:40,0 chr1 26228163 . G . PASS END=26228163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:25,0 chr1 26228164 . C . PASS END=26228171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26228172 . G . PASS END=26228173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 26230132 . C . PASS END=26230263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:36:0,87,1305:0,90,255:40,0 chr1 26230264 . C . PASS END=26230268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 26230269 . C . PASS END=26230273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 26230274 . G . PASS END=26230299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,68,255:25,0 chr1 26230300 . G . PASS END=26230304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 26231155 . C . PASS END=26231167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,159,255:40,0 chr1 26288480 . C . PASS END=26288488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 26288489 . G . PASS END=26288492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 26288493 . A . PASS END=26288493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 26288494 . G . PASS END=26288532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1121:0,90,255:37,0 chr1 26288533 . C . PASS END=26288551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:25,0 chr1 26288552 . T . PASS END=26288574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,631:0,54,255:20,0 chr1 26299049 . C . PASS END=26299050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 26299051 . A . PASS END=26299051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr1 26299052 . G . PASS END=26299055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 26299056 . C . PASS END=26299056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 26299057 . T . PASS END=26299058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 26299059 . C . PASS END=26299059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 26299060 . T . PASS END=26299061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 26299062 . C . PASS END=26299062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr1 26299063 . A . PASS END=26299066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 26299067 . A . PASS END=26299067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 26299068 . G . PASS END=26299076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,529:0,48,255:16,0 chr1 26299077 . G . PASS END=26299077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 26299078 . G . PASS END=26299078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 26299079 . C . PASS END=26299080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 26299081 . C . PASS END=26299081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 26299082 . G . PASS END=26299090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr1 26299091 . C . PASS END=26299094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 26299095 . C . PASS END=26299097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 26299098 . C . PASS END=26299203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:29:0,86,1072:0,86,255:40,0 chr1 26300971 . A . PASS END=26300982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,607:0,48,255:19,0 chr1 26300983 . A . PASS END=26301120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1169:0,80,255:40,0 chr1 26301121 . G . PASS END=26301129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,1035:0,66,255:25,0 chr1 26301130 . G . PASS END=26301133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:30:0,57,855:0,77,255:19,0 chr1 26301134 . C . PASS END=26301137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:22,0 chr1 26301138 . A . PASS END=26301141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:28:0,51,765:0,68,255:19,0 chr1 26303173 . C . PASS END=26303264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1341:0,95,255:40,0 chr1 26308855 . C . PASS END=26308964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1161:0,86,255:40,0 chr1 26308965 . G . PASS END=26308968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:21,0 chr1 26310437 . C . PASS END=26310588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:36:0,84,1260:0,101,255:40,0 chr1 26310589 . C . PASS END=26310593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 26310951 . C . PASS END=26311019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1230:0,91,255:40,0 chr1 26312245 . C . PASS END=26312264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,160,255:40,0 chr1 26314722 . C . PASS END=26314782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:38:0,84,1349:0,84,255:40,0 chr1 26314783 . A . PASS END=26314783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1414:0,79,255:40,0 chr1 26314784 . G . PASS END=26314818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:37:0,84,1252:0,84,255:40,0 chr1 26315939 . C . PASS END=26315967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1169:0,80,255:35,0 chr1 26315968 . C . PASS END=26315968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:34,0 chr1 26315969 . A . PASS END=26315979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1294:0,92,255:37,0 chr1 26315980 . A . PASS END=26315980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:35,0 chr1 26315981 . A . PASS END=26316044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1283:0,84,255:40,0 chr1 26316045 . G . PASS END=26316045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:31,0 chr1 26316046 . G . PASS END=26316046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 26316047 . T . PASS END=26316047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1015:0,63,255:29,0 chr1 26316048 . C . PASS END=26316060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:31,0 chr1 26316061 . T . PASS END=26316061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:28,0 chr1 26316062 . G . PASS END=26316063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26316064 . C . PASS END=26316070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,76,255:22,0 chr1 26316071 . A . PASS END=26316092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 26317218 . C . PASS END=26317354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:51:0,120,1800:0,137,255:40,0 chr1 26323939 . C . PASS END=26323950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,135,255:40,0 chr1 26323951 . G . PASS END=26323963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:55:0,120,1800:0,132,255:40,0 chr1 26349138 . A . PASS END=26349149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:16,0 chr1 26349150 . A . PASS END=26349150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 26349151 . G . PASS END=26349157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:16,0 chr1 26349158 . A . PASS END=26349158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,480:0,31,255:15,0 chr1 26349159 . A . PASS END=26349183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,590:0,48,255:17,0 chr1 26349184 . C . PASS END=26349184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 26349185 . C . PASS END=26349188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 26349189 . T . PASS END=26349189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 26349190 . G . PASS END=26349191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 26349192 . C . PASS END=26349195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26349196 . T . PASS END=26349221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,521:0,42,255:16,0 chr1 26349222 . C . PASS END=26349222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 26349223 . T . PASS END=26349235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 26349236 . A . PASS END=26349236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 26349237 . T . PASS END=26349244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 26349245 . C . PASS END=26349245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 26349246 . A . PASS END=26349247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 26349248 . A . PASS END=26349248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr1 26349249 . C . PASS END=26349250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 26349251 . T . PASS END=26349251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 26349252 . C . PASS END=26349252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 26349253 . G . PASS END=26349268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 26349269 . A . PASS END=26349275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 26349276 . C . PASS END=26349298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 26349299 . C . PASS END=26349299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 26349300 . C . PASS END=26349301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26349302 . G . PASS END=26349303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 26349304 . A . PASS END=26349304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 26349305 . G . PASS END=26349308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 26349309 . T . PASS END=26349309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 26349310 . T . PASS END=26349314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 26349315 . C . PASS END=26349315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 26349316 . A . PASS END=26349320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 26349321 . G . PASS END=26349321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 26349322 . G . PASS END=26349324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 26349325 . A . PASS END=26349325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:11,0 chr1 26349326 . G . PASS END=26349331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 26349332 . A . PASS END=26349332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 26349333 . G . PASS END=26349335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 26349336 . G . PASS END=26349336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 26349337 . A . PASS END=26349345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 26349346 . C . PASS END=26349370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 26349371 . C . PASS END=26349371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 26349372 . A . PASS END=26349381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 26349382 . G . PASS END=26349382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 26349383 . G . PASS END=26349402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,366:0,33,255:13,0 chr1 26349403 . C . PASS END=26349403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 26349404 . A . PASS END=26349406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 26349407 . G . PASS END=26349407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26349408 . T . PASS END=26349408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 26349409 . G . PASS END=26349412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26349413 . G . PASS END=26349413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 26349414 . G . PASS END=26349415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 26349416 . C . PASS END=26349416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 26349417 . G . PASS END=26349438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,47,255:19,0 chr1 26349439 . A . PASS END=26349451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 26349452 . A . PASS END=26349452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 26349453 . A . PASS END=26349454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 26349455 . C . PASS END=26349457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26349458 . C . PASS END=26349499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:21,0 chr1 26349500 . T . PASS END=26349521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 26349522 . G . PASS END=26349539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr1 26349540 . C . PASS END=26349559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr1 26349560 . C . PASS END=26349588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,426:0,33,255:13,0 chr1 26349589 . T . PASS END=26349589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 26349590 . G . PASS END=26349604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 26349605 . C . PASS END=26349616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:15,0 chr1 26349617 . G . PASS END=26349618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 26349619 . T . PASS END=26349621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 26349622 . T . PASS END=26349624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26349625 . G . PASS END=26349653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:17,0 chr1 26349654 . T . PASS END=26349654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 26349655 . T . PASS END=26349687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,607:0,51,255:19,0 chr1 26349688 . G . PASS END=26349688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 26349689 . C . PASS END=26349689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 26349690 . C . PASS END=26349690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 26349691 . C . PASS END=26349691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 26349692 . C . PASS END=26349717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:24,0 chr1 26349718 . T . PASS END=26349718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 26349719 . T . PASS END=26349753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,872:0,66,255:25,0 chr1 26349754 . C . PASS END=26349754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 26349755 . G . PASS END=26349760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 26349761 . A . PASS END=26349761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 26349762 . G . PASS END=26349772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr1 26349773 . T . PASS END=26349773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 26349774 . G . PASS END=26349778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 26349779 . G . PASS END=26349779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 26349780 . C . PASS END=26349815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 26349816 . C . PASS END=26349816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:20,0 chr1 26349817 . T . PASS END=26349817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 26349818 . A . PASS END=26349818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 26349819 . G . PASS END=26349821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 26349822 . C . PASS END=26349822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 26349823 . T . PASS END=26349825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 26349826 . A . PASS END=26349827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 26349828 . G . PASS END=26349830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 26349831 . G . PASS END=26349831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:22,0 chr1 26349832 . A . PASS END=26349833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 26349834 . A . PASS END=26349834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 26349835 . G . PASS END=26349867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:26,0 chr1 26349868 . C . PASS END=26349868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 26349869 . T . PASS END=26349869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 26349870 . G . PASS END=26349872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 26349873 . T . PASS END=26349879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 26349880 . G . PASS END=26349880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 26349881 . G . PASS END=26349897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:26,0 chr1 26349898 . A . PASS END=26349898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:20,0 chr1 26349899 . A . PASS END=26349909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 26349910 . C . PASS END=26349915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 26349916 . A . PASS END=26349916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26355684 . G . PASS END=26355777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:36,0 chr1 26356091 . G . PASS END=26356096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 26356097 . T . PASS END=26356097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 26356098 . G . PASS END=26356106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 26356107 . T . PASS END=26356107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 26356108 . G . PASS END=26356185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,817:0,61,255:26,0 chr1 26356186 . G . PASS END=26356186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 26356187 . C . PASS END=26356195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,908:0,72,255:25,0 chr1 26356196 . C . PASS END=26356196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 26356197 . A . PASS END=26356198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 26356967 . G . PASS END=26356986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr1 26356987 . G . PASS END=26357000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr1 26357001 . G . PASS END=26357001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 26357002 . G . PASS END=26357007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:25,0 chr1 26357008 . C . PASS END=26357008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 26357009 . G . PASS END=26357023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,894:0,75,255:25,0 chr1 26357024 . A . PASS END=26357024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 26357025 . C . PASS END=26357054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr1 26357055 . C . PASS END=26357076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 26357077 . C . PASS END=26357086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 26357623 . G . PASS END=26357646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,243:0,24,243:9,0 chr1 26357647 . A . PASS END=26357647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 26357648 . C . PASS END=26357655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 26357656 . C A, 47.79 PASS DP=9;MQ=250.00;MQRankSum=2.054;ReadPosRankSum=2.054;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,3,0:0.333,0.000:9:3,3,0:3,0,0:47:83,0,50,107,215,322:89,0,175:6,0:4.7786e+01,9.3967e-05,5.3000e+01,1.0731e+02,2.4943e+02,3.2497e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,2,1:3,3,2,1 chr1 26357657 . A . PASS END=26357661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,317:0,27,255:9,0 chr1 26357662 . T . PASS END=26357662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 26357663 . C . PASS END=26357681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 26357682 . C . PASS END=26357682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 26357683 . C . PASS END=26357688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 26357689 . G . PASS END=26357693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 26357694 . C . PASS END=26357746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,164:0,15,164:6,0 chr1 26357747 . T . LowGQ END=26357747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 26357748 . G . PASS END=26357752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 26357753 . A . PASS END=26357755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,111:3,0 chr1 26357951 . G . PASS END=26358049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 26358050 . G . PASS END=26358057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:12,0 chr1 26358887 . A . PASS END=26358887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 26358888 . T . PASS END=26358898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 26358899 . T . PASS END=26358899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 26358900 . G . PASS END=26358912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 26358913 . G . PASS END=26358913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 26358914 . C . PASS END=26358923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,821:0,66,255:24,0 chr1 26358924 . C . PASS END=26358925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 26358926 . A . PASS END=26358959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 26358960 . T . PASS END=26358960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 26358961 . T . PASS END=26358963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 26358964 . T . PASS END=26358966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 26358967 . G . PASS END=26358967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26358968 . C . PASS END=26358976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 26359168 . A . PASS END=26359169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 26359170 . C . PASS END=26359170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 26359171 . A . PASS END=26359197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1174:0,92,255:36,0 chr1 26359198 . A . PASS END=26359198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:31,0 chr1 26359199 . G . PASS END=26359208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,102,255:33,0 chr1 26359209 . C . PASS END=26359212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 26359720 . G . PASS END=26359772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,115,1521:0,115,255:40,0 chr1 26359773 . C . PASS END=26359773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:67:50:0,67,1525:0,67,255:40,0 chr1 26359774 . C . PASS END=26359806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:43:0,96,1440:0,129,255:40,0 chr1 26360187 . G . PASS END=26360341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:83:35:0,83,1123:0,83,255:40,0 chr1 26360342 . C . PASS END=26360342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:28,0 chr1 26360343 . C . PASS END=26360347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:28,0 chr1 26361327 . G . PASS END=26361338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:25,0 chr1 26361339 . T . PASS END=26361339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 26361340 . C . PASS END=26361444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,988:0,84,255:37,0 chr1 26361445 . C . PASS END=26361445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 26361446 . C . PASS END=26361446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26361447 . C . PASS END=26361454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:22,0 chr1 26361455 . A . PASS END=26361459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:24:0,57,855:0,72,255:19,0 chr1 26361460 . C . PASS END=26361460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26361461 . C . PASS END=26361478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 26361479 . A . PASS END=26361495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 26361656 . G . PASS END=26361657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 26361658 . G . PASS END=26361702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,504:0,41,255:17,0 chr1 26361703 . C . PASS END=26361706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 26361707 . T . PASS END=26361707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 26361708 . G . PASS END=26361717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,709:0,63,255:22,0 chr1 26361718 . G . PASS END=26361718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 26361719 . A . PASS END=26361719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 26361720 . T . PASS END=26361720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 26361721 . A . PASS END=26361723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,898:0,72,255:24,0 chr1 26361724 . G . PASS END=26361724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 26361725 . G . PASS END=26361737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr1 26361738 . A . PASS END=26361738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:22,0 chr1 26361739 . C . PASS END=26361742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:23,0 chr1 26361743 . C . PASS END=26361743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:21,0 chr1 26361744 . C . PASS END=26361754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 26361755 . T . PASS END=26361755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 26361756 . C . PASS END=26361798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,779:0,72,255:26,0 chr1 26361799 . C . PASS END=26361799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 26361800 . G . PASS END=26361800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 26361801 . T . PASS END=26361801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 26361802 . G . PASS END=26361803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 26361804 . A . PASS END=26361804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 26361805 . G . PASS END=26361814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,854:0,61,255:25,0 chr1 26361815 . T . PASS END=26361815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 26361816 . A . PASS END=26361819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr1 26361820 . C . PASS END=26361828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr1 26361829 . G . PASS END=26361829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 26361830 . A . PASS END=26361836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,53,255:16,0 chr1 26361837 . A . PASS END=26361838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 26365651 . T . PASS END=26365653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 26365654 . G . PASS END=26365666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:25,0 chr1 26365667 . T . PASS END=26365667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 26365668 . G . PASS END=26365673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,908:0,61,255:25,0 chr1 26365674 . C . PASS END=26365679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 26365680 . A . PASS END=26365680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,870:0,64,255:26,0 chr1 26365681 . G . PASS END=26365690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 26365691 . T . PASS END=26365691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 26365692 . C . PASS END=26365702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1180:0,90,255:31,0 chr1 26365703 . T . PASS END=26365703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 26365704 . C . PASS END=26365720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 26365721 . A . PASS END=26365721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1047:0,38,255:28,0 chr1 26365722 . C . PASS END=26365730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 26365731 . A . PASS END=26365731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 26365732 . G . PASS END=26365732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 26365733 . T . PASS END=26365734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 26365735 . G . PASS END=26365737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 26365738 . C . PASS END=26365753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr1 26365754 . C . PASS END=26365762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr1 26365763 . G . PASS END=26365780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 26365781 . G . PASS END=26365796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:18,0 chr1 26366268 . C . PASS END=26366283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,895:0,78,255:26,0 chr1 26366284 . A . PASS END=26366285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26366286 . A . PASS END=26366286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 26366287 . C . PASS END=26366296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr1 26366297 . T . PASS END=26366297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 26366298 . G . PASS END=26366298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 26366299 . G . PASS END=26366299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 26366300 . G . PASS END=26366372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1155:0,90,255:34,0 chr1 26366373 . C . PASS END=26366389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,71,255:25,0 chr1 26366390 . C . PASS END=26366402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:22:0,57,855:0,59,255:19,0 chr1 26368191 . C . PASS END=26368296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,120,1800:0,123,255:40,0 chr1 26369040 . C . PASS END=26369051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:92:31:0,92,1105:0,92,255:36,0 chr1 26369052 . A . PASS END=26369052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1167:0,69,255:35,0 chr1 26369053 . A . PASS END=26369141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:36:0,82,1279:0,82,255:40,0 chr1 26369142 . C . PASS END=26369144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr1 26369145 . G . PASS END=26369145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1426:0,87,255:38,0 chr1 26369146 . T . PASS END=26369146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1184:0,78,255:38,0 chr1 26369147 . T . PASS END=26369173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:32:0,82,1260:0,82,255:39,0 chr1 26369174 . C . PASS END=26369187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,73,255:25,0 chr1 26369188 . G . PASS END=26369199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,60,255:18,0 chr1 26369889 . A . PASS END=26369909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:18,0 chr1 26369910 . C . PASS END=26369910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 26369911 . A . PASS END=26369925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 26369926 . G . PASS END=26369955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:23,0 chr1 26369956 . C . PASS END=26369956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 26369957 . A . PASS END=26369975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 26369976 . G . PASS END=26370008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:19,0 chr1 26370009 . A . PASS END=26370013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 26370014 . C . PASS END=26370025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:9:0,21,315:0,27,255:9,0 chr1 26370026 . C . PASS END=26370036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 26370037 . A . PASS END=26370041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 26370042 . T . PASS END=26370042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 26370789 . C . PASS END=26370792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 26370793 . T . PASS END=26370793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,684:0,22,255:21,0 chr1 26370794 . C . PASS END=26370805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:24,0 chr1 26370806 . A . PASS END=26370806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 26370807 . A . PASS END=26370808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,825:0,62,255:25,0 chr1 26370809 . T . PASS END=26370809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,824:0,47,255:25,0 chr1 26370810 . T . PASS END=26370814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,841:0,61,255:26,0 chr1 26370815 . G . PASS END=26370815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 26370816 . T . PASS END=26370816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 26370817 . C . PASS END=26370850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1031:0,80,255:35,0 chr1 26370851 . A . PASS END=26370851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1068:0,55,255:31,0 chr1 26370852 . A . PASS END=26370917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1141:0,80,255:37,0 chr1 26370918 . T . PASS END=26370925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 26370926 . A . PASS END=26370926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:24,0 chr1 26370927 . G . PASS END=26370935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:24,0 chr1 26371488 . C . PASS END=26371643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,87,255:40,0 chr1 26371644 . C . PASS END=26371654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr1 26371655 . C . PASS END=26371656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,855:0,75,255:19,0 chr1 26371657 . G . PASS END=26371681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:23,0 chr1 26371682 . T . PASS END=26371708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 26372338 . C . PASS END=26372339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 26372340 . G . PASS END=26372340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 26372341 . A . PASS END=26372343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 26372344 . G . PASS END=26372344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 26372345 . C . PASS END=26372346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 26372347 . G . PASS END=26372347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 26372348 . G . PASS END=26372351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 26372352 . G . PASS END=26372352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 26372353 . G . PASS END=26372365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 26372366 . G . PASS END=26372366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 26372367 . C . PASS END=26372367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26372368 . T . PASS END=26372369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 26372370 . C . PASS END=26372371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 26372372 . T . PASS END=26372372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 26372373 . C . PASS END=26372378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 26372379 . G . PASS END=26372381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:11,0 chr1 26372382 . C . PASS END=26372386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:27:15:0,27,405:0,29,255:9,0 chr1 26372387 . T . PASS END=26372387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:18:15:0,18,270:0,29,255:5,0 chr1 26378364 . T . PASS END=26378374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,118,1800:0,118,255:40,0 chr1 26380295 . C . PASS END=26380455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:65:0,120,1800:0,185,255:40,0 chr1 26383694 . C . PASS END=26383803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:35:0,81,1215:0,92,255:40,0 chr1 26383804 . G . PASS END=26383818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:64:27:0,64,850:0,64,255:25,0 chr1 26384119 . C . PASS END=26384141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,164,255:40,0 chr1 26384881 . C . PASS END=26384884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:17,0 chr1 26384885 . A . PASS END=26384885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 26384886 . G . PASS END=26384907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 26384908 . G . PASS END=26384988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,748:0,62,255:26,0 chr1 26384989 . G . PASS END=26384989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 26384990 . A . PASS END=26385000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 26385001 . T . PASS END=26385003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 26385004 . C . PASS END=26385034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 26385035 . T . PASS END=26385035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 26385036 . C . PASS END=26385054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,890:0,69,255:24,0 chr1 26385055 . G . PASS END=26385105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,44,255:19,0 chr1 26385106 . A . PASS END=26385114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 26386757 . C . PASS END=26386852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:41:0,85,1440:0,85,255:40,0 chr1 26387657 . C . PASS END=26387658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 26387659 . T . PASS END=26387659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr1 26387660 . T . PASS END=26387667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr1 26387668 . G . PASS END=26387674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1027:0,87,255:29,0 chr1 26387675 . A . PASS END=26387675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 26387676 . C . PASS END=26387811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1260:0,90,255:40,0 chr1 26387812 . T . PASS END=26387818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,77,255:26,0 chr1 26387819 . C . PASS END=26387819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26387820 . G . PASS END=26387825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr1 26392759 . C . PASS END=26392772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:17,0 chr1 26392773 . T . PASS END=26392773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:16,0 chr1 26392774 . T . PASS END=26392776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,690:0,44,255:19,0 chr1 26392777 . T . PASS END=26392780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 26392781 . T . PASS END=26392781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 26392782 . G . PASS END=26392782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 26392783 . T . PASS END=26392783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 26392784 . C . PASS END=26392786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 26392787 . T . PASS END=26392787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 26392788 . G . PASS END=26392789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 26392790 . T . PASS END=26392790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 26392791 . G . PASS END=26392803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 26392804 . A . PASS END=26392804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 26392805 . G . PASS END=26392805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26392806 . G . PASS END=26392806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 26392807 . T . PASS END=26392815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 26392816 . A . PASS END=26392831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,50,255:19,0 chr1 26392832 . G . PASS END=26392832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr1 26392833 . A . PASS END=26392884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 26392885 . G . PASS END=26392897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr1 26392898 . A . PASS END=26392909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 26392910 . T . PASS END=26392910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr1 26392911 . G . PASS END=26392920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 26392921 . G . PASS END=26392921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 26392922 . G . PASS END=26392931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,227:8,0 chr1 26393827 . C . PASS END=26393973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1150:0,83,255:40,0 chr1 26393974 . C . PASS END=26393985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:27:0,65,1080:0,65,255:26,0 chr1 26437861 . A . PASS END=26437891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 26437892 . G . PASS END=26437911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 26438374 . A . PASS END=26438389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr1 26438390 . G . PASS END=26438390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 26438391 . C . PASS END=26438391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 26438392 . A . PASS END=26438399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,535:0,31,255:13,0 chr1 26438400 . C . PASS END=26438406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 26440800 . A . PASS END=26441081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1211:0,86,255:40,0 chr1 26441082 . C . PASS END=26441084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:22,0 chr1 26448328 . C . PASS END=26448607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,116,1762:0,116,255:40,0 chr1 26448608 . C . PASS END=26448608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:64:50:0,64,1637:0,64,255:40,0 chr1 26448609 . T . PASS END=26449068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:34:0,85,1016:0,85,255:40,0 chr1 26487783 . A . LowGQ END=26487783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 26487784 . T . PASS END=26487797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:5,0 chr1 26487798 . C . PASS END=26487815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 26487816 . G . PASS END=26487839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 26487840 . A . PASS END=26487879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:14:0,40,476:0,40,255:19,0 chr1 26487880 . A . PASS END=26487893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 26487894 . C . PASS END=26487894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 26487895 . G . PASS END=26487895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 26487896 . A . PASS END=26487918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr1 26487919 . G . PASS END=26487938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 26487939 . C . PASS END=26487950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr1 26487951 . G . PASS END=26487956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,817:0,66,255:23,0 chr1 26487957 . G . PASS END=26487957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 26487958 . G . PASS END=26487970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,861:0,66,255:23,0 chr1 26487971 . G . PASS END=26487971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 26487972 . C . PASS END=26487972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26487973 . C . PASS END=26487973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 26487974 . C . PASS END=26488004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr1 26488005 . G . PASS END=26488005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:23,0 chr1 26488006 . G . PASS END=26488008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 26488009 . G . PASS END=26488009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:26,0 chr1 26488010 . G . PASS END=26488012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 26488013 . G . PASS END=26488028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:24:0,63,945:0,65,255:24,0 chr1 26488029 . T . PASS END=26488029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:19,0 chr1 26488030 . C . PASS END=26488030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 26488031 . C . PASS END=26488031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 26488032 . C . PASS END=26488032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 26488033 . T . PASS END=26488038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26488039 . T . PASS END=26488039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,668:0,11,255:18,0 chr1 26488040 . C . PASS END=26488040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26488041 . T . PASS END=26488041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 26488042 . A . PASS END=26488051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 26488052 . G . PASS END=26488052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 26488053 . C . PASS END=26488054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26488055 . G . PASS END=26488055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:19,0 chr1 26488056 . G . PASS END=26488057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26488058 . C . PASS END=26488058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 26488059 . T . PASS END=26488059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 26488060 . G . PASS END=26488062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26488063 . A . PASS END=26488064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 26488065 . G . PASS END=26488066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26488067 . T . PASS END=26488067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 26488068 . T . PASS END=26488071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26488072 . T . PASS END=26488072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 26488073 . G . PASS END=26488073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26488074 . A . PASS END=26488074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 26488075 . A . PASS END=26488085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr1 26488086 . G . PASS END=26488086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 26488087 . C . PASS END=26488087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 26488088 . C . PASS END=26488088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26488089 . A . PASS END=26488089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26488090 . A . PASS END=26488115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,613:0,40,255:18,0 chr1 26488116 . T . PASS END=26488116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 26488117 . T . PASS END=26488118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 26488119 . C . PASS END=26488120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 26488121 . G . PASS END=26488127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 26488128 . C . PASS END=26488128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 26488129 . C . PASS END=26488132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26488133 . G . PASS END=26488138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:12,0 chr1 26488139 . T . PASS END=26488139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 26488140 . G . PASS END=26488144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,42,255:11,0 chr1 26488145 . G . PASS END=26488145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:11,0 chr1 26488146 . A . PASS END=26488154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,459:0,36,255:13,0 chr1 26488155 . G . PASS END=26488155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 26488156 . C . PASS END=26488157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 26488158 . T . PASS END=26488158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 26488159 . C . PASS END=26488176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,519:0,42,255:17,0 chr1 26488177 . C . PASS END=26488178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 26488179 . T . PASS END=26488181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 26488182 . G . PASS END=26488183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 26488184 . G . PASS END=26488184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 26488185 . G . PASS END=26488185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 26488186 . G . PASS END=26488188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26488189 . G . PASS END=26488195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:14:0,35,585:0,35,255:13,0 chr1 26488196 . G . PASS END=26488196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,435:0,11,255:12,0 chr1 26488197 . C . PASS END=26488199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26488200 . C . PASS END=26488203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 26488204 . A . PASS END=26488204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 26488205 . T . PASS END=26488224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 26488225 . A . PASS END=26488225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 26488226 . G . PASS END=26488231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 26488232 . G . PASS END=26488235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 26488236 . T . PASS END=26488243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 26488244 . G . PASS END=26488244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 26488245 . T . PASS END=26488245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 26488246 . G . PASS END=26488257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 26488258 . T . PASS END=26488258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 26488259 . G . PASS END=26488311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 26488312 . A . PASS END=26488399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 26488400 . G . PASS END=26488402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 26488403 . C . PASS END=26488413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 26488414 . G . PASS END=26488428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,233:0,18,233:6,0 chr1 26488429 . G . PASS END=26488476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:3,0 chr1 26488477 . C . PASS END=26488503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:6,0 chr1 26488504 . C . PASS END=26488527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,182:0,21,182:8,0 chr1 26488528 . A . PASS END=26488528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 26488529 . C . PASS END=26488544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr1 26488545 . T . PASS END=26488547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 26488548 . C . PASS END=26488581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr1 26488582 . G . PASS END=26488582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 26488583 . C . PASS END=26488598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 26490652 . C . PASS END=26490658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 26490659 . C . PASS END=26490662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 26490663 . T . PASS END=26490663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 26490664 . G . PASS END=26490690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 26490691 . C . PASS END=26490692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 26490693 . G . PASS END=26490715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,213:9,0 chr1 26490716 . T . PASS END=26490716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 26490717 . T . PASS END=26490717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 26490718 . G . PASS END=26490718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 26490719 . A . PASS END=26490730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 26490731 . G . PASS END=26490731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 26490732 . G . PASS END=26490732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 26490733 . C . PASS END=26490741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 26490742 . C . PASS END=26490742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 26490743 . T . PASS END=26490747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 26490748 . C . PASS END=26490748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 26490749 . T . PASS END=26490750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 26490751 . G . PASS END=26490752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 26490753 . G . PASS END=26490764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 26490765 . C . PASS END=26490765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 26490766 . C . PASS END=26490781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 26490782 . T . PASS END=26490782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 26490783 . C . PASS END=26490786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 26490787 . G . PASS END=26490787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 26490788 . G . PASS END=26490804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr1 26490805 . C . PASS END=26490805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 26490806 . G . PASS END=26490807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 26490808 . A . PASS END=26490809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 26490810 . T . PASS END=26490810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:9,0 chr1 26490811 . G . PASS END=26490822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:8:0,24,310:0,24,255:8,0 chr1 26490823 . G . PASS END=26490823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 26490824 . C . PASS END=26490825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 26490826 . C . PASS END=26490833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 26490834 . A . PASS END=26490834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:4,0 chr1 26490835 . C . PASS END=26490835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 26490836 . G . PASS END=26490836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:4,0 chr1 26490837 . C . PASS END=26490873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,149:5,0 chr1 26490874 . C . LowGQ END=26490903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,39:3,0 chr1 26490904 . C . LowDepth;LowGQ END=26490946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 26492226 . T . PASS END=26492227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 26492228 . A . PASS END=26492228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,993:0,41,255:28,0 chr1 26492229 . G . PASS END=26492241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 26492242 . A . PASS END=26492243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,867:0,73,255:29,0 chr1 26492244 . C . PASS END=26492244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 26492245 . A . PASS END=26492245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 26492246 . G . PASS END=26492246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 26492247 . A . PASS END=26492248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 26492249 . G . PASS END=26492414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:32:0,84,1213:0,88,255:40,0 chr1 26492526 . C . PASS END=26492609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:40:0,102,1530:0,120,255:40,0 chr1 26494907 . C . PASS END=26494923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,157,255:40,0 chr1 26494924 . C . PASS END=26494990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:50:0,112,1800:0,112,255:40,0 chr1 26496475 . A . PASS END=26496484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 26496485 . C . PASS END=26496485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 26496486 . C . PASS END=26496493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 26496494 . C . PASS END=26496494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 26496495 . A . PASS END=26496495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 26496496 . G . PASS END=26496514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:24,0 chr1 26496515 . C . PASS END=26496517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 26496518 . T . PASS END=26496518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 26496519 . A . PASS END=26496527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:28,0 chr1 26496528 . G . PASS END=26496528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:27,0 chr1 26496529 . A . PASS END=26496529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 26496530 . T . PASS END=26496530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26496531 . G . PASS END=26496531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 26496532 . A . PASS END=26496538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr1 26496539 . A . PASS END=26496539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr1 26496540 . G . PASS END=26496543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 26496544 . C . PASS END=26496544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 26496545 . G . PASS END=26496547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 26496548 . G . PASS END=26496548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 26496549 . G . PASS END=26496549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 26496550 . C . PASS END=26496550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 26496551 . C . PASS END=26496562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1089:0,82,255:33,0 chr1 26496563 . A . PASS END=26496563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:29,0 chr1 26496564 . G . PASS END=26496576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1225:0,86,255:32,0 chr1 26496577 . C . PASS END=26496577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 26496578 . T . PASS END=26496596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1058:0,93,255:31,0 chr1 26496597 . A . PASS END=26496613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:25:0,69,1035:0,75,255:24,0 chr1 26496614 . C . PASS END=26496615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 26496616 . A . PASS END=26496616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:23,0 chr1 26496617 . A . PASS END=26496621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 26496622 . G . PASS END=26496622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 26496623 . A . PASS END=26496624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,917:0,72,255:25,0 chr1 26496625 . T . PASS END=26496625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 26496626 . T . PASS END=26496646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 26496647 . G . PASS END=26496647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 26496648 . C . PASS END=26496648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:17,0 chr1 26496649 . G . PASS END=26496650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 26496651 . T C, 49.87 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=2.493;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:5,3,0:7,8,0:47:85,0,47,185,185,185:255,0,255:8,0:4.9868e+01,8.8272e-05,5.0000e+01,1.8464e+02,2.1941e+02,1.8765e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,9,4,7:8,4,8,3 chr1 26496652 . C . PASS END=26496662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:40:19:0,40,599:0,40,255:17,0 chr1 26496663 . T . PASS END=26496663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:15,0 chr1 26496664 . C . PASS END=26496670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:16,0 chr1 26496671 . G . PASS END=26496674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 26496909 . G . PASS END=26497088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,105,1575:0,119,255:40,0 chr1 26497089 . C . PASS END=26497089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:34,0 chr1 26497090 . C . PASS END=26497143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1241:0,86,255:36,0 chr1 26497144 . C . PASS END=26497144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 26497145 . A . PASS END=26497160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 26497161 . C . PASS END=26497173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 26497174 . C . PASS END=26497174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:24,0 chr1 26497175 . A . PASS END=26497198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 26497199 . T . PASS END=26497207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 26497680 . T . PASS END=26497685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,764:0,69,255:23,0 chr1 26497686 . G . PASS END=26497686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 26497687 . G . PASS END=26497692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:25,0 chr1 26497693 . G . PASS END=26497693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,803:0,36,255:24,0 chr1 26497694 . G . PASS END=26497696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 26497697 . C . PASS END=26497699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 26497700 . G . PASS END=26497704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 26497705 . T . PASS END=26497705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:25,0 chr1 26497706 . G . PASS END=26497707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1024:0,71,255:26,0 chr1 26497708 . C . PASS END=26497710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26497711 . A . PASS END=26497711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 26497712 . C . PASS END=26497714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:30,0 chr1 26497715 . T . PASS END=26497715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 26497716 . C . PASS END=26497722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1172:0,93,255:32,0 chr1 26497723 . A . PASS END=26497724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:32:0,60,1111:0,60,255:32,0 chr1 26497725 . G . PASS END=26497826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1174:0,81,255:40,0 chr1 26498108 . C . PASS END=26498152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1402:0,87,255:40,0 chr1 26504039 . A . PASS END=26504050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1303:0,95,255:39,0 chr1 26504051 . G . PASS END=26504051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:36,0 chr1 26504052 . A . PASS END=26504084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1225:0,86,255:38,0 chr1 26504085 . T . PASS END=26504085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:28,0 chr1 26504086 . G . PASS END=26504090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1231:0,86,255:30,0 chr1 26506944 . G . PASS END=26506947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 26506948 . T . PASS END=26506948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:16,0 chr1 26506949 . G . PASS END=26506954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:19,0 chr1 26506955 . T . PASS END=26506955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 26506956 . C . PASS END=26506994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,678:0,60,255:26,0 chr1 26506995 . G . PASS END=26507032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1072:0,87,255:31,0 chr1 26507033 . G . PASS END=26507033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 26507034 . C . PASS END=26507034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 26507035 . T . PASS END=26507035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:27,0 chr1 26507036 . C . PASS END=26507038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 26507039 . G . PASS END=26507085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,68,255:26,0 chr1 26507086 . A . PASS END=26507089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,72,255:19,0 chr1 26507090 . C . PASS END=26507093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 26507094 . A . PASS END=26507101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:49:22:0,49,715:0,49,255:19,0 chr1 26507206 . A . PASS END=26507251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,901:0,75,255:26,0 chr1 26507252 . T . PASS END=26507259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 26507260 . G . PASS END=26507264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 26507265 . C . PASS END=26507274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1015:0,81,255:27,0 chr1 26507275 . C . PASS END=26507285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,990:0,63,255:26,0 chr1 26507286 . C . PASS END=26507319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1062:0,84,255:31,0 chr1 26507320 . A . PASS END=26507322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 26507323 . G . PASS END=26507323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 26507324 . A . PASS END=26507358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,892:0,72,255:26,0 chr1 26507359 . G . PASS END=26507387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 26508348 . G . PASS END=26508387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1706:0,120,255:40,0 chr1 26508388 . G . PASS END=26508388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1670:0,73,255:40,0 chr1 26508389 . A . PASS END=26508432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:41:0,85,1440:0,85,255:40,0 chr1 26508852 . G . PASS END=26508854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 26508855 . G . PASS END=26508855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 26508856 . G . PASS END=26508856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26508857 . T . PASS END=26508857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 26508858 . C . PASS END=26508861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 26508862 . C . PASS END=26508862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 26508863 . G . PASS END=26508863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26508864 . G . PASS END=26508866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:26,0 chr1 26508867 . G . PASS END=26508869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 26508870 . A . PASS END=26508870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:26,0 chr1 26508871 . A . PASS END=26508873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 26508874 . A . PASS END=26508874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:28,0 chr1 26508875 . G . PASS END=26508878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 26508879 . A . PASS END=26508893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:25,0 chr1 26508971 . T . PASS END=26508974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26508975 . G . PASS END=26508975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 26508976 . C . PASS END=26508979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:29,0 chr1 26508980 . G . PASS END=26508980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:28,0 chr1 26508981 . T . PASS END=26509065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1147:0,80,255:34,0 chr1 26509066 . C . PASS END=26509075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:24,0 chr1 26509688 . G . PASS END=26509696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 26509697 . A . PASS END=26509697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 26509698 . T . PASS END=26509709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 26509710 . G . PASS END=26509710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 26509711 . C . PASS END=26509739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:24,0 chr1 26509740 . A . PASS END=26509740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 26509741 . C . PASS END=26509747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 26509837 . G . PASS END=26509842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1008:0,78,255:26,0 chr1 26509843 . A . PASS END=26509926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1182:0,84,255:40,0 chr1 26510220 . G . PASS END=26510238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:23,0 chr1 26510239 . A . PASS END=26510239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 26510240 . C . PASS END=26510258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:22,0 chr1 26510259 . C . PASS END=26510274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:23,0 chr1 26510275 . T . PASS END=26510277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 26510278 . G . PASS END=26510280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 26510281 . T . PASS END=26510294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 26510295 . A . PASS END=26510295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,568:0,26,255:16,0 chr1 26510296 . T . PASS END=26510298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:17,0 chr1 26510299 . C . PASS END=26510300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 26510301 . A . PASS END=26510301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:27:19:0,27,405:0,57,255:9,0 chr1 26510302 . T . PASS END=26510309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:19:0,30,450:0,57,255:10,0 chr1 26510310 . A . LowGQ END=26510320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:14:0,0,202:5,0,255:10,0 chr1 26510321 . G . PASS END=26510321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:15:14:0,15,225:0,42,255:5,0 chr1 26510562 . A . LowGQ END=26510563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:0,0,186:6,0 chr1 26510564 . G . PASS END=26510564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr1 26510565 . C . PASS END=26510565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 26510566 . C . PASS END=26510566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 26510567 . C . PASS END=26510569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 26510570 . T . LowGQ END=26510571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,177:0,0,209:7,0 chr1 26510572 . A . PASS END=26510573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 26510574 . G . LowGQ END=26510575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:9,0 chr1 26510576 . C . PASS END=26510603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 26510604 . T . PASS END=26510611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:10,0 chr1 26510612 . T . PASS END=26510625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr1 26510626 . C . PASS END=26510628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 26510629 . C . PASS END=26510661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,280:0,24,255:9,0 chr1 26510662 . T . PASS END=26510666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 26510667 . A . PASS END=26510667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr1 26510668 . G . PASS END=26510680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 26510681 . T . PASS END=26510681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 26510682 . C . PASS END=26510682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 26510683 . T . PASS END=26510698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 26510699 . C . PASS END=26510702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 26510703 . A . PASS END=26510703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 26510704 . G . PASS END=26510711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 26510712 . T . PASS END=26510712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 26510713 . C . PASS END=26510717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 26510718 . G . PASS END=26510778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,364:0,30,255:12,0 chr1 26510892 . A . PASS END=26510895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 26510896 . T . PASS END=26510901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 26510902 . C . PASS END=26510910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,620:0,45,255:16,0 chr1 26510911 . T . PASS END=26510911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 26510912 . G . PASS END=26510948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:18,0 chr1 26510949 . T . PASS END=26510949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:16,0 chr1 26510950 . C . PASS END=26510962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:18,0 chr1 26510963 . G . PASS END=26510963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 26510964 . C . PASS END=26510998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,654:0,54,255:19,0 chr1 26511076 . A . PASS END=26511090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 26511091 . A . PASS END=26511091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:21,0 chr1 26511092 . A . PASS END=26511094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,803:0,72,255:24,0 chr1 26511095 . A . PASS END=26511095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 26511096 . A . PASS END=26511098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,908:0,72,255:24,0 chr1 26511099 . A . PASS END=26511099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 26511100 . A . PASS END=26511103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 26511505 . G . PASS END=26511564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,847:0,69,255:26,0 chr1 26511565 . G . PASS END=26511587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 26511588 . A . PASS END=26511598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 26511599 . C . PASS END=26511599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 26511600 . G . PASS END=26511644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 26511645 . G . PASS END=26511672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,630:0,41,255:19,0 chr1 26511673 . C . PASS END=26511677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,540:0,35,255:12,0 chr1 26513659 . G . PASS END=26513683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,984:0,86,255:33,0 chr1 26513684 . A . PASS END=26513684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:32,0 chr1 26513685 . T . PASS END=26513732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1195:0,88,255:36,0 chr1 26513902 . T . PASS END=26513973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,103,1575:0,103,255:40,0 chr1 26514725 . G . PASS END=26514776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1256:0,92,255:35,0 chr1 26514777 . G . PASS END=26514777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,2 chr1 26514778 . C . PASS END=26514779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:30:33:0,30,1110:0,30,255:31,2 chr1 26514780 . C . PASS END=26514792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:33,0 chr1 26514793 . A . PASS END=26514793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:29,0 chr1 26514794 . G . PASS END=26514798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1166:0,88,255:35,0 chr1 26514933 . A . PASS END=26514933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 26514934 . C . PASS END=26514948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,1008:0,63,255:26,0 chr1 26514949 . C . PASS END=26514956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26514957 . A . PASS END=26514972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:24,0 chr1 26514973 . G . PASS END=26514973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,660:0,22,255:19,0 chr1 26514974 . G . PASS END=26514981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 26514982 . C . PASS END=26514984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 26514985 . C . PASS END=26514989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 26514990 . C . PASS END=26514994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 26515089 . C . PASS END=26515140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,590:0,48,255:19,0 chr1 26515141 . C . PASS END=26515143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 26515144 . C . PASS END=26515188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 26515263 . A . PASS END=26515291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,584:0,41,255:19,0 chr1 26515292 . G . PASS END=26515292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26515293 . T . PASS END=26515293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:20,0 chr1 26515294 . A . PASS END=26515298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 26515299 . G . PASS END=26515299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 26515300 . G . PASS END=26515328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 26515329 . G . PASS END=26515330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 26515331 . C . PASS END=26515333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 26515334 . C . PASS END=26515334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 26515335 . C . PASS END=26515335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 26515336 . A . PASS END=26515336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 26515337 . C . PASS END=26515354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 26515355 . C . PASS END=26515355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 26515356 . A . PASS END=26515378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 26515379 . C . PASS END=26515382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26515383 . A . PASS END=26515391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 26515392 . C . PASS END=26515392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 26515393 . T . PASS END=26515398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 26515399 . C . PASS END=26515401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 26515402 . T . PASS END=26515407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26515408 . A . PASS END=26515418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 26515419 . T . PASS END=26515419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:15,0 chr1 26515420 . G . PASS END=26515435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,630:0,41,255:18,0 chr1 26515436 . A . PASS END=26515436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:13,0 chr1 26515437 . C . PASS END=26515442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 26515443 . A . PASS END=26515443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 26515444 . G . PASS END=26515444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26515770 . G . PASS END=26515782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:16,0 chr1 26515783 . A . PASS END=26515783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 26515784 . G . PASS END=26515790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 26515791 . G . PASS END=26515792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 26515793 . C . PASS END=26515794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:16,0 chr1 26515795 . T . PASS END=26515795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:15,0 chr1 26515796 . A . PASS END=26515807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,537:0,41,255:18,0 chr1 26515808 . G . PASS END=26515808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 26515809 . G . PASS END=26515812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 26515813 . A . PASS END=26515815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26515816 . C . PASS END=26515817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 26515818 . G . PASS END=26515821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26515822 . T . PASS END=26515822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:19,0 chr1 26515823 . G . PASS END=26515826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26515827 . G . PASS END=26515827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 26515828 . G . PASS END=26515829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26515830 . G . PASS END=26515830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 26515831 . A . PASS END=26515839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 26515840 . G . PASS END=26515840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 26515841 . C . PASS END=26515948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,792:0,62,255:25,0 chr1 26515949 . G . PASS END=26515952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 26515953 . C . PASS END=26515962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 26515963 . T . PASS END=26515963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr1 26515964 . G . PASS END=26515982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:21,0 chr1 26515983 . C . PASS END=26516012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 26516013 . A . PASS END=26516013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 26516014 . G . PASS END=26516019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 26516020 . T . PASS END=26516020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 26516021 . C . PASS END=26516021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 26516022 . C . PASS END=26516036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 26516037 . T . PASS END=26516039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:8,0 chr1 26517119 . A . PASS END=26517120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 26517121 . G . PASS END=26517121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 26517122 . A . PASS END=26517122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 26517123 . G . PASS END=26517123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 26517124 . G . PASS END=26517125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 26517126 . A . PASS END=26517127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 26517128 . A . PASS END=26517128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 26517129 . A . PASS END=26517129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:15,0 chr1 26517130 . T . PASS END=26517147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 26517148 . G . PASS END=26517148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 26517149 . C . PASS END=26517152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26517153 . G . PASS END=26517153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 26517154 . G . PASS END=26517165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,615:0,40,255:18,0 chr1 26517166 . A . PASS END=26517166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:15,0 chr1 26517167 . G . PASS END=26517168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 26517169 . C . PASS END=26517169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 26517170 . C . PASS END=26517170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:16,0 chr1 26517171 . T . PASS END=26517182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:17,0 chr1 26517183 . G . PASS END=26517183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 26517184 . C . PASS END=26517196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 26517197 . G . PASS END=26517199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 26517200 . C . PASS END=26517200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 26517201 . G . PASS END=26517201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 26517202 . T . PASS END=26517202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 26517203 . A . PASS END=26517229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,884:0,61,255:23,0 chr1 26517230 . C . PASS END=26517237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:25,0 chr1 26517238 . C . PASS END=26517238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 26517239 . C . PASS END=26517248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,925:0,75,255:25,0 chr1 26517249 . C . PASS END=26517249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 26517250 . C . PASS END=26517251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 26517252 . T . PASS END=26517252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 26517253 . G . PASS END=26517258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:23,0 chr1 26517259 . T . PASS END=26517259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 26517260 . A . PASS END=26517261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 26517262 . C . PASS END=26517262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 26517263 . A . PASS END=26517263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 26517264 . T . PASS END=26517264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,715:0,42,255:21,0 chr1 26517265 . T . PASS END=26517266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 26517267 . A G, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=3.855;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,15,0:0.600,0.000:25:5,8,0:5,7,0:47:85,0,48,536,350,886:255,0,255:9,0:5.0000e+01,7.9471e-05,5.0813e+01,4.5000e+02,3.8448e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,5,10:8,2,8,7 chr1 26517268 . C . PASS END=26517292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,945:0,65,255:25,0 chr1 26517293 . C . PASS END=26517293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 26517294 . A . PASS END=26517304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 26517305 . A . PASS END=26517305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26517306 . A . PASS END=26517306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 26517307 . C . PASS END=26517321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 26517322 . G . PASS END=26517322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 26517323 . A . PASS END=26517323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 26517324 . A . PASS END=26517324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:19,0 chr1 26517325 . C . PASS END=26517328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 26517329 . G . PASS END=26517331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 26517778 . G . PASS END=26517778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 26517779 . A . PASS END=26517779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 26517780 . C . PASS END=26517780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 26517781 . G . PASS END=26517784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 26517785 . G . PASS END=26517785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 26517786 . G . PASS END=26517793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 26517794 . A G, 49.61 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=3.923;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,10,0:0.455,0.000:22:8,7,0:4,3,0:48:84,0,50,350,429,779:255,0,255:12,0:4.9605e+01,6.9375e-05,5.3000e+01,3.4965e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,5,5:6,6,6,4:26517773 chr1 26517795 . G . PASS END=26517809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:26,0 chr1 26517810 . C . PASS END=26517831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:32:0,83,1158:0,83,255:38,0 chr1 26517832 . C . PASS END=26517853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,107,1480:0,107,255:40,0 chr1 26517854 . T . PASS END=26517890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,114,1710:0,123,255:40,0 chr1 26517891 . C T, 48.04 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=2.900;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,17,0:0.425,0.000:40:11,13,0:12,4,0:47:83,0,50,608,823,1431:255,0,255:23,0:4.8041e+01,8.9825e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,14,9,8:9,14,11,6 chr1 26517892 . G . PASS END=26517921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1247:0,86,255:35,0 chr1 26520278 . A . PASS END=26520379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:40:0,95,1318:0,95,255:40,0 chr1 26524177 . G . PASS END=26524274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:37:0,84,1260:0,91,255:40,0 chr1 26524448 . G . PASS END=26524458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:22,0 chr1 26524459 . T . PASS END=26524469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,915:0,75,255:25,0 chr1 26524470 . T . PASS END=26524470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 26524471 . G . PASS END=26524484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,909:0,75,255:26,0 chr1 26524485 . C . PASS END=26524485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 26524486 . C . PASS END=26524489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26524490 . C . PASS END=26524490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26524491 . G . PASS END=26524547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,832:0,61,255:26,0 chr1 26524548 . C . PASS END=26524548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:22,0 chr1 26524549 . T . PASS END=26524549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:23,0 chr1 26524550 . C . PASS END=26524550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 26524551 . A . PASS END=26524551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 26524552 . T . PASS END=26524554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26524555 . T . PASS END=26524558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 26524559 . C . PASS END=26524562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 26524563 . A . PASS END=26524568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr1 26524777 . G . PASS END=26524897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:33:0,83,1172:0,83,255:40,0 chr1 26524898 . A . PASS END=26524910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,80,255:25,0 chr1 26525117 . A . PASS END=26525133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:21:0,61,770:0,61,255:26,0 chr1 26525134 . G . PASS END=26525157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:32,0 chr1 26525158 . C . PASS END=26525158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:31,0 chr1 26525159 . T . PASS END=26525345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:32:0,93,1395:0,96,255:40,0 chr1 26525346 . T . PASS END=26525380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:42:0,98,1333:0,98,255:40,0 chr1 26525381 . T . PASS END=26525381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1397:0,74,255:38,0 chr1 26525382 . A . PASS END=26525382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 26525383 . T C, 50.00 PASS DP=43;MQ=247.47;MQRankSum=5.600;ReadPosRankSum=2.588;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,22,0:0.512,0.000:43:9,12,0:12,10,0:48:85,0,50,786,690,1476:255,0,255:20,0:5.0000e+01,6.5492e-05,5.2934e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,15,3,19:12,9,9,13 chr1 26525384 . T . PASS END=26525405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1395:0,107,255:40,0 chr1 26526375 . G . PASS END=26526385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,112,1394:0,112,255:40,0 chr1 26526386 . G . PASS END=26526401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,120,1800:0,124,255:40,0 chr1 26526402 . G . PASS END=26526438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,112,1713:0,112,255:40,0 chr1 26526439 . A G, 50.00 PASS DP=66;MQ=249.94;MQRankSum=6.550;ReadPosRankSum=-0.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,37,0:0.561,0.000:66:13,20,0:16,17,0:48:85,0,49,1316,972,2287:255,0,255:28,0:5.0000e+01,7.3517e-05,5.1598e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,10,17,20:13,16,18,19 chr1 26526440 . T . PASS END=26526476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,164,255:40,0 chr1 26526477 . G . PASS END=26526549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:50:0,120,1800:0,133,255:40,0 chr1 26527321 . A . PASS END=26527327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 26527328 . C . PASS END=26527328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,725:0,38,255:21,0 chr1 26527329 . A . PASS END=26527332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,901:0,69,255:26,0 chr1 26527333 . G . PASS END=26527339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:31,0 chr1 26527340 . A . PASS END=26527340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 26527341 . G . PASS END=26527344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr1 26527345 . A . PASS END=26527345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1068:0,77,255:30,0 chr1 26527346 . A . PASS END=26527495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:31:0,80,1074:0,80,255:38,0 chr1 26527496 . T . PASS END=26527496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1021:0,62,255:28,0 chr1 26527497 . G . PASS END=26527500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26527501 . C . PASS END=26527506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:30:0,66,990:0,73,255:23,0 chr1 26527507 . A . PASS END=26527507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:21,0 chr1 26527508 . A . PASS END=26527509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:21,0 chr1 26527510 . G . PASS END=26527510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:20,0 chr1 26527511 . A . PASS END=26527511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,900:0,74,255:20,0 chr1 26527512 . G . PASS END=26527512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr1 26527513 . A . PASS END=26527518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 26527519 . G . PASS END=26527519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 26527520 . A . PASS END=26527528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 26527529 . A . PASS END=26527530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 26527531 . A . PASS END=26527531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,731:0,30,255:19,0 chr1 26527532 . T . PASS END=26527536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 26527845 . G . PASS END=26527845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 26527846 . A . PASS END=26527846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,545:0,27,255:18,0 chr1 26527847 . T . PASS END=26527851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26527852 . G . PASS END=26527852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26527853 . A . PASS END=26527854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr1 26527855 . G . PASS END=26527855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:20,0 chr1 26527856 . A . PASS END=26527857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,715:0,49,255:22,0 chr1 26527858 . G . PASS END=26527863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 26527864 . G . PASS END=26527864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 26527865 . C . PASS END=26527866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 26527867 . A . PASS END=26527868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 26527869 . C . PASS END=26527869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 26527870 . C . PASS END=26527870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 26527871 . G . PASS END=26527872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 26527873 . T . PASS END=26527873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 26527874 . T . PASS END=26527875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26527876 . A . PASS END=26527876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 26527877 . A . PASS END=26527879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 26527880 . A . PASS END=26527880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:20,0 chr1 26527881 . G . PASS END=26527884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 26527885 . C . PASS END=26527885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:18,0 chr1 26527886 . A . PASS END=26527886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,629:0,19,255:16,0 chr1 26527887 . G . PASS END=26527888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,767:0,50,255:20,0 chr1 26527889 . A . PASS END=26527889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,787:0,25,255:20,0 chr1 26527890 . G . PASS END=26527890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 26527891 . T . PASS END=26527893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:22,0 chr1 26527894 . G . PASS END=26527894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 26527895 . A . PASS END=26527895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,776:0,28,255:19,0 chr1 26527896 . G . PASS END=26527898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 26527899 . G . PASS END=26527899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 26527900 . T . PASS END=26527905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 26527906 . A . PASS END=26527906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 26527907 . G . PASS END=26527914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr1 26527915 . T . PASS END=26527915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:20,0 chr1 26527916 . C . PASS END=26527921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 26527922 . G . PASS END=26527922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,732:0,33,255:21,0 chr1 26527923 . C . PASS END=26527930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 26527931 . T . PASS END=26527931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 26527932 . G . PASS END=26527940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 26527941 . G . PASS END=26527942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,746:0,52,255:20,0 chr1 26527943 . C . PASS END=26527944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 26527945 . T . PASS END=26527946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:22,0 chr1 26527947 . C . PASS END=26527949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 26527950 . G . PASS END=26527950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 26527951 . G . PASS END=26527953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 26527954 . A . PASS END=26527956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:21,0 chr1 26527957 . C . PASS END=26527959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26527960 . C . PASS END=26527960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 26527961 . A . PASS END=26527963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26527964 . T . PASS END=26527964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 26527965 . G . PASS END=26527965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 26527966 . T . PASS END=26527966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,799:0,45,255:22,0 chr1 26527967 . C . PASS END=26527982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr1 26527983 . G . PASS END=26527992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,974:0,84,255:28,0 chr1 26527993 . C . PASS END=26528024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,962:0,78,255:26,0 chr1 26528025 . T . PASS END=26528026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 26528027 . C . PASS END=26528029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 26528030 . C . PASS END=26528030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 26528031 . C . PASS END=26528065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:25,0 chr1 26528066 . A . PASS END=26528094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,668:0,44,255:19,0 chr1 26528980 . G . PASS END=26529033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:47:0,101,1730:0,101,255:40,0 chr1 26566275 . A . PASS END=26566328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1134:0,85,255:35,0 chr1 26566329 . A . PASS END=26566329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 26570657 . G . PASS END=26570795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:33:0,87,1294:0,88,255:40,0 chr1 26570796 . A . PASS END=26570796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:29,0 chr1 26570797 . G . PASS END=26570805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 26570806 . G . PASS END=26570809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 26581662 . A . PASS END=26582077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1144:0,89,255:40,0 chr1 26582078 . A . PASS END=26582078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:31,0 chr1 26582079 . A . PASS END=26582100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:89:35:0,89,1271:0,89,255:34,0 chr1 26582101 . G . PASS END=26582103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:38:0,72,1080:0,98,255:26,0 chr1 26582104 . G . PASS END=26582104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 26582105 . T . PASS END=26582106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:36:0,78,1170:0,94,255:26,0 chr1 26582107 . G . PASS END=26582111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:36:0,84,1260:0,98,255:28,0 chr1 26582112 . G . PASS END=26582112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:27,0 chr1 26582113 . A . PASS END=26582119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 26582120 . C . PASS END=26582120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 26582121 . C . PASS END=26582128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 26582129 . A . PASS END=26582129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 26582130 . A . PASS END=26582132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26582133 . A . PASS END=26582133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 26582134 . G . PASS END=26582137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 26582138 . C . PASS END=26582138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 26582139 . C . PASS END=26582139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 26582140 . G . PASS END=26582145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 26582146 . C . PASS END=26582150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 26582151 . C . PASS END=26582151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 26582152 . A . PASS END=26582162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,975:0,84,255:29,0 chr1 26582163 . G . PASS END=26582163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 26582164 . G . PASS END=26582181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:29,0 chr1 26582182 . T . PASS END=26582183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 26582184 . G . PASS END=26582184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26582185 . C . PASS END=26582186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 26582187 . G . PASS END=26582188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 26582189 . G . PASS END=26582191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 26582192 . G . PASS END=26582194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26582195 . C . PASS END=26582248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,886:0,69,255:25,0 chr1 26582249 . G . PASS END=26582249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 26582250 . T . PASS END=26582256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 26582257 . G . PASS END=26582257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 26582258 . C . PASS END=26582260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26582261 . A . PASS END=26582262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:19,0 chr1 26582263 . T . PASS END=26582271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 26582272 . T . PASS END=26582272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 26582273 . T . PASS END=26582276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26582277 . A . PASS END=26582277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 26582278 . T . PASS END=26582287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr1 26582288 . C . PASS END=26582288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 26582289 . A . PASS END=26582289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26582290 . A . PASS END=26582291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 26582292 . C . PASS END=26582292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26582293 . T . PASS END=26582307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,637:0,40,255:19,0 chr1 26582308 . T . PASS END=26582308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:17,0 chr1 26582309 . T . PASS END=26582312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 26582313 . G . PASS END=26582313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 26582314 . G . PASS END=26582315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 26582316 . A . PASS END=26582316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 26582317 . G . PASS END=26582330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:16,0 chr1 26582331 . T . PASS END=26582341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 26582342 . A . PASS END=26582342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 26582343 . T . PASS END=26582351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 26582352 . T . PASS END=26582352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 26582353 . G . PASS END=26582356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 26584088 . C . PASS END=26584221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,101,1406:0,101,255:40,0 chr1 26584634 . G . PASS END=26584647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:31:0,92,1164:0,92,255:37,0 chr1 26584648 . T . PASS END=26584648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:35,0 chr1 26584649 . C . PASS END=26584745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1122:0,83,255:40,0 chr1 26584746 . C . PASS END=26584751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:25,0 chr1 26586108 . G . PASS END=26586124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:26,0 chr1 26586125 . C . PASS END=26586245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,1015:0,81,255:40,0 chr1 26586246 . G . PASS END=26586246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1261:0,79,255:35,0 chr1 26586247 . T . PASS END=26586254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:40:0,89,1332:0,89,255:38,0 chr1 26586255 . C . PASS END=26586255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1260:0,64,255:36,0 chr1 26586256 . A . PASS END=26586257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 26586258 . A . PASS END=26586258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:50:40:0,50,1217:0,50,255:37,0 chr1 26586259 . A . PASS END=26586275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1215:0,95,255:38,0 chr1 26586276 . A . PASS END=26586276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:30,0 chr1 26586277 . A . PASS END=26586293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:30,0 chr1 26594974 . G . PASS END=26595119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:33:0,81,1172:0,83,255:40,0 chr1 26595120 . C . PASS END=26595123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,83,255:25,0 chr1 26595124 . C . PASS END=26595126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 26595951 . C . PASS END=26595957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 26595958 . A . PASS END=26595958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26595959 . T . PASS END=26595959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 26595960 . T . PASS END=26595969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1094:0,84,255:36,0 chr1 26595970 . A . PASS END=26595970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:35,0 chr1 26595971 . G . PASS END=26596042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,101,1334:0,101,255:40,0 chr1 26596043 . G . PASS END=26596079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,107,1512:0,107,255:40,0 chr1 26596080 . G A, 48.04 PASS DP=41;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=4.295;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,17,0:0.425,0.000:40:12,6,0:11,11,0:47:83,0,50,608,807,1415:255,0,255:19,0:4.8042e+01,8.9825e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,15,5,12:13,10,12,5 chr1 26596081 . C . PASS END=26596105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,92,255:37,0 chr1 26597505 . C . PASS END=26597512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:32,0 chr1 26597513 . A . PASS END=26597513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 26597514 . T . PASS END=26597598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1114:0,84,255:40,0 chr1 26598512 . A . PASS END=26598562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:37:0,90,1350:0,111,255:40,0 chr1 26601025 . A . PASS END=26601087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:59:0,120,1800:0,145,255:40,0 chr1 26601455 . A . PASS END=26601532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:35:0,94,1260:0,94,255:39,0 chr1 26601533 . C . PASS END=26601539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,92,255:33,0 chr1 26601540 . A . PASS END=26601540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:29,0 chr1 26601541 . G . PASS END=26601541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 26601542 . C . PASS END=26601542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:29,0 chr1 26601543 . T . PASS END=26601548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr1 26601549 . C . PASS END=26601562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:24:0,63,945:0,72,255:24,0 chr1 26603026 . C . PASS END=26603030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 26603031 . A . PASS END=26603031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 26603032 . G . PASS END=26603037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 26603038 . A . PASS END=26603044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,828:0,80,255:28,0 chr1 26603045 . A . PASS END=26603045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 26603046 . C . PASS END=26603046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26603047 . T . PASS END=26603047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 26603048 . T . PASS END=26603056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1058:0,87,255:31,0 chr1 26603057 . A . PASS END=26603057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 26603058 . G . PASS END=26603089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:31:0,92,1087:0,92,255:35,0 chr1 26603090 . C . PASS END=26603090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 26603091 . C . PASS END=26603210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,84,255:40,0 chr1 26603211 . G . PASS END=26603245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,868:0,61,255:26,0 chr1 26603246 . T . PASS END=26603251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 26603624 . C . PASS END=26603645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1078:0,84,255:37,0 chr1 26603646 . G . PASS END=26603646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 26603647 . C . PASS END=26603766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1215:0,93,255:40,0 chr1 26603767 . A . PASS END=26603769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 26603770 . T . PASS END=26603776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:19,0 chr1 26603777 . C . PASS END=26603778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 26603779 . C . PASS END=26603784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:21:0,57,855:0,63,255:19,0 chr1 26606647 . A . PASS END=26606680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 26606681 . C . PASS END=26606681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 26606682 . C . PASS END=26606685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26606686 . T . PASS END=26606686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 26606687 . C . PASS END=26606690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26606691 . C . PASS END=26606694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 26607256 . A . PASS END=26607259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 26607260 . A . PASS END=26607260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 26607261 . G . PASS END=26607261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 26607262 . T . PASS END=26607270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr1 26607271 . A . PASS END=26607271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 26607272 . G . PASS END=26607273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:31,0 chr1 26607274 . G . PASS END=26607274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 26607275 . A . PASS END=26607276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 26607277 . G . PASS END=26607277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 26607278 . T . PASS END=26607295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:34,0 chr1 26607296 . G . PASS END=26607296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:31,0 chr1 26607297 . G . PASS END=26607306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:33,0 chr1 26607307 . C . PASS END=26607307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:31,0 chr1 26607308 . A . PASS END=26607348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:33,0 chr1 26607349 . G . PASS END=26607349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:28,0 chr1 26607350 . A . PASS END=26607363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr1 26607364 . T . PASS END=26607364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 26607365 . T . PASS END=26607365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 26607366 . G . PASS END=26607366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 26607367 . G . PASS END=26607367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 26607368 . C . PASS END=26607370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 26607371 . G . PASS END=26607394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,833:0,72,255:27,0 chr1 26607395 . A . PASS END=26607395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 26607396 . G . PASS END=26607396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 26607397 . A . PASS END=26607397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr1 26607398 . T . PASS END=26607402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,801:0,72,255:24,0 chr1 26607403 . A . PASS END=26607403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,829:0,41,255:19,0 chr1 26607404 . A . PASS END=26607405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 26607406 . G . PASS END=26607408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:19,0 chr1 26607409 . G . PASS END=26607411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:20,0 chr1 26607412 . C . PASS END=26607413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,715:0,49,255:19,0 chr1 26607414 . G . PASS END=26607415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26607416 . A . PASS END=26607416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 26607417 . C . PASS END=26607417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,626:0,24,255:19,0 chr1 26607418 . T . PASS END=26607418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 26607419 . G . PASS END=26607422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 26607423 . G . PASS END=26607424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 26607425 . T . PASS END=26607425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26607426 . A . PASS END=26607426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,637:0,30,255:18,0 chr1 26607427 . T . PASS END=26607427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:18,0 chr1 26607428 . G . PASS END=26607438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,631:0,46,255:19,0 chr1 26607439 . C . PASS END=26607439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:7:21:0,7,584:0,7,255:16,0 chr1 26607440 . G . PASS END=26607455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:20:0,49,723:0,49,255:19,0 chr1 26607456 . T . PASS END=26607456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,668:0,33,255:17,0 chr1 26607457 . G . PASS END=26607474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 26607549 . G . PASS END=26607552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 26607553 . A . PASS END=26607582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:22,0 chr1 26607583 . A . PASS END=26607611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 26607612 . T . PASS END=26607612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 26607613 . G . PASS END=26607613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:13,0 chr1 26607614 . A . PASS END=26607614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 26608790 . T . PASS END=26608791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 26608792 . A . PASS END=26608792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 26608793 . T . PASS END=26608813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 26608814 . A G, 68.14 PASS DP=7;MQ=243.25;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,7,0:1.000,0.000:7:0,3,0:0,4,0:18:106,21,0,271,21,271:255,21,0:0,0:6.8135e+01,1.8135e+01,6.7261e-02,2.6811e+02,5.2905e+01,2.7111e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,1:0,0,4,3:26608769 chr1 26608815 . G . PASS END=26608818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,247:0,21,247:7,0 chr1 26608819 . A . PASS END=26608822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr1 26608823 . A . LowGQ END=26608847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:9,2:11:0:7:0,0,0:0,0,161:3,2 chr1 26608848 . CTGGGGCCGGG C, 6.32 DRAGENIndelHardQUAL DP=12;MQ=237.02;MQRankSum=0.537;ReadPosRankSum=2.041;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,2,0:0.167,0.000:12:5,1,0:5,1,0:6:34,0,50,64,415,479:33,0,255:1,2:6.3165e+00,1.1551e+00,5.4155e+01,7.1188e+01,4.4853e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:6,4,2,0:3,7,1,1:26608769 chr1 26608849 . T . LowGQ END=26608858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,5:13:0:12:0,0,0:33,0,193:0,7 chr1 26608859 . ACCGGGACC A, 5.85 DRAGENIndelHardQUAL DP=12;MQ=237.02;MQRankSum=0.537;ReadPosRankSum=0.752;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,2,0:0.167,0.000:12:5,1,0:5,1,0:6:34,0,50,64,415,479:135,0,255:0,5:5.8531e+00,1.3067e+00,5.4307e+01,7.0725e+01,4.4853e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:6,4,2,0:3,7,1,1:26608769 chr1 26608860 . C . LowGQ END=26608864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,5:13:0:13:0,0,0:135,0,249:0,5 chr1 26608865 . ACC A, 50.00 PASS DP=12;MQ=237.02;MQRankSum=0.537;ReadPosRankSum=-0.537;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:2,10,0:0.833,0.000:12:1,5,0:1,5,0:36:79,0,33,358,63,422:135,0,255:0,5:5.0001e+01,1.0811e-03,3.6217e+01,3.6401e+02,9.8084e+01,4.3034e+02:0.00,29.00,32.00,34.77,63.77,37.77:2,0,6,4:1,1,3,7:26608769 chr1 26608866 . C . LowGQ END=26608867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,8:13:0:13:0,0,0:174,0,147:0,5 chr1 26608868 . GGGACTGGGGCCGGGACCGGGACCGGGAC G, 50.00 PASS DP=19;MQ=241.88;MQRankSum=1.032;ReadPosRankSum=2.106;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:8,11,0:0.579,0.000:19:5,6,0:3,5,0:48:79,0,49,399,260,659:135,0,255:0,5:5.0000e+01,7.1187e-05,5.1961e+01,4.0479e+02,2.9442e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:5,3,7,4:4,4,4,7:26608769 chr1 26608869 . G . LowGQ END=26608876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,7:15:0:15:0,0,37:129,0,243:1,5 chr1 26608877 . GCCGGGA G, 11.73 PASS DP=16;MQ=243.14;MQRankSum=0.322;ReadPosRankSum=-0.107;FractionInformativeReads=0.750;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,2,0:0.167,0.000:12:5,1,0:5,1,0:12:33,0,50,64,392,455:255,45,0:0,20:1.1734e+01,3.0159e-01,5.3302e+01,7.6604e+01,4.2686e+02,4.5000e+02:0.00,22.00,25.00,34.77,56.77,37.77:6,4,2,0:5,5,1,1:26608769 chr1 26608878 . C . LowGQ END=26608885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,20:23:0:16:0,0,0:0,0,0:15,20 chr1 26608886 . G . PASS END=26608886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 26608887 . G . PASS END=26608887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:15,0 chr1 26608888 . G . PASS END=26608888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26608889 . A . PASS END=26608889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 26608890 . C . PASS END=26608890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26608891 . C . PASS END=26608891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 26608892 . G . PASS END=26608893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 26608894 . G . PASS END=26608895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 26608896 . C . LowGQ END=26608896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,11:19:0:19:0,0,0:255,0,253:8,0 chr1 26608897 . A . PASS END=26608934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 26608935 . C . PASS END=26608954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 26608955 . T . PASS END=26608970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:13:0,33,495:0,39,255:13,0 chr1 26608971 . A . PASS END=26608972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 26608973 . G . PASS END=26608979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 26608980 . G . PASS END=26608980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 26608981 . C . PASS END=26608982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 26608983 . T . PASS END=26608983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 26608984 . G . PASS END=26608994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,466:0,39,255:13,0 chr1 26608995 . G . PASS END=26608998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 26608999 . C . PASS END=26609000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26609001 . T . PASS END=26609002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26609003 . C . PASS END=26609006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 26609007 . T . PASS END=26609007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26609008 . A . PASS END=26609013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 26609014 . T . PASS END=26609023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 26609024 . T . PASS END=26609024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 26609025 . G . PASS END=26609030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 26609031 . A . PASS END=26609031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 26609032 . A . PASS END=26609039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 26609040 . A . PASS END=26609052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 26609053 . C . PASS END=26609053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 26609054 . C . PASS END=26609055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 26609056 . T . PASS END=26609060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 26609140 . C . PASS END=26609146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 26609147 . G . PASS END=26609147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 26609148 . C . PASS END=26609167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,917:0,75,255:26,0 chr1 26609168 . C . PASS END=26609171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 26609172 . A . PASS END=26609172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 26609173 . A . PASS END=26609178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1070:0,87,255:30,0 chr1 26609179 . T . PASS END=26609179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 26609180 . T . PASS END=26609192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1036:0,90,255:31,0 chr1 26609193 . C . PASS END=26609193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 26609194 . A . PASS END=26609249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1194:0,92,255:38,0 chr1 26609250 . G . PASS END=26609250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 26609251 . G . PASS END=26609254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 26609255 . C . PASS END=26609258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:27,0 chr1 26609259 . C . PASS END=26609259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr1 26609260 . G . PASS END=26609263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1084:0,74,255:26,0 chr1 26609264 . T . PASS END=26609264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:23,0 chr1 26609265 . G . PASS END=26609269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:27:0,72,1078:0,74,255:25,0 chr1 26609270 . A . PASS END=26609270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 26609271 . C . PASS END=26609274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 26609275 . T . PASS END=26609277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 26609278 . C . PASS END=26609278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26609279 . T . PASS END=26609279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 26609280 . C . PASS END=26609280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26609355 . C . PASS END=26609380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,790:0,63,255:26,0 chr1 26609381 . C . PASS END=26609386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 26609387 . C . PASS END=26609387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 26609388 . A . PASS END=26609400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 26609401 . G . PASS END=26609401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 26609402 . G . PASS END=26609403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26609404 . T . PASS END=26609404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 26609405 . C . PASS END=26609405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:27,0 chr1 26609406 . C . PASS END=26609409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 26609410 . C . PASS END=26609428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:25,0 chr1 26610633 . C . PASS END=26610637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 26610638 . A . PASS END=26610638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:27,0 chr1 26610639 . G . PASS END=26610648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1058:0,87,255:31,0 chr1 26610649 . A . PASS END=26610649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 26610650 . T . PASS END=26610736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1180:0,90,255:34,0 chr1 26610853 . C . PASS END=26610853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26610854 . T . PASS END=26610890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,588:0,48,255:19,0 chr1 26610891 . A C, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,7,0:0,10,0:48:136,51,0,650,51,650:255,51,0:0,0:9.8162e+01,4.8162e+01,6.6269e-05,4.5000e+02,8.2932e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,11:0,0,8,9 chr1 26610892 . G . PASS END=26610898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 26610899 . G . PASS END=26610907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 26610908 . A . PASS END=26610913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:14,0 chr1 26610914 . C . PASS END=26610917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 26610918 . C . PASS END=26610924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 26610925 . A . PASS END=26610925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 26610926 . G . PASS END=26610926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26610927 . G . PASS END=26610928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 26610929 . G . PASS END=26610944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr1 26610945 . A . PASS END=26610945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 26610946 . G . PASS END=26610950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 26610951 . A . PASS END=26610951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 26610952 . C . PASS END=26610953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 26610954 . T . PASS END=26610963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 26610964 . A . PASS END=26610964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr1 26610965 . G . PASS END=26610965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 26610966 . T . LowGQ END=26610966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,230:6,0,236:7,0 chr1 26610967 . C . PASS END=26610973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 26611951 . T . PASS END=26611984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:18,0 chr1 26611985 . C . PASS END=26611985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 26611986 . T . PASS END=26612004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,639:0,40,255:19,0 chr1 26612005 . A . PASS END=26612018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,562:0,40,255:19,0 chr1 26612019 . T . PASS END=26612019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,580:0,24,255:14,0 chr1 26612020 . C . PASS END=26612027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:16,0 chr1 26612028 . C . PASS END=26612028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 26612029 . A . PASS END=26612032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26612314 . C . PASS END=26612321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,615:0,41,255:19,0 chr1 26612322 . A . PASS END=26612322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 26612323 . G . PASS END=26612323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:19,0 chr1 26612324 . G . PASS END=26612326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 26612327 . T . PASS END=26612327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 26612328 . C . PASS END=26612330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 26612331 . A . PASS END=26612334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr1 26612335 . G . PASS END=26612335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26612336 . G . PASS END=26612343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26612344 . G . PASS END=26612344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 26612345 . G . PASS END=26612358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 26612359 . C . PASS END=26612359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 26612360 . A . PASS END=26612362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr1 26612363 . A . PASS END=26612363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 26612364 . T . PASS END=26612390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:25,0 chr1 26612391 . T . PASS END=26612391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 26612392 . G . PASS END=26612422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:25,0 chr1 26612423 . G . PASS END=26612459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 26612460 . G A, 50.00 PASS DP=24;MQ=249.92;MQRankSum=4.031;ReadPosRankSum=1.693;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,12,0:0.522,0.000:23:6,5,0:5,7,0:48:85,0,50,335,349,683:255,0,255:11,0:5.0000e+01,6.5233e-05,5.2976e+01,3.3475e+02,3.8341e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,8,3,9:6,5,6,6 chr1 26612461 . C . PASS END=26612474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:22,0 chr1 26612475 . G . PASS END=26612475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 26612476 . C . PASS END=26612496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 26612497 . A . PASS END=26612497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26612498 . A . PASS END=26612528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 26620683 . C . PASS END=26620686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:13,0 chr1 26620687 . C . PASS END=26620688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 26620689 . G . PASS END=26620693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 26620694 . A . PASS END=26620694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 26620695 . C . PASS END=26620704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 26620705 . A . PASS END=26620705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 26620706 . G . PASS END=26620721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:26,0 chr1 26620722 . A . PASS END=26620728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 26620729 . C . PASS END=26620729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26620730 . C . PASS END=26620733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 26620734 . T . PASS END=26620735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 26620736 . G . PASS END=26620794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1197:0,88,255:36,0 chr1 26620795 . A . PASS END=26620803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,85,255:25,0 chr1 26620804 . C . PASS END=26620808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 26620809 . T . PASS END=26620818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:42:29:0,42,630:0,59,255:18,0 chr1 26620819 . A . PASS END=26620819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:39:30:0,39,585:0,90,255:13,0 chr1 26620820 . C . PASS END=26620821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:29:0,42,630:0,87,255:14,0 chr1 26620822 . G . PASS END=26620822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:36:29:0,36,540:0,87,255:12,0 chr1 26623410 . C . PASS END=26623410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 26623411 . T . PASS END=26623419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:23,0 chr1 26623420 . C . PASS END=26623435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr1 26623436 . G . PASS END=26623439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 26623440 . C . PASS END=26623440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 26623441 . A . PASS END=26623450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 26623451 . T . PASS END=26623483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:70:26:0,70,897:0,70,255:26,0 chr1 26623484 . C . PASS END=26623485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 26623486 . G . PASS END=26623486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 26623918 . C . PASS END=26623948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:26,0 chr1 26623949 . C . PASS END=26623955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 26623956 . G . PASS END=26623958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26623959 . G . PASS END=26623959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26623960 . C . PASS END=26623972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:26,0 chr1 26624453 . C . PASS END=26624453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 26624454 . T . PASS END=26624454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,590:0,26,255:18,0 chr1 26624455 . T . PASS END=26624455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 26624456 . G . PASS END=26624467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,699:0,60,255:24,0 chr1 26624468 . A . PASS END=26624468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:23,0 chr1 26624469 . T . PASS END=26624469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 26624470 . C . PASS END=26624471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:24:0,42,827:0,42,255:23,0 chr1 26624472 . G . PASS END=26624477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:25,0 chr1 26624478 . G . PASS END=26624480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26624481 . T . PASS END=26624491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26624492 . C . PASS END=26624493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 26624494 . C . PASS END=26624498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 26624499 . T . PASS END=26624510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1011:0,84,255:28,0 chr1 26624511 . C . PASS END=26624511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 26624512 . T . PASS END=26624517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26624518 . T . PASS END=26624518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr1 26624519 . G . PASS END=26624519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26624520 . A . PASS END=26624520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 26624521 . A . PASS END=26624522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26624523 . G . PASS END=26624525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 26624526 . A . PASS END=26624527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26624528 . C . PASS END=26624547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,930:0,62,255:26,0 chr1 26624548 . C . PASS END=26624548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 26624549 . A . PASS END=26624553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 26627417 . C . PASS END=26627417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 26627418 . T . PASS END=26627428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 26627429 . C . PASS END=26627432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 26627433 . G . PASS END=26627433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 26627434 . G . PASS END=26627440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 26627441 . T . PASS END=26627449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 26627450 . A . PASS END=26627450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 26627451 . G . PASS END=26627466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:31,0 chr1 26627467 . A . PASS END=26627467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr1 26627468 . T . PASS END=26627477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1081:0,93,255:31,0 chr1 26627478 . T C, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=2.679;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:8,7,0:6,10,0:48:85,0,49,608,493,1101:255,0,255:13,0:5.0000e+01,6.8598e-05,5.2366e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,8,9:5,9,8,9 chr1 26627479 . G . PASS END=26627481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26627482 . C . PASS END=26627515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:24:0,64,923:0,64,255:25,0 chr1 26628185 . C . PASS END=26628213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1357:0,100,255:36,0 chr1 26629304 . C . PASS END=26629374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,131,255:40,0 chr1 26644509 . A . PASS END=26644562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1224:0,95,255:38,0 chr1 26646662 . A . PASS END=26646662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr1 26646663 . T . PASS END=26646685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:56:0,120,1800:0,135,255:40,0 chr1 26646686 . A . PASS END=26646725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,168,255:40,0 chr1 26646726 . A G, 48.93 PASS DP=66;MQ=249.56;MQRankSum=5.969;ReadPosRankSum=1.990;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:37,29,0:0.439,0.000:66:20,21,0:17,8,0:46:84,0,47,184,184,184:255,0,255:33,0:4.8927e+01,9.9144e-05,5.0000e+01,1.8370e+02,2.1847e+02,1.8671e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,24,15,14:18,19,13,16:26646726 chr1 26646727 . C . PASS END=26646729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,179,255:40,0 chr1 26646730 . A G, 48.93 PASS DP=65;MQ=249.98;MQRankSum=6.317;ReadPosRankSum=3.002;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:38,27,0:0.415,0.000:65:21,19,0:17,8,0:46:84,0,47,184,184,184:255,0,255:32,0:4.8927e+01,9.9144e-05,5.0000e+01,1.8370e+02,2.1847e+02,1.8671e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,25,15,12:18,20,13,14:26646726 chr1 26646731 . A . PASS END=26646770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,118,1800:0,118,255:40,0 chr1 26646771 . T . PASS END=26646793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:93:40:0,93,1395:0,120,255:40,0 chr1 26648459 . T . PASS END=26648513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1150:0,81,255:38,0 chr1 26648514 . A . PASS END=26648522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,99,1463:0,104,255:36,0 chr1 26648523 . T . PASS END=26648523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:28,0 chr1 26648524 . G . PASS END=26648534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:30,0 chr1 26648535 . T . PASS END=26648536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1045:0,60,255:26,0 chr1 26648537 . G . PASS END=26648540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 26648541 . C . PASS END=26648547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:26,0 chr1 26648655 . C . PASS END=26648655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 26648656 . C . PASS END=26648656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:17,0 chr1 26648657 . T . PASS END=26648674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,637:0,40,255:19,0 chr1 26648675 . C . PASS END=26648681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 26648682 . A . PASS END=26648682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 26648683 . C . PASS END=26648693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr1 26648694 . A . PASS END=26648694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 26648695 . G . PASS END=26648695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 26648696 . A . PASS END=26648696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 26648697 . T . PASS END=26648730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:24,0 chr1 26648731 . C . PASS END=26648731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 26648732 . G . PASS END=26648738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,923:0,75,255:25,0 chr1 26648739 . G . PASS END=26648739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 26648740 . G . PASS END=26648766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,784:0,63,255:25,0 chr1 26648767 . G . PASS END=26648767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 26648768 . C . PASS END=26648785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 26648786 . A . PASS END=26648787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 26648788 . C . PASS END=26648794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:16,0 chr1 26648795 . A . PASS END=26648796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 26648797 . G . PASS END=26648800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:14,0 chr1 26648801 . A . PASS END=26648812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 26648813 . A . PASS END=26648814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 26650643 . C . PASS END=26650648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 26650649 . C . PASS END=26650653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 26650654 . G . PASS END=26650654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 26650655 . C . PASS END=26650663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:26,0 chr1 26650664 . C . PASS END=26650768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:36,0 chr1 26650769 . T . PASS END=26650787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr1 26650788 . A . PASS END=26650788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 26650789 . A . PASS END=26650801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 26654700 . C . PASS END=26654710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 26654711 . G . PASS END=26654731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 26654732 . G . PASS END=26654787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 26654788 . C . PASS END=26654813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr1 26654814 . T . PASS END=26654814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 26654815 . A . PASS END=26654823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 26655225 . A . PASS END=26655233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 26655234 . T . PASS END=26655234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:19,0 chr1 26655235 . T . PASS END=26655235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 26655236 . G . PASS END=26655244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,937:0,62,255:26,0 chr1 26655245 . A . PASS END=26655245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 26655246 . G . PASS END=26655336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1047:0,84,255:40,0 chr1 26655337 . A . PASS END=26655337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1176:0,58,255:32,0 chr1 26655338 . C . PASS END=26655338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 26655339 . A . PASS END=26655339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:33,0 chr1 26655340 . G . PASS END=26655364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1141:0,82,255:33,0 chr1 26657980 . C . PASS END=26657981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 26657982 . G . PASS END=26657986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 26657987 . A . PASS END=26657987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 26657988 . C . PASS END=26657988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 26657989 . C . PASS END=26657999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:18,0 chr1 26658000 . A . PASS END=26658000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,513:0,2,255:17,0 chr1 26658001 . G . PASS END=26658096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,764:0,61,255:26,0 chr1 26658097 . A . PASS END=26658097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 26658098 . A . PASS END=26658105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 26658106 . C . PASS END=26658109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,56,255:18,0 chr1 26662586 . C . PASS END=26662599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 26662600 . C . PASS END=26662600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 26662601 . C . PASS END=26662605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 26662606 . G . PASS END=26662635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,762:0,63,255:25,0 chr1 26662636 . G . PASS END=26662643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr1 26662644 . C . PASS END=26662644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 26662645 . A . PASS END=26662646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:28,0 chr1 26662647 . C . PASS END=26662647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 26662648 . T . PASS END=26662657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,967:0,87,255:29,0 chr1 26662658 . A . PASS END=26662658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:28,0 chr1 26662659 . A . PASS END=26662698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,997:0,83,255:33,0 chr1 26662829 . C . PASS END=26662861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1149:0,82,255:32,0 chr1 26663097 . C . PASS END=26663097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 26663098 . T . PASS END=26663098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:17,0 chr1 26663099 . G . PASS END=26663113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 26663114 . G . PASS END=26663114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 26663115 . C . PASS END=26663126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 26663127 . G . PASS END=26663130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr1 26663131 . T . PASS END=26663132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 26663133 . G . PASS END=26663134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 26663135 . C . PASS END=26663135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 26663136 . A . PASS END=26663139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 26663140 . C . PASS END=26663140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 26663141 . C . PASS END=26663143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 26663144 . A . PASS END=26663144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr1 26663145 . G . PASS END=26663145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 26663146 . T . PASS END=26663146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 26663147 . C . PASS END=26663150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 26663151 . G . PASS END=26663151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 26663152 . C . PASS END=26663153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26663154 . G . PASS END=26663154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 26663155 . T . PASS END=26663159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 26663160 . A . PASS END=26663160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26663161 . T . PASS END=26663161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:27,0 chr1 26663162 . A . PASS END=26663163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1054:0,84,255:28,0 chr1 26663164 . A . PASS END=26663164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr1 26663165 . C . PASS END=26663166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 26663167 . C . PASS END=26663167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26663168 . C . PASS END=26663168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 26663169 . C . PASS END=26663176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 26663177 . G . PASS END=26663177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 26663178 . C . PASS END=26663178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26663179 . A . PASS END=26663198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,849:0,67,255:26,0 chr1 26663199 . G . PASS END=26663200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 26663201 . C . PASS END=26663204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 26663205 . C . PASS END=26663205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr1 26663206 . T . PASS END=26663212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 26663213 . A . PASS END=26663213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 26663214 . G . PASS END=26663223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,976:0,68,255:26,0 chr1 26663332 . A . PASS END=26663334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26663335 . C . PASS END=26663361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:28:0,83,1062:0,83,255:38,0 chr1 26663362 . C T,G, 161.36 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,1,0:0.974,0.026,0.000:39:0,17,1,0:0,21,0,0:111:199,114,0,1442,107,192,1456,114,1442,1456:255,120,0:0,0:1.6136e+02,1.1136e+02,0.0000e+00,4.5000e+02,1.3915e+02,1.9215e+02,4.5000e+02,1.4613e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,22,17:0,0,23,16 chr1 26663363 . T . PASS END=26663399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:40:0,84,1421:0,84,255:40,0 chr1 26663400 . C . PASS END=26663417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,102,1530:0,104,255:37,0 chr1 26663418 . G . PASS END=26663418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:34,0 chr1 26663419 . T . PASS END=26663464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1094:0,87,255:36,0 chr1 26663465 . C . PASS END=26663471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 26663744 . C . PASS END=26663764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:18,0 chr1 26663765 . G . PASS END=26663768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 26663769 . A . PASS END=26663796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 26663797 . A . PASS END=26663797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26663798 . C . PASS END=26663846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:15:0,40,574:0,40,255:19,0 chr1 26663847 . C . PASS END=26663847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 26663848 . C . PASS END=26663853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 26663854 . T . PASS END=26663854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,564:0,35,255:16,0 chr1 26663855 . C . PASS END=26663870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 26664029 . C . PASS END=26664031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 26664032 . C . PASS END=26664032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 26664033 . C . PASS END=26664050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:24:0,68,914:0,68,255:26,0 chr1 26664051 . A . PASS END=26664057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1111:0,87,255:31,0 chr1 26664058 . A . PASS END=26664058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 26664059 . G . PASS END=26664151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1178:0,86,255:40,0 chr1 26664152 . T . PASS END=26664165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,75,255:25,0 chr1 26664503 . C . PASS END=26664505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 26664506 . G . PASS END=26664512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 26664513 . C . PASS END=26664513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 26664514 . C . PASS END=26664538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1055:0,80,255:32,0 chr1 26664842 . C . PASS END=26664844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26664845 . T . PASS END=26664845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 26664846 . C . PASS END=26664930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1057:0,87,255:40,0 chr1 26664931 . G . PASS END=26664942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:35,0 chr1 26664943 . A . PASS END=26664943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:30,0 chr1 26664944 . T . PASS END=26664949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:31,0 chr1 26664950 . T . PASS END=26664962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:27:0,69,1035:0,81,255:26,0 chr1 26664963 . A . PASS END=26664963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 26664964 . G . PASS END=26664967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 26664968 . C T, 46.20 PASS DP=27;MQ=250.00;MQRankSum=4.243;ReadPosRankSum=0.678;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,10,0:0.370,0.000:27:8,4,0:9,6,0:45:81,0,50,358,571,928:255,0,255:13,0:4.6196e+01,1.2607e-04,5.3000e+01,3.5755e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,3,7:10,7,5,5 chr1 26665781 . A . PASS END=26665781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26665782 . G . PASS END=26665784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26665785 . C . PASS END=26665785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 26665786 . T . PASS END=26665787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26665788 . C . PASS END=26665788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 26665789 . A . PASS END=26665790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 26665791 . A . PASS END=26665791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 26665792 . G . PASS END=26665818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,642:0,63,255:23,0 chr1 26665819 . C . PASS END=26665819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 26665820 . T . PASS END=26665851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:24,0 chr1 26665852 . T . PASS END=26665852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 26665853 . G . PASS END=26665868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 26665869 . C . PASS END=26665906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:16:0,41,630:0,41,255:19,0 chr1 26665907 . G . PASS END=26665912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 26665913 . C . PASS END=26665917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26665918 . G . PASS END=26665920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 26669245 . C . PASS END=26669374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:40:0,81,1405:0,81,255:40,0 chr1 26669538 . C . PASS END=26669546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 26669547 . A . PASS END=26669547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 26669548 . C . PASS END=26669554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 26669555 . T . PASS END=26669555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:28,0 chr1 26669556 . A . PASS END=26669556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26669557 . T . PASS END=26669562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 26669563 . C . PASS END=26669565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 26669566 . C . PASS END=26669566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:27,0 chr1 26669567 . G . PASS END=26669621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:28:0,83,1086:0,83,255:32,0 chr1 26669622 . T . PASS END=26669635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1024:0,71,255:26,0 chr1 26669636 . T . PASS END=26669636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:23,0 chr1 26669637 . G . PASS END=26669650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:24,0 chr1 26669737 . C . PASS END=26669738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 26669739 . T . PASS END=26669739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,558:0,2,255:17,0 chr1 26669740 . T . PASS END=26669740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 26669741 . C . PASS END=26669741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:17,0 chr1 26669742 . C . PASS END=26669746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:18,0 chr1 26669747 . C . PASS END=26669747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26669748 . T . PASS END=26669749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26669750 . G . PASS END=26669751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26669752 . G . PASS END=26669752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 26669753 . T . PASS END=26669765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 26669766 . G . PASS END=26669773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26669774 . A . PASS END=26669774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:19,0 chr1 26669775 . A . PASS END=26669778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 26669779 . T . PASS END=26669779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 26669780 . G . PASS END=26669784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 26670236 . C . PASS END=26670238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26670239 . C . PASS END=26670255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:15,0 chr1 26670256 . A . PASS END=26670256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 26670257 . A . PASS END=26670301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:18,0 chr1 26670302 . G . PASS END=26670306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 26670307 . A . PASS END=26670473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,524:0,48,255:19,0 chr1 26670474 . A . PASS END=26670475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 26670476 . T . PASS END=26670477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26670478 . C . PASS END=26670480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 26670481 . G . PASS END=26670481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 26670482 . C . PASS END=26670482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 26670483 . T . PASS END=26670560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,629:0,45,255:18,0 chr1 26670561 . G . PASS END=26670561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 26670562 . C . PASS END=26670583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:18,0 chr1 26670584 . G . PASS END=26670590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,713:0,60,255:21,0 chr1 26670591 . C . PASS END=26670591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 26670592 . C . PASS END=26670594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:24,0 chr1 26670595 . C . PASS END=26670595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 26670596 . T . PASS END=26670597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 26670598 . T . PASS END=26670599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 26670600 . T . PASS END=26670651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,848:0,62,255:26,0 chr1 26670652 . C . PASS END=26670652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 26670653 . C . PASS END=26670661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:25,0 chr1 26670662 . C . PASS END=26670662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr1 26670663 . T . PASS END=26670690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,840:0,61,255:26,0 chr1 26670691 . C . PASS END=26670691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 26670692 . C . PASS END=26670704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:23,0 chr1 26670705 . G . PASS END=26670706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 26670707 . G . PASS END=26670714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 26670715 . C . PASS END=26670719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26670720 . G . PASS END=26670751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,49,255:22,0 chr1 26670752 . C T, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=1.592;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:5,4,0:4,6,0:48:85,0,50,355,322,677:255,0,255:9,0:5.0000e+01,6.5751e-05,5.2888e+01,3.5497e+02,3.5667e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,4,6:5,4,6,4 chr1 26670753 . G . PASS END=26670754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26670755 . G . PASS END=26670755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26670756 . G . PASS END=26670758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26670759 . T . PASS END=26670762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26670763 . T . PASS END=26670766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26670767 . C . PASS END=26670767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26670768 . A . PASS END=26670768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 26670769 . G . PASS END=26670789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:24,0 chr1 26670790 . G . PASS END=26670796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 26670797 . C . PASS END=26670797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 26670798 . C . PASS END=26670809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 26670810 . A . PASS END=26670810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 26670811 . G . PASS END=26670836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 26670837 . A . PASS END=26670837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 26670838 . G . PASS END=26670852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:24,0 chr1 26670853 . T . PASS END=26670853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 26670854 . C . PASS END=26670871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,937:0,62,255:25,0 chr1 26670872 . G . PASS END=26670874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26670875 . C . PASS END=26670888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,911:0,78,255:26,0 chr1 26670889 . C . PASS END=26670889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 26670890 . C . PASS END=26670930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,845:0,69,255:26,0 chr1 26670931 . A . PASS END=26670935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 26670936 . A . PASS END=26670944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 26670945 . T . PASS END=26670947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26670948 . G . PASS END=26670955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 26670956 . C . PASS END=26670984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:19,0 chr1 26670985 . T . PASS END=26670987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 26670988 . C . PASS END=26671046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,559:0,41,255:19,0 chr1 26671047 . T . PASS END=26671059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 26671060 . C . PASS END=26671070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr1 26671071 . A . PASS END=26671071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr1 26671072 . G . PASS END=26671074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 26671075 . A . PASS END=26671075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 26671076 . T . PASS END=26671083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 26671084 . G T, 49.68 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=1.681;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:4,6,0:8,4,0:48:84,0,50,341,400,741:255,0,255:11,0:4.9677e+01,6.8598e-05,5.3000e+01,3.4074e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,5,5:6,6,5,5 chr1 26671085 . G . PASS END=26671087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 26671088 . C . PASS END=26671088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26671089 . C . PASS END=26671091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26671092 . T . PASS END=26671092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 26671093 . C . PASS END=26671121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:22:0,60,864:0,61,255:26,0 chr1 26671122 . G . PASS END=26671122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 26671123 . G . PASS END=26671123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 26671124 . G . PASS END=26671147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,931:0,62,255:26,0 chr1 26671148 . G . PASS END=26671154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 26671155 . A . PASS END=26671157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 26671158 . G . PASS END=26671170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1015:0,84,255:28,0 chr1 26671171 . T . PASS END=26671179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1039:0,71,255:26,0 chr1 26671180 . G . PASS END=26671196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:29,0 chr1 26671197 . A . PASS END=26671197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 26671198 . T . PASS END=26671198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:24,0 chr1 26671199 . A . PASS END=26671199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 26671200 . C . PASS END=26671209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 26671210 . C . PASS END=26671210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 26671211 . C . PASS END=26671216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 26671217 . T . PASS END=26671217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 26671218 . T . PASS END=26671247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1103:0,80,255:32,0 chr1 26671248 . A G, 48.91 PASS DP=32;MQ=231.70;MQRankSum=0.323;ReadPosRankSum=3.628;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:6,7,0:12,7,0:47:84,0,50,501,631,1132:255,0,255:17,0:4.8910e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,5,7,7:9,9,6,8 chr1 26671249 . C . PASS END=26671285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1305:0,96,255:40,0 chr1 26671286 . A . PASS END=26671471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:43:0,97,1485:0,97,255:40,0 chr1 26671472 . G . PASS END=26671501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1350:0,95,255:40,0 chr1 26671502 . C . PASS END=26671502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1302:0,59,255:31,0 chr1 26671503 . A . PASS END=26671510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1219:0,88,255:34,0 chr1 26671511 . T . PASS END=26671512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1111:0,47,255:30,0 chr1 26671513 . T . PASS END=26671514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 26671515 . C . LowGQ END=26671516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:34:0,0,993:6,0,255:26,0 chr1 26671517 . G . PASS END=26671517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,88,255:28,0 chr1 26671518 . G . PASS END=26671518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr1 26671519 . T . PASS END=26671519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:30,0 chr1 26671520 . G . PASS END=26671520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:30,0 chr1 26671521 . G . PASS END=26671521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:29,0 chr1 26671522 . GAAATGAGGCATCA G, 39.79 PASS DP=37;MQ=174.48;MQRankSum=-4.648;ReadPosRankSum=-3.742;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:24,12,0:0.333,0.000:36:14,9,0:10,3,0:40:69,0,50,488,1005,1493:0,85,255:30,0:3.9786e+01,4.7788e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:11,13,3,9:11,13,4,8:26671522 chr1 26671523 . A . LowGQ END=26671524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,12:35:0:34:0,0,449:217,0,255:25,0 chr1 26671525 . A . PASS END=26671525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 26671526 . T . LowGQ END=26671526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,867:108,0,255:26,0 chr1 26671527 . G . PASS END=26671532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1202:0,86,255:31,0 chr1 26671533 . T . LowGQ END=26671533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,11:35:0:35:0,0,541:255,0,255:21,0 chr1 26671534 . C . PASS END=26671534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1171:0,44,255:27,0 chr1 26671535 . A . PASS END=26671536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 26671537 . G . PASS END=26671537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:29,0 chr1 26671538 . AGCAC A, 36.69 PASS DP=40;MQ=172.13;MQRankSum=-4.822;ReadPosRankSum=-2.263;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:28,11,0:0.282,0.000:39:16,7,0:12,4,0:36:67,0,47,167,167,167:0,105,255:29,0:3.6691e+01,9.7394e-04,5.0001e+01,1.7146e+02,2.0146e+02,1.7447e+02:0.00,30.00,33.01,34.77,64.77,37.78:13,15,2,9:15,13,4,7:26671522 chr1 26671539 . G . PASS END=26671541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:93:37:0,93,1395:0,104,255:35,0 chr1 26671542 . C . PASS END=26671542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1451:0,79,255:34,0 chr1 26671543 . C . LowGQ END=26671543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:0:40:0,0,1084:46,0,255:34,0 chr1 26671544 . GGGGCCCTTCACGACCTCTTTCCAGGTGGGGAACA G, 36.69 PASS DP=48;MQ=161.71;MQRankSum=-3.565;ReadPosRankSum=-1.263;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:34,12,0:0.261,0.000:46:17,7,0:17,5,0:36:67,0,47,167,167,167:162,0,255:27,0:3.6691e+01,9.7394e-04,5.0001e+01,1.7146e+02,2.0146e+02,1.7447e+02:0.00,30.00,33.01,34.77,64.77,37.78:15,19,2,10:18,16,5,7:26671522 chr1 26671545 . G . PASS END=26671545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1374:0,103,255:36,0 chr1 26671546 . G . LowGQ END=26671547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:0:40:0,0,1133:29,0,255:35,0 chr1 26671548 . C . PASS END=26671548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:40:0,90,1451:0,90,255:33,0 chr1 26671549 . C . PASS END=26671549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1333:0,62,255:33,0 chr1 26671550 . C . PASS END=26671550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1382:0,86,255:34,0 chr1 26671551 . T . PASS END=26671552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1276:0,75,255:34,0 chr1 26671553 . C . PASS END=26671554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1388:0,98,255:34,0 chr1 26671555 . C . PASS END=26671555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1333:0,75,255:34,0 chr1 26671556 . G . LowGQ END=26671556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,9:38:0:38:0,0,701:227,0,255:26,0 chr1 26671557 . A . PASS END=26671565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1242:0,81,255:34,0 chr1 26671566 . C . PASS END=26671566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1119:0,75,255:31,0 chr1 26671567 . A . PASS END=26671567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1139:0,36,255:30,0 chr1 26671568 . G . PASS END=26671568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:32,0 chr1 26671569 . G . PASS END=26671570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1286:0,92,255:34,0 chr1 26671571 . G . PASS END=26671571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 26671572 . G . PASS END=26671572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1340:0,92,255:32,0 chr1 26671573 . G . LowGQ END=26671573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1084:44,0,255:31,0 chr1 26671574 . G . PASS END=26671574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:36,0 chr1 26671575 . A . LowGQ END=26671575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,17:40:0:40:0,0,315:255,0,255:21,0 chr1 26671576 . A . PASS END=26671576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 26671577 . C . PASS END=26671577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:37,0 chr1 26671578 . A . LowGQ END=26671578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,11:40:0:40:0,0,742:232,0,255:28,0 chr1 26671579 . A . PASS END=26671583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:40:0,106,1421:0,106,255:39,0 chr1 26671584 . G . PASS END=26671584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1382:0,68,255:39,0 chr1 26671585 . C . PASS END=26671593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,105,1559:0,105,255:40,0 chr1 26671594 . T C, 11.67 PASS DP=48;MQ=164.57;MQRankSum=-3.425;ReadPosRankSum=-1.407;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,7,0:0.152,0.000:46:27,1,0:12,6,0:12:46,0,47,147,147,147:160,0,255:37,0:1.1669e+01,3.0630e-01,5.0306e+01,1.4730e+02,1.8207e+02,1.5031e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,25,2,5:18,21,6,1 chr1 26671595 . G A, 11.67 PASS DP=48;MQ=164.57;MQRankSum=-3.425;ReadPosRankSum=-1.193;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,7,0:0.152,0.000:46:27,1,0:12,6,0:12:46,0,47,147,147,147:128,0,255:38,0:1.1669e+01,3.0630e-01,5.0306e+01,1.4730e+02,1.8207e+02,1.5031e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,25,2,5:18,21,6,1 chr1 26671596 . G . PASS END=26671624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,101,1715:0,101,255:40,0 chr1 26671625 . A G, 25.49 PASS DP=56;MQ=129.26;MQRankSum=-4.427;ReadPosRankSum=-0.262;FractionInformativeReads=0.946;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,16,0:0.302,0.000:53:24,4,0:13,12,0:25:60,0,50,276,1199,1475:255,0,255:38,0:2.5486e+01,1.2319e-02,5.3012e+01,2.7583e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,23,8,8:19,18,10,6 chr1 26671626 . G . PASS END=26671646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:94:59:0,94,1800:0,94,255:40,0 chr1 26671647 . G . PASS END=26671657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,166,255:40,0 chr1 26671658 . G A, 20.78 PASS DP=67;MQ=137.80;MQRankSum=-4.655;ReadPosRankSum=5.859;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,15,0:0.224,0.000:67:30,4,0:22,11,0:21:56,0,50,500,1768,2268:255,0,255:40,0:2.0781e+01,3.6456e-02,5.3036e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,32,4,11:26,26,11,4 chr1 26671659 . A . PASS END=26671689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,133,255:40,0 chr1 26671690 . A G, 20.13 PASS DP=62;MQ=155.61;MQRankSum=-5.252;ReadPosRankSum=1.879;FractionInformativeReads=0.968;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,14,0:0.233,0.000:60:22,4,0:24,10,0:20:55,0,50,493,1539,2031:255,0,255:40,0:2.0132e+01,4.2353e-02,5.3042e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,29,5,9:23,23,11,3 chr1 26671691 . A . PASS END=26671718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:57:0,84,1800:0,84,255:40,0 chr1 26671719 . C T, 19.53 PASS DP=53;MQ=166.63;MQRankSum=-5.006;ReadPosRankSum=-2.313;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,12,0:0.231,0.000:52:19,5,0:21,7,0:20:54,0,50,421,1299,1720:255,0,255:39,0:1.9528e+01,4.8714e-02,5.3049e+01,4.2083e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,21,7,5:16,24,8,4 chr1 26671720 . G . PASS END=26671747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,137,255:40,0 chr1 26671748 . G A, 2.32 DRAGENSnpHardQUAL DP=46;MQ=190.80;MQRankSum=-3.589;ReadPosRankSum=-2.220;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:39,6,0:0.133,0.000:45:16,3,0:23,3,0:4:33,0,50,212,1359,1578:105,0,255:39,0:2.3190e+00,3.8329e+00,5.6833e+01,2.1592e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,23,1,5:15,24,4,2 chr1 26671749 . G . PASS END=26671769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:40:0,87,1440:0,87,255:40,0 chr1 26671770 . T . PASS END=26671770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:30,0 chr1 26671771 . G . PASS END=26671785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:35:0,85,1440:0,85,255:35,0 chr1 26671786 . C . PASS END=26671882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:33,0 chr1 26671883 . T . PASS END=26671904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:25,0 chr1 26671905 . A . PASS END=26671907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 26671908 . G . PASS END=26671908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26671909 . T . PASS END=26671923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,50,255:19,0 chr1 26671924 . T . PASS END=26671925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26671926 . A . PASS END=26671949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,47,255:19,0 chr1 26671950 . G . PASS END=26671953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,543:0,31,255:13,0 chr1 26671954 . G . PASS END=26671956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 26671957 . C . PASS END=26671957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 26671958 . C . PASS END=26671958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 26671959 . A . PASS END=26671959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 26671960 . C . PASS END=26671961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26671962 . G . PASS END=26671962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 26671963 . G . PASS END=26672025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,607:0,40,255:19,0 chr1 26672026 . C . PASS END=26672092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,778:0,62,255:25,0 chr1 26672093 . G . PASS END=26672093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26672094 . G . PASS END=26672098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26672099 . T . PASS END=26672103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 26672104 . C . PASS END=26672105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26672106 . T . PASS END=26672177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:19,0 chr1 26672178 . C . PASS END=26672178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 26672179 . T . PASS END=26672190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,598:0,48,255:17,0 chr1 26672191 . C . PASS END=26672194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,54,255:13,0 chr1 26672195 . G . PASS END=26672209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,675:0,41,255:16,0 chr1 26672210 . C . PASS END=26672210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 26672211 . G . PASS END=26672218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 26672219 . T . PASS END=26672219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 26672220 . G . PASS END=26672241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,507:0,45,255:16,0 chr1 26672242 . G . PASS END=26672262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 26672263 . T . PASS END=26672273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 26672274 . G . PASS END=26672291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,488:0,39,255:13,0 chr1 26672292 . T . PASS END=26672292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 26672293 . T . PASS END=26672300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 26672301 . G . PASS END=26672301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 26672302 . C . PASS END=26672309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 26672310 . G . PASS END=26672310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 26672311 . T . PASS END=26672320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 26672321 . C . PASS END=26672381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,388:0,33,255:13,0 chr1 26672382 . G . PASS END=26672449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:18,0 chr1 26672450 . C . PASS END=26672450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 26672451 . T . PASS END=26672488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,637:0,41,255:19,0 chr1 26672489 . C . PASS END=26672491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26672492 . T . PASS END=26672492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 26672493 . G . PASS END=26672513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,864:0,66,255:25,0 chr1 26672514 . T . PASS END=26672514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 26672515 . G . PASS END=26672537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,901:0,65,255:26,0 chr1 26672538 . C . PASS END=26672556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1133:0,87,255:30,0 chr1 26672557 . C . PASS END=26672557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:24,0 chr1 26672558 . A . PASS END=26672567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,970:0,70,255:25,0 chr1 26672568 . C . PASS END=26672568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr1 26672569 . T . PASS END=26672602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:25,0 chr1 26672603 . T . PASS END=26672603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 26672604 . G . PASS END=26672608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 26672609 . G . PASS END=26672609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,807:0,36,255:23,0 chr1 26672610 . G . PASS END=26672643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:26,0 chr1 26672644 . G . PASS END=26672644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr1 26672645 . G . PASS END=26672646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 26672647 . T . PASS END=26672648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26672649 . C . PASS END=26672649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 26672650 . G . PASS END=26672651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 26672652 . G . PASS END=26672652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 26672653 . A . PASS END=26672656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 26672657 . A . PASS END=26672657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 26672658 . C . PASS END=26672686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 26672687 . A . PASS END=26672687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 26672688 . C . PASS END=26672694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 26672695 . C . PASS END=26672695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 26672696 . T . PASS END=26672705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr1 26672706 . G . PASS END=26672706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 26672707 . G . PASS END=26672735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 26672736 . A . PASS END=26672736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:24,0 chr1 26672737 . T . PASS END=26672737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 26672738 . A . PASS END=26672739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 26672740 . C . PASS END=26672750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 26672751 . G . PASS END=26672751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 26672752 . G . PASS END=26672762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,969:0,65,255:24,0 chr1 26672763 . C . PASS END=26672763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 26672764 . T . PASS END=26672785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr1 26672786 . A . PASS END=26672786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr1 26672787 . C . PASS END=26672799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:26,0 chr1 26672800 . C . PASS END=26672800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 26672801 . C . PASS END=26672809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 26672810 . C . PASS END=26672810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 26672811 . C . PASS END=26672811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 26672812 . T . PASS END=26672812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 26672813 . C . PASS END=26672818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,1 chr1 26672819 . A . PASS END=26672819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:25:0,40,896:0,40,255:20,1 chr1 26672820 . G . PASS END=26672827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 26672828 . C . PASS END=26672842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,50,255:19,0 chr1 26672843 . T . PASS END=26672843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 26672844 . A . PASS END=26672844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 26672845 . T . PASS END=26672845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 26672846 . G . PASS END=26672846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 26672847 . T . PASS END=26672848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 26672849 . C . PASS END=26672849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr1 26672850 . T . PASS END=26672851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26672852 . C . PASS END=26672852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 26672853 . T . PASS END=26672853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26672854 . T . PASS END=26672854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 26672855 . G . PASS END=26672855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26672856 . G . PASS END=26672856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 26672857 . A . PASS END=26672859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26672860 . A . PASS END=26672860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 26672861 . G . PASS END=26672861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 26672862 . A . PASS END=26672862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:19,0 chr1 26672863 . T . PASS END=26672863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 26672864 . G . PASS END=26672864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26672865 . G . PASS END=26672865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 26672866 . G . PASS END=26672866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 26672867 . T . PASS END=26672867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 26672868 . C . PASS END=26672870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 26672871 . T . PASS END=26672871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 26672872 . G . PASS END=26672872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 26672873 . G . PASS END=26672874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,875:0,56,255:23,0 chr1 26672875 . T . PASS END=26672901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:26,0 chr1 26672902 . C . PASS END=26672905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 26672906 . A . PASS END=26672911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26672912 . C . PASS END=26672912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26672913 . T . PASS END=26672914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 26672915 . G . PASS END=26672925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 26672926 . T . PASS END=26672926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 26672927 . C . PASS END=26672927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26672928 . T . PASS END=26672928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr1 26672929 . C . PASS END=26672929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 26672930 . T . PASS END=26672930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:27,0 chr1 26672931 . T . PASS END=26672931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:26,0 chr1 26672932 . C . PASS END=26672942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 26672943 . G . PASS END=26672943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 26672944 . C . PASS END=26672947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 26672948 . G . PASS END=26672948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 26672949 . C . PASS END=26672952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26672953 . T . PASS END=26672953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,978:0,35,255:25,0 chr1 26672954 . G . PASS END=26672956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 26672957 . T . PASS END=26672957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:25,0 chr1 26672958 . T . PASS END=26672961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 26672962 . C . PASS END=26672962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26672963 . T . PASS END=26672970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26672971 . G . PASS END=26672971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr1 26672972 . A . PASS END=26672996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:25,0 chr1 26672997 . T . PASS END=26672997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:23,1 chr1 26672998 . G . PASS END=26673002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:40:25:0,40,843:0,40,255:23,1 chr1 26673003 . G . PASS END=26673003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:23,1 chr1 26673004 . C . PASS END=26673004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:23,0 chr1 26673005 . T . PASS END=26673005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 26673006 . T . PASS END=26673006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:21,0 chr1 26673007 . C . PASS END=26673007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 26673008 . C . PASS END=26673008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 26673009 . A . PASS END=26673011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 26673012 . T . PASS END=26673012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 26673013 . G . PASS END=26673028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,831:0,69,255:23,0 chr1 26673029 . G . PASS END=26673038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr1 26673039 . T . PASS END=26673041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:18:0,42,630:0,44,255:15,0 chr1 26673042 . A . PASS END=26673044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 26673045 . C . PASS END=26673049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 26673050 . T . PASS END=26673050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:13,0 chr1 26673051 . T . PASS END=26673055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 26673056 . C . PASS END=26673056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:13,0 chr1 26673057 . T . PASS END=26673060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 26673061 . C . PASS END=26673061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:13,0 chr1 26673062 . C . PASS END=26673062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 26673063 . T . PASS END=26673075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 26673076 . G A, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.165;ReadPosRankSum=-0.965;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,8,0:0.571,0.000:14:3,7,0:3,1,0:47:85,0,47,257,207,464:246,0,183:6,0:5.0000e+01,8.8013e-05,4.9885e+01,2.5733e+02,2.4132e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,6,1,7:3,3,2,6 chr1 26673077 . C . PASS END=26673078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 26673079 . G . PASS END=26673084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:9,0 chr1 26673085 . A . PASS END=26673090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,419:0,36,255:12,0 chr1 26673091 . A . PASS END=26673091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,349:0,5,255:11,0 chr1 26673092 . T . PASS END=26673104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 26673105 . A . PASS END=26673106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,352:0,22,255:11,0 chr1 26673107 . T . PASS END=26673107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 26673108 . C T, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=0.271;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,8,0:0.615,0.000:13:2,5,0:3,3,0:48:85,0,49,229,179,407:204,0,155:5,0:5.0000e+01,7.1964e-05,5.1818e+01,2.2857e+02,2.1352e+02,4.1033e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,2,6:2,3,1,7 chr1 26673109 . G . PASS END=26673111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 26673112 . C . PASS END=26673112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:10,0 chr1 26673113 . C . PASS END=26673113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:11,0 chr1 26673114 . T . PASS END=26673119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,390:0,36,255:13,0 chr1 26673120 . C . PASS END=26673120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 26673121 . G . PASS END=26673121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 26673122 . G . PASS END=26673130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr1 26673131 . C . PASS END=26673132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26673133 . C . PASS END=26673133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26673134 . A . PASS END=26673134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 26673135 . C . PASS END=26673145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr1 26673146 . C . PASS END=26673153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr1 26673154 . G . PASS END=26673154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 26673155 . C . PASS END=26673155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 26673156 . C . PASS END=26673156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 26673157 . C . PASS END=26673161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 26673162 . A . PASS END=26673162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 26673163 . A . PASS END=26673172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,588:0,48,255:16,0 chr1 26673173 . A . PASS END=26673173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:14,0 chr1 26673174 . G . PASS END=26673182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:17,0 chr1 26673183 . G . PASS END=26673199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,599:0,48,255:17,0 chr1 26673200 . C . PASS END=26673200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 26673201 . T . PASS END=26673201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26673202 . C . PASS END=26673203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 26676988 . C . PASS END=26677103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,112,1755:0,112,255:40,0 chr1 26680537 . A . PASS END=26680537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 26680538 . G . PASS END=26680545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 26680546 . G . PASS END=26680546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 26680547 . G . PASS END=26680549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 26680550 . A . PASS END=26680550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 26680551 . C . PASS END=26680582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,841:0,61,255:26,0 chr1 26680583 . G . PASS END=26680585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26680586 . G . PASS END=26680590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1047:0,71,255:26,0 chr1 26680591 . G . PASS END=26680591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26680592 . T . PASS END=26680595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 26680596 . C . PASS END=26680610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 26680611 . G . PASS END=26680611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 26680612 . G . PASS END=26680613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26680614 . T . PASS END=26680614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:26,0 chr1 26680615 . C . PASS END=26680649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1180:0,90,255:31,0 chr1 26680650 . C . PASS END=26680653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 26680654 . G . PASS END=26680657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 26680658 . T . PASS END=26680694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1102:0,84,255:29,0 chr1 26680695 . A G, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,17,0:0,12,0:84:172,87,0,1125,87,1125:255,87,0:0,0:1.3428e+02,8.4282e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,16:0,0,19,10 chr1 26680696 . G . PASS END=26680697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26680698 . T . PASS END=26680732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 26680733 . C . PASS END=26680756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,986:0,68,255:26,0 chr1 26680757 . G . PASS END=26680763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 26680764 . C . PASS END=26680764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:29,0 chr1 26680765 . C . PASS END=26680772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 26680773 . C . PASS END=26680773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:29,0 chr1 26680774 . A . PASS END=26680784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1177:0,80,255:32,0 chr1 26680785 . A . PASS END=26680785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1060:0,60,255:27,0 chr1 26680786 . G . PASS END=26680788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 26680789 . A . PASS END=26680789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:28,0 chr1 26680790 . T . PASS END=26680804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1216:0,83,255:31,0 chr1 26680805 . T . PASS END=26680805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 26680806 . C . PASS END=26680818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1178:0,83,255:32,0 chr1 26680819 . C . PASS END=26680823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 26680824 . G . PASS END=26680831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:30,0 chr1 26680832 . T . PASS END=26680832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 26680833 . C . PASS END=26680841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1131:0,90,255:31,0 chr1 26680842 . C . PASS END=26680842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 26680843 . T . PASS END=26680849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 26680850 . A . PASS END=26680850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 26680851 . G . PASS END=26680853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 26680854 . A . PASS END=26680854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 26680855 . G . PASS END=26680855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26680856 . T . PASS END=26680857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 26680858 . C . PASS END=26680861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26680862 . G . PASS END=26680862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 26680863 . G . PASS END=26680863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26680864 . G . PASS END=26680866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 26680867 . G . PASS END=26680870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 26680871 . G . PASS END=26680871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 26680872 . C . PASS END=26680901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1028:0,90,255:30,0 chr1 26680902 . G . PASS END=26680906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 26680907 . C . PASS END=26680938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1124:0,87,255:30,0 chr1 26680939 . T . PASS END=26680963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 26680964 . G . PASS END=26681035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,629:0,47,255:19,0 chr1 26681036 . C . PASS END=26681038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 26681039 . G . PASS END=26681040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26681041 . C . PASS END=26681063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,495:0,31,255:14,0 chr1 26681064 . A . PASS END=26681064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 26681065 . C . PASS END=26681085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:12,0 chr1 26681086 . A . PASS END=26681086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 26681087 . C . PASS END=26681105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 26681106 . A . PASS END=26681106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr1 26681107 . G . PASS END=26681121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 26681122 . T . PASS END=26681140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr1 26681141 . C . PASS END=26681141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 26681142 . G . PASS END=26681149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 26681150 . C . PASS END=26681152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26681153 . C . PASS END=26681153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 26681154 . T . PASS END=26681167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:25,0 chr1 26681168 . G . PASS END=26681168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 26681169 . C . PASS END=26681179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,925:0,78,255:26,0 chr1 26681180 . G . PASS END=26681198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 26681199 . T . PASS END=26681199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 26681200 . C . PASS END=26681204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 26681205 . T . PASS END=26681205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 26681206 . T . PASS END=26681213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 26681214 . A . PASS END=26681214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 26681215 . A . PASS END=26681220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26681221 . A . PASS END=26681221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 26681222 . A . PASS END=26681226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 26681227 . T . PASS END=26681240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 26681241 . A . PASS END=26681241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:25,0 chr1 26681242 . T . PASS END=26681258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 26681259 . G . PASS END=26681268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,69,255:18,0 chr1 26681269 . C . PASS END=26681276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:16,0 chr1 26682950 . C . PASS END=26682950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 26682951 . T . PASS END=26682951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 26682952 . T . PASS END=26682970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:36,0 chr1 26682971 . G . PASS END=26682998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1070:0,84,255:36,0 chr1 26682999 . C . PASS END=26682999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 26683000 . G . PASS END=26683001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26683002 . C . PASS END=26683007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 26683008 . A C, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,14,0:0,14,0:81:169,84,0,1077,84,1077:255,84,0:0,0:1.3127e+02,8.1269e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,17:0,0,15,13 chr1 26683009 . G . PASS END=26683013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:24,0 chr1 26686428 . C . PASS END=26686518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:41:0,90,1350:0,107,255:40,0 chr1 26686519 . G . PASS END=26686520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:60:40:0,60,900:0,120,255:20,0 chr1 26686521 . C . PASS END=26686532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:45:21:0,45,675:0,63,255:19,0 chr1 26686533 . T . PASS END=26686536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,43,255:13,0 chr1 26686537 . C . PASS END=26686540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 26688142 . T . PASS END=26688143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,70:0,6,70:2,0 chr1 26688144 . A . PASS END=26688152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 26688153 . G . PASS END=26688175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 26688176 . G . PASS END=26688176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 26688177 . T . PASS END=26688180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:11,0 chr1 26688181 . G C, 80.11 PASS DP=11;MQ=248.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,8,0:0,3,0:30:118,33,0,423,33,423:255,33,0:0,0:8.0110e+01,3.0110e+01,4.2373e-03,4.1963e+02,6.4880e+01,4.2264e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,4:0,0,8,3 chr1 26688182 . G . PASS END=26688186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:12,0 chr1 26688187 . G . PASS END=26688210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,643:0,51,255:19,0 chr1 26688211 . C . PASS END=26688218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 26688219 . A . PASS END=26688222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 26688223 . C . PASS END=26688239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 26688240 . C . PASS END=26688247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 26688248 . T . PASS END=26688248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 26688249 . C . PASS END=26688298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:24,0 chr1 26688299 . T . PASS END=26688299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 26688300 . G . PASS END=26688310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 26688311 . G . PASS END=26688311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 26688312 . C . PASS END=26688313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 26688314 . A . PASS END=26688314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:21,0 chr1 26688315 . G . PASS END=26688315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 26688316 . G . PASS END=26688318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,810:0,59,255:20,0 chr1 26688319 . G . PASS END=26688324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:21,0 chr1 26688325 . A . PASS END=26688326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 26688327 . A . PASS END=26688328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 26688329 . G . PASS END=26688329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:21,0 chr1 26688330 . C . PASS END=26688331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 26688332 . A . PASS END=26688332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 26688333 . G . PASS END=26688338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:23,0 chr1 26688339 . G . PASS END=26688339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 26688340 . C . PASS END=26688357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,931:0,62,255:25,0 chr1 26688358 . A . PASS END=26688358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:23,0 chr1 26688359 . C . PASS END=26688359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:22,0 chr1 26688360 . A . PASS END=26688362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 26688363 . G . PASS END=26688364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:30,0 chr1 26688365 . T . PASS END=26688365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 26688366 . G . PASS END=26688373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1074:0,93,255:31,0 chr1 26688374 . T . PASS END=26688374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 26688375 . G . PASS END=26688513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1271:0,83,255:40,0 chr1 26688607 . C . PASS END=26688666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,171,255:40,0 chr1 26689517 . C . PASS END=26689635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1155:0,90,255:40,1 chr1 26689636 . G . PASS END=26689645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:25,0 chr1 26691023 . C . PASS END=26691026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 26691027 . A . LowGQ END=26691027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 26691028 . G . PASS END=26691031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 26691032 . G . PASS END=26691033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 26691034 . A . PASS END=26691036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 26691037 . G . PASS END=26691037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 26691038 . C . PASS END=26691038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 26691039 . T . PASS END=26691039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 26691040 . G . PASS END=26691058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,493:0,48,255:19,0 chr1 26691059 . T . PASS END=26691066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:24,0 chr1 26691067 . A . PASS END=26691067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 26691068 . C . PASS END=26691083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,789:0,72,255:24,0 chr1 26691084 . C . PASS END=26691084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 26691085 . C . PASS END=26691086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 26691087 . T . PASS END=26691087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 26691088 . T . PASS END=26691088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 26691089 . C . PASS END=26691089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 26691090 . T . PASS END=26691099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,856:0,72,255:24,0 chr1 26691100 . G . PASS END=26691100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:21,0 chr1 26691101 . C . PASS END=26691112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 26691113 . G . PASS END=26691123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 26691124 . C . PASS END=26691124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 26691125 . T . PASS END=26691125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 26691126 . G . PASS END=26691133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,675:0,60,255:21,0 chr1 26691134 . A . PASS END=26691134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 26691135 . C . PASS END=26691135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26691136 . T . PASS END=26691136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 26691137 . C . PASS END=26691141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26691142 . G . PASS END=26691178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 26691179 . C . PASS END=26691180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 26691181 . G . PASS END=26691189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26691190 . A . PASS END=26691198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 26691199 . G . PASS END=26691199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 26691200 . G . PASS END=26691211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,32,255:13,0 chr1 26691212 . A . PASS END=26691231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 26691232 . A . PASS END=26691232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 26691233 . A . PASS END=26691244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,562:0,48,255:17,0 chr1 26691245 . G . PASS END=26691245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 26691246 . C . PASS END=26691247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 26691248 . A . PASS END=26691248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 26691249 . G . PASS END=26691252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26691253 . C . PASS END=26691254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr1 26691255 . T . PASS END=26691255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26691256 . G . PASS END=26691256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 26691257 . G . PASS END=26691258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26691259 . A . PASS END=26691261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 26691262 . C . PASS END=26691262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 26691263 . C . PASS END=26691290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 26691291 . C . PASS END=26691291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 26691292 . G . PASS END=26691310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 26691311 . C . PASS END=26691311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 26691312 . T . PASS END=26691312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 26691313 . C . PASS END=26691313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 26691314 . A . PASS END=26691318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 26691319 . C . PASS END=26691319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 26691320 . C . PASS END=26691321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 26691322 . T . PASS END=26691322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 26691323 . C . PASS END=26691356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr1 26691357 . G . PASS END=26691379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 26691380 . G . PASS END=26691463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr1 26691464 . G . PASS END=26691474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 26691475 . G . PASS END=26691475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 26691476 . A . PASS END=26691494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,584:0,51,255:18,0 chr1 26691495 . A . PASS END=26691495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:16,0 chr1 26691496 . T . PASS END=26691500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 26691501 . T . PASS END=26691501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,536:0,15,255:15,0 chr1 26691502 . T . PASS END=26691513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 26691514 . A . PASS END=26691514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 26691515 . G . PASS END=26691525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,552:0,45,255:17,0 chr1 26691526 . C . PASS END=26691526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 26691527 . C . PASS END=26691528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 26691529 . A . PASS END=26691529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,513:0,12,255:16,0 chr1 26691530 . G . PASS END=26691544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,554:0,51,255:19,0 chr1 26691545 . T . PASS END=26691545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 26691546 . C . PASS END=26691546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 26691547 . T . PASS END=26691547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26691548 . G . PASS END=26691548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26691549 . T . PASS END=26691556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr1 26691557 . C . PASS END=26691557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:17,0 chr1 26691558 . G . PASS END=26691558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 26691559 . G . PASS END=26691568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 26691569 . A . PASS END=26691572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 26691573 . C . PASS END=26691573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 26691574 . T . PASS END=26691574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 26691575 . G . PASS END=26691577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 26691578 . A . PASS END=26691578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 26691579 . T . PASS END=26691588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,709:0,66,255:25,0 chr1 26691589 . A . PASS END=26691596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:29,0 chr1 26691597 . C . PASS END=26691597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 26691598 . A . PASS END=26691613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 26691614 . A . PASS END=26691615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:25,0 chr1 26691616 . C . PASS END=26691617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26691618 . C . PASS END=26691625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 26691626 . C . PASS END=26691626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26691627 . T . PASS END=26691629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:28,0 chr1 26691630 . T . PASS END=26691640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 26691641 . G . PASS END=26691641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 26691642 . T . PASS END=26691650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 26691651 . T . PASS END=26691651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 26691652 . G . PASS END=26691677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,948:0,84,255:28,0 chr1 26691678 . T . PASS END=26691678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 26691679 . C . PASS END=26691679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26691680 . A . PASS END=26691699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:24:0,66,978:0,67,255:26,0 chr1 26691700 . G . PASS END=26691717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:20:0,43,675:0,43,255:21,0 chr1 26694084 . T . PASS END=26694088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:25,0 chr1 26694089 . C . PASS END=26694089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 26694090 . T . PASS END=26694091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 26694092 . A . PASS END=26694092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 26694093 . A . PASS END=26694095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 26694096 . C . PASS END=26694096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 26694097 . G . PASS END=26694099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:26,0 chr1 26694100 . C . PASS END=26694109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:30,0 chr1 26694110 . C . PASS END=26694110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 26694111 . C . PASS END=26694112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1155:0,90,255:33,0 chr1 26694113 . T . PASS END=26694173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1151:0,85,255:34,0 chr1 26694174 . G . PASS END=26694190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,74,255:25,0 chr1 26694191 . G . PASS END=26694207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:28,0 chr1 26694208 . G . PASS END=26694238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 26694239 . G . PASS END=26694244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 26694245 . T C, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,21,0:1.000,0.000:21:0,7,0:0,14,0:60:148,63,0,806,63,806:255,66,0:0,0:1.1020e+02,6.0201e+01,4.1418e-06,4.5000e+02,9.4971e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,12:0,0,15,6:26694245 chr1 26694246 . G . PASS END=26694247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 26694248 . G . PASS END=26694248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:16,0 chr1 26694249 . C . PASS END=26694259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:16,0 chr1 26694260 . T C, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,17,0:1.000,0.000:17:0,5,0:0,12,0:48:136,51,0,656,51,656:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,11:0,0,14,3:26694245 chr1 26694261 . C . PASS END=26694261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 26694262 . T . PASS END=26694264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26694265 . A . PASS END=26694288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:13,0 chr1 26694949 . C . PASS END=26694951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 26694952 . G . PASS END=26694952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:22,0 chr1 26694953 . T . PASS END=26694971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr1 26694972 . A . PASS END=26694974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26694975 . C . PASS END=26694975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 26694976 . C . PASS END=26695076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:83:29:0,83,1156:0,83,255:40,0 chr1 26699026 . C . PASS END=26699038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:38:0,85,1435:0,85,255:38,0 chr1 26700769 . C . PASS END=26700781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1064:0,90,255:30,0 chr1 26737383 . A . PASS END=26737406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1127:0,82,255:33,0 chr1 26737407 . T . PASS END=26737407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,849:0,46,255:28,0 chr1 26737408 . T . PASS END=26737412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 26737413 . G . PASS END=26737413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:30,0 chr1 26737877 . G . PASS END=26737893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,787:0,62,255:26,0 chr1 26737894 . G . PASS END=26737904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 26737905 . G . PASS END=26737905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 26737906 . C . PASS END=26737909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 26737910 . A . PASS END=26737915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 26737916 . C . PASS END=26737922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 26737923 . G . PASS END=26737923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 26737924 . G . PASS END=26737929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 26737930 . G . PASS END=26737930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr1 26737931 . C . PASS END=26737933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 26737934 . G . PASS END=26737934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:32:31:0,32,1010:0,32,255:27,0 chr1 26737935 . G . PASS END=26737975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:31:0,80,1172:0,80,255:40,0 chr1 26737976 . G . PASS END=26737976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1441:0,76,255:36,0 chr1 26737977 . T . PASS END=26738009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1376:0,103,255:36,0 chr1 26738010 . C . PASS END=26738022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:68:28:0,68,1006:0,68,255:26,0 chr1 26738023 . G . PASS END=26738023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,892:0,7,255:24,0 chr1 26738024 . C . PASS END=26738024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 26738025 . C . PASS END=26738025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:24,0 chr1 26738026 . C . PASS END=26738030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 26738031 . C . PASS END=26738031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 26738032 . G . PASS END=26738032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 26738033 . G . PASS END=26738033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 26738034 . G . PASS END=26738040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 26738041 . C . PASS END=26738041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 26738042 . T . PASS END=26738052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 26738053 . G . PASS END=26738073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,50,255:19,0 chr1 26751794 . A . PASS END=26751964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1197:0,90,255:40,0 chr1 26751965 . T . PASS END=26751975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr1 26751976 . C . PASS END=26751978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr1 26752733 . G . PASS END=26752771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1049:0,84,255:39,0 chr1 26752772 . A . PASS END=26752772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 26752773 . T . PASS END=26752935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:33:0,84,1260:0,99,255:40,0 chr1 26752936 . A . PASS END=26752949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1025:0,73,255:26,0 chr1 26758780 . C . PASS END=26758780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 26759400 . G . PASS END=26759400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 26759437 . A . PASS END=26759499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,108,1620:0,111,255:40,0 chr1 26764659 . G . PASS END=26764749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,102,1429:0,102,255:40,0 chr1 26764750 . C . PASS END=26764750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:33,0 chr1 26764751 . A . PASS END=26764764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:34,0 chr1 26764765 . A . PASS END=26764765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1150:0,71,255:31,0 chr1 26764766 . G . PASS END=26764770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 26764771 . C . PASS END=26764772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 26764773 . G . PASS END=26764775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 26769207 . C . PASS END=26769210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 26769211 . T . PASS END=26769211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 26769212 . C . PASS END=26769215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:19,0 chr1 26769216 . T . PASS END=26769224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:24,0 chr1 26769225 . C . PASS END=26769225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 26769226 . T . PASS END=26769226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 26769227 . G . PASS END=26769227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 26769228 . C . PASS END=26769228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 26769229 . G . PASS END=26769233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:31,0 chr1 26769234 . T . PASS END=26769234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 26769235 . G . PASS END=26769269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1180:0,85,255:39,0 chr1 26769270 . G . PASS END=26769270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 26769271 . C . PASS END=26769338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1159:0,87,255:38,0 chr1 26769339 . A . PASS END=26769349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 26769350 . C . PASS END=26769350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 26769351 . T . PASS END=26769364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,870:0,64,255:26,0 chr1 26772807 . G . PASS END=26772911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1025:0,87,255:40,0 chr1 26772912 . G . PASS END=26772923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,897:0,67,255:25,0 chr1 26774050 . G . PASS END=26774239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:87:32:0,87,1174:0,96,255:40,0 chr1 26784282 . T . PASS END=26784287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 26784288 . C . PASS END=26784288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26784289 . T . PASS END=26784289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 26784290 . C . PASS END=26784294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26784295 . T . PASS END=26784295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26784296 . C . PASS END=26784396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,994:0,81,255:40,0 chr1 26786528 . A . PASS END=26786530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,120,1407:0,120,255:40,0 chr1 26786531 . T . PASS END=26786531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1386:0,66,255:40,0 chr1 26786532 . C . PASS END=26786622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,95,255:40,0 chr1 26786623 . T . PASS END=26786625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 26786626 . C . PASS END=26786627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 26786628 . T . PASS END=26786628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 26786629 . G . PASS END=26786629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,958:0,43,255:24,0 chr1 26786630 . C . PASS END=26786630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26786631 . T . PASS END=26786635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 26793784 . C . PASS END=26793785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:18,0 chr1 26793786 . C . PASS END=26793788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 26793789 . A . PASS END=26793789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 26793790 . G . PASS END=26793802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,892:0,69,255:26,0 chr1 26793803 . C . PASS END=26793808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:30,0 chr1 26793809 . C . PASS END=26793809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 26793810 . C . PASS END=26793812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 26793813 . G . PASS END=26793813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 26793814 . A . PASS END=26793815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 26793816 . G . PASS END=26793816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 26793817 . A . PASS END=26793819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 26793820 . C . PASS END=26793820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 26793821 . C . PASS END=26793833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,93,255:31,0 chr1 26793834 . C . PASS END=26793834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 26793835 . G . PASS END=26793836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 26793837 . A . PASS END=26793837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 26793838 . G . PASS END=26793841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 26793842 . T . PASS END=26793842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1076:0,55,255:27,0 chr1 26793843 . C . PASS END=26793843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 26793844 . T . PASS END=26793846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 26793847 . G . PASS END=26793847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 26793848 . G . PASS END=26793849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 26793850 . A . PASS END=26793876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,67,255:26,0 chr1 26795381 . A . PASS END=26795381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 26795383 . C . PASS END=26795388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 26795389 . G . PASS END=26795389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 26795390 . C . PASS END=26795392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,588:0,48,255:16,0 chr1 26795393 . G . PASS END=26795393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 26795394 . A . PASS END=26795394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 26795395 . G . PASS END=26795395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 26795396 . A . PASS END=26795396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,454:0,9,255:15,0 chr1 26795397 . C . PASS END=26795398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 26795399 . T . PASS END=26795399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:16,0 chr1 26795400 . G . PASS END=26795404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 26795405 . C . PASS END=26795405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 26795406 . A . PASS END=26795406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 26795407 . G . PASS END=26795407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 26795408 . A . PASS END=26795408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 26795409 . G . PASS END=26795409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:15,0 chr1 26795410 . G . PASS END=26795410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 26795411 . A . PASS END=26795411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 26795412 . G . PASS END=26795415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 26795416 . A . PASS END=26795416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:15,0 chr1 26795417 . A . PASS END=26795417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26795418 . G . PASS END=26795418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 26795419 . A . PASS END=26795473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,582:0,41,255:19,0 chr1 26795474 . G . PASS END=26795476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 26795477 . T . PASS END=26795477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:12,0 chr1 26795478 . C . PASS END=26795486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 26795487 . T . PASS END=26795507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 26795508 . G . PASS END=26795547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,158:6,0 chr1 26795548 . G . PASS END=26795563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 26795564 . A . PASS END=26795564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 26795565 . G . PASS END=26795576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 26795577 . C . PASS END=26795596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 26795597 . C . PASS END=26795622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:8,0 chr1 26795677 . C . PASS END=26795677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 26795731 . C . PASS END=26795731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 26795750 . C . PASS END=26795750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26795796 . G . PASS END=26795796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 26795832 . C . PASS END=26795832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 26795848 . C . PASS END=26795848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:32,0 chr1 26795883 . A . PASS END=26795883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,104,255:33,0 chr1 26795934 . C . PASS END=26795934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 26796026 . C . PASS END=26796026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26796055 . T . PASS END=26796055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 26796086 . T . PASS END=26796086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 26796102 . A . PASS END=26796102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 26796137 . G . PASS END=26796137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 26796195 . C . PASS END=26796195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 26796242 . C . PASS END=26796242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 26796256 . G . PASS END=26796256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 26796306 . T . PASS END=26796306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 26796355 . T . PASS END=26796355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 26796359 . C . PASS END=26796359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 26796391 . G . PASS END=26796391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 26796505 . C . PASS END=26796505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26796608 . T . PASS END=26796608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 26796610 . C . PASS END=26796610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 26796799 . C . PASS END=26796800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:42:33:0,42,630:0,66,255:14,0 chr1 26796803 . C . PASS END=26796803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:36:33:0,36,540:0,98,255:12,0 chr1 26796965 . C . PASS END=26796965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 26797053 . C . PASS END=26797053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 26797061 . C . PASS END=26797061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 26797086 . C . PASS END=26797086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 26797119 . C . PASS END=26797119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 26797193 . A . PASS END=26797193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26797196 . C . PASS END=26797196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 26797327 . G . PASS END=26797327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,907:0,75,255:25,0 chr1 26797391 . G . PASS END=26797391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 26797448 . A . PASS END=26797448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:18,0 chr1 26797617 . C . PASS END=26797617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 26797667 . T . PASS END=26797667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 26797691 . A . PASS END=26797691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 26797726 . A . PASS END=26797726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr1 26799104 . A . PASS END=26799106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 26799107 . C . PASS END=26799108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 26799109 . C . PASS END=26799118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 26799974 . G . PASS END=26799978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1205:0,86,255:32,0 chr1 26799979 . A . PASS END=26799979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 26799980 . G . PASS END=26799980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:30,0 chr1 26799981 . G . PASS END=26799995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1233:0,86,255:35,0 chr1 26799996 . A . PASS END=26799996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1169:0,72,255:32,0 chr1 26799997 . T . PASS END=26800018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1147:0,80,255:32,0 chr1 26800194 . C . PASS END=26800223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,132,255:40,0 chr1 26800576 . A . PASS END=26800626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,164,255:40,0 chr1 26801063 . A . PASS END=26801155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,86,255:40,0 chr1 26801156 . C . PASS END=26801158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 26801604 . G . PASS END=26801639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,147,255:40,0 chr1 26845506 . C . PASS END=26845506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr1 26856412 . A . PASS END=26856424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 26856425 . A . PASS END=26856450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 26856451 . G . PASS END=26856455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 26856456 . A . PASS END=26856461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 26856462 . T G, 21.74 PASS DP=7;MQ=248.05;MQRankSum=1.495;ReadPosRankSum=1.495;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,2,0:0.286,0.000:7:4,1,0:1,1,0:22:56,0,50,72,179,250:56,0,165:5,0:2.1741e+01,2.9203e-02,5.3029e+01,7.1560e+01,2.1360e+02,2.5336e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,0,2:3,2,1,1 chr1 26856463 . C . PASS END=26856466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 26856467 . A . PASS END=26856467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 26856468 . C . PASS END=26856474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 26857236 . A . PASS END=26857263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,553:0,41,255:19,0 chr1 26857264 . C . PASS END=26857273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 26857274 . A . PASS END=26857314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:18,0 chr1 26857315 . T . PASS END=26857315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 26857316 . G . PASS END=26857332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 26857333 . C . PASS END=26857343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 26863416 . A . PASS END=26863460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1291:0,95,255:39,0 chr1 26869653 . A . PASS END=26869653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 26869654 . T . PASS END=26869654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 26869655 . G . PASS END=26869678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,892:0,61,255:27,0 chr1 26869679 . G . PASS END=26869689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1010:0,87,255:31,0 chr1 26869690 . A . PASS END=26869690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,986:0,46,255:29,0 chr1 26869691 . C . PASS END=26869691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 26869692 . T . PASS END=26869692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 26869693 . T . PASS END=26869699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 26869700 . C . PASS END=26869711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr1 26869712 . G . PASS END=26869712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 26870566 . G . PASS END=26870568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 26870569 . C . PASS END=26870578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 26870579 . A . PASS END=26870579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,976:0,70,255:27,0 chr1 26870580 . A . PASS END=26870582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:32,0 chr1 26870583 . C . PASS END=26870583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr1 26870584 . A . PASS END=26870598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1158:0,85,255:36,0 chr1 26870599 . A . PASS END=26870599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:36,0 chr1 26870600 . C . PASS END=26870668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1305:0,93,255:40,0 chr1 26870669 . G . PASS END=26870669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:29,0 chr1 26872392 . A . PASS END=26872434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 26872435 . T . PASS END=26872435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 26872436 . G . PASS END=26872462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 26872463 . G . PASS END=26872478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 26872479 . A . PASS END=26872483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 26872484 . T . PASS END=26872526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr1 26873358 . G . PASS END=26873377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:97:39:0,97,1451:0,97,255:40,0 chr1 26873378 . G C, 49.93 PASS DP=46;MQ=250.00;MQRankSum=5.794;ReadPosRankSum=2.650;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,22,0:0.478,0.000:46:9,13,0:15,9,0:48:85,0,50,786,770,1557:255,0,255:24,0:4.9932e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,7,7,15:12,12,12,10 chr1 26873379 . A . PASS END=26873415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,120,1770:0,120,255:40,0 chr1 26873416 . A . PASS END=26873474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:46:0,120,1800:0,121,255:40,0 chr1 26873680 . G . PASS END=26873756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,89,255:37,0 chr1 26873757 . G . PASS END=26873761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:34:0,63,1125:0,63,255:26,0 chr1 26877888 . T . PASS END=26877893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1111:0,87,255:31,0 chr1 26877894 . A . PASS END=26877894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 26877895 . C . PASS END=26877910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1166:0,93,255:33,0 chr1 26877911 . A . PASS END=26877911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1058:0,69,255:31,0 chr1 26877912 . T . PASS END=26877947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1033:0,82,255:33,0 chr1 26877948 . T . PASS END=26877948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 26877949 . C . PASS END=26877968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 26877972 . A . PASS END=26877972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 26878135 . C . PASS END=26878214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:38:0,88,1502:0,88,255:40,0 chr1 26879309 . G . PASS END=26879334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr1 26879335 . T . PASS END=26879335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 26879336 . A . PASS END=26879346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 26879347 . A . PASS END=26879347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 26879348 . G . PASS END=26879354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,74,255:24,0 chr1 26879355 . T . PASS END=26879369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:19:0,42,630:0,55,255:19,0 chr1 26879370 . C . PASS END=26879380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:16:0,33,495:0,43,255:12,0 chr1 26879381 . T . PASS END=26879381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,411:0,25,255:10,0 chr1 26879382 . C . PASS END=26879382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 26879383 . T . PASS END=26879383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:10,0 chr1 26879384 . A . PASS END=26879384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 26879385 . T . PASS END=26879385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 26879386 . A . PASS END=26879386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,349:0,6,255:10,0 chr1 26879387 . G . PASS END=26879387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr1 26879882 . G . PASS END=26879882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 26879883 . T . PASS END=26879919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:33:0,89,1254:0,89,255:40,0 chr1 26879920 . T C, 49.96 PASS DP=45;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=4.757;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:11,12,0:12,10,0:48:85,0,50,787,823,1610:255,0,255:23,0:4.9956e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,10,12:14,9,10,12 chr1 26879921 . G . PASS END=26879957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,102,1530:0,103,255:40,0 chr1 26879958 . G . PASS END=26879972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:33,0 chr1 26879973 . A . PASS END=26879973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr1 26879974 . C . PASS END=26879974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26879975 . C . PASS END=26879975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 26879976 . T . PASS END=26879976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26879977 . C . PASS END=26879988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 26880705 . C . PASS END=26880740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 26880741 . T . PASS END=26880741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 26880742 . G . PASS END=26880742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 26881087 . A . PASS END=26881090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 26881091 . T . PASS END=26881092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 26881093 . G . PASS END=26881102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:31,0 chr1 26881103 . A . PASS END=26881103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 26881104 . G . PASS END=26881124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1107:0,83,255:34,0 chr1 26881125 . A . PASS END=26881125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:21:34:0,21,814:0,21,255:28,0 chr1 26881126 . A . PASS END=26881169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1211:0,81,255:36,0 chr1 26881170 . G . PASS END=26881170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:28,0 chr1 26881171 . T . PASS END=26881175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 26881176 . A . PASS END=26881176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 26881177 . A . PASS END=26881177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 26881178 . C . PASS END=26881178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 26881179 . C . PASS END=26881180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 26881181 . C . PASS END=26881181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:28,0 chr1 26881182 . C . PASS END=26881182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 26881183 . A . PASS END=26881183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 26881184 . G . PASS END=26881184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 26881185 . G . PASS END=26881202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,65,255:26,0 chr1 26881203 . G . PASS END=26881203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 26881204 . A . PASS END=26881206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 26881207 . G . PASS END=26881207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 26881208 . G . PASS END=26881213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 26881214 . C . PASS END=26881214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 26881215 . T . PASS END=26881217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 26881218 . G . PASS END=26881229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr1 26881642 . T . PASS END=26881647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,719:0,66,255:22,0 chr1 26881648 . A . PASS END=26881648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,660:0,49,255:20,0 chr1 26881649 . T . PASS END=26881691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,754:0,63,255:25,0 chr1 26881692 . G . PASS END=26881692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr1 26881693 . A . PASS END=26881702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,856:0,61,255:24,0 chr1 26881703 . T . PASS END=26881703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 26881704 . G . PASS END=26881706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 26881707 . T . PASS END=26881707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 26881708 . C . PASS END=26881712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 26882028 . G . PASS END=26882028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 26882029 . G . PASS END=26882031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 26882032 . A . PASS END=26882050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:23,0 chr1 26882051 . T . PASS END=26882051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 26882052 . T . PASS END=26882064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr1 26882065 . G . PASS END=26882065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 26882066 . C . PASS END=26882070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,815:0,69,255:23,0 chr1 26882071 . A . PASS END=26882071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:20,0 chr1 26882072 . G . PASS END=26882087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 26882088 . G . PASS END=26882088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 26882089 . T . PASS END=26882107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 26882108 . A . PASS END=26882108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,680:0,30,255:19,0 chr1 26882109 . C . PASS END=26882113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 26882114 . T . PASS END=26882114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 26882115 . C . PASS END=26882116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 26883145 . G . PASS END=26883145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 26883146 . C . PASS END=26883156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 26883157 . A . PASS END=26883157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 26883158 . T . PASS END=26883209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1117:0,80,255:33,0 chr1 26883489 . A . PASS END=26883498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,917:0,78,255:26,0 chr1 26883499 . G . PASS END=26883505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,902:0,84,255:28,0 chr1 26883506 . G . PASS END=26883507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,828:0,67,255:27,0 chr1 26883508 . T . PASS END=26883539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,980:0,84,255:30,0 chr1 26883540 . C . PASS END=26883540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 26883541 . C . PASS END=26883543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 26883544 . A . PASS END=26883544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 26883545 . T . PASS END=26883546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 26883547 . A . PASS END=26883547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 26883548 . C . PASS END=26883573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:29,0 chr1 26883574 . C . PASS END=26883580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1008:0,71,255:26,0 chr1 26883581 . C . PASS END=26883581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26883582 . A . PASS END=26883591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,834:0,64,255:23,0 chr1 26885298 . A . PASS END=26885298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 26885299 . T . PASS END=26885302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 26885303 . C . PASS END=26885304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 26885305 . A . PASS END=26885313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,635:0,51,255:19,0 chr1 26885314 . C . PASS END=26885319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:23:0,61,900:0,61,255:24,0 chr1 26885320 . C . PASS END=26885320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:23,0 chr1 26885321 . G . PASS END=26885328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 26885329 . C . PASS END=26885329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 26885330 . C . PASS END=26885332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 26885333 . C . PASS END=26885334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 26885335 . G . PASS END=26885335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 26885336 . C . PASS END=26885338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 26885339 . T . PASS END=26885339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 26885340 . T . PASS END=26885344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 26885345 . G . PASS END=26885352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 26885353 . C . PASS END=26885353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 26885354 . T . PASS END=26885354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 26885355 . T . PASS END=26885366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:30,0 chr1 26885367 . G . PASS END=26885368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 26885369 . C . PASS END=26885378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 26885379 . A . PASS END=26885379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 26885380 . C . PASS END=26885392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 26885393 . C . PASS END=26885400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:25,0 chr1 26885401 . G . PASS END=26885401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:19,0 chr1 26885402 . C . PASS END=26885402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 26885403 . A . PASS END=26885404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:19,0 chr1 26885405 . G . PASS END=26885405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:18,0 chr1 26885406 . C . PASS END=26885417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr1 26885418 . C . PASS END=26885428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,48,255:13,0 chr1 26887217 . C . PASS END=26887237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1133:0,80,255:35,0 chr1 26887238 . G . PASS END=26887239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:44:37:0,44,1181:0,44,255:35,2 chr1 26887240 . T . PASS END=26887240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:36,0 chr1 26887241 . T . PASS END=26887303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:34:0,81,1215:0,95,255:37,0 chr1 26887304 . T . PASS END=26887304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 26887305 . G . PASS END=26887305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 26887306 . T . PASS END=26887306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 26887307 . G . PASS END=26887310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 26887311 . A . PASS END=26887330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr1 26887331 . T . PASS END=26887331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 26887332 . A . PASS END=26887336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 26887337 . G . PASS END=26887337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 26887338 . T . PASS END=26887342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26887536 . G . PASS END=26887615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:37:0,80,1260:0,80,255:40,0 chr1 26887616 . T . PASS END=26887616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr1 26887617 . C . PASS END=26887621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 26887622 . A . PASS END=26887622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:28,0 chr1 26887623 . G . PASS END=26887623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 26887624 . A . PASS END=26887624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:27,0 chr1 26887625 . T . PASS END=26887625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 26887996 . G . PASS END=26888006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:33,0 chr1 26888007 . T . PASS END=26888007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 26888008 . G . PASS END=26888154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1217:0,86,255:40,0 chr1 26897940 . G . PASS END=26897941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 26897942 . T . PASS END=26897942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:23,0 chr1 26897943 . G . PASS END=26897953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,939:0,62,255:26,0 chr1 26897954 . C . PASS END=26897955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 26897956 . T . PASS END=26897956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 26897957 . G . PASS END=26897958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 26897959 . A . PASS END=26897959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 26897960 . G . PASS END=26897960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 26897961 . C . PASS END=26897977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1041:0,80,255:33,0 chr1 26897978 . T . PASS END=26897978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:32,0 chr1 26897979 . G . PASS END=26898036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1177:0,86,255:38,0 chr1 26898037 . A . PASS END=26898037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1276:0,75,255:35,0 chr1 26898038 . G . PASS END=26898062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1295:0,81,255:37,0 chr1 26898063 . A . PASS END=26898063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:29,0 chr1 26898064 . T . PASS END=26898064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 26898065 . G . PASS END=26898079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,72,255:25,0 chr1 26898080 . A . PASS END=26898080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 26898081 . G . PASS END=26898088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 26898089 . T . PASS END=26898089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 26898090 . G . PASS END=26898092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 26898093 . G . PASS END=26898093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 26898094 . C . PASS END=26898097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 26898098 . T . PASS END=26898101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 26898340 . G . PASS END=26898340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:25,0 chr1 26898341 . T . PASS END=26898343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 26898344 . T . PASS END=26898345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 26898346 . A . PASS END=26898349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,971:0,45,255:27,0 chr1 26898350 . G . PASS END=26898351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26898352 . C . PASS END=26898353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 26898354 . G . PASS END=26898355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 26898356 . G . PASS END=26898357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 26898358 . T . PASS END=26898358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:27,0 chr1 26898359 . A . PASS END=26898359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:29,0 chr1 26898360 . C . PASS END=26898392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr1 26898393 . T . PASS END=26898406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:24:0,66,878:0,72,255:24,0 chr1 26898407 . T . PASS END=26898407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 26898408 . G . PASS END=26898416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 26898667 . A . PASS END=26898784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,118,1538:0,118,255:40,0 chr1 26899715 . G . PASS END=26899716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 26899717 . C . PASS END=26899717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 26899718 . C . PASS END=26899718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 26899719 . T . PASS END=26899734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr1 26899735 . A . PASS END=26899770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:23,0 chr1 26899771 . G . PASS END=26899771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 26899772 . G . PASS END=26899778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,815:0,69,255:23,0 chr1 26899779 . A . PASS END=26899781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 26899782 . A . PASS END=26899788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 26899789 . G . PASS END=26899789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 26899790 . G . PASS END=26899830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,725:0,63,255:23,0 chr1 26899831 . C . PASS END=26899845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,659:0,41,255:19,0 chr1 26899846 . T . PASS END=26899846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:16,0 chr1 26899847 . G . PASS END=26899852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 26900570 . G . PASS END=26900575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 26900576 . A . LowGQ END=26900576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 26900577 . T . PASS END=26900579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 26900580 . C . PASS END=26900586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr1 26900587 . G . PASS END=26900587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 26900588 . T . PASS END=26900594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,607:0,40,255:18,0 chr1 26900595 . C . PASS END=26900595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:17,0 chr1 26900596 . A . PASS END=26900596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,613:0,40,255:18,0 chr1 26900597 . C . PASS END=26900629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:25,0 chr1 26900630 . C . PASS END=26900637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 26900638 . G . PASS END=26900670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,955:0,65,255:26,0 chr1 26900671 . G . PASS END=26900687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,939:0,64,255:26,0 chr1 26900688 . T . PASS END=26900688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:23,0 chr1 26900689 . G . PASS END=26900692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:24,0 chr1 26900868 . G . PASS END=26900880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1341:0,81,255:38,0 chr1 26900881 . C . PASS END=26900881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 26900882 . G . PASS END=26900882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 26900883 . G . PASS END=26900905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1412:0,101,255:39,0 chr1 26900906 . C . PASS END=26900906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1347:0,62,255:36,0 chr1 26900907 . G . PASS END=26900919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,99,1382:0,101,255:38,0 chr1 26900920 . A T, 47.88 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=0.219;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,17,0:0.425,0.000:40:12,7,0:11,10,0:47:83,0,50,559,823,1382:255,0,255:22,0:4.7883e+01,9.2414e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,6,11:17,6,8,9 chr1 26900921 . A . PASS END=26900923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:36:0,101,1388:0,101,255:34,0 chr1 26900924 . T . PASS END=26900924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:32,0 chr1 26900925 . T . PASS END=26900934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1197:0,102,255:34,0 chr1 27022888 . G . PASS END=27022888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 27022895 . A . PASS END=27022927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:8,0 chr1 27022928 . A . PASS END=27022928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 27022929 . G . PASS END=27022931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 27022932 . T . PASS END=27022936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27022937 . A . PASS END=27022937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr1 27022938 . A . PASS END=27022944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 27022945 . G . PASS END=27022945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr1 27022946 . C . PASS END=27022949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27022950 . C . PASS END=27022957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:11,0 chr1 27022958 . T . PASS END=27022958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 27022959 . C . PASS END=27022962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 27022963 . G . PASS END=27022963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 27022964 . C . PASS END=27022969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27022970 . A . PASS END=27022970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 27022971 . A . PASS END=27022975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 27022976 . G . PASS END=27022977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 27022978 . G . PASS END=27022979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 27022980 . A . LowGQ END=27022980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:9,0 chr1 27022981 . G . PASS END=27022982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 27022983 . A . PASS END=27022990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 27022991 . G . PASS END=27022991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 27022992 . A . PASS END=27022997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr1 27022998 . C . PASS END=27022998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:5,0 chr1 27022999 . G . PASS END=27022999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 27023000 . G . PASS END=27023006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 27023007 . A . PASS END=27023007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:4,0 chr1 27023008 . G . PASS END=27023072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 27023073 . G . PASS END=27023075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27023076 . C . LowGQ END=27023076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,255:12,0,255:8,0 chr1 27023077 . C . PASS END=27023077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27023078 . G . PASS END=27023078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 27023079 . C . PASS END=27023097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 27023098 . G . PASS END=27023104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 27023105 . A . PASS END=27023107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27023108 . G . PASS END=27023111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27023112 . T . PASS END=27023115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 27023116 . G . PASS END=27023118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 27023119 . C . PASS END=27023119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 27023120 . G . PASS END=27023125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 27023126 . G . PASS END=27023126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr1 27023127 . A . PASS END=27023127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27023128 . G . PASS END=27023128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 27023129 . A . PASS END=27023130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 27023131 . C . PASS END=27023131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:6,0 chr1 27023132 . A . PASS END=27023139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 27023140 . T . PASS END=27023140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 27023141 . G . PASS END=27023152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 27023153 . G . PASS END=27023154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 27023155 . A . PASS END=27023165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:8,0 chr1 27023166 . G . PASS END=27023167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:4:7:0,4,216:0,4,216:7,0 chr1 27023168 . G . PASS END=27023179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 27023180 . G . PASS END=27023180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 27023181 . C . PASS END=27023188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 27023189 . G . PASS END=27023198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 27023199 . A . LowGQ END=27023199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 27023200 . C . PASS END=27023200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27023201 . T . PASS END=27023206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 27023207 . G . PASS END=27023207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 27023208 . G . PASS END=27023208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 27023209 . G . PASS END=27023209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 27023210 . A . PASS END=27023211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 27023212 . C . PASS END=27023213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27023214 . C . LowGQ END=27023214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:3,0,255:8,0 chr1 27023215 . G . PASS END=27023221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 27023222 . A . PASS END=27023222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 27023223 . G . PASS END=27023232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 27023233 . G . PASS END=27023233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 27023234 . A . PASS END=27023238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27023239 . T . PASS END=27023241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 27023242 . C . PASS END=27023249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 27023250 . A . LowGQ END=27023250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:7,0 chr1 27023251 . G . PASS END=27023251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 27023252 . C . PASS END=27023274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr1 27023275 . C . PASS END=27023277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 27023278 . C . PASS END=27023279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 27023280 . G . PASS END=27023283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 27023284 . T . PASS END=27023296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,225:6,0 chr1 27023297 . C . PASS END=27023298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27023299 . T . PASS END=27023334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 27023335 . C . PASS END=27023335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 27023336 . T . PASS END=27023433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,337:0,33,255:13,0 chr1 27023434 . C . PASS END=27023436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:8,0 chr1 27023437 . G . PASS END=27023440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 27023441 . G . PASS END=27023446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:7,0 chr1 27023447 . C . PASS END=27023452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:10,0 chr1 27023453 . G . LowGQ END=27023453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 27023454 . G . PASS END=27023466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 27023467 . C . PASS END=27023467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 27023468 . C . PASS END=27023487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 27023488 . C . PASS END=27023488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27023489 . C . PASS END=27023489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27023490 . A . PASS END=27023494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 27023495 . A . PASS END=27023495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,312:0,2,255:9,0 chr1 27023496 . A . PASS END=27023500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 27023501 . C . PASS END=27023537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr1 27023538 . A . PASS END=27023538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 27023539 . C . PASS END=27023570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr1 27023571 . C . PASS END=27023571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 27023572 . C . PASS END=27023573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27023574 . C . PASS END=27023574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 27023575 . G . PASS END=27023576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27023577 . C . PASS END=27023577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 27023578 . C . PASS END=27023579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 27023580 . A . PASS END=27023580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:13,0 chr1 27023581 . C . PASS END=27023581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27023582 . G . PASS END=27023610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:31:13:0,31,415:0,31,255:13,1 chr1 27023611 . G . PASS END=27023611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr1 27023612 . G . PASS END=27023621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 27023622 . C . PASS END=27023622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 27023623 . G . PASS END=27023627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 27023628 . C . PASS END=27023628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 27023629 . G . PASS END=27023646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:17,0 chr1 27023647 . G . PASS END=27023647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,523:0,20,255:15,0 chr1 27023648 . C . PASS END=27023653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 27023654 . T . PASS END=27023654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:15,0 chr1 27023655 . C . PASS END=27023656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27023657 . T . PASS END=27023657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 27023658 . C . PASS END=27023677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 27023678 . T . PASS END=27023678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 27023679 . C . PASS END=27023706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 27023707 . C . PASS END=27023730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 27023731 . C . PASS END=27023733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 27023734 . C . PASS END=27023734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 27023735 . G . PASS END=27023740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 27023741 . G . PASS END=27023741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 27023742 . G . PASS END=27023749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 27023750 . A . PASS END=27023771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,31,255:13,0 chr1 27023772 . C . PASS END=27023772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 27023773 . C . PASS END=27023777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 27023778 . T . PASS END=27023778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 27023779 . C . PASS END=27023792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:11,0 chr1 27023793 . C . PASS END=27023794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 27023795 . T . PASS END=27023796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27023797 . G . PASS END=27023797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 27023798 . C . PASS END=27023805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 27023806 . G . LowGQ END=27023806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:10,0 chr1 27023807 . G . PASS END=27023810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 27023811 . G . PASS END=27023811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 27023812 . G . PASS END=27023821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:12,0 chr1 27023822 . G . PASS END=27023823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 27023824 . C . PASS END=27023827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 27023828 . C . PASS END=27023828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 27023829 . C . PASS END=27023841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 27023842 . C . PASS END=27023842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 27023843 . A . PASS END=27023869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,429:0,39,255:13,0 chr1 27023870 . G . PASS END=27023870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 27023871 . G . PASS END=27023882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 27023883 . C . PASS END=27023883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 27023884 . G . PASS END=27023888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27023889 . T . PASS END=27023889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 27023890 . G . PASS END=27023890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27023891 . G . PASS END=27023891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 27023892 . C . PASS END=27023896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27023897 . C . PASS END=27023898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:21:14:0,21,315:0,26,255:8,0 chr1 27023899 . G . PASS END=27023910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:14:0,33,495:0,42,255:13,0 chr1 27023911 . T . LowGQ END=27023915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:14:0,0,465:0,0,255:16,2 chr1 27023916 . C . PASS END=27023928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:18,0 chr1 27023929 . G . PASS END=27023929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 27023930 . G . PASS END=27023938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,645:0,44,255:19,0 chr1 27023939 . G . PASS END=27023941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 27023942 . T . PASS END=27023942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 27023943 . C . PASS END=27024001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,792:0,63,255:26,0 chr1 27024002 . G . PASS END=27024002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 27024003 . G . PASS END=27024015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 27024016 . C . PASS END=27024016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 27024017 . G . PASS END=27024017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27024018 . C . PASS END=27024031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:19:0,44,675:0,44,255:19,0 chr1 27056142 . C . PASS END=27056224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1231:0,86,255:40,0 chr1 27056225 . T . PASS END=27056225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1396:0,73,255:31,0 chr1 27056226 . C . PASS END=27056261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,102,255:34,0 chr1 27056262 . C . PASS END=27056263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:25,0 chr1 27056264 . G . PASS END=27056270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 27056271 . G . PASS END=27056304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:25,0 chr1 27056305 . T . PASS END=27056305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 27056306 . G . PASS END=27056310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 27056311 . G . PASS END=27056311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 27056312 . C . PASS END=27056325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,823:0,69,255:23,0 chr1 27056326 . C . PASS END=27056326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 27056327 . C . PASS END=27056335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:22,0 chr1 27056336 . C . PASS END=27056340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 27056341 . C . PASS END=27056352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:21,0 chr1 27056353 . A . PASS END=27056354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27057643 . A . PASS END=27058052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:36:0,80,1280:0,80,255:40,0 chr1 27058053 . C . PASS END=27058053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 27058054 . C . PASS END=27058079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1203:0,91,255:36,0 chr1 27058080 . C . PASS END=27058080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:31,0 chr1 27058081 . T . PASS END=27058092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,92,255:32,0 chr1 27058093 . C . PASS END=27058094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:32:0,78,1170:0,83,255:26,0 chr1 27058095 . G . PASS END=27058095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 27059167 . G . PASS END=27059220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1101:0,82,255:35,0 chr1 27059221 . T . PASS END=27059221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:30,0 chr1 27059222 . C . PASS END=27059267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1166:0,83,255:35,0 chr1 27059268 . A . PASS END=27059283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr1 27059288 . G . PASS END=27059288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 27087347 . G . PASS END=27087360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr1 27087361 . A . PASS END=27087361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 27087362 . A . PASS END=27087365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27087366 . A . PASS END=27087366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 27087367 . T . PASS END=27087381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:21:0,61,739:0,61,255:26,0 chr1 27087382 . G . PASS END=27087382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27087383 . A . PASS END=27087383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 27087384 . C . PASS END=27087386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27087387 . A . PASS END=27087387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,929:0,54,255:26,0 chr1 27087388 . A . PASS END=27087406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:35,0 chr1 27087407 . G . PASS END=27087407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr1 27087408 . T . PASS END=27087529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:32:0,85,1180:0,85,255:40,0 chr1 27087530 . T . PASS END=27087530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1040:0,79,255:29,0 chr1 27087531 . C . PASS END=27087536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 27087537 . C . PASS END=27087549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 27087550 . G . PASS END=27087552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27087553 . T . PASS END=27087559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 27087560 . G . PASS END=27087560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27087561 . G . PASS END=27087561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:26,0 chr1 27087562 . A . PASS END=27087581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:25,0 chr1 27087582 . T . PASS END=27087582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 27087583 . G . PASS END=27087586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 27087587 . G . PASS END=27087587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27087875 . G . PASS END=27087964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:85:34:0,85,1172:0,85,255:40,0 chr1 27088643 . G . PASS END=27088652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:18,0 chr1 27088653 . G . PASS END=27088653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 27088654 . A . PASS END=27088659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,674:0,54,255:19,0 chr1 27088660 . C . PASS END=27088664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27088665 . G . PASS END=27088665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 27088666 . A . PASS END=27088674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:27,0 chr1 27088675 . T . PASS END=27088675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:26,0 chr1 27088676 . A . PASS END=27088676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27088677 . C . PASS END=27088677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 27088678 . A . PASS END=27088687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1172:0,87,255:31,0 chr1 27088688 . A . PASS END=27088688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 27088689 . G . PASS END=27088715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1094:0,80,255:31,0 chr1 27088716 . G . PASS END=27088716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 27088717 . C . PASS END=27088723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1101:0,90,255:31,0 chr1 27088724 . G . PASS END=27088724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1065:0,62,255:30,0 chr1 27088725 . A . PASS END=27088725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 27088726 . G . PASS END=27088726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 27088727 . G . PASS END=27088741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:30,0 chr1 27088742 . G . PASS END=27088742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 27088743 . C . PASS END=27088754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 27088755 . C . PASS END=27088782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 27088783 . C . PASS END=27088790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:22:0,51,765:0,53,255:19,0 chr1 27088791 . G . PASS END=27088791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:17,0 chr1 27088792 . G . PASS END=27088793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:17,0 chr1 27088794 . T . PASS END=27088797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:20:0,32,540:0,32,255:13,0 chr1 27088798 . T . PASS END=27088798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:13,0 chr1 27088799 . A . PASS END=27088807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,498:0,42,255:14,0 chr1 27088808 . A . PASS END=27088809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 27088810 . G . PASS END=27088810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 27089464 . G . PASS END=27089464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 27089465 . T . PASS END=27089465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 27089466 . G . PASS END=27089468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 27089469 . T . PASS END=27089469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 27089470 . A . PASS END=27089495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 27089496 . T . LowGQ END=27089496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 27089497 . T . PASS END=27089505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 27089506 . C . PASS END=27089506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 27089507 . C . PASS END=27089507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 27089508 . A . PASS END=27089512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 27089513 . C . PASS END=27089514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27089515 . C . PASS END=27089515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,441:0,11,255:13,0 chr1 27089516 . C . PASS END=27089516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27089517 . A . PASS END=27089517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 27089518 . G . PASS END=27089520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27089521 . C . PASS END=27089521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:18,0 chr1 27089522 . A . PASS END=27089524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27089525 . C . PASS END=27089529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27089530 . C . PASS END=27089532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 27089533 . G . PASS END=27089542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 27089543 . C . PASS END=27089543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:21,0 chr1 27089544 . C . PASS END=27089553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,852:0,69,255:23,0 chr1 27089554 . C . PASS END=27089554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 27089555 . C . PASS END=27089558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 27089559 . G . PASS END=27089559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 27089560 . G . PASS END=27089569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:25,0 chr1 27089570 . T . PASS END=27089570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 27089571 . G . PASS END=27089588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 27089589 . C . PASS END=27089591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 27089592 . T . PASS END=27089592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 27089593 . A . PASS END=27089595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 27089596 . G . PASS END=27089599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27089600 . A . PASS END=27089602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27089603 . C . PASS END=27089635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 27089636 . C . PASS END=27089636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 27089637 . A . PASS END=27089640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 27089641 . G . PASS END=27089646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27089647 . A . PASS END=27089647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27089648 . T . PASS END=27089649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr1 27089650 . G . PASS END=27089656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,74,255:22,0 chr1 27089657 . C . PASS END=27089668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 27089669 . G . PASS END=27089697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 27089698 . C . PASS END=27089699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:26,0 chr1 27089700 . C . PASS END=27089708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,939:0,78,255:26,0 chr1 27089709 . G . PASS END=27089710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27089711 . C . PASS END=27089714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27089715 . A . PASS END=27089734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:29,0 chr1 27089735 . T . PASS END=27089735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 27089736 . G . PASS END=27089738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr1 27089739 . G . PASS END=27089770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 27089771 . A . PASS END=27089771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 27089772 . A . PASS END=27089776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:23,0 chr1 27092712 . G . PASS END=27092714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 27092715 . G . PASS END=27092715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:29,0 chr1 27092716 . C . PASS END=27092719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:32,0 chr1 27092720 . G . PASS END=27092720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 27092721 . C . PASS END=27092721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:31,0 chr1 27092722 . T . PASS END=27092722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1148:0,63,255:32,0 chr1 27092723 . A . PASS END=27092857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1179:0,88,255:40,0 chr1 27092947 . G . PASS END=27092952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27092953 . G . PASS END=27092954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 27092955 . A . PASS END=27093032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1197:0,83,255:37,0 chr1 27093033 . A . PASS END=27093058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 27094281 . A . PASS END=27094286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 27094287 . A . PASS END=27094287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 27094288 . G . PASS END=27094289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 27094290 . T . PASS END=27094290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 27094291 . C . PASS END=27094472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1141:0,81,255:40,0 chr1 27094473 . A . PASS END=27094473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1084:0,66,255:27,0 chr1 27094474 . T . PASS END=27094490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1172:0,83,255:32,0 chr1 27097610 . G . PASS END=27097610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 27097611 . T . PASS END=27097611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 27097612 . C . PASS END=27097614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,978:0,85,255:33,0 chr1 27097615 . C . PASS END=27097615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:32,0 chr1 27097616 . A . PASS END=27097636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1121:0,85,255:35,0 chr1 27097637 . C . PASS END=27097637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:33,0 chr1 27097638 . T . PASS END=27097640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1279:0,89,255:35,0 chr1 27097641 . C . PASS END=27097641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr1 27097642 . A . PASS END=27097789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1238:0,89,255:40,0 chr1 27097790 . C . PASS END=27097812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 27097813 . T . PASS END=27097813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:21,0 chr1 27097814 . C . PASS END=27097817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:22,0 chr1 27098991 . C . PASS END=27098994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 27098995 . A . PASS END=27098997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 27098998 . A . PASS END=27098998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 27098999 . G . PASS END=27099000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1132:0,93,255:33,0 chr1 27099001 . A . PASS END=27099001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1023:0,49,255:30,0 chr1 27099002 . T . PASS END=27099093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1159:0,84,255:40,0 chr1 27099094 . C . PASS END=27099094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:38,0 chr1 27099095 . A . PASS END=27099123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,101,255:39,0 chr1 27099303 . C . PASS END=27099450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1215:0,80,255:40,0 chr1 27099451 . A . PASS END=27099451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:26,0 chr1 27099452 . A . PASS END=27099454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27099455 . A . PASS END=27099471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:26:0,61,876:0,61,255:24,0 chr1 27099472 . A . PASS END=27099472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 27099473 . G . PASS END=27099475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 27099476 . A . PASS END=27099476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,782:0,25,255:19,0 chr1 27099477 . A . PASS END=27099477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 27099478 . G . PASS END=27099478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 27099483 . C . PASS END=27099483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 27099837 . C . PASS END=27099837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 27099838 . T . LowGQ END=27099838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,266:9,0,255:9,0 chr1 27099839 . C . PASS END=27099849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 27099850 . T . PASS END=27099850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 27099851 . C . PASS END=27099855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27099856 . C . PASS END=27099856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 27099857 . A . PASS END=27099860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 27099861 . C . PASS END=27099869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:16,0 chr1 27099870 . A . PASS END=27099870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 27099871 . G . PASS END=27099871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 27099872 . G . PASS END=27099872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 27099873 . G . PASS END=27099877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr1 27099878 . A . PASS END=27099878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 27099879 . A . PASS END=27099887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 27099888 . T . PASS END=27099905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,767:0,60,255:25,0 chr1 27099906 . G . PASS END=27099906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 27099907 . T . PASS END=27099987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,909:0,62,255:26,0 chr1 27100071 . G . PASS END=27100077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:31,0 chr1 27100078 . C . PASS END=27100078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 27100079 . C . PASS END=27100082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1202:0,93,255:33,0 chr1 27100083 . A . PASS END=27100083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:32,0 chr1 27100084 . A . PASS END=27100098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1266:0,102,255:35,0 chr1 27100099 . A . PASS END=27100099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 27100100 . A . PASS END=27100101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:35:0,95,1335:0,95,255:34,0 chr1 27100102 . A . PASS END=27100102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1270:0,56,255:33,0 chr1 27100103 . T . PASS END=27100116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:97:36:0,97,1284:0,97,255:36,0 chr1 27100117 . C . PASS END=27100117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr1 27100118 . C . PASS END=27100208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1234:0,91,255:38,0 chr1 27100213 . G . PASS END=27100213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 27100293 . A . PASS END=27100386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1148:0,83,255:40,0 chr1 27100387 . C . PASS END=27100389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 27100819 . G . PASS END=27100833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,744:0,66,255:22,0 chr1 27100834 . A . PASS END=27100834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr1 27100835 . A . PASS END=27100844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,833:0,72,255:25,0 chr1 27100845 . C . PASS END=27100896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1111:0,80,255:33,0 chr1 27100897 . C . PASS END=27100897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr1 27100898 . A . PASS END=27100910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1241:0,86,255:30,0 chr1 27100911 . G . PASS END=27100917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,972:0,70,255:25,0 chr1 27100918 . T . PASS END=27100918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:22,2 chr1 27100919 . C . PASS END=27100919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,986:0,21,255:22,2 chr1 27100920 . A . LowGQ END=27100920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:0:30:0,0,908:18,0,255:21,2 chr1 27100921 . G . PASS END=27100921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,1008:0,21,255:22,2 chr1 27100922 . C . PASS END=27100922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:23,0 chr1 27100923 . A . PASS END=27100984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:23,0 chr1 27100985 . C . PASS END=27101005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:19,0 chr1 27101006 . C . PASS END=27101007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 27101008 . G . PASS END=27101023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:16,0 chr1 27101024 . C . PASS END=27101031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 27101032 . T . PASS END=27101089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:16,0 chr1 27101090 . C . PASS END=27101090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 27101091 . A . PASS END=27101102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,493:0,48,255:16,0 chr1 27101103 . A . PASS END=27101103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 27101104 . C . PASS END=27101105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27101106 . G . PASS END=27101106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 27101107 . T . PASS END=27101112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 27101113 . T . PASS END=27101118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 27101119 . C . PASS END=27101151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,566:0,48,255:16,0 chr1 27101152 . A . PASS END=27101158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,454:0,31,255:13,0 chr1 27101159 . A . PASS END=27101162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27101163 . G . PASS END=27101172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,31,255:11,0 chr1 27101173 . A . PASS END=27101175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:13:0,27,405:0,39,255:9,0 chr1 27101176 . G . PASS END=27101176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 27101177 . G . PASS END=27101177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr1 27101178 . C . PASS END=27101183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 27101184 . C . PASS END=27101186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 27101187 . A . PASS END=27101187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 27101188 . G . PASS END=27101193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr1 27101194 . T . PASS END=27101194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27101195 . C . PASS END=27101201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 27101202 . G . PASS END=27101202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 27101203 . C . PASS END=27101206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,653:0,51,255:18,0 chr1 27101207 . A . PASS END=27101207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:17,0 chr1 27101208 . T . PASS END=27101219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:19,0 chr1 27101220 . G . PASS END=27101226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 27101227 . C . PASS END=27101230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27101231 . A . PASS END=27101246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:21,0 chr1 27101247 . A . PASS END=27101247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 27101248 . C . PASS END=27101257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 27101258 . A . PASS END=27101260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27101261 . G . PASS END=27101285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,878:0,66,255:24,0 chr1 27101286 . A . PASS END=27101286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 27101287 . T . PASS END=27101297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 27101298 . A . PASS END=27101298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,720:0,58,255:23,0 chr1 27101299 . C . PASS END=27101312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 27101313 . T . PASS END=27101313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 27101314 . G . PASS END=27101361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,795:0,61,255:25,0 chr1 27101362 . T . PASS END=27101362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 27101363 . G . PASS END=27101364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 27101365 . C . PASS END=27101365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 27101366 . A . PASS END=27101369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 27101370 . G . PASS END=27101370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 27101371 . C . PASS END=27101371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 27101372 . C . PASS END=27101372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27101373 . A . PASS END=27101373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:19,0 chr1 27101374 . G . PASS END=27101374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 27101375 . C . PASS END=27101377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,55,255:19,0 chr1 27101378 . C . PASS END=27101378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,677:0,39,255:17,0 chr1 27101379 . C . PASS END=27101379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 27101380 . A . LowGQ END=27101380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,5:24:0:24:0,0,557:11,0,255:17,0 chr1 27101381 . T . PASS END=27101381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,642:0,38,255:19,0 chr1 27101382 . A . LowGQ END=27101382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,6:24:0:24:0,0,510:28,0,255:16,0 chr1 27101383 . T . PASS END=27101383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 27101384 . G . PASS END=27101384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 27101385 . G . PASS END=27101385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27101386 . T . PASS END=27101386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,632:0,49,255:17,0 chr1 27101387 . C . PASS END=27101388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,578:0,32,255:18,0 chr1 27101389 . C . PASS END=27101389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,648:0,3,255:18,0 chr1 27101390 . T . PASS END=27101390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 27101391 . C . LowGQ END=27101391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,574:12,0,255:16,0 chr1 27101392 . T . PASS END=27101393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,52,255:15,0 chr1 27101394 . C . PASS END=27101394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,654:0,13,255:14,0 chr1 27101395 . C . PASS END=27101395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr1 27101396 . C . PASS END=27101396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:16,0 chr1 27101397 . C . PASS END=27101397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,734:0,22,255:15,0 chr1 27101398 . T . PASS END=27101398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:2:23:0,2,551:0,2,255:15,0 chr1 27101399 . G . PASS END=27101400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,570:0,19,255:15,0 chr1 27101401 . G . PASS END=27101401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:15,0 chr1 27101402 . C . PASS END=27101402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:17,0 chr1 27101403 . C . LowGQ END=27101405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:22:0,0,590:0,0,255:18,0 chr1 27101406 . C . PASS END=27101406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:21:23:0,21,662:0,21,255:17,0 chr1 27101407 . C . PASS END=27101407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:17,0 chr1 27101408 . A . LowGQ END=27101409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,421:39,0,255:16,0 chr1 27101410 . G . PASS END=27101410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:17,0 chr1 27101411 . A . LowGQ END=27101411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,6:22:0:22:0,0,445:56,0,255:15,0 chr1 27101412 . C . PASS END=27101412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:18,0 chr1 27101413 . A . PASS END=27101414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,490:0,10,255:17,0 chr1 27101415 . G . PASS END=27101415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27101416 . G . PASS END=27101416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:15,0 chr1 27101417 . C . LowGQ END=27101419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,482:28,0,255:16,0 chr1 27101420 . C . PASS END=27101420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,512:0,21,255:16,0 chr1 27101421 . C . PASS END=27101421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,643:0,13,255:16,0 chr1 27101422 . T . LowGQ END=27101422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,410:37,0,255:13,0 chr1 27101423 . C . PASS END=27101423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,637:0,16,255:15,0 chr1 27101424 . C . LowGQ END=27101426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,459:0,0,255:15,0 chr1 27101427 . C . PASS END=27101427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,46,255:15,0 chr1 27101428 . T . LowGQ END=27101430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:20:0,0,443:0,0,255:17,0 chr1 27101431 . C . PASS END=27101431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 27101432 . T . LowGQ END=27101433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,497:1,0,255:17,0 chr1 27101434 . C . PASS END=27101434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr1 27101435 . C . PASS END=27101435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:17,0 chr1 27101436 . A . PASS END=27101436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,537:0,12,255:18,0 chr1 27101437 . G . PASS END=27101438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,591:0,21,255:18,0 chr1 27101439 . C . PASS END=27101439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:18,0 chr1 27101440 . C . PASS END=27101440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 27101441 . C . PASS END=27101441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 27101442 . C . PASS END=27101442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,666:0,21,255:17,0 chr1 27101443 . A . LowGQ END=27101443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,443:21,0,255:15,0 chr1 27101444 . C . PASS END=27101445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:17,0 chr1 27101446 . A . PASS END=27101446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,568:0,27,255:17,0 chr1 27101447 . A . LowGQ END=27101447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,466:12,0,255:16,0 chr1 27101448 . G . PASS END=27101448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,558:0,13,255:17,0 chr1 27101449 . C . PASS END=27101449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27101450 . A . LowGQ END=27101451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:20:0,0,565:0,0,255:18,0 chr1 27101452 . G . PASS END=27101453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27101454 . A . PASS END=27101454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,619:0,5,255:18,0 chr1 27101455 . G . PASS END=27101455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:18,0 chr1 27101456 . A . PASS END=27101456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,498:0,10,255:17,0 chr1 27101457 . A . PASS END=27101457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,605:0,21,255:18,0 chr1 27101458 . T . LowGQ END=27101458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,520:12,0,255:17,0 chr1 27101459 . C . PASS END=27101459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:17,0 chr1 27101460 . A . LowGQ END=27101460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,545:18,0,255:18,0 chr1 27101461 . C . PASS END=27101461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27101462 . A . PASS END=27101463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:20:0,13,558:0,13,255:17,0 chr1 27101464 . T . PASS END=27101468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:17,0 chr1 27101469 . A . PASS END=27101469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,541:0,10,255:15,0 chr1 27101470 . G . PASS END=27101471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:17,0 chr1 27101472 . T . PASS END=27101472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,627:0,27,255:16,0 chr1 27101473 . A . PASS END=27101477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,676:0,43,255:18,0 chr1 27101478 . G . PASS END=27101479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,573:0,24,255:18,0 chr1 27101480 . C . PASS END=27101489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:18,0 chr1 27101490 . T . PASS END=27101490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,520:0,21,255:16,0 chr1 27101491 . G . PASS END=27101500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:19,0 chr1 27101501 . A . PASS END=27101504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 27101505 . A . PASS END=27101506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 27101507 . A . PASS END=27101507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27101508 . A . PASS END=27101508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 27101509 . C . PASS END=27101510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 27101511 . G . PASS END=27101511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,751:0,14,255:20,0 chr1 27101512 . C . PASS END=27101514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 27101515 . C . PASS END=27101515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27101516 . T . PASS END=27101516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:8:24:0,8,676:0,8,255:19,0 chr1 27101517 . C . PASS END=27101517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 27101518 . T . PASS END=27101518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:20,0 chr1 27101519 . C . PASS END=27101519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 27101520 . C . PASS END=27101521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:22,0 chr1 27101522 . A . PASS END=27101522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27101523 . G . PASS END=27101523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 27101524 . C . PASS END=27101527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 27101528 . T . PASS END=27101530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 27101531 . C . PASS END=27101532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27101533 . A . PASS END=27101533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 27101534 . T . PASS END=27101534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,814:0,28,255:22,0 chr1 27101535 . T . PASS END=27101535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:21,0 chr1 27101536 . C . PASS END=27101537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 27101538 . T . PASS END=27101538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:22,0 chr1 27101539 . G . PASS END=27101540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:22,0 chr1 27101541 . A . PASS END=27101541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:22,0 chr1 27101542 . C . PASS END=27101542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 27101543 . T . PASS END=27101543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 27101544 . C . PASS END=27101555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:24,0 chr1 27101556 . T . PASS END=27101556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 27101557 . G . PASS END=27101563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 27101564 . G . PASS END=27101564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 27101565 . C . PASS END=27101568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 27101569 . T . PASS END=27101569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 27101570 . C . PASS END=27101580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:25,0 chr1 27101581 . T . PASS END=27101581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 27101582 . G . PASS END=27101603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 27101604 . C . PASS END=27101604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27101605 . T . PASS END=27101605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 27101606 . G . PASS END=27101614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 27101615 . C . PASS END=27101615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 27101616 . C . PASS END=27101617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 27101618 . A . PASS END=27101618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 27101619 . T . PASS END=27101675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1157:0,80,255:34,0 chr1 27101676 . T . PASS END=27101686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 27101687 . A . PASS END=27101689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27101690 . C . PASS END=27101690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,933:0,53,255:25,0 chr1 27101691 . G . PASS END=27101697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 27101698 . A . PASS END=27101698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:23,0 chr1 27101699 . A . PASS END=27101708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 27101709 . T . PASS END=27101710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 27101711 . G . PASS END=27101711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 27102068 . G . PASS END=27102098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1055:0,84,255:37,0 chr1 27102099 . C . PASS END=27102099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 27102100 . C . PASS END=27102194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1125:0,80,255:40,0 chr1 27102195 . T . PASS END=27102198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1094:0,77,255:28,0 chr1 27102308 . A . PASS END=27102308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:21,0 chr1 27102309 . T . PASS END=27102309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 27102310 . A . PASS END=27102311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,679:0,52,255:22,0 chr1 27102312 . C . PASS END=27102313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 27102314 . T . PASS END=27102314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 27102315 . C . PASS END=27102358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,864:0,72,255:25,0 chr1 27102359 . G . PASS END=27102360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 27102361 . T . PASS END=27102369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 27102370 . C . PASS END=27102370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 27102371 . A . PASS END=27102372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27102373 . T . PASS END=27102373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,709:0,35,255:20,0 chr1 27102374 . A . PASS END=27102374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 27102375 . A . PASS END=27102378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27102379 . T . PASS END=27102379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:20,0 chr1 27102380 . T . PASS END=27102381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27102382 . G . PASS END=27102382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:19,0 chr1 27102383 . T . PASS END=27102383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,571:0,46,255:19,0 chr1 27102384 . T . PASS END=27102384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27102385 . T . PASS END=27102391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 27105514 . C . PASS END=27105518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27105519 . A . LowGQ END=27105519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,602:0,0,255:17,0 chr1 27105520 . G . PASS END=27105525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:24,0 chr1 27105526 . C . PASS END=27105526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:24,0 chr1 27105527 . T . PASS END=27105534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:25,0 chr1 27105535 . C . PASS END=27105535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 27105536 . T . PASS END=27105545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr1 27105546 . T . PASS END=27105546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 27105547 . T . PASS END=27105550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 27105551 . G . PASS END=27105551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 27105552 . A . PASS END=27105555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 27105556 . T . PASS END=27105561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 27105562 . A . PASS END=27105567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27105568 . A . PASS END=27105569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,935:0,70,255:27,0 chr1 27105570 . C . PASS END=27105581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:28,0 chr1 27105582 . A . PASS END=27105586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 27105587 . A . PASS END=27105589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 27105590 . A . PASS END=27105601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:65:27:0,65,969:0,65,255:25,0 chr1 27105602 . A . PASS END=27105604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 27105605 . C . PASS END=27105615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:70:29:0,70,883:0,70,255:26,0 chr1 27105616 . A . PASS END=27105616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27105617 . C . PASS END=27105618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 27105619 . C . PASS END=27105674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1202:0,84,255:38,0 chr1 27105675 . G . PASS END=27105679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1221:0,72,255:36,1 chr1 27105680 . A . PASS END=27105731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1160:0,81,255:37,0 chr1 27105732 . A . PASS END=27105732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:33,0 chr1 27105733 . G . PASS END=27105966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1192:0,88,255:40,1 chr1 27105967 . G . PASS END=27105973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr1 27105974 . A . PASS END=27105976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 27105977 . C . PASS END=27106031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 27106032 . T . PASS END=27106044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 27106045 . G . PASS END=27106048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,90,255:26,0 chr1 27106049 . G . PASS END=27106056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:29,0 chr1 27106057 . G . PASS END=27106074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,898:0,62,255:26,0 chr1 27106075 . G . PASS END=27106075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 27106076 . G . PASS END=27106076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27106077 . G . PASS END=27106080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 27106081 . C . PASS END=27106098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,900:0,72,255:26,0 chr1 27106099 . G . PASS END=27106099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 27106100 . A . PASS END=27106101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 27106102 . A . PASS END=27106102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 27106103 . A . PASS END=27106108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:24,0 chr1 27106109 . T . PASS END=27106109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 27106110 . C . PASS END=27106117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:26,0 chr1 27106118 . C . PASS END=27106126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1186:0,84,255:31,0 chr1 27106127 . A . PASS END=27106127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 27106128 . C . PASS END=27106612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,974:0,80,255:40,0 chr1 27106613 . C . PASS END=27106624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:26:0,78,955:0,78,255:26,0 chr1 27106625 . G . PASS END=27106639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr1 27106640 . T . PASS END=27106648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 27106649 . G . PASS END=27106650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 27106651 . C . PASS END=27106668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:24:0,66,990:0,72,255:25,0 chr1 27106669 . T . PASS END=27106669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 27106670 . G . PASS END=27106682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 27106683 . A . PASS END=27106684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 27106685 . C . PASS END=27106686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27106687 . C . PASS END=27106694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr1 27106695 . C . PASS END=27106698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 27106699 . T . PASS END=27106700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 27106701 . C . PASS END=27106702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 27106703 . C . PASS END=27106703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 27106704 . C . PASS END=27106704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 27106705 . C . PASS END=27106709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27106710 . C . PASS END=27106710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27106711 . C . PASS END=27106711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:18,0 chr1 27106712 . C . PASS END=27106714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27106715 . A . PASS END=27106715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 27106716 . T . PASS END=27106716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 27106717 . G . PASS END=27106720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 27106721 . T . PASS END=27106721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 27106722 . C . PASS END=27106758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,891:0,62,255:26,0 chr1 27106759 . A . PASS END=27106759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 27106760 . A . PASS END=27106779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 27106780 . A . PASS END=27106780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 27106781 . A . PASS END=27106789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:25,0 chr1 27106790 . T . PASS END=27106790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 27106791 . G . PASS END=27106801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:25,0 chr1 27106802 . C . PASS END=27106809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:28,0 chr1 27106810 . T . PASS END=27106810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,927:0,48,255:27,0 chr1 27106811 . T . PASS END=27106823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 27106824 . G . PASS END=27106827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:29,0 chr1 27106828 . T . PASS END=27106831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27106832 . A . PASS END=27106847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:28:0,71,1061:0,71,255:28,0 chr1 27106848 . C . PASS END=27106853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27106854 . C . PASS END=27106911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,806:0,62,255:26,0 chr1 27106912 . G . PASS END=27106914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 27106915 . C . PASS END=27106945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:21,0 chr1 27106946 . C . PASS END=27106947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27106948 . G . PASS END=27106950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27106951 . C . PASS END=27106951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27106952 . A . PASS END=27106979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,800:0,66,255:26,0 chr1 27106980 . C . PASS END=27106981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27106982 . T . PASS END=27106982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 27106983 . C . PASS END=27107006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1180:0,93,255:33,0 chr1 27107007 . A . PASS END=27107009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr1 27107010 . G . PASS END=27107028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,995:0,84,255:30,0 chr1 27107029 . A . PASS END=27107029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 27107030 . G . PASS END=27107034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr1 27107035 . C . PASS END=27107035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 27107036 . T . PASS END=27107040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27107041 . A . PASS END=27107041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 27107042 . T . PASS END=27107043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 27107044 . C . PASS END=27107044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 27107045 . A . PASS END=27107055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:29:0,82,1041:0,82,255:32,0 chr1 27107056 . T . PASS END=27107056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:31,0 chr1 27107057 . T . PASS END=27107239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:86:34:0,86,1159:0,86,255:40,0 chr1 27107240 . A . PASS END=27107240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1492:0,66,255:38,0 chr1 27107241 . G . PASS END=27107247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:44:0,80,1484:0,80,255:39,0 chr1 27114494 . C . PASS END=27114494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 27114633 . G . PASS END=27114633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 27114651 . G . PASS END=27114651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 27114749 . G . PASS END=27114749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 27117244 . G . PASS END=27117244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 27117299 . G . PASS END=27117299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 27117307 . A . PASS END=27117384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:93:43:0,93,1250:0,93,255:40,0 chr1 27117388 . A . PASS END=27117388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr1 27120604 . G . PASS END=27120604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 27120605 . C . PASS END=27120609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:21,0 chr1 27120610 . T . PASS END=27120610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 27120611 . T . PASS END=27120619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 27120620 . T . PASS END=27120620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 27120621 . C . PASS END=27120627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:22:0,62,800:0,62,255:26,0 chr1 27120628 . G . PASS END=27120628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 27120629 . A . PASS END=27120629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 27120630 . T . PASS END=27120634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 27120635 . A . PASS END=27120635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 27120636 . T . PASS END=27120850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1062:0,80,255:40,0 chr1 27120851 . T . PASS END=27120853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 27120854 . G . PASS END=27120883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1102:0,87,255:29,0 chr1 27120884 . C . PASS END=27120884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 27120885 . A . PASS END=27120896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 27120897 . C . PASS END=27120932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:27,0 chr1 27120933 . C . PASS END=27120934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 27120935 . T . PASS END=27120935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 27120936 . G . PASS END=27120943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 27120944 . T . PASS END=27120949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 27120950 . T . PASS END=27120952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27120953 . A . PASS END=27120953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:21,0 chr1 27120954 . C . PASS END=27120954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 27120955 . T . PASS END=27120955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:20,0 chr1 27120956 . G . PASS END=27121009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1164:0,85,255:35,0 chr1 27121010 . T . PASS END=27121010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1161:0,47,255:30,0 chr1 27121011 . C . PASS END=27121022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1160:0,85,255:35,0 chr1 27121023 . T . PASS END=27121023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:34,0 chr1 27121024 . G . PASS END=27121054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1202:0,94,255:37,0 chr1 27121055 . C . PASS END=27121055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:35,0 chr1 27121056 . A . PASS END=27121061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,105,1575:0,108,255:36,0 chr1 27121062 . T . PASS END=27121062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:32,0 chr1 27121063 . G . PASS END=27121094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,92,255:36,0 chr1 27121095 . G . PASS END=27121097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 27121098 . T . PASS END=27121725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:33:0,81,1089:0,82,255:40,0 chr1 27124054 . G . PASS END=27124055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27124056 . T . PASS END=27124056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:26,0 chr1 27124057 . C . PASS END=27124057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27124058 . T . PASS END=27124058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 27124059 . C . PASS END=27124385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1025:0,84,255:40,0 chr1 27124445 . T . PASS END=27124445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 27124449 . C . PASS END=27124449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 27124521 . G . PASS END=27124521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1657:0,119,255:40,0 chr1 27124702 . A . PASS END=27124702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 27124720 . A . PASS END=27124720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 27124776 . C . PASS END=27124776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr1 27124788 . A . PASS END=27124788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 27124791 . C . PASS END=27124791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr1 27124808 . T . PASS END=27124808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:74:62:0,74,2062:0,74,255:40,1 chr1 27124852 . T . PASS END=27124852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 27153296 . A . PASS END=27153303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 27153304 . C . LowGQ END=27153451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 27153452 . A . LowDepth;LowGQ END=27153495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,16:3,0 chr1 27153496 . G . PASS END=27153500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 27153501 . A . PASS END=27153510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 27153511 . G . PASS END=27153518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:11,0 chr1 27153519 . G . PASS END=27153528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr1 27153529 . C . PASS END=27153615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,513:0,45,255:18,0 chr1 27153616 . C . PASS END=27153616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 27153617 . T . PASS END=27153617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27153618 . T . PASS END=27153618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 27153619 . C . PASS END=27153627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,495:0,42,255:14,0 chr1 27153628 . T . PASS END=27153630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27158938 . C . PASS END=27158954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,102,1288:0,102,255:39,0 chr1 27158955 . G . PASS END=27158955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 27158956 . C . PASS END=27159074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:87:31:0,87,1305:0,93,255:40,0 chr1 27159075 . C . PASS END=27159075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 27159076 . A . PASS END=27159076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27159077 . G . PASS END=27159088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,74,255:26,0 chr1 27159089 . A . PASS END=27159089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,887:0,45,255:24,0 chr1 27159090 . A . PASS END=27159094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:25,0 chr1 27159095 . A . PASS END=27159095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 27159096 . T . PASS END=27159096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 27159097 . C . PASS END=27159097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr1 27159098 . G . PASS END=27159098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 27175099 . A . PASS END=27175108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr1 27175109 . C . PASS END=27175112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:42:27:0,42,953:0,42,255:30,0 chr1 27175113 . T . PASS END=27175193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1164:0,81,255:38,0 chr1 27175194 . A . PASS END=27175194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1335:0,70,255:37,0 chr1 27175195 . A . PASS END=27175206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:39:0,96,1396:0,101,255:39,0 chr1 27175207 . C . PASS END=27175207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:31,0 chr1 27175208 . A . PASS END=27175220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,83,255:33,0 chr1 27175221 . C . PASS END=27175247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,850:0,67,255:26,0 chr1 27175248 . G . PASS END=27175248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 27176792 . A . PASS END=27176795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 27176796 . A . PASS END=27176796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr1 27176797 . T . PASS END=27176807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 27176808 . C . PASS END=27176809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,621:0,21,255:19,0 chr1 27176810 . G . PASS END=27176811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 27176812 . C . PASS END=27176815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 27176816 . G . PASS END=27176816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 27176817 . G . PASS END=27176817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27176818 . G . PASS END=27176819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:18,0 chr1 27176820 . G . LowGQ END=27176820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,659:6,0,255:18,0 chr1 27176821 . G . PASS END=27176821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:18,0 chr1 27176822 . G . PASS END=27176822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27176823 . C . PASS END=27176823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:19,0 chr1 27176824 . A . PASS END=27176825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,644:0,11,255:18,0 chr1 27176826 . C . PASS END=27176826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 27176827 . T . PASS END=27176827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:21,0 chr1 27176828 . G . PASS END=27176830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27176831 . T . PASS END=27176831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27176832 . G . PASS END=27176837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27176838 . A . PASS END=27176838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,872:0,50,255:25,0 chr1 27176839 . C . PASS END=27176844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 27176845 . T . PASS END=27176845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,910:0,50,255:25,0 chr1 27176846 . A . PASS END=27176871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:24:0,61,856:0,61,255:26,0 chr1 27176872 . T . PASS END=27176872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 27176873 . C . PASS END=27176873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 27176874 . C . PASS END=27176874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:22,0 chr1 27176875 . C . PASS END=27176906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,917:0,72,255:26,0 chr1 27176907 . T . PASS END=27176907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 27176908 . G . PASS END=27176917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 27176918 . A . PASS END=27176918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 27176919 . C . PASS END=27176929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 27177049 . G . PASS END=27177072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 27177073 . C . PASS END=27177073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 27177074 . C . PASS END=27177080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27177081 . A . PASS END=27177081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 27177082 . A . PASS END=27177092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,865:0,81,255:27,0 chr1 27177093 . G . PASS END=27177097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 27177620 . C . PASS END=27177620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27177621 . G . PASS END=27177629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27177630 . T . PASS END=27177630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,883:0,73,255:28,0 chr1 27177631 . T . PASS END=27177642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1080:0,90,255:32,0 chr1 27177643 . T . PASS END=27177643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1026:0,79,255:31,0 chr1 27177644 . C . PASS END=27177651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1089:0,80,255:32,0 chr1 27177652 . T . PASS END=27177652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 27177653 . C . PASS END=27177664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:33,0 chr1 27177665 . G . PASS END=27177665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:30,0 chr1 27177666 . G . PASS END=27177719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1119:0,80,255:34,0 chr1 27177720 . G . PASS END=27177720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27177721 . A . PASS END=27177722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27179244 . A . PASS END=27179289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:34:0,95,1274:0,95,255:40,0 chr1 27179290 . A . PASS END=27179290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1283:0,79,255:37,0 chr1 27179291 . C . PASS END=27179356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1260:0,93,255:40,0 chr1 27180217 . C . PASS END=27180232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 27180233 . G . PASS END=27180235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr1 27180236 . T . PASS END=27180236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:30,0 chr1 27180237 . T . PASS END=27180334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1210:0,91,255:40,0 chr1 27182676 . G . PASS END=27182676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 27182677 . A . PASS END=27182677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1024:0,60,255:29,0 chr1 27182678 . G . PASS END=27182717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:33,0 chr1 27189704 . A . PASS END=27189713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,448:0,45,255:16,0 chr1 27189714 . C . PASS END=27189714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 27189715 . C . PASS END=27189730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 27189731 . G . PASS END=27189731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 27189732 . C . PASS END=27189733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 27189734 . A . PASS END=27189734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 27189735 . A . PASS END=27189748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:18,0 chr1 27189749 . G . PASS END=27189749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27189750 . C . PASS END=27189767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 27189768 . T . PASS END=27189784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 27189785 . G . PASS END=27189787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 27189788 . G . PASS END=27189788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,601:0,21,255:17,0 chr1 27189789 . C . PASS END=27189798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,615:0,43,255:19,0 chr1 27189799 . G . PASS END=27189811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 27189812 . T . PASS END=27189812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 27189813 . C . PASS END=27189830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,817:0,72,255:24,0 chr1 27189831 . T . PASS END=27189831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 27189832 . G . PASS END=27189839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 27189840 . T . PASS END=27189841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 27189842 . G . PASS END=27189844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:22,0 chr1 27189845 . T . PASS END=27189845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 27189846 . A . PASS END=27189847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 27189848 . A . PASS END=27189848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 27189849 . A . PASS END=27189868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,906:0,72,255:25,0 chr1 27189869 . A . PASS END=27189869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 27189870 . G . PASS END=27189879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 27189880 . G . PASS END=27189880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27189881 . A . PASS END=27189881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 27189882 . G . PASS END=27189882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr1 27189883 . G . PASS END=27189886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1164:0,83,255:33,0 chr1 27189887 . C . PASS END=27189887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:29,0 chr1 27189888 . T . PASS END=27189904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1280:0,84,255:36,0 chr1 27189905 . A . PASS END=27189905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:34,0 chr1 27189906 . A . PASS END=27189911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1295:0,92,255:36,0 chr1 27189912 . A . PASS END=27189912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:34,0 chr1 27189913 . C . PASS END=27189931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1266:0,91,255:38,0 chr1 27189932 . A . PASS END=27189932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1237:0,78,255:36,0 chr1 27189933 . A . PASS END=27189959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1219:0,91,255:38,0 chr1 27189960 . A . PASS END=27189960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr1 27189961 . G . PASS END=27189967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1256:0,92,255:33,0 chr1 27189968 . G . PASS END=27189968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:32,0 chr1 27189969 . A . PASS END=27189994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:33,0 chr1 27189995 . A . PASS END=27190009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:27:0,68,1125:0,68,255:26,0 chr1 27190010 . C . PASS END=27190013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 27190014 . A . PASS END=27190092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,762:0,64,255:26,0 chr1 27190093 . C . PASS END=27190101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 27190102 . G . PASS END=27190102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr1 27190103 . G . PASS END=27190105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27190106 . G . PASS END=27190108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 27190109 . A . PASS END=27190109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:23,0 chr1 27190110 . C . PASS END=27190125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,887:0,67,255:26,0 chr1 27190126 . G . PASS END=27190160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1141:0,80,255:31,0 chr1 27190161 . A . PASS END=27190161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 27190162 . G . PASS END=27190166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1155:0,90,255:33,0 chr1 27190167 . T . PASS END=27190167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1125:0,68,255:32,0 chr1 27190168 . G . PASS END=27190178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1181:0,89,255:36,0 chr1 27190179 . A . PASS END=27190179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 27190180 . G . PASS END=27190180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1305:0,108,255:36,0 chr1 27190181 . A . PASS END=27190181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:34,0 chr1 27190182 . A . PASS END=27190186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1283:0,92,255:36,0 chr1 27190187 . A . PASS END=27190187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:35,0 chr1 27190188 . T . PASS END=27190195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:35,0 chr1 27190196 . A . PASS END=27190196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1324:0,59,255:31,0 chr1 27190197 . C . PASS END=27190199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:34,0 chr1 27190200 . A . PASS END=27190200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:33,0 chr1 27190201 . C . PASS END=27190208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:34,0 chr1 27190209 . G . PASS END=27190209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:31,0 chr1 27190210 . C . PASS END=27190240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:32,0 chr1 27190241 . C . PASS END=27190241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 27190242 . A . PASS END=27190274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1127:0,84,255:32,0 chr1 27190275 . T . PASS END=27190281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,1000:0,70,255:26,0 chr1 27190282 . G . PASS END=27190282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27190283 . G . PASS END=27190285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27190286 . A . PASS END=27190286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 27190287 . A . PASS END=27190288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27190289 . A . PASS END=27190289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:24,0 chr1 27190290 . C . PASS END=27190303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 27190304 . G . PASS END=27190309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27190310 . G . PASS END=27190312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,986:0,67,255:26,0 chr1 27190313 . G . PASS END=27190327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:33,0 chr1 27190328 . A . PASS END=27190328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:31,0 chr1 27190329 . G . PASS END=27190382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1105:0,83,255:33,0 chr1 27190383 . T . PASS END=27190436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:24:0,64,884:0,64,255:26,0 chr1 27190437 . A . PASS END=27190437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 27190438 . G . PASS END=27190441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 27190442 . C . PASS END=27190450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 27206168 . C . PASS END=27206199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,850:0,75,255:26,0 chr1 27206200 . G . PASS END=27206204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 27206205 . G . PASS END=27206240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,892:0,66,255:26,0 chr1 27210651 . G . PASS END=27210683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,146,255:40,0 chr1 27210684 . G . PASS END=27210720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,145,255:40,0 chr1 27210721 . T C, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.542;ReadPosRankSum=3.367;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,33,0:0.559,0.000:59:14,13,0:12,20,0:48:85,0,49,1164,871,2035:255,0,255:24,0:5.0000e+01,7.3258e-05,5.1615e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,13,20:13,13,23,10 chr1 27210722 . G . PASS END=27210758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,102,1530:0,118,255:40,0 chr1 27210759 . A . PASS END=27210771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:36:0,82,1395:0,82,255:34,0 chr1 27210772 . T . PASS END=27210781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,83,255:25,0 chr1 27212464 . C . PASS END=27212598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1025:0,84,255:40,0 chr1 27212599 . C . PASS END=27212607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr1 27212608 . G . PASS END=27212610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,855:0,58,255:19,0 chr1 27212611 . G . PASS END=27212612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 27212613 . C . PASS END=27212624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,52,255:19,0 chr1 27215460 . C . PASS END=27215616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,114,1560:0,116,255:40,0 chr1 27216177 . C . PASS END=27216178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 27216179 . T . PASS END=27216179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 27216180 . G . PASS END=27216195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 27216196 . A . PASS END=27216196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 27216197 . T . PASS END=27216198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,518:0,12,255:16,0 chr1 27216199 . T . PASS END=27216199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 27216200 . G . PASS END=27216202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 27216203 . A . PASS END=27216203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 27216204 . G . PASS END=27216204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 27216205 . A . PASS END=27216206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 27216207 . G . PASS END=27216207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 27216208 . A . PASS END=27216208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr1 27216209 . T . PASS END=27216247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,645:0,41,255:19,0 chr1 27216248 . G . PASS END=27216299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,831:0,61,255:25,0 chr1 27216300 . A . PASS END=27216300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 27216301 . C . PASS END=27216304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 27216305 . G . PASS END=27216305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 27216306 . C . PASS END=27216306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 27216307 . C . PASS END=27216307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 27216308 . A . PASS END=27216316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 27216317 . T . PASS END=27216317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,906:0,47,255:21,0 chr1 27216318 . G . PASS END=27216336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr1 27216337 . C . PASS END=27216345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 27216346 . A . PASS END=27216346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 27216347 . G . PASS END=27216363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 27216364 . A . PASS END=27216365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 27216366 . G . PASS END=27216368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27216369 . C . PASS END=27216369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 27216370 . A . PASS END=27216373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 27216374 . C . PASS END=27216374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 27216375 . G . PASS END=27216384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 27216385 . T . PASS END=27216392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 27216393 . C . PASS END=27216396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 27216397 . A . PASS END=27216407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:26,0 chr1 27216408 . C . PASS END=27216408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1007:0,81,255:27,0 chr1 27216409 . A . PASS END=27216411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1061:0,71,255:26,0 chr1 27216412 . T . PASS END=27216414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 27216415 . A . PASS END=27216415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27216416 . C . PASS END=27216420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 27216421 . C . PASS END=27216422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27216423 . C . PASS END=27216436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:31,0 chr1 27216437 . C . PASS END=27216437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 27216438 . C . PASS END=27216438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:29,0 chr1 27216439 . T . PASS END=27216439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1090:0,63,255:28,0 chr1 27216440 . C . PASS END=27216440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:29,0 chr1 27216441 . G . PASS END=27216442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1056:0,65,255:29,0 chr1 27216443 . T . PASS END=27216444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1101:0,80,255:29,0 chr1 27216445 . G . PASS END=27216446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:62:31:0,62,1080:0,62,255:29,0 chr1 27216447 . C . PASS END=27216447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27216448 . G . PASS END=27216448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 27216449 . G . PASS END=27216449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:32,0 chr1 27216450 . G . PASS END=27216450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:32,0 chr1 27216451 . T . PASS END=27216456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1202:0,86,255:34,0 chr1 27216457 . T . PASS END=27216457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 27216458 . T . PASS END=27216464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1281:0,81,255:35,0 chr1 27216465 . C . PASS END=27216465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:33,0 chr1 27216466 . G . PASS END=27216466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1278:0,56,255:33,0 chr1 27216467 . C . PASS END=27216470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:33,0 chr1 27216471 . G . PASS END=27216474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:32,0 chr1 27216475 . C . PASS END=27216475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 27216476 . G . PASS END=27216476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:32,0 chr1 27216477 . G . PASS END=27216477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:32,0 chr1 27216478 . C . PASS END=27216480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:32,0 chr1 27216481 . A . PASS END=27216481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 27216482 . G . PASS END=27216483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:32,0 chr1 27216484 . G . PASS END=27216486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1205:0,86,255:32,0 chr1 27216487 . C . PASS END=27216487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 27216488 . G . PASS END=27216520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:31:0,81,1215:0,88,255:35,0 chr1 27216521 . T . PASS END=27216568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,815:0,62,255:26,0 chr1 27216569 . T . PASS END=27216585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:18,0 chr1 27216586 . A . PASS END=27216586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 27216587 . T . PASS END=27216587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:12,0 chr1 27217295 . C . PASS END=27217295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 27217296 . T . PASS END=27217319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:18,0 chr1 27217320 . A . PASS END=27217320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 27217321 . G . PASS END=27217330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 27217331 . T . PASS END=27217331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 27217332 . G . PASS END=27217342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,668:0,54,255:18,0 chr1 27217501 . T . PASS END=27217507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 27217508 . G . PASS END=27217652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:28:0,84,1041:0,84,255:40,0 chr1 27217653 . G . PASS END=27217653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 27217654 . C . PASS END=27217661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 27217662 . C . PASS END=27217662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 27217663 . A . PASS END=27217670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27217671 . G . PASS END=27217691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,754:0,63,255:25,0 chr1 27217692 . A . PASS END=27217717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,706:0,46,255:19,0 chr1 27218902 . C . PASS END=27218905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:24,0 chr1 27218906 . A . PASS END=27218906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,768:0,42,255:23,0 chr1 27218907 . T . PASS END=27218911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 27218912 . G . PASS END=27218912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 27218913 . C . PASS END=27218914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 27218915 . T . PASS END=27218915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,867:0,31,255:24,0 chr1 27218916 . G . PASS END=27218917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,984:0,65,255:26,0 chr1 27218918 . A . PASS END=27218927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:30,0 chr1 27218928 . T . PASS END=27218928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr1 27218929 . T . PASS END=27218985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:31:0,85,1319:0,85,255:40,0 chr1 27218986 . C . PASS END=27218986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 27218987 . C . PASS END=27219029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:36:0,90,1350:0,98,255:39,0 chr1 27219161 . C . PASS END=27219282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:90:38:0,90,1471:0,90,255:40,0 chr1 27219880 . C . PASS END=27219939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,108,1620:0,111,255:40,0 chr1 27220727 . C . PASS END=27220806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1145:0,80,255:37,0 chr1 27220807 . T . PASS END=27220807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 27220808 . C . PASS END=27220859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1139:0,80,255:31,0 chr1 27220860 . C . PASS END=27220873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:24,0 chr1 27220874 . G . PASS END=27220874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 27220875 . T . PASS END=27220883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 27220884 . C . PASS END=27220901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 27223792 . C . PASS END=27223805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,131,255:40,0 chr1 27223806 . A . PASS END=27223806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:69:51:0,69,1311:0,69,255:40,0 chr1 27223807 . C . PASS END=27224172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:34:0,81,1215:0,81,255:40,0 chr1 27224173 . A . PASS END=27224180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:30:0,78,1170:0,90,255:26,0 chr1 27224181 . G . PASS END=27224181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27224182 . T . PASS END=27224216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:25,0 chr1 27226483 . C . PASS END=27226487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 27226488 . G . PASS END=27226489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:15,0 chr1 27226490 . C . PASS END=27226500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:19,0 chr1 27226501 . G . PASS END=27226501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 27226502 . C . PASS END=27226502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 27226503 . C . PASS END=27226505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 27226506 . A . PASS END=27226506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 27226507 . G . PASS END=27226523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr1 27226524 . C . PASS END=27226524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:19,0 chr1 27226525 . G . PASS END=27226539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:22,0 chr1 27226540 . T . PASS END=27226540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 27226541 . C . PASS END=27226548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,914:0,69,255:24,0 chr1 27226549 . A . PASS END=27226549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 27226550 . A . PASS END=27226550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 27226551 . T . PASS END=27226551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 27226552 . C . PASS END=27226574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr1 27226575 . A . PASS END=27226576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr1 27226577 . G . PASS END=27226578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 27226579 . G . PASS END=27226588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 27226589 . C . PASS END=27226592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 27226593 . G . PASS END=27226593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 27226594 . C . PASS END=27226595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 27226596 . T . PASS END=27226596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 27226597 . G . PASS END=27226608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:20,0 chr1 27226609 . T . PASS END=27226609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 27226610 . T . PASS END=27226610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,646:0,60,255:20,0 chr1 27226611 . A . PASS END=27226611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 27226612 . C . PASS END=27226613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 27226614 . G . PASS END=27226642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 27226643 . G . PASS END=27226644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27226645 . T . PASS END=27226649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr1 27226650 . G . PASS END=27226655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27226656 . T . PASS END=27226742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:16:0,43,568:0,43,255:19,0 chr1 27226743 . G . PASS END=27226743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 27226744 . A . PASS END=27226744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:20,0 chr1 27226745 . G . PASS END=27226752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,921:0,62,255:23,0 chr1 27226753 . C . PASS END=27226753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 27226754 . G . PASS END=27226762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 27226763 . A . PASS END=27226763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:3:27:0,3,822:0,3,255:24,0 chr1 27226764 . G . PASS END=27226777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 27226778 . C . PASS END=27226780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27226781 . A . PASS END=27226781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 27226782 . T . PASS END=27226783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27226784 . C . PASS END=27226784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 27226785 . C . PASS END=27226788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27226789 . A . PASS END=27226789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 27226790 . G . PASS END=27226790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27226791 . T . PASS END=27226793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27226794 . A . PASS END=27226795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27226796 . A . PASS END=27226796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27226797 . C . PASS END=27226804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 27226805 . G . PASS END=27226805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,1 chr1 27226806 . C . PASS END=27226806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr1 27226807 . C . PASS END=27226812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 27226813 . C . PASS END=27226813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 27226814 . G . PASS END=27226885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1033:0,87,255:40,0 chr1 27226886 . T . PASS END=27226924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr1 27226925 . C . PASS END=27226926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 27226927 . C . PASS END=27226933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27237634 . A . PASS END=27237726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,105,1575:0,121,255:40,0 chr1 27238336 . T . PASS END=27238338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27238339 . C . PASS END=27238344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 27238345 . C . PASS END=27238345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 27238346 . A . PASS END=27238351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 27238352 . A . PASS END=27238353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 27238354 . G . PASS END=27238365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:26,0 chr1 27238366 . G . PASS END=27238380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:28:0,81,1111:0,82,255:33,0 chr1 27238381 . A . PASS END=27238381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:32,0 chr1 27238382 . T . PASS END=27238419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1127:0,82,255:38,0 chr1 27238420 . G . PASS END=27238420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:38,0 chr1 27238421 . C . PASS END=27238507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1260:0,92,255:40,0 chr1 27238508 . T . PASS END=27238537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,68,255:26,0 chr1 27238538 . A . PASS END=27238538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 27238539 . G . PASS END=27238577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:23,0 chr1 27238804 . T . PASS END=27238895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:39:0,105,1421:0,105,255:40,0 chr1 27239900 . C . PASS END=27239900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 27239901 . G . PASS END=27239901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 27239902 . G . PASS END=27239930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:12,0 chr1 27239931 . G . PASS END=27239936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 27239937 . T . PASS END=27239937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 27239938 . T . PASS END=27239950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 27239951 . G . PASS END=27239951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 27239952 . C . PASS END=27239966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 27239967 . G . PASS END=27239967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 27239968 . G . PASS END=27239972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27239973 . C . PASS END=27239973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 27239974 . A . PASS END=27239976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27239977 . C . PASS END=27239977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 27239978 . A . PASS END=27239978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27239979 . G . PASS END=27239980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 27239981 . A . PASS END=27239992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 27239993 . G . PASS END=27239993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 27239994 . C . PASS END=27240000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:12,0 chr1 27240001 . G . PASS END=27240001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 27240002 . C . PASS END=27240005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27240006 . G . PASS END=27240006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 27240007 . G . PASS END=27240011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27240012 . C . PASS END=27240013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 27240014 . G . PASS END=27240018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 27240019 . C . PASS END=27240020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27240021 . G . PASS END=27240040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 27240041 . C . PASS END=27240061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr1 27240062 . C . PASS END=27240062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 27240063 . C . PASS END=27240071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 27240072 . C . PASS END=27240072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 27240073 . T . PASS END=27240076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 27240077 . T . PASS END=27240081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 27240082 . A . PASS END=27240115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:9,0 chr1 27240116 . T . PASS END=27240210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 27240211 . G . PASS END=27240211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 27240212 . G . PASS END=27240230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 27240231 . C . LowGQ END=27240231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 27240232 . A . PASS END=27240258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 27240259 . T . PASS END=27240259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 27240260 . C . PASS END=27240264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 27240265 . C . PASS END=27240289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 27240290 . G . PASS END=27240332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 27240333 . G . PASS END=27240335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 27240336 . G . PASS END=27240336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 27240337 . A . PASS END=27240338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 27240339 . A . PASS END=27240339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 27240340 . G . PASS END=27240342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 27240343 . T . PASS END=27240343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 27240344 . T . PASS END=27240344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 27240345 . G . PASS END=27240352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 27240353 . A . PASS END=27240353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 27240354 . G . PASS END=27240361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27240362 . G . PASS END=27240365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 27240366 . G . PASS END=27240366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 27240367 . T . PASS END=27240416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,604:0,45,255:17,0 chr1 27240417 . T . PASS END=27240417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr1 27240418 . T . PASS END=27240419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27240420 . G . PASS END=27240431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 27248340 . A . PASS END=27248344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,1008:0,68,255:26,0 chr1 27248345 . C . PASS END=27248345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 27248346 . G . PASS END=27248346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 27248347 . G . PASS END=27248370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1063:0,84,255:31,0 chr1 27248371 . A . PASS END=27248371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 27248372 . C . PASS END=27248374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 27248375 . C . PASS END=27248375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 27248376 . A . PASS END=27248379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 27248380 . T . PASS END=27248383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:30:0,78,1170:0,79,255:26,0 chr1 27248384 . G . PASS END=27248385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27248386 . C . PASS END=27248390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 27248391 . G . PASS END=27248391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:24,0 chr1 27248392 . C . PASS END=27248396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 27248397 . C . PASS END=27248398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27248399 . G . PASS END=27248400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 27248401 . A . PASS END=27248415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 27248416 . A . PASS END=27248420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 27250580 . C . PASS END=27250657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:54:0,120,1800:0,126,255:40,0 chr1 27267948 . C . PASS END=27267960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,615:0,54,255:19,0 chr1 27267961 . C . PASS END=27267974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 27267975 . A . PASS END=27267975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 27267976 . A . PASS END=27267979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr1 27267980 . G . PASS END=27267980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 27267981 . C . PASS END=27267990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 27267991 . A . PASS END=27268000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 27268001 . G . PASS END=27268022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:26,0 chr1 27268023 . G . PASS END=27268038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:29,0 chr1 27268039 . A . PASS END=27268051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:26,0 chr1 27268052 . G . PASS END=27268052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27268053 . G . PASS END=27268053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 27268054 . C . PASS END=27268057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:29,0 chr1 27268058 . A . PASS END=27268058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1033:0,44,255:28,0 chr1 27268059 . C . PASS END=27268109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1124:0,82,255:32,0 chr1 27268110 . A . PASS END=27268110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,920:0,76,255:27,0 chr1 27268111 . C . PASS END=27268151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1111:0,90,255:33,0 chr1 27268244 . A . PASS END=27268247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1459:0,107,255:40,0 chr1 27268248 . A . PASS END=27268248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:45:41:0,45,1305:0,45,255:39,0 chr1 27268249 . G . PASS END=27268283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,105,1477:0,113,255:40,0 chr1 27268284 . G . PASS END=27268284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1329:0,65,255:35,0 chr1 27268285 . C . PASS END=27268309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1271:0,89,255:36,0 chr1 27269151 . G . PASS END=27269260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:41:0,99,1528:0,99,255:40,0 chr1 27269261 . G . PASS END=27269261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1473:0,79,255:38,0 chr1 27269262 . C . PASS END=27269267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,105,1510:0,107,255:38,0 chr1 27269362 . C . PASS END=27269392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1186:0,83,255:32,0 chr1 27269393 . T . PASS END=27269393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 27269394 . G . PASS END=27269493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1225:0,86,255:39,0 chr1 27269494 . A . PASS END=27269497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,987:0,66,255:26,0 chr1 27269498 . T . PASS END=27269498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1052:0,82,255:27,0 chr1 27269499 . G . PASS END=27269499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,926:0,35,255:25,0 chr1 27269500 . G . PASS END=27269515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:30:0,82,1067:0,82,255:30,0 chr1 27269516 . T . PASS END=27269516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:28,0 chr1 27269517 . C . PASS END=27269517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 27269518 . A . PASS END=27269518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 27269519 . T . PASS END=27269519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:28,0 chr1 27269520 . T . PASS END=27269520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 27269521 . G . PASS END=27269523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 27269524 . G . PASS END=27269524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr1 27269525 . A . PASS END=27269531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 27269532 . G . PASS END=27269532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27269533 . G . PASS END=27269534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27269535 . G . PASS END=27269541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,77,255:26,0 chr1 27269542 . G . PASS END=27269542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 27269543 . T . PASS END=27269556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 27271881 . A . PASS END=27271964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1227:0,87,255:39,0 chr1 27272059 . C . PASS END=27272060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1086:0,77,255:30,0 chr1 27272061 . G . PASS END=27272096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1177:0,80,255:36,0 chr1 27272097 . A . PASS END=27272097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr1 27272098 . A . PASS END=27272175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:36:0,81,1307:0,81,255:40,0 chr1 27272176 . A . PASS END=27272176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1188:0,53,255:33,0 chr1 27272177 . A . PASS END=27272177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 27272621 . G . PASS END=27272672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:43:0,102,1485:0,102,255:40,0 chr1 27276560 . T . PASS END=27276574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:25,0 chr1 27276575 . G . PASS END=27276575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 27276576 . A . PASS END=27276595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,872:0,75,255:26,0 chr1 27276596 . G . PASS END=27276600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 27276601 . T . PASS END=27276601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 27276602 . G . PASS END=27276608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 27276609 . C . PASS END=27276609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 27276610 . C . PASS END=27276625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 27276626 . A . PASS END=27276626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:25,0 chr1 27276627 . T . PASS END=27276642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 27277173 . C . PASS END=27277197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:49:0,95,1759:0,95,255:40,0 chr1 27277198 . C . PASS END=27277247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,114,1710:0,123,255:40,0 chr1 27277833 . C . PASS END=27277837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27277838 . T . PASS END=27277838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 27277839 . G . PASS END=27277860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,436:0,42,255:16,0 chr1 27277861 . G . PASS END=27277861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 27277862 . G . PASS END=27277872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,485:0,48,255:18,0 chr1 27277873 . A . PASS END=27277873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,537:0,10,255:16,0 chr1 27277874 . C . PASS END=27277876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 27277877 . T . PASS END=27277882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 27277883 . G . PASS END=27277919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 27277920 . C . PASS END=27277929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 27277930 . C . PASS END=27277930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 27277931 . T . PASS END=27277938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:26,0 chr1 27277939 . A . PASS END=27277939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 27277940 . G . PASS END=27277949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 27277950 . T . PASS END=27277951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27277952 . C . PASS END=27277952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27277953 . G . PASS END=27277957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27277958 . C . PASS END=27277971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 27277972 . G . PASS END=27277986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 27277987 . G . PASS END=27277987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 27277988 . C . PASS END=27277988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27277989 . C . PASS END=27277989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 27277990 . C . PASS END=27278123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1237:0,90,255:38,0 chr1 27278124 . G . PASS END=27278124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:31,0 chr1 27278125 . C . PASS END=27278135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1172:0,83,255:31,0 chr1 27278136 . T . PASS END=27278158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:25:0,68,1030:0,68,255:26,0 chr1 27278159 . T . PASS END=27278159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:22,0 chr1 27278160 . C . PASS END=27278215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 27278216 . A . PASS END=27278216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 27278217 . A . PASS END=27278225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,868:0,61,255:23,0 chr1 27278226 . A . PASS END=27278226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:18,0 chr1 27278227 . C . PASS END=27278234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 27278235 . A . PASS END=27278236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 27278237 . C . PASS END=27278237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27278238 . C . PASS END=27278238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27278239 . A . PASS END=27278239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:18,0 chr1 27278240 . C . PASS END=27278249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 27278250 . T . PASS END=27278250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,615:0,21,255:18,0 chr1 27278251 . G . PASS END=27278251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27278252 . G . PASS END=27278252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 27278253 . C . PASS END=27278253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27278254 . A . PASS END=27278254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 27278255 . A . PASS END=27278257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27278258 . G . PASS END=27278258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27278259 . T . PASS END=27278280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 27278281 . G . PASS END=27278281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 27278282 . G . PASS END=27278283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 27278284 . T . PASS END=27278284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 27278285 . G . PASS END=27278309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 27278310 . A . PASS END=27278321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 27278322 . C . PASS END=27278325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 27278326 . A . PASS END=27278326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 27278327 . G . PASS END=27278340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 27278341 . G . PASS END=27278350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 27278351 . T . PASS END=27278352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:13:0,21,315:0,39,255:7,0 chr1 27278353 . G . PASS END=27278353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 27278354 . G . PASS END=27278356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 27278357 . T . PASS END=27278357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:9,0 chr1 27278358 . A . PASS END=27278361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 27278362 . A . PASS END=27278362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 27278363 . G . PASS END=27278366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 27278367 . T . PASS END=27278370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 27278371 . T . PASS END=27278371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:8,0 chr1 27278372 . T . PASS END=27278389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr1 27278390 . T . LowGQ END=27278392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:9:0,0,213:1,0,249:9,2 chr1 27278393 . C . PASS END=27278406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 27278407 . C . PASS END=27278410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:8,0 chr1 27278411 . G . PASS END=27278411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27278412 . T . PASS END=27278412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr1 27278413 . T . PASS END=27278414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 27278415 . A . PASS END=27278415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 27278416 . C . PASS END=27278421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 27278422 . C . PASS END=27278426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 27278427 . G . PASS END=27278448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 27278449 . T . PASS END=27278449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 27278450 . G . PASS END=27278490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 27278491 . C . PASS END=27278495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 27278496 . T . PASS END=27278496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 27278497 . G . PASS END=27278501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 27278502 . C . PASS END=27278508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 27278509 . C . PASS END=27278534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:23:9:0,23,341:0,23,255:9,0 chr1 27278535 . G . PASS END=27278574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 27278575 . G . PASS END=27278575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 27278576 . A . PASS END=27278582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 27278583 . C . PASS END=27278593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 27278594 . C . PASS END=27278595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 27278596 . G . PASS END=27278596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 27278597 . A . PASS END=27278605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 27278606 . G . PASS END=27278633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 27278634 . G . PASS END=27278645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:6:0,18,217:0,18,217:6,0 chr1 27278646 . G . PASS END=27278691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 27278692 . G . PASS END=27278700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 27278701 . G . PASS END=27278701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr1 27278702 . C . PASS END=27278722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,209:0,18,209:6,0 chr1 27278723 . G . PASS END=27278723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 27278724 . G . PASS END=27278724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 27278725 . G . PASS END=27278738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 27278739 . G . PASS END=27278786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:12,0 chr1 27278787 . T . PASS END=27278787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:10,0 chr1 27278788 . C . PASS END=27278816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 27278817 . A . PASS END=27278820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:23:12:0,23,405:0,23,255:9,0 chr1 27278821 . T . PASS END=27278824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 27278825 . A . PASS END=27278853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 27278854 . G . PASS END=27278871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:6,0 chr1 27320278 . A . PASS END=27320290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,325:0,27,255:9,0 chr1 27320291 . G . PASS END=27320318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:12,0 chr1 27320319 . G . PASS END=27320337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:13,0 chr1 27320338 . A . PASS END=27320340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 27320341 . T . PASS END=27320352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 27320353 . C . PASS END=27320355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27320356 . T C, 91.69 PASS DP=15;MQ=249.93;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,9,0:0,6,0:42:129,45,0,552,45,552:255,45,0:0,0:9.1687e+01,4.1687e+01,2.9459e-04,4.5000e+02,7.6457e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,9:0,0,8,7 chr1 27320357 . G . PASS END=27320357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27320358 . G . PASS END=27320393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 27320394 . T . PASS END=27320397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 27320398 . A . LowGQ END=27320398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,402:0,0,255:12,0 chr1 27320399 . C . PASS END=27320443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 27320444 . A . PASS END=27320444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 27320445 . C . PASS END=27320446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27320447 . C . PASS END=27320448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 27320449 . G . PASS END=27320450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 27320451 . T . PASS END=27320500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 27320501 . A . PASS END=27320557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr1 27320558 . C . PASS END=27320579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:3:0,6,90:0,9,116:3,0 chr1 27320580 . G . PASS END=27320587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 27320588 . C . PASS END=27320601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 27320602 . C . PASS END=27320713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 27320714 . A . PASS END=27320731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:3:0,9,116:0,9,116:3,0 chr1 27320732 . G . PASS END=27320733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 27320734 . G . LowDepth;LowGQ END=27320896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 27320897 . G . PASS END=27320942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 27320943 . C . LowGQ END=27320943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr1 27320944 . G . PASS END=27320954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 27320955 . G . PASS END=27320956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 27320957 . G . PASS END=27320960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 27320961 . A . LowGQ END=27320961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 27332435 . T . PASS END=27332446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,799:0,66,255:23,0 chr1 27332447 . C . PASS END=27332447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 27332448 . A . PASS END=27332452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:23,0 chr1 27332453 . G . PASS END=27332453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 27332454 . G . PASS END=27332461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:25,0 chr1 27332462 . G . PASS END=27332488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1072:0,82,255:33,0 chr1 27332489 . G . PASS END=27332489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:30,0 chr1 27332490 . G . PASS END=27332506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1125:0,82,255:32,0 chr1 27332507 . A . PASS END=27332507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:27,0 chr1 27332508 . G . PASS END=27332510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 27332511 . G . PASS END=27332533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,978:0,75,255:26,0 chr1 27332534 . T . PASS END=27332534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 27332535 . G . PASS END=27332535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27332536 . G . PASS END=27332542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 27332543 . C . PASS END=27332545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1037:0,71,255:26,0 chr1 27332546 . G . PASS END=27332547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 27332548 . C . PASS END=27332548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 27332549 . C . PASS END=27332549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27332550 . A . PASS END=27332550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 27332551 . G . PASS END=27332563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 27332564 . A . PASS END=27332612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr1 27332613 . T . PASS END=27332613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 27332614 . C . PASS END=27332663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,892:0,62,255:26,0 chr1 27332664 . A . PASS END=27332685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:16:0,41,630:0,41,255:19,0 chr1 27332686 . G . PASS END=27332704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,396:0,33,255:11,0 chr1 27332705 . T . PASS END=27332705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 27332706 . G . PASS END=27332736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:13,0 chr1 27332737 . A . PASS END=27332739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:11:0,15,225:0,33,255:5,0 chr1 27332740 . G . PASS END=27332742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:7,0 chr1 27332743 . C . PASS END=27332743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:7,0 chr1 27332744 . T . PASS END=27332822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 27332823 . T . PASS END=27332823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 27332824 . C . PASS END=27332845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 27332846 . G . PASS END=27332846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 27332847 . C . PASS END=27332850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27332851 . G . PASS END=27332851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 27332852 . C . PASS END=27332852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27332853 . A . PASS END=27332878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 27332879 . G . PASS END=27332879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 27332880 . C . PASS END=27332898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr1 27332899 . C . PASS END=27332920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 27332921 . A . PASS END=27332921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 27332922 . C . PASS END=27332945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,673:0,41,255:19,0 chr1 27332946 . T . PASS END=27332963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 27332964 . A . PASS END=27332986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,690:0,57,255:19,0 chr1 27332987 . G . PASS END=27333018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,893:0,63,255:25,0 chr1 27333019 . A . PASS END=27333019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 27333020 . C . PASS END=27333096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,797:0,62,255:26,0 chr1 27333097 . C . PASS END=27333098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 27333099 . A . PASS END=27333102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 27333103 . A . PASS END=27333103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,746:0,34,255:22,0 chr1 27333104 . C . PASS END=27333114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 27333115 . C . PASS END=27333116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 27333117 . T . PASS END=27333117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 27333118 . T . PASS END=27333122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 27333123 . C . PASS END=27333123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 27333124 . C . PASS END=27333126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:30,0 chr1 27333127 . T . PASS END=27333139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,74,255:26,0 chr1 27333140 . T . PASS END=27333140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27333141 . G . PASS END=27333141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:23,0 chr1 27333142 . A . PASS END=27333143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27333144 . A . PASS END=27333146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 27333147 . A . PASS END=27333147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 27333148 . G . PASS END=27333160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:30,0 chr1 27333161 . C . PASS END=27333161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 27333162 . G . PASS END=27333182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,1196:0,85,255:32,0 chr1 27333183 . A . PASS END=27333183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 27333184 . G . PASS END=27333219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 27333220 . T . PASS END=27333221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27333222 . A . PASS END=27333228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 27333229 . C . PASS END=27333232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 27333233 . G . PASS END=27333236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27333237 . A . PASS END=27333239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1064:0,76,255:26,0 chr1 27333240 . C . PASS END=27333251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:30,0 chr1 27333252 . A . PASS END=27333252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 27333253 . A . PASS END=27333297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1133:0,83,255:33,0 chr1 27333298 . A . PASS END=27333298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:30,0 chr1 27333299 . T . PASS END=27333307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 27333308 . G . PASS END=27333357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,878:0,61,255:26,0 chr1 27333358 . T . PASS END=27333358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:22,0 chr1 27333359 . C . PASS END=27333377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 27333378 . C . PASS END=27333378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr1 27333379 . T . PASS END=27333379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 27333380 . G . PASS END=27333383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 27333384 . G . PASS END=27333393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 27333394 . G . PASS END=27333408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,52,255:17,0 chr1 27333409 . G . PASS END=27333435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 27333436 . T . PASS END=27333444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27333445 . C . PASS END=27333445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 27333446 . C . PASS END=27333448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 27338898 . C . PASS END=27338920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:18,0 chr1 27338921 . C . PASS END=27338928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:25,0 chr1 27338929 . G . PASS END=27338930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 27338931 . G . PASS END=27338934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27338935 . A . PASS END=27338942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:29,0 chr1 27338943 . G . PASS END=27338943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 27338944 . C . PASS END=27338965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:31,0 chr1 27338966 . C . PASS END=27338966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 27338967 . G . PASS END=27339056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1274:0,95,255:40,0 chr1 27339057 . G . PASS END=27339057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1317:0,73,255:33,0 chr1 27339058 . C . PASS END=27339065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,95,255:34,0 chr1 27339066 . T . PASS END=27339091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1202:0,83,255:31,0 chr1 27339092 . T . PASS END=27339102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1100:0,74,255:26,0 chr1 27339103 . G T, 45.42 PASS DP=28;MQ=250.00;MQRankSum=4.243;ReadPosRankSum=1.682;FractionInformativeReads=0.964;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,10,0:0.370,0.000:27:11,3,0:6,7,0:45:80,0,50,300,600,900:255,0,255:17,0:4.5422e+01,1.4626e-04,5.3000e+01,3.0001e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,5,5:9,8,4,6 chr1 27339104 . T . PASS END=27339111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,976:0,68,255:27,0 chr1 27339112 . T . PASS END=27339112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,895:0,45,255:24,0 chr1 27339113 . G . PASS END=27339131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 27339132 . G . PASS END=27339135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 27339136 . T . PASS END=27339139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:19,0 chr1 27339140 . C . PASS END=27339140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 27339141 . T . PASS END=27339157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,676:0,54,255:19,0 chr1 27339158 . T . PASS END=27339158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr1 27339159 . C . PASS END=27339161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr1 27426798 . T . PASS END=27426824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 27426825 . T . PASS END=27426833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 27426834 . A . PASS END=27426834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27426835 . G . PASS END=27426842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 27426843 . G . PASS END=27426868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 27426869 . G . PASS END=27426904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:33,0 chr1 27426905 . C . PASS END=27426905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr1 27426906 . G . PASS END=27426996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1059:0,85,255:36,1 chr1 27426997 . T . PASS END=27426997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,965:0,58,255:29,0 chr1 27426998 . T . PASS END=27427003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:33,0 chr1 27427004 . G . PASS END=27427014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1241:0,89,255:32,0 chr1 27427015 . A . PASS END=27427015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 27427016 . A . PASS END=27427020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1164:0,83,255:28,0 chr1 27427021 . A . PASS END=27427029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:28:0,66,685:0,66,255:25,0 chr1 27427030 . C . PASS END=27427030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:23,0 chr1 27427031 . C . PASS END=27427040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 27427041 . T C, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,15,0:0,10,0:72:160,75,0,960,75,960:255,78,0:0,0:1.2224e+02,7.2239e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,17:0,0,12,13 chr1 27427042 . T . PASS END=27427042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:24,0 chr1 27427043 . C . PASS END=27427070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 27427071 . C . PASS END=27427078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 27427079 . A . PASS END=27427081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27427082 . C . PASS END=27427082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27427083 . C . PASS END=27427084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27427085 . G . PASS END=27427094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 27427095 . G . PASS END=27427130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 27427131 . T . PASS END=27427134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27427135 . T . PASS END=27427135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27427694 . C . PASS END=27427704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 27427705 . C . PASS END=27427705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 27427706 . G . PASS END=27427707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 27427708 . G . PASS END=27427708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr1 27427709 . C . PASS END=27427754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,606:0,60,255:22,0 chr1 27427755 . G . PASS END=27427766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 27428216 . C . PASS END=27428216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 27428217 . T . PASS END=27428217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 27428218 . T . PASS END=27428222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr1 27428223 . T . PASS END=27428223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 27428224 . C . PASS END=27428248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1088:0,87,255:30,0 chr1 27428249 . G . PASS END=27428249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 27428250 . A . PASS END=27428256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 27428257 . T . PASS END=27428257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 27428258 . C . PASS END=27428283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1243:0,89,255:34,0 chr1 27428284 . C . PASS END=27428294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:32,0 chr1 27428295 . G . PASS END=27428299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1086:0,66,255:26,0 chr1 27428300 . T . PASS END=27428301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 27428302 . T . PASS END=27428309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1062:0,74,255:27,0 chr1 27428310 . G . PASS END=27428317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr1 27428507 . C . PASS END=27428518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 27428519 . C . PASS END=27428530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 27428531 . G . PASS END=27428552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 27428553 . T . PASS END=27428553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 27428554 . C . PASS END=27428578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:23,0 chr1 27428579 . T . PASS END=27428579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 27428580 . G . PASS END=27428585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:23,0 chr1 27428586 . A . PASS END=27428586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 27428587 . T . PASS END=27428596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:23,0 chr1 27428597 . A . PASS END=27428598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 27428599 . G . PASS END=27428602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 27428603 . G . PASS END=27428603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 27428604 . G . PASS END=27428617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 27428618 . G . PASS END=27428621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27428876 . T . PASS END=27428876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 27428877 . G . PASS END=27428877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 27428878 . C . PASS END=27428878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 27428879 . A . PASS END=27428879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 27428880 . T . PASS END=27428885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 27428886 . C . PASS END=27428888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 27428889 . T . PASS END=27428891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27428892 . A . PASS END=27428905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:24,0 chr1 27428906 . A . PASS END=27428906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 27428907 . T . PASS END=27428912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,804:0,75,255:25,0 chr1 27428913 . C . PASS END=27428913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 27428914 . C . PASS END=27428917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 27428918 . C . PASS END=27428923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 27428924 . C . PASS END=27428927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27428928 . C . PASS END=27428932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27428933 . A . PASS END=27428934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27428935 . C . PASS END=27428935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27428936 . T . PASS END=27428941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27428942 . G . PASS END=27428942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27428943 . C . PASS END=27428943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr1 27428944 . C . PASS END=27428954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27428955 . C . PASS END=27428955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 27428956 . C . PASS END=27428996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1063:0,84,255:31,0 chr1 27428997 . G . PASS END=27428997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 27428998 . C . PASS END=27429004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 27429005 . G . PASS END=27429013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 27429014 . C . PASS END=27429014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:24,0 chr1 27429015 . A . PASS END=27429032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,986:0,70,255:26,0 chr1 27429033 . T . PASS END=27429033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 27429034 . A . PASS END=27429038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 27429039 . A . PASS END=27429049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,52,255:19,0 chr1 27429164 . T . PASS END=27429224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1177:0,80,255:38,0 chr1 27429225 . G . PASS END=27429227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27429228 . C . PASS END=27429228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27429229 . C . PASS END=27429231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27429232 . G . PASS END=27429232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27429233 . A . PASS END=27429233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27429234 . A . PASS END=27429234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27429714 . C . PASS END=27429803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1305:0,104,255:40,0 chr1 27432193 . T . PASS END=27432197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,454:0,45,255:15,0 chr1 27432198 . T . PASS END=27432198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 27432199 . T . PASS END=27432201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 27432202 . G . PASS END=27432202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr1 27432203 . A . PASS END=27432217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,598:0,44,255:19,0 chr1 27432218 . G . PASS END=27432223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 27432224 . A . PASS END=27432224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 27432225 . A . PASS END=27432244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,776:0,62,255:26,0 chr1 27432245 . A . PASS END=27432247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27432248 . T . PASS END=27432248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 27432249 . C . PASS END=27432287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1134:0,83,255:33,0 chr1 27432288 . A . PASS END=27432288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 27432289 . T . PASS END=27432301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 27432302 . G . PASS END=27432302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27432303 . C . PASS END=27432304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27432305 . T . PASS END=27432305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 27432306 . T . PASS END=27432310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 27432311 . T . PASS END=27432313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 27432314 . T . PASS END=27432335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:30,0 chr1 27432336 . G . PASS END=27432336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr1 27432337 . G . PASS END=27432514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1215:0,90,255:40,0 chr1 27432515 . T . PASS END=27432516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 27432517 . G . PASS END=27432528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1177:0,80,255:28,0 chr1 27432529 . C . PASS END=27432539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr1 27432540 . T . PASS END=27432540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 27432541 . A . PASS END=27432554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 27432555 . T . PASS END=27432555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 27432556 . G . PASS END=27432557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 27432558 . A . PASS END=27432573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr1 27432574 . C . PASS END=27432578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,51,255:10,0 chr1 27434139 . C . PASS END=27434140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27434141 . A . PASS END=27434141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr1 27434142 . G . PASS END=27434142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr1 27434143 . C . PASS END=27434143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27434144 . A . LowGQ END=27434144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,377:5,0,255:11,0 chr1 27434145 . C . PASS END=27434147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 27434148 . G . PASS END=27434148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 27434149 . G . PASS END=27434155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,470:0,45,255:15,0 chr1 27434156 . A . PASS END=27434156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,553:0,23,255:16,0 chr1 27434157 . G . PASS END=27434163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,637:0,40,255:18,0 chr1 27434164 . G . PASS END=27434164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 27434165 . A . PASS END=27434169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:19,0 chr1 27434170 . G . PASS END=27434179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 27434180 . A . PASS END=27434180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 27434181 . C . PASS END=27434181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 27434182 . G . PASS END=27434189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 27434190 . A . PASS END=27434190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:16,0 chr1 27434191 . G . PASS END=27434209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:19,0 chr1 27434210 . G . PASS END=27434210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:16,0 chr1 27434211 . C . PASS END=27434213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 27434214 . C . PASS END=27434215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27434216 . G . PASS END=27434216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr1 27434217 . T . PASS END=27434217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27434218 . G . PASS END=27434218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 27434219 . G . PASS END=27434219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27434220 . A . PASS END=27434220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 27434221 . G . PASS END=27434221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 27434222 . A . PASS END=27434222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 27434223 . C . PASS END=27434232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 27434233 . G . PASS END=27434233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 27434234 . A . PASS END=27434243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,740:0,63,255:22,0 chr1 27434244 . G . LowGQ END=27434244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,6:23:0:23:0,0,477:31,0,255:15,0 chr1 27434245 . G . PASS END=27434246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,654:0,36,255:18,0 chr1 27434247 . T . PASS END=27434247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,558:0,19,255:17,0 chr1 27434248 . C . PASS END=27434289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:24,0 chr1 27434290 . G . PASS END=27434290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 27434291 . G . PASS END=27434316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 27434317 . C . PASS END=27434337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:17,0 chr1 27434338 . C . PASS END=27434356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:10:0,30,365:0,30,255:11,0 chr1 27436018 . G . PASS END=27436018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 27436019 . C . PASS END=27436019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 27436020 . C . PASS END=27436020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 27436021 . A . PASS END=27436021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 27436022 . T . PASS END=27436022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 27436023 . G . PASS END=27436023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 27436024 . A . PASS END=27436024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 27436025 . T . PASS END=27436025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 27436026 . G . PASS END=27436026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 27436027 . C . PASS END=27436027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 27436028 . C . PASS END=27436028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 27436029 . T . PASS END=27436029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 27436030 . G . PASS END=27436032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 27436033 . A . PASS END=27436035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 27436036 . T . PASS END=27436036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 27436037 . G . PASS END=27436038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 27436039 . A . PASS END=27436040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 27436041 . G . PASS END=27436041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:21,0 chr1 27436042 . A . PASS END=27436044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,709:0,66,255:22,0 chr1 27436045 . T . PASS END=27436045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 27436046 . C . PASS END=27436046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 27436047 . G . PASS END=27436047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 27436048 . G . PASS END=27436048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 27436049 . C . PASS END=27436050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 27436051 . G . PASS END=27436051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 27436052 . A . PASS END=27436054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 27436055 . A . PASS END=27436057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 27436058 . A . PASS END=27436059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 27436060 . G . PASS END=27436060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 27436061 . C . PASS END=27436061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27436062 . C . PASS END=27436065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 27436066 . T . PASS END=27436069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1102:0,87,255:31,0 chr1 27436070 . T . PASS END=27436070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 27436071 . G . PASS END=27436071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 27436072 . T . PASS END=27436072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:31,0 chr1 27436073 . A . PASS END=27436084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1156:0,85,255:33,0 chr1 27436085 . A . PASS END=27436085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1144:0,66,255:32,0 chr1 27436086 . G . PASS END=27436117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1202:0,86,255:34,0 chr1 27436118 . A . PASS END=27436118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1048:0,69,255:29,0 chr1 27436119 . T . PASS END=27436184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:33:0,93,1349:0,98,255:40,0 chr1 27436185 . G . PASS END=27436185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:36,0 chr1 27436186 . A . PASS END=27436234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1305:0,93,255:38,0 chr1 27436235 . A . PASS END=27436235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 27436236 . G . PASS END=27436237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 27436238 . T . PASS END=27436239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 27436240 . G . PASS END=27436242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27436243 . A . PASS END=27436243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 27436244 . A . PASS END=27436248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,89,255:28,0 chr1 27436249 . T . PASS END=27436249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,0 chr1 27436250 . C . PASS END=27436252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27436253 . A . PASS END=27436264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 27436265 . G . PASS END=27436268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 27440317 . C . PASS END=27440323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 27440324 . A . PASS END=27440324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,837:0,31,255:24,0 chr1 27440325 . C . PASS END=27440326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 27440327 . G . PASS END=27440332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,995:0,84,255:29,0 chr1 27440333 . T . PASS END=27440333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:27,0 chr1 27440334 . T . PASS END=27440349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1027:0,87,255:32,0 chr1 27440350 . A . PASS END=27440350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1108:0,52,255:30,0 chr1 27440351 . A . PASS END=27440390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1150:0,83,255:36,0 chr1 27440391 . C . PASS END=27440391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 27440392 . A . PASS END=27440414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1234:0,89,255:36,0 chr1 27440415 . G . PASS END=27440415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:27,0 chr1 27440416 . G . PASS END=27440428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1227:0,88,255:33,0 chr1 27440429 . A . PASS END=27440429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1119:0,72,255:29,0 chr1 27440430 . T . PASS END=27440436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:32,0 chr1 27440437 . G . PASS END=27440437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr1 27440438 . C . PASS END=27440465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1158:0,80,255:33,0 chr1 27440466 . T . PASS END=27440467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:28,0 chr1 27440468 . T . PASS END=27440478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:29,0 chr1 27440479 . C . PASS END=27440479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr1 27440480 . T . PASS END=27440480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 27440481 . C . PASS END=27440481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:28,0 chr1 27440482 . A . PASS END=27440491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:30,0 chr1 27440492 . A . PASS END=27440492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 27440493 . G . PASS END=27440494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27440495 . C . PASS END=27440513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,809:0,60,255:25,0 chr1 27440514 . C . PASS END=27440514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 27440515 . G . PASS END=27440520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,886:0,61,255:26,0 chr1 27440521 . G . PASS END=27440523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 27440524 . G . PASS END=27440525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,968:0,65,255:27,0 chr1 27440526 . A . PASS END=27440526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 27440527 . G . PASS END=27440529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27440530 . G . PASS END=27440553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:30,0 chr1 27440554 . A . PASS END=27440557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:31:0,60,970:0,60,255:30,0 chr1 27440558 . A . PASS END=27440558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1084:0,30,255:26,0 chr1 27440559 . T . PASS END=27440560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1196:0,85,255:28,0 chr1 27440561 . A . PASS END=27440561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:27,0 chr1 27440562 . G . PASS END=27440565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:30,0 chr1 27440566 . G . PASS END=27440568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 27440569 . G . PASS END=27440569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:28,0 chr1 27440570 . C . PASS END=27440570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 27440571 . C . PASS END=27440571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27440572 . C . PASS END=27440572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 27440573 . A . PASS END=27440575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 27440576 . T . PASS END=27440576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1048:0,62,255:28,0 chr1 27440577 . T . PASS END=27440578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 27440579 . T . PASS END=27440580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 27440581 . T . PASS END=27440582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27440583 . T . PASS END=27440584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1031:0,71,255:28,0 chr1 27440585 . A . PASS END=27440586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 27440587 . C . PASS END=27440587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 27440588 . T . PASS END=27440588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 27440589 . G . PASS END=27440589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:29,0 chr1 27440590 . C . PASS END=27440591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 27440592 . G . PASS END=27440595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1141:0,80,255:30,0 chr1 27440596 . T . PASS END=27440596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:28,0 chr1 27440597 . G . PASS END=27440605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1156:0,83,255:33,0 chr1 27440606 . T . PASS END=27440606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:32,0 chr1 27440607 . A . PASS END=27440607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 27440608 . G . PASS END=27440608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 27440609 . C . PASS END=27440617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:31,0 chr1 27440618 . A . PASS END=27440619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1194:0,69,255:33,0 chr1 27440620 . G . PASS END=27440633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:34,0 chr1 27440634 . G . PASS END=27440634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:33,0 chr1 27440635 . C . PASS END=27440640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1263:0,86,255:33,0 chr1 27440641 . G . PASS END=27440641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 27440642 . A . PASS END=27440642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1262:0,89,255:33,0 chr1 27440643 . G . PASS END=27440644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:74:35:0,74,1265:0,74,255:33,0 chr1 27440645 . A . PASS END=27440649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1187:0,91,255:33,0 chr1 27440650 . G . PASS END=27440650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:33,0 chr1 27440651 . A . PASS END=27440653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1239:0,89,255:33,0 chr1 27440654 . T . PASS END=27440654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:29,0 chr1 27440655 . C . PASS END=27440655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:30,0 chr1 27440656 . G . PASS END=27440657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:74:35:0,74,1219:0,74,255:30,0 chr1 27440658 . A . PASS END=27440662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,92,255:31,0 chr1 27440663 . A . PASS END=27440663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1219:0,64,255:30,0 chr1 27440664 . G . PASS END=27440664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 27440665 . G . PASS END=27440666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1181:0,66,255:31,0 chr1 27440667 . A . PASS END=27440672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1157:0,82,255:33,0 chr1 27440673 . G . PASS END=27440673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:30,0 chr1 27440674 . T . PASS END=27440674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1111:0,55,255:30,0 chr1 27440675 . G . PASS END=27440676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1127:0,85,255:32,0 chr1 27440677 . C . PASS END=27440677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr1 27440678 . T . PASS END=27440678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 27440679 . C . PASS END=27440680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:30,0 chr1 27440681 . C . PASS END=27440684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,91,255:31,0 chr1 27440685 . C . PASS END=27440687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:28,0 chr1 27440688 . C . PASS END=27440690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1299:0,83,255:29,0 chr1 27440691 . T . PASS END=27440691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:28,0 chr1 27440692 . G . PASS END=27440694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:38:0,96,1440:0,98,255:32,0 chr1 27440695 . C . PASS END=27440695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:31,0 chr1 27440696 . A . PASS END=27440696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 27440697 . G . PASS END=27440697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1121:0,68,255:26,0 chr1 27440698 . G . PASS END=27440698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 27440699 . C . PASS END=27440699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr1 27440700 . C . PASS END=27440702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:28,0 chr1 27440703 . C . PASS END=27440703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:27,0 chr1 27440704 . C . PASS END=27440705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1224:0,83,255:28,0 chr1 27440706 . C . PASS END=27440706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:27,0 chr1 27440707 . C . PASS END=27440710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 27440711 . A . PASS END=27440711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 27440712 . G . PASS END=27440751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:33,0 chr1 27440752 . T . PASS END=27440765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:27:0,62,961:0,62,255:26,0 chr1 27440766 . T . PASS END=27440767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27440768 . A . PASS END=27440768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27440769 . C . PASS END=27440774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27440775 . A . PASS END=27440776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 27440777 . C . PASS END=27440777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 27447582 . C . PASS END=27447603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,132,255:40,0 chr1 27480474 . C . PASS END=27480474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 27480475 . T . PASS END=27480475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 27480476 . A . PASS END=27480488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr1 27480489 . A . PASS END=27480489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:27,0 chr1 27480490 . G . PASS END=27480505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1209:0,86,255:33,0 chr1 27480506 . A . PASS END=27480506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:31,0 chr1 27480507 . G . PASS END=27480602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:34:0,85,1045:0,85,255:40,0 chr1 27480603 . T . PASS END=27480603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1337:0,73,255:37,0 chr1 27480604 . A . PASS END=27480609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,117,1459:0,117,255:39,0 chr1 27480610 . G . PASS END=27480610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 27480611 . C . PASS END=27480649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:37:0,88,1426:0,88,255:40,0 chr1 27480650 . T . PASS END=27480650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 27480651 . C . PASS END=27480719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1241:0,89,255:36,0 chr1 27480720 . C . PASS END=27480756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1302:0,89,255:34,0 chr1 27480757 . A G, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.521;ReadPosRankSum=3.943;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,20,0:0.645,0.000:31:5,9,0:6,11,0:45:85,0,44,715,365,1080:255,0,255:9,0:5.0000e+01,1.3228e-04,4.6897e+01,4.5000e+02,3.9938e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,11,9:10,1,8,12 chr1 27480758 . A . PASS END=27480762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 27480763 . C . PASS END=27480772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 27480773 . G . PASS END=27480773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27480774 . A . PASS END=27480793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 27480794 . G . PASS END=27480794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 27480795 . A . PASS END=27480795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 27480796 . G . PASS END=27480796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27480797 . A . PASS END=27480811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:19,0 chr1 27480812 . G . PASS END=27480813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 27480814 . C . PASS END=27480816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 27480817 . C . PASS END=27480825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 27587546 . A . PASS END=27587593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,119,1681:0,119,255:40,0 chr1 27589643 . G . PASS END=27589658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:26,0 chr1 27589659 . G . PASS END=27589660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27589661 . T . PASS END=27589661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,999:0,71,255:27,0 chr1 27589662 . T . PASS END=27589666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27589667 . C . PASS END=27589673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 27589674 . A . PASS END=27589703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1185:0,80,255:32,0 chr1 27589704 . T . PASS END=27589704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 27589705 . G . PASS END=27589720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 27589721 . C . PASS END=27589726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 27608730 . G . PASS END=27608776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:37:0,91,1365:0,91,255:40,0 chr1 27609829 . C . PASS END=27609831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 27609832 . G . PASS END=27609832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 27609833 . C . PASS END=27609838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 27609839 . T . PASS END=27609839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 27609840 . C . PASS END=27609841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 27609842 . G . PASS END=27609842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 27609843 . G . PASS END=27609852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 27609853 . C . PASS END=27609855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 27609856 . G . PASS END=27609862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 27609863 . A . PASS END=27609876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 27609877 . G . PASS END=27609877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:26,0 chr1 27609878 . C . PASS END=27609884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 27609885 . A . PASS END=27609886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27609887 . A . PASS END=27609922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 27609923 . A . PASS END=27609923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 27609924 . A . PASS END=27609940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 27614165 . T . PASS END=27614166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 27614167 . C . PASS END=27614167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr1 27614168 . C . PASS END=27614168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27614169 . T . PASS END=27614169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 27614170 . G . PASS END=27614183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 27614184 . A . PASS END=27614184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 27614185 . C . PASS END=27614186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27614187 . G . PASS END=27614187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 27614188 . C . PASS END=27614189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,698:0,44,255:18,0 chr1 27614190 . T . PASS END=27614190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,541:0,10,255:17,0 chr1 27614191 . C . PASS END=27614200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 27614201 . G . PASS END=27614225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,688:0,44,255:19,0 chr1 27614226 . T . PASS END=27614227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27614228 . C . PASS END=27614229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 27614230 . C . PASS END=27614230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27614231 . G . PASS END=27614231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27614232 . A . PASS END=27614234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 27614235 . T . PASS END=27614236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 27614237 . A . PASS END=27614238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27614239 . A . PASS END=27614239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 27614240 . G . PASS END=27614242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 27614243 . A . PASS END=27614243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 27614244 . A . PASS END=27614244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 27614245 . G . PASS END=27614245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 27614246 . G . PASS END=27614255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:23,0 chr1 27614256 . A . PASS END=27614256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 27614257 . C . PASS END=27614267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 27614268 . A . PASS END=27614268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,758:0,58,255:21,0 chr1 27614269 . C . PASS END=27614274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 27614275 . A . PASS END=27614275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 27614276 . A . PASS END=27614313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,780:0,66,255:23,0 chr1 27614314 . C . PASS END=27614314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27614315 . A . PASS END=27614324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr1 27614325 . G . PASS END=27614339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:18,0 chr1 27614340 . A . PASS END=27614340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 27614341 . T . PASS END=27614348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:14,0 chr1 27614349 . T . PASS END=27614352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27618706 . C . PASS END=27618706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27618707 . C . PASS END=27618707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27618708 . A . PASS END=27618708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 27618709 . G . PASS END=27618710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 27618711 . A . PASS END=27618711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 27618712 . T . PASS END=27618720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 27618721 . A . PASS END=27618732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,932:0,81,255:29,0 chr1 27618733 . A . PASS END=27618733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,747:0,56,255:28,0 chr1 27618734 . C . PASS END=27618738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1164:0,93,255:31,0 chr1 27618739 . G . PASS END=27618739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 27618740 . G . PASS END=27618759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1140:0,83,255:33,0 chr1 27618760 . A . PASS END=27618762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 27618763 . G . PASS END=27618782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 27618783 . A . PASS END=27618793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1022:0,68,255:26,0 chr1 27618794 . C . PASS END=27618794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 27618795 . T . PASS END=27618797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 27618798 . C . PASS END=27618798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27618799 . T . PASS END=27618799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 27618800 . G . PASS END=27618802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27618803 . A . PASS END=27618805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27618806 . C . PASS END=27618808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27618809 . C . PASS END=27618823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,892:0,72,255:26,0 chr1 27618824 . C . PASS END=27618824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 27618825 . T . PASS END=27618845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 27618846 . C . PASS END=27618856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 27618857 . C . PASS END=27618884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,35,255:13,0 chr1 27618885 . A . PASS END=27618885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 27618886 . C . PASS END=27618888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 27620513 . A . PASS END=27620591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:33:0,96,1433:0,99,255:40,0 chr1 27620592 . C . PASS END=27620592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:31,0 chr1 27620593 . A . PASS END=27620602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:32,0 chr1 27620603 . A . PASS END=27620607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:26,0 chr1 27621005 . G . PASS END=27621120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:85:44:0,85,1503:0,85,255:40,4 chr1 27622817 . G . PASS END=27622892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:98:45:0,98,1618:0,98,255:40,0 chr1 27623391 . A . PASS END=27623406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 27623407 . A . PASS END=27623408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27623409 . G . PASS END=27623426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr1 27623427 . A . PASS END=27623444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:26,0 chr1 27623445 . C . PASS END=27623503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1047:0,81,255:34,0 chr1 27623539 . A . PASS END=27623558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 27623559 . T . PASS END=27623560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27623561 . C . PASS END=27623569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 27623570 . T . PASS END=27623581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,84,255:22,0 chr1 27623582 . T . PASS END=27623583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 27623584 . T . PASS END=27623584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:17,0 chr1 27623585 . G . PASS END=27623625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 27623626 . C . PASS END=27623639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 27623640 . C . PASS END=27623647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 27624429 . C . PASS END=27624430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27624431 . C . PASS END=27624437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:27,0 chr1 27624438 . A . PASS END=27624438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 27624439 . G . PASS END=27624439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 27624440 . A . PASS END=27624440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 27624441 . G . PASS END=27624583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1047:0,84,255:40,1 chr1 27624584 . C . PASS END=27624597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:28:0,63,945:0,79,255:26,0 chr1 27624598 . A . PASS END=27624602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:26:0,54,810:0,68,255:19,0 chr1 27627717 . G . PASS END=27627721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 27627722 . G . PASS END=27627722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 27627723 . T . PASS END=27627734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:23,0 chr1 27627735 . T . PASS END=27627735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:21,0 chr1 27627736 . G . PASS END=27627744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 27627745 . G . PASS END=27627745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 27627746 . A . PASS END=27627763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,894:0,72,255:25,0 chr1 27627764 . C . PASS END=27627777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 27627778 . C . PASS END=27627778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 27627779 . A . PASS END=27627781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27627782 . T . PASS END=27627782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 27627783 . G . PASS END=27627792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr1 27627793 . T . PASS END=27627793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27627794 . T . PASS END=27627801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27627802 . G . PASS END=27627803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 27627804 . C . PASS END=27627806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27627807 . C . PASS END=27627836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 27627837 . A . PASS END=27627847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,806:0,53,255:19,0 chr1 27627848 . G . PASS END=27627849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27627850 . C . PASS END=27627859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 27627860 . T . PASS END=27627880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 27627881 . A . PASS END=27627881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27627882 . G . PASS END=27627884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27627885 . C . PASS END=27627887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27627888 . C . PASS END=27627890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27627891 . C . PASS END=27627903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,46,255:19,0 chr1 27627904 . G . PASS END=27627904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:14,0 chr1 27627905 . C . PASS END=27627919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:16,0 chr1 27627920 . T . PASS END=27627920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 27627921 . C . PASS END=27627923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27627924 . A . PASS END=27627924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 27627925 . G . PASS END=27627936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,531:0,48,255:16,0 chr1 27627937 . T . PASS END=27627938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 27627939 . T . PASS END=27627946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 27627947 . A . PASS END=27627952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:13,0 chr1 27628430 . C . PASS END=27628434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:17,0 chr1 27628435 . C . PASS END=27628441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 27628442 . A . PASS END=27628442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27628443 . C . PASS END=27628472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,716:0,63,255:25,0 chr1 27628473 . C . PASS END=27628486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 27628487 . A . PASS END=27628499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 27628500 . C . PASS END=27628507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1019:0,84,255:30,0 chr1 27628508 . A . PASS END=27628508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 27628509 . G . PASS END=27628560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1025:0,80,255:35,0 chr1 27628561 . A . PASS END=27628597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:37:0,82,1244:0,82,255:39,0 chr1 27628598 . C T,G, 49.83 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0,0:0.475,0.000,0.000:40:13,11,0,0:8,8,0,0:48:85,0,50,672,691,722,672,711,1363,1383:255,0,255:16,0:4.9828e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:7,14,8,11:7,14,12,7 chr1 27628599 . T . PASS END=27628635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,101,1263:0,101,255:40,0 chr1 27628636 . A . PASS END=27628686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:37:0,93,1332:0,100,255:40,0 chr1 27628687 . C . PASS END=27628698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:24:0,63,945:0,72,255:24,0 chr1 27628699 . C . PASS END=27628699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 27628700 . T . PASS END=27628700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 27628701 . G . PASS END=27628713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:16:0,44,675:0,44,255:16,0 chr1 27628714 . T . PASS END=27628714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:12,0 chr1 27628715 . G . PASS END=27628716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27630112 . A . PASS END=27630116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 27630117 . A . PASS END=27630117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 27630118 . A . PASS END=27630118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 27630119 . G . PASS END=27630119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 27630120 . A . PASS END=27630156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 27630157 . G . PASS END=27630157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 27630158 . C . PASS END=27630161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 27630162 . A . PASS END=27630167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 27630168 . A . PASS END=27630168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 27630169 . A . PASS END=27630175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 27630176 . C . PASS END=27630176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27630177 . A . PASS END=27630177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 27630178 . T . PASS END=27630178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,324:0,3,255:9,0 chr1 27630179 . C . PASS END=27630189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,482:0,36,255:13,0 chr1 27630190 . A . PASS END=27630192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 27630193 . T . PASS END=27630194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 27630195 . G . PASS END=27630195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 27630196 . T . PASS END=27630196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 27630197 . G . PASS END=27630205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 27630206 . G . PASS END=27630206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 27630207 . C . PASS END=27630213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 27630214 . A . PASS END=27630214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 27630215 . C . PASS END=27630234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,635:0,51,255:17,0 chr1 27630235 . G . PASS END=27630235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 27630236 . C . PASS END=27630242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 27630243 . T . PASS END=27630243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27630244 . G . PASS END=27630248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27630249 . A . PASS END=27630249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 27630250 . C . PASS END=27630250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27630251 . C . PASS END=27630257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 27630258 . G . PASS END=27630258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 27630259 . A . PASS END=27630265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 27630266 . A . PASS END=27630266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,389:0,25,255:11,0 chr1 27630267 . G . PASS END=27630268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 27630269 . G . PASS END=27630269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 27630270 . G . PASS END=27630272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 27630273 . A . PASS END=27630273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 27630274 . A . PASS END=27630276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 27630277 . T . PASS END=27630277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 27630278 . C . PASS END=27630279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 27630280 . T . LowGQ END=27630280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,286:22,0,255:9,0 chr1 27630281 . T . PASS END=27630281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 27630282 . G . PASS END=27630285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 27630286 . G . PASS END=27630286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 27631492 . C . PASS END=27631492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 27631493 . A . PASS END=27631493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 27631494 . A . PASS END=27631500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:18,0 chr1 27631501 . G . PASS END=27631514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:25,0 chr1 27631515 . G . PASS END=27631547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,995:0,81,255:30,0 chr1 27631548 . A . PASS END=27631548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:28,0 chr1 27631549 . G . PASS END=27631549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27631550 . G . PASS END=27631550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 27631551 . A . PASS END=27631580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1202:0,86,255:34,0 chr1 27631581 . G . PASS END=27631581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 27631582 . G . PASS END=27631605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1123:0,92,255:36,0 chr1 27631606 . G . PASS END=27631608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1327:0,72,255:37,1 chr1 27631609 . G . PASS END=27631655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:37,0 chr1 27631656 . T . PASS END=27631681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:24,0 chr1 27631682 . G . PASS END=27631684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27632677 . A . PASS END=27632697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 27632698 . G . PASS END=27632702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 27632703 . G . PASS END=27632703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 27632704 . G . PASS END=27632704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27632705 . A . PASS END=27632705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,814:0,67,255:26,0 chr1 27632706 . A . PASS END=27632706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27632707 . G . PASS END=27632707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:27,0 chr1 27632708 . A . PASS END=27632708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,800:0,70,255:27,0 chr1 27632709 . T . PASS END=27632709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27632710 . A . PASS END=27632710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,895:0,70,255:27,0 chr1 27632711 . T . PASS END=27632713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27632714 . A . PASS END=27632714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:27,0 chr1 27632715 . G . PASS END=27632722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr1 27632723 . C . PASS END=27632723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 27632724 . A . PASS END=27632724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 27632725 . C . PASS END=27632725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 27632726 . A . PASS END=27632737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr1 27632738 . G . PASS END=27632742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1108:0,77,255:26,0 chr1 27632743 . A . PASS END=27632746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 27632747 . A . PASS END=27632758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,864:0,64,255:26,0 chr1 27632759 . T . PASS END=27632759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 27632760 . G . PASS END=27632795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,908:0,61,255:26,0 chr1 27632796 . G . PASS END=27632796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 27632797 . G . PASS END=27632800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 27632801 . T . PASS END=27632801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 27632802 . G . PASS END=27632805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr1 27632806 . A . PASS END=27632806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 27632807 . G . PASS END=27632846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr1 27632847 . G . PASS END=27632847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27632848 . G . PASS END=27632854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 27632855 . T . PASS END=27632874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:19,0 chr1 27648689 . A . PASS END=27648691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 27648692 . G . PASS END=27648692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 27648693 . C . PASS END=27648696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 27648697 . A . PASS END=27648697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 27648698 . G . PASS END=27648700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 27648701 . G . PASS END=27648701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,209:0,18,209:6,0 chr1 27648702 . A . PASS END=27648702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 27648703 . A . PASS END=27648705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr1 27648706 . G . PASS END=27648706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 27648707 . A . LowGQ END=27648707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:6,0 chr1 27648708 . G . PASS END=27648718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 27648719 . T . PASS END=27648719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 27648720 . T . PASS END=27648729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 27648730 . G . PASS END=27648737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 27648738 . C T, 0.02 DRAGENSnpHardQUAL DP=9;MQ=245.41;MQRankSum=0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:4,0,0:4,1,0:23:12,0,50,36,248,284:12,0,255:6,0:2.3709e-02,2.2642e+01,7.5642e+01,5.8413e+01,3.0578e+02,3.0978e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,1,0:3,5,0,1 chr1 27648739 . C . PASS END=27648739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 27648740 . C . PASS END=27648740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 27648741 . C . PASS END=27648744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 27648745 . C . PASS END=27648749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 27648750 . T . PASS END=27648755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 27648756 . A . PASS END=27648756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 27648757 . A . PASS END=27648767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 27648768 . C . PASS END=27648771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 27648772 . G . LowGQ END=27648772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 27648773 . G . PASS END=27648775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 27648776 . G . PASS END=27648784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 27648785 . G . PASS END=27648849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,527:0,41,255:18,0 chr1 27648850 . C . PASS END=27648850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 27648851 . T . PASS END=27648869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 27648870 . T . PASS END=27648870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 27648871 . C . PASS END=27648877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 27648878 . C . PASS END=27648882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 27657211 . G . PASS END=27657295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,102,1466:0,107,255:40,0 chr1 27657476 . G . PASS END=27657493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 27657494 . T . PASS END=27657494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 27657495 . G . PASS END=27657514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 27658561 . G . PASS END=27658592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,113,1566:0,113,255:40,0 chr1 27658938 . A . PASS END=27658968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,102,1390:0,108,255:39,0 chr1 27659852 . G . PASS END=27659926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1254:0,81,255:40,0 chr1 27660449 . G . PASS END=27660456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 27660457 . A . PASS END=27660498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,1002:0,80,255:38,0 chr1 27660499 . G . PASS END=27660499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:35,0 chr1 27660500 . G . PASS END=27660545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,116,1598:0,116,255:40,0 chr1 27660642 . C . PASS END=27660776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:55:0,120,1800:0,138,255:40,0 chr1 27661158 . G . PASS END=27661174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,881:0,78,255:26,0 chr1 27661175 . G . PASS END=27661177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 27661178 . A . PASS END=27661182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27661870 . C . PASS END=27661897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:34:0,83,1183:0,83,255:39,0 chr1 27661898 . C . PASS END=27661898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1242:0,62,255:36,0 chr1 27661899 . C . PASS END=27661951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:33:0,93,1304:0,94,255:40,0 chr1 27661952 . C . PASS END=27661952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1121:0,68,255:30,0 chr1 27661953 . G . PASS END=27661957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:32,0 chr1 27668801 . A . PASS END=27668805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 27668806 . T . PASS END=27668806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 27668807 . C . PASS END=27668828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,768:0,66,255:25,0 chr1 27668829 . C . PASS END=27668829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 27668830 . A . PASS END=27668830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 27668831 . G . PASS END=27668831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 27668832 . A . PASS END=27668848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 27668849 . C . PASS END=27668850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 27668851 . T . PASS END=27668855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27668856 . C . PASS END=27668858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:18,0 chr1 27671788 . G . PASS END=27671807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 27671808 . G . PASS END=27671828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 27671829 . C . PASS END=27671849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 27671850 . C . PASS END=27671974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,490:0,40,255:19,0 chr1 27671975 . A . PASS END=27671975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:13,0 chr1 27671976 . C . PASS END=27671977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27671978 . A . PASS END=27671979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27671980 . A . PASS END=27671980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 27671981 . T . PASS END=27671994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 27671995 . A . PASS END=27671995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 27671996 . G . PASS END=27671996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 27671997 . C . PASS END=27671997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 27671998 . T . PASS END=27672008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 27672009 . C . PASS END=27672009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 27672010 . G . PASS END=27672016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 27673912 . C . PASS END=27673934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:17,0 chr1 27673935 . A . PASS END=27673943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:22,0 chr1 27673944 . A . PASS END=27673944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 27673945 . G . PASS END=27673968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,909:0,62,255:26,0 chr1 27673969 . G . PASS END=27674026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1125:0,83,255:33,0 chr1 27674027 . C . PASS END=27674060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:25,0 chr1 27674299 . G . PASS END=27674341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 27674342 . G . PASS END=27674342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 27674343 . A . PASS END=27674346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 27674347 . A . PASS END=27674347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr1 27674348 . G . PASS END=27674353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 27674354 . A . PASS END=27674354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 27674355 . G . PASS END=27674371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 27674458 . G . PASS END=27674458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27674459 . C . PASS END=27674459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 27674460 . T . PASS END=27674476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:19,0 chr1 27674477 . C . PASS END=27674482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27674483 . G . PASS END=27674483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 27674484 . A . PASS END=27674489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 27674490 . T . PASS END=27674490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 27674491 . C . PASS END=27674503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,683:0,60,255:20,0 chr1 27675571 . G . PASS END=27675575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr1 27675576 . T . PASS END=27675577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 27675578 . A . PASS END=27675578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:18,0 chr1 27675579 . T . PASS END=27675595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 27675596 . T . PASS END=27675597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27675598 . C . PASS END=27675604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27675605 . A . PASS END=27675605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 27675606 . G . PASS END=27675619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 27675620 . A . PASS END=27675629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 27675630 . C . PASS END=27675630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,620:0,5,255:16,0 chr1 27675631 . C . PASS END=27675641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr1 27675642 . A . PASS END=27675643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 27675889 . A . PASS END=27675961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,576:0,40,255:19,0 chr1 27675962 . G . PASS END=27675962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 27675963 . C . PASS END=27675963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 27675964 . A . PASS END=27675964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 27675965 . G . PASS END=27675973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 27675974 . G . PASS END=27675974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 27675975 . C . PASS END=27675979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27675980 . G . PASS END=27675980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr1 27675981 . C . PASS END=27675982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27675983 . A . PASS END=27675984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr1 27675985 . C . PASS END=27675986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27675987 . C . PASS END=27675987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 27675988 . A . PASS END=27675988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 27675989 . G . PASS END=27675990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27675991 . T . PASS END=27675992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:12,0 chr1 27675993 . G . PASS END=27675997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27675998 . G . PASS END=27675998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27675999 . A . PASS END=27675999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 27676000 . G . PASS END=27676003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:38:14:0,38,585:0,38,255:16,0 chr1 27676004 . C . PASS END=27676004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27676005 . C . PASS END=27676005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 27676006 . C . PASS END=27676006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr1 27676007 . G . PASS END=27676010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 27676011 . C . PASS END=27676011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 27676012 . T . PASS END=27676013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 27676014 . C . PASS END=27676014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 27676015 . T . PASS END=27676015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 27676016 . C . PASS END=27676022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:15:0,34,551:0,34,255:14,0 chr1 27676023 . T . LowGQ END=27676023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:19,0,255:9,0 chr1 27676024 . C . PASS END=27676024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 27676025 . C . LowGQ END=27676025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,382:33,0,255:9,0 chr1 27676026 . G . PASS END=27676027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 27676028 . A . PASS END=27676028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:9,0 chr1 27676029 . G . PASS END=27676029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 27676030 . C . PASS END=27676030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:10,0 chr1 27676031 . G . PASS END=27676032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 27676033 . A . PASS END=27676033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,451:0,14,255:12,0 chr1 27676034 . C . PASS END=27676034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 27676035 . T . LowGQ END=27676035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,357:8,0,255:11,0 chr1 27676036 . C . PASS END=27676036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 27676037 . C . LowGQ END=27676037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,379:19,0,255:12,0 chr1 27676038 . G . PASS END=27676040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:17,0 chr1 27676041 . C . LowGQ END=27676041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,451:27,0,255:15,0 chr1 27676042 . G . PASS END=27676043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:18,0 chr1 27676044 . G . PASS END=27676044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr1 27676045 . G . PASS END=27676045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr1 27676046 . A . PASS END=27676046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,474:0,21,255:16,0 chr1 27676047 . G . LowGQ END=27676047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,518:10,0,255:14,0 chr1 27676048 . C . PASS END=27676048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27676049 . G . PASS END=27676049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,561:0,23,255:16,0 chr1 27676050 . C . PASS END=27676050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 27676051 . T . PASS END=27676051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:15,0 chr1 27676052 . C . PASS END=27676053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:16,0 chr1 27676054 . T . LowGQ END=27676055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,408:13,0,255:14,0 chr1 27676056 . C . PASS END=27676057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 27676058 . C . PASS END=27676058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,564:0,24,255:13,0 chr1 27676059 . A . LowGQ END=27676059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,447:12,0,255:11,0 chr1 27676060 . G . PASS END=27676062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 27676063 . C . PASS END=27676063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,490:0,21,255:13,0 chr1 27676064 . T . LowGQ END=27676064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,5:16:0:16:0,0,344:35,0,255:10,0 chr1 27676065 . G . PASS END=27676065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:13,0 chr1 27676066 . C . PASS END=27676066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27676067 . G . PASS END=27676067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:13,0 chr1 27676068 . A . LowGQ END=27676069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:15:0,0,363:32,0,255:13,0 chr1 27676070 . C . PASS END=27676071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,550:0,45,255:15,0 chr1 27676072 . G . LowGQ END=27676072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,316:21,0,255:11,0 chr1 27676073 . C . PASS END=27676094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:19,0 chr1 27676095 . G . PASS END=27676095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:18,0 chr1 27676096 . C . PASS END=27676098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27676099 . G . PASS END=27676100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27676101 . G . PASS END=27676101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 27676102 . T . PASS END=27676104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 27676105 . G . PASS END=27676105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,571:0,10,255:17,0 chr1 27676106 . G . PASS END=27676106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 27676107 . A . PASS END=27676107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 27676108 . A . PASS END=27676108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 27676109 . A . PASS END=27676111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr1 27676112 . A . PASS END=27676112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:4:20:0,4,537:0,4,255:18,0 chr1 27676113 . G . PASS END=27676114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 27676115 . G . PASS END=27676118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 27676119 . C . PASS END=27676120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 27676121 . C . PASS END=27676121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,694:0,35,255:21,0 chr1 27676122 . C . PASS END=27676122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 27676123 . G . PASS END=27676123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:21,0 chr1 27676124 . T . PASS END=27676133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:22,0 chr1 27676134 . C . PASS END=27676134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 27676135 . C . PASS END=27676141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,953:0,62,255:25,0 chr1 27676142 . G . PASS END=27676146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 27676147 . A . PASS END=27676147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 27676148 . G . PASS END=27676154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 27676155 . T . PASS END=27676155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 27676156 . C . PASS END=27676163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1029:0,90,255:31,0 chr1 27676164 . C . PASS END=27676164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:29,0 chr1 27676165 . T . PASS END=27676166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 27676167 . G . PASS END=27676168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,983:0,76,255:30,0 chr1 27676169 . G . PASS END=27676169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,986:0,46,255:29,0 chr1 27676170 . A . PASS END=27676171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,938:0,76,255:30,0 chr1 27676172 . T . PASS END=27676175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:31,0 chr1 27676176 . G . PASS END=27676176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:28,0 chr1 27676177 . A . PASS END=27676179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 27676180 . A . PASS END=27676180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,958:0,48,255:27,0 chr1 27676181 . G . PASS END=27676181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 27676182 . G . PASS END=27676182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1013:0,57,255:27,0 chr1 27676183 . C . PASS END=27676184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27676185 . C . PASS END=27676186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,956:0,60,255:27,0 chr1 27676187 . G . PASS END=27676187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,873:0,56,255:27,0 chr1 27676188 . G . PASS END=27676189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27676190 . G . PASS END=27676191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 27676192 . C . PASS END=27676218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,955:0,82,255:33,0 chr1 27676219 . G . PASS END=27676219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,986:0,32,255:27,0 chr1 27676220 . C . PASS END=27676223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 27676224 . A . PASS END=27676224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 27676225 . G . PASS END=27676226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 27676227 . T . PASS END=27676227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:27,0 chr1 27676228 . C . PASS END=27676229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27676230 . T . PASS END=27676237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,71,255:25,0 chr1 27676238 . C . PASS END=27676256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:41:18:0,41,657:0,41,255:19,0 chr1 27676463 . C . PASS END=27676463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27676464 . T . PASS END=27676465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 27676466 . A . PASS END=27676466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27676467 . G . LowGQ END=27676467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 27676468 . C . PASS END=27676468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27676469 . G . LowGQ END=27676469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr1 27676470 . G . PASS END=27676470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 27676471 . C . PASS END=27676472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27676473 . G . LowGQ END=27676473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr1 27676474 . C . PASS END=27676475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 27676476 . A . LowGQ END=27676477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:1,0,255:9,0 chr1 27676478 . A . PASS END=27676479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 27676480 . G . LowGQ END=27676480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 27676481 . A . PASS END=27676481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27676482 . G . LowGQ END=27676482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 27676483 . C . PASS END=27676484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27676485 . T . LowGQ END=27676485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,294:1,0,255:9,0 chr1 27676486 . G . PASS END=27676487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27676488 . C . PASS END=27676488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27676489 . A . PASS END=27676489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27676490 . G . LowGQ END=27676490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 27676491 . G . PASS END=27676491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27676492 . C . PASS END=27676492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27676493 . G . PASS END=27676494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27676495 . C . PASS END=27676495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27676496 . G . LowGQ END=27676496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 27676497 . C . PASS END=27676497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 27676498 . G . PASS END=27676500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27676501 . G . LowGQ END=27676501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 27676502 . G . PASS END=27676502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 27676503 . C . PASS END=27676503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 27676504 . G . PASS END=27676507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 27676508 . C . PASS END=27676508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 27676509 . A . PASS END=27676509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 27676510 . G . LowGQ END=27676511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,255:1,0,255:8,0 chr1 27676512 . T . PASS END=27676512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 27676513 . C . PASS END=27676517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 27676518 . G . PASS END=27676536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,233:6,0 chr1 27676537 . G . PASS END=27676539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,233:3,0 chr1 27676540 . C . PASS END=27676549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,155:0,12,155:4,0 chr1 27676550 . G . PASS END=27676623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,55:3,0 chr1 27676880 . C . PASS END=27676976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:33:0,89,1249:0,89,255:40,0 chr1 27677285 . T . PASS END=27677285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 27677286 . A . PASS END=27677286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 27677287 . C . PASS END=27677351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:28:0,84,1035:0,84,255:40,0 chr1 27677352 . T . PASS END=27677352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1527:0,77,255:40,0 chr1 27677353 . G . PASS END=27677422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1215:0,86,255:40,0 chr1 27677423 . T . PASS END=27677423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 27677424 . G . PASS END=27677426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27677427 . T . PASS END=27677431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 27677432 . C . PASS END=27677432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27677433 . T . PASS END=27677443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1037:0,71,255:25,0 chr1 27677749 . G . PASS END=27677784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,892:0,61,255:26,0 chr1 27677785 . T . PASS END=27677785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:24,0 chr1 27677786 . T . PASS END=27677786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 27677787 . A . PASS END=27677787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:24,0 chr1 27677788 . C . PASS END=27677793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,961:0,65,255:26,0 chr1 27677794 . C . PASS END=27677794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27677795 . T . PASS END=27677795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr1 27677796 . G . PASS END=27677805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 27677806 . T . PASS END=27677807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:23,0 chr1 27677808 . C . PASS END=27677812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:23,0 chr1 27677813 . C . PASS END=27677813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:22,0 chr1 27677814 . C . PASS END=27677814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 27677815 . G . PASS END=27677815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 27677816 . C . PASS END=27677816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 27677817 . C . PASS END=27677821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 27677822 . C . PASS END=27677822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:22,0 chr1 27677823 . C . PASS END=27677823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27677824 . G . PASS END=27677825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 27677826 . G . PASS END=27677827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27677947 . G . PASS END=27677986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,652:0,41,255:19,0 chr1 27677987 . G . PASS END=27677987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr1 27677988 . A . PASS END=27678019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:19,0 chr1 27678020 . A . PASS END=27678020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 27678021 . G . PASS END=27678022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 27678023 . A . PASS END=27678023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 27678024 . T . PASS END=27678027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 27678028 . T . PASS END=27678028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 27678029 . G . PASS END=27678043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,662:0,54,255:19,0 chr1 27678044 . A . PASS END=27678046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 27679774 . C . PASS END=27679796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:16,0 chr1 27679797 . A G, 44.99 PASS DP=16;MQ=250.00;MQRankSum=3.059;ReadPosRankSum=3.059;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,5,0:0.312,0.000:16:5,0,0:6,5,0:44:80,0,50,179,393,572:146,0,255:11,0:4.4992e+01,1.5946e-04,5.3000e+01,1.7882e+02,4.2824e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,1,4:3,8,4,1 chr1 27679798 . G . PASS END=27679820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:19,0 chr1 27679821 . T . PASS END=27679834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 27679835 . C . PASS END=27679837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 27679838 . A . PASS END=27679838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27679839 . G . PASS END=27679841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27679842 . C . PASS END=27679843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27679844 . G . PASS END=27679891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 27679892 . C . PASS END=27679893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27679894 . C . PASS END=27679906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:24,0 chr1 27679907 . G . PASS END=27679935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 27679936 . G . PASS END=27679936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 27679937 . G . PASS END=27679945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 27679946 . C . PASS END=27679946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 27679947 . A . PASS END=27679979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr1 27680204 . G . PASS END=27680209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,947:0,62,255:26,0 chr1 27680210 . G . PASS END=27680212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 27680213 . A . PASS END=27680213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 27680214 . T . PASS END=27680229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:30,0 chr1 27680230 . T . PASS END=27680230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 27680231 . G . PASS END=27680302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1119:0,87,255:36,0 chr1 27680303 . G . PASS END=27680314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 27680315 . T . PASS END=27680335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,645:0,54,255:18,0 chr1 27680336 . G . PASS END=27680343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:38:17:0,38,585:0,38,255:13,0 chr1 27681871 . T . PASS END=27681871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 27681872 . C . PASS END=27681874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 27681875 . T . PASS END=27681875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 27681876 . C . PASS END=27681877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 27681878 . G . PASS END=27681882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27681883 . C . PASS END=27681890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:32,0 chr1 27681891 . A . PASS END=27681891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 27681892 . G . PASS END=27681944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1125:0,80,255:35,0 chr1 27681945 . G . PASS END=27681955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1047:0,71,255:25,0 chr1 27681956 . C . PASS END=27681956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 27681957 . T . PASS END=27681959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 27681960 . C . PASS END=27681960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 27682160 . C . PASS END=27682236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,122,255:40,0 chr1 27682517 . C . PASS END=27682518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 27682519 . T . PASS END=27682590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,101,1424:0,101,255:40,0 chr1 27682879 . T . PASS END=27682884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,917:0,78,255:26,0 chr1 27682885 . G . PASS END=27682991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1215:0,82,255:40,0 chr1 27683081 . C . PASS END=27683086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 27683087 . G . PASS END=27683087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27683088 . T . PASS END=27683088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,867:0,70,255:26,0 chr1 27683089 . C . PASS END=27683090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27683091 . C . PASS END=27683092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27683093 . G . PASS END=27683094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27683095 . C . PASS END=27683098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 27683099 . A . PASS END=27683102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 27683103 . G . PASS END=27683103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:26,0 chr1 27683104 . G . PASS END=27683110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 27683111 . T . PASS END=27683111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27683112 . G . PASS END=27683112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr1 27683113 . C . PASS END=27683113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 27683114 . A . PASS END=27683236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1155:0,80,255:40,0 chr1 27683237 . A . PASS END=27683237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 27683238 . C . PASS END=27683240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 27683500 . C . PASS END=27683501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 27683502 . G . PASS END=27683502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 27683503 . G . PASS END=27683507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:25,0 chr1 27683508 . A . PASS END=27683510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 27683511 . A . PASS END=27683512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27683513 . A . PASS END=27683566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1158:0,80,255:33,0 chr1 27683567 . G . PASS END=27683567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:31,0 chr1 27683568 . T . PASS END=27683570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 27683571 . G . PASS END=27683571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:31,0 chr1 27683572 . G . PASS END=27683577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 27683578 . T . PASS END=27683583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 27683584 . G . PASS END=27683584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:25,0 chr1 27683585 . C . PASS END=27683586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27683587 . T . PASS END=27683587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 27683588 . G . PASS END=27683591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27683592 . A . PASS END=27683598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:26,0 chr1 27683599 . G . PASS END=27683605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:27,0 chr1 27683891 . C . PASS END=27683895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 27683896 . C . PASS END=27683896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 27683897 . C . PASS END=27683901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 27683902 . A . PASS END=27683908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27683909 . C . PASS END=27683915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 27683916 . C . PASS END=27683926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 27683927 . C . PASS END=27683928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 27683929 . C . PASS END=27683932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27683933 . C . PASS END=27683935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27683936 . A . PASS END=27683937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27683938 . G . PASS END=27683979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,629:0,48,255:17,0 chr1 27683980 . G . PASS END=27683980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 27683981 . G . PASS END=27684004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:19,0 chr1 27684005 . G . PASS END=27684050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:23,0 chr1 27684051 . C . PASS END=27684065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,729:0,57,255:19,0 chr1 27684066 . C . PASS END=27684067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 27684202 . C . PASS END=27684246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:19,0 chr1 27684247 . C . PASS END=27684253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27684254 . T . PASS END=27684254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27684255 . G . PASS END=27684258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27684259 . C . PASS END=27684269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr1 27684270 . C . PASS END=27684274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:21,0 chr1 27684275 . A . PASS END=27684275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 27684276 . T . PASS END=27684296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 27684297 . G . PASS END=27684297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 27684298 . G . PASS END=27684359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,809:0,63,255:25,0 chr1 27684360 . C . PASS END=27684367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 27684672 . C . PASS END=27684687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 27684688 . C . PASS END=27684701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 27684702 . C . PASS END=27684702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 27684703 . A . PASS END=27684704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 27684705 . C . PASS END=27684705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 27684706 . G . PASS END=27684709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 27684710 . C . PASS END=27684710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr1 27684711 . G . PASS END=27684718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr1 27684719 . G . PASS END=27684721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 27684722 . T . PASS END=27684722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 27684723 . G . PASS END=27684756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,756:0,63,255:24,0 chr1 27684757 . T . PASS END=27684757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 27684758 . C . PASS END=27684773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 27684774 . G . PASS END=27684774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 27684775 . A . PASS END=27684796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,742:0,66,255:22,0 chr1 27684797 . G . PASS END=27684797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 27684798 . G . PASS END=27684802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27684803 . A . PASS END=27684810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:17,0 chr1 27684910 . C . PASS END=27684949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,609:0,44,255:19,0 chr1 27684950 . G . PASS END=27684956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 27684957 . T . PASS END=27684957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 27684958 . T . PASS END=27684963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27684964 . G . PASS END=27684964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 27684965 . C . PASS END=27684965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27684966 . T . PASS END=27684973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 27684974 . G . PASS END=27684974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,681:0,16,255:17,0 chr1 27684975 . G . PASS END=27684976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 27684977 . G . PASS END=27684978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 27684979 . C . PASS END=27684979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:20,0 chr1 27684980 . C . PASS END=27684980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 27684981 . C . PASS END=27684984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 27684985 . G . PASS END=27684989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,837:0,56,255:20,0 chr1 27684990 . G . PASS END=27684992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 27684993 . T . PASS END=27684993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:20,0 chr1 27684994 . G . PASS END=27685004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:21,0 chr1 27685005 . C . PASS END=27685005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 27685006 . G . PASS END=27685011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 27685012 . G . PASS END=27685012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 27685013 . G . PASS END=27685014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27685015 . G . PASS END=27685015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 27685016 . G . PASS END=27685021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 27685022 . C . PASS END=27685022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,560:0,13,255:18,0 chr1 27685023 . T . PASS END=27685025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 27685026 . A . PASS END=27685026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,652:0,29,255:19,0 chr1 27685027 . A . PASS END=27685033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 27685034 . G . PASS END=27685045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,654:0,60,255:20,0 chr1 27685046 . T . PASS END=27685054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27685055 . G . PASS END=27685075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:23,0 chr1 27685076 . T . PASS END=27685076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 27685077 . G . PASS END=27685085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 27685086 . A . PASS END=27685086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 27685087 . C . PASS END=27685088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27685089 . T . PASS END=27685092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:19,0 chr1 27685093 . A . PASS END=27685093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:16,0 chr1 27685094 . C . PASS END=27685102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:19,0 chr1 27685200 . C . PASS END=27685250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1188:0,83,255:35,0 chr1 27685251 . T . PASS END=27685251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:34,0 chr1 27685252 . G . PASS END=27685357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1305:0,80,255:40,0 chr1 27685908 . C . PASS END=27686025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,1062:0,84,255:40,2 chr1 27686026 . C . PASS END=27686050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,117,1800:0,117,255:40,0 chr1 27686349 . T . PASS END=27686349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 27686350 . T . PASS END=27686350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:22,0 chr1 27686351 . T . PASS END=27686351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 27686352 . T . PASS END=27686352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 27686353 . A . PASS END=27686368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,799:0,65,255:26,0 chr1 27686369 . T . PASS END=27686370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 27686371 . T . PASS END=27686371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 27686372 . G . PASS END=27686372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 27686373 . G . PASS END=27686373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 27686374 . T . PASS END=27686377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 27686378 . C . PASS END=27686385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 27686386 . T . PASS END=27686386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 27686387 . A . PASS END=27686414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,870:0,62,255:26,0 chr1 27686415 . G . PASS END=27686417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27686418 . G . PASS END=27686418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 27686419 . A . PASS END=27686420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27686421 . A . PASS END=27686421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 27686422 . C . PASS END=27686432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1070:0,87,255:29,0 chr1 27686433 . C . PASS END=27686448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr1 27686449 . G . PASS END=27686449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 27686450 . G . PASS END=27686460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:21,0 chr1 27686461 . G . PASS END=27686485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 27686732 . C . PASS END=27686859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1275:0,84,255:40,0 chr1 27687196 . C . PASS END=27687197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 27687198 . G . PASS END=27687198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 27687199 . C . PASS END=27687215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:13,0 chr1 27687216 . C . PASS END=27687224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr1 27687225 . G . PASS END=27687225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 27687226 . G . PASS END=27687231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:19,0 chr1 27687232 . C . PASS END=27687235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 27687236 . C . PASS END=27687236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 27687237 . C . PASS END=27687246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 27687247 . C . PASS END=27687247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 27687248 . G . PASS END=27687248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27687249 . A . PASS END=27687249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 27687250 . T . PASS END=27687254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27687255 . G . PASS END=27687272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,688:0,44,255:19,0 chr1 27687273 . A . PASS END=27687289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 27687290 . G . PASS END=27687290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 27687291 . C . PASS END=27687297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 27687298 . C . PASS END=27687298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 27687299 . G . PASS END=27687315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 27687316 . T . PASS END=27687317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27687318 . C . PASS END=27687318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27687319 . T . PASS END=27687321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27687322 . T . PASS END=27687329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 27687412 . C . PASS END=27687416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 27687417 . A . PASS END=27687417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:26,0 chr1 27687418 . C . PASS END=27687419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27687420 . T . PASS END=27687420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr1 27687421 . C . PASS END=27687421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27687422 . T . PASS END=27687422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 27687423 . C . PASS END=27687423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27687424 . C . PASS END=27687433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 27687434 . T . PASS END=27687434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 27687435 . C . PASS END=27687466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,901:0,72,255:25,0 chr1 27687467 . T . PASS END=27687467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 27687468 . T . PASS END=27687469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 27687470 . G . PASS END=27687470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 27687471 . T . PASS END=27687482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 27687483 . G . PASS END=27687483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 27687484 . G . PASS END=27687494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 27687495 . A . PASS END=27687499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,746:0,52,255:19,0 chr1 27687648 . C . PASS END=27687648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 27687649 . A . PASS END=27687649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 27687650 . C . PASS END=27687650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 27687651 . T . PASS END=27687651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 27687652 . G . PASS END=27687652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 27687653 . G . PASS END=27687657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,914:0,62,255:26,0 chr1 27687658 . G . PASS END=27687658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 27687659 . C . PASS END=27687661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 27687662 . T . PASS END=27687667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 27687668 . G . PASS END=27687668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27687669 . G . PASS END=27687672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 27687673 . A . PASS END=27687673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 27687674 . G . PASS END=27687674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr1 27687675 . C . PASS END=27687677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 27687678 . A . PASS END=27687678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 27687679 . G . PASS END=27687680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27687681 . T . PASS END=27687681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 27687682 . G . PASS END=27687683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 27687684 . A . PASS END=27687684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27687685 . C . PASS END=27687685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 27687686 . G . PASS END=27687689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:29,0 chr1 27687690 . T . PASS END=27687690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:26,0 chr1 27687691 . G . PASS END=27687696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1202:0,83,255:28,0 chr1 27687697 . G . PASS END=27687697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr1 27687698 . G . PASS END=27687702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,80,255:26,0 chr1 27687703 . G . PASS END=27687705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1188:0,83,255:30,0 chr1 27687706 . C . PASS END=27687707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1178:0,72,255:29,0 chr1 27687708 . T . PASS END=27687712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1194:0,83,255:31,0 chr1 27687713 . G . PASS END=27687713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr1 27687714 . A . PASS END=27687714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 27687715 . A . PASS END=27687715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 27687716 . G . PASS END=27687721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:31,0 chr1 27687722 . G . PASS END=27687722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 27687723 . C . PASS END=27687743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1149:0,90,255:32,0 chr1 27687837 . C . PASS END=27687886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,118,1501:0,118,255:40,0 chr1 27688011 . C . PASS END=27688014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 27688015 . G . PASS END=27688021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 27688022 . G . PASS END=27688022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 27688023 . C . PASS END=27688028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 27688029 . C . PASS END=27688036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1024:0,71,255:26,0 chr1 27688037 . G . PASS END=27688052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 27688053 . T . PASS END=27688059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 27688060 . G . PASS END=27688072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr1 27688073 . C . PASS END=27688105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,1030:0,68,255:27,0 chr1 27688106 . C . PASS END=27688106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 27688107 . C . PASS END=27688118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr1 27688196 . C . PASS END=27688208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,923:0,72,255:25,0 chr1 27688209 . C . PASS END=27688215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:29,0 chr1 27688216 . C . PASS END=27688216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 27688217 . A . PASS END=27688220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 27688221 . G . PASS END=27688221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr1 27688222 . C . PASS END=27688264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,988:0,84,255:30,0 chr1 27688265 . G . PASS END=27688282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,67,255:25,0 chr1 27688283 . T . PASS END=27688343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:19,0 chr1 27688344 . A . PASS END=27688349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 27688350 . A . PASS END=27688350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 27688351 . C . PASS END=27688358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 27688582 . C . PASS END=27688592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr1 27688593 . A . PASS END=27688593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 27688594 . T . PASS END=27688594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27688595 . T . PASS END=27688596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27688597 . A . PASS END=27688611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,847:0,66,255:25,0 chr1 27688612 . T . PASS END=27688612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 27688613 . C . PASS END=27688613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,869:0,12,255:25,0 chr1 27688614 . T . PASS END=27688616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 27688617 . A . PASS END=27688711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1119:0,80,255:35,0 chr1 27688712 . T . PASS END=27688712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 27688713 . G . PASS END=27688713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27688714 . C . PASS END=27688727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 27688728 . G . PASS END=27688728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27688729 . C . PASS END=27688729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27688730 . C . PASS END=27688730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27688731 . C . PASS END=27688731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27688732 . A . PASS END=27688741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 27689132 . C . PASS END=27689135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr1 27689136 . T . PASS END=27689136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 27689137 . A . PASS END=27689144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,894:0,65,255:26,0 chr1 27689145 . C . PASS END=27689149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 27689150 . T . PASS END=27689150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 27689151 . G . PASS END=27689161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1049:0,84,255:29,0 chr1 27689162 . A . PASS END=27689162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,908:0,70,255:28,0 chr1 27689163 . G . PASS END=27689177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 27689178 . A . PASS END=27689178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 27689179 . A . PASS END=27689180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1048:0,60,255:29,0 chr1 27689181 . G . PASS END=27689222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1196:0,85,255:33,0 chr1 27689223 . T . PASS END=27689224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27689225 . C . PASS END=27689231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27689232 . A . PASS END=27689244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,68,255:24,0 chr1 27689342 . C . PASS END=27689342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 27689343 . A . PASS END=27689343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1218:0,75,255:34,0 chr1 27689344 . G . PASS END=27689480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1192:0,83,255:40,0 chr1 27689481 . G . PASS END=27689501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,954:0,78,255:26,0 chr1 27689502 . G . PASS END=27689512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr1 27689933 . C . PASS END=27689962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,630:0,54,255:19,0 chr1 27689963 . A . PASS END=27689979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 27689980 . C . PASS END=27690023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:19,0 chr1 27690024 . T . PASS END=27690024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 27690025 . G . PASS END=27690032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 27690033 . A . PASS END=27690033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 27690034 . G . PASS END=27690039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27690408 . C . PASS END=27690413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:18,0 chr1 27690414 . A . PASS END=27690414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 27690415 . T . PASS END=27690417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 27690418 . C . PASS END=27690426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:21,0 chr1 27690427 . A . PASS END=27690427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 27690428 . G . PASS END=27690432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,847:0,66,255:23,0 chr1 27690433 . A . PASS END=27690433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 27690434 . A . PASS END=27690445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 27690446 . T . PASS END=27690446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 27690447 . G . PASS END=27690456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr1 27690457 . A . PASS END=27690470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:19:0,57,737:0,57,255:19,0 chr1 27690471 . G . PASS END=27690523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,748:0,60,255:24,0 chr1 27690524 . A . PASS END=27690526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 27690527 . G . PASS END=27690531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 27690532 . C . PASS END=27690533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 27690534 . C . PASS END=27690535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 27690536 . C . PASS END=27690550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 27690551 . G . PASS END=27690557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 27690558 . G . PASS END=27690576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 27690695 . C . PASS END=27690698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 27690699 . A . PASS END=27690699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 27690700 . G . PASS END=27690704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 27690705 . T . PASS END=27690705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 27690706 . G . PASS END=27690715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr1 27690716 . T . PASS END=27690716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 27690717 . C . PASS END=27690718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 27690719 . A . PASS END=27690719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 27690720 . G . PASS END=27690723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 27690724 . G . PASS END=27690725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 27690726 . G . PASS END=27690738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:24,0 chr1 27690739 . C . PASS END=27690739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 27690740 . A . PASS END=27690779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,64,255:25,0 chr1 27690780 . G . PASS END=27690780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 27690781 . T . PASS END=27690794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,901:0,72,255:26,0 chr1 27690795 . C . PASS END=27690828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1024:0,80,255:32,0 chr1 27690829 . C . PASS END=27690829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 27690830 . A . PASS END=27690836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 27690837 . C . PASS END=27690837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 27690838 . A . PASS END=27690845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr1 27690846 . T . PASS END=27690846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 27690847 . C . PASS END=27690853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27690854 . T . PASS END=27690885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,978:0,68,255:26,0 chr1 27691152 . C . PASS END=27691162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 27691163 . G . PASS END=27691163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 27691164 . G . PASS END=27691170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr1 27691171 . T . PASS END=27691175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27691264 . C . PASS END=27691267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 27691268 . A . PASS END=27691268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 27691269 . G . PASS END=27691294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 27691295 . T . PASS END=27691297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27691298 . G . PASS END=27691325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:18,0 chr1 27691326 . T . PASS END=27691326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 27691327 . G . PASS END=27691377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:19,0 chr1 27691378 . G . PASS END=27691399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 27691400 . A . PASS END=27691403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 27692749 . C . PASS END=27692755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 27692756 . G . PASS END=27692796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 27692797 . T . PASS END=27692815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 27692816 . C . PASS END=27692817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 27692818 . G . PASS END=27692825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 27692826 . G . PASS END=27692826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 27692827 . G . PASS END=27692837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 27692838 . C . PASS END=27692838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,233:6,0 chr1 27692839 . G . PASS END=27692839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,192:0,4,192:5,0 chr1 27692840 . G . PASS END=27692847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 27692848 . G . PASS END=27692853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 27692854 . A . PASS END=27692855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 27692856 . G . PASS END=27692856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 27692857 . C . PASS END=27692858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 27692859 . T . PASS END=27692859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 27692860 . C . PASS END=27692860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 27692861 . G . PASS END=27692861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 27692862 . C . PASS END=27692868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 27692869 . A . LowGQ END=27692869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr1 27692870 . G . PASS END=27692871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 27692872 . G . PASS END=27692872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 27692873 . C . PASS END=27692873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 27692874 . A . PASS END=27692874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 27692875 . G . PASS END=27692890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,205:0,21,205:8,0 chr1 27692891 . C . LowGQ END=27692891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr1 27692892 . T . PASS END=27692893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 27692894 . G . PASS END=27692894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 27692895 . G . PASS END=27692898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 27692899 . C . PASS END=27692910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,217:5,0 chr1 27692911 . C . PASS END=27692911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr1 27692912 . G . PASS END=27692951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr1 27692952 . C . LowGQ END=27693088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:0:0,0,0:0,0,0:3,0 chr1 27695727 . C . PASS END=27695746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,604:0,45,255:19,0 chr1 27695747 . C . PASS END=27695755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,775:0,60,255:26,0 chr1 27695756 . A . PASS END=27695929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,1024:0,81,255:40,0 chr1 27695930 . T . PASS END=27695931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 27695932 . G . PASS END=27695936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27695937 . G . PASS END=27695949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,68,255:26,0 chr1 27695950 . T . PASS END=27695962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:17,0 chr1 27695963 . A . PASS END=27695966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 27695967 . C . PASS END=27695968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 27697087 . C . PASS END=27697088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 27697089 . G . PASS END=27697092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 27697093 . T . PASS END=27697093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 27697094 . G . PASS END=27697094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:19,0 chr1 27697095 . C . PASS END=27697096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 27697097 . C . PASS END=27697098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 27697099 . C . PASS END=27697119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,732:0,60,255:26,0 chr1 27697120 . G . PASS END=27697124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 27697125 . T . PASS END=27697125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,909:0,40,255:25,0 chr1 27697126 . A . PASS END=27697127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27697128 . T . PASS END=27697128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 27697129 . G . PASS END=27697130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 27697131 . T . PASS END=27697132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 27697133 . T . PASS END=27697155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1083:0,83,255:32,0 chr1 27697156 . T . PASS END=27697156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr1 27697157 . C . PASS END=27697218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1092:0,82,255:34,0 chr1 27697219 . T . PASS END=27697219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 27697220 . A . PASS END=27697221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 27697334 . C . PASS END=27697436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:34:0,91,1084:0,91,255:40,0 chr1 27697437 . A . PASS END=27697442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:33:0,93,1395:0,99,255:32,0 chr1 27697443 . A . PASS END=27697443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:29,0 chr1 27697444 . T . PASS END=27697444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1008:0,27,255:28,0 chr1 27697445 . C . PASS END=27697446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr1 27697447 . T . PASS END=27697447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:30,0 chr1 27697448 . G . PASS END=27697451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 27697452 . C . PASS END=27697452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 27697453 . C . PASS END=27697453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27697454 . T . PASS END=27697454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:26,0 chr1 27697455 . C . PASS END=27697460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27697461 . C . PASS END=27697463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,926:0,70,255:26,0 chr1 27699627 . C . PASS END=27699639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,653:0,51,255:19,0 chr1 27699640 . C . PASS END=27699724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:25,0 chr1 27699725 . G . PASS END=27699735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 27699736 . T . PASS END=27699736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:18,0 chr1 27699737 . C . PASS END=27699754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,714:0,44,255:19,0 chr1 27699979 . C . PASS END=27700011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1291:0,97,255:37,0 chr1 27700455 . C . PASS END=27700479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,847:0,69,255:25,0 chr1 27700480 . T . PASS END=27700482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 27700483 . C . PASS END=27700483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 27700484 . T . PASS END=27700497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:18,0 chr1 27700498 . G . PASS END=27700498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 27700499 . C . PASS END=27700500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27700847 . C . PASS END=27700848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 27700849 . T . PASS END=27700849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 27700850 . G . PASS END=27700853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 27700854 . A . PASS END=27700854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 27700855 . C . PASS END=27700856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 27700857 . T . PASS END=27700857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 27700858 . G . PASS END=27700866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1094:0,87,255:31,0 chr1 27700867 . T . PASS END=27700867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 27700868 . T . PASS END=27700878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1066:0,82,255:35,0 chr1 27700879 . C . PASS END=27700879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 27700880 . T . PASS END=27700942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1168:0,88,255:36,0 chr1 27701219 . C . PASS END=27701308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:36:0,80,1302:0,80,255:40,0 chr1 27701309 . T . PASS END=27701309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1177:0,72,255:34,0 chr1 27705798 . T . PASS END=27705801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,986:0,78,255:26,0 chr1 27705993 . T . PASS END=27705995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 27705996 . G . PASS END=27705999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 27706537 . T . PASS END=27706537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 27706538 . C . PASS END=27706538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 27706539 . A . PASS END=27706543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 27706544 . G . PASS END=27706683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1260:0,87,255:40,0 chr1 27706684 . C . PASS END=27706685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 27708270 . C . PASS END=27708314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1164:0,83,255:37,0 chr1 27708818 . C . PASS END=27708889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1305:0,95,255:40,0 chr1 27708990 . C . PASS END=27708997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 27708998 . T . PASS END=27709019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:8:0,24,288:0,24,255:9,0 chr1 27709021 . G . PASS END=27709024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 27709025 . C . PASS END=27709043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,419:0,33,255:12,0 chr1 27709045 . G . PASS END=27709049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 27709050 . C . PASS END=27709056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27709057 . G . PASS END=27709057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 27709058 . C . PASS END=27709059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 27709060 . G . PASS END=27709146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 27709147 . A . PASS END=27709147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 27709148 . G . PASS END=27709150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27709151 . C . PASS END=27709153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 27709154 . T . PASS END=27709157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:12,0 chr1 27709642 . C . PASS END=27709660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr1 27709661 . A . PASS END=27709661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:18,0 chr1 27709662 . C . PASS END=27709668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,631:0,43,255:19,0 chr1 27709669 . G . PASS END=27709677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 27709678 . A . PASS END=27709678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 27709679 . A . PASS END=27709682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 27709683 . C . PASS END=27709696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 27709697 . A . PASS END=27709697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,594:0,24,255:16,0 chr1 27709698 . G . PASS END=27709703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:18,0 chr1 27709704 . A . PASS END=27709704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 27709705 . A . PASS END=27709706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,666:0,54,255:18,0 chr1 27709707 . G . PASS END=27709707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 27709708 . C . PASS END=27709729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 27720303 . A . PASS END=27720303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 27720304 . T . PASS END=27720306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 27720307 . T . PASS END=27720310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27720311 . G . PASS END=27720313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27720314 . T . PASS END=27720317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27720318 . G . PASS END=27720323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 27720324 . C . PASS END=27720343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,724:0,63,255:22,0 chr1 27720344 . T . PASS END=27720344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 27720345 . G . PASS END=27720366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr1 27720367 . G . PASS END=27720434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,629:0,44,255:19,0 chr1 27720435 . G . PASS END=27720435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27720436 . T . PASS END=27720478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,554:0,40,255:19,0 chr1 27720479 . G . PASS END=27720479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:16,0 chr1 27720480 . C . PASS END=27720492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,674:0,54,255:18,0 chr1 27720493 . T . PASS END=27720493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 27720494 . C . PASS END=27720499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 27720500 . G . PASS END=27720502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 27720503 . C . PASS END=27720515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,720:0,44,255:18,0 chr1 27720516 . C . PASS END=27720516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 27720517 . G . PASS END=27720518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 27720519 . G . PASS END=27720521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 27720522 . C . PASS END=27720541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 27720542 . C . PASS END=27720550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 27720551 . C . PASS END=27720551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 27720552 . G . PASS END=27720552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27720553 . T . PASS END=27720553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 27720554 . G . PASS END=27720556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 27720557 . A . PASS END=27720557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 27720558 . G . PASS END=27720558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 27720559 . A . PASS END=27720559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 27720560 . C . PASS END=27720560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr1 27720561 . C . PASS END=27720561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:14,0 chr1 27720562 . T . PASS END=27720562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 27720563 . G . PASS END=27720563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 27720564 . C . PASS END=27720564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 27720565 . T . PASS END=27720565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,496:0,1,255:14,0 chr1 27720566 . G . PASS END=27720568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 27720569 . A . PASS END=27720569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 27720570 . G . PASS END=27720571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 27720572 . C . PASS END=27720572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 27720573 . C . PASS END=27720586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 27720587 . G . PASS END=27720587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 27720588 . C . PASS END=27720591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 27720592 . T . PASS END=27720592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr1 27720593 . T . PASS END=27720600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 27720601 . T . PASS END=27720601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr1 27720602 . C . PASS END=27720604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27720605 . C . PASS END=27720605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 27720606 . T . PASS END=27720606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27720607 . G . PASS END=27720607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 27720608 . C . PASS END=27720613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 27720614 . C . PASS END=27720614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 27720615 . T . PASS END=27720622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 27720623 . G . PASS END=27720623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 27720624 . A . PASS END=27720635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 27720636 . C . PASS END=27720636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 27720637 . T . PASS END=27720641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 27720642 . G . PASS END=27720642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 27720643 . G . PASS END=27720651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,673:0,41,255:18,0 chr1 27720652 . C . PASS END=27720652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 27720653 . A . PASS END=27720662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 27720663 . A . PASS END=27720663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27720664 . C . PASS END=27720664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 27720665 . C . PASS END=27720665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27720666 . G . PASS END=27720666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 27720667 . C . PASS END=27720668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27720669 . A . PASS END=27720669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 27720670 . G . PASS END=27720672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27720673 . T . PASS END=27720675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27720676 . G . PASS END=27720676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:17,0 chr1 27720677 . C . PASS END=27720705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,668:0,41,255:19,0 chr1 27720706 . A . PASS END=27720729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:22,0 chr1 27720730 . C . PASS END=27720730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 27720731 . C . PASS END=27720747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,795:0,69,255:23,0 chr1 27720748 . C . PASS END=27720748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 27720749 . A . PASS END=27720766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 27720767 . G . PASS END=27720767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 27720768 . A . PASS END=27720777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 27720778 . T . PASS END=27720778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 27720779 . A . PASS END=27720786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1022:0,68,255:26,0 chr1 27720787 . G . PASS END=27720790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 27720791 . T . PASS END=27720791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 27720792 . G . PASS END=27720818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:31,0 chr1 27720819 . C . PASS END=27720819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 27720820 . T . PASS END=27720831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 27720832 . G . PASS END=27720837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 27720838 . A . PASS END=27720839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27720840 . G . PASS END=27720841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 27720842 . C . PASS END=27720842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 27720843 . C . PASS END=27720845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27720846 . A . PASS END=27720846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27720847 . C . PASS END=27720847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27720848 . C . PASS END=27720849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 27720850 . C . PASS END=27720850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27720851 . A . PASS END=27720858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 27720859 . T . PASS END=27720864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 27720865 . A . PASS END=27720865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 27720866 . T . PASS END=27720878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 27720879 . A . PASS END=27720879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,914:0,76,255:29,0 chr1 27720880 . A . PASS END=27720978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1057:0,80,255:32,0 chr1 27720979 . A . PASS END=27720979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 27720980 . G . PASS END=27720980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27720981 . A . PASS END=27720981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 27720982 . T . PASS END=27720982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27720983 . T . PASS END=27720983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 27720984 . G . PASS END=27721055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1156:0,84,255:37,0 chr1 27721056 . G . PASS END=27721056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:31,0 chr1 27721057 . T . PASS END=27721071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:85:37:0,85,1398:0,85,255:36,0 chr1 27721072 . C . PASS END=27721072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 27721073 . C . PASS END=27721295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:36:0,85,1305:0,85,255:40,0 chr1 27734683 . T . PASS END=27734696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,906:0,62,255:27,0 chr1 27734697 . C . PASS END=27734707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:29,0 chr1 27734708 . A . PASS END=27734708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 27734709 . A . PASS END=27734710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27734711 . T . PASS END=27734711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 27734712 . C . PASS END=27734719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 27734720 . T . PASS END=27734720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr1 27734721 . C . PASS END=27734721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 27734722 . A . PASS END=27734723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:30:0,63,1086:0,63,255:30,0 chr1 27734724 . C . PASS END=27734818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1197:0,83,255:40,0 chr1 27734819 . T . PASS END=27734840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:26,0 chr1 27736186 . C . PASS END=27736193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27736194 . A . PASS END=27736194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 27736195 . T . PASS END=27736211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 27736212 . C . PASS END=27736216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 27736217 . G . PASS END=27736217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27736218 . G . PASS END=27736219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27736220 . A . PASS END=27736220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 27736221 . T . PASS END=27736222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27736223 . G . PASS END=27736231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:25,0 chr1 27736232 . A . PASS END=27736232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:22,0 chr1 27736233 . G . PASS END=27736236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 27736237 . A . PASS END=27736238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 27736239 . G . PASS END=27736241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 27736242 . G . PASS END=27736242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr1 27736243 . A . PASS END=27736262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 27736263 . G . PASS END=27736263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 27736264 . A . PASS END=27736273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 27736274 . T . PASS END=27736274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 27736275 . G . PASS END=27736282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,898:0,62,255:21,0 chr1 27736283 . A . PASS END=27736283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 27736284 . G . PASS END=27736285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:21,0 chr1 27736286 . C . PASS END=27736286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 27736287 . T . PASS END=27736288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 27736289 . G . PASS END=27736292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 27736293 . T . PASS END=27736293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:18,0 chr1 27736294 . C . PASS END=27736301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 27736302 . G . PASS END=27736303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27736304 . G . PASS END=27736304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr1 27736305 . A . PASS END=27736305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27736306 . A . PASS END=27736307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,723:0,52,255:19,0 chr1 27736308 . G . PASS END=27736308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27736309 . G . PASS END=27736309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 27736310 . G . PASS END=27736310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 27736311 . G . PASS END=27736311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 27736312 . G . PASS END=27736312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27736313 . A . PASS END=27736313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:19,0 chr1 27736314 . G . PASS END=27736322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27736323 . C . PASS END=27736323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 27736324 . C . PASS END=27736324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 27736325 . C . PASS END=27736329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,713:0,47,255:19,0 chr1 27736330 . G . PASS END=27736333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 27736334 . A . PASS END=27736334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 27736335 . G . PASS END=27736343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,71,255:22,0 chr1 27736344 . G . PASS END=27736344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 27736345 . G . PASS END=27736345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 27736346 . A . PASS END=27736346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 27736347 . G . PASS END=27736349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 27736350 . G . PASS END=27736350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 27736351 . G . PASS END=27736357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 27736358 . T . PASS END=27736358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 27736359 . C . PASS END=27736373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:26,0 chr1 27736374 . G . PASS END=27736374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27736375 . A . PASS END=27736393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:25:0,67,970:0,67,255:26,0 chr1 27736394 . A . PASS END=27736394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,791:0,23,255:23,0 chr1 27736395 . G . PASS END=27736395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:25,0 chr1 27736396 . T . PASS END=27736397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27736398 . G . PASS END=27736399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 27736400 . G . PASS END=27736401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27736402 . A . PASS END=27736402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,970:0,43,255:26,0 chr1 27736403 . G . PASS END=27736405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 27736406 . A . PASS END=27736406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,956:0,60,255:28,0 chr1 27736407 . G . PASS END=27736410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:30,0 chr1 27736411 . C . PASS END=27736411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 27736412 . T . PASS END=27736426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1141:0,93,255:31,0 chr1 27736427 . A . PASS END=27736427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:28,0 chr1 27736428 . G . PASS END=27736436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1257:0,89,255:32,0 chr1 27736437 . G . PASS END=27736437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 27736438 . C . PASS END=27736441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 27736442 . A . PASS END=27736442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:28,0 chr1 27736443 . A . PASS END=27736447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 27736448 . A . PASS END=27736448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:27,0 chr1 27736449 . G . PASS END=27736453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:31,0 chr1 27736454 . A . PASS END=27736454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1080:0,65,255:30,0 chr1 27736455 . G . PASS END=27736460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr1 27736461 . A . PASS END=27736461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 27736462 . A . PASS END=27736465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,83,255:29,0 chr1 27736466 . T . PASS END=27736476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,89,255:26,0 chr1 27736477 . G . PASS END=27736477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 27736478 . T . PASS END=27736478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 27736479 . G . PASS END=27736480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 27736481 . T . PASS END=27736482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 27736483 . G . PASS END=27736483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 27736484 . A . PASS END=27736484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 27736485 . G . PASS END=27736491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1070:0,87,255:30,0 chr1 27736492 . C . PASS END=27736492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 27736493 . T . PASS END=27736500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 27736501 . C . PASS END=27736501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 27736502 . A . PASS END=27736504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1087:0,93,255:31,0 chr1 27736505 . T . PASS END=27736505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr1 27736506 . C . PASS END=27736531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1088:0,80,255:31,0 chr1 27736532 . G . PASS END=27736532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 27736533 . C . PASS END=27736534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1004:0,90,255:30,0 chr1 27736535 . T . PASS END=27736535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:27,0 chr1 27736536 . A . PASS END=27736537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27736538 . C . PASS END=27736540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,992:0,60,255:28,0 chr1 27736541 . T . PASS END=27736546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 27736547 . C . PASS END=27736547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 27736548 . G . PASS END=27736557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1194:0,86,255:35,0 chr1 27736558 . G . PASS END=27736559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:34,0 chr1 27736560 . G . PASS END=27736560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:33,0 chr1 27736561 . G . PASS END=27736606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1297:0,94,255:37,0 chr1 27736607 . T . PASS END=27736607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:31,0 chr1 27736608 . A . PASS END=27736627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1205:0,86,255:33,0 chr1 27736628 . A . PASS END=27736650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 27736651 . A . PASS END=27736652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27736653 . C . PASS END=27736660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27736661 . T . PASS END=27736682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,50,255:19,0 chr1 27736683 . T . PASS END=27736688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:12,0 chr1 27736689 . T . PASS END=27736689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 27736690 . C . PASS END=27736700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 27739066 . C . PASS END=27739212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1172:0,83,255:40,0 chr1 27739213 . G . PASS END=27739221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:25,0 chr1 27741327 . C . PASS END=27741457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,3:77:99:46:0,120,1800:0,124,255:40,0 chr1 27742479 . C . PASS END=27742596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:42:0,101,1560:0,101,255:40,0 chr1 27744770 . C . PASS END=27744923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:97:38:0,97,1252:0,97,255:40,0 chr1 27745455 . C . PASS END=27745503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:19,0 chr1 27745504 . G . PASS END=27745508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 27745509 . T . PASS END=27745509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 27745510 . C . PASS END=27745531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 27745532 . G . PASS END=27745577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr1 27745578 . C . PASS END=27745587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 27745588 . A . PASS END=27745588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 27745589 . C . PASS END=27745589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27755271 . T . PASS END=27755293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1333:0,99,255:35,0 chr1 27755294 . A . PASS END=27755294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1225:0,61,255:34,0 chr1 27755295 . C . PASS END=27755372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1208:0,83,255:36,0 chr1 27755373 . G . PASS END=27755400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:24,0 chr1 27873815 . C . PASS END=27873816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 27873817 . A . PASS END=27873817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 27873818 . C . PASS END=27873818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 27873819 . A . PASS END=27873819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 27873820 . G . PASS END=27873824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:19,0 chr1 27873825 . G . PASS END=27873830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 27873831 . G . PASS END=27873845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,629:0,43,255:19,0 chr1 27873846 . G . PASS END=27873863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27873864 . G . PASS END=27873867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,682:0,46,255:19,0 chr1 27873868 . C . PASS END=27873874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 27873875 . G . PASS END=27873878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,798:0,50,255:19,0 chr1 27873879 . C . PASS END=27873897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 27873898 . G . PASS END=27873902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,776:0,55,255:19,0 chr1 27873903 . G . PASS END=27873931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,853:0,62,255:24,0 chr1 27873932 . C . PASS END=27873935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr1 27873936 . T . PASS END=27873936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 27873937 . A . PASS END=27873937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27873938 . G . PASS END=27873939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 27873940 . C . PASS END=27873940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27873941 . G . PASS END=27873965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 27873966 . T . PASS END=27873966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,914:0,37,255:24,0 chr1 27873967 . C . PASS END=27873968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 27873969 . C . PASS END=27873969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 27873970 . T . PASS END=27873972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 27873973 . G . PASS END=27873974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 27873975 . A . PASS END=27873975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 27873976 . C . PASS END=27873977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27873978 . G . PASS END=27873985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 27873986 . G . PASS END=27873986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 27873987 . G . PASS END=27873987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 27873988 . T . PASS END=27873989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:28,0 chr1 27873990 . A . PASS END=27873990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:27,0 chr1 27873991 . A . PASS END=27873991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27873992 . G . PASS END=27873995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 27873996 . C . PASS END=27873998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27873999 . A . PASS END=27873999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:26,0 chr1 27874000 . G . PASS END=27874000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27874001 . G . PASS END=27874003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 27874004 . T . PASS END=27874004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 27874005 . G . PASS END=27874005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:26,0 chr1 27874006 . G . PASS END=27874027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:24:0,67,870:0,67,255:26,0 chr1 27874028 . T . PASS END=27874028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 27874029 . G . PASS END=27874033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,892:0,72,255:24,0 chr1 27874034 . A . PASS END=27874035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,839:0,41,255:22,0 chr1 27874036 . G . PASS END=27874041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 27874042 . G . PASS END=27874042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:20,0 chr1 27874043 . G . PASS END=27874044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,870:0,61,255:22,0 chr1 27874045 . G . PASS END=27874045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 27874046 . T . PASS END=27874048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 27874049 . G . PASS END=27874049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 27874050 . C . PASS END=27874059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 27874060 . G . PASS END=27874060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 27874061 . G . PASS END=27874061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr1 27874062 . G . PASS END=27874062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 27874063 . C . PASS END=27874063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 27874064 . C . PASS END=27874066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 27874067 . T . PASS END=27874067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 27874068 . T . PASS END=27874077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,914:0,62,255:25,0 chr1 27874078 . C . PASS END=27874078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr1 27874079 . C . PASS END=27874095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,64,255:25,0 chr1 27874096 . T . PASS END=27874125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:19,0 chr1 27874126 . T . PASS END=27874126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 27874127 . G . PASS END=27874133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:15,0 chr1 27874134 . G . PASS END=27874136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 27874137 . G . PASS END=27874145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 27874146 . C . PASS END=27874182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 27874183 . T . PASS END=27874183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 27874184 . G . PASS END=27874189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 27874190 . A . PASS END=27874190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 27874191 . T . PASS END=27874206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 27874207 . C . PASS END=27874207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 27874208 . A . PASS END=27874225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,488:0,39,255:13,0 chr1 27874226 . C . PASS END=27874245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 27874246 . A . PASS END=27874246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 27874247 . G . PASS END=27874250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 27874251 . G . PASS END=27874253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27874254 . G . PASS END=27874254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27874255 . A . PASS END=27874255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:14,0 chr1 27874256 . A . PASS END=27874300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,560:0,41,255:19,0 chr1 27874301 . G . PASS END=27874303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 27874304 . C . PASS END=27874304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 27874305 . T . PASS END=27874307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 27874308 . G . PASS END=27874308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 27874309 . C . PASS END=27874310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 27874311 . G . PASS END=27874311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 27874312 . C . PASS END=27874327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27874328 . G . PASS END=27874335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 27874336 . C . PASS END=27874342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 27874343 . T . PASS END=27874343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 27874344 . C . PASS END=27874345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27874346 . A . PASS END=27874346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 27874347 . T . PASS END=27874358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:24,0 chr1 27874359 . T . PASS END=27874359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 27874360 . C . PASS END=27874385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,894:0,62,255:25,0 chr1 27874386 . G . PASS END=27874390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 27874391 . C . PASS END=27874392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27874393 . G . PASS END=27874400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 27874401 . T . PASS END=27874408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 27874409 . C . PASS END=27874410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 27874411 . G . PASS END=27874472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:24,0 chr1 27874473 . T . PASS END=27874479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 27874480 . G . PASS END=27874480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:18,0 chr1 27874481 . C . PASS END=27874482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 27874483 . G . PASS END=27874484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr1 27874485 . G . PASS END=27874486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27874487 . G . PASS END=27874495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27874496 . G . PASS END=27874496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 27874497 . C . PASS END=27874499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27874500 . T . PASS END=27874500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 27874501 . C . PASS END=27874501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27874502 . A . PASS END=27874502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 27874503 . A . PASS END=27874503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27874504 . G . PASS END=27874514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 27874515 . C . PASS END=27874527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27874528 . A . PASS END=27874529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27874530 . T . PASS END=27874530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 27874531 . C . PASS END=27874536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27874537 . G . PASS END=27874555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:22,0 chr1 27874556 . G . PASS END=27874556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 27874557 . C . PASS END=27874561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 27874562 . G . PASS END=27874562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 27874563 . G . PASS END=27874563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 27874564 . A . PASS END=27874565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 27874566 . G . PASS END=27874567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27874568 . C . PASS END=27874568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 27874569 . G . PASS END=27874569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27874570 . T . PASS END=27874570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 27874571 . G . PASS END=27874572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27874573 . A . PASS END=27874573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 27874574 . C . PASS END=27874576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 27874577 . G . PASS END=27874577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 27874578 . T . PASS END=27874578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,682:0,36,255:21,0 chr1 27874579 . T . PASS END=27874579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 27874580 . C . PASS END=27874580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 27874581 . A . PASS END=27874581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,704:0,19,255:18,0 chr1 27874582 . T . PASS END=27874582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:20,0 chr1 27874583 . G . PASS END=27874583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 27874584 . G . PASS END=27874585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:23,0 chr1 27874586 . G . PASS END=27874586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:23,0 chr1 27874587 . T . PASS END=27874587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 27874588 . A . PASS END=27874594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 27874595 . T . PASS END=27874595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 27874596 . A . PASS END=27874599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 27874600 . A . PASS END=27874600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 27874601 . G . PASS END=27874643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,848:0,61,255:26,0 chr1 27874644 . G . PASS END=27874649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 27874650 . A . PASS END=27874650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr1 27874651 . G . PASS END=27874655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27874656 . G . PASS END=27874656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 27874657 . A . PASS END=27874662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27874663 . T . PASS END=27874663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr1 27874664 . G . PASS END=27874668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27874669 . C . PASS END=27874676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 27874677 . T . PASS END=27874677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27874678 . A . PASS END=27874678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:27,0 chr1 27874679 . G . PASS END=27874679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 27874680 . T . PASS END=27874690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 27874691 . G . PASS END=27874692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 27874693 . G . PASS END=27874694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:31,0 chr1 27874695 . T . PASS END=27874695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:29,0 chr1 27874696 . C . PASS END=27874698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 27874699 . G . PASS END=27874699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr1 27874700 . A . PASS END=27874711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1172:0,83,255:33,0 chr1 27874712 . C . PASS END=27874712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:32,0 chr1 27874713 . A . PASS END=27874714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:33,0 chr1 27874715 . T . PASS END=27874715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:33,0 chr1 27874716 . G . PASS END=27874735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:34,0 chr1 27874736 . G . PASS END=27874736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 27874737 . G . PASS END=27874757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr1 27874758 . G . PASS END=27874758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27874759 . C . PASS END=27874762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27874763 . G . PASS END=27874765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 27874766 . A . PASS END=27874779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 27874780 . T . PASS END=27874828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 27874829 . A . PASS END=27874843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,593:0,46,255:19,0 chr1 27874844 . T . PASS END=27874844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 27874845 . G . PASS END=27874850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 27874851 . C . PASS END=27874851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:15,0 chr1 27874852 . C . PASS END=27874915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,543:0,44,255:19,0 chr1 27874916 . C . PASS END=27874927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 27874928 . A . PASS END=27874928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 27874929 . C . PASS END=27874932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27874933 . C . PASS END=27874934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27874935 . G . PASS END=27874938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 27874939 . T . PASS END=27874940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27874941 . G . PASS END=27874943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 27874944 . C . PASS END=27874946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 27874947 . C . PASS END=27874982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 27874983 . G . PASS END=27874983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 27874984 . G . PASS END=27874999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,872:0,69,255:26,0 chr1 27875000 . G . PASS END=27875020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr1 27875021 . C . PASS END=27875021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 27875022 . T . PASS END=27875022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27875023 . C . PASS END=27875029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 27875030 . G . PASS END=27875035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 27875036 . G . PASS END=27875038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27875039 . C . PASS END=27875039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27875040 . G . PASS END=27875046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27875047 . C . PASS END=27875049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27875050 . C . PASS END=27875051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 27875052 . C . PASS END=27875053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 27875054 . A . PASS END=27875054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 27875055 . C . PASS END=27875056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 27875057 . T . PASS END=27875074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:73:26:0,73,1017:0,73,255:27,0 chr1 27875075 . A . PASS END=27875075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr1 27875076 . C . PASS END=27875079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:25,0 chr1 27875080 . G . PASS END=27875080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 27875081 . A . PASS END=27875093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 27875094 . C . PASS END=27875095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27875096 . A . PASS END=27875097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,922:0,67,255:26,0 chr1 27875098 . C . PASS END=27875098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 27875099 . C . PASS END=27875099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 27875100 . G . PASS END=27875100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27875101 . G . PASS END=27875101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 27875102 . C . PASS END=27875110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 27875111 . C . PASS END=27875112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 27875113 . G . PASS END=27875115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27875116 . T . PASS END=27875116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27875117 . G . PASS END=27875117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:25,0 chr1 27875118 . C . PASS END=27875119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 27875120 . G . PASS END=27875122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 27875123 . G . PASS END=27875125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 27875126 . G . PASS END=27875126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27875127 . G . PASS END=27875127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 27875128 . A . PASS END=27875133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 27875134 . C . PASS END=27875134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 27875135 . A . PASS END=27875139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27875140 . A . PASS END=27875141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 27875142 . G . PASS END=27875158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 27875159 . C . PASS END=27875159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 27875160 . T . PASS END=27875162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 27875163 . T . PASS END=27875163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 27875164 . G . PASS END=27875169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 27875170 . C . PASS END=27875170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:26,0 chr1 27875171 . C . PASS END=27875177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 27875178 . G . PASS END=27875180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1015:0,71,255:24,0 chr1 27875181 . G . PASS END=27875186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:28,0 chr1 27875187 . T . PASS END=27875187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,867:0,59,255:26,0 chr1 27875188 . T . PASS END=27875188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 27875189 . G . PASS END=27875189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:27,0 chr1 27875190 . G . PASS END=27875190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 27875191 . A . PASS END=27875191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:25,0 chr1 27875192 . G . PASS END=27875192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27875193 . A . PASS END=27875194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr1 27875195 . G . PASS END=27875208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr1 27875209 . T . PASS END=27875209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 27875210 . G . PASS END=27875213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27875214 . T . PASS END=27875225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,961:0,65,255:26,0 chr1 27875226 . C . PASS END=27875226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr1 27875227 . A . PASS END=27875239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,984:0,65,255:24,0 chr1 27875240 . A . PASS END=27875240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 27875241 . T . PASS END=27875244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 27875245 . A . PASS END=27875245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 27875246 . G . PASS END=27875248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 27875249 . C . PASS END=27875249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr1 27875250 . T . PASS END=27875251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 27875252 . A . PASS END=27875282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,56,255:19,0 chr1 27875283 . C . PASS END=27875309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,784:0,66,255:22,0 chr1 27875310 . G . PASS END=27875310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 27875311 . A . PASS END=27875312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27875313 . G . PASS END=27875351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,720:0,44,255:19,0 chr1 27875352 . A . PASS END=27875352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,2 chr1 27875353 . A . LowGQ END=27875355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:21:0,0,623:0,0,255:21,2 chr1 27875356 . A . PASS END=27875356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr1 27875357 . G . PASS END=27875394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,869:0,66,255:23,0 chr1 27875395 . C . PASS END=27875396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 27875397 . G . PASS END=27875401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27875402 . T . PASS END=27875402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 27875403 . G . PASS END=27875410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 27875411 . C . PASS END=27875427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,50,255:19,0 chr1 27875428 . C . PASS END=27875433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,34,255:13,0 chr1 27875434 . G . PASS END=27875434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 27875435 . C . PASS END=27875438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 27875439 . A . PASS END=27875461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:8:0,21,315:0,23,255:9,0 chr1 27875462 . G . PASS END=27875470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 27875471 . C . PASS END=27875474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 27875475 . G . PASS END=27875476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:9:9:0,9,135:0,27,255:3,0 chr1 27875477 . G . PASS END=27875482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,30,255:4,0 chr1 27875483 . A . PASS END=27875499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:6:7:0,6,90:0,7,227:3,0 chr1 27875500 . C . PASS END=27875502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:11:0,12,180:0,33,255:4,0 chr1 27875503 . C . PASS END=27875504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:9:11:0,9,135:0,33,255:3,0 chr1 27875505 . G . PASS END=27875514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:10:13:0,10,180:0,10,255:5,1 chr1 27875515 . A . LowGQ END=27875515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,422:6,0,255:5,1 chr1 27875516 . G . PASS END=27875516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:15:14:0,15,225:0,42,255:5,0 chr1 27875517 . AAGG A, 50.00 PASS DP=14;MQ=250.00;MQRankSum=2.933;ReadPosRankSum=1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,9,0:0.643,0.000:14:3,6,0:2,3,0:47:79,0,47,378,310,688:254,0,136:5,10:5.0000e+01,8.2318e-05,5.0484e+01,3.8368e+02,3.4479e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:2,3,6,3:2,3,5,4 chr1 27875518 . A . LowGQ END=27875521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,10:15:0:14:0,0,0:255,0,149:12,10 chr1 27875522 . G . PASS END=27875533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 27875534 . T . PASS END=27875536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 27875537 . C . PASS END=27875537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 27875538 . A . PASS END=27875547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 27875548 . C . PASS END=27875551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 27875552 . G . PASS END=27875552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 27875553 . G . PASS END=27875557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 27875558 . C . PASS END=27875567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27875568 . T . PASS END=27875574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 27875575 . C . PASS END=27875575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 27875576 . G . PASS END=27875580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 27875581 . G . PASS END=27875583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 27875584 . C . PASS END=27875585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27875586 . C . PASS END=27875650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,580:0,45,255:19,0 chr1 27875651 . G . PASS END=27875653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 27875654 . G . PASS END=27875687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 27875688 . A . PASS END=27875705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr1 27875706 . T . PASS END=27875706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 27875707 . A . PASS END=27875708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 27875709 . C . PASS END=27875742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,535:0,42,255:19,0 chr1 27875743 . G . PASS END=27875744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 27875745 . T . PASS END=27875762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:17:0,44,675:0,44,255:18,0 chr1 27875763 . G . PASS END=27875763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:17,0 chr1 27875764 . C . PASS END=27875786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 27875787 . A . PASS END=27875823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:19,0 chr1 27875824 . C T, 100.71 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,10,0:0,8,0:51:138,54,0,653,54,653:255,54,0:0,0:1.0071e+02,5.0709e+01,3.6758e-05,4.5000e+02,8.5479e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,10:0,0,8,10 chr1 27875825 . G . PASS END=27875829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 27875830 . G . PASS END=27875830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 27875831 . A . PASS END=27875831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 27875832 . G . PASS END=27875843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:23,0 chr1 27875844 . C . PASS END=27875844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 27875845 . T . PASS END=27875861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,869:0,69,255:24,0 chr1 27875862 . G . PASS END=27875881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 27875882 . C . PASS END=27875890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 27875891 . C . PASS END=27875899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 27875900 . G . PASS END=27875954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,675:0,41,255:19,0 chr1 27875955 . C . PASS END=27875955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 27875956 . G . PASS END=27875960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,625:0,57,255:19,0 chr1 27875961 . G . PASS END=27875966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 27875967 . G . PASS END=27875993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 27875994 . G . PASS END=27875994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 27875995 . C . PASS END=27876004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,675:0,44,255:18,0 chr1 27876005 . T . PASS END=27876005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 27876006 . G . PASS END=27876009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,698:0,54,255:19,0 chr1 27876010 . C . PASS END=27876013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 27876014 . A . PASS END=27876014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 27876015 . T . PASS END=27876015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 27876016 . A . PASS END=27876016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 27876017 . G . PASS END=27876038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,847:0,62,255:24,0 chr1 27876039 . T . PASS END=27876039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 27876040 . C . PASS END=27876040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 27876041 . T . PASS END=27876041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 27876042 . G . PASS END=27876049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,787:0,69,255:23,0 chr1 27876050 . G . PASS END=27876050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 27876051 . G . PASS END=27876103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,693:0,60,255:24,0 chr1 27876104 . G . PASS END=27876114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27876115 . C . PASS END=27876122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 27876123 . A . PASS END=27876123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 27876124 . G . PASS END=27876127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 27876128 . T . PASS END=27876151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 27876152 . C . PASS END=27876154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 27876155 . G . PASS END=27876159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr1 27876160 . A . PASS END=27876160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 27876161 . G . PASS END=27876166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 27876167 . A . PASS END=27876167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27876168 . C . PASS END=27876168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27876169 . C . PASS END=27876184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:12,0 chr1 27876185 . G . PASS END=27876185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 27876186 . C . PASS END=27876187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 27876188 . A . PASS END=27876202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 27876203 . A . PASS END=27876205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 27876206 . C . PASS END=27876220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 27876221 . G . PASS END=27876242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,307:0,33,255:13,0 chr1 27876243 . C . PASS END=27876243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 27876244 . C . PASS END=27876251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27876252 . C . PASS END=27876311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:17,0 chr1 27876312 . T . PASS END=27876312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 27876313 . T . PASS END=27876334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 27876335 . T . PASS END=27876336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 27876337 . C . PASS END=27876344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 27876345 . A . PASS END=27876345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 27876346 . A . PASS END=27876347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27876348 . C . PASS END=27876356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,535:0,31,255:12,0 chr1 27876357 . C . PASS END=27876357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27876358 . T . PASS END=27876366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,540:0,32,255:13,0 chr1 27876367 . G . PASS END=27876367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 27876368 . C . PASS END=27876381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 27876382 . T . PASS END=27876382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 27876383 . C . PASS END=27876392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,441:0,36,255:12,0 chr1 27876393 . C . PASS END=27876401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 27876402 . C . PASS END=27876404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 27876405 . T . PASS END=27876407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 27876408 . C . LowGQ END=27876408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:7,0 chr1 27876409 . G . PASS END=27876415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 27876416 . C . PASS END=27876444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 27876445 . G . PASS END=27876451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr1 27876452 . T . PASS END=27876452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,274:0,16,255:10,0 chr1 27876453 . T . PASS END=27876463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr1 27876464 . C . PASS END=27876464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 27876465 . C . PASS END=27876474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 27876475 . T . PASS END=27876475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:12,0 chr1 27876476 . A . PASS END=27876481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 27876482 . C A, 49.95 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=1.369;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,6,0:0.462,0.000:13:4,4,0:3,2,0:47:85,0,47,185,185,185:194,0,210:6,0:4.9952e+01,8.7237e-05,5.0000e+01,1.8472e+02,2.1949e+02,1.8773e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,3,3,3:3,4,5,1 chr1 27876483 . G . PASS END=27876500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 27876501 . G . PASS END=27876519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,327:0,27,255:9,0 chr1 27876520 . T . PASS END=27876526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 27876527 . C . PASS END=27876527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 27876528 . T . PASS END=27876550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 27876551 . A . PASS END=27876551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr1 27876552 . C . PASS END=27876555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 27876556 . A . PASS END=27876560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 27876561 . C . PASS END=27876579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:8,0 chr1 27876580 . C . PASS END=27876580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 27876581 . A . PASS END=27876582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 27876583 . G . PASS END=27876586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 27876587 . C . PASS END=27876587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 27876588 . C . PASS END=27876597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,188:0,18,188:6,0 chr1 27876598 . C . PASS END=27876598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 27876599 . A . PASS END=27876616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,205:6,0 chr1 27876617 . G . PASS END=27876620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 27876621 . C . PASS END=27876627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 27876628 . G . PASS END=27876636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr1 27876637 . C . PASS END=27876637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 27876638 . C . PASS END=27876638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 27876639 . T . PASS END=27876692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 27876693 . G . PASS END=27876711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:16,0 chr1 27876712 . T . PASS END=27876712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 27876713 . C . PASS END=27876724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 27876725 . C . PASS END=27876725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 27876726 . G . PASS END=27876727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 27876728 . T . PASS END=27876728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 27876729 . G . PASS END=27876730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27876731 . G . PASS END=27876732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27876733 . A . PASS END=27876735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27876736 . G . PASS END=27876748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr1 27876749 . G . PASS END=27876749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 27876750 . C . PASS END=27876769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 27876770 . C . PASS END=27876770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27876771 . A . PASS END=27876772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27876773 . C . PASS END=27876773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 27876774 . T . PASS END=27876817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,62,255:25,0 chr1 27876818 . T . PASS END=27876818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 27876819 . G . PASS END=27876829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,893:0,75,255:25,0 chr1 27876830 . T . PASS END=27876830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 27876831 . G . PASS END=27876835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,64,255:21,0 chr1 27876836 . G . PASS END=27876836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,867:0,31,255:20,0 chr1 27876837 . G . PASS END=27876837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 27876838 . G . PASS END=27876839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 27876840 . G . PASS END=27876840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr1 27876841 . A . PASS END=27876841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27876842 . T . PASS END=27876842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 27876843 . G . PASS END=27876851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 27876852 . T . PASS END=27876875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,516:0,40,255:19,0 chr1 27876876 . A . LowGQ END=27876877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:18:0,0,280:0,0,255:13,0 chr1 27876878 . C . PASS END=27876878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 27876879 . T . PASS END=27876879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,329:0,1,255:11,0 chr1 27876880 . C . PASS END=27876880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,50,255:15,0 chr1 27876881 . T . PASS END=27876881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:3:17:0,3,437:0,3,255:13,0 chr1 27876882 . G . PASS END=27876882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:17:17:0,17,391:0,17,255:13,0 chr1 27876883 . G . PASS END=27876884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:15,0 chr1 27876885 . A . PASS END=27876885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 27876886 . T . LowGQ END=27876886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,321:38,0,255:11,0 chr1 27876887 . G . PASS END=27876887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,435:0,15,255:13,0 chr1 27876888 . G . PASS END=27876888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 27876889 . C . PASS END=27876889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:14,0 chr1 27876890 . C . PASS END=27876890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 27876891 . A . PASS END=27876891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:15,0 chr1 27876892 . T . LowGQ END=27876893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,400:0,0,255:13,0 chr1 27876894 . G . PASS END=27876899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,548:0,48,255:17,0 chr1 27876900 . G . PASS END=27876900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:15,0 chr1 27876901 . C . PASS END=27876901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 27876902 . T . PASS END=27876902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr1 27876903 . G . PASS END=27876906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 27876907 . C . PASS END=27876907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 27876908 . A . PASS END=27876908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 27876909 . G . LowGQ END=27876909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,457:18,0,255:13,0 chr1 27876910 . T . PASS END=27876910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr1 27876911 . G . PASS END=27876911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr1 27876912 . G . PASS END=27876912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 27876913 . C . PASS END=27876913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:15,0 chr1 27876914 . T . PASS END=27876914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 27876915 . G . PASS END=27876915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 27876916 . C . PASS END=27876916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 27876917 . C . PASS END=27876918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 27876919 . C . PASS END=27876919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr1 27876920 . G . PASS END=27876920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:12,0 chr1 27876921 . G . PASS END=27876923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 27876924 . G . LowGQ END=27876924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,410:2,0,255:11,0 chr1 27876925 . C . PASS END=27876929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 27876930 . A . PASS END=27876930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 27876931 . C . PASS END=27876931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27876932 . A . PASS END=27876932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 27876933 . G . LowGQ END=27876933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,355:40,0,255:10,0 chr1 27876934 . C . PASS END=27876934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 27876935 . T . PASS END=27876935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,410:0,12,255:10,0 chr1 27876936 . G . PASS END=27876937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 27876938 . C . PASS END=27876938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:11,0 chr1 27876939 . T . PASS END=27876939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 27876940 . C . PASS END=27876940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:11,0 chr1 27876941 . C . PASS END=27876941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 27876942 . T . PASS END=27876942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,388:0,12,255:12,0 chr1 27876943 . T . PASS END=27876943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 27876944 . G . PASS END=27876944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 27876945 . G . PASS END=27876946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 27876947 . C . PASS END=27876947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr1 27876948 . T . PASS END=27876950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 27876951 . C . PASS END=27876951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 27876952 . C . PASS END=27876955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 27876956 . A . PASS END=27876956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 27876957 . C . PASS END=27876960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 27876961 . G . PASS END=27876961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 27876962 . C . PASS END=27876962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 27876963 . A . PASS END=27876963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 27876964 . G . PASS END=27876964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 27876965 . C . PASS END=27876966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 27876967 . G . PASS END=27876967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 27876968 . G . PASS END=27876976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 27876977 . A . PASS END=27876977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 27876978 . G . PASS END=27876980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 27876981 . C . PASS END=27876981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 27876982 . G . PASS END=27876991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 27876992 . A . PASS END=27876992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 27876993 . C . PASS END=27877002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,463:0,45,255:16,0 chr1 27877003 . T . PASS END=27877003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 27877004 . A . PASS END=27877037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,487:0,48,255:17,0 chr1 27877038 . A . PASS END=27877038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 27877039 . C . PASS END=27877193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,527:0,45,255:19,0 chr1 27877194 . A . PASS END=27877211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 27877212 . C . PASS END=27877217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 27877218 . C . PASS END=27877229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 27877230 . C . PASS END=27877231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 27877232 . T . PASS END=27877235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 27877236 . C . PASS END=27877236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 27877237 . G . PASS END=27877242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 27877243 . A . PASS END=27877243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 27877244 . G . PASS END=27877254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,574:0,48,255:16,0 chr1 27877255 . T . PASS END=27877255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 27877256 . C . PASS END=27877270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,566:0,48,255:16,0 chr1 27877271 . C . PASS END=27877271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 27877272 . T . PASS END=27877272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 27877273 . T . PASS END=27877273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 27877274 . C . PASS END=27877276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 27877277 . C . PASS END=27877277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 27877278 . T . PASS END=27877278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr1 27877279 . C . PASS END=27877286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 27877287 . G . PASS END=27877287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 27877288 . A . PASS END=27877290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 27877291 . C . PASS END=27877293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 27877294 . G . PASS END=27877296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27877297 . C . PASS END=27877297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 27877298 . T . PASS END=27877299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27877300 . G . PASS END=27877300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 27877301 . G . PASS END=27877301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27877302 . C . PASS END=27877302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 27877303 . C . PASS END=27877306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 27877307 . C . PASS END=27877307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 27877308 . A . PASS END=27877309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27877310 . G . PASS END=27877310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 27877311 . G . PASS END=27877312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27877313 . A . PASS END=27877313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:13,0 chr1 27877314 . G . PASS END=27877316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27877317 . G . PASS END=27877317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 27877318 . G . PASS END=27877318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27877319 . T . PASS END=27877319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:12,0 chr1 27877320 . G . PASS END=27877333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 27877334 . T . PASS END=27877334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 27877335 . G . PASS END=27877336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27877337 . T . PASS END=27877337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 27877338 . G . PASS END=27877338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27877339 . G . PASS END=27877341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,512:0,31,255:13,0 chr1 27877342 . G . PASS END=27877343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 27877344 . T . PASS END=27877354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 27877355 . A . PASS END=27877355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 27877356 . G . PASS END=27877361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 27877362 . A . PASS END=27877363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 27877364 . C . PASS END=27877380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 27877381 . G . PASS END=27877386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 27877387 . G . PASS END=27877388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 27877389 . A . PASS END=27877391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 27877392 . C . PASS END=27877417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 27877418 . G A, 49.76 PASS DP=9;MQ=248.27;MQRankSum=2.219;ReadPosRankSum=1.159;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,4,0:0.444,0.000:9:3,2,0:2,2,0:48:85,0,50,143,179,322:128,0,167:4,0:4.9758e+01,6.7563e-05,5.3000e+01,1.4303e+02,2.1350e+02,3.2475e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,1,3:2,3,3,1 chr1 27877419 . C . PASS END=27877433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,247:0,21,247:7,0 chr1 27877434 . T . PASS END=27877455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,188:0,18,188:6,0 chr1 27877456 . T . PASS END=27877463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr1 27877464 . T . LowGQ END=27877471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:0:5:0,0,135:0,0,140:3,0 chr1 27877472 . C . PASS END=27877475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 27877476 . A . PASS END=27877477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 27877478 . G . PASS END=27877503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:6,0 chr1 27877504 . C . LowGQ END=27877505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:6,1 chr1 27877506 . G . PASS END=27877510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 27877511 . G . PASS END=27877520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 27877521 . G . PASS END=27877528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 27877529 . G . PASS END=27877529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 27877530 . T . PASS END=27877560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 27877561 . G . PASS END=27877562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 27877563 . C . PASS END=27877578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 27877579 . G . PASS END=27877579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 27877580 . C . PASS END=27877601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,398:0,36,255:13,0 chr1 27877602 . T . PASS END=27877611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 27877612 . T . PASS END=27877612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 27877613 . G . PASS END=27877627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,32,255:13,0 chr1 27877628 . T . PASS END=27877628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 27877629 . G . PASS END=27877639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 27877640 . A . PASS END=27877640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 27877641 . A . PASS END=27877656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr1 27877657 . A . PASS END=27877657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,486:0,15,255:13,0 chr1 27877658 . G . PASS END=27877676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 27877677 . A . PASS END=27877677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:14,0 chr1 27877678 . G . PASS END=27877695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,589:0,48,255:17,0 chr1 27877696 . C . PASS END=27877696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 27877697 . C . PASS END=27877742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:18,0 chr1 27877743 . A . PASS END=27877749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 27877750 . C . PASS END=27877790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 27877791 . T . PASS END=27877794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 27877795 . G . PASS END=27877795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 27877796 . G . PASS END=27877806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr1 27877807 . G . PASS END=27877820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 27877821 . G . PASS END=27877869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:17,0 chr1 27877870 . A . PASS END=27877870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 27877871 . A . PASS END=27877882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 27877883 . C . PASS END=27877895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 27877896 . A . PASS END=27877896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27877897 . T . PASS END=27877907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27877908 . G . PASS END=27877908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 27877909 . C . PASS END=27877922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr1 27877923 . T . PASS END=27877926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 27877927 . T . PASS END=27877927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 27877928 . G . PASS END=27877931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:16,0 chr1 27877932 . T . PASS END=27877932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 27877933 . C . PASS END=27877991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 27877992 . T . PASS END=27877992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 27877993 . G . PASS END=27877998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,613:0,40,255:18,0 chr1 27877999 . G . PASS END=27878006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 27878007 . C . PASS END=27878007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 27878008 . T . PASS END=27878008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,681:0,19,255:19,0 chr1 27878009 . G . PASS END=27878009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 27878010 . T . PASS END=27878010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 27878011 . C . PASS END=27878014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 27878015 . A . PASS END=27878015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 27878016 . G . PASS END=27878032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr1 27878033 . G . PASS END=27878035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27878036 . G . PASS END=27878038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 27878039 . G . PASS END=27878040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27878041 . G . PASS END=27878042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 27878043 . T . PASS END=27878064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1001:0,84,255:28,0 chr1 27878065 . C . PASS END=27878082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 27878083 . C . PASS END=27878089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27878090 . G . PASS END=27878090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 27878091 . C . PASS END=27878093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 27878094 . C . PASS END=27878094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 27878095 . G . PASS END=27878108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 27878109 . A . PASS END=27878109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 27878110 . A . PASS END=27878119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 27878120 . G . PASS END=27878124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 27878125 . A . PASS END=27878139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:24,0 chr1 27878140 . G . PASS END=27878140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 27878141 . G . PASS END=27878149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 27878150 . T . PASS END=27878161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 27878162 . C T, 47.62 PASS DP=23;MQ=250.00;MQRankSum=3.937;ReadPosRankSum=2.488;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,9,0:0.391,0.000:23:6,5,0:8,4,0:47:82,0,50,322,500,821:255,0,255:12,0:4.7621e+01,9.6815e-05,5.3000e+01,3.2151e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,4,5:12,2,6,3 chr1 27878163 . G . PASS END=27878167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27878168 . G . PASS END=27878168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27878169 . C . PASS END=27878176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,47,255:19,0 chr1 27878177 . G . PASS END=27878178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 27878179 . G . PASS END=27878199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 27878200 . C . PASS END=27878225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 27878226 . A . PASS END=27878226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,596:0,27,255:15,0 chr1 27878227 . G . PASS END=27878262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,607:0,40,255:19,0 chr1 27878263 . C . PASS END=27878265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 27878266 . C . PASS END=27878268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27878269 . G . PASS END=27878269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr1 27878270 . T . PASS END=27878275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:18,0 chr1 27878276 . G . PASS END=27878276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27878277 . T . PASS END=27878277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 27878278 . T . PASS END=27878278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27878279 . C . PASS END=27878279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 27878280 . A . PASS END=27878280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27878281 . C . PASS END=27878281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 27878282 . C . PASS END=27878282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27878283 . C . PASS END=27878283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 27878284 . G . PASS END=27878288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 27878289 . T . PASS END=27878289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 27878290 . T . PASS END=27878290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:20,0 chr1 27878291 . G . PASS END=27878291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27878292 . T . PASS END=27878292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:20,0 chr1 27878293 . C . PASS END=27878293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 27878294 . C . PASS END=27878295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 27878296 . A . PASS END=27878296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:20,0 chr1 27878297 . G . PASS END=27878297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 27878298 . C . PASS END=27878298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 27878299 . A . PASS END=27878299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 27878300 . G . PASS END=27878302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27878303 . T . PASS END=27878303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 27878304 . C . PASS END=27878306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27878307 . G . PASS END=27878324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,698:0,44,255:19,0 chr1 27878325 . A . PASS END=27878325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:15,0 chr1 27878326 . C . PASS END=27878327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 27878328 . G . PASS END=27878328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:15,0 chr1 27878329 . G . PASS END=27878339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,743:0,47,255:19,0 chr1 27878340 . C . PASS END=27878345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 27878346 . T . PASS END=27878349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:18,0 chr1 27878350 . A . PASS END=27878352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27878353 . C . PASS END=27878357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 27878358 . C . PASS END=27878361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27878362 . C . PASS END=27878362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 27878363 . T . PASS END=27878368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 27878369 . T . PASS END=27878369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 27878370 . G . PASS END=27878374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 27878375 . C . PASS END=27878384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,729:0,49,255:21,0 chr1 27878385 . T . PASS END=27878385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:18,0 chr1 27878386 . C . PASS END=27878387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 27878388 . C . PASS END=27878390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 27878391 . T . PASS END=27878395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 27878396 . A . PASS END=27878396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 27878397 . A . PASS END=27878399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 27878400 . A . PASS END=27878400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:17,0 chr1 27878401 . C . PASS END=27878401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 27878402 . T . PASS END=27878402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:18,0 chr1 27878403 . G . PASS END=27878404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 27878405 . T . PASS END=27878405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 27878406 . G . PASS END=27878408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 27878409 . C . PASS END=27878409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr1 27878410 . G . PASS END=27878410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 27878411 . C . PASS END=27878414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 27878415 . G . PASS END=27878415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27878416 . T . PASS END=27878416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 27878417 . G . PASS END=27878418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27878419 . T . PASS END=27878419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 27878420 . G . PASS END=27878423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27878424 . T . PASS END=27878424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,672:0,30,255:18,0 chr1 27878425 . C . PASS END=27878425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 27878426 . C . PASS END=27878431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 27878432 . T . PASS END=27878432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,570:0,21,255:18,0 chr1 27878433 . G . PASS END=27878437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 27878438 . T . PASS END=27878438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:4:20:0,4,553:0,4,255:17,0 chr1 27878439 . G . PASS END=27878442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 27878443 . G . PASS END=27878443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:17,0 chr1 27878444 . T . LowGQ END=27878444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,614:1,0,255:16,0 chr1 27878445 . G . PASS END=27878446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr1 27878447 . G . PASS END=27878447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 27878448 . T . PASS END=27878448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:18,0 chr1 27878449 . T . PASS END=27878449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,576:0,27,255:17,0 chr1 27878450 . C . PASS END=27878450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr1 27878451 . T . PASS END=27878451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 27878452 . C . PASS END=27878452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:19,0 chr1 27878453 . G . PASS END=27878453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27878454 . G . PASS END=27878454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 27878455 . A . PASS END=27878455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 27878456 . G . PASS END=27878456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 27878457 . A . LowGQ END=27878458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,613:3,0,255:19,0 chr1 27878459 . G . PASS END=27878460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 27878461 . C . PASS END=27878461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,790:0,20,255:22,0 chr1 27878462 . G . PASS END=27878463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,754:0,42,255:23,0 chr1 27878464 . G . PASS END=27878464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 27878465 . G . PASS END=27878465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 27878466 . G . PASS END=27878466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 27878467 . T . PASS END=27878467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:20,0 chr1 27878468 . G . PASS END=27878468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 27878469 . G . PASS END=27878469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,798:0,28,255:19,0 chr1 27878470 . A . LowGQ END=27878470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,742:10,0,255:18,0 chr1 27878471 . G . PASS END=27878471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:21,0 chr1 27878472 . A . PASS END=27878473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,737:0,28,255:19,0 chr1 27878474 . G . PASS END=27878475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,862:0,61,255:22,0 chr1 27878476 . C . PASS END=27878476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,792:0,23,255:21,0 chr1 27878477 . C . PASS END=27878478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:24:0,41,747:0,41,255:22,0 chr1 27878479 . T . PASS END=27878479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27878480 . G . PASS END=27878481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 27878482 . C . PASS END=27878482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:20,0 chr1 27878483 . A . PASS END=27878483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:6:24:0,6,657:0,6,255:18,0 chr1 27878484 . G . PASS END=27878485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27878486 . T . LowGQ END=27878486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,606:53,0,255:17,0 chr1 27878487 . G . PASS END=27878489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 27878490 . C . LowGQ END=27878491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,643:0,0,255:18,0 chr1 27878492 . G . PASS END=27878492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 27878493 . G . PASS END=27878493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 27878494 . C . PASS END=27878494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,773:0,25,255:19,0 chr1 27878495 . A . LowGQ END=27878495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,689:42,0,255:18,0 chr1 27878496 . G . PASS END=27878499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 27878500 . G . PASS END=27878500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:21,0 chr1 27878501 . C . PASS END=27878501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,735:0,25,255:20,0 chr1 27878502 . C . LowGQ END=27878502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,5:25:0:25:0,0,551:111,0,255:18,0 chr1 27878503 . G . PASS END=27878505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 27878506 . T . LowGQ END=27878506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,5:26:0:26:0,0,627:27,0,255:16,0 chr1 27878507 . G . PASS END=27878509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,894:0,64,255:23,0 chr1 27878510 . A . LowGQ END=27878511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,7:27:0:27:0,0,630:0,0,255:21,0 chr1 27878512 . G . PASS END=27878512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:23,0 chr1 27878513 . C . LowGQ END=27878514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,7:28:0:28:0,0,565:19,0,255:21,0 chr1 27878515 . G . PASS END=27878517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,990:0,67,255:22,0 chr1 27878518 . G . PASS END=27878518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,856:0,51,255:22,0 chr1 27878519 . C . LowGQ END=27878520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,8:28:0:28:0,0,427:21,0,255:20,1 chr1 27878521 . G . PASS END=27878522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:26,1 chr1 27878523 . G . PASS END=27878526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 27878527 . T . LowGQ END=27878527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,11:28:0:28:0,0,366:179,0,255:16,0 chr1 27878528 . G . PASS END=27878529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 27878530 . G . PASS END=27878530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:24,0 chr1 27878531 . G . PASS END=27878532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:26,0 chr1 27878533 . G . PASS END=27878533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:24,1 chr1 27878534 . G . PASS END=27878534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,803:0,36,255:24,0 chr1 27878535 . C . PASS END=27878536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:26,0 chr1 27878537 . G . PASS END=27878537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr1 27878538 . C . PASS END=27878538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 27878539 . C . PASS END=27878540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:40:29:0,40,931:0,40,255:28,1 chr1 27878541 . G . PASS END=27878549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:30,0 chr1 27878550 . T . PASS END=27878550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 27878551 . T . PASS END=27878569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1135:0,80,255:32,0 chr1 27878570 . A . PASS END=27878570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 27878571 . G . PASS END=27878571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 27878572 . G . PASS END=27878572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 27878573 . A . PASS END=27878573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:27,0 chr1 27878574 . G . PASS END=27878578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:29,0 chr1 27878579 . G . PASS END=27878579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:27,0 chr1 27878580 . C . PASS END=27878597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:30,0 chr1 27878598 . A . PASS END=27878618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,72,255:25,0 chr1 27878619 . A . PASS END=27878626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,808:0,33,255:23,0 chr1 27930145 . T . PASS END=27930145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 27939425 . C . PASS END=27939434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 27939435 . T . PASS END=27939580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,498:0,40,255:19,0 chr1 27939581 . C . PASS END=27939587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 27939588 . T . PASS END=27939588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:11,0 chr1 27939589 . G . PASS END=27939593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,504:0,39,255:13,0 chr1 27939594 . C . PASS END=27939594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 27939595 . C . PASS END=27939596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 27939597 . T . PASS END=27939597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 27939598 . G . PASS END=27939610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 27939611 . C . PASS END=27939613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 27939614 . C . PASS END=27939615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 27939616 . C . PASS END=27939617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 27939618 . T . PASS END=27939618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 27939619 . C . PASS END=27939622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 27939623 . T . PASS END=27939623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 27939624 . T . PASS END=27939624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 27939625 . T . PASS END=27939626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 27939627 . T . PASS END=27939628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 27939629 . C . PASS END=27939629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 27939630 . A . PASS END=27939630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 27939631 . T . PASS END=27939633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:16,0 chr1 27939730 . C . PASS END=27939835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:33:0,85,1156:0,85,255:40,0 chr1 27939836 . T . PASS END=27939836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:31,0 chr1 27939837 . G . PASS END=27939838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 27939839 . C . PASS END=27939840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:31,0 chr1 27939841 . A . PASS END=27939841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 27939842 . C . PASS END=27939842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr1 27939843 . T . PASS END=27939856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1119:0,82,255:31,0 chr1 27939857 . G . PASS END=27939857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 27939858 . G . PASS END=27939859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 27939860 . A . PASS END=27939860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 27939861 . C . PASS END=27939861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 27940941 . C . PASS END=27940973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 27940974 . G . PASS END=27941002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:23,0 chr1 27941003 . C . PASS END=27941003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 27941004 . A . PASS END=27941051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,887:0,62,255:26,0 chr1 27941052 . G . PASS END=27941052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 27941053 . A . PASS END=27941059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 27941060 . T . PASS END=27941060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 27941061 . T . PASS END=27941065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 27941066 . C . PASS END=27941066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,796:0,39,255:20,0 chr1 27941067 . G . PASS END=27941074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 27941075 . T . PASS END=27941094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:19:0,52,776:0,52,255:19,0 chr1 27941361 . C . PASS END=27941376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 27941377 . A . PASS END=27941377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 27941378 . C . PASS END=27941378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 27941379 . C . PASS END=27941379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 27941380 . A . PASS END=27941392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:19:0,50,660:0,50,255:22,0 chr1 27941393 . T . PASS END=27941397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 27941398 . T . PASS END=27941398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 27941399 . C . PASS END=27941421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,947:0,72,255:25,0 chr1 27941422 . A . PASS END=27941422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 27941423 . A . PASS END=27941437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr1 27941945 . C . PASS END=27941946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 27941947 . T . PASS END=27941961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,657:0,41,255:19,0 chr1 27941962 . G . PASS END=27941963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27941964 . C . PASS END=27941965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 27941966 . C . PASS END=27941967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 27941968 . A . PASS END=27941968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 27941969 . T . PASS END=27941975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 27941976 . G . PASS END=27941976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 27941977 . G . PASS END=27941987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 27941988 . C . PASS END=27941988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 27941989 . A . PASS END=27941999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr1 27942000 . C . PASS END=27942000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:24,0 chr1 27942001 . A . PASS END=27942001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 27942002 . G . PASS END=27942002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:24,0 chr1 27942003 . C . PASS END=27942027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 27942028 . A . PASS END=27942030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 27942031 . T . PASS END=27942034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 27942035 . T . PASS END=27942050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,645:0,54,255:19,0 chr1 27942051 . C . PASS END=27942052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 27942053 . G . PASS END=27942067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 27942068 . A . PASS END=27942068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 27942069 . C . PASS END=27942097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:18,0 chr1 27942098 . C . PASS END=27942100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr1 27942101 . C . PASS END=27942118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:15,0 chr1 27942119 . A . PASS END=27942124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 27942200 . C . PASS END=27942201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 27942202 . A . PASS END=27942202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr1 27942203 . G . PASS END=27942207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:18,0 chr1 27942208 . A . PASS END=27942208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 27942209 . C . PASS END=27942209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 27942210 . A . PASS END=27942210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 27942211 . T . PASS END=27942212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,647:0,57,255:19,0 chr1 27942213 . C . PASS END=27942213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 27942214 . C . PASS END=27942219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,613:0,40,255:18,0 chr1 27942220 . C . PASS END=27942220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 27942221 . A . PASS END=27942221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 27942222 . G . PASS END=27942224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27942225 . G . PASS END=27942225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 27942226 . G . PASS END=27942232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 27942233 . G . PASS END=27942235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 27942236 . G . PASS END=27942236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 27942237 . G . PASS END=27942238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 27942239 . G . PASS END=27942242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 27942243 . C . PASS END=27942281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,892:0,61,255:26,0 chr1 27942282 . G . PASS END=27942282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 27942283 . G . PASS END=27942287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,815:0,69,255:24,0 chr1 27942288 . G . PASS END=27942288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 27942289 . C . PASS END=27942291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 27942292 . A . PASS END=27942292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 27942293 . G . PASS END=27942306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 27942307 . A . PASS END=27942307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 27942308 . T . PASS END=27942322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 27942323 . C . PASS END=27942323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 27942324 . G . PASS END=27942327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 27942328 . A . PASS END=27942355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,52,255:21,0 chr1 27943368 . C . PASS END=27943517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:35:0,87,1260:0,105,255:40,0 chr1 27943704 . C . PASS END=27943705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 27943706 . T . PASS END=27943707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:16,0 chr1 27943708 . G . PASS END=27943719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 27943720 . T . PASS END=27943721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,590:0,35,255:15,0 chr1 27943722 . C . PASS END=27943742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 27943743 . G . PASS END=27943752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27943753 . T . PASS END=27943758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 27943759 . A . PASS END=27943769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27943770 . T . PASS END=27943775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 27943776 . C . PASS END=27943785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,664:0,60,255:20,0 chr1 27943786 . C . PASS END=27943789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 27943790 . A . PASS END=27943790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 27943791 . T . PASS END=27943793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 27943794 . T . PASS END=27943794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:17,0 chr1 27943795 . T . PASS END=27943807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 27948070 . T . PASS END=27948168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1260:0,97,255:40,0 chr1 27949553 . G . PASS END=27949655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,117,1755:0,150,255:40,0 chr1 27950202 . C . PASS END=27950207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 27950208 . C . PASS END=27950216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 27950217 . T . PASS END=27950217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 27950218 . G . PASS END=27950218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 27950219 . G . PASS END=27950219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 27950220 . T . PASS END=27950243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,545:0,48,255:19,0 chr1 27950244 . T . PASS END=27950244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,590:0,26,255:17,0 chr1 27950245 . G . PASS END=27950250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,743:0,50,255:20,0 chr1 27950251 . C . PASS END=27950253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 27950254 . A . PASS END=27950254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 27950255 . G . PASS END=27950258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27950259 . A . PASS END=27950282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,690:0,46,255:19,0 chr1 27950283 . G . PASS END=27950295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 27950296 . T . PASS END=27950304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 27950305 . G . PASS END=27950314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 27950315 . G . PASS END=27950315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 27950316 . G . PASS END=27950327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 27950328 . A . PASS END=27950328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:24,0 chr1 27950329 . G . PASS END=27950331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27950332 . G . PASS END=27950333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 27950334 . C . PASS END=27950336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 27950337 . C . PASS END=27950343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 27950344 . G . PASS END=27950344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,953:0,29,255:24,0 chr1 27950345 . T . PASS END=27950359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 27950360 . C . PASS END=27950364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 27950365 . C . PASS END=27950418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:26,0 chr1 27950419 . A . PASS END=27950427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr1 27992892 . C . PASS END=27992892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 27992893 . T . PASS END=27992894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 27992895 . C . PASS END=27992895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 27992896 . T . PASS END=27992898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 27992899 . T . PASS END=27992899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 27992900 . C . PASS END=27992901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 27992902 . T . PASS END=27992903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 27992904 . C . PASS END=27992905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 27992906 . C . PASS END=27992906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 27992907 . C . PASS END=27992907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 27992908 . T . PASS END=27992910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 27992911 . C . PASS END=27992911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 27992912 . T . PASS END=27992912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,705:0,14,255:20,0 chr1 27992913 . A . PASS END=27992913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 27992914 . T . PASS END=27992922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 27992923 . T . PASS END=27992923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 27992924 . T . PASS END=27992934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,925:0,75,255:25,0 chr1 27992935 . T . PASS END=27992936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 27992937 . G . PASS END=27992940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 27992941 . A . PASS END=27992941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 27992942 . T . PASS END=27992955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:20,0 chr1 27992956 . T . PASS END=27992967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,684:0,57,255:19,0 chr1 27992968 . A . PASS END=27992968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 27992969 . C . PASS END=27992986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 27994737 . C . PASS END=27994738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 27994739 . A . PASS END=27994752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,782:0,63,255:25,0 chr1 27994753 . G . PASS END=27994756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 27994757 . A . PASS END=27994757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 27994758 . C . PASS END=27994758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 27994759 . T . PASS END=27994759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 27994760 . A . PASS END=27994772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1027:0,87,255:30,0 chr1 27994773 . G . PASS END=27994773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 27994774 . C . PASS END=27994997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1109:0,80,255:40,0 chr1 27994998 . T . PASS END=27994998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 27994999 . T . PASS END=27995011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 27995012 . G . PASS END=27995012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 27995013 . C . PASS END=27995013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 27995014 . C . PASS END=27995039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:24,0 chr1 27995040 . T . PASS END=27995046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,870:0,72,255:24,0 chr1 27995732 . C . PASS END=27995787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:36:0,82,1319:0,82,255:39,0 chr1 27995788 . A . PASS END=27995788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:31,0 chr1 27995789 . G . PASS END=27995793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:32,0 chr1 27995794 . C . PASS END=27995794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:28,0 chr1 27995795 . A . PASS END=27995802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 27995803 . A . PASS END=27995803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 27995804 . G . PASS END=27995804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 27995805 . C . PASS END=27995806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 27995807 . A . PASS END=27995808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27995809 . A . PASS END=27995812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1084:0,74,255:26,0 chr1 27995813 . C . PASS END=27995816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 27995817 . C . PASS END=27995822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 27995823 . C . PASS END=27995824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 27995825 . T . PASS END=27995825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 28052592 . A . PASS END=28052600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,94:3,0 chr1 28052601 . C . PASS END=28052672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:6,0 chr1 28053983 . G . PASS END=28054047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:36:0,98,1344:0,98,255:40,0 chr1 28059114 . T . PASS END=28059168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,136,255:40,0 chr1 28060542 . C . PASS END=28060634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:30:0,86,1143:0,86,255:40,0 chr1 28060635 . T . PASS END=28060635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1527:0,77,255:39,0 chr1 28060636 . A . PASS END=28060661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,95,255:40,0 chr1 28060662 . T . PASS END=28060662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 28060663 . G . PASS END=28060663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 28060664 . T . PASS END=28060685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,61,255:26,0 chr1 28060686 . A . PASS END=28060694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 28071165 . G . PASS END=28071166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 28071167 . A . PASS END=28071167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 28071168 . G . PASS END=28071168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 28071169 . A . PASS END=28071169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:23,0 chr1 28071170 . T . PASS END=28071181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,919:0,75,255:26,0 chr1 28071182 . G . PASS END=28071199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,891:0,81,255:31,0 chr1 28071200 . T . PASS END=28071200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr1 28071201 . T . PASS END=28071201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 28071202 . C . PASS END=28071202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 28071203 . A . PASS END=28071250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,893:0,82,255:40,0 chr1 28071251 . T . PASS END=28071251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:40,0 chr1 28071252 . A . PASS END=28071289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:41:0,81,1215:0,90,255:40,0 chr1 28071290 . T . PASS END=28071306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 28071307 . G . PASS END=28071307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:22,0 chr1 28071308 . T . PASS END=28071311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:23,0 chr1 28071312 . C . PASS END=28071322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:20:0,56,851:0,56,255:19,0 chr1 28075579 . C . PASS END=28075665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,174,255:40,0 chr1 28076571 . G . PASS END=28076700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:45:0,81,1215:0,119,255:40,0 chr1 28076701 . A . PASS END=28076709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:63:27:0,63,945:0,81,255:24,0 chr1 28076710 . C . PASS END=28076715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 28076716 . C . PASS END=28076716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 28076717 . T . PASS END=28076729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,50,255:19,0 chr1 28076730 . T . PASS END=28076733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 28081706 . C . PASS END=28081706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 28081707 . T . PASS END=28081709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 28081710 . T . PASS END=28081716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 28081717 . A . PASS END=28081729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:29:0,86,1094:0,86,255:36,0 chr1 28081730 . C . PASS END=28081730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:35,0 chr1 28081731 . T . PASS END=28081841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:36:0,108,1365:0,108,255:40,0 chr1 28086037 . A . PASS END=28086168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:49:0,120,1800:0,136,255:40,0 chr1 28087006 . G . PASS END=28087018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1028:0,90,255:30,0 chr1 28087019 . A . PASS END=28087019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 28087020 . G . PASS END=28087028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:30,0 chr1 28087029 . G . PASS END=28087029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr1 28087030 . C . PASS END=28087030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 28087031 . A . PASS END=28087031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 28087032 . G . PASS END=28087032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 28087033 . G . PASS END=28087033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 28087034 . C . PASS END=28087040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1190:0,99,255:33,0 chr1 28087041 . T . PASS END=28087047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1121:0,85,255:33,0 chr1 28087048 . A . PASS END=28087048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:33,0 chr1 28087049 . A . PASS END=28087069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1170:0,83,255:33,0 chr1 28087070 . C . PASS END=28087074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:25,0 chr1 28087075 . G . PASS END=28087075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:22,0 chr1 28087076 . C . PASS END=28087092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,77,255:26,0 chr1 28099819 . A . PASS END=28099821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:19,0 chr1 28099822 . T . PASS END=28099824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 28099825 . T . PASS END=28099825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 28099826 . A . PASS END=28099850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,701:0,60,255:26,0 chr1 28099851 . C . PASS END=28099851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 28099852 . C . PASS END=28099856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 28099857 . G . PASS END=28099860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 28099861 . T . PASS END=28099861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 28099862 . C . PASS END=28099924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1082:0,80,255:33,0 chr1 28099925 . T . PASS END=28099936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,917:0,64,255:26,0 chr1 28116073 . C . PASS END=28116142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:41:0,92,1419:0,92,255:40,0 chr1 28120044 . G . PASS END=28120130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:43:0,96,1443:0,96,255:40,0 chr1 28120131 . T . PASS END=28120131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:38:42:0,38,1302:0,38,255:28,0 chr1 28120132 . A . PASS END=28120143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:37:0,90,1350:0,94,255:34,0 chr1 28128189 . C . PASS END=28128199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 28128200 . A . PASS END=28128200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 28128201 . C . PASS END=28128208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 28128209 . G . PASS END=28128213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 28128214 . G . PASS END=28128214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 28128215 . C . PASS END=28128225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 28128226 . A . PASS END=28128226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 28128227 . C . PASS END=28128228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 28128229 . T . PASS END=28128229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr1 28128230 . C . PASS END=28128238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr1 28128239 . C . PASS END=28128241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28128242 . A . PASS END=28128249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,737:0,49,255:19,0 chr1 28128250 . T . PASS END=28128250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28128251 . C . PASS END=28128251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 28128252 . C . PASS END=28128277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,892:0,66,255:25,0 chr1 28128278 . A . PASS END=28128278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 28128279 . A . PASS END=28128305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,832:0,61,255:25,0 chr1 28128306 . A . PASS END=28128326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:18:0,40,629:0,40,255:19,0 chr1 28136757 . G . PASS END=28136800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,102,1499:0,102,255:40,0 chr1 28138503 . C . PASS END=28138571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1426:0,101,255:40,0 chr1 28138674 . C . PASS END=28138779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:46:0,81,1641:0,81,255:40,0 chr1 28144362 . G . PASS END=28144434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,134,255:40,0 chr1 28146161 . A . PASS END=28146243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:39:0,102,1519:0,110,255:40,0 chr1 28148742 . A . PASS END=28148840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:44:0,115,1471:0,115,255:40,0 chr1 28157347 . A . PASS END=28157347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,778:0,41,255:22,0 chr1 28157348 . T . PASS END=28157394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,884:0,72,255:25,0 chr1 28157395 . C . PASS END=28157399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 28157400 . C . PASS END=28157402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 28159267 . G . PASS END=28159313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:31:0,90,1125:0,93,255:40,0 chr1 28159314 . A . PASS END=28159314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1338:0,73,255:38,0 chr1 28159315 . C . PASS END=28159327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:39:0,86,1054:0,86,255:39,0 chr1 28165210 . A . PASS END=28165363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:43:0,99,1485:0,116,255:40,0 chr1 28167525 . C . PASS END=28167562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,825:0,61,255:26,0 chr1 28167563 . C . PASS END=28167616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1094:0,80,255:30,0 chr1 28167617 . A . PASS END=28167618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 28167619 . G . PASS END=28167722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1185:0,80,255:40,1 chr1 28167723 . C . PASS END=28167723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 28167724 . A . PASS END=28167725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 28167726 . A . PASS END=28167726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 28167727 . G . PASS END=28167741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 28167742 . T . PASS END=28167743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 28167744 . A . PASS END=28167745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28169697 . A . PASS END=28169839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:84:39:0,84,1220:0,84,255:40,0 chr1 28169840 . A . PASS END=28169840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:27,0 chr1 28169841 . G . PASS END=28169841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 28173539 . A . PASS END=28173603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,108,1499:0,114,255:40,0 chr1 28176604 . A . PASS END=28176604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 28176605 . A . PASS END=28176605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 28176606 . G . PASS END=28176606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 28176607 . A . PASS END=28176607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 28176608 . A . PASS END=28176651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:16,0 chr1 28176652 . A . PASS END=28176652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 28176653 . G . PASS END=28176655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 28176656 . G . PASS END=28176699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,659:0,41,255:19,0 chr1 28176700 . C . PASS END=28176702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 28176703 . C . PASS END=28176710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 28176711 . A . PASS END=28176711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:15,0 chr1 28176712 . C . PASS END=28176729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 28176730 . C . PASS END=28176734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 28176735 . A . PASS END=28176748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 28176749 . G . PASS END=28176750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28176751 . A . PASS END=28176751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 28176752 . C . PASS END=28176770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 28176771 . G . PASS END=28176771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 28176772 . C . PASS END=28176788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,773:0,63,255:24,0 chr1 28176789 . C . PASS END=28176789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 28176790 . C . PASS END=28176792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 28176793 . G . PASS END=28176793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 28176794 . C . PASS END=28176821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,939:0,69,255:25,0 chr1 28176822 . G . PASS END=28176825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 28176826 . T . PASS END=28176832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28176833 . T . PASS END=28176887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1111:0,80,255:36,0 chr1 28176888 . A . PASS END=28176888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:34,0 chr1 28176889 . C . PASS END=28176898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1160:0,91,255:35,0 chr1 28176899 . A . PASS END=28176899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:33,0 chr1 28176900 . G . PASS END=28176906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1180:0,85,255:34,0 chr1 28176907 . G . PASS END=28176908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:33,0 chr1 28176909 . A . PASS END=28176916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1103:0,85,255:33,0 chr1 28176917 . C . PASS END=28176917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr1 28176918 . T . PASS END=28176920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:32,0 chr1 28176921 . G . PASS END=28176921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1124:0,44,255:30,0 chr1 28176922 . C . PASS END=28176926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:32,0 chr1 28176927 . C . PASS END=28176927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:27,0 chr1 28176928 . A . PASS END=28176929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 28176930 . G . PASS END=28176936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:67:28:0,67,947:0,67,255:25,0 chr1 28176937 . A . PASS END=28176938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:25,0 chr1 28176939 . A . PASS END=28176939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,914:0,37,255:23,0 chr1 28176940 . C . PASS END=28176940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 28176941 . C . PASS END=28176941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:23,0 chr1 28176942 . T . PASS END=28176942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 28176943 . T . PASS END=28176943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:23,0 chr1 28176944 . C . PASS END=28176944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 28176945 . C . PASS END=28176945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:21,0 chr1 28176946 . T . PASS END=28176946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 28176947 . T . PASS END=28176947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,750:0,47,255:22,0 chr1 28176948 . G . PASS END=28176948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:22,0 chr1 28176949 . C . PASS END=28176949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:22,0 chr1 28176950 . T . PASS END=28176951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 28176952 . A . PASS END=28176952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,798:0,28,255:21,0 chr1 28176953 . T . PASS END=28176954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 28176955 . T . PASS END=28176955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr1 28176956 . G . PASS END=28176956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr1 28176957 . A . PASS END=28176957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 28199083 . A . PASS END=28199099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:22,0 chr1 28199100 . G . PASS END=28199100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 28199101 . C . PASS END=28199104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 28199105 . A . PASS END=28199105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 28199106 . C . PASS END=28199155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 28199156 . G . PASS END=28199166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 28199167 . T . PASS END=28199176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,41,255:12,0 chr1 28203099 . G . PASS END=28203099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr1 28203100 . C . PASS END=28203110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,621:0,48,255:17,0 chr1 28203111 . A . PASS END=28203111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr1 28203112 . G . PASS END=28203112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 28203113 . A . PASS END=28203113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:16,0 chr1 28203114 . T . PASS END=28203135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,607:0,41,255:19,0 chr1 28203136 . C . PASS END=28203139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 28203140 . A . PASS END=28203140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 28203141 . C . PASS END=28203147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 28203148 . C . PASS END=28203148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 28203149 . C . PASS END=28203155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:25,0 chr1 28203156 . A . PASS END=28203170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr1 28203171 . G . PASS END=28203171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 28203172 . C . PASS END=28203189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 28203190 . T . PASS END=28203190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 28203191 . G . PASS END=28203208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,948:0,84,255:29,0 chr1 28203209 . C . PASS END=28203227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1016:0,71,255:26,0 chr1 28203228 . C . PASS END=28203228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 28203229 . C . PASS END=28203233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 28203234 . T . PASS END=28203234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 28203235 . C . PASS END=28203239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 28206155 . G . PASS END=28206156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 28206157 . T . PASS END=28206157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 28206158 . A . PASS END=28206158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 28206159 . C . PASS END=28206159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 28206160 . T . PASS END=28206164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 28206165 . C . PASS END=28206165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 28206166 . C . PASS END=28206172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 28206173 . A . PASS END=28206173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 28206174 . C . PASS END=28206193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,907:0,62,255:25,0 chr1 28206194 . C . PASS END=28206199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 28206200 . A . PASS END=28206210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,929:0,65,255:26,0 chr1 28206211 . T . PASS END=28206223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1007:0,81,255:29,0 chr1 28206224 . A . PASS END=28206237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,913:0,62,255:26,0 chr1 28206238 . C . PASS END=28206238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,784:0,45,255:21,0 chr1 28206239 . T . PASS END=28206241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 28206242 . C . PASS END=28206242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 28206243 . C . PASS END=28206263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:23,0 chr1 28206264 . C . PASS END=28206264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 28206265 . A . PASS END=28206265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 28206266 . G . PASS END=28206266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 28206267 . G . PASS END=28206267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 28206268 . A . PASS END=28206268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr1 28206269 . T . PASS END=28206271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 28206272 . T . PASS END=28206272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 28206273 . C . PASS END=28206276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr1 28206277 . G . PASS END=28206278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 28206279 . G . PASS END=28206313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr1 28206314 . T . PASS END=28206316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr1 28206317 . A . PASS END=28206333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 28206334 . C . PASS END=28206411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,643:0,40,255:19,0 chr1 28206412 . G . PASS END=28206412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 28206413 . G . PASS END=28206416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:17,0 chr1 28206417 . C . PASS END=28206417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr1 28206418 . T . PASS END=28206418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 28206419 . T . PASS END=28206419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 28206420 . C . PASS END=28206449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,558:0,45,255:17,0 chr1 28206450 . T . PASS END=28206450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 28206451 . C . PASS END=28206455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 28206456 . C . PASS END=28206459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 28206460 . G . PASS END=28206464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 28206465 . A . PASS END=28206465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 28206466 . C . PASS END=28206473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 28206474 . A . PASS END=28206474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 28206475 . G . PASS END=28206479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 28206480 . G . PASS END=28206480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 28206481 . A . PASS END=28206484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 28206485 . A . PASS END=28206485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 28206486 . C . PASS END=28206487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28206488 . T . PASS END=28206490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,585:0,35,255:13,0 chr1 28206491 . T . PASS END=28206491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,543:0,20,255:13,0 chr1 28206492 . C . PASS END=28206492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 28206493 . C . PASS END=28206495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28206496 . A . PASS END=28206498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:14,0 chr1 28206499 . T . PASS END=28206499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 28206500 . G . PASS END=28206500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,490:0,17,255:14,0 chr1 28206501 . C . PASS END=28206501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 28206502 . C . PASS END=28206502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 28206503 . C . PASS END=28206508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 28206509 . T . PASS END=28206510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:14,0 chr1 28206511 . C . PASS END=28206512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28206513 . C . PASS END=28206513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr1 28206514 . T . PASS END=28206514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28206515 . G . PASS END=28206515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:14,0 chr1 28206516 . G . PASS END=28206517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28206518 . A . PASS END=28206519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,551:0,34,255:14,0 chr1 28206520 . T . PASS END=28206523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 28206524 . T . PASS END=28206524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:14,0 chr1 28206525 . G . PASS END=28206530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:15,0 chr1 28206531 . G . PASS END=28206532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 28206533 . G . PASS END=28206535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 28206536 . C . PASS END=28206542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 28206543 . T . PASS END=28206543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,398:0,3,255:11,0 chr1 28206544 . G . PASS END=28206547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:12,0 chr1 28206548 . T . PASS END=28206548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 28206549 . C . PASS END=28206550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 28206551 . A . PASS END=28206553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,427:0,36,255:12,0 chr1 28206554 . C . PASS END=28206554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 28206555 . C . PASS END=28206555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 28206556 . A . PASS END=28206562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 28206563 . A . PASS END=28206563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:8,0 chr1 28206564 . C . PASS END=28206564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 28206565 . A . LowGQ END=28206565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,261:3,0,255:7,0 chr1 28208482 . T . PASS END=28208482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 28208483 . G . PASS END=28208506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 28208507 . T . PASS END=28208507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 28208508 . T . PASS END=28208535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:24,0 chr1 28208536 . T . PASS END=28208536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 28208537 . C . PASS END=28208538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 28208539 . C . PASS END=28208541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 28208542 . C . PASS END=28208543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 28208544 . T . PASS END=28208544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 28208545 . C . PASS END=28208559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 28208560 . A . PASS END=28208560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 28208561 . C . PASS END=28208562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 28208563 . T . PASS END=28208564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 28208565 . A . PASS END=28208574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 28208575 . T . PASS END=28208585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 28208586 . G . PASS END=28208586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 28208587 . A . PASS END=28208603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:17,0 chr1 28208604 . G . PASS END=28208607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 28208608 . C . PASS END=28208609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28208610 . T . PASS END=28208612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 28208613 . C . PASS END=28208614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28208615 . C . PASS END=28208621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 28208622 . A . PASS END=28208627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:14,0 chr1 28208628 . A . PASS END=28208630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 28208631 . C . PASS END=28208720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,497:0,45,255:19,0 chr1 28208721 . T . PASS END=28208724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 28208725 . C . PASS END=28208725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 28208726 . A . PASS END=28208726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28208727 . C . PASS END=28208742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 28208743 . C . PASS END=28208744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28208745 . T . PASS END=28208764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 28208765 . G . PASS END=28208769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 28208770 . G . PASS END=28208770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 28208771 . G . PASS END=28208772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 28208773 . A . PASS END=28208809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,623:0,40,255:18,0 chr1 28208810 . G . PASS END=28208810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 28208811 . C . PASS END=28208832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,613:0,51,255:18,0 chr1 28208833 . C . PASS END=28208833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 28208834 . G . PASS END=28208839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 28208840 . T . PASS END=28208841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:13,0 chr1 28208842 . A . PASS END=28208846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 28208847 . C . PASS END=28208847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 28208848 . T . PASS END=28208848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 28208849 . A . PASS END=28208851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 28208852 . T . PASS END=28208852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:11,0 chr1 28208853 . G . PASS END=28208857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 28208858 . C . PASS END=28208858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 28208859 . C . PASS END=28208861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 28208862 . C . PASS END=28208862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 28208863 . C . PASS END=28208865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 28208866 . G . PASS END=28208866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 28208867 . C . PASS END=28208873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 28208874 . C . PASS END=28208874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 28208875 . T . PASS END=28208875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 28208876 . C . PASS END=28208883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 28208884 . T . PASS END=28208884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 28208885 . G . PASS END=28208885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 28208886 . G . PASS END=28208894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:17,0 chr1 28208895 . G . PASS END=28208895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 28208896 . A . PASS END=28208924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 28208925 . G . PASS END=28208931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 28208932 . C . PASS END=28208932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 28208933 . G . PASS END=28208933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 28208934 . T . PASS END=28208934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 28208935 . C . PASS END=28208940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:24,0 chr1 28208941 . C . PASS END=28208941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr1 28208942 . T . PASS END=28208947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 28208948 . T . PASS END=28208948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 28208949 . G . PASS END=28208951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 28208952 . C . PASS END=28208952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 28208953 . G . PASS END=28208954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 28208955 . C . PASS END=28208955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 28208956 . T . PASS END=28208958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 28208959 . A . PASS END=28208959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 28208960 . G . PASS END=28208960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28208961 . G . PASS END=28208968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:20,0 chr1 28208969 . G . PASS END=28208969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr1 28208970 . C . PASS END=28208971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 28208972 . T . PASS END=28208972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr1 28208973 . G . PASS END=28208973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 28208974 . G . PASS END=28208974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:23,0 chr1 28208975 . C . PASS END=28208975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 28208976 . C . PASS END=28208976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 28208977 . A . PASS END=28208981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,917:0,75,255:26,0 chr1 28208982 . C . PASS END=28209016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,942:0,81,255:30,0 chr1 28209017 . T . PASS END=28209018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 28209019 . G . PASS END=28209049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 28209050 . T . PASS END=28209050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 28209051 . G . PASS END=28209053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 28209054 . G . PASS END=28209054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 28209055 . A . PASS END=28209055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 28209056 . G . PASS END=28209056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 28209057 . G . PASS END=28209057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 28209058 . A . PASS END=28209058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 28209059 . A . PASS END=28209059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 28209060 . G . PASS END=28209060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,939:0,29,255:27,0 chr1 28209061 . A . PASS END=28209061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28209062 . G . PASS END=28209062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,890:0,40,255:24,0 chr1 28209063 . T . PASS END=28209063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:26,0 chr1 28209064 . G . PASS END=28209064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,901:0,54,255:25,0 chr1 28209065 . C . PASS END=28209073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 28209074 . G . PASS END=28209075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:48:27:0,48,823:0,48,255:23,0 chr1 28209076 . C . PASS END=28209082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,80,255:24,0 chr1 28209083 . C . PASS END=28209083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:21,0 chr1 28209084 . C . PASS END=28209087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,984:0,68,255:26,0 chr1 28209088 . A . PASS END=28209111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1031:0,84,255:30,0 chr1 28209112 . T . PASS END=28209123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:28:0,73,1033:0,73,255:26,0 chr1 28209124 . T . PASS END=28209127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 28209128 . G . PASS END=28209168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,963:0,75,255:26,0 chr1 28209169 . T . PASS END=28209169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 28209170 . G . PASS END=28209185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 28209186 . C . PASS END=28209200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr1 28209201 . A . PASS END=28209204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:18,0 chr1 28209205 . T . PASS END=28209206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,723:0,24,255:18,0 chr1 28209207 . G . PASS END=28209208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 28209209 . G . PASS END=28209210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 28209211 . C . PASS END=28209216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,590:0,18,255:18,0 chr1 28209217 . A . PASS END=28209217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 28209218 . C . PASS END=28209219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 28209220 . C . PASS END=28209223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:16,0 chr1 28209224 . C . PASS END=28209224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 28209225 . C . PASS END=28209225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:13,0 chr1 28209226 . A . PASS END=28209228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:15,0 chr1 28209229 . C . PASS END=28209230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 28209231 . A . PASS END=28209231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:14,0 chr1 28209232 . C . PASS END=28209232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 28209233 . T . PASS END=28209236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:16,0 chr1 28209237 . C . PASS END=28209237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 28209238 . C . PASS END=28209240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:17,0 chr1 28209241 . T . PASS END=28209241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 28209242 . G . PASS END=28209242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 28209243 . A . PASS END=28209243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:14,0 chr1 28209244 . C . PASS END=28209246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:15:18:0,15,620:0,15,255:15,0 chr1 28209247 . C . PASS END=28209247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 28209248 . C . PASS END=28209248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:14,0 chr1 28209249 . T . PASS END=28209249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 28209250 . T . PASS END=28209254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,529:0,12,255:15,0 chr1 28209255 . G . PASS END=28209256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 28209257 . C . PASS END=28209258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:15,0 chr1 28209259 . T . PASS END=28209259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 28209260 . G . PASS END=28209260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 28209261 . C . PASS END=28209261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 28209262 . G . PASS END=28209262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 28209263 . G . PASS END=28209267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 28209268 . A . PASS END=28209268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:14,0 chr1 28209269 . G . PASS END=28209304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:17,0 chr1 28209305 . A G, 48.98 PASS DP=17;MQ=250.00;MQRankSum=3.367;ReadPosRankSum=1.805;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,7,0:0.412,0.000:17:8,5,0:2,2,0:48:84,0,50,250,329,579:220,0,255:7,0:4.8977e+01,7.6623e-05,5.3000e+01,2.5044e+02,3.6369e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,3,4:5,5,5,2 chr1 28209306 . G . PASS END=28209361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:19,0 chr1 28209362 . T C, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.200;ReadPosRankSum=1.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:6,10,0:0.625,0.000:16:3,5,0:3,5,0:46:85,0,45,185,185,185:255,0,154:6,0:5.0000e+01,1.1545e-04,4.7804e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,3,5,5:4,2,6,4:28209362 chr1 28209363 . G . PASS END=28209365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 28209366 . A G, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.200;ReadPosRankSum=1.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:6,10,0:0.625,0.000:16:3,5,0:3,5,0:46:85,0,45,185,185,185:255,0,184:6,0:5.0000e+01,1.1545e-04,4.7804e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,3,5,5:4,2,6,4:28209362 chr1 28209367 . A . PASS END=28209367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 28209368 . G . PASS END=28209393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:16,0 chr1 28209394 . A . PASS END=28209394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 28209395 . G . PASS END=28209399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr1 28209400 . C . PASS END=28209400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 28209401 . T . PASS END=28209406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr1 28209407 . C . PASS END=28209425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,630:0,40,255:17,0 chr1 28209426 . C . PASS END=28209426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 28209427 . T . PASS END=28209428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 28209429 . A . PASS END=28209431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 28209432 . G . PASS END=28209434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:18,0 chr1 28209435 . A . PASS END=28209435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 28209436 . C . PASS END=28209455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,674:0,41,255:19,0 chr1 28209456 . A . PASS END=28209456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 28209457 . A . PASS END=28209460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr1 28209461 . A . PASS END=28209461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,582:0,2,255:15,0 chr1 28209462 . C . PASS END=28209476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,651:0,41,255:19,0 chr1 28209477 . C . PASS END=28209478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 28209479 . A . PASS END=28209482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 28209483 . C . PASS END=28209483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 28209484 . C . PASS END=28209507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,627:0,40,255:18,0 chr1 28209508 . A . PASS END=28209508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:18,0 chr1 28209509 . G . PASS END=28209523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,599:0,54,255:18,0 chr1 28209524 . G . PASS END=28209524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 28209525 . A . PASS END=28209538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 28209539 . T . PASS END=28209540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 28209541 . A . PASS END=28209542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 28209543 . G . PASS END=28209543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 28209544 . G . PASS END=28209551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 28209552 . A . PASS END=28209554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 28211806 . T . PASS END=28211806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 28211807 . C . PASS END=28211808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,929:0,75,255:25,0 chr1 28211809 . T . PASS END=28211809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,947:0,54,255:27,0 chr1 28211810 . C . PASS END=28211810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 28211811 . T . PASS END=28211947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1233:0,86,255:40,0 chr1 28211948 . A . PASS END=28211956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,67,255:25,0 chr1 28211957 . A . PASS END=28211962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,68,255:19,0 chr1 28212378 . A . PASS END=28212433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:55:0,120,1800:0,147,255:40,0 chr1 28218674 . T . PASS END=28218758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:45:0,110,1684:0,110,255:40,0 chr1 28220523 . T . PASS END=28220617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,117,1755:0,128,255:40,0 chr1 28220801 . C . PASS END=28220908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1133:0,80,255:40,0 chr1 28223516 . C . PASS END=28223518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr1 28223519 . G . PASS END=28223520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 28223521 . T . PASS END=28223522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 28223523 . T . PASS END=28223523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 28223524 . T . PASS END=28223606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:30:0,90,1103:0,90,255:40,0 chr1 28223607 . T . PASS END=28223607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:32,0 chr1 28223608 . T . PASS END=28223632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1099:0,80,255:33,0 chr1 28224144 . C . PASS END=28224165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1308:0,91,255:40,1 chr1 28224166 . G . PASS END=28224166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1407:0,74,255:40,0 chr1 28224167 . C . PASS END=28224218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:37:0,93,1410:0,93,255:40,0 chr1 28233439 . A . PASS END=28233522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:45:0,119,1607:0,119,255:40,0 chr1 28233523 . T . PASS END=28233552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:52:0,117,1755:0,140,255:40,0 chr1 28233692 . C . PASS END=28233701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1159:0,83,255:32,0 chr1 28233702 . T . PASS END=28233702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:30,0 chr1 28233703 . C . PASS END=28233781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:30:0,81,1215:0,90,255:40,0 chr1 28233782 . G . PASS END=28233782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:26,0 chr1 28233783 . G . PASS END=28233793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 28240574 . T . PASS END=28240596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,429:0,36,255:13,0 chr1 28240597 . G . PASS END=28240626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,519:0,42,255:18,0 chr1 28240627 . G . PASS END=28240631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 28240632 . T . PASS END=28240654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 28240655 . G . PASS END=28240655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 28240656 . G . PASS END=28240703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,713:0,50,255:19,0 chr1 28240704 . G . PASS END=28240706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28240707 . T . PASS END=28240707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 28240708 . G . PASS END=28240724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,798:0,63,255:24,0 chr1 28240725 . T . PASS END=28240725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 28240726 . C . PASS END=28240731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:24,0 chr1 28240732 . A . PASS END=28240732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 28240733 . A . PASS END=28240743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 28240744 . C . PASS END=28240744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28240745 . C . PASS END=28240746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 28240747 . G . PASS END=28240747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr1 28240748 . G . PASS END=28240749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 28240750 . G . PASS END=28240834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1181:0,84,255:40,0 chr1 28240835 . C . PASS END=28240835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1474:0,77,255:40,0 chr1 28240836 . T . PASS END=28240877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,99,1422:0,99,255:40,0 chr1 28240878 . A . PASS END=28240878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:33:46:0,33,1378:0,33,255:37,0 chr1 28240879 . G . PASS END=28240953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:30:0,84,1172:0,85,255:40,0 chr1 28240954 . T . PASS END=28240954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 28241138 . G . PASS END=28241171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1216:0,83,255:33,0 chr1 28261695 . A . PASS END=28261701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 28261702 . T . PASS END=28261706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 28261707 . G . PASS END=28261721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 28261722 . C . PASS END=28261725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr1 28261726 . C . PASS END=28261727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28261728 . A . PASS END=28261736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28261737 . G . PASS END=28261755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:26,0 chr1 28268786 . A . PASS END=28268788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 28268789 . A . PASS END=28268821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:29:0,60,900:0,70,255:25,0 chr1 28268822 . A . PASS END=28268832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:54:36:0,54,810:0,94,255:19,0 chr1 28268833 . C CG, 49.81 PASS DP=36;MQ=250.00;MQRankSum=5.102;ReadPosRankSum=-1.711;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,17,0:0.472,0.000:36:7,11,0:12,6,0:47:80,0,47,180,180,180:255,0,255:18,23:4.9814e+01,8.8790e-05,5.0000e+01,1.8458e+02,2.1458e+02,1.8759e+02:0.00,30.00,33.01,34.77,64.77,37.78:9,10,5,12:9,10,9,8:28268833 chr1 28268834 . C . LowGQ END=28268834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,16:36:0:36:0,0,185:255,0,255:32,0 chr1 28268835 . A C, 49.81 PASS DP=36;MQ=250.00;MQRankSum=5.102;ReadPosRankSum=-1.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,17,0:0.472,0.000:36:7,11,0:12,6,0:47:85,0,47,185,185,185:255,0,255:17,0:4.9814e+01,8.8790e-05,5.0000e+01,1.8458e+02,2.1935e+02,1.8759e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,10,5,12:9,10,9,8:28268833 chr1 28268836 . A . PASS END=28268845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,91,255:31,0 chr1 28268846 . T . PASS END=28268846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:27,0 chr1 28268847 . G . PASS END=28268848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 28268849 . C . PASS END=28268870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr1 28268871 . A . PASS END=28268871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 28268872 . G . PASS END=28268875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 28271743 . G . PASS END=28271757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,574:0,51,255:17,0 chr1 28271758 . T . PASS END=28271770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 28271771 . C . PASS END=28271778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,853:0,80,255:27,0 chr1 28271779 . C . PASS END=28271780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 28271781 . G . PASS END=28271784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28271785 . A . PASS END=28271789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 28271790 . G . PASS END=28271790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28271791 . T . PASS END=28271791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 28271792 . A . PASS END=28271800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 28271801 . C . PASS END=28271802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28271803 . C . PASS END=28271805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 28271806 . T . PASS END=28271807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1086:0,74,255:28,0 chr1 28271808 . C . PASS END=28271852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1133:0,90,255:36,0 chr1 28271853 . C . PASS END=28271857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,92,255:26,0 chr1 28271858 . G . PASS END=28271865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 28271866 . A . PASS END=28271866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:26,0 chr1 28271867 . C . PASS END=28271874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 28271875 . A . PASS END=28271875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28271876 . T . PASS END=28271878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28271879 . T . PASS END=28271879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28271880 . C . PASS END=28271885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 28271886 . G . PASS END=28271901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:25,0 chr1 28271902 . C . PASS END=28271902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 28271903 . C . PASS END=28271906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 28271907 . T . PASS END=28271907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 28271908 . A . PASS END=28271908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 28271909 . T . PASS END=28271909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 28271910 . G . PASS END=28271910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28271911 . C . PASS END=28271921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 28271922 . A . PASS END=28271933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,642:0,60,255:20,0 chr1 28271934 . C . PASS END=28271954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,675:0,43,255:19,0 chr1 28271955 . G . PASS END=28271955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 28271956 . G . PASS END=28271956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 28275505 . A . PASS END=28275538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:53:0,120,1800:0,126,255:40,0 chr1 28275576 . T . PASS END=28275673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,99,1485:0,116,255:40,0 chr1 28279726 . A . PASS END=28279869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,120,1800:0,134,255:40,0 chr1 28280865 . G . PASS END=28280892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 28280893 . T . PASS END=28281015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1024:0,81,255:40,0 chr1 28281016 . T . PASS END=28281017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 28281018 . C . PASS END=28281021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 28281022 . C . PASS END=28281022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:28,0 chr1 28281023 . A . PASS END=28281023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 28281024 . A . PASS END=28281033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:26,0 chr1 28281034 . C . PASS END=28281037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:26:0,45,765:0,45,255:19,0 chr1 28282195 . G . PASS END=28282227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1125:0,82,255:40,0 chr1 28282228 . T . PASS END=28282228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1337:0,76,255:39,0 chr1 28282229 . T . PASS END=28282254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,107,1488:0,107,255:40,0 chr1 28282255 . T . PASS END=28282291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,128,255:40,0 chr1 28282292 . T C, 49.27 PASS DP=57;MQ=249.93;MQRankSum=6.449;ReadPosRankSum=1.883;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,26,0:0.456,0.000:57:15,15,0:16,11,0:48:84,0,50,901,1106,2007:255,0,255:27,0:4.9274e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,11,15:16,15,8,18 chr1 28282293 . C . PASS END=28282329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,122,255:40,0 chr1 28282330 . G . PASS END=28282375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,140,255:40,0 chr1 28282460 . G . PASS END=28282627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:36:0,90,1350:0,92,255:40,0 chr1 28282628 . G . PASS END=28282628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:29,0 chr1 28282629 . G . PASS END=28282632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:31,0 chr1 28282633 . G . PASS END=28282633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 28282634 . G . PASS END=28282634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 28282635 . G . PASS END=28282635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 28282636 . C . PASS END=28282637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 28282638 . T . PASS END=28282644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:28:0,68,1014:0,68,255:26,0 chr1 28282645 . A . PASS END=28282645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:25,0 chr1 28282646 . T . PASS END=28282653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,848:0,61,255:24,0 chr1 28282654 . T . PASS END=28282661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 28282662 . C . PASS END=28282665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr1 28282666 . C . PASS END=28282690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr1 28282691 . C . PASS END=28282691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 28282692 . T . PASS END=28282701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 28282702 . G . PASS END=28282702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 28282703 . A . PASS END=28282704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 28282705 . G . PASS END=28282705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 28282706 . G . PASS END=28282710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 28284987 . G . PASS END=28285002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 28285003 . T . PASS END=28285047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:13,0 chr1 28285048 . A . PASS END=28285048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 28285049 . G . PASS END=28285102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 28285103 . C . PASS END=28285104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 28285105 . T . PASS END=28285105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 28285106 . G . PASS END=28285108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 28285109 . C . PASS END=28285112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 28285113 . G . PASS END=28285145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr1 28285146 . C . PASS END=28285152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 28285153 . G . PASS END=28285153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 28285154 . C . PASS END=28285158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28285159 . A . PASS END=28285159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr1 28285160 . C . PASS END=28285203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 28285204 . C . PASS END=28285204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 28285205 . C . PASS END=28285211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28285212 . A . PASS END=28285219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 28285220 . C . PASS END=28285235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 28285236 . C . PASS END=28285236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 28285237 . A . PASS END=28285237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 28285238 . G . PASS END=28285238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 28285239 . G . PASS END=28285239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 28285240 . T . PASS END=28285241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 28285242 . G . PASS END=28285250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,784:0,66,255:22,0 chr1 28285251 . G . PASS END=28285252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 28285253 . T . PASS END=28285253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 28285254 . T . PASS END=28285254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 28285255 . A . PASS END=28285260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 28285261 . C . PASS END=28285261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:19,0 chr1 28285262 . C . PASS END=28285271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 28285272 . G . PASS END=28285274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 28285275 . T . PASS END=28285275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,623:0,24,255:18,0 chr1 28285276 . C . PASS END=28285294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 28285295 . C . PASS END=28285295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 28285296 . C . PASS END=28285305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 28285306 . T . PASS END=28285318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 28285319 . C . PASS END=28285319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 28285320 . C . PASS END=28285322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 28285323 . C . PASS END=28285323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 28285324 . T . PASS END=28285327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 28285328 . C . PASS END=28285328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:10,0 chr1 28285329 . C . PASS END=28285331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 28285332 . T . PASS END=28285332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 28285333 . G . PASS END=28285333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 28285334 . C . PASS END=28285334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 28285335 . A . PASS END=28285335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 28285336 . C . PASS END=28285336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 28285337 . G . PASS END=28285338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 28285339 . T . PASS END=28285342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 28285343 . G . PASS END=28285343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 28285344 . C . PASS END=28285344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 28285345 . T . PASS END=28285345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 28285346 . G . PASS END=28285349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 28286581 . A . PASS END=28286581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 28286582 . T . PASS END=28286595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:18,0 chr1 28286596 . C . PASS END=28286596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 28286597 . G . PASS END=28286609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,676:0,44,255:19,0 chr1 28286610 . T . PASS END=28286659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:23,0 chr1 28286660 . T . PASS END=28286672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 28286673 . G . PASS END=28286680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 28286681 . C . PASS END=28286702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:18,0 chr1 28286703 . C . PASS END=28286703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 28286704 . C . PASS END=28286707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 28286708 . A . PASS END=28286708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 28286709 . C . PASS END=28286712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 28286713 . T . PASS END=28286713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 28286714 . G . PASS END=28286716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 28286717 . C . PASS END=28286717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 28286718 . G . PASS END=28286718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:12,0 chr1 28286719 . G . PASS END=28286749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,31,255:13,0 chr1 28286750 . C . PASS END=28286752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 28286753 . T . PASS END=28286753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 28286754 . G . PASS END=28286754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 28286755 . G . PASS END=28286755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 28286756 . C . PASS END=28286757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 28286758 . C . PASS END=28286758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:13,0 chr1 28286759 . T . PASS END=28286759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 28286760 . G . PASS END=28286760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 28286761 . C . PASS END=28286761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:11,0 chr1 28286762 . A . PASS END=28286762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 28286763 . G . PASS END=28286764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:11,0 chr1 28286765 . T . PASS END=28286765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,352:0,25,255:11,0 chr1 28286766 . C . PASS END=28286766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 28286767 . T . PASS END=28286767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:10,0 chr1 28286768 . T . PASS END=28286768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 28286769 . C . PASS END=28286769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 28286770 . A . PASS END=28286777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 28286778 . C . PASS END=28286786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr1 28286787 . C . PASS END=28286787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 28286788 . G . PASS END=28286801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 28286802 . C . PASS END=28286812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 28286813 . C . PASS END=28286813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:6,0 chr1 28286814 . G . PASS END=28286846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 28286847 . T . PASS END=28286847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 28286848 . C . PASS END=28286855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 28286856 . G . PASS END=28286861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 28286862 . T . PASS END=28286862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 28286863 . T . PASS END=28286869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,241:6,0 chr1 28286870 . A . PASS END=28286873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:6:0,9,135:0,18,233:3,0 chr1 28290008 . G . PASS END=28290018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,917:0,72,255:25,0 chr1 28290019 . A . PASS END=28290162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:27:0,80,978:0,80,255:38,0 chr1 28290163 . T . PASS END=28290163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:28,0 chr1 28290164 . G . PASS END=28290171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1119:0,90,255:30,0 chr1 28290172 . T . PASS END=28290172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:27,0 chr1 28290173 . G . PASS END=28290174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 28290175 . T . PASS END=28290175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 28290176 . G . PASS END=28290180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 28290181 . G . PASS END=28290191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 28290192 . G . PASS END=28290193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:26:0,57,855:0,78,255:19,0 chr1 28290194 . G . PASS END=28290204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:21:0,48,720:0,63,255:19,0 chr1 28290696 . A . PASS END=28290696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1389:0,93,255:38,0 chr1 28290697 . G . PASS END=28290697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:36:42:0,36,1035:0,36,255:36,0 chr1 28291390 . C . PASS END=28291390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 28291391 . C . PASS END=28291400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,390:0,33,255:12,0 chr1 28291401 . A . PASS END=28291406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 28291407 . C . PASS END=28291407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 28291408 . C . PASS END=28291411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:13,0 chr1 28291412 . C . PASS END=28291412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 28291413 . T . PASS END=28291428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 28291429 . G . PASS END=28291429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 28291430 . T . PASS END=28291440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 28291441 . G . PASS END=28291449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr1 28291450 . T . PASS END=28291452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 28291453 . G . PASS END=28291460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 28291461 . G . PASS END=28291506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 28291507 . G . PASS END=28291508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 28291509 . C . PASS END=28291523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:12,0 chr1 28291862 . G . PASS END=28291969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:38:0,84,1301:0,84,255:40,0 chr1 28292230 . G . PASS END=28292354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:37:0,90,1350:0,96,255:40,0 chr1 28292355 . G . PASS END=28292385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 28292386 . C . PASS END=28292386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 28292387 . C . PASS END=28292387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 28292388 . A . PASS END=28292388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 28292389 . G . PASS END=28292392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 28293014 . G . PASS END=28293335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1083:0,83,255:40,0 chr1 28293336 . C . PASS END=28293336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 28293337 . T . PASS END=28293412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1149:0,80,255:33,0 chr1 28293413 . T . PASS END=28293414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 28293415 . C . PASS END=28293418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:27,0 chr1 28293419 . T . PASS END=28293447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 28293448 . T . PASS END=28293448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 28293449 . G . PASS END=28293457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 28293458 . G . PASS END=28293460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 28293461 . G . PASS END=28293476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 28293477 . G . PASS END=28293477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 28293478 . T . PASS END=28293512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,945:0,62,255:27,0 chr1 28293513 . C . PASS END=28293514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:27,0 chr1 28293515 . T . PASS END=28293518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:25,0 chr1 28293519 . T . PASS END=28293519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:24,0 chr1 28293520 . C . PASS END=28293528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 28293529 . G . PASS END=28293532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28293533 . A . PASS END=28293533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 28293534 . C . PASS END=28293540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 28293541 . T . PASS END=28293557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,967:0,65,255:26,0 chr1 28293558 . C . PASS END=28293567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 28293568 . C . PASS END=28293571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 28293572 . A . PASS END=28293581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 28293582 . G . PASS END=28293582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 28293583 . G . PASS END=28293597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 28293598 . A . PASS END=28293598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 28293599 . G . PASS END=28293599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28293600 . T . PASS END=28293613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1008:0,68,255:26,0 chr1 28293614 . A . PASS END=28293625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 28293626 . T . PASS END=28293632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,93,255:26,0 chr1 28293633 . G . PASS END=28293637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:30,0 chr1 28293638 . G . PASS END=28293638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 28293639 . G . PASS END=28293644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 28293645 . G . PASS END=28293645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:28,0 chr1 28293646 . A . PASS END=28293659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:30,0 chr1 28293660 . G . PASS END=28293660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 28293661 . A . PASS END=28293672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 28293673 . A . PASS END=28293673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 28293674 . A . PASS END=28293681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 28293682 . G . PASS END=28293682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 28293683 . A . PASS END=28293697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 28293698 . C . PASS END=28293700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 28293701 . T . PASS END=28293704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28293705 . G . PASS END=28293707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 28293708 . A . PASS END=28293708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:25,0 chr1 28293709 . T . PASS END=28293711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,71,255:23,0 chr1 28300977 . T . PASS END=28300980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1389:0,114,255:38,0 chr1 28300981 . A . PASS END=28300981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:37,0 chr1 28300982 . G . PASS END=28301057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,104,1259:0,104,255:40,0 chr1 28303793 . T . PASS END=28303799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:23:0,64,812:0,64,255:26,0 chr1 28303800 . T . PASS END=28303900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:28:0,80,1125:0,80,255:40,0 chr1 28304750 . T . PASS END=28304974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:96:39:0,96,1381:0,96,255:40,0 chr1 28304975 . G . PASS END=28304975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 28304976 . C . PASS END=28304983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,90,255:28,0 chr1 28304984 . A . PASS END=28304985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1170:0,75,255:26,0 chr1 28315046 . C . PASS END=28315167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:34:0,85,1102:0,85,255:40,0 chr1 28316208 . C . PASS END=28316322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:41:0,111,1590:0,113,255:40,0 chr1 28319911 . C . PASS END=28320055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1105:0,80,255:40,0 chr1 28320056 . T . PASS END=28320056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:26,0 chr1 28320057 . G . PASS END=28320059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 28320060 . A . PASS END=28320068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 28320069 . T . PASS END=28320069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:22,0 chr1 28320070 . T . PASS END=28320071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:23,0 chr1 28323831 . C . PASS END=28323889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,141,255:40,0 chr1 28326471 . C . PASS END=28326560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,134,255:40,0 chr1 28330847 . C . PASS END=28330930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,131,255:40,0 chr1 28337458 . T . PASS END=28337461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1105:0,90,255:31,0 chr1 28337462 . A . PASS END=28337462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 28337463 . A . PASS END=28337463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr1 28337464 . T . PASS END=28337464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr1 28337465 . T . PASS END=28337597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:31:0,84,1141:0,93,255:40,0 chr1 28339622 . C . PASS END=28339628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1036:0,84,255:31,0 chr1 28339629 . A . PASS END=28339629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 28339630 . A . PASS END=28339775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1166:0,86,255:40,0 chr1 28339776 . C . PASS END=28339780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 28339781 . C . PASS END=28339781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 28339782 . A . PASS END=28339785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:22,0 chr1 28339786 . A . PASS END=28339793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:23:0,45,675:0,69,255:19,0 chr1 28339794 . G . PASS END=28339805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,31,255:13,0 chr1 28343665 . C . PASS END=28343750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,159,255:40,2 chr1 28354300 . C . PASS END=28354306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr1 28354307 . G . PASS END=28354307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 28354308 . G . PASS END=28354392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:31:0,80,1129:0,80,255:40,0 chr1 28354393 . T . PASS END=28354422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,848:0,61,255:26,0 chr1 28354423 . C . PASS END=28354437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:18,0 chr1 28362055 . C . PASS END=28362185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,88,255:40,0 chr1 28362186 . T . PASS END=28362191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:25,0 chr1 28365350 . T . PASS END=28365416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,120,1800:0,147,255:40,0 chr1 28369082 . T . PASS END=28369161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,131,255:40,0 chr1 28374894 . C . PASS END=28374937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:98:0,120,1800:0,239,255:40,0 chr1 28383143 . C . PASS END=28383148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,169,255:40,0 chr1 28384505 . T . PASS END=28384537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:74:0,120,1800:0,204,255:40,0 chr1 28476504 . C . PASS END=28476504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 28476505 . T . PASS END=28476505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 28476506 . A . PASS END=28476509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 28476510 . T . PASS END=28476510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 28476511 . T . PASS END=28476517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 28476518 . A . PASS END=28476519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,682:0,46,255:21,0 chr1 28476520 . T C, 49.94 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=3.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:5,4,0:6,6,0:48:85,0,50,358,357,714:255,0,255:11,0:4.9937e+01,6.5751e-05,5.3000e+01,3.5752e+02,3.9129e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,3,6,4:2,9,8,2 chr1 28476521 . T . PASS END=28476521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr1 28476522 . G . PASS END=28476525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr1 28476526 . G . PASS END=28476526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:20,0 chr1 28476527 . G . PASS END=28476532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 28476533 . G . PASS END=28476535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28476536 . T . PASS END=28476536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 28476537 . G . PASS END=28476538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 28476539 . A . PASS END=28476540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,951:0,65,255:26,0 chr1 28476541 . G . PASS END=28476542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28476543 . C . PASS END=28476550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 28476551 . C . PASS END=28476554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 28476555 . A . PASS END=28476555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 28476556 . G . PASS END=28476557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 28476558 . G . PASS END=28476558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 28476559 . A . PASS END=28476584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 28476585 . T . PASS END=28476585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:34,0 chr1 28476586 . T . PASS END=28476820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,81,255:40,0 chr1 28476821 . A . PASS END=28476822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 28476823 . A . PASS END=28476824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 28476825 . C . PASS END=28476825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 28476826 . G . PASS END=28476826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28476827 . T . PASS END=28476827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 28476828 . G . PASS END=28476843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 28476844 . G . PASS END=28476844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 28476845 . C . PASS END=28476850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 28476851 . G . PASS END=28476851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 28476852 . C . PASS END=28476853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:29,0 chr1 28476854 . T . PASS END=28476855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 28476856 . A . PASS END=28476858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 28476859 . T . PASS END=28476861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 28476862 . G . PASS END=28476864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 28476865 . T . PASS END=28476865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 28476866 . T . PASS END=28476870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28476871 . T . PASS END=28476896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,941:0,65,255:26,0 chr1 28476897 . G . PASS END=28476898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 28476899 . T . PASS END=28476902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 28476903 . G . PASS END=28476904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 28476905 . T . PASS END=28476912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1002:0,70,255:26,0 chr1 28476913 . A . PASS END=28476913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr1 28476914 . G . PASS END=28476915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 28476916 . T . PASS END=28476918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28476919 . C . PASS END=28476919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 28476920 . A . PASS END=28476921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 28476922 . A . PASS END=28476922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 28476923 . A . PASS END=28476923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr1 28476924 . G . PASS END=28476925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 28476926 . G . PASS END=28476928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 28476929 . T . PASS END=28476929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 28476930 . G . PASS END=28476949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,987:0,84,255:29,0 chr1 28476950 . A . PASS END=28476950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 28476951 . G . PASS END=28477017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1027:0,80,255:36,0 chr1 28477018 . C . PASS END=28477018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:30,0 chr1 28477019 . G . PASS END=28477074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1156:0,83,255:35,0 chr1 28477075 . A . PASS END=28477075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:33,0 chr1 28477076 . G . PASS END=28477124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1093:0,82,255:35,0 chr1 28477125 . A . PASS END=28477125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,973:0,55,255:27,0 chr1 28477126 . G . PASS END=28477126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 28477127 . A . PASS END=28477127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1168:0,72,255:27,0 chr1 28477128 . G . PASS END=28477141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1085:0,80,255:31,0 chr1 28477142 . G . PASS END=28477142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:28,0 chr1 28477143 . G . PASS END=28477174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1155:0,80,255:37,0 chr1 28477175 . T . PASS END=28477175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr1 28477176 . T . PASS END=28477195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1435:0,104,255:40,0 chr1 28477196 . A . PASS END=28477196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1381:0,71,255:38,0 chr1 28477197 . A . PASS END=28477391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:34:0,88,1195:0,88,255:40,0 chr1 28477392 . C . PASS END=28477392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 28477393 . T . PASS END=28477408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:89:35:0,89,1270:0,89,255:36,0 chr1 28477409 . G . PASS END=28477409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:32,0 chr1 28477410 . G . PASS END=28477412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1296:0,94,255:35,0 chr1 28477413 . A . PASS END=28477413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr1 28477414 . A . PASS END=28477441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1258:0,81,255:36,0 chr1 28477442 . T . PASS END=28477442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1326:0,67,255:34,0 chr1 28477443 . G . PASS END=28477517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1117:0,80,255:38,0 chr1 28477518 . G . PASS END=28477521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 28477522 . T . PASS END=28477526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 28477527 . C . PASS END=28477532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,70,255:26,0 chr1 28526709 . T . PASS END=28526728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,717:0,63,255:23,0 chr1 28526729 . G . PASS END=28526729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:22,0 chr1 28526730 . G . PASS END=28526737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 28526738 . C . PASS END=28526738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 28526739 . T . PASS END=28526743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 28527759 . T . PASS END=28527881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,104,1410:0,104,255:40,0 chr1 28530258 . C . PASS END=28530333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:65:0,120,1800:0,134,255:40,0 chr1 28531769 . C . PASS END=28531860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:51:0,120,1800:0,122,255:40,0 chr1 28534853 . C . PASS END=28534924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,132,255:40,0 chr1 28536483 . A . PASS END=28536577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,183,255:40,0 chr1 28537082 . C . PASS END=28537148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,117,1800:0,117,255:40,0 chr1 28541451 . C . PASS END=28541487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1248:0,81,255:38,0 chr1 28541488 . T . PASS END=28541488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 28541489 . C . PASS END=28541507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,102,255:36,0 chr1 28555433 . C . PASS END=28555463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,99,1256:0,99,255:40,0 chr1 28555464 . C . PASS END=28555526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,118,1800:0,118,255:40,0 chr1 28555527 . T . PASS END=28555534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,118,1584:0,118,255:40,0 chr1 28559432 . C . PASS END=28559493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1157:0,80,255:34,0 chr1 28559494 . C . PASS END=28559494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr1 28559495 . T . PASS END=28559500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 28559501 . A . PASS END=28559509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,959:0,65,255:25,0 chr1 28562695 . A . PASS END=28562713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:24,0 chr1 28562714 . C . PASS END=28562720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:26,0 chr1 28562721 . G . PASS END=28562721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 28562722 . A . PASS END=28562725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 28562726 . G . PASS END=28562729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28562730 . T . PASS END=28562730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 28562731 . G . PASS END=28562739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 28562740 . G . PASS END=28562740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 28562741 . G . PASS END=28562742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 28562743 . G . PASS END=28562763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr1 28562764 . G . PASS END=28562773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 28562774 . C . PASS END=28562775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 28562776 . G . PASS END=28562777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28562778 . T . PASS END=28562778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 28562779 . C . PASS END=28562779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28562780 . A . PASS END=28562780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28562781 . G . PASS END=28562781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28562872 . T . PASS END=28562942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1093:0,80,255:33,0 chr1 28562943 . T . PASS END=28562944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 28562945 . A . PASS END=28562945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 28562946 . A . PASS END=28562946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 28562947 . G . PASS END=28562949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 28562950 . G . PASS END=28562955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 28562956 . T . PASS END=28562960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28562961 . C . PASS END=28562967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 28564272 . A . PASS END=28564278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:67:0,120,1800:0,162,255:40,0 chr1 28564279 . A G, 272.71 PASS DP=75;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,75,0:1.000,0.000:75:0,34,0:0,41,0:223:310,226,0,2860,226,2860:255,229,0:0,0:2.7271e+02,2.2271e+02,0.0000e+00,4.5000e+02,2.5748e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,52,23:0,0,29,46 chr1 28564280 . G . PASS END=28564308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,204,255:40,0 chr1 28564348 . A . PASS END=28564489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:76:0,120,1800:0,215,255:40,0 chr1 28573100 . A . PASS END=28573148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,109,1731:0,109,255:40,0 chr1 28586359 . A . PASS END=28586362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,623:0,51,255:18,0 chr1 28586363 . T . PASS END=28586372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 28586373 . C . PASS END=28586376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 28586377 . G . PASS END=28586377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 28586378 . A . PASS END=28586386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 28586387 . C . PASS END=28586402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 28586403 . C . PASS END=28586414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,504:0,31,255:13,0 chr1 28586415 . C . PASS END=28586415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 28586416 . C . PASS END=28586427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 28586428 . G . PASS END=28586448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 28595694 . G . PASS END=28595705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 28595706 . A . PASS END=28595706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 28595707 . G . PASS END=28595716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:18,0 chr1 28595717 . G . PASS END=28595717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 28595718 . C . PASS END=28595719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 28595720 . A . PASS END=28595724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 28595725 . C . PASS END=28595728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28595729 . A . PASS END=28595729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 28595730 . G . PASS END=28595735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:21,0 chr1 28595736 . A . PASS END=28595737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 28595738 . C . PASS END=28595741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28595742 . T . PASS END=28595742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:19,0 chr1 28595743 . T . PASS END=28595743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28595744 . C . PASS END=28595750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr1 28595751 . G . PASS END=28595751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,615:0,21,255:17,0 chr1 28595752 . T . PASS END=28595754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,601:0,43,255:17,0 chr1 28595755 . A . PASS END=28595755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:16,0 chr1 28595756 . G . PASS END=28595759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:16,0 chr1 28598185 . G . PASS END=28598189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,795:0,63,255:23,0 chr1 28598190 . T . PASS END=28598190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 28598191 . C . PASS END=28598194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 28598195 . A . PASS END=28598195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 28598196 . G . PASS END=28598209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,892:0,69,255:25,0 chr1 28598210 . T . PASS END=28598210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr1 28598211 . C . PASS END=28598212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 28598213 . A . PASS END=28598213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr1 28598214 . G . PASS END=28598217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 28598218 . C . PASS END=28598218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28598219 . A . PASS END=28598219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:25,0 chr1 28598220 . C . PASS END=28598227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:32,0 chr1 28598228 . T . PASS END=28598228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 28598229 . G . PASS END=28598255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1150:0,80,255:33,0 chr1 28598256 . A . PASS END=28598256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 28598257 . G . PASS END=28598257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 28598258 . A . PASS END=28598258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,1050:0,54,255:31,0 chr1 28598259 . C . PASS END=28598311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1185:0,80,255:34,0 chr1 28598312 . G . PASS END=28598312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 28598313 . C . PASS END=28598328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:31,0 chr1 28598329 . C . PASS END=28598335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:30:0,76,1049:0,76,255:26,0 chr1 28598336 . C . PASS END=28598341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:27,0 chr1 28598342 . G . PASS END=28598358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,939:0,64,255:25,0 chr1 28598359 . T . PASS END=28598377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr1 28598378 . T . PASS END=28598382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 28598795 . G . PASS END=28598805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1166:0,96,255:33,0 chr1 28598806 . C . PASS END=28598806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:32,0 chr1 28598807 . C . PASS END=28598807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1241:0,99,255:33,0 chr1 28598808 . A . PASS END=28598808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:31,0 chr1 28598809 . T . PASS END=28598913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1157:0,80,255:37,0 chr1 28598914 . A . PASS END=28598914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,959:0,41,255:29,0 chr1 28598915 . C . PASS END=28598921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1174:0,85,255:31,0 chr1 28598922 . A . PASS END=28598922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1185:0,55,255:28,0 chr1 28598923 . G . PASS END=28598927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 28598928 . A . PASS END=28598928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 28598929 . C . PASS END=28598929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 28598930 . A . PASS END=28598931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1066:0,77,255:30,0 chr1 28598932 . G . PASS END=28598935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 28598936 . C . PASS END=28598936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 28598937 . T . PASS END=28598943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 28598944 . T . PASS END=28598946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 28598947 . G . PASS END=28598950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:28,0 chr1 28598951 . T . PASS END=28598952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 28598953 . G . PASS END=28598956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:28,0 chr1 28598957 . A . PASS END=28598957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 28598958 . T . PASS END=28598965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,983:0,87,255:29,0 chr1 28598966 . G . PASS END=28598966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 28598967 . A . PASS END=28598975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 28598976 . A . PASS END=28598976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:28,0 chr1 28598977 . G . PASS END=28598977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 28599092 . G . PASS END=28599094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 28599095 . T . PASS END=28599096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:26,0 chr1 28599097 . G . PASS END=28599100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 28599101 . A . PASS END=28599101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 28599102 . A . PASS END=28599102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 28599103 . G . PASS END=28599224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1059:0,82,255:40,0 chr1 28599225 . G . PASS END=28599247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,71,255:26,0 chr1 28599248 . A . PASS END=28599257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:22:0,42,630:0,66,255:19,0 chr1 28599258 . G . PASS END=28599259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:39:20:0,39,585:0,52,255:13,0 chr1 28599260 . G . PASS END=28599261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:14,0 chr1 28599262 . A . PASS END=28599277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,435:0,36,255:12,0 chr1 28599278 . A . PASS END=28599278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 28599279 . G . PASS END=28599280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 28599281 . A . PASS END=28599281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 28599282 . G . PASS END=28599302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 28599303 . G . PASS END=28599304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 28599869 . G . PASS END=28599870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 28599871 . C . PASS END=28599877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 28599878 . T . PASS END=28599878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 28599879 . C . PASS END=28599901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:26,0 chr1 28599902 . A . PASS END=28599903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 28599904 . G . PASS END=28599906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,947:0,67,255:26,0 chr1 28599907 . G . PASS END=28599914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:31,0 chr1 28599915 . A . PASS END=28599915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 28599916 . G . PASS END=28599965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1180:0,93,255:34,0 chr1 28599966 . T . PASS END=28599966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1062:0,79,255:31,0 chr1 28599967 . G . PASS END=28599971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1186:0,96,255:32,0 chr1 28599972 . G . PASS END=28599972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 28599973 . C . PASS END=28599976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 28599977 . T . PASS END=28599977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr1 28599978 . T . PASS END=28599989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 28599990 . A . PASS END=28599990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 28599991 . G . PASS END=28599999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 28600000 . C . PASS END=28600011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:25,0 chr1 28600012 . C . PASS END=28600019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:19,0 chr1 28600551 . C . PASS END=28600559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:25,0 chr1 28600560 . T . PASS END=28600560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 28600561 . G . PASS END=28600568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,870:0,61,255:26,0 chr1 28600569 . C . PASS END=28600572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 28600573 . A . PASS END=28600573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 28600574 . C . PASS END=28600591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:30,0 chr1 28600592 . T . PASS END=28600592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,912:0,73,255:28,0 chr1 28600593 . T . PASS END=28600629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1202:0,86,255:32,0 chr1 28600630 . T . PASS END=28600669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr1 28601336 . G . PASS END=28601342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr1 28601343 . C . PASS END=28601353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:23,0 chr1 28601354 . C . PASS END=28601354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 28601355 . A . PASS END=28601382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,860:0,69,255:25,0 chr1 28601383 . C . PASS END=28601417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:31,0 chr1 28601418 . A . PASS END=28601418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 28601419 . G . PASS END=28601419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 28601420 . G . PASS END=28601420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 28601421 . C . PASS END=28601421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 28601422 . A . PASS END=28601422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 28601423 . G . PASS END=28601430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1149:0,82,255:30,0 chr1 28601431 . C . PASS END=28601431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:29,0 chr1 28601432 . C . PASS END=28601433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 28601434 . C . PASS END=28601434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 28601435 . A . PASS END=28601459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1113:0,80,255:32,0 chr1 28601460 . G . PASS END=28601461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 28601462 . G . PASS END=28601462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 28601463 . G . PASS END=28601463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:27,0 chr1 28601464 . T . PASS END=28601464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 28601465 . G . PASS END=28601466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:67:35:0,67,1170:0,67,255:26,0 chr1 28601467 . G . PASS END=28601471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 28601472 . C . PASS END=28601473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 28601474 . T . PASS END=28601477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 28601478 . T . PASS END=28601520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,868:0,69,255:25,0 chr1 28601521 . C . PASS END=28601526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 28605608 . A . PASS END=28605615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 28605616 . A . PASS END=28605616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 28605617 . C . PASS END=28605629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 28605630 . G . PASS END=28605632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr1 28605633 . G . PASS END=28605633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 28605634 . T . PASS END=28605636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1054:0,87,255:29,0 chr1 28605637 . A . PASS END=28605637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 28605638 . C . PASS END=28605642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:30,0 chr1 28605643 . T . PASS END=28605643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 28605644 . C . PASS END=28605647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 28605648 . G . PASS END=28605648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 28605649 . A . PASS END=28605687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1186:0,86,255:34,0 chr1 28605688 . A . PASS END=28605688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:28,0 chr1 28605689 . C . PASS END=28605717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1129:0,83,255:30,0 chr1 28605718 . A . PASS END=28605742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:25,0 chr1 28605743 . C . PASS END=28605743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 28605744 . T . PASS END=28605749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 28605750 . A . PASS END=28605752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 28607227 . G . PASS END=28607271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1260:0,97,255:38,0 chr1 28607272 . C . PASS END=28607272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:28,0 chr1 28607273 . T . PASS END=28607304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:33,0 chr1 28607305 . A . PASS END=28607313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:29:0,69,1035:0,87,255:26,0 chr1 28657174 . A . PASS END=28657179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 28657180 . G . PASS END=28657180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 28657181 . C . PASS END=28657213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,86,255:32,0 chr1 28657214 . G . PASS END=28657214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 28657215 . C . PASS END=28657217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 28657218 . C . PASS END=28657218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 28657219 . A . PASS END=28657219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 28657220 . T . PASS END=28657225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 28657226 . T . PASS END=28657246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 28660928 . G . PASS END=28660947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,560:0,40,255:19,0 chr1 28660948 . T . PASS END=28660960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:26,0 chr1 28660961 . T . PASS END=28660964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 28660965 . C . PASS END=28660972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,893:0,65,255:27,0 chr1 28660973 . G . PASS END=28660976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 28660977 . T . PASS END=28660977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,836:0,70,255:28,0 chr1 28660978 . T . PASS END=28661001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1013:0,87,255:31,0 chr1 28661002 . A . PASS END=28661002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1013:0,76,255:28,0 chr1 28661003 . C . PASS END=28661005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 28661006 . T . PASS END=28661006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 28661007 . C . PASS END=28661019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 28661020 . A . PASS END=28661031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,978:0,70,255:26,0 chr1 28661032 . C . PASS END=28661032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28661033 . T . PASS END=28661084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,909:0,64,255:26,0 chr1 28661085 . C . PASS END=28661086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,855:0,75,255:19,0 chr1 28661087 . G . PASS END=28661127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:24,0 chr1 28661128 . G . PASS END=28661128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 28661129 . A . PASS END=28661129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 28661130 . A . PASS END=28661131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:21,0 chr1 28661132 . T . PASS END=28661143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr1 28661144 . A . PASS END=28661144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 28661145 . C . PASS END=28661153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr1 28661154 . C . PASS END=28661154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 28661155 . C . PASS END=28661157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 28661158 . G . PASS END=28661163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 28661164 . A . PASS END=28661164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 28661165 . A . PASS END=28661170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28661171 . T . PASS END=28661171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 28661172 . G . PASS END=28661173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 28661174 . A . PASS END=28661174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 28661175 . C . PASS END=28661203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1108:0,87,255:32,0 chr1 28661204 . T . PASS END=28661204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1015:0,63,255:29,0 chr1 28661205 . C . PASS END=28661234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1126:0,86,255:33,0 chr1 28661235 . T . PASS END=28661235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:26,0 chr1 28661236 . G . PASS END=28661240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:27,0 chr1 28661241 . T . PASS END=28661241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:25,0 chr1 28661242 . G . PASS END=28661244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 28661245 . G . PASS END=28661246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 28661247 . T . PASS END=28661247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28661248 . A . PASS END=28661248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28661249 . A . PASS END=28661249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 28661250 . G . PASS END=28661251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 28661252 . G . PASS END=28661261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 28661262 . C . PASS END=28661265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 28661266 . A . PASS END=28661266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 28661267 . A . PASS END=28661313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1056:0,87,255:31,0 chr1 28661314 . C . PASS END=28661314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 28661315 . C . PASS END=28661345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1125:0,90,255:31,0 chr1 28661346 . A . PASS END=28661346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 28661347 . C . PASS END=28661357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:30,0 chr1 28661358 . C . PASS END=28661358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 28661359 . G . PASS END=28661365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:30:0,85,1158:0,85,255:32,0 chr1 28661366 . T . PASS END=28661366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 28661367 . A . PASS END=28661453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1180:0,85,255:36,0 chr1 28661454 . G . PASS END=28661469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 28661470 . A . PASS END=28661471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 28661472 . G . PASS END=28661476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 28661477 . T . PASS END=28661477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 28661478 . G . PASS END=28661481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 28733959 . A . PASS END=28733974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,167,255:40,0 chr1 28764896 . A . PASS END=28764941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,118,1800:0,118,255:40,0 chr1 28784343 . A . PASS END=28784370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,174,255:40,0 chr1 28785596 . A . PASS END=28785598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 28785599 . A . PASS END=28785603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 28785604 . G . PASS END=28785610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1260:0,81,255:36,0 chr1 28785611 . C . PASS END=28785613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 28785614 . C . PASS END=28785619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:42:0,87,1474:0,87,255:40,0 chr1 28785620 . A . PASS END=28785620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:40,0 chr1 28785621 . G . PASS END=28785728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:80:44:0,80,1529:0,80,255:40,1 chr1 28785729 . G . PASS END=28785729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,7:77:12:77:0,12,2358:0,12,255:40,8 chr1 28785730 . A . LowGQ END=28785730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,7:77:0:77:0,0,2307:16,0,255:40,6 chr1 28785731 . A . PASS END=28785731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,5:76:43:76:0,43,2482:0,43,255:40,0 chr1 28785732 . A . PASS END=28785769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,159,255:40,0 chr1 28786723 . T . PASS END=28786803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,192,255:40,0 chr1 28792196 . G . PASS END=28792204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,941:0,78,255:26,0 chr1 28792205 . A . PASS END=28792213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 28792214 . A . PASS END=28792225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 28792226 . C . PASS END=28792227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28792228 . A . PASS END=28792229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 28792230 . G . PASS END=28792236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1210:0,86,255:33,0 chr1 28792237 . A . PASS END=28792237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:31,0 chr1 28792238 . A . PASS END=28792272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1211:0,84,255:40,0 chr1 28792273 . T . PASS END=28792273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1330:0,73,255:39,0 chr1 28792274 . C . PASS END=28792274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:35:43:0,35,1337:0,35,255:38,0 chr1 28792275 . T . PASS END=28792295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:41:0,90,1403:0,90,255:40,0 chr1 28792296 . A . PASS END=28792296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1388:0,68,255:31,0 chr1 28792297 . G . PASS END=28792303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1227:0,91,255:33,0 chr1 28792304 . T . PASS END=28792304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:30,0 chr1 28792305 . A . PASS END=28792322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1018:0,85,255:33,0 chr1 28792323 . G . PASS END=28792323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1065:0,49,255:31,0 chr1 28792324 . A . PASS END=28792327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:33,0 chr1 28792328 . C . PASS END=28792329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:69:34:0,69,1042:0,69,255:31,0 chr1 28792330 . A . PASS END=28792333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,101,255:32,0 chr1 28792334 . C . PASS END=28792334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1078:0,55,255:28,0 chr1 28792335 . A . PASS END=28792335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1174:0,88,255:30,0 chr1 28792336 . G . PASS END=28792336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1030:0,57,255:29,0 chr1 28792337 . A . PASS END=28792344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1057:0,82,255:31,0 chr1 28792345 . C . PASS END=28792345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,875:0,49,255:27,0 chr1 28792346 . T . PASS END=28792346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1117:0,68,255:29,0 chr1 28792347 . A . PASS END=28792349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,990:0,82,255:30,0 chr1 28792350 . G . PASS END=28792350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:64:33:0,64,760:0,64,255:28,0 chr1 28792351 . A . PASS END=28792351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:30,0 chr1 28792352 . A . PASS END=28792352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,892:0,76,255:29,0 chr1 28792353 . A . PASS END=28792358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1155:0,90,255:30,0 chr1 28792359 . A . PASS END=28792360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 28792893 . G . PASS END=28793003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:28:0,83,1041:0,83,255:40,0 chr1 28793004 . A . PASS END=28793040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:41:0,93,1449:0,93,255:40,0 chr1 28793041 . G A, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.432;ReadPosRankSum=1.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,25,0:0.595,0.000:42:11,11,0:6,14,0:46:85,0,45,185,185,185:255,0,255:14,0:5.0000e+01,1.2011e-04,4.7529e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,11,10,15:6,11,14,11 chr1 28793042 . G . PASS END=28793078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:40:0,85,1372:0,85,255:40,0 chr1 28793079 . C . PASS END=28793143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,84,255:40,0 chr1 28793144 . G . PASS END=28793167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr1 28793168 . C . PASS END=28793168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 28793169 . C . PASS END=28793175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 28793176 . C . PASS END=28793180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 28793181 . A . PASS END=28793184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28793185 . T . PASS END=28793203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 28793204 . A . PASS END=28793204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 28793205 . C . PASS END=28793205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 28793206 . T . PASS END=28793206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 28793207 . C . PASS END=28793221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,44,255:15,0 chr1 28793222 . A . PASS END=28793222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 28793223 . A . PASS END=28793223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 28793224 . G . PASS END=28793224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 28793225 . C . PASS END=28793226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 28793227 . G . PASS END=28793232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 28793233 . T . PASS END=28793233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,394:0,9,255:10,0 chr1 28793234 . A . PASS END=28793238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 28793239 . T . PASS END=28793239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 28793240 . C . PASS END=28793253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:11,0 chr1 28793254 . T . PASS END=28793254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 28793255 . C . PASS END=28793258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 28793259 . G . PASS END=28793259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 28793260 . A . PASS END=28793262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 28793263 . T . PASS END=28793263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,295:0,16,255:10,0 chr1 28793264 . A . PASS END=28793271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 28793272 . T . PASS END=28793273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 28793274 . T . PASS END=28793277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 28793278 . T . PASS END=28793278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 28793279 . G . PASS END=28793279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 28800066 . C . PASS END=28800069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 28800070 . A . PASS END=28800070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 28800071 . C . PASS END=28800079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 28800080 . G . PASS END=28800091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:26,0 chr1 28800092 . G . PASS END=28800105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1025:0,81,255:31,0 chr1 28800106 . A . PASS END=28800106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 28800107 . A . PASS END=28800239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:31:0,93,1157:0,93,255:40,0 chr1 28800240 . A . PASS END=28800276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,105,1575:0,126,255:40,0 chr1 28800277 . C A, 49.60 PASS DP=47;MQ=249.53;MQRankSum=5.852;ReadPosRankSum=3.123;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,22,0:0.468,0.000:47:10,9,0:15,13,0:48:84,0,50,753,877,1630:255,0,255:18,0:4.9603e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,18,8,14:18,7,11,11 chr1 28800278 . C . PASS END=28800296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:40:0,87,1305:0,104,255:40,0 chr1 28800297 . C . PASS END=28800297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:29,0 chr1 28800298 . T . PASS END=28800311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,89,255:31,0 chr1 28800312 . G . PASS END=28800312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:28,0 chr1 28800313 . C . PASS END=28800314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr1 28800315 . C . PASS END=28800341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:33:0,87,1267:0,99,255:36,0 chr1 28800342 . A . PASS END=28800342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1209:0,61,255:34,0 chr1 28800343 . A . PASS END=28800344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1252:0,94,255:37,0 chr1 28800345 . T . PASS END=28800345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1231:0,56,255:35,0 chr1 28800346 . T . PASS END=28800369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1281:0,81,255:37,0 chr1 28800370 . A . PASS END=28800370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:29,0 chr1 28800371 . T . PASS END=28800379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,95,255:31,0 chr1 28800380 . C A, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.509;ReadPosRankSum=1.466;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,23,0:0.548,0.000:42:5,14,0:14,9,0:48:85,0,49,807,676,1484:255,0,255:14,0:5.0000e+01,6.9375e-05,5.2232e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,8,15:11,8,13,10 chr1 28800381 . T . PASS END=28800396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,111,255:36,0 chr1 28800397 . C . PASS END=28800397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr1 28800398 . C . PASS END=28800417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1243:0,91,255:37,0 chr1 28800418 . G . PASS END=28800436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:34:0,94,1252:0,94,255:38,0 chr1 28800437 . C . PASS END=28800437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr1 28800438 . T . PASS END=28800623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,99,1435:0,113,255:40,0 chr1 28800624 . G . PASS END=28800624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1474:0,52,255:34,0 chr1 28800625 . G . PASS END=28800644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,105,255:36,0 chr1 28800645 . C . PASS END=28800648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 28800649 . T . PASS END=28800651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 28800652 . A . PASS END=28800663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,77,255:26,0 chr1 28802619 . T . PASS END=28802620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 28802621 . C . PASS END=28802622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,0 chr1 28802623 . G . PASS END=28802624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 28802625 . C . PASS END=28802625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 28802626 . G . PASS END=28802626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:30,0 chr1 28802627 . A . PASS END=28802627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1041:0,41,255:29,0 chr1 28802628 . T . PASS END=28802633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1127:0,82,255:32,0 chr1 28802634 . A . PASS END=28802634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1102:0,52,255:30,0 chr1 28802635 . G . PASS END=28802637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1241:0,89,255:34,0 chr1 28802638 . G . PASS END=28802638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:32,0 chr1 28802639 . A . PASS END=28802639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1079:0,50,255:30,0 chr1 28802640 . G . PASS END=28802640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 28802641 . G . PASS END=28802642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 28802643 . G . PASS END=28802643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:32,0 chr1 28802644 . C . PASS END=28802644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1155:0,58,255:31,0 chr1 28802645 . A . PASS END=28802648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1137:0,94,255:35,0 chr1 28802649 . C . PASS END=28802649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1155:0,44,255:32,0 chr1 28802650 . T . PASS END=28802664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:85:37:0,85,1305:0,85,255:40,0 chr1 28802665 . A . PASS END=28802665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1209:0,57,255:35,0 chr1 28802666 . G . PASS END=28802673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1340:0,106,255:40,0 chr1 28802674 . A . PASS END=28802674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1295:0,73,255:35,0 chr1 28802675 . T . PASS END=28802689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1397:0,90,255:40,0 chr1 28802690 . T . PASS END=28802690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1404:0,79,255:39,0 chr1 28802691 . C . PASS END=28802719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:41:0,90,1255:0,90,255:40,0 chr1 28802720 . A . PASS END=28802720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:37:44:0,37,1224:0,37,255:40,0 chr1 28802721 . G . PASS END=28802721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1574:0,116,255:40,0 chr1 28802722 . G . PASS END=28802722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:32:44:0,32,1166:0,32,255:38,0 chr1 28802723 . A . PASS END=28802724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1422:0,99,255:40,0 chr1 28802725 . G . PASS END=28802725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:51:44:0,51,1216:0,51,255:39,0 chr1 28802726 . A . PASS END=28802731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:44:0,98,1350:0,98,255:40,0 chr1 28802732 . A . PASS END=28802732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1265:0,71,255:39,0 chr1 28802733 . G . PASS END=28802773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1260:0,91,255:40,0 chr1 28802774 . A . PASS END=28802774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:27,0 chr1 28802775 . T . PASS END=28802781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 28802782 . G . PASS END=28802782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 28802783 . A . PASS END=28802785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 28802786 . A . PASS END=28802786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 28802787 . A . PASS END=28802791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,83,255:28,0 chr1 28802792 . A . PASS END=28802799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,820:0,67,255:25,0 chr1 28802800 . C . PASS END=28802802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:19,0 chr1 28802803 . A . PASS END=28802803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 28806963 . G . PASS END=28807116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:38:0,90,1265:0,97,255:40,0 chr1 28815682 . G . PASS END=28815737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:65:0,120,1800:0,155,255:40,0 chr1 28817463 . C . PASS END=28817524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,114,1710:0,114,255:40,0 chr1 28818162 . C . PASS END=28818188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:29:0,87,1049:0,87,255:36,0 chr1 28818189 . C . PASS END=28818275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:39:0,81,1215:0,107,255:40,0 chr1 28818276 . A . PASS END=28818296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,78,255:26,0 chr1 28818297 . A . PASS END=28818299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 28819527 . G . PASS END=28819603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,164,255:40,0 chr1 28821386 . A . PASS END=28821428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,150,255:40,0 chr1 28823046 . C . PASS END=28823061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:44:0,96,1623:0,96,255:40,0 chr1 28845173 . A . PASS END=28845175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 28845176 . G . PASS END=28845200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,471:0,42,255:16,0 chr1 28845201 . T . PASS END=28845201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 28845202 . T . PASS END=28845202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 28845203 . G . PASS END=28845203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 28845204 . T . PASS END=28845205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,558:0,48,255:16,0 chr1 28845206 . C . PASS END=28845207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 28845208 . G . PASS END=28845211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 28845212 . G . PASS END=28845212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 28845213 . C . PASS END=28845215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 28845216 . T . PASS END=28845216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 28845217 . T . PASS END=28845223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 28845224 . G . PASS END=28845224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 28845225 . G . PASS END=28845225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 28845226 . C . PASS END=28845226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr1 28845227 . G . PASS END=28845227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 28845228 . G . PASS END=28845228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:15,0 chr1 28845229 . T . PASS END=28845230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 28845231 . T . PASS END=28845233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:18,0 chr1 28845234 . A . PASS END=28845234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 28845235 . G . PASS END=28845235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 28845236 . A . PASS END=28845236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 28845237 . T . PASS END=28845252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:19,0 chr1 28845253 . G . PASS END=28845255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 28845256 . C . PASS END=28845257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 28845258 . G . PASS END=28845259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 28845260 . A . PASS END=28845260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 28845261 . G . PASS END=28845273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 28845274 . A . PASS END=28845277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,767:0,50,255:19,0 chr1 28845278 . G . PASS END=28845284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28845285 . G . PASS END=28845285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 28845286 . G . PASS END=28845310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:20,0 chr1 28845311 . C . PASS END=28845334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,676:0,44,255:19,0 chr1 28845335 . G . PASS END=28845338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28845339 . A . PASS END=28845339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 28845340 . G . PASS END=28845346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 28845347 . A . PASS END=28845347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 28845348 . G . PASS END=28845349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28845350 . A . PASS END=28845350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 28845351 . G . PASS END=28845351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28845352 . A . PASS END=28845352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 28845353 . T . PASS END=28845364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:22,0 chr1 28845365 . C . PASS END=28845372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,754:0,52,255:19,0 chr1 28845373 . G . PASS END=28845373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 28845374 . C . PASS END=28845426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 28845427 . A . PASS END=28845427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 28845428 . T . PASS END=28845469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 28856370 . G . PASS END=28856450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:39:0,86,1382:0,86,255:40,0 chr1 28856451 . G . PASS END=28856451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:57:47:0,57,1240:0,57,255:37,0 chr1 28857035 . A . PASS END=28857126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:18,0 chr1 28857127 . G . PASS END=28857127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 28858315 . T . PASS END=28858356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:19,0 chr1 28858357 . C . PASS END=28858374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:23,0 chr1 28858375 . T . PASS END=28858375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:19,0 chr1 28858376 . G . PASS END=28858379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 28858380 . C . PASS END=28858380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 28858381 . A . PASS END=28858395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,67,255:26,0 chr1 28858396 . A . PASS END=28858402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr1 28858403 . G . PASS END=28858403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 28858404 . A . PASS END=28858409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1001:0,84,255:28,0 chr1 28858410 . A . PASS END=28858411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,974:0,68,255:26,0 chr1 28858412 . G . PASS END=28858417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28858418 . G . PASS END=28858418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 28858419 . C . PASS END=28858428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:29,0 chr1 28858429 . T . PASS END=28858429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:28,0 chr1 28858430 . A . PASS END=28858433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 28858434 . A . PASS END=28858434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:29,0 chr1 28858435 . T . PASS END=28858450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1078:0,90,255:30,0 chr1 28858451 . G . PASS END=28858451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 28858452 . C . PASS END=28858456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 28858457 . T . PASS END=28858471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1000:0,77,255:26,0 chr1 28858472 . G . PASS END=28858475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 28858476 . A . PASS END=28858476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 28858477 . C . PASS END=28858477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 28858478 . C . PASS END=28858478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 28858479 . G . PASS END=28858484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,946:0,81,255:27,0 chr1 28858485 . C . PASS END=28858489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 28858490 . C . PASS END=28858500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 28858501 . A . PASS END=28858501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 28858502 . G . PASS END=28858502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28858683 . G . PASS END=28858852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1125:0,80,255:40,0 chr1 28858853 . C . PASS END=28858862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 28859186 . C . PASS END=28859190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 28859191 . C . PASS END=28859191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 28859192 . C . PASS END=28859207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr1 28859208 . A . PASS END=28859210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 28859211 . G . PASS END=28859215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28859216 . G . PASS END=28859216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 28859217 . G . PASS END=28859218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 28859219 . T . PASS END=28859220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 28859221 . G . PASS END=28859252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 28859253 . A . PASS END=28859266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 28859267 . A . PASS END=28859269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:26:0,45,675:0,78,255:15,0 chr1 28861562 . G . PASS END=28861658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:35:0,98,1365:0,98,255:40,0 chr1 28861770 . G . PASS END=28861883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1099:0,83,255:40,0 chr1 28861884 . A . PASS END=28861885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 28861886 . G . PASS END=28861886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 28861887 . G . PASS END=28861892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1116:0,77,255:26,0 chr1 28862383 . A . PASS END=28862383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 28862384 . A . PASS END=28862393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,876:0,69,255:25,0 chr1 28862394 . G . PASS END=28862406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1019:0,84,255:30,0 chr1 28862407 . T . PASS END=28862408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 28862409 . A . PASS END=28862443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1224:0,83,255:35,0 chr1 28862444 . A . PASS END=28862444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1037:0,63,255:32,0 chr1 28862445 . T . PASS END=28862496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1186:0,83,255:34,0 chr1 28862497 . G . PASS END=28862499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:22,0 chr1 28862500 . A . PASS END=28862503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,74,255:19,0 chr1 28862504 . G . PASS END=28862507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 28862508 . G . PASS END=28862508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 28862509 . G . PASS END=28862513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 28862514 . G . PASS END=28862514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 28862515 . G . PASS END=28862515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28862516 . C . PASS END=28862520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,652:0,46,255:20,0 chr1 28862521 . C . PASS END=28862521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:18,0 chr1 28862522 . C . PASS END=28862538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:18,0 chr1 28862774 . G . PASS END=28862792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1033:0,87,255:31,0 chr1 28862793 . T . PASS END=28862793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 28862794 . T . PASS END=28862861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1118:0,81,255:36,0 chr1 28862862 . C . PASS END=28862893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,744:0,63,255:24,0 chr1 28863259 . G . PASS END=28863270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:16:0,48,568:0,48,255:19,0 chr1 28863271 . G . PASS END=28863295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:26,0 chr1 28863296 . G . PASS END=28863327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:30,0 chr1 28863328 . G . PASS END=28863328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:27,0 chr1 28863329 . C . PASS END=28863339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1072:0,80,255:29,0 chr1 28863340 . T . PASS END=28863340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28863341 . C . PASS END=28863342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28863343 . T . PASS END=28863343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 28863344 . C . PASS END=28863346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 28863347 . C . PASS END=28863381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,870:0,61,255:26,0 chr1 28863382 . C . PASS END=28863386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:23:0,41,765:0,41,255:19,0 chr1 28863387 . G . PASS END=28863391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:23:0,39,585:0,69,255:13,0 chr1 28863392 . G . PASS END=28863403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:15,0 chr1 28863404 . C . PASS END=28863407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 28863408 . G . PASS END=28863408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 28863409 . A . PASS END=28863411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 28864344 . G . PASS END=28864359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,955:0,75,255:26,0 chr1 28864360 . G . PASS END=28864360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 28864361 . G . PASS END=28864361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 28864362 . G . PASS END=28864382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1103:0,80,255:32,0 chr1 28864383 . T . PASS END=28864383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,0 chr1 28864384 . G . PASS END=28864397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1202:0,83,255:34,0 chr1 28864398 . A . PASS END=28864430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:36:0,98,1349:0,98,255:38,0 chr1 28864431 . G . PASS END=28864431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr1 28864432 . C . PASS END=28864434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1457:0,101,255:38,0 chr1 28864435 . A G, 46.62 PASS DP=38;MQ=249.84;MQRankSum=5.137;ReadPosRankSum=3.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,15,0:0.395,0.000:38:13,7,0:10,8,0:46:81,0,50,536,749,1285:255,0,255:23,0:4.6625e+01,1.1623e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,16,4,11:15,8,10,5 chr1 28864436 . C . PASS END=28864472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1305:0,93,255:36,0 chr1 28864473 . G . PASS END=28864478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr1 28864479 . A . PASS END=28864503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,60,255:25,0 chr1 28864504 . C . PASS END=28864504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 28864505 . A . PASS END=28864505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28864506 . A . PASS END=28864507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 28864508 . G . PASS END=28864510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 28864511 . C . PASS END=28864519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 28879623 . A . PASS END=28879639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 28879640 . G . PASS END=28879640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 28879641 . A . PASS END=28879649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:18,0 chr1 28880152 . C . PASS END=28880249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,113,1559:0,113,255:40,0 chr1 28887145 . G . PASS END=28887233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,113,1513:0,113,255:40,0 chr1 28887234 . G . PASS END=28887234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1567:0,66,255:40,0 chr1 28887235 . A . PASS END=28887244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,114,1710:0,123,255:40,0 chr1 28887858 . G . PASS END=28887910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,143,255:40,0 chr1 28891215 . C . PASS END=28891222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,803:0,62,255:25,0 chr1 28891223 . A . PASS END=28891226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 28891227 . C . PASS END=28891229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 28891230 . C . PASS END=28891240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 28891241 . A . PASS END=28891241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:30,0 chr1 28891242 . C . PASS END=28891346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:32:0,81,1202:0,81,255:40,0 chr1 28893806 . G . PASS END=28893914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,91,255:40,0 chr1 28893915 . A . PASS END=28893925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 28897688 . G . PASS END=28897688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 28897689 . A . PASS END=28897701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1249:0,89,255:34,0 chr1 28897702 . C . PASS END=28897703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:32,0 chr1 28897704 . G . PASS END=28897847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:29:0,81,1215:0,87,255:40,0 chr1 28897848 . C . PASS END=28897850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 28898379 . A . PASS END=28898412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,153,255:40,0 chr1 28904012 . A . PASS END=28904126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:37:0,87,1305:0,103,255:40,0 chr1 28904127 . A . PASS END=28904127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1115:0,45,255:25,0 chr1 28904128 . G . PASS END=28904136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 28904137 . G . PASS END=28904137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 28904138 . C . PASS END=28904139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 28904140 . A . PASS END=28904145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 28904146 . T . PASS END=28904148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 28919024 . A . PASS END=28919075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,164:6,0 chr1 28919076 . C . PASS END=28919101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr1 28919102 . C . PASS END=28919108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 28919109 . A . PASS END=28919109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 28919110 . C . PASS END=28919171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr1 28919172 . A . PASS END=28919172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 28919173 . G . PASS END=28919175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr1 28919176 . C . PASS END=28919176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 28919177 . T . PASS END=28919182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:4,0 chr1 28919183 . C . PASS END=28919198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 28919199 . G . PASS END=28919209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 28919210 . C . PASS END=28919211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 28919212 . G . PASS END=28919217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:5,0 chr1 28919218 . G . PASS END=28919218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 28919219 . C . PASS END=28919262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 28920206 . G . PASS END=28920206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 28920207 . T . PASS END=28920212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 28920213 . A . PASS END=28920245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,61,255:26,0 chr1 28920246 . C . PASS END=28920248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 28920249 . C . PASS END=28920249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 28920250 . T . PASS END=28920256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 28920257 . T . PASS END=28920257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr1 28920258 . G . PASS END=28920261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 28920262 . T . PASS END=28920262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:27,0 chr1 28920263 . G . PASS END=28920265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 28920266 . A . PASS END=28920266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 28920267 . A . PASS END=28920267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 28920268 . A . PASS END=28920273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:25,0 chr1 28920274 . A . PASS END=28920274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:24,0 chr1 28920275 . G . PASS END=28920278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,941:0,67,255:26,0 chr1 28920279 . T . PASS END=28920279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:23,0 chr1 28920280 . T . PASS END=28920291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,892:0,61,255:23,0 chr1 28920292 . A . PASS END=28920292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,906:0,26,255:20,0 chr1 28920293 . A . PASS END=28920296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:22,0 chr1 28920297 . T . PASS END=28920297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 28920298 . G . PASS END=28920303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,906:0,72,255:24,0 chr1 28920304 . A . PASS END=28920304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 28920305 . G . PASS END=28920320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 28920321 . C . PASS END=28920321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 28920322 . A . PASS END=28920332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 28920333 . A . PASS END=28920333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,780:0,39,255:21,0 chr1 28920334 . A . PASS END=28920372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 28920373 . A . PASS END=28920373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,739:0,30,255:20,0 chr1 28920374 . G . PASS END=28920384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 28920385 . G . PASS END=28920392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:19,0 chr1 28920393 . G . PASS END=28920396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 28920397 . A . PASS END=28920397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 28920398 . G . PASS END=28920399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 28920400 . A . PASS END=28920400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 28920401 . G . PASS END=28920405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,782:0,63,255:23,0 chr1 28920406 . A . PASS END=28920406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 28920407 . G . PASS END=28920411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 28920412 . T . PASS END=28920412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 28920413 . A . LowGQ END=28920413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,692:1,0,255:21,0 chr1 28920414 . G . PASS END=28920421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 28920422 . C . PASS END=28920431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr1 28920432 . G . PASS END=28920441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:21,0 chr1 28920442 . A . PASS END=28920442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 28920443 . G . PASS END=28920443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 28920444 . A . PASS END=28920444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,568:0,30,255:19,0 chr1 28920445 . C . PASS END=28920446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 28920447 . T . PASS END=28920447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 28920448 . C . PASS END=28920449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 28920450 . G . PASS END=28920451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 28920452 . T . PASS END=28920452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:18,0 chr1 28920453 . A . PASS END=28920455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 28920456 . A . PASS END=28920456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:18,0 chr1 28920457 . A . PASS END=28920458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,753:0,49,255:19,0 chr1 28920459 . A . PASS END=28920459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 28920460 . A . PASS END=28920460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 28920461 . C . PASS END=28920465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 28920466 . A . PASS END=28920467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:21,0 chr1 28920468 . G . PASS END=28920471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr1 28920472 . A . PASS END=28920472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:22,0 chr1 28920473 . C . PASS END=28920474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 28920475 . T . PASS END=28920475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 28920476 . G . PASS END=28920479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 28920480 . T . PASS END=28920480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr1 28920481 . T . PASS END=28920481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,772:0,36,255:23,0 chr1 28920482 . T . PASS END=28920482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:22,0 chr1 28920483 . G . PASS END=28920489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,862:0,72,255:24,0 chr1 28920490 . T . PASS END=28920490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 28920491 . C . PASS END=28920498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:24,0 chr1 28920499 . C . PASS END=28920503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:25:0,44,855:0,44,255:19,0 chr1 28920504 . C . PASS END=28920510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 28920511 . C . PASS END=28920519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr1 28920520 . A . PASS END=28920520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:17,0 chr1 28920521 . G . PASS END=28920526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr1 28920527 . C . PASS END=28920528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28920529 . T . PASS END=28920529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 28920530 . C . PASS END=28920531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 28920532 . A . PASS END=28920532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 28920533 . G . PASS END=28920534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 28920535 . T . PASS END=28920536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 28920537 . G . PASS END=28920538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 28920539 . A . PASS END=28920543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,756:0,55,255:19,0 chr1 28920544 . G . PASS END=28920545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 28920546 . T . PASS END=28920546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:20,2 chr1 28920547 . G . LowGQ END=28920547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,684:11,0,255:20,2 chr1 28920548 . G . PASS END=28920548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:22,0 chr1 28920549 . G . PASS END=28920551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 28920552 . G . PASS END=28920553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:52:23:0,52,792:0,52,255:23,0 chr1 28920554 . T . PASS END=28920576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,846:0,72,255:25,0 chr1 28920577 . A . PASS END=28920577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 28920578 . A . PASS END=28920607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,856:0,72,255:24,0 chr1 28920608 . C . PASS END=28920629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,621:0,51,255:19,0 chr1 28930051 . T . PASS END=28930086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:71:0,120,1800:0,142,255:40,0 chr1 28931884 . C . PASS END=28931886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:40,0 chr1 28931887 . T . PASS END=28931887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1230:0,79,255:39,0 chr1 28931888 . T . PASS END=28931972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,99,1485:0,99,255:40,0 chr1 28939759 . C . PASS END=28939766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:29,0 chr1 28939767 . A . PASS END=28939767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 28939768 . G . PASS END=28939769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 28939770 . T . PASS END=28939770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 28939771 . G . PASS END=28939772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr1 28939773 . A . PASS END=28939773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 28939774 . C . PASS END=28939779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 28939780 . T . PASS END=28939780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 28939781 . C . PASS END=28939835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1202:0,83,255:37,0 chr1 28939836 . A . PASS END=28939836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:32,0 chr1 28939837 . C . PASS END=28939853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 28939854 . T . PASS END=28939873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:25,0 chr1 28944465 . C . PASS END=28944495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1213:0,91,255:37,0 chr1 28944496 . G . PASS END=28944496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 28944497 . G . PASS END=28944537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1112:0,92,255:36,0 chr1 28944538 . A . PASS END=28944542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 28948426 . C . PASS END=28948433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 28948434 . T . PASS END=28948435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,768:0,52,255:23,0 chr1 28948436 . T . PASS END=28948438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 28948439 . G . PASS END=28948677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,1002:0,84,255:40,0 chr1 28950458 . A . PASS END=28950529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,108,1566:0,113,255:40,0 chr1 28974717 . A . PASS END=28974717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 28974718 . G . PASS END=28974721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 28974722 . C . PASS END=28974726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 28974727 . A . PASS END=28974727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,820:0,48,255:24,0 chr1 28974728 . G . PASS END=28974734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 28974735 . T . PASS END=28974779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:31,0 chr1 28974780 . A . PASS END=28974827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 28974828 . C . PASS END=28974828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:25,0 chr1 28974829 . G . PASS END=28974855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 28974856 . G . PASS END=28974871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:19,0 chr1 28974872 . T . PASS END=28974872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 29010125 . A . PASS END=29010137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,553:0,45,255:16,0 chr1 29010138 . A . PASS END=29010138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 29010139 . A . PASS END=29010154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,590:0,40,255:19,0 chr1 29010155 . G . PASS END=29010161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,754:0,60,255:21,0 chr1 29010162 . T . PASS END=29010162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 29010163 . G . PASS END=29010182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:26,0 chr1 29010183 . G . PASS END=29010187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 29010188 . G . PASS END=29010188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 29010189 . A . PASS END=29010193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 29010194 . G . PASS END=29010200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29010201 . C . PASS END=29010201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29010202 . T . PASS END=29010233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,793:0,65,255:26,0 chr1 29010234 . T . PASS END=29010234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 29010235 . A . PASS END=29010237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 29010238 . G . PASS END=29010249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,43,255:19,0 chr1 29010250 . A . PASS END=29010252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 29016586 . T . PASS END=29016665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:39:0,107,1443:0,107,255:40,1 chr1 29016666 . C . PASS END=29016671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:92:48:0,92,1652:0,92,255:40,0 chr1 29016672 . C . PASS END=29016673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:69:49:0,69,1558:0,69,255:40,0 chr1 29016674 . A . PASS END=29016674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr1 29016675 . T . PASS END=29016675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:20:49:0,20,1494:0,20,255:36,0 chr1 29016676 . A . PASS END=29016676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,108,1738:0,108,255:39,0 chr1 29016677 . C . PASS END=29016677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:22:49:0,22,1529:0,22,255:38,0 chr1 29016678 . A . PASS END=29016678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 29016679 . C . PASS END=29016679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:33:48:0,33,1474:0,33,255:33,0 chr1 29016680 . A . PASS END=29016688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:46:0,83,1305:0,83,255:36,0 chr1 29016689 . G . PASS END=29016691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1406:0,74,255:27,0 chr1 29016692 . G . PASS END=29016692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:35:46:0,35,1354:0,35,255:24,0 chr1 29016693 . G . PASS END=29016693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1523:0,61,255:24,0 chr1 29016694 . G . PASS END=29016695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:49:46:0,49,1317:0,49,255:23,0 chr1 29016696 . T . PASS END=29016697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1035:0,66,255:21,0 chr1 29016698 . G . PASS END=29016698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:54:46:0,54,1222:0,54,255:19,0 chr1 29018097 . A . PASS END=29018189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,889:0,81,255:40,0 chr1 29018190 . T . PASS END=29018190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1609:0,67,255:40,0 chr1 29018191 . A . PASS END=29018207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:43:0,86,1365:0,86,255:40,0 chr1 29018208 . T . PASS END=29018208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:35,0 chr1 29018209 . G . PASS END=29018209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1507:0,90,255:33,0 chr1 29018210 . A . PASS END=29018210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:32,0 chr1 29018211 . A . PASS END=29018211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1440:0,129,255:32,0 chr1 29018212 . G . PASS END=29018212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1435:0,74,255:31,0 chr1 29018213 . T . PASS END=29018213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1217:0,53,255:30,0 chr1 29018214 . G . PASS END=29018214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:32,0 chr1 29018215 . T . PASS END=29018215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 29018216 . G . PASS END=29018216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 29018217 . T . PASS END=29018221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:32,0 chr1 29019454 . T . PASS END=29019557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:91:37:0,91,1378:0,91,255:40,0 chr1 29023439 . G . PASS END=29023603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:38:0,84,1260:0,104,255:40,0 chr1 29028950 . G . PASS END=29028960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1133:0,83,255:33,0 chr1 29028961 . C . PASS END=29028961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 29028962 . A . PASS END=29028975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1197:0,83,255:35,0 chr1 29028976 . G . PASS END=29028976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr1 29028977 . A . PASS END=29028979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:37,0 chr1 29028980 . A . PASS END=29028980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 29028981 . G . PASS END=29028993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1357:0,95,255:40,0 chr1 29028994 . G . PASS END=29028994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1402:0,65,255:37,0 chr1 29028995 . C . PASS END=29029052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,89,255:40,0 chr1 29029053 . T . PASS END=29029053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:27,0 chr1 29029054 . G . PASS END=29029056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 29029057 . A . PASS END=29029068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:23,0 chr1 29029069 . G . PASS END=29029081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 29030704 . A . PASS END=29030709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 29030710 . C . PASS END=29030710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 29030711 . T . PASS END=29030717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:23,0 chr1 29030718 . T . PASS END=29030719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 29030720 . C . PASS END=29030727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 29030728 . G . PASS END=29030734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:29,0 chr1 29030735 . T . PASS END=29030735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 29030736 . G . PASS END=29030832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1088:0,83,255:40,0 chr1 29030833 . A . PASS END=29030833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 29030834 . A . PASS END=29030835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 29030836 . T . PASS END=29030841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 29037032 . A . PASS END=29037154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:44:0,87,1305:0,108,255:40,0 chr1 29040585 . A . PASS END=29040609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:19,0 chr1 29040610 . G . PASS END=29040638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,784:0,66,255:24,0 chr1 29040639 . A . PASS END=29040639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 29040640 . A . PASS END=29040867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,965:0,84,255:40,0 chr1 29040868 . T . PASS END=29040896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 29040897 . T . PASS END=29040897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:22,0 chr1 29040898 . C . PASS END=29040901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 29040902 . C . PASS END=29040902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:23,0 chr1 29040903 . G . PASS END=29040936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,970:0,67,255:26,0 chr1 29040937 . C . PASS END=29040937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29040938 . T . PASS END=29040938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr1 29040939 . C . PASS END=29040942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 29040943 . A . PASS END=29040944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 29040945 . A . PASS END=29040948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 29040949 . A . PASS END=29040949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 29040950 . G . PASS END=29040950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 29040951 . T . PASS END=29040951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 29040952 . G . PASS END=29040971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 29040972 . G . PASS END=29040972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr1 29040973 . C . PASS END=29040976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,872:0,64,255:27,0 chr1 29040977 . G . PASS END=29040985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 29040986 . A . PASS END=29040987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 29040988 . C . PASS END=29041285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1066:0,82,255:40,0 chr1 29063633 . A . PASS END=29063635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29063636 . T . PASS END=29063644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 29063645 . A . PASS END=29063645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 29063646 . G . PASS END=29063650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 29063651 . T . PASS END=29063651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 29063652 . T . PASS END=29063654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 29063655 . A . PASS END=29063655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 29063656 . G . PASS END=29063659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 29064170 . A . PASS END=29064181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr1 29064182 . C . PASS END=29064185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29064186 . G . PASS END=29064191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 29064192 . A . PASS END=29064194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 29064771 . T . PASS END=29064850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:41:0,105,1575:0,112,255:40,0 chr1 29068915 . A . PASS END=29069240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:83:32:0,83,1164:0,83,255:40,0 chr1 29069241 . T . PASS END=29069241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:29,0 chr1 29069242 . G . PASS END=29069251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:31,0 chr1 29069252 . C . PASS END=29069252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:28,0 chr1 29069253 . T . PASS END=29069925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1247:0,86,255:40,0 chr1 29069926 . C . PASS END=29069926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:35,0 chr1 29069927 . C . PASS END=29069928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1465:0,82,255:37,0 chr1 29069929 . T . PASS END=29069929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr1 29069930 . C . PASS END=29069930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 29069931 . A . PASS END=29069933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1334:0,78,255:37,0 chr1 29069934 . A . PASS END=29070303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:43:0,91,1566:0,91,255:40,0 chr1 29070304 . A . PASS END=29070304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,6:54:40:54:0,40,1603:0,40,255:40,0 chr1 29070305 . G . PASS END=29070385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:43:0,91,1530:0,91,255:40,2 chr1 29070386 . A . PASS END=29070386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:46:44:0,46,1488:0,46,255:38,2 chr1 29070387 . A . PASS END=29070387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:38,0 chr1 29070388 . A . PASS END=29070498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:34:0,88,1199:0,88,255:40,0 chr1 29095441 . G . PASS END=29095464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,168,255:40,0 chr1 29138896 . A . PASS END=29138931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 29138932 . C . PASS END=29138933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 29138934 . C . PASS END=29138937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 29138938 . C . PASS END=29138974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 29138975 . G T, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,11,0:0,8,0:54:142,57,0,729,57,729:255,57,0:0,0:1.0418e+02,5.4182e+01,1.6567e-05,4.5000e+02,8.8952e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,7:0,0,10,9 chr1 29138976 . C . PASS END=29139012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 29139013 . G . PASS END=29139035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 29139036 . C . PASS END=29139036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 29139037 . C . PASS END=29139042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 29139043 . A . PASS END=29139043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 29139044 . T . PASS END=29139049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 29139050 . T . PASS END=29139050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 29139051 . C . PASS END=29139058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 29139059 . T . PASS END=29139059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr1 29139060 . C . PASS END=29139070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,637:0,43,255:17,0 chr1 29139071 . T . PASS END=29139071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:14,0 chr1 29139072 . G . PASS END=29139077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 29139078 . C . PASS END=29139078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 29139079 . G . PASS END=29139081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 29139082 . G . PASS END=29139082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 29139083 . G . PASS END=29139100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:15,0 chr1 29139101 . T . PASS END=29139102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 29139103 . G . PASS END=29139105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 29139106 . A . PASS END=29139106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:12,0 chr1 29139107 . T . PASS END=29139108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29139109 . T . PASS END=29139109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:10,0 chr1 29139110 . T . PASS END=29139122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 29139756 . G A, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.528;ReadPosRankSum=2.707;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,22,0:0.524,0.000:42:15,10,0:5,12,0:48:85,0,50,777,714,1491:255,0,255:20,0:5.0000e+01,6.6269e-05,5.2804e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,11,11:10,10,15,7 chr1 29145124 . G T, 48.14 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=2.434;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:12,8,0:16,13,0:47:83,0,50,698,1001,1699:255,0,255:28,0:4.8136e+01,8.8531e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,14,7:17,11,9,12 chr1 29145188 . C . PASS END=29145188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr1 29151183 . G . PASS END=29151183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 29161609 . T C, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.452;ReadPosRankSum=2.582;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,22,0:0.688,0.000:32:2,12,0:8,10,0:42:85,0,39,779,329,1108:255,0,247:10,0:5.0000e+01,2.8786e-04,4.2495e+01,4.5000e+02,3.6361e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,13,9:5,5,11,11 chr1 29161999 . C A, 50.00 PASS DP=28;MQ=249.86;MQRankSum=4.375;ReadPosRankSum=3.951;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,17,0:0.607,0.000:28:5,10,0:6,7,0:47:85,0,47,571,393,964:255,0,255:10,0:5.0000e+01,8.3612e-05,5.0346e+01,4.5000e+02,4.2797e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,4,13:6,5,11,6 chr1 29165837 . C G, 50.00 PASS DP=35;MQ=249.67;MQRankSum=4.933;ReadPosRankSum=1.397;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,21,0:0.600,0.000:35:10,8,0:4,13,0:47:85,0,47,707,500,1207:255,0,255:13,0:5.0000e+01,8.7495e-05,4.9945e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,9,12:7,7,10,11 chr1 29169559 . T C, 50.00 PASS DP=39;MQ=248.02;MQRankSum=4.721;ReadPosRankSum=0.102;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,20,0:0.526,0.000:38:13,13,0:5,7,0:48:85,0,50,683,640,1323:255,0,255:14,0:5.0000e+01,6.6010e-05,5.2820e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,7,13:9,9,10,10 chr1 29174946 . A . PASS END=29174946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 29175373 . A G, 48.11 PASS DP=27;MQ=250.00;MQRankSum=4.318;ReadPosRankSum=0.913;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,11,0:0.407,0.000:27:9,6,0:7,5,0:47:83,0,50,385,535,921:255,0,255:16,0:4.8114e+01,8.8790e-05,5.3000e+01,3.8545e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,12,6,5:7,9,5,6 chr1 29181525 . A G, 115.76 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,10,0:0,13,0:66:154,69,0,847,69,847:255,69,0:0,0:1.1576e+02,6.5756e+01,1.0354e-06,4.5000e+02,1.0053e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,11:0,0,13,10 chr1 29185466 . G . PASS END=29185478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr1 29185479 . A . PASS END=29185490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 29185491 . A . PASS END=29185492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,715:0,47,255:21,0 chr1 29185493 . C . PASS END=29185502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:23,0 chr1 29185503 . T . PASS END=29185503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 29185504 . T . PASS END=29185516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 29185517 . A . PASS END=29185518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,806:0,53,255:20,0 chr1 29185519 . C . PASS END=29185559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 29185560 . A . PASS END=29185573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:20:0,53,810:0,53,255:19,0 chr1 29185574 . G . PASS END=29185577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 29185578 . T . PASS END=29185599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:20:0,41,712:0,41,255:19,0 chr1 29185600 . G . PASS END=29185608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 29185609 . T . PASS END=29185609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 29185610 . G . PASS END=29185611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 29185612 . T . PASS END=29185621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 29185622 . C . PASS END=29185622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 29185623 . T . PASS END=29185623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 29185624 . A . PASS END=29185625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 29185626 . T . PASS END=29185626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 29185627 . A . PASS END=29185628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 29185629 . A . PASS END=29185652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,637:0,40,255:19,0 chr1 29185653 . C . PASS END=29185660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 29185661 . G . PASS END=29185661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 29185662 . A . PASS END=29185666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 29185667 . T . PASS END=29185667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:12,0 chr1 29185668 . G . PASS END=29185668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 29185669 . T . PASS END=29185669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr1 29185670 . T . PASS END=29185675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 29185676 . C . PASS END=29185684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:14,0 chr1 29185685 . T . PASS END=29185687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 29185688 . C . PASS END=29185712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 29185713 . T . PASS END=29185717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,566:0,34,255:13,0 chr1 29185718 . C . PASS END=29185748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,607:0,48,255:18,0 chr1 29185749 . T . PASS END=29185749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 29185750 . G . PASS END=29185750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 29185751 . T . PASS END=29185751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 29185752 . A . PASS END=29185770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:17,0 chr1 29185771 . G . PASS END=29185771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 29185772 . C . PASS END=29185787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 29185788 . A . PASS END=29185790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29185791 . G . PASS END=29185791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 29185792 . T . PASS END=29185793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 29185794 . A . PASS END=29185815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 29189254 . A . PASS END=29189256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 29189257 . G . PASS END=29189267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:32,0 chr1 29189268 . T . PASS END=29189268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:30,0 chr1 29189269 . G . PASS END=29189390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:31:0,81,1150:0,83,255:40,0 chr1 29189391 . C . PASS END=29189391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 29189392 . G . PASS END=29189392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 29189393 . C . PASS END=29189397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:24,0 chr1 29189398 . G . PASS END=29189409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:24:0,57,855:0,72,255:19,0 chr1 29189410 . T . PASS END=29189410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:19,0 chr1 29189411 . G . PASS END=29189413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr1 29189414 . G . PASS END=29189424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 29189425 . A . PASS END=29189435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 29189436 . C . PASS END=29189437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 29189438 . C . PASS END=29189438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 29189439 . A . PASS END=29189440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 29189441 . C . PASS END=29189449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:19,0 chr1 29189450 . C . PASS END=29189454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 29189455 . C . PASS END=29189512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,643:0,51,255:19,0 chr1 29189513 . C . PASS END=29189513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 29189514 . T . PASS END=29189521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 29189522 . C . PASS END=29189571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:23,0 chr1 29189572 . C . PASS END=29189572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 29189573 . G . PASS END=29189623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,868:0,61,255:25,0 chr1 29189624 . G . PASS END=29189625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 29189626 . T . PASS END=29189626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,922:0,37,255:25,0 chr1 29189627 . C . PASS END=29189642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 29189643 . G . PASS END=29189644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 29189645 . G . PASS END=29189645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29189646 . A . PASS END=29189647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr1 29189648 . C . PASS END=29189670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 29189671 . T . PASS END=29189671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 29189672 . C . PASS END=29189672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29189673 . T . PASS END=29189677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29189678 . C . PASS END=29189679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29189680 . A . PASS END=29189686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 29189687 . C . PASS END=29189688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 29189689 . G . PASS END=29189691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 29189692 . G . PASS END=29189695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 29189696 . A . PASS END=29189696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 29189697 . G . PASS END=29189699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 29189700 . C . PASS END=29189700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 29189701 . C . PASS END=29189703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 29189704 . G . PASS END=29189706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 29189707 . G . PASS END=29189730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1102:0,87,255:29,0 chr1 29189731 . C . PASS END=29189759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,71,255:26,0 chr1 29189760 . C . PASS END=29189779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:18:0,51,682:0,54,255:19,0 chr1 29189780 . T . PASS END=29189780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 29189781 . G . PASS END=29189788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 29189789 . C . PASS END=29189795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 29190138 . G . PASS END=29190138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 29313950 . A . PASS END=29314417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:33:0,83,1214:0,83,255:40,0 chr1 29315868 . C . PASS END=29315885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:77:0,120,1800:0,163,255:40,0 chr1 29319842 . C . PASS END=29320054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:38:0,99,1485:0,105,255:40,0 chr1 29323727 . A . PASS END=29323831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:38:0,87,1305:0,107,255:40,0 chr1 29338377 . A . PASS END=29338419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,131,255:40,0 chr1 29342204 . G . PASS END=29342279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:53:0,120,1800:0,159,255:40,0 chr1 29344736 . A . PASS END=29344951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,966:0,84,255:40,0 chr1 29344952 . C . PASS END=29344954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:60:41:0,60,900:0,123,255:22,0 chr1 29356912 . G . PASS END=29356999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,111,1665:0,115,255:40,0 chr1 29358300 . C . PASS END=29358328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:11,0 chr1 29358329 . C . PASS END=29358339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 29358340 . G . PASS END=29358340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 29358341 . C . PASS END=29358348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 29358349 . T . LowGQ END=29358349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:7,0 chr1 29358350 . G . PASS END=29358353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 29359605 . G . PASS END=29359605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 29359606 . A . PASS END=29359606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 29359607 . C . PASS END=29359619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,892:0,67,255:26,0 chr1 29359620 . G . PASS END=29359621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1024:0,87,255:32,0 chr1 29359622 . T . PASS END=29359622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:31,0 chr1 29359623 . A . PASS END=29359745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:32:0,88,1180:0,88,255:40,0 chr1 29359746 . C . PASS END=29359757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:27:0,63,945:0,81,255:23,0 chr1 29362338 . C . PASS END=29362435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:60:0,120,1800:0,164,255:40,0 chr1 29365766 . A . PASS END=29365775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:18,0 chr1 29365776 . A . PASS END=29365776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 29365777 . C . PASS END=29365782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:19,0 chr1 29365783 . C . PASS END=29365796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr1 29365797 . A . PASS END=29365797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 29365798 . A . PASS END=29365810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr1 29365811 . A . PASS END=29365811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:21,0 chr1 29365812 . G . PASS END=29365832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,823:0,62,255:25,0 chr1 29365833 . G . PASS END=29365847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1054:0,84,255:29,0 chr1 29365848 . C . PASS END=29365848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 29365849 . A . PASS END=29365906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1116:0,83,255:35,0 chr1 29365907 . A . PASS END=29365928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 29365929 . C . PASS END=29365938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 29379616 . C . PASS END=29379629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr1 29379630 . T . PASS END=29379630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 29379631 . C . PASS END=29379648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,984:0,65,255:24,0 chr1 29379649 . G . PASS END=29379649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 29379650 . G . PASS END=29379654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:24,0 chr1 29379655 . C . PASS END=29379656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 29379657 . T . PASS END=29379686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:24:0,62,886:0,62,255:26,0 chr1 29379687 . G . PASS END=29379696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 29379697 . G . PASS END=29379697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:27,0 chr1 29379698 . C . PASS END=29379766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1042:0,89,255:37,0 chr1 29379767 . G . PASS END=29379767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,2 chr1 29379768 . A . PASS END=29379768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1311:0,48,255:37,2 chr1 29379769 . A . PASS END=29379782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1396:0,98,255:38,0 chr1 29379783 . C . PASS END=29379783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr1 29379784 . C . PASS END=29379804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,92,255:35,0 chr1 29379805 . A . PASS END=29379805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:25,0 chr1 29379806 . G . PASS END=29379814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 29379815 . A . PASS END=29379822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:24,0 chr1 29379823 . A . PASS END=29379824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,54,255:23,0 chr1 29385101 . G . PASS END=29385157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:51:0,120,1800:0,140,255:40,0 chr1 29385323 . A . PASS END=29385365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,226,255:40,0 chr1 29386934 . A . PASS END=29386996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:56:0,120,1800:0,155,255:40,0 chr1 29391494 . G . PASS END=29391506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,902:0,62,255:26,0 chr1 29391507 . G . PASS END=29391512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 29391513 . A . PASS END=29391513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1084:0,44,255:30,0 chr1 29391514 . G . PASS END=29391515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 29391516 . A . PASS END=29391516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:30,0 chr1 29391517 . G . PASS END=29391517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 29391518 . A . PASS END=29391518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 29391519 . T . PASS END=29391519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:31,0 chr1 29391520 . C . PASS END=29391529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 29391530 . C . PASS END=29391530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,1 chr1 29391531 . A . PASS END=29391532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:32:0,61,1090:0,61,255:29,1 chr1 29391533 . G . PASS END=29391533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:55:30:0,55,1059:0,55,255:29,1 chr1 29391534 . C . PASS END=29391534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:30,0 chr1 29391535 . C . PASS END=29391576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:36,0 chr1 29391577 . A . PASS END=29391577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 29391578 . G . PASS END=29391633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,84,255:36,0 chr1 29391634 . T . PASS END=29391634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:26,0 chr1 29391635 . C . PASS END=29391635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29391636 . T . PASS END=29391636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:25,0 chr1 29391637 . T . PASS END=29391642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29391643 . C . PASS END=29391643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 29391644 . A . PASS END=29391662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,881:0,64,255:26,0 chr1 29391663 . G . PASS END=29391663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:20,0 chr1 29391664 . A . PASS END=29391667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:22,0 chr1 29391668 . G . PASS END=29391677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,50,255:16,0 chr1 29391678 . C . PASS END=29391683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 29391684 . C . PASS END=29391685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,502:0,28,255:11,0 chr1 29391686 . A . PASS END=29391691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 29395245 . G . PASS END=29395295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,182,255:40,0 chr1 29395678 . T . PASS END=29395806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:34:0,99,1435:0,99,255:40,0 chr1 29396876 . A . PASS END=29397127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:30:0,90,1070:0,90,255:40,0 chr1 29399099 . T . PASS END=29399173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:61:0,120,1800:0,156,255:40,0 chr1 29411250 . A G, 48.75 PASS DP=68;MQ=250.00;MQRankSum=7.034;ReadPosRankSum=5.293;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,30,0:0.441,0.000:68:21,15,0:17,15,0:47:84,0,50,1036,1359,2395:255,0,255:35,0:4.8749e+01,7.9730e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,18,14,16:13,25,13,17 chr1 29422667 . A . PASS END=29422667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 29422668 . G . PASS END=29422668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 29422669 . T . PASS END=29422677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,787:0,66,255:25,0 chr1 29422678 . C . PASS END=29422678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 29422679 . A . PASS END=29422679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 29422680 . T . PASS END=29422680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 29422681 . T . PASS END=29422682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 29422683 . G . PASS END=29422851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:29:0,84,1245:0,84,255:40,0 chr1 29422852 . A . PASS END=29422852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:29,0 chr1 29422853 . G . PASS END=29422883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,98,255:39,0 chr1 29422884 . A . PASS END=29422884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:36,0 chr1 29422885 . T . PASS END=29422982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1127:0,80,255:36,0 chr1 29422983 . T . PASS END=29422983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:32,0 chr1 29422984 . G . PASS END=29423024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1217:0,89,255:35,0 chr1 29423025 . T . PASS END=29423025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1213:0,78,255:29,0 chr1 29423026 . T . PASS END=29423054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1166:0,85,255:35,0 chr1 29423055 . A . PASS END=29423055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:30,0 chr1 29423056 . T . PASS END=29423060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1097:0,82,255:32,0 chr1 29423061 . C . PASS END=29423061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:29,0 chr1 29423062 . A . PASS END=29423069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1219:0,88,255:30,0 chr1 29423070 . A . PASS END=29423070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:27,0 chr1 29423071 . C . PASS END=29423072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:29,0 chr1 29423073 . T . PASS END=29423075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 29423076 . A . PASS END=29423078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 29423079 . T . PASS END=29423085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,80,255:26,0 chr1 29423086 . C . PASS END=29423086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:24,0 chr1 29423087 . C . PASS END=29423099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:24,0 chr1 29423100 . T . PASS END=29423100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:23,0 chr1 29423101 . C . PASS END=29423102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 29423103 . T . PASS END=29423103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,697:0,36,255:21,0 chr1 29423104 . T . PASS END=29423110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 29423111 . T . PASS END=29423111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 29423112 . T . PASS END=29423116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 29424319 . C . PASS END=29424439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:36:0,81,1215:0,91,255:40,0 chr1 29424440 . C . PASS END=29424447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:25,0 chr1 29435848 . A . PASS END=29435949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,114,1710:0,115,255:40,0 chr1 29438880 . A . PASS END=29438960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:62:0,120,1800:0,179,255:40,0 chr1 29442211 . G . PASS END=29442309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1202:0,81,255:40,0 chr1 29447417 . T . PASS END=29447425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 29447426 . G . PASS END=29447441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 29447442 . C . PASS END=29447445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 29447446 . C . PASS END=29447446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 29447447 . T . PASS END=29447482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:13,0 chr1 29447483 . C . PASS END=29447483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 29447484 . A . PASS END=29447499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 29447500 . G . PASS END=29447508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 29447509 . A . PASS END=29447509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29447510 . G . PASS END=29447515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 29447516 . A . PASS END=29447520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 29447521 . C . PASS END=29447531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 29447532 . A . PASS END=29447536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 29447537 . G . PASS END=29447562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,615:0,48,255:18,0 chr1 29447563 . A . PASS END=29447563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 29447564 . C . PASS END=29447593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,560:0,51,255:19,0 chr1 29447594 . C . PASS END=29447594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 29447595 . T . PASS END=29447595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 29447596 . G . PASS END=29447609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 29447610 . A . PASS END=29447629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,675:0,44,255:19,0 chr1 29447630 . T . PASS END=29447630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr1 29447631 . G . PASS END=29447641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 29447642 . T . PASS END=29447642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr1 29447643 . G . PASS END=29447667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,459:0,39,255:13,0 chr1 29447668 . G . PASS END=29447668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:10,0 chr1 29447669 . G . PASS END=29447670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 29447671 . A . PASS END=29447671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 29447672 . G . PASS END=29447682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 29447683 . A . PASS END=29447683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 29447684 . G . PASS END=29447684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 29447685 . G . PASS END=29447685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 29447686 . C . PASS END=29447686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,357:0,5,255:10,0 chr1 29447687 . A . PASS END=29447690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 29447691 . A . PASS END=29447691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 29447692 . A . PASS END=29447711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 29447712 . G . PASS END=29447725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,304:0,27,255:9,0 chr1 29447726 . A . PASS END=29447785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 29447786 . C . PASS END=29447786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 29447787 . T . PASS END=29447794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 29447795 . G . PASS END=29447809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr1 29447810 . A . PASS END=29447810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 29447811 . C . PASS END=29447815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 29447816 . A . PASS END=29447819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 29447820 . C . PASS END=29447821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 29447822 . G . PASS END=29447871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 29447872 . G . PASS END=29447889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 29447890 . C . PASS END=29447894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 29447895 . T . PASS END=29447895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 29447896 . G . PASS END=29447927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 29447928 . T . PASS END=29447928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:11,0 chr1 29447929 . C . PASS END=29447932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 29447933 . C . PASS END=29447933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 29447934 . A . PASS END=29447934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 29447935 . G . PASS END=29447936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 29447937 . A . PASS END=29447945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,540:0,32,255:13,0 chr1 29447946 . G . PASS END=29447952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:15,0 chr1 29447953 . T . PASS END=29447953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 29447954 . G . PASS END=29447955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 29447956 . A . PASS END=29447957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29447958 . A . PASS END=29447958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 29447959 . C . PASS END=29447961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29447962 . A . PASS END=29447962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 29447963 . C . PASS END=29447970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 29447971 . C . PASS END=29447972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 29447973 . C . PASS END=29447976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 29447977 . T . PASS END=29447977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 29447978 . G . PASS END=29447978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 29447979 . A . PASS END=29447979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 29447980 . T . PASS END=29448005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,380:0,33,255:12,0 chr1 29448006 . T . PASS END=29448006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 29448007 . C . PASS END=29448010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 29448011 . C . PASS END=29448011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 29448012 . G . PASS END=29448019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 29448020 . A . PASS END=29448027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr1 29448028 . C . PASS END=29448030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 29448031 . C . PASS END=29448037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 29448038 . A . PASS END=29448038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 29448039 . C . PASS END=29448043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 29448044 . G . PASS END=29448044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 29448045 . C . PASS END=29448045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29448046 . G . PASS END=29448046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 29448047 . T . PASS END=29448049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29448050 . C . PASS END=29448050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 29448051 . A . PASS END=29448054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 29448055 . C . PASS END=29448055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr1 29448056 . G . PASS END=29448056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 29448057 . C . PASS END=29448059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,28,255:9,0 chr1 29448060 . A . PASS END=29448061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 29448062 . C . PASS END=29448062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 29448063 . T . PASS END=29448063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 29448064 . G . PASS END=29448064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 29448065 . G . PASS END=29448067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 29448068 . C . PASS END=29448069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 29448070 . A . PASS END=29448072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 29448073 . T . PASS END=29448080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 29448081 . G . PASS END=29448083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 29448084 . G . PASS END=29448090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:9,0 chr1 29448091 . A . PASS END=29448095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 29448096 . G . PASS END=29448108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,333:0,27,255:9,0 chr1 29448109 . G . PASS END=29448137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 29448138 . C . PASS END=29448193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr1 29448194 . G . PASS END=29448216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 29448217 . C . PASS END=29448217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 29448218 . C . PASS END=29448228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:7:0,12,180:0,21,255:6,0 chr1 29448229 . C . PASS END=29448230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:6:0,9,135:0,18,210:3,0 chr1 29448231 . G . PASS END=29448232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 29448233 . C . PASS END=29448233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:4,0 chr1 29448234 . G . PASS END=29448257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,188:0,15,188:6,0 chr1 29448258 . C . PASS END=29448258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 29448259 . C . PASS END=29448268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 29448269 . G . PASS END=29448269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 29448270 . C . PASS END=29448270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 29448271 . C . PASS END=29448272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 29448273 . A . PASS END=29448273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 29448274 . A . PASS END=29448287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,360:0,36,255:17,0 chr1 29448288 . C . PASS END=29448288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 29448289 . C . PASS END=29448295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:24,0 chr1 29448296 . G . PASS END=29448298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,847:0,36,255:25,0 chr1 29448299 . C . PASS END=29448335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:30:0,86,1141:0,86,255:34,0 chr1 29448336 . G . PASS END=29448336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 29448337 . T . PASS END=29448360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1190:0,83,255:33,0 chr1 29455472 . C . PASS END=29455484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,115,1537:0,115,255:40,0 chr1 29474922 . T . PASS END=29475175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:35:0,84,1301:0,84,255:40,0 chr1 29475176 . C . PASS END=29475204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,886:0,61,255:26,0 chr1 29475205 . C . PASS END=29475212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 29475213 . G . PASS END=29475214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29475215 . C . PASS END=29475215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:20:29:0,20,701:0,20,255:22,0 chr1 29475216 . T . PASS END=29475217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29475218 . C . PASS END=29475218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:26,2 chr1 29475219 . C . PASS END=29475219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:20:30:0,20,941:0,20,255:26,2 chr1 29475220 . T . PASS END=29475221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,939:0,18,255:26,2 chr1 29475222 . C . PASS END=29475222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:27,0 chr1 29475223 . T . PASS END=29475226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 29475227 . T . PASS END=29475227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 29475228 . C . PASS END=29475232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 29475233 . T . PASS END=29475234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 29475235 . C . PASS END=29475242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29475243 . C . PASS END=29475245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29475246 . C . PASS END=29475246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 29475247 . T . PASS END=29475250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 29475251 . T . PASS END=29475251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:25,0 chr1 29475252 . G . PASS END=29475255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 29475256 . C . PASS END=29475257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 29475258 . C . PASS END=29475258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 29475259 . T . PASS END=29475261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29475262 . C . PASS END=29475263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29475264 . G . PASS END=29475266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 29475267 . T . PASS END=29475267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 29475268 . C . PASS END=29475303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1055:0,84,255:34,0 chr1 29475304 . C . PASS END=29475315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1575:0,111,255:37,0 chr1 29475316 . C . LowGQ END=29475316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,845:28,0,255:28,0 chr1 29475317 . T . PASS END=29475317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:33,0 chr1 29475318 . C . PASS END=29475318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:11:37:0,11,967:0,11,255:28,0 chr1 29475319 . T . PASS END=29475340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:36:0,98,1299:0,98,255:38,0 chr1 29475341 . C T, 48.35 PASS DP=39;MQ=250.00;MQRankSum=5.282;ReadPosRankSum=1.600;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,17,0:0.436,0.000:39:12,10,0:10,7,0:47:83,0,50,550,787,1337:255,0,255:21,0:4.8353e+01,8.5166e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,7,10:10,12,10,7 chr1 29475342 . C . PASS END=29475393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1285:0,84,255:38,0 chr1 29475394 . C G, 47.93 PASS DP=38;MQ=250.00;MQRankSum=5.189;ReadPosRankSum=2.646;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,16,0:0.421,0.000:38:13,8,0:9,8,0:47:83,0,50,572,782,1354:255,0,255:21,0:4.7934e+01,9.1637e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,8,8:14,8,8,8 chr1 29475395 . C . PASS END=29475431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1350:0,102,255:37,0 chr1 29475432 . C . PASS END=29475523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:36:0,96,1295:0,96,255:40,0 chr1 29475524 . T . PASS END=29475524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1421:0,74,255:40,0 chr1 29475525 . A . PASS END=29475610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:38:0,82,1396:0,82,255:40,0 chr1 29475611 . G . PASS END=29475613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,114,255:31,0 chr1 29475614 . T . PASS END=29475616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:39:0,75,1125:0,100,255:26,0 chr1 29475617 . T . PASS END=29475620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,120,255:28,0 chr1 29475621 . A . PASS END=29475643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 29475644 . T . PASS END=29475647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 29475648 . T G, 49.18 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=2.949;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,9,0:0.429,0.000:21:6,3,0:6,6,0:48:84,0,50,322,400,722:255,0,255:10,0:4.9175e+01,7.4293e-05,5.3000e+01,3.2174e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,10,4,5:6,6,4,5 chr1 29475649 . T . PASS END=29475685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:18,0 chr1 29475686 . G . PASS END=29475696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 29475697 . T . PASS END=29475697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 29475698 . G . PASS END=29475723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:15,0 chr1 29475724 . G . PASS END=29475738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 29476615 . C . PASS END=29476704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,111,1665:0,118,255:40,0 chr1 29481208 . C . PASS END=29481208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 29481209 . T . PASS END=29481209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 29481210 . T . PASS END=29481210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 29481211 . G . PASS END=29481231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:33:0,80,1225:0,80,255:38,0 chr1 29481232 . T . PASS END=29481232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:37,0 chr1 29481233 . A . PASS END=29481402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:38:0,84,1260:0,96,255:40,0 chr1 29481403 . C . PASS END=29481410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:33:0,78,1170:0,99,255:26,0 chr1 29481411 . A . PASS END=29481411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:24,0 chr1 29481412 . C . PASS END=29481422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,71,255:26,0 chr1 29485886 . C . PASS END=29485998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,153,255:40,0 chr1 29486530 . T . PASS END=29486570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:55:0,110,1800:0,110,255:40,0 chr1 29486887 . T . PASS END=29487002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,89,255:40,0 chr1 29487003 . A . PASS END=29487025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,71,255:27,0 chr1 29487026 . A . PASS END=29487029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,59,255:18,0 chr1 29492521 . T . PASS END=29492576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,125,255:40,0 chr1 29493241 . C . PASS END=29493243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 29493244 . T . LowGQ END=29493244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,243:9,0,252:9,0 chr1 29493245 . G . PASS END=29493250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 29493251 . T . PASS END=29493251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 29493252 . G . PASS END=29493256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 29493257 . G . PASS END=29493257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 29493258 . C . PASS END=29493262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 29493263 . C . PASS END=29493263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 29493264 . T . PASS END=29493264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 29493265 . G . PASS END=29493273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,405:0,20,255:9,0 chr1 29493274 . C . PASS END=29493285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 29493286 . C . PASS END=29493287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 29493288 . A . PASS END=29493288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 29493289 . T . PASS END=29493292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 29493293 . C . PASS END=29493302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 29493303 . A . PASS END=29493305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 29493306 . C . PASS END=29493306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 29493307 . T . PASS END=29493319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:15,0 chr1 29493320 . A . PASS END=29493320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 29493321 . A . PASS END=29493329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:17,0 chr1 29493330 . T . PASS END=29493330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 29493331 . T . PASS END=29493338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:17,0 chr1 29493339 . A . PASS END=29493339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr1 29493340 . C . PASS END=29493340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 29493341 . C . PASS END=29493347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr1 29493348 . T . LowGQ END=29493348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,371:15,0,255:12,0 chr1 29493349 . C . PASS END=29493372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,629:0,40,255:19,0 chr1 29493373 . C . PASS END=29493373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:17,0 chr1 29493374 . C . PASS END=29493406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,607:0,54,255:18,0 chr1 29493407 . C . PASS END=29493417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 29493418 . T . PASS END=29493424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 29495015 . C . PASS END=29495025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:19,0 chr1 29495026 . G . PASS END=29495028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 29495029 . A . PASS END=29495029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 29495030 . A . PASS END=29495039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,923:0,66,255:26,0 chr1 29495040 . A . PASS END=29495050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 29495051 . T . PASS END=29495051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 29495052 . G . PASS END=29495080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1103:0,90,255:32,0 chr1 29495081 . T . PASS END=29495081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:30,0 chr1 29495082 . T . PASS END=29495106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:32,0 chr1 29495107 . A . PASS END=29495107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 29495108 . T . PASS END=29495114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 29495115 . C . PASS END=29495115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 29495116 . T . PASS END=29495122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 29495123 . A . PASS END=29495124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 29495125 . C . PASS END=29495126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 29495127 . T . PASS END=29495141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 29495142 . C . PASS END=29495146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,72,255:16,0 chr1 29495147 . C . PASS END=29495150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:20:0,33,495:0,60,255:11,0 chr1 29508158 . C . PASS END=29508162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 29508163 . C . PASS END=29508193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 29508194 . C . PASS END=29508219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 29508220 . C . PASS END=29508243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 29508244 . G . PASS END=29508253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 29508254 . A . PASS END=29508263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 29508264 . T . PASS END=29508264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 29520534 . T . PASS END=29520536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 29520537 . C . PASS END=29520542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,910:0,81,255:28,0 chr1 29520543 . G . PASS END=29520543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 29520544 . A . PASS END=29520549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,896:0,84,255:28,0 chr1 29520550 . T . PASS END=29520550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 29520551 . G . PASS END=29520553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 29520554 . T . PASS END=29520554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 29520555 . T . PASS END=29520639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1101:0,83,255:34,0 chr1 29520640 . T . PASS END=29520640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 29520641 . G . PASS END=29520650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 29520651 . G . PASS END=29520651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 29520652 . A . PASS END=29520652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29520653 . T . PASS END=29520662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 29520663 . C . PASS END=29520687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 29520688 . T . PASS END=29520691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 29520702 . T . PASS END=29520702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 29522453 . C . PASS END=29522554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,116,1800:0,116,255:40,0 chr1 29522581 . T . PASS END=29522770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:35:0,88,1227:0,88,255:40,0 chr1 29527025 . T . PASS END=29527025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1157:0,82,255:32,0 chr1 29527028 . G . PASS END=29527036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1189:0,86,255:36,0 chr1 29527037 . C . PASS END=29527037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:35,0 chr1 29527038 . G . PASS END=29527038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1318:0,92,255:35,0 chr1 29527039 . C . PASS END=29527040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:36,0 chr1 29527041 . G . PASS END=29527042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1357:0,95,255:37,0 chr1 29527043 . A . PASS END=29527044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1319:0,72,255:35,0 chr1 29527045 . C . PASS END=29527101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:35:0,82,1305:0,82,255:38,0 chr1 29527886 . T . PASS END=29527997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:88:35:0,88,1130:0,88,255:40,0 chr1 29527998 . C . PASS END=29527998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:31,0 chr1 29527999 . A . PASS END=29528015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1180:0,83,255:30,0 chr1 29528016 . T . PASS END=29528016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,960:0,60,255:27,0 chr1 29528017 . C . PASS END=29528019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 29528020 . A . PASS END=29528030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr1 29528455 . C . PASS END=29528545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1040:0,80,255:33,0 chr1 29528546 . T . PASS END=29528557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,898:0,62,255:24,0 chr1 29529643 . C . PASS END=29529653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,909:0,62,255:26,0 chr1 29529654 . C . PASS END=29529654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 29529655 . A . PASS END=29529655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:24,0 chr1 29529656 . C . PASS END=29529658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29529659 . T . PASS END=29529659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 29529660 . G . PASS END=29529660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 29529661 . A . PASS END=29529661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 29529662 . T . PASS END=29529666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 29529667 . C . PASS END=29529667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 29529668 . T . PASS END=29529673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1172:0,87,255:31,0 chr1 29529674 . C . PASS END=29529674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 29529675 . C . PASS END=29529675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 29529676 . A . PASS END=29529676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 29529677 . G . PASS END=29529698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:32,0 chr1 29529699 . T C, 40.23 PASS DP=32;MQ=250.00;MQRankSum=4.452;ReadPosRankSum=3.029;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,10,0:0.312,0.000:32:11,8,0:11,2,0:40:75,0,50,358,750,1107:255,0,255:18,0:4.0229e+01,4.3387e-04,5.3000e+01,3.5763e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,7,3:9,13,5,5 chr1 29529700 . G . PASS END=29529701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 29529702 . T . PASS END=29529725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:26,0 chr1 29529726 . A . PASS END=29529726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 29529727 . T . PASS END=29529736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 29529737 . C . PASS END=29529745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 29533274 . C . PASS END=29533407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,83,255:40,0 chr1 29533408 . C . PASS END=29533408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 29533409 . G . PASS END=29533410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 29533411 . C . PASS END=29533414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 29533415 . T . PASS END=29533415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr1 29533416 . T . PASS END=29533417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 29542517 . C . PASS END=29542520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1327:0,105,255:36,0 chr1 29542521 . A . PASS END=29542521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1076:0,69,255:35,0 chr1 29542522 . C . PASS END=29542539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1255:0,87,255:40,0 chr1 29542540 . A . PASS END=29542540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1392:0,79,255:40,0 chr1 29542541 . C . PASS END=29542542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,113,1590:0,113,255:40,0 chr1 29542543 . C . PASS END=29542543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1433:0,79,255:40,0 chr1 29542544 . A . PASS END=29542599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,105,1551:0,105,255:40,0 chr1 29542600 . C . PASS END=29542636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1197:0,83,255:40,0 chr1 29542637 . A G, 48.58 PASS DP=33;MQ=250.00;MQRankSum=4.826;ReadPosRankSum=4.207;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,14,0:0.424,0.000:33:12,4,0:7,10,0:47:83,0,50,501,614,1115:255,0,255:17,0:4.8580e+01,8.2059e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,6,8:13,6,8,6 chr1 29542638 . T . PASS END=29542648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:31,0 chr1 29543100 . C . PASS END=29543197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,111,1800:0,111,255:40,0 chr1 29547350 . A . PASS END=29547454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,128,255:40,0 chr1 29557243 . T . PASS END=29557253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:24,0 chr1 29557254 . G . PASS END=29557254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 29557255 . G . PASS END=29557261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:25,0 chr1 29557262 . C . PASS END=29557264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 29557265 . C . PASS END=29557265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 29557266 . G . PASS END=29557270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:25,0 chr1 29557271 . G . PASS END=29557271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 29557272 . C . PASS END=29557281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,876:0,61,255:25,0 chr1 29557282 . A . PASS END=29557282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 29557283 . G . PASS END=29557299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,886:0,61,255:24,0 chr1 29557300 . G . PASS END=29557300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 29557301 . G . PASS END=29557316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,931:0,75,255:26,0 chr1 29557317 . G . PASS END=29557326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 29557327 . G . PASS END=29557327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 29557328 . C . PASS END=29557331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29557332 . A . PASS END=29557332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 29557333 . G . PASS END=29557334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 29557335 . T . PASS END=29557335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 29557336 . C . PASS END=29557338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 29557339 . T . PASS END=29557339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 29557340 . G . PASS END=29557357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 29557358 . G . PASS END=29557360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 29557361 . G . PASS END=29557362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 29557363 . C . PASS END=29557365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 29557366 . C . PASS END=29557366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:27,0 chr1 29557367 . G . PASS END=29557367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr1 29557368 . C . PASS END=29557376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1147:0,90,255:30,0 chr1 29557377 . G . PASS END=29557377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 29557378 . G . PASS END=29557378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 29557379 . C . PASS END=29557379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 29557380 . G . PASS END=29557418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1216:0,83,255:38,0 chr1 29557457 . C . PASS END=29557457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 29563157 . A . PASS END=29563174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 29563175 . C . PASS END=29563185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 29563186 . A . PASS END=29563197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 29563198 . G . PASS END=29563198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 29563199 . C . PASS END=29563229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,288:0,27,255:9,0 chr1 29581787 . C . PASS END=29581918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:34:0,99,1382:0,102,255:40,0 chr1 29585017 . G . PASS END=29585023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 29585024 . C . PASS END=29585031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 29585032 . T . PASS END=29585032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 29585033 . C . PASS END=29585044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 29585045 . G . PASS END=29585045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 29585046 . C . PASS END=29585051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 29585052 . C . PASS END=29585052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 29585053 . C . PASS END=29585058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 29585059 . A . PASS END=29585059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 29585060 . G . PASS END=29585068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 29585069 . T . PASS END=29585069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 29585070 . G . PASS END=29585099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 29585100 . A . PASS END=29585109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1185:0,80,255:28,0 chr1 29585110 . T . PASS END=29585139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,953:0,62,255:26,0 chr1 29585140 . A . PASS END=29585144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 29585145 . C . PASS END=29585147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 29585148 . A . PASS END=29585156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 29585157 . A . PASS END=29585159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 29585160 . C . PASS END=29585162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29585163 . G . PASS END=29585181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,67,255:24,0 chr1 29585182 . A . PASS END=29585191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 29585192 . C . PASS END=29585192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 29585193 . C . PASS END=29585226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 29585227 . A . PASS END=29585227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,488:0,14,255:13,0 chr1 29585228 . C . PASS END=29585241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 29585242 . A . PASS END=29585258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 29585259 . G . PASS END=29585274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,294:0,24,227:8,0 chr1 29585275 . C . PASS END=29585288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,233:6,0 chr1 29585773 . G . PASS END=29585775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 29585776 . C . PASS END=29585777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 29585778 . G . PASS END=29585778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 29585779 . T . PASS END=29585791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:18,0 chr1 29585792 . T . PASS END=29585792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 29585793 . C . PASS END=29585798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr1 29585799 . A . PASS END=29585799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 29585800 . G . PASS END=29585808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 29585809 . G . PASS END=29585812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 29585813 . A . PASS END=29585813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 29585814 . C . PASS END=29585824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 29585825 . A . PASS END=29585825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:22,0 chr1 29585826 . T . PASS END=29585829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 29585830 . A . PASS END=29585830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 29585831 . T . PASS END=29585835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 29585836 . C . PASS END=29585837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 29585838 . T . PASS END=29585842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr1 29585843 . G . PASS END=29585843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 29585844 . C . PASS END=29585854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,732:0,66,255:23,0 chr1 29585961 . C . PASS END=29585975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:33:0,95,1349:0,95,255:35,0 chr1 29585976 . T . PASS END=29585976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1234:0,67,255:33,0 chr1 29585977 . C . PASS END=29585988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1394:0,111,255:37,0 chr1 29585989 . C . PASS END=29585989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 29585990 . G . PASS END=29586012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1305:0,95,255:37,0 chr1 29586013 . G . PASS END=29586013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1330:0,68,255:33,0 chr1 29586014 . A . PASS END=29586018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,101,1426:0,101,255:36,0 chr1 29586019 . G . PASS END=29586019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:33,0 chr1 29586020 . T . PASS END=29586023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:36:0,87,1305:0,95,255:31,0 chr1 29586024 . T . PASS END=29586024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:28,0 chr1 29586025 . C . PASS END=29586026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,94,255:28,0 chr1 29586027 . A . PASS END=29586027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 29586028 . G . PASS END=29586031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,91,255:27,0 chr1 29586032 . A . PASS END=29586033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1121:0,71,255:26,0 chr1 29586034 . G . PASS END=29586034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 29586035 . G . PASS END=29586035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:25,0 chr1 29586036 . C . PASS END=29586038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr1 29586039 . C . PASS END=29586039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 29586040 . G . PASS END=29586043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1097:0,82,255:30,0 chr1 29586044 . A . PASS END=29586045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,955:0,46,255:30,0 chr1 29586046 . A . PASS END=29586047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,956:0,63,255:29,0 chr1 29586048 . C . PASS END=29586049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1081:0,82,255:31,0 chr1 29586050 . G . PASS END=29586050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:29,0 chr1 29586051 . C . PASS END=29586051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 29586052 . C . PASS END=29586053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:46:32:0,46,1008:0,46,255:29,0 chr1 29586054 . A . PASS END=29586054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1057:0,66,255:28,0 chr1 29586055 . G . PASS END=29586058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1111:0,82,255:31,0 chr1 29586059 . G . PASS END=29586059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,917:0,32,255:27,0 chr1 29586060 . A . PASS END=29586060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:29,0 chr1 29586061 . A . PASS END=29586063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1073:0,82,255:30,0 chr1 29586064 . C . LowGQ END=29586064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:33:0,0,845:28,0,255:25,0 chr1 29586065 . T . PASS END=29586065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 29586066 . T . PASS END=29586066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:31:32:0,31,814:0,31,255:27,0 chr1 29586067 . C . PASS END=29586067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 29586068 . C . PASS END=29586068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:7:32:0,7,817:0,7,255:24,0 chr1 29586069 . T . PASS END=29586069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,917:0,46,255:24,0 chr1 29586070 . C . LowGQ END=29586070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,825:7,0,255:23,0 chr1 29586071 . T . PASS END=29586071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 29586072 . T . PASS END=29586072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,961:0,57,255:26,0 chr1 29586073 . G . PASS END=29586073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:26,0 chr1 29586074 . C . PASS END=29586074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:45:31:0,45,861:0,45,255:26,0 chr1 29586075 . A . PASS END=29586075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 29586076 . A . PASS END=29586076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:12:31:0,12,764:0,12,255:23,0 chr1 29586382 . C . PASS END=29586408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 29586409 . G . PASS END=29586409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 29586410 . C . PASS END=29586419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:17,0 chr1 29586420 . G . PASS END=29586420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 29586421 . C . PASS END=29586443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,599:0,40,255:19,0 chr1 29586444 . G . PASS END=29586444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:18,0 chr1 29586445 . G . PASS END=29586477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,662:0,41,255:19,0 chr1 29586478 . G . PASS END=29586478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 29586479 . A . PASS END=29586485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 29586486 . C . PASS END=29586487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 29586488 . T . PASS END=29586493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 29586494 . G . PASS END=29586499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr1 29586500 . T . PASS END=29586550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 29586551 . T . PASS END=29586551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 29586552 . C . PASS END=29586556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 29586725 . A . PASS END=29586728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 29586729 . G . PASS END=29586729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 29586730 . A . PASS END=29586738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 29586739 . A . LowGQ END=29586739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr1 29586740 . G . PASS END=29586740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 29586741 . G . PASS END=29586772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 29586773 . G . PASS END=29586773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 29586774 . G . PASS END=29586775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 29586776 . C . PASS END=29586779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,199:6,0 chr1 29587122 . A . PASS END=29587122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 29587123 . G . PASS END=29587168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:19,0 chr1 29587169 . A . PASS END=29587174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 29587175 . C . PASS END=29587182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 29587183 . C . PASS END=29587223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,845:0,63,255:24,0 chr1 29587224 . T . PASS END=29587224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 29587225 . G . PASS END=29587286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,869:0,62,255:25,0 chr1 29587287 . T . PASS END=29587288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 29587289 . C . PASS END=29587314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 29587315 . C . PASS END=29587315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 29587316 . C . PASS END=29587337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 29587338 . G . PASS END=29587340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 29587341 . T . PASS END=29587346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 29587347 . T . PASS END=29587347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 29587348 . C . PASS END=29587365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 29587366 . C . PASS END=29587366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 29587367 . G . PASS END=29587371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 29587372 . T . PASS END=29587387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:16,0 chr1 29587388 . C . PASS END=29587394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 29587395 . T . PASS END=29587397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 29587398 . G . PASS END=29587398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 29587399 . C . PASS END=29587411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 29587412 . G . PASS END=29587412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 29587413 . C . PASS END=29587415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 29601960 . A . PASS END=29601963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 29601964 . C . PASS END=29601964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 29601965 . A . PASS END=29601965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 29601966 . T . PASS END=29601966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:21,0 chr1 29601967 . G . PASS END=29601967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:20,0 chr1 29601968 . A . PASS END=29601968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 29601969 . G . PASS END=29601969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 29601970 . G . PASS END=29601970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 29601971 . G . PASS END=29601971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 29601972 . C . PASS END=29601976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 29601977 . A . PASS END=29601977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 29601978 . A . PASS END=29601981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,892:0,61,255:24,0 chr1 29601982 . C . PASS END=29601982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 29601983 . C . PASS END=29601983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 29601984 . T . PASS END=29601984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 29601985 . G . PASS END=29601985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:22,0 chr1 29601986 . G . PASS END=29602015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,884:0,61,255:26,0 chr1 29602016 . A . PASS END=29602024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1100:0,87,255:29,0 chr1 29602025 . T . PASS END=29602025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:28,0 chr1 29602026 . G . PASS END=29602056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:31,0 chr1 29602057 . C . PASS END=29602059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr1 29602060 . C . PASS END=29602099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1350:0,98,255:39,0 chr1 29602100 . A . PASS END=29602100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:38,0 chr1 29602101 . G . PASS END=29602266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,89,255:40,0 chr1 29602267 . T . PASS END=29602268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr1 29605524 . T . PASS END=29605628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1219:0,88,255:40,0 chr1 29605629 . A . PASS END=29605633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:33:0,63,945:0,81,255:24,0 chr1 29605968 . A . PASS END=29606090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,903:0,81,255:40,0 chr1 29606091 . T . PASS END=29606105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:38:0,81,1296:0,81,255:37,0 chr1 29606106 . C . PASS END=29606106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:17:38:0,17,1070:0,17,255:29,0 chr1 29606107 . G . PASS END=29606107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1282:0,45,255:30,0 chr1 29606108 . G . PASS END=29606112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1395:0,100,255:32,0 chr1 29606113 . G . PASS END=29606113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1073:0,61,255:29,0 chr1 29606114 . C . PASS END=29606116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,94,255:31,0 chr1 29606117 . A . PASS END=29606117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1110:0,69,255:30,0 chr1 29606118 . G . PASS END=29606118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1072:0,55,255:29,0 chr1 29606119 . G . PASS END=29606120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:30,0 chr1 29606121 . A . PASS END=29606121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:29,0 chr1 29606122 . A . PASS END=29606123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 29606124 . G . PASS END=29606124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,923:0,32,255:28,0 chr1 29606125 . G . PASS END=29606125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:29,0 chr1 29606126 . C . PASS END=29606141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:32,0 chr1 29606142 . C . PASS END=29606151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,80,255:25,0 chr1 29606152 . T . PASS END=29606152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:23,0 chr1 29606153 . A . PASS END=29606154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr1 29606155 . C . PASS END=29606155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,759:0,25,255:21,0 chr1 29606156 . C . PASS END=29606156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 29606157 . A . PASS END=29606157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 29606158 . C . PASS END=29606158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 29606159 . T . PASS END=29606160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 29606161 . A . PASS END=29606161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 29606162 . C . PASS END=29606164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,784:0,55,255:19,0 chr1 29606165 . C . PASS END=29606165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:17,0 chr1 29606166 . T . PASS END=29606169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,55,255:17,0 chr1 29606551 . C . PASS END=29606630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:35:0,84,1260:0,98,255:40,0 chr1 29606631 . C . PASS END=29606643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 29606644 . C . PASS END=29606653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,56,255:18,0 chr1 29609188 . T . PASS END=29609255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:26,0 chr1 29609256 . G . PASS END=29609257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 29609258 . T . PASS END=29609258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 29609259 . T . PASS END=29609263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 29609264 . G . PASS END=29609330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,61,255:26,0 chr1 29609331 . C . PASS END=29609331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 29609332 . C . PASS END=29609334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 29609335 . C . PASS END=29609336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 29609337 . G . PASS END=29609337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 29609338 . T . PASS END=29609340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 29609341 . A . PASS END=29609344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 29609345 . G . PASS END=29609407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,543:0,45,255:19,0 chr1 29609408 . G . PASS END=29609415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 29609416 . G . PASS END=29609417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr1 29609418 . A . PASS END=29609423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 29609424 . A . PASS END=29609424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 29609425 . T . PASS END=29609426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 29609427 . T . PASS END=29609427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:10,0 chr1 29609428 . C . PASS END=29609428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 29609429 . A . PASS END=29609429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 29609430 . T . PASS END=29609441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 29609442 . C . PASS END=29609449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 29609450 . C . PASS END=29609457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:11:0,18,270:0,33,255:6,0 chr1 29609458 . G . PASS END=29609461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:15:10:0,15,225:0,30,255:5,0 chr1 29610452 . G . PASS END=29610464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr1 29610465 . A . PASS END=29610465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 29610466 . T . PASS END=29610478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 29610479 . G . PASS END=29610479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 29610480 . C . PASS END=29610480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 29610481 . C . PASS END=29610485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 29610486 . A . PASS END=29610487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 29610488 . G . PASS END=29610488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 29611243 . C . PASS END=29611266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,717:0,63,255:25,0 chr1 29611267 . C . PASS END=29611285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:30,0 chr1 29611286 . A . PASS END=29611286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:29,0 chr1 29611287 . T . PASS END=29611345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1163:0,87,255:36,0 chr1 29611346 . T . PASS END=29611369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 29611370 . C . PASS END=29611370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 29611371 . A . PASS END=29611371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 29611372 . T . PASS END=29611381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:19,0 chr1 29616195 . G . PASS END=29616224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,86,255:36,0 chr1 29618381 . G . PASS END=29618387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 29618388 . G . PASS END=29618388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 29618389 . T . PASS END=29618390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,1000:0,78,255:26,0 chr1 29618391 . A . PASS END=29618391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 29618392 . A . PASS END=29618392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 29618393 . C . PASS END=29618394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 29618395 . T . PASS END=29618396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 29618397 . A . PASS END=29618398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 29618399 . C . PASS END=29618399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 29618400 . A . PASS END=29618401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 29618402 . G . PASS END=29618403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 29618404 . C . PASS END=29618412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:31,0 chr1 29618413 . A . PASS END=29618413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,953:0,79,255:30,0 chr1 29618414 . C . PASS END=29618414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 29618415 . T . PASS END=29618415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:31,0 chr1 29618416 . A . PASS END=29618426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1182:0,99,255:34,0 chr1 29618427 . A . PASS END=29618427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:44:35:0,44,1103:0,44,255:32,0 chr1 29618428 . A . PASS END=29618442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1340:0,92,255:35,0 chr1 29618443 . G . PASS END=29618443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:32,0 chr1 29618444 . C . PASS END=29618471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:35:0,93,1296:0,94,255:36,0 chr1 29618472 . A . PASS END=29618472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:31,0 chr1 29618473 . G . PASS END=29618492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:33,0 chr1 29618493 . C . PASS END=29618493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 29618494 . G . PASS END=29618504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,978:0,81,255:27,0 chr1 29618505 . T . PASS END=29618519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 29618520 . C . PASS END=29618520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:18,0 chr1 29618521 . A . PASS END=29618538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,657:0,41,255:19,0 chr1 29630367 . G . PASS END=29630368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 29630369 . G . PASS END=29630378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,884:0,63,255:25,0 chr1 29630379 . G . PASS END=29630379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 29630380 . C . PASS END=29630384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 29630385 . G . PASS END=29630401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:30,0 chr1 29630402 . A . PASS END=29630402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 29630403 . G . PASS END=29630504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1080:0,84,255:36,0 chr1 29630505 . A . PASS END=29630505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 29630506 . C . PASS END=29630508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 29630509 . C . PASS END=29630527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 29630528 . G . PASS END=29630528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:22,0 chr1 29630529 . A . PASS END=29630555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 29630556 . A . PASS END=29630557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 29631286 . A . PASS END=29631296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 29631297 . A . PASS END=29631297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 29631298 . G . PASS END=29631318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,871:0,75,255:26,0 chr1 29631319 . A . PASS END=29631322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 29631323 . A . PASS END=29631323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 29631324 . C . PASS END=29631325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 29631326 . A . PASS END=29631361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:26,0 chr1 29631864 . A . PASS END=29631871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:39:0,93,1568:0,93,255:40,0 chr1 29631872 . C . PASS END=29631908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1453:0,96,255:40,0 chr1 29631909 . A G, 45.80 PASS DP=46;MQ=250.00;MQRankSum=5.661;ReadPosRankSum=1.047;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,18,0:0.391,0.000:46:19,11,0:9,7,0:45:81,0,50,615,965,1580:255,0,255:24,0:4.5798e+01,1.3616e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,12,9,9:15,13,8,10 chr1 29631910 . T . PASS END=29631917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,102,1598:0,102,255:40,0 chr1 29631918 . A . PASS END=29631918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1427:0,74,255:38,0 chr1 29631919 . C . PASS END=29631940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1374:0,101,255:38,0 chr1 29633641 . A . PASS END=29633658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,153,255:40,0 chr1 29637256 . G . PASS END=29637292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1235:0,91,255:36,0 chr1 29637968 . G . PASS END=29637973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1178:0,93,255:32,0 chr1 29637974 . A . PASS END=29637974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 29637975 . G . PASS END=29637981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr1 29637982 . A . PASS END=29637982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1115:0,69,255:32,0 chr1 29637983 . T . PASS END=29638039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:34:0,84,1260:0,94,255:36,0 chr1 29638040 . T . PASS END=29638040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:28,0 chr1 29638041 . C . PASS END=29638056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1141:0,80,255:32,0 chr1 29638057 . G . PASS END=29638057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 29638058 . T . PASS END=29638065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1200:0,83,255:34,0 chr1 29638155 . G . PASS END=29638271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:34:0,84,1260:0,95,255:40,0 chr1 29639064 . A . PASS END=29639064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 29639065 . G . PASS END=29639088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:18,0 chr1 29639089 . T . PASS END=29639089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 29639090 . C . PASS END=29639112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,668:0,44,255:19,0 chr1 29639113 . G . PASS END=29639119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 29639120 . G . PASS END=29639130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 29639131 . C . PASS END=29639157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 29639158 . T . PASS END=29639158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 29639159 . C . PASS END=29639171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 29639172 . A . PASS END=29639202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:19,0 chr1 29639203 . T . PASS END=29639212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 29639213 . C . PASS END=29639213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr1 29639214 . T . PASS END=29639218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 29641884 . C . PASS END=29641988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1218:0,86,255:40,0 chr1 29641989 . C . PASS END=29641989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:36,0 chr1 29641990 . T . PASS END=29642018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,92,255:37,0 chr1 29642019 . G . PASS END=29642019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 29642514 . G . PASS END=29642517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:28,0 chr1 29642518 . A . PASS END=29642518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 29642519 . G . PASS END=29642529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1197:0,91,255:38,0 chr1 29642530 . T . PASS END=29642530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:37,0 chr1 29642531 . T . PASS END=29642663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:39:0,84,1393:0,84,255:40,0 chr1 29644260 . A . PASS END=29644261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 29644262 . G . PASS END=29644262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 29644263 . C . PASS END=29644264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 29644265 . G . PASS END=29644275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 29644276 . C . PASS END=29644290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,63,255:24,0 chr1 29644291 . T . PASS END=29644291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 29644292 . G . PASS END=29644296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 29644297 . A . PASS END=29644297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 29644298 . G . PASS END=29644301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,961:0,65,255:26,0 chr1 29644302 . A . PASS END=29644318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:28,0 chr1 29644319 . C . PASS END=29644333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,955:0,78,255:26,0 chr1 29644334 . G . PASS END=29644336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 29644337 . C . PASS END=29644337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 29644338 . C . PASS END=29644339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 29644340 . C . PASS END=29644346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 29644347 . G . PASS END=29644365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1040:0,87,255:30,0 chr1 29644366 . G . PASS END=29644366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 29644367 . C . PASS END=29644369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29644370 . C . PASS END=29644370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 29644371 . C . PASS END=29644371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29644372 . T . PASS END=29644372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:25,0 chr1 29644373 . G . PASS END=29644373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 29644374 . C . PASS END=29644387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 29644388 . C . PASS END=29644388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 29644389 . A . PASS END=29644408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:21,0 chr1 29644409 . C . PASS END=29644417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:19,0 chr1 29644418 . T . PASS END=29644433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:12:0,30,450:0,34,255:13,0 chr1 29647197 . A . PASS END=29647197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 29647198 . G . PASS END=29647238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:26,0 chr1 29647239 . C . PASS END=29647244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 29647245 . A . PASS END=29647245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 29647246 . G . PASS END=29647272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1141:0,90,255:32,0 chr1 29647273 . T . PASS END=29647273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 29647274 . C . PASS END=29647299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1155:0,90,255:31,0 chr1 29647300 . T . PASS END=29647331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 29647332 . G . PASS END=29647332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 29647333 . C . PASS END=29647337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 29649883 . C . PASS END=29649903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,878:0,61,255:26,0 chr1 29649904 . G . PASS END=29649904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 29649905 . A . PASS END=29649905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 29649906 . G . PASS END=29649920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 29649921 . A . PASS END=29649921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:27,0 chr1 29649922 . T . PASS END=29649923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 29649924 . T . PASS END=29649924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:26,0 chr1 29649925 . G . PASS END=29649934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 29649935 . A . PASS END=29649935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 29649936 . G . PASS END=29649941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 29649942 . G . PASS END=29649942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 29649943 . T . PASS END=29649948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,920:0,84,255:28,0 chr1 29649949 . T . PASS END=29649949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 29649950 . C . PASS END=29649960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 29649961 . G . PASS END=29649982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,74,255:26,0 chr1 29649983 . T . PASS END=29649988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 29649989 . G . PASS END=29650005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,64,255:25,0 chr1 29650006 . C . PASS END=29650008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:20,0 chr1 29650143 . T . PASS END=29650162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 29650163 . G . PASS END=29650163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 29650164 . G . PASS END=29650164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 29650165 . T . PASS END=29650165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 29650166 . G . PASS END=29650204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,845:0,69,255:25,0 chr1 29650205 . C . PASS END=29650205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 29650206 . A . PASS END=29650226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 29650227 . T . PASS END=29650228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,613:0,58,255:22,0 chr1 29650229 . C . PASS END=29650268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:24,0 chr1 29650269 . A . PASS END=29650280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,50,255:19,0 chr1 29650281 . C . PASS END=29650300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:8:0,24,310:0,24,255:9,0 chr1 29651703 . A . PASS END=29651705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:18,0 chr1 29651706 . C . PASS END=29651707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:17,0 chr1 29651708 . G . PASS END=29651708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 29651709 . G . PASS END=29651709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,703:0,66,255:22,0 chr1 29651710 . G . PASS END=29651710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 29651711 . G . PASS END=29651714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 29651715 . A . PASS END=29651717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 29651718 . C . PASS END=29651725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,901:0,61,255:26,0 chr1 29651726 . C . PASS END=29651726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 29651727 . C . PASS END=29651727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 29651728 . T . PASS END=29651729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr1 29651730 . C . PASS END=29651731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr1 29651732 . G . PASS END=29651732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 29651733 . C . PASS END=29651733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 29651734 . G . PASS END=29651735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 29651736 . C . PASS END=29651736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 29651737 . T . PASS END=29651737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 29651738 . G . PASS END=29651738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 29651739 . C . PASS END=29651739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 29651740 . G . PASS END=29651740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 29651741 . C . PASS END=29651741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 29651742 . C . PASS END=29651742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:29,0 chr1 29651743 . A . PASS END=29651745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 29651746 . G . PASS END=29651752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:29,0 chr1 29651753 . A . PASS END=29651753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:27,0 chr1 29651754 . G . PASS END=29651762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1133:0,82,255:31,0 chr1 29651763 . C . PASS END=29651763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr1 29651764 . T . PASS END=29651809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1123:0,80,255:33,0 chr1 29651810 . A . PASS END=29651810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 29651811 . C . PASS END=29651819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 29651820 . C . PASS END=29651820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 29651821 . A . PASS END=29651823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 29651824 . A . PASS END=29651824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,904:0,73,255:27,0 chr1 29651825 . T . PASS END=29651825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,987:0,59,255:27,0 chr1 29651826 . G . PASS END=29651826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,881:0,34,255:26,0 chr1 29651827 . G . PASS END=29651838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,68,255:25,0 chr1 29652111 . G . PASS END=29652119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:31,0 chr1 29652120 . C . PASS END=29652120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 29652121 . A . PASS END=29652121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 29652122 . C . PASS END=29652122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 29652123 . T . PASS END=29652125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 29652126 . T . PASS END=29652126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 29652127 . G . PASS END=29652132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 29652133 . A . PASS END=29652133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 29652134 . T . PASS END=29652140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 29652141 . C . PASS END=29652173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,978:0,67,255:26,0 chr1 31186429 . T . PASS END=31186478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,127,255:40,0 chr1 31187094 . G . PASS END=31187099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:28,0 chr1 31187100 . T . PASS END=31187100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 31187101 . G . PASS END=31187102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31187103 . T . PASS END=31187103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 31187104 . C . PASS END=31187126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 31187127 . C . PASS END=31187127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 31187128 . T . PASS END=31187141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1050:0,90,255:31,0 chr1 31187142 . T . PASS END=31187142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 31187143 . C . PASS END=31187143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1071:0,49,255:29,0 chr1 31187144 . A . PASS END=31187160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:30,0 chr1 31187161 . A . PASS END=31187174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr1 31188004 . C . PASS END=31188144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:33:0,84,1260:0,88,255:40,0 chr1 31188145 . A . PASS END=31188152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,82,255:26,0 chr1 31188153 . A . PASS END=31188156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:27,0 chr1 31188756 . C . PASS END=31189030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:84:35:0,84,1375:0,84,255:40,0 chr1 31189031 . A . PASS END=31189031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1396:0,65,255:36,0 chr1 31189032 . G . PASS END=31189036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1406:0,81,255:40,0 chr1 31189037 . T . PASS END=31189037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1458:0,74,255:39,0 chr1 31189038 . C . PASS END=31189172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,87,255:40,0 chr1 31189637 . C . PASS END=31189645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:31,0 chr1 31189646 . T . PASS END=31189646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1004:0,79,255:31,0 chr1 31189647 . C . PASS END=31189721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:32:0,81,1202:0,81,255:38,0 chr1 31189722 . C . PASS END=31189722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 31189723 . T . PASS END=31189746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:36,0 chr1 31189747 . C . PASS END=31189749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr1 31189750 . A . PASS END=31189750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:23,0 chr1 31189751 . G . PASS END=31189760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:23,0 chr1 31189761 . C . PASS END=31189762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 31191582 . C . PASS END=31191582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 31191583 . G . PASS END=31191583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 31191584 . C . PASS END=31191584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 31191585 . A . PASS END=31191585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 31191586 . G . PASS END=31191586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 31191587 . A . PASS END=31191590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 31191591 . C . PASS END=31191591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 31191592 . C . PASS END=31191600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,652:0,41,255:19,0 chr1 31191601 . C . PASS END=31191601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 31191602 . T . PASS END=31191602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:18,0 chr1 31191603 . T . PASS END=31191603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 31191604 . C . PASS END=31191612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:19,0 chr1 31191613 . C . PASS END=31191620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 31191621 . T . PASS END=31191621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 31191622 . G . PASS END=31191623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 31191624 . C . PASS END=31191624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 31191625 . G . PASS END=31191628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,801:0,65,255:26,0 chr1 31191629 . T . PASS END=31191632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 31191633 . T . PASS END=31191633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 31191634 . C . PASS END=31191636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 31191637 . C . PASS END=31191650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,885:0,64,255:26,0 chr1 31191651 . G . PASS END=31191651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 31191652 . T . PASS END=31191673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 31191674 . A . PASS END=31191674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:22,0 chr1 31191675 . T . PASS END=31191682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 31191683 . A . PASS END=31191683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 31191684 . G . PASS END=31191703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,945:0,65,255:26,0 chr1 31191704 . C . PASS END=31191705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 31191706 . C . PASS END=31191706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 31191707 . A . PASS END=31191707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31191708 . C . PASS END=31191709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 31191710 . C . PASS END=31191713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:27,0 chr1 31191714 . T . PASS END=31191714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 31191715 . G . PASS END=31191717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 31191718 . G . PASS END=31191734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,945:0,64,255:26,0 chr1 31191735 . T . PASS END=31191741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 31191742 . G . PASS END=31191759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 31191760 . C . PASS END=31191760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 31191761 . T . PASS END=31191763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 31191764 . A . PASS END=31191764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 31191765 . C . PASS END=31191766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 31191767 . C . PASS END=31191789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 31191790 . C . PASS END=31191790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31191791 . A . PASS END=31191793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31191794 . A . PASS END=31191794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 31191795 . C . PASS END=31191800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31191801 . C . PASS END=31191804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31194252 . C . PASS END=31194265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,917:0,75,255:26,0 chr1 31194266 . G . PASS END=31194291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,986:0,81,255:33,0 chr1 31194292 . T . PASS END=31194292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:32,0 chr1 31194293 . C . PASS END=31194363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1069:0,83,255:37,0 chr1 31194364 . C . PASS END=31194364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:34,0 chr1 31194365 . G . PASS END=31194365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 31194366 . G . PASS END=31194366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 31194367 . C . PASS END=31194367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 31194368 . G . PASS END=31194368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr1 31194369 . C . PASS END=31194381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,98,255:36,0 chr1 31194382 . A . PASS END=31194426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,856:0,69,255:25,0 chr1 31194427 . A . PASS END=31194427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 31194428 . C . PASS END=31194455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:26,0 chr1 31194456 . C . PASS END=31194456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 31194457 . C . PASS END=31194457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 31194458 . G . PASS END=31194458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 31194459 . G . PASS END=31194463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 31194464 . C . PASS END=31194464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:21,0 chr1 31194465 . A . PASS END=31194482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 31194483 . C . PASS END=31194486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 31194487 . T . PASS END=31194490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31194491 . T . PASS END=31194493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 31194494 . C . PASS END=31194494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 31194495 . C . PASS END=31194495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 31194496 . T . PASS END=31194496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:19,0 chr1 31194497 . G . PASS END=31194512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,590:0,40,255:19,0 chr1 31194513 . C . PASS END=31194513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 31194514 . A . PASS END=31194535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:18,0 chr1 31194536 . G . PASS END=31194536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 31194537 . A . PASS END=31194540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 31194541 . C . PASS END=31194541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 31194542 . T . PASS END=31194556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 31194557 . C . PASS END=31194557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 31194558 . A . PASS END=31194561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr1 31194562 . A . PASS END=31194566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 31194567 . C . PASS END=31194598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 31196305 . C . PASS END=31196313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 31196314 . G . PASS END=31196337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr1 31196338 . G . PASS END=31196348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,821:0,63,255:22,0 chr1 31196349 . A . PASS END=31196349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 31196350 . G . PASS END=31196376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 31196377 . T . PASS END=31196398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,568:0,40,255:19,0 chr1 31206675 . T . PASS END=31206704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:26,0 chr1 31206705 . G . PASS END=31206757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1015:0,81,255:34,0 chr1 31206758 . G . PASS END=31206758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 31206759 . G . PASS END=31206764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1056:0,90,255:30,0 chr1 31208020 . C . PASS END=31208112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:43:0,91,1543:0,91,255:40,0 chr1 31210451 . C . PASS END=31210546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:60:0,120,1800:0,121,255:40,0 chr1 31211787 . C . PASS END=31211909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:37:0,95,1308:0,95,255:40,0 chr1 31212656 . A . PASS END=31212689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1211:0,83,255:36,0 chr1 31212690 . G . PASS END=31212690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 31212691 . G . PASS END=31212779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,87,255:40,0 chr1 31212780 . C . PASS END=31212784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 31214487 . C . PASS END=31214492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1164:0,90,255:31,0 chr1 31214493 . T . PASS END=31214493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 31214494 . A . PASS END=31214523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1109:0,80,255:39,0 chr1 31214524 . A . PASS END=31214524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 31214525 . A . PASS END=31214563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,111,1665:0,117,255:40,0 chr1 31215303 . C . PASS END=31215304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 31215305 . A . PASS END=31215305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 31215306 . T . PASS END=31215306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 31215307 . C . PASS END=31215312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 31215313 . G . PASS END=31215313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 31215314 . T . PASS END=31215326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 31215327 . A . PASS END=31215327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 31215328 . G . PASS END=31215335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:17,0 chr1 31215336 . A . PASS END=31215336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 31215337 . G . PASS END=31215342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr1 31215343 . C . PASS END=31215344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 31215345 . T . PASS END=31215363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 31215364 . T . PASS END=31215364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 31215365 . G . PASS END=31215368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:15,0 chr1 31215369 . G . PASS END=31215369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 31215370 . C . PASS END=31215378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 31215379 . C . PASS END=31215379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 31215380 . A . PASS END=31215391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 31215392 . A . PASS END=31215395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 31215396 . T . PASS END=31215396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:11,0 chr1 31230506 . C . PASS END=31230509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1158:0,93,255:32,0 chr1 31230510 . T . PASS END=31230510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 31230511 . G . PASS END=31230511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:31,0 chr1 31230512 . G . PASS END=31230519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:34,0 chr1 31230520 . C . PASS END=31230520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr1 31230521 . C . PASS END=31230532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr1 31230533 . T . PASS END=31230533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:33,0 chr1 31230534 . G . PASS END=31230558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1255:0,86,255:35,0 chr1 31230559 . A . PASS END=31230559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 31230560 . G . PASS END=31230561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 31230562 . T . PASS END=31230562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1187:0,56,255:34,0 chr1 31230563 . C . PASS END=31230564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 31230565 . G . PASS END=31230565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 31230566 . G . PASS END=31230568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1280:0,69,255:34,0 chr1 31230569 . G . PASS END=31230569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:38:0,93,1395:0,98,255:31,0 chr1 31230570 . A . PASS END=31230575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:31,0 chr1 31230576 . G . PASS END=31230576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 31230577 . A . PASS END=31230578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:67:35:0,67,1258:0,67,255:30,0 chr1 31230579 . A . PASS END=31230581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 31230582 . C . PASS END=31230582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:27,1 chr1 31230583 . G . PASS END=31230583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1155:0,25,255:28,0 chr1 31230584 . G . PASS END=31230588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr1 31230589 . C . PASS END=31230589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 31230590 . C . PASS END=31230592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:27,0 chr1 31346058 . C . PASS END=31346167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:32:0,87,1202:0,87,255:40,0 chr1 31346168 . G . PASS END=31346170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 31346171 . G . PASS END=31346194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:29,0 chr1 31346195 . G . PASS END=31346210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 31346211 . G . PASS END=31346212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 31346213 . C . PASS END=31346214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 31346215 . A . PASS END=31346224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:18,0 chr1 31347144 . C . LowGQ END=31347151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,135:14,0,165:8,1 chr1 31347152 . A . PASS END=31347191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 31347192 . C . PASS END=31347193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 31347194 . G . PASS END=31347219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 31347220 . G . PASS END=31347220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 31347221 . T . PASS END=31347221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 31347222 . C . PASS END=31347228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 31347229 . G . PASS END=31347238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 31347239 . G . PASS END=31347239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 31347240 . G . PASS END=31347241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 31347242 . C . PASS END=31347247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 31347248 . C . PASS END=31347248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 31347249 . C . PASS END=31347249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 31347250 . C . PASS END=31347265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 31347266 . G . PASS END=31347271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 31347272 . G . PASS END=31347272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 31347273 . A . PASS END=31347294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,454:0,42,255:19,0 chr1 31347295 . T . PASS END=31347305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 31347306 . C . PASS END=31347306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 31347307 . C . PASS END=31347313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 31347314 . T . PASS END=31347314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 31347315 . T . PASS END=31347336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 31347337 . C . PASS END=31347337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 31347338 . T . PASS END=31347338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31347339 . C . PASS END=31347343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 31347344 . T . PASS END=31347344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 31347345 . C . PASS END=31347358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,995:0,87,255:30,0 chr1 31347359 . T . PASS END=31347359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr1 31347360 . C . PASS END=31347361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 31347362 . C . PASS END=31347368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 31347369 . G . PASS END=31347371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 31347372 . C . PASS END=31347398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:29,0 chr1 31347399 . C T, 48.75 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=4.433;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:8,6,0:8,6,0:47:84,0,50,421,572,993:255,0,255:16,0:4.8751e+01,7.9730e-05,5.3000e+01,4.2117e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,6,6:10,6,8,4 chr1 31347400 . C . PASS END=31347405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31347406 . T . PASS END=31347429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 31347430 . T . PASS END=31347435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 31349399 . C . PASS END=31349401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31349402 . A . PASS END=31349472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:37,0 chr1 31349473 . G . PASS END=31349513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:26,0 chr1 31349514 . G . PASS END=31349514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 31349515 . C . PASS END=31349524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 31349525 . C . PASS END=31349525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:20,0 chr1 31349526 . A . PASS END=31349529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31349530 . T . PASS END=31349548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,706:0,57,255:19,0 chr1 31349549 . G . PASS END=31349550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31349551 . C . PASS END=31349551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 31349552 . C . PASS END=31349555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31349556 . A . PASS END=31349559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 31349560 . C . PASS END=31349560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31349561 . C . PASS END=31349600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,621:0,50,255:19,0 chr1 31349601 . C . PASS END=31349601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 31349602 . G . PASS END=31349629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 31349630 . A . PASS END=31349630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 31349631 . G . PASS END=31349636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31349637 . A . PASS END=31349644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31349645 . T . PASS END=31349645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 31349646 . A . PASS END=31349646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 31349647 . C . PASS END=31349647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 31349648 . G . PASS END=31349653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 31349654 . G . PASS END=31349661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:12:0,22,360:0,22,255:9,0 chr1 31349662 . T . LowGQ END=31349662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,335:3,0,255:8,0 chr1 31349663 . A . PASS END=31349675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,304:0,27,255:9,0 chr1 31349676 . G . PASS END=31349677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 31349678 . C . PASS END=31349678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 31349679 . G . PASS END=31349680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 31349681 . A . PASS END=31349681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 31349682 . A . PASS END=31349693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 31349694 . G . PASS END=31349694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:10,0 chr1 31349695 . C . PASS END=31349695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 31349696 . A . PASS END=31349702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr1 31349703 . C . PASS END=31349703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:8,0 chr1 31349704 . T . PASS END=31349709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 31349710 . T . PASS END=31349710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:6,0 chr1 31349711 . G . PASS END=31349711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 31349712 . G . PASS END=31349721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 31349722 . C . PASS END=31349737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,274:0,24,255:9,0 chr1 31349738 . G . PASS END=31349738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 31349739 . G . PASS END=31349756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr1 31349757 . G . PASS END=31349772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:13,0 chr1 31349773 . T . PASS END=31349787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:16,0 chr1 31349788 . T . PASS END=31349788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 31349789 . G . PASS END=31349800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,513:0,48,255:16,0 chr1 31349801 . G . PASS END=31349801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 31349802 . G . PASS END=31349816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,497:0,45,255:15,0 chr1 31349817 . T . PASS END=31349829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 31349830 . C . PASS END=31349898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,520:0,41,255:18,0 chr1 31349899 . T . PASS END=31349899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:16,0 chr1 31349900 . G . PASS END=31349920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 31349921 . G . PASS END=31349926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 31349927 . C . PASS END=31349929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 31349930 . C . PASS END=31349931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 31349932 . C . PASS END=31349948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 31349949 . A . PASS END=31349949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 31349950 . C . PASS END=31349954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:15,0 chr1 31349955 . A . PASS END=31349955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:13,0 chr1 31349956 . G . PASS END=31349968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,559:0,40,255:19,0 chr1 31349969 . G . PASS END=31349978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:24,0 chr1 31349979 . A . PASS END=31349979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,699:0,39,255:22,0 chr1 31349980 . T . PASS END=31350009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,870:0,62,255:25,0 chr1 31350010 . A . PASS END=31350010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 31350011 . G . PASS END=31350012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 31350013 . C . PASS END=31350029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,903:0,81,255:29,0 chr1 31350030 . A . PASS END=31350030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:27,0 chr1 31350031 . G . PASS END=31350047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1149:0,87,255:31,0 chr1 31350048 . C . PASS END=31350048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 31350049 . T . PASS END=31350073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 31350074 . T . PASS END=31350091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,960:0,68,255:26,0 chr1 31350092 . C . PASS END=31350094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 31351470 . A . PASS END=31351587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:51:0,88,1800:0,88,255:40,0 chr1 31351776 . C . PASS END=31351787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 31360453 . C . PASS END=31360554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,114,1698:0,114,255:40,0 chr1 31381296 . C . LowGQ END=31381348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,16:2,0 chr1 31381349 . C . LowDepth;LowGQ END=31381433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 31382463 . T . PASS END=31382567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:38:0,87,1305:0,114,255:40,0 chr1 31406058 . T . PASS END=31406060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 31406061 . G . PASS END=31406061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 31406062 . A . PASS END=31406067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,901:0,64,255:26,0 chr1 31406068 . C . PASS END=31406070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1143:0,96,255:32,0 chr1 31406071 . T . PASS END=31406071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,993:0,41,255:30,0 chr1 31406072 . T . PASS END=31406073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 31406074 . G . PASS END=31406074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 31406075 . G . PASS END=31406189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:32:0,91,1227:0,91,255:40,0 chr1 31409490 . C . PASS END=31409644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1182:0,93,255:40,0 chr1 31409645 . T . PASS END=31409669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,739:0,62,255:26,0 chr1 31409670 . C . PASS END=31409670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 31409671 . T . PASS END=31409671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31409672 . C . PASS END=31409682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 31413998 . C . PASS END=31414119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:57:0,120,1800:0,156,255:40,0 chr1 31414769 . A . PASS END=31414953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,105,1575:0,110,255:40,0 chr1 31414954 . G . PASS END=31414954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr1 31414955 . T . PASS END=31414970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:33,0 chr1 31418193 . C . PASS END=31418330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,110,1528:0,110,255:40,0 chr1 31422974 . A . PASS END=31423022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1147:0,90,255:37,0 chr1 31423023 . C . PASS END=31423023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 31423024 . G . PASS END=31423027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 31423028 . G . PASS END=31423028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1288:0,37,255:35,0 chr1 31423029 . C . PASS END=31423062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1305:0,98,255:40,0 chr1 31423063 . C . PASS END=31423066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 31423067 . A . PASS END=31423081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 31423082 . A . PASS END=31423086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 31423087 . G . PASS END=31423088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 31423089 . T . PASS END=31423104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,71,255:26,0 chr1 31423105 . C . PASS END=31423105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 31423106 . A . PASS END=31423108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 31425081 . T . PASS END=31425100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,532:0,51,255:19,0 chr1 31425101 . C . PASS END=31425105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 31425106 . T . PASS END=31425106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 31425107 . T . PASS END=31425107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 31425108 . A . PASS END=31425111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 31425112 . A . PASS END=31425120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr1 31425121 . A . PASS END=31425123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 31425124 . A . PASS END=31425124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 31425125 . T . PASS END=31425128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:33,0 chr1 31425129 . T . PASS END=31425129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1062:0,30,255:26,0 chr1 31425130 . T . PASS END=31425136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1202:0,86,255:29,0 chr1 31425137 . C . PASS END=31425137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr1 31425138 . A . PASS END=31425210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:36,0 chr1 31426561 . C . PASS END=31426578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 31426579 . T . PASS END=31426579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 31426580 . G . PASS END=31426583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 31426584 . A . PASS END=31426584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 31426585 . A . PASS END=31426609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:31,0 chr1 31426610 . C . PASS END=31426610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 31426611 . C . PASS END=31426612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 31426613 . G . PASS END=31426613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 31426614 . C . PASS END=31426667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1078:0,80,255:31,0 chr1 31426668 . G . PASS END=31426668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:29,0 chr1 31426669 . C . PASS END=31426719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1073:0,83,255:33,0 chr1 31426720 . A . PASS END=31426720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:30,0 chr1 31426721 . G . PASS END=31426732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1186:0,86,255:31,0 chr1 31426733 . G . PASS END=31426733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 31426734 . G . PASS END=31426747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 31426748 . A . PASS END=31426761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 31426762 . C . PASS END=31426780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 31426781 . C . PASS END=31426781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr1 31426782 . G . PASS END=31426794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 31426795 . G . PASS END=31426813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 31426814 . C . PASS END=31426828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 31437521 . C . PASS END=31437522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 31437523 . A . PASS END=31437523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 31437524 . G . PASS END=31437538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1056:0,90,255:33,0 chr1 31437539 . A . PASS END=31437539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,811:0,65,255:31,0 chr1 31437540 . G . PASS END=31437562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1189:0,84,255:40,0 chr1 31437563 . G . PASS END=31437563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1309:0,76,255:38,0 chr1 31437564 . A . PASS END=31437566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:41:0,92,1295:0,92,255:40,0 chr1 31437567 . T . PASS END=31437567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:40:41:0,40,1119:0,40,255:36,0 chr1 31437568 . G . PASS END=31437568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1260:0,73,255:38,0 chr1 31437569 . G . PASS END=31437569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:89:41:0,89,1232:0,89,255:37,0 chr1 31437570 . T . PASS END=31437570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1260:0,73,255:36,0 chr1 31437571 . G . PASS END=31437571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 31437572 . T . PASS END=31437572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:35:41:0,35,1231:0,35,255:35,0 chr1 31437573 . C . PASS END=31437607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,105,1482:0,107,255:40,0 chr1 31437608 . T . PASS END=31437608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 31437609 . G . PASS END=31437632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1127:0,82,255:35,0 chr1 31437633 . A . PASS END=31437633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:27,0 chr1 31437634 . A . PASS END=31437662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1164:0,83,255:31,0 chr1 31437663 . A . PASS END=31437664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:29,0 chr1 31437665 . T . PASS END=31437665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 31437666 . G . PASS END=31437674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 31437675 . G . PASS END=31437675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 31437676 . C . PASS END=31437677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:27:0,78,1170:0,81,255:26,0 chr1 31437678 . G . PASS END=31437712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1039:0,80,255:30,0 chr1 31437713 . T . PASS END=31437749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,793:0,69,255:26,0 chr1 31437750 . G . PASS END=31437750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 31437751 . T . PASS END=31437757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 31438829 . C . PASS END=31438830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 31438831 . G . PASS END=31438831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 31438832 . C . PASS END=31438833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 31438834 . G . PASS END=31438834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr1 31438835 . T . PASS END=31438835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 31438836 . T . PASS END=31438836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 31438837 . C . PASS END=31438839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 31438840 . A . PASS END=31438840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 31438841 . A . PASS END=31438843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 31438844 . C . PASS END=31438847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31438848 . A . PASS END=31438849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 31438850 . G . PASS END=31438851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31438852 . G . PASS END=31438852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 31438853 . C . PASS END=31438853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31438854 . G . PASS END=31438854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 31438855 . G . PASS END=31438860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 31438861 . A . PASS END=31438861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 31438862 . G . PASS END=31438885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr1 31438886 . T . PASS END=31438886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 31438887 . T . PASS END=31438915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,612:0,41,255:18,0 chr1 31438916 . G . PASS END=31438919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 31438920 . A . PASS END=31438920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 31438921 . G . PASS END=31438940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr1 31438941 . G . PASS END=31438942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 31438943 . T . PASS END=31438943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:22,0 chr1 31438944 . G . PASS END=31438964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr1 31438965 . A . PASS END=31438972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 31438973 . T . PASS END=31438980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:26,0 chr1 31438981 . A . PASS END=31438981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,974:0,54,255:25,0 chr1 31438982 . A . PASS END=31438996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 31438997 . G . PASS END=31438998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31438999 . T . PASS END=31439001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31439002 . T . PASS END=31439010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 31439011 . T . PASS END=31439012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31439013 . C . PASS END=31439013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 31439014 . T . PASS END=31439014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 31439015 . G . PASS END=31439020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 31439021 . G . PASS END=31439021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:28,0 chr1 31439022 . C . PASS END=31439034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:32,0 chr1 31439035 . T . PASS END=31439035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 31439036 . G . PASS END=31439045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:33,0 chr1 31439046 . T . PASS END=31439046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1171:0,55,255:31,0 chr1 31439047 . A . PASS END=31439068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1185:0,80,255:33,0 chr1 31439069 . T . PASS END=31439069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 31439070 . T . PASS END=31439072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 31439073 . T . PASS END=31439092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 31439093 . C . PASS END=31439093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 31439094 . T . PASS END=31439097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 31439098 . T . PASS END=31439120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 31439121 . A . PASS END=31439121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 31439122 . A . PASS END=31439125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 31440014 . C . PASS END=31440020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1062:0,87,255:31,0 chr1 31440021 . T . PASS END=31440021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 31440022 . G . PASS END=31440028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr1 31440029 . A . PASS END=31440029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 31440030 . G . PASS END=31440032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1127:0,93,255:32,0 chr1 31440033 . A . PASS END=31440033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:32,0 chr1 31440034 . C . PASS END=31440068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:33:0,89,1239:0,89,255:38,0 chr1 31440069 . A . PASS END=31440069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:37,0 chr1 31440070 . G . PASS END=31440115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1298:0,81,255:40,0 chr1 31440116 . C . PASS END=31440116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1271:0,45,255:36,0 chr1 31440117 . A . PASS END=31440118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1319:0,62,255:37,0 chr1 31440119 . T . PASS END=31440126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:38:0,84,1256:0,84,255:37,0 chr1 31440127 . T . PASS END=31440127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:32,0 chr1 31440128 . A . PASS END=31440138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,99,255:32,0 chr1 31440139 . G . PASS END=31440157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,64,255:25,0 chr1 31441201 . C . PASS END=31441234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1080:0,80,255:37,0 chr1 31441235 . A . PASS END=31441235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:35,0 chr1 31441236 . A . PASS END=31441339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,108,1426:0,111,255:40,0 chr1 31447498 . C . PASS END=31447503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:23,0 chr1 31447504 . C . PASS END=31447504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 31447505 . T . PASS END=31447517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 31447518 . C . PASS END=31447551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1125:0,86,255:35,0 chr1 31447552 . T . PASS END=31447552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:33,0 chr1 31447553 . G . PASS END=31447620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1305:0,105,255:40,0 chr1 31447621 . A . PASS END=31447622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:29,0 chr1 31447623 . A . PASS END=31447623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1316:0,45,255:26,0 chr1 31447624 . A . PASS END=31447632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,78,255:26,0 chr1 31447633 . A . PASS END=31447633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr1 31447634 . G . PASS END=31447649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:23,0 chr1 31452909 . C . PASS END=31452920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:26,0 chr1 31452921 . C . PASS END=31452930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:30,0 chr1 31452931 . T . PASS END=31452931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 31452932 . C . PASS END=31453025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:30:0,90,1103:0,90,255:40,0 chr1 31454159 . C . PASS END=31454164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 31454165 . G . PASS END=31454165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 31454166 . C . PASS END=31454168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 31454169 . C . PASS END=31454172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 31454173 . T . PASS END=31454192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 31454193 . C . PASS END=31454205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 31454206 . G . PASS END=31454208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31454209 . G . PASS END=31454214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31454215 . A . PASS END=31454233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 31454234 . C . PASS END=31454238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 31454239 . G . PASS END=31454252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 31465234 . T . PASS END=31465234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 31465237 . C . PASS END=31465239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 31465240 . T . PASS END=31465240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 31465241 . T . PASS END=31465266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,805:0,69,255:25,0 chr1 31465267 . C . PASS END=31465267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 31465268 . A . PASS END=31465274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:26,0 chr1 31465275 . C . PASS END=31465277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:28,0 chr1 31465278 . C . PASS END=31465278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 31465279 . T . PASS END=31465306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1033:0,84,255:37,0 chr1 31465307 . G . PASS END=31465307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:37,0 chr1 31465308 . A . PASS END=31465311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1374:0,114,255:38,0 chr1 31465312 . A . PASS END=31465312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 31465313 . T . PASS END=31465349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,100,1229:0,100,255:40,0 chr1 31465350 . G . PASS END=31465350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:33,0 chr1 31465351 . G . PASS END=31465370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,104,255:36,0 chr1 31465371 . A . PASS END=31465372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:35:0,78,1170:0,105,255:26,0 chr1 31465373 . T . PASS END=31465376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr1 31465377 . T . PASS END=31465381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 31465382 . G . PASS END=31465387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 31465388 . T . PASS END=31465396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 31465397 . G . PASS END=31465403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 31465404 . C . PASS END=31465419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,70,255:25,0 chr1 31465420 . C . PASS END=31465422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 31465423 . C . PASS END=31465423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:19,0 chr1 31465424 . T . PASS END=31465452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 31465453 . T . PASS END=31465453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 31465454 . G . PASS END=31465457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 31465458 . C . LowGQ END=31465458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,427:7,0,255:14,0 chr1 31465459 . C . PASS END=31465471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 31465472 . T . PASS END=31465472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:14,0 chr1 31465473 . C . PASS END=31465475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr1 31465476 . T . PASS END=31465476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 31465477 . A . PASS END=31465482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 31465483 . G . PASS END=31465483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 31465484 . T . PASS END=31465487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 31465488 . G . PASS END=31465488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 31465489 . G . PASS END=31465491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 31465492 . A . PASS END=31465493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31465494 . T . PASS END=31465494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 31465495 . A . PASS END=31465507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 31467901 . C . PASS END=31467969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:42:0,93,1400:0,93,255:40,0 chr1 31467970 . C . PASS END=31467970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,10:75:45:75:0,45,2068:0,45,255:40,0 chr1 31467971 . C . PASS END=31467971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,5:75:83:75:0,83,2211:0,83,255:40,0 chr1 31467972 . C . PASS END=31467972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,8:75:56:75:0,56,2211:0,56,255:40,0 chr1 31467973 . T . PASS END=31467973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,191,255:40,0 chr1 31467974 . C . PASS END=31467974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,6:74:71:74:0,71,2165:0,71,255:40,0 chr1 31467975 . C . PASS END=31468067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:91:47:0,91,1709:0,91,255:40,0 chr1 31478700 . A . PASS END=31478707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:18,0 chr1 31478708 . C . PASS END=31478708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr1 31478709 . T . PASS END=31478710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 31478711 . T . PASS END=31478713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr1 31478714 . T . PASS END=31478715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 31478716 . A . PASS END=31478716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 31478717 . G . PASS END=31478717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 31478718 . A . PASS END=31478718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 31478719 . C . PASS END=31478720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:21:18:0,21,587:0,21,255:17,0 chr1 31478721 . G . PASS END=31478722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 31478723 . A . PASS END=31478723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 31478724 . A . PASS END=31478731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr1 31478732 . G . PASS END=31478733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 31478734 . G . PASS END=31478737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 31478738 . A . PASS END=31478758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr1 31478759 . T . PASS END=31478760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31478761 . C . PASS END=31478773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 31478774 . C . PASS END=31478776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 31478777 . C . PASS END=31478778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 31478779 . C . PASS END=31478780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1185:0,80,255:27,0 chr1 31478781 . C . PASS END=31478782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 31478783 . C . PASS END=31478785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31478786 . A . PASS END=31478787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 31478788 . C . PASS END=31478795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 31478796 . C . PASS END=31478819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 31478820 . C . PASS END=31478839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:28,0 chr1 31478840 . G . PASS END=31478853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,856:0,72,255:26,0 chr1 31478854 . A . PASS END=31478854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 31478855 . T . PASS END=31478867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 31478868 . A . PASS END=31478868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 31478869 . A . PASS END=31478876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 31478877 . A . PASS END=31478877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 31478878 . T . PASS END=31478878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 31479841 . C . PASS END=31479949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,102,1530:0,109,255:40,0 chr1 31501643 . C . PASS END=31501711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,144,255:40,0 chr1 31528216 . T . PASS END=31528227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,123,255:40,0 chr1 31532051 . C . PASS END=31532051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 31532052 . T . PASS END=31532071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,853:0,66,255:26,0 chr1 31532072 . A . PASS END=31532196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1062:0,86,255:39,0 chr1 31532197 . C . PASS END=31532197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 31532198 . T . PASS END=31532210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:34,0 chr1 31532211 . G . PASS END=31532211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 31532212 . A . PASS END=31532220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:28,0 chr1 31532221 . C . PASS END=31532228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:24,0 chr1 31532229 . G . PASS END=31532231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:27,0 chr1 31532232 . T . PASS END=31532232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 31532233 . G . PASS END=31532236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:28,0 chr1 31532237 . C . PASS END=31532237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:27,0 chr1 31532238 . C . PASS END=31532248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 31532249 . A . PASS END=31532250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,939:0,73,255:29,0 chr1 31532251 . C . PASS END=31532256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1133:0,90,255:30,0 chr1 31532257 . T . PASS END=31532258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:28,0 chr1 31532259 . G . PASS END=31532424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,83,255:40,0 chr1 31538536 . C . PASS END=31538585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1200:0,83,255:33,0 chr1 31538586 . C . PASS END=31538614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 31538615 . C . PASS END=31538617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 31538618 . C . PASS END=31538618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:18,0 chr1 31538619 . G . PASS END=31538629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 31538630 . C . PASS END=31538632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr1 31654550 . C . PASS END=31654553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 31654554 . C . PASS END=31654554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 31654555 . C . PASS END=31654559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 31654707 . G . PASS END=31654708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,962:0,67,255:24,0 chr1 31654709 . G . PASS END=31654710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 31654711 . A . PASS END=31654741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,930:0,62,255:26,0 chr1 31654742 . C . PASS END=31654743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 31654744 . G . PASS END=31654744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 31654745 . G . PASS END=31654746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 31654747 . G . PASS END=31654769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:25,0 chr1 31654770 . A . PASS END=31654788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:19,0 chr1 31655377 . A . PASS END=31655437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:41:0,94,1504:0,94,255:40,0 chr1 31656664 . T . PASS END=31656685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,754:0,62,255:25,0 chr1 31656686 . C . PASS END=31656694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 31656695 . G . PASS END=31656695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 31656696 . C . PASS END=31656766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1174:0,88,255:36,0 chr1 31656767 . G . PASS END=31656782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 31656783 . T . PASS END=31656787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 31656788 . A . PASS END=31656820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,914:0,62,255:26,0 chr1 31656821 . C . PASS END=31656861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 31658094 . C . PASS END=31658174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1142:0,85,255:38,0 chr1 31660897 . C . PASS END=31660898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31660899 . G . PASS END=31660904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1040:0,84,255:29,0 chr1 31660905 . G . PASS END=31660905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 31660906 . G . PASS END=31660908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:29,0 chr1 31660909 . C . PASS END=31660909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr1 31660910 . C . PASS END=31660910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 31660911 . G . PASS END=31660911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 31660912 . G . PASS END=31661034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:29:0,87,1080:0,87,255:40,0 chr1 31712341 . C . PASS END=31712344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31712345 . T . PASS END=31712351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:18,0 chr1 31712352 . A . PASS END=31712356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 31712357 . A . PASS END=31712357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:17,0 chr1 31712358 . A . PASS END=31712379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 31712380 . G . PASS END=31712386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 31712387 . T . PASS END=31712387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:8,0 chr1 31712388 . T . PASS END=31712393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr1 31712394 . T . PASS END=31712394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:15:12:0,15,225:0,36,255:5,0 chr1 31732919 . T . PASS END=31732968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,144,255:40,0 chr1 31734376 . T . PASS END=31734469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1172:0,85,255:40,0 chr1 31734470 . A . PASS END=31734479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,932:0,67,255:26,0 chr1 31740718 . C . PASS END=31740743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:44:0,85,1476:0,85,255:40,0 chr1 31740744 . G . PASS END=31740779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,111,1381:0,111,255:40,0 chr1 31742005 . C . PASS END=31742172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:47:0,120,1800:0,137,255:40,0 chr1 31744226 . C . PASS END=31744227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31744228 . G . PASS END=31744246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1101:0,80,255:34,0 chr1 31744247 . A . PASS END=31744247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:33,0 chr1 31744248 . C . PASS END=31744308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,103,1285:0,103,255:40,0 chr1 31744309 . A . PASS END=31744312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:38:0,62,1170:0,62,255:26,0 chr1 31744313 . T . PASS END=31744313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 31744314 . G . PASS END=31744334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,840:0,75,255:26,0 chr1 31744335 . C . PASS END=31744346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:20:0,45,675:0,60,255:18,0 chr1 31754221 . C . PASS END=31754221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 31754222 . T . PASS END=31754227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1089:0,82,255:32,0 chr1 31754228 . T . PASS END=31754228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1160:0,69,255:32,0 chr1 31754229 . C . PASS END=31754343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:33:0,93,1195:0,93,255:40,0 chr1 31762101 . C . PASS END=31762241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:27:0,81,905:0,81,255:40,0 chr1 31762242 . A . PASS END=31762242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1234:0,77,255:29,0 chr1 31762243 . T . PASS END=31762251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1141:0,80,255:28,0 chr1 31762252 . G . PASS END=31762252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 31762253 . C . PASS END=31762254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 31762255 . G . PASS END=31762266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,952:0,70,255:25,0 chr1 31764760 . C . PASS END=31764853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,114,1710:0,117,255:40,0 chr1 31766066 . A . PASS END=31766067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 31766068 . A . PASS END=31766068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1098:0,63,255:30,0 chr1 31766069 . T . PASS END=31766071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 31766072 . G . PASS END=31766074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:32,0 chr1 31766075 . G . PASS END=31766171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1181:0,84,255:40,0 chr1 31766172 . A . PASS END=31766172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 31766173 . A . PASS END=31766189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:34:0,92,1302:0,92,255:35,0 chr1 31766190 . A . PASS END=31766190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr1 31766191 . G . PASS END=31766195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 31769458 . C . PASS END=31769466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:32,0 chr1 31769467 . C . PASS END=31769467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:31,0 chr1 31769468 . A . PASS END=31769474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1209:0,96,255:33,0 chr1 31769475 . C . PASS END=31769475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:31,0 chr1 31769476 . C . PASS END=31769506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1166:0,86,255:34,0 chr1 31769507 . C . PASS END=31769507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:33,0 chr1 31769508 . C . PASS END=31769527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1081:0,85,255:35,0 chr1 31769528 . A . PASS END=31769529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1089:0,72,255:28,0 chr1 31769530 . C . PASS END=31769542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1141:0,80,255:30,0 chr1 31769543 . C . PASS END=31769543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr1 31769544 . G . PASS END=31769545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 31769546 . T . PASS END=31769546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr1 31769547 . T . PASS END=31769547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 31769548 . G . PASS END=31769548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 31769549 . A . PASS END=31769562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 31769563 . C . PASS END=31769572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1031:0,74,255:26,0 chr1 31769573 . C . PASS END=31769573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:21,0 chr1 31769574 . C . PASS END=31769582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:23,0 chr1 31769583 . T . PASS END=31769597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,743:0,50,255:20,0 chr1 31769598 . T . PASS END=31769598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 31769929 . A . PASS END=31769933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:15,0 chr1 31769934 . G . PASS END=31769934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 31769935 . A . PASS END=31769937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:16,0 chr1 31769938 . A . PASS END=31769938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 31769939 . A . PASS END=31769959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,515:0,45,255:19,0 chr1 31769960 . G . PASS END=31769971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 31769972 . C . PASS END=31769972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 31769973 . G . PASS END=31769983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 31769984 . G . PASS END=31770017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 31770018 . T . PASS END=31770031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 31770032 . G . PASS END=31770046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 31770047 . A . PASS END=31770060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,233:0,18,233:6,0 chr1 31782946 . A . PASS END=31783011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,129,255:40,0 chr1 31791042 . A . PASS END=31791083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,1:111:99:98:0,120,1800:0,255,255:40,0 chr1 31791956 . G . PASS END=31792013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,143,255:40,0 chr1 31810022 . G . PASS END=31810122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,126,255:40,0 chr1 31811804 . A . PASS END=31811895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,109,1800:0,109,255:40,0 chr1 31819487 . G . PASS END=31819665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:96:36:0,96,1321:0,98,255:40,0 chr1 31821676 . G . PASS END=31821773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:36:0,81,1195:0,81,255:40,0 chr1 31821774 . T . PASS END=31821774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:79:48:0,79,1348:0,79,255:40,0 chr1 31821775 . T . PASS END=31821803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1249:0,89,255:40,0 chr1 31821804 . T . PASS END=31821804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1070:0,55,255:29,0 chr1 31821805 . C . PASS END=31821821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:31,0 chr1 31833645 . T . PASS END=31833677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:92:0,120,1800:0,243,255:40,0 chr1 31836879 . G . PASS END=31837068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:44:0,111,1665:0,122,255:40,0 chr1 31838733 . T . PASS END=31838786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,113,1521:0,113,255:40,0 chr1 31840240 . C . PASS END=31840331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1155:0,84,255:40,0 chr1 31840332 . T . PASS END=31840332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1175:0,69,255:28,0 chr1 31840333 . C . PASS END=31840340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:29,0 chr1 31840341 . A . PASS END=31840341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 31841960 . T . PASS END=31841961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 31841962 . A . PASS END=31841963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 31841964 . A . PASS END=31841968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 31841969 . C . PASS END=31841969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 31841970 . A . PASS END=31841977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 31841978 . T . PASS END=31841978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:20,0 chr1 31841979 . C . PASS END=31841983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 31842232 . C . PASS END=31842437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,110,1451:0,110,255:40,0 chr1 31845789 . C . PASS END=31845792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr1 31845793 . T . PASS END=31845793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 31845794 . G . PASS END=31845817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1155:0,90,255:34,0 chr1 31845818 . T . PASS END=31845818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:30,0 chr1 31845819 . T . PASS END=31845833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:31,0 chr1 31845834 . T . PASS END=31845855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 31845856 . C . PASS END=31845856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 31845857 . A . PASS END=31845858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 31845859 . C . PASS END=31845859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 31845860 . A . PASS END=31845861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 31882685 . A . PASS END=31882689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1156:0,85,255:31,0 chr1 31882690 . C . PASS END=31882690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:31,0 chr1 31882691 . G . PASS END=31882693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1194:0,86,255:33,0 chr1 31882694 . A . PASS END=31882694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1119:0,69,255:30,0 chr1 31882695 . G . PASS END=31882699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 31883232 . A . PASS END=31883257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,147,255:40,0 chr1 31883258 . G . PASS END=31883282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,120,1800:0,131,255:40,0 chr1 31886113 . A . LowGQ END=31886115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:14:0,0,271:5,0,255:12,0 chr1 31886116 . G . PASS END=31886116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,421:0,11,255:12,0 chr1 31886117 . G . PASS END=31886117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr1 31886118 . G . PASS END=31886118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:16,0 chr1 31886119 . G . PASS END=31886119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:16,0 chr1 31886120 . C . LowGQ END=31886120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,493:31,0,255:15,0 chr1 31886121 . C . PASS END=31886121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 31886122 . T . LowGQ END=31886122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,565:4,0,255:17,0 chr1 31886123 . G . PASS END=31886123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 31886124 . C . PASS END=31886124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,657:0,16,255:19,0 chr1 31886125 . C . PASS END=31886125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 31886126 . T . PASS END=31886126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 31886127 . G . PASS END=31886127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,699:0,27,255:20,0 chr1 31886128 . G . PASS END=31886128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,706:0,19,255:20,0 chr1 31886129 . G . PASS END=31886129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 31886130 . A . PASS END=31886130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,806:0,28,255:22,0 chr1 31886131 . G . PASS END=31886131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 31886132 . C . PASS END=31886132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 31886133 . C . PASS END=31886133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 31886134 . T . PASS END=31886134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 31886135 . G . PASS END=31886135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:22,0 chr1 31886136 . C . PASS END=31886136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 31886137 . T . PASS END=31886137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 31886138 . C . PASS END=31886139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:23,0 chr1 31886140 . C . PASS END=31886140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 31886141 . T . PASS END=31886141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:25,0 chr1 31886142 . G . PASS END=31886142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 31886143 . C . PASS END=31886143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 31886144 . T . PASS END=31886144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:26,0 chr1 31886145 . C . PASS END=31886148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 31886149 . T . PASS END=31886149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr1 31886150 . G . PASS END=31886150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31886151 . C . PASS END=31886151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:25,0 chr1 31886861 . A . PASS END=31886870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,914:0,62,255:26,0 chr1 31886871 . A . PASS END=31886872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31886873 . G . PASS END=31886875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 31886876 . G . PASS END=31886889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 31886890 . T . PASS END=31886890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:25,0 chr1 31886891 . A . PASS END=31886892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 31886893 . C . PASS END=31886911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,945:0,65,255:26,0 chr1 31896540 . G . PASS END=31896560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,806:0,63,255:26,0 chr1 31896561 . G . PASS END=31896561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 31896562 . C . PASS END=31896562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 31896563 . C . PASS END=31896615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1221:0,86,255:34,0 chr1 31896616 . G . PASS END=31896616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:34,0 chr1 31896617 . C . PASS END=31896617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:34,0 chr1 31896618 . C . PASS END=31896618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:33,0 chr1 31896619 . T . PASS END=31896657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1243:0,102,255:35,0 chr1 31896658 . C . PASS END=31896681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,77,255:25,0 chr1 31896682 . T . PASS END=31896682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 31896683 . G . PASS END=31896688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 31896689 . T . PASS END=31896689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 31896690 . C . PASS END=31896692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 31896693 . C . PASS END=31896701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,735:0,47,255:19,0 chr1 31897530 . C . PASS END=31897530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 31897531 . T . PASS END=31897545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 31897546 . A . PASS END=31897546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 31897547 . G . PASS END=31897548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31897549 . A . PASS END=31897549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 31897550 . G . PASS END=31897571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 31897572 . C . PASS END=31897572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 31897573 . T . PASS END=31897574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31897575 . C . PASS END=31897588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 31897589 . C . PASS END=31897590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 31897591 . G . PASS END=31897591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 31897592 . T . PASS END=31897594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 31897595 . C . PASS END=31897603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31897604 . T . PASS END=31897611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 31897612 . G . PASS END=31897615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr1 31897616 . T . PASS END=31897616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr1 31897617 . G . PASS END=31897617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 31897618 . T . PASS END=31897618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:10,0 chr1 31897619 . C . PASS END=31897625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 31897626 . A . LowGQ END=31897626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:10,0 chr1 31897627 . T . PASS END=31897640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 31897641 . G . PASS END=31897641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 31897642 . C . PASS END=31897642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr1 31897643 . G . PASS END=31897711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 31897712 . C . PASS END=31897720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 31898177 . G . PASS END=31898256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,102,1474:0,102,255:40,0 chr1 31898623 . T . PASS END=31898623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 31898624 . C . PASS END=31898639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,515:0,41,255:19,0 chr1 31898640 . G . PASS END=31898642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 31898643 . G . PASS END=31898646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 31898647 . G . PASS END=31898647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 31898648 . C . PASS END=31898648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,647:0,32,255:19,0 chr1 31898649 . T . PASS END=31898650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 31898651 . C . PASS END=31898651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 31898652 . T . PASS END=31898654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 31898655 . C . PASS END=31898655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 31898656 . T . PASS END=31898666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:21,0 chr1 31898667 . A . PASS END=31898667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 31898668 . T . PASS END=31898684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr1 31898685 . A . PASS END=31898685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 31898686 . T . PASS END=31898687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 31898688 . G . PASS END=31898688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 31898689 . A . PASS END=31898691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 31898692 . T . PASS END=31898692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 31898693 . T . PASS END=31898696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 31898697 . C . PASS END=31898701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 31898702 . C . PASS END=31898706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 31898707 . A . PASS END=31898735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 31898736 . T . PASS END=31898736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 31898737 . G . PASS END=31898737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 31898738 . C . PASS END=31898748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 31898749 . C . PASS END=31898755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 31898756 . C . PASS END=31898760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31899501 . G . PASS END=31899501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 31899502 . C . PASS END=31899506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,944:0,87,255:29,0 chr1 31899507 . T . PASS END=31899507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:28,0 chr1 31899508 . C . PASS END=31899511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1072:0,90,255:30,0 chr1 31899512 . T . PASS END=31899512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 31899513 . T . PASS END=31899530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1213:0,83,255:35,0 chr1 31899531 . T . PASS END=31899531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:34,0 chr1 31899532 . G . PASS END=31899533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1318:0,92,255:36,0 chr1 31899534 . T . PASS END=31899534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:35,0 chr1 31899535 . G . PASS END=31899544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1266:0,91,255:37,0 chr1 31899545 . G . PASS END=31899545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr1 31899546 . C . PASS END=31899613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1308:0,81,255:40,0 chr1 31899614 . C . PASS END=31899614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr1 31899615 . T . PASS END=31899646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,89,255:38,0 chr1 31899647 . G . PASS END=31899649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr1 31899650 . G . PASS END=31899670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:25,0 chr1 31901825 . G . PASS END=31901827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,113,1541:0,113,255:40,0 chr1 31901828 . G . PASS END=31901902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1215:0,81,255:40,0 chr1 31901903 . T . PASS END=31901915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,894:0,64,255:26,0 chr1 31902244 . A . PASS END=31902248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 31902249 . A . PASS END=31902250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 31902251 . A . PASS END=31902254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 31902255 . A . PASS END=31902256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 31902257 . C . PASS END=31902262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 31902263 . T . PASS END=31902263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 31902264 . T . PASS END=31902267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 31902268 . C . PASS END=31902268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 31902269 . A . PASS END=31902279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 31902280 . G . PASS END=31902280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 31902281 . C . PASS END=31902284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 31902285 . G . PASS END=31902285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 31902286 . A . PASS END=31902287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 31902288 . A . PASS END=31902288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,927:0,40,255:25,0 chr1 31902289 . C . PASS END=31902291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 31902292 . T . PASS END=31902292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 31902293 . T . PASS END=31902296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 31902297 . G . PASS END=31902297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:29,0 chr1 31902298 . C . PASS END=31902328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1066:0,90,255:32,0 chr1 31902329 . G . PASS END=31902329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1147:0,44,255:30,0 chr1 31902330 . G . PASS END=31902339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr1 31902340 . G . PASS END=31902340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 31902341 . C . PASS END=31902347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 31902348 . G . PASS END=31902348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 31902349 . G . PASS END=31902351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 31902352 . T . PASS END=31902352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:26,0 chr1 31902353 . C . PASS END=31902353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 31902354 . A . PASS END=31902380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:23:0,60,848:0,61,255:24,0 chr1 31902381 . A . PASS END=31902385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 31905814 . T . PASS END=31905816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 31905817 . G . PASS END=31905818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 31905819 . G . PASS END=31905821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 31905822 . C . PASS END=31905828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 31905829 . C . PASS END=31905853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:16,0 chr1 31905854 . C . PASS END=31905854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 31905855 . A . PASS END=31905870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 31905871 . A . PASS END=31905871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr1 31905872 . C . PASS END=31905879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,681:0,41,255:19,0 chr1 31905880 . A . PASS END=31905888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 31905889 . A . PASS END=31905889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,753:0,17,255:20,3 chr1 31905890 . C . LowGQ END=31905893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:24:0,0,718:5,0,255:22,3 chr1 31905894 . A . PASS END=31905899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 31905900 . A . PASS END=31905900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 31905901 . G . PASS END=31905910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 31905911 . G . PASS END=31905912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:23,0 chr1 31905913 . C . PASS END=31905919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 31905920 . G . PASS END=31905922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 31905923 . C . PASS END=31905923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:28,0 chr1 31905924 . G . PASS END=31905935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1141:0,80,255:31,0 chr1 31905936 . A . PASS END=31905936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 31905937 . C . PASS END=31905987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1125:0,82,255:34,0 chr1 31905988 . G . PASS END=31906027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,931:0,65,255:26,0 chr1 31906028 . T . PASS END=31906030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,890:0,42,255:22,1 chr1 31906031 . A . PASS END=31906031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 31906032 . A . PASS END=31906032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:21,0 chr1 31906911 . G . PASS END=31906919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,143,255:40,0 chr1 31906920 . G . PASS END=31907046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:90:37:0,90,1350:0,111,255:40,0 chr1 32042000 . A . PASS END=32042012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 32042013 . T . PASS END=32042015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 32042016 . T . PASS END=32042023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32042024 . G . LowGQ END=32042024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 32042025 . G . PASS END=32042052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,413:0,33,255:12,0 chr1 32042053 . C . PASS END=32042054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 32042055 . C . PASS END=32042063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 32042064 . C . PASS END=32042071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 32042072 . A . PASS END=32042095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 32042096 . C . PASS END=32042096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 32042097 . C . PASS END=32042116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 32042117 . A . PASS END=32042117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 32042118 . C . PASS END=32042148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 32042149 . G . PASS END=32042190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 32042191 . C . PASS END=32042192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 32042193 . C . PASS END=32042196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 32042750 . A . PASS END=32042754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,441:0,36,255:13,0 chr1 32042755 . G . PASS END=32042760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 32042761 . T . PASS END=32042761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 32042762 . C . PASS END=32042803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 32042804 . G . PASS END=32042870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr1 32042871 . G . PASS END=32042891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr1 32042892 . G . PASS END=32042892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 32042893 . C . PASS END=32042896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32042897 . G . PASS END=32042900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 32042901 . A . PASS END=32042902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 32042903 . G . PASS END=32042908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 32042909 . T . PASS END=32042922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 32042923 . T . PASS END=32042925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 32042926 . C . PASS END=32042926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 32042927 . G . PASS END=32042931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:12,0 chr1 32042932 . C . PASS END=32042932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 32042933 . T . PASS END=32042940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:13,0 chr1 32042941 . G . PASS END=32042946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 32042947 . C . PASS END=32042947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 32042948 . C . PASS END=32042960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:16,0 chr1 32042961 . G . PASS END=32042961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 32042962 . T . PASS END=32042964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 32042965 . C . PASS END=32042965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 32042966 . T . PASS END=32042969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:16,0 chr1 32042970 . A . PASS END=32042970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 32042971 . C . PASS END=32042972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 32042973 . T . PASS END=32042973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 32042974 . C . PASS END=32042985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 32042986 . C . PASS END=32042989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 32042990 . G . PASS END=32043019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 32043020 . T . PASS END=32043020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 32043021 . T . PASS END=32043032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 32043033 . T . PASS END=32043033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 32043034 . G . PASS END=32043041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 32043042 . C . LowGQ END=32043043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:14:0,0,396:0,0,255:13,2 chr1 32043044 . T . PASS END=32043044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 32043045 . T . PASS END=32043054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32043055 . C . PASS END=32043059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 32044805 . G . PASS END=32044868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,115,1800:0,115,255:40,0 chr1 32048750 . C . PASS END=32048842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:40:0,106,1383:0,106,255:40,0 chr1 32049062 . C . PASS END=32049173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:33:0,87,1197:0,87,255:40,1 chr1 32049174 . T . PASS END=32049174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1355:0,70,255:35,0 chr1 32049175 . A . PASS END=32049176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:85:39:0,85,1380:0,85,255:37,1 chr1 32050279 . A . PASS END=32050280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 32050281 . A . PASS END=32050281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 32050282 . G . PASS END=32050295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 32050296 . G . PASS END=32050296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 32050297 . G . PASS END=32050300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 32050301 . T . PASS END=32050301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 32050302 . G . PASS END=32050303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 32050304 . T . PASS END=32050304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 32050305 . T . PASS END=32050375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1072:0,82,255:34,0 chr1 32050376 . C . PASS END=32050385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr1 32050386 . G . PASS END=32050389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 32050390 . T . PASS END=32050391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32050392 . C . PASS END=32050396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32050397 . C . PASS END=32050402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 32050487 . C . PASS END=32050491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 32050492 . G . PASS END=32050499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 32050500 . T . PASS END=32050529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 32050530 . G . PASS END=32050539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr1 32050540 . C . PASS END=32050542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 32050543 . T . PASS END=32050543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 32050544 . C . PASS END=32050546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 32050547 . C . PASS END=32050590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 32050591 . C . PASS END=32050591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 32050592 . G . PASS END=32050613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 32050614 . C . PASS END=32050627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:16,0 chr1 32050628 . G . PASS END=32050628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 32050629 . T . PASS END=32050637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:17,0 chr1 32050752 . G . PASS END=32050761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,987:0,84,255:29,0 chr1 32050762 . G . PASS END=32050765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 32050766 . A . PASS END=32050766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,872:0,37,255:23,0 chr1 32050767 . C . PASS END=32050776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 32050777 . T . PASS END=32050783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 32050784 . G . PASS END=32050795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,950:0,84,255:28,0 chr1 32050796 . A . PASS END=32050798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 32050799 . A . PASS END=32050812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 32050813 . C . PASS END=32050814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 32050815 . C . PASS END=32050851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:29:0,83,1194:0,83,255:30,0 chr1 32050852 . A . PASS END=32050852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32050853 . A . PASS END=32050855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 32050856 . G . PASS END=32050856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 32050857 . C . PASS END=32050866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 32050867 . G . PASS END=32050867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 32050868 . C . PASS END=32050872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 32050873 . T . PASS END=32050873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 32050874 . G . PASS END=32050876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32050877 . C . PASS END=32050877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr1 32050878 . C . PASS END=32050878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32050879 . A . PASS END=32050903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,922:0,62,255:26,0 chr1 32050904 . T . PASS END=32050904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 32050905 . C . PASS END=32050941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 32051041 . G . PASS END=32051041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 32051042 . A . PASS END=32051042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:36,0 chr1 32051043 . C . PASS END=32051047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1412:0,101,255:38,0 chr1 32051048 . A . PASS END=32051048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:37,0 chr1 32051049 . G . PASS END=32051057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:40:0,91,1340:0,91,255:40,0 chr1 32051058 . G . PASS END=32051058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1482:0,52,255:40,0 chr1 32051059 . G . PASS END=32051086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:42:0,90,1515:0,90,255:40,0 chr1 32051354 . C . PASS END=32051477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:33:0,90,1249:0,93,255:40,0 chr1 32052311 . A . PASS END=32052313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32052314 . G . PASS END=32052314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:20,0 chr1 32052315 . G . PASS END=32052318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 32052319 . A . PASS END=32052319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 32052320 . G . PASS END=32052333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 32052334 . A . PASS END=32052339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32052340 . G . PASS END=32052340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32052341 . G . PASS END=32052344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32052345 . C . PASS END=32052356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 32052440 . A . PASS END=32052441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:17,0 chr1 32052442 . T . LowGQ END=32052442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,587:12,0,255:16,0 chr1 32052443 . G . PASS END=32052443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 32052444 . C . PASS END=32052444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 32052445 . G . PASS END=32052460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,615:0,54,255:18,0 chr1 32052461 . C . PASS END=32052461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:14,0 chr1 32052462 . C . PASS END=32052463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:15,0 chr1 32052464 . G . PASS END=32052464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,551:0,2,255:14,0 chr1 32052465 . C . PASS END=32052466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr1 32052467 . T . PASS END=32052468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:10:19:0,10,590:0,10,255:15,0 chr1 32052469 . G . PASS END=32052471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,720:0,44,255:16,0 chr1 32052472 . C . PASS END=32052472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:15,0 chr1 32052473 . G . PASS END=32052476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 32052477 . G . PASS END=32052478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 32052479 . G . PASS END=32052479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 32052480 . G . PASS END=32052483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 32052484 . C . PASS END=32052486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,37,255:12,0 chr1 32052487 . C . PASS END=32052487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,545:0,23,255:10,1 chr1 32052488 . C . PASS END=32052490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:36:19:0,36,540:0,40,255:12,1 chr1 32052491 . A . PASS END=32052491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,588:0,22,255:12,1 chr1 32052492 . T . PASS END=32052492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:13,0 chr1 32052493 . C . PASS END=32052493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 32052494 . G . PASS END=32052494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 32052495 . T . PASS END=32052495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr1 32052496 . G . PASS END=32052497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr1 32052498 . G . PASS END=32052498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 32052499 . C . PASS END=32052501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:17,0 chr1 32052502 . C . PASS END=32052502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 32052503 . G . PASS END=32052508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,652:0,57,255:19,0 chr1 32052509 . G . PASS END=32052509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:17,0 chr1 32052510 . A . PASS END=32052546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:19,0 chr1 32052547 . C . PASS END=32052547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 32052548 . C . PASS END=32052561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 32052562 . G . PASS END=32052587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:23,0 chr1 32052588 . G . PASS END=32052588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 32052589 . G . PASS END=32052595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:23,0 chr1 32052596 . G . PASS END=32052596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 32052597 . C . PASS END=32052609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 32052610 . G . PASS END=32052623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,47,255:18,0 chr1 32084794 . A . PASS END=32084799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:19,0 chr1 32084800 . C . PASS END=32084831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,709:0,60,255:26,0 chr1 32084832 . C . PASS END=32084839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 32084840 . G . PASS END=32084840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 32084841 . C . PASS END=32084841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 32084842 . A . PASS END=32084842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 32084843 . G . PASS END=32084848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1197:0,99,255:33,0 chr1 32084849 . A . PASS END=32084849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:32,0 chr1 32084850 . G . PASS END=32084866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1371:0,95,255:37,0 chr1 32084867 . C . PASS END=32084903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1255:0,81,255:39,0 chr1 32084904 . C T, 49.97 PASS DP=37;MQ=250.00;MQRankSum=5.181;ReadPosRankSum=2.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,0:0.486,0.000:37:13,6,0:6,12,0:48:85,0,50,615,614,1229:255,0,255:20,0:4.9966e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,9,9:9,10,11,7 chr1 32084905 . G . PASS END=32084941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1305:0,92,255:38,0 chr1 32084942 . T . PASS END=32084945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:29,0 chr1 32084946 . A . PASS END=32084950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:31:0,72,1080:0,93,255:26,0 chr1 32084951 . A . PASS END=32084951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:25,0 chr1 32084952 . T . PASS END=32084954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 32084955 . G . PASS END=32084959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 32084960 . T . PASS END=32084960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 32084961 . G . PASS END=32084965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,956:0,84,255:28,0 chr1 32084966 . T . PASS END=32084987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,953:0,65,255:26,0 chr1 32084988 . G . PASS END=32084992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 32085133 . T . PASS END=32085301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1078:0,80,255:40,0 chr1 32085302 . C . PASS END=32085311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:24,0 chr1 32086444 . G . PASS END=32086466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 32086467 . G . PASS END=32086485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr1 32086486 . G . PASS END=32086506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 32086507 . A . PASS END=32086530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:17,0 chr1 32086531 . A . PASS END=32086531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:14,0 chr1 32086532 . G . PASS END=32086581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:17,0 chr1 32086582 . C . PASS END=32086582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:14,0 chr1 32086583 . T . PASS END=32086636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:17,0 chr1 32086637 . A . PASS END=32086645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 32086646 . A . PASS END=32086648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr1 32086649 . G . PASS END=32086652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 32086653 . A . PASS END=32086660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 32086661 . T . PASS END=32086661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:8,0 chr1 32086662 . C . PASS END=32086672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 32086673 . A . PASS END=32086673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 32086674 . T . PASS END=32086675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 32086676 . A . PASS END=32086687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 32087078 . A . PASS END=32087078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 32087079 . T . PASS END=32087079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 32087080 . G . PASS END=32087081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:31,0 chr1 32087082 . C . PASS END=32087082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 32087083 . C . PASS END=32087083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 32087084 . T . PASS END=32087084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr1 32087085 . C . PASS END=32087092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 32087093 . A . PASS END=32087093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:28,0 chr1 32087094 . G . PASS END=32087124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,968:0,82,255:33,0 chr1 32087125 . T . PASS END=32087125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:30,0 chr1 32087126 . A . PASS END=32087128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 32087129 . T . PASS END=32087129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:27,0 chr1 32087130 . G . PASS END=32087138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr1 32087139 . G . PASS END=32087141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 32087142 . C . PASS END=32087143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 32087144 . T . PASS END=32087144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 32087145 . C . PASS END=32087145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 32087146 . A . PASS END=32087146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 32087147 . T . PASS END=32087152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 32087153 . T . PASS END=32087154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 32087155 . G . PASS END=32087155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32087156 . C . PASS END=32087156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 32087157 . C . PASS END=32087159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32087160 . T . PASS END=32087179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:25:0,67,911:0,67,255:25,0 chr1 32087180 . T . PASS END=32087181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:21,0 chr1 32087182 . T . PASS END=32087187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 32087188 . C . PASS END=32087193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,53,255:17,0 chr1 32089124 . A . PASS END=32089136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 32089137 . C . PASS END=32089162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,553:0,45,255:17,0 chr1 32089163 . C . PASS END=32089163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 32089164 . G . PASS END=32089220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,468:0,45,255:18,0 chr1 32089221 . G . PASS END=32089221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 32089222 . G . PASS END=32089222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 32089223 . G . PASS END=32089227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 32089228 . C . PASS END=32089251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 32089252 . G . PASS END=32089253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32089254 . T . PASS END=32089318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,545:0,45,255:18,0 chr1 32089319 . C . PASS END=32089326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32089327 . C . PASS END=32089329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32089330 . C . PASS END=32089350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:12,0 chr1 32090598 . G . PASS END=32090598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32090599 . G . PASS END=32090688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:28:0,80,1111:0,80,255:37,0 chr1 32090689 . G . PASS END=32090717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 32090718 . T . PASS END=32090719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 32092391 . G . PASS END=32092406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,344:0,33,255:13,0 chr1 32092407 . G . PASS END=32092456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,592:0,48,255:19,0 chr1 32092457 . C . PASS END=32092470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 32092471 . A . PASS END=32092487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,721:0,57,255:19,0 chr1 32092488 . C . PASS END=32092524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr1 32092525 . A G, 46.31 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=3.001;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,5,0:0.333,0.000:15:5,3,0:5,2,0:45:81,0,50,179,350,528:149,0,255:9,0:4.6311e+01,1.2322e-04,5.3000e+01,1.7881e+02,3.8439e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,2,3:5,5,2,3 chr1 32092526 . T . PASS END=32092532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32092533 . A . PASS END=32092534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32092535 . T . PASS END=32092547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 32092548 . G . PASS END=32092556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32092557 . C . PASS END=32092561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 32092562 . T . PASS END=32092562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 32092563 . C . PASS END=32092566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 32092567 . A . PASS END=32092577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:12:0,21,315:0,36,255:7,0 chr1 32092578 . C . PASS END=32092581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 32096214 . T . PASS END=32096227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 32096228 . A . PASS END=32096228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,582:0,52,255:21,0 chr1 32096229 . A . PASS END=32096264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,900:0,69,255:25,0 chr1 32096265 . A G, 50.00 PASS DP=27;MQ=215.06;MQRankSum=1.012;ReadPosRankSum=1.900;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,16,0:0.593,0.000:27:6,9,0:5,7,0:48:85,0,48,544,394,937:255,0,255:9,0:5.0000e+01,7.7141e-05,5.1114e+01,4.5000e+02,4.2828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,8,8:4,7,7,9 chr1 32096266 . A . PASS END=32096273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr1 32096274 . T . PASS END=32096302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,90,255:35,0 chr1 32096303 . C . PASS END=32096443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:35:0,95,1335:0,95,255:40,0 chr1 32098037 . G . PASS END=32098233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:31:0,87,1305:0,93,255:40,0 chr1 32098234 . A . PASS END=32098234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,978:0,60,255:27,0 chr1 32098235 . C . PASS END=32098239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 32098760 . T . PASS END=32098940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:34:0,92,1332:0,92,255:40,0 chr1 32100823 . C . PASS END=32100859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:26,0 chr1 32100860 . A . PASS END=32100939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1068:0,87,255:31,0 chr1 32100940 . C . PASS END=32100951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,945:0,69,255:23,0 chr1 32100952 . G . PASS END=32100984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 32100985 . A . PASS END=32100995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 32100996 . G . PASS END=32100996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 32100997 . G . PASS END=32101002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 32101003 . G . PASS END=32101003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr1 32101004 . A . PASS END=32101006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 32101007 . C . PASS END=32101022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 32101023 . G . PASS END=32101023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 32101024 . G . PASS END=32101031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 32101032 . C . PASS END=32101033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 32101034 . A . PASS END=32101034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 32101035 . C . PASS END=32101040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 32101041 . T . PASS END=32101041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 32101042 . A . PASS END=32101053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 32101054 . T . PASS END=32101054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 32101055 . A . PASS END=32101055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 32101056 . T . PASS END=32101056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,480:0,18,255:14,0 chr1 32101057 . T . PASS END=32101057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:15,0 chr1 32101058 . G . PASS END=32101087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 32101088 . G . PASS END=32101088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 32101089 . G . PASS END=32101100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 32101101 . T . PASS END=32101101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 32101102 . G . PASS END=32101123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 32107201 . C . PASS END=32107209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,233,255:40,0 chr1 32110442 . C . PASS END=32110457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 32110458 . C . PASS END=32110461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 32110462 . C . PASS END=32110465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32118252 . T . PASS END=32118262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 32118263 . G . PASS END=32118263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,1 chr1 32118264 . C . PASS END=32118264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:43:26:0,43,934:0,43,255:25,1 chr1 32118265 . C . PASS END=32118265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:26,0 chr1 32118266 . C . PASS END=32118266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 32118267 . C . PASS END=32118268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,979:0,81,255:28,0 chr1 32118269 . T . PASS END=32118269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 32118270 . C . PASS END=32118420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1033:0,84,255:40,0 chr1 32118421 . C . PASS END=32118438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 32118439 . G . PASS END=32118441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 32118442 . G . PASS END=32118449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 32118450 . A . PASS END=32118450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:14,0 chr1 32118451 . G . PASS END=32118454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:23:0,36,540:0,69,255:12,0 chr1 32119200 . C . PASS END=32119277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:41:0,97,1651:0,97,255:40,0 chr1 32119468 . C . PASS END=32119468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 32119469 . T . PASS END=32119615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,85,255:40,0 chr1 32119616 . C . PASS END=32119618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr1 32119619 . C . PASS END=32119620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 32119621 . T . PASS END=32119626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:25,0 chr1 32119627 . T . PASS END=32119644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:17:0,45,659:0,51,255:18,0 chr1 32120393 . C . PASS END=32120459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1739:0,120,255:40,0 chr1 32120915 . C . PASS END=32120922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 32120923 . C . PASS END=32120923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 32120924 . A . PASS END=32120942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 32120943 . G . PASS END=32120943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 32120944 . G . PASS END=32120945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 32120946 . C . PASS END=32120946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 32120947 . T . PASS END=32120965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 32120966 . T . PASS END=32120966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 32120967 . C . PASS END=32120975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr1 32120976 . C . PASS END=32120976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,421:0,15,255:13,0 chr1 32120977 . C . PASS END=32121024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,629:0,40,255:19,0 chr1 32121025 . T . PASS END=32121025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:15,0 chr1 32121026 . C . PASS END=32121048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,651:0,48,255:17,0 chr1 32121049 . C . PASS END=32121049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 32121050 . G . PASS END=32121051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 32121052 . C . PASS END=32121052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr1 32121053 . T . PASS END=32121053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 32121054 . C . PASS END=32121054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:15,0 chr1 32121055 . T . PASS END=32121055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 32121056 . C . PASS END=32121056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:15,0 chr1 32121057 . C . PASS END=32121069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 32121070 . C . PASS END=32121070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 32121071 . C . PASS END=32121071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 32121072 . T . PASS END=32121072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 32121073 . G . PASS END=32121095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr1 32121096 . G . PASS END=32121103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 32122001 . C . PASS END=32122011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,798:0,53,255:19,0 chr1 32122012 . G . PASS END=32122015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32122016 . T . PASS END=32122016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32122017 . C . PASS END=32122017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32122018 . C . PASS END=32122018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:20,0 chr1 32122019 . A . PASS END=32122019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32122020 . T . PASS END=32122020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 32122021 . A . PASS END=32122035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 32122036 . C . PASS END=32122036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 32122037 . A . PASS END=32122039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32122040 . G . PASS END=32122045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 32122634 . C . PASS END=32122669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:44:0,93,1561:0,93,255:40,0 chr1 32124089 . T . PASS END=32124092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 32124093 . G . PASS END=32124101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 32124102 . T . PASS END=32124102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32124103 . G . PASS END=32124115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:13,0 chr1 32124116 . G . PASS END=32124134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,645:0,48,255:19,0 chr1 32124135 . G . PASS END=32124146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 32124147 . T . PASS END=32124178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,584:0,51,255:19,0 chr1 32124515 . C . PASS END=32124520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 32124521 . A . PASS END=32124521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:26,0 chr1 32124522 . G . PASS END=32124544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:30,0 chr1 32124545 . G . PASS END=32124565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:26,0 chr1 32126186 . A . PASS END=32126190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 32126191 . G . PASS END=32126191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 32126192 . T . PASS END=32126201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 32126202 . C . PASS END=32126202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 32126203 . C . PASS END=32126215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 32126216 . G . PASS END=32126216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 32126217 . G . PASS END=32126225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 32126226 . G . PASS END=32126238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 32126239 . C . PASS END=32126239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32126667 . C . PASS END=32126689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 32126690 . T . PASS END=32126690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 32126691 . G . PASS END=32126719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,838:0,72,255:24,0 chr1 32126720 . C . PASS END=32126720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 32127015 . C . PASS END=32127059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,120,1800:0,128,255:40,0 chr1 32127261 . C . PASS END=32127262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 32127263 . G . PASS END=32127264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:33:0,68,1082:0,68,255:31,0 chr1 32127265 . G . PASS END=32127305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1272:0,89,255:36,0 chr1 32127935 . C . PASS END=32127950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1249:0,81,255:37,0 chr1 32127951 . C . PASS END=32127951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr1 32127952 . C . PASS END=32127952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 32127953 . G A, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.026;ReadPosRankSum=0.861;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,23,0:0.622,0.000:37:13,16,0:1,7,0:46:85,0,45,821,493,1314:255,0,255:15,0:5.0000e+01,1.0924e-04,4.8196e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,15,8:5,9,14,9 chr1 32127954 . T . PASS END=32127988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1324:0,81,255:40,0 chr1 32128188 . C . PASS END=32128196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1312:0,94,255:37,0 chr1 32128197 . A . PASS END=32128197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr1 32128198 . G . PASS END=32128228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1260:0,81,255:37,0 chr1 32128229 . G . PASS END=32128229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:34,0 chr1 32128230 . G . PASS END=32128234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1321:0,83,255:35,0 chr1 32128235 . A . PASS END=32128235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:34,0 chr1 32128236 . T . PASS END=32128239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:36:0,81,1280:0,81,255:34,0 chr1 32128240 . C . PASS END=32128241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1129:0,61,255:27,0 chr1 32128242 . T . PASS END=32128242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 32128243 . C . PASS END=32128243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1119:0,72,255:27,0 chr1 32128244 . G . PASS END=32128244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,89,255:27,0 chr1 32128245 . A . PASS END=32128245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,1008:0,16,255:25,0 chr1 32128246 . A . PASS END=32128246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 32128247 . T . PASS END=32128247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1080:0,89,255:23,0 chr1 32128248 . C . PASS END=32128248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,994:0,16,255:21,0 chr1 32128249 . C . PASS END=32128250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,76,255:23,0 chr1 32128251 . T . PASS END=32128251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,942:0,37,255:22,0 chr1 32128252 . T . PASS END=32128252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:23,0 chr1 32128253 . C . PASS END=32128253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,848:0,26,255:21,0 chr1 32128254 . G . PASS END=32128254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 32128255 . C . PASS END=32128255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,861:0,37,255:16,0 chr1 32128256 . T . PASS END=32128258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,54,255:19,0 chr1 32128259 . C . LowGQ END=32128259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,818:4,0,255:15,0 chr1 32130773 . C . PASS END=32130774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 32130775 . T . PASS END=32130775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 32130776 . C . PASS END=32130779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 32130780 . G . PASS END=32130780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 32130781 . C . PASS END=32130784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 32130785 . A . PASS END=32130799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr1 32130800 . A . PASS END=32130814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr1 32130815 . G . PASS END=32130832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,712:0,44,255:19,0 chr1 32130833 . A . PASS END=32130833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 32130834 . C . PASS END=32130835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 32131184 . C . PASS END=32131200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1299:0,95,255:37,0 chr1 32131201 . C . PASS END=32131219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:36:0,98,1396:0,98,255:37,0 chr1 32131483 . C . PASS END=32131536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1197:0,88,255:36,0 chr1 32131638 . C . PASS END=32131659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr1 32131660 . A . PASS END=32131660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 32131661 . G . PASS END=32131682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 32133176 . C . PASS END=32133182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr1 32133183 . C . PASS END=32133183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 32133184 . C . PASS END=32133197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr1 32133198 . G . PASS END=32133198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 32133199 . A . PASS END=32133229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,864:0,61,255:26,0 chr1 32133766 . A . PASS END=32133766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr1 32133767 . G . PASS END=32133767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 32133768 . G A, 50.00 PASS DP=9;MQ=250.00;MQRankSum=2.219;ReadPosRankSum=0.729;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,5,0:0.556,0.000:9:1,3,0:3,2,0:48:85,0,50,179,143,322:139,0,177:6,0:5.0000e+01,6.6527e-05,5.2758e+01,1.7882e+02,1.7782e+02,3.2486e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,3,2:1,3,3,2 chr1 32133769 . C . PASS END=32133769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 32133770 . A . PASS END=32133770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 32133771 . G . PASS END=32133772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 32133773 . C . PASS END=32133776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 32133777 . G . PASS END=32133777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 32133778 . G . PASS END=32133779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 32133780 . G . PASS END=32133780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 32133781 . G . PASS END=32133784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 32133785 . G . PASS END=32133785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 32133786 . T . PASS END=32133786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 32133787 . G . PASS END=32133789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:17,0 chr1 32133790 . A . PASS END=32133790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 32133791 . C . PASS END=32133795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 32133796 . G . PASS END=32133796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 32133797 . T . PASS END=32133800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 32133801 . C . PASS END=32133801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 32133802 . T . PASS END=32133803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 32133804 . G . PASS END=32133804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 32133805 . T . PASS END=32133805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 32133806 . T . PASS END=32133806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 32133807 . G . PASS END=32133819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:15:0,34,559:0,34,255:13,0 chr1 32134403 . C . PASS END=32134409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:30,0 chr1 32134410 . C . PASS END=32134410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 32134411 . C . PASS END=32134412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32134413 . T . PASS END=32134413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:27,0 chr1 32134414 . T . PASS END=32134417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 32134418 . T . PASS END=32134418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 32134419 . C . PASS END=32134433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 32134434 . A . PASS END=32134453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:26,0 chr1 32134454 . G . PASS END=32134455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 32134456 . C . PASS END=32134456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 32136191 . C . PASS END=32136200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32136201 . A . PASS END=32136205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 32136206 . C . PASS END=32136221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:18,0 chr1 32136222 . A . PASS END=32136222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:14,0 chr1 32136223 . C . PASS END=32136235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 32136236 . A . PASS END=32136236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 32136237 . C . PASS END=32136245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 32136246 . C . PASS END=32136246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 32136247 . C . PASS END=32136247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 32137216 . G . PASS END=32137221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,792:0,30,255:23,0 chr1 32137222 . G . PASS END=32137223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 32137224 . C . PASS END=32137229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 32137230 . G . PASS END=32137230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 32137231 . A . PASS END=32137231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:22,0 chr1 32137232 . C . PASS END=32137234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 32137235 . G . PASS END=32137238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32137239 . A . PASS END=32137260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 32138017 . C . PASS END=32138018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 32138019 . C . PASS END=32138073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:25,0 chr1 32138074 . A . PASS END=32138074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 32138075 . C . PASS END=32138099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 32138100 . C . PASS END=32138100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32138101 . A . PASS END=32138101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32138102 . C . PASS END=32138103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 32138197 . C . PASS END=32138219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:17,0 chr1 32138220 . G . PASS END=32138220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 32138221 . C . PASS END=32138238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:18,0 chr1 32138325 . C . PASS END=32138336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 32138337 . G . PASS END=32138368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:23,0 chr1 32138369 . C . PASS END=32138369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 32138370 . T . PASS END=32138412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,869:0,66,255:24,0 chr1 32138413 . T . PASS END=32138422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:19,0 chr1 32138423 . C . PASS END=32138438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 32138439 . A . PASS END=32138441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 32140608 . C . PASS END=32140640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,105,1543:0,105,255:40,0 chr1 32140859 . C . PASS END=32140859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32140860 . A . PASS END=32140860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 32140861 . G . PASS END=32140870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1041:0,87,255:29,0 chr1 32140871 . G . PASS END=32140871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 32140872 . A . PASS END=32140891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1054:0,90,255:30,0 chr1 32140892 . A . PASS END=32140892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,879:0,57,255:28,0 chr1 32140893 . C . PASS END=32140901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 32140902 . C . PASS END=32140902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 32140903 . C . PASS END=32140912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 32145056 . C . PASS END=32145059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 32145060 . A . PASS END=32145060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 32145061 . G . PASS END=32145064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 32145065 . C . PASS END=32145065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 32145066 . A . PASS END=32145073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 32145074 . C . PASS END=32145074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32145075 . T . PASS END=32145075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 32145076 . C . PASS END=32145076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32145077 . C . PASS END=32145077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 32145078 . T . PASS END=32145078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32145079 . T . PASS END=32145079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 32145080 . G . PASS END=32145100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1119:0,83,255:34,0 chr1 32145101 . A . PASS END=32145101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,987:0,33,255:30,0 chr1 32145102 . C . PASS END=32145117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1153:0,88,255:35,0 chr1 32145118 . G . PASS END=32145118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1105:0,50,255:32,0 chr1 32145119 . G . PASS END=32145125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1160:0,88,255:34,0 chr1 32145126 . T . PASS END=32145126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 32145127 . G . PASS END=32145136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:32,0 chr1 32145137 . G . PASS END=32145137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr1 32145138 . G . PASS END=32145160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1154:0,83,255:33,0 chr1 32145161 . T . PASS END=32145161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:30,0 chr1 32145162 . C . PASS END=32145174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1239:0,86,255:31,0 chr1 32145175 . G . PASS END=32145175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr1 32145176 . C . PASS END=32145228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1355:0,95,255:37,0 chr1 32145229 . T . PASS END=32145229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:32,0 chr1 32145230 . T . PASS END=32145286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:34:0,92,1274:0,92,255:40,0 chr1 32145405 . C . PASS END=32145452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,118,1800:0,118,255:40,0 chr1 32145643 . C . PASS END=32145702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,105,1476:0,106,255:40,0 chr1 32146506 . C . PASS END=32146507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 32146508 . T . PASS END=32146508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 32146509 . C . PASS END=32146509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 32146510 . T . PASS END=32146510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 32146511 . C . PASS END=32146532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1166:0,86,255:36,0 chr1 32146624 . T . PASS END=32146663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,86,255:32,0 chr1 32146664 . C . PASS END=32146668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 32148535 . C . PASS END=32148543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 32148544 . A . PASS END=32148544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 32148545 . G . PASS END=32148545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 32148546 . A . PASS END=32148546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 32148547 . G . PASS END=32148555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,918:0,84,255:30,0 chr1 32148556 . C . PASS END=32148556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 32148557 . C . PASS END=32148560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 32148561 . G . PASS END=32148570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1124:0,77,255:26,0 chr1 32148571 . A G, 137.29 PASS DP=30;MQ=249.21;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,17,0:0,13,0:87:175,90,0,1163,90,1163:255,90,0:0,0:1.3729e+02,8.7292e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,14:0,0,15,15 chr1 32148572 . G . PASS END=32148583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 32148584 . C . PASS END=32148587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 32148588 . T . PASS END=32148601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,68,255:26,0 chr1 32148602 . C . PASS END=32148603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr1 32148795 . C . PASS END=32148825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,839:0,69,255:24,0 chr1 32148826 . G . PASS END=32148826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 32148827 . G . PASS END=32148837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr1 32148838 . C . PASS END=32148848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:29,0 chr1 32148935 . C . PASS END=32148941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 32148942 . C . PASS END=32148943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 32148944 . A . PASS END=32148952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1255:0,89,255:34,0 chr1 32148953 . C . PASS END=32148953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:32,0 chr1 32148954 . G . PASS END=32148970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1241:0,89,255:33,0 chr1 32149308 . C . PASS END=32149349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:38:0,82,1457:0,82,255:40,0 chr1 32149551 . C . PASS END=32149551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32149552 . T . PASS END=32149553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,850:0,64,255:26,0 chr1 32149554 . C . PASS END=32149554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 32149555 . A . PASS END=32149557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 32149558 . C . PASS END=32149604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1205:0,86,255:36,0 chr1 32149710 . G . PASS END=32149719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,759:0,47,255:19,0 chr1 32149720 . G . PASS END=32149720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32149721 . G . PASS END=32149724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,798:0,50,255:19,0 chr1 32149725 . G . PASS END=32149757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 32149758 . G . PASS END=32149779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:19,0 chr1 32149780 . G . PASS END=32149780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:15,0 chr1 32149781 . C . PASS END=32149787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 32149788 . T . PASS END=32149832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,35,255:13,0 chr1 32150124 . C . PASS END=32150128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 32150129 . C . PASS END=32150147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr1 32150148 . G . PASS END=32150160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 32150161 . G . PASS END=32150161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 32150162 . G . PASS END=32150169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 32150170 . G . PASS END=32150170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 32150171 . A . PASS END=32150198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 32150199 . C . PASS END=32150199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 32150200 . G . PASS END=32150201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 32150202 . T . PASS END=32150230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr1 32150231 . C . PASS END=32150231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32150422 . C . PASS END=32150422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:33,0 chr1 32150423 . T . PASS END=32150423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:31,0 chr1 32150424 . T . PASS END=32150426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:35,0 chr1 32150427 . G . PASS END=32150427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr1 32150428 . C . PASS END=32150431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:35,0 chr1 32150432 . T . PASS END=32150432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1225:0,61,255:33,0 chr1 32150433 . T . PASS END=32150457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1234:0,81,255:35,0 chr1 32151240 . C . PASS END=32151255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 32151256 . C . PASS END=32151260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 32151261 . G . PASS END=32151268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 32151269 . G . PASS END=32151269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 32151270 . C . PASS END=32151283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 32151284 . T . PASS END=32151284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 32151285 . C . PASS END=32151294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:17,0 chr1 32151295 . G . PASS END=32151295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 32151296 . G . PASS END=32151343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,635:0,40,255:19,0 chr1 32151344 . G . PASS END=32151356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 32151357 . C . PASS END=32151357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32151358 . T . PASS END=32151361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 32151362 . A . PASS END=32151362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr1 32151363 . G . PASS END=32151364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 32151365 . G . PASS END=32151365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:9,0 chr1 32151366 . C . PASS END=32151368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 32151369 . C . PASS END=32151371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 32151692 . C . PASS END=32151700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 32151701 . T . PASS END=32151715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 32151716 . C . PASS END=32151716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 32151717 . C . PASS END=32151736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 32151845 . T . PASS END=32151848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32151849 . C . PASS END=32151849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 32151850 . T . PASS END=32151854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr1 32151855 . G . PASS END=32151855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 32151856 . C . PASS END=32151856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:26,0 chr1 32151857 . T . PASS END=32151857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 32151858 . G . PASS END=32151858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 32151859 . G . PASS END=32151859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 32151860 . C . PASS END=32151864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 32151865 . C . PASS END=32151880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 32153638 . C . PASS END=32153645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1205:0,102,255:35,0 chr1 32153646 . T . PASS END=32153646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr1 32153647 . T . PASS END=32153701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,83,255:37,0 chr1 32153702 . A . PASS END=32153712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:27:0,60,900:0,81,255:25,0 chr1 32154068 . C . PASS END=32154103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,99,1441:0,101,255:39,0 chr1 32154462 . C . PASS END=32154480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,100,1520:0,100,255:40,1 chr1 32154481 . A . PASS END=32154481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1533:0,63,255:40,0 chr1 32154482 . A . PASS END=32154572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:38:0,87,1305:0,88,255:40,0 chr1 32154651 . C . PASS END=32154651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1172:0,71,255:31,0 chr1 32154652 . T . PASS END=32154652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 32154653 . T . PASS END=32154653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1117:0,72,255:31,0 chr1 32154654 . C . PASS END=32154686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1197:0,86,255:33,0 chr1 32155062 . A . PASS END=32155066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,933:0,62,255:26,0 chr1 32155067 . G . PASS END=32155097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1027:0,87,255:29,0 chr1 32155098 . C . PASS END=32155098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 32155099 . A . PASS END=32155122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:31,0 chr1 32155123 . T . PASS END=32155123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 32155124 . G . PASS END=32155135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 32155136 . T . PASS END=32155136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:26,0 chr1 32155342 . C . PASS END=32155344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 32155345 . G . PASS END=32155384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,61,255:26,0 chr1 32155385 . T . PASS END=32155395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 32155396 . T . PASS END=32155396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 32155397 . C . PASS END=32155404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:30,0 chr1 32155405 . G . PASS END=32155405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 32155406 . T . PASS END=32155420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1099:0,80,255:32,0 chr1 32155421 . G . PASS END=32155421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr1 32155422 . G . PASS END=32155434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1094:0,80,255:30,0 chr1 32155435 . C . PASS END=32155435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 32155436 . A . PASS END=32155440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 32155441 . A . PASS END=32155452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,74,255:26,0 chr1 32155968 . C . PASS END=32155968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 32155969 . T . PASS END=32155969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 32155970 . T . PASS END=32155970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 32155971 . C . PASS END=32155973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 32155974 . T . PASS END=32155994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,692:0,57,255:19,0 chr1 32156130 . A . PASS END=32156132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 32156133 . T . PASS END=32156133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 32156134 . T . PASS END=32156174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 32156789 . C . PASS END=32156800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:32:0,88,1152:0,88,255:33,0 chr1 32156801 . G . PASS END=32156801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 32156802 . G . PASS END=32156827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:34,0 chr1 32157018 . C . PASS END=32157021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,311:0,27,255:9,0 chr1 32157022 . G . PASS END=32157029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 32157030 . C . PASS END=32157030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 32157031 . A . PASS END=32157042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr1 32157043 . G . PASS END=32157076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:19,0 chr1 32157077 . C . PASS END=32157085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 32157086 . C . PASS END=32157086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 32157087 . C . PASS END=32157098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:22,0 chr1 32157099 . A . PASS END=32157099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 32157100 . A . PASS END=32157100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 32157101 . A . PASS END=32157102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 32157103 . C . PASS END=32157103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 32157104 . C . PASS END=32157108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,829:0,66,255:22,0 chr1 32157109 . T . PASS END=32157113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32157199 . C . PASS END=32157206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 32157207 . C . PASS END=32157208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 32157209 . T . PASS END=32157215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,764:0,66,255:22,0 chr1 32157216 . C . PASS END=32157227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,751:0,49,255:19,0 chr1 32157228 . T . PASS END=32157228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,540:0,21,255:16,0 chr1 32157229 . C . PASS END=32157233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 32157234 . C . PASS END=32157239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 32157240 . G . PASS END=32157240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 32157241 . G . PASS END=32157243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 32157606 . G . PASS END=32157668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,120,1800:0,123,255:40,0 chr1 32158075 . C . PASS END=32158076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 32158077 . T . PASS END=32158077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr1 32158078 . C . PASS END=32158078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 32158079 . T . PASS END=32158079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 32158080 . C . PASS END=32158110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1091:0,80,255:34,0 chr1 32158199 . C . PASS END=32158220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,997:0,87,255:31,0 chr1 32158221 . T . PASS END=32158221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 32158222 . C . PASS END=32158222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 32158223 . T . PASS END=32158224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:28,0 chr1 32158225 . C . PASS END=32158227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:28,0 chr1 32158228 . T . PASS END=32158228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 32158229 . C . PASS END=32158237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:51:30:0,51,1017:0,51,255:28,0 chr1 32158238 . T . PASS END=32158238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:20:30:0,20,949:0,20,255:26,0 chr1 32158239 . G . PASS END=32158241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 32158242 . C . PASS END=32158242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:27,0 chr1 32158243 . A . PASS END=32158243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 32158368 . C . PASS END=32158368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 32158369 . T . PASS END=32158370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32158371 . A . PASS END=32158371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32158372 . A . PASS END=32158372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,682:0,24,255:19,0 chr1 32158373 . G . PASS END=32158373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32158374 . T C, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=1.701;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:7,3,0:3,7,0:48:85,0,50,358,329,687:255,0,255:10,0:5.0000e+01,6.5233e-05,5.3000e+01,3.5766e+02,3.6374e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,3,7:5,5,4,6 chr1 32158375 . G . PASS END=32158378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32158379 . C . PASS END=32158379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 32158380 . A . PASS END=32158386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 32158387 . G . PASS END=32158409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 32158693 . C . PASS END=32158701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32158702 . C . PASS END=32158707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,732:0,66,255:22,0 chr1 32158708 . T . PASS END=32158708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32158709 . C . PASS END=32158732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 32158733 . A . PASS END=32158733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 32158734 . G . PASS END=32158755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 32159745 . C . PASS END=32159771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:38:0,96,1297:0,97,255:39,0 chr1 32160704 . C . PASS END=32160778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,104,1496:0,104,255:40,0 chr1 32160787 . A . PASS END=32160822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,124,255:40,0 chr1 32161362 . C . PASS END=32161368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32161369 . G . PASS END=32161369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 32161370 . C . PASS END=32161372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32161373 . C . PASS END=32161375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 32161376 . T . PASS END=32161376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:24,0 chr1 32161377 . C . PASS END=32161388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:25,0 chr1 32161689 . C . PASS END=32161689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 32161690 . T . LowGQ END=32161690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,325:54,0,255:14,0 chr1 32161691 . T . PASS END=32161692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,599:0,40,255:19,0 chr1 32161693 . G . PASS END=32161693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,504:0,7,255:16,0 chr1 32161694 . C . PASS END=32161694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,584:0,40,255:18,0 chr1 32161695 . T . PASS END=32161695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,515:0,24,255:17,0 chr1 32161696 . C . PASS END=32161697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,570:0,40,255:19,0 chr1 32161698 . C . PASS END=32161699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 32161700 . T . LowGQ END=32161700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,602:0,0,255:18,0 chr1 32161701 . T . PASS END=32161701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 32161702 . T . PASS END=32161702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr1 32161703 . C . PASS END=32161703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 32161704 . T . PASS END=32161704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 32161705 . G . LowGQ END=32161705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,624:0,0,255:18,0 chr1 32161706 . C . PASS END=32161706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 32161707 . C . PASS END=32161707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 32161708 . T . PASS END=32161708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:22,0 chr1 32161709 . T . PASS END=32161709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:24,0 chr1 32161710 . C . PASS END=32161710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,696:0,22,255:21,0 chr1 32161711 . T . PASS END=32161711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,723:0,39,255:22,0 chr1 32161712 . G . PASS END=32161712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:23,0 chr1 32161713 . G . PASS END=32161713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 32161714 . C . PASS END=32161715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr1 32161716 . G . PASS END=32161717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 32161718 . T . PASS END=32161718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 32161719 . T . PASS END=32161719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32161720 . C . PASS END=32161721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:21,0 chr1 32161722 . T . PASS END=32161722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32161723 . C . PASS END=32161723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 32161724 . C . PASS END=32161724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,798:0,28,255:22,0 chr1 32161725 . C . PASS END=32161725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32161726 . G . PASS END=32161726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:22,0 chr1 32161727 . T . PASS END=32161727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32161728 . C . PASS END=32161728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 32161729 . A . PASS END=32161729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,814:0,28,255:21,0 chr1 32161730 . G . PASS END=32161730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:6:24:0,6,709:0,6,255:20,0 chr1 32161731 . C . PASS END=32161731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 32161732 . T . PASS END=32161732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,764:0,33,255:22,0 chr1 32161733 . G . PASS END=32161735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32161736 . C . PASS END=32161737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 32161738 . T . PASS END=32161738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32161739 . C . PASS END=32161739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:20,0 chr1 32161740 . C . PASS END=32161740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 32161741 . A . PASS END=32161741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 32161742 . C . PASS END=32161742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:19,0 chr1 32162564 . C . PASS END=32162580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:18,0 chr1 32162581 . C . PASS END=32162586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 32162587 . G . PASS END=32162587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 32162588 . G . PASS END=32162588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 32162589 . C . PASS END=32162599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 32162600 . G . PASS END=32162600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 32162601 . G . PASS END=32162601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 32162602 . T . PASS END=32162657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,770:0,62,255:25,0 chr1 32162658 . T . PASS END=32162658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:20,0 chr1 32162659 . C . PASS END=32162673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 32162674 . A . PASS END=32162689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:20:0,45,675:0,49,255:19,0 chr1 32162821 . C . PASS END=32162901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1343:0,81,255:40,0 chr1 32163507 . C . PASS END=32163537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:17,0 chr1 32163538 . C . PASS END=32163538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 32163539 . C . PASS END=32163553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,631:0,51,255:19,0 chr1 32163554 . C . PASS END=32163556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 32163557 . C . PASS END=32163558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32163559 . G . PASS END=32163559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32163560 . G . PASS END=32163560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 32163561 . C . PASS END=32163561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32163562 . C . PASS END=32163567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 32163568 . G . PASS END=32163583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 32163584 . G . PASS END=32163585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,768:0,42,255:23,0 chr1 32163586 . G . PASS END=32163589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr1 32163590 . G . PASS END=32163590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:23,0 chr1 32163591 . G . PASS END=32163608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 32163609 . G . PASS END=32163609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32163610 . T . PASS END=32163613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32163614 . C . PASS END=32163620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32163621 . A . PASS END=32163630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 32163631 . C . PASS END=32163631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32163632 . G . PASS END=32163655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1008:0,68,255:26,0 chr1 32163656 . T . PASS END=32163661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 32163662 . A . PASS END=32163662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 32163663 . A . PASS END=32163672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 32163673 . A . PASS END=32163690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,850:0,64,255:26,0 chr1 32163691 . A . PASS END=32163693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32163694 . A . PASS END=32163694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 32163695 . T . PASS END=32163698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 32163699 . G . PASS END=32163709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 32163710 . C . PASS END=32163716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr1 32163717 . C . PASS END=32163717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 32163718 . T . PASS END=32163718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:18,0 chr1 32163719 . G . PASS END=32163719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 32163720 . G . PASS END=32163731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 32163732 . G . PASS END=32163754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 32163755 . T . PASS END=32163755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 32163756 . G . PASS END=32163764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 32163765 . C . PASS END=32163773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 32164084 . C . PASS END=32164168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,165,255:40,0 chr1 32164169 . A . PASS END=32164205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,142,255:40,0 chr1 32164206 . T G, 194.48 PASS DP=49;MQ=249.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,29,0:0,20,0:144:232,147,0,1900,147,1900:255,157,0:0,0:1.9448e+02,1.4448e+02,0.0000e+00,4.5000e+02,1.7925e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,35:0,0,20,29 chr1 32164207 . T . PASS END=32164207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 32165414 . C . PASS END=32165420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,764:0,63,255:24,0 chr1 32165421 . G . PASS END=32165421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 32165422 . C . PASS END=32165424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr1 32165425 . G . PASS END=32165428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:29,0 chr1 32165429 . A . PASS END=32165429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 32165430 . C . PASS END=32165443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1116:0,87,255:30,0 chr1 32165444 . A . PASS END=32165444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 32165445 . G . PASS END=32165457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:35,0 chr1 32165458 . A . PASS END=32165494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1133:0,82,255:34,0 chr1 32165495 . G T, 146.32 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,16,0:0,17,0:96:184,99,0,1280,99,1280:255,99,0:0,0:1.4632e+02,9.6321e+01,0.0000e+00,4.5000e+02,1.3109e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,13:0,0,17,16 chr1 32165496 . T . PASS END=32165521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:33,0 chr1 32165522 . A . PASS END=32165530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,90,255:26,0 chr1 32165531 . C . PASS END=32165531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 32165642 . C . PASS END=32165716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:42:0,92,1407:0,92,255:40,0 chr1 32167722 . C . PASS END=32167791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,111,1665:0,117,255:40,0 chr1 32167792 . C . PASS END=32167792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:36,0 chr1 32167793 . A . PASS END=32167794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 32193021 . T . PASS END=32193030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 32193031 . G . PASS END=32193054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 32193055 . T . PASS END=32193055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 32193056 . C . PASS END=32193088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 32193089 . T . PASS END=32193089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 32193090 . C . PASS END=32193094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,325:0,27,255:9,0 chr1 32193095 . G . PASS END=32193099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 32193100 . C . PASS END=32193105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32193106 . T . PASS END=32193141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr1 32193142 . G . PASS END=32193142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 32193143 . T . PASS END=32193153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 32193154 . T . PASS END=32193154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 32193155 . G . PASS END=32193155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 32193156 . A . PASS END=32193156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 32193157 . T . PASS END=32193157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 32193158 . G . PASS END=32193176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 32193177 . G . PASS END=32193181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 32193182 . G . PASS END=32193183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 32193184 . C . PASS END=32193188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 32193189 . C . PASS END=32193196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 32193197 . T . PASS END=32193198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32193199 . G . PASS END=32193201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 32193202 . T . PASS END=32193205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 32193206 . C . PASS END=32193206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:6,0 chr1 32193626 . G . PASS END=32193627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,939:0,68,255:27,0 chr1 32193628 . T . PASS END=32193646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1041:0,84,255:28,0 chr1 32193647 . T C, 134.28 PASS DP=30;MQ=250.00;FractionInformativeReads=0.967 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,19,0:0,10,0:84:172,87,0,1124,87,1124:255,87,0:0,0:1.3428e+02,8.4282e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,12:0,0,15,14 chr1 32193648 . G . PASS END=32193650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32193651 . C . PASS END=32193651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 32193652 . C . PASS END=32193655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 32193656 . C . PASS END=32193656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32193657 . G . PASS END=32193666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 32193667 . T . PASS END=32193667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 32193668 . C . PASS END=32193682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 32193783 . C . PASS END=32193881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1354:0,101,255:40,0 chr1 32194199 . C . PASS END=32194234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,103,1390:0,103,255:40,0 chr1 32196401 . C . PASS END=32196440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,488:0,42,255:18,0 chr1 32196441 . C . PASS END=32196441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 32196442 . G . PASS END=32196449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 32196450 . G . PASS END=32196474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:23,0 chr1 32196475 . G . PASS END=32196475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 32196476 . C . PASS END=32196503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 32196504 . G . PASS END=32196522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,629:0,51,255:17,0 chr1 32196523 . C . PASS END=32196523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 32196524 . A . PASS END=32196552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,507:0,45,255:17,0 chr1 32196553 . G . PASS END=32196553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 32196554 . G . PASS END=32196578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,47,255:17,0 chr1 32196579 . A . PASS END=32196579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 32196580 . C . PASS END=32196587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,592:0,51,255:17,0 chr1 32196588 . A . PASS END=32196588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr1 32196589 . A . PASS END=32196602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:18,0 chr1 32196603 . T . PASS END=32196603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 32196604 . C . PASS END=32196609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr1 32196610 . G . PASS END=32196646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 32196647 . C G, 36.31 PASS DP=19;MQ=250.00;MQRankSum=3.194;ReadPosRankSum=1.991;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,5,0:0.263,0.000:19:6,3,0:8,2,0:36:71,0,50,113,501,614:84,0,255:13,0:3.6311e+01,1.0374e-03,5.3001e+01,1.1322e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,3,2:7,7,1,4 chr1 32196648 . G . PASS END=32196652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 32196653 . G . PASS END=32196668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,825:0,63,255:24,0 chr1 32196669 . T . PASS END=32196669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 32196670 . C . PASS END=32196684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,856:0,72,255:24,0 chr1 32196685 . C . PASS END=32196693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 32196694 . G . PASS END=32196694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 32196695 . C . PASS END=32196698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32196699 . A . PASS END=32196701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,814:0,53,255:20,0 chr1 32196702 . C . PASS END=32196715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:25,0 chr1 32196716 . G . PASS END=32196717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32196718 . G . PASS END=32196720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 32196721 . G . PASS END=32196722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32196723 . A . PASS END=32196725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,994:0,70,255:26,0 chr1 32196726 . A . PASS END=32196737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32196738 . T . PASS END=32196738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 32196739 . C . PASS END=32196746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 32196747 . G . PASS END=32196747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 32196748 . G . PASS END=32196749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32196750 . T . PASS END=32196755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 32196756 . G . PASS END=32196761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 32196762 . A . PASS END=32196762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 32196763 . G . PASS END=32196776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 32196777 . A . PASS END=32196788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 32196789 . C . PASS END=32196887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1041:0,80,255:33,0 chr1 32196888 . A . PASS END=32196888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:31,0 chr1 32196889 . G . PASS END=32197020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:36:0,81,1215:0,81,255:40,0 chr1 32197716 . C . PASS END=32197722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 32197723 . A . PASS END=32197723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 32197724 . C . PASS END=32197732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 32197733 . T . PASS END=32197733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 32197734 . C . PASS END=32197747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,740:0,66,255:23,0 chr1 32197748 . A . PASS END=32197748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 32197749 . A . PASS END=32197751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr1 32197752 . C . PASS END=32197753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 32197754 . G . PASS END=32197755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 32198118 . C . PASS END=32198130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1141:0,93,255:37,0 chr1 32198131 . T . PASS END=32198131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:35,0 chr1 32198132 . G . PASS END=32198202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:36:0,80,1215:0,80,255:40,0 chr1 32198203 . A . PASS END=32198207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,92,255:25,0 chr1 32198208 . C . PASS END=32198208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 32198209 . T . PASS END=32198213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 32198573 . C . PASS END=32198590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,321:0,33,255:13,0 chr1 32198591 . G . PASS END=32198597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 32198598 . G . PASS END=32198598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 32198599 . C . PASS END=32198601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 32198602 . T . PASS END=32198602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr1 32198603 . G . PASS END=32198616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,653:0,51,255:19,0 chr1 32198617 . G . PASS END=32198619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 32198620 . C . PASS END=32198621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32198622 . G . PASS END=32198736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,750:0,62,255:26,0 chr1 32198737 . G . PASS END=32198741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 32198742 . G . PASS END=32198744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32200784 . A . PASS END=32200799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,682:0,44,255:19,0 chr1 32200800 . A . PASS END=32200800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 32200801 . G . PASS END=32200801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 32200802 . G . PASS END=32200802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 32200803 . C . PASS END=32200803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr1 32200804 . T . PASS END=32200805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 32200806 . A . PASS END=32200806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 32200807 . G . PASS END=32200807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 32200808 . C . PASS END=32200808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 32200809 . T . PASS END=32200813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 32200814 . A . PASS END=32200819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 32200820 . C . PASS END=32200824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 32200825 . G . PASS END=32200835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,50,255:19,0 chr1 32200836 . A . PASS END=32200836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:15,0 chr1 32200837 . C . PASS END=32200844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,47,255:16,0 chr1 32200845 . A . PASS END=32200845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:12,0 chr1 32200846 . G . PASS END=32200852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 32200853 . A . PASS END=32200853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 32200854 . G . PASS END=32200854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32200855 . C . PASS END=32200855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr1 32200856 . A . PASS END=32200857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32200858 . G . PASS END=32200858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32200859 . C . PASS END=32200859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 32200860 . T . PASS END=32200862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32200863 . C . PASS END=32200870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32200871 . C . PASS END=32200873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32200874 . C . PASS END=32200874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 32200875 . G . PASS END=32200882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 32201181 . C . PASS END=32201266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,111,1413:0,114,255:40,0 chr1 32201428 . C . PASS END=32201494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:36:0,94,1252:0,94,255:40,0 chr1 32201922 . T . PASS END=32201925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 32201926 . T . PASS END=32201926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 32201927 . G . PASS END=32201933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:26,0 chr1 32201934 . C . PASS END=32201951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr1 32201952 . G . PASS END=32201952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 32201953 . T . PASS END=32201959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 32201960 . A . PASS END=32201991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,67,255:26,0 chr1 32202174 . C . PASS END=32202280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:25,0 chr1 32202281 . A . PASS END=32202281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 32202282 . G . PASS END=32202282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr1 32202283 . A . PASS END=32202283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr1 32202284 . A . PASS END=32202290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,931:0,75,255:25,0 chr1 32202291 . A . PASS END=32202291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:20,0 chr1 32202292 . G . PASS END=32202303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 32202304 . A . PASS END=32202320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 32202321 . C . PASS END=32202324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:17:0,39,585:0,41,255:13,0 chr1 32203030 . C . PASS END=32203123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:36:0,82,1310:0,82,255:40,0 chr1 32203124 . T . PASS END=32203124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1415:0,71,255:38,0 chr1 32203125 . T . PASS END=32203125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 32203126 . T . PASS END=32203132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 32203253 . C . PASS END=32203280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,894:0,62,255:26,0 chr1 32203281 . G . PASS END=32203282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1007:0,81,255:27,0 chr1 32203283 . G . PASS END=32203284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32203285 . G . PASS END=32203285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32203286 . A . PASS END=32203287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:51:28:0,51,951:0,51,255:27,0 chr1 32203288 . C . PASS END=32203291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32203292 . G . PASS END=32203305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:27:0,60,900:0,74,255:23,0 chr1 32203306 . T . PASS END=32203306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 32203307 . G . PASS END=32203310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32203311 . A . PASS END=32203311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 32203312 . G . PASS END=32203320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 32203321 . C . PASS END=32203327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 32203328 . A . PASS END=32203328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr1 32203329 . C . PASS END=32203347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 32203348 . C . PASS END=32203352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32203353 . G . PASS END=32203356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 32203801 . C . PASS END=32203818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,876:0,72,255:26,0 chr1 32203819 . G . PASS END=32203927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:35:0,87,1085:0,87,255:40,0 chr1 32204188 . G . PASS END=32204231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:34:0,102,1278:0,102,255:40,0 chr1 32204433 . A . PASS END=32204434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,430:0,42,255:14,0 chr1 32204435 . T . PASS END=32204435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 32204436 . G . PASS END=32204463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 32204464 . A . PASS END=32204464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 32204465 . G . PASS END=32204485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 32204486 . T . PASS END=32204486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 32204487 . A . PASS END=32204490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 32204491 . G . PASS END=32204491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 32204492 . G . PASS END=32204499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:15,0 chr1 32204500 . G . PASS END=32204500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 32204501 . T . PASS END=32204507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 32204508 . C . PASS END=32204513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 32204514 . C . PASS END=32204516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 32204517 . G . PASS END=32204523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,31,255:11,0 chr1 32204524 . A . PASS END=32204527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:11:0,21,315:0,33,255:9,0 chr1 32204528 . C . PASS END=32204528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 32204529 . C . PASS END=32204538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:7,0 chr1 32204909 . C . PASS END=32204922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 32204923 . G . PASS END=32204945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:18,0 chr1 32204946 . G . PASS END=32204963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 32204964 . A . PASS END=32204964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 32204965 . G . PASS END=32204984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,764:0,63,255:22,0 chr1 32204985 . C . PASS END=32205009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 32205010 . G . PASS END=32205015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 32205016 . T . PASS END=32205016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,550:0,12,255:12,0 chr1 32205017 . G . PASS END=32205017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:12,0 chr1 32205018 . G . PASS END=32205019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 32205020 . C . PASS END=32205020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:13,0 chr1 32205021 . C . PASS END=32205022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr1 32205023 . G . PASS END=32205024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32205025 . A . PASS END=32205025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr1 32205026 . G . PASS END=32205026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32205027 . G . PASS END=32205027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 32205028 . C . PASS END=32205028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32205029 . A . PASS END=32205029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 32205030 . C . PASS END=32205050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 32205051 . T . PASS END=32205077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr1 32205078 . T . PASS END=32205078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 32205079 . G . PASS END=32205095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 32205096 . A . PASS END=32205102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 32205103 . G . PASS END=32205154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr1 32205155 . T . PASS END=32205201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr1 32205202 . C . PASS END=32205224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 32205225 . G . PASS END=32205236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,255:5,0 chr1 32205527 . C . PASS END=32205535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,613:0,48,255:17,0 chr1 32205536 . C . PASS END=32205536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 32205537 . T . PASS END=32205551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,613:0,43,255:19,0 chr1 32205552 . G . PASS END=32205555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,800:0,63,255:22,0 chr1 32205556 . T . PASS END=32205556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 32205557 . G . PASS END=32205576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 32205577 . C . PASS END=32205581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 32205582 . C . PASS END=32205582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 32205583 . A . PASS END=32205592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 32205593 . A . PASS END=32205593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 32205594 . G . PASS END=32205594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32205595 . T . PASS END=32205595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 32205596 . C . PASS END=32205623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1086:0,87,255:32,0 chr1 32205624 . G . PASS END=32205624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 32205625 . C . PASS END=32205635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1156:0,83,255:32,0 chr1 32205711 . C . PASS END=32205779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:45:0,83,1584:0,83,255:40,0 chr1 32205948 . C . PASS END=32205957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,529:0,45,255:15,0 chr1 32205958 . T . PASS END=32205958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 32205959 . C . PASS END=32205972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:19,0 chr1 32205973 . T . PASS END=32205988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:21,0 chr1 32205989 . A . PASS END=32205989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 32205990 . G . PASS END=32206012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:25,0 chr1 32206013 . T . PASS END=32206013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr1 32206014 . G . PASS END=32206017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 32206018 . A . PASS END=32206018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 32206019 . C . PASS END=32206025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 32206026 . G . PASS END=32206033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 32206034 . C . PASS END=32206057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,878:0,72,255:26,0 chr1 32206058 . C . PASS END=32206058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 32206059 . C . PASS END=32206059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 32206060 . A . PASS END=32206067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:30:23:0,30,762:0,30,255:23,0 chr1 32206068 . C . PASS END=32206068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32206069 . T . PASS END=32206069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:21,0 chr1 32206070 . G . PASS END=32206080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 32206081 . A . PASS END=32206081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 32206082 . C . PASS END=32206083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 32206084 . A . PASS END=32206084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 32206085 . C . PASS END=32206092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 32206093 . A . PASS END=32206093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 32206094 . T . PASS END=32206103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 32206104 . T . PASS END=32206104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 32206105 . G . PASS END=32206107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32206108 . A . PASS END=32206139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 32206140 . A . PASS END=32206142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 32206974 . T . PASS END=32206983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,870:0,72,255:25,0 chr1 32206984 . A . PASS END=32207019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1042:0,84,255:30,0 chr1 32207020 . C . PASS END=32207020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 32207021 . T . PASS END=32207029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1078:0,90,255:30,0 chr1 32207030 . C . PASS END=32207030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 32207031 . C . PASS END=32207054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1103:0,90,255:31,0 chr1 32207055 . G . PASS END=32207063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 32207064 . G . PASS END=32207064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:22,0 chr1 32207065 . C . PASS END=32207072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 32207073 . G . PASS END=32207074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 32207075 . C . PASS END=32207075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 32207076 . A . PASS END=32207076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 32207077 . G . PASS END=32207080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 32207225 . C . PASS END=32207225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32207226 . T . PASS END=32207226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:26,0 chr1 32207227 . G . PASS END=32207228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32207229 . G . PASS END=32207229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:27,0 chr1 32207230 . G . PASS END=32207230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32207231 . C . PASS END=32207231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 32207232 . A . PASS END=32207232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 32207233 . T . PASS END=32207233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,987:0,63,255:28,0 chr1 32207234 . T . PASS END=32207290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1046:0,82,255:34,0 chr1 32207291 . G . PASS END=32207291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 32207292 . C . PASS END=32207292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 32207293 . A . PASS END=32207326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,71,255:26,0 chr1 32207401 . C . PASS END=32207406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 32207407 . A . PASS END=32207407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr1 32207408 . C . PASS END=32207473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,825:0,66,255:26,0 chr1 32207474 . G . PASS END=32207504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:29,0 chr1 32207505 . C . PASS END=32207507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32207508 . G . PASS END=32207514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32207515 . A . PASS END=32207543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 32207544 . C . PASS END=32207544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32207545 . A . PASS END=32207568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:22,0 chr1 32207654 . C . PASS END=32207660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,560:0,45,255:16,0 chr1 32207661 . C . PASS END=32207661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 32207662 . T . PASS END=32207664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,525:0,51,255:17,0 chr1 32207665 . A . PASS END=32207666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr1 32207667 . G . PASS END=32207668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 32207669 . T . PASS END=32207669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 32207670 . G . PASS END=32207682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,631:0,54,255:19,0 chr1 32207683 . G . PASS END=32207685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 32207686 . T . PASS END=32207711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,662:0,46,255:19,0 chr1 32207712 . C . PASS END=32207712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32207713 . C . PASS END=32207714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:19,0 chr1 32207715 . G . PASS END=32207715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32207716 . G . PASS END=32207730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:20:0,46,668:0,46,255:19,0 chr1 32207731 . C . PASS END=32207737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 32207738 . T . PASS END=32207761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,548:0,41,255:19,0 chr1 32207762 . T . PASS END=32207762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 32207763 . G . PASS END=32207768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr1 32207769 . G . PASS END=32207778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 32207779 . C . PASS END=32207779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32207780 . A . PASS END=32207780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 32207781 . T . PASS END=32207793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 32207794 . C . PASS END=32207808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:8:0,21,315:0,24,255:8,0 chr1 32207809 . T . PASS END=32207818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 32208439 . C . PASS END=32208446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 32208447 . G . PASS END=32208447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 32208448 . C . PASS END=32208453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 32208454 . T . PASS END=32208474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,482:0,42,255:18,0 chr1 32208475 . G . PASS END=32208494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 32208495 . T . PASS END=32208495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 32208496 . T . PASS END=32208519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr1 32208520 . A . PASS END=32208520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 32208521 . G . PASS END=32208527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 32208528 . A . PASS END=32208528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 32208529 . T . PASS END=32208550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 32208551 . G . PASS END=32208551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 32208552 . C . PASS END=32208555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32208556 . T . PASS END=32208557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32208558 . C . PASS END=32208559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32208560 . G . PASS END=32208560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:19,0 chr1 32208561 . G . PASS END=32208562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32208563 . G . PASS END=32208563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 32208564 . C . PASS END=32208564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32208565 . A . PASS END=32208584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,631:0,43,255:19,0 chr1 32208585 . T . PASS END=32208585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,598:0,27,255:16,0 chr1 32208586 . C . PASS END=32208591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:16,0 chr1 32208592 . A . PASS END=32208597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:27:18:0,27,405:0,40,255:9,0 chr1 32208598 . C . PASS END=32208603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:11,0 chr1 32209794 . C . PASS END=32209815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 32209816 . G . PASS END=32209826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr1 32209827 . T . PASS END=32209827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,634:0,35,255:21,0 chr1 32209828 . C . PASS END=32209852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,792:0,62,255:26,0 chr1 32209853 . G . PASS END=32209879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:28,0 chr1 32209880 . C . PASS END=32209910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 32209911 . T . PASS END=32209911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 32209912 . C . PASS END=32209918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 32209919 . C . PASS END=32209919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 32209920 . A . PASS END=32209928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32209929 . A . PASS END=32209958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr1 32210249 . C . PASS END=32210259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 32210260 . A . PASS END=32210332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1215:0,84,255:39,0 chr1 32221600 . C . PASS END=32221624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr1 32221625 . A . PASS END=32221626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 32221627 . C . PASS END=32221627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 32221628 . A . PASS END=32221633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 32221634 . G . PASS END=32221635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32221636 . T . PASS END=32221637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 32221638 . C . PASS END=32221641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32221642 . A . PASS END=32221642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:9,0 chr1 32221643 . G . PASS END=32221646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,443:0,33,255:12,0 chr1 32221647 . A . PASS END=32221647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 32221648 . A . PASS END=32221665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:12,0 chr1 32221666 . G . PASS END=32221667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 32221668 . G . PASS END=32221668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr1 32221669 . C . PASS END=32221680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 32221681 . G . PASS END=32221681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 32221682 . C . PASS END=32221684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 32221685 . C . PASS END=32221685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 32221686 . A . PASS END=32221702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr1 32221703 . G . PASS END=32221749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,553:0,48,255:17,0 chr1 32221750 . C . PASS END=32221750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 32221751 . C . PASS END=32221765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 32221766 . G . PASS END=32221766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 32221767 . C . PASS END=32221800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 32221801 . C . PASS END=32221805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 32221806 . G . PASS END=32221816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 32221817 . C . PASS END=32221828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 32221829 . G . PASS END=32221829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr1 32221830 . C . PASS END=32221831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32221832 . G . PASS END=32221832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 32221833 . C . PASS END=32221837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 32221838 . C . PASS END=32221848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,1 chr1 32221849 . T . PASS END=32221849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:19,0 chr1 32221850 . G . PASS END=32221851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 32221852 . A . PASS END=32221898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,592:0,51,255:19,0 chr1 32221899 . A . PASS END=32221908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 32221909 . C . PASS END=32221912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 32221913 . G . PASS END=32221917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32221918 . C . PASS END=32221918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 32221919 . C . PASS END=32221928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 32221929 . G . PASS END=32221946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 32221947 . G . PASS END=32221992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 32221993 . T . PASS END=32221996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 32221997 . G . PASS END=32222055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 32222056 . G . PASS END=32222056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 32222057 . C . PASS END=32222064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,398:0,36,255:13,0 chr1 32222065 . C . PASS END=32222077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 32222078 . C . PASS END=32222080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 32222081 . G . PASS END=32222087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 32222088 . G . PASS END=32222088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 32222089 . C . PASS END=32222121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,537:0,42,255:17,0 chr1 32222122 . T . PASS END=32222122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 32222123 . G . PASS END=32222150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 32222151 . C . PASS END=32222151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 32222152 . G . PASS END=32222172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 32222173 . C . PASS END=32222173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 32222174 . C . PASS END=32222194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 32222195 . C . PASS END=32222204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 32222205 . G . PASS END=32222217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 32222218 . G . PASS END=32222262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 32222263 . G . PASS END=32222370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:17,0 chr1 32222371 . C . PASS END=32222373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 32222374 . A . PASS END=32222374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 32222375 . C . PASS END=32222399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:11,0 chr1 32222400 . A . PASS END=32222411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 32222412 . T . PASS END=32222416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 32222802 . C . PASS END=32222822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,205,255:40,0 chr1 32224922 . A . PASS END=32224951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,131,255:40,0 chr1 32230281 . C . PASS END=32230283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32230284 . C . PASS END=32230290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr1 32230291 . G . PASS END=32230291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 32230292 . C . PASS END=32230295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 32230296 . G . PASS END=32230377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1008:0,81,255:36,0 chr1 32230378 . C . PASS END=32230387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 32230388 . G . PASS END=32230388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 32230389 . C . PASS END=32230403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:26,0 chr1 32256204 . T . PASS END=32256213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:24,0 chr1 32256214 . C . PASS END=32256214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 32256215 . T . PASS END=32256257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr1 32256258 . A . PASS END=32256294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1008:0,81,255:32,0 chr1 32256295 . G . PASS END=32256295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:29,0 chr1 32256296 . C . PASS END=32256303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:30,0 chr1 32256304 . C . PASS END=32256304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:27,0 chr1 32256305 . T . PASS END=32256309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 32256310 . A . PASS END=32256318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,87,255:25,0 chr1 32256319 . A . PASS END=32256370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,623:0,43,255:19,0 chr1 32256371 . G . PASS END=32256379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32256380 . T . PASS END=32256398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 32256399 . G . PASS END=32256399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 32256400 . T . PASS END=32256417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:16,0 chr1 32256418 . T . PASS END=32256477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,389:0,36,255:13,0 chr1 32256478 . A . PASS END=32256488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:23:10:0,23,405:0,23,255:9,0 chr1 32256489 . A . PASS END=32256489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 32256490 . T . PASS END=32256496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 32256497 . A . PASS END=32256501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr1 32256502 . C . PASS END=32256508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 32256509 . C . PASS END=32256509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 32256510 . T . PASS END=32256510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 32256511 . G . PASS END=32256515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 32256516 . T . PASS END=32256516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,284:0,5,255:11,0 chr1 32256517 . G . PASS END=32256520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 32256521 . G . PASS END=32256521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:12,0 chr1 32256522 . C . PASS END=32256526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 32256527 . G . LowGQ END=32256527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,341:8,0,255:11,0 chr1 32256528 . C . PASS END=32256531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr1 32256532 . C . PASS END=32256532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 32256533 . G . PASS END=32256533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 32256534 . C . PASS END=32256534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 32256535 . C . PASS END=32256535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 32256536 . C . PASS END=32256536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:10,0 chr1 32256537 . A . LowGQ END=32256537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,283:27,0,255:7,0 chr1 32256538 . G . PASS END=32256538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32256539 . G . PASS END=32256539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr1 32256540 . A . PASS END=32256540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:11,0 chr1 32256541 . T . PASS END=32256541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 32256542 . G . PASS END=32256543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,349:0,9,255:11,0 chr1 32256544 . T . PASS END=32256545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr1 32256546 . C . PASS END=32256546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32256547 . C . LowGQ END=32256547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,194:28,0,221:9,0 chr1 32256548 . A T, 0.09 DRAGENSnpHardQUAL DP=12;MQ=250.00;MQRankSum=2.262;ReadPosRankSum=2.262;FractionInformativeReads=0.917;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,3,0:0.273,0.000:11:5,0,0:3,3,0:17:18,0,49,45,260,338:80,0,249:8,0:9.3955e-02,1.6696e+01,6.8509e+01,6.1489e+01,3.1176e+02,3.5755e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,1,0,3:6,2,3,0 chr1 32256549 . G . LowGQ END=32256549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,251:22,0,255:11,0 chr1 32256550 . T . PASS END=32256552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 32256553 . T . PASS END=32256556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,401:0,42,255:14,0 chr1 32256557 . G . PASS END=32256558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:14,0 chr1 32256559 . T . LowGQ END=32256559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,382:10,0,255:13,0 chr1 32256560 . C . PASS END=32256560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,462:0,45,255:15,0 chr1 32256561 . T . PASS END=32256561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:14,0 chr1 32256562 . G . PASS END=32256562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 32256563 . G . PASS END=32256563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 32256564 . C . PASS END=32256565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,532:0,51,255:17,0 chr1 32256566 . A . LowGQ END=32256566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,474:4,0,255:15,0 chr1 32256567 . G . PASS END=32256567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,492:0,20,255:15,0 chr1 32256568 . A . PASS END=32256569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,440:0,34,255:15,0 chr1 32256570 . C . PASS END=32256577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 32256578 . T . PASS END=32256578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr1 32256579 . G . PASS END=32256581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 32256582 . T . PASS END=32256582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 32256583 . C . PASS END=32256585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 32256586 . G . PASS END=32256586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 32256587 . G . PASS END=32256599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 32256600 . A . PASS END=32256600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:14,0 chr1 32256601 . G . PASS END=32256634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,44,255:19,0 chr1 32256635 . C . PASS END=32256639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 32256640 . C . PASS END=32256695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,637:0,51,255:19,0 chr1 32256696 . C . PASS END=32256698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 32256699 . G . PASS END=32256714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 32256715 . T . PASS END=32256715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 32256716 . A . PASS END=32256717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 32256718 . C . PASS END=32256739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 32256740 . A . PASS END=32256740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 32256741 . G . PASS END=32256751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 32256752 . T . PASS END=32256752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 32256753 . T . PASS END=32256753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 32256754 . T . PASS END=32256754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 32256755 . G . PASS END=32256758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 32256759 . C . PASS END=32256759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 32256760 . T . PASS END=32256760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 32256761 . T . PASS END=32256761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,835:0,42,255:21,0 chr1 32256762 . C . PASS END=32256765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32256766 . A . PASS END=32256766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 32256767 . A . PASS END=32256774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:24,0 chr1 32256775 . C . PASS END=32256775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:23,0 chr1 32256776 . T . PASS END=32256783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:24,0 chr1 32256784 . G . PASS END=32256786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 32256787 . G . PASS END=32256787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 32256788 . T . PASS END=32256788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:22,0 chr1 32256789 . G . PASS END=32256803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,925:0,64,255:26,0 chr1 32256804 . C . PASS END=32256804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 32256805 . T . PASS END=32256805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,901:0,78,255:26,0 chr1 32256806 . T . PASS END=32256807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 32256808 . G . PASS END=32256833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 32256834 . T . PASS END=32256834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,979:0,59,255:25,0 chr1 32256835 . G . PASS END=32256879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,739:0,62,255:24,0 chr1 32256880 . A . PASS END=32256885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32256886 . C . PASS END=32256890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32256891 . G . PASS END=32256892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 32257816 . C . PASS END=32257822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr1 32257823 . C . PASS END=32257834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr1 32257835 . C . PASS END=32257835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 32257836 . A . PASS END=32257838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 32257839 . C . PASS END=32257855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr1 32257856 . G . PASS END=32257856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 32257857 . A . PASS END=32257858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32257859 . G . PASS END=32257859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 32257860 . G . PASS END=32257869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:30,0 chr1 32257870 . G . PASS END=32257870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 32257871 . C . PASS END=32257876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 32257877 . G . PASS END=32257877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 32257878 . A . PASS END=32257880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 32257881 . A . PASS END=32257882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 32257883 . C . PASS END=32257910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1133:0,87,255:30,0 chr1 32257911 . T . PASS END=32257911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 32257912 . G . PASS END=32257920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 32257921 . T . PASS END=32257922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 32257923 . T . PASS END=32257928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 32257929 . A . PASS END=32257929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 32257930 . G . PASS END=32257935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 32257936 . A . PASS END=32257936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 32257937 . G . PASS END=32257941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:86:29:0,86,916:0,86,255:29,0 chr1 32257942 . G . PASS END=32257942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 32257943 . C . PASS END=32257949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 32257950 . C . PASS END=32257965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:25,0 chr1 32257966 . G . PASS END=32257978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:19,0 chr1 32257979 . G . PASS END=32257981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 32257982 . C . PASS END=32257990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 32257991 . C . PASS END=32258001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 32258002 . C . PASS END=32258002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32258279 . C . PASS END=32258281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,947:0,67,255:26,0 chr1 32258282 . G . PASS END=32258287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 32258288 . G . PASS END=32258288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 32258289 . G . PASS END=32258312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,997:0,87,255:30,0 chr1 32258313 . T . PASS END=32258313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 32258314 . C . PASS END=32258324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,960:0,87,255:31,0 chr1 32258325 . T . PASS END=32258325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,922:0,76,255:30,0 chr1 32258326 . T . PASS END=32258342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1135:0,80,255:32,0 chr1 32258343 . G . PASS END=32258343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 32258344 . C . PASS END=32258355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 32258356 . C . PASS END=32258356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 32258357 . G . PASS END=32258357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32258358 . G . PASS END=32258368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,64,255:25,0 chr1 32258879 . C . PASS END=32258897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,637:0,41,255:17,0 chr1 32258898 . T . PASS END=32258898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:16,0 chr1 32258899 . G . PASS END=32258911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,737:0,54,255:19,0 chr1 32258912 . C . PASS END=32258935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:25,0 chr1 32258936 . G . PASS END=32258936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 32258937 . A . PASS END=32258942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 32258943 . A . PASS END=32258943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:23,0 chr1 32258944 . A . PASS END=32258978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,909:0,62,255:25,0 chr1 32258979 . G . PASS END=32258979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 32258980 . G . PASS END=32258980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 32258981 . C . PASS END=32258982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 32258983 . G . PASS END=32258983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 32258984 . G . PASS END=32258991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 32258992 . T . PASS END=32258992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:23,0 chr1 32258993 . G . PASS END=32258997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 32258998 . C . PASS END=32258998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 32258999 . A . PASS END=32259023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 32259024 . G . PASS END=32259028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,775:0,50,255:19,0 chr1 32259029 . C . PASS END=32259029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 32259348 . C . PASS END=32259348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 32259349 . T . PASS END=32259349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 32259350 . G . PASS END=32259371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:25,0 chr1 32259372 . A . PASS END=32259372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 32259373 . A . PASS END=32259386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:26,0 chr1 32259387 . G . PASS END=32259390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 32259391 . T . PASS END=32259391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:27,0 chr1 32259392 . C . PASS END=32259478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1177:0,80,255:39,0 chr1 32259479 . C . PASS END=32259481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 32259482 . A . PASS END=32259482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:24,0 chr1 32259483 . T . PASS END=32259498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr1 32259725 . C . PASS END=32259753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1258:0,92,255:37,0 chr1 32259754 . A . PASS END=32259790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:37:0,82,1296:0,82,255:40,0 chr1 32259791 . C T, 49.21 PASS DP=43;MQ=249.18;MQRankSum=4.928;ReadPosRankSum=2.628;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:13,6,0:10,13,0:48:84,0,50,678,823,1501:255,0,255:21,0:4.9214e+01,7.3776e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,6,13:9,14,11,8 chr1 32259792 . G . PASS END=32259823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1260:0,105,255:40,0 chr1 32259824 . A . PASS END=32259828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 32259829 . T . PASS END=32259836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr1 32262191 . C . PASS END=32262195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32262196 . G . PASS END=32262196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 32262197 . A . PASS END=32262205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,807:0,66,255:26,0 chr1 32262206 . G . PASS END=32262208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 32262209 . C . PASS END=32262209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 32262210 . A . PASS END=32262210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 32262211 . G . PASS END=32262257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1049:0,83,255:34,0 chr1 32262258 . A . PASS END=32262258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:30,0 chr1 32262259 . T . PASS END=32262273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1180:0,83,255:31,0 chr1 32262274 . G . PASS END=32262289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,945:0,62,255:25,0 chr1 32262290 . C . PASS END=32262290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 32262291 . T . PASS END=32262298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 32262299 . C . PASS END=32262300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 32262301 . C . PASS END=32262304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32262305 . G . PASS END=32262310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:22:0,52,693:0,52,255:19,0 chr1 32262311 . C . PASS END=32262316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 32263808 . C . PASS END=32263844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr1 32263845 . T . PASS END=32263845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 32263846 . G . PASS END=32263857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,684:0,54,255:19,0 chr1 32263858 . G . PASS END=32263860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 32263861 . T . PASS END=32263867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 32263868 . C . PASS END=32263890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 32263891 . T . PASS END=32263914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:16:0,42,630:0,47,255:19,0 chr1 32263915 . G . PASS END=32263915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr1 32263916 . A . PASS END=32263924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 32264043 . C . PASS END=32264047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 32264048 . T . PASS END=32264048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 32264049 . C . PASS END=32264062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 32264063 . G . PASS END=32264064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 32264065 . T . PASS END=32264065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 32264066 . T . PASS END=32264073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 32264074 . A . PASS END=32264074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 32264075 . G . PASS END=32264083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 32264084 . A . PASS END=32264084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 32264085 . C . PASS END=32264086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32264087 . T . PASS END=32264088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 32264089 . G . PASS END=32264101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 32264102 . C . PASS END=32264102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:22,0 chr1 32264103 . A . PASS END=32264132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,853:0,69,255:23,0 chr1 32264133 . T . PASS END=32264133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 32264134 . G . PASS END=32264134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32264135 . C . PASS END=32264135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,677:0,35,255:19,0 chr1 32264136 . C . PASS END=32264140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32264141 . T . PASS END=32264141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 32264142 . G . PASS END=32264180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,764:0,63,255:23,0 chr1 32264181 . T . PASS END=32264181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:18,0 chr1 32264182 . G . PASS END=32264206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,823:0,66,255:26,0 chr1 32264207 . G . PASS END=32264207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr1 32264208 . G . PASS END=32264213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:23,0 chr1 32264214 . A . PASS END=32264214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 32264215 . G . PASS END=32264218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 32264219 . A . PASS END=32264219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 32264220 . G . PASS END=32264220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 32264221 . G . PASS END=32264225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 32264226 . G . PASS END=32264233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 32264234 . A . PASS END=32264234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1015:0,49,255:23,0 chr1 32264235 . G . PASS END=32264235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:23,0 chr1 32264236 . C . PASS END=32264236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:23,0 chr1 32264237 . C . PASS END=32264262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,817:0,61,255:26,0 chr1 32264263 . C . PASS END=32264264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32264265 . A . PASS END=32264265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 32264266 . G . PASS END=32264266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 32264267 . A . PASS END=32264267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 32264268 . G . PASS END=32264268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 32264269 . G . PASS END=32264269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 32264270 . G . PASS END=32264273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 32264274 . C . PASS END=32264275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 32264276 . G . PASS END=32264276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32264277 . C . PASS END=32264278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 32264279 . G . PASS END=32264279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr1 32264280 . G . PASS END=32264285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 32264286 . C . PASS END=32264292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:29,0 chr1 32264293 . G . PASS END=32264293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 32264294 . T . PASS END=32264294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,928:0,51,255:28,0 chr1 32264295 . C . PASS END=32264295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32264296 . T . PASS END=32264296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 32264297 . G . PASS END=32264301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32264302 . A . PASS END=32264302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 32264303 . A . PASS END=32264303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:28,0 chr1 32264304 . C . PASS END=32264305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32264306 . T . PASS END=32264306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,917:0,32,255:27,0 chr1 32264307 . G . PASS END=32264308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr1 32264309 . T . PASS END=32264309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:28,0 chr1 32264310 . C . PASS END=32264313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:28,0 chr1 32264314 . T . PASS END=32264314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 32264315 . C . PASS END=32264320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1008:0,71,255:26,0 chr1 32264321 . T . PASS END=32264321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:23,0 chr1 32264322 . G . PASS END=32264326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:22,0 chr1 32264327 . C . PASS END=32264327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr1 32264328 . C . PASS END=32264334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,900:0,61,255:23,0 chr1 32264335 . A . PASS END=32264353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:19,0 chr1 32264354 . C . PASS END=32264357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 32264358 . T . PASS END=32264358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 32264359 . C . PASS END=32264369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,495:0,32,255:13,0 chr1 32264370 . A . LowGQ END=32264370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,349:8,0,255:9,0 chr1 32264371 . A . PASS END=32264381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 32265002 . C . PASS END=32265045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1158:0,87,255:36,0 chr1 32265046 . C . PASS END=32265046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr1 32265047 . A . PASS END=32265055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:32,0 chr1 32265056 . T . PASS END=32265056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:25,0 chr1 32265057 . A . PASS END=32265058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,88,255:27,0 chr1 32265059 . A . PASS END=32265059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:26,0 chr1 32265060 . G . PASS END=32265061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 32265062 . G . PASS END=32265068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,77,255:26,0 chr1 32265069 . T . PASS END=32265069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:23,0 chr1 32265070 . C . PASS END=32265086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,825:0,72,255:24,0 chr1 32265410 . C . PASS END=32265431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1102:0,87,255:29,0 chr1 32265432 . A . PASS END=32265432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 32265433 . A . PASS END=32265433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:28,0 chr1 32265434 . G . PASS END=32265448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1005:0,87,255:29,0 chr1 32265449 . C . PASS END=32265464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 32265617 . C . PASS END=32265631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:25,0 chr1 32265632 . G . PASS END=32265636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32265637 . A . PASS END=32265637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 32265638 . G . PASS END=32265644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1057:0,84,255:29,0 chr1 32265645 . T . PASS END=32265645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 32265646 . C . PASS END=32265667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:31,0 chr1 32265668 . T . PASS END=32265668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:28,0 chr1 32265669 . C . PASS END=32265672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 32265673 . G . PASS END=32265675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 32265676 . G . PASS END=32265677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 32265678 . T . PASS END=32265706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 32265707 . C . PASS END=32265742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 32266042 . C . PASS END=32266056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,653:0,54,255:18,0 chr1 32266057 . G . PASS END=32266062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:23,0 chr1 32266063 . C . PASS END=32266063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 32266064 . A . PASS END=32266074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 32266075 . T . PASS END=32266075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 32266076 . T . PASS END=32266079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:24,0 chr1 32266080 . T . PASS END=32266080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 32266081 . C . PASS END=32266106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,856:0,65,255:24,0 chr1 32266107 . G . PASS END=32266109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 32266110 . A . PASS END=32266111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 32266112 . C . PASS END=32266113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:50:22:0,50,782:0,50,255:19,0 chr1 32266114 . G . PASS END=32266126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 32266127 . T . PASS END=32266129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32266130 . T . PASS END=32266130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:18,0 chr1 32266131 . C . PASS END=32266176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,662:0,46,255:19,0 chr1 32266177 . G . PASS END=32266177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr1 32266178 . C . PASS END=32266178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 32266179 . T . PASS END=32266179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 32266180 . G . PASS END=32266190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 32266191 . G . PASS END=32266191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 32266192 . G . PASS END=32266192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 32266193 . A . PASS END=32266193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 32266194 . G . PASS END=32266209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,34,255:13,0 chr1 32266210 . G . PASS END=32266210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr1 32266211 . G . PASS END=32266218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,343:0,30,255:10,0 chr1 32267265 . G . PASS END=32267306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,140,255:40,0 chr1 32279552 . C . PASS END=32279553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 32279554 . G . PASS END=32279565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 32279566 . C . PASS END=32279580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 32279581 . C . PASS END=32279581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 32279582 . C . PASS END=32279618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:19,0 chr1 32279619 . T . PASS END=32279621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 32279622 . G . PASS END=32279654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,545:0,48,255:18,0 chr1 32279655 . T . PASS END=32279655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 32279656 . T . PASS END=32279667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 32279668 . T . PASS END=32279668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 32279669 . A . PASS END=32279670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 32279671 . T . PASS END=32279671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 32279672 . G . PASS END=32279683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 32279684 . T . PASS END=32279684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 32279685 . C . PASS END=32279690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 32279691 . T . PASS END=32279691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 32279692 . C . PASS END=32279696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 32279697 . A . PASS END=32279698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 32279699 . T . PASS END=32279699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr1 32279700 . G . PASS END=32279716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:9:0,24,360:0,27,255:9,0 chr1 32279717 . G . PASS END=32279717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 32279718 . C . PASS END=32279719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 32279720 . G . PASS END=32279730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:8:0,11,270:0,11,255:6,0 chr1 32279731 . C . PASS END=32279756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 32279757 . G . PASS END=32279797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,194:6,0 chr1 32279798 . T . PASS END=32279823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 32279824 . C . PASS END=32279874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 32279875 . C . PASS END=32279885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 32279886 . C . PASS END=32279886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 32279887 . C . LowGQ END=32279887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 32279888 . A . PASS END=32279916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 32279917 . G . PASS END=32279918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 32279919 . T . PASS END=32279929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 32279930 . C . PASS END=32279930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32279931 . T . PASS END=32279931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32279932 . G . PASS END=32279937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32279938 . A . PASS END=32279938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 32279939 . C . PASS END=32279949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 32279950 . A . PASS END=32279950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:13,0 chr1 32279951 . C . PASS END=32279951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32279952 . A . PASS END=32279952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32279953 . G . PASS END=32279962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 32279963 . C . PASS END=32280027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr1 32280028 . G . PASS END=32280055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 32280056 . A . PASS END=32280084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:12,0 chr1 32280085 . T . PASS END=32280085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 32280086 . C . PASS END=32280095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:12,0 chr1 32280096 . G . PASS END=32280096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 32280097 . A . PASS END=32280123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr1 32280124 . G . LowGQ END=32280124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 32280125 . C . PASS END=32280130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 32280131 . A . PASS END=32280131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 32280132 . G . PASS END=32280143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 32280144 . G . PASS END=32280144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 32280145 . T . PASS END=32280145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 32280146 . G . PASS END=32280146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 32280147 . T . PASS END=32280147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 32280148 . C . PASS END=32280209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,566:0,48,255:17,0 chr1 32280210 . T . PASS END=32280210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:15,0 chr1 32280211 . C . PASS END=32280234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,651:0,48,255:19,0 chr1 32280235 . C . PASS END=32280239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32280240 . G . PASS END=32280253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 32280254 . C . PASS END=32280257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32280258 . A . PASS END=32280259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32280260 . G . PASS END=32280262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32280263 . G . PASS END=32280271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 32280272 . C . PASS END=32280272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32280273 . C . PASS END=32280275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 32280276 . T . PASS END=32280284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 32280285 . T . PASS END=32280285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 32280286 . C . PASS END=32280286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 32280287 . T . PASS END=32280287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 32280288 . G . PASS END=32280316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,723:0,63,255:22,0 chr1 32280317 . T . PASS END=32280317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr1 32280318 . C . PASS END=32280322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 32280323 . C . PASS END=32280325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32280326 . C . PASS END=32280328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32280329 . A . PASS END=32280330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32280331 . G . PASS END=32280335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 32280336 . G . PASS END=32280346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,714:0,46,255:19,0 chr1 32280347 . G . PASS END=32280363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 32280364 . C . PASS END=32280364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 32280365 . A . PASS END=32280374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 32280375 . T . PASS END=32280375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 32280376 . C . PASS END=32280414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,898:0,72,255:26,0 chr1 32280415 . A . PASS END=32280415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,868:0,26,255:22,0 chr1 32280416 . A . PASS END=32280417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 32280418 . T . PASS END=32280418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:22,0 chr1 32280419 . C . PASS END=32280424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,969:0,65,255:23,0 chr1 32280425 . A . PASS END=32280425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,810:0,59,255:17,0 chr1 32280426 . C . PASS END=32280432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 32280433 . T . PASS END=32280438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:50:22:0,50,790:0,50,255:19,0 chr1 32280439 . C . PASS END=32280442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32280443 . G . PASS END=32280463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,631:0,43,255:19,0 chr1 32280464 . C . PASS END=32280467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 32280468 . A . PASS END=32280493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,613:0,40,255:19,0 chr1 32280494 . C . PASS END=32280496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 32280497 . A . PASS END=32280498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr1 32280499 . C . PASS END=32280499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 32280500 . T . PASS END=32280515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:16,0 chr1 32280516 . G . PASS END=32280516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 32280517 . C . PASS END=32280589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr1 32280590 . G . PASS END=32280594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 32280595 . G . PASS END=32280596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 32280597 . G . PASS END=32280598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32280599 . T . PASS END=32280600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 32280601 . T . PASS END=32280617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 32280618 . G . PASS END=32280632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr1 32280633 . T . PASS END=32280657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,1030:0,68,255:26,0 chr1 32280658 . C . PASS END=32280658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32280659 . C . PASS END=32280662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 32280663 . C . PASS END=32280663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32280664 . T . PASS END=32280668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 32280669 . A . PASS END=32280673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:29,0 chr1 32280674 . A . PASS END=32280674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1047:0,38,255:27,0 chr1 32280675 . G . PASS END=32280675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 32280676 . C . PASS END=32280676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:30,0 chr1 32280677 . T . PASS END=32280681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1127:0,93,255:31,0 chr1 32280682 . G . PASS END=32280682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 32280683 . C . PASS END=32280740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1202:0,83,255:37,0 chr1 32280741 . A . PASS END=32280741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:29,0 chr1 32280742 . G . PASS END=32280752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1373:0,98,255:37,0 chr1 32280753 . C . PASS END=32280753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1410:0,73,255:35,0 chr1 32280754 . T . PASS END=32280851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1141:0,82,255:38,0 chr1 32280852 . T . PASS END=32280882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,908:0,61,255:26,0 chr1 32280883 . T . PASS END=32280883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 32280884 . G . PASS END=32280887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 32280888 . A . PASS END=32280905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:17:0,44,675:0,44,255:19,0 chr1 32280906 . G . PASS END=32280906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 32280907 . G . PASS END=32280920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 32280921 . C . PASS END=32280925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32280926 . C . PASS END=32280929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32280930 . G . PASS END=32280934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 32374453 . C . PASS END=32374484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:40:0,87,1398:0,87,255:40,0 chr1 32374485 . T . PASS END=32374485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,7:54:24:54:0,24,1543:0,24,255:40,0 chr1 32374486 . G . PASS END=32374561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:36:0,90,1283:0,90,255:40,0 chr1 32375639 . T . PASS END=32375667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,141,255:40,0 chr1 32375668 . C . PASS END=32375713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,136,255:40,0 chr1 32377297 . C . PASS END=32377298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:25,0 chr1 32377299 . T . PASS END=32377301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 32377302 . C . PASS END=32377302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 32377303 . A . PASS END=32377309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1125:0,87,255:31,0 chr1 32377310 . C . PASS END=32377310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 32377311 . A . PASS END=32377427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:32:0,90,1208:0,96,255:40,0 chr1 32378604 . C . PASS END=32378624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:115:0,120,1800:0,255,255:40,0 chr1 32379433 . T . PASS END=32379444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,197,255:40,0 chr1 32381496 . T . PASS END=32381547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:40:0,90,1385:0,90,255:40,0 chr1 32381548 . C . PASS END=32381582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:89:42:0,89,1440:0,89,255:38,0 chr1 32381583 . A . PASS END=32381583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1465:0,79,255:31,0 chr1 32381584 . A . PASS END=32381584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1388:0,54,255:31,0 chr1 32381585 . G . PASS END=32381585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:96:42:0,96,1440:0,109,255:31,0 chr1 32381586 . T . PASS END=32381586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:29,0 chr1 32381587 . T . PASS END=32381588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:90:42:0,90,1350:0,93,255:30,0 chr1 32384571 . C . PASS END=32384666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:88:40:0,88,1427:0,88,255:40,1 chr1 32479597 . A . PASS END=32479607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr1 32479608 . G . PASS END=32479653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 32479654 . T . PASS END=32479664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 32479665 . C . PASS END=32479665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 32479666 . T . PASS END=32479695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 32479696 . C . PASS END=32479705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 32479706 . A . PASS END=32479758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 32479759 . G . PASS END=32479781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr1 32479782 . G . PASS END=32479787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32479788 . A . PASS END=32479788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32479789 . C . PASS END=32479790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 32479791 . G . PASS END=32479794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 32479795 . C . PASS END=32479808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 32479809 . C . PASS END=32479809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 32479810 . A . PASS END=32479810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,560:0,23,255:15,0 chr1 32479811 . C . PASS END=32479811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 32479812 . G . PASS END=32479826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 32479827 . A . PASS END=32479827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 32479828 . G . PASS END=32479828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 32479829 . T . PASS END=32479829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:14,0 chr1 32479830 . G . PASS END=32479832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 32479833 . C . PASS END=32479833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 32479834 . G . PASS END=32479856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr1 32479857 . G . PASS END=32479857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 32479858 . C . PASS END=32479881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 32479882 . A . PASS END=32479882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 32479883 . A . PASS END=32479890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr1 32479891 . C . PASS END=32479891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 32479892 . C . PASS END=32479893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32479894 . G . PASS END=32479915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 32479916 . T . PASS END=32479916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 32479917 . C . PASS END=32479928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 32479929 . G . PASS END=32479930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 32479931 . A . PASS END=32479937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 32479938 . C . PASS END=32479939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,535:0,31,255:14,0 chr1 32479940 . A . PASS END=32479940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 32479941 . C . PASS END=32479956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:11:0,33,396:0,33,255:11,0 chr1 32479957 . G . PASS END=32479957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 32479958 . C . PASS END=32479972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 32479973 . C . PASS END=32479978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 32495899 . A . PASS END=32496023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:52:0,105,1575:0,140,255:40,0 chr1 32497125 . T . PASS END=32497241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,106,1723:0,106,255:40,0 chr1 32498789 . G . PASS END=32498920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:33:0,91,1080:0,91,255:40,0 chr1 32498921 . A . PASS END=32498921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1075:0,74,255:33,0 chr1 32498922 . A . PASS END=32498935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1249:0,89,255:35,0 chr1 32502511 . G . PASS END=32502644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:33:0,86,1202:0,86,255:40,0 chr1 32503436 . G . PASS END=32503443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 32503444 . G . PASS END=32503469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:26,0 chr1 32503470 . G . PASS END=32503524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1125:0,83,255:33,0 chr1 32503525 . G . PASS END=32503529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 32503530 . C . PASS END=32503530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 32503531 . C . PASS END=32503533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 32503534 . C . PASS END=32503582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:33,0 chr1 32503583 . C . PASS END=32503592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:25,0 chr1 32503593 . A . PASS END=32503593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:22,0 chr1 32503594 . T . PASS END=32503622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 32503623 . A . PASS END=32503624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,829:0,41,255:19,0 chr1 32503625 . A . PASS END=32503630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 32503631 . A . PASS END=32503631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 32503632 . G . PASS END=32503634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32503635 . T . PASS END=32503635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 32503636 . A . PASS END=32503637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32504153 . G . PASS END=32504220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,149,255:40,0 chr1 32505116 . G . PASS END=32505174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,134,255:40,0 chr1 32508128 . G . PASS END=32508131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 32508132 . G . PASS END=32508132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:22,0 chr1 32508133 . G . PASS END=32508146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 32508147 . G . PASS END=32508166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 32508167 . C . PASS END=32508168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 32508169 . C . PASS END=32508169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32508170 . C . PASS END=32508198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 32508199 . A . PASS END=32508199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:20,0 chr1 32508200 . G . PASS END=32508211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr1 32508212 . A . PASS END=32508225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:38:13:0,38,466:0,38,255:13,0 chr1 32538649 . A . PASS END=32538652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:31,0 chr1 32540552 . G . PASS END=32540557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 32540558 . G . PASS END=32540561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 32540562 . A . PASS END=32540562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,951:0,65,255:26,0 chr1 32540563 . G . PASS END=32540567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 32540568 . C . PASS END=32540568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 32540569 . A . PASS END=32540678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1086:0,87,255:40,0 chr1 32541204 . G . PASS END=32541208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32541209 . G . PASS END=32541397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1141:0,93,255:40,0 chr1 32541398 . C . PASS END=32541398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,980:0,46,255:26,0 chr1 32541399 . C . PASS END=32541404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:29:0,72,1080:0,76,255:26,0 chr1 32541405 . A . PASS END=32541405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:24,0 chr1 32541406 . C . PASS END=32541408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 32541409 . T . LowGQ END=32541409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,5:28:0:28:0,0,645:13,0,255:21,0 chr1 32541410 . C . PASS END=32541412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32541413 . A . PASS END=32541413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,844:0,45,255:26,0 chr1 32541414 . C . PASS END=32541414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 32541415 . A . PASS END=32541415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,745:0,45,255:25,0 chr1 32541416 . C . PASS END=32541423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,834:0,64,255:25,0 chr1 32542242 . A . PASS END=32542247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:32,0 chr1 32542364 . A . PASS END=32542372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1252:0,80,255:36,0 chr1 32542373 . C . PASS END=32542373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:35,0 chr1 32542374 . T . PASS END=32542447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:29:0,82,1149:0,82,255:39,0 chr1 32542765 . G . PASS END=32542765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 32542766 . C . PASS END=32542771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32542772 . A . PASS END=32542772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 32542773 . G . PASS END=32542783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:31,0 chr1 32542784 . T . PASS END=32542784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:30,0 chr1 32542785 . C . PASS END=32542919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1305:0,84,255:40,0 chr1 32557276 . G . PASS END=32557284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,637:0,43,255:19,0 chr1 32557285 . G . PASS END=32557324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr1 32557325 . A . PASS END=32557325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr1 32557326 . C . PASS END=32557331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 32557332 . T . PASS END=32557332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:21,0 chr1 32557333 . C . PASS END=32557333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32557334 . T . PASS END=32557334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 32557335 . T . PASS END=32557337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 32557338 . A . PASS END=32557338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:20,0 chr1 32557339 . C . PASS END=32557377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,861:0,69,255:25,0 chr1 32557378 . C . PASS END=32557378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 32557379 . C . PASS END=32557420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,840:0,61,255:26,0 chr1 32557421 . T . PASS END=32557423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32557424 . A . PASS END=32557425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 32557426 . G . PASS END=32557429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32557430 . C . PASS END=32557430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 32557431 . A . PASS END=32557528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:30:0,82,1103:0,82,255:39,0 chr1 32557529 . T . PASS END=32557529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr1 32557530 . T . PASS END=32557572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1172:0,83,255:36,0 chr1 32557573 . C . PASS END=32557597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,71,255:25,0 chr1 32557598 . G . PASS END=32557598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 32557599 . T . PASS END=32557612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 32560385 . A . PASS END=32560399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,721:0,60,255:25,0 chr1 32560400 . G . PASS END=32560409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:30,0 chr1 32560410 . G . PASS END=32560410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 32560411 . G . PASS END=32560431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1103:0,90,255:30,0 chr1 32560432 . G . PASS END=32560432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 32560433 . G . PASS END=32560433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32560434 . T . PASS END=32560434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 32560435 . G . PASS END=32560451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 32560452 . T . PASS END=32560452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 32560453 . G . PASS END=32560458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 32560459 . C . PASS END=32560459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 32560460 . A . PASS END=32560465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 32560466 . C . PASS END=32560466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 32560467 . A . PASS END=32560522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1117:0,84,255:30,0 chr1 32560523 . T . PASS END=32560547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,71,255:26,0 chr1 32560548 . T . PASS END=32560554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 32560555 . C . PASS END=32560559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 32560560 . T . PASS END=32560572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 32561261 . A . PASS END=32561266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1152:0,88,255:36,0 chr1 32561267 . A . PASS END=32561267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:34,0 chr1 32561268 . G . PASS END=32561348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1325:0,81,255:40,0 chr1 32566043 . G . PASS END=32566160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1103:0,90,255:38,0 chr1 32566161 . C . PASS END=32566163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr1 32566673 . A . PASS END=32566708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:89:0,120,1800:0,237,255:40,0 chr1 32567716 . G . PASS END=32567814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,120,1800:0,126,255:40,0 chr1 32568032 . T . PASS END=32568217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:89:34:0,89,1271:0,89,255:40,0 chr1 32568218 . A . PASS END=32568218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1372:0,68,255:34,0 chr1 32568219 . A . PASS END=32568241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,93,255:37,0 chr1 32568242 . C . PASS END=32568271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,884:0,61,255:25,0 chr1 32568272 . T . PASS END=32568274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 32573732 . A . PASS END=32573735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:35,0 chr1 32608532 . A . PASS END=32608544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,925:0,75,255:26,0 chr1 32608545 . C . PASS END=32608545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 32608546 . A . PASS END=32608552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 32608553 . C . PASS END=32608583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1033:0,87,255:30,0 chr1 32608584 . T . PASS END=32608618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,870:0,68,255:26,0 chr1 32608619 . G . PASS END=32608625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:22:0,41,765:0,41,255:19,0 chr1 32620189 . A . PASS END=32620322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,102,1473:0,102,255:40,0 chr1 32622454 . C . PASS END=32622546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,105,1575:0,118,255:40,0 chr1 32622947 . G . PASS END=32623046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,135,255:40,0 chr1 32623868 . A . PASS END=32623889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:31:0,89,1103:0,89,255:36,0 chr1 32623890 . A . PASS END=32623890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:35,0 chr1 32623891 . G . PASS END=32623960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:37:0,81,1281:0,81,255:40,0 chr1 32623961 . A . PASS END=32623961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1126:0,39,255:28,0 chr1 32623962 . G . PASS END=32623962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,91,255:29,0 chr1 32625001 . T . PASS END=32625132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,114,1468:0,118,255:40,0 chr1 32626216 . G . PASS END=32626304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,125,255:40,0 chr1 32627548 . A . PASS END=32627647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1291:0,81,255:40,0 chr1 32627962 . G . PASS END=32627964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32627965 . T . PASS END=32627965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:25,0 chr1 32627966 . C . PASS END=32627966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32627967 . T . PASS END=32627967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 32627968 . C . PASS END=32627969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 32627970 . T . PASS END=32627970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 32627971 . T . PASS END=32627972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:29,0 chr1 32627973 . T . PASS END=32627973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:28,0 chr1 32627974 . T . PASS END=32627982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1025:0,80,255:32,0 chr1 32627983 . C . PASS END=32627983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 32627984 . T . PASS END=32628046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1158:0,81,255:37,0 chr1 32628047 . A . PASS END=32628047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1272:0,62,255:36,0 chr1 32628048 . T . PASS END=32628085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,91,255:40,0 chr1 32628086 . T . PASS END=32628090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,86,255:26,0 chr1 32628091 . T . PASS END=32628094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:22,0 chr1 32628095 . G . PASS END=32628108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 32628109 . T . PASS END=32628109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:19,0 chr1 32628110 . T . PASS END=32628125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr1 32628836 . G . PASS END=32628914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1202:0,84,255:40,0 chr1 32631706 . G . PASS END=32631710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 32631711 . T . PASS END=32631713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 32631714 . T . PASS END=32631714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 32631715 . A . PASS END=32631727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,738:0,63,255:23,0 chr1 32631728 . T . PASS END=32631728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:21,0 chr1 32631729 . A . PASS END=32631736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:23,0 chr1 32631737 . T . PASS END=32631737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 32631738 . T . PASS END=32631749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,823:0,69,255:26,0 chr1 32631750 . G . PASS END=32631752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 32631753 . C . PASS END=32631754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 32631755 . G . PASS END=32631791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:34,0 chr1 32631792 . T . PASS END=32631792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 32631793 . A . PASS END=32631795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32631796 . T . PASS END=32631827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,901:0,62,255:26,0 chr1 32631828 . A . PASS END=32631828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:20,0 chr1 32631829 . C . PASS END=32631831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32632770 . G . PASS END=32632786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:25,0 chr1 32632787 . T . PASS END=32632787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,901:0,54,255:27,0 chr1 32632788 . A . PASS END=32632872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:29:0,87,922:0,87,255:40,0 chr1 32632873 . C . PASS END=32632873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1302:0,67,255:30,0 chr1 32632874 . A . PASS END=32632889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:32,0 chr1 32632890 . C . PASS END=32632897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 32635483 . G . PASS END=32635490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:31,0 chr1 32635491 . T . PASS END=32635491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr1 32635492 . C . PASS END=32635649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:92:32:0,92,1302:0,92,255:40,0 chr1 32635650 . A . PASS END=32635661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,945:0,60,255:26,0 chr1 32636308 . G . PASS END=32636326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:33,0 chr1 32636327 . T . PASS END=32636327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr1 32636328 . C . PASS END=32636332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:31,0 chr1 32636333 . G . PASS END=32636333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1086:0,41,255:30,0 chr1 32636334 . A . PASS END=32636350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1180:0,85,255:33,0 chr1 32636351 . G . PASS END=32636351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 32636352 . A . PASS END=32636352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1133:0,58,255:33,0 chr1 32636353 . T . PASS END=32636376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1288:0,92,255:37,0 chr1 32636377 . T . PASS END=32636377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1273:0,75,255:33,0 chr1 32636378 . T . PASS END=32636487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1178:0,81,255:40,0 chr1 32636488 . A . PASS END=32636495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1131:0,77,255:26,0 chr1 32645947 . A . PASS END=32645952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 32645953 . A . PASS END=32645953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 32645954 . A . PASS END=32645972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 32645973 . G . PASS END=32645980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:18,0 chr1 32645981 . A . PASS END=32645981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 32645982 . A . PASS END=32646001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 32646002 . G . PASS END=32646020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,738:0,63,255:22,0 chr1 32646021 . A . PASS END=32646059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,637:0,51,255:19,0 chr1 32646060 . T . PASS END=32646060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 32646061 . C . PASS END=32646089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,596:0,48,255:17,0 chr1 32646090 . C . PASS END=32646090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr1 32646091 . A . PASS END=32646110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 32646111 . G . PASS END=32646115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:13,0 chr1 32646843 . G . PASS END=32646849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 32646850 . A . PASS END=32646859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 32646860 . G . PASS END=32646879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:18,0 chr1 32646880 . T . PASS END=32646916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:23,0 chr1 32646917 . A . PASS END=32646917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 32646918 . T . PASS END=32646926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,939:0,75,255:26,0 chr1 32646927 . C . PASS END=32646927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32646928 . A . PASS END=32646943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 32646944 . A . PASS END=32646961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 32646962 . G . PASS END=32646962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 32646963 . A . PASS END=32646978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1202:0,82,255:30,0 chr1 32646979 . T . PASS END=32646979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 32646980 . G . PASS END=32646983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1085:0,90,255:30,0 chr1 32646984 . C . PASS END=32646984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 32646985 . G . PASS END=32646986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 32646987 . C . PASS END=32646987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 32646988 . T . PASS END=32646988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32646989 . G . PASS END=32646990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 32646991 . A . PASS END=32646996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 32646997 . A . PASS END=32646997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:29,0 chr1 32646998 . G . PASS END=32647003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:32,0 chr1 32647004 . G . PASS END=32647004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 32647005 . A . PASS END=32647026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:34,0 chr1 32647027 . A . PASS END=32647028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:26,0 chr1 32647029 . G . PASS END=32647029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 32647030 . G . PASS END=32647030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:29,0 chr1 32647031 . A . PASS END=32647048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 32647049 . A . PASS END=32647049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:27,0 chr1 32647050 . C . PASS END=32647069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,918:0,84,255:29,0 chr1 32647070 . A . PASS END=32647070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,887:0,48,255:28,0 chr1 32647071 . A . PASS END=32647073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 32647074 . A . PASS END=32647074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 32647075 . A . PASS END=32647087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1080:0,90,255:30,0 chr1 32647088 . G . PASS END=32647089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 32647090 . T . PASS END=32647138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1131:0,80,255:32,0 chr1 32647139 . C . PASS END=32647139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 32647140 . A . PASS END=32647143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32647144 . A . PASS END=32647144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:23,0 chr1 32647145 . A . PASS END=32647145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 32647146 . G . PASS END=32647147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 32647148 . C . PASS END=32647148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:27,0 chr1 32647149 . C . PASS END=32647156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 32647157 . A . PASS END=32647157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:29,0 chr1 32647158 . A . PASS END=32647163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1066:0,80,255:33,0 chr1 32647164 . A . PASS END=32647164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:31,0 chr1 32647165 . A . PASS END=32647236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:34:0,90,1229:0,90,255:40,0 chr1 32647237 . T . PASS END=32647237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1275:0,78,255:35,0 chr1 32647238 . C . PASS END=32647277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1157:0,80,255:35,0 chr1 32650126 . G . PASS END=32650191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:35:0,105,1319:0,105,255:40,0 chr1 32650192 . C . PASS END=32650192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1637:0,64,255:40,0 chr1 32650193 . T . PASS END=32650206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:97:37:0,97,1575:0,97,255:40,0 chr1 32650207 . A . PASS END=32650207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 32650208 . T . PASS END=32650208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 32650209 . G . PASS END=32650213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 32650214 . A . PASS END=32650214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 32650215 . C . PASS END=32650215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 32650216 . T . PASS END=32650216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1233:0,31,255:33,0 chr1 32650217 . G . PASS END=32650217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 32653555 . C . PASS END=32653555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 32653556 . T . PASS END=32653559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32653560 . G . PASS END=32653560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 32653561 . G . PASS END=32653573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 32653574 . C . PASS END=32653659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:28:0,82,1039:0,82,255:33,0 chr1 32653660 . G . PASS END=32653660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 32653661 . T . PASS END=32653670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 32653671 . C . PASS END=32653715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 32653716 . C . PASS END=32653725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,49,255:16,0 chr1 32655656 . G . PASS END=32655656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 32655657 . A . PASS END=32655664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,70,255:26,0 chr1 32655665 . G . PASS END=32655665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32655666 . T . PASS END=32655666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:27,0 chr1 32655667 . G . PASS END=32655667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32655668 . C . PASS END=32655668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr1 32655669 . A . PASS END=32655677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 32655678 . G . PASS END=32655678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,1 chr1 32655679 . G . PASS END=32655681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:32:0,61,1115:0,61,255:30,1 chr1 32655682 . G . PASS END=32655682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr1 32655683 . G . PASS END=32655690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:33,0 chr1 32655691 . G . PASS END=32655691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1117:0,60,255:32,0 chr1 32655692 . A . PASS END=32655693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1013:0,99,255:34,0 chr1 32655694 . G . PASS END=32655694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:32,0 chr1 32655695 . C . PASS END=32655774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1258:0,81,255:40,0 chr1 32655775 . C . PASS END=32655775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:32,0 chr1 32655776 . A . PASS END=32655777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:33,0 chr1 32655778 . G . PASS END=32655778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr1 32655779 . C . PASS END=32655781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 32655782 . C . PASS END=32655782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr1 32655783 . G . PASS END=32655790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1133:0,82,255:30,0 chr1 32655791 . A . PASS END=32655791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1004:0,57,255:28,0 chr1 32655792 . A . PASS END=32655795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 32655796 . G . PASS END=32655796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:28,0 chr1 32655797 . G . PASS END=32655797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 32655798 . A . PASS END=32655798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:28,0 chr1 32655799 . G . PASS END=32655799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 32655800 . C . PASS END=32655817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:62:25:0,62,930:0,62,255:26,0 chr1 32655818 . A . PASS END=32655818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:19,0 chr1 32655819 . A . PASS END=32655824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 32655825 . T . PASS END=32655838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,46,255:16,0 chr1 32655839 . C . PASS END=32655850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,495:0,31,255:13,0 chr1 32657912 . C . PASS END=32657914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 32657915 . A . PASS END=32657915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr1 32657916 . T . PASS END=32657916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 32657917 . C . PASS END=32657917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 32657918 . G . PASS END=32657922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 32657923 . A . PASS END=32657923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:29,0 chr1 32657924 . G . PASS END=32657935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1002:0,86,255:36,0 chr1 32657936 . A . PASS END=32657936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr1 32657937 . A . PASS END=32658019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:38:0,93,1380:0,98,255:40,0 chr1 32658020 . G . PASS END=32658023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:96:39:0,96,1440:0,100,255:32,0 chr1 32658024 . A . PASS END=32658024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1307:0,78,255:31,0 chr1 32658025 . G . PASS END=32658026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:39:0,93,1395:0,100,255:32,0 chr1 32658027 . A . PASS END=32658027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:29:39:0,29,1186:0,29,255:27,0 chr1 32658028 . T . PASS END=32658031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1305:0,98,255:30,0 chr1 32658258 . C . PASS END=32658332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,108,1709:0,108,255:40,0 chr1 32658809 . C . PASS END=32658901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:47:0,120,1800:0,141,255:40,0 chr1 32659666 . A . PASS END=32659666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 32659667 . T . PASS END=32659667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 32659668 . G . PASS END=32659670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:29:0,62,1031:0,62,255:30,0 chr1 32659671 . T . PASS END=32659673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32659674 . G . PASS END=32659674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:27,0 chr1 32659675 . A . PASS END=32659676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32659677 . G . PASS END=32659677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,919:0,59,255:27,0 chr1 32659678 . A . PASS END=32659678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32659679 . T . PASS END=32659679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:28,0 chr1 32659680 . C . PASS END=32659680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32659681 . A . PASS END=32659681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1053:0,38,255:27,0 chr1 32659682 . A . PASS END=32659683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32659684 . A . PASS END=32659684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 32659685 . A . PASS END=32659685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,983:0,54,255:28,0 chr1 32659686 . G . PASS END=32659686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 32659687 . C . PASS END=32659688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 32659689 . G . PASS END=32659689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 32659690 . G . PASS END=32659690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,938:0,59,255:29,0 chr1 32659691 . A . PASS END=32659691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 32659692 . G . PASS END=32659692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,935:0,26,255:26,0 chr1 32659693 . A . PASS END=32659693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 32659694 . A . PASS END=32659694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32659695 . A . PASS END=32659695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 32659696 . G . PASS END=32659697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 32659698 . A . PASS END=32659698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:26,0 chr1 32659699 . A . PASS END=32659702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1169:0,80,255:34,0 chr1 32659703 . C . PASS END=32659703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1357:0,48,255:36,0 chr1 32659704 . C . PASS END=32659761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:36:0,87,1305:0,88,255:40,0 chr1 32660503 . A . PASS END=32660507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 32660508 . A . PASS END=32660508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 32660509 . G . PASS END=32660511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 32660512 . C . PASS END=32660512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr1 32660513 . G . PASS END=32660515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:17,0 chr1 32660516 . A . PASS END=32660516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 32660517 . T . PASS END=32660518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 32660519 . A . PASS END=32660519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 32660520 . A . PASS END=32660522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr1 32660523 . A . PASS END=32660523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:17,0 chr1 32660524 . C . PASS END=32660532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 32660533 . C . PASS END=32660533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 32660534 . T . PASS END=32660612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,580:0,40,255:19,0 chr1 32660613 . G . PASS END=32660640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 32660641 . C . PASS END=32660642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32660643 . C . PASS END=32660648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32660649 . C . PASS END=32660666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 32660667 . G . PASS END=32660667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr1 32660668 . C . PASS END=32660682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 32660683 . G . PASS END=32660683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:12,0 chr1 32660684 . C . PASS END=32660695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr1 32660696 . G . PASS END=32660696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 32660697 . C . PASS END=32660697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 32660698 . T . PASS END=32660698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 32660699 . C . PASS END=32660702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 32660703 . C . PASS END=32660703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 32660704 . A . PASS END=32660704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 32660705 . G . PASS END=32660708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:20:12:0,20,410:0,20,255:13,0 chr1 32660709 . C . PASS END=32660711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32660712 . A . PASS END=32660712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 32660713 . G . PASS END=32660713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:11,0 chr1 32660714 . A . PASS END=32660715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:12,0 chr1 32660716 . G . PASS END=32660716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 32660717 . C . PASS END=32660717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 32660718 . G . PASS END=32660718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr1 32660719 . C . PASS END=32660720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 32660721 . T . PASS END=32660722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 32660723 . G . PASS END=32660723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 32660724 . C . PASS END=32660724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 32660725 . T . PASS END=32660726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 32660727 . C . PASS END=32660729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 32660730 . A . PASS END=32660730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 32660731 . G . PASS END=32660731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 32660732 . G . PASS END=32660732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 32660733 . A . PASS END=32660733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 32660734 . G . PASS END=32660734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 32660735 . C . PASS END=32660735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 32660736 . A . PASS END=32660736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 32660737 . C . PASS END=32660738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 32660739 . G . PASS END=32660739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 32660740 . A . PASS END=32660740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 32660741 . G . PASS END=32660741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 32660742 . C . PASS END=32660742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 32660743 . A . PASS END=32660743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:12,0 chr1 32660744 . C . PASS END=32660744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32660745 . A . PASS END=32660745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 32660746 . G . PASS END=32660746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 32660747 . A . PASS END=32660747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 32660748 . A . PASS END=32660748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 32660749 . G . PASS END=32660749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 32660750 . C . PASS END=32660750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32660751 . A . PASS END=32660752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 32660753 . C . PASS END=32660786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 32660787 . C . PASS END=32660796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 32667537 . A . PASS END=32667544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 32667545 . C . PASS END=32667550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32667551 . G . PASS END=32667559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr1 32667560 . G . PASS END=32667561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32667562 . G . PASS END=32667588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,675:0,41,255:19,0 chr1 32667589 . C . PASS END=32667605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,807:0,62,255:25,0 chr1 32667606 . C . PASS END=32667622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 32667623 . G . PASS END=32667623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 32667624 . C . PASS END=32667646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1109:0,90,255:30,0 chr1 32667647 . G . PASS END=32667656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1039:0,71,255:26,0 chr1 32667657 . C . PASS END=32667670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 32667671 . A . PASS END=32667681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32667682 . A . PASS END=32667682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 32667683 . G . PASS END=32667700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,962:0,78,255:26,0 chr1 32667822 . A . PASS END=32667866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:38:0,88,1396:0,88,255:40,0 chr1 32667867 . A . PASS END=32667867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1205:0,73,255:30,0 chr1 32667868 . C . PASS END=32667876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr1 32667877 . A . PASS END=32667877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:32,0 chr1 32667878 . A . PASS END=32667895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1083:0,86,255:34,0 chr1 32667896 . C . PASS END=32667902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 32667903 . C . PASS END=32667909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:31,0 chr1 32669480 . A . PASS END=32669646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:36:0,92,1151:0,92,255:40,0 chr1 32669787 . G . PASS END=32670035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1227:0,83,255:40,0 chr1 32670036 . C . PASS END=32670036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 32670037 . A . PASS END=32670038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1327:0,95,255:34,0 chr1 32670039 . A . PASS END=32670039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr1 32670040 . C . PASS END=32670041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1349:0,98,255:34,0 chr1 32670042 . C . PASS END=32670042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 32670043 . C . PASS END=32670047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 32670048 . G . PASS END=32670049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1245:0,75,255:34,0 chr1 32670050 . C . PASS END=32670059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1217:0,89,255:33,0 chr1 32670060 . C . PASS END=32670060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:31,0 chr1 32670061 . C . PASS END=32670070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1239:0,86,255:34,0 chr1 32670071 . A . PASS END=32670071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:32,0 chr1 32670072 . A . PASS END=32670079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1310:0,92,255:33,0 chr1 32670080 . G . PASS END=32670080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:33,0 chr1 32670081 . T . PASS END=32670084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:34,0 chr1 32670085 . T . PASS END=32670085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:30,0 chr1 32670086 . G . PASS END=32670094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1270:0,89,255:32,0 chr1 32670095 . A . PASS END=32670099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:60:33:0,60,1082:0,60,255:29,0 chr1 32670100 . T . PASS END=32670103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:30,0 chr1 32670104 . C . PASS END=32670104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:29,0 chr1 32670105 . C . PASS END=32670107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 32670108 . T . PASS END=32670110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 32670111 . A . PASS END=32670113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 32670114 . T . PASS END=32670115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:26,0 chr1 32670116 . C . PASS END=32670119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 32670120 . G . PASS END=32670120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1070:0,41,255:26,0 chr1 32670121 . A . PASS END=32670121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:25,0 chr1 32670122 . A . PASS END=32670124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,1084:0,41,255:27,0 chr1 32670125 . T . PASS END=32670125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:15:31:0,15,964:0,15,255:26,0 chr1 32670126 . A . PASS END=32670126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:27,0 chr1 32670127 . G . PASS END=32670127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1031:0,38,255:26,0 chr1 32670199 . C . PASS END=32670357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:29:0,80,1169:0,80,255:40,0 chr1 32670358 . C . PASS END=32670358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 32670359 . C . PASS END=32670359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32670360 . C . PASS END=32670365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 32670366 . C . PASS END=32670386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,53,255:19,0 chr1 32670387 . T . PASS END=32670387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 32670388 . C . PASS END=32670399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 32670795 . C . PASS END=32670804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1465:0,104,255:40,0 chr1 32670805 . C . PASS END=32670841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,104,1465:0,104,255:40,0 chr1 32670842 . C A, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=3.153;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:10,10,0:9,9,0:48:85,0,50,679,680,1359:255,0,255:15,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,8,11:12,7,9,10 chr1 32670843 . T . PASS END=32670845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 32670846 . G . PASS END=32670846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:31,0 chr1 32670847 . T . PASS END=32670849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:32,0 chr1 32671283 . A . PASS END=32671286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:9,0 chr1 32671287 . A . PASS END=32671287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 32671288 . G . PASS END=32671295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 32671296 . T . PASS END=32671296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 32671297 . G . PASS END=32671309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 32671310 . G . PASS END=32671336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 32671337 . G . LowGQ END=32671337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 32671338 . C . PASS END=32671350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 32671351 . G . PASS END=32671369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:18,0 chr1 32671370 . A . PASS END=32671370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 32671371 . T . PASS END=32671378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 32671379 . T . PASS END=32671379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:16,0 chr1 32671380 . C . PASS END=32671383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 32671384 . T . PASS END=32671439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,786:0,63,255:23,0 chr1 32671440 . C . PASS END=32671447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr1 32671448 . A . PASS END=32671448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:18,0 chr1 32671449 . T . PASS END=32671470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 32671471 . T . PASS END=32671472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 32671473 . A . PASS END=32671481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 32671482 . G . PASS END=32671482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 32671483 . G . PASS END=32671508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 32671509 . G . PASS END=32671519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 32671520 . C . PASS END=32671548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 32671549 . C . PASS END=32671549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 32671550 . G . PASS END=32671550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 32671551 . G . PASS END=32671553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 32671554 . A . PASS END=32671555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32671556 . A . PASS END=32671556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,250:0,13,250:8,0 chr1 32671557 . G . PASS END=32671558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 32671559 . C . PASS END=32671562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 32671563 . A . PASS END=32671563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:8,0 chr1 32671564 . G . PASS END=32671564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 32671755 . G . PASS END=32671755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 32671756 . C . PASS END=32671756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 32671757 . C . PASS END=32671758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 32671759 . G . PASS END=32671761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 32671762 . T . PASS END=32671762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,875:0,34,255:24,0 chr1 32671763 . C . PASS END=32671766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32671767 . G . PASS END=32671767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32671768 . G . PASS END=32671770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32671771 . T . PASS END=32671772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,992:0,70,255:26,0 chr1 32671773 . T . PASS END=32671776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32671777 . T . PASS END=32671777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 32671778 . C . PASS END=32671778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32671779 . C . PASS END=32671779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 32671780 . G . PASS END=32671780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr1 32671781 . A . PASS END=32671797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1033:0,82,255:32,0 chr1 32671798 . T . PASS END=32671798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:30,0 chr1 32671799 . G . PASS END=32671854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:33:0,92,1288:0,92,255:37,0 chr1 32671855 . A . PASS END=32671855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:30,0 chr1 32671856 . G . PASS END=32671866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1149:0,80,255:31,0 chr1 32671867 . G . PASS END=32671867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 32671868 . C . PASS END=32671868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:27,0 chr1 32671869 . C . PASS END=32671882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:25:0,72,1070:0,74,255:25,0 chr1 32671883 . G . PASS END=32671883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 32671884 . C . PASS END=32671884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:20,0 chr1 32671885 . G . PASS END=32671895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,62,255:23,0 chr1 32671896 . G . PASS END=32671897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 32671898 . G . PASS END=32671898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 32672110 . A . PASS END=32672116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 32672117 . A . PASS END=32672117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,857:0,67,255:27,0 chr1 32672118 . A . PASS END=32672128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:30,0 chr1 32672129 . C . PASS END=32672129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 32672130 . C . PASS END=32672323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:30:0,83,1058:0,83,255:40,0 chr1 32672324 . A . PASS END=32672324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 32672325 . A . PASS END=32672335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32672336 . G . PASS END=32672362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:25,0 chr1 32672603 . A . PASS END=32672707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1305:0,88,255:40,0 chr1 32672708 . A . PASS END=32672708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1113:0,55,255:28,0 chr1 32672709 . T . PASS END=32672717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,85,255:29,0 chr1 32672718 . G . PASS END=32672719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:61:33:0,61,1170:0,61,255:26,0 chr1 32672720 . A . PASS END=32672721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 32672841 . T . PASS END=32672846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,876:0,61,255:25,0 chr1 32672847 . C . PASS END=32672847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 32672848 . T . PASS END=32672852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,730:0,61,255:25,0 chr1 32672853 . A . PASS END=32672853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 32672854 . A . PASS END=32672857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,787:0,61,255:25,0 chr1 32672858 . A . PASS END=32672858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,829:0,31,255:24,0 chr1 32672859 . A . PASS END=32672877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,811:0,61,255:26,0 chr1 32672878 . C . PASS END=32672878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,776:0,9,255:24,0 chr1 32672879 . G . PASS END=32672899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,939:0,64,255:26,0 chr1 32672900 . C . PASS END=32672906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 32672907 . T . PASS END=32672907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32672908 . T . PASS END=32672911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32672912 . A . PASS END=32672922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 32672923 . A . PASS END=32672923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:23,0 chr1 32672924 . A . PASS END=32672931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 32672932 . G . PASS END=32672939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 32672940 . G . PASS END=32672943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 32672944 . A . PASS END=32672945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32672946 . T . PASS END=32672948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 32672949 . C . PASS END=32672949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 32672950 . A . PASS END=32672950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 32672951 . A . PASS END=32672971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 32672972 . C . PASS END=32672974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 32672975 . G . PASS END=32673248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1075:0,83,255:40,0 chr1 32673249 . C . PASS END=32673250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 32673251 . G . PASS END=32673259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 32673260 . A . PASS END=32673261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 32673262 . G . PASS END=32673273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:29,0 chr1 32673274 . G . PASS END=32673274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 32673275 . G . PASS END=32673276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1057:0,87,255:29,0 chr1 32673277 . A . PASS END=32673277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 32673278 . C . PASS END=32673280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32673281 . T . PASS END=32673305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 32673306 . C . PASS END=32673306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32673307 . T . PASS END=32673307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:25,0 chr1 32673308 . G . PASS END=32673313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 32673314 . A . PASS END=32673314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 32673315 . C . PASS END=32673315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32673316 . T . PASS END=32673330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,929:0,65,255:26,0 chr1 32673331 . A . PASS END=32673331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32673332 . T . PASS END=32673351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,854:0,64,255:26,0 chr1 32673352 . G . PASS END=32673356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 32673357 . C . PASS END=32673357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 32673358 . T . PASS END=32673358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32673359 . A . PASS END=32673359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 32673360 . G . PASS END=32673360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32673361 . A . PASS END=32673361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:25,0 chr1 32673362 . C . PASS END=32673364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32673365 . C . PASS END=32673365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 32673366 . A . PASS END=32673366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 32673367 . A . PASS END=32673382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,953:0,62,255:26,0 chr1 32673383 . A . PASS END=32673388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 32673389 . C . PASS END=32673390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32673391 . G . PASS END=32673392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32673393 . A . PASS END=32673393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 32673394 . C . PASS END=32673401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1019:0,87,255:29,0 chr1 32673402 . T . PASS END=32673402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,879:0,70,255:27,0 chr1 32673403 . T . PASS END=32673414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1164:0,83,255:30,0 chr1 32673415 . A . PASS END=32673415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:28,0 chr1 32673416 . G . PASS END=32673424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1131:0,80,255:30,0 chr1 32673425 . C . PASS END=32673425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:30,0 chr1 32673426 . A . PASS END=32673433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1135:0,93,255:31,0 chr1 32673434 . T . PASS END=32673439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1124:0,77,255:26,0 chr1 32673440 . C . PASS END=32673441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32673442 . T . PASS END=32673453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1039:0,71,255:26,0 chr1 32673454 . A . PASS END=32673454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:25,0 chr1 32673455 . G . PASS END=32673456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:29,0 chr1 32673457 . A . PASS END=32673457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:28,0 chr1 32673458 . T . PASS END=32673458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 32673459 . A . PASS END=32673469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 32673470 . T . PASS END=32673488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1006:0,68,255:26,0 chr1 32673489 . C . PASS END=32673489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr1 32673490 . C . PASS END=32673501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 32673502 . C . PASS END=32673504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 32673505 . C . PASS END=32673525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,959:0,65,255:26,0 chr1 32673526 . A . PASS END=32673527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 32673528 . G . PASS END=32673535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:26,0 chr1 32673536 . C . PASS END=32673537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32673538 . A . PASS END=32673538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,846:0,51,255:24,0 chr1 32673539 . T . PASS END=32673541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 32673542 . G . PASS END=32673545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 32673546 . A . PASS END=32673546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 32673547 . G . PASS END=32673547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32673548 . T . PASS END=32673557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:26,0 chr1 32673558 . C . PASS END=32673572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:31,0 chr1 32673573 . A . PASS END=32673573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 32673574 . C . PASS END=32673586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,86,255:28,0 chr1 32673587 . A . PASS END=32673602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 32673603 . A . PASS END=32673625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,873:0,81,255:29,0 chr1 32673626 . C . PASS END=32673627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 32673628 . G . PASS END=32673632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 32673633 . G . PASS END=32673672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,776:0,66,255:26,0 chr1 32673673 . C . PASS END=32673683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 32674695 . A . PASS END=32674916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1047:0,84,255:40,0 chr1 32674917 . G . PASS END=32674960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,861:0,69,255:25,0 chr1 32676845 . A . PASS END=32676924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,178,255:40,0 chr1 32677362 . G . PASS END=32677434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1350:0,92,255:40,0 chr1 32677435 . T . PASS END=32677438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 32677671 . T . PASS END=32677681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr1 32677682 . A . PASS END=32677682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 32677683 . T . PASS END=32677696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,853:0,61,255:26,0 chr1 32677697 . G . PASS END=32677705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr1 32677706 . T . PASS END=32677706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 32677707 . T . PASS END=32677728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr1 32677729 . G . PASS END=32677729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr1 32677730 . C . PASS END=32677730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 32677731 . C . PASS END=32677731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 32677732 . A . PASS END=32677746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1178:0,83,255:31,0 chr1 32677747 . A . PASS END=32677747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:28,0 chr1 32677748 . C . PASS END=32677780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:32,0 chr1 32677781 . T . PASS END=32677792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,90,255:26,0 chr1 32677793 . C . PASS END=32677795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:19,0 chr1 32677796 . T . PASS END=32677796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr1 32677797 . G . PASS END=32677802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 32678091 . A . PASS END=32678098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,854:0,69,255:24,0 chr1 32678099 . C . PASS END=32678109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:30,0 chr1 32678110 . C . PASS END=32678110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 32678111 . T . PASS END=32678188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,87,255:38,0 chr1 32678189 . C . PASS END=32678212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 32678213 . G . PASS END=32678213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:26,1 chr1 32678214 . C . PASS END=32678214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:32:0,61,1123:0,61,255:26,1 chr1 32678215 . C . PASS END=32678215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr1 32678216 . C . PASS END=32678239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 32678240 . A . PASS END=32678241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1102:0,77,255:26,0 chr1 32678242 . G . PASS END=32678242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32678243 . T . PASS END=32678244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 32678245 . T . PASS END=32678246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 32678247 . T . PASS END=32678247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:26,0 chr1 32678248 . G . PASS END=32678254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1163:0,80,255:28,0 chr1 32678255 . G . PASS END=32678287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 32678288 . C . PASS END=32678289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 32678290 . C . PASS END=32678291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32678292 . G . PASS END=32678300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32678301 . T . PASS END=32678309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:24,0 chr1 32678310 . T . PASS END=32678310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:21,0 chr1 32678311 . C . PASS END=32678314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 32678315 . G . PASS END=32678315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 32678316 . C . PASS END=32678316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32678317 . C . PASS END=32678317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 32678318 . C . PASS END=32678327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,930:0,62,255:25,0 chr1 32678328 . T . PASS END=32678328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 32678329 . A . PASS END=32678331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32678332 . A . PASS END=32678332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 32678333 . G . PASS END=32678334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32678335 . C . PASS END=32678335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 32678336 . T . PASS END=32678357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,884:0,72,255:24,0 chr1 32678358 . A . PASS END=32678366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 32678367 . C . PASS END=32678370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 32678371 . A . PASS END=32678389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,652:0,43,255:17,0 chr1 32678390 . A . PASS END=32678390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 32678391 . G . PASS END=32678395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 32678396 . T . PASS END=32678396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 32678397 . A . PASS END=32678403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 32678404 . G . PASS END=32678404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 32678405 . C . PASS END=32678406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 32678407 . G . PASS END=32678411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,31,255:11,0 chr1 32678412 . C . PASS END=32678425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,333:0,27,255:9,0 chr1 32678426 . A . PASS END=32678426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 32678427 . A . PASS END=32678439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 32680398 . G . PASS END=32680416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 32680417 . A . PASS END=32680420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 32680421 . A . PASS END=32680421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32680422 . A . PASS END=32680431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:25,0 chr1 32680432 . C . PASS END=32680434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 32680435 . C . PASS END=32680435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 32680436 . A . PASS END=32680531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1203:0,93,255:39,0 chr1 32680532 . A . PASS END=32680532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 32680533 . G . PASS END=32680533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 32680800 . T . PASS END=32680817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,112,1792:0,112,255:40,0 chr1 32681041 . G . PASS END=32681149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,105,1575:0,114,255:40,1 chr1 32681274 . C . PASS END=32681285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 32681286 . G . PASS END=32681286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr1 32681287 . G . PASS END=32681309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1050:0,87,255:30,0 chr1 32681310 . T . PASS END=32681310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 32681311 . C . PASS END=32681314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 32681315 . C . PASS END=32681324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,76,255:25,0 chr1 32681325 . G . PASS END=32681325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 32681326 . T . PASS END=32681332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1059:0,60,255:26,0 chr1 32681333 . C . PASS END=32681333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,994:0,16,255:27,0 chr1 32681334 . C . PASS END=32681334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32681335 . T . PASS END=32681335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 32681336 . C . PASS END=32681337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 32681338 . T . PASS END=32681343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:28,0 chr1 32681344 . A . PASS END=32681344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 32681345 . G . PASS END=32681350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:49:29:0,49,967:0,49,255:28,0 chr1 32681351 . G . PASS END=32681351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 32681352 . A . PASS END=32681354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 32681355 . C . PASS END=32681356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 32681357 . G . PASS END=32681360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:22,0 chr1 32681361 . A . PASS END=32681361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 32681362 . T . PASS END=32681362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:20,0 chr1 32681363 . A . PASS END=32681363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:18,0 chr1 32681364 . C . PASS END=32681366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:42:27:0,42,953:0,42,255:19,0 chr1 32681367 . A . PASS END=32681373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,770:0,30,255:20,0 chr1 32681374 . C . PASS END=32681374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 32681375 . A . PASS END=32681375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:15,0 chr1 32681376 . T . PASS END=32681376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:14,0 chr1 32681377 . T . PASS END=32681378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:13,0 chr1 32681379 . T . PASS END=32681380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 32681381 . T . PASS END=32681383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:13,0 chr1 32681384 . G . PASS END=32681385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr1 32681386 . C . PASS END=32681386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 32681387 . C . PASS END=32681387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 32681388 . T . PASS END=32681388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr1 32681389 . T . PASS END=32681389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 32681390 . C . PASS END=32681393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 32681394 . C . PASS END=32681396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32681403 . A . PASS END=32681403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 32681404 . G . PASS END=32681422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 32681423 . A . PASS END=32681462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr1 32681463 . G . PASS END=32681473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:9,0 chr1 32681474 . C . PASS END=32681479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 32681480 . C . PASS END=32681498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 32682011 . T . PASS END=32682049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:93:37:0,93,1327:0,93,255:40,0 chr1 32682050 . T . PASS END=32682050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:73:46:0,73,1294:0,73,255:40,0 chr1 32682051 . T . PASS END=32682118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:34:0,93,1395:0,101,255:40,0 chr1 32682454 . T . PASS END=32682520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1098:0,81,255:40,0 chr1 32682521 . A . PASS END=32682548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,135,255:40,0 chr1 32682568 . T . PASS END=32682595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,143,255:40,0 chr1 32682596 . G . PASS END=32682661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,93,255:40,0 chr1 32682662 . C . PASS END=32682671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1031:0,70,255:26,0 chr1 32682672 . T . PASS END=32682698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1157:0,83,255:34,0 chr1 32682699 . T . PASS END=32682699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:34,0 chr1 32682700 . C . PASS END=32682726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1213:0,89,255:35,0 chr1 32682727 . T . PASS END=32682727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:29,0 chr1 32682728 . G . PASS END=32682758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1164:0,80,255:32,0 chr1 32682759 . T . PASS END=32682759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 32682760 . G . PASS END=32682771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:36,0 chr1 32682772 . T . PASS END=32682772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 32682773 . C . PASS END=32682786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:35,0 chr1 32682787 . T . PASS END=32682787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1227:0,59,255:34,0 chr1 32682788 . C . PASS END=32682789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:33,0 chr1 32682790 . G . PASS END=32682952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1210:0,86,255:40,0 chr1 32683123 . T . PASS END=32683178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1421:0,81,255:40,0 chr1 32686732 . C . PASS END=32686748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,106,1299:0,106,255:40,0 chr1 32686749 . A . PASS END=32686749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:62:44:0,62,1439:0,62,255:40,0 chr1 32686750 . G . PASS END=32686798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,105,1399:0,106,255:40,0 chr1 32687468 . C . PASS END=32687481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 32687482 . A . PASS END=32687482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 32687483 . G . PASS END=32687485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 32687486 . G . PASS END=32687486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 32687487 . G . PASS END=32687497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,523:0,48,255:17,0 chr1 32687498 . C . PASS END=32687498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 32687499 . T . PASS END=32687499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 32687500 . G . PASS END=32687500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 32687501 . T . PASS END=32687512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr1 32687513 . G . PASS END=32687519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,760:0,60,255:21,0 chr1 32687520 . G . PASS END=32687520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 32687521 . T . PASS END=32687576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,747:0,63,255:24,0 chr1 32687577 . C . PASS END=32687614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr1 32687615 . C . PASS END=32687617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32687618 . C . PASS END=32687619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32687908 . C . PASS END=32687923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1255:0,86,255:33,0 chr1 32688043 . A . PASS END=32688045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 32688139 . A . PASS END=32688149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32688150 . A . PASS END=32688150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 32688151 . C . PASS END=32688155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 32688156 . G . PASS END=32688157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32688158 . G . PASS END=32688162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 32688163 . G . PASS END=32688163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 32688164 . A . PASS END=32688185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 32688186 . G . PASS END=32688186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 32688187 . T . PASS END=32688187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,693:0,39,255:20,0 chr1 32688188 . A . PASS END=32688198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:22,0 chr1 32688199 . G . PASS END=32688199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 32688200 . G . PASS END=32688200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32688201 . A . PASS END=32688201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 32688202 . G . PASS END=32688210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 32688211 . T . PASS END=32688211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 32688212 . T . PASS END=32688224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 32688225 . G . PASS END=32688231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 32689635 . A . PASS END=32689722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:96:42:0,96,1485:0,96,255:40,0 chr1 32690011 . G . PASS END=32690076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:38:0,96,1365:0,98,255:40,0 chr1 32691772 . G . PASS END=32691921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:40:0,99,1444:0,99,255:40,0 chr1 32692004 . A . PASS END=32692118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,101,1638:0,101,255:40,0 chr1 32692119 . G . PASS END=32692127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:89:48:0,89,1395:0,89,255:39,0 chr1 32692128 . C . PASS END=32692131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:72:41:0,72,1080:0,76,255:28,0 chr1 32694100 . T . PASS END=32694210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:40:0,96,1440:0,107,255:40,0 chr1 32694328 . C . PASS END=32694347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:44:0,91,1406:0,91,255:40,0 chr1 32694348 . T . PASS END=32694348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1460:0,66,255:40,0 chr1 32694349 . G . PASS END=32694402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:42:0,83,1350:0,83,255:40,0 chr1 32694403 . C . PASS END=32694417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:64:27:0,64,899:0,64,255:26,0 chr1 32694736 . G . PASS END=32694809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:35:0,92,1288:0,92,255:40,0 chr1 32696528 . G . PASS END=32696620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1227:0,81,255:40,0 chr1 32696716 . C . PASS END=32696749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,89,255:34,0 chr1 32696750 . A . PASS END=32696751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:25,0 chr1 32696752 . C . PASS END=32696780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1089:0,80,255:33,0 chr1 32696781 . T . PASS END=32696781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 32696782 . T . PASS END=32696797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:32,0 chr1 32713023 . A . PASS END=32713023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 32713024 . T . PASS END=32713065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 32713066 . A . PASS END=32713066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 32713067 . C . PASS END=32713077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 32713078 . A . PASS END=32713080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32713081 . A . PASS END=32713081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 32713082 . G . PASS END=32713086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr1 32713087 . A . PASS END=32713087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32713088 . G . PASS END=32713128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,630:0,40,255:19,0 chr1 32713129 . T . PASS END=32713133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 32713134 . A . PASS END=32713149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:18,0 chr1 32713150 . A . PASS END=32713150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 32713151 . T . PASS END=32713169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 32713170 . G . PASS END=32713198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 32713199 . A . PASS END=32713207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr1 32713208 . T . PASS END=32713208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 32713209 . G . PASS END=32713228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 32713229 . C . PASS END=32713239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32713240 . T . PASS END=32713240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 32713241 . C . PASS END=32713258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32713259 . C . PASS END=32713260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 32713261 . T . PASS END=32713283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 32713972 . C . PASS END=32713973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 32713974 . G . PASS END=32713984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 32713985 . C . PASS END=32714014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:23,0 chr1 32714015 . T . PASS END=32714015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 32714016 . G . PASS END=32714039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,886:0,72,255:26,0 chr1 32714040 . A . PASS END=32714047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 32714048 . T . PASS END=32714054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 32714055 . A . PASS END=32714062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1119:0,80,255:31,0 chr1 32714063 . A . PASS END=32714063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 32714064 . C . PASS END=32714118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1149:0,83,255:33,0 chr1 32714119 . G . PASS END=32714119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 32714120 . C . PASS END=32714158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1100:0,87,255:31,0 chr1 32714159 . T . PASS END=32714164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr1 32714165 . G . PASS END=32714165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 32714166 . C . PASS END=32714196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr1 32714197 . T . PASS END=32714197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 32714198 . G . PASS END=32714198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32714199 . C . PASS END=32714199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 32714200 . T . PASS END=32714202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32739799 . A . PASS END=32739799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 32739800 . T . PASS END=32739800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 32739801 . G . PASS END=32739801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 32739802 . G . PASS END=32739807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 32739808 . C . PASS END=32739808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 32739809 . C . PASS END=32739819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 32739820 . A . PASS END=32739820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 32739821 . A . PASS END=32739838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:23,0 chr1 32739839 . A . PASS END=32739841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 32739842 . T . PASS END=32739843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 32739844 . C . PASS END=32739844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 32739845 . C . PASS END=32739853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 32739854 . G . PASS END=32739854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 32739855 . C . PASS END=32739864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 32739865 . T . PASS END=32739866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 32739867 . T . PASS END=32739873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,815:0,69,255:24,0 chr1 32739874 . G . PASS END=32739874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 32739875 . G . PASS END=32739876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32739877 . G . PASS END=32739877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 32739878 . G . PASS END=32739890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,840:0,61,255:22,0 chr1 32739891 . G . PASS END=32739895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:21,0 chr1 32739896 . C . PASS END=32739897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32739898 . C . PASS END=32739898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 32739899 . C . PASS END=32739905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:26:0,67,947:0,67,255:26,0 chr1 32739906 . C . PASS END=32739906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32739907 . C . PASS END=32739908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1131:0,77,255:27,0 chr1 32739909 . C . PASS END=32739993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:30:0,84,1164:0,85,255:40,0 chr1 32739994 . A . PASS END=32739994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1378:0,76,255:36,0 chr1 32739995 . A . PASS END=32740014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1286:0,92,255:39,0 chr1 32740015 . C . PASS END=32740015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:28,0 chr1 32740016 . C . PASS END=32740027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:30,0 chr1 32740028 . A . PASS END=32740028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 32740029 . G . PASS END=32740029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32740030 . G . PASS END=32740030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 32740031 . G . PASS END=32740031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32740032 . C . PASS END=32740035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,76,255:26,0 chr1 32740338 . C . PASS END=32740368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1250:0,91,255:37,0 chr1 32740369 . A . PASS END=32740369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:36,0 chr1 32740370 . C . PASS END=32740372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 32740373 . A . PASS END=32740373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1311:0,62,255:36,0 chr1 32740374 . C . PASS END=32740394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1396:0,84,255:40,0 chr1 32740395 . A . PASS END=32740395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1312:0,73,255:36,0 chr1 32740396 . A . PASS END=32740514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1249:0,84,255:38,0 chr1 32740515 . T . PASS END=32740515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1070:0,69,255:28,0 chr1 32740516 . T . PASS END=32740586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1294:0,92,255:36,0 chr1 32740587 . T . PASS END=32740587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1181:0,77,255:34,0 chr1 32740588 . T . PASS END=32740633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1039:0,92,255:38,0 chr1 32740634 . C . PASS END=32740634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:31,0 chr1 32740635 . G . PASS END=32740657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:32,0 chr1 32740658 . G . PASS END=32740658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 32740659 . G . PASS END=32740659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 32740660 . G . PASS END=32740681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,62,255:26,0 chr1 32740682 . G . PASS END=32740684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:18,0 chr1 32740918 . G . PASS END=32740918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 32740922 . G . PASS END=32740927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:31,0 chr1 32740928 . C . PASS END=32740928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 32740929 . G . PASS END=32740969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1305:0,90,255:36,0 chr1 32740970 . C . PASS END=32740970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1148:0,64,255:31,0 chr1 32740971 . T . PASS END=32741017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1038:0,80,255:34,0 chr1 32741018 . A . PASS END=32741018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:27,0 chr1 32741019 . C . PASS END=32741020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 32741170 . C . PASS END=32741170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32741171 . T . PASS END=32741200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,873:0,75,255:26,0 chr1 32741201 . G . PASS END=32741201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:22,0 chr1 32741202 . C . PASS END=32741208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:23,0 chr1 32741209 . G . PASS END=32741209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 32741210 . C . PASS END=32741210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 32741211 . A . PASS END=32741211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 32741212 . G . PASS END=32741212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 32741213 . C . PASS END=32741214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 32741215 . C . PASS END=32741222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 32741223 . C . PASS END=32741224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,828:0,53,255:19,0 chr1 32741225 . G . PASS END=32741239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 32741240 . T . PASS END=32741240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 32741241 . C . PASS END=32741245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 32741246 . C . PASS END=32741246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 32741247 . T . PASS END=32741247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32741248 . C . PASS END=32741248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 32741249 . A . PASS END=32741253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32741254 . G . PASS END=32741256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 32741257 . G . PASS END=32741257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:17,0 chr1 32741258 . A . PASS END=32741273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 32741515 . G . PASS END=32741664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:84:33:0,84,1260:0,98,255:40,0 chr1 32741667 . G . PASS END=32741667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 32741938 . A . PASS END=32741950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 32741951 . G . PASS END=32741955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:16,0 chr1 32741956 . G . PASS END=32741956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 32741957 . C . PASS END=32741966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,714:0,54,255:19,0 chr1 32741967 . A . PASS END=32741987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 32741988 . A . PASS END=32741988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr1 32741989 . A . PASS END=32742051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:23,0 chr1 32742052 . A . PASS END=32742055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 32742056 . G . PASS END=32742068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:21,0 chr1 32742069 . C . PASS END=32742090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:19,0 chr1 32742208 . G . PASS END=32742211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1033:0,73,255:26,0 chr1 32742212 . C . PASS END=32742220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 32742221 . G . PASS END=32742221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 32742222 . C . PASS END=32742228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 32742229 . A . PASS END=32742229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1023:0,41,255:29,0 chr1 32742230 . G . PASS END=32742238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 32742239 . G . PASS END=32742241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1154:0,63,255:32,1 chr1 32742242 . G . PASS END=32742279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1119:0,85,255:35,0 chr1 32742280 . T . PASS END=32742280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr1 32742281 . G . PASS END=32742288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:35,0 chr1 32742289 . C . PASS END=32742289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:29,0 chr1 32742290 . C . PASS END=32742324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1156:0,83,255:33,0 chr1 32742325 . T . PASS END=32742344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:29,0 chr1 32742345 . A . PASS END=32742356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 32742357 . A . PASS END=32742357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr1 32742358 . T . PASS END=32742364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 32742365 . C . PASS END=32742365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 32742366 . A . PASS END=32742370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32742371 . T . PASS END=32742387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,46,255:19,0 chr1 32745182 . A . PASS END=32745210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:35:0,93,1268:0,93,255:40,0 chr1 32745211 . A . PASS END=32745211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1588:0,72,255:40,0 chr1 32745212 . A . PASS END=32745348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,102,1492:0,102,255:40,0 chr1 32745442 . A . PASS END=32745594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:96:38:0,96,1395:0,96,255:40,0 chr1 32745595 . G . PASS END=32745595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1541:0,77,255:36,0 chr1 32745680 . G . PASS END=32745807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:35:0,96,1406:0,104,255:40,0 chr1 32745808 . C . PASS END=32745811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 32751115 . G . PASS END=32751115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,844:0,28,255:19,0 chr1 32751116 . G . PASS END=32751124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,856:0,61,255:26,0 chr1 32751125 . C . PASS END=32751145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,942:0,81,255:29,0 chr1 32751146 . G . PASS END=32751146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 32751147 . G . PASS END=32751172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1078:0,87,255:40,0 chr1 32751173 . T . PASS END=32751173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1471:0,71,255:40,0 chr1 32751174 . G . PASS END=32751174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 32751175 . A . PASS END=32751175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1388:0,54,255:38,0 chr1 32751176 . C . PASS END=32751179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1468:0,87,255:40,0 chr1 32751180 . T . PASS END=32751180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:38,0 chr1 32751181 . G . PASS END=32751191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:41:0,84,1442:0,84,255:40,0 chr1 32751192 . C . PASS END=32751192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1434:0,76,255:35,0 chr1 32751193 . T . PASS END=32751199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:41:0,84,1407:0,84,255:39,0 chr1 32751200 . A . PASS END=32751200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1289:0,54,255:36,0 chr1 32751201 . C . PASS END=32751236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1353:0,81,255:40,0 chr1 32751237 . C . PASS END=32751237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1321:0,43,255:37,0 chr1 32751238 . G . PASS END=32751241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 32751242 . C . PASS END=32751242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1333:0,65,255:36,0 chr1 32751243 . A . PASS END=32751293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1225:0,86,255:36,0 chr1 32751294 . G . PASS END=32751309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,81,255:25,0 chr1 32751310 . A . PASS END=32751317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:23:0,42,630:0,65,255:14,0 chr1 32756439 . T C, 49.78 PASS DP=38;MQ=250.00;MQRankSum=5.248;ReadPosRankSum=-0.365;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,18,0:0.474,0.000:38:7,9,0:13,9,0:48:85,0,50,636,715,1351:255,0,255:20,0:4.9776e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,10,8:14,6,7,11 chr1 32757771 . A . PASS END=32757774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 32757775 . C . PASS END=32757775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 32757776 . G . PASS END=32757777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 32757778 . A . PASS END=32757778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 32757779 . G . PASS END=32757779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 32757780 . A . PASS END=32757784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 32757785 . G . PASS END=32757789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 32757790 . C . PASS END=32757790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 32757791 . C . PASS END=32757799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:24,0 chr1 32757800 . A . PASS END=32757800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 32757801 . G . PASS END=32757815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 32757816 . G . PASS END=32757819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:17,0 chr1 32768222 . G . PASS END=32768334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:41:0,93,1488:0,93,255:40,0 chr1 32782266 . C . PASS END=32782381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1043:0,87,255:40,0 chr1 32782382 . A . PASS END=32782382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 32782383 . T . PASS END=32782383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 32790080 . T . PASS END=32790154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:50:0,120,1800:0,150,255:40,0 chr1 32792540 . C . PASS END=32792674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:35:0,81,1215:0,99,255:40,0 chr1 32792675 . T . PASS END=32792678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:23,0 chr1 32793137 . G . PASS END=32793141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,909:0,78,255:26,0 chr1 32793142 . A . PASS END=32793164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:35,0 chr1 32793165 . A . PASS END=32793165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1187:0,66,255:34,0 chr1 32793166 . T . PASS END=32793169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:36,0 chr1 32793170 . T . PASS END=32793171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:34,0 chr1 32793172 . T . PASS END=32793184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:36,0 chr1 32793185 . C . PASS END=32793185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:34,0 chr1 32793186 . G . PASS END=32793239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1260:0,80,255:37,0 chr1 32793240 . A . PASS END=32793249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 32793250 . A . PASS END=32793250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:21,0 chr1 32793251 . G . PASS END=32793254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:22,0 chr1 32793255 . T . PASS END=32793257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:18,0 chr1 32793258 . C . PASS END=32793260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 32793261 . G . PASS END=32793261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:19,0 chr1 32793262 . G . PASS END=32793278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 32794669 . G . PASS END=32794670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 32794671 . T . PASS END=32794671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:33,0 chr1 32794672 . A . PASS END=32794761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:38:0,98,1324:0,98,255:40,0 chr1 32796179 . G . PASS END=32796287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:39:0,88,1366:0,88,255:40,0 chr1 32796369 . G . PASS END=32796505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1215:0,90,255:40,0 chr1 32796506 . A . PASS END=32796509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:24,0 chr1 32797075 . A . PASS END=32797183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,155,255:40,0 chr1 32797277 . A . PASS END=32797407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:39:0,98,1485:0,98,255:40,0 chr1 32797691 . T . PASS END=32797699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:29,0 chr1 32797700 . C . PASS END=32797700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 32797701 . T . PASS END=32797719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,914:0,87,255:29,0 chr1 32797720 . G . PASS END=32797720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 32797721 . A . PASS END=32797726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 32797727 . A . PASS END=32797727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 32797728 . G . PASS END=32797843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:30:0,89,1020:0,89,255:40,0 chr1 32798302 . A . PASS END=32798350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,138,255:40,0 chr1 32798618 . G . PASS END=32798645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,105,1559:0,113,255:40,0 chr1 32800198 . C . PASS END=32800223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 32800224 . G . PASS END=32800241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 32800242 . G . PASS END=32800242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 32800243 . C . PASS END=32800245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32800246 . C . LowGQ END=32800246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:8,0 chr1 32800247 . G . PASS END=32800261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 32800262 . T . PASS END=32800294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 32800295 . G . PASS END=32800297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 32800298 . G . PASS END=32800392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 32800393 . G . PASS END=32800393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 32800394 . A . PASS END=32800417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 32800418 . T . PASS END=32800420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 32800421 . G . PASS END=32800435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 32800436 . G . PASS END=32800436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 32800437 . A . PASS END=32800439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32800440 . A . PASS END=32800467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:16,0 chr1 32800468 . C . PASS END=32800468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 32800469 . T . PASS END=32800469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,504:0,17,255:14,0 chr1 32800470 . T . PASS END=32800485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 32800486 . C . PASS END=32800486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 32800487 . A . PASS END=32800498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,446:0,45,255:15,0 chr1 32800499 . T . PASS END=32800499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 32800500 . T . PASS END=32800511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:12,0 chr1 32800512 . A . LowGQ END=32800512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr1 32800513 . T . PASS END=32800541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:13,0 chr1 32800542 . G . PASS END=32800542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 32800543 . G . PASS END=32800545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 32800546 . G . PASS END=32800551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 32800552 . C . PASS END=32800552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 32800553 . C . PASS END=32800555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 32800556 . T . PASS END=32800556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:12,0 chr1 32800557 . T . PASS END=32800557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 32800558 . G . PASS END=32800565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 32800566 . C . PASS END=32800569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 32800570 . C . PASS END=32800575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr1 32800576 . A . PASS END=32800578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 32800579 . G . PASS END=32800580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 32800581 . G . PASS END=32800583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32800584 . C . PASS END=32800642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 32800643 . G . PASS END=32800645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 32800646 . T . PASS END=32800669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 32800670 . T . PASS END=32800670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 32800671 . C . PASS END=32800677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:12,0 chr1 32800678 . G . PASS END=32800678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 32800679 . C . PASS END=32800684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:16,0 chr1 32800685 . A . PASS END=32800685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:15,0 chr1 32800686 . C . PASS END=32800694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 32800695 . T . PASS END=32800695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,413:0,15,255:12,0 chr1 32800696 . C . PASS END=32800698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 32801548 . C . PASS END=32801548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 32801549 . T . PASS END=32801549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 32801550 . G . PASS END=32801600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,773:0,61,255:26,0 chr1 32801601 . C . PASS END=32801601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 32801602 . G . PASS END=32801613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,856:0,61,255:25,0 chr1 32801614 . C . PASS END=32801614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 32801615 . T . PASS END=32801616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 32801617 . G . PASS END=32801630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 32801631 . C . PASS END=32801631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 32801632 . C . PASS END=32801634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr1 32827034 . T . PASS END=32827034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 32827035 . C . PASS END=32827038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 32827039 . T . PASS END=32827050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 32827051 . G . PASS END=32827053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 32827054 . G . PASS END=32827074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,629:0,41,255:19,0 chr1 32827075 . A . PASS END=32827079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:22,0 chr1 32827080 . T . PASS END=32827080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 32827081 . C . PASS END=32827103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,784:0,66,255:23,0 chr1 32827104 . A . PASS END=32827104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 32827105 . G . PASS END=32827109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 32827110 . T . PASS END=32827112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32827113 . C . PASS END=32827116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 32827117 . C . PASS END=32827117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 32827118 . A . PASS END=32827124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 32827125 . C . PASS END=32827125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 32827126 . G . PASS END=32827126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32827127 . A . PASS END=32827127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 32827128 . C . PASS END=32827136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 32827137 . C . PASS END=32827143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 32827144 . A . PASS END=32827146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32827147 . T . PASS END=32827160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,676:0,43,255:19,0 chr1 32827331 . C . PASS END=32827332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,706:0,57,255:19,0 chr1 32827333 . G . PASS END=32827336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 32827337 . G . PASS END=32827337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 32827338 . G . PASS END=32827339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 32827340 . T . PASS END=32827340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 32827341 . T . PASS END=32827353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,767:0,63,255:22,0 chr1 32827354 . T . PASS END=32827354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:21,0 chr1 32827355 . A . PASS END=32827396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,823:0,66,255:26,0 chr1 32827397 . C . PASS END=32827402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32827403 . G . PASS END=32827404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 32827405 . G . PASS END=32827415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 32827416 . C . PASS END=32827417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32827418 . A . PASS END=32827418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32827419 . T . PASS END=32827431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 32827432 . A . PASS END=32827432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32827433 . C . PASS END=32827477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 32827559 . C . PASS END=32827570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 32827571 . G . PASS END=32827571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32827572 . A . PASS END=32827596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:21,0 chr1 32827597 . T . PASS END=32827606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32827607 . C . PASS END=32827607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32827608 . T . PASS END=32827612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr1 32827613 . G . PASS END=32827613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 32827614 . C . PASS END=32827624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:18,0 chr1 32827625 . T . PASS END=32827638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:11:0,30,450:0,33,255:12,0 chr1 32827639 . A . PASS END=32827654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:8,0 chr1 32827655 . G . PASS END=32827665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 32827666 . G . PASS END=32827666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 32827667 . G . PASS END=32827678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr1 32827679 . G . PASS END=32827679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 32827680 . A . PASS END=32827683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 32827684 . G . PASS END=32827684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 32827685 . G . PASS END=32827687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 32827688 . A . PASS END=32827688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 32827689 . G . PASS END=32827691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 32827692 . T . LowGQ END=32827692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:5,0 chr1 32828303 . A . PASS END=32828303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr1 32828304 . T . PASS END=32828304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:32,0 chr1 32828305 . G . PASS END=32828379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:33:0,80,1213:0,80,255:40,0 chr1 32828380 . A . PASS END=32828380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1498:0,77,255:40,0 chr1 32828381 . G . PASS END=32828427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:41:0,90,1394:0,90,255:40,0 chr1 32828428 . C . PASS END=32828428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:30,0 chr1 32828429 . A . PASS END=32828431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1242:0,91,255:31,0 chr1 32828432 . A . PASS END=32828432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1172:0,53,255:27,0 chr1 32828433 . T . PASS END=32828435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,92,255:28,0 chr1 32828436 . G . PASS END=32828447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,1080:0,60,255:27,0 chr1 32829196 . A . PASS END=32829218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:19,0 chr1 32829219 . C . PASS END=32829231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 32829232 . T . PASS END=32829234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 32829235 . T . PASS END=32829237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32829238 . G . PASS END=32829240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:56:22:0,56,855:0,56,255:21,0 chr1 32829241 . C . PASS END=32829244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 32829245 . G . PASS END=32829245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 32829246 . G . PASS END=32829262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,909:0,72,255:26,0 chr1 32829263 . C . PASS END=32829263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32829264 . C . PASS END=32829275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:23,0 chr1 32829276 . A . PASS END=32829284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,845:0,56,255:19,0 chr1 32829285 . T . PASS END=32829285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,759:0,22,255:18,0 chr1 32829286 . C . PASS END=32829292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32829293 . C . PASS END=32829309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,786:0,63,255:23,0 chr1 32829310 . T . PASS END=32829310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 32829311 . G . PASS END=32829335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,902:0,72,255:25,0 chr1 32829336 . G . PASS END=32829336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32829337 . T . PASS END=32829337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32829338 . C . PASS END=32829339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32829340 . T . PASS END=32829342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32829343 . A . PASS END=32829345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 32829346 . G . PASS END=32829352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 32829353 . G . PASS END=32829355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 32829356 . T . PASS END=32829447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:26,0 chr1 32829448 . G . PASS END=32829448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 32829449 . G . PASS END=32829456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 32829457 . A . PASS END=32829458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:22,0 chr1 32829459 . T . PASS END=32829479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,845:0,69,255:23,0 chr1 32829480 . G . PASS END=32829480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 32829481 . G . PASS END=32829488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,68,255:26,0 chr1 32829489 . C . PASS END=32829530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1049:0,84,255:31,0 chr1 32829531 . T . PASS END=32829531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 32829532 . C . PASS END=32829532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32829533 . A . PASS END=32829536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 32829537 . C . PASS END=32829541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32829542 . G . PASS END=32829544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 32829545 . G . PASS END=32829548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32829549 . C . PASS END=32829555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 32829556 . T . PASS END=32829556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 32829557 . C . PASS END=32829557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32829558 . T . PASS END=32829558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 32829559 . G . PASS END=32829566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 32829567 . A . PASS END=32829589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 32829590 . G . PASS END=32829626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,993:0,84,255:29,0 chr1 32829627 . G . PASS END=32829725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:26,0 chr1 32829726 . G . PASS END=32829738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 32829739 . C . PASS END=32829740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 32829741 . C . PASS END=32829741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32829742 . A . PASS END=32829760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,626:0,60,255:21,0 chr1 32829761 . T . PASS END=32829841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 32829842 . G . PASS END=32829846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 32829847 . C . PASS END=32829857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 32832223 . T . PASS END=32832224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32832225 . A . PASS END=32832225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 32832226 . C . PASS END=32832255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,807:0,66,255:22,0 chr1 32833934 . T . PASS END=32833941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,553:0,48,255:19,0 chr1 32833942 . G . PASS END=32833946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 32833947 . G . PASS END=32833947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 32833948 . A . PASS END=32833949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 32833950 . C . PASS END=32833950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 32833951 . A . PASS END=32833958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:26,0 chr1 32833959 . T . PASS END=32833965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 32833966 . G . PASS END=32833966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 32833967 . G . PASS END=32834013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1094:0,82,255:38,0 chr1 32834014 . G . PASS END=32834014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr1 32834015 . C . PASS END=32834015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 32834016 . T . PASS END=32834017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 32834018 . G . PASS END=32834093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:36:0,85,1272:0,85,255:40,0 chr1 32834094 . T . PASS END=32834107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:67:27:0,67,931:0,67,255:27,0 chr1 32834108 . G . PASS END=32834112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,968:0,81,255:27,0 chr1 32834113 . A . PASS END=32834151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:26,0 chr1 32834831 . C . PASS END=32834939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:38:0,97,1580:0,97,255:40,0 chr1 32841863 . C . PASS END=32841863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 32841864 . T . PASS END=32841864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr1 32841865 . T . PASS END=32841866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 32841867 . C . PASS END=32841867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 32841868 . T . PASS END=32841884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,630:0,41,255:21,0 chr1 32841885 . T . PASS END=32841885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 32841886 . G . PASS END=32841887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 32841888 . A . PASS END=32841888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 32841889 . G . PASS END=32841889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 32841890 . A . PASS END=32841890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 32841891 . C . PASS END=32841891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 32841892 . T . PASS END=32841894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 32841895 . C . PASS END=32841895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 32841896 . C . PASS END=32841909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:25,0 chr1 32841910 . A . PASS END=32841910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 32841911 . G . PASS END=32841911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 32841912 . C . PASS END=32841912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 32841913 . T . PASS END=32841917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,745:0,72,255:25,0 chr1 32841918 . C . PASS END=32841918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 32841919 . A . PASS END=32841920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 32841921 . C . PASS END=32841921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr1 32841922 . C . PASS END=32841922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 32841923 . G . PASS END=32841923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 32841924 . T . PASS END=32841930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 32841931 . G . PASS END=32841931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:23,0 chr1 32841932 . T . PASS END=32841932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 32841933 . G . PASS END=32841933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:23,0 chr1 32841934 . G . PASS END=32841935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr1 32841936 . C . PASS END=32841936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 32841937 . G . PASS END=32841958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,970:0,72,255:26,0 chr1 32841959 . C . PASS END=32841967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 32841968 . G . PASS END=32841968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 32841969 . A . PASS END=32841971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 32841972 . C . PASS END=32841976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 32841977 . G . PASS END=32841985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 32841986 . C . PASS END=32841992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 32841993 . G . PASS END=32841993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr1 32841994 . T . PASS END=32842000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 32842001 . C . PASS END=32842007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 32842008 . T . PASS END=32842015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:24,0 chr1 32842016 . T . PASS END=32842026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:47:24:0,47,810:0,47,255:19,0 chr1 32842027 . G . PASS END=32842059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr1 32842060 . G . PASS END=32842070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 32842071 . T . PASS END=32842071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 32842072 . T . PASS END=32842091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1037:0,84,255:28,0 chr1 32842092 . C . PASS END=32842101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr1 32842102 . G . PASS END=32842102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:23,0 chr1 32842103 . A . PASS END=32842112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr1 32842113 . G . PASS END=32842115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 32842116 . T . PASS END=32842139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 32842140 . G . PASS END=32842142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32842143 . C . PASS END=32842148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 32842149 . G . PASS END=32842150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 32842151 . C . PASS END=32842151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 32842152 . G . PASS END=32842152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32842153 . A . PASS END=32842159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 32842160 . T . PASS END=32842170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 32842171 . A . PASS END=32842197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1022:0,68,255:26,0 chr1 32842198 . A . PASS END=32842211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 32842212 . C . PASS END=32842212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1069:0,38,255:28,0 chr1 32842213 . T . PASS END=32842233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 32842234 . T . PASS END=32842234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 32842235 . C . PASS END=32842244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 32842245 . G . PASS END=32842258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr1 32842259 . G . PASS END=32842261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr1 32842262 . C . PASS END=32842262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 32842263 . T . PASS END=32842278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr1 32842279 . G . PASS END=32842315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,68,255:26,0 chr1 32842316 . A . PASS END=32842316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 32842317 . T . PASS END=32842324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32842325 . A . PASS END=32842337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 32842338 . C . PASS END=32842339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:18:0,33,495:0,54,255:11,0 chr1 32842340 . C . PASS END=32842342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:18:0,24,360:0,54,255:8,0 chr1 32843571 . C . PASS END=32843571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 32843572 . T . PASS END=32843573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 32843574 . C . PASS END=32843578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 32843579 . T . PASS END=32843579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 32843580 . C . PASS END=32843581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 32843582 . T . PASS END=32843585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 32843586 . A . PASS END=32843587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32843588 . C . PASS END=32843591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32843592 . G . PASS END=32843592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 32843593 . C . PASS END=32843595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 32843596 . T . PASS END=32843601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32843602 . G . PASS END=32843602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32843603 . A . PASS END=32843649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:19,0 chr1 32843816 . C . PASS END=32843884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,120,1800:0,126,255:40,0 chr1 32844325 . C . PASS END=32844340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:19,0 chr1 32844341 . G . PASS END=32844368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:26,0 chr1 32844369 . G . PASS END=32844391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 32844392 . T . PASS END=32844392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:25,0 chr1 32844393 . C . PASS END=32844394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 32844395 . T . PASS END=32844440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,854:0,61,255:26,0 chr1 32846815 . C . PASS END=32846869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,102,1467:0,102,255:40,0 chr1 32849431 . C . PASS END=32849481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1064:0,87,255:32,0 chr1 32849482 . G . PASS END=32849523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 32849524 . G . PASS END=32849524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 32849525 . G . PASS END=32849538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1039:0,71,255:26,0 chr1 32849539 . C . PASS END=32849541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32849542 . T . PASS END=32849542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 32849543 . A . PASS END=32849543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 32849544 . G . PASS END=32849559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 32849560 . T . PASS END=32849560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 32849561 . T . PASS END=32849561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 32849562 . T . PASS END=32849562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 32849563 . C . PASS END=32849563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 32849564 . T . PASS END=32849564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 32849565 . T . PASS END=32849583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,868:0,69,255:26,0 chr1 32849584 . T . PASS END=32849595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 32849596 . C . PASS END=32849629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 32849630 . C . PASS END=32849638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 32849639 . C . PASS END=32849666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,68,255:26,0 chr1 32849667 . A . PASS END=32849667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,821:0,45,255:18,0 chr1 32849668 . A . PASS END=32849671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 32849672 . T . PASS END=32849674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 32849675 . G . PASS END=32849675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 32849676 . G . PASS END=32849678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 32849679 . A . PASS END=32849684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:21,0 chr1 32849685 . T . PASS END=32849685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 32849686 . A . PASS END=32849706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 32849707 . G . PASS END=32849707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 32849708 . A . PASS END=32849712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 32849713 . C . PASS END=32849740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:16:0,43,637:0,43,255:18,0 chr1 32849741 . T . PASS END=32849757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,466:0,39,255:13,0 chr1 32849758 . G . PASS END=32849770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 32849771 . A . PASS END=32849772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32849773 . C . PASS END=32849780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 32849781 . T . PASS END=32849786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 32849787 . T . PASS END=32849787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 32849788 . G . PASS END=32849794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 32849795 . A . PASS END=32849795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:10,0 chr1 32849796 . G . PASS END=32849798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 32849799 . C . PASS END=32849802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 32852380 . A . PASS END=32852384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 32852385 . G . PASS END=32852385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:28,0 chr1 32852386 . C . PASS END=32852387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 32852388 . T . PASS END=32852388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:28,0 chr1 32852389 . C . PASS END=32852389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 32852390 . T . PASS END=32852390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 32852391 . C . PASS END=32852405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1011:0,87,255:33,0 chr1 32852406 . C . PASS END=32852406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:32,0 chr1 32852407 . C . PASS END=32852496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:34:0,89,1234:0,89,255:40,0 chr1 32859681 . C . PASS END=32859741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1019:0,84,255:36,0 chr1 32860005 . C . PASS END=32860015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1261:0,91,255:37,0 chr1 32936226 . A . PASS END=32936226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 32936227 . T . PASS END=32936227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 32936228 . G . PASS END=32936228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 32936229 . G . PASS END=32936229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 32936230 . A . PASS END=32936230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 32936231 . G . PASS END=32936231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 32936232 . A . PASS END=32936233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 32936234 . G . PASS END=32936239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:18,0 chr1 32936240 . C . PASS END=32936252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:25,0 chr1 32936253 . C . PASS END=32936278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:32,0 chr1 32936279 . A . PASS END=32936279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,991:0,57,255:31,0 chr1 32936280 . A . PASS END=32936299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1090:0,82,255:32,0 chr1 32936300 . C . PASS END=32936300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 32936301 . T . PASS END=32936305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 32936306 . C . PASS END=32936306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 32936307 . A . PASS END=32936309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1140:0,93,255:32,0 chr1 32936310 . A . PASS END=32936310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr1 32936311 . T . PASS END=32936339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1119:0,83,255:33,0 chr1 32936340 . A . PASS END=32936340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 32936341 . G . PASS END=32936361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1125:0,87,255:30,0 chr1 32936362 . G . PASS END=32936368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 32936369 . C . PASS END=32936369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:22,0 chr1 32936370 . T . PASS END=32936389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 32936390 . C . PASS END=32936390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 32936391 . T . PASS END=32936392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 32936393 . T . PASS END=32936393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 32936394 . A . PASS END=32936405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:26:0,75,978:0,78,255:26,0 chr1 32936406 . G . PASS END=32936407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 32936408 . G . PASS END=32936424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,71,255:26,0 chr1 32936425 . C . PASS END=32936460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1143:0,85,255:35,0 chr1 32936461 . T . PASS END=32936461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1194:0,47,255:30,0 chr1 32936462 . C . PASS END=32936546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1299:0,84,255:40,2 chr1 32936547 . A . PASS END=32936547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 32936548 . A . PASS END=32936572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1178:0,80,255:32,0 chr1 32936573 . A . PASS END=32936574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:24,0 chr1 32936575 . A . PASS END=32936575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:22,0 chr1 32936576 . C . PASS END=32936579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:24,0 chr1 32936580 . A . PASS END=32936580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr1 32936581 . G . PASS END=32936582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:20,0 chr1 32936583 . T . PASS END=32936586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:26:0,45,855:0,45,255:19,0 chr1 32936587 . C . PASS END=32936589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:20,0 chr1 32936590 . T . PASS END=32936590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 32936591 . C . PASS END=32936591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 32936592 . G . PASS END=32936592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 32936593 . A . PASS END=32936607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:23,0 chr1 32936608 . T . PASS END=32936608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 32936609 . G . PASS END=32936621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 32936622 . G . PASS END=32936625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 32936626 . T . PASS END=32936667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,886:0,61,255:25,0 chr1 32936668 . C . PASS END=32936668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 32936669 . G . PASS END=32936671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 32936672 . A . PASS END=32936672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 32936673 . G . PASS END=32936673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 32936674 . C . PASS END=32936675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:22,0 chr1 32936676 . G . PASS END=32936679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,845:0,69,255:23,0 chr1 32936680 . C . PASS END=32936680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 32936681 . G . PASS END=32936684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32936685 . C . PASS END=32936686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 32936687 . T . PASS END=32936688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32936689 . A . PASS END=32936689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 32936690 . G . PASS END=32936692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,709:0,63,255:21,0 chr1 32936693 . T . PASS END=32936693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 32936694 . G . PASS END=32936696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32936697 . A . PASS END=32936697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 32936698 . G . PASS END=32936707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 32936708 . C . PASS END=32936709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 32936710 . G . PASS END=32936713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 32936714 . A . PASS END=32936714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 32936715 . G . PASS END=32936723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,778:0,63,255:22,0 chr1 32936724 . G . PASS END=32936724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 32936725 . G . PASS END=32936725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32936726 . G . PASS END=32936726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 32936727 . A . PASS END=32936727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:20,0 chr1 32936728 . C . PASS END=32936730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 32936731 . C . PASS END=32936731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 32936732 . C . PASS END=32936734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 32936735 . T . PASS END=32936735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 32936736 . G . PASS END=32936737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 32936738 . T . PASS END=32936738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 32936739 . A . PASS END=32936739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 32936740 . C . PASS END=32936741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 32936742 . A . PASS END=32936742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 32936743 . A . PASS END=32936753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 32936754 . T . PASS END=32936756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 32936757 . T . PASS END=32936757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,779:0,36,255:18,0 chr1 32936758 . C . PASS END=32936758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 32936759 . T . PASS END=32936759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:18,0 chr1 32936760 . C . PASS END=32936760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 32936761 . C . PASS END=32936761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:16,0 chr1 32936762 . A . PASS END=32936779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:41:19:0,41,659:0,41,255:19,0 chr1 32936780 . C . PASS END=32936782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 32936783 . G . PASS END=32936787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:18,0 chr1 32936788 . G . PASS END=32936798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:20,0 chr1 32936799 . T . PASS END=32936808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 32936809 . G . PASS END=32936809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 32936810 . T . PASS END=32936810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 32936811 . G . PASS END=32936820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 32936821 . A . PASS END=32936821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 32936822 . C . PASS END=32936837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,768:0,63,255:23,0 chr1 32936838 . C . PASS END=32936838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 32936839 . T . PASS END=32936840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 32936841 . G . PASS END=32936841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 32936842 . T . PASS END=32936851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 32936852 . C . PASS END=32936852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 32936853 . A . PASS END=32936856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:23,0 chr1 32936857 . T . PASS END=32936858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,819:0,42,255:22,0 chr1 32936859 . G . PASS END=32936860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 32936861 . C . PASS END=32936861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 32936862 . G . PASS END=32936874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 32936875 . A . PASS END=32936875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 32936876 . C . PASS END=32936883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 32936884 . T . PASS END=32936884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:24,0 chr1 32936885 . C . PASS END=32936897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,895:0,78,255:26,0 chr1 32936898 . A . PASS END=32936898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 32936899 . A . PASS END=32936913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,795:0,61,255:24,0 chr1 32936914 . A . PASS END=32936914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 32936915 . G . PASS END=32936925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 32936926 . A . PASS END=32936926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 32936927 . T . PASS END=32936927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 32936928 . G . PASS END=32936928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 32936929 . C . PASS END=32936943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:23,0 chr1 32936944 . T . PASS END=32936944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 32936945 . G . PASS END=32936961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,839:0,66,255:23,0 chr1 32936962 . T . PASS END=32936962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 32936963 . G . PASS END=32936964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 32936965 . A . PASS END=32936980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 32936981 . G . PASS END=32936982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 32936983 . T . PASS END=32936984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 32936985 . A . PASS END=32936992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 32936993 . C . PASS END=32937005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,698:0,44,255:19,0 chr1 32937006 . G . PASS END=32937008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32937009 . T . PASS END=32937010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr1 32937011 . G . PASS END=32937016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 32937017 . C . PASS END=32937017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:21,0 chr1 32937018 . G . PASS END=32937054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:23,0 chr1 32937055 . T . PASS END=32937055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 32937056 . G . PASS END=32937056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32937057 . A . PASS END=32937057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 32937058 . A . PASS END=32937060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 32937061 . A . PASS END=32937061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 32937062 . G . PASS END=32937075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 32937076 . T . PASS END=32937076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 32937077 . C . PASS END=32937094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,854:0,72,255:24,0 chr1 32937095 . C . PASS END=32937095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 32937096 . C . PASS END=32937102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 32937103 . A . PASS END=32937103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:23,0 chr1 32937104 . G . PASS END=32937108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:25,0 chr1 32937109 . A . PASS END=32937109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 32937110 . T . PASS END=32937110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 32937111 . G . PASS END=32937115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 32937116 . C . PASS END=32937162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:26:0,60,763:0,62,255:26,0 chr1 32937163 . T . PASS END=32937163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 32937164 . A . PASS END=32937188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 32937189 . C . PASS END=32937189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 32937190 . A . PASS END=32937196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 32937197 . C . PASS END=32937216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:17,0 chr1 32946492 . G . PASS END=32946496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 32946497 . G . PASS END=32946509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 32946510 . C . PASS END=32946511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 32946512 . A . PASS END=32946514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 32946515 . A . PASS END=32946516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 32946517 . G . PASS END=32946662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1158:0,96,255:40,0 chr1 32946663 . C . PASS END=32946664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 32946665 . C . PASS END=32946670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:30:0,51,765:0,90,255:17,0 chr1 32950702 . G . PASS END=32950703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 32950704 . C . PASS END=32950716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1026:0,84,255:30,0 chr1 32950717 . C . PASS END=32950717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 32950718 . G . PASS END=32950831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1127:0,80,255:40,0 chr1 32950832 . A . PASS END=32950832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:35,0 chr1 32950833 . T . PASS END=32950875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1352:0,84,255:39,0 chr1 32950876 . T . PASS END=32950876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr1 32950877 . C . PASS END=32950882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 32950883 . G . PASS END=32950883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr1 32950884 . C . PASS END=32950987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1327:0,90,255:40,0 chr1 32950988 . C . PASS END=32950988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:33,0 chr1 32950989 . T . PASS END=32951019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1305:0,87,255:39,0 chr1 33058533 . A . PASS END=33058550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:23,0 chr1 33058551 . C . PASS END=33058551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 33058552 . A . PASS END=33058554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,923:0,64,255:26,0 chr1 33058555 . C . PASS END=33058557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 33058558 . A . PASS END=33058558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 33058559 . C . PASS END=33058559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 33058560 . C . PASS END=33058562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 33058563 . C . PASS END=33058566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 33058567 . A . PASS END=33058567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 33058568 . G . PASS END=33058575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 33058576 . A . PASS END=33058576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 33058577 . C . PASS END=33058608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1079:0,83,255:34,0 chr1 33058609 . G . PASS END=33058609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:33,0 chr1 33058610 . C . PASS END=33059173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1219:0,81,255:40,0 chr1 33059174 . A . PASS END=33059174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:43:55:0,43,1492:0,43,255:40,0 chr1 33059175 . T . PASS END=33059232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:85:49:0,85,1476:0,85,255:40,0 chr1 33059233 . C . PASS END=33059233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:61:48:0,61,1322:0,61,255:38,0 chr1 33059234 . T . PASS END=33059234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 33059235 . G . PASS END=33059235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1431:0,77,255:39,0 chr1 33059236 . A . PASS END=33059238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:97:48:0,97,1599:0,97,255:40,0 chr1 33059239 . C . PASS END=33059239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:54:45:0,54,1289:0,54,255:40,0 chr1 33059240 . T . PASS END=33059247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,101,1379:0,101,255:40,0 chr1 33059248 . A . PASS END=33059248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:16:46:0,16,1175:0,16,255:37,0 chr1 33059249 . T . PASS END=33059256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:46:0,91,1389:0,91,255:40,0 chr1 33059257 . A . PASS END=33059257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,7:49:31:49:0,31,1272:0,31,255:36,0 chr1 33059258 . G . PASS END=33059259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:95:48:0,95,1640:0,95,255:40,0 chr1 33059260 . C . PASS END=33059260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:67:50:0,67,1375:0,67,255:40,0 chr1 33059261 . T . PASS END=33059261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr1 33059262 . G . PASS END=33059262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:66:50:0,66,1223:0,66,255:40,0 chr1 33059263 . A . PASS END=33059264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,116,1603:0,116,255:40,0 chr1 33059265 . G . PASS END=33059265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,7:50:33:50:0,33,1133:0,33,255:38,0 chr1 33059266 . A . PASS END=33059276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:86:47:0,86,1336:0,86,255:40,0 chr1 33059277 . A . PASS END=33059277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:24:50:0,24,1221:0,24,255:38,0 chr1 33059278 . T . PASS END=33059280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:48:0,109,1257:0,109,255:40,0 chr1 33059281 . A . PASS END=33059281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,7:48:27:48:0,27,1159:0,27,255:36,0 chr1 33059282 . T . PASS END=33059345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1016:0,89,255:40,0 chr1 33059346 . A . PASS END=33059348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1123:0,77,255:26,0 chr1 33059349 . T . PASS END=33059349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:25,0 chr1 33059350 . T . PASS END=33059353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33059354 . A . PASS END=33059354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr1 33059355 . G . PASS END=33059355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:25,0 chr1 33060655 . A . PASS END=33060661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 33060662 . G . PASS END=33060662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 33060663 . C . PASS END=33060663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 33060664 . C . PASS END=33060665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 33060666 . C . PASS END=33060666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 33060667 . G . PASS END=33060679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,801:0,69,255:24,0 chr1 33060680 . G . PASS END=33060808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:27:0,81,1016:0,81,255:40,0 chr1 33060809 . T . PASS END=33060810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1070:0,74,255:26,0 chr1 33060811 . G . PASS END=33060811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:24,0 chr1 33060812 . C . PASS END=33060822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:26,0 chr1 33060823 . C . PASS END=33060824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:26:0,51,765:0,78,255:17,0 chr1 33065688 . A . PASS END=33065695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,93,255:32,0 chr1 33065696 . G . PASS END=33065696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:33,0 chr1 33065697 . G . PASS END=33065704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1239:0,89,255:34,0 chr1 33065705 . A . PASS END=33065705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,939:0,71,255:32,0 chr1 33065706 . C . PASS END=33065774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1192:0,86,255:40,0 chr1 33065775 . C . PASS END=33065775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:35,0 chr1 33065776 . G . PASS END=33065909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:35:0,92,1296:0,92,255:40,0 chr1 33065910 . A . PASS END=33065946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,105,1496:0,110,255:40,0 chr1 33065947 . G C, 186.14 PASS DP=47;MQ=249.31;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,25,0:0,22,0:136:224,139,0,1658,139,1658:255,141,0:0,0:1.8614e+02,1.3614e+02,0.0000e+00,4.5000e+02,1.7091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,24:0,0,31,16 chr1 33065948 . T . PASS END=33065984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:37:0,100,1352:0,100,255:40,0 chr1 33065985 . G . PASS END=33066018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,97,255:38,0 chr1 33066019 . A . PASS END=33066020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr1 33087463 . T . PASS END=33087517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:48:0,80,1544:0,80,255:40,0 chr1 33087518 . G . PASS END=33087529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:60:0,101,1800:0,101,255:40,0 chr1 33087530 . A . PASS END=33087530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:69:60:0,69,1931:0,69,255:39,0 chr1 33087531 . T . PASS END=33087546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:81:51:0,81,1485:0,81,255:40,0 chr1 33087547 . T . PASS END=33087547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1751:0,73,255:31,0 chr1 33087548 . C . PASS END=33087549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:92:49:0,92,1485:0,92,255:32,0 chr1 33093109 . C . PASS END=33093145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,181,255:40,0 chr1 33093378 . C . PASS END=33093403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,574:0,48,255:17,0 chr1 33093404 . A . PASS END=33093404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 33093405 . A . PASS END=33093405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 33093406 . A . PASS END=33093406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 33093407 . G . PASS END=33093448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,476:0,45,255:17,0 chr1 33093449 . A . PASS END=33093466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr1 33097428 . C . PASS END=33097480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:65:0,120,1800:0,195,255:40,0 chr1 33098911 . C . PASS END=33098955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,136,255:40,0 chr1 33099246 . C . PASS END=33099250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 33099251 . G . PASS END=33099251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 33099252 . T . PASS END=33099259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1070:0,90,255:30,0 chr1 33099260 . A . PASS END=33099260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 33099261 . T . PASS END=33099265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 33099266 . C . PASS END=33099266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 33099267 . A . PASS END=33099294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:32,0 chr1 33099295 . A . PASS END=33099296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 33099297 . A . PASS END=33099302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 33099303 . A . PASS END=33099323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:26,0 chr1 33099324 . A . PASS END=33099328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,59,255:19,0 chr1 33099552 . C . PASS END=33099711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:44:0,115,1529:0,115,255:40,0 chr1 33100303 . C . PASS END=33100316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,161,255:40,0 chr1 33100369 . T . PASS END=33100393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,149,255:40,0 chr1 33116003 . A . PASS END=33116004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 33116030 . T . PASS END=33116166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:96:43:0,96,1504:0,96,255:40,0 chr1 33116908 . A . PASS END=33116923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:37:0,94,1288:0,94,255:36,0 chr1 33117515 . C . PASS END=33117662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:37:0,105,1575:0,111,255:40,0 chr1 33123028 . A . PASS END=33123151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:39:0,81,1215:0,109,255:40,0 chr1 33123152 . C . PASS END=33123156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:39:0,78,1170:0,117,255:26,0 chr1 33123157 . C . PASS END=33123157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 33123158 . G . PASS END=33123172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:25,0 chr1 33123173 . G . PASS END=33123173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 33127847 . G . PASS END=33127851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 33133826 . A . PASS END=33133930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:90:42:0,90,1468:0,90,255:40,0 chr1 33133931 . T . PASS END=33133967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,109,1428:0,109,255:40,0 chr1 33133968 . T C, 172.48 PASS DP=42;MQ=185.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,25,0:0,17,0:122:210,125,0,1562,125,1562:255,126,0:0,0:1.7248e+02,1.2248e+02,0.0000e+00,4.5000e+02,1.5725e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,29:0,0,18,24 chr1 33133969 . T . PASS END=33133999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:34:0,93,1395:0,98,255:39,0 chr1 33134340 . A . PASS END=33134455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:36:0,85,1305:0,85,255:40,0 chr1 33134573 . A . PASS END=33134733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:92:42:0,92,1457:0,92,255:40,0 chr1 33134832 . T . PASS END=33134951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:64:0,120,1800:0,147,255:40,0 chr1 33134952 . T . PASS END=33134958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,141,255:40,0 chr1 33135087 . A . PASS END=33135164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:48:0,112,1743:0,112,255:40,0 chr1 33138051 . G . PASS END=33138051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 33138052 . T . PASS END=33138052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:33,0 chr1 33138053 . T . PASS END=33138053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1296:0,92,255:33,0 chr1 33138054 . C . PASS END=33138054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:32,0 chr1 33138055 . A . PASS END=33138061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1294:0,92,255:37,0 chr1 33138062 . A . PASS END=33138062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:35,0 chr1 33138063 . C . PASS END=33138127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:38:0,92,1300:0,92,255:40,0 chr1 33138243 . T . PASS END=33138300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,120,1800:0,141,255:40,0 chr1 33138392 . T . PASS END=33138478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,85,255:40,0 chr1 33138479 . A . PASS END=33138482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 33138483 . T . PASS END=33138483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:25,0 chr1 33138484 . C . PASS END=33138498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 33138499 . A . PASS END=33138500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:24,0 chr1 33138501 . T . PASS END=33138501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,897:0,53,255:20,0 chr1 33138502 . G . PASS END=33138502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 33145236 . G . PASS END=33145415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:93:38:0,93,1372:0,98,255:40,0 chr1 33146127 . G . PASS END=33146147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:70:0,100,1800:0,100,255:40,0 chr1 33147389 . T . PASS END=33147461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,138,255:40,0 chr1 33149576 . A . PASS END=33149582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 33149583 . A . PASS END=33149583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,944:0,76,255:29,0 chr1 33149584 . C . PASS END=33149589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1123:0,90,255:31,0 chr1 33149590 . T . PASS END=33149590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 33149591 . C . PASS END=33149592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 33149593 . T . PASS END=33149593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:30,0 chr1 33149594 . C . PASS END=33149690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1138:0,80,255:40,0 chr1 33149859 . T . PASS END=33149983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:39:0,117,1504:0,117,255:40,0 chr1 33160466 . C . PASS END=33160566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1172:0,86,255:36,0 chr1 33160567 . G . PASS END=33160576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 33160577 . A . PASS END=33160577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:23,0 chr1 33160578 . G . PASS END=33160578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:24,0 chr1 33160579 . C . LowGQ END=33160579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,778:5,0,255:21,0 chr1 33160580 . C . PASS END=33160584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,61,255:20,0 chr1 33160585 . T . PASS END=33160590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 33160591 . C . PASS END=33160593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 33160594 . G . PASS END=33160595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 33160596 . A . PASS END=33160597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33160598 . C . PASS END=33160606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:20:0,42,630:0,47,255:19,0 chr1 33160607 . G . PASS END=33160618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:16:0,36,540:0,48,255:13,0 chr1 33160619 . A . PASS END=33160640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,513:0,45,255:15,0 chr1 33160641 . C . PASS END=33160645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 33160646 . T . PASS END=33160646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 33160647 . A . PASS END=33160657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 33160658 . G . PASS END=33160664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 33160665 . G . PASS END=33160666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33160667 . C . PASS END=33160673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33160674 . T . PASS END=33160678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 33160679 . C . PASS END=33160680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33160681 . C . PASS END=33160696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,540:0,32,255:13,0 chr1 33160697 . C . PASS END=33160697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 33160698 . T . PASS END=33160698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 33160699 . C . PASS END=33160699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33160700 . T . PASS END=33160718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 33160719 . T . PASS END=33160719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 33160720 . G . PASS END=33160721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 33160722 . G . PASS END=33160722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 33160723 . C . PASS END=33160738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,545:0,48,255:17,0 chr1 33160739 . T . PASS END=33160739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 33160740 . T . PASS END=33160752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,651:0,44,255:19,0 chr1 33160753 . G . PASS END=33160756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33160757 . A . PASS END=33160765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:19,0 chr1 33160766 . G . PASS END=33160767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 33160768 . T . PASS END=33160768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 33160769 . T . PASS END=33160817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:24,0 chr1 33160818 . G . PASS END=33160818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 33160819 . C . PASS END=33160840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,892:0,65,255:24,0 chr1 33160841 . C . PASS END=33160854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:25,0 chr1 33160855 . T . PASS END=33160856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:47:26:0,47,900:0,47,255:24,0 chr1 33160857 . G . PASS END=33160859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:24,0 chr1 33160860 . C . PASS END=33160860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 33160861 . T . PASS END=33160861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 33160862 . T . PASS END=33160862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 33160863 . G . PASS END=33160863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:24,0 chr1 33160864 . T . PASS END=33160873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 33160874 . T . PASS END=33160874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr1 33160875 . T . PASS END=33160875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 33160876 . C . PASS END=33160877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 33160878 . C T, 124.79 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,11,0:0,15,0:75:163,78,0,979,78,979:255,81,0:0,0:1.2479e+02,7.4794e+01,2.5886e-07,4.5000e+02,1.0956e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,7:0,0,12,14 chr1 33160879 . G . PASS END=33160879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 33160880 . G . PASS END=33160887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 33160888 . C . PASS END=33160888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:24,0 chr1 33160889 . A . PASS END=33160890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 33160891 . A . PASS END=33160891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 33160892 . C . PASS END=33160893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 33160894 . G . PASS END=33160894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:25,0 chr1 33160895 . A . PASS END=33160895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 33160896 . G . PASS END=33160898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33160899 . A . PASS END=33160900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 33160901 . G . PASS END=33160901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33160902 . T . PASS END=33160903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 33160904 . C . PASS END=33160904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33160905 . T . PASS END=33160915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,915:0,64,255:26,0 chr1 33160916 . C . PASS END=33160922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:25,0 chr1 33160923 . T . PASS END=33160923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:22,0 chr1 33160924 . G . PASS END=33160946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,945:0,65,255:25,0 chr1 33160947 . T . PASS END=33160947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,797:0,39,255:24,0 chr1 33160948 . T . PASS END=33160955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,842:0,75,255:25,0 chr1 33160956 . T . PASS END=33160956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:24,0 chr1 33160957 . T . PASS END=33160969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 33160970 . C . PASS END=33160970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 33160971 . T . PASS END=33160993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,894:0,62,255:26,0 chr1 33160994 . T . PASS END=33160994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,889:0,53,255:23,0 chr1 33160995 . A . PASS END=33160996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 33160997 . G . PASS END=33161005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 33161006 . C . PASS END=33161007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 33161008 . C . PASS END=33161008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr1 33161009 . C . PASS END=33161014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 33161015 . T . PASS END=33161015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 33161016 . G . PASS END=33161029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr1 33161030 . C . PASS END=33161030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 33161031 . T . PASS END=33161031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 33161032 . T . PASS END=33161032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 33161033 . G . PASS END=33161033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 33161034 . T . PASS END=33161035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 33161036 . G . PASS END=33161037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 33161038 . C . PASS END=33161038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 33161039 . A . PASS END=33161054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr1 33161055 . T . PASS END=33161056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 33161057 . G . PASS END=33161057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 33161058 . A . PASS END=33161058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:23,0 chr1 33161059 . C . PASS END=33161060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 33161061 . T . PASS END=33161061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 33161062 . G . PASS END=33161071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:25,0 chr1 33161072 . C . PASS END=33161073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 33161074 . G . PASS END=33161074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 33161075 . C . PASS END=33161075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33161076 . A . PASS END=33161087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,986:0,68,255:26,0 chr1 33161088 . C . PASS END=33161092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 33161093 . C . PASS END=33161105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,914:0,62,255:26,0 chr1 33161106 . T . PASS END=33161109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 33161110 . T . PASS END=33161110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33161111 . G . PASS END=33161116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 33161117 . A . PASS END=33161117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 33161118 . T . PASS END=33161153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1125:0,87,255:32,0 chr1 33161154 . C . PASS END=33161155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 33161156 . C . PASS END=33161174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1047:0,84,255:28,0 chr1 33161175 . A . PASS END=33161211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1041:0,87,255:38,0 chr1 33161212 . T C, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,23,0:0,14,0:108:196,111,0,1427,111,1427:255,114,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,16:0,0,21,16 chr1 33161213 . G . PASS END=33161249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1395:0,101,255:37,0 chr1 33161250 . T . PASS END=33161275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:36:0,86,1352:0,86,255:37,0 chr1 33161276 . C . PASS END=33161276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:17:39:0,17,1059:0,17,255:30,0 chr1 33161277 . T . PASS END=33161277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 33161278 . C . PASS END=33161278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1127:0,50,255:31,0 chr1 33161279 . T . PASS END=33161333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1305:0,92,255:35,0 chr1 33161334 . T . PASS END=33161334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:30,0 chr1 33161335 . C . PASS END=33161373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1053:0,88,255:38,0 chr1 33161374 . C . PASS END=33161374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:36,0 chr1 33161375 . A . PASS END=33161537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1125:0,82,255:38,0 chr1 33161538 . T . PASS END=33161538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1086:0,47,255:32,0 chr1 33161539 . T . PASS END=33161617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1141:0,80,255:38,0 chr1 33161618 . A . PASS END=33161618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr1 33161619 . G . PASS END=33161631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 33161632 . C . PASS END=33161637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr1 33161638 . T . PASS END=33161638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33161639 . T . PASS END=33161639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 33161640 . G . PASS END=33161643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 33161644 . T . PASS END=33161644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr1 33161645 . C . PASS END=33161645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33168209 . C . LowGQ END=33168210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,102:2,0,118:3,0 chr1 33168211 . C . PASS END=33168212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 33168213 . C . LowGQ END=33168213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 33168214 . G . PASS END=33168214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 33168215 . G . LowGQ END=33168218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,2:4:0:4:0,0,0:2,0,58:3,0 chr1 33168219 . G . PASS END=33168221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 33168222 . C . LowGQ END=33168222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 33168223 . G . PASS END=33168223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 33168224 . G . LowGQ END=33168224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,2:4:0:4:0,0,45:21,0,66:2,0 chr1 33168225 . C . PASS END=33168225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,139:0,12,139:4,0 chr1 33168226 . G . LowGQ END=33168226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr1 33168227 . C . PASS END=33168227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 33168228 . C . LowGQ END=33168230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,45:5,0,66:3,0 chr1 33168231 . C . PASS END=33168234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 33168235 . G . LowGQ END=33168235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 33168236 . C . PASS END=33168258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 33168259 . C . PASS END=33168259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 33168260 . A . PASS END=33168261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 33207556 . A . PASS END=33207613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 33207614 . G . PASS END=33207623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr1 33207624 . C . PASS END=33207624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 33207625 . A . PASS END=33207625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 33207626 . G . LowGQ END=33207627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:0,0,137:4,0 chr1 33207628 . A . PASS END=33207632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr1 33207633 . G . PASS END=33207634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr1 33207635 . C . PASS END=33207635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 33207636 . C . PASS END=33207637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 33207638 . G . LowGQ END=33207638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:5,0 chr1 33207639 . C . PASS END=33207641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 33207642 . C . PASS END=33207642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 33207643 . G . PASS END=33207646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 33207647 . C . PASS END=33207647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 33207648 . G . PASS END=33207648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 33207649 . T . PASS END=33207650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 33207651 . C . PASS END=33207651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 33207652 . G . PASS END=33207652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 33207653 . G . PASS END=33207653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 33207654 . C . PASS END=33207655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 33207656 . T . PASS END=33207656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 33207657 . C . PASS END=33207660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 33207661 . C . PASS END=33207663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 33207664 . G . PASS END=33207664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 33207665 . C . PASS END=33207665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 33207666 . C . PASS END=33207666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 33207667 . T . PASS END=33207667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 33207668 . T . PASS END=33207671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 33207672 . C . PASS END=33207672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 33207673 . T . PASS END=33207675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 33207676 . C . LowGQ END=33207676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,241:17,0,255:8,0 chr1 33207677 . T . PASS END=33207678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 33207679 . C . LowGQ END=33207679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,177:42,0,219:7,0 chr1 33207680 . G . PASS END=33207683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 33207684 . C . LowGQ END=33207684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,210:3,0,214:8,0 chr1 33207685 . A . PASS END=33207685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 33207686 . A . LowGQ END=33207686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,233:3,0,236:8,0 chr1 33207687 . G . PASS END=33207692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 33207693 . C . PASS END=33207693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:9,0 chr1 33207694 . A . PASS END=33207694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 33207695 . A . PASS END=33207695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 33207696 . G . PASS END=33207700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,315:0,33,255:11,0 chr1 33207701 . A . LowGQ END=33207701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:9,0 chr1 33207702 . G . PASS END=33207703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 33207704 . C . LowGQ END=33207704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:9,0 chr1 33207705 . G . PASS END=33207706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 33207707 . C . LowGQ END=33207707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,4:11:0:11:0,0,139:56,0,194:7,0 chr1 33207708 . G . PASS END=33207715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr1 33207716 . A . LowGQ END=33207716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,241:22,0,255:9,0 chr1 33207717 . G . PASS END=33207719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:13,0 chr1 33207720 . C . PASS END=33207720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr1 33207721 . G . PASS END=33207722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,450:0,39,255:13,0 chr1 33207723 . C . PASS END=33207724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,337:0,22,255:12,0 chr1 33207725 . A . PASS END=33207726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 33207727 . C . PASS END=33207727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 33207728 . C . PASS END=33207739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:12,0 chr1 33207740 . G . PASS END=33207740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 33207741 . G . PASS END=33207741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 33207742 . G . PASS END=33207744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 33207745 . A . PASS END=33207745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 33207746 . A . PASS END=33207747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 33207748 . A . PASS END=33207748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,313:0,5,255:11,0 chr1 33207749 . A . PASS END=33207758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 33207759 . C . PASS END=33207759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 33207760 . A . PASS END=33207760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 33207761 . A . PASS END=33207766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 33207767 . A . PASS END=33207767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 33207768 . G . PASS END=33207772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 33207773 . C . PASS END=33207774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 33207775 . A . PASS END=33207776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,303:0,16,255:8,0 chr1 33207777 . G . PASS END=33207779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 33207780 . C . PASS END=33207780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 33207781 . A . PASS END=33207783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 33207784 . G . PASS END=33207785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 33207786 . C . PASS END=33207790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 33219691 . A . PASS END=33219709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 33219710 . A . PASS END=33219710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 33219711 . G . PASS END=33219723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:18,0 chr1 33219724 . A . PASS END=33219724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 33219725 . G . PASS END=33219732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 33219733 . C . PASS END=33219733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 33219734 . G . PASS END=33219741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 33219742 . A . PASS END=33219742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 33219743 . G . PASS END=33219743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 33219744 . C . PASS END=33219744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 33219745 . T . PASS END=33219750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,523:0,48,255:16,0 chr1 33219751 . C . PASS END=33219751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:13,0 chr1 33219752 . G . PASS END=33219753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33219754 . T . PASS END=33219761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33219762 . G . PASS END=33219762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33219763 . T . PASS END=33219763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33219764 . C . PASS END=33219769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 33219770 . A . PASS END=33219770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 33219771 . G . PASS END=33219771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 33219772 . C . PASS END=33219772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,476:0,17,255:14,0 chr1 33219773 . G . PASS END=33219775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,513:0,45,255:15,0 chr1 33219776 . C . PASS END=33219776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 33219777 . G . PASS END=33219779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 33219780 . A . PASS END=33219780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 33219781 . G . PASS END=33219781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33231371 . A . PASS END=33231374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33231375 . T . PASS END=33231375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 33231376 . G . PASS END=33231379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33231380 . T G, 50.00 PASS DP=28;MQ=249.44;MQRankSum=3.837;ReadPosRankSum=2.826;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,14,0:0.500,0.000:28:11,8,0:3,6,0:48:85,0,50,493,468,961:255,0,255:14,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,8,6:7,7,8,6:33231380 chr1 33231381 . T . PASS END=33231398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 33231399 . C . PASS END=33231402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 33231403 . G T, 50.00 PASS DP=26;MQ=249.55;MQRankSum=3.641;ReadPosRankSum=3.641;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,13,0:0.500,0.000:26:10,7,0:3,6,0:48:85,0,50,465,428,893:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,9,4:8,5,7,6:33231380 chr1 33231404 . C . PASS END=33231418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:25,0 chr1 33231419 . A . PASS END=33231419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,790:0,20,255:21,0 chr1 33231420 . A . PASS END=33231421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 33231422 . A . PASS END=33231422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:22,0 chr1 33231423 . A . PASS END=33231424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 33231425 . A . PASS END=33231425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 33231426 . A . PASS END=33231428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 33233388 . G . PASS END=33233391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 33233392 . T . PASS END=33233393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 33233394 . C . PASS END=33233401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 33233402 . G . PASS END=33233402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 33233403 . A . PASS END=33233404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr1 33233405 . A . PASS END=33233405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:29,0 chr1 33233406 . A . PASS END=33233409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 33233410 . C . PASS END=33233410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 33233411 . A . PASS END=33233415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,961:0,90,255:31,0 chr1 33233416 . T . PASS END=33233417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1064:0,63,255:30,0 chr1 33233418 . T . PASS END=33233419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1024:0,93,255:31,0 chr1 33233420 . A . PASS END=33233420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,978:0,60,255:28,0 chr1 33233421 . G . PASS END=33233428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1133:0,82,255:34,0 chr1 33233429 . C . PASS END=33233429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr1 33233430 . C . PASS END=33233430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:32,0 chr1 33233431 . T . PASS END=33233431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:30,0 chr1 33233432 . G . PASS END=33233558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:38:0,96,1426:0,96,255:40,0 chr1 33233663 . A . PASS END=33233718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,114,1710:0,120,255:40,0 chr1 33234253 . T . PASS END=33234253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 33234254 . C . PASS END=33234347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,986:0,81,255:40,0 chr1 33234348 . C . PASS END=33234361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,65,255:25,0 chr1 33234362 . T . PASS END=33234363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 33234364 . A . PASS END=33234364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:18,0 chr1 33234365 . T . PASS END=33234376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 33235274 . G . PASS END=33235287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr1 33235288 . C . PASS END=33235308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,529:0,48,255:16,0 chr1 33235309 . T . PASS END=33235309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 33235310 . C . PASS END=33235328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,515:0,48,255:17,0 chr1 33235329 . T . PASS END=33235329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 33235330 . C . PASS END=33235353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,675:0,41,255:17,0 chr1 33235354 . C . PASS END=33235354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 33235355 . T . PASS END=33235383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,531:0,48,255:16,0 chr1 33235384 . C . PASS END=33235384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 33235385 . T . PASS END=33235387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 33235481 . G . PASS END=33235487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 33235488 . G . PASS END=33235488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 33235489 . A . PASS END=33235495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 33235496 . G . PASS END=33235496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 33235497 . T . PASS END=33235511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,590:0,45,255:16,0 chr1 33235512 . G . PASS END=33235512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 33235513 . C . PASS END=33235525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 33235526 . G . PASS END=33235526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 33235527 . T . PASS END=33235527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr1 33235528 . G . PASS END=33235540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 33235541 . T . PASS END=33235547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:15:0,34,582:0,34,255:13,0 chr1 33235548 . C . PASS END=33235549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33235550 . C . PASS END=33235550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 33235551 . C . PASS END=33235555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,598:0,45,255:16,0 chr1 33235556 . T . PASS END=33235556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 33235557 . G . PASS END=33235557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 33235558 . G . PASS END=33235558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 33235559 . A . PASS END=33235561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33235562 . G . PASS END=33235562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 33235563 . C . PASS END=33235572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 33235573 . G . PASS END=33235573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 33235574 . G . PASS END=33235588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:17,0 chr1 33235589 . G . PASS END=33235612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 33235613 . T . PASS END=33235625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:11,0 chr1 33235626 . G A, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.793;ReadPosRankSum=1.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,7,0:0.583,0.000:12:4,2,0:1,5,0:48:85,0,49,250,179,429:235,0,158:5,0:5.0000e+01,6.9116e-05,5.2272e+01,2.5038e+02,2.1340e+02,4.3200e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,2,5:3,2,5,2 chr1 33235627 . G . PASS END=33235663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr1 33235664 . A . PASS END=33235671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 33235672 . C . PASS END=33235676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33235677 . C . PASS END=33235693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 33235694 . T . PASS END=33235703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 33235704 . G . PASS END=33235704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33235705 . T . PASS END=33235712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 33235713 . T . PASS END=33235736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,612:0,48,255:19,0 chr1 33235737 . G . PASS END=33235740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 33235741 . A . PASS END=33235742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33235743 . G . PASS END=33235777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 33235778 . G . PASS END=33235778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 33235779 . G . PASS END=33235796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 33235797 . C . PASS END=33235833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 33235834 . T . PASS END=33235834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 33235835 . C . PASS END=33235842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 33235843 . A . PASS END=33235865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,35,255:13,0 chr1 33235866 . T . PASS END=33235866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 33235867 . A . PASS END=33235885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr1 33235886 . T . PASS END=33235887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 33235888 . G . PASS END=33235901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 33235902 . G . PASS END=33235902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 33235903 . C . PASS END=33235910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 33235911 . A . PASS END=33235911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 33235912 . A . PASS END=33235913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33235914 . C . PASS END=33235946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:17,0 chr1 33235947 . A . PASS END=33235947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 33235948 . G . PASS END=33235981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,638:0,43,255:19,0 chr1 33235982 . G . PASS END=33235999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,829:0,66,255:22,0 chr1 33236000 . G . PASS END=33236000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 33236001 . C . PASS END=33236030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 33236031 . C . PASS END=33236031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 33236032 . C . PASS END=33236040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 33236041 . T . PASS END=33236061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,681:0,41,255:19,0 chr1 33236062 . G . PASS END=33236063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 33236064 . C . PASS END=33236074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 33236075 . T . PASS END=33236075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 33236076 . C . PASS END=33236076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33236077 . T . PASS END=33236100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 33236101 . C . PASS END=33236102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 33236103 . G . PASS END=33236107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 33236108 . A . PASS END=33236110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 33236111 . G . PASS END=33236116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 33236117 . C . PASS END=33236117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,480:0,6,255:11,0 chr1 33236118 . G . PASS END=33236125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 33236126 . A . PASS END=33236126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 33236127 . T . PASS END=33236128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 33236129 . G . PASS END=33236132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 33236133 . G . PASS END=33236140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr1 33236141 . C . PASS END=33236142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 33236143 . C . PASS END=33236143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 33236144 . C . PASS END=33236157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,310:0,24,255:9,0 chr1 33236158 . G . PASS END=33236173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr1 33236174 . G . PASS END=33236273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,512:0,41,255:19,0 chr1 33236274 . A . PASS END=33236274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 33236275 . C . PASS END=33236279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 33236280 . T . PASS END=33236280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 33236281 . C . PASS END=33236288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,684:0,51,255:19,0 chr1 33236289 . G . PASS END=33236290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33236291 . C . PASS END=33236309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr1 33236310 . G . PASS END=33236310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,659:0,8,255:15,0 chr1 33236311 . G . PASS END=33236335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,660:0,41,255:19,0 chr1 33236336 . T . PASS END=33236336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,590:0,13,255:18,0 chr1 33236337 . A . PASS END=33236337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 33236338 . G . PASS END=33236341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 33236342 . T . PASS END=33236425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,651:0,41,255:19,0 chr1 33236426 . C . PASS END=33236429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 33236430 . T . PASS END=33236430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 33236431 . C . PASS END=33236445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 33236446 . A . PASS END=33236505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,621:0,40,255:19,0 chr1 33236506 . C . PASS END=33236506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 33236507 . G . PASS END=33236508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33236509 . A . PASS END=33236537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,621:0,40,255:19,0 chr1 33236538 . C . PASS END=33236538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 33236539 . C . PASS END=33236540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33236541 . A . PASS END=33236553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 33236554 . A . PASS END=33236554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,335:0,9,255:12,0 chr1 33236555 . C . PASS END=33236555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,368:0,25,255:13,0 chr1 33236556 . C . PASS END=33236557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33236558 . T . LowGQ END=33236558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,277:24,0,255:10,0 chr1 33236559 . C . PASS END=33236561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33236562 . T . LowGQ END=33236562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,360:3,0,255:11,0 chr1 33236563 . C . PASS END=33236567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 33236568 . G . PASS END=33236568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,410:0,12,255:11,0 chr1 33236569 . G . PASS END=33236572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33236573 . T . PASS END=33236573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 33236574 . G . PASS END=33236575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33236576 . C . PASS END=33236576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,429:0,6,255:13,0 chr1 33236577 . A . PASS END=33236577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 33236578 . G . LowGQ END=33236578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,332:52,0,255:11,0 chr1 33236579 . G . PASS END=33236580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,399:0,39,255:13,0 chr1 33236581 . C . LowGQ END=33236581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,316:11,0,255:10,0 chr1 33236582 . C . PASS END=33236584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 33236585 . C . PASS END=33236585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 33236586 . T . PASS END=33236586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 33236587 . G . PASS END=33236587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 33236588 . C . PASS END=33236588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 33236589 . T . PASS END=33236589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:11,0 chr1 33236590 . T . PASS END=33236590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33236591 . C . PASS END=33236591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 33236592 . C . PASS END=33236593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33236594 . C . PASS END=33236594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 33236595 . A . PASS END=33236595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:11,0 chr1 33236596 . G . PASS END=33236596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:12,0 chr1 33236597 . G . PASS END=33236600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 33236601 . G . PASS END=33236601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,416:0,9,255:12,0 chr1 33236602 . G . PASS END=33236606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 33236607 . G . PASS END=33236607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 33236608 . C . PASS END=33236612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr1 33236613 . T . LowGQ END=33236613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:15,0 chr1 33236614 . A . PASS END=33236614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 33236615 . A . PASS END=33236615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 33236616 . A . PASS END=33236616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,585:0,54,255:18,0 chr1 33236617 . C . PASS END=33236617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 33236618 . C . PASS END=33236619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 33236620 . G . PASS END=33236622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 33236623 . C . PASS END=33236624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,652:0,54,255:18,0 chr1 33236625 . T . PASS END=33236626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 33236627 . T . PASS END=33236627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 33236628 . C . PASS END=33236628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr1 33236629 . A . PASS END=33236630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 33236631 . G . PASS END=33236632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,444:0,21,255:15,0 chr1 33236633 . C . PASS END=33236633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 33236634 . T . PASS END=33236634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 33236635 . C . PASS END=33236637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 33236638 . C . PASS END=33236638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:13,0 chr1 33236639 . G . PASS END=33236640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33236641 . T . PASS END=33236641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr1 33236642 . C . PASS END=33236646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 33236647 . G . PASS END=33236647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 33236648 . G . PASS END=33236650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 33236651 . C . PASS END=33236651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 33236652 . C . PASS END=33236654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 33236655 . C . PASS END=33236655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 33236656 . G . PASS END=33236657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33236658 . C . LowGQ END=33236658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:27,0,255:12,0 chr1 33236659 . T . PASS END=33236659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33236660 . C . PASS END=33236660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 33236661 . C . PASS END=33236662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33236663 . C . PASS END=33236663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 33236664 . T . PASS END=33236672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33236673 . G . PASS END=33236674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 33236675 . C . PASS END=33236679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 33236680 . T . PASS END=33236700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 33236701 . G . PASS END=33236704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,315:0,20,255:7,0 chr1 33236705 . C . PASS END=33236736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,188:6,0 chr1 33236737 . C . PASS END=33236746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 33236747 . A . PASS END=33236752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 33236753 . T . PASS END=33236762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 33236763 . T . PASS END=33236771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,449:0,33,255:13,0 chr1 33236772 . C . PASS END=33236813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,488:0,42,255:16,0 chr1 33236814 . G . PASS END=33236815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 33236816 . G . PASS END=33236819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 33236820 . T . PASS END=33236820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:15,0 chr1 33236821 . A . PASS END=33236826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 33236827 . G . PASS END=33236827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr1 33236828 . C . PASS END=33236832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 33236833 . C . PASS END=33236833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 33236834 . C . PASS END=33236843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 33236844 . C . PASS END=33236845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 33236846 . C . PASS END=33236854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,630:0,41,255:18,0 chr1 33236855 . T . PASS END=33236855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 33236856 . G . PASS END=33236857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 33236858 . T . PASS END=33236858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 33236859 . T . PASS END=33236859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 33236860 . C . PASS END=33236860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr1 33236861 . C . PASS END=33236865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr1 33236866 . C . PASS END=33236867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 33236868 . T . PASS END=33236875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:17,0 chr1 33236876 . C . PASS END=33236876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:14,0 chr1 33236877 . C . PASS END=33236886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 33236887 . A . PASS END=33236888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 33236889 . T . PASS END=33236889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:16,0 chr1 33236890 . C . LowGQ END=33236890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:1,0,255:15,0 chr1 33236891 . C . PASS END=33236891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 33236892 . T . PASS END=33236892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 33236893 . C . PASS END=33236896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 33236897 . C . PASS END=33236897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 33236898 . C . PASS END=33236905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 33236906 . C . PASS END=33236909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 33236910 . C . PASS END=33236911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33236912 . A . PASS END=33236914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,596:0,48,255:16,0 chr1 33236915 . C . PASS END=33236915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 33236916 . A . PASS END=33236916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,515:0,20,255:15,0 chr1 33236917 . A . PASS END=33236918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 33236919 . C . PASS END=33236919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 33236920 . T . PASS END=33236921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 33236922 . G . PASS END=33236922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 33236923 . A . PASS END=33236928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 33236929 . C . PASS END=33236955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 33236956 . G . PASS END=33236962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:18,0 chr1 33236963 . C . PASS END=33236963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,565:0,10,255:15,0 chr1 33236964 . A . LowGQ END=33236964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,478:6,0,255:14,0 chr1 33236965 . C . PASS END=33236967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,653:0,43,255:15,0 chr1 33236968 . C . PASS END=33236968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:15,0 chr1 33236969 . C . PASS END=33236969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 33236970 . A . LowGQ END=33236970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,357:35,0,255:13,0 chr1 33236971 . C . PASS END=33236972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 33236973 . T . PASS END=33236973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,442:0,37,255:14,0 chr1 33236974 . T . PASS END=33236974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:20:18:0,20,423:0,20,255:13,0 chr1 33236975 . C . LowGQ END=33236976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,410:0,0,255:12,0 chr1 33236977 . C . PASS END=33236978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:14,0 chr1 33236979 . A . LowGQ END=33236979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,447:42,0,255:13,0 chr1 33236980 . C . PASS END=33236980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:16,0 chr1 33236981 . C . PASS END=33236981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,603:0,24,255:17,0 chr1 33236982 . C . PASS END=33236982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 33236983 . C . PASS END=33236983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,590:0,10,255:15,0 chr1 33236984 . C . PASS END=33236984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:16,0 chr1 33236985 . A . LowGQ END=33236986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,6:20:0:20:0,0,294:45,0,255:14,0 chr1 33236987 . C . PASS END=33236987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 33236988 . T . LowGQ END=33236990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,341:32,0,255:15,0 chr1 33236991 . T . PASS END=33236992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:24:19:0,24,513:0,24,255:17,0 chr1 33236993 . A . LowGQ END=33236994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,379:9,0,255:15,0 chr1 33236995 . C . PASS END=33236995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,532:0,40,255:17,0 chr1 33236996 . C . LowGQ END=33236997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,384:0,0,255:16,0 chr1 33236998 . C . PASS END=33237002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,599:0,54,255:18,0 chr1 33237003 . A . PASS END=33237003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,490:0,21,255:16,0 chr1 33237004 . C . PASS END=33237005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 33237006 . A . LowGQ END=33237006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,402:27,0,255:11,0 chr1 33237007 . C . PASS END=33237009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 33237010 . A . PASS END=33237010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,474:0,21,255:13,0 chr1 33237011 . C . PASS END=33237011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:15,0 chr1 33237012 . T . PASS END=33237012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,487:0,18,255:15,0 chr1 33237013 . A . PASS END=33237013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,592:0,40,255:16,0 chr1 33237014 . A . PASS END=33237014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,537:0,10,255:14,0 chr1 33237015 . G . LowGQ END=33237017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,455:0,0,255:16,0 chr1 33237018 . G . PASS END=33237018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:15,0 chr1 33237019 . C . PASS END=33237019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 33237020 . C . PASS END=33237020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 33237021 . A . LowGQ END=33237021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,431:12,0,255:13,0 chr1 33237022 . G . PASS END=33237022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,471:0,15,255:16,0 chr1 33237023 . A . PASS END=33237023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,531:0,37,255:16,0 chr1 33237024 . G . PASS END=33237024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:16,0 chr1 33237025 . G . PASS END=33237026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,550:0,34,255:15,0 chr1 33237027 . G . PASS END=33237027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr1 33237028 . G . PASS END=33237028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33237029 . T . LowGQ END=33237029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,418:35,0,255:12,0 chr1 33237030 . T . PASS END=33237030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:14,0 chr1 33237031 . G . PASS END=33237031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,463:0,1,255:13,0 chr1 33237032 . T . PASS END=33237032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 33237033 . G . PASS END=33237033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:13,0 chr1 33237034 . G . PASS END=33237034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33237035 . A . PASS END=33237035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,504:0,4,255:13,0 chr1 33237036 . G . PASS END=33237036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33237037 . G . PASS END=33237037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 33237038 . C . LowGQ END=33237039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:0,0,255:12,0 chr1 33237040 . C . PASS END=33237041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 33237042 . A . LowGQ END=33237043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,308:27,0,255:11,0 chr1 33237044 . C . PASS END=33237044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 33237045 . T . PASS END=33237045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:11,0 chr1 33237046 . G . LowGQ END=33237046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,396:2,0,255:12,0 chr1 33237047 . C . PASS END=33237047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 33237048 . C . PASS END=33237048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 33237049 . T . PASS END=33237049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,380:0,9,255:11,0 chr1 33237050 . C . PASS END=33237051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 33237052 . G . PASS END=33237052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:11,0 chr1 33237053 . A . PASS END=33237053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 33237054 . G . LowGQ END=33237054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,410:10,0,255:13,0 chr1 33237055 . A . PASS END=33237055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,404:0,12,255:12,0 chr1 33237056 . C . PASS END=33237056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33237057 . T . PASS END=33237057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,482:0,18,255:14,0 chr1 33237058 . G . PASS END=33237058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:15,0 chr1 33237059 . C . PASS END=33237059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 33237060 . T . PASS END=33237060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,519:0,21,255:14,0 chr1 33237061 . G . PASS END=33237061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 33237062 . A . LowGQ END=33237062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,543:1,0,255:15,0 chr1 33237063 . G . PASS END=33237063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr1 33237064 . G . PASS END=33237064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 33237065 . A . PASS END=33237067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,537:0,34,255:16,0 chr1 33237068 . C . PASS END=33237068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:14,0 chr1 33237069 . C . PASS END=33237070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33237071 . T . PASS END=33237071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 33237072 . C . PASS END=33237073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33237074 . A . PASS END=33237074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:14,0 chr1 33237075 . A . PASS END=33237076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 33237077 . A . PASS END=33237077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,459:0,4,255:12,0 chr1 33237078 . T . PASS END=33237078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:13,0 chr1 33237079 . C . PASS END=33237079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:12,0 chr1 33237080 . C . PASS END=33237082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 33237083 . A . PASS END=33237083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 33237084 . C . PASS END=33237084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 33237085 . T . PASS END=33237085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:11,0 chr1 33237086 . G . PASS END=33237086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr1 33237087 . G . PASS END=33237088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 33237089 . C . PASS END=33237092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 33237093 . T . PASS END=33237093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,363:0,6,255:11,0 chr1 33237094 . C . PASS END=33237094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33237095 . C . PASS END=33237095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 33237096 . C . PASS END=33237098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33237099 . A . LowGQ END=33237099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,360:3,0,255:13,0 chr1 33237100 . C . PASS END=33237100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:12,0 chr1 33237101 . C . PASS END=33237104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 33237105 . T . PASS END=33237105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,368:0,25,255:13,0 chr1 33237106 . G . PASS END=33237106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 33237107 . C . PASS END=33237107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 33237108 . C . PASS END=33237110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 33237111 . T . PASS END=33237111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,346:0,25,255:13,0 chr1 33237112 . G . PASS END=33237112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 33237113 . A . PASS END=33237113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr1 33237114 . G . PASS END=33237114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:13,0 chr1 33237115 . G . PASS END=33237115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33237116 . A . PASS END=33237116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,386:0,9,255:12,0 chr1 33237117 . G . PASS END=33237117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 33237118 . C . PASS END=33237120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,360:0,25,255:11,0 chr1 33237121 . G . PASS END=33237124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 33237125 . T . PASS END=33237125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:9,0 chr1 33237126 . G . PASS END=33237126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 33237127 . T . PASS END=33237127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:9,0 chr1 33237128 . C . PASS END=33237128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 33237129 . C . LowGQ END=33237129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:10,0 chr1 33237130 . A . PASS END=33237130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33237131 . T . PASS END=33237131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr1 33237132 . G . PASS END=33237135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,315:0,33,255:11,0 chr1 33237136 . G . PASS END=33237136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 33237137 . A . PASS END=33237138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 33237139 . T . PASS END=33237139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:10,0 chr1 33237140 . T . PASS END=33237140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 33237141 . C . LowGQ END=33237141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 33237142 . C . PASS END=33237146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,358:0,33,255:12,0 chr1 33237147 . A . PASS END=33237147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,319:0,19,255:11,0 chr1 33237148 . C . PASS END=33237148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 33237149 . C . PASS END=33237157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 33237158 . C . PASS END=33237159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 33237160 . T . PASS END=33237166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 33237167 . C . PASS END=33237167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 33237168 . T . PASS END=33237172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 33237173 . C . PASS END=33237173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr1 33237174 . C . PASS END=33237174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33237175 . A . PASS END=33237175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr1 33237176 . G . PASS END=33237178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 33237179 . C . PASS END=33237179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 33237180 . T . PASS END=33237180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 33237181 . G . PASS END=33237182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr1 33237183 . G . PASS END=33237184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 33237185 . C . LowGQ END=33237186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,332:0,0,255:11,0 chr1 33237187 . G . PASS END=33237188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33237189 . A . PASS END=33237189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 33237190 . G . PASS END=33237193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33237194 . C . PASS END=33237194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 33237195 . T . PASS END=33237197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 33237198 . A . PASS END=33237198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:8,0 chr1 33237199 . G . PASS END=33237202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:12:0,23,405:0,23,255:9,0 chr1 33237203 . C . PASS END=33237203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 33237204 . C . PASS END=33237204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 33237205 . C . PASS END=33237206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 33237207 . A . PASS END=33237207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 33237208 . G . PASS END=33237212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr1 33237213 . T . PASS END=33237216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 33237217 . A . PASS END=33237217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 33237218 . G . PASS END=33237221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 33237222 . C . PASS END=33237223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33237224 . C . PASS END=33237224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 33237225 . G . PASS END=33237242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 33237243 . A . PASS END=33237243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 33237244 . G . PASS END=33237244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:11,0 chr1 33237245 . C . PASS END=33237246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 33237247 . A . PASS END=33237247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 33237248 . C . PASS END=33237255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,354:0,36,255:12,0 chr1 33237256 . C . PASS END=33237256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 33237257 . A . PASS END=33237257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33237258 . G . PASS END=33237258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 33237259 . A . PASS END=33237269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 33237270 . G . PASS END=33237274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 33237275 . G . PASS END=33237275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 33237276 . C . PASS END=33237277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 33237278 . C . PASS END=33237278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:14,0 chr1 33237279 . A . PASS END=33237280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 33237281 . A . PASS END=33237281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 33237282 . C . PASS END=33237285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33237286 . C . PASS END=33237287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33237288 . T . PASS END=33237288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 33237289 . C . PASS END=33237291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33237292 . G . PASS END=33237292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:13,0 chr1 33237293 . C . PASS END=33237293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33237294 . T . PASS END=33237294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr1 33237295 . C . PASS END=33237299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 33237300 . A . PASS END=33237300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 33237301 . G . PASS END=33237301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 33237302 . C . PASS END=33237311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 33237312 . T . PASS END=33237312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 33237313 . G . PASS END=33237373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,637:0,41,255:19,0 chr1 33237374 . A . PASS END=33237380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 33237381 . T . PASS END=33237390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 33237391 . A . PASS END=33237391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 33237392 . G . PASS END=33237458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,604:0,48,255:18,0 chr1 33237459 . T . PASS END=33237487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:12,0 chr1 33237488 . T . PASS END=33237488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 33237489 . G . PASS END=33237500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:13,0 chr1 33237501 . C . PASS END=33237501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 33237502 . C . PASS END=33237514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,466:0,39,255:13,0 chr1 33237515 . T . PASS END=33237515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 33237516 . G . PASS END=33237524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 33237525 . C . PASS END=33237525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 33237526 . C . PASS END=33237533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 33237534 . G . PASS END=33237537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:37:16:0,37,585:0,37,255:14,0 chr1 33237538 . G . PASS END=33237640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:18,0 chr1 33237641 . G . PASS END=33237641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 33237642 . A . PASS END=33237662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:16,0 chr1 33237663 . G . PASS END=33237675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,48,255:13,0 chr1 33237676 . C . PASS END=33237676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:12,0 chr1 33237677 . C . PASS END=33237685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 33237686 . C . LowGQ END=33237686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr1 33237687 . G . PASS END=33237708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 33237709 . G . PASS END=33237709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 33237710 . G . PASS END=33237735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 33237736 . C . PASS END=33237786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 33237787 . C . PASS END=33237790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 33237791 . G . PASS END=33237849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,54,255:19,0 chr1 33237850 . C . PASS END=33237853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 33237854 . T . PASS END=33237870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33237871 . G . PASS END=33237873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 33237874 . G . PASS END=33237874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 33237875 . G . PASS END=33237875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33237876 . A . PASS END=33237880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 33237881 . C . PASS END=33237881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:15,0 chr1 33237882 . C . PASS END=33237891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:16,0 chr1 33237892 . T . PASS END=33237893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 33237894 . C . PASS END=33237901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr1 33237902 . A . PASS END=33237902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 33237903 . C . PASS END=33237905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 33237906 . T . PASS END=33237906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 33237907 . C . PASS END=33237909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 33237910 . G . PASS END=33237910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 33237911 . C . PASS END=33237914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:19,0 chr1 33237915 . G . PASS END=33237916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 33237917 . C . PASS END=33237945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,629:0,43,255:19,0 chr1 33237946 . C . PASS END=33237948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 33237949 . C . PASS END=33237949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 33237950 . A . PASS END=33237953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 33237954 . C . PASS END=33237956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33237957 . G . PASS END=33237959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 33237960 . C . PASS END=33237960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 33237961 . A . PASS END=33237962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33237963 . G . PASS END=33237963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 33237964 . A . PASS END=33237966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 33237967 . A . PASS END=33237968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 33237969 . G . PASS END=33237977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,815:0,69,255:26,0 chr1 33237978 . G . PASS END=33237979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 33237980 . C . PASS END=33238005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,848:0,61,255:25,0 chr1 33238006 . G . PASS END=33238006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 33238007 . T . PASS END=33238034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,909:0,75,255:25,0 chr1 33238035 . G . PASS END=33238035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 33238036 . G . PASS END=33238042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 33238466 . A . PASS END=33238488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1154:0,80,255:32,0 chr1 33240858 . A . PASS END=33240858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 33240983 . T . PASS END=33240983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 33241043 . T . PASS END=33241043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 33241183 . C . PASS END=33241183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33241213 . C . PASS END=33241213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 33241582 . C . PASS END=33241691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:34:0,81,1215:0,102,255:40,0 chr1 33241692 . C . PASS END=33241692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:23,0 chr1 33244981 . A . PASS END=33244981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 33244983 . C . PASS END=33244991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 33244992 . C . PASS END=33244997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 33244998 . G . PASS END=33245002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33245003 . T . PASS END=33245003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 33245004 . C . PASS END=33245008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 33245009 . T . PASS END=33245009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 33245010 . G . PASS END=33245087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1116:0,87,255:40,0 chr1 33245088 . A . PASS END=33245088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:26,0 chr1 33245089 . G . PASS END=33245103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:28,0 chr1 33245104 . A . PASS END=33245104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,931:0,45,255:26,0 chr1 33245105 . C . PASS END=33245105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33245106 . C . PASS END=33245106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 33245107 . T . PASS END=33245108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33245109 . G . PASS END=33245124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,962:0,65,255:26,0 chr1 33245686 . A . PASS END=33245873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:33:0,81,1215:0,85,255:40,0 chr1 33245874 . T . PASS END=33245879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 33246649 . C . PASS END=33246689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:35:0,92,1349:0,92,255:40,0 chr1 33246690 . G . PASS END=33246690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1419:0,71,255:36,0 chr1 33246691 . G . PASS END=33246694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:42:0,87,1476:0,87,255:40,2 chr1 33246695 . G . PASS END=33246695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:40,0 chr1 33246696 . G . PASS END=33246746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,99,1297:0,100,255:40,0 chr1 33248002 . T . PASS END=33248002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 33248005 . T . PASS END=33248013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,870:0,72,255:24,0 chr1 33248014 . A . PASS END=33248014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 33248015 . G . PASS END=33248024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 33248025 . T . PASS END=33248025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:25,0 chr1 33248026 . A . PASS END=33248030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 33248031 . G . PASS END=33248031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 33248032 . C . PASS END=33248112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1119:0,87,255:35,0 chr1 33248113 . A . PASS END=33248140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,945:0,62,255:26,0 chr1 33251963 . C . PASS END=33252048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,103,1721:0,103,255:40,0 chr1 33252051 . A . PASS END=33252051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 33252541 . C . PASS END=33252541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 33252542 . G . PASS END=33252676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,984:0,81,255:40,0 chr1 33252687 . T . PASS END=33252687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 33256763 . C . PASS END=33256846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:44:0,120,1800:0,127,255:40,0 chr1 33256847 . A . PASS END=33256855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,114,1710:0,131,255:40,0 chr1 33263193 . T . PASS END=33263444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:89:40:0,89,1377:0,89,255:40,0 chr1 33263458 . C . PASS END=33263458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 33272073 . C . PASS END=33272073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1527:0,120,255:40,0 chr1 33272083 . C . PASS END=33272212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:34:0,81,1215:0,89,255:40,0 chr1 33276188 . T . PASS END=33276188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33276192 . T . PASS END=33276197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 33276198 . A . PASS END=33276201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 33276202 . G . PASS END=33276367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1260:0,92,255:40,0 chr1 33276369 . T . PASS END=33276369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr1 33276512 . C . PASS END=33276658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:43:0,90,1350:0,109,255:40,0 chr1 33282789 . C . PASS END=33282793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr1 33282794 . G . PASS END=33282794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 33282795 . G . PASS END=33282795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,958:0,48,255:28,0 chr1 33282796 . T . PASS END=33282807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 33282808 . A . PASS END=33282812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 33282813 . C . PASS END=33282814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33282815 . G . PASS END=33282837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 33282838 . T . PASS END=33282845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,56,255:19,0 chr1 33282955 . C . PASS END=33282955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 33283002 . C . PASS END=33283002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 33283012 . A . PASS END=33283012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 33283105 . C . PASS END=33283105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33283114 . G . PASS END=33283114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 33283178 . G . PASS END=33283178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 33283260 . G . PASS END=33283260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 33283286 . C . LowGQ END=33283286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 33283465 . T . PASS END=33283465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 33283627 . C . PASS END=33283627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 33291701 . A . PASS END=33291707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 33291708 . G . PASS END=33291719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:25,0 chr1 33291720 . C . PASS END=33291720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33291721 . C . PASS END=33291721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 33291722 . T . PASS END=33291769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1197:0,86,255:35,0 chr1 33291770 . T . PASS END=33291770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1097:0,50,255:32,0 chr1 33291771 . T . PASS END=33291793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1195:0,83,255:35,0 chr1 33291794 . G . PASS END=33291794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:30,0 chr1 33291795 . A . PASS END=33292235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:36:0,80,1130:0,80,255:40,0 chr1 33292236 . A . PASS END=33292236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:35,0 chr1 33292237 . A . PASS END=33292521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1170:0,83,255:40,0 chr1 33292522 . A . PASS END=33292531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,969:0,65,255:26,0 chr1 33293594 . C . PASS END=33293682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:94:46:0,94,1665:0,94,255:40,0 chr1 33295565 . G . PASS END=33295668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,149,255:40,0 chr1 33297935 . C . PASS END=33297960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:96:0,120,1800:0,248,255:40,0 chr1 33318680 . G . PASS END=33318767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:37:0,87,1316:0,87,255:40,0 chr1 33321525 . A . PASS END=33321639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:35:0,88,1156:0,88,255:40,0 chr1 33329339 . T . PASS END=33329353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,117,1755:0,123,255:40,0 chr1 33329895 . T . PASS END=33329900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:52:0,120,1800:0,126,255:40,0 chr1 33330211 . T . PASS END=33330213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 33330214 . C . PASS END=33330214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 33330215 . C . PASS END=33330240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 33330241 . C . PASS END=33330253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,768:0,63,255:23,0 chr1 33330254 . C . PASS END=33330254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 33330255 . T . PASS END=33330262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 33330263 . A . PASS END=33330263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 33330264 . C . PASS END=33330286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,825:0,62,255:25,0 chr1 33330287 . C . PASS END=33330287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 33330288 . C . PASS END=33330342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,909:0,62,255:26,0 chr1 33330343 . A . PASS END=33330343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr1 33330344 . T . PASS END=33330349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 33330350 . T . PASS END=33330350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:22,0 chr1 33330351 . C . PASS END=33330362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 33330363 . T . PASS END=33330364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 33330365 . A . PASS END=33330372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 33330373 . C . PASS END=33330382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 33330383 . A . PASS END=33330383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33330384 . A . PASS END=33330394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:17,0 chr1 33330395 . A . PASS END=33330398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,675:0,44,255:15,0 chr1 33333354 . C . PASS END=33333443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,131,255:40,0 chr1 33333791 . C . PASS END=33333794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 33333795 . G . PASS END=33333795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 33333796 . T . PASS END=33333796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 33333797 . T . PASS END=33333797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 33333798 . C . PASS END=33333816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 33333817 . G . PASS END=33333828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,909:0,69,255:26,0 chr1 33333829 . G . PASS END=33333855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1113:0,93,255:32,0 chr1 33333856 . G . PASS END=33333856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 33333857 . G . PASS END=33333888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:31:0,88,1105:0,88,255:34,0 chr1 33333889 . T . PASS END=33333889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1028:0,65,255:30,0 chr1 33333890 . G . PASS END=33333970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1272:0,87,255:40,0 chr1 33333971 . G . PASS END=33333979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 33333980 . C . PASS END=33333985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 33333986 . T . PASS END=33333986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 33333987 . C . PASS END=33333987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33333988 . T . PASS END=33333988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 33333989 . T . PASS END=33333989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33334483 . C . PASS END=33334492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 33334493 . A . PASS END=33334493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:20,0 chr1 33334494 . T . PASS END=33334509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,746:0,66,255:24,0 chr1 33334510 . A . PASS END=33334510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 33334511 . A . PASS END=33334511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 33334512 . C . PASS END=33334512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 33334513 . C . PASS END=33334518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 33334519 . C . PASS END=33334524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33334525 . A . PASS END=33334525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 33334526 . A . PASS END=33334541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 33334542 . C . PASS END=33334543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 33334544 . G . PASS END=33334545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 33334546 . A . PASS END=33334546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 33334547 . G . PASS END=33334551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 33334552 . G . PASS END=33334552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 33334553 . G . PASS END=33334553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 33334554 . C . PASS END=33334555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 33334556 . T . PASS END=33334563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 33334564 . C . PASS END=33334565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1033:0,71,255:28,0 chr1 33334566 . T . PASS END=33334566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 33334567 . G . PASS END=33334567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 33334568 . A . PASS END=33334576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1092:0,87,255:29,0 chr1 33334577 . T . PASS END=33334597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,65,255:26,0 chr1 33334598 . T . PASS END=33334598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:20,0 chr1 33336254 . C . PASS END=33336255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 33336256 . G . PASS END=33336256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 33336257 . C . PASS END=33336283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 33336284 . C . PASS END=33336285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 33336286 . A . PASS END=33336286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 33336287 . G . PASS END=33336306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:7,0 chr1 33336307 . C . PASS END=33336339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:6,0 chr1 33336340 . G . PASS END=33336347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr1 33354500 . A . PASS END=33354542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 33354543 . A . PASS END=33354548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33354549 . G . PASS END=33354551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 33354552 . A . PASS END=33354555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 33354556 . C . PASS END=33354588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:46:17:0,46,651:0,46,255:19,0 chr1 33354589 . G . PASS END=33354590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 33354591 . A . PASS END=33354591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 33354592 . C . PASS END=33354594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 33354595 . G . PASS END=33354612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr1 33354613 . C . PASS END=33354613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 33354614 . C . PASS END=33354616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 33354617 . A . PASS END=33354617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 33354618 . C . PASS END=33354624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr1 33354625 . C . PASS END=33354625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 33354626 . C . PASS END=33354639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,676:0,57,255:19,0 chr1 33354640 . G . PASS END=33354647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 33354648 . A . PASS END=33354648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33354649 . G . PASS END=33354657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 33354658 . C . PASS END=33354658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 33354659 . A . PASS END=33354659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 33354660 . A . PASS END=33354660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:20,0 chr1 33354661 . C . PASS END=33354663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 33354664 . C . PASS END=33354664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 33354665 . T . PASS END=33354674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 33354675 . G . PASS END=33354675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 33354676 . T . PASS END=33354684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 33354685 . C . PASS END=33354685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 33354686 . A . PASS END=33354694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 33354695 . G . PASS END=33354695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 33354696 . A . PASS END=33354700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 33354701 . G . PASS END=33354717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 33354718 . C . PASS END=33354720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33354721 . C . PASS END=33354740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,659:0,41,255:20,0 chr1 33354741 . A . PASS END=33354741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 33354742 . C . PASS END=33354743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33354744 . T . PASS END=33354762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:24,0 chr1 33354763 . G . PASS END=33354763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 33354764 . C . PASS END=33354802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:26,0 chr1 33354803 . A . PASS END=33354803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 33354804 . T . PASS END=33354813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 33354814 . C . PASS END=33354831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr1 33354832 . C . PASS END=33354835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 33354836 . A . PASS END=33354839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 33354840 . G . PASS END=33354840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33354841 . C . PASS END=33354842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 33354843 . A . PASS END=33354843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 33354844 . C . PASS END=33354861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:18,0 chr1 33354862 . G . PASS END=33354862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 33354863 . C . PASS END=33354868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 33354869 . A . PASS END=33354869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr1 33354870 . T . PASS END=33354873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33354874 . G . PASS END=33354874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 33354875 . C . PASS END=33354877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 33359125 . G . PASS END=33359126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 33359127 . C . PASS END=33359127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr1 33359128 . A . PASS END=33359131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,832:0,61,255:26,0 chr1 33359132 . A . PASS END=33359132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:26,0 chr1 33359133 . C . PASS END=33359133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 33359134 . A . PASS END=33359134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33359135 . A . PASS END=33359135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:26,0 chr1 33359136 . G . PASS END=33359136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 33359137 . A . PASS END=33359137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:23:30:0,23,778:0,23,255:26,0 chr1 33359138 . T . PASS END=33359139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1007:0,90,255:30,0 chr1 33359140 . G . PASS END=33359140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 33359141 . T . PASS END=33359143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1156:0,93,255:31,0 chr1 33359144 . C . PASS END=33359144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr1 33359145 . G . PASS END=33359145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 33359146 . T . PASS END=33359147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,956:0,60,255:29,0 chr1 33359148 . C . PASS END=33359150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1139:0,80,255:30,0 chr1 33359151 . G . PASS END=33359152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1028:0,65,255:30,0 chr1 33359153 . T . PASS END=33359157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1089:0,82,255:33,0 chr1 33359158 . A . PASS END=33359158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,954:0,16,255:30,0 chr1 33359159 . T . PASS END=33359161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1182:0,88,255:35,0 chr1 33359162 . C . PASS END=33359162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1109:0,36,255:32,0 chr1 33359163 . G . PASS END=33359163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 33359164 . G . PASS END=33359164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1135:0,61,255:33,0 chr1 33359165 . A . PASS END=33359167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1152:0,88,255:35,0 chr1 33359168 . A . PASS END=33359168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:33,0 chr1 33359169 . C . PASS END=33359176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1136:0,88,255:35,0 chr1 33359177 . C . PASS END=33359177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:32,0 chr1 33359178 . C . PASS END=33359184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1173:0,88,255:33,0 chr1 33359185 . A . PASS END=33359185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1225:0,74,255:30,0 chr1 33359186 . A . PASS END=33359186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,1000:0,16,255:28,0 chr1 33359187 . G . PASS END=33359195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1038:0,85,255:31,0 chr1 33359196 . G . PASS END=33359197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,961:0,79,255:30,0 chr1 33359198 . A . PASS END=33359203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 33359204 . T . PASS END=33359204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:29:32:0,29,862:0,29,255:27,0 chr1 33359205 . C . PASS END=33359205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 33359206 . C . PASS END=33359206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1028:0,57,255:30,0 chr1 33359207 . G . PASS END=33359208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 33359209 . C . PASS END=33359209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:45:31:0,45,883:0,45,255:28,0 chr1 33359210 . A . PASS END=33359210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:29,0 chr1 33359211 . A . PASS END=33359211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 33359212 . A . PASS END=33359213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,934:0,62,255:30,0 chr1 33359214 . G . PASS END=33359214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:28,0 chr1 33359215 . G . PASS END=33359215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,944:0,40,255:27,0 chr1 33359216 . A . PASS END=33359221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr1 33359222 . A . PASS END=33359230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:28:0,65,787:0,65,255:26,0 chr1 33359366 . G . PASS END=33359369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:24,0 chr1 33359370 . G . PASS END=33359370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,836:0,17,255:23,0 chr1 33359371 . C . PASS END=33359371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 33359372 . T . PASS END=33359372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:24,0 chr1 33359373 . G . PASS END=33359374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:25,0 chr1 33359375 . C . PASS END=33359375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:25,0 chr1 33359376 . C . PASS END=33359376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 33359377 . T . PASS END=33359377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,776:0,17,255:24,0 chr1 33359378 . T . PASS END=33359382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 33359383 . G . PASS END=33359383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33359384 . A . PASS END=33359384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,886:0,40,255:27,0 chr1 33359385 . G . PASS END=33359385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33359386 . T . PASS END=33359386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 33359387 . T . PASS END=33359389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1078:0,90,255:30,0 chr1 33359390 . T . PASS END=33359390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 33359391 . C . PASS END=33359391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:29,0 chr1 33359392 . C . PASS END=33359407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:32,0 chr1 33359408 . A . PASS END=33359408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 33359409 . C . PASS END=33359437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1111:0,90,255:34,0 chr1 33359438 . A . PASS END=33359438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 33359439 . C . PASS END=33359448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 33359449 . G . PASS END=33359463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,894:0,62,255:26,0 chr1 33360406 . T . PASS END=33360418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,823:0,69,255:26,0 chr1 33360419 . G . PASS END=33360509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:28:0,82,1066:0,82,255:37,0 chr1 33360510 . A . PASS END=33360510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:30,0 chr1 33360511 . C . PASS END=33360534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1109:0,80,255:31,0 chr1 33360906 . C . PASS END=33360916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 33360917 . T . PASS END=33360928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 33360929 . A . PASS END=33360959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 33360960 . G . PASS END=33360961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 33360962 . G . PASS END=33360973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 33360974 . G . PASS END=33360976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 33360977 . C . PASS END=33360982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33360983 . A . PASS END=33360983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,576:0,27,255:17,0 chr1 33360984 . C . PASS END=33361000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,706:0,57,255:19,0 chr1 33361001 . A . PASS END=33361003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 33361004 . G . PASS END=33361005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 33361006 . A . PASS END=33361006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:15,0 chr1 33361007 . C . PASS END=33361007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 33361008 . T . PASS END=33361008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,643:0,5,255:14,0 chr1 33361009 . A . PASS END=33361010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 33361011 . G . PASS END=33361013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:12:17:0,12,551:0,12,255:15,0 chr1 33361014 . G . PASS END=33361014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33361015 . A . PASS END=33361019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 33361020 . C . PASS END=33361020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33361021 . C . PASS END=33361022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 33361023 . G . PASS END=33361023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33361024 . A . PASS END=33361024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr1 33361025 . G . PASS END=33361025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 33361026 . G . PASS END=33361028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:14,0 chr1 33361029 . C . PASS END=33361029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 33361030 . A . PASS END=33361032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:13,0 chr1 33361033 . C . PASS END=33361034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 33361035 . G . PASS END=33361035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:11,0 chr1 33361036 . G . PASS END=33361036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr1 33361037 . A . PASS END=33361037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:11,0 chr1 33361038 . G . PASS END=33361040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:11,0 chr1 33361156 . A . PASS END=33361157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 33361158 . A . PASS END=33361158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 33361159 . A . PASS END=33361175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr1 33361176 . A . PASS END=33361269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1031:0,80,255:33,0 chr1 33361270 . G . PASS END=33361272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:26,0 chr1 33361273 . G . PASS END=33361276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 33361277 . A . PASS END=33361277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 33361278 . A . PASS END=33361283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 33361284 . C . PASS END=33361312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 33361313 . C . PASS END=33361321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 33361322 . C . PASS END=33361324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 33361325 . G . PASS END=33361333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,53,255:17,0 chr1 33361334 . A . PASS END=33361344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:16:0,30,450:0,34,255:12,0 chr1 33361511 . C . PASS END=33361536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1019:0,80,255:32,0 chr1 33361537 . A . PASS END=33361537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 33361538 . C . PASS END=33361543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1125:0,90,255:31,0 chr1 33361544 . G . PASS END=33361544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 33361545 . A . PASS END=33361556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 33361557 . C . PASS END=33361561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1124:0,77,255:27,0 chr1 33361562 . A . PASS END=33361563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 33361564 . T . PASS END=33361564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 33361565 . G . PASS END=33361565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33361566 . A . PASS END=33361570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 33363727 . C . PASS END=33363887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1166:0,82,255:40,0 chr1 33363888 . G . PASS END=33363888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 33363889 . C . PASS END=33363890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 33363891 . C . PASS END=33363907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,63,255:26,0 chr1 33363908 . A . PASS END=33363920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,621:0,40,255:19,0 chr1 33366824 . C . PASS END=33366839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 33402407 . T . PASS END=33402419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1202:0,86,255:35,0 chr1 33402420 . T . PASS END=33402420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:33,0 chr1 33402421 . C . PASS END=33402440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:35:0,86,1258:0,86,255:39,0 chr1 33402441 . A . PASS END=33402441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1256:0,70,255:37,0 chr1 33402442 . C . PASS END=33402600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:34:0,80,1280:0,80,255:39,0 chr1 33402601 . T . PASS END=33402601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:29,0 chr1 33402602 . C . PASS END=33402860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:36:0,81,1261:0,81,255:40,0 chr1 33402889 . T . PASS END=33402899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1305:0,113,255:35,0 chr1 33402900 . T . PASS END=33402902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,97,255:24,0 chr1 33402903 . T . PASS END=33402906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 33402907 . A . PASS END=33402910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:26,0 chr1 33403998 . C . PASS END=33404129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:37:0,95,1352:0,95,255:40,0 chr1 33407853 . C . PASS END=33407863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:18,0 chr1 33407864 . T . PASS END=33407864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 33407865 . C . PASS END=33407880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,638:0,54,255:19,0 chr1 33407881 . G . PASS END=33407888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,668:0,60,255:26,0 chr1 33407889 . C . PASS END=33407905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:30,0 chr1 33407906 . T . PASS END=33407906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 33407907 . G . PASS END=33407907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 33407908 . A . PASS END=33407908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 33407909 . G . PASS END=33408048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1037:0,83,255:40,0 chr1 33408049 . A . PASS END=33408060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 33409620 . C . PASS END=33409623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:26,0 chr1 33409624 . G . PASS END=33409628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 33409629 . G . PASS END=33409629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 33409630 . A . PASS END=33409630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 33409631 . C . PASS END=33409631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:26,0 chr1 33409632 . C . PASS END=33409632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:33:28:0,33,659:0,33,255:24,0 chr1 33409633 . A . PASS END=33409633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,879:0,67,255:26,0 chr1 33409634 . T . PASS END=33409636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33409637 . T . PASS END=33409637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 33409638 . C . PASS END=33409643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr1 33409644 . C . PASS END=33409644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 33409645 . A . PASS END=33409645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 33409646 . A . PASS END=33409646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 33409647 . A . PASS END=33409648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33409649 . T . PASS END=33409649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 33409650 . C . PASS END=33409655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 33409656 . T . PASS END=33409660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 33409661 . C . PASS END=33409661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 33409662 . C . PASS END=33409662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 33409663 . T . PASS END=33409664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,984:0,60,255:27,0 chr1 33409665 . T . PASS END=33409669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 33409670 . T . PASS END=33409670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:30,0 chr1 33409671 . T . PASS END=33409692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1133:0,86,255:33,0 chr1 33409693 . G A, 43.09 PASS DP=32;MQ=250.00;MQRankSum=4.563;ReadPosRankSum=2.222;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,11,0:0.344,0.000:32:9,5,0:12,6,0:43:78,0,50,385,751,1137:255,0,255:21,0:4.3095e+01,2.3479e-04,5.3000e+01,3.8543e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,3,8:11,10,7,4 chr1 33409694 . C . PASS END=33409729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1126:0,89,255:33,0 chr1 33409730 . A . PASS END=33409730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 33409731 . C . PASS END=33409732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 33409733 . T . PASS END=33409736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33409737 . C . PASS END=33409760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,71,255:26,0 chr1 33411115 . C . PASS END=33411229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:59:0,120,1800:0,140,255:40,0 chr1 33412003 . C . PASS END=33412013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr1 33412014 . C . PASS END=33412018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 33412019 . A . PASS END=33412019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,602:0,30,255:21,0 chr1 33412020 . C . PASS END=33412033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,870:0,69,255:26,0 chr1 33412034 . A . PASS END=33412035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 33412036 . C . PASS END=33412037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33412038 . T . PASS END=33412087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:36,0 chr1 33412088 . A . PASS END=33412088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:32,0 chr1 33412089 . T . PASS END=33412132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1133:0,80,255:35,0 chr1 33412133 . G . PASS END=33412159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,859:0,73,255:26,0 chr1 33412160 . G . PASS END=33412165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:18,0 chr1 33413823 . C . PASS END=33413843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1227:0,90,255:36,0 chr1 33413844 . A . PASS END=33413844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1158:0,78,255:35,0 chr1 33413845 . T . PASS END=33413967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,81,255:40,0 chr1 33415170 . C . PASS END=33415184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,647:0,54,255:19,0 chr1 33415185 . G . PASS END=33415196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr1 33415197 . G . PASS END=33415217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 33415218 . G . PASS END=33415218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 33415219 . A . PASS END=33415223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 33415224 . G . PASS END=33415228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1069:0,71,255:26,0 chr1 33415229 . G . PASS END=33415229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33415230 . T . PASS END=33415230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 33415231 . C . PASS END=33415232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 33415233 . G . PASS END=33415233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 33415234 . G . PASS END=33415240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:30,0 chr1 33415241 . T . PASS END=33415241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 33415242 . G . PASS END=33415257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1186:0,81,255:32,0 chr1 33415258 . G . PASS END=33415258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:30,0 chr1 33415259 . C . PASS END=33415289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1143:0,80,255:33,0 chr1 33415290 . A . PASS END=33415290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr1 33415291 . G . PASS END=33415313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 33415314 . A . PASS END=33415314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 33415315 . A . PASS END=33415321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 33415322 . C . PASS END=33415322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 33415323 . T . PASS END=33415323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33415324 . C . PASS END=33415324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 33415325 . T . PASS END=33415326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33415327 . A . PASS END=33415357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 33415358 . T . PASS END=33415374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:17,0 chr1 33415375 . A . PASS END=33415375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 33429652 . C . PASS END=33429663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 33429664 . G . PASS END=33429686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 33429687 . G . PASS END=33429687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 33429688 . T . PASS END=33429688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 33429689 . C . PASS END=33429689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 33429690 . C . PASS END=33429690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 33429691 . G . PASS END=33429697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:18,0 chr1 33429698 . G . PASS END=33429698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 33429699 . G . PASS END=33429719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,607:0,54,255:19,0 chr1 33429720 . C . PASS END=33429722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 33429723 . G . PASS END=33429723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33429724 . T . PASS END=33429766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 33429767 . C . PASS END=33429804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:19,0 chr1 33429805 . A . PASS END=33429805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 33429806 . T . PASS END=33429815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 33429816 . G . PASS END=33429820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 33429821 . C . PASS END=33429821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 33429822 . G . PASS END=33429824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 33429825 . T . PASS END=33429825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 33429826 . A . PASS END=33429831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 33429832 . A . PASS END=33429832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 33429833 . G . PASS END=33429834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 33429835 . C . PASS END=33429835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 33429836 . G . PASS END=33429836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:17,0 chr1 33429837 . C . PASS END=33429844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 33429845 . G . PASS END=33429845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 33429846 . G . PASS END=33429846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 33429847 . C . PASS END=33429856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:21,0 chr1 33429857 . C . PASS END=33429928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,568:0,48,255:19,0 chr1 33429929 . G . PASS END=33429932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,48,255:13,0 chr1 33429933 . C . PASS END=33429935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 33429936 . C . PASS END=33429949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr1 33429950 . C . PASS END=33429980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:20:9:0,20,315:0,20,255:9,0 chr1 33429981 . G . PASS END=33430008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 33430009 . G . PASS END=33430020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,241:6,0 chr1 33430021 . T G, 0.17 DRAGENSnpHardQUAL DP=6;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=-0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:5,1,0:0.167,0.000:6:2,0,0:3,1,0:14:21,0,50,36,179,215:21,0,154:4,0:1.6791e-01,1.4212e+01,6.7212e+01,4.9987e+01,2.2783e+02,2.3184e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,1,0:2,3,0,1 chr1 33430022 . C . PASS END=33430024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:4,0 chr1 33430025 . C . LowGQ END=33430066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,39:0,0,39:3,0 chr1 33430067 . C . LowDepth;LowGQ END=33430153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr1 33430154 . C . LowGQ END=33430167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,55:0,0,55:3,0 chr1 33430168 . G . PASS END=33430178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 33430179 . G . PASS END=33430180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 33430181 . G . PASS END=33430181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 33430182 . C . PASS END=33430189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 33430190 . G . PASS END=33430191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 33430192 . C . PASS END=33430193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 33430194 . C . LowGQ END=33430194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:7,0 chr1 33430195 . C . PASS END=33430195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 33430196 . G . PASS END=33430196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 33430197 . G . LowGQ END=33430208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:9:0,0,163:12,0,219:9,2 chr1 33430209 . G . PASS END=33430209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 33430210 . C . PASS END=33430231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 33430232 . C . PASS END=33430232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 33430233 . G . PASS END=33430238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 33430239 . A . PASS END=33430241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33430242 . T . PASS END=33430242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 33430243 . A . PASS END=33430244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 33430245 . C . PASS END=33430245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 33430246 . G . PASS END=33430248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 33430249 . G . PASS END=33430249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 33430250 . T . PASS END=33430253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 33430254 . G . PASS END=33430254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 33430255 . C . PASS END=33430266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 33430267 . G . PASS END=33430268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 33430269 . G . PASS END=33430269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 33430270 . T . PASS END=33430286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 33476430 . C . PASS END=33476434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 33476435 . C . PASS END=33476435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1668:0,70,255:40,0 chr1 33477719 . T . PASS END=33477723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:81:0,120,1800:0,244,255:40,0 chr1 33477990 . G . PASS END=33477990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 33478782 . T . PASS END=33478783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 33478784 . A . PASS END=33478784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 33478785 . G . PASS END=33478787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 33478788 . A . PASS END=33478788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 33478789 . A . PASS END=33478806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,785:0,66,255:26,0 chr1 33478807 . C . PASS END=33478811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 33478812 . G . PASS END=33478821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 33478822 . A . PASS END=33478823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr1 33478824 . G . PASS END=33478824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 33478825 . G . PASS END=33478829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1108:0,87,255:31,0 chr1 33478830 . T . PASS END=33478830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 33478831 . A . PASS END=33478831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 33478832 . G . PASS END=33478832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 33478833 . G . PASS END=33478887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:31:0,90,1127:0,93,255:39,0 chr1 33478888 . C . PASS END=33478888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1350:0,46,255:34,0 chr1 33478889 . C . PASS END=33478899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,105,1535:0,110,255:40,0 chr1 33478900 . T . PASS END=33478900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1468:0,77,255:38,0 chr1 33478901 . A . PASS END=33478919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1396:0,93,255:40,0 chr1 33478920 . G . PASS END=33478920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr1 33478921 . G . PASS END=33478928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:39:0,82,1427:0,82,255:37,0 chr1 33478929 . G . PASS END=33478929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:34,0 chr1 33478930 . T . PASS END=33478930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 33478931 . G . PASS END=33478931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr1 33478932 . G . PASS END=33478958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1274:0,91,255:35,0 chr1 33478959 . C . PASS END=33478959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1202:0,53,255:33,0 chr1 33478960 . T . PASS END=33478973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1197:0,86,255:34,0 chr1 33478974 . T . PASS END=33478974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr1 33478975 . G . PASS END=33478981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 33478982 . G . PASS END=33478982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:26,0 chr1 33478983 . G . PASS END=33478983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,909:0,32,255:25,0 chr1 33478984 . A . PASS END=33479001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:25,0 chr1 33479002 . A . PASS END=33479002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 33479003 . T . PASS END=33479003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 33480122 . C . PASS END=33480122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,625:0,46,255:20,0 chr1 33480123 . G . PASS END=33480137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,762:0,63,255:24,0 chr1 33480138 . C . PASS END=33480138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 33480139 . T . PASS END=33480157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,894:0,72,255:26,0 chr1 33480158 . C . PASS END=33480166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 33480167 . A . PASS END=33480168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 33480169 . G . PASS END=33480175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 33480176 . C . PASS END=33480184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,67,255:22,0 chr1 33480185 . G . PASS END=33480195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:18,0 chr1 33485577 . C . PASS END=33485640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:63:0,120,1800:0,151,255:40,0 chr1 33485699 . C . PASS END=33485739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:112:0,120,1800:0,255,255:40,0 chr1 33485740 . C . PASS END=33485762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:108:0,120,1800:0,228,255:40,2 chr1 33486968 . C . PASS END=33486995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:29:0,83,1078:0,83,255:36,0 chr1 33486996 . A . PASS END=33486996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:33,0 chr1 33486997 . G . PASS END=33487063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,105,1496:0,107,255:40,0 chr1 33487189 . C . PASS END=33487189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 33487194 . C . PASS END=33487304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:37:0,87,1395:0,87,255:40,0 chr1 33490043 . C . PASS END=33490059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:23,0 chr1 33490060 . T . PASS END=33490060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 33490061 . A . PASS END=33490078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:24,0 chr1 33490079 . T . PASS END=33490079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 33490080 . C . PASS END=33490094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr1 33490095 . G . PASS END=33490095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 33490096 . A . PASS END=33490096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 33490097 . A . PASS END=33490116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,964:0,81,255:30,0 chr1 33490117 . T . PASS END=33490160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:22,0 chr1 33490161 . C . PASS END=33490168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 33497227 . C . PASS END=33497262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,217,255:40,0 chr1 33502337 . C . PASS END=33502429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,100,1676:0,100,255:40,0 chr1 33547851 . A . PASS END=33547862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:25,0 chr1 33547863 . C . PASS END=33547863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:23,0 chr1 33547864 . T . PASS END=33547869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 33547870 . A . PASS END=33547871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 33547872 . T . PASS END=33547872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 33547873 . C . PASS END=33547876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr1 33547877 . C . PASS END=33547879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,867:0,73,255:29,0 chr1 33547880 . T . PASS END=33547908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1058:0,90,255:30,0 chr1 33547909 . G . PASS END=33547910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 33547911 . G . PASS END=33547918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 33547919 . G . PASS END=33547940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:22:0,63,945:0,64,255:26,0 chr1 33547941 . T . PASS END=33547941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 33547942 . C . PASS END=33547946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33547947 . G . PASS END=33547947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 33547948 . C . PASS END=33547948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33547949 . C . PASS END=33547955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 33548619 . T . PASS END=33548619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 33548620 . C . PASS END=33548620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 33548621 . A . PASS END=33548630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 33548631 . T . PASS END=33548632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 33548633 . T . PASS END=33548638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,986:0,78,255:26,0 chr1 33548639 . G . PASS END=33548641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33548642 . T . PASS END=33548642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 33548643 . T . PASS END=33548644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33548645 . C . PASS END=33548654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:27:0,74,1078:0,74,255:26,0 chr1 33549555 . G . PASS END=33549557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 33549558 . G . PASS END=33549558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 33549559 . A . PASS END=33549559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 33549560 . G . PASS END=33549675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1080:0,82,255:37,0 chr1 33549676 . G . PASS END=33549676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:26,0 chr1 33549677 . T . PASS END=33549679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:27,0 chr1 33549680 . G . PASS END=33549692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,71,255:26,0 chr1 33549693 . G . PASS END=33549693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 33549694 . C . PASS END=33549705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 33549706 . T . PASS END=33549728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 33557651 . G . PASS END=33557808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:38:0,90,1350:0,105,255:40,0 chr1 33557809 . C . PASS END=33557823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:25,0 chr1 33558883 . G . PASS END=33559008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:39:0,81,1215:0,113,255:40,0 chr1 33559009 . G . PASS END=33559009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 33559010 . G . PASS END=33559013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,114,255:27,0 chr1 33559014 . T . PASS END=33559017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:36:0,75,1125:0,92,255:26,0 chr1 33560149 . T . PASS END=33560152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 33560153 . C . PASS END=33560154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33560155 . C . PASS END=33560156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 33560157 . T . PASS END=33560157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr1 33560158 . T . PASS END=33560168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,791:0,66,255:23,0 chr1 33560169 . G . PASS END=33560218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1016:0,81,255:40,0 chr1 33560219 . T . PASS END=33560219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1192:0,64,255:36,0 chr1 33560220 . T . PASS END=33560300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:37:0,92,1252:0,92,255:40,0 chr1 33560301 . T . PASS END=33560314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1221:0,91,255:36,0 chr1 33562308 . A . PASS END=33562324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,675:0,41,255:22,0 chr1 33562325 . C . PASS END=33562334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,869:0,69,255:26,0 chr1 33562335 . G . PASS END=33562481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:28:0,81,1215:0,84,255:40,0 chr1 33563608 . C . PASS END=33563612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 33563613 . C . PASS END=33563831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:30:0,90,1103:0,90,255:40,0 chr1 33567434 . T . PASS END=33567480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:37:0,87,1267:0,87,255:40,0 chr1 33567481 . C . PASS END=33567481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1250:0,71,255:40,0 chr1 33567482 . A . PASS END=33567487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:84:45:0,84,1273:0,84,255:40,0 chr1 33567488 . G . PASS END=33567488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1372:0,69,255:36,0 chr1 33567489 . T . PASS END=33567493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,101,1320:0,101,255:39,0 chr1 33583503 . A . PASS END=33583509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 33583510 . C . PASS END=33583519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 33583520 . G . PASS END=33583520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 33583521 . C . PASS END=33583523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 33583524 . C . PASS END=33583526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:15,0 chr1 33583527 . T . PASS END=33583527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 33583528 . A . PASS END=33583559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:19,0 chr1 33583560 . G . PASS END=33583584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:22,0 chr1 33583585 . T . PASS END=33583585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 33583586 . G . PASS END=33583596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 33583597 . A . PASS END=33583597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr1 33583598 . A . PASS END=33583608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 33583609 . G . PASS END=33583609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 33583610 . G . PASS END=33583628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,845:0,69,255:23,0 chr1 33583629 . A . PASS END=33583629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:20,0 chr1 33583630 . A . PASS END=33583645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 33583646 . T . PASS END=33583648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:23:0,42,814:0,42,255:19,0 chr1 33583649 . G . PASS END=33583653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 33583654 . T . PASS END=33583699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,44,255:19,0 chr1 33583700 . C . PASS END=33583711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:13:0,31,495:0,31,255:12,0 chr1 33583712 . G . PASS END=33583712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 33583713 . G . PASS END=33583717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 33585645 . G . PASS END=33585783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:43:0,93,1440:0,93,255:40,0 chr1 33612778 . C . PASS END=33612778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 33612779 . T . PASS END=33612779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33612780 . A . PASS END=33612787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 33612788 . A . PASS END=33612790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 33612791 . G . PASS END=33612815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,970:0,78,255:26,0 chr1 33612816 . T . PASS END=33612817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 33612818 . T . PASS END=33612818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:26,0 chr1 33612819 . T . PASS END=33612827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:29,0 chr1 33612828 . C . PASS END=33612831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 33612832 . G . PASS END=33612932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1156:0,80,255:39,0 chr1 33612933 . C . PASS END=33612933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:30,0 chr1 33612934 . T . PASS END=33612971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1062:0,84,255:31,0 chr1 33612972 . T . PASS END=33612988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:25,0 chr1 33612989 . C . PASS END=33612989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:19,0 chr1 33612990 . G . PASS END=33612991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 33612992 . G . PASS END=33612993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 33612994 . C . PASS END=33613007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr1 33613008 . A . PASS END=33613036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 33613037 . A . PASS END=33613037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 33613038 . C . PASS END=33613041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 33613042 . G . PASS END=33613045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 33613046 . T . PASS END=33613092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,537:0,45,255:19,0 chr1 33613093 . G . PASS END=33613110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,815:0,63,255:24,0 chr1 33613111 . G . PASS END=33613111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 33613112 . A . PASS END=33613118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 33613119 . A . PASS END=33613119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 33613120 . C . PASS END=33613123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr1 33613124 . G . PASS END=33613124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 33613125 . T . PASS END=33613140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr1 33613141 . C . PASS END=33613141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 33613142 . A . PASS END=33613158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:24,0 chr1 33613159 . G . PASS END=33613159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,832:0,39,255:22,0 chr1 33613160 . C . PASS END=33613164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 33613165 . A . PASS END=33613170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 33613171 . G . PASS END=33613172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 33613173 . C . PASS END=33613174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33613175 . T . PASS END=33613179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 33613180 . A . PASS END=33613181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33613182 . C . PASS END=33613192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,986:0,67,255:25,0 chr1 33613193 . A . PASS END=33613193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,903:0,53,255:23,0 chr1 33613194 . C . PASS END=33613227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,906:0,62,255:26,0 chr1 33613228 . T . PASS END=33613228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 33613229 . G . PASS END=33613234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 33613235 . G . PASS END=33613235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 33613236 . G . PASS END=33613260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 33613261 . G . PASS END=33613261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:23,0 chr1 33613262 . G . PASS END=33613267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 33613268 . T . PASS END=33613268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 33613269 . C . PASS END=33613276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 33613277 . A . PASS END=33613277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 33613278 . G . PASS END=33613285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 33613286 . C . PASS END=33613286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 33613287 . G . PASS END=33613295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 33613296 . C . PASS END=33613296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 33613297 . T . PASS END=33613299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 33613300 . G . PASS END=33613301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 33613302 . C . PASS END=33613302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 33613303 . C . PASS END=33613303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:16,0 chr1 33613304 . G . PASS END=33613328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,627:0,40,255:17,0 chr1 33623854 . C . PASS END=33623969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1233:0,81,255:40,0 chr1 33625289 . C . PASS END=33625343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,615:0,45,255:18,0 chr1 33625344 . G . PASS END=33625344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 33625345 . C . PASS END=33625386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,568:0,48,255:19,0 chr1 33625387 . C . PASS END=33625396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 33625397 . T . PASS END=33625397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 33625398 . A . PASS END=33625405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33625406 . A . PASS END=33625406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 33625407 . C . PASS END=33625418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr1 33625419 . T . PASS END=33625419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 33625420 . G . PASS END=33625443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,876:0,62,255:25,0 chr1 33625444 . C . PASS END=33625452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 33625453 . C . PASS END=33625486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,846:0,64,255:26,0 chr1 33625487 . A . PASS END=33625487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 33625488 . G . PASS END=33625491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:26,0 chr1 33625492 . G . PASS END=33625497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 33625498 . C . PASS END=33625512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,74,255:26,0 chr1 33625513 . G . PASS END=33625513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 33625514 . C . PASS END=33625514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 33625515 . C . PASS END=33625533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 33625534 . C . PASS END=33625564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 33625565 . G . PASS END=33625574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 33626453 . G . PASS END=33626566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,102,1530:0,113,255:40,0 chr1 33629816 . T . PASS END=33629843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,682:0,54,255:19,0 chr1 33629844 . G . PASS END=33629860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr1 33629861 . G . PASS END=33629861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 33629862 . G . PASS END=33629879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:24,0 chr1 33629880 . A . PASS END=33629880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 33629881 . A . PASS END=33629884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 33629885 . T . PASS END=33629885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 33629886 . G . PASS END=33629886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 33629887 . T . PASS END=33629887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 33629888 . C . PASS END=33629936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,847:0,62,255:24,0 chr1 33629937 . T . PASS END=33629947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 33631072 . C . PASS END=33631076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 33631077 . T . PASS END=33631077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 33631078 . C . PASS END=33631078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr1 33631079 . T . PASS END=33631091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,778:0,63,255:24,0 chr1 33631092 . G . PASS END=33631092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 33631093 . C . PASS END=33631101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1000:0,75,255:26,0 chr1 33631102 . C . PASS END=33631104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 33631105 . C . PASS END=33631130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,853:0,62,255:26,0 chr1 33631131 . T . PASS END=33631167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,50,255:19,0 chr1 33642009 . C . PASS END=33642015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 33642016 . T . PASS END=33642016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 33642017 . G . PASS END=33642018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 33642019 . G . PASS END=33642034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,922:0,72,255:25,0 chr1 33642035 . C . PASS END=33642053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,969:0,81,255:28,0 chr1 33646626 . C . PASS END=33646640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 33646641 . G . PASS END=33646641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 33646642 . G . PASS END=33646646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr1 33646647 . G . PASS END=33646665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:22,0 chr1 33646666 . T . PASS END=33646666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 33646667 . G . PASS END=33646676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 33646677 . C . PASS END=33646677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,677:0,27,255:19,0 chr1 33646678 . A . PASS END=33646678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33646679 . G . PASS END=33646679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 33646680 . T . PASS END=33646685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:24,0 chr1 33646686 . C . PASS END=33646686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr1 33646687 . T . PASS END=33646691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,945:0,62,255:23,0 chr1 33646692 . G . PASS END=33646692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 33646693 . C . PASS END=33646695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 33646696 . A . PASS END=33646696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 33646697 . A . PASS END=33646697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 33646698 . G . PASS END=33646698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 33646699 . A . PASS END=33646700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:24,0 chr1 33646701 . G . PASS END=33646701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 33646702 . C . PASS END=33646702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 33646703 . A . PASS END=33646704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 33646705 . A . PASS END=33646706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 33646707 . A . PASS END=33646707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,648:0,38,255:22,0 chr1 33646708 . A . PASS END=33646714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 33646715 . G . PASS END=33646715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 33646716 . G . PASS END=33646724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:24,0 chr1 33646725 . G . PASS END=33646726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 33646727 . A . PASS END=33646729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 33646730 . A . PASS END=33646730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 33646731 . G . PASS END=33646731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 33646732 . A . PASS END=33646732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,703:0,36,255:20,0 chr1 33646733 . G . PASS END=33646733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 33646734 . C . PASS END=33646734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 33646735 . T . PASS END=33646735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 33646736 . T . PASS END=33646739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 33646740 . C . PASS END=33646751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,721:0,47,255:19,0 chr1 33646752 . C . PASS END=33646752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 33646753 . T . PASS END=33646753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:18,0 chr1 33646754 . G . PASS END=33646760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,648:0,60,255:20,0 chr1 33646761 . T . PASS END=33646762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 33646763 . G . PASS END=33646763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 33646764 . C . PASS END=33646772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 33646773 . G . PASS END=33646773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 33646774 . C . PASS END=33646832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 33646833 . C . PASS END=33646834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33646835 . T . PASS END=33646843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:18,0 chr1 33646844 . G . PASS END=33646844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 33646845 . C . PASS END=33646864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:18,0 chr1 33646865 . A . PASS END=33646865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 33646866 . C . PASS END=33646896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:19,0 chr1 33646897 . C . PASS END=33646905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 33646906 . T . PASS END=33646909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 33646910 . G . PASS END=33646911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33646912 . C . PASS END=33646912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 33646913 . G . PASS END=33646935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 33646936 . C . PASS END=33646936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr1 33646937 . G . PASS END=33646949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 33646950 . A G, 101.17 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,15,0:0,3,0:51:139,54,0,688,54,688:255,54,0:0,0:1.0117e+02,5.1172e+01,3.3134e-05,4.5000e+02,8.5942e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,10:0,0,7,11 chr1 33646951 . T . PASS END=33646951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 33646952 . G . PASS END=33646952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:14,0 chr1 33646953 . C . PASS END=33646966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 33646967 . T . PASS END=33646967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr1 33646968 . C . PASS END=33646969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 33646970 . C . PASS END=33646970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 33646971 . C . PASS END=33646987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,676:0,54,255:18,0 chr1 33646988 . T . PASS END=33646996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 33646997 . T . PASS END=33647010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:13,0 chr1 33647011 . T . PASS END=33647011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 33647012 . C . PASS END=33647012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 33647013 . G . PASS END=33647033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,304:0,27,255:9,0 chr1 33647595 . C . PASS END=33647604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,856:0,69,255:24,0 chr1 33647605 . T . PASS END=33647605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 33647606 . T . PASS END=33647633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,870:0,72,255:25,0 chr1 33647634 . C . PASS END=33647634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 33647635 . C . PASS END=33647652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,762:0,63,255:24,0 chr1 33647653 . C . PASS END=33647653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 33647654 . C . PASS END=33647655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 33647656 . A . PASS END=33647656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 33647657 . A . PASS END=33647666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 33647667 . C . PASS END=33647679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,684:0,46,255:19,0 chr1 33647680 . C . PASS END=33647693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr1 33647694 . C . PASS END=33647694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 33647695 . C . PASS END=33647705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,62,255:21,0 chr1 33647706 . C . PASS END=33647718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,46,255:16,0 chr1 33647719 . G . PASS END=33647719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 33647720 . C . PASS END=33647725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 33647726 . C . PASS END=33647726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,1 chr1 33647727 . A . PASS END=33647727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 33647728 . G . PASS END=33647728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33647729 . C . PASS END=33647743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,34,255:13,0 chr1 33647744 . C . LowGQ END=33647744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,374:10,0,255:11,0 chr1 33647745 . G . PASS END=33647745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33647746 . G . PASS END=33647746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:12,0 chr1 33647747 . G . PASS END=33647747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 33647748 . G . PASS END=33647749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 33647750 . C . PASS END=33647750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 33647751 . A . PASS END=33647751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:13,0 chr1 33647752 . C . PASS END=33647752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 33647753 . C . PASS END=33647753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 33647754 . A . PASS END=33647754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 33647755 . G . PASS END=33647755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,425:0,12,255:13,0 chr1 33647756 . C . PASS END=33647757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,470:0,45,255:15,0 chr1 33647758 . G . LowGQ END=33647758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:19,0,255:12,0 chr1 33647759 . G . PASS END=33647759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 33647760 . T . LowGQ END=33647760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,388:10,0,255:13,0 chr1 33647761 . T . PASS END=33647761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 33647762 . G . PASS END=33647762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,1 chr1 33647763 . A . PASS END=33647763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:11,0 chr1 33647764 . C . PASS END=33647764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:12,0 chr1 33647765 . C . PASS END=33647765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33647766 . C . PASS END=33647767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33647768 . G . LowGQ END=33647768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,435:29,0,255:12,0 chr1 33647769 . C . PASS END=33647772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33647773 . A . LowGQ END=33647773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,502:10,0,255:14,0 chr1 33647774 . C . PASS END=33647778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:17,0 chr1 33647779 . A . PASS END=33647780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 33647781 . C . PASS END=33647782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 33647783 . T . PASS END=33647783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:16,0 chr1 33647784 . C . PASS END=33647784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 33647785 . C . PASS END=33647785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 33647786 . T . PASS END=33647786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr1 33647787 . C . PASS END=33647787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 33647788 . C . PASS END=33647789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 33647790 . G . PASS END=33647790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,501:0,23,255:17,0 chr1 33647791 . C . PASS END=33647791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 33647792 . T . PASS END=33647792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:16,0 chr1 33647793 . C . PASS END=33647795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,652:0,54,255:18,0 chr1 33647796 . A . PASS END=33647796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 33647797 . G . PASS END=33647797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,529:0,2,255:16,0 chr1 33647798 . G . PASS END=33647799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:18,0 chr1 33647800 . A . PASS END=33647800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:15,0 chr1 33647801 . A . PASS END=33647806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:17,0 chr1 33647807 . G . PASS END=33647807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr1 33647808 . C . PASS END=33647813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:18,0 chr1 33647814 . T . PASS END=33647816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 33647817 . T . PASS END=33647820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 33647821 . T . PASS END=33647821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 33647822 . C . PASS END=33647822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33647823 . G . PASS END=33647840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 33647841 . T . PASS END=33647841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 33647842 . G . PASS END=33647845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 33736176 . A . PASS END=33736213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,123,255:40,0 chr1 33741701 . G . PASS END=33741723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 33741724 . A . PASS END=33741739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:12,0 chr1 33741740 . C . PASS END=33741764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 33741949 . C . PASS END=33741959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 33741960 . G . PASS END=33741964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 33741965 . T . PASS END=33741965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 33741966 . G . PASS END=33741970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 33741971 . A . PASS END=33741971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 33741972 . C . PASS END=33741990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 33741991 . A . PASS END=33741991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 33741992 . T . PASS END=33741999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr1 33742000 . A . PASS END=33742000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 33742001 . A . PASS END=33742014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 33742015 . C . PASS END=33742015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 33742016 . A . PASS END=33742020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr1 33742021 . C . PASS END=33742025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 33742026 . C . PASS END=33742042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 33742043 . A . PASS END=33742043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 33742044 . G . PASS END=33742044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33742045 . C . PASS END=33742071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 33742072 . G . PASS END=33742077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 33742078 . A . PASS END=33742096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 33742097 . C . PASS END=33742165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr1 33742166 . A . PASS END=33742173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,125:3,0 chr1 33742174 . C . PASS END=33742179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:4,0 chr1 33742180 . A . LowGQ END=33742180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:27,0,82:3,0 chr1 33742181 . C . PASS END=33742181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 33742182 . C . LowGQ END=33742182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:19,0,96:3,0 chr1 33742183 . A . PASS END=33742186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 33742187 . C . PASS END=33742190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:2,0 chr1 33742191 . C . PASS END=33742195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:2,0 chr1 33745725 . G . PASS END=33745760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:24,0 chr1 33745761 . C . PASS END=33745838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1155:0,80,255:35,0 chr1 33745839 . G . PASS END=33745839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 33745840 . C . PASS END=33745846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 33745847 . G . PASS END=33745847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 33745848 . C . PASS END=33745849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 33745850 . T . PASS END=33745850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 33745851 . C . PASS END=33745851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 33745852 . G . PASS END=33745869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,945:0,62,255:26,0 chr1 33745870 . A . PASS END=33745870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:20,0 chr1 33745871 . G . PASS END=33745872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:21,0 chr1 33745873 . G . PASS END=33745873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:20,0 chr1 33745874 . A . PASS END=33745875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 33745876 . C . PASS END=33745876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 33745877 . A . PASS END=33745877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 33745878 . C . PASS END=33745878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:19,0 chr1 33745879 . C . PASS END=33745879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 33745880 . A . PASS END=33745885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:21,0 chr1 33745886 . C . PASS END=33745899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:16:0,42,630:0,46,255:15,0 chr1 33745900 . C . PASS END=33745900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:11,0 chr1 33745901 . A . PASS END=33745901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33745902 . T . PASS END=33745903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:12,0 chr1 33745904 . A . PASS END=33745905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,527:0,31,255:12,0 chr1 33745906 . G . PASS END=33745906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,449:0,15,255:11,0 chr1 33745907 . A . PASS END=33745907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:16:0,30,450:0,32,255:10,0 chr1 33745908 . C . PASS END=33745908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:9,0 chr1 33745909 . A . PASS END=33745911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:10,0 chr1 33745912 . C . PASS END=33745912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:9,0 chr1 33745913 . C . PASS END=33745913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 33745914 . A . PASS END=33745914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,419:0,11,255:9,0 chr1 33745915 . G . PASS END=33745916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 33745917 . G . PASS END=33745918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 33745919 . C . PASS END=33745920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 33745921 . C . PASS END=33745922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 33745923 . G . PASS END=33745923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:10,0 chr1 33745924 . C . PASS END=33745924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 33745925 . C . PASS END=33745925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:10,0 chr1 33745926 . T . PASS END=33745927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 33745928 . C . LowGQ END=33745928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,294:0,0,255:9,0 chr1 33745929 . T . PASS END=33745938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 33745939 . C . PASS END=33745940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:9,0 chr1 33745941 . A . PASS END=33745941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,341:0,6,255:10,0 chr1 33745942 . G . PASS END=33745945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 33745946 . G . PASS END=33745946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:11,0 chr1 33745947 . A . PASS END=33745947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,390:0,8,255:11,0 chr1 33745948 . A . PASS END=33745949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 33745950 . G . PASS END=33745950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr1 33745951 . C . PASS END=33745951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33745952 . G . PASS END=33745952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,343:0,5,255:10,0 chr1 33745953 . G . PASS END=33745953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:11,0 chr1 33745954 . C . PASS END=33745955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33745956 . G . PASS END=33745957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 33745958 . A . PASS END=33745958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33745959 . A . PASS END=33745959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 33745960 . A . PASS END=33745967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,366:0,36,255:12,0 chr1 33745968 . A . PASS END=33745968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,305:0,19,255:11,0 chr1 33745969 . G . PASS END=33745969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 33745970 . G . PASS END=33745973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 33745974 . A . PASS END=33745974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 33745975 . G . PASS END=33745979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33745980 . C . LowGQ END=33745980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,335:3,0,255:10,0 chr1 33745981 . G . PASS END=33745984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33745985 . G . LowGQ END=33745985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,343:3,0,255:10,0 chr1 33745986 . G . PASS END=33745988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr1 33745989 . C . PASS END=33745989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 33745990 . G . PASS END=33745992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,337:0,33,255:11,0 chr1 33745993 . T . PASS END=33745998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 33745999 . T . PASS END=33745999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 33746000 . G . PASS END=33746005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr1 33746006 . C . PASS END=33746006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 33746007 . C . PASS END=33746021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 33746022 . C . PASS END=33746022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 33746023 . C . PASS END=33746024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 33746025 . C . PASS END=33746025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 33746026 . G . PASS END=33746026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 33746027 . G . PASS END=33746028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 33746029 . C . PASS END=33746030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 33746031 . A . PASS END=33746031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 33746032 . G . PASS END=33746033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 33746034 . C . PASS END=33746037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,270:0,13,255:6,0 chr1 33746038 . C . PASS END=33746038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 33746039 . A . PASS END=33746039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 33746040 . A . LowGQ END=33746040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,211:12,0,223:7,0 chr1 33746041 . G . PASS END=33746041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 33746042 . G . PASS END=33746044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 33746045 . G . PASS END=33746046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 33746047 . C . PASS END=33746047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 33746048 . A . PASS END=33746048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 33746049 . A . PASS END=33746049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 33746050 . G . PASS END=33746051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,221:6,0 chr1 33746052 . C . PASS END=33746053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 33746054 . T . PASS END=33746056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 33746057 . A . LowGQ END=33746058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:0,0,239:5,0 chr1 33747188 . G . PASS END=33747210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:23,0 chr1 33747211 . T . PASS END=33747211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 33747212 . T . PASS END=33747212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 33747213 . T . PASS END=33747213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 33747214 . T . PASS END=33747220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 33747221 . G . PASS END=33747221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 33747222 . T . PASS END=33747258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:24,0 chr1 33747259 . C . PASS END=33747262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr1 33747263 . G . PASS END=33747267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 33747268 . A . PASS END=33747269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 33747270 . A . PASS END=33747270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 33747271 . A . PASS END=33747272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 33747273 . T . PASS END=33747298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,900:0,62,255:25,0 chr1 33747299 . C . PASS END=33747299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 33747300 . A . PASS END=33747326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr1 33747327 . C . PASS END=33747327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 33747328 . G . PASS END=33747334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 33747335 . C . PASS END=33747335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 33747336 . C . PASS END=33747336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 33747337 . T . PASS END=33747337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 33747338 . G . PASS END=33747342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33747343 . T . PASS END=33747398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,668:0,43,255:19,0 chr1 33747399 . C . PASS END=33747399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 33747400 . A . PASS END=33747408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 33747409 . C . PASS END=33747412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:14,0 chr1 33760538 . A . PASS END=33760616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1305:0,101,255:40,0 chr1 33760748 . T . PASS END=33760780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,99,1577:0,99,255:40,0 chr1 33760781 . T . PASS END=33760879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:34:0,90,1350:0,102,255:40,0 chr1 33760880 . A . PASS END=33760880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 33760881 . G . PASS END=33760890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1194:0,83,255:29,0 chr1 33760891 . G . PASS END=33760898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:24,0 chr1 33760899 . A . PASS END=33760906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:20:0,57,855:0,60,255:19,0 chr1 33764531 . G . PASS END=33764541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:26,0 chr1 33764542 . G . PASS END=33764545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 33764546 . A . PASS END=33764546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 33764547 . A . PASS END=33764548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 33764549 . C . PASS END=33764560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:27,0 chr1 33764561 . C . PASS END=33764617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1086:0,80,255:36,0 chr1 33764618 . G . PASS END=33764624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 33764625 . C . PASS END=33764628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33764629 . G . PASS END=33764630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 33764631 . G . PASS END=33764632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33764633 . A . PASS END=33764633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:26,0 chr1 33764634 . T . PASS END=33764635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33764636 . T . PASS END=33764647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:26,0 chr1 33772367 . C . PASS END=33772372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr1 33772373 . C . PASS END=33772373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 33772374 . C . PASS END=33772377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:17,0 chr1 33772378 . G . PASS END=33772378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:15,0 chr1 33772379 . C . PASS END=33772379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 33772380 . A . PASS END=33772380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 33772381 . G . PASS END=33772408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,613:0,40,255:19,0 chr1 33772409 . T . PASS END=33772409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:13,0 chr1 33772410 . C . PASS END=33772411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 33772412 . C . LowGQ END=33772412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,396:21,0,255:11,0 chr1 33772413 . G . PASS END=33772415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33772416 . C . PASS END=33772416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:13,0 chr1 33772417 . G . PASS END=33772418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33772419 . C . PASS END=33772419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,451:0,18,255:15,0 chr1 33772420 . G . PASS END=33772420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:16,0 chr1 33772421 . G . PASS END=33772421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:17:17:0,17,377:0,17,255:15,0 chr1 33772422 . A . PASS END=33772424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,534:0,54,255:18,0 chr1 33772425 . T . PASS END=33772431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,603:0,60,255:20,0 chr1 33772432 . G . PASS END=33772432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,613:0,43,255:19,0 chr1 33772433 . C . PASS END=33772433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,537:0,27,255:18,0 chr1 33772434 . G . PASS END=33772435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 33772436 . G . PASS END=33772436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,588:0,13,255:17,0 chr1 33772437 . C . PASS END=33772438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33772439 . G . PASS END=33772440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,573:0,46,255:20,0 chr1 33772441 . T . PASS END=33772441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,609:0,29,255:19,0 chr1 33772442 . G . PASS END=33772445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 33772446 . G . PASS END=33772446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 33772447 . G . PASS END=33772450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 33772451 . C . PASS END=33772465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,652:0,41,255:19,0 chr1 33772466 . C . PASS END=33772468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 33772469 . C . PASS END=33772472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 33772473 . A . PASS END=33772473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33772474 . C . PASS END=33772475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 33772476 . T . PASS END=33772476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:18,0 chr1 33772477 . T . PASS END=33772481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 33772482 . G . PASS END=33772484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33772485 . T . PASS END=33772495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 33772496 . G . PASS END=33772506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 33772507 . T . PASS END=33772507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 33772508 . G . PASS END=33772509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 33772510 . G . PASS END=33772549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:19,0 chr1 33772550 . G . PASS END=33772552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33772553 . G . PASS END=33772554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33772555 . C . PASS END=33772564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 33772565 . G . PASS END=33772584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:8:0,21,315:0,24,255:8,0 chr1 33772585 . T . PASS END=33772588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 33772589 . C . PASS END=33772604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 33772605 . A . PASS END=33772610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 33772611 . C . PASS END=33772618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 33772619 . C . PASS END=33772619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 33772620 . A . PASS END=33772641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 33772642 . C . PASS END=33772682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 33772683 . C . PASS END=33772690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 33772691 . G . PASS END=33772691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 33772692 . G . PASS END=33772702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 33772703 . C . PASS END=33772705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 33772706 . C . PASS END=33772726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 33772727 . G . PASS END=33772727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 33772728 . T . PASS END=33772751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 33772752 . A . PASS END=33772761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr1 33772762 . G . PASS END=33772783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 33772784 . C . PASS END=33772827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:6,0 chr1 33772828 . G . PASS END=33772839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 33772840 . G . PASS END=33772880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 33772881 . T . PASS END=33772897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 33772898 . C . PASS END=33772915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 33772916 . C . PASS END=33772952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:9,0 chr1 33772953 . G . PASS END=33772964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 33772965 . T . PASS END=33772973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 33772974 . A . PASS END=33772977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 33772978 . A . PASS END=33772987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 33772988 . G . PASS END=33772997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 33772998 . G . PASS END=33772998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 33772999 . C . PASS END=33773008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 33773009 . C . PASS END=33773009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 33773010 . T . PASS END=33773019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 33773020 . T . PASS END=33773041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,296:0,27,255:9,0 chr1 33773042 . C . PASS END=33773047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 33773048 . C . PASS END=33773054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:6:0,9,135:0,18,225:3,0 chr1 33777653 . C . PASS END=33777655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 33777656 . C . PASS END=33777656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 33777657 . C . PASS END=33777756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:30:0,87,1125:0,87,255:40,0 chr1 33777757 . C . PASS END=33777763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 33777764 . G . PASS END=33777764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 33777765 . T . PASS END=33777770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:31:0,68,1125:0,68,255:26,0 chr1 33777771 . T . PASS END=33777780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 33777781 . A . PASS END=33777789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr1 33777790 . C . PASS END=33777790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:21,0 chr1 33778102 . C . PASS END=33778125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 33778126 . T . PASS END=33778134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 33778135 . A . PASS END=33778162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 33778163 . C . PASS END=33778163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 33778164 . G . PASS END=33778178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr1 33778179 . G . PASS END=33778180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 33778181 . C . PASS END=33778185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33778186 . A . PASS END=33778188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 33778189 . T . PASS END=33778191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 33778408 . C . PASS END=33778444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,620:0,48,255:18,0 chr1 33778445 . G . PASS END=33778445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 33778446 . G . PASS END=33778485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:18,0 chr1 33778486 . C . PASS END=33778491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 33786677 . C . PASS END=33786693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1288:0,102,255:35,0 chr1 33786694 . A . PASS END=33786694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1020:0,71,255:33,0 chr1 33786695 . G . PASS END=33786699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1341:0,105,255:35,0 chr1 33790466 . C . PASS END=33790467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 33790468 . A . PASS END=33790468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:29,0 chr1 33790469 . G . PASS END=33790546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:31:0,82,1241:0,82,255:40,0 chr1 33790547 . G . PASS END=33790547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:70:47:0,70,1626:0,70,255:40,0 chr1 33790548 . T . PASS END=33790598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:40:0,93,1468:0,93,255:40,0 chr1 33790599 . T . PASS END=33790599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:33,0 chr1 33790600 . C . PASS END=33790613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1209:0,86,255:31,0 chr1 33790614 . T . PASS END=33790620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,71,255:26,0 chr1 33792985 . T . PASS END=33793028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,140,255:40,0 chr1 33794471 . C . PASS END=33794497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,537:0,44,255:19,0 chr1 33794498 . C . PASS END=33794502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,845:0,63,255:22,0 chr1 33794503 . T . PASS END=33794503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 33794504 . C . PASS END=33794525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:24,0 chr1 33794526 . A . PASS END=33794526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 33794527 . C . PASS END=33794527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 33794528 . T . PASS END=33794528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 33794529 . T . PASS END=33794557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,978:0,75,255:26,0 chr1 33794558 . G . PASS END=33794600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1094:0,80,255:31,0 chr1 33794601 . T . PASS END=33794601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 33794602 . T . PASS END=33794607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 33794608 . C . PASS END=33794614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 33794615 . A . PASS END=33794615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33794616 . A . PASS END=33794616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1062:0,60,255:26,0 chr1 33794617 . G . PASS END=33794618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33794619 . A . PASS END=33794619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 33794620 . G . PASS END=33794643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 33794644 . A . PASS END=33794644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 33794645 . A . PASS END=33794651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 33794652 . C . PASS END=33794652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 33794653 . T . PASS END=33794654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33794655 . A . PASS END=33794684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:26,0 chr1 33794685 . G . PASS END=33794708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 33794709 . C . PASS END=33794709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 33794710 . A . PASS END=33794711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33794712 . A . PASS END=33794712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:13,0 chr1 33794713 . G . PASS END=33794714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33794715 . A . PASS END=33794715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 33794716 . G . PASS END=33794717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33794718 . A . PASS END=33794718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 33794719 . G . PASS END=33794719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33794720 . T . PASS END=33794720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr1 33794721 . A . PASS END=33794721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 33794722 . A . PASS END=33794727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 33794728 . A . PASS END=33794737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 33794738 . T . PASS END=33794738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 33794739 . G . PASS END=33794747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 33795672 . C . PASS END=33795792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:44:0,115,1477:0,115,255:40,0 chr1 33795793 . T . PASS END=33795793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1455:0,68,255:35,0 chr1 33795794 . T . PASS END=33795813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:36:0,81,1215:0,93,255:37,0 chr1 33796949 . C . PASS END=33797063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,115,1755:0,115,255:40,0 chr1 33797239 . T . PASS END=33797300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,88,255:38,0 chr1 33797876 . C . PASS END=33798005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:42:0,90,1440:0,90,255:40,2 chr1 33799691 . C . PASS END=33799694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 33799695 . A . PASS END=33799695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 33799696 . A . PASS END=33799696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 33799697 . A . PASS END=33799697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 33799698 . G . PASS END=33799698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 33799699 . G . PASS END=33799701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33799702 . C . PASS END=33799703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 33799704 . G . PASS END=33799706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:31,1 chr1 33799707 . C . PASS END=33799787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:32:0,88,1174:0,88,255:40,0 chr1 33799788 . T . PASS END=33799788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:37,0 chr1 33799789 . T . PASS END=33799834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1288:0,92,255:40,0 chr1 33799835 . T . PASS END=33799835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1108:0,41,255:27,0 chr1 33799836 . G . PASS END=33799846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 33799847 . G . PASS END=33799850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 33799851 . C . PASS END=33799865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1172:0,93,255:31,0 chr1 33799866 . A . PASS END=33799884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:17:0,42,630:0,51,255:18,0 chr1 33799885 . G . PASS END=33799885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33799886 . C . PASS END=33799887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 33799888 . C . PASS END=33799893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33800866 . T . PASS END=33800866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 33800867 . C . PASS END=33800867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 33800868 . A . PASS END=33800880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1044:0,82,255:34,0 chr1 33800881 . T . PASS END=33800881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1110:0,63,255:33,0 chr1 33800882 . C . PASS END=33800928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1313:0,87,255:40,0 chr1 33800929 . G . PASS END=33800929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr1 33800930 . T . PASS END=33800956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1158:0,80,255:30,0 chr1 33800957 . C . PASS END=33800960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33809447 . T . PASS END=33809474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,120,255:40,0 chr1 33809475 . A . PASS END=33809508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,120,255:40,0 chr1 33819024 . T . PASS END=33819040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:76:0,120,1800:0,215,255:40,0 chr1 33820002 . C . PASS END=33820167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:94:37:0,94,1388:0,94,255:40,0 chr1 33820439 . C . PASS END=33820458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:19,0 chr1 33820459 . G . PASS END=33820460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,735:0,60,255:20,0 chr1 33820461 . T . PASS END=33820461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 33820462 . G . PASS END=33820462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 33820463 . T . PASS END=33820463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 33820464 . A . PASS END=33820466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:22,0 chr1 33820467 . A . PASS END=33820467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 33820468 . T . PASS END=33820487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,681:0,62,255:26,0 chr1 33820488 . A . PASS END=33820488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,840:0,39,255:24,0 chr1 33820489 . A . PASS END=33820508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr1 33820509 . G . PASS END=33820509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 33820510 . G . PASS END=33820523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 33820524 . T . PASS END=33820524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 33820525 . G . PASS END=33820528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33820529 . A . PASS END=33820535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 33820536 . G . PASS END=33820537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33820538 . C . PASS END=33820538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 33820539 . C . PASS END=33820539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33820540 . C . PASS END=33820616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:19,0 chr1 33820617 . A . PASS END=33820617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 33820618 . G . PASS END=33820651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:16,0 chr1 33820652 . G . PASS END=33820653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33820654 . C . PASS END=33820727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,615:0,41,255:19,0 chr1 33820728 . G . PASS END=33820738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:23,0 chr1 33820739 . C . PASS END=33820739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 33820740 . T . PASS END=33820750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 33820751 . C . PASS END=33820751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 33820752 . T . PASS END=33820787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,717:0,63,255:22,0 chr1 33820788 . A . PASS END=33820789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,646:0,49,255:21,0 chr1 33820790 . T . PASS END=33820792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 33820793 . G . PASS END=33820826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,50,255:19,0 chr1 33820827 . A . PASS END=33820854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 33832717 . C . PASS END=33832717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 33832718 . T . PASS END=33832718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 33832719 . G . PASS END=33832723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 33832724 . A . PASS END=33832725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 33832726 . T . PASS END=33832726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33832727 . G . PASS END=33832727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 33832728 . A . PASS END=33832741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr1 33832742 . C . PASS END=33832742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 33832743 . A . PASS END=33832752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33832753 . C . PASS END=33832755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 33832756 . T . PASS END=33832756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33832757 . C . PASS END=33832759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 33832760 . G . PASS END=33832760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 33832761 . C . PASS END=33832827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 33832828 . C . PASS END=33832864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,668:0,51,255:18,0 chr1 33832865 . A G, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.532;ReadPosRankSum=0.442;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,9,0:0.500,0.000:18:4,4,0:5,5,0:48:85,0,50,322,322,644:255,0,255:9,0:5.0000e+01,6.5233e-05,5.3000e+01,3.2196e+02,3.5666e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,5,4:6,3,6,3 chr1 33832866 . G . PASS END=33832875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 33832876 . G . PASS END=33832876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 33832877 . A . PASS END=33832888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:26,0 chr1 33832889 . G . PASS END=33832891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 33832892 . C . PASS END=33832893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33832894 . G . PASS END=33832902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:34,0 chr1 33832903 . T . PASS END=33833017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1203:0,84,255:40,0 chr1 33833018 . C . PASS END=33833018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 33833019 . A . PASS END=33833019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 33833020 . A . PASS END=33833020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1004:0,57,255:26,0 chr1 33833021 . G . PASS END=33833023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 33833024 . C . PASS END=33833029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1063:0,63,255:25,0 chr1 33834137 . C . PASS END=33834137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,739:0,20,255:21,0 chr1 33834138 . T . PASS END=33834139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,756:0,44,255:22,0 chr1 33834140 . G . PASS END=33834147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 33834148 . T . PASS END=33834148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,726:0,44,255:21,0 chr1 33834149 . G . PASS END=33834153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 33834154 . G . PASS END=33834154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:24,0 chr1 33834155 . C . PASS END=33834156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,858:0,75,255:25,0 chr1 33834157 . G . PASS END=33834159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 33834160 . C . PASS END=33834160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,842:0,53,255:27,0 chr1 33834161 . G . PASS END=33834168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 33834169 . C . PASS END=33834169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 33834170 . A . PASS END=33834179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:31,0 chr1 33834180 . T . PASS END=33834180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1074:0,65,255:30,0 chr1 33834181 . C . PASS END=33834181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 33834182 . A . PASS END=33834182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1062:0,44,255:31,0 chr1 33834183 . G . PASS END=33834183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 33834184 . G . PASS END=33834184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:32,0 chr1 33834185 . C . PASS END=33834188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 33834189 . A . PASS END=33834189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:32,0 chr1 33834190 . C . PASS END=33834190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1250:0,91,255:32,0 chr1 33834191 . A . PASS END=33834191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr1 33834192 . G . PASS END=33834208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,99,1485:0,102,255:35,0 chr1 33834209 . G . PASS END=33834209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 33834210 . G . PASS END=33834271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1080:0,87,255:35,0 chr1 33834272 . C . PASS END=33834278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,79,255:26,0 chr1 33834279 . C . PASS END=33834289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr1 33836022 . C . PASS END=33836036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:16:0,47,612:0,47,255:20,0 chr1 33836037 . A . PASS END=33836043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,760:0,63,255:23,0 chr1 33836044 . T . PASS END=33836044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr1 33836045 . G . PASS END=33836064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:26,0 chr1 33836065 . G . PASS END=33836143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,975:0,80,255:31,0 chr1 33836144 . G . PASS END=33836162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 33836163 . T . PASS END=33836163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 33836164 . G . PASS END=33836181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 33836182 . T . PASS END=33836183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 33836184 . G . PASS END=33836185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33836186 . T . PASS END=33836186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 33836618 . C . PASS END=33836695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:32:0,96,1218:0,96,255:40,0 chr1 33837890 . C . PASS END=33837895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 33837896 . T . PASS END=33837897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 33837898 . C . PASS END=33837910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,44,255:18,0 chr1 33837911 . C . PASS END=33837942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:24,0 chr1 33837943 . G . PASS END=33837943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 33837944 . G . PASS END=33837955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,986:0,72,255:26,0 chr1 33837956 . C . PASS END=33837958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 33837959 . C . PASS END=33837960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33837961 . G . PASS END=33837977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 33837978 . T . PASS END=33837983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 33837984 . G . PASS END=33837993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1096:0,87,255:30,0 chr1 33837994 . G . PASS END=33837999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 33838000 . G . PASS END=33838001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 33838002 . T . PASS END=33838030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr1 33838031 . C . PASS END=33838031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 33838032 . A . PASS END=33838045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 33838046 . C . PASS END=33838047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 33838048 . C . PASS END=33838048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 33840967 . C . PASS END=33840981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 33840982 . G . PASS END=33840993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,737:0,60,255:26,0 chr1 33840994 . A . PASS END=33841004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,988:0,84,255:30,0 chr1 33841005 . A . PASS END=33841005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 33841006 . A . PASS END=33841111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1081:0,80,255:34,0 chr1 33841112 . G . PASS END=33841118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 33841119 . G . PASS END=33841125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:27,0 chr1 33841126 . C . PASS END=33841138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr1 33841139 . A . PASS END=33841140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 33944890 . A . PASS END=33944891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 33944892 . G . PASS END=33944905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 33944906 . A . PASS END=33944906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 33944907 . A . PASS END=33944926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 33944927 . C . PASS END=33944927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 33944928 . G . PASS END=33944932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33944933 . C . PASS END=33944945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 33944946 . A . PASS END=33944958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 33944959 . A . PASS END=33944959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 33944960 . A . PASS END=33944962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33944963 . T . PASS END=33944963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33944964 . G . PASS END=33944965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33944966 . A . PASS END=33944982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,443:0,39,255:13,0 chr1 33944983 . T . PASS END=33944985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 33944986 . G . PASS END=33944993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 33944994 . A . PASS END=33944994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,368:0,25,255:12,0 chr1 33944995 . C . PASS END=33945013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 33945014 . G . PASS END=33945014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 33945015 . C . PASS END=33945029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,405:0,36,255:13,0 chr1 33945030 . A . PASS END=33945039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:23:12:0,23,360:0,23,255:9,0 chr1 33945040 . C . PASS END=33945040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 33945041 . G . PASS END=33945041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 33945042 . C . PASS END=33945043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 33945044 . A . PASS END=33945054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 33945055 . C . PASS END=33945070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:12,0 chr1 33945071 . A . PASS END=33945071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 33945072 . T . PASS END=33945082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 33945083 . C . PASS END=33945083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 33945084 . C . PASS END=33945119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:12,0 chr1 33945120 . T . PASS END=33945120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 33945121 . C . PASS END=33945132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 33945133 . C . PASS END=33945133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 33945134 . C . PASS END=33945143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 33945144 . T . PASS END=33945144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 33945145 . C . PASS END=33945151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 33945152 . A . PASS END=33945152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 33945153 . G . PASS END=33945154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 33945155 . A . PASS END=33945157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 33945158 . T . PASS END=33945158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 33945159 . C . PASS END=33945172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,435:0,36,255:12,0 chr1 33945173 . T . PASS END=33945191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 33945192 . T A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.366;ReadPosRankSum=0.428;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,8,0:0.533,0.000:15:2,3,0:5,5,0:48:85,0,50,257,250,508:243,0,204:7,0:5.0000e+01,6.5751e-05,5.2910e+01,2.5731e+02,2.8516e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,3,5:4,3,4,4 chr1 33945193 . A . PASS END=33945194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 33945195 . C . PASS END=33945200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 33945201 . T . PASS END=33945201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr1 33945202 . A . PASS END=33945207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 33945208 . G . PASS END=33945209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 33945210 . C . PASS END=33945210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 33945211 . C . PASS END=33945211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 33945212 . A . PASS END=33945212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 33945213 . G . PASS END=33945218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 33945219 . G . PASS END=33945219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 33945220 . G . PASS END=33945223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:18,0 chr1 33945224 . A . PASS END=33945224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 33945225 . G . PASS END=33945229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,625:0,54,255:19,0 chr1 33945230 . G . PASS END=33945262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,607:0,40,255:19,0 chr1 33945263 . T . PASS END=33945263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 33945264 . G . PASS END=33945265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 33945266 . T . PASS END=33945268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 33945269 . A . PASS END=33945272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 33945273 . T . PASS END=33945273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:16,0 chr1 33945274 . T . PASS END=33945283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:18,0 chr1 33945284 . A . PASS END=33945284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:15,0 chr1 33945285 . G . PASS END=33945300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 33945301 . C . PASS END=33945306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 33954065 . G . PASS END=33954070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 33954071 . G . PASS END=33954149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1008:0,81,255:36,0 chr1 33954150 . G . PASS END=33954150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 33954151 . G . PASS END=33954194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,86,255:35,0 chr1 33954195 . C . PASS END=33954203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:28:0,78,1170:0,84,255:26,0 chr1 33954204 . C . PASS END=33954207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 33954208 . T . PASS END=33954216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 33954217 . T . PASS END=33954217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:21,0 chr1 33954218 . G . PASS END=33954231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,68,255:23,0 chr1 33954232 . A . PASS END=33954232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 33954233 . C . PASS END=33954251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,825:0,72,255:24,0 chr1 33954715 . C . PASS END=33954767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,592:0,44,255:19,0 chr1 33954768 . T . PASS END=33954782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 33954783 . G . PASS END=33954791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 33955118 . G . PASS END=33955170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1305:0,93,255:40,0 chr1 33955171 . A . PASS END=33955171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:33,0 chr1 33955172 . G . PASS END=33955173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1324:0,92,255:33,0 chr1 33955174 . A . PASS END=33955174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr1 33955175 . G . PASS END=33955191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:33,0 chr1 33955192 . C . PASS END=33955202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr1 33956625 . G . PASS END=33956637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1279:0,89,255:35,0 chr1 33956638 . A . PASS END=33956638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr1 33956639 . A . PASS END=33956770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1241:0,89,255:40,0 chr1 33956771 . T . PASS END=33956771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:33,0 chr1 33956772 . C . PASS END=33956823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,82,255:35,0 chr1 33956824 . A . PASS END=33956824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 33956825 . G . PASS END=33956826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 33956827 . T . PASS END=33956827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 33956828 . G . PASS END=33956865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1072:0,80,255:31,0 chr1 33956866 . A . PASS END=33956866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 33956867 . A . PASS END=33956885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1082:0,92,255:32,0 chr1 33956886 . T . PASS END=33956886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,991:0,79,255:30,0 chr1 33956887 . C . PASS END=33956936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1209:0,86,255:33,0 chr1 33956937 . T . PASS END=33956937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr1 33956938 . T . PASS END=33957017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:39,0 chr1 33957018 . A . PASS END=33957018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:35,0 chr1 33957019 . C . PASS END=33957026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1336:0,111,255:37,0 chr1 33957027 . C . PASS END=33957027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:36,0 chr1 33957028 . C . PASS END=33957080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1151:0,83,255:37,0 chr1 33957081 . T . PASS END=33957081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 33957082 . G . PASS END=33957114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:33:0,85,1172:0,85,255:33,0 chr1 33957115 . T . PASS END=33957115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 33957116 . G . PASS END=33957151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,103,255:40,0 chr1 33957152 . T G, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,20,0:0,21,0:120:208,123,0,1581,123,1581:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,19:0,0,25,16 chr1 33957153 . A . PASS END=33957189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,101,1402:0,101,255:40,0 chr1 33957190 . C . PASS END=33957296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,101,1356:0,101,255:40,0 chr1 33957297 . G . PASS END=33957297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:35,0 chr1 33957298 . T . PASS END=33957322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:34:0,95,1203:0,95,255:36,0 chr1 33958787 . C . PASS END=33958787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 33958788 . A . PASS END=33958788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 33958789 . G . PASS END=33958814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,90,255:39,0 chr1 33958815 . C . PASS END=33958815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 33958816 . A . PASS END=33959199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1215:0,82,255:40,0 chr1 33959200 . A . PASS END=33959204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 33959205 . C . PASS END=33959205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 33959206 . C . PASS END=33959215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 33959818 . G . PASS END=33960024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,113,1565:0,113,255:40,0 chr1 33960025 . T . PASS END=33960061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,110,1800:0,110,255:40,0 chr1 33960062 . A G, 211.16 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,28,0:0,27,0:161:249,164,0,2037,164,2037:255,165,0:0,0:2.1116e+02,1.6116e+02,0.0000e+00,4.5000e+02,1.9593e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,30:0,0,34,21 chr1 33960063 . G . PASS END=33960099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,120,1800:0,123,255:40,0 chr1 33960100 . T . PASS END=33961065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:35:0,84,1305:0,84,255:40,0 chr1 33961066 . A . PASS END=33961071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,85,255:26,0 chr1 33961072 . C . PASS END=33961075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 33961076 . G . PASS END=33961076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 33985118 . C . PASS END=33985124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,676:0,57,255:19,0 chr1 33985125 . G . PASS END=33985131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr1 33985132 . A . PASS END=33985253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,978:0,81,255:40,0 chr1 33985254 . T . PASS END=33985270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:24,0 chr1 33985271 . T . PASS END=33985274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 33985275 . C . PASS END=33985276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 33985277 . C . PASS END=33985277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 33985412 . C . PASS END=33985416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:25,0 chr1 33985417 . C . PASS END=33985417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:23,0 chr1 33985418 . T . PASS END=33985418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 33985419 . T . PASS END=33985419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 33985420 . G . PASS END=33985430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 33985431 . G . PASS END=33985431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,837:0,48,255:24,0 chr1 33985432 . C . PASS END=33985432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 33985433 . A . PASS END=33985433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 33985434 . C . PASS END=33985436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 33985437 . A . PASS END=33985437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,815:0,34,255:25,0 chr1 33985438 . G . PASS END=33985439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 33985440 . C . PASS END=33985444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 33985445 . A . PASS END=33985445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33985446 . T . PASS END=33985447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 33985448 . A . PASS END=33985449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33985450 . G . PASS END=33985451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,956:0,70,255:26,0 chr1 33985452 . G . PASS END=33985461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1040:0,87,255:29,0 chr1 33985462 . A . PASS END=33985462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:28,0 chr1 33985463 . G . PASS END=33985465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:30,0 chr1 33985466 . A . PASS END=33985466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 33985467 . C . PASS END=33985468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1155:0,90,255:30,0 chr1 33985469 . A . PASS END=33985469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr1 33985470 . G . PASS END=33985470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 33985471 . G . PASS END=33985471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:27,0 chr1 33985472 . A . PASS END=33985473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 33985474 . C . PASS END=33985476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 33985477 . G . PASS END=33985477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 33985478 . G . PASS END=33985500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,950:0,70,255:26,0 chr1 33985501 . A . PASS END=33985501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 33985502 . G . PASS END=33985502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 33985503 . C . PASS END=33985503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 33985504 . A . PASS END=33985514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,741:0,61,255:25,0 chr1 33985515 . C . PASS END=33985515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:23,0 chr1 33985516 . A . PASS END=33985545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:26,0 chr1 33985546 . G . PASS END=33985550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,69,255:18,0 chr1 33987063 . C . PASS END=33987065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,105,1576:0,105,255:40,0 chr1 33987066 . G . PASS END=33987066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1560:0,72,255:40,0 chr1 33987067 . T . PASS END=33987075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:94:48:0,94,1463:0,94,255:40,0 chr1 33987076 . G . PASS END=33987076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1501:0,75,255:40,0 chr1 33987077 . C . PASS END=33987093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:50:0,86,1575:0,86,255:40,0 chr1 33987094 . T . PASS END=33987094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:75:51:0,75,1521:0,75,255:40,0 chr1 33987095 . T . PASS END=33987100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,147,255:40,0 chr1 33987101 . T . PASS END=33987101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:58:49:0,58,1422:0,58,255:39,0 chr1 33987102 . T . PASS END=33987150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:37:0,85,1426:0,85,255:40,0 chr1 33988823 . C . PASS END=33988829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1197:0,102,255:36,0 chr1 33988830 . T . PASS END=33988830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1168:0,77,255:35,0 chr1 33988831 . T . PASS END=33989000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:32:0,84,1260:0,96,255:40,0 chr1 33989001 . T . PASS END=33989001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 33989002 . C . PASS END=33989005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 33989006 . T . PASS END=33989007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr1 33989008 . T . PASS END=33989008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:24,0 chr1 33989009 . C . PASS END=33989009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 33989010 . T . PASS END=33989016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 33989017 . T . PASS END=33989017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 33989018 . T . PASS END=33989018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:28,0 chr1 33989019 . C . PASS END=33989019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 33990482 . C . PASS END=33990486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 33990487 . A . PASS END=33990487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 33990488 . A . PASS END=33990499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,791:0,66,255:26,0 chr1 33990500 . C . PASS END=33990503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 33990504 . A . PASS END=33990504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 33990505 . C . PASS END=33990505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 33990506 . T . PASS END=33990506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 33990507 . G . PASS END=33990566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1149:0,80,255:34,0 chr1 33990567 . C . PASS END=33990571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1125:0,72,255:26,0 chr1 33990572 . C . PASS END=33990572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 33990573 . T . PASS END=33990573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 33990574 . G . PASS END=33990587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,993:0,87,255:29,0 chr1 33990588 . C . PASS END=33990607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,1035:0,72,255:26,0 chr1 33990608 . T . PASS END=33990608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 33990609 . C . PASS END=33990633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,731:0,63,255:23,0 chr1 33990634 . T . PASS END=33990643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 33992796 . T . PASS END=33992861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:41:0,96,1421:0,96,255:40,0 chr1 33998650 . C . PASS END=33998673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 33998674 . T . PASS END=33998674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 33998675 . C . PASS END=33998701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 33998702 . G . PASS END=33998743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,598:0,45,255:19,0 chr1 33998744 . G . PASS END=33998761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:22,0 chr1 33998762 . C . PASS END=33998762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:19,0 chr1 33998763 . A . PASS END=33998764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 33998765 . G . PASS END=33998765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 33998766 . G . PASS END=33998777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,668:0,60,255:20,0 chr1 33998778 . A . PASS END=33998781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 33998782 . C . PASS END=33998782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 33998783 . C . PASS END=33998800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 33998801 . T . PASS END=33998805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 33998806 . T . PASS END=33998806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 33998807 . C . PASS END=33998817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 33998818 . T . PASS END=33998829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 33999396 . G . PASS END=33999507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:36:0,96,1440:0,108,255:40,0 chr1 34002622 . C . PASS END=34002695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,109,1369:0,109,255:40,0 chr1 34003036 . C . PASS END=34003037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 34003038 . A . PASS END=34003043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr1 34003044 . C . PASS END=34003044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr1 34003045 . T . PASS END=34003197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:30:0,83,1125:0,83,255:40,0 chr1 34003198 . C . PASS END=34003209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,84,255:25,0 chr1 34006125 . G . PASS END=34006142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 34006143 . C . PASS END=34006156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:22,0 chr1 34006157 . C . PASS END=34006157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 34006158 . C . PASS END=34006158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 34006159 . A . PASS END=34006159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 34006160 . T . PASS END=34006228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,740:0,62,255:26,0 chr1 34006229 . G . PASS END=34006229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 34006230 . A . PASS END=34006240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 34006241 . A . PASS END=34006241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 34006242 . A . PASS END=34006253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:22,0 chr1 34006254 . C . PASS END=34006254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 34006255 . C . PASS END=34006263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,799:0,66,255:22,0 chr1 34006264 . A . PASS END=34006264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 34006265 . T . PASS END=34006265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 34006266 . T . PASS END=34006266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:18,0 chr1 34006267 . G . PASS END=34006268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 34006269 . G . PASS END=34006270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 34006271 . A . PASS END=34006273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 34006274 . A . PASS END=34006274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:17,0 chr1 34006275 . G . PASS END=34006290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 34006291 . C . PASS END=34006298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 34006730 . C . PASS END=34006909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,113,1240:0,113,255:40,0 chr1 34008320 . C . PASS END=34008322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 34008323 . G . PASS END=34008342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:25,0 chr1 34008343 . G . PASS END=34008354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 34008355 . T . PASS END=34008356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 34008357 . G . PASS END=34008478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1102:0,87,255:40,0 chr1 34008479 . G . PASS END=34008490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,80,255:24,0 chr1 34008491 . A . PASS END=34008491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 34008492 . G . PASS END=34008492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 34008493 . A . PASS END=34008493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 34008494 . T . PASS END=34008495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 34008496 . A . PASS END=34008496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 34011637 . C . PASS END=34011673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,861:0,62,255:26,0 chr1 34011674 . G . PASS END=34011803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:31:0,93,1186:0,93,255:40,0 chr1 34011804 . A . PASS END=34011804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:69:40:0,69,1047:0,69,255:33,0 chr1 34011805 . C . PASS END=34011819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1303:0,95,255:36,0 chr1 34015777 . C . PASS END=34015785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr1 34015786 . G . PASS END=34015786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 34015787 . A . PASS END=34015787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 34015788 . G . PASS END=34015805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 34015806 . T . PASS END=34015806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 34015807 . G . PASS END=34015860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,553:0,48,255:19,0 chr1 34015861 . T . PASS END=34015872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:23,0 chr1 34015873 . G . PASS END=34015873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 34015874 . C . PASS END=34015882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr1 34015883 . T . PASS END=34015883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 34015884 . C . PASS END=34015898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 34015899 . T . PASS END=34015899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 34015900 . C . PASS END=34015902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 34015903 . C . PASS END=34015916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 34015917 . T . PASS END=34015917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 34015918 . G . PASS END=34015934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:17,0 chr1 34015935 . T . PASS END=34015935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 34015936 . G . PASS END=34015941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 34015942 . A . PASS END=34015950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,37,255:13,0 chr1 34023334 . A . PASS END=34023345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,66,255:23,0 chr1 34023346 . G . PASS END=34023346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 34023347 . G . PASS END=34023358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,922:0,69,255:25,0 chr1 34023359 . C . PASS END=34023359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 34023360 . C . PASS END=34023379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,909:0,62,255:26,0 chr1 34023380 . G . PASS END=34023381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 34023382 . T . PASS END=34023382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 34023383 . G . PASS END=34023383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 34023384 . A . PASS END=34023384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 34023385 . G . PASS END=34023522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1271:0,81,255:40,0 chr1 34024900 . T . PASS END=34024911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,933:0,65,255:26,0 chr1 34024912 . G . PASS END=34024914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34024915 . G . PASS END=34024915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 34024916 . C . PASS END=34025053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1148:0,83,255:40,0 chr1 34025054 . T . PASS END=34025062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:24,0 chr1 34025063 . A . PASS END=34025071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:21:0,51,765:0,63,255:18,0 chr1 34025072 . T . PASS END=34025072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,721:0,32,255:16,0 chr1 34025073 . G . PASS END=34025073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 34033193 . G . PASS END=34033194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 34033195 . A . PASS END=34033195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 34033196 . C . PASS END=34033198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 34033199 . A . PASS END=34033199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 34033200 . G . PASS END=34033203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 34033204 . G . PASS END=34033210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 34033211 . T . PASS END=34033211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 34033212 . G . PASS END=34033214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 34033215 . C . PASS END=34033215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,963:0,35,255:26,0 chr1 34033216 . G . PASS END=34033218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 34033219 . C . PASS END=34033220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr1 34033221 . G . PASS END=34033441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:34:0,93,1229:0,95,255:40,0 chr1 34034974 . C . PASS END=34034974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 34034975 . A . PASS END=34035126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:31:0,81,1208:0,83,255:40,0 chr1 34035127 . G . PASS END=34035147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:23:0,60,900:0,69,255:26,0 chr1 34037132 . T . PASS END=34037132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 34037133 . T . PASS END=34037133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 34037134 . C . PASS END=34037142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 34037143 . G . PASS END=34037179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,815:0,66,255:26,0 chr1 34037180 . G . PASS END=34037200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 34037201 . C . PASS END=34037202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 34037203 . G . PASS END=34037229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1133:0,87,255:30,0 chr1 34037230 . A . PASS END=34037241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,992:0,78,255:26,0 chr1 34037242 . G . PASS END=34037245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 34037246 . G . PASS END=34037247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 34037248 . A . PASS END=34037249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34037250 . C . PASS END=34037282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,67,255:25,0 chr1 34037283 . G . PASS END=34037288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:18,0 chr1 34037289 . C . PASS END=34037289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:17,0 chr1 34037290 . T . PASS END=34037309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:17,0 chr1 34037310 . A . PASS END=34037326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 34038106 . G . PASS END=34038176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:83:29:0,83,1186:0,83,255:40,0 chr1 34038177 . C . PASS END=34038213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1551:0,113,255:40,0 chr1 34038214 . T C, 49.35 PASS DP=44;MQ=248.98;MQRankSum=5.079;ReadPosRankSum=-0.577;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,20,0:0.455,0.000:44:15,4,0:9,16,0:48:84,0,50,712,830,1541:255,0,255:23,0:4.9350e+01,7.2222e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,8,12:15,9,14,6 chr1 34038215 . G . PASS END=34038239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:41:0,84,1260:0,110,255:40,0 chr1 34038240 . T . PASS END=34038251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:26:0,68,1022:0,68,255:26,0 chr1 34038252 . A . PASS END=34038258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 34038259 . T . PASS END=34038259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 34038260 . C . PASS END=34038260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 34038261 . T . PASS END=34038261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 34038262 . T . PASS END=34038272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 34038273 . G . PASS END=34038273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr1 34038274 . G . PASS END=34038276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 34038277 . G . PASS END=34038291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,515:0,47,255:16,0 chr1 34042896 . C . PASS END=34042896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 34042897 . T . PASS END=34042897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 34042898 . T . PASS END=34042918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,757:0,66,255:26,0 chr1 34042919 . C . PASS END=34042924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:30,0 chr1 34042925 . A . PASS END=34042925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 34042926 . G . PASS END=34043037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:38,0 chr1 34043038 . T . PASS END=34043039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 34043040 . G . PASS END=34043042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 34043043 . T . PASS END=34043061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 34043062 . C . PASS END=34043072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:17,0 chr1 34043073 . T . PASS END=34043078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 34043079 . A . PASS END=34043083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 34043084 . G . PASS END=34043084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 34046353 . C . PASS END=34046439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,128,255:40,0 chr1 34046440 . T . PASS END=34046440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1725:0,76,255:40,0 chr1 34046441 . C . PASS END=34046462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,108,1620:0,116,255:40,0 chr1 34046463 . C . PASS END=34046463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1402:0,68,255:35,0 chr1 34046464 . T . PASS END=34046468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:37,0 chr1 34046469 . G . PASS END=34046469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1351:0,43,255:35,0 chr1 34046470 . C . PASS END=34046472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:36,0 chr1 34046473 . T . PASS END=34046473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:33,0 chr1 34046474 . C . PASS END=34046474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 34046475 . A . PASS END=34046480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1283:0,75,255:33,0 chr1 34046481 . G . PASS END=34046481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr1 34046482 . G . PASS END=34046483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:29,0 chr1 34046484 . C . PASS END=34046484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:29,0 chr1 34046485 . T . PASS END=34046485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:29,0 chr1 34046486 . C . PASS END=34046488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 34046489 . T . PASS END=34046493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:30:0,66,1078:0,66,255:25,0 chr1 34046494 . A . PASS END=34046498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,996:0,48,255:25,0 chr1 34046499 . C . PASS END=34046499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 34049242 . C . PASS END=34049410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:32:0,83,1069:0,83,255:40,0 chr1 34049411 . C . PASS END=34049411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:29,0 chr1 34049412 . T . PASS END=34049428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1194:0,86,255:31,0 chr1 34049429 . C . PASS END=34049430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:25,0 chr1 34052104 . C . PASS END=34052217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:95:47:0,95,1710:0,95,255:40,0 chr1 34052688 . C . PASS END=34052768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,109,1784:0,109,255:40,0 chr1 34058061 . T . PASS END=34058089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,114,1710:0,135,255:40,0 chr1 34065714 . C . PASS END=34065841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:98:38:0,98,1388:0,98,255:40,0 chr1 34066373 . T . PASS END=34066610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:84:41:0,84,1260:0,123,255:40,0 chr1 34067969 . C . PASS END=34067972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:30,0 chr1 34067973 . T . PASS END=34067973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 34067974 . G . PASS END=34068114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:30:0,90,1155:0,90,255:40,0 chr1 34068115 . G . PASS END=34068115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:30,0 chr1 34068116 . T . PASS END=34068131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1171:0,88,255:30,0 chr1 34068132 . T . PASS END=34068146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,73,255:26,0 chr1 34070882 . C . PASS END=34071050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:31:0,84,1260:0,93,255:40,0 chr1 34071051 . G . PASS END=34071070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:28,0 chr1 34071463 . C . PASS END=34071471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 34071472 . C . PASS END=34071472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 34071473 . A . PASS END=34071539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:31:0,85,1133:0,85,255:40,0 chr1 34071540 . A . PASS END=34071540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:35:41:0,35,1239:0,35,255:34,0 chr1 34071541 . G . PASS END=34071584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,86,255:38,0 chr1 34071585 . A . PASS END=34071588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 34076641 . C . PASS END=34076647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:26,0 chr1 34076648 . C . PASS END=34076648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 34076649 . T . PASS END=34076658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 34076659 . A . PASS END=34076665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 34076666 . C . PASS END=34076666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 34076667 . C . PASS END=34076668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 34076669 . A . PASS END=34076669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:27,0 chr1 34076670 . T . PASS END=34076674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 34076675 . G . PASS END=34076675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 34076676 . G . PASS END=34076676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 34076677 . A . PASS END=34076677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr1 34076678 . G . PASS END=34076680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 34076681 . G . PASS END=34076681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 34076682 . T . PASS END=34076728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1149:0,80,255:33,0 chr1 34076729 . G . PASS END=34076729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1016:0,74,255:29,0 chr1 34076730 . C . PASS END=34076780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1164:0,85,255:37,0 chr1 34076781 . G . PASS END=34076781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:33,0 chr1 34076782 . G . PASS END=34076792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1260:0,94,255:36,0 chr1 34076793 . A . PASS END=34076793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:34,0 chr1 34076794 . T . PASS END=34076824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1208:0,83,255:36,0 chr1 34076825 . G . PASS END=34076825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:26,0 chr1 34076826 . A . PASS END=34076826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 34076827 . A . PASS END=34076839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,925:0,64,255:26,0 chr1 34076840 . G . PASS END=34076840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:25,0 chr1 34076841 . A . PASS END=34076847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr1 34076848 . C . PASS END=34076848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 34076849 . T . PASS END=34076850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 34080104 . C . PASS END=34080192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:30:0,81,1094:0,86,255:36,0 chr1 34080193 . A . PASS END=34080198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 34080199 . T . PASS END=34080199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:24,0 chr1 34080200 . C . PASS END=34080205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 34080206 . T . PASS END=34080220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:19:0,51,765:0,57,255:19,0 chr1 34082506 . C . PASS END=34082575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,99,1485:0,126,255:40,0 chr1 34083099 . C . PASS END=34083199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:35:0,88,1219:0,88,255:40,0 chr1 34083200 . A . PASS END=34083200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:34,0 chr1 34083201 . A . PASS END=34083216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,97,255:34,0 chr1 34083217 . G . PASS END=34083217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 34087767 . T . PASS END=34087871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:40:0,87,1305:0,104,255:40,0 chr1 34088970 . C . PASS END=34089066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,120,1800:0,123,255:40,0 chr1 34090119 . C . PASS END=34090216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1205:0,93,255:40,0 chr1 34090217 . G . PASS END=34090242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:27,0 chr1 34090243 . A . PASS END=34090243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 34090651 . C . PASS END=34090651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 34090652 . C . PASS END=34090655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 34090656 . C . PASS END=34090656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 34090657 . A . PASS END=34090660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 34090661 . G . PASS END=34090661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 34090662 . G . PASS END=34090663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 34090664 . C . PASS END=34090664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 34090665 . G . PASS END=34090665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr1 34090666 . C . PASS END=34090667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 34090668 . G . PASS END=34090670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 34090671 . A . PASS END=34090679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 34090680 . T . PASS END=34090680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 34090681 . G . PASS END=34090695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,576:0,41,255:19,0 chr1 34090696 . G . PASS END=34090705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 34090706 . G . PASS END=34090706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 34090707 . C . PASS END=34090722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 34090723 . A . PASS END=34090750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1047:0,80,255:32,0 chr1 34090751 . T . PASS END=34090751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr1 34090752 . T . PASS END=34090755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 34090756 . A . PASS END=34090756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:29,0 chr1 34090757 . G . PASS END=34090768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1127:0,93,255:31,0 chr1 34090769 . C . PASS END=34090769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 34090770 . C . PASS END=34090811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1074:0,80,255:32,0 chr1 34090812 . T . PASS END=34090838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:27,0 chr1 34090839 . C . PASS END=34090839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 34090840 . T . PASS END=34090840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 34090841 . G . PASS END=34090848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 34090849 . G . LowGQ END=34090849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,494:3,0,255:14,0 chr1 34090850 . A . PASS END=34090854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 34092086 . C . PASS END=34092176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,89,255:40,0 chr1 34092177 . T . PASS END=34092181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 34099022 . C . PASS END=34099135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:40:0,90,1350:0,103,255:40,0 chr1 34100814 . C . PASS END=34100814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 34100815 . A . PASS END=34100815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 34100816 . T . PASS END=34100852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,809:0,66,255:25,0 chr1 34100853 . G . PASS END=34100875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,976:0,81,255:30,0 chr1 34100876 . T . PASS END=34100908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:26,0 chr1 34100909 . A . PASS END=34100930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,652:0,43,255:19,0 chr1 34101960 . C . PASS END=34101960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 34101961 . T . PASS END=34101961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 34101962 . G . PASS END=34101975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,909:0,62,255:26,0 chr1 34101976 . G . PASS END=34101982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:30,0 chr1 34101983 . T . PASS END=34101983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 34101984 . T . PASS END=34102154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:30:0,84,1260:0,90,255:40,0 chr1 34112248 . C . PASS END=34112263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 34112264 . G . PASS END=34112265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 34112266 . A . PASS END=34112296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:36,0 chr1 34112297 . G . PASS END=34112297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,2 chr1 34112298 . A . PASS END=34112298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1310:0,45,255:34,2 chr1 34112299 . A . PASS END=34112299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr1 34112300 . G . PASS END=34112404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1215:0,96,255:40,0 chr1 34112405 . G . PASS END=34112410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:25,0 chr1 34112411 . G . PASS END=34112427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr1 34112428 . G . PASS END=34112428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 34112429 . G . PASS END=34112435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 34117923 . A . PASS END=34117941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1107:0,83,255:35,0 chr1 34117942 . T . PASS END=34117942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:33,0 chr1 34117943 . G . PASS END=34118054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:35:0,82,1260:0,82,255:40,0 chr1 34118055 . C . PASS END=34118061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:64:33:0,64,990:0,64,255:24,0 chr1 34123546 . C . PASS END=34123593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:19,0 chr1 34123594 . T . PASS END=34123603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 34123604 . G . PASS END=34123604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 34123605 . A . PASS END=34123615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 34123616 . T . PASS END=34123737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1227:0,86,255:40,0 chr1 34128490 . C . PASS END=34128494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 34128495 . A . PASS END=34128495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 34128496 . A . PASS END=34128499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 34128500 . A . PASS END=34128500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 34128501 . A . PASS END=34128505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,937:0,72,255:25,0 chr1 34128506 . A . PASS END=34128506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 34128507 . A . PASS END=34128528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,885:0,75,255:26,0 chr1 34128529 . A . PASS END=34128529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 34128530 . G . PASS END=34128530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 34128531 . T . PASS END=34128631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:28:0,83,994:0,83,255:39,0 chr1 34128632 . C . PASS END=34128653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,922:0,62,255:26,0 chr1 34128654 . T . PASS END=34128654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 34128655 . C . PASS END=34128656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 34128657 . T . PASS END=34128692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,623:0,54,255:18,0 chr1 34158530 . C . PASS END=34158656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:98:39:0,98,1523:0,98,255:40,0 chr1 34164353 . C . PASS END=34164357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 34164358 . C . PASS END=34164367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:22,0 chr1 34164368 . G . PASS END=34164368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 34164369 . A . PASS END=34164384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 34164385 . C . PASS END=34164385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 34164386 . G . PASS END=34164391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,873:0,62,255:26,0 chr1 34164392 . C . PASS END=34164395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr1 34164396 . A . PASS END=34164396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 34164397 . C . PASS END=34164401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 34164402 . A . PASS END=34164402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 34164403 . C . PASS END=34164544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:30:0,84,1164:0,88,255:40,0 chr1 34166117 . T . PASS END=34166273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:33:0,82,1095:0,82,255:40,0 chr1 34174689 . C . PASS END=34174692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 34174693 . A . PASS END=34174693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 34174694 . G . PASS END=34174883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:30:0,90,1131:0,90,255:40,0 chr1 34180187 . C . PASS END=34180188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 34180189 . A . PASS END=34180193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 34180194 . C . PASS END=34180194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34180195 . C . PASS END=34180201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1031:0,71,255:26,0 chr1 34180202 . G . PASS END=34180202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 34180203 . A . PASS END=34180203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 34180204 . G . PASS END=34180205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 34180206 . C . PASS END=34180207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,1006:0,68,255:29,0 chr1 34180208 . A . PASS END=34180349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1122:0,90,255:40,1 chr1 34180350 . C . PASS END=34180375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:26,0 chr1 34181886 . C . PASS END=34181886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 34181887 . T . PASS END=34181894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:26,0 chr1 34181895 . T . PASS END=34181896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 34181897 . A . PASS END=34181899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 34181900 . T . PASS END=34181901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34181902 . G . PASS END=34181902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 34181903 . A . PASS END=34181911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 34181912 . T . PASS END=34181933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 34181934 . T . PASS END=34181972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,950:0,81,255:32,0 chr1 34181973 . C . PASS END=34181973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:29,0 chr1 34181974 . G . PASS END=34182038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1158:0,80,255:33,0 chr1 34182039 . C . PASS END=34182040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,80,255:25,0 chr1 34182041 . G . PASS END=34182052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr1 34182053 . T . PASS END=34182078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 34182079 . G . PASS END=34182079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 34182080 . G . PASS END=34182101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,878:0,61,255:24,0 chr1 34189797 . C . PASS END=34189910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,1111:0,82,255:40,0 chr1 34189911 . G . PASS END=34189912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 34189913 . G . PASS END=34189913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr1 34190117 . C . PASS END=34190295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1178:0,83,255:40,0 chr1 34190296 . A . PASS END=34190305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,77,255:25,0 chr1 34190950 . T . PASS END=34190966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 34190967 . A . PASS END=34190967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 34190968 . A . PASS END=34190985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,862:0,69,255:24,0 chr1 34190986 . T . PASS END=34190986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 34190987 . C . PASS END=34190987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 34190988 . T . PASS END=34190988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 34190989 . T . PASS END=34190991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:24,0 chr1 34190992 . C . PASS END=34190992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 34190993 . G . PASS END=34191000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr1 34191001 . A . PASS END=34191001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 34191002 . G . PASS END=34191006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:26,0 chr1 34191007 . G . PASS END=34191009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34191010 . A . PASS END=34191012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1011:0,68,255:27,0 chr1 34191013 . G . PASS END=34191032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 34191033 . A . PASS END=34191033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 34191034 . G . PASS END=34191036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34191037 . A . PASS END=34191051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 34191052 . T . PASS END=34191077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1180:0,83,255:33,0 chr1 34191078 . G . PASS END=34191110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:24,0 chr1 34191111 . G . PASS END=34191120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:17,0 chr1 34191121 . T . PASS END=34191121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:14,0 chr1 34191122 . G . PASS END=34191136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 34191137 . T . PASS END=34191137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 34192148 . C . PASS END=34192148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 34192149 . T . PASS END=34192165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 34192166 . A . PASS END=34192167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 34192168 . G . PASS END=34192187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr1 34192188 . C . PASS END=34192280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,482:0,42,255:19,0 chr1 34192281 . A . PASS END=34192286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 34204741 . C . PASS END=34204742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 34204743 . T . PASS END=34204743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 34204744 . C . PASS END=34204770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,792:0,63,255:26,0 chr1 34204771 . C . PASS END=34204772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 34204773 . A . PASS END=34204773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 34204774 . C . PASS END=34204789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:31,0 chr1 34204790 . G . PASS END=34204790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 34204791 . A . PASS END=34204935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:32:0,87,1194:0,89,255:40,0 chr1 34208881 . T . PASS END=34208888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,574:0,40,255:19,0 chr1 34208889 . G . PASS END=34208899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr1 34208900 . G . PASS END=34208900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 34208901 . C . PASS END=34208905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 34208906 . C . PASS END=34208906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 34208907 . T . PASS END=34208915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 34208916 . G . PASS END=34208917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 34208918 . G . PASS END=34208923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,937:0,75,255:26,0 chr1 34208924 . A . LowGQ END=34208924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,702:10,0,255:22,0 chr1 34208925 . G . PASS END=34208952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,898:0,62,255:26,0 chr1 34208953 . C . PASS END=34208953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 34208954 . A . PASS END=34208967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 34208968 . A . PASS END=34208968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 34208969 . G . PASS END=34209012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,869:0,66,255:26,0 chr1 34209013 . C . PASS END=34209013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 34209014 . G . PASS END=34209020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr1 34209021 . G . PASS END=34209021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 34209022 . C . PASS END=34209025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 34209026 . A . PASS END=34209054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 34209055 . G . PASS END=34209055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 34209056 . C . PASS END=34209158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1086:0,84,255:36,0 chr1 34209159 . G . PASS END=34209169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,900:0,87,255:23,0 chr1 34209170 . A . PASS END=34209207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 34238162 . T . PASS END=34238306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:36:0,99,1485:0,99,255:40,0 chr1 34238307 . C . PASS END=34238307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:37,0 chr1 34238308 . C . PASS END=34238314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:43:0,84,1260:0,113,255:36,0 chr1 34238315 . A . PASS END=34238315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr1 34238316 . G . PASS END=34238319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:41:0,81,1215:0,123,255:27,0 chr1 34238320 . T . PASS END=34238349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 34238350 . T . PASS END=34238352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 34254201 . C . PASS END=34254201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 34254202 . T . PASS END=34254202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1276:0,72,255:36,0 chr1 34254203 . T . PASS END=34254203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 34254204 . C . PASS END=34254204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1349:0,65,255:35,0 chr1 34254205 . A . PASS END=34254208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1394:0,87,255:36,0 chr1 34254209 . G . PASS END=34254209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1221:0,56,255:35,0 chr1 34254210 . A . PASS END=34254223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1314:0,87,255:39,0 chr1 34254224 . A . PASS END=34254224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1325:0,73,255:37,0 chr1 34254225 . G . PASS END=34254300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1215:0,82,255:40,0 chr1 34254301 . T . PASS END=34254313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:28:0,69,1035:0,84,255:26,0 chr1 34258024 . A . PASS END=34258127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:36:0,90,1243:0,90,255:40,0 chr1 34270347 . C . PASS END=34270460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:38:0,96,1380:0,96,255:40,0 chr1 34270461 . C . PASS END=34270497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,102,1530:0,129,255:40,0 chr1 34270498 . G A, 176.41 PASS DP=43;MQ=248.31;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,22,0:0,21,0:126:214,129,0,1635,129,1635:255,129,0:0,0:1.7641e+02,1.2641e+02,0.0000e+00,4.5000e+02,1.6118e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,34:0,0,26,17 chr1 34270499 . C . PASS END=34270499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr1 34276344 . C . PASS END=34276345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 34276346 . T . PASS END=34276346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 34276347 . G . PASS END=34276362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:13,0 chr1 34276363 . G . PASS END=34276363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 34276364 . T . PASS END=34276364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 34276365 . G . PASS END=34276391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,582:0,48,255:19,0 chr1 34276392 . G . PASS END=34276401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 34276402 . A . PASS END=34276402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr1 34276403 . T . PASS END=34276415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 34276416 . G . PASS END=34276416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 34276417 . G . PASS END=34276425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 34276426 . A . PASS END=34276453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,612:0,44,255:19,0 chr1 34276454 . C . PASS END=34276465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:12,0 chr1 34285314 . C . PASS END=34285336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:26,0 chr1 34285337 . C . PASS END=34285341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 34285342 . G A, 130.81 PASS DP=28;MQ=249.79;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,15,0:0,13,0:81:169,84,0,1056,84,1056:255,84,0:0,0:1.3081e+02,8.0813e+01,0.0000e+00,4.5000e+02,1.1558e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,16:0,0,19,9 chr1 34285343 . G . PASS END=34285380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1125:0,90,255:36,0 chr1 34285381 . C T, 160.90 PASS DP=38;MQ=249.10;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,21,0:0,17,0:111:199,114,0,1420,114,1420:255,114,0:0,0:1.6090e+02,1.1090e+02,0.0000e+00,4.5000e+02,1.4567e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,12:0,0,21,17 chr1 34285382 . T . PASS END=34285418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1413:0,101,255:40,0 chr1 34285419 . A . PASS END=34285438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,92,255:36,0 chr1 34286070 . C . PASS END=34286070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 34286071 . T . PASS END=34286071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:27,0 chr1 34286072 . G . PASS END=34286072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 34286073 . A . PASS END=34286075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1116:0,87,255:31,0 chr1 34286076 . T . PASS END=34286076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 34286077 . C . PASS END=34286083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1105:0,83,255:33,0 chr1 34286084 . T . PASS END=34286085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:32,0 chr1 34286086 . G . PASS END=34286087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1164:0,85,255:33,0 chr1 34286088 . C . PASS END=34286088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1081:0,49,255:32,0 chr1 34286089 . T . PASS END=34286105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:34,0 chr1 34286106 . A . PASS END=34286106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:34,0 chr1 34286107 . T . PASS END=34286109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1296:0,94,255:36,0 chr1 34286110 . C . PASS END=34286110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:34,0 chr1 34286111 . A . PASS END=34286117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1373:0,87,255:39,0 chr1 34286118 . G . PASS END=34286125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1305:0,90,255:37,0 chr1 34286126 . A . PASS END=34286126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1310:0,70,255:29,0 chr1 34286127 . T . PASS END=34286128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:40:0,90,1350:0,120,255:30,0 chr1 34286129 . A . PASS END=34286129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:29,0 chr1 34286130 . T . PASS END=34286134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1215:0,91,255:30,0 chr1 34286135 . T . PASS END=34286142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:33:0,60,900:0,99,255:25,0 chr1 34286143 . C . PASS END=34286153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:40:30:0,40,630:0,40,255:19,0 chr1 34286154 . G . LowGQ END=34286154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:33:0,0,831:20,0,255:12,0 chr1 34286155 . T . PASS END=34286155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:45:34:0,45,675:0,52,255:12,0 chr1 34286156 . T . PASS END=34286156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,887:0,24,255:11,0 chr1 34286157 . A . PASS END=34286157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:39:31:0,39,585:0,43,255:10,0 chr1 34291298 . A . PASS END=34291375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:39:0,96,1408:0,96,255:40,0 chr1 34312485 . C . PASS END=34312485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 34312486 . T . PASS END=34312488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 34312489 . G . PASS END=34312490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 34312491 . A . PASS END=34312491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 34312492 . T . PASS END=34312589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1011:0,83,255:37,0 chr1 34312590 . C . PASS END=34312590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 34312591 . G . PASS END=34312592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 34312593 . T . PASS END=34312597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 34329793 . A . PASS END=34329859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:34:0,88,1235:0,88,255:40,0 chr1 34329860 . A . PASS END=34329896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:49:0,114,1737:0,114,255:40,0 chr1 34329897 . T C, 197.47 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,24,0:0,26,0:147:235,150,0,335,335,335:255,153,0:0,0:1.9747e+02,1.4747e+02,0.0000e+00,3.3224e+02,3.6701e+02,3.3525e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,32,18:0,0,16,34 chr1 34329898 . G . PASS END=34329934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:47:0,97,1546:0,97,255:40,0 chr1 34329935 . A . PASS END=34329975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,128,255:40,0 chr1 34329976 . G . PASS END=34329976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,8:60:18:60:0,18,1532:0,18,255:40,0 chr1 34329977 . C . PASS END=34330029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1746:0,120,255:40,0 chr1 34330030 . G . PASS END=34330066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:47:0,114,1644:0,114,255:40,0 chr1 34330067 . A C, 197.02 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,23,0:0,27,0:147:235,150,0,1899,150,1899:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,30:0,0,31,19 chr1 34330068 . A . PASS END=34330104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:45:0,94,1604:0,94,255:40,0 chr1 34330105 . C . PASS END=34330302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:87:37:0,87,1269:0,87,255:40,0 chr1 34330303 . C . PASS END=34330303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:34,0 chr1 34330304 . G . PASS END=34330313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:35,0 chr1 34330314 . T . PASS END=34330314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:29,0 chr1 34330315 . A . PASS END=34330316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:31,0 chr1 34330317 . A . PASS END=34330317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1160:0,78,255:29,0 chr1 34330318 . A . PASS END=34330320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 34330321 . C . PASS END=34330323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 34330324 . T . PASS END=34330324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 34330325 . G . PASS END=34330350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,63,255:27,0 chr1 34330351 . T . PASS END=34330353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 34383695 . C . PASS END=34383695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,829:0,36,255:25,0 chr1 34383696 . A . PASS END=34383697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 34383698 . A . PASS END=34383698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 34383699 . G . PASS END=34383701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 34383702 . A . PASS END=34383702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr1 34383703 . G . PASS END=34383707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 34383708 . C . PASS END=34383708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34383709 . T . PASS END=34383709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 34383710 . T . PASS END=34383711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 34383712 . T . PASS END=34383712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 34383713 . G . PASS END=34383715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 34383716 . C . PASS END=34383716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 34383717 . C . PASS END=34383741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 34383742 . A . PASS END=34383742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 34383743 . T . PASS END=34383744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 34383745 . C . PASS END=34383745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 34383746 . T . PASS END=34383756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 34383757 . G . PASS END=34383760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 34383761 . A . PASS END=34383763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 34383764 . A . PASS END=34383765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,86,255:26,0 chr1 34383766 . C . PASS END=34383769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 34383770 . A . PASS END=34383770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 34383771 . G . PASS END=34383793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 34383794 . G . PASS END=34383814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,937:0,62,255:25,0 chr1 34383815 . T . PASS END=34383815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 34383816 . C . PASS END=34383817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 34383818 . G . PASS END=34383821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 34383822 . T . PASS END=34383822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:24,0 chr1 34383823 . G . PASS END=34383824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:25,0 chr1 34383825 . T . PASS END=34383825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:21,0 chr1 34383826 . A . PASS END=34383847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr1 34383848 . G . PASS END=34383856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 34383857 . A . PASS END=34383857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:18,0 chr1 34383858 . T . PASS END=34383894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 34383895 . A . PASS END=34383902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 34401361 . C . PASS END=34401363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 34401364 . T . PASS END=34401364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 34401365 . G . PASS END=34401381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:25,0 chr1 34401382 . A . PASS END=34401382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 34401383 . G . PASS END=34401388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr1 34401389 . C . PASS END=34401391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 34401392 . G . PASS END=34401392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 34401393 . G . PASS END=34401511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1119:0,85,255:38,0 chr1 34401512 . A . PASS END=34401512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 34401513 . T . PASS END=34401515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 34401516 . G . PASS END=34401518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 34401519 . A . PASS END=34401519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:25,0 chr1 34401520 . G . PASS END=34401531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:25,0 chr1 34401532 . T . PASS END=34401551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:17,0 chr1 34401552 . A . PASS END=34401553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 34401554 . A . PASS END=34401555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 34498195 . C . PASS END=34498307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,105,1492:0,105,255:40,0 chr1 34554578 . C . PASS END=34554761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1215:0,84,255:40,0 chr1 34554762 . T . PASS END=34554779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr1 34554780 . A . PASS END=34554794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:16:0,45,620:0,48,255:16,0 chr1 34630512 . C . PASS END=34630624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:3,0 chr1 34630625 . A . PASS END=34630689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 34630690 . G . LowGQ END=34630690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 34630691 . C . PASS END=34630698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 34631348 . C . PASS END=34631381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,99,1445:0,99,255:40,0 chr1 34631382 . T . PASS END=34631382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1601:0,75,255:40,0 chr1 34631383 . C . PASS END=34631390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,116,1604:0,116,255:40,2 chr1 34631391 . G . PASS END=34631391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:49:45:0,49,1512:0,49,255:40,2 chr1 34631392 . G . PASS END=34631414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:43:0,82,1459:0,82,255:40,0 chr1 34643391 . A . PASS END=34643391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 34643392 . T . PASS END=34643393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 34643394 . A . PASS END=34643394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 34643395 . G . PASS END=34643460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:31:0,87,1172:0,87,255:40,0 chr1 34643461 . T . PASS END=34643461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1213:0,56,255:34,0 chr1 34643462 . G . PASS END=34643462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1266:0,70,255:34,0 chr1 34643463 . G . PASS END=34643466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,108,1620:0,114,255:38,0 chr1 34643467 . G . PASS END=34643467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1341:0,62,255:35,0 chr1 34643468 . C . PASS END=34643468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 34643469 . G . PASS END=34643473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1337:0,62,255:36,0 chr1 34643474 . T . PASS END=34643474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1434:0,101,255:35,0 chr1 34643475 . G . PASS END=34643480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:37:0,62,1290:0,62,255:35,0 chr1 34643481 . C . PASS END=34643481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:30,0 chr1 34643482 . C . PASS END=34643486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:29,0 chr1 34643487 . T . PASS END=34643488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,92,255:29,0 chr1 34643489 . C . PASS END=34643490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1172:0,60,255:28,0 chr1 34643491 . C . PASS END=34643492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:25,0 chr1 34643493 . G . PASS END=34643493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:27,0 chr1 34643494 . C . PASS END=34643494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:27,0 chr1 34643495 . C . PASS END=34643496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:28,0 chr1 34643497 . T . PASS END=34643498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,1092:0,41,255:26,0 chr1 34643499 . G . PASS END=34643499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 34643500 . T . PASS END=34643500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr1 34643501 . G . PASS END=34643501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 34643502 . G . PASS END=34643505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:52:30:0,52,1086:0,52,255:27,0 chr1 34643506 . A . PASS END=34643506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 34643507 . G . PASS END=34643509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr1 34643510 . C . PASS END=34643510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 34643511 . C . PASS END=34643511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 34643512 . C . PASS END=34643512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 34643513 . C . PASS END=34643513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 34643514 . T . PASS END=34643514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:30,0 chr1 34643515 . G . PASS END=34643515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr1 34643516 . C . PASS END=34643516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 34643517 . G . PASS END=34643518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1233:0,66,255:32,0 chr1 34643519 . C . PASS END=34643520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 34643521 . T . PASS END=34643524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:33,0 chr1 34643525 . C . PASS END=34643525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 34643526 . C . PASS END=34643526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 34643527 . C . PASS END=34643531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1412:0,111,255:37,0 chr1 34643532 . C . LowGQ END=34643532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1116:44,0,255:31,0 chr1 34643533 . C . PASS END=34643585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1233:0,89,255:36,0 chr1 34643586 . T . PASS END=34643586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:31,0 chr1 34643587 . G . PASS END=34643640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1111:0,82,255:33,0 chr1 34643641 . C . PASS END=34643643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 34643644 . C . PASS END=34643647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 34643648 . G . PASS END=34643663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,64,255:25,0 chr1 34643664 . C . PASS END=34643664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 34643665 . C . PASS END=34643675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 34643676 . A . PASS END=34643710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 34662826 . A . PASS END=34662826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 34662827 . G . PASS END=34662831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:23,0 chr1 34662832 . G . PASS END=34662832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:23,0 chr1 34662833 . G . PASS END=34662836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:26:0,67,947:0,67,255:24,0 chr1 34662837 . T . PASS END=34662837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 34662838 . C . PASS END=34662850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 34662851 . G . PASS END=34662853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 34662854 . G . PASS END=34662858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 34662859 . C . PASS END=34662861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34662862 . C . PASS END=34662862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 34662863 . T . PASS END=34662879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 34662880 . G . PASS END=34662881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 34662882 . T . PASS END=34662887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 34662888 . G . PASS END=34662888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 34662889 . C . PASS END=34662920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr1 34662921 . A . PASS END=34662923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 34662924 . G . PASS END=34662928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 34662929 . G . PASS END=34662942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 34662943 . A . PASS END=34662968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1041:0,84,255:32,0 chr1 34662969 . G . PASS END=34662970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 34662971 . G . PASS END=34662979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:30,0 chr1 34662980 . C . PASS END=34662980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 34662981 . C . PASS END=34663019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1194:0,83,255:32,0 chr1 34663020 . A . PASS END=34663020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 34663021 . G . PASS END=34663042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:30,0 chr1 34663043 . G . PASS END=34663048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 34663049 . G . PASS END=34663066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:30,0 chr1 34663067 . A . PASS END=34663067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 34663068 . A . PASS END=34663087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1127:0,86,255:31,0 chr1 34663088 . A . PASS END=34663088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:30,0 chr1 34663089 . G . PASS END=34663142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1194:0,83,255:33,0 chr1 34663143 . C . PASS END=34663179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1241:0,86,255:33,0 chr1 34663180 . G A, 145.85 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,20,0:0,13,0:96:184,99,0,1234,99,1234:255,99,0:0,0:1.4585e+02,9.5851e+01,0.0000e+00,4.5000e+02,1.3062e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,18:0,0,10,23 chr1 34663181 . G . PASS END=34663207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1218:0,86,255:35,0 chr1 34663208 . C G, 155.34 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1372,108,1372:255,108,0:0,0:1.5534e+02,1.0534e+02,0.0000e+00,4.5000e+02,1.4011e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,22:0,0,18,18 chr1 34663209 . A . PASS END=34663242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1149:0,82,255:36,0 chr1 34663243 . G . PASS END=34663244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 34663245 . C . PASS END=34663245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 34663246 . C . PASS END=34663252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr1 34663253 . A . PASS END=34663298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,817:0,61,255:26,0 chr1 34663299 . T . PASS END=34663299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 34663300 . C . PASS END=34663319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr1 34663320 . A . PASS END=34663320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:21,0 chr1 34663321 . C . PASS END=34663345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,922:0,69,255:24,0 chr1 34663346 . A . PASS END=34663357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,63,255:18,0 chr1 34663358 . G . PASS END=34663373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:22,0 chr1 34663374 . T . PASS END=34663391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:23,0 chr1 34663392 . C . PASS END=34663410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:18:0,54,660:0,54,255:19,0 chr1 34663411 . C G, 101.18 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,5,0:0,13,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,9:0,0,10,8 chr1 34663412 . A . PASS END=34663448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,651:0,51,255:19,0 chr1 34663449 . C . PASS END=34663462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,577:0,57,255:19,0 chr1 34663463 . A . PASS END=34663463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 34663464 . T . PASS END=34663480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 34663481 . G . PASS END=34663481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 34663482 . C . PASS END=34663490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 34663491 . C . PASS END=34663511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 34663512 . T . PASS END=34663514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 34666373 . A . PASS END=34666385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr1 34666386 . C . PASS END=34666396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 34666397 . C . PASS END=34666399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,1 chr1 34666400 . A . PASS END=34666403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 34666404 . G . PASS END=34666404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:18,0 chr1 34666405 . G . PASS END=34666408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 34666409 . A . PASS END=34666412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 34666413 . G . PASS END=34666414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 34666415 . G . PASS END=34666423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 34666424 . T . PASS END=34666427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 34666428 . C . PASS END=34666442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 34666443 . C . PASS END=34666443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 34666444 . C . PASS END=34666448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 34666449 . G . PASS END=34666450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,828:0,53,255:22,0 chr1 34666451 . A . PASS END=34666458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,833:0,69,255:25,0 chr1 34666459 . G . PASS END=34666459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 34666460 . G . PASS END=34666469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 34666470 . T . PASS END=34666470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 34666471 . T . PASS END=34666489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 34666490 . C . PASS END=34666493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 34666494 . A . PASS END=34666494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 34666495 . T . PASS END=34666510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 34666511 . C . PASS END=34666511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 34666512 . C . PASS END=34666512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 34666513 . A . PASS END=34666519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,959:0,65,255:26,0 chr1 34666520 . C . PASS END=34666520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 34666521 . T . PASS END=34666521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:26,0 chr1 34666522 . A . PASS END=34666525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 34666526 . G . PASS END=34666527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 34666528 . C . PASS END=34666536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 34666537 . A . PASS END=34666537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 34666538 . A . PASS END=34666546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 34666547 . T . PASS END=34666609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,778:0,66,255:26,0 chr1 34666610 . A . PASS END=34666610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 34666611 . A . PASS END=34666615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 34666616 . A . PASS END=34666616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 34666617 . T . PASS END=34666622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 34666623 . G . PASS END=34666628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:19,0 chr1 34666629 . G . PASS END=34666633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:21:0,39,585:0,63,255:13,0 chr1 34667685 . T . PASS END=34667825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,102,1530:0,117,255:40,0 chr1 34667826 . T . PASS END=34667836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:35:0,96,1440:0,104,255:34,0 chr1 34667837 . C . PASS END=34667843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,89,255:26,0 chr1 34667844 . C . PASS END=34667848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1031:0,81,255:27,0 chr1 34667849 . T . PASS END=34667860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,64,255:26,0 chr1 34673758 . G . PASS END=34673758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:34,0 chr1 34673759 . G . PASS END=34673775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:35:0,98,1335:0,98,255:38,0 chr1 34673776 . G . PASS END=34673776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr1 34673777 . C . PASS END=34673810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1380:0,84,255:39,0 chr1 34673811 . G . PASS END=34673811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr1 34673812 . C . PASS END=34673835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,105,1426:0,111,255:39,0 chr1 34677811 . G . PASS END=34677826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:31:0,89,1271:0,89,255:39,0 chr1 34677827 . C . PASS END=34677827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:38,0 chr1 34677828 . A . PASS END=34677968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:39:0,84,1308:0,84,255:40,0 chr1 34677969 . A . PASS END=34677969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1296:0,70,255:35,0 chr1 34677970 . G . PASS END=34677990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,94,255:35,0 chr1 34677991 . T . PASS END=34677991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:26,0 chr1 34677992 . T . PASS END=34677992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:25,0 chr1 34677993 . T . PASS END=34677998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,943:0,65,255:26,0 chr1 34677999 . A . PASS END=34678003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:26:0,50,855:0,50,255:19,0 chr1 34678004 . A . PASS END=34678004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:16,0 chr1 34678005 . T . PASS END=34678007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:51:26:0,51,765:0,62,255:17,0 chr1 34684287 . G . PASS END=34684362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,104,1560:0,104,255:40,0 chr1 35183993 . T . PASS END=35184008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:25,0 chr1 35184009 . G . PASS END=35184009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 35184010 . C . PASS END=35184010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 35222932 . A . PASS END=35222944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1006:0,84,255:36,0 chr1 35222945 . T . PASS END=35222945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:34,0 chr1 35222946 . C . PASS END=35223145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,94,255:40,0 chr1 35223146 . C . PASS END=35223147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:30,0 chr1 35223148 . C . PASS END=35223148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1058:0,93,255:31,0 chr1 35223149 . A . PASS END=35223149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 35223150 . T . PASS END=35223164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1124:0,80,255:32,0 chr1 35223165 . C . PASS END=35223165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1007:0,60,255:26,0 chr1 35223166 . C . PASS END=35223167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 35223168 . G . PASS END=35223194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:25,0 chr1 35223195 . A . PASS END=35223195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 35223196 . C . PASS END=35223216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,876:0,61,255:24,0 chr1 35223217 . G . PASS END=35223217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 35223218 . C . PASS END=35223236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,848:0,69,255:24,0 chr1 35223237 . G . PASS END=35223237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 35223238 . A . PASS END=35223250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 35223251 . A . PASS END=35223290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,545:0,43,255:19,0 chr1 35223291 . C . PASS END=35223291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 35223292 . G . PASS END=35223295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 35223296 . A . PASS END=35223300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 35223301 . C . PASS END=35223310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:17,0 chr1 35223311 . T . PASS END=35223311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 35223312 . C . PASS END=35223316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 35223317 . G . PASS END=35223319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35223320 . C . PASS END=35223320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 35223321 . A . PASS END=35223321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35223322 . T . PASS END=35223322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 35223323 . A . PASS END=35223343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:26,0 chr1 35223344 . A . PASS END=35223345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35223346 . G . PASS END=35223348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,992:0,68,255:26,0 chr1 35223349 . A . PASS END=35223517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1064:0,80,255:40,0 chr1 35223518 . T . PASS END=35223518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:30,0 chr1 35223519 . C . PASS END=35223533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,92,255:32,0 chr1 35223534 . C . PASS END=35223534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:31,0 chr1 35223535 . C . PASS END=35223535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 35223536 . T . PASS END=35223536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:32,0 chr1 35223537 . C . PASS END=35223546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1241:0,89,255:34,0 chr1 35223547 . A . PASS END=35223547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:28,0 chr1 35223548 . T . PASS END=35223561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:31:0,84,1260:0,92,255:31,0 chr1 35223562 . A . PASS END=35223564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 35223565 . A . PASS END=35223575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 35223576 . G . PASS END=35223576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 35223577 . T . PASS END=35223578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 35223579 . C . PASS END=35223579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 35223580 . C . PASS END=35223588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 35223589 . A . PASS END=35223589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:26,0 chr1 35223590 . G . PASS END=35223603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:29,0 chr1 35223604 . A . PASS END=35223604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35223605 . T . PASS END=35223605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35223606 . G . PASS END=35223606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35223607 . T . PASS END=35223607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35223608 . G . PASS END=35223621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1070:0,74,255:26,0 chr1 35223622 . C . PASS END=35223625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 35223626 . A . PASS END=35223628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 35223629 . G . PASS END=35223629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:27,0 chr1 35223630 . T . PASS END=35223637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:28,0 chr1 35223638 . C . PASS END=35223638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 35223639 . T . PASS END=35223650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 35223651 . A . PASS END=35223651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr1 35223652 . G . PASS END=35223652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 35223653 . A . PASS END=35223653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 35223654 . C . PASS END=35223654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr1 35223655 . G . PASS END=35223657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35223658 . C . PASS END=35223658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35223659 . T . PASS END=35223659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,892:0,29,255:24,0 chr1 35223660 . C . PASS END=35223660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 35223661 . C . PASS END=35223662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 35223663 . T . PASS END=35223663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:25,0 chr1 35223664 . T . PASS END=35223666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35223667 . G . PASS END=35223667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:26,0 chr1 35223668 . G . PASS END=35223670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35223671 . A . PASS END=35223671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35223672 . C . PASS END=35223672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:25,0 chr1 35223673 . C . PASS END=35223674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35223675 . C . PASS END=35223682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1141:0,87,255:30,0 chr1 35223683 . T . PASS END=35223684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 35223685 . G . PASS END=35223698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 35223699 . T . PASS END=35223699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:28,0 chr1 35223700 . C . PASS END=35223705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 35223706 . C . PASS END=35223707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,814:0,70,255:26,0 chr1 35223708 . C . PASS END=35223716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,932:0,81,255:27,0 chr1 35223717 . C . PASS END=35223744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,64,255:26,0 chr1 35223745 . A . PASS END=35223753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:18,0 chr1 35226856 . A . PASS END=35226872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,997:0,87,255:31,0 chr1 35226873 . G . PASS END=35226873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 35226874 . C . PASS END=35226999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1157:0,82,255:40,0 chr1 35227000 . A . PASS END=35227000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1156:0,71,255:32,0 chr1 35227001 . A . PASS END=35227039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1169:0,80,255:35,0 chr1 35227040 . A . PASS END=35227040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 35227041 . C . PASS END=35227044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 35227045 . T . PASS END=35227052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 35227053 . C . PASS END=35227068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 35227069 . T . PASS END=35227132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr1 35227133 . T . PASS END=35227152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 35227153 . G . PASS END=35227169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 35227170 . C . PASS END=35227172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 35227173 . C . PASS END=35227174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35227175 . T . PASS END=35227175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 35227176 . G . PASS END=35227188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 35227189 . A . PASS END=35227192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 35227193 . C . PASS END=35227193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35227194 . C . PASS END=35227194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 35227195 . C . PASS END=35227226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,65,255:26,0 chr1 35227227 . G . PASS END=35227294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1092:0,80,255:34,0 chr1 35227295 . A . PASS END=35227299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 35227300 . T . PASS END=35227307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:27,0 chr1 35227308 . C . PASS END=35227327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 35227328 . T . PASS END=35227328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr1 35227329 . G . PASS END=35227339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 35227340 . T . PASS END=35227354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr1 35227355 . A . PASS END=35227355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 35227356 . G . PASS END=35227358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:16,0 chr1 35227359 . T . PASS END=35227383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 35227384 . A . PASS END=35227384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 35227385 . T . PASS END=35227385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 35227386 . C . PASS END=35227400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,459:0,31,255:13,0 chr1 35227401 . G . PASS END=35227401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 35227402 . A . PASS END=35227402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 35227403 . A . PASS END=35227406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 35227407 . G . PASS END=35227417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 35227418 . A . PASS END=35227440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:25,0 chr1 35227441 . A . PASS END=35227441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 35227442 . T . PASS END=35227453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,900:0,72,255:25,0 chr1 35227454 . T . PASS END=35227454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 35227455 . C . PASS END=35227469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,909:0,75,255:25,0 chr1 35227470 . C . PASS END=35227471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35227472 . T . PASS END=35227472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 35227473 . C . PASS END=35227475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35227476 . C . PASS END=35227482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 35227483 . G . PASS END=35227488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 35227489 . A . PASS END=35227489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 35227490 . G . PASS END=35227492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 35227493 . G . PASS END=35227493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 35227494 . C . PASS END=35227500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 35227501 . A . PASS END=35227512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 35227513 . A . PASS END=35227554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1102:0,80,255:35,0 chr1 35227555 . T . PASS END=35227555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:31,0 chr1 35227556 . G . PASS END=35227576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1215:0,98,255:35,0 chr1 35227577 . A . PASS END=35227577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1246:0,75,255:34,0 chr1 35227578 . G . PASS END=35227656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1294:0,89,255:40,0 chr1 35246799 . T . PASS END=35246799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 35246925 . G . PASS END=35246925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 35246928 . T . PASS END=35246928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 35247006 . G . PASS END=35247007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr1 35247022 . G . PASS END=35247022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 35247098 . T . PASS END=35247098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 35247112 . C . PASS END=35247112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 35247120 . C . PASS END=35247120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 35247174 . G . PASS END=35247174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 35247228 . G . PASS END=35247228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 35247246 . T . PASS END=35247246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 35247255 . C . PASS END=35247255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 35247312 . C . PASS END=35247312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 35247335 . C . PASS END=35247335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 35250360 . C . PASS END=35250360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 35250364 . A . PASS END=35250366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,643:0,40,255:18,0 chr1 35250367 . G . PASS END=35250378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:25,0 chr1 35250379 . C . PASS END=35250379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 35250380 . T . PASS END=35250380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 35250381 . C . PASS END=35250381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 35250382 . C . PASS END=35250382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 35250383 . A . PASS END=35250582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1125:0,80,255:40,0 chr1 35250583 . A . PASS END=35250583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1183:0,77,255:30,0 chr1 35250584 . T . PASS END=35250655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1149:0,80,255:36,0 chr1 35250656 . G . PASS END=35250656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 35250657 . T . PASS END=35250659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 35250660 . G . PASS END=35250660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:32,0 chr1 35250661 . G . PASS END=35250682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1335:0,96,255:38,0 chr1 35250683 . A . PASS END=35250719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:38:0,98,1333:0,98,255:40,0 chr1 35250720 . C T, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=4.344;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,29,0:0.580,0.000:50:6,12,0:15,17,0:47:85,0,48,943,743,1685:255,0,255:21,0:5.0000e+01,7.7400e-05,5.1061e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,15,14:11,10,18,11 chr1 35250721 . G . PASS END=35250757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,134,255:40,0 chr1 35250758 . T . PASS END=35250966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1355:0,81,255:40,0 chr1 35250967 . A . PASS END=35250967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:30,0 chr1 35250968 . C . PASS END=35250969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 35250970 . A . PASS END=35250970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1105:0,75,255:27,0 chr1 35250971 . T . PASS END=35250977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:33:0,84,1260:0,91,255:29,0 chr1 35250978 . G . PASS END=35250980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 35250981 . C . PASS END=35250984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 35250985 . T . PASS END=35250985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 35250986 . A . PASS END=35250991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr1 35250992 . T . PASS END=35250997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,972:0,70,255:27,0 chr1 35250998 . A . PASS END=35251000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 35251001 . G . PASS END=35251009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,73,255:23,0 chr1 35251010 . G . PASS END=35251010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:22,0 chr1 35251011 . A . PASS END=35251046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,907:0,62,255:26,0 chr1 35251047 . C . PASS END=35251058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr1 35251059 . C . PASS END=35251062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 35251063 . A . PASS END=35251066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 35251067 . G . PASS END=35251067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 35251068 . A . PASS END=35251092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 35251093 . A . PASS END=35251094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr1 35251095 . G . PASS END=35251146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1074:0,82,255:39,0 chr1 35251147 . G . PASS END=35251147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 35251148 . C . PASS END=35251176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1241:0,86,255:36,0 chr1 35251250 . C . PASS END=35251250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 35251256 . G . PASS END=35251256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1196:0,96,255:32,0 chr1 35251296 . C . PASS END=35251296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 35251348 . G . PASS END=35251348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 35251367 . C . PASS END=35251367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:18,0 chr1 35251482 . C . PASS END=35251482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 35251546 . C . PASS END=35251546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 35251605 . G . PASS END=35251605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 35251657 . C . PASS END=35251657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 35251706 . T . PASS END=35251706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 35251717 . G . PASS END=35251717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 35251846 . C . PASS END=35251846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 35259815 . A . PASS END=35259819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 35259820 . T . PASS END=35259820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 35259821 . G . PASS END=35259832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 35259833 . C . PASS END=35259833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 35259834 . T . PASS END=35259844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:24,0 chr1 35259845 . C . PASS END=35259846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 35259847 . G . PASS END=35259852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr1 35259853 . G . PASS END=35259853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 35259854 . G . PASS END=35259857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 35259858 . A . PASS END=35259858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:24,0 chr1 35259859 . G . PASS END=35259864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 35259865 . C . PASS END=35259865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35259866 . T . PASS END=35259868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 35259869 . A . PASS END=35259875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 35259876 . T . PASS END=35259905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 35259906 . T . PASS END=35259906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 35259907 . C . PASS END=35259911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35259912 . G . PASS END=35259912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 35259913 . C . PASS END=35259914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35259915 . T . PASS END=35259923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr1 35259924 . T . PASS END=35259960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:19,0 chr1 35259961 . A G, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=1.755;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:5,5,0:4,5,0:48:85,0,50,358,322,680:255,0,255:9,0:5.0000e+01,6.5751e-05,5.2887e+01,3.5764e+02,3.5667e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,7,3:2,7,6,4 chr1 35259962 . T . PASS END=35259979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 35259980 . A . PASS END=35259980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 35259981 . C . PASS END=35259987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 35259988 . G . PASS END=35259998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 35259999 . C . PASS END=35260036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 35260037 . A . PASS END=35260041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,582:0,48,255:19,0 chr1 35260042 . C . PASS END=35260097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:27,0 chr1 35260098 . A . PASS END=35260098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35260099 . T . PASS END=35260104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:65:30:0,65,1078:0,65,255:29,0 chr1 35260105 . T . PASS END=35260105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 35260106 . T . PASS END=35260107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 35260108 . C . PASS END=35260108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 35260109 . C . PASS END=35260110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 35260111 . G . PASS END=35260115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1033:0,63,255:28,0 chr1 35260116 . G . PASS END=35260118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 35260119 . G . PASS END=35260122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1025:0,62,255:30,0 chr1 35260123 . A . PASS END=35260123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 35260124 . G . PASS END=35260127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,940:0,60,255:30,0 chr1 35260128 . G . PASS END=35260128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr1 35260129 . G . PASS END=35260131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1169:0,80,255:31,0 chr1 35260132 . G . PASS END=35260134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr1 35260135 . G . PASS END=35260136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 35260137 . A . PASS END=35260138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:30,0 chr1 35260139 . A . PASS END=35260140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:30,0 chr1 35260141 . G . PASS END=35260141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 35260142 . G . PASS END=35260142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 35260143 . A . PASS END=35260143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 35260144 . G . PASS END=35260148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1185:0,80,255:28,0 chr1 35260149 . A . PASS END=35260149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 35260150 . G . PASS END=35260152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:30,0 chr1 35260153 . G . PASS END=35260153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:22:33:0,22,1124:0,22,255:29,0 chr1 35260154 . C . PASS END=35260154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1224:0,83,255:30,0 chr1 35260155 . G . PASS END=35260155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr1 35260156 . G . PASS END=35260159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 35260160 . C . PASS END=35260160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:29,0 chr1 35260161 . T . PASS END=35260161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:28,0 chr1 35260162 . G . PASS END=35260162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr1 35260163 . C . PASS END=35260168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1185:0,80,255:30,0 chr1 35260169 . A . PASS END=35260169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 35260170 . A . PASS END=35260177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 35260178 . C . PASS END=35260179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 35260180 . G . PASS END=35260181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 35260182 . T . PASS END=35260183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:31:0,75,1125:0,83,255:26,0 chr1 35260184 . G . PASS END=35260184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 35260185 . A . PASS END=35260186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 35260187 . C . PASS END=35260196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:29,0 chr1 35260197 . C . PASS END=35260198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 35260199 . G . PASS END=35260239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1141:0,82,255:33,0 chr1 35260240 . T . PASS END=35260240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 35260241 . G . PASS END=35260246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 35260247 . C . PASS END=35260247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:27,0 chr1 35260248 . T . PASS END=35260284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1072:0,87,255:32,0 chr1 35260285 . C . PASS END=35260288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:32,0 chr1 35260289 . G . PASS END=35260318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:33,0 chr1 35260319 . T . PASS END=35260320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 35260321 . C . PASS END=35260323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 35260324 . C . PASS END=35260339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1078:0,74,255:25,0 chr1 35260340 . C . PASS END=35260340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:23,0 chr1 35260341 . T . PASS END=35260436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,945:0,62,255:26,0 chr1 35260437 . T . PASS END=35260437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:23,0 chr1 35260438 . C . PASS END=35260439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr1 35260440 . T . PASS END=35260440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 35260441 . C . PASS END=35260442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 35260443 . T . PASS END=35260443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 35260444 . C . PASS END=35260447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr1 35260448 . T . PASS END=35260448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:23,0 chr1 35260449 . T . PASS END=35260451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 35260452 . T . PASS END=35260452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 35260453 . G . PASS END=35260460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,908:0,61,255:23,0 chr1 35260461 . T . PASS END=35260461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 35260462 . T . PASS END=35260475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 35260476 . T . PASS END=35260497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,704:0,44,255:19,0 chr1 35260498 . G . PASS END=35260498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 35260499 . G . PASS END=35260510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,714:0,54,255:19,0 chr1 35260511 . T . PASS END=35260513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 35260514 . C . PASS END=35260514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 35260515 . G . PASS END=35260516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 35260517 . T . PASS END=35260518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 35260519 . C . PASS END=35260521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35260522 . C . PASS END=35260572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 35260573 . C . PASS END=35260616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,299:0,30,255:13,0 chr1 35260617 . C . PASS END=35260617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 35260618 . C . PASS END=35260619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 35260620 . T . PASS END=35260621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 35260622 . G . PASS END=35260622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 35260623 . G . PASS END=35260636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 35260637 . T . PASS END=35260637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 35260638 . C . PASS END=35260648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 35260649 . C . PASS END=35260649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 35260650 . C . PASS END=35260650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 35260651 . C . PASS END=35260651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 35260652 . A . PASS END=35260665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 35260666 . C . PASS END=35260668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 35260669 . A . PASS END=35260669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 35260670 . T . PASS END=35260671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 35260672 . C . PASS END=35260672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 35260673 . A . PASS END=35260676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 35260677 . A . PASS END=35260677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,351:0,5,255:9,0 chr1 35260678 . G . PASS END=35260680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 35260681 . G . PASS END=35260681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 35260682 . A . PASS END=35260685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:10:0,20,386:0,20,255:9,0 chr1 35260686 . G . PASS END=35260686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 35260687 . G . PASS END=35260692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 35260693 . C . PASS END=35260693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 35260694 . C . LowGQ END=35260694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,261:3,0,255:7,0 chr1 35260695 . T . PASS END=35260696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 35260697 . A . PASS END=35260697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 35260698 . C . PASS END=35260704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 35260705 . G . PASS END=35260717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 35260718 . T . PASS END=35260718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 35260719 . C . PASS END=35260723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 35260724 . A . PASS END=35260729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 35260730 . C . PASS END=35260730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 35260731 . C . PASS END=35260731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 35260732 . T . LowGQ END=35260732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,278:0,0,255:7,0 chr1 35260733 . C . PASS END=35260734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 35260735 . C . PASS END=35260740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 35260741 . G . PASS END=35260745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 35260746 . C . PASS END=35260746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 35260747 . A . PASS END=35260749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 35260750 . C . PASS END=35260750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 35260751 . C . PASS END=35260752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 35260753 . T . PASS END=35260753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,303:0,16,255:10,0 chr1 35260754 . C . PASS END=35260756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,337:0,33,255:11,0 chr1 35260757 . A . PASS END=35260757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr1 35260758 . A . PASS END=35260766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,329:0,33,255:11,0 chr1 35260767 . A . PASS END=35260767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 35260768 . A . PASS END=35260773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 35260774 . A . PASS END=35260774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,252:0,16,252:10,0 chr1 35260775 . A . PASS END=35260775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,372:0,33,255:11,0 chr1 35260776 . G . LowGQ END=35260776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,294:0,0,255:9,0 chr1 35260777 . T . PASS END=35260777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 35260778 . C T, 0.01 DRAGENSnpHardQUAL DP=11;MQ=250.00;MQRankSum=1.423;ReadPosRankSum=1.423;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:5,0,0:5,1,0:29:6,0,50,36,313,348:22,0,255:9,0:6.0048e-03,2.8597e+01,8.1597e+01,6.4405e+01,3.7603e+02,3.8007e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,1,0:7,3,0,1 chr1 35260779 . G . PASS END=35260781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,372:0,33,255:11,0 chr1 35260782 . C . PASS END=35260782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 35260783 . C . PASS END=35260783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 35260784 . A . LowGQ END=35260784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:9,0 chr1 35260785 . G . PASS END=35260787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,344:0,33,255:11,0 chr1 35260788 . G . PASS END=35260788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 35260789 . C . PASS END=35260796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 35260797 . C . PASS END=35260797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 35260798 . T . PASS END=35260802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 35260803 . A . LowGQ END=35260803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:8,0 chr1 35260804 . G . PASS END=35260804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 35260805 . C . PASS END=35260808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 35260809 . A . PASS END=35260815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,270:0,13,255:6,0 chr1 35260816 . G . PASS END=35260816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 35320718 . T . PASS END=35321002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:33:0,87,1211:0,88,255:40,0 chr1 35321003 . A . PASS END=35321003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:25,0 chr1 35321004 . G . PASS END=35321007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1141:0,82,255:28,0 chr1 35321008 . G . PASS END=35321008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:26,0 chr1 35321009 . A . PASS END=35321009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 35321010 . C . PASS END=35321011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 35321012 . G . PASS END=35321015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 35321016 . A . PASS END=35321016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1021:0,79,255:28,0 chr1 35321017 . T . PASS END=35321021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 35321022 . A . PASS END=35321022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:26,0 chr1 35321023 . T . PASS END=35321023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35321024 . C . PASS END=35321024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 35321025 . T . PASS END=35321027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 35321028 . T . PASS END=35321029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 35321030 . A . PASS END=35321053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1172:0,83,255:31,0 chr1 35321054 . T . PASS END=35321054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 35321055 . A . PASS END=35321058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 35321059 . T . PASS END=35321059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr1 35321060 . C . PASS END=35321062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,991:0,87,255:29,0 chr1 35321063 . A . PASS END=35321063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 35321064 . T . PASS END=35321064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35321065 . G . PASS END=35321065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 35321066 . C . PASS END=35321071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 35321072 . T . PASS END=35321100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,955:0,63,255:26,0 chr1 35321101 . C . PASS END=35321131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1003:0,84,255:31,0 chr1 35321132 . T . PASS END=35321132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 35321133 . G . PASS END=35321136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 35321137 . C . PASS END=35321137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 35321138 . T . PASS END=35321177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1070:0,80,255:30,0 chr1 35321178 . G . PASS END=35321180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 35321181 . G . PASS END=35321218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr1 35321219 . A . PASS END=35321219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 35321220 . T . PASS END=35321223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 35321224 . G . PASS END=35321224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 35321225 . G . PASS END=35321226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 35321227 . T . PASS END=35321227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 35321228 . C . PASS END=35321281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1185:0,80,255:34,0 chr1 35321300 . T . PASS END=35321324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1217:0,86,255:34,0 chr1 35321325 . T . PASS END=35321325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:33,0 chr1 35321326 . T . PASS END=35321583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:33:0,93,1227:0,95,255:40,0 chr1 35322787 . T . PASS END=35322789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr1 35322790 . G . PASS END=35322790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 35322791 . G . PASS END=35322791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 35322792 . A . PASS END=35322792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 35322793 . T . PASS END=35322793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr1 35322794 . A . PASS END=35322794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 35322795 . C . PASS END=35322801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,617:0,40,255:19,0 chr1 35322802 . A . PASS END=35322802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,549:0,7,255:16,0 chr1 35322803 . C . PASS END=35322806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 35322807 . A . PASS END=35322807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 35322808 . A . PASS END=35322809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:18,0 chr1 35322810 . A . LowGQ END=35322810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,444:34,0,255:17,0 chr1 35322811 . T . PASS END=35322811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 35322812 . T . PASS END=35322812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:19,0 chr1 35322813 . T . PASS END=35322813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 35322814 . T . PASS END=35322814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 35322815 . C . LowGQ END=35322815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,432:51,0,255:15,0 chr1 35322816 . T . PASS END=35322816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 35322817 . G . LowGQ END=35322817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,473:43,0,255:16,0 chr1 35322818 . T . PASS END=35322818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 35322819 . G . LowGQ END=35322819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,504:40,0,255:17,0 chr1 35322820 . A . PASS END=35322820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 35322821 . A . PASS END=35322821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,578:0,10,255:17,0 chr1 35322822 . A . PASS END=35322824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr1 35322825 . T . PASS END=35322825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,604:0,5,255:18,0 chr1 35322826 . C . PASS END=35322826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:18,0 chr1 35322827 . A . PASS END=35322827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,553:0,12,255:18,0 chr1 35322828 . C . PASS END=35322828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,596:0,5,255:18,0 chr1 35322829 . T . PASS END=35322829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 35322830 . G . LowGQ END=35322832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,455:0,0,255:18,0 chr1 35322833 . C . PASS END=35322833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,583:0,35,255:21,0 chr1 35322834 . A . LowGQ END=35322836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,6:25:0:22:0,0,532:28,0,255:21,0 chr1 35322837 . C . PASS END=35322837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,740:0,34,255:25,0 chr1 35322838 . C . LowGQ END=35322839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,6:28:0:28:0,0,493:65,0,255:23,0 chr1 35322840 . G . PASS END=35322840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:27,0 chr1 35322841 . G . PASS END=35322841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,1 chr1 35322842 . G . LowGQ END=35322842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:29:0,0,865:3,0,255:25,1 chr1 35322843 . G . PASS END=35322843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:45:32:0,45,1058:0,45,255:29,1 chr1 35322844 . G . PASS END=35322844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:32:0,61,1068:0,61,255:30,1 chr1 35322845 . G . PASS END=35322845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:45:32:0,45,1066:0,45,255:29,1 chr1 35322846 . T . LowGQ END=35322846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,12:32:0:32:0,0,191:255,0,255:19,1 chr1 35322847 . G . PASS END=35322850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:32,0 chr1 35322851 . T . LowGQ END=35322851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,14:33:0:33:0,0,164:255,0,255:18,0 chr1 35322852 . G . PASS END=35322855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1144:0,96,255:33,0 chr1 35322856 . T . LowGQ END=35322856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,11:33:0:33:0,0,374:245,0,255:22,1 chr1 35322857 . G . PASS END=35322857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:33,0 chr1 35322858 . G . PASS END=35322860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1189:0,102,255:34,0 chr1 35322861 . T . LowGQ END=35322861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,11:34:0:34:0,0,481:220,0,255:22,0 chr1 35322862 . G . PASS END=35322864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1231:0,89,255:34,0 chr1 35322865 . G . PASS END=35322865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,997:0,41,255:32,0 chr1 35322866 . C . LowGQ END=35322866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,9:35:0:35:0,0,637:125,0,255:24,0 chr1 35322867 . G . PASS END=35322869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1189:0,88,255:32,0 chr1 35322870 . G . PASS END=35322870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1046:0,71,255:30,0 chr1 35322871 . A . PASS END=35322883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1133:0,82,255:34,0 chr1 35322884 . G . PASS END=35322884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr1 35322885 . G . PASS END=35322901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1164:0,85,255:33,0 chr1 35322902 . A . PASS END=35322902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1050:0,46,255:32,0 chr1 35322903 . T . PASS END=35322906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1227:0,88,255:34,0 chr1 35322907 . A . PASS END=35322949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:35:0,80,1258:0,80,255:35,0 chr1 35322950 . C . PASS END=35322961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:23:0,63,945:0,69,255:23,0 chr1 35322962 . C . PASS END=35322967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 35322968 . C . PASS END=35322970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35331684 . T . PASS END=35331684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 35331685 . C . PASS END=35331694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr1 35331695 . T . PASS END=35331695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,192:0,4,192:6,0 chr1 35331696 . C . PASS END=35331700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 35331701 . C . LowGQ END=35331701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:6,0 chr1 35331702 . C . PASS END=35331709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 35331710 . T . PASS END=35331710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 35331711 . G . PASS END=35331721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 35331722 . T G, 0.04 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=0.889;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:4,1,0:3,0,0:20:15,0,50,39,245,317:12,0,255:8,0:4.2402e-02,2.0126e+01,7.3126e+01,5.8887e+01,3.0026e+02,3.3999e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,0,1:6,1,0,1 chr1 35331723 . G . PASS END=35331724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 35331725 . T . PASS END=35331725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 35331726 . G . PASS END=35331726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 35331727 . T . LowGQ END=35331727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:7,0 chr1 35331728 . C . PASS END=35331733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 35331734 . T . PASS END=35331734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 35331735 . C . PASS END=35331739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 35331740 . T . PASS END=35331740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 35331741 . G . PASS END=35331742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 35331743 . C . PASS END=35331747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 35331748 . C . PASS END=35331748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 35331749 . T . PASS END=35331753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 35331754 . C . PASS END=35331754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 35331755 . G . PASS END=35331755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 35331756 . G . PASS END=35331756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 35331757 . A . PASS END=35331757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 35331758 . A . PASS END=35331758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 35331759 . G . PASS END=35331759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 35331760 . G . PASS END=35331760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 35331761 . A . PASS END=35331810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,303:0,27,255:9,0 chr1 35331811 . C . PASS END=35331811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 35331812 . G . PASS END=35331819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 35331820 . G . PASS END=35331820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 35331821 . A . PASS END=35331824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 35331825 . C . PASS END=35331825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr1 35331826 . A . PASS END=35331827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 35331828 . G . PASS END=35331828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 35331829 . G . PASS END=35331840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,27,255:9,0 chr1 35331841 . A . PASS END=35331843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 35331844 . G . PASS END=35331844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:4,0 chr1 35331845 . G . PASS END=35331851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr1 35331852 . C . PASS END=35331852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 35331853 . C . PASS END=35331863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 35331864 . G . PASS END=35331864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 35331865 . G . PASS END=35331866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 35331867 . C . PASS END=35331867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,161:0,1,161:5,0 chr1 35331868 . T . PASS END=35331869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 35331870 . C . PASS END=35331870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:5,0 chr1 35331871 . T . PASS END=35331902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 35332649 . C . PASS END=35332652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1236:0,92,255:36,0 chr1 35332653 . G . PASS END=35332653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 35332654 . G . PASS END=35332772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,88,255:40,0 chr1 35332773 . A . PASS END=35332789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,67,255:25,0 chr1 35332790 . A . PASS END=35332790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr1 35332791 . T . PASS END=35332792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 35333137 . C . PASS END=35333138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 35333139 . T . PASS END=35333139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 35333140 . G . PASS END=35333140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35333141 . C . PASS END=35333141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 35333142 . T . PASS END=35333174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1166:0,83,255:33,0 chr1 35333175 . T . PASS END=35333175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1178:0,69,255:29,0 chr1 35333176 . C . PASS END=35333185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1164:0,83,255:29,0 chr1 35333186 . A . PASS END=35333186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1019:0,51,255:27,0 chr1 35333187 . G . PASS END=35333188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 35333189 . A . PASS END=35333189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 35333190 . G . PASS END=35333190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35333191 . T . PASS END=35333191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 35333192 . T . PASS END=35333195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 35333196 . T . PASS END=35333206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 35333207 . G . PASS END=35333228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:19,0 chr1 35334206 . T . PASS END=35334210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:12,0 chr1 35334211 . T . PASS END=35334211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 35334212 . C . PASS END=35334213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 35334214 . G . PASS END=35334214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 35334215 . G . PASS END=35334217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 35334218 . G . PASS END=35334218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 35334219 . C . PASS END=35334220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 35334221 . C . PASS END=35334221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 35334222 . A . PASS END=35334224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 35334225 . G . PASS END=35334225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 35334226 . T . PASS END=35334226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,437:0,6,255:14,0 chr1 35334227 . C . PASS END=35334233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 35334234 . C . PASS END=35334238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 35334239 . G . PASS END=35334239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 35334240 . C . PASS END=35334244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 35334245 . T . PASS END=35334245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 35334246 . C . PASS END=35334248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 35334249 . C . PASS END=35334249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 35334250 . T . PASS END=35334250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 35334251 . G . PASS END=35334254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 35334255 . C . PASS END=35334256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 35334257 . A . PASS END=35334268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:15:0,35,540:0,35,255:13,0 chr1 35334269 . T . PASS END=35334269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 35334270 . C . PASS END=35334271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,559:0,34,255:13,0 chr1 35334272 . C . PASS END=35334280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 35334281 . C . PASS END=35334281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr1 35334282 . C . PASS END=35334283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 35334284 . G . PASS END=35334284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 35334285 . C . PASS END=35334287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 35334288 . C . PASS END=35334288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 35334289 . A . PASS END=35334289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 35334290 . T . PASS END=35334290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 35334291 . C . PASS END=35334291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 35334292 . T . PASS END=35334293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 35334294 . G . PASS END=35334297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 35334298 . A . PASS END=35334299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 35334300 . C . PASS END=35334303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 35334304 . T . PASS END=35334304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,473:0,1,255:14,0 chr1 35334305 . C . PASS END=35334307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,529:0,48,255:16,0 chr1 35334308 . C . PASS END=35334308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 35334309 . G . PASS END=35334309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 35334310 . T . PASS END=35334310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 35334311 . C . PASS END=35334312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 35334313 . C . PASS END=35334313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 35334314 . G . PASS END=35334318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:18,0 chr1 35334319 . C . PASS END=35334320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,498:0,21,255:17,0 chr1 35334321 . G . PASS END=35334325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 35334326 . A . PASS END=35334326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:16,0 chr1 35334327 . T . PASS END=35334330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,582:0,40,255:18,0 chr1 35334331 . C . PASS END=35334331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:19,0 chr1 35334332 . G . PASS END=35334333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 35334334 . C . PASS END=35334334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:19,0 chr1 35334335 . C . PASS END=35334335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:19,0 chr1 35334336 . T . PASS END=35334338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:19,0 chr1 35334339 . G . PASS END=35334339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35334340 . T . PASS END=35334340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:19,0 chr1 35334341 . C . PASS END=35334343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 35334344 . G . PASS END=35334344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:17,0 chr1 35334345 . G . PASS END=35334346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 35334347 . G . PASS END=35334349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 35334350 . T . PASS END=35334353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,762:0,55,255:23,0 chr1 35334354 . T . PASS END=35334355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,834:0,72,255:25,0 chr1 35334356 . A . PASS END=35334357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,750:0,58,255:24,0 chr1 35334358 . C . PASS END=35334358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 35334359 . C . PASS END=35334360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,738:0,42,255:23,0 chr1 35334361 . C . PASS END=35334361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 35334362 . G . PASS END=35334364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,809:0,42,255:25,0 chr1 35334365 . C . PASS END=35334365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 35334366 . T . PASS END=35334366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,858:0,34,255:26,0 chr1 35334367 . A . PASS END=35334386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1069:0,85,255:34,0 chr1 35334387 . G . PASS END=35334387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1145:0,69,255:31,0 chr1 35334388 . G . PASS END=35334392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1148:0,83,255:33,0 chr1 35334393 . A . PASS END=35334395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,924:0,68,255:31,0 chr1 35334396 . G . PASS END=35334403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,104,255:33,0 chr1 35334404 . T . PASS END=35334404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1094:0,77,255:32,0 chr1 35334405 . G . PASS END=35334409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:34,0 chr1 35334410 . C . PASS END=35334410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1109:0,58,255:32,0 chr1 35334411 . G . PASS END=35334411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 35334412 . G . PASS END=35334412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:33,0 chr1 35334413 . G . PASS END=35334416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:35,0 chr1 35334417 . A . PASS END=35334417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1185:0,36,255:32,0 chr1 35334418 . G . PASS END=35334475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,95,255:38,0 chr1 35334476 . A . PASS END=35334488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 35334489 . C . PASS END=35334489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35334490 . T . PASS END=35334502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:24,0 chr1 35334503 . T . PASS END=35334503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 35334504 . G . PASS END=35334506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 35334507 . G . PASS END=35334510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 35334511 . A . PASS END=35334511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,715:0,35,255:17,0 chr1 35334512 . C . PASS END=35334517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 35334518 . A . PASS END=35334541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 35334542 . G . PASS END=35334542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 35334543 . G . PASS END=35334559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 35334560 . T . PASS END=35334560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 35334561 . C . PASS END=35334569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 35334570 . G . PASS END=35334570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 35334571 . C . PASS END=35334574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 35334575 . C . PASS END=35334576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 35334577 . A . PASS END=35334591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 35334592 . T . PASS END=35334592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 35334593 . C . PASS END=35334594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35334595 . T . PASS END=35334595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 35334596 . C . PASS END=35334596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35334597 . T . PASS END=35334604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 35334605 . C . PASS END=35334608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 35334609 . G . PASS END=35334637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,621:0,40,255:19,0 chr1 35334638 . G . PASS END=35334638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr1 35334639 . G . PASS END=35334646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr1 35334647 . G . PASS END=35334647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 35334648 . C . PASS END=35334652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 35334653 . C . PASS END=35334653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 35334654 . A . PASS END=35334655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 35334656 . C . PASS END=35334656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 35334657 . C . PASS END=35334663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,590:0,51,255:17,0 chr1 35334664 . C . PASS END=35334664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 35334665 . T . PASS END=35334665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:11,0 chr1 35334666 . A . PASS END=35334666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 35334667 . T . PASS END=35334667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:11,0 chr1 35334668 . T . PASS END=35334674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 35334675 . C . PASS END=35334675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 35334676 . T . PASS END=35334676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 35334677 . T . PASS END=35334677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 35334678 . G . PASS END=35334679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 35334680 . A . PASS END=35334680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 35334681 . C . PASS END=35334683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 35334684 . T . PASS END=35334684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 35334685 . G . PASS END=35334687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 35334688 . C . PASS END=35334690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 35350579 . C . PASS END=35350664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:33:0,99,1189:0,99,255:40,0 chr1 35351079 . C . PASS END=35351089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 35351090 . T . PASS END=35351090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 35351091 . G . PASS END=35351141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr1 35351142 . A . PASS END=35351142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 35351143 . G . PASS END=35351155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 35351156 . T . PASS END=35351179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 35351180 . T . PASS END=35351186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,32,255:11,0 chr1 35351187 . G . PASS END=35351191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:13:0,27,405:0,39,255:9,0 chr1 35351192 . G . PASS END=35351213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 35351214 . G . PASS END=35351216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 35351217 . C . PASS END=35351220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 35351221 . C . PASS END=35351252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:19,0 chr1 35351253 . G . PASS END=35351253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:17,0 chr1 35351254 . C . PASS END=35351300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,590:0,45,255:18,0 chr1 35351301 . G . PASS END=35351306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 35351307 . G . PASS END=35351307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:10,0 chr1 35351308 . G . PASS END=35351315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr1 35351316 . C . PASS END=35351316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 35351317 . T . PASS END=35351317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 35351318 . G . PASS END=35351326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 35351327 . T . PASS END=35351331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 35351332 . A . PASS END=35351334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 35351335 . C . PASS END=35351335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:7,0 chr1 35351336 . G . PASS END=35351336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 35351337 . G . PASS END=35351364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,202:6,0 chr1 35351365 . G . PASS END=35351382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:3,0 chr1 35351383 . A . PASS END=35351392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,156:0,15,156:5,0 chr1 35351673 . A . PASS END=35351699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 35351700 . C . PASS END=35351700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:11,0 chr1 35351701 . A . PASS END=35351707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 35351708 . G . PASS END=35351715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr1 35351716 . G . PASS END=35351716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 35351717 . G . PASS END=35351730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr1 35351731 . G . PASS END=35351731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35351732 . T . PASS END=35351732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 35351733 . C . PASS END=35351799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,726:0,66,255:26,0 chr1 35351800 . G . PASS END=35351805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 35351806 . G . PASS END=35351806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 35351807 . G . PASS END=35351809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 35351810 . T . PASS END=35351810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 35351811 . C . PASS END=35351830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:29,0 chr1 35351831 . T . PASS END=35351832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 35351833 . C . PASS END=35351842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1031:0,81,255:27,0 chr1 35351843 . G . PASS END=35351863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:25,0 chr1 35351864 . T . PASS END=35351866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 35351867 . T . PASS END=35351886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,643:0,40,255:19,0 chr1 35365270 . C . PASS END=35365271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 35365272 . G . PASS END=35365283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr1 35365284 . G . PASS END=35365284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 35365285 . G . PASS END=35365303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1064:0,87,255:31,0 chr1 35365304 . A . PASS END=35365304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 35365305 . T . PASS END=35365314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr1 35365315 . G . PASS END=35365342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:26,0 chr1 35365669 . T . PASS END=35365678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:26,0 chr1 35365679 . C . PASS END=35365693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:30,0 chr1 35365694 . A . PASS END=35365695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 35365696 . G . PASS END=35365778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1142:0,83,255:37,0 chr1 35365779 . C . PASS END=35365781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1180:0,63,255:31,0 chr1 35365782 . G . PASS END=35365782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:30,0 chr1 35365783 . G . PASS END=35365784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr1 35365785 . T . PASS END=35365785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1065:0,63,255:30,0 chr1 35365786 . T . PASS END=35365786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 35365787 . T . PASS END=35365791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1209:0,64,255:31,0 chr1 35365792 . T . PASS END=35365792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 35365793 . A . PASS END=35365796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1141:0,60,255:29,0 chr1 35365797 . G . PASS END=35365797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:22:33:0,22,1124:0,22,255:28,0 chr1 35365798 . C . PASS END=35365800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:25,0 chr1 35365801 . C . PASS END=35365801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 35365802 . T . PASS END=35365802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr1 35365803 . C . PASS END=35365803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:25,0 chr1 35365804 . C . PASS END=35365804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:24,0 chr1 35365805 . G . PASS END=35365805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 35365806 . C . PASS END=35365806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:25,0 chr1 35365807 . A . PASS END=35365808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 35365809 . C . PASS END=35365809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:25,0 chr1 35365810 . C . PASS END=35365810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35365811 . T . PASS END=35365811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr1 35365812 . G . PASS END=35365812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35365813 . C . PASS END=35365813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 35365814 . G . PASS END=35365814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35365815 . G . PASS END=35365818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,980:0,45,255:25,0 chr1 35365819 . G . PASS END=35365828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:24,0 chr1 35365829 . C . PASS END=35365829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 35365830 . A . PASS END=35365832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 35365833 . C . PASS END=35365858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 35365859 . A . PASS END=35365859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 35365860 . G . PASS END=35365874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:15,0 chr1 35369878 . C . PASS END=35369895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,437:0,36,255:13,0 chr1 35369896 . C . PASS END=35369902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 35369903 . T . PASS END=35369903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 35369904 . T . PASS END=35369944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 35369945 . G . PASS END=35369947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,1 chr1 35369948 . C . PASS END=35369950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 35369951 . G . PASS END=35369960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 35369961 . C . PASS END=35369966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 35369967 . C . PASS END=35369967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 35369968 . C . PASS END=35369968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 35369969 . T . PASS END=35369969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:19,0 chr1 35369970 . G . PASS END=35369987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 35369988 . G . PASS END=35369988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 35369989 . C . PASS END=35370002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 35370003 . T . PASS END=35370003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 35370004 . G . PASS END=35370014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 35370015 . C . PASS END=35370015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:20,0 chr1 35370016 . A . PASS END=35370018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 35370019 . C . PASS END=35370019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 35370020 . A . PASS END=35370021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 35370022 . T . PASS END=35370022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 35370023 . G . PASS END=35370024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 35370025 . C . PASS END=35370025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 35370026 . A . PASS END=35370038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,61,255:24,0 chr1 35370039 . T . PASS END=35370042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 35370043 . G . PASS END=35370058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 35370059 . T . PASS END=35370059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 35370060 . C . PASS END=35370064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 35370065 . C . PASS END=35370070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:21:0,53,804:0,53,255:20,0 chr1 35370071 . G . PASS END=35370079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:21,0 chr1 35370080 . T . PASS END=35370080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:20,0 chr1 35370081 . T . PASS END=35370083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 35370084 . A . PASS END=35370090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr1 35370091 . G . PASS END=35370097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 35370098 . T . PASS END=35370098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 35370099 . A . PASS END=35370106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:25,0 chr1 35370107 . T . PASS END=35370107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,886:0,50,255:24,0 chr1 35370108 . C . PASS END=35370118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,909:0,65,255:26,0 chr1 35370119 . A . PASS END=35370120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35370121 . G . PASS END=35370121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 35370122 . C . PASS END=35370123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:29,0 chr1 35370124 . G . PASS END=35370124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 35370125 . A . PASS END=35370129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 35370130 . A . PASS END=35370130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 35370131 . C . PASS END=35370430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1194:0,81,255:40,0 chr1 35370431 . T . PASS END=35370431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:32,0 chr1 35370432 . G . PASS END=35370454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1148:0,83,255:34,0 chr1 35370455 . A . PASS END=35370457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 35370458 . G . PASS END=35370466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 35370467 . A . PASS END=35370480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 35370481 . G . PASS END=35370481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 35370482 . C . PASS END=35370488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 35370489 . T . PASS END=35370489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,746:0,55,255:21,0 chr1 35370490 . C . PASS END=35370490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 35370491 . T . PASS END=35370509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:19,0 chr1 35370510 . C . PASS END=35370510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:16,0 chr1 35370511 . A . PASS END=35370511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:17,0 chr1 35370512 . G . PASS END=35370512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:17,0 chr1 35370513 . T . PASS END=35370522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,688:0,44,255:19,0 chr1 35370523 . T . PASS END=35370523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,662:0,32,255:17,0 chr1 35370524 . G . PASS END=35370540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:17:0,42,630:0,43,255:19,0 chr1 35370541 . T . PASS END=35370541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:14,0 chr1 35370542 . G . PASS END=35370546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:18,0 chr1 35370547 . T . PASS END=35370547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,604:0,2,255:16,0 chr1 35370548 . G . PASS END=35370555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,635:0,40,255:18,0 chr1 35370556 . T . PASS END=35370556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr1 35370557 . C . PASS END=35370557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 35370558 . G . PASS END=35370558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 35370559 . C . PASS END=35370559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:16,0 chr1 35370560 . T . PASS END=35370560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,604:0,10,255:16,0 chr1 35370561 . G . PASS END=35370561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:15,0 chr1 35370562 . G . PASS END=35370562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 35370563 . T . PASS END=35370563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:17,0 chr1 35370564 . A . PASS END=35370571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,729:0,49,255:19,0 chr1 35370572 . G . PASS END=35370573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 35370574 . G . PASS END=35370574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 35370575 . T . PASS END=35370577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35370578 . A . PASS END=35370578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 35370579 . A . PASS END=35370583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 35370584 . T . PASS END=35370584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,660:0,49,255:21,0 chr1 35370585 . C . PASS END=35370595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 35370596 . G . PASS END=35370596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 35370597 . G . PASS END=35370601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 35370602 . T . PASS END=35370602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 35370603 . G . PASS END=35370605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 35370606 . T . PASS END=35370607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,737:0,49,255:21,0 chr1 35370608 . T . PASS END=35370623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,748:0,66,255:23,0 chr1 35370624 . G . PASS END=35370624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 35370625 . T . PASS END=35370631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 35370632 . G . PASS END=35370632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 35370633 . G . PASS END=35370633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 35370634 . C . PASS END=35370634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 35370635 . A . PASS END=35370638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 35370639 . G . PASS END=35370639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 35370640 . G . PASS END=35370643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 35370644 . G . PASS END=35370650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,714:0,46,255:17,0 chr1 35370651 . T . PASS END=35370651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:16,0 chr1 35370652 . G . PASS END=35370667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,613:0,41,255:18,0 chr1 35370668 . A . PASS END=35370670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 35370671 . C . PASS END=35370678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,630:0,41,255:16,0 chr1 35370679 . A . PASS END=35370679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:15,0 chr1 35370680 . C . PASS END=35370685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,47,255:15,0 chr1 35370686 . T . PASS END=35370698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:13:0,34,540:0,34,255:13,0 chr1 35370699 . G . PASS END=35370702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 35370703 . A . PASS END=35370705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,565:0,32,255:13,0 chr1 35370706 . G . PASS END=35370712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 35370713 . C . PASS END=35370727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,437:0,39,255:13,0 chr1 35370728 . C . PASS END=35370728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 35370729 . T . PASS END=35370749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 35370750 . C . PASS END=35370750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 35370751 . C . PASS END=35370751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 35370752 . G . PASS END=35370755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 35370756 . G . PASS END=35370775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 35370776 . G . PASS END=35370776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:11,0 chr1 35370777 . A . PASS END=35370779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,402:0,33,255:11,0 chr1 35370780 . G . PASS END=35370780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 35370781 . C . PASS END=35370787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:13,0 chr1 35370788 . C . PASS END=35370790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 35370791 . A . PASS END=35370791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 35370792 . G . PASS END=35370811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:16,0 chr1 35370812 . G . PASS END=35370812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 35370813 . A . PASS END=35370813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 35370814 . A . PASS END=35370814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 35370815 . A . PASS END=35370817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 35370818 . T . PASS END=35370820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:16:0,35,585:0,35,255:13,0 chr1 35370821 . C . PASS END=35370822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 35370823 . C . PASS END=35370824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:15,0 chr1 35370825 . G . PASS END=35370828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 35370829 . A . PASS END=35370829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 35370830 . G . PASS END=35370830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 35370831 . C . PASS END=35370834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 35370835 . C . PASS END=35370835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,473:0,1,255:14,0 chr1 35370836 . G . PASS END=35370842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr1 35370843 . A . PASS END=35370843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr1 35370844 . G . PASS END=35370845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 35370846 . A . PASS END=35370846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 35370847 . G . PASS END=35370847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 35370848 . C . LowGQ END=35370848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,459:4,0,255:12,0 chr1 35370849 . G . PASS END=35370852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 35370853 . C . PASS END=35370854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 35370855 . C . PASS END=35370855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 35370856 . G . PASS END=35370856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 35370857 . G . PASS END=35370857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 35370858 . T . PASS END=35370863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,599:0,40,255:19,0 chr1 35370864 . A . PASS END=35370864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:17,0 chr1 35370865 . G . PASS END=35370865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 35370866 . G . PASS END=35370866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr1 35370867 . C . PASS END=35370868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:19,0 chr1 35370869 . T . PASS END=35370869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:17,0 chr1 35370870 . C . PASS END=35370871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 35370872 . C . LowGQ END=35370872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,496:15,0,255:16,0 chr1 35370873 . T . PASS END=35370875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,540:0,40,255:19,0 chr1 35370876 . A . PASS END=35370876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:17,0 chr1 35370877 . G . PASS END=35370880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,584:0,40,255:18,0 chr1 35370881 . A . PASS END=35370882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:19:0,21,519:0,21,255:18,0 chr1 35370883 . C . PASS END=35370883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,558:0,2,255:15,0 chr1 35370884 . A . PASS END=35370884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,504:0,10,255:15,0 chr1 35370885 . G . PASS END=35370885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 35370886 . G . PASS END=35370886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,645:0,22,255:19,0 chr1 35370887 . T . PASS END=35370887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 35370888 . A . LowGQ END=35370888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,704:0,0,255:18,0 chr1 35370889 . T . PASS END=35370892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35370893 . G . PASS END=35370893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,629:0,33,255:18,0 chr1 35370894 . C . PASS END=35370895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 35370896 . C . PASS END=35370896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,621:0,19,255:18,0 chr1 35370897 . T . PASS END=35370897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,638:0,36,255:19,0 chr1 35370898 . G . PASS END=35370898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35370899 . G . PASS END=35370899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:18,0 chr1 35370900 . C . PASS END=35370902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35370903 . C . PASS END=35370903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,676:0,36,255:19,0 chr1 35370904 . A . LowGQ END=35370904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,557:0,0,255:16,0 chr1 35370905 . G . PASS END=35370905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35370906 . G . PASS END=35370906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 35370907 . G . LowGQ END=35370907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,615:0,0,255:20,0 chr1 35370908 . C . PASS END=35370913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:23,0 chr1 35370914 . T . PASS END=35370918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 35370919 . A . PASS END=35370955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,893:0,64,255:26,0 chr1 35370956 . C . PASS END=35370956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 35370957 . T . PASS END=35370957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35370958 . G . PASS END=35370961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 35370962 . C . PASS END=35370983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,46,255:19,0 chr1 35370984 . T . PASS END=35370984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 35442944 . T . PASS END=35443003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1164:0,80,255:35,0 chr1 35447545 . C . PASS END=35447558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:18,0 chr1 35447559 . C . PASS END=35447575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:25,0 chr1 35447576 . G . PASS END=35447643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1019:0,84,255:40,0 chr1 35447644 . C . PASS END=35447644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr1 35447645 . A . PASS END=35447700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,86,255:38,0 chr1 35447701 . T . PASS END=35447701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 35447702 . G . PASS END=35447704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 35447705 . A . PASS END=35447719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,68,255:22,0 chr1 35447720 . C . PASS END=35447720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 35449368 . C . PASS END=35449369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 35449370 . A . PASS END=35449375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 35449376 . A . PASS END=35449376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 35449377 . G . PASS END=35449391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,814:0,63,255:26,0 chr1 35449392 . A . PASS END=35449393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 35449394 . T . PASS END=35449394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 35449395 . T . PASS END=35449529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1155:0,80,255:40,0 chr1 35449530 . A . PASS END=35449530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1095:0,75,255:33,0 chr1 35449531 . C . PASS END=35449544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:35,0 chr1 35449545 . C . PASS END=35449548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:32:0,69,1035:0,79,255:23,0 chr1 35450799 . C . PASS END=35450827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,582:0,40,255:19,0 chr1 35450828 . C . PASS END=35450829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 35450830 . T . PASS END=35450830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 35450831 . C . PASS END=35450831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 35450832 . C . PASS END=35450832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,0 chr1 35450833 . G . PASS END=35450833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 35450834 . A . PASS END=35450834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 35450835 . G . PASS END=35450835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 35450836 . A . PASS END=35450836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:20,0 chr1 35450837 . G . PASS END=35450837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 35450838 . C . PASS END=35450838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 35450839 . T . PASS END=35450839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 35450840 . T . PASS END=35450842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 35450843 . C . PASS END=35450846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:20,0 chr1 35450847 . C . PASS END=35450847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 35450848 . C . PASS END=35450849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 35450850 . C . PASS END=35450851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 35450852 . C . PASS END=35450855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:24,0 chr1 35450856 . C . PASS END=35450856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 35450857 . G . PASS END=35450857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 35450858 . C . PASS END=35450858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr1 35450859 . G . PASS END=35450859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 35450860 . A . PASS END=35450860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr1 35450861 . A . PASS END=35450861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:23,0 chr1 35450862 . G . PASS END=35450863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,811:0,72,255:24,0 chr1 35450864 . A . PASS END=35450864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 35450865 . G . PASS END=35450869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 35450870 . C . PASS END=35450887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:40:18:0,40,643:0,40,255:18,0 chr1 35450888 . C . PASS END=35450888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 35450889 . C . PASS END=35450890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 35450891 . A . PASS END=35450891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 35450892 . A . PASS END=35450892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 35450893 . A . PASS END=35450893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 35450894 . G . PASS END=35450895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr1 35450896 . A . PASS END=35450896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 35450897 . G . PASS END=35450898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 35450899 . A . PASS END=35450899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 35450900 . G . PASS END=35450900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 35450901 . C . PASS END=35450901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,492:0,34,255:14,0 chr1 35450902 . G . PASS END=35450902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 35450903 . C . PASS END=35450903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 35450904 . C . PASS END=35450906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 35452705 . C . PASS END=35452706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1028:0,93,255:31,0 chr1 35452707 . A . PASS END=35452707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,918:0,60,255:29,0 chr1 35452708 . C . PASS END=35454536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:33:0,81,872:0,81,255:40,1 chr1 35457835 . C . PASS END=35457836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 35457837 . G . PASS END=35457837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 35457838 . T . PASS END=35457845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr1 35457846 . T . PASS END=35457859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:34,0 chr1 35457860 . A . PASS END=35457860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:33,0 chr1 35457861 . T . PASS END=35457945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1169:0,86,255:40,0 chr1 35457946 . A . PASS END=35457946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1301:0,73,255:33,0 chr1 35457947 . T . PASS END=35457966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1211:0,88,255:34,0 chr1 35457967 . T . PASS END=35457988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:26,0 chr1 35469569 . A . PASS END=35469606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:84:0,120,1800:0,239,255:40,0 chr1 35470733 . C . PASS END=35470873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:35:0,87,1298:0,91,255:40,0 chr1 35472552 . C . PASS END=35472698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,109,1311:0,109,255:40,0 chr1 35472699 . T . PASS END=35472699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1031:0,56,255:36,0 chr1 35474353 . C . PASS END=35474525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:85:43:0,85,1356:0,85,255:40,0 chr1 35476048 . C . PASS END=35476198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:52:0,114,1710:0,135,255:40,0 chr1 35476359 . C . PASS END=35476494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1211:0,87,255:40,0 chr1 35476495 . C . PASS END=35476495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:31,0 chr1 35476496 . G . PASS END=35476537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:36,0 chr1 35476538 . T . PASS END=35476561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:25,0 chr1 35476562 . G . PASS END=35476566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:26,0 chr1 35476567 . C . PASS END=35476567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 35476568 . T . PASS END=35476568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:25,0 chr1 35476569 . T . PASS END=35476569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 35476570 . A . PASS END=35476570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr1 35476571 . C . PASS END=35476587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr1 35476588 . G . PASS END=35476607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,53,255:19,0 chr1 35476608 . G . PASS END=35476609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:31:16:0,31,452:0,31,255:15,0 chr1 35476610 . T . PASS END=35476626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 35476627 . C . PASS END=35476637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 35477491 . C . PASS END=35477606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,120,1800:0,138,255:40,0 chr1 35478032 . C . PASS END=35478037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 35478038 . A . PASS END=35478038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 35478039 . A . PASS END=35478045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,884:0,64,255:26,0 chr1 35478046 . G . PASS END=35478182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:98:36:0,98,1372:0,98,255:40,0 chr1 35480298 . C . PASS END=35480489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:32:0,80,1219:0,80,255:40,0 chr1 35480589 . A . PASS END=35480763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:43:0,116,1628:0,116,255:40,0 chr1 35484869 . T . PASS END=35485197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:34:0,81,1215:0,86,255:40,1 chr1 35485198 . G . PASS END=35485203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1109:0,69,255:26,0 chr1 35485984 . C . PASS END=35486027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:63:0,120,1800:0,134,255:40,0 chr1 35486028 . T . PASS END=35486068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,4:71:99:58:0,120,1800:0,125,255:40,0 chr1 35496148 . T . PASS END=35496240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:46:0,95,1798:0,95,255:40,0 chr1 35554761 . A . PASS END=35554776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:57:0,120,1800:0,144,255:40,0 chr1 35559515 . G . PASS END=35559684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:47:0,120,1800:0,127,255:40,0 chr1 35561420 . G . PASS END=35561444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,148,255:40,0 chr1 35561445 . G . PASS END=35561472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,177,255:40,0 chr1 35561473 . T . PASS END=35561492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:64:0,120,1800:0,142,255:40,0 chr1 35562918 . C . PASS END=35562924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,992:0,78,255:26,0 chr1 35562925 . G . PASS END=35562927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 35562928 . G . PASS END=35562928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 35562929 . A . PASS END=35562943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr1 35562944 . C . PASS END=35562952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,861:0,83,255:28,0 chr1 35562953 . G . PASS END=35562953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 35562954 . C . PASS END=35562964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1172:0,87,255:31,0 chr1 35562965 . G A, 140.30 PASS DP=31;MQ=249.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,20,0:0,11,0:90:178,93,0,1202,93,1202:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,15:0,0,15,16 chr1 35562966 . T . PASS END=35563002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1194:0,93,255:40,0 chr1 35563003 . T . PASS END=35563165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:33:0,83,1162:0,83,255:40,0 chr1 35563166 . A . PASS END=35563167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr1 35569896 . A . PASS END=35569896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1336:0,79,255:39,0 chr1 35569897 . G . PASS END=35570070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,100,1229:0,100,255:40,0 chr1 35570158 . A . PASS END=35570360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:87:37:0,87,1305:0,111,255:40,0 chr1 35570361 . A . PASS END=35570363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 35570364 . T . PASS END=35570367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,95,255:27,0 chr1 35570368 . C . PASS END=35570370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 35575895 . A . PASS END=35576038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:29:0,81,1215:0,87,255:40,0 chr1 35576039 . T . PASS END=35576041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,964:0,70,255:26,0 chr1 35576042 . T . PASS END=35576045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 35576046 . C . PASS END=35576048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 35577373 . T . PASS END=35577513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:39:0,95,1498:0,95,255:40,0 chr1 35577688 . A . PASS END=35577731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:91:0,120,1800:0,228,255:40,0 chr1 35578578 . C . PASS END=35578590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,889:0,69,255:26,0 chr1 35578591 . C . PASS END=35578594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35578595 . T . PASS END=35578599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 35578600 . A . PASS END=35580814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:29:0,81,1215:0,86,255:40,0 chr1 35580815 . C . PASS END=35580822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1055:0,74,255:27,0 chr1 35580823 . T . PASS END=35580826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 35580827 . G . PASS END=35580827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 35580828 . G . PASS END=35580830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 35580831 . A . PASS END=35580831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 35580832 . A . PASS END=35580842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 35580843 . C . PASS END=35580843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 35580844 . A . PASS END=35580851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 35580852 . G . PASS END=35580860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,67,255:26,0 chr1 35643614 . T . PASS END=35643637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,2:92:99:91:0,120,1800:0,224,255:40,0 chr1 35650057 . C . PASS END=35650059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35650060 . A . PASS END=35650060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:19,0 chr1 35650061 . A . PASS END=35650081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,732:0,63,255:23,0 chr1 35650082 . C . PASS END=35650082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 35650083 . C . PASS END=35650083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 35650084 . T . PASS END=35650084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35650085 . T . PASS END=35650085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 35650086 . C . PASS END=35650087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35650088 . T . PASS END=35650088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:26,0 chr1 35650089 . A . PASS END=35650090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:27,0 chr1 35650091 . T . PASS END=35650150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,987:0,80,255:34,0 chr1 35650151 . C . PASS END=35650153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 35650154 . C . PASS END=35650156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 35650157 . A . PASS END=35650157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 35650158 . C . PASS END=35650158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 35650159 . A . PASS END=35650170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr1 35650171 . T . PASS END=35650171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 35650172 . C . PASS END=35650172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 35650173 . C . PASS END=35650194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:17:0,41,630:0,41,255:19,0 chr1 35652548 . C . PASS END=35652723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:53:0,120,1800:0,148,255:40,0 chr1 35652804 . C . PASS END=35652852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,156,255:40,0 chr1 35653574 . T . PASS END=35653595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,135,255:40,0 chr1 35653596 . C . PASS END=35653596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:71:56:0,71,1685:0,71,255:40,0 chr1 35653597 . T . PASS END=35653599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,152,255:40,0 chr1 35653600 . A . LowGQ END=35653600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,13:56:0:56:0,0,1222:104,0,255:40,0 chr1 35653601 . A . PASS END=35653601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,8:56:35:56:0,35,1446:0,35,255:40,0 chr1 35653602 . C . LowGQ END=35653602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,13:56:0:56:0,0,1266:114,0,255:40,0 chr1 35653603 . T . PASS END=35653643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,118,1789:0,118,255:40,0 chr1 35653644 . T . PASS END=35653687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:37:0,97,1291:0,97,255:40,0 chr1 35653688 . T . PASS END=35653688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:32,0 chr1 35653689 . T . PASS END=35653691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 35654604 . C . PASS END=35654688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,153,255:40,0 chr1 35654787 . C . PASS END=35654968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:34:0,81,1215:0,86,255:40,0 chr1 35654969 . G . PASS END=35654979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,83,255:26,0 chr1 35654980 . C . PASS END=35654983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:17,0 chr1 35656099 . T . PASS END=35656162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:34:0,86,1155:0,86,255:40,1 chr1 35656163 . C . PASS END=35656163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:77:48:0,77,1669:0,77,255:40,1 chr1 35656164 . A . PASS END=35656194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:43:0,105,1620:0,105,255:40,0 chr1 35656295 . G . PASS END=35656545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:32:0,81,1215:0,82,255:40,1 chr1 35656546 . G . PASS END=35656555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:29:0,63,945:0,70,255:24,0 chr1 35656556 . T . PASS END=35656596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 35656942 . A . PASS END=35657092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:36:0,84,1260:0,101,255:40,0 chr1 35657093 . C . PASS END=35657093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 35657094 . C . PASS END=35657098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,91,255:27,0 chr1 35657099 . C . PASS END=35657118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,945:0,62,255:25,0 chr1 35657119 . G . PASS END=35657130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:18,0 chr1 35657823 . C . PASS END=35657829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 35657830 . T . PASS END=35657830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 35657831 . C . PASS END=35657842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 35657843 . C . PASS END=35657878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 35657879 . C . PASS END=35657880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 35657881 . T . PASS END=35657885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 35657886 . A . PASS END=35657899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:14:0,31,512:0,31,255:13,0 chr1 35657900 . A . PASS END=35657900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 35657901 . G . PASS END=35657907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 35657908 . T . PASS END=35657927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:22:9:0,22,304:0,22,255:9,0 chr1 35657928 . G . PASS END=35657928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 35657929 . G . PASS END=35657931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 35657932 . T . PASS END=35657932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 35657933 . C . PASS END=35657948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 35657949 . C . PASS END=35657958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 35657959 . G . PASS END=35657975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:9,0 chr1 35657976 . A . PASS END=35657976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 35657977 . C . PASS END=35657980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 35657981 . G . PASS END=35657982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 35657983 . C . PASS END=35657983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 35657984 . C . PASS END=35658005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:13,0 chr1 35658006 . C . PASS END=35658006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 35658007 . C . PASS END=35658007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 35658008 . C . PASS END=35658019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 35658020 . T . PASS END=35658024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 35658025 . C . PASS END=35658029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 35658030 . G . PASS END=35658031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 35658032 . G . PASS END=35658073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,629:0,48,255:18,0 chr1 35658074 . C . PASS END=35658074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 35658075 . C . PASS END=35658118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:19,0 chr1 35658119 . G . PASS END=35658122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,862:0,64,255:25,0 chr1 35658123 . G . PASS END=35658130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 35658131 . C . PASS END=35658236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:26,0 chr1 35658237 . G . PASS END=35658238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35658239 . T . PASS END=35658271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr1 35658272 . C . PASS END=35658277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 35658278 . G . PASS END=35658298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 35658299 . C . PASS END=35658300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 35658301 . G . PASS END=35658303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35658304 . C . PASS END=35658319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 35658320 . C . PASS END=35658322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 35658323 . C . PASS END=35658325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 35658326 . G . PASS END=35658327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 35658328 . T . PASS END=35658328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 35658329 . T . PASS END=35658332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 35658333 . A . PASS END=35658335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 35658336 . G . PASS END=35658336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 35658337 . T . PASS END=35658337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 35658338 . C . PASS END=35658339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 35658340 . T . PASS END=35658341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 35658342 . C . PASS END=35658342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr1 35658343 . G . PASS END=35658350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:18,0 chr1 35658351 . C . PASS END=35658351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:17,0 chr1 35658352 . G . PASS END=35658371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,743:0,47,255:18,0 chr1 35658372 . C . PASS END=35658372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:14,0 chr1 35658373 . G . PASS END=35658464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,613:0,40,255:19,0 chr1 35658465 . T . PASS END=35658478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 35658479 . G . PASS END=35658490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 35658491 . T . PASS END=35658491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr1 35658492 . C . PASS END=35658492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 35658493 . T . PASS END=35658493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 35658494 . G . PASS END=35658498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 35658499 . G . LowGQ END=35658499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:10,0 chr1 35658500 . G . PASS END=35658500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 35658501 . G . PASS END=35658501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 35658502 . C . PASS END=35658503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 35658504 . A . PASS END=35658504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 35658505 . G . LowGQ END=35658505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,349:5,0,255:10,0 chr1 35658506 . G . PASS END=35658506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr1 35658507 . A . PASS END=35658507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 35658508 . C . PASS END=35658510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 35658511 . A . PASS END=35658511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,415:0,14,255:13,0 chr1 35658512 . T . LowGQ END=35658512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,5:15:0:15:0,0,253:60,0,255:9,0 chr1 35658513 . G . PASS END=35658513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,374:0,12,255:12,0 chr1 35658514 . G . PASS END=35658514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 35658515 . G . PASS END=35658515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:11,0 chr1 35658516 . G . PASS END=35658516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:11,0 chr1 35658517 . C . PASS END=35658517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 35658518 . C . PASS END=35658518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 35658519 . G . PASS END=35658520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 35658521 . G . LowGQ END=35658522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:14:0,0,274:41,0,255:11,0 chr1 35658523 . T . PASS END=35658523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 35658524 . T . PASS END=35658524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:11,0 chr1 35658525 . C . LowGQ END=35658526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,380:0,0,255:13,0 chr1 35658527 . G . PASS END=35658528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 35658529 . T . PASS END=35658529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,413:0,15,255:14,0 chr1 35658530 . T . PASS END=35658530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 35658531 . G . LowGQ END=35658531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,457:7,0,255:14,0 chr1 35658532 . A . PASS END=35658532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 35658533 . G . PASS END=35658533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 35658534 . G . LowGQ END=35658534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:4,0,255:13,0 chr1 35658535 . C . PASS END=35658535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 35658536 . C . PASS END=35658536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 35658537 . C . PASS END=35658538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,570:0,40,255:16,0 chr1 35658539 . T . LowGQ END=35658539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,471:38,0,255:14,0 chr1 35658540 . G . PASS END=35658544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,613:0,40,255:17,0 chr1 35658545 . G . PASS END=35658545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:16,0 chr1 35658546 . C . PASS END=35658549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:18,0 chr1 35658550 . G . PASS END=35658551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 35658552 . A . PASS END=35658552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:16,0 chr1 35658553 . G . PASS END=35658555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 35658556 . C . PASS END=35658556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr1 35658557 . G . PASS END=35658557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 35658558 . G . PASS END=35658558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:17,0 chr1 35658559 . A . PASS END=35658560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,568:0,5,255:15,0 chr1 35658561 . G . PASS END=35658561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 35658562 . T . LowGQ END=35658563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:20:0,0,606:9,0,255:16,0 chr1 35658564 . G . PASS END=35658564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 35658565 . T . LowGQ END=35658565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,571:12,0,255:14,0 chr1 35658566 . G . PASS END=35658567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:17,0 chr1 35658568 . A . PASS END=35658568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,543:0,2,255:15,0 chr1 35658569 . G . PASS END=35658569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 35658570 . G . PASS END=35658570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 35658571 . C . PASS END=35658571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:16,0 chr1 35658572 . C . PASS END=35658572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 35658573 . G . PASS END=35658573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,499:0,20,255:16,0 chr1 35658574 . C . PASS END=35658574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 35658575 . C . PASS END=35658575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 35658576 . G . PASS END=35658577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 35658578 . G . PASS END=35658579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr1 35658580 . C . PASS END=35658584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 35658585 . G . LowGQ END=35658585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,438:2,0,255:16,0 chr1 35658586 . C . PASS END=35658586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 35658587 . C . PASS END=35658587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 35658588 . T . PASS END=35658588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,490:0,7,255:15,0 chr1 35658589 . C . PASS END=35658589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 35658590 . C . PASS END=35658590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35658591 . T . LowGQ END=35658591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,582:28,0,255:19,0 chr1 35658592 . C . PASS END=35658592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 35658593 . C . PASS END=35658593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 35658594 . A . PASS END=35658594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 35658595 . C . PASS END=35658595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 35658596 . G . PASS END=35658596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,672:0,35,255:21,0 chr1 35658597 . C . PASS END=35658597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 35658598 . C . PASS END=35658598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 35658599 . T . PASS END=35658599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,640:0,27,255:21,0 chr1 35658600 . G . PASS END=35658600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 35658601 . T . PASS END=35658603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,645:0,11,255:20,0 chr1 35658604 . A . PASS END=35658604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr1 35658605 . A . PASS END=35658605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 35658606 . G . PASS END=35658606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 35658607 . C . PASS END=35658608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 35658609 . A . PASS END=35658609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr1 35658610 . C . PASS END=35658611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 35658612 . A . PASS END=35658612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 35658613 . C . PASS END=35658614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 35658615 . G . PASS END=35658615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,695:0,55,255:23,0 chr1 35658616 . C . PASS END=35658617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 35658618 . A . PASS END=35658618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 35658619 . C . PASS END=35658620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 35658621 . G . PASS END=35658621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:23,0 chr1 35658622 . C . PASS END=35658622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 35658623 . C . PASS END=35658623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 35658624 . A . PASS END=35658624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,759:0,25,255:22,0 chr1 35658625 . C . PASS END=35658626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 35658627 . A . PASS END=35658627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 35658628 . C . PASS END=35658642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,931:0,72,255:25,0 chr1 35658643 . C . PASS END=35658644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 35658645 . A . PASS END=35658645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 35658646 . G . PASS END=35658646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 35658647 . A . LowGQ END=35658647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,662:9,0,255:20,0 chr1 35658648 . C . PASS END=35658648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35658649 . A . PASS END=35658649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr1 35658650 . T . PASS END=35658650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35734648 . A . PASS END=35734648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 35734649 . T . PASS END=35734649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 35734650 . G . PASS END=35734656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 35734657 . A . PASS END=35734657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,734:0,58,255:23,0 chr1 35734658 . G . PASS END=35734659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 35734660 . G . PASS END=35734660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35734661 . A . PASS END=35734661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 35734662 . G . PASS END=35734663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 35734664 . T . PASS END=35734664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 35734665 . G . PASS END=35734666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 35734667 . A . PASS END=35734667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 35734668 . G . PASS END=35734668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 35734669 . T . PASS END=35734669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr1 35734670 . C . PASS END=35734681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1044:0,80,255:33,0 chr1 35734682 . A . PASS END=35734682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr1 35734683 . G . PASS END=35734688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1191:0,89,255:35,0 chr1 35734689 . A . PASS END=35734689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:32,0 chr1 35734690 . G . PASS END=35734695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr1 35786006 . A . PASS END=35786050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,108,1544:0,108,255:40,0 chr1 35790961 . T . PASS END=35791006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:94:0,120,1800:0,248,255:40,0 chr1 35824526 . G . PASS END=35824533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 35824534 . A . PASS END=35824536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 35824537 . A . PASS END=35824537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:28,0 chr1 35824538 . T . PASS END=35825047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:30:0,87,1305:0,90,255:40,1 chr1 35826795 . C . PASS END=35826856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,189,255:40,0 chr1 35827220 . G . PASS END=35827390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:38:0,111,1665:0,114,255:40,0 chr1 35835630 . G . PASS END=35835714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,113,1559:0,113,255:40,0 chr1 35835973 . C . LowGQ END=35835974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,435:0,0,255:15,0 chr1 35835975 . C . PASS END=35835975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:17,0 chr1 35835976 . C . PASS END=35835976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 35835977 . A . LowGQ END=35835977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,604:15,0,255:17,0 chr1 35835978 . C . PASS END=35835978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:19,0 chr1 35835979 . A . PASS END=35835979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,676:0,14,255:19,0 chr1 35835980 . G . PASS END=35835980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,808:0,45,255:22,0 chr1 35835981 . T . PASS END=35835981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,748:0,25,255:23,0 chr1 35835982 . T . PASS END=35835982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:23,0 chr1 35835983 . G . PASS END=35835983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,861:0,26,255:23,0 chr1 35835984 . A . PASS END=35835984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,770:0,9,255:23,0 chr1 35835985 . C . PASS END=35835985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 35835986 . T . PASS END=35835986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,914:0,37,255:25,0 chr1 35835987 . A . PASS END=35835987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,914:0,23,255:26,0 chr1 35835988 . C . PASS END=35835988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 35835989 . T . PASS END=35835989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:9:29:0,9,894:0,9,255:26,0 chr1 35835990 . G . PASS END=35835990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:27,0 chr1 35835991 . G . PASS END=35835992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 35835993 . T . PASS END=35835994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 35835995 . T . PASS END=35835995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 35835996 . C . PASS END=35835996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:29,0 chr1 35835997 . A . PASS END=35835998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:46:31:0,46,1069:0,46,255:30,0 chr1 35835999 . C . PASS END=35836001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 35836002 . T . PASS END=35836002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:33,0 chr1 35836003 . C . PASS END=35836003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1380:0,98,255:37,0 chr1 35836004 . A . PASS END=35836004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1325:0,75,255:37,0 chr1 35836005 . C . PASS END=35836005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 35836006 . T . PASS END=35836006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:36,0 chr1 35836007 . G . PASS END=35836010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,101,1410:0,101,255:38,0 chr1 35836011 . T . PASS END=35836011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1370:0,79,255:38,0 chr1 35836012 . C . PASS END=35836014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:40:0,90,1390:0,90,255:39,0 chr1 35836015 . C . PASS END=35836015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1351:0,65,255:38,0 chr1 35836016 . T . PASS END=35836226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1178:0,81,255:40,0 chr1 35836227 . A . PASS END=35836228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,82,255:25,0 chr1 35846860 . A . PASS END=35847034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:60:0,120,1800:0,166,255:40,6 chr1 35847147 . A . PASS END=35847359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:37:0,84,1260:0,107,255:40,0 chr1 35851043 . A . PASS END=35851193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,101,1530:0,101,255:40,0 chr1 35851675 . G . PASS END=35851790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1169:0,80,255:40,0 chr1 35852604 . A . PASS END=35852614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 35852615 . C . PASS END=35852615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 35852616 . A . PASS END=35852633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:18,0 chr1 35852634 . T . PASS END=35852634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 35852635 . C . PASS END=35852646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr1 35852647 . C . PASS END=35852647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 35852648 . C . PASS END=35852648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 35852649 . T . PASS END=35852666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,817:0,69,255:26,0 chr1 35852667 . A . PASS END=35852670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 35852671 . T . PASS END=35852677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 35852678 . C . PASS END=35852678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 35852679 . C . PASS END=35852679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 35852680 . C . PASS END=35852680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:23,0 chr1 35852681 . C . PASS END=35852688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,77,255:26,0 chr1 35852689 . C . PASS END=35852690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 35852691 . A . PASS END=35852693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr1 35852694 . G . PASS END=35852694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35852695 . T . PASS END=35852698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35852699 . A . PASS END=35852700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35852701 . C . PASS END=35852707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 35852708 . A . PASS END=35852738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1093:0,87,255:30,0 chr1 35852739 . A . PASS END=35852745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 35852746 . G . PASS END=35852749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35852750 . T . PASS END=35852750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 35852751 . G . PASS END=35852764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 35852765 . C . PASS END=35852771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,838:0,64,255:26,0 chr1 35852772 . C . PASS END=35852774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35852775 . G . PASS END=35852775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 35852776 . C . PASS END=35852776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 35852777 . T . PASS END=35852777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 35852778 . G . PASS END=35852779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 35852780 . C . PASS END=35852782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 35852783 . G . PASS END=35852788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1202:0,83,255:28,0 chr1 35852789 . G . PASS END=35852790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 35852791 . A . PASS END=35852804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 35852805 . C . PASS END=35852839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,953:0,71,255:25,0 chr1 35852840 . C . PASS END=35852840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:21,0 chr1 35852841 . C . PASS END=35852854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 35852855 . A . PASS END=35852855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr1 35852856 . A . PASS END=35852856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 35852857 . A . PASS END=35852857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 35852858 . A . PASS END=35852858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 35852859 . C . PASS END=35852860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 35852861 . A . PASS END=35852861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 35852862 . G . PASS END=35852862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 35852863 . A . PASS END=35852866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 35852867 . T . PASS END=35852868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:22,0 chr1 35852869 . T . PASS END=35852870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,807:0,69,255:23,0 chr1 35852871 . G . PASS END=35852872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 35852873 . C . PASS END=35852876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 35852877 . A . PASS END=35852877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:20,0 chr1 35852878 . A . PASS END=35852879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 35853055 . G . PASS END=35853205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:57:0,120,1800:0,143,255:40,0 chr1 35854511 . G . PASS END=35854683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:39:0,84,1305:0,84,255:40,1 chr1 35855549 . A . PASS END=35855699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:34:0,88,1083:0,88,255:40,0 chr1 35857813 . C . PASS END=35857815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 35857816 . A . PASS END=35857828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,995:0,80,255:32,0 chr1 35857829 . T . PASS END=35857829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr1 35857830 . C . PASS END=35857953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:32:0,96,1166:0,96,255:40,0 chr1 35858248 . G . PASS END=35858285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:76:0,120,1800:0,218,255:40,0 chr1 35859196 . G . PASS END=35859340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,102,1452:0,114,255:40,0 chr1 35862153 . A . PASS END=35862271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:50:0,120,1800:0,120,255:40,0 chr1 35862978 . A . PASS END=35863146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:34:0,102,1189:0,102,255:40,0 chr1 35864014 . A . PASS END=35864067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:99:93:0,120,1800:0,253,255:40,0 chr1 35864465 . A . PASS END=35864466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:30,0 chr1 35864467 . C . PASS END=35864467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,984:0,43,255:27,0 chr1 35864468 . A . PASS END=35864469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1086:0,65,255:29,0 chr1 35864470 . G . PASS END=35864475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1241:0,86,255:33,0 chr1 35864476 . A . PASS END=35864476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:31,0 chr1 35864477 . C . PASS END=35864496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:36:0,86,1234:0,86,255:37,0 chr1 35864497 . T . PASS END=35864497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 35864498 . C . PASS END=35864644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:98:38:0,98,1349:0,98,255:40,0 chr1 35865083 . A . PASS END=35865177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:33:0,88,1213:0,88,255:40,0 chr1 35870624 . G . PASS END=35870633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr1 35870634 . A . PASS END=35870644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:26,0 chr1 35870645 . G . PASS END=35870792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,986:0,81,255:40,0 chr1 35870793 . G . PASS END=35870793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr1 35870794 . A . PASS END=35870794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 35870795 . G . PASS END=35870795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 35870974 . G . PASS END=35871057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:37:0,84,1260:0,111,255:40,0 chr1 35871058 . C . PASS END=35871069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:61:26:0,61,908:0,61,255:24,0 chr1 35873609 . T . PASS END=35873614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr1 35873615 . C . PASS END=35873615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 35873616 . T . PASS END=35873616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 35873617 . A . PASS END=35873617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 35873618 . T . PASS END=35873618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 35873619 . C . PASS END=35873752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:31:0,83,1172:0,83,255:40,0 chr1 35873753 . T . PASS END=35873753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 35873754 . T . PASS END=35873758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 35873759 . A . PASS END=35873760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 35879573 . T . PASS END=35879684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,128,255:40,0 chr1 35881067 . G . PASS END=35881075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1077:0,82,255:33,0 chr1 35881076 . T . PASS END=35881076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:31,0 chr1 35881077 . C . PASS END=35881086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:34,0 chr1 35881087 . G . PASS END=35881087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 35881088 . A . PASS END=35881278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:34:0,86,1136:0,86,255:40,0 chr1 35881279 . T . PASS END=35881279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 35881280 . T . PASS END=35881293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 35881294 . C . PASS END=35881302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:25,0 chr1 35881303 . G . PASS END=35881303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 35881304 . A . PASS END=35881306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:21,0 chr1 35881307 . C . PASS END=35881308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 35881309 . G . PASS END=35881313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,70,255:22,0 chr1 35881314 . A . PASS END=35881314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 35881315 . G . PASS END=35881315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 35884044 . A . PASS END=35884173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:39:0,90,1386:0,90,255:40,0 chr1 35885071 . T . PASS END=35885078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:26,0 chr1 35885079 . G . PASS END=35885079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:24,0 chr1 35885080 . T . PASS END=35885083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,931:0,78,255:26,0 chr1 35885084 . A . PASS END=35885085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr1 35885086 . G . PASS END=35885091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 35885092 . G . PASS END=35885092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 35885093 . A . PASS END=35885095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 35885096 . G . PASS END=35885096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 35885097 . A . PASS END=35885099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 35885100 . T . PASS END=35885100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 35885101 . G . PASS END=35885267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:33:0,85,1159:0,85,255:40,0 chr1 35885268 . T . PASS END=35885269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 35885270 . T . PASS END=35885278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1202:0,83,255:30,0 chr1 35900495 . C . PASS END=35900516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr1 35900517 . C . PASS END=35900637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,980:0,80,255:34,0 chr1 35900638 . A . PASS END=35900638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:28,0 chr1 35900639 . G . PASS END=35900643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 35900644 . T . PASS END=35900648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 35900649 . C . PASS END=35900649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:23,0 chr1 35900650 . T . PASS END=35900655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 35900656 . T . PASS END=35900656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 35900657 . T . PASS END=35900671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 35900672 . C . PASS END=35900673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 35900674 . G . PASS END=35900682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35906648 . C . PASS END=35906649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 35906650 . G . PASS END=35906653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 35906654 . G . PASS END=35906654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 35906655 . G . PASS END=35906662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:22,0 chr1 35906663 . G . PASS END=35906663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 35906664 . C . PASS END=35906671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 35906672 . C . PASS END=35906672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 35906673 . C . PASS END=35906686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 35906687 . C . PASS END=35906687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 35906688 . C . PASS END=35906697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 35906698 . A . PASS END=35906698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 35906699 . G . PASS END=35906703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 35906704 . T . PASS END=35906704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 35906705 . T . PASS END=35906707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 35906708 . A . PASS END=35906708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr1 35906709 . C . PASS END=35906715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 35906716 . T . PASS END=35906716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 35906717 . T . PASS END=35906718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 35906719 . C . PASS END=35906731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr1 35906732 . C . PASS END=35906732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:17,0 chr1 35906733 . T . PASS END=35906739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,53,255:17,0 chr1 35907847 . C . PASS END=35907937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:56:0,120,1800:0,168,255:40,0 chr1 35908507 . C . PASS END=35908629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:48:0,114,1710:0,144,255:40,0 chr1 35909762 . T . PASS END=35909763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 35909764 . A . PASS END=35909765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 35909766 . A . PASS END=35909766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 35909767 . G . PASS END=35909773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 35909774 . C . PASS END=35909774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35909775 . T . PASS END=35909775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 35909776 . T . PASS END=35909779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 35909780 . A . PASS END=35909780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 35909781 . G . PASS END=35909783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 35909784 . T . PASS END=35909784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 35909785 . C . PASS END=35909796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 35909797 . A . PASS END=35909797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr1 35909798 . A . PASS END=35909803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:30,0 chr1 35909804 . C . PASS END=35909804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 35909805 . C . PASS END=35909808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1004:0,90,255:30,0 chr1 35909809 . T . PASS END=35909809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 35909810 . G . PASS END=35909810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 35909811 . C . PASS END=35909811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr1 35909812 . T . PASS END=35909820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:31,0 chr1 35909821 . T . PASS END=35909821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 35909822 . C . PASS END=35909822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 35909823 . A . PASS END=35909823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 35909824 . C . PASS END=35909824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 35909825 . T . PASS END=35909825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1037:0,63,255:28,0 chr1 35909826 . C . PASS END=35909839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 35909840 . C . PASS END=35909893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,792:0,62,255:26,0 chr1 35909894 . C . PASS END=35909904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 35912801 . C . PASS END=35912829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:56:0,87,1305:0,113,255:40,0 chr1 35912830 . T . PASS END=35912830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,5:55:68:55:0,68,1682:0,68,255:25,0 chr1 35912831 . C . PASS END=35912834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:53:0,84,1260:0,99,255:28,0 chr1 35913774 . C . PASS END=35913777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 35913778 . G . PASS END=35913778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr1 35913779 . C . PASS END=35913906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1016:0,81,255:40,0 chr1 35913907 . T . PASS END=35913907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1150:0,61,255:31,0 chr1 35913908 . C . PASS END=35913912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 35913913 . C . PASS END=35913933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,71,255:25,0 chr1 35915468 . C . PASS END=35915606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:34:0,84,1218:0,84,255:40,0 chr1 35915959 . C . PASS END=35915962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 35915963 . G . PASS END=35915963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 35915964 . C . PASS END=35915971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1096:0,90,255:30,0 chr1 35915972 . C . PASS END=35915972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 35915973 . T . PASS END=35915976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 35915977 . C . PASS END=35915977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 35915978 . T . PASS END=35916100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1088:0,83,255:38,0 chr1 35916101 . T . PASS END=35916110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 35917229 . C . PASS END=35917392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:91:40:0,91,1458:0,91,255:40,0 chr1 35919158 . T . PASS END=35919159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:31,0 chr1 35919160 . T . PASS END=35919160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 35919161 . G . PASS END=35919289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1134:0,80,255:40,0 chr1 35919290 . T . PASS END=35919290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 35919963 . C . PASS END=35919965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1093:0,80,255:32,0 chr1 35919966 . G . PASS END=35919966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 35919967 . T . PASS END=35919970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 35919971 . A . PASS END=35919971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:30,0 chr1 35919972 . C . PASS END=35919985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr1 35919986 . T . PASS END=35919986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:31,0 chr1 35919987 . G . PASS END=35920039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1288:0,87,255:40,0 chr1 35920040 . T . PASS END=35920040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1218:0,48,255:35,0 chr1 35920041 . C . PASS END=35920079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1213:0,81,255:38,0 chr1 35920080 . T . PASS END=35920086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:28:0,68,1000:0,68,255:26,0 chr1 35921614 . C . PASS END=35921615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 35921616 . G . PASS END=35921616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,813:0,45,255:22,0 chr1 35921617 . C . PASS END=35921619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,840:0,72,255:24,0 chr1 35921620 . C . PASS END=35921626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr1 35921627 . A . PASS END=35921627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:27,0 chr1 35921628 . C . PASS END=35921628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr1 35921629 . T . PASS END=35921630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 35921631 . T . PASS END=35921631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 35921632 . C . PASS END=35921633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 35921634 . C . PASS END=35921635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,967:0,90,255:30,0 chr1 35921636 . T . PASS END=35921636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 35921637 . T . PASS END=35921647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 35921648 . C . PASS END=35921649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 35921650 . G . PASS END=35921650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 35921651 . A . PASS END=35921651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 35921652 . G . PASS END=35921721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1148:0,81,255:38,0 chr1 35921722 . G . PASS END=35921723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,1 chr1 35921724 . G . PASS END=35921809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1231:0,86,255:37,0 chr1 35921810 . T . PASS END=35921810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 35921811 . T . PASS END=35921819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 35921820 . C . PASS END=35921842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:22:0,60,900:0,66,255:26,0 chr1 35925906 . C . PASS END=35926038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:49:0,120,1800:0,137,255:40,0 chr1 35928222 . G . PASS END=35928314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1792:0,120,255:40,0 chr1 35932209 . C . PASS END=35932296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,99,1710:0,99,255:40,0 chr1 35936464 . C . PASS END=35936561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,111,1665:0,129,255:40,0 chr1 35940406 . C . PASS END=35940507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:41:0,102,1530:0,107,255:40,0 chr1 35944567 . C . PASS END=35944567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 35944568 . T . PASS END=35944568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:7,0 chr1 35944569 . G . PASS END=35944575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 35944576 . G . PASS END=35944588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,415:0,36,255:13,0 chr1 35944589 . C . PASS END=35944600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,482:0,42,255:17,0 chr1 35944601 . C . PASS END=35944602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 35944603 . G . PASS END=35944611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,653:0,41,255:19,0 chr1 35944612 . G . PASS END=35944613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:23,0 chr1 35944614 . G . PASS END=35944614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 35944615 . T . PASS END=35944634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,848:0,69,255:26,0 chr1 35944635 . G . PASS END=35944635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,793:0,48,255:25,0 chr1 35944636 . C . PASS END=35944720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1000:0,80,255:33,0 chr1 35944721 . T . PASS END=35944721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 35944722 . T . PASS END=35944724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 35944725 . G . PASS END=35944725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 35944726 . G . PASS END=35944740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1133:0,80,255:29,0 chr1 35944741 . T . PASS END=35944741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 35944742 . C . PASS END=35944750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1066:0,93,255:31,0 chr1 35944751 . A . PASS END=35944756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,77,255:26,0 chr1 35944757 . C . PASS END=35944757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:22,0 chr1 35944758 . A . PASS END=35944763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:23,0 chr1 35944764 . G . PASS END=35944764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:20,0 chr1 35944765 . C . PASS END=35944773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 35944774 . C . PASS END=35944813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,523:0,45,255:19,0 chr1 35972213 . C . PASS END=35972213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr1 35972214 . T . PASS END=35972214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:34,0 chr1 35972215 . C . PASS END=35972341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:36:0,80,1242:0,80,255:40,0 chr1 35972342 . C . PASS END=35972342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1218:0,61,255:28,0 chr1 35972343 . T . PASS END=35972349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,88,255:30,0 chr1 35972350 . T . PASS END=35972351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1054:0,74,255:26,0 chr1 35972352 . G . PASS END=35972352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 35972353 . A . PASS END=35972358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:26,0 chr1 35972359 . C . PASS END=35972400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 35972401 . A . PASS END=35972401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 35972402 . T . PASS END=35972589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1146:0,81,255:38,0 chr1 35972590 . C . PASS END=35972590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 35972591 . A . PASS END=35972736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:32:0,85,1172:0,85,255:40,0 chr1 36019951 . C . PASS END=36019955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1058:0,87,255:30,0 chr1 36019956 . G . PASS END=36019956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 36019957 . A . PASS END=36019959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 36019960 . A . PASS END=36020092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1186:0,83,255:40,0 chr1 36023792 . A . PASS END=36023824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1187:0,88,255:36,0 chr1 36024708 . T . PASS END=36024715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 36024716 . G . PASS END=36024824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1002:0,80,255:37,0 chr1 36024825 . G . PASS END=36024837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,83,255:23,0 chr1 36024838 . C . PASS END=36024848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:19,0 chr1 36025927 . G . PASS END=36025928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 36025929 . G . PASS END=36026033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1003:0,84,255:39,0 chr1 36026034 . G . PASS END=36026034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:35,0 chr1 36026035 . C . PASS END=36026035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:33,0 chr1 36026036 . C . PASS END=36026036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 36026037 . G . PASS END=36026059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,89,255:35,0 chr1 36026060 . T . PASS END=36026071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:32:0,66,990:0,89,255:26,0 chr1 36026072 . G . PASS END=36026072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 36026073 . T . PASS END=36026078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 36026079 . C . PASS END=36026088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:27,0 chr1 36026089 . T . PASS END=36026090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 36026091 . C . PASS END=36026099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 36026100 . T . PASS END=36026131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,71,255:25,0 chr1 36026132 . T . PASS END=36026132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:20,0 chr1 36026133 . G . PASS END=36026134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,800:0,33,255:22,0 chr1 36026135 . A . PASS END=36026157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:22,0 chr1 36026158 . T . PASS END=36026174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 36026175 . G . PASS END=36026175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 36026176 . G . PASS END=36026190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 36026191 . G . PASS END=36026191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 36026192 . C . PASS END=36026231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:24,0 chr1 36026232 . G . PASS END=36026232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 36026233 . G . PASS END=36026314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,853:0,61,255:26,0 chr1 36026315 . A . PASS END=36026317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:18,0 chr1 36026318 . G . PASS END=36026334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 36026335 . G . PASS END=36026376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 36026377 . C . PASS END=36026379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr1 36026380 . T . PASS END=36026388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:14,0 chr1 36026389 . G . PASS END=36026395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 36026396 . A . PASS END=36026396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 36026397 . G . PASS END=36026418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 36026419 . C . PASS END=36026450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 36026451 . G . PASS END=36026451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 36026452 . G . PASS END=36026452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36026453 . A . PASS END=36026461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36026462 . A . PASS END=36026476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 36026477 . A . PASS END=36026522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:13,0 chr1 36026523 . C . PASS END=36026530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr1 36026531 . A . PASS END=36026531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 36026532 . T . PASS END=36026587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:18,0 chr1 36026588 . A . PASS END=36026590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36026591 . C . PASS END=36026592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 36026593 . G . PASS END=36026612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr1 36026613 . C . PASS END=36026613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 36026614 . C . PASS END=36026614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 36026615 . T . PASS END=36026615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 36026616 . G . PASS END=36026647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,839:0,66,255:24,0 chr1 36026648 . C . PASS END=36026648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 36026649 . G . PASS END=36026673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,970:0,65,255:26,0 chr1 36026674 . G . PASS END=36026680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:30,0 chr1 36026681 . T . PASS END=36026681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 36026682 . G . PASS END=36026862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1157:0,81,255:40,0 chr1 36026863 . G . PASS END=36026863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1317:0,73,255:31,0 chr1 36026864 . C . PASS END=36026867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,102,1530:0,113,255:35,0 chr1 36026868 . A . PASS END=36026868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1396:0,57,255:33,0 chr1 36026869 . G . PASS END=36026890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1156:0,83,255:36,0 chr1 36026891 . T . PASS END=36026891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:28,0 chr1 36026892 . G . PASS END=36026895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 36027993 . G . PASS END=36028004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,816:0,72,255:24,0 chr1 36028005 . A . PASS END=36028005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:23,0 chr1 36028006 . A . PASS END=36028014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 36028015 . A . PASS END=36028015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 36028016 . G . PASS END=36028030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,817:0,72,255:26,0 chr1 36028031 . C . PASS END=36028033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 36028034 . G . PASS END=36028058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,893:0,75,255:26,0 chr1 36028059 . G . PASS END=36028067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 36028068 . A . PASS END=36028068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr1 36028069 . C . PASS END=36028076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 36028077 . T . PASS END=36028104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 36028105 . C . PASS END=36028105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 36028106 . C . PASS END=36028109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 36028110 . C . PASS END=36028110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 36028111 . T . PASS END=36028111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36028112 . C . PASS END=36028116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 36028117 . G . PASS END=36028117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:18,0 chr1 36028118 . C . PASS END=36028132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:17,0 chr1 36028133 . C . PASS END=36028133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:13,0 chr1 36028134 . T . PASS END=36028134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:13,0 chr1 36028135 . A . PASS END=36028141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 36028142 . G . PASS END=36028142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 36028143 . G . PASS END=36028143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 36028144 . C . PASS END=36028162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:19,0 chr1 36028163 . T . PASS END=36028167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 36028168 . A . PASS END=36028234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,545:0,41,255:19,0 chr1 36028803 . G . PASS END=36028810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:16,0 chr1 36028811 . T . PASS END=36028811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 36028812 . G . PASS END=36028827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:18,0 chr1 36028828 . C . PASS END=36028828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 36028829 . T . PASS END=36028859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,597:0,40,255:19,0 chr1 36028860 . G . PASS END=36028861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36028862 . T . PASS END=36028870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,743:0,47,255:19,0 chr1 36028871 . G . PASS END=36028873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 36028874 . C . PASS END=36028874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 36028875 . C . PASS END=36028878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 36028879 . T . PASS END=36028879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 36028880 . C . PASS END=36028888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr1 36028889 . G . PASS END=36028889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 36028890 . C . PASS END=36028890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 36028891 . A . PASS END=36028891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 36028892 . A . PASS END=36028903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 36028904 . A . PASS END=36028904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 36028905 . G . PASS END=36028906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 36028907 . A . PASS END=36028907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr1 36028908 . G . PASS END=36028912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 36028913 . A . PASS END=36028928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,729:0,47,255:19,0 chr1 36028929 . C . PASS END=36028936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr1 36028937 . C . PASS END=36028937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 36028938 . C . PASS END=36028944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,762:0,66,255:22,0 chr1 36028945 . C . PASS END=36028946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36028947 . G . PASS END=36028947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 36028948 . C . PASS END=36028948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 36028949 . C . PASS END=36028949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 36028950 . T . PASS END=36028950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 36028951 . G . PASS END=36028952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 36028953 . C . PASS END=36028953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 36028954 . A . PASS END=36028960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 36028961 . A . PASS END=36028961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 36028962 . G . PASS END=36028962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 36028963 . A . PASS END=36028963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 36028964 . T . PASS END=36028985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:22,0 chr1 36028986 . C . PASS END=36028986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 36028987 . A . PASS END=36028990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36028991 . T . PASS END=36028991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr1 36028992 . C . PASS END=36029004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 36029005 . G . PASS END=36029019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,47,255:19,0 chr1 36029020 . C . PASS END=36029027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,32,255:12,0 chr1 36029368 . G . PASS END=36029387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,842:0,64,255:25,0 chr1 36029388 . C . PASS END=36029388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36029389 . T . PASS END=36029389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:25,0 chr1 36029390 . C . PASS END=36029390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 36029391 . T . PASS END=36029391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:25,0 chr1 36029392 . A . PASS END=36029392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 36029393 . A . PASS END=36029393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36029394 . T . PASS END=36029395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:26,0 chr1 36029396 . A . PASS END=36029397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36029398 . C . PASS END=36029398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 36029399 . A . PASS END=36029399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36029400 . C . PASS END=36029400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:28,0 chr1 36029401 . C . PASS END=36029402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36029403 . T . PASS END=36029403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,990:0,57,255:28,0 chr1 36029404 . C . PASS END=36029405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 36029406 . T . PASS END=36029406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 36029407 . G . PASS END=36029410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 36029411 . T . PASS END=36029411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:31,0 chr1 36029412 . C . PASS END=36029412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 36029413 . G . PASS END=36029413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:30,0 chr1 36029414 . C . PASS END=36029419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr1 36029420 . G . PASS END=36029420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 36029421 . C . PASS END=36029436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1194:0,86,255:32,0 chr1 36029437 . G . PASS END=36029437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1041:0,63,255:29,0 chr1 36029438 . G . PASS END=36029441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:31,0 chr1 36029442 . G . PASS END=36029442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 36029443 . G . PASS END=36029465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1082:0,80,255:33,0 chr1 36029466 . C . PASS END=36029480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:25,0 chr1 36029481 . T . PASS END=36029481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:19,0 chr1 36029482 . C . PASS END=36029506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,743:0,60,255:23,0 chr1 36029507 . C . PASS END=36029510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 36030828 . C . PASS END=36030886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1202:0,83,255:34,0 chr1 36030887 . C . PASS END=36030905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,75,255:25,0 chr1 36030906 . C . PASS END=36030906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 36030907 . C . PASS END=36030925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:23,0 chr1 36030926 . G . PASS END=36030928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:16,0 chr1 36030929 . G . PASS END=36030938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:21,0 chr1 36030939 . T . PASS END=36030940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:19,0 chr1 36030941 . T . PASS END=36030945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 36030946 . T . PASS END=36030949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,845:0,56,255:19,0 chr1 36030950 . T . PASS END=36030956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 36030957 . G . PASS END=36030960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 36030961 . C . PASS END=36031022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 36031023 . T . PASS END=36031026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 36031027 . G . PASS END=36031067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 36031068 . A . PASS END=36031085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 36031086 . T . PASS END=36031115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,443:0,39,255:13,0 chr1 36031116 . C . PASS END=36031123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 36031124 . G . PASS END=36031131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 36031132 . C . PASS END=36031132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 36031133 . T . PASS END=36031135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 36031136 . C . PASS END=36031140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36031141 . T . PASS END=36031141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36031142 . G . PASS END=36031143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36031144 . C . PASS END=36031166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 36031167 . A . PASS END=36031167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 36031168 . C . PASS END=36031184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 36031185 . C . PASS END=36031187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36031188 . T . PASS END=36031219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,443:0,39,255:13,0 chr1 36031220 . C . PASS END=36031222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36031223 . T . PASS END=36031254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 36031255 . A . PASS END=36031264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 36032424 . G . PASS END=36032432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,947:0,64,255:26,0 chr1 36032433 . G . PASS END=36032438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1095:0,90,255:31,0 chr1 36032439 . A . PASS END=36032439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 36032440 . G . PASS END=36032460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1133:0,90,255:30,0 chr1 36032461 . G . PASS END=36032461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 36032462 . C . PASS END=36032467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 36032468 . T . PASS END=36032470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:24,0 chr1 36039179 . A . PASS END=36039186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 36039187 . G . PASS END=36039187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 36039188 . C . PASS END=36039188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 36039189 . A . PASS END=36039189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 36039190 . C . PASS END=36039193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 36039194 . T . PASS END=36039194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 36039195 . A . PASS END=36039196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr1 36039197 . T . PASS END=36039197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 36039198 . C . PASS END=36039202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 36039203 . A . PASS END=36039203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 36039204 . T . PASS END=36039205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 36039528 . G . PASS END=36039532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 36039533 . C . PASS END=36039539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 36039540 . G . PASS END=36039540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 36039541 . G . PASS END=36039542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,388:0,33,255:12,0 chr1 36039543 . C . PASS END=36039543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 36039544 . T . PASS END=36039545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 36039546 . G . PASS END=36039546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 36039547 . G . PASS END=36039563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,398:0,36,255:13,0 chr1 36039564 . G . PASS END=36039674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,543:0,45,255:19,0 chr1 36039675 . T . PASS END=36039675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:14,0 chr1 36039676 . A . PASS END=36039682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 36039683 . G . PASS END=36039703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:13,0 chr1 36039704 . G . PASS END=36039704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 36039705 . G . PASS END=36039741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 36039742 . G . PASS END=36039743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 36039744 . G . PASS END=36039744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 36039745 . A . PASS END=36039748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:8,0 chr1 36039749 . A . PASS END=36039766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,210:6,0 chr1 36039767 . C . LowGQ END=36039867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,31:3,0 chr1 36039868 . C . PASS END=36039890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 36039891 . G . PASS END=36039932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 36039933 . G . PASS END=36039933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 36039934 . A . PASS END=36040002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,243:0,24,243:9,0 chr1 36040003 . A . PASS END=36040003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 36040004 . C . PASS END=36040010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 36040550 . G . PASS END=36040578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,884:0,72,255:25,0 chr1 36040579 . A . PASS END=36040579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 36040580 . G . PASS END=36040580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 36040581 . A . PASS END=36040601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,659:0,51,255:19,0 chr1 36053931 . T . PASS END=36053934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 36053935 . C . PASS END=36053951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 36053952 . G . PASS END=36053952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:25,0 chr1 36053953 . C . PASS END=36053962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 36053963 . G . PASS END=36053972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36053973 . T . PASS END=36053974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1023:0,71,255:28,0 chr1 36053975 . G . PASS END=36053983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,993:0,87,255:30,0 chr1 36053984 . A . PASS END=36053984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 36053985 . G . PASS END=36053985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36053986 . C . PASS END=36053986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 36053987 . C . PASS END=36053999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1149:0,90,255:31,0 chr1 36054000 . T . PASS END=36054000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 36054001 . C . PASS END=36054001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 36054002 . A . PASS END=36054002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:28,0 chr1 36054003 . C . PASS END=36054005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 36054006 . A . PASS END=36054006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr1 36054007 . T . PASS END=36054016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 36054017 . G . PASS END=36054018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 36054019 . C . PASS END=36054020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 36054021 . T . PASS END=36054021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 36054022 . C . PASS END=36054031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 36054032 . C . PASS END=36054037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 36054038 . C . PASS END=36054041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 36054042 . T . PASS END=36054042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 36054043 . T . PASS END=36054098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1111:0,87,255:33,0 chr1 36054099 . G . PASS END=36054099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36054100 . A . PASS END=36054101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36054102 . T . PASS END=36054115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,77,255:28,0 chr1 36054116 . T . PASS END=36054135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:19,0 chr1 36054136 . G . PASS END=36054139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 36054140 . G . PASS END=36054140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 36054141 . G . PASS END=36054153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,488:0,39,255:13,0 chr1 36055531 . G . PASS END=36055537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 36055538 . T . PASS END=36055538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,840:0,51,255:25,0 chr1 36055539 . C . PASS END=36055544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,980:0,84,255:28,0 chr1 36055545 . A . PASS END=36055549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:27,0 chr1 36055550 . G . PASS END=36055557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:30,0 chr1 36055558 . T . PASS END=36055558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,995:0,66,255:28,0 chr1 36055559 . T . PASS END=36055563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 36055564 . G . PASS END=36055564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:30,0 chr1 36055565 . G . PASS END=36055577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:32:0,93,1131:0,94,255:37,0 chr1 36055578 . A . PASS END=36055578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1335:0,70,255:35,0 chr1 36055579 . G . PASS END=36055609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:35:0,80,1221:0,80,255:37,0 chr1 36055610 . A . PASS END=36055610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr1 36055611 . A . PASS END=36055611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:32,0 chr1 36055612 . G . PASS END=36055612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:31,0 chr1 36055613 . G . PASS END=36055614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 36055615 . C . PASS END=36055615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:30,0 chr1 36055616 . G . PASS END=36055626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,83,255:32,0 chr1 36055627 . G . PASS END=36055627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:25,0 chr1 36055628 . C . PASS END=36055630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36055631 . C . PASS END=36055631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 36055632 . T . PASS END=36055637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:27,0 chr1 36055638 . C . PASS END=36055649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:25,0 chr1 36056235 . G . PASS END=36056239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36056240 . G . PASS END=36056315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,468:0,42,255:19,0 chr1 36056316 . G . PASS END=36056320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 36056321 . C . PASS END=36056354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,560:0,48,255:16,0 chr1 36056355 . A . PASS END=36056355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 36056356 . G . PASS END=36056360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 36056361 . T . PASS END=36056361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 36056362 . G . PASS END=36056375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 36056376 . A . PASS END=36056376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36059995 . G . PASS END=36059995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 36059996 . C . PASS END=36060010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr1 36060011 . T . PASS END=36060011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr1 36060012 . T . PASS END=36060025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,668:0,54,255:18,0 chr1 36060026 . G . PASS END=36060032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 36060033 . A . PASS END=36060033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 36060034 . C . PASS END=36060070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,817:0,61,255:26,0 chr1 36060071 . C . PASS END=36060071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 36060072 . T . PASS END=36060074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36060075 . A . PASS END=36060075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 36060076 . G . PASS END=36060080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,825:0,67,255:27,0 chr1 36060081 . G . PASS END=36060085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 36060086 . C . PASS END=36060086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 36060087 . A . PASS END=36060098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 36060099 . C . PASS END=36060100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 36060101 . C . PASS END=36060105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36060106 . T . PASS END=36060106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 36060107 . A . PASS END=36060147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1078:0,80,255:31,0 chr1 36060148 . T . PASS END=36060148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:28,0 chr1 36060149 . G . PASS END=36060152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 36060153 . T . PASS END=36060154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 36060155 . A . PASS END=36060155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36060156 . C . PASS END=36060156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 36060157 . T . PASS END=36060159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 36060160 . C . PASS END=36060160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 36060161 . T . PASS END=36060163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36060164 . C . PASS END=36060166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:25,0 chr1 36060167 . A . PASS END=36060167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:26,0 chr1 36060168 . A . PASS END=36060181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 36060182 . T . PASS END=36060182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36060183 . C . PASS END=36060185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 36060186 . T . PASS END=36060186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:26,0 chr1 36060187 . C . PASS END=36060187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36060188 . A . PASS END=36060188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr1 36060189 . A . PASS END=36060203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:27,0 chr1 36060204 . T . PASS END=36060204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:25,0 chr1 36060205 . G . PASS END=36060211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36060212 . A . PASS END=36060225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,68,255:23,0 chr1 36060226 . T . PASS END=36060226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:20,0 chr1 36060227 . G . PASS END=36060227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 36060228 . G . PASS END=36060228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 36060229 . G . PASS END=36060230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36060231 . A . PASS END=36060264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:15:0,40,621:0,40,255:19,0 chr1 36060265 . G . PASS END=36060265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 36060266 . C . PASS END=36060271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 36060272 . A . PASS END=36060272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 36060273 . A . PASS END=36060277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 36068868 . T . PASS END=36068975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,120,1800:0,122,255:40,0 chr1 36070834 . C . PASS END=36070883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:38:0,83,1365:0,83,255:40,0 chr1 36074847 . T . PASS END=36074852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,861:0,65,255:26,0 chr1 36074853 . T . PASS END=36074864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,988:0,81,255:30,0 chr1 36074865 . C . PASS END=36074865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 36074866 . G . PASS END=36074866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 36074867 . A . PASS END=36074867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 36074868 . G . PASS END=36074877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1150:0,93,255:32,0 chr1 36074878 . A . PASS END=36074878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 36074879 . G . PASS END=36074939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1158:0,80,255:34,0 chr1 36074940 . C . PASS END=36074941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 36074942 . A . PASS END=36074968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,88,255:30,0 chr1 36074969 . T . PASS END=36074969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 36074970 . C . PASS END=36074971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36074972 . T . PASS END=36074976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36074977 . G . PASS END=36074977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36074978 . C . PASS END=36074994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:25:0,60,900:0,68,255:26,0 chr1 36074995 . C . PASS END=36074999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,55,255:19,0 chr1 36075000 . G . PASS END=36075000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:16,0 chr1 36075001 . A . PASS END=36075007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:16,0 chr1 36075008 . G . PASS END=36075009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:17:0,39,585:0,51,255:13,0 chr1 36096875 . C . PASS END=36096945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,148,255:40,0 chr1 36101911 . C . PASS END=36102033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:65:0,120,1800:0,169,255:40,0 chr1 36106943 . C . PASS END=36107020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:35:0,84,1260:0,84,255:40,0 chr1 36107021 . T . PASS END=36107026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:30:0,60,900:0,90,255:26,0 chr1 36107027 . A . PASS END=36107033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:26:0,54,810:0,68,255:19,0 chr1 36181233 . T . PASS END=36181233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 36181234 . T . PASS END=36181234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 36181235 . A . PASS END=36181238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr1 36181239 . C . PASS END=36181239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 36181240 . T . PASS END=36181253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:19,0 chr1 36181254 . G . PASS END=36181264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:23,0 chr1 36181265 . C . PASS END=36181265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 36181266 . C . PASS END=36181270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:25,0 chr1 36181271 . G . PASS END=36181271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 36181272 . C . PASS END=36181283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,871:0,78,255:26,0 chr1 36181284 . A . PASS END=36181298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,904:0,84,255:28,0 chr1 36181299 . G . PASS END=36181301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 36181302 . G . PASS END=36181303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36181304 . C . PASS END=36181304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 36181305 . T . PASS END=36181306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36181307 . G . PASS END=36181307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 36181308 . G . PASS END=36181309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36181310 . T . PASS END=36181310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 36181311 . G . PASS END=36181318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:28,0 chr1 36181319 . A . PASS END=36181353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,68,255:26,0 chr1 36181354 . T . PASS END=36181401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,637:0,40,255:19,0 chr1 36181402 . A . PASS END=36181402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36181403 . T . PASS END=36181403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:18,0 chr1 36181404 . C . PASS END=36181424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:21,0 chr1 36181425 . T . PASS END=36181425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 36181426 . T . PASS END=36181434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 36181435 . T . PASS END=36181482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,635:0,40,255:19,0 chr1 36181483 . A . PASS END=36181483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 36181484 . C . PASS END=36181485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 36181486 . G . PASS END=36181486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:18,0 chr1 36181487 . A . PASS END=36181507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,706:0,47,255:19,0 chr1 36181508 . G . PASS END=36181508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 36181509 . G . PASS END=36181509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr1 36181510 . C . PASS END=36181521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr1 36181522 . G . PASS END=36181526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 36181527 . C . PASS END=36181529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36181530 . A . PASS END=36181530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 36181531 . C . PASS END=36181535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:20,0 chr1 36181536 . A . PASS END=36181587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,629:0,44,255:19,0 chr1 36181588 . C . PASS END=36181606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 36181607 . A . PASS END=36181608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36181609 . C . PASS END=36181611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 36181612 . A . PASS END=36181612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 36181613 . C . PASS END=36181616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36181617 . G . PASS END=36181618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36181619 . C . PASS END=36181629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36181630 . A . PASS END=36181640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 36181641 . C . PASS END=36181642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 36181643 . C . PASS END=36181681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,50,255:19,0 chr1 36181682 . C . PASS END=36181685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36181686 . T . PASS END=36181686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 36181687 . T . PASS END=36181710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,809:0,63,255:26,0 chr1 36181711 . A . PASS END=36181716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 36181717 . T . PASS END=36181717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 36181718 . G . PASS END=36181728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1032:0,87,255:30,0 chr1 36181729 . G . PASS END=36181729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 36181730 . G . PASS END=36181730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36181731 . T . PASS END=36181732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr1 36181733 . A . PASS END=36181804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1031:0,93,255:34,0 chr1 36181805 . T . PASS END=36181805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1143:0,71,255:31,0 chr1 36181806 . G . PASS END=36181851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:33,0 chr1 36181852 . T . PASS END=36181895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,861:0,68,255:25,0 chr1 36181896 . A . PASS END=36181922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 36186492 . T . PASS END=36186507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1188:0,83,255:32,0 chr1 36186508 . A . PASS END=36186508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:29,0 chr1 36186509 . A . PASS END=36186544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1187:0,92,255:36,0 chr1 36186545 . T . PASS END=36186545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:28,0 chr1 36186546 . C . PASS END=36186547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:29,0 chr1 36186548 . A . PASS END=36186548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:28,0 chr1 36186549 . G . PASS END=36186561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,89,255:32,0 chr1 36186562 . G . PASS END=36186562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 36186563 . A . PASS END=36186566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 36186567 . C . PASS END=36186580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,886:0,72,255:25,0 chr1 36186581 . T . PASS END=36186581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,740:0,58,255:24,0 chr1 36202097 . T . PASS END=36202207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:47:0,106,1670:0,106,255:40,0 chr1 36202515 . C . PASS END=36202518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36202519 . G . PASS END=36202519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 36202520 . A . PASS END=36202523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 36202524 . A . PASS END=36202524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 36202525 . G . PASS END=36202535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 36202536 . T . PASS END=36202536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 36202537 . G . PASS END=36202676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:30:0,87,1125:0,89,255:40,0 chr1 36202940 . C . PASS END=36203022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,111,1726:0,111,255:40,0 chr1 36203593 . C . PASS END=36203651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:69:0,120,1800:0,148,255:40,0 chr1 36203652 . T . PASS END=36203684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,3:86:81:78:0,81,1215:0,115,255:40,0 chr1 36203685 . T . PASS END=36203687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:60:75:0,60,900:0,105,255:24,0 chr1 36203688 . C . PASS END=36203698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:42:68:0,42,630:0,93,255:19,0 chr1 36204056 . C . PASS END=36204183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,105,1535:0,110,255:40,0 chr1 36204737 . C . PASS END=36204858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,117,1755:0,120,255:40,0 chr1 36204966 . A . PASS END=36205128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:40:0,93,1435:0,93,255:40,0 chr1 36205129 . T . PASS END=36205130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr1 36208742 . A . PASS END=36208842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,136,255:40,0 chr1 36209056 . C . PASS END=36209131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:65:0,120,1800:0,156,255:40,0 chr1 36211052 . T . PASS END=36211156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,90,255:40,0 chr1 36211157 . G . PASS END=36211163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,70,255:26,0 chr1 36212367 . C . PASS END=36212367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 36212368 . C . PASS END=36212368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 36212369 . T . PASS END=36212378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 36212379 . A . PASS END=36212379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:29,0 chr1 36212380 . T . PASS END=36212392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1111:0,80,255:30,0 chr1 36212393 . A . PASS END=36212393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1026:0,79,255:30,0 chr1 36212394 . G . PASS END=36212571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:33:0,84,1260:0,92,255:40,0 chr1 36212572 . G . PASS END=36212574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 36212575 . G . PASS END=36212578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1215:0,82,255:27,0 chr1 36212579 . C . PASS END=36212582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:26,0 chr1 36212583 . C . PASS END=36212589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 36212590 . G . PASS END=36212590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 36212591 . A . PASS END=36212593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 36213508 . C . PASS END=36213521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,746:0,63,255:25,0 chr1 36213522 . C . PASS END=36213524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 36213525 . T . PASS END=36213525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:24,0 chr1 36213526 . T . PASS END=36213541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,909:0,65,255:26,0 chr1 36213542 . C . PASS END=36213595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:29:0,87,1057:0,87,255:37,0 chr1 36213596 . G . PASS END=36213596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 36213597 . G . PASS END=36213647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,92,255:38,0 chr1 36213648 . C . PASS END=36213662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:22:0,60,900:0,62,255:26,0 chr1 36214006 . C . PASS END=36214006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 36214007 . T . PASS END=36214035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:30:0,89,1125:0,89,255:36,0 chr1 36214036 . A . PASS END=36214036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:32,0 chr1 36214037 . A . PASS END=36214158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:32:0,81,1215:0,93,255:40,0 chr1 36214159 . A . PASS END=36214164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 36214165 . G . PASS END=36214165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36214166 . C . PASS END=36214190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,914:0,62,255:26,0 chr1 36214191 . A . PASS END=36214191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 36214192 . T . PASS END=36214200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 36214201 . C . PASS END=36214205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,52,255:18,0 chr1 36215068 . C . PASS END=36215132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,161,255:40,0 chr1 36215234 . C . PASS END=36215412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:63:0,120,1800:0,151,255:40,0 chr1 36216851 . C . PASS END=36216856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1107:0,80,255:33,0 chr1 36216857 . A . PASS END=36216857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1015:0,49,255:30,0 chr1 36216858 . T . PASS END=36216860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 36216861 . C . PASS END=36216861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1044:0,60,255:31,0 chr1 36216862 . C . PASS END=36216862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,978:0,49,255:29,0 chr1 36216863 . T . PASS END=36216864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1170:0,83,255:33,0 chr1 36216865 . C . PASS END=36216865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,954:0,46,255:29,0 chr1 36216866 . T . PASS END=36216867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1114:0,82,255:33,0 chr1 36216868 . C . PASS END=36216868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,943:0,33,255:29,0 chr1 36216869 . T . PASS END=36216870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1136:0,83,255:33,0 chr1 36216871 . C . PASS END=36216871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,926:0,49,255:30,0 chr1 36216872 . C . PASS END=36216872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1009:0,38,255:31,0 chr1 36216873 . T . PASS END=36216873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 36216874 . C . PASS END=36216874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1028:0,68,255:31,0 chr1 36216875 . C . PASS END=36216875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1007:0,39,255:29,0 chr1 36216876 . T . PASS END=36216879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1091:0,88,255:34,0 chr1 36216880 . C . PASS END=36216880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1095:0,72,255:32,0 chr1 36216881 . T . PASS END=36216886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:35:0,94,1200:0,94,255:37,0 chr1 36216887 . C . PASS END=36216887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1212:0,51,255:36,0 chr1 36216888 . T . PASS END=36216976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:41:0,90,1275:0,90,255:40,0 chr1 36216977 . T . PASS END=36216977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1327:0,51,255:35,0 chr1 36216978 . T . PASS END=36216988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1286:0,90,255:38,0 chr1 36216989 . T . PASS END=36216989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1247:0,64,255:33,0 chr1 36216990 . T . PASS END=36217001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,99,1485:0,108,255:36,0 chr1 36217002 . T . PASS END=36217002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1136:0,69,255:32,0 chr1 36217003 . C . PASS END=36217003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 36217004 . T . PASS END=36217004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:32,0 chr1 36217005 . T . PASS END=36217070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1175:0,81,255:37,0 chr1 36217071 . T . PASS END=36217071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 36217072 . C . PASS END=36217073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 36217074 . T . PASS END=36217074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 36217075 . G . PASS END=36217080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 36217081 . T . PASS END=36217086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 36217087 . T . PASS END=36217087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:23,0 chr1 36217088 . T . PASS END=36217088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 36217089 . A . PASS END=36217090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:23,0 chr1 36217091 . C . PASS END=36217094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 36217095 . T . PASS END=36217095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 36217096 . G . PASS END=36217096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36217097 . A . PASS END=36217107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 36219346 . C . PASS END=36219357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 36219358 . G . PASS END=36219359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36219360 . C . PASS END=36219360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 36219361 . T . PASS END=36219367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,970:0,69,255:26,0 chr1 36219368 . A . PASS END=36219456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,986:0,81,255:37,0 chr1 36219457 . T . PASS END=36219457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 36219458 . C . PASS END=36219459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 36219460 . C . PASS END=36219460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 36219461 . A . PASS END=36219463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 36219464 . C . PASS END=36219464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 36219465 . A . PASS END=36219474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 36219475 . C . PASS END=36219490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:22:0,60,900:0,66,255:22,0 chr1 36219491 . T . PASS END=36219512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr1 36219513 . A . PASS END=36219518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 36219519 . T . PASS END=36219519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 36219520 . G . PASS END=36219537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,433:0,36,255:12,0 chr1 36225943 . C . PASS END=36226045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:38:0,93,1364:0,93,255:40,0 chr1 36226046 . A . PASS END=36226046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1479:0,72,255:40,0 chr1 36226047 . A . PASS END=36226047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 36226048 . A . PASS END=36226048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1270:0,74,255:38,0 chr1 36226049 . C . PASS END=36226093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:32:0,86,1239:0,86,255:35,0 chr1 36226094 . C . PASS END=36226094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1160:0,69,255:30,0 chr1 36226095 . T . PASS END=36226136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1297:0,80,255:36,0 chr1 36226137 . T . PASS END=36226137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr1 36226138 . G . PASS END=36226517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:36:0,87,1160:0,87,255:40,2 chr1 36226697 . T . PASS END=36226802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1271:0,89,255:40,0 chr1 36226803 . A . PASS END=36226805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:36:0,72,1080:0,77,255:30,0 chr1 36227599 . C . PASS END=36227671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:56:0,120,1800:0,135,255:40,0 chr1 36228005 . C . PASS END=36228082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:55:0,120,1800:0,132,255:40,0 chr1 36228761 . C . PASS END=36228922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:80:32:0,80,1131:0,80,255:40,0 chr1 36229867 . C . PASS END=36230298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:37:0,101,1343:0,101,255:40,0 chr1 36230299 . T . PASS END=36230299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:32,0 chr1 36230300 . A . PASS END=36230315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1260:0,89,255:34,0 chr1 36230819 . C . PASS END=36230927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,120,1800:0,129,255:40,0 chr1 36235448 . C . PASS END=36235463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1318:0,92,255:39,0 chr1 36235464 . C . PASS END=36235464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1333:0,62,255:36,0 chr1 36235465 . C . PASS END=36235471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1356:0,87,255:39,0 chr1 36274018 . A . PASS END=36274020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 36274021 . G . LowGQ END=36274022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,180:0,0,189:6,0 chr1 36274023 . G . PASS END=36274024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 36274025 . C . PASS END=36274025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 36274026 . G . PASS END=36274026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 36274027 . C . PASS END=36274030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 36274031 . G . PASS END=36274032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 36274033 . C . PASS END=36274033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 36274034 . C . PASS END=36274036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr1 36282483 . G . PASS END=36282483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1425:0,90,255:39,0 chr1 36282484 . A . PASS END=36282484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1311:0,73,255:38,0 chr1 36282485 . C . PASS END=36282645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:34:0,80,1215:0,80,255:40,0 chr1 36282646 . C . PASS END=36282648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr1 36288463 . G . PASS END=36288583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:43:0,87,1305:0,129,255:40,0 chr1 36290914 . G . PASS END=36290916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 36290917 . G . PASS END=36291072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:27:0,81,1039:0,81,255:40,0 chr1 36291073 . A . PASS END=36291073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:32,0 chr1 36291074 . C . PASS END=36291092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,97,255:34,0 chr1 36291093 . G . PASS END=36291095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,86,255:25,0 chr1 36291242 . A . PASS END=36291263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:97:46:0,97,1714:0,97,255:40,0 chr1 36291264 . A . PASS END=36291264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1266:0,77,255:40,0 chr1 36291265 . C . PASS END=36291370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:38:0,81,1250:0,81,255:40,0 chr1 36291371 . C . PASS END=36291371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1239:0,64,255:31,0 chr1 36291372 . A . PASS END=36291405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,89,255:35,0 chr1 36291406 . C . PASS END=36291416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,954:0,60,255:24,0 chr1 36291527 . T . PASS END=36291532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:36,0 chr1 36291533 . C . PASS END=36291533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:33,0 chr1 36291534 . A . PASS END=36291661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:36:0,102,1466:0,106,255:40,0 chr1 36292321 . A . PASS END=36292333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:38:0,84,1335:0,84,255:37,0 chr1 36292334 . T . PASS END=36292334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:36,0 chr1 36292335 . A . PASS END=36292436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:87:38:0,87,1343:0,87,255:40,0 chr1 36297028 . T . PASS END=36297175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:97:36:0,97,1208:0,97,255:40,0 chr1 36297413 . G . PASS END=36297532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,109,1710:0,109,255:40,0 chr1 36297641 . G . PASS END=36297768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:35:0,84,1260:0,95,255:40,0 chr1 36297769 . C . PASS END=36297786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:23:0,66,990:0,69,255:25,0 chr1 36298038 . A . PASS END=36298044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1226:0,105,255:36,0 chr1 36298045 . C . PASS END=36298045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:35,0 chr1 36298046 . A . PASS END=36298065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1213:0,87,255:40,0 chr1 36298066 . G . PASS END=36298171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:49:0,120,1800:0,134,255:40,0 chr1 36299591 . G . PASS END=36299596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 36299597 . C . PASS END=36299614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:24,0 chr1 36299615 . A . PASS END=36299615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:21,0 chr1 36299616 . A . PASS END=36299616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 36299617 . T . PASS END=36299617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 36299618 . C . PASS END=36299623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36299624 . G . PASS END=36299744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,995:0,84,255:36,0 chr1 36299745 . G . PASS END=36299745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 36299746 . T . PASS END=36299746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36299747 . T . PASS END=36299747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:26,0 chr1 36299748 . A . PASS END=36299755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 36299756 . T . PASS END=36299756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 36299757 . G . PASS END=36299757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36299758 . G . PASS END=36299759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 36299760 . A . PASS END=36299761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36299762 . G . PASS END=36299772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 36299773 . A . PASS END=36299773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 36299774 . T . PASS END=36299775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:24:0,51,765:0,72,255:17,0 chr1 36301435 . C . PASS END=36301438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 36301439 . G . PASS END=36301439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36301440 . G . PASS END=36301440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 36301441 . T . PASS END=36301442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 36301443 . A . PASS END=36301443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 36301444 . A . PASS END=36301449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 36301450 . T . PASS END=36301451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 36301452 . G . PASS END=36301460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,939:0,65,255:25,0 chr1 36301461 . C . PASS END=36301462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 36301463 . T . PASS END=36301463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,79,255:26,0 chr1 36301464 . C . PASS END=36301464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36301465 . T . PASS END=36301465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:25,0 chr1 36301466 . A . PASS END=36301468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 36301469 . T . PASS END=36301469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,948:0,60,255:27,0 chr1 36301470 . A . PASS END=36301594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1215:0,93,255:40,0 chr1 36306766 . G . PASS END=36306772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:17,0 chr1 36306773 . G . PASS END=36306784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 36306785 . C . PASS END=36306792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 36306793 . C . PASS END=36306816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:24,0 chr1 36306817 . C . PASS END=36306817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 36306818 . C . PASS END=36306818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:18,0 chr1 36306819 . C . PASS END=36306820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 36306821 . C . PASS END=36306840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:19,0 chr1 36306841 . A . PASS END=36306841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 36306842 . C . PASS END=36306844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,676:0,43,255:19,0 chr1 36306845 . T . PASS END=36306856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 36306857 . G . PASS END=36306857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 36306858 . T . PASS END=36306859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36306860 . G . PASS END=36306873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,675:0,44,255:19,0 chr1 36306874 . T . PASS END=36306874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 36306875 . G . PASS END=36306880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 36306881 . C . PASS END=36306883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 36306884 . A . PASS END=36306888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 36306889 . G . PASS END=36306904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,784:0,66,255:22,0 chr1 36306905 . C . PASS END=36306905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr1 36306906 . G . PASS END=36306908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 36306909 . T . PASS END=36306909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 36306910 . G . PASS END=36306928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,764:0,66,255:22,0 chr1 36306929 . A . PASS END=36306929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 36306930 . T . PASS END=36306947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,754:0,66,255:26,0 chr1 36306948 . A . PASS END=36306999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1033:0,80,255:37,0 chr1 36307000 . T . PASS END=36307000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr1 36307001 . C . PASS END=36307059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:32:0,90,1350:0,96,255:40,0 chr1 36307060 . A . PASS END=36307060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 36307061 . T . PASS END=36307066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 36307067 . G . PASS END=36307067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 36307068 . G . PASS END=36307074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 36307075 . G . PASS END=36307075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 36307076 . A . PASS END=36307081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 36307217 . G . PASS END=36307244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,119,1681:0,119,255:40,0 chr1 36307245 . G . PASS END=36307270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:92:57:0,92,1800:0,92,255:40,0 chr1 36307271 . G . LowGQ END=36307271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,9:74:0:74:0,0,2127:8,0,255:40,0 chr1 36307272 . A . PASS END=36307283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,5:75:84:74:0,84,1800:0,84,255:40,0 chr1 36307284 . G . PASS END=36307284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,11:77:26:77:0,26,2072:0,26,255:40,0 chr1 36307285 . A . PASS END=36307289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,197,255:40,0 chr1 36307290 . C . LowGQ END=36307290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,16:78:0:78:0,0,1820:54,0,255:40,0 chr1 36307291 . T . PASS END=36307294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:75:0,103,1800:0,103,255:40,0 chr1 36307295 . A . LowGQ END=36307295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,12:75:0:75:0,0,1998:55,0,255:40,0 chr1 36307296 . T . PASS END=36307302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:62:0,120,1800:0,136,255:40,0 chr1 36307303 . G . PASS END=36307303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,6:62:63:62:0,63,1639:0,63,255:40,0 chr1 36307304 . C . LowGQ END=36307304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,21:62:0:62:0,0,1079:176,0,255:35,1 chr1 36307305 . A . PASS END=36307312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:60:0,96,1564:0,96,255:40,0 chr1 36307313 . C . PASS END=36307313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,8:60:24:60:0,24,1518:0,24,255:40,0 chr1 36307314 . A . PASS END=36307314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:99:60:0,108,1963:0,108,255:40,0 chr1 36307315 . T . LowGQ END=36307315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,18:59:0:59:0,0,908:195,0,255:34,0 chr1 36307316 . C . PASS END=36307351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,104,1673:0,104,255:40,1 chr1 36315758 . G . PASS END=36315859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:32:0,86,1202:0,86,255:40,1 chr1 36316455 . G . PASS END=36316455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 36316456 . G . PASS END=36316464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:25,0 chr1 36316465 . G . PASS END=36316466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 36316467 . C . PASS END=36316487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:33,0 chr1 36316488 . T . PASS END=36316489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:31,0 chr1 36316490 . G . PASS END=36316533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:33:0,96,1409:0,99,255:40,0 chr1 36316534 . A . PASS END=36316570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,101,1510:0,101,255:40,0 chr1 36316571 . A C, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,22,0:0,19,0:120:208,123,0,1590,123,1590:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,20:0,0,22,19 chr1 36316572 . G . PASS END=36316608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1438:0,90,255:40,0 chr1 36316609 . T . PASS END=36316626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 36316627 . A . PASS END=36316639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 36316640 . T . PASS END=36316654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,698:0,54,255:18,0 chr1 36319098 . T . PASS END=36319104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,992:0,68,255:26,0 chr1 36319105 . G . PASS END=36319106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1111:0,84,255:30,0 chr1 36319107 . C . PASS END=36319107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 36319108 . A . PASS END=36319206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1094:0,82,255:40,0 chr1 36349023 . A . PASS END=36349045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 36349046 . A . PASS END=36349046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 36349047 . G . PASS END=36349047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 36354028 . C . PASS END=36354032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 36354033 . G . PASS END=36354040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:19,0 chr1 36354041 . C . PASS END=36354041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 36354042 . C . PASS END=36354042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 36354043 . T . PASS END=36354044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 36354045 . C . PASS END=36354045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 36354046 . C . PASS END=36354047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 36354048 . C . PASS END=36354048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 36354049 . C . PASS END=36354053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,984:0,68,255:26,0 chr1 36354054 . C . PASS END=36354055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 36354056 . G . PASS END=36354056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 36354057 . C . PASS END=36354200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:30:0,80,1096:0,80,255:40,0 chr1 36354201 . A . PASS END=36354206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:63:35:0,63,945:0,105,255:26,0 chr1 36354207 . A . PASS END=36354207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:57:35:0,57,855:0,105,255:19,0 chr1 36354208 . A . PASS END=36354208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:20,0 chr1 36354209 . C . PASS END=36354210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:54:34:0,54,810:0,102,255:19,0 chr1 36354211 . G . PASS END=36354211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:32:0,60,900:0,80,255:19,0 chr1 36358158 . G . PASS END=36358265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1166:0,83,255:40,0 chr1 36358266 . T . PASS END=36358268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1078:0,74,255:26,0 chr1 36358269 . C . PASS END=36358274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36358275 . A . PASS END=36358275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,911:0,56,255:25,0 chr1 36358276 . C . PASS END=36358278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36358698 . G . PASS END=36358701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 36358702 . A . PASS END=36358703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 36358704 . T . PASS END=36358704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 36358705 . T . PASS END=36358707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 36358708 . A . PASS END=36358711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 36358712 . G . PASS END=36358740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:23,0 chr1 36358741 . T . PASS END=36358745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 36358746 . A . PASS END=36358747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36358748 . G . PASS END=36358749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36358750 . T . PASS END=36358750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:27,0 chr1 36358751 . C . PASS END=36358861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1135:0,90,255:40,0 chr1 36358862 . G . PASS END=36358862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 36358863 . C . PASS END=36358867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 36358868 . G . PASS END=36358879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 36359201 . T . PASS END=36359208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 36359209 . G . PASS END=36359341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:28:0,82,1063:0,82,255:40,0 chr1 36359342 . C . PASS END=36359342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 36359343 . G . PASS END=36359379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,83,255:40,0 chr1 36359380 . T . PASS END=36359380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:25,0 chr1 36359381 . G . PASS END=36359385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 36359386 . G . PASS END=36359406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,984:0,65,255:25,0 chr1 36359407 . T . PASS END=36359407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 36359408 . G . PASS END=36359408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 36359409 . A . PASS END=36359409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:22,0 chr1 36359410 . T . PASS END=36359411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 36359636 . A . PASS END=36359636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36359638 . T . PASS END=36359641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 36359642 . A . PASS END=36359642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 36359643 . G . PASS END=36359648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 36359649 . G . PASS END=36359649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:28,0 chr1 36359650 . C . PASS END=36359773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1164:0,80,255:40,0 chr1 36359916 . G . PASS END=36359991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:40:0,87,1440:0,87,255:40,0 chr1 36359992 . T . PASS END=36359992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:30,0 chr1 36359993 . A . PASS END=36360003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:33:0,84,1225:0,84,255:33,0 chr1 36360723 . A . PASS END=36360727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 36360728 . C . PASS END=36360730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 36360731 . T . PASS END=36360732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36360733 . C . PASS END=36360745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 36360746 . G . PASS END=36360746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 36360747 . A . PASS END=36360747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 36360748 . C . PASS END=36360748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 36360749 . A . PASS END=36360753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1180:0,93,255:31,0 chr1 36360754 . G . PASS END=36360754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 36360755 . T . PASS END=36360870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1148:0,81,255:40,0 chr1 36367075 . G . PASS END=36367191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:32:0,81,1215:0,96,255:40,0 chr1 36367192 . C . PASS END=36367194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 36367549 . A . PASS END=36367549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 36367550 . T . PASS END=36367550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 36367551 . G . PASS END=36367590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,683:0,63,255:26,0 chr1 36367591 . T . PASS END=36367605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:29,0 chr1 36367606 . A . PASS END=36367607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36367608 . G . PASS END=36367609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36367610 . A . PASS END=36367612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 36367613 . A . PASS END=36367613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 36367614 . C . PASS END=36367617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 36367618 . A . PASS END=36367618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 36367619 . C . PASS END=36367620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 36367621 . G . PASS END=36367622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 36367623 . G . PASS END=36367641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,68,255:26,0 chr1 36367642 . C . PASS END=36367642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 36367643 . C . PASS END=36367654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr1 36367655 . T . PASS END=36367655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:21,0 chr1 36367656 . G . PASS END=36367666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:25,0 chr1 36367667 . G . PASS END=36367667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 36367668 . C . PASS END=36367668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 36367669 . C . PASS END=36367670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 36367671 . G . PASS END=36367671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 36367672 . G . PASS END=36367672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 36367673 . T . PASS END=36367680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 36367805 . A . PASS END=36367821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1125:0,86,255:36,0 chr1 36367822 . A . PASS END=36367822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1310:0,67,255:34,0 chr1 36367823 . C . PASS END=36367938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,109,1404:0,109,255:40,0 chr1 36372536 . G . PASS END=36372701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1260:0,87,255:40,0 chr1 36372702 . G . PASS END=36372702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 36372703 . G . PASS END=36372706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 36372707 . G . PASS END=36372707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36372708 . A . PASS END=36372708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36372709 . C . PASS END=36372720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,74,255:26,0 chr1 36379443 . C . PASS END=36379602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:29:0,87,1072:0,87,255:40,0 chr1 36379785 . C . PASS END=36379875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:36:0,96,1440:0,103,255:40,0 chr1 36380949 . G . PASS END=36380953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr1 36380954 . A . PASS END=36380954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 36380955 . G . PASS END=36380975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr1 36380976 . A . PASS END=36380994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,837:0,62,255:26,0 chr1 36380995 . T . PASS END=36380999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36381000 . G . PASS END=36381000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 36381001 . T . PASS END=36381094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1177:0,80,255:34,0 chr1 36381095 . C . PASS END=36381103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1061:0,71,255:26,0 chr1 36381104 . C . PASS END=36381104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36381105 . T . PASS END=36381134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,917:0,75,255:26,0 chr1 36381135 . C . PASS END=36381143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:18,0 chr1 36383194 . A . PASS END=36383328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:33:0,93,1319:0,97,255:40,0 chr1 36383923 . A . PASS END=36384024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,114,1706:0,120,255:40,0 chr1 36384608 . C . PASS END=36384820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,1100:0,87,255:40,0 chr1 36384821 . G . PASS END=36384829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,73,255:22,0 chr1 36384830 . C . PASS END=36384830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:19,0 chr1 36384831 . A . PASS END=36384832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 36384833 . C . PASS END=36384833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 36384834 . T . PASS END=36384839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 36384840 . A . PASS END=36384840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 36384841 . C . PASS END=36384841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36384842 . A . PASS END=36384848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,765:0,50,255:20,0 chr1 36384849 . A . PASS END=36384849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:16,0 chr1 36384850 . T . PASS END=36384855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,692:0,46,255:17,0 chr1 36385100 . T . PASS END=36385100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 36385101 . G . PASS END=36385310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:30:0,86,1255:0,86,255:40,0 chr1 36397028 . A . PASS END=36397036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,760:0,63,255:21,0 chr1 36397037 . G . PASS END=36397037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 36397038 . G . PASS END=36397045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 36397046 . G . PASS END=36397046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 36411293 . G . PASS END=36411309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,655:0,60,255:26,0 chr1 36411310 . C . PASS END=36411313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:31,0 chr1 36411314 . T . PASS END=36411433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:83:33:0,83,1136:0,83,255:40,0 chr1 36411434 . A . PASS END=36411434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr1 36411435 . A . PASS END=36411452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,91,255:36,0 chr1 36411453 . G . PASS END=36411463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,76,255:25,0 chr1 36411464 . G . PASS END=36411464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:54:27:0,54,810:0,64,255:17,0 chr1 36432556 . G . PASS END=36432676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,105,1755:0,105,255:40,0 chr1 36437625 . G . PASS END=36437627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 36437628 . G . PASS END=36437803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1141:0,82,255:40,0 chr1 36437804 . T . PASS END=36437804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 36437805 . G . PASS END=36437823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 36437824 . C . PASS END=36437826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:24,0 chr1 36437827 . C . PASS END=36437828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:23,0 chr1 36437829 . A . PASS END=36437831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 36437832 . A . PASS END=36437833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 36438976 . A . PASS END=36439112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:28:0,84,1023:0,84,255:40,1 chr1 36448222 . A . PASS END=36448253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:77:0,120,1800:0,209,255:40,0 chr1 36469942 . T . PASS END=36470076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:37:0,111,1336:0,111,255:40,0 chr1 36474291 . G . PASS END=36474378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,112,1677:0,112,255:40,0 chr1 36474498 . C . PASS END=36474510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 36474511 . T . PASS END=36474641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1000:0,81,255:40,0 chr1 36474642 . A . PASS END=36474642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:32,0 chr1 36474643 . G . PASS END=36474645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr1 36475076 . G . PASS END=36475195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:38:0,87,1372:0,87,255:40,0 chr1 36479231 . G . PASS END=36479233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 36479234 . A . PASS END=36479234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:30,0 chr1 36479235 . G . PASS END=36479353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:34:0,87,1291:0,87,255:40,0 chr1 36479516 . A . PASS END=36479523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 36479524 . A . PASS END=36479524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 36479525 . G . PASS END=36479569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:34:0,88,1182:0,88,255:40,0 chr1 36479570 . T . PASS END=36479570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1721:0,67,255:40,0 chr1 36479571 . T . PASS END=36479639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:35:0,89,1227:0,89,255:40,0 chr1 36479640 . A . PASS END=36479640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:30,0 chr1 36479641 . A . PASS END=36479647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1133:0,82,255:33,0 chr1 36479648 . A . PASS END=36479648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:29,0 chr1 36479649 . A . PASS END=36479649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 36492715 . G . PASS END=36492719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 36492720 . T . PASS END=36492720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr1 36492721 . C . PASS END=36492724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 36492725 . G . PASS END=36492730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 36492731 . C . PASS END=36492747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,599:0,43,255:19,0 chr1 36492748 . G . PASS END=36492750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:23,0 chr1 36492751 . T . PASS END=36492751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 36492752 . G . PASS END=36492755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 36492756 . G . PASS END=36492792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:29,0 chr1 36492793 . T . PASS END=36492793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 36492794 . G . PASS END=36492843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1163:0,86,255:31,0 chr1 36492844 . A . PASS END=36492862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr1 36492863 . A . PASS END=36492863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 36492864 . T . PASS END=36492887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:26,0 chr1 36492888 . C . PASS END=36492892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:25:0,42,630:0,62,255:18,0 chr1 36492893 . G . PASS END=36492899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:33:19:0,33,495:0,55,255:13,0 chr1 36499775 . C . PASS END=36499934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:98:36:0,98,1410:0,98,255:40,0 chr1 36501778 . A . PASS END=36501868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:37:0,92,1440:0,92,255:40,2 chr1 36505391 . G . PASS END=36505391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 36505392 . T . PASS END=36505392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:26,0 chr1 36505393 . T . PASS END=36505585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:81:27:0,81,978:0,81,255:40,0 chr1 36505908 . G . PASS END=36506042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:46:0,111,1665:0,138,255:40,0 chr1 36509048 . G . PASS END=36509149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,99,1451:0,107,255:40,0 chr1 36520547 . G . PASS END=36520738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,83,255:40,0 chr1 36520739 . C . PASS END=36520746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:26,0 chr1 36521238 . T . PASS END=36521346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,99,1485:0,108,255:40,0 chr1 36550523 . A . PASS END=36550525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 36550526 . G . PASS END=36550553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:18,0 chr1 36550554 . G . PASS END=36550555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 36550556 . T . PASS END=36550556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 36550557 . T . PASS END=36550567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 36550568 . G . PASS END=36550568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 36550569 . A . PASS END=36550572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 36550573 . G . PASS END=36550573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 36550574 . C . PASS END=36550574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36550575 . A . PASS END=36550575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 36550576 . C . PASS END=36550576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 36550577 . A . PASS END=36550577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 36550578 . C . PASS END=36550581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:25,0 chr1 36550582 . C . PASS END=36550600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 36550601 . A . PASS END=36550601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 36550602 . A . PASS END=36550609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:27,0 chr1 36550610 . C . PASS END=36550611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36550612 . G . PASS END=36550615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 36550616 . C . PASS END=36550616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 36550617 . G . PASS END=36550620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36550621 . T . PASS END=36550622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36550623 . C . PASS END=36550624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36550625 . T . PASS END=36550626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 36550627 . C . PASS END=36550634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:27,0 chr1 36550635 . T . PASS END=36550669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,906:0,65,255:26,0 chr1 36550670 . A . PASS END=36550670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 36550671 . A . PASS END=36550678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 36550764 . A . PASS END=36550889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,110,1543:0,110,255:40,1 chr1 36551437 . A . PASS END=36551442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1022:0,68,255:26,0 chr1 36551443 . G . PASS END=36551444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1108:0,84,255:29,0 chr1 36551445 . G . PASS END=36551445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,966:0,56,255:28,0 chr1 36551446 . T . PASS END=36551460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1185:0,80,255:31,0 chr1 36551461 . C . PASS END=36551461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 36551462 . T . PASS END=36551477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1113:0,86,255:35,0 chr1 36551478 . G . PASS END=36551478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:32,0 chr1 36551479 . C . PASS END=36551572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,90,255:40,0 chr1 36551573 . A . PASS END=36551573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36551574 . G . PASS END=36551574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 36551575 . G . PASS END=36551608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 36551609 . A . PASS END=36551617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 36551618 . T . PASS END=36551628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 36551629 . T . PASS END=36551637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:18,0 chr1 36551638 . C . PASS END=36551642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:18:0,33,495:0,54,255:13,0 chr1 36552305 . C . PASS END=36552448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1210:0,81,255:40,0 chr1 36552532 . C . PASS END=36552532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36552533 . T . PASS END=36552546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:29,0 chr1 36552547 . G . PASS END=36552547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 36552548 . C . PASS END=36552550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36552551 . T . PASS END=36552551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 36552552 . G . PASS END=36552554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 36552555 . A . PASS END=36552555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 36552556 . T . PASS END=36552565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36552566 . C . PASS END=36552567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:24,0 chr1 36552568 . G . PASS END=36552574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 36552575 . A . PASS END=36552582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,71,255:26,0 chr1 36552583 . A . PASS END=36552583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:24,0 chr1 36552584 . G . PASS END=36552624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:24:0,68,886:0,68,255:26,0 chr1 36552625 . C . PASS END=36552635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 36552636 . C . PASS END=36552646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 36552805 . A . PASS END=36552830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:38:0,89,1246:0,89,255:40,0 chr1 36552831 . A . PASS END=36552831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:72:43:0,72,1123:0,72,255:40,0 chr1 36552832 . G . PASS END=36552906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:37:0,85,1327:0,85,255:40,0 chr1 36552907 . A . PASS END=36552909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 36552910 . A . PASS END=36552911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 36552912 . T . PASS END=36552912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1300:0,68,255:25,0 chr1 36553040 . A . PASS END=36553040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 36553041 . C . PASS END=36553056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 36553057 . T . PASS END=36553057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 36553058 . G . PASS END=36553102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1124:0,83,255:32,0 chr1 36553103 . A . PASS END=36553105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36553106 . C . PASS END=36553108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36553109 . C . PASS END=36553109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 36553110 . T . PASS END=36553110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36553111 . G . PASS END=36553112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 36553113 . G . PASS END=36553121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 36553122 . T . PASS END=36553122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:28,0 chr1 36553123 . G . PASS END=36553132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 36553133 . C . PASS END=36553133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 36553134 . G . PASS END=36553138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36553139 . G . PASS END=36553141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1001:0,73,255:26,0 chr1 36553142 . G . PASS END=36553142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:24,0 chr1 36553143 . C . PASS END=36553155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:25,0 chr1 36553156 . G . PASS END=36553156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 36553157 . C . PASS END=36553174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 36553175 . C . PASS END=36553183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 36553329 . G . PASS END=36553330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36553331 . A . PASS END=36553333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 36553334 . G . PASS END=36553341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36553342 . T . PASS END=36553342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 36553343 . C . PASS END=36553360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1013:0,87,255:30,0 chr1 36553361 . G . PASS END=36553361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 36553362 . C . PASS END=36553362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 36553363 . T . PASS END=36553363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 36553364 . A . PASS END=36553385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,999:0,90,255:31,0 chr1 36553386 . A . PASS END=36553394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 36553395 . C . PASS END=36553399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36553400 . G . PASS END=36553400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 36553401 . C . PASS END=36553401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr1 36553402 . A . PASS END=36553409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:28:0,63,945:0,71,255:25,0 chr1 36553410 . T . PASS END=36553412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:27:0,48,720:0,71,255:16,0 chr1 36553574 . G . PASS END=36553586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 36553587 . G . PASS END=36553587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 36553588 . C . PASS END=36553589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 36553590 . C . PASS END=36553599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr1 36553600 . A . PASS END=36553600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:26,0 chr1 36553601 . C . PASS END=36553603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 36553604 . G . PASS END=36553604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 36553605 . G . PASS END=36553616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 36553617 . G . PASS END=36553617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 36553618 . C . PASS END=36553626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1100:0,87,255:30,0 chr1 36553627 . C . PASS END=36553627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 36553628 . C . PASS END=36553631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36553632 . A . PASS END=36553632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 36553633 . A . PASS END=36553635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:30,0 chr1 36553636 . C . PASS END=36553636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36553637 . C . PASS END=36553637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 36553638 . A . PASS END=36553638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36553639 . A . PASS END=36553639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,924:0,63,255:27,0 chr1 36553640 . C . PASS END=36553652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1074:0,80,255:31,0 chr1 36553653 . G . PASS END=36553653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 36553654 . A . PASS END=36553662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:33,0 chr1 36553663 . G . PASS END=36553663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:31,0 chr1 36553664 . C . PASS END=36553672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1233:0,89,255:36,0 chr1 36553673 . A G, 157.88 PASS DP=37;MQ=248.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,18,0:0,19,0:108:196,111,0,296,296,296:255,111,0:0,0:1.5788e+02,1.0788e+02,0.0000e+00,2.9265e+02,3.2742e+02,2.9566e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,18:0,0,16,21 chr1 36553674 . C . PASS END=36553710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1379:0,87,255:40,0 chr1 36553711 . C . PASS END=36553732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1117:0,80,255:39,0 chr1 36553733 . T . PASS END=36553745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,70,255:26,0 chr1 36553746 . A . PASS END=36553746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:23,0 chr1 36553747 . C . PASS END=36553756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:25,0 chr1 36553757 . A . PASS END=36553757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 36553758 . C . PASS END=36553760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 36553761 . A . PASS END=36553761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 36553762 . A . PASS END=36553763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 36553764 . A . PASS END=36553764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:22,0 chr1 36553765 . G . PASS END=36553765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 36553766 . C . PASS END=36553766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 36553767 . T . PASS END=36553769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 36553770 . C . PASS END=36553770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 36553771 . A . PASS END=36553772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36553773 . C . PASS END=36553773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 36553774 . T . PASS END=36553776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 36553777 . A . PASS END=36553787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:23:0,45,675:0,52,255:20,0 chr1 36554506 . A . PASS END=36554555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,382:0,30,255:12,0 chr1 36554556 . C . PASS END=36554564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 36554565 . C . PASS END=36554565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 36554566 . T . PASS END=36554573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 36554574 . C . PASS END=36554590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 36554591 . G . PASS END=36554595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 36554596 . C . PASS END=36554598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 36554599 . C . PASS END=36554599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 36554600 . T . PASS END=36554606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 36554607 . C . PASS END=36554607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 36554608 . T . PASS END=36554617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:12,0 chr1 36554618 . C . PASS END=36554628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 36554629 . G . PASS END=36554650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:13,0 chr1 36554651 . C . PASS END=36554665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 36554666 . A . PASS END=36554666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 36554667 . T . PASS END=36554672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 36554673 . G . PASS END=36554677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr1 36554678 . T . PASS END=36554678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 36554679 . G . PASS END=36554694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 36554695 . A . PASS END=36554696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 36554697 . G . PASS END=36554697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 36554698 . C . PASS END=36554707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 36554708 . A . PASS END=36554708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 36554709 . G . PASS END=36554716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 36556845 . A . PASS END=36556847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:27,0 chr1 36556848 . C . PASS END=36556850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 36556851 . T . PASS END=36556851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:26,0 chr1 36556852 . G . PASS END=36556874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1225:0,86,255:35,0 chr1 36556875 . T . PASS END=36556875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:30,0 chr1 36556876 . G . PASS END=36556936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1200:0,83,255:39,0 chr1 36556937 . C . PASS END=36556941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 36557219 . A . PASS END=36557222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,775:0,50,255:19,0 chr1 36557223 . G . PASS END=36557230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:25,0 chr1 36557231 . G . PASS END=36557234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 36557235 . A . PASS END=36557236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36557237 . G . PASS END=36557245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 36557246 . T . PASS END=36557246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr1 36557247 . G . PASS END=36557247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 36557248 . A . PASS END=36557248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr1 36557249 . C . PASS END=36557250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36557251 . G . PASS END=36557251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36557252 . G . PASS END=36557360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1259:0,84,255:40,0 chr1 36557361 . A . PASS END=36557361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:27,0 chr1 36557362 . A . PASS END=36557362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:27,0 chr1 36557363 . T . PASS END=36557368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 36557369 . T . PASS END=36557382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:25:0,62,914:0,62,255:24,0 chr1 36557383 . C . PASS END=36557383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,751:0,22,255:20,0 chr1 36557384 . T . PASS END=36557391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 36557392 . C . PASS END=36557404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:20:0,42,630:0,50,255:19,0 chr1 36557405 . C . PASS END=36557406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 36557407 . G . PASS END=36557426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:9:0,21,315:0,27,255:9,0 chr1 36557511 . T . PASS END=36557518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 36557519 . G . PASS END=36557523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 36557524 . C . PASS END=36557536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36557537 . A . PASS END=36557570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,582:0,45,255:19,0 chr1 36557571 . C . PASS END=36557571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36557572 . T . PASS END=36557572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,682:0,24,255:18,0 chr1 36557573 . G . PASS END=36557624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,676:0,41,255:19,0 chr1 36557625 . T . PASS END=36557690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 36557691 . A . PASS END=36557695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 36558023 . G . PASS END=36558023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 36558024 . T . PASS END=36558024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1271:0,53,255:34,0 chr1 36558025 . T . PASS END=36558123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:39:0,101,1435:0,101,255:40,0 chr1 36558698 . G . PASS END=36558727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:19,0 chr1 36558728 . C . PASS END=36558744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,806:0,63,255:26,0 chr1 36558745 . T . PASS END=36558757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 36558758 . T . PASS END=36558759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36558760 . G . PASS END=36558786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 36558787 . T . PASS END=36558787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 36558788 . T . PASS END=36558841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1079:0,83,255:32,0 chr1 36558842 . A . PASS END=36558844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 36558845 . C . PASS END=36558867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 36558868 . A . PASS END=36558869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 36558870 . T . PASS END=36558871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 36558872 . C . PASS END=36558872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 36558873 . T . PASS END=36558877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36558878 . C . PASS END=36558889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,1016:0,60,255:25,0 chr1 36558890 . T . PASS END=36558890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:23,0 chr1 36558891 . G . PASS END=36558892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 36558893 . A . PASS END=36558893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:23,0 chr1 36558894 . T . PASS END=36558902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 36558903 . A . PASS END=36558903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 36558904 . G . PASS END=36558918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,862:0,64,255:24,0 chr1 36558919 . A . PASS END=36558919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr1 36558920 . G . PASS END=36558923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 36558924 . T . PASS END=36558924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 36558925 . G . PASS END=36558934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 36558935 . A . PASS END=36558941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 36558942 . A . PASS END=36558942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:15,0 chr1 36558943 . G . PASS END=36558964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 36558965 . A . PASS END=36558968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 36558969 . T . PASS END=36558970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 36558971 . T . PASS END=36558979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,527:0,31,255:13,0 chr1 36558980 . A . PASS END=36558980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 36558981 . G . PASS END=36558987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 36563170 . T . PASS END=36563171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 36563172 . A . PASS END=36563172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr1 36563173 . T . PASS END=36563185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr1 36563186 . A . PASS END=36563186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 36563187 . A . PASS END=36563195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 36563196 . A . PASS END=36563203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,654:0,57,255:19,0 chr1 36563204 . G . PASS END=36563242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:22,0 chr1 36563243 . T . PASS END=36563251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 36563252 . A . PASS END=36563252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 36563253 . T . PASS END=36563269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,807:0,66,255:23,0 chr1 36563270 . T . PASS END=36563270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 36563271 . C . PASS END=36563274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,1 chr1 36563275 . G . PASS END=36563275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:20,0 chr1 36563276 . G . PASS END=36563277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 36563278 . C . LowGQ END=36563278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,615:3,0,255:18,0 chr1 36563279 . C . PASS END=36563281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36563282 . A . PASS END=36563282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,598:0,16,255:15,0 chr1 36563283 . G . LowGQ END=36563283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,579:0,0,255:15,0 chr1 36563284 . C . PASS END=36563284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 36563285 . T . LowGQ END=36563285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,565:0,0,255:15,0 chr1 36563286 . G . PASS END=36563286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 36563287 . G . PASS END=36563287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36563288 . A . PASS END=36563291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:46:21:0,46,662:0,46,255:19,0 chr1 36563292 . C . PASS END=36563292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,662:0,32,255:18,0 chr1 36563293 . G . PASS END=36563293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,568:0,5,255:17,0 chr1 36563294 . G . PASS END=36563298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 36563299 . A . PASS END=36563299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:18,0 chr1 36563300 . C . PASS END=36563301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 36563302 . A . PASS END=36563302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,621:0,30,255:19,0 chr1 36563303 . G . PASS END=36563303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,623:0,16,255:19,0 chr1 36563304 . A . PASS END=36563305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,681:0,63,255:22,0 chr1 36563306 . G . PASS END=36563306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,686:0,49,255:21,0 chr1 36563307 . C . PASS END=36563307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:20,0 chr1 36563308 . C . PASS END=36563308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36563309 . T . PASS END=36563310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:19,0 chr1 36563311 . G . PASS END=36563313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36563314 . C . PASS END=36563315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,723:0,49,255:19,0 chr1 36563316 . G . PASS END=36563316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,692:0,36,255:18,0 chr1 36563317 . G . PASS END=36563317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36563318 . T . PASS END=36563318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr1 36563319 . A . PASS END=36563320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:19,0 chr1 36563321 . C . PASS END=36563330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,739:0,52,255:19,0 chr1 36563331 . A . PASS END=36563331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:18,0 chr1 36563332 . C . PASS END=36563333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:47:21:0,47,721:0,47,255:20,0 chr1 36563334 . C . PASS END=36563335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,711:0,66,255:22,0 chr1 36563336 . T . PASS END=36563336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 36563337 . C . PASS END=36563337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,631:0,18,255:17,0 chr1 36563338 . G . PASS END=36563340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 36563341 . G . PASS END=36563341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:18,0 chr1 36563342 . G . PASS END=36563343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36563344 . A . PASS END=36563345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,755:0,36,255:19,0 chr1 36563346 . A . PASS END=36563346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 36563347 . G . PASS END=36563347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:18,0 chr1 36563348 . G . PASS END=36563349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr1 36563350 . G . PASS END=36563350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:17,0 chr1 36563351 . G . PASS END=36563351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 36563352 . C . PASS END=36563352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:16,0 chr1 36563353 . C . PASS END=36563358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:18,0 chr1 36563359 . G . PASS END=36563359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:17,0 chr1 36563360 . T . PASS END=36563360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 36563361 . T . PASS END=36563364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 36563365 . C . PASS END=36563365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:14,0 chr1 36563366 . T . PASS END=36563366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 36563367 . T . PASS END=36563376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,599:0,40,255:19,0 chr1 36563377 . C . PASS END=36563377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 36563378 . A . PASS END=36563389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,651:0,41,255:19,0 chr1 36563390 . G . PASS END=36563390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 36563391 . T . PASS END=36563398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,675:0,43,255:18,0 chr1 36563399 . A . PASS END=36563401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:20:0,24,706:0,24,255:18,0 chr1 36563402 . T . PASS END=36563404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:18,0 chr1 36563405 . A . PASS END=36563405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 36563406 . C . PASS END=36563437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:18:0,50,653:0,50,255:18,0 chr1 36563438 . G . PASS END=36563438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 36563439 . G . PASS END=36563444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 36563445 . T . PASS END=36563445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 36563446 . G . PASS END=36563491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,580:0,41,255:19,0 chr1 36563492 . G . PASS END=36563492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 36563493 . T . PASS END=36563493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 36563494 . C . PASS END=36563495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 36563496 . G . PASS END=36563496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 36563497 . G . PASS END=36563497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 36563498 . T . PASS END=36563499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 36563500 . A . PASS END=36563502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 36563503 . T . PASS END=36563503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 36563504 . T . PASS END=36563506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 36563507 . A . PASS END=36563507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 36563508 . C . PASS END=36563508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 36563509 . G . PASS END=36563512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36563513 . A . PASS END=36563513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:17,0 chr1 36563514 . T . PASS END=36563514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36563515 . G . PASS END=36563515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 36563516 . C . PASS END=36563518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 36563519 . G . PASS END=36563519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 36563520 . A . PASS END=36563523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 36563524 . G . PASS END=36563524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 36563525 . G . PASS END=36563525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36563526 . G . PASS END=36563526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 36563527 . G . PASS END=36563528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36563529 . A . PASS END=36563530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,784:0,50,255:20,0 chr1 36563531 . G . PASS END=36563531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 36563532 . G . PASS END=36563532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 36563533 . C . PASS END=36563557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,900:0,61,255:25,0 chr1 36563558 . G . PASS END=36563558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 36563559 . G . PASS END=36563560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 36563561 . G . PASS END=36563561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 36563562 . T . PASS END=36563581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,870:0,62,255:25,0 chr1 36563582 . C . PASS END=36563582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 36563583 . C . PASS END=36563591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 36563592 . A . PASS END=36563592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:21,0 chr1 36563593 . C . PASS END=36563597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 36563598 . G . PASS END=36563598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 36563599 . C . PASS END=36563600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 36563601 . T . PASS END=36563601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 36563602 . G . PASS END=36563608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36563609 . T . PASS END=36563610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 36563611 . G . PASS END=36563619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 36563620 . G . PASS END=36563647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:41:18:0,41,681:0,41,255:19,0 chr1 36563648 . T . PASS END=36563648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 36563649 . G . PASS END=36563655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 36563656 . T . PASS END=36563656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 36563657 . G . PASS END=36563679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 36563680 . C . PASS END=36563680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36563681 . C . PASS END=36563685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36563686 . G . PASS END=36563686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 36563687 . G . PASS END=36563687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36563688 . C . PASS END=36563691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 36563692 . A . PASS END=36563698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:14:0,27,405:0,42,255:9,0 chr1 36563699 . C . PASS END=36563700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 36563701 . C . LowGQ END=36563701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr1 36563702 . G . PASS END=36563702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 36563703 . G . PASS END=36563709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 36563710 . G . PASS END=36563724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:7:0,15,225:0,21,255:6,0 chr1 36563725 . G . PASS END=36563745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 36563746 . A . PASS END=36563750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 36563751 . C . PASS END=36563786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,255:9,0 chr1 36563787 . C . PASS END=36563791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 36563792 . G . PASS END=36563806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 36563807 . G . PASS END=36563808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 36563809 . G . PASS END=36563809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 36563810 . G . PASS END=36563820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 36563821 . G . PASS END=36563821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 36563822 . C . PASS END=36563823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 36563824 . T . PASS END=36563824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 36563825 . G . PASS END=36563825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 36563826 . G . PASS END=36563826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 36563827 . T . PASS END=36563827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 36563828 . T . PASS END=36563828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 36563829 . C . PASS END=36563832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 36563833 . C . PASS END=36563841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 36563842 . C . LowGQ END=36563842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:10,0 chr1 36563843 . G . PASS END=36563843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 36563844 . G . PASS END=36563844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:10,0 chr1 36563845 . C . PASS END=36563845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 36563846 . A . PASS END=36563850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 36563851 . T . LowGQ END=36563851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:10,0 chr1 36563852 . T . PASS END=36563858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 36563859 . C . PASS END=36563861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36563862 . T . PASS END=36563862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:13,0 chr1 36563863 . A . PASS END=36563864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 36563865 . G . PASS END=36563865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 36563866 . G . PASS END=36563878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 36563879 . T . PASS END=36563879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 36563880 . G . PASS END=36563907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 36563908 . C . PASS END=36563908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,457:0,11,255:11,0 chr1 36563909 . A . PASS END=36563920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 36563921 . C . PASS END=36563922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 36563923 . A . PASS END=36563924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36563925 . G . PASS END=36563925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 36563926 . G . PASS END=36563933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 36563934 . A . PASS END=36563935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 36563936 . T . PASS END=36563940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36563941 . T . PASS END=36563941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:11,0 chr1 36563942 . T . PASS END=36563945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36563946 . G . PASS END=36563961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 36563962 . C . PASS END=36563963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 36563964 . C . PASS END=36563966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 36563967 . C . PASS END=36563967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 36563968 . T . PASS END=36563972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 36563973 . C . PASS END=36563973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 36563974 . T . PASS END=36563984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 36563985 . C . PASS END=36563985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 36563986 . C . PASS END=36563998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 36563999 . T . PASS END=36564001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 36564002 . C . PASS END=36564016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 36564017 . G . PASS END=36564021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36564022 . A . PASS END=36564029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 36564030 . C . PASS END=36564030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 36564031 . A . PASS END=36564048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr1 36564049 . C . PASS END=36564126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,620:0,41,255:19,0 chr1 36564127 . T . PASS END=36564128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 36564129 . C . PASS END=36564134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36564135 . G . PASS END=36564151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 36564152 . G . PASS END=36564152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr1 36564153 . G . PASS END=36564162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 36564163 . C . PASS END=36564179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 36564180 . G . PASS END=36564182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 36564183 . C . PASS END=36564195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:8,0 chr1 36564196 . A . PASS END=36564208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,217:0,18,217:6,0 chr1 36564209 . C . PASS END=36564214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 36564215 . A . PASS END=36564216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 36564217 . A . PASS END=36564276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,274:0,24,255:9,0 chr1 36564277 . G . PASS END=36564277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:6,0 chr1 36564278 . A . PASS END=36564278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 36564279 . G . PASS END=36564279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 36564280 . T . PASS END=36564282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr1 36564283 . T . PASS END=36564287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 36564288 . C . PASS END=36564291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 36564292 . A . PASS END=36564298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 36564299 . C . PASS END=36564307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 36564308 . C . PASS END=36564325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,291:0,30,255:11,0 chr1 36564326 . C . PASS END=36564326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 36564327 . C . PASS END=36564332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 36564333 . T . PASS END=36564333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 36564334 . C . PASS END=36564369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,435:0,33,255:13,0 chr1 36564370 . C . PASS END=36564371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 36564372 . G . PASS END=36564372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 36564373 . G . PASS END=36564378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36564379 . T . PASS END=36564379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 36564380 . G . PASS END=36564381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 36564382 . C . PASS END=36564385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36564386 . C . PASS END=36564388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36564389 . T . PASS END=36564389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 36564390 . T . PASS END=36564392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36564393 . C . PASS END=36564395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36564396 . C . PASS END=36564398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 36564399 . A . PASS END=36564399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 36564400 . T . PASS END=36564414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,607:0,48,255:19,0 chr1 36564415 . T . PASS END=36564434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:21,0 chr1 36564435 . G . PASS END=36564435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 36564436 . G . PASS END=36564437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 36564438 . C . PASS END=36564467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,673:0,41,255:19,0 chr1 36564468 . T . PASS END=36564468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 36564469 . T . PASS END=36564477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 36564478 . A . PASS END=36564481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36564482 . C . PASS END=36564483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36564484 . T . PASS END=36564488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 36564489 . C . PASS END=36564489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 36564490 . C . PASS END=36564490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 36564491 . C . PASS END=36564495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 36564496 . G . PASS END=36564500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 36564501 . C . PASS END=36564501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 36564502 . T . PASS END=36564520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,451:0,39,255:13,0 chr1 36564521 . G . PASS END=36564525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36564526 . A . PASS END=36564526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 36564527 . C . PASS END=36564532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 36564533 . T . PASS END=36564534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36564535 . T . PASS END=36564535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 36564536 . C . PASS END=36564552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 36564553 . C . PASS END=36564585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,479:0,42,255:16,0 chr1 36564586 . A . PASS END=36564586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 36564587 . C . PASS END=36564587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36564588 . C . PASS END=36564588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 36564589 . A . PASS END=36564612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 36564613 . A . PASS END=36564624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 36564625 . T . LowGQ END=36564625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,357:8,0,255:9,0 chr1 36564626 . G . PASS END=36564626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 36564627 . G . PASS END=36564635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,315:0,20,255:8,0 chr1 36564636 . G . PASS END=36564636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 36564637 . C . PASS END=36564645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 36564646 . C . PASS END=36564646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 36564647 . T . PASS END=36564650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 36564651 . C . LowGQ END=36564651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 36564652 . C . PASS END=36564653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 36564654 . C . PASS END=36564655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 36564656 . C . PASS END=36564658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 36564659 . T . PASS END=36564660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:8,0 chr1 36564661 . A . PASS END=36564664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:8,0 chr1 36564665 . C . PASS END=36564666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 36564667 . C . PASS END=36564667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 36564668 . T . PASS END=36564678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 36564679 . A . PASS END=36564680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:9,0 chr1 36564681 . C . PASS END=36564711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 36564712 . T . PASS END=36564712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 36564713 . G . PASS END=36564733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,264:0,24,255:8,0 chr1 36564734 . G . LowGQ END=36564734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:7,0 chr1 36564735 . G . PASS END=36564769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 36564770 . A . PASS END=36564770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 36564771 . T . PASS END=36564776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 36564777 . T . PASS END=36564781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 36564782 . G . PASS END=36564782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 36564783 . A . PASS END=36564793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 36564794 . A . PASS END=36564809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 36564810 . G . PASS END=36564810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 36564811 . G . PASS END=36564827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr1 36564828 . G . PASS END=36564861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:13,0 chr1 36564862 . C . PASS END=36564872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 36564873 . G . PASS END=36564880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36564881 . A . PASS END=36564903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 36564904 . A . PASS END=36564907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36564908 . G . PASS END=36564931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr1 36564932 . G . PASS END=36564948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 36564949 . A . PASS END=36564951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 36564952 . C . PASS END=36564952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 36564953 . T . PASS END=36564953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 36564954 . G . PASS END=36564957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 36564958 . A . PASS END=36564958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 36564959 . T . PASS END=36565001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 36565002 . G . PASS END=36565002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:9,0 chr1 36565003 . G . PASS END=36565008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 36565009 . A . PASS END=36565009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 36565010 . G . PASS END=36565019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 36565020 . G . PASS END=36565031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,327:0,27,255:9,0 chr1 36565032 . T . PASS END=36565033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 36565034 . C . PASS END=36565036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 36565037 . G . PASS END=36565042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 36565043 . C . PASS END=36565043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 36565044 . C . PASS END=36565088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:13,0 chr1 36565651 . C . PASS END=36565654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 36565655 . G . PASS END=36565675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,872:0,62,255:26,0 chr1 36565676 . G . PASS END=36565677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 36565678 . A . PASS END=36565678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 36565679 . G . PASS END=36565690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 36565691 . A . PASS END=36565693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36565694 . T . PASS END=36565695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 36565696 . C . PASS END=36565702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:26,0 chr1 36565703 . C . PASS END=36565706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36565707 . G . PASS END=36565708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1100:0,63,255:28,0 chr1 36565709 . C . PASS END=36565859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:31:0,87,1235:0,92,255:40,0 chr1 36581309 . C . PASS END=36581353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1025:0,87,255:35,0 chr1 36591081 . C . PASS END=36591083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 36591084 . T . PASS END=36591084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 36591085 . G . PASS END=36591108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 36591109 . G . PASS END=36591109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 36591110 . G . PASS END=36591112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 36591113 . G . PASS END=36591154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,498:0,42,255:19,0 chr1 36591155 . G . PASS END=36591191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 36591192 . A . PASS END=36591192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 36591193 . C . PASS END=36591199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 36591200 . T . PASS END=36591200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 36591201 . C . PASS END=36591216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr1 36591217 . G . PASS END=36591237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:17,0 chr1 36591238 . G . PASS END=36591250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 36602804 . T . PASS END=36602905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,133,255:40,0 chr1 36602906 . C . PASS END=36602923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:41:0,87,1305:0,107,255:40,0 chr1 36603397 . C . PASS END=36603398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36603399 . T . PASS END=36603399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr1 36603400 . C . PASS END=36603579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:35:0,84,1136:0,84,255:40,0 chr1 36603717 . T . PASS END=36603833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:42:0,120,1800:0,126,255:40,0 chr1 36605321 . C . PASS END=36605444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:39:0,93,1391:0,102,255:40,0 chr1 36605670 . A . PASS END=36605767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:36:0,93,1395:0,93,255:40,0 chr1 36614938 . C . PASS END=36614962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,854:0,61,255:25,0 chr1 36614963 . T . PASS END=36614963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr1 36614964 . T . PASS END=36614975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 36614976 . A . PASS END=36614979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:19,0 chr1 36622019 . A . PASS END=36622021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 36622022 . G . PASS END=36622022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 36622023 . A . PASS END=36622031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 36622032 . C . LowGQ END=36622032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:9,0 chr1 36622033 . G . PASS END=36622058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:11,0 chr1 36622059 . C . PASS END=36622064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 36636572 . C . PASS END=36636579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 36636580 . G . LowGQ END=36636588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,78:0,0,82:3,0 chr1 36636589 . C . PASS END=36636600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,149:6,0 chr1 36636601 . A . PASS END=36636601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 36636602 . G . PASS END=36636603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 36636604 . C . PASS END=36636604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 36636605 . C . PASS END=36636606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 36636607 . T . PASS END=36636607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,125:0,1,125:5,0 chr1 36636608 . C . PASS END=36636608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 36636609 . T . PASS END=36636610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:5,0 chr1 36636611 . C . PASS END=36636619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,188:0,18,188:6,0 chr1 36636620 . A . PASS END=36636621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:5,0 chr1 36636622 . C . PASS END=36636623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 36636624 . T . LowGQ END=36636624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,86:34,0,120:5,0 chr1 36636625 . T . PASS END=36636625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr1 36636626 . C . PASS END=36636626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,119:0,4,119:6,0 chr1 36636627 . C . PASS END=36636627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,197:6,0 chr1 36636628 . C . LowGQ END=36636628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,131:12,0,143:5,0 chr1 36636629 . C . PASS END=36636629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 36636630 . C . LowGQ END=36636631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,180:10,0,189:6,0 chr1 36636632 . C . PASS END=36636632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 36636633 . A . LowGQ END=36636634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,2:0,0,68:6,0 chr1 36636635 . C . PASS END=36636635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,211:5,0 chr1 36636636 . A . LowGQ END=36636637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,39:0,0,90:5,0 chr1 36636638 . C . PASS END=36636638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr1 36636639 . A . PASS END=36636639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:5,0 chr1 36636640 . C . PASS END=36636641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,211:5,0 chr1 36636642 . A . LowGQ END=36636645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,3:7:0:7:0,0,39:0,0,82:5,0 chr1 36636646 . T . PASS END=36636646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,174:5,0 chr1 36636647 . C . PASS END=36636648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:1:6:0,1,147:0,1,147:5,0 chr1 36636649 . G . PASS END=36636650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,121:5,0 chr1 36636651 . C . LowGQ END=36636655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,55:0,0,93:5,0 chr1 36636656 . T . PASS END=36636656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr1 36636657 . C . PASS END=36636657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,125:0,1,125:5,0 chr1 36636658 . C . PASS END=36636664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,119:0,15,119:5,0 chr1 36636665 . C . LowGQ END=36636668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:5:0,0,86:0,0,88:5,0 chr1 36636669 . C . PASS END=36636679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr1 36636680 . C . PASS END=36636681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:8,0 chr1 36636682 . C . PASS END=36636684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 36636685 . G . PASS END=36636686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 36636687 . C . PASS END=36636687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 36636688 . A . PASS END=36636688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 36636689 . T . LowGQ END=36636689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,202:17,0,220:8,0 chr1 36636690 . G . PASS END=36636691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 36636692 . A . PASS END=36636701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 36636702 . T . PASS END=36636702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 36636703 . A . PASS END=36636703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 36636704 . G . PASS END=36636704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 36636705 . C . PASS END=36636705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 36636706 . T . PASS END=36636706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:10,0 chr1 36636707 . C . PASS END=36636707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 36636708 . T . PASS END=36636708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 36636709 . A . PASS END=36636710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 36636711 . G . PASS END=36636712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 36636713 . A . PASS END=36636715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:12,0 chr1 36636716 . T . PASS END=36636717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 36636718 . C . PASS END=36636719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 36636720 . A . PASS END=36636721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 36636722 . T . LowGQ END=36636722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,327:16,0,255:11,0 chr1 36636723 . G . PASS END=36636723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 36636724 . G . PASS END=36636724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 36636725 . A . PASS END=36636725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 36636726 . A . PASS END=36636728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36636729 . A . PASS END=36636733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,535:0,31,255:13,0 chr1 36636734 . G . PASS END=36636734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:12,0 chr1 36636735 . C . PASS END=36636738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 36636739 . T . PASS END=36636739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 36636740 . C . PASS END=36636740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 36636741 . A . PASS END=36636742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 36636743 . G . PASS END=36636745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 36636746 . A . PASS END=36636746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 36636747 . G . PASS END=36636750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 36636751 . G . PASS END=36636751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 36636752 . G . PASS END=36636755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 36636756 . T . PASS END=36636756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 36636757 . A . PASS END=36636757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 36636758 . G . PASS END=36636758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 36636759 . G . PASS END=36636763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 36636764 . C . PASS END=36636764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 36636765 . C . PASS END=36636779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:17,0 chr1 36636780 . G . PASS END=36636780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 36636781 . T . PASS END=36636787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr1 36636788 . C . PASS END=36636801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:24,0 chr1 36636802 . A . PASS END=36636802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:23,0 chr1 36636803 . G . PASS END=36636809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 36636810 . A . PASS END=36636810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:23,0 chr1 36636811 . C . PASS END=36636813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 36636814 . A . PASS END=36636814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr1 36636815 . C . PASS END=36636817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 36636818 . C . PASS END=36636835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1109:0,80,255:33,0 chr1 36636836 . G . PASS END=36636836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:32,0 chr1 36636837 . G . PASS END=36636839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:34,0 chr1 36636840 . T . PASS END=36636840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1169:0,47,255:32,0 chr1 36636841 . G . PASS END=36636885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1103:0,82,255:34,0 chr1 36636886 . C . PASS END=36636901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,80,255:26,0 chr1 36636902 . C . PASS END=36636908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36636909 . C . PASS END=36636916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 36637114 . A . PASS END=36637182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,99,1485:0,102,255:40,0 chr1 36638065 . C . PASS END=36638093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 36638094 . G . PASS END=36638098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 36638099 . G . PASS END=36638105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 36638106 . A . LowGQ END=36638106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:8,0 chr1 36638107 . A . PASS END=36638112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr1 36638113 . T . PASS END=36638123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 36638124 . C . PASS END=36638160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,182:0,21,182:8,0 chr1 36638161 . G . LowGQ END=36638161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:9,0,187:6,0 chr1 36638162 . T . PASS END=36638163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 36638164 . T . PASS END=36638164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 36638165 . T . PASS END=36638167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 36638168 . A . PASS END=36638168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 36638169 . G . PASS END=36638169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,202:0,7,202:5,0 chr1 36638170 . C . PASS END=36638208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 36638209 . A . PASS END=36638209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr1 36638210 . G . PASS END=36638220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 36638221 . A . LowGQ END=36638221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 36638222 . A . PASS END=36638223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 36638224 . A . LowGQ END=36638224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,2:5:0:5:0,0,83:18,0,101:3,0 chr1 36638225 . C . PASS END=36638228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 36638965 . G . PASS END=36638979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,832:0,62,255:26,0 chr1 36638980 . G . PASS END=36638981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 36638982 . C . PASS END=36638982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 36638983 . A . PASS END=36638988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 36638989 . C . PASS END=36638989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr1 36638990 . G . PASS END=36638990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 36638991 . G . PASS END=36639043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,64,255:26,0 chr1 36639044 . G . PASS END=36639048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr1 36639049 . C . PASS END=36639049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36639050 . T . PASS END=36639066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 36639067 . G . PASS END=36639068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 36639069 . A . PASS END=36639077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 36639078 . C . PASS END=36639079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36640499 . G . PASS END=36640501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 36640502 . G . PASS END=36640514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 36640515 . C . PASS END=36640515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 36640516 . G . PASS END=36640516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 36640517 . T . PASS END=36640517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 36640518 . G . PASS END=36640518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 36640519 . T . PASS END=36640519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 36640520 . C . PASS END=36640522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:26,0 chr1 36640523 . C . PASS END=36640523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 36640524 . A . PASS END=36640524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 36640525 . G . PASS END=36640526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 36640527 . T . PASS END=36640536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36640537 . A . PASS END=36640540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1139:0,84,255:30,0 chr1 36640541 . A . PASS END=36640541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 36640542 . C . PASS END=36640542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 36640543 . G . PASS END=36640543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1008:0,38,255:29,0 chr1 36640544 . T . PASS END=36640545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr1 36640546 . G . PASS END=36640547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr1 36640548 . C . PASS END=36640554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 36640555 . A . PASS END=36640555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 36640556 . T . PASS END=36640558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:30,0 chr1 36640559 . A . PASS END=36640560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 36640561 . A . PASS END=36640561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 36640562 . A . PASS END=36640562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:28,0 chr1 36640563 . G . PASS END=36640564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36640565 . G . PASS END=36640565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 36640566 . G . PASS END=36640566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1021:0,57,255:26,0 chr1 36640567 . C . PASS END=36640569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36640570 . T . PASS END=36640570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 36640571 . C . PASS END=36640575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36640576 . T . PASS END=36640576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:27,0 chr1 36640577 . C . PASS END=36640583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 36640584 . C . PASS END=36640602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:24:0,60,900:0,71,255:25,0 chr1 36640603 . A . PASS END=36640603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 36640604 . G . PASS END=36640604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 36640605 . T . PASS END=36640609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:52:22:0,52,754:0,52,255:19,0 chr1 36641800 . A . PASS END=36641800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 36641801 . T . PASS END=36641814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 36641815 . T . PASS END=36641815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 36641816 . G . PASS END=36641816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 36641817 . A . PASS END=36641817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 36641818 . G . PASS END=36641821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 36641822 . A . PASS END=36641822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 36641823 . T . PASS END=36641846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,653:0,44,255:19,0 chr1 36641847 . C . PASS END=36641851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 36641852 . G . PASS END=36641853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 36641854 . C . PASS END=36641854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36641855 . G . PASS END=36641861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,739:0,50,255:19,0 chr1 36641862 . C . PASS END=36641862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36641863 . T . PASS END=36641863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:19,0 chr1 36641864 . C . PASS END=36641870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:23,0 chr1 36641871 . C . PASS END=36641871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 36641872 . T . PASS END=36641872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 36641873 . T . PASS END=36641873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 36641874 . G . PASS END=36641874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 36641875 . C . PASS END=36641875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 36641876 . T . PASS END=36641883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 36641884 . G . PASS END=36641884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 36641885 . C . PASS END=36641892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 36641893 . T . PASS END=36641893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 36641894 . C . PASS END=36641899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 36641900 . G . PASS END=36641900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,671:0,52,255:21,0 chr1 36641901 . C . PASS END=36641908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 36641909 . C . PASS END=36641909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 36641910 . G . PASS END=36641912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36641913 . C . PASS END=36641913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:19,0 chr1 36641914 . G . PASS END=36641918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36641919 . C . PASS END=36641937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,644:0,43,255:17,0 chr1 36641938 . C . PASS END=36641938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,457:0,4,255:14,0 chr1 36641939 . T . PASS END=36641942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 36641943 . A . PASS END=36641943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 36641944 . G . PASS END=36641947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 36641948 . C . PASS END=36641948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 36641949 . C . PASS END=36641953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36641954 . G . PASS END=36641961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,482:0,31,255:14,0 chr1 36641962 . G . PASS END=36641962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:9,0 chr1 36641963 . G . PASS END=36641965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 36641966 . A . PASS END=36641967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 36641968 . G . PASS END=36641970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 36641971 . C . PASS END=36641973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 36641974 . G . PASS END=36641974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 36641975 . C . PASS END=36641976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 36641977 . T . PASS END=36641977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:7,0 chr1 36641978 . G . PASS END=36641985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:8,0 chr1 36641986 . G . PASS END=36641986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 36641987 . G . LowGQ END=36641987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,294:9,0,255:8,0 chr1 36641988 . C . PASS END=36641997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 36641998 . A . PASS END=36641998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr1 36641999 . C . PASS END=36642010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 36642011 . C . PASS END=36642017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,243:6,0 chr1 36642018 . G . PASS END=36642019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 36642020 . C . PASS END=36642031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:6,0 chr1 36642032 . C . PASS END=36642032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 36642033 . C . PASS END=36642041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 36642042 . G . PASS END=36642075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr1 36642076 . C . PASS END=36642090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:13,0 chr1 36642091 . G . PASS END=36642106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 36642107 . T . PASS END=36642116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36642117 . G . PASS END=36642125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 36642126 . A . PASS END=36642170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 36642171 . G . PASS END=36642182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 36642298 . G . PASS END=36642316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,623:0,54,255:19,0 chr1 36642317 . A . PASS END=36642339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,646:0,54,255:19,0 chr1 36642340 . A . PASS END=36642345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,695:0,63,255:22,0 chr1 36642346 . A . PASS END=36642346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 36642347 . A . PASS END=36642350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 36642351 . T . PASS END=36642351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 36642352 . G . PASS END=36642353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36642354 . C T, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=2.822;FractionInformativeReads=0.920;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:6,4,0:4,9,0:46:85,0,46,185,185,185:255,0,255:9,0:5.0000e+01,9.8109e-05,4.9004e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,5,9,4:7,3,6,7 chr1 36642355 . C . PASS END=36642355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 36642356 . T . PASS END=36642366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 36642367 . C . PASS END=36642368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36642369 . C . PASS END=36642390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 36642391 . C . PASS END=36642392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 36642393 . G . PASS END=36642419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 36642420 . T C, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.510;ReadPosRankSum=2.888;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,10,0:0.556,0.000:18:5,3,0:3,7,0:48:85,0,50,358,278,636:255,0,226:7,0:5.0000e+01,6.7822e-05,5.2515e+01,3.5767e+02,3.1292e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,7,2,8:2,6,7,3 chr1 36642421 . G . PASS END=36642433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 36642434 . C . PASS END=36642443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:11,0 chr1 36643474 . C . PASS END=36643494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,380:0,33,255:13,0 chr1 36643495 . A . PASS END=36643495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36643496 . T . PASS END=36643496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 36643497 . C . PASS END=36643513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,446:0,42,255:16,0 chr1 36643514 . T . PASS END=36643515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 36643516 . G . PASS END=36643516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 36643517 . C . PASS END=36643517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 36643518 . A . PASS END=36643520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 36643521 . G . PASS END=36643521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 36643522 . G . PASS END=36643524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 36643525 . T . PASS END=36643525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 36643526 . G . PASS END=36643549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,675:0,43,255:19,0 chr1 36643550 . C . PASS END=36643550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr1 36643551 . C . PASS END=36643562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr1 36643563 . T . PASS END=36643563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr1 36643564 . G . PASS END=36643622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,538:0,40,255:19,0 chr1 36643623 . G . PASS END=36643633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 36643634 . G . PASS END=36643634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 36643635 . C . PASS END=36643635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36643636 . A . PASS END=36643636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 36643637 . A . PASS END=36643637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36643638 . A . PASS END=36643638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,647:0,52,255:21,0 chr1 36643639 . G . PASS END=36643646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 36643647 . C . PASS END=36643647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 36643648 . C . PASS END=36643648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 36643649 . A . PASS END=36643653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 36643654 . C . PASS END=36643654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 36643655 . G . PASS END=36643656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 36643657 . A . PASS END=36643657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 36643658 . G . PASS END=36643682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:25,0 chr1 36643683 . A . PASS END=36643683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:23,0 chr1 36643684 . G . PASS END=36643705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:24,0 chr1 36643706 . G . PASS END=36643706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 36643707 . A . PASS END=36643727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr1 36643728 . C . PASS END=36643739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:20:0,49,745:0,49,255:19,0 chr1 36643740 . C . PASS END=36643740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36643741 . G . PASS END=36643741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 36643742 . G . PASS END=36643743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 36643744 . G . PASS END=36643758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,712:0,44,255:18,0 chr1 36643759 . A . PASS END=36643760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr1 36643761 . C . PASS END=36643766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 36643767 . C . PASS END=36643767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 36643768 . C . PASS END=36643770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36643771 . G . PASS END=36643772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:12,0 chr1 36643773 . A . PASS END=36643774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 36643775 . G . PASS END=36643776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 36643777 . G . PASS END=36643789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 36643790 . G . PASS END=36643800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,23,255:9,0 chr1 36643801 . A . PASS END=36643801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:6,0 chr1 36643802 . G . PASS END=36643802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 36644020 . A . PASS END=36644020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 36644021 . C . PASS END=36644024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 36644025 . G . PASS END=36644025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:9,0 chr1 36644026 . C . PASS END=36644026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 36644027 . T . PASS END=36644027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:9,0 chr1 36644028 . G . PASS END=36644028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 36644029 . T . PASS END=36644029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 36644030 . C . PASS END=36644036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 36644037 . T . PASS END=36644037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 36644038 . C . PASS END=36644050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,382:0,36,255:13,0 chr1 36644051 . T . PASS END=36644051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr1 36644052 . G . PASS END=36644056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 36644057 . C . PASS END=36644059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 36644060 . G . PASS END=36644060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 36644061 . G . PASS END=36644062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 36644063 . G . PASS END=36644063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36644064 . A . PASS END=36644064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,380:0,9,255:11,0 chr1 36644065 . C . PASS END=36644067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36644068 . C . PASS END=36644068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,519:0,17,255:14,1 chr1 36644069 . T . PASS END=36644069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,454:0,9,255:15,0 chr1 36644070 . A . PASS END=36644070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36644071 . G . PASS END=36644071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:14,0 chr1 36644072 . C . PASS END=36644074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36644075 . A . PASS END=36644075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,354:0,28,255:14,0 chr1 36644076 . C . PASS END=36644078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36644079 . A . PASS END=36644079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,441:0,15,255:13,0 chr1 36644080 . T . PASS END=36644082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36644083 . C . PASS END=36644083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,460:0,17,255:14,0 chr1 36644084 . C . PASS END=36644084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36644085 . G . PASS END=36644085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr1 36644086 . G . PASS END=36644087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:15,0 chr1 36644088 . A . PASS END=36644088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 36644089 . C . PASS END=36644093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 36644094 . G . PASS END=36644095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr1 36644096 . C . PASS END=36644096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 36644097 . C . PASS END=36644097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,541:0,34,255:16,0 chr1 36644098 . G . PASS END=36644100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr1 36644101 . A . PASS END=36644101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 36644102 . A . PASS END=36644102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr1 36644103 . G . PASS END=36644103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,499:0,12,255:16,0 chr1 36644104 . A . PASS END=36644105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 36644106 . G . PASS END=36644106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 36644107 . C . PASS END=36644110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 36644111 . T . PASS END=36644112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 36644113 . G . PASS END=36644119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 36644120 . G . PASS END=36644120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 36644121 . G . PASS END=36644122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 36644123 . T . PASS END=36644123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:14,0 chr1 36644124 . G . PASS END=36644124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36644125 . A . PASS END=36644125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 36644126 . G . PASS END=36644126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36644127 . A . PASS END=36644128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,541:0,31,255:14,0 chr1 36644129 . G . PASS END=36644130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36644131 . G . PASS END=36644141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36644142 . C . PASS END=36644151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:14,0 chr1 36644152 . G . PASS END=36644152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36644153 . G . PASS END=36644165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 36644166 . C . PASS END=36644166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 36644167 . A . PASS END=36644171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 36644172 . C . PASS END=36644172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 36644173 . G . PASS END=36644180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 36644181 . C . PASS END=36644182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 36644183 . G . PASS END=36644184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36644185 . C . PASS END=36644185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 36644186 . A . PASS END=36644191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 36644192 . G . PASS END=36644192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 36644193 . G . PASS END=36644197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 36644286 . G . PASS END=36644286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 36644287 . C . PASS END=36644287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:36,0 chr1 36644288 . G . PASS END=36644289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:39:0,90,1372:0,90,255:37,0 chr1 36644290 . A . PASS END=36644290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:28:39:0,28,1135:0,28,255:34,0 chr1 36644291 . T . PASS END=36644292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1381:0,81,255:39,0 chr1 36644293 . C . PASS END=36644293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:36,0 chr1 36644294 . G . PASS END=36644424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:39:0,86,1270:0,86,255:40,1 chr1 36644522 . A . PASS END=36644579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1318:0,81,255:39,2 chr1 36644580 . A . PASS END=36644580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1434:0,54,255:38,2 chr1 36644581 . A . PASS END=36644626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1421:0,81,255:40,0 chr1 36644863 . C . PASS END=36644863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:26,0 chr1 36644864 . G . PASS END=36644874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1143:0,96,255:33,0 chr1 36644875 . A . PASS END=36644875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1078:0,69,255:30,0 chr1 36644876 . T . PASS END=36644906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1119:0,86,255:32,0 chr1 36644907 . T . PASS END=36644907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 36644908 . G . PASS END=36644916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1096:0,90,255:30,0 chr1 36645113 . C . PASS END=36645158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:33:0,89,1271:0,89,255:36,0 chr1 36645267 . A . PASS END=36645268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36645269 . C . PASS END=36645269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36645270 . C . PASS END=36645270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36645271 . T . PASS END=36645271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 36645272 . G . PASS END=36645275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36645276 . A . PASS END=36645278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:25,0 chr1 36645279 . C . PASS END=36645279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:24,0 chr1 36645280 . T . PASS END=36645289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,914:0,62,255:26,0 chr1 36645290 . C . PASS END=36645291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 36645292 . G . PASS END=36645293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36645294 . C . PASS END=36645296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36645297 . C . PASS END=36645298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 36645299 . G . PASS END=36645299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36645300 . G . PASS END=36645300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 36645301 . G . PASS END=36645301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36645302 . C . PASS END=36645309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1024:0,71,255:26,0 chr1 36645310 . G . PASS END=36645310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36645311 . G . PASS END=36645312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1078:0,74,255:26,0 chr1 36645313 . G . PASS END=36645321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 36645322 . G . PASS END=36645332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 36645333 . C . PASS END=36645333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36645334 . C . PASS END=36645346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1008:0,68,255:25,0 chr1 36645347 . C . PASS END=36645347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 36645348 . C . PASS END=36645357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,892:0,61,255:22,0 chr1 36645475 . T . PASS END=36645491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr1 36645492 . T . PASS END=36645495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36645496 . A . PASS END=36645497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36645498 . C . PASS END=36645528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,535:0,45,255:19,0 chr1 36645529 . A . PASS END=36645553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,892:0,66,255:23,0 chr1 36645554 . A . PASS END=36645554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 36645555 . C . PASS END=36645557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 36645558 . A . PASS END=36645558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 36645559 . C . PASS END=36645564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 36645565 . C . PASS END=36645565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 36645566 . T . PASS END=36645574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 36645575 . A . PASS END=36645575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 36645576 . A . PASS END=36645585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 36645586 . C . PASS END=36645586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 36645587 . C . PASS END=36645594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:25,0 chr1 36645595 . A . PASS END=36645595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:22,0 chr1 36645596 . G . PASS END=36645598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 36645599 . A . PASS END=36645611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:19:0,57,646:0,57,255:19,0 chr1 36645612 . T . PASS END=36645624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 36645625 . A . PASS END=36645625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 36645626 . G . PASS END=36645637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 36645638 . A . PASS END=36645638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 36645639 . A . PASS END=36645640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36645641 . G . PASS END=36645641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 36645642 . C . PASS END=36645657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr1 36645658 . G . PASS END=36645658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:17,0 chr1 36645659 . C . PASS END=36645668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:18,0 chr1 36645849 . A . PASS END=36645859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,117,1755:0,122,255:40,0 chr1 36748165 . A . PASS END=36748301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:42:0,83,1395:0,83,255:40,0 chr1 36751969 . T . PASS END=36751986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,703:0,63,255:26,0 chr1 36751987 . A . PASS END=36752114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,948:0,81,255:40,0 chr1 36752115 . C . PASS END=36752125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1305:0,95,255:37,0 chr1 36752126 . T . PASS END=36752126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1181:0,67,255:34,0 chr1 36752127 . A . PASS END=36752151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,100,1334:0,100,255:39,0 chr1 36752152 . C T, 50.00 PASS DP=36;MQ=225.85;MQRankSum=0.870;ReadPosRankSum=1.566;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,18,0:0.500,0.000:36:7,8,0:11,10,0:48:85,0,50,644,644,1288:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,9,9:8,10,13,5 chr1 36752153 . C . PASS END=36752189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:36:0,97,1259:0,97,255:39,0 chr1 36752190 . C . PASS END=36752248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1241:0,89,255:39,0 chr1 36752249 . A . PASS END=36752249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:34,0 chr1 36752250 . G . PASS END=36752295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1255:0,86,255:34,0 chr1 36752296 . G . PASS END=36752317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:25:0,72,1080:0,74,255:26,0 chr1 36752318 . T . PASS END=36752318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:24,0 chr1 36752319 . C . PASS END=36752381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,795:0,62,255:26,0 chr1 36752382 . C . PASS END=36752383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 36752384 . A . PASS END=36752395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr1 36752396 . C . PASS END=36752407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 36752408 . G . PASS END=36752415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 36752416 . T . PASS END=36752426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 36752427 . A . PASS END=36752427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 36752428 . T . PASS END=36752432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 36752433 . C T, 112.11 PASS DP=22;MQ=128.18;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,12,0:0,10,0:63:150,66,0,853,66,853:255,66,0:0,0:1.1211e+02,6.3214e+01,2.0709e-06,4.5000e+02,9.7984e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,14:0,0,14,8 chr1 36752434 . C . PASS END=36752461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 36752462 . T . PASS END=36752463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 36752464 . T . PASS END=36752464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36752465 . C . PASS END=36752468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 36752469 . A . PASS END=36752470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36752471 . A . PASS END=36752498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,651:0,51,255:19,0 chr1 36752499 . G . PASS END=36752499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 36752500 . G . PASS END=36752519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 36752520 . C . PASS END=36752531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 36752532 . C . PASS END=36752538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36752539 . C . PASS END=36752539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36752540 . T . PASS END=36752550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 36752551 . T . PASS END=36752551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 36752552 . G . PASS END=36752554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 36752555 . C . PASS END=36752555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 36752556 . T . PASS END=36752571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 36752572 . A . PASS END=36752572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 36752573 . A . PASS END=36752594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,543:0,41,255:19,0 chr1 36752595 . T . PASS END=36752595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 36752596 . C . PASS END=36752602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 36752603 . G . PASS END=36752603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 36752604 . T . PASS END=36752604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 36752605 . G . PASS END=36752609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 36752610 . T . PASS END=36752610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 36752611 . G . PASS END=36752620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 36752621 . T . PASS END=36752621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 36752622 . C . PASS END=36752652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr1 36752653 . T . PASS END=36752655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 36752656 . T . PASS END=36752679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,864:0,62,255:26,0 chr1 36752680 . G . PASS END=36752680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:22,0 chr1 36752681 . G . PASS END=36752688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:24,0 chr1 36752689 . T . PASS END=36752689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,853:0,31,255:23,0 chr1 36752690 . C . PASS END=36752770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:23,0 chr1 36752771 . A . PASS END=36752773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 36752774 . A . PASS END=36752784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 36752785 . T . PASS END=36752791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 36752792 . C . PASS END=36752796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 36752797 . A . PASS END=36752797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr1 36752798 . T . PASS END=36752841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,861:0,66,255:24,0 chr1 36752842 . T . PASS END=36752869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 36752870 . A . PASS END=36752870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:13,0 chr1 36752871 . G . PASS END=36752871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36754661 . G . PASS END=36755327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:32:0,80,1139:0,80,255:40,0 chr1 36755328 . A . PASS END=36755328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:28,0 chr1 36755329 . A . PASS END=36755340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1196:0,85,255:29,0 chr1 36755341 . A . PASS END=36755341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 36755342 . C . PASS END=36755344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36755345 . T . PASS END=36755365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,67,255:26,0 chr1 36756975 . A . PASS END=36756978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 36756979 . A . PASS END=36756979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 36756980 . G . PASS END=36756981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 36756982 . G . PASS END=36756982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 36756983 . G . PASS END=36756987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 36756988 . T . PASS END=36756988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 36756989 . T . PASS END=36756989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36756990 . G . PASS END=36756994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr1 36756995 . A . PASS END=36756995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 36756996 . G . PASS END=36756996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 36756997 . G . PASS END=36756997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 36756998 . A . PASS END=36757147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:31:0,93,1058:0,93,255:40,0 chr1 36758199 . A . PASS END=36758310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:54:0,102,1530:0,146,255:40,0 chr1 36759452 . G . PASS END=36759536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,109,1452:0,109,255:40,0 chr1 36762184 . G . PASS END=36762358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1225:0,86,255:40,1 chr1 36762359 . C . PASS END=36762371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:40:0,107,1419:0,107,255:40,0 chr1 36766487 . G . PASS END=36766509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,598:0,40,255:19,0 chr1 36766510 . G . PASS END=36766518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:25,0 chr1 36766519 . C . PASS END=36766519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 36766520 . C . PASS END=36766522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 36766523 . C . PASS END=36766528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 36766529 . T . PASS END=36766529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 36766530 . T . PASS END=36766540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:30,0 chr1 36766541 . A . PASS END=36766542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:29,0 chr1 36766543 . C . PASS END=36766545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 36766546 . A . PASS END=36766546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 36766547 . C . PASS END=36766685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:32:0,82,990:0,82,255:40,0 chr1 36767154 . C . PASS END=36767154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 36767155 . A . PASS END=36767155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 36767156 . G . PASS END=36767254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:30:0,87,1150:0,90,255:40,0 chr1 36767255 . G . PASS END=36767255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,9:63:39:63:0,39,1617:0,39,255:40,0 chr1 36767256 . T . PASS END=36767297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,116,1739:0,116,255:40,0 chr1 36769397 . C . PASS END=36769411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 36769412 . G . PASS END=36769430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:19,0 chr1 36769431 . G . PASS END=36769477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,775:0,60,255:26,0 chr1 36769478 . C . PASS END=36769479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:25,1 chr1 36769480 . G . PASS END=36769506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:26,0 chr1 36769507 . C . PASS END=36769511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36769512 . A . PASS END=36769513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:26,1 chr1 36769514 . T . PASS END=36769516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,946:0,67,255:26,0 chr1 36769517 . G . PASS END=36769522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 36769523 . G . PASS END=36769524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr1 36769525 . C . PASS END=36769525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36769526 . A . PASS END=36769526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:26,0 chr1 36769527 . A . PASS END=36769528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1141:0,80,255:28,0 chr1 36769529 . T . PASS END=36769529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:27,0 chr1 36769530 . T . PASS END=36769530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 36769531 . C . PASS END=36769531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1133:0,68,255:28,0 chr1 36769532 . A . PASS END=36769532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 36769533 . G . PASS END=36769533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:28,0 chr1 36769534 . T . PASS END=36769538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1109:0,80,255:28,0 chr1 36769539 . A . PASS END=36769539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr1 36769540 . G . PASS END=36769541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36769542 . A . PASS END=36769542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 36769543 . A . PASS END=36769543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36769544 . G . PASS END=36769544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 36769545 . G . PASS END=36769547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 36769548 . A . PASS END=36769551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 36769552 . T . PASS END=36769552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36769553 . G . PASS END=36769554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 36769555 . A . PASS END=36769555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36769556 . G . PASS END=36769557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:27,0 chr1 36769558 . C . PASS END=36769559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:30:0,55,1063:0,55,255:28,0 chr1 36769560 . A . PASS END=36769560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36769561 . C . PASS END=36769573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,77,255:28,0 chr1 36769574 . G . PASS END=36769574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 36769575 . A . PASS END=36769590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,868:0,69,255:23,0 chr1 36769591 . G . PASS END=36769592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 36769593 . A . PASS END=36769598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36769599 . T . PASS END=36769603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:20:0,57,855:0,60,255:19,0 chr1 36769604 . C . PASS END=36769605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36769606 . C . PASS END=36769606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 36769607 . A . PASS END=36769607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36769608 . C . PASS END=36769612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 36769613 . G . PASS END=36769613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:18,0 chr1 36769614 . A . PASS END=36769618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 36770075 . G . PASS END=36770080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:91:56:0,91,1800:0,91,255:40,0 chr1 36770081 . G . PASS END=36770081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,6:69:48:69:0,48,1888:0,48,255:40,0 chr1 36770082 . T . PASS END=36770092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:70:0,108,1800:0,108,255:40,0 chr1 36770093 . G . PASS END=36770093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,7:71:68:71:0,68,1926:0,68,255:40,0 chr1 36770094 . A . PASS END=36770102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:94:71:0,94,1800:0,94,255:40,0 chr1 36770103 . A . PASS END=36770125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,4:72:99:70:0,105,1800:0,105,255:40,0 chr1 36772022 . A . PASS END=36772025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 36772199 . A . PASS END=36772224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,543:0,45,255:17,0 chr1 36772225 . G . PASS END=36772225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,504:0,4,255:15,0 chr1 36772226 . C . PASS END=36772234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 36772235 . A . PASS END=36772236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 36772237 . G . PASS END=36772238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 36772239 . C . PASS END=36772239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:14,0 chr1 36772240 . G . PASS END=36772244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,675:0,41,255:18,0 chr1 36772245 . G . PASS END=36772245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 36772246 . A . LowGQ END=36772246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,567:12,0,255:17,0 chr1 36772247 . G . PASS END=36772249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,690:0,57,255:19,0 chr1 36772250 . T . PASS END=36772250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,621:0,26,255:17,0 chr1 36772251 . G . PASS END=36772251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 36772252 . G . PASS END=36772252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 36772253 . C . PASS END=36772259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 36772260 . G . PASS END=36772260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,627:0,5,255:18,0 chr1 36772261 . G . PASS END=36772267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 36772268 . T . PASS END=36772268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr1 36772269 . C . PASS END=36772272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,684:0,44,255:19,0 chr1 36772273 . C . PASS END=36772273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 36772274 . A . PASS END=36772274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 36772275 . G . PASS END=36772278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 36772279 . C . PASS END=36772279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 36772280 . G . PASS END=36772284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 36772285 . G . PASS END=36772285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 36772286 . T . PASS END=36772287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36772288 . C . PASS END=36772290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 36772291 . G . PASS END=36772291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 36772292 . C . PASS END=36772303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 36772304 . T . PASS END=36772306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 36772307 . G . PASS END=36772307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 36772308 . C . PASS END=36772310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 36772311 . A . PASS END=36772311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36772312 . G . PASS END=36772316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36772317 . T . PASS END=36772342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,623:0,43,255:19,0 chr1 36772343 . A . PASS END=36772343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 36772344 . G . PASS END=36772356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:18,0 chr1 36772443 . G . PASS END=36772463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,560:0,40,255:18,0 chr1 36772464 . G . PASS END=36772506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr1 36772768 . G . PASS END=36772881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1258:0,81,255:40,0 chr1 36772882 . A . PASS END=36772882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:49:38:0,49,994:0,49,255:28,0 chr1 36772883 . G . PASS END=36772884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1350:0,111,255:30,0 chr1 36772885 . A . PASS END=36772885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1081:0,57,255:26,0 chr1 36772886 . G . PASS END=36772886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 36773118 . A . PASS END=36773208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:36:0,85,1214:0,85,255:40,0 chr1 36773371 . G . PASS END=36773404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:17:0,43,586:0,43,255:19,0 chr1 36773405 . T G, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.154;ReadPosRankSum=1.380;FractionInformativeReads=0.947;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,13,0:0.722,0.000:18:3,8,0:2,5,0:34:85,0,31,457,179,636:255,0,115:5,0:5.0002e+01,1.6886e-03,3.4217e+01,4.5000e+02,2.1354e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,0,7,6:3,2,8,5 chr1 36773406 . G . PASS END=36773414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 36773415 . C . PASS END=36773419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 36773420 . T . PASS END=36773423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 36773424 . A . PASS END=36773424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36773425 . A . PASS END=36773426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 36773519 . C . PASS END=36773528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 36773529 . T . PASS END=36773545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 36773546 . C . PASS END=36773546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 36773547 . C . PASS END=36773547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 36773548 . A . PASS END=36773551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 36773552 . T . PASS END=36773564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 36773710 . T . PASS END=36773781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:89:48:0,89,1585:0,89,255:40,0 chr1 36773782 . G . PASS END=36773810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:50:0,101,1724:0,101,255:40,0 chr1 36773990 . A . PASS END=36773998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1000:0,68,255:26,0 chr1 36773999 . G . PASS END=36774003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36774004 . G . PASS END=36774004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 36774005 . G . PASS END=36774055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1048:0,82,255:35,0 chr1 36774056 . T . PASS END=36774056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1124:0,72,255:32,0 chr1 36774057 . T . PASS END=36774073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1190:0,86,255:34,0 chr1 36774074 . C . PASS END=36774076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 36775149 . A . PASS END=36775191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:46:0,92,1604:0,92,255:40,0 chr1 36784672 . C . PASS END=36784692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1001:0,81,255:29,0 chr1 36784693 . A . PASS END=36784693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 36784694 . G . PASS END=36784738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1080:0,84,255:34,0 chr1 36784739 . A . PASS END=36784739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:32,0 chr1 36784740 . G . PASS END=36784765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1151:0,91,255:36,0 chr1 36784861 . G . PASS END=36784910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:38:0,82,1426:0,82,255:40,0 chr1 36784911 . C . PASS END=36784911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:34,0 chr1 36784912 . A . PASS END=36784913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1122:0,88,255:34,0 chr1 36785043 . G . PASS END=36785098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1333:0,87,255:40,2 chr1 36785099 . A . PASS END=36785099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1459:0,57,255:39,2 chr1 36785100 . A . PASS END=36785129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,85,255:40,0 chr1 36785130 . C . PASS END=36785137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:70:29:0,70,972:0,70,255:26,0 chr1 36785276 . G . PASS END=36785309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 36785310 . C . PASS END=36785318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 36785319 . G . PASS END=36785319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:11,0 chr1 36785320 . A . PASS END=36785327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 36785328 . T . PASS END=36785328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 36785329 . G . PASS END=36785333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 36785334 . A . PASS END=36785360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,449:0,36,255:13,0 chr1 36785361 . C . PASS END=36785402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr1 36785403 . C . PASS END=36785415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 36785416 . C . PASS END=36785417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:18,0 chr1 36785418 . C . PASS END=36785434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:26,0 chr1 36785435 . A . PASS END=36785482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:27:0,81,1000:0,81,255:35,0 chr1 36785483 . A . PASS END=36785483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:29,0 chr1 36785484 . T . PASS END=36785505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1103:0,83,255:31,0 chr1 36785506 . C . PASS END=36785507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36785508 . C . PASS END=36785509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 36785510 . C . PASS END=36785511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 36785512 . A . PASS END=36785512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:24,0 chr1 36785513 . G . PASS END=36785520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr1 36785521 . G . PASS END=36785524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 36785525 . A . PASS END=36785525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 36785526 . C . PASS END=36785531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 36785532 . A . PASS END=36785532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:26,0 chr1 36785533 . G . PASS END=36785550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 36785551 . A . PASS END=36785551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 36785552 . G . PASS END=36785560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:30,0 chr1 36785561 . A . PASS END=36785561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 36785562 . T . PASS END=36785562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 36785563 . C . PASS END=36785563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 36785564 . A . PASS END=36785564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,1004:0,48,255:25,0 chr1 36785565 . T . PASS END=36785575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,1080:0,66,255:26,0 chr1 36785576 . A . PASS END=36785584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 36785585 . G . PASS END=36785592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr1 36785593 . A . PASS END=36785595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36785596 . C . PASS END=36785610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,62,255:26,0 chr1 36785611 . G . PASS END=36785615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr1 36785616 . T . PASS END=36785616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:18,0 chr1 36785617 . T . PASS END=36785629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 36785630 . T . PASS END=36785630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 36785631 . C . PASS END=36785653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,653:0,44,255:19,0 chr1 36785654 . A . PASS END=36785655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:18,0 chr1 36785656 . G . PASS END=36785656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 36785657 . G . PASS END=36785659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 36785660 . A . PASS END=36785660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 36785661 . A . PASS END=36785663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:21,0 chr1 36785664 . T . PASS END=36785664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr1 36785665 . C . PASS END=36785665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 36785666 . C . PASS END=36785666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 36785667 . C . PASS END=36785674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 36785675 . A . PASS END=36785678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36785679 . T . PASS END=36785679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:18,0 chr1 36785680 . G . PASS END=36785680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 36785681 . G . PASS END=36785697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,698:0,44,255:19,0 chr1 36785698 . G . PASS END=36785703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 36785704 . C . PASS END=36785705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 36785706 . C . PASS END=36785708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 36785709 . T . PASS END=36785710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 36785711 . G . PASS END=36785723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 36785724 . C . PASS END=36785724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr1 36785725 . C . PASS END=36785731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:23,0 chr1 36785732 . C . PASS END=36785732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 36785733 . T . PASS END=36785745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,823:0,69,255:23,0 chr1 36785746 . G . PASS END=36785747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 36785748 . T . PASS END=36785772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,748:0,66,255:23,0 chr1 36785773 . C . PASS END=36785773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 36785774 . C . PASS END=36785793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,925:0,69,255:25,0 chr1 36785794 . A . PASS END=36785794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 36785795 . G . PASS END=36785802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 36785803 . G . PASS END=36785803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 36785804 . A . PASS END=36785804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36785805 . A . PASS END=36785807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:56:22:0,56,851:0,56,255:20,0 chr1 36785808 . T . PASS END=36785822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 36785823 . C . PASS END=36785825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36785826 . A . PASS END=36785828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36785829 . A . PASS END=36785829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 36785830 . G . PASS END=36785836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 36785837 . T . PASS END=36785852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:19,0 chr1 36785853 . C . PASS END=36785853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,566:0,20,255:15,0 chr1 36785854 . C . PASS END=36785857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,690:0,54,255:18,0 chr1 36785858 . A . PASS END=36785858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 36785859 . C . PASS END=36785890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,706:0,54,255:19,0 chr1 36785891 . T . PASS END=36785896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 36785897 . A . PASS END=36785898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 36785899 . G . PASS END=36785952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,817:0,62,255:26,0 chr1 36785953 . G . PASS END=36785977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 36785978 . T . PASS END=36785978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 36785979 . C . PASS END=36786000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1033:0,87,255:31,0 chr1 36786001 . C . PASS END=36786001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 36786002 . C . PASS END=36786011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:33,0 chr1 36786012 . A . PASS END=36786012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:32,0 chr1 36786013 . A . PASS END=36786034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1117:0,82,255:33,0 chr1 36786035 . G . PASS END=36786035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr1 36786036 . A . PASS END=36786038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36786039 . C . PASS END=36786042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1055:0,74,255:26,0 chr1 36786043 . T . PASS END=36786043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36786044 . T . PASS END=36786044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 36786045 . C . PASS END=36786046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36786047 . A . PASS END=36786047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 36786048 . A . PASS END=36786048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36786049 . T . PASS END=36786067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,74,255:26,0 chr1 36786068 . G . PASS END=36786073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:27,0 chr1 36786074 . G . PASS END=36786091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,67,255:25,0 chr1 36786092 . A . PASS END=36786092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 36786093 . G . PASS END=36786095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:24,0 chr1 36786096 . C . PASS END=36786096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36786097 . T . PASS END=36786097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36786098 . C . PASS END=36786098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36786099 . T . PASS END=36786110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,1039:0,74,255:26,0 chr1 36786111 . T . PASS END=36786127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 36786128 . G . PASS END=36786137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1016:0,71,255:26,0 chr1 36786138 . A . PASS END=36786138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36786139 . A . PASS END=36786139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 36786140 . G . PASS END=36786146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 36786147 . T . PASS END=36786147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36786148 . G . PASS END=36786150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36786151 . C . PASS END=36786151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 36786152 . C . PASS END=36786152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36786153 . T . PASS END=36786153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 36786154 . G . PASS END=36786155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36786156 . A . PASS END=36786166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,992:0,68,255:26,0 chr1 36786167 . C . PASS END=36786167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 36786168 . C . PASS END=36786182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr1 36786183 . T . PASS END=36786183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 36786184 . G . PASS END=36786201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr1 36786202 . G . PASS END=36786202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:23,0 chr1 36786203 . C . PASS END=36786220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 36786221 . T . PASS END=36786221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:23,0 chr1 36786222 . T . PASS END=36786318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,884:0,61,255:24,0 chr1 36786319 . T . PASS END=36786320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 36786321 . A . PASS END=36786323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 36786324 . G . PASS END=36786324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 36786325 . A . PASS END=36786325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,881:0,78,255:26,0 chr1 36786326 . G . PASS END=36786326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,778:0,45,255:24,0 chr1 36786327 . T . PASS END=36786338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,745:0,61,255:26,0 chr1 36786339 . C . PASS END=36786340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36786341 . C . PASS END=36786370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,992:0,68,255:26,0 chr1 36786371 . G . PASS END=36786371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 36786372 . C . PASS END=36786386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 36786387 . A . PASS END=36786387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 36786388 . G . PASS END=36786403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,66,255:23,0 chr1 36786516 . G . PASS END=36786579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1190:0,83,255:35,0 chr1 36786657 . G . PASS END=36786666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 36786667 . T . PASS END=36786667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:23,0 chr1 36786668 . G . PASS END=36786688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:24:0,67,970:0,67,255:26,0 chr1 36786689 . G . PASS END=36786692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr1 36786693 . C . PASS END=36786716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 36786717 . C . PASS END=36786719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 36786720 . A . PASS END=36786742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:24,0 chr1 36786743 . A . PASS END=36786743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 36786744 . G . PASS END=36786746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 36786747 . A . PASS END=36786747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 36786748 . C . PASS END=36786756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,906:0,62,255:26,0 chr1 36786757 . G . PASS END=36786768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 36786769 . G . PASS END=36786785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,939:0,64,255:25,0 chr1 36786786 . A . PASS END=36786786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 36786787 . C . PASS END=36786809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,809:0,69,255:24,0 chr1 36786810 . A . PASS END=36786810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 36786811 . G . PASS END=36786811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 36786812 . T . PASS END=36786812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 36786813 . A . PASS END=36786814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 36787325 . T . PASS END=36787331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1404:0,87,255:40,0 chr1 36787332 . A . PASS END=36787379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:40:0,87,1269:0,87,255:40,0 chr1 36787896 . T . PASS END=36787898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 36787899 . G . PASS END=36787925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:16,0 chr1 36787926 . C . PASS END=36787931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:17,0 chr1 36787932 . C . PASS END=36787933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 36787934 . T . LowGQ END=36787934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:23,0,255:16,0 chr1 36787935 . G . PASS END=36787935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 36787936 . G . PASS END=36787946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,706:0,57,255:19,0 chr1 36787947 . C . PASS END=36787948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36787949 . G . PASS END=36787949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:20,0 chr1 36787950 . C . PASS END=36787953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36787954 . C . PASS END=36787954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 36787955 . C . PASS END=36787960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 36787961 . C . PASS END=36787961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 36787962 . C . PASS END=36787965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 36787966 . A . PASS END=36787968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 36787969 . T . PASS END=36787970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 36787971 . C . PASS END=36787971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:25,0 chr1 36787972 . G . PASS END=36787982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 36787983 . G . PASS END=36787989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36787990 . A . PASS END=36787993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36787994 . C . PASS END=36787997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36787998 . C . PASS END=36787999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36788000 . G . PASS END=36788011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 36788012 . G . PASS END=36788014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36788015 . C . PASS END=36788016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36788017 . T . PASS END=36788017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 36788018 . C . PASS END=36788024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 36788025 . C . PASS END=36788025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 36788026 . T . PASS END=36788054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1027:0,80,255:32,0 chr1 36788055 . G . PASS END=36788055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:30,0 chr1 36788056 . A . PASS END=36788062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1103:0,82,255:29,0 chr1 36788063 . T . PASS END=36788064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 36788065 . A . PASS END=36788081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1164:0,80,255:32,0 chr1 36788082 . C . PASS END=36788082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr1 36788083 . G . PASS END=36788202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:32:0,87,1188:0,89,255:40,0 chr1 36788203 . T . PASS END=36788203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,997:0,36,255:29,0 chr1 36788204 . G . PASS END=36788204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:28,0 chr1 36788205 . A . PASS END=36788207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,91,255:29,0 chr1 36788208 . C . PASS END=36788214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,85,255:26,0 chr1 36788215 . C . PASS END=36788215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 36788216 . G . PASS END=36788216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1123:0,44,255:27,0 chr1 36788217 . G . PASS END=36788217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:26,0 chr1 36788218 . G . PASS END=36788218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 36788219 . G . PASS END=36788221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:48:29:0,48,986:0,48,255:27,0 chr1 36788222 . G . PASS END=36788222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36788223 . C . PASS END=36788223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 36788224 . G . PASS END=36788224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36788225 . G . PASS END=36788225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 36788226 . G . PASS END=36788226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36788227 . C . PASS END=36788227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:26,0 chr1 36788228 . G . PASS END=36788229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36788230 . G . PASS END=36788257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr1 36788258 . G . PASS END=36788260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36788261 . A . PASS END=36788267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 36788268 . G . PASS END=36788269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36788270 . G . PASS END=36788270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:27,0 chr1 36788271 . C . PASS END=36788279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 36788280 . G . PASS END=36788280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 36788281 . A . PASS END=36788285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 36788286 . G . PASS END=36788286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 36788287 . A . PASS END=36788293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 36788294 . G . PASS END=36788294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 36788295 . C . PASS END=36788304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36788305 . A . PASS END=36788305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:26,0 chr1 36788306 . G . PASS END=36788308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 36788309 . C . PASS END=36788309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 36788310 . G . PASS END=36788314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 36788315 . T . PASS END=36788318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,968:0,70,255:26,0 chr1 36788319 . G . PASS END=36788326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:25,0 chr1 36788572 . C . PASS END=36788576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 36788577 . A . PASS END=36788577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 36788578 . T . PASS END=36788583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:24:0,64,864:0,64,255:26,0 chr1 36788584 . C . PASS END=36788584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 36788585 . G . PASS END=36788589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 36788590 . C . PASS END=36788596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 36788597 . G . PASS END=36788597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 36788598 . C . PASS END=36788601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 36788602 . T . PASS END=36788602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1062:0,60,255:28,0 chr1 36788603 . G . PASS END=36788603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 36788604 . C . PASS END=36788604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 36788605 . T . PASS END=36788609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 36788610 . A . PASS END=36788633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 36788634 . T . PASS END=36788634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 36788635 . C . PASS END=36788638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 36793321 . G . PASS END=36793326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 36793327 . G . PASS END=36793327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 36793328 . C . PASS END=36793330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36793331 . T . PASS END=36793331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 36793332 . G . PASS END=36793332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 36793333 . G . PASS END=36793334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 36793335 . C . PASS END=36793356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,963:0,72,255:26,0 chr1 36793357 . G . PASS END=36793407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1133:0,84,255:37,0 chr1 36793408 . G . PASS END=36793408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr1 36793409 . G . PASS END=36793433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,95,255:37,0 chr1 36793434 . A . PASS END=36793434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 36793435 . A . PASS END=36793441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,89,255:29,0 chr1 36793442 . T . PASS END=36793470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 36793471 . C . PASS END=36793481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr1 36807356 . T . PASS END=36807365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 36807366 . A . PASS END=36807399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 36807400 . A . PASS END=36807411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,504:0,39,255:13,0 chr1 36807412 . G . PASS END=36807418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 36807419 . G . PASS END=36807420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36807421 . G . PASS END=36807435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 36807436 . C . PASS END=36807443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 36807444 . G . PASS END=36807444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36807445 . C . PASS END=36807459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36807460 . G . PASS END=36807465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 36807466 . G . PASS END=36807469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36807470 . C . PASS END=36807480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 36807481 . C T, 45.96 PASS DP=13;MQ=250.00;MQRankSum=2.700;ReadPosRankSum=1.466;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,4,0:0.308,0.000:13:4,2,0:5,2,0:45:81,0,50,135,292,427:108,0,255:8,0:4.5961e+01,1.3176e-04,5.3000e+01,1.3505e+02,3.2665e+02,4.2990e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,1,3:3,6,3,1 chr1 36807482 . G . PASS END=36807487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 36807488 . G . PASS END=36807488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 36807489 . A . PASS END=36807508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 36807509 . C . PASS END=36807518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 36807519 . T . PASS END=36807534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr1 36807535 . T . PASS END=36807535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 36807536 . C . PASS END=36807539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 36807540 . A . LowGQ END=36807540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr1 36807541 . A . PASS END=36807548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 36807549 . T . LowGQ END=36807549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:8,0 chr1 36807550 . G . PASS END=36807559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 36807560 . C . PASS END=36807561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 36807562 . C . PASS END=36807566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 36807567 . A . PASS END=36807571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 36807572 . C . PASS END=36807574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 36808800 . T . PASS END=36808803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 36808804 . G . PASS END=36808808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 36808809 . G . PASS END=36808809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 36808810 . G . PASS END=36808826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,560:0,45,255:19,0 chr1 36808827 . C . PASS END=36808827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 36808828 . C . PASS END=36808830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 36808831 . C . PASS END=36808854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:24,0 chr1 36808855 . A . PASS END=36808855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr1 36808856 . G . PASS END=36808862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,941:0,69,255:26,0 chr1 36808863 . C . PASS END=36808917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,994:0,80,255:35,0 chr1 36808918 . C . PASS END=36808918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr1 36808919 . T . PASS END=36809019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1156:0,83,255:35,0 chr1 36809020 . A . PASS END=36809020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 36809021 . A . PASS END=36809025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36809026 . C . PASS END=36809045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 36809046 . C . PASS END=36809049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 36809461 . C . PASS END=36809484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,427:0,33,255:13,0 chr1 36809485 . G . PASS END=36809496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 36809497 . T . PASS END=36809497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 36809498 . C . PASS END=36809513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 36809514 . C . PASS END=36809515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 36809516 . G . PASS END=36809519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 36809520 . G . PASS END=36809536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 36809537 . G . PASS END=36809545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 36809546 . T . PASS END=36809546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 36809547 . G . PASS END=36809580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,491:0,45,255:17,0 chr1 36809721 . T . LowGQ END=36809721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,832:6,0,255:25,0 chr1 36809722 . C . PASS END=36809723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,956:0,60,255:29,0 chr1 36809724 . G . PASS END=36809724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:22:35:0,22,1036:0,22,255:30,0 chr1 36809725 . G . PASS END=36809725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 36809726 . A . PASS END=36809727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:71:35:0,71,1060:0,71,255:33,0 chr1 36809728 . T . PASS END=36809728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1133:0,36,255:32,0 chr1 36809729 . G . PASS END=36809729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1219:0,81,255:34,0 chr1 36809730 . G . PASS END=36809730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1183:0,66,255:34,0 chr1 36809731 . T . PASS END=36809734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1342:0,100,255:36,0 chr1 36809735 . C . PASS END=36809735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:15:39:0,15,1216:0,15,255:33,0 chr1 36809736 . T . PASS END=36809736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1258:0,84,255:35,0 chr1 36809737 . C . PASS END=36809737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1288:0,40,255:35,0 chr1 36809738 . G . PASS END=36809738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1304:0,67,255:35,0 chr1 36809739 . G . PASS END=36809739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 36809740 . C . PASS END=36809740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:35,0 chr1 36809741 . A . PASS END=36809747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1328:0,84,255:37,0 chr1 36809748 . A . PASS END=36809748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1381:0,73,255:37,0 chr1 36809749 . T . PASS END=36809752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:40:0,87,1316:0,87,255:39,0 chr1 36809753 . G . PASS END=36809753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:45:41:0,45,1349:0,45,255:38,0 chr1 36809754 . C . PASS END=36809754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1459:0,84,255:38,0 chr1 36809755 . G . PASS END=36809758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:40:0,90,1418:0,90,255:39,0 chr1 36809759 . G . PASS END=36809759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:38,0 chr1 36809760 . A . PASS END=36809760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 36809761 . G . PASS END=36809761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:39,0 chr1 36809762 . C . PASS END=36809765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1457:0,93,255:40,0 chr1 36809766 . T . PASS END=36809766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1467:0,74,255:40,0 chr1 36809767 . G . PASS END=36809847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,1155:0,80,255:40,0 chr1 36809848 . T . PASS END=36809861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,819:0,61,255:26,0 chr1 36809862 . C . PASS END=36809862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 36809863 . G . PASS END=36809865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 36814301 . C . PASS END=36814307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 36814308 . C . PASS END=36814308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr1 36814309 . A . PASS END=36814310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 36814311 . G . PASS END=36814317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 36814318 . C . PASS END=36814330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 36814331 . G . PASS END=36814331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 36814332 . G . PASS END=36814335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 36814336 . C . PASS END=36814336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr1 36814337 . C . PASS END=36814358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,886:0,64,255:26,0 chr1 36814359 . C . PASS END=36814365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 36814366 . C . PASS END=36814416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,794:0,62,255:26,0 chr1 36819965 . C . PASS END=36820017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,230,255:40,0 chr1 36820807 . C . PASS END=36820809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:18,0 chr1 36820810 . G . PASS END=36820811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,860:0,69,255:23,0 chr1 36820812 . G . PASS END=36820812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 36820813 . C . PASS END=36820825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:26,0 chr1 36820826 . A . PASS END=36820833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 36820834 . C . PASS END=36820834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 36820835 . A . PASS END=36820839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 36820840 . G . PASS END=36820845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36820846 . G . PASS END=36820874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1133:0,80,255:34,0 chr1 36820875 . T . PASS END=36820875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:29,0 chr1 36820876 . C . PASS END=36820969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:33:0,83,1202:0,83,255:40,0 chr1 36820970 . C . PASS END=36820970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1106:0,72,255:34,0 chr1 36820971 . G . PASS END=36821002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1381:0,106,255:40,0 chr1 36821003 . T . PASS END=36821003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr1 36821004 . C . PASS END=36821027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1225:0,86,255:34,0 chr1 36821028 . T . PASS END=36821034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:26,0 chr1 36823840 . C . PASS END=36823851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:19,0 chr1 36823852 . G . PASS END=36823862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:26,0 chr1 36823863 . C . PASS END=36823863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 36823864 . C . PASS END=36823865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:68:28:0,68,1000:0,68,255:30,0 chr1 36823866 . C . PASS END=36823972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1202:0,93,255:40,0 chr1 36823973 . A . PASS END=36823973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:28,0 chr1 36823974 . G . PASS END=36823977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 36823978 . C . PASS END=36823983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:25,0 chr1 36824338 . C . PASS END=36824432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,90,255:40,0 chr1 36824433 . A . PASS END=36824438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:30:0,75,1125:0,83,255:26,0 chr1 36826822 . C . PASS END=36826927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,99,1485:0,117,255:40,0 chr1 36826928 . C . PASS END=36826928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1296:0,70,255:31,0 chr1 36826929 . T . PASS END=36826933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:38:0,96,1440:0,101,255:32,0 chr1 36859359 . T . PASS END=36859362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 36859363 . T . PASS END=36859363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 36859364 . T . PASS END=36859366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:23,0 chr1 36859367 . A . PASS END=36859367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:22,0 chr1 36859368 . G . PASS END=36859368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 36859369 . T . PASS END=36859369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:21,0 chr1 36859370 . T . PASS END=36859397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:23:0,64,847:0,64,255:26,0 chr1 36859398 . G . PASS END=36859423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,1041:0,80,255:30,1 chr1 36859424 . G . PASS END=36859424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:45:32:0,45,1082:0,45,255:28,1 chr1 36859425 . A . PASS END=36859425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1058:0,65,255:30,0 chr1 36859426 . T . PASS END=36859429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1140:0,83,255:32,0 chr1 36859430 . T . PASS END=36859431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 36859432 . A . PASS END=36859449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1181:0,88,255:36,0 chr1 36859450 . A . PASS END=36859450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:29,0 chr1 36859451 . T . PASS END=36859456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,94,255:32,0 chr1 36859457 . A . PASS END=36859457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:30,0 chr1 36859458 . G . PASS END=36859496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1197:0,83,255:35,0 chr1 36859497 . A . PASS END=36859497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr1 36859498 . T . PASS END=36859505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1241:0,86,255:34,0 chr1 36859506 . T . PASS END=36859506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1156:0,71,255:31,0 chr1 36859507 . G . PASS END=36859536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1153:0,80,255:33,0 chr1 36859537 . T . PASS END=36859539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 36859540 . C . PASS END=36859544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,86,255:27,0 chr1 36859545 . A . PASS END=36859551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,972:0,63,255:26,0 chr1 36859552 . G . PASS END=36859552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:22,0 chr1 36859553 . T . PASS END=36859566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,892:0,72,255:24,0 chr1 36859567 . G . PASS END=36859567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 36859568 . C . PASS END=36859576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 36859577 . T . PASS END=36859577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr1 36859578 . G . PASS END=36859578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 36859579 . T . PASS END=36859579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:19,0 chr1 36859580 . T . PASS END=36859590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 36859591 . T . PASS END=36859592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,817:0,56,255:23,0 chr1 36859593 . G . PASS END=36859594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 36859595 . C . PASS END=36859595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr1 36859596 . A . PASS END=36859601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 36859602 . T . PASS END=36859602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr1 36859603 . A . PASS END=36859612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 36859613 . G . PASS END=36859617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 36859618 . A . PASS END=36859618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr1 36859619 . C . PASS END=36859645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,720:0,44,255:19,0 chr1 36859646 . T . PASS END=36859646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,718:0,33,255:17,0 chr1 36859647 . T . PASS END=36859647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 36859648 . A . PASS END=36859649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 36859650 . C . PASS END=36859650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 36859651 . C . PASS END=36859651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36859652 . G . PASS END=36859652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr1 36859653 . G . PASS END=36859672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 36859673 . G . PASS END=36859673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 36859674 . G . PASS END=36859686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 36859687 . T . PASS END=36859687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 36859688 . T . PASS END=36859700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 36859701 . C . PASS END=36859714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 36859715 . A . PASS END=36859716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,619:0,37,255:17,0 chr1 36859717 . T . PASS END=36859720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 36859721 . T . PASS END=36859721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 36859722 . C . PASS END=36859724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 36859725 . C . PASS END=36859725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 36859726 . G . PASS END=36859730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 36881649 . T . PASS END=36881667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 36881668 . T . PASS END=36881668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,862:0,29,255:21,0 chr1 36881669 . G . PASS END=36881690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,953:0,72,255:25,0 chr1 36881691 . A . PASS END=36881691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 36881692 . A . PASS END=36881696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr1 36883740 . C . PASS END=36883775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1319:0,95,255:40,0 chr1 36883776 . T . PASS END=36883776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1360:0,76,255:37,0 chr1 36883777 . T . PASS END=36883856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:38:0,90,1350:0,107,255:40,0 chr1 36884592 . C . PASS END=36884655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,109,1770:0,109,255:40,0 chr1 36886077 . T . PASS END=36886203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1139:0,90,255:40,0 chr1 36886204 . G . PASS END=36886216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,77,255:26,0 chr1 36887751 . C . PASS END=36887820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,162,255:40,0 chr1 36888369 . A . PASS END=36888378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1249:0,89,255:37,0 chr1 36888379 . C . PASS END=36888379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:35,0 chr1 36888380 . C . PASS END=36888497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:37:0,95,1335:0,95,255:40,0 chr1 36888538 . T . PASS END=36888571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,167,255:40,0 chr1 36888964 . C . PASS END=36888965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 36888966 . G . PASS END=36888982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,754:0,66,255:25,0 chr1 36888983 . C . PASS END=36888985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 36888986 . T . PASS END=36888990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 36888991 . C . PASS END=36888991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 36888992 . A . PASS END=36888995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:68:24:0,68,884:0,68,255:32,0 chr1 36888996 . A . PASS END=36889067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1055:0,80,255:37,0 chr1 36893921 . T . PASS END=36893925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:34,0 chr1 36893926 . T . PASS END=36893926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 36893927 . T . PASS END=36894071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1215:0,91,255:40,2 chr1 36894072 . T . PASS END=36894072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:26,0 chr1 36894073 . C . PASS END=36894074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 36894075 . C . PASS END=36894076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 36897403 . T . PASS END=36897424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1258:0,92,255:38,0 chr1 36897425 . A . PASS END=36897425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1311:0,65,255:36,0 chr1 36897426 . A . PASS END=36897472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1142:0,87,255:39,0 chr1 36897473 . C . PASS END=36897483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,80,255:26,0 chr1 36898023 . T . PASS END=36898160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:31:0,90,1350:0,93,255:40,0 chr1 36898161 . T . PASS END=36898161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 36898162 . T . PASS END=36898171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 36898172 . T . PASS END=36898173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 36898174 . G . PASS END=36898178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,89,255:29,0 chr1 36898179 . C . PASS END=36898190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:23,0 chr1 36904357 . C . PASS END=36904357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 36904358 . T . PASS END=36904511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1007:0,81,255:40,0 chr1 36909605 . C . PASS END=36909634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,151,255:40,0 chr1 36913414 . C . PASS END=36913441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,129,255:40,0 chr1 36913478 . T . PASS END=36913488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 36915859 . C . PASS END=36915860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,374:0,36,255:12,0 chr1 36915861 . T . PASS END=36915861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 36915862 . T . PASS END=36915869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 36915870 . T . PASS END=36915870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 36915871 . T . PASS END=36915871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 36915872 . G . PASS END=36915872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 36915873 . T . PASS END=36915873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 36915874 . C . PASS END=36915882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 36915883 . T . PASS END=36915883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 36915884 . G . PASS END=36915884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 36915885 . T . PASS END=36915885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 36915886 . T . LowGQ END=36915886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,433:2,0,255:13,0 chr1 36915887 . C . PASS END=36915901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 36915902 . T . PASS END=36915910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 36915911 . G . PASS END=36915921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,629:0,48,255:18,0 chr1 36915922 . T . PASS END=36915922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 36915923 . C . PASS END=36915959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,564:0,48,255:18,0 chr1 36915960 . C . PASS END=36915965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,512:0,31,255:13,0 chr1 36915966 . G . PASS END=36915966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:11,0 chr1 36915967 . A . PASS END=36915968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 36915969 . A . PASS END=36915969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 36915970 . T . PASS END=36915970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 36921389 . T . PASS END=36921396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:21,0 chr1 36921397 . T . PASS END=36921397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 36921398 . G . PASS END=36921400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr1 36921401 . T . PASS END=36921401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 36921402 . T . PASS END=36921409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 36921410 . C . PASS END=36921417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:30,0 chr1 36921418 . T . PASS END=36921418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 36921419 . G . PASS END=36921502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1127:0,82,255:40,0 chr1 36921503 . C . PASS END=36921505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36921506 . C . PASS END=36921507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 36921508 . T . PASS END=36921508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:26,0 chr1 36921509 . T . PASS END=36921515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,948:0,81,255:27,0 chr1 36921516 . T . PASS END=36921526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 36921788 . C . PASS END=36921979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:28:0,80,1062:0,80,255:40,0 chr1 36923524 . C . PASS END=36923531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,218,255:40,0 chr1 36923532 . G . PASS END=36923582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:78:0,120,1800:0,203,255:40,0 chr1 36926293 . T . PASS END=36926377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,144,255:40,0 chr1 36926865 . C . PASS END=36926913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1325:0,95,255:39,0 chr1 36927689 . T . PASS END=36927695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,176,255:40,0 chr1 36927696 . T . PASS END=36927732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,179,255:40,0 chr1 36927733 . G A, 49.69 PASS DP=71;MQ=249.15;MQRankSum=7.177;ReadPosRankSum=5.659;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,33,0:0.471,0.000:70:23,15,0:14,18,0:48:84,0,50,1123,1312,2435:255,0,255:29,0:4.9687e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,24,10,23:21,16,12,21 chr1 36927734 . G . PASS END=36927764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:39:0,90,1350:0,117,255:40,0 chr1 36929407 . C . PASS END=36929451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,102,1530:0,110,255:40,0 chr1 36929747 . T . PASS END=36929747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:20,0 chr1 36929748 . T . PASS END=36929749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 36929750 . G . PASS END=36929750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 36929751 . A . PASS END=36929752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 36929753 . G . PASS END=36929753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 36929754 . C . PASS END=36929755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 36929756 . G . PASS END=36929756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 36929757 . C . PASS END=36929759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 36929760 . G . PASS END=36929760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 36929761 . C . PASS END=36929766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 36929767 . T . PASS END=36929767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr1 36929768 . G . PASS END=36929782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr1 36929783 . T . PASS END=36929783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 36929784 . G . PASS END=36929786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 36929787 . G . PASS END=36929787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 36929788 . C . PASS END=36929788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 36929789 . T . PASS END=36929789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 36929790 . C . PASS END=36929793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 36929794 . C . PASS END=36929804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 36929805 . C . PASS END=36929826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 36929827 . A . PASS END=36929827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 36929828 . C . PASS END=36929839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:20,0 chr1 36929840 . G . PASS END=36929840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 36929841 . A . PASS END=36929844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 36929845 . A . PASS END=36929845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 36929846 . A . PASS END=36929857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 36929858 . T . PASS END=36929862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36929863 . G . PASS END=36929863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr1 36929864 . C . PASS END=36929876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:19,0 chr1 36931697 . T . PASS END=36931697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 36931698 . T . PASS END=36931704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:29,0 chr1 36931705 . C . PASS END=36931705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 36931706 . T . PASS END=36931769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:29:0,82,1057:0,82,255:38,0 chr1 36931770 . T . PASS END=36931770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:32,0 chr1 36931771 . T . PASS END=36931775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1205:0,91,255:33,0 chr1 36931776 . T . PASS END=36931776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1017:0,52,255:27,0 chr1 36931777 . A . PASS END=36931784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1157:0,82,255:30,0 chr1 36931785 . C . PASS END=36931796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1024:0,71,255:25,0 chr1 36931797 . C . PASS END=36931797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:23,0 chr1 36931798 . C . PASS END=36931801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 36931958 . C . PASS END=36931959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 36931960 . A . PASS END=36931960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 36931961 . G . PASS END=36931961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 36931962 . A . PASS END=36931963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 36931964 . G . PASS END=36931974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 36931975 . C . PASS END=36931983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 36931984 . C . PASS END=36931984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 36931985 . A . PASS END=36931985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 36931986 . T . PASS END=36931986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:15,0 chr1 36931987 . G . PASS END=36932000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,635:0,51,255:17,0 chr1 36932001 . T . PASS END=36932001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 36932002 . G . PASS END=36932014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,607:0,41,255:19,0 chr1 36932015 . G . PASS END=36932018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 36932019 . A . PASS END=36932020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,743:0,47,255:20,0 chr1 36932021 . C . PASS END=36932021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36932022 . A . PASS END=36932022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 36932023 . G . PASS END=36932028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 36932029 . C . PASS END=36932029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 36932030 . A . PASS END=36932034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 36932035 . C . PASS END=36932035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 36932036 . A . PASS END=36932038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 36932039 . G . PASS END=36932048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,884:0,69,255:23,0 chr1 36932049 . T . PASS END=36932049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 36932050 . G . PASS END=36932062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:23:0,68,831:0,68,255:27,0 chr1 36932063 . G . PASS END=36932066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 36932067 . A . PASS END=36932067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 36932068 . C . PASS END=36932068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36932069 . C . PASS END=36932074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 36932075 . C . PASS END=36932079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 36932080 . A . PASS END=36932080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 36932081 . G . PASS END=36932084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 36932085 . C . PASS END=36932091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 36932092 . G . PASS END=36932092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:23,0 chr1 36932093 . G . PASS END=36932107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 36932108 . A . PASS END=36932108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 36932109 . T . PASS END=36932109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 36932110 . A . PASS END=36932110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 36932111 . G . PASS END=36932111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 36932112 . G . PASS END=36932112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 36932113 . A . PASS END=36932132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,894:0,72,255:25,0 chr1 36932133 . C . PASS END=36932133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 36932134 . C . PASS END=36932148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,921:0,65,255:24,0 chr1 36932149 . G . PASS END=36932149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:23,0 chr1 36932150 . A . PASS END=36932197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,800:0,66,255:26,0 chr1 36932198 . G . PASS END=36932198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 36932199 . C . PASS END=36932213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 36932214 . T . PASS END=36932214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 36932215 . A . PASS END=36932217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36932218 . G . PASS END=36932218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 36932219 . G . PASS END=36932220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36932221 . C . PASS END=36932221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 36932222 . C . PASS END=36932222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 36932223 . T . PASS END=36932223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 36932224 . G . PASS END=36932228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 36932229 . C . PASS END=36932229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 36932230 . T . PASS END=36932238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 36932239 . A . PASS END=36932239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 36932240 . C . PASS END=36932245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 36932246 . T . PASS END=36932246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 36932247 . T . PASS END=36932263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,817:0,66,255:24,0 chr1 36932264 . T . PASS END=36932264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 36932265 . G . PASS END=36932300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,909:0,75,255:25,0 chr1 36932301 . A . PASS END=36932301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 36932302 . G . PASS END=36932327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 36932328 . C . PASS END=36932328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 36932329 . T . PASS END=36932329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 36932330 . G . PASS END=36932428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1169:0,80,255:37,0 chr1 36932429 . C . PASS END=36932429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1319:0,70,255:35,0 chr1 36932430 . T . PASS END=36932461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:36:0,86,1208:0,86,255:38,0 chr1 36932462 . C . PASS END=36932462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:33,0 chr1 36932463 . A . PASS END=36932470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:36:0,80,1242:0,80,255:36,0 chr1 36932471 . T . PASS END=36932471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:29,0 chr1 36932472 . G . PASS END=36932481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,91,255:31,0 chr1 36932482 . G . PASS END=36932482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 36932483 . C . PASS END=36932484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 36932485 . A . PASS END=36932487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 36932488 . G . PASS END=36932489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 36932490 . C . PASS END=36932509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,908:0,68,255:26,0 chr1 36932831 . C . PASS END=36932837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:23,0 chr1 36932838 . A . PASS END=36932839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 36932840 . G . PASS END=36932841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 36932842 . T . PASS END=36932842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 36932843 . T . PASS END=36932845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 36932846 . G . PASS END=36932846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:24,0 chr1 36932847 . G . PASS END=36932855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 36932856 . G . PASS END=36932859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36932860 . C . PASS END=36932863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 36932864 . G . PASS END=36932868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36932869 . T . PASS END=36932869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 36932870 . G . PASS END=36932870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36932871 . T . PASS END=36932871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 36932872 . G . PASS END=36932873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 36932874 . G . PASS END=36932874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 36932875 . C . PASS END=36932875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36932876 . T . PASS END=36932876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 36932877 . G . PASS END=36932877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:22,0 chr1 36932878 . G . PASS END=36932912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:24,0 chr1 36933159 . T . PASS END=36933219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1058:0,83,255:34,0 chr1 36933220 . A . PASS END=36933220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr1 36933221 . C . PASS END=36933227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 36933228 . A . PASS END=36933228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:27,0 chr1 36933229 . G . PASS END=36933233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 36933234 . A . PASS END=36933247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,76,255:26,0 chr1 36933248 . C . PASS END=36933252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:24:0,48,720:0,72,255:16,0 chr1 36933411 . G . PASS END=36933411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 36933416 . C . PASS END=36933416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 36933423 . C . PASS END=36933429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 36933430 . C . PASS END=36933430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 36933431 . A . PASS END=36933436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 36933437 . A . PASS END=36933437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 36933438 . T . PASS END=36933441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:17,0 chr1 36933442 . G . PASS END=36933451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr1 36933452 . G . PASS END=36933452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 36933453 . T . PASS END=36933454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 36933455 . C . PASS END=36933464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr1 36933465 . C . PASS END=36933465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 36933466 . C . PASS END=36933469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 36933470 . G . PASS END=36933470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 36933471 . C . PASS END=36933480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1133:0,90,255:30,0 chr1 36933481 . A . PASS END=36933481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 36933482 . G . PASS END=36933485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:30,0 chr1 36933486 . T . PASS END=36933486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 36933487 . G . PASS END=36933487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 36933488 . A . PASS END=36933488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 36933489 . G . PASS END=36933493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 36933494 . A . PASS END=36933494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 36933495 . T . PASS END=36933501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1164:0,83,255:32,0 chr1 36933502 . C . PASS END=36933502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:31,0 chr1 36933503 . A . PASS END=36933543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1109:0,90,255:32,0 chr1 36933544 . G . PASS END=36933563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:25,0 chr1 36933676 . A . PASS END=36933676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 36933677 . G . PASS END=36933678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 36933679 . A . PASS END=36933679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 36933680 . G . PASS END=36933683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:24,0 chr1 36933684 . T . PASS END=36933684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 36933685 . G . PASS END=36933686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 36933687 . T . PASS END=36933687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,827:0,42,255:23,0 chr1 36933688 . T . PASS END=36933745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,850:0,75,255:26,0 chr1 36933746 . G . PASS END=36933753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 36933754 . G . PASS END=36933754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 36933755 . C . PASS END=36933755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 36933756 . A . PASS END=36933796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 36933797 . A . PASS END=36933797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 36933798 . T . PASS END=36933799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 36933800 . C . PASS END=36933801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 36933802 . G . PASS END=36933806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36933807 . G . PASS END=36933816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 36933817 . A . PASS END=36933822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:18:0,39,585:0,54,255:13,0 chr1 36934756 . C . PASS END=36934767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,90,255:33,0 chr1 36934768 . G . PASS END=36934804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:35:0,99,1530:0,99,255:40,1 chr1 36934805 . C G, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.923;ReadPosRankSum=4.045;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,25,0:0.521,0.000:48:10,14,0:13,11,0:48:85,0,50,894,822,1716:255,0,255:22,0:5.0000e+01,6.6010e-05,5.2848e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,16,9:15,8,9,16 chr1 36934806 . C . PASS END=36934842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,128,255:40,0 chr1 36934843 . A . PASS END=36934858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1395:0,104,255:40,0 chr1 36935253 . C . PASS END=36935258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 36935259 . G . PASS END=36935262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 36935263 . A . PASS END=36935275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,670:0,57,255:19,0 chr1 36935276 . C . PASS END=36935281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 36935282 . T . PASS END=36935282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 36935283 . T . PASS END=36935294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,760:0,63,255:24,0 chr1 36935295 . T . PASS END=36935295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:23,0 chr1 36935296 . C . PASS END=36935296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 36935297 . C . PASS END=36935297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 36935298 . A . PASS END=36935298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 36935299 . G . PASS END=36935321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 36935322 . T . PASS END=36935327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:19,0 chr1 36935328 . G . PASS END=36935332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 36935333 . A . PASS END=36935333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 36935334 . G . PASS END=36935345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 36935346 . T . PASS END=36935347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 36935348 . A . PASS END=36935350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 36935351 . T . PASS END=36935390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,50,255:19,0 chr1 36935391 . A . PASS END=36935391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 36935392 . G . PASS END=36935400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 36935401 . A . PASS END=36935401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 36935402 . G . PASS END=36935404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 36935405 . T . PASS END=36935405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:13,0 chr1 36935406 . C . PASS END=36935413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 36935414 . A . PASS END=36935429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 36935430 . T . PASS END=36935430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 36935431 . C . PASS END=36935436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 36935437 . T . PASS END=36935437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 36935438 . G . PASS END=36935438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 36935439 . G . PASS END=36935441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,405:0,20,255:9,0 chr1 36935444 . G . PASS END=36935444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 36937034 . C . PASS END=36937057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,881:0,62,255:26,0 chr1 36937058 . G . PASS END=36937058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36937059 . A G, 491.32 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,29,0:1.000,0.000:29:0,13,0:0,16,0:442:529,444,0,629,629,629:255,87,0:0,0:4.5000e+02,4.4154e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,12:0,0,13,16:36937059 chr1 36937060 . G . PASS END=36937064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:31,0 chr1 36937065 . A G, 49.90 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=1.322;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:17,15,0:0.469,0.000:32:9,5,0:8,10,0:47:85,0,47,185,185,185:255,0,255:15,0:4.9899e+01,8.7754e-05,5.0000e+01,1.8467e+02,2.1944e+02,1.8768e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,5,7,8:8,9,5,10:36937059 chr1 36937066 . C . PASS END=36937069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 36937070 . A . PASS END=36937070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:30,0 chr1 36937071 . G . PASS END=36937105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:33:0,88,1213:0,88,255:40,0 chr1 36937106 . C . PASS END=36937186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:38:0,88,1410:0,88,255:40,0 chr1 36937187 . A . PASS END=36937187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:34,0 chr1 36937188 . G . PASS END=36937219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1197:0,90,255:37,0 chr1 36937220 . G . PASS END=36937242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 36937243 . A . PASS END=36937243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 36937244 . C . PASS END=36937247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 36937257 . A . PASS END=36937257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 36937667 . C . PASS END=36937667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 36937668 . T . PASS END=36937669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 36937670 . C . PASS END=36937675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 36937676 . C . PASS END=36937689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 36937690 . T . PASS END=36937692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36937693 . G . PASS END=36937693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 36937694 . G . PASS END=36937732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:30,0 chr1 36937733 . A . PASS END=36937733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 36937734 . G . PASS END=36937734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 36937735 . T . PASS END=36937735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 36937736 . G . PASS END=36937737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 36937738 . G . PASS END=36937739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36937740 . G . PASS END=36937740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 36937742 . T . PASS END=36937742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 36937839 . C . PASS END=36937888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1052:0,80,255:31,0 chr1 36937889 . C . PASS END=36937927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr1 36937928 . T . PASS END=36937972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,560:0,44,255:19,0 chr1 36937973 . T . PASS END=36937988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:12,0 chr1 36937989 . C . PASS END=36937989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:11,0 chr1 36937990 . C . PASS END=36937992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 36938118 . C . PASS END=36938126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 36938127 . G . PASS END=36938151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 36938152 . T . PASS END=36938161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,243:6,0 chr1 36938162 . C . PASS END=36938163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 36938164 . C . PASS END=36938199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 36938200 . T . LowGQ END=36938200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 36938201 . C . PASS END=36938206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 36938207 . A . LowGQ END=36938287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,22:0,0,33:3,0 chr1 36939036 . C . PASS END=36939039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,791:0,66,255:26,0 chr1 36939040 . A . PASS END=36939041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 36939042 . C . PASS END=36939043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 36939044 . A . PASS END=36939044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,86,255:28,0 chr1 36939045 . T . PASS END=36939047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 36939048 . G . PASS END=36939198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:30:0,80,1185:0,80,255:40,0 chr1 36939199 . T . PASS END=36939203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 36939204 . T . PASS END=36939206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36939207 . G . PASS END=36939223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 36939365 . T . PASS END=36939488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,102,1575:0,102,255:40,0 chr1 36940978 . A . PASS END=36941019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:24,0 chr1 36941020 . T . PASS END=36941021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 36941022 . C . PASS END=36941083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,777:0,61,255:26,0 chr1 36941084 . A . PASS END=36941084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:22,0 chr1 36941085 . G . PASS END=36941085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 36941086 . A . PASS END=36941086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 36941087 . T . PASS END=36941087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 36941088 . T . PASS END=36941096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 36941097 . C . PASS END=36941098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 36941099 . A . PASS END=36941109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 36941110 . G . PASS END=36941114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 36941115 . T . PASS END=36941115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 36941116 . G . PASS END=36941135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:30,0 chr1 36941136 . T . PASS END=36941136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1097:0,60,255:29,0 chr1 36941137 . C . PASS END=36941191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:30:0,80,1105:0,80,255:34,0 chr1 36941192 . C . PASS END=36941192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 36941193 . T . PASS END=36941196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,89,255:29,0 chr1 36941197 . T . PASS END=36941198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 36941199 . A . PASS END=36941208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 36941209 . C . PASS END=36941214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1061:0,71,255:26,0 chr1 36941215 . T . PASS END=36941218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 36941219 . A . PASS END=36941225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 36941226 . A . PASS END=36941226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:25,0 chr1 36941227 . G . PASS END=36941250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 36941251 . T . PASS END=36941251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 36941252 . G . PASS END=36941253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 36941254 . T . PASS END=36941261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:18,0 chr1 36941262 . C . PASS END=36941264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:30:22:0,30,450:0,50,255:10,0 chr1 36941265 . T . PASS END=36941274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:15:0,27,405:0,31,255:9,0 chr1 36945033 . C . PASS END=36945069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1038:0,82,255:34,0 chr1 36945070 . T . PASS END=36945070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:31,0 chr1 36945071 . C . PASS END=36945090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1188:0,96,255:32,0 chr1 36945091 . T . PASS END=36945091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 36945092 . T . PASS END=36945097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 37267452 . C . PASS END=37267462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 37267463 . C . PASS END=37267463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 37267464 . A . PASS END=37267464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 37267465 . G . PASS END=37267466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 37267467 . G . PASS END=37267471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 37267472 . A . PASS END=37267472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,990:0,68,255:27,0 chr1 37267473 . G . PASS END=37267481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:31,0 chr1 37267482 . G . PASS END=37267482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 37267483 . C . PASS END=37267646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:31:0,80,1105:0,80,255:40,0 chr1 37270534 . T . PASS END=37270625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,100,1491:0,100,255:40,0 chr1 37270626 . A . PASS END=37270626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:72:41:0,72,1108:0,72,255:37,0 chr1 37270627 . C . PASS END=37270720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1125:0,80,255:40,0 chr1 37270721 . T . PASS END=37270721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 37270722 . T . PASS END=37270733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 37270734 . C . PASS END=37270735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 37270736 . G . PASS END=37270754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 37270755 . A . PASS END=37270775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:23:0,61,876:0,61,255:26,0 chr1 37270776 . G . PASS END=37270783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,767:0,50,255:20,0 chr1 37270784 . T . PASS END=37270795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 37270796 . A . PASS END=37270803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 37270804 . G . PASS END=37270804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 37270805 . A . PASS END=37270817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 37270818 . T . PASS END=37270824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 37270825 . C . PASS END=37270838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 37271705 . C . PASS END=37271707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 37271708 . T . PASS END=37271708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 37271709 . G . PASS END=37271713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 37271714 . T . PASS END=37271714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 37271715 . G . PASS END=37271730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:23,0 chr1 37271731 . T . PASS END=37271732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 37271733 . G . PASS END=37271736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 37271737 . T . PASS END=37271737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 37271738 . C . PASS END=37271740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 37271741 . T . PASS END=37271741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 37271742 . G . PASS END=37271755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,858:0,61,255:26,0 chr1 37271756 . G . PASS END=37271759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 37271760 . G . PASS END=37271764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 37271765 . T . PASS END=37271766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 37271767 . C . PASS END=37271786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:26,0 chr1 37271787 . C . PASS END=37271788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 37271789 . C . PASS END=37271802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 37271803 . T . PASS END=37271803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:25,0 chr1 37271804 . C . PASS END=37271814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1000:0,70,255:26,0 chr1 37271815 . G . PASS END=37271816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:12:30:0,12,903:0,12,255:26,0 chr1 37271817 . G . PASS END=37271817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 37271818 . T . PASS END=37271818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,992:0,13,255:26,0 chr1 37271819 . A . LowGQ END=37271819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:0:30:0,0,953:4,0,255:25,0 chr1 37271820 . G . PASS END=37271820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1031:0,24,255:27,0 chr1 37271821 . T . PASS END=37271821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 37271822 . C . PASS END=37271823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 37271824 . G . PASS END=37271832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 37271833 . G . PASS END=37271837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 37271838 . C . PASS END=37271839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 37271840 . G . PASS END=37271840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 37271841 . G . PASS END=37271843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 37271844 . G . PASS END=37271846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 37271847 . C . PASS END=37271847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 37271848 . T . PASS END=37271848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 37271849 . C . PASS END=37271851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 37271852 . C . PASS END=37271852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 37271853 . G . PASS END=37271859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:29,0 chr1 37271860 . T . PASS END=37271875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,900:0,61,255:26,0 chr1 37271876 . G . PASS END=37271876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 37271877 . C . PASS END=37271877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:22,0 chr1 37271878 . T . PASS END=37271878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 37271879 . T . PASS END=37271879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 37271880 . G . PASS END=37271880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 37271881 . C . PASS END=37271881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 37271882 . T . PASS END=37271883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 37271884 . C . PASS END=37271884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 37271885 . T . PASS END=37271899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:25,0 chr1 37271900 . T . PASS END=37271900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 37271901 . C . PASS END=37271923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 37271924 . A . PASS END=37271924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 37271925 . T . PASS END=37271926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 37271927 . T . PASS END=37271927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:19,0 chr1 37282661 . C . PASS END=37282683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:34,0 chr1 37282684 . C . PASS END=37282684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 37282685 . A . PASS END=37282859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1225:0,80,255:40,0 chr1 37282860 . T . PASS END=37282860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 37282861 . T . PASS END=37282866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:30,0 chr1 37282867 . T . PASS END=37282878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,77,255:25,0 chr1 37285337 . C . PASS END=37285455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:89:35:0,89,1263:0,89,255:40,0 chr1 37291204 . C . PASS END=37291213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 37291214 . C . PASS END=37291214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 37291215 . G . PASS END=37291216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 37291217 . A . PASS END=37291233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1156:0,83,255:34,0 chr1 37291234 . C . PASS END=37291234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr1 37291235 . C . PASS END=37291404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,89,255:40,0 chr1 37291405 . G . PASS END=37291422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:24:0,61,825:0,61,255:25,0 chr1 37291423 . G . PASS END=37291427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:19,0 chr1 37307337 . G . PASS END=37307342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 37307343 . G . PASS END=37307343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 37307344 . A . PASS END=37307493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1125:0,82,255:40,0 chr1 37307494 . C . PASS END=37307497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 37307498 . A . PASS END=37307534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 37307535 . C . PASS END=37307540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,77,255:26,0 chr1 37315912 . C . PASS END=37315957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1139:0,90,255:38,0 chr1 37315958 . A . LowGQ END=37315958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,8:39:0:39:0,0,803:31,0,255:27,0 chr1 37315959 . C . PASS END=37315974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:36:0,83,1094:0,83,255:36,0 chr1 37315975 . T . PASS END=37315975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,955:0,71,255:32,0 chr1 37315976 . T . PASS END=37315977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 37315978 . G . PASS END=37315978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1000:0,71,255:32,0 chr1 37315979 . G . PASS END=37315984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,988:0,85,255:33,0 chr1 37315985 . T . PASS END=37315985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,928:0,30,255:25,0 chr1 37315986 . C . PASS END=37315991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:28,0 chr1 37315992 . T . PASS END=37315992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1084:0,41,255:26,0 chr1 37315993 . G . PASS END=37315995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 37315996 . G . PASS END=37315997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,936:0,76,255:27,0 chr1 37315998 . G . PASS END=37315998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 37315999 . C . PASS END=37316001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 37316002 . G . PASS END=37316002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,797:0,31,255:24,0 chr1 37316003 . T . PASS END=37316025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,893:0,64,255:25,0 chr1 37319216 . C . PASS END=37319323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:30:0,87,1103:0,89,255:40,0 chr1 37324709 . C . PASS END=37324709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 37324710 . T . PASS END=37324711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 37324712 . C . PASS END=37324720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:26,0 chr1 37324721 . G . PASS END=37324834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1047:0,84,255:40,0 chr1 37324835 . C . PASS END=37324852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:24:0,60,900:0,65,255:25,0 chr1 37325445 . C . PASS END=37325446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 37325447 . T . PASS END=37325460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:19,0 chr1 37325461 . A . PASS END=37325461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:18,0 chr1 37325462 . G . PASS END=37325464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 37325465 . G . PASS END=37325473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 37325474 . C . PASS END=37325474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 37325475 . G . PASS END=37325476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 37325477 . A C, 48.04 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=3.125;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,8,0:0.400,0.000:20:8,5,0:4,3,0:47:83,0,50,241,429,670:209,0,255:13,0:4.8036e+01,9.0084e-05,5.3000e+01,2.4132e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,5,3:9,3,4,4 chr1 37325478 . C . PASS END=37325483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 37325484 . A . PASS END=37325484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 37325485 . G . PASS END=37325486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 37325487 . T . PASS END=37325487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 37325488 . G . PASS END=37325490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 37325491 . T . PASS END=37325491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 37325492 . G . PASS END=37325497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:25,0 chr1 37325498 . G . PASS END=37325498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 37325499 . C . PASS END=37325500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1008:0,68,255:27,0 chr1 37325501 . C . PASS END=37325503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:32,0 chr1 37325504 . T . PASS END=37325505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1123:0,60,255:32,0 chr1 37325506 . G . PASS END=37325512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1255:0,89,255:36,0 chr1 37325513 . T . PASS END=37325513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1189:0,64,255:35,0 chr1 37325514 . C . PASS END=37325514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 37325515 . T . PASS END=37325523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1225:0,81,255:37,0 chr1 37325524 . G . PASS END=37325524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1280:0,67,255:34,0 chr1 37325525 . C . PASS END=37325529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1365:0,98,255:35,0 chr1 37325530 . A . PASS END=37325530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:34:38:0,34,1147:0,34,255:31,0 chr1 37325531 . C . PASS END=37325536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1347:0,84,255:36,0 chr1 37325537 . G . PASS END=37325537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 37325538 . G . PASS END=37325566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1114:0,88,255:35,0 chr1 37325567 . T . PASS END=37325567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:32,0 chr1 37325568 . C . PASS END=37325604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:33,0 chr1 37325605 . A . PASS END=37325609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,77,255:26,0 chr1 37325610 . G . PASS END=37325610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:23,0 chr1 37325611 . T . PASS END=37325615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 37325616 . A . PASS END=37325616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:23,0 chr1 37325617 . T . PASS END=37325618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr1 37335349 . C . PASS END=37335402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,109,1755:0,109,255:40,0 chr1 37337789 . C . PASS END=37337797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 37337798 . G . PASS END=37337798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 37337799 . A . PASS END=37337799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 37337800 . T . PASS END=37337800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 37337801 . C . PASS END=37337801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 37337802 . T . PASS END=37337811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:26,0 chr1 37337812 . T . PASS END=37337859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1024:0,81,255:31,0 chr1 37337860 . T . PASS END=37337860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:26,0 chr1 37337861 . C . PASS END=37337865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 37337866 . T . PASS END=37337866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 37337867 . G . PASS END=37337873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 37337874 . G . PASS END=37337874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 37337875 . G . PASS END=37337893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1103:0,90,255:30,0 chr1 37337894 . G . PASS END=37337894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 37337895 . A . PASS END=37337907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 37337908 . G . PASS END=37337908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 37337909 . G . PASS END=37337914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 37337915 . C . PASS END=37337941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,969:0,75,255:26,0 chr1 37337942 . C . PASS END=37337942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 37337943 . A . PASS END=37337944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 37337945 . G . PASS END=37337946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,831:0,44,255:22,0 chr1 37337947 . T . PASS END=37337947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 37337948 . G . PASS END=37337952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,823:0,58,255:20,0 chr1 37337953 . C . PASS END=37337957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 37337958 . A . PASS END=37337959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,786:0,55,255:20,0 chr1 37337960 . T . PASS END=37337963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 37337964 . A . PASS END=37337970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr1 37346235 . C . PASS END=37346236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 37346237 . G . PASS END=37346238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr1 37346239 . A . PASS END=37346239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 37346240 . C . PASS END=37346240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr1 37346241 . T . PASS END=37346241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 37346242 . G . PASS END=37346247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 37346248 . A . PASS END=37346249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 37346250 . A . LowGQ END=37346250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:5,0,255:11,0 chr1 37346251 . G . PASS END=37346258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 37346259 . T . PASS END=37346266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 37346267 . C . PASS END=37346267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 37346268 . G . PASS END=37346272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 37346273 . T . PASS END=37346273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,398:0,3,255:13,0 chr1 37346274 . T . PASS END=37346280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr1 37346281 . C . PASS END=37346281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 37346282 . T . PASS END=37346283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 37346284 . G . PASS END=37346285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 37346286 . C . PASS END=37346288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 37346289 . G . PASS END=37346289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:16,0 chr1 37346290 . G . PASS END=37346296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 37346297 . A . PASS END=37346297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:18,0 chr1 37346298 . T . PASS END=37346302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,674:0,54,255:19,0 chr1 37346303 . T . PASS END=37346312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 37346313 . A . PASS END=37346323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 37346324 . G . PASS END=37346332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 37346333 . T . PASS END=37346361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 37346362 . C . PASS END=37346362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:19,0 chr1 37346363 . G . PASS END=37346364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 37346365 . G . PASS END=37346365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 37346366 . T . PASS END=37346367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 37346368 . G . PASS END=37346391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,670:0,44,255:19,0 chr1 37346392 . G . PASS END=37346395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 37346396 . A . PASS END=37346396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 37346397 . C . PASS END=37346399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 37346400 . C . PASS END=37346449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 37346450 . G . PASS END=37346455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 37346456 . A . PASS END=37346461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 37346462 . G . PASS END=37346462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 37346463 . C . PASS END=37346467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 37346468 . A . PASS END=37346492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 37356521 . C . PASS END=37356523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:29,0 chr1 37356524 . T . PASS END=37356524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 37356525 . T . PASS END=37356528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 37356529 . G . PASS END=37356529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 37356530 . T . PASS END=37356697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:29:0,83,1160:0,83,255:40,0 chr1 37396339 . C T, 188.43 PASS DP=47;MQ=249.51;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,18,0:0,29,0:138:226,141,0,326,326,326:255,141,0:0,0:1.8843e+02,1.3843e+02,0.0000e+00,3.2320e+02,3.5797e+02,3.2622e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,21,26:0,0,20,27 chr1 37499595 . C . PASS END=37499608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 37499609 . T . PASS END=37499609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 37499610 . G . PASS END=37499614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 37499615 . A . PASS END=37499622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 37499623 . C . PASS END=37499623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 37499624 . G . PASS END=37499657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1088:0,84,255:31,0 chr1 37499658 . C . PASS END=37499658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 37499659 . G . PASS END=37499663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 37499664 . A . PASS END=37499664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 37499665 . G . PASS END=37499665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 37499666 . T . PASS END=37499666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 37499667 . A . PASS END=37499691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr1 37499692 . C . PASS END=37499702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 37499703 . C . PASS END=37499709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,66,255:19,0 chr1 37941098 . A . PASS END=37941105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr1 37941106 . C . PASS END=37941109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 37941110 . T . PASS END=37941110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 37941111 . G . PASS END=37941118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1024:0,90,255:30,0 chr1 37941119 . A . PASS END=37941119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,926:0,73,255:29,0 chr1 37941120 . A . PASS END=37941125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:31,0 chr1 37941126 . T . PASS END=37941126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 37941127 . C . PASS END=37941208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1188:0,86,255:35,0 chr1 37941209 . C . PASS END=37941209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 37941210 . T . PASS END=37941247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1213:0,86,255:34,0 chr1 37941248 . A . PASS END=37941248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:29,0 chr1 37941249 . A . PASS END=37941272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1175:0,89,255:34,0 chr1 37941273 . G . PASS END=37941273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:32,0 chr1 37941274 . C . PASS END=37941274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 37941275 . T . PASS END=37941275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:32,0 chr1 37941276 . A . PASS END=37941293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:34,0 chr1 37941294 . A . PASS END=37941298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:34:0,78,1170:0,89,255:26,0 chr1 37941299 . G . PASS END=37941305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:29,0 chr1 37941306 . A . PASS END=37941306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:28,0 chr1 37941307 . G . PASS END=37941336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1046:0,89,255:33,0 chr1 37941337 . G . PASS END=37941337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:26,0 chr1 37941338 . G . PASS END=37941355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:30,0 chr1 37941356 . A . PASS END=37941356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 37941357 . A . PASS END=37941374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1194:0,86,255:34,0 chr1 37941375 . A . PASS END=37941375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:28,0 chr1 37941376 . G . PASS END=37941412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:33,0 chr1 37941413 . C . PASS END=37941416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 37941417 . C . PASS END=37941417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr1 37941418 . T . PASS END=37941419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 37941420 . T . PASS END=37941423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 37941424 . C . PASS END=37941427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 37941428 . C . PASS END=37941430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 37941431 . G . PASS END=37941431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:25,0 chr1 37941432 . G . PASS END=37941455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,941:0,67,255:26,0 chr1 37941456 . A . PASS END=37941456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 37941457 . C . PASS END=37941465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 37941466 . T . PASS END=37941466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 37941467 . C . PASS END=37941490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:23,0 chr1 37941491 . G . PASS END=37941491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr1 37941492 . G . PASS END=37941499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr1 37941500 . C . PASS END=37941512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,682:0,44,255:19,0 chr1 37941513 . T . PASS END=37941515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 37941516 . T . PASS END=37941535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 37941536 . A . PASS END=37941540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,38,255:13,0 chr1 37945891 . C . PASS END=37945893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 37945894 . T . PASS END=37945894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 37945895 . G . PASS END=37945898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 37945899 . A . PASS END=37945899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 37945900 . C . PASS END=37945903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 37945904 . G . PASS END=37945904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 37945905 . A . PASS END=37945998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1135:0,85,255:40,0 chr1 37945999 . G . PASS END=37945999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 37946000 . G . PASS END=37946000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 37946001 . A . PASS END=37946005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr1 37946006 . C . PASS END=37946011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:30:0,51,765:0,90,255:19,0 chr1 37946012 . C . PASS END=37946025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 37946026 . C . PASS END=37946030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 37947202 . A . PASS END=37947224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:35,0 chr1 37947225 . G . PASS END=37947225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1226:0,39,255:31,1 chr1 37947226 . A . PASS END=37947229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1180:0,69,255:35,1 chr1 37947230 . G . PASS END=37947250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1256:0,81,255:38,0 chr1 37947251 . A . PASS END=37947251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1480:0,74,255:38,0 chr1 37947252 . C . PASS END=37947345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1070:0,80,255:40,0 chr1 37947346 . A . PASS END=37947357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1086:0,74,255:26,0 chr1 37947358 . G . PASS END=37947363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 37947364 . T . PASS END=37947364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 37947365 . C . PASS END=37947366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 37947367 . A . PASS END=37947393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,945:0,65,255:26,0 chr1 37947394 . T . PASS END=37947394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:19,0 chr1 37947395 . C . PASS END=37947408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 37947409 . T . PASS END=37947432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,612:0,48,255:19,0 chr1 37947433 . A . PASS END=37947433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 37947434 . C . PASS END=37947434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 37947435 . A . PASS END=37947435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,491:0,34,255:16,0 chr1 37947436 . A . PASS END=37947436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 37947951 . C . PASS END=37947959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 37947960 . C . PASS END=37947961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 37947962 . A . PASS END=37947962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 37947963 . T . PASS END=37947965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 37947966 . G . PASS END=37947966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 37947967 . C . PASS END=37947968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 37947969 . C . PASS END=37947969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr1 37947970 . C . PASS END=37947981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1052:0,90,255:30,0 chr1 37947982 . T . PASS END=37947982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 37947983 . A . PASS END=37947985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 37947986 . A . PASS END=37947986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 37947987 . G . PASS END=37947993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:29,0 chr1 37947994 . C . PASS END=37947994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 37947995 . A . PASS END=37948174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:29:0,80,1125:0,80,255:40,0 chr1 37948175 . T . PASS END=37948203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,179,255:40,0 chr1 37948338 . G . PASS END=37948338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 37948339 . A . PASS END=37948364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:20:0,49,729:0,49,255:21,0 chr1 37948365 . G . PASS END=37948369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 37948370 . T . PASS END=37948371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 37948372 . C . PASS END=37948374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 37948375 . C . PASS END=37948375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 37948376 . C . PASS END=37948400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:24,0 chr1 37948401 . A . PASS END=37948401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 37948402 . G . PASS END=37948436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,856:0,72,255:26,0 chr1 37948437 . T . PASS END=37948437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 37948438 . C . PASS END=37948442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:20,0 chr1 37948443 . C . PASS END=37948449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr1 37948450 . C . PASS END=37948452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 37948453 . A . PASS END=37948453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:19,0 chr1 37948454 . G . PASS END=37948459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 37948460 . A . PASS END=37948460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:19,0 chr1 37948461 . G . PASS END=37948468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 37948469 . A . PASS END=37948469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:19,0 chr1 37948470 . A . PASS END=37948488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:21,0 chr1 37948489 . A . PASS END=37948489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 37948490 . C . PASS END=37948497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 37948498 . C . PASS END=37948523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,613:0,40,255:19,0 chr1 37948524 . G . PASS END=37948532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:16:0,34,540:0,34,255:13,0 chr1 37948533 . G . PASS END=37948534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 37948535 . A . PASS END=37948579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 37948580 . C . PASS END=37948588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 37948589 . G . PASS END=37948589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 37948590 . G . PASS END=37948590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 37948591 . T . PASS END=37948591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr1 37948592 . C . PASS END=37948617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,560:0,48,255:19,0 chr1 37948618 . C . PASS END=37948620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 37948621 . G . PASS END=37948622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 37948623 . G . PASS END=37948635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:22,0 chr1 37948636 . C . PASS END=37948636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 37948637 . G . PASS END=37948651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 37948652 . A . PASS END=37948652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 37948653 . G . PASS END=37948654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 37948655 . T . PASS END=37948655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 37948656 . T . PASS END=37948674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 37948675 . C . PASS END=37948675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 37948676 . C . PASS END=37948679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 37948680 . A . PASS END=37948680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 37948681 . G . PASS END=37948692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,908:0,72,255:24,0 chr1 37948693 . A . PASS END=37948693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 37948694 . C . PASS END=37948695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 37948696 . C . PASS END=37948696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 37948697 . C . PASS END=37948708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 37948709 . C . PASS END=37948730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:19,0 chr1 37948731 . T . PASS END=37948788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,32,255:13,0 chr1 37948789 . T . PASS END=37948789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 37948790 . G . PASS END=37948797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 37948798 . C . PASS END=37948821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 37948822 . C . PASS END=37948824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 37948825 . C . PASS END=37948830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 37948831 . C . PASS END=37948833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 37948834 . T . PASS END=37948834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 37948835 . G . PASS END=37948851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 37948852 . C . PASS END=37948881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 37948882 . C . PASS END=37948914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 37948915 . C . PASS END=37948921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,735:0,47,255:19,0 chr1 37948922 . C . PASS END=37948923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 37948924 . C . PASS END=37948967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 37948968 . A . PASS END=37948974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 37948975 . G . PASS END=37949003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,660:0,41,255:19,0 chr1 37949004 . C . PASS END=37949068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:24,0 chr1 37949069 . C . PASS END=37949070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 37949071 . G . PASS END=37949111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,825:0,62,255:26,0 chr1 37949112 . A . PASS END=37949112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 37949113 . C . PASS END=37949147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 37949148 . T . PASS END=37949198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,607:0,51,255:19,0 chr1 37949199 . A . PASS END=37949212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:13:0,36,540:0,39,255:13,0 chr1 37959370 . T . PASS END=37959412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:52:0,120,1800:0,125,255:40,0 chr1 37959413 . A . PASS END=37959415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,169,255:40,0 chr1 37959700 . C . PASS END=37959708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:65:0,120,1800:0,156,255:40,0 chr1 37961486 . A . PASS END=37961519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,186,255:40,0 chr1 37962193 . C . PASS END=37962205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,141,255:40,0 chr1 37962308 . T . PASS END=37962337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,146,255:40,0 chr1 37967405 . C . PASS END=37967418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,981:0,87,255:29,0 chr1 37967419 . A . PASS END=37967419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 37967420 . T . PASS END=37967432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr1 37967433 . T . PASS END=37967433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 37967434 . A . PASS END=37967576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:30:0,87,1125:0,90,255:40,0 chr1 37967577 . C . PASS END=37967577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 37967578 . C . PASS END=37967597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1157:0,90,255:32,0 chr1 37974879 . T . PASS END=37974924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:46:0,105,1528:0,105,255:40,0 chr1 37975056 . A . PASS END=37975143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,114,1606:0,114,255:40,0 chr1 37979024 . T . PASS END=37979163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,107,1496:0,107,255:40,0 chr1 37980258 . C . PASS END=37980299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 37980300 . C . PASS END=37980300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 37980301 . C . PASS END=37980301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 37980302 . G . PASS END=37980302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 37980303 . G . PASS END=37980318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,288:0,27,255:9,0 chr1 37980319 . G . PASS END=37980319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 37980320 . G . PASS END=37980323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 37980324 . C . PASS END=37980324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 37980325 . G . PASS END=37980341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,221:0,24,221:8,0 chr1 37980342 . C . PASS END=37980342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:4,0 chr1 37980343 . G . PASS END=37980346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,255:5,0 chr1 37980347 . T . PASS END=37980347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:3,0 chr1 38003349 . C . PASS END=38003603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:33:0,84,1235:0,90,255:40,0 chr1 38003604 . T . PASS END=38003613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 38005758 . C . PASS END=38005761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 38005762 . A . PASS END=38005762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 38005763 . T . PASS END=38005769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 38005770 . A . PASS END=38005789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:26,0 chr1 38005790 . A . PASS END=38005801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 38005802 . A . PASS END=38005802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 38005803 . A . PASS END=38005808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 38005809 . A . PASS END=38005809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 38005810 . T . PASS END=38005811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 38005812 . T . PASS END=38005812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:28,0 chr1 38005813 . C . PASS END=38006007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1139:0,80,255:40,0 chr1 38006008 . A . PASS END=38006008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1275:0,78,255:38,0 chr1 38006009 . G . PASS END=38006125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:40:0,81,1360:0,81,255:40,0 chr1 38006126 . T . PASS END=38006139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:43:0,96,1450:0,96,255:40,0 chr1 38006140 . A . PASS END=38006140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1403:0,68,255:40,0 chr1 38006141 . A . PASS END=38006162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,125,255:40,0 chr1 38006163 . G A, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.755;ReadPosRankSum=3.783;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,28,0:0.596,0.000:47:13,12,0:6,16,0:47:85,0,47,982,679,1662:255,0,255:19,0:5.0000e+01,8.9049e-05,4.9797e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,14,14:7,12,12,16 chr1 38006164 . C . PASS END=38006200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,103,1645:0,103,255:40,0 chr1 38006201 . C . PASS END=38006321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,118,1800:0,118,255:40,0 chr1 38006322 . T . PASS END=38006356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,120,1800:0,126,255:40,0 chr1 38014523 . T . PASS END=38014523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 38014524 . T . PASS END=38014532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr1 38014533 . T . PASS END=38014533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 38014534 . T . PASS END=38014575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 38014576 . G . PASS END=38014582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 38014583 . A . PASS END=38014588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38018246 . C . PASS END=38018269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:62:0,120,1800:0,156,255:40,0 chr1 38018270 . G . PASS END=38018306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,140,255:40,0 chr1 38018307 . C . LowGQ END=38018307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,13:80:0:80:0,0,2098:12,0,255:40,0 chr1 38018308 . T . PASS END=38018344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,165,255:40,0 chr1 38018345 . G . PASS END=38018348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,152,255:40,0 chr1 38019607 . C . PASS END=38019610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr1 38019611 . T . PASS END=38019611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 38019612 . A . PASS END=38019648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,451:0,36,255:13,0 chr1 38019649 . G . LowGQ END=38019649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 38019650 . C . PASS END=38019667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 38019668 . G . PASS END=38019675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 38019676 . C . PASS END=38019686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 38019687 . G . PASS END=38019687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38019688 . T . PASS END=38019688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 38019689 . G . PASS END=38019689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 38019690 . G . PASS END=38019691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38019692 . C . PASS END=38019699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 38019700 . C . PASS END=38019700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 38019701 . G . PASS END=38019702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 38019703 . T . PASS END=38019703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 38019704 . G . PASS END=38019718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 38019719 . C . PASS END=38019722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 38019723 . T . PASS END=38019728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 38019729 . G . PASS END=38019732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 38019733 . C . PASS END=38019799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,352:0,33,255:13,0 chr1 38019800 . C . PASS END=38019830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,288:0,24,255:8,0 chr1 38022530 . A . PASS END=38022542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,607:0,54,255:18,0 chr1 38022543 . A . PASS END=38022543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,429:0,7,255:15,0 chr1 38022544 . C . PASS END=38022546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 38022547 . G . PASS END=38022547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 38022548 . G . PASS END=38022548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:25,0 chr1 38022549 . C . PASS END=38022551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:25,0 chr1 38022552 . A . PASS END=38022560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:33,0 chr1 38022561 . A . PASS END=38022561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 38022562 . G . PASS END=38022654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:29:0,81,1215:0,81,255:40,0 chr1 38022655 . C . PASS END=38022674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,894:0,75,255:26,0 chr1 38022675 . A . PASS END=38022675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:19,0 chr1 38022676 . G . PASS END=38022676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 38023204 . G . PASS END=38023211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 38023212 . A . PASS END=38023240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:29,0 chr1 38023241 . C . PASS END=38023273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,976:0,65,255:26,0 chr1 38023274 . A . PASS END=38023274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 38023275 . G . PASS END=38023291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:20,0 chr1 38023292 . G . PASS END=38023322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 38023323 . A . PASS END=38023323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 38023324 . A . PASS END=38023327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 38023328 . T . PASS END=38023328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 38023329 . G . PASS END=38023336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 38023337 . T . PASS END=38023337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 38023338 . A . PASS END=38023340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 38023341 . A . PASS END=38023349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 38024928 . G . PASS END=38024933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:19,0 chr1 38024934 . G . PASS END=38024938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 38024939 . A . PASS END=38024941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 38024942 . A . PASS END=38024998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,870:0,62,255:26,0 chr1 38024999 . T . PASS END=38024999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 38025000 . G . PASS END=38025003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,992:0,68,255:25,0 chr1 38025004 . C . PASS END=38025004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38025005 . T . PASS END=38025005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:27,0 chr1 38025006 . C . PASS END=38025006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 38025007 . C . PASS END=38025008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:28,0 chr1 38025009 . G . PASS END=38025022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 38025023 . T . PASS END=38025023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,923:0,32,255:24,0 chr1 38025024 . A . PASS END=38025028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 38025029 . T . PASS END=38025030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:27,0 chr1 38025031 . C . PASS END=38025048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1111:0,90,255:31,0 chr1 38025049 . G . PASS END=38025049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 38025050 . A . PASS END=38025055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1123:0,80,255:31,0 chr1 38025056 . G . PASS END=38025056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 38025057 . C . PASS END=38025060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 38025061 . T . PASS END=38025061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:27,0 chr1 38025062 . G . PASS END=38025062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 38025063 . C . PASS END=38025063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 38025064 . C . PASS END=38025067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 38025068 . T . PASS END=38025068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 38025069 . C . PASS END=38025069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38025070 . C . PASS END=38025071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:53:28:0,53,963:0,53,255:26,0 chr1 38025072 . C . PASS END=38025075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38025076 . G . PASS END=38025076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 38025077 . A . PASS END=38025077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38025078 . A . PASS END=38025078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr1 38025079 . C . PASS END=38025079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38025080 . T . PASS END=38025097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,857:0,67,255:26,0 chr1 38027158 . A . PASS END=38027165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,960:0,78,255:26,0 chr1 38027166 . A . PASS END=38027168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 38027169 . C . PASS END=38027169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 38027170 . G . PASS END=38027185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1033:0,84,255:34,0 chr1 38027186 . C . PASS END=38027190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,102,1530:0,105,255:38,0 chr1 38027191 . C . PASS END=38027191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 38027192 . G . PASS END=38027336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,86,255:40,0 chr1 38027682 . A . PASS END=38027846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:51:0,120,1800:0,132,255:40,0 chr1 38030627 . G . PASS END=38030662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:73:0,120,1800:0,206,255:40,0 chr1 38032456 . T . PASS END=38032456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:41:45:0,41,1482:0,41,255:40,0 chr1 38032457 . T . PASS END=38032608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:85:45:0,85,1373:0,85,255:40,0 chr1 38033274 . T . PASS END=38033365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:49:0,120,1800:0,135,255:40,0 chr1 38033876 . C . PASS END=38033958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:64:0,120,1800:0,165,255:40,0 chr1 38034452 . C . PASS END=38034744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:40:0,96,1435:0,96,255:40,0 chr1 38034745 . A . PASS END=38034745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1275:0,62,255:34,0 chr1 38034746 . A . PASS END=38034819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,84,255:40,0 chr1 38034820 . T . PASS END=38034824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:26,0 chr1 38034825 . C . PASS END=38034830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38034831 . T . PASS END=38034831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:26,0 chr1 38034832 . T . PASS END=38034832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 38034833 . T . PASS END=38034836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 38034837 . T . PASS END=38034837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 38034838 . G . PASS END=38034839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 38034840 . C . PASS END=38034841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 38034842 . T . PASS END=38034843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 38034844 . C . PASS END=38034845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:25,0 chr1 38034846 . C . PASS END=38034849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38034850 . T . PASS END=38034850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,944:0,73,255:26,0 chr1 38034851 . G . PASS END=38034851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,968:0,35,255:25,0 chr1 38034852 . G . PASS END=38034852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 38034853 . A . PASS END=38034853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38034854 . T . PASS END=38034866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:24:0,68,984:0,68,255:24,0 chr1 38034867 . C . PASS END=38034868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 38034869 . T . PASS END=38034869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:21,0 chr1 38034870 . C . PASS END=38034871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 38034872 . G . PASS END=38034872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 38034873 . G . PASS END=38034873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 38034874 . G . PASS END=38034874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 38034875 . A . PASS END=38034884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 38034885 . A . PASS END=38034885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:20,0 chr1 38034886 . A . PASS END=38034888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 38034889 . T . PASS END=38034890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,709:0,49,255:20,0 chr1 38034891 . A . PASS END=38034891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 38034892 . G . PASS END=38034897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:16,0 chr1 38034898 . T . PASS END=38034898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:13,0 chr1 38034899 . A . PASS END=38034899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:22:0,42,630:0,49,255:13,0 chr1 38034900 . G . PASS END=38034903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:22:0,36,540:0,50,255:12,0 chr1 38039944 . C . PASS END=38040057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1261:0,81,255:40,0 chr1 38040266 . C . PASS END=38040424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:34:0,84,1260:0,92,255:40,1 chr1 38041196 . A . PASS END=38041300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:36:0,92,1318:0,92,255:40,0 chr1 38042029 . C . PASS END=38042157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,116,1620:0,116,255:40,0 chr1 38046943 . A . PASS END=38046957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1349:0,98,255:38,0 chr1 38046958 . A . PASS END=38046963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1296:0,94,255:36,0 chr1 38046964 . T . PASS END=38046964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr1 38046965 . T . PASS END=38047111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,96,255:40,0 chr1 38047112 . A . PASS END=38047121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:25,0 chr1 38047122 . G . PASS END=38047128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 38047129 . G . PASS END=38047129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:18,0 chr1 38047130 . A . PASS END=38047146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 38047824 . C . PASS END=38047934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:37:0,84,1311:0,84,255:40,0 chr1 38047935 . T . PASS END=38047935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:30,0 chr1 38047936 . T . PASS END=38047936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 38047937 . T . PASS END=38047937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1138:0,72,255:28,0 chr1 38048379 . T . PASS END=38048537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:41:0,108,1620:0,113,255:40,0 chr1 38049468 . C . PASS END=38049514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:86:0,120,1800:0,247,255:40,0 chr1 38049515 . T . PASS END=38049534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:78:0,120,1800:0,207,255:40,0 chr1 38052912 . C . PASS END=38052912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 38052913 . T . PASS END=38052913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,768:0,20,255:23,0 chr1 38052914 . C . PASS END=38052914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 38052915 . A . PASS END=38052916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,834:0,64,255:25,0 chr1 38052917 . A . PASS END=38052917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:26,0 chr1 38052918 . C . PASS END=38052919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 38052920 . A . PASS END=38052920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,991:0,57,255:31,0 chr1 38052921 . G . PASS END=38052923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1066:0,82,255:32,0 chr1 38052924 . T . PASS END=38052924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:31,0 chr1 38052925 . C . PASS END=38052927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:32,0 chr1 38052928 . C . PASS END=38052928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1105:0,63,255:33,0 chr1 38052929 . A . PASS END=38052929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:32,0 chr1 38052930 . G . PASS END=38052930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:33,0 chr1 38052931 . T . PASS END=38052932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 38052933 . A . PASS END=38052934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:34,0 chr1 38052935 . C . PASS END=38052935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:33,0 chr1 38052936 . A . PASS END=38052936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1186:0,50,255:33,0 chr1 38052937 . A . PASS END=38052938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:33,0 chr1 38052939 . T . PASS END=38052939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:14:36:0,14,1117:0,14,255:33,0 chr1 38052940 . C . PASS END=38052940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:20:36:0,20,1130:0,20,255:31,0 chr1 38052941 . A . PASS END=38052943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1168:0,88,255:33,0 chr1 38052944 . A . PASS END=38052944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1192:0,58,255:32,0 chr1 38052945 . T . PASS END=38052947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,109,1444:0,109,255:40,0 chr1 38052948 . T . PASS END=38052948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:40,0 chr1 38052949 . T . PASS END=38052960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:43:0,90,1499:0,90,255:40,0 chr1 38052961 . A . PASS END=38052961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:59:51:0,59,1638:0,59,255:40,0 chr1 38052962 . G . PASS END=38053096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:34:0,81,1215:0,97,255:40,0 chr1 38056307 . A . PASS END=38056446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:54:0,120,1800:0,146,255:40,0 chr1 38058313 . C . PASS END=38058407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,120,255:40,0 chr1 38059363 . C . PASS END=38059387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1033:0,84,255:35,0 chr1 38059388 . T . PASS END=38059388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr1 38059389 . C . PASS END=38059392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 38059393 . C . PASS END=38059393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr1 38059394 . G . PASS END=38059407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1296:0,117,255:40,0 chr1 38059408 . C . PASS END=38059408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1213:0,70,255:37,0 chr1 38059409 . G . PASS END=38059447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1395:0,102,255:40,0 chr1 38061360 . C . PASS END=38061423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:36:0,93,1251:0,93,255:40,0 chr1 38078427 . C . PASS END=38078427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 38078428 . T . PASS END=38078428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 38078429 . A . PASS END=38078437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr1 38078438 . C . PASS END=38078438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 38078439 . T . PASS END=38078439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 38078440 . G . PASS END=38078461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,894:0,63,255:26,0 chr1 38078462 . T . PASS END=38078465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 38078466 . T . PASS END=38078466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 38078467 . T . PASS END=38078481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 38078482 . T . PASS END=38078482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 38078483 . G . PASS END=38078495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1070:0,84,255:31,0 chr1 38078496 . T . PASS END=38078496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 38078497 . C . PASS END=38078570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1095:0,82,255:34,0 chr1 38078571 . G . PASS END=38078573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1067:0,60,255:26,0 chr1 38078574 . T . PASS END=38078575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38078576 . C . PASS END=38078581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:23,0 chr1 38078582 . T . PASS END=38078593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:23:0,45,675:0,52,255:18,0 chr1 38079376 . C . PASS END=38079377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 38079378 . T . PASS END=38079378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38079379 . C . PASS END=38079379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 38079380 . A . PASS END=38079382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38079383 . A . PASS END=38079387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38079388 . G . PASS END=38079390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 38079391 . C . PASS END=38079415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,560:0,40,255:19,0 chr1 38079416 . C . PASS END=38079423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,730:0,60,255:21,0 chr1 38079424 . T . PASS END=38079424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 38079425 . G . PASS END=38079440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr1 38079441 . T . PASS END=38079441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 38079442 . G . PASS END=38079454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,955:0,69,255:26,0 chr1 38079455 . G . PASS END=38079455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 38079456 . G . PASS END=38079457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 38079458 . A . PASS END=38079462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38079463 . G . PASS END=38079479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 38079480 . T . PASS END=38079511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 38079512 . C . PASS END=38079516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,759:0,47,255:18,0 chr1 38079517 . T G, 49.98 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=-0.458;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:7,6,0:4,4,0:47:85,0,47,185,185,185:255,0,255:10,0:4.9977e+01,8.6978e-05,5.0000e+01,1.8475e+02,2.1952e+02,1.8776e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,5,6,4:4,7,6,4 chr1 38079518 . C . PASS END=38079539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 38079540 . G . PASS END=38079554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 38079555 . T . PASS END=38079564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:12,0 chr1 38079856 . C . PASS END=38079863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,645:0,44,255:19,0 chr1 38079864 . C . PASS END=38079879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 38079880 . C . PASS END=38079880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 38079881 . A . PASS END=38079911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:26,0 chr1 38079912 . G . PASS END=38079918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 38079919 . A . PASS END=38079919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 38079920 . G . PASS END=38079961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1027:0,85,255:34,0 chr1 38079962 . G . PASS END=38079976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:25,0 chr1 38079977 . G . PASS END=38079981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:25:0,44,855:0,44,255:19,0 chr1 38079982 . C . PASS END=38079985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 38079986 . A . PASS END=38079986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 38079987 . C . PASS END=38079993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 38079994 . C . PASS END=38080005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 38082155 . C . PASS END=38082159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 38082160 . G . PASS END=38082160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,756:0,41,255:23,0 chr1 38082161 . C . PASS END=38082163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 38082164 . T . PASS END=38082165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 38082166 . G . PASS END=38082169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:24,0 chr1 38082170 . A . PASS END=38082170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 38082171 . T . PASS END=38082183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 38082184 . G . PASS END=38082184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 38082185 . G . PASS END=38082194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 38082195 . A . PASS END=38082200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,979:0,84,255:28,0 chr1 38082201 . G . PASS END=38082202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 38082203 . G . PASS END=38082304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1074:0,80,255:33,0 chr1 38082305 . A . PASS END=38082328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr1 38082329 . T . PASS END=38082347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:19,0 chr1 38095240 . T . PASS END=38095241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 38095242 . C . PASS END=38095242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 38095243 . G . PASS END=38095244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 38095245 . C . PASS END=38095245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 38095246 . T . PASS END=38095254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,673:0,41,255:17,0 chr1 38095255 . T . PASS END=38095255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,1 chr1 38095256 . C . PASS END=38095256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,641:0,22,255:18,1 chr1 38095257 . C . PASS END=38095257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:19,0 chr1 38095258 . C . PASS END=38095263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 38095264 . T . PASS END=38095279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 38095280 . G . PASS END=38095280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 38095281 . G . PASS END=38095307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 38095308 . G . PASS END=38095310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 38095311 . A . PASS END=38095323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:21,0 chr1 38095324 . C . PASS END=38095324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 38095325 . A . PASS END=38095333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 38095561 . C . PASS END=38095573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,157,255:40,0 chr1 38148754 . T . PASS END=38148764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,112,1523:0,112,255:40,0 chr1 38148765 . A G, 194.47 PASS DP=50;MQ=250.00;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,23,0:0,26,0:144:232,147,0,1888,147,1888:255,147,0:0,0:1.9447e+02,1.4447e+02,0.0000e+00,4.5000e+02,1.7924e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,14:0,0,21,28 chr1 38148766 . C . PASS END=38148802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,143,255:40,0 chr1 38148803 . C . PASS END=38148832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,123,255:40,0 chr1 38148991 . C . PASS END=38149038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:66:0,120,1800:0,153,255:40,0 chr1 38149039 . T . PASS END=38149075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,197,255:40,0 chr1 38149076 . G A, 50.00 PASS DP=81;MQ=250.00;MQRankSum=7.741;ReadPosRankSum=4.926;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,41,0:0.506,0.000:81:20,17,0:20,24,0:48:85,0,50,1438,1419,2857:255,0,255:33,0:5.0000e+01,6.5233e-05,5.2990e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,27,20,21:21,19,18,23 chr1 38149077 . A . PASS END=38149113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:65:0,120,1800:0,162,255:40,0 chr1 38151945 . G . PASS END=38151954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:23,0 chr1 38151955 . A . PASS END=38151955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:20,0 chr1 38151956 . A . PASS END=38151993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,873:0,69,255:26,0 chr1 38151994 . C . PASS END=38152068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,956:0,81,255:35,0 chr1 38152069 . G . PASS END=38152069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 38152070 . A . PASS END=38152076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 38152077 . C . PASS END=38152086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 38152087 . G . PASS END=38152087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38152088 . G . PASS END=38152088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr1 38152089 . C . PASS END=38152092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:30,0 chr1 38152093 . T . PASS END=38152093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 38152094 . G . PASS END=38152098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1125:0,90,255:31,0 chr1 38152099 . T . PASS END=38152099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr1 38152100 . G . PASS END=38152103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 38152104 . C . PASS END=38152124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:25,0 chr1 38155278 . A . PASS END=38155287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 38155288 . C . PASS END=38155288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 38155289 . T . PASS END=38155290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 38155291 . G . PASS END=38155292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 38155293 . T . PASS END=38155293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 38155294 . T . PASS END=38155294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 38155295 . G . PASS END=38155302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr1 38155303 . C . PASS END=38155305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 38155306 . T . PASS END=38155306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 38155307 . G . PASS END=38155323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,645:0,51,255:19,0 chr1 38155324 . G . PASS END=38155329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 38155330 . G . PASS END=38155330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 38155331 . C . PASS END=38155348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,68,255:22,0 chr1 38155349 . A . PASS END=38155360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,751:0,50,255:20,0 chr1 38155361 . C . PASS END=38155372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,786:0,63,255:22,0 chr1 38155373 . C . PASS END=38155384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 38155385 . C . PASS END=38155396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 38155397 . T . PASS END=38155400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 38155401 . G . PASS END=38155409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 38155410 . T . PASS END=38155432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:19,0 chr1 38155433 . G . PASS END=38155438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 38155439 . G . PASS END=38155442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,810:0,53,255:19,0 chr1 38155443 . G . PASS END=38155443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 38155444 . G . PASS END=38155445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 38155446 . T . PASS END=38155446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 38155447 . G . PASS END=38155461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 38155462 . C . PASS END=38155462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 38155463 . A . PASS END=38155473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,53,255:19,0 chr1 38155474 . G . PASS END=38155493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 38155494 . A . PASS END=38155495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 38155496 . G . PASS END=38155529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:26,0 chr1 38155530 . A . PASS END=38155530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 38155531 . G . PASS END=38155541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:28,0 chr1 38155542 . T . PASS END=38155544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 38155545 . T . PASS END=38155545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 38155546 . G . PASS END=38155546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 38155547 . A . PASS END=38155547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 38155548 . G . PASS END=38155550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 38155551 . A . PASS END=38155551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 38155552 . T . PASS END=38155558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1080:0,90,255:30,0 chr1 38155559 . C . PASS END=38155559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 38155560 . T . PASS END=38155570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:30,0 chr1 38155571 . A . PASS END=38155571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 38155572 . A . PASS END=38155577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38155578 . A . PASS END=38155578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 38155579 . A . PASS END=38155586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 38155587 . A . PASS END=38155587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr1 38155588 . C . PASS END=38155589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 38155590 . T . PASS END=38155590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 38155591 . T . PASS END=38155595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 38155596 . T . PASS END=38155596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 38155597 . G . PASS END=38155597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 38155598 . C . PASS END=38155599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 38155600 . A . PASS END=38155600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 38155601 . A . PASS END=38155601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 38155602 . G . PASS END=38155629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1109:0,80,255:33,0 chr1 38155630 . T . PASS END=38155630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:29,0 chr1 38155631 . G . PASS END=38155633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1135:0,82,255:31,0 chr1 38155634 . C . PASS END=38155634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 38155635 . G . PASS END=38155635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:31,0 chr1 38155636 . T . PASS END=38155636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr1 38155637 . C . PASS END=38155639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:31,0 chr1 38155936 . C . PASS END=38155937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 38155938 . T . PASS END=38155938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 38155939 . G . PASS END=38155946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 38155947 . G . PASS END=38155947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 38155948 . C . PASS END=38155997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:25,0 chr1 38155998 . A . PASS END=38155998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 38155999 . G . PASS END=38156013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 38156014 . G . PASS END=38156053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,47,255:19,0 chr1 38156054 . C . PASS END=38156054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 38156055 . G . PASS END=38156070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,599:0,48,255:17,0 chr1 38158363 . A . PASS END=38158397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,535:0,42,255:19,0 chr1 38158398 . G . PASS END=38158401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 38158402 . A . PASS END=38158403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,625:0,46,255:19,0 chr1 38158404 . C . PASS END=38158419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 38158420 . A . PASS END=38158427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 38158428 . C . PASS END=38158435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 38158436 . T . PASS END=38158454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 38158455 . A . PASS END=38158455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:16,0 chr1 38158456 . G . PASS END=38158456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 38158577 . T . PASS END=38158579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 38158580 . A . PASS END=38158580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 38158581 . A . PASS END=38158599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,758:0,69,255:24,0 chr1 38158600 . G . PASS END=38158604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 38158605 . A . PASS END=38158605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 38158606 . G . PASS END=38158622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 38158623 . C . PASS END=38158623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 38158624 . A . PASS END=38158624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38158625 . A . PASS END=38158626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 38158627 . G . PASS END=38158627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38158628 . A . PASS END=38158629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 38158630 . G . PASS END=38158659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,92,255:36,0 chr1 38158660 . C . PASS END=38158660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1209:0,53,255:29,0 chr1 38158661 . G . PASS END=38158686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,95,255:33,0 chr1 38158687 . A . PASS END=38158697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:74:29:0,74,1100:0,74,255:26,0 chr1 38158698 . C . PASS END=38158699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38158700 . A . PASS END=38158705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 38161582 . C . PASS END=38161622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,184,255:40,0 chr1 38164577 . G . PASS END=38164649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,140,255:40,0 chr1 38166108 . C . PASS END=38166193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:61:0,120,1800:0,167,255:40,1 chr1 38167426 . G . PASS END=38167490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,161,255:40,1 chr1 38168924 . G . PASS END=38168931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:25,0 chr1 38168932 . G . PASS END=38168937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 38168938 . A . PASS END=38168940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 38168941 . C . PASS END=38168972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1133:0,80,255:30,0 chr1 38168973 . T . PASS END=38168973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1030:0,43,255:26,0 chr1 38168974 . C . PASS END=38168974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 38168975 . C . PASS END=38168983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1084:0,87,255:29,0 chr1 38168984 . A . PASS END=38168984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:27,0 chr1 38168985 . C . PASS END=38168996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 38168997 . C . PASS END=38168997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 38168998 . T . PASS END=38168999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38169000 . A . PASS END=38169005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 38169006 . A . PASS END=38169006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 38169007 . G . PASS END=38169016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,832:0,64,255:25,0 chr1 38169017 . A . PASS END=38169017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:20,0 chr1 38169018 . A . PASS END=38169019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 38171113 . G . PASS END=38171114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 38171115 . T . PASS END=38171117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:22,0 chr1 38171118 . T . PASS END=38171119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 38171120 . A . PASS END=38171123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 38171124 . C . PASS END=38171202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1002:0,81,255:40,0 chr1 38171203 . A . PASS END=38171203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:17:38:0,17,1062:0,17,255:32,0 chr1 38171204 . G . PASS END=38171233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1108:0,80,255:36,0 chr1 38171234 . G . PASS END=38171234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 38171235 . G . PASS END=38171235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:28,0 chr1 38171236 . A . PASS END=38171239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 38172650 . A . PASS END=38172736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,105,1398:0,107,255:40,0 chr1 38173994 . A . PASS END=38174033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,124,255:40,0 chr1 38174034 . A . PASS END=38174038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 38181648 . T . PASS END=38181669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:76:0,120,1800:0,215,255:40,0 chr1 38184044 . T . PASS END=38184048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:19,0 chr1 38184049 . C . PASS END=38184082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:22:0,62,889:0,62,255:26,0 chr1 38184083 . T . PASS END=38184084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 38184085 . C . PASS END=38184086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:27:0,74,1070:0,74,255:28,0 chr1 38184087 . T . PASS END=38184090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 38184091 . G . PASS END=38184091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 38184092 . G . PASS END=38184124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:30,0 chr1 38184125 . T . PASS END=38184125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 38184126 . T . PASS END=38184130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1124:0,87,255:29,0 chr1 38184131 . C . PASS END=38184131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 38184132 . A . PASS END=38184135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 38184136 . A . PASS END=38184152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,895:0,70,255:26,0 chr1 38184153 . A . PASS END=38184153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 38184154 . G . PASS END=38184158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 38184333 . T . PASS END=38184342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 38184343 . T . PASS END=38184353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:30,0 chr1 38184354 . G . PASS END=38184358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1170:0,93,255:31,0 chr1 38184359 . C . PASS END=38184359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 38184360 . A . PASS END=38184432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1150:0,83,255:39,0 chr1 38184433 . C . PASS END=38184444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1077:0,88,255:33,0 chr1 38184445 . A . PASS END=38184455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 38184456 . G . PASS END=38184462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 38184463 . C . PASS END=38184469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 38184470 . C G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=2.386;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,17,0:0.567,0.000:30:4,6,0:9,11,0:48:85,0,49,604,457,1060:255,0,255:11,0:5.0000e+01,7.1964e-05,5.1838e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,9,8:6,7,10,7 chr1 38184471 . G . PASS END=38184488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 38184625 . A . PASS END=38184725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,89,255:39,0 chr1 38185086 . C . PASS END=38185096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,684:0,57,255:19,0 chr1 38185097 . A . PASS END=38185104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 38185105 . C . PASS END=38185106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 38185107 . C . PASS END=38185129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr1 38185130 . C . PASS END=38185134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:31,0 chr1 38185135 . T . PASS END=38185135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 38185136 . C . PASS END=38185146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 38185147 . T . PASS END=38185147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 38185148 . G . PASS END=38185151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 38185152 . T . PASS END=38185152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 38185153 . G . PASS END=38185158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr1 38185159 . G . PASS END=38185159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 38185160 . G . PASS END=38185188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,949:0,90,255:32,0 chr1 38185189 . T . PASS END=38185190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 38185191 . T . PASS END=38185207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 38185208 . T . PASS END=38185208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 38185209 . A . PASS END=38185210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 38185211 . T . PASS END=38185211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 38185212 . C . PASS END=38185232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:30,0 chr1 38185233 . T . PASS END=38185236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:26,0 chr1 38185237 . T . PASS END=38185239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:25,1 chr1 38185240 . G . PASS END=38185240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 38185241 . G . PASS END=38185241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:25,0 chr1 38185242 . G . PASS END=38185272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 38185273 . T . PASS END=38185274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 38185275 . A . PASS END=38185279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 38185581 . G . PASS END=38185592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 38185593 . C . PASS END=38185601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 38185602 . G . PASS END=38185606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 38185607 . G . PASS END=38185610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 38185611 . C . PASS END=38185614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr1 38185615 . C . PASS END=38185667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1078:0,84,255:31,0 chr1 38185668 . A . PASS END=38185668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 38185669 . G . PASS END=38185672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:27,0 chr1 38185673 . T . PASS END=38185678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1078:0,74,255:26,0 chr1 38185679 . G . PASS END=38185680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38185681 . C . PASS END=38185683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 38185684 . A . PASS END=38185684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38185685 . A . PASS END=38185686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 38185687 . T . PASS END=38185687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:25,0 chr1 38185688 . G . PASS END=38185710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 38185711 . A . PASS END=38185711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr1 38185712 . G . PASS END=38185714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 38185715 . C . PASS END=38185730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,660:0,41,255:19,0 chr1 38186023 . C . PASS END=38186028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 38186029 . G . PASS END=38186033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 38186034 . A . PASS END=38186034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 38186035 . G . PASS END=38186047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,958:0,84,255:29,0 chr1 38186048 . C . PASS END=38186048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 38186049 . G . PASS END=38186053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 38186054 . C . PASS END=38186054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 38186055 . G . PASS END=38186078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1166:0,80,255:32,0 chr1 38186079 . T . PASS END=38186079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:27,0 chr1 38186080 . C . PASS END=38186089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 38186090 . A . PASS END=38186090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 38186091 . G . PASS END=38186091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 38186092 . G . PASS END=38186092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 38186093 . T . PASS END=38186118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:31,0 chr1 38186119 . T . PASS END=38186119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 38186120 . G . PASS END=38186142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:31,0 chr1 38186143 . C . PASS END=38186143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:26,0 chr1 38186144 . A . PASS END=38186144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 38186145 . T . PASS END=38186145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:28,0 chr1 38186146 . C . PASS END=38186151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 38186152 . C . PASS END=38186152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 38186153 . A . PASS END=38186153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:27,0 chr1 38186154 . G . PASS END=38186158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 38186159 . T . PASS END=38186188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 38186189 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.140;ReadPosRankSum=1.723;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,18,0:0.667,0.000:27:5,10,0:4,8,0:45:85,0,44,610,314,924:255,0,255:8,0:5.0000e+01,1.3875e-04,4.6580e+01,4.5000e+02,3.4870e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,6,12:3,6,8,10 chr1 38186190 . C . PASS END=38186195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 38186196 . G . PASS END=38186196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 38186197 . T . PASS END=38186197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 38186198 . T . PASS END=38186198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 38186199 . G . PASS END=38186201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 38186202 . C . PASS END=38186202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 38186203 . A . PASS END=38186211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 38186212 . C . PASS END=38186226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 38186455 . C . PASS END=38186516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,108,1476:0,109,255:40,0 chr1 38187332 . C . PASS END=38187353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 38187354 . C . PASS END=38187354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 38187355 . C . PASS END=38187363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:19,0 chr1 38187364 . T . PASS END=38187368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 38187369 . A . PASS END=38187385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 38187386 . G . PASS END=38187402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 38187403 . A . PASS END=38187403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 38187404 . G . PASS END=38187409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 38187410 . C . PASS END=38187414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,869:0,66,255:23,0 chr1 38187415 . C . PASS END=38187415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 38187416 . T . PASS END=38187421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 38187422 . A . PASS END=38187422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 38187423 . G . PASS END=38187446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:24,0 chr1 38187447 . A G, 49.31 PASS DP=25;MQ=248.94;MQRankSum=4.188;ReadPosRankSum=1.779;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:5,6,0:9,5,0:48:84,0,50,393,472,865:255,0,255:13,0:4.9308e+01,7.2740e-05,5.3000e+01,3.9341e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,6,5:11,3,7,4 chr1 38187448 . T . PASS END=38187459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,62,255:24,0 chr1 38187460 . A . PASS END=38187484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,698:0,54,255:19,0 chr1 38187485 . G . PASS END=38187517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,645:0,48,255:18,0 chr1 38187946 . T . PASS END=38187951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,128,255:40,0 chr1 38187952 . G . PASS END=38187968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,128,255:40,0 chr1 38188477 . C . PASS END=38188477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 38188478 . T . PASS END=38188487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,566:0,45,255:19,0 chr1 38188488 . G . PASS END=38188488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 38188489 . G . PASS END=38188492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 38188493 . G . PASS END=38188497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 38188498 . A . PASS END=38188498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 38188499 . C . PASS END=38188501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 38188502 . A . PASS END=38188502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 38188503 . C . PASS END=38188536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,947:0,65,255:26,0 chr1 38188537 . G . PASS END=38188573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 38188574 . G A, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=2.571;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,13,0:0.619,0.000:21:5,8,0:3,5,0:47:85,0,47,457,257,714:255,0,225:8,0:5.0000e+01,8.5683e-05,5.0129e+01,4.5000e+02,2.9213e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,8,5:3,5,5,8 chr1 38188575 . A . PASS END=38188603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:23,0 chr1 38188713 . C . PASS END=38188803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:41:0,105,1521:0,105,255:40,0 chr1 38188804 . G . PASS END=38188831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1180:0,83,255:37,0 chr1 38188832 . A . PASS END=38188832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:30,0 chr1 38188833 . C . PASS END=38188838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:33,0 chr1 38188983 . A . PASS END=38188983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 38188984 . G . PASS END=38189002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:26,0 chr1 38189003 . T . PASS END=38189007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 38189008 . A . PASS END=38189036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,71,255:26,0 chr1 38189037 . T . PASS END=38189044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 38192774 . C . PASS END=38192782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,597:0,40,255:18,0 chr1 38192783 . A . PASS END=38192783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 38192784 . T . PASS END=38192785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 38192786 . G . PASS END=38192802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:22,0 chr1 38192803 . G . PASS END=38192803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 38192804 . G . PASS END=38192816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:23,0 chr1 38192817 . G . PASS END=38192817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 38192818 . G . PASS END=38192818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 38192819 . A . PASS END=38192819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 38192820 . G . PASS END=38192825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 38192826 . A . PASS END=38192826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 38192827 . G . PASS END=38192831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,747:0,63,255:21,0 chr1 38192832 . T . PASS END=38192838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 38192839 . G . PASS END=38192840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 38192841 . T . PASS END=38192846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 38192847 . C . PASS END=38192860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 38192861 . T . PASS END=38192882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,674:0,44,255:19,0 chr1 38197083 . C . PASS END=38197093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:26,0 chr1 38197094 . G . PASS END=38197104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,948:0,81,255:31,0 chr1 38197105 . A . PASS END=38197106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:30,0 chr1 38197107 . T . PASS END=38197108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 38197109 . C . PASS END=38197109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:29,0 chr1 38197110 . T . PASS END=38197234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1127:0,88,255:40,0 chr1 38197235 . T . PASS END=38197243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:27:0,66,990:0,81,255:26,0 chr1 38197244 . T . PASS END=38197254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:52:23:0,52,768:0,52,255:19,0 chr1 38200336 . T . PASS END=38200359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,144,255:40,0 chr1 38200929 . C . PASS END=38200930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 38200931 . T . PASS END=38200931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,766:0,53,255:22,0 chr1 38200932 . C . PASS END=38200935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 38200936 . T . PASS END=38200936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 38200937 . A . PASS END=38200939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,892:0,69,255:26,0 chr1 38200940 . A . PASS END=38200940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 38200941 . T . PASS END=38200944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 38200945 . A . PASS END=38200962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1080:0,80,255:32,0 chr1 38200963 . T . PASS END=38200963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 38200964 . T . PASS END=38201018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1172:0,83,255:36,0 chr1 38201019 . G . PASS END=38201026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 38201027 . C . PASS END=38201030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38201031 . G . PASS END=38201037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 38201038 . C . PASS END=38201038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr1 38201039 . G . PASS END=38201044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:24,0 chr1 38201045 . C . PASS END=38201045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 38201046 . A . PASS END=38201049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 38201050 . T . PASS END=38201060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:20:0,55,815:0,55,255:19,0 chr1 38201061 . C . PASS END=38201062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 38218169 . C . PASS END=38218181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 38218182 . A . PASS END=38218183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 38218184 . A . PASS END=38218193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 38218194 . C . PASS END=38218201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:16,0 chr1 38218202 . A . PASS END=38218202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:14,0 chr1 38218203 . C . PASS END=38218216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:18,0 chr1 38218217 . G . PASS END=38218219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 38218220 . G . PASS END=38218221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 38218222 . A . PASS END=38218222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 38218223 . C . PASS END=38218228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:22,0 chr1 38218229 . C . PASS END=38218229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 38218230 . T . PASS END=38218230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,646:0,36,255:20,0 chr1 38218231 . T . PASS END=38218231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 38218232 . T . PASS END=38218232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 38218233 . G . PASS END=38218240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 38218241 . A . PASS END=38218241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 38218242 . G . PASS END=38218245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 38218246 . A . PASS END=38218246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,844:0,59,255:22,0 chr1 38218247 . G . PASS END=38218253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,945:0,62,255:24,0 chr1 38218254 . A G, 121.78 PASS DP=25;MQ=247.49;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,924,75,924:255,75,0:0,0:1.2178e+02,7.1778e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,11:0,0,13,12 chr1 38218255 . G . PASS END=38218267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 38218268 . T . PASS END=38218268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 38218269 . G . PASS END=38218271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 38218272 . T . PASS END=38218272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 38218273 . C . PASS END=38218282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr1 38218283 . C . PASS END=38218284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 38218285 . A . PASS END=38218285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 38218286 . C . PASS END=38218286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 38218287 . A . PASS END=38218287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 38218288 . G . PASS END=38218291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 38218292 . C . PASS END=38218295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1163:0,90,255:30,0 chr1 38218296 . C . PASS END=38218296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 38218297 . G . PASS END=38218299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 38218300 . T . PASS END=38218300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr1 38218301 . C . PASS END=38218304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 38218305 . T . PASS END=38218305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 38218306 . C . PASS END=38218307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 38218308 . G . PASS END=38218308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 38218309 . G . PASS END=38218311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 38218312 . C . PASS END=38218326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:24,0 chr1 38218327 . G . PASS END=38218327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 38218328 . C . PASS END=38218330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 38218331 . G . PASS END=38218331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr1 38218332 . C . PASS END=38218332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 38218333 . A . PASS END=38218334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 38218548 . C . PASS END=38218574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 38218575 . G . PASS END=38218577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 38218578 . C . PASS END=38218582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,211:6,0 chr1 38218583 . G . PASS END=38218583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 38218584 . T . PASS END=38218636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,182:6,0 chr1 38218637 . A . PASS END=38218639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr1 38218640 . G . PASS END=38218657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 38218658 . C . LowGQ END=38218773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 38218774 . G . PASS END=38218829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 38218830 . A . LowGQ END=38218830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,86:24,0,110:4,0 chr1 38218831 . G . PASS END=38218835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 38218836 . G . PASS END=38218846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 38218847 . A . PASS END=38218847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 38218848 . G . PASS END=38218848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr1 38218849 . C . PASS END=38218849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 38218850 . G . PASS END=38218853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 38218854 . A . PASS END=38218854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 38218855 . G . PASS END=38218879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:8,0 chr1 38218880 . C . PASS END=38218880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 38218881 . G . PASS END=38218893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 38218894 . C . PASS END=38218894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 38218895 . G . PASS END=38218898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 38219887 . G . PASS END=38219895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:18,0 chr1 38219896 . A . PASS END=38219896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 38219897 . A . PASS END=38219902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 38219903 . G . PASS END=38219919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr1 38219920 . A . PASS END=38219920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:20,0 chr1 38219921 . G . PASS END=38219963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,869:0,66,255:25,0 chr1 38219964 . T . PASS END=38219964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:25,0 chr1 38219965 . C . PASS END=38219985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:24,0 chr1 38219986 . G . PASS END=38219992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 38219993 . T . PASS END=38220013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,435:0,36,255:12,0 chr1 38220014 . G . PASS END=38220014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 38220015 . G . PASS END=38220016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 38220017 . C . PASS END=38220019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 38220020 . C . PASS END=38220020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 38220021 . T . PASS END=38220022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 38220023 . G . PASS END=38220023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 38220024 . T . PASS END=38220028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 38220029 . C . PASS END=38220029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 38220030 . C . PASS END=38220032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:8,0 chr1 38220033 . G . PASS END=38220033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 38220034 . G . PASS END=38220042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,235:8,0 chr1 38227039 . C . PASS END=38227040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 38227041 . A . PASS END=38227042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 38227043 . A . PASS END=38227043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 38227044 . C . PASS END=38227051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 38227052 . C . PASS END=38227053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 38227054 . A . PASS END=38227054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 38227055 . C . PASS END=38227085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:13,0 chr1 38227086 . A . PASS END=38227093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 38227094 . C . PASS END=38227119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 38227120 . G . PASS END=38227120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:10,0 chr1 38227121 . C . PASS END=38227145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,380:0,33,255:11,0 chr1 38227146 . C . PASS END=38227146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 38227147 . G . PASS END=38227151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 38227152 . C . PASS END=38227224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 38227225 . C . PASS END=38227229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 38227230 . G . PASS END=38227257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 38227258 . G . PASS END=38227261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 38227262 . G . LowGQ END=38227262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 38227263 . G . PASS END=38227265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 38227266 . A . PASS END=38227293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 38227294 . G . PASS END=38227294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 38227295 . C . PASS END=38227302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 38227303 . G . PASS END=38227303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 38227304 . T . PASS END=38227321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 38227322 . A . PASS END=38227322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:9,0 chr1 38227323 . C . PASS END=38227365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr1 38227366 . A . PASS END=38227366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 38227367 . C . PASS END=38227372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 38227373 . C . PASS END=38227373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 38227374 . G . PASS END=38227380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 38227381 . C . PASS END=38227381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 38227382 . G . PASS END=38227384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38227385 . C . PASS END=38227392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 38227393 . G . PASS END=38227393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr1 38227394 . C . PASS END=38227419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,413:0,39,255:13,0 chr1 38227420 . G . PASS END=38227431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 38227432 . G . PASS END=38227432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 38227433 . T . PASS END=38227433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38227434 . C . PASS END=38227434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 38227435 . G . PASS END=38227439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 38227440 . G . PASS END=38227440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:10,0 chr1 38227441 . C . PASS END=38227441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 38227442 . G . PASS END=38227444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 38227445 . A . PASS END=38227445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 38227446 . A . PASS END=38227448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 38227449 . T . PASS END=38227449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,421:0,6,255:13,0 chr1 38227450 . C . PASS END=38227471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr1 38227472 . A . PASS END=38227477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 38227478 . C . PASS END=38227491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 38227492 . G . PASS END=38227532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:17,0 chr1 38227533 . C . PASS END=38227533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 38227534 . C . PASS END=38227603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,576:0,51,255:19,0 chr1 38227604 . G . PASS END=38227625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 38227626 . T . PASS END=38227626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 38227627 . G . PASS END=38227627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 38227628 . C . PASS END=38227662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr1 38227663 . C . PASS END=38227667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 38227668 . A . PASS END=38227668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 38227669 . G . PASS END=38227698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 38227699 . C . PASS END=38227745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 38227746 . T . PASS END=38227753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 38227754 . C . PASS END=38227755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38228457 . C . PASS END=38228521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:36:0,92,1310:0,92,255:40,0 chr1 38230633 . C . PASS END=38230681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 38230682 . G . PASS END=38230701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 38230702 . A . PASS END=38230702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 38230703 . G . PASS END=38230727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr1 38230728 . C . PASS END=38230737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:17,0 chr1 38230738 . T . PASS END=38230738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 38259855 . A . PASS END=38259889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 38259890 . G . PASS END=38259896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 38259897 . G . PASS END=38259928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 38259929 . T . PASS END=38259983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr1 38259984 . C . PASS END=38259996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 38259997 . A . PASS END=38260000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 38260001 . A . PASS END=38260006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 38260007 . A . PASS END=38260007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:6,0 chr1 38260008 . G . PASS END=38260008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 38260009 . A . PASS END=38260024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:13:6:0,13,225:0,13,225:6,0 chr1 38260025 . C . LowDepth;LowGQ END=38260101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 38260102 . C . PASS END=38260103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 38260104 . C . PASS END=38260104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 38260105 . C . PASS END=38260106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 38260107 . G . PASS END=38260110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 38260111 . C . PASS END=38260111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 38260112 . G . PASS END=38260113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 38260114 . C . LowGQ END=38260115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,200:7,0,209:7,0 chr1 38260116 . C . PASS END=38260117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 38260118 . C . PASS END=38260119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 38260120 . C . LowGQ END=38260120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr1 38260121 . G . PASS END=38260122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 38260123 . A . PASS END=38260123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 38260124 . G . PASS END=38260124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 38260125 . G . LowGQ END=38260126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,296:6,0,255:10,0 chr1 38260127 . C . PASS END=38260127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 38260128 . G . LowGQ END=38260130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,279:6,0,255:10,0 chr1 38260131 . C . PASS END=38260139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr1 38260140 . G . PASS END=38260152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,607:0,48,255:17,0 chr1 38260153 . G . PASS END=38260153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 38260154 . C . PASS END=38260155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 38260156 . T . PASS END=38260156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 38260157 . C . PASS END=38260162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 38260163 . G . PASS END=38260163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 38260164 . G . PASS END=38260220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:18,0 chr1 38260221 . A . PASS END=38260221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 38260222 . T . PASS END=38260227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 38260228 . G . PASS END=38260256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 38260257 . C . PASS END=38260262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 38260263 . A . PASS END=38260263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 38260264 . T . PASS END=38260267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38260268 . G . PASS END=38260268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,455:0,26,255:12,0 chr1 38260269 . G . PASS END=38260272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38260273 . G . PASS END=38260277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 38260278 . C . PASS END=38260281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 38260282 . G . PASS END=38260282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 38260283 . C . PASS END=38260286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 38260287 . C . PASS END=38260295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 38260296 . C . PASS END=38260296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 38260297 . C . PASS END=38260353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,550:0,45,255:17,0 chr1 38260354 . A . PASS END=38260354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 38260355 . C . PASS END=38260374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 38260375 . A . PASS END=38260381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 38260382 . C . PASS END=38260401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:8:0,21,315:0,24,255:10,0 chr1 38260402 . T . PASS END=38260404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 38261409 . G . PASS END=38261411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 38261412 . T . PASS END=38261415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 38261416 . G . PASS END=38261416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 38261417 . G . PASS END=38261512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1196:0,82,255:38,0 chr1 38261513 . A . PASS END=38261518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 38262416 . G . PASS END=38262492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1244:0,92,255:40,0 chr1 38265239 . G . PASS END=38265248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 38265249 . C . PASS END=38265249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 38265250 . A . PASS END=38265250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 38265251 . T . PASS END=38265251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 38265252 . G . PASS END=38265288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr1 38265289 . G . PASS END=38265289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38265290 . C . PASS END=38265298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 38265299 . C . PASS END=38265301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 38265302 . T . PASS END=38265302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 38265303 . T . PASS END=38265444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1055:0,84,255:40,0 chr1 38265445 . T . PASS END=38265445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1355:0,62,255:35,0 chr1 38265446 . G . PASS END=38265478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1081:0,82,255:36,0 chr1 38265479 . T . PASS END=38265479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:29:30:0,29,1008:0,29,255:28,0 chr1 38265480 . G . PASS END=38265482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 38265483 . T . PASS END=38265483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 38265484 . C . PASS END=38265498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 38265499 . T . PASS END=38265499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 38265500 . T . PASS END=38265501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 38265502 . G . PASS END=38265502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 38265503 . T . PASS END=38265513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1135:0,93,255:31,0 chr1 38265514 . A . PASS END=38265514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 38265515 . G . PASS END=38265537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:33,0 chr1 38265538 . T . PASS END=38265538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1050:0,71,255:30,0 chr1 38265539 . T . PASS END=38265638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1174:0,86,255:38,0 chr1 38265639 . A . PASS END=38265639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 38265640 . A . PASS END=38265643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1163:0,80,255:28,0 chr1 38265644 . C . PASS END=38265646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 38265647 . G . PASS END=38265657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,83,255:29,0 chr1 38265658 . C . PASS END=38265660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1100:0,74,255:26,0 chr1 38265661 . C . PASS END=38265662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 38265663 . C . PASS END=38265663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr1 38265664 . T . PASS END=38265667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 38265668 . G . PASS END=38265668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 38265669 . G . PASS END=38265669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 38265670 . C . PASS END=38265695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 38265696 . G . PASS END=38265696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 38265697 . T . PASS END=38265701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 38265702 . A . PASS END=38265703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38265704 . T . PASS END=38265704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 38265705 . A . PASS END=38265706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38265707 . C . PASS END=38265708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 38265709 . C . PASS END=38265714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 38265715 . A . PASS END=38265721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 38265722 . G . PASS END=38265735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:30,0 chr1 38265736 . A . PASS END=38265736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 38265737 . G . PASS END=38265866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1066:0,82,255:40,0 chr1 38265867 . C . PASS END=38265867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:24,0 chr1 38265868 . T . PASS END=38265875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:28:0,75,1125:0,77,255:26,0 chr1 38269597 . T . PASS END=38269669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,112,1800:0,112,255:40,1 chr1 38269974 . C . PASS END=38269991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1111:0,90,255:30,0 chr1 38269992 . C . PASS END=38269992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 38269993 . C . PASS END=38269994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 38269995 . A . PASS END=38269995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr1 38269996 . A . PASS END=38270015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1072:0,90,255:31,0 chr1 38270016 . T . PASS END=38270016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 38270017 . C . PASS END=38270039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1170:0,83,255:32,0 chr1 38270040 . C . PASS END=38270040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:29,0 chr1 38270041 . A . PASS END=38270064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:32,0 chr1 38270065 . T . PASS END=38270065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 38270066 . T . PASS END=38270066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 38270067 . T . PASS END=38270067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1007:0,60,255:27,0 chr1 38270068 . G . PASS END=38270068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 38270069 . T . PASS END=38270069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 38270070 . C . PASS END=38270079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 38270080 . T . PASS END=38270093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,857:0,67,255:25,0 chr1 38270094 . T . PASS END=38270116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:19:0,44,698:0,44,255:18,0 chr1 38272529 . C . PASS END=38272648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,99,1637:0,99,255:40,0 chr1 38272773 . A . PASS END=38272785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1241:0,89,255:34,0 chr1 38272786 . T . PASS END=38272786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1091:0,55,255:33,0 chr1 38272787 . T . PASS END=38272861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1266:0,84,255:40,0 chr1 38272862 . C . PASS END=38272863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1371:0,62,255:29,0 chr1 38272864 . T . PASS END=38272868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1260:0,81,255:29,0 chr1 38272869 . T . PASS END=38272880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:27:0,66,1035:0,66,255:25,0 chr1 38272881 . G . PASS END=38272881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:23,0 chr1 38272882 . C . PASS END=38272887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:23,0 chr1 38273464 . C . PASS END=38273495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,288:0,27,255:9,0 chr1 38273496 . G . PASS END=38273502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 38273503 . G . PASS END=38273503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 38273504 . G . PASS END=38273514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 38273515 . C . PASS END=38273536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 38273537 . C . PASS END=38273582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 38273583 . C . LowDepth;LowGQ END=38273694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 38273695 . C . PASS END=38273731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 38273732 . C . PASS END=38273735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 38273736 . A . PASS END=38273736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 38273737 . G . PASS END=38273777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 38273778 . A . PASS END=38273827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr1 38273828 . C . PASS END=38273838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 38273839 . C . PASS END=38273848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 38273849 . A . PASS END=38273849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 38273850 . C . PASS END=38273852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 38274077 . A . PASS END=38274077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 38274078 . T . PASS END=38274080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,537:0,48,255:16,0 chr1 38274081 . A . PASS END=38274081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 38274082 . A . PASS END=38274088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 38274089 . C . PASS END=38274091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,28,255:9,0 chr1 38274092 . G . PASS END=38274106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,382:0,33,255:11,0 chr1 38274107 . C . PASS END=38274108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 38274109 . G . PASS END=38274109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 38274110 . G . PASS END=38274110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 38274111 . G . PASS END=38274111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 38274203 . G . PASS END=38274225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,553:0,48,255:16,0 chr1 38274226 . G . PASS END=38274226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr1 38274227 . G . PASS END=38274231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 38274232 . C . PASS END=38274233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38274234 . G . PASS END=38274241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38274242 . G . PASS END=38274244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38274245 . C . PASS END=38274245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 38274246 . G . PASS END=38274256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 38274257 . A . PASS END=38274263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:11:0,26,405:0,26,255:9,0 chr1 38274264 . C . PASS END=38274267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 38274268 . C . PASS END=38274284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,296:0,27,255:9,0 chr1 38274285 . G . PASS END=38274287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:11:9:0,11,294:0,11,255:10,0 chr1 38274288 . C . PASS END=38274288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 38274289 . A . PASS END=38274290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,288:0,16,255:10,0 chr1 38274291 . C . PASS END=38274291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,380:0,33,255:11,0 chr1 38274292 . A . LowGQ END=38274292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,286:0,0,255:9,0 chr1 38274293 . G . PASS END=38274295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:12,0 chr1 38274296 . G . PASS END=38274296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 38274297 . C . PASS END=38274297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,324:0,3,255:10,0 chr1 38274298 . T . PASS END=38274300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:12,0 chr1 38274301 . A . PASS END=38274301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,321:0,5,255:11,0 chr1 38274302 . C . PASS END=38274303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 38274304 . C . PASS END=38274304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 38274305 . G . PASS END=38274305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 38274306 . G . PASS END=38274309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38274310 . A . PASS END=38274310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 38274311 . G . PASS END=38274315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 38274316 . G . PASS END=38274317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 38274318 . C . PASS END=38274318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,402:0,8,255:11,0 chr1 38274319 . A . PASS END=38274321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 38274322 . G . PASS END=38274322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 38274323 . G . PASS END=38274323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 38274324 . C . LowGQ END=38274324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,344:0,0,255:11,0 chr1 38274325 . A . PASS END=38274326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 38274327 . C . PASS END=38274327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr1 38274328 . T . LowGQ END=38274328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:27,0,255:12,0 chr1 38274329 . C . PASS END=38274329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 38274330 . C . PASS END=38274344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 38274345 . G . PASS END=38274345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 38274346 . C . PASS END=38274347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 38274348 . T . PASS END=38274348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 38274349 . G . PASS END=38274351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:16,0 chr1 38274352 . A . PASS END=38274352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 38274353 . G . PASS END=38274354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 38274355 . A . PASS END=38274355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 38274356 . G . PASS END=38274393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,637:0,40,255:19,0 chr1 38274394 . C . PASS END=38274394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 38274395 . T . PASS END=38274395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 38274396 . G . PASS END=38274400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 38274401 . C . PASS END=38274401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 38274402 . G . PASS END=38274402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 38274403 . G . PASS END=38274404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 38274650 . A . PASS END=38274687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,898:0,84,255:31,0 chr1 38274688 . T . PASS END=38274688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1032:0,79,255:29,0 chr1 38274689 . G . PASS END=38274711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,992:0,81,255:29,0 chr1 38274712 . A . PASS END=38274712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 38274713 . A . PASS END=38274714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 38274715 . G . PASS END=38274736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 38274737 . G . PASS END=38274745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:23:0,48,720:0,69,255:19,0 chr1 38280808 . T . PASS END=38280830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:26,0 chr1 38280831 . G . PASS END=38280924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1155:0,90,255:38,0 chr1 38280925 . C . PASS END=38280957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,67,255:26,0 chr1 38280958 . A . PASS END=38280958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38280959 . G . PASS END=38280962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 38280963 . T . PASS END=38280963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,925:0,54,255:25,0 chr1 38280964 . C . PASS END=38280981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 38280982 . C . PASS END=38281002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 38281003 . A . PASS END=38281003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 38281004 . G . PASS END=38281010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:28,0 chr1 38281011 . A . PASS END=38281012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 38281013 . G . PASS END=38281018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,995:0,84,255:29,0 chr1 38281019 . G . PASS END=38281019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 38281020 . G . PASS END=38281025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 38281026 . G . PASS END=38281026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 38281027 . G . PASS END=38281037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 38281038 . A . PASS END=38281038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 38281039 . A . PASS END=38281051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 38281052 . A . PASS END=38281052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 38281053 . G . PASS END=38281056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 38281057 . C . PASS END=38281058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 38281059 . G . PASS END=38281069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 38281070 . T . PASS END=38281070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 38281071 . C . PASS END=38281077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1147:0,90,255:30,0 chr1 38281078 . C . PASS END=38281078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:28,0 chr1 38281079 . T . PASS END=38281082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 38281083 . G . PASS END=38281083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 38281084 . G . PASS END=38281096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1103:0,82,255:31,0 chr1 38281097 . G . PASS END=38281100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,89,255:26,0 chr1 38281101 . G . PASS END=38281101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:27,0 chr1 38281102 . T . PASS END=38281102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:25,0 chr1 38281103 . G . PASS END=38281110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1088:0,90,255:30,0 chr1 38281111 . G . PASS END=38281111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 38281112 . C . PASS END=38281121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 38281122 . T . PASS END=38281122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:27,0 chr1 38281123 . C . PASS END=38281123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38281124 . C . PASS END=38281124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 38281125 . T . PASS END=38281126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38281127 . C . PASS END=38281130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 38281131 . A . PASS END=38281131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:24,0 chr1 38281132 . T . PASS END=38281139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 38281140 . C . PASS END=38281142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:27,0 chr1 38281143 . T . PASS END=38281143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 38281144 . T . PASS END=38281158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,958:0,84,255:31,0 chr1 38281159 . T . PASS END=38281159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 38281160 . G . PASS END=38281199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1091:0,80,255:33,0 chr1 38281200 . T . PASS END=38281200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:28,0 chr1 38281201 . C . PASS END=38281219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:30,0 chr1 38281220 . A . PASS END=38281236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:26,0 chr1 38281237 . C . PASS END=38281238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 38283091 . C . PASS END=38283154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,120,1800:0,132,255:40,0 chr1 38283750 . T . PASS END=38283770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,180,255:40,0 chr1 38287793 . A . PASS END=38287795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 38287796 . T . PASS END=38287796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 38287797 . T . PASS END=38287797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 38287798 . G . PASS END=38287798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 38287799 . T . PASS END=38287801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:29,0 chr1 38287802 . T . PASS END=38287803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 38287804 . G . PASS END=38287804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 38287805 . G . PASS END=38287806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 38287807 . T . PASS END=38287808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,957:0,87,255:29,0 chr1 38287809 . T . PASS END=38287809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 38287810 . G . PASS END=38287814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:33,0 chr1 38287815 . G . PASS END=38287816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,970:0,63,255:33,0 chr1 38287817 . A . PASS END=38287824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1229:0,102,255:34,0 chr1 38287825 . C . PASS END=38287825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 38287826 . A . PASS END=38287827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr1 38287828 . C . PASS END=38287828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1169:0,47,255:32,0 chr1 38287829 . A . PASS END=38287937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1169:0,80,255:40,0 chr1 38287938 . T . PASS END=38287938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1017:0,66,255:27,0 chr1 38287939 . T . PASS END=38287939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1008:0,46,255:25,0 chr1 38287940 . G . PASS END=38287950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 38287951 . G . PASS END=38287951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 38287952 . C . PASS END=38287952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38287953 . A . PASS END=38287974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:25,0 chr1 38287975 . G . PASS END=38287978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 38287979 . C . PASS END=38287982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:23,0 chr1 38287983 . G . PASS END=38287983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:22,0 chr1 38287984 . T . PASS END=38287995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 38287996 . G . PASS END=38287996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 38287997 . T . PASS END=38287997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 38287998 . G . PASS END=38287998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 38287999 . G . PASS END=38288005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 38288006 . T . PASS END=38288007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 38288008 . C . PASS END=38288012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 38288013 . A . PASS END=38288020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 38288021 . T . PASS END=38288028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 38288029 . C . PASS END=38288064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,654:0,41,255:19,0 chr1 38288065 . G . PASS END=38288075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 38288076 . A . PASS END=38288076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:19,0 chr1 38288077 . T . PASS END=38288080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 38288081 . C . PASS END=38288081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 38288082 . T . PASS END=38288083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 38288084 . C . PASS END=38288087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 38288088 . G . PASS END=38288123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr1 38288124 . G . PASS END=38288124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38288125 . C . PASS END=38288135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,859:0,70,255:26,0 chr1 38288136 . C . PASS END=38288136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:20,0 chr1 38288137 . T . PASS END=38288149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,922:0,62,255:22,0 chr1 38288150 . C . PASS END=38288151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 38288152 . C . PASS END=38288160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 38288161 . G . PASS END=38288161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 38288162 . T . PASS END=38288162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 38288163 . T . PASS END=38288163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 38288164 . G . PASS END=38288164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 38288165 . T . PASS END=38288165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:26,0 chr1 38288166 . A . PASS END=38288168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 38288169 . A . PASS END=38288170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:28:0,45,893:0,45,255:28,0 chr1 38288171 . A . PASS END=38288171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 38288172 . G . PASS END=38288173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 38288174 . A . PASS END=38288174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:27,0 chr1 38288175 . G . PASS END=38288176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 38288177 . G . PASS END=38288205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:30,0 chr1 38288206 . C . PASS END=38288206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 38288207 . A . PASS END=38288207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38288208 . G . PASS END=38288208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 38288209 . G . PASS END=38288217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 38288218 . A . PASS END=38288218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 38288219 . G . PASS END=38288223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38288224 . C . PASS END=38288224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 38288225 . A . PASS END=38288229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38288230 . G . PASS END=38288236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 38288237 . A . PASS END=38288351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:37,0 chr1 38288352 . G . PASS END=38288358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 38288359 . C . PASS END=38288361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38288362 . C . PASS END=38288382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 38288383 . A . PASS END=38288387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 38288388 . G . PASS END=38288388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 38289382 . C . PASS END=38289484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,111,1665:0,141,255:40,0 chr1 38297917 . C . PASS END=38297994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,114,1710:0,137,255:40,0 chr1 38300751 . C . PASS END=38300887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,105,1575:0,117,255:40,0 chr1 38301343 . C . PASS END=38301416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,139,255:40,0 chr1 38304297 . C . PASS END=38304426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:39:0,84,1260:0,93,255:40,0 chr1 38304427 . G . PASS END=38304428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:37:0,78,1170:0,98,255:26,0 chr1 38305592 . C . PASS END=38305602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr1 38305603 . G . PASS END=38305603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 38305604 . T . PASS END=38305615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:26,0 chr1 38305616 . T . PASS END=38305768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1241:0,81,255:39,0 chr1 38305769 . A . PASS END=38305769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 38305770 . G . PASS END=38305774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 38305775 . C . PASS END=38305788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 38305789 . G . PASS END=38305814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,668:0,50,255:18,0 chr1 38305815 . A . PASS END=38305815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 38305816 . T . PASS END=38305818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 38305819 . G . PASS END=38305830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr1 38322923 . T . PASS END=38322925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:24,0 chr1 38322926 . T . PASS END=38322926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 38322927 . T . PASS END=38322933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:24,0 chr1 38322934 . T . PASS END=38322934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 38322935 . T . PASS END=38322944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,868:0,72,255:24,0 chr1 38322945 . C . PASS END=38322973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:28:0,83,1041:0,83,255:36,0 chr1 38322974 . T . PASS END=38322974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:33,0 chr1 38322975 . T . PASS END=38322981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1316:0,92,255:34,0 chr1 38322982 . T . PASS END=38322982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:32,0 chr1 38322983 . T . PASS END=38322984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,102,1530:0,105,255:34,0 chr1 38322985 . T . PASS END=38322985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:32,0 chr1 38322986 . T . PASS END=38323330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:34:0,86,1167:0,86,255:40,0 chr1 38327987 . T . PASS END=38328100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,99,1496:0,99,255:40,0 chr1 38328101 . A . PASS END=38328101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1528:0,63,255:39,0 chr1 38328102 . G . PASS END=38328102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1568:0,93,255:40,0 chr1 38329984 . C . PASS END=38330095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,114,1710:0,134,255:40,0 chr1 38331433 . C . PASS END=38331451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 38331452 . T . PASS END=38331453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 38331454 . G . PASS END=38331457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 38331458 . G . PASS END=38331458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 38331459 . A . PASS END=38331471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:25,0 chr1 38331472 . G . PASS END=38331478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 38331479 . T . PASS END=38331479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 38331480 . A . PASS END=38331494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,995:0,84,255:31,0 chr1 38331495 . T . PASS END=38331495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 38331496 . G . PASS END=38331539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:32,0 chr1 38331540 . C . PASS END=38331560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,990:0,65,255:26,0 chr1 38332131 . A . PASS END=38332215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:52:0,120,1800:0,138,255:40,0 chr1 38332264 . T . PASS END=38332434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:84:42:0,84,1260:0,113,255:40,0 chr1 38334173 . C . PASS END=38334173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr1 38334174 . T . PASS END=38334286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:31:0,87,1280:0,93,255:40,0 chr1 38335546 . T . PASS END=38335572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,103,1322:0,103,255:40,0 chr1 38338602 . C . PASS END=38338628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:25,0 chr1 38338629 . G . PASS END=38338809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:28:0,81,1019:0,84,255:40,0 chr1 38338810 . A . PASS END=38338810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1278:0,64,255:29,0 chr1 38338811 . G . PASS END=38338834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1071:0,82,255:32,0 chr1 38338835 . A . PASS END=38338835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 38338836 . A . PASS END=38338837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 38339665 . C . PASS END=38339784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1133:0,80,255:40,0 chr1 38339785 . A . PASS END=38339785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr1 38339786 . T . PASS END=38339817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:36,0 chr1 38339818 . G . PASS END=38339827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr1 38341278 . C . PASS END=38341385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1166:0,93,255:40,0 chr1 38341386 . C . PASS END=38341388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 38343860 . C . PASS END=38343865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 38343866 . G . PASS END=38343931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,808:0,66,255:25,0 chr1 38343932 . C . PASS END=38343932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 38343933 . T . PASS END=38343957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,854:0,69,255:24,0 chr1 38343958 . G . PASS END=38343958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 38343959 . A . PASS END=38343965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 38343966 . T . PASS END=38343990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 38343991 . T . PASS END=38343991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 38343992 . C . PASS END=38343993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 38343994 . C . PASS END=38343994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 38343995 . A . PASS END=38343995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 38345757 . C . PASS END=38345843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:32:0,86,1241:0,86,255:40,0 chr1 38345844 . T . PASS END=38345866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,92,255:35,0 chr1 38348479 . C . PASS END=38348590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,108,1620:0,132,255:40,0 chr1 38351310 . T . PASS END=38351396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:33:0,92,1260:0,92,255:40,0 chr1 38351397 . C . PASS END=38351397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,6:52:42:52:0,42,1428:0,42,255:40,0 chr1 38351398 . T . PASS END=38351468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1215:0,83,255:40,0 chr1 38351469 . A . PASS END=38351490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,64,255:26,0 chr1 38351491 . T . PASS END=38351491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 38351492 . G . PASS END=38351497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 38352560 . C . PASS END=38352662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:31:0,83,1170:0,83,255:40,0 chr1 38352663 . C . PASS END=38352676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 38353023 . C . PASS END=38353137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:36:0,91,1250:0,91,255:40,0 chr1 38353915 . C . PASS END=38354016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,112,1800:0,112,255:40,0 chr1 38355229 . C . PASS END=38355250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:36:0,97,1222:0,97,255:40,0 chr1 38355251 . A . PASS END=38355251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:65:42:0,65,1459:0,65,255:39,0 chr1 38355252 . A . PASS END=38355255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 38355256 . T . PASS END=38355256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1443:0,79,255:40,0 chr1 38355257 . C . PASS END=38355396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,87,255:40,0 chr1 38357030 . C . PASS END=38357126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1305:0,99,255:40,0 chr1 38397157 . T . PASS END=38397189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,607:0,51,255:19,0 chr1 38397190 . C . PASS END=38397198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 38397199 . T . PASS END=38397199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 38397200 . G . PASS END=38397203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 38397204 . C . PASS END=38397205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 38397206 . G . PASS END=38397210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 38397211 . C . PASS END=38397211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:20,0 chr1 38397212 . A . PASS END=38397229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:24,0 chr1 38397230 . T . PASS END=38397230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 38397231 . G . PASS END=38397238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 38397239 . C . PASS END=38397239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 38397240 . C . PASS END=38397270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 38397271 . T . PASS END=38397271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 38397272 . G . PASS END=38397273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 38397274 . C . PASS END=38397276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr1 38397277 . C . PASS END=38397283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 38397284 . G . PASS END=38397342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,607:0,40,255:19,0 chr1 38397343 . A . PASS END=38397350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 38397351 . T . PASS END=38397351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,421:0,15,255:9,0 chr1 38397352 . G . PASS END=38397366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:11,0 chr1 38397367 . G . PASS END=38397367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 38397368 . C . PASS END=38397415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:12,0 chr1 38397416 . C . PASS END=38397416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr1 38397417 . G . PASS END=38397455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 38397456 . C . PASS END=38397456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr1 38397457 . C . PASS END=38397458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 38397459 . C . PASS END=38397459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 38397460 . G . PASS END=38397461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 38397462 . G . PASS END=38397462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,1 chr1 38397463 . T . PASS END=38397463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:4:13:0,4,400:0,4,255:11,1 chr1 38397464 . G . PASS END=38397464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 38397465 . C . PASS END=38397467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 38397468 . G . PASS END=38397468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:10,0 chr1 38397469 . C . PASS END=38397476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 38397477 . A . PASS END=38397477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:11,0 chr1 38397478 . T . PASS END=38397485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 38397486 . C . PASS END=38397486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 38397487 . T . PASS END=38397489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 38397490 . C . PASS END=38397496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 38397497 . A . PASS END=38397497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 38397498 . T . PASS END=38397512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 38397513 . A . LowGQ END=38397513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:7,0 chr1 38397514 . C . PASS END=38397518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,282:0,24,255:9,0 chr1 38397519 . C . PASS END=38397519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 38397520 . G . PASS END=38397520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 38397521 . G . PASS END=38397528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:11,0 chr1 38397529 . C . PASS END=38397529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 38397530 . C . PASS END=38397531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 38397532 . C . PASS END=38397535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 38397536 . G . PASS END=38397546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr1 38397547 . C . PASS END=38397557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr1 38397558 . A . PASS END=38397558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 38397559 . C . PASS END=38397570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 38397571 . G . PASS END=38397574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 38397575 . G . PASS END=38397586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:14,0 chr1 38397587 . C . PASS END=38397588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38397589 . G . PASS END=38397589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 38397590 . C . PASS END=38397604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:18,0 chr1 38397605 . C . PASS END=38397605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 38397606 . C . PASS END=38397633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 38397634 . A . PASS END=38397639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 38397640 . C . PASS END=38397662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,631:0,43,255:18,0 chr1 38397663 . G . PASS END=38397663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 38397664 . C . PASS END=38397674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 38397675 . T . PASS END=38397675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,596:0,27,255:14,0 chr1 38397676 . A . PASS END=38397677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:16,0 chr1 38397678 . A . PASS END=38397678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,576:0,26,255:15,0 chr1 38397679 . C . PASS END=38397694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:15:0,40,574:0,40,255:16,0 chr1 38397695 . A . PASS END=38397695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:14,0 chr1 38397696 . A . PASS END=38397715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 38397716 . G . PASS END=38397716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 38397717 . A . PASS END=38397718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 38397719 . T . PASS END=38397719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 38397720 . C . PASS END=38397721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 38397722 . A . PASS END=38397724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 38397725 . C . PASS END=38397725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 38406360 . C . PASS END=38406470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:38:0,93,1395:0,104,255:40,0 chr1 38407755 . C . PASS END=38407803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:32:0,93,1209:0,96,255:40,0 chr1 38407804 . A . PASS END=38407804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 38407805 . G . PASS END=38407816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr1 38407817 . T . PASS END=38407817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:28,0 chr1 38407818 . T . PASS END=38407823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 38407824 . C . PASS END=38407824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 38407825 . G . PASS END=38407825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 38407826 . G . PASS END=38407839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:26,0 chr1 38409312 . C . PASS END=38409341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1155:0,102,255:36,0 chr1 38409468 . C . PASS END=38409565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1282:0,93,255:40,0 chr1 38411428 . G . PASS END=38411434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 38411435 . C . PASS END=38411435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,665:0,8,255:19,0 chr1 38411436 . C . PASS END=38411468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:26,0 chr1 38411469 . T . PASS END=38411485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 38411486 . G . PASS END=38411502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:25,0 chr1 38411503 . C . PASS END=38411503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 38411504 . A . PASS END=38411504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 38411505 . C . PASS END=38411505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 38411506 . A . PASS END=38411506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 38411507 . G . PASS END=38411507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr1 38411508 . C . PASS END=38411508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 38411509 . A . PASS END=38411522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,698:0,44,255:19,0 chr1 38411924 . G . PASS END=38411932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 38411933 . G . PASS END=38411936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 38411937 . T . PASS END=38411939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 38411940 . C . PASS END=38411957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,943:0,84,255:29,0 chr1 38411958 . T . PASS END=38411958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 38411959 . G . PASS END=38411968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1096:0,87,255:30,0 chr1 38411969 . A . PASS END=38411969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 38411970 . G . PASS END=38411975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1155:0,90,255:30,0 chr1 38411976 . T . PASS END=38412002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,77,255:26,0 chr1 38412003 . C . PASS END=38412006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:18,0 chr1 38412446 . T . PASS END=38412451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38423858 . C . PASS END=38423890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,170,255:40,0 chr1 38423891 . T . PASS END=38423935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,190,255:40,0 chr1 38425792 . C . PASS END=38425847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,146,255:40,0 chr1 38433716 . A . PASS END=38433727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,868:0,61,255:26,0 chr1 38433728 . C . PASS END=38433746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:30,0 chr1 38433747 . A . PASS END=38433747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1033:0,24,255:29,0 chr1 38433748 . G . PASS END=38433757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1146:0,80,255:32,0 chr1 38433758 . C . PASS END=38433759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 38433760 . G . PASS END=38433768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:29,0 chr1 38433769 . A . PASS END=38433803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:29,0 chr1 38433804 . T . PASS END=38433805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 38433806 . C . PASS END=38433806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 38435026 . A . PASS END=38435040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:39:0,107,1459:0,107,255:40,0 chr1 38435041 . G . PASS END=38435041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1541:0,77,255:40,0 chr1 38435042 . A . PASS END=38435136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:41:0,93,1353:0,93,255:40,0 chr1 38435243 . T . PASS END=38435403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:93:40:0,93,1395:0,104,255:40,0 chr1 38435404 . G . PASS END=38435407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:38:0,60,900:0,89,255:21,0 chr1 38442556 . C . PASS END=38442584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,134,255:40,0 chr1 38442585 . G . PASS END=38442625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,114,1767:0,114,255:40,0 chr1 38444392 . C . PASS END=38444392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 38444393 . G . PASS END=38444393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr1 38444394 . C . PASS END=38444499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:36:0,96,1252:0,96,255:40,0 chr1 38444660 . C . PASS END=38444690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,101,1482:0,101,255:40,0 chr1 38444691 . C . PASS END=38444691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1582:0,58,255:40,0 chr1 38444692 . A . PASS END=38444711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,102,1530:0,116,255:40,0 chr1 38444712 . C . PASS END=38444727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,91,255:34,0 chr1 38445137 . C . PASS END=38445205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:34:0,95,1236:0,95,255:40,0 chr1 38446258 . C . PASS END=38446371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:40:0,82,1350:0,82,255:40,0 chr1 38446372 . G . PASS END=38446372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1333:0,65,255:31,0 chr1 38446373 . T . PASS END=38446373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 38446374 . A . PASS END=38446374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:31,0 chr1 38446375 . C . PASS END=38446378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr1 38446379 . A . PASS END=38446392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:29:0,63,945:0,71,255:25,0 chr1 38446393 . G . PASS END=38446396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,765:0,48,255:19,0 chr1 38447401 . C . PASS END=38447483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,116,1604:0,116,255:40,0 chr1 38449841 . C . PASS END=38449872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,114,1656:0,114,255:40,0 chr1 38449873 . A . PASS END=38449909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,117,1755:0,132,255:40,0 chr1 38449910 . T C, 178.03 PASS DP=44;MQ=246.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,24,0:0,20,0:128:216,131,0,316,316,316:255,132,0:0,0:1.7803e+02,1.2803e+02,0.0000e+00,3.1280e+02,3.4757e+02,3.1581e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,26:0,0,26,18 chr1 38449911 . T . PASS END=38449932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:37:0,87,1305:0,87,255:39,0 chr1 38450379 . T . PASS END=38450404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:45:0,91,1521:0,91,255:40,0 chr1 38450405 . C . PASS END=38450451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:40:0,90,1425:0,90,255:40,0 chr1 38453245 . C . PASS END=38453350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:53:0,120,1800:0,155,255:40,0 chr1 38453456 . C . PASS END=38453508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,184,255:40,0 chr1 38455220 . A . PASS END=38455267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:33:0,93,1344:0,99,255:39,0 chr1 38455542 . C . PASS END=38455542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38455543 . G . PASS END=38455545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 38455546 . G . PASS END=38455548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 38455549 . T . PASS END=38455549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 38455550 . T . PASS END=38455551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 38455552 . T . PASS END=38455552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 38455553 . T . PASS END=38455560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1005:0,84,255:30,0 chr1 38455561 . A . PASS END=38455562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr1 38455563 . C . PASS END=38455565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:32,0 chr1 38455566 . T . PASS END=38455567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1103:0,66,255:31,0 chr1 38455568 . T . PASS END=38455587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1170:0,83,255:34,0 chr1 38455588 . C . PASS END=38455588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1021:0,39,255:30,0 chr1 38455589 . G . PASS END=38455606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1199:0,89,255:35,0 chr1 38455607 . A . PASS END=38455607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:30,0 chr1 38455608 . G . PASS END=38455612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 38455613 . G . PASS END=38455613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:29,0 chr1 38455614 . C . PASS END=38455619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 38455620 . C . PASS END=38455626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:26,0 chr1 38455627 . A . PASS END=38455627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1040:0,54,255:24,0 chr1 38455628 . T . PASS END=38455632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,68,255:23,0 chr1 38455633 . T . PASS END=38455637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr1 38463077 . T . PASS END=38463086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:26,0 chr1 38463087 . G . PASS END=38463231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1016:0,81,255:40,0 chr1 38463356 . C . PASS END=38463374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1382:0,114,255:38,0 chr1 38463375 . G . PASS END=38463375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 38463376 . C . PASS END=38463466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,99,1358:0,99,255:40,0 chr1 38463467 . T . PASS END=38463503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,131,255:40,0 chr1 38463504 . C T, 185.44 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,24,0:0,22,0:135:223,138,0,1767,138,1767:255,138,0:0,0:1.8544e+02,1.3544e+02,0.0000e+00,4.5000e+02,1.7021e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,29:0,0,25,21 chr1 38463505 . G . PASS END=38463541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:37:0,90,1349:0,95,255:40,0 chr1 38463542 . T . PASS END=38463542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 38463635 . C . PASS END=38463658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1074:0,90,255:31,0 chr1 38463659 . A . PASS END=38463659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:31,0 chr1 38463660 . G . PASS END=38463665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 38463666 . T . PASS END=38463666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 38463667 . T . PASS END=38463733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1157:0,82,255:39,0 chr1 38463734 . C . PASS END=38463734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1270:0,45,255:35,0 chr1 38463735 . T . PASS END=38463735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:36,0 chr1 38463736 . G . PASS END=38463760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,99,255:39,0 chr1 38463761 . G . PASS END=38463771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 38463772 . A . PASS END=38463772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr1 38463773 . T . PASS END=38463785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 38463786 . T . PASS END=38463786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,815:0,45,255:22,0 chr1 38463787 . A . PASS END=38463804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 38464646 . C . PASS END=38464676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,548:0,48,255:18,0 chr1 38464677 . C . PASS END=38464683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 38464684 . G . PASS END=38464684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 38464685 . A . PASS END=38464688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 38464689 . C . PASS END=38464695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 38464696 . C . PASS END=38464724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,845:0,62,255:26,0 chr1 38464725 . G . PASS END=38464747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:30,0 chr1 38464748 . C . PASS END=38464749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 38464750 . G . PASS END=38464750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 38464751 . C . PASS END=38464751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 38464752 . T . PASS END=38464752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 38464753 . A . PASS END=38464754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:26,0 chr1 38464755 . T . PASS END=38464755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 38464756 . G . PASS END=38464756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 38464757 . A . PASS END=38464757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 38464758 . G . PASS END=38464758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 38464759 . C . PASS END=38464760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 38464761 . C . PASS END=38464761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 38464762 . T . PASS END=38464769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 38464770 . G . PASS END=38464770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 38464771 . C . PASS END=38464803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 38464804 . T . PASS END=38464806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 38464807 . T . PASS END=38464812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 38464813 . A . PASS END=38464813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 38464814 . A . PASS END=38464815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 38464816 . A . PASS END=38464820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 38464929 . C . PASS END=38465081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:34:0,90,1350:0,93,255:40,1 chr1 38465082 . C . PASS END=38465082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:28,0 chr1 38465083 . A . PASS END=38465084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:28,0 chr1 38478475 . A . PASS END=38478516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:25,0 chr1 38478517 . G . PASS END=38478517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 38478518 . A . PASS END=38478530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 38478531 . A . PASS END=38478531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 38478532 . A . PASS END=38478532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:20,0 chr1 38478533 . G . PASS END=38478533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 38478534 . C . PASS END=38478534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr1 38478535 . C . PASS END=38478537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,775:0,50,255:19,0 chr1 38482031 . C . PASS END=38482092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,158,255:40,0 chr1 38483340 . T . PASS END=38483342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,114,1793:0,114,255:40,0 chr1 38483343 . C . PASS END=38483442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:90:50:0,90,1756:0,90,255:40,0 chr1 38484136 . G . PASS END=38484230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,131,255:40,0 chr1 38484231 . G . PASS END=38484231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,8:56:21:56:0,21,1423:0,21,255:40,0 chr1 38484232 . A . PASS END=38484232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:87:53:0,87,1653:0,87,255:40,0 chr1 38484233 . G . PASS END=38484233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:59:53:0,59,1521:0,59,255:40,0 chr1 38484234 . G . PASS END=38484236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:72:52:0,72,1359:0,72,255:40,0 chr1 38484237 . T . PASS END=38484249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:50:0,86,1562:0,86,255:40,0 chr1 38484731 . A . PASS END=38484824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,145,255:40,0 chr1 38484925 . T . PASS END=38485055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:37:0,84,1297:0,84,255:40,0 chr1 38488371 . C . PASS END=38488455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:46:0,120,1800:0,128,255:40,1 chr1 38488456 . A . PASS END=38488481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:82:0,120,1800:0,177,255:40,0 chr1 38489217 . G . PASS END=38489300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:57:0,120,1800:0,137,255:40,0 chr1 38511060 . T . PASS END=38511064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 38511065 . G . PASS END=38511065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 38511066 . C . PASS END=38511066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:13,0 chr1 38511067 . A . PASS END=38511067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 38511068 . C . PASS END=38511079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,505:0,45,255:19,0 chr1 38511080 . G . PASS END=38511080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 38511081 . T . PASS END=38511102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,867:0,80,255:32,0 chr1 38511103 . A . PASS END=38511103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 38511104 . G . PASS END=38511105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 38511106 . G . PASS END=38511106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 38511107 . C . PASS END=38511133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:32,0 chr1 38511134 . A . PASS END=38511134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 38511135 . G . PASS END=38511186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1210:0,86,255:36,0 chr1 38511187 . T . PASS END=38511189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 38511190 . T . PASS END=38511190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:23,0 chr1 38511191 . C . PASS END=38511197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,70,255:24,0 chr1 38511198 . C . PASS END=38511198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 38511199 . G . PASS END=38511199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 38511200 . G . PASS END=38511200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 38511201 . G . PASS END=38511203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 38511204 . G . PASS END=38511204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 38511205 . C . PASS END=38511218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 38511219 . A . PASS END=38511230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:33:21:0,33,495:0,49,255:13,0 chr1 38511231 . C . PASS END=38511238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 38511239 . T . PASS END=38511239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 38511240 . C . PASS END=38511244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 38511245 . G . PASS END=38511245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 38511246 . C . PASS END=38511246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38511247 . C . PASS END=38511247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 38511248 . G . PASS END=38511270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 38511271 . A . PASS END=38511284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 38511285 . C . PASS END=38511303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,492:0,42,255:15,0 chr1 38511304 . C . PASS END=38511304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 38511305 . C . PASS END=38511307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 38511308 . T . PASS END=38511308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 38511309 . G . PASS END=38511312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 38511313 . T . PASS END=38511313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:15,0 chr1 38511314 . C . PASS END=38511324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:16,0 chr1 38511325 . G . PASS END=38511325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 38511326 . G . PASS END=38511328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 38511329 . T . PASS END=38511329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 38511330 . G . PASS END=38511348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,653:0,51,255:18,0 chr1 38511349 . C . PASS END=38511349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 38511350 . T . PASS END=38511370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,599:0,54,255:19,0 chr1 38511371 . C . PASS END=38511371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 38511372 . C . PASS END=38511373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 38511374 . C . PASS END=38511374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 38511375 . C . PASS END=38511400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,576:0,51,255:17,0 chr1 38511401 . T . PASS END=38511401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 38511402 . G . PASS END=38511410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 38511411 . C . PASS END=38511411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 38511412 . G . PASS END=38511425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 38511426 . C . PASS END=38511432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 38511433 . G . PASS END=38511433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 38511434 . T . PASS END=38511466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 38511467 . G . PASS END=38511467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 38511468 . C . PASS END=38511468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38511469 . C . PASS END=38511479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 38511480 . C . PASS END=38511480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 38511481 . A . PASS END=38511499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,593:0,48,255:18,0 chr1 38511500 . T . PASS END=38511500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:15,0 chr1 38511501 . G . PASS END=38511522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 38511523 . G . PASS END=38511531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 38511532 . C . PASS END=38511532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:21,0 chr1 38511533 . G . PASS END=38511534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 38511535 . C . PASS END=38511536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,866:0,59,255:21,0 chr1 38511537 . G . PASS END=38511541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 38511542 . T . PASS END=38511542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,833:0,44,255:22,0 chr1 38511543 . G . PASS END=38511546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 38511547 . T . PASS END=38511547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 38511548 . G . PASS END=38511552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 38511553 . A . PASS END=38511553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr1 38511554 . A . PASS END=38511554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 38511555 . C . PASS END=38511580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:18:0,43,645:0,43,255:19,0 chr1 38511581 . C . PASS END=38511581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 38511582 . C . PASS END=38511590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr1 38511591 . G . PASS END=38511591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 38511592 . T . PASS END=38511594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 38511595 . G . PASS END=38511596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 38511597 . C . PASS END=38511597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 38511598 . T . PASS END=38511598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 38511599 . G . PASS END=38511599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 38511600 . C . PASS END=38511600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:13,0 chr1 38511601 . G . PASS END=38511636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,592:0,44,255:17,0 chr1 38511637 . T . PASS END=38511637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 38511638 . T . PASS END=38511643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 38511644 . A . PASS END=38511644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 38511645 . C . PASS END=38511647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 38511648 . C . PASS END=38511648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 38511649 . T . PASS END=38511655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 38511656 . C . PASS END=38511669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 38511670 . G . PASS END=38511687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr1 38511688 . T . PASS END=38511719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 38511720 . C . LowDepth;LowGQ END=38512100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 38512101 . G . PASS END=38512138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 38512139 . C . PASS END=38512141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 38512142 . G . PASS END=38512146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 38512147 . A . LowGQ END=38512147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr1 38512148 . G . PASS END=38512160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 38512161 . G . PASS END=38512195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 38512196 . G . PASS END=38512205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 38512206 . G . PASS END=38512219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 38512220 . C . PASS END=38512244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 38512245 . C . PASS END=38512245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 38512246 . C . PASS END=38512258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 38512259 . T . PASS END=38512262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 38512263 . C . PASS END=38512263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 38512264 . T . PASS END=38512264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 38512265 . T . PASS END=38512271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:10,0 chr1 38512272 . T . PASS END=38512273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,205:0,13,205:9,0 chr1 38512274 . C . PASS END=38512278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 38512279 . T . LowGQ END=38512279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 38512280 . A . PASS END=38512281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 38512282 . G . PASS END=38512282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 38512283 . C . PASS END=38512283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 38512284 . G . PASS END=38512290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 38512291 . G . PASS END=38512293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 38512294 . T . PASS END=38512294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 38512295 . G . PASS END=38512299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 38512300 . C . PASS END=38512300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 38512301 . G . PASS END=38512307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 38512308 . GGCC G, 0.02 DRAGENIndelHardQUAL DP=9;MQ=226.87;FractionInformativeReads=0.778 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,0,0:0.000,0.000:7:4,0,0:3,0,0:23:0,11,58,158,158,158:0,27,255:8,0:2.3413e-02,2.2695e+01,7.2695e+01,1.9245e+02,2.0445e+02,1.9546e+02:0.00,12.00,15.01,34.77,46.77,37.78:3,4,0,0:2,5,0,0 chr1 38512309 . G . PASS END=38512331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 38512332 . C . LowGQ END=38512332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:8,0 chr1 38512333 . G . PASS END=38512333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 38512334 . C . PASS END=38512335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 38512336 . G . PASS END=38512343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:10:8:0,10,180:0,10,255:6,0 chr1 38512344 . G . LowGQ END=38512344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:7,0,247:4,0 chr1 38512345 . T . PASS END=38512345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 38512346 . G . LowGQ END=38512346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:4,0 chr1 38512347 . C . PASS END=38512349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 38512350 . A . PASS END=38512350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,255:3,0 chr1 38512351 . A . PASS END=38512352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 38512353 . C . LowGQ END=38512353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 38512354 . G . PASS END=38512354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 38512355 . G . LowGQ END=38512355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 38512356 . C . PASS END=38512370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 38512371 . T . PASS END=38512373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:4:0,3,45:0,12,133:3,0 chr1 38512374 . G A, 0.63 DRAGENSnpHardQUAL DP=5;MQ=232.09;MQRankSum=0.727;ReadPosRankSum=0.727;FractionInformativeReads=0.800;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:3,1,0:0.250,0.000:4:2,0,0:1,1,0:9:27,0,50,36,107,143:27,0,104:0,0:6.3194e-01,8.6844e+00,6.1684e+01,4.4431e+01,1.5075e+02,1.5472e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,0,1:2,1,1,0 chr1 38512375 . C . PASS END=38512411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:2,0 chr1 38512412 . C . LowDepth;LowGQ END=38512506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr1 38512560 . C . PASS END=38512567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,47:0,6,47:3,0 chr1 38512568 . C . PASS END=38512578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 38512579 . C . LowGQ END=38512579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 38512580 . C . PASS END=38512591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 38512592 . C . PASS END=38512611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 38512612 . C . PASS END=38512633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,373:0,30,255:13,0 chr1 38512634 . C . PASS END=38512636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr1 38512637 . T . PASS END=38512637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 38512638 . T . PASS END=38512681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,553:0,48,255:19,0 chr1 38512682 . C . PASS END=38512690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 38512691 . C . PASS END=38512718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:19,0 chr1 38512719 . G . PASS END=38512719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:15,0 chr1 38512720 . T . PASS END=38512741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 38512742 . G . PASS END=38512742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 38512743 . C . PASS END=38512744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 38512745 . G . PASS END=38512745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 38512746 . C . PASS END=38512761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 38512762 . G . PASS END=38512762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 38512763 . G . PASS END=38512763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 38512764 . C . PASS END=38512764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 38512765 . G . PASS END=38512767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 38512768 . G . PASS END=38512771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 38512772 . T . PASS END=38512772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 38512773 . G . PASS END=38512773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 38512774 . G . PASS END=38512793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:18,0 chr1 38512794 . C . PASS END=38512794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 38512795 . T . PASS END=38512810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,629:0,40,255:16,0 chr1 38512811 . G . PASS END=38512832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:35:13:0,35,482:0,35,255:13,0 chr1 38512833 . G . PASS END=38512833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 38512834 . G . PASS END=38512837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,466:0,39,255:13,0 chr1 38512838 . C . PASS END=38512850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 38512851 . C . PASS END=38512860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 38512861 . T . PASS END=38512868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 38512869 . G . PASS END=38512876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 38512877 . T . PASS END=38512877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 38512878 . T . PASS END=38512879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 38512880 . C . PASS END=38512880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 38512881 . C . PASS END=38512901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:11,0 chr1 38512902 . G . LowGQ END=38512902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 38512903 . C . PASS END=38512946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 38512947 . C . PASS END=38512947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 38512948 . T . PASS END=38512959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 38512960 . C . PASS END=38512960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 38512961 . C . PASS END=38512961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 38512962 . C . PASS END=38512962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr1 38512963 . T . PASS END=38512963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 38512964 . C . PASS END=38512964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 38512965 . C . PASS END=38512999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 38513000 . C . PASS END=38513000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 38513001 . G . PASS END=38513045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,178:0,15,172:5,0 chr1 38513046 . T . PASS END=38513062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:3:0,9,108:0,9,108:3,0 chr1 38513063 . G . PASS END=38513093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,139:0,12,139:5,0 chr1 38513094 . G . PASS END=38513096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 38513097 . A . PASS END=38513105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 38513106 . T . PASS END=38513106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 38513107 . G . PASS END=38513113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 38513114 . C . PASS END=38513127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:12,0 chr1 38513128 . C . PASS END=38513128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 38513129 . C . PASS END=38513136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 38513137 . T . PASS END=38513141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 38513142 . G . PASS END=38513152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 38513153 . C . PASS END=38513163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,505:0,45,255:15,0 chr1 38513164 . T . PASS END=38513164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 38513165 . C . PASS END=38513167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 38513168 . A . PASS END=38513168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 38513169 . G . PASS END=38513169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 38513170 . C . PASS END=38513243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:13,0 chr1 38513244 . A . PASS END=38513246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 38513247 . C . PASS END=38513276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 38513277 . T . PASS END=38513282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 38513283 . C . PASS END=38513286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:10:0,15,225:0,30,255:5,0 chr1 38521181 . G . PASS END=38521213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,114,1421:0,117,255:40,0 chr1 38521214 . G . PASS END=38521250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:35:0,93,1395:0,96,255:39,0 chr1 38521251 . G A, 41.98 PASS DP=35;MQ=250.00;MQRankSum=4.778;ReadPosRankSum=-0.017;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,12,0:0.343,0.000:35:9,6,0:14,6,0:42:77,0,50,400,807,1207:255,0,255:21,0:4.1981e+01,2.9692e-04,5.3000e+01,4.0024e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,15,7,5:14,9,3,9 chr1 38521252 . G . PASS END=38521256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 38521257 . T . PASS END=38521259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 39305225 . C . PASS END=39305232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1388:0,108,255:37,0 chr1 39305233 . C . PASS END=39305233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:35,0 chr1 39305234 . G . PASS END=39305366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1260:0,81,255:40,0 chr1 39305367 . T . PASS END=39305376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:23,0 chr1 39311611 . C . PASS END=39311612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1331:0,81,255:36,0 chr1 39311613 . T . PASS END=39311613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:35,0 chr1 39311614 . T . PASS END=39311759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:36:0,95,1347:0,95,255:40,0 chr1 39317287 . C . PASS END=39317429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:37:0,108,1620:0,111,255:40,0 chr1 39318046 . T . PASS END=39318160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:52:0,120,1800:0,140,255:40,0 chr1 39321380 . C . PASS END=39321579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:90:40:0,90,1350:0,103,255:40,0 chr1 39322551 . C . PASS END=39322593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1150:0,80,255:40,0 chr1 39322594 . A . PASS END=39322594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:26:42:0,26,1012:0,26,255:36,0 chr1 39322595 . T . PASS END=39322727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:33:0,82,1085:0,82,255:40,0 chr1 39322728 . G . PASS END=39322728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 39322729 . T . PASS END=39322731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr1 39322732 . G . PASS END=39322743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:27:0,60,945:0,60,255:26,0 chr1 39322744 . T . PASS END=39322754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:50:22:0,50,765:0,50,255:18,0 chr1 39325082 . C . PASS END=39325100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 39325101 . C . PASS END=39325115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 39325116 . C . PASS END=39325117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 39325118 . C . PASS END=39325118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 39325119 . A . PASS END=39325124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 39325125 . A . PASS END=39325125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 39325126 . G . PASS END=39325130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 39325131 . C . PASS END=39325131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39325132 . T . PASS END=39325143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,495:0,32,255:13,0 chr1 39325144 . T . PASS END=39325147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39325148 . A . PASS END=39325152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 39325153 . C . PASS END=39325196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,599:0,48,255:18,0 chr1 39325197 . C . PASS END=39325197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,2 chr1 39325198 . C . LowGQ END=39325200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,476:15,0,255:16,2 chr1 39325201 . C . PASS END=39325201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:17,0 chr1 39325202 . C . PASS END=39325212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 39325213 . C . PASS END=39325213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 39325214 . C . PASS END=39325218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:18,0 chr1 39325219 . C . PASS END=39325219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 39325220 . C . PASS END=39325223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,645:0,54,255:18,0 chr1 39325224 . T . PASS END=39325224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:15,0 chr1 39325225 . C . PASS END=39325231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:17,0 chr1 39325232 . G . PASS END=39325232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 39325233 . C . PASS END=39325236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 39325237 . A . PASS END=39325237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,526:0,4,255:12,0 chr1 39325238 . G . PASS END=39325241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 39325242 . A . PASS END=39325242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:12,0 chr1 39325243 . A . PASS END=39325257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 39325258 . A . PASS END=39325258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 39325259 . A . PASS END=39325266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,428:0,42,255:14,0 chr1 39325267 . C . PASS END=39325288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 39325289 . C . PASS END=39325289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 39325290 . G . PASS END=39325292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 39325293 . T . PASS END=39325293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 39325294 . C . PASS END=39325297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 39325298 . C . PASS END=39325318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 39330342 . C . PASS END=39330386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:56:0,120,1800:0,144,255:40,0 chr1 39332552 . C . PASS END=39332556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 39332557 . C . PASS END=39332586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,961:0,81,255:40,0 chr1 39332587 . C . PASS END=39332587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:61:48:0,61,1413:0,61,255:40,0 chr1 39332588 . T . PASS END=39332681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,131,255:40,0 chr1 39333234 . T . PASS END=39333282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:62:0,120,1800:0,179,255:40,0 chr1 39338690 . C . PASS END=39338708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:25,0 chr1 39338709 . C . PASS END=39338709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 39338710 . A . PASS END=39338711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 39338712 . C . PASS END=39338759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1031:0,81,255:36,0 chr1 39338760 . G . PASS END=39338760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:30,0 chr1 39338761 . G . PASS END=39338762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:32,0 chr1 39338963 . T . PASS END=39338963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,382:0,3,255:12,0 chr1 39338964 . T . PASS END=39338965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 39338966 . G . PASS END=39338968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 39338969 . A . PASS END=39338969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 39338970 . T . PASS END=39338970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 39338971 . G . PASS END=39338977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 39339358 . T . PASS END=39339392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 39339393 . G . PASS END=39339411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,781:0,66,255:25,0 chr1 39339412 . T . PASS END=39339427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,892:0,69,255:26,0 chr1 39339428 . C . PASS END=39339430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 39339431 . A . PASS END=39339435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 39339436 . G . PASS END=39339448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:31,0 chr1 39339449 . C T, 46.54 PASS DP=31;MQ=250.00;MQRankSum=4.603;ReadPosRankSum=0.223;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,12,0:0.387,0.000:31:9,7,0:10,5,0:46:81,0,50,426,671,1097:255,0,255:19,0:4.6541e+01,1.1804e-04,5.3000e+01,4.2596e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,8,4:9,10,7,5 chr1 39339450 . G . PASS END=39339454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 39339455 . G . PASS END=39339455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 39339456 . G . PASS END=39339459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 39339460 . T . PASS END=39339460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 39339461 . T . PASS END=39339486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:30,0 chr1 39339487 . T . PASS END=39339494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1056:0,90,255:31,0 chr1 39339495 . T . PASS END=39339495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 39339496 . T . PASS END=39339500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 39339501 . T . PASS END=39339501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 39339502 . C . PASS END=39339502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 39339503 . T . PASS END=39339503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:28,0 chr1 39339504 . C . PASS END=39339542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:32,0 chr1 39339543 . T . PASS END=39339564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,71,255:26,0 chr1 39339565 . A . PASS END=39339565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:19,0 chr1 39339566 . G . PASS END=39339571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 39339572 . G . PASS END=39339581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,46,255:19,0 chr1 39340223 . T . PASS END=39340244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,113,1537:0,113,255:40,0 chr1 39340245 . A . PASS END=39340281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,102,1410:0,102,255:40,0 chr1 39340282 . C T, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=3.287;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,24,0:0.533,0.000:45:13,12,0:8,12,0:48:85,0,50,829,713,1542:255,0,255:19,0:5.0000e+01,6.7304e-05,5.2609e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,13,11:10,11,15,9 chr1 39340283 . G . PASS END=39340319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:43:0,98,1243:0,98,255:40,0 chr1 39340320 . A . PASS END=39340485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:37:0,90,1350:0,98,255:40,0 chr1 39340486 . A . PASS END=39340486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:30,0 chr1 39340487 . G . PASS END=39341764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:34:0,84,1241:0,84,255:40,1 chr1 39341765 . C . PASS END=39341765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:28,0 chr1 39341766 . C . PASS END=39341770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 39347104 . C . PASS END=39347139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:87:0,120,1800:0,231,255:40,0 chr1 39352176 . T . PASS END=39352233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:52:0,93,1729:0,93,255:40,0 chr1 39352234 . T . PASS END=39352270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,162,255:40,0 chr1 39352271 . G T, 49.95 PASS DP=67;MQ=250.00;MQRankSum=6.973;ReadPosRankSum=4.510;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,32,0:0.485,0.000:66:15,20,0:19,12,0:48:85,0,50,1132,1146,2278:255,0,255:32,0:4.9950e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,21,15,17:16,18,21,11 chr1 39352272 . C . PASS END=39352308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,143,255:40,0 chr1 39352309 . A . PASS END=39352355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:89:40:0,89,1362:0,89,255:40,0 chr1 39353635 . C . PASS END=39353696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,169,255:40,0 chr1 39358836 . T . PASS END=39358896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,248,255:40,0 chr1 39361641 . C . PASS END=39361652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,108,1635:0,108,255:40,0 chr1 39361653 . C . PASS END=39361741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:37:0,91,1402:0,91,255:40,0 chr1 39376994 . C . PASS END=39377101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:33:0,96,1219:0,99,255:40,0 chr1 39377102 . G . PASS END=39377102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:32,0 chr1 39377103 . A . PASS END=39377106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:34:0,99,1485:0,101,255:33,0 chr1 39381230 . T . PASS END=39381359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,109,1710:0,109,255:40,0 chr1 39381360 . G . PASS END=39381360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1480:0,74,255:37,0 chr1 39381361 . C . PASS END=39381382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1363:0,81,255:39,0 chr1 39384639 . C . PASS END=39384644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 39384645 . C . PASS END=39384645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 39384646 . A . PASS END=39384649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:22,0 chr1 39384650 . T . PASS END=39384650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 39384651 . G . PASS END=39384659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 39384660 . G . PASS END=39384703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,928:0,81,255:39,0 chr1 39384704 . T . PASS END=39384704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:48:42:0,48,1360:0,48,255:39,0 chr1 39384705 . T . PASS END=39384838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:88:42:0,88,1417:0,88,255:40,0 chr1 39384839 . T . PASS END=39384839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1355:0,76,255:36,0 chr1 39384840 . A . PASS END=39384844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:44:0,96,1454:0,96,255:37,0 chr1 39384845 . G . PASS END=39384845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1500:0,66,255:32,0 chr1 39384846 . A . PASS END=39384853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1350:0,101,255:33,0 chr1 39384854 . T . PASS END=39384854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1274:0,62,255:31,0 chr1 39384855 . C . PASS END=39384878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1164:0,83,255:35,0 chr1 39384879 . A . PASS END=39384905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:26,0 chr1 39384906 . C . PASS END=39384906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 39384907 . C . PASS END=39384911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 39384912 . A . PASS END=39384912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 39384913 . G . PASS END=39384917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 39384918 . T . PASS END=39384921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 39384922 . T . PASS END=39384924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 39384925 . C . PASS END=39384925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 39384926 . A . PASS END=39384935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 39384936 . A . PASS END=39384936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 39384937 . G . PASS END=39384939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 39384940 . G . PASS END=39384940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 39384941 . G . PASS END=39384947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 39384948 . G . PASS END=39384954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 39384955 . G . PASS END=39384957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 39384958 . T . PASS END=39384982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr1 39384983 . C . PASS END=39385009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 39395067 . C . PASS END=39395073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,984:0,65,255:26,0 chr1 39395074 . T . PASS END=39395074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:25,0 chr1 39395075 . C . PASS END=39395083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 39395084 . A . PASS END=39395092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:30,0 chr1 39395093 . G . PASS END=39395093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 39395094 . G . PASS END=39395106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1141:0,93,255:36,0 chr1 39395107 . C . PASS END=39395108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:35,0 chr1 39395109 . A . PASS END=39395153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1200:0,81,255:36,0 chr1 39395154 . T . PASS END=39395155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 39395156 . A . PASS END=39395159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:29,0 chr1 39395160 . T . PASS END=39395160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 39395161 . G . PASS END=39395167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 39395168 . T . PASS END=39395181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,945:0,74,255:25,0 chr1 39457053 . A . PASS END=39457053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr1 39457054 . T . PASS END=39457099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 39457100 . G . PASS END=39457146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,170:0,15,170:6,0 chr1 39457147 . C . PASS END=39457158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:6:0,9,135:0,18,210:3,0 chr1 39457159 . C . PASS END=39457209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 39457210 . C . PASS END=39457211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 39457212 . C . PASS END=39457255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:6,0 chr1 39457256 . G . PASS END=39457272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr1 39463843 . A . PASS END=39463983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1005:0,80,255:40,0 chr1 39466644 . G . PASS END=39466663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1243:0,86,255:37,0 chr1 39466664 . G . PASS END=39466748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,120,1800:0,126,255:40,0 chr1 39466749 . A . PASS END=39466778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:36:0,90,1350:0,108,255:40,0 chr1 39469019 . A . PASS END=39469090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,120,1800:0,124,255:40,0 chr1 39469717 . A . PASS END=39469727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:61:0,120,1800:0,137,255:40,0 chr1 39494397 . A . PASS END=39494398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 39494399 . G . PASS END=39494407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 39494408 . G . PASS END=39494408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 39494409 . G . PASS END=39494411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr1 39494412 . A . PASS END=39494412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 39494413 . T . PASS END=39494605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:31:0,87,1227:0,87,255:40,0 chr1 39494606 . G . PASS END=39494606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:38,0 chr1 39494607 . A . PASS END=39494610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,107,255:38,0 chr1 39494611 . C . PASS END=39494611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1390:0,68,255:35,0 chr1 39494612 . G . PASS END=39494612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 39500064 . A . PASS END=39500068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 39500069 . A . PASS END=39500070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 39500071 . G . PASS END=39500074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,829:0,69,255:24,0 chr1 39500075 . A . PASS END=39500075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 39500076 . G . PASS END=39500076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 39500077 . G . PASS END=39500077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 39500078 . T . PASS END=39500089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 39500090 . G . PASS END=39500090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:25,0 chr1 39500091 . C . PASS END=39500094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,911:0,78,255:26,0 chr1 39500095 . G . PASS END=39500095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 39500096 . G . PASS END=39500109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr1 39500110 . A . PASS END=39500122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1023:0,81,255:31,0 chr1 39500123 . C . PASS END=39500123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 39500124 . A . PASS END=39500143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:30,0 chr1 39500144 . T . PASS END=39500144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr1 39500145 . G . PASS END=39500158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 39500159 . T . PASS END=39500163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:23,0 chr1 39500164 . C . PASS END=39500168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,84,255:18,0 chr1 39549891 . A . PASS END=39549892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 39549893 . G . PASS END=39549911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr1 39549912 . A . PASS END=39549912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 39549913 . C . PASS END=39549928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 39549929 . A . PASS END=39549945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 39549946 . C . PASS END=39549982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 39549983 . G A, 49.21 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=-2.217;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:5,6,0:9,5,0:48:84,0,50,385,501,886:255,0,255:13,0:4.9213e+01,7.3776e-05,5.3000e+01,3.8548e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,5,6:9,5,4,7 chr1 39549984 . G . PASS END=39549991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr1 39549992 . G . PASS END=39549992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39549993 . T . PASS END=39550002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 39550003 . C . PASS END=39550006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 39550007 . A . PASS END=39550007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,2 chr1 39550008 . G . PASS END=39550008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1094:0,30,255:29,2 chr1 39550009 . G . PASS END=39550009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 39550010 . G . PASS END=39550020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:33,0 chr1 39550021 . C . PASS END=39550070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1264:0,95,255:39,0 chr1 39550071 . G . PASS END=39550110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr1 39568375 . A . PASS END=39568520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:30:0,81,1215:0,90,255:40,0 chr1 39571296 . A . PASS END=39571307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,732:0,66,255:22,0 chr1 39571308 . G . PASS END=39571309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:21,0 chr1 39571310 . G . PASS END=39571312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 39571313 . G . PASS END=39571313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 39571314 . G . PASS END=39571318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 39571319 . G . PASS END=39571319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 39571320 . C . PASS END=39571321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 39571322 . G . PASS END=39571322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 39571323 . C . PASS END=39571324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr1 39571325 . G . PASS END=39571326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 39571327 . C . PASS END=39571349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,811:0,61,255:26,0 chr1 39571350 . T . PASS END=39571350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:26,0 chr1 39571351 . T . PASS END=39571353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 39571354 . T . PASS END=39571369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:26,0 chr1 39571370 . T . PASS END=39571370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr1 39571371 . G . PASS END=39571372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 39571373 . G . PASS END=39571374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 39571375 . T . PASS END=39571378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 39571379 . G . PASS END=39571379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 39571380 . C . PASS END=39571384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 39571385 . C . PASS END=39571389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,58,255:19,0 chr1 39624641 . A . PASS END=39624692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:53:0,120,1800:0,126,255:40,0 chr1 39670695 . A . PASS END=39670811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:39:0,81,1215:0,104,255:40,0 chr1 39680220 . A . PASS END=39680238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,194,255:40,0 chr1 39681035 . A . PASS END=39681065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,116,1651:0,116,255:40,0 chr1 39681066 . T . PASS END=39681093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:47:0,87,1305:0,89,255:40,0 chr1 39681094 . C . PASS END=39681094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:69:50:0,69,1035:0,133,255:23,0 chr1 39681095 . T . PASS END=39681101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:45:49:0,45,675:0,134,255:18,0 chr1 39696854 . A . PASS END=39696915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,105,1575:0,113,255:40,0 chr1 39715686 . G . PASS END=39715775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,114,1443:0,114,255:40,0 chr1 39717518 . G . PASS END=39717521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 39717522 . C . PASS END=39717528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 39717529 . G . PASS END=39717565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:33:0,93,1241:0,99,255:39,0 chr1 39717566 . T C, 161.37 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,16,0:0,22,0:111:199,114,0,1473,114,1473:255,114,0:0,0:1.6137e+02,1.1137e+02,0.0000e+00,4.5000e+02,1.4614e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,20:0,0,18,20 chr1 39717567 . G . PASS END=39717603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1239:0,101,255:38,0 chr1 39717604 . T . PASS END=39717612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:29,0 chr1 39717613 . A . PASS END=39717613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 39719970 . C . PASS END=39720047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1239:0,84,255:40,0 chr1 39723608 . G . PASS END=39723658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1205:0,96,255:38,0 chr1 39723659 . T . PASS END=39723659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1163:0,64,255:36,0 chr1 39723660 . T . PASS END=39723683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1233:0,86,255:37,0 chr1 39723684 . T . PASS END=39723684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 39723685 . T . PASS END=39723700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1020:0,93,255:31,0 chr1 39734370 . A . PASS END=39734377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,803:0,72,255:25,0 chr1 39734378 . T . PASS END=39734378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 39734379 . T . PASS END=39734386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 39734387 . C . PASS END=39734450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1008:0,81,255:39,0 chr1 39734451 . A . PASS END=39734451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:36,0 chr1 39734452 . G . PASS END=39734549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:35:0,89,1247:0,89,255:40,0 chr1 39734550 . A . PASS END=39734550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:31,0 chr1 39734551 . C . PASS END=39734600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1113:0,83,255:33,0 chr1 39734601 . G . PASS END=39734602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:25,0 chr1 39734603 . A . PASS END=39734617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:51:22:0,51,765:0,66,255:19,0 chr1 39734618 . C . PASS END=39734623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 39734624 . A . PASS END=39734625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 39734626 . A . PASS END=39734626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:17,0 chr1 39734627 . T . PASS END=39734636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:19:0,49,668:0,49,255:19,0 chr1 39734637 . C . PASS END=39734641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 39734642 . G . PASS END=39734666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 39734667 . G . PASS END=39734668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39734669 . C . PASS END=39734670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 39734671 . A . PASS END=39734672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39734673 . C . PASS END=39734674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 39734675 . G . PASS END=39734685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 39734686 . T . PASS END=39734686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 39734687 . A . PASS END=39734696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 39734697 . G . PASS END=39734699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 39734700 . A . PASS END=39734700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 39734701 . G . PASS END=39734711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,752:0,63,255:21,0 chr1 39734712 . G . PASS END=39734713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 39734714 . G . PASS END=39734733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,876:0,69,255:23,0 chr1 39734734 . T G, 49.87 PASS DP=24;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=2.554;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:6,4,0:6,7,0:48:85,0,50,356,429,785:255,0,255:12,0:4.9866e+01,6.6527e-05,5.3000e+01,3.5591e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,7,4:9,3,4,7 chr1 39734735 . G . PASS END=39734745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,696:0,69,255:23,0 chr1 39734746 . A . PASS END=39734746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 39734747 . G . PASS END=39734771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,925:0,75,255:25,0 chr1 39734772 . G . PASS END=39734788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 39734789 . G . PASS END=39734789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 39734790 . A . PASS END=39734796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 39734797 . T . PASS END=39734850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:19,0 chr1 39734851 . G . PASS END=39734852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 39734853 . C . PASS END=39734879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,578:0,40,255:19,0 chr1 39734880 . T . PASS END=39734880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:18,0 chr1 39734881 . C . PASS END=39734887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 39734888 . C . PASS END=39734890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 39734891 . C . PASS END=39734893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 39734894 . G . PASS END=39734910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,879:0,66,255:26,0 chr1 39734911 . T . PASS END=39734919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 39734920 . A . PASS END=39734920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,715:0,17,255:24,0 chr1 39734921 . G . PASS END=39734921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 39734922 . A . PASS END=39734922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,859:0,70,255:28,0 chr1 39734923 . C . PASS END=39734939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1143:0,85,255:34,0 chr1 39734940 . A . PASS END=39734940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:31,0 chr1 39734941 . A . PASS END=39735014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1310:0,92,255:39,0 chr1 39735015 . T . PASS END=39735015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1272:0,72,255:36,0 chr1 39735016 . T . PASS END=39735346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1182:0,87,255:40,0 chr1 39735347 . T . PASS END=39735349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1266:0,69,255:34,0 chr1 39735350 . T . PASS END=39735350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 39735351 . T . PASS END=39735351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1124:0,69,255:34,0 chr1 39735352 . C . PASS END=39735377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1149:0,82,255:34,0 chr1 39735378 . T . PASS END=39735380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,1029:0,63,255:25,0 chr1 39735381 . G . PASS END=39735381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1039:0,38,255:22,0 chr1 39735382 . G . PASS END=39735388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:24,0 chr1 39735389 . A . PASS END=39735392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:24:0,57,855:0,65,255:19,0 chr1 39747880 . A . PASS END=39747883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,939:0,64,255:25,0 chr1 39747884 . C . PASS END=39747884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr1 39747885 . T . PASS END=39747885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 39747886 . G . PASS END=39747886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39747887 . A . PASS END=39747887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 39747888 . C . PASS END=39747889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:29,0 chr1 39747890 . T . PASS END=39747890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 39747891 . C . PASS END=39747894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:31,0 chr1 39747895 . A . PASS END=39747895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:31,0 chr1 39747896 . T . PASS END=39748029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1142:0,86,255:40,0 chr1 39748030 . C . PASS END=39748044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,67,255:26,0 chr1 39748045 . C . PASS END=39748046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 39748861 . A . PASS END=39748883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,107,1639:0,107,255:40,0 chr1 39748884 . G . PASS END=39748920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:60:0,120,1800:0,164,255:40,0 chr1 39748921 . G A, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.838;ReadPosRankSum=5.422;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,35,0:0.547,0.000:64:13,15,0:16,20,0:48:85,0,49,1157,1035,2192:255,0,255:27,0:5.0000e+01,6.8598e-05,5.2380e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,11,15,20:14,15,17,18 chr1 39748922 . G . PASS END=39748958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,145,255:40,0 chr1 39748959 . T . PASS END=39748973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,151,255:40,0 chr1 39749081 . A . PASS END=39749187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,111,1665:0,140,255:40,0 chr1 39749738 . G . PASS END=39749857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:91:46:0,91,1575:0,91,255:40,0 chr1 39750005 . G . PASS END=39750100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:70:0,120,1800:0,163,255:40,0 chr1 39750755 . G . PASS END=39750868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:38:0,81,1310:0,81,255:40,0 chr1 39750869 . C . PASS END=39750882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:57:0,120,1800:0,171,255:40,0 chr1 39750969 . G . PASS END=39751062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:68:0,120,1800:0,169,255:40,0 chr1 39751276 . G . PASS END=39751376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:37:0,89,1296:0,89,255:40,0 chr1 39751377 . T . PASS END=39751377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1230:0,75,255:34,0 chr1 39751378 . C . PASS END=39751401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,92,255:35,0 chr1 39751402 . T . PASS END=39751402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:30,0 chr1 39751403 . A . PASS END=39751407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:32,0 chr1 39751408 . C . PASS END=39751430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,63,255:25,0 chr1 39752958 . G . PASS END=39752984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,817:0,66,255:26,0 chr1 39752985 . C . PASS END=39752985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39752986 . A . PASS END=39752986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 39752987 . C . PASS END=39752990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1117:0,90,255:30,0 chr1 39752991 . G . PASS END=39752991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 39752992 . C . PASS END=39753195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:33:0,85,1172:0,85,255:40,0 chr1 39753196 . T . PASS END=39753196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1237:0,70,255:38,0 chr1 39753197 . T . PASS END=39753234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:32:0,80,1147:0,80,255:38,0 chr1 39757582 . A . PASS END=39757693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:33:0,86,1247:0,86,255:40,0 chr1 39757694 . A . PASS END=39757694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 39757695 . G . PASS END=39757697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 39757698 . C . PASS END=39757710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,74,255:22,0 chr1 39758438 . G . PASS END=39758515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,120,1800:0,125,255:40,0 chr1 39759130 . G . PASS END=39759133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:25,0 chr1 39759134 . C . PASS END=39759135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 39759136 . T . PASS END=39759136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 39759137 . C . PASS END=39759140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 39759141 . C . PASS END=39759141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 39759142 . T . PASS END=39759291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:30:0,80,1021:0,80,255:40,0 chr1 39760718 . G . PASS END=39760822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,114,1710:0,118,255:40,0 chr1 39761459 . G . PASS END=39761554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,192,255:40,0 chr1 39763292 . T . PASS END=39763414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,96,255:40,0 chr1 39763415 . A . PASS END=39763416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 39763417 . G . PASS END=39763417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:25,0 chr1 39764924 . G . PASS END=39764929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 39765882 . G . PASS END=39766017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:30:0,87,1210:0,90,255:40,0 chr1 39766018 . A . PASS END=39766028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 39766029 . A . PASS END=39766034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,74,255:26,0 chr1 39768596 . A . PASS END=39768750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:86:34:0,86,1209:0,86,255:40,0 chr1 39775242 . G . PASS END=39775366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:33:0,81,1215:0,83,255:40,0 chr1 39775367 . A . PASS END=39775368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 39775917 . C . PASS END=39775918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 39775919 . T . PASS END=39775921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 39775922 . A . PASS END=39775935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:31,0 chr1 39775936 . G . PASS END=39775936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 39775937 . G . PASS END=39775944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 39775945 . A . PASS END=39775945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 39775946 . T . PASS END=39775980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1135:0,91,255:35,0 chr1 39775981 . A . PASS END=39775981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:33,0 chr1 39775982 . C . PASS END=39776017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:35:0,91,1242:0,91,255:39,0 chr1 39776018 . A . PASS END=39776018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1254:0,78,255:32,0 chr1 39776019 . G . PASS END=39776022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 39776023 . C . PASS END=39776023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:33,0 chr1 39776024 . T . PASS END=39776050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:35,0 chr1 39776051 . G . PASS END=39776056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:33:0,63,1164:0,63,255:29,0 chr1 39776057 . T . PASS END=39776060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 39776061 . A . PASS END=39776090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:25,0 chr1 39776091 . A . PASS END=39776100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,50,255:18,0 chr1 39776503 . A . PASS END=39776503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 39776504 . G . PASS END=39776521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,893:0,72,255:26,0 chr1 39776522 . G . PASS END=39776522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 39776523 . G . PASS END=39776557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr1 39776558 . G . PASS END=39776558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 39776559 . C . PASS END=39776567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 39776568 . G . PASS END=39776570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 39776571 . G . PASS END=39776572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 39776573 . G . PASS END=39776578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 39776579 . A . PASS END=39776581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr1 39776582 . G . PASS END=39776585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39776586 . G . PASS END=39776586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 39776587 . T . PASS END=39776595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 39776596 . G . PASS END=39776599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 39776600 . T . PASS END=39776600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 39776601 . C . PASS END=39776601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr1 39776602 . A . PASS END=39776610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 39776611 . C . PASS END=39776611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 39776612 . C . PASS END=39776617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 39776618 . T . PASS END=39776635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 39776636 . C . PASS END=39776636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 39776637 . T . PASS END=39776642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 39776643 . G . PASS END=39776663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr1 39776664 . G . PASS END=39776664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 39776665 . A . PASS END=39776672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 39781185 . C . PASS END=39781355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:33:0,84,1260:0,96,255:40,0 chr1 39781356 . C . PASS END=39781363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:26,0 chr1 39782056 . C . PASS END=39782056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 39782063 . G . PASS END=39782065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 39782066 . A . PASS END=39782066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 39782067 . A . PASS END=39782071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:32,0 chr1 39782072 . A . PASS END=39782072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 39782073 . G . PASS END=39782201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:32:0,95,1061:0,95,255:40,0 chr1 39782886 . C . PASS END=39783079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:32:0,87,1229:0,89,255:40,0 chr1 39784125 . C . PASS END=39784131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1000:0,78,255:26,0 chr1 39784132 . G . PASS END=39784287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,898:0,81,255:40,0 chr1 39785336 . G . PASS END=39785419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:63:0,120,1800:0,173,255:40,0 chr1 39788280 . G . PASS END=39788387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,99,1452:0,99,255:40,0 chr1 39788582 . T . PASS END=39788585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,95,255:29,0 chr1 39788586 . T . PASS END=39788587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,80,255:26,0 chr1 39788588 . G . PASS END=39788680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:38:0,87,1327:0,87,255:40,1 chr1 39789865 . A . PASS END=39790017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:31:0,86,1187:0,86,255:40,0 chr1 39790318 . G . PASS END=39790406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,120,1800:0,123,255:40,0 chr1 39792890 . G . PASS END=39792898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:24,0 chr1 39792899 . A . PASS END=39792899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 39792900 . A . PASS END=39792907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:26,0 chr1 39792908 . G . PASS END=39792915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr1 39792916 . T . PASS END=39792916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:30,0 chr1 39792917 . A . PASS END=39792917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1068:0,63,255:30,0 chr1 39792918 . T . PASS END=39792918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1178:0,96,255:32,0 chr1 39792919 . C . PASS END=39792919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr1 39792920 . T . PASS END=39792930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:33,0 chr1 39792931 . A . PASS END=39792931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:31,0 chr1 39792932 . T . PASS END=39793014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:33:0,84,1260:0,89,255:40,0 chr1 39793015 . C . PASS END=39793025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 39794273 . T . PASS END=39794290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,105,1575:0,114,255:38,0 chr1 39796875 . G . LowGQ END=39796877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,496:0,0,255:16,0 chr1 39796878 . T . PASS END=39796879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:16,0 chr1 39796880 . C . LowGQ END=39796881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,496:7,0,255:16,0 chr1 39796882 . G . PASS END=39796882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:17,0 chr1 39796883 . A . LowGQ END=39796883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,573:26,0,255:17,0 chr1 39796884 . G . PASS END=39796884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:17,0 chr1 39796885 . C . PASS END=39796885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,576:0,13,255:17,0 chr1 39796886 . A . PASS END=39796886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr1 39796887 . G . LowGQ END=39796887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,553:18,0,255:16,0 chr1 39796888 . T . PASS END=39796889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:18,0 chr1 39796890 . G . LowGQ END=39796890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,635:14,0,255:18,0 chr1 39796891 . C . PASS END=39796891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:18,0 chr1 39796892 . T . PASS END=39796892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,604:0,13,255:18,0 chr1 39796893 . G . PASS END=39796893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 39796894 . G . PASS END=39796894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 39796895 . G . PASS END=39796895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr1 39796896 . G . PASS END=39796896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:20,0 chr1 39796897 . T . PASS END=39796898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:23:0,38,767:0,38,255:22,0 chr1 39796899 . A . LowGQ END=39796899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,759:5,0,255:21,0 chr1 39796900 . T . PASS END=39796901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:33:24:0,33,732:0,33,255:22,0 chr1 39796902 . G . PASS END=39796903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:25,0 chr1 39796904 . C . PASS END=39796904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:25,0 chr1 39796905 . C . PASS END=39796905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:25,0 chr1 39796906 . T . PASS END=39796906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,914:0,34,255:25,0 chr1 39796907 . A . PASS END=39796908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 39796909 . G . PASS END=39796909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,1006:0,29,255:28,0 chr1 39796910 . C . PASS END=39796910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:29,0 chr1 39796911 . A . PASS END=39796911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1131:0,80,255:29,0 chr1 39796912 . C . PASS END=39796912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:31,0 chr1 39796913 . A . PASS END=39796913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1101:0,25,255:31,0 chr1 39796914 . G . PASS END=39796916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:32,0 chr1 39796917 . G . PASS END=39796917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1163:0,25,255:32,0 chr1 39796918 . A . PASS END=39796918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1241:0,86,255:32,0 chr1 39796919 . G . PASS END=39796920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:33,0 chr1 39796921 . T . PASS END=39796921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 39796922 . A . PASS END=39796922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1119:0,28,255:33,0 chr1 39796923 . T . PASS END=39796924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1247:0,89,255:33,0 chr1 39796925 . T . PASS END=39796925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1202:0,28,255:33,0 chr1 39796926 . C . PASS END=39796926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:33,0 chr1 39796927 . C . PASS END=39796927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:33,0 chr1 39796928 . C . PASS END=39796929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1180:0,67,255:33,0 chr1 39796930 . T . PASS END=39796930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1178:0,58,255:31,0 chr1 39796931 . C . PASS END=39796931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1226:0,39,255:32,0 chr1 39796932 . T . PASS END=39796932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:32,0 chr1 39796933 . T . PASS END=39796933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1233:0,39,255:31,0 chr1 39796934 . C . PASS END=39796934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1263:0,53,255:31,0 chr1 39796935 . A . PASS END=39796939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1286:0,92,255:32,0 chr1 39796940 . C . PASS END=39796940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:32,0 chr1 39796941 . A . PASS END=39796942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1255:0,86,255:31,0 chr1 39796943 . G . PASS END=39796943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:32,0 chr1 39796944 . C . PASS END=39796944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 39796945 . A . PASS END=39796945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:31,0 chr1 39796946 . A . PASS END=39796946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 39796947 . A . PASS END=39796947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1150:0,66,255:31,0 chr1 39796948 . A . PASS END=39796948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1302:0,89,255:31,0 chr1 39796949 . G . PASS END=39796949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:32,0 chr1 39796950 . G . PASS END=39796952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1296:0,92,255:33,0 chr1 39796953 . C . PASS END=39796953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:33,0 chr1 39796954 . T . PASS END=39796956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1325:0,81,255:34,0 chr1 39796957 . T . PASS END=39796957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1203:0,56,255:34,0 chr1 39796958 . T . PASS END=39796958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1257:0,89,255:34,0 chr1 39796959 . G . PASS END=39796959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 39796960 . A . PASS END=39797025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1162:0,86,255:35,0 chr1 39797026 . C . PASS END=39797026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr1 39797027 . G . PASS END=39797041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr1 39797042 . T . PASS END=39797043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,934:0,73,255:26,0 chr1 39797044 . T . PASS END=39797045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 39797046 . G . PASS END=39797061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,74,255:25,0 chr1 39797062 . G . PASS END=39797062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 39797063 . A . PASS END=39797075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 39797076 . C . PASS END=39797076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr1 39797077 . C . PASS END=39797090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 39797091 . C . PASS END=39797092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr1 39797093 . G . PASS END=39797109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 39797110 . A . PASS END=39797110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 39797111 . T . PASS END=39797125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 39797126 . A . PASS END=39797128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 39797129 . C . PASS END=39797130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:24,0 chr1 39797131 . G . PASS END=39797132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 39797133 . C . PASS END=39797135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 39797136 . A . PASS END=39797211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1139:0,80,255:37,0 chr1 39797212 . T . PASS END=39797212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:36,0 chr1 39797213 . C . PASS END=39799227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1172:0,82,255:40,0 chr1 39799228 . T . PASS END=39799230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,83,255:26,0 chr1 39799231 . A . PASS END=39799235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 39799236 . A . PASS END=39799236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:27,0 chr1 39799237 . T . PASS END=39799252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1135:0,80,255:37,0 chr1 39799253 . G . PASS END=39799254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:37:0,78,1316:0,78,255:38,0 chr1 39799255 . T . PASS END=39799335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:82:37:0,82,1380:0,82,255:40,0 chr1 39799336 . T . PASS END=39799336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:32,0 chr1 39799337 . A . PASS END=39799641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:33:0,90,1271:0,92,255:40,0 chr1 39799642 . G . PASS END=39799678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,120,1800:0,129,255:40,0 chr1 39799679 . T C, 49.82 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=2.984;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,21,0:0.477,0.000:44:10,12,0:13,9,0:48:85,0,50,735,807,1542:255,0,255:22,0:4.9820e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,15,9,12:13,10,12,9 chr1 39799680 . A . PASS END=39799716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,114,1643:0,119,255:40,0 chr1 39799717 . G . PASS END=39799738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,114,1524:0,118,255:40,0 chr1 39799739 . G . PASS END=39799739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:38:45:0,38,1327:0,38,255:39,0 chr1 39799740 . G . LowGQ END=39799740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:0:45:0,0,1166:1,0,255:38,0 chr1 39799741 . C . PASS END=39799948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:38:0,85,1413:0,85,255:40,0 chr1 39799949 . A . PASS END=39799949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1690:0,78,255:40,0 chr1 39799950 . G . PASS END=39801473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:88:41:0,88,1415:0,88,255:40,0 chr1 39801474 . G . PASS END=39801474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:44:47:0,44,1358:0,44,255:40,0 chr1 39801475 . G . PASS END=39801479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,125,255:40,0 chr1 39801480 . G . LowGQ END=39801480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,9:47:0:47:0,0,1062:23,0,255:36,0 chr1 39801481 . T . PASS END=39802259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:38:0,94,1366:0,94,255:40,0 chr1 39802260 . T . PASS END=39802260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:65:53:0,65,1770:0,65,255:40,0 chr1 39802261 . T . PASS END=39802293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:45:0,91,1552:0,91,255:40,0 chr1 39802294 . G . PASS END=39802310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:40:0,87,1305:0,107,255:33,0 chr1 39802311 . T . PASS END=39802322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:60:36:0,60,900:0,84,255:24,0 chr1 39802323 . C . PASS END=39802325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:54:33:0,54,810:0,99,255:18,0 chr1 39802854 . A . PASS END=39803003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:37:0,90,1350:0,107,255:40,0 chr1 39806174 . G . PASS END=39806194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,544:0,48,255:16,0 chr1 39806195 . G . PASS END=39806195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 39806196 . A . PASS END=39806196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 39806197 . T . PASS END=39806197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 39806198 . C . PASS END=39806198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 39806199 . T . PASS END=39806199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr1 39806200 . G . PASS END=39806203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 39806204 . A . PASS END=39806206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 39806207 . T . PASS END=39806208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 39806209 . G . PASS END=39806218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 39806219 . G . PASS END=39806232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:29,0 chr1 39806233 . G . PASS END=39806233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 39806234 . A . PASS END=39806237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 39806238 . A . PASS END=39806238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 39806239 . G . PASS END=39806240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 39806241 . T . PASS END=39806242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1062:0,60,255:27,0 chr1 39806243 . A . PASS END=39806254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 39806255 . C . PASS END=39806255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 39806256 . C . PASS END=39806301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr1 39806302 . C . PASS END=39806302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 39806303 . A . PASS END=39806315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr1 39806316 . A . PASS END=39806319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 39806320 . T . PASS END=39806336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1249:0,86,255:33,0 chr1 39806337 . A . PASS END=39806337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr1 39806338 . C . PASS END=39806366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1111:0,80,255:31,0 chr1 39806367 . A . PASS END=39806369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 39806370 . A . PASS END=39806373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 39806374 . T . PASS END=39806375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:31,0 chr1 39806376 . T . PASS END=39806376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 39806377 . G . PASS END=39806379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1210:0,63,255:31,0 chr1 39806380 . A . PASS END=39806384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,993:0,41,255:30,0 chr1 39806385 . A . PASS END=39806386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 39806387 . A . PASS END=39806387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 39806388 . A . PASS END=39806388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 39806389 . G . PASS END=39806389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr1 39806476 . A . PASS END=39806572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:61:0,120,1800:0,167,255:40,0 chr1 39806573 . C . PASS END=39806609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,105,1678:0,105,255:40,0 chr1 39806610 . C T, 189.61 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,19,0:0,29,0:140:227,143,0,1704,143,1704:255,144,0:0,0:1.8961e+02,1.3961e+02,0.0000e+00,4.5000e+02,1.7438e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,31:0,0,24,24 chr1 39806611 . C . PASS END=39806625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:36:0,90,1350:0,101,255:37,0 chr1 39812649 . G . PASS END=39812649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 39812650 . A . PASS END=39812657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,438:0,42,255:15,0 chr1 39812658 . C . PASS END=39812659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39812660 . G . PASS END=39812675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,868:0,62,255:26,0 chr1 39812676 . A . PASS END=39812678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,916:0,81,255:27,0 chr1 39812679 . G . PASS END=39812685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 39812686 . T . PASS END=39812687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39812688 . G . PASS END=39812689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:26,0 chr1 39812690 . T . PASS END=39812695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 39812696 . T . PASS END=39812696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 39812697 . G . PASS END=39812699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1194:0,93,255:31,0 chr1 39812700 . T . PASS END=39812700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 39812701 . T . PASS END=39812716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1225:0,93,255:33,0 chr1 39812717 . T . PASS END=39812717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:32,0 chr1 39812718 . A . PASS END=39812784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1164:0,85,255:37,0 chr1 39812785 . T . PASS END=39812788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 39812789 . G . PASS END=39812789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 39812790 . A . PASS END=39812799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1139:0,80,255:28,0 chr1 39812800 . A . PASS END=39812821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:27:0,66,990:0,71,255:26,0 chr1 39812822 . C A, 133.82 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,20,0:0,9,0:84:172,87,0,1085,87,1085:255,90,0:0,0:1.3382e+02,8.3821e+01,0.0000e+00,4.5000e+02,1.1859e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,21:0,0,13,16 chr1 39812823 . G . PASS END=39812832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 39812833 . A . PASS END=39812839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 39812840 . G . PASS END=39812840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:24,0 chr1 39812841 . C . PASS END=39812848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 39812849 . T . PASS END=39812849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,757:0,39,255:23,0 chr1 39812850 . C . PASS END=39812853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 39812854 . A . PASS END=39812854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 39812855 . A . PASS END=39812858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 39812859 . A . PASS END=39812859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:19,0 chr1 39812860 . T . PASS END=39812861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 39812862 . G . PASS END=39812862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 39812863 . A . PASS END=39812865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39812866 . A . PASS END=39812882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 39815150 . A . PASS END=39815150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr1 39815151 . C . PASS END=39815152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 39815153 . C . PASS END=39815153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 39815154 . T . PASS END=39815154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 39815155 . G . PASS END=39815299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:29:0,82,1078:0,82,255:40,0 chr1 39816457 . G . PASS END=39816641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1147:0,80,255:40,0 chr1 39816642 . G . PASS END=39816642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:29,0 chr1 39816643 . G . PASS END=39816664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 39816665 . C . PASS END=39816681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr1 39816682 . A . PASS END=39816682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 39816683 . C . PASS END=39816686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 39816687 . A . PASS END=39816690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr1 39818679 . A . PASS END=39818707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,787:0,66,255:26,0 chr1 39818708 . C . PASS END=39818715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39818716 . A . PASS END=39818718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 39818719 . T . PASS END=39818725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,999:0,84,255:28,0 chr1 39818726 . T . PASS END=39818726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 39818727 . C . PASS END=39818750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 39818751 . G . PASS END=39818751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:30,0 chr1 39818752 . G . PASS END=39818845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1097:0,80,255:34,0 chr1 39818846 . T . PASS END=39818852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:30:0,62,1102:0,62,255:26,0 chr1 39818853 . G . PASS END=39818853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 39818854 . G . PASS END=39818854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:27,0 chr1 39818855 . G . PASS END=39818860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39818861 . T . PASS END=39818861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 39818862 . C . PASS END=39818865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 39818866 . C . PASS END=39818886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 39818887 . A . PASS END=39818887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:20,0 chr1 39818888 . A . PASS END=39818898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 39818899 . T . PASS END=39818903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 39823047 . G . PASS END=39823049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 39823050 . C . PASS END=39823050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 39823051 . G . PASS END=39823061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 39823062 . T . PASS END=39823062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 39823063 . T . PASS END=39823063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:27,0 chr1 39823064 . G . PASS END=39823065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr1 39823066 . T . PASS END=39823066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,992:0,40,255:27,0 chr1 39823067 . G . PASS END=39823069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 39823070 . C . PASS END=39823070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 39823071 . C . PASS END=39823081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1025:0,87,255:29,0 chr1 39823082 . T . PASS END=39823082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 39823083 . T . PASS END=39823195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:28:0,83,1039:0,83,255:40,0 chr1 39823196 . C . PASS END=39823196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1327:0,73,255:36,0 chr1 39823197 . T . PASS END=39823243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:37:0,90,1281:0,90,255:39,0 chr1 39823244 . A . PASS END=39823244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:28,0 chr1 39823245 . C . PASS END=39823264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:33:0,89,1203:0,89,255:34,0 chr1 39823265 . A . PASS END=39823265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 39823266 . T . PASS END=39823272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1158:0,99,255:33,0 chr1 39823273 . A . PASS END=39823273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:26,0 chr1 39823274 . G . PASS END=39823281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,88,255:29,0 chr1 39823282 . A . PASS END=39823282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1192:0,58,255:25,0 chr1 39823283 . A . PASS END=39823284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 39823285 . A . PASS END=39823286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1064:0,74,255:27,0 chr1 39823287 . T . PASS END=39823287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,925:0,57,255:26,0 chr1 39823288 . T . PASS END=39823288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 39823289 . T . PASS END=39823289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 39823290 . G . PASS END=39823290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 39823291 . A . PASS END=39823291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 39823292 . A . PASS END=39823293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 39823294 . G . PASS END=39823296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 39823297 . G . PASS END=39823565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:32:0,83,1172:0,83,255:40,0 chr1 39824369 . T . PASS END=39824369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 39824370 . G . PASS END=39824373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 39824374 . A . PASS END=39824374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 39824375 . C . PASS END=39824386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:17,0 chr1 39824387 . C . PASS END=39824404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:25,0 chr1 39824405 . G . PASS END=39824411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:28,0 chr1 39824412 . A . PASS END=39824412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 39824413 . T . PASS END=39824418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 39824419 . A . PASS END=39824419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,863:0,67,255:26,0 chr1 39824420 . T . PASS END=39824428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1057:0,87,255:29,0 chr1 39824429 . A . PASS END=39824429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 39824430 . G . PASS END=39824437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 39824438 . A . PASS END=39824438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 39824439 . G . PASS END=39824541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,89,255:38,0 chr1 39824542 . A . PASS END=39824545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 39824813 . C . PASS END=39824898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1072:0,86,255:40,0 chr1 39824899 . G . PASS END=39824899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:45:43:0,45,1053:0,45,255:37,0 chr1 39824900 . C . PASS END=39824915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,105,1575:0,117,255:39,0 chr1 39824916 . G . PASS END=39824916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:33,0 chr1 39824917 . G . PASS END=39824936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:35:0,97,1287:0,97,255:35,0 chr1 39826465 . A . PASS END=39826482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:18,0 chr1 39826483 . T . PASS END=39826494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:24,0 chr1 39826495 . C . PASS END=39826668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:32:0,86,1233:0,86,255:40,0 chr1 39826669 . A . PASS END=39826669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 39826670 . T . PASS END=39826673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:30,0 chr1 39827032 . A . PASS END=39827293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:32:0,85,1205:0,85,255:40,0 chr1 39827294 . T . PASS END=39827294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1417:0,68,255:37,0 chr1 39827295 . G . PASS END=39827314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,104,255:38,0 chr1 39827315 . A . PASS END=39827315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:27,0 chr1 39827316 . T . PASS END=39827319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:29,0 chr1 39827320 . G . PASS END=39827326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1124:0,77,255:26,0 chr1 39827327 . C . PASS END=39827330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 39827331 . T . PASS END=39827349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 39833820 . G . PASS END=39833820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 39833821 . A . PASS END=39833821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,491:0,12,255:16,0 chr1 39833822 . G . PASS END=39833851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,576:0,40,255:19,0 chr1 39833852 . G . PASS END=39833852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 39833853 . A . PASS END=39833889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,829:0,63,255:26,0 chr1 39833890 . G . PASS END=39833899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1009:0,81,255:28,0 chr1 39833900 . C . PASS END=39833900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 39833901 . T . PASS END=39833901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39833902 . T . PASS END=39833903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 39833904 . G . PASS END=39833918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:27,0 chr1 39833919 . C . PASS END=39833951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 39833952 . G . PASS END=39833952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 39833953 . A . PASS END=39833956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 39833957 . C . PASS END=39833974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,60,255:19,0 chr1 39833975 . A . PASS END=39833975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 39833976 . G . PASS END=39833986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:15,0 chr1 39835699 . C . PASS END=39835699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 39835702 . A . PASS END=39835702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 39835703 . G . PASS END=39835703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 39835704 . A . PASS END=39835717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1172:0,111,255:40,0 chr1 39835718 . T . PASS END=39835718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1119:0,72,255:38,0 chr1 39835719 . C . PASS END=39835855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:37:0,84,1260:0,94,255:40,0 chr1 39835856 . A . PASS END=39835856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:28,0 chr1 39835857 . A . PASS END=39835857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:17:37:0,17,1109:0,17,255:26,0 chr1 39835858 . G . PASS END=39835858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 39838151 . A . PASS END=39838268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:37:0,96,1418:0,111,255:40,0 chr1 39844133 . G . PASS END=39844195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,119,1800:0,119,255:40,0 chr1 39844875 . A . PASS END=39844875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 39844876 . T . PASS END=39844876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 39844877 . C . PASS END=39844887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 39844888 . C . PASS END=39844888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 39844889 . C . PASS END=39845116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:29:0,83,1094:0,83,255:40,0 chr1 39845916 . G . PASS END=39846045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:36:0,84,1319:0,84,255:40,0 chr1 39847625 . A . PASS END=39847625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 39847626 . T . PASS END=39847632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 39847633 . T . PASS END=39847633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,777:0,58,255:23,0 chr1 39847634 . G . PASS END=39847635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 39847636 . G . PASS END=39847728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,964:0,81,255:34,0 chr1 39847729 . C . PASS END=39847729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:32,0 chr1 39847730 . G . PASS END=39847785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,91,255:34,0 chr1 39847786 . G . PASS END=39847817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,67,255:26,0 chr1 39847818 . G . PASS END=39847818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:19,0 chr1 39847819 . G . PASS END=39847822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:20,0 chr1 39847823 . A . PASS END=39847824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 39851106 . T . PASS END=39851114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 39851115 . A . PASS END=39851115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 39851116 . A . PASS END=39851127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,644:0,51,255:19,0 chr1 39851128 . C . PASS END=39851149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,731:0,60,255:27,0 chr1 39851150 . A . PASS END=39851152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 39851153 . G . PASS END=39851175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,84,255:38,0 chr1 39851176 . T . PASS END=39851176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:39,0 chr1 39851177 . A . PASS END=39851449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1148:0,83,255:40,0 chr1 39851450 . T . PASS END=39851450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1111:0,68,255:29,0 chr1 39851451 . G . PASS END=39851470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 39851471 . C . PASS END=39851473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 39851474 . G . PASS END=39851479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 39851480 . G . PASS END=39851494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:27:0,66,990:0,77,255:27,0 chr1 39851495 . G . PASS END=39851500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 39851501 . T . PASS END=39851501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:26,0 chr1 39851502 . G . PASS END=39851522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 39851523 . G . PASS END=39851528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39851529 . T . PASS END=39851554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 39851555 . T . PASS END=39851555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 39851556 . T . PASS END=39851560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 39851561 . G . PASS END=39851561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 39851562 . A . PASS END=39851564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 39851565 . G . PASS END=39851576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 39851577 . C . PASS END=39851579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 39851580 . C . PASS END=39851582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 39851583 . G . PASS END=39851583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 39851584 . G . PASS END=39851601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,576:0,40,255:19,0 chr1 39852859 . C . PASS END=39852859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 39852860 . C . PASS END=39852876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1244:0,87,255:39,0 chr1 39852877 . T . PASS END=39852877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1349:0,70,255:37,0 chr1 39852878 . C . PASS END=39853279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:82:35:0,82,1427:0,82,255:40,0 chr1 39853280 . T . PASS END=39853281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:32,0 chr1 39853282 . A . PASS END=39853282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 39853283 . A . PASS END=39853283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1159:0,69,255:30,0 chr1 39853284 . G . PASS END=39853598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:33:0,82,1202:0,82,255:40,0 chr1 39853599 . G . PASS END=39853599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1174:0,56,255:36,0 chr1 39853600 . C . PASS END=39854276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:38:0,81,1215:0,87,255:40,0 chr1 39854277 . T . PASS END=39854290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:68:28:0,68,1014:0,68,255:26,0 chr1 39854291 . C . PASS END=39854291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:25,0 chr1 39854292 . G . PASS END=39854321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,784:0,63,255:26,0 chr1 39854322 . G . PASS END=39854330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:18,0 chr1 39857540 . A . PASS END=39857554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,99,1549:0,99,255:40,0 chr1 39875938 . A . PASS END=39875938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 39875939 . T . PASS END=39875940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 39875941 . G . PASS END=39875941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:29,0 chr1 39875942 . G . PASS END=39876139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:84:31:0,84,1350:0,84,255:40,0 chr1 39876140 . G . LowGQ END=39876140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,12:51:0:51:0,0,1074:46,0,255:37,0 chr1 39876141 . T . PASS END=39876328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:40:0,111,1582:0,111,255:40,0 chr1 39876329 . G . PASS END=39876329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1441:0,79,255:37,0 chr1 39876330 . A . PASS END=39876387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:39:0,96,1440:0,112,255:40,0 chr1 39876388 . T . PASS END=39876388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1185:0,69,255:35,0 chr1 39876389 . C . PASS END=39876389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 39876390 . T . PASS END=39876390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1091:0,67,255:34,0 chr1 39876391 . C . PASS END=39876414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:35,0 chr1 39876415 . G . PASS END=39876415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 39876416 . C . PASS END=39876417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr1 39876418 . T . PASS END=39876418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 39876419 . C . PASS END=39876731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1097:0,80,255:40,0 chr1 39876732 . T . PASS END=39876732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:33,0 chr1 39876733 . T . PASS END=39876774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1271:0,89,255:34,0 chr1 39876775 . G . PASS END=39876775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:34,0 chr1 39876776 . A . PASS END=39876777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1350:0,82,255:30,0 chr1 39876778 . A . PASS END=39876778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:29,0 chr1 39876779 . C . PASS END=39877543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:36:0,91,1296:0,91,255:40,1 chr1 39877544 . A . PASS END=39877544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:30,0 chr1 39877545 . T . PASS END=39877566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1126:0,83,255:33,0 chr1 39877567 . G . PASS END=39877567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 39877568 . A . PASS END=39877569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:32,0 chr1 39877570 . T . PASS END=39877570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1173:0,74,255:30,0 chr1 39877571 . C . PASS END=39877586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:32:0,81,1194:0,83,255:33,0 chr1 39877587 . T . PASS END=39877597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,992:0,68,255:26,0 chr1 39877598 . T . PASS END=39877600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39877601 . T . PASS END=39877601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 39877602 . T . PASS END=39877606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1119:0,87,255:31,0 chr1 39877607 . A . PASS END=39877607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 39877608 . C . PASS END=39877610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 39877611 . T . PASS END=39877611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 39877612 . G . PASS END=39877613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 39877614 . T . PASS END=39877634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:27:0,69,1035:0,71,255:26,0 chr1 39877635 . T . PASS END=39877635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:23,0 chr1 39877636 . G . PASS END=39877642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:25,0 chr1 39877643 . A . PASS END=39877643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 39877644 . G . PASS END=39877655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,915:0,64,255:26,0 chr1 39877656 . A . PASS END=39877667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:30,0 chr1 39877668 . T . PASS END=39877668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 39877669 . A . PASS END=39877677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1216:0,83,255:30,0 chr1 39877678 . A . PASS END=39877678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 39877679 . C . PASS END=39877679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 39877680 . T . PASS END=39877681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 39877682 . C . PASS END=39877682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 39877683 . A . PASS END=39877698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 39877699 . C . PASS END=39877704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 39877705 . G . PASS END=39877705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 39877706 . C . PASS END=39877719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 39877720 . C . PASS END=39877729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 39877730 . T . PASS END=39877733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr1 39877734 . C . PASS END=39878233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:34:0,86,1219:0,86,255:40,0 chr1 39878234 . T . PASS END=39878234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:32,0 chr1 39878235 . G . PASS END=39878433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1207:0,93,255:40,0 chr1 39878434 . A . PASS END=39878505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,908:0,61,255:25,0 chr1 39878506 . G . PASS END=39878506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr1 39878507 . G . PASS END=39878529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,914:0,62,255:26,0 chr1 39878530 . G . PASS END=39878530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:23,0 chr1 39878531 . C . PASS END=39878543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr1 39878544 . T . PASS END=39878545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39878546 . C . PASS END=39878546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 39878547 . T . PASS END=39878547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 39878548 . G . PASS END=39878550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 39878551 . G . PASS END=39878552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 39878553 . T . PASS END=39878554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,986:0,68,255:27,0 chr1 39878555 . C . PASS END=39878555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 39878556 . T . PASS END=39878556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 39878557 . G . PASS END=39878557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:27,0 chr1 39878558 . C . PASS END=39878558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 39878559 . T . PASS END=39878559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 39878560 . T . PASS END=39878563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr1 39878564 . T . PASS END=39878564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 39878565 . G . PASS END=39878566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 39878567 . C . PASS END=39878567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:28,0 chr1 39878568 . C . PASS END=39878570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 39878571 . T . PASS END=39878571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 39878572 . C . PASS END=39878572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 39878573 . C . PASS END=39878573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 39878574 . A . PASS END=39878575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,986:0,51,255:28,0 chr1 39878576 . A . PASS END=39878576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 39878577 . T . PASS END=39878577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr1 39878578 . G . PASS END=39878579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39878580 . G . PASS END=39878580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 39878581 . G . PASS END=39878583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39878584 . A . PASS END=39878589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1031:0,60,255:27,0 chr1 39878590 . G . PASS END=39878590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1023:0,38,255:25,0 chr1 39878591 . T . PASS END=39878591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 39878592 . T . PASS END=39878592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:28,0 chr1 39878593 . G . PASS END=39878593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:26,0 chr1 39878594 . C . PASS END=39878597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 39878598 . A . PASS END=39878601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1088:0,77,255:28,0 chr1 39878602 . G . PASS END=39878602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr1 39878603 . T . PASS END=39878603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1004:0,79,255:28,0 chr1 39878604 . C . PASS END=39878604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 39878605 . T . PASS END=39878605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,984:0,38,255:26,0 chr1 39878606 . C . PASS END=39878608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 39878609 . T . PASS END=39878609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,925:0,32,255:24,0 chr1 39878610 . A . PASS END=39878611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1006:0,48,255:25,0 chr1 39878612 . A . PASS END=39878612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 39878613 . G . PASS END=39878613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:25,0 chr1 39878614 . G . PASS END=39878631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,817:0,61,255:25,0 chr1 39878632 . G . PASS END=39878632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 39878633 . C . PASS END=39878638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 39878639 . T . PASS END=39878639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,772:0,58,255:22,0 chr1 39878640 . A . PASS END=39878641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 39878642 . C . PASS END=39878656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:20:0,53,810:0,53,255:19,0 chr1 39878657 . C . PASS END=39878664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 39878665 . C . PASS END=39878679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,762:0,52,255:19,0 chr1 39878680 . T . PASS END=39878680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:17,0 chr1 39878681 . C . PASS END=39878685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:19,0 chr1 39878686 . C . PASS END=39878686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 39878687 . C . PASS END=39878713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 39878714 . T . PASS END=39878714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 39878715 . G . PASS END=39878735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 39878736 . T . PASS END=39878736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 39878737 . C . PASS END=39878762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr1 39878763 . G . PASS END=39878763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39878764 . G . PASS END=39878781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,692:0,57,255:19,0 chr1 39878782 . G . PASS END=39878815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr1 39878816 . T . PASS END=39878816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 39878817 . T . PASS END=39878832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,900:0,72,255:26,0 chr1 39878833 . G . PASS END=39878835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 39878836 . G . PASS END=39878836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 39878837 . A . PASS END=39878840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr1 39878841 . T . PASS END=39878841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 39878842 . G . PASS END=39878873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1072:0,83,255:32,0 chr1 39878874 . C . PASS END=39878879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:77:30:0,77,1108:0,77,255:26,0 chr1 39878880 . G . PASS END=39878880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 39878881 . C . PASS END=39878894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1016:0,71,255:26,0 chr1 39878895 . G . PASS END=39878895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 39878896 . C . PASS END=39878896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 39878897 . C . PASS END=39878906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,945:0,62,255:23,0 chr1 39878907 . A . PASS END=39878907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 39878908 . G . PASS END=39878908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 39878909 . C . PASS END=39878909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 39878910 . T . PASS END=39878910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 39878911 . G . PASS END=39878911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 39878912 . T . PASS END=39878912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 39878913 . C . PASS END=39878913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 39878914 . A . PASS END=39878914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 39878915 . G . PASS END=39878915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 39878916 . A . PASS END=39878916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 39878917 . G . PASS END=39878917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 39878918 . T . PASS END=39878918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 39878919 . G . PASS END=39878920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 39878921 . C . PASS END=39878921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 39878922 . C . PASS END=39878923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 39878924 . C . PASS END=39878931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,765:0,41,255:18,0 chr1 39878932 . G . PASS END=39878932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:16,0 chr1 39878933 . A . PASS END=39878933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:17,0 chr1 39878934 . G . PASS END=39878934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:17,0 chr1 39878935 . C . PASS END=39878935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:17,0 chr1 39878936 . C . PASS END=39878936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:17,0 chr1 39878937 . C . PASS END=39878937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,627:0,30,255:17,0 chr1 39878938 . G . PASS END=39878938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:17,0 chr1 39878939 . C . PASS END=39878939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,651:0,16,255:17,0 chr1 39878940 . C . PASS END=39878947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:19,0 chr1 39878948 . C . PASS END=39878948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 39878949 . T . PASS END=39878960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 39878961 . C . PASS END=39878981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:16:0,41,651:0,41,255:19,0 chr1 39878982 . C . PASS END=39878982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 39878983 . C . PASS END=39878992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 39878993 . C . PASS END=39878993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 39878994 . A . PASS END=39878999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 39879000 . C . PASS END=39879001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,51,255:11,0 chr1 39879002 . C . PASS END=39879033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,576:0,51,255:17,0 chr1 39879034 . G . PASS END=39879034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 39879035 . T . PASS END=39879049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,684:0,54,255:19,0 chr1 39879050 . A . PASS END=39879050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr1 39879051 . G . PASS END=39879053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 39879054 . C . PASS END=39879054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 39879055 . A . PASS END=39879055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,405:0,18,255:14,0 chr1 39879056 . C . PASS END=39879065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 39879066 . T . PASS END=39879066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 39879067 . G . PASS END=39879076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 39879077 . C . PASS END=39879077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 39879078 . C . PASS END=39879078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39879079 . A . PASS END=39879079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr1 39879080 . C . PASS END=39879088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 39879089 . A . PASS END=39879089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr1 39879090 . G . PASS END=39879091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 39879092 . C . PASS END=39879092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 39879093 . C . PASS END=39879102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 39879103 . G . PASS END=39879103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 39879104 . C . PASS END=39879105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 39879106 . G . LowGQ END=39879106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,302:19,0,255:8,0 chr1 39879107 . C . PASS END=39879109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 39879110 . C . PASS END=39879111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 39879112 . G . LowGQ END=39879112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:10,0 chr1 39879113 . T . PASS END=39879114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 39879115 . C . PASS END=39879115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:9,0 chr1 39879116 . C . PASS END=39879117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 39879118 . A . LowGQ END=39879118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,311:6,0,255:10,0 chr1 39879119 . C . PASS END=39879119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:10,0 chr1 39879120 . C . PASS END=39879120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 39879121 . C . PASS END=39879121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 39879122 . C . PASS END=39879123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 39879124 . G . LowGQ END=39879124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,286:0,0,255:8,0 chr1 39879125 . A . PASS END=39879125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 39879126 . G . PASS END=39879126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:9,0 chr1 39879127 . G . PASS END=39879127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 39879128 . A . LowGQ END=39879128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:9,0 chr1 39879129 . G . PASS END=39879136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 39879137 . C . PASS END=39879138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 39879139 . C . PASS END=39879143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,13,255:6,0 chr1 39879144 . T . LowGQ END=39879144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:1,0,255:3,0 chr1 39879145 . G . PASS END=39879147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,13,255:4,0 chr1 39879148 . G . PASS END=39879152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:2:8:0,2,135:0,2,233:4,0 chr1 39879153 . G . PASS END=39879173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,149:5,0 chr1 39879174 . C . PASS END=39879191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,103:3,0 chr1 39879192 . G . PASS END=39879196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:5,0 chr1 39879197 . C . PASS END=39879201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 39879202 . G . PASS END=39879235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr1 39879236 . C . PASS END=39879243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 39879244 . G . PASS END=39879244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 39879245 . A . PASS END=39879245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 39879246 . G . PASS END=39879246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 39879247 . C . PASS END=39879260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,550:0,45,255:17,0 chr1 39879261 . T . PASS END=39879261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 39879262 . G . PASS END=39879262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 39879263 . C . PASS END=39879263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr1 39879264 . T . PASS END=39879265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 39879266 . C . PASS END=39879274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:19,0 chr1 39879275 . C . PASS END=39879278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr1 39879279 . A . PASS END=39879279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 39879280 . G . PASS END=39879288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 39879289 . G . PASS END=39879289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 39879290 . C . PASS END=39879292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:23,0 chr1 39879293 . C . PASS END=39879293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:21,0 chr1 39879294 . C . PASS END=39879299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 39879300 . T . PASS END=39879300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 39879301 . G . PASS END=39879308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 39879309 . G . PASS END=39879309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 39879310 . C . PASS END=39879319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 39879320 . A . PASS END=39879320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 39879321 . G . PASS END=39879321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:21,0 chr1 39879322 . G . PASS END=39879324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,756:0,69,255:23,0 chr1 39879325 . C . PASS END=39879325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 39879326 . C . PASS END=39879326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 39879327 . C . PASS END=39879327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 39879328 . G . PASS END=39879328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,709:0,30,255:21,0 chr1 39879329 . C . PASS END=39879333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 39879334 . C . PASS END=39879334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:20,0 chr1 39879335 . C . PASS END=39879335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 39879336 . A . PASS END=39879337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 39879338 . C . PASS END=39879339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 39879340 . G . PASS END=39879340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39879341 . C . PASS END=39879342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 39879343 . G . PASS END=39879343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39879344 . C . PASS END=39879344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 39879345 . A . PASS END=39879348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:20,0 chr1 39879349 . C . PASS END=39879349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,606:0,13,255:18,0 chr1 39879350 . C . PASS END=39879350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 39879351 . C . PASS END=39879351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 39879352 . A . PASS END=39879352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 39879353 . C . PASS END=39879362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:20,0 chr1 39879363 . G . PASS END=39879364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 39879365 . C . PASS END=39879365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 39879366 . T C, 48.50 PASS DP=16;MQ=118.52;MQRankSum=-0.635;ReadPosRankSum=3.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,9,0:0.562,0.000:16:5,6,0:2,3,0:47:83,0,49,322,214,535:255,0,220:7,0:4.8500e+01,8.6719e-05,5.2332e+01,3.2184e+02,2.4835e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,2,7:4,3,5,4 chr1 39879367 . G . PASS END=39879367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,570:0,21,255:18,0 chr1 39879368 . C . PASS END=39879368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:17,0 chr1 39879369 . C . PASS END=39879370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 39879371 . T . PASS END=39879371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,590:0,5,255:16,0 chr1 39879372 . C . PASS END=39879377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:17,0 chr1 39879378 . T . PASS END=39879378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:16,0 chr1 39879379 . C . PASS END=39879379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,568:0,5,255:15,0 chr1 39879380 . C . PASS END=39879389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:17:0,46,698:0,46,255:17,0 chr1 39879390 . C . PASS END=39879397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,512:0,31,255:13,0 chr1 39879398 . A . PASS END=39879399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr1 39879400 . G . PASS END=39879401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:12,0 chr1 39879402 . A . LowGQ END=39879403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:11,0 chr1 39879404 . C . PASS END=39879404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 39879405 . C . LowGQ END=39879405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 39879406 . G A, 0.01 DRAGENSnpHardQUAL DP=12;MQ=184.51;MQRankSum=1.393;ReadPosRankSum=-1.741;FractionInformativeReads=0.833;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:5,0,0:4,1,0:26:9,0,50,36,277,313:16,0,255:9,0:1.1851e-02,2.5647e+01,7.8647e+01,6.1408e+01,3.3749e+02,3.4148e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,0,1:5,4,1,0 chr1 39879407 . C . PASS END=39879407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 39879408 . C . PASS END=39879411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 39879412 . G . LowGQ END=39879414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:0,0,255:10,0 chr1 39879415 . G . PASS END=39879416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 39879417 . T . LowGQ END=39879417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 39879418 . G . PASS END=39879418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 39879419 . T . LowGQ END=39879419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr1 39879420 . T . PASS END=39879421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 39879422 . C . LowGQ END=39879423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,311:6,0,255:9,0 chr1 39879424 . G . PASS END=39879425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 39879426 . G . PASS END=39879426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 39879427 . C . LowGQ END=39879427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:19,0,255:10,0 chr1 39879428 . C . PASS END=39879431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr1 39879432 . C . PASS END=39879443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 39879444 . T . PASS END=39879447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 39879448 . T . PASS END=39879448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 39879449 . C . PASS END=39879453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 39879454 . G . PASS END=39879454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 39879455 . C . PASS END=39879457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 39879458 . C . PASS END=39879462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 39879463 . G . PASS END=39879469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 39879470 . C . PASS END=39879476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:11,0 chr1 39879477 . A . PASS END=39879477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 39879478 . G . PASS END=39879478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 39879479 . A . PASS END=39879480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 39879481 . T . PASS END=39879481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 39879482 . C . PASS END=39879483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 39879484 . G . PASS END=39879489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 39879490 . T . PASS END=39879490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,355:0,6,255:11,0 chr1 39879491 . T . PASS END=39879492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 39879493 . G . PASS END=39879493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 39879494 . C . PASS END=39879494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 39879495 . A . PASS END=39879498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,435:0,25,255:14,0 chr1 39879499 . G . PASS END=39879500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 39879501 . G . PASS END=39879501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 39879502 . G . PASS END=39879502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 39879503 . T . PASS END=39879503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 39879504 . G . PASS END=39879504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 39879505 . G . PASS END=39879505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 39879506 . C . PASS END=39879506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 39879507 . C . PASS END=39879507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 39879508 . A . PASS END=39879509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:31:16:0,31,543:0,31,255:17,0 chr1 39879510 . C . PASS END=39879510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr1 39879511 . C . PASS END=39879512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 39879513 . G . PASS END=39879513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 39879514 . G . PASS END=39879535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,590:0,40,255:19,0 chr1 39879536 . C . PASS END=39879537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,565:0,32,255:16,0 chr1 39879538 . T . PASS END=39879542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 39879543 . G . PASS END=39879543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 39879544 . C . PASS END=39879544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 39879545 . C . PASS END=39879545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 39879546 . C . PASS END=39879546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 39879547 . A . PASS END=39879547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 39879548 . C . PASS END=39879551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:16,0 chr1 39879552 . T . PASS END=39879552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 39879553 . G . PASS END=39879563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,592:0,40,255:19,0 chr1 39879564 . G . PASS END=39879565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 39879566 . C . PASS END=39879568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 39879569 . C . PASS END=39879569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39879570 . C . PASS END=39879570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 39879571 . C . PASS END=39879576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 39879577 . G . PASS END=39879577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:20,0 chr1 39879578 . A . PASS END=39879578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 39879579 . A . PASS END=39879584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr1 39879585 . T . PASS END=39879586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:36:23:0,36,729:0,36,255:21,0 chr1 39879587 . C . PASS END=39879590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 39879591 . G . PASS END=39879591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 39879592 . G . PASS END=39879592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 39879593 . C . PASS END=39879593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:21,0 chr1 39879594 . A . PASS END=39879595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 39879596 . C . PASS END=39879596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 39879597 . T . PASS END=39879603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 39879604 . C . PASS END=39879604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 39879605 . C . PASS END=39879606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 39879607 . A . PASS END=39879607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 39879608 . C . PASS END=39879609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 39879610 . T . PASS END=39879610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:20,0 chr1 39879611 . C . PASS END=39879611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 39879612 . T . PASS END=39879612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 39879613 . G . PASS END=39879628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 39879629 . T . PASS END=39879630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 39879631 . G . PASS END=39879642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 39879643 . T . PASS END=39879643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 39879644 . C . PASS END=39879644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 39879645 . C . PASS END=39879646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 39879647 . A . LowGQ END=39879647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,704:0,0,255:18,0 chr1 39879648 . C . PASS END=39879654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39879655 . G . PASS END=39879660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr1 39879661 . A . PASS END=39879661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 39879662 . C . PASS END=39879665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,743:0,47,255:20,0 chr1 39879666 . C . PASS END=39879666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 39879667 . C . PASS END=39879668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr1 39879669 . A . PASS END=39879674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 39879675 . A . PASS END=39879675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 39879676 . G . PASS END=39879676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 39879677 . C . PASS END=39879677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 39879678 . A . PASS END=39879681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 39879682 . C . PASS END=39879687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:24:0,44,803:0,44,255:21,0 chr1 39879688 . C . PASS END=39879688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:18,0 chr1 39879689 . T . PASS END=39879695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,55,255:18,0 chr1 39879696 . A . PASS END=39879696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,676:0,33,255:17,0 chr1 39879697 . C . PASS END=39879697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:17,0 chr1 39879698 . C . PASS END=39879699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:19,0 chr1 39879700 . A . PASS END=39879700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:16,0 chr1 39879701 . C . PASS END=39879701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:17,0 chr1 39879702 . C . PASS END=39879703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 39879704 . C . PASS END=39879704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:16,0 chr1 39879705 . C . PASS END=39879705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr1 39879706 . T . PASS END=39879722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:18:0,47,698:0,47,255:18,0 chr1 39879723 . C . PASS END=39879723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 39879724 . A . PASS END=39879735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,525:0,48,255:17,0 chr1 39879736 . C . PASS END=39879736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 39879737 . T . PASS END=39879738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 39879739 . A . PASS END=39879739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 39879740 . G . PASS END=39879744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 39879745 . C . PASS END=39879745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 39879746 . C . PASS END=39879749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,653:0,54,255:18,0 chr1 39879750 . A . PASS END=39879750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 39879751 . G . PASS END=39879751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 39879752 . C . PASS END=39879752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 39879753 . T . PASS END=39879753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 39879754 . T . PASS END=39879754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 39879755 . C . PASS END=39879760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:16,0 chr1 39879761 . C . PASS END=39879761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 39879762 . C . PASS END=39879762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 39879763 . A . PASS END=39879769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 39879770 . A . PASS END=39879770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 39879771 . G . PASS END=39879771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39879772 . G . PASS END=39879773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,463:0,26,255:13,0 chr1 39879774 . G . PASS END=39879774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 39879775 . C . PASS END=39879775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:13,0 chr1 39879776 . C . PASS END=39879776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 39879777 . T . PASS END=39879777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 39879778 . G . PASS END=39879779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 39879780 . C . PASS END=39879780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 39879781 . T . PASS END=39879783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39879784 . C . PASS END=39879784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 39879785 . C . PASS END=39879785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39879786 . A . PASS END=39879786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 39879787 . G . PASS END=39879789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39879790 . G . PASS END=39879790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:12,0 chr1 39879791 . C . PASS END=39879795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,483:0,45,255:15,0 chr1 39879796 . G . PASS END=39879796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 39879797 . T . PASS END=39879800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 39879801 . C . PASS END=39879801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 39879802 . A . PASS END=39879812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,576:0,41,255:16,0 chr1 39879813 . G . PASS END=39879813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr1 39879814 . C . PASS END=39879816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 39879817 . G . PASS END=39879819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 39879820 . T . PASS END=39879820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:15,0 chr1 39879821 . C . PASS END=39879821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 39879822 . C . PASS END=39879825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 39879826 . G . PASS END=39879829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 39879830 . C . PASS END=39879830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:12,0 chr1 39879831 . A . PASS END=39879831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 39879832 . G . PASS END=39879832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 39879833 . C . PASS END=39879835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 39879836 . T . PASS END=39879836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:10,0 chr1 39879837 . G . PASS END=39879837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 39879838 . C . PASS END=39879841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 39879842 . C . PASS END=39879842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:12,0 chr1 39879843 . C . PASS END=39879844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 39879845 . C . PASS END=39879845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 39879846 . A . PASS END=39879846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 39879847 . G . PASS END=39879847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 39879848 . A . PASS END=39879848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 39879849 . G . PASS END=39879849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 39879850 . G . PASS END=39879853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 39879854 . C . LowGQ END=39879854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:11,0 chr1 39879855 . T . PASS END=39879855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 39879856 . G . PASS END=39879856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 39879857 . C . PASS END=39879857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 39879858 . C . PASS END=39879858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 39879859 . A . PASS END=39879859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 39879860 . T . PASS END=39879860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 39879861 . C . PASS END=39879865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr1 39879866 . C . PASS END=39879866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 39879867 . T . PASS END=39879867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 39879868 . G . PASS END=39879868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 39879869 . C . PASS END=39879869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 39879870 . T . PASS END=39879875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 39879876 . G . PASS END=39879876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 39879877 . C . PASS END=39879879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 39879880 . A . PASS END=39879880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 39879881 . C . PASS END=39879883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 39879884 . C . PASS END=39879884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr1 39879885 . A . PASS END=39879885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 39879886 . G . PASS END=39879886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 39879887 . A . PASS END=39879906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,607:0,48,255:17,0 chr1 39879907 . G . PASS END=39879907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 39879908 . C . PASS END=39879932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 39879933 . T . PASS END=39879933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 39879934 . T . PASS END=39879940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 39879941 . T . PASS END=39879941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 39879942 . T . PASS END=39879953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 39879954 . C . PASS END=39879955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 39879956 . T . PASS END=39879956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:20,0 chr1 39879957 . G . PASS END=39879986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr1 39879987 . T . PASS END=39879987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 39879988 . A . PASS END=39879989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:23,0 chr1 39879990 . T . PASS END=39879990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 39879991 . T . PASS END=39879999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 39880000 . G . PASS END=39880000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 39880001 . G . PASS END=39880039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,808:0,65,255:25,0 chr1 39880040 . G . PASS END=39880048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 39880049 . A . PASS END=39880049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 39880050 . G . PASS END=39880056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 39880057 . G . PASS END=39880060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 39880061 . C . PASS END=39880062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 39880063 . C . PASS END=39880063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 39880064 . T . PASS END=39880207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1066:0,80,255:40,0 chr1 39880208 . T . PASS END=39880221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr1 39888046 . A . PASS END=39888207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,111,1665:0,126,255:40,0 chr1 39888402 . G . PASS END=39888411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,984:0,75,255:26,0 chr1 39888412 . G . PASS END=39888412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 39888413 . A . PASS END=39888421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 39888422 . G . PASS END=39888459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:31,0 chr1 39888460 . A . PASS END=39888460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 39888461 . T . PASS END=39888513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1058:0,80,255:33,0 chr1 39888514 . A . PASS END=39888514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:31,0 chr1 39888515 . T . PASS END=39888533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1127:0,93,255:32,0 chr1 39888534 . G . PASS END=39888560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:26,0 chr1 39888561 . C . PASS END=39888561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 39888562 . A . PASS END=39888562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 39888563 . A . PASS END=39888563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:18,0 chr1 39888564 . G . PASS END=39888564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:18,0 chr1 39888565 . A . PASS END=39888572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 39889700 . T . PASS END=39889711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:26,0 chr1 39889712 . C . PASS END=39889714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1096:0,87,255:30,0 chr1 39889715 . C . PASS END=39889847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1080:0,84,255:40,0 chr1 39889848 . T . PASS END=39889866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:26:0,64,907:0,64,255:26,0 chr1 39893127 . G . PASS END=39893130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 39893131 . A . PASS END=39893283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:38:0,81,1350:0,81,255:40,0 chr1 39893284 . A . PASS END=39893284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:24,0 chr1 39893285 . A . PASS END=39893285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:57:35:0,57,855:0,105,255:19,0 chr1 39893286 . G . PASS END=39893286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,108,255:20,0 chr1 39893633 . G . PASS END=39893639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:19,0 chr1 39893640 . A . PASS END=39893655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:24,0 chr1 39893656 . C . PASS END=39893656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 39893657 . C . PASS END=39893658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 39893659 . T . PASS END=39893659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 39893660 . G . PASS END=39893660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 39893661 . C . PASS END=39893661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 39893662 . A . PASS END=39893665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 39893666 . G . PASS END=39893709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1277:0,84,255:40,0 chr1 39893710 . G . PASS END=39893710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:39,0 chr1 39893711 . A . PASS END=39893932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:41:0,81,1215:0,106,255:40,0 chr1 39893933 . C . PASS END=39893956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,939:0,62,255:26,0 chr1 39893957 . C . PASS END=39893957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 39893958 . T . PASS END=39893958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:17,0 chr1 39893959 . G . PASS END=39893959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:16,0 chr1 39894914 . G . PASS END=39894998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:76:0,120,1800:0,201,255:40,0 chr1 39895499 . G . PASS END=39895690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:37:0,84,1260:0,91,255:40,0 chr1 39895691 . G . PASS END=39895702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:29:0,63,945:0,87,255:23,0 chr1 39895703 . C . PASS END=39895722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:17:0,41,665:0,41,255:19,0 chr1 39895723 . T . PASS END=39895723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 39895724 . T . PASS END=39895740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 39896374 . G . PASS END=39896386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr1 39896387 . A . PASS END=39896388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 39896389 . G . PASS END=39896389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 39896390 . T . PASS END=39896390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 39896391 . C . PASS END=39896391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 39896392 . A . PASS END=39896401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,825:0,72,255:25,0 chr1 39896402 . G . PASS END=39896415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1260:0,87,255:33,0 chr1 39896416 . A . PASS END=39896416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:33,0 chr1 39896417 . C . PASS END=39896580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:34:0,93,1440:0,93,255:40,0 chr1 39898207 . T . PASS END=39898245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,972:0,84,255:35,0 chr1 39898246 . G . PASS END=39898246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr1 39898247 . A . PASS END=39898249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 39898250 . C . PASS END=39898250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:34,0 chr1 39898251 . A . PASS END=39898303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1272:0,81,255:39,0 chr1 39898304 . C . PASS END=39898304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 39898305 . A . PASS END=39898321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 39898322 . A . PASS END=39898326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 39898720 . G . PASS END=39898827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:39:0,94,1344:0,94,255:40,0 chr1 39900086 . G . PASS END=39900087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,970:0,60,255:29,0 chr1 39900088 . A . PASS END=39900088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr1 39900089 . A . PASS END=39900090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 39900091 . G . PASS END=39900091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:42:30:0,42,820:0,42,255:26,0 chr1 39900092 . A . PASS END=39900092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 39900093 . C . PASS END=39900093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,878:0,21,255:26,0 chr1 39900094 . A . PASS END=39900094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 39900095 . G . PASS END=39900095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,787:0,26,255:26,0 chr1 39900096 . A . PASS END=39900096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 39900097 . G . PASS END=39900097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 39900098 . T . PASS END=39900098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1023:0,63,255:29,0 chr1 39900099 . C . PASS END=39900099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1235:0,91,255:35,0 chr1 39900100 . T . PASS END=39900100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1178:0,75,255:33,0 chr1 39900101 . C . PASS END=39900101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 39900102 . T . PASS END=39900102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1135:0,61,255:34,0 chr1 39900103 . A . PASS END=39900104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1296:0,94,255:36,0 chr1 39900105 . T . PASS END=39900105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1164:0,56,255:35,0 chr1 39900106 . A . PASS END=39900106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 39900107 . C . PASS END=39900107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1228:0,72,255:36,0 chr1 39900108 . A . PASS END=39900108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 39900109 . G . LowGQ END=39900109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1084:0,0,255:33,0 chr1 39900110 . C . PASS END=39900112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:37:0,83,1246:0,83,255:37,0 chr1 39900113 . T . PASS END=39900113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1216:0,75,255:37,0 chr1 39900114 . A . PASS END=39900115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1181:0,81,255:37,0 chr1 39900116 . G . PASS END=39900116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1217:0,64,255:35,0 chr1 39900117 . A . PASS END=39900118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1268:0,97,255:37,0 chr1 39900119 . G . PASS END=39900119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1137:0,50,255:35,0 chr1 39900120 . C . PASS END=39900123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1291:0,81,255:37,0 chr1 39900124 . T . PASS END=39900125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:38:0,70,1227:0,70,255:37,0 chr1 39900126 . G . PASS END=39900138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:40:0,83,1405:0,83,255:40,0 chr1 39900139 . A . PASS END=39900139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1415:0,74,255:40,0 chr1 39900140 . G . PASS END=39900299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:39:0,81,1488:0,81,255:40,0 chr1 39900300 . T . PASS END=39900304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:37:0,63,945:0,111,255:24,0 chr1 39901230 . C . PASS END=39901420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:29:0,81,1048:0,81,255:40,0 chr1 39901421 . C . PASS END=39901430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:32:0,63,945:0,72,255:24,0 chr1 39901431 . C . PASS END=39901433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:29:0,57,855:0,87,255:19,0 chr1 39902154 . A . PASS END=39902162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,137,255:40,0 chr1 39903438 . C . PASS END=39903438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1217:0,99,255:33,0 chr1 39903449 . T . PASS END=39903449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 39903450 . T . PASS END=39903450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1181:0,66,255:33,0 chr1 39903451 . T . PASS END=39903470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1243:0,105,255:36,0 chr1 39903471 . T . PASS END=39903471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:32,0 chr1 39903472 . G . PASS END=39903537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1133:0,80,255:38,0 chr1 39903538 . C . PASS END=39903539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr1 39903540 . A . PASS END=39903545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:28,0 chr1 39903546 . G . PASS END=39903549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:30:0,78,1170:0,90,255:26,0 chr1 39903550 . G . PASS END=39903554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 39903555 . T . PASS END=39903555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 39903556 . C . PASS END=39903556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 39903557 . A . PASS END=39903557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 39903558 . G . PASS END=39903558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 39903559 . T . PASS END=39903567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1047:0,74,255:26,0 chr1 39903568 . G . PASS END=39903570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 39903571 . T . PASS END=39903629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,884:0,72,255:26,0 chr1 39903630 . A . PASS END=39903651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr1 39903652 . G . PASS END=39903652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 39903653 . G . PASS END=39903658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 39903659 . G . PASS END=39903659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 39903660 . A . PASS END=39903662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 39903663 . A . PASS END=39903663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 39903664 . G . PASS END=39903668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 39903669 . T . PASS END=39903676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 39903677 . A . PASS END=39903677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 39903678 . A . PASS END=39903680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 39904946 . A . PASS END=39904952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 39904953 . G . PASS END=39904953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39904954 . G . PASS END=39904954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 39904955 . A . PASS END=39904955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39904956 . T . PASS END=39904956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 39904957 . A . PASS END=39904971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr1 39904972 . G . PASS END=39904979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:26,0 chr1 39904980 . C . PASS END=39904985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 39904986 . G . PASS END=39904986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 39904987 . G . PASS END=39905058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1016:0,81,255:34,0 chr1 39905059 . T . PASS END=39905059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr1 39905060 . A . PASS END=39905086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1312:0,105,255:37,0 chr1 39905087 . T . PASS END=39905087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:35,0 chr1 39905088 . C . PASS END=39905116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1245:0,83,255:37,0 chr1 39905117 . T . PASS END=39905119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 39905120 . A . PASS END=39905126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:29,0 chr1 39905127 . A . PASS END=39905158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 39905159 . T . PASS END=39905159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,691:0,49,255:20,0 chr1 39905160 . T . PASS END=39905162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 39905163 . A . PASS END=39905172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:19,0 chr1 39906675 . A . PASS END=39906696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,140,255:40,0 chr1 39906697 . G . PASS END=39906797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:72:0,120,1800:0,192,255:40,0 chr1 39906896 . A . PASS END=39906997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:84:40:0,84,1260:0,120,255:40,0 chr1 39907624 . G . PASS END=39907725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:69:0,120,1800:0,191,255:40,0 chr1 39907819 . G . PASS END=39907992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,114,1682:0,114,255:40,0 chr1 39908084 . C . PASS END=39908239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:39:0,90,1350:0,96,255:40,0 chr1 39908386 . G . PASS END=39908427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,848:0,61,255:26,0 chr1 39908428 . A . PASS END=39908434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 39908435 . A . PASS END=39908435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1032:0,79,255:30,0 chr1 39908436 . C . PASS END=39908441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1161:0,80,255:31,0 chr1 39908442 . T . PASS END=39908442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 39908443 . G . PASS END=39908443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 39908444 . G . PASS END=39908444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 39908445 . C . PASS END=39908449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1123:0,80,255:30,0 chr1 39908450 . A . PASS END=39908450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 39908451 . G . PASS END=39908468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,974:0,83,255:35,0 chr1 39908469 . T . PASS END=39908505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1270:0,92,255:40,0 chr1 39908506 . G A, 41.60 PASS DP=43;MQ=250.00;MQRankSum=5.339;ReadPosRankSum=4.141;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,15,0:0.349,0.000:43:17,8,0:11,7,0:41:76,0,50,492,999,1491:255,0,255:23,0:4.1596e+01,3.2255e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,18,7,8:11,17,6,9 chr1 39908507 . C . PASS END=39908543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:37,0 chr1 39908544 . A . PASS END=39908549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 39908550 . G . PASS END=39908555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1047:0,74,255:25,0 chr1 39908556 . G . PASS END=39908556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,820:0,53,255:23,0 chr1 39908557 . C . PASS END=39908559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 39908560 . C . PASS END=39908562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39908563 . C . PASS END=39908563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 39908564 . T . PASS END=39908566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39908567 . A . PASS END=39908583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 39909118 . G . PASS END=39909238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,83,255:40,0 chr1 39909239 . C . PASS END=39909246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 39910334 . G . PASS END=39910347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,933:0,69,255:26,0 chr1 39910348 . G . PASS END=39910360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 39910361 . G . PASS END=39910365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 39910366 . G . PASS END=39910371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 39910372 . T . PASS END=39910373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 39910374 . A . PASS END=39910377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 39910378 . A . PASS END=39910378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,850:0,34,255:28,0 chr1 39910379 . C . PASS END=39910387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 39910388 . A . PASS END=39910388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 39910389 . A . PASS END=39910415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 39910416 . A . PASS END=39910421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 39910422 . C . PASS END=39910436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:29,0 chr1 39910437 . A . PASS END=39910437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr1 39910438 . G . PASS END=39910443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:30,0 chr1 39910444 . A . PASS END=39910455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:29:0,69,1024:0,71,255:26,0 chr1 39910456 . A . PASS END=39910457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr1 39910458 . T . PASS END=39910458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:23,0 chr1 39910459 . T . PASS END=39910480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,66,255:23,0 chr1 39910481 . G . PASS END=39910481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 39910482 . T . PASS END=39910487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,742:0,66,255:22,0 chr1 39910488 . G . PASS END=39910488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 39910489 . T . PASS END=39910506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 39910507 . G . PASS END=39910507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 39913104 . T . PASS END=39913259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:39:0,93,1360:0,100,255:40,0 chr1 39913364 . G . PASS END=39913561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:35:0,87,1288:0,92,255:40,0 chr1 39913562 . G . PASS END=39913562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr1 39913563 . C . PASS END=39913570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 39913705 . T . PASS END=39913824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,99,1485:0,108,255:40,0 chr1 39914266 . G . PASS END=39914274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:17,0 chr1 39914275 . A . PASS END=39914275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 39914276 . A . PASS END=39914281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,682:0,57,255:19,0 chr1 39914282 . T . PASS END=39914295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:26,0 chr1 39914296 . C . PASS END=39914325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1033:0,84,255:40,0 chr1 39914326 . A . PASS END=39914362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,101,1512:0,101,255:40,0 chr1 39914363 . G C, 184.99 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,24,0:0,22,0:135:223,138,0,1738,138,1738:255,138,0:0,0:1.8499e+02,1.3499e+02,0.0000e+00,4.5000e+02,1.6976e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,21:0,0,25,21 chr1 39914364 . T . PASS END=39914400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,103,1497:0,103,255:40,0 chr1 39914401 . A . PASS END=39914421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:36:0,96,1440:0,108,255:38,0 chr1 39914422 . A . PASS END=39914422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:31,0 chr1 39914423 . A . PASS END=39914435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:31,0 chr1 39916724 . G . PASS END=39916736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 39916737 . G . PASS END=39916737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:18,0 chr1 39916738 . A . PASS END=39916742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 39916743 . G . PASS END=39916743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:18,0 chr1 39916744 . C . PASS END=39916744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 39916745 . C . PASS END=39916745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 39916746 . C . PASS END=39916746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 39916747 . T . PASS END=39916749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 39916750 . T . PASS END=39916750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,631:0,32,255:18,0 chr1 39916751 . C . PASS END=39916751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 39916752 . T . PASS END=39916752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,627:0,5,255:17,0 chr1 39916753 . T . PASS END=39916757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:18,0 chr1 39916758 . G . PASS END=39916758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 39916759 . G . PASS END=39916764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,646:0,41,255:18,0 chr1 39916765 . T . PASS END=39916765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,681:0,16,255:17,0 chr1 39916766 . C . PASS END=39916767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,784:0,52,255:19,0 chr1 39916768 . T . PASS END=39916769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 39916770 . G . PASS END=39916770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 39916771 . A . PASS END=39916771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 39916772 . T . PASS END=39916772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:20,0 chr1 39916773 . G . PASS END=39916773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 39916774 . C . PASS END=39916774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 39916775 . T . PASS END=39916775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,763:0,69,255:23,0 chr1 39916776 . T . PASS END=39916778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 39916779 . C . PASS END=39916779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 39916780 . A . PASS END=39916792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 39916793 . C . PASS END=39916793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 39916794 . T . PASS END=39916800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 39916801 . A . PASS END=39916801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,790:0,28,255:23,0 chr1 39916802 . C . PASS END=39916802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 39916803 . A . PASS END=39916812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:30,0 chr1 39916813 . C . PASS END=39916813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 39916814 . A . PASS END=39916834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1066:0,90,255:30,0 chr1 39916835 . C . PASS END=39916835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 39916836 . G . PASS END=39916839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 39916840 . A . PASS END=39916840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr1 39916841 . C . PASS END=39916841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 39916842 . G . PASS END=39916866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,68,255:25,0 chr1 39916867 . T . PASS END=39916867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 39916868 . C . PASS END=39916875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,726:0,66,255:22,0 chr1 39916876 . C . PASS END=39916883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,49,255:19,0 chr1 39917828 . G . PASS END=39917834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 39917835 . A . PASS END=39917840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:23,0 chr1 39917841 . A . PASS END=39917841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 39917842 . A . PASS END=39917852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 39917853 . G . PASS END=39917853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 39917854 . A . PASS END=39917856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 39917857 . A . PASS END=39917857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 39917858 . G . PASS END=39917864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 39917865 . T . PASS END=39917879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,964:0,80,255:32,0 chr1 39917880 . G . PASS END=39917880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 39917881 . G . PASS END=39917886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:31,0 chr1 39917887 . C . PASS END=39917887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr1 39917888 . C . PASS END=39917896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 39917897 . A . PASS END=39917897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr1 39917898 . T . PASS END=39917902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 39917903 . A . PASS END=39917903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:26:32:0,26,1011:0,26,255:25,0 chr1 39917904 . A . PASS END=39917904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 39917905 . T . PASS END=39917906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 39917907 . G . PASS END=39917936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:33,0 chr1 39917937 . A . PASS END=39917937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 39917938 . G . PASS END=39917942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 39917943 . A . PASS END=39917953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 39917954 . A . PASS END=39917954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:23,0 chr1 39917955 . C . PASS END=39917965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 39917966 . A . PASS END=39917967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 39917968 . T . PASS END=39917968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 39917969 . G . PASS END=39917976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 39917977 . A . PASS END=39918009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr1 39918010 . G . PASS END=39918019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,62,255:19,0 chr1 39918020 . C . PASS END=39918022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 39918356 . G . PASS END=39918358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 39918359 . G . PASS END=39918359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 39918360 . A . PASS END=39918362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 39918363 . T . PASS END=39918363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 39918364 . G . PASS END=39918365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 39918366 . T . PASS END=39918367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:73:30:0,73,1025:0,73,255:30,0 chr1 39918368 . C . PASS END=39918368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 39918369 . G . PASS END=39918369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 39918370 . A . PASS END=39918472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:32:0,80,1169:0,80,255:40,0 chr1 39918473 . G . PASS END=39918474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:31,0 chr1 39918475 . C . PASS END=39918475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 39918476 . A . PASS END=39918484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,990:0,66,255:25,0 chr1 39919379 . G . PASS END=39919389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr1 39919390 . G . PASS END=39919406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1046:0,90,255:30,0 chr1 39919407 . G . PASS END=39919407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr1 39919408 . A . PASS END=39919522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:30:0,89,1075:0,89,255:40,0 chr1 39920581 . G . PASS END=39920603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,839:0,69,255:26,0 chr1 39920604 . C . PASS END=39920612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:31,0 chr1 39920613 . T . PASS END=39920613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 39920614 . C . PASS END=39920754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1166:0,83,255:40,0 chr1 39920755 . A . PASS END=39920755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 39920756 . T . PASS END=39920760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 39920761 . G . PASS END=39920769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:26,0 chr1 39924042 . A . PASS END=39924162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:33:0,87,1305:0,91,255:40,0 chr1 39924758 . G . PASS END=39924758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 39924759 . G . PASS END=39924759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 39924760 . A . PASS END=39924760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 39924761 . A . PASS END=39924761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 39924762 . A . PASS END=39924762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 39924763 . T . PASS END=39924763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 39924764 . C . PASS END=39924766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 39924767 . T . PASS END=39924767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 39924768 . A . PASS END=39924769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 39924770 . G . PASS END=39924770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,959:0,32,255:27,0 chr1 39924771 . T . PASS END=39924771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 39924772 . C . PASS END=39924777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1047:0,60,255:29,0 chr1 39924778 . A . PASS END=39924921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1020:0,90,255:40,0 chr1 39925490 . C . PASS END=39925504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:85:0,120,1800:0,212,255:40,0 chr1 39926304 . T . PASS END=39926459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1131:0,91,255:40,0 chr1 39926460 . G . PASS END=39926460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:28,0 chr1 39926461 . C . PASS END=39926466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 39927555 . A . PASS END=39927555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1227:0,67,255:33,0 chr1 39927556 . G . PASS END=39927577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:93:43:0,93,1471:0,93,255:40,0 chr1 39927578 . A . PASS END=39927692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:32:0,87,1294:0,92,255:40,0 chr1 39927693 . A . PASS END=39927693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:27,0 chr1 39927694 . T . PASS END=39927694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 39927695 . A . PASS END=39927695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 39927696 . A . PASS END=39927700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 39927701 . G . PASS END=39927709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,900:0,70,255:26,0 chr1 39929284 . G . PASS END=39929358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,110,1504:0,110,255:40,0 chr1 39930767 . T . PASS END=39930784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,252,255:40,0 chr1 39934287 . T . PASS END=39934287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,920:0,62,255:30,0 chr1 39934288 . T . PASS END=39934404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:32:0,83,1142:0,83,255:40,0 chr1 39935219 . T . PASS END=39935287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:71:0,115,1800:0,115,255:40,0 chr1 39945470 . C . PASS END=39945472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 39945473 . G . PASS END=39945473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 39945474 . A . PASS END=39945474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 39945475 . G . PASS END=39945475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 39945476 . G . PASS END=39945484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,839:0,61,255:26,0 chr1 39945485 . A . PASS END=39945487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:28,0 chr1 39945488 . T . PASS END=39945488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 39945489 . T . PASS END=39945490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 39945491 . A . PASS END=39945491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 39945492 . A . PASS END=39945502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,912:0,84,255:29,0 chr1 39945503 . A . PASS END=39945503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 39945504 . A . PASS END=39945635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:32:0,88,1234:0,88,255:40,0 chr1 39945636 . T . PASS END=39945636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:32,0 chr1 39945637 . A . PASS END=39945642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:34:0,93,1395:0,102,255:32,0 chr1 39945643 . A . PASS END=39945643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1201:0,64,255:30,0 chr1 39945644 . T . PASS END=39945663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1210:0,86,255:31,0 chr1 39945664 . C . PASS END=39945678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:26,0 chr1 39945679 . A . PASS END=39945679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:48:27:0,48,720:0,64,255:16,0 chr1 39945680 . A . PASS END=39945680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,869:0,26,255:15,0 chr1 39945681 . G . PASS END=39945681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:48:27:0,48,720:0,64,255:15,0 chr1 39946592 . A . PASS END=39946595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 39946596 . C . PASS END=39946597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 39946598 . C . PASS END=39946598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:27,0 chr1 39946599 . T . PASS END=39946601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 39946602 . A . PASS END=39946602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 39946603 . G . PASS END=39946604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 39946605 . T . PASS END=39946605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,928:0,76,255:29,0 chr1 39946606 . C . PASS END=39946700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1082:0,81,255:40,0 chr1 39946701 . A . PASS END=39946702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:38:0,78,1170:0,98,255:25,0 chr1 39950273 . G . PASS END=39950335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:32:0,85,1150:0,85,255:38,0 chr1 39950336 . T . PASS END=39950336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:31,0 chr1 39950337 . C . PASS END=39950337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:31,0 chr1 39950338 . C . PASS END=39950339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:30,0 chr1 39950340 . T . PASS END=39950378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:35,0 chr1 39950379 . C . PASS END=39950398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,967:0,65,255:26,0 chr1 39950399 . G . PASS END=39950402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:26:0,48,720:0,78,255:18,0 chr1 39951210 . A . PASS END=39951237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:13,0 chr1 39951238 . G . PASS END=39951296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 39951297 . C . PASS END=39951297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 39951298 . T . PASS END=39951312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 39951313 . A . PASS END=39951340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 39951341 . T . PASS END=39951347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 39951348 . G . PASS END=39951348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:14,0 chr1 39951349 . C . PASS END=39951361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,596:0,41,255:19,0 chr1 39951362 . G . PASS END=39951370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr1 39951371 . A . PASS END=39951371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 39951372 . A . PASS END=39951383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,922:0,62,255:25,0 chr1 39951384 . G . PASS END=39951384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr1 39951385 . G . PASS END=39951405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1000:0,78,255:26,0 chr1 39951406 . C . PASS END=39951406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 39951407 . C . PASS END=39951427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:25,0 chr1 39951428 . A . PASS END=39951466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,50,255:19,0 chr1 39955694 . C . PASS END=39955710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 39955711 . C . PASS END=39955719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 39955720 . T . PASS END=39955720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 39955721 . G . PASS END=39955725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 39955726 . G . PASS END=39955726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 39955727 . A . PASS END=39955769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr1 39955770 . A . PASS END=39955770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,713:0,32,255:20,0 chr1 39955771 . G . PASS END=39955773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 39955774 . A . PASS END=39955774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 39955775 . A . PASS END=39955775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 39955776 . T . PASS END=39955776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 39955777 . T . PASS END=39955777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 39955778 . T . PASS END=39955799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:19,0 chr1 39956361 . C . PASS END=39956389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,692:0,54,255:19,0 chr1 39956390 . A . PASS END=39956395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 39956396 . C . PASS END=39956399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 39956400 . G . PASS END=39956401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 39956402 . G . PASS END=39956402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 39956403 . C . PASS END=39956403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,795:0,36,255:21,0 chr1 39956404 . A . PASS END=39956416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:24,0 chr1 39956417 . T . PASS END=39956417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 39956418 . C . PASS END=39956421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 39956422 . T . PASS END=39956422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 39956423 . T . PASS END=39956443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 39956444 . A . PASS END=39956444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 39956445 . G . PASS END=39956461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,930:0,62,255:24,0 chr1 39956462 . A . PASS END=39956462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,726:0,58,255:22,0 chr1 39956463 . G . PASS END=39956486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 39956487 . G . PASS END=39956489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 39956490 . G . PASS END=39956523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:23,0 chr1 39956524 . G . PASS END=39956524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 39956525 . G . PASS END=39956530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 39956531 . T . PASS END=39956531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr1 39956532 . C . PASS END=39956540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,840:0,72,255:25,0 chr1 39956541 . G . PASS END=39956553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 39956554 . G . PASS END=39956554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 39956555 . C . PASS END=39956560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 39956561 . G . PASS END=39956585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 39956586 . C . PASS END=39956586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:23,0 chr1 39956587 . T . PASS END=39956615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 39956616 . T . PASS END=39956616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 39956617 . T . PASS END=39956622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 39956623 . C . PASS END=39956632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 39956633 . G . PASS END=39956635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 39956636 . G . PASS END=39956656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 39956657 . A . PASS END=39956657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr1 39956658 . A . PASS END=39956659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 39956660 . C . PASS END=39956660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 39956661 . T . PASS END=39956666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 39956667 . A . PASS END=39956667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 39956668 . G . PASS END=39956689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:18,0 chr1 39956690 . A . PASS END=39956721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:23,0 chr1 39956722 . C . PASS END=39956725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 39956726 . G . PASS END=39956739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:22,0 chr1 39956740 . G . PASS END=39956747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 39956748 . G . PASS END=39956779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:26,0 chr1 39956780 . G . PASS END=39956815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,892:0,61,255:25,0 chr1 39956816 . G . PASS END=39956816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 39956817 . G A, 22.94 PASS DP=25;MQ=250.00;MQRankSum=3.932;ReadPosRankSum=3.175;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,8,0:0.320,0.000:25:7,6,0:10,2,0:23:58,0,50,286,604,890:238,0,255:13,0:2.2936e+01,2.2170e-02,5.3022e+01,2.8619e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,0,8:9,8,2,6 chr1 39956818 . G . PASS END=39956854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,861:0,66,255:23,0 chr1 39956855 . G . PASS END=39956888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,847:0,66,255:23,0 chr1 39956889 . A . PASS END=39956912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr1 39956913 . T . PASS END=39956936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:12,0 chr1 39956937 . A . PASS END=39956937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 39956938 . G . PASS END=39956944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 39957273 . A . PASS END=39957290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 39957291 . A . PASS END=39957291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 39957292 . A . PASS END=39957297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 39957298 . C . PASS END=39957300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 39957301 . G A, 50.00 PASS DP=7;MQ=250.00;MQRankSum=1.754;ReadPosRankSum=0.937;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,4,0:0.571,0.000:7:3,2,0:0,2,0:48:85,0,50,135,107,242:126,0,95:3,0:5.0000e+01,6.6786e-05,5.2689e+01,1.3502e+02,1.4206e+02,2.4530e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,3,1:1,2,1,3 chr1 39957302 . G . PASS END=39957311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr1 39957312 . C . PASS END=39957312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 39957313 . G . PASS END=39957336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 39957337 . C . PASS END=39957337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 39957338 . G . PASS END=39957338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 39957339 . G . PASS END=39957342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 39957343 . C . PASS END=39957378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr1 39957379 . G . PASS END=39957388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 39957389 . G . PASS END=39957416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,676:0,54,255:19,0 chr1 39957417 . C . PASS END=39957417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 39957418 . C . PASS END=39957435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr1 39957436 . C . PASS END=39957447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 39957448 . G . PASS END=39957448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr1 39957449 . T . PASS END=39957467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 39957468 . C . PASS END=39957468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 39957469 . A . PASS END=39957482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 39957483 . C . PASS END=39957489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 39957490 . C . LowGQ END=39957490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:7,0 chr1 39957491 . G . PASS END=39957507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 39957508 . G . PASS END=39957517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,255:4,0 chr1 39957518 . A . PASS END=39957519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:9:8:0,9,135:0,24,255:3,0 chr1 39957520 . G . PASS END=39957524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:4,0 chr1 39957525 . G . LowGQ END=39957525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 39957526 . C . PASS END=39957555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 39957556 . C . PASS END=39957558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 39957559 . G . PASS END=39957589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 39957590 . C . PASS END=39957608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 39957609 . G . PASS END=39957625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 39957626 . G . PASS END=39957628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 39957629 . G . PASS END=39957631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 39957632 . G . PASS END=39957650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 39957651 . C . PASS END=39957654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 39957655 . C . PASS END=39957668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 39957669 . C G, 50.02 PASS DP=6;MQ=232.91;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,5,0:0.833,0.000:6:1,3,0:0,2,0:24:85,0,21,179,36,215:168,0,21:1,0:5.0018e+01,1.8481e-02,2.3730e+01,1.7886e+02,7.0549e+01,2.1762e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,2,3:0,1,2,3 chr1 39957670 . G . PASS END=39957678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 39957679 . G . PASS END=39957706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 39957707 . T . PASS END=39957729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 39957730 . C . PASS END=39957742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,227:6,0 chr1 39957743 . C . PASS END=39957744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 39957745 . C . PASS END=39957764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:6,0 chr1 39957765 . A . LowGQ END=39957839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,16:3,0 chr1 39957840 . G . PASS END=39957853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 39957854 . C . LowGQ END=39957854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 39957855 . C . PASS END=39957875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 39957876 . G . PASS END=39957908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr1 39957909 . C . PASS END=39957909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 39957910 . G . PASS END=39957912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 39957913 . A G, 44.38 PASS DP=6;MQ=72.76;MQRankSum=1.537;ReadPosRankSum=0.988;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,3,0:0.500,0.000:6:2,1,0:1,2,0:41:79,0,41,107,107,214:98,0,76:2,0:4.4375e+01,3.2669e-04,4.4125e+01,1.0715e+02,1.4197e+02,2.1735e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,2,1:0,3,2,1 chr1 39957914 . T . PASS END=39957950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 39957951 . G . PASS END=39957975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,164:6,0 chr1 39957976 . G . LowGQ END=39957997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:3:0,0,70:0,0,96:3,0 chr1 39976846 . T . PASS END=39976847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 39976848 . G . PASS END=39976848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 39976849 . A . PASS END=39976856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,227:0,24,227:8,0 chr1 39976857 . C . PASS END=39976861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,243:6,0 chr1 39976862 . C . PASS END=39976862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 39976863 . C . PASS END=39976864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 39976865 . G . PASS END=39976884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 39976885 . G . PASS END=39976885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 39976886 . G . PASS END=39976891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 39976892 . G . PASS END=39976892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 39976893 . T . PASS END=39976932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,243:8,0 chr1 39976933 . T . PASS END=39976933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 39976934 . C . PASS END=39976937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 39976938 . G . PASS END=39976938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 39976939 . C . PASS END=39976980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 39976981 . T . PASS END=39976986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 39976987 . G . PASS END=39977009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,172:6,0 chr1 39977010 . C . PASS END=39977010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 39977011 . A . PASS END=39977013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr1 39977014 . T . LowGQ END=39977035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:2:0,0,55:0,0,55:3,0 chr1 39977428 . G . PASS END=39977430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 39977431 . G . PASS END=39977455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 39977456 . C . PASS END=39977469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 39977470 . T . PASS END=39977490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 39977491 . G . PASS END=39977491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 39977492 . C . PASS END=39977525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 39977526 . T . PASS END=39977526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 39977527 . G . PASS END=39977537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 39977538 . A . PASS END=39977550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 39977551 . C . PASS END=39977574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 39977575 . C T, 23.57 PASS DP=4;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,4,0:1.000,0.000:4:0,4,0:0,0,0:9:61,12,0,155,12,155:155,12,0:0,0:2.3569e+01,9.5688e+00,5.2993e-01,1.5264e+02,4.4339e+01,1.5564e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,4:0,0,0,4 chr1 39977576 . G . PASS END=39977576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 39977981 . G . LowDepth;LowGQ END=39978018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 39978180 . C . PASS END=39978202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,55:2,0 chr1 39986857 . G . PASS END=39986858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 39986859 . G . PASS END=39986860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 39986861 . G . PASS END=39986866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 39986867 . G . PASS END=39986870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 39986871 . G . PASS END=39986876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:53:19:0,53,690:0,53,255:22,0 chr1 39986877 . G . PASS END=39986880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 39986881 . G . PASS END=39986881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 39986882 . G . PASS END=39986903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr1 39986904 . A T, 27.79 PASS DP=26;MQ=22.67;MQRankSum=2.128;ReadPosRankSum=2.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:5,4,0:10,7,0:26:63,0,29,385,492,877:255,0,255:15,0:2.7787e+01,9.9742e-03,3.2010e+01,3.8541e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,2,8,3:5,10,7,4 chr1 39986905 . T . PASS END=39986941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,994:0,81,255:40,0 chr1 39986942 . C . PASS END=39987020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,111,1800:0,111,255:40,0 chr1 39987048 . G . PASS END=39987112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:36:0,96,1440:0,108,255:40,0 chr1 39987113 . T . PASS END=39987113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1132:0,72,255:30,0 chr1 39987114 . T . PASS END=39987134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1241:0,86,255:33,0 chr1 39987135 . C . PASS END=39987139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,92,255:26,0 chr1 39987140 . C . PASS END=39987141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:27,0 chr1 39987142 . G . PASS END=39987142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 39987143 . A . PASS END=39987144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 39987145 . T . PASS END=39987154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:24,0 chr1 39987155 . A . PASS END=39987163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr1 39987164 . G . PASS END=39987166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 39987167 . G . PASS END=39987181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,50,255:19,0 chr1 39987182 . A . PASS END=39987182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:16,0 chr1 39987183 . G . PASS END=39987186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 39987187 . G . PASS END=39987187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:16,0 chr1 39987188 . C . PASS END=39987192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 39987193 . G . PASS END=39987193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 39987194 . A . PASS END=39987206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,615:0,51,255:17,0 chr1 39987207 . A . PASS END=39987208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 39987209 . C . PASS END=39987213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr1 39987214 . G . PASS END=39987225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,565:0,32,255:13,0 chr1 39987226 . A . PASS END=39987226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 39987227 . C . PASS END=39987227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 39987228 . T . PASS END=39987229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 39987230 . C . PASS END=39987230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 39987231 . C . PASS END=39987231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 39987232 . A . PASS END=39987238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 39987239 . T . PASS END=39987239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 39987240 . T . PASS END=39987242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 39988075 . A . PASS END=39988083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,120,1800:0,126,255:40,0 chr1 39988084 . G A, 14.31 PASS DP=49;MQ=63.42;MQRankSum=-2.121;ReadPosRankSum=-0.755;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,11,0:0.224,0.000:49:21,7,0:17,4,0:14:49,0,46,328,1359,1686:219,0,255:37,0:1.4311e+01,1.6408e-01,4.8964e+01,3.2779e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,11,8,3:22,16,6,5 chr1 39988085 . C . PASS END=39988144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,114,1721:0,114,255:40,0 chr1 39988145 . T C, 35.13 PASS DP=48;MQ=63.04;MQRankSum=-3.083;ReadPosRankSum=3.859;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,17,0:0.354,0.000:48:19,11,0:12,6,0:35:70,0,46,600,1093,1693:255,0,255:30,0:3.5128e+01,1.3908e-03,4.8801e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,9,8:17,14,13,4 chr1 39988146 . G . PASS END=39988154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,103,1722:0,103,255:40,0 chr1 39988679 . G . PASS END=39988789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:40:0,90,1372:0,90,255:40,0 chr1 39991321 . G . PASS END=39991327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr1 39991328 . T . PASS END=39991328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:18,0 chr1 39991329 . G . PASS END=39991334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 39991335 . G . PASS END=39991335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 39991336 . C . PASS END=39991341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 39991342 . G . PASS END=39991342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 39991343 . C . PASS END=39991344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 39991345 . G . PASS END=39991345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 39991346 . T . PASS END=39991352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 39991353 . G . PASS END=39991353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 39991354 . G . PASS END=39991362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,930:0,62,255:25,0 chr1 39991363 . G . PASS END=39991363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39991364 . C . PASS END=39991364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 39991365 . A . PASS END=39991365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr1 39991366 . C . PASS END=39991369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1061:0,71,255:26,0 chr1 39991370 . C . PASS END=39991373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 39991374 . G . PASS END=39991374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 39991375 . C . PASS END=39991375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 39991376 . T . PASS END=39991376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 39991377 . G . PASS END=39991385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1039:0,84,255:32,0 chr1 39991386 . C . PASS END=39991386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr1 39991387 . T . PASS END=39991392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 39991393 . C . PASS END=39991393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:27,0 chr1 39991394 . T . PASS END=39991396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:28,0 chr1 39991397 . A . PASS END=39991397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:28,0 chr1 39991398 . C . PASS END=39991401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:29,0 chr1 39991402 . G . PASS END=39991402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:29,0 chr1 39991403 . A . PASS END=39991411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1119:0,83,255:31,0 chr1 39991412 . A . PASS END=39991417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 39991418 . T . PASS END=39991418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 39991419 . C . PASS END=39991449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 39991450 . A . PASS END=39991469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,637:0,51,255:18,0 chr1 39991470 . A . PASS END=39991470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 40026777 . T . PASS END=40026794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr1 40027370 . C . PASS END=40027375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 40027376 . G . PASS END=40027377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40027378 . T . PASS END=40027378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 40027379 . A . PASS END=40027385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 40027386 . G . PASS END=40027386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 40027387 . C . PASS END=40027394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 40027395 . C . PASS END=40027395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 40027396 . C . PASS END=40027397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 40027398 . A . PASS END=40027426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 40027427 . A . PASS END=40027437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 40027438 . G . PASS END=40027438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 40027439 . A . PASS END=40027453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 40027454 . A . PASS END=40027456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 40027457 . C . PASS END=40027459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40027745 . C . PASS END=40027754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1211:0,102,255:34,0 chr1 40027755 . A . PASS END=40027755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr1 40027756 . G . PASS END=40027763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,91,255:33,0 chr1 40027764 . G . PASS END=40027764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:31,0 chr1 40027765 . G . PASS END=40027875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:36:0,96,1440:0,108,255:40,0 chr1 40027995 . C . PASS END=40028088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:39:0,89,1530:0,89,255:40,0 chr1 40029286 . C . PASS END=40029294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 40029295 . C . PASS END=40029298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr1 40029299 . A . PASS END=40029299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 40029300 . T . PASS END=40029305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 40029306 . G . PASS END=40029306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 40029307 . A . PASS END=40029309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 40029310 . A . PASS END=40029310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 40029311 . G . PASS END=40029413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1233:0,86,255:40,0 chr1 40029508 . C . PASS END=40029594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:40:0,81,1215:0,108,255:40,0 chr1 40030095 . C . PASS END=40030095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 40030096 . G . PASS END=40030108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,545:0,45,255:19,0 chr1 40030109 . G . PASS END=40030156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:27,0 chr1 40030157 . T . PASS END=40030162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 40030163 . A . PASS END=40030170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 40030171 . A . PASS END=40030171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40030172 . C . PASS END=40030172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 40030173 . G . PASS END=40030173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:25,0 chr1 40030174 . A . PASS END=40030174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 40030175 . G . PASS END=40030182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40030183 . C . PASS END=40030207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,847:0,69,255:26,0 chr1 40030208 . T . PASS END=40030208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 40030209 . G . PASS END=40030214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 40030358 . C . PASS END=40030445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,111,1665:0,125,255:40,0 chr1 40030778 . C . PASS END=40030790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 40030791 . G . PASS END=40030797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:31,0 chr1 40030798 . A . PASS END=40030798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr1 40030799 . G . PASS END=40030901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1149:0,83,255:40,0 chr1 40030902 . C . PASS END=40030902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1233:0,57,255:37,0 chr1 40030903 . T . PASS END=40031017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1178:0,86,255:40,0 chr1 40031018 . A . PASS END=40031033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,62,255:26,0 chr1 40031034 . C . PASS END=40031035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,65,255:19,0 chr1 40031036 . A . PASS END=40031039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,67,255:21,0 chr1 40031040 . T . PASS END=40031040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:19,0 chr1 40031041 . C . PASS END=40031043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 40031044 . G . PASS END=40031044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 40031045 . C . PASS END=40031050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 40033423 . C . PASS END=40033518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,165,255:40,0 chr1 40034474 . C . PASS END=40034611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:87:50:0,87,1305:0,118,255:40,0 chr1 40035267 . C . PASS END=40035361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,99,1485:0,110,255:40,0 chr1 40035535 . C . PASS END=40035674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:33:0,93,1219:0,93,255:40,0 chr1 40036902 . T . PASS END=40037021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:37:0,90,1260:0,90,255:40,0 chr1 40037279 . A . PASS END=40037323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,380:0,33,255:13,0 chr1 40037324 . G . PASS END=40037347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 40037348 . C . PASS END=40037348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 40037349 . C . PASS END=40037350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 40037351 . G . PASS END=40037352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40037353 . T . PASS END=40037353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 40037354 . C . PASS END=40037356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 40037357 . T . PASS END=40037357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 40037358 . G . PASS END=40037361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 40037362 . A . PASS END=40037362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr1 40037363 . A . PASS END=40037377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr1 40038065 . C . PASS END=40038255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:86:34:0,86,1233:0,86,255:40,0 chr1 40038256 . C . PASS END=40038258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,101,255:26,0 chr1 40041431 . C . PASS END=40041458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,674:0,54,255:18,0 chr1 40041459 . G . PASS END=40041507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,922:0,62,255:29,0 chr1 40041508 . G . PASS END=40041529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 40041530 . T . PASS END=40041531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 40041532 . A . PASS END=40041536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 40041537 . T . PASS END=40041537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:28,0 chr1 40041538 . T . PASS END=40041542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 40041543 . C . PASS END=40041544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 40041545 . G . PASS END=40041545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:25,0 chr1 40041546 . C . PASS END=40041594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,947:0,72,255:26,0 chr1 40041595 . A . PASS END=40041612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 40041613 . G . PASS END=40041613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 40041614 . C . PASS END=40041619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 40041620 . T . PASS END=40041623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,580:0,37,255:13,0 chr1 40092179 . T . PASS END=40092186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 40092187 . C . PASS END=40092197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 40092198 . G . PASS END=40092208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40092209 . G . PASS END=40092220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:17,0 chr1 40092221 . G . PASS END=40092228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 40092229 . T . PASS END=40092229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 40092230 . G . PASS END=40092250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 40092251 . T . PASS END=40092286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 40092287 . C . PASS END=40092287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 40092288 . A . PASS END=40092331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:17,0 chr1 40092332 . A . PASS END=40092332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 40092333 . G . PASS END=40092337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 40092338 . C . PASS END=40092339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 40092340 . G . PASS END=40092343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 40092344 . G . PASS END=40092344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 40092345 . G . PASS END=40092346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 40092347 . A . PASS END=40092347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 40092348 . G . PASS END=40092349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 40092350 . G . PASS END=40092350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 40092351 . A . PASS END=40092372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 40092373 . T . PASS END=40092381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 40092382 . G . PASS END=40092408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr1 40092409 . T . PASS END=40092411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 40092412 . C . PASS END=40092466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:19,0 chr1 40092467 . C . PASS END=40092473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 40092474 . G . PASS END=40092478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 40092479 . G . PASS END=40092481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40092482 . G . PASS END=40092484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 40092485 . G . PASS END=40092489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40092490 . T . PASS END=40092494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 40092495 . C . PASS END=40092521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,754:0,66,255:22,0 chr1 40092522 . G . PASS END=40092522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 40092523 . G . PASS END=40092528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:24,0 chr1 40092529 . G . PASS END=40092529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr1 40092530 . G . PASS END=40092545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,862:0,61,255:26,0 chr1 40092546 . A . PASS END=40092546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:27,0 chr1 40092547 . C . PASS END=40092555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 40092556 . G . PASS END=40092578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1140:0,93,255:31,0 chr1 40092579 . A . PASS END=40092579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 40092580 . G . PASS END=40092603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 40092604 . C . PASS END=40092606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:29,0 chr1 40092607 . G . PASS END=40092607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 40092608 . C . PASS END=40092608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:27,0 chr1 40092609 . A . PASS END=40092610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:47:34:0,47,1147:0,47,255:29,0 chr1 40092611 . C . PASS END=40092613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:63:34:0,63,1172:0,63,255:30,0 chr1 40092614 . T . PASS END=40092615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:30,0 chr1 40092616 . G . PASS END=40092616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr1 40092617 . A . PASS END=40092640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1147:0,80,255:34,0 chr1 40092641 . C . PASS END=40092641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:30,0 chr1 40092642 . C . PASS END=40092653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:34,0 chr1 40092654 . G . PASS END=40092654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 40092655 . C . PASS END=40092691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1217:0,86,255:35,0 chr1 40092692 . G . PASS END=40092692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:32,0 chr1 40092693 . G . PASS END=40092779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:36:0,82,1322:0,82,255:40,0 chr1 40092780 . A . PASS END=40092780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 40092781 . T . PASS END=40092841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1133:0,80,255:37,0 chr1 40092842 . A . PASS END=40092842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:27,0 chr1 40092843 . T . PASS END=40092844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 40092845 . A . PASS END=40092845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 40092846 . A . PASS END=40092852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 40095899 . C . PASS END=40095980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:43:0,113,1529:0,113,255:40,0 chr1 40097168 . C . PASS END=40097251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1291:0,90,255:40,0 chr1 40098321 . C . PASS END=40098327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 40098328 . T C, 97.70 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,8,0:0,9,0:48:135,51,0,630,51,630:255,51,0:0,0:9.7704e+01,4.7704e+01,7.3776e-05,4.5000e+02,8.2474e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,7:0,0,9,8 chr1 40098329 . G . PASS END=40098336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:18,0 chr1 40098337 . C . PASS END=40098337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 40098338 . T . PASS END=40098354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 40098355 . G . PASS END=40098358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 40098359 . T . PASS END=40098365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 40098366 . G . PASS END=40098387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,698:0,57,255:19,0 chr1 40105218 . C . PASS END=40105274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,803:0,69,255:26,0 chr1 40105275 . C . PASS END=40105275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,1 chr1 40105276 . T . PASS END=40105289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 40105290 . C . PASS END=40105290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 40105291 . G . PASS END=40105293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 40105294 . T . PASS END=40105295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 40105296 . A . PASS END=40105297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 40124793 . C . PASS END=40124797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 40124798 . G . PASS END=40124807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 40124808 . G . PASS END=40124813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 40124814 . C . PASS END=40124821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40124822 . G . PASS END=40124850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:19,0 chr1 40124851 . C . PASS END=40124853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 40124854 . T . PASS END=40124854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 40124855 . A . PASS END=40124884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:25,0 chr1 40124885 . C . PASS END=40124897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 40124898 . C . PASS END=40124901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40124902 . T . PASS END=40124902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40124903 . G . PASS END=40124905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 40124906 . A . PASS END=40124922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 40124923 . A . PASS END=40124923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 40124924 . A . PASS END=40124926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 40124927 . T . PASS END=40124927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 40124928 . G . PASS END=40124931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 40124932 . G . PASS END=40124932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 40124933 . G . PASS END=40124937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 40124938 . A . PASS END=40124939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 40124940 . C . PASS END=40124940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40124941 . T . PASS END=40124943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 40124944 . T . PASS END=40124944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:25,2 chr1 40124945 . C . PASS END=40124945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,970:0,21,255:26,2 chr1 40124946 . A . PASS END=40124946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:26,0 chr1 40124947 . A . PASS END=40124948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 40124949 . G . PASS END=40124951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40124952 . A . PASS END=40124982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,845:0,69,255:26,0 chr1 40124983 . G . PASS END=40124983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 40124984 . C . PASS END=40124989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40124990 . C . PASS END=40125036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 40125037 . G . PASS END=40125040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:15,0 chr1 40125041 . T . PASS END=40125052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,44,255:16,0 chr1 40125053 . G . PASS END=40125053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 40125054 . T . PASS END=40125057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 40125058 . G . PASS END=40125058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 40125059 . T . PASS END=40125059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 40125060 . C . PASS END=40125062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr1 40125063 . C . PASS END=40125082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 40125083 . A . PASS END=40125083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr1 40125084 . C . PASS END=40125096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:15,0 chr1 40125097 . C . PASS END=40125098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 40125099 . T . PASS END=40125120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,491:0,45,255:15,0 chr1 40125121 . A . PASS END=40125122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr1 40125123 . C . PASS END=40125132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 40125133 . G . PASS END=40125133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 40125134 . C . PASS END=40125140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 40125141 . A . PASS END=40125156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 40125157 . C . PASS END=40125158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 40126751 . C . PASS END=40126755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 40126756 . C . PASS END=40126760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 40126761 . G . PASS END=40126761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 40126762 . G . PASS END=40126766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,544:0,48,255:16,0 chr1 40126767 . T . PASS END=40126767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 40126768 . T . PASS END=40126775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr1 40126776 . G . PASS END=40126776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 40126777 . C . PASS END=40126779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 40126780 . T . PASS END=40126780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 40126781 . C . PASS END=40126789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 40126790 . G . PASS END=40126790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 40126791 . A . PASS END=40126810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,652:0,54,255:19,0 chr1 40126811 . G . PASS END=40126814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 40126815 . T . PASS END=40126815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 40126816 . T . PASS END=40126820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 40126821 . A . PASS END=40126821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 40126822 . T . PASS END=40126859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 40126860 . T . PASS END=40126891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,53,255:19,0 chr1 40126892 . A . PASS END=40126905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr1 40126906 . T . PASS END=40126913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:10:0,21,315:0,23,255:9,0 chr1 40126914 . A . PASS END=40126926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,233:0,18,233:6,0 chr1 40126927 . C . PASS END=40126930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 40126931 . G . PASS END=40126935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 40128984 . C . PASS END=40129005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:97:42:0,97,1613:0,97,255:40,2 chr1 40129006 . T . PASS END=40129006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:68:46:0,68,1471:0,68,255:40,2 chr1 40129007 . T . PASS END=40129106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:35:0,89,1249:0,89,255:40,0 chr1 40131193 . C . PASS END=40131193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 40131194 . A . PASS END=40131194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 40131195 . T . PASS END=40131195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr1 40131196 . A . PASS END=40131206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,574:0,40,255:19,0 chr1 40131207 . C . PASS END=40131217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:24,0 chr1 40131218 . G . PASS END=40131218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 40131219 . C . PASS END=40131229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,842:0,62,255:26,0 chr1 40131230 . T . PASS END=40131230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:24,0 chr1 40131231 . T . PASS END=40131278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,895:0,61,255:26,0 chr1 40131279 . T . PASS END=40131280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 40131281 . A . PASS END=40131282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr1 40131283 . G . PASS END=40131283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:18,0 chr1 40131284 . G . PASS END=40131284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 40131285 . T . PASS END=40131300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:18:0,46,706:0,46,255:18,0 chr1 40131301 . G . PASS END=40131301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 40131302 . C . PASS END=40131305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 40131306 . T . PASS END=40131306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:14,0 chr1 40131307 . T . PASS END=40131310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 40131311 . G . PASS END=40131322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,540:0,32,255:13,0 chr1 40131741 . C . PASS END=40131900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:34:0,84,1225:0,86,255:40,1 chr1 40131901 . G . PASS END=40131904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:28,0 chr1 40131905 . T . PASS END=40131906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 40131907 . G . PASS END=40131908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 40137576 . C . PASS END=40137576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 40137577 . G . PASS END=40137578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 40137579 . T . PASS END=40137579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:28,0 chr1 40137580 . T . PASS END=40137580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr1 40137581 . T . PASS END=40137584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,927:0,70,255:29,0 chr1 40137585 . T . PASS END=40137585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 40137586 . T . PASS END=40137586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 40137587 . T . PASS END=40137589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 40137590 . T . PASS END=40137590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 40137591 . C . PASS END=40137659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1141:0,86,255:36,0 chr1 40137660 . T . PASS END=40137663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:61:33:0,61,1170:0,61,255:27,0 chr1 40137664 . C . PASS END=40137664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 40137665 . C . PASS END=40137687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,68,255:26,0 chr1 40137688 . T . PASS END=40137701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,50,255:19,0 chr1 40137702 . A . PASS END=40137710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:16:0,39,585:0,44,255:13,0 chr1 40148208 . C . PASS END=40148375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1243:0,86,255:40,0 chr1 40148376 . G . PASS END=40148405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 40149609 . C . PASS END=40149621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 40149622 . A . PASS END=40149622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 40149623 . G . PASS END=40149624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40149625 . A . PASS END=40149641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:16,0 chr1 40149642 . G T, 94.24 PASS DP=16;MQ=244.04;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,9,0:0,7,0:44:132,47,0,562,47,562:255,48,0:0,0:9.4239e+01,4.4239e+01,1.6360e-04,4.5000e+02,7.9009e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,7:0,0,6,10 chr1 40149643 . C . PASS END=40149667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 40149668 . T . PASS END=40149668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 40149669 . C . PASS END=40149669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 40149670 . T . PASS END=40149679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 40149680 . A . PASS END=40149688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:25,0 chr1 40149689 . T . PASS END=40149689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr1 40149690 . C . PASS END=40149705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,878:0,62,255:25,0 chr1 40149706 . C . PASS END=40149706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 40149707 . G . PASS END=40149759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,864:0,72,255:26,0 chr1 40149760 . C . PASS END=40149763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 40149764 . T . PASS END=40149787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:24:0,63,909:0,67,255:26,0 chr1 40149788 . G . PASS END=40149815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr1 40149816 . G . PASS END=40149818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 40149819 . G . PASS END=40149819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 40149820 . A . PASS END=40149824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 40150114 . C . PASS END=40150119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,610:0,60,255:22,0 chr1 40150120 . G . PASS END=40150120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 40150121 . T . PASS END=40150142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:26,0 chr1 40150143 . G . PASS END=40150148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 40150149 . G . PASS END=40150150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 40150151 . A . PASS END=40150155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 40150156 . G . PASS END=40150159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 40150160 . G . PASS END=40150209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,86,255:32,0 chr1 40150210 . G . PASS END=40150210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 40150211 . A . PASS END=40150213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 40150214 . T . PASS END=40150214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 40150215 . C . PASS END=40150231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:30,0 chr1 40150232 . T . PASS END=40150242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40150243 . C . PASS END=40150252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:28,0 chr1 40150253 . A . PASS END=40150253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:24,0 chr1 40150254 . G . PASS END=40150275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 40204573 . A . PASS END=40204588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 40204589 . G . PASS END=40204591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:26,0 chr1 40204592 . T . PASS END=40204593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 40204594 . T . PASS END=40204602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:70:28:0,70,984:0,70,255:26,0 chr1 40204603 . G . PASS END=40204603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40205837 . G . PASS END=40205935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:38:0,93,1395:0,104,255:40,0 chr1 40207038 . A . PASS END=40207081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:85:0,120,1800:0,241,255:40,0 chr1 40207567 . G . PASS END=40207593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,172,255:40,0 chr1 40208888 . A . PASS END=40208969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:39:0,96,1440:0,100,255:40,0 chr1 40209496 . T . PASS END=40209596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:36:0,90,1350:0,98,255:40,0 chr1 40211047 . G . PASS END=40211154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1158:0,86,255:40,0 chr1 40211155 . G . PASS END=40211165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:25,0 chr1 40211166 . A . PASS END=40211166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 40211167 . G . PASS END=40211170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 40214575 . A . PASS END=40214576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 40214577 . A . PASS END=40214577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,521:0,24,255:15,0 chr1 40214578 . A . PASS END=40214590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,639:0,54,255:19,0 chr1 40214591 . G . PASS END=40214593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 40214594 . C . PASS END=40214595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,668:0,46,255:19,0 chr1 40214596 . C . PASS END=40214596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40214597 . T . PASS END=40214597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,668:0,49,255:19,0 chr1 40214598 . C . PASS END=40214599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40214600 . T . PASS END=40214600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 40214601 . G . PASS END=40214601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40214602 . A . PASS END=40214602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:21,0 chr1 40214603 . A . PASS END=40214603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40214604 . A . PASS END=40214604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:20,0 chr1 40214605 . A . PASS END=40214620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr1 40214621 . G . PASS END=40214623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40214624 . A . PASS END=40214627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 40214628 . A . PASS END=40214632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 40214633 . C . PASS END=40214633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 40214634 . C . PASS END=40214636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 40214637 . C . PASS END=40214637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 40214638 . G . PASS END=40214639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 40214640 . A . PASS END=40214641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 40214642 . C . PASS END=40214643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 40214644 . T . PASS END=40214644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:29,0 chr1 40214645 . C . PASS END=40214651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 40214652 . T . PASS END=40214652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 40214653 . T . PASS END=40214717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:30:0,85,1172:0,85,255:35,0 chr1 40214718 . A . PASS END=40214718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 40214719 . A . PASS END=40214735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1054:0,87,255:30,0 chr1 40214736 . T . PASS END=40214736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 40214737 . T . PASS END=40214738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 40214739 . A . PASS END=40214739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 40214740 . T . PASS END=40214742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40214743 . T . PASS END=40214752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 40214753 . G . PASS END=40214760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:22:0,48,720:0,50,255:19,0 chr1 40218582 . G . PASS END=40218585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1062:0,84,255:30,0 chr1 40218586 . A . PASS END=40218586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 40218587 . C . PASS END=40218724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:30:0,86,1141:0,86,255:40,0 chr1 40218959 . G . PASS END=40219027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:36:0,87,1305:0,108,255:40,0 chr1 40226091 . T . PASS END=40226094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr1 40226095 . T . PASS END=40226095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 40226096 . G . PASS END=40226102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 40226103 . G . PASS END=40226103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 40226104 . C . PASS END=40226109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 40226110 . T . PASS END=40226111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 40226112 . G . PASS END=40226112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 40226113 . A . PASS END=40226113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 40226114 . C . PASS END=40226117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 40226118 . C . PASS END=40226118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 40226119 . A . PASS END=40226205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:33:0,84,1227:0,86,255:40,0 chr1 40226206 . G . PASS END=40226237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,814:0,63,255:26,0 chr1 40226238 . C . PASS END=40226238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 40226239 . A . PASS END=40226240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 40228017 . T . PASS END=40228017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:79:53:0,79,1692:0,79,255:40,0 chr1 40228018 . C . PASS END=40228031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,126,255:40,0 chr1 40228189 . G . PASS END=40228296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:70:0,120,1800:0,177,255:40,1 chr1 40228764 . C . PASS END=40228775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:33:0,96,1249:0,99,255:37,0 chr1 40228776 . G . PASS END=40228776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 40228777 . A . PASS END=40228848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,95,255:39,0 chr1 40228849 . T . PASS END=40228849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:33:0,57,855:0,99,255:19,0 chr1 40228850 . A . PASS END=40228864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:23,0 chr1 40228865 . T . PASS END=40228874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:19,0 chr1 40229361 . A . PASS END=40229365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 40229366 . A . PASS END=40229367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40229368 . A G, 104.95 PASS DP=21;MQ=50.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,10,0:0,11,0:60:143,63,0,790,63,790:255,63,0:0,0:1.0495e+02,6.0195e+01,4.1418e-06,4.5000e+02,9.4965e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,6:0,0,10,11 chr1 40229369 . A . PASS END=40229369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40229370 . G . PASS END=40229373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 40229374 . C . PASS END=40229386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 40229387 . C . PASS END=40229387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 40229388 . C . PASS END=40229392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 40229393 . G A, 13.16 PASS DP=20;MQ=52.73;MQRankSum=-2.126;ReadPosRankSum=0.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,4,0:0.200,0.000:20:10,1,0:6,3,0:13:48,0,45,143,507,650:95,0,255:15,0:1.3158e+01,2.1520e-01,4.7965e+01,1.4331e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,3,1:10,6,2,2 chr1 40229394 . A . PASS END=40229395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 40229396 . G . PASS END=40229396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 40229397 . T . PASS END=40229397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 40229398 . C . PASS END=40229407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 40229408 . G . PASS END=40229421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr1 40229422 . G . PASS END=40229422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 40229423 . C . PASS END=40229430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1033:0,84,255:32,0 chr1 40229431 . A . PASS END=40229446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:32,0 chr1 40229447 . G . PASS END=40229447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:30,0 chr1 40229448 . G . PASS END=40229463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr1 40230295 . C . PASS END=40230425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1095:0,80,255:40,0 chr1 40230426 . G . PASS END=40230426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 40230427 . G . PASS END=40230443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1186:0,83,255:30,0 chr1 40230444 . G . PASS END=40230451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,940:0,70,255:26,0 chr1 40230452 . A . PASS END=40230456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr1 40230457 . G . PASS END=40230489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,925:0,65,255:26,0 chr1 40230521 . G . PASS END=40230529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:28,0 chr1 40230530 . C . PASS END=40230530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 40230531 . C . PASS END=40230539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 40230540 . G . PASS END=40230540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40230541 . A . PASS END=40230541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40230542 . C . PASS END=40230554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,947:0,68,255:26,0 chr1 40230555 . T . PASS END=40230555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,746:0,45,255:24,0 chr1 40230556 . C . PASS END=40230572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 40230573 . C . PASS END=40230595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,582:0,45,255:17,0 chr1 40230596 . A . PASS END=40230606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 40230607 . G . PASS END=40230618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 40230619 . C . PASS END=40230620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 40230621 . T . PASS END=40230625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 40230626 . T . PASS END=40230636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 40230637 . A . LowGQ END=40230637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 40230638 . A . PASS END=40230643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 40230644 . G . PASS END=40230647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 40230648 . C . PASS END=40230648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 40230649 . C . PASS END=40230653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 40230654 . T . PASS END=40230680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,188:0,18,188:6,0 chr1 40235374 . T . PASS END=40235392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:11,0 chr1 40235393 . A . PASS END=40235393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 40235394 . T . PASS END=40235406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,398:0,33,255:13,0 chr1 40235407 . C . PASS END=40235412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 40235413 . C . PASS END=40235414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40235415 . C . PASS END=40235419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 40235420 . A . PASS END=40235421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 40235422 . G . PASS END=40235435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:17,0 chr1 40235436 . T . PASS END=40235436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 40235437 . C . PASS END=40235440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 40235441 . T . PASS END=40235441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 40235442 . T . PASS END=40235454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:19,0 chr1 40235455 . C . PASS END=40235455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 40235456 . G . PASS END=40235465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 40235466 . C . PASS END=40235472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 40235473 . C . PASS END=40235489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 40235490 . C . PASS END=40235501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 40235502 . G . PASS END=40235572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:19,0 chr1 40235573 . T . PASS END=40235581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 40235582 . A . PASS END=40235582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 40235583 . T . PASS END=40235619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:12,0 chr1 40235620 . G . PASS END=40235626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:9,0 chr1 40235627 . A . PASS END=40235637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:5,0 chr1 40235638 . C . PASS END=40235650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 40235651 . A . PASS END=40235669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 40235670 . T . PASS END=40235671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 40235672 . C . PASS END=40235676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 40235677 . C . PASS END=40235678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 40235679 . C . PASS END=40235696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,188:6,0 chr1 40235697 . T . PASS END=40235697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:4,0 chr1 40235698 . C . PASS END=40235699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 40235700 . A . PASS END=40235700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 40235701 . G . PASS END=40235719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 40235720 . T . PASS END=40235725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 40235726 . A . PASS END=40235726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr1 40235727 . C . PASS END=40235735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 40235736 . C . PASS END=40235736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr1 40235737 . T . PASS END=40235745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:7,0 chr1 40235746 . G . LowGQ END=40235746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,178:18,0,196:6,0 chr1 40235747 . G . PASS END=40235747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 40235748 . T . PASS END=40235756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,211:6,0 chr1 40235757 . T . LowGQ END=40235757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,180:10,0,189:5,0 chr1 40235758 . G . PASS END=40235758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 40235759 . T . PASS END=40235759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 40235760 . G . PASS END=40235771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr1 40235772 . T . PASS END=40235772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:5,0 chr1 40235773 . C . PASS END=40235785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 40235786 . T . PASS END=40235786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 40235787 . C . PASS END=40235807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 40235808 . C . PASS END=40235808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 40235809 . C . PASS END=40235822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,219:6,0 chr1 40235823 . T . PASS END=40235823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 40235824 . G . PASS END=40235825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 40235826 . C . PASS END=40235826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,125:0,1,125:4,0 chr1 40235827 . C . PASS END=40235833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:5,0 chr1 40235834 . T . LowGQ END=40235834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 40235835 . T . PASS END=40235836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr1 40235837 . C . LowGQ END=40235839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:4:0,0,92:0,0,96:3,0 chr1 40235840 . G . PASS END=40235841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 40235842 . A . LowGQ END=40235843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,110:3,0 chr1 40235844 . T . PASS END=40235859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 40235860 . C . PASS END=40235864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,103:3,0 chr1 40235865 . C . PASS END=40235866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 40235867 . T . LowGQ END=40235877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,131:0,0,125:3,0 chr1 40235878 . A . PASS END=40235879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 40235880 . A . LowGQ END=40235880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 40235881 . C . PASS END=40235897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 40235898 . T . PASS END=40235899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 40235900 . C . PASS END=40235900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 40235901 . C . PASS END=40235901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 40235902 . G . PASS END=40235902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 40235903 . T . PASS END=40235904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 40235905 . C . PASS END=40235905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 40235906 . T . PASS END=40235960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 40235961 . G . PASS END=40235962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 40235963 . A . PASS END=40235963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 40235964 . T . PASS END=40235965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 40235966 . C . PASS END=40235966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 40235967 . C . PASS END=40235970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 40235971 . G . PASS END=40235996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:19,0 chr1 40235997 . C . PASS END=40236010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,691:0,60,255:23,0 chr1 40236011 . G . PASS END=40236011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 40236012 . C . PASS END=40236017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr1 40236018 . T . PASS END=40236018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 40236019 . G . PASS END=40236036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,984:0,65,255:26,0 chr1 40236037 . G . PASS END=40236053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,930:0,62,255:25,0 chr1 40236054 . C . PASS END=40236054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 40236055 . G . PASS END=40236073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,878:0,61,255:26,0 chr1 40236074 . A C, 33.76 PASS DP=26;MQ=84.31;MQRankSum=-0.462;ReadPosRankSum=1.734;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,7,0:0.269,0.000:26:10,3,0:9,4,0:34:69,0,49,250,672,922:193,0,255:19,0:3.3760e+01,1.8541e-03,5.2102e+01,2.5033e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,5,2:10,9,3,4 chr1 40236075 . G . PASS END=40236079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 40236080 . G . PASS END=40236088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:30,0 chr1 40236089 . T . PASS END=40236089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 40236090 . C . PASS END=40236107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 40236108 . T . PASS END=40236108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 40236109 . C . PASS END=40236111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 40236112 . C . PASS END=40236115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 40236116 . T . PASS END=40236116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 40236117 . T . PASS END=40236117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 40236118 . T . PASS END=40236118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,959:0,54,255:28,0 chr1 40236119 . A . PASS END=40236121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 40236122 . A . PASS END=40236122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 40236123 . C . PASS END=40236140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:30,0 chr1 40236141 . T . PASS END=40236146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40236147 . C . PASS END=40236153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 40236154 . G . PASS END=40236154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 40236155 . T . PASS END=40236159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 40236160 . T . PASS END=40236161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,1 chr1 40236162 . G . PASS END=40236174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:31,0 chr1 40236175 . C . PASS END=40236186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 40236187 . C . PASS END=40236193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40236194 . A . PASS END=40236219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,754:0,63,255:26,0 chr1 40236220 . T . PASS END=40236262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 40236263 . A . PASS END=40236263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 40236264 . C . PASS END=40236280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:14,0 chr1 40236281 . T . PASS END=40236284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40236285 . C . PASS END=40236285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 40236286 . C . PASS END=40236294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 40236295 . T . PASS END=40236295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:8,0 chr1 40236296 . T . PASS END=40236306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:21:10:0,21,315:0,23,255:9,0 chr1 40236307 . G . PASS END=40236312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr1 40236313 . T . PASS END=40236315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 40236316 . C . PASS END=40236326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:5,0 chr1 40236327 . G . PASS END=40236327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:4,0 chr1 40236328 . C . PASS END=40236337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 40236338 . A . PASS END=40236345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 40236346 . G . PASS END=40236377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr1 40236378 . T . LowGQ END=40236378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 40236379 . C . PASS END=40236452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 40236453 . T . PASS END=40236510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 40236511 . G . PASS END=40236543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 40236544 . T . LowGQ END=40236544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 40236545 . G . PASS END=40236566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 40236567 . G . PASS END=40236616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr1 40236617 . G . PASS END=40236617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 40236618 . C . PASS END=40236619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 40236620 . A . PASS END=40236620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 40236621 . G . PASS END=40236627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 40236628 . G . PASS END=40236628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 40236629 . C . PASS END=40236639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,294:0,24,255:8,0 chr1 40236640 . G . PASS END=40236640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 40236641 . T . LowGQ END=40236641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:8,0 chr1 40236642 . C . PASS END=40236643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 40236644 . T . PASS END=40236644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 40236645 . C . PASS END=40236659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 40236660 . T . PASS END=40236660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 40236661 . G . PASS END=40236668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 40236669 . C . PASS END=40236710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr1 40236711 . G . PASS END=40236711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 40236712 . G . PASS END=40236716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40236717 . C . PASS END=40236721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 40236722 . A . PASS END=40236722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 40236723 . T . PASS END=40236752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr1 40236753 . C . PASS END=40236756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 40236757 . C . PASS END=40236761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 40236762 . C . PASS END=40236813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:26,0 chr1 40236814 . G . PASS END=40236818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40236819 . G . PASS END=40236819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 40236820 . G . PASS END=40236822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 40236823 . A . PASS END=40236823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:26,0 chr1 40236824 . C . PASS END=40236832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr1 40236833 . A . PASS END=40236833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:27,0 chr1 40236834 . A . PASS END=40236845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,989:0,87,255:29,0 chr1 40236846 . A . PASS END=40236846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:30:0,54,810:0,90,255:18,0 chr1 40236847 . G . PASS END=40236860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:22:0,63,945:0,66,255:22,0 chr1 40236861 . C . PASS END=40236863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 40236864 . G . PASS END=40236874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 40236875 . C . PASS END=40236875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 40236876 . C . PASS END=40236876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40236877 . G . PASS END=40236879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr1 40236880 . G . PASS END=40236880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 40236881 . G . PASS END=40236881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 40236882 . G . PASS END=40236882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40236883 . G . PASS END=40236884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 40236885 . C . PASS END=40236885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40236886 . C . PASS END=40236887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 40236888 . C . PASS END=40236888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 40236889 . G . PASS END=40236897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,790:0,50,255:19,0 chr1 40236898 . C . PASS END=40236900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40236901 . T . PASS END=40236912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 40236913 . C . PASS END=40236918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 40236919 . C . PASS END=40236927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 40239354 . T . LowDepth;LowGQ END=40239376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 40239538 . C . LowDepth;LowGQ END=40239575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 40239980 . C . LowDepth;LowGQ END=40240128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 40240521 . C . PASS END=40240553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 40240554 . C . LowGQ END=40240583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,61:0,0,69:3,0 chr1 40240584 . A . PASS END=40240647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 40240648 . T . PASS END=40240678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 40240679 . C . PASS END=40240710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,103:0,12,103:5,0 chr1 40245402 . C . PASS END=40245402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 40245403 . T . PASS END=40245403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 40245404 . G . PASS END=40245406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1256:0,105,255:37,0 chr1 40245407 . T . PASS END=40245410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1396:0,111,255:37,0 chr1 40245411 . G . PASS END=40245411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 40245412 . C . PASS END=40245450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1304:0,94,255:36,0 chr1 40253824 . C . PASS END=40253829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 40253830 . T . PASS END=40253830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 40253831 . A . PASS END=40253881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 40253882 . G . PASS END=40253896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 40253897 . G . PASS END=40253907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr1 40253908 . T . PASS END=40253922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 40253923 . C . PASS END=40253952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,70:0,6,70:3,0 chr1 40253953 . G . PASS END=40253958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 40253959 . A . PASS END=40253987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 40253988 . C . PASS END=40254005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 40254006 . A . LowGQ END=40254157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,16:3,0 chr1 40307416 . T . PASS END=40307585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:48:0,118,1800:0,118,255:40,0 chr1 40309773 . C . PASS END=40309890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:33:0,87,1240:0,89,255:40,0 chr1 40310203 . C . PASS END=40310307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:31:0,83,1164:0,83,255:40,0 chr1 40310308 . A . PASS END=40310312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,74,255:24,0 chr1 40312892 . T . PASS END=40312969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:84:0,120,1800:0,231,255:40,0 chr1 40313220 . C . PASS END=40313332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:43:0,108,1604:0,108,255:40,0 chr1 40313658 . C . PASS END=40313769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,105,1575:0,125,255:40,0 chr1 40315791 . C . PASS END=40315850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1135:0,90,255:40,0 chr1 40315851 . G . PASS END=40315887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:37:0,96,1440:0,111,255:40,0 chr1 40315888 . A T, 48.40 PASS DP=37;MQ=250.00;MQRankSum=5.135;ReadPosRankSum=3.480;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,16,0:0.432,0.000:37:10,10,0:11,6,0:47:83,0,50,536,708,1244:255,0,255:19,0:4.8397e+01,8.4648e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,7,9:11,10,5,11 chr1 40315889 . A . PASS END=40315901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1280:0,92,255:32,0 chr1 40315902 . A . PASS END=40315902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:29,0 chr1 40315903 . G . PASS END=40315903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 40315904 . A . PASS END=40315904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 40315905 . T . PASS END=40315908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 40315909 . T . PASS END=40315909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 40315910 . G . PASS END=40315925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1142:0,85,255:33,0 chr1 40315926 . G . PASS END=40315928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 40315929 . A . PASS END=40315933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1066:0,66,255:27,0 chr1 40318403 . C . PASS END=40318526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1197:0,83,255:40,0 chr1 40318527 . T . PASS END=40318527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1250:0,59,255:34,0 chr1 40318528 . C . PASS END=40318544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1194:0,83,255:34,0 chr1 40318545 . G . PASS END=40318545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 40318546 . G . PASS END=40318548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 40319642 . C . PASS END=40319740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:70:0,120,1800:0,210,255:40,0 chr1 40322949 . C . PASS END=40322953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 40322954 . C . PASS END=40323089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1133:0,87,255:40,0 chr1 40341734 . A . PASS END=40341736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 40341737 . C . PASS END=40341741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1202:0,96,255:32,0 chr1 40341742 . C . PASS END=40341742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 40341743 . C . PASS END=40341766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1185:0,86,255:34,0 chr1 40341767 . G . PASS END=40341768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr1 40341769 . G . PASS END=40341773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 40341774 . G C, 49.93 PASS DP=33;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=3.008;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,16,0:0.485,0.000:33:8,8,0:9,8,0:48:85,0,50,570,608,1178:255,0,255:13,0:4.9931e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,5,8,8:3,14,8,8 chr1 40341775 . G . PASS END=40341778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 40341779 . G . PASS END=40341804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 40348990 . C . LowGQ END=40348990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 40348991 . T . PASS END=40348993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 40348994 . A . PASS END=40348994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 40348995 . T . LowGQ END=40348998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:10,0 chr1 40348999 . G . PASS END=40348999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 40349000 . T . LowGQ END=40349001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:10,0 chr1 40349002 . A . PASS END=40349002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 40349003 . G . PASS END=40349003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 40349004 . C . PASS END=40349005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 40349006 . C . LowGQ END=40349008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 40349009 . A . PASS END=40349009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 40349010 . C . LowGQ END=40349013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:13,0 chr1 40349014 . C . PASS END=40349014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40349015 . T . PASS END=40349018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 40349019 . C . PASS END=40349019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 40349020 . G . PASS END=40349025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 40349026 . C . PASS END=40349054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr1 40349055 . A . PASS END=40349055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 40349056 . T . PASS END=40349090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr1 40349091 . G . PASS END=40349091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 40349092 . A . PASS END=40349093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 40349094 . G . PASS END=40349095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 40349096 . A . PASS END=40349097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 40349098 . G . PASS END=40349112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:19,0 chr1 40349113 . C . PASS END=40349122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 40349123 . C . PASS END=40349128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 40349129 . A . PASS END=40349129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:13,0 chr1 40349130 . C . PASS END=40349130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 40349131 . G A, 50.00 PASS DP=20;MQ=247.01;MQRankSum=3.742;ReadPosRankSum=1.550;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:5,5,0:5,5,0:48:85,0,50,357,358,715:255,0,255:7,0:5.0000e+01,6.5233e-05,5.3000e+01,3.5746e+02,3.9240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,6,4:7,3,9,1 chr1 40349132 . G . PASS END=40349136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 40349137 . T . PASS END=40349137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 40349138 . G . PASS END=40349152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 40349153 . A . PASS END=40349156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 40349157 . A . PASS END=40349159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 40349160 . C . PASS END=40349163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 40363044 . T . PASS END=40363044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 40363045 . T . PASS END=40363053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:25,0 chr1 40363054 . G C, 122.24 PASS DP=25;MQ=248.13;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,13,0:0,12,0:72:160,75,0,953,75,953:255,75,0:0,0:1.2224e+02,7.2237e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,6:0,0,15,10 chr1 40363055 . T . PASS END=40363067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,907:0,75,255:26,0 chr1 40363068 . T . PASS END=40363071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40363072 . T . PASS END=40363082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 40363083 . C . PASS END=40363089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:29,0 chr1 40363090 . C . PASS END=40363091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 40363092 . G . PASS END=40363093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 40363094 . A . PASS END=40363094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 40363095 . T . PASS END=40363109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:29,0 chr1 40363110 . C . PASS END=40363141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,824:0,64,255:26,0 chr1 40363142 . G . PASS END=40363243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1072:0,80,255:40,0 chr1 40363244 . A . PASS END=40363244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1465:0,76,255:36,0 chr1 40363245 . A . PASS END=40363269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1249:0,89,255:37,0 chr1 40363270 . T . PASS END=40363270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1136:0,53,255:30,0 chr1 40363271 . C . PASS END=40363283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:33,0 chr1 40363284 . A . PASS END=40363284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:31,0 chr1 40363285 . T . PASS END=40363308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1187:0,88,255:35,0 chr1 40363309 . G . PASS END=40363309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:34,0 chr1 40363310 . T . PASS END=40363370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:35:0,83,1099:0,83,255:39,0 chr1 40363371 . A . PASS END=40363371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1100:0,55,255:28,0 chr1 40363372 . C . PASS END=40363386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:31,0 chr1 40363387 . T . PASS END=40363387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 40363388 . C . PASS END=40363402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:29,0 chr1 40363403 . T . PASS END=40363403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:28,0 chr1 40363404 . T . PASS END=40363407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:30,0 chr1 40363408 . C . PASS END=40363408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 40363409 . C . PASS END=40363416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 40363417 . T . PASS END=40363417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:30:32:0,30,929:0,30,255:23,0 chr1 40363418 . C . PASS END=40363419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 40363420 . C . PASS END=40363445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1211:0,90,255:33,0 chr1 40363446 . C . PASS END=40363448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 40363449 . C . PASS END=40363454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 40363455 . A . PASS END=40363455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 40363456 . G . PASS END=40363464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 40363465 . T . PASS END=40363465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 40363466 . G . PASS END=40363475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:29,0 chr1 40363476 . T . PASS END=40363476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 40363477 . T . PASS END=40363477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 40363478 . C . PASS END=40363481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40363482 . A . PASS END=40363494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 40363495 . G . PASS END=40363631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1047:0,84,255:40,0 chr1 40363632 . T . PASS END=40363632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 40363633 . T . PASS END=40363636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40363637 . C . PASS END=40363637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:26,0 chr1 40363638 . A . PASS END=40363639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40363640 . T . PASS END=40363642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 40366486 . T . PASS END=40366486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 40366487 . C . PASS END=40366501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 40366502 . G . PASS END=40366502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 40366503 . G . PASS END=40366514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 40366515 . G . PASS END=40366515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 40366516 . A . PASS END=40366517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 40366518 . C . PASS END=40366520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 40366521 . G . PASS END=40366538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 40366539 . A . PASS END=40366553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:15,0 chr1 40366554 . A . PASS END=40366554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 40366555 . G . PASS END=40366566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 40366567 . C . PASS END=40366575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,656:0,63,255:24,0 chr1 40366576 . T . PASS END=40366576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 40366577 . G . PASS END=40366578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 40366579 . C . PASS END=40366579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 40366580 . C . PASS END=40366583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,930:0,72,255:25,0 chr1 40366584 . T . PASS END=40366584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,792:0,45,255:23,0 chr1 40366585 . C . PASS END=40366601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,868:0,61,255:26,0 chr1 40366602 . G . PASS END=40366602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,884:0,47,255:22,0 chr1 40366603 . G . PASS END=40366614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,811:0,61,255:24,0 chr1 40366615 . G . PASS END=40366615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 40366616 . T . PASS END=40366619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr1 40366620 . T . PASS END=40366620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,717:0,55,255:22,0 chr1 40366621 . T . PASS END=40366621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 40366622 . G . PASS END=40366622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,686:0,38,255:21,0 chr1 40366623 . G . PASS END=40366625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 40366626 . T . PASS END=40366626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,616:0,38,255:21,0 chr1 40366627 . C . PASS END=40366628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,750:0,58,255:24,0 chr1 40366629 . C . PASS END=40366629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,670:0,38,255:21,0 chr1 40366630 . G . PASS END=40366630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:27:25:0,27,687:0,27,255:22,0 chr1 40366631 . G . PASS END=40366631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 40366632 . A . PASS END=40366632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,656:0,38,255:22,0 chr1 40366633 . C . PASS END=40366634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40366635 . C . PASS END=40366635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40366636 . G . PASS END=40366636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:8:24:0,8,639:0,8,255:19,0 chr1 40366637 . G . PASS END=40366637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 40366638 . A . PASS END=40366638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:9:25:0,9,665:0,9,255:19,0 chr1 40366639 . G . PASS END=40366640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 40366641 . A . PASS END=40366642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:25:0,45,858:0,45,255:25,0 chr1 40366643 . G . PASS END=40366645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1016:0,71,255:26,0 chr1 40366646 . T . PASS END=40366646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:39:29:0,39,856:0,39,255:24,0 chr1 40366647 . G . PASS END=40366653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,851:0,70,255:26,0 chr1 40366654 . G . PASS END=40366654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,798:0,21,255:22,0 chr1 40366655 . G . PASS END=40366656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 40366657 . T . PASS END=40366657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,828:0,48,255:25,0 chr1 40366658 . T . PASS END=40366658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 40366659 . C . PASS END=40366659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,792:0,45,255:24,0 chr1 40366660 . G . PASS END=40366663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 40366664 . A . PASS END=40366664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:23,0 chr1 40366665 . G . PASS END=40366665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,743:0,25,255:21,0 chr1 40366666 . C . PASS END=40366671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,856:0,61,255:25,0 chr1 40366672 . G . PASS END=40366672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,792:0,17,255:21,0 chr1 40366673 . G . PASS END=40366676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 40366677 . C . PASS END=40366677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr1 40366678 . G . PASS END=40366679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 40366680 . C . PASS END=40366680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,872:0,42,255:24,0 chr1 40366681 . G . PASS END=40366683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 40366684 . C . PASS END=40366684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 40366685 . G . PASS END=40366688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,820:0,64,255:26,0 chr1 40366689 . G . PASS END=40366691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 40366692 . T . PASS END=40366692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 40366693 . G . PASS END=40366693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,886:0,37,255:25,0 chr1 40366694 . C . PASS END=40366697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr1 40366698 . C . PASS END=40366698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40366699 . T . PASS END=40366699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr1 40366700 . T . PASS END=40366700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40366701 . C . PASS END=40366701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,909:0,32,255:26,0 chr1 40366702 . G . PASS END=40366709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 40366710 . G . PASS END=40366718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,892:0,61,255:23,0 chr1 40366719 . C . PASS END=40366719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 40366720 . C . PASS END=40366720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 40366721 . G . PASS END=40366721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 40366722 . G . PASS END=40366730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 40366731 . A . PASS END=40366733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 40366734 . C . PASS END=40366736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40366737 . T . PASS END=40366737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:19,0 chr1 40366738 . G . PASS END=40366738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40366739 . G . PASS END=40366746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 40366747 . C . PASS END=40366754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40366755 . G . PASS END=40366771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:20,0 chr1 40366772 . C . PASS END=40366772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 40366773 . G . PASS END=40366791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,627:0,51,255:17,0 chr1 40366792 . C . PASS END=40366792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 40366793 . A . PASS END=40366810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 40366811 . A . PASS END=40366811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 40366812 . A . PASS END=40366825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 40366826 . C . PASS END=40366831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 40366832 . C . PASS END=40366833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 40366834 . G . PASS END=40366836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 40366837 . T . PASS END=40366840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 40366841 . A . PASS END=40366844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 40366845 . A . PASS END=40366845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 40366846 . G . PASS END=40366849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 40366850 . T . PASS END=40366851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 40366852 . G . PASS END=40366867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr1 40366868 . T . PASS END=40366868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 40366869 . T . PASS END=40366881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 40366882 . G . PASS END=40366883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 40366884 . A . PASS END=40366891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40366892 . T . PASS END=40366892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 40366893 . C . PASS END=40366896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40366897 . T . PASS END=40366897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 40366898 . C . PASS END=40366904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 40366905 . A . PASS END=40366905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 40366906 . C . PASS END=40366946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 40366947 . G . PASS END=40366963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr1 40366964 . C . PASS END=40366968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 40366969 . G . PASS END=40366969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 40366970 . C . PASS END=40366982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 40366983 . A . PASS END=40366983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 40366984 . C . PASS END=40367022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,787:0,63,255:23,0 chr1 40367023 . G . PASS END=40367023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 40367024 . T . PASS END=40367030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 40367031 . T . PASS END=40367031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 40367032 . G . PASS END=40367034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 40367035 . C . PASS END=40367035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 40367036 . G . PASS END=40367039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 40367040 . T . PASS END=40367040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 40367041 . G . PASS END=40367047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 40367048 . T . PASS END=40367048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 40367049 . A . PASS END=40367064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr1 40367065 . G . PASS END=40367065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 40367066 . T . PASS END=40367079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 40367080 . A . PASS END=40367084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 40367085 . G . PASS END=40367085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40367086 . C . PASS END=40367102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 40367103 . C . PASS END=40367115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:13:0,30,450:0,39,255:13,0 chr1 40367480 . C . PASS END=40367499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 40367500 . C . PASS END=40367542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 40367543 . G . PASS END=40367554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,233:6,0 chr1 40367555 . G . PASS END=40367560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 40420965 . A . PASS END=40420967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:18,0 chr1 40420968 . G . PASS END=40420968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 40420969 . C . PASS END=40420972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,570:0,54,255:18,0 chr1 40420973 . A . PASS END=40420973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:17,0 chr1 40420974 . G . PASS END=40420975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 40420976 . A . PASS END=40420976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 40420977 . G . PASS END=40420992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,631:0,54,255:18,0 chr1 40420993 . G . PASS END=40420998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 40420999 . C . PASS END=40420999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 40421000 . G . PASS END=40421000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 40421001 . G . PASS END=40421001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 40421002 . C . PASS END=40421008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:23,0 chr1 40421009 . G . PASS END=40421009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 40421010 . C . PASS END=40421013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 40421014 . C . PASS END=40421014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 40421015 . C . PASS END=40421015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:20,0 chr1 40421016 . A . PASS END=40421016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 40421017 . C . PASS END=40421023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 40421024 . C . PASS END=40421026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 40421027 . C . PASS END=40421027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40421028 . C . PASS END=40421032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 40421033 . C . PASS END=40421047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 40421048 . C . PASS END=40421057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,47,255:18,0 chr1 40422759 . A . PASS END=40422759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,621:0,30,255:19,0 chr1 40422760 . A . PASS END=40422760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 40422761 . A . PASS END=40422762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 40422763 . A . PASS END=40422763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,638:0,24,255:20,0 chr1 40422764 . A . PASS END=40422769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 40422770 . A . PASS END=40422775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,707:0,49,255:19,0 chr1 40422776 . G . PASS END=40422776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:19,0 chr1 40422777 . A . PASS END=40422778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 40422779 . A . PASS END=40422779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 40422780 . C . PASS END=40422782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 40422783 . C . PASS END=40422784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,814:0,53,255:21,0 chr1 40422785 . G . PASS END=40422787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 40422788 . G . PASS END=40422788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 40422789 . T . PASS END=40422790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 40422791 . T . PASS END=40422791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:24,0 chr1 40422792 . G . PASS END=40422802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr1 40422803 . G . PASS END=40422823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr1 40422824 . A . PASS END=40422831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 40422832 . A . PASS END=40422833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 40422834 . C . PASS END=40422867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,837:0,63,255:26,0 chr1 40422868 . A . PASS END=40422868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,693:0,35,255:21,0 chr1 40422869 . G . PASS END=40422869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 40422870 . A . PASS END=40422870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 40422871 . T . PASS END=40422883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:23,0 chr1 40422884 . T . PASS END=40422893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:18,0 chr1 40424334 . A . PASS END=40424335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 40424336 . G . PASS END=40424337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 40424338 . A . PASS END=40424351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,568:0,40,255:19,0 chr1 40424352 . T . PASS END=40424352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 40424353 . T . PASS END=40424357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 40424358 . T . PASS END=40424360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 40424361 . T . PASS END=40424361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 40424362 . C . PASS END=40424362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,782:0,63,255:21,0 chr1 40424363 . C . PASS END=40424364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 40424365 . C . PASS END=40424368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 40424369 . C . PASS END=40424369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 40424370 . C . PASS END=40424372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,872:0,72,255:25,0 chr1 40424373 . G . PASS END=40424373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 40424374 . T . PASS END=40424389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,876:0,61,255:26,0 chr1 40424390 . C . PASS END=40424394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40424395 . T . PASS END=40424403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr1 40424404 . T . PASS END=40424404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:25,0 chr1 40424405 . T . PASS END=40424406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 40424407 . T . PASS END=40424408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40424409 . G . PASS END=40424411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 40424412 . C . PASS END=40424414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 40424415 . G . PASS END=40424416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 40424417 . C . PASS END=40424419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 40424420 . G . PASS END=40424442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr1 40424443 . T . PASS END=40424443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:20,0 chr1 40424444 . G . PASS END=40424457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,799:0,66,255:22,0 chr1 40424458 . G . PASS END=40424458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 40424459 . C . PASS END=40424460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40424461 . A . PASS END=40424497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:15:0,45,507:0,45,255:20,0 chr1 40430883 . G . PASS END=40430906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:40:0,95,1302:0,95,255:40,0 chr1 40430907 . C T, 49.42 PASS DP=52;MQ=250.00;MQRankSum=6.158;ReadPosRankSum=2.506;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,24,0:0.462,0.000:52:13,13,0:15,11,0:48:84,0,50,801,957,1757:255,0,255:28,0:4.9421e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,13,13,11:18,10,12,12 chr1 40430908 . G . PASS END=40430944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,142,255:40,0 chr1 40430945 . T . PASS END=40431006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,117,1755:0,121,255:40,0 chr1 40431143 . T . PASS END=40431221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,134,255:40,0 chr1 40431529 . G . PASS END=40431529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:21,0 chr1 40431530 . G . PASS END=40431542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,861:0,69,255:26,0 chr1 40431543 . G . PASS END=40431683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1200:0,83,255:40,0 chr1 40431684 . A . PASS END=40431686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,108,255:26,0 chr1 40432273 . C . PASS END=40432297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:33:0,98,980:0,98,255:39,0 chr1 40432298 . G . PASS END=40432298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:34,0 chr1 40432299 . G . PASS END=40432363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,108,1620:0,120,255:40,0 chr1 40432483 . A . PASS END=40432483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40432484 . A . PASS END=40432508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,978:0,81,255:33,0 chr1 40432509 . C . PASS END=40432510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:31,0 chr1 40432511 . A . PASS END=40432536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1219:0,92,255:34,0 chr1 40432537 . T . PASS END=40432537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 40432538 . G . PASS END=40432604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1158:0,83,255:36,0 chr1 40432758 . C . PASS END=40432841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,105,1498:0,105,255:40,0 chr1 40433300 . C . PASS END=40433383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,111,1665:0,130,255:40,0 chr1 40433476 . T . PASS END=40433553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1260:0,96,255:40,0 chr1 40433554 . G . PASS END=40433554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 40433555 . G . PASS END=40433556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 40433557 . A . PASS END=40433588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,817:0,68,255:26,0 chr1 40434006 . G . PASS END=40434139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1251:0,87,255:40,0 chr1 40434140 . T . PASS END=40434149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,83,255:26,0 chr1 40434241 . C . PASS END=40434242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40434243 . T . PASS END=40434244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 40434245 . G . PASS END=40434247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 40434248 . G . PASS END=40434250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 40434251 . T . PASS END=40434264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,784:0,66,255:22,0 chr1 40434265 . C . PASS END=40434265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,507:0,16,255:18,0 chr1 40434266 . T . PASS END=40434268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,640:0,49,255:20,0 chr1 40434269 . T . PASS END=40434272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 40434273 . A . PASS END=40434274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,655:0,52,255:21,0 chr1 40434275 . C . PASS END=40434276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:23,0 chr1 40434277 . G . LowGQ END=40434277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,507:20,0,255:19,0 chr1 40434278 . G . PASS END=40434281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,765:0,72,255:26,0 chr1 40434282 . G . PASS END=40434283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:31:27:0,31,723:0,31,255:25,0 chr1 40434284 . G . PASS END=40434284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 40434285 . T . PASS END=40434287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 40434288 . A . PASS END=40434288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 40434289 . G . PASS END=40434289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1003:0,66,255:29,0 chr1 40434290 . T . PASS END=40434293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,98,255:33,0 chr1 40434294 . C . PASS END=40434294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1017:0,52,255:30,0 chr1 40434295 . A . PASS END=40434296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 40434297 . T . PASS END=40434297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1037:0,49,255:30,0 chr1 40434298 . G . PASS END=40434300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1313:0,111,255:37,0 chr1 40434301 . C . PASS END=40434301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:35,0 chr1 40434302 . A . PASS END=40434302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1374:0,111,255:37,0 chr1 40434303 . T . PASS END=40434303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1202:0,61,255:34,0 chr1 40434304 . G . PASS END=40434310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1321:0,97,255:39,0 chr1 40434311 . A . PASS END=40434311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1188:0,53,255:33,0 chr1 40434312 . C . PASS END=40434314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1413:0,104,255:38,0 chr1 40434315 . T . PASS END=40434315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1260:0,73,255:35,0 chr1 40434316 . G . PASS END=40434323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1352:0,103,255:38,0 chr1 40434324 . T . PASS END=40434324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1324:0,70,255:35,0 chr1 40434325 . A . PASS END=40434357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:38:0,84,1308:0,84,255:39,0 chr1 40434358 . A . PASS END=40434358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1262:0,78,255:35,0 chr1 40434359 . A . PASS END=40434359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 40434360 . T . PASS END=40434360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:14:39:0,14,1186:0,14,255:32,0 chr1 40434361 . G . PASS END=40434385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1194:0,84,255:37,0 chr1 40434386 . C . PASS END=40434386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:29,0 chr1 40434387 . G . PASS END=40434391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1149:0,82,255:31,0 chr1 40434392 . A . PASS END=40434393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1119:0,63,255:28,0 chr1 40434394 . T . PASS END=40434394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1041:0,49,255:26,0 chr1 40434395 . A . PASS END=40434397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:28,0 chr1 40434398 . A . PASS END=40434399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 40434400 . G . PASS END=40434400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:26,0 chr1 40434401 . G . PASS END=40434401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 40434402 . C . PASS END=40434402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:28,0 chr1 40434403 . C . PASS END=40434407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 40434408 . A . PASS END=40434408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 40434409 . G . PASS END=40434413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 40434414 . T . PASS END=40434417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:24,0 chr1 40435177 . G . PASS END=40435177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 40435178 . G . PASS END=40435179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 40435180 . C . PASS END=40435180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 40435181 . G . PASS END=40435194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr1 40435195 . T . PASS END=40435195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 40435196 . G . PASS END=40435202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 40435203 . C . PASS END=40435203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 40435204 . A . PASS END=40435240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,808:0,66,255:26,0 chr1 40525019 . A . PASS END=40525023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 40525024 . T . PASS END=40525024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 40525025 . G . PASS END=40525039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,802:0,72,255:25,0 chr1 40525040 . G . PASS END=40525040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 40525041 . T . PASS END=40525045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:26,0 chr1 40525046 . A . PASS END=40525049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 40525050 . T . PASS END=40525050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 40525051 . G . PASS END=40525054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 40525055 . A . PASS END=40525055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:30,0 chr1 40525056 . G . PASS END=40525065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:33,0 chr1 40525066 . C . PASS END=40525066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:32,0 chr1 40525067 . C . PASS END=40525130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,86,255:37,0 chr1 40525739 . C . PASS END=40525746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:22,0 chr1 40525747 . G . PASS END=40525747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 40525748 . C . PASS END=40525749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 40525750 . C . PASS END=40525753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 40525754 . A . PASS END=40525754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 40525755 . T . PASS END=40525766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr1 40525767 . T . PASS END=40525767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 40525768 . G . PASS END=40525798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 40525799 . A . PASS END=40525799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40525800 . C . PASS END=40525814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 40525815 . A . PASS END=40525834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,930:0,65,255:24,0 chr1 40525835 . A . PASS END=40525835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 40525836 . G . PASS END=40525837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 40525838 . A . PASS END=40525842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:41:23:0,41,675:0,41,255:16,0 chr1 40527407 . G . PASS END=40527484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:33:0,90,1230:0,99,255:40,0 chr1 40529899 . A . PASS END=40530042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:33:0,86,1191:0,86,255:40,0 chr1 40530146 . G . PASS END=40530231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,124,255:40,0 chr1 40531887 . G . PASS END=40531992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1141:0,80,255:40,0 chr1 40533212 . G . PASS END=40533226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 40533227 . G . PASS END=40533228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 40533229 . A . PASS END=40533265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 40533266 . T G, 89.14 PASS DP=14;MQ=208.34;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,14,0:1.000,0.000:14:0,9,0:0,5,0:39:127,42,0,539,42,539:255,42,0:0,0:8.9136e+01,3.9136e+01,5.3018e-04,4.5000e+02,7.3906e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,9:0,0,6,8:40533266 chr1 40533267 . G . PASS END=40533274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 40533275 . C . PASS END=40533277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:13,0 chr1 40533278 . C . PASS END=40533279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 40533280 . T . LowGQ END=40533280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,341:5,0,255:10,0 chr1 40533281 . C . PASS END=40533281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 40533282 . C . PASS END=40533282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 40533283 . A . LowGQ END=40533283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,325:5,0,255:10,0 chr1 40533284 . C . PASS END=40533284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 40533285 . C . PASS END=40533286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,346:0,25,255:11,0 chr1 40533287 . T G, 88.20 PASS DP=14;MQ=196.09;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,14,0:1.000,0.000:14:0,9,0:0,5,0:38:126,41,0,226,226,226:255,42,0:0,0:8.8201e+01,3.8201e+01,6.5729e-04,2.2297e+02,2.5774e+02,2.2598e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,4,10:0,0,5,9:40533266 chr1 40533288 . G . PASS END=40533294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:9,0 chr1 40533295 . T . LowGQ END=40533295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,5:13:0:13:0,0,139:58,0,197:7,0 chr1 40533296 . C . PASS END=40533297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:7,0 chr1 40533298 . T . LowGQ END=40533299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,249:0,0,255:8,0 chr1 40533300 . C . PASS END=40533303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 40533304 . A . PASS END=40533304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,349:0,6,255:9,0 chr1 40533305 . G . PASS END=40533305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:9,0 chr1 40533306 . T . PASS END=40533306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,280:0,6,255:9,0 chr1 40533307 . C . PASS END=40533308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:9,0 chr1 40533309 . C . PASS END=40533310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 40533311 . A . PASS END=40533311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 40533312 . C . PASS END=40533313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 40533314 . A . PASS END=40533314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:10,0 chr1 40533315 . T G, 73.60 PASS DP=12;MQ=187.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,12,0:1.000,0.000:12:0,9,0:0,3,0:24:111,27,0,211,211,211:255,36,0:0,0:7.3599e+01,2.3599e+01,1.9004e-02,2.0837e+02,2.4314e+02,2.1138e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,12:0,0,3,9:40533315 chr1 40533316 . T . PASS END=40533316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 40533317 . T . PASS END=40533318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 40533319 . A . PASS END=40533319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 40533320 . T G, 69.60 PASS DP=12;MQ=187.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,12,0:1.000,0.000:12:0,9,0:0,3,0:24:107,27,0,207,207,207:255,36,0:0,0:6.9599e+01,2.3598e+01,1.9007e-02,2.0437e+02,2.3914e+02,2.0738e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,12:0,0,3,9:40533315 chr1 40533321 . G . PASS END=40533325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 40533326 . T G, 70.81 PASS DP=11;MQ=191.77;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,11,0:1.000,0.000:11:0,8,0:0,3,0:23:109,26,0,209,209,209:255,33,0:0,0:7.0805e+01,2.3044e+01,2.1600e-02,2.0558e+02,2.4035e+02,2.0859e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,11:0,0,3,8:40533315 chr1 40533327 . A . PASS END=40533346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 40533347 . T G, 74.10 PASS DP=10;MQ=172.65;FractionInformativeReads=0.900 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,9,0:1.000,0.000:9:0,6,0:0,3,0:24:112,27,0,349,27,349:255,27,0:0,0:7.4104e+01,2.4104e+01,1.6918e-02,3.4599e+02,5.8874e+01,3.4899e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,7:0,0,5,4:40533315 chr1 40533348 . C . PASS END=40533366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,250:8,0 chr1 40533367 . T . PASS END=40533375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 40533376 . G . PASS END=40533384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:6:7:0,6,90:0,21,247:2,0 chr1 40533385 . A . PASS END=40533389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 40535362 . C . PASS END=40535395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:19,0 chr1 40535396 . C . PASS END=40535409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,610:0,60,255:22,0 chr1 40535410 . T . PASS END=40535410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 40535411 . G . PASS END=40535422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:22,0 chr1 40535423 . T . PASS END=40535428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:22:0,51,765:0,53,255:19,0 chr1 40535429 . A . PASS END=40535446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 40535447 . A . PASS END=40535447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,660:0,49,255:21,0 chr1 40535448 . C . PASS END=40535459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:23,0 chr1 40535460 . C . PASS END=40535460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 40535461 . C . PASS END=40535464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 40535465 . A . PASS END=40535465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,752:0,55,255:20,0 chr1 40535466 . C . PASS END=40535467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 40535468 . C . PASS END=40535468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 40535469 . C . PASS END=40535471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40535472 . A . PASS END=40535472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,637:0,52,255:21,0 chr1 40535473 . C . PASS END=40535483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 40535484 . C . PASS END=40535485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 40535486 . C . PASS END=40535498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,65,255:21,0 chr1 40535499 . A . PASS END=40535500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:19,0 chr1 40535501 . G . PASS END=40535511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 40535512 . C . PASS END=40535521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:18,0 chr1 40535522 . A . PASS END=40535522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,607:0,29,255:17,0 chr1 40535523 . C . PASS END=40535523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 40535524 . T . PASS END=40535524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 40535525 . G . PASS END=40535528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 40535529 . G . PASS END=40535529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:16,0 chr1 40535530 . G . PASS END=40535537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:18,0 chr1 40535538 . T . PASS END=40535538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,526:0,7,255:14,0 chr1 40535539 . G . PASS END=40535546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 40535831 . G . PASS END=40535954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,120,1800:0,134,255:40,0 chr1 40536102 . A . PASS END=40536117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:86:0,120,1800:0,238,255:40,0 chr1 40536118 . T . PASS END=40536184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:59:0,120,1800:0,177,255:40,0 chr1 40536508 . G . PASS END=40536651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:32:0,87,1304:0,89,255:40,0 chr1 40537122 . A . PASS END=40537129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:26,0 chr1 40537130 . C . PASS END=40537182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1002:0,81,255:33,0 chr1 40537183 . C . PASS END=40537205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 40538432 . T . PASS END=40538432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,141,255:40,1 chr1 40538438 . C . PASS END=40538438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 40538441 . A . PASS END=40538441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 40538645 . C . PASS END=40538645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 40538671 . C . PASS END=40538671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr1 40538714 . G . PASS END=40538714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 40538735 . C . PASS END=40538735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 40538742 . A . PASS END=40538742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 40538764 . T . PASS END=40538764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 40538819 . T . PASS END=40538819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:27,0 chr1 40538823 . G . PASS END=40538823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 40538921 . G . PASS END=40538922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1299:0,97,255:36,0 chr1 40538931 . G . PASS END=40538931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 40538952 . T . PASS END=40538952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 40539006 . T . PASS END=40539006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 40539024 . A . PASS END=40539025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 40539032 . C . PASS END=40539032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 40539054 . G . PASS END=40539054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr1 40539150 . C . PASS END=40539150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40539165 . T . PASS END=40539165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 40539200 . A . PASS END=40539200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 40539203 . A ATGAT, 36.37 PASS DP=24;MQ=250.00;MQRankSum=3.567;ReadPosRankSum=0.167;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,6,0:0.250,0.000:24:7,1,0:11,5,0:36:65,0,50,244,637,881:138,0,255:17,7:3.6371e+01,1.0234e-03,5.3001e+01,2.5001e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:6,12,3,3:9,9,2,4 chr1 40539249 . G . PASS END=40539249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 40539259 . A . PASS END=40539259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 40539263 . A . PASS END=40539263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40539345 . C G, 49.47 PASS DP=37;MQ=250.00;MQRankSum=5.166;ReadPosRankSum=2.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,17,0:0.459,0.000:37:12,8,0:8,9,0:48:84,0,50,600,707,1307:255,0,255:20,0:4.9473e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,7,12,5:9,11,9,8 chr1 40539380 . G . PASS END=40539380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 40539393 . A . PASS END=40539393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 40539481 . G . PASS END=40539481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40539606 . T . PASS END=40539606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 40539643 . G . PASS END=40539643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 40539727 . C . PASS END=40539727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 40539733 . T . PASS END=40539811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1227:0,89,255:34,0 chr1 40539812 . A . PASS END=40539812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:28,0 chr1 40539813 . C . PASS END=40539816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 40539817 . C . PASS END=40539840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:24,0 chr1 40539841 . T . PASS END=40539853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:18,0 chr1 40539854 . T . PASS END=40539855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 40539857 . T . PASS END=40539857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 40542402 . C . PASS END=40542587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1364:0,81,255:40,1 chr1 40544232 . C . PASS END=40544331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,135,255:40,0 chr1 40546068 . C . PASS END=40546102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,110,1430:0,110,255:40,0 chr1 40546103 . T . PASS END=40546159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,102,1530:0,114,255:40,0 chr1 40546171 . A . PASS END=40546171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 40555077 . C . PASS END=40555077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 40555080 . A . PASS END=40555184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,116,1800:0,116,255:40,0 chr1 40555241 . C . PASS END=40555254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,199,255:40,0 chr1 40556996 . G . PASS END=40556996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 40557000 . C . PASS END=40557071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,102,1654:0,102,255:40,0 chr1 40557073 . T . PASS END=40557074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr1 40557712 . C . PASS END=40557712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40557713 . G . PASS END=40557713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40557716 . C . PASS END=40557718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40557719 . A . PASS END=40557728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 40557729 . C . PASS END=40557844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:34:0,91,1205:0,91,255:40,0 chr1 40557847 . A . PASS END=40557847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 40557946 . C . PASS END=40557946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr1 40558062 . C . PASS END=40558064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:71:0,120,1800:0,187,255:40,0 chr1 40558069 . C . PASS END=40558179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:63:0,120,1800:0,138,255:40,1 chr1 40558181 . T . PASS END=40558181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,159,255:40,0 chr1 40558194 . A . PASS END=40558194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 40559605 . C . PASS END=40559605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1364:0,44,255:40,0 chr1 40559606 . T . PASS END=40559606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:45:0,85,1429:0,85,255:40,0 chr1 40559607 . A . PASS END=40559609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:44:0,98,1387:0,98,255:40,0 chr1 40559610 . A . PASS END=40559611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:44:0,75,1506:0,75,255:40,0 chr1 40559612 . C . PASS END=40559631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,106,1616:0,106,255:40,0 chr1 40559632 . A . PASS END=40559632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:76:53:0,76,1740:0,76,255:40,0 chr1 40559633 . G . PASS END=40559635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 40559636 . A . PASS END=40559636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,5:55:60:55:0,60,1607:0,60,255:40,0 chr1 40559637 . G . PASS END=40559691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:82:54:0,82,1773:0,82,255:40,0 chr1 40562779 . T . PASS END=40562789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,623:0,44,255:19,0 chr1 40562790 . T . PASS END=40562796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 40562797 . C . PASS END=40562797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 40562798 . C . PASS END=40562803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 40562804 . A . PASS END=40562804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 40562805 . C . PASS END=40562810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,847:0,69,255:23,0 chr1 40562811 . G . PASS END=40562811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 40562812 . C . PASS END=40562814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40562815 . C . PASS END=40562815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr1 40562816 . G . PASS END=40562817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40562818 . C . PASS END=40562818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 40562819 . G . PASS END=40562825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:23,0 chr1 40562826 . G . PASS END=40562837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 40562838 . G . PASS END=40562838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 40562839 . C . PASS END=40562841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 40562842 . C . PASS END=40562846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr1 40562847 . G . PASS END=40562847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 40562848 . A . PASS END=40562848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 40562849 . G . PASS END=40562855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1039:0,81,255:27,0 chr1 40562856 . A . PASS END=40562866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:24,0 chr1 40562867 . A . PASS END=40562867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 40562868 . G . PASS END=40562886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,793:0,69,255:24,0 chr1 40562887 . C . PASS END=40562887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 40562888 . C . PASS END=40562910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,823:0,62,255:25,0 chr1 40562920 . G . PASS END=40562920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 40562983 . C . PASS END=40562983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 40563068 . G . PASS END=40563068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 40627072 . A . PASS END=40627075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 40627076 . C . LowGQ END=40627076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 40627077 . G . PASS END=40627098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:12,0 chr1 40627099 . G . PASS END=40627099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 40627100 . C . PASS END=40627113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 40627114 . G . PASS END=40627115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 40627116 . G . PASS END=40627160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,612:0,48,255:18,0 chr1 40627161 . T . PASS END=40627161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 40627162 . G . PASS END=40627170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 40627171 . G . PASS END=40627171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40627172 . T . PASS END=40627172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr1 40627173 . T . PASS END=40627180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 40627181 . A . PASS END=40627181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 40627182 . T . PASS END=40627183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 40627184 . G . PASS END=40627186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 40627187 . C . PASS END=40627196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 40627197 . A . PASS END=40627198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 40627199 . C . PASS END=40627199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 40627200 . G . PASS END=40627200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 40627201 . C . PASS END=40627212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:26,0 chr1 40627213 . G . PASS END=40627223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 40627224 . G . PASS END=40627225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 40627226 . G . PASS END=40627227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40627228 . C . PASS END=40627228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 40627229 . T . PASS END=40627232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40627233 . G . PASS END=40627235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,909:0,64,255:26,0 chr1 40627236 . G . PASS END=40627238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40627239 . G . PASS END=40627240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 40627241 . A . PASS END=40627244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40627245 . A . PASS END=40627245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40627246 . G . PASS END=40627249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40627250 . T . PASS END=40627268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 40627269 . G . PASS END=40627269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:21,0 chr1 40627270 . G . PASS END=40627279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr1 40627280 . C . PASS END=40627280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 40627281 . T . PASS END=40627287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 40627288 . T . PASS END=40627288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 40627289 . A . PASS END=40627301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 40627302 . C . PASS END=40627308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,696:0,44,255:19,0 chr1 40654727 . A . PASS END=40654881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:36:0,81,1389:0,81,255:40,0 chr1 40656444 . G . PASS END=40656525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,150,255:40,0 chr1 40661304 . G . PASS END=40661436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:41:0,116,1590:0,116,255:40,0 chr1 40668084 . T . PASS END=40668088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1210:0,96,255:32,0 chr1 40668089 . A . PASS END=40668089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:28,0 chr1 40668090 . A . PASS END=40668273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:83:29:0,83,1156:0,83,255:40,0 chr1 40668274 . T . PASS END=40668286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:23,0 chr1 40688246 . A . PASS END=40688382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:43:0,120,1800:0,123,255:40,0 chr1 40689006 . A . PASS END=40689007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:103:0,120,1800:0,255,255:40,0 chr1 40697189 . G . PASS END=40697330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,132,255:40,2 chr1 40701464 . G . PASS END=40701464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 40701465 . C . PASS END=40701468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 40701469 . A . PASS END=40701472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:30,0 chr1 40701473 . G . PASS END=40701473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 40701474 . C . PASS END=40701789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1094:0,81,255:40,0 chr1 40701790 . G . PASS END=40701790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:54:46:0,54,1185:0,54,255:36,0 chr1 40701791 . A . PASS END=40701952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:39:0,96,1327:0,96,255:40,0 chr1 40701953 . G . PASS END=40701953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1325:0,51,255:35,0 chr1 40701954 . A . PASS END=40701967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1348:0,81,255:39,0 chr1 40701968 . C . PASS END=40701968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1444:0,55,255:36,0 chr1 40701969 . A . PASS END=40701976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:41:0,80,1429:0,80,255:40,0 chr1 40701977 . A . PASS END=40701977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1358:0,68,255:38,0 chr1 40701978 . A . PASS END=40703752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:35:0,80,1259:0,80,255:40,1 chr1 40703753 . T . PASS END=40703753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:34,0 chr1 40703754 . T . PASS END=40703777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:35:0,80,1302:0,80,255:36,0 chr1 40703778 . A . PASS END=40703778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:29,0 chr1 40703779 . A . PASS END=40703817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1180:0,83,255:33,0 chr1 40703818 . T . PASS END=40703818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1127:0,64,255:29,0 chr1 40703819 . C . PASS END=40703873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:32:0,85,1059:0,85,255:35,0 chr1 40703874 . A . PASS END=40703874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1250:0,67,255:34,0 chr1 40703875 . T . PASS END=40703898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,99,1352:0,100,255:39,0 chr1 40703899 . T . PASS END=40703899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1267:0,65,255:37,0 chr1 40703900 . A . PASS END=40703954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1258:0,84,255:39,0 chr1 40703955 . A . PASS END=40703955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:32,0 chr1 40703956 . A . PASS END=40703964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1221:0,89,255:34,0 chr1 40703965 . T . PASS END=40703965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:29,0 chr1 40703966 . G . PASS END=40704002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1243:0,84,255:37,0 chr1 40704003 . A . PASS END=40704003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:33,0 chr1 40704004 . A . PASS END=40704011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1272:0,94,255:35,0 chr1 40704012 . A . PASS END=40704012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:32,0 chr1 40704013 . T . PASS END=40704013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 40704014 . C . PASS END=40704015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:33,0 chr1 40704016 . T . PASS END=40704017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1327:0,95,255:35,0 chr1 40704018 . A . PASS END=40704018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:33,0 chr1 40704019 . A . PASS END=40704230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:36:0,91,1151:0,91,255:40,1 chr1 40704231 . A . PASS END=40704231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:48:56:0,48,1610:0,48,255:40,0 chr1 40704232 . G . PASS END=40704232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:78:61:0,78,1877:0,78,255:40,0 chr1 40704233 . G . PASS END=40704233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:99:61:0,119,1975:0,119,255:40,0 chr1 40704234 . G . PASS END=40704234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:69:61:0,69,1823:0,69,255:40,0 chr1 40704235 . C . PASS END=40705389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:94:36:0,94,1296:0,94,255:40,2 chr1 40705390 . G . PASS END=40705426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,137,255:40,0 chr1 40705427 . C G, 49.62 PASS DP=60;MQ=250.00;MQRankSum=6.631;ReadPosRankSum=1.267;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,28,0:0.467,0.000:60:21,15,0:11,13,0:48:84,0,50,995,1124,2119:255,0,255:22,0:4.9621e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,18,8,20:13,19,15,13 chr1 40705428 . A . PASS END=40705464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,120,1800:0,125,255:40,0 chr1 40705465 . A . PASS END=40706119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:92:43:0,92,1475:0,92,255:40,0 chr1 40713666 . A . PASS END=40713667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 40713668 . G . PASS END=40713673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 40713674 . A . PASS END=40713676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40713677 . T . PASS END=40713677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr1 40713678 . T . PASS END=40713679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 40713680 . A . PASS END=40713680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40713681 . T . PASS END=40713681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 40713682 . C . PASS END=40713689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 40713690 . T . PASS END=40713691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 40713692 . G . PASS END=40713695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 40713696 . A . PASS END=40713696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 40713697 . A . PASS END=40713709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1111:0,82,255:32,0 chr1 40713710 . T . PASS END=40713710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1099:0,66,255:31,0 chr1 40713711 . C . PASS END=40713713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1178:0,86,255:33,0 chr1 40713714 . T . PASS END=40713714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1110:0,63,255:33,0 chr1 40713715 . C . PASS END=40713902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:94:38:0,94,1485:0,94,255:40,0 chr1 40716955 . A . PASS END=40717239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:34:0,84,1181:0,84,255:40,0 chr1 40717240 . A . PASS END=40717240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:29,0 chr1 40717241 . C . PASS END=40717244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:30,0 chr1 40717245 . A . PASS END=40717245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1045:0,63,255:25,0 chr1 40717246 . G . PASS END=40717250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 40717251 . T . PASS END=40717266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,750:0,61,255:26,0 chr1 40723759 . C . PASS END=40723759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 40723763 . A . PASS END=40723763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 40723772 . A . PASS END=40723772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:8,0 chr1 40723889 . C . PASS END=40723889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 40723898 . G . PASS END=40723898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 40723931 . G . PASS END=40723931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 40723944 . A . PASS END=40724028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1260:0,84,255:40,0 chr1 40724029 . C . PASS END=40724046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr1 40724047 . C . PASS END=40724066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,660:0,54,255:18,0 chr1 40726511 . A . PASS END=40726527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:33:0,86,1227:0,86,255:38,0 chr1 40726528 . A . PASS END=40726528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 40726529 . A . PASS END=40726655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:35:0,81,1215:0,89,255:40,0 chr1 40726656 . C . PASS END=40726657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:25,0 chr1 40728506 . T . PASS END=40728544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,110,1519:0,110,255:40,0 chr1 40733063 . G . PASS END=40733167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr1 40733458 . C . PASS END=40733544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,141,255:40,0 chr1 40734091 . A . PASS END=40734207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:96:41:0,96,1440:0,123,255:40,0 chr1 40735647 . A . PASS END=40735796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:90:30:0,90,1096:0,90,255:40,0 chr1 40735797 . C . PASS END=40735797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:33,0 chr1 40735798 . T . PASS END=40735799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:33,0 chr1 40737566 . G . PASS END=40737707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,107,1459:0,107,255:40,0 chr1 40745792 . T . PASS END=40745798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,479:0,48,255:16,0 chr1 40745799 . C . PASS END=40745799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 40745800 . A . PASS END=40745811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,627:0,48,255:17,0 chr1 40745812 . A . PASS END=40745818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 40745819 . A . PASS END=40745819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 40745820 . A . PASS END=40745825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 40745826 . G . PASS END=40745826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 40745827 . A . PASS END=40745832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 40745833 . A . PASS END=40745833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 40745834 . G . PASS END=40745843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,961:0,75,255:26,0 chr1 40745844 . A . PASS END=40745844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:22,0 chr1 40745845 . A . PASS END=40745856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:25,0 chr1 40745857 . G . PASS END=40745871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1202:0,96,255:35,0 chr1 40745872 . G . PASS END=40745872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 40745873 . C . PASS END=40745970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1194:0,83,255:40,0 chr1 40747001 . T . PASS END=40747001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 40747015 . G . PASS END=40747177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1116:0,85,255:40,0 chr1 40747178 . A . PASS END=40747178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 40747179 . G . PASS END=40747188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 40747189 . C . PASS END=40747189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 40747190 . T . PASS END=40747191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 40747192 . A . PASS END=40747194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 40747195 . T . PASS END=40747197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 40747198 . A . PASS END=40747199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:25,0 chr1 40751596 . G . PASS END=40751701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:34:0,92,1235:0,92,255:40,0 chr1 40756518 . C . PASS END=40756518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,163,255:40,0 chr1 40756526 . A . PASS END=40756669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:55:0,114,1710:0,118,255:40,0 chr1 40758116 . G . PASS END=40758118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 40758119 . T . PASS END=40758119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:30,0 chr1 40758120 . C . PASS END=40758341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:82:32:0,82,1149:0,82,255:40,0 chr1 40758379 . T . PASS END=40758379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr1 40758520 . C . PASS END=40758520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr1 40758553 . G . PASS END=40758553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,219,255:40,0 chr1 40758589 . G . PASS END=40758589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 40758637 . T . PASS END=40758637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr1 40758877 . C . PASS END=40758877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 40759004 . T . PASS END=40759004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:90:0,120,1800:0,255,255:40,0 chr1 40759037 . A . PASS END=40759037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr1 40759043 . C . PASS END=40759043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 40759051 . T . PASS END=40759051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 40759141 . T . PASS END=40759141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 40759250 . G . PASS END=40759250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 40759383 . G . PASS END=40759383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 40759481 . T . PASS END=40759481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1264:0,94,255:35,0 chr1 40759654 . T . PASS END=40759654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 40759803 . A . PASS END=40759803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 40759833 . A . PASS END=40759833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 40759844 . G . PASS END=40759844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 40766171 . C . PASS END=40766171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 40766411 . G . PASS END=40766411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 40766449 . C . PASS END=40766449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 40766468 . G . PASS END=40766468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 40766484 . C . PASS END=40766484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40766485 . G . PASS END=40766485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 40766532 . C . PASS END=40766532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 40766624 . G . PASS END=40766624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 40766787 . T . PASS END=40766787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 40766816 . C . PASS END=40766816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 40766854 . T . PASS END=40766862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 40766863 . C . PASS END=40766863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 40766864 . T . PASS END=40766877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1073:0,80,255:31,0 chr1 40766878 . C . PASS END=40766878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:29,0 chr1 40766879 . T . PASS END=40766883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 40766884 . A . PASS END=40766888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 40766889 . G . PASS END=40766893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40766894 . G . PASS END=40766944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 40766945 . A . PASS END=40766945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 40766946 . G . PASS END=40766984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 40766985 . C . PASS END=40766985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 40766986 . T . PASS END=40766989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 40766990 . G . PASS END=40766990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 40766991 . C . PASS END=40766991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40766992 . C . PASS END=40766992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 40766993 . C . PASS END=40767017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 40767018 . T . PASS END=40767018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 40767019 . G . PASS END=40767036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 40767037 . A . PASS END=40767037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,673:0,46,255:19,0 chr1 40767038 . G . PASS END=40767050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 40767051 . G . PASS END=40767053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 40767479 . C . PASS END=40767479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 40767484 . C . PASS END=40767484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 40767485 . T . PASS END=40767485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,657:0,8,255:19,0 chr1 40767486 . G . PASS END=40767486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 40767487 . G . PASS END=40767487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 40767488 . G . PASS END=40767489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 40767490 . T . PASS END=40767490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 40767491 . C . PASS END=40767493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 40767494 . T . PASS END=40767494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 40767495 . G . PASS END=40767495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:21,0 chr1 40767496 . G . PASS END=40767499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 40767500 . C . PASS END=40767501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 40767502 . C . PASS END=40767502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 40767503 . A . PASS END=40767503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 40767504 . G . PASS END=40767504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 40767505 . G . PASS END=40767508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,775:0,50,255:21,0 chr1 40767509 . C . PASS END=40767512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40767513 . G . PASS END=40767516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 40767517 . G . PASS END=40767527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:23,0 chr1 40767528 . A . PASS END=40767528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 40767529 . C . PASS END=40767529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 40767530 . T . PASS END=40767531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 40767532 . C . PASS END=40767536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40767537 . G . PASS END=40767537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 40767538 . G . PASS END=40767538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40767539 . A . PASS END=40767539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:18,0 chr1 40767540 . T . PASS END=40767541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:43:20:0,43,668:0,43,255:19,0 chr1 40767542 . A . PASS END=40767542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 40767543 . C . PASS END=40767543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,627:0,27,255:18,0 chr1 40767544 . C . PASS END=40767545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 40767546 . T . PASS END=40767561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,646:0,43,255:19,0 chr1 40768293 . C . PASS END=40768298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 40768299 . G . PASS END=40768300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40768301 . C . PASS END=40768324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr1 40768325 . G . PASS END=40768326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 40768327 . T . PASS END=40768328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40768329 . C . PASS END=40768334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 40768335 . T . PASS END=40768336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1108:0,74,255:26,0 chr1 40768337 . C . PASS END=40768401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1094:0,90,255:30,0 chr1 40768402 . A . PASS END=40768415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,77,255:26,0 chr1 40768416 . G . PASS END=40768416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 40768417 . A . PASS END=40768449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,872:0,75,255:26,0 chr1 40768450 . C . PASS END=40768450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 40768451 . T . PASS END=40768454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 40768455 . C . PASS END=40768455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 40768456 . A . PASS END=40768458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 40768459 . C . PASS END=40768474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,653:0,43,255:19,0 chr1 40768475 . A . LowGQ END=40768475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,512:4,0,255:14,0 chr1 40768476 . G . PASS END=40768479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,623:0,43,255:17,0 chr1 40768480 . C . PASS END=40768480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,509:0,37,255:13,0 chr1 40768481 . T . PASS END=40768481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 40768803 . C . PASS END=40768809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 40768810 . C . PASS END=40768810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 40768811 . A . PASS END=40768821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,919:0,81,255:29,0 chr1 40768822 . C . PASS END=40768833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1008:0,68,255:26,0 chr1 40768834 . G . PASS END=40768850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:30,0 chr1 40768851 . C . PASS END=40768852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1054:0,74,255:29,0 chr1 40768853 . C . PASS END=40768853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 40768854 . G . PASS END=40768854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 40768855 . G . PASS END=40768857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40769202 . C . PASS END=40769209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:25,0 chr1 40769210 . C . PASS END=40769210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 40769211 . C . PASS END=40769214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 40769215 . C . PASS END=40769219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40769220 . G . PASS END=40769220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 40769221 . G . PASS END=40769228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,992:0,81,255:31,0 chr1 40769229 . T . PASS END=40769229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:28,0 chr1 40769230 . G . PASS END=40769254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:31,0 chr1 40769255 . C . PASS END=40769256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:33,0 chr1 40769257 . C . PASS END=40769263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:32,0 chr1 40769264 . C . PASS END=40769264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:31,1 chr1 40769265 . G . PASS END=40769266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:32,1 chr1 40769267 . G . PASS END=40769267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 40769268 . G . PASS END=40769268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:32,0 chr1 40769269 . G . PASS END=40769280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1186:0,86,255:34,0 chr1 40769281 . C . PASS END=40769281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:30,0 chr1 40769282 . C . PASS END=40769282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1333:0,95,255:31,0 chr1 40769283 . C . PASS END=40769283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:30,0 chr1 40769284 . T . PASS END=40769287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,91,255:32,0 chr1 40769288 . C . PASS END=40769289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:34:0,69,1163:0,69,255:27,0 chr1 40769290 . C . PASS END=40769290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:27,0 chr1 40769291 . C . PASS END=40769291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1072:0,44,255:27,0 chr1 40769292 . T . PASS END=40769294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1041:0,63,255:27,0 chr1 40769295 . G . PASS END=40769295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,1014:0,24,255:27,0 chr1 40769296 . G . PASS END=40769296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 40769297 . C . PASS END=40769297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr1 40769298 . G . PASS END=40769298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 40769299 . C . PASS END=40769299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr1 40769300 . C . PASS END=40769304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:26,0 chr1 40769305 . T . PASS END=40769305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:25,0 chr1 40769306 . C . PASS END=40769307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 40769308 . C . PASS END=40769308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:26,0 chr1 40769309 . C . PASS END=40769310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40769311 . C . PASS END=40769311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 40769312 . T . PASS END=40769312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 40769313 . G . PASS END=40769316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:24,0 chr1 40769317 . C . PASS END=40769317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,864:0,50,255:23,0 chr1 40769318 . C . PASS END=40769322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:24,0 chr1 40769323 . T . PASS END=40769324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:42:25:0,42,806:0,42,255:21,0 chr1 40769325 . G . PASS END=40769325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,820:0,20,255:21,0 chr1 40769326 . C . PASS END=40769327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 40769328 . G . PASS END=40769328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:18,0 chr1 40769329 . G . PASS END=40769329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:18,0 chr1 40769330 . G . PASS END=40769330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:19,0 chr1 40769331 . T . PASS END=40769331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:18,0 chr1 40769332 . T . PASS END=40769332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,709:0,19,255:17,0 chr1 40769333 . C . PASS END=40769335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,825:0,42,255:19,0 chr1 40769336 . C . PASS END=40769336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 40769337 . A . LowGQ END=40769337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,714:3,0,255:17,0 chr1 40769338 . C . PASS END=40769338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:18,0 chr1 40769339 . G . PASS END=40769339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,721:0,27,255:18,0 chr1 40769340 . T . PASS END=40769340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:19,0 chr1 40769341 . A . PASS END=40769341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,709:0,35,255:18,0 chr1 40769342 . C . PASS END=40769342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,657:0,16,255:16,0 chr1 40769343 . T . PASS END=40769343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:17,0 chr1 40769344 . C . PASS END=40769344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40769345 . C . PASS END=40769346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:19,0 chr1 40769347 . T . LowGQ END=40769347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,657:6,0,255:17,0 chr1 40769348 . G . PASS END=40769348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 40769479 . C . PASS END=40769503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:25,0 chr1 40769504 . G . PASS END=40769504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 40769505 . A . PASS END=40769507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 40769508 . C . PASS END=40769508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr1 40769509 . G . PASS END=40769511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 40769600 . C . PASS END=40769610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 40769611 . T . PASS END=40769611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:17,0 chr1 40769612 . C . PASS END=40769644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 40769736 . C . PASS END=40769765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 40769766 . G . PASS END=40769766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 40769767 . G . PASS END=40769769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 40769770 . C . PASS END=40769770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 40769771 . C . PASS END=40769771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 40769992 . C . PASS END=40770015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,562:0,48,255:19,0 chr1 40770016 . G . PASS END=40770032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 40770033 . T . PASS END=40770033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 40770034 . T . PASS END=40770036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40770037 . G . PASS END=40770037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 40770038 . G . PASS END=40770060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr1 40770061 . G . PASS END=40770063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 40770148 . C . PASS END=40770201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1241:0,96,255:38,0 chr1 40770204 . G . PASS END=40770204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 40770466 . C . PASS END=40770469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 40770470 . T . PASS END=40770470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 40770471 . G . PASS END=40770471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 40770472 . T . PASS END=40770483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 40770484 . C . PASS END=40770496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 40770497 . T . PASS END=40770497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 40770498 . C . PASS END=40770502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 40770503 . C . PASS END=40770516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 40770517 . T . PASS END=40770517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 40770518 . C . PASS END=40770519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 40771387 . C . PASS END=40771417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,939:0,72,255:26,0 chr1 40771418 . A . PASS END=40771419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 40771420 . G . PASS END=40771425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40771426 . C . PASS END=40771430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 40771431 . C . PASS END=40771439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 40771440 . C . PASS END=40771440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 40771455 . T . PASS END=40771455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 40771814 . C . PASS END=40771859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1249:0,81,255:34,0 chr1 40773118 . C . PASS END=40773119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 40773120 . C . PASS END=40773120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 40773121 . T . PASS END=40773122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 40773123 . G C, 50.00 PASS DP=25;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=1.312;FractionInformativeReads=0.960;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,15,0:0.625,0.000:24:4,3,0:5,12,0:47:85,0,47,539,324,868:255,0,255:10,0:5.0000e+01,8.9825e-05,4.9713e+01,4.5000e+02,3.5919e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,2,10,5:4,5,8,7 chr1 40773124 . G . PASS END=40773124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:25,0 chr1 40773125 . C . PASS END=40773133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 40773134 . C . PASS END=40773136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 40773137 . G . PASS END=40773141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40773142 . T . PASS END=40773148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 40773149 . T C, 41.85 PASS DP=28;MQ=250.00;MQRankSum=4.181;ReadPosRankSum=2.509;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,9,0:0.321,0.000:28:5,4,0:14,5,0:42:77,0,50,293,651,944:243,0,255:18,0:4.1846e+01,3.0572e-04,5.3000e+01,2.9303e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,5,4:8,11,4,5 chr1 40773150 . G . PASS END=40773152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 40773153 . C . PASS END=40773153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:24,0 chr1 40773154 . C . PASS END=40773171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,961:0,65,255:25,0 chr1 40773375 . C . PASS END=40773428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1133:0,80,255:37,0 chr1 40773864 . C . PASS END=40773917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,105,1519:0,105,255:40,0 chr1 40775600 . G . PASS END=40775600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 40775605 . C . PASS END=40775605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 40775610 . C . PASS END=40775612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 40775613 . G . PASS END=40775613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 40775614 . T . PASS END=40775649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 40775650 . G . PASS END=40775654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 40775655 . T . PASS END=40775663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 40775783 . C . PASS END=40775823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,476:0,42,255:19,0 chr1 40775824 . A . PASS END=40775824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 40775825 . T . PASS END=40775835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 40775836 . C . PASS END=40775836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 40775936 . C . PASS END=40775939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:21,0 chr1 40775940 . T . PASS END=40775942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 40775943 . C . PASS END=40775953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 40775954 . T . PASS END=40775955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:21,0 chr1 40775956 . C . PASS END=40775959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 40775960 . G . PASS END=40775960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 40775961 . C . PASS END=40775963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 40775964 . G . PASS END=40775967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 40775968 . A . PASS END=40775977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr1 40775978 . G . PASS END=40775989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,714:0,57,255:19,0 chr1 40776386 . C . PASS END=40776388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 40776389 . T . PASS END=40776400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 40776401 . G . PASS END=40776401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr1 40776402 . C . PASS END=40776413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 40776414 . G . PASS END=40776416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 40776417 . G . PASS END=40776417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:26,0 chr1 40776418 . C . PASS END=40776422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40776423 . A . PASS END=40776423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr1 40776424 . C . PASS END=40776439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1027:0,87,255:30,0 chr1 40776765 . C . PASS END=40776818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:38:0,86,1482:0,86,255:40,0 chr1 40776902 . C . PASS END=40776957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1305:0,98,255:39,0 chr1 40776958 . A . PASS END=40776958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:31,0 chr1 40777160 . C . PASS END=40777191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:86:47:0,86,1545:0,86,255:40,0 chr1 40777192 . C . PASS END=40777192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:68:54:0,68,1756:0,68,255:40,0 chr1 40777193 . C . PASS END=40777219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,101,1644:0,101,255:40,0 chr1 40777229 . G . PASS END=40777229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 40777334 . A . PASS END=40777368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 40777369 . C . PASS END=40777369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 40777370 . A . PASS END=40777375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 40777376 . T . PASS END=40777378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 40777379 . A . PASS END=40777387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 40777719 . G . PASS END=40777719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 40777731 . C . PASS END=40777740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1170:0,96,255:32,0 chr1 40777741 . C . PASS END=40777741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:31,0 chr1 40777742 . G . PASS END=40777768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:32,0 chr1 40777769 . C . PASS END=40777770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:26,0 chr1 40777771 . G . PASS END=40777771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 40777772 . G . PASS END=40777784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:26:0,66,990:0,78,255:26,0 chr1 40777800 . T . PASS END=40777800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,681:0,58,255:21,0 chr1 40778128 . A . PASS END=40778131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 40778132 . G . PASS END=40778132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 40778133 . G . PASS END=40778142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 40778143 . A . PASS END=40778145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40778146 . A . PASS END=40778146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:27,0 chr1 40778147 . G . PASS END=40778147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40778148 . G . PASS END=40778149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40778150 . C . PASS END=40778151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40778246 . C . PASS END=40778259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 40778260 . G . PASS END=40778281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 40778403 . C . PASS END=40778425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr1 40778426 . G . PASS END=40778426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 40778427 . G . PASS END=40778440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 40778441 . T . PASS END=40778441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 40778442 . G . PASS END=40778456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 40779877 . A . PASS END=40779877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 40779878 . T . PASS END=40779878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 40779879 . C . PASS END=40779889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,826:0,69,255:25,0 chr1 40779890 . T . PASS END=40779890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:22,0 chr1 40779891 . T . PASS END=40779894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 40779895 . G . PASS END=40779908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 40779909 . G . PASS END=40779909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 40779910 . C . PASS END=40779913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 40779914 . G . PASS END=40779914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 40779915 . C . PASS END=40779939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,987:0,87,255:32,0 chr1 40780019 . C . PASS END=40780019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 40780022 . A . PASS END=40780022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 40780024 . C . PASS END=40780059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1172:0,83,255:33,0 chr1 40781262 . G . PASS END=40781275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,889:0,62,255:26,0 chr1 40781276 . A . PASS END=40781309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1017:0,84,255:30,0 chr1 40781310 . G . PASS END=40781321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 40781322 . T . PASS END=40781322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 40781323 . C . PASS END=40781325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 40781326 . G . PASS END=40781326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 40781327 . G . PASS END=40781336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,848:0,72,255:24,0 chr1 40782795 . A . PASS END=40782823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 40782824 . G . PASS END=40782848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:18:0,49,668:0,49,255:19,0 chr1 40782849 . G . PASS END=40782849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 40782850 . G . PASS END=40782869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 40782896 . G . PASS END=40782896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 40828054 . A . PASS END=40828070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1311:0,108,255:36,0 chr1 40828071 . A . PASS END=40828071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1287:0,64,255:30,0 chr1 40828072 . C . PASS END=40828095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1216:0,83,255:32,0 chr1 40828096 . T . PASS END=40828096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 40828097 . T . PASS END=40828108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:30,0 chr1 40839793 . A . PASS END=40839807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,568:0,41,255:19,0 chr1 40839808 . G . PASS END=40839812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 40839813 . G . PASS END=40839813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 40839814 . G . PASS END=40839818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 40839819 . G . PASS END=40839819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 40839820 . G . PASS END=40839822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:24,0 chr1 40839823 . C . PASS END=40839823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 40839824 . G . PASS END=40839824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 40839825 . G . PASS END=40839895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1156:0,83,255:34,0 chr1 40840368 . A . PASS END=40840380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,193,255:40,0 chr1 40859089 . A . PASS END=40859164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:77:0,118,1800:0,118,255:40,1 chr1 40859165 . T . PASS END=40859176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:71:0,120,1800:0,149,255:40,0 chr1 40869394 . A . PASS END=40869418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,149,255:40,0 chr1 40872408 . G . PASS END=40872411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 40872412 . G . PASS END=40872412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr1 40872413 . C . PASS END=40872415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1225:0,96,255:32,0 chr1 40872416 . T . PASS END=40872416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:30,0 chr1 40872417 . G . PASS END=40872535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1177:0,80,255:40,0 chr1 40872536 . A . PASS END=40872541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 40874325 . T . PASS END=40874410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:48:0,117,1755:0,132,255:40,0 chr1 40875429 . A . PASS END=40875507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,114,1710:0,131,255:40,0 chr1 40878688 . A . PASS END=40878774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:67:0,120,1800:0,160,255:40,2 chr1 40879831 . C . PASS END=40879845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,135,255:40,0 chr1 40879846 . G . PASS END=40879912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,109,1665:0,109,255:40,0 chr1 40880944 . A . PASS END=40880947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,928:0,84,255:28,0 chr1 40880948 . T . PASS END=40880948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40880949 . C . PASS END=40880955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 40880956 . C . PASS END=40880956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 40880957 . C . PASS END=40880962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 40880963 . C . PASS END=40880963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 40880964 . A . PASS END=40880970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 40880971 . A . PASS END=40880971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,983:0,65,255:31,0 chr1 40880972 . T . PASS END=40880985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1148:0,80,255:32,0 chr1 40880986 . A . PASS END=40880986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr1 40880987 . T . PASS END=40881003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1105:0,93,255:31,0 chr1 40881004 . T . PASS END=40881021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1139:0,80,255:30,0 chr1 40881022 . T . PASS END=40881022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 40881023 . T . PASS END=40881025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 40881026 . A . PASS END=40881040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,71,255:26,0 chr1 40881041 . C G, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,12,0:0,14,0:75:163,78,0,1000,78,1000:255,78,0:0,0:1.2525e+02,7.5250e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,13:0,0,15,11 chr1 40881042 . G . PASS END=40881043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 40881044 . T . PASS END=40881053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,56,255:19,0 chr1 40881848 . G . PASS END=40882013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:34:0,81,1215:0,85,255:40,0 chr1 40882452 . C . PASS END=40882473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 40882474 . G . PASS END=40882474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 40882475 . A . PASS END=40882547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 40882548 . C . PASS END=40882550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,792:0,52,255:19,0 chr1 40882551 . C . PASS END=40882551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 40882552 . A . PASS END=40882552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,2 chr1 40882553 . C . PASS END=40882553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,800:0,6,255:20,2 chr1 40882554 . C . PASS END=40882554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 40882555 . A . PASS END=40882569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 40882570 . T . PASS END=40882580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 40882581 . C . PASS END=40882595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:23,0 chr1 40882596 . C . PASS END=40882596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 40882597 . C . PASS END=40882604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 40882605 . C . PASS END=40882605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 40882606 . C . PASS END=40882608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 40882609 . G . PASS END=40882609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 40882610 . C . PASS END=40882645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,787:0,61,255:23,0 chr1 40882646 . A . PASS END=40882646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 40882647 . T . PASS END=40882648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40882649 . G . PASS END=40882694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 40882695 . C . PASS END=40882695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 40882696 . A . PASS END=40882734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:17,0 chr1 40882735 . G . PASS END=40882735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 40882736 . C . PASS END=40882747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr1 40882748 . C . PASS END=40882748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 40882749 . T . PASS END=40882755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 40882756 . G . PASS END=40882757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 40882758 . A . PASS END=40882758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 40882759 . C . PASS END=40882766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 40882767 . A . PASS END=40882767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 40882768 . G . PASS END=40882768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 40887648 . A . PASS END=40887672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:32:0,89,1180:0,89,255:38,0 chr1 40887673 . A . PASS END=40887673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1296:0,70,255:36,0 chr1 40887674 . C . PASS END=40887773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,99,1438:0,100,255:40,0 chr1 40916634 . A . PASS END=40916637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 40916638 . T . PASS END=40916638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 40916639 . G . PASS END=40916646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 40916647 . T . PASS END=40916647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 40916648 . C . PASS END=40916653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 40916654 . C . PASS END=40916655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 40916656 . C . PASS END=40916666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:17,0 chr1 40916667 . G . PASS END=40916667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 40916668 . A . PASS END=40916670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 40916671 . C . PASS END=40916682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:21,0 chr1 40916683 . T . PASS END=40916683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 40916684 . G . PASS END=40916711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,738:0,63,255:22,0 chr1 40916712 . G . PASS END=40916712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 40916713 . A . PASS END=40916715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 40916716 . G . PASS END=40916738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,637:0,40,255:19,0 chr1 40916739 . A . PASS END=40916739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 40916740 . C . PASS END=40916744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 40916745 . A . PASS END=40916745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 40916746 . T . PASS END=40916752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 40916753 . A . PASS END=40916753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 40916754 . G . PASS END=40916757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:16,0 chr1 40916758 . A . PASS END=40916758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 40916759 . A . PASS END=40916760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 40919875 . C . PASS END=40919879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 40919880 . C . PASS END=40919881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 40919882 . G . PASS END=40919885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 40919886 . C . PASS END=40919888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:30,0 chr1 40919889 . G . PASS END=40919893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 40919894 . T . PASS END=40919894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:30,0 chr1 40919895 . G . PASS END=40919938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:34,0 chr1 40919939 . A . PASS END=40919960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,931:0,64,255:26,0 chr1 40922617 . G . PASS END=40922620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:24:0,64,914:0,64,255:26,0 chr1 40922621 . T . PASS END=40922627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 40922628 . C . PASS END=40922633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,808:0,64,255:26,0 chr1 40922634 . G . PASS END=40922701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1023:0,84,255:35,0 chr1 40922702 . G . PASS END=40922702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr1 40922703 . G . PASS END=40922721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:34,0 chr1 40922722 . T . PASS END=40922722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1000:0,38,255:25,0 chr1 40922723 . A . PASS END=40922723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:25,0 chr1 40922724 . T . PASS END=40922730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 40922731 . C . PASS END=40922743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:20:0,42,630:0,59,255:19,0 chr1 40923013 . C . PASS END=40923018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,159,255:40,0 chr1 40923019 . G A, 44.31 PASS DP=56;MQ=250.00;MQRankSum=6.211;ReadPosRankSum=3.233;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,21,0:0.375,0.000:56:16,13,0:19,8,0:44:79,0,50,722,1244,1966:255,0,255:33,0:4.4309e+01,1.8276e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,16,15,6:20,15,7,14 chr1 40923020 . T . PASS END=40923056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,161,255:40,0 chr1 40923057 . A . PASS END=40923111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:44:0,108,1620:0,124,255:40,0 chr1 40928093 . A . PASS END=40928093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 40928094 . C . PASS END=40928096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 40928097 . G . PASS END=40928097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 40928098 . A . PASS END=40928098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 40928099 . A . PASS END=40928099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 40928100 . G . PASS END=40928100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 40928101 . A . PASS END=40928101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 40928102 . G . PASS END=40928106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,914:0,84,255:29,0 chr1 40928107 . A . PASS END=40928107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 40928108 . C . PASS END=40928112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,995:0,87,255:29,0 chr1 40928113 . A . PASS END=40928113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,965:0,76,255:30,0 chr1 40928114 . C . PASS END=40928116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr1 40928117 . A . PASS END=40928118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 40928119 . G . PASS END=40928137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:34:0,89,1249:0,89,255:40,0 chr1 40928138 . A . PASS END=40928138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:71:47:0,71,1524:0,71,255:40,0 chr1 40928139 . T . PASS END=40928946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:40:0,92,1476:0,92,255:40,0 chr1 40928947 . A . PASS END=40928947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1521:0,61,255:40,0 chr1 40928948 . G . PASS END=40929261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:41:0,99,1485:0,107,255:40,0 chr1 40945034 . A . PASS END=40945034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 40945035 . T . PASS END=40945042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:23,0 chr1 40945043 . C . PASS END=40945043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 40945044 . A . PASS END=40945052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:25,0 chr1 40945053 . T . PASS END=40945053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 40945054 . C . PASS END=40945068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 40945069 . G . PASS END=40945075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 40945076 . A . PASS END=40945078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40945079 . T . PASS END=40945079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:26,0 chr1 40945080 . G . PASS END=40945082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40945083 . T . PASS END=40945093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr1 40945094 . C . PASS END=40945094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40945095 . A . PASS END=40945095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 40945096 . T . PASS END=40945097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 40945098 . C . PASS END=40945098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:27,0 chr1 40945099 . A . PASS END=40945099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 40945100 . A . PASS END=40945101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:27,0 chr1 40945102 . G . PASS END=40945109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr1 40945110 . T . PASS END=40945143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,876:0,61,255:27,0 chr1 40945144 . A . PASS END=40945146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 40945147 . G . PASS END=40945147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,751:0,35,255:17,0 chr1 40945148 . T . PASS END=40945160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,576:0,40,255:18,0 chr1 40947435 . C . PASS END=40947440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 40947441 . T . PASS END=40947441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 40947442 . G . PASS END=40947444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 40947445 . T . PASS END=40947445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 40947446 . C . PASS END=40947457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 40947458 . G . PASS END=40947460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 40947461 . G . PASS END=40947461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 40947462 . T . PASS END=40947463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 40947464 . A . PASS END=40947464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 40947465 . A . PASS END=40947491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,693:0,63,255:23,0 chr1 40947492 . A . PASS END=40947492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,738:0,30,255:21,0 chr1 40947493 . A . PASS END=40947500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 40947501 . C . PASS END=40947501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 40947502 . T . PASS END=40947506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 40947507 . T . PASS END=40947507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 40947508 . C . PASS END=40947521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 40947522 . C . PASS END=40947522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 40947523 . C . PASS END=40947523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 40947524 . C . PASS END=40947526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 40954760 . G . PASS END=40954787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:36,0 chr1 40954788 . T . PASS END=40954788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:34,0 chr1 40954789 . T . PASS END=40954886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1192:0,83,255:40,0 chr1 40955198 . C . PASS END=40955283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:57:0,120,1800:0,130,255:40,0 chr1 40955284 . G . PASS END=40955284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,9:70:60:70:0,60,1842:0,60,255:40,0 chr1 40955285 . A . PASS END=40955296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,165,255:40,0 chr1 40960593 . A . PASS END=40961731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:92:39:0,92,1413:0,92,255:40,1 chr1 40980217 . A . PASS END=40980225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 40980226 . A . PASS END=40980226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:29,0 chr1 40980227 . C . PASS END=40980521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1144:0,84,255:40,0 chr1 40980522 . T . PASS END=40980558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1440:0,111,255:39,0 chr1 40980559 . G A, 164.37 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,21,0:0,18,0:114:202,117,0,1496,117,1496:255,117,0:0,0:1.6437e+02,1.1437e+02,0.0000e+00,4.5000e+02,1.4914e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,21:0,0,22,17 chr1 40980560 . A . PASS END=40980567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 40980568 . G . PASS END=40980570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 40980571 . A . PASS END=40980573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,92,255:28,0 chr1 40980574 . A . PASS END=40980576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,105,255:23,0 chr1 40980577 . C . PASS END=40980591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,993:0,84,255:29,0 chr1 40980592 . C . PASS END=40980592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 40980593 . T . PASS END=40980594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 40980595 . G . PASS END=40980595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:28,0 chr1 40980596 . A . PASS END=40980596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 40980597 . A . PASS END=40980599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 40980600 . T . PASS END=40980600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 40980601 . C . PASS END=40980601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 40980602 . A . PASS END=40980642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr1 40980643 . T . PASS END=40980656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 40980657 . T . PASS END=40980657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 40980658 . C . PASS END=40980660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 40980661 . A . PASS END=40980661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 40980662 . A . PASS END=40980662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 40980663 . C . PASS END=40980663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 40980664 . A . PASS END=40980664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 40980665 . T . PASS END=40980665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 40980666 . A . PASS END=40980671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,979:0,81,255:28,0 chr1 40980672 . G . PASS END=40980673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,992:0,68,255:26,0 chr1 40980674 . T . PASS END=40980674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40980675 . G . PASS END=40980676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1108:0,74,255:26,0 chr1 40980677 . T . PASS END=40980677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 40980678 . T . PASS END=40980678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:26,0 chr1 40980679 . C . PASS END=40980680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 40980681 . T . PASS END=40980681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 40980682 . A . PASS END=40980683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 40980684 . C . PASS END=40980684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 40980685 . C . PASS END=40980685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40980686 . T . PASS END=40980687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 40980688 . C . PASS END=40980689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40980690 . G . PASS END=40980690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 40980691 . T . PASS END=40980693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 40980694 . G . PASS END=40980700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 40980701 . A . PASS END=40980701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:25,0 chr1 40980702 . C . PASS END=40980708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 40980709 . G . PASS END=40980713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,887:0,67,255:26,0 chr1 40980714 . T . PASS END=40980716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40980717 . A . PASS END=40980727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,73,255:25,0 chr1 40980728 . A . PASS END=40980728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 40980729 . A . PASS END=40980730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 40980731 . G T, 132.90 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:83:171,86,0,1034,86,1034:255,87,0:0,0:1.3290e+02,8.2897e+01,0.0000e+00,4.5000e+02,1.1767e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,21:0,0,16,13 chr1 40980732 . G . PASS END=40980732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 40980733 . G . PASS END=40980733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40980734 . A . PASS END=40980734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 40980735 . G . PASS END=40980738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 40980739 . G . PASS END=40980741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 40980742 . C . PASS END=40980742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 40980743 . T . PASS END=40980743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 40980744 . T . PASS END=40980748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 40980749 . T . PASS END=40980750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:26,0 chr1 40980751 . G . PASS END=40980754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 40980755 . T . PASS END=40980767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,937:0,65,255:26,0 chr1 40980768 . G . PASS END=40980768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 40980769 . C . PASS END=40980820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1103:0,87,255:34,0 chr1 40980821 . G . PASS END=40980821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:33,0 chr1 40980822 . C . PASS END=40980822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:41:0,85,1482:0,85,255:35,0 chr1 40980823 . C . PASS END=40980823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:34,0 chr1 40980824 . C . PASS END=40980845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,102,1530:0,108,255:36,0 chr1 40980846 . G . PASS END=40980846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 40980847 . A . PASS END=40981194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:37:0,81,1282:0,81,255:40,2 chr1 40981195 . A . PASS END=40981195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:66:56:0,66,1859:0,66,255:40,0 chr1 40981196 . T . PASS END=40981329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:29:0,80,1161:0,80,255:40,0 chr1 40981330 . G . PASS END=40981330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:26,0 chr1 40981331 . C . PASS END=40981337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 40981338 . A . PASS END=40981338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 40998839 . A . PASS END=40998848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:74:0,120,1800:0,209,255:40,0 chr1 40998849 . T . PASS END=40998853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:75:0,120,1800:0,186,255:40,0 chr1 41006258 . G . PASS END=41006259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:26,0 chr1 41006260 . A . PASS END=41006353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1008:0,81,255:40,0 chr1 41006354 . T . PASS END=41006354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr1 41006355 . T . PASS END=41006358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 41006359 . G . PASS END=41006376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,886:0,64,255:26,0 chr1 41006377 . C . PASS END=41006378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41006379 . C . PASS END=41006384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 41007287 . G . PASS END=41007365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:38:0,98,1338:0,98,255:40,0 chr1 41007366 . A . PASS END=41007382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,134,255:40,0 chr1 41012234 . A . PASS END=41012235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 41012236 . T . PASS END=41012236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1331:0,71,255:36,0 chr1 41012237 . C . PASS END=41013132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:36:0,82,1226:0,82,255:40,0 chr1 41092189 . T . PASS END=41092211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,815:0,66,255:26,0 chr1 41092212 . C . PASS END=41092335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1000:0,81,255:40,0 chr1 41092336 . C . PASS END=41092336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:31,0 chr1 41092337 . A . PASS END=41092349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1180:0,91,255:31,0 chr1 41092350 . T . PASS END=41092350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 41092351 . G . PASS END=41092354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 41092355 . A . PASS END=41092373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:26,0 chr1 41092374 . T . PASS END=41092374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 41092375 . G . PASS END=41092389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:21,0 chr1 41092390 . C . PASS END=41092401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 41094482 . C . PASS END=41094488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 41094489 . A . PASS END=41094511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,799:0,63,255:26,0 chr1 41094512 . A . PASS END=41094521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:29,0 chr1 41094522 . G . PASS END=41094522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 41094523 . C . PASS END=41094533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 41094534 . A . PASS END=41094534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 41094535 . G . PASS END=41094535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 41094536 . G . PASS END=41094536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr1 41094537 . G . PASS END=41094577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,976:0,82,255:33,0 chr1 41094578 . C . PASS END=41094578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 41094579 . A . PASS END=41094585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 41094586 . C . PASS END=41094586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 41094587 . C . PASS END=41094589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 41094590 . A . PASS END=41094590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 41094591 . T . PASS END=41094595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 41094596 . C . PASS END=41094596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:24,0 chr1 41094597 . A . PASS END=41094603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,998:0,68,255:26,0 chr1 41094604 . A . PASS END=41094604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:23,0 chr1 41094605 . A . PASS END=41094612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,889:0,67,255:24,0 chr1 41094613 . T . PASS END=41094613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:22,0 chr1 41094614 . A . PASS END=41094621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:24,0 chr1 41094943 . C . PASS END=41094944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 41094945 . G . PASS END=41094945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:23,0 chr1 41094946 . G . PASS END=41094950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,976:0,78,255:26,0 chr1 41094951 . G . PASS END=41094951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 41094952 . A . PASS END=41094952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 41094953 . T . PASS END=41094953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,934:0,56,255:28,0 chr1 41094954 . T . PASS END=41094955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 41094956 . G . PASS END=41094956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 41094957 . G . PASS END=41094960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 41094961 . C . PASS END=41094961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 41094962 . T . PASS END=41094966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,968:0,87,255:29,0 chr1 41094967 . T . PASS END=41094968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 41094969 . G . PASS END=41094989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1101:0,80,255:30,0 chr1 41094990 . A . PASS END=41094990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:29,0 chr1 41094991 . T . PASS END=41094999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 41095000 . C . PASS END=41095000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 41095001 . C . PASS END=41095002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 41095003 . C . PASS END=41095003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 41095004 . C . PASS END=41095016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 41095017 . C . PASS END=41095017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 41095018 . G . PASS END=41095025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:27,0 chr1 41095026 . A . PASS END=41095040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,915:0,64,255:26,0 chr1 41095041 . T . PASS END=41095041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,705:0,6,255:20,0 chr1 41095042 . C . PASS END=41095044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 41098741 . C . PASS END=41098741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 41098742 . C . PASS END=41098742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 41098743 . A . PASS END=41098747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,867:0,81,255:30,0 chr1 41098748 . T . PASS END=41098748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 41098749 . G . PASS END=41098808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:31:0,92,1103:0,92,255:36,0 chr1 41098809 . C . PASS END=41098809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:34,0 chr1 41098810 . T . PASS END=41098842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1186:0,83,255:35,0 chr1 41098843 . G . PASS END=41098848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr1 41098849 . T . PASS END=41098853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 41101588 . G . PASS END=41101593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 41101594 . T . PASS END=41101594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:29,0 chr1 41101595 . C . PASS END=41101609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1268:0,87,255:39,0 chr1 41101610 . T . PASS END=41101702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:38:0,87,1382:0,87,255:40,0 chr1 41101703 . T . PASS END=41101703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:31,0 chr1 41101704 . G . PASS END=41101713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1215:0,92,255:32,0 chr1 41101714 . T . PASS END=41101714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 41101715 . T . PASS END=41101719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 41101720 . G . PASS END=41101729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,74,255:25,0 chr1 41107381 . C . PASS END=41107383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 41107384 . G . PASS END=41107384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 41107385 . C . PASS END=41107397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 41107398 . A . PASS END=41107416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,582:0,45,255:19,0 chr1 41107417 . G . PASS END=41107457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:21:0,61,762:0,61,255:26,0 chr1 41107458 . C . PASS END=41107469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 41107470 . T . PASS END=41107470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,960:0,68,255:26,0 chr1 41107471 . T . PASS END=41107472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41107473 . G . PASS END=41107496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 41107497 . C . PASS END=41107497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 41107498 . C . PASS END=41107501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 41107502 . T . PASS END=41107502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 41107503 . T . PASS END=41107505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 41107506 . T . PASS END=41107506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 41107507 . G . PASS END=41107535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,900:0,61,255:24,0 chr1 41107536 . G . PASS END=41107568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,49,255:19,0 chr1 41107569 . G . PASS END=41107575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 41107576 . G . PASS END=41107576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 41107577 . A . PASS END=41107596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 41107597 . T . PASS END=41107597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 41113340 . C . PASS END=41113344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr1 41113345 . T . PASS END=41113345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 41113346 . G . PASS END=41113355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:19,0 chr1 41113356 . A . PASS END=41113358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 41113359 . C . PASS END=41113360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 41113361 . G . PASS END=41113361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 41113362 . G . PASS END=41113362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 41113363 . T . PASS END=41113363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 41113364 . G . PASS END=41113364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 41113365 . T . PASS END=41113367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:25,0 chr1 41113368 . C . PASS END=41113368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 41113369 . G . PASS END=41113373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,911:0,62,255:26,0 chr1 41113374 . A . PASS END=41113514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1039:0,84,255:40,0 chr1 41157628 . C . PASS END=41157633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 41157634 . T . PASS END=41157634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr1 41157635 . C . PASS END=41157640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 41157641 . G . PASS END=41157642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 41157643 . G . PASS END=41157645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 41157646 . C . PASS END=41157649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 41157650 . G . PASS END=41157650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 41157651 . C . PASS END=41157651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 41157652 . T . PASS END=41157663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 41157664 . C . PASS END=41157664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 41157665 . G . PASS END=41157667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 41157668 . C . PASS END=41157668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 41157669 . T . PASS END=41157671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 41157672 . C . PASS END=41157679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr1 41157680 . A . PASS END=41157680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:12,0 chr1 41157681 . T . PASS END=41157681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 41196227 . A . PASS END=41196278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:84:0,120,1800:0,211,255:40,0 chr1 41201173 . A . PASS END=41201321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1155:0,80,255:40,0 chr1 41201322 . A . PASS END=41201322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1150:0,71,255:29,0 chr1 41201323 . T . PASS END=41201332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 41201333 . G . PASS END=41201333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 41201334 . C . PASS END=41201335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 41201336 . A . PASS END=41201339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 41201340 . T . PASS END=41201340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41201341 . G . PASS END=41201366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 41201367 . T . PASS END=41201373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,687:0,55,255:19,0 chr1 41201374 . G . PASS END=41201374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 41201375 . G . PASS END=41201375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 41201376 . C . PASS END=41201379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 41201380 . T . PASS END=41201391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:19,0 chr1 41201392 . G . PASS END=41201396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 41201397 . C . PASS END=41201397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:18:0,24,360:0,54,255:8,0 chr1 41201398 . T . PASS END=41201422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,156:0,15,156:6,0 chr1 41204508 . T . PASS END=41204620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:35:0,90,1221:0,94,255:40,0 chr1 41213206 . A . PASS END=41213277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,117,1755:0,131,255:40,0 chr1 41215245 . A . PASS END=41215358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:31:0,93,1142:0,93,255:40,0 chr1 41218823 . A . PASS END=41218918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,113,1800:0,113,255:40,0 chr1 41223793 . G . PASS END=41223793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 41223794 . A . PASS END=41223798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,653:0,54,255:19,0 chr1 41223799 . G . PASS END=41223807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 41223808 . T . PASS END=41223808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 41223809 . C . PASS END=41223833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:26,0 chr1 41223834 . G . PASS END=41223947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1166:0,87,255:40,0 chr1 41223948 . A . PASS END=41223965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:25,0 chr1 41223966 . G . PASS END=41223966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 41228560 . A . PASS END=41228717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1188:0,85,255:40,0 chr1 41228718 . G . PASS END=41228718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:28,0 chr1 41232268 . G . PASS END=41232280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,900:0,66,255:24,0 chr1 41232281 . C . PASS END=41232281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 41232282 . C . PASS END=41232288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr1 41232289 . C . PASS END=41232299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1016:0,81,255:32,0 chr1 41232300 . C . PASS END=41232300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 41232301 . C . PASS END=41232375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:33:0,99,1230:0,99,255:40,0 chr1 41232590 . G . PASS END=41232646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:43:0,90,1424:0,90,255:40,0 chr1 41235028 . A . PASS END=41235087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,141,255:40,0 chr1 41236069 . A . PASS END=41236086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:18,0 chr1 41236087 . G . PASS END=41236088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 41236089 . T . PASS END=41236089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 41236090 . C . PASS END=41236124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,670:0,60,255:24,0 chr1 41236125 . A . PASS END=41236125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:20,0 chr1 41236126 . G . PASS END=41236127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 41236128 . A . PASS END=41236128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 41236129 . G . PASS END=41236137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 41236138 . A . PASS END=41236138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 41236139 . C . PASS END=41236173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,917:0,64,255:25,0 chr1 41236174 . A . PASS END=41236174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,823:0,23,255:20,0 chr1 41236175 . C . PASS END=41236199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:23,2 chr1 41236200 . T . PASS END=41236200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 41236201 . G . PASS END=41236202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 41236203 . T . PASS END=41236203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 41236204 . G . PASS END=41236204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 41236205 . C . PASS END=41236205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 41236206 . C . PASS END=41236206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 41236207 . T . PASS END=41236207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 41236208 . C . PASS END=41236219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:23,0 chr1 41236220 . G . PASS END=41236220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 41236221 . C . PASS END=41236225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 41236226 . A . PASS END=41236231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,56,255:18,0 chr1 41236232 . A . PASS END=41236232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:18,0 chr1 41236233 . G . PASS END=41236254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,487:0,40,255:19,0 chr1 41236255 . C . PASS END=41236256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 41236257 . T . PASS END=41236257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 41236258 . T . PASS END=41236267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 41236268 . T . PASS END=41236268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,705:0,57,255:19,0 chr1 41236269 . G . PASS END=41236270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 41236271 . A . PASS END=41236273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 41236274 . G . PASS END=41236276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 41236277 . T . PASS END=41236277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 41236278 . G . PASS END=41236293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 41236294 . G . PASS END=41236315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,584:0,40,255:19,0 chr1 41236316 . C . PASS END=41236324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 41236325 . A . PASS END=41236328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 41236329 . G . PASS END=41236348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,762:0,66,255:22,0 chr1 41236349 . T . PASS END=41236358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,810:0,53,255:19,0 chr1 41236359 . C . PASS END=41236359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 41236360 . T . PASS END=41236360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 41236361 . C . PASS END=41236361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 41236362 . T . PASS END=41236365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 41236366 . C . PASS END=41236366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 41236367 . T . PASS END=41236411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 41236412 . C . PASS END=41236413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 41236414 . G . PASS END=41236422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 41236423 . G . PASS END=41236431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 41236432 . C . PASS END=41236485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:19,0 chr1 41236486 . G . PASS END=41236486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 41236487 . T . PASS END=41236487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 41236488 . G . PASS END=41236489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 41236490 . C . PASS END=41236490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 41236491 . C . PASS END=41236500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 41237056 . G . PASS END=41237157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1117:0,80,255:40,0 chr1 41249752 . G . LowDepth;LowGQ END=41249752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 41249766 . A . LowDepth;LowGQ END=41249787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 41249788 . G . LowGQ END=41249894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:3,0 chr1 41249895 . C . PASS END=41249901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,116:3,0 chr1 41249902 . G . PASS END=41249931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr1 41249932 . C A, 0.33 DRAGENSnpHardQUAL DP=5;MQ=250.00;MQRankSum=0.731;ReadPosRankSum=-0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:2,1,0:2,0,0:11:24,0,50,36,143,179:24,0,140:4,0:3.2901e-01,1.1370e+01,6.4370e+01,4.7138e+01,1.8923e+02,1.9323e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,0,1:2,2,0,1 chr1 41249933 . G . PASS END=41249937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 41249938 . T . PASS END=41249969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 41249970 . T . PASS END=41249984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr1 41249985 . T . PASS END=41249985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 41249986 . C . PASS END=41250028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 41250029 . C . PASS END=41250029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 41250030 . A . PASS END=41250030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 41250031 . A . PASS END=41250032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 41250033 . G . PASS END=41250057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 41250058 . C . PASS END=41250058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 41250059 . C . PASS END=41250060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 41250061 . T . PASS END=41250077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 41250078 . A . PASS END=41250079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 41282937 . A . PASS END=41282965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1203:0,88,255:39,0 chr1 41282966 . T . PASS END=41282966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1413:0,74,255:39,0 chr1 41282967 . G . PASS END=41283027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:39:0,87,1358:0,87,255:40,0 chr1 41283836 . G . PASS END=41283846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,814:0,62,255:26,0 chr1 41283847 . G . PASS END=41283942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,992:0,81,255:36,0 chr1 41283943 . A . PASS END=41283943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 41283944 . A . PASS END=41283946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 41283947 . C . PASS END=41283948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 41283949 . C . PASS END=41283951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,944:0,49,255:25,1 chr1 41283952 . C . PASS END=41283960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:25,0 chr1 41283961 . C . PASS END=41283962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:18,0 chr1 41284177 . A . PASS END=41284198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,238:9,0 chr1 41284199 . G . PASS END=41284199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 41284200 . G . PASS END=41284201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 41284202 . G . PASS END=41284226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 41284227 . G . PASS END=41284227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 41284228 . G . PASS END=41284233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 41284234 . T . PASS END=41284234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 41284235 . C . PASS END=41284239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 41284240 . C . PASS END=41284240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 41284241 . C . PASS END=41284267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 41284268 . C . PASS END=41284273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 41284274 . G . PASS END=41284304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:20:8:0,20,280:0,20,255:9,0 chr1 41284305 . G A, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:6,1,0:1,0,0:20:15,0,50,36,250,286:15,0,239:7,0:4.2461e-02,2.0120e+01,7.3120e+01,5.5880e+01,3.0490e+02,3.0889e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,0,1:4,3,0,1 chr1 41284306 . G . PASS END=41284318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 41284319 . G . PASS END=41284319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 41284320 . C . PASS END=41284352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 41284361 . T . PASS END=41284361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 41285019 . G . PASS END=41285049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,113,1504:0,113,255:40,0 chr1 41285050 . T . PASS END=41285086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,145,255:40,0 chr1 41285087 . T C, 239.15 PASS DP=64;MQ=249.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,38,0:0,26,0:189:277,192,0,2444,192,2444:255,196,0:0,0:2.3915e+02,1.8915e+02,0.0000e+00,4.5000e+02,2.2392e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,31:0,0,33,31 chr1 41285088 . G . PASS END=41285124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:59:0,120,1800:0,163,255:40,0 chr1 41285125 . A . PASS END=41285144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,120,1800:0,138,255:40,0 chr1 41285547 . A . PASS END=41285549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 41285550 . A . PASS END=41285550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 41285551 . C . PASS END=41285562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,780:0,69,255:25,0 chr1 41285563 . T . PASS END=41285563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:23,0 chr1 41285564 . C . PASS END=41285570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,939:0,78,255:26,0 chr1 41285571 . G . PASS END=41285581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:31,0 chr1 41285582 . A . PASS END=41285582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 41285583 . C . PASS END=41285623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr1 41285624 . C . PASS END=41285627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 41285628 . C . PASS END=41285629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 41285630 . G . PASS END=41285630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 41285631 . G . PASS END=41285633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 41285634 . A . PASS END=41285634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:26,0 chr1 41285635 . T . PASS END=41285636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,968:0,68,255:26,0 chr1 41285637 . T . PASS END=41285637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,867:0,34,255:23,0 chr1 41285638 . C . PASS END=41285644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,874:0,67,255:25,0 chr1 41285645 . T . PASS END=41285645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr1 41285646 . G . PASS END=41285657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 41285834 . T . PASS END=41285834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 41285837 . G . PASS END=41285933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1188:0,83,255:38,0 chr1 41287984 . A . PASS END=41287984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 41287986 . G . PASS END=41287993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 41287994 . G . PASS END=41287994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 41287995 . C . PASS END=41288019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 41288020 . G . PASS END=41288027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 41288028 . C . PASS END=41288028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 41288029 . T . PASS END=41288036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 41288037 . A . PASS END=41288039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 41288040 . T . PASS END=41288049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 41288050 . A . PASS END=41288050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 41288051 . T . PASS END=41288068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 41288069 . C . PASS END=41288074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 41289769 . A . PASS END=41289769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 41289770 . G . PASS END=41289781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 41289782 . T . PASS END=41289782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 41289783 . T . PASS END=41289844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,327:0,30,255:13,0 chr1 41289845 . C . PASS END=41289847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 41289848 . G . PASS END=41289887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 41289888 . C . PASS END=41289898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 41289899 . C . PASS END=41289910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 41289911 . T . PASS END=41289916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 41289917 . T . PASS END=41289920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 41289921 . C . PASS END=41289930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 41292310 . C . PASS END=41292336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,583:0,51,255:18,0 chr1 41292337 . C . PASS END=41292337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 41292338 . T . PASS END=41292349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 41292350 . G . PASS END=41292350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 41292351 . C . PASS END=41292364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 41292365 . A . PASS END=41292366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 41296756 . C . PASS END=41296756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 41296757 . A . PASS END=41296757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 41296758 . G . PASS END=41296764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 41296765 . G . PASS END=41296765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 41296766 . G . PASS END=41296766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 41296767 . G . PASS END=41296767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 41296768 . C . PASS END=41296774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 41296775 . G . PASS END=41296775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 41296776 . A . PASS END=41296776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 41296777 . C . PASS END=41296777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 41296778 . C . PASS END=41296778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 41296779 . G . PASS END=41296779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 41296780 . C . PASS END=41296783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:26,0 chr1 41296784 . C . PASS END=41296786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 41296787 . A . PASS END=41296790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 41296791 . G . PASS END=41296793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 41296794 . G . PASS END=41296809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr1 41296810 . G . PASS END=41296810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 41296811 . G . PASS END=41296827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1180:0,86,255:33,0 chr1 41296828 . T G, 49.93 PASS DP=35;MQ=248.01;MQRankSum=5.033;ReadPosRankSum=4.043;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:9,10,0:9,7,0:48:85,0,50,542,570,1113:255,0,255:18,0:4.9934e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,11,6:11,7,12,5 chr1 41296829 . C . PASS END=41296865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1143:0,87,255:36,0 chr1 41296866 . A . PASS END=41296875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1163:0,80,255:30,0 chr1 41296876 . T . PASS END=41296876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 41296877 . G . PASS END=41296877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 41296878 . A . PASS END=41296878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1139:0,66,255:29,0 chr1 41296879 . G . PASS END=41296886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:30,0 chr1 41296887 . G . PASS END=41296887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr1 41296888 . C . PASS END=41296925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1103:0,80,255:32,0 chr1 41296926 . G . PASS END=41296926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1049:0,44,255:27,0 chr1 41296927 . C . PASS END=41296927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 41296928 . A . PASS END=41296929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1124:0,77,255:27,0 chr1 41296930 . C . PASS END=41296931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 41296932 . G . PASS END=41296937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 41296938 . G . PASS END=41296938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr1 41296939 . G . PASS END=41296948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,970:0,63,255:26,0 chr1 41296949 . A . PASS END=41296949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 41296950 . G . PASS END=41296961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:24:0,63,945:0,71,255:23,0 chr1 41296962 . G . PASS END=41296962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 41296963 . C . PASS END=41296967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 41296968 . C . PASS END=41296972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 41296973 . G . PASS END=41296976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 41298686 . A . PASS END=41298689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1189:0,83,255:33,0 chr1 41298690 . C . PASS END=41298757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1205:0,86,255:40,0 chr1 41298758 . C . PASS END=41298758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:37,0 chr1 41298759 . T . PASS END=41298782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,99,255:38,0 chr1 41298783 . C . PASS END=41298785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 41300639 . G . PASS END=41300640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 41300641 . T . PASS END=41300645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 41300646 . A . PASS END=41300646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 41300647 . A . PASS END=41300648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 41300649 . T . PASS END=41300649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 41300650 . T . PASS END=41300663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 41300664 . A . PASS END=41300664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 41300665 . G . PASS END=41300668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 41300669 . A . PASS END=41300669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 41300670 . T . PASS END=41300675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 41300676 . G . PASS END=41300679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:21,0 chr1 41300680 . C . PASS END=41300691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 41300692 . A . PASS END=41300692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 41300693 . C . PASS END=41300718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 41300719 . A . PASS END=41300747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:19,0 chr1 41300748 . C . PASS END=41300763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,42,255:13,0 chr1 41300764 . A . PASS END=41300764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 41300765 . A . PASS END=41300765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 41300766 . A . PASS END=41300766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr1 41300767 . C . PASS END=41300770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 41303337 . G . PASS END=41303337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 41303338 . G . PASS END=41303338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 41303339 . T . PASS END=41303339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 41303340 . G . PASS END=41303340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 41303341 . G . PASS END=41303341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 41303342 . A . PASS END=41303347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:26,0 chr1 41303348 . T . PASS END=41303348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:24,0 chr1 41303349 . T . PASS END=41303353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:27,0 chr1 41303354 . G . PASS END=41303356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr1 41303357 . G . PASS END=41303357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 41303358 . G . PASS END=41303359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 41303360 . G . PASS END=41303360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 41303361 . G . PASS END=41303372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:31,0 chr1 41303373 . G . PASS END=41303373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 41303374 . A . PASS END=41303441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1141:0,81,255:38,0 chr1 41303442 . A . PASS END=41303442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:33,0 chr1 41303443 . C . PASS END=41303461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:33,0 chr1 41303462 . A . PASS END=41303466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 41303975 . G . PASS END=41303975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 41303983 . G . PASS END=41303983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 41303984 . T . PASS END=41303984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 41303985 . G . PASS END=41304001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:23,0 chr1 41304002 . A . PASS END=41304002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 41304003 . G . PASS END=41304019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,941:0,75,255:26,0 chr1 41304020 . G . PASS END=41304032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:31,0 chr1 41304033 . C . PASS END=41304033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 41304034 . T . PASS END=41304184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1260:0,87,255:40,0 chr1 41304185 . A . PASS END=41304185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1135:0,75,255:27,0 chr1 41304186 . C . PASS END=41304187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:29,0 chr1 41304188 . T . PASS END=41304195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:29:0,72,1080:0,87,255:24,0 chr1 41304202 . T . PASS END=41304202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:23,0 chr1 41327245 . T . PASS END=41327259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 41327260 . G . PASS END=41327260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 41327261 . C . PASS END=41327271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 41327272 . C . PASS END=41327340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,366:0,30,255:13,0 chr1 41327341 . G . PASS END=41327348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,402:0,20,255:9,0 chr1 41327349 . G . PASS END=41327353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:11,0 chr1 41327354 . A . LowGQ END=41327354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr1 41327355 . G . PASS END=41327366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 41327367 . G . PASS END=41327367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 41327368 . C . PASS END=41327376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 41327377 . C . PASS END=41327383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 41327384 . T . PASS END=41327384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 41327385 . C . PASS END=41327394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 41327395 . T . PASS END=41327395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,288:0,16,255:10,0 chr1 41327396 . T . PASS END=41327405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 41327406 . T . PASS END=41327419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:7:0,15,225:0,17,249:6,0 chr1 41327420 . T . LowGQ END=41327420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:18,0,204:5,0 chr1 41327421 . G . PASS END=41327427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,188:5,0 chr1 41327428 . C . PASS END=41327455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,55:3,0 chr1 41327456 . G . LowGQ END=41327556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:3,0 chr1 41327557 . C . PASS END=41327579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 41327580 . G . PASS END=41327601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 41327602 . G . PASS END=41327676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 41327677 . G . PASS END=41327677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 41327678 . T . LowGQ END=41327678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 41327679 . C . PASS END=41327706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 41327707 . A . PASS END=41327749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 41327750 . G . PASS END=41327751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 41327752 . C . PASS END=41327781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 41327782 . C . PASS END=41327791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr1 41327792 . T . PASS END=41327799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 41447659 . A . PASS END=41447666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,194,255:40,0 chr1 41448950 . G . PASS END=41449128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:34:0,84,1248:0,100,255:40,1 chr1 41450493 . G . PASS END=41450663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:34:0,92,1288:0,92,255:40,0 chr1 41453044 . T . PASS END=41453144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,120,1800:0,137,255:40,0 chr1 41454266 . C . PASS END=41454382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,102,1305:0,111,255:40,0 chr1 41456837 . C . PASS END=41456851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,101,1675:0,101,255:40,0 chr1 41456852 . G . PASS END=41456920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,127,255:40,0 chr1 41457437 . G . PASS END=41457517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:44:0,120,1800:0,123,255:40,0 chr1 41461589 . G . PASS END=41461595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 41461596 . G . PASS END=41461607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,837:0,63,255:23,0 chr1 41461608 . T . PASS END=41461608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 41461609 . C . PASS END=41461618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,892:0,62,255:26,0 chr1 41461619 . T . PASS END=41461625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,873:0,81,255:29,0 chr1 41461626 . T . PASS END=41461626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 41461627 . C . PASS END=41461628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1108:0,87,255:31,0 chr1 41461629 . C . PASS END=41461629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 41461630 . C . PASS END=41461631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1044:0,93,255:31,0 chr1 41461632 . T . PASS END=41461632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1027:0,60,255:29,0 chr1 41461633 . G . PASS END=41461668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1141:0,93,255:36,0 chr1 41461669 . T . PASS END=41461669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:35,0 chr1 41461670 . C . PASS END=41461673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1304:0,94,255:36,0 chr1 41461674 . G . PASS END=41461674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:34,0 chr1 41461675 . A . PASS END=41461695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:32:0,93,1140:0,95,255:35,0 chr1 41461696 . G . PASS END=41461696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr1 41461697 . C . PASS END=41461698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 41461699 . G . PASS END=41461699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 41461700 . C . PASS END=41461729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr1 41461730 . A . PASS END=41461740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1045:0,71,255:26,0 chr1 41463066 . A . PASS END=41463066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:24,0 chr1 41463067 . T . PASS END=41463078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,925:0,62,255:26,0 chr1 41463079 . C . PASS END=41463198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1147:0,80,255:40,0 chr1 41465502 . T . PASS END=41465504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 41466645 . A . PASS END=41466680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:96:58:0,96,1440:0,164,255:40,0 chr1 41466681 . CCT C, 49.99 PASS DP=68;MQ=250.00;MQRankSum=7.029;ReadPosRankSum=-0.320;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,33,0:0.493,0.000:67:23,16,0:11,17,0:48:79,0,50,1386,1764,3150:255,0,255:32,49:4.9985e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:11,23,14,19:20,14,17,16 chr1 41466682 . C . LowGQ END=41466684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:34,49:83:0:69:0,0,0:255,0,255:40,49 chr1 41466685 . T . PASS END=41466689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,194,255:40,0 chr1 41466701 . T . PASS END=41466729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,168,255:40,0 chr1 41466730 . C . PASS END=41466765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,167,255:40,0 chr1 41466766 . T . PASS END=41466789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:36:0,84,1260:0,108,255:40,0 chr1 41467827 . T . PASS END=41467827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 41467832 . T . PASS END=41467926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,136,255:40,0 chr1 41468786 . G . PASS END=41468848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,120,1800:0,129,255:40,0 chr1 41469653 . G . PASS END=41469665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 41469666 . A C, 71.11 PASS DP=8;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,4,0:0,4,0:21:109,24,0,302,24,302:255,24,0:0,0:7.1109e+01,2.1109e+01,3.3789e-02,2.9914e+02,5.5879e+01,3.0214e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,3:0,0,3,5 chr1 41469667 . C . PASS END=41469681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr1 41469682 . C . PASS END=41469698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:11,0 chr1 41469699 . T . PASS END=41469699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 41469700 . A . PASS END=41469703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 41469704 . G . PASS END=41469706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 41469707 . C . PASS END=41469713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 41469714 . T . PASS END=41469714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 41469715 . G . PASS END=41469732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 41469733 . A . PASS END=41469743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41469744 . C . PASS END=41469744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 41469745 . A . PASS END=41469784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr1 41469785 . G . PASS END=41469786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 41471723 . A . PASS END=41471766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,168,255:40,0 chr1 41473121 . G . PASS END=41473203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:40,0 chr1 41473204 . G . PASS END=41473217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,880:0,64,255:26,0 chr1 41474331 . G . PASS END=41474386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,107,1355:0,107,255:40,0 chr1 41474466 . G . PASS END=41474531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:40:0,84,1198:0,84,255:40,0 chr1 41474532 . G . PASS END=41474534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:69:40:0,69,1353:0,69,255:37,1 chr1 41474535 . G . PASS END=41474535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:15:40:0,15,1153:0,15,255:35,0 chr1 41474536 . A . PASS END=41474538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1216:0,84,255:38,0 chr1 41474539 . G . PASS END=41474539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1171:0,69,255:36,0 chr1 41474540 . A . PASS END=41474541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 41474542 . T . PASS END=41474542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1122:0,67,255:35,0 chr1 41474543 . G . PASS END=41474543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1288:0,84,255:36,0 chr1 41474544 . G . PASS END=41474544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1135:0,50,255:34,0 chr1 41474545 . A . PASS END=41474549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1199:0,81,255:38,0 chr1 41474550 . G . PASS END=41474550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr1 41474551 . T . PASS END=41474562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,98,255:31,0 chr1 41475117 . A . PASS END=41475117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:25,0 chr1 41475118 . T . PASS END=41475118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:26,0 chr1 41475119 . C . PASS END=41475122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41475123 . C . PASS END=41475131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,958:0,84,255:28,0 chr1 41475132 . T . PASS END=41475134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 41475135 . G . PASS END=41475265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1260:0,84,255:40,0 chr1 41475267 . C . PASS END=41475267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 41475832 . G . PASS END=41475917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:43:0,120,1800:0,120,255:40,0 chr1 41481778 . T . PASS END=41481799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:13,0 chr1 41481800 . G . PASS END=41481800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 41481801 . A . PASS END=41481801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 41481802 . C . PASS END=41481836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,615:0,41,255:19,0 chr1 41481837 . G . PASS END=41481839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 41481840 . C . PASS END=41481845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:19,0 chr1 41481846 . C . PASS END=41481856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 41481857 . G . PASS END=41481900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,629:0,44,255:19,0 chr1 41482906 . C . PASS END=41483007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1163:0,80,255:40,0 chr1 41483008 . C . PASS END=41483008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1512:0,74,255:40,0 chr1 41483009 . T . PASS END=41483014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:91:45:0,91,1444:0,91,255:40,0 chr1 41483015 . T . PASS END=41483015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1454:0,79,255:38,0 chr1 41483016 . G . PASS END=41483037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1305:0,81,255:40,0 chr1 41483038 . C . PASS END=41483038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:28,0 chr1 41483039 . A . PASS END=41483039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 41483040 . G . PASS END=41483040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1072:0,52,255:27,0 chr1 41483041 . G . PASS END=41483045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1186:0,83,255:29,0 chr1 41483046 . T . PASS END=41483046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 41483047 . C . PASS END=41483047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:26,0 chr1 41483048 . A . PASS END=41483048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 41483049 . C . PASS END=41483049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:26,0 chr1 41483307 . C . PASS END=41483307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr1 41483308 . T . PASS END=41483308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:31,0 chr1 41483309 . T . PASS END=41483437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1075:0,81,255:40,0 chr1 41483438 . G . PASS END=41483438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 41483439 . G . PASS END=41483439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 41483440 . T . PASS END=41483448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 41483449 . C . PASS END=41483451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 41483452 . A . PASS END=41483496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 41483497 . C . PASS END=41483516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 41483517 . G . PASS END=41483557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:24,0 chr1 41483558 . T . PASS END=41483558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 41483559 . G . PASS END=41483565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 41483566 . T . PASS END=41483566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 41483567 . C . PASS END=41483582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 41483583 . G . PASS END=41483585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 41483586 . C . PASS END=41483593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 41483594 . T . PASS END=41483606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 41483607 . G . PASS END=41483618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 41483619 . A . PASS END=41483619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 41483620 . C . PASS END=41483620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 41483621 . C . PASS END=41483628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 41483629 . A . PASS END=41483642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr1 41483643 . C . PASS END=41483643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 41483644 . A . PASS END=41483644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 41483645 . C . PASS END=41483779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,582:0,44,255:19,0 chr1 41483780 . G . PASS END=41483780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr1 41483781 . A . PASS END=41483788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 41483789 . C . PASS END=41483789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:15,0 chr1 41483790 . A . PASS END=41483796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:16,0 chr1 41483797 . A . PASS END=41483797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 41483798 . G . PASS END=41483804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 41483805 . G . LowGQ END=41483809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:17:0,0,494:15,0,255:16,3 chr1 41483810 . C . PASS END=41483812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 41483813 . C . PASS END=41483813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 41483814 . C . PASS END=41483823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 41483824 . T . PASS END=41483828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 41485898 . C . PASS END=41485899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 41485900 . C . PASS END=41485901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 41485902 . C G, 103.23 PASS DP=22;MQ=250.00;MQRankSum=1.576;ReadPosRankSum=0.158;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,21,0:0.955,0.000:22:0,11,0:1,10,0:53:141,56,0,785,63,792:255,50,0:1,0:1.0323e+02,5.3228e+01,2.0709e-05,4.5000e+02,9.4968e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,14,7:0,1,14,7 chr1 41485903 . T . PASS END=41485930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:26,0 chr1 41485931 . C . PASS END=41485931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 41485932 . A . PASS END=41485933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 41485934 . T . PASS END=41485936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 41485937 . C . PASS END=41485937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 41485938 . A . PASS END=41485939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 41485940 . G . PASS END=41485940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr1 41485941 . T . PASS END=41485941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1055:0,41,255:30,0 chr1 41485942 . C . PASS END=41485948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 41485949 . A . PASS END=41485949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1086:0,49,255:30,0 chr1 41485950 . C . PASS END=41485953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 41485954 . C . PASS END=41485954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 41485955 . T . PASS END=41485971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1202:0,83,255:30,0 chr1 41485972 . T . PASS END=41485972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 41485973 . T . PASS END=41485973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 41485974 . A . PASS END=41485975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 41485976 . G . PASS END=41485979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 41485980 . T . PASS END=41485980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 41485981 . C . PASS END=41485981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 41485982 . C . PASS END=41485982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 41485983 . T . PASS END=41485986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 41485987 . G . PASS END=41486005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 41486006 . G . PASS END=41486006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 41486007 . G . PASS END=41486015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 41486016 . G . PASS END=41486021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 41486022 . G . PASS END=41486022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 41486023 . T . PASS END=41486024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1086:0,84,255:28,0 chr1 41486025 . T . PASS END=41486049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,71,255:26,0 chr1 41486050 . G . PASS END=41486070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1102:0,80,255:29,0 chr1 41486071 . G . PASS END=41486071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 41486072 . C . PASS END=41486077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 41486078 . C . PASS END=41486078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 41486079 . A . PASS END=41486092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1147:0,90,255:31,0 chr1 41486093 . C . PASS END=41486093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 41486094 . C . PASS END=41486171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1188:0,83,255:36,0 chr1 41486172 . A . PASS END=41486172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1237:0,75,255:33,0 chr1 41486173 . G . PASS END=41486174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,99,1485:0,108,255:35,0 chr1 41486175 . T . PASS END=41486175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr1 41486176 . G . PASS END=41486207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1350:0,84,255:40,0 chr1 41486208 . T . PASS END=41486244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,113,1596:0,113,255:40,0 chr1 41486245 . C T, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=4.567;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,25,0:0.581,0.000:43:7,10,0:11,15,0:46:85,0,46,185,185,185:255,0,255:17,0:5.0000e+01,1.0380e-04,4.8571e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,8,12,13:9,9,13,12 chr1 41486246 . G . PASS END=41486282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,102,1544:0,102,255:40,0 chr1 41486283 . A . PASS END=41486317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,90,255:37,0 chr1 41486318 . C . PASS END=41486332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:27:0,65,969:0,65,255:26,0 chr1 41493866 . T . PASS END=41493871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 41493872 . C . PASS END=41493877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 41493878 . C . PASS END=41493878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 41493879 . T . PASS END=41493988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:30:0,81,1191:0,81,255:40,0 chr1 41493989 . C . PASS END=41493991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,85,255:24,0 chr1 41494256 . G . PASS END=41494259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,623:0,54,255:18,0 chr1 41494260 . T . PASS END=41494269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,601:0,54,255:19,0 chr1 41494270 . G . PASS END=41494320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:26,0 chr1 41494321 . C . PASS END=41494414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1122:0,87,255:37,0 chr1 41494415 . C . PASS END=41494417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 41499655 . C . PASS END=41499688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,137,255:40,0 chr1 41499689 . A . PASS END=41499689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,6:68:76:68:0,76,1981:0,76,255:40,0 chr1 41499690 . T . PASS END=41499720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,137,255:40,0 chr1 41503034 . C . PASS END=41503160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:32:0,90,1350:0,96,255:40,0 chr1 41503161 . T . PASS END=41503161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1844:0,71,255:40,0 chr1 41503162 . G . PASS END=41503189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:39:0,81,1215:0,82,255:40,0 chr1 41503190 . T . PASS END=41503193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,88,255:25,0 chr1 41503194 . C . LowGQ END=41503194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:35:0,0,853:17,0,255:20,0 chr1 41503195 . C . PASS END=41503198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,82,255:25,0 chr1 41503199 . G . PASS END=41503199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,901:0,54,255:22,0 chr1 41503200 . G . PASS END=41503200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 41503201 . A . PASS END=41503201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 41503202 . C . PASS END=41503203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 41503204 . A . PASS END=41503205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:26,0 chr1 41503206 . G . PASS END=41503206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:12:30:0,12,836:0,12,255:26,0 chr1 41503207 . G . PASS END=41503210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1062:0,74,255:26,0 chr1 41503211 . C . PASS END=41503211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,901:0,40,255:24,0 chr1 41503212 . A . PASS END=41503212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,917:0,10,255:24,0 chr1 41503213 . C . PASS END=41503213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:23,0 chr1 41507153 . T . PASS END=41507157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1474:0,111,255:39,0 chr1 41507158 . T . PASS END=41507180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,117,1415:0,117,255:40,0 chr1 41507181 . G . PASS END=41507181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1277:0,79,255:37,0 chr1 41507182 . C . PASS END=41507237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:33:0,89,1249:0,89,255:40,0 chr1 41512079 . C . PASS END=41512267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:96:36:0,96,1413:0,101,255:40,0 chr1 41512268 . C . PASS END=41512270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:35:0,69,1035:0,89,255:25,0 chr1 41514362 . C . PASS END=41514364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 41514365 . A . PASS END=41514365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 41514366 . G . PASS END=41514370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,607:0,41,255:19,0 chr1 41514371 . C . PASS END=41514372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr1 41514373 . T . PASS END=41514373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 41514374 . C . PASS END=41514382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 41514383 . G . PASS END=41514458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,964:0,81,255:35,0 chr1 41514459 . C . PASS END=41514459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:31,0 chr1 41514460 . A . PASS END=41514525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1215:0,90,255:36,0 chr1 41514526 . G . PASS END=41514558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,817:0,65,255:26,0 chr1 41514559 . C . PASS END=41514559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 41514560 . A . PASS END=41514562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 41536267 . C . PASS END=41536393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:35:0,105,1333:0,105,255:40,0 chr1 41540891 . C . PASS END=41540892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 41540893 . T . PASS END=41540893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 41540894 . G . PASS END=41540900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 41540901 . G . PASS END=41540938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1072:0,85,255:34,0 chr1 41540939 . A . PASS END=41540939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr1 41540940 . G . PASS END=41541096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:35:0,90,1350:0,98,255:40,0 chr1 41541097 . C . PASS END=41541108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:29:0,69,1035:0,87,255:26,0 chr1 41541109 . T . PASS END=41541113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41541114 . G . PASS END=41541114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 41541115 . G . PASS END=41541116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 41541117 . A . PASS END=41541117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 41541118 . T . PASS END=41541119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 41541120 . A . PASS END=41541120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 41541121 . C . PASS END=41541121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 41541122 . A . PASS END=41541122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 41541123 . A . PASS END=41541123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 41578955 . C . PASS END=41578956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 41578957 . T . PASS END=41578957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr1 41578958 . T . PASS END=41578979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,886:0,72,255:26,0 chr1 41578980 . G . PASS END=41578982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 41578983 . T . PASS END=41578983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 41578984 . C . PASS END=41578988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 41578989 . C . PASS END=41578989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 41578990 . A . PASS END=41578990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 41578991 . A . PASS END=41578992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 41578993 . G . PASS END=41578996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 41578997 . A . PASS END=41578997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:31,0 chr1 41578998 . C . PASS END=41579002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:32,0 chr1 41579003 . C . PASS END=41579003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:31,0 chr1 41579004 . C . PASS END=41579073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1305:0,92,255:40,0 chr1 41579074 . A . PASS END=41579074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,92,255:25,0 chr1 41579075 . C . PASS END=41579075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 41579076 . A . PASS END=41579077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 41579078 . G . PASS END=41579088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:31,0 chr1 41579089 . C . PASS END=41579089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 41579090 . C . PASS END=41579090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 41579091 . C . PASS END=41579091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 41579092 . C . PASS END=41579094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 41579095 . A . PASS END=41579095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 41579096 . C . PASS END=41579112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:31,0 chr1 41579113 . G . PASS END=41579113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1078:0,44,255:30,0 chr1 41579114 . G . PASS END=41579139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:31,0 chr1 41579140 . T . PASS END=41579140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 41579141 . C . PASS END=41579142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 41579143 . A . PASS END=41579160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,71,255:26,0 chr1 41579161 . C . PASS END=41579170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 41579171 . A . PASS END=41579188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr1 41579189 . A . PASS END=41579198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 41582594 . C . PASS END=41582605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1124:0,80,255:35,0 chr1 41582606 . C . PASS END=41582606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 41582607 . C . PASS END=41582682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:32:0,93,1140:0,94,255:39,0 chr1 41608546 . T . PASS END=41608774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:40:0,90,1425:0,90,255:40,0 chr1 41608775 . G . PASS END=41608784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:34:0,60,900:0,89,255:21,0 chr1 41617286 . C . PASS END=41617356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:66:0,120,1800:0,169,255:40,0 chr1 41618271 . C . PASS END=41618346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,106,1743:0,106,255:40,0 chr1 41625397 . C . PASS END=41625402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:81:0,120,1800:0,243,255:40,0 chr1 41626547 . C . PASS END=41626570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:88:0,120,1800:0,248,255:40,0 chr1 41627036 . C . PASS END=41627104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,112,1709:0,112,255:40,0 chr1 41651793 . C . PASS END=41651805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,203,255:40,0 chr1 41827603 . A . PASS END=41827613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 41827614 . G . PASS END=41827614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 41827615 . C . PASS END=41827623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 41827624 . C . PASS END=41827629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 41827630 . G . PASS END=41827630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:6,0 chr1 41827631 . T . PASS END=41827636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 41827637 . T . LowGQ END=41827637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:7,0 chr1 41827638 . G . PASS END=41827648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,272:0,24,255:8,0 chr1 41827649 . T . LowGQ END=41827649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,202:15,0,217:7,0 chr1 41827650 . C . PASS END=41827660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:8,0 chr1 41827661 . G . PASS END=41827661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 41827662 . C . PASS END=41827669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 41827670 . G . PASS END=41827670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 41827671 . C . PASS END=41827671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 41827672 . T . PASS END=41827672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 41827673 . C . PASS END=41827683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 41827684 . C . PASS END=41827696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 41827697 . C . PASS END=41827697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 41827698 . T . PASS END=41827707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 41827708 . G . PASS END=41827708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 41827709 . G . PASS END=41827713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 41827714 . G . PASS END=41827714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 41827715 . A . PASS END=41827719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 41827720 . G . PASS END=41827720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 41827721 . G . PASS END=41827723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 41827724 . C . PASS END=41827724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 41827725 . G . PASS END=41827732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 41827733 . C . PASS END=41827733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 41827734 . A . PASS END=41827753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,435:0,33,255:12,0 chr1 41827754 . A . PASS END=41827755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 41827756 . G . PASS END=41827766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 41827767 . G . LowGQ END=41827767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,266:9,0,255:7,0 chr1 41827768 . G . PASS END=41827770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 41827771 . C . PASS END=41827771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 41827772 . G . PASS END=41827772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 41827773 . C . PASS END=41827773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 41827774 . C . PASS END=41827779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 41827780 . A . PASS END=41827782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 41827783 . G . PASS END=41827789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 41827790 . C T, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=-0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:4,1,0:3,0,0:20:15,0,50,36,250,286:15,0,247:6,0:4.2461e-02,2.0120e+01,7.3120e+01,5.5880e+01,3.0483e+02,3.0882e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,1,0:4,3,1,0 chr1 41827791 . G . PASS END=41827805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,288:0,24,255:9,0 chr1 41827806 . G . PASS END=41827806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 41827807 . C . PASS END=41827815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 41827816 . G . PASS END=41827820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 41827821 . G . PASS END=41827826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 41827827 . A . PASS END=41827827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 41827828 . C . PASS END=41827838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 41827839 . A . PASS END=41827859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr1 41827860 . C . PASS END=41827860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 41827861 . G . PASS END=41827871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 41827872 . C . PASS END=41827873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 41827874 . T . PASS END=41827874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 41827875 . G . PASS END=41827885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:12,0 chr1 41827886 . A . PASS END=41827908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr1 41827909 . A . PASS END=41827909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,519:0,34,255:16,0 chr1 41827910 . G . PASS END=41827943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:17,0 chr1 41827944 . C . PASS END=41827955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 41827956 . G . PASS END=41827960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 41827961 . G . PASS END=41827965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 41827966 . G . PASS END=41827976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 41827977 . C . PASS END=41827984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41827985 . A . PASS END=41827985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 41827986 . A . PASS END=41827994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 41827995 . C . PASS END=41828006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 41828007 . C . PASS END=41828011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41828012 . G . PASS END=41828012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 41828013 . G . PASS END=41828014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41828015 . A . PASS END=41828015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:10,0 chr1 41828016 . G . PASS END=41828016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 41847288 . A . PASS END=41847288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,497:0,45,255:15,0 chr1 41847289 . A . PASS END=41847289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 41847290 . C . PASS END=41847290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 41847291 . T . PASS END=41847291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 41847292 . C . PASS END=41847294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 41847295 . T . PASS END=41847296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 41847297 . C . PASS END=41847299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:17,0 chr1 41847300 . C . PASS END=41847300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 41847301 . A . PASS END=41847314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,607:0,40,255:19,0 chr1 41847315 . C . PASS END=41847322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,662:0,60,255:22,0 chr1 41847323 . T . PASS END=41847323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:20,0 chr1 41847324 . T . PASS END=41847324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 41847325 . T . PASS END=41847326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 41847327 . A . PASS END=41847327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 41847328 . T . PASS END=41847328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 41847329 . C . PASS END=41847329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 41847330 . C . PASS END=41847332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 41847333 . G . PASS END=41847333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr1 41847334 . T . PASS END=41847334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:17,0 chr1 41847335 . G . PASS END=41847341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,738:0,52,255:19,0 chr1 41847342 . G . PASS END=41847349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:22,0 chr1 41847350 . C . PASS END=41847350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 41847351 . G . PASS END=41847358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 41847359 . T . PASS END=41847359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,642:0,49,255:20,0 chr1 41847360 . T . PASS END=41847360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:20,0 chr1 41847361 . C . PASS END=41847380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr1 41847381 . G . PASS END=41847381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 41847382 . A . PASS END=41847383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 41847384 . G . PASS END=41847401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,49,255:19,0 chr1 41847402 . A . PASS END=41847405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 41847406 . C . PASS END=41847409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 41847410 . G . PASS END=41847412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 41847413 . C . PASS END=41847413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 41847414 . A . PASS END=41847442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,764:0,63,255:23,0 chr1 41847443 . G . PASS END=41847445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 41847446 . C . PASS END=41847456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 41847457 . A . PASS END=41847465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 41847466 . C . PASS END=41847470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 41847471 . A . PASS END=41847471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 41847472 . A . PASS END=41847476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 41847477 . A . PASS END=41847557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,553:0,41,255:19,0 chr1 41847558 . A . PASS END=41847558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 41847559 . A . PASS END=41847565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 41847566 . C . PASS END=41847566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr1 41847567 . G . PASS END=41847569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 41847570 . A . PASS END=41847594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,488:0,39,255:13,0 chr1 41847595 . A . PASS END=41847603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 41847604 . C . PASS END=41847604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 41847605 . T . PASS END=41847618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 41847619 . G . PASS END=41847619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 41847620 . C . PASS END=41847639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 41847640 . T . PASS END=41847651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 41847652 . C . PASS END=41847652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 41847653 . C . PASS END=41847671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 41847672 . G . PASS END=41847691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,521:0,42,255:15,0 chr1 41847692 . A . PASS END=41847692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 41847693 . T . PASS END=41847694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 41847695 . A . PASS END=41847695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 41847696 . T . PASS END=41847706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,596:0,48,255:16,0 chr1 41847707 . G . PASS END=41847734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 41847735 . C . PASS END=41847738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 41847739 . C . PASS END=41847744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 41847745 . G . PASS END=41847745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 41847746 . C . PASS END=41847759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 41847760 . G . PASS END=41847795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 41847796 . T . PASS END=41847824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 41847825 . C . LowGQ END=41847993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 41847994 . G . PASS END=41848006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 41848007 . C . PASS END=41848007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 41848008 . C . PASS END=41848028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 41848029 . C . PASS END=41848113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,55:3,0 chr1 41848114 . C . PASS END=41848123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 41848124 . C . PASS END=41848134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 41848135 . G . LowGQ END=41848135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:6,0 chr1 41848136 . C . PASS END=41848169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 41848170 . C . PASS END=41848184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 41848185 . G . PASS END=41848194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 41848195 . A . PASS END=41848195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 41848196 . T . PASS END=41848200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,545:0,45,255:16,0 chr1 41848201 . A . PASS END=41848202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 41848203 . C . PASS END=41848237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 41848238 . T . PASS END=41848238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 41848239 . C . PASS END=41848244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 41848245 . C . PASS END=41848245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 41848246 . T . LowGQ END=41848246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,435:7,0,255:13,0 chr1 41848247 . T . PASS END=41848253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 41848254 . C . PASS END=41848267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 41848268 . A . PASS END=41848268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 41848269 . C . PASS END=41848269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 41848270 . T . PASS END=41848270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:11,0 chr1 41848271 . T . PASS END=41848277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 41848278 . C . PASS END=41848278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:11,0 chr1 41848279 . G . PASS END=41848279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 41848280 . A . PASS END=41848283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 41848284 . G . PASS END=41848284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 41848285 . G . PASS END=41848285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 41848286 . C . PASS END=41848287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41848288 . C . PASS END=41848288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,416:0,9,255:11,0 chr1 41848289 . T . PASS END=41848289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 41848290 . G . PASS END=41848290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41848291 . C . PASS END=41848292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 41848293 . T . PASS END=41848293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 41848294 . C . PASS END=41848294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 41848295 . C . PASS END=41848302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 41848303 . C . PASS END=41848303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 41848304 . C . PASS END=41848306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 41848307 . G . PASS END=41848307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 41848308 . C . PASS END=41848320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 41848321 . C . PASS END=41848326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 41848327 . C . PASS END=41848327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:18:13:0,18,270:0,39,255:6,0 chr1 41848328 . C . PASS END=41848353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,22,255:9,0 chr1 41945080 . C . PASS END=41945173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,105,1499:0,105,255:40,0 chr1 41946766 . C . PASS END=41946864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:33:0,85,1195:0,85,255:40,0 chr1 41948137 . C . PASS END=41948140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 41948141 . G . PASS END=41948151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 41948152 . C . PASS END=41948152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 41948153 . A . PASS END=41948153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 41948154 . G . PASS END=41948155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 41948156 . A . PASS END=41948161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 41948162 . C . PASS END=41948162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:27,0 chr1 41948163 . A . PASS END=41948169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 41948170 . G . PASS END=41948170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr1 41948171 . G . PASS END=41948188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 41948189 . A . PASS END=41948201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 41948202 . T . PASS END=41948202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 41948203 . G . PASS END=41948206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 41948207 . G . PASS END=41948208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:24:0,57,855:0,72,255:19,0 chr1 41948209 . G . PASS END=41948237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr1 41948238 . C . PASS END=41948250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr1 41948251 . G . PASS END=41948259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 41949718 . T . PASS END=41949730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 41949731 . C . PASS END=41949744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 41949745 . A . PASS END=41949745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:14,0 chr1 41949746 . A . PASS END=41949751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 41949752 . A . PASS END=41949752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 41949753 . G . PASS END=41949764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:16,0 chr1 41949765 . C . PASS END=41949765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 41949766 . T . PASS END=41949786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:18,0 chr1 41949787 . C . PASS END=41949787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 41949788 . A . PASS END=41949795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:19,0 chr1 41949796 . C . PASS END=41949808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 41949809 . G . PASS END=41949812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:18,0 chr1 41949813 . G . PASS END=41949813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 41949814 . G . PASS END=41949822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,630:0,41,255:18,0 chr1 41949823 . G . PASS END=41949823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:14,0 chr1 41949824 . C . PASS END=41949824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:15,0 chr1 41949825 . A . PASS END=41949825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:15,0 chr1 41949826 . T . PASS END=41949826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,658:0,21,255:15,0 chr1 41949827 . G . PASS END=41949827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:15,0 chr1 41949828 . A . PASS END=41949828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:15,0 chr1 41949829 . G . PASS END=41949829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 41949830 . A . PASS END=41949830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,582:0,5,255:14,0 chr1 41949831 . T . PASS END=41949833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 41949834 . G . PASS END=41949834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 41949835 . G . PASS END=41949851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 41949852 . G . PASS END=41949852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 41949853 . G . PASS END=41949853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 41949854 . T . PASS END=41949854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 41949855 . G . PASS END=41949855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 41949856 . G . PASS END=41949856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 41949857 . C . PASS END=41949858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 41949859 . G . PASS END=41949874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,495:0,31,255:12,0 chr1 41950209 . C . PASS END=41950249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:37:0,95,1379:0,95,255:40,0 chr1 41950250 . C . PASS END=41950286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,141,255:40,0 chr1 41950287 . G A, 50.00 PASS DP=54;MQ=249.71;MQRankSum=6.297;ReadPosRankSum=0.432;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,27,0:0.500,0.000:54:9,15,0:18,12,0:48:85,0,50,966,957,1923:255,0,255:25,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,15,12:17,10,11,16 chr1 41950288 . C . PASS END=41950311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,146,255:40,0 chr1 41950312 . T C, 194.01 PASS DP=49;MQ=249.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,21,0:0,28,0:144:232,147,0,1854,147,1854:255,147,0:0,0:1.9401e+02,1.4401e+02,0.0000e+00,4.5000e+02,1.7878e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,28:0,0,27,22 chr1 41950313 . G . PASS END=41950349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,100,1283:0,100,255:40,0 chr1 41950350 . A . PASS END=41950356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:35,0 chr1 41976122 . C . PASS END=41976153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:9,0 chr1 41976154 . G . PASS END=41976154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 41976155 . A . PASS END=41976155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 41976156 . T . PASS END=41976164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 41976165 . G . PASS END=41976169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 41976170 . G . PASS END=41976173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41976174 . T . PASS END=41976174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 41976175 . C . PASS END=41976179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 41976180 . C . PASS END=41976180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 41976181 . T . PASS END=41976186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 41976187 . A . PASS END=41976188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41976189 . G . PASS END=41976193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 41976194 . G . PASS END=41976194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 41976195 . G . PASS END=41976215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 41976216 . G . PASS END=41976216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 41976217 . G . PASS END=41976223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 41976224 . G . PASS END=41976225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:15,0 chr1 41976226 . A . PASS END=41976227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 41976228 . A . PASS END=41976228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:15,0 chr1 41976229 . G . PASS END=41976229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 41976230 . G . PASS END=41976230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 41976231 . T . PASS END=41976234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 41976235 . T . PASS END=41976235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 41976236 . C . PASS END=41976239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 41976240 . C . PASS END=41976240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 41976241 . G . PASS END=41976241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 41976242 . G . PASS END=41976242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 41976243 . G . PASS END=41976245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 41976246 . G . PASS END=41976246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 41976247 . G . PASS END=41976247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 41976248 . G . PASS END=41976257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 41976258 . G . PASS END=41976258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 41976259 . A . PASS END=41976278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,483:0,45,255:17,0 chr1 41976279 . A . PASS END=41976279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 41976280 . C . PASS END=41976280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 41976281 . A . PASS END=41976287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,521:0,34,255:13,0 chr1 41976288 . C . PASS END=41976288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 41976289 . T . PASS END=41976290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 41976291 . C . PASS END=41976292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 41976293 . G . PASS END=41976293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 41976294 . T . PASS END=41976313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 41976314 . A . PASS END=41976327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 41976328 . T C, 77.11 PASS DP=10;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,5,0:0,5,0:27:115,30,0,386,30,386:255,30,0:0,0:7.7105e+01,2.7105e+01,8.4686e-03,3.8316e+02,6.1875e+01,3.8616e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,5:0,0,2,8 chr1 41976329 . C . PASS END=41976365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 41976366 . T . PASS END=41976372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 41976373 . C . LowGQ END=41976373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:7,0,247:7,0 chr1 41976374 . C . PASS END=41976377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 41976378 . C . PASS END=41976378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 41976379 . G . PASS END=41976385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 41976386 . G . PASS END=41976386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 41976387 . G . PASS END=41976388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 41976389 . C . PASS END=41976389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 41976390 . G . PASS END=41976405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 41976406 . C . LowGQ END=41976407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:0,0,233:7,0 chr1 41976408 . G . PASS END=41976409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 41976410 . T . PASS END=41976410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 41976411 . G . PASS END=41976417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 41976418 . A . PASS END=41976418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 41976419 . G . PASS END=41976422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 41976423 . C . PASS END=41976423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 41976424 . T . PASS END=41976431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 41976432 . G . PASS END=41976450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 41976451 . C . LowGQ END=41976451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr1 41976452 . C . PASS END=41976457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr1 41976458 . C . PASS END=41976463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 41976464 . G . PASS END=41976464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 41976465 . G . PASS END=41976466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 41976467 . T . PASS END=41976467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr1 41976468 . G . PASS END=41976470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 41976471 . C . PASS END=41976471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 41976472 . A . PASS END=41976477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:16,0 chr1 41976478 . G . PASS END=41976478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 41976479 . A . PASS END=41976480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 41976481 . G . PASS END=41976481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 41976482 . C . PASS END=41976496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,653:0,48,255:18,0 chr1 41976497 . G . PASS END=41976497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 41976498 . C . PASS END=41976506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr1 41976507 . T . PASS END=41976507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 41976508 . C . PASS END=41976518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:19,0 chr1 41976519 . G . PASS END=41976521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 41976522 . T . PASS END=41976522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 41976523 . A . PASS END=41976528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 41976529 . C . PASS END=41976529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 41976530 . G . PASS END=41976537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 41976538 . G . PASS END=41976538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 41976539 . C . PASS END=41976539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 41976540 . T . PASS END=41976541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 41976542 . T . PASS END=41976543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 41976544 . A . PASS END=41976547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr1 41976548 . G . PASS END=41976562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr1 41976563 . G . PASS END=41976564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 41976565 . C . PASS END=41976586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:26,0 chr1 41976587 . G . PASS END=41976590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 41976591 . G . PASS END=41976591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 41976592 . A . PASS END=41976594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr1 41976595 . A . PASS END=41976615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,884:0,61,255:26,0 chr1 41976616 . G . PASS END=41976616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,910:0,50,255:24,0 chr1 41976617 . G . PASS END=41976632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,908:0,61,255:25,0 chr1 41976633 . T . PASS END=41976633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 41976634 . C . PASS END=41976641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 41976642 . C . PASS END=41976642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr1 41976643 . C . PASS END=41976644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 41976645 . G . PASS END=41976647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 41976648 . A . PASS END=41976667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 41976668 . G . PASS END=41976668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr1 41976669 . A . PASS END=41976750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,62,255:26,0 chr1 41976751 . C . PASS END=41976753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41976754 . T . PASS END=41976758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:26,0 chr1 41976759 . A . PASS END=41976759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,870:0,37,255:24,0 chr1 41976760 . T . PASS END=41976760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 41976761 . C . PASS END=41976761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41976762 . A . PASS END=41976762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 41976763 . A . PASS END=41976763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr1 41976764 . G . PASS END=41976778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr1 41976779 . G . PASS END=41976781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 41976782 . C . PASS END=41976800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,898:0,62,255:26,0 chr1 41976801 . G . PASS END=41976801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 41976802 . G . PASS END=41976819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 41976820 . T . PASS END=41976820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 41976821 . C . PASS END=41976847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,923:0,69,255:25,0 chr1 41976848 . G . PASS END=41976848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 41976849 . T . PASS END=41976854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 41976855 . T . PASS END=41976856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 41976857 . A . PASS END=41976857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 41976858 . T . PASS END=41976858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 41976859 . G . PASS END=41976904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 41976905 . T . PASS END=41976905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 41976906 . G . PASS END=41976907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 41976908 . G . PASS END=41976908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 41976909 . C . PASS END=41976912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 41976913 . A . PASS END=41976937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,629:0,54,255:18,0 chr1 41978487 . C . PASS END=41978496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 41978497 . G . PASS END=41978514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr1 41978515 . C . PASS END=41978525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr1 41978526 . C . PASS END=41978526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 41978527 . T . PASS END=41978528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,0 chr1 41978529 . G . PASS END=41978537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 41978538 . A . PASS END=41978538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 41978539 . G . PASS END=41978550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 41978551 . A . PASS END=41978563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 41978564 . G . PASS END=41978565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 41978566 . T G, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,11,0:0,10,0:60:148,63,0,812,63,812:255,63,0:0,0:1.1020e+02,6.0204e+01,4.1418e-06,4.5000e+02,9.4974e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,7:0,0,6,15 chr1 41978567 . C . PASS END=41978603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,817:0,63,255:25,0 chr1 41978604 . G . PASS END=41978663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,847:0,69,255:25,0 chr1 41978664 . C . PASS END=41978664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 41978665 . T . PASS END=41978674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 41978675 . A . PASS END=41978675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 41978676 . C . PASS END=41978690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 41978691 . C . PASS END=41978692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 41978693 . A . PASS END=41978694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 41978695 . T . PASS END=41978695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41978696 . A . PASS END=41978697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,960:0,68,255:26,0 chr1 41978698 . C . PASS END=41978702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 41978703 . G . PASS END=41978704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 41978705 . G . PASS END=41978710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 41978711 . G . PASS END=41978711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 41978712 . G . PASS END=41978712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 41978713 . T . PASS END=41978713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 41978714 . C . PASS END=41978714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 41978715 . G . PASS END=41978716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 41978717 . T . PASS END=41978725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1156:0,83,255:29,0 chr1 41978726 . C . PASS END=41978726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:24,0 chr1 41978727 . G . PASS END=41978727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 41978728 . A . PASS END=41978729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 41978730 . T . PASS END=41978730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1023:0,63,255:26,0 chr1 41978731 . T . PASS END=41978737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,83,255:30,0 chr1 41978738 . G . PASS END=41978738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:28,0 chr1 41978739 . C . PASS END=41978760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:32,0 chr1 41978761 . T . PASS END=41978761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,993:0,66,255:30,0 chr1 41978762 . C . PASS END=41978787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1087:0,82,255:33,0 chr1 41978788 . G . PASS END=41978800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 41978801 . G . PASS END=41978824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:25,0 chr1 41978825 . C G, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,932,75,932:255,75,0:0,0:1.2178e+02,7.1783e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,10:0,0,18,7 chr1 41978826 . G . PASS END=41978834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 41978835 . C . PASS END=41978843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 41978844 . G . PASS END=41978847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 41978848 . A . PASS END=41978862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,52,255:19,0 chr1 41978863 . G . PASS END=41978878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:18,0 chr1 41978879 . C . PASS END=41978879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 41978880 . C . PASS END=41978900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr1 41978901 . G . PASS END=41978901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:14,0 chr1 41978902 . C . PASS END=41978914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:18,0 chr1 41978915 . A . PASS END=41978915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr1 41978916 . T . PASS END=41978923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,516:0,54,255:18,0 chr1 41978924 . T . PASS END=41978924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 41978925 . T . PASS END=41978927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 41978928 . G . PASS END=41978928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 41978929 . G . PASS END=41978932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 41978933 . G . PASS END=41978933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 41978934 . C . PASS END=41978935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,644:0,54,255:18,0 chr1 41978936 . A . PASS END=41978936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 41978937 . G . PASS END=41978942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:53:18:0,53,473:0,53,255:18,0 chr1 41978943 . G . PASS END=41978943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:16,0 chr1 41978944 . C . PASS END=41978947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 41978948 . C . PASS END=41978948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,604:0,10,255:15,0 chr1 41978949 . T . PASS END=41978949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 41978950 . A . PASS END=41978950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 41978951 . G . PASS END=41978951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:12,0 chr1 41978952 . T . PASS END=41978954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 41978955 . T . PASS END=41978955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:12,0 chr1 41978956 . G . PASS END=41978956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 41978957 . G . PASS END=41978957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 41978958 . A . PASS END=41978958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:13,0 chr1 41978959 . C . PASS END=41978959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 41978960 . G . LowGQ END=41978960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,412:35,0,255:13,0 chr1 41978961 . G . PASS END=41978961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 41978962 . C . PASS END=41978962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 41978963 . T . PASS END=41978964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 41978965 . C . PASS END=41978965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 41978966 . C . PASS END=41978966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 41978967 . T . PASS END=41978967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 41978968 . G . PASS END=41978968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 41978969 . C . PASS END=41978969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 41978970 . T . PASS END=41978971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 41978972 . C . PASS END=41978972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 41978973 . T . PASS END=41978975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 41978976 . G . PASS END=41978976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr1 41978977 . C . PASS END=41978988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 41978989 . G . PASS END=41978990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 41978991 . T . PASS END=41978991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 41978992 . C . PASS END=41978992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 41978993 . T . PASS END=41978994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 41978995 . C . PASS END=41978996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 41978997 . T . PASS END=41978998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,576:0,21,255:14,0 chr1 41978999 . G . PASS END=41979001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 41979002 . A . PASS END=41979002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:14,0 chr1 41979003 . C . PASS END=41979004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 41979005 . C . PASS END=41979005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,471:0,1,255:12,0 chr1 41979006 . A . PASS END=41979010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 41979011 . T . PASS END=41979012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 41979013 . T . PASS END=41979013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 41979014 . A . PASS END=41979014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 41979015 . G . PASS END=41979018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 41979019 . A . PASS END=41979020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 41979021 . G . PASS END=41979021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr1 41979022 . G . PASS END=41979044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,481:0,45,255:15,0 chr1 41979045 . A . PASS END=41979053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 41979054 . A . PASS END=41979056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 41979057 . G . PASS END=41979061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 41979062 . G . PASS END=41979081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 41979082 . G . PASS END=41979082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 41979083 . G . PASS END=41979084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 41979085 . A . PASS END=41979086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 41979087 . G . PASS END=41979096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,545:0,45,255:18,0 chr1 41979097 . G . PASS END=41979097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 41979098 . A . PASS END=41979103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 41979104 . A . PASS END=41979104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:17,0 chr1 41979105 . G . PASS END=41979107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,737:0,57,255:19,0 chr1 41979108 . G . PASS END=41979110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 41979111 . G . PASS END=41979118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 41979119 . T . PASS END=41979138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr1 41979139 . A . PASS END=41979139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,605:0,18,255:18,0 chr1 41979140 . C . PASS END=41979143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 41979144 . G . PASS END=41979144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 41979145 . C . PASS END=41979155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,720:0,44,255:17,0 chr1 41979156 . A G, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=1.511;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:3,7,0:6,3,0:48:85,0,50,349,319,669:255,0,255:8,0:5.0000e+01,6.5751e-05,5.2887e+01,3.4927e+02,3.5410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,5,5:5,4,4,6 chr1 41979157 . G . PASS END=41979169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,621:0,40,255:17,0 chr1 41979170 . A . PASS END=41979170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:13,0 chr1 41979171 . G . PASS END=41979193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,515:0,48,255:18,0 chr1 41979194 . G . PASS END=41979203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:17,0 chr1 41979204 . G . PASS END=41979204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 41979205 . G . PASS END=41979221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,660:0,41,255:19,0 chr1 41979222 . C . PASS END=41979228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 41979229 . T . PASS END=41979229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:21,0 chr1 41979230 . G . PASS END=41979244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 41979245 . G . PASS END=41979245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 41979246 . G . PASS END=41979249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 41979250 . G . PASS END=41979250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 41979251 . C . PASS END=41979281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 41979282 . G . PASS END=41979284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 41979285 . C . PASS END=41979294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr1 41979295 . T . PASS END=41979327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 41979328 . G . PASS END=41979328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr1 41979329 . A . PASS END=41979341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 41979342 . C . PASS END=41979357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:26:0,74,955:0,74,255:26,0 chr1 41979358 . T . PASS END=41979359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 41979360 . C . PASS END=41979381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 41979382 . T . PASS END=41979382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:22,0 chr1 41979383 . C . PASS END=41979401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 41979402 . G . PASS END=41979421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 41984073 . C . PASS END=41984159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:39:0,82,1465:0,82,255:40,0 chr1 41990406 . C . PASS END=41990407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr1 41990408 . T . PASS END=41990408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,983:0,71,255:28,0 chr1 41990409 . T . PASS END=41990410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 41990411 . G . PASS END=41990411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 41990412 . T . PASS END=41990415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1119:0,90,255:31,0 chr1 41990416 . A . PASS END=41990416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:29,0 chr1 41990417 . A . PASS END=41990417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 41990418 . A . PASS END=41990418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 41990419 . A . PASS END=41990550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:31:0,80,1149:0,80,255:40,0 chr1 41990551 . C . PASS END=41990564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:21:0,63,738:0,63,255:21,0 chr1 41990565 . C . PASS END=41990565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 41990566 . T . PASS END=41990570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 41990571 . T . PASS END=41990581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr1 42003037 . T . PASS END=42003039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 42003040 . G . PASS END=42003042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 42003043 . A . PASS END=42003043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 42003044 . T . PASS END=42003047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 42003048 . A . PASS END=42003048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr1 42003049 . A . PASS END=42003058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,471:0,48,255:16,0 chr1 42003059 . A . PASS END=42003072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,531:0,48,255:18,0 chr1 42003073 . A . PASS END=42003081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:25,0 chr1 42003082 . C . PASS END=42003087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 42003088 . C . PASS END=42003088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 42003089 . T . PASS END=42003089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42003090 . C . PASS END=42003090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 42003091 . T . PASS END=42003097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 42003098 . C . PASS END=42003098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 42003099 . A . PASS END=42003109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr1 42003110 . C . PASS END=42003110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 42003111 . A . PASS END=42003151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:29:0,82,1056:0,82,255:33,0 chr1 42003152 . G . PASS END=42003152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 42003153 . G . PASS END=42003198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 42003199 . C . PASS END=42003217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 42003218 . T . PASS END=42003223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,63,255:19,0 chr1 42003224 . T . PASS END=42003224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 42003225 . G . PASS END=42003233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,592:0,40,255:17,0 chr1 42003234 . A . PASS END=42003234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 42003235 . G . PASS END=42003240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 42003241 . T . PASS END=42003241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 42003242 . G . PASS END=42003247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 42009717 . T . PASS END=42009723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,210,255:40,0 chr1 42022724 . T . PASS END=42022754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,104,1256:0,104,255:40,0 chr1 42022755 . C . PASS END=42022791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,118,1600:0,118,255:40,0 chr1 42022792 . C T, 178.97 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,24,0:0,20,0:129:217,132,0,1660,132,1660:255,132,0:0,0:1.7897e+02,1.2897e+02,0.0000e+00,4.5000e+02,1.6374e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,23:0,0,23,21 chr1 42022793 . T . PASS END=42022814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:40:0,84,1260:0,120,255:40,0 chr1 42022815 . T . PASS END=42022826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:24,0 chr1 42041215 . C . PASS END=42041250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,793:0,69,255:24,0 chr1 42041251 . C . PASS END=42041251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 42041252 . T . PASS END=42041283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,828:0,64,255:26,0 chr1 42041284 . C . PASS END=42041284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,829:0,48,255:22,0 chr1 42041285 . C . PASS END=42041285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,795:0,33,255:22,0 chr1 42041286 . T . PASS END=42041286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 42041287 . C . PASS END=42041287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,798:0,31,255:21,0 chr1 42041288 . T . PASS END=42041288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 42041289 . C . PASS END=42041289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,752:0,31,255:20,0 chr1 42041290 . C . PASS END=42041290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,815:0,48,255:21,0 chr1 42041291 . T . PASS END=42041291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 42041292 . C . PASS END=42041292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:21,0 chr1 42041293 . T . PASS END=42041319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 42041320 . T . PASS END=42041320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:22,0 chr1 42041321 . C . PASS END=42041321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 42041322 . T . PASS END=42041322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 42041323 . T . PASS END=42041323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,718:0,22,255:20,0 chr1 42041324 . T . PASS END=42041339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 42041340 . A . PASS END=42041354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:19:0,42,630:0,50,255:19,0 chr1 42041355 . G . PASS END=42041357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 42041358 . A . PASS END=42041360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr1 42045408 . C . PASS END=42045411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 42045412 . G . PASS END=42045446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:25,0 chr1 42045447 . C . PASS END=42045453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 42045454 . G . PASS END=42045454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 42045455 . C . PASS END=42045466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr1 42045467 . G . PASS END=42045475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 42045476 . C . PASS END=42045476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 42045477 . C . PASS END=42045478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 42045479 . T . PASS END=42045792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1195:0,88,255:40,0 chr1 42045793 . T . PASS END=42045793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:34,0 chr1 42045794 . G . PASS END=42045831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1053:0,85,255:35,0 chr1 42045832 . A . PASS END=42045847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr1 42045848 . G . PASS END=42045849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,741:0,69,255:27,0 chr1 42045850 . T . PASS END=42045860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 42045861 . C . PASS END=42045861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,947:0,57,255:27,0 chr1 42045862 . T . PASS END=42045866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 42045867 . A . PASS END=42045867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:7:29:0,7,828:0,7,255:24,0 chr1 42045868 . T . PASS END=42045868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 42045869 . A . LowGQ END=42045869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,6:29:0:29:0,0,637:57,0,255:22,0 chr1 42045870 . T . PASS END=42045885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr1 42045886 . G . PASS END=42045887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 42045888 . G . PASS END=42045906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:37,0 chr1 42045907 . G . PASS END=42046092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1183:0,86,255:40,0 chr1 42046093 . T . PASS END=42046093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1457:0,79,255:40,0 chr1 42046094 . C . PASS END=42046106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:42:0,82,1397:0,82,255:40,0 chr1 42046107 . C . PASS END=42046107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1399:0,76,255:39,0 chr1 42046108 . T . PASS END=42046108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 42046109 . C . PASS END=42046109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1320:0,79,255:38,0 chr1 42046110 . C . PASS END=42046241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:36:0,81,1260:0,81,255:40,0 chr1 42046242 . G . PASS END=42046242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 42046243 . G . PASS END=42046252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,86,255:28,0 chr1 42046253 . T . PASS END=42046253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:27,0 chr1 42046254 . T . PASS END=42046254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,967:0,32,255:27,0 chr1 42046255 . C . PASS END=42046262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 42046263 . T . PASS END=42046263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:27,0 chr1 42046264 . A . PASS END=42046264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 42046265 . A . PASS END=42046266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:26,0 chr1 42046267 . G . PASS END=42046274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42046275 . C . PASS END=42046276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 42046277 . C . PASS END=42046282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 42046283 . G . PASS END=42046283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 42046284 . G . PASS END=42046347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1114:0,85,255:34,0 chr1 42046348 . T . PASS END=42046348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:31,0 chr1 42046349 . G . PASS END=42046358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1272:0,92,255:32,0 chr1 42046359 . A . PASS END=42046359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:31,0 chr1 42046360 . C . PASS END=42046575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:31:0,81,1215:0,82,255:40,0 chr1 42046576 . G . PASS END=42046577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 42046578 . T . PASS END=42046578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 42046579 . G . PASS END=42046585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1039:0,84,255:28,0 chr1 42046586 . T . PASS END=42046586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 42046587 . G . PASS END=42046591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42046592 . G . PASS END=42046610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:24,0 chr1 42046611 . C . PASS END=42046611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 42046612 . C . PASS END=42046612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 42046613 . G T, 49.91 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=1.061;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:7,7,0:6,5,0:48:85,0,50,429,457,886:255,0,255:14,0:4.9914e+01,6.6010e-05,5.3000e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,5,7:5,8,8,4 chr1 42046614 . G . PASS END=42046615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 42046616 . T . PASS END=42046617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 42046618 . T . PASS END=42046622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,900:0,71,255:26,0 chr1 42046623 . G . PASS END=42046623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 42046624 . C . PASS END=42046632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:61:27:0,61,1125:0,61,255:26,0 chr1 42046633 . G . PASS END=42046640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 42046641 . G . PASS END=42046641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 42046642 . G . PASS END=42046650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:29,0 chr1 42046651 . G . PASS END=42046655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 42046656 . T . PASS END=42046700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr1 42046701 . G . PASS END=42046706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 42046707 . C . PASS END=42046721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,992:0,68,255:26,0 chr1 42046722 . C . PASS END=42046724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 42046725 . A . PASS END=42046728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:27:0,68,992:0,68,255:27,0 chr1 42046729 . G . PASS END=42046729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 42046730 . C . PASS END=42046730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 42046731 . A . PASS END=42046731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 42046732 . A . PASS END=42046732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 42046733 . A . PASS END=42046733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,881:0,70,255:27,0 chr1 42046734 . C . PASS END=42046739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 42046740 . T . PASS END=42046740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 42046741 . T . PASS END=42046745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 42046746 . A . PASS END=42046746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 42046747 . G . PASS END=42046750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 42046751 . G . PASS END=42046751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 42046752 . G . PASS END=42046755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1094:0,90,255:30,0 chr1 42046756 . A . PASS END=42046758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 42046759 . C . PASS END=42046760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 42046761 . A . PASS END=42046763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:26,0 chr1 42046764 . A . PASS END=42046766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 42046767 . C . PASS END=42046770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,73,255:26,0 chr1 42046771 . G . PASS END=42046774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,86,255:29,0 chr1 42046775 . A . PASS END=42046777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 42046778 . A . PASS END=42046778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 42046779 . G . PASS END=42046782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 42046783 . G . PASS END=42046785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:29:0,62,1110:0,62,255:27,0 chr1 42046786 . T . PASS END=42046786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 42046787 . A . PASS END=42046788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 42046789 . G . PASS END=42046790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 42046791 . C . PASS END=42046791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 42046792 . A . PASS END=42046801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 42046802 . A . PASS END=42046802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 42046803 . G . PASS END=42046803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:28,0 chr1 42046804 . G . PASS END=42046809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1007:0,87,255:30,0 chr1 42046810 . G . PASS END=42046810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:28,0 chr1 42046811 . G . PASS END=42046811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 42046812 . C T, 134.27 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:84:172,87,0,272,272,272:255,90,0:0,0:1.3427e+02,8.4268e+01,0.0000e+00,2.6904e+02,3.0381e+02,2.7205e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,11:0,0,14,15 chr1 42046813 . T . PASS END=42046813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 42046814 . G . PASS END=42046814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,922:0,40,255:25,0 chr1 42046815 . C . PASS END=42046817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 42046818 . G . PASS END=42046818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 42046819 . A . PASS END=42046821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 42046822 . G . PASS END=42046823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 42046824 . G . PASS END=42046832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 42046833 . T . PASS END=42046833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr1 42046834 . G . PASS END=42046843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,935:0,81,255:28,0 chr1 42046844 . T . PASS END=42046845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 42046846 . A . PASS END=42046847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42046848 . C . PASS END=42046848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 42046849 . T . PASS END=42046849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42046850 . G . PASS END=42046850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42046851 . G . PASS END=42046871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,897:0,65,255:26,0 chr1 42046872 . G . PASS END=42046872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42046873 . T . PASS END=42046892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,947:0,67,255:26,0 chr1 42046893 . A . PASS END=42046893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,709:0,41,255:23,0 chr1 42046894 . G . PASS END=42046895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 42046896 . A . PASS END=42046896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 42046897 . A . PASS END=42046897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,726:0,33,255:22,0 chr1 42046898 . G . PASS END=42046905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 42046906 . G . PASS END=42046907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,784:0,55,255:21,0 chr1 42046908 . T . PASS END=42046914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 42046915 . A . PASS END=42046916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:21,0 chr1 42046917 . G . PASS END=42046923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr1 42046924 . G . PASS END=42046924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 42046925 . G . PASS END=42046933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,915:0,64,255:26,0 chr1 42046934 . G . PASS END=42046934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,872:0,42,255:23,0 chr1 42046935 . C . PASS END=42046944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 42046945 . G . PASS END=42046984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1041:0,83,255:33,0 chr1 42046985 . A . PASS END=42046985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:31,0 chr1 42046986 . T . PASS END=42046993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:36:0,94,1213:0,94,255:33,0 chr1 42046994 . A . PASS END=42046994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:31,0 chr1 42046995 . C . PASS END=42047064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:32:0,88,1182:0,88,255:36,0 chr1 42047065 . T . PASS END=42047075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 42047076 . T . PASS END=42047081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 42047082 . G . PASS END=42047106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 42047107 . A . PASS END=42047107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 42047108 . G . PASS END=42047110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 42047111 . C . PASS END=42047129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,53,255:19,0 chr1 42047130 . G . PASS END=42047133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 42047134 . C . PASS END=42047142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 42047143 . G . PASS END=42047143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 42047144 . G . PASS END=42047147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 42047148 . G . PASS END=42047164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,837:0,66,255:23,0 chr1 42047165 . T . PASS END=42047165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 42047166 . G . PASS END=42047183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,869:0,69,255:26,0 chr1 42047184 . A . PASS END=42047214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,942:0,81,255:32,0 chr1 42047215 . A . PASS END=42047215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 42047216 . A . PASS END=42047262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1148:0,83,255:37,0 chr1 42047263 . C . PASS END=42047264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 42047265 . C . PASS END=42047265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 42047266 . T . PASS END=42047293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr1 42047294 . A . PASS END=42047294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,764:0,47,255:22,0 chr1 42047295 . C . PASS END=42047299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr1 42047300 . A . PASS END=42047300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 42047301 . T . PASS END=42047321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,946:0,67,255:26,0 chr1 42047322 . G . PASS END=42047322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42047323 . G . PASS END=42047331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,796:0,64,255:26,0 chr1 42047332 . A . PASS END=42047334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 42047335 . A . PASS END=42047344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,956:0,65,255:26,0 chr1 42047345 . T . PASS END=42047364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,875:0,83,255:28,0 chr1 42047365 . A . PASS END=42047365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 42047366 . C . PASS END=42047497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1088:0,80,255:38,0 chr1 42047498 . A . PASS END=42047498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,0 chr1 42047499 . C . PASS END=42047516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1154:0,80,255:31,0 chr1 42047517 . A . PASS END=42047540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:26,0 chr1 42047541 . C . PASS END=42047542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 42047543 . A . PASS END=42047554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:23,0 chr1 42047555 . C . PASS END=42047555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 42047556 . C . PASS END=42047559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 42047560 . G . PASS END=42047560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 42047561 . G . PASS END=42047561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 42047562 . T . PASS END=42047562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,674:0,36,255:18,0 chr1 42047563 . T . PASS END=42047563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 42047564 . T . PASS END=42047565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 42047566 . G . PASS END=42047570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 42047571 . C . PASS END=42047584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 42047585 . G . PASS END=42047623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,652:0,43,255:19,0 chr1 42047624 . A . PASS END=42047624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:20:0,26,477:0,26,255:17,0 chr1 42047625 . C . PASS END=42047633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 42047634 . G . PASS END=42047634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 42047635 . C . PASS END=42047644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:22,0 chr1 42047645 . C . PASS END=42047645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 42047646 . A . PASS END=42047655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 42047656 . A . PASS END=42047656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:21,0 chr1 42047657 . C . PASS END=42047668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,764:0,69,255:24,0 chr1 42047669 . G . PASS END=42047669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr1 42047670 . G . PASS END=42047671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 42047672 . T . PASS END=42047673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 42047674 . G . PASS END=42047704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,853:0,69,255:24,0 chr1 42047705 . A . PASS END=42047705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 42047706 . G . PASS END=42047708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 42047709 . G . PASS END=42047709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 42047710 . G . PASS END=42047712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 42047713 . T . PASS END=42047713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:20,0 chr1 42047714 . C . PASS END=42047730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 42047731 . A . PASS END=42047731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:22,0 chr1 42047732 . T . PASS END=42047754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,795:0,61,255:25,0 chr1 42047755 . T . PASS END=42047756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 42047757 . T . PASS END=42047772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,878:0,75,255:25,0 chr1 42047773 . T . PASS END=42047775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 42047776 . G . PASS END=42047785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,908:0,72,255:24,0 chr1 42047786 . G . PASS END=42047786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 42047787 . G . PASS END=42047804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,939:0,65,255:26,0 chr1 42047805 . C . PASS END=42047805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 42047806 . T . PASS END=42047807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 42047808 . G . PASS END=42047808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 42047809 . G . PASS END=42047814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 42047815 . T . PASS END=42047815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 42047816 . G . PASS END=42047819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 42047820 . C . PASS END=42047821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 42047822 . C . PASS END=42047840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,955:0,67,255:26,0 chr1 42047841 . C . PASS END=42047841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 42047842 . T . PASS END=42047863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,986:0,67,255:26,0 chr1 42047864 . T . PASS END=42047864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:22,0 chr1 42047865 . G . PASS END=42047905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,817:0,65,255:25,0 chr1 42047906 . C . PASS END=42047906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 42047907 . C . PASS END=42047907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 42047908 . T . PASS END=42047908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 42047909 . G . PASS END=42047911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 42047912 . T . PASS END=42047912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:23,0 chr1 42047913 . G . PASS END=42047925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 42047926 . A . PASS END=42047928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 42047929 . A . PASS END=42047943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,892:0,61,255:25,0 chr1 42047944 . G . PASS END=42047957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 42047958 . T . PASS END=42047959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 42047960 . C . PASS END=42047978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,83,255:29,0 chr1 42047979 . T . PASS END=42047979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 42047980 . G . PASS END=42048203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1139:0,83,255:40,0 chr1 42048204 . C . PASS END=42048204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 42048205 . T . PASS END=42048205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 42048206 . T . PASS END=42048206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 42048207 . G . PASS END=42048216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 42048217 . A . PASS END=42048217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 42048218 . G . PASS END=42048225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:28,0 chr1 42048226 . T . PASS END=42048226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 42048227 . T . PASS END=42048231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42048232 . G . PASS END=42048234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 42048235 . G . PASS END=42048238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 42048239 . C . PASS END=42048239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 42048240 . A . PASS END=42048259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 42048260 . A . PASS END=42048260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:29,0 chr1 42048261 . C . PASS END=42048263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 42048264 . A . PASS END=42048264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 42048265 . C . PASS END=42048273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 42048274 . G . PASS END=42048274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 42048275 . A . PASS END=42048286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1154:0,86,255:30,0 chr1 42048287 . G . PASS END=42048293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1011:0,73,255:26,0 chr1 42048294 . T . PASS END=42048294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:24,0 chr1 42048295 . T . PASS END=42048296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 42048297 . C . PASS END=42048299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 42048300 . G . PASS END=42048313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:25,0 chr1 42048314 . T . PASS END=42048314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,865:0,45,255:22,0 chr1 42048315 . C . PASS END=42048322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 42048323 . T . PASS END=42048323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:24,0 chr1 42048324 . C . PASS END=42048324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 42048325 . C . PASS END=42048325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 42048326 . T . PASS END=42048326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 42048327 . C . PASS END=42048340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr1 42048341 . T . PASS END=42048341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 42048342 . G . PASS END=42048639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:31:0,86,1280:0,86,255:40,0 chr1 42048640 . C . PASS END=42048640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1296:0,40,255:33,0 chr1 42048641 . T . PASS END=42048662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,99,255:35,0 chr1 42048663 . A . PASS END=42048707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,872:0,65,255:26,0 chr1 42048708 . C . PASS END=42048714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,969:0,65,255:24,0 chr1 42048715 . C . PASS END=42048715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:21,0 chr1 42048716 . G . PASS END=42048716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 42048717 . G . PASS END=42048717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:23,0 chr1 42048718 . G . PASS END=42048737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 42048738 . A . PASS END=42048738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:23,0 chr1 42048739 . C . PASS END=42048744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 42048745 . T C, 118.31 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:68:156,71,0,864,71,864:255,75,0:0,0:1.1831e+02,6.8313e+01,5.1772e-07,4.5000e+02,1.0308e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,15:0,0,14,10 chr1 42048746 . G . PASS END=42048760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:25,0 chr1 42048761 . A . PASS END=42048761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,751:0,17,255:20,0 chr1 42048762 . G . PASS END=42048762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 42048763 . T . PASS END=42048763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 42048764 . C . PASS END=42048766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 42048767 . T . PASS END=42048768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 42048769 . A . PASS END=42048769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,704:0,19,255:17,0 chr1 42048770 . T . PASS END=42048776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:19,0 chr1 42048777 . A . PASS END=42048777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:17,0 chr1 42048778 . T . PASS END=42048778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 42048779 . C . PASS END=42048779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr1 42048780 . G . PASS END=42048782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 42048783 . G . PASS END=42048787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:18,0 chr1 42048788 . A . PASS END=42048788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:17,0 chr1 42048789 . G . PASS END=42048807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,675:0,44,255:19,0 chr1 42048808 . T . PASS END=42048808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,701:0,30,255:18,2 chr1 42048809 . G . PASS END=42048809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,731:0,3,255:18,2 chr1 42048810 . G . PASS END=42048810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 42048811 . G . PASS END=42048815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 42048816 . G . PASS END=42048816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 42048817 . C . PASS END=42048817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 42048818 . T . PASS END=42048818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 42048819 . G . PASS END=42048819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,715:0,35,255:21,0 chr1 42048820 . A . PASS END=42048821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 42048822 . A . PASS END=42048822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 42048823 . G . PASS END=42048829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,748:0,66,255:22,0 chr1 42048830 . C . PASS END=42048830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 42048831 . G . PASS END=42048834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 42048835 . G . PASS END=42048835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 42048836 . A . PASS END=42048842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr1 42048843 . T . PASS END=42048843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 42048844 . G . PASS END=42048844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 42048845 . A . PASS END=42048845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 42048846 . G . PASS END=42048849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 42048850 . C . PASS END=42048850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 42048851 . T . PASS END=42048852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 42048853 . C . PASS END=42048855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 42048856 . A . PASS END=42048858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 42048859 . A . PASS END=42048862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:18,0 chr1 42048863 . G . PASS END=42048863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,713:0,14,255:16,0 chr1 42048864 . C . PASS END=42048866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:18,0 chr1 42048867 . A . PASS END=42048867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:16,0 chr1 42048868 . G . PASS END=42048873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 42048874 . G . LowGQ END=42048874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,734:0,0,255:19,0 chr1 42048875 . C . PASS END=42048889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,939:0,67,255:26,0 chr1 42048890 . G . PASS END=42048893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42048894 . G . PASS END=42048896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 42048897 . G . PASS END=42048913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42048914 . C . PASS END=42048927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:24,0 chr1 42048928 . T . PASS END=42048928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 42048929 . C . PASS END=42048951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 42048952 . C . PASS END=42048953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42048954 . G . PASS END=42048954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 42048955 . T . PASS END=42048962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 42048963 . G . PASS END=42048963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 42048964 . G . PASS END=42048968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 42048969 . T . PASS END=42048969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 42048970 . G . PASS END=42048985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 42048986 . T . PASS END=42048987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 42048988 . C . PASS END=42048994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 42048995 . A . PASS END=42049009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 42049010 . T . PASS END=42049012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,972:0,70,255:26,0 chr1 42049013 . G . PASS END=42049014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 42049015 . T . PASS END=42049015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:26,0 chr1 42049016 . T . PASS END=42049016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42049017 . C . PASS END=42049028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,947:0,67,255:27,0 chr1 42049029 . C . PASS END=42049029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 42049030 . T . PASS END=42049031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 42049032 . G A, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,13,0:0,15,0:81:169,84,0,1078,84,1078:255,84,0:0,0:1.3127e+02,8.1269e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,16:0,0,13,15 chr1 42049033 . C . PASS END=42049033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 42049034 . T . PASS END=42049038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 42049039 . T . PASS END=42049050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,1000:0,68,255:26,0 chr1 42049051 . T . PASS END=42049051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:23,0 chr1 42049052 . C . PASS END=42049054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,846:0,61,255:24,0 chr1 42049055 . T . PASS END=42049055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 42049056 . G . PASS END=42049069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:26,0 chr1 42049070 . T . PASS END=42049086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 42049087 . A . PASS END=42049087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 42049088 . C . PASS END=42049090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 42049091 . G . PASS END=42049093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:23:0,56,837:0,56,255:21,0 chr1 42049094 . T . PASS END=42049097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 42049098 . G . PASS END=42049102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 42049103 . C . PASS END=42049114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:19,0 chr1 42049115 . C . PASS END=42049126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,800:0,63,255:23,0 chr1 42049127 . T . PASS END=42049127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 42049128 . G . PASS END=42049139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 42049140 . C G, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,10,0:0,14,0:69:157,72,0,911,72,911:255,72,0:0,0:1.1923e+02,6.9227e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,12:0,0,14,10 chr1 42049141 . A . PASS END=42049162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr1 42049163 . A . PASS END=42049163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 42049164 . G . PASS END=42049177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:26,0 chr1 42049178 . T . PASS END=42049179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 42049180 . G . PASS END=42049186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 42049187 . G . PASS END=42049189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 42049190 . G . PASS END=42049312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1030:0,80,255:34,0 chr1 42049313 . T . PASS END=42049316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 42049317 . G . PASS END=42049317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:25,0 chr1 42049318 . C . PASS END=42049335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 42049336 . T . PASS END=42049336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 42049337 . G . PASS END=42049338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 42049339 . T . PASS END=42049339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 42049340 . C . PASS END=42049350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 42049351 . T . PASS END=42049351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,831:0,31,255:21,0 chr1 42049352 . T . PASS END=42049368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 42049369 . C . PASS END=42049384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:21:0,48,717:0,52,255:19,0 chr1 42049385 . G . PASS END=42049399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 42049400 . T . PASS END=42049400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 42049401 . G . PASS END=42049406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,832:0,61,255:24,0 chr1 42049407 . A . PASS END=42049407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,815:0,36,255:22,0 chr1 42049408 . G . PASS END=42049415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr1 42049416 . G . PASS END=42049417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr1 42049418 . T . PASS END=42049418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 42049419 . C . PASS END=42049421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr1 42049422 . G . PASS END=42049422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 42049423 . G . PASS END=42049423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 42049424 . G . PASS END=42049424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 42049425 . G . PASS END=42049425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 42049426 . T . PASS END=42049426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 42049427 . G . PASS END=42049451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:31:0,93,1156:0,93,255:38,0 chr1 42049452 . A . PASS END=42049453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:35,0 chr1 42049454 . G . PASS END=42049455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:36,0 chr1 42049456 . G . PASS END=42049456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:34,0 chr1 42049457 . G . PASS END=42049457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 42049458 . G . PASS END=42049459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1185:0,61,255:36,0 chr1 42049460 . C . PASS END=42049461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1360:0,86,255:37,0 chr1 42049462 . T . PASS END=42049466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:37,0 chr1 42049467 . T . PASS END=42049525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1125:0,80,255:40,0 chr1 42049526 . C . PASS END=42049527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 42049528 . G . PASS END=42049529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 42049530 . G . PASS END=42049532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:33:0,78,1170:0,99,255:26,0 chr1 42049533 . G . PASS END=42049567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,999:0,90,255:30,0 chr1 42049568 . T . PASS END=42049588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:26,0 chr1 42049589 . G . PASS END=42049590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42049591 . C . PASS END=42049607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 42049608 . C . PASS END=42049619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 42049620 . A . PASS END=42049625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 42049626 . G . PASS END=42049631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 42049632 . T . PASS END=42049632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 42049633 . C . PASS END=42049635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 42049636 . T . PASS END=42049636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:30,0 chr1 42049637 . C . PASS END=42049649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1133:0,80,255:31,0 chr1 42049650 . A . PASS END=42049652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:30,0 chr1 42049653 . C . PASS END=42049653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 42049654 . T . PASS END=42049654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1024:0,79,255:30,0 chr1 42049655 . C . PASS END=42049656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:30,0 chr1 42049657 . T . PASS END=42049657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:30,0 chr1 42049658 . C . PASS END=42049734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1133:0,82,255:36,0 chr1 42049735 . C . PASS END=42049735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr1 42049736 . G . PASS END=42049742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 42049743 . A . PASS END=42049743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 42049744 . T . PASS END=42049745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 42049746 . G . PASS END=42049751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1037:0,71,255:26,0 chr1 42049752 . C . PASS END=42049752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 42049753 . C . PASS END=42049758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1000:0,60,255:26,0 chr1 42049759 . T . PASS END=42049762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 42049763 . A . PASS END=42049763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 42049764 . G . PASS END=42049766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,981:0,90,255:30,0 chr1 42049767 . A . PASS END=42049768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 42049769 . T . PASS END=42049775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 42049776 . G . PASS END=42049776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 42049777 . G . PASS END=42049777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 42049778 . T . PASS END=42049779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:29:0,62,1031:0,62,255:28,0 chr1 42049780 . T . PASS END=42049791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,967:0,87,255:29,0 chr1 42049792 . C . PASS END=42049792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 42049793 . C . PASS END=42049793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 42049794 . A . PASS END=42049807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 42049808 . G . PASS END=42049811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 42049812 . G . PASS END=42049850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,884:0,66,255:24,0 chr1 42049851 . C . PASS END=42049851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 42049852 . A . PASS END=42049890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,945:0,62,255:25,0 chr1 42049891 . A . PASS END=42049891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:21,0 chr1 42049892 . T . PASS END=42049900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 42049901 . C . PASS END=42049925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,765:0,50,255:19,0 chr1 42049926 . C . PASS END=42049929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 42049930 . T . PASS END=42049936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 42049937 . C . PASS END=42049937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 42049938 . T . PASS END=42049938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 42049939 . T . PASS END=42049944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 42049945 . G . PASS END=42049956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,765:0,50,255:19,0 chr1 42049957 . A . PASS END=42049957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 42049958 . C . PASS END=42049979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:19:0,44,720:0,44,255:19,0 chr1 42049980 . G . PASS END=42049980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 42049981 . A . PASS END=42049981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 42049982 . C . PASS END=42050005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:23,0 chr1 42050006 . C . PASS END=42050007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:25:0,40,795:0,40,255:22,1 chr1 42050008 . G . PASS END=42050008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 42050009 . G . PASS END=42050015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 42050016 . G . PASS END=42050016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 42050017 . A . PASS END=42050045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,845:0,64,255:26,0 chr1 42050046 . C . PASS END=42050060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1039:0,84,255:29,0 chr1 42050061 . A . PASS END=42050061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 42050062 . G . PASS END=42050076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 42050077 . C . PASS END=42050077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 42050078 . C . PASS END=42050081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42050082 . G . PASS END=42050082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,906:0,37,255:25,0 chr1 42050083 . G . PASS END=42050134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1202:0,81,255:37,0 chr1 42050135 . G . PASS END=42050135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr1 42050136 . C . PASS END=42050138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:35,0 chr1 42050139 . A . PASS END=42050139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1244:0,72,255:33,0 chr1 42050140 . G . PASS END=42050167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1143:0,86,255:35,0 chr1 42050168 . T . PASS END=42050168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:30,0 chr1 42050169 . C . PASS END=42050196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1097:0,82,255:32,0 chr1 42050197 . T . PASS END=42050198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:74:30:0,74,1047:0,74,255:28,0 chr1 42050199 . G . PASS END=42050201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 42050202 . G . PASS END=42050202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:26,0 chr1 42050203 . G . PASS END=42050204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42050205 . T . PASS END=42050205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:24,0 chr1 42050206 . G . PASS END=42050208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 42050209 . T . PASS END=42050209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:24,0 chr1 42050210 . C . PASS END=42050222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,864:0,64,255:26,0 chr1 42050223 . T . PASS END=42050224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,743:0,28,255:21,0 chr1 42050225 . T . PASS END=42050242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,797:0,61,255:23,0 chr1 42050243 . G . PASS END=42050243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 42050244 . G . PASS END=42050263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 42050264 . C . PASS END=42050273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 42050274 . A . PASS END=42050274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 42050275 . A . PASS END=42050275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:20,0 chr1 42050276 . C . PASS END=42050282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 42050283 . G . PASS END=42050283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 42050284 . G . PASS END=42050291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:24,0 chr1 42050292 . G . PASS END=42050292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 42050293 . A . PASS END=42050300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 42050301 . C . PASS END=42050301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 42050302 . G . PASS END=42050319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,797:0,61,255:24,0 chr1 42050320 . G . PASS END=42050320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 42050321 . C . PASS END=42050321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:20,0 chr1 42050322 . G . PASS END=42050322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 42050323 . G . PASS END=42050323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:19,0 chr1 42050324 . G . PASS END=42050325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 42050326 . C . PASS END=42050327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 42050328 . C . PASS END=42050328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:17,0 chr1 42050329 . T . PASS END=42050351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,599:0,51,255:19,0 chr1 42050352 . G . PASS END=42050354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 42050355 . T . PASS END=42050355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 42050356 . G . PASS END=42050359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 42050360 . A . PASS END=42050360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 42050361 . T . PASS END=42050386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 42050387 . G . PASS END=42050394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42050395 . T . PASS END=42050395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 42050396 . C . PASS END=42050408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 42050409 . C . PASS END=42050409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 42050410 . C . PASS END=42050412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 42050413 . T . PASS END=42050413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:26,0 chr1 42050414 . T . PASS END=42050415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 42050416 . C . PASS END=42050416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,2 chr1 42050417 . G . PASS END=42050417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1055:0,24,255:27,2 chr1 42050418 . G . PASS END=42050418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1014:0,35,255:27,0 chr1 42050419 . G . PASS END=42050423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,87,255:29,0 chr1 42050424 . T . PASS END=42050424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 42050425 . C . PASS END=42050435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 42050436 . C . PASS END=42050436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 42050437 . T . PASS END=42050437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 42050438 . T . PASS END=42050438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 42050439 . G . PASS END=42050439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 42050440 . G . PASS END=42050440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 42050441 . T . PASS END=42050441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 42050442 . G . PASS END=42050459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:25:0,70,968:0,70,255:26,0 chr1 42050460 . A . PASS END=42050461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 42050462 . G . PASS END=42050468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 42050977 . T . PASS END=42050989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,114,1604:0,115,255:40,0 chr1 42094420 . C . PASS END=42094460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,132,255:40,0 chr1 42094461 . C . PASS END=42094487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,158,255:40,0 chr1 42619122 . A . PASS END=42619138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1047:0,84,255:37,0 chr1 42619139 . A G, 49.94 PASS DP=37;MQ=248.94;MQRankSum=5.181;ReadPosRankSum=2.872;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,0:0.486,0.000:37:12,9,0:7,9,0:48:85,0,50,644,671,1315:255,0,255:19,0:4.9944e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,11,7:10,9,10,8 chr1 42619140 . T . PASS END=42619176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,111,1374:0,111,255:39,0 chr1 42619177 . T . PASS END=42619205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:36,0 chr1 42619206 . A . PASS END=42619211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:28:0,75,1125:0,84,255:25,0 chr1 42620351 . T . PASS END=42620378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:19,0 chr1 42620379 . C . PASS END=42620462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,807:0,66,255:26,0 chr1 42620463 . A . PASS END=42620470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 42620471 . G . PASS END=42620473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 42620474 . C . PASS END=42620534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:19,0 chr1 42620535 . T . PASS END=42620537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 42621206 . G . PASS END=42621267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,155,255:40,0 chr1 42628577 . C . PASS END=42628585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 42628586 . G . PASS END=42628607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:30,0 chr1 42628608 . A . PASS END=42628608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 42628609 . T . PASS END=42628616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:29,0 chr1 42628617 . G . PASS END=42628618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 42628619 . G . PASS END=42628621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 42628622 . C . PASS END=42628623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 42628624 . G . PASS END=42628631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 42628632 . G . PASS END=42628641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 42629074 . C . PASS END=42629077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr1 42629078 . C . PASS END=42629082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr1 42629083 . G . PASS END=42629083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 42629084 . A . PASS END=42629099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 42629100 . T . PASS END=42629100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 42629101 . T . PASS END=42629111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 42629112 . C . PASS END=42629112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,906:0,47,255:25,0 chr1 42629113 . A . PASS END=42629131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr1 42629132 . T . PASS END=42629134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 42629135 . A . PASS END=42629146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 42629147 . G . PASS END=42629150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 42629151 . C . PASS END=42629187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 42629188 . C . PASS END=42629188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 42629189 . A . PASS END=42629196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:26,0 chr1 42629197 . T . PASS END=42629197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 42629198 . G . PASS END=42629202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 42629203 . T . PASS END=42629211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1133:0,80,255:30,0 chr1 42629212 . T . PASS END=42629215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 42629216 . C . PASS END=42629221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 42629222 . G . PASS END=42629231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 42629232 . A . PASS END=42629232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 42629233 . G . PASS END=42629242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 42629243 . C . PASS END=42629268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:22:0,66,770:0,66,255:26,0 chr1 42629269 . A . PASS END=42629269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 42629270 . G . PASS END=42629281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,764:0,66,255:23,0 chr1 42630309 . C . PASS END=42630310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 42630311 . G . PASS END=42630321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 42630322 . C . PASS END=42630326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 42630327 . T . PASS END=42630327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 42630328 . G . PASS END=42630343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1022:0,68,255:26,0 chr1 42630344 . C . PASS END=42630363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 42630364 . G A, 45.33 PASS DP=33;MQ=250.00;MQRankSum=4.652;ReadPosRankSum=2.005;FractionInformativeReads=0.970;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,12,0:0.375,0.000:32:12,6,0:8,6,0:45:80,0,50,400,707,1107:255,0,255:18,0:4.5328e+01,1.4911e-04,5.3000e+01,4.0043e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,5,7:6,14,7,5 chr1 42630365 . A . PASS END=42630366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 42630367 . A . PASS END=42630367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr1 42630368 . G . PASS END=42630383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 42645381 . C . PASS END=42645496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:39:0,93,1395:0,109,255:40,0 chr1 42647588 . C . PASS END=42647616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:86:47:0,86,1605:0,86,255:40,0 chr1 42647617 . G . PASS END=42647668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:80:51:0,80,1796:0,80,255:40,1 chr1 42647669 . T . PASS END=42647669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:33:50:0,33,1470:0,33,255:40,0 chr1 42647670 . T . PASS END=42647695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:39:0,88,1504:0,88,255:40,0 chr1 42654408 . C . PASS END=42654416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1149:0,83,255:35,0 chr1 42654417 . T . PASS END=42654417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1195:0,74,255:34,0 chr1 42654418 . G . PASS END=42654589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:36:0,81,1215:0,91,255:40,0 chr1 42654590 . T . PASS END=42654592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1209:0,63,255:27,0 chr1 42654593 . A . PASS END=42654595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 42654596 . A . PASS END=42654599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:24,0 chr1 42654974 . C . PASS END=42655075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,125,255:40,0 chr1 42656974 . C . PASS END=42656988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:18,0 chr1 42656989 . C . PASS END=42656989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 42656990 . C . PASS END=42657007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,516:0,51,255:18,0 chr1 42657008 . T . PASS END=42657009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 42657010 . C . PASS END=42657010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 42657011 . C . PASS END=42657012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 42657013 . G . PASS END=42657013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 42657014 . A . PASS END=42657037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,881:0,72,255:26,0 chr1 42657038 . G . PASS END=42657042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42657043 . G . PASS END=42657055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,77,255:25,0 chr1 42657056 . G . PASS END=42657056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42657057 . T . PASS END=42657071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 42657072 . G . PASS END=42657083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 42657084 . T . PASS END=42657084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 42657085 . G . PASS END=42657149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:36,0 chr1 42657150 . T . PASS END=42657150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:35,0 chr1 42657151 . G . PASS END=42657345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:37:0,91,1395:0,91,255:40,0 chr1 42657346 . A . PASS END=42657369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:26,0 chr1 42657370 . C . PASS END=42657390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,50,255:19,0 chr1 42660561 . C . PASS END=42660735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:46:0,102,1530:0,127,255:40,0 chr1 42664773 . C . PASS END=42664774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 42664775 . G . PASS END=42664776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 42664777 . G . PASS END=42664777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 42664778 . T . PASS END=42664778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,931:0,43,255:27,0 chr1 42664779 . A . PASS END=42664881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1260:0,82,255:40,0 chr1 42664882 . T . PASS END=42664884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,99,255:25,0 chr1 42664885 . G . PASS END=42664901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:20:0,51,765:0,60,255:19,0 chr1 42671433 . T . PASS END=42671534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:40:0,108,1620:0,113,255:40,0 chr1 42693554 . C . PASS END=42693559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,117,1474:0,117,255:40,0 chr1 42693560 . T . PASS END=42693596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,113,1596:0,113,255:40,0 chr1 42693597 . A G, 202.59 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,25,0:0,27,0:153:240,156,0,1949,156,1949:255,156,0:0,0:2.0259e+02,1.5259e+02,0.0000e+00,4.5000e+02,1.8736e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,28:0,0,23,29 chr1 42693598 . C . PASS END=42693634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,105,1575:0,134,255:40,0 chr1 42693635 . C . PASS END=42693637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr1 42730723 . T . PASS END=42730860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,2:103:99:62:0,120,1800:0,186,255:40,0 chr1 42731447 . C . PASS END=42731509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,167,255:40,0 chr1 42744019 . C . PASS END=42744028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,862:0,62,255:26,0 chr1 42744029 . C . PASS END=42744032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 42744033 . C . PASS END=42744033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 42744034 . A . PASS END=42744330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:86:29:0,86,1064:0,86,255:40,2 chr1 42744331 . T . PASS END=42744331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1085:0,69,255:26,0 chr1 42744332 . T . PASS END=42744343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 42745957 . C . PASS END=42745974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,180,255:40,0 chr1 42745975 . G C, 271.81 PASS DP=75;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,75,0:1.000,0.000:75:0,31,0:0,44,0:222:310,225,0,2850,225,2850:255,225,0:0,0:2.7181e+02,2.2181e+02,0.0000e+00,4.5000e+02,2.5658e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,37:0,0,32,43 chr1 42745976 . A . PASS END=42746012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,211,255:40,0 chr1 42746013 . T . PASS END=42746024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,194,255:40,0 chr1 42776721 . C . PASS END=42776742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,163,255:40,0 chr1 42776743 . A . PASS END=42776764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:70:0,120,1800:0,177,255:40,0 chr1 42846606 . A . PASS END=42846627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 42846628 . T . PASS END=42846648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,333:0,30,255:10,0 chr1 42846649 . A . PASS END=42846654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 42846655 . A . PASS END=42846674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 42846675 . C . PASS END=42846680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 42846681 . C . PASS END=42846681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 42846682 . T . PASS END=42846688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,327:0,27,255:9,0 chr1 42846689 . G . PASS END=42846696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 42846697 . C . PASS END=42846698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 42846699 . G . PASS END=42846724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 42846725 . G . PASS END=42846726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 42846727 . T . LowGQ END=42846727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:8,0 chr1 42846728 . T . PASS END=42846734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 42846735 . C . PASS END=42846744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 42846745 . T . PASS END=42846753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 42846754 . T . PASS END=42846768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 42865075 . G . PASS END=42865081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 42865082 . G . PASS END=42865083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42865084 . T . PASS END=42865086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 42865087 . A . PASS END=42865087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,951:0,54,255:25,0 chr1 42865088 . C . PASS END=42865092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 42865093 . A . PASS END=42865093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:29,0 chr1 42865094 . G . PASS END=42865214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:33,0 chr1 42865215 . C . PASS END=42865215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr1 42865216 . C . PASS END=42865219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 42865220 . G . PASS END=42865220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 42865221 . A . PASS END=42865221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42865222 . G . PASS END=42865223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 42865224 . A . PASS END=42865235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 42865236 . A . PASS END=42865237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 42865238 . C . PASS END=42865239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42865240 . A . PASS END=42865240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,851:0,34,255:24,0 chr1 42865241 . C . PASS END=42865247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 42865248 . T . PASS END=42865274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 42865275 . G . PASS END=42865275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 42865276 . G . PASS END=42865280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 42865281 . C . PASS END=42865291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,44,255:19,0 chr1 42865292 . C . PASS END=42865295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:12,0 chr1 42865296 . T . PASS END=42865303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:21:12:0,21,315:0,36,255:9,0 chr1 42865304 . T . PASS END=42865305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 42870182 . G . PASS END=42870223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1125:0,87,255:35,0 chr1 42870224 . C . PASS END=42870224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 42870225 . C . PASS END=42870225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 42870226 . C . PASS END=42870227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:33,0 chr1 42870228 . G . PASS END=42870250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,86,255:34,0 chr1 42870251 . G . PASS END=42870268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:26:0,71,941:0,71,255:26,0 chr1 42875655 . G . PASS END=42875675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 42875676 . G . PASS END=42875680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 42875681 . A . PASS END=42875681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 42875682 . A . PASS END=42875695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,870:0,69,255:25,0 chr1 42875696 . G . PASS END=42875712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 42875713 . C . PASS END=42875713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 42875714 . C . PASS END=42875814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1215:0,84,255:40,0 chr1 42875815 . T . PASS END=42875839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 42875840 . C . PASS END=42875841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 42875842 . G . PASS END=42875851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:20,0 chr1 42875852 . T . PASS END=42875852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 42875853 . C . PASS END=42875853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 42875854 . T . PASS END=42875858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 42880155 . G . PASS END=42880169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:26,0 chr1 42880170 . A . PASS END=42880170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,909:0,50,255:25,0 chr1 42880171 . G . PASS END=42880171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 42880172 . T . PASS END=42880172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr1 42880173 . G . PASS END=42880179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr1 42880180 . G . PASS END=42880190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,940:0,81,255:30,0 chr1 42880191 . G . PASS END=42880191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 42880192 . C . PASS END=42880198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 42880199 . T . PASS END=42880199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,900:0,40,255:26,0 chr1 42880200 . T . PASS END=42880210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 42880211 . G . PASS END=42880214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 42880215 . C . PASS END=42880216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42880217 . A . PASS END=42880218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1024:0,71,255:25,0 chr1 42880219 . C . PASS END=42880222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 42880223 . C . PASS END=42880224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 42880225 . A . PASS END=42880226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 42880227 . G . PASS END=42880227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 42880228 . C . PASS END=42880228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 42880229 . A . PASS END=42880268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 42880269 . G . PASS END=42880269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 42880270 . C . PASS END=42880279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,848:0,61,255:25,0 chr1 42880280 . G . PASS END=42880280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 42880281 . T . PASS END=42880281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 42880282 . G . PASS END=42880332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,876:0,61,255:26,0 chr1 42880333 . C . PASS END=42880333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42880334 . T . PASS END=42880336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 42880337 . G . PASS END=42880403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:36,0 chr1 42880404 . C . PASS END=42880404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 42880405 . T . PASS END=42880520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1224:0,83,255:39,0 chr1 42880521 . G . PASS END=42880521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 42880522 . T . PASS END=42880586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,933:0,83,255:32,0 chr1 42880587 . T . PASS END=42880587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 42880588 . G . PASS END=42880596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1194:0,93,255:31,0 chr1 42880597 . T . PASS END=42880612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,947:0,67,255:26,0 chr1 42880613 . A . PASS END=42880613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:22,0 chr1 42880614 . A . PASS END=42880614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 42880615 . C . PASS END=42880615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 42880616 . A . PASS END=42880622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 42880623 . C . PASS END=42880625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 42880626 . C . PASS END=42880626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 42880627 . T . PASS END=42880631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,55,255:19,0 chr1 42880632 . T . PASS END=42880632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:15,0 chr1 42880633 . A . PASS END=42880639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:17:0,48,720:0,50,255:16,0 chr1 42880640 . A . PASS END=42880641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 42880642 . G . PASS END=42880645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:16,0 chr1 42896407 . C . PASS END=42896529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,100,1721:0,100,255:40,0 chr1 42898814 . C . PASS END=42898842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:35:0,82,1250:0,82,255:40,0 chr1 42898843 . A G, 251.64 PASS DP=68;MQ=249.55;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,28,0:0,40,0:202:289,205,0,2579,205,2579:255,207,0:0,0:2.5164e+02,2.0164e+02,0.0000e+00,4.5000e+02,2.3641e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,44,24:0,0,36,32 chr1 42898844 . C . PASS END=42898880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:69:0,120,1800:0,191,255:40,0 chr1 42898881 . G . PASS END=42898959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:50:0,120,1800:0,133,255:40,0 chr1 42900945 . C . PASS END=42901056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,121,255:40,0 chr1 42902092 . C . PASS END=42902214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:36:0,94,1252:0,94,255:40,0 chr1 42905527 . A . PASS END=42905527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 42905528 . T . PASS END=42905534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 42905535 . C . PASS END=42905535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 42905536 . C . PASS END=42905536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 42905537 . A . PASS END=42905537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:24,0 chr1 42905538 . G . PASS END=42905538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 42905539 . A . PASS END=42905539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1146:0,75,255:33,0 chr1 42905540 . T . PASS END=42905696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1260:0,81,255:40,0 chr1 42914138 . C . PASS END=42914158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,645:0,41,255:19,0 chr1 42914159 . G . PASS END=42914163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 42914164 . T . PASS END=42914169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 42914170 . G . PASS END=42914174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 42914175 . A . PASS END=42914176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 42914177 . G . PASS END=42914179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,958:0,70,255:26,0 chr1 42914180 . C . PASS END=42914190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 42914191 . A . PASS END=42914191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 42914192 . G . PASS END=42914273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:31:0,80,1185:0,80,255:37,0 chr1 42914274 . C . PASS END=42914285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:25,0 chr1 42914286 . G . PASS END=42914286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 42914287 . T . PASS END=42914290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 42914291 . A . PASS END=42914291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 42914292 . G . PASS END=42914306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 42914307 . C . PASS END=42914307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 42914308 . T . PASS END=42914309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 42915589 . C . PASS END=42915596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr1 42915597 . G . PASS END=42915597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 42915598 . C . PASS END=42915605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:26,0 chr1 42915606 . G . PASS END=42915610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 42915611 . A . PASS END=42915611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 42915612 . G . PASS END=42915612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 42915613 . G . PASS END=42915613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 42915614 . C . PASS END=42915630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1111:0,82,255:33,0 chr1 42915631 . C . PASS END=42915631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:30,0 chr1 42915632 . T . PASS END=42915689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1180:0,83,255:39,0 chr1 42915690 . C . PASS END=42915702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1333:0,95,255:35,0 chr1 42915703 . C . PASS END=42915703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr1 42915704 . C . PASS END=42915704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 42915705 . A . PASS END=42915705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr1 42915706 . G . PASS END=42915708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr1 42915709 . A . PASS END=42915709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:29,0 chr1 42915710 . G . PASS END=42915712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 42915713 . T . PASS END=42915726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:25,0 chr1 42915727 . C G, 119.23 PASS DP=25;MQ=250.00;FractionInformativeReads=0.960 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,7,0:0,17,0:69:157,72,0,920,72,920:255,72,0:0,0:1.1923e+02,6.9230e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,16:0,0,17,7 chr1 42915728 . C . PASS END=42915730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 42921559 . C . PASS END=42921594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:25,0 chr1 42921595 . T . PASS END=42921595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 42921596 . C . PASS END=42921624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr1 42921625 . A . PASS END=42921625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 42921626 . G . PASS END=42921668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:25,0 chr1 42922237 . A . PASS END=42922239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 42922240 . G . PASS END=42922243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 42922244 . A . PASS END=42922252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 42922253 . C . PASS END=42922267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 42922268 . C . PASS END=42922282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,675:0,44,255:19,0 chr1 42922283 . C . PASS END=42922289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 42922290 . C . PASS END=42922290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 42922291 . T . PASS END=42922291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 42922292 . G . PASS END=42922299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,620:0,48,255:16,0 chr1 42922300 . G . PASS END=42922300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 42922301 . T . PASS END=42922301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 42922302 . T . PASS END=42922302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr1 42922303 . A . PASS END=42922307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 42922308 . T . PASS END=42922317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 42922318 . G . PASS END=42922324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 42922325 . T . PASS END=42922348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 42922349 . T . PASS END=42922349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 42922350 . G . PASS END=42922350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 42922351 . T . PASS END=42922451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,559:0,41,255:19,0 chr1 42922452 . C . PASS END=42922455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 42922456 . C . PASS END=42922473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,706:0,57,255:19,0 chr1 42922474 . G . PASS END=42922502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:26,0 chr1 42922503 . C . PASS END=42922505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,919:0,42,255:24,1 chr1 42922506 . C . PASS END=42922522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,890:0,64,255:26,0 chr1 42922523 . T . PASS END=42922523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1007:0,81,255:27,0 chr1 42922524 . C . PASS END=42922526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 42922527 . A . PASS END=42922530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 42922531 . C . PASS END=42922531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 42922532 . A . PASS END=42922535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42922536 . T . PASS END=42922536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,848:0,54,255:25,0 chr1 42922537 . T . PASS END=42922537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 42922538 . G . PASS END=42922544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 42922545 . C . PASS END=42922545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 42922546 . G . PASS END=42922551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 42922552 . C . PASS END=42922611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,854:0,62,255:26,0 chr1 42922612 . C . PASS END=42922612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:23,0 chr1 42922613 . C . PASS END=42922626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,894:0,62,255:26,0 chr1 42922627 . G . PASS END=42922631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42922632 . G . PASS END=42922638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1078:0,74,255:25,0 chr1 42922639 . T . PASS END=42922642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 42922643 . A . PASS END=42922646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr1 42922647 . G . PASS END=42922647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 42922648 . G . PASS END=42922648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 42922649 . C . PASS END=42922660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 42922661 . G . PASS END=42922661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 42922662 . C . PASS END=42922662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 42922663 . A . PASS END=42922663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 42922664 . C . PASS END=42922664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 42922665 . C . PASS END=42922669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 42922670 . T . PASS END=42922675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 42922676 . T . PASS END=42922689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,954:0,68,255:26,0 chr1 42922690 . T . PASS END=42922695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 42922696 . G . PASS END=42922744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,823:0,69,255:25,0 chr1 42922918 . G . PASS END=42923051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:36:0,90,1272:0,92,255:40,0 chr1 42925274 . A . PASS END=42925275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr1 42925276 . A . PASS END=42925276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:32,0 chr1 42925277 . A . PASS END=42925597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:34:0,96,1377:0,102,255:40,0 chr1 42938793 . G . PASS END=42938915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:62:0,120,1800:0,136,255:40,0 chr1 42938957 . A . PASS END=42938958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 42938959 . G . PASS END=42938974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:27:0,67,947:0,67,255:26,0 chr1 42948334 . T . PASS END=42948349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,113,1800:0,113,255:40,0 chr1 42948350 . T . PASS END=42948350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:59:61:0,59,2031:0,59,255:40,0 chr1 42948351 . G . PASS END=42948519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:60:0,120,1800:0,125,255:40,0 chr1 42948520 . C . PASS END=42948561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:49:0,92,1530:0,92,255:40,0 chr1 42955829 . A . PASS END=42955900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:72:0,120,1800:0,200,255:40,0 chr1 42962769 . A . PASS END=42962884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:67:0,120,1800:0,167,255:40,0 chr1 42964489 . G . PASS END=42964587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,101,1370:0,101,255:40,0 chr1 42995273 . G . PASS END=42995301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1213:0,89,255:38,0 chr1 42995302 . T G, 161.37 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,17,0:0,21,0:111:199,114,0,1464,114,1464:255,114,0:0,0:1.6137e+02,1.1137e+02,0.0000e+00,4.5000e+02,1.4614e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,22:0,0,21,17 chr1 42995303 . G . PASS END=42995339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1435:0,114,255:40,0 chr1 42995340 . G . PASS END=42995341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,99,1485:0,108,255:33,0 chr1 43000560 . A . PASS END=43000601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:44:0,95,1627:0,95,255:40,0 chr1 43002147 . A . PASS END=43002153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:100:0,120,1800:0,255,255:40,0 chr1 43002154 . A . PASS END=43002198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:103:0,120,1800:0,252,255:40,0 chr1 43002199 . A . LowGQ END=43002202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,24:121:0:115:0,0,2805:234,0,255:40,22 chr1 43002203 . G . PASS END=43002271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:70:0,120,1800:0,157,255:40,2 chr1 43002272 . G . LowGQ END=43002272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,12:70:0:70:0,0,1610:40,0,255:40,0 chr1 43002863 . A . PASS END=43002875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1202:0,86,255:34,0 chr1 43002876 . T . PASS END=43002876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:32,0 chr1 43002877 . C . PASS END=43002913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1188:0,83,255:34,0 chr1 43002914 . A . PASS END=43002914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:31,0 chr1 43002915 . T . PASS END=43002925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1125:0,82,255:33,0 chr1 43002926 . A . PASS END=43002931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:32:0,75,1125:0,83,255:26,0 chr1 43004844 . G . PASS END=43004981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,120,1800:0,140,255:40,0 chr1 43006972 . A . PASS END=43006990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,108,1627:0,108,255:40,0 chr1 43006991 . G . PASS END=43007037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:35:0,90,1350:0,105,255:40,0 chr1 43011081 . G . PASS END=43011250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,117,1421:0,117,255:40,0 chr1 43021827 . T . PASS END=43021831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:32,0 chr1 43021832 . A . PASS END=43021832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 43021833 . A . PASS END=43021847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1004:0,82,255:32,0 chr1 43021848 . G . PASS END=43021913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:32:0,86,1202:0,86,255:40,0 chr1 43021914 . G . PASS END=43021914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,7:60:64:60:0,64,1788:0,64,255:40,0 chr1 43021915 . G . PASS END=43022072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:29:0,81,1215:0,87,255:40,0 chr1 43022073 . C . PASS END=43022076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,992:0,68,255:24,0 chr1 43031967 . C . PASS END=43032311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:36:0,81,1215:0,87,255:40,0 chr1 43032312 . G . PASS END=43032332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,870:0,72,255:26,0 chr1 43042691 . A . PASS END=43042702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,107,1232:0,107,255:40,0 chr1 43042703 . C T, 170.39 PASS DP=42;MQ=249.98;FractionInformativeReads=0.976 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,18,0:0,23,0:120:208,123,0,1574,123,1574:255,126,0:0,0:1.7039e+02,1.2039e+02,0.0000e+00,4.5000e+02,1.5516e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,16:0,0,20,21 chr1 43042704 . T . PASS END=43042740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,109,1468:0,109,255:40,0 chr1 43042741 . G . PASS END=43042900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:56:0,120,1800:0,130,255:40,0 chr1 43047031 . A . PASS END=43047041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,866:0,78,255:26,0 chr1 43047042 . G . PASS END=43047056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,994:0,81,255:35,0 chr1 43047057 . A G, 152.33 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,22,0:0,13,0:102:190,105,0,1340,105,1340:255,105,0:0,0:1.5233e+02,1.0233e+02,0.0000e+00,4.5000e+02,1.3710e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,12:0,0,20,15 chr1 43047058 . C . PASS END=43047094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:35:0,92,1256:0,92,255:40,0 chr1 43047095 . C . PASS END=43047185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,117,1755:0,122,255:40,0 chr1 43054992 . G . PASS END=43054993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:37:0,96,1440:0,97,255:32,0 chr1 43054994 . A . PASS END=43054994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 43054995 . A . PASS END=43054996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:37:0,84,1288:0,84,255:36,0 chr1 43054997 . T . PASS END=43055000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:68:39:0,68,1276:0,68,255:37,0 chr1 43055001 . A . PASS END=43055009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:40:0,82,1435:0,82,255:40,0 chr1 43055010 . C . PASS END=43055010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:39,0 chr1 43055011 . G . PASS END=43055117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:80:45:0,80,1515:0,80,255:40,0 chr1 43055118 . T . PASS END=43055153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,127,255:40,0 chr1 43055154 . G . PASS END=43055154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:61:53:0,61,1444:0,61,255:40,0 chr1 43055155 . G . PASS END=43055155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:41:53:0,41,1150:0,41,255:38,0 chr1 43055156 . T . PASS END=43055166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,117,1578:0,119,255:40,0 chr1 43076649 . C . PASS END=43076761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:47:0,120,1800:0,127,255:40,0 chr1 43102908 . A . PASS END=43103049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:52:0,120,1800:0,140,255:40,0 chr1 43108144 . G . PASS END=43108150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1225:0,99,255:40,0 chr1 43108151 . C . PASS END=43108187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,119,1651:0,119,255:40,0 chr1 43108188 . G A, 251.65 PASS DP=68;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,41,0:0,27,0:202:289,205,0,389,389,389:255,204,0:0,0:2.5165e+02,2.0165e+02,0.0000e+00,3.8642e+02,4.2119e+02,3.8943e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,47,21:0,0,42,26 chr1 43108189 . C . PASS END=43108225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:68:0,120,1800:0,165,255:40,0 chr1 43108226 . A . PASS END=43108280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,158,255:40,0 chr1 43110364 . G . PASS END=43110478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:47:0,120,1800:0,141,255:40,0 chr1 43111806 . A . PASS END=43111806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 43111807 . A . PASS END=43111815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:26,0 chr1 43111816 . A . PASS END=43111821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1001:0,84,255:29,0 chr1 43111822 . C . PASS END=43111822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 43111823 . T . PASS END=43111977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1103:0,81,255:40,0 chr1 43111978 . C . PASS END=43111988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,87,255:25,0 chr1 43119047 . G . PASS END=43119193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,120,255:40,0 chr1 43119489 . T . PASS END=43119489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 43119490 . T . PASS END=43119499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:34,0 chr1 43119500 . A . PASS END=43119500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:32,0 chr1 43119501 . A . PASS END=43119679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:80:28:0,80,1169:0,80,255:40,0 chr1 43119680 . A . PASS END=43119680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 43119681 . C . PASS END=43119687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43119688 . T . PASS END=43119688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 43119689 . C . PASS END=43119689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 43119690 . A . PASS END=43119699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,891:0,64,255:26,0 chr1 43124118 . A . PASS END=43124131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,744:0,63,255:22,0 chr1 43124132 . T . PASS END=43124132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 43124133 . T . PASS END=43124136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 43124137 . G . PASS END=43124138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 43124139 . C . PASS END=43124170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,930:0,72,255:25,0 chr1 43124171 . T . PASS END=43124171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr1 43124172 . A . PASS END=43124178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 43124179 . G . PASS END=43124182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 43124183 . G . PASS END=43124183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 43124515 . G . PASS END=43124579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:37:0,88,1226:0,88,255:40,0 chr1 43124899 . G . PASS END=43125041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:64:0,120,1800:0,120,255:40,1 chr1 43125141 . A . PASS END=43125237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,100,1620:0,100,255:40,0 chr1 43126533 . G . PASS END=43126626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,101,1242:0,101,255:40,0 chr1 43130534 . G . PASS END=43130626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:42:0,93,1457:0,93,255:40,0 chr1 43131651 . G . PASS END=43131652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 43131653 . G A, 49.95 PASS DP=40;MQ=245.10;MQRankSum=4.791;ReadPosRankSum=3.386;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,19,0:0.487,0.000:39:9,11,0:11,8,0:48:85,0,50,680,705,1384:255,0,255:18,0:4.9947e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,7,12:9,11,11,8 chr1 43131654 . A . PASS END=43131690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:38:0,97,1291:0,97,255:40,0 chr1 43131691 . T . PASS END=43131738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,100,1684:0,100,255:40,0 chr1 43132218 . G . PASS END=43132258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,227,255:40,0 chr1 43133022 . A . PASS END=43133090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,134,255:40,0 chr1 43148237 . A . PASS END=43148281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,149:6,0 chr1 43148282 . G . PASS END=43148292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,149:3,0 chr1 43148293 . C . PASS END=43148294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:4,0 chr1 43148295 . T . LowGQ END=43148295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 43148296 . C . PASS END=43148311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 43148312 . A . LowGQ END=43148402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,22:0,0,33:3,0 chr1 43148658 . C . PASS END=43148667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 43148668 . A . PASS END=43148700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:9,0 chr1 43148701 . G . PASS END=43148715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr1 43148716 . C . PASS END=43148716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 43148717 . C T, 50.00 PASS DP=18;MQ=246.71;MQRankSum=3.510;ReadPosRankSum=1.999;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,10,0:0.556,0.000:18:3,5,0:5,5,0:47:85,0,47,185,185,185:255,0,255:9,0:5.0000e+01,9.1896e-05,4.9517e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,4,9,1:5,3,6,4 chr1 43148718 . G . PASS END=43148725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 43148726 . C . PASS END=43148735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 43148736 . A . PASS END=43148736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 43148737 . C . PASS END=43148742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 43148743 . T . PASS END=43148754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,775:0,50,255:19,0 chr1 43148755 . G . PASS END=43148755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 43148756 . T . PASS END=43148760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43148761 . G . PASS END=43148761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 43148762 . G . PASS END=43148766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 43148767 . C . PASS END=43148767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 43148768 . G . PASS END=43148771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 43148772 . C . PASS END=43148775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43148776 . C . PASS END=43148782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43148783 . C . PASS END=43148786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43148787 . G . PASS END=43148809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:22,0 chr1 43148810 . T . PASS END=43148810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 43148811 . C . PASS END=43148816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 43148817 . C . PASS END=43148817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 43148818 . T . PASS END=43148827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 43148828 . C . PASS END=43148828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 43148829 . G . PASS END=43148832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 43148833 . T . PASS END=43148835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 43148836 . G . PASS END=43148836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43148837 . C . PASS END=43148837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 43148838 . A . PASS END=43148842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 43148843 . C . PASS END=43148843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 43148844 . C . PASS END=43148849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,886:0,61,255:23,0 chr1 43148850 . T . PASS END=43148850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 43148851 . G . PASS END=43148852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 43148853 . G . PASS END=43148853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 43148854 . G . PASS END=43148857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 43148858 . G . PASS END=43148860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 43148861 . C . PASS END=43148862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 43148863 . C . PASS END=43148863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 43148864 . C . PASS END=43148868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43148869 . C . PASS END=43148870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:18,0 chr1 43148871 . G . PASS END=43148881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:23,0 chr1 43148882 . C . PASS END=43148882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:22,0 chr1 43148883 . C . PASS END=43148888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:25,0 chr1 43148889 . C . PASS END=43148894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1035:0,87,255:29,0 chr1 43148895 . A . PASS END=43148895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:27,0 chr1 43148896 . C . PASS END=43148898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 43148899 . A . PASS END=43148899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 43148900 . C . PASS END=43148902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 43148903 . A . PASS END=43148903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1048:0,54,255:29,0 chr1 43148904 . C . PASS END=43148955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1156:0,83,255:37,0 chr1 43148956 . A . PASS END=43148956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1136:0,70,255:34,0 chr1 43148957 . A . PASS END=43149019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1380:0,87,255:40,0 chr1 43149020 . T . PASS END=43149020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1418:0,76,255:36,0 chr1 43149021 . T . PASS END=43149036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,114,1460:0,120,255:40,0 chr1 43149074 . C . PASS END=43149137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:43:0,96,1522:0,96,255:40,0 chr1 43159161 . G . PASS END=43159194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,102,1554:0,102,255:40,0 chr1 43161870 . A . PASS END=43161903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1321:0,87,255:40,0 chr1 43161904 . T . PASS END=43161904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1386:0,77,255:40,0 chr1 43161905 . T . PASS END=43161959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,123,255:40,0 chr1 43162313 . G . PASS END=43162317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:18,0 chr1 43162318 . G . PASS END=43162318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 43162319 . G . PASS END=43162321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 43162322 . G . PASS END=43162322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 43162323 . C . PASS END=43162331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr1 43162332 . T . PASS END=43162334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 43162335 . C . PASS END=43162335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 43162336 . A . PASS END=43162337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:47:21:0,47,729:0,47,255:23,0 chr1 43162338 . G . PASS END=43162341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,864:0,64,255:26,0 chr1 43162342 . T . PASS END=43162342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 43162343 . G . PASS END=43162343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 43162344 . G . PASS END=43162353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:30,0 chr1 43162354 . A . PASS END=43162356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:30,0 chr1 43162357 . T . PASS END=43162358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 43162359 . A . PASS END=43162359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 43162360 . A . PASS END=43162360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 43162361 . G . PASS END=43162361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 43162362 . G . PASS END=43162370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1119:0,82,255:33,0 chr1 43162371 . A . PASS END=43162371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:31,0 chr1 43162372 . T . PASS END=43162440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:34,0 chr1 43162441 . T . PASS END=43162441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 43162442 . T . PASS END=43162449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 43162450 . T . PASS END=43162450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1097:0,60,255:28,0 chr1 43162451 . A . PASS END=43162461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 43162462 . G . PASS END=43162463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 43162464 . A . PASS END=43162467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 43162468 . G . PASS END=43162469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43162470 . A . PASS END=43162470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:25,0 chr1 43162471 . C . PASS END=43162473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 43162474 . G . PASS END=43162499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 43162500 . A . PASS END=43162501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 43162502 . G . PASS END=43162511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 43162512 . G . PASS END=43162514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 43162515 . G . PASS END=43162519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43162520 . T . PASS END=43162521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr1 43162522 . C . PASS END=43162523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43162524 . G . PASS END=43162524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 43162525 . C . PASS END=43162537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 43162538 . C . PASS END=43162543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 43162544 . T . PASS END=43162574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:18,0 chr1 43162575 . C . PASS END=43162575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 43162576 . A . PASS END=43162615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr1 43162851 . G . PASS END=43162851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 43162852 . G . PASS END=43162933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,101,1365:0,101,255:40,0 chr1 43166452 . G A, 0.06 DRAGENSnpHardQUAL DP=19;MQ=181.25;MQRankSum=-2.325;ReadPosRankSum=-1.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:17,2,0:0.105,0.000:19:6,0,0:11,2,0:18:17,0,50,71,600,672:20,0,255:16,0:6.4433e-02,1.8319e+01,7.1319e+01,8.9787e+01,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,5,2,0:9,8,0,2 chr1 43166453 . G . PASS END=43166453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43166454 . G . PASS END=43166458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 43166459 . C . PASS END=43166462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr1 43166463 . G . PASS END=43166463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 43166464 . C . PASS END=43166466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 43166467 . A . PASS END=43166467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 43166468 . A . PASS END=43166520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,823:0,62,255:26,0 chr1 43166521 . G . PASS END=43166522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43166523 . C . PASS END=43166527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43166528 . G . PASS END=43166537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 43166538 . C . PASS END=43166539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 43166540 . C . PASS END=43166555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1180:0,93,255:31,0 chr1 43166556 . G . PASS END=43166556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 43166557 . C . PASS END=43166566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr1 43166567 . A . PASS END=43166567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 43166568 . A . PASS END=43166588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:31,0 chr1 43166589 . A . PASS END=43166599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,969:0,73,255:26,0 chr1 43166600 . C . PASS END=43166600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 43166601 . C . PASS END=43166602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 43166603 . C . PASS END=43166603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43166604 . A . PASS END=43166605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 43166606 . G . PASS END=43166608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43166609 . G . PASS END=43166609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr1 43166610 . G . PASS END=43166615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 43166616 . A . PASS END=43166616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 43166617 . G . PASS END=43166617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 43166618 . A . PASS END=43166618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,986:0,43,255:28,0 chr1 43166619 . C . PASS END=43166629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1155:0,90,255:30,0 chr1 43166630 . G . PASS END=43166630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:27,0 chr1 43166631 . A . PASS END=43166646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 43166647 . T . PASS END=43166647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 43166648 . T . PASS END=43166652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 43166653 . C . PASS END=43166660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:22,0 chr1 43166661 . A . PASS END=43166673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,50,255:19,0 chr1 43166674 . C . PASS END=43166680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:14:0,30,450:0,41,255:13,0 chr1 43166681 . G . PASS END=43166686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:13:0,21,315:0,39,255:8,0 chr1 43199059 . T . PASS END=43199059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 43199136 . A . PASS END=43199136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43199274 . C . PASS END=43199274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43199329 . T . PASS END=43199329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 43199400 . G . PASS END=43199400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 43199404 . C . PASS END=43199404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 43199421 . A . PASS END=43199421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 43199445 . C . PASS END=43199445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 43199585 . G . PASS END=43199585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 43199684 . C . PASS END=43199685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 43199749 . G . PASS END=43199749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1410:0,98,255:35,0 chr1 43199890 . G . PASS END=43199890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 43199957 . G . PASS END=43199957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 43200022 . C . PASS END=43200022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 43200115 . C . PASS END=43200115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43200118 . G . PASS END=43200118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43200133 . G . PASS END=43200133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 43200159 . C . PASS END=43200159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 43200210 . G . PASS END=43200210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 43200221 . C . PASS END=43200221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,84,255:18,0 chr1 43200234 . C . PASS END=43200234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 43200266 . G . PASS END=43200266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 43200472 . G . PASS END=43200472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 43200500 . G . PASS END=43200500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43200580 . G . PASS END=43200580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 43200638 . G . PASS END=43200638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 43200712 . C . PASS END=43200712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 43200738 . C . PASS END=43200738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43200757 . T . PASS END=43200761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr1 43200762 . C . PASS END=43200762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:28,0 chr1 43200763 . A . PASS END=43200763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 43200764 . C . PASS END=43200764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 43200765 . C . PASS END=43200766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 43200767 . A . PASS END=43200767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1058:0,93,255:31,0 chr1 43200768 . G . PASS END=43200768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 43200769 . G . PASS END=43200774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:33,0 chr1 43200775 . C . PASS END=43200775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1125:0,55,255:32,0 chr1 43200776 . T . PASS END=43200777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 43200778 . G . PASS END=43200778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr1 43200779 . G . PASS END=43200779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 43200780 . C . PASS END=43200780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1152:0,66,255:33,0 chr1 43200781 . G . PASS END=43200785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:34,0 chr1 43200786 . C . PASS END=43200786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:31,0 chr1 43200787 . G . PASS END=43200805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1134:0,85,255:34,0 chr1 43201433 . C . PASS END=43201435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 43201436 . T . PASS END=43201436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 43201437 . G . PASS END=43201437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 43201438 . C . PASS END=43201441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 43201442 . T . PASS END=43201454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 43201455 . T . PASS END=43201455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 43201456 . G . PASS END=43201466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 43201467 . G . PASS END=43201479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 43201480 . C . LowGQ END=43201480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr1 43201481 . T . PASS END=43201503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 43201504 . C . PASS END=43201547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,512:0,42,255:19,0 chr1 43201548 . C . PASS END=43201555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 43201556 . C . PASS END=43201557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43201558 . G . PASS END=43201618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,815:0,61,255:25,0 chr1 43201619 . A . PASS END=43201637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 43201638 . G . PASS END=43201638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 43201639 . C . PASS END=43201645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43201646 . G . PASS END=43201646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 43201647 . C . PASS END=43201652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:16,0 chr1 43201653 . C . PASS END=43201684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,404:0,33,255:12,0 chr1 43201685 . C . PASS END=43201685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 43201686 . T . PASS END=43201701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:12,0 chr1 43203900 . C . PASS END=43203924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,906:0,81,255:31,0 chr1 43203925 . T . PASS END=43203925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 43203926 . G . PASS END=43203929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 43203930 . A . PASS END=43203930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 43203931 . A . PASS END=43203939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1078:0,90,255:31,0 chr1 43203940 . T . PASS END=43203940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 43203941 . C . PASS END=43203945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 43203946 . G . PASS END=43203948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 43203949 . T . PASS END=43203953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 43203954 . T . PASS END=43203958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 43203959 . C . PASS END=43203977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1054:0,87,255:29,0 chr1 43203978 . C . PASS END=43203980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43203981 . A . PASS END=43203984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 43204092 . C . PASS END=43204250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:40:0,90,1418:0,90,255:40,0 chr1 43204251 . T . PASS END=43204256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:26,0 chr1 43205512 . C . PASS END=43205634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,574:0,41,255:19,0 chr1 43205635 . A . PASS END=43205636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43205637 . G . PASS END=43205641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 43205642 . C . PASS END=43205645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 43205646 . C . PASS END=43205646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 43205647 . A . PASS END=43205660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 43205661 . G . PASS END=43205661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 43205662 . T . PASS END=43205675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 43205676 . C . PASS END=43205693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 43205694 . G . PASS END=43205694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43205695 . C . PASS END=43205695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 43205696 . C . PASS END=43205717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr1 43205718 . A . PASS END=43205718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 43205719 . G . PASS END=43205722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43205723 . T . PASS END=43205723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 43205724 . G . PASS END=43205730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,736:0,61,255:22,0 chr1 43205731 . C . PASS END=43205731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 43205732 . C . PASS END=43205733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 43205734 . T . PASS END=43205734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 43205879 . G . PASS END=43205880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 43205884 . G . PASS END=43205884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43212106 . G . PASS END=43212106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 43212252 . G . PASS END=43212252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 43212291 . G . PASS END=43212291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43212368 . T . PASS END=43212393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1111:0,80,255:33,0 chr1 43212394 . C . PASS END=43212396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:30,0 chr1 43212397 . T . PASS END=43212397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:29,0 chr1 43212398 . G . PASS END=43212398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 43212399 . C . PASS END=43212399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 43212400 . C . PASS END=43212430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1271:0,81,255:40,0 chr1 43212431 . A G, 172.93 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,18,0:0,24,0:123:211,126,0,311,311,311:255,126,0:0,0:1.7293e+02,1.2293e+02,0.0000e+00,3.0770e+02,3.4247e+02,3.1071e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,28,14:0,0,18,24 chr1 43212432 . C . PASS END=43212468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,110,1565:0,110,255:40,0 chr1 43212469 . C . PASS END=43212523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:42:0,91,1566:0,91,255:40,0 chr1 43212583 . T . PASS END=43212585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 43212586 . G . PASS END=43212606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 43212607 . A . PASS END=43212607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 43212608 . G . PASS END=43212618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 43212619 . T . PASS END=43212619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 43212620 . A . PASS END=43212672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1213:0,90,255:36,0 chr1 43212673 . A . PASS END=43212673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 43212674 . G . PASS END=43212685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:30,0 chr1 43212686 . C . PASS END=43212686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:29,0 chr1 43212687 . C . PASS END=43212736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1103:0,80,255:33,0 chr1 43212737 . C . PASS END=43212745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,1025:0,73,255:26,0 chr1 43212746 . A . PASS END=43212758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 43212759 . C . PASS END=43212767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1078:0,74,255:26,0 chr1 43212768 . G . PASS END=43212768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 43212769 . G . PASS END=43212770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,87,255:25,0 chr1 43212771 . G . PASS END=43212771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:25,0 chr1 43212772 . G . PASS END=43212780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:29:0,76,1072:0,76,255:26,0 chr1 43212781 . A . PASS END=43212787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43212788 . C . PASS END=43212788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 43212789 . A . PASS END=43212798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 43212799 . G . PASS END=43212799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:26,0 chr1 43212800 . G . PASS END=43212801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 43212802 . G . PASS END=43212807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1034:0,82,255:28,0 chr1 43212808 . G . PASS END=43212809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr1 43212810 . T . PASS END=43212813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43212814 . G . PASS END=43212856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,902:0,62,255:26,0 chr1 43212857 . T . PASS END=43212867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr1 43212868 . A . PASS END=43212868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 43212869 . A . PASS END=43212870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43212871 . G . PASS END=43212871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 43212872 . G . PASS END=43212875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43212876 . A . PASS END=43212876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 43212877 . C . PASS END=43212878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43212879 . A . PASS END=43212879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 43212880 . A . PASS END=43212887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43212888 . C . PASS END=43212889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43212890 . G . PASS END=43212892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 43212893 . A . PASS END=43212896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 43212897 . G . PASS END=43212908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:31,0 chr1 43212909 . A . PASS END=43212909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr1 43212910 . C . PASS END=43212917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1161:0,80,255:29,0 chr1 43212918 . T . PASS END=43212918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:27,0 chr1 43212919 . C . PASS END=43212928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 43212929 . C . PASS END=43212929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43212930 . G . PASS END=43212933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 43212934 . T . PASS END=43212934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr1 43212935 . G . PASS END=43212936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:31,0 chr1 43212937 . T . PASS END=43212937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,951:0,65,255:29,0 chr1 43212938 . C . PASS END=43212940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:31,0 chr1 43212941 . A . PASS END=43212944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:33:0,64,1143:0,64,255:30,0 chr1 43212945 . G . PASS END=43212946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:31,0 chr1 43212947 . T . PASS END=43212947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1147:0,52,255:29,0 chr1 43212948 . C . PASS END=43212949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:31,0 chr1 43212950 . C . PASS END=43212950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:31,0 chr1 43212951 . T . PASS END=43212954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1141:0,82,255:33,0 chr1 43212955 . T . PASS END=43212956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:33,0 chr1 43212957 . G . PASS END=43212957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1278:0,89,255:32,0 chr1 43212958 . A . PASS END=43212958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:31,0 chr1 43212959 . G . PASS END=43212963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1241:0,89,255:34,0 chr1 43212964 . C . PASS END=43212964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:32,0 chr1 43212965 . A . PASS END=43212973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:89:35:0,89,1050:0,89,255:33,0 chr1 43212974 . C . PASS END=43212976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:32,0 chr1 43212977 . A . PASS END=43212980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1213:0,88,255:33,0 chr1 43212981 . C . PASS END=43212981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:31,0 chr1 43212982 . G . PASS END=43212982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 43212983 . A . PASS END=43212983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:30,0 chr1 43212984 . T . PASS END=43212986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1264:0,92,255:32,0 chr1 43212987 . C . PASS END=43212987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr1 43212988 . A . PASS END=43212992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1227:0,91,255:34,0 chr1 43212993 . G . PASS END=43212993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr1 43212994 . C . PASS END=43213001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1217:0,89,255:35,0 chr1 43213002 . T . PASS END=43213002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:33,0 chr1 43213003 . G . PASS END=43213014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1286:0,81,255:36,0 chr1 43213015 . C . PASS END=43213015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1339:0,71,255:36,0 chr1 43213016 . A . PASS END=43213030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:39:0,81,1281:0,81,255:39,0 chr1 43213031 . T . PASS END=43213031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr1 43213032 . C . PASS END=43213035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1345:0,100,255:39,0 chr1 43213036 . G . PASS END=43213036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1316:0,68,255:34,0 chr1 43213037 . C . PASS END=43213056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:80:36:0,80,1128:0,80,255:37,0 chr1 43213057 . T . PASS END=43213057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1067:0,66,255:32,0 chr1 43213058 . C . PASS END=43213059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1231:0,89,255:32,0 chr1 43213060 . T . PASS END=43213060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:30,0 chr1 43213061 . C . PASS END=43213070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1194:0,86,255:33,0 chr1 43213071 . G . PASS END=43213083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:29:0,69,1035:0,70,255:25,0 chr1 43213389 . C . PASS END=43213389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 43213394 . C . PASS END=43213461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,143,255:40,0 chr1 43213462 . G . PASS END=43213469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,152,255:40,0 chr1 43213471 . T . PASS END=43213471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 43213866 . C . PASS END=43213866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 43213871 . C . PASS END=43213882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1084:0,87,255:29,0 chr1 43213883 . A . PASS END=43213883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 43213884 . A . PASS END=43213911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1225:0,87,255:37,0 chr1 43213912 . C . PASS END=43213912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr1 43213913 . A . PASS END=43213940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1333:0,84,255:39,0 chr1 43213941 . T . PASS END=43213941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1303:0,75,255:32,0 chr1 43213942 . G . PASS END=43213958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:31,0 chr1 43213959 . G . PASS END=43213988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,840:0,61,255:24,0 chr1 43213992 . G . PASS END=43213993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 43215853 . C . PASS END=43215853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 43215857 . C . PASS END=43215857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 43215858 . T . PASS END=43215866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:28,0 chr1 43215867 . A . PASS END=43215867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 43215868 . G . PASS END=43215971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:80:30:0,80,1086:0,80,255:40,0 chr1 43215972 . G . PASS END=43215979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 43215980 . G . PASS END=43215984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 43215985 . G . PASS END=43215999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 43216000 . T . PASS END=43216000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr1 43216001 . G . PASS END=43216007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr1 43217942 . T . PASS END=43217942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 43217944 . C . PASS END=43218040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,140,255:40,0 chr1 43218203 . C . PASS END=43218203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 43218207 . C . PASS END=43218320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:38:0,81,1215:0,110,255:40,0 chr1 43218321 . A . PASS END=43218323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:34:0,78,1170:0,102,255:26,0 chr1 43218324 . G . PASS END=43218329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 43218330 . G . PASS END=43218336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 43220540 . C . PASS END=43220661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:97:45:0,97,1635:0,97,255:40,0 chr1 43220836 . T . PASS END=43220888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,173,255:40,0 chr1 43220890 . T . PASS END=43220890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,202,255:40,0 chr1 43221205 . G . PASS END=43221205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 43221210 . C . PASS END=43221210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 43221213 . G . PASS END=43221213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,169,255:40,0 chr1 43221219 . C . PASS END=43221308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,117,1755:0,144,255:40,0 chr1 43221314 . G . PASS END=43221314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr1 43222072 . C . PASS END=43222126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,105,1605:0,105,255:40,0 chr1 43223453 . C . PASS END=43223593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:36:0,87,1242:0,87,255:40,0 chr1 43224522 . C . PASS END=43224647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1202:0,81,255:40,0 chr1 43224648 . T . PASS END=43224654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 43224659 . A . PASS END=43224659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 43224867 . C . PASS END=43224867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 43224872 . C . PASS END=43224911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,771:0,66,255:26,0 chr1 43224912 . G . PASS END=43224917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 43224918 . G . PASS END=43224969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,836:0,64,255:26,0 chr1 43224970 . A . PASS END=43224970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 43224971 . C . PASS END=43225005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,907:0,65,255:26,0 chr1 43225006 . A . PASS END=43225006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 43225007 . C . PASS END=43225016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 43225017 . T . PASS END=43225017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr1 43225018 . G . PASS END=43225025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 43225026 . C . PASS END=43225026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 43225027 . T . PASS END=43225027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 43225028 . C . PASS END=43225059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,544:0,48,255:17,0 chr1 43225060 . T . PASS END=43225060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 43225061 . G . PASS END=43225061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 43225072 . G . PASS END=43225072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 43227983 . G . PASS END=43227983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:17,0 chr1 43227990 . T . PASS END=43227990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 43227994 . C . PASS END=43227994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr1 43227995 . A . PASS END=43227995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 43227996 . T . PASS END=43227996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 43227997 . A . PASS END=43227999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 43228000 . G . PASS END=43228000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:31,0 chr1 43228001 . G . PASS END=43228141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1124:0,83,255:40,0 chr1 43228142 . T . PASS END=43228142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1178:0,47,255:28,0 chr1 43228143 . T . PASS END=43228146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:30,0 chr1 43232178 . C . PASS END=43232188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 43232189 . C . PASS END=43232189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 43232190 . G . PASS END=43232201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 43232202 . G . PASS END=43232231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:12,0 chr1 43232232 . C . LowGQ END=43232232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 43232233 . T . PASS END=43232248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 43232249 . G . PASS END=43232261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 43232262 . C . PASS END=43232287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,459:0,39,255:13,0 chr1 43232288 . A . PASS END=43232288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 43232289 . G . PASS END=43232308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 43232309 . C . PASS END=43232315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 43232316 . G . PASS END=43232346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 43232347 . G . PASS END=43232349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 43232350 . G . PASS END=43232366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 43232367 . G . PASS END=43232370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 43232371 . C . PASS END=43232372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 43232373 . G . PASS END=43232376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 43232377 . G . PASS END=43232395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 43232396 . A . PASS END=43232396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 43232397 . G . PASS END=43232407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 43232408 . A . PASS END=43232408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 43232409 . C . PASS END=43232415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 43232416 . C . PASS END=43232416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 43232417 . G . PASS END=43232423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 43232424 . C . PASS END=43232430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 43232431 . A . PASS END=43232432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 43232433 . G . PASS END=43232433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:10,0 chr1 43232434 . G . PASS END=43232434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 43232435 . C . PASS END=43232435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 43232436 . G . PASS END=43232436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 43232437 . C . PASS END=43232437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 43232438 . G . PASS END=43232443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 43232444 . C . PASS END=43232445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 43232446 . G . PASS END=43232469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr1 43232470 . A . PASS END=43232470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 43232471 . T . PASS END=43232493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,459:0,36,255:13,0 chr1 43232494 . T . PASS END=43232494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 43232495 . C . PASS END=43232523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 43232524 . G . PASS END=43232526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 43232527 . A . PASS END=43232528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:12,0 chr1 43232529 . G . PASS END=43232529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 43232530 . A . PASS END=43232534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,37,255:14,0 chr1 43232535 . A . PASS END=43232536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 43232537 . C . PASS END=43232537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 43232538 . A . PASS END=43232544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 43232545 . A . PASS END=43232545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 43232546 . C . PASS END=43232552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:15,0 chr1 43232553 . C . PASS END=43232553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 43232554 . C . PASS END=43232561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:17,0 chr1 43232562 . C . PASS END=43232562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 43232563 . T . PASS END=43232576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:18,0 chr1 43232577 . G . PASS END=43232577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 43232578 . G . PASS END=43232580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 43232581 . T . PASS END=43232581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,568:0,23,255:16,0 chr1 43232582 . G . PASS END=43232594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 43232595 . C . PASS END=43232595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 43232596 . A . PASS END=43232605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:18,0 chr1 43232606 . G . PASS END=43232606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 43232607 . C . PASS END=43232608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 43232609 . G . PASS END=43232626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,743:0,60,255:23,0 chr1 43232627 . A . PASS END=43232627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,695:0,55,255:22,0 chr1 43232628 . C . PASS END=43232641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,803:0,69,255:24,0 chr1 43232642 . T . PASS END=43232642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 43232671 . G . PASS END=43232671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43232687 . G . PASS END=43232687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 43232699 . C . PASS END=43232699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43232737 . T . PASS END=43232737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 43232748 . C . PASS END=43232748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 43232983 . A . PASS END=43232992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 43232993 . C . PASS END=43233006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr1 43233007 . C . PASS END=43233007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 43233008 . G . PASS END=43233019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:29,0 chr1 43233020 . T . PASS END=43233021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 43233022 . C . PASS END=43233034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 43233035 . G . PASS END=43233035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 43233036 . A . PASS END=43233040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 43233041 . C . PASS END=43233041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 43233042 . G . PASS END=43233043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 43233044 . C . PASS END=43233044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 43233045 . A . PASS END=43233048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43233049 . G . PASS END=43233072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,930:0,62,255:27,0 chr1 43233073 . G . PASS END=43233075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 43233076 . A . PASS END=43233082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 43233083 . A . PASS END=43233083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 43233084 . G . PASS END=43233084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 43233085 . G . PASS END=43233085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 43233086 . G . PASS END=43233089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 43233090 . A . PASS END=43233092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 43233093 . C . PASS END=43233095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43233096 . C . PASS END=43233115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 43233116 . T . PASS END=43233118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 43233119 . G . PASS END=43233122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 43233123 . T . PASS END=43233133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 43233134 . C . PASS END=43233137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43233138 . C . PASS END=43233138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 43233139 . G . PASS END=43233141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 43233142 . G . PASS END=43233142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 43233143 . G . PASS END=43233147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 43233148 . T . PASS END=43233149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 43233150 . A . PASS END=43233156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,531:0,48,255:16,0 chr1 43233157 . G . PASS END=43233157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 43233158 . T . PASS END=43233171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 43233172 . T . PASS END=43233172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 43233173 . G . PASS END=43233180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 43233181 . A . PASS END=43233181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 43233182 . G . PASS END=43233187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43233188 . G . PASS END=43233188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:13,0 chr1 43233189 . T . PASS END=43233189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43233190 . G . PASS END=43233195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 43233196 . C . PASS END=43233207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 43233208 . C . PASS END=43233216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,540:0,31,255:13,0 chr1 43233217 . G . PASS END=43233217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 43233218 . G . PASS END=43233224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:13,0 chr1 43233225 . T . PASS END=43233226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 43233227 . A . PASS END=43233227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:16,0 chr1 43233228 . G . PASS END=43233228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 43233229 . C . PASS END=43233230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:15,0 chr1 43233231 . C . PASS END=43233231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,558:0,2,255:15,0 chr1 43233232 . C . PASS END=43233237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:19,0 chr1 43233238 . C . PASS END=43233240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43233241 . C . PASS END=43233245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 43233246 . G . PASS END=43233247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 43233248 . G . PASS END=43233252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43233253 . G . PASS END=43233253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 43233254 . G . PASS END=43233254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43233255 . A . PASS END=43233255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 43233256 . C . PASS END=43233259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43233260 . T . PASS END=43233261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 43233262 . A . PASS END=43233262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43233263 . G . PASS END=43233263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 43233264 . A . PASS END=43233266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43233267 . T . PASS END=43233267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 43233268 . C . PASS END=43233268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43233269 . G . PASS END=43233269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:20,0 chr1 43233270 . T . PASS END=43233270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,711:0,47,255:20,0 chr1 43233271 . G . PASS END=43233271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:20,0 chr1 43233272 . G . PASS END=43233272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43233273 . C . PASS END=43233273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:17,0 chr1 43233274 . G . PASS END=43233275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 43233276 . T . PASS END=43233276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:18,0 chr1 43233277 . C . PASS END=43233277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 43233278 . G . PASS END=43233278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,689:0,16,255:17,0 chr1 43233279 . C . PASS END=43233282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:16,0 chr1 43233283 . G . PASS END=43233283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:16,0 chr1 43233284 . C . PASS END=43233284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr1 43233285 . A . PASS END=43233285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:15,0 chr1 43233286 . G . PASS END=43233286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,604:0,2,255:15,0 chr1 43233287 . G . PASS END=43233295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,630:0,41,255:15,0 chr1 43239217 . T . PASS END=43239320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,147,255:40,0 chr1 43240408 . G . PASS END=43240539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:43:0,120,1800:0,125,255:40,0 chr1 43240880 . G . PASS END=43240887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr1 43240888 . G . PASS END=43240893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,815:0,63,255:22,0 chr1 43240894 . T . PASS END=43240895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 43240896 . G . PASS END=43240907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,911:0,72,255:26,0 chr1 43240908 . T . PASS END=43240912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 43240913 . G . PASS END=43240917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:26,0 chr1 43240918 . C . PASS END=43240923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 43240924 . A . PASS END=43240924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,892:0,79,255:30,0 chr1 43240925 . C . PASS END=43240944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1205:0,96,255:36,0 chr1 43240945 . G . PASS END=43240945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 43240946 . A . PASS END=43241046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,99,1426:0,111,255:40,0 chr1 43241047 . C . PASS END=43241047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:32,0 chr1 43241048 . C . PASS END=43241065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:33,0 chr1 43250726 . A . PASS END=43250728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 43250729 . C . PASS END=43250729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 43250730 . C . PASS END=43250735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 43250736 . C . PASS END=43250738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,77,255:24,0 chr1 43250739 . A . PASS END=43250739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:22,0 chr1 43250740 . G . PASS END=43250753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,908:0,61,255:25,0 chr1 43255104 . A . PASS END=43255114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 43255115 . G . PASS END=43255156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1217:0,86,255:34,0 chr1 43255474 . T . PASS END=43255605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,120,1800:0,134,255:40,0 chr1 43258476 . G . PASS END=43258573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1302:0,87,255:40,0 chr1 43259272 . G . PASS END=43259415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,99,1485:0,114,255:40,0 chr1 43260084 . G . PASS END=43260103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,860:0,62,255:26,0 chr1 43260104 . G . PASS END=43260106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1266:0,105,255:35,0 chr1 43260107 . C . PASS END=43260260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:88:34:0,88,1135:0,88,255:40,0 chr1 43260261 . G . PASS END=43260261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:31,0 chr1 43260262 . G . PASS END=43260272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:32,0 chr1 43260273 . T . PASS END=43260273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,981:0,68,255:29,0 chr1 43260274 . T . PASS END=43260283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1139:0,80,255:30,0 chr1 43260284 . G . PASS END=43260284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 43263769 . G . PASS END=43263896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:42:0,96,1551:0,96,255:40,0 chr1 43273085 . T . PASS END=43273088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1299:0,108,255:36,0 chr1 43273089 . T . PASS END=43273089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1242:0,77,255:35,0 chr1 43273090 . C . PASS END=43273164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1166:0,95,255:40,0 chr1 43273165 . C . PASS END=43273171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 43282102 . C . PASS END=43282215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:41:0,87,1305:0,102,255:40,0 chr1 43296120 . A . PASS END=43296155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,126,255:40,0 chr1 43296156 . G . PASS END=43296204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,117,1755:0,137,255:40,0 chr1 43296439 . G . PASS END=43296464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,880:0,69,255:26,0 chr1 43296465 . C . PASS END=43296465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 43296466 . A . PASS END=43296481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:26:0,71,1069:0,71,255:26,0 chr1 43296482 . G . PASS END=43296489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 43296490 . C . PASS END=43296490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr1 43296491 . C . PASS END=43296526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1095:0,80,255:34,0 chr1 43296527 . G . PASS END=43296527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 43296528 . G . PASS END=43296542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1266:0,91,255:32,0 chr1 43296543 . A . PASS END=43296543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 43296544 . G . PASS END=43296545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 43296546 . T . PASS END=43296546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 43296547 . G . PASS END=43296557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 43296558 . C . PASS END=43296558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 43296559 . C . PASS END=43296567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 43296568 . A . PASS END=43296569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 43296570 . C . PASS END=43296603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:31,0 chr1 43296604 . A . PASS END=43296604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43296605 . G . PASS END=43296609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 43296610 . A . PASS END=43296632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:26:0,71,1008:0,71,255:26,0 chr1 43296633 . T . PASS END=43296636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 43296637 . A . PASS END=43296637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 43296638 . G . PASS END=43296645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:30,0 chr1 43296646 . C . PASS END=43296647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 43296648 . G . PASS END=43296657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:32,0 chr1 43296658 . G . PASS END=43296658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 43296659 . A . PASS END=43296717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:34:0,80,1215:0,80,255:38,0 chr1 43296718 . G . PASS END=43296718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:29,0 chr1 43296719 . G . PASS END=43296758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1101:0,80,255:33,0 chr1 43296759 . G . PASS END=43296759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:27,0 chr1 43296760 . A . PASS END=43296760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 43296761 . G . PASS END=43296761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43296762 . G . PASS END=43296773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 43296774 . C . PASS END=43296782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:22:0,51,723:0,52,255:19,0 chr1 43296783 . G . PASS END=43296783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:16,0 chr1 43296784 . C . PASS END=43296786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,720:0,47,255:17,0 chr1 43300709 . C . PASS END=43300725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,707:0,60,255:26,0 chr1 43300726 . C . PASS END=43300731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:30,0 chr1 43300732 . C . PASS END=43300732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 43300733 . C . PASS END=43300745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1172:0,93,255:31,0 chr1 43300746 . T . PASS END=43300746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 43300747 . C . PASS END=43300773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1123:0,80,255:32,0 chr1 43300774 . C . PASS END=43300774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 43300775 . T . PASS END=43300776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 43300777 . C . PASS END=43300779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1009:0,73,255:26,0 chr1 43300780 . A . PASS END=43300780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43300781 . T . PASS END=43300796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,856:0,64,255:26,0 chr1 43300797 . C . PASS END=43300798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43300799 . T . PASS END=43300825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,925:0,65,255:26,0 chr1 43301403 . A . PASS END=43301409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 43301410 . T . PASS END=43301410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 43301411 . C . PASS END=43301411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 43301412 . T . PASS END=43301412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 43301413 . C . PASS END=43301427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1025:0,84,255:31,0 chr1 43301428 . G . PASS END=43301435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1123:0,77,255:27,0 chr1 43302829 . A . PASS END=43302861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:93:0,120,1800:0,255,255:40,0 chr1 43304572 . G . PASS END=43304592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,158,255:40,0 chr1 43305704 . A . PASS END=43305724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,114,1800:0,114,255:40,0 chr1 43305823 . A . PASS END=43305849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,112,1751:0,112,255:40,0 chr1 43305941 . G . PASS END=43305967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:51:0,120,1800:0,125,255:40,0 chr1 43308188 . T . PASS END=43308190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,986:0,78,255:26,0 chr1 43308191 . C . PASS END=43308446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,972:0,81,255:40,0 chr1 43308447 . T . PASS END=43308483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1399:0,104,255:39,0 chr1 43308484 . A . LowGQ END=43308484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,15:40:0:40:0,0,611:143,0,255:20,0 chr1 43308485 . A . PASS END=43308485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 43308486 . T . PASS END=43308486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1086:0,61,255:33,0 chr1 43308487 . G . PASS END=43308488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:31:38:0,31,924:0,31,255:29,0 chr1 43308489 . G . PASS END=43308490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:43:0,95,1229:0,95,255:39,0 chr1 43308491 . A . PASS END=43308491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:46:43:0,46,1181:0,46,255:34,0 chr1 43308492 . T . PASS END=43308492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 43308493 . G . PASS END=43308493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,7:43:12:43:0,12,983:0,12,255:30,0 chr1 43308494 . A . PASS END=43308495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:43:0,95,1227:0,95,255:35,0 chr1 43308496 . G . PASS END=43308496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:45:43:0,45,1077:0,45,255:32,0 chr1 43308497 . C . PASS END=43308497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,108,1620:0,109,255:35,0 chr1 43308498 . T . PASS END=43308498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:53:42:0,53,1052:0,53,255:35,0 chr1 43308499 . C . PASS END=43308500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1299:0,90,255:37,0 chr1 43308501 . C . PASS END=43308501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1124:0,59,255:34,0 chr1 43308502 . A . PASS END=43308504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:43:0,82,1368:0,82,255:38,0 chr1 43308505 . T . PASS END=43308506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:23:41:0,23,1049:0,23,255:32,0 chr1 43308507 . C . PASS END=43308509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,111,1665:0,123,255:38,0 chr1 43308510 . G . LowGQ END=43308510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:0:42:0,0,1103:10,0,255:33,0 chr1 43308511 . C . PASS END=43308512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:92:42:0,92,1295:0,92,255:38,0 chr1 43308513 . G . PASS END=43308513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:37:42:0,37,1213:0,37,255:32,0 chr1 43308514 . A . PASS END=43308514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1291:0,79,255:35,0 chr1 43308515 . C . PASS END=43308516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:42:0,96,1429:0,96,255:38,0 chr1 43308517 . T . PASS END=43308517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:6:42:0,6,1097:0,6,255:34,0 chr1 43308518 . C . PASS END=43308518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:26:43:0,26,1236:0,26,255:36,0 chr1 43308519 . C . PASS END=43308519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1529:0,90,255:39,0 chr1 43308520 . T . LowGQ END=43308520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:0:43:0,0,1127:15,0,255:34,0 chr1 43308521 . T . PASS END=43308521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 43308522 . C . PASS END=43308522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:28:41:0,28,1176:0,28,255:34,0 chr1 43308523 . C . PASS END=43308523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 43308524 . G . PASS END=43308524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1252:0,73,255:36,0 chr1 43308525 . C . PASS END=43308526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1391:0,106,255:39,0 chr1 43308527 . T . LowGQ END=43308527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,8:41:0:41:0,0,1022:24,0,255:31,0 chr1 43308528 . T . PASS END=43308528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 43308529 . A . PASS END=43308529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1337:0,76,255:37,0 chr1 43308530 . A . PASS END=43308533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:41:0,87,1355:0,87,255:39,0 chr1 43308534 . G . PASS END=43308534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1228:0,73,255:34,0 chr1 43308535 . C . PASS END=43308536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 43308537 . T . PASS END=43308537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:27:44:0,27,1264:0,27,255:35,0 chr1 43308538 . C . PASS END=43308541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:44:0,82,1402:0,82,255:40,0 chr1 43308542 . G . PASS END=43308542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:12:43:0,12,1223:0,12,255:36,0 chr1 43308543 . G . PASS END=43308543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 43308544 . T . PASS END=43308544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:37:42:0,37,1235:0,37,255:35,0 chr1 43308545 . G . PASS END=43308552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1415:0,109,255:39,0 chr1 43308553 . A . PASS END=43308553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1344:0,57,255:35,0 chr1 43308554 . T . PASS END=43308557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,103,1374:0,103,255:40,0 chr1 43308558 . C . PASS END=43308558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,7:43:13:43:0,13,1124:0,13,255:35,0 chr1 43308559 . C . PASS END=43308559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1582:0,113,255:39,0 chr1 43308560 . T . PASS END=43308560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1275:0,54,255:37,0 chr1 43308561 . G . PASS END=43308562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:41:0,93,1390:0,93,255:39,0 chr1 43308563 . A . PASS END=43308563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1337:0,76,255:38,0 chr1 43308564 . C . PASS END=43308564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1434:0,90,255:37,0 chr1 43308565 . T . PASS END=43308565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1313:0,68,255:37,0 chr1 43308566 . A . PASS END=43308567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,99,1532:0,99,255:40,0 chr1 43308568 . G . PASS END=43308568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:17:46:0,17,1369:0,17,255:38,0 chr1 43308569 . A . PASS END=43308582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:86:47:0,86,1540:0,86,255:40,0 chr1 43308583 . T . PASS END=43308583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:39:50:0,39,1545:0,39,255:40,0 chr1 43308584 . C . PASS END=43308765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1177:0,80,255:40,0 chr1 43308766 . C . PASS END=43308781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,945:0,62,255:25,0 chr1 43308782 . T . PASS END=43308784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 43308785 . C . PASS END=43308787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 43308788 . T . PASS END=43308799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr1 43308800 . C . PASS END=43308800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43308801 . T . PASS END=43308803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 43308804 . T . PASS END=43308805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43308806 . T . PASS END=43308806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43308807 . A . PASS END=43308807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43308808 . C . PASS END=43308812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 43308813 . C . PASS END=43308831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 43308832 . A . PASS END=43308835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 43308836 . A . PASS END=43308836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:19,0 chr1 43308837 . T . PASS END=43308837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:18,0 chr1 43308838 . A . PASS END=43308869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:14:0,41,543:0,41,255:19,0 chr1 43308870 . A . PASS END=43308894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 43308895 . T . PASS END=43308895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,350:0,22,255:12,0 chr1 43308896 . C . PASS END=43308899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 43308900 . T . PASS END=43308900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 43308901 . T . PASS END=43308903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 43315013 . A . PASS END=43315084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:56:0,120,1800:0,152,255:40,0 chr1 43315330 . A . PASS END=43315413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,142,255:40,0 chr1 43316358 . A . PASS END=43316414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,156,255:40,0 chr1 43316606 . T . PASS END=43316629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1227:0,91,255:33,0 chr1 43316630 . A . PASS END=43316630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:32,0 chr1 43316631 . T . PASS END=43316637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:36,0 chr1 43316638 . T . PASS END=43316638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:36,0 chr1 43316639 . G . PASS END=43316973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1242:0,84,255:40,0 chr1 43316974 . T . PASS END=43316974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr1 43316975 . G . PASS END=43317001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1287:0,95,255:37,0 chr1 43317002 . T . PASS END=43317002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:32,0 chr1 43317003 . C . PASS END=43317014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1312:0,94,255:35,0 chr1 43317015 . G . PASS END=43317015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:35,0 chr1 43317016 . G . PASS END=43317043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:34:0,82,1197:0,82,255:37,0 chr1 43317044 . C . PASS END=43317045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:39:0,65,1394:0,65,255:35,0 chr1 43317046 . C . PASS END=43317314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1164:0,83,255:40,0 chr1 43317315 . G . PASS END=43317316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43317317 . G . PASS END=43317324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 43317325 . C . PASS END=43317360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,947:0,68,255:26,0 chr1 43317361 . G . PASS END=43317361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 43317362 . A . PASS END=43317362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43317363 . C . PASS END=43317375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43317376 . G . PASS END=43317381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 43317382 . C . PASS END=43317382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 43317383 . T . PASS END=43317383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 43317384 . A . PASS END=43317392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 43317393 . C . PASS END=43317394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:25,0 chr1 43317395 . G . PASS END=43317441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:31,0 chr1 43317442 . G . PASS END=43317442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 43317443 . A . PASS END=43317452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43317453 . T . PASS END=43317456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 43317457 . C . PASS END=43317459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43317460 . A . PASS END=43317484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,862:0,61,255:26,0 chr1 43391101 . A . PASS END=43391101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 43391148 . G . PASS END=43391148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43391375 . T . PASS END=43391375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 43391391 . A . PASS END=43391391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 43391431 . T . PASS END=43391431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 43391466 . C . PASS END=43391466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 43391507 . G . PASS END=43391507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 43391563 . G . PASS END=43391563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 43391565 . C . PASS END=43391565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 43391631 . A . PASS END=43391631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1015:0,49,255:29,0 chr1 43391633 . A . PASS END=43391633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:31,0 chr1 43391696 . T . PASS END=43391696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 43391928 . T . PASS END=43391928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43391937 . T . PASS END=43391937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43391962 . A . PASS END=43391962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 43392061 . C . PASS END=43392061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 43392103 . C . PASS END=43392103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 43392115 . C . PASS END=43392115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 43392125 . T . PASS END=43392125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 43392152 . A . PASS END=43392152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43392198 . C . PASS END=43392198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 43392299 . C . PASS END=43392299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 43392344 . T . PASS END=43392344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 43392390 . A . PASS END=43392390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr1 43392478 . T . PASS END=43392528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:37:0,95,1303:0,95,255:40,0 chr1 43392605 . C . PASS END=43392605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43392620 . C . PASS END=43392620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43392638 . T . PASS END=43392649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 43392712 . T . PASS END=43392712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 43392713 . C . PASS END=43392728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:28,0 chr1 43392729 . C . PASS END=43392731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43392732 . C . PASS END=43392734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43392735 . G . PASS END=43392736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43392737 . G . PASS END=43392746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,89,255:32,0 chr1 43392747 . G . PASS END=43392747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:29,0 chr1 43392748 . C . PASS END=43392834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1217:0,80,255:36,0 chr1 43392835 . A . PASS END=43392836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1050:0,63,255:29,0 chr1 43392837 . C . PASS END=43392837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr1 43392838 . T . PASS END=43392838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr1 43392839 . T . PASS END=43392856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1058:0,82,255:32,0 chr1 43392857 . A . PASS END=43392857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:29,0 chr1 43392858 . A . PASS END=43392865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:31,0 chr1 43392866 . A . PASS END=43392866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:27,0 chr1 43392867 . C . PASS END=43392869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1133:0,80,255:28,0 chr1 43392870 . G . PASS END=43392877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:24,0 chr1 43392878 . G . PASS END=43392912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:19,0 chr1 43392919 . G . PASS END=43392919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 43393276 . C . PASS END=43393279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 43393280 . A . PASS END=43393280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 43393281 . C . PASS END=43393288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 43393289 . A . PASS END=43393294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr1 43393295 . A . PASS END=43393295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 43393296 . T . PASS END=43393320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:26,0 chr1 43393321 . G . PASS END=43393321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43393322 . T . PASS END=43393322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 43393323 . T . PASS END=43393324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 43393325 . G . PASS END=43393325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 43393326 . A . PASS END=43393328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 43393329 . A . PASS END=43393329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43393330 . G . PASS END=43393332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43393333 . T . PASS END=43393391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,908:0,71,255:26,0 chr1 43393392 . A . PASS END=43393392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:23,0 chr1 43393393 . T . PASS END=43393418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr1 43393419 . A . PASS END=43393419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:20,0 chr1 43393420 . G . PASS END=43393430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,947:0,72,255:26,0 chr1 43393431 . A . PASS END=43393435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 43393436 . A . PASS END=43393449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 43393450 . G . PASS END=43393450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:23,0 chr1 43393451 . C . PASS END=43393451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 43393452 . T . PASS END=43393452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr1 43393453 . C . PASS END=43393456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:22,0 chr1 43393457 . T . PASS END=43393463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:22:0,44,765:0,44,255:19,0 chr1 43393464 . T . PASS END=43393464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:16,0 chr1 43393465 . C . PASS END=43393479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:17,0 chr1 43394603 . C . PASS END=43394607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 43394608 . G . PASS END=43394623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 43394624 . C . PASS END=43394624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 43394625 . A . PASS END=43394665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:28:0,83,995:0,83,255:31,0 chr1 43394666 . G . PASS END=43394666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 43394667 . T . PASS END=43394672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 43394673 . G . PASS END=43394683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr1 43394684 . T . PASS END=43394684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 43394685 . G . PASS END=43394700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,963:0,78,255:26,0 chr1 43394701 . A . PASS END=43394701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,768:0,45,255:23,0 chr1 43394702 . C . PASS END=43394704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:25,0 chr1 43394873 . A . PASS END=43394873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1127:0,96,255:32,0 chr1 43394875 . A . PASS END=43394875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1103:0,82,255:32,0 chr1 43394877 . T . PASS END=43394877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1103:0,82,255:31,0 chr1 43394881 . C . PASS END=43394893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 43394894 . A . PASS END=43394894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr1 43394895 . A . PASS END=43394954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,86,255:34,0 chr1 43394955 . T . PASS END=43394985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr1 43395264 . A . PASS END=43395265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 43395266 . C . PASS END=43395270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,270:0,14,255:6,0 chr1 43395271 . A . PASS END=43395283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:20:9:0,20,304:0,20,255:9,0 chr1 43395284 . G . PASS END=43395305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 43395306 . A . PASS END=43395306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 43395307 . G . PASS END=43395313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 43395314 . G . PASS END=43395333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,482:0,42,255:18,0 chr1 43395334 . G . PASS END=43395334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:17,0 chr1 43395335 . G . PASS END=43395336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 43395337 . G . PASS END=43395341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 43395342 . G . PASS END=43395343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 43395344 . A . PASS END=43395352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 43395353 . G . PASS END=43395353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 43395354 . G . PASS END=43395365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 43395366 . C . PASS END=43395366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 43395367 . T . PASS END=43395379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 43395380 . T . PASS END=43395380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 43395381 . C . PASS END=43395385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 43395386 . G . PASS END=43395386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,0 chr1 43395387 . A . PASS END=43395388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 43395389 . T . PASS END=43395389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 43395390 . C . PASS END=43395390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:18,0 chr1 43395391 . T . PASS END=43395391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 43395392 . C . PASS END=43395393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,806:0,42,255:20,0 chr1 43395394 . T . PASS END=43395397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 43395398 . T . PASS END=43395398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr1 43395399 . C . PASS END=43395406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:21,0 chr1 43395407 . G . PASS END=43395407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:20,0 chr1 43395408 . C . PASS END=43395408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43395409 . A . PASS END=43395410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43395411 . G . PASS END=43395422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,892:0,66,255:24,0 chr1 43395423 . G . PASS END=43395423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 43395424 . T . PASS END=43395428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 43395429 . T . PASS END=43395429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 43395430 . G . PASS END=43395430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 43395431 . T . PASS END=43395431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:22,0 chr1 43395432 . C . PASS END=43395438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 43395439 . A . PASS END=43395439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 43395440 . G . PASS END=43395441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 43395442 . T . PASS END=43395442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 43395443 . T . PASS END=43395443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 43395444 . C . PASS END=43395444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 43395445 . T . PASS END=43395445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 43395446 . T . PASS END=43395446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 43395447 . T . PASS END=43395448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 43395449 . G . PASS END=43395449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:24,0 chr1 43395450 . C . PASS END=43395450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:25,0 chr1 43395451 . A . PASS END=43395451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:21,0 chr1 43395454 . G . PASS END=43395454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 43395461 . C . PASS END=43395462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 43395539 . C . PASS END=43395540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1374:0,114,255:38,0 chr1 43395543 . C . PASS END=43395701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1215:0,87,255:40,1 chr1 43395702 . A . PASS END=43395707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 43396290 . A . PASS END=43396290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 43396297 . C . PASS END=43396318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 43396319 . A . PASS END=43396335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,474:0,32,255:13,0 chr1 43396336 . C . PASS END=43396336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 43396337 . A . PASS END=43396372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:18,0 chr1 43396373 . A . PASS END=43396373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,619:0,18,255:17,0 chr1 43396374 . C . PASS END=43396376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43396377 . C . PASS END=43396393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,845:0,63,255:24,0 chr1 43396394 . A . PASS END=43396394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr1 43396395 . C . PASS END=43396416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:26,0 chr1 43396417 . G . PASS END=43396418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 43396419 . A . PASS END=43396419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 43396420 . C . PASS END=43396421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 43396422 . C . PASS END=43396422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43396423 . A . PASS END=43396427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 43396428 . T . PASS END=43396428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr1 43396429 . G . PASS END=43396431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43396432 . G . PASS END=43396432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 43396433 . A . PASS END=43396436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 43396437 . G . PASS END=43396437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr1 43396438 . G . PASS END=43396441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 43396442 . A . PASS END=43396442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 43396443 . G . PASS END=43396443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 43396444 . G . PASS END=43396444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,1016:0,21,255:28,0 chr1 43396445 . A . PASS END=43396446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 43396447 . C . PASS END=43396447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 43396448 . A . PASS END=43396451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1139:0,90,255:30,0 chr1 43396452 . T . PASS END=43396452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 43396453 . C . PASS END=43396463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:29,0 chr1 43396464 . T . PASS END=43396464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 43396465 . G . PASS END=43396470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 43396471 . T . PASS END=43396471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 43396472 . T . PASS END=43396472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 43396473 . T . PASS END=43396473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 43396474 . C . PASS END=43396477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1035:0,87,255:29,0 chr1 43396478 . A . PASS END=43396487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 43396488 . G . PASS END=43396495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43396496 . G . PASS END=43396516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 43396517 . A . PASS END=43396517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 43396518 . T . PASS END=43396519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 43396520 . A . PASS END=43396520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 43396521 . T . PASS END=43396521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 43396522 . C . PASS END=43396538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,665:0,41,255:19,0 chr1 43396544 . A . PASS END=43396545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:16,0 chr1 43396717 . C . PASS END=43396718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 43396719 . G . PASS END=43396719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 43396720 . C . PASS END=43396729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:17,0 chr1 43396730 . T . PASS END=43396730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 43396731 . A . PASS END=43396739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:18:0,46,646:0,46,255:20,0 chr1 43396740 . G . PASS END=43396741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 43396742 . C . PASS END=43396742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 43396743 . C . PASS END=43396763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,921:0,62,255:26,0 chr1 43396764 . G . PASS END=43396779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 43396780 . A . PASS END=43396781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 43396782 . G . PASS END=43396784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 43396785 . C . PASS END=43396785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 43396786 . A . PASS END=43396792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:29,0 chr1 43396793 . G . PASS END=43396793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:27,0 chr1 43396794 . G . PASS END=43396794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,854:0,32,255:26,0 chr1 43396795 . G . PASS END=43396795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1064:0,52,255:29,0 chr1 43396796 . A . PASS END=43396802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 43396803 . C . PASS END=43396803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 43396804 . G . PASS END=43396828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr1 43396829 . T . PASS END=43396833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 43396834 . C . PASS END=43396834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43396835 . C . PASS END=43396867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,884:0,61,255:26,0 chr1 43396868 . C . PASS END=43396868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 43396869 . C . PASS END=43396877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 43396879 . T . PASS END=43396879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 43396884 . G . PASS END=43396884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 43408890 . T . PASS END=43408890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 43408894 . C . PASS END=43408894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43408897 . C . PASS END=43408905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 43408906 . G . PASS END=43408906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 43408907 . G . PASS END=43408979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1209:0,82,255:40,0 chr1 43408980 . G . PASS END=43408980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 43408981 . A . PASS END=43408992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 43408994 . T . PASS END=43408994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43408996 . C . PASS END=43408997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43409199 . A . PASS END=43409199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 43417488 . T . PASS END=43417601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:87:38:0,87,1353:0,87,255:40,0 chr1 43424293 . C . PASS END=43424293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 43424303 . A . PASS END=43424303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 43424304 . C . PASS END=43424306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43424307 . T . PASS END=43424307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 43424308 . G . PASS END=43424322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:33,0 chr1 43424324 . G . PASS END=43424324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:34,0 chr1 43424451 . C . PASS END=43424451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 43424514 . C . PASS END=43424514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43424516 . C . PASS END=43424516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43424524 . C . PASS END=43424524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,961:0,43,255:23,0 chr1 43424547 . A . PASS END=43424547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,784:0,12,255:25,0 chr1 43424594 . C . PASS END=43424594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 43424690 . T . PASS END=43424690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 43424706 . C . PASS END=43424706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 43424710 . C . PASS END=43424710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 43424746 . G . PASS END=43424746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 43424805 . C . PASS END=43424805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 43424832 . C . PASS END=43424832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 43610920 . A . PASS END=43610940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1368:0,90,255:40,0 chr1 43610941 . G . PASS END=43610941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1340:0,73,255:40,0 chr1 43610942 . G . PASS END=43610947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1535:0,113,255:40,0 chr1 43610948 . A . PASS END=43610967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:41:0,89,1170:0,89,255:40,0 chr1 43610968 . G . PASS END=43610968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 43613623 . A . PASS END=43613748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:34:0,90,1350:0,102,255:40,0 chr1 43613749 . C . PASS END=43613751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:31,0 chr1 43613752 . A . PASS END=43613754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 43613755 . A . PASS END=43613756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,88,255:27,0 chr1 43613757 . T . PASS END=43613762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,1080:0,66,255:24,0 chr1 43616432 . T . PASS END=43616491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:75:0,120,1800:0,201,255:40,0 chr1 43618499 . C . PASS END=43618558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:49:0,114,1773:0,114,255:40,0 chr1 43618559 . C . PASS END=43618595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:78:0,120,1800:0,205,255:40,0 chr1 43618596 . G A, 49.45 PASS DP=85;MQ=249.43;MQRankSum=7.906;ReadPosRankSum=3.567;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,39,0:0.459,0.000:85:22,17,0:24,22,0:48:84,0,50,1386,1604,2990:255,0,255:40,0:4.9449e+01,7.0928e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,24,20,19:24,22,24,15 chr1 43618597 . C . PASS END=43618633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:83:0,120,1800:0,221,255:40,0 chr1 43618634 . G . PASS END=43618650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,217,255:40,0 chr1 43621877 . A . PASS END=43621984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:37:0,83,1517:0,83,255:40,0 chr1 43630114 . T . PASS END=43630164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,175,255:40,0 chr1 43630314 . A . PASS END=43630476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,107,1518:0,107,255:40,0 chr1 43632497 . C . PASS END=43632498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,143,255:40,0 chr1 43632499 . C . PASS END=43632535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,101,1800:0,101,255:40,0 chr1 43632536 . C T, 44.60 PASS DP=59;MQ=250.00;MQRankSum=6.309;ReadPosRankSum=2.858;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,21,0:0.356,0.000:59:21,10,0:17,11,0:44:79,0,47,179,179,179:255,0,255:30,0:4.4601e+01,1.9389e-04,5.0000e+01,1.7937e+02,2.1414e+02,1.8238e+02:0.00,34.77,37.78,34.77,69.54,37.78:27,11,6,15:22,16,11,10 chr1 43632537 . G . PASS END=43632573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,126,255:40,0 chr1 43632574 . C . PASS END=43632590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,125,255:40,0 chr1 43632831 . C . PASS END=43632858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,126,255:40,0 chr1 43632859 . C . PASS END=43632906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,188,255:40,0 chr1 43634610 . C . PASS END=43634699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,107,1661:0,107,255:40,0 chr1 43636427 . C . PASS END=43636429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 43636430 . C . PASS END=43636430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 43636431 . T . PASS END=43636446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1057:0,87,255:37,0 chr1 43636447 . A . PASS END=43636483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1191:0,81,255:40,0 chr1 43636484 . C G, 45.86 PASS DP=46;MQ=250.00;MQRankSum=5.661;ReadPosRankSum=2.352;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,18,0:0.391,0.000:46:15,10,0:13,8,0:45:81,0,50,633,999,1632:255,0,255:25,0:4.5862e+01,1.3435e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,10,8:16,12,10,8 chr1 43636485 . G . PASS END=43636521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:35:0,87,1305:0,105,255:40,0 chr1 43636522 . C . PASS END=43636540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 43636541 . T . PASS END=43636550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 43637150 . A . PASS END=43637151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:31,0 chr1 43637152 . A . PASS END=43637152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,845:0,76,255:30,0 chr1 43637153 . C . PASS END=43637185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1115:0,82,255:34,0 chr1 43637186 . A . PASS END=43637186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:32,0 chr1 43637187 . C . PASS END=43637187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:32,0 chr1 43637188 . A . PASS END=43637188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1105:0,50,255:30,0 chr1 43637189 . G . PASS END=43637317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1215:0,93,255:40,0 chr1 43637318 . C . PASS END=43637322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:24,0 chr1 43637557 . C . PASS END=43637570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,590:0,51,255:17,1 chr1 43637571 . C . PASS END=43637571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:14,0 chr1 43637572 . C . PASS END=43637586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:18,0 chr1 43637587 . T . PASS END=43637588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 43637589 . G . PASS END=43637589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 43637590 . C . PASS END=43637595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:19,0 chr1 43637596 . A . PASS END=43637613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 43637614 . A . PASS END=43637614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:22,0 chr1 43637615 . A . PASS END=43637625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 43637626 . A . PASS END=43637626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 43637627 . A . PASS END=43637640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 43637724 . C . PASS END=43637725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 43637726 . C . PASS END=43637730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 43637731 . T . PASS END=43637731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 43637732 . C . PASS END=43637739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 43637740 . A . PASS END=43637740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:26,0 chr1 43637741 . G . PASS END=43637745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 43637746 . T . PASS END=43637746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 43637747 . C . PASS END=43637780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:30,0 chr1 43637781 . A . PASS END=43637781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:27,0 chr1 43637782 . G . PASS END=43637801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 43637802 . A . PASS END=43637812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:25,0 chr1 43637951 . A . PASS END=43637954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:24,0 chr1 43637955 . A . PASS END=43637955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 43637956 . C . PASS END=43637956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 43637957 . T . PASS END=43637957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,753:0,25,255:22,0 chr1 43637958 . G . PASS END=43637958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 43637959 . C . PASS END=43637965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 43637966 . T . PASS END=43637966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 43637967 . T . PASS END=43637969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,906:0,72,255:24,0 chr1 43637970 . A . PASS END=43637984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,880:0,72,255:25,0 chr1 43637985 . T . PASS END=43637985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr1 43637986 . C . PASS END=43637996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 43637997 . C . PASS END=43638018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 43638019 . C . PASS END=43638022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr1 43638023 . A . PASS END=43638023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,947:0,57,255:26,0 chr1 43638024 . G . PASS END=43638024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 43638025 . G . PASS END=43638025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43638026 . A . PASS END=43638027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1025:0,71,255:27,0 chr1 43638028 . C . PASS END=43638032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43638033 . A . PASS END=43638033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 43638034 . C . PASS END=43638038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43638039 . T . PASS END=43638039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:26,0 chr1 43638040 . T . PASS END=43638044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43638045 . A . PASS END=43638045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:25,0 chr1 43638046 . G . PASS END=43638053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43638054 . G . PASS END=43638055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43638056 . T . PASS END=43638057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 43638058 . C . PASS END=43638058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr1 43638059 . T . PASS END=43638063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1109:0,80,255:30,0 chr1 43638064 . A . PASS END=43638069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 43638070 . A . PASS END=43638070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1021:0,57,255:23,0 chr1 43638071 . C . PASS END=43638089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,64,255:25,0 chr1 43638090 . C . PASS END=43638091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:19,0 chr1 43638092 . T . PASS END=43638092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:18,0 chr1 43638425 . A . PASS END=43638428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1196:0,85,255:33,0 chr1 43638429 . C . PASS END=43638431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:61:34:0,61,1147:0,61,255:33,0 chr1 43638432 . C . PASS END=43638436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1311:0,105,255:38,0 chr1 43638437 . G . PASS END=43638437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr1 43638438 . T . PASS END=43638456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1332:0,81,255:40,0 chr1 43638457 . T A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=-0.054;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:8,15,0:11,6,0:48:85,0,50,751,643,1394:255,0,255:20,0:5.0000e+01,6.6527e-05,5.2752e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,6,14,7:10,9,12,9 chr1 43638458 . T . PASS END=43638465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,109,1444:0,109,255:40,0 chr1 43638466 . T . PASS END=43638466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1398:0,71,255:39,0 chr1 43638467 . C . PASS END=43638469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:42:0,90,1537:0,90,255:40,0 chr1 43638470 . T . PASS END=43638470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:38,0 chr1 43638471 . C . PASS END=43638494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,113,1527:0,113,255:40,0 chr1 43638495 . A . PASS END=43638581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:34:0,86,1218:0,86,255:40,0 chr1 43641975 . A . PASS END=43641977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 43642792 . G . PASS END=43642882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:96:43:0,96,1600:0,96,255:40,1 chr1 43647205 . G . PASS END=43647435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:29:0,83,1260:0,83,255:40,0 chr1 43647436 . A . PASS END=43647436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1199:0,69,255:32,0 chr1 43647437 . G . PASS END=43647452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1174:0,88,255:37,0 chr1 43647453 . T . PASS END=43647453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:35,0 chr1 43647454 . G . PASS END=43647461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1293:0,95,255:37,0 chr1 43647462 . G . PASS END=43647462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1061:0,77,255:30,0 chr1 43647463 . A . PASS END=43647468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1213:0,91,255:33,0 chr1 43647469 . A . PASS END=43647469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1119:0,75,255:32,0 chr1 43647470 . G . PASS END=43647470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,988:0,41,255:30,0 chr1 43647471 . A . PASS END=43647487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1098:0,88,255:35,0 chr1 43647488 . T . PASS END=43647488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,950:0,52,255:27,0 chr1 43647489 . A . PASS END=43647492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1012:0,82,255:30,0 chr1 43647493 . T . PASS END=43647493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 43647494 . C . PASS END=43647496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 43647497 . C . PASS END=43647521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:26,0 chr1 43649262 . G . PASS END=43649262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 43649263 . T . PASS END=43649263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr1 43649264 . G . PASS END=43649264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 43649265 . A . PASS END=43649278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,645:0,51,255:18,0 chr1 43649279 . G . PASS END=43649281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 43649282 . T . PASS END=43649282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 43649283 . A . PASS END=43649283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:20,0 chr1 43649284 . A . PASS END=43649284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 43649285 . C . PASS END=43649286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:47:26:0,47,922:0,47,255:27,0 chr1 43649287 . C . PASS END=43649287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43649288 . T . PASS END=43649290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 43649291 . G . PASS END=43649292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 43649293 . T . PASS END=43649293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 43649294 . G . PASS END=43649298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1156:0,80,255:32,0 chr1 43649299 . T . PASS END=43649299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 43649300 . C . PASS END=43649306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:28,0 chr1 43649307 . A . PASS END=43649307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:27,0 chr1 43649308 . A . PASS END=43649310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 43649311 . G . PASS END=43649311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 43649312 . G . PASS END=43649313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1186:0,93,255:31,0 chr1 43649314 . T . PASS END=43649314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 43649315 . G . PASS END=43649323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1066:0,82,255:31,0 chr1 43649324 . T . PASS END=43649324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:29,0 chr1 43649325 . C . PASS END=43649340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1172:0,93,255:35,0 chr1 43649341 . G . PASS END=43649341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 43649342 . A . PASS END=43649355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1098:0,88,255:35,0 chr1 43649356 . C . PASS END=43649392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:88:35:0,88,1235:0,88,255:39,0 chr1 43649393 . T C, 45.81 PASS DP=41;MQ=250.00;MQRankSum=5.264;ReadPosRankSum=1.935;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,15,0:0.366,0.000:41:9,11,0:17,4,0:44:81,0,47,181,181,181:255,0,255:24,0:4.5812e+01,1.5739e-04,5.0000e+01,1.8058e+02,2.1535e+02,1.8359e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,7,10,5:12,14,8,7 chr1 43649394 . C . PASS END=43649416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1365:0,87,255:39,0 chr1 43649417 . G . PASS END=43649417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:34,0 chr1 43649418 . A . PASS END=43649424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:41:0,88,1366:0,88,255:37,0 chr1 43649425 . T . PASS END=43649425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1175:0,66,255:36,0 chr1 43649426 . T . PASS END=43649430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:38:0,96,1365:0,98,255:35,0 chr1 43649431 . C . PASS END=43649443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,98,255:36,0 chr1 43649444 . A . PASS END=43649444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1044:0,61,255:32,0 chr1 43649445 . C . PASS END=43649470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,984:0,85,255:34,0 chr1 43649471 . G . PASS END=43649482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,86,255:29,0 chr1 43649483 . C . PASS END=43649497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:25:0,62,945:0,62,255:25,0 chr1 43649498 . G . PASS END=43649507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:24:0,44,720:0,44,255:19,0 chr1 43649508 . A G, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,9,0:0,14,0:66:154,69,0,879,69,879:255,69,0:0,0:1.1622e+02,6.6220e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,17:0,0,10,13 chr1 43649509 . A . PASS END=43649525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 43649526 . G . PASS END=43649545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 43649546 . G . PASS END=43649547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 43649548 . G . PASS END=43649548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 43650820 . C . PASS END=43650827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 43650828 . A . PASS END=43650828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 43650829 . A . PASS END=43650832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 43650833 . C . PASS END=43650842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 43650843 . G . PASS END=43650857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,740:0,63,255:24,0 chr1 43650858 . C . PASS END=43650859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43650860 . T . PASS END=43650860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:27,0 chr1 43650861 . A . PASS END=43650878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1094:0,90,255:30,0 chr1 43650879 . C . PASS END=43650879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 43650880 . C . PASS END=43650966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1190:0,80,255:40,0 chr1 43650967 . A . PASS END=43650967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:32,0 chr1 43650968 . G . PASS END=43650979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:34:0,87,1305:0,92,255:34,0 chr1 43650980 . G . PASS END=43650982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 43650983 . A . PASS END=43650984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:33:0,84,1260:0,88,255:28,0 chr1 43650985 . G . PASS END=43650985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 43650986 . A . PASS END=43650988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 43650989 . G . PASS END=43650989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:26,0 chr1 43650990 . A . PASS END=43650994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 43650995 . A . PASS END=43650995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 43650996 . A . PASS END=43651001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43651002 . T . PASS END=43651015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,895:0,65,255:26,0 chr1 43651016 . A . PASS END=43651016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:19,0 chr1 43651017 . G . PASS END=43651017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:19,0 chr1 43651018 . A . PASS END=43651027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:44:20:0,44,675:0,44,255:19,0 chr1 43652378 . A . PASS END=43652378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 43652379 . T . PASS END=43652379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43652380 . T . PASS END=43652382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,992:0,68,255:29,0 chr1 43652383 . T . PASS END=43652383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43652384 . G . PASS END=43652384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:28,0 chr1 43652385 . T . PASS END=43652387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 43652388 . A . PASS END=43652388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 43652389 . C . PASS END=43652393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:32,0 chr1 43652394 . A . PASS END=43652394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:31,0 chr1 43652395 . G . PASS END=43652406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:37,0 chr1 43652407 . A . PASS END=43652513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:34:0,87,1305:0,90,255:40,0 chr1 43652514 . T . PASS END=43652514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:29,0 chr1 43652515 . G . PASS END=43652518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:29,0 chr1 43652519 . G . PASS END=43652527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:23,0 chr1 43652528 . A . PASS END=43652530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:24:0,57,855:0,68,255:19,0 chr1 43663224 . G . PASS END=43663338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:40:0,82,1473:0,82,255:40,0 chr1 43663339 . T . PASS END=43663363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1213:0,91,255:36,0 chr1 43664152 . C . PASS END=43664152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 43664153 . A . PASS END=43664153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 43664154 . C . PASS END=43664156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:33,0 chr1 43664157 . T . PASS END=43664157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:32,0 chr1 43664158 . G . PASS END=43664160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1221:0,102,255:34,0 chr1 43664161 . A . PASS END=43664161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 43664162 . C . PASS END=43664180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:89:35:0,89,1255:0,89,255:40,0 chr1 43664181 . A . PASS END=43664217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,105,1313:0,105,255:40,0 chr1 43664218 . C T, 50.00 PASS DP=52;MQ=249.77;MQRankSum=6.057;ReadPosRankSum=4.726;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,29,0:0.569,0.000:51:7,16,0:15,13,0:48:85,0,48,1037,787,1824:255,0,255:21,0:5.0000e+01,7.4811e-05,5.1422e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,8,15,14:9,13,14,15 chr1 43664219 . T . PASS END=43664255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,113,1562:0,113,255:40,0 chr1 43664256 . T . PASS END=43664274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,110,1484:0,110,255:40,0 chr1 43664275 . T . PASS END=43664295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:41:0,96,1440:0,107,255:39,0 chr1 43664296 . C . PASS END=43664301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:60:41:0,60,900:0,90,255:23,0 chr1 43664302 . T . PASS END=43664307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:42:30:0,42,630:0,71,255:19,0 chr1 43664308 . A . PASS END=43664317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:33:25:0,33,495:0,42,255:13,0 chr1 43665061 . T . PASS END=43665174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:73:0,120,1800:0,195,255:40,0 chr1 43672391 . A . PASS END=43672391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,969:0,60,255:32,0 chr1 43672392 . T . PASS END=43672405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:32:0,85,1105:0,85,255:35,0 chr1 43672406 . T . PASS END=43672406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:34,0 chr1 43672407 . G . PASS END=43672577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1060:0,83,255:40,0 chr1 43672578 . C . PASS END=43672588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,74,255:25,0 chr1 43672589 . A . PASS END=43672599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,762:0,52,255:19,0 chr1 43672600 . C . PASS END=43672600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 43672601 . T . PASS END=43672601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43672602 . T . PASS END=43672603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 43675414 . A . PASS END=43675416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 43675417 . C . PASS END=43675423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 43675424 . A . PASS END=43675424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:27,0 chr1 43675425 . G . PASS END=43675425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 43675426 . A . PASS END=43675426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,879:0,67,255:27,0 chr1 43675427 . T . PASS END=43675429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 43675430 . C . PASS END=43675466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,951:0,87,255:40,0 chr1 43675467 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=3.828;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:11,10,0:9,10,0:48:85,0,50,633,707,1340:255,0,255:20,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,7,13,7:8,12,11,9 chr1 43675468 . C . PASS END=43675504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,104,1457:0,104,255:40,0 chr1 43675505 . G . PASS END=43675755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:44:0,102,1497:0,102,255:40,0 chr1 43680926 . A . PASS END=43681087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:35:0,89,1227:0,89,255:40,0 chr1 43685053 . G . PASS END=43685059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:37,0 chr1 43685060 . T . PASS END=43685060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:35,0 chr1 43685061 . T . PASS END=43685223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:33:0,87,1305:0,90,255:40,0 chr1 43687043 . G . PASS END=43687136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,130,255:40,0 chr1 43687776 . A . PASS END=43687798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,723:0,63,255:23,0 chr1 43687799 . C . PASS END=43687799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 43687800 . T . PASS END=43687815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,815:0,69,255:26,0 chr1 43687816 . G . PASS END=43687817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43687818 . A . PASS END=43687818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 43687819 . C . PASS END=43687822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr1 43687823 . G . PASS END=43687823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 43687824 . A . PASS END=43687858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1157:0,93,255:39,0 chr1 43687859 . T . PASS END=43687859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:38,0 chr1 43687860 . A . PASS END=43687966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:39:0,95,1398:0,95,255:40,0 chr1 43688495 . G . PASS END=43688515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1141:0,93,255:37,0 chr1 43688516 . C . PASS END=43688516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:36,0 chr1 43688517 . A . PASS END=43688527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,114,1406:0,114,255:40,0 chr1 43688528 . T . PASS END=43688528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1430:0,77,255:40,0 chr1 43688529 . T . PASS END=43688668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:32:0,81,1215:0,86,255:40,0 chr1 43689717 . T . PASS END=43689838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1213:0,87,255:40,0 chr1 43689839 . A . PASS END=43689839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:28,0 chr1 43689840 . G . PASS END=43689846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1147:0,80,255:29,0 chr1 43689847 . A . PASS END=43689875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:26,0 chr1 43692654 . G . PASS END=43692797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:53:0,120,1800:0,141,255:40,0 chr1 43697737 . A . PASS END=43697737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 43697738 . A . PASS END=43697746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr1 43697747 . T . PASS END=43697832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,936:0,81,255:38,0 chr1 43697833 . C . PASS END=43697835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43698179 . A . PASS END=43698295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,114,1481:0,114,255:40,0 chr1 43698439 . C . PASS END=43698501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,107,1482:0,107,255:40,0 chr1 43699950 . G . PASS END=43699972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:32:0,93,1395:0,96,255:40,0 chr1 43699973 . C . PASS END=43700084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:35:0,90,1350:0,96,255:40,0 chr1 43700166 . G . PASS END=43700177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr1 43700178 . G . PASS END=43700182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 43700183 . G . PASS END=43700245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,847:0,66,255:24,0 chr1 43700246 . T . PASS END=43700246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 43700247 . C . PASS END=43700282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 43700283 . C . PASS END=43700290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr1 43700291 . C . PASS END=43700309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:12,0 chr1 43708898 . G . PASS END=43708915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,941:0,75,255:26,0 chr1 43708916 . A . PASS END=43708920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 43708921 . A . PASS END=43708921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 43708922 . A . PASS END=43708922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 43708923 . T . PASS END=43708923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 43708924 . T . PASS END=43708927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 43708928 . G . PASS END=43708928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:26,0 chr1 43708929 . A . PASS END=43708932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1050:0,84,255:30,0 chr1 43708933 . C . PASS END=43708933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 43708934 . C . PASS END=43708949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1178:0,83,255:32,0 chr1 43708950 . T . PASS END=43708950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1239:0,67,255:32,0 chr1 43708951 . C . PASS END=43708999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:33:0,90,1288:0,90,255:39,0 chr1 43709000 . A . PASS END=43709000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:30,0 chr1 43709001 . A . PASS END=43709025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:33,0 chr1 43709026 . G . PASS END=43709027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:27,0 chr1 43709028 . C . PASS END=43709030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 43719648 . A . PASS END=43719859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:30:0,87,1210:0,90,255:40,0 chr1 43719860 . T . PASS END=43719860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:27,0 chr1 43719861 . G . PASS END=43719862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,86,255:29,0 chr1 43738394 . A . PASS END=43738399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 43738400 . G . PASS END=43738400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 43738401 . A . PASS END=43738401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 43738402 . A . PASS END=43738408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 43738409 . G . PASS END=43738412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 43738413 . A . PASS END=43738413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 43738414 . A . PASS END=43738417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 43738418 . C . PASS END=43738418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 43738419 . C . PASS END=43738448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,566:0,41,255:19,0 chr1 43738449 . T . PASS END=43738456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 43738457 . C . PASS END=43738457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43738458 . A . PASS END=43738493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:22,0 chr1 43738494 . C . PASS END=43738494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 43738495 . G . PASS END=43738508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 43738509 . T . PASS END=43738513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 43738514 . G . PASS END=43738524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 43738525 . C . PASS END=43738553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 43738554 . C . PASS END=43738557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 43738558 . G . PASS END=43738564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr1 43738565 . A . PASS END=43738565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,552:0,15,255:14,0 chr1 43738566 . C . PASS END=43738580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:15,0 chr1 43738581 . C . PASS END=43738582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 43738583 . G . PASS END=43738587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 43738588 . A . PASS END=43738588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 43738589 . T . PASS END=43738589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 43738590 . G . PASS END=43738590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 43738591 . G . PASS END=43738595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 43738596 . T . PASS END=43738596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 43738597 . A . PASS END=43738603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43738604 . G . PASS END=43738604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 43738605 . G . PASS END=43738614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43738615 . C . PASS END=43738627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 43738628 . C . PASS END=43738629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43738630 . G . PASS END=43738637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 43738638 . T . PASS END=43738663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,560:0,45,255:17,0 chr1 43738664 . G . PASS END=43738695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,838:0,62,255:26,0 chr1 43738696 . C . PASS END=43738719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1074:0,82,255:36,0 chr1 43738720 . T . PASS END=43738720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:34,0 chr1 43738721 . G . PASS END=43738818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:35:0,90,1243:0,91,255:40,0 chr1 43738819 . G . PASS END=43738819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:29,0 chr1 43738820 . C . PASS END=43738840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:30,0 chr1 43738841 . G . PASS END=43738845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 43738846 . C . PASS END=43738846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43738847 . A . PASS END=43738847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 43738848 . T . PASS END=43738849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 43738850 . G . PASS END=43738851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 43738852 . T . PASS END=43738853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43738854 . T . PASS END=43738863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1086:0,77,255:26,0 chr1 43738864 . G . PASS END=43738864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 43738865 . G . PASS END=43738866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 43738867 . C . PASS END=43738868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43738869 . C . PASS END=43738870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 43738871 . C . PASS END=43738875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 43738876 . G . PASS END=43738886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 43738887 . T . PASS END=43738891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43738892 . C . PASS END=43738895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43738896 . A . PASS END=43738897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43738898 . C . PASS END=43738904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 43738905 . G . PASS END=43738906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 43738907 . G . PASS END=43738907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr1 43738908 . T . PASS END=43738908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:25,0 chr1 43738909 . G . PASS END=43738918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 43738919 . T . PASS END=43738919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 43738920 . G . PASS END=43738932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 43738933 . T . PASS END=43738933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 43738934 . A . PASS END=43738937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 43738938 . C . PASS END=43738938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:27,0 chr1 43738939 . C . PASS END=43738941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 43738942 . T . PASS END=43738942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:24,0 chr1 43738943 . C . PASS END=43738957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,81,255:26,0 chr1 43738958 . G . PASS END=43738963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 43738964 . G . PASS END=43738964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 43738965 . G . PASS END=43738965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 43738966 . C . PASS END=43738966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43738967 . G . PASS END=43738997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1141:0,84,255:31,0 chr1 43738998 . A . PASS END=43738998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43738999 . G . PASS END=43738999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 43739000 . T . PASS END=43739000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 43739001 . T . PASS END=43739014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43739015 . C . PASS END=43739015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:27,0 chr1 43739016 . G . PASS END=43739021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43739022 . A . PASS END=43739048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 43739049 . T . PASS END=43739049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:18,0 chr1 43739050 . C . PASS END=43739053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 43748456 . T . PASS END=43748457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:23,0 chr1 43748458 . A . PASS END=43748458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 43748459 . G . PASS END=43748459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 43748460 . A . PASS END=43748460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 43748461 . G . PASS END=43748464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 43748465 . G . PASS END=43748465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 43748466 . A . PASS END=43748474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,862:0,61,255:26,0 chr1 43748475 . C . PASS END=43748654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1169:0,80,255:40,0 chr1 43748655 . A . PASS END=43748655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:33,0 chr1 43748656 . T . PASS END=43748754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1305:0,81,255:40,0 chr1 43748755 . G . PASS END=43748758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:33:0,78,1170:0,83,255:26,0 chr1 43748759 . C . PASS END=43748762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 43748763 . G . PASS END=43748765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43748766 . G . PASS END=43748767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 43748768 . C . PASS END=43748778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,939:0,67,255:25,0 chr1 43748923 . T . PASS END=43748923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 43748924 . T . PASS END=43748934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:24,0 chr1 43748935 . C . PASS END=43748935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 43748936 . A . PASS END=43748936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 43748937 . T . PASS END=43748937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:22,0 chr1 43748938 . T . PASS END=43748941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:23,0 chr1 43766743 . A . PASS END=43766755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 43766756 . T . PASS END=43766761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 43766762 . C . PASS END=43766764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 43766765 . T . PASS END=43766765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 43766766 . C . PASS END=43766768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43766769 . G . PASS END=43766769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 43766770 . C . PASS END=43766800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 43770522 . G . PASS END=43770530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43770531 . T . PASS END=43770532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43770533 . G . PASS END=43770547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,884:0,63,255:23,0 chr1 43770548 . G . PASS END=43770548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 43770549 . C . PASS END=43770570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:22,0 chr1 43770571 . C . PASS END=43770571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 43770572 . C . PASS END=43770572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 43770573 . A . PASS END=43770573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 43770574 . G . PASS END=43770577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 43770578 . T . PASS END=43770579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43770580 . C . PASS END=43770580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 43770581 . T . PASS END=43770629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,651:0,41,255:19,0 chr1 43770630 . C . PASS END=43770641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:32:15:0,32,495:0,32,255:12,0 chr1 43770642 . C . PASS END=43770642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 43770643 . C . PASS END=43770643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 43770644 . C . PASS END=43770670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:17,0 chr1 43770671 . G . PASS END=43770671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:17,0 chr1 43770672 . T . PASS END=43770687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 43770688 . G . PASS END=43770688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43770689 . C . PASS END=43770691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 43770692 . C . PASS END=43770746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:25,0 chr1 43770747 . A . PASS END=43770747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 43770748 . G . PASS END=43770765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:24,0 chr1 43770766 . C . PASS END=43770766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 43770767 . G . PASS END=43770774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 43770775 . C . PASS END=43770775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 43770776 . T . PASS END=43770783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,839:0,66,255:23,0 chr1 43770784 . C . PASS END=43770785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,820:0,53,255:19,0 chr1 43770786 . G . PASS END=43770788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 43770789 . C . PASS END=43770789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 43770790 . T . PASS END=43770793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 43770794 . G . PASS END=43770798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:18,0 chr1 43770799 . G . PASS END=43770802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 43770803 . A . PASS END=43770805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 43770806 . C . PASS END=43770809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 43770810 . T . PASS END=43770817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 43770818 . G . PASS END=43770819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 43770820 . G . PASS END=43770820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 43770821 . C . PASS END=43770836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 43770904 . C . PASS END=43770910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1264:0,102,255:35,0 chr1 43770911 . G . PASS END=43770911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:34,0 chr1 43770912 . C . PASS END=43770948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1184:0,92,255:36,0 chr1 43770949 . A . PASS END=43770949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:32,0 chr1 43770950 . C . PASS END=43770971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,89,255:34,0 chr1 43770972 . G . PASS END=43770972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:21,0 chr1 43770973 . T . PASS END=43770982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:29:0,42,630:0,70,255:19,0 chr1 43770983 . G . PASS END=43770992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:30:24:0,30,450:0,72,255:13,0 chr1 43770993 . G . PASS END=43770996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:21:24:0,21,315:0,45,255:9,0 chr1 43770997 . T . PASS END=43770998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:15:26:0,15,225:0,78,255:6,0 chr1 43770999 . A . LowGQ END=43771014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:24,0:24:0:22:0,0,0:0,66,255:3,0 chr1 43772511 . G . PASS END=43772517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 43772518 . C . PASS END=43772636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:27:0,80,1023:0,80,255:40,0 chr1 43772637 . G . PASS END=43772637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1288:0,48,255:34,0 chr1 43772638 . C . PASS END=43772666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:36:0,84,1260:0,92,255:38,0 chr1 43772813 . G . PASS END=43772825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 43772826 . G . PASS END=43772826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 43772827 . C . PASS END=43772905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1090:0,83,255:34,0 chr1 43772906 . T . PASS END=43772906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:29,0 chr1 43772907 . A . PASS END=43772922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:30,0 chr1 43772923 . A . PASS END=43772927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43772928 . C . PASS END=43772929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43772930 . C . PASS END=43772940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:25,0 chr1 43772941 . C . PASS END=43772944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:25:0,45,675:0,75,255:16,0 chr1 43773103 . C . PASS END=43773106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 43773107 . C . PASS END=43773107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 43773108 . A . PASS END=43773127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:25,0 chr1 43773128 . G . PASS END=43773159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1011:0,81,255:30,0 chr1 43773160 . G . PASS END=43773160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 43773161 . C . PASS END=43773161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43773162 . T . PASS END=43773162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 43773163 . G . PASS END=43773173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43773174 . A . PASS END=43773179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 43773180 . T . PASS END=43773180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43773181 . G . PASS END=43773183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 43773184 . T . PASS END=43773189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 43773190 . A . PASS END=43773197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1033:0,73,255:26,0 chr1 43773198 . G . PASS END=43773203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:27,0 chr1 43773204 . T . PASS END=43773204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 43773205 . C . PASS END=43773205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 43773206 . T . PASS END=43773206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 43773207 . T . PASS END=43773207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 43773208 . G . PASS END=43773220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:26,0 chr1 43773221 . G . PASS END=43773240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:17:0,48,651:0,51,255:19,0 chr1 43773241 . A . PASS END=43773241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr1 43773242 . A . PASS END=43773243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 43773467 . C . PASS END=43773474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1119:0,80,255:33,0 chr1 43773475 . C . PASS END=43773475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:31,0 chr1 43773476 . C . PASS END=43773589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1164:0,83,255:40,0 chr1 43773590 . A . PASS END=43773595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:26,0 chr1 43774542 . G . PASS END=43774544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 43774545 . G . PASS END=43774545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 43774546 . G . PASS END=43774570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,560:0,45,255:18,0 chr1 43774571 . G . PASS END=43774572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 43774573 . G . PASS END=43774573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43774574 . A . PASS END=43774607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 43774608 . A . PASS END=43774608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 43774609 . C . PASS END=43774610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 43774611 . T . PASS END=43774611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr1 43774612 . G . PASS END=43774621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 43774622 . G . PASS END=43774622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 43774623 . T . PASS END=43774635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 43774636 . A . PASS END=43774639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 43774657 . A . PASS END=43774671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:19:0,46,706:0,46,255:19,0 chr1 43774672 . T . PASS END=43774697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 43774698 . T . PASS END=43774698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 43774699 . T . PASS END=43774699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43774700 . C . PASS END=43774706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43774707 . G . PASS END=43774710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43774711 . C . PASS END=43774729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 43774730 . T . PASS END=43774730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:16,0 chr1 43774731 . G . PASS END=43774742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 43774743 . A . PASS END=43774757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 43774758 . C . PASS END=43774778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,319:0,27,255:9,0 chr1 43774779 . A . PASS END=43774780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 43774781 . G . PASS END=43774794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 43774795 . T . PASS END=43774795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 43774796 . G . PASS END=43774796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 43774797 . C . PASS END=43774797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 43774798 . T . PASS END=43774800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 43774801 . T . PASS END=43774801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 43774802 . G . PASS END=43774802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 43775059 . T . PASS END=43775071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,652:0,44,255:19,0 chr1 43775072 . T . PASS END=43775072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 43775073 . T . PASS END=43775074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 43775075 . T . PASS END=43775078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 43775079 . G . PASS END=43775079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43775080 . C . PASS END=43775084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 43775085 . G . PASS END=43775085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 43775086 . A . PASS END=43775086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr1 43775087 . A . PASS END=43775099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,848:0,61,255:26,0 chr1 43775100 . G . PASS END=43775100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 43775101 . T . PASS END=43775101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,740:0,33,255:25,0 chr1 43775102 . T . PASS END=43775109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43775110 . C . PASS END=43775115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1056:0,84,255:29,0 chr1 43775116 . T . PASS END=43775116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:28,0 chr1 43775117 . T . PASS END=43775120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 43775121 . T . PASS END=43775121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,963:0,73,255:28,0 chr1 43775122 . C . PASS END=43775143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1124:0,80,255:31,0 chr1 43775144 . A . PASS END=43775144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:25,0 chr1 43775145 . G . PASS END=43775148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43775149 . C . PASS END=43775192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:26,0 chr1 43775193 . C . PASS END=43775193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 43775194 . A . PASS END=43775194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr1 43775195 . A . PASS END=43775195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:20,0 chr1 43775196 . T . PASS END=43775200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 43775201 . A . PASS END=43775201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 43775202 . A . PASS END=43775202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43775203 . G . PASS END=43775203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43777342 . T . PASS END=43777342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 43777343 . G . PASS END=43777346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43777347 . C . PASS END=43777347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 43777348 . C . PASS END=43777352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 43777353 . C . PASS END=43777353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 43777354 . C . PASS END=43777356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,906:0,72,255:24,0 chr1 43777357 . T . PASS END=43777358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 43777359 . G . PASS END=43777359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 43777360 . C . PASS END=43777361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 43777362 . G . PASS END=43777362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43777363 . C . PASS END=43777386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 43777387 . G . PASS END=43777387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 43777388 . C . PASS END=43777388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43777389 . C . PASS END=43777389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 43777390 . G . PASS END=43777457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1081:0,80,255:32,0 chr1 43777458 . T . PASS END=43777473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 43777474 . G . PASS END=43777500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 43777665 . T . PASS END=43777666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43777667 . G . PASS END=43777667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 43777668 . A . PASS END=43777699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1102:0,83,255:35,0 chr1 43777700 . A . PASS END=43777700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 43777701 . G . PASS END=43777749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1405:0,101,255:39,0 chr1 43777750 . A . PASS END=43777750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:30,0 chr1 43777751 . G . PASS END=43777757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:32,0 chr1 43777758 . A . PASS END=43777763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,79,255:26,0 chr1 43777764 . C . PASS END=43777779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43777780 . C . PASS END=43777789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 43777790 . A . PASS END=43777795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,630:0,81,255:19,0 chr1 43777796 . T . PASS END=43777802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:23:0,36,540:0,69,255:13,0 chr1 43777976 . A . PASS END=43777976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,339:0,3,255:10,0 chr1 43777977 . G . PASS END=43777977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 43777978 . C . PASS END=43777978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 43777979 . C . LowGQ END=43777979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 43777980 . T . PASS END=43777980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr1 43777981 . T . PASS END=43777981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 43777982 . T . PASS END=43777983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 43777984 . T . PASS END=43777984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 43777985 . T . PASS END=43777986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 43777987 . C . PASS END=43777988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 43777989 . G . PASS END=43777995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 43777996 . T . PASS END=43777996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 43777997 . T . PASS END=43778005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 43778006 . G . PASS END=43778008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 43778009 . A . PASS END=43778009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 43778010 . T . PASS END=43778030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:19,0 chr1 43778031 . G . PASS END=43778031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 43778032 . C . PASS END=43778032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 43778033 . G . PASS END=43778037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 43778038 . A . PASS END=43778038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 43778039 . G . PASS END=43778065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:26,0 chr1 43778066 . C . PASS END=43778066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 43778067 . A . PASS END=43778067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:26,0 chr1 43778068 . C . PASS END=43778089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 43778090 . T . PASS END=43778093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43778094 . C . PASS END=43778094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43778095 . C . PASS END=43778109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,74,255:26,0 chr1 43778110 . C . PASS END=43778144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,981:0,84,255:30,0 chr1 43778145 . C . PASS END=43778173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 43778174 . T . PASS END=43778176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr1 43778177 . C . PASS END=43778177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:17,0 chr1 43778178 . G . PASS END=43778208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:19,0 chr1 43778209 . C . PASS END=43778213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 43778214 . C . PASS END=43778229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 43778230 . G . PASS END=43778248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,382:0,33,255:11,0 chr1 43778249 . C . PASS END=43778258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 43778259 . T . PASS END=43778272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,390:0,36,255:12,0 chr1 43778806 . G . PASS END=43778815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 43778816 . C . PASS END=43778826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:18,0 chr1 43778827 . T . PASS END=43778844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:26,0 chr1 43778845 . C . PASS END=43778872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,979:0,84,255:29,0 chr1 43778873 . G . PASS END=43778873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 43778874 . C . PASS END=43779014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1247:0,81,255:40,0 chr1 43779015 . C . PASS END=43779015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:32,0 chr1 43779016 . G . PASS END=43779023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1443:0,82,255:33,0 chr1 43779024 . T . PASS END=43779024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:33,0 chr1 43779025 . T . PASS END=43779059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1208:0,83,255:35,0 chr1 43779060 . T . PASS END=43779076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,65,255:25,0 chr1 43779077 . A . PASS END=43779080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:24:0,51,765:0,72,255:18,0 chr1 43779081 . T . PASS END=43779081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:17,0 chr1 43779082 . C . PASS END=43779096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,44,255:17,0 chr1 43779449 . G . PASS END=43779450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1194:0,93,255:32,0 chr1 43779451 . C . PASS END=43779451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 43779452 . T . PASS END=43779526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:32:0,82,1186:0,82,255:40,0 chr1 43779527 . T . PASS END=43779563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1435:0,104,255:40,0 chr1 43779564 . T C, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,24,0:0,17,0:120:208,123,0,1579,123,1579:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,17:0,0,23,18 chr1 43779565 . G . PASS END=43779585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:33:0,81,1152:0,88,255:34,0 chr1 43779586 . A . PASS END=43779593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:26,0 chr1 43779594 . A . PASS END=43779601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 43779602 . T . PASS END=43779602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 43779603 . G . PASS END=43779603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 43779604 . C . PASS END=43779613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:32,0 chr1 43779614 . G . PASS END=43779614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:26,0 chr1 43779615 . C . PASS END=43779617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 43779618 . C . PASS END=43779619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43779620 . T . PASS END=43779639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,937:0,62,255:26,0 chr1 43780054 . G . PASS END=43780059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,717:0,60,255:21,0 chr1 43780060 . C . PASS END=43780060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:19,0 chr1 43780061 . T . PASS END=43780079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 43780080 . C . PASS END=43780082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 43780083 . T . PASS END=43780083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 43780084 . C . PASS END=43780092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 43780093 . T . PASS END=43780093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1029:0,60,255:29,0 chr1 43780094 . C . PASS END=43780128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1127:0,85,255:32,0 chr1 43780129 . T . PASS END=43780133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 43780134 . G . PASS END=43780136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 43780137 . G . PASS END=43780137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43782870 . G . PASS END=43782879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43782880 . C . PASS END=43782881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43782882 . A . PASS END=43782883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 43782884 . C . PASS END=43782930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1127:0,82,255:36,0 chr1 43782931 . T . PASS END=43782931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 43782932 . G . PASS END=43783056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1125:0,90,255:40,0 chr1 43783057 . A . PASS END=43783057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 43783058 . C . PASS END=43783059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:29,0 chr1 43783060 . C . PASS END=43783060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 43783061 . A . PASS END=43783069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 43783070 . A . PASS END=43783070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:27,0 chr1 43783071 . A . PASS END=43783078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43783079 . A . PASS END=43783080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 43783235 . A . PASS END=43783276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1161:0,91,255:37,0 chr1 43783277 . T . PASS END=43783277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1268:0,72,255:36,0 chr1 43783278 . G . PASS END=43783317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,95,255:38,0 chr1 43783318 . A . PASS END=43783345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1004:0,75,255:27,0 chr1 43783553 . G . PASS END=43783568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,814:0,63,255:24,0 chr1 43783569 . T . PASS END=43783569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 43783570 . A . PASS END=43783578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 43783579 . G . PASS END=43783579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 43783580 . C . PASS END=43783583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:25,0 chr1 43783584 . C . PASS END=43783592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 43783593 . C . PASS END=43783593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43783594 . C . PASS END=43783598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43783599 . A . PASS END=43783599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 43783600 . G . PASS END=43783602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 43783603 . T . PASS END=43783603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:12:30:0,12,933:0,12,255:27,0 chr1 43783604 . T . PASS END=43783604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 43783605 . T . PASS END=43783617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43783618 . C . PASS END=43783622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1100:0,74,255:26,0 chr1 43783623 . C . PASS END=43783636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 43783637 . C . PASS END=43783644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43783645 . G . PASS END=43783651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 43783652 . A . PASS END=43783652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 43783653 . G . PASS END=43783654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 43783655 . A . PASS END=43783655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 43783656 . T . PASS END=43783656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 43783657 . G . PASS END=43783657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 43783658 . G . PASS END=43783668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 43783669 . A . PASS END=43783669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 43783670 . C . PASS END=43783672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 43783673 . T . PASS END=43783673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 43783674 . T . PASS END=43783674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 43783675 . A . PASS END=43783675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 43783676 . G . PASS END=43783708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1080:0,87,255:31,0 chr1 43783709 . C . PASS END=43783709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 43783710 . G . PASS END=43783714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 43783715 . A . PASS END=43783715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:25,0 chr1 43783716 . T . PASS END=43783716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 43783717 . G . PASS END=43783728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1100:0,77,255:26,0 chr1 43783729 . C . PASS END=43783730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 43783731 . G . PASS END=43783742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,68,255:26,0 chr1 43783743 . G . PASS END=43783743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 43784906 . T . PASS END=43785019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1064:0,80,255:38,0 chr1 43785130 . G . PASS END=43785186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1244:0,84,255:40,0 chr1 43785187 . A . PASS END=43785187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr1 43785188 . C . PASS END=43785200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1097:0,85,255:30,0 chr1 43786940 . C . PASS END=43786942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 43786943 . G . PASS END=43786950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,935:0,81,255:28,0 chr1 43786951 . G . PASS END=43786951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 43786952 . A . PASS END=43786957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 43786958 . T . PASS END=43786958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43786959 . C . PASS END=43786961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43786962 . T . PASS END=43786962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 43786963 . G . PASS END=43786968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43786969 . T . PASS END=43786980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:29,0 chr1 43787067 . G . PASS END=43787080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr1 43787081 . T . PASS END=43787091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 43787092 . C . PASS END=43787106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 43787107 . T . PASS END=43787118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,737:0,57,255:19,0 chr1 43787119 . C . PASS END=43787119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 43787120 . C . PASS END=43787163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 43787287 . G . PASS END=43787314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,876:0,69,255:26,0 chr1 43787315 . G . PASS END=43787316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 43787317 . C . PASS END=43787318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43787319 . G . PASS END=43787379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1164:0,87,255:33,0 chr1 43787380 . C . PASS END=43787386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43788322 . G . PASS END=43788349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1232:0,84,255:40,0 chr1 43788350 . A . PASS END=43788350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1331:0,75,255:35,0 chr1 43788351 . C . PASS END=43788393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1374:0,101,255:40,0 chr1 43803507 . A . PASS END=43803507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 43803520 . A . PASS END=43803726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1081:0,85,255:40,0 chr1 43803727 . A . PASS END=43803727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:29,0 chr1 43803728 . T . PASS END=43803753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1158:0,80,255:33,0 chr1 43803754 . A . PASS END=43803754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 43803755 . C . PASS END=43803772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 43803773 . T . PASS END=43803773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 43803774 . C . PASS END=43803787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:32,0 chr1 43803788 . C . PASS END=43803856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,795:0,61,255:26,0 chr1 43803857 . A . PASS END=43803857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 43803858 . G . PASS END=43803863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 43803864 . G . PASS END=43803902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,566:0,45,255:19,0 chr1 43804213 . G . PASS END=43804218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 43804219 . G . PASS END=43804228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1062:0,87,255:31,0 chr1 43804229 . T . PASS END=43804229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 43804230 . G . PASS END=43804383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:31:0,86,1194:0,86,255:40,0 chr1 43804384 . C . PASS END=43804391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,80,255:23,0 chr1 43804396 . G . PASS END=43804396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 43804942 . G . PASS END=43804954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:13,0 chr1 43804955 . C . PASS END=43804975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,498:0,42,255:19,0 chr1 43804976 . G . PASS END=43804992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:22,0 chr1 43804993 . G . PASS END=43804993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 43804994 . G . PASS END=43805007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:25,0 chr1 43805008 . G . PASS END=43805010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 43805011 . G . PASS END=43805011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43805012 . G . PASS END=43805018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43805019 . C . PASS END=43805046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,947:0,64,255:26,0 chr1 43805047 . G . PASS END=43805136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1080:0,83,255:34,0 chr1 43805137 . C . PASS END=43805137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr1 43805138 . T . PASS END=43805144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,85,255:27,0 chr1 43805145 . A . PASS END=43805186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,62,255:25,0 chr1 43805187 . C . PASS END=43805202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:16,0 chr1 43805203 . G . PASS END=43805203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 43805204 . G . PASS END=43805209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,551:0,34,255:13,0 chr1 43805210 . T . PASS END=43805210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:13,0 chr1 43805211 . G . PASS END=43805211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 43805212 . G . PASS END=43805229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:16,0 chr1 43805230 . C . PASS END=43805231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:13,0 chr1 43805232 . A . PASS END=43805232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43805233 . G . PASS END=43805233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:13,0 chr1 43805234 . T . PASS END=43805234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43805235 . A . PASS END=43805238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 43805239 . A . PASS END=43805239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,482:0,9,255:12,0 chr1 43805240 . A G, 28.21 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=1.093;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,6,0:0.462,0.000:13:4,3,0:3,3,0:28:63,0,47,163,163,163:166,0,229:8,0:2.8206e+01,6.6127e-03,5.0007e+01,1.6298e+02,1.9775e+02,1.6599e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,4,0,6:2,5,3,3 chr1 43805251 . C . PASS END=43805251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 43805635 . G . PASS END=43805654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr1 43805655 . G . PASS END=43805739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1074:0,84,255:36,0 chr1 43805740 . G . PASS END=43805740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:35,0 chr1 43805741 . G . PASS END=43805786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1202:0,83,255:37,0 chr1 43805787 . T . PASS END=43805789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43805790 . A . PASS END=43805791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 43805792 . A . PASS END=43805792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 43805793 . T . PASS END=43805793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43805794 . G . PASS END=43805797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 43806055 . T . PASS END=43806055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 43806058 . T . PASS END=43806184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:38:0,96,1530:0,96,255:40,0 chr1 43812115 . G . PASS END=43812123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1252:0,102,255:35,0 chr1 43812124 . T . PASS END=43812124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1192:0,58,255:32,0 chr1 43812125 . C . PASS END=43812131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,108,1620:0,111,255:40,0 chr1 43812132 . A . PASS END=43812132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1310:0,68,255:38,0 chr1 43812133 . A . PASS END=43812266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,89,255:40,0 chr1 43812267 . T . PASS END=43812274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 43812275 . C . PASS END=43812278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 43812279 . C . PASS END=43812290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,911:0,67,255:25,0 chr1 43812291 . C . PASS END=43812291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,846:0,39,255:23,0 chr1 43812292 . A . PASS END=43812301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr1 43812463 . T . PASS END=43812605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:41:0,84,1320:0,84,255:40,0 chr1 43814512 . A . PASS END=43814512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 43814514 . G . PASS END=43814514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 43814515 . T . PASS END=43814515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 43814516 . G . PASS END=43814516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 43814517 . C . LowGQ END=43814517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,449:10,0,255:13,0 chr1 43814518 . T . PASS END=43814520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 43814521 . A . PASS END=43814521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 43814522 . G . PASS END=43814523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 43814524 . C . PASS END=43814524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 43814525 . G . PASS END=43814526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr1 43814527 . C . PASS END=43814527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 43814528 . T . PASS END=43814528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 43814529 . C . PASS END=43814529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 43814530 . T . PASS END=43814533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,647:0,57,255:19,0 chr1 43814534 . G . PASS END=43814535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr1 43814536 . C . PASS END=43814536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 43814537 . C . PASS END=43814537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 43814538 . C . PASS END=43814538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:25,0 chr1 43814539 . G . PASS END=43814539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 43814540 . A . PASS END=43814540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:26,0 chr1 43814541 . G . PASS END=43814542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 43814543 . A . PASS END=43814543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,900:0,34,255:25,0 chr1 43814544 . G . PASS END=43814545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 43814546 . G . PASS END=43814550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:64:27:0,64,909:0,64,255:27,0 chr1 43814551 . T . PASS END=43814551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43814552 . G . PASS END=43814552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr1 43814553 . G . PASS END=43814556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 43814557 . T . PASS END=43814558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 43814559 . C . PASS END=43814559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:26,0 chr1 43814560 . G . PASS END=43814560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 43814561 . C . PASS END=43814562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1061:0,71,255:29,0 chr1 43814563 . C . PASS END=43814564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:52:30:0,52,1022:0,52,255:29,0 chr1 43814565 . C . PASS END=43814566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,1 chr1 43814567 . A . PASS END=43814567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:28,0 chr1 43814568 . T . PASS END=43814568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43814569 . C . PASS END=43814569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,0 chr1 43814570 . T . PASS END=43814570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,1 chr1 43814571 . C . PASS END=43814573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:41:31:0,41,1065:0,41,255:31,1 chr1 43814574 . T . PASS END=43814574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 43814575 . A . PASS END=43814575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:31,0 chr1 43814576 . C . PASS END=43814578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:33,0 chr1 43814579 . T . PASS END=43814579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,988:0,68,255:31,0 chr1 43814580 . T . PASS END=43814581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 43814582 . A . PASS END=43814584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1161:0,64,255:32,0 chr1 43814585 . G . PASS END=43814585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:32,0 chr1 43814586 . C . PASS END=43814586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:31,0 chr1 43814587 . T . PASS END=43814590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1166:0,83,255:33,0 chr1 43814591 . C . PASS END=43814591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:32,0 chr1 43814592 . G . PASS END=43814592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 43814593 . C . PASS END=43814593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:32,0 chr1 43814594 . C . PASS END=43814613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1213:0,99,255:34,0 chr1 43814614 . A . PASS END=43814614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 43814615 . C . PASS END=43814646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1186:0,86,255:35,0 chr1 43814647 . C . PASS END=43814657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,87,255:26,0 chr1 43814658 . A . PASS END=43814658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr1 43814659 . C . PASS END=43814673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,893:0,75,255:25,0 chr1 43814675 . T . PASS END=43814675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 43814934 . C . PASS END=43814950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1007:0,84,255:29,0 chr1 43814951 . A . PASS END=43814951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 43814952 . C . PASS END=43814970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1103:0,80,255:32,0 chr1 43814971 . G . PASS END=43814971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:28,0 chr1 43814972 . G . PASS END=43814979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 43814980 . C . PASS END=43814983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:25,0 chr1 43814984 . G . PASS END=43814984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 43814985 . T . PASS END=43815009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,68,255:26,0 chr1 43815010 . G . PASS END=43815010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 43815011 . C . PASS END=43815018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 43815019 . T . PASS END=43815019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 43815020 . G . PASS END=43815022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 43815023 . C . PASS END=43815030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 43815035 . C . PASS END=43815035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 43815508 . C . PASS END=43815515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:26,0 chr1 43815516 . A . PASS END=43815572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1149:0,86,255:36,0 chr1 43815573 . G . PASS END=43815573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 43815574 . C . PASS END=43815584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1286:0,89,255:35,0 chr1 43815585 . G . PASS END=43815621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 43815622 . T . PASS END=43815622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 43815623 . T . PASS END=43815633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 43817886 . G . PASS END=43817887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 43817888 . A . PASS END=43817888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 43817889 . G . PASS END=43817895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:25,0 chr1 43817896 . G . PASS END=43817896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 43817897 . C . PASS END=43817937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,909:0,62,255:26,0 chr1 43817938 . A . PASS END=43817938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 43817939 . G . PASS END=43817949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,970:0,67,255:26,0 chr1 43817950 . T . PASS END=43817950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:23,0 chr1 43817951 . A . PASS END=43817974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:25,0 chr1 43818189 . C . PASS END=43818194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 43818195 . G . PASS END=43818195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 43818196 . C . PASS END=43818201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:26,0 chr1 43818202 . T . PASS END=43818209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1186:0,84,255:31,0 chr1 43818210 . A . PASS END=43818210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 43818211 . C . PASS END=43818421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:31:0,90,1105:0,93,255:40,0 chr1 43818422 . A . PASS END=43818433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:30:0,75,1125:0,83,255:25,0 chr1 43818434 . G . PASS END=43818434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:25,0 chr1 43818435 . C . PASS END=43818438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:24,0 chr1 43818439 . C . PASS END=43818443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43818529 . C . PASS END=43818529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:17,0 chr1 43818613 . G . PASS END=43818613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 43818626 . G . PASS END=43818626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 43818647 . C . PASS END=43818647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:32,0 chr1 43818698 . C . PASS END=43818698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1211:0,56,255:34,0 chr1 43818769 . A . PASS END=43818769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,108,1620:0,119,255:35,0 chr1 43818843 . C . PASS END=43818843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 43819659 . A . PASS END=43819659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 43819794 . T . PASS END=43819794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:24,0 chr1 43819949 . G . PASS END=43819949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 43820117 . A . PASS END=43820117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 43824887 . A . PASS END=43824896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 43824897 . T . PASS END=43824898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 43824899 . G . PASS END=43824901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 43824902 . T . PASS END=43824903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 43824904 . C . PASS END=43824935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:19,0 chr1 43824936 . A . PASS END=43824940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 43824941 . C . PASS END=43824941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 43824942 . C . PASS END=43824946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,768:0,60,255:22,0 chr1 43824947 . C . PASS END=43824947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 43824948 . C . PASS END=43824953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 43824954 . C . PASS END=43824954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 43824955 . A . PASS END=43824971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 43824972 . A . PASS END=43824972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr1 43824973 . G . PASS END=43824975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 43824976 . C . PASS END=43824976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 43824977 . A . PASS END=43824977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 43824978 . A . PASS END=43824979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:22,0 chr1 43824980 . G . PASS END=43824983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 43824984 . A . PASS END=43824984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,923:0,50,255:24,0 chr1 43824985 . G . PASS END=43825018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,963:0,65,255:26,0 chr1 43825019 . G . PASS END=43825019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 43825020 . C . PASS END=43825026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,868:0,61,255:26,0 chr1 43825027 . C . PASS END=43825027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 43825028 . C . PASS END=43825037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:26,0 chr1 43825038 . G . PASS END=43825038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,853:0,26,255:24,0 chr1 43825039 . C . PASS END=43825055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,947:0,64,255:26,0 chr1 43825056 . G . PASS END=43825056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 43825057 . C . PASS END=43825067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 43825161 . G . PASS END=43825166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 43825167 . C . PASS END=43825172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 43825173 . C . PASS END=43825173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 43825174 . C . PASS END=43825262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,992:0,81,255:39,0 chr1 43825263 . T . PASS END=43825263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:31,0 chr1 43825264 . G . PASS END=43825309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1111:0,82,255:34,0 chr1 43825396 . G . PASS END=43825492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:39:0,90,1354:0,90,255:40,0 chr1 43825640 . G . PASS END=43825640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 43825641 . T . PASS END=43825641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 43825642 . T . PASS END=43825659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,653:0,41,255:19,0 chr1 43825660 . G . PASS END=43825663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 43825664 . T . PASS END=43825664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 43825665 . C . PASS END=43825676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:25,0 chr1 43825677 . G . PASS END=43825677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 43825678 . G . PASS END=43825678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 43825679 . C . PASS END=43825714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:28:0,84,1063:0,84,255:36,0 chr1 43825715 . T . PASS END=43825717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:36:0,75,1227:0,75,255:34,0 chr1 43825718 . C . PASS END=43825719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:36,0 chr1 43825720 . T . PASS END=43825720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1219:0,56,255:35,0 chr1 43825721 . C . PASS END=43825739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1217:0,89,255:36,0 chr1 43825740 . G . PASS END=43825740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:32,0 chr1 43825741 . G . PASS END=43825748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1241:0,86,255:34,0 chr1 43825749 . T . PASS END=43825749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1117:0,47,255:32,0 chr1 43825750 . G . PASS END=43825764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1227:0,86,255:34,0 chr1 43825765 . T . PASS END=43825765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1108:0,55,255:29,0 chr1 43825766 . A . PASS END=43825768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:33,0 chr1 43825864 . A . PASS END=43825868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 43825869 . A . PASS END=43825869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr1 43825870 . A . PASS END=43825872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1239:0,89,255:35,0 chr1 43825873 . T . PASS END=43825873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1230:0,72,255:33,0 chr1 43825874 . T . PASS END=43826060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:35:0,92,1286:0,92,255:40,0 chr1 43826170 . C . PASS END=43826264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:47:0,120,1800:0,141,255:40,0 chr1 43826404 . T . PASS END=43826409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 43826410 . A . PASS END=43826410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 43826411 . C . PASS END=43826630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1125:0,80,255:40,0 chr1 43826631 . A . PASS END=43826632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr1 43826791 . G . PASS END=43826797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1008:0,68,255:26,0 chr1 43826798 . C . PASS END=43826808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:29,0 chr1 43826809 . T . PASS END=43826809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 43826810 . G . PASS END=43826813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 43826814 . G . PASS END=43826814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 43826815 . T . PASS END=43826832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1219:0,89,255:35,0 chr1 43826833 . G . PASS END=43826833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:32,0 chr1 43826834 . G . PASS END=43826845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 43826846 . G . PASS END=43826847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1304:0,72,255:35,1 chr1 43826848 . G . PASS END=43826885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1144:0,83,255:35,0 chr1 43826886 . C . PASS END=43826916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:26,0 chr1 43827866 . G . PASS END=43827876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:25,0 chr1 43827877 . C . PASS END=43827883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 43827884 . T . PASS END=43827890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 43827891 . A . PASS END=43827964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1119:0,90,255:36,0 chr1 43827965 . A . PASS END=43827966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1048:0,57,255:29,0 chr1 43827967 . G . PASS END=43827967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 43827968 . G . PASS END=43827968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 43827969 . T . PASS END=43827972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43827973 . T . PASS END=43827983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 43828622 . G . PASS END=43828624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 43828625 . A . PASS END=43828625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 43828626 . C . PASS END=43828786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1208:0,83,255:40,0 chr1 43828787 . A . PASS END=43828787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43828788 . A . PASS END=43828788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43828789 . G . PASS END=43828789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 43828790 . G . PASS END=43828790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43828791 . C . PASS END=43828792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:25,0 chr1 43828793 . T . PASS END=43828794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 43828795 . C . PASS END=43828798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:22,0 chr1 43828799 . G . PASS END=43828800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:19,0 chr1 43829587 . T . PASS END=43829587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 43829588 . C . PASS END=43829593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:23,0 chr1 43829594 . G . PASS END=43829595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 43829596 . C . PASS END=43829596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 43829597 . T . PASS END=43829603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 43829604 . T . PASS END=43829604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 43829605 . G . PASS END=43829610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 43829611 . A . PASS END=43829611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1030:0,66,255:30,0 chr1 43829612 . C . PASS END=43829668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1119:0,82,255:39,0 chr1 43829669 . T . PASS END=43829669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1473:0,71,255:37,0 chr1 43829670 . G . PASS END=43829808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:40:0,92,1437:0,92,255:40,0 chr1 43829995 . C . PASS END=43830131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,119,1462:0,119,255:40,0 chr1 43830213 . C . PASS END=43830318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1233:0,89,255:40,0 chr1 43830409 . T . PASS END=43830465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,120,1800:0,123,255:40,0 chr1 43830599 . C . PASS END=43830600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 43830601 . T . PASS END=43830601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:31,0 chr1 43830602 . A . PASS END=43830679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:35:0,102,1327:0,102,255:40,0 chr1 43830857 . C . PASS END=43830861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43830862 . A . PASS END=43831047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1215:0,84,255:40,0 chr1 43831235 . C . PASS END=43831280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,135,255:40,0 chr1 43850121 . T . PASS END=43850126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1039:0,71,255:26,0 chr1 43850127 . G . PASS END=43850132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 43850133 . C . PASS END=43850133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 43850134 . A . PASS END=43850135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43850136 . G . PASS END=43850136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 43850137 . T . PASS END=43850138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43850139 . G . PASS END=43850139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 43850140 . G . PASS END=43850140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43850141 . C . PASS END=43850141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 43850142 . A . PASS END=43850142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:26:29:0,26,963:0,26,255:27,2 chr1 43850143 . T . PASS END=43850143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:29,0 chr1 43850144 . T . PASS END=43850167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1093:0,83,255:33,0 chr1 43850168 . G . PASS END=43850168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 43850169 . C . PASS END=43850173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 43850174 . T . PASS END=43850175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr1 43850176 . A . PASS END=43850177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 43850178 . C . PASS END=43850178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43850179 . T . PASS END=43850181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43850182 . C . PASS END=43850184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43850185 . C . PASS END=43850188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43850189 . G . PASS END=43850220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,850:0,62,255:26,0 chr1 43850221 . G . PASS END=43850221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,884:0,47,255:24,0 chr1 43850222 . G . PASS END=43850223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 43850713 . T . PASS END=43850777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,117,1755:0,118,255:40,0 chr1 43851649 . C . PASS END=43851652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:18,0 chr1 43851653 . T . PASS END=43851653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 43851654 . T . PASS END=43851665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr1 43851666 . G . PASS END=43851672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:25,0 chr1 43851673 . G . PASS END=43851705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr1 43851706 . G . PASS END=43851706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 43851707 . A . PASS END=43851713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43851714 . G . PASS END=43851716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43851717 . A . PASS END=43851725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43851726 . T . PASS END=43851761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,71,255:26,0 chr1 43851762 . G . PASS END=43851763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43851764 . T . PASS END=43851766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 43851767 . T . PASS END=43851777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 43851778 . C . PASS END=43851780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43851781 . G . PASS END=43851811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1181:0,83,255:33,0 chr1 43851812 . A . PASS END=43851822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:30:0,75,1125:0,82,255:26,0 chr1 43851823 . C . PASS END=43851834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 43851835 . C . PASS END=43851835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 43851836 . A . PASS END=43851848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 43851849 . A . PASS END=43851849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43851850 . A . PASS END=43851861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43851862 . C . PASS END=43851862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 43851863 . T . PASS END=43851864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43851865 . T . PASS END=43851889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,906:0,62,255:25,0 chr1 43851890 . C . PASS END=43851890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 43851891 . C . PASS END=43851892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43851893 . G . PASS END=43851893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 43851894 . A . PASS END=43851897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 43852260 . C . PASS END=43852341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,180,255:40,0 chr1 43852529 . C . PASS END=43852668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:35:0,84,1260:0,97,255:40,0 chr1 43852669 . G . PASS END=43852669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 43853174 . C . PASS END=43853299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:38:0,88,1321:0,88,255:40,0 chr1 43853300 . G . PASS END=43853318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:26:0,60,900:0,78,255:26,0 chr1 43853981 . C . PASS END=43854096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:41:0,87,1305:0,116,255:40,0 chr1 43854097 . T . PASS END=43854097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1345:0,76,255:28,0 chr1 43854098 . C . PASS END=43854099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:38:0,87,1305:0,98,255:29,0 chr1 43855430 . C . PASS END=43855435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 43855636 . T . PASS END=43855636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 43855640 . A . PASS END=43855640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43855641 . T . PASS END=43855645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:18,0 chr1 43855646 . T . PASS END=43855646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,647:0,32,255:17,0 chr1 43855647 . C . PASS END=43855666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 43859710 . A . PASS END=43859772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,99,1637:0,99,255:40,0 chr1 43868848 . G . PASS END=43868973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1260:0,89,255:40,0 chr1 43869272 . C . PASS END=43869275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 43869276 . A . PASS END=43869277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 43869278 . T . PASS END=43869280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43869281 . G . PASS END=43869287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 43869288 . A . PASS END=43869288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:27,0 chr1 43869289 . A . PASS END=43869308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:34,0 chr1 43869309 . T . PASS END=43869309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:32,0 chr1 43869310 . G . PASS END=43869319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1225:0,86,255:35,0 chr1 43869320 . T . PASS END=43869320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:33,0 chr1 43869321 . G . PASS END=43869416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1202:0,83,255:40,0 chr1 43869417 . T . PASS END=43869429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,1000:0,68,255:26,0 chr1 43869430 . A . PASS END=43869430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 43869431 . T . PASS END=43869432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 43869433 . T . PASS END=43869433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 43869434 . A . PASS END=43869436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 43869437 . G . PASS END=43869437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:22,0 chr1 43869438 . G . PASS END=43869438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 43869439 . C . PASS END=43869439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 43869440 . A . PASS END=43869443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 43869444 . T . PASS END=43869444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 43869445 . G . PASS END=43869445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 43870051 . G . PASS END=43870092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,742:0,66,255:25,0 chr1 43870093 . G . PASS END=43870101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 43870102 . C . PASS END=43870105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 43870106 . G . PASS END=43870107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 43870108 . T . PASS END=43870108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 43870109 . T . PASS END=43870150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1102:0,87,255:30,0 chr1 43870151 . T . PASS END=43870172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 43870173 . T . PASS END=43870174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 43870175 . T . PASS END=43870181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 43870182 . C . PASS END=43870182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 43870183 . C . PASS END=43870195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43870196 . C . PASS END=43870214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,570:0,51,255:17,0 chr1 43870215 . C . PASS END=43870215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 43870216 . C . PASS END=43870221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,621:0,51,255:17,0 chr1 43872132 . A . PASS END=43872173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,202,255:40,0 chr1 43880753 . G . PASS END=43880753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 43880754 . T . PASS END=43880754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 43880755 . G . PASS END=43880756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 43880757 . T . PASS END=43880757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,813:0,33,255:23,0 chr1 43880758 . G . PASS END=43880758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 43880759 . G . PASS END=43880760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43880761 . A . PASS END=43880761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 43880762 . C . PASS END=43880769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1147:0,87,255:31,0 chr1 43880770 . C . PASS END=43880770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 43880771 . C . PASS END=43880771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1333:0,105,255:35,0 chr1 43880772 . T . PASS END=43880772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1166:0,75,255:34,0 chr1 43880773 . C . PASS END=43880809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1258:0,91,255:39,0 chr1 43880810 . A . PASS END=43880810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1388:0,76,255:36,0 chr1 43880811 . T . PASS END=43880871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:85:34:0,85,1172:0,85,255:40,0 chr1 43880872 . T . PASS END=43880872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:29,0 chr1 43880873 . C . PASS END=43880884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:30,0 chr1 43880888 . T . PASS END=43880888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 43881631 . G . PASS END=43881746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1124:0,92,255:40,0 chr1 43881747 . G . PASS END=43881759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:28:0,72,1080:0,84,255:26,0 chr1 43881760 . A . PASS END=43881769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,67,255:19,0 chr1 43881770 . C . PASS END=43881770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:16,0 chr1 43881771 . A . PASS END=43881772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:16,0 chr1 43881777 . G . PASS END=43881777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 43882206 . G . PASS END=43882278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:42:0,85,1452:0,85,255:40,0 chr1 43882279 . T . PASS END=43882279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:56:50:0,56,1645:0,56,255:40,0 chr1 43882280 . C . PASS END=43882312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1260:0,89,255:40,0 chr1 43885402 . C . PASS END=43885402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43885404 . G . PASS END=43885413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:19,0 chr1 43885414 . G . PASS END=43885416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,618:0,63,255:22,0 chr1 43885417 . T . PASS END=43885418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,828:0,53,255:19,0 chr1 43885419 . C . PASS END=43885422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 43885423 . T . PASS END=43885423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:21,0 chr1 43885424 . A . PASS END=43885426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 43885427 . A . PASS END=43885432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 43885433 . G . PASS END=43885442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:22,0 chr1 43885443 . T . PASS END=43885443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 43885444 . G . PASS END=43885451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,900:0,65,255:26,0 chr1 43885452 . T . PASS END=43885468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 43885469 . T . PASS END=43885469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 43885470 . C . PASS END=43885477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 43885478 . T . PASS END=43885478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 43885479 . G . PASS END=43885588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:32:0,87,1194:0,87,255:40,0 chr1 43885589 . A . PASS END=43885589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1472:0,74,255:37,0 chr1 43885590 . A . PASS END=43885606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:38:0,83,1343:0,83,255:37,0 chr1 43885607 . A . PASS END=43885607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:34,0 chr1 43885608 . T . PASS END=43885630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1272:0,94,255:36,0 chr1 43885823 . G . PASS END=43885830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:33,0 chr1 43885831 . G . PASS END=43885831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:33,0 chr1 43885832 . C . PASS END=43885938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:34:0,80,1144:0,80,255:40,0 chr1 43885939 . T . PASS END=43885955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:24:0,69,1035:0,72,255:25,0 chr1 43885956 . G . PASS END=43885975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,54,255:18,0 chr1 43885976 . G . PASS END=43885977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:37:18:0,37,585:0,37,255:14,0 chr1 43885978 . G . PASS END=43885978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 43885979 . G . PASS END=43885994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,466:0,39,255:13,0 chr1 43886420 . G . PASS END=43886461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:34,0 chr1 43886462 . A . PASS END=43886462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:32,0 chr1 43886463 . C . PASS END=43886654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1263:0,89,255:40,0 chr1 43886659 . G . PASS END=43886659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 43886845 . C . PASS END=43886845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 43886846 . A . PASS END=43886951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:27:0,80,914:0,80,255:40,0 chr1 43886952 . T . PASS END=43886955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 43886956 . T . PASS END=43886956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:22,0 chr1 43886957 . C . PASS END=43886964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:22,0 chr1 43886965 . C . PASS END=43886974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,66,255:19,0 chr1 43887754 . G . PASS END=43887877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,87,255:40,0 chr1 43887878 . T . PASS END=43887896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr1 43888151 . A . PASS END=43888167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 43888168 . T . PASS END=43888172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43888173 . A . PASS END=43888173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 43888174 . C . PASS END=43888258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1041:0,87,255:39,0 chr1 43888259 . C . PASS END=43888259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:29,0 chr1 43888260 . T . PASS END=43888270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1202:0,86,255:32,0 chr1 43888271 . C . PASS END=43888271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 43888272 . G . PASS END=43888272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:28,0 chr1 43888273 . A . PASS END=43888273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:28,0 chr1 43888274 . G . PASS END=43888277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:33:0,84,1233:0,86,255:28,0 chr1 43888278 . T . PASS END=43888280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:27,0 chr1 43888281 . T . PASS END=43888281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:27,0 chr1 43888282 . C . PASS END=43888282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:26,0 chr1 43888283 . T . PASS END=43888283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:26,0 chr1 43888284 . T . PASS END=43888284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:25,0 chr1 43888285 . A . PASS END=43888285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:26,0 chr1 43888286 . T . PASS END=43888286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 43888287 . G . PASS END=43888287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,986:0,13,255:26,0 chr1 43888288 . T . PASS END=43888288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:26,0 chr1 43888289 . T . PASS END=43888291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 43888292 . G . PASS END=43888294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr1 43888295 . G . PASS END=43888295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 43888296 . C . PASS END=43888296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,819:0,28,255:21,0 chr1 43888297 . T . PASS END=43888297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,939:0,53,255:22,0 chr1 43888298 . C . PASS END=43888300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:23,0 chr1 43888301 . C . PASS END=43888301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:21,0 chr1 43888302 . A . PASS END=43888303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:22,0 chr1 43888434 . C . PASS END=43888434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 43888440 . T . PASS END=43888440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43888441 . G . PASS END=43888491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,62,255:25,0 chr1 43888492 . G . PASS END=43888494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 43888495 . C . PASS END=43888495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:26,0 chr1 43888496 . C . PASS END=43888502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43888503 . G . PASS END=43888542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 43888543 . G . PASS END=43888554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,53,255:20,0 chr1 43888767 . C . PASS END=43888767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 43888770 . A . PASS END=43888782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 43888783 . T . PASS END=43888874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr1 43888875 . G . PASS END=43888891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 43888892 . C . PASS END=43888905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 43888906 . C . PASS END=43888907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 43888908 . G . PASS END=43888912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43888913 . G . PASS END=43888929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 43888930 . T . PASS END=43888940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 43888941 . C . PASS END=43888973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 43888974 . A . PASS END=43888974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr1 43888975 . A . PASS END=43888981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 43888982 . C . PASS END=43888984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 43888985 . C . PASS END=43888985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 43888986 . A . PASS END=43888987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 43889884 . C . PASS END=43889884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 43889888 . G . PASS END=43889888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 43889889 . T . PASS END=43889889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 43889890 . A . PASS END=43889900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 43889901 . C . PASS END=43889904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43889905 . T . PASS END=43889910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr1 43889911 . A . PASS END=43889917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 43889918 . A . PASS END=43889918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 43889919 . C . PASS END=43889955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:23,0 chr1 43889956 . C . PASS END=43889966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 43889967 . G . PASS END=43889978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 43889979 . T . PASS END=43889979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 43889980 . C . PASS END=43890000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:23,0 chr1 43890001 . C . PASS END=43890001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 43890002 . C . PASS END=43890016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 43890017 . T . PASS END=43890017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 43890018 . C . PASS END=43890024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 43890025 . G . PASS END=43890029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,851:0,56,255:19,0 chr1 43890030 . T . PASS END=43890030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 43890031 . G . PASS END=43890032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 43890033 . A . PASS END=43890033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43890034 . G . PASS END=43890037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 43890038 . C . PASS END=43890038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:16,0 chr1 43890039 . C . PASS END=43890049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:19:0,42,630:0,53,255:16,0 chr1 43890050 . G . PASS END=43890051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 43890052 . C . PASS END=43890052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 43890053 . C . PASS END=43890089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 43890090 . T . PASS END=43890090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 43890091 . C . PASS END=43890100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 43890101 . T . PASS END=43890101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 43890102 . G . PASS END=43890103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 43890455 . A . PASS END=43890533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:49:0,120,1800:0,134,255:40,0 chr1 43890784 . A . PASS END=43890878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,89,255:40,0 chr1 43891142 . T . PASS END=43891142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 43891145 . C . PASS END=43891146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 43891147 . T . PASS END=43891147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:31,0 chr1 43891148 . C . PASS END=43891313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:36:0,91,1274:0,91,255:40,0 chr1 43891506 . C . PASS END=43891608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1196:0,89,255:39,0 chr1 43891609 . G . PASS END=43891616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 43891617 . G . PASS END=43891617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 43891618 . A . PASS END=43891619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 43891620 . G . PASS END=43891620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:26,0 chr1 43891635 . C . PASS END=43891635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr1 43891704 . C . PASS END=43891704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 43891709 . G . PASS END=43891721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,99,1485:0,105,255:38,0 chr1 43891722 . A . PASS END=43891722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 43891723 . G . PASS END=43891739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,111,1665:0,117,255:40,0 chr1 43891740 . T . PASS END=43891740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:49:44:0,49,1189:0,49,255:38,0 chr1 43891741 . G . PASS END=43891822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:39:0,90,1350:0,97,255:40,0 chr1 43892039 . A . PASS END=43892040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,676:0,43,255:19,0 chr1 43892041 . C . PASS END=43892047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:21,0 chr1 43892048 . G . PASS END=43892049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 43892050 . G . PASS END=43892050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 43892051 . T . PASS END=43892067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 43892068 . T . PASS END=43892068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:19,0 chr1 43892069 . C . PASS END=43892072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 43892073 . T . PASS END=43892073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 43892074 . C . PASS END=43892080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:23,0 chr1 43892081 . A . PASS END=43892081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:19,0 chr1 43892082 . C . PASS END=43892123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,800:0,64,255:26,0 chr1 43892124 . G . PASS END=43892131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:29,0 chr1 43892132 . A . PASS END=43892132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 43892133 . C . PASS END=43892150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,959:0,84,255:29,0 chr1 43892151 . C . PASS END=43892151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 43892152 . C . PASS END=43892153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43892154 . C . PASS END=43892185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,68,255:25,0 chr1 43892186 . T . PASS END=43892186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 43892187 . G . PASS END=43892209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,845:0,69,255:23,0 chr1 43892381 . T . PASS END=43892381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43892386 . G . PASS END=43892393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 43892394 . G . PASS END=43892394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1033:0,63,255:28,0 chr1 43892395 . G . PASS END=43892480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:31:0,90,1294:0,92,255:39,0 chr1 43892724 . C . PASS END=43892724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43892727 . A . PASS END=43892727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 43892728 . G . PASS END=43892755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,879:0,72,255:26,0 chr1 43892756 . T . PASS END=43892768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr1 43892769 . C . PASS END=43892769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 43892770 . A . PASS END=43892840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1176:0,83,255:35,0 chr1 43892841 . A . PASS END=43892850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr1 43892952 . A . PASS END=43892952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:20,0 chr1 43892953 . T . PASS END=43892954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:23,0 chr1 43892955 . T . PASS END=43892955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 43892956 . C . PASS END=43892959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:26,0 chr1 43892960 . C . PASS END=43892971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:32,0 chr1 43892972 . T . PASS END=43892972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr1 43892973 . G . PASS END=43893111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:32:0,86,1188:0,86,255:40,0 chr1 43893112 . T . PASS END=43893116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr1 43893122 . G . PASS END=43893122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 43893201 . A . PASS END=43893220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 43893221 . G . PASS END=43893224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 43893225 . T . PASS END=43893226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 43893227 . A . PASS END=43893235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43893236 . T . PASS END=43893236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 43893237 . T . PASS END=43893239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 43893240 . G . PASS END=43893240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:27,0 chr1 43893241 . T . PASS END=43893241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 43893242 . C . PASS END=43893245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43893246 . A . PASS END=43893261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,986:0,70,255:26,0 chr1 43893262 . T . PASS END=43893262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 43893263 . G . PASS END=43893273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr1 43893274 . T . PASS END=43893275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 43893276 . C . PASS END=43893285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr1 43893286 . G . PASS END=43893286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 43893287 . A . PASS END=43893289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 43893290 . G . PASS END=43893320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 43893321 . A . PASS END=43893321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 43893322 . C . PASS END=43893322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 43893323 . A . PASS END=43893330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 43893331 . C . PASS END=43893332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 43893333 . G . PASS END=43893333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 43893334 . T . PASS END=43893334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 43893335 . T . PASS END=43893335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 43893336 . C . PASS END=43893345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 43893346 . G . PASS END=43893346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 43893347 . C . PASS END=43893357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 43893358 . A . PASS END=43893363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 43893364 . T . PASS END=43893364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr1 43893365 . G . PASS END=43893368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 43893369 . T . PASS END=43893370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 43893371 . C . PASS END=43893382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 43893383 . G . PASS END=43893405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr1 43893674 . G . PASS END=43893680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr1 43893681 . T . PASS END=43893681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:23,0 chr1 43893682 . T . PASS END=43893701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,870:0,72,255:24,0 chr1 43893702 . T . PASS END=43893702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:21,0 chr1 43893703 . C . PASS END=43893720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,870:0,72,255:25,0 chr1 43893721 . C . PASS END=43893722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,868:0,58,255:22,0 chr1 43893723 . C . PASS END=43893724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 43893725 . G . PASS END=43893725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:20,0 chr1 43893726 . T . PASS END=43893729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 43893730 . A . PASS END=43893730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,815:0,23,255:20,0 chr1 43893731 . G . PASS END=43893737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 43893738 . G . PASS END=43893738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 43893739 . C . PASS END=43893744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 43893745 . A . PASS END=43893765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 43893766 . A . PASS END=43893766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 43893767 . T . PASS END=43893772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:16,0 chr1 43893773 . G . PASS END=43893773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 43893774 . C . PASS END=43893785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 43893786 . C . PASS END=43893786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 43893787 . G . PASS END=43893789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 43893911 . G . PASS END=43894058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:31:0,80,1185:0,80,255:40,0 chr1 43894059 . A . PASS END=43894078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,77,255:26,0 chr1 43894079 . T . PASS END=43894081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:27:0,54,810:0,81,255:19,0 chr1 43894082 . G . PASS END=43894090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:23,0 chr1 43894091 . C . PASS END=43894091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 43894092 . C . PASS END=43894117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,878:0,69,255:24,0 chr1 43894118 . C . PASS END=43894118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 43894119 . T . PASS END=43894122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 43894123 . C . PASS END=43894123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43894124 . C . PASS END=43894132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 43894133 . G . PASS END=43894157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,607:0,44,255:17,0 chr1 43894161 . A . PASS END=43894161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 43895374 . C . PASS END=43895374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 43895375 . A . PASS END=43895414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,707:0,60,255:26,0 chr1 43895415 . C . PASS END=43895424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 43895425 . T . PASS END=43895436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 43895437 . C . PASS END=43895442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 43895443 . G . PASS END=43895450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,884:0,61,255:26,0 chr1 43895451 . T . PASS END=43895452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 43895453 . T . PASS END=43895453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 43895454 . C . PASS END=43895460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:29,0 chr1 43895461 . A . PASS END=43895493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 43895494 . T . PASS END=43895494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 43895495 . G . PASS END=43895499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:21,0 chr1 43895500 . T . PASS END=43895500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 43895501 . C . PASS END=43895502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 43895503 . T . PASS END=43895503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 43895504 . A . PASS END=43895506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 43895507 . G . PASS END=43895507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr1 43895508 . T . PASS END=43895508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:19,0 chr1 43895509 . C . PASS END=43895513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 43895514 . A . PASS END=43895514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 43895515 . G . PASS END=43895515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43895679 . C . PASS END=43895679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1649:0,105,255:40,0 chr1 43895682 . G . PASS END=43895774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,126,255:40,0 chr1 43895982 . G . PASS END=43896060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,137,255:40,0 chr1 43896064 . T . PASS END=43896064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 43896167 . G . PASS END=43896170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:28,0 chr1 43896171 . C . PASS END=43896189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 43896190 . G . PASS END=43896195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 43896196 . G . PASS END=43896202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,962:0,67,255:26,0 chr1 43896203 . A . PASS END=43896218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1033:0,87,255:29,0 chr1 43896219 . A . PASS END=43896219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 43896220 . G . PASS END=43896221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 43896222 . A . PASS END=43896222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 43896223 . T . PASS END=43896223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 43896224 . A . PASS END=43896224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 43896225 . C . PASS END=43896240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1084:0,87,255:30,0 chr1 43896241 . T . PASS END=43896267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:28,0 chr1 43896268 . T . PASS END=43896268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 43896269 . C . PASS END=43896270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 43896271 . G . PASS END=43896271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 43896272 . C . PASS END=43896279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,876:0,69,255:23,0 chr1 43896280 . T . PASS END=43896282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 43896283 . G . PASS END=43896292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 43896293 . C . PASS END=43896295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43896296 . T . PASS END=43896296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 43896297 . G . PASS END=43896299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43896300 . T . PASS END=43896346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,886:0,64,255:26,0 chr1 43896347 . G . PASS END=43896347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 43896348 . G . PASS END=43896354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 43896355 . A . PASS END=43896355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:18,0 chr1 43896356 . G . PASS END=43896356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 43896357 . C . PASS END=43896368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 43896369 . C . PASS END=43896376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43896377 . C . PASS END=43896380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 43896381 . C . PASS END=43896381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:16,0 chr1 43896382 . T . PASS END=43896410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,651:0,51,255:19,0 chr1 43896411 . A . PASS END=43896420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 43896421 . C . PASS END=43896452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,621:0,51,255:17,0 chr1 43896453 . C . PASS END=43896453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 43896454 . T . PASS END=43896460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 43896620 . G . PASS END=43896626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 43896627 . G . PASS END=43896632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:23,0 chr1 43896633 . C . PASS END=43896633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 43896634 . A . PASS END=43896651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:24,0 chr1 43896652 . G . PASS END=43896652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 43896653 . T . PASS END=43896670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,868:0,62,255:26,0 chr1 43896671 . T . PASS END=43896697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 43896698 . T . PASS END=43896698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 43896699 . C . PASS END=43896713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 43896714 . G . PASS END=43896714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 43896715 . C . PASS END=43896719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 43896720 . G . PASS END=43896720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 43896721 . G . PASS END=43896721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43896722 . A . PASS END=43896722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 43896723 . A . PASS END=43896727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43896728 . A . PASS END=43896729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43896730 . C . PASS END=43896730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43896731 . T . PASS END=43896747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 43896748 . C . PASS END=43896761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,57,255:19,0 chr1 43896936 . G . PASS END=43896968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr1 43896969 . A . PASS END=43896970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 43896971 . C . PASS END=43896977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 43896978 . G . PASS END=43896980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 43896981 . G . PASS END=43897001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 43897002 . T . PASS END=43897002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 43897003 . G . PASS END=43897023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 43897024 . C . PASS END=43897027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 43897028 . C . PASS END=43897028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 43897029 . C . PASS END=43897032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr1 43897033 . G . PASS END=43897039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 43897040 . A . PASS END=43897043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 43897129 . A . PASS END=43897129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 43897131 . G . PASS END=43897135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,553:0,48,255:18,0 chr1 43897136 . C . PASS END=43897136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 43897137 . A . PASS END=43897137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 43897138 . G . PASS END=43897141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 43897142 . T . PASS END=43897142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:18,0 chr1 43897143 . A . PASS END=43897147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 43897148 . A . PASS END=43897148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 43897149 . T . PASS END=43897151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 43897152 . G . PASS END=43897152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 43897153 . G . PASS END=43897154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 43897155 . C . PASS END=43897155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 43897156 . A . PASS END=43897165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 43897166 . G . PASS END=43897166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 43897167 . A . PASS END=43897167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43897168 . C . PASS END=43897194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,629:0,43,255:19,0 chr1 43897196 . T . PASS END=43897196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 43897198 . A . PASS END=43897198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:14,0 chr1 43897387 . A . PASS END=43897391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,560:0,51,255:17,0 chr1 43897392 . C . PASS END=43897392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 43897393 . T . PASS END=43897403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,568:0,51,255:19,0 chr1 43897404 . A . PASS END=43897405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43897406 . A . PASS END=43897406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 43897407 . T . PASS END=43897411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 43897412 . T . PASS END=43897429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr1 43897430 . G . PASS END=43897441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:24,0 chr1 43897442 . C . PASS END=43897442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 43897443 . A . PASS END=43897447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 43897448 . G . PASS END=43897572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:32:0,85,1305:0,85,255:40,0 chr1 43897943 . G . PASS END=43898055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1011:0,80,255:39,0 chr1 43898056 . A . PASS END=43898060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43898061 . C . PASS END=43898063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 43898064 . G . PASS END=43898087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:24:0,66,990:0,68,255:26,0 chr1 43898088 . G . PASS END=43898088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 43898089 . G . PASS END=43898100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 43898101 . C . PASS END=43898110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,701:0,49,255:19,0 chr1 43898188 . A . PASS END=43898188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 43898189 . C . PASS END=43898192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 43898193 . G . PASS END=43898214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 43898215 . G . PASS END=43898223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 43898224 . G . PASS END=43898241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 43898242 . C . PASS END=43898242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43898243 . C . PASS END=43898250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 43898251 . A . PASS END=43898275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 43898399 . G . PASS END=43898420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 43898421 . G . PASS END=43898421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43898422 . G . PASS END=43898438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 43898439 . C . PASS END=43898439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 43898440 . A . PASS END=43898448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 43898449 . A . PASS END=43898467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:24,0 chr1 43898468 . T . PASS END=43898470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,758:0,50,255:19,0 chr1 43898660 . G . PASS END=43898797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:35:0,87,1233:0,87,255:40,0 chr1 43898798 . T . PASS END=43898798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1729:0,78,255:40,0 chr1 43898799 . G . PASS END=43898834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:39:0,81,1215:0,117,255:40,0 chr1 43898835 . C . PASS END=43898835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:63:39:0,63,945:0,117,255:21,0 chr1 43898836 . C . PASS END=43898840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 43898841 . G . PASS END=43898841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 43898842 . G . PASS END=43898861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:18,0 chr1 43900057 . G . PASS END=43900060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 43900061 . C . PASS END=43900061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 43900062 . T . PASS END=43900102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,931:0,72,255:26,0 chr1 43900103 . C . PASS END=43900103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 43900104 . T . PASS END=43900137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,886:0,72,255:25,0 chr1 43900138 . C . PASS END=43900138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 43900139 . T . PASS END=43900142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 43900143 . G . PASS END=43900156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:19,0 chr1 43900871 . C . PASS END=43900978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:95:33:0,95,1266:0,95,255:40,0 chr1 43900979 . C . PASS END=43900979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:32,0 chr1 43900980 . G . PASS END=43900990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,97,255:32,0 chr1 43900991 . C . PASS END=43901000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,990:0,81,255:26,0 chr1 43901005 . G . PASS END=43901005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43902842 . A . PASS END=43902850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,922:0,72,255:26,0 chr1 43902851 . C . PASS END=43902863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,992:0,81,255:32,0 chr1 43902864 . T . PASS END=43902866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1209:0,63,255:32,0 chr1 43902867 . G . PASS END=43902980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1144:0,89,255:40,0 chr1 43902981 . G . PASS END=43902986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:31:0,78,1170:0,89,255:26,0 chr1 43902987 . C . PASS END=43902987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 43902988 . T . PASS END=43902988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 43902989 . C . PASS END=43902994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 43903077 . C . PASS END=43903179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:36:0,96,1530:0,96,255:40,0 chr1 43903182 . A . PASS END=43903182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 43903185 . T . PASS END=43903185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 43903260 . T . PASS END=43903260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 43903266 . G . PASS END=43903371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:36:0,96,1402:0,98,255:40,0 chr1 43903462 . G . PASS END=43903573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:40:0,96,1440:0,114,255:40,0 chr1 43903577 . A . PASS END=43903577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1350:0,123,255:30,0 chr1 43903581 . C . PASS END=43903581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:41:0,93,1395:0,123,255:31,0 chr1 43904370 . G . PASS END=43904395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1159:0,85,255:35,0 chr1 43904396 . C . PASS END=43904396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1119:0,50,255:32,0 chr1 43904397 . G . PASS END=43904397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 43904398 . A . PASS END=43904398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1180:0,53,255:32,0 chr1 43904399 . G . PASS END=43904401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1311:0,97,255:36,0 chr1 43904402 . C . PASS END=43904402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:34,0 chr1 43904403 . T . PASS END=43904404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 43904405 . T . PASS END=43904405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:32,0 chr1 43904406 . G . PASS END=43904421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:38,0 chr1 43904422 . G . PASS END=43904422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr1 43904423 . G . PASS END=43904438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:37,0 chr1 43904439 . T . PASS END=43904439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:33,0 chr1 43904440 . C . PASS END=43904448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1275:0,84,255:35,0 chr1 43904449 . G . PASS END=43904449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:32,0 chr1 43904450 . C . PASS END=43904457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:33,0 chr1 43904458 . G . PASS END=43904458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 43904459 . A . PASS END=43904464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:31,0 chr1 43904465 . A . PASS END=43904480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:29:0,72,1080:0,80,255:26,0 chr1 43904481 . A . PASS END=43904482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43904483 . G . PASS END=43904483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 43904484 . T . PASS END=43904486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 43904487 . A . PASS END=43904487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43904488 . G . PASS END=43904488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 43904597 . C . PASS END=43904597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 43904600 . T . PASS END=43904609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1036:0,90,255:30,0 chr1 43904610 . C . PASS END=43904610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 43904611 . C . PASS END=43904677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1149:0,80,255:35,0 chr1 43904678 . G . PASS END=43904678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:30,0 chr1 43904679 . C . PASS END=43904686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,89,255:32,0 chr1 43904687 . T . PASS END=43904687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 43904688 . G . PASS END=43904693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,91,255:31,0 chr1 43904694 . T . PASS END=43904694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:29,0 chr1 43904695 . A . PASS END=43904697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,95,255:30,0 chr1 43904698 . G . PASS END=43904698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:30,0 chr1 43904699 . C . PASS END=43904710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 43904711 . A . PASS END=43904712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 43904713 . C . PASS END=43904716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 43904717 . C . PASS END=43904717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1162:0,61,255:29,0 chr1 43904718 . T . PASS END=43904722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:30,0 chr1 43904723 . T . PASS END=43904723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,899:0,43,255:26,0 chr1 43904724 . C . PASS END=43904732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:29,0 chr1 43904733 . A . PASS END=43904756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,814:0,63,255:24,0 chr1 43904757 . A . PASS END=43904757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 43904758 . C . PASS END=43904764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 43905026 . C . PASS END=43905026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43905029 . C . PASS END=43905101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1194:0,83,255:35,0 chr1 43905102 . C . PASS END=43905111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,77,255:26,0 chr1 43905112 . A . PASS END=43905112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,822:0,51,255:21,0 chr1 43905113 . G . PASS END=43905113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 43905118 . G . PASS END=43905118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 43905276 . G . PASS END=43905337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,327:0,30,255:13,0 chr1 43905338 . T . PASS END=43905338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 43905339 . G . PASS END=43905339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 43905340 . G . PASS END=43905391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,587:0,41,255:19,0 chr1 43905392 . C . PASS END=43905407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 43905408 . T . PASS END=43905408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 43905409 . C . PASS END=43905440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr1 43905445 . G . PASS END=43905445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43905552 . C . PASS END=43905570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,986:0,78,255:26,0 chr1 43905571 . G . PASS END=43905571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 43905572 . C . PASS END=43905575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,937:0,65,255:25,0 chr1 43905576 . G . PASS END=43905577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43905578 . T . PASS END=43905580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43905581 . G . PASS END=43905591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:28,0 chr1 43905592 . A . PASS END=43905592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 43905593 . A . PASS END=43905598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 43905599 . A . PASS END=43905609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:26,0 chr1 43905610 . T . PASS END=43905613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 43905614 . C . PASS END=43905616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43905617 . C . PASS END=43905656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1031:0,81,255:35,0 chr1 43905657 . C . PASS END=43905657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:29,0 chr1 43905658 . C . PASS END=43905679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 43905680 . C . PASS END=43905680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 43905681 . T . PASS END=43905691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 43905692 . T . PASS END=43905692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 43905693 . C . PASS END=43905696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:30,0 chr1 43905697 . A . PASS END=43905720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr1 43906124 . G . PASS END=43906158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:24,0 chr1 43906159 . T . PASS END=43906159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:23,0 chr1 43906160 . C . PASS END=43906160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 43906161 . T . PASS END=43906161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 43906162 . G . PASS END=43906206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:27:0,81,988:0,81,255:36,0 chr1 43906207 . C . PASS END=43906207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr1 43906208 . C . PASS END=43906210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1127:0,82,255:31,0 chr1 43906211 . T . PASS END=43906212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:28,0 chr1 43906213 . A . PASS END=43906216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1133:0,80,255:28,0 chr1 43906217 . C . PASS END=43906218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,1124:0,63,255:27,0 chr1 43906219 . C . PASS END=43906219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 43906220 . C . PASS END=43906222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1031:0,71,255:26,0 chr1 43906223 . G . PASS END=43906225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 43906226 . A . PASS END=43906230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,1000:0,70,255:27,0 chr1 43906231 . G . PASS END=43906231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:25,0 chr1 43906232 . G . PASS END=43906233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr1 43906234 . C . PASS END=43906234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 43906235 . G . PASS END=43906235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr1 43906236 . G . PASS END=43906237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr1 43906238 . G . PASS END=43906238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:25,0 chr1 43906239 . T . PASS END=43906239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:24,0 chr1 43906240 . A . PASS END=43906240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:23,0 chr1 43906241 . G . PASS END=43906241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 43906242 . C . PASS END=43906242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:22,0 chr1 43906243 . T . PASS END=43906243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:23,0 chr1 43906244 . T . PASS END=43906250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,855:0,42,255:19,0 chr1 43906251 . T . PASS END=43906251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:19,0 chr1 43906252 . A . PASS END=43906254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:21,0 chr1 43906255 . C . PASS END=43906256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:23:0,44,806:0,44,255:20,0 chr1 43906257 . G . PASS END=43906257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43906885 . A . PASS END=43906891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 43906892 . C . PASS END=43906892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 43906893 . A . PASS END=43906925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1164:0,92,255:35,0 chr1 43906926 . T . PASS END=43906926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:33,0 chr1 43906927 . G . PASS END=43906928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 43906929 . T . PASS END=43906929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:33,0 chr1 43906930 . G . PASS END=43906964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:91:36:0,91,1264:0,91,255:40,0 chr1 43906965 . C . PASS END=43906965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:52:46:0,52,1496:0,52,255:40,0 chr1 43906966 . C . PASS END=43906968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,100,1620:0,100,255:40,0 chr1 43906969 . A . PASS END=43906969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:44:46:0,44,1496:0,44,255:40,0 chr1 43906970 . G . PASS END=43906975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:46:0,83,1582:0,83,255:40,0 chr1 43906976 . A . PASS END=43906976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1558:0,69,255:40,0 chr1 43906977 . C . PASS END=43907051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:38:0,86,1415:0,86,255:40,0 chr1 43907175 . G . PASS END=43907272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,149,255:40,0 chr1 43907357 . G . PASS END=43907489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:31:0,83,1051:0,83,255:40,0 chr1 43907667 . A . PASS END=43907667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:25,0 chr1 43907671 . G . PASS END=43907673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr1 43907674 . T . PASS END=43907674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:22,0 chr1 43907675 . T . PASS END=43907681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:24,0 chr1 43907682 . C . PASS END=43907683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 43907684 . G . PASS END=43907706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,809:0,72,255:26,0 chr1 43907707 . T . PASS END=43907707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43907708 . G . PASS END=43907708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 43907709 . G . PASS END=43907711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43907712 . A . PASS END=43907712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 43907713 . A . PASS END=43907713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 43907714 . C . PASS END=43907719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43907720 . C . PASS END=43907720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:25,0 chr1 43907721 . C . PASS END=43907721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43907722 . C . PASS END=43907722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 43907723 . T . PASS END=43907723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43907724 . C . PASS END=43907724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 43907725 . T . PASS END=43907727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 43907728 . C . PASS END=43907728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 43907729 . C . PASS END=43907729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 43907730 . G . PASS END=43907730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 43907731 . C . PASS END=43907732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 43907733 . C . PASS END=43907733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 43907734 . T . PASS END=43907734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 43907735 . G . PASS END=43907735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 43907736 . C . PASS END=43907736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 43907737 . A . PASS END=43907737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr1 43907738 . G . PASS END=43907738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 43907739 . C . PASS END=43907739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 43907740 . T . PASS END=43907744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 43907745 . G . PASS END=43907745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 43907746 . G . PASS END=43907747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 43907748 . A . PASS END=43907748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,941:0,35,255:26,0 chr1 43907749 . T . PASS END=43907750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43907751 . T . PASS END=43907752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 43907753 . C . PASS END=43907753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:25,0 chr1 43907754 . T . PASS END=43907755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 43907756 . C . PASS END=43907756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,947:0,35,255:25,0 chr1 43907757 . T . PASS END=43907767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 43907768 . A . PASS END=43907768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:23,0 chr1 43907769 . A . PASS END=43907779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,781:0,61,255:23,0 chr1 43907780 . T . PASS END=43907781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:21,0 chr1 43907782 . G . PASS END=43907783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 43907784 . G . PASS END=43907785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:20,1 chr1 43907786 . A . PASS END=43907789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:34:23:0,34,766:0,34,255:18,1 chr1 43907790 . C . PASS END=43907792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,760:0,53,255:20,0 chr1 43907793 . C . PASS END=43907793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 43907794 . A . PASS END=43907794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,680:0,52,255:20,0 chr1 43907795 . C . PASS END=43907797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 43907798 . C . PASS END=43907801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,53,255:18,0 chr1 43907803 . T . PASS END=43907803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:16,0 chr1 43907806 . G . PASS END=43907806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 43907929 . C . PASS END=43907929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 43907939 . C . PASS END=43907945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:24,0 chr1 43907946 . A . PASS END=43907946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 43907947 . G . PASS END=43907948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 43907949 . C . PASS END=43907949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 43907950 . A . PASS END=43907951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 43907952 . G . PASS END=43907952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 43907953 . C . PASS END=43907953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:25,0 chr1 43907954 . A . PASS END=43907954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43907955 . G . PASS END=43907955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr1 43907956 . C . PASS END=43907964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43907965 . C . PASS END=43907965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 43907966 . C . PASS END=43907966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 43907967 . A . PASS END=43907967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 43907968 . G . PASS END=43907969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43907970 . A . PASS END=43907970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,931:0,32,255:25,0 chr1 43907971 . G . PASS END=43907974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 43907975 . A . PASS END=43907976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 43907977 . G . PASS END=43907980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 43907981 . G . PASS END=43907981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 43907982 . C . PASS END=43907982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 43907983 . T . PASS END=43907983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:29,0 chr1 43907984 . C . PASS END=43907984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 43907985 . A . PASS END=43907986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 43907987 . G . PASS END=43907987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 43907988 . G . PASS END=43907989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr1 43907990 . G . PASS END=43907991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 43907992 . A . PASS END=43907993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1026:0,93,255:31,0 chr1 43907994 . T . PASS END=43907994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:30,0 chr1 43907995 . G . PASS END=43908036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1151:0,85,255:35,0 chr1 43908037 . A . PASS END=43908039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,79,255:26,0 chr1 43908113 . C . PASS END=43908127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,64,255:23,0 chr1 43908128 . T . PASS END=43908128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 43908129 . A . PASS END=43908172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,847:0,65,255:26,0 chr1 43908173 . G . PASS END=43908177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43908178 . C . PASS END=43908181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 43908182 . G . PASS END=43908198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 43908199 . A . PASS END=43908204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 43908205 . C . PASS END=43908205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 43908206 . C . PASS END=43908210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,976:0,68,255:26,0 chr1 43908211 . C . PASS END=43908214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 43908215 . T . PASS END=43908240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 43908241 . C . PASS END=43908241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:22,0 chr1 43908242 . C . PASS END=43908245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 43908246 . T . PASS END=43908246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 43908247 . C . PASS END=43908247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 43908248 . C . PASS END=43908248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:17,0 chr1 43908249 . A . PASS END=43908272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,50,255:18,0 chr1 43908273 . C . PASS END=43908273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 43908274 . C . PASS END=43908276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 43908277 . G . PASS END=43908277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 43908278 . C . PASS END=43908278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:11,0 chr1 43908279 . G . PASS END=43908283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,540:0,32,255:13,0 chr1 43908284 . G . PASS END=43908284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,1 chr1 43908285 . A . PASS END=43908285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:13:16:0,13,494:0,13,255:13,1 chr1 43908286 . A . LowGQ END=43908286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,435:29,0,255:12,0 chr1 43908287 . A . PASS END=43908289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:14,0 chr1 43908294 . C . PASS END=43908294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 43908490 . G . PASS END=43908523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,856:0,65,255:26,0 chr1 43908524 . T . PASS END=43908524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 43908525 . G . PASS END=43908526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43908527 . A . PASS END=43908531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 43908532 . C . PASS END=43908535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 43908536 . T . PASS END=43908539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43908540 . G . PASS END=43908543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 43908544 . G . PASS END=43908544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43908545 . C . PASS END=43908547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43908548 . G . PASS END=43908548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43908549 . T . PASS END=43908552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1039:0,74,255:26,0 chr1 43908553 . C . PASS END=43908553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43908554 . C . PASS END=43908554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 43908555 . G . PASS END=43908555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43908556 . C . PASS END=43908579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,954:0,67,255:26,0 chr1 43908580 . A . PASS END=43908757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1081:0,87,255:40,0 chr1 43908859 . A . PASS END=43908938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,111,1665:0,131,255:40,0 chr1 43909023 . G . PASS END=43909032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 43909033 . T . PASS END=43909033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 43909034 . G . PASS END=43909038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 43909039 . C . PASS END=43909039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43909040 . C . PASS END=43909042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 43909043 . G . PASS END=43909045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43909046 . G . PASS END=43909046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 43909047 . C . PASS END=43909048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 43909049 . G . PASS END=43909052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr1 43909053 . T . PASS END=43909053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:16,0 chr1 43909054 . C . PASS END=43909061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,759:0,47,255:18,0 chr1 43909062 . G . PASS END=43909066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 43909067 . T . PASS END=43909067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 43909068 . T . PASS END=43909068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43909069 . A . PASS END=43909069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 43909070 . C . PASS END=43909081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 43909082 . C . PASS END=43909082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 43909083 . A . PASS END=43909096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr1 43909097 . A . PASS END=43909097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr1 43909098 . G . PASS END=43909110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 43909111 . A . PASS END=43909112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 43909113 . G . PASS END=43909113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 43909114 . G . PASS END=43909122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 43909123 . A . PASS END=43909128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:22:0,41,810:0,41,255:20,0 chr1 43909129 . C . PASS END=43909129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 43909130 . T . PASS END=43909130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 43909131 . G . PASS END=43909132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 43909133 . A . PASS END=43909138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,56,255:20,0 chr1 43909139 . T . PASS END=43909139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,685:0,27,255:19,0 chr1 43909140 . G . PASS END=43909140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr1 43909141 . A . PASS END=43909148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,698:0,57,255:19,0 chr1 43909268 . C . PASS END=43909275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:18,0 chr1 43909276 . T . PASS END=43909276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 43909277 . C . PASS END=43909317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,605:0,54,255:19,0 chr1 43909318 . C . PASS END=43909323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 43909324 . A . PASS END=43909324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 43909325 . T . PASS END=43909344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:24,0 chr1 43909345 . G . PASS END=43909345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 43909346 . G . PASS END=43909371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 43909372 . G . PASS END=43909372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 43909373 . G . PASS END=43909373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 43909374 . A . PASS END=43909380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 43909381 . C . PASS END=43909381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 43909382 . T . PASS END=43909387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 43909388 . T . PASS END=43909388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 43909389 . T . PASS END=43909393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43909394 . C . PASS END=43909394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 43909395 . A . PASS END=43909398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43909399 . A . PASS END=43909446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:23:0,61,900:0,61,255:26,0 chr1 43909447 . G . PASS END=43909467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,53,255:18,0 chr1 43911563 . A . PASS END=43911563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 43911565 . C . PASS END=43911571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 43911572 . C . PASS END=43911578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr1 43911579 . G . PASS END=43911579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 43911580 . G . PASS END=43911583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 43911584 . A . PASS END=43911589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43911590 . A . PASS END=43911600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:32,0 chr1 43911601 . A . PASS END=43911601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:31,0 chr1 43911602 . G . PASS END=43911655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1211:0,88,255:36,0 chr1 43911663 . G . PASS END=43911663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 43911850 . A . PASS END=43911853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 43911854 . C . PASS END=43911854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 43911855 . T . PASS END=43911884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:31,0 chr1 43911885 . G . PASS END=43911886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 43911887 . G . PASS END=43911887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:24,0 chr1 43911888 . G . PASS END=43911895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,76,255:26,0 chr1 43911896 . C . PASS END=43911897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:24,0 chr1 43911898 . G . PASS END=43911919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 43911920 . T . PASS END=43911920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 43911921 . G . PASS END=43911930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:22,0 chr1 43912013 . G . PASS END=43912013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43912014 . G . PASS END=43912016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 43912017 . G . PASS END=43912018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 43912019 . T . PASS END=43912019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 43912020 . A . PASS END=43912020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 43912021 . C . PASS END=43912022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 43912023 . T . PASS END=43912026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,1002:0,70,255:26,0 chr1 43912027 . T . PASS END=43912027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:25,0 chr1 43912028 . G . PASS END=43912036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1049:0,87,255:29,0 chr1 43912037 . T . PASS END=43912037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,814:0,70,255:28,0 chr1 43912038 . T . PASS END=43912040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr1 43912041 . C . PASS END=43912041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 43912042 . C . PASS END=43912053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:30,0 chr1 43912054 . C . PASS END=43912054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 43912055 . C . PASS END=43912056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 43912057 . A . PASS END=43912057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 43912058 . A . PASS END=43912059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1070:0,90,255:30,0 chr1 43912060 . C . PASS END=43912060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 43912061 . C . PASS END=43912062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43912063 . A . PASS END=43912063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 43912064 . A . PASS END=43912076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:30,0 chr1 43912077 . T . PASS END=43912077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 43912078 . C . PASS END=43912079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr1 43912080 . A . PASS END=43912080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 43912081 . C . PASS END=43912084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:30,0 chr1 43912085 . C . PASS END=43912087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 43912091 . T . PASS END=43912091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1092:0,41,255:24,0 chr1 43912623 . C . PASS END=43912623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 43912626 . C . PASS END=43912657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,418:0,33,255:13,0 chr1 43912658 . G . PASS END=43912658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 43912659 . G . PASS END=43912668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:23,0 chr1 43912669 . T . PASS END=43912669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 43912670 . G . PASS END=43912695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:26,0 chr1 43912696 . A . PASS END=43912697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 43912698 . T . PASS END=43912698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 43912699 . T . PASS END=43912719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 43912720 . A . PASS END=43912720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:27,0 chr1 43912721 . G . PASS END=43912743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1194:0,83,255:31,0 chr1 43912744 . T . PASS END=43912744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:28,0 chr1 43912745 . G . PASS END=43912761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1172:0,93,255:31,0 chr1 43912762 . A . PASS END=43912762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 43912763 . C . PASS END=43912769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1196:0,96,255:33,0 chr1 43912770 . A . PASS END=43912770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:30,0 chr1 43912771 . C . PASS END=43912795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1209:0,86,255:33,0 chr1 43912796 . C . PASS END=43912809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,992:0,68,255:26,0 chr1 43912810 . C . PASS END=43912812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43912813 . A . PASS END=43912813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 43912814 . C . PASS END=43912814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 43912815 . T . PASS END=43912816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr1 43912817 . T . PASS END=43912820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr1 43912821 . C . PASS END=43912839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 43912844 . G . PASS END=43912844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 43913216 . G . PASS END=43913338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1072:0,81,255:40,0 chr1 43913339 . A . PASS END=43913347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr1 43913348 . C . PASS END=43913350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 43913351 . T . PASS END=43913358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 43913359 . G . PASS END=43913359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:25,0 chr1 43913360 . C . PASS END=43913363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 43913364 . G . PASS END=43913365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43913366 . A . PASS END=43913369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43913520 . T . PASS END=43913642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,138,255:40,0 chr1 43913750 . G . PASS END=43913760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1333:0,84,255:35,0 chr1 43913761 . T . PASS END=43913761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:33,0 chr1 43913762 . C . PASS END=43913785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1350:0,84,255:36,0 chr1 43913786 . G . PASS END=43913786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:31,0 chr1 43913787 . C . PASS END=43913787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 43913788 . T . PASS END=43913788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1175:0,77,255:31,0 chr1 43913789 . C . PASS END=43913795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1249:0,89,255:31,0 chr1 43913796 . A . PASS END=43913796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:30,0 chr1 43913797 . G . PASS END=43913816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1156:0,83,255:33,0 chr1 43913817 . C . PASS END=43913817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 43913818 . G . PASS END=43913838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 43913839 . T . PASS END=43913856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,986:0,78,255:26,0 chr1 43913857 . C . PASS END=43913874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 43913875 . G . PASS END=43913935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,992:0,74,255:27,0 chr1 43913936 . A . PASS END=43913943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 43913944 . C . PASS END=43913944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 43913945 . A . PASS END=43913959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1157:0,87,255:31,0 chr1 43913960 . A . PASS END=43914013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,864:0,61,255:26,0 chr1 43914014 . C . PASS END=43914015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:17,0 chr1 43914016 . C . PASS END=43914026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr1 43914027 . C . PASS END=43914032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 43914033 . T . PASS END=43914036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 43914037 . T . PASS END=43914038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43914039 . C . PASS END=43914053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:22,0 chr1 43914054 . C . PASS END=43914054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 43914055 . C . PASS END=43914059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:23,0 chr1 43914060 . C . PASS END=43914060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 43914061 . G . PASS END=43914070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:23,0 chr1 43914071 . A . PASS END=43914071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 43914072 . G . PASS END=43914120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,756:0,63,255:22,0 chr1 43914121 . A . PASS END=43914155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 43914159 . A . PASS END=43914159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 43914283 . G . PASS END=43914389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:38:0,96,1440:0,107,255:40,0 chr1 43914390 . T . PASS END=43914390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr1 43914391 . C . PASS END=43914399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,95,255:31,0 chr1 43915774 . G . PASS END=43915842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:69:0,120,1800:0,194,255:40,0 chr1 43916008 . T . PASS END=43916008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:20,0 chr1 43916009 . C . PASS END=43916016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 43916017 . G . PASS END=43916017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 43916018 . T . PASS END=43916020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 43916021 . T . PASS END=43916021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 43916022 . T . PASS END=43916029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 43916030 . A . PASS END=43916030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 43916031 . G . PASS END=43916033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 43916034 . C . PASS END=43916034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 43916035 . T . PASS END=43916035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 43916036 . T . PASS END=43916097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1116:0,83,255:33,0 chr1 43916098 . C . PASS END=43916098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr1 43916099 . T . PASS END=43916111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 43916112 . C . PASS END=43916112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43916113 . A . PASS END=43916113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 43916114 . A . PASS END=43916114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 43916115 . C . PASS END=43916117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43916118 . A . PASS END=43916120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 43916121 . C . PASS END=43916126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43916127 . C . PASS END=43916142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,65,255:23,0 chr1 43916143 . C . PASS END=43916151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 43916690 . T . PASS END=43916742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,108,1505:0,110,255:40,0 chr1 43916909 . T . PASS END=43916930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,840:0,72,255:25,0 chr1 43916931 . C . PASS END=43916931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 43916932 . C . PASS END=43916942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 43916943 . C . PASS END=43916943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 43916944 . A . PASS END=43916944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 43916945 . G . PASS END=43916982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1091:0,80,255:34,0 chr1 43917010 . T . PASS END=43917059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,92,255:35,0 chr1 43917060 . T . PASS END=43917060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 43917061 . T . PASS END=43917065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 43917066 . A . PASS END=43917066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:25,0 chr1 43917067 . G . PASS END=43917078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 43917079 . A . PASS END=43917079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 43917080 . C . PASS END=43917082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43917083 . C . PASS END=43917083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 43917084 . G . PASS END=43917084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:24,0 chr1 43917085 . A . PASS END=43917085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 43917086 . G . PASS END=43917088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 43917089 . T . PASS END=43917089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 43917090 . G . PASS END=43917092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 43917093 . A . PASS END=43917093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 43917094 . C . PASS END=43917094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 43917095 . T . PASS END=43917095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 43917096 . C . PASS END=43917106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 43917107 . A . PASS END=43917119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1047:0,74,255:27,0 chr1 43917120 . C . PASS END=43917131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 43917132 . G . PASS END=43917146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,845:0,64,255:26,0 chr1 43917147 . A . PASS END=43917147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 43917148 . G . PASS END=43917148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 43917149 . G . PASS END=43917157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 43917158 . A . PASS END=43917172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 43917173 . C . PASS END=43917174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 43917175 . G . PASS END=43917192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,64,255:25,0 chr1 43917193 . G . PASS END=43917195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 43917196 . C . PASS END=43917199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 43917200 . G . PASS END=43917207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 43917208 . C . PASS END=43917208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 43917209 . A . PASS END=43917209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 43917210 . C . PASS END=43917210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 43917211 . A . PASS END=43917215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 43917319 . C . PASS END=43917388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1234:0,84,255:38,0 chr1 43917469 . C . PASS END=43917515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,964:0,84,255:31,0 chr1 43917516 . C . PASS END=43917516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 43917517 . C . PASS END=43917518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 43917606 . C . PASS END=43917615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 43917616 . C . PASS END=43917616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 43917617 . G . PASS END=43917625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr1 43917626 . A . PASS END=43917626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 43917627 . A . PASS END=43917627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 43917628 . G . PASS END=43917630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 43917631 . C . PASS END=43917631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:26,0 chr1 43917632 . T . PASS END=43917653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 43917654 . T . PASS END=43917654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 43917655 . G . PASS END=43917684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,86,255:31,0 chr1 43917876 . C . PASS END=43917935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:33:0,96,1195:0,98,255:39,0 chr1 43917936 . C . PASS END=43917936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:34,0 chr1 43917937 . T . PASS END=43917960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,91,255:35,0 chr1 43917961 . T . PASS END=43917972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:28:0,75,1125:0,84,255:26,0 chr1 43917973 . C . PASS END=43917973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 43917974 . C . PASS END=43917988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:25,0 chr1 43917989 . T . PASS END=43917990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:18,0 chr1 43918574 . A . PASS END=43918675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,119,1800:0,119,255:40,0 chr1 43919057 . C . PASS END=43919059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 43919060 . G . PASS END=43919060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 43919061 . G . PASS END=43919065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,627:0,51,255:19,0 chr1 43919066 . C . PASS END=43919068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 43919069 . A . PASS END=43919069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 43919070 . G . PASS END=43919070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 43919071 . G . PASS END=43919073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,712:0,44,255:20,0 chr1 43919074 . T . PASS END=43919076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 43919077 . G . PASS END=43919077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 43919078 . G . PASS END=43919080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 43919081 . T . PASS END=43919082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 43919083 . C . PASS END=43919084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43919085 . G . PASS END=43919092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 43919093 . T . PASS END=43919093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 43919094 . G . PASS END=43919111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:23,0 chr1 43919112 . A . PASS END=43919112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 43919113 . G . PASS END=43919121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 43919122 . T . PASS END=43919122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 43919123 . C . PASS END=43919129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:23,0 chr1 43919130 . G . PASS END=43919130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 43919131 . G . PASS END=43919133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 43919134 . G . PASS END=43919134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 43919135 . G . PASS END=43919137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 43919138 . C . PASS END=43919138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:19,0 chr1 43919139 . C . PASS END=43919141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 43919142 . G . PASS END=43919155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,670:0,44,255:18,0 chr1 43919156 . T . PASS END=43919156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 43919157 . T . PASS END=43919164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:17,0 chr1 43919165 . T . PASS END=43919166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 43919167 . T . PASS END=43919168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 43919266 . C . PASS END=43919322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,260:0,24,255:9,0 chr1 43919323 . G . PASS END=43919323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 43919324 . C . PASS END=43919324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 43919325 . G . PASS END=43919325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 43919326 . C . PASS END=43919357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,272:0,27,255:9,0 chr1 43919358 . T . PASS END=43919358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 43919359 . C . PASS END=43919368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 43919369 . G . PASS END=43919375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,233:6,0 chr1 43919376 . G . PASS END=43919383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 43919384 . C . PASS END=43919384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 43919385 . G . PASS END=43919386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 43919387 . G . PASS END=43919387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:3,0 chr1 43919388 . G . PASS END=43919392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 43919393 . C . PASS END=43919393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 43919394 . A . PASS END=43919412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:6,0 chr1 43919413 . A G, 0.17 DRAGENSnpHardQUAL DP=6;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:5,1,0:0.167,0.000:6:4,0,0:1,1,0:14:21,0,50,36,179,215:21,0,176:4,0:1.6776e-01,1.4216e+01,6.7216e+01,4.9986e+01,2.2772e+02,2.3172e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,0,1:3,2,1,0 chr1 43919414 . G . PASS END=43919461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 43919462 . C . PASS END=43919464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,111:3,0 chr1 44010747 . A . PASS END=44010776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,62,255:26,0 chr1 44010777 . A . PASS END=44010778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44010779 . G . PASS END=44010784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 44010785 . C . PASS END=44010787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:27,0 chr1 44010788 . T . PASS END=44010788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 44010789 . G . PASS END=44010789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 44010790 . T . PASS END=44010792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 44010793 . C . PASS END=44010795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 44010796 . C . PASS END=44010804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr1 44010805 . T . PASS END=44010805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,906:0,29,255:24,0 chr1 44010806 . G . PASS END=44010833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:26,0 chr1 44010834 . G . PASS END=44010837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 44013710 . A . PASS END=44013717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,117,1767:0,117,255:40,0 chr1 44013718 . A . PASS END=44013718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:56:50:0,56,1607:0,56,255:40,0 chr1 44013719 . G . PASS END=44013770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:47:0,83,1396:0,83,255:40,0 chr1 44019163 . G . PASS END=44019171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:26:0,71,941:0,71,255:27,0 chr1 44019172 . T . PASS END=44019308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1255:0,87,255:40,0 chr1 44019471 . G . PASS END=44019607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:31:0,84,1206:0,93,255:40,0 chr1 44019608 . C . PASS END=44019612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:29:0,72,1080:0,77,255:26,0 chr1 44035261 . A . PASS END=44035277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 44035278 . G . PASS END=44035306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:26,0 chr1 44035307 . G . PASS END=44035317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr1 44035318 . T . PASS END=44035318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 44035319 . G . PASS END=44035322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44035323 . A . PASS END=44035323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,907:0,54,255:27,0 chr1 44035324 . A . PASS END=44035367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1108:0,80,255:31,0 chr1 44035368 . G . PASS END=44035376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,994:0,70,255:26,0 chr1 44035377 . A . PASS END=44035377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 44035378 . T . PASS END=44035378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 44035379 . T . PASS END=44035381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 44035382 . T . PASS END=44035392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 44035393 . A . PASS END=44035393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:24,0 chr1 44035394 . C . PASS END=44035395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44035396 . T . PASS END=44035402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,994:0,68,255:26,0 chr1 44035403 . T . PASS END=44035403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:21,0 chr1 44035404 . G . PASS END=44035420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,864:0,72,255:24,0 chr1 44035421 . C . PASS END=44035421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,784:0,41,255:20,0 chr1 44035422 . A . PASS END=44035422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 44035423 . A . PASS END=44035423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 44035424 . C . PASS END=44035424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44035425 . G . PASS END=44035449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:19,0 chr1 44041581 . G . PASS END=44041583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 44041584 . G . PASS END=44041584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44041585 . T . PASS END=44041585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 44041586 . T . PASS END=44041595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 44041596 . G . PASS END=44041597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44041598 . G . PASS END=44041598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44044481 . G . PASS END=44044482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 44044483 . G . PASS END=44044483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 44044484 . C . PASS END=44044487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr1 44044488 . G . PASS END=44044488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 44044489 . C . PASS END=44044490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44044491 . G . PASS END=44044491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 44044492 . A . PASS END=44044585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1177:0,80,255:37,0 chr1 44044586 . T . PASS END=44044591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:26,0 chr1 44044847 . G . PASS END=44044849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,817:0,61,255:26,0 chr1 44044850 . T . PASS END=44044864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,950:0,81,255:32,0 chr1 44044865 . G . PASS END=44044865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:31,0 chr1 44044866 . G . PASS END=44044867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 44044868 . G . PASS END=44044868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr1 44044869 . C . PASS END=44044881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1103:0,96,255:32,0 chr1 44044882 . T . PASS END=44044882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 44044883 . G . PASS END=44044906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:32,0 chr1 44044907 . G . PASS END=44044945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:26,0 chr1 44044946 . T . PASS END=44044955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:21:0,48,720:0,50,255:19,0 chr1 44044956 . A . PASS END=44044956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,649:0,30,255:13,0 chr1 44048753 . A . PASS END=44048764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,114,1569:0,114,255:40,0 chr1 44054402 . T . PASS END=44054440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 44054441 . G . PASS END=44054451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr1 44054452 . A . PASS END=44054470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 44054471 . A . PASS END=44054471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,280:0,3,255:10,0 chr1 44054472 . C . PASS END=44054484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 44054485 . G . PASS END=44054485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 44054486 . C . PASS END=44054490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr1 44054491 . G . PASS END=44054491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr1 44054492 . G . PASS END=44054499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 44054500 . A . PASS END=44054500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 44054501 . T . PASS END=44054524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,576:0,40,255:18,0 chr1 44054525 . G . PASS END=44054535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 44054536 . C . PASS END=44054566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,623:0,51,255:19,0 chr1 44054567 . G . PASS END=44054567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 44054568 . C . PASS END=44054579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 44054580 . G . PASS END=44054580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 44054581 . C . PASS END=44054583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 44054584 . A . PASS END=44054584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 44054585 . G . PASS END=44054601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 44054602 . G . PASS END=44054605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 44054606 . A . PASS END=44054606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 44054607 . C . PASS END=44054632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,368:0,36,255:12,0 chr1 44054633 . T . PASS END=44054633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 44054634 . G . PASS END=44054638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 44054639 . T . PASS END=44054647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 44054648 . C . PASS END=44054649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 44054650 . A . PASS END=44054661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 44054662 . A . PASS END=44054662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 44054663 . C . PASS END=44054669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 44054670 . A . PASS END=44054670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 44054671 . G . PASS END=44054671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 44056643 . C . PASS END=44056806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,1002:0,80,255:40,0 chr1 44056807 . A . PASS END=44056808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44056809 . C . PASS END=44056809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44056810 . C . PASS END=44056822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:23,0 chr1 44056823 . G . PASS END=44056823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 44056824 . C . PASS END=44056824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 44056825 . G . PASS END=44056825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 44056826 . G . PASS END=44056847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,900:0,69,255:24,0 chr1 44056848 . T . PASS END=44056848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 44056849 . G . PASS END=44056866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 44056867 . G . PASS END=44056897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 44056898 . A . PASS END=44056902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:13,0 chr1 44056903 . G . PASS END=44056930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 44056931 . C . PASS END=44056931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 44056932 . C . PASS END=44056932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 44056933 . T . PASS END=44056933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 44056934 . C . PASS END=44056935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 44056936 . A . PASS END=44056937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 44056938 . C . PASS END=44056948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 44056949 . G . PASS END=44056962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 44056963 . A . PASS END=44056963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr1 44056964 . T . PASS END=44056999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:12,0 chr1 44057000 . C . PASS END=44057000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 44057001 . T . PASS END=44057009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 44057010 . G . PASS END=44057014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 44057015 . A . PASS END=44057022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 44057023 . G . PASS END=44057025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 44057026 . C . PASS END=44057026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 44057027 . G . PASS END=44057035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 44057036 . G . PASS END=44057066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 44057067 . C . PASS END=44057080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 44057081 . A . PASS END=44057081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 44057082 . C . PASS END=44057112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,44,255:18,0 chr1 44057113 . A . PASS END=44057114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44057115 . C . PASS END=44057146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr1 44057147 . G . PASS END=44057165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 44057166 . C . PASS END=44057173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 44057174 . T . PASS END=44057177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 44057178 . C . PASS END=44057178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 44057179 . G . PASS END=44057193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 44057194 . C . PASS END=44057195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 44057196 . C . PASS END=44057196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 44057197 . A . PASS END=44057224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,637:0,40,255:19,0 chr1 44057483 . T . PASS END=44057571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:36:0,82,1310:0,82,255:40,0 chr1 44057572 . A . PASS END=44057572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:33,0 chr1 44057573 . T . PASS END=44057581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:34,0 chr1 44057582 . A . PASS END=44057609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 44057610 . A . PASS END=44057612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 44057613 . C . PASS END=44057613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44057614 . C . PASS END=44057619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr1 44058128 . C . PASS END=44058227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:34:0,99,1218:0,101,255:40,0 chr1 44058228 . T . PASS END=44058250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:33,0 chr1 44058251 . G . PASS END=44058252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 44058253 . G . PASS END=44058264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:26:0,54,810:0,78,255:19,0 chr1 44058265 . C A, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,14,0:0,12,0:75:163,78,0,993,78,993:255,78,0:0,0:1.2525e+02,7.5250e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,18:0,0,16,10 chr1 44058266 . C . PASS END=44058272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:16,0 chr1 44063419 . C . PASS END=44063420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 44063421 . C . PASS END=44063421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:12,0 chr1 44063422 . C . PASS END=44063423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 44063424 . T . LowGQ END=44063424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,339:15,0,255:11,0 chr1 44063425 . C . PASS END=44063426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 44063427 . G . LowGQ END=44063427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,363:15,0,255:11,0 chr1 44063428 . C . PASS END=44063429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 44063430 . C . PASS END=44063430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 44063431 . C . PASS END=44063431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 44063432 . T . PASS END=44063432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:15,0 chr1 44063433 . C . PASS END=44063436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:18,0 chr1 44063437 . A . PASS END=44063437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 44063438 . G . PASS END=44063438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,510:0,4,255:15,0 chr1 44063439 . A . PASS END=44063440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,523:0,37,255:17,0 chr1 44063441 . G . PASS END=44063441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,585:0,54,255:18,0 chr1 44063442 . G . PASS END=44063442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 44063443 . T . PASS END=44063445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,578:0,54,255:18,0 chr1 44063446 . T . PASS END=44063446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,532:0,4,255:15,0 chr1 44063447 . G . PASS END=44063448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr1 44063449 . G . PASS END=44063457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 44063458 . T . PASS END=44063458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 44063459 . G . PASS END=44063470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:23,0 chr1 44063471 . G . PASS END=44063471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 44063472 . G . PASS END=44063472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44063473 . T . PASS END=44063474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 44063475 . C . PASS END=44063475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44063476 . G . PASS END=44063476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 44063477 . G . PASS END=44063483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 44063484 . T . PASS END=44063488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 44063489 . C . PASS END=44063489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 44063490 . C . PASS END=44063499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,682:0,44,255:19,0 chr1 44063500 . C . PASS END=44063501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 44063502 . G . PASS END=44063503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 44063504 . C . PASS END=44063504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44063505 . A . PASS END=44063506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 44063507 . C . PASS END=44063513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 44063514 . G . PASS END=44063514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 44063515 . G . PASS END=44063520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 44063521 . T . PASS END=44063521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 44063522 . C . PASS END=44063526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 44063527 . A . PASS END=44063527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 44063528 . G . PASS END=44063528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 44063529 . T . PASS END=44063529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:20,0 chr1 44063530 . A . PASS END=44063530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 44063531 . C . PASS END=44063531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:20,0 chr1 44063532 . T . PASS END=44063550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:23,0 chr1 44063551 . T . PASS END=44063552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:19,0 chr1 44063553 . G . PASS END=44063565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,65,255:24,0 chr1 44063566 . G . PASS END=44063566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 44063567 . C . PASS END=44063574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 44063575 . A . PASS END=44063575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 44063576 . T . PASS END=44063581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 44063582 . G . PASS END=44063582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 44063583 . G . PASS END=44063609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:24,0 chr1 44063610 . T . PASS END=44063610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr1 44063611 . G . PASS END=44063676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,931:0,62,255:25,0 chr1 44063677 . G . PASS END=44063677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 44063678 . C . PASS END=44063680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 44063681 . C . PASS END=44063696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,44,255:19,0 chr1 44063697 . C . PASS END=44063699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,585:0,37,255:13,0 chr1 44063700 . G . PASS END=44063701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 44063702 . G . PASS END=44063708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr1 44063709 . C . PASS END=44063709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 44063710 . G . PASS END=44063716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 44063717 . T . PASS END=44063723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 44063724 . G . LowGQ END=44063724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:6,0 chr1 44064391 . T . PASS END=44064408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:18,0 chr1 44064409 . G . PASS END=44064409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 44064410 . G . PASS END=44064423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,737:0,57,255:19,0 chr1 44064424 . A . PASS END=44064447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:24,0 chr1 44064448 . A . PASS END=44064448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 44064449 . T . PASS END=44064468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:22,0 chr1 44064469 . T . PASS END=44064469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 44064470 . C . PASS END=44064478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:22,0 chr1 44064479 . G . PASS END=44064500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:19:0,54,706:0,57,255:19,0 chr1 44064501 . T . PASS END=44064507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 44064508 . T . PASS END=44064550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,629:0,44,255:18,0 chr1 44064551 . C . PASS END=44064551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 44064552 . A . PASS END=44064558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 44064559 . A . PASS END=44064570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:13:0,34,515:0,34,255:13,0 chr1 44064571 . T . PASS END=44064571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:10,0 chr1 44064572 . A . PASS END=44064581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 44064582 . C . PASS END=44064582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 44064583 . A . PASS END=44064584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 44067742 . T . PASS END=44067768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,101,1364:0,101,255:37,0 chr1 44069087 . G . PASS END=44069109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1250:0,86,255:35,0 chr1 44069110 . C . PASS END=44069110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:33,0 chr1 44069111 . C . PASS END=44069129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1341:0,95,255:39,0 chr1 44069130 . T . PASS END=44069130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:37,0 chr1 44069131 . T . PASS END=44069134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1341:0,84,255:36,0 chr1 44069135 . G . PASS END=44069135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr1 44069136 . T . PASS END=44069145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1260:0,84,255:36,0 chr1 44069146 . T . PASS END=44069146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1271:0,45,255:28,0 chr1 44069147 . A . PASS END=44069147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1333:0,62,255:29,0 chr1 44069148 . C . PASS END=44069153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:85:33:0,85,1172:0,85,255:30,0 chr1 44069154 . A . PASS END=44069154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,930:0,65,255:29,0 chr1 44069155 . G . PASS END=44069185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1088:0,80,255:30,0 chr1 44069186 . G . PASS END=44069204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,939:0,65,255:26,0 chr1 44069282 . T . PASS END=44069291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:23,0 chr1 44069292 . G . PASS END=44069292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 44069293 . C . PASS END=44069295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 44069296 . A . PASS END=44069296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 44069297 . C . PASS END=44069317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 44069318 . C . PASS END=44069318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 44069319 . C . PASS END=44069328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,923:0,64,255:26,0 chr1 44069329 . G . PASS END=44069331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 44069332 . C . PASS END=44069336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 44069337 . C . PASS END=44069337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44069338 . C . PASS END=44069338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 44069339 . A . PASS END=44069343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:27,0 chr1 44069344 . C . PASS END=44069344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 44069345 . A . PASS END=44069346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 44069347 . C . PASS END=44069351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 44069352 . C . PASS END=44069352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:22,0 chr1 44069353 . A . PASS END=44069364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:25:0,67,962:0,67,255:24,0 chr1 44069365 . G . PASS END=44069365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 44069366 . G . PASS END=44069372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 44069373 . G . PASS END=44069373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 44069374 . C . PASS END=44069379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 44069380 . T . PASS END=44069380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 44069381 . A . PASS END=44069389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 44069390 . A . PASS END=44069390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 44069391 . G . PASS END=44069402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 44069403 . C . PASS END=44069403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 44069404 . G . PASS END=44069411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 44069412 . G . PASS END=44069414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 44069415 . G . PASS END=44069454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,731:0,63,255:24,0 chr1 44069455 . A . PASS END=44069467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 44069468 . T . PASS END=44069468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44069469 . G . PASS END=44069470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 44069471 . A . PASS END=44069471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:19,0 chr1 44069472 . C . PASS END=44069472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 44069473 . A . PASS END=44069477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,59,255:19,0 chr1 44069478 . G . PASS END=44069478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 44069479 . A . PASS END=44069479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 44069480 . C . PASS END=44069502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:24,0 chr1 44069503 . G . PASS END=44069503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 44069504 . C . PASS END=44069508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 44069509 . A . PASS END=44069509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 44069510 . A . PASS END=44069523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:25,0 chr1 44069524 . G . PASS END=44069527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 44069528 . A . PASS END=44069528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:27,0 chr1 44069529 . G . PASS END=44069538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,948:0,84,255:29,0 chr1 44069539 . A . PASS END=44069539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 44069540 . A . PASS END=44069544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:32,0 chr1 44069545 . A . PASS END=44069545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1127:0,72,255:31,0 chr1 44069546 . T . PASS END=44069550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:32,0 chr1 44069551 . A . PASS END=44069551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1145:0,33,255:26,0 chr1 44069552 . C . PASS END=44069593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1095:0,80,255:33,0 chr1 44069594 . T . PASS END=44069594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:33,0 chr1 44069595 . G . PASS END=44069624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1305:0,93,255:36,0 chr1 44069625 . G . PASS END=44069625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 44069626 . G . PASS END=44069630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 44069631 . G . PASS END=44069631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 44069632 . G . PASS END=44069634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 44069635 . C . PASS END=44069635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 44069636 . C . PASS END=44069688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1133:0,83,255:33,0 chr1 44069689 . C . PASS END=44069689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:28,0 chr1 44069690 . G . PASS END=44069699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:28:0,83,966:0,83,255:28,0 chr1 44069700 . C . PASS END=44069703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 44069704 . C . PASS END=44069705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 44069706 . A . PASS END=44069706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:27,0 chr1 44069707 . C . PASS END=44069710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 44069711 . A . PASS END=44069712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 44069713 . C . PASS END=44069823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:36,0 chr1 44069824 . C . PASS END=44069824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 44069825 . C . PASS END=44069831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 44069832 . C . PASS END=44069857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 44069858 . A . PASS END=44069860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr1 44070574 . T . PASS END=44070587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1320:0,110,255:37,0 chr1 44070588 . T . PASS END=44070588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:35,0 chr1 44070589 . T . PASS END=44070666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1149:0,87,255:39,0 chr1 44070667 . T . PASS END=44070671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:26,0 chr1 44070861 . A . PASS END=44070871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,886:0,66,255:24,0 chr1 44070872 . T . PASS END=44070872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 44070873 . G . PASS END=44070879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 44070880 . G . PASS END=44070883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 44070884 . G . PASS END=44070884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 44070885 . G . PASS END=44070897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1125:0,87,255:30,0 chr1 44070898 . A . PASS END=44070898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 44070899 . C . PASS END=44070902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 44070903 . A . PASS END=44070903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 44070904 . T . PASS END=44070905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44070906 . C . PASS END=44070906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:25,0 chr1 44070907 . G . PASS END=44070908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44070909 . A . PASS END=44070915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 44070916 . T . PASS END=44070920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 44070921 . G . PASS END=44070925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 44070926 . G . PASS END=44071018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,947:0,62,255:26,0 chr1 44071019 . C . PASS END=44071019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44071020 . C . PASS END=44071030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 44071031 . C . PASS END=44071036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44071037 . G . PASS END=44071037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 44071038 . C . PASS END=44071045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44071046 . C . PASS END=44071079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,74,255:26,0 chr1 44071080 . T . PASS END=44071114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,46,255:19,0 chr1 44071200 . G . PASS END=44071208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr1 44071209 . C . PASS END=44071220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,922:0,66,255:25,0 chr1 44071221 . G A, 122.24 PASS DP=26;MQ=250.00;FractionInformativeReads=0.962 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,10,0:0,15,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,12:0,0,12,13 chr1 44071222 . C . PASS END=44071223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 44071224 . C . PASS END=44071224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 44071225 . A . PASS END=44071258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,864:0,62,255:26,0 chr1 44071259 . G . PASS END=44071291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,876:0,69,255:24,0 chr1 44071292 . A . PASS END=44071293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 44071911 . C . PASS END=44071912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 44071913 . T . PASS END=44071913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 44071914 . C . PASS END=44071932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr1 44071933 . G . PASS END=44071933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 44071934 . C . PASS END=44071946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr1 44071947 . C . PASS END=44071976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr1 44071977 . A . PASS END=44072001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 44072002 . A . PASS END=44072002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr1 44072003 . T . PASS END=44072015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr1 44072016 . A . PASS END=44072016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:28,0 chr1 44072017 . C . PASS END=44072032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1218:0,86,255:32,0 chr1 44072033 . C . PASS END=44072033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:30,0 chr1 44072034 . A . PASS END=44072074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1170:0,83,255:33,0 chr1 44072075 . G . PASS END=44072075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 44072076 . G . PASS END=44072079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 44072080 . T . PASS END=44072080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:30,0 chr1 44072081 . G . PASS END=44072093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:30,0 chr1 44072094 . T . PASS END=44072115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr1 44072116 . A . PASS END=44072129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:19,0 chr1 44072485 . A . PASS END=44072506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,963:0,68,255:26,0 chr1 44072507 . A . PASS END=44072592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1050:0,82,255:35,0 chr1 44072593 . G . PASS END=44072596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:24,0 chr1 44072597 . T . PASS END=44072597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:23,0 chr1 44072598 . C . PASS END=44072602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:32:0,72,1080:0,79,255:25,0 chr1 44072603 . T . PASS END=44072604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 44072605 . A . PASS END=44072608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 44072609 . T . PASS END=44072609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,984:0,48,255:25,0 chr1 44072610 . C . PASS END=44072639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,876:0,61,255:26,0 chr1 44073995 . T . PASS END=44074006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,132,255:40,0 chr1 44075054 . G . PASS END=44075055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 44075056 . A . PASS END=44075056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 44075057 . A . PASS END=44075066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,713:0,60,255:25,0 chr1 44075067 . T . PASS END=44075067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 44075068 . C . PASS END=44075092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,933:0,65,255:26,0 chr1 44075093 . G . PASS END=44075111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:29,0 chr1 44075112 . T . PASS END=44075112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 44075113 . T . PASS END=44075131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 44075132 . C . PASS END=44075145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,925:0,78,255:26,0 chr1 44075146 . G . PASS END=44075146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:25,0 chr1 44075147 . G . PASS END=44075169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,856:0,61,255:26,0 chr1 44078439 . G . PASS END=44078471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,186,255:40,0 chr1 44079289 . G . PASS END=44079342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,760:0,63,255:25,0 chr1 44079343 . G . PASS END=44079343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:24,0 chr1 44079344 . C . PASS END=44079347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 44079348 . A . PASS END=44079348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 44079349 . A . PASS END=44079353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 44079354 . A . PASS END=44079354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 44079355 . A . PASS END=44079369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 44079370 . T . PASS END=44079370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,617:0,35,255:17,0 chr1 44079371 . C . PASS END=44079377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 44079378 . G . PASS END=44079378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:18,0 chr1 44079379 . A . PASS END=44079386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 44083116 . T . PASS END=44083147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,105,1388:0,108,255:40,0 chr1 44083148 . G . PASS END=44083229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,99,255:40,0 chr1 44083230 . T . PASS END=44083239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,923:0,64,255:26,0 chr1 44083407 . G . PASS END=44083434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,786:0,66,255:25,0 chr1 44083435 . C . PASS END=44083435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 44083436 . A . PASS END=44083468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,781:0,75,255:26,0 chr1 44083469 . T . PASS END=44083472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 44083473 . T . PASS END=44083506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,980:0,81,255:33,0 chr1 44083507 . T C, 145.86 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,17,0:0,16,0:96:184,99,0,1243,99,1243:255,99,0:0,0:1.4586e+02,9.5856e+01,0.0000e+00,4.5000e+02,1.3063e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,18:0,0,17,16 chr1 44083508 . G . PASS END=44083518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:31,0 chr1 44083519 . G A, 148.40 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,17,0:0,17,0:98:186,101,0,1237,101,1237:255,102,0:0,0:1.4840e+02,9.8399e+01,0.0000e+00,4.5000e+02,1.3317e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,21:0,0,16,18 chr1 44083520 . A . PASS END=44083545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:32,0 chr1 44083546 . T . PASS END=44083557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 44083558 . G . PASS END=44083571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,65,255:26,0 chr1 44083572 . A . PASS END=44083576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 44083577 . T . PASS END=44083582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 44084301 . G . PASS END=44084305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 44084306 . A . PASS END=44084307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 44084308 . G . PASS END=44084314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 44084315 . G . PASS END=44084315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 44084316 . T . PASS END=44084324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 44084325 . G . PASS END=44084326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44084327 . C . PASS END=44084327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 44084328 . C . PASS END=44084328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 44084329 . G . PASS END=44084329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 44084330 . T . PASS END=44084331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 44084332 . G . PASS END=44084332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 44084333 . C . PASS END=44084352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 44084353 . T . PASS END=44084357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr1 44084358 . G . PASS END=44084359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44084360 . G . PASS END=44084361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 44084362 . C . PASS END=44084366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 44084367 . T . PASS END=44084370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 44084371 . A . PASS END=44084375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44084376 . G . PASS END=44084386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 44084387 . C . PASS END=44084387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 44084388 . A . PASS END=44084388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 44084389 . C . PASS END=44084391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 44084392 . A . PASS END=44084392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 44084393 . C . PASS END=44084393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 44084394 . A . PASS END=44084418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 44084419 . A . PASS END=44084420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 44084719 . A . PASS END=44084734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 44084735 . A . PASS END=44084736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44084737 . C . PASS END=44084737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 44084738 . G . PASS END=44084738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44084739 . C T, 131.27 PASS DP=30;MQ=250.00;FractionInformativeReads=0.933 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,17,0:0,11,0:81:169,84,0,1085,84,1085:255,87,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,9:0,0,16,12 chr1 44084740 . G . PASS END=44084776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1124:0,87,255:39,0 chr1 44084777 . A . PASS END=44084789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:37,0 chr1 44084790 . G . PASS END=44084790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr1 44084791 . T . PASS END=44084820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1266:0,81,255:37,0 chr1 44084821 . C . PASS END=44084821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1210:0,61,255:29,1 chr1 44084822 . G . PASS END=44084822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:54:35:0,54,1160:0,54,255:30,1 chr1 44084823 . G . PASS END=44084824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:34:0,69,1155:0,69,255:31,1 chr1 44084825 . T . PASS END=44084831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,1 chr1 44084832 . C . PASS END=44084832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1024:0,38,255:27,0 chr1 44084833 . T . PASS END=44084835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 44084836 . A . PASS END=44084841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:29,0 chr1 44084842 . C . PASS END=44084845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:28,0 chr1 44084846 . A . PASS END=44084847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 44084848 . G . PASS END=44084848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,881:0,56,255:27,0 chr1 44084849 . C . PASS END=44084849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:28,0 chr1 44084850 . A . PASS END=44084850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:26,0 chr1 44084851 . G . PASS END=44084853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44084854 . C . PASS END=44084862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,970:0,60,255:27,0 chr1 44084863 . G . PASS END=44084863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,963:0,35,255:24,0 chr1 44084864 . T . PASS END=44084867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,73,255:25,0 chr1 44084868 . C . PASS END=44084868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,920:0,37,255:20,0 chr1 44084869 . T . PASS END=44084869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:21,0 chr1 44084870 . G . PASS END=44084870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:21,0 chr1 44084871 . C . PASS END=44084871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:20,0 chr1 44084872 . A . PASS END=44084873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 44084959 . C . PASS END=44084960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44084961 . C . PASS END=44084961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 44084962 . G . PASS END=44084975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,872:0,66,255:25,0 chr1 44084976 . C . PASS END=44084976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 44084977 . C . PASS END=44084986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr1 44084987 . A . PASS END=44085001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1049:0,84,255:29,0 chr1 44085002 . A . PASS END=44085002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 44085003 . T . PASS END=44085038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1127:0,83,255:34,0 chr1 44085039 . T . PASS END=44085039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1219:0,77,255:35,0 chr1 44085040 . C . PASS END=44085091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1243:0,91,255:35,0 chr1 44085092 . G . PASS END=44085092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 44085093 . A . PASS END=44085118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1172:0,92,255:34,0 chr1 44085119 . G . PASS END=44085151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,990:0,65,255:29,0 chr1 44085152 . G . PASS END=44085156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44085157 . G . PASS END=44085196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,861:0,64,255:26,0 chr1 44085197 . C . PASS END=44085197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 44085198 . A . PASS END=44085198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 44085199 . A . PASS END=44085199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 44085200 . G . PASS END=44085218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 44085219 . T . PASS END=44085240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,637:0,43,255:19,0 chr1 44085241 . C . PASS END=44085242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:14,0 chr1 44085243 . A . PASS END=44085244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 44085351 . T . PASS END=44085367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:18,0 chr1 44085368 . G . PASS END=44085390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:26,0 chr1 44085391 . G . PASS END=44085395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 44085396 . A . PASS END=44085396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 44085397 . A . PASS END=44085429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1058:0,80,255:33,0 chr1 44085430 . T . PASS END=44085430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1150:0,71,255:31,0 chr1 44085431 . G . PASS END=44085438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1202:0,96,255:32,0 chr1 44085439 . T . PASS END=44085439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 44085440 . G . PASS END=44085453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1158:0,96,255:32,0 chr1 44085454 . C . PASS END=44085464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1023:0,74,255:26,0 chr1 44085465 . C . PASS END=44085467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44085468 . C . PASS END=44085474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 44085475 . T . PASS END=44085481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 44085482 . T . PASS END=44085482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 44085483 . G . PASS END=44085487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 44085488 . G . PASS END=44085499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,74,255:26,0 chr1 44085500 . C . PASS END=44085500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:22,0 chr1 44085501 . A . PASS END=44085505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:23,0 chr1 44085506 . T . PASS END=44085506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 44085507 . G . PASS END=44085519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 44085520 . A . PASS END=44085522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 44085523 . G . PASS END=44085524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44085525 . T . PASS END=44085529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 44085766 . A . PASS END=44085887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:32:0,80,1161:0,80,255:40,0 chr1 44085888 . G . PASS END=44085891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:26,0 chr1 44085892 . G . PASS END=44085892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,98,255:27,0 chr1 44086125 . G . PASS END=44086127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,995:0,87,255:29,0 chr1 44086128 . A . PASS END=44086128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:28,0 chr1 44086129 . A . PASS END=44086129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 44086130 . A . PASS END=44086130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 44086131 . T . PASS END=44086135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1088:0,87,255:30,0 chr1 44086136 . C . PASS END=44086136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 44086137 . C . PASS END=44086140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1103:0,90,255:35,0 chr1 44086141 . A . PASS END=44086141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:33,0 chr1 44086142 . C . PASS END=44086151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1078:0,91,255:34,0 chr1 44086152 . G . PASS END=44086152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:32,0 chr1 44086153 . A . PASS END=44086157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1148:0,85,255:35,0 chr1 44086158 . T . PASS END=44086158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1021:0,74,255:33,0 chr1 44086159 . C . PASS END=44086201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:84:36:0,84,1234:0,84,255:40,0 chr1 44086202 . C . PASS END=44086202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1382:0,79,255:39,0 chr1 44086203 . A . PASS END=44086206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1399:0,96,255:40,0 chr1 44086207 . T . PASS END=44086207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:26:43:0,26,1296:0,26,255:37,0 chr1 44086208 . G . PASS END=44086216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:42:0,90,1398:0,90,255:39,0 chr1 44086217 . T . PASS END=44086217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1348:0,76,255:32,0 chr1 44086218 . A . PASS END=44086225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:38:0,90,1267:0,90,255:37,0 chr1 44086226 . T . PASS END=44086226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:34,0 chr1 44086227 . G . PASS END=44086236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1226:0,91,255:34,0 chr1 44086237 . T . PASS END=44086237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:31,0 chr1 44086238 . C . PASS END=44086245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:32,0 chr1 44086246 . C . PASS END=44086246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1052:0,71,255:31,0 chr1 44086247 . C . PASS END=44086250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1225:0,89,255:33,0 chr1 44086509 . G . PASS END=44086513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 44086514 . G . PASS END=44086520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 44086521 . A . PASS END=44086521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 44086522 . G . PASS END=44086522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 44086523 . G . PASS END=44086523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 44086524 . A . PASS END=44086527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 44086528 . T . PASS END=44086528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 44086529 . C . PASS END=44086540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,917:0,62,255:26,0 chr1 44086541 . G . PASS END=44086541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 44086542 . T . PASS END=44086542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr1 44086543 . T . PASS END=44086546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:28,0 chr1 44086547 . A . PASS END=44086547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr1 44086548 . G . PASS END=44086575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1011:0,84,255:33,0 chr1 44086576 . C . PASS END=44086578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 44086579 . G . PASS END=44086598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1095:0,82,255:31,0 chr1 44086599 . A . PASS END=44086599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 44086600 . T . PASS END=44086613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1172:0,93,255:33,0 chr1 44086614 . A . PASS END=44086614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:31,0 chr1 44086615 . A . PASS END=44086626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1148:0,80,255:32,0 chr1 44086627 . A . PASS END=44086627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 44086628 . G . PASS END=44086633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1065:0,93,255:31,0 chr1 44086634 . A . PASS END=44086634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 44086635 . C . PASS END=44086638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 44086639 . A . PASS END=44086639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:27,0 chr1 44086640 . T . PASS END=44086640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 44086641 . G . PASS END=44086643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:26,0 chr1 44086644 . C . PASS END=44086649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 44086650 . A . PASS END=44086653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr1 44086654 . T . PASS END=44086656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 44086657 . A . PASS END=44086663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:26,0 chr1 44086768 . T . PASS END=44086903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:38:0,98,1357:0,98,255:40,0 chr1 44087606 . G . PASS END=44087674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1264:0,89,255:35,0 chr1 44118847 . A . PASS END=44118984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:34:0,98,1296:0,98,255:40,0 chr1 44119334 . T . PASS END=44119351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1296:0,92,255:36,0 chr1 44121262 . G . PASS END=44121283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:26,0 chr1 44121284 . A . PASS END=44121340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1003:0,80,255:32,0 chr1 44121341 . A . PASS END=44121341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 44121342 . G . PASS END=44121361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 44121362 . G . PASS END=44121364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 44121365 . T . PASS END=44121368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 44121369 . T . PASS END=44121369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 44121370 . A . PASS END=44121372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 44121373 . C . PASS END=44121410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 44121411 . G . PASS END=44121426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 44121427 . A . PASS END=44121427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 44121428 . A . PASS END=44121434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 44121435 . T . PASS END=44121435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 44121436 . A . PASS END=44121437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 44125969 . G . PASS END=44126008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,120,1800:0,139,255:40,0 chr1 44126009 . C . PASS END=44126083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:48:0,120,1800:0,137,255:40,0 chr1 44128565 . C . PASS END=44128565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 44128566 . A . PASS END=44128571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr1 44128572 . A . PASS END=44128572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 44128573 . T . PASS END=44128584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,781:0,61,255:26,0 chr1 44128585 . T . PASS END=44128643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,986:0,81,255:33,0 chr1 44128644 . G . PASS END=44128645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:60:33:0,60,1164:0,60,255:29,0 chr1 44128646 . G . PASS END=44128670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1205:0,89,255:35,0 chr1 44128671 . G . PASS END=44128671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:32,0 chr1 44128672 . C . PASS END=44128687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:36,0 chr1 44128688 . T . PASS END=44128688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:31,0 chr1 44128689 . T . PASS END=44128710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1286:0,89,255:32,0 chr1 44128711 . G . PASS END=44128731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:26,0 chr1 44128732 . C . PASS END=44128732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 44128733 . C . PASS END=44128733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44128734 . T . PASS END=44128745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,676:0,44,255:18,0 chr1 44128746 . A . PASS END=44128746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr1 44128747 . A . PASS END=44128747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 44128748 . C . PASS END=44128748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:16,0 chr1 44128749 . C . PASS END=44128749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 44128750 . A . PASS END=44128751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:17,0 chr1 44128752 . A . PASS END=44128754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,644:0,54,255:18,0 chr1 44128755 . C . PASS END=44128755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 44128756 . C . PASS END=44128758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 44131367 . G . PASS END=44131416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,175,255:40,0 chr1 44132123 . G . PASS END=44132226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:83:52:0,83,1710:0,83,255:40,0 chr1 44132625 . G . PASS END=44132641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1166:0,83,255:34,0 chr1 44132642 . A . PASS END=44132642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:33,0 chr1 44132643 . G . PASS END=44132643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 44132644 . A . PASS END=44132644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1138:0,61,255:34,0 chr1 44132645 . G . PASS END=44132758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,81,255:40,0 chr1 44132759 . G . PASS END=44132762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 44133443 . T . PASS END=44133630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:31:0,85,1119:0,85,255:40,0 chr1 44133631 . G . PASS END=44133631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:33,0 chr1 44133632 . T . PASS END=44133646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,105,255:35,0 chr1 44133647 . A . PASS END=44133647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:25,0 chr1 44133648 . T . PASS END=44133651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 44133652 . A . PASS END=44133652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:26,0 chr1 44133653 . G . PASS END=44133657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44133658 . G . PASS END=44133685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 44133686 . A . PASS END=44133690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 44134771 . C . PASS END=44134946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:37:0,96,1405:0,96,255:40,0 chr1 44134947 . T . PASS END=44134947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:32,0 chr1 44134948 . T . PASS END=44134950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:34,0 chr1 44134951 . G . PASS END=44134951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:31,0 chr1 44134952 . G . PASS END=44134960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:32,0 chr1 44134961 . A . PASS END=44134961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:28,0 chr1 44134962 . C . PASS END=44134962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1113:0,85,255:28,0 chr1 44134963 . C . PASS END=44134968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:25,0 chr1 44134969 . A . PASS END=44134969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:20,0 chr1 44134970 . G . PASS END=44134970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 44135923 . A . PASS END=44136131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:37:0,108,1262:0,111,255:40,0 chr1 44137176 . A . PASS END=44137177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1099:0,80,255:30,0 chr1 44137178 . T . PASS END=44137178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 44137179 . A . PASS END=44137208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1227:0,86,255:35,0 chr1 44137209 . A . PASS END=44137209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1244:0,72,255:35,0 chr1 44137210 . G . PASS END=44137219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1233:0,89,255:35,0 chr1 44137220 . G . PASS END=44137245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr1 44137246 . G . PASS END=44137246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1075:0,63,255:31,0 chr1 44137247 . G . PASS END=44137249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1075:0,85,255:32,0 chr1 44137250 . G . PASS END=44137250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,919:0,16,255:28,0 chr1 44137251 . A . PASS END=44137254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:33,0 chr1 44137255 . A . PASS END=44137255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:31,0 chr1 44137256 . G . PASS END=44137256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1270:0,89,255:32,0 chr1 44137257 . C A, 150.47 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:100:188,103,0,288,288,288:255,105,0:0,0:1.5047e+02,1.0047e+02,0.0000e+00,2.8524e+02,3.2001e+02,2.8825e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,23,12:0,0,23,12 chr1 44137258 . A . PASS END=44137294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,89,255:37,0 chr1 44137295 . G . PASS END=44137307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:31,0 chr1 44137308 . T . PASS END=44137318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 44137319 . G . PASS END=44137319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:23,0 chr1 44137320 . G . PASS END=44137330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 44137331 . A . PASS END=44137335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 44137336 . A . PASS END=44137344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 44137345 . C . PASS END=44137353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 44137354 . T . PASS END=44137372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1039:0,71,255:26,0 chr1 44137373 . A . PASS END=44137389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 44137390 . A . PASS END=44137393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44137394 . A . PASS END=44137395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 44137396 . T . PASS END=44137397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:27,0 chr1 44137398 . A . PASS END=44137399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44137400 . C . PASS END=44137419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,978:0,78,255:26,0 chr1 44137420 . A . PASS END=44137420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:21,0 chr1 44137421 . G . PASS END=44137427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:27:0,66,725:0,66,255:25,0 chr1 44137428 . C . PASS END=44137428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 44137429 . G . PASS END=44137436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,67,255:24,0 chr1 44137437 . T . PASS END=44137437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:20,0 chr1 44137438 . C . PASS END=44137441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,990:0,71,255:24,0 chr1 44137442 . G . PASS END=44137443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 44137444 . G . PASS END=44137444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:25,0 chr1 44137445 . C . PASS END=44137445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44137446 . A . PASS END=44137447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,933:0,43,255:25,0 chr1 44137448 . A . PASS END=44137451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:29:0,60,958:0,60,255:26,0 chr1 44137452 . A . PASS END=44137455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44137456 . C . PASS END=44137456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,910:0,70,255:26,0 chr1 44137457 . A . PASS END=44137457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44137458 . A . PASS END=44137458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,847:0,67,255:25,0 chr1 44137459 . A . PASS END=44137459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,717:0,34,255:23,0 chr1 44137460 . G . PASS END=44137463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 44137464 . A . PASS END=44137465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 44137466 . G . PASS END=44137467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44137468 . C . PASS END=44137468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 44137469 . A . PASS END=44137469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,866:0,45,255:27,0 chr1 44137470 . G . PASS END=44137471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 44137472 . G . PASS END=44137472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,889:0,53,255:27,0 chr1 44137473 . T . PASS END=44137475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,952:0,84,255:28,0 chr1 44137476 . C . PASS END=44137476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,894:0,54,255:27,0 chr1 44137477 . T . PASS END=44137478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1005:0,87,255:29,0 chr1 44137479 . T . PASS END=44137479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 44137480 . G . PASS END=44137481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,991:0,87,255:29,0 chr1 44137482 . G . PASS END=44137483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 44137484 . G . PASS END=44137484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:26,0 chr1 44137485 . A . PASS END=44137487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 44137488 . C . PASS END=44137488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,918:0,60,255:26,0 chr1 44137489 . A . PASS END=44137489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,937:0,29,255:25,0 chr1 44137490 . T . PASS END=44137491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1101:0,80,255:27,0 chr1 44137492 . C . PASS END=44137492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,976:0,24,255:25,0 chr1 44137493 . A . PASS END=44137493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 44137494 . C . PASS END=44137496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,944:0,60,255:27,0 chr1 44137497 . G . PASS END=44137497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 44137498 . G . PASS END=44137498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:9:30:0,9,734:0,9,255:25,0 chr1 44137499 . A . PASS END=44137499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44137500 . A . PASS END=44137500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:26,0 chr1 44137501 . G . PASS END=44137507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr1 44137508 . A . PASS END=44137508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,812:0,53,255:25,0 chr1 44137509 . G . PASS END=44137510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44137511 . G . PASS END=44137511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr1 44137512 . C . PASS END=44137512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 44137513 . C . PASS END=44137523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 44137524 . T . PASS END=44137524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 44137525 . C . PASS END=44137531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44137532 . C . PASS END=44137532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44137533 . G . PASS END=44137537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 44137538 . C . PASS END=44137538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:23,0 chr1 44137539 . T . PASS END=44137546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 44149355 . G . PASS END=44149356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 44149357 . T . PASS END=44149357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 44149358 . G . PASS END=44149394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1055:0,80,255:33,0 chr1 44149395 . A . PASS END=44149395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr1 44149396 . G . PASS END=44149427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1249:0,89,255:37,0 chr1 44149428 . T . PASS END=44149428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:36,0 chr1 44149429 . C . PASS END=44149446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,95,255:37,0 chr1 44149447 . T . PASS END=44149453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:31:0,60,900:0,72,255:26,0 chr1 44149454 . C . PASS END=44149468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,637:0,40,255:19,0 chr1 44149469 . G . PASS END=44149469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 44149470 . A . PASS END=44149475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,576:0,51,255:17,0 chr1 44154585 . A . PASS END=44154736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:34:0,87,1195:0,91,255:40,0 chr1 44154737 . G . PASS END=44154738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 44154739 . C . PASS END=44154741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 44154742 . T . PASS END=44154764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,878:0,61,255:26,0 chr1 44154765 . A . PASS END=44154765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 44154766 . G . PASS END=44154766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 44156516 . G . PASS END=44156702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:32:0,82,1119:0,82,255:40,0 chr1 44156703 . G . PASS END=44156714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:26,0 chr1 44156715 . A . PASS END=44156720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr1 44157167 . G . PASS END=44157243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1271:0,87,255:40,0 chr1 44157927 . G . PASS END=44157982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,137,255:40,0 chr1 44159665 . G . PASS END=44159773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:42:0,95,1485:0,95,255:40,0 chr1 44160380 . A . PASS END=44160387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr1 44160388 . C . PASS END=44160398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1033:0,87,255:29,0 chr1 44160399 . A . PASS END=44160399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 44160400 . G . PASS END=44160403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 44160404 . A . PASS END=44160405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 44160406 . G . PASS END=44160408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 44160409 . A . PASS END=44160410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 44160411 . G . PASS END=44160413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44160414 . C . PASS END=44160414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 44160415 . T . PASS END=44160420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44160421 . C . PASS END=44160421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 44160422 . T . PASS END=44160460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1151:0,83,255:32,0 chr1 44160461 . T . PASS END=44160463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 44160464 . C . PASS END=44160466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 44160467 . G . PASS END=44160493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,992:0,68,255:26,0 chr1 44160494 . A . PASS END=44160494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 44160495 . T . PASS END=44160500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 44160501 . A . PASS END=44160522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:19,0 chr1 44160523 . G . PASS END=44160542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,495:0,32,255:13,0 chr1 44160543 . G . PASS END=44160543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 44160544 . G . PASS END=44160548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 44160549 . A . PASS END=44160549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 44160550 . G . PASS END=44160555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 44160556 . T . PASS END=44160556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:11,0 chr1 44160557 . A . PASS END=44160561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 44160562 . G . PASS END=44160565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 44163514 . C . PASS END=44163677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:31:0,90,1248:0,91,255:40,0 chr1 44163678 . C . PASS END=44163684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:31:0,72,1080:0,86,255:26,0 chr1 44169288 . A . PASS END=44169288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:35,0 chr1 44169289 . G . PASS END=44169398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1184:0,83,255:40,0 chr1 44169399 . A . PASS END=44169401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 44169402 . T . PASS END=44169406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:27,0 chr1 44169407 . G . PASS END=44169407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 44169691 . G . PASS END=44169783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:43:0,80,1469:0,80,255:40,0 chr1 44169901 . T . PASS END=44170041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:41:0,99,1485:0,108,255:40,0 chr1 44201934 . A . PASS END=44202020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:28:0,82,987:0,82,255:40,0 chr1 44202021 . C . PASS END=44202021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1520:0,77,255:40,0 chr1 44202022 . T . PASS END=44202060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1260:0,94,255:40,0 chr1 44202061 . G . PASS END=44202081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr1 44202082 . A . PASS END=44202096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,743:0,50,255:18,0 chr1 44237555 . A . PASS END=44237652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,3:84:99:50:0,116,1565:0,116,255:40,0 chr1 44237653 . T . PASS END=44237685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,4:104:99:95:0,111,1665:0,196,255:40,0 chr1 44237686 . T . PASS END=44237695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,3:102:60:94:0,60,900:0,164,255:25,0 chr1 44237696 . G . PASS END=44237700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,3:83:57:83:0,57,855:0,177,255:19,3 chr1 44237701 . CTTTT CTTT,CTT,CT,C, 135.84 PASS DP=80;MQ=246.97;MQRankSum=4.745;ReadPosRankSum=-0.676;FractionInformativeReads=0.950;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:13,37,12,9,5,0:0.487,0.158,0.118,0.066,0.000:76:4,13,6,6,3,0:9,24,6,3,2,0:3:145,89,12,130,0,53,186,0,218,53,322,89,299,574,142,674,674,674,674,674,674:255,0,255:12,99:1.3584e+02,8.5838e+01,1.2485e+01,1.2672e+02,3.0703e+00,5.3070e+01,1.8281e+02,3.4639e+00,2.2097e+02,5.3464e+01,3.1902e+02,9.1999e+01,3.0175e+02,4.5000e+02,1.4200e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,6.00,9.01,6.00,12.00,9.01,6.00,12.00,12.00,9.01,6.00,12.00,12.00,12.00,9.01,34.77,40.77,40.77,40.77,40.77,37.78:7,6,25,38:6,7,36,27 chr1 44237702 . T . LowGQ END=44237705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:23,77:100:0:86:0,0,0:255,0,255:40,98 chr1 44237706 . T . PASS END=44237706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,6:83:29:83:0,29,2627:0,29,255:40,3 chr1 44237707 . T . PASS END=44237745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,170,255:40,1 chr1 44257773 . A . PASS END=44257820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,136,255:40,0 chr1 44266953 . G . PASS END=44266963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1285:0,92,255:37,0 chr1 44266964 . G . PASS END=44266964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:35,0 chr1 44266965 . C . PASS END=44267034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1173:0,89,255:40,0 chr1 44267035 . A . PASS END=44267044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,73,255:24,0 chr1 44280563 . A . PASS END=44280609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,136,255:40,0 chr1 44290403 . C . PASS END=44290404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 44290405 . C . PASS END=44290410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:22:0,62,845:0,62,255:26,0 chr1 44290411 . G . PASS END=44290416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1015:0,81,255:34,0 chr1 44290417 . T . PASS END=44290417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:33,0 chr1 44290418 . C . PASS END=44290535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:36:0,90,1251:0,91,255:40,0 chr1 44290536 . T . PASS END=44290536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,914:0,79,255:29,0 chr1 44290537 . T . PASS END=44290543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1058:0,83,255:31,0 chr1 44290544 . A . PASS END=44290544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1061:0,46,255:29,0 chr1 44290545 . G . PASS END=44290553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 44290554 . A . PASS END=44290555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 44290556 . G . PASS END=44290556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 44290557 . C . PASS END=44290561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,76,255:23,0 chr1 44290562 . C . PASS END=44290564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 44297423 . A . PASS END=44297466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,206,255:40,0 chr1 44303891 . G . PASS END=44303983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:96:39:0,96,1428:0,99,255:40,0 chr1 44303993 . C . PASS END=44303993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 44323807 . A . PASS END=44323870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,126,255:40,0 chr1 44323958 . A . PASS END=44323980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,130,255:40,0 chr1 44344699 . A . PASS END=44344717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:66:0,120,1800:0,149,255:40,0 chr1 44345007 . T . PASS END=44345010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,121,255:40,0 chr1 44345011 . A . PASS END=44345011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1420:0,74,255:40,0 chr1 44345012 . A . PASS END=44345052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:80:43:0,80,1355:0,80,255:40,0 chr1 44360055 . G . PASS END=44360149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:38:0,93,1360:0,93,255:40,0 chr1 44360152 . A . PASS END=44360152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,117,1755:0,141,255:39,0 chr1 44360155 . T . PASS END=44360155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,114,1710:0,141,255:38,0 chr1 44363884 . A . PASS END=44363974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1008:0,81,255:40,0 chr1 44364739 . C . PASS END=44364940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:31:0,90,1203:0,93,255:40,0 chr1 44365181 . G . PASS END=44365193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1240:0,93,255:36,0 chr1 44365213 . A . PASS END=44365387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,92,255:40,0 chr1 44365388 . A . PASS END=44365395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:29:0,72,1080:0,87,255:26,0 chr1 44365396 . A . PASS END=44365396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:23,0 chr1 44365397 . G . PASS END=44365399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:25,0 chr1 44366421 . C . PASS END=44366465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,101,1800:0,101,255:40,0 chr1 44385604 . G . PASS END=44385604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 44385605 . T . PASS END=44385608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 44385609 . C . PASS END=44385770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1119:0,81,255:40,0 chr1 44385771 . C . PASS END=44385771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 44385772 . C . PASS END=44385818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1193:0,86,255:37,0 chr1 44385819 . C . PASS END=44385819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr1 44385820 . C . PASS END=44385824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 44385825 . G . PASS END=44385825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr1 44385826 . A . PASS END=44386023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1344:0,98,255:40,0 chr1 44386076 . A . PASS END=44386097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1410:0,90,255:37,0 chr1 44386098 . A . PASS END=44386098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,0 chr1 44386099 . A . PASS END=44386099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 44386100 . T . PASS END=44386100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 44386101 . C . PASS END=44386163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:34:0,86,1210:0,86,255:39,0 chr1 44386164 . A . PASS END=44386164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr1 44386165 . G . PASS END=44386177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1127:0,82,255:32,0 chr1 44386178 . A . PASS END=44386183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:74:30:0,74,1100:0,74,255:26,0 chr1 44386184 . A . PASS END=44386184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:25,0 chr1 44386185 . T . PASS END=44386190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:25,0 chr1 44386191 . T . PASS END=44386192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,862:0,45,255:23,0 chr1 44386193 . C . PASS END=44386197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:25:0,66,941:0,67,255:24,0 chr1 44386198 . C . PASS END=44386198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 44386199 . A . PASS END=44386202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 44386203 . A . PASS END=44386207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:23:0,55,778:0,55,255:20,0 chr1 44386208 . C . PASS END=44386208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:18,0 chr1 44386209 . T . PASS END=44386209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44386210 . C . PASS END=44386214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,790:0,53,255:19,0 chr1 44386215 . G . PASS END=44386215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44386216 . C . PASS END=44386216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:20,0 chr1 44386217 . C . PASS END=44386217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 44386218 . G . PASS END=44386222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:22,0 chr1 44386444 . C . PASS END=44386444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 44386454 . A . PASS END=44386454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 44386455 . A . PASS END=44386455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 44386456 . C . PASS END=44386577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:30:0,90,1109:0,90,255:40,0 chr1 44386578 . T . PASS END=44386601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,102,1447:0,112,255:40,0 chr1 44386602 . T . PASS END=44386602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1460:0,55,255:35,0 chr1 44386603 . T . PASS END=44386612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:38:0,87,1305:0,114,255:35,0 chr1 44387115 . C . PASS END=44387121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1270:0,89,255:34,0 chr1 44387122 . C . PASS END=44387122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1160:0,74,255:33,0 chr1 44387123 . C . PASS END=44387190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:35:0,92,1281:0,92,255:40,0 chr1 44387191 . C . PASS END=44387227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1319:0,87,255:40,0 chr1 44387228 . T G, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,21,0:0,20,0:120:208,123,0,1582,123,1582:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,23:0,0,12,29 chr1 44387229 . C . PASS END=44387253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,97,255:34,0 chr1 44387254 . T . PASS END=44387265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,79,255:26,0 chr1 44387266 . G . PASS END=44387267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44387268 . G . PASS END=44387268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 44387269 . G . PASS END=44387293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 44387294 . T . PASS END=44387294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 44387295 . G . PASS END=44387295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 44387296 . C . PASS END=44387296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 44387297 . A . PASS END=44387305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:24,0 chr1 44387306 . T . PASS END=44387306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 44387307 . T . PASS END=44387326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 44387327 . T . PASS END=44387327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 44387328 . G . PASS END=44387380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 44387381 . T . PASS END=44387381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,817:0,26,255:23,0 chr1 44387382 . C . PASS END=44387389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 44387390 . A . PASS END=44387390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44387391 . C . PASS END=44387419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:26,0 chr1 44387420 . C . PASS END=44387436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr1 44387437 . G . PASS END=44387437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 44387438 . A . PASS END=44387438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 44395691 . G . PASS END=44395748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,108,1297:0,108,255:40,0 chr1 44395749 . G . PASS END=44395758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,122,255:40,0 chr1 44395804 . T . PASS END=44395823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,111,1696:0,111,255:40,0 chr1 44395824 . G . PASS END=44395890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,89,255:40,0 chr1 44395891 . T . PASS END=44395893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 44401329 . A . PASS END=44401346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1260:0,89,255:35,0 chr1 44401347 . G . PASS END=44401371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:31,0 chr1 44401372 . C . PASS END=44401383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:25,0 chr1 44401384 . A G, 128.26 PASS DP=28;MQ=245.63;FractionInformativeReads=0.964 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,13,0:0,14,0:78:166,81,0,1039,81,1039:255,81,0:0,0:1.2826e+02,7.8259e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,16:0,0,13,14 chr1 44401385 . G . PASS END=44401388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,919:0,78,255:26,0 chr1 44401654 . A . PASS END=44401816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1280:0,81,255:40,0 chr1 44401817 . A . PASS END=44401817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1111:0,50,255:27,0 chr1 44401818 . G . PASS END=44401837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,97,255:32,0 chr1 44401838 . C . PASS END=44401838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 44401839 . C . PASS END=44401852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:34:0,84,1260:0,91,255:33,0 chr1 44401853 . C . PASS END=44401853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 44401854 . C . PASS END=44401898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1156:0,83,255:39,0 chr1 44401899 . G . PASS END=44401899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr1 44401900 . C . PASS END=44401911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1313:0,100,255:40,0 chr1 44401974 . G . PASS END=44401982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 44401983 . C . PASS END=44402001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,65,255:26,0 chr1 44402002 . A . PASS END=44402006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 44402007 . C . PASS END=44402010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 44402011 . G . PASS END=44402040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 44402041 . G . PASS END=44402041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 44402042 . C . PASS END=44402045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:14,0 chr1 44402046 . C . PASS END=44402055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 44402056 . A . PASS END=44402056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:8,0 chr1 44402057 . C . PASS END=44402057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 44402058 . C . PASS END=44402061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:14:0,21,315:0,42,255:7,0 chr1 44402062 . A . PASS END=44402064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:12:14:0,12,180:0,42,255:4,0 chr1 44402065 . T . LowGQ END=44402197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 44402198 . G . PASS END=44402200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 44402201 . G . PASS END=44402248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 44402249 . T . PASS END=44402249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 44402250 . C . PASS END=44402255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 44402256 . A . PASS END=44402256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 44402257 . C . PASS END=44402259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:13,0 chr1 44402260 . C . PASS END=44402261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 44402262 . T . PASS END=44402319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 44402320 . C . PASS END=44402320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 44402321 . G . PASS END=44402346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 44402347 . G . PASS END=44402347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 44402348 . C . PASS END=44402348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 44402349 . G . LowGQ END=44402349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:11,0 chr1 44402350 . C . PASS END=44402373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:13,0 chr1 44402374 . C . PASS END=44402374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 44402375 . G . PASS END=44402379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,44,255:13,0 chr1 44402380 . C . PASS END=44402382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 44402383 . C . PASS END=44402401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 44402402 . C . PASS END=44402402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 44402403 . G . PASS END=44402407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 44402408 . T . PASS END=44402419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 44402420 . T . PASS END=44402420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 44402421 . G . PASS END=44402421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 44402422 . C . PASS END=44402424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 44402425 . C . PASS END=44402437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr1 44413273 . A . PASS END=44413274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 44413275 . G . PASS END=44413285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1052:0,90,255:30,0 chr1 44413286 . A . PASS END=44413286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 44413287 . G . PASS END=44413289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 44413290 . G . PASS END=44413290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 44413291 . C . PASS END=44413329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1156:0,92,255:36,0 chr1 44413330 . G . PASS END=44413330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:34,0 chr1 44413331 . A . PASS END=44413356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1182:0,89,255:35,0 chr1 44415089 . G . PASS END=44415112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,673:0,41,255:20,0 chr1 44415113 . C . PASS END=44415126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:22,0 chr1 44415127 . T . PASS END=44415127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 44415128 . A . PASS END=44415134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr1 44415135 . T . PASS END=44415135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 44415136 . G . PASS END=44415137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,869:0,69,255:26,0 chr1 44415138 . C . PASS END=44415140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 44415141 . A . PASS END=44415141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44415142 . G . PASS END=44415142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44415143 . A . PASS END=44415143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,909:0,32,255:26,0 chr1 44415144 . A . PASS END=44415145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44415146 . T . PASS END=44415151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44415152 . A . PASS END=44415156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44415157 . G . PASS END=44415157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 44415158 . G . PASS END=44415164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 44415165 . T . PASS END=44415165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 44415166 . C . PASS END=44415166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44415167 . T . PASS END=44415174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44415175 . G . PASS END=44415214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,942:0,81,255:31,0 chr1 44415215 . G . PASS END=44415215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:26,0 chr1 44415216 . T . PASS END=44415221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 44415222 . A . PASS END=44415225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 44415226 . C . PASS END=44415229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44415230 . T . PASS END=44415230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:26,0 chr1 44415231 . A . PASS END=44415260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,987:0,84,255:30,0 chr1 44415261 . T . PASS END=44415261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,964:0,60,255:28,0 chr1 44415262 . C . PASS END=44415262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 44415263 . T . PASS END=44415263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:30,0 chr1 44415264 . C . PASS END=44415274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 44415275 . A . PASS END=44415275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 44415276 . G . PASS END=44415276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 44415277 . T . PASS END=44415310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,947:0,64,255:26,0 chr1 44415311 . G . PASS END=44415311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 44415312 . C . PASS END=44415330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,856:0,64,255:25,0 chr1 44415331 . C . PASS END=44415331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 44415332 . A . PASS END=44415336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 44415337 . C . PASS END=44415337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 44415338 . T . PASS END=44415344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 44415345 . G . PASS END=44415345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 44415346 . T . PASS END=44415347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 44415348 . G . PASS END=44415348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 44415349 . C . PASS END=44415355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 44415356 . A . PASS END=44415357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:18,0 chr1 44415358 . T . PASS END=44415360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44415361 . A . PASS END=44415363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:49:22:0,49,715:0,49,255:19,0 chr1 44415364 . G . PASS END=44415371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,921:0,62,255:23,0 chr1 44415372 . T . PASS END=44415372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 44415373 . G . PASS END=44415377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 44415378 . T . PASS END=44415381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 44415382 . A . PASS END=44415382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:19,0 chr1 44415383 . C . PASS END=44415386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44415387 . C . PASS END=44415387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44415388 . C . PASS END=44415396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 44415397 . T . PASS END=44415397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,736:0,52,255:20,0 chr1 44415398 . C . PASS END=44415400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 44415401 . A . PASS END=44415401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 44415402 . G . PASS END=44415411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:21,0 chr1 44415412 . T . PASS END=44415412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 44415413 . G . PASS END=44415414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,807:0,63,255:22,0 chr1 44415415 . C T, 112.75 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,12,0:0,10,0:63:151,66,0,807,66,807:255,66,0:0,0:1.1275e+02,6.2746e+01,2.3297e-06,4.5000e+02,9.7516e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,15:0,0,5,17 chr1 44415416 . G . PASS END=44415417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 44415418 . T . PASS END=44415418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 44415419 . T . PASS END=44415422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 44415423 . C . PASS END=44415423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 44415424 . A . PASS END=44415428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 44415429 . C . PASS END=44415429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 44415430 . T . PASS END=44415430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 44415431 . G . PASS END=44415431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 44415432 . T . PASS END=44415432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 44415433 . G . PASS END=44415437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,995:0,84,255:29,0 chr1 44415438 . A . PASS END=44415438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 44415439 . T . PASS END=44415452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1241:0,86,255:32,0 chr1 44415453 . T . PASS END=44415488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1172:0,83,255:33,0 chr1 44415489 . G . PASS END=44415491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 44415492 . G . PASS END=44415494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44415495 . T . PASS END=44415496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 44415497 . G . PASS END=44415497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44415498 . C . PASS END=44415557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:26,0 chr1 44415558 . A . PASS END=44415559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:26:0,50,855:0,50,255:19,0 chr1 44415560 . C . PASS END=44415563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44415564 . A . PASS END=44415571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,573:0,47,255:19,0 chr1 44415572 . G . PASS END=44415587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 44415588 . C . PASS END=44415588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 44415589 . G . PASS END=44415589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44415590 . G . PASS END=44415621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 44415622 . G . PASS END=44415626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 44415627 . T . PASS END=44415627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 44415628 . G . PASS END=44415636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,32,255:13,0 chr1 44415637 . G . PASS END=44415641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr1 44415642 . G . PASS END=44415655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 44415656 . G . PASS END=44415656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 44415657 . T . PASS END=44415658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 44415659 . C . PASS END=44415664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 44415665 . A . PASS END=44415665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 44415666 . A . PASS END=44415668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 44415669 . T . PASS END=44415669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 44415670 . G . PASS END=44415670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 44415671 . C . PASS END=44415672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 44415673 . C . PASS END=44415673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 44415674 . A . PASS END=44415676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 44415677 . T . PASS END=44415677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:12,0 chr1 44415678 . G . PASS END=44415681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 44415682 . C . PASS END=44415707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:17,0 chr1 44415708 . C . PASS END=44415708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,0 chr1 44415709 . G . PASS END=44415719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 44415720 . G . PASS END=44415744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 44415745 . T . PASS END=44415745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:21,1 chr1 44415746 . G . PASS END=44415746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:31:22:0,31,779:0,31,255:21,1 chr1 44415747 . C . PASS END=44415747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:22,0 chr1 44415748 . T . PASS END=44415767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,807:0,66,255:23,0 chr1 44415768 . T . PASS END=44415768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 44415769 . C . PASS END=44415783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,886:0,66,255:24,0 chr1 44415784 . G . PASS END=44415784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 44415785 . G . PASS END=44415786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 44415787 . G . PASS END=44415790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 44415791 . A . PASS END=44415791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:17,0 chr1 44415792 . T . PASS END=44415792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:16,0 chr1 44415793 . T . PASS END=44415794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:17,0 chr1 44415795 . T . PASS END=44415819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,590:0,40,255:18,0 chr1 44415820 . C . PASS END=44415825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 44421992 . G . PASS END=44422001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,750:0,69,255:24,0 chr1 44422002 . A . PASS END=44422002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 44422003 . C . PASS END=44422006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr1 44422007 . C . PASS END=44422016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 44422017 . A . PASS END=44422017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 44422018 . T . PASS END=44422020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr1 44422021 . C . PASS END=44422021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 44422022 . G . PASS END=44422024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 44422025 . G . PASS END=44422025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 44422026 . G . PASS END=44422036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr1 44422037 . G . PASS END=44422037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 44422038 . C . PASS END=44422038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 44422039 . A . PASS END=44422039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 44422040 . G . PASS END=44422056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1111:0,80,255:31,0 chr1 44422057 . C . PASS END=44422058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 44422059 . G . PASS END=44422061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 44422062 . C . PASS END=44422065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 44422066 . A . PASS END=44422075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 44422076 . G . PASS END=44422115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,922:0,62,255:26,0 chr1 44422116 . G . PASS END=44422116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 44422117 . G . PASS END=44422129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:21,0 chr1 44422130 . C . PASS END=44422132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 44422232 . G . PASS END=44422266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,837:0,66,255:26,0 chr1 44422267 . T . PASS END=44422277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 44422278 . G . PASS END=44422284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 44422285 . T . PASS END=44422309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 44422310 . T . PASS END=44422350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:26,0 chr1 44422351 . T . PASS END=44422351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 44422352 . C . PASS END=44422365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:23,0 chr1 44422366 . C . PASS END=44422367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,75,255:18,0 chr1 44422368 . C . PASS END=44422370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 44422371 . C . PASS END=44422371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:21,0 chr1 44422372 . A . PASS END=44422373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr1 44422482 . G . PASS END=44422482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44422483 . A . PASS END=44422483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 44422484 . T . PASS END=44422484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 44422485 . G . PASS END=44422485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:28,0 chr1 44422486 . A . PASS END=44422494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 44422495 . C . PASS END=44422495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 44422496 . C . PASS END=44422547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1177:0,80,255:37,0 chr1 44422548 . T . PASS END=44422548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 44422549 . T . PASS END=44422629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1186:0,83,255:40,0 chr1 44422630 . A . PASS END=44422630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 44422631 . G . PASS END=44422631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 44422632 . C . PASS END=44422648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,931:0,67,255:26,0 chr1 44422867 . G . PASS END=44422987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:90:43:0,90,1454:0,90,255:40,0 chr1 44423074 . C . PASS END=44423221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:83:42:0,83,1530:0,83,255:40,0 chr1 44423649 . G . PASS END=44423809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1215:0,93,255:40,0 chr1 44423810 . A . PASS END=44423826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 44423827 . C . PASS END=44423829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:47:26:0,47,855:0,47,255:19,0 chr1 44423830 . G . PASS END=44423830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 44423914 . G . PASS END=44423940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1321:0,95,255:38,0 chr1 44424133 . A . PASS END=44424140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 44424141 . G . PASS END=44424170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1078:0,80,255:30,0 chr1 44424171 . C . PASS END=44424173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 44424174 . G . PASS END=44424198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1019:0,87,255:29,0 chr1 44424199 . A . PASS END=44424199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 44424200 . T . PASS END=44424203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 44424204 . T . PASS END=44424204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 44424205 . A . PASS END=44424205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44424206 . A . PASS END=44424212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,986:0,67,255:26,0 chr1 44424213 . G . PASS END=44424216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44424217 . T . PASS END=44424217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 44424218 . C . PASS END=44424227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:29,0 chr1 44424228 . A . PASS END=44424228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:25,0 chr1 44424229 . C . PASS END=44424229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 44424230 . C . PASS END=44424234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1062:0,74,255:26,0 chr1 44424235 . A . PASS END=44424237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 44424238 . C . PASS END=44424248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:26,0 chr1 44424249 . G . PASS END=44424249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 44424250 . A . PASS END=44424250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,878:0,50,255:26,0 chr1 44424251 . A . PASS END=44424252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 44424253 . C . PASS END=44424259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 44424260 . A . PASS END=44424260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:23,0 chr1 44424261 . G . PASS END=44424265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,947:0,65,255:25,0 chr1 44424266 . T . PASS END=44424267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 44424418 . C . PASS END=44424419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 44424420 . C . PASS END=44424420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 44424421 . A . PASS END=44424421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44424422 . A . PASS END=44424422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 44424423 . T . PASS END=44424431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1180:0,90,255:31,0 chr1 44424432 . C . PASS END=44424432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 44424433 . A . PASS END=44424442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 44424443 . T . PASS END=44424478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1083:0,86,255:33,0 chr1 44424479 . C . PASS END=44424521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,74,255:26,0 chr1 44424522 . T . PASS END=44424522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 44424523 . G . PASS END=44424525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 44424526 . C . PASS END=44424526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 44424527 . T . PASS END=44424536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 44424537 . G . PASS END=44424537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 44424538 . C . PASS END=44424548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 44424549 . G . PASS END=44424561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 44425921 . G . PASS END=44425987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,185,255:40,0 chr1 44425988 . C . PASS END=44426001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,180,255:40,0 chr1 44426548 . G . PASS END=44426650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,105,1575:0,108,255:40,0 chr1 44426651 . T . PASS END=44426651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1410:0,79,255:33,0 chr1 44426652 . C . PASS END=44426662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:40:0,96,1440:0,96,255:39,0 chr1 44426663 . C . PASS END=44426663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1388:0,73,255:30,0 chr1 44426664 . T . PASS END=44426674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:33:0,96,1211:0,99,255:33,0 chr1 44426675 . T . PASS END=44426675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr1 44426676 . C . PASS END=44426678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 44426679 . T . PASS END=44426679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:30,0 chr1 44426680 . C . PASS END=44426683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 44426684 . A . PASS END=44426684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1039:0,49,255:26,0 chr1 44426685 . G . PASS END=44426685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 44426838 . C . PASS END=44426910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:36:0,97,1243:0,97,255:40,0 chr1 44426911 . T . PASS END=44426934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,105,1575:0,116,255:40,0 chr1 44429941 . G . PASS END=44429993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,5:67:99:59:0,118,1800:0,118,255:40,0 chr1 44432196 . A . PASS END=44432313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:37:0,108,1520:0,110,255:40,0 chr1 44432396 . C . PASS END=44432423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:40:0,81,1376:0,81,255:40,0 chr1 44432424 . A . PASS END=44432424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr1 44432425 . C . PASS END=44432429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1457:0,82,255:38,0 chr1 44432430 . T . PASS END=44432430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1474:0,74,255:36,0 chr1 44432431 . G . PASS END=44432431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1537:0,90,255:36,0 chr1 44432432 . T . PASS END=44432432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1412:0,54,255:35,0 chr1 44432433 . C . PASS END=44432434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:41:0,85,1496:0,85,255:36,0 chr1 44432435 . A . PASS END=44432435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1347:0,51,255:32,0 chr1 44432436 . G . PASS END=44432439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1440:0,84,255:34,0 chr1 44432440 . T . PASS END=44432447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr1 44432448 . C . PASS END=44432449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 44432450 . T . PASS END=44432451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1226:0,66,255:32,0 chr1 44432452 . T . PASS END=44432452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,980:0,46,255:31,0 chr1 44432453 . T . PASS END=44432453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 44432454 . T . PASS END=44432454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 44432602 . A . PASS END=44432609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1203:0,86,255:34,0 chr1 44432610 . G . PASS END=44432611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1157:0,66,255:29,0 chr1 44432612 . T . PASS END=44432614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:29,0 chr1 44432615 . C . PASS END=44432615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 44432616 . T . PASS END=44432659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1271:0,89,255:37,0 chr1 44432660 . A . PASS END=44432672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:66:27:0,66,990:0,81,255:26,0 chr1 44432673 . G . PASS END=44432673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:20,0 chr1 44432674 . C . PASS END=44432681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:22,0 chr1 44432682 . A . PASS END=44432683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 44432684 . T . PASS END=44432686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 44432687 . T . PASS END=44432687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 44432688 . G . PASS END=44432688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44432689 . G . PASS END=44432691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:19,0 chr1 44432987 . G . PASS END=44432990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,881:0,78,255:26,0 chr1 44432991 . T . PASS END=44433004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 44433005 . T . PASS END=44433005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 44433006 . C . PASS END=44433006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44433007 . C . PASS END=44433007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 44433008 . C . PASS END=44433009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 44433010 . C . PASS END=44433011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44433012 . G . PASS END=44433013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44433014 . C . PASS END=44433014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1100:0,63,255:29,0 chr1 44433015 . T . PASS END=44433027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1065:0,93,255:31,0 chr1 44433028 . T . PASS END=44433028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 44433029 . G . PASS END=44433058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:32:0,86,1127:0,86,255:34,0 chr1 44433059 . T . PASS END=44433059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:31,0 chr1 44433060 . G . PASS END=44433066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1235:0,88,255:33,0 chr1 44433067 . C . PASS END=44433067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 44433068 . C . PASS END=44433077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1260:0,105,255:35,0 chr1 44433078 . T . PASS END=44433078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr1 44433079 . G . PASS END=44433138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1131:0,80,255:35,0 chr1 44433139 . G . PASS END=44433139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44433140 . A . PASS END=44433140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44433141 . A . PASS END=44433150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,959:0,65,255:26,0 chr1 44433151 . C . PASS END=44433151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 44433152 . A . PASS END=44433153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr1 44433154 . C . PASS END=44433154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 44433155 . C . PASS END=44433159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:22,0 chr1 44433160 . G . PASS END=44433161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:47:26:0,47,922:0,47,255:23,0 chr1 44433162 . T . PASS END=44433162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:23,0 chr1 44433163 . C . PASS END=44433163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:23,0 chr1 44433164 . C . PASS END=44433164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 44433165 . T . PASS END=44433167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 44433168 . G . PASS END=44433168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 44433258 . C . PASS END=44433264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 44433265 . G . PASS END=44433303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:30,0 chr1 44433304 . A . PASS END=44433308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44433309 . G . PASS END=44433309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44433310 . C . PASS END=44433314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44433315 . C . PASS END=44433325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 44433326 . A . PASS END=44433354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,986:0,78,255:26,0 chr1 44435848 . A . PASS END=44435853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr1 44435854 . T . PASS END=44435854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 44435855 . C . PASS END=44435856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 44435857 . A . PASS END=44435870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr1 44435871 . T . PASS END=44435871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 44435872 . G . PASS END=44435878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44435879 . C . PASS END=44435879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 44435880 . G . PASS END=44435893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:31,0 chr1 44435894 . A . PASS END=44435894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:30,0 chr1 44435895 . G . PASS END=44435895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 44435896 . A . PASS END=44435896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,964:0,63,255:30,0 chr1 44435897 . C . PASS END=44435934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:32,0 chr1 44435935 . G . PASS END=44435959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 44435960 . T . PASS END=44435960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 44435961 . C . PASS END=44435963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 44435964 . T . PASS END=44435965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,823:0,55,255:23,0 chr1 44435966 . G . PASS END=44435974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,841:0,72,255:24,0 chr1 44435975 . G . PASS END=44435975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr1 44435976 . C . PASS END=44435980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44435981 . T . PASS END=44435993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr1 44435994 . A . PASS END=44435994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 44436268 . G . PASS END=44436454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:34:0,90,1213:0,91,255:40,0 chr1 44436455 . G . PASS END=44436455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:30,0 chr1 44436456 . C . PASS END=44436478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1042:0,80,255:31,0 chr1 44436479 . T . PASS END=44436479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:27,0 chr1 44436480 . G . PASS END=44436481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 44436578 . T . PASS END=44436620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,104,1631:0,104,255:40,0 chr1 44436638 . C . PASS END=44436892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:36:0,93,1296:0,94,255:40,0 chr1 44436956 . A . PASS END=44437089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1087:0,80,255:40,0 chr1 44437090 . C . PASS END=44437090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr1 44437091 . C . PASS END=44437135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1127:0,82,255:34,0 chr1 44437136 . T . PASS END=44437136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr1 44437137 . C . PASS END=44437140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1318:0,92,255:34,0 chr1 44437141 . G . PASS END=44437141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr1 44437142 . A . PASS END=44437142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 44437143 . G . PASS END=44437143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 44437144 . T . PASS END=44437164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1044:0,81,255:34,0 chr1 44437165 . G . PASS END=44437165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1147:0,52,255:28,0 chr1 44437166 . C . PASS END=44437251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1163:0,80,255:35,0 chr1 44437252 . T . PASS END=44437252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:33,0 chr1 44437253 . G . PASS END=44437308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:36,0 chr1 44437309 . A . PASS END=44437318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1033:0,73,255:26,0 chr1 44437319 . T . PASS END=44437319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:23,0 chr1 44437320 . C . PASS END=44437322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 44437323 . G . PASS END=44437323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:23,0 chr1 44437324 . C . PASS END=44437330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:23,0 chr1 44437331 . G . PASS END=44437331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 44437332 . A . PASS END=44437357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,840:0,62,255:25,0 chr1 44437358 . G . PASS END=44437358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44437359 . C . PASS END=44437375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 44437376 . A . PASS END=44437376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:22,0 chr1 44437377 . G . PASS END=44437377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 44437378 . G . PASS END=44437378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 44437379 . G . PASS END=44437379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 44437380 . C . PASS END=44437384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 44437385 . A . PASS END=44437385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:21,0 chr1 44437386 . G . PASS END=44437392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,71,255:22,0 chr1 44437393 . T . PASS END=44437393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 44437394 . C . PASS END=44437396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 44437397 . G . PASS END=44437397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:21,0 chr1 44437398 . T . PASS END=44437405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,783:0,66,255:22,0 chr1 44437406 . G . PASS END=44437409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44437410 . G . PASS END=44437410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44437411 . A . PASS END=44437415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 44437416 . C . PASS END=44437429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 44437430 . C . PASS END=44437430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 44437431 . T . PASS END=44437448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:25,0 chr1 44437449 . G . PASS END=44437449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44437450 . T . PASS END=44437450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 44437451 . G . PASS END=44437451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44437452 . T . PASS END=44437453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 44437454 . G . PASS END=44437586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1093:0,81,255:36,0 chr1 44437587 . T . PASS END=44437587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:29,0 chr1 44437588 . A . PASS END=44437605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1200:0,83,255:30,0 chr1 44437606 . T . PASS END=44437606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 44437607 . G . PASS END=44437618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1102:0,87,255:29,0 chr1 44437619 . C . PASS END=44437619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 44437620 . A . PASS END=44437629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr1 44437630 . T . PASS END=44437630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 44437631 . A . PASS END=44437644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 44437645 . T . PASS END=44437645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44437646 . A . PASS END=44437647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44437648 . A . PASS END=44437648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:27,0 chr1 44437649 . C . PASS END=44437649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 44437650 . T . PASS END=44437650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 44437651 . G . PASS END=44437659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 44437660 . T . PASS END=44437674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,947:0,77,255:26,0 chr1 44437675 . C . PASS END=44437675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44437676 . T . PASS END=44437676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:26,0 chr1 44437677 . G . PASS END=44437679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44437680 . A . PASS END=44437707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,945:0,62,255:26,0 chr1 44437708 . T . PASS END=44437708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 44437709 . C . PASS END=44437733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 44437734 . T . PASS END=44437738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,662:0,46,255:19,0 chr1 44437739 . C . PASS END=44437739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44437740 . C . PASS END=44437742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44437830 . G . PASS END=44437843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:17,0 chr1 44437844 . G . PASS END=44437844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 44437845 . T . PASS END=44437847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 44437848 . C . PASS END=44437848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 44437849 . T . PASS END=44437850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,509:0,51,255:17,0 chr1 44437851 . T . PASS END=44437851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 44437852 . C . PASS END=44437878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 44437879 . A . PASS END=44437896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,665:0,41,255:19,0 chr1 44437897 . C . PASS END=44437897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 44437898 . A . PASS END=44437900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,684:0,46,255:21,0 chr1 44437901 . A . PASS END=44437903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 44437904 . G . PASS END=44437904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 44437905 . G . PASS END=44437916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,781:0,66,255:25,0 chr1 44437917 . C . PASS END=44437918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 44437919 . C . PASS END=44437929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr1 44437930 . G . PASS END=44437930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 44437931 . A . PASS END=44437938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 44437939 . A . PASS END=44437940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,813:0,41,255:23,0 chr1 44437941 . A . PASS END=44437946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 44437947 . A . PASS END=44437947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 44437948 . T . PASS END=44437949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 44437950 . G . PASS END=44437950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:24,0 chr1 44437951 . A . PASS END=44437958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 44437959 . C . PASS END=44437959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44437960 . T . PASS END=44437960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 44437961 . C . PASS END=44437961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44437962 . T . PASS END=44437966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 44437967 . C . PASS END=44437968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44437969 . A . PASS END=44437989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,847:0,68,255:26,0 chr1 44437990 . T . PASS END=44437990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 44437991 . G . PASS END=44437993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44437994 . A . PASS END=44437994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr1 44437995 . G . PASS END=44437997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 44437998 . G . PASS END=44437998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:20,0 chr1 44437999 . T . PASS END=44438003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 44438004 . C . PASS END=44438005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44438006 . G . PASS END=44438008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44438009 . A . PASS END=44438041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,52,255:19,0 chr1 44438042 . T . PASS END=44438042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 44438043 . T . PASS END=44438047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 44438048 . A . PASS END=44438048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44438049 . G . PASS END=44438049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 44438050 . A . PASS END=44438051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44438052 . G . PASS END=44438053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,798:0,53,255:19,0 chr1 44438054 . A . PASS END=44438054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44438055 . G . PASS END=44438055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr1 44438056 . C . PASS END=44438056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44438057 . G . PASS END=44438059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 44438060 . C . PASS END=44438064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 44438065 . A . PASS END=44438065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 44438066 . C . PASS END=44438088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:23,0 chr1 44438089 . T . PASS END=44438089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 44438090 . C . PASS END=44438090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44438091 . A . PASS END=44438091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 44438092 . T . PASS END=44438093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 44438094 . C . PASS END=44438094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 44438095 . C . PASS END=44438103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 44438104 . C . PASS END=44438104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 44438105 . G . PASS END=44438107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44438108 . G . PASS END=44438108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 44438109 . C . PASS END=44438114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 44438115 . A . PASS END=44438123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 44438124 . G . PASS END=44438128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 44438129 . G . PASS END=44438129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 44438130 . C . PASS END=44438131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 44438132 . T . PASS END=44438143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 44438144 . C . PASS END=44438145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 44438146 . G . PASS END=44438155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,659:0,41,255:19,0 chr1 44438156 . C . PASS END=44438159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 44438160 . G . PASS END=44438194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 44438195 . A . PASS END=44438195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 44438196 . T . PASS END=44438203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 44438204 . G . PASS END=44438211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr1 44440713 . A . PASS END=44440715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 44440716 . A . PASS END=44440716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 44440717 . C . PASS END=44440719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 44440720 . G . PASS END=44440722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 44440723 . T . PASS END=44440837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1019:0,80,255:38,0 chr1 44440838 . C . PASS END=44440838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 44440839 . T . PASS END=44440861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,88,255:35,0 chr1 44440862 . G . PASS END=44440886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 44440887 . C . PASS END=44440905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:18,0 chr1 44440906 . T . PASS END=44440906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr1 44440907 . T . PASS END=44440907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 44440908 . G . PASS END=44440917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 44440918 . G . PASS END=44440918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:12,0 chr1 44440919 . G . PASS END=44440926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44440927 . A . PASS END=44440928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 44440929 . T . PASS END=44440950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,488:0,39,255:13,0 chr1 44440951 . T . PASS END=44440951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 44440952 . C . PASS END=44440953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 44440954 . A . PASS END=44440954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 44440955 . G . PASS END=44440956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,451:0,39,255:13,0 chr1 44440957 . T . PASS END=44440957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:9,0 chr1 44440958 . G . PASS END=44440958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 44440959 . C . PASS END=44440979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:22:9:0,22,304:0,22,255:9,0 chr1 44441337 . C . PASS END=44441410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:30:0,90,1125:0,90,255:40,0 chr1 44441472 . G . PASS END=44441520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,119,1800:0,119,255:40,0 chr1 44441762 . G . PASS END=44441837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:36:0,95,1328:0,95,255:40,0 chr1 44441838 . G . PASS END=44441838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 44441839 . C . PASS END=44441845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1429:0,104,255:38,0 chr1 44441974 . G . PASS END=44441975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:26,0 chr1 44441976 . G . PASS END=44441979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,939:0,67,255:25,0 chr1 44441980 . C . PASS END=44441981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:52:30:0,52,978:0,52,255:25,0 chr1 44441982 . A . PASS END=44441984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1086:0,74,255:25,0 chr1 44441985 . T . PASS END=44441985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:26,0 chr1 44441986 . T . PASS END=44441991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 44441992 . C . PASS END=44441992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 44441993 . T . PASS END=44441997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 44441998 . C . PASS END=44441998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 44441999 . A . PASS END=44441999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 44442000 . T . PASS END=44442001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 44442002 . A . PASS END=44442002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 44442003 . T . PASS END=44442003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:28,0 chr1 44442004 . T . PASS END=44442006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:29:0,62,1024:0,62,255:29,0 chr1 44442007 . T . PASS END=44442007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 44442008 . G . PASS END=44442008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 44442009 . G . PASS END=44442009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr1 44442010 . A . PASS END=44442011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 44442012 . G . PASS END=44442016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1056:0,62,255:29,0 chr1 44442017 . A . PASS END=44442019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:29,0 chr1 44442020 . G . PASS END=44442020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 44442021 . C . PASS END=44442027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 44442028 . G . PASS END=44442028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr1 44442029 . A . PASS END=44442031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 44442032 . A . PASS END=44442032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:44:31:0,44,1036:0,44,255:28,0 chr1 44442033 . A . PASS END=44442033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 44442034 . G . PASS END=44442034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 44442035 . A . PASS END=44442035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:27,0 chr1 44442036 . C . PASS END=44442043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 44442044 . C . PASS END=44442051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 44442262 . C . PASS END=44442331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:29:0,83,1057:0,83,255:36,0 chr1 44442445 . C . PASS END=44442483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1512:0,107,255:40,0 chr1 44442484 . A . PASS END=44442496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1372:0,98,255:37,0 chr1 44442698 . G . PASS END=44442698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 44442699 . C . PASS END=44442704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 44442705 . C . PASS END=44442705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 44442706 . A . PASS END=44442712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr1 44442713 . G . PASS END=44442743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:19,0 chr1 44442744 . C . PASS END=44442749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 44442750 . T . PASS END=44442750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 44442751 . G . PASS END=44442768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:24,0 chr1 44442769 . G . PASS END=44442769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 44442770 . T . PASS END=44442775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,919:0,78,255:26,0 chr1 44442776 . G . PASS END=44442776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 44442777 . T . PASS END=44442778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 44442779 . G . PASS END=44443083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:29:0,84,1083:0,85,255:40,0 chr1 44443653 . A . PASS END=44443679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,143,255:40,0 chr1 44445684 . A . PASS END=44445718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,198,255:40,0 chr1 44446781 . G . PASS END=44446802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:24,0 chr1 44446803 . C . PASS END=44446803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 44446804 . C . PASS END=44446806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 44446807 . T . PASS END=44446807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 44446808 . G . PASS END=44446834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:26,0 chr1 44446835 . G . PASS END=44446847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:32,0 chr1 44446848 . G . PASS END=44446848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 44446849 . G . PASS END=44446902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1096:0,90,255:34,0 chr1 44446903 . T . PASS END=44446903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 44446904 . C . PASS END=44446908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:30,0 chr1 44446909 . T . PASS END=44446913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 44446914 . G . PASS END=44446914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:22,0 chr1 44446915 . T . PASS END=44446924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,80,255:26,0 chr1 44446925 . C . PASS END=44446929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 44446930 . A . PASS END=44446930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 44446931 . C . PASS END=44446935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1123:0,80,255:29,0 chr1 44446936 . A . PASS END=44446943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:30:0,72,1080:0,80,255:26,0 chr1 44446944 . C . PASS END=44446948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 44446949 . G . PASS END=44446949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 44446950 . G . PASS END=44446950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 44446951 . C . PASS END=44446951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 44446952 . C . PASS END=44446962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,967:0,87,255:29,0 chr1 44446963 . G . PASS END=44446963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr1 44446964 . C . PASS END=44446964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 44446965 . T . PASS END=44446965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 44446966 . T . PASS END=44446973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 44446974 . C . PASS END=44446974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 44446975 . G . PASS END=44446978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44446979 . C . PASS END=44447005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 44447006 . T . PASS END=44447006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 44447007 . A . PASS END=44447009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 44447010 . A . PASS END=44447010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 44447011 . G . PASS END=44447012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 44447013 . A . PASS END=44447013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 44447014 . G . PASS END=44447045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,778:0,66,255:24,0 chr1 44447046 . G . PASS END=44447046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 44447047 . C . PASS END=44447051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 44447052 . G . PASS END=44447052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr1 44447053 . C . PASS END=44447055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44447056 . C . PASS END=44447081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:18,0 chr1 44447082 . A . PASS END=44447085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,54,255:13,0 chr1 44447086 . C . PASS END=44447091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 44447092 . C . PASS END=44447093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,585:0,35,255:13,0 chr1 44447094 . G . PASS END=44447106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 44447107 . C . PASS END=44447107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 44447108 . C . PASS END=44447115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 44447116 . C . PASS END=44447116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 44447117 . A . PASS END=44447120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 44447121 . T . PASS END=44447122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,549:0,32,255:14,0 chr1 44447123 . T . PASS END=44447136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:15,0 chr1 44447137 . C . PASS END=44447137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44447138 . T . PASS END=44447138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:12,0 chr1 44447139 . G . PASS END=44447139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 44447140 . G . PASS END=44447141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44447142 . C . PASS END=44447145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 44447361 . T . PASS END=44447385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,519:0,42,255:17,0 chr1 44447386 . C . PASS END=44447386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 44447387 . T . PASS END=44447423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:19,0 chr1 44447424 . C . PASS END=44447424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr1 44447425 . A . PASS END=44447427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44447428 . C . PASS END=44447442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 44447443 . C . PASS END=44447443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:16,0 chr1 44447444 . C . PASS END=44447459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:19,0 chr1 44447460 . A . PASS END=44447492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:24,0 chr1 44447493 . T . PASS END=44447495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 44447496 . C . PASS END=44447498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 44447499 . T . PASS END=44447499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 44447500 . T . PASS END=44447503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 44447504 . C . PASS END=44447504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 44447505 . A . PASS END=44447523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,795:0,69,255:26,0 chr1 44447524 . C . PASS END=44447534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 44447535 . A . PASS END=44447537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 44447538 . A . PASS END=44447554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 44447555 . A . PASS END=44447565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 44447566 . G . PASS END=44447574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 44447575 . C . PASS END=44447591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,994:0,68,255:26,0 chr1 44447592 . A . PASS END=44447592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,791:0,58,255:23,0 chr1 44447593 . C . PASS END=44447594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 44447595 . A . PASS END=44447596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 44450537 . C . PASS END=44450673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1119:0,84,255:40,0 chr1 44450674 . C . PASS END=44450674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:33,0 chr1 44450675 . T . PASS END=44450678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1371:0,95,255:35,0 chr1 44450679 . G . PASS END=44450679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:30,0 chr1 44450680 . C . PASS END=44450695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:31,0 chr1 44450696 . T . PASS END=44450696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,900:0,79,255:29,0 chr1 44450697 . T . PASS END=44450723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr1 44450724 . T . PASS END=44450727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 44450950 . G . PASS END=44450950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 44450951 . C . PASS END=44450952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 44450953 . T . PASS END=44450953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 44450954 . C . PASS END=44450957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 44450958 . A . PASS END=44450958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 44450959 . T . PASS END=44450967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1127:0,80,255:32,0 chr1 44450968 . C . PASS END=44450968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 44450969 . T . PASS END=44450969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 44450970 . T . PASS END=44450970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1082:0,68,255:31,0 chr1 44450971 . T . PASS END=44450986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1101:0,82,255:33,0 chr1 44450987 . C . PASS END=44450988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1121:0,63,255:32,0 chr1 44450989 . G . PASS END=44451001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1311:0,95,255:35,0 chr1 44451002 . T . PASS END=44451002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:34,0 chr1 44451003 . T . PASS END=44451017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1321:0,95,255:37,0 chr1 44451018 . G . PASS END=44451018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:36,0 chr1 44451019 . C . PASS END=44451032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1250:0,91,255:36,0 chr1 44451033 . A . PASS END=44451033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:31,0 chr1 44451034 . C . PASS END=44451034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1280:0,94,255:32,0 chr1 44451035 . T . PASS END=44451035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1202:0,61,255:31,0 chr1 44451036 . G . PASS END=44451039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:34,0 chr1 44451040 . C . PASS END=44451040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:27:35:0,27,1074:0,27,255:32,0 chr1 44451041 . T . PASS END=44451041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:31,0 chr1 44451042 . G . PASS END=44451045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 44451046 . T . PASS END=44451046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:8:34:0,8,1078:0,8,255:29,0 chr1 44451047 . G . PASS END=44451049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:31,0 chr1 44451050 . G . PASS END=44451050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 44451051 . A . PASS END=44451051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1060:0,30,255:29,0 chr1 44451052 . G . PASS END=44451052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1241:0,86,255:31,0 chr1 44451053 . G . PASS END=44451053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1119:0,69,255:30,0 chr1 44451054 . A . PASS END=44451054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:29:33:0,29,1049:0,29,255:30,0 chr1 44451055 . T . PASS END=44451055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 44451056 . G . PASS END=44451056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:30,0 chr1 44451057 . A . PASS END=44451057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1052:0,41,255:30,0 chr1 44451058 . T . PASS END=44451058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:31,0 chr1 44451059 . G . PASS END=44451060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1041:0,41,255:29,0 chr1 44451061 . C . PASS END=44451061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:29,0 chr1 44451062 . A . PASS END=44451062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:16:32:0,16,997:0,16,255:27,0 chr1 44451063 . T . PASS END=44451063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:51:33:0,51,959:0,51,255:28,0 chr1 44451064 . C . PASS END=44451064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 44451065 . T . PASS END=44451067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,1116:0,66,255:29,0 chr1 44451068 . A . PASS END=44451068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:29,0 chr1 44451069 . A . PASS END=44451069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,973:0,68,255:28,0 chr1 44451070 . C . PASS END=44451070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 44451071 . C . PASS END=44451071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:28,0 chr1 44451072 . G . PASS END=44451072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1149:0,82,255:28,0 chr1 44451189 . G . PASS END=44451189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 44451190 . A . PASS END=44451190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 44451191 . T . PASS END=44451264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:86:35:0,86,1329:0,86,255:40,0 chr1 44451265 . G . PASS END=44451265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:30,0 chr1 44451266 . A . PASS END=44451278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1216:0,83,255:31,0 chr1 44451279 . A . PASS END=44451279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,881:0,59,255:27,0 chr1 44451280 . C . PASS END=44451281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 44451282 . T . PASS END=44451282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 44451283 . A . PASS END=44451289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 44451290 . A . PASS END=44451293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 44455970 . G . PASS END=44456120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:38:0,89,1395:0,89,255:40,0 chr1 44457281 . C . PASS END=44457282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 44457283 . A . PASS END=44457284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 44457285 . G . PASS END=44457287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 44457288 . C . PASS END=44457288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 44457289 . C . PASS END=44457289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 44457290 . T . PASS END=44457290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 44457291 . G . PASS END=44457304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:18,0 chr1 44457305 . G A, 101.17 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,6,0:0,12,0:51:139,54,0,682,54,682:255,54,0:0,0:1.0117e+02,5.1169e+01,3.3134e-05,4.5000e+02,8.5939e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,4:0,0,8,10 chr1 44457306 . G . PASS END=44457326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,670:0,41,255:19,0 chr1 44457327 . G . PASS END=44457329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44457330 . T . PASS END=44457342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 44457343 . G . PASS END=44457348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:22,0 chr1 44457349 . A . PASS END=44457349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 44457350 . A . PASS END=44457351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,719:0,66,255:22,0 chr1 44457352 . A . PASS END=44457352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr1 44457353 . G . PASS END=44457357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 44457358 . C . PASS END=44457358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 44457359 . C . PASS END=44457369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:68:23:0,68,705:0,68,255:24,0 chr1 44457370 . A . PASS END=44457370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 44457371 . G . PASS END=44457382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 44457383 . G . PASS END=44457394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 44457395 . G . PASS END=44457395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,823:0,31,255:24,0 chr1 44457396 . A . PASS END=44457423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:25:0,67,925:0,67,255:26,0 chr1 44457424 . G . PASS END=44457424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:25,0 chr1 44457425 . C . PASS END=44457447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,67,255:26,0 chr1 44457448 . G . PASS END=44457448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:21,0 chr1 44457449 . A . PASS END=44457465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 44457466 . A . PASS END=44457476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 44457477 . C . PASS END=44457483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 44457484 . G . PASS END=44457484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 44457485 . C . PASS END=44457487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44457488 . T . PASS END=44457490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 44457491 . C . PASS END=44457502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 44457503 . G . PASS END=44457503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 44457504 . A . PASS END=44457509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 44457510 . G . PASS END=44457539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,623:0,41,255:19,0 chr1 44457540 . G . PASS END=44457556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:22:0,61,808:0,61,255:26,0 chr1 44457557 . C . PASS END=44457558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:23,0 chr1 44457559 . G . PASS END=44457596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:26,0 chr1 44457597 . T . PASS END=44457597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:22,0 chr1 44457598 . T . PASS END=44457600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 44457601 . G . PASS END=44457601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr1 44457602 . C . PASS END=44457604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 44457605 . C . PASS END=44457605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 44457606 . G . PASS END=44457621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,799:0,62,255:26,0 chr1 44457622 . G . PASS END=44457623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44457624 . A . PASS END=44457630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 44457631 . T . PASS END=44457631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:22,0 chr1 44457632 . C . PASS END=44457648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 44457649 . G . PASS END=44457678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1097:0,80,255:32,0 chr1 44457679 . G . PASS END=44457682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:26,0 chr1 44457683 . A . PASS END=44457696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:45:29:0,45,675:0,77,255:19,0 chr1 44457697 . C . PASS END=44457698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:29:0,45,675:0,87,255:15,0 chr1 44457699 . A . PASS END=44457710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:30:28:0,30,450:0,80,255:12,0 chr1 44457711 . T . PASS END=44457720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:24:27:0,24,360:0,42,255:9,0 chr1 44457721 . C . PASS END=44457725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:15:28:0,15,225:0,68,255:6,0 chr1 44457825 . C . PASS END=44457829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 44457830 . A . PASS END=44457830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:19,0 chr1 44457831 . C . PASS END=44457834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 44457835 . T . PASS END=44457835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:19,0 chr1 44457836 . C . PASS END=44457843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 44457844 . T . PASS END=44457845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,798:0,50,255:22,0 chr1 44457846 . C . PASS END=44457847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 44457848 . C . PASS END=44457848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:20,0 chr1 44457849 . T . PASS END=44457849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr1 44457850 . C . PASS END=44457854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 44457855 . G . PASS END=44457860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,776:0,52,255:19,0 chr1 44457861 . A . PASS END=44457861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44457862 . G . PASS END=44457862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 44457863 . G . PASS END=44457877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 44457878 . T . PASS END=44457878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 44457879 . T . PASS END=44457900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr1 44457901 . A . PASS END=44457903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 44457904 . G . PASS END=44457914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 44457915 . C . PASS END=44457915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 44457916 . T . PASS END=44457918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 44457919 . A . PASS END=44457922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:20,0 chr1 44457923 . T . PASS END=44457931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 44457932 . C . PASS END=44457948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,693:0,47,255:19,0 chr1 44457949 . C . PASS END=44457952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44457953 . G . PASS END=44457976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:18,0 chr1 44457977 . C . PASS END=44457977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 44457978 . C . PASS END=44457993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 44457994 . C . PASS END=44457994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 44457995 . C . PASS END=44457997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:16,0 chr1 44457998 . T . PASS END=44457998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 44457999 . T . PASS END=44458000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 44458001 . C . PASS END=44458001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr1 44458002 . G . PASS END=44458005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 44458006 . G . PASS END=44458006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 44458007 . G . PASS END=44458015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:17,0 chr1 44458016 . C . PASS END=44458016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 44458017 . A . PASS END=44458018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 44458019 . T . PASS END=44458019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 44458020 . T . PASS END=44458031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:17,0 chr1 44458032 . T . PASS END=44458032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 44458033 . C . PASS END=44458033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 44458034 . C . PASS END=44458034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 44458035 . G . PASS END=44458098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,609:0,41,255:19,0 chr1 44458099 . G . PASS END=44458108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:24,0 chr1 44458109 . G . PASS END=44458109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 44458110 . C . PASS END=44458156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:24,0 chr1 44458157 . A . PASS END=44458157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 44458158 . G . PASS END=44458161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 44458162 . C . PASS END=44458163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,770:0,52,255:21,0 chr1 44458164 . T . PASS END=44458164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,754:0,38,255:21,0 chr1 44458165 . C . PASS END=44458165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44458166 . T . PASS END=44458166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr1 44458167 . C . PASS END=44458169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 44458170 . C . PASS END=44458173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,747:0,52,255:19,0 chr1 44458174 . C . PASS END=44458174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 44458175 . T . PASS END=44458178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:19,0 chr1 44458179 . T . PASS END=44458183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44458184 . A . PASS END=44458185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44458186 . C . PASS END=44458186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44458187 . T . PASS END=44458187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 44458188 . T . PASS END=44458194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44458195 . G . PASS END=44458195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 44458196 . G . PASS END=44458200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 44458201 . G . PASS END=44458201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 44458202 . G . PASS END=44458211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 44458212 . G . PASS END=44458213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 44458214 . G . PASS END=44458214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:20,0 chr1 44458215 . T . PASS END=44458215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 44458216 . C . PASS END=44458221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,73,255:23,0 chr1 44458222 . T . PASS END=44458222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:22,0 chr1 44458223 . A . PASS END=44458224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:28:0,69,1035:0,74,255:24,0 chr1 44458225 . C . PASS END=44458232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 44458233 . T . PASS END=44458233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:27,0 chr1 44458234 . C . PASS END=44458240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 44458241 . T . PASS END=44458241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,887:0,70,255:27,0 chr1 44458242 . T . PASS END=44458242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:26,0 chr1 44458243 . T . PASS END=44458258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr1 44458259 . A . PASS END=44458259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr1 44458260 . G . PASS END=44458267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44458268 . T . PASS END=44458268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 44458269 . T . PASS END=44458269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44458270 . G . PASS END=44458270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 44458271 . C . PASS END=44458273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 44458274 . G . PASS END=44458274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 44458275 . A . PASS END=44458275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 44458276 . A . PASS END=44458276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 44458277 . C . PASS END=44458277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 44458278 . A . PASS END=44458278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 44458279 . G . PASS END=44458290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 44458291 . G . PASS END=44458291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 44458292 . A . PASS END=44458292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,944:0,84,255:28,0 chr1 44458293 . T . PASS END=44458293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:27,0 chr1 44458294 . G . PASS END=44458299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 44458300 . T . PASS END=44458300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 44458301 . G . PASS END=44458303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44458304 . G . PASS END=44458304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 44458305 . G . PASS END=44458305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 44458306 . G . PASS END=44458309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,992:0,68,255:26,0 chr1 44458310 . A . PASS END=44458310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,894:0,50,255:25,0 chr1 44458311 . G . PASS END=44458311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44459471 . A . PASS END=44459509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,104,1570:0,104,255:40,0 chr1 44459559 . C . PASS END=44459620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:94:34:0,94,1288:0,94,255:40,0 chr1 44459621 . T . PASS END=44459621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:28,0 chr1 44459622 . G . PASS END=44459636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1233:0,86,255:30,0 chr1 44460780 . G . PASS END=44460834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1221:0,89,255:37,0 chr1 44461273 . C . PASS END=44461273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 44461274 . G . PASS END=44461324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,917:0,72,255:26,0 chr1 44461325 . T . PASS END=44461326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 44461327 . G . PASS END=44461335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 44461336 . C . PASS END=44461341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 44461342 . G . PASS END=44461342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 44461450 . A . PASS END=44461454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1398:0,114,255:38,0 chr1 44461455 . A . PASS END=44461455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1202:0,59,255:36,0 chr1 44461456 . A . PASS END=44461528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1333:0,84,255:40,0 chr1 44461610 . G . PASS END=44461624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:18:0,50,692:0,50,255:19,0 chr1 44461625 . G . PASS END=44461625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44461626 . T . PASS END=44461626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 44461627 . C . PASS END=44461638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,923:0,72,255:26,0 chr1 44461639 . G . PASS END=44461674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1008:0,81,255:35,0 chr1 44461675 . C . PASS END=44461675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr1 44461676 . T . PASS END=44461682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,99,1485:0,105,255:38,0 chr1 44461683 . T . PASS END=44461683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:37,0 chr1 44461684 . G . PASS END=44461768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1233:0,86,255:37,0 chr1 44461769 . C . PASS END=44461770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:25,0 chr1 44461771 . G . PASS END=44461771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 44461772 . C . PASS END=44461774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 44461775 . C . PASS END=44461775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 44461776 . A . PASS END=44461776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 44461777 . G . PASS END=44461793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:29,0 chr1 44461794 . A . PASS END=44461800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 44461801 . T . PASS END=44461801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44461802 . G . PASS END=44461802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 44461803 . T . PASS END=44461803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 44461804 . C . PASS END=44461825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,68,255:25,0 chr1 44461826 . A . PASS END=44461849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 44461850 . A . PASS END=44461851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 44463217 . T . PASS END=44463236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:11,0 chr1 44463237 . G . PASS END=44463250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 44463251 . T . PASS END=44463254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 44463255 . T . PASS END=44463260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 44463261 . C . PASS END=44463265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 44463266 . G . PASS END=44463266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:14,0 chr1 44463267 . G . PASS END=44463278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,615:0,48,255:18,0 chr1 44463279 . T . PASS END=44463279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 44463280 . G . PASS END=44463328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr1 44463329 . A . PASS END=44463329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 44463330 . T . PASS END=44463337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 44463338 . G . PASS END=44463347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:16:0,35,540:0,35,255:13,0 chr1 44463348 . C . PASS END=44463375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 44463376 . C . PASS END=44463376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 44463377 . C . PASS END=44463383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 44463384 . T . PASS END=44463384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 44463385 . G . PASS END=44463394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 44463395 . G . PASS END=44463395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 44463396 . T . PASS END=44463411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 44463527 . C . PASS END=44463530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr1 44463531 . A . PASS END=44463538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 44463539 . G . PASS END=44463539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 44463540 . T . PASS END=44463557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,886:0,72,255:26,0 chr1 44463558 . A . PASS END=44463642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1064:0,80,255:36,0 chr1 44463643 . G . PASS END=44463670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 44463671 . C . PASS END=44463697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 44463796 . C . PASS END=44463817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,770:0,63,255:26,0 chr1 44463818 . G . PASS END=44463822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 44463823 . G . PASS END=44463823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 44463824 . G . PASS END=44463826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 44463827 . C . PASS END=44463827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 44463828 . A . PASS END=44463828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 44463829 . G . PASS END=44463831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 44463832 . G . PASS END=44463833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44463834 . C . PASS END=44463836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44463837 . C . PASS END=44463844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 44463845 . C . PASS END=44463871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,946:0,67,255:26,0 chr1 44463872 . G . PASS END=44463873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 44463874 . C . PASS END=44463882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 44463883 . G . PASS END=44463897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 44466439 . G . PASS END=44466456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,349:0,30,255:13,0 chr1 44466457 . G . PASS END=44466482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 44466483 . A . PASS END=44466485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44466486 . G . PASS END=44466515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 44466516 . T . PASS END=44466516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 44466517 . G . PASS END=44466520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 44466521 . T . PASS END=44466521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:12,0 chr1 44466522 . G . PASS END=44466522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 44466523 . G . PASS END=44466528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,557:0,32,255:13,0 chr1 44466529 . G . PASS END=44466533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 44466534 . G . PASS END=44466541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44466542 . G . PASS END=44466542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 44466543 . G . PASS END=44466543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 44466544 . A . PASS END=44466544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44466545 . G . PASS END=44466553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 44466554 . G . PASS END=44466554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 44466555 . G . PASS END=44466565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 44466566 . C . PASS END=44466566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 44466567 . G . PASS END=44466572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 44466573 . C . PASS END=44466577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44466578 . T . PASS END=44466578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:11,0 chr1 44466579 . G . PASS END=44466584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,496:0,39,255:13,0 chr1 44466585 . G . PASS END=44466587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 44466588 . A . PASS END=44466588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 44466589 . A . PASS END=44466597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 44466598 . T . PASS END=44466601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44466602 . G . PASS END=44466603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 44466604 . G . PASS END=44466604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44466605 . A . PASS END=44466605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 44466606 . G . PASS END=44466607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44466608 . C . PASS END=44466642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:18,0 chr1 44466643 . T . PASS END=44466643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 44466644 . G . PASS END=44466687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:18,0 chr1 44466688 . C . PASS END=44466708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 44466709 . G . PASS END=44466709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 44466710 . C . PASS END=44466715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 44466716 . A . PASS END=44466716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 44466717 . T . PASS END=44466718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 44466719 . G . PASS END=44466723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 44466724 . C . PASS END=44466727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 44466836 . C . PASS END=44466846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 44466847 . G . PASS END=44466970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1094:0,83,255:37,0 chr1 44467062 . C . PASS END=44467062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 44467063 . T . PASS END=44467067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 44467068 . G . PASS END=44467068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 44467069 . C . PASS END=44467069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44467070 . C . PASS END=44467072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 44467073 . G . PASS END=44467075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 44467076 . C . PASS END=44467081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44467082 . G . PASS END=44467084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44467085 . T . PASS END=44467087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 44467088 . G . PASS END=44467089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44467090 . A . PASS END=44467090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 44467091 . T . PASS END=44467095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44467096 . A . PASS END=44467109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 44467110 . C . PASS END=44467120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 44467121 . A . PASS END=44467131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 44467132 . A . PASS END=44467133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 44467134 . T . PASS END=44467134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:21,0 chr1 44467135 . G . PASS END=44467164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,825:0,69,255:24,0 chr1 44467165 . A . PASS END=44467165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 44467166 . G . PASS END=44467170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 44467171 . G . PASS END=44467181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:28,0 chr1 44467182 . T . PASS END=44467182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 44467183 . G . PASS END=44467221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:31,0 chr1 44467222 . A . PASS END=44467222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:26,0 chr1 44467223 . A . PASS END=44467230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 44467231 . A . PASS END=44467231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:28,0 chr1 44467232 . T . PASS END=44467240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1156:0,92,255:31,0 chr1 44467241 . T . PASS END=44467241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr1 44467242 . G . PASS END=44467251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1060:0,93,255:31,0 chr1 44467252 . G . PASS END=44467252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 44467253 . C . PASS END=44467270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 44467271 . A . PASS END=44467272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 44467273 . T . PASS END=44467273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,832:0,51,255:23,0 chr1 44467274 . T . PASS END=44467281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:25,0 chr1 44467282 . C . PASS END=44467283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 44467284 . G . PASS END=44467290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44467291 . A . PASS END=44467291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:25,0 chr1 44467292 . C . PASS END=44467293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 44467294 . C . PASS END=44467299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:51:26:0,51,765:0,68,255:19,0 chr1 44467985 . C . PASS END=44467994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,607:0,48,255:18,0 chr1 44467995 . T . PASS END=44467995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,568:0,23,255:17,0 chr1 44467996 . A . PASS END=44468004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 44468005 . C . PASS END=44468026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:22,0 chr1 44468027 . A . PASS END=44468027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 44468028 . T . PASS END=44468033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 44468034 . C . PASS END=44468042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 44468043 . C . PASS END=44468043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:17,0 chr1 44468044 . G . PASS END=44468049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:17,0 chr1 44468050 . C . PASS END=44468054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 44468055 . A . PASS END=44468057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,629:0,40,255:14,0 chr1 44468058 . A . PASS END=44468071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,37,255:13,0 chr1 44468072 . G . PASS END=44468072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 44468073 . C . PASS END=44468080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 44468081 . C . PASS END=44468085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 44468086 . C . PASS END=44468088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 44468184 . C . PASS END=44468214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,709:0,63,255:25,0 chr1 44468215 . G . PASS END=44468271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1064:0,86,255:34,0 chr1 44468272 . A . PASS END=44468272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:27,0 chr1 44468273 . G . PASS END=44468276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 44468277 . G . PASS END=44468277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr1 44468278 . G . PASS END=44468279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 44468280 . C . PASS END=44468296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:25:0,70,917:0,70,255:26,0 chr1 44468297 . A . PASS END=44468297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 44468298 . C . PASS END=44468307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 44468308 . A . PASS END=44468308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 44468309 . A . PASS END=44468310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 44468311 . T . PASS END=44468311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 44468312 . A . PASS END=44468314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 44468315 . C . PASS END=44468318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44468525 . T . PASS END=44468653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:36:0,86,1197:0,86,255:40,0 chr1 44468654 . C . PASS END=44468656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 44468657 . C . PASS END=44468657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 44474025 . C . PASS END=44474031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr1 44474032 . A . PASS END=44474032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 44474033 . C . PASS END=44474046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,690:0,44,255:19,0 chr1 44474047 . T . PASS END=44474054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 44474055 . T . PASS END=44474055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 44474056 . G . PASS END=44474073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:24,0 chr1 44474074 . G . PASS END=44474079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:28,0 chr1 44474080 . A . PASS END=44474080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 44474081 . G . PASS END=44474256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,934:0,84,255:40,0 chr1 44474257 . C . PASS END=44474257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr1 44474258 . G . PASS END=44474267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,102,1530:0,108,255:35,0 chr1 44474268 . G . PASS END=44474268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 44474269 . A . PASS END=44474277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:32,0 chr1 44474278 . T . PASS END=44474295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:26,0 chr1 44475637 . C . PASS END=44475687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:31:0,90,1127:0,93,255:40,0 chr1 44475688 . A . PASS END=44475688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:75:42:0,75,1036:0,75,255:38,0 chr1 44475689 . C . PASS END=44475725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:38:0,92,1283:0,92,255:40,0 chr1 44475726 . C . PASS END=44475726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:36,0 chr1 44475727 . C . PASS END=44475738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1300:0,101,255:38,0 chr1 44475739 . G . PASS END=44475739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1219:0,59,255:33,0 chr1 44475740 . C . PASS END=44475743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1323:0,81,255:34,0 chr1 44475744 . A . PASS END=44475744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:33,0 chr1 44475745 . T . PASS END=44475754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1213:0,91,255:35,0 chr1 44475755 . G . PASS END=44475755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:30,0 chr1 44475756 . A . PASS END=44475765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,85,255:32,0 chr1 44475766 . C . PASS END=44475768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,86,255:26,0 chr1 44476398 . C . PASS END=44476408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:23,0 chr1 44476409 . C . PASS END=44476409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 44476410 . G . PASS END=44476440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,817:0,64,255:26,0 chr1 44476441 . G . PASS END=44476445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 44476446 . G . PASS END=44476446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 44476447 . G . PASS END=44476473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1094:0,87,255:32,0 chr1 44476474 . T . PASS END=44476474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 44476475 . A . PASS END=44476506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1149:0,83,255:31,0 chr1 44476507 . T . PASS END=44476507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,869:0,76,255:28,0 chr1 44476508 . T . PASS END=44476510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 44476511 . A . PASS END=44476523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,969:0,65,255:26,0 chr1 44476524 . T . PASS END=44476524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:22,0 chr1 44476525 . C . PASS END=44476543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,984:0,65,255:24,0 chr1 44476544 . A . PASS END=44476554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,50,255:18,0 chr1 44477233 . C . PASS END=44477242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:24,0 chr1 44477243 . G . PASS END=44477276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1039:0,80,255:37,0 chr1 44477277 . G . PASS END=44477277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:35,0 chr1 44477278 . A . PASS END=44477355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1072:0,87,255:38,0 chr1 44477356 . T . PASS END=44477356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 44477357 . G . PASS END=44477361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 44477362 . G . PASS END=44477370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,984:0,70,255:26,0 chr1 44477371 . T . PASS END=44477371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:22,0 chr1 44477372 . C . PASS END=44477374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:23,0 chr1 44477375 . T . PASS END=44477394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:19,0 chr1 44482719 . C . PASS END=44482723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,984:0,65,255:26,0 chr1 44482724 . C . PASS END=44482738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr1 44482739 . C . PASS END=44482739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 44482740 . C . PASS END=44482756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1119:0,90,255:30,0 chr1 44482757 . C . PASS END=44482757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 44482758 . G . PASS END=44482759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 44482760 . C . PASS END=44482761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 44482762 . A . PASS END=44482773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1072:0,87,255:29,0 chr1 44482774 . G . PASS END=44482803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,770:0,66,255:24,0 chr1 44482804 . A . PASS END=44482804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 44482805 . T . PASS END=44482807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 44482808 . A . PASS END=44482825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:18:0,41,665:0,41,255:18,0 chr1 44482826 . G . PASS END=44482826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 44482827 . C . PASS END=44482827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 44482828 . G . PASS END=44482834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:12,0 chr1 44482835 . T . PASS END=44482835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:10,0 chr1 44482836 . G . PASS END=44482837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 44489920 . C . PASS END=44489949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,100,1690:0,100,255:40,0 chr1 44584499 . A . PASS END=44584509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,946:0,78,255:26,0 chr1 44584510 . C . PASS END=44584616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1111:0,83,255:40,0 chr1 44584617 . C . PASS END=44584617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:28,0 chr1 44584618 . T . PASS END=44584622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:29,0 chr1 44584623 . A . PASS END=44584623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 44584624 . G . PASS END=44584626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 44584627 . G . PASS END=44584627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 44584628 . A . PASS END=44584631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 44584632 . G . PASS END=44584632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 44584633 . G . PASS END=44584637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 44584638 . A . PASS END=44584654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,71,255:25,0 chr1 44584655 . G . PASS END=44584655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 44584656 . C . PASS END=44584656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 44584657 . C . PASS END=44584660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 44595025 . G . PASS END=44595040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:26,0 chr1 44595041 . C . PASS END=44595042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 44595043 . C . PASS END=44595046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44595047 . T A, 127.33 PASS DP=28;MQ=245.92;FractionInformativeReads=0.964 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,14,0:0,13,0:77:165,80,0,956,80,956:255,84,0:0,0:1.2733e+02,7.7329e+01,0.0000e+00,4.5000e+02,1.1210e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,13:0,0,15,12 chr1 44595048 . C . PASS END=44595050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44595051 . G . PASS END=44595051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 44595052 . A . PASS END=44595055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 44595056 . T . PASS END=44595056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 44595057 . G . PASS END=44595059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 44595060 . T . PASS END=44595060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 44595061 . T . PASS END=44595068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr1 44595069 . T . PASS END=44595069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 44595070 . G . PASS END=44595071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 44595072 . A . PASS END=44595072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 44595073 . A . PASS END=44595093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1158:0,93,255:35,0 chr1 44595094 . T . PASS END=44595094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:34,0 chr1 44595095 . G . PASS END=44595112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1213:0,88,255:35,0 chr1 44595113 . G C, 148.41 PASS DP=34;MQ=246.65;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,16,0:0,18,0:98:186,101,0,1260,101,1260:255,102,0:0,0:1.4841e+02,9.8411e+01,0.0000e+00,4.5000e+02,1.3318e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,18:0,0,22,12 chr1 44595114 . C . PASS END=44595119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:30,0 chr1 44595120 . G . PASS END=44595122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 44595123 . C . PASS END=44595131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 44595132 . C . PASS END=44595150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,978:0,71,255:26,0 chr1 44595151 . T . PASS END=44595151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 44595152 . C . PASS END=44595155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 44595156 . T . PASS END=44595156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr1 44595157 . T . PASS END=44595163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 44595164 . C . PASS END=44595202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 44595203 . C . PASS END=44595226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr1 44595227 . A . PASS END=44595228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44595229 . C . PASS END=44595256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:18:0,41,593:0,41,255:19,0 chr1 44595257 . C . PASS END=44595259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 44595260 . T . PASS END=44595316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,637:0,54,255:19,0 chr1 44595317 . C . PASS END=44595317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 44595318 . G . PASS END=44595336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 44595337 . C . PASS END=44595338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 44595339 . A . PASS END=44595343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 44595344 . C . PASS END=44595362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 44595363 . T . PASS END=44595400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,721:0,50,255:19,0 chr1 44595401 . T . PASS END=44595411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:22,0 chr1 44595412 . G . PASS END=44595412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 44595413 . G . PASS END=44595447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,808:0,66,255:25,0 chr1 44595448 . A . PASS END=44595448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44595449 . T . PASS END=44595449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:18,0 chr1 44595450 . G . PASS END=44595494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,792:0,62,255:26,0 chr1 44595495 . A . PASS END=44595495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 44595496 . G . PASS END=44595514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 44595515 . T . PASS END=44595515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 44595516 . G . PASS END=44595574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 44595575 . T . PASS END=44595575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 44595576 . G . PASS END=44595598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:26,0 chr1 44595599 . A . PASS END=44595606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 44595607 . A . PASS END=44595635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,945:0,62,255:26,0 chr1 44595636 . G . PASS END=44595652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 44595653 . A . PASS END=44595653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 44595654 . C . PASS END=44595662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 44595663 . C . PASS END=44595674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1053:0,71,255:26,0 chr1 44595675 . C . PASS END=44595676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 44595677 . C . PASS END=44595677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 44595678 . T . PASS END=44595682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1045:0,84,255:28,0 chr1 44595683 . A . PASS END=44595684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 44595685 . G . PASS END=44595701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1093:0,80,255:30,0 chr1 44595702 . G . PASS END=44595727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 44595728 . T . PASS END=44595736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,940:0,81,255:27,0 chr1 44595737 . A . PASS END=44595752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1045:0,71,255:26,0 chr1 44595753 . A . PASS END=44595755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 44595756 . G . PASS END=44595773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr1 44595774 . C . PASS END=44595774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,892:0,34,255:21,0 chr1 44595775 . T . PASS END=44595781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:24,0 chr1 44595782 . C . PASS END=44595782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 44595783 . A . PASS END=44595787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 44595788 . C . PASS END=44595788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 44595789 . T . PASS END=44595801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:25,0 chr1 44595802 . T . PASS END=44595802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44595803 . A . PASS END=44595807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 44595808 . A . PASS END=44595808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:26,0 chr1 44595809 . A . PASS END=44595810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 44595811 . T . PASS END=44595811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr1 44595812 . G . PASS END=44595816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 44595817 . A . PASS END=44595828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 44595829 . A . PASS END=44595831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,845:0,44,255:24,0 chr1 44595832 . C . PASS END=44595836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 44595837 . C . PASS END=44595837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 44595838 . C . PASS END=44595840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 44595841 . C . PASS END=44595842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:24:0,45,855:0,45,255:21,0 chr1 44595843 . C . PASS END=44595844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 44595845 . T . PASS END=44595845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 44595846 . G . PASS END=44595849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 44595850 . C . PASS END=44595850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 44595851 . A . PASS END=44595852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 44595853 . C . PASS END=44595853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 44595854 . A . PASS END=44595856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 44595857 . G . PASS END=44595857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 44595858 . C . PASS END=44595859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44595860 . A . PASS END=44595868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 44596184 . G . PASS END=44596393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:38:0,93,1291:0,93,255:40,0 chr1 44596394 . G . PASS END=44596409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:65:26:0,65,969:0,65,255:25,0 chr1 44596410 . T . PASS END=44596410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:24,0 chr1 44596411 . C . PASS END=44596412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 44596413 . T . PASS END=44596413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,822:0,28,255:22,0 chr1 44596414 . G . PASS END=44596428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 44603493 . T . PASS END=44603683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:31:0,84,1260:0,93,255:40,0 chr1 44604336 . C . PASS END=44604340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,668:0,46,255:19,0 chr1 44604341 . T . PASS END=44604341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,658:0,36,255:19,0 chr1 44604342 . G . PASS END=44604353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 44604354 . G . PASS END=44604354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 44604355 . G . PASS END=44604371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:23,0 chr1 44604372 . C . PASS END=44604372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 44604373 . C . PASS END=44604376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 44604377 . G . PASS END=44604383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 44604384 . A . PASS END=44604384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 44604385 . C . PASS END=44604385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 44604386 . A . PASS END=44604386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 44604387 . T . PASS END=44604652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1214:0,84,255:40,0 chr1 44604653 . G . PASS END=44604663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1380:0,98,255:36,0 chr1 44604664 . G . PASS END=44604664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:34,0 chr1 44604665 . C . PASS END=44604666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:41:0,85,1504:0,85,255:35,0 chr1 44604667 . T . PASS END=44604667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1373:0,43,255:35,0 chr1 44604668 . C . PASS END=44604669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1604:0,116,255:39,0 chr1 44604670 . A . PASS END=44604670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:46:44:0,46,1465:0,46,255:39,0 chr1 44604671 . T . PASS END=44604676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,108,1620:0,113,255:38,0 chr1 44604677 . G . PASS END=44604677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:38:44:0,38,1480:0,38,255:38,0 chr1 44604678 . C . PASS END=44604678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:16:44:0,16,1435:0,16,255:37,0 chr1 44604679 . C . PASS END=44604685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:93:45:0,93,1395:0,119,255:34,0 chr1 44604686 . T . PASS END=44604686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:30:46:0,30,1484:0,30,255:32,0 chr1 44604687 . C . PASS END=44604692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:46:0,93,1395:0,122,255:33,0 chr1 44604693 . A . PASS END=44604693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:50:48:0,50,1628:0,50,255:27,0 chr1 44604694 . G . PASS END=44604694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1686:0,78,255:28,0 chr1 44604695 . G . LowGQ END=44604696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:0:51:0,0,1280:15,0,255:35,4 chr1 44604697 . C . PASS END=44604718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:87:49:0,87,1305:0,87,255:37,0 chr1 44604719 . T . LowGQ END=44604719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,16:51:0:51:0,0,662:255,0,255:12,0 chr1 44604720 . T TCTGGTTACCAGTGGAGGTCATCATATTCTGCCCCCCGTAGAGGGC, 82.86 PASS DP=50;MQ=146.06;MQRankSum=-2.098;ReadPosRankSum=0.157;FractionInformativeReads=0.660;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:3,30,0:0.909,0.000:33:3,18,0:0,12,0:34:115,37,0,1252,94,1342:255,0,255:11,0:8.2857e+01,3.3707e+01,1.8499e-03,4.5000e+02,1.2553e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:1,2,22,8:1,2,16,14 chr1 44604721 . C . PASS END=44604734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:52:0,84,1260:0,132,255:32,0 chr1 44604735 . A . PASS END=44604735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:78:58:0,78,1170:0,158,255:26,0 chr1 44604736 . G . PASS END=44604742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:84:60:0,84,1260:0,131,255:31,1 chr1 44604743 . A . LowGQ END=44604744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,25:62:0:62:0,0,394:255,0,255:40,31 chr1 44604745 . C . PASS END=44604745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:59:61:0,59,2055:0,59,255:40,0 chr1 44604746 . T . PASS END=44604746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 44604747 . G . PASS END=44604747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:64:63:0,64,2021:0,64,255:40,0 chr1 44604748 . C . PASS END=44604753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,3:67:99:63:0,117,1800:0,117,255:40,0 chr1 44604754 . A . LowGQ END=44604754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,28:70:0:70:0,0,595:255,0,255:40,0 chr1 44604755 . T . PASS END=44604781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,3:71:99:69:0,120,1800:0,124,255:40,0 chr1 44604782 . G . LowGQ END=44604782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,16:79:0:79:0,0,1814:255,0,255:40,0 chr1 44604783 . T . PASS END=44604785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:79:0,120,1800:0,237,255:40,0 chr1 44604786 . C . LowGQ END=44604786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,16:80:0:80:0,0,1875:255,0,255:40,0 chr1 44604787 . C . PASS END=44604790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,4:80:99:79:0,120,1800:0,174,255:40,0 chr1 44604791 . T . LowGQ END=44604791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,12:81:0:81:0,0,2216:155,0,255:40,0 chr1 44604792 . C . PASS END=44604796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:87:0,120,1800:0,170,255:40,0 chr1 44604797 . C . LowGQ END=44604797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,13:89:0:89:0,0,2477:131,0,255:40,0 chr1 44604798 . A . PASS END=44604803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:99:87:0,120,1800:0,190,255:40,0 chr1 44604804 . T . LowGQ END=44604804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,8:86:0:86:0,0,2562:52,0,255:40,0 chr1 44604805 . C . PASS END=44604812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,203,255:40,0 chr1 44604813 . T . PASS END=44604813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,6:89:79:89:0,79,2864:0,79,255:40,0 chr1 44604814 . A . PASS END=44604837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:83:0,120,1800:0,217,255:40,0 chr1 44604838 . A . PASS END=44604999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,205,255:40,0 chr1 44605000 . C . PASS END=44605035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:84:85:0,84,1800:0,84,255:40,0 chr1 44605036 . C . PASS END=44605037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,9:92:2:92:0,2,2823:0,2,255:40,0 chr1 44605038 . T . PASS END=44605042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr1 44605043 . T . LowGQ END=44605043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,12:96:0:96:0,0,2452:117,0,255:40,0 chr1 44605044 . C . PASS END=44605044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,2:97:99:97:0,120,1800:0,237,255:40,0 chr1 44605045 . T . LowGQ END=44605045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,16:99:0:99:0,0,2559:255,0,255:40,0 chr1 44605046 . C . PASS END=44605047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,2:102:99:102:0,120,1800:0,255,255:40,0 chr1 44605048 . A . LowGQ END=44605049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,14:102:0:101:0,0,2770:171,0,255:40,0 chr1 44605050 . A . PASS END=44605054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:93:0,120,1800:0,244,255:40,0 chr1 44605055 . TTCTGGTTACCAGTGGAGGTCATCATCTGCCCCCAGTAGAGGG T, 39.95 PASS DP=106;MQ=39.64;MQRankSum=-2.415;ReadPosRankSum=1.102;FractionInformativeReads=0.858;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:58,33,0:0.363,0.000:91:28,14,0:30,19,0:38:70,0,40,170,170,170:0,255,255:40,0:3.9945e+01,6.7050e-04,4.2751e+01,1.7472e+02,2.0472e+02,1.7773e+02:0.00,30.00,33.01,34.77,64.77,37.78:33,25,16,17:31,27,17,16 chr1 44605056 . T . PASS END=44605078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:87:0,120,1800:0,120,255:40,1 chr1 44605079 . A . LowGQ END=44605080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,19:90:0:90:0,0,1917:255,0,255:40,23 chr1 44605081 . C . PASS END=44605084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:86:0,120,1800:0,223,255:40,0 chr1 44605085 . C . LowGQ END=44605085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,8:89:0:89:0,0,2606:35,0,255:40,0 chr1 44605086 . C . PASS END=44605086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:89:0,120,1800:0,251,255:40,0 chr1 44605087 . C . PASS END=44605087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,7:89:18:89:0,18,2724:0,18,255:40,0 chr1 44605088 . C . PASS END=44605088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:97:0,120,1800:0,255,255:40,0 chr1 44605089 . A . LowGQ END=44605091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:46,51:97:0:97:0,0,0:124,0,255:40,0 chr1 44605092 . A . PASS END=44605096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,2:98:99:97:0,120,1800:0,255,255:40,0 chr1 44605097 . G . LowGQ END=44605098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,38:97:0:97:0,0,701:165,0,255:40,0 chr1 44605099 . C . PASS END=44605117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:97:0,120,1800:0,248,255:40,0 chr1 44605118 . A . LowGQ END=44605118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,14:101:0:101:0,0,2507:202,0,255:40,0 chr1 44605119 . T . PASS END=44605121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:101:0,120,1800:0,254,255:40,0 chr1 44605122 . T . LowGQ END=44605122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,12:102:0:102:0,0,2863:106,0,255:40,0 chr1 44605123 . C . PASS END=44605126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:100:0,120,1800:0,244,255:40,0 chr1 44605127 . C . LowGQ END=44605127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,14:102:0:102:0,0,2652:199,0,255:40,0 chr1 44605128 . C . PASS END=44605132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:101:0,120,1800:0,255,255:40,0 chr1 44605133 . T . LowGQ END=44605133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,15:106:0:106:0,0,2741:181,0,255:40,0 chr1 44605134 . A . PASS END=44605173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,2:97:99:91:0,120,1800:0,172,255:40,0 chr1 44605174 . A . PASS END=44605204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:88:0,120,1800:0,154,255:40,0 chr1 44605205 . G . PASS END=44605205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,8:89:54:89:0,54,2703:0,54,255:40,0 chr1 44605206 . T . PASS END=44605403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,5:81:99:71:0,100,1800:0,100,255:40,0 chr1 44605404 . C . PASS END=44605404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,7:84:25:84:0,25,2577:0,25,255:40,0 chr1 44605405 . A . PASS END=44605475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:82:78:0,82,1800:0,82,255:40,0 chr1 44605476 . C . PASS END=44605512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:74:0,120,1800:0,169,255:40,0 chr1 44605513 . A . LowGQ END=44605513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,11:77:0:77:0,0,1836:85,0,255:40,0 chr1 44605514 . A . PASS END=44605550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:75:0,120,1800:0,135,255:40,0 chr1 44605551 . C . PASS END=44605625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:71:0,117,1800:0,117,255:40,0 chr1 44605626 . C . PASS END=44605626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,7:72:64:72:0,64,2291:0,64,255:40,0 chr1 44605627 . C . PASS END=44605658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:65:0,120,1800:0,145,255:40,0 chr1 44605659 . G . PASS END=44605659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,6:65:37:65:0,37,1994:0,37,255:40,0 chr1 44605660 . G . PASS END=44605663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,116,1800:0,116,255:40,0 chr1 44605664 . G A, 225.79 PASS DP=65;MQ=43.29;FractionInformativeReads=0.969 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,31,0:0,32,0:183:264,186,0,2175,186,2175:255,212,0:0,0:2.2579e+02,1.8291e+02,0.0000e+00,4.5000e+02,2.1768e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,29:0,0,38,25 chr1 44605665 . T . PASS END=44605701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:70:0,120,1800:0,121,255:40,0 chr1 44605702 . G . PASS END=44605760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:79:0,120,1800:0,124,255:40,0 chr1 44605761 . C . PASS END=44605797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:81:0,120,1800:0,176,255:40,0 chr1 44605798 . C T, 38.89 PASS DP=84;MQ=43.27;MQRankSum=-0.073;ReadPosRankSum=3.572;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:51,33,0:0.393,0.000:84:27,20,0:24,13,0:38:74,0,45,1094,1701,2794:255,0,255:40,0:3.8888e+01,6.3814e-04,4.7501e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,21,14,19:24,27,15,18 chr1 44605799 . C . PASS END=44605835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:85:0,120,1800:0,152,255:40,0 chr1 44605836 . T . PASS END=44605951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,4:88:99:59:0,120,1800:0,151,255:40,0 chr1 44605952 . G . PASS END=44605976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,99,1485:0,126,255:40,0 chr1 44605977 . G . PASS END=44605977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1404:0,76,255:31,0 chr1 44605978 . G . PASS END=44605980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:33,0 chr1 44605981 . C . PASS END=44605983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 44605984 . G . PASS END=44605984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,98,255:26,0 chr1 44605985 . T . PASS END=44605985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:26,0 chr1 44605986 . T . PASS END=44605986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,95,255:26,0 chr1 44605987 . A . PASS END=44605988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:26,0 chr1 44605989 . C . LowGQ END=44605989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:0:38:0,0,1070:35,0,255:21,0 chr1 44605990 . A . PASS END=44605990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 44605991 . G . PASS END=44605992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,89,255:27,0 chr1 44605993 . G . PASS END=44605995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,102,255:26,0 chr1 44605996 . G . PASS END=44605996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:57:34:0,57,855:0,86,255:18,0 chr1 44605997 . G . PASS END=44605997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:22,0 chr1 44605998 . T . PASS END=44605999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:48:34:0,48,720:0,102,255:16,0 chr1 44606000 . G . LowGQ END=44606000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,26:34:0:34:0,0,0:255,0,164:8,0 chr1 44606001 . T . PASS END=44606002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:48:33:0,48,720:0,63,255:16,0 chr1 44606003 . A . LowGQ END=44606003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,8:33:0:33:0,0,665:144,0,255:8,0 chr1 44606004 . T . PASS END=44606008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,630:0,65,255:15,0 chr1 44606009 . C . LowGQ END=44606009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,11:30:0:30:0,0,460:187,0,255:6,0 chr1 44606010 . C . PASS END=44606010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,810:0,77,255:18,0 chr1 44606011 . T . LowGQ END=44606011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:12,19:31:0:31:0,0,0:255,0,255:12,0 chr1 44606012 . C . PASS END=44606012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,945:0,76,255:21,0 chr1 44606013 . C . LowGQ END=44606016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:14,18:32:0:27:0,0,0:5,0,255:20,0 chr1 44606017 . G . PASS END=44606017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:20,0 chr1 44606018 . A . PASS END=44606018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,807:0,23,255:19,0 chr1 44606019 . G . PASS END=44606021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:22,0 chr1 44606022 . C . LowGQ END=44606023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,26:27:0:26:0,0,0:255,64,0:1,0 chr1 44606024 . T . PASS END=44606028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:23,0 chr1 44606029 . A . PASS END=44606029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,899:0,54,255:22,0 chr1 44606030 . C . PASS END=44606030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 44606031 . C . LowGQ END=44606031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,19:27:0:27:0,0,0:255,0,221:4,0 chr1 44606032 . A . PASS END=44606038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:24,0 chr1 44606039 . G . PASS END=44606039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,867:0,31,255:23,0 chr1 44606040 . T . PASS END=44606040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:23,0 chr1 44606041 . C . PASS END=44606041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,774:0,28,255:21,0 chr1 44606042 . A . PASS END=44606042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 44606043 . T . PASS END=44606043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 44606044 . C . PASS END=44606044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 44606045 . A . PASS END=44606045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:23,0 chr1 44606046 . C . PASS END=44606046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,803:0,36,255:24,0 chr1 44606047 . T . PASS END=44606047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:6:24:0,6,635:0,6,255:20,0 chr1 44606048 . T . PASS END=44606048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:24,0 chr1 44606049 . G . PASS END=44606049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 44606050 . C . PASS END=44606050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 44606051 . T . PASS END=44606051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,843:0,20,255:25,0 chr1 44606052 . C . PASS END=44606052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 44606053 . T . PASS END=44606053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:27,0 chr1 44606054 . C . PASS END=44606054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 44606055 . C . PASS END=44606055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:30,0 chr1 44606056 . A . PASS END=44606056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:28,0 chr1 44606057 . C . PASS END=44606057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:29,0 chr1 44606058 . A . PASS END=44606058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,966:0,59,255:29,0 chr1 44606059 . G . PASS END=44606060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,963:0,73,255:29,0 chr1 44606061 . G . PASS END=44606061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 44606062 . G . PASS END=44606062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 44606063 . T . PASS END=44606064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1081:0,93,255:31,0 chr1 44606065 . C . PASS END=44606065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 44606066 . T . PASS END=44606067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 44606068 . G . PASS END=44606069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1023:0,60,255:30,0 chr1 44606070 . T . PASS END=44606072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:34,0 chr1 44606073 . C . PASS END=44606085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1164:0,85,255:40,0 chr1 44606086 . C . LowGQ END=44606086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:0:41:0,0,1163:5,0,255:35,0 chr1 44606087 . A . PASS END=44606189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:42:0,111,1574:0,111,255:40,0 chr1 44606190 . C . PASS END=44606190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:54:55:0,54,1679:0,54,255:40,0 chr1 44606191 . T . PASS END=44606198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:55:0,87,1705:0,87,255:40,0 chr1 44606199 . C . PASS END=44606199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:41:58:0,41,1765:0,41,255:40,0 chr1 44606200 . A . PASS END=44606213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,99,1800:0,99,255:40,0 chr1 44606214 . C . PASS END=44606214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:61:59:0,61,1972:0,61,255:40,0 chr1 44606215 . T . PASS END=44606215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:50:59:0,50,1791:0,50,255:40,0 chr1 44606216 . T . PASS END=44606216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,160,255:40,0 chr1 44606217 . G . PASS END=44606253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:90:50:0,90,1593:0,90,255:40,0 chr1 44606254 . C T, 87.79 PASS DP=45;MQ=37.27;MQRankSum=3.224;ReadPosRankSum=0.932;FractionInformativeReads=0.933;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:5,37,0:0.881,0.000:42:3,19,0:2,18,0:44:126,47,0,1092,189,1234:255,0,53:6,0:8.7787e+01,4.4037e+01,1.7137e-04,4.5000e+02,2.2086e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,0,21,16:3,2,19,18 chr1 44606255 . A . PASS END=44606256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr1 44606257 . C . PASS END=44606257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1592:0,58,255:40,0 chr1 44606258 . T . PASS END=44606260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,105,1580:0,105,255:40,0 chr1 44606261 . C . PASS END=44606261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:60:47:0,60,1443:0,60,255:40,0 chr1 44606262 . C . PASS END=44606262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 44606263 . C . PASS END=44606263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1535:0,77,255:40,0 chr1 44606264 . C . PASS END=44606291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:47:0,81,1473:0,81,255:40,0 chr1 44606292 . T . PASS END=44606292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 44606293 . C . PASS END=44606293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:68:52:0,68,1690:0,68,255:40,0 chr1 44606294 . A . PASS END=44606527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:52:0,105,1800:0,105,255:40,0 chr1 44606528 . T . PASS END=44606564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:62:0,120,1800:0,121,255:40,0 chr1 44606565 . A G, 233.14 PASS DP=62;MQ=208.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,29,0:0,33,0:183:271,186,0,2341,186,2341:255,192,0:0,0:2.3314e+02,1.8314e+02,0.0000e+00,4.5000e+02,2.1791e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,36:0,0,33,29 chr1 44606566 . G . PASS END=44606602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,152,255:40,0 chr1 44606603 . C . PASS END=44607303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,101,1620:0,101,255:40,0 chr1 44679426 . A . PASS END=44679428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,969:0,72,255:25,0 chr1 44679429 . G . PASS END=44679429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 44679430 . C . PASS END=44679441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:26:0,71,962:0,71,255:26,0 chr1 44679442 . A . PASS END=44679447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 44679448 . G . PASS END=44679448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 44679449 . G . PASS END=44679449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 44679450 . G . PASS END=44679450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 44679451 . A . PASS END=44679518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:32:0,91,1158:0,91,255:40,0 chr1 44679519 . A . PASS END=44679525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1305:0,99,255:32,0 chr1 44679526 . A . PASS END=44679526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:29,0 chr1 44679527 . C . PASS END=44679527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 44679528 . A . PASS END=44679530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 44680022 . A . PASS END=44680063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1016:0,85,255:35,0 chr1 44680064 . C . PASS END=44680064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 44680065 . C . PASS END=44680080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1396:0,101,255:36,0 chr1 44680081 . G . PASS END=44680081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr1 44680082 . G . PASS END=44680100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,81,255:34,0 chr1 44680101 . A . PASS END=44680101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 44680102 . C . PASS END=44680106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 44680107 . A . PASS END=44680107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:27,0 chr1 44680108 . C . PASS END=44680109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 44680110 . A . PASS END=44680110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 44680111 . G . PASS END=44680113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr1 44680211 . C . PASS END=44680213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 44680214 . G . PASS END=44680214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 44680215 . G . PASS END=44680215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44680216 . G . PASS END=44680217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 44680218 . T . PASS END=44680218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 44680219 . C . PASS END=44680219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 44680220 . C . PASS END=44680220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:20,0 chr1 44680221 . T . PASS END=44680224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 44680225 . T . PASS END=44680238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,46,255:19,0 chr1 44680239 . C . PASS END=44680240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 44680241 . G . PASS END=44680242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:20,0 chr1 44680243 . A . PASS END=44680243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 44680244 . G . PASS END=44680244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 44680245 . G . PASS END=44680252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44680253 . G . PASS END=44680255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,658:0,46,255:19,0 chr1 44680256 . T . PASS END=44680272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 44680273 . A . PASS END=44680273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,657:0,30,255:19,0 chr1 44680274 . C . PASS END=44680283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 44680284 . A . PASS END=44680288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,55,255:19,0 chr1 44680375 . G . PASS END=44680377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr1 44680378 . T . PASS END=44680378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 44680379 . G . PASS END=44680395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 44680396 . C . PASS END=44680408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,703:0,60,255:22,0 chr1 44680409 . C . PASS END=44680409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 44680410 . A . PASS END=44680416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 44680417 . C . PASS END=44680417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 44680418 . C . PASS END=44680422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 44680423 . A . PASS END=44680423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:19,0 chr1 44680424 . G . PASS END=44680424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 44680425 . T . PASS END=44680425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 44680426 . G . PASS END=44680451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,823:0,62,255:26,0 chr1 44680452 . T . PASS END=44680468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 44680469 . A . PASS END=44680469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 44680470 . T . PASS END=44680474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 44680475 . T . PASS END=44680475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr1 44680476 . T . PASS END=44680522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:32,0 chr1 44680523 . C . PASS END=44680523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 44680524 . G . PASS END=44680524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 44680525 . T . PASS END=44680535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:25,0 chr1 44680536 . A . PASS END=44680553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:19:0,54,676:0,57,255:19,0 chr1 44680554 . T . PASS END=44680554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 44680555 . T . PASS END=44680570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,706:0,57,255:19,0 chr1 44683983 . A . PASS END=44684132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:34:0,91,1235:0,91,255:40,0 chr1 44684133 . C . PASS END=44684141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,75,255:26,0 chr1 44684260 . A . PASS END=44684266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 44684267 . C . PASS END=44684267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 44684268 . T . PASS END=44684402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:27:0,80,962:0,80,255:40,0 chr1 44684403 . T . PASS END=44684403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1253:0,78,255:35,0 chr1 44684404 . C . PASS END=44684427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1258:0,84,255:36,0 chr1 44684728 . G . PASS END=44684731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 44684732 . C . PASS END=44684732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 44684733 . A . PASS END=44684913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:31:0,87,1187:0,87,255:40,0 chr1 44685078 . G . PASS END=44685149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1260:0,99,255:40,0 chr1 44685478 . A . PASS END=44685550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:35:0,95,1296:0,95,255:40,0 chr1 44685689 . A . PASS END=44685755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,620:0,41,255:18,0 chr1 44685756 . G . PASS END=44685766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 44685767 . T . PASS END=44685769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:53:20:0,53,798:0,53,255:21,0 chr1 44685770 . A . PASS END=44685771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 44685772 . C . PASS END=44685772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 44685773 . A . PASS END=44685774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 44685775 . G . PASS END=44685775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 44685776 . C . PASS END=44685779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 44685780 . T . PASS END=44685805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,743:0,47,255:19,0 chr1 44685806 . T . PASS END=44685812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:21,0 chr1 44685813 . G . PASS END=44685813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr1 44685814 . C . PASS END=44685814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44685815 . A . PASS END=44685830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,737:0,50,255:19,0 chr1 44685831 . G . PASS END=44685845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 44685846 . G . PASS END=44685846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:20,0 chr1 44685847 . C . PASS END=44685901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,825:0,66,255:26,0 chr1 44685902 . C . PASS END=44685907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 44685908 . C . PASS END=44685921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,1022:0,68,255:25,0 chr1 44685922 . G . PASS END=44685922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 44685923 . G . PASS END=44685970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:26,0 chr1 44685971 . C . PASS END=44685971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:22,0 chr1 44685972 . G . PASS END=44685983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,65,255:23,0 chr1 44685984 . A . PASS END=44685989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,56,255:20,0 chr1 44685990 . C . PASS END=44685994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 44685995 . C . PASS END=44686003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:18,0 chr1 44686004 . A . PASS END=44686028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,814:0,63,255:26,0 chr1 44686029 . G . PASS END=44686034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 44686035 . G . PASS END=44686035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 44686036 . C . PASS END=44686051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:26,0 chr1 44686052 . C . PASS END=44686052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 44686053 . T . PASS END=44686053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 44686054 . C . PASS END=44686054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 44686055 . C . PASS END=44686099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,884:0,66,255:24,0 chr1 44686100 . G . PASS END=44686107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,836:0,53,255:19,0 chr1 44686231 . A . PASS END=44686231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 44686232 . G . PASS END=44686234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1040:0,90,255:31,0 chr1 44686235 . A . PASS END=44686235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,1 chr1 44686236 . G . PASS END=44686290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1197:0,91,255:37,0 chr1 44687230 . T . PASS END=44687305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:91:37:0,91,1346:0,91,255:40,0 chr1 44687306 . C . PASS END=44687306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:31,0 chr1 44687307 . A . PASS END=44687312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,88,255:31,0 chr1 44696084 . C . PASS END=44696084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 44696085 . T . PASS END=44696085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 44696086 . A . PASS END=44696092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,560:0,51,255:18,0 chr1 44696093 . A . PASS END=44696093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 44696094 . C . PASS END=44696099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 44696100 . A . PASS END=44696100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 44696101 . G . PASS END=44696104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 44696105 . A . PASS END=44696111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44696112 . A . PASS END=44696114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 44696115 . C . PASS END=44696118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44696119 . G . PASS END=44696129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 44696130 . A . PASS END=44696142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 44698044 . C . PASS END=44698060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:97:45:0,97,1651:0,97,255:40,1 chr1 44707595 . C . PASS END=44707606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 44707607 . C . PASS END=44707607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:23,0 chr1 44707608 . C . PASS END=44707623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 44707624 . T . PASS END=44707626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 44707627 . A . PASS END=44707627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 44707628 . G . PASS END=44707632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 44707633 . G . PASS END=44707633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr1 44707634 . T . PASS END=44707649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 44707650 . A . PASS END=44707650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr1 44707651 . A . PASS END=44707653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 44707654 . A . PASS END=44707658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 44707659 . C . PASS END=44707734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:29:0,80,1185:0,80,255:37,0 chr1 44707735 . G . PASS END=44707752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr1 44713611 . C . PASS END=44713614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 44713615 . G . PASS END=44713615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 44713616 . C . PASS END=44713658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:18,0 chr1 44713659 . T . PASS END=44713659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 44713660 . C . PASS END=44713710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,515:0,48,255:18,0 chr1 44749658 . C . PASS END=44749673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,739:0,63,255:24,0 chr1 44749674 . T . PASS END=44749674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 44749675 . T . PASS END=44749678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 44749679 . C . PASS END=44749679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 44749680 . T . PASS END=44749692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:24,0 chr1 44749693 . C . PASS END=44749693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,828:0,28,255:22,0 chr1 44749694 . C . PASS END=44749699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 44749700 . C . PASS END=44749701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,875:0,56,255:23,0 chr1 44749702 . G . PASS END=44749710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 44749711 . A . PASS END=44749711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 44749712 . G . PASS END=44749723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,922:0,72,255:24,0 chr1 44749724 . T . PASS END=44749738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:17,0 chr1 44749739 . G . PASS END=44749739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:13,0 chr1 44749740 . C . PASS END=44749741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 44750507 . C . PASS END=44750579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1260:0,84,255:40,0 chr1 44773982 . A . PASS END=44774073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:35:0,98,1296:0,98,255:40,0 chr1 44778841 . C . PASS END=44778853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:36:0,80,1343:0,80,255:36,1 chr1 44778854 . T . PASS END=44778854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:66:39:0,66,1323:0,66,255:33,1 chr1 44778855 . G . PASS END=44778855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:39:0,83,1422:0,83,255:34,1 chr1 44778856 . C . PASS END=44778856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:66:39:0,66,1323:0,66,255:33,1 chr1 44778857 . A . PASS END=44778900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1213:0,86,255:37,1 chr1 44785300 . C . PASS END=44785393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:29:0,85,1070:0,85,255:40,0 chr1 44785394 . A . PASS END=44785394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1488:0,79,255:37,0 chr1 44785395 . G . PASS END=44785407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1311:0,84,255:38,0 chr1 44785408 . G . PASS END=44785408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr1 44785409 . A . PASS END=44785416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:37:0,83,1282:0,83,255:36,0 chr1 44788397 . C . PASS END=44788397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 44788398 . A T, 130.81 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,13,0:0,15,0:81:169,84,0,1046,84,1046:255,84,0:0,0:1.3081e+02,8.0811e+01,0.0000e+00,4.5000e+02,1.1558e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,10:0,0,15,13 chr1 44788399 . T . PASS END=44788403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:30,0 chr1 44788404 . T . PASS END=44788404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 44788405 . A . PASS END=44788435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1117:0,90,255:32,0 chr1 44788436 . A . PASS END=44788506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1141:0,82,255:37,0 chr1 44788507 . T . PASS END=44788507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1008:0,46,255:26,0 chr1 44788508 . C . PASS END=44788508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 44788509 . T . PASS END=44788518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,71,255:26,0 chr1 44788519 . G . PASS END=44788519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:20,0 chr1 44788520 . C . PASS END=44788527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:21,0 chr1 44788528 . G . PASS END=44788540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,715:0,49,255:19,0 chr1 44804717 . C . PASS END=44804717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 44804718 . T . PASS END=44804718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 44804719 . G . PASS END=44804723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,762:0,63,255:24,0 chr1 44804724 . T . PASS END=44804724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 44804725 . G . PASS END=44804731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 44804732 . T . PASS END=44804732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 44804733 . G . PASS END=44804742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 44804743 . A . PASS END=44804744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,831:0,55,255:23,0 chr1 44804745 . G . PASS END=44804752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 44804753 . A . PASS END=44804753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 44804754 . A . PASS END=44804758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 44804759 . C . PASS END=44804759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 44804760 . A . PASS END=44804764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 44804765 . T . PASS END=44804765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 44804766 . A . PASS END=44804791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,894:0,62,255:26,0 chr1 44804792 . G . PASS END=44804804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:35,0 chr1 44804805 . G . PASS END=44804805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:34,0 chr1 44804806 . C . PASS END=44804950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,87,255:40,0 chr1 44804951 . A . PASS END=44804951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:25,0 chr1 44804952 . G . PASS END=44804952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1143:0,53,255:24,0 chr1 44804953 . T . PASS END=44804953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 44804954 . C . PASS END=44804959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1016:0,60,255:26,0 chr1 44804960 . A . PASS END=44804960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,921:0,54,255:24,0 chr1 44804961 . G . PASS END=44804961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 44804962 . G . PASS END=44804962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:24,0 chr1 44804963 . T . PASS END=44804964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:24,0 chr1 44804965 . C . PASS END=44804977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:21:0,42,630:0,45,255:21,0 chr1 44804978 . T . LowGQ END=44804978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,607:15,0,255:14,0 chr1 44804979 . C . PASS END=44804981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 44804982 . G . PASS END=44804982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:13,0 chr1 44804983 . A . PASS END=44804984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 44804985 . G . PASS END=44804985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,529:0,24,255:11,0 chr1 44804986 . C . PASS END=44804987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,51,255:11,0 chr1 44804988 . T . LowGQ END=44804988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,394:35,0,255:9,0 chr1 44804989 . C . PASS END=44804989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:30:18:0,30,450:0,37,255:9,0 chr1 44804990 . T . PASS END=44804990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:10,0 chr1 44804991 . A . PASS END=44804994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:10,0 chr1 44818522 . C . PASS END=44818597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:44:0,94,1637:0,94,255:40,0 chr1 44820564 . C . PASS END=44820569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 44820570 . G . PASS END=44820570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 44820571 . T . PASS END=44820571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,380:0,9,255:12,0 chr1 44820572 . G . PASS END=44820581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr1 44820582 . A . PASS END=44820582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 44820583 . C . PASS END=44820643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,515:0,45,255:19,0 chr1 44820644 . C . PASS END=44820669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 44820670 . C . LowGQ END=44820670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 44820671 . C . PASS END=44820671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 44820672 . G . LowGQ END=44820673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:11,0 chr1 44820674 . C . PASS END=44820674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 44820675 . A . LowGQ END=44820678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:10,0 chr1 44820679 . G . PASS END=44820683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 44820684 . A . PASS END=44820684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr1 44820685 . G . PASS END=44820685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 44820686 . A . PASS END=44820686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 44820687 . G . PASS END=44820696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 44820697 . A . PASS END=44820698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 44877770 . A . PASS END=44877772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 44877773 . G . PASS END=44877789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:19,0 chr1 44877790 . C . PASS END=44877792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 44877793 . C . PASS END=44877816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,645:0,54,255:19,0 chr1 44877817 . T . PASS END=44877822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 44877823 . C . PASS END=44877823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 44877824 . C . PASS END=44877826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44877827 . C . PASS END=44877827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 44877828 . T . PASS END=44877831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44877832 . A . PASS END=44877833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 44877834 . C . PASS END=44877834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,875:0,31,255:22,0 chr1 44877835 . C . PASS END=44877850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 44877851 . C . PASS END=44877851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 44877852 . T . PASS END=44877864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 44877865 . T . PASS END=44877865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 44877866 . G . PASS END=44877881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,906:0,62,255:26,0 chr1 44877882 . C . PASS END=44877888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:30,0 chr1 44877889 . C . PASS END=44877889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 44877890 . C . PASS END=44877921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1103:0,83,255:33,0 chr1 44877922 . T . PASS END=44877922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:27,0 chr1 44877923 . G . PASS END=44877932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1161:0,80,255:28,0 chr1 44877933 . A . PASS END=44877933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 44877934 . C . PASS END=44877935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 44877936 . A . PASS END=44877936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 44877937 . G . PASS END=44877938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 44877939 . A . PASS END=44877941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 44877942 . T . PASS END=44877962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,977:0,84,255:28,0 chr1 44877963 . G . PASS END=44878001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:23:0,61,886:0,61,255:26,0 chr1 44878002 . G . PASS END=44878002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 44878003 . G . PASS END=44878006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 44878007 . C . PASS END=44878007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 44878008 . C . PASS END=44878008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 44878009 . A . PASS END=44878009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 44878010 . G . PASS END=44878012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 44878013 . A . PASS END=44878013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 44878014 . C . PASS END=44878019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:22,0 chr1 44878020 . C . PASS END=44878020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,0 chr1 44878021 . C . PASS END=44878029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,734:0,66,255:22,0 chr1 44878030 . T . PASS END=44878041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,47,255:19,0 chr1 44878042 . T . PASS END=44878045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 44878046 . C . PASS END=44878047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:14,0 chr1 44878048 . A . PASS END=44878048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 44878049 . C . PASS END=44878051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:15,0 chr1 44878052 . C . PASS END=44878052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:14,0 chr1 44878053 . T . PASS END=44878056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 44878057 . C . PASS END=44878063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 44878064 . T . PASS END=44878065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 44878066 . T . PASS END=44878066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 44878067 . G . PASS END=44878075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 44878076 . A . PASS END=44878078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:15,0 chr1 44878079 . C . PASS END=44878083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 44878084 . T . PASS END=44878085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 44878086 . G . PASS END=44878086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 44878087 . C . PASS END=44878087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 44878088 . A . PASS END=44878094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 44878095 . T . PASS END=44878100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 44878101 . T . PASS END=44878101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 44878102 . G . PASS END=44878102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 44878103 . C . PASS END=44878104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 44878105 . G . PASS END=44878109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 44878110 . A . PASS END=44878110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 44878111 . T . PASS END=44878125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 44878126 . T . PASS END=44878126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 44878127 . T . PASS END=44878128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 44878129 . C . PASS END=44878129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 44878130 . C . PASS END=44878140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,841:0,72,255:24,0 chr1 44878141 . C . PASS END=44878141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 44878142 . T . PASS END=44878167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:24:0,68,1030:0,68,255:26,0 chr1 44878168 . G . PASS END=44878174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:29,0 chr1 44878175 . T . PASS END=44878175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:28,0 chr1 44878176 . T . PASS END=44878398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1050:0,84,255:40,0 chr1 45038674 . G . PASS END=45038677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,191,255:40,0 chr1 45079837 . G . PASS END=45079841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 45079842 . A . PASS END=45079842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 45079843 . A . PASS END=45079867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,823:0,65,255:26,0 chr1 45079868 . C . PASS END=45079893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr1 45079894 . A . PASS END=45079909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:26,0 chr1 45079910 . C . PASS END=45079910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 45079911 . A . PASS END=45079945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,813:0,66,255:23,0 chr1 45079946 . G . PASS END=45079969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:19,0 chr1 45088414 . C . PASS END=45088417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1174:0,88,255:34,0 chr1 45088418 . A . PASS END=45088418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:31,0 chr1 45088419 . A . PASS END=45088459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1279:0,84,255:35,0 chr1 45091969 . T . PASS END=45092070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:35:0,96,1296:0,105,255:40,0 chr1 45097827 . A . PASS END=45097830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 45097831 . C . PASS END=45097866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,466:0,41,255:19,0 chr1 45097867 . G . PASS END=45097884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 45098015 . A . PASS END=45098025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 45098026 . A . PASS END=45098026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:20,0 chr1 45098027 . G . PASS END=45098048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,876:0,69,255:23,0 chr1 45098049 . G . PASS END=45098049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 45098050 . A . PASS END=45098051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 45098052 . T . PASS END=45098054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 45098055 . A . PASS END=45098057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr1 45101217 . C . PASS END=45101338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,118,1800:0,118,255:40,0 chr1 45101702 . A . PASS END=45101834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:45:0,114,1710:0,135,255:40,0 chr1 45102059 . C . PASS END=45102104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,120,1800:0,135,255:40,0 chr1 45102105 . G . PASS END=45102105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1831:0,79,255:40,0 chr1 45102106 . G . PASS END=45102129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,120,1800:0,124,255:40,0 chr1 45110370 . G . PASS END=45110376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:36:0,98,1327:0,98,255:37,0 chr1 45110377 . C . PASS END=45110377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1286:0,59,255:35,0 chr1 45110378 . T . PASS END=45110457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:32:0,80,1123:0,80,255:40,0 chr1 45110458 . G . PASS END=45110466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 45110667 . A . PASS END=45110679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 45110680 . G . PASS END=45110680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45110681 . A . PASS END=45110681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45110682 . T . PASS END=45110682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 45110683 . G . PASS END=45110683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45110684 . T . PASS END=45110693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,74,255:26,0 chr1 45110694 . C . PASS END=45110695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45110696 . C . PASS END=45110697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 45110698 . G . PASS END=45110709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 45110710 . G . PASS END=45110710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 45110711 . G . PASS END=45110724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 45110725 . A . PASS END=45110725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:30,0 chr1 45110726 . G . PASS END=45110743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr1 45110744 . C . PASS END=45110753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,83,255:26,0 chr1 45110893 . T . PASS END=45110899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 45110900 . C . PASS END=45110948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1074:0,80,255:33,0 chr1 45111032 . C . PASS END=45111160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,117,1781:0,117,255:40,0 chr1 45115333 . A . PASS END=45115441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:44:0,115,1800:0,115,255:40,0 chr1 45115555 . G . PASS END=45115613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:85:35:0,85,1327:0,85,255:40,0 chr1 45115614 . C . PASS END=45115614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 45115615 . T . PASS END=45115629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:35,0 chr1 45116376 . G . PASS END=45116384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 45116385 . A . PASS END=45116389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,940:0,81,255:28,0 chr1 45116390 . C . PASS END=45116398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 45116399 . G . PASS END=45116418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:30,0 chr1 45116419 . C . PASS END=45116438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 45116439 . T . PASS END=45116447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 45120231 . T . PASS END=45120252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 45120253 . A . PASS END=45120259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 45120260 . C . PASS END=45120261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 45120262 . A . PASS END=45120266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45120267 . G . PASS END=45120268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45120269 . G . PASS END=45120270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 45120271 . C . PASS END=45120271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 45120272 . T . PASS END=45120334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1111:0,80,255:30,0 chr1 45120335 . A . PASS END=45120356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:24,0 chr1 45120357 . C . PASS END=45120362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 45120363 . T . PASS END=45120364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 45120365 . C . PASS END=45120409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 45120410 . C . PASS END=45120411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 45120412 . C . PASS END=45120425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 45120426 . G . PASS END=45120442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,465:0,36,255:13,0 chr1 45120443 . A . PASS END=45120443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 45120444 . G . PASS END=45120452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:14,0 chr1 45120453 . C . PASS END=45120460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 45120461 . T . PASS END=45120461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45120462 . G . PASS END=45120572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:19,0 chr1 45120573 . G . PASS END=45120585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 45120586 . G . PASS END=45120586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45120587 . C . PASS END=45120589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45120590 . C . PASS END=45120605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 45120606 . C . PASS END=45120622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 45120623 . C . PASS END=45120628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,684:0,46,255:19,0 chr1 45120629 . G . PASS END=45120635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 45120636 . G . PASS END=45120636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 45120637 . T . PASS END=45120638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr1 45120639 . A . PASS END=45120639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 45120640 . A . PASS END=45120640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 45120641 . A . PASS END=45120641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 45120642 . G . PASS END=45120689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:24,0 chr1 45120690 . C . PASS END=45120690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 45120691 . T . PASS END=45120702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 45120703 . C . PASS END=45120704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 45120705 . G . PASS END=45120723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,901:0,69,255:25,0 chr1 45120724 . T . PASS END=45120724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 45120725 . T . PASS END=45120725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 45120726 . G . PASS END=45120726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 45120727 . C . PASS END=45120727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 45120728 . T . PASS END=45120732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 45120733 . A . PASS END=45120734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45120735 . A . PASS END=45120735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 45120736 . T . PASS END=45120742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:30,0 chr1 45120743 . G . PASS END=45120743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 45120744 . C . PASS END=45120749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 45120750 . C . PASS END=45120750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,903:0,57,255:25,0 chr1 45120751 . T . PASS END=45120751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 45120752 . C . PASS END=45120752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 45120753 . C . PASS END=45120760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,92,255:31,0 chr1 45120761 . T . PASS END=45120761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 45120762 . C . PASS END=45120779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1103:0,82,255:31,0 chr1 45120780 . C . PASS END=45120781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 45120782 . C . PASS END=45120791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 45120792 . C . PASS END=45120792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 45120793 . T . PASS END=45120804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 45120805 . C . PASS END=45120808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 45120809 . G . PASS END=45120811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45120812 . A . PASS END=45120827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 45120828 . C . PASS END=45120834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 45120835 . A . PASS END=45120863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 45120864 . T . PASS END=45120876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 45120877 . C . PASS END=45120881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,38,255:13,0 chr1 45125846 . C . PASS END=45125855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,634:0,60,255:22,0 chr1 45125856 . T . PASS END=45125860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:30:23:0,30,814:0,30,255:25,0 chr1 45125861 . G . PASS END=45125861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:24,0 chr1 45125862 . G . PASS END=45125862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 45125863 . C . PASS END=45125865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr1 45125866 . T . PASS END=45125866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45125867 . G . PASS END=45125868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:30,0 chr1 45125869 . A . PASS END=45125870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 45125871 . T . PASS END=45125872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:30,0 chr1 45125873 . G . PASS END=45125874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 45125875 . C . PASS END=45125876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1249:0,99,255:33,0 chr1 45125877 . A . PASS END=45125877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1147:0,44,255:31,0 chr1 45125878 . G . PASS END=45125880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:64:34:0,64,1241:0,64,255:36,0 chr1 45125881 . T . PASS END=45125881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1248:0,94,255:36,0 chr1 45125882 . C . PASS END=45125882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 45125883 . T . PASS END=45125883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1412:0,111,255:37,0 chr1 45125884 . T . PASS END=45125885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1325:0,72,255:35,0 chr1 45125886 . T . PASS END=45125886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 45125887 . C . PASS END=45125887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 45125888 . C . PASS END=45125888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1282:0,94,255:34,0 chr1 45125889 . T . PASS END=45125892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 45125893 . A . PASS END=45125893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 45125894 . G . PASS END=45125894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:32,0 chr1 45125895 . C . PASS END=45125895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 45125896 . C . PASS END=45125897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr1 45125898 . C . PASS END=45125931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:34,0 chr1 45125932 . T . PASS END=45125943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:25,0 chr1 45125944 . T . PASS END=45125948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 45125949 . C . PASS END=45125949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 45125950 . C . PASS END=45125954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 45125955 . C . PASS END=45125955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45125956 . T . PASS END=45125967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 45140003 . T . PASS END=45140030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 45140031 . C . PASS END=45140031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 45140032 . T . PASS END=45140034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 45140035 . A . PASS END=45140035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 45140036 . T . PASS END=45140040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45140041 . T . PASS END=45140061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 45140062 . A . PASS END=45140062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 45140063 . T . PASS END=45140063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 45150324 . A . PASS END=45150328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,120,1800:0,129,255:40,0 chr1 45155370 . A . PASS END=45155374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 45155375 . T . PASS END=45155375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 45155376 . T . PASS END=45155378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 45155379 . A . PASS END=45155379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 45155380 . T . PASS END=45155382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45155383 . A . PASS END=45155383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,879:0,45,255:27,0 chr1 45155384 . G . PASS END=45155384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 45155385 . G . PASS END=45155385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 45155386 . A . PASS END=45155386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 45155387 . G . PASS END=45155389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45155390 . G . PASS END=45155390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr1 45155391 . G . PASS END=45155393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45155394 . G . PASS END=45155398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 45155399 . T . PASS END=45155399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 45155400 . A . PASS END=45155400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:27,0 chr1 45155401 . G . PASS END=45155401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45155402 . C . PASS END=45155406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 45155407 . T . PASS END=45155550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1014:0,87,255:40,0 chr1 45155551 . G . PASS END=45155575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:40:0,90,1350:0,96,255:40,0 chr1 45162774 . C . PASS END=45162842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,170,255:40,0 chr1 45163735 . T . PASS END=45163901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,1177:0,84,255:40,0 chr1 45166595 . G . PASS END=45166595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 45166596 . T . PASS END=45166611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1057:0,84,255:29,0 chr1 45166612 . G . PASS END=45166612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 45166613 . A . PASS END=45166620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1064:0,84,255:29,0 chr1 45166621 . G . PASS END=45166621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 45166622 . C . PASS END=45166786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr1 45166787 . C . PASS END=45166791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 45169761 . C . PASS END=45169762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 45169763 . A . PASS END=45169764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45169765 . T . PASS END=45169767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,909:0,57,255:28,0 chr1 45169768 . T . PASS END=45169768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 45169769 . T . PASS END=45169771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,997:0,87,255:30,0 chr1 45169772 . G . PASS END=45169772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 45169773 . A . PASS END=45169774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 45169775 . C . PASS END=45169775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr1 45169776 . A . PASS END=45169776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 45169777 . C . PASS END=45169777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr1 45169778 . A . PASS END=45169785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:32,0 chr1 45169786 . G . PASS END=45169787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,1070:0,66,255:27,0 chr1 45169788 . A . PASS END=45169788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1191:0,91,255:30,0 chr1 45169789 . T . PASS END=45169789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:30,0 chr1 45169790 . C . PASS END=45169802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1258:0,89,255:34,0 chr1 45169803 . C . PASS END=45169803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:31,0 chr1 45169804 . T . PASS END=45169804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 45169805 . G . PASS END=45169805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:31,0 chr1 45169806 . A . PASS END=45169814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1089:0,82,255:32,0 chr1 45169815 . G . PASS END=45169833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr1 45169834 . T . PASS END=45169834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr1 45169835 . C . PASS END=45169835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 45169836 . C . PASS END=45169837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 45169838 . G . PASS END=45169845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 45174353 . T . PASS END=45174453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,102,1530:0,113,255:40,0 chr1 45185072 . A . PASS END=45185076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:80:44:0,80,1521:0,80,255:39,0 chr1 45187852 . T . PASS END=45187863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,979:0,84,255:28,0 chr1 45187864 . G . PASS END=45187864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 45187865 . G . PASS END=45187867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 45187868 . C . PASS END=45187868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 45187869 . T . PASS END=45187919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1205:0,81,255:40,0 chr1 45189475 . A . PASS END=45189484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 45189485 . T . PASS END=45189485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 45189486 . C . PASS END=45189522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 45189523 . G . PASS END=45189529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 45189530 . T . PASS END=45189530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 45189531 . C . PASS END=45189550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 45189551 . G . PASS END=45189557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 45189794 . C . PASS END=45189803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,501:0,48,255:16,0 chr1 45189804 . G . PASS END=45189805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 45189806 . T . PASS END=45189807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 45189808 . A . PASS END=45189808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 45189809 . A . PASS END=45189815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 45189816 . G . PASS END=45189816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 45189817 . G . PASS END=45189820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 45189821 . G . PASS END=45189822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 45189823 . T . PASS END=45189823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:21,0 chr1 45189824 . A . PASS END=45189831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 45189832 . C . PASS END=45189832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 45189833 . G . PASS END=45189842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 45189843 . G . PASS END=45189851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 45189852 . C . PASS END=45189852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:28,0 chr1 45189853 . C . PASS END=45189865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 45189866 . T . PASS END=45189866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 45189867 . G . PASS END=45189870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 45189871 . C . PASS END=45189871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 45189872 . C . PASS END=45189905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,950:0,84,255:29,0 chr1 45189906 . G . PASS END=45189906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:28,0 chr1 45189907 . A . PASS END=45189916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 45189992 . A . PASS END=45189993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 45189994 . C . PASS END=45189994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:23,0 chr1 45189995 . C . PASS END=45190042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,876:0,61,255:26,0 chr1 45190043 . C . PASS END=45190043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 45190044 . C . PASS END=45190053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 45190054 . A . PASS END=45190054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 45190055 . A . PASS END=45190061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 45190062 . C . PASS END=45190062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr1 45190063 . G . PASS END=45190065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 45190066 . T . PASS END=45190066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 45190067 . A . PASS END=45190073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:21,0 chr1 45190074 . C . PASS END=45190074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 45190075 . A . PASS END=45190081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 45190082 . A . PASS END=45190082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 45190083 . G . PASS END=45190091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 45190092 . T . PASS END=45190149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 45190150 . G . PASS END=45190152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 45190153 . C . PASS END=45190153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 45190154 . G . PASS END=45190166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,900:0,66,255:24,0 chr1 45190167 . G . PASS END=45190169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 45190170 . T . PASS END=45190172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 45190193 . C . PASS END=45190221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,933:0,65,255:26,0 chr1 45190222 . G . PASS END=45190223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 45190224 . A . PASS END=45190244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 45190245 . G . PASS END=45190245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 45190246 . A . PASS END=45190265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:25,0 chr1 45190266 . G . PASS END=45190266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 45190267 . T . PASS END=45190269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45190270 . G . PASS END=45190278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 45190279 . T . PASS END=45190279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:17,0 chr1 45190280 . G . PASS END=45190304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,665:0,41,255:18,0 chr1 45190305 . A . PASS END=45190305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 45190306 . G . PASS END=45190309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 45190310 . C . PASS END=45190310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 45190311 . A . PASS END=45190313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 45190314 . C . PASS END=45190314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 45190315 . A . PASS END=45190316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 45190317 . C . PASS END=45190317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 45190318 . G . PASS END=45190328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 45190329 . C . PASS END=45190329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 45190330 . T . PASS END=45190330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 45190331 . C . PASS END=45190335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr1 45190336 . T . PASS END=45190336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 45190337 . G . PASS END=45190338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 45190339 . A . PASS END=45190339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 45190340 . G . PASS END=45190340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 45190434 . T . PASS END=45190511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr1 45190705 . G . PASS END=45190713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr1 45190714 . C . PASS END=45190714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 45190715 . C . PASS END=45190725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 45190726 . T . PASS END=45190726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:12,0 chr1 45190727 . G . PASS END=45190732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45190733 . T . PASS END=45190733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 45190734 . C . PASS END=45190745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:17,0 chr1 45190746 . C . PASS END=45190746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 45190747 . C . PASS END=45190750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 45190751 . C . PASS END=45190751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 45190752 . T . PASS END=45190756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:43:17:0,43,653:0,43,255:18,0 chr1 45190757 . G . PASS END=45190760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 45190761 . A . PASS END=45190761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 45190762 . G . PASS END=45190762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 45190763 . A . PASS END=45190763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 45190764 . C . PASS END=45190778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 45190779 . A . PASS END=45190779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,759:0,14,255:19,0 chr1 45190780 . G . PASS END=45190783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45190784 . G . PASS END=45190784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr1 45190785 . G . PASS END=45190798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr1 45190799 . T . PASS END=45190799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 45190800 . G . PASS END=45190800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 45190801 . T . PASS END=45190801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 45190802 . C . PASS END=45190831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 45190832 . A . PASS END=45190832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 45190833 . A . PASS END=45190870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 45190871 . A . PASS END=45190871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 45190872 . C . PASS END=45190874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45190875 . T . PASS END=45190875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 45190876 . C . PASS END=45190881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 45190882 . T . PASS END=45190882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 45190883 . A . PASS END=45190883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45190884 . C . PASS END=45190889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,753:0,49,255:19,0 chr1 45190963 . C . PASS END=45190992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:23,0 chr1 45190993 . T . PASS END=45190993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 45190994 . G . PASS END=45191004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,679:0,66,255:25,0 chr1 45191005 . A . PASS END=45191005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 45191006 . T . PASS END=45191019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 45191020 . C . PASS END=45191020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 45191021 . G . PASS END=45191042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 45191043 . C . PASS END=45191070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 45191071 . A . PASS END=45191075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45205605 . A . PASS END=45205653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:32:0,93,1377:0,96,255:40,0 chr1 45205654 . T . PASS END=45205654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr1 45205655 . C . PASS END=45205673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,88,255:37,0 chr1 45205674 . G . PASS END=45205674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:28,0 chr1 45205675 . G . PASS END=45205678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 45205679 . G . PASS END=45205679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:26,0 chr1 45205680 . G . PASS END=45205680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45205681 . A . PASS END=45205681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 45205682 . G . PASS END=45205682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45205683 . C . PASS END=45205700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,68,255:24,0 chr1 45205701 . G . PASS END=45205701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 45205702 . G . PASS END=45205702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 45205703 . G . PASS END=45205704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:23:0,57,855:0,59,255:20,0 chr1 45205705 . C . PASS END=45205706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 45205707 . C . PASS END=45205707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 45205708 . G . PASS END=45205712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 45205713 . C . PASS END=45205713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 45205714 . G . PASS END=45205714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45206585 . G . PASS END=45206588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,879:0,75,255:26,0 chr1 45206589 . A . PASS END=45206679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,940:0,81,255:40,0 chr1 45212429 . A . PASS END=45212431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,214,255:40,0 chr1 45213056 . A . PASS END=45213157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:39:0,83,1183:0,83,255:40,0 chr1 45213324 . A . PASS END=45213372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:81:0,120,1800:0,213,255:40,0 chr1 45216114 . G . PASS END=45216127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 45216128 . T . PASS END=45216128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 45216129 . C . PASS END=45216135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,659:0,41,255:18,0 chr1 45216136 . C . PASS END=45216136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 45216137 . A . PASS END=45216151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 45216152 . G . PASS END=45216155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 45216156 . T . PASS END=45216156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:20,0 chr1 45216157 . T . PASS END=45216163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr1 45216164 . A . PASS END=45216164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:23,0 chr1 45216165 . C . PASS END=45216192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,886:0,62,255:25,0 chr1 45216193 . G . PASS END=45216193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 45216194 . C . PASS END=45216204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:23,0 chr1 45216205 . T . PASS END=45216205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 45216206 . G . PASS END=45216224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,783:0,66,255:22,0 chr1 45216225 . T . PASS END=45216225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:20,0 chr1 45216226 . T . PASS END=45216230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 45216231 . T . PASS END=45216236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45218804 . C . PASS END=45218926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,105,1620:0,105,255:40,0 chr1 45219405 . T . PASS END=45219505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:45:0,106,1665:0,106,255:40,0 chr1 45220422 . G . PASS END=45220517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,120,1800:0,134,255:40,0 chr1 45221601 . A . PASS END=45221655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:35:0,85,1305:0,85,255:40,0 chr1 45221747 . A . PASS END=45221909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:42:0,85,1485:0,85,255:40,0 chr1 45223228 . G . PASS END=45223318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,102,1445:0,102,255:40,0 chr1 45223580 . A . PASS END=45223612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,101,1261:0,101,255:37,0 chr1 45223613 . A . PASS END=45223613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1365:0,73,255:36,0 chr1 45223614 . A . PASS END=45223643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1371:0,84,255:40,0 chr1 45223721 . C . PASS END=45223787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:38:0,84,1305:0,84,255:40,0 chr1 45223788 . A . PASS END=45223788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:28,0 chr1 45223789 . T . PASS END=45223812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:32:0,87,1255:0,89,255:34,0 chr1 45224878 . C . PASS END=45224880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 45224881 . T . PASS END=45224883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:19,0 chr1 45224884 . G . PASS END=45224902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,756:0,63,255:25,0 chr1 45224903 . C . PASS END=45224903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 45224904 . C . PASS END=45224909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 45224910 . G . PASS END=45224962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:31,0 chr1 45224963 . A . PASS END=45225006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,845:0,66,255:26,0 chr1 45225007 . G . PASS END=45225020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr1 45225952 . A . PASS END=45225976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1098:0,80,255:34,0 chr1 45225977 . T . PASS END=45225977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1100:0,52,255:31,0 chr1 45225978 . C . PASS END=45226127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1230:0,90,255:40,0 chr1 45226128 . A . PASS END=45226128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 45226129 . A . PASS END=45226138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 45226139 . A . PASS END=45226139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 45226140 . G . PASS END=45226140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 45226141 . T . PASS END=45226141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 45226142 . C . PASS END=45226142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 45226143 . T . PASS END=45226143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:27,0 chr1 45226144 . C . PASS END=45226145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 45226146 . T . PASS END=45226156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:24,0 chr1 45226264 . G . PASS END=45226279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,751:0,60,255:23,0 chr1 45226280 . T . PASS END=45226280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 45226281 . G . PASS END=45226286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 45226287 . G . PASS END=45226291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45226292 . A . PASS END=45226318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,941:0,78,255:26,0 chr1 45226319 . A . PASS END=45226326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 45226327 . C . PASS END=45226374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,923:0,64,255:26,0 chr1 45227588 . A . PASS END=45227626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1663:0,120,255:40,0 chr1 45227627 . A . PASS END=45227627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:59:52:0,59,1552:0,59,255:40,0 chr1 45227628 . C . PASS END=45227643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,130,255:40,0 chr1 45227644 . A . PASS END=45227644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1533:0,75,255:40,0 chr1 45227645 . T . PASS END=45227655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:44:0,93,1521:0,93,255:40,0 chr1 45227901 . G . PASS END=45227965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1094:0,80,255:35,0 chr1 45227966 . T . PASS END=45227966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 45227967 . G . PASS END=45227967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 45228018 . G . PASS END=45228123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:44:0,108,1673:0,108,255:40,0 chr1 45228217 . T . PASS END=45228330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,98,255:40,0 chr1 45232498 . C . PASS END=45232533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1023:0,81,255:35,0 chr1 45232534 . G . PASS END=45232534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr1 45232535 . A . PASS END=45232621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1241:0,89,255:40,0 chr1 45232769 . A . PASS END=45232769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 45232770 . T . PASS END=45232785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,793:0,62,255:26,0 chr1 45232786 . C . PASS END=45232788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 45232789 . C . PASS END=45232789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 45232790 . T . PASS END=45232793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 45232794 . C . PASS END=45232798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 45232799 . A . PASS END=45232807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:30,0 chr1 45232808 . A . PASS END=45232808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:27,0 chr1 45232809 . G . PASS END=45232810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 45232811 . A . PASS END=45232811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,976:0,57,255:26,0 chr1 45232812 . G . PASS END=45232818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 45232819 . A . PASS END=45232819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 45232820 . G . PASS END=45232825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,971:0,84,255:28,0 chr1 45232826 . T . PASS END=45232826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 45232827 . A . PASS END=45232828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45232829 . G . PASS END=45232841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,875:0,67,255:25,0 chr1 45232842 . G . PASS END=45232842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:22,0 chr1 45232843 . C . PASS END=45232851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,945:0,62,255:23,0 chr1 45241269 . A . PASS END=45241272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,95,255:34,0 chr1 45241706 . G . PASS END=45241706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1280:0,102,255:34,0 chr1 45241707 . C . PASS END=45241707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1170:0,71,255:33,0 chr1 45241708 . A . PASS END=45241812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1189:0,102,255:40,0 chr1 45242347 . A . PASS END=45242349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 45242350 . G . PASS END=45242364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:26,0 chr1 45242365 . C . PASS END=45242384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1037:0,84,255:33,0 chr1 45242385 . A . PASS END=45242385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:32,0 chr1 45242386 . G . PASS END=45242392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:35,0 chr1 45242393 . A . PASS END=45242393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1034:0,58,255:33,0 chr1 45242394 . G . PASS END=45242430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1065:0,85,255:36,0 chr1 45242431 . T . PASS END=45242431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr1 45242432 . C . PASS END=45242437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1186:0,86,255:33,0 chr1 45242438 . G . PASS END=45242438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:31,0 chr1 45242439 . C . PASS END=45242446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1241:0,99,255:33,0 chr1 45243286 . G . PASS END=45243426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:42:0,96,1440:0,112,255:40,0 chr1 45243427 . C . PASS END=45243427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1382:0,71,255:32,0 chr1 45243428 . G . PASS END=45243446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1180:0,83,255:33,0 chr1 45243447 . A . PASS END=45243447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 45243448 . A . PASS END=45243455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1072:0,83,255:29,0 chr1 45243456 . A . PASS END=45243456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:27,0 chr1 45243457 . A . PASS END=45243458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45243459 . C . PASS END=45243459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:26,0 chr1 45243460 . T . PASS END=45243461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 45243672 . A . PASS END=45243801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,120,1800:0,132,255:40,0 chr1 45244248 . C . PASS END=45244262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 45244263 . G . PASS END=45244269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 45244270 . A . PASS END=45244270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 45244271 . C . PASS END=45244305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,498:0,40,255:18,0 chr1 45244306 . C . PASS END=45244306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 45244307 . A . PASS END=45244312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 45244313 . T . PASS END=45244333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,404:0,33,255:13,0 chr1 45244334 . A . PASS END=45244337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45244338 . A . PASS END=45244338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 45244339 . G . PASS END=45244340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45244341 . C . PASS END=45244344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 45244345 . C . PASS END=45244347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 45244348 . A . PASS END=45244348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 45244349 . G . PASS END=45244356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 45244357 . A . PASS END=45244357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 45247767 . G . PASS END=45247857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,120,1800:0,129,255:40,0 chr1 45247858 . C . PASS END=45247901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:95:46:0,95,1485:0,95,255:40,0 chr1 45249882 . T . PASS END=45249893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:16,0 chr1 45249894 . G . PASS END=45249894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 45249895 . G . PASS END=45249903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,607:0,44,255:19,0 chr1 45249904 . C . PASS END=45249917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 45249918 . T . PASS END=45249918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,739:0,30,255:21,0 chr1 45249919 . T . PASS END=45249923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 45249924 . C . PASS END=45249924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 45249925 . T . PASS END=45249931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr1 45249932 . G . PASS END=45249932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 45249933 . G . PASS END=45249963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,659:0,61,255:26,0 chr1 45249964 . G . PASS END=45249964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:22,0 chr1 45249965 . C . PASS END=45249968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 45249969 . G . PASS END=45249969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:21,0 chr1 45249970 . A . PASS END=45249977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 45249978 . C . PASS END=45249978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 45249979 . A . PASS END=45249979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45249980 . G . PASS END=45249980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 45249981 . A . PASS END=45249981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45249982 . T . PASS END=45250006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,615:0,43,255:19,0 chr1 45250007 . C G, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=0.810;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,12,0:0.600,0.000:20:5,7,0:3,5,0:48:85,0,48,421,286,707:255,0,250:8,0:5.0000e+01,7.6105e-05,5.1253e+01,4.2108e+02,3.2097e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,4,8:6,2,5,7 chr1 45250008 . G . PASS END=45250008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 45250009 . C . PASS END=45250010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 45250011 . G . PASS END=45250012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,704:0,44,255:20,0 chr1 45250013 . C . PASS END=45250014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45250015 . A . PASS END=45250016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 45250017 . G . PASS END=45250019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45250020 . C . PASS END=45250023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr1 45250024 . A . PASS END=45250025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45250026 . G . PASS END=45250026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 45250027 . C . PASS END=45250027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45250028 . T . PASS END=45250044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,713:0,47,255:19,0 chr1 45250045 . G . PASS END=45250047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,696:0,44,255:19,0 chr1 45250048 . C . PASS END=45250049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 45250050 . T . PASS END=45250050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 45250051 . A . PASS END=45250053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45250054 . C . PASS END=45250054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 45250055 . C . PASS END=45250056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45250057 . A . PASS END=45250068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 45250069 . A . PASS END=45250069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 45250070 . G . PASS END=45250070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 45250071 . C . PASS END=45250079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 45250080 . C . PASS END=45250089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 45250090 . G . PASS END=45250091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 45250092 . C . PASS END=45250092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 45250093 . G . PASS END=45250093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 45250094 . C . PASS END=45250094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:20,0 chr1 45250095 . G . PASS END=45250104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 45250105 . G . PASS END=45250105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 45250106 . A . PASS END=45250113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 45250114 . G . PASS END=45250114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 45250115 . A . PASS END=45250115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 45250116 . C . PASS END=45250116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 45250117 . G . PASS END=45250119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45250120 . T . PASS END=45250126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 45250127 . G . PASS END=45250127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:18,0 chr1 45250128 . C . PASS END=45250141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:19,0 chr1 45250142 . G . PASS END=45250144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 45250145 . C . PASS END=45250145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 45250146 . G . PASS END=45250146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45250147 . T . PASS END=45250147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 45250148 . C . PASS END=45250150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 45250151 . T . PASS END=45250151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 45250152 . C . PASS END=45250153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,38,255:12,0 chr1 45250154 . T . PASS END=45250154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 45250155 . G . PASS END=45250155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 45250301 . C . PASS END=45250303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 45250304 . A . PASS END=45250310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45250311 . A . PASS END=45250311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr1 45250312 . G . PASS END=45250334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 45250335 . G . PASS END=45250358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,436:0,42,255:16,0 chr1 45250359 . C . PASS END=45250360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 45250361 . G . PASS END=45250364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45250365 . A . PASS END=45250365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45250366 . G . PASS END=45250387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 45250388 . T . PASS END=45250393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 45250394 . T . PASS END=45250394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 45250395 . A . PASS END=45250399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 45250400 . T . PASS END=45250403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 45250404 . T . PASS END=45250405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45250406 . T . PASS END=45250455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,947:0,69,255:26,0 chr1 45250577 . C . PASS END=45250609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1164:0,80,255:33,0 chr1 45250610 . A . PASS END=45250610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr1 45250611 . A . PASS END=45250647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1046:0,83,255:33,0 chr1 45250648 . G . PASS END=45250657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,900:0,73,255:26,0 chr1 45250780 . C . PASS END=45250786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 45250787 . C . PASS END=45250787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 45250788 . A . PASS END=45250802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:25,0 chr1 45250803 . A . PASS END=45250803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 45250804 . G . PASS END=45250805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,834:0,75,255:25,0 chr1 45250806 . A . PASS END=45250806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 45250807 . C . PASS END=45250811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,901:0,62,255:26,0 chr1 45250812 . G . PASS END=45250812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 45250813 . C . PASS END=45250814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45250815 . G . PASS END=45250815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45250816 . A . PASS END=45250816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 45250817 . G . PASS END=45250854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1093:0,80,255:33,0 chr1 45250855 . T . PASS END=45250855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 45250856 . G . PASS END=45250922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:31:0,82,1132:0,82,255:33,0 chr1 45250923 . A . PASS END=45250923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,886:0,68,255:31,0 chr1 45250924 . C . PASS END=45250944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1186:0,83,255:33,0 chr1 45250945 . G . PASS END=45250950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1045:0,71,255:26,0 chr1 45250951 . G . PASS END=45250951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 45250952 . A . PASS END=45250965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 45250966 . T . PASS END=45250966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 45250967 . A . PASS END=45250974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 45250975 . C . PASS END=45250975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 45250976 . A . PASS END=45250976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45250977 . C . PASS END=45250977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 45251271 . T . PASS END=45251306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,609:0,51,255:19,0 chr1 45251307 . G . PASS END=45251326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,892:0,66,255:24,0 chr1 45251327 . T . PASS END=45251327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 45251328 . G . PASS END=45251331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 45251332 . C . PASS END=45251332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 45251333 . G . PASS END=45251340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 45251341 . T . PASS END=45251341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 45251342 . T . PASS END=45251348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 45251746 . T . PASS END=45251759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,842:0,72,255:25,0 chr1 45251760 . A . PASS END=45251760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:23,0 chr1 45251761 . G . PASS END=45251769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 45251770 . A . PASS END=45251770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr1 45251771 . T . PASS END=45251777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr1 45251778 . G . PASS END=45251780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 45251781 . T . PASS END=45251791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 45251792 . C . PASS END=45251808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 45251809 . C . PASS END=45251819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 45251820 . A . PASS END=45251820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 45251821 . C . PASS END=45251845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 45251846 . T . PASS END=45251848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 45251849 . A . PASS END=45251883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,939:0,67,255:26,0 chr1 45251884 . T . PASS END=45251889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 45251890 . G . PASS END=45251900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 45252135 . C . PASS END=45252148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,429:0,33,255:13,0 chr1 45252149 . T . PASS END=45252149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:10,0 chr1 45252150 . G . PASS END=45252150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 45252151 . C . PASS END=45252151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:11,0 chr1 45252152 . T . PASS END=45252161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,413:0,39,255:13,0 chr1 45252162 . G . PASS END=45252162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 45252163 . G . PASS END=45252164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 45252165 . A . PASS END=45252165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 45252166 . G . PASS END=45252187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,443:0,39,255:13,0 chr1 45252188 . A . PASS END=45252188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 45252189 . C . PASS END=45252191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 45252192 . A . PASS END=45252192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 45252193 . G . PASS END=45252195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:12,0 chr1 45252196 . C . PASS END=45252196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 45252197 . A . PASS END=45252197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 45252198 . G . PASS END=45252198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 45252199 . C . PASS END=45252199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 45252200 . A . PASS END=45252200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 45252201 . C . PASS END=45252202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 45252203 . A . PASS END=45252203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 45252204 . G . PASS END=45252205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 45252206 . A . PASS END=45252206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 45252207 . C . PASS END=45252234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:14:0,40,520:0,40,255:20,0 chr1 45252235 . G . PASS END=45252235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 45252236 . G . PASS END=45252236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 45252237 . T . PASS END=45252238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 45252239 . C . PASS END=45252284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,714:0,54,255:19,0 chr1 45252285 . A . PASS END=45252286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 45252287 . A . PASS END=45252287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 45252288 . T . PASS END=45252297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:22,0 chr1 45252298 . C . PASS END=45252298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 45252299 . A . PASS END=45252314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:23,0 chr1 45252315 . G . PASS END=45252315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 45252316 . G . PASS END=45252317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 45252318 . T . PASS END=45252326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45252327 . A . PASS END=45252327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:19,0 chr1 45252328 . C . PASS END=45252347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 45252348 . C . PASS END=45252348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 45252349 . C . PASS END=45252368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,668:0,43,255:19,0 chr1 45253044 . C . PASS END=45253138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:34:0,87,1257:0,89,255:40,0 chr1 45253226 . C . PASS END=45253229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,684:0,57,255:19,0 chr1 45253230 . A . PASS END=45253247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:20:0,60,753:0,60,255:26,0 chr1 45253248 . C . PASS END=45253255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 45253256 . G . PASS END=45253256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 45253257 . C . PASS END=45253273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1022:0,87,255:31,0 chr1 45253274 . T . PASS END=45253274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 45253275 . C . PASS END=45253295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1224:0,83,255:33,0 chr1 45253296 . T . PASS END=45253296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 45253297 . G . PASS END=45253344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1147:0,80,255:31,0 chr1 45253345 . C . PASS END=45253362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,67,255:26,0 chr1 45253363 . G . PASS END=45253363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 45253364 . T . PASS END=45253366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45253367 . G . PASS END=45253367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 45253368 . A . PASS END=45253368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45253369 . A . PASS END=45253377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:18,0 chr1 45266136 . A . PASS END=45266138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 45266139 . G . PASS END=45266159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:8,0 chr1 45266160 . T . PASS END=45266160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 45266161 . C . PASS END=45266170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,272:0,24,255:9,0 chr1 45266171 . C . PASS END=45266179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:10,0 chr1 45266180 . T . PASS END=45266189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 45266190 . G . PASS END=45266221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr1 45266222 . T . PASS END=45266229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 45266230 . C . PASS END=45266230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 45266231 . C . PASS END=45266231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 45266232 . T . PASS END=45266233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45266234 . G . PASS END=45266234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 45266235 . C . PASS END=45266238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 45266239 . G . PASS END=45266263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:15,0 chr1 45266264 . G . PASS END=45266271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 45266272 . C . PASS END=45266273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 45266274 . T . PASS END=45266333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr1 45266334 . T . PASS END=45266334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 45266335 . T . PASS END=45266337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45266338 . T . PASS END=45266338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 45266339 . G . PASS END=45266345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45266512 . G . PASS END=45266514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 45266515 . G . PASS END=45266543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:19,0 chr1 45266544 . C . PASS END=45266581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:22,0 chr1 45266582 . C . PASS END=45266582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 45266583 . G . PASS END=45266598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 45266599 . A . PASS END=45266601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 45266602 . C . PASS END=45266608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 45266609 . A . PASS END=45266609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45266610 . G . PASS END=45266619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 45266708 . A . PASS END=45266719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,71,255:25,0 chr1 45266720 . A . PASS END=45266725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 45266726 . C . PASS END=45266726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 45266727 . T . PASS END=45266729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:30,0 chr1 45266730 . A . PASS END=45266730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 45266731 . C . PASS END=45266746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1119:0,90,255:30,0 chr1 45266747 . C . PASS END=45266747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 45266748 . G . PASS END=45266751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45266752 . C . PASS END=45266752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 45266753 . A . PASS END=45266756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 45266757 . T . PASS END=45266757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 45266758 . G . PASS END=45266761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,993:0,84,255:28,0 chr1 45266762 . T . PASS END=45266762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 45266763 . T . PASS END=45266765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45266766 . C . PASS END=45266766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr1 45266767 . G . PASS END=45266770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,1078:0,60,255:27,0 chr1 45266771 . C . PASS END=45266771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1006:0,35,255:26,0 chr1 45266772 . A . PASS END=45266772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45266773 . C . PASS END=45266773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 45266774 . T . PASS END=45266774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45266775 . T . PASS END=45266775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr1 45266776 . T . PASS END=45266776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,958:0,51,255:27,0 chr1 45266777 . G . PASS END=45266778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45266779 . G . PASS END=45266779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 45266780 . G . PASS END=45266780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45266781 . A . PASS END=45266782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:27,0 chr1 45266783 . G . PASS END=45266783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 45266784 . C . PASS END=45266786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 45266787 . A . PASS END=45266787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 45266788 . C . PASS END=45266788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,953:0,37,255:25,0 chr1 45266789 . A . PASS END=45266796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,963:0,67,255:26,0 chr1 45266797 . C . PASS END=45266797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:26,0 chr1 45266798 . A . PASS END=45266799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 45266800 . T . PASS END=45266800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 45266801 . T . PASS END=45266804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:25,0 chr1 45266805 . T . PASS END=45266805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:23,0 chr1 45266806 . G . PASS END=45266806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:23,0 chr1 45266807 . G . PASS END=45266808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:23,0 chr1 45266809 . G . PASS END=45266809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:22,0 chr1 45266810 . C . PASS END=45266811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,823:0,48,255:20,0 chr1 45266812 . C . PASS END=45266812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 45266813 . T . PASS END=45266813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,787:0,48,255:20,0 chr1 45266814 . G . PASS END=45266814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,906:0,34,255:20,0 chr1 45266815 . C . PASS END=45266816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,864:0,42,255:20,0 chr1 45266817 . G . PASS END=45266818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,892:0,61,255:21,0 chr1 45266819 . C . PASS END=45266824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:45:24:0,45,807:0,45,255:22,0 chr1 45267294 . T . PASS END=45267308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:19,0 chr1 45267309 . T . PASS END=45267312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45267313 . A . PASS END=45267313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 45267314 . G . PASS END=45267333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:25,0 chr1 45267334 . A . PASS END=45267340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 45267341 . A . PASS END=45267341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 45267342 . G . PASS END=45267351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1063:0,84,255:31,0 chr1 45267352 . A . PASS END=45267352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:31,0 chr1 45267353 . C . PASS END=45267387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:34,0 chr1 45267388 . A . PASS END=45267388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 45267389 . C . PASS END=45267398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr1 45267399 . A . PASS END=45267400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1084:0,66,255:30,0 chr1 45267401 . C . PASS END=45267401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1208:0,83,255:31,0 chr1 45267402 . T . PASS END=45267402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1116:0,30,255:30,0 chr1 45267403 . T . PASS END=45267403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1023:0,49,255:28,0 chr1 45267404 . G . PASS END=45267404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:29,0 chr1 45267405 . C . PASS END=45267405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1124:0,52,255:29,0 chr1 45267406 . A . PASS END=45267407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:63:32:0,63,1106:0,63,255:29,0 chr1 45267408 . C . PASS END=45267408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1052:0,41,255:29,0 chr1 45267409 . G . PASS END=45267411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:30,0 chr1 45267412 . A . PASS END=45267412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:27:32:0,27,1071:0,27,255:28,0 chr1 45267413 . C . PASS END=45267413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:28,0 chr1 45267414 . C . PASS END=45267415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:29,0 chr1 45267416 . C . PASS END=45267417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:27,0 chr1 45267418 . A . PASS END=45267418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1031:0,30,255:26,0 chr1 45267419 . G . PASS END=45267419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:27,0 chr1 45267420 . T . PASS END=45267420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1111:0,25,255:27,0 chr1 45267421 . T . PASS END=45267421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1047:0,35,255:28,0 chr1 45267422 . G . PASS END=45267423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1241:0,86,255:32,0 chr1 45267517 . G . PASS END=45267518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1429:0,117,255:39,0 chr1 45267519 . A . PASS END=45267604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:43:0,81,1405:0,81,255:40,0 chr1 45268432 . G . PASS END=45268449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:19,0 chr1 45268450 . C . PASS END=45268450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 45268451 . A . PASS END=45268451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 45268452 . A . PASS END=45268453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 45268454 . T . PASS END=45268454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 45268455 . A . PASS END=45268455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 45268456 . T . PASS END=45268456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 45268457 . G . PASS END=45268457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 45268458 . T . PASS END=45268458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:20,0 chr1 45268459 . G . PASS END=45268464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 45268465 . A . PASS END=45268465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 45268466 . G . PASS END=45268472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45268473 . T . PASS END=45268473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 45268474 . G . PASS END=45268475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 45268476 . T . PASS END=45268476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 45268477 . G . PASS END=45268479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45268480 . A . PASS END=45268480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,691:0,49,255:20,0 chr1 45268481 . C . PASS END=45268481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45268482 . A . PASS END=45268483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 45268484 . G . PASS END=45268487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45268488 . A . PASS END=45268491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,775:0,50,255:20,0 chr1 45268492 . C . PASS END=45268493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 45268494 . C . PASS END=45268495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 45268496 . G . PASS END=45268500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 45268501 . G . PASS END=45268515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:20:0,50,790:0,50,255:19,0 chr1 45268516 . G . PASS END=45268516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45268517 . G . PASS END=45268517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 45268518 . G . PASS END=45268520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45268521 . G . PASS END=45268521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,704:0,11,255:19,0 chr1 45268522 . T . PASS END=45268525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45268526 . A . PASS END=45268526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 45268527 . T . PASS END=45268527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45268627 . G . PASS END=45268630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 45268631 . A . PASS END=45268677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,854:0,61,255:26,0 chr1 45268678 . G . PASS END=45268678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45268679 . A . PASS END=45268694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 45268695 . A . PASS END=45268695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 45268696 . G . PASS END=45268702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 45268703 . C . PASS END=45268733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 45268734 . C . PASS END=45268735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 45268736 . G . PASS END=45268736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 45268737 . C . PASS END=45268741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 45268742 . C . PASS END=45268742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 45268743 . A . PASS END=45268743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 45268744 . G . PASS END=45268744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 45268745 . C . PASS END=45268748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 45268749 . T . PASS END=45268750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 45268751 . G . PASS END=45268756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45268757 . A . PASS END=45268758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 45268759 . C . PASS END=45268759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45268760 . C . PASS END=45268760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 45268761 . T . PASS END=45268761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45268762 . T . PASS END=45268762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 45268763 . C . PASS END=45268764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45268765 . G . PASS END=45268801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:19,0 chr1 45268802 . C . PASS END=45268802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45268803 . T . PASS END=45268803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 45268804 . G . PASS END=45268810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 45268811 . G . PASS END=45268812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 45268813 . C . PASS END=45268813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45268814 . T . PASS END=45268814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 45268815 . T . PASS END=45268825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 45268940 . G . PASS END=45268942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 45268943 . T . PASS END=45268943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 45268944 . A . PASS END=45268997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:17,0 chr1 45268998 . C . PASS END=45269045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,382:0,36,255:13,0 chr1 45269046 . T . PASS END=45269046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:9,0 chr1 45269047 . T . PASS END=45269056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 45269057 . A . PASS END=45269057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 45269058 . A . PASS END=45269063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 45269272 . G . PASS END=45269281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 45269282 . T . PASS END=45269282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 45269283 . G . PASS END=45269292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,903:0,62,255:26,0 chr1 45269293 . G . PASS END=45269298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 45269299 . A . PASS END=45269299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 45269300 . G . PASS END=45269301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 45269302 . T . PASS END=45269302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr1 45269303 . C . PASS END=45269303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 45269304 . T . PASS END=45269304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 45269305 . C . PASS END=45269316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,959:0,84,255:29,0 chr1 45269317 . G . PASS END=45269317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 45269318 . C . PASS END=45269320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 45269321 . C . PASS END=45269321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 45269322 . C . PASS END=45269324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 45269325 . A . PASS END=45269325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 45269326 . T . PASS END=45269329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 45269330 . C . PASS END=45269346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:27:0,71,1005:0,71,255:26,0 chr1 45269347 . A . PASS END=45269347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:24,0 chr1 45269348 . G . PASS END=45269363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:26,0 chr1 45269603 . G . PASS END=45269686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1133:0,80,255:40,0 chr1 45269687 . A . PASS END=45269687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1327:0,73,255:31,0 chr1 45269688 . G . PASS END=45269696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1211:0,88,255:33,0 chr1 45269835 . G . PASS END=45269861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,693:0,60,255:26,0 chr1 45269862 . C . PASS END=45269865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 45269866 . A . PASS END=45269866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 45269867 . G . PASS END=45269898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,989:0,90,255:30,0 chr1 45269899 . T . PASS END=45269899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 45269900 . A . PASS END=45269914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 45269915 . C . PASS END=45269918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 45270011 . C . PASS END=45270020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 45270021 . C . PASS END=45270064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,707:0,60,255:26,0 chr1 45270065 . A . PASS END=45270065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 45270066 . G . PASS END=45270113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 45270114 . C . PASS END=45270146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 45270147 . A . PASS END=45270147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 45270148 . C . PASS END=45270157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 45270158 . T . PASS END=45270158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 45270159 . G . PASS END=45270173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 45270322 . G . PASS END=45270431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1233:0,86,255:38,0 chr1 45270432 . T . PASS END=45270439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:23,0 chr1 45270440 . C . PASS END=45270444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:25:0,51,765:0,75,255:19,0 chr1 45270445 . C . PASS END=45270445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45270446 . A . PASS END=45270451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr1 45270938 . G . PASS END=45271024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1133:0,82,255:40,0 chr1 45271025 . A . PASS END=45271025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr1 45271026 . T . PASS END=45271051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,86,255:37,0 chr1 45271159 . G . PASS END=45271159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45271160 . T . LowGQ END=45271160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 45271161 . G . PASS END=45271161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 45271162 . A . PASS END=45271164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:14,0 chr1 45271165 . T . PASS END=45271176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:18,0 chr1 45271177 . C . PASS END=45271177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 45271178 . A . PASS END=45271182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 45271183 . A . PASS END=45271183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 45271184 . A . PASS END=45271198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,845:0,63,255:22,0 chr1 45271199 . G . PASS END=45271199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 45271200 . C . PASS END=45271269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,797:0,69,255:26,0 chr1 45271270 . C . PASS END=45271272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45271273 . C . PASS END=45271278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 45271279 . G . PASS END=45271288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 45271289 . C . PASS END=45271289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:14,0 chr1 45271290 . A . PASS END=45271304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:16,0 chr1 45271305 . A . PASS END=45271312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr1 45271313 . A . PASS END=45271314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 45271315 . G . PASS END=45271315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr1 45271316 . C . PASS END=45271341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 45271342 . C . PASS END=45271344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:10:0,15,225:0,30,255:5,0 chr1 45271345 . G . PASS END=45271350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:7,0 chr1 45271675 . T . PASS END=45271677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45271678 . C . PASS END=45271694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:17,0 chr1 45271695 . G . PASS END=45271695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,564:0,35,255:16,0 chr1 45271696 . G . PASS END=45271708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 45271709 . G . PASS END=45271709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 45271710 . C . PASS END=45271714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 45271715 . A . PASS END=45271718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 45271719 . A . PASS END=45271721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:53:19:0,53,810:0,53,255:21,0 chr1 45271722 . T . PASS END=45271724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45271725 . T . PASS END=45271725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 45271726 . G . PASS END=45271767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,901:0,65,255:25,0 chr1 45271768 . G . PASS END=45271780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:18:0,54,637:0,54,255:18,0 chr1 45271781 . A . PASS END=45271781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 45271782 . C . PASS END=45271790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 45271791 . C . PASS END=45271791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 45271792 . G . PASS END=45271811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 45271812 . C . PASS END=45271812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45271813 . C . PASS END=45271813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45271814 . A . PASS END=45271827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,690:0,44,255:19,0 chr1 45271828 . T C, 45.67 PASS DP=20;MQ=250.00;MQRankSum=3.566;ReadPosRankSum=0.792;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,7,0:0.350,0.000:20:7,3,0:6,4,0:45:80,0,50,213,456,669:181,0,255:12,0:4.5669e+01,1.3953e-04,5.3000e+01,2.1335e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,4,3:6,7,4,3 chr1 45271829 . A . PASS END=45271865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 45271866 . G . PASS END=45271877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 45271878 . G . PASS END=45271897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,63,255:23,0 chr1 45271898 . A . PASS END=45271898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 45271899 . G . PASS END=45271910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 45271911 . C . PASS END=45271911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 45271912 . G . PASS END=45271924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:26,0 chr1 45271925 . C . PASS END=45271926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45271927 . C . PASS END=45271935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 45271936 . C . PASS END=45271936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr1 45271937 . A . PASS END=45271939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1039:0,71,255:26,0 chr1 45271940 . C . PASS END=45271949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1057:0,87,255:29,0 chr1 45271950 . G . PASS END=45271950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 45271951 . C . PASS END=45271978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1286:0,89,255:34,0 chr1 45271979 . G . PASS END=45271979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 45271980 . C . PASS END=45272012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1208:0,83,255:33,0 chr1 45272013 . T . PASS END=45272016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 45272017 . G . PASS END=45272024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1224:0,83,255:30,0 chr1 45272025 . G . PASS END=45272025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 45272026 . C . PASS END=45272035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 45272036 . C . PASS END=45272036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 45272037 . G . PASS END=45272044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr1 45272045 . G . PASS END=45272045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 45272046 . C . PASS END=45272047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 45272048 . A . PASS END=45272048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 45272049 . G . PASS END=45272054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 45272055 . A . PASS END=45272055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 45272056 . C . PASS END=45272062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 45272063 . A . PASS END=45272071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 45272072 . C . PASS END=45272072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45272073 . T . PASS END=45272074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,992:0,68,255:26,0 chr1 45272075 . G . PASS END=45272078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45272079 . C . PASS END=45272085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45272086 . G . PASS END=45272087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45272088 . G . PASS END=45272088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 45272089 . C . PASS END=45272089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45272090 . A . PASS END=45272090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 45272091 . C . PASS END=45272091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45272092 . C . PASS END=45272112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,74,255:26,0 chr1 45272113 . A . PASS END=45272113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr1 45272114 . C . PASS END=45272117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 45272118 . C . PASS END=45272140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,566:0,48,255:18,0 chr1 45272141 . A . PASS END=45272141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 45272142 . G . PASS END=45272142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 45272143 . C . PASS END=45272143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 45272144 . G . PASS END=45272144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 45272145 . A . PASS END=45272156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,501:0,48,255:16,0 chr1 45272157 . A . PASS END=45272157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 45272158 . G . PASS END=45272158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 45272159 . A . PASS END=45272159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,474:0,9,255:14,0 chr1 45272160 . A . PASS END=45272160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 45272161 . G . PASS END=45272161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 45272162 . G . PASS END=45272163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 45272164 . C . PASS END=45272164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 45272165 . G . PASS END=45272167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 45272168 . G . PASS END=45272168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 45272169 . C . PASS END=45272170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 45272171 . A . PASS END=45272171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 45272172 . G . PASS END=45272200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:17,0 chr1 45272201 . G . PASS END=45272201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 45272202 . G . PASS END=45272207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr1 45272208 . G . PASS END=45272209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 45272210 . C . PASS END=45272210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 45272211 . C . PASS END=45272231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:25,0 chr1 45272232 . C . PASS END=45272351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1233:0,83,255:40,0 chr1 45272456 . C . PASS END=45272510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:91:43:0,91,1529:0,91,255:40,0 chr1 45272997 . C . PASS END=45273030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,862:0,72,255:26,0 chr1 45273031 . G . PASS END=45273031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45273032 . T . PASS END=45273044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 45273045 . G . PASS END=45273091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:35,0 chr1 45273092 . T . PASS END=45273108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:27:0,69,1035:0,81,255:26,0 chr1 45274493 . A . PASS END=45274493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,843:0,48,255:26,0 chr1 45274494 . T . PASS END=45274494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,852:0,15,255:23,0 chr1 45274495 . G . PASS END=45274496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,968:0,70,255:25,0 chr1 45274497 . A . PASS END=45274497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:27,0 chr1 45274498 . G . PASS END=45274498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 45274499 . C . PASS END=45274501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 45274502 . T . PASS END=45274505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:43:30:0,43,964:0,43,255:28,0 chr1 45274506 . G . PASS END=45274507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 45274508 . C . PASS END=45274508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 45274509 . T . PASS END=45274509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 45274510 . G . PASS END=45274510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:29,0 chr1 45274511 . G . PASS END=45274512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 45274513 . C . PASS END=45274513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 45274514 . G . PASS END=45274515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1047:0,52,255:29,0 chr1 45274516 . G . PASS END=45274516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1014:0,35,255:28,0 chr1 45274517 . C . PASS END=45274517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:30,0 chr1 45274518 . A . PASS END=45274523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,978:0,48,255:29,0 chr1 45274524 . A . PASS END=45274525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1086:0,62,255:29,0 chr1 45274526 . G . PASS END=45274526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1019:0,54,255:29,0 chr1 45274527 . C . PASS END=45274527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 45274528 . T . PASS END=45274528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 45274529 . G . PASS END=45274529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,0 chr1 45274530 . A . PASS END=45274530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:30,0 chr1 45274531 . A . PASS END=45274531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:28,0 chr1 45274532 . C . PASS END=45274535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1156:0,83,255:30,0 chr1 45274536 . T . PASS END=45274536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:29,0 chr1 45274537 . T . PASS END=45274537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:29,0 chr1 45274538 . T . PASS END=45274538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr1 45274539 . C . PASS END=45274540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 45274541 . G . PASS END=45274541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:29,0 chr1 45274542 . C . PASS END=45274543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1131:0,80,255:27,0 chr1 45274544 . G . PASS END=45274544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:26,0 chr1 45274545 . C . PASS END=45274547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:28,0 chr1 45274548 . T . PASS END=45274548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:26,0 chr1 45274549 . C . PASS END=45274552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:27,0 chr1 45274553 . A . PASS END=45274555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 45274556 . C . PASS END=45274557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 45274558 . T . PASS END=45274559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45274560 . T . PASS END=45274563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45274564 . C . PASS END=45274568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 45274569 . C . PASS END=45274569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45274570 . G . PASS END=45274570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,950:0,48,255:27,0 chr1 45274571 . C . PASS END=45274573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45274574 . T . PASS END=45274575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:25,0 chr1 45274576 . C . PASS END=45274578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 45275885 . T . PASS END=45275885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45275886 . G . PASS END=45275891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 45275892 . T . PASS END=45275892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 45275893 . G . PASS END=45275990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,974:0,81,255:35,0 chr1 45275991 . G . PASS END=45275991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 45275992 . G . PASS END=45275999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 45276000 . G . PASS END=45276014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:24,0 chr1 45276015 . G . PASS END=45276016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 45276017 . G . PASS END=45276019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 45276020 . A . PASS END=45276032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 45276033 . A . PASS END=45276045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:22,0 chr1 45276046 . T . PASS END=45276046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 45276047 . G . PASS END=45276048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45276049 . C . PASS END=45276050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45276051 . G . PASS END=45276080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 45276081 . A . PASS END=45276099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 45276100 . T . PASS END=45276100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 45276101 . G . PASS END=45276126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:16:0,40,568:0,40,255:19,0 chr1 45276127 . G . PASS END=45276128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 45276129 . A . PASS END=45276131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 45276132 . G . PASS END=45276146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 45276147 . A . PASS END=45276147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 45276148 . G . PASS END=45276155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45276156 . T . PASS END=45276157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,65,255:19,0 chr1 45276158 . T . PASS END=45276211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,900:0,63,255:26,0 chr1 45276212 . C . PASS END=45276214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45276215 . C . PASS END=45276217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 45276218 . C . PASS END=45276389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:34:0,89,1225:0,89,255:40,0 chr1 45276390 . G . PASS END=45276394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:33:0,82,1105:0,82,255:30,0 chr1 45276395 . G . PASS END=45276411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,795:0,60,255:26,0 chr1 45276412 . A . PASS END=45276412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 45276413 . A . PASS END=45276413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 45277711 . C . PASS END=45277715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 45277716 . C . PASS END=45277716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1353:0,73,255:39,0 chr1 45277717 . C . PASS END=45277770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:43:0,97,1171:0,97,255:40,0 chr1 45278668 . G . PASS END=45278673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 45278674 . G . LowGQ END=45278675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 45278676 . A . PASS END=45278693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr1 45278694 . G . PASS END=45278727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,243:8,0 chr1 45278728 . C . PASS END=45278731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 45278732 . G . PASS END=45278734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 45278735 . A . PASS END=45278736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 45278810 . G . PASS END=45278840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr1 45278841 . T . PASS END=45278841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 45278842 . G . PASS END=45278901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,590:0,48,255:19,0 chr1 45278902 . A . PASS END=45278902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,627:0,27,255:12,0 chr1 45278903 . C . PASS END=45278906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 45278907 . T . PASS END=45278913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 45278914 . G . PASS END=45278914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 45278915 . G . PASS END=45278941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 45279046 . G . PASS END=45279047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,845:0,69,255:23,0 chr1 45279048 . G . PASS END=45279048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 45279049 . G . PASS END=45279052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 45279053 . T . PASS END=45279053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 45279054 . G . PASS END=45279054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45279055 . G . PASS END=45279055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 45279056 . A . PASS END=45279065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr1 45279066 . G . PASS END=45279066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 45279067 . G . PASS END=45279081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:32,0 chr1 45279082 . C . PASS END=45279082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1025:0,63,255:29,0 chr1 45279083 . C . PASS END=45279144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1241:0,84,255:37,0 chr1 45279145 . C . PASS END=45279145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:34,0 chr1 45279146 . A . PASS END=45279177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:34,0 chr1 45279178 . A . PASS END=45279192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 45279193 . C . PASS END=45279198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 45279199 . C . PASS END=45279199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 45279200 . C . PASS END=45279200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45279201 . A . PASS END=45279201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 45279202 . C . PASS END=45279212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:19,0 chr1 45279310 . G . PASS END=45279319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 45279320 . T . PASS END=45279324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45279325 . G . PASS END=45279325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45279326 . A . PASS END=45279340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 45279341 . A . PASS END=45279342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 45279343 . G . PASS END=45279349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 45279350 . G . PASS END=45279353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 45279354 . A . PASS END=45279374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr1 45279375 . C . PASS END=45279375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 45279376 . C . PASS END=45279389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 45279390 . G . PASS END=45279392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45279393 . A . PASS END=45279393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 45279394 . G . PASS END=45279401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 45279402 . G . PASS END=45279407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45279408 . G . PASS END=45279411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 45279412 . C . PASS END=45279418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 45279419 . G . PASS END=45279421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 45279422 . T . PASS END=45279443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:18,0 chr1 45279444 . A . PASS END=45279444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 45279445 . T . PASS END=45279478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,637:0,43,255:19,0 chr1 45279479 . G . PASS END=45279481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 45279482 . C . PASS END=45279482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 45279483 . A . PASS END=45279492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,821:0,66,255:22,0 chr1 45279493 . G . PASS END=45279499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:21:0,52,754:0,52,255:20,0 chr1 45279500 . A . PASS END=45279501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45279502 . T . PASS END=45279502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45279503 . A . PASS END=45279507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 45279508 . T . PASS END=45279509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 45279510 . C . PASS END=45279518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 45279519 . T . PASS END=45279520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 45279521 . G . PASS END=45279538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 45279539 . C . PASS END=45279539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr1 45279540 . C . PASS END=45279541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45279542 . T . PASS END=45279542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 45279543 . T . PASS END=45279545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45279546 . C . PASS END=45279546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 45279547 . A . PASS END=45279550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr1 45279551 . T . PASS END=45279552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45279553 . C . PASS END=45279557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 45279558 . T . PASS END=45279558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 45279559 . G . PASS END=45279573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 45279574 . A . PASS END=45279591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 45279592 . G . PASS END=45279595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 45279596 . A . PASS END=45279607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 45279608 . G . PASS END=45279609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 45279610 . G . PASS END=45279611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 45279612 . T . PASS END=45279618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 45279619 . C . PASS END=45279620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45279621 . T . PASS END=45279628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45279629 . A . PASS END=45279639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 45279640 . G . PASS END=45279642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 45279643 . C . PASS END=45279644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45279645 . G . PASS END=45279645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 45279646 . G . PASS END=45279646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45279647 . C . PASS END=45279647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 45279648 . A . PASS END=45279649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 45279650 . G . PASS END=45279650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 45279651 . G . PASS END=45279655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 45279656 . G . PASS END=45279656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 45279657 . G . PASS END=45279657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 45279658 . C . PASS END=45279658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr1 45279659 . T . PASS END=45279665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:11,0 chr1 45279666 . C . PASS END=45279672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45279673 . G . PASS END=45279673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 45279674 . G . PASS END=45279676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45279677 . T . PASS END=45279677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 45279678 . G . PASS END=45279678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 45279679 . A . PASS END=45279679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 45286361 . C . PASS END=45286376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,894:0,64,255:25,0 chr1 45287514 . C . PASS END=45287576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:45:0,119,1426:0,119,255:40,0 chr1 45288087 . T . PASS END=45288129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 45288130 . G . PASS END=45288134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:11,0 chr1 45288135 . A . PASS END=45288135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 45288136 . G . PASS END=45288138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 45288139 . G . PASS END=45288139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 45288140 . C . PASS END=45288148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 45288149 . A . PASS END=45288149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr1 45288150 . C . PASS END=45288150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 45288151 . C . PASS END=45288152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 45288153 . A . PASS END=45288153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 45288154 . G . PASS END=45288157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 45288158 . G . PASS END=45288158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:12,0 chr1 45288159 . C . PASS END=45288159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45288160 . T . PASS END=45288160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 45288161 . C . PASS END=45288161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45288162 . A . PASS END=45288162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 45288163 . T . PASS END=45288174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 45288175 . T . LowGQ END=45288175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,343:22,0,255:9,0 chr1 45288176 . G . PASS END=45288178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 45288179 . T . PASS END=45288179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 45288180 . G . PASS END=45288183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 45288184 . G . PASS END=45288184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 45288185 . C . PASS END=45288189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 45288190 . G . PASS END=45288190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 45288191 . G . PASS END=45288191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 45288192 . C . PASS END=45288219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:12,0 chr1 45288220 . A . PASS END=45288220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:11,0 chr1 45288221 . T . PASS END=45288237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 45288238 . G . PASS END=45288241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 45288242 . A . PASS END=45288242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:12,0 chr1 45288243 . G . PASS END=45288243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 45288244 . C . PASS END=45288255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 45288256 . G . PASS END=45288267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 45288268 . C . PASS END=45288271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45288272 . A . PASS END=45288278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 45288279 . C . PASS END=45288279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 45288280 . C . PASS END=45288281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 45288282 . G . PASS END=45288282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 45288283 . C . PASS END=45288284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45288285 . T . PASS END=45288296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 45288297 . T . PASS END=45288297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 45288298 . G . PASS END=45288310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 45288311 . T . PASS END=45288311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,319:0,6,255:10,0 chr1 45288312 . C . PASS END=45288312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 45288313 . T . PASS END=45288313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr1 45288314 . C . PASS END=45288321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 45288322 . T . PASS END=45288322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 45288323 . C . PASS END=45288324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 45288325 . T . PASS END=45288335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 45288336 . T . PASS END=45288336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 45288337 . A . PASS END=45288341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 45288736 . G . PASS END=45288736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 45288741 . C . PASS END=45288748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 45288749 . G . PASS END=45288749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 45288750 . C . PASS END=45288752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 45288753 . G . PASS END=45288797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:32,0 chr1 45288798 . G . PASS END=45288798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:29,0 chr1 45288799 . A . PASS END=45288812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:31,0 chr1 45288813 . G . PASS END=45288813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 45288814 . A . PASS END=45288821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 45288822 . C . PASS END=45288826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 45288827 . C . PASS END=45288828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 45288829 . G . PASS END=45288838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:26,0 chr1 45288839 . A . PASS END=45288840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 45288843 . A . PASS END=45288843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 45288911 . C . PASS END=45288911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 45288915 . C . PASS END=45288928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,713:0,60,255:21,0 chr1 45288929 . A . PASS END=45288929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 45288930 . A . PASS END=45288934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45288935 . G . PASS END=45288939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 45288940 . C . PASS END=45288976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 45288977 . C . PASS END=45288978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 45288979 . C . PASS END=45289009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 45289010 . G . PASS END=45289010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 45289011 . G . PASS END=45289034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 45289035 . C . PASS END=45289035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45289036 . T . PASS END=45289042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 45289043 . G . PASS END=45289043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 45289044 . G . PASS END=45289048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45289049 . C . PASS END=45289057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:17,0 chr1 45291922 . C . PASS END=45291924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 45291925 . A . PASS END=45291925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,813:0,33,255:23,0 chr1 45291926 . G . PASS END=45291927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 45291928 . C . PASS END=45291928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 45291929 . A . PASS END=45291931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,914:0,72,255:24,0 chr1 45291932 . T . PASS END=45291932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:21,0 chr1 45291933 . G . PASS END=45291934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 45291935 . A . PASS END=45291935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 45291936 . C . PASS END=45291946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 45291947 . A . PASS END=45291947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr1 45291948 . C . PASS END=45291949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:26,0 chr1 45291950 . C . PASS END=45291965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,958:0,81,255:34,0 chr1 45291966 . C . PASS END=45291966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:32,0 chr1 45291967 . C . PASS END=45291967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1318:0,102,255:34,0 chr1 45291968 . A . PASS END=45291968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1150:0,71,255:32,0 chr1 45291969 . C . PASS END=45291986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1274:0,91,255:36,0 chr1 45291987 . T . PASS END=45291987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:35,0 chr1 45291988 . G . PASS END=45292059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1227:0,88,255:37,0 chr1 45292158 . A . PASS END=45292158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 45292160 . T . PASS END=45292254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1141:0,83,255:35,0 chr1 45292255 . G . PASS END=45292255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 45292256 . C . PASS END=45292267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 45292268 . C . PASS END=45292276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 45292277 . G . PASS END=45292297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:31,0 chr1 45292298 . G . PASS END=45292304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:24,0 chr1 45292305 . G . PASS END=45292309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:28:0,54,810:0,84,255:19,0 chr1 45292310 . C . PASS END=45292314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:20,0 chr1 45292315 . C . PASS END=45292350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 45292351 . C . PASS END=45292351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 45292352 . C . PASS END=45292360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:18,0 chr1 45292361 . C . PASS END=45292361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 45292362 . T . PASS END=45292363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 45292364 . C . PASS END=45292365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 45292366 . C . PASS END=45292367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:16,0 chr1 45292368 . A . PASS END=45292368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:12,0 chr1 45292369 . A . PASS END=45292373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 45292374 . G . PASS END=45292374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 45292375 . C . PASS END=45292375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 45292376 . A . PASS END=45292376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr1 45292377 . G . PASS END=45292378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:16,0 chr1 45292379 . C . PASS END=45292379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr1 45292380 . T . PASS END=45292380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 45292381 . T . PASS END=45292381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 45292382 . C . PASS END=45292382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 45292383 . T . PASS END=45292383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 45292384 . G . PASS END=45292384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr1 45292385 . G . PASS END=45292387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 45292388 . G . PASS END=45292390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 45292391 . A . PASS END=45292391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 45292392 . C . PASS END=45292392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 45292393 . G . PASS END=45292393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 45292394 . C . PASS END=45292394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 45292395 . A . PASS END=45292396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 45292397 . C . PASS END=45292397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 45292398 . A . PASS END=45292398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 45292399 . G . PASS END=45292399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,526:0,4,255:14,0 chr1 45292400 . G . PASS END=45292400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 45292401 . A . PASS END=45292405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 45292406 . G . PASS END=45292406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr1 45292407 . A . PASS END=45292407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 45292408 . A . PASS END=45292409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 45292410 . T . PASS END=45292415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 45292416 . A . PASS END=45292424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,495:0,31,255:12,0 chr1 45292425 . G . PASS END=45292425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr1 45292426 . G . PASS END=45292427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:11,0 chr1 45292428 . T . PASS END=45292433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,360:0,20,255:9,0 chr1 45292434 . G . PASS END=45292434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 45292435 . G . PASS END=45292438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:8,0 chr1 45292439 . G . PASS END=45292440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 45292574 . T . PASS END=45292580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,732:0,66,255:23,0 chr1 45292581 . G . PASS END=45292581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 45292582 . T . PASS END=45292594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,785:0,69,255:25,0 chr1 45292595 . T . PASS END=45292595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:24,0 chr1 45292596 . G . PASS END=45292616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,893:0,62,255:26,0 chr1 45292617 . T . PASS END=45292625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:29,0 chr1 45292626 . T . PASS END=45292626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 45292627 . G . PASS END=45292635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1200:0,83,255:30,0 chr1 45292636 . A . PASS END=45292636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:27,0 chr1 45292637 . A . PASS END=45292640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1176:0,83,255:29,0 chr1 45292641 . G . PASS END=45292641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr1 45292642 . G . PASS END=45292644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 45292645 . T . PASS END=45292645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 45292646 . G . PASS END=45292701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1033:0,80,255:33,0 chr1 45292702 . A . PASS END=45292702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:25,0 chr1 45292703 . A . PASS END=45292704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45292705 . A . PASS END=45292754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:26,0 chr1 45292839 . C . PASS END=45292846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 45292847 . A . PASS END=45292847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 45292848 . A . PASS END=45292863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,782:0,50,255:19,0 chr1 45292864 . G . PASS END=45292865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45292866 . G A, 47.39 PASS DP=22;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=0.543;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,8,0:0.381,0.000:21:7,3,0:6,5,0:46:82,0,50,278,457,735:239,0,255:13,0:4.7391e+01,1.0096e-04,5.3000e+01,2.7813e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,3,5:8,5,4,4 chr1 45292867 . T . PASS END=45292871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45292872 . A . PASS END=45292872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 45292873 . G . PASS END=45292881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 45292882 . A . PASS END=45292882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 45292883 . G . PASS END=45292892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr1 45292893 . G . PASS END=45292896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45292897 . A . PASS END=45292897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:26,0 chr1 45292898 . G . PASS END=45292903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 45292904 . C . PASS END=45292912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1011:0,81,255:30,0 chr1 45292913 . A . PASS END=45292913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr1 45292914 . G . PASS END=45292926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1028:0,87,255:31,0 chr1 45292927 . G . PASS END=45292927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:30,0 chr1 45292928 . A . PASS END=45292932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1125:0,93,255:31,0 chr1 45292933 . C . PASS END=45292933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 45292934 . G . PASS END=45292938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 45292939 . A . PASS END=45292939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1068:0,77,255:27,0 chr1 45292940 . T . PASS END=45292941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45292942 . C . PASS END=45292942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:25,0 chr1 45292943 . G . PASS END=45292948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:27,0 chr1 45292949 . A . PASS END=45292960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:25,0 chr1 45292961 . G . PASS END=45292961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr1 45292962 . G . PASS END=45292981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,909:0,64,255:26,0 chr1 45293065 . G . PASS END=45293065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 45293074 . C . PASS END=45293074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 45293075 . C . PASS END=45293085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 45293086 . T . PASS END=45293094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 45293095 . A . PASS END=45293112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 45293113 . G . PASS END=45293126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 45293127 . G . PASS END=45293127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 45293128 . G . PASS END=45293141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 45293142 . G . PASS END=45293142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 45293143 . C . PASS END=45293208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,576:0,41,255:19,0 chr1 45293209 . C . PASS END=45293245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:24,0 chr1 45293246 . G . PASS END=45293246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 45293247 . T . PASS END=45293247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 45293248 . A . PASS END=45293248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:21,0 chr1 45293249 . C . PASS END=45293251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 45293252 . G . PASS END=45293252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr1 45293253 . A . PASS END=45293317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,854:0,72,255:25,0 chr1 45293318 . G . PASS END=45293318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 45293319 . T . PASS END=45293326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,670:0,74,255:25,0 chr1 45293327 . C . PASS END=45293327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 45293328 . A . PASS END=45293347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 45293348 . C . PASS END=45293349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 45293350 . G . PASS END=45293355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 45293356 . G . PASS END=45293386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 45293515 . C . PASS END=45293515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 45293516 . T . PASS END=45293516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,965:0,76,255:30,0 chr1 45293517 . T . PASS END=45293517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 45293518 . A G, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.521;ReadPosRankSum=2.291;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,20,0:0.645,0.000:31:5,9,0:6,11,0:45:85,0,44,715,357,1072:255,0,255:11,0:5.0000e+01,1.3228e-04,4.6897e+01,4.5000e+02,3.9134e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,10,10:3,8,11,9 chr1 45293519 . G . PASS END=45293533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 45293534 . A . PASS END=45293534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 45293535 . G . PASS END=45293537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 45293538 . A . PASS END=45293538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 45293539 . C . PASS END=45293539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45293540 . G . PASS END=45293541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 45293542 . G . PASS END=45293546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45293547 . A . PASS END=45293547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,869:0,73,255:29,0 chr1 45293548 . C . PASS END=45293550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:31,0 chr1 45293551 . A . PASS END=45293551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 45293552 . T . PASS END=45293553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 45293554 . G . PASS END=45293554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 45293555 . C . PASS END=45293555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 45293556 . G . PASS END=45293563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 45293564 . T . PASS END=45293564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 45293565 . G . PASS END=45293578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr1 45293579 . C . PASS END=45293581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 45293582 . G . PASS END=45293628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1103:0,84,255:30,0 chr1 45293629 . C . PASS END=45293646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:24,0 chr1 45293647 . T . PASS END=45293651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,798:0,50,255:20,0 chr1 45293652 . A . PASS END=45293652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:17,0 chr1 45293653 . C . PASS END=45293654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 45293655 . C . PASS END=45293657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45293658 . C . PASS END=45293659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 45293660 . G . PASS END=45293684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,760:0,63,255:22,0 chr1 45293685 . G . PASS END=45293685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 45293686 . G . PASS END=45293707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 45293708 . T . PASS END=45293708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 45293709 . G . PASS END=45293722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 45293723 . A . PASS END=45293723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 45293724 . G . PASS END=45293736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 45293737 . A . PASS END=45293737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 45293738 . T . PASS END=45293780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:23,0 chr1 45293781 . C . PASS END=45293781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 45293782 . A . PASS END=45293789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 45293790 . G . PASS END=45293806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 45293807 . A . PASS END=45293808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 45293809 . T . PASS END=45293825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,705:0,57,255:19,0 chr1 45293826 . C . PASS END=45293833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 45293834 . A . PASS END=45293855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr1 45293856 . A . PASS END=45293857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45293858 . C . PASS END=45293863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 45293968 . C . PASS END=45293986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,945:0,75,255:26,0 chr1 45293987 . C . PASS END=45293990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45293991 . A . PASS END=45293994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 45293995 . C . PASS END=45294050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1033:0,87,255:32,0 chr1 45294051 . C . PASS END=45294055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45294056 . C . PASS END=45294061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 45294062 . A . PASS END=45294063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,962:0,68,255:26,0 chr1 45294064 . G . PASS END=45294065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45294066 . G . PASS END=45294086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 45294178 . C . PASS END=45294178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45294179 . T . PASS END=45294179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 45294180 . G . PASS END=45294180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45294181 . T . PASS END=45294189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 45294190 . G . PASS END=45294193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:21,0 chr1 45294194 . C . PASS END=45294195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 45294196 . C . PASS END=45294197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 45294198 . G . PASS END=45294233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 45294234 . C . PASS END=45294234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:22,0 chr1 45294235 . G . PASS END=45294238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,914:0,72,255:25,0 chr1 45294239 . A . PASS END=45294239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 45294240 . T . PASS END=45294283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 45294284 . A . PASS END=45294303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,613:0,41,255:18,0 chr1 45294306 . G . PASS END=45294306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 45294654 . C . PASS END=45294654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45294655 . T . PASS END=45294655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 45294656 . G . PASS END=45294662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 45294663 . G . PASS END=45294663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 45294664 . G . PASS END=45294670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1070:0,87,255:31,0 chr1 45294671 . G . PASS END=45294673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 45294674 . G . PASS END=45294677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 45294678 . C . PASS END=45294679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:25,0 chr1 45294680 . C . PASS END=45294689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1178:0,83,255:31,0 chr1 45294690 . A . PASS END=45294690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 45294691 . T . PASS END=45294696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 45294697 . A . PASS END=45294697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 45294698 . G . PASS END=45294698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 45294699 . C . PASS END=45294699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 45294700 . A . PASS END=45294702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:32:0,92,1310:0,92,255:34,0 chr1 45294703 . A . PASS END=45294704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1213:0,61,255:34,0 chr1 45294705 . T . PASS END=45294705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1268:0,80,255:32,0 chr1 45294706 . A . PASS END=45294706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:32,0 chr1 45294707 . C . PASS END=45294708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1343:0,81,255:32,0 chr1 45294709 . T . PASS END=45294711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:31,0 chr1 45294712 . T . PASS END=45294712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 45294713 . C . PASS END=45294714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr1 45294715 . A . PASS END=45294715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 45294716 . C . PASS END=45294717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr1 45294718 . C . PASS END=45294718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:29,0 chr1 45294719 . C . PASS END=45294719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr1 45294720 . G . PASS END=45294723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:29,0 chr1 45294724 . C . PASS END=45294724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 45294725 . C . PASS END=45294725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1024:0,16,255:28,0 chr1 45294726 . C . PASS END=45294727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1027:0,62,255:27,0 chr1 45294728 . G . PASS END=45294736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 45294737 . A . PASS END=45294738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 45294739 . G . PASS END=45294746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 45294825 . G . PASS END=45294825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 45294829 . C . PASS END=45294831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1047:0,71,255:26,0 chr1 45294832 . G . PASS END=45294835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 45294836 . G . PASS END=45294836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45294837 . T . PASS END=45294839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45294840 . C . PASS END=45294853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,939:0,71,255:26,0 chr1 45294854 . A . PASS END=45294863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 45294864 . G . PASS END=45294866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1061:0,71,255:27,0 chr1 45294867 . C . PASS END=45294876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 45294877 . A . PASS END=45294911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 45294912 . C . PASS END=45294918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 45294919 . A . PASS END=45294955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,786:0,61,255:24,0 chr1 45294956 . C . PASS END=45294962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 45294963 . T . PASS END=45294969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 45294970 . A . PASS END=45294970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45294971 . C . PASS END=45294984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 45295074 . C . PASS END=45295078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45295079 . G . PASS END=45295079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 45295080 . C . PASS END=45295093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,922:0,69,255:24,0 chr1 45295094 . C . PASS END=45295094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 45295095 . C . PASS END=45295095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 45295096 . A . PASS END=45295096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 45295097 . C . PASS END=45295097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 45295098 . A . PASS END=45295099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:23,0 chr1 45295100 . G . PASS END=45295107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 45295108 . C . PASS END=45295108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 45295109 . T . PASS END=45295114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 45295115 . C . PASS END=45295115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 45295116 . A . PASS END=45295117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 45295118 . A . PASS END=45295118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 45295119 . G . PASS END=45295140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:24,0 chr1 45295141 . A . PASS END=45295141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 45295142 . G . PASS END=45295144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45295145 . T . PASS END=45295145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:18,0 chr1 45295146 . G . PASS END=45295147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45295148 . T . PASS END=45295148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45295149 . G . PASS END=45295149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45295150 . G . PASS END=45295177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 45295178 . C . PASS END=45295182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 45295183 . T . PASS END=45295184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 45295185 . A . PASS END=45295186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,845:0,69,255:23,0 chr1 45295187 . G . PASS END=45295187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 45295188 . C . PASS END=45295190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 45295191 . G . PASS END=45295191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 45295192 . G . PASS END=45295205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 45295281 . C . PASS END=45295281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:22,0 chr1 45295286 . C . PASS END=45295291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:25,0 chr1 45295292 . A . PASS END=45295292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 45295293 . A . PASS END=45295307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,840:0,75,255:26,0 chr1 45295308 . G . PASS END=45295308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45295309 . C . PASS END=45295309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:25,0 chr1 45295310 . T . PASS END=45295316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 45295317 . A . PASS END=45295319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 45295320 . G . PASS END=45295330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1260:0,90,255:29,0 chr1 45295331 . C . PASS END=45295331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 45295332 . T . PASS END=45295333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 45295334 . C . PASS END=45295334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 45295335 . T . PASS END=45295352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1125:0,93,255:31,0 chr1 45295353 . T . PASS END=45295353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 45295354 . G . PASS END=45295397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:32,0 chr1 45295398 . C . PASS END=45295399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 45295400 . C . PASS END=45295401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45295402 . T . PASS END=45295428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,62,255:26,0 chr1 45295429 . C . PASS END=45295433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 45295581 . C . PASS END=45295590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr1 45295591 . C . PASS END=45295601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45295602 . T . PASS END=45295670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr1 45295671 . C . PASS END=45295693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,32,255:13,0 chr1 45295694 . A . PASS END=45295701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 45295702 . C . PASS END=45295702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 45296520 . C . PASS END=45296522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 45296523 . C . PASS END=45296523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 45296524 . C . PASS END=45296547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 45296548 . G . PASS END=45296549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 45296550 . T . PASS END=45296560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45296561 . G . PASS END=45296587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 45296588 . C . PASS END=45296590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45296591 . C . PASS END=45296594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 45296595 . G . PASS END=45296595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45296596 . G . PASS END=45296603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 45296604 . C . PASS END=45296634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:26,0 chr1 45296635 . C . PASS END=45296646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 45296647 . G . PASS END=45296647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr1 45296648 . C . PASS END=45296668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,985:0,84,255:31,0 chr1 45296669 . G . PASS END=45296669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 45296670 . C . PASS END=45296684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1132:0,93,255:31,0 chr1 45296685 . C . PASS END=45296685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:30,0 chr1 45296686 . A . PASS END=45296696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1141:0,93,255:31,0 chr1 45296697 . C . PASS END=45296715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 45296721 . G . PASS END=45296721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45297378 . G . PASS END=45297391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 45297392 . G . PASS END=45297394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 45297395 . C . PASS END=45297440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,83,255:33,0 chr1 45297441 . A . PASS END=45297469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,878:0,65,255:26,0 chr1 45297647 . C . PASS END=45297650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1143:0,96,255:32,0 chr1 45297651 . T . PASS END=45297651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 45297652 . C . PASS END=45297654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 45297655 . T . PASS END=45297655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:26:32:0,26,995:0,26,255:29,0 chr1 45297656 . C . PASS END=45297662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:31,0 chr1 45297663 . T . PASS END=45297663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:29,0 chr1 45297664 . T . PASS END=45297704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:31:0,91,1132:0,91,255:37,0 chr1 45297705 . A . PASS END=45297705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:34,0 chr1 45297706 . A . PASS END=45297714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1235:0,91,255:33,0 chr1 45297715 . A . PASS END=45297715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:29,0 chr1 45297716 . C . PASS END=45297716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 45297824 . T . PASS END=45297828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 45297829 . A . PASS END=45297829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:29,0 chr1 45297830 . T . PASS END=45297847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:31:0,86,1195:0,86,255:35,0 chr1 45297848 . T . PASS END=45297848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1149:0,58,255:33,0 chr1 45297849 . T . PASS END=45297850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1266:0,105,255:35,0 chr1 45297851 . C . PASS END=45297851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:34,0 chr1 45297852 . T . PASS END=45297927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1235:0,86,255:36,0 chr1 45297928 . C . PASS END=45297936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,99,255:26,0 chr1 45297937 . C . PASS END=45297941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1163:0,90,255:30,0 chr1 45297942 . G . PASS END=45297942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 45297943 . A . PASS END=45297958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1155:0,80,255:30,0 chr1 45297959 . T . PASS END=45297962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45297963 . C . PASS END=45297971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1124:0,87,255:29,0 chr1 45297972 . T . PASS END=45298000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,853:0,65,255:25,0 chr1 45298001 . A . PASS END=45298013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr1 45307519 . C . PASS END=45307533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 45307534 . G . PASS END=45307538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:29,0 chr1 45307539 . A . PASS END=45307539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:27,0 chr1 45307540 . A . PASS END=45307541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 45307542 . T . PASS END=45307542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,881:0,48,255:28,0 chr1 45307543 . T . PASS END=45307543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 45307544 . T . PASS END=45307555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,973:0,87,255:29,0 chr1 45307556 . G . PASS END=45307556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 45307557 . G . PASS END=45307676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1080:0,83,255:40,0 chr1 45307677 . A . PASS END=45307705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 45307706 . T . PASS END=45307711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,59,255:18,0 chr1 45308533 . C . PASS END=45308533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45308534 . T . PASS END=45308534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:13,0 chr1 45308535 . G . PASS END=45308548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,458:0,42,255:14,0 chr1 45308549 . C . PASS END=45308565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 45308566 . A . PASS END=45308574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 45308575 . C . PASS END=45308575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45308576 . A . PASS END=45308576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 45308577 . G . PASS END=45308581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:12:0,22,360:0,22,255:9,0 chr1 45308582 . C . PASS END=45308582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:8,0 chr1 45308583 . T . PASS END=45308589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:23:9:0,23,349:0,23,255:9,0 chr1 45308590 . C . PASS END=45308590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 45308591 . G . PASS END=45308591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 45308592 . G . PASS END=45308595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 45308596 . T . LowGQ END=45308596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:3,0,255:8,0 chr1 45308597 . C . PASS END=45308598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:13:10:0,13,280:0,13,255:10,0 chr1 45308599 . A . LowGQ END=45308599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,241:14,0,255:9,0 chr1 45308600 . G . PASS END=45308601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 45308602 . C . PASS END=45308602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,336:0,33,255:11,0 chr1 45308603 . A . PASS END=45308604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 45316341 . C . PASS END=45316341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 45316357 . G . PASS END=45316357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 45316422 . G . PASS END=45316422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 45316623 . T . PASS END=45316675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:40:0,108,1574:0,113,255:40,0 chr1 45323376 . C . PASS END=45323479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:38:0,88,1313:0,88,255:40,0 chr1 45328662 . T . PASS END=45328665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 45328666 . G . PASS END=45328666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 45328667 . C . PASS END=45328670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 45328671 . G . PASS END=45328674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:24,0 chr1 45328675 . A . PASS END=45328675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 45328676 . C . PASS END=45328676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 45328677 . A . PASS END=45328677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 45328678 . G . PASS END=45328833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:31:0,80,1097:0,80,255:40,0 chr1 45340313 . T . PASS END=45340314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 45340315 . A . PASS END=45340315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 45340316 . T . PASS END=45340316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 45340317 . C . PASS END=45340317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 45340318 . T . PASS END=45340319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:27,0 chr1 45340320 . T . PASS END=45340465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:28:0,84,1055:0,84,255:40,0 chr1 45340466 . T . PASS END=45340466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1360:0,79,255:35,0 chr1 45340467 . G . PASS END=45340467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:36,0 chr1 45340468 . T . PASS END=45340468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1350:0,79,255:36,0 chr1 45340469 . C . PASS END=45340476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1413:0,81,255:34,0 chr1 45340477 . C . PASS END=45340477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:32,0 chr1 45340478 . A . PASS END=45340481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:38:0,84,1287:0,84,255:32,0 chr1 45340482 . A . PASS END=45340482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:31,0 chr1 45340483 . G . PASS END=45340485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1254:0,80,255:30,0 chr1 45340486 . T . PASS END=45340486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1190:0,64,255:29,0 chr1 45340487 . G . PASS END=45340490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:29,0 chr1 45340491 . A . PASS END=45340491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1006:0,71,255:25,0 chr1 45340492 . C . PASS END=45340493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr1 45340494 . C . PASS END=45340498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 45341290 . C . PASS END=45341367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:70:0,120,1800:0,187,255:40,0 chr1 45345483 . C . PASS END=45345483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 45345490 . C . PASS END=45345503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:23,0 chr1 45345504 . C . PASS END=45345508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr1 45345509 . T . PASS END=45345509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 45345510 . A . PASS END=45345527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,922:0,69,255:26,0 chr1 45345528 . C . PASS END=45345537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 45345538 . G . PASS END=45345538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 45345539 . A . PASS END=45345539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 45345540 . G . PASS END=45345540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 45345541 . C . PASS END=45345547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1017:0,87,255:29,0 chr1 45345548 . T . PASS END=45345548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:28,0 chr1 45345549 . T . PASS END=45345550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 45345551 . A . PASS END=45345551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 45345552 . T . PASS END=45345555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 45345556 . G . PASS END=45345557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 45345558 . G . PASS END=45345561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 45345562 . A . PASS END=45345562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr1 45345563 . T . PASS END=45345584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1141:0,83,255:33,0 chr1 45345585 . A . PASS END=45345585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 45345586 . C . PASS END=45345587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 45345588 . A . PASS END=45345588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:30,0 chr1 45345589 . G . PASS END=45345595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1133:0,82,255:33,0 chr1 45345596 . C . PASS END=45345596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr1 45345597 . A . PASS END=45345621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:33,0 chr1 45345622 . G . PASS END=45345626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1067:0,60,255:29,0 chr1 45345627 . C . PASS END=45345631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45345632 . T . PASS END=45345639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 45345640 . C . PASS END=45345640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:21,0 chr1 45345641 . A . PASS END=45345647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:21,0 chr1 45345648 . G . PASS END=45345650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 45345651 . T . PASS END=45345660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,61,255:21,0 chr1 45345661 . T . PASS END=45345680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,576:0,40,255:19,0 chr1 45345686 . G . PASS END=45345686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 45347284 . C . PASS END=45347411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:45:0,119,1621:0,119,255:40,0 chr1 45363027 . C . PASS END=45363028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:42:0,95,1490:0,95,255:40,0 chr1 45363029 . A . PASS END=45363029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:40,2 chr1 45363030 . T . PASS END=45363030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1484:0,63,255:40,2 chr1 45363031 . T . PASS END=45363116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:42:0,91,1506:0,91,255:40,0 chr1 45392300 . T . PASS END=45392394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:34:0,85,1437:0,85,255:40,1 chr1 45392395 . G . PASS END=45392395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1280:0,70,255:33,0 chr1 45392396 . A . PASS END=45392411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,98,255:36,0 chr1 45407178 . C . PASS END=45407192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,637:0,41,255:19,0 chr1 45407193 . C . PASS END=45407200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:23,0 chr1 45407201 . C . PASS END=45407202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 45407203 . G . PASS END=45407205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 45407206 . A . PASS END=45407206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:22,0 chr1 45407207 . A . PASS END=45407211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,785:0,69,255:25,0 chr1 45407212 . T . PASS END=45407212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:24,0 chr1 45407213 . T . PASS END=45407230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 45407231 . T . PASS END=45407231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 45407232 . T . PASS END=45407239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1149:0,90,255:33,0 chr1 45407240 . A . PASS END=45407240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:30,0 chr1 45407241 . A . PASS END=45407332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1177:0,80,255:38,0 chr1 45407333 . T . PASS END=45407333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 45407334 . C . PASS END=45407337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:28,0 chr1 45435650 . C . PASS END=45435664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 45435665 . A . PASS END=45435665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 45435666 . T . PASS END=45435666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45435667 . G . PASS END=45435669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 45435670 . T . PASS END=45435676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 45435677 . A . PASS END=45435677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 45435678 . T . PASS END=45435678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45435679 . A . PASS END=45435679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 45435680 . A . PASS END=45435680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45435681 . T . PASS END=45435681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 45435682 . C . PASS END=45435691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 45435692 . A . PASS END=45435693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 45435694 . G . PASS END=45435701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 45435702 . A . PASS END=45435702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 45435703 . A . PASS END=45435703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45435704 . G . PASS END=45435716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:17,0 chr1 45443987 . C . PASS END=45444132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,109,1476:0,109,255:40,0 chr1 45446693 . C . PASS END=45446837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:87:32:0,87,1305:0,96,255:40,0 chr1 45446838 . C . PASS END=45446838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 45446839 . A . PASS END=45446840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:30,0 chr1 45452181 . G . PASS END=45452181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 45452211 . C . PASS END=45452211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45452310 . T . PASS END=45452310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 45452327 . G . PASS END=45452327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 45469164 . T . PASS END=45469205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,892:0,62,255:26,0 chr1 45469206 . G . PASS END=45469223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,962:0,81,255:28,0 chr1 45469224 . G . PASS END=45469228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45469229 . T . PASS END=45469230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45469231 . T . PASS END=45469248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 45469341 . C . PASS END=45469346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:29:0,72,1080:0,77,255:26,0 chr1 45469347 . T . PASS END=45469380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:32,0 chr1 45469381 . A . PASS END=45469382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 45469383 . G . PASS END=45469390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 45469391 . C . PASS END=45469392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 45469393 . G . PASS END=45469394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45469395 . G . PASS END=45469397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45469398 . T . PASS END=45469401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45469402 . T . PASS END=45469412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 45469527 . C . PASS END=45469533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 45469534 . T . PASS END=45469534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1066:0,65,255:29,0 chr1 45469535 . G . PASS END=45469537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 45469538 . T . PASS END=45469538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1033:0,63,255:27,0 chr1 45469539 . G . PASS END=45469545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 45469546 . T . PASS END=45469546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 45469547 . G . PASS END=45469547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45469548 . T . PASS END=45469548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 45469549 . A . PASS END=45469558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:27,0 chr1 45469559 . T . PASS END=45469559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 45469560 . G . PASS END=45469566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 45469567 . G . PASS END=45469608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,885:0,64,255:26,0 chr1 45469732 . C . PASS END=45469806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,118,1800:0,118,255:40,0 chr1 45469920 . T . PASS END=45470049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:40:0,87,1305:0,87,255:40,0 chr1 45470272 . C . PASS END=45470478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,99,1412:0,99,255:40,0 chr1 45471466 . C . PASS END=45471496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:25,0 chr1 45471497 . C . PASS END=45471498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45471499 . C . PASS END=45471501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 45471502 . G . PASS END=45471509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 45471510 . C . PASS END=45471510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 45471511 . C . PASS END=45471537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,86,255:29,0 chr1 45471538 . A . PASS END=45471543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,992:0,70,255:26,0 chr1 45471544 . C . PASS END=45471544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45471545 . A . PASS END=45471555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 45471669 . C . PASS END=45471680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1023:0,81,255:30,0 chr1 45471681 . A . PASS END=45471681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 45471682 . C . PASS END=45471742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1218:0,90,255:36,0 chr1 45471743 . A . PASS END=45471743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:31,0 chr1 45471744 . G . PASS END=45471749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1279:0,99,255:33,0 chr1 45471750 . G . PASS END=45471750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:30,0 chr1 45471751 . G . PASS END=45471783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:32,0 chr1 45471784 . T . PASS END=45471788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:24,0 chr1 45472364 . C . PASS END=45472367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 45472368 . T . PASS END=45472368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,357:0,9,255:12,0 chr1 45472369 . T . PASS END=45472377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,507:0,42,255:15,0 chr1 45472378 . G . PASS END=45472378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 45472379 . T . PASS END=45472383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:17,0 chr1 45472384 . A . PASS END=45472384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 45472385 . G . PASS END=45472388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 45472389 . G . PASS END=45472389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 45472390 . G . PASS END=45472394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:18,0 chr1 45472395 . G . PASS END=45472423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:22,0 chr1 45472424 . C . PASS END=45472450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:19,0 chr1 45472451 . G . PASS END=45472451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 45472452 . T . PASS END=45472455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 45472456 . G . PASS END=45472456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 45472457 . G . PASS END=45472467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 45472623 . C . PASS END=45472655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,102,1639:0,102,255:40,0 chr1 45472656 . A . PASS END=45472656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1639:0,67,255:40,0 chr1 45472657 . C . PASS END=45472687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,155,255:40,0 chr1 45472891 . C . PASS END=45472943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,154,255:40,0 chr1 45473085 . C . PASS END=45473085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 45473086 . T . PASS END=45473086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 45473087 . G . PASS END=45473094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1097:0,90,255:31,0 chr1 45473095 . A . PASS END=45473095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,967:0,54,255:30,0 chr1 45473096 . C . PASS END=45473101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1154:0,93,255:33,0 chr1 45473102 . T . PASS END=45473102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:31,0 chr1 45473103 . C . PASS END=45473107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1227:0,99,255:33,0 chr1 45473108 . A . PASS END=45473108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1086:0,44,255:31,0 chr1 45473109 . G . PASS END=45473220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1248:0,81,255:40,0 chr1 45473221 . A . PASS END=45473232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1123:0,77,255:27,0 chr1 45473233 . C . PASS END=45473234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1017:0,84,255:28,0 chr1 45473235 . C . PASS END=45473235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 45473236 . T . PASS END=45473236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 45473237 . G . PASS END=45473237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 45473238 . G . PASS END=45473240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 45473241 . G . PASS END=45473245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 45473246 . G . PASS END=45473246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:22,0 chr1 45473247 . C . PASS END=45473250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:21,0 chr1 45473251 . A . PASS END=45473267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 45473912 . C . PASS END=45474061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:67:0,120,1800:0,168,255:40,0 chr1 45474208 . C . PASS END=45474373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,114,1710:0,126,255:40,0 chr1 45474816 . C . PASS END=45474816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1264:0,102,255:34,0 chr1 45474817 . T . PASS END=45474817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:32,0 chr1 45474818 . C . PASS END=45474880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:34:0,84,1167:0,84,255:39,0 chr1 45474881 . A . PASS END=45474881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 45474882 . C . PASS END=45474898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1360:0,84,255:34,0 chr1 45475041 . T . PASS END=45475041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 45475042 . C . PASS END=45475046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45475047 . A . PASS END=45475047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr1 45475048 . T . PASS END=45475129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:29:0,80,1169:0,80,255:40,0 chr1 45475130 . G . PASS END=45475130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1425:0,71,255:35,0 chr1 45475131 . G . PASS END=45475149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:37:0,93,1312:0,93,255:38,0 chr1 45475150 . G . PASS END=45475150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:35,0 chr1 45475151 . C . PASS END=45475154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1316:0,92,255:36,0 chr1 45475240 . T . PASS END=45475341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:37:0,84,1260:0,93,255:40,0 chr1 45475342 . A . PASS END=45475355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,85,255:26,0 chr1 45475658 . C . PASS END=45475793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:47:0,97,1591:0,97,255:40,0 chr1 45475873 . A . PASS END=45475965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,105,1549:0,110,255:40,0 chr1 45476218 . C . PASS END=45476232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,933:0,65,255:26,0 chr1 45476233 . T . PASS END=45476233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,896:0,48,255:24,0 chr1 45476234 . A . PASS END=45476234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45476235 . A . PASS END=45476249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1049:0,82,255:33,0 chr1 45476250 . C . PASS END=45476250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:32,0 chr1 45476251 . T . PASS END=45476324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1257:0,89,255:39,0 chr1 45476325 . C . PASS END=45476325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:30,0 chr1 45476326 . A . PASS END=45476345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1172:0,85,255:34,0 chr1 45476346 . C . PASS END=45476346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:30,0 chr1 45476347 . C . PASS END=45476378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1186:0,83,255:35,0 chr1 45476561 . C . PASS END=45476568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,562:0,43,255:19,0 chr1 45476569 . G . PASS END=45476569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 45476570 . C . PASS END=45476573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 45476574 . A . PASS END=45476576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45476577 . C . PASS END=45476577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 45476578 . A . PASS END=45476579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45476580 . A . PASS END=45476580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 45476581 . G . PASS END=45476619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:25,0 chr1 45476620 . C . PASS END=45476620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr1 45476621 . G . PASS END=45476622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 45476623 . A . PASS END=45476623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:19,0 chr1 45476624 . G . PASS END=45476640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 45476641 . C . PASS END=45476642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45476643 . A . PASS END=45476644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45476645 . G . PASS END=45476645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:19,0 chr1 45476646 . C . PASS END=45476648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45476649 . T . PASS END=45476651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45476652 . C . PASS END=45476654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45476655 . G . PASS END=45476655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 45476656 . C . PASS END=45476675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 45476676 . C . PASS END=45476676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:20,0 chr1 45476677 . C . PASS END=45476678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45476679 . G . PASS END=45476684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 45476685 . G . PASS END=45476685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 45476686 . G . PASS END=45476687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 45476688 . G . PASS END=45476688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 45476689 . C . PASS END=45476689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:21,0 chr1 45476690 . T . PASS END=45476690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45476691 . G . PASS END=45476691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 45476692 . G . PASS END=45476694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:24,0 chr1 45476695 . C . PASS END=45476695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 45476696 . T . PASS END=45476697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 45476698 . C . PASS END=45476698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:23,0 chr1 45476699 . G . PASS END=45476700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 45476701 . C . PASS END=45476701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 45476702 . G . PASS END=45476704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45476705 . C . PASS END=45476705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 45476706 . A . PASS END=45476706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45476707 . C . PASS END=45476707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 45476708 . A . PASS END=45476708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45476709 . C . PASS END=45476710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 45476711 . C . PASS END=45476714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 45476715 . C . PASS END=45476715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 45476716 . C . PASS END=45476716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:25,0 chr1 45476717 . C . PASS END=45476717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:24,0 chr1 45476718 . A . PASS END=45476718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,844:0,17,255:23,0 chr1 45476719 . G . PASS END=45476721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 45476722 . C . PASS END=45476723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:25,0 chr1 45476724 . T . PASS END=45476732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,856:0,64,255:25,0 chr1 45476733 . C . PASS END=45476733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,886:0,50,255:24,0 chr1 45476734 . A . PASS END=45476735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:25,0 chr1 45476736 . A . PASS END=45476736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,810:0,42,255:24,0 chr1 45476737 . C . PASS END=45476739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:26,0 chr1 45476740 . G . PASS END=45476740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 45476741 . C . PASS END=45476742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 45476743 . G . PASS END=45476743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,877:0,34,255:25,0 chr1 45476744 . A . PASS END=45476744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 45476745 . A . PASS END=45476745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr1 45476746 . G . PASS END=45476746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 45476747 . C . PASS END=45476747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 45476748 . A . PASS END=45476748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,864:0,64,255:26,0 chr1 45476749 . C . PASS END=45476749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 45476750 . G . PASS END=45476750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 45476751 . C . PASS END=45476753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 45476754 . G . PASS END=45476779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,931:0,60,255:26,0 chr1 45476780 . C . PASS END=45476780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,900:0,40,255:24,0 chr1 45476781 . T . PASS END=45476782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 45476783 . G . PASS END=45476783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,939:0,40,255:25,0 chr1 45476784 . T . PASS END=45476786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45476787 . A . PASS END=45476788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45476789 . C . PASS END=45476792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 45476793 . T . PASS END=45476793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:23,0 chr1 45476794 . C . PASS END=45476802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,992:0,68,255:25,0 chr1 45476803 . C . PASS END=45476808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:24:0,42,726:0,42,255:22,0 chr1 45476809 . C . PASS END=45476809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45476810 . C . PASS END=45476811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 45476812 . G . PASS END=45476812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45476813 . C . PASS END=45476813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,784:0,41,255:21,0 chr1 45476814 . G . PASS END=45476814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45476815 . C . PASS END=45476816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,734:0,50,255:21,0 chr1 45476817 . G . PASS END=45476817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45476818 . C . PASS END=45476818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,686:0,49,255:19,0 chr1 45476819 . T . PASS END=45476822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45476823 . A . PASS END=45476854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 45476855 . C . PASS END=45476855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:16,0 chr1 45476856 . T . PASS END=45476875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,698:0,49,255:19,0 chr1 45476876 . G . PASS END=45476879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 45476880 . A . PASS END=45476896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 45476897 . C . PASS END=45476900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:20:0,30,450:0,60,255:12,0 chr1 45476901 . A . PASS END=45476907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:27:14:0,27,405:0,42,255:9,0 chr1 45476908 . C . PASS END=45476910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 45476911 . C . PASS END=45476911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 45476912 . C . PASS END=45476922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 45476923 . C . PASS END=45476929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 45477875 . T . PASS END=45477875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1474:0,117,255:39,0 chr1 45477886 . C . PASS END=45477887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 45477937 . C . PASS END=45477957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,131,255:40,0 chr1 45478567 . C . PASS END=45478567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 45478578 . G . LowGQ END=45478579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:25:0,0,398:2,0,255:21,0 chr1 45478580 . C . PASS END=45478580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:25,0 chr1 45478581 . C . PASS END=45478581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,845:0,34,255:24,0 chr1 45478582 . T . LowGQ END=45478582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,570:17,0,255:20,0 chr1 45478583 . C . PASS END=45478583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 45478584 . A . PASS END=45478584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,754:0,31,255:22,0 chr1 45478585 . G . LowGQ END=45478585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,8:27:0:27:0,0,485:66,0,255:19,0 chr1 45478586 . G . PASS END=45478586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:14:28:0,14,819:0,14,255:24,0 chr1 45478587 . G . PASS END=45478587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:25,0 chr1 45478588 . T . PASS END=45478588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,781:0,50,255:25,0 chr1 45478589 . T . PASS END=45478589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:25,0 chr1 45478590 . T . PASS END=45478590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,925:0,32,255:25,0 chr1 45478591 . T . PASS END=45478591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45478592 . C . LowGQ END=45478592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,6:29:0:29:0,0,621:57,0,255:22,0 chr1 45478593 . C . PASS END=45478593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:20:29:0,20,762:0,20,255:24,0 chr1 45478594 . G . PASS END=45478594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,714:0,4,255:23,0 chr1 45478595 . G . PASS END=45478595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,948:0,60,255:27,0 chr1 45478596 . A . PASS END=45478596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:10:31:0,10,851:0,10,255:26,0 chr1 45478597 . G . PASS END=45478600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,861:0,70,255:28,0 chr1 45478601 . A . PASS END=45478601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:26,0 chr1 45478602 . A . PASS END=45478602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:26,0 chr1 45478603 . G . LowGQ END=45478603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,6:29:0:29:0,0,688:35,0,255:21,0 chr1 45478604 . A . PASS END=45478604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 45478605 . A . PASS END=45478605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45478606 . T . LowGQ END=45478607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,7:29:0:29:0,0,648:29,0,255:23,0 chr1 45478608 . A . PASS END=45478608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 45478609 . C . PASS END=45478609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,779:0,4,255:23,0 chr1 45478610 . A . PASS END=45478610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45478611 . C . LowGQ END=45478611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,751:18,0,255:23,0 chr1 45478612 . A . PASS END=45478612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45478613 . T . LowGQ END=45478613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,6:29:0:29:0,0,613:101,0,255:23,0 chr1 45478614 . T . PASS END=45478614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:39:29:0,39,783:0,39,255:26,0 chr1 45478615 . C . LowGQ END=45478615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,692:32,0,255:23,0 chr1 45478616 . C . PASS END=45478616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,847:0,23,255:25,0 chr1 45478617 . T . LowGQ END=45478617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,731:46,0,255:24,0 chr1 45478618 . G . PASS END=45478618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,814:0,21,255:25,0 chr1 45478619 . C . PASS END=45478619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 45478620 . G . PASS END=45478620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:26,0 chr1 45478621 . A . PASS END=45478623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr1 45478624 . A . PASS END=45478624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1097:0,82,255:29,0 chr1 45478625 . G . PASS END=45478625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:33,0 chr1 45478626 . C . PASS END=45478627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1349:0,98,255:36,0 chr1 45478628 . T . PASS END=45478628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:9:38:0,9,1106:0,9,255:31,0 chr1 45478629 . G . PASS END=45478629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr1 45478630 . G . PASS END=45478632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:36,0 chr1 45478633 . A . PASS END=45478633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:31:38:0,31,1151:0,31,255:31,0 chr1 45478634 . G . PASS END=45478635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1236:0,94,255:35,0 chr1 45478636 . G . PASS END=45478636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:33,0 chr1 45478637 . G . PASS END=45478637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1311:0,95,255:35,0 chr1 45478638 . A . PASS END=45478638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:9:38:0,9,1106:0,9,255:32,0 chr1 45478639 . A . PASS END=45478640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1620:0,114,255:37,0 chr1 45478641 . C . PASS END=45478641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1291:0,54,255:35,0 chr1 45478642 . A . PASS END=45478658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1273:0,84,255:38,0 chr1 45478659 . G . PASS END=45478659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1324:0,59,255:36,0 chr1 45478660 . G . PASS END=45478662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1380:0,98,255:38,0 chr1 45478663 . C . PASS END=45478663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1312:0,70,255:37,0 chr1 45478664 . A . PASS END=45478664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1335:0,84,255:36,0 chr1 45478665 . T . PASS END=45478665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1304:0,62,255:36,0 chr1 45478666 . G . PASS END=45478672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1382:0,84,255:37,0 chr1 45478673 . G . PASS END=45478673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:31,0 chr1 45478674 . C . PASS END=45478682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:38:0,87,1350:0,87,255:32,0 chr1 45478683 . A . PASS END=45478683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:32,0 chr1 45478684 . C . PASS END=45478684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:40:0,89,1429:0,89,255:32,0 chr1 45478685 . T . PASS END=45478685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1232:0,47,255:31,0 chr1 45478686 . T . PASS END=45478687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:32,0 chr1 45478688 . C . PASS END=45478690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:32,0 chr1 45478691 . G . PASS END=45478691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1163:0,55,255:30,0 chr1 45478808 . A . PASS END=45478877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:37:0,87,1372:0,87,255:40,0 chr1 45478878 . G . PASS END=45478878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr1 45478879 . A . PASS END=45478887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:34,0 chr1 45478964 . C . PASS END=45479044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1119:0,80,255:35,0 chr1 45479212 . A . PASS END=45479463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:47:0,95,1775:0,95,255:40,0 chr1 45479478 . G . PASS END=45479478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,111,1665:0,144,255:37,0 chr1 45479581 . T . PASS END=45479680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1216:0,83,255:37,0 chr1 45479681 . T . PASS END=45479681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:33,0 chr1 45479682 . T . PASS END=45479713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:32:0,82,1127:0,82,255:35,0 chr1 45479714 . T . PASS END=45479714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:31,0 chr1 45479715 . G . PASS END=45479720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:32,0 chr1 45479721 . A . PASS END=45479721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:28,0 chr1 45479722 . C . PASS END=45479732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:28,0 chr1 45479733 . T . PASS END=45479737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 45479738 . C . PASS END=45479743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:27:0,54,810:0,65,255:18,0 chr1 45480111 . G . PASS END=45480115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,906:0,62,255:26,0 chr1 45480116 . G . PASS END=45480149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,928:0,81,255:31,0 chr1 45480150 . C . PASS END=45480150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:28,0 chr1 45480151 . C . PASS END=45480154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:30,0 chr1 45480155 . G . PASS END=45480155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 45480156 . C . PASS END=45480203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1059:0,80,255:34,0 chr1 45480204 . G . PASS END=45480204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 45480205 . T . PASS END=45480220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 45480221 . G . PASS END=45480245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr1 45480246 . A . PASS END=45480246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr1 45480247 . T . PASS END=45480247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 45480248 . G . PASS END=45480248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:20,0 chr1 45480260 . G . PASS END=45480260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 45480408 . A . PASS END=45480508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1059:0,84,255:40,0 chr1 45480612 . G . PASS END=45480678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,114,1561:0,114,255:40,0 chr1 45481009 . G . PASS END=45481035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1211:0,89,255:35,0 chr1 45481036 . A . PASS END=45481036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:34,0 chr1 45481037 . T . PASS END=45481170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1372:0,87,255:40,0 chr1 45481215 . C . PASS END=45481215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 45481240 . G . PASS END=45481240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr1 45481250 . A . PASS END=45481250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,203,255:40,0 chr1 45484126 . T . PASS END=45484352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1105:0,83,255:40,0 chr1 45484353 . A . PASS END=45484353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:31,0 chr1 45484354 . C . PASS END=45484359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 45484360 . C . PASS END=45484372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,77,255:26,0 chr1 45484373 . T . PASS END=45484373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 45484374 . C . PASS END=45484400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 45484401 . G . PASS END=45484401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr1 45484402 . G . PASS END=45484408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 45484409 . G . PASS END=45484412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45484413 . T . PASS END=45484416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 45484417 . G . PASS END=45484419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45484420 . C . PASS END=45484421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45484422 . G . PASS END=45484423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 45484424 . C . PASS END=45484426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 45484427 . G . PASS END=45484431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 45484432 . A . PASS END=45484432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 45484433 . G . PASS END=45484433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45484434 . T . PASS END=45484473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 45484474 . A . PASS END=45484474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 45484475 . C . PASS END=45484476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45484477 . G . PASS END=45484483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 45484484 . C . PASS END=45484484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 45484485 . T . PASS END=45484485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45484486 . C . PASS END=45484487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:28,0 chr1 45484488 . T . PASS END=45484488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45484489 . C . PASS END=45484489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 45484490 . A . PASS END=45484491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45484492 . C . PASS END=45484492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 45484493 . A . PASS END=45484519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 45484520 . T . PASS END=45484520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 45484521 . T . PASS END=45484532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 45484533 . A . PASS END=45484533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,924:0,70,255:26,0 chr1 45484534 . G . PASS END=45484534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45484535 . T . PASS END=45484536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45484537 . G . PASS END=45484538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 45484539 . T . PASS END=45484563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr1 45484564 . A . PASS END=45484564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:22,0 chr1 45484565 . T . PASS END=45484575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,984:0,68,255:26,0 chr1 45484576 . G . PASS END=45484578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45484579 . A . PASS END=45484579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 45484580 . G . PASS END=45484580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45484581 . T . PASS END=45484595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,909:0,64,255:25,0 chr1 45484596 . C . PASS END=45484596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 45484597 . C . PASS END=45484603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,969:0,65,255:26,0 chr1 45484604 . A . PASS END=45484605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45484606 . A . PASS END=45484606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,806:0,70,255:26,0 chr1 45484607 . T . PASS END=45484613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1033:0,81,255:28,0 chr1 45484614 . T . PASS END=45484629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,71,255:25,0 chr1 45484630 . C . PASS END=45484633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45484634 . A . PASS END=45484635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 45484636 . G . PASS END=45484653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1111:0,87,255:30,0 chr1 45484654 . A . PASS END=45484654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 45484655 . C . PASS END=45484970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1147:0,81,255:40,0 chr1 45484971 . T . PASS END=45484982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 45484983 . G . PASS END=45484988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:24:0,51,765:0,72,255:19,0 chr1 45485738 . C . PASS END=45485739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 45485740 . A . PASS END=45485740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:30,0 chr1 45485741 . C . PASS END=45485809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1180:0,83,255:37,0 chr1 45485810 . T . PASS END=45485819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr1 45486297 . C . PASS END=45486307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 45486308 . G . PASS END=45486309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 45486310 . T . PASS END=45486318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,869:0,66,255:24,0 chr1 45486319 . A . PASS END=45486327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr1 45486328 . A . PASS END=45486328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 45486329 . G . PASS END=45486402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:32:0,85,1178:0,85,255:40,0 chr1 45486403 . G . PASS END=45486403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1344:0,68,255:39,0 chr1 45486404 . A . PASS END=45486405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:40,0 chr1 45486406 . G . PASS END=45486406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:38:45:0,38,1319:0,38,255:35,0 chr1 45486407 . A . PASS END=45486413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,102,1454:0,102,255:40,0 chr1 45486414 . G . PASS END=45486414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1277:0,68,255:37,0 chr1 45486415 . T . PASS END=45486456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1307:0,90,255:40,0 chr1 45486457 . T . PASS END=45486460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:37:0,75,1125:0,111,255:26,0 chr1 45499984 . C . PASS END=45500141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:33:0,99,1227:0,99,255:40,0 chr1 45500200 . T . PASS END=45500230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,102,1530:0,125,255:40,0 chr1 45501360 . C . PASS END=45501490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:31:0,86,1194:0,86,255:40,0 chr1 45501491 . A . PASS END=45501491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 45501492 . C . PASS END=45501492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 45501493 . C . PASS END=45501495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1100:0,74,255:26,0 chr1 45501711 . C . PASS END=45501716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:23,0 chr1 45501717 . G . PASS END=45501717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 45501718 . C . PASS END=45501719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 45501720 . G . PASS END=45501721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 45501722 . A . PASS END=45501740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,819:0,61,255:25,0 chr1 45501741 . G . PASS END=45501743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:32,0 chr1 45501744 . T . PASS END=45501744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,914:0,62,255:29,0 chr1 45501745 . T . PASS END=45501760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1217:0,86,255:35,0 chr1 45501761 . T . PASS END=45501761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr1 45501762 . C . PASS END=45501774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1191:0,89,255:37,0 chr1 45501775 . T . PASS END=45501775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr1 45501776 . T . PASS END=45501939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1260:0,93,255:40,0 chr1 45501940 . C . PASS END=45501959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 45501960 . T . PASS END=45501971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 45504608 . C . PASS END=45504641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,902:0,72,255:26,0 chr1 45504642 . G . PASS END=45504669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 45504670 . C . PASS END=45504675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 45504676 . A . PASS END=45504676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45504677 . T . PASS END=45504682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,71,255:23,0 chr1 45504683 . C . PASS END=45504689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:24,0 chr1 45504690 . G . PASS END=45504700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,53,255:19,0 chr1 45504701 . A . PASS END=45504701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:17,0 chr1 45504702 . G . PASS END=45504711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 45504712 . T . PASS END=45504712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,396:0,37,255:17,0 chr1 45504713 . T . PASS END=45504719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 45504720 . G C, 101.18 PASS DP=19;MQ=228.81;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,11,0:0,7,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,10:0,0,7,11 chr1 45504721 . G . PASS END=45504730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 45504731 . C . PASS END=45504731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 45504732 . T . PASS END=45504732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 45504733 . C . PASS END=45504740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 45504741 . C . PASS END=45504741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 45504742 . A . PASS END=45504742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:9,0 chr1 45504743 . G . PASS END=45504745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:9,0 chr1 45506064 . C . PASS END=45506070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 45506071 . C . PASS END=45506072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 45506073 . G . PASS END=45506095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:33,0 chr1 45506096 . C . PASS END=45506100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1237:0,64,255:36,1 chr1 45506101 . C . PASS END=45506182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1301:0,98,255:40,0 chr1 45506183 . A . PASS END=45506183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1112:0,77,255:31,0 chr1 45506184 . C . PASS END=45506191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:32,0 chr1 45506192 . C . PASS END=45506208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:22:0,60,900:0,66,255:23,0 chr1 45506209 . C . PASS END=45506210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45508891 . C . PASS END=45508892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 45508893 . A . PASS END=45508896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,969:0,65,255:26,0 chr1 45508897 . A . PASS END=45508904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1119:0,84,255:31,0 chr1 45508905 . T . PASS END=45508906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:30,0 chr1 45508907 . G . PASS END=45508995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1133:0,80,255:40,0 chr1 45508996 . T . PASS END=45508996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1472:0,74,255:39,0 chr1 45508997 . A . PASS END=45509029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1350:0,107,255:40,0 chr1 45509030 . T . PASS END=45509055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 45509056 . T . PASS END=45509060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45509061 . A . PASS END=45509067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:20,0 chr1 45516746 . C . PASS END=45516747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 45516748 . G . PASS END=45516756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr1 45516757 . A . PASS END=45516905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:27:0,80,994:0,80,255:40,0 chr1 45516906 . T . PASS END=45516911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 45516912 . C . PASS END=45516925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:41:19:0,41,651:0,41,255:19,0 chr1 45524281 . C . PASS END=45524286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,931:0,65,255:26,0 chr1 45524287 . C . PASS END=45524287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45524288 . A . PASS END=45524288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 45524289 . T . PASS END=45524431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:34:0,85,1196:0,85,255:40,0 chr1 45525771 . C . PASS END=45525919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:34:0,85,1180:0,85,255:40,0 chr1 45553553 . C . PASS END=45553721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:37:0,82,1123:0,82,255:40,0 chr1 45553722 . T . PASS END=45553722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:37,0 chr1 45553723 . T . PASS END=45553759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1080:0,83,255:39,0 chr1 45553760 . C . PASS END=45553766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 45553767 . G . PASS END=45553768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45553769 . C . PASS END=45553770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 45553771 . C . PASS END=45553798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1078:0,80,255:31,0 chr1 45553799 . C . PASS END=45553799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 45553800 . A . PASS END=45553809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:30,0 chr1 45553810 . G . PASS END=45553817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,80,255:26,0 chr1 45553818 . T . PASS END=45553818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:39:29:0,39,856:0,39,255:21,0 chr1 45553819 . T . PASS END=45553824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:24,0 chr1 45553825 . C . PASS END=45553825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 45553826 . G . PASS END=45553839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 45553840 . G . PASS END=45553840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,888:0,50,255:25,0 chr1 45553841 . C . PASS END=45553853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,923:0,65,255:26,0 chr1 45553854 . C . PASS END=45553854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 45553855 . A . PASS END=45553880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,892:0,69,255:25,0 chr1 45553881 . C . PASS END=45553885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45553886 . T . PASS END=45553886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45553887 . T . PASS END=45553898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr1 45553899 . C . PASS END=45553899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 45553900 . A . PASS END=45553902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 45553903 . T . PASS END=45553903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 45553904 . G . PASS END=45553904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 45553905 . A . PASS END=45553909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,540:0,35,255:12,0 chr1 45671428 . C . PASS END=45671487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:34:0,94,1280:0,94,255:39,0 chr1 45671488 . G . PASS END=45671488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:32,0 chr1 45671489 . G . PASS END=45671500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:32:0,81,1215:0,91,255:31,0 chr1 45671501 . A . PASS END=45671530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 45671531 . C . PASS END=45671542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:16:0,45,675:0,48,255:16,0 chr1 45671543 . T . PASS END=45671547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:11,0 chr1 45671548 . C . PASS END=45671553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:15:0,21,315:0,45,255:8,0 chr1 45671554 . C . PASS END=45671556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:11:0,15,225:0,33,255:6,0 chr1 45671557 . C . LowGQ END=45671685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 45671686 . A . PASS END=45671702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 45671703 . C . LowGQ END=45671703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 45671704 . G . PASS END=45671714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 45671715 . G . PASS END=45671825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,78:3,0 chr1 45671826 . A . PASS END=45671925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr1 45671926 . G . PASS END=45671973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 45671974 . A . PASS END=45671974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 45671975 . G . PASS END=45672005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 45672006 . T . PASS END=45672008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 45672009 . C . PASS END=45672021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:8,0 chr1 45672022 . T . PASS END=45672022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 45792821 . A . PASS END=45792842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr1 45792843 . T . PASS END=45792845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 45792846 . G . PASS END=45792846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 45792847 . C . PASS END=45792866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 45792867 . C . PASS END=45792948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 45792949 . G . PASS END=45792958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 45792959 . C . PASS END=45792966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 45792967 . C . PASS END=45792973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 45792974 . G . PASS END=45792979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 45792980 . T . PASS END=45793001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 45793002 . G . PASS END=45793012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 45793013 . C . PASS END=45793019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 45793020 . A . PASS END=45793032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 45793033 . G . PASS END=45793037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45793038 . A . PASS END=45793082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 45793083 . C . LowGQ END=45793083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 45793084 . C . PASS END=45793102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 45793103 . C . PASS END=45793103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 45793104 . T . PASS END=45793108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 45793109 . G . PASS END=45793121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 45793122 . G . PASS END=45793151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 45793152 . A . PASS END=45793158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 45793159 . G . PASS END=45793165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr1 45793166 . G . PASS END=45793166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 45793167 . C . PASS END=45793173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 45793174 . C . PASS END=45793177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 45793178 . G . PASS END=45793205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 45793206 . G . PASS END=45793212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 45793213 . C . PASS END=45793214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 45793215 . T . PASS END=45793216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45793217 . C . PASS END=45793219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 45793220 . G . LowGQ END=45793220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 45793221 . A . PASS END=45793238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 45793239 . G . PASS END=45793242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 45793243 . C . PASS END=45793252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 45793253 . G . PASS END=45793261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 45793262 . C . PASS END=45793357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr1 45793358 . T . PASS END=45793364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45793365 . A . PASS END=45793387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 45793388 . C . PASS END=45793436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,512:0,40,255:19,0 chr1 45793437 . G . PASS END=45793451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,722:0,60,255:21,0 chr1 45793452 . G . PASS END=45793455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 45793456 . G . PASS END=45793456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45793457 . A . PASS END=45793467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 45793468 . C . PASS END=45793472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 45793473 . A . PASS END=45793509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,635:0,40,255:19,0 chr1 45793510 . G . PASS END=45793514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 45793515 . A . PASS END=45793532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 45793533 . C . PASS END=45793537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,44,255:13,0 chr1 45793538 . C . PASS END=45793544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:15,0 chr1 45793545 . A . PASS END=45793594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr1 45793595 . G . PASS END=45793595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 45793596 . T . PASS END=45793599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 45793600 . G . PASS END=45793600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 45793601 . C . PASS END=45793601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45793602 . T . PASS END=45793602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr1 45793603 . G . PASS END=45793603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45793604 . T . PASS END=45793604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 45793605 . A . PASS END=45793606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45793607 . A . PASS END=45793607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 45793608 . C . PASS END=45793608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 45793609 . G . PASS END=45793616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 45793617 . T . PASS END=45793617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr1 45793618 . T . PASS END=45793624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 45793625 . G . PASS END=45793625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 45793626 . C . PASS END=45793635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 45793636 . G . PASS END=45793636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 45793637 . G . PASS END=45793639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 45793640 . G . PASS END=45793640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 45793641 . C . PASS END=45793644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 45793645 . T . PASS END=45793645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 45793646 . G . PASS END=45793647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 45793648 . T . PASS END=45793648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 45793649 . G . PASS END=45793660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 45793661 . C . PASS END=45793661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 45793662 . T . PASS END=45793677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 45793678 . A . PASS END=45793678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 45793679 . T . PASS END=45793679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 45793680 . A . PASS END=45793699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 45793700 . G . PASS END=45793720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:11,0 chr1 45793721 . G . PASS END=45793722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 45793723 . G . PASS END=45793724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 45793725 . A . PASS END=45793732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,405:0,20,255:9,0 chr1 45793733 . C . PASS END=45793734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 45793735 . T . PASS END=45793735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 45793736 . C . PASS END=45793748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:12,0 chr1 45793749 . A . PASS END=45793749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr1 45793750 . G . PASS END=45793768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 45793769 . G . PASS END=45793769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 45793770 . A . PASS END=45793780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 45793781 . T . PASS END=45793781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr1 45793782 . T . PASS END=45793793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:11,0 chr1 45793794 . T . PASS END=45793794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 45793795 . C . PASS END=45793810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 45793811 . T . PASS END=45793811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 45793812 . T . PASS END=45793861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,388:0,33,255:13,0 chr1 45793862 . G . PASS END=45793862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 45793863 . G . PASS END=45793872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 45793873 . G . PASS END=45793873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 45793874 . G . PASS END=45793880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 45793881 . T . PASS END=45793882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45793883 . A . PASS END=45793888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 45793889 . C . PASS END=45793891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45793892 . T . PASS END=45793892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 45793893 . G . PASS END=45793893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 45793894 . G . PASS END=45793936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 45794938 . T . PASS END=45794938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:81:0,120,1800:0,212,255:40,0 chr1 45794959 . A . PASS END=45794959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:83:0,120,1800:0,216,255:40,0 chr1 45794971 . A . PASS END=45794971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr1 45794974 . G . PASS END=45794975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:81:0,120,1800:0,243,255:40,0 chr1 45794978 . T . PASS END=45795094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:87:41:0,87,1305:0,107,255:40,0 chr1 45795095 . G . PASS END=45795095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:28,0 chr1 45795096 . G . PASS END=45795098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1350:0,92,255:30,0 chr1 45795099 . C . PASS END=45795099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1122:0,74,255:30,0 chr1 45795100 . T . PASS END=45795102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 45795103 . T . PASS END=45795104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 45795105 . G . PASS END=45795109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 45795111 . T . PASS END=45795113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1133:0,93,255:31,0 chr1 45795114 . G . PASS END=45795114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 45795120 . A . PASS END=45795120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 45796178 . G . PASS END=45796178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 45796181 . G . PASS END=45796181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 45796183 . C . PASS END=45796185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 45796187 . C . PASS END=45796211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1108:0,87,255:31,0 chr1 45796212 . C . PASS END=45796212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 45796213 . T . PASS END=45796222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 45796223 . G . PASS END=45796223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr1 45796224 . G . PASS END=45796224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45796225 . A . PASS END=45796230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 45796232 . A . PASS END=45796233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 45796239 . A . PASS END=45796240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 45796847 . G . PASS END=45796848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45796850 . G . PASS END=45796851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45796852 . G . PASS END=45796852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 45796854 . C . PASS END=45796854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45796855 . T . PASS END=45796855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr1 45796856 . T . PASS END=45796856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45796857 . T . PASS END=45796865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr1 45796866 . G . PASS END=45796869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 45796870 . G . PASS END=45796870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 45796871 . A . PASS END=45796886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:24,0 chr1 45796887 . A . PASS END=45796887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 45796888 . A . PASS END=45796896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,902:0,75,255:26,0 chr1 45796897 . T . PASS END=45796912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 45796913 . C . PASS END=45796921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 45796922 . G . PASS END=45796925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 45796926 . G . PASS END=45796926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 45796927 . G . PASS END=45796927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45796928 . T . PASS END=45796964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 45796965 . T . PASS END=45797004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,566:0,40,255:19,0 chr1 45797005 . A . PASS END=45797005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 45797006 . C . PASS END=45797006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 45797007 . C . PASS END=45797007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 45797008 . T . PASS END=45797008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 45797010 . G . PASS END=45797010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 45797079 . G . PASS END=45797079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 45797086 . A . PASS END=45797086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 45797088 . T . PASS END=45797089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 45797091 . C . PASS END=45797092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 45797093 . T . PASS END=45797093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 45797094 . C . PASS END=45797098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 45797099 . A . PASS END=45797099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:13,0 chr1 45797100 . G . PASS END=45797104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 45797105 . C . PASS END=45797105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,512:0,7,255:15,0 chr1 45797106 . G . PASS END=45797107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 45797108 . A . PASS END=45797108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,474:0,21,255:15,0 chr1 45797109 . G . PASS END=45797112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr1 45797113 . C . PASS END=45797113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 45797114 . G . PASS END=45797116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr1 45797117 . G . PASS END=45797117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 45797118 . C . PASS END=45797126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,615:0,40,255:19,0 chr1 45797127 . G . PASS END=45797128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45797129 . C . PASS END=45797132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:52:21:0,52,770:0,52,255:20,0 chr1 45797133 . C . PASS END=45797135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 45797136 . A . PASS END=45797136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 45797137 . A . PASS END=45797151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,925:0,62,255:26,0 chr1 45797152 . C . PASS END=45797152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 45797153 . A . PASS END=45797153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 45797154 . G . PASS END=45797164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:29,0 chr1 45797165 . C . PASS END=45797165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 45797166 . G . PASS END=45797173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr1 45797174 . T . PASS END=45797174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 45797175 . G . PASS END=45797185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 45797186 . T . PASS END=45797190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 45797191 . G . PASS END=45797193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45797194 . C . PASS END=45797212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 45797213 . A . PASS END=45797213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 45797214 . G . PASS END=45797228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,930:0,72,255:24,0 chr1 45797230 . T . PASS END=45797231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45797233 . G . PASS END=45797233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45797324 . T . PASS END=45797324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 45797328 . G . PASS END=45797328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 45797331 . A . PASS END=45797400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:19,0 chr1 45797401 . G . PASS END=45797407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 45797408 . T . PASS END=45797408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 45797409 . C . PASS END=45797428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 45797429 . G . PASS END=45797429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 45797430 . G . PASS END=45797437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 45797438 . T . PASS END=45797438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 45797439 . T . PASS END=45797454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,764:0,66,255:23,0 chr1 45797455 . A . PASS END=45797455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45797456 . C . PASS END=45797467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 45797468 . G . PASS END=45797504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,923:0,65,255:25,0 chr1 45797505 . C G, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=2.859;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,16,0:0.640,0.000:25:3,6,0:6,10,0:46:85,0,46,564,314,878:255,0,255:7,0:5.0000e+01,1.0225e-04,4.8686e+01,4.5000e+02,3.4863e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,7,9:6,3,9,7 chr1 45797506 . T . PASS END=45797532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,837:0,66,255:22,0 chr1 45797533 . G . PASS END=45797535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,71,255:19,0 chr1 45797536 . C . PASS END=45797536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45797687 . G . PASS END=45797687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 45797690 . C . PASS END=45797690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 45797692 . C . PASS END=45797692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 45797695 . C . PASS END=45797715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1064:0,84,255:31,0 chr1 45797716 . T . PASS END=45797718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:26,0 chr1 45797719 . C . PASS END=45797722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 45797723 . C . PASS END=45797725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 45797726 . G . PASS END=45797738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 45797739 . A . PASS END=45797739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr1 45797740 . A . PASS END=45797758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:29,0 chr1 45797760 . T . PASS END=45797761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45797768 . A . PASS END=45797768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45797828 . G . PASS END=45797828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 45797831 . G . PASS END=45797832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 45797835 . T . PASS END=45797836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 45797838 . T . PASS END=45797844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 45797845 . C . PASS END=45797845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 45797846 . G . PASS END=45797869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,976:0,65,255:25,0 chr1 45797870 . G . PASS END=45797880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 45797881 . C . PASS END=45797912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,917:0,64,255:26,0 chr1 45797913 . C . PASS END=45797913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45797914 . C . PASS END=45797914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 45797915 . C . PASS END=45797916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 45797917 . A . PASS END=45797950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,834:0,64,255:26,0 chr1 45797951 . G . PASS END=45797951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:21,0 chr1 45797952 . G . PASS END=45797968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 45797969 . G . PASS END=45797982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,53,255:17,0 chr1 45797984 . T . PASS END=45797984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 45797988 . A . PASS END=45797989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:17,0 chr1 45798059 . C . PASS END=45798059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 45798063 . C . PASS END=45798064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 45798065 . G . PASS END=45798065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 45798066 . A . PASS END=45798066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,368:0,11,255:13,0 chr1 45798067 . G . PASS END=45798075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 45798076 . A . PASS END=45798076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 45798077 . A . PASS END=45798084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 45798085 . T . PASS END=45798085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr1 45798086 . G . PASS END=45798087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 45798088 . T . PASS END=45798088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 45798089 . G . PASS END=45798106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 45798107 . G . PASS END=45798109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 45798110 . T . PASS END=45798111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 45798112 . G . PASS END=45798135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,50,255:20,0 chr1 45798136 . C . PASS END=45798142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 45798143 . A . PASS END=45798143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 45798144 . T . PASS END=45798149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 45798150 . A . PASS END=45798150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 45798151 . C . PASS END=45798161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,748:0,66,255:22,0 chr1 45798163 . G . PASS END=45798164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 45798232 . G . PASS END=45798232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 45798243 . C . PASS END=45798243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 45798245 . C . PASS END=45798279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 45798280 . G . PASS END=45798280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:24,0 chr1 45798281 . T . PASS END=45798291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 45798292 . A . PASS END=45798294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 45798295 . C . PASS END=45798339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:26,0 chr1 45798340 . C . PASS END=45798340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 45798341 . C . PASS END=45798357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,847:0,69,255:23,0 chr1 45798358 . A . PASS END=45798358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 45798359 . C . PASS END=45798359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45798361 . T . PASS END=45798361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45798364 . T . PASS END=45798364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45798417 . C . PASS END=45798417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 45798429 . C . PASS END=45798429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:23,0 chr1 45798431 . T . PASS END=45798433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 45798435 . C . PASS END=45798445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 45798446 . C . PASS END=45798446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 45798447 . C . PASS END=45798460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:25,0 chr1 45798461 . G . PASS END=45798461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 45798462 . G . PASS END=45798462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45798463 . C . PASS END=45798464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45798465 . A . PASS END=45798470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,909:0,67,255:26,0 chr1 45798471 . A . PASS END=45798471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr1 45798472 . T . PASS END=45798477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,939:0,67,255:26,0 chr1 45798478 . C . PASS END=45798483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 45798484 . C . PASS END=45798484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 45798485 . C . PASS END=45798491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 45798492 . G . PASS END=45798492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 45798493 . A . PASS END=45798502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 45798503 . C . PASS END=45798503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 45798504 . C . PASS END=45798506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45798508 . T . PASS END=45798508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45798510 . T . PASS END=45798511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45798514 . T . PASS END=45798514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 45798518 . A . PASS END=45798518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45798558 . T . PASS END=45798558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 45798588 . A . PASS END=45798588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 45798590 . C . PASS END=45798592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1325:0,95,255:36,0 chr1 45798593 . C . PASS END=45798632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1147:0,80,255:36,0 chr1 45798634 . A . PASS END=45798634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 45798635 . T . PASS END=45798635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,959:0,54,255:30,0 chr1 45798638 . C . PASS END=45798638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 45798764 . G . PASS END=45798764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 45798766 . C . PASS END=45798849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:36:0,81,1283:0,81,255:39,0 chr1 45798853 . G . PASS END=45798853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 45798855 . G . PASS END=45798855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:31,0 chr1 45798948 . T . PASS END=45798948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 45798951 . A . PASS END=45798951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45798954 . G . PASS END=45798954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45798957 . C . PASS END=45798989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr1 45798990 . C . PASS END=45798990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 45798991 . T . PASS END=45798996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 45798999 . G . PASS END=45798999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 45799001 . C . PASS END=45799001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 45799010 . C . PASS END=45799010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 45799075 . G . PASS END=45799075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 45799081 . C . PASS END=45799081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45799084 . C . PASS END=45799088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 45799089 . C . PASS END=45799091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,58,255:19,0 chr1 45799092 . C . PASS END=45799095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45799096 . A . PASS END=45799096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 45799097 . T . PASS END=45799099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45799100 . T . PASS END=45799103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:20:0,49,753:0,49,255:20,0 chr1 45799104 . T . PASS END=45799113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,848:0,69,255:24,0 chr1 45799114 . C . PASS END=45799114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 45799115 . T . PASS END=45799126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,890:0,64,255:26,0 chr1 45799127 . G . PASS END=45799195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1016:0,83,255:33,0 chr1 45799196 . G . PASS END=45799206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 45799207 . C . PASS END=45799211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:28,0 chr1 45799212 . T . PASS END=45799212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,854:0,29,255:26,0 chr1 45799213 . C . PASS END=45799218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr1 45799219 . G . PASS END=45799235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:26:0,63,945:0,71,255:27,0 chr1 45799236 . G . PASS END=45799236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:20,0 chr1 45799237 . C . PASS END=45799241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:22,0 chr1 45799242 . G . PASS END=45799250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45799251 . C . PASS END=45799260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 45799261 . T . PASS END=45799274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,47,255:19,0 chr1 45799275 . G . PASS END=45799275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:13,0 chr1 45799276 . C . PASS END=45799282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 45799283 . T . PASS END=45799283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr1 45799284 . C . PASS END=45799285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 45799286 . G . PASS END=45799286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr1 45799287 . G . PASS END=45799287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:8,0 chr1 45799288 . G . PASS END=45799289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 45800058 . C . PASS END=45800060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,120,1800:0,129,255:40,0 chr1 45800062 . C . PASS END=45800183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:34:0,90,1350:0,101,255:40,0 chr1 45800185 . T . PASS END=45800185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 45800188 . A . PASS END=45800188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 45800190 . C . PASS END=45800190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 45800197 . A . PASS END=45800197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 45803858 . C . PASS END=45803869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,155,255:40,0 chr1 45805871 . G . PASS END=45805871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 45805875 . C . PASS END=45805878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 45805879 . A . PASS END=45805879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 45805880 . G . PASS END=45805902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 45805903 . C . PASS END=45805904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 45805905 . G . PASS END=45805937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,466:0,36,255:13,0 chr1 45805938 . G . PASS END=45805984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 45805985 . C . PASS END=45805986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:12,0 chr1 45805987 . T . PASS END=45805987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 45805988 . C . PASS END=45805988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 45805989 . C . PASS END=45805989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 45805990 . C . PASS END=45805990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 45805991 . A . PASS END=45805994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 45806026 . G . PASS END=45806026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 45806053 . G . PASS END=45806053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 45806091 . G . PASS END=45806091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 45806103 . A . PASS END=45806103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 45806745 . G . PASS END=45806752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 45806753 . A . PASS END=45806753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 45806754 . G . PASS END=45806755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45806756 . A . PASS END=45806756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:28,0 chr1 45806757 . A . PASS END=45806757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 45806758 . A . PASS END=45806758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,964:0,59,255:29,0 chr1 45806759 . A . PASS END=45806770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:34,0 chr1 45806771 . G . PASS END=45806771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:33,0 chr1 45806772 . G . PASS END=45806813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:34:0,82,1253:0,82,255:39,0 chr1 45806814 . G . PASS END=45806814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr1 45806815 . C . PASS END=45806890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1228:0,81,255:38,0 chr1 45806891 . A . PASS END=45806891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:30,0 chr1 45806892 . G . PASS END=45806902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:35:0,94,1159:0,94,255:34,0 chr1 45806920 . T . PASS END=45806965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1380:0,98,255:38,0 chr1 45806966 . T . PASS END=45806966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1086:0,55,255:31,0 chr1 45806967 . A . PASS END=45806977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:35:0,80,1280:0,80,255:35,0 chr1 45806978 . C . PASS END=45806978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:31,0 chr1 45806979 . T . PASS END=45807011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1131:0,91,255:36,0 chr1 45807012 . A . PASS END=45807012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1198:0,64,255:35,0 chr1 45807013 . C . PASS END=45807015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1410:0,111,255:37,0 chr1 45807145 . G . PASS END=45807238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1127:0,80,255:40,0 chr1 45807239 . A . PASS END=45807241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 45807621 . G . PASS END=45807770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:33:0,84,1260:0,99,255:40,0 chr1 45807771 . A . PASS END=45807779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:25,0 chr1 45808056 . G . PASS END=45808074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:25,0 chr1 45808075 . A . PASS END=45808107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:38,0 chr1 45808108 . G . PASS END=45808108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 45808109 . A . PASS END=45808300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:33:0,86,1225:0,86,255:40,0 chr1 45808301 . T . PASS END=45808301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1135:0,72,255:31,0 chr1 45808302 . G . PASS END=45808303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 45808304 . C . PASS END=45808304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:32,0 chr1 45808305 . T . PASS END=45808315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1227:0,102,255:34,0 chr1 45808515 . T . PASS END=45808636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:40:0,85,1413:0,85,255:40,0 chr1 45808637 . A . PASS END=45808637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:30,0 chr1 45808638 . C . PASS END=45808642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:40:0,87,1305:0,87,255:30,0 chr1 45808643 . C . PASS END=45808643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:29,0 chr1 45808644 . T . PASS END=45808648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,89,255:30,0 chr1 45808649 . C . PASS END=45808649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr1 45808650 . C . PASS END=45808655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:29,0 chr1 45808656 . C . PASS END=45808656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 45808657 . A . PASS END=45808661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:29,0 chr1 45808662 . T . PASS END=45808662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 45808663 . G . PASS END=45808666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1005:0,87,255:30,0 chr1 45808667 . A . PASS END=45808667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 45808668 . C . PASS END=45808668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 45808669 . T . PASS END=45808669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 45808670 . T . PASS END=45808674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 45808752 . A . PASS END=45808752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 45808754 . G . PASS END=45808767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,682:0,44,255:18,0 chr1 45808768 . C . PASS END=45808768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 45808769 . C . PASS END=45808769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 45808770 . C . PASS END=45808772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45808773 . T . PASS END=45808773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr1 45808774 . G . PASS END=45808786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 45808787 . C . PASS END=45808788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45808789 . T . PASS END=45808789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 45808790 . C . PASS END=45808790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45808791 . A . PASS END=45808794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,751:0,47,255:19,0 chr1 45808795 . T . PASS END=45808811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,841:0,66,255:25,0 chr1 45808812 . T . PASS END=45808812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 45808813 . C . PASS END=45808860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,842:0,75,255:26,0 chr1 45808861 . A . PASS END=45808865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 45808866 . G . PASS END=45808898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,68,255:27,0 chr1 45808899 . C . PASS END=45808907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 45808908 . A . PASS END=45808910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 45808911 . C . PASS END=45808912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 45808913 . T . PASS END=45808913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:28,0 chr1 45808914 . C . PASS END=45808916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 45808917 . G . PASS END=45808917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 45808918 . G . PASS END=45808929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1094:0,87,255:33,0 chr1 45808930 . T . PASS END=45808930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr1 45808931 . G . PASS END=45808945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 45808946 . C . PASS END=45808946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 45808947 . A . PASS END=45808976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1117:0,82,255:31,0 chr1 45808977 . A . PASS END=45808977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:29,0 chr1 45808978 . A . PASS END=45809010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,90,255:31,0 chr1 45809011 . G . PASS END=45809011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 45809012 . A . PASS END=45809013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45809014 . C . PASS END=45809016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 45809017 . G . PASS END=45809019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 45809020 . T . PASS END=45809074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,793:0,61,255:26,0 chr1 45809075 . C . PASS END=45809075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45809076 . C . PASS END=45809076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 45809077 . T . PASS END=45809094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr1 45809095 . T . PASS END=45809096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 45809097 . C . PASS END=45809102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:27,0 chr1 45809103 . A . PASS END=45809104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 45809105 . G . PASS END=45809111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 45809112 . G . PASS END=45809112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 45809113 . G . PASS END=45809122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 45809123 . A . PASS END=45809137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 45809138 . C . PASS END=45809138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 45809139 . C . PASS END=45809143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,978:0,67,255:26,0 chr1 45809144 . G . PASS END=45809144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 45809145 . A . PASS END=45809170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 45809171 . G . PASS END=45809171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 45809172 . C . PASS END=45809172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 45809173 . C . PASS END=45809176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 45809177 . A . PASS END=45809180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:20,0 chr1 45809181 . C . PASS END=45809215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,639:0,44,255:19,0 chr1 45809216 . G . PASS END=45809218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45809219 . C . PASS END=45809226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,798:0,53,255:19,0 chr1 45809227 . C . PASS END=45809228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 45809229 . G . PASS END=45809252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:18:0,44,698:0,44,255:19,0 chr1 45809253 . A . PASS END=45809254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45809255 . T . PASS END=45809259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 45809260 . C . PASS END=45809261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45809262 . A . PASS END=45809262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 45809263 . T . PASS END=45809263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 45809264 . A . PASS END=45809264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,631:0,33,255:18,0 chr1 45809265 . A . PASS END=45809265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 45809266 . G . PASS END=45809282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 45809283 . A . PASS END=45809293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 45809294 . C . PASS END=45809294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 45809295 . T . PASS END=45809297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 45809298 . C . PASS END=45809298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 45809299 . A . PASS END=45809301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 45809302 . G . PASS END=45809302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 45809303 . G . PASS END=45809303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 45809304 . C . PASS END=45809304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:29,0 chr1 45809305 . C . PASS END=45809306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 45809307 . A . PASS END=45809307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 45809308 . G . PASS END=45809312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 45809313 . A . PASS END=45809313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:28,0 chr1 45809314 . G . PASS END=45809317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,89,255:29,0 chr1 45809318 . T . PASS END=45809318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,924:0,56,255:28,0 chr1 45809319 . C . PASS END=45809320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 45809321 . C . PASS END=45809321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:27,0 chr1 45809322 . G . PASS END=45809331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 45809332 . A . PASS END=45809332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 45809333 . G . PASS END=45809338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1102:0,87,255:29,0 chr1 45809339 . A . PASS END=45809374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,931:0,64,255:26,0 chr1 45810512 . T . PASS END=45810514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 45810515 . C . PASS END=45810518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 45810519 . T . PASS END=45810519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 45810520 . C . PASS END=45810521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 45810522 . T . PASS END=45810522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 45810523 . G . PASS END=45810534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,958:0,84,255:30,0 chr1 45810535 . T . PASS END=45810535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,950:0,59,255:28,0 chr1 45810536 . T . PASS END=45810581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1131:0,87,255:34,0 chr1 45810582 . G . PASS END=45810582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:30,0 chr1 45810583 . C . PASS END=45810658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1064:0,80,255:32,1 chr1 45810659 . A . PASS END=45810659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 45810660 . C . PASS END=45810661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 45810662 . A . PASS END=45810662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 45810663 . T . PASS END=45810674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr1 45810675 . A . PASS END=45810675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 45810676 . G . PASS END=45810676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 45810677 . A . PASS END=45810677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 45810678 . A . PASS END=45810680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 45810681 . G . PASS END=45810699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,901:0,75,255:25,0 chr1 45810700 . G . PASS END=45810700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 45810701 . G . PASS END=45810732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,847:0,61,255:26,0 chr1 45810733 . A . PASS END=45810734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 45810735 . G . PASS END=45810740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 45810741 . A . PASS END=45810744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45810745 . C . PASS END=45810745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45810746 . T . PASS END=45810746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:18,0 chr1 45810747 . T . PASS END=45810749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:23:0,55,807:0,55,255:19,0 chr1 45810750 . A . PASS END=45810750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 45810751 . C . PASS END=45810837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:15:0,43,574:0,43,255:19,0 chr1 45810838 . A . PASS END=45810871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr1 45810872 . G . PASS END=45810875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 45810876 . A . PASS END=45810876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 45810877 . T . PASS END=45810885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:18,0 chr1 45810886 . C . PASS END=45810909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,646:0,41,255:19,0 chr1 45810910 . G . PASS END=45810910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:17,0 chr1 45810911 . G . PASS END=45810912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 45810913 . G . PASS END=45810915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 45810916 . T . PASS END=45810917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 45810918 . G . PASS END=45810922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 45810923 . G A, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=1.123;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,13,0:0.619,0.000:21:4,6,0:4,7,0:47:85,0,47,465,286,751:255,0,244:8,0:5.0000e+01,8.3095e-05,5.0391e+01,4.5000e+02,3.2083e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,6,7:3,5,5,8 chr1 45810924 . G . PASS END=45810951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,748:0,66,255:23,0 chr1 45810952 . G . PASS END=45810952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 45810953 . A . PASS END=45810955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 45810956 . G . PASS END=45810956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 45810957 . A . PASS END=45810960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 45810961 . C . PASS END=45810964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 45810965 . C . PASS END=45810965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 45810966 . T . PASS END=45810973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 45810974 . C . PASS END=45810974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:24,0 chr1 45810975 . A . PASS END=45811033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,878:0,61,255:26,0 chr1 45811034 . T . PASS END=45811034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 45811035 . T . PASS END=45811084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,831:0,62,255:26,0 chr1 45811085 . A . PASS END=45811085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 45811086 . C . PASS END=45811119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,876:0,68,255:26,0 chr1 45811120 . C . PASS END=45811120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:26,0 chr1 45811121 . T . PASS END=45811123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 45811124 . C . PASS END=45811127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 45811128 . C . PASS END=45811128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45811129 . T . PASS END=45811157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,984:0,65,255:26,0 chr1 45811158 . C . PASS END=45811162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 45811163 . T . PASS END=45811165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45811166 . C . PASS END=45811180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr1 45811181 . G . PASS END=45811181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 45811182 . T . PASS END=45811189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 45811190 . T . PASS END=45811190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 45811191 . G . PASS END=45811194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45811195 . T . PASS END=45811195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 45811196 . T . PASS END=45811198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45811199 . T . PASS END=45811230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,747:0,63,255:26,0 chr1 45811549 . C . PASS END=45811666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:36:0,81,1215:0,92,255:40,0 chr1 45812365 . G . PASS END=45812451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:57:0,120,1800:0,158,255:40,0 chr1 45812651 . C . PASS END=45812734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1310:0,92,255:40,0 chr1 45813281 . C . PASS END=45813365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,102,1405:0,114,255:40,0 chr1 45813590 . C . PASS END=45813672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:39:0,90,1350:0,110,255:40,0 chr1 45820975 . C . PASS END=45820978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 45820979 . G . PASS END=45820986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 45820987 . G . PASS END=45820988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45820989 . C . PASS END=45820996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 45820997 . A . PASS END=45820997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 45820998 . A . PASS END=45820998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 45820999 . A . PASS END=45820999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 45821000 . A . PASS END=45821019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:31,0 chr1 45821020 . G . PASS END=45821020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 45821021 . C . PASS END=45821081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1149:0,93,255:40,0 chr1 45821082 . T . PASS END=45821082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 45821083 . A . PASS END=45821083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 45821084 . C . PASS END=45821108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,853:0,61,255:25,0 chr1 45821109 . C . PASS END=45821109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 45821110 . G . PASS END=45821121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,847:0,69,255:23,0 chr1 45851584 . C . PASS END=45851632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,151,255:40,0 chr1 45887397 . C . PASS END=45887518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:94:36:0,94,1244:0,94,255:40,0 chr1 45923236 . C . PASS END=45923424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:30:0,80,1169:0,80,255:40,1 chr1 45923425 . T . PASS END=45923444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,71,255:26,0 chr1 45923445 . T . PASS END=45923451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:19,0 chr1 45923452 . A . PASS END=45923457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:30:20:0,30,450:0,60,255:13,0 chr1 45960731 . T . PASS END=45960753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:37:0,85,1288:0,85,255:40,0 chr1 45960754 . A . PASS END=45960754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1321:0,68,255:39,0 chr1 45960755 . G . PASS END=45960838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:82:32:0,82,1260:0,82,255:40,0 chr1 45961090 . C . PASS END=45961207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1161:0,80,255:40,0 chr1 45962228 . C . PASS END=45962295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1350:0,91,255:40,0 chr1 45962971 . T . PASS END=45963055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:34:0,81,1215:0,86,255:40,0 chr1 45965017 . C . PASS END=45965017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:34,0 chr1 45965018 . T . PASS END=45965027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,105,1575:0,108,255:37,0 chr1 45965028 . A . PASS END=45965028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1152:0,78,255:34,0 chr1 45965029 . C . PASS END=45965040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1323:0,81,255:37,0 chr1 45965041 . A . PASS END=45965041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:56:39:0,56,1296:0,56,255:34,0 chr1 45965042 . C . PASS END=45965115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1147:0,88,255:40,0 chr1 45965204 . C . PASS END=45965204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 45965205 . T . PASS END=45965205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:28,0 chr1 45965206 . T . PASS END=45965230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:33,0 chr1 45965231 . A . PASS END=45965231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:27,0 chr1 45965232 . G . PASS END=45965259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1097:0,93,255:32,0 chr1 45965260 . A . PASS END=45965260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,964:0,63,255:28,0 chr1 45965261 . C . PASS END=45965270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 45965271 . C . PASS END=45965281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,942:0,73,255:26,0 chr1 45965857 . T . PASS END=45965857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 45965882 . A . PASS END=45965882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 45965899 . G . PASS END=45965899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 45965911 . A . PASS END=45965911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 45965980 . G . PASS END=45965980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 45966005 . A . PASS END=45966059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:33:0,84,1260:0,91,255:39,0 chr1 45966060 . T . PASS END=45966061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:31:0,68,1123:0,68,255:28,0 chr1 45966062 . G . PASS END=45966062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 45966063 . G . PASS END=45966063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:26,0 chr1 45966064 . C . PASS END=45966067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 45966068 . G . PASS END=45966086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr1 45966087 . T . PASS END=45966087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 45973014 . A . PASS END=45973014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr1 45973027 . G . PASS END=45973030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 45973031 . G . PASS END=45973051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1002:0,81,255:34,0 chr1 45973052 . C . PASS END=45973052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr1 45973053 . C . PASS END=45973197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,101,255:40,0 chr1 45973198 . C . PASS END=45973207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 45973208 . G . PASS END=45973208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:24,0 chr1 45973209 . G . PASS END=45973216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 45973217 . A . PASS END=45973222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr1 45973874 . A . PASS END=45973874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 45973880 . C . PASS END=45973880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr1 45973884 . A . PASS END=45973904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:33:0,94,1222:0,94,255:37,0 chr1 45973905 . G . PASS END=45973905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:36,0 chr1 45973906 . A . PASS END=45973916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1204:0,94,255:37,0 chr1 45973917 . G . PASS END=45973917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 45973918 . A . PASS END=45973999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1180:0,83,255:40,0 chr1 45974000 . A . PASS END=45974002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 45974003 . A . PASS END=45974003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45974004 . C . PASS END=45974017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,74,255:26,0 chr1 45974018 . T . PASS END=45974037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:18,0 chr1 45974468 . C . PASS END=45974471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr1 45974472 . T . PASS END=45974507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,446:0,42,255:19,0 chr1 45974508 . G . PASS END=45974517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,687:0,63,255:22,0 chr1 45974518 . C . PASS END=45974518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr1 45974519 . C . PASS END=45974534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,809:0,61,255:26,0 chr1 45974535 . T . PASS END=45974608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1105:0,82,255:35,0 chr1 45974609 . G . PASS END=45974609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:26,0 chr1 45974610 . C . PASS END=45974611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45974612 . C . PASS END=45974613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 45974614 . A . PASS END=45974623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 45974624 . T . PASS END=45974641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 45974642 . G . PASS END=45974642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 45974643 . A . PASS END=45974643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:26,0 chr1 45974644 . T . PASS END=45974644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 45974645 . T . PASS END=45974650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 45974651 . T . PASS END=45974658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 45974659 . T . PASS END=45974668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,80,255:26,0 chr1 45974669 . C . PASS END=45974680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1156:0,83,255:30,0 chr1 45974681 . T . PASS END=45974681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 45974682 . A . PASS END=45974697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1125:0,90,255:31,0 chr1 45974698 . G . PASS END=45974698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 45974699 . G . PASS END=45974726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1208:0,83,255:31,0 chr1 45974727 . G . PASS END=45974731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1008:0,71,255:26,0 chr1 45974732 . G . PASS END=45974756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 45974757 . C . PASS END=45974759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 45974760 . A . PASS END=45974760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:25,0 chr1 45974761 . G . PASS END=45974791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:26,0 chr1 45974792 . T . PASS END=45974792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 45974793 . T . PASS END=45974804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 45974805 . C . PASS END=45974816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:22:0,50,775:0,50,255:19,0 chr1 45974817 . C . PASS END=45974840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:22,0 chr1 45974841 . G . PASS END=45974887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,637:0,51,255:19,0 chr1 45974892 . C . PASS END=45974892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 45974898 . T . PASS END=45974898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 45974969 . A . PASS END=45974969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 45974971 . G . PASS END=45974971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45974997 . A . PASS END=45974997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 45975056 . G . PASS END=45975056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:51:36:0,51,765:0,108,255:17,0 chr1 45975072 . A . PASS END=45975072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:30:37:0,30,450:0,111,255:10,0 chr1 45975087 . A . PASS END=45975087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:9:34:0,9,135:0,30,255:3,1 chr1 45975088 . GTT GT,G,GTTTTTTT,GTTTTTTTT,GTTTTT,GTTTTTT, 131.78 PASS DP=33;MQ=231.02;MQRankSum=0.559;ReadPosRankSum=-2.023;FractionInformativeReads=0.879;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/3:2,11,2,1,6,5,2,0:0.379,0.069,0.034,0.207,0.172,0.069,0.000:29:1,4,2,1,3,1,2,0:1,7,0,0,3,4,0,0:17:154,258,66,304,321,132,99,10,76,66,121,35,102,499,91,179,91,154,338,352,147,135,46,111,413,430,362,102,51,0,43,42,57,70,60,8:255,0,186:2,43:1.3178e+02,2.4137e+02,5.2706e+01,2.8801e+02,3.1124e+02,1.1886e+02,8.2390e+01,9.7605e-02,6.6121e+01,5.3098e+01,1.0520e+02,2.4854e+01,9.2038e+01,4.5000e+02,7.7854e+01,1.6241e+02,8.0497e+01,1.4365e+02,3.2758e+02,3.4155e+02,1.3350e+02,1.1852e+02,3.5660e+01,1.0065e+02,4.0258e+02,4.2029e+02,3.5140e+02,8.8660e+01,6.3498e+01,1.8580e+01,6.2004e+01,6.1051e+01,7.5227e+01,8.8780e+01,7.8343e+01,2.3185e+01:0.00,6.00,9.00,6.00,12.00,9.00,6.00,12.00,12.00,9.00,6.00,12.00,12.00,12.00,9.00,6.00,12.00,12.00,12.00,12.00,9.00,6.00,12.00,12.00,12.00,12.00,12.00,9.00,34.77,40.77,40.77,40.77,40.77,40.77,40.77,37.77:0,2,11,16:1,1,13,14 chr1 45975104 . T . PASS END=45975104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 45975145 . G . PASS END=45975145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 45975354 . G . PASS END=45975354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 45975423 . A . PASS END=45975423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 45975849 . C . PASS END=45975849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 45975887 . A . PASS END=45975887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,876:0,61,255:23,0 chr1 45975988 . G . PASS END=45975988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 45976040 . C . PASS END=45976040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 45976099 . G . PASS END=45976099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 45976126 . G . PASS END=45976126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 45976128 . G . PASS END=45976128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 45976192 . C . PASS END=45976192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 45976248 . A . PASS END=45976248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:21:0,33,495:0,63,255:11,0 chr1 45976360 . G . PASS END=45976360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 45976429 . T . PASS END=45976429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 45976488 . G . PASS END=45976488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 45976509 . T . PASS END=45976509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 45976532 . C . PASS END=45976532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 45976588 . T . PASS END=45976588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 45976601 . A . PASS END=45976601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 45976630 . C . PASS END=45976630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 45977001 . T . PASS END=45977088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:38:0,85,1429:0,85,255:40,0 chr1 45980179 . C . PASS END=45980309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:42:0,80,1523:0,80,255:40,0 chr1 45980545 . C . PASS END=45980667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:89:34:0,89,1096:0,89,255:40,0 chr1 45981326 . C . PASS END=45981326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1072:0,44,255:31,0 chr1 45981327 . A . PASS END=45981327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:32,0 chr1 45981328 . T . PASS END=45981328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1069:0,17,255:31,0 chr1 45981329 . G . PASS END=45981329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:33,0 chr1 45981330 . C . PASS END=45981332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1279:0,89,255:34,0 chr1 45981333 . G . PASS END=45981333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:33,0 chr1 45981334 . A . PASS END=45981334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1084:0,55,255:32,0 chr1 45981335 . T . PASS END=45981335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1288:0,81,255:36,0 chr1 45981336 . G . PASS END=45981336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1288:0,59,255:36,0 chr1 45981337 . A . PASS END=45981338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1365:0,98,255:37,0 chr1 45981339 . A . PASS END=45981339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1302:0,59,255:36,0 chr1 45981340 . G . PASS END=45981340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1302:0,67,255:36,0 chr1 45981341 . A . PASS END=45981341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 45981342 . A . PASS END=45981342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1329:0,76,255:38,0 chr1 45981343 . G . PASS END=45981344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:41:0,90,1412:0,90,255:40,0 chr1 45981345 . G . PASS END=45981345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1366:0,68,255:39,0 chr1 45981346 . A . PASS END=45981355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:85:41:0,85,1399:0,85,255:40,0 chr1 45981356 . G . PASS END=45981356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:61:49:0,61,1623:0,61,255:40,0 chr1 45981357 . A . PASS END=45981369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:95:49:0,95,1648:0,95,255:40,0 chr1 45981370 . T . PASS END=45981370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:64:51:0,64,1544:0,64,255:40,0 chr1 45981371 . T . PASS END=45981474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:36:0,87,1305:0,95,255:40,0 chr1 45981475 . T . PASS END=45981479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:33:0,84,1260:0,89,255:28,0 chr1 45984610 . C . PASS END=45984617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,959:0,87,255:29,0 chr1 45984618 . T . PASS END=45984618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 45984619 . C . PASS END=45984631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1094:0,90,255:33,0 chr1 45984632 . A . PASS END=45984632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:31,0 chr1 45984633 . T . PASS END=45984705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1189:0,91,255:38,0 chr1 45984706 . C . PASS END=45984706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 45984707 . T . PASS END=45984713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 45984714 . A . PASS END=45984714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 45984715 . T . PASS END=45984715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 46027467 . A . PASS END=46027532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1147:0,89,255:40,0 chr1 46027533 . A . PASS END=46027550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr1 46032241 . G . PASS END=46032241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:18,0 chr1 46032242 . T . PASS END=46032244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 46032245 . A . PASS END=46032246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 46032247 . G . PASS END=46032258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:25,0 chr1 46032259 . T . PASS END=46032259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:22,0 chr1 46032260 . A . PASS END=46032269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 46032270 . C . PASS END=46032271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46032272 . T . PASS END=46032273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46032274 . G . PASS END=46032284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,833:0,61,255:26,0 chr1 46032285 . C . PASS END=46032285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 46032286 . A . PASS END=46032286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46032287 . T . PASS END=46032287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,826:0,50,255:25,0 chr1 46032288 . T . PASS END=46032289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 46032290 . A . PASS END=46032291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46032292 . T . PASS END=46032292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 46032293 . G . PASS END=46032293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46032294 . T . PASS END=46032294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 46032295 . G . PASS END=46032310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 46032311 . A G, 46.01 PASS DP=27;MQ=250.00;MQRankSum=4.243;ReadPosRankSum=4.243;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,10,0:0.370,0.000:27:6,4,0:11,6,0:45:81,0,50,358,600,958:255,0,255:17,0:4.6013e+01,1.3047e-04,5.3000e+01,3.5757e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,3,4,6:7,10,4,6 chr1 46032312 . T . PASS END=46032319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 46032320 . A . PASS END=46032320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:24,0 chr1 46032321 . G . PASS END=46032347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 46032348 . G . PASS END=46032348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 46032349 . G . PASS END=46032355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 46032356 . G . PASS END=46032356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 46032357 . C . PASS END=46032358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 46032359 . A . PASS END=46032360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 46032541 . G . PASS END=46032696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:31:0,82,1067:0,82,255:40,0 chr1 46033639 . C . PASS END=46033642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 46033643 . C . PASS END=46033650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:25,0 chr1 46033651 . C . PASS END=46033651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 46033652 . A . PASS END=46033652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 46033653 . G . PASS END=46033663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,880:0,87,255:30,0 chr1 46033664 . A . PASS END=46033664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 46033665 . A . PASS END=46033818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1133:0,90,255:40,0 chr1 46033819 . T . PASS END=46033841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr1 46033842 . T . PASS END=46033842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,754:0,41,255:21,0 chr1 46033843 . C . PASS END=46033843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 46033844 . T . PASS END=46033844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 46033845 . T . PASS END=46033846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 46033847 . C . PASS END=46033847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 46033848 . A . PASS END=46033849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 46034157 . G . PASS END=46034158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 46034159 . G . PASS END=46034166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,839:0,62,255:26,0 chr1 46034167 . A . PASS END=46034167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46034168 . C . PASS END=46034168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 46034169 . C . PASS END=46034171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 46034172 . T . PASS END=46034172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:28,0 chr1 46034173 . A . PASS END=46034175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 46034176 . T . PASS END=46034176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 46034177 . G . PASS END=46034183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1086:0,90,255:30,0 chr1 46034184 . A . PASS END=46034184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 46034185 . A . PASS END=46034189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46034190 . C . PASS END=46034190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 46034191 . T . PASS END=46034191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46034192 . A . PASS END=46034192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 46034193 . A . PASS END=46034354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:30:0,84,1094:0,90,255:40,0 chr1 46034355 . A . PASS END=46034355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:27,0 chr1 46034356 . G . PASS END=46034356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 46034599 . G . PASS END=46034671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,155,255:40,0 chr1 46034815 . G . PASS END=46034901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,162,255:40,0 chr1 46035563 . G . PASS END=46035628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,768:0,66,255:26,0 chr1 46049819 . A . PASS END=46049821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 46049822 . G . PASS END=46049824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 46049825 . A . PASS END=46049825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 46049826 . T . PASS END=46049833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 46049834 . A . PASS END=46049837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46049838 . C . PASS END=46049855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 46049856 . C . PASS END=46049877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,592:0,40,255:19,0 chr1 46056895 . A . PASS END=46056942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:45:0,111,1506:0,111,255:40,0 chr1 46066057 . C . PASS END=46066129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:77:0,120,1800:0,227,255:40,0 chr1 46067927 . T . PASS END=46068037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:40:0,86,1398:0,86,255:40,0 chr1 46070608 . A . PASS END=46070688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:50:0,120,1800:0,150,255:40,0 chr1 46072154 . A . PASS END=46072263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:52:0,120,1800:0,156,255:40,0 chr1 46072993 . A . PASS END=46073632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:32:0,81,1122:0,81,255:40,1 chr1 46073633 . G . PASS END=46073633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:29,0 chr1 46073634 . G . PASS END=46073644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1164:0,83,255:31,0 chr1 46073645 . C . PASS END=46073651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,83,255:26,0 chr1 46073652 . G . PASS END=46073672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:30,0 chr1 46073673 . T . PASS END=46073673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 46073674 . C . PASS END=46073674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46073675 . T . PASS END=46073675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 46073676 . G . PASS END=46073696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1170:0,87,255:31,0 chr1 46073697 . C . PASS END=46073698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:29,0 chr1 46073699 . A . PASS END=46073702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 46073703 . C . PASS END=46073703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46073704 . T . PASS END=46073704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr1 46073705 . C . PASS END=46073766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1172:0,83,255:36,0 chr1 46073767 . A . PASS END=46073767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1325:0,75,255:30,0 chr1 46073768 . G . PASS END=46073794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:34,0 chr1 46073795 . A . PASS END=46073795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:29,0 chr1 46073796 . A . PASS END=46073892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1125:0,80,255:40,0 chr1 46073893 . A . PASS END=46073893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1449:0,75,255:40,0 chr1 46073894 . T . PASS END=46074009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,120,1800:0,125,255:40,0 chr1 46078841 . A . PASS END=46078853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,207,255:40,0 chr1 46078854 . A G, 49.08 PASS DP=76;MQ=247.93;MQRankSum=5.782;ReadPosRankSum=3.724;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,34,0:0.447,0.000:76:21,15,0:21,19,0:48:84,0,50,1208,1470,2679:255,0,255:40,0:4.9083e+01,7.5329e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,20,21,13:19,23,18,16 chr1 46078855 . G . PASS END=46078883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:79:0,120,1800:0,207,255:40,0 chr1 46078884 . C T, 48.16 PASS DP=87;MQ=247.77;MQRankSum=6.272;ReadPosRankSum=2.194;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,37,0:0.425,0.000:87:25,15,0:25,22,0:47:83,0,50,1291,1699,2990:255,0,255:40,0:4.8162e+01,8.8013e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,26,22,15:29,21,12,25 chr1 46078885 . G . PASS END=46078920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:85:0,120,1800:0,222,255:40,0 chr1 46079768 . T . PASS END=46079853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:98:47:0,98,1605:0,98,255:40,0 chr1 46079965 . G . PASS END=46080038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,147,255:40,0 chr1 46080685 . A . PASS END=46080865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1059:0,81,255:40,0 chr1 46080866 . C . PASS END=46080869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 46080870 . A . PASS END=46080873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:28,0 chr1 46080977 . C . PASS END=46080984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:41:0,114,1710:0,123,255:40,0 chr1 46080985 . A . PASS END=46081143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:45:0,108,1665:0,108,255:40,0 chr1 46082009 . G . PASS END=46082065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:70:0,120,1800:0,191,255:40,0 chr1 46082298 . A . PASS END=46082375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,170,255:40,0 chr1 46083135 . A . PASS END=46083139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:22,0 chr1 46083140 . A . PASS END=46083140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 46083141 . C . PASS END=46083158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:25,0 chr1 46083159 . C . PASS END=46083161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 46083162 . A . PASS END=46083163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 46083164 . A . PASS END=46083164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 46083165 . G . PASS END=46083188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,834:0,72,255:25,0 chr1 46083189 . G . PASS END=46083189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 46083190 . A . PASS END=46083193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,856:0,75,255:25,0 chr1 46083194 . G . PASS END=46083194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 46083195 . G . PASS END=46083201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46083202 . A . PASS END=46083210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr1 46083211 . G . PASS END=46083223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,71,255:24,0 chr1 46083224 . C . PASS END=46083263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 46083733 . G . PASS END=46083743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1197:0,99,255:34,0 chr1 46083744 . G . PASS END=46083797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1241:0,86,255:39,0 chr1 46083798 . A . PASS END=46083798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 46083799 . A . PASS END=46083803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46083804 . T . PASS END=46083813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:25,0 chr1 46085947 . T . PASS END=46086018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr1 46086019 . G . PASS END=46086019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 46086020 . A . PASS END=46086039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,243:9,0 chr1 46086040 . T . PASS END=46086076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,272:0,27,255:9,0 chr1 46086077 . C T, 50.00 PASS DP=8;MQ=250.00;MQRankSum=2.017;ReadPosRankSum=0.922;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,4,0:0.500,0.000:8:1,3,0:3,1,0:48:85,0,50,143,143,286:109,0,131:4,0:5.0000e+01,6.5233e-05,5.3000e+01,1.4305e+02,1.7785e+02,2.8913e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,3,1:2,2,4,0 chr1 46086078 . T . PASS END=46086093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,250:0,24,250:8,0 chr1 46086094 . T . PASS END=46086094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 46086095 . G . PASS END=46086105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 46086314 . T . PASS END=46086314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,1 chr1 46086315 . C . PASS END=46086315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:25:0,40,888:0,40,255:24,1 chr1 46086316 . A . PASS END=46086316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:25,0 chr1 46086317 . A . PASS END=46086328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,893:0,75,255:26,0 chr1 46086329 . C T, 50.00 PASS DP=28;MQ=248.90;MQRankSum=4.433;ReadPosRankSum=3.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,16,0:0.571,0.000:28:6,9,0:6,7,0:48:85,0,49,535,429,965:255,0,255:11,0:5.0000e+01,7.1705e-05,5.1864e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,10,6:6,6,9,7 chr1 46086330 . G . PASS END=46086332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46086333 . A . PASS END=46086333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46086334 . G . PASS END=46086334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 46086335 . C . PASS END=46086346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46086347 . C . PASS END=46086366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,71,255:25,0 chr1 46086367 . G . PASS END=46086382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:26,0 chr1 46086383 . C . PASS END=46086392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 46086393 . A . PASS END=46086393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 46086394 . C . PASS END=46086396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 46086397 . G . PASS END=46086398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 46086399 . G . PASS END=46086770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:40,0 chr1 46086771 . G . PASS END=46086771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:27,0 chr1 46086772 . A . PASS END=46086772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 46086773 . T . PASS END=46086776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1047:0,71,255:26,0 chr1 46086777 . G . PASS END=46086779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 46086780 . G . PASS END=46086781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46086782 . T . PASS END=46086783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:27,0 chr1 46086784 . G . PASS END=46086785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:25,0 chr1 46086953 . C . PASS END=46086954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 46086955 . G . PASS END=46086955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 46086956 . G . PASS END=46086964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 46086965 . T . PASS END=46086965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 46086966 . G . PASS END=46086972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 46086973 . G . PASS END=46086973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr1 46086974 . G . PASS END=46086990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,831:0,66,255:24,0 chr1 46086991 . G . PASS END=46086991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 46086992 . C . PASS END=46086994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 46086995 . A . PASS END=46086997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 46086998 . G . PASS END=46087008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,939:0,75,255:25,0 chr1 46087009 . A . PASS END=46087009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 46087010 . G . PASS END=46087010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 46087011 . G . PASS END=46087013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,59,255:19,0 chr1 46087014 . G . PASS END=46087017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 46087018 . G . PASS END=46087018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 46087019 . G . PASS END=46087025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 46087026 . A . PASS END=46087026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 46087027 . A . PASS END=46087027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 46087028 . A . PASS END=46087028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,681:0,55,255:22,0 chr1 46087029 . G . PASS END=46087034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:25,0 chr1 46087035 . G . PASS END=46087037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 46087038 . G . PASS END=46087038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 46087039 . C . PASS END=46087046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr1 46087047 . T . PASS END=46087047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 46087048 . G . PASS END=46087056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 46087057 . T . PASS END=46087057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 46087058 . G . PASS END=46087065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 46087066 . T . PASS END=46087066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 46087067 . C . PASS END=46087067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46087068 . C . PASS END=46087068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 46087069 . A . PASS END=46087069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46087070 . T . PASS END=46087074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1016:0,71,255:27,0 chr1 46087075 . T . PASS END=46087075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46087076 . G . PASS END=46087081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 46087082 . C . PASS END=46087082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 46087083 . C . PASS END=46087085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 46087086 . T . PASS END=46087091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 46087092 . G . PASS END=46087126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,65,255:26,0 chr1 46087127 . A . PASS END=46087127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 46087128 . G . PASS END=46087134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 46087135 . A . PASS END=46087135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 46087136 . T . PASS END=46087142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 46087143 . T . PASS END=46087143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 46087144 . G . PASS END=46087151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 46087152 . C . PASS END=46087152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 46087153 . A . PASS END=46087153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr1 46087154 . G . PASS END=46087156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 46087310 . C . PASS END=46087322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 46087323 . G . PASS END=46087323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 46087324 . T . PASS END=46087324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 46087325 . G . PASS END=46087382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,945:0,62,255:26,0 chr1 46087383 . T . PASS END=46087383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 46087384 . G . PASS END=46087385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 46087386 . T . PASS END=46087386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 46087387 . C . PASS END=46087395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 46087396 . A . PASS END=46087396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 46087397 . G . PASS END=46087407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr1 46087549 . C . PASS END=46087574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,881:0,61,255:26,0 chr1 46087575 . G . PASS END=46087575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 46087576 . C . PASS END=46087576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 46087577 . G A, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.043;ReadPosRankSum=0.636;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,20,0:0.714,0.000:28:4,14,0:4,6,0:39:85,0,37,185,185,185:255,0,218:8,0:5.0000e+01,5.0144e-04,3.9769e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,6,4,16:4,4,10,10 chr1 46087578 . G . PASS END=46087583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 46087584 . C . PASS END=46087584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,858:0,56,255:28,0 chr1 46087585 . C . PASS END=46087588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1153:0,80,255:32,0 chr1 46087589 . G . PASS END=46087589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1084:0,66,255:29,0 chr1 46087590 . G . PASS END=46087593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:34,0 chr1 46087594 . C . PASS END=46087594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 46087595 . G . PASS END=46087597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 46087598 . A . PASS END=46087598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:31,0 chr1 46087599 . G . PASS END=46087608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1296:0,94,255:34,0 chr1 46087609 . A . PASS END=46087609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1307:0,78,255:34,0 chr1 46087610 . T . PASS END=46087613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:37:0,97,1185:0,97,255:35,0 chr1 46087614 . T . PASS END=46087614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1170:0,39,255:33,0 chr1 46087615 . C . PASS END=46087648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1217:0,86,255:34,0 chr1 46087649 . A . PASS END=46087649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:31,0 chr1 46087650 . G . PASS END=46087665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr1 46087666 . C . PASS END=46087666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 46087667 . C . PASS END=46087667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46087913 . C . PASS END=46087916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 46087917 . G . PASS END=46087919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:26,0 chr1 46087920 . T . PASS END=46087951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1047:0,84,255:31,0 chr1 46087952 . T . PASS END=46087952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 46087953 . T . PASS END=46087994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1093:0,93,255:32,0 chr1 46087995 . C . PASS END=46087995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 46087996 . T . PASS END=46088006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 46088007 . G . PASS END=46088007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 46088008 . G . PASS END=46088014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 46088015 . C . PASS END=46088020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46088221 . C . PASS END=46088239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,947:0,64,255:26,0 chr1 46088240 . C . PASS END=46088261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:28,0 chr1 46088262 . T . PASS END=46088287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,907:0,62,255:26,0 chr1 46088288 . C . PASS END=46088288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 46088289 . A . PASS END=46088337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:25,0 chr1 46088338 . C . PASS END=46088338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:22,0 chr1 46088339 . C . PASS END=46088339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 46088423 . C . PASS END=46088466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1172:0,83,255:33,0 chr1 46088467 . A . PASS END=46088477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 46088478 . C . PASS END=46088499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 46088500 . C . PASS END=46088506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 46088627 . C . PASS END=46088665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr1 46088666 . A . PASS END=46088666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 46088667 . C . PASS END=46088677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,653:0,43,255:18,0 chr1 46088678 . C . PASS END=46088681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46088682 . G . PASS END=46088686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 46088687 . C . PASS END=46088691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 46088692 . G . PASS END=46088715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,698:0,44,255:19,0 chr1 46088716 . C . PASS END=46088746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:22,0 chr1 46088747 . C . PASS END=46088747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 46088748 . C . PASS END=46088748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46088749 . G . PASS END=46088781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:18,0 chr1 46088782 . G . PASS END=46088782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 46088783 . C . PASS END=46088797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,612:0,41,255:17,0 chr1 46088798 . A . PASS END=46088798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 46088799 . T . PASS END=46088811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 46088812 . A . PASS END=46088812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 46088813 . G . PASS END=46088827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 46088828 . A . PASS END=46088828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 46088829 . G . PASS END=46088835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 46088836 . C . PASS END=46088836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 46088837 . C . PASS END=46088838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 46088839 . A . PASS END=46088841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:13,0 chr1 46088842 . G . PASS END=46088850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,630:0,41,255:17,0 chr1 46088851 . A . PASS END=46088851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:16,0 chr1 46088852 . G . PASS END=46088870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:19,0 chr1 46088871 . G . PASS END=46088873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:22,0 chr1 46088874 . C . PASS END=46088874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 46088875 . C . PASS END=46088880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 46088881 . T . PASS END=46088881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 46088882 . C . PASS END=46088893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 46088894 . C . PASS END=46088894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 46088895 . C . PASS END=46088897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 46088898 . G . PASS END=46088898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 46088899 . T . PASS END=46088908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,986:0,78,255:26,0 chr1 46088909 . G . PASS END=46088924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr1 46088925 . C . PASS END=46088925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 46088926 . C . PASS END=46088935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46088936 . A . PASS END=46088945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 46088946 . C . PASS END=46088948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 46088949 . G . PASS END=46088950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:23,0 chr1 46088951 . G . PASS END=46088957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 46088958 . A . PASS END=46089029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:25,0 chr1 46089030 . G . PASS END=46089081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,568:0,48,255:19,0 chr1 46089082 . T . PASS END=46089082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 46089083 . T . PASS END=46089088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 46089089 . A . PASS END=46089108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,32,255:13,0 chr1 46089109 . C . PASS END=46089109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 46089110 . A . PASS END=46089111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 46089229 . C . PASS END=46089262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,997:0,80,255:36,0 chr1 46089263 . G . PASS END=46089304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1266:0,91,255:38,0 chr1 46089305 . T . PASS END=46089305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 46089306 . G . PASS END=46089324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:36:0,90,1350:0,95,255:34,0 chr1 46089408 . C . PASS END=46089413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 46089414 . C . PASS END=46089416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46089417 . C . PASS END=46089417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 46089418 . T . PASS END=46089456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1025:0,87,255:29,0 chr1 46089457 . A . PASS END=46089457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 46089458 . T . PASS END=46089459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 46089460 . T . PASS END=46089460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 46089461 . C . PASS END=46089469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 46089470 . G . PASS END=46089470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 46089471 . G . PASS END=46089505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 46089506 . A . PASS END=46089506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 46089507 . C . PASS END=46089516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 46089517 . G . PASS END=46089531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 46089532 . T . PASS END=46089551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:17:0,42,630:0,51,255:17,0 chr1 46089552 . G . PASS END=46089565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 46089566 . C . PASS END=46089567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 46089568 . G . PASS END=46089578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:10,0 chr1 46089579 . C . PASS END=46089581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46093928 . C . PASS END=46093930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 46093931 . C . PASS END=46093940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:23,0 chr1 46093941 . T . PASS END=46093941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 46093942 . C . PASS END=46093949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,878:0,69,255:26,0 chr1 46093950 . G . PASS END=46093950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 46093951 . A . PASS END=46093951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 46093952 . T . PASS END=46093954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:29,0 chr1 46093955 . T . PASS END=46093955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 46093956 . T . PASS END=46093966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 46093967 . G . PASS END=46093973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 46093974 . G . PASS END=46093974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46093975 . T . PASS END=46093975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 46093976 . G . PASS END=46093980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46093981 . A . PASS END=46093989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 46093990 . A . PASS END=46094026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,64,255:26,0 chr1 46094027 . A G, 47.82 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=0.250;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,10,0:0.400,0.000:25:8,5,0:7,5,0:47:83,0,50,357,528,885:255,0,255:13,0:4.7815e+01,9.3449e-05,5.3000e+01,3.5703e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,4,6:8,7,7,3 chr1 46094028 . C . PASS END=46094030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:20,0 chr1 46094031 . G . PASS END=46094031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 46094032 . A . PASS END=46094033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 46094034 . C . PASS END=46094036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46094037 . C . PASS END=46094038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 46094039 . G . PASS END=46094039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46094040 . C . PASS END=46094064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 46094065 . A . PASS END=46094069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 46094070 . T . PASS END=46094075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr1 46094076 . C . PASS END=46094080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 46095248 . C . PASS END=46095271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,153,255:40,0 chr1 46095272 . T C, 49.54 PASS DP=73;MQ=250.00;MQRankSum=7.223;ReadPosRankSum=2.139;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,33,0:0.465,0.000:71:15,13,0:23,20,0:48:84,0,50,1128,1338,2465:255,0,255:38,0:4.9535e+01,7.0152e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,10,21,12:13,25,15,18 chr1 46095273 . T . PASS END=46095309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,175,255:40,0 chr1 46095310 . C . PASS END=46095350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:73:0,120,1800:0,186,255:40,0 chr1 46096154 . C . PASS END=46096278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:37:0,93,1395:0,94,255:40,0 chr1 46099161 . A . PASS END=46099162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:27,0 chr1 46099163 . C . PASS END=46099166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 46099167 . C . PASS END=46099168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 46099169 . G . PASS END=46099169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 46099170 . C . PASS END=46099170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:30,0 chr1 46099171 . T . PASS END=46099294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:31:0,93,1166:0,93,255:40,0 chr1 46099295 . T . PASS END=46099295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1318:0,78,255:36,0 chr1 46099296 . T . PASS END=46099303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1335:0,95,255:36,0 chr1 46099304 . T . PASS END=46099304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:27,0 chr1 46099305 . G . PASS END=46099314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:29,0 chr1 46099315 . G . PASS END=46099319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 46099768 . C . PASS END=46099908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,101,1369:0,101,255:40,0 chr1 46105882 . C . PASS END=46105890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,639:0,57,255:19,0 chr1 46105891 . A . PASS END=46105902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 46105903 . C . PASS END=46105913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr1 46105914 . G . PASS END=46105914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 46105915 . G . PASS END=46105945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1150:0,93,255:36,0 chr1 46105946 . A . PASS END=46105946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr1 46105947 . A . PASS END=46105963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:36:0,95,1230:0,95,255:38,0 chr1 46105964 . T . PASS END=46105964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:37,0 chr1 46105965 . G . PASS END=46106074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1215:0,87,255:40,0 chr1 46106075 . T . PASS END=46106075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46108099 . C . PASS END=46108171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,105,1498:0,108,255:40,0 chr1 46120215 . A . PASS END=46120218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,975:0,87,255:31,0 chr1 46120219 . T . PASS END=46120219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1091:0,77,255:30,0 chr1 46120220 . C . PASS END=46120361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,986:0,84,255:40,0 chr1 46120362 . A . PASS END=46120364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 46120365 . A . PASS END=46120367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 46120368 . T . PASS END=46120368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1142:0,66,255:27,0 chr1 46120369 . T . PASS END=46120376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:28,0 chr1 46120377 . G . PASS END=46120397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 46120398 . G . PASS END=46120400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr1 46120401 . A . PASS END=46120403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:21,0 chr1 46120404 . C . PASS END=46120406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 46120407 . A . PASS END=46120407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,705:0,36,255:16,0 chr1 46120408 . C . PASS END=46120421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,759:0,47,255:19,0 chr1 46120422 . T . PASS END=46120438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:22,0 chr1 46120439 . C . PASS END=46120441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,56,255:19,0 chr1 46120442 . C . PASS END=46120442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 46120443 . C . PASS END=46120452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,729:0,47,255:19,0 chr1 46120453 . C . PASS END=46120453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:16,0 chr1 46120454 . C . PASS END=46120459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,659:0,41,255:17,0 chr1 46120460 . C . PASS END=46120460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 46120461 . C . PASS END=46120461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 46120462 . A . PASS END=46120462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 46120463 . C . PASS END=46120463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 46120464 . A . PASS END=46120464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 46120465 . G . PASS END=46120465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 46120466 . A . PASS END=46120467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 46120468 . T . PASS END=46120468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 46120469 . C . PASS END=46120471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 46120472 . G . PASS END=46120473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 46120474 . C . PASS END=46120474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 46120475 . G . PASS END=46120476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 46120477 . A . PASS END=46120496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,488:0,31,255:14,0 chr1 46120497 . A . PASS END=46120497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 46120498 . G . PASS END=46120499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 46120500 . A . PASS END=46120500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 46120501 . T . PASS END=46120501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 46120862 . C . PASS END=46120991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:32:0,86,1225:0,86,255:40,0 chr1 46124700 . C . PASS END=46124700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,148,255:40,0 chr1 46124701 . T . PASS END=46124759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,111,1665:0,125,255:40,0 chr1 46156741 . A . PASS END=46156782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,124,255:40,0 chr1 46158876 . A . PASS END=46158878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 46158879 . C . PASS END=46158899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:26,0 chr1 46158900 . G . PASS END=46158905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:29,0 chr1 46158906 . A . PASS END=46158906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 46158907 . G . PASS END=46158914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:30,0 chr1 46158915 . A . PASS END=46158915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 46158916 . G . PASS END=46158923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1133:0,90,255:33,0 chr1 46158924 . A . PASS END=46158924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:32,0 chr1 46158925 . T . PASS END=46158945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:33:0,85,1142:0,85,255:37,0 chr1 46158946 . T . PASS END=46158946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr1 46158947 . C . PASS END=46159163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:38:0,90,1440:0,90,255:40,0 chr1 46159164 . C . PASS END=46159166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:39:0,72,1080:0,101,255:25,0 chr1 46159167 . C . PASS END=46159168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:43:0,84,1260:0,129,255:28,0 chr1 46159169 . A . PASS END=46159171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:72:41:0,72,1080:0,123,255:25,0 chr1 46159172 . G . PASS END=46159180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:33:0,84,1233:0,89,255:30,0 chr1 46159181 . G . PASS END=46159181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 46159182 . A . PASS END=46159183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 46159184 . G . PASS END=46159184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 46159185 . A . PASS END=46159188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46159189 . A . PASS END=46159189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 46159190 . A . PASS END=46159211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:31,0 chr1 46159212 . T . PASS END=46159212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr1 46159213 . T . PASS END=46159219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 46159220 . G . PASS END=46159220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46159221 . A . PASS END=46159233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 46159234 . C . PASS END=46159235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 46159236 . A . PASS END=46159250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1131:0,80,255:31,0 chr1 46159251 . T . PASS END=46159251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 46159252 . T . PASS END=46159577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:30:0,81,1125:0,83,255:40,0 chr1 46160090 . T . PASS END=46160187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,112,1800:0,112,255:40,0 chr1 46165638 . T . PASS END=46165832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:90:30:0,90,1125:0,90,255:40,1 chr1 46165833 . T . PASS END=46165846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:42:0,81,1215:0,116,255:38,0 chr1 46165847 . C . PASS END=46165856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:60:34:0,60,900:0,102,255:26,0 chr1 46165857 . C . PASS END=46165862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:48:32:0,48,720:0,86,255:17,0 chr1 46177903 . T . PASS END=46177912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:32,0 chr1 46177913 . C . PASS END=46177913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:31,0 chr1 46177914 . T . PASS END=46177914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1055:0,49,255:30,0 chr1 46177915 . G . PASS END=46177919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1138:0,83,255:34,0 chr1 46177920 . G . PASS END=46177923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,85,255:28,0 chr1 46177924 . A . PASS END=46177924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1135:0,61,255:29,0 chr1 46177925 . G . PASS END=46177936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,100,255:30,0 chr1 46177937 . C . PASS END=46177955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:63:41:0,63,945:0,107,255:26,0 chr1 46177956 . A . PASS END=46177963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:42:43:0,42,630:0,115,255:18,0 chr1 46177964 . G . PASS END=46177968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:39:41:0,39,585:0,109,255:13,0 chr1 46179918 . C . PASS END=46179918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,975:0,87,255:29,0 chr1 46179919 . T . PASS END=46179919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 46179920 . C . PASS END=46179925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 46179926 . A . PASS END=46179927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr1 46179928 . G . PASS END=46179941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1073:0,80,255:32,0 chr1 46179942 . A . PASS END=46179942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 46179943 . G . PASS END=46180128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:30:0,84,1241:0,86,255:40,0 chr1 46180129 . T . PASS END=46180138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 46182567 . C . PASS END=46182689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:93:38:0,93,1335:0,97,255:40,0 chr1 46184875 . C . PASS END=46184879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:34,0 chr1 46184880 . G . PASS END=46184880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 46184881 . C . PASS END=46185012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:87:37:0,87,1388:0,87,255:40,2 chr1 46193303 . C . PASS END=46193308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:28,0 chr1 46193309 . T . PASS END=46193309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 46193310 . A . PASS END=46193352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:31:0,90,1256:0,93,255:39,0 chr1 46193353 . C . PASS END=46193353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 46193354 . G . PASS END=46193449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,99,255:40,0 chr1 46193450 . C . PASS END=46193465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:28:0,63,945:0,83,255:26,0 chr1 46193466 . T . PASS END=46193470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,72,255:18,0 chr1 46195286 . C . PASS END=46195287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 46195288 . A . PASS END=46195294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:24,0 chr1 46195295 . A . PASS END=46195295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 46195296 . C . PASS END=46195298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:26,0 chr1 46195299 . G . PASS END=46195307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 46195308 . T . PASS END=46195309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 46195310 . C . PASS END=46195337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,993:0,84,255:37,0 chr1 46195338 . C . PASS END=46195374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,100,1352:0,100,255:39,0 chr1 46195375 . T C, 40.41 PASS DP=39;MQ=250.00;MQRankSum=5.020;ReadPosRankSum=3.232;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,13,0:0.333,0.000:39:12,6,0:14,7,0:40:75,0,50,465,930,1395:255,0,255:23,0:4.0406e+01,4.1730e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,17,6,7:15,11,9,4 chr1 46195376 . T . PASS END=46195394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:33:0,87,1305:0,99,255:35,0 chr1 46195395 . T . PASS END=46195395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 46195396 . T . PASS END=46195412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,987:0,80,255:29,0 chr1 46195413 . T . PASS END=46195417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 46195418 . C . PASS END=46195436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,68,255:26,0 chr1 46195437 . T . PASS END=46195441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:21:0,45,675:0,53,255:15,0 chr1 46206573 . C . PASS END=46206577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,102,1272:0,102,255:39,0 chr1 46206578 . A . PASS END=46207004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:39:0,83,1147:0,83,255:40,0 chr1 46211792 . C . PASS END=46211816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,946:0,85,255:35,0 chr1 46211817 . C . PASS END=46211817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:32,0 chr1 46211818 . T . PASS END=46211919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:35:0,90,1299:0,90,255:40,2 chr1 46211920 . A . PASS END=46211920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1543:0,66,255:35,2 chr1 46211921 . A . PASS END=46212015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:39:0,82,1252:0,82,255:40,0 chr1 46212016 . A . PASS END=46212016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1183:0,48,255:34,0 chr1 46212017 . T . PASS END=46212044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1249:0,89,255:36,0 chr1 46212045 . A . PASS END=46212045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1125:0,50,255:31,0 chr1 46212046 . G . PASS END=46212066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1294:0,89,255:35,0 chr1 46212067 . C . PASS END=46212076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:24,0 chr1 46212077 . T . PASS END=46212083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:19,0 chr1 46269568 . A . LowDepth;LowGQ END=46269625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 46269626 . A . LowGQ END=46269668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,11:3,0 chr1 46269669 . G . PASS END=46269669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 46269670 . C . LowGQ END=46269670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 46269671 . G . PASS END=46269672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 46269673 . C . LowGQ END=46269673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 46269674 . G . PASS END=46269675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 46269676 . C . LowGQ END=46269676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,86:19,0,104:3,0 chr1 46269677 . G . PASS END=46269677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 46269678 . A . LowGQ END=46269678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 46269679 . G . PASS END=46269679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 46269680 . C . LowGQ END=46269680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 46269681 . G . PASS END=46269683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 46269684 . G . LowGQ END=46269684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 46269685 . C . PASS END=46269685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 46269686 . C . LowGQ END=46269687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:5,0,74:3,0 chr1 46269688 . G . PASS END=46269690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 46269691 . A . LowGQ END=46269691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:27,0,82:3,0 chr1 46269692 . G . PASS END=46269694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 46269695 . A . LowGQ END=46269695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,2:4:0:4:0,0,22:21,0,44:2,0 chr1 46269696 . G . PASS END=46269696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 46269697 . C . LowGQ END=46269697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,2:4:0:4:0,0,0:43,0,43:2,0 chr1 46269698 . G . PASS END=46269698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 46269699 . G . LowGQ END=46269731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,1:4:0:4:0,0,0:0,0,0:4,1 chr1 46269732 . G . PASS END=46269736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 46269737 . A . LowGQ END=46269737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,2:4:0:4:0,0,45:21,0,66:2,0 chr1 46269738 . G . PASS END=46269742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 46269743 . A . LowGQ END=46269743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 46269744 . G . PASS END=46269744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 46278673 . A . PASS END=46278699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,121,255:40,0 chr1 46290105 . G . PASS END=46290248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:80:30:0,80,1064:0,80,255:40,0 chr1 46290249 . T . PASS END=46290252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,79,255:26,0 chr1 46295111 . G . PASS END=46295112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 46295113 . A . PASS END=46295113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 46295114 . A . PASS END=46295129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,604:0,48,255:19,0 chr1 46295130 . G . PASS END=46295137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:26,0 chr1 46295138 . G . PASS END=46295225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1141:0,90,255:40,0 chr1 46295226 . G . PASS END=46295227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 46295228 . C . PASS END=46295230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 46295231 . C . PASS END=46295246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 46295247 . T . PASS END=46295253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:22:0,57,855:0,66,255:19,0 chr1 46330773 . A . PASS END=46330774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:67:0,120,1800:0,167,255:40,0 chr1 46330775 . G . PASS END=46330775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,9:66:26:66:0,26,1754:0,26,255:40,0 chr1 46330776 . G . PASS END=46330782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:67:0,107,1800:0,107,255:40,0 chr1 46330783 . C . LowGQ END=46330783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,12:71:0:71:0,0,1742:37,0,255:40,0 chr1 46330784 . C . PASS END=46330790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,113,1800:0,113,255:40,0 chr1 46330791 . C . PASS END=46330791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,9:70:10:70:0,10,1889:0,10,255:40,0 chr1 46330792 . T . PASS END=46330797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,5:70:99:70:0,120,1800:0,127,255:40,0 chr1 46330798 . G . PASS END=46330798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,6:70:74:70:0,74,2053:0,74,255:40,0 chr1 46330799 . G . PASS END=46330808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:68:0,110,1800:0,110,255:40,0 chr1 46330809 . C . PASS END=46330809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:76:68:0,76,2059:0,76,255:40,0 chr1 46330810 . A . PASS END=46330811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:99:68:0,106,1800:0,106,255:40,0 chr1 46348036 . A . PASS END=46348067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:81:0,120,1800:0,178,255:40,0 chr1 46379502 . A . PASS END=46379517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:59:0,120,1800:0,142,255:40,0 chr1 46379518 . A G, 50.00 PASS DP=64;MQ=249.91;MQRankSum=6.838;ReadPosRankSum=4.612;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,35,0:0.547,0.000:64:16,22,0:13,13,0:48:85,0,49,1221,1033,2254:255,0,255:29,0:5.0000e+01,6.9116e-05,5.2285e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,14,23,12:14,15,22,13 chr1 46379519 . A . PASS END=46379555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,170,255:40,0 chr1 46379556 . G . PASS END=46379559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,4:67:99:66:0,120,1800:0,135,255:40,0 chr1 46383011 . A . PASS END=46383173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:34:0,81,1215:0,102,255:40,0 chr1 46383174 . A . PASS END=46383185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:24,0 chr1 46383186 . A . PASS END=46383186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 46383187 . G . PASS END=46383189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 46383190 . G . PASS END=46383205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:19,0 chr1 46397929 . A . PASS END=46397945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:102:0,120,1800:0,255,255:40,0 chr1 46420097 . A . PASS END=46420110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,197,255:40,0 chr1 46425058 . T . PASS END=46425141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:32:0,85,1166:0,85,255:40,0 chr1 46425142 . C . PASS END=46425149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 46463396 . G . PASS END=46463471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,155,255:40,0 chr1 46466631 . C . PASS END=46466651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,180,255:40,0 chr1 46468477 . G . PASS END=46468555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:40:0,96,1440:0,96,255:40,0 chr1 46471913 . T . PASS END=46471927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1141:0,93,255:31,0 chr1 46471928 . C . PASS END=46471929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 46471930 . G . PASS END=46472043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:30:0,81,1125:0,83,255:40,0 chr1 46472044 . G . PASS END=46472044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 46472045 . C . PASS END=46472049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:31,0 chr1 46472050 . T . PASS END=46472050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 46472051 . C . PASS END=46472058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 46472059 . G . PASS END=46472067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 46473968 . T . PASS END=46474043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,120,255:40,0 chr1 46476402 . G . PASS END=46476404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 46476405 . A . PASS END=46476405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr1 46476406 . C . PASS END=46476425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:26,0 chr1 46476426 . C . PASS END=46476549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1215:0,84,255:40,0 chr1 46476550 . G . PASS END=46476559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1435:0,93,255:40,0 chr1 46476560 . A . PASS END=46476560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1394:0,79,255:31,0 chr1 46476561 . T . PASS END=46476577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,90,255:34,0 chr1 46476578 . A . PASS END=46476578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,1021:0,54,255:28,0 chr1 46476579 . C . PASS END=46476586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 46476587 . T G, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.805;ReadPosRankSum=1.715;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:5,7,0:11,9,0:48:85,0,50,572,486,1058:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,6,10:10,6,9,7 chr1 46476588 . A . PASS END=46476596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1098:0,63,255:25,0 chr1 46476597 . A . PASS END=46476597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,950:0,37,255:25,0 chr1 46476598 . A . PASS END=46476600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:42:27:0,42,961:0,42,255:26,0 chr1 46476601 . T . PASS END=46476609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:26,0 chr1 46476610 . A . PASS END=46476610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:20,0 chr1 46476611 . T . PASS END=46476611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 46485268 . G . PASS END=46485314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,568:0,44,255:19,0 chr1 46485315 . G . PASS END=46485319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 46485320 . A . PASS END=46485320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 46485321 . A . PASS END=46485360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:23,0 chr1 46485361 . G . PASS END=46485369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 46487622 . G . PASS END=46487732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1032:0,84,255:38,0 chr1 46487733 . C . PASS END=46487746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr1 46487747 . C . PASS END=46487754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,806:0,53,255:19,0 chr1 46488582 . A . PASS END=46488643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,150,255:40,0 chr1 46488905 . G . PASS END=46488908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1008:0,75,255:26,0 chr1 46488909 . A . PASS END=46488956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,980:0,81,255:38,0 chr1 46488957 . A . PASS END=46488957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 46488958 . G . PASS END=46488990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1208:0,81,255:39,0 chr1 46489444 . G . PASS END=46489639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1158:0,83,255:40,0 chr1 46489640 . G . PASS END=46489652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:24,0 chr1 46491349 . G . PASS END=46491487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,103,1320:0,103,255:40,0 chr1 46493403 . C . PASS END=46493403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46493404 . C . PASS END=46493535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:28:0,83,1055:0,83,255:40,0 chr1 46494440 . G . PASS END=46494449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 46494450 . C . PASS END=46494459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:19,0 chr1 46494460 . C . PASS END=46494462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 46494463 . T . PASS END=46494463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 46494464 . G . PASS END=46494536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:24,0 chr1 46494537 . A . PASS END=46494537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 46494538 . G . PASS END=46494557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:23,0 chr1 46494558 . C . PASS END=46494558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 46494559 . T . PASS END=46494569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 46494570 . A . PASS END=46494593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:40:19:0,40,629:0,40,255:19,0 chr1 46494594 . A . PASS END=46494602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:13,0 chr1 46494603 . G . PASS END=46494605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:18:0,24,360:0,54,255:8,0 chr1 46495138 . A . PASS END=46495143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,893:0,64,255:25,0 chr1 46495144 . T . PASS END=46495144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:25,0 chr1 46495145 . T . PASS END=46495145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 46495146 . G . PASS END=46495146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46495147 . T . PASS END=46495147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 46495148 . G . PASS END=46495148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 46495149 . T . PASS END=46495149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:28,0 chr1 46495150 . G . PASS END=46495239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1086:0,80,255:40,0 chr1 46495503 . G . PASS END=46495625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:35:0,99,1485:0,105,255:40,0 chr1 46495801 . C . PASS END=46495908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:29:0,81,1215:0,87,255:40,0 chr1 46495909 . A . PASS END=46495909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:27,0 chr1 46495910 . G . PASS END=46495910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 46496279 . G . PASS END=46496280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 46496281 . G . PASS END=46496316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 46496317 . G . PASS END=46496320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 46496321 . C . PASS END=46496321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:26,0 chr1 46496322 . G . PASS END=46496326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,993:0,84,255:28,0 chr1 46496327 . C . PASS END=46496327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 46496328 . C . PASS END=46496350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1063:0,84,255:35,0 chr1 46496351 . A . PASS END=46496351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr1 46496352 . G . PASS END=46496360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 46496361 . A . PASS END=46496361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr1 46496362 . G . PASS END=46496363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr1 46496364 . A . PASS END=46496364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 46496365 . G . PASS END=46496365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 46496366 . G . PASS END=46496366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1128:0,53,255:28,0 chr1 46496367 . A . PASS END=46496371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 46496372 . T . PASS END=46496372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:30,0 chr1 46496373 . C . PASS END=46496384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1227:0,88,255:34,0 chr1 46496385 . C . PASS END=46496385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:32,0 chr1 46496386 . A . PASS END=46496409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:33,0 chr1 46496410 . C . PASS END=46496410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:27,0 chr1 46496411 . T . PASS END=46496412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 46496413 . G . PASS END=46496413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 46496414 . G . PASS END=46496414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 46496415 . T . PASS END=46496423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:29:0,63,945:0,71,255:27,0 chr1 46496424 . C . PASS END=46496430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 46496431 . G . PASS END=46496431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:19,0 chr1 46496432 . A . PASS END=46496433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:20,0 chr1 46496679 . A . PASS END=46496696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr1 46496697 . G . PASS END=46496708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 46496709 . A G, 77.11 PASS DP=10;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,6,0:0,4,0:27:115,30,0,387,30,387:255,30,0:0,0:7.7106e+01,2.7106e+01,8.4686e-03,3.8351e+02,6.1876e+01,3.8651e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,4:0,0,4,6 chr1 46496710 . T . PASS END=46496710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 46496711 . C . PASS END=46496712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 46496713 . C . PASS END=46496713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 46496714 . A . PASS END=46496735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 46496736 . T . PASS END=46496737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 46496738 . C . PASS END=46496742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 46496743 . A . PASS END=46496743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:11,0 chr1 46496744 . C . PASS END=46496746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 46496747 . T . PASS END=46496747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 46496748 . G . PASS END=46496748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 46496749 . C . PASS END=46496749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:11,0 chr1 46496750 . G . PASS END=46496750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 46496751 . A . PASS END=46496751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 46496752 . C . PASS END=46496752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 46496753 . G . LowGQ END=46496753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 46496754 . C . PASS END=46496755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 46496756 . G . PASS END=46496756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 46496757 . C . PASS END=46496758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 46496759 . G . PASS END=46496764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46496765 . G . PASS END=46496765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 46496766 . C . PASS END=46496771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 46496772 . G . PASS END=46496772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 46496773 . G . PASS END=46496779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 46496780 . C . PASS END=46496781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 46496782 . C . PASS END=46496782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 46496783 . G . PASS END=46496783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 46496784 . G . PASS END=46496785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 46496786 . T . PASS END=46496786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 46496787 . C . PASS END=46496789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 46496790 . G . PASS END=46496790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:9,0 chr1 46496791 . G . PASS END=46496804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 46496805 . G . PASS END=46496821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:17,0 chr1 46496822 . G . PASS END=46496822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 46496823 . G . PASS END=46496834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:19,0 chr1 46496835 . G . PASS END=46496836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 46496837 . A . PASS END=46496838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46496839 . G . PASS END=46496844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 46496845 . T . PASS END=46496845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 46496846 . G . PASS END=46496848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 46496849 . T . PASS END=46496849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 46496850 . C . PASS END=46496857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 46496858 . C . PASS END=46496858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 46496859 . C . PASS END=46496862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 46496863 . T . PASS END=46496863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 46496864 . C . PASS END=46496864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 46496865 . T . PASS END=46496865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 46496866 . G . PASS END=46496871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 46496872 . G . PASS END=46496872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 46496873 . G . PASS END=46496873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 46496874 . G . PASS END=46496880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 46496881 . G . PASS END=46496882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:19,0 chr1 46496883 . G . PASS END=46496896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,751:0,47,255:19,0 chr1 46496897 . A . PASS END=46496897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:18,0 chr1 46496898 . C . PASS END=46496899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr1 46496900 . C . PASS END=46496902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 46496903 . G . PASS END=46496903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 46496904 . G . PASS END=46496906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 46496907 . G . PASS END=46496907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 46496908 . C . PASS END=46496918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 46496919 . G . PASS END=46496919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 46496920 . C . PASS END=46496922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 46496923 . G . PASS END=46496923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 46496924 . A . PASS END=46496955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 46496956 . A . PASS END=46496962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,53,255:19,0 chr1 46497063 . C . PASS END=46497083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:19,0 chr1 46497084 . G . PASS END=46497100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:25,0 chr1 46497101 . G . PASS END=46497101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 46497102 . A . PASS END=46497122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,955:0,75,255:26,0 chr1 46497123 . T . PASS END=46497130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 46497131 . C . PASS END=46497138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,986:0,67,255:26,0 chr1 46497139 . G . PASS END=46497141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46497142 . T . PASS END=46497150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 46497151 . C . PASS END=46497152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46497153 . A . PASS END=46497168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 46497169 . G . PASS END=46497171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 46497172 . C . PASS END=46497173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46497174 . C . PASS END=46497177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 46497178 . A . PASS END=46497178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:27,0 chr1 46497179 . G . PASS END=46497185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46497186 . G . PASS END=46497192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:26,0 chr1 46497193 . T . PASS END=46497193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 46497194 . C . PASS END=46497195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 46497196 . C . PASS END=46497198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 46497199 . T . PASS END=46497199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 46497200 . G . PASS END=46497203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 46497204 . A . PASS END=46497204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,969:0,76,255:27,0 chr1 46497205 . C . PASS END=46497217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 46497218 . T . PASS END=46497218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 46497219 . C . PASS END=46497219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46497220 . C . PASS END=46497220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 46497221 . G . PASS END=46497221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46497222 . C . PASS END=46497222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 46497223 . C . PASS END=46497228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 46497229 . C . PASS END=46497244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,976:0,68,255:26,0 chr1 46497245 . C . PASS END=46497245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 46497246 . T . PASS END=46497252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 46497253 . T . PASS END=46497253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,680:0,52,255:22,0 chr1 46497254 . T . PASS END=46497254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr1 46497255 . C . PASS END=46497256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 46497257 . G . PASS END=46497257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:21,0 chr1 46497850 . A . PASS END=46497850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:18,0 chr1 46497851 . A . PASS END=46497869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:25,0 chr1 46497870 . T . PASS END=46497870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr1 46497871 . T . PASS END=46497871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 46497872 . G . PASS END=46497899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:30,0 chr1 46497900 . T . PASS END=46497900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 46497901 . C . PASS END=46497911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1163:0,90,255:30,0 chr1 46497912 . T . PASS END=46497912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 46497913 . C . PASS END=46497923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 46497924 . T . PASS END=46497926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr1 46497927 . T . PASS END=46497929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 46497930 . C . PASS END=46497932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46497933 . A . PASS END=46497942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:28,0 chr1 46497943 . T . PASS END=46497943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:27,0 chr1 46497944 . C . PASS END=46497955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1063:0,84,255:30,0 chr1 46497956 . T . PASS END=46497966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1033:0,73,255:26,0 chr1 46497967 . G . PASS END=46497967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 46497968 . G . PASS END=46497987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:24:0,67,915:0,67,255:25,0 chr1 46497988 . G . PASS END=46497988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 46497989 . A . PASS END=46498005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,897:0,62,255:26,0 chr1 46498006 . G . PASS END=46498011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46498012 . C . PASS END=46498013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 46498014 . C . PASS END=46498020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 46498021 . C . PASS END=46498021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 46498022 . C . PASS END=46498046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 46498047 . G . PASS END=46498051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 46498052 . C . PASS END=46498052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 46498053 . T . PASS END=46498073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,803:0,69,255:26,0 chr1 46498074 . T . PASS END=46498074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:19,0 chr1 46498075 . G . PASS END=46498076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 46498268 . C . PASS END=46498310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1341:0,87,255:40,0 chr1 46498311 . A . PASS END=46498311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1443:0,60,255:40,0 chr1 46498312 . A . PASS END=46498328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:42:0,82,1482:0,82,255:40,0 chr1 46498329 . A . PASS END=46498329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:38,0 chr1 46498330 . T . PASS END=46498334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:41:0,84,1413:0,84,255:40,0 chr1 46498335 . A . PASS END=46498335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1205:0,51,255:36,0 chr1 46498336 . T . PASS END=46498337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 46498338 . G . PASS END=46498374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1258:0,89,255:39,0 chr1 46498375 . A G, 48.36 PASS DP=32;MQ=248.82;MQRankSum=3.943;ReadPosRankSum=2.502;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,13,0:0.419,0.000:31:5,6,0:13,7,0:47:83,0,50,465,607,1072:255,0,255:18,0:4.8363e+01,8.5166e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,13,6,7:10,8,7,6 chr1 46498376 . G . PASS END=46498377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 46498378 . G . PASS END=46498378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46498379 . C . PASS END=46498387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46498388 . A . PASS END=46498390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 46499474 . A . PASS END=46499610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:35:0,90,1388:0,90,255:40,0 chr1 46499745 . C . PASS END=46499747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46499748 . A . PASS END=46499748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 46499749 . A . PASS END=46499778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:32,0 chr1 46499779 . A . PASS END=46499779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 46499780 . A . PASS END=46499844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1192:0,83,255:35,0 chr1 46499845 . G . PASS END=46499846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:25,0 chr1 46499847 . G . PASS END=46499848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 46499849 . G . PASS END=46499849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 46499850 . T . PASS END=46499856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 46499857 . G . PASS END=46499857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:27,0 chr1 46499858 . G . PASS END=46499873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,70,255:25,0 chr1 46499874 . C . PASS END=46499874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 46499875 . C . PASS END=46499875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 46499876 . A . PASS END=46499876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 46499877 . C . PASS END=46499884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 46499885 . C . PASS END=46499885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 46499886 . C . PASS END=46499890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:21,0 chr1 46499891 . G . PASS END=46499891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 46499892 . A . PASS END=46499897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,679:0,63,255:21,0 chr1 46499898 . C . PASS END=46499898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 46499899 . A . PASS END=46499900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 46499901 . T . PASS END=46499901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 46499902 . C . PASS END=46499908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 46499909 . A . PASS END=46499938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,660:0,43,255:19,0 chr1 46500210 . T . PASS END=46500278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,713:0,60,255:24,0 chr1 46500279 . A . PASS END=46500279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 46500280 . C . PASS END=46500320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,884:0,69,255:25,0 chr1 46500321 . A . PASS END=46500324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:19,0 chr1 46500325 . C . PASS END=46500336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:23,0 chr1 46500337 . T . PASS END=46500337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 46500338 . C . PASS END=46500348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 46500349 . G . PASS END=46500359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 46500360 . G . PASS END=46500377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 46500378 . T . PASS END=46500378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 46500379 . G . PASS END=46500382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 46500383 . C . PASS END=46500383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 46500384 . A . PASS END=46500385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 46500386 . A . PASS END=46500391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 46500392 . T . PASS END=46500392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:16,0 chr1 46500393 . C . PASS END=46500406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,601:0,54,255:18,0 chr1 46500407 . A . PASS END=46500407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 46500408 . C . PASS END=46500417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,631:0,54,255:18,0 chr1 46500418 . T . PASS END=46500418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,587:0,10,255:15,0 chr1 46500419 . C . PASS END=46500431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 46500432 . C . PASS END=46500432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:17,0 chr1 46500433 . G . PASS END=46500438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,660:0,43,255:19,0 chr1 46500439 . G . PASS END=46500447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 46500448 . T . PASS END=46500448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 46500449 . G . PASS END=46500451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:21,0 chr1 46500452 . G . PASS END=46500452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 46500453 . C . PASS END=46500454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 46500455 . C . PASS END=46500458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 46500459 . C . PASS END=46500459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:19,0 chr1 46500460 . C . PASS END=46500461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:20,0 chr1 46500462 . T . PASS END=46500465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 46500466 . C . PASS END=46500466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:17,0 chr1 46500467 . A . PASS END=46500483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,682:0,44,255:19,0 chr1 46500484 . A . PASS END=46500488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:23,0 chr1 46500489 . C . PASS END=46500490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 46500491 . C . PASS END=46500497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 46500498 . G . PASS END=46500498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 46500499 . G . PASS END=46500503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:22,0 chr1 46500504 . T . PASS END=46500504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,689:0,27,255:21,0 chr1 46500505 . C . PASS END=46500508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 46500509 . C . PASS END=46500510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 46500511 . G . PASS END=46500528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,878:0,61,255:22,0 chr1 46500529 . A . PASS END=46500529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 46500530 . C . PASS END=46500536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,861:0,69,255:26,0 chr1 46500537 . C . PASS END=46500541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 46500542 . C . PASS END=46500543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46500544 . A . PASS END=46500568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:30,0 chr1 46500569 . A . PASS END=46500569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 46500570 . A . PASS END=46500575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:31,0 chr1 46500576 . C . PASS END=46500590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1180:0,80,255:31,0 chr1 46500591 . C . PASS END=46500591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46500592 . C . PASS END=46500598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 46500599 . A . PASS END=46500599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr1 46500600 . A . PASS END=46500601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 46500602 . A . PASS END=46500605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46500606 . T . PASS END=46500606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr1 46500607 . A . PASS END=46500612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 46500613 . T C, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.468;ReadPosRankSum=2.211;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:8,11,0:5,4,0:48:85,0,50,536,465,1001:255,0,255:13,0:5.0000e+01,6.6786e-05,5.2686e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,10,5:12,1,10,5 chr1 46500614 . T . PASS END=46500614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,825:0,28,255:23,0 chr1 46500615 . C . PASS END=46500618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 46500619 . C . PASS END=46500620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46500621 . A . PASS END=46500621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 46500622 . G . PASS END=46500625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 46500626 . A . PASS END=46500626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 46500627 . G . PASS END=46500646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1208:0,83,255:29,0 chr1 46500647 . G . PASS END=46500647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 46500648 . A . PASS END=46500650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46500651 . T . PASS END=46500652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46500653 . A . PASS END=46500653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:25,0 chr1 46500654 . A . PASS END=46500659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,954:0,67,255:26,0 chr1 46500660 . A . PASS END=46500664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 46500665 . C . PASS END=46500671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,976:0,68,255:26,0 chr1 46500672 . G . PASS END=46500672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:24,0 chr1 46500673 . G . PASS END=46500685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr1 46500686 . C . PASS END=46500694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:53:23:0,53,806:0,53,255:19,0 chr1 46500695 . G . PASS END=46500706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,869:0,63,255:23,0 chr1 46500707 . A . PASS END=46500724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:23,0 chr1 46500725 . G . PASS END=46500725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 46500726 . G . PASS END=46500740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,809:0,66,255:23,0 chr1 46500741 . A . PASS END=46500741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 46500742 . G . PASS END=46500743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 46500744 . G C, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=2.655;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:7,10,0:4,4,0:48:85,0,49,493,393,886:255,0,255:8,0:5.0000e+01,6.9375e-05,5.2216e+01,4.5000e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,8,7,7:3,8,7,7 chr1 46500745 . G . PASS END=46500769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,831:0,69,255:23,0 chr1 46500770 . G . PASS END=46500770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 46500771 . C . PASS END=46500780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 46500781 . C . PASS END=46500781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 46500782 . C . PASS END=46500782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46500783 . T . PASS END=46500784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 46500785 . C . PASS END=46500785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46500786 . G . PASS END=46500800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,721:0,57,255:19,0 chr1 46500801 . A . PASS END=46500801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 46500802 . A . PASS END=46500802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46500803 . C . PASS END=46500833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,807:0,63,255:26,0 chr1 46500834 . T . PASS END=46500834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,825:0,39,255:25,0 chr1 46500835 . T . PASS END=46500841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,941:0,78,255:26,0 chr1 46500842 . G . PASS END=46500843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46500844 . G . PASS END=46500845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46500846 . A . PASS END=46500882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr1 46500883 . C . PASS END=46500883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 46500884 . A . PASS END=46500915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 46500916 . T . PASS END=46500917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46500918 . A . PASS END=46500918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 46500919 . C . PASS END=46500919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46500920 . C . PASS END=46500926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 46500927 . T . PASS END=46500927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 46500928 . G . PASS END=46500934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:29,0 chr1 46500935 . A . PASS END=46500935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:27,0 chr1 46500936 . G . PASS END=46500938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 46500939 . T . PASS END=46500942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46500943 . C . PASS END=46500947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 46500948 . A . PASS END=46500952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 46500953 . G . PASS END=46500953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46500954 . C . PASS END=46500983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,870:0,72,255:26,0 chr1 46500984 . C . PASS END=46500984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 46500985 . G . PASS END=46500988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 46500989 . A . PASS END=46500993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,55,255:17,0 chr1 46500994 . C . PASS END=46500994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 46500995 . C . PASS END=46500995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:19,0 chr1 46500996 . C . PASS END=46500997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 46500998 . A . PASS END=46501000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 46501001 . A . PASS END=46501008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 46501009 . C . PASS END=46501009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 46501010 . C . PASS END=46501014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 46501015 . G . PASS END=46501116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,698:0,51,255:19,0 chr1 46501117 . T . PASS END=46501125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 46501126 . C . PASS END=46501142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 46501143 . A . PASS END=46501149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 46501150 . T . PASS END=46501152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 46501153 . G . PASS END=46501167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 46501168 . C . PASS END=46501168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 46501169 . C . PASS END=46501203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr1 46501204 . C . PASS END=46501212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46501213 . C . PASS END=46501215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46501216 . G . PASS END=46501259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1049:0,84,255:35,0 chr1 46501260 . C . PASS END=46501260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr1 46501261 . C . PASS END=46501290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,95,255:35,0 chr1 46501291 . T . PASS END=46501293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:26,0 chr1 46501294 . G . PASS END=46501328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr1 46501329 . A . PASS END=46501330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:21,0 chr1 46501331 . G . PASS END=46501341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:29,0 chr1 46501342 . G . PASS END=46501350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 46501351 . A . PASS END=46501390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:30,0 chr1 46501391 . C . PASS END=46501391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 46501392 . A . PASS END=46501402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 46501403 . A . PASS END=46501409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46501410 . C . PASS END=46501417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr1 46501418 . C . PASS END=46501419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46501420 . G . PASS END=46501420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:26,0 chr1 46501421 . C . PASS END=46501426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46501427 . A . PASS END=46501427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 46501428 . A . PASS END=46501429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 46501430 . C . PASS END=46501430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 46501431 . T . PASS END=46501432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 46501433 . T . PASS END=46501433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,954:0,57,255:28,0 chr1 46501434 . C . PASS END=46501443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr1 46501444 . G . PASS END=46501446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 46501447 . G . PASS END=46501453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 46501454 . A . PASS END=46501454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:28,0 chr1 46501455 . C . PASS END=46501470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:31,0 chr1 46501471 . C . PASS END=46501481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1070:0,74,255:26,0 chr1 46501482 . C . PASS END=46501483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46501484 . C . PASS END=46501496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 46501497 . A . PASS END=46501497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 46501498 . G . PASS END=46501539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,861:0,62,255:24,0 chr1 46501540 . A . PASS END=46501540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 46501541 . G . PASS END=46501583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 46501584 . A . PASS END=46501586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 46501587 . C . PASS END=46501589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46501590 . C . PASS END=46501601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:18,0 chr1 46501602 . G . PASS END=46501605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 46501606 . G . PASS END=46501621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 46501622 . G . PASS END=46501643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:26,0 chr1 46501644 . C . PASS END=46501650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 46501651 . C . PASS END=46501665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 46501666 . C . PASS END=46501667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 46501668 . A . PASS END=46501669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46501670 . G . PASS END=46501678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46501679 . G . PASS END=46501683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 46501684 . T . PASS END=46501684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:22,0 chr1 46501685 . C . PASS END=46501691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:24,0 chr1 46501692 . A . PASS END=46501692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 46501693 . T . PASS END=46501738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,854:0,66,255:24,0 chr1 46509345 . T . PASS END=46509348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr1 46509349 . C . PASS END=46509357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:23,0 chr1 46509358 . G . PASS END=46509358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 46509359 . A . PASS END=46509363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:26,0 chr1 46509364 . A . PASS END=46509376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:31,0 chr1 46509377 . C . PASS END=46509377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr1 46509378 . A . PASS END=46509460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1156:0,86,255:36,0 chr1 46509461 . A . PASS END=46509461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:28,0 chr1 46509462 . G . PASS END=46509471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,89,255:30,0 chr1 46509472 . T . PASS END=46509485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:27:0,68,976:0,68,255:26,0 chr1 46509486 . A . PASS END=46509486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:24,0 chr1 46509487 . A . PASS END=46509502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:26:0,63,945:0,68,255:25,0 chr1 46509503 . C . PASS END=46509516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:22:0,48,720:0,59,255:19,0 chr1 46509517 . A . PASS END=46509523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:21:0,36,540:0,63,255:13,0 chr1 46509524 . G . PASS END=46509533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,559:0,45,255:15,0 chr1 46509534 . C . PASS END=46509534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 46509535 . C . PASS END=46509538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46509539 . C . PASS END=46509540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 46509541 . G . PASS END=46509541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 46509542 . C . PASS END=46509542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 46509543 . C . PASS END=46509543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 46511590 . A . PASS END=46511623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1039:0,81,255:37,0 chr1 46511624 . T . PASS END=46511624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:32,0 chr1 46511625 . C . PASS END=46511632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1325:0,95,255:34,0 chr1 46511633 . T . PASS END=46511633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr1 46511634 . T . PASS END=46511760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:34:0,90,1272:0,92,255:40,0 chr1 46512223 . T . PASS END=46512297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,119,1659:0,119,255:40,0 chr1 46521467 . A . PASS END=46521479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,122,255:40,0 chr1 46521480 . C . PASS END=46521516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,125,255:40,0 chr1 46521517 . G A, 45.99 PASS DP=64;MQ=250.00;MQRankSum=6.666;ReadPosRankSum=5.219;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,25,0:0.397,0.000:63:17,9,0:21,16,0:45:81,0,50,812,1357,2170:255,0,255:34,0:4.5985e+01,1.3124e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,10,10,15:19,19,14,11 chr1 46521518 . C . PASS END=46521558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,158,255:40,0 chr1 46521559 . A T, 46.33 PASS DP=63;MQ=250.00;MQRankSum=6.666;ReadPosRankSum=4.910;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,25,0:0.397,0.000:63:16,9,0:22,16,0:45:81,0,50,894,1359,2254:255,0,255:37,0:4.6330e+01,1.2296e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,18,10,15:18,20,14,11 chr1 46521560 . T . PASS END=46521596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,177,255:40,0 chr1 46521597 . G . PASS END=46521643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:94:43:0,94,1530:0,94,255:40,0 chr1 46527601 . C . PASS END=46527743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:54:0,120,1800:0,142,255:40,0 chr1 46531726 . C . PASS END=46531851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1440:0,115,255:40,0 chr1 46532583 . C . PASS END=46532584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 46532585 . G . PASS END=46532585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46532586 . T . PASS END=46532586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,977:0,54,255:28,0 chr1 46532587 . T . PASS END=46532763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:83:31:0,83,1205:0,83,255:40,0 chr1 46543187 . C . PASS END=46543285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,117,1755:0,121,255:40,0 chr1 46546314 . C . PASS END=46546314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 46546315 . T . PASS END=46546315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 46546316 . T . PASS END=46546322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 46546323 . T . PASS END=46546323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 46546324 . C . PASS END=46546325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 46546326 . C . PASS END=46546422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:89:33:0,89,1102:0,89,255:40,0 chr1 46597519 . C . PASS END=46597539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:98:60:0,98,1597:0,98,255:40,0 chr1 46597540 . A . PASS END=46597628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:66:0,120,1800:0,168,255:40,0 chr1 46598371 . C . PASS END=46598378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,639:0,41,255:19,0 chr1 46598379 . G . PASS END=46598380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 46598381 . G . PASS END=46598381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 46598382 . C . PASS END=46598405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:23,0 chr1 46598406 . G . PASS END=46598406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 46598407 . A . PASS END=46598407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 46598408 . C . PASS END=46598412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:28,0 chr1 46598413 . G . PASS END=46598413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 46598414 . G . PASS END=46598414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 46598415 . C . PASS END=46598415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 46598416 . A . PASS END=46598417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 46641258 . C . PASS END=46641301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,111,1546:0,111,255:40,0 chr1 46641900 . C . PASS END=46641922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,552:0,51,255:19,0 chr1 46641923 . A . PASS END=46641937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,892:0,63,255:24,0 chr1 46641938 . T . PASS END=46641938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 46641939 . G . PASS END=46641945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,878:0,75,255:25,0 chr1 46641946 . G . PASS END=46641950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 46641951 . T . PASS END=46641954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,955:0,67,255:25,0 chr1 46641955 . C . PASS END=46641958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46641959 . G . PASS END=46641959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 46641960 . C . PASS END=46641962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1041:0,87,255:29,0 chr1 46641963 . T . PASS END=46641963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 46641964 . G . PASS END=46641966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46641967 . G . PASS END=46641974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,950:0,73,255:26,0 chr1 46641975 . T . PASS END=46641977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 46641978 . T . PASS END=46641978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 46641979 . G . PASS END=46641979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 46641980 . G . PASS END=46641980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 46641981 . C . PASS END=46641985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 46641986 . C . PASS END=46641986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 46641987 . T . PASS END=46641989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 46641990 . T . PASS END=46641990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 46641991 . G . PASS END=46642010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,930:0,87,255:30,0 chr1 46642011 . C . PASS END=46642011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 46642012 . C . PASS END=46642014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 46642015 . T . PASS END=46642015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 46642016 . T . PASS END=46642034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 46642035 . A . PASS END=46642038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46642039 . G . PASS END=46642064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1117:0,90,255:30,0 chr1 46642065 . G . PASS END=46642065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 46642066 . C . PASS END=46642066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:23,0 chr1 46642067 . C . PASS END=46642069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 46642070 . C . PASS END=46642084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:19:0,42,630:0,57,255:19,0 chr1 46642085 . C . PASS END=46642093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 46642094 . G . PASS END=46642106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:13,0 chr1 46642107 . G . PASS END=46642119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 46642120 . A . PASS END=46642120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 46642121 . C T, 0.02 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.751;ReadPosRankSum=-0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:2,0,0:6,1,0:23:12,0,50,36,286,322:12,0,255:5,0:2.1339e-02,2.3098e+01,7.6098e+01,5.8869e+01,3.4391e+02,3.4791e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,7,1,0:5,3,0,1 chr1 46642122 . G . PASS END=46642123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 46642124 . A . PASS END=46642124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 46642125 . C . PASS END=46642143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr1 46646780 . A . PASS END=46646836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:63:0,120,1800:0,152,255:40,0 chr1 46649863 . C . PASS END=46649869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,945:0,75,255:26,0 chr1 46649870 . G . PASS END=46650033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1095:0,84,255:40,0 chr1 46650034 . G . PASS END=46650034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 46650035 . G . PASS END=46650039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:27,0 chr1 46650040 . A . PASS END=46650041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 46650042 . G . PASS END=46650043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:28,0 chr1 46650044 . C . PASS END=46650044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:26,0 chr1 46650045 . T . PASS END=46650049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 46650050 . G . PASS END=46650051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 46650052 . A . PASS END=46650052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:26,0 chr1 46650053 . A . PASS END=46650060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 46650061 . C . PASS END=46650062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 46650063 . C . PASS END=46650063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 46650064 . G . PASS END=46650069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 46650266 . T . PASS END=46650283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,131,255:40,0 chr1 46650284 . C . PASS END=46650284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:73:54:0,73,1559:0,73,255:40,0 chr1 46650285 . T . PASS END=46650340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,127,255:40,0 chr1 46650457 . G . PASS END=46650555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:52:0,116,1800:0,116,255:40,0 chr1 46650632 . C . PASS END=46650787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,120,1800:0,124,255:40,0 chr1 46650897 . G . PASS END=46650980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:34:0,80,1132:0,80,255:40,0 chr1 46651158 . C . PASS END=46651205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:33:0,88,1296:0,88,255:40,0 chr1 46654391 . T . PASS END=46654401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,574:0,51,255:17,0 chr1 46654402 . T . PASS END=46654402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 46654403 . G . PASS END=46654409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 46654410 . T . PASS END=46654410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 46654411 . G . PASS END=46654416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 46654417 . A . PASS END=46654417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 46654418 . G . PASS END=46654438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:19,0 chr1 46654439 . G . PASS END=46654443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 46654444 . A . PASS END=46654446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr1 46654447 . G . PASS END=46654466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,799:0,66,255:26,0 chr1 46654467 . G . PASS END=46654487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1048:0,84,255:29,0 chr1 46654488 . C . PASS END=46654488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 46654489 . C . PASS END=46654589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1062:0,84,255:37,0 chr1 46654590 . A . PASS END=46654590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:26,0 chr1 46654591 . G . PASS END=46654596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:29,0 chr1 46654597 . G . PASS END=46654597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 46654598 . C . PASS END=46654606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 46654607 . A . PASS END=46654607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:28,0 chr1 46654608 . A . PASS END=46654609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 46654610 . G . PASS END=46654629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,945:0,69,255:24,0 chr1 46654630 . A . PASS END=46654630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:20,0 chr1 46654631 . T . PASS END=46654639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 46654640 . T . PASS END=46654652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,47,255:18,0 chr1 46654721 . C . PASS END=46654721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 46654735 . C . PASS END=46654735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 46654908 . C . PASS END=46654908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 46654914 . C . PASS END=46654926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 46654927 . G . PASS END=46654933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 46654934 . A . PASS END=46654934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 46654935 . G . PASS END=46654959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 46654960 . T . PASS END=46654960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 46654961 . C . PASS END=46655003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 46655004 . G . PASS END=46655004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:15,0 chr1 46655005 . G . PASS END=46655005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 46655006 . G . PASS END=46655013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 46655014 . G . PASS END=46655018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 46655019 . G . PASS END=46655021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46655022 . T . PASS END=46655022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 46655023 . C . PASS END=46655027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46655028 . C . PASS END=46655028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr1 46655029 . T . PASS END=46655030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,682:0,46,255:19,0 chr1 46655121 . G . PASS END=46655121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 46655129 . C . PASS END=46655142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,961:0,75,255:26,0 chr1 46655143 . C . PASS END=46655145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46655146 . G . PASS END=46655157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr1 46655158 . T C, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,14,0:0,12,0:75:163,78,0,1009,78,1009:255,78,0:0,0:1.2525e+02,7.5253e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,12:0,0,16,10 chr1 46655159 . C . PASS END=46655173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr1 46655174 . C . PASS END=46655195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1003:0,81,255:30,0 chr1 46655196 . C . PASS END=46655198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1163:0,90,255:30,0 chr1 46655199 . C . PASS END=46655200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 46655201 . A . PASS END=46655202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46655203 . G . PASS END=46655203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 46655204 . G . PASS END=46655221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr1 46655222 . G . PASS END=46655222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:27,0 chr1 46655223 . T . PASS END=46655225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 46655226 . C . PASS END=46655241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,881:0,67,255:25,0 chr1 46655245 . G . PASS END=46655245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 46655248 . G . PASS END=46655248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 46655524 . A . PASS END=46655524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46655526 . C . PASS END=46655526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46655527 . T . PASS END=46655527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:26,0 chr1 46655528 . T . PASS END=46655645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1024:0,80,255:36,0 chr1 46655646 . C . PASS END=46655647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 46655648 . G . PASS END=46655659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,67,255:26,0 chr1 46655660 . C . PASS END=46655661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:28:0,57,855:0,67,255:19,0 chr1 46655665 . C . PASS END=46655665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 46656143 . A . PASS END=46656143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 46656145 . C . PASS END=46656190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,100,1218:0,100,255:40,0 chr1 46656192 . G . PASS END=46656192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 46656390 . A . PASS END=46656390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 46656391 . C . PASS END=46656391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 46656392 . C . PASS END=46656431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1202:0,86,255:35,0 chr1 46656432 . A . PASS END=46656432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:34,0 chr1 46656433 . C . PASS END=46656456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1149:0,82,255:35,0 chr1 46656458 . T . PASS END=46656458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 46656462 . G . PASS END=46656462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 46657767 . C . PASS END=46657895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,99,1382:0,111,255:40,0 chr1 46657979 . C . PASS END=46658049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1202:0,93,255:34,0 chr1 46658050 . C . PASS END=46658064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:27:0,73,980:0,73,255:26,0 chr1 46658065 . A . PASS END=46658065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46658066 . C . PASS END=46658088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 46658089 . T . PASS END=46658096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 46658097 . G . PASS END=46658098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 46658099 . G . PASS END=46658103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46658104 . T . PASS END=46658108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 46658110 . T . PASS END=46658110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46658114 . G . PASS END=46658114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46658170 . C . PASS END=46658170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 46658181 . C . PASS END=46658181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 46658190 . C . PASS END=46658197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:31,0 chr1 46658198 . T . PASS END=46658198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 46658199 . C . PASS END=46658224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1149:0,82,255:34,0 chr1 46658225 . C . PASS END=46658225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1241:0,61,255:32,0 chr1 46658226 . A . PASS END=46658254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:34,0 chr1 46658255 . T . PASS END=46658263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 46658572 . C . PASS END=46658631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:61:0,120,1800:0,146,255:40,0 chr1 46658638 . G . PASS END=46658638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 46658843 . C . PASS END=46658844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr1 46658846 . C . PASS END=46658887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:44:0,110,1603:0,110,255:40,0 chr1 46658893 . A . PASS END=46658893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 46658896 . G . PASS END=46658896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 46658968 . A . PASS END=46658968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 46658977 . C . PASS END=46659060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1302:0,89,255:40,0 chr1 46659236 . C . PASS END=46659236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1117:0,93,255:31,0 chr1 46659237 . T . PASS END=46659237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 46659238 . C . PASS END=46659244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1127:0,80,255:32,0 chr1 46659245 . G . PASS END=46659245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 46659246 . C . PASS END=46659250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 46659251 . A . PASS END=46659251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 46659252 . A . PASS END=46659263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:31,0 chr1 46659264 . A . PASS END=46659264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 46659265 . T . PASS END=46659266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 46659267 . A . PASS END=46659267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 46659268 . T . PASS END=46659270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46659271 . G . PASS END=46659271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:27,0 chr1 46659272 . A . PASS END=46659282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 46659283 . C . PASS END=46659305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,887:0,67,255:26,0 chr1 46659306 . A . PASS END=46659311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:24:0,54,810:0,58,255:18,0 chr1 46659527 . C . PASS END=46659599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,99,1512:0,99,255:40,0 chr1 46659601 . T . PASS END=46659601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 46659941 . C . PASS END=46659941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr1 46659944 . A . PASS END=46659946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:36,0 chr1 46659947 . G . PASS END=46659947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr1 46659948 . G . PASS END=46660064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:35:0,84,1305:0,84,255:40,0 chr1 46660065 . A . PASS END=46660065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:27,0 chr1 46660066 . C . PASS END=46660072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 46660073 . T . PASS END=46660073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 46660088 . C . PASS END=46660088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 46660221 . C . PASS END=46660221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 46660224 . C . PASS END=46660227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr1 46660228 . C . PASS END=46660257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:29,0 chr1 46660258 . G . PASS END=46660286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1094:0,80,255:33,0 chr1 46660287 . G . PASS END=46660287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr1 46660288 . C . PASS END=46660294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1203:0,99,255:33,0 chr1 46660295 . T C, 48.36 PASS DP=32;MQ=250.00;MQRankSum=4.664;ReadPosRankSum=2.862;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,13,0:0.419,0.000:31:9,4,0:9,9,0:47:83,0,50,457,607,1064:255,0,255:17,0:4.8361e+01,8.5166e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,4,9:11,7,7,6 chr1 46660296 . T . PASS END=46660302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:31,0 chr1 46660303 . G . PASS END=46660303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 46660304 . T . PASS END=46660311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 46660312 . C . PASS END=46660323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1035:0,71,255:27,0 chr1 46660325 . T . PASS END=46660325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:20,0 chr1 46660508 . G . PASS END=46660508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 46660510 . C . PASS END=46660510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 46660515 . C . PASS END=46660520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:28,0 chr1 46660521 . T . PASS END=46660521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr1 46660522 . T . PASS END=46660525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 46660526 . T . PASS END=46660526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 46660527 . C . PASS END=46660527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46660528 . C . PASS END=46660528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,962:0,48,255:27,0 chr1 46660529 . C . PASS END=46660530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 46660531 . C . PASS END=46660532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 46660533 . A . PASS END=46660533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 46660534 . A . PASS END=46660534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 46660535 . G . PASS END=46660535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46660536 . G . PASS END=46660537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 46660538 . C . PASS END=46660538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:30,0 chr1 46660539 . C . PASS END=46660539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 46660540 . A . PASS END=46660540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1080:0,65,255:31,0 chr1 46660541 . T . PASS END=46660541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr1 46660542 . G . PASS END=46660542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 46660543 . T . PASS END=46660546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1105:0,96,255:32,0 chr1 46660547 . C . PASS END=46660547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1070:0,41,255:30,0 chr1 46660548 . C . PASS END=46660548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 46660549 . T . PASS END=46660550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:34,0 chr1 46660551 . C . PASS END=46660551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:33,0 chr1 46660552 . A . PASS END=46660573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:34:0,82,1143:0,82,255:39,0 chr1 46660574 . G . PASS END=46660574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 46660575 . C . PASS END=46660597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:33:0,80,1227:0,80,255:37,0 chr1 46660598 . C . PASS END=46660598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr1 46660599 . T . PASS END=46660618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:32,0 chr1 46660619 . G . PASS END=46660633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 46661483 . C . PASS END=46661514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,817:0,62,255:26,0 chr1 46661515 . C . PASS END=46661516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46661517 . A . PASS END=46661517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 46661518 . C . PASS END=46661531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1133:0,87,255:30,0 chr1 46661532 . A . PASS END=46661532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:28,0 chr1 46661533 . G . PASS END=46661538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1169:0,80,255:29,0 chr1 46661539 . T . PASS END=46661540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1147:0,77,255:27,0 chr1 46661541 . G . PASS END=46661585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 46661586 . A . PASS END=46661587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 46661588 . C . PASS END=46661596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 46661603 . G . PASS END=46661603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 46661679 . C . PASS END=46661679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr1 46661684 . C . PASS END=46661684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46661685 . G . PASS END=46661686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46661687 . G . PASS END=46661688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 46661689 . C . PASS END=46661697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 46661698 . G . PASS END=46661710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:30,0 chr1 46661711 . G . PASS END=46661711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 46661712 . A . PASS END=46661729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1202:0,83,255:33,0 chr1 46661730 . C . PASS END=46661730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr1 46661731 . G . PASS END=46661749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:33,0 chr1 46661752 . A . PASS END=46661752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr1 46661758 . T . PASS END=46661758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 46661874 . T . PASS END=46661972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:53:0,120,1800:0,129,255:40,0 chr1 46662397 . A . PASS END=46662397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 46662400 . G . PASS END=46662400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 46662402 . C . PASS END=46662413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,978:0,67,255:26,0 chr1 46662414 . C . PASS END=46662417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 46662418 . T . PASS END=46662418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 46662419 . G . PASS END=46662453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1141:0,80,255:31,0 chr1 46662454 . T . PASS END=46662457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 46662458 . T . PASS END=46662464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 46662465 . C . PASS END=46662465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46662466 . C . PASS END=46662468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46662469 . C . PASS END=46662469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 46662470 . C . PASS END=46662472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,1 chr1 46662473 . G . PASS END=46662476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 46662477 . C . PASS END=46662477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 46662478 . A . PASS END=46662479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46662480 . T . PASS END=46662486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr1 46662487 . G . PASS END=46662487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1038:0,43,255:23,0 chr1 46662488 . C . PASS END=46662500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,74,255:24,0 chr1 46662501 . C . PASS END=46662501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 46662502 . C . PASS END=46662505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 46662506 . C . PASS END=46662506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 46662507 . G . PASS END=46662517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 46662518 . T . PASS END=46662522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 46662534 . A . PASS END=46662534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 46662642 . C . PASS END=46662756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1111:0,82,255:38,0 chr1 46662758 . T . PASS END=46662758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 46662762 . G . PASS END=46662762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:20,0 chr1 46662980 . C . PASS END=46662981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 46662982 . A . PASS END=46662982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 46662983 . G . PASS END=46662985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 46662986 . C . PASS END=46662997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 46662998 . T . PASS END=46662998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,885:0,64,255:26,0 chr1 46662999 . C . PASS END=46663000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 46663001 . A . PASS END=46663013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,939:0,67,255:27,0 chr1 46663014 . A . PASS END=46663018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46663019 . C . PASS END=46663019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 46663020 . T . PASS END=46663024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46663025 . C . PASS END=46663033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr1 46663361 . G . PASS END=46663361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 46663368 . C . PASS END=46663368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 46663371 . T . PASS END=46663372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 46663374 . C . PASS END=46663397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,876:0,61,255:26,0 chr1 46663398 . C . PASS END=46663401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 46663402 . T . PASS END=46663402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 46663403 . T . PASS END=46663409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:28,0 chr1 46663410 . T . PASS END=46663410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 46663411 . T . PASS END=46663416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 46663417 . T . PASS END=46663420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 46663421 . A . PASS END=46663424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46663425 . A . PASS END=46663433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46663434 . G . PASS END=46663445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 46663446 . C . PASS END=46663469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,914:0,68,255:27,0 chr1 46663470 . G . PASS END=46663470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 46663471 . G . PASS END=46663475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 46663476 . G . PASS END=46663493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 46663504 . C . PASS END=46663504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 46664021 . C . PASS END=46664021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:20,0 chr1 46664098 . T . PASS END=46664098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 46664101 . G . PASS END=46664101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 46669099 . A . PASS END=46669100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 46669101 . G . PASS END=46669115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr1 46669116 . G . PASS END=46669123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 46669124 . C . PASS END=46669124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 46669125 . G . PASS END=46669129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 46669130 . A . PASS END=46669130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 46669131 . C . PASS END=46669145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr1 46669146 . G . PASS END=46669161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 46669162 . A . PASS END=46669162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 46669163 . A . PASS END=46669190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,821:0,66,255:25,0 chr1 46669191 . G . PASS END=46669191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 46669192 . C . PASS END=46669203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,976:0,78,255:26,0 chr1 46669204 . G . PASS END=46669204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46669205 . A . PASS END=46669208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 46669209 . G . PASS END=46669212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46669213 . A . PASS END=46669214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46669215 . C . PASS END=46669217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46669218 . T . PASS END=46669224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 46669225 . C . PASS END=46669234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 46669235 . C . PASS END=46669239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 46669240 . G . PASS END=46669241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,64,255:19,0 chr1 46669242 . G . PASS END=46669276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:23,0 chr1 46669277 . T . PASS END=46669296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 46685371 . G . PASS END=46685377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 46685378 . T . PASS END=46685378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 46685379 . G . PASS END=46685425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1117:0,80,255:37,0 chr1 46685426 . A . PASS END=46685426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:35,0 chr1 46685427 . G . PASS END=46685490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1169:0,93,255:38,0 chr1 46685491 . C . PASS END=46685547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 46685548 . A . PASS END=46685551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 46685552 . G . PASS END=46685552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 46685553 . G . PASS END=46685558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46685559 . C . PASS END=46685564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46685565 . A . PASS END=46685565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46685566 . G . PASS END=46685567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 46685568 . C . PASS END=46685579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 46685580 . C . PASS END=46685612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,947:0,75,255:26,0 chr1 46685613 . C . PASS END=46685615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 46685616 . G . PASS END=46685616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 46685617 . G . PASS END=46685848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1023:0,81,255:40,0 chr1 46685849 . A . PASS END=46685849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr1 46685850 . C . PASS END=46685862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 46685863 . C . PASS END=46685872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:24,0 chr1 46685873 . A . PASS END=46685892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,50,255:19,0 chr1 46714078 . A . PASS END=46714080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:18,0 chr1 46714184 . A . PASS END=46714223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1233:0,93,255:32,0 chr1 46714224 . C . PASS END=46714252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 46714253 . T . PASS END=46714253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 46714254 . G . PASS END=46714265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 46714266 . T . PASS END=46714287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr1 46714288 . C . PASS END=46714293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 46714294 . A . PASS END=46714294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:9,0 chr1 46714295 . G . PASS END=46714295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 46715672 . A . PASS END=46715672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:25,0 chr1 46715673 . C . PASS END=46715674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 46715675 . C . PASS END=46715675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 46715676 . C . PASS END=46715678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46715679 . G . PASS END=46715679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:30,0 chr1 46715680 . G . PASS END=46715682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 46715683 . A . PASS END=46715683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 46715684 . C . PASS END=46715791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:31:0,87,1305:0,93,255:40,0 chr1 46723414 . G . PASS END=46723428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 46723429 . G . PASS END=46723484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,574:0,41,255:18,0 chr1 46723485 . T . PASS END=46723489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 46724358 . G . PASS END=46724418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,185,255:40,0 chr1 46725636 . G . PASS END=46725640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 46725641 . C . PASS END=46725650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,887:0,81,255:27,0 chr1 46725651 . G . PASS END=46725658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 46725659 . G . PASS END=46725660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46725661 . C . PASS END=46725661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46725662 . C . PASS END=46725752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:38,0 chr1 46725753 . A . PASS END=46725763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46725764 . C . PASS END=46725765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 46725766 . T . PASS END=46725766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 46725767 . G . PASS END=46725767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 46725768 . A . PASS END=46725771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:23,0 chr1 46726214 . G . PASS END=46726283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,153,255:40,0 chr1 46726399 . G . PASS END=46726410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 46726411 . C . PASS END=46726457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,737:0,57,255:19,0 chr1 46726458 . C . PASS END=46726485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,790:0,63,255:22,0 chr1 46726486 . A . PASS END=46726486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 46726487 . A . PASS END=46726490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46726491 . G . PASS END=46726491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 46726492 . C . PASS END=46726494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 46726495 . C . PASS END=46726495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 46726496 . A . PASS END=46726528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:22:0,62,901:0,62,255:26,0 chr1 46726529 . A . PASS END=46726530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46726531 . A . PASS END=46726531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46726532 . G . PASS END=46726548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 46726549 . G . PASS END=46726549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 46726550 . A . PASS END=46726573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1111:0,87,255:30,0 chr1 46726574 . C . PASS END=46726575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 46726576 . C . PASS END=46726595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 46726596 . C . PASS END=46726606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:25,0 chr1 46726607 . A . PASS END=46726607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:24,0 chr1 46726608 . G . PASS END=46726624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:25,0 chr1 46726625 . G . PASS END=46726634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 46726635 . C . PASS END=46726635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 46726636 . C . PASS END=46726636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46726637 . A . PASS END=46726668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,945:0,62,255:25,0 chr1 46726669 . G . PASS END=46726669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46726670 . A . PASS END=46726673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 46726674 . A . PASS END=46726674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr1 46726675 . G . PASS END=46726679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46726680 . A . PASS END=46726680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 46726681 . A . PASS END=46726700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 46726701 . A . PASS END=46726701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46726933 . A . PASS END=46727057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,99,1613:0,99,255:40,0 chr1 46733131 . G . PASS END=46733344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,92,255:40,0 chr1 46733345 . T . PASS END=46733349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46736331 . G . PASS END=46736369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1156:0,85,255:36,0 chr1 46736370 . T . PASS END=46736370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr1 46736371 . T . PASS END=46736403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1194:0,86,255:37,0 chr1 46736404 . A . PASS END=46736404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:33,0 chr1 46736405 . G . PASS END=46736405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 46736406 . A . PASS END=46736406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:31,0 chr1 46736407 . C . PASS END=46736432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:30,0 chr1 46736433 . G . PASS END=46736435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46736436 . A . PASS END=46736439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 46736440 . C . PASS END=46736446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 46736447 . A . PASS END=46736447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:20,0 chr1 46736448 . T . PASS END=46736452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:22,0 chr1 46736453 . A . PASS END=46736457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:19,0 chr1 46738138 . A . PASS END=46738212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,131,255:40,0 chr1 46738344 . G . PASS END=46738474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,115,1453:0,115,255:40,0 chr1 46739027 . A . PASS END=46739137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:37:0,93,1341:0,95,255:40,0 chr1 46739296 . G . PASS END=46739400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1079:0,85,255:40,0 chr1 46739401 . A . PASS END=46739419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,78,255:26,0 chr1 46739810 . G . PASS END=46739810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 46739811 . T . PASS END=46739811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 46739812 . A . PASS END=46739813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:25,0 chr1 46739814 . T . PASS END=46739888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1056:0,82,255:34,0 chr1 46740210 . A . PASS END=46740270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,764:0,64,255:25,0 chr1 46740271 . G . PASS END=46740278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46740279 . C . PASS END=46740279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 46740280 . G . PASS END=46740281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46740282 . C . PASS END=46740282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 46740283 . T . PASS END=46740285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46740286 . T . PASS END=46740287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 46740288 . A . PASS END=46740292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46740293 . T . PASS END=46740293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:27,0 chr1 46740294 . G . PASS END=46740296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46740297 . C . PASS END=46740299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 46740300 . G . PASS END=46740301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr1 46740302 . C . PASS END=46740348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1141:0,82,255:32,0 chr1 46740349 . A . PASS END=46740349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 46740350 . T . PASS END=46740362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 46740363 . A . PASS END=46740365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 46740366 . T . PASS END=46740371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 46740372 . A . PASS END=46740372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46740373 . T . PASS END=46740374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 46740375 . T . PASS END=46740375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 46740376 . A . PASS END=46740377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46740378 . C . PASS END=46740378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 46740379 . G . PASS END=46740384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:29,0 chr1 46740385 . T . PASS END=46740389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,71,255:23,0 chr1 46743488 . G . PASS END=46743490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr1 46743491 . A . PASS END=46743491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:23,0 chr1 46743492 . G . PASS END=46743495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:24,0 chr1 46743496 . C . PASS END=46743496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46743497 . C . PASS END=46743497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:27,0 chr1 46743498 . A . PASS END=46743652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:30:0,86,1140:0,86,255:40,0 chr1 46743744 . G . PASS END=46743745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,775:0,50,255:20,0 chr1 46743746 . T . PASS END=46743750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr1 46743751 . T . PASS END=46743751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 46743752 . G . PASS END=46743771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,65,255:26,0 chr1 46743772 . C . PASS END=46743776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 46743777 . G . PASS END=46743778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,935:0,70,255:27,0 chr1 46743779 . T . PASS END=46743784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 46743785 . C . PASS END=46743785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 46743786 . A . PASS END=46743805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 46743806 . G . PASS END=46743808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46743809 . C . PASS END=46743817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 46743818 . T . PASS END=46743818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 46743819 . G . PASS END=46743819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 46743820 . G . PASS END=46743830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 46743831 . C . PASS END=46743945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,89,255:36,0 chr1 46743946 . C . PASS END=46743949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr1 46743950 . G . PASS END=46743950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:21,0 chr1 46743951 . C . PASS END=46743954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:23,0 chr1 46744377 . T . PASS END=46744522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:32:0,90,1350:0,96,255:40,1 chr1 46744523 . A . PASS END=46744524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 46744525 . G . PASS END=46744531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,108,255:28,0 chr1 46744532 . C . PASS END=46744554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:27:0,67,978:0,67,255:26,0 chr1 46744555 . A . PASS END=46744555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46744556 . T . PASS END=46744557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 46744558 . T . PASS END=46744559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46744560 . C . PASS END=46744604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:26,0 chr1 46744605 . T . PASS END=46744607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 46744608 . C . PASS END=46744608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:16,0 chr1 46744609 . C . PASS END=46744668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,630:0,40,255:19,0 chr1 46744669 . G . PASS END=46744671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,38,255:13,0 chr1 46744672 . G . PASS END=46744687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:15,0 chr1 46744688 . G . PASS END=46744737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 46744738 . T . PASS END=46744750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr1 46744751 . T . PASS END=46744751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 46744752 . T . PASS END=46744755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 46744756 . A . PASS END=46744756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 46744854 . C . PASS END=46744863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:30,0 chr1 46744864 . G . PASS END=46744864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 46744865 . C . PASS END=46744865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:29,0 chr1 46744866 . T . PASS END=46744869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1186:0,93,255:31,0 chr1 46744870 . A . PASS END=46744870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:29,0 chr1 46744871 . G . PASS END=46744882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 46744883 . T . PASS END=46744883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:25,0 chr1 46744884 . G . PASS END=46744895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 46744896 . A . PASS END=46744898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46744899 . A . PASS END=46744901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46744902 . T . PASS END=46744902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:26,0 chr1 46744903 . C . PASS END=46744915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr1 46744916 . C . PASS END=46744929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 46745114 . T . PASS END=46745117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 46745118 . A . PASS END=46745118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46745119 . G . PASS END=46745120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46745121 . C . PASS END=46745122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 46745123 . T . PASS END=46745123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 46745124 . A . PASS END=46745125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1092:0,77,255:27,0 chr1 46745126 . C . PASS END=46745129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 46745130 . T . PASS END=46745135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:26,0 chr1 46745136 . C . PASS END=46745136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 46745137 . T . PASS END=46745137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:26,0 chr1 46745138 . C . PASS END=46745141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 46745142 . C . PASS END=46745143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 46745144 . C . PASS END=46745148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:29,0 chr1 46745149 . G . PASS END=46745149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 46745150 . G . PASS END=46745286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1208:0,83,255:40,0 chr1 46745864 . C . PASS END=46745962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,99,1485:0,107,255:40,0 chr1 46746068 . C . PASS END=46746193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,90,255:40,0 chr1 46746194 . C . PASS END=46746198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 46746199 . G . PASS END=46746204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 46746205 . C . PASS END=46746232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr1 46746797 . C . PASS END=46746813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 46746814 . C . PASS END=46746850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:13,0 chr1 46746851 . C . PASS END=46746867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 46746868 . T . PASS END=46746868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 46746869 . G . PASS END=46746922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:19,0 chr1 46746923 . C . PASS END=46746950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 46746951 . C . PASS END=46746995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr1 46746996 . T . PASS END=46747000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 46747001 . C . PASS END=46747001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46747002 . C . PASS END=46747020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 46747021 . A . PASS END=46747021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 46747022 . G . PASS END=46747040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:10,0 chr1 46747041 . G . PASS END=46747041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 46747042 . A . PASS END=46747050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46747051 . C . PASS END=46747052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 46747053 . C . PASS END=46747057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 46750897 . C . PASS END=46750919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,631:0,51,255:19,0 chr1 46750920 . C . PASS END=46750922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 46750923 . T . PASS END=46750928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46750929 . C . PASS END=46750946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:22,0 chr1 46750947 . T . PASS END=46750947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:21,0 chr1 46750948 . T . PASS END=46750948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 46750949 . G . PASS END=46750949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 46750950 . C . PASS END=46750967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,837:0,62,255:25,0 chr1 46750968 . A . PASS END=46750968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,884:0,47,255:24,0 chr1 46750969 . A . PASS END=46751009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,917:0,69,255:25,0 chr1 46751010 . T . PASS END=46751010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 46751011 . C . PASS END=46751025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr1 46751026 . G . PASS END=46751026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:23,0 chr1 46751027 . T . PASS END=46751045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,908:0,61,255:25,0 chr1 46751046 . G . PASS END=46751053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46751054 . C . PASS END=46751055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,947:0,64,255:26,0 chr1 46751056 . C . PASS END=46751056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46751057 . T . PASS END=46751060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46751061 . G . PASS END=46751065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 46751066 . A . PASS END=46751066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 46751067 . C . PASS END=46751069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46751070 . A . PASS END=46751073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,939:0,65,255:26,0 chr1 46751074 . G . PASS END=46751078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 46751079 . G . PASS END=46751079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 46751080 . C . PASS END=46751083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 46751084 . T . PASS END=46751085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:27,0 chr1 46751086 . G . PASS END=46751158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1105:0,82,255:33,0 chr1 46751159 . T . PASS END=46751159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 46751160 . G . PASS END=46751273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1150:0,80,255:39,0 chr1 46751274 . T . PASS END=46751274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:30,0 chr1 46751275 . A . PASS END=46751304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1170:0,83,255:30,0 chr1 46751305 . T . PASS END=46751305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 46751306 . G . PASS END=46751310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 46751311 . A . PASS END=46751317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 46751318 . T . PASS END=46751329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 46751330 . G . PASS END=46751330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 46751331 . C . PASS END=46751331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 46751332 . A . PASS END=46751360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,878:0,61,255:26,0 chr1 46751361 . G . PASS END=46751362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1041:0,84,255:31,0 chr1 46751363 . T . PASS END=46751363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 46751364 . T . PASS END=46751366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 46751367 . G . PASS END=46751368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 46751369 . G . PASS END=46751379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1239:0,86,255:29,0 chr1 46751380 . T . PASS END=46751380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 46751381 . G . PASS END=46751381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46751382 . G . PASS END=46751382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 46751383 . G . PASS END=46751385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 46751386 . T . PASS END=46751386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:25,0 chr1 46751387 . G . PASS END=46751394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,86,255:29,0 chr1 46751395 . T . PASS END=46751395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr1 46751396 . G . PASS END=46751399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 46751400 . C . PASS END=46751400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 46751401 . C . PASS END=46751403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46751404 . T . PASS END=46751404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,779:0,37,255:24,0 chr1 46751405 . T . PASS END=46751405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46751406 . T . PASS END=46751406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:26,0 chr1 46751407 . G . PASS END=46751410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46751411 . G . PASS END=46751411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46751412 . A . PASS END=46751415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 46751416 . T . PASS END=46751416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46751417 . G . PASS END=46751426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 46751427 . A . PASS END=46751427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 46751428 . G . PASS END=46751507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1123:0,80,255:34,0 chr1 46751508 . C . PASS END=46751509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 46751510 . C . PASS END=46751536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1123:0,80,255:34,0 chr1 46751537 . A . PASS END=46751537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1158:0,66,255:31,0 chr1 46751538 . G . PASS END=46751574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1065:0,82,255:33,0 chr1 46751575 . A . PASS END=46751576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr1 46751577 . G . PASS END=46751577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 46751578 . T . PASS END=46751651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,892:0,61,255:26,0 chr1 46751652 . C . PASS END=46751671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,50,255:19,0 chr1 46751672 . G . PASS END=46751674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 46751675 . C . PASS END=46751694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,673:0,41,255:18,0 chr1 46751695 . A . PASS END=46751695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 46751696 . T . PASS END=46751703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 46751704 . T . PASS END=46751704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 46751705 . G . PASS END=46751747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:17,0 chr1 46751748 . G . PASS END=46751748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 46751749 . G . PASS END=46751758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 46751759 . C . PASS END=46751759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 46751760 . C . PASS END=46751783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:17,0 chr1 46751784 . T . PASS END=46751784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:16,0 chr1 46751785 . G . PASS END=46751821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,637:0,41,255:19,0 chr1 46751822 . G . PASS END=46751826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 46751827 . G . PASS END=46751859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr1 46751860 . G . PASS END=46751865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 46751866 . G . PASS END=46751867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46751868 . G . PASS END=46751918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 46751919 . G . PASS END=46751919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:21,0 chr1 46751920 . C . PASS END=46751920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 46751921 . A . PASS END=46751929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 46751930 . A . PASS END=46751931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:23:0,55,800:0,55,255:20,0 chr1 46751932 . C . PASS END=46751937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 46751938 . A . PASS END=46751947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 46751948 . G . PASS END=46751948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 46751949 . A . PASS END=46751952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 46751953 . G . PASS END=46751956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 46751957 . A . PASS END=46751957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46751958 . G . PASS END=46751959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46751960 . G . PASS END=46751961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 46751962 . C . PASS END=46751984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 46751985 . C . PASS END=46751991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 46751992 . C . PASS END=46751993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46751994 . G . PASS END=46751995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46751996 . T . PASS END=46751996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46751997 . C . PASS END=46752000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 46752001 . T . PASS END=46752014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 46752015 . T . PASS END=46752127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1064:0,85,255:40,0 chr1 46752128 . G . PASS END=46752128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 46752129 . A . PASS END=46752134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46752135 . A . PASS END=46752135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,926:0,48,255:26,0 chr1 46752136 . G . PASS END=46752136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 46752137 . G . PASS END=46752154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,832:0,62,255:26,0 chr1 46752155 . C . PASS END=46752155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 46752156 . G . PASS END=46752171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 46763235 . T . PASS END=46763254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:23:0,68,793:0,68,255:27,0 chr1 46763255 . T . PASS END=46763280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:29,0 chr1 46763281 . C . PASS END=46763281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:28,0 chr1 46763282 . G . PASS END=46763284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46763285 . A . PASS END=46763285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 46763286 . G . PASS END=46763286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 46763287 . A . PASS END=46763287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 46763288 . T . PASS END=46763292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 46763293 . T . PASS END=46763305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:26:0,64,902:0,64,255:26,0 chr1 46763956 . C . PASS END=46764042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,121,255:40,1 chr1 46768435 . C . PASS END=46768435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 46768436 . G . PASS END=46768436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 46768437 . G . PASS END=46768438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 46768439 . T . PASS END=46768445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 46768446 . C . PASS END=46768448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 46768449 . A . PASS END=46768449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 46768450 . G . PASS END=46768451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 46768452 . C . PASS END=46768452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 46768453 . T . PASS END=46768454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,468:0,45,255:18,0 chr1 46768455 . T . PASS END=46768455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 46768456 . C . PASS END=46768463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 46768464 . G . PASS END=46768466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 46768467 . C . PASS END=46768473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46768474 . G . PASS END=46768474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 46768475 . T . PASS END=46768495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 46768496 . G . PASS END=46768500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 46768501 . A . PASS END=46768501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 46768502 . A . PASS END=46768516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 46768517 . C . PASS END=46768522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 46768523 . C . PASS END=46768523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 46768524 . C . PASS END=46768558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 46768559 . T . PASS END=46768624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,389:0,36,255:13,0 chr1 46768625 . A . PASS END=46768626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46768627 . T . PASS END=46768633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 46768634 . A . PASS END=46768645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,29,255:10,0 chr1 46768646 . C . PASS END=46768657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 46768796 . C . PASS END=46768810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr1 46768811 . C . LowGQ END=46768811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 46768812 . C . PASS END=46768812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 46768813 . A . PASS END=46768813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 46768814 . G . PASS END=46768814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 46768815 . A . PASS END=46768815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 46768816 . A . PASS END=46768817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 46768818 . C . PASS END=46768819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 46768820 . C . PASS END=46768825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 46768826 . G . PASS END=46768826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 46768827 . G . PASS END=46768831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46768832 . T . PASS END=46768832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 46768833 . C . PASS END=46768834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46768835 . C . PASS END=46768835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 46768836 . C . PASS END=46768851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 46768852 . T . PASS END=46768852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 46768853 . C . PASS END=46768856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,529:0,48,255:16,0 chr1 46768857 . C . PASS END=46768857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 46768858 . A . PASS END=46768861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 46768862 . C . PASS END=46768862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:14,0 chr1 46768863 . G . PASS END=46768872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr1 46768873 . T . PASS END=46768873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 46768874 . T . PASS END=46768889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:18,0 chr1 46768890 . G . PASS END=46768890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 46768891 . C . PASS END=46768914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,629:0,53,255:19,0 chr1 46768915 . G . PASS END=46768917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 46768918 . G . PASS END=46768923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 46768924 . T . PASS END=46768924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 46768925 . C . PASS END=46768959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,630:0,41,255:19,0 chr1 46768960 . C . PASS END=46768960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 46768961 . A . PASS END=46768962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 46768963 . C . PASS END=46768973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 46768974 . C . PASS END=46768975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 46768976 . A . PASS END=46768994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 46769439 . A . PASS END=46769492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:37:0,91,1488:0,91,255:40,0 chr1 46774773 . G . PASS END=46774815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:71:0,120,1800:0,169,255:40,0 chr1 46775569 . A . PASS END=46775716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:54:0,116,1800:0,116,255:40,0 chr1 46775827 . G . PASS END=46775988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,114,1710:0,124,255:40,0 chr1 46782224 . G . PASS END=46782256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,167,255:40,0 chr1 46806499 . A . PASS END=46806499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,616:0,13,255:18,0 chr1 46806500 . T . PASS END=46806507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 46806508 . C . PASS END=46806508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 46806509 . T . PASS END=46806512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 46806513 . A . PASS END=46806513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:19,0 chr1 46806514 . C . PASS END=46806516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 46806517 . A . PASS END=46806558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 46806559 . G . PASS END=46806560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 46806561 . C . PASS END=46806563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 46806564 . G . PASS END=46806564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 46806565 . C . PASS END=46806569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 46806570 . A . PASS END=46806570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,468:0,34,255:16,0 chr1 46806571 . C . PASS END=46806578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,560:0,51,255:17,0 chr1 46806579 . T . PASS END=46806579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 46806580 . A . PASS END=46806581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 46806582 . G . PASS END=46806582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 46806583 . A . PASS END=46806585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 46806586 . A . PASS END=46806586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 46806587 . A . PASS END=46806588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 46806589 . T . PASS END=46806591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 46806995 . C . LowGQ END=46807008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,2:3:0:3:0,0,0:0,0,30:3,0 chr1 46807009 . C . PASS END=46807018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 46807019 . A . PASS END=46807019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 46807020 . A . PASS END=46807024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,209:0,18,209:6,0 chr1 46807025 . A . PASS END=46807029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 46807030 . G . PASS END=46807030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 46807031 . A . PASS END=46807034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 46807035 . T . PASS END=46807035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 46807036 . G . PASS END=46807036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 46807037 . C . PASS END=46807042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 46807043 . C . PASS END=46807043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 46807044 . T . LowGQ END=46807044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 46807045 . C . PASS END=46807058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 46807059 . G . PASS END=46807059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 46807060 . C . PASS END=46807072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 46807073 . G . PASS END=46807081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:16,0 chr1 46807082 . C . PASS END=46807082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 46807083 . C . PASS END=46807085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 46807086 . C . PASS END=46807086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 46807087 . C . PASS END=46807113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr1 46807114 . G . PASS END=46807114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 46807115 . G . PASS END=46807146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,598:0,48,255:18,0 chr1 46807147 . G . PASS END=46807150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 46807151 . G . PASS END=46807161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr1 46807162 . G . PASS END=46807169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 46807516 . A . PASS END=46807518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:24,0 chr1 46807519 . C . PASS END=46807519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 46807520 . G . PASS END=46807530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,898:0,72,255:25,0 chr1 46807531 . C . PASS END=46807768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1019:0,84,255:40,0 chr1 46807769 . G . PASS END=46807769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:31,0 chr1 46807770 . G . PASS END=46807774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:33,0 chr1 46807775 . T . PASS END=46807775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:28,0 chr1 46807776 . G . PASS END=46807787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1127:0,82,255:30,0 chr1 46807788 . T . PASS END=46807788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 46807789 . A . PASS END=46807789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 46807790 . T . PASS END=46807790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 46807791 . G . PASS END=46807804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1172:0,83,255:35,0 chr1 46807805 . T . PASS END=46807805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 46807806 . T . PASS END=46807806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 46807807 . T . PASS END=46807807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:32,0 chr1 46807808 . C . PASS END=46807808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 46807809 . T . PASS END=46807809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:33,0 chr1 46807810 . C . PASS END=46807911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1143:0,85,255:39,0 chr1 46807912 . A . PASS END=46807912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:34,0 chr1 46807913 . C . PASS END=46807931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1288:0,81,255:36,0 chr1 46807932 . C . PASS END=46807932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1194:0,53,255:29,0 chr1 46807933 . A . PASS END=46808122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:36:0,84,1260:0,91,255:40,0 chr1 46808123 . A . PASS END=46808123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr1 46808124 . T . PASS END=46808181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1260:0,89,255:40,0 chr1 46808182 . C . PASS END=46808182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 46808183 . C . PASS END=46808188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 46808189 . A . PASS END=46808255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,892:0,66,255:26,0 chr1 46808256 . C . PASS END=46808275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:17:0,48,720:0,49,255:19,0 chr1 46808276 . C . PASS END=46808276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 46808277 . C . PASS END=46808287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:17,0 chr1 46808288 . A . PASS END=46808288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,466:0,18,255:12,0 chr1 46808289 . A . PASS END=46808293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 46808294 . C . PASS END=46808294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 46808295 . T . PASS END=46808296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 46808297 . G . PASS END=46808298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 46808299 . C . PASS END=46808304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 46808305 . G . PASS END=46808312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 46808313 . T . PASS END=46808313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 46808314 . T . PASS END=46808315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 46808316 . T . PASS END=46808316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 46808317 . G . PASS END=46808318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 46808319 . C . PASS END=46808319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:10,0 chr1 46808320 . C . PASS END=46808321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:12,0 chr1 46808322 . T . PASS END=46808322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:11,0 chr1 46808323 . T . PASS END=46808333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 46808334 . A . PASS END=46808334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 46808335 . C . PASS END=46808338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr1 46808339 . T . PASS END=46808339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 46808340 . G . PASS END=46808344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr1 46808345 . A . PASS END=46808350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,423:0,42,255:14,0 chr1 46808351 . T . PASS END=46808352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 46808353 . A . PASS END=46808353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 46808354 . T . PASS END=46808354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 46808355 . A . PASS END=46808356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr1 46808357 . C . PASS END=46808358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 46808359 . C . PASS END=46808359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 46808360 . C . PASS END=46808361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 46808362 . C . PASS END=46808366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 46808367 . G . PASS END=46808367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,380:0,9,255:12,0 chr1 46808368 . T . PASS END=46808370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr1 46808371 . C . PASS END=46808371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 46808372 . T . PASS END=46808373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 46808374 . C . PASS END=46808374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 46808375 . C . PASS END=46808377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 46808378 . G . LowGQ END=46808378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,402:13,0,255:12,0 chr1 46808379 . C . PASS END=46808383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 46808384 . G . PASS END=46808384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:10,0 chr1 46808385 . C . PASS END=46808385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 46808386 . T . PASS END=46808388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:10,0 chr1 46808389 . A . PASS END=46808390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 46808391 . T . PASS END=46808391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:9,0 chr1 46808392 . G . PASS END=46808393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 46808394 . A . PASS END=46808405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808406 . C . PASS END=46808406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 46808407 . A . PASS END=46808423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 46808424 . A . PASS END=46808424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 46808425 . C . PASS END=46808437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 46808438 . A . PASS END=46808438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 46808439 . G . PASS END=46808452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 46808453 . G . PASS END=46808456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 46808457 . G . PASS END=46808464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 46808465 . C . LowGQ END=46808465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr1 46808466 . T . PASS END=46808475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,286:0,24,255:8,0 chr1 46808476 . T . PASS END=46808476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 46808477 . G . PASS END=46808481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 46808482 . T . PASS END=46808504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,180:0,18,180:6,0 chr1 46808505 . C . PASS END=46808519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 46808520 . G . PASS END=46808553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:13,0 chr1 46808554 . C . PASS END=46808592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 46808593 . T . PASS END=46808603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,527:0,31,255:13,0 chr1 46808604 . T . PASS END=46808604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr1 46808605 . C . PASS END=46808624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,399:0,39,255:13,0 chr1 46808625 . A . PASS END=46808625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 46808626 . G . PASS END=46808632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 46808633 . C . PASS END=46808633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 46808634 . C . PASS END=46808643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,376:0,36,255:12,0 chr1 46808644 . A . PASS END=46808644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 46808645 . C . PASS END=46808659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,495:0,31,255:13,0 chr1 46808660 . T . LowGQ END=46808660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,316:11,0,255:9,0 chr1 46808661 . C . PASS END=46808669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 46808670 . T . PASS END=46808670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,324:0,3,255:10,0 chr1 46808671 . C . PASS END=46808682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:12,0 chr1 46808683 . A . PASS END=46808683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 46808684 . T . PASS END=46808686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 46808687 . C . PASS END=46808687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,341:0,19,255:9,0 chr1 46808688 . C . PASS END=46808688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 46808689 . A . PASS END=46808698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,394:0,20,255:9,0 chr1 46808699 . C . PASS END=46808700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 46808701 . C . LowGQ END=46808702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:0,0,255:10,0 chr1 46808703 . C . PASS END=46808703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 46808704 . T . PASS END=46808711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 46808712 . T . PASS END=46808716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808717 . A . PASS END=46808717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 46808718 . T . PASS END=46808718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808719 . C . PASS END=46808719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 46808720 . C . PASS END=46808727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,325:0,27,255:9,0 chr1 46808728 . G . LowGQ END=46808728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:8,0 chr1 46808729 . C . PASS END=46808730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808731 . A . LowGQ END=46808731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:8,0 chr1 46808732 . A . PASS END=46808761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 46808762 . C . PASS END=46808767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 46808768 . T . PASS END=46808779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:8,0 chr1 46808780 . G . PASS END=46808780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,188:0,7,188:7,0 chr1 46808781 . C . PASS END=46808783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 46808784 . T . PASS END=46808784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 46808785 . A . PASS END=46808793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,235:9,0 chr1 46808794 . T . PASS END=46808794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 46808795 . G . PASS END=46808796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 46808797 . T . PASS END=46808800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808801 . T . PASS END=46808801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 46808802 . G . PASS END=46808811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 46808812 . A . PASS END=46808812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr1 46808813 . C . PASS END=46808813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 46808814 . C . PASS END=46808814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:8,0 chr1 46808815 . C . PASS END=46808815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 46808816 . C . LowGQ END=46808816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 46808817 . C . PASS END=46808817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 46808818 . C . PASS END=46808818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 46808819 . A . LowGQ END=46808820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,4:9:0:9:0,0,50:39,0,128:5,0 chr1 46808821 . C . PASS END=46808823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 46808824 . T . LowGQ END=46808824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,186:6,0,192:7,0 chr1 46808825 . G . PASS END=46808826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 46808827 . C . PASS END=46808828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 46808829 . A . LowGQ END=46808829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,156:28,0,184:7,0 chr1 46808830 . C . PASS END=46808830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 46808831 . T . LowGQ END=46808831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,4:9:0:9:0,0,128:39,0,167:5,0 chr1 46808832 . G . PASS END=46808832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 46808833 . T . LowGQ END=46808833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:17,0,255:8,0 chr1 46808834 . C . PASS END=46808834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 46808835 . T . LowGQ END=46808835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,241:17,0,255:8,0 chr1 46808836 . G . PASS END=46808836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr1 46808837 . G . PASS END=46808837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808838 . C . LowGQ END=46808838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:6,0 chr1 46808839 . T . PASS END=46808840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808841 . C . PASS END=46808841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 46808842 . C . PASS END=46808842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808843 . T . PASS END=46808843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 46808844 . C . LowGQ END=46808844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,185:48,0,233:6,0 chr1 46808845 . A . PASS END=46808845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808846 . A . PASS END=46808846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 46808847 . T . LowGQ END=46808848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,122:17,0,195:7,0 chr1 46808849 . A . PASS END=46808849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 46808850 . T . LowGQ END=46808850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,4:10:0:10:0,0,122:36,0,159:6,0 chr1 46808851 . T . PASS END=46808851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 46808852 . C . LowGQ END=46808852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,241:17,0,255:8,0 chr1 46808853 . G . PASS END=46808853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 46808854 . A . LowGQ END=46808855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,210:3,0,214:8,0 chr1 46808856 . A . PASS END=46808856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46808857 . G . LowGQ END=46808859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,5:11:0:10:0,0,136:9,0,200:8,0 chr1 46808860 . C . PASS END=46808861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 46808862 . C . PASS END=46808862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 46808863 . C . PASS END=46808864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 46808865 . T . PASS END=46808865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,310:0,3,255:8,0 chr1 46808866 . C . PASS END=46808868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 46808869 . A . PASS END=46808869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 46808870 . T . PASS END=46808870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr1 46808871 . T . PASS END=46808871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 46808872 . G . PASS END=46808872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 46808873 . T . PASS END=46808873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46808874 . G . PASS END=46808874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 46808875 . C . PASS END=46808875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 46808876 . C . PASS END=46808878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 46808879 . T . LowGQ END=46808879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,400:5,0,255:12,0 chr1 46808880 . G . PASS END=46808881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 46808882 . G . PASS END=46808882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 46808883 . T . PASS END=46808883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 46808884 . G . PASS END=46808884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 46808885 . A . LowGQ END=46808885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,496:32,0,255:14,0 chr1 46808886 . C . PASS END=46808887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:41:19:0,41,659:0,41,255:20,0 chr1 46808888 . C . PASS END=46808888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 46808889 . C . PASS END=46808889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 46808890 . T . PASS END=46808890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,761:0,25,255:21,0 chr1 46808891 . A . PASS END=46808893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 46808894 . G . PASS END=46808894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 46808895 . C . PASS END=46808896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 46808897 . C . PASS END=46808901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:25:0,42,798:0,42,255:26,0 chr1 46808902 . A . PASS END=46808902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 46808903 . G . PASS END=46808903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,839:0,34,255:25,0 chr1 46808904 . G . PASS END=46808904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:26,0 chr1 46808905 . G . PASS END=46808905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 46808906 . G . PASS END=46808906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 46808907 . C . PASS END=46808907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,853:0,26,255:25,0 chr1 46808908 . C . PASS END=46808909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 46808910 . A . PASS END=46808910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 46808911 . C . PASS END=46808914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 46808915 . A . PASS END=46808915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,856:0,29,255:26,0 chr1 46808916 . A . PASS END=46808916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:27,0 chr1 46808917 . C . PASS END=46808917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr1 46808918 . C . PASS END=46808918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 46808919 . T . PASS END=46808919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 46808920 . C . PASS END=46808920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1007:0,90,255:30,0 chr1 46808921 . G . PASS END=46808922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:29,0 chr1 46808923 . T . PASS END=46808923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 46808924 . G . PASS END=46808924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 46808925 . T . PASS END=46808937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1125:0,86,255:33,0 chr1 46808938 . C . PASS END=46808938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1119:0,71,255:33,0 chr1 46808939 . C . PASS END=46808943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:34:0,80,1260:0,80,255:36,0 chr1 46808944 . T . PASS END=46808944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:35,0 chr1 46808945 . G . PASS END=46808964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1205:0,88,255:36,0 chr1 46808965 . T . PASS END=46808965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1264:0,77,255:34,0 chr1 46808966 . T . PASS END=46808970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1235:0,91,255:35,0 chr1 46808971 . C . PASS END=46808971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:33,0 chr1 46808972 . C . PASS END=46808972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 46808973 . T . PASS END=46808973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,998:0,49,255:32,0 chr1 46808974 . T . PASS END=46808989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1172:0,85,255:34,0 chr1 46808990 . A . PASS END=46808990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:31,0 chr1 46808991 . T . PASS END=46809003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,976:0,86,255:35,0 chr1 46809004 . C . PASS END=46809006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1235:0,69,255:34,0 chr1 46809007 . A . PASS END=46809007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 46809008 . T . PASS END=46809008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1255:0,56,255:34,0 chr1 46809009 . T . PASS END=46809009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1290:0,94,255:35,0 chr1 46809010 . G . PASS END=46809014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1230:0,72,255:36,0 chr1 46809015 . C . PASS END=46809015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1219:0,56,255:35,0 chr1 46809016 . C . PASS END=46809017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr1 46809018 . A . PASS END=46809018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1219:0,56,255:33,0 chr1 46809019 . G . PASS END=46809022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1244:0,72,255:32,0 chr1 46809023 . G . PASS END=46809026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1405:0,81,255:35,0 chr1 46809027 . C . PASS END=46809029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,76,255:25,0 chr1 46809030 . C . PASS END=46809038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:80:45:0,80,1440:0,80,255:35,0 chr1 46809039 . T . PASS END=46809039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:34,0 chr1 46809040 . G . PASS END=46809041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1575:0,111,255:35,0 chr1 46809042 . C . PASS END=46809042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 46809043 . C . PASS END=46809045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 46809046 . T . PASS END=46809046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1318:0,59,255:34,0 chr1 46809047 . G . PASS END=46809048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 46809049 . G . PASS END=46809049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 46809050 . G . PASS END=46809065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1371:0,95,255:37,0 chr1 46809066 . T . PASS END=46809066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:32,0 chr1 46809067 . G . PASS END=46809308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:35:0,86,1258:0,86,255:40,0 chr1 46809309 . A . PASS END=46809309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1480:0,68,255:40,0 chr1 46809310 . A . PASS END=46809474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:96:45:0,96,1532:0,96,255:40,0 chr1 46810458 . T . PASS END=46810465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,897:0,78,255:26,0 chr1 46810466 . C . PASS END=46810483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1003:0,84,255:30,0 chr1 46810484 . G . PASS END=46810484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 46810485 . C . PASS END=46810489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 46810490 . A . PASS END=46810490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,930:0,76,255:29,0 chr1 46810491 . T . PASS END=46810492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46810493 . C . PASS END=46810529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1166:0,83,255:40,0 chr1 46810530 . A G, 191.00 PASS DP=48;MQ=248.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,27,0:0,21,0:141:229,144,0,1814,144,1814:255,144,0:0,0:1.9100e+02,1.4100e+02,0.0000e+00,4.5000e+02,1.7577e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,21:0,0,26,22 chr1 46810531 . C . PASS END=46810567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1338:0,103,255:40,0 chr1 46810568 . C . PASS END=46810785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:35:0,93,1395:0,94,255:40,0 chr1 46810786 . G . PASS END=46810808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,845:0,66,255:23,0 chr1 46810809 . C . PASS END=46810809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 46810810 . C . PASS END=46810816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46812593 . A . PASS END=46812607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 46812608 . T . PASS END=46812611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 46812612 . A . PASS END=46812612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 46812613 . T . PASS END=46812617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 46812618 . T . PASS END=46812636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 46812637 . C . PASS END=46812637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 46812638 . C . PASS END=46812670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 46812671 . G . PASS END=46812676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 46812677 . G . PASS END=46812677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 46812678 . G . PASS END=46812694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 46812695 . A . PASS END=46812706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 46812707 . T . PASS END=46812708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:20,2 chr1 46812709 . G . PASS END=46812715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 46812716 . G . PASS END=46812728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 46812729 . C . PASS END=46812739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:14:0,39,585:0,42,255:13,0 chr1 46812740 . C . PASS END=46812743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 46812744 . T . PASS END=46812745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 46812746 . C . PASS END=46812746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46812747 . C . PASS END=46812747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 46818540 . G . PASS END=46818553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1164:0,87,255:31,0 chr1 46818554 . A . PASS END=46818554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 46818555 . A . PASS END=46818555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr1 46818556 . T . PASS END=46818684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:31:0,92,1083:0,92,255:40,0 chr1 46818685 . G . PASS END=46818685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr1 46818686 . G . PASS END=46818700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1305:0,102,255:36,0 chr1 46826376 . G . PASS END=46826500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1258:0,84,255:40,0 chr1 46827242 . G . PASS END=46827244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:24,0 chr1 46827245 . T . PASS END=46827245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 46827246 . G . PASS END=46827250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,876:0,72,255:24,0 chr1 46827251 . C . PASS END=46827251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46827252 . C . PASS END=46827252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46827253 . T . PASS END=46827253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 46827254 . T . PASS END=46827260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 46827261 . A . PASS END=46827273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 46827274 . A . PASS END=46827297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:38,0 chr1 46827298 . T . PASS END=46827298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1318:0,76,255:38,0 chr1 46827299 . C . PASS END=46827485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:36:0,95,1363:0,95,255:40,0 chr1 46827486 . A . PASS END=46827486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1196:0,64,255:30,0 chr1 46827487 . T . PASS END=46827499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1158:0,85,255:33,0 chr1 46827500 . A . PASS END=46827500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1045:0,52,255:30,0 chr1 46827501 . A . PASS END=46827504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1249:0,99,255:33,0 chr1 46827505 . G . PASS END=46827510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr1 46827511 . T . PASS END=46827511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1123:0,44,255:22,0 chr1 46827512 . G . PASS END=46827518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:30:0,69,1035:0,74,255:24,0 chr1 46860021 . A . PASS END=46860022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 46860023 . G . PASS END=46860023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 46860024 . G . PASS END=46860024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 46860025 . T . LowGQ END=46860025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:7,0,247:7,0 chr1 46860026 . G . PASS END=46860044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 46860045 . G . PASS END=46860045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 46860046 . C . PASS END=46860052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 46860053 . T . PASS END=46860054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 46860055 . G . PASS END=46860066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 46860067 . T . PASS END=46860101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 46860102 . G . PASS END=46860128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 46860129 . G . PASS END=46860147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,415:0,33,255:13,0 chr1 46860148 . G . PASS END=46860148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 46860149 . G . PASS END=46860152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 46860153 . C . PASS END=46860153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 46860154 . G . PASS END=46860165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 46860166 . G . PASS END=46860167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 46860168 . G . PASS END=46860168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:14,0 chr1 46860169 . C . PASS END=46860179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,537:0,48,255:16,0 chr1 46860180 . A . PASS END=46860180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 46860181 . A . PASS END=46860195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 46860196 . C . PASS END=46860196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 46860197 . G . PASS END=46860197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 46860198 . C . PASS END=46860198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 46860199 . A . PASS END=46860204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 46860205 . T . PASS END=46860205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 46860206 . C . PASS END=46860215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:16,0 chr1 46865040 . T C, 266.25 PASS DP=73;MQ=249.99;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,73,0:1.000,0.000:73:0,37,0:0,36,0:216:304,219,0,2797,219,2797:255,220,0:0,0:2.6625e+02,2.1625e+02,0.0000e+00,4.5000e+02,2.5102e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,44,29:0,0,42,31 chr1 46865671 . A G, 250.73 PASS DP=68;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,35,0:0,33,0:201:289,204,0,2562,204,2562:255,204,0:0,0:2.5073e+02,2.0073e+02,0.0000e+00,4.5000e+02,2.3550e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,31:0,0,32,36 chr1 46867763 . A . PASS END=46867763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 46867764 . A . PASS END=46867775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:17,0 chr1 46867776 . A . PASS END=46867776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 46867777 . C . PASS END=46867797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 46867798 . G . PASS END=46867798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 46867799 . C . PASS END=46867826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 46867827 . A . PASS END=46867840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 46867841 . G . LowGQ END=46867843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,473:0,0,255:12,2 chr1 46867844 . C . PASS END=46867860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 46867861 . C . PASS END=46867876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 46870686 . G . PASS END=46870698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:33:0,94,1288:0,94,255:38,0 chr1 46870699 . A . PASS END=46870699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:37,0 chr1 46870700 . C . PASS END=46870817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,90,255:40,0 chr1 46870818 . A . PASS END=46870820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:25,0 chr1 46871044 . G . PASS END=46871050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,919:0,78,255:26,0 chr1 46871051 . A . PASS END=46871059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:29,0 chr1 46871060 . T . PASS END=46871060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 46871061 . G . PASS END=46871063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:31,0 chr1 46871064 . C . PASS END=46871064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:30,0 chr1 46871065 . T . PASS END=46871067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 46871068 . A . PASS END=46871068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 46871069 . G . PASS END=46871069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr1 46871070 . C . PASS END=46871070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr1 46871071 . C . PASS END=46871072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1143:0,96,255:32,0 chr1 46871073 . G . PASS END=46871073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 46871074 . A . PASS END=46871083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1282:0,105,255:35,0 chr1 46871084 . T . PASS END=46871084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:32,0 chr1 46871085 . G . PASS END=46871091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1310:0,92,255:34,0 chr1 46871092 . G . PASS END=46871092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1287:0,53,255:33,0 chr1 46871093 . A . PASS END=46871100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1388:0,98,255:35,0 chr1 46871101 . A . PASS END=46871101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1182:0,56,255:32,0 chr1 46871102 . G . PASS END=46871119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1286:0,89,255:36,0 chr1 46871120 . T . PASS END=46871120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 46871121 . G . PASS END=46871141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:31:0,82,1125:0,82,255:33,0 chr1 46871142 . C . PASS END=46871142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 46871143 . T . PASS END=46871143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 46871144 . T . PASS END=46871147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1045:0,60,255:28,0 chr1 46871148 . G . PASS END=46871148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1075:0,49,255:26,0 chr1 46871149 . C . PASS END=46871150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 46871151 . C . PASS END=46871151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1105:0,68,255:27,0 chr1 46871152 . A . PASS END=46871153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:29,0 chr1 46871154 . C . PASS END=46871154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:26,0 chr1 46871155 . A . PASS END=46871155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 46871156 . A . PASS END=46871156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1008:0,35,255:25,0 chr1 46871157 . T . PASS END=46871157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 46871158 . G . LowGQ END=46871158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:0:32:0,0,881:9,0,255:24,0 chr1 46871159 . T . PASS END=46871159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:28,0 chr1 46871160 . T . PASS END=46871160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:8:32:0,8,975:0,8,255:25,0 chr1 46871161 . C . PASS END=46871161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 46871162 . C . PASS END=46871162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:27,0 chr1 46871163 . A . PASS END=46871163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 46871164 . C . PASS END=46871164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 46871165 . A . PASS END=46871165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:26,0 chr1 46871166 . G . PASS END=46871166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 46871167 . T . PASS END=46871168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 46871169 . C . PASS END=46871169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:26,0 chr1 46871170 . A . PASS END=46871170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,877:0,35,255:26,0 chr1 46871171 . T . PASS END=46871171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 46871172 . G . PASS END=46871172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:26,0 chr1 46871173 . T . PASS END=46871175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr1 46871176 . A . PASS END=46871176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,774:0,21,255:24,0 chr1 46871177 . G . PASS END=46871177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 46871260 . C . PASS END=46871269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:24,0 chr1 46871270 . A . PASS END=46871270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 46871271 . G . PASS END=46871280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,946:0,67,255:27,0 chr1 46871281 . C . PASS END=46871283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 46871284 . T . PASS END=46871284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 46871285 . G . PASS END=46871289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1111:0,90,255:30,0 chr1 46871290 . G . PASS END=46871291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 46871292 . C . PASS END=46871294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 46871295 . T . PASS END=46871368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:26,0 chr1 46871369 . T . PASS END=46871369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:20,1 chr1 46871370 . C . PASS END=46871370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:43:26:0,43,912:0,43,255:20,1 chr1 46871371 . C . PASS END=46871371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:21,0 chr1 46871372 . C . PASS END=46871390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:22,0 chr1 46871391 . A . PASS END=46871421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 46871422 . C . PASS END=46871464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 46871465 . A . PASS END=46871465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 46871466 . G . PASS END=46871466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 46871710 . C . PASS END=46871710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46871711 . A . PASS END=46871711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:27,0 chr1 46871712 . A . PASS END=46871727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 46871728 . C . PASS END=46871728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 46871729 . T . PASS END=46871750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1169:0,80,255:32,0 chr1 46871916 . T . PASS END=46871948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr1 46871949 . T . PASS END=46871972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,576:0,41,255:19,0 chr1 46871973 . G . PASS END=46871980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 46871981 . C . PASS END=46871985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46871986 . T C, 106.73 PASS DP=20;MQ=247.12;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,8,0:0,12,0:57:145,60,0,738,60,738:255,60,0:0,0:1.0673e+02,5.6729e+01,9.3190e-06,4.5000e+02,9.1499e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,14:0,0,10,10 chr1 46871987 . G . PASS END=46872010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 46872011 . A . PASS END=46872023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,520:0,31,255:13,0 chr1 46872024 . T . PASS END=46872040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 46874131 . G . PASS END=46874151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:24,0 chr1 46874152 . C . PASS END=46874152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 46874153 . T . PASS END=46874168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:26,0 chr1 46874169 . T . PASS END=46874182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 46874183 . A . PASS END=46874184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 46874185 . A . PASS END=46874192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 46874193 . C . PASS END=46874193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 46874194 . T . PASS END=46874201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 46874202 . C . PASS END=46874239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 46874240 . A . PASS END=46874240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 46874241 . G . PASS END=46874243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 46874244 . T . PASS END=46874256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:19,0 chr1 46874773 . C . PASS END=46874799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1097:0,80,255:35,0 chr1 46874800 . C . PASS END=46874800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 46874801 . C . PASS END=46874803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:36,0 chr1 46874804 . A . PASS END=46874804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:36,0 chr1 46874805 . T . PASS END=46874805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:33:37:0,33,1182:0,33,255:35,0 chr1 46874806 . G . PASS END=46874808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:37,0 chr1 46874809 . C . PASS END=46874870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1139:0,80,255:39,0 chr1 46876070 . C . PASS END=46876110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:35:0,95,1224:0,95,255:40,0 chr1 46876111 . C . PASS END=46876111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1520:0,77,255:40,0 chr1 46876112 . A . PASS END=46876169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:38:0,96,1440:0,107,255:40,0 chr1 46876486 . C . PASS END=46876486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr1 46876487 . T . PASS END=46876521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1072:0,80,255:31,0 chr1 46876522 . T . PASS END=46876522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 46876523 . C . PASS END=46876526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 46877284 . T . PASS END=46877291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:98:51:0,98,1701:0,98,255:40,0 chr1 46877292 . G . PASS END=46877292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:58:51:0,58,1623:0,58,255:40,0 chr1 46877293 . A . PASS END=46877323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,100,1607:0,100,255:40,0 chr1 46877815 . G . PASS END=46877836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1074:0,90,255:37,0 chr1 46877837 . C . PASS END=46877837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:36,0 chr1 46877838 . C . PASS END=46877878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,86,255:39,0 chr1 46877879 . T . PASS END=46877879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1129:0,66,255:26,0 chr1 46877880 . G . PASS END=46877882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1215:0,83,255:27,0 chr1 46877883 . G . PASS END=46877906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 46877907 . C . PASS END=46877913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 46877914 . A . PASS END=46877914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:18,0 chr1 46877915 . G . PASS END=46877923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:17,0 chr1 46878747 . G . PASS END=46878752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 46878753 . T . PASS END=46878763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:19,0 chr1 46878764 . A . PASS END=46878766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 46878767 . C . PASS END=46878768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 46878769 . G . PASS END=46878769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 46878770 . T . PASS END=46878892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:29:0,87,1102:0,87,255:40,0 chr1 46879119 . G . PASS END=46879131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,876:0,72,255:25,0 chr1 46879132 . G . PASS END=46879133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:27,0 chr1 46879134 . G . PASS END=46879134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 46879135 . T . PASS END=46879136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 46879137 . G . PASS END=46879137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 46879138 . G . PASS END=46879140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 46879141 . T . PASS END=46879148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,951:0,65,255:26,0 chr1 46879149 . G . PASS END=46879184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1117:0,82,255:37,0 chr1 46879185 . T . PASS END=46879186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1204:0,61,255:33,0 chr1 46879187 . G . PASS END=46879193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1166:0,88,255:35,0 chr1 46879194 . C . PASS END=46879194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1187:0,66,255:34,0 chr1 46879195 . G . PASS END=46879209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1230:0,91,255:36,0 chr1 46879210 . T . PASS END=46879210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:34,0 chr1 46879211 . G . PASS END=46879223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1211:0,88,255:35,0 chr1 46879224 . A . PASS END=46879224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr1 46879225 . C . PASS END=46879244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:33,0 chr1 46879245 . T . PASS END=46879247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 46879562 . T G, 130.81 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,12,0:0,16,0:81:169,84,0,1050,84,1050:255,84,0:0,0:1.3081e+02,8.0810e+01,0.0000e+00,4.5000e+02,1.1558e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,14:0,0,22,6 chr1 46972683 . A . PASS END=46972685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 46972686 . C . PASS END=46972708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,806:0,63,255:26,0 chr1 46972709 . C . PASS END=46972713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 46972714 . T . PASS END=46972714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 46972715 . G . PASS END=46972721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr1 46972722 . A . PASS END=46972722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 46972723 . T . PASS END=46972723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 46972724 . G . PASS END=46972724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 46972725 . A . PASS END=46972731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1056:0,90,255:30,0 chr1 46972732 . T . PASS END=46972732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 46972733 . C . PASS END=46972772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:32,0 chr1 46972773 . G . PASS END=46972791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,923:0,64,255:26,0 chr1 46972792 . A . PASS END=46972792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46972793 . C . PASS END=46972812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 46972813 . T . PASS END=46972813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 46972814 . T . PASS END=46972817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46972818 . T . PASS END=46972830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 46972831 . T . PASS END=46972833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 46972834 . C . PASS END=46972836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr1 46976132 . G . PASS END=46976323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:38:0,93,1395:0,96,255:40,0 chr1 46976324 . C . PASS END=46976324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:31,0 chr1 46976325 . A . PASS END=46976326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,98,255:32,0 chr1 46976607 . G . PASS END=46976609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 46976610 . T . PASS END=46976616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 46976617 . A . PASS END=46976620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46976621 . C . PASS END=46976623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46976624 . C . PASS END=46976626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 46976627 . G . PASS END=46976633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 46976634 . T . PASS END=46976634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 46976635 . T . PASS END=46976642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 46976643 . A . PASS END=46976643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 46976644 . A . PASS END=46976651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:30,0 chr1 46976652 . A . PASS END=46976652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 46976653 . G . PASS END=46976660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:30,0 chr1 46976661 . A . PASS END=46976661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:27,0 chr1 46976662 . A . PASS END=46976662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 46976663 . G . PASS END=46976663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 46976664 . G . PASS END=46976679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1135:0,80,255:31,0 chr1 46976680 . A . PASS END=46976682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 46976683 . A . PASS END=46976683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 46976684 . G . PASS END=46976700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1177:0,80,255:29,0 chr1 46976701 . A . PASS END=46976716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 46976717 . C T, 48.86 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=1.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:9,7,0:7,5,0:47:84,0,50,421,533,954:255,0,255:16,0:4.8865e+01,7.8176e-05,5.3000e+01,4.2118e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,3,9:7,9,6,6 chr1 46976718 . G . PASS END=46976718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 46976719 . A . PASS END=46976733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:26,0 chr1 46976734 . A . PASS END=46976735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 46976736 . A . PASS END=46976737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 46976738 . C . PASS END=46976740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 46976741 . G . PASS END=46976754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 46976755 . A . PASS END=46976755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 46976756 . G . PASS END=46976756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 46976757 . C . PASS END=46976757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 46976758 . C . PASS END=46976769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 46976770 . C . PASS END=46976770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:19,0 chr1 46976771 . T . PASS END=46976774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 46976775 . A . PASS END=46976775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 46976776 . G . PASS END=46976783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,756:0,66,255:22,0 chr1 46976784 . C . PASS END=46976784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 46976785 . C . PASS END=46976787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 46976788 . C . PASS END=46976788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr1 46976789 . T . PASS END=46976799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 46976800 . T . PASS END=46976800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,727:0,50,255:20,0 chr1 46976801 . G . PASS END=46976803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 46976804 . T . PASS END=46976804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 46976805 . C . PASS END=46976805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 46976806 . T . PASS END=46976806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:19,0 chr1 46976807 . G . PASS END=46976825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 46976826 . G . PASS END=46976835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 46976836 . C . PASS END=46976838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 46976839 . A . PASS END=46976843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46976844 . C . PASS END=46976844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 46976845 . A . PASS END=46976845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 46976846 . G . PASS END=46976851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 46976852 . C . PASS END=46976852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46976853 . C . PASS END=46976853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:18,0 chr1 46976854 . G . PASS END=46976898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 46976899 . A . PASS END=46976902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 46976903 . C . PASS END=46976903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 46976904 . C . PASS END=46976908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 46976909 . G . PASS END=46976919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:15,0 chr1 46976920 . A . PASS END=46976951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 46976952 . G . PASS END=46976952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:9,0 chr1 46976953 . C . PASS END=46976955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 46977715 . A . PASS END=46977740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 46977741 . C . PASS END=46977755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 46977756 . G . PASS END=46977756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 46977757 . G . PASS END=46977765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,402:0,33,255:11,0 chr1 46977766 . T . PASS END=46977766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 46977767 . G . PASS END=46977778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 46977779 . C . PASS END=46977803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,543:0,42,255:19,0 chr1 46977804 . C . PASS END=46977805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 46977806 . C . PASS END=46977806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 46977807 . T . PASS END=46977816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 46977817 . A . PASS END=46977827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46977828 . C . PASS END=46977829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 46977830 . C . PASS END=46977864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,53,255:19,0 chr1 46977865 . A . PASS END=46977866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr1 46977867 . T . PASS END=46977867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 46977868 . C . PASS END=46977868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46977869 . G . PASS END=46977871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 46977872 . C . PASS END=46977872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 46977873 . T . PASS END=46977874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,574:0,18,255:17,0 chr1 46977875 . C . PASS END=46977875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 46977876 . G . PASS END=46977876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 46977877 . A . PASS END=46977877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 46977878 . A . PASS END=46977879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 46977880 . T . PASS END=46977880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,593:0,21,255:18,0 chr1 46977881 . A . PASS END=46977882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 46977883 . G . PASS END=46977887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:17,0 chr1 46977888 . C . PASS END=46977888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 46977889 . C . PASS END=46977891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,698:0,21,255:18,0 chr1 46977892 . C . PASS END=46977892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 46977893 . C . PASS END=46977893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 46977894 . C . PASS END=46977895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 46977896 . T . PASS END=46977902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 46977903 . G . PASS END=46977907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 46977908 . G . LowGQ END=46977908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,643:14,0,255:19,0 chr1 46977909 . G . PASS END=46977919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:22,0 chr1 46977920 . T . PASS END=46977928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 46977929 . C . PASS END=46977947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 46977948 . C . PASS END=46978151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1172:0,84,255:40,0 chr1 46978152 . A . PASS END=46978152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1239:0,67,255:29,0 chr1 46978153 . C . PASS END=46978163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1170:0,83,255:30,0 chr1 46978164 . T . PASS END=46978164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 46978165 . G . PASS END=46978166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 46998666 . C . PASS END=46998666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 46998667 . T . PASS END=46998668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:5,0 chr1 46998669 . G . PASS END=46998669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 46998670 . G . PASS END=46998670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 46998671 . G . PASS END=46998673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 46998674 . C . PASS END=46998678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 46998679 . C . PASS END=46998679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 46998680 . G . PASS END=46998682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 46998683 . C . PASS END=46998683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 46998684 . C . PASS END=46998685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 46998686 . G . PASS END=46998693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 46998694 . T . PASS END=46998694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 46998695 . T . PASS END=46998712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 46998713 . A . PASS END=46998713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46998714 . G . PASS END=46998716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 46998717 . C . PASS END=46998720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 46998721 . G . PASS END=46998721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 46998722 . C . PASS END=46998732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 46998733 . G . PASS END=46998733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 46998734 . C . PASS END=46998764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 46998765 . G . PASS END=46998800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 46998801 . G . PASS END=46998802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 46998803 . C . PASS END=46998803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 46998804 . G . PASS END=46998810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 46998811 . C . PASS END=46998814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 46998815 . G . PASS END=46998815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 46998816 . C . PASS END=46998820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 46998821 . C . PASS END=46998828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 46998829 . G . PASS END=46998833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:10:0,12,180:0,30,255:5,0 chr1 46998834 . C . LowGQ END=46998930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,45:0,0,69:3,0 chr1 46998931 . G . PASS END=46998934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 46998935 . C . PASS END=46998935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 46998936 . G . PASS END=46998936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 46998937 . A . PASS END=46998952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr1 46998953 . A . PASS END=46998963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 46998964 . G . PASS END=46999019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,446:0,41,255:19,0 chr1 46999020 . G . PASS END=46999020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 46999021 . T . PASS END=46999068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 46999069 . A . PASS END=46999069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 46999070 . C . PASS END=46999070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 46999071 . G . PASS END=46999092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 46999093 . C . PASS END=46999096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 46999097 . A . PASS END=46999097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:8,0 chr1 46999098 . G . PASS END=46999103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:18:13:0,18,270:0,23,255:6,0 chr1 46999104 . G . PASS END=46999104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 46999105 . C . PASS END=46999105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:9,0 chr1 46999106 . A . PASS END=46999106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:9,0 chr1 46999107 . C . PASS END=46999107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 46999108 . A . LowGQ END=46999108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:9,0 chr1 46999109 . G . PASS END=46999129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 46999130 . G . PASS END=46999192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr1 46999193 . G . PASS END=46999199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,147:3,0 chr1 47013402 . T . PASS END=47013481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,130,255:40,0 chr1 47014865 . C . PASS END=47014884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1134:0,86,255:36,0 chr1 47014885 . C . PASS END=47014885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:35,0 chr1 47014886 . T . PASS END=47014888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:36,0 chr1 47014889 . A . PASS END=47014889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1160:0,69,255:34,0 chr1 47014890 . T . PASS END=47014912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:35:0,81,1183:0,81,255:37,0 chr1 47014913 . C . PASS END=47014939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:26,0 chr1 47015606 . C . PASS END=47015674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1319:0,81,255:40,0 chr1 47016737 . C . PASS END=47016739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 47016740 . G . PASS END=47016753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 47016754 . A . PASS END=47016754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr1 47016755 . T . PASS END=47016783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,892:0,63,255:25,0 chr1 47016784 . T . PASS END=47016784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 47016785 . T . PASS END=47016805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 47016806 . T . PASS END=47016806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 47016807 . G . PASS END=47016821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 47016822 . C . PASS END=47016822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 47016823 . A . PASS END=47016837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 47016838 . C . PASS END=47016848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:17,0 chr1 47016849 . C . PASS END=47016859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 47016860 . A . PASS END=47016860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 47016861 . G . PASS END=47016878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 47016879 . G . PASS END=47016881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 47016882 . G . PASS END=47016887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 47024247 . T . PASS END=47024251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 47024252 . G . PASS END=47024285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,360:0,33,255:13,0 chr1 47024286 . T . PASS END=47024286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 47024287 . G . PASS END=47024296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr1 47024297 . G . PASS END=47024327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:18,0 chr1 47024328 . G . PASS END=47024328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 47024329 . G . PASS END=47024346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,659:0,41,255:17,0 chr1 47024347 . G . PASS END=47024348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 47024349 . G . PASS END=47024351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 47024352 . G . PASS END=47024354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 47024355 . G . PASS END=47024365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 47024366 . G . PASS END=47024400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 47024401 . T . PASS END=47024402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 47024403 . C . PASS END=47024412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 47024413 . T . PASS END=47024417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 47024418 . G . PASS END=47024420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 47024421 . A . PASS END=47024424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 47024425 . G . PASS END=47024427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 47024428 . A . PASS END=47024450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 47024451 . C . PASS END=47024454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 47024455 . T . PASS END=47024466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 47024467 . C . PASS END=47024472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 47025906 . C . PASS END=47025949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,106,1429:0,106,255:40,0 chr1 47027150 . C . PASS END=47027295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1186:0,83,255:40,0 chr1 47027296 . T . PASS END=47027308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:26:0,69,1035:0,76,255:26,0 chr1 47027309 . C . PASS END=47027314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 47028321 . C . PASS END=47028327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 47028328 . A . PASS END=47028385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:14:0,40,490:0,40,255:19,0 chr1 47028386 . G . PASS END=47028400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 47028401 . G . PASS END=47028401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 47028402 . C . PASS END=47028411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 47028412 . A . PASS END=47028412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 47028413 . G . PASS END=47028414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 47028415 . A . PASS END=47028415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,1 chr1 47028416 . C . PASS END=47028417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,917:0,42,255:27,1 chr1 47028418 . A . PASS END=47028423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 47028424 . A . PASS END=47028427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 47028428 . T . PASS END=47028438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,994:0,68,255:26,0 chr1 47028439 . C . PASS END=47028440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 47028441 . G . PASS END=47028441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr1 47028442 . C . PASS END=47028443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 47028444 . C . PASS END=47028444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:26,0 chr1 47028445 . T . PASS END=47028445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,997:0,74,255:26,0 chr1 47028446 . T . PASS END=47028449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 47028450 . G . PASS END=47028450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:25,0 chr1 47028451 . T . PASS END=47028452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 47028453 . G . PASS END=47028455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,897:0,67,255:26,0 chr1 47028456 . T . PASS END=47028456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 47028457 . G . PASS END=47028471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,895:0,64,255:26,0 chr1 47028472 . A . PASS END=47028472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,847:0,34,255:23,0 chr1 47028473 . A . PASS END=47028492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,832:0,61,255:26,0 chr1 47028493 . G . PASS END=47028493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 47028494 . C . PASS END=47028494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:26,0 chr1 47028495 . C . PASS END=47028495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 47028496 . A . PASS END=47028496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 47028497 . T . PASS END=47028498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,867:0,81,255:27,0 chr1 47028499 . T . PASS END=47028509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 47028510 . G . PASS END=47028510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:24,0 chr1 47028511 . C . PASS END=47028514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,917:0,64,255:25,0 chr1 47028515 . A . PASS END=47028515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,784:0,45,255:21,0 chr1 47028740 . T . PASS END=47028785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1178:0,83,255:40,0 chr1 47028786 . A . PASS END=47028786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1226:0,78,255:39,0 chr1 47028787 . A . PASS END=47028817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,99,1402:0,101,255:40,0 chr1 47030713 . T . PASS END=47030808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1180:0,83,255:40,0 chr1 47034115 . C . PASS END=47034170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:81:0,120,1800:0,219,255:40,0 chr1 47037735 . C . PASS END=47037839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:33:0,85,1217:0,85,255:40,0 chr1 47040619 . C . PASS END=47040692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:68:0,120,1800:0,172,255:40,0 chr1 47042247 . T . PASS END=47042326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:38:0,108,1419:0,112,255:40,0 chr1 47046160 . C . PASS END=47046299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:43:0,96,1437:0,96,255:40,0 chr1 47048549 . C . PASS END=47048549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 47048550 . T . PASS END=47048595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,568:0,48,255:19,0 chr1 47048900 . C . PASS END=47048909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,886:0,81,255:27,0 chr1 47048910 . T . PASS END=47048910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 47048911 . C . PASS END=47048912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 47048913 . T . PASS END=47048913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 47048914 . G . PASS END=47048925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 47048926 . G . PASS END=47048927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 47048928 . G . PASS END=47048940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 47048941 . C . PASS END=47048945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 47048946 . C . PASS END=47048947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47048948 . T . PASS END=47048951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 47048952 . C . PASS END=47048956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 47048957 . T . PASS END=47048958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 47048959 . C . PASS END=47048959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 47048960 . T . PASS END=47048961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 47048962 . T . PASS END=47048967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 47048968 . T . PASS END=47048968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,932:0,48,255:28,0 chr1 47048969 . C . PASS END=47048970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 47048971 . G . PASS END=47048971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 47048972 . C . PASS END=47048975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 47048976 . G . PASS END=47048976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 47048977 . G . PASS END=47048978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 47048979 . A . PASS END=47048979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 47048980 . A . PASS END=47048981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 47048982 . G . PASS END=47049000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,856:0,61,255:26,0 chr1 47049001 . T . PASS END=47049001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,849:0,45,255:23,0 chr1 47050130 . C . PASS END=47050135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,104,1702:0,104,255:40,0 chr1 47050136 . T . PASS END=47050136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:41:56:0,41,1622:0,41,255:38,0 chr1 47050137 . A . PASS END=47050142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:97:56:0,97,1800:0,97,255:40,0 chr1 47050143 . A . PASS END=47050143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:66:60:0,66,1681:0,66,255:37,0 chr1 47050144 . G . PASS END=47050147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,4:66:84:64:0,84,1800:0,84,255:40,0 chr1 47050148 . C . PASS END=47050148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,6:65:22:65:0,22,1798:0,22,255:39,0 chr1 47050149 . T . PASS END=47050160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:93:65:0,93,1800:0,93,255:40,0 chr1 47050161 . G . LowGQ END=47050164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,18:75:0:69:0,0,473:108,0,255:40,42 chr1 47050165 . T . PASS END=47050165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,4:70:63:70:0,63,2357:0,63,255:40,2 chr1 47050166 . T . PASS END=47050212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,109,1800:0,109,255:40,1 chr1 47050213 . T . PASS END=47050246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:96:59:0,96,1440:0,123,255:40,0 chr1 47050247 . T . PASS END=47050247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:30:49:0,30,1455:0,30,255:32,0 chr1 47050248 . C . PASS END=47050263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1260:0,81,255:36,0 chr1 47050264 . G . PASS END=47050270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:32:0,75,1125:0,96,255:26,0 chr1 47051546 . C . PASS END=47051561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,188,255:40,0 chr1 47059785 . C . PASS END=47059896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,120,1800:0,136,255:40,0 chr1 47059897 . G . PASS END=47059933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:42:0,99,1485:0,126,255:40,0 chr1 47059934 . T C, 167.38 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,20,0:0,20,0:117:205,120,0,1526,120,1526:255,120,0:0,0:1.6738e+02,1.1738e+02,0.0000e+00,4.5000e+02,1.5215e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,30:0,0,20,20 chr1 47059935 . G . PASS END=47059952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,91,255:34,0 chr1 47075327 . T . PASS END=47075356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,101,1404:0,101,255:40,0 chr1 47075674 . C . PASS END=47075686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 47075687 . T . PASS END=47075687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 47075688 . C . PASS END=47075693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 47075694 . G . PASS END=47075694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr1 47075695 . G . PASS END=47075701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1271:0,99,255:33,0 chr1 47075702 . A . PASS END=47075702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:32,0 chr1 47075703 . G . PASS END=47075758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1233:0,86,255:36,0 chr1 47075759 . T . PASS END=47075759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:32,0 chr1 47075760 . C . PASS END=47075792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1110:0,85,255:35,0 chr1 47075793 . G . PASS END=47075812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:25:0,69,954:0,75,255:26,0 chr1 47075813 . A . PASS END=47075820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 47075821 . G . PASS END=47075855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 47075856 . A . PASS END=47075856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 47075857 . G . PASS END=47075869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 47075870 . G . PASS END=47075876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 47078576 . C . PASS END=47078599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:25,0 chr1 47078600 . C . PASS END=47078601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 47078602 . T . PASS END=47078604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 47078605 . T . PASS END=47078605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:26,0 chr1 47078606 . T . PASS END=47078610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 47078611 . A . PASS END=47078611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 47078612 . G . PASS END=47078612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 47078613 . G . PASS END=47078614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 47078615 . C . PASS END=47078622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47078623 . C . PASS END=47078626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:27:0,74,1092:0,74,255:26,0 chr1 47078627 . C . PASS END=47078627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 47078628 . C . PASS END=47078628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 47078629 . A . PASS END=47078632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 47078633 . G . PASS END=47078636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:25,0 chr1 47078637 . T C, 139.84 PASS DP=31;MQ=249.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,14,0:0,17,0:90:178,93,0,1173,93,1173:255,93,0:0,0:1.3984e+02,8.9842e+01,0.0000e+00,4.5000e+02,1.2461e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,16:0,0,16,15 chr1 47078638 . G . PASS END=47078674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,833:0,61,255:25,0 chr1 47078675 . G . PASS END=47078680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 47078681 . G . PASS END=47078681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 47078682 . G . PASS END=47078742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:24,0 chr1 47078743 . T . PASS END=47078743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 47078744 . C . PASS END=47078761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,930:0,62,255:23,0 chr1 47078762 . T . PASS END=47078762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 47078763 . A . PASS END=47078764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 47078765 . T . PASS END=47078765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:19,0 chr1 47078766 . G . PASS END=47078775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 47078776 . A . PASS END=47078776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 47078777 . G . PASS END=47078787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 47078788 . T . PASS END=47078788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 47078789 . T . PASS END=47078790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 47078791 . A . PASS END=47078791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 47078792 . A . PASS END=47078794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 47078795 . A . PASS END=47078799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 47078800 . A . PASS END=47078806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 47078807 . G . PASS END=47078862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 47078863 . A . PASS END=47078863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 47078864 . G . PASS END=47078885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 47078886 . G . PASS END=47078886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 47078887 . G . PASS END=47078887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 47078888 . C . PASS END=47078896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:24,0 chr1 47078897 . T . PASS END=47078897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:23,0 chr1 47078898 . C . PASS END=47078918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 47078919 . T . PASS END=47078919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 47078920 . G . PASS END=47078970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,864:0,62,255:26,0 chr1 47078971 . A . PASS END=47078972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 47078973 . C . PASS END=47078973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 47078974 . T . PASS END=47078985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:28,0 chr1 47078986 . A . PASS END=47078989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 47078990 . C . PASS END=47078992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 47078993 . T . PASS END=47079027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 47079028 . C . PASS END=47079052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,668:0,54,255:19,0 chr1 47079053 . A . PASS END=47079053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 47079054 . C . PASS END=47079062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:17,0 chr1 47080643 . A . PASS END=47080644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:14:0,31,543:0,31,255:14,0 chr1 47080645 . A . PASS END=47080646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 47080647 . G . PASS END=47080648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 47080649 . G . PASS END=47080650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 47080651 . A . PASS END=47080651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:16,0 chr1 47080652 . A . PASS END=47080662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:18:0,47,623:0,47,255:20,0 chr1 47080663 . T . PASS END=47080664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 47080665 . C T, 109.74 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,7,0:0,14,0:60:148,63,0,785,63,785:255,63,0:0,0:1.0974e+02,5.9741e+01,4.6595e-06,4.5000e+02,9.4511e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,8:0,0,11,10 chr1 47080666 . A . PASS END=47080674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:26,0 chr1 47080675 . C . PASS END=47080678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:29,0 chr1 47080679 . G A, 133.82 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,12,0:0,17,0:84:172,87,0,272,272,272:255,87,0:0,0:1.3382e+02,8.3816e+01,0.0000e+00,2.6859e+02,3.0336e+02,2.7160e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,10:0,0,18,11 chr1 47080680 . A . PASS END=47080682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1017:0,87,255:30,0 chr1 47080683 . T . PASS END=47080683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:29,0 chr1 47080684 . C . PASS END=47080738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,992:0,83,255:34,0 chr1 47080739 . T . PASS END=47080739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1074:0,55,255:30,0 chr1 47080740 . G . PASS END=47080740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 47080741 . C T, 142.85 PASS DP=33;MQ=250.00;FractionInformativeReads=0.970 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,15,0:0,17,0:93:181,96,0,1210,96,1210:255,99,0:0,0:1.4285e+02,9.2853e+01,0.0000e+00,4.5000e+02,1.2762e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,20:0,0,25,7 chr1 47080742 . G . PASS END=47080748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1103:0,82,255:32,0 chr1 47099437 . T . PASS END=47099482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1239:0,87,255:35,0 chr1 47099483 . G . PASS END=47099484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1250:0,70,255:30,0 chr1 47099485 . T . PASS END=47099494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1016:0,85,255:31,0 chr1 47099495 . G . PASS END=47099495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 47099496 . C . PASS END=47099497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 47099498 . C . PASS END=47099500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,873:0,52,255:26,0 chr1 47101448 . C . PASS END=47101630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:35:0,90,1350:0,105,255:40,0 chr1 47101631 . C . PASS END=47101642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:29:0,75,1125:0,87,255:26,0 chr1 47108866 . C . PASS END=47108973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:34:0,89,1271:0,89,255:40,0 chr1 47110833 . C . PASS END=47110928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:56:0,120,1800:0,152,255:40,0 chr1 47118253 . T . PASS END=47118300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:80:0,120,1800:0,223,255:40,0 chr1 47119489 . A . PASS END=47119539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:63:0,120,1800:0,151,255:40,0 chr1 47123799 . C . PASS END=47123853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,149,255:40,0 chr1 47123854 . C . PASS END=47123861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:62:0,120,1800:0,153,255:40,0 chr1 47124359 . C . PASS END=47124409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:57:0,120,1800:0,124,255:40,0 chr1 47129569 . C . PASS END=47129570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47129571 . A . PASS END=47129571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 47129572 . C . PASS END=47129572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47129573 . A . PASS END=47129585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:24,0 chr1 47129586 . G . PASS END=47129586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 47129587 . T . PASS END=47129587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 47129588 . G . PASS END=47129588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 47129589 . C . PASS END=47129591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 47129592 . C . PASS END=47129595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 47130928 . C . PASS END=47131039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:38:0,93,1395:0,114,255:40,0 chr1 47131040 . A . PASS END=47131040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:31,0 chr1 47131041 . T . PASS END=47131044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1260:0,114,255:29,0 chr1 47131319 . A . PASS END=47131320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 47133729 . C . PASS END=47133733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 47133734 . C . PASS END=47133768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 47133769 . A . PASS END=47133769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 47133770 . A . LowGQ END=47133810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,1:3:0:3:0,0,61:0,0,69:3,0 chr1 47133811 . T C, 41.57 PASS DP=2;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,0,0:0,2,0:5:78,6,0,78,6,78:94,9,0:0,0:4.1570e+01,4.7781e+00,1.7586e+00,7.6340e+01,3.9548e+01,7.9340e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,0:0,0,0,2 chr1 47133812 . G . LowGQ END=47133838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,1:4:0:3:0,0,0:0,0,5:3,1 chr1 47133839 . G . PASS END=47133839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 47133840 . C . LowGQ END=47133840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr1 47133841 . C . PASS END=47133841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:4,0 chr1 47133842 . G . LowGQ END=47133842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 47133843 . G . PASS END=47133845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 47133846 . C . LowGQ END=47133846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr1 47133847 . G . PASS END=47133848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,127:4,0 chr1 47133849 . A . LowGQ END=47133851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,2:5:0:5:0,0,61:2,0,79:4,0 chr1 47133852 . G . PASS END=47133853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 47133854 . G . LowGQ END=47133858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,139:0,0,172:6,0 chr1 47133859 . C . PASS END=47133861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,243:8,0 chr1 47133862 . G . LowGQ END=47133862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,192:9,0,201:6,0 chr1 47133863 . C . PASS END=47133865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,213:0,24,213:9,0 chr1 47133866 . C . PASS END=47133867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:7,0 chr1 47133868 . G . PASS END=47133871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 47133872 . G . PASS END=47133873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:11:9:0,11,288:0,11,255:8,0 chr1 47133874 . G . PASS END=47133874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 47133875 . T . LowGQ END=47133875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:8,0 chr1 47133876 . G . PASS END=47133881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 47133882 . A . PASS END=47133882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 47133883 . G . PASS END=47133884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 47133885 . C . PASS END=47133887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr1 47133888 . A . PASS END=47133888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 47133889 . G . PASS END=47133898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 47133899 . G . PASS END=47133901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 47133902 . G . PASS END=47133913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr1 47133914 . G . PASS END=47133915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 47133916 . A . PASS END=47133916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 47133917 . C . PASS END=47133931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 47133932 . A . PASS END=47133932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 47133933 . C . PASS END=47133971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 47133972 . G . PASS END=47133972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr1 47133973 . C . PASS END=47133981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 47133982 . C . PASS END=47133982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 47133983 . C . PASS END=47133983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 47133984 . A . PASS END=47133984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 47133985 . C . PASS END=47133987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 47133988 . C . PASS END=47133988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 47133989 . A . PASS END=47133990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 47133991 . C . PASS END=47134000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 47134001 . C . PASS END=47134004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 47134005 . G . PASS END=47134013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:13:0,24,360:0,39,255:8,0 chr1 47134014 . T . PASS END=47134014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 47134015 . C . PASS END=47134025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:7,0 chr1 47134026 . G . LowGQ END=47134027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 47134028 . G . PASS END=47134047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 47134048 . C . PASS END=47134048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 47134049 . G . PASS END=47134052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr1 47134053 . G . PASS END=47134059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:1:6:0,1,90:0,1,177:2,0 chr1 47134060 . C . PASS END=47134063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:6:0,6,90:0,18,180:2,0 chr1 47135111 . A . PASS END=47135150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:44:0,91,1491:0,91,255:40,0 chr1 47137607 . A . PASS END=47137643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1180:0,90,255:31,0 chr1 47138545 . T . PASS END=47138683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:36:0,81,1215:0,92,255:40,0 chr1 47138684 . A . PASS END=47138684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 47138685 . T . PASS END=47138685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 47138686 . T . PASS END=47138692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,86,255:26,0 chr1 47138693 . C . PASS END=47138696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 47138697 . C . PASS END=47138697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 47138698 . C . PASS END=47138698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 47138699 . A . PASS END=47138699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:26,0 chr1 47138700 . T . PASS END=47138707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 47138708 . C . PASS END=47138709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 47138710 . G . PASS END=47138715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 47138716 . A . PASS END=47138719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 47138720 . G . PASS END=47138721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 47138722 . G . PASS END=47138751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,68,255:25,0 chr1 47138752 . A . PASS END=47138752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 47138753 . C . PASS END=47138753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 47138754 . A . PASS END=47138768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,56,255:19,0 chr1 47138769 . G . PASS END=47138792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:22,0 chr1 47138793 . G . PASS END=47138821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr1 47138822 . G . PASS END=47138825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 47138826 . A . PASS END=47138863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,637:0,51,255:19,0 chr1 47138864 . C . PASS END=47138866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 47138867 . C . PASS END=47138870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 47138871 . G . PASS END=47138897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 47138898 . G . PASS END=47138898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 47138899 . C . PASS END=47138908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 47138909 . G . PASS END=47138920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 47138921 . G . PASS END=47138932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:24,0 chr1 47138933 . A . PASS END=47138933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 47138934 . T . PASS END=47138939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 47138940 . T . PASS END=47138940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 47138941 . T . PASS END=47138952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,922:0,72,255:24,0 chr1 47138953 . T . PASS END=47138953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 47138954 . C . PASS END=47138958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 47138959 . A . PASS END=47138959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 47138960 . G . PASS END=47138970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 47138971 . T . PASS END=47138971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 47138972 . T . PASS END=47138980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,884:0,69,255:26,0 chr1 47138981 . C . PASS END=47138981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 47138982 . T . PASS END=47138982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 47138983 . T . PASS END=47138983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 47138984 . G . PASS END=47138984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 47138985 . T . PASS END=47138992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1009:0,84,255:30,0 chr1 47138993 . A . PASS END=47138993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 47138994 . C . PASS END=47139013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1088:0,80,255:31,0 chr1 47139014 . T . PASS END=47139014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:27,0 chr1 47139015 . G . PASS END=47139038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:33,0 chr1 47139039 . C . PASS END=47139039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:32,0 chr1 47139040 . C . PASS END=47139098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:31:0,84,1219:0,88,255:36,0 chr1 47139099 . A . PASS END=47139104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:28:0,77,1086:0,77,255:26,0 chr1 47139105 . A . PASS END=47139105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:23,0 chr1 47139106 . A . PASS END=47139115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:25,0 chr1 47139116 . T . PASS END=47139116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 47139117 . T . PASS END=47139124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 47139125 . G . PASS END=47139125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 47139126 . T . PASS END=47139126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 47139127 . A . PASS END=47139128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 47144133 . C . PASS END=47144143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 47144144 . A . PASS END=47144144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 47144145 . A . PASS END=47144148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 47144149 . A . PASS END=47144149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 47144150 . C . PASS END=47144159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr1 47144160 . C . PASS END=47144160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 47144161 . A . PASS END=47144165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 47144166 . T . PASS END=47144166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 47144167 . G . PASS END=47144198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,909:0,68,255:27,0 chr1 47144199 . T . PASS END=47144203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47144204 . A . PASS END=47144204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 47144205 . G . PASS END=47144207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47144208 . C . PASS END=47144209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 47144210 . C . PASS END=47144219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 47144220 . C . PASS END=47144223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:27,0 chr1 47144224 . G . PASS END=47144225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 47144226 . A . PASS END=47144230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:26,0 chr1 47144231 . C . PASS END=47144234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 47144235 . G . PASS END=47144275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,63,255:26,0 chr1 47144276 . C . PASS END=47144308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,568:0,44,255:19,0 chr1 47145732 . C . PASS END=47145810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:34:0,96,1402:0,101,255:40,0 chr1 47148916 . T . PASS END=47149097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:83:46:0,83,1531:0,83,255:40,0 chr1 47150163 . C . PASS END=47150274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:47:0,120,1800:0,131,255:40,0 chr1 47150755 . C . PASS END=47150816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,162,255:40,0 chr1 47152456 . C . PASS END=47152542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,130,255:40,0 chr1 47154025 . C . PASS END=47154189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:35:0,93,1395:0,104,255:40,0 chr1 47154190 . T . PASS END=47154190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:31,0 chr1 47154191 . A . PASS END=47154202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1201:0,86,255:29,0 chr1 47154203 . A . PASS END=47154207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,74,255:26,0 chr1 47154208 . C . PASS END=47154216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:27:0,45,675:0,81,255:19,0 chr1 47155259 . C . PASS END=47155363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:38:0,84,1260:0,90,255:40,0 chr1 47157499 . C . PASS END=47157609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,165,255:40,0 chr1 47162223 . C . PASS END=47162321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:82:36:0,82,1350:0,82,255:40,0 chr1 47173578 . C . PASS END=47173723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:60:0,120,1800:0,166,255:40,0 chr1 47181967 . T . PASS END=47181971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1307:0,100,255:39,0 chr1 47181972 . C . PASS END=47181972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1197:0,67,255:36,0 chr1 47181973 . G . PASS END=47181986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:39:0,83,1183:0,83,255:40,0 chr1 47181987 . A . PASS END=47181987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1244:0,73,255:36,0 chr1 47181988 . G . PASS END=47182001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:40:0,84,1362:0,84,255:40,0 chr1 47182002 . T . PASS END=47182002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:68:54:0,68,1726:0,68,255:40,0 chr1 47182003 . C . PASS END=47182115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:44:0,84,1578:0,84,255:40,0 chr1 47183575 . T . PASS END=47183587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1118:0,99,255:37,0 chr1 47183588 . A . PASS END=47183588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,1048:0,44,255:33,0 chr1 47183589 . G . PASS END=47183852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1075:0,81,255:40,0 chr1 47264754 . A . PASS END=47264923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:30:0,80,1163:0,80,255:40,0 chr1 47264924 . T . PASS END=47264929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:29:0,66,990:0,73,255:23,0 chr1 47264930 . C . PASS END=47264933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:29:0,51,765:0,87,255:17,0 chr1 47276480 . A . PASS END=47276494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:23,0 chr1 47276495 . A . PASS END=47276617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1156:0,84,255:40,0 chr1 47276618 . G . PASS END=47276621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 47276812 . A . PASS END=47276856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:55:0,120,1800:0,144,255:40,0 chr1 47277849 . G . PASS END=47277866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:26,0 chr1 47277867 . T . PASS END=47277884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 47277885 . C . PASS END=47277891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 47277892 . C . PASS END=47277895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47277896 . A . PASS END=47277896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 47277897 . G . PASS END=47277907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 47277908 . C . PASS END=47277909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 47277910 . G . PASS END=47277915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 47277916 . G . PASS END=47277920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 47277921 . T . PASS END=47277938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 47277939 . A . PASS END=47277939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 47277940 . C . PASS END=47277940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 47277941 . T . PASS END=47277943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 47278168 . G . PASS END=47278170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:37,0 chr1 47278171 . G . PASS END=47278171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:35,0 chr1 47278172 . A . PASS END=47278174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:37:0,94,1205:0,94,255:39,0 chr1 47278175 . C . PASS END=47278175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1296:0,62,255:37,0 chr1 47278176 . C . PASS END=47278182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1426:0,101,255:38,0 chr1 47278183 . T . PASS END=47278183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:37,0 chr1 47278184 . T . PASS END=47278270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:36:0,90,1368:0,90,255:40,0 chr1 47278271 . C . PASS END=47278271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:31,0 chr1 47278272 . A . PASS END=47278273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 47278274 . T . PASS END=47278295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:26:0,60,900:0,62,255:26,0 chr1 47279154 . G . PASS END=47279278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:44:0,89,1350:0,89,255:40,0 chr1 47279581 . C . PASS END=47279588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 47279589 . G . PASS END=47279589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 47279590 . C . PASS END=47279590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 47279591 . A . PASS END=47279594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1205:0,96,255:33,0 chr1 47279595 . A . PASS END=47279595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:32,0 chr1 47279596 . C . PASS END=47279601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1211:0,89,255:35,0 chr1 47279602 . T . PASS END=47279602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:34,0 chr1 47279603 . G . PASS END=47279707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,86,255:40,0 chr1 47279708 . G . PASS END=47279708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 47279709 . C . PASS END=47279709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 47279710 . C . PASS END=47279719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 47279720 . G . PASS END=47279721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr1 47279722 . C . PASS END=47279730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 47279731 . T . PASS END=47279735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:18,0 chr1 47279881 . A . PASS END=47279988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,114,1689:0,117,255:40,0 chr1 47280426 . G . PASS END=47280431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 47280745 . G . PASS END=47280936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:35:0,87,1305:0,92,255:40,0 chr1 47282720 . G . PASS END=47282726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:26,0 chr1 47282727 . C . PASS END=47282774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1048:0,84,255:36,0 chr1 47282775 . C . PASS END=47282775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr1 47282776 . T . PASS END=47282840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1092:0,86,255:40,0 chr1 47282841 . T . PASS END=47282841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1135:0,71,255:29,0 chr1 47282842 . C . PASS END=47282850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1164:0,83,255:30,0 chr1 47282851 . C . PASS END=47282853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1080:0,77,255:26,0 chr1 47283637 . G . PASS END=47283701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,87,255:40,0 chr1 47283803 . G . PASS END=47283885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:37:0,84,1260:0,104,255:40,0 chr1 47284303 . G . PASS END=47284303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr1 47284304 . A . PASS END=47284308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:23,0 chr1 47284309 . C . PASS END=47284309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 47284310 . A . PASS END=47284310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 47284311 . T . PASS END=47284311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 47284312 . T . PASS END=47284320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:24,0 chr1 47284321 . G . PASS END=47284321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:24,0 chr1 47284322 . T . PASS END=47284326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1068:0,74,255:26,0 chr1 47284327 . C . PASS END=47284333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47284334 . G . PASS END=47284334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 47284335 . A . PASS END=47284464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1058:0,82,255:40,0 chr1 47284465 . G . PASS END=47284474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,900:0,96,255:23,0 chr1 47284475 . T . PASS END=47284475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr1 47284476 . C . PASS END=47284477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:20,0 chr1 47284478 . G . PASS END=47284483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:19,0 chr1 47284484 . T . PASS END=47284485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 47284486 . G . PASS END=47284486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 47395787 . T . PASS END=47395792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,834:0,72,255:25,0 chr1 47395793 . C . PASS END=47395793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 47395794 . T . PASS END=47395803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,937:0,62,255:26,0 chr1 47395804 . C . PASS END=47395805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 47395806 . T . PASS END=47395806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 47395807 . C . PASS END=47395808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 47395809 . C . PASS END=47395811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 47395812 . G . PASS END=47395813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1374:0,101,255:37,0 chr1 47395814 . G . PASS END=47395814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:36,0 chr1 47395815 . T . PASS END=47395922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:39:0,92,1412:0,92,255:40,0 chr1 47395923 . A . PASS END=47395931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:36:0,75,1125:0,98,255:26,0 chr1 47395932 . G . PASS END=47395935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:27,0 chr1 47395936 . T . PASS END=47395936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47395937 . G . PASS END=47395949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:26,0 chr1 47395950 . T . PASS END=47395955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:20:0,42,630:0,50,255:19,0 chr1 47395956 . A . PASS END=47395961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:20:0,36,540:0,60,255:13,0 chr1 47395962 . A . PASS END=47395962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 47395963 . A . PASS END=47395963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:16,0 chr1 47395964 . T . PASS END=47395972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 47395973 . G A, 98.12 PASS DP=18;MQ=111.16;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,9,0:0,9,0:51:136,54,0,661,54,661:255,54,0:0,0:9.8116e+01,5.0716e+01,3.6758e-05,4.5000e+02,8.5486e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,14:0,0,11,7 chr1 47395974 . A . PASS END=47395982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 47398429 . T . PASS END=47398509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:72:0,120,1800:0,193,255:40,0 chr1 47398655 . C . PASS END=47398705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,179,255:40,0 chr1 47398706 . G . PASS END=47398719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:81:0,120,1800:0,217,255:40,0 chr1 47398743 . G C, 251.65 PASS DP=69;MQ=152.21;FractionInformativeReads=0.986 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,32,0:0,36,0:202:289,205,0,2615,205,2615:255,208,0:0,0:2.5165e+02,2.0165e+02,0.0000e+00,4.5000e+02,2.3642e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,35:0,0,31,37 chr1 47399618 . C . PASS END=47399795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,102,1537:0,102,255:40,0 chr1 47399796 . A . PASS END=47399796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:53:47:0,53,1510:0,53,255:40,0 chr1 47399797 . G . PASS END=47399803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,113,1701:0,113,255:40,0 chr1 47399848 . C . PASS END=47399995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:36:0,84,1221:0,94,255:40,0 chr1 47399996 . C . PASS END=47399997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:34:0,78,1170:0,102,255:26,0 chr1 47399998 . G . PASS END=47400002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:27,0 chr1 47400003 . G . PASS END=47400021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,65,255:26,0 chr1 47400022 . A . PASS END=47400023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 47400024 . G . PASS END=47400024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 47400025 . C . PASS END=47400025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 47400026 . T . PASS END=47400026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:19,0 chr1 47400027 . C . PASS END=47400038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,784:0,62,255:21,0 chr1 47400125 . T . PASS END=47400233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,117,1755:0,147,255:40,0 chr1 47400671 . C . PASS END=47400823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:31:0,93,1127:0,93,255:40,0 chr1 47400824 . T . PASS END=47400824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr1 47400825 . T . PASS END=47400826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1132:0,93,255:31,0 chr1 47401195 . C . PASS END=47401197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 47401198 . T . PASS END=47401198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 47401199 . C . PASS END=47401201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 47401202 . C . PASS END=47401263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1203:0,83,255:35,0 chr1 47401264 . A . PASS END=47401264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr1 47401265 . C . PASS END=47401295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:34,0 chr1 47401296 . G . PASS END=47401319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,883:0,64,255:26,0 chr1 47402336 . C . PASS END=47402440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:83:33:0,83,1202:0,83,255:40,0 chr1 47402441 . A . PASS END=47402463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:55:0,90,1350:0,135,255:40,0 chr1 47402974 . C . PASS END=47403018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:48:0,120,1800:0,121,255:40,0 chr1 47403668 . C . PASS END=47403809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,110,1541:0,110,255:40,0 chr1 47406911 . C . PASS END=47406919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 47406920 . G . PASS END=47406920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 47406921 . T . PASS END=47406932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 47406933 . C . PASS END=47406933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 47406934 . A . PASS END=47406951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,930:0,62,255:26,0 chr1 47406952 . G . PASS END=47406963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 47406964 . G . PASS END=47406966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1055:0,74,255:27,0 chr1 47406967 . C . PASS END=47406972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 47406973 . G . PASS END=47406975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 47406976 . G . PASS END=47406984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 47406985 . T . PASS END=47407015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,889:0,61,255:26,0 chr1 47407016 . C . PASS END=47407017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 47407018 . G . PASS END=47407018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 47407019 . C . PASS END=47407027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr1 47407028 . A . PASS END=47407045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr1 47407046 . T . PASS END=47407046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr1 47407047 . T . PASS END=47407059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 47407060 . A . PASS END=47407060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 47407061 . G . PASS END=47407064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 47407065 . T . PASS END=47407065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:21,0 chr1 47407066 . C . PASS END=47407066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 47407067 . A . PASS END=47407067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 47407068 . C . PASS END=47407070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 47407071 . A . PASS END=47407072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 47407073 . G . PASS END=47407073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 47407074 . A . PASS END=47407091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr1 47407092 . A . PASS END=47407103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:16:0,30,450:0,41,255:13,0 chr1 47407104 . A . PASS END=47407104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 47407105 . T . PASS END=47407105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 47427255 . A . PASS END=47427277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,737:0,60,255:26,0 chr1 47427278 . C . PASS END=47427393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:29:0,81,1164:0,83,255:40,0 chr1 47427394 . C . PASS END=47427394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:29,0 chr1 47427395 . C . PASS END=47427396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:35:0,96,1440:0,105,255:32,0 chr1 47427397 . T . PASS END=47427397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 47427398 . A . PASS END=47427407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,85,255:32,0 chr1 47427408 . A . PASS END=47427411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:32:0,78,1170:0,82,255:26,0 chr1 47427412 . C . PASS END=47427413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 47427414 . T . PASS END=47427428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 47489490 . A . PASS END=47489491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 47489492 . G . PASS END=47489492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 47489493 . G . PASS END=47489516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:13,0 chr1 47489517 . T . PASS END=47489517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 47489518 . G . PASS END=47489558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 47489559 . C . PASS END=47489559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 47489560 . T . PASS END=47489581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr1 47489582 . G . PASS END=47489637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,831:0,63,255:25,0 chr1 47489638 . C . PASS END=47489666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 47495662 . T . PASS END=47495784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:37:0,96,1414:0,110,255:40,0 chr1 47495785 . A . PASS END=47495787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,94,255:31,0 chr1 47495788 . C . PASS END=47495788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:30,0 chr1 47495789 . T . PASS END=47495795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:31,0 chr1 47495796 . C . PASS END=47495800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1125:0,60,255:25,0 chr1 47495801 . C . PASS END=47495803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:30:0,51,765:0,90,255:17,0 chr1 47497108 . A . PASS END=47497152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,212,255:40,0 chr1 47498913 . G . PASS END=47498917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47498918 . G . PASS END=47498918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 47498919 . G . PASS END=47498923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 47498924 . G . PASS END=47498926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 47498927 . G . PASS END=47499040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:39:0,90,1396:0,90,255:40,0 chr1 47501478 . G . PASS END=47501495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,971:0,84,255:31,0 chr1 47501496 . T . PASS END=47501496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 47501497 . G . PASS END=47501605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:31:0,80,1141:0,80,255:40,0 chr1 47501689 . C . PASS END=47501843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:38:0,96,1440:0,101,255:40,0 chr1 47504332 . A . PASS END=47504438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:97:38:0,97,1311:0,97,255:40,0 chr1 47505014 . G . PASS END=47505030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr1 47505031 . C . PASS END=47505050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,670:0,60,255:25,0 chr1 47505051 . A . PASS END=47505153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1124:0,80,255:36,0 chr1 47505154 . A . PASS END=47505169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,74,255:26,0 chr1 47505170 . A . PASS END=47505189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:17:0,45,675:0,51,255:18,0 chr1 47505190 . G . PASS END=47505204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,35,255:13,0 chr1 47512139 . G . PASS END=47512139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 47512140 . G . PASS END=47512140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 47512141 . A . PASS END=47512141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 47512142 . C . PASS END=47512143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 47512144 . A . PASS END=47512144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 47512145 . G . PASS END=47512150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 47512151 . T . PASS END=47512151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 47512152 . G . PASS END=47512272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:34:0,86,1128:0,86,255:40,0 chr1 47514237 . G . PASS END=47514301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:54:0,120,1800:0,129,255:40,0 chr1 47515094 . G . PASS END=47515176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,117,1755:0,143,255:40,0 chr1 47515672 . G . PASS END=47515690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1088:0,86,255:37,0 chr1 47515691 . T . PASS END=47515691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1069:0,55,255:35,0 chr1 47515692 . T . PASS END=47515833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:35:0,88,1181:0,88,255:40,0 chr1 47515834 . C . PASS END=47515834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:30,0 chr1 47515835 . T . PASS END=47515846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr1 47533163 . A . PASS END=47533165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 47533166 . G . PASS END=47533180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 47533181 . C . PASS END=47533181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 47533182 . A . PASS END=47533187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1133:0,84,255:30,0 chr1 47533188 . T . PASS END=47533188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 47533189 . C . PASS END=47533325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:30:0,85,1117:0,85,255:40,0 chr1 47533326 . A . PASS END=47533326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:27,0 chr1 47533327 . T . PASS END=47533333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 47533334 . A . PASS END=47533339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1031:0,71,255:25,0 chr1 47534294 . T . PASS END=47534435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:34:0,102,1250:0,102,255:40,0 chr1 47546295 . A . LowDepth;LowGQ END=47546339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 47548006 . G . PASS END=47548133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:37:0,81,1343:0,81,255:40,0 chr1 47550292 . A . PASS END=47550292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 47550293 . A . PASS END=47550416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,953:0,80,255:40,0 chr1 47550496 . T . PASS END=47550500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,729:0,47,255:19,0 chr1 47550501 . T . PASS END=47550501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 47550502 . G . PASS END=47550522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,50,255:19,0 chr1 47550523 . G . PASS END=47550523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 47550524 . T . PASS END=47550529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 47550530 . C . PASS END=47550540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,540:0,34,255:13,0 chr1 47550541 . C . PASS END=47550545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 47550546 . A . PASS END=47550547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 47550548 . C . PASS END=47550548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:12,0 chr1 47550549 . A . PASS END=47550575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,407:0,39,255:13,0 chr1 47550576 . A . PASS END=47550602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,505:0,45,255:17,0 chr1 47550603 . A . PASS END=47550603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 47550604 . A . PASS END=47550633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:18,0 chr1 47550634 . A . PASS END=47550634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:16,0 chr1 47550635 . C . PASS END=47550643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 47550644 . T . PASS END=47550644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,391:0,31,255:14,0 chr1 47550645 . T . PASS END=47550646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 47550647 . A . PASS END=47550650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 47560238 . A . PASS END=47560341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:33:0,84,1260:0,95,255:40,0 chr1 47564766 . A . PASS END=47564931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,94,255:40,0 chr1 47564932 . T . PASS END=47564942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 47564943 . T . PASS END=47564950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:18,0 chr1 47564951 . T . PASS END=47564956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:18:0,39,585:0,54,255:13,0 chr1 47571800 . G . PASS END=47571860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:38:0,96,1494:0,96,255:40,0 chr1 47571861 . G . PASS END=47571901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:54:0,95,1656:0,95,255:40,1 chr1 47571902 . C T, 44.65 PASS DP=53;MQ=108.46;MQRankSum=-5.745;ReadPosRankSum=2.100;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:29,24,0:0.453,0.000:53:16,12,0:13,12,0:43:79,0,47,179,179,179:255,0,255:17,0:4.4647e+01,1.9544e-04,4.9700e+01,1.7942e+02,2.1419e+02,1.8243e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,20,11,13:20,9,13,11:47571902 chr1 47571903 . A . PASS END=47571904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,102,1530:0,140,255:36,0 chr1 47571905 . C T, 44.65 PASS DP=49;MQ=108.97;MQRankSum=-5.598;ReadPosRankSum=2.302;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:27,22,0:0.449,0.000:49:14,12,0:13,10,0:43:79,0,47,179,179,179:255,0,255:19,0:4.4647e+01,1.9544e-04,4.9700e+01,1.7942e+02,2.1419e+02,1.8243e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,20,10,12:18,9,12,10:47571902 chr1 47571906 . T . PASS END=47571916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:47:0,90,1350:0,95,255:33,0 chr1 47571917 . A . PASS END=47571922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:60:47:0,60,900:0,108,255:23,0 chr1 47571923 . C . PASS END=47571928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:42:46:0,42,630:0,105,255:19,0 chr1 47571929 . T . PASS END=47571932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:30:36:0,30,450:0,62,255:11,0 chr1 47571933 . G . PASS END=47571933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:27:36:0,27,405:0,91,255:8,0 chr1 47581201 . G . PASS END=47581265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,106,1596:0,106,255:40,0 chr1 47582322 . G . PASS END=47582329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:71:0,120,1800:0,209,255:40,0 chr1 47582330 . C . PASS END=47582404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,140,255:40,0 chr1 47583438 . G . PASS END=47583438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 47583439 . A . PASS END=47583442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 47583443 . G . PASS END=47583444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 47583445 . A . PASS END=47583446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 47583447 . T . PASS END=47583447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 47583448 . G . PASS END=47583452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 47583453 . G . PASS END=47583454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 47583455 . A . PASS END=47583455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 47583456 . T . PASS END=47583470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,970:0,75,255:26,0 chr1 47583471 . G . PASS END=47583471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 47583472 . T . PASS END=47583472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 47583473 . G . PASS END=47583606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1111:0,83,255:40,0 chr1 47603158 . A . PASS END=47603164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr1 47603165 . T . PASS END=47603180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:25,0 chr1 47603181 . C . PASS END=47603181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 47603182 . A . PASS END=47603182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 47603183 . G . PASS END=47603187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr1 47603188 . C . PASS END=47603195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 47603196 . T . PASS END=47603216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 47603217 . A . PASS END=47603217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 47603218 . G . PASS END=47603222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:25,0 chr1 47603223 . C . PASS END=47603223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 47603224 . T . PASS END=47603293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 47603294 . A . PASS END=47603297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,731:0,52,255:19,0 chr1 47603298 . C . PASS END=47603298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 47603299 . C . PASS END=47603315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 47603316 . C . PASS END=47603316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 47603317 . C . PASS END=47603341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 47603342 . A . PASS END=47603352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr1 47606452 . T . PASS END=47606584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,99,1485:0,124,255:40,0 chr1 47606585 . G . PASS END=47606586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 47606587 . A . PASS END=47606593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:42:0,81,1215:0,112,255:31,0 chr1 47607243 . A . PASS END=47607243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 47607244 . C . PASS END=47607272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,988:0,84,255:28,0 chr1 47607273 . T . PASS END=47607273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 47607274 . G . PASS END=47607278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 47607279 . C . PASS END=47607280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 47607281 . C T, 48.25 PASS DP=29;MQ=142.12;MQRankSum=-3.235;ReadPosRankSum=2.959;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,19,0:0.655,0.000:29:5,10,0:5,9,0:44:83,0,44,651,358,1008:255,0,255:10,0:4.8250e+01,1.5584e-04,4.6797e+01,4.5000e+02,3.9242e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,3,16:5,5,12,7 chr1 47607282 . G . PASS END=47607285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 47607286 . T . PASS END=47607287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 47607780 . G . PASS END=47607784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1382:0,111,255:37,0 chr1 47607785 . G A, 46.85 PASS DP=37;MQ=152.05;MQRankSum=-0.943;ReadPosRankSum=-0.201;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,15,0:0.405,0.000:37:8,9,0:14,6,0:46:82,0,50,479,750,1229:255,0,255:22,0:4.6852e+01,1.1131e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,6,11,4:10,12,7,8 chr1 47607786 . G . PASS END=47607850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,115,1459:0,115,255:40,0 chr1 47607851 . A T, 218.55 PASS DP=57;MQ=104.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,27,0:0,30,0:169:256,172,0,2194,172,2194:255,171,0:0,0:2.1855e+02,1.6855e+02,0.0000e+00,4.5000e+02,2.0332e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,30:0,0,29,28 chr1 47607852 . A . PASS END=47607888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,120,1800:0,123,255:40,0 chr1 47607889 . C . PASS END=47607907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,100,1644:0,100,255:40,0 chr1 47608941 . G . PASS END=47608944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 47608945 . A . PASS END=47608945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 47608946 . A . PASS END=47608968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,963:0,72,255:26,0 chr1 47608969 . A . PASS END=47608969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 47608970 . T . PASS END=47608971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 47608972 . C . PASS END=47608982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 47608983 . G T, 38.32 PASS DP=29;MQ=34.38;MQRankSum=0.988;ReadPosRankSum=3.669;FractionInformativeReads=0.966;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,11,0:0.393,0.000:28:7,5,0:10,6,0:35:73,0,34,396,607,1007:255,0,255:17,0:3.8315e+01,1.4426e-03,3.7335e+01,3.9598e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,3,8:11,6,5,6 chr1 47608984 . T . PASS END=47609020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1040:0,83,255:33,0 chr1 47609021 . C . PASS END=47609047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1157:0,93,255:31,0 chr1 47609048 . C . PASS END=47609050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:25,0 chr1 47609051 . C . PASS END=47609052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 47609053 . T . PASS END=47609065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:24,0 chr1 47609434 . G . PASS END=47609488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:40:0,104,1377:0,104,255:40,0 chr1 47609489 . T C, 46.87 PASS DP=64;MQ=158.90;MQRankSum=-4.201;ReadPosRankSum=1.849;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,27,0:0.422,0.000:64:20,9,0:17,18,0:46:82,0,50,965,1313,2278:255,0,255:36,0:4.6868e+01,1.1105e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,21,17,10:17,20,11,16 chr1 47609490 . G . PASS END=47609526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,169,255:40,0 chr1 47609527 . C . PASS END=47609589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:64:0,120,1800:0,192,255:40,0 chr1 47610027 . A . PASS END=47610135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,173,255:40,0 chr1 47610222 . A . PASS END=47610398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,128,255:40,0 chr1 47610399 . G . PASS END=47610412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,123,255:40,0 chr1 47610457 . G . PASS END=47610473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:52:0,120,1800:0,135,255:40,0 chr1 47610474 . A . PASS END=47610642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,111,1559:0,113,255:40,2 chr1 47611538 . G . PASS END=47611560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:74:0,120,1800:0,181,255:40,0 chr1 47611561 . T . PASS END=47611597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,166,255:40,0 chr1 47611598 . T C, 47.25 PASS DP=76;MQ=111.39;MQRankSum=-3.335;ReadPosRankSum=3.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,41,0:0.539,0.000:76:17,23,0:18,18,0:46:82,0,48,1442,1207,2648:255,0,255:27,0:4.7250e+01,1.1649e-04,5.0975e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,20,20,21:17,18,20,21 chr1 47611599 . A . PASS END=47611602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,209,255:40,0 chr1 47611749 . G . PASS END=47611829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:82:0,120,1800:0,157,255:40,0 chr1 47614274 . G . PASS END=47614305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:25,0 chr1 47614306 . A . PASS END=47614308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:29,0 chr1 47614309 . T . PASS END=47614309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 47614310 . G . PASS END=47614314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1092:0,87,255:29,0 chr1 47614315 . T . PASS END=47614315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 47614316 . G . PASS END=47614458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:30:0,84,1088:0,90,255:40,0 chr1 47614459 . A . PASS END=47614459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 47614460 . C . PASS END=47614460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 47614461 . C . PASS END=47614469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:26,0 chr1 47649643 . T . PASS END=47649715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:36:0,96,1440:0,96,255:40,0 chr1 47650674 . C . PASS END=47650769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:55:0,120,1800:0,138,255:40,0 chr1 47652991 . G . PASS END=47653094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1302:0,89,255:40,0 chr1 47653095 . C . PASS END=47653095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1182:0,56,255:32,0 chr1 47653096 . A . PASS END=47653099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:33,0 chr1 47655538 . C . PASS END=47655544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 47655545 . A . PASS END=47655545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 47655546 . C . PASS END=47655569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr1 47655570 . A . PASS END=47655572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 47655573 . A . PASS END=47655573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 47655574 . G . PASS END=47655577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 47655578 . C . PASS END=47655604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,720:0,47,255:19,0 chr1 47685392 . T . PASS END=47685398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:18,0 chr1 47685399 . G . PASS END=47685406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 47685407 . T . PASS END=47685407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 47685408 . C . PASS END=47685417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 47685418 . C . PASS END=47685437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 47685438 . A . PASS END=47685438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 47685439 . G . PASS END=47685448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 47685449 . C . PASS END=47685454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 47685455 . T C, 113.21 PASS DP=22;MQ=249.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,11,0:0,11,0:63:151,66,0,843,66,843:255,66,0:0,0:1.1321e+02,6.3210e+01,2.0709e-06,4.5000e+02,9.7980e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,12:0,0,9,13 chr1 47685456 . T . PASS END=47685458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 47685459 . G . PASS END=47685468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,807:0,66,255:22,0 chr1 47685469 . C . PASS END=47685469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 47685470 . C . PASS END=47685471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 47685472 . C . PASS END=47685473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 47685474 . G . PASS END=47685486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,878:0,61,255:23,0 chr1 47685487 . G . PASS END=47685487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 47685488 . G . PASS END=47685492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 47685493 . C . PASS END=47685497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:19,0 chr1 47685498 . C . PASS END=47685498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr1 47685499 . C . PASS END=47685501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 47685502 . C . PASS END=47685502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 47685503 . C . PASS END=47685505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 47685506 . G . PASS END=47685506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 47685507 . G . PASS END=47685529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:24,0 chr1 47685530 . G . PASS END=47685548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,856:0,72,255:24,0 chr1 47685549 . A . PASS END=47685549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 47685550 . G . PASS END=47685556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,1 chr1 47685557 . T . PASS END=47685560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:43:26:0,43,874:0,43,255:22,1 chr1 47685561 . G . PASS END=47685562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 47685563 . C . PASS END=47685563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 47685564 . G . PASS END=47685566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 47685567 . C . PASS END=47685569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,58,255:19,1 chr1 47685570 . C . PASS END=47685570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,761:0,25,255:17,0 chr1 47685571 . C . PASS END=47685574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,53,255:18,0 chr1 47685575 . T . PASS END=47685575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,590:0,19,255:16,0 chr1 47685576 . C . PASS END=47685580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:16,0 chr1 47685581 . A . LowGQ END=47685581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,571:14,0,255:12,0 chr1 47685582 . C . PASS END=47685583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr1 47685584 . T . LowGQ END=47685584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,7:23:0:23:0,0,446:83,0,255:12,0 chr1 47685585 . C . PASS END=47685586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 47685587 . A . LowGQ END=47685587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,545:23,0,255:12,0 chr1 47685588 . C . PASS END=47685592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:17:0,36,540:0,51,255:12,0 chr1 47685593 . A . LowGQ END=47685593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,5:17:0:17:0,0,308:76,0,255:11,0 chr1 47685594 . C . PASS END=47685595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:12,0 chr1 47685596 . A . LowGQ END=47685597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,393:15,0,255:11,0 chr1 47685598 . C . PASS END=47685601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:10,0 chr1 47685602 . C . PASS END=47685602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 47685603 . A . LowGQ END=47685603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,318:77,0,255:8,0 chr1 47685604 . C . PASS END=47685605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr1 47685606 . A . LowGQ END=47685606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,349:60,0,255:9,0 chr1 47685607 . C . PASS END=47685607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr1 47685608 . A . LowGQ END=47685610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:15:0,0,230:2,0,255:9,0 chr1 47685611 . G . PASS END=47685611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 47685612 . T . LowGQ END=47685612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,404:35,0,255:11,0 chr1 47685613 . C . PASS END=47685614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:16:0,33,495:0,34,255:11,0 chr1 47685615 . T . LowGQ END=47685615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,322:21,0,255:11,0 chr1 47685616 . T . PASS END=47685616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,396:0,12,255:9,0 chr1 47685617 . G . LowGQ END=47685618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,349:17,0,255:10,0 chr1 47685619 . C . PASS END=47685619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:10,0 chr1 47685620 . A . LowGQ END=47685622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,5:15:0:15:0,0,305:21,0,255:10,0 chr1 47685623 . C . PASS END=47685623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 47685624 . T . LowGQ END=47685624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,338:21,0,255:10,0 chr1 47685625 . T . PASS END=47685625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 47685626 . G . LowGQ END=47685626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,398:17,0,255:12,0 chr1 47685627 . G . PASS END=47685627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 47685628 . C . PASS END=47685628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:12,0 chr1 47685629 . C . PASS END=47685630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 47685631 . G . LowGQ END=47685631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,396:10,0,255:12,0 chr1 47685632 . C . PASS END=47685632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 47685633 . T . LowGQ END=47685633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,361:21,0,255:11,0 chr1 47685634 . G . PASS END=47685634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 47685635 . G . PASS END=47685635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:12,0 chr1 47685636 . G . LowGQ END=47685639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,393:0,0,255:12,0 chr1 47685640 . C . PASS END=47685641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 47685642 . T . LowGQ END=47685642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:5,0,255:11,0 chr1 47685643 . C . PASS END=47685644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 47685645 . T . LowGQ END=47685645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,432:2,0,255:11,0 chr1 47685646 . C . PASS END=47685647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,495:0,31,255:11,0 chr1 47685648 . T . LowGQ END=47685648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,410:24,0,255:11,0 chr1 47685649 . C . PASS END=47685650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,495:0,32,255:11,0 chr1 47685651 . T . LowGQ END=47685652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,393:10,0,255:11,0 chr1 47685653 . G . PASS END=47685653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:11,0 chr1 47685654 . T . LowGQ END=47685655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,365:13,0,255:10,0 chr1 47685656 . A . PASS END=47685656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 47685657 . T . PASS END=47685657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 47685658 . T . PASS END=47685662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 47685663 . A . PASS END=47685663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:11,0 chr1 47685664 . G . PASS END=47685664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 47685665 . C . PASS END=47685665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 47685666 . T . LowGQ END=47685668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,371:0,0,255:12,0 chr1 47685669 . G . PASS END=47685670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 47685671 . C . PASS END=47685671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:11,0 chr1 47685672 . A . PASS END=47685672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:11,0 chr1 47685673 . A . PASS END=47685673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 47685674 . G . PASS END=47685675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:11,0 chr1 47685676 . A . PASS END=47685680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,540:0,31,255:14,0 chr1 47685681 . A . PASS END=47685682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 47685683 . A . PASS END=47685683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,486:0,15,255:13,0 chr1 47685684 . T . PASS END=47685686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:16:0,40,576:0,40,255:17,0 chr1 47685687 . T . LowGQ END=47685687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,526:15,0,255:16,0 chr1 47685688 . T . PASS END=47685689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,0 chr1 47685690 . A . PASS END=47685740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,653:0,41,255:19,0 chr1 47685741 . G . PASS END=47685743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 47685744 . G . PASS END=47685776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,706:0,54,255:19,0 chr1 47685777 . T . PASS END=47685778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 47685779 . C . PASS END=47685779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 47685780 . A . PASS END=47685781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 47685782 . A . PASS END=47685782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 47685783 . T . PASS END=47685815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 47685816 . A . PASS END=47685834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 47685835 . T . PASS END=47685846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 47689676 . C . PASS END=47689764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:86:33:0,86,1241:0,86,255:40,0 chr1 47689765 . A . PASS END=47689767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1131:0,77,255:26,0 chr1 47689768 . C . PASS END=47689768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 47689769 . C . PASS END=47689770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,1108:0,63,255:26,0 chr1 47691115 . C . PASS END=47691115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 47691116 . T . PASS END=47691116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 47691117 . G . PASS END=47691130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,299:0,30,255:12,0 chr1 47691131 . G . PASS END=47691131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 47691132 . C . PASS END=47691136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 47691137 . G . PASS END=47691138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 47691139 . C . PASS END=47691139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 47691140 . T . PASS END=47691143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 47691144 . G . PASS END=47691144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 47691145 . C . PASS END=47691149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 47691150 . G . PASS END=47691150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:17,0 chr1 47691151 . A . PASS END=47691154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 47691155 . G . PASS END=47691155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 47691156 . C . PASS END=47691156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 47691157 . G . PASS END=47691157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 47691158 . C . PASS END=47691159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 47691160 . C . PASS END=47691160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 47691161 . G . PASS END=47691162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 47691163 . C . PASS END=47691163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 47691164 . C . PASS END=47691166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 47691167 . G . PASS END=47691167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 47691168 . G . PASS END=47691177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 47691178 . G . PASS END=47691178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 47691179 . C . PASS END=47691184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 47691185 . G . PASS END=47691193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 47691194 . G . PASS END=47691208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:18,0 chr1 47691209 . T . PASS END=47691209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,560:0,23,255:15,0 chr1 47691210 . G . PASS END=47691216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 47691217 . T . PASS END=47691240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:12:0,31,465:0,31,255:13,0 chr1 47691241 . G . PASS END=47691241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 47691242 . A . PASS END=47691271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 47691272 . G . PASS END=47691273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:18:12:0,18,270:0,19,255:6,0 chr1 47691274 . G . PASS END=47691279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:8,0 chr1 47691280 . C . PASS END=47691293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:6,0 chr1 47691294 . G . PASS END=47691294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:4,0 chr1 47691295 . G . PASS END=47691326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr1 47691327 . G . PASS END=47691332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 47691333 . G . PASS END=47691333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 47691334 . C . PASS END=47691338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 47691339 . T . PASS END=47691339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 47691340 . A . PASS END=47691344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:8,0 chr1 47691345 . T . PASS END=47691345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 47691346 . C . PASS END=47691361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,1 chr1 47691362 . C . PASS END=47691373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:11,0 chr1 47691374 . C . PASS END=47691386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 47691387 . T . PASS END=47691387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 47691388 . C . PASS END=47691398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 47691399 . C . PASS END=47691401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 47691402 . T . PASS END=47691402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 47691403 . T . PASS END=47691410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 47691411 . T . PASS END=47691421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 47691422 . C . PASS END=47691429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 47691430 . G . PASS END=47691434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 47691435 . G . PASS END=47691453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,398:0,33,255:12,0 chr1 47691454 . C . PASS END=47691457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 47691458 . T . PASS END=47691458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 47691459 . C . PASS END=47691474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 47691475 . G . PASS END=47691478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 47691479 . G . PASS END=47691483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 47691484 . A . PASS END=47691484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 47691485 . T . PASS END=47691505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 47691506 . G . PASS END=47691507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 47691508 . C . PASS END=47691509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 47691510 . C . PASS END=47691510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 47691511 . T . PASS END=47691511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 47691512 . C . PASS END=47691516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:10,0 chr1 47691517 . T . PASS END=47691518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 47691519 . G . PASS END=47691522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:8,0 chr1 47691523 . T . PASS END=47691525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:18:12:0,18,270:0,19,255:6,0 chr1 47691526 . C . LowGQ END=47691526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:5,0 chr1 47691527 . T . PASS END=47691537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:10:0,12,180:0,14,255:6,0 chr1 47691538 . T . LowGQ END=47691538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,202:3,0,206:3,0 chr1 47691539 . C . PASS END=47691547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,13,255:4,0 chr1 47691548 . G . LowGQ END=47691560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,45:0,0,242:3,0 chr1 47694136 . T . PASS END=47694166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,134,255:40,0 chr1 47694167 . A G, 203.51 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,29,0:0,23,0:154:241,157,0,2016,157,2016:255,156,0:0,0:2.0351e+02,1.5351e+02,0.0000e+00,4.5000e+02,1.8828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,26:0,0,25,27 chr1 47694168 . G . PASS END=47694194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,142,255:40,0 chr1 47694868 . C . PASS END=47694869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 47694870 . G . PASS END=47694871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 47694872 . G . PASS END=47694874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 47694875 . A . PASS END=47694875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 47694876 . T . PASS END=47694876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 47694877 . A . PASS END=47694877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1382:0,68,255:39,0 chr1 47694878 . T . PASS END=47695023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:38:0,93,1395:0,96,255:40,0 chr1 47697058 . C . PASS END=47697058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 47697059 . T . PASS END=47697059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:15,0 chr1 47697060 . C . PASS END=47697067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,601:0,54,255:19,0 chr1 47697068 . C . PASS END=47697071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 47697072 . G . PASS END=47697072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 47697073 . G . PASS END=47697077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 47697078 . C . PASS END=47697081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:32,0 chr1 47697082 . C . PASS END=47697082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:30,0 chr1 47697083 . A . PASS END=47697089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:35,0 chr1 47697090 . T . PASS END=47697090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1127:0,58,255:33,0 chr1 47697091 . C . PASS END=47697091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1274:0,105,255:35,0 chr1 47697092 . A . PASS END=47697092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:34,0 chr1 47697093 . G . PASS END=47697136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1250:0,81,255:40,0 chr1 47697137 . A . PASS END=47697137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1627:0,72,255:40,0 chr1 47697138 . A . PASS END=47697412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,112,1800:0,112,255:40,0 chr1 47715816 . T . PASS END=47715816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 47715830 . A . PASS END=47715830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 47715923 . G . PASS END=47715923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 47715925 . T . PASS END=47715925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 47716556 . T . PASS END=47716556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 47716605 . G . PASS END=47716605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr1 47716806 . G . PASS END=47716806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 47716808 . T . PASS END=47717151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:40:0,88,1308:0,88,255:40,0 chr1 47717152 . C . PASS END=47717188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:42:0,85,1446:0,85,255:40,0 chr1 47717189 . A G, 48.60 PASS DP=44;MQ=250.00;MQRankSum=5.615;ReadPosRankSum=2.275;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,19,0:0.432,0.000:44:14,5,0:11,14,0:47:83,0,50,680,829,1508:255,0,255:22,0:4.8604e+01,8.1542e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,14,11,8:14,11,11,8 chr1 47717190 . G . PASS END=47717226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,113,1800:0,113,255:40,0 chr1 47717227 . T . PASS END=47717594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:34:0,87,1263:0,89,255:40,0 chr1 47725961 . C . PASS END=47725962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 47725963 . G . PASS END=47725963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 47725964 . G . PASS END=47725967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 47725968 . G . PASS END=47725968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 47725969 . A . PASS END=47725969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 47725970 . T . PASS END=47725975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:30,0 chr1 47725976 . T . PASS END=47725976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 47725977 . T . PASS END=47725977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 47725978 . A . PASS END=47725978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 47725979 . T . PASS END=47725979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,994:0,43,255:28,0 chr1 47725980 . G . PASS END=47726006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1119:0,83,255:39,0 chr1 47726007 . A . PASS END=47726007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1299:0,75,255:38,0 chr1 47726008 . A . PASS END=47726049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,120,1800:0,126,255:40,0 chr1 47726050 . A . PASS END=47726086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,149,255:40,0 chr1 47726087 . T C, 50.00 PASS DP=66;MQ=250.00;MQRankSum=6.925;ReadPosRankSum=3.592;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,37,0:0.561,0.000:66:15,21,0:14,16,0:48:85,0,49,1315,1013,2329:255,0,255:29,0:5.0000e+01,7.2740e-05,5.1719e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,22,15:17,12,18,19 chr1 47726088 . G . PASS END=47726124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,179,255:40,0 chr1 47726125 . G . PASS END=47726211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:34:0,86,1210:0,86,255:40,0 chr1 47726213 . T . PASS END=47726213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 47728574 . C . PASS END=47728757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:37:0,96,1440:0,111,255:40,0 chr1 47728758 . A . PASS END=47728758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:31,0 chr1 47728759 . G . PASS END=47728775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,962:0,85,255:32,0 chr1 47728776 . T . PASS END=47728778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:25,0 chr1 47728779 . A . PASS END=47728780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 47728781 . A . PASS END=47728786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:26,0 chr1 47728787 . T . PASS END=47728787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,862:0,51,255:23,0 chr1 47728788 . G . PASS END=47728788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 47732473 . T . PASS END=47732482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:104:0,120,1800:0,255,255:40,0 chr1 47735307 . T . PASS END=47735317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,120,1800:0,129,255:40,0 chr1 47735318 . A . PASS END=47735533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:37:0,81,1215:0,95,255:40,0 chr1 47735534 . A . PASS END=47735538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:37:0,78,1170:0,111,255:26,0 chr1 47737748 . C . PASS END=47737752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:20:8:0,20,288:0,20,255:11,0 chr1 47737753 . C . PASS END=47737762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:12,0 chr1 47737763 . T . PASS END=47737782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,562:0,45,255:18,0 chr1 47737783 . T . PASS END=47737783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 47737784 . G . PASS END=47737791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:18,0 chr1 47737792 . G . PASS END=47737816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:23,0 chr1 47737817 . C . PASS END=47737817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 47737818 . C . PASS END=47737822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,756:0,69,255:23,0 chr1 47737823 . C . PASS END=47737823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 47737824 . C . PASS END=47737835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,734:0,69,255:24,0 chr1 47737836 . A . PASS END=47737836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 47737837 . G . PASS END=47737862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:23,0 chr1 47737863 . T . PASS END=47737863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 47737864 . G . PASS END=47737864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 47737865 . T . PASS END=47737865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 47737866 . C . PASS END=47737881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 47737882 . A . PASS END=47737882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr1 47737883 . T . PASS END=47737889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 47737890 . C . PASS END=47737911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 47737912 . A . PASS END=47737912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 47737913 . T . PASS END=47737913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 47745913 . C . PASS END=47745915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 47745916 . T . PASS END=47745916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 47745917 . G . PASS END=47745920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 47745921 . G . PASS END=47746868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:28:0,84,1055:0,84,255:40,0 chr1 47746869 . G . PASS END=47746869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:28,0 chr1 47746870 . G . PASS END=47746881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1156:0,83,255:31,0 chr1 47748017 . C . PASS END=47748131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,111,1559:0,111,255:40,0 chr1 47753223 . C . PASS END=47753332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:85:34:0,85,1166:0,85,255:40,0 chr1 47753336 . A . PASS END=47753336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1241:0,86,255:31,0 chr1 47755107 . T . PASS END=47755257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:86:34:0,86,1255:0,86,255:40,0 chr1 47755260 . G . PASS END=47755260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1099:0,77,255:27,0 chr1 47755263 . C . PASS END=47755263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 47759130 . C . PASS END=47759216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,114,1710:0,127,255:40,0 chr1 47761437 . A . PASS END=47761520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:73:0,120,1800:0,195,255:40,0 chr1 47765577 . C . PASS END=47765803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1072:0,85,255:40,0 chr1 47765804 . A . PASS END=47765811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,79,255:22,0 chr1 47765812 . G . PASS END=47765824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,52,255:17,0 chr1 47765834 . C . PASS END=47765834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 47767228 . C . PASS END=47767228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 47767233 . C . PASS END=47767250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr1 47767251 . G . PASS END=47767251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 47767252 . T . PASS END=47767252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 47767253 . C . PASS END=47767256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,120,1512:0,120,255:40,0 chr1 47767257 . T . PASS END=47767257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1457:0,76,255:39,0 chr1 47767258 . A . PASS END=47767266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,119,1629:0,119,255:40,0 chr1 47767267 . A . PASS END=47767267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1207:0,71,255:40,0 chr1 47767268 . C . PASS END=47767420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:36:0,99,1485:0,105,255:40,0 chr1 47767892 . T . PASS END=47767892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 47767906 . C . PASS END=47767913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,131,255:40,0 chr1 47767914 . G A, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.105;ReadPosRankSum=4.237;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,27,0:0.529,0.000:51:10,13,0:14,14,0:48:85,0,50,937,855,1792:255,0,255:24,0:5.0000e+01,6.6527e-05,5.2757e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,15,12:11,13,11,16 chr1 47767915 . C . PASS END=47767951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,142,255:40,0 chr1 47767952 . T . PASS END=47768018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1215:0,85,255:40,0 chr1 47770557 . A . PASS END=47770557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 47770561 . C . PASS END=47770668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:99:44:0,108,1598:0,108,255:40,0 chr1 47775948 . C . PASS END=47775991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,167,255:40,0 chr1 47779729 . G . PASS END=47779729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 47779752 . G . PASS END=47779752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 47779785 . G . PASS END=47779785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 47799618 . A . PASS END=47799621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 47799622 . T . PASS END=47799623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 47799624 . A . PASS END=47799627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 47799628 . G . LowGQ END=47799628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:3,0,255:8,0 chr1 47799629 . C . PASS END=47799629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 47799630 . T . PASS END=47799630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 47799631 . G . PASS END=47799633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 47799634 . G . LowGQ END=47799634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:9,0 chr1 47799635 . C . PASS END=47799636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 47799637 . G . LowGQ END=47799637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:9,0 chr1 47799638 . C . PASS END=47799638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 47799639 . G C, 50.00 PASS DP=11;MQ=247.46;MQRankSum=1.034;ReadPosRankSum=1.769;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,7,0:0.636,0.000:11:1,1,0:3,6,0:47:85,0,48,246,77,323:255,0,14:2,0:5.0000e+01,8.1542e-05,5.0572e+01,2.4582e+02,1.1225e+02,3.2631e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,5,2:1,3,3,4 chr1 47799640 . G . PASS END=47799650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 47799651 . G . PASS END=47799651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 47799652 . T . PASS END=47799655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 47799656 . G . PASS END=47799656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 47799657 . G . PASS END=47799662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 47799663 . A . PASS END=47799663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 47799664 . G . PASS END=47799664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 47799665 . C . PASS END=47799676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 47799677 . G . PASS END=47799684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr1 47799685 . G . PASS END=47799685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 47799686 . G . PASS END=47799690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 47799691 . T . PASS END=47799691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr1 47799692 . T . PASS END=47799696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 47799697 . T . PASS END=47799697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:18,0 chr1 47799698 . C . PASS END=47799698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 47799699 . T . PASS END=47799699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:19,0 chr1 47799700 . G . PASS END=47799702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 47799703 . C . PASS END=47799703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 47799704 . T . PASS END=47799729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,613:0,40,255:19,0 chr1 47799730 . T . PASS END=47799730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 47799731 . G . PASS END=47799732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 47799733 . T . PASS END=47799749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,466:0,31,255:13,0 chr1 47799750 . G . PASS END=47799750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 47799751 . G . PASS END=47799751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 47799752 . C . PASS END=47799752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 47799753 . G . PASS END=47799761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 47799762 . G . PASS END=47799762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:11,0 chr1 47799763 . G . PASS END=47799767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 47799768 . C . PASS END=47799768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 47799769 . A . PASS END=47799780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:12,0 chr1 47799781 . T . PASS END=47799788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 47800845 . A C, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.516;ReadPosRankSum=1.964;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,31,0:0.534,0.000:58:15,16,0:12,15,0:48:85,0,50,1072,958,2029:255,0,255:27,0:5.0000e+01,6.7045e-05,5.2626e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,18,18,13:13,14,15,16 chr1 47823970 . G . PASS END=47823975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:34,0 chr1 47833213 . A . PASS END=47833213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr1 47834141 . A . PASS END=47834282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:33:0,87,1305:0,90,255:40,0 chr1 47834283 . A . PASS END=47834287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:32:0,66,990:0,83,255:24,0 chr1 47838627 . G . PASS END=47838779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:95:42:0,95,1332:0,95,255:40,0 chr1 47840581 . A . PASS END=47840657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,115,1372:0,115,255:40,0 chr1 47840869 . A . PASS END=47840965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,122,255:40,0 chr1 47842376 . G . PASS END=47842393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,235,255:40,0 chr1 47842394 . C . PASS END=47842417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:83:0,120,1800:0,245,255:40,0 chr1 47842777 . C T, 49.84 PASS DP=65;MQ=210.22;MQRankSum=-1.386;ReadPosRankSum=5.694;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,31,0:0.477,0.000:65:16,15,0:18,16,0:48:85,0,50,1093,1179,2272:255,0,255:34,0:4.9836e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,16,15,16:14,20,11,20 chr1 47881988 . A . PASS END=47882003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 47882004 . A . PASS END=47882016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 47882017 . C . PASS END=47882027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 47882028 . C . PASS END=47882029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 47882030 . G . PASS END=47882034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 47882035 . C . PASS END=47882035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 47882036 . C . PASS END=47882041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr1 47882042 . C . PASS END=47882078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 47882079 . C . LowDepth;LowGQ END=47882180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 47882181 . G . PASS END=47882188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 47882189 . C . LowGQ END=47882189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,110:4,0 chr1 47882190 . A . PASS END=47882193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 47882194 . C . LowGQ END=47882194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 47882195 . G . PASS END=47882221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 47882222 . C . PASS END=47882240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,230:0,21,230:9,0 chr1 47882241 . C . PASS END=47882256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 47882257 . C . PASS END=47882257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 47882258 . C . PASS END=47882269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 47882270 . G . PASS END=47882339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 47882340 . G . LowGQ END=47882340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 47882341 . C . PASS END=47882359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 47882360 . C . PASS END=47882364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 47882365 . C . PASS END=47882434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 47882435 . G . PASS END=47882459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 47882460 . G . PASS END=47882471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 47882472 . G . PASS END=47882484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,125:3,0 chr1 47882485 . C . PASS END=47882488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 47882489 . A . PASS END=47882496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 47882497 . C T, 45.23 PASS DP=4;MQ=240.36;MQRankSum=0.727;ReadPosRankSum=0.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,3,0:0.750,0.000:4:1,0,0:0,3,0:30:80,0,27,99,36,135:74,0,27:1,0:4.5235e+01,4.7452e-03,2.9739e+01,9.9289e+01,7.0535e+01,1.3805e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,0,3:0,1,3,0 chr1 47882498 . G . PASS END=47882534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,108:3,0 chr1 47882535 . C . PASS END=47882620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 47882621 . C . PASS END=47882679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 47882680 . G . PASS END=47882702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 47882703 . G . PASS END=47882757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 47882758 . C . PASS END=47882759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 47882760 . C . PASS END=47882760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 47882761 . C . PASS END=47882766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr1 47882767 . A . PASS END=47882824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 47882825 . C . PASS END=47882825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 47882826 . C . PASS END=47882837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 47882838 . A . PASS END=47882885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 47882886 . G . PASS END=47882886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 47882887 . C . PASS END=47882914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,250:9,0 chr1 47882915 . G . PASS END=47882915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 47882916 . G . PASS END=47882923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 47882924 . T . PASS END=47882924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 47882925 . C . PASS END=47882930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 47882931 . T . PASS END=47882931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 47882932 . G . PASS END=47882937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 47882938 . C . PASS END=47882947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 47903808 . A . LowDepth;LowGQ END=47903810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 47903811 . A . LowGQ END=47903866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr1 47903867 . G . PASS END=47903878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 47903879 . C . LowGQ END=47903879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 47903880 . G . PASS END=47903882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 47903883 . G . PASS END=47903908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 47903909 . C . PASS END=47903944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 47903945 . C . PASS END=47903945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 47903946 . G . LowGQ END=47903948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,318:6,0,255:10,2 chr1 47903949 . C . PASS END=47903949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 47903950 . C . PASS END=47903957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 47903958 . G . PASS END=47903958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 47903959 . T . PASS END=47903959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 47903960 . G . PASS END=47903960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:8,0 chr1 47903961 . C . PASS END=47904021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 47904022 . A . PASS END=47904044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 47904045 . G . PASS END=47904071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,209:6,0 chr1 47904072 . G . LowGQ END=47904149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 47904150 . C . PASS END=47904174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 47904175 . G . PASS END=47904193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 47904194 . C . PASS END=47904209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 47904210 . C . PASS END=47904210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 47904211 . T . PASS END=47904211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 47904212 . C . PASS END=47904212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 47904213 . A . PASS END=47904213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 47904214 . T . PASS END=47904225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:18,0 chr1 47904226 . T . PASS END=47904226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 47904227 . C . PASS END=47904234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 47904235 . G . PASS END=47904259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,644:0,60,255:23,0 chr1 47904260 . C . PASS END=47904260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr1 47904261 . G . PASS END=47904317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,62,255:26,0 chr1 47904318 . T . PASS END=47904320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47904321 . C . PASS END=47904325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 47904326 . C . PASS END=47904327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 47904328 . G . PASS END=47904351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,817:0,61,255:26,0 chr1 47904352 . A . PASS END=47904352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 47904353 . C . PASS END=47904363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 47904364 . T . PASS END=47904364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:20,0 chr1 47904365 . C . PASS END=47904366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 47904367 . A . PASS END=47904368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 47904369 . A . PASS END=47904379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,931:0,75,255:25,0 chr1 47904380 . G . PASS END=47904385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 47904386 . C . PASS END=47904386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 47904387 . A . PASS END=47904387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 47904388 . A . PASS END=47904389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 47904390 . C . PASS END=47904401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,762:0,52,255:19,0 chr1 47904402 . A . PASS END=47904420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:12:0,33,495:0,36,255:13,0 chr1 47904421 . C . PASS END=47904421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 47904422 . G . PASS END=47904431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr1 47904432 . G . PASS END=47904432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 47904433 . A . PASS END=47904446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 47904447 . G . PASS END=47904454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 47904455 . C . PASS END=47904455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 47904456 . C . PASS END=47904456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 47904457 . T . LowGQ END=47904457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:7,0 chr1 47904458 . G . PASS END=47904465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,294:0,24,255:8,0 chr1 47904466 . G . PASS END=47904466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 47904467 . C . PASS END=47904468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 47904469 . A . LowGQ END=47904470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:0,0,247:7,0 chr1 47904471 . C . PASS END=47904477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 47904478 . A . PASS END=47904482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 47904483 . C . PASS END=47904483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:4,0 chr1 47904484 . A . PASS END=47904488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 47904489 . C . PASS END=47904499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 47904500 . G . LowGQ END=47904529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,0:4:0:2:0,0,0:0,0,33:3,0 chr1 47904530 . G . PASS END=47904533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 47904534 . C . LowGQ END=47904535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 47904536 . G . PASS END=47904550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 47904551 . G . PASS END=47904551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 47904552 . G . PASS END=47904552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 47904553 . C . PASS END=47904555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 47904556 . C . PASS END=47904567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 47904568 . G . PASS END=47904574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr1 47904575 . C . PASS END=47904575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 47904576 . C . PASS END=47904580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 47904581 . C . PASS END=47904581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 47904582 . G . PASS END=47904597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 47904598 . G . PASS END=47904598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 47904599 . C . PASS END=47904602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 47904603 . T . PASS END=47904603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 47904604 . A . PASS END=47904612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 47904613 . G . PASS END=47904613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 47904614 . C . PASS END=47904615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 47904616 . A . PASS END=47904616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 47904617 . C . PASS END=47904625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 47904626 . T . PASS END=47904635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:9,0 chr1 47904636 . T . LowGQ END=47904636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:7,0 chr1 47904637 . A . PASS END=47904641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 47904642 . G . PASS END=47904655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:12:11:0,12,180:0,33,255:6,0 chr1 47904656 . G . LowGQ END=47904667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:0:11:0,0,135:0,0,255:3,1 chr1 47904668 . T TCCGCAC, 79.90 PASS DP=13;MQ=244.78;FractionInformativeReads=0.846 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,3,0:0,8,0:30:105,33,0,373,33,373:252,0,111:0,13:7.9904e+01,2.9904e+01,4.4433e-03,3.8297e+02,6.4864e+01,3.8625e+02:0.00,22.00,25.00,34.77,56.77,37.77:0,0,4,7:0,0,8,3 chr1 47904669 . C . LowGQ END=47904669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,7:12:0:12:0,0,0:227,0,158:8,0 chr1 47904670 . C . PASS END=47904686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 47904687 . G . LowGQ END=47904687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,258:42,0,255:8,0 chr1 47904688 . C . PASS END=47904688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:7,0 chr1 47904689 . C . LowGQ END=47904691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,266:19,0,255:8,0 chr1 47904692 . C . PASS END=47904695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 47904696 . T . PASS END=47904697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 47904698 . C . PASS END=47904699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr1 47904700 . C . PASS END=47904704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 47904705 . G . PASS END=47904705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 47904706 . C . PASS END=47904706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 47904707 . A . PASS END=47904708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 47904709 . C . PASS END=47904711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 47904712 . C . PASS END=47904727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 47904728 . G . PASS END=47904732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 47904733 . C . PASS END=47904735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 47904736 . T . PASS END=47904774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 47904775 . C . LowGQ END=47904775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 47904776 . G . PASS END=47904783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 47904784 . C . PASS END=47904784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 47904785 . G . PASS END=47904790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,188:6,0 chr1 47904791 . C . LowGQ END=47904792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:0,0,212:5,0 chr1 47904793 . C . PASS END=47904796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 47904797 . C . PASS END=47904797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 47904798 . G . PASS END=47904798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr1 47904799 . C . PASS END=47904799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 47904800 . G . PASS END=47904800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 47904801 . G . LowGQ END=47904802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:0,0,176:4,0 chr1 47904803 . A . PASS END=47904806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 47904807 . G . PASS END=47904807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 47904808 . C . PASS END=47904817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,180:6,0 chr1 47904818 . T . PASS END=47904818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,139:0,1,139:4,0 chr1 47904819 . G . PASS END=47904822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 47904823 . C . LowGQ END=47904824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:5:0,0,116:0,0,118:4,0 chr1 47904825 . G . PASS END=47904827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 47904828 . T . LowGQ END=47904829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,83:2,0,101:4,0 chr1 47904830 . A . PASS END=47904833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:4,0 chr1 47904834 . T . LowGQ END=47904834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,2:5:0:5:0,0,75:18,0,93:2,0 chr1 47904835 . C . PASS END=47904837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 47904838 . G . PASS END=47904838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:3,0 chr1 47904839 . C . PASS END=47904841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:4,0 chr1 47904842 . G . LowGQ END=47904844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:5:0,0,72:0,0,74:4,0 chr1 47904845 . C . PASS END=47904847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,180:5,0 chr1 47904848 . G . LowGQ END=47904848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,114:15,0,129:4,0 chr1 47904849 . G . PASS END=47904850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,1 chr1 47904851 . C . LowGQ END=47904851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:15,0,137:4,0 chr1 47904852 . C . PASS END=47904852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 47904853 . C . PASS END=47904854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 47904855 . G . LowGQ END=47904855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 47904856 . C . PASS END=47904856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 47904857 . A . LowGQ END=47904857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:9,0,187:6,0 chr1 47904858 . G . PASS END=47904859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 47904860 . C . PASS END=47904861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 47904862 . T . PASS END=47904862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 47904863 . G . PASS END=47904866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 47904867 . G . LowGQ END=47904867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:7,0 chr1 47904868 . C . PASS END=47904869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 47904870 . T . PASS END=47904874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 47904875 . G . PASS END=47904875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 47904876 . G . PASS END=47904885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 47904886 . T . PASS END=47904887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:20:12:0,20,410:0,20,255:11,0 chr1 47904888 . G . PASS END=47904888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904889 . G . PASS END=47904889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 47904890 . C . PASS END=47904891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904892 . G . PASS END=47904892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 47904893 . C . PASS END=47904899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 47904900 . G . PASS END=47904900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 47904901 . C . PASS END=47904904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904905 . C . PASS END=47904905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 47904906 . T . PASS END=47904907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904908 . C . PASS END=47904908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 47904909 . G C, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,5,0:0,7,0:33:121,36,0,465,36,465:255,39,0:0,0:8.3119e+01,3.3119e+01,2.1193e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,6:0,0,7,5 chr1 47904910 . C . PASS END=47904910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904911 . G . PASS END=47904911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 47904912 . G . PASS END=47904915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:12,0 chr1 47904916 . C . PASS END=47904916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 47904917 . C . PASS END=47904919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904920 . G . LowGQ END=47904920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 47904921 . A . PASS END=47904921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904922 . G . PASS END=47904922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 47904923 . T . PASS END=47904923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904924 . C . PASS END=47904924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 47904925 . C . PASS END=47904926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 47904927 . C . LowGQ END=47904927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:12,0 chr1 47904928 . C . PASS END=47904946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 47904947 . G . PASS END=47904947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 47904948 . G . PASS END=47904949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 47904950 . T . PASS END=47904974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,429:0,39,255:13,0 chr1 47904975 . G . PASS END=47904976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 47904977 . C . PASS END=47904979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 47904980 . C . PASS END=47904990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:8,0 chr1 47904991 . C . PASS END=47904994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 47904995 . C . PASS END=47904995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 47904996 . G . PASS END=47904997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 47904998 . T . PASS END=47904998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 47904999 . G . PASS END=47905002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 47905003 . C . PASS END=47905056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 47905057 . T . PASS END=47905057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 47905058 . C . PASS END=47905062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 47905063 . G . PASS END=47905063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 47905064 . C . PASS END=47905069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 47905070 . T . PASS END=47905070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 47905071 . G . PASS END=47905072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 47905073 . C . PASS END=47905096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 47905097 . C . PASS END=47905097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 47905098 . G . PASS END=47905130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:18,0 chr1 47905131 . G . PASS END=47905131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 47905132 . C . PASS END=47905145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 47905146 . G . PASS END=47905153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 47905154 . C . PASS END=47905156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 47905157 . G . PASS END=47905158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 47905159 . T . PASS END=47905160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 47905161 . T . PASS END=47905161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:17,0 chr1 47905162 . T . PASS END=47905167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 47905168 . T . PASS END=47905216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:22,0 chr1 47905217 . G . PASS END=47905217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 47905218 . C . PASS END=47905218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 47905219 . A . PASS END=47905227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 47905228 . A . PASS END=47905279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:19,0 chr1 47905280 . T . PASS END=47905280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 47905281 . G . PASS END=47905294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 47905295 . A . PASS END=47905295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 48226861 . T . PASS END=48226951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,96,255:40,0 chr1 48226952 . C . PASS END=48226952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 48231447 . C . PASS END=48231448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 48231449 . A . PASS END=48231452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 48231453 . A . PASS END=48231453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 48231454 . A . PASS END=48231460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 48231461 . G . PASS END=48231461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 48231462 . T . PASS END=48231467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 48231468 . G . PASS END=48231468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 48231469 . C . PASS END=48231474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 48231475 . A . PASS END=48231478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:18,0 chr1 48231479 . G . PASS END=48231479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 48231480 . T . PASS END=48231487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:19,0 chr1 48231488 . C . PASS END=48231511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 48231512 . G . PASS END=48231527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,895:0,81,255:27,0 chr1 48231528 . G . PASS END=48231528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 48231529 . A . PASS END=48231529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,917:0,53,255:24,0 chr1 48231530 . C . PASS END=48231544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,938:0,78,255:26,0 chr1 48231545 . T . PASS END=48231546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 48231547 . T . PASS END=48231547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:26,0 chr1 48231548 . G . PASS END=48231586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,947:0,78,255:26,0 chr1 48231587 . A . PASS END=48231587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 48231588 . G . PASS END=48231627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,892:0,69,255:24,0 chr1 48231628 . G . PASS END=48231639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:18,0 chr1 48231640 . G . PASS END=48231642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 48231643 . C . PASS END=48231678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr1 48231679 . G . PASS END=48231679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 48231680 . T . PASS END=48231682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 48231683 . T . PASS END=48231685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 48231686 . T . PASS END=48231687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:10,0 chr1 48231688 . T . PASS END=48231688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 48231689 . T . PASS END=48231689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:10,0 chr1 48231690 . G . PASS END=48231690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:11,0 chr1 48231691 . T . PASS END=48231695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 48231696 . G . PASS END=48231696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 48231697 . G . PASS END=48231702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 48231703 . A . PASS END=48231703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 48231704 . A . PASS END=48231705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 48231706 . C . PASS END=48231706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 48231707 . T . PASS END=48231719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 48231720 . T . PASS END=48231723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 48231724 . G T, 0.01 DRAGENSnpHardQUAL DP=10;MQ=250.00;MQRankSum=1.393;ReadPosRankSum=-1.741;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:4,1,0:5,0,0:26:9,0,50,36,322,358:9,0,255:9,0:1.0693e-02,2.6093e+01,7.9093e+01,6.1868e+01,3.8277e+02,3.8677e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,0,1:5,4,0,1 chr1 48231725 . G . PASS END=48231726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 48231727 . C . PASS END=48231727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 48231728 . C . PASS END=48231758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 48231759 . G . PASS END=48231776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 48231777 . T . PASS END=48231778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 48240627 . T . PASS END=48240681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:92:0,120,1800:0,255,255:40,0 chr1 48240842 . C . PASS END=48240883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1157:0,90,255:31,0 chr1 48240884 . C . PASS END=48240885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 48240886 . C . PASS END=48240919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr1 48240920 . T . PASS END=48240977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,876:0,61,255:26,0 chr1 48240978 . G . PASS END=48240978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:20,0 chr1 48240979 . G . PASS END=48240988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:22,0 chr1 48240989 . T . PASS END=48241001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,729:0,49,255:19,0 chr1 48241002 . G . PASS END=48241004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 48241005 . C . PASS END=48241005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 48241006 . G . PASS END=48241024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 48241025 . G . PASS END=48241025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 48241026 . C . PASS END=48241026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:25,0 chr1 48241027 . T . PASS END=48241040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:31,0 chr1 48241041 . C . PASS END=48241041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 48241042 . A . PASS END=48241057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1119:0,93,255:31,0 chr1 48241058 . G . PASS END=48241058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 48241059 . C . PASS END=48241063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 48241064 . C . PASS END=48241103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,853:0,62,255:26,0 chr1 48241104 . G . PASS END=48241104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 48241105 . G . PASS END=48241106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 48241107 . C . PASS END=48241111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 48243332 . T . PASS END=48243343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:26,0 chr1 48243344 . G . PASS END=48243344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 48243345 . G . PASS END=48243345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 48243346 . C . PASS END=48243358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1017:0,87,255:29,0 chr1 48243359 . A . PASS END=48243359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 48243360 . G . PASS END=48243361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 48243362 . T . PASS END=48243363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1041:0,74,255:29,0 chr1 48243364 . C . PASS END=48243372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1113:0,80,255:33,0 chr1 48243373 . T . PASS END=48243373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr1 48243374 . C . PASS END=48243383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:33,0 chr1 48243384 . A . PASS END=48243384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:32,0 chr1 48243385 . T . PASS END=48243386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:33,0 chr1 48243387 . C . PASS END=48243387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 48243388 . T . PASS END=48243427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1180:0,83,255:38,0 chr1 48243428 . T . PASS END=48243428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr1 48243429 . G . PASS END=48243451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:38:0,81,1324:0,81,255:40,0 chr1 48243452 . G . PASS END=48243468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1233:0,86,255:34,0 chr1 48243469 . T . PASS END=48243469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:30,0 chr1 48243470 . C . PASS END=48243488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1133:0,80,255:31,0 chr1 48243489 . T C, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=1.637;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,15,0:0.517,0.000:29:4,8,0:10,7,0:48:85,0,50,536,501,1037:255,0,255:14,0:5.0000e+01,6.5492e-05,5.2928e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,5,10:7,7,8,7 chr1 48243490 . C . PASS END=48243506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,1031:0,63,255:26,0 chr1 48244126 . C . PASS END=48244134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:35,0 chr1 48244135 . G . PASS END=48244136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:70:36:0,70,1285:0,70,255:34,0 chr1 48244137 . C . PASS END=48244214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1333:0,104,255:38,0 chr1 48244215 . A . PASS END=48244215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 48244216 . C . PASS END=48244216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 48247137 . C . PASS END=48247237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,101,1199:0,101,255:40,0 chr1 48247238 . T . PASS END=48247238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:35,0 chr1 48247239 . T . PASS END=48247241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1300:0,80,255:35,0 chr1 48260258 . C . PASS END=48260376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:82:42:0,82,1421:0,82,255:40,0 chr1 48260377 . T . PASS END=48260377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1635:0,75,255:37,0 chr1 48260378 . C . PASS END=48260411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:35:0,83,1260:0,83,255:39,0 chr1 48260412 . G . PASS END=48260412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:27,0 chr1 48260413 . G . PASS END=48260414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:23,0 chr1 48260415 . G . PASS END=48260427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:26:0,51,765:0,51,255:19,0 chr1 48260428 . G . PASS END=48260428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:16,0 chr1 48260429 . G . PASS END=48260430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:51:26:0,51,765:0,61,255:17,0 chr1 48260431 . A . PASS END=48260431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:16,0 chr1 48260432 . G . PASS END=48260432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,668:0,22,255:15,0 chr1 48267145 . C . PASS END=48267153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr1 48267154 . G . PASS END=48267154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 48267155 . T . PASS END=48267176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,863:0,62,255:26,0 chr1 48267177 . T . PASS END=48267177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 48267178 . G . PASS END=48267187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 48267188 . C . PASS END=48267194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1157:0,87,255:31,0 chr1 48267195 . A . PASS END=48267195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 48267196 . G . PASS END=48267210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 48267211 . C . PASS END=48267211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 48267212 . T . PASS END=48267213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 48267214 . C . PASS END=48267214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 48267215 . G . PASS END=48267231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1202:0,83,255:32,0 chr1 48267232 . C . PASS END=48267232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr1 48267233 . A . PASS END=48267247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1172:0,80,255:30,0 chr1 48267248 . A . PASS END=48267261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,67,255:25,0 chr1 48267262 . C . PASS END=48267262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 48267263 . A . PASS END=48267264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 48267265 . C . PASS END=48267265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:21,0 chr1 48267266 . A . PASS END=48267266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 48267267 . G . PASS END=48267280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 48267281 . G . PASS END=48267283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:17:0,39,585:0,51,255:13,0 chr1 48267284 . A . PASS END=48267284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 48267285 . A . PASS END=48267285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 48267286 . C . PASS END=48267286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 48267287 . A . PASS END=48267291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:13,0 chr1 48284010 . C . PASS END=48284019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:25,0 chr1 48284020 . G . PASS END=48284026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1149:0,84,255:31,0 chr1 48284027 . C . PASS END=48284027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,959:0,76,255:30,0 chr1 48284028 . C . LowGQ END=48284028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,11:30:0:30:0,0,363:129,0,255:19,0 chr1 48284029 . C . PASS END=48284065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:31:0,93,1069:0,93,255:38,0 chr1 48284066 . T . PASS END=48284073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1399:0,84,255:38,0 chr1 48284074 . A . PASS END=48284074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1358:0,68,255:35,0 chr1 48284075 . G . PASS END=48284267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1202:0,83,255:40,0 chr1 48284268 . C . PASS END=48284273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,71,255:26,0 chr1 48284274 . G . PASS END=48284280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:54:27:0,54,810:0,65,255:19,0 chr1 48459706 . C . PASS END=48459714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,783:0,75,255:26,0 chr1 48459715 . G . PASS END=48459721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 48459722 . C . PASS END=48459723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 48459724 . G . PASS END=48459728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 48459729 . T . PASS END=48459729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 48459730 . G . PASS END=48459730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 48459731 . A . PASS END=48459731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 48459732 . G . PASS END=48459732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 48459733 . G . PASS END=48459733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 48459734 . G . PASS END=48459736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 48459737 . T . PASS END=48459737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 48459738 . G . PASS END=48459811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1148:0,80,255:37,0 chr1 48459812 . T . PASS END=48459812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:34,0 chr1 48459813 . C . PASS END=48459839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,92,255:36,0 chr1 48459840 . C . PASS END=48459840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 48459841 . G . PASS END=48459842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 48459843 . C . PASS END=48459843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 48459844 . C . PASS END=48459849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 48459850 . T . PASS END=48459850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 48459851 . G . PASS END=48459853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 48459854 . A . PASS END=48459857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 48459858 . A . PASS END=48459859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 48459860 . T . PASS END=48459860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,839:0,73,255:26,0 chr1 48459861 . T . PASS END=48459861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 48459862 . T . PASS END=48459864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 48459865 . C . PASS END=48459865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 48459866 . A . PASS END=48459867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 48459868 . G . PASS END=48459868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 48459869 . A . PASS END=48459869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 48459870 . G . PASS END=48459871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 48459872 . A . PASS END=48459896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,905:0,65,255:26,0 chr1 48459897 . C . PASS END=48459899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 48459900 . A . PASS END=48459900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:27,0 chr1 48459901 . G . PASS END=48459914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 48459915 . C . PASS END=48459918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,979:0,73,255:26,0 chr1 48459919 . G . PASS END=48459919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 48459920 . A . PASS END=48459920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 48459921 . A . PASS END=48459921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 48459922 . T . PASS END=48459922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 48459923 . A . PASS END=48459945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 48459946 . G . PASS END=48459946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 48459947 . C . PASS END=48459961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 48459962 . G . PASS END=48459963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,784:0,55,255:21,0 chr1 48459964 . C . PASS END=48459976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 48459977 . A . PASS END=48459979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 48459980 . A . PASS END=48459980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 48459981 . T . PASS END=48459983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 48459984 . A . PASS END=48459986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 48459987 . T . PASS END=48459987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:18,0 chr1 48459988 . C . PASS END=48460013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:18:0,41,651:0,41,255:19,0 chr1 48460014 . G . PASS END=48460014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 48460015 . C . PASS END=48460016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 48460017 . A . PASS END=48460017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 48460018 . G . PASS END=48460021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 48460022 . A . PASS END=48460022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 48460023 . G . PASS END=48460029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 48460030 . G . PASS END=48460040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:21,0 chr1 48460041 . C . PASS END=48460041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 48460042 . C . PASS END=48460075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 48460076 . C . PASS END=48460076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 48460077 . T . PASS END=48460091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 48460092 . T . PASS END=48460092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,729:0,35,255:20,0 chr1 48460093 . G . PASS END=48460095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 48460096 . G . PASS END=48460096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:24,0 chr1 48460097 . T . PASS END=48460121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:25:0,67,919:0,67,255:26,0 chr1 48460122 . A . PASS END=48460122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,795:0,39,255:25,0 chr1 48460123 . G . PASS END=48460133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 48460134 . T . PASS END=48460138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 48460139 . G . PASS END=48460244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1080:0,83,255:40,0 chr1 48460245 . A . PASS END=48460245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 48460246 . C . PASS END=48460261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1096:0,90,255:30,0 chr1 48460262 . T . PASS END=48460262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 48460263 . C . PASS END=48460264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 48460265 . C . PASS END=48460265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 48460266 . T . PASS END=48460269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 48462360 . C . PASS END=48462367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 48462368 . G . PASS END=48462369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 48462370 . G . PASS END=48462400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 48462401 . G . PASS END=48462414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr1 48462415 . G . PASS END=48462432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 48462433 . A . PASS END=48462447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 48462448 . A . LowGQ END=48462448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:7,0 chr1 48462449 . G . PASS END=48462458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 48462459 . C . PASS END=48462460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 48462461 . T . PASS END=48462461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:6:7:0,6,90:0,21,255:2,0 chr1 48688409 . A . PASS END=48688429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,970:0,65,255:26,0 chr1 48688430 . A . PASS END=48688430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 48688431 . T . PASS END=48688433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,864:0,61,255:26,0 chr1 48688434 . G . PASS END=48688570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1064:0,83,255:40,0 chr1 48690396 . T . PASS END=48690467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,99,1431:0,99,255:40,0 chr1 48694522 . A . PASS END=48694627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:33:0,82,1133:0,82,255:40,0 chr1 48694729 . A . PASS END=48695043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:61:0,120,1800:0,163,255:40,0 chr1 48695044 . G . PASS END=48695080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,171,255:40,1 chr1 48695081 . G A, 49.79 PASS DP=66;MQ=249.88;MQRankSum=6.915;ReadPosRankSum=3.119;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,31,0:0.477,0.000:65:10,16,0:24,15,0:48:85,0,50,1070,1201,2272:255,0,255:27,0:4.9791e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,25,9,22:21,13,14,17 chr1 48695082 . T . PASS END=48695118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,108,1512:0,110,255:40,1 chr1 48695119 . C . PASS END=48695131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1313:0,100,255:36,0 chr1 48696272 . A . PASS END=48696358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1125:0,80,255:36,0 chr1 48696359 . G . PASS END=48696372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:26:0,63,945:0,78,255:24,0 chr1 48696373 . T . PASS END=48696377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:24:0,48,720:0,72,255:16,0 chr1 48697217 . G . PASS END=48697290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,1119:0,82,255:40,0 chr1 48697291 . T . PASS END=48697291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:29,0 chr1 48697292 . T . PASS END=48697297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1153:0,80,255:30,0 chr1 48697618 . G . PASS END=48697618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 48697619 . C . PASS END=48697626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 48697627 . A . PASS END=48697629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 48697630 . T . PASS END=48697630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,637:0,30,255:16,0 chr1 48697631 . G . PASS END=48697631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 48697632 . G . PASS END=48697634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 48697635 . T . PASS END=48697635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 48697636 . G . PASS END=48697657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:26,0 chr1 48697658 . G . PASS END=48697695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1041:0,80,255:32,0 chr1 48697696 . C . PASS END=48697729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1131:0,80,255:32,0 chr1 48697730 . C . PASS END=48697732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:25,0 chr1 48697733 . T G, 142.68 PASS DP=33;MQ=250.00;FractionInformativeReads=0.970 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,10,0:0,22,0:93:180,96,0,280,280,280:255,96,0:0,0:1.4268e+02,9.2677e+01,0.0000e+00,2.7745e+02,3.1222e+02,2.8046e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,18:0,0,16,16 chr1 48697734 . C . PASS END=48697734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:28,2 chr1 48697735 . T . PASS END=48697735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1127:0,36,255:28,2 chr1 48697736 . T . PASS END=48697736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:28,0 chr1 48697737 . C . PASS END=48697744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1072:0,87,255:29,0 chr1 48697745 . T . PASS END=48697745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 48697746 . G . PASS END=48697750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1058:0,90,255:32,0 chr1 48697751 . C T, 45.56 PASS DP=34;MQ=248.13;MQRankSum=3.948;ReadPosRankSum=0.805;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,12,0:0.364,0.000:33:7,4,0:14,8,0:44:80,0,47,180,180,180:255,0,255:19,0:4.5564e+01,1.6412e-04,5.0000e+01,1.8033e+02,2.1510e+02,1.8334e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,14,8,4:11,10,6,6 chr1 48697752 . G . PASS END=48697785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1122:0,88,255:35,0 chr1 48697786 . T . PASS END=48697786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1140:0,60,255:30,0 chr1 48697787 . C . PASS END=48697787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 48697788 . A . PASS END=48697788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr1 48697789 . C . PASS END=48697791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 48697792 . T . PASS END=48697794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:27,0 chr1 48697795 . T . PASS END=48697795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1025:0,41,255:27,0 chr1 48697796 . G . PASS END=48697796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 48697797 . G . PASS END=48697798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:26,0 chr1 48697799 . C . PASS END=48697799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 48697800 . A . PASS END=48697806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,950:0,45,255:24,0 chr1 48697807 . G . PASS END=48697807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 48697808 . T . PASS END=48697809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,946:0,45,255:22,0 chr1 48697810 . G . PASS END=48697811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:22,0 chr1 48697812 . T . PASS END=48697813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 48697814 . C . PASS END=48697818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:21,0 chr1 48697819 . A . PASS END=48697819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,714:0,14,255:15,0 chr1 48697820 . C . PASS END=48697820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:16,0 chr1 48697821 . C . PASS END=48697821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,751:0,14,255:16,0 chr1 48697822 . A . PASS END=48697822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:18,0 chr1 48697823 . G . PASS END=48697823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 48698039 . G . PASS END=48698042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 48698043 . T . PASS END=48698043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 48698044 . T . PASS END=48698044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 48698045 . G . PASS END=48698125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1022:0,82,255:38,0 chr1 48698126 . A . PASS END=48698126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr1 48698127 . T . PASS END=48698145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:32,0 chr1 48698146 . T . PASS END=48698148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 48698149 . C . PASS END=48698152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 48698153 . A . PASS END=48698165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 48698166 . T . PASS END=48698166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 48698167 . G . PASS END=48698174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 48699327 . A . PASS END=48699434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:40:0,96,1496:0,96,255:40,0 chr1 48701401 . G . PASS END=48701413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1229:0,102,255:35,0 chr1 48701414 . G . PASS END=48701414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 48701415 . A . PASS END=48701421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1302:0,92,255:35,0 chr1 48701422 . C . PASS END=48701422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr1 48701423 . C . PASS END=48701529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:36:0,84,1385:0,84,255:40,0 chr1 48701530 . A . PASS END=48701551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1396:0,84,255:38,0 chr1 48703351 . A . PASS END=48703354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:19,0 chr1 48703355 . T . PASS END=48703355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,507:0,24,255:17,0 chr1 48703356 . T . PASS END=48703360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 48703361 . G . PASS END=48703371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,790:0,63,255:25,0 chr1 48703372 . T . PASS END=48703372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 48703373 . G . PASS END=48703388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr1 48703389 . G . PASS END=48703389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 48703390 . G . PASS END=48703390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 48703391 . A . PASS END=48703639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,986:0,81,255:40,0 chr1 48704994 . G . PASS END=48704994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 48704995 . G . PASS END=48704995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 48704996 . A . PASS END=48704996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 48704997 . G . PASS END=48705000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr1 48705001 . T . PASS END=48705001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 48705002 . C . PASS END=48705007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr1 48705008 . C . PASS END=48705008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:24,0 chr1 48705009 . C . PASS END=48705018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 48705019 . G . PASS END=48705027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 48705028 . T . PASS END=48705028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 48705029 . G . PASS END=48705070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1194:0,84,255:36,0 chr1 48705071 . A . PASS END=48705071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 48705072 . G . PASS END=48705178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,90,255:40,0 chr1 48705179 . C . PASS END=48705209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 48707616 . G . PASS END=48707618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 48707619 . C . PASS END=48707619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 48707620 . C . PASS END=48707645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 48707646 . A . PASS END=48707674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 48707675 . C . PASS END=48707693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,615:0,40,255:19,0 chr1 48708129 . C . PASS END=48708134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,884:0,72,255:26,0 chr1 48708135 . C . PASS END=48708146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:33,0 chr1 48708147 . T . PASS END=48708147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr1 48708148 . G . PASS END=48708190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:33:0,95,1249:0,95,255:40,0 chr1 48708191 . C . PASS END=48708227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,128,255:40,0 chr1 48708228 . G T, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=3.917;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,26,0:0.531,0.000:49:15,16,0:8,10,0:48:85,0,50,930,823,1752:255,0,255:23,0:5.0000e+01,6.7045e-05,5.2668e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,7,9,17:12,11,11,15 chr1 48708229 . A . PASS END=48708265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,111,1665:0,120,255:40,0 chr1 48708266 . C . PASS END=48708288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,101,255:37,0 chr1 48712673 . G . PASS END=48712686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:82:0,120,1800:0,233,255:40,0 chr1 48713007 . C . PASS END=48713015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:30,0 chr1 48713016 . G . PASS END=48713016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr1 48713017 . G . PASS END=48713018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 48713019 . C . PASS END=48713019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:25,0 chr1 48713020 . C . PASS END=48713022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 48713023 . G . PASS END=48713023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 48713024 . G . PASS END=48713026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1145:0,80,255:29,0 chr1 48713027 . A . PASS END=48713027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr1 48713028 . A . PASS END=48713029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1163:0,80,255:29,0 chr1 48713030 . T . PASS END=48713030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:28,0 chr1 48713031 . T . PASS END=48713034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 48713035 . C . PASS END=48713035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 48713036 . T . PASS END=48713058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1119:0,86,255:36,0 chr1 48713059 . T . PASS END=48713059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr1 48713060 . G . PASS END=48713061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 48713062 . A . PASS END=48713062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 48713063 . A . PASS END=48713078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:38:0,82,1435:0,82,255:38,0 chr1 48713079 . T . PASS END=48713079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:37,0 chr1 48713080 . G . PASS END=48713082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:40:0,82,1435:0,82,255:39,0 chr1 48713083 . C . PASS END=48713083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:38,0 chr1 48713084 . C . PASS END=48713196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,89,255:40,0 chr1 48713197 . C . PASS END=48713215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,889:0,70,255:25,0 chr1 48727316 . T . PASS END=48727340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:75:0,120,1800:0,197,255:40,0 chr1 48764385 . T . PASS END=48764407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:36,0 chr1 48764408 . A . PASS END=48764408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:32,0 chr1 48764409 . A . PASS END=48764418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:36:0,81,1349:0,81,255:40,0 chr1 48764419 . C T, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=1.258;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:9,7,0:11,13,0:48:85,0,50,685,679,1364:255,0,255:20,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,8,12,8:7,13,7,13 chr1 48764420 . A . PASS END=48764456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:40:0,105,1371:0,105,255:40,0 chr1 48764457 . G . PASS END=48764535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:93:35:0,93,1395:0,93,255:40,0 chr1 48764536 . T . PASS END=48764536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 48764537 . G . PASS END=48764552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,92,255:33,0 chr1 48764553 . C . PASS END=48764559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,79,255:26,0 chr1 48764560 . C . PASS END=48764562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 48764563 . G . PASS END=48764565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,80,255:24,0 chr1 48771459 . C . PASS END=48771550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:61:0,120,1800:0,181,255:40,0 chr1 48817400 . C . PASS END=48817582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:44:0,120,1800:0,121,255:40,0 chr1 48819142 . A . PASS END=48819144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,1:118:99:118:0,120,1800:0,255,255:40,1 chr1 48821342 . A . PASS END=48821441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,133,255:40,0 chr1 48825258 . C . PASS END=48825442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:92:44:0,92,1530:0,92,255:40,0 chr1 48844960 . T . PASS END=48844974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:42:0,99,1507:0,99,255:40,2 chr1 48844975 . C . PASS END=48844975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1623:0,75,255:40,2 chr1 48844976 . T . PASS END=48844976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1560:0,58,255:40,2 chr1 48844977 . C . PASS END=48844978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:74:48:0,74,1578:0,74,255:40,2 chr1 48844979 . C . PASS END=48845007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,103,1561:0,103,255:40,0 chr1 48850981 . C . PASS END=48851021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,148,255:40,0 chr1 48858927 . C . PASS END=48858972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:35:0,92,1371:0,92,255:40,0 chr1 48860939 . C . PASS END=48861026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,106,1322:0,106,255:40,0 chr1 48865023 . A . PASS END=48865055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1056:0,83,255:37,0 chr1 48865056 . T . PASS END=48865056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr1 48865057 . T . PASS END=48865316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:37:0,90,1350:0,101,255:40,0 chr1 48866445 . C . PASS END=48866453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:79:0,120,1800:0,221,255:40,0 chr1 48866462 . T . PASS END=48866488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,210,255:40,0 chr1 48869474 . C . PASS END=48869554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:61:0,120,1800:0,166,255:40,0 chr1 48872804 . C . PASS END=48872867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,131,255:40,0 chr1 48873359 . C . PASS END=48873387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,186,255:40,0 chr1 48877136 . T . PASS END=48877248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:36:0,81,1215:0,91,255:40,0 chr1 48877249 . G . PASS END=48877258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:27:0,72,1080:0,81,255:26,0 chr1 48877259 . C . PASS END=48877275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:16:0,42,630:0,48,255:17,0 chr1 48878782 . C . PASS END=48878823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,1:121:99:109:0,120,1800:0,255,255:40,0 chr1 48917224 . A . PASS END=48917272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:35:0,105,1260:0,105,255:40,0 chr1 48918666 . C . PASS END=48918796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:38:0,90,1350:0,111,255:40,0 chr1 48918797 . A . PASS END=48918798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:30,0 chr1 48918799 . G . PASS END=48918801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr1 48918802 . A . PASS END=48918802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr1 48918803 . C . PASS END=48918803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 48937630 . T . PASS END=48937653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,582:0,45,255:19,0 chr1 48937654 . G . PASS END=48937680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 48988253 . C . PASS END=48988364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:36:0,90,1318:0,90,255:40,0 chr1 48999845 . T . PASS END=48999918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:34:0,94,1244:0,94,255:40,0 chr1 48999919 . C . PASS END=48999919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1410:0,54,255:29,0 chr1 48999920 . T . PASS END=48999938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1208:0,81,255:32,0 chr1 48999939 . T . PASS END=48999943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 48999944 . G . PASS END=48999944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:22,0 chr1 48999945 . T . PASS END=48999965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 49000558 . T . PASS END=49000588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:114:0,120,1800:0,255,255:40,0 chr1 49004650 . C . PASS END=49004654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 49004655 . T . PASS END=49004655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 49004656 . G . PASS END=49004716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1164:0,86,255:36,0 chr1 49004717 . C . PASS END=49004749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,864:0,72,255:25,0 chr1 49004750 . T . PASS END=49004750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 49004751 . C . PASS END=49004758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:22,0 chr1 49005314 . C . PASS END=49005410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:36:0,92,1302:0,92,255:40,0 chr1 49052581 . T . PASS END=49052585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1224:0,83,255:31,0 chr1 49052586 . T . PASS END=49052586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 49052587 . G . PASS END=49052838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:31:0,90,1304:0,93,255:40,0 chr1 49056505 . A . PASS END=49056657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,105,1404:0,105,255:40,2 chr1 49100153 . T . PASS END=49100276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:41:0,90,1350:0,96,255:40,0 chr1 49108745 . A G, 50.00 PASS DP=56;MQ=249.93;MQRankSum=5.878;ReadPosRankSum=3.694;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,32,0:0.582,0.000:55:12,10,0:11,22,0:46:85,0,45,185,185,185:255,0,255:24,0:5.0000e+01,1.0484e-04,4.8496e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,16,11,21:12,11,23,9 chr1 49113622 . A G, 49.93 PASS DP=46;MQ=250.00;MQRankSum=5.794;ReadPosRankSum=5.794;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,22,0:0.478,0.000:46:16,12,0:8,10,0:48:85,0,50,787,753,1539:255,0,255:22,0:4.9934e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,10,12:16,8,12,10 chr1 49119009 . C . PASS END=49119123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:39:0,93,1440:0,93,255:40,0 chr1 49124727 . C . PASS END=49124728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 49124729 . G . PASS END=49124729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 49124730 . G . PASS END=49124730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 49124731 . T . PASS END=49124801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1139:0,80,255:39,0 chr1 49126778 . G A, 37.98 PASS DP=47;MQ=250.00;MQRankSum=5.466;ReadPosRankSum=1.152;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:32,15,0:0.319,0.000:47:18,10,0:14,5,0:38:73,0,50,500,1137,1636:255,0,255:29,0:3.7977e+01,7.1373e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,14,5,10:12,20,6,9:49126778 chr1 49128824 . C . PASS END=49128914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,120,1800:0,158,255:40,0 chr1 49193558 . T . PASS END=49193711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:87:38:0,87,1395:0,87,255:40,0 chr1 49193712 . C . PASS END=49193715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:36:0,69,1035:0,75,255:23,0 chr1 49201911 . C . PASS END=49201914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 49201915 . G . PASS END=49201915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 49201916 . A . PASS END=49201916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,999:0,51,255:28,0 chr1 49201917 . C . PASS END=49201925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1074:0,82,255:32,0 chr1 49201926 . G . PASS END=49201927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:61:33:0,61,944:0,61,255:31,0 chr1 49201928 . T . PASS END=49201965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:34:0,88,1227:0,88,255:40,0 chr1 49201966 . C . PASS END=49201966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1607:0,67,255:40,2 chr1 49201967 . T . PASS END=49202124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:46:0,89,1628:0,89,255:40,0 chr1 49208295 . C . PASS END=49208295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 49208296 . T . PASS END=49208296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 49208297 . T . PASS END=49208307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:26,0 chr1 49208308 . A . PASS END=49208443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,1031:0,80,255:40,0 chr1 49219802 . A . PASS END=49219865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,104,1349:0,104,255:40,0 chr1 49224572 . C . PASS END=49224583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 49224584 . G T, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,5,0:0,15,0:57:145,60,0,768,60,768:255,60,0:0,0:1.0719e+02,5.7191e+01,8.2835e-06,4.5000e+02,9.1961e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,5:0,0,8,12 chr1 49224585 . C . PASS END=49224594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 49224595 . A . PASS END=49224606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:19,0 chr1 49224607 . C . PASS END=49224621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:24,0 chr1 49224622 . C . PASS END=49224624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 49224625 . A . PASS END=49224625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 49224626 . G . PASS END=49224646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 49224647 . G . PASS END=49224648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 49224649 . G . PASS END=49224656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 49224657 . C . PASS END=49224702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:19,0 chr1 49224703 . T . PASS END=49224703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 49224704 . C . PASS END=49224726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,653:0,54,255:19,0 chr1 49224727 . A . PASS END=49224773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:21:0,61,782:0,61,255:26,0 chr1 49224774 . A . PASS END=49224782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr1 49224783 . C . PASS END=49224783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 49224784 . A . PASS END=49224787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 49224788 . C . PASS END=49224789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 49224790 . G . PASS END=49224792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 49224793 . T . PASS END=49224793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 49224794 . C . PASS END=49224835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1033:0,87,255:30,0 chr1 49224836 . C . PASS END=49224836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 49224837 . G . PASS END=49224841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 49224842 . C . PASS END=49224865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr1 49224866 . C . PASS END=49224870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,67,255:19,0 chr1 49224871 . C . PASS END=49224891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,620:0,60,255:21,0 chr1 49224892 . A . PASS END=49224892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 49224893 . G . PASS END=49224902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 49224903 . C . PASS END=49224903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:17,0 chr1 49224904 . A . PASS END=49224934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,598:0,41,255:17,0 chr1 49224935 . T . PASS END=49224953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 49224954 . T . LowGQ END=49224956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:12:0,0,352:0,0,255:11,0 chr1 49227009 . C . PASS END=49227142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:44:0,114,1710:0,128,255:40,0 chr1 49241637 . C . PASS END=49241650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:23,0 chr1 49241651 . C . PASS END=49241652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 49241653 . G . PASS END=49241655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 49241656 . A . PASS END=49241656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 49241657 . G . PASS END=49241672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,933:0,69,255:26,0 chr1 49241673 . G . PASS END=49241677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 49241678 . G . PASS END=49241700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,931:0,75,255:26,0 chr1 49242278 . C . PASS END=49242278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr1 49242279 . T . PASS END=49242279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr1 49242280 . G . PASS END=49242280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 49242281 . C . PASS END=49242281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:16,0 chr1 49242282 . C . PASS END=49242290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,576:0,51,255:17,0 chr1 49242291 . G . PASS END=49242292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,529:0,27,255:17,0 chr1 49242293 . T . PASS END=49242298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:17,0 chr1 49242299 . C . LowGQ END=49242300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,590:1,0,255:17,0 chr1 49242301 . T . PASS END=49242302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 49242303 . G . PASS END=49242303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,592:0,30,255:17,0 chr1 49242304 . T . PASS END=49242305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 49242306 . G . LowGQ END=49242306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,565:0,0,255:16,0 chr1 49242307 . A . PASS END=49242307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:19,0 chr1 49242308 . G . PASS END=49242308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,590:0,16,255:17,0 chr1 49242309 . C . LowGQ END=49242309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,405:54,0,255:15,0 chr1 49242310 . A . PASS END=49242311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 49242312 . C . PASS END=49242312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 49242313 . A . PASS END=49242313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,543:0,13,255:18,0 chr1 49242314 . G . PASS END=49242315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:19,0 chr1 49242316 . G . PASS END=49242316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:7:21:0,7,552:0,7,255:19,0 chr1 49242317 . C . PASS END=49242317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:20,0 chr1 49242318 . G . LowGQ END=49242318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,541:3,0,255:17,0 chr1 49242319 . C . PASS END=49242319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 49242320 . C . PASS END=49242321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr1 49242322 . C . LowGQ END=49242323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,7:22:0:22:0,0,383:6,0,255:18,0 chr1 49242324 . G . PASS END=49242324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr1 49242325 . T . LowGQ END=49242326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,432:39,0,255:16,0 chr1 49242327 . G . PASS END=49242327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 49242328 . C . LowGQ END=49242328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,7:22:0:22:0,0,332:109,0,255:13,0 chr1 49242329 . G . PASS END=49242334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,790:0,50,255:19,0 chr1 49242335 . C . PASS END=49242335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,623:0,24,255:18,0 chr1 49242336 . G . PASS END=49242336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:7:21:0,7,517:0,7,255:17,0 chr1 49242337 . C . PASS END=49242337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:18,0 chr1 49242338 . G . LowGQ END=49242338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,529:9,0,255:16,0 chr1 49242339 . C . PASS END=49242345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 49242346 . C . PASS END=49242346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr1 49242347 . T . PASS END=49242354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,616:0,60,255:20,0 chr1 49242355 . C . PASS END=49242362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,660:0,43,255:19,0 chr1 49242363 . C . PASS END=49242364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 49242365 . A . PASS END=49242368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr1 49242369 . C . PASS END=49242374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 49242375 . G . PASS END=49242375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 49242376 . C . PASS END=49242377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 49242378 . C . PASS END=49242379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,828:0,53,255:19,0 chr1 49242380 . G . PASS END=49242407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:17:0,48,613:0,51,255:19,0 chr1 49242408 . A . PASS END=49242408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:15,0 chr1 49242409 . A . PASS END=49242413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 49242414 . C . PASS END=49242414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 49242415 . A . PASS END=49242418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 49242419 . G . PASS END=49242419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 49242420 . C . PASS END=49242420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 49242421 . G . PASS END=49242432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,643:0,51,255:18,0 chr1 49242433 . A . PASS END=49242434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 49242435 . G . PASS END=49242445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 49242446 . A . PASS END=49242449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 49242450 . C . PASS END=49242452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 49242453 . G . PASS END=49242467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 49242468 . G . PASS END=49242468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 49242469 . A . PASS END=49242472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:12,0 chr1 49242473 . T . PASS END=49242473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 49242474 . G . PASS END=49242492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 49242493 . A . PASS END=49242503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:8,0 chr1 49244807 . T . PASS END=49244808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 49244809 . A . PASS END=49244844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,989:0,84,255:34,0 chr1 49244845 . G . PASS END=49244845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr1 49244846 . C . PASS END=49244883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:33,0 chr1 49244884 . T . PASS END=49244889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:31:0,69,1035:0,79,255:23,0 chr1 49244890 . A . PASS END=49244891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:26:31:0,26,853:0,26,255:21,0 chr1 49244892 . C . PASS END=49244892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,919:0,59,255:20,0 chr1 49244893 . T . PASS END=49244903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr1 49244904 . T . PASS END=49244904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr1 49283875 . T . PASS END=49283894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:88:0,120,1800:0,190,255:40,0 chr1 49330702 . T . PASS END=49330702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 49330703 . C . PASS END=49330703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 49330704 . A . PASS END=49330714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:30:0,86,1088:0,86,255:34,0 chr1 49330715 . A . PASS END=49330715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:33,0 chr1 49330716 . G . PASS END=49330730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1604:0,116,255:40,0 chr1 49330731 . C . PASS END=49330766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:48:0,112,1800:0,112,255:40,0 chr1 49330767 . G . PASS END=49330803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,139,255:40,0 chr1 49330804 . C A, 49.98 PASS DP=58;MQ=249.62;MQRankSum=6.528;ReadPosRankSum=3.058;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,28,0:0.483,0.000:58:12,19,0:18,9,0:47:85,0,47,185,185,185:255,0,255:28,0:4.9975e+01,8.6978e-05,5.0000e+01,1.8475e+02,2.1952e+02,1.8776e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,15,12,16:17,13,15,13 chr1 49330805 . G . PASS END=49330841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,131,255:40,0 chr1 49330842 . C . PASS END=49330844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 49332863 . C . PASS END=49332902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,129,255:40,0 chr1 49511256 . C . PASS END=49511259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,923:0,78,255:26,0 chr1 49511260 . C . PASS END=49511454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,980:0,81,255:40,0 chr1 49511455 . T . PASS END=49511455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:29,0 chr1 49511456 . T . PASS END=49511460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 49511461 . G . PASS END=49511472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 49711442 . C . PASS END=49711536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,120,1800:0,128,255:40,0 chr1 50162949 . C . PASS END=50163093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:39:0,99,1313:0,104,255:40,0 chr1 50163094 . A . PASS END=50163094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:32,0 chr1 50163095 . C . PASS END=50163096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:38:0,87,1305:0,98,255:32,0 chr1 50163097 . C . PASS END=50163107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:32:0,69,1035:0,95,255:26,0 chr1 50163108 . A . PASS END=50163109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 50317068 . C . PASS END=50317190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:51:0,120,1800:0,139,255:40,1 chr1 50489435 . C . PASS END=50489436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 50489437 . G . PASS END=50489461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:23,0 chr1 50489462 . C . PASS END=50489462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 50489463 . C . PASS END=50489463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 50489464 . G . PASS END=50489464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 50489465 . C . PASS END=50489466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 50489467 . A . PASS END=50489467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 50489468 . T . PASS END=50489468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 50513837 . A . PASS END=50513854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:16,0 chr1 50569664 . A . PASS END=50569672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,203,255:40,0 chr1 50571575 . A . PASS END=50571622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,198,255:40,0 chr1 50571949 . A . PASS END=50572065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,146,255:40,0 chr1 50574862 . A . PASS END=50574870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,204,255:40,0 chr1 50575613 . A . PASS END=50575629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,148,255:40,0 chr1 50575630 . G . PASS END=50575636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:66:0,120,1800:0,190,255:40,0 chr1 50585644 . A . PASS END=50585680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,131,255:40,0 chr1 50585681 . A . PASS END=50585688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,145,255:40,0 chr1 50586562 . A . PASS END=50586567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,159,255:40,0 chr1 50607525 . A . PASS END=50607530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,167,255:40,0 chr1 50610629 . A . PASS END=50610635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:24,0 chr1 50610636 . G . PASS END=50610637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:42:27:0,42,880:0,42,255:22,0 chr1 50610638 . A . PASS END=50610638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:22,0 chr1 50610639 . C . PASS END=50610869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:29:0,81,1184:0,87,255:40,0 chr1 50642761 . G . PASS END=50642864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,120,1800:0,120,255:40,0 chr1 50643846 . C . PASS END=50643902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,826:0,61,255:26,0 chr1 50643903 . T . PASS END=50643903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 50643904 . G . PASS END=50643905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 50645216 . G . PASS END=50645248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:63:0,120,1800:0,171,255:40,0 chr1 50659437 . G . PASS END=50659590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:34:0,81,1213:0,82,255:40,0 chr1 50661233 . G . PASS END=50661242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1047:0,84,255:37,0 chr1 50661243 . A . PASS END=50661243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1173:0,78,255:34,0 chr1 50661244 . G . PASS END=50661373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:37:0,88,1321:0,88,255:40,0 chr1 50661374 . C . PASS END=50661410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:83:45:0,83,1688:0,83,255:40,1 chr1 50661411 . C T, 184.98 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,29,0:0,17,0:135:223,138,0,1741,138,1741:255,141,0:0,0:1.8498e+02,1.3498e+02,0.0000e+00,4.5000e+02,1.6975e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,30:0,0,31,15 chr1 50661412 . A . PASS END=50661448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:35:0,87,1305:0,101,255:40,0 chr1 50661449 . A . PASS END=50661458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 50663101 . G . PASS END=50663139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,175,255:40,0 chr1 50666481 . A . PASS END=50666485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 50666486 . T . PASS END=50666503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 50666504 . C . PASS END=50666514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 50666515 . C T, 83.11 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,9,0:0,3,0:33:121,36,0,450,36,450:255,36,0:0,0:8.3113e+01,3.3113e+01,2.1219e-03,4.4853e+02,6.7883e+01,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,5:0,0,8,4 chr1 50666516 . C . PASS END=50666521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 50666522 . G . PASS END=50666522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 50666523 . G . PASS END=50666526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 50666527 . T . PASS END=50666527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 50666528 . C . PASS END=50666535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 50666536 . A . PASS END=50666539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 50666540 . T . PASS END=50666540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr1 50666541 . T . PASS END=50666552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr1 50666553 . A . PASS END=50666587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,645:0,51,255:19,0 chr1 50666588 . G . PASS END=50666630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,787:0,66,255:26,0 chr1 50666631 . C . PASS END=50666633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 50666634 . T . PASS END=50666635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 50666636 . A . PASS END=50666647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1019:0,87,255:30,0 chr1 50666648 . G . PASS END=50666648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 50666649 . G . PASS END=50666678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:30,0 chr1 50666679 . C . PASS END=50666717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,862:0,61,255:26,0 chr1 50666718 . C . PASS END=50666719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 50666720 . A . PASS END=50666721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 50666722 . G . PASS END=50666723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 50666724 . A . PASS END=50666724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 50666725 . T . PASS END=50666726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 50666727 . C . PASS END=50666761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,931:0,64,255:26,0 chr1 50666762 . C . PASS END=50666762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 50666763 . C . PASS END=50666765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 50666766 . G . PASS END=50666800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr1 50666801 . A . PASS END=50666811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 50666812 . C . PASS END=50666812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 50666813 . A . PASS END=50666818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 50666819 . C . PASS END=50666819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 50666820 . C . PASS END=50666834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 50666835 . A . PASS END=50666835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 50666836 . G . PASS END=50666837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 50666838 . C . PASS END=50666838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:9,0 chr1 50666839 . C . PASS END=50666850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:11,0 chr1 50884337 . C . PASS END=50884341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 50884342 . G . PASS END=50884342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 50884343 . C . PASS END=50884346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 50884347 . T . PASS END=50884347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 50884348 . C . PASS END=50884360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 50884361 . G . PASS END=50884361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 50884362 . A . PASS END=50884365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 50884366 . T . PASS END=50884368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 50884369 . G . PASS END=50884369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 50884370 . C . PASS END=50884372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 50884373 . G . PASS END=50884373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 50884374 . T . PASS END=50884374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 50884375 . A . PASS END=50884389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 50884390 . A . PASS END=50884390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 50884391 . G . PASS END=50884391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 50884392 . G . PASS END=50884392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 50884393 . T . PASS END=50884409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:18,0 chr1 50884410 . G . PASS END=50884410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,491:0,34,255:15,0 chr1 50884411 . C . PASS END=50884424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,568:0,51,255:17,0 chr1 50884425 . G . PASS END=50884425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 50884426 . C . PASS END=50884493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:17,0 chr1 50884494 . A . PASS END=50884494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 50884495 . A . PASS END=50884503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 50884504 . T . PASS END=50884520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,426:0,33,255:11,0 chr1 50884521 . A . PASS END=50884529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 50884530 . C . PASS END=50884553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,210:6,0 chr1 50884554 . G . PASS END=50884557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 50884558 . A . PASS END=50884559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 50884560 . G . PASS END=50884560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 50884561 . C . PASS END=50884561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 50884562 . C . PASS END=50884598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 50884599 . G . PASS END=50884604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 50884605 . G . PASS END=50884628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 50884629 . C . PASS END=50884629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 50884630 . T . PASS END=50884634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 50884635 . T . PASS END=50884652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,202:6,0 chr1 50884653 . A . LowGQ END=50884653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,111:13,0,123:4,0 chr1 50884654 . A . PASS END=50884657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr1 50884658 . C . PASS END=50884658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 50884659 . G . PASS END=50884700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,111:0,12,111:6,0 chr1 50884701 . C . PASS END=50884740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 50884741 . C . PASS END=50884777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,55:3,0 chr1 50884778 . G A, 38.54 PASS DP=3;MQ=212.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:7:75,9,0,75,9,75:94,9,0:0,0:3.8536e+01,6.6239e+00,1.0668e+00,7.3306e+01,4.1394e+01,7.6306e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,1:0,0,0,3 chr1 50884779 . G . LowGQ END=50884815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,39:0,0,46:3,0 chr1 50884816 . G . PASS END=50884818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 50884819 . A . LowGQ END=50884819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 50884820 . C . PASS END=50884821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 50884822 . C . LowGQ END=50884822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 50884823 . G . PASS END=50884876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,94:0,12,94:6,0 chr1 50884877 . G . PASS END=50884980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:9,0 chr1 50884981 . G . PASS END=50885009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr1 50885010 . A . PASS END=50885020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 50885021 . C . PASS END=50885033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 50885034 . G . PASS END=50885069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,266:0,24,255:9,0 chr1 50885070 . G . PASS END=50885070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 50885071 . C . PASS END=50885071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 50885072 . C . PASS END=50885139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr1 50885140 . C . PASS END=50885140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 50885141 . C . PASS END=50885141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 50885142 . T . PASS END=50885142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 50885143 . C . PASS END=50885152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:10,0 chr1 50885153 . G . PASS END=50885153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 50885154 . C . PASS END=50885161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 50885162 . G . PASS END=50885162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 50885163 . C . PASS END=50885178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 50885179 . A . PASS END=50885179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 50885180 . G . PASS END=50885194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:12,0 chr1 50885195 . T . PASS END=50885195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 50885196 . T . PASS END=50885206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,405:0,36,255:12,0 chr1 50885207 . A . PASS END=50885208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 50885209 . C . PASS END=50885209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 50885210 . T . PASS END=50885210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:12,0 chr1 50885211 . A . PASS END=50885219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 50885220 . C . PASS END=50885220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 50885221 . C . PASS END=50885241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,596:0,48,255:18,0 chr1 50885242 . C . PASS END=50885242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 50885243 . G . PASS END=50885266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,652:0,54,255:18,0 chr1 50885267 . C . PASS END=50885283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:13:0,34,482:0,34,255:13,0 chr1 50885284 . T . PASS END=50885309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 50885310 . G . PASS END=50885310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 50885311 . G . PASS END=50885315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 50885316 . A . PASS END=50885316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:13,0 chr1 50885317 . A . PASS END=50885321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 50885322 . T . PASS END=50885322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 50885323 . T . PASS END=50885336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:15,0 chr1 50885337 . A . PASS END=50885337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,435:0,15,255:13,0 chr1 50885338 . G . PASS END=50885351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:15,0 chr1 50885352 . C . PASS END=50885352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 50885353 . G . PASS END=50885353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 50885354 . G . PASS END=50885355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 50885356 . C . PASS END=50885359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 50885360 . C . PASS END=50885360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 50885361 . T . PASS END=50885362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 50885363 . C . PASS END=50885363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 50885364 . A . PASS END=50885366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 50885367 . A . PASS END=50885370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 50885371 . T . PASS END=50885371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,425:0,25,255:12,0 chr1 50885372 . C . PASS END=50885373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 50885374 . T . PASS END=50885374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 50885375 . A . PASS END=50885383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 50885384 . G . PASS END=50885384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 50885385 . T . PASS END=50885390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 50885391 . T . PASS END=50885391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 50885392 . T . PASS END=50885406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,411:0,36,255:12,0 chr1 50886650 . C . PASS END=50886656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 50886657 . C . PASS END=50886657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 50886658 . C . PASS END=50886700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:19,0 chr1 50886701 . C . PASS END=50886701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 50886702 . T . PASS END=50886747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,598:0,43,255:19,0 chr1 50886748 . T . PASS END=50886748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 50886749 . A . PASS END=50886751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 50886752 . C . PASS END=50886752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 50886753 . G . PASS END=50886755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr1 50886756 . C . PASS END=50886756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 50886757 . C . PASS END=50886780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:16,0 chr1 50886781 . G . PASS END=50886781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 50886782 . C . PASS END=50886782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 50886783 . G . PASS END=50886788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 50886789 . C . PASS END=50886789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 50886790 . G . PASS END=50886813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 50886814 . A . PASS END=50886817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 50886818 . G . PASS END=50886825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 50886826 . T . PASS END=50886826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 50886827 . C . PASS END=50886837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 50886838 . T . PASS END=50886838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 50886839 . T . PASS END=50886839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 50886840 . C . PASS END=50886840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 50886841 . T . PASS END=50886842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 50886843 . C . PASS END=50886843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 50886844 . T . PASS END=50886870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 50886871 . A . PASS END=50886893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:20:9:0,20,315:0,20,255:9,0 chr1 50886894 . G . PASS END=50886905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 50886906 . G . PASS END=50886940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,225:0,21,225:8,0 chr1 50886941 . G . PASS END=50886951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 50886952 . T . PASS END=50887056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 50887057 . A . PASS END=50887091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 50887092 . A . PASS END=50887092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 50887093 . G . PASS END=50887093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 50887094 . C T, 0.04 DRAGENSnpHardQUAL DP=8;MQ=246.12;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:1,1,0:6,0,0:20:15,0,50,36,242,278:15,0,201:7,0:4.2634e-02,2.0103e+01,7.3103e+01,5.5878e+01,2.9713e+02,3.0113e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,0,1:4,3,0,1 chr1 50887095 . G . PASS END=50887108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,227:0,24,227:8,0 chr1 50887109 . C . PASS END=50887111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 50887112 . C . PASS END=50887126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 50887127 . A . PASS END=50887131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 50887132 . A . PASS END=50887146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:4,0 chr1 50887147 . G . PASS END=50887208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 50907112 . T . PASS END=50907195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:61:0,120,1800:0,139,255:40,1 chr1 50917758 . C . PASS END=50917845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,91,255:38,0 chr1 50917846 . A . PASS END=50917846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 50917847 . T . PASS END=50917847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:22,0 chr1 50917848 . C . PASS END=50917865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:23,0 chr1 50941136 . G . PASS END=50941136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 50941137 . T . PASS END=50941138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 50941139 . T . PASS END=50941139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr1 50941140 . C . PASS END=50941156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 50941157 . C . PASS END=50941255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:29:0,85,1102:0,85,255:40,0 chr1 50941256 . G . PASS END=50941256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:36,0 chr1 50941257 . C . PASS END=50941278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,104,1421:0,104,255:38,0 chr1 50941279 . G . PASS END=50941279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 50941280 . T . PASS END=50941301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1316:0,81,255:38,0 chr1 50941302 . T . PASS END=50941302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1261:0,65,255:30,0 chr1 50941303 . C . PASS END=50941308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1350:0,111,255:32,0 chr1 50941309 . T . PASS END=50941309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1211:0,56,255:29,0 chr1 50941310 . T . PASS END=50941322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:29,0 chr1 50941323 . A . PASS END=50941346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:25,0 chr1 50941347 . A . PASS END=50941348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr1 50941349 . G . PASS END=50941351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,69,255:16,0 chr1 50956260 . C . PASS END=50956263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 50956264 . C . PASS END=50956337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,3:64:99:58:0,120,1800:0,134,255:40,0 chr1 50957393 . C . PASS END=50957405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1280:0,102,255:37,0 chr1 50957406 . G . PASS END=50957406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr1 50957407 . C . PASS END=50957432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:36:0,94,1293:0,94,255:37,0 chr1 50957433 . T . PASS END=50957433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1299:0,67,255:35,0 chr1 50957434 . C . PASS END=50957440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,105,1575:0,114,255:36,0 chr1 50957441 . T . PASS END=50957441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1228:0,72,255:35,0 chr1 50957442 . C . PASS END=50957459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1135:0,85,255:34,0 chr1 50957460 . G . PASS END=50957460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr1 50957461 . C . PASS END=50957471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 50957472 . T . PASS END=50957473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 51001041 . C . PASS END=51001129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:42:0,110,1527:0,110,255:40,0 chr1 51005264 . C . PASS END=51005396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:38:0,84,1260:0,114,255:40,2 chr1 51005397 . A . PASS END=51005400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,94,255:26,0 chr1 51032749 . C . PASS END=51032903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:52:0,120,1800:0,156,255:40,0 chr1 51048290 . A . PASS END=51048371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:58:0,120,1800:0,164,255:40,0 chr1 51049324 . C . PASS END=51049387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:78:0,120,1800:0,218,255:40,0 chr1 51050357 . T . PASS END=51050472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:33:0,81,1215:0,99,255:40,0 chr1 51050473 . T . PASS END=51050483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:25,0 chr1 51061793 . T . PASS END=51061868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:32:0,87,1173:0,88,255:40,0 chr1 51061869 . C . PASS END=51061869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 51061870 . C . PASS END=51061874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 51061875 . T . PASS END=51061888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,71,255:26,0 chr1 51121114 . T . PASS END=51121160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:36:0,88,1324:0,88,255:40,0 chr1 51121161 . G . PASS END=51121182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:36,0 chr1 51121183 . A . PASS END=51121197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:26,0 chr1 51121198 . T C, 45.69 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=1.613;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,9,0:0.360,0.000:25:7,5,0:9,4,0:45:80,0,50,322,572,894:255,0,255:14,0:4.5688e+01,1.3901e-04,5.3000e+01,3.2191e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,2,7:7,9,4,5 chr1 51121199 . A . PASS END=51121200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 51171458 . C . PASS END=51171463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:28,0 chr1 51171464 . A . PASS END=51171465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1111:0,87,255:32,0 chr1 51171466 . T . PASS END=51171466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 51171467 . A . PASS END=51171563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:32:0,85,1051:0,85,255:40,0 chr1 51204535 . C . PASS END=51204626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:39:0,104,1449:0,104,255:40,0 chr1 51210356 . A . PASS END=51210447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,153,255:40,0 chr1 51246529 . C . PASS END=51246568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,114,1474:0,120,255:40,0 chr1 51253672 . C . PASS END=51253674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:18,0 chr1 51253675 . C . PASS END=51253676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 51253677 . G . PASS END=51253863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1025:0,84,255:40,0 chr1 51253864 . C . PASS END=51253875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:23,0 chr1 51253876 . C . PASS END=51253877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 51267303 . C . PASS END=51267349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:78:0,120,1800:0,221,255:40,0 chr1 51323601 . C . PASS END=51323669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,132,255:40,0 chr1 51328534 . A . PASS END=51328554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,150,255:40,0 chr1 51425439 . C . PASS END=51425439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 51425440 . T . PASS END=51425455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,931:0,62,255:27,0 chr1 51425456 . T . PASS END=51425457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr1 51425458 . A . PASS END=51425459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,915:0,67,255:26,0 chr1 51425460 . C . PASS END=51425462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 51425463 . C . PASS END=51425466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 51425467 . T . PASS END=51425468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 51425469 . C . PASS END=51425469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 51425470 . A . PASS END=51425483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:16:0,45,675:0,48,255:18,0 chr1 51436041 . A . PASS END=51436169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:41:0,97,1612:0,97,255:40,0 chr1 51439565 . G . PASS END=51439572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 51439573 . A . PASS END=51439573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 51439574 . C . PASS END=51439586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1133:0,80,255:29,0 chr1 51439587 . A . PASS END=51439587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 51439588 . G . PASS END=51439836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:30:0,81,1114:0,83,255:40,0 chr1 51439837 . C . PASS END=51439839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 51439840 . T . PASS END=51439843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 51439844 . G . PASS END=51439859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,917:0,68,255:26,0 chr1 51439860 . A . PASS END=51439860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 51439861 . T . PASS END=51439861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 51439862 . T . PASS END=51439862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:23,0 chr1 51439863 . T . PASS END=51439887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,770:0,63,255:25,0 chr1 51439888 . G . PASS END=51439907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,49,255:19,0 chr1 51439908 . C . PASS END=51439921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:13:0,31,535:0,31,255:13,0 chr1 51439922 . G . PASS END=51439922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:10,0 chr1 51439923 . G . PASS END=51439932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 51439933 . T . PASS END=51439933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 51439934 . C . PASS END=51439942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,391:0,36,255:13,0 chr1 51567861 . A . PASS END=51567892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,105,1369:0,108,255:40,0 chr1 51567893 . A . PASS END=51567921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,109,1782:0,109,255:40,0 chr1 51568051 . A . PASS END=51568054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,209,255:40,0 chr1 51578132 . A . PASS END=51578241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:53:0,120,1800:0,132,255:40,0 chr1 51584338 . A . PASS END=51584473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:51:0,120,1729:0,120,255:40,0 chr1 51611396 . G . PASS END=51611432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,164,255:40,0 chr1 51613139 . C . PASS END=51613428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:40:0,93,1395:0,113,255:40,0 chr1 51613429 . A . PASS END=51613443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:31:0,69,1035:0,77,255:25,0 chr1 51617711 . G . PASS END=51617713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 51617714 . A . PASS END=51617714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 51617715 . C . PASS END=51617715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 51617716 . A . PASS END=51617716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 51617717 . A . PASS END=51617721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 51702429 . A . PASS END=51702437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1103:0,96,255:32,0 chr1 51702438 . T . PASS END=51702438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr1 51702439 . G . PASS END=51702495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1193:0,86,255:36,0 chr1 51702496 . G . PASS END=51702496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:26,0 chr1 51702497 . G . PASS END=51702499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 51702500 . T . PASS END=51702501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 51702502 . G . PASS END=51702504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 51702505 . T . PASS END=51702524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 51702525 . G . PASS END=51702530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr1 51702531 . G . PASS END=51702532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 51702533 . G . PASS END=51702533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 51702534 . C . PASS END=51702542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 51702543 . C . PASS END=51702543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 51702544 . C . PASS END=51702547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 51702548 . T . PASS END=51702551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 51735628 . G . PASS END=51735639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 51735640 . G . PASS END=51735640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:29,0 chr1 51735641 . T . PASS END=51735643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 51735644 . C . PASS END=51735644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1143:0,68,255:29,0 chr1 51735645 . A . PASS END=51735772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:33:0,90,1303:0,97,255:40,0 chr1 51735773 . A . PASS END=51735773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1050:0,58,255:29,0 chr1 51735774 . T . PASS END=51735779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 51735780 . A . PASS END=51735780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 51735781 . G . PASS END=51735786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 51735787 . A . PASS END=51735787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 51735788 . A . PASS END=51735791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 51735792 . C . PASS END=51735797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 51736823 . G . PASS END=51736943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:29:0,81,1078:0,87,255:37,0 chr1 51736944 . T . PASS END=51736944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 51736945 . G . PASS END=51736950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 51736951 . A . PASS END=51736980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 51736981 . A . PASS END=51736981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 51736982 . T . PASS END=51736987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 51736988 . T . PASS END=51736994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,765:0,50,255:18,0 chr1 51753829 . C . PASS END=51753836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 51753837 . A . PASS END=51753841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr1 51753842 . G . PASS END=51753842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 51753843 . A . PASS END=51753847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 51753848 . A . PASS END=51753848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 51753849 . C . PASS END=51753853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1181:0,99,255:33,0 chr1 51753854 . G . PASS END=51753854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:33,0 chr1 51753855 . A . PASS END=51753879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1127:0,85,255:34,0 chr1 51753880 . C . PASS END=51753880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:32,0 chr1 51753881 . T . PASS END=51753881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 51753882 . T . PASS END=51753882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:30,0 chr1 51753883 . G . PASS END=51753906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1127:0,83,255:34,0 chr1 51753907 . T . PASS END=51753907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1139:0,66,255:31,0 chr1 51753908 . C . PASS END=51753910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:31,0 chr1 51753911 . A . PASS END=51753911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:30,0 chr1 51753912 . A . PASS END=51753913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 51753914 . T . PASS END=51753914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 51753915 . G . PASS END=51753915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 51753916 . T . PASS END=51753916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:28,0 chr1 51753917 . G . PASS END=51753922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:29,0 chr1 51753923 . G . PASS END=51753934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:26,0 chr1 51753935 . T . PASS END=51753935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:20,0 chr1 51753936 . A . PASS END=51753952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,909:0,75,255:25,0 chr1 51754511 . T . PASS END=51754627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:92:40:0,92,1395:0,92,255:40,0 chr1 51755677 . T . PASS END=51755778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:33:0,84,1120:0,88,255:40,0 chr1 51755779 . G . PASS END=51755791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,80,255:26,0 chr1 51756186 . C . PASS END=51756205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,970:0,78,255:26,0 chr1 51756206 . T . PASS END=51756297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1186:0,81,255:40,0 chr1 51760063 . C . PASS END=51760183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1215:0,99,255:40,0 chr1 51761720 . C . PASS END=51761842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,155,255:40,0 chr1 51767244 . C . PASS END=51767249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 51767250 . C . PASS END=51767250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 51767251 . C . PASS END=51767314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:33:0,88,1195:0,88,255:40,0 chr1 51767315 . T . PASS END=51767351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,105,1543:0,110,255:40,0 chr1 51767352 . G A, 47.52 PASS DP=41;MQ=250.00;MQRankSum=5.385;ReadPosRankSum=3.056;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,17,0:0.415,0.000:41:13,9,0:11,8,0:46:82,0,50,600,844,1445:255,0,255:20,0:4.7519e+01,9.8627e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,13,8,9:16,8,10,7 chr1 51767353 . A . PASS END=51767374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,99,255:37,0 chr1 51767375 . C . PASS END=51767387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,83,255:26,0 chr1 51767388 . C . PASS END=51767392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 51767393 . A . PASS END=51767393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1013:0,71,255:27,0 chr1 51767394 . A . PASS END=51767401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 51767402 . T . PASS END=51767405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 51767753 . T . PASS END=51767765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1067:0,96,255:32,0 chr1 51767766 . T . PASS END=51767766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1107:0,66,255:29,0 chr1 51767767 . C . PASS END=51767775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:36,0 chr1 51767776 . T . PASS END=51767776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1208:0,61,255:33,0 chr1 51767777 . C . PASS END=51767799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:37:0,83,1268:0,83,255:40,0 chr1 51767800 . A . PASS END=51767800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1322:0,78,255:39,0 chr1 51767801 . T . PASS END=51767829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1512:0,110,255:40,0 chr1 51767830 . A . PASS END=51767830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:43:42:0,43,1164:0,43,255:34,0 chr1 51767831 . T . PASS END=51767831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1349:0,76,255:35,0 chr1 51767832 . G . PASS END=51767861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:88:35:0,88,1168:0,88,255:35,0 chr1 51767862 . T . PASS END=51767869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:32,0 chr1 51767870 . A . PASS END=51767870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1080:0,47,255:27,0 chr1 51767871 . A . PASS END=51767873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 51767874 . G . PASS END=51767883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,945:0,76,255:22,0 chr1 51767884 . C . PASS END=51767884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:21,0 chr1 51767885 . C . PASS END=51767889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 51767890 . C . PASS END=51767890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:21,0 chr1 51767891 . T . PASS END=51767891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 51767892 . C . PASS END=51767892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:21,0 chr1 51767893 . T . PASS END=51767897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 51767898 . T . PASS END=51767901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,752:0,52,255:19,0 chr1 51767902 . T . PASS END=51767902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:24:0,36,540:0,72,255:12,0 chr1 51767903 . T . PASS END=51767903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:21:24:0,21,315:0,72,255:7,0 chr1 51767904 . C . PASS END=51767912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:18:22:0,18,270:0,27,255:6,1 chr1 51767913 . C . LowGQ END=51767929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:15:0,0,116:24,0,252:10,1 chr1 51767930 . G . PASS END=51767930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,490:0,21,255:9,0 chr1 51767931 . T . LowGQ END=51767952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:15:0,0,100:0,0,255:13,0 chr1 51767953 . C . PASS END=51767953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 51767954 . A . LowGQ END=51767954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,421:22,0,255:13,0 chr1 51767955 . C . PASS END=51767955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr1 51767956 . A . LowGQ END=51767956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,418:32,0,255:13,0 chr1 51767957 . T . PASS END=51767957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr1 51767958 . G . PASS END=51767958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 51767959 . T . LowGQ END=51767959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:4,0,255:15,0 chr1 51767960 . G . PASS END=51767960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 51767961 . C . LowGQ END=51767961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,467:19,0,255:15,0 chr1 51767962 . C . PASS END=51767962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 51767963 . T . PASS END=51767964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,518:0,12,255:15,0 chr1 51767965 . A . LowGQ END=51767965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:16,0 chr1 51767966 . C . PASS END=51767966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 51767967 . T . PASS END=51767968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:21:18:0,21,557:0,21,255:16,0 chr1 51767969 . C . PASS END=51767969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 51767970 . C . PASS END=51767970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 51767971 . T . PASS END=51767971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 51767972 . G . PASS END=51767972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 51767973 . C . PASS END=51767973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,551:0,7,255:16,0 chr1 51767974 . T . PASS END=51767974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 51767975 . G . PASS END=51767975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 51767976 . G . PASS END=51767976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 51767977 . T . PASS END=51767977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 51767978 . C . PASS END=51767978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 51767979 . T . PASS END=51767979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 51767980 . G . PASS END=51767982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 51767983 . A . PASS END=51767983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr1 51767984 . G . PASS END=51767984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 51767985 . A . PASS END=51767985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:21,0 chr1 51767986 . C . PASS END=51767986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 51767987 . C . PASS END=51767987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:23,0 chr1 51767988 . C . PASS END=51767988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,770:0,20,255:22,0 chr1 51767989 . C . PASS END=51767989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 51767990 . G . PASS END=51767990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 51767991 . A . PASS END=51767991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 51767992 . G . PASS END=51767992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 51767993 . G . PASS END=51767993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 51767994 . G . PASS END=51767994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 51767995 . A . PASS END=51767996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:21,0 chr1 51767997 . C . PASS END=51767997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr1 51767998 . C . PASS END=51768007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:26,0 chr1 51768008 . G . PASS END=51768020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:31,0 chr1 51768021 . T . PASS END=51768021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:29,0 chr1 51768022 . C . PASS END=51768022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 51768023 . A . PASS END=51768023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 51768024 . C . PASS END=51768028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:32,0 chr1 51768029 . T . PASS END=51768029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1025:0,63,255:30,0 chr1 51768030 . G . PASS END=51768033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1136:0,85,255:35,0 chr1 51768034 . C . PASS END=51768070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:35:0,88,1174:0,88,255:40,0 chr1 51768071 . G T, 46.38 PASS DP=41;MQ=250.00;MQRankSum=5.287;ReadPosRankSum=3.244;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,16,0:0.400,0.000:40:11,6,0:13,10,0:46:81,0,50,544,850,1394:255,0,255:23,0:4.6382e+01,1.2167e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,8,8:16,8,10,6 chr1 51768072 . A . PASS END=51768088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:40:0,93,1393:0,93,255:40,0 chr1 51768178 . C . PASS END=51768229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:41:0,98,1378:0,98,255:40,0 chr1 51768230 . T . PASS END=51768230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1188:0,73,255:37,0 chr1 51768231 . T . PASS END=51768245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,120,1498:0,120,255:40,0 chr1 51768756 . C . PASS END=51768763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 51768764 . A . PASS END=51768765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,683:0,49,255:21,0 chr1 51768766 . G . PASS END=51768795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,872:0,65,255:26,0 chr1 51768796 . C . PASS END=51768796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 51768797 . A . PASS END=51768804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,931:0,68,255:26,0 chr1 51768805 . G . PASS END=51768806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 51768807 . G . PASS END=51768807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 51768808 . C . PASS END=51768809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:28,0 chr1 51768810 . C . PASS END=51768827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,850:0,67,255:26,0 chr1 51768828 . C . PASS END=51768828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,780:0,58,255:23,0 chr1 51768829 . T . PASS END=51768829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 51768830 . G . PASS END=51768830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 51768831 . A . PASS END=51768838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 51768839 . T . PASS END=51768839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:19,0 chr1 51768840 . C . PASS END=51768841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 51768842 . T . PASS END=51768842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 51768843 . C . PASS END=51768844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 51768845 . A . PASS END=51768846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:40:24:0,40,570:0,40,255:22,0 chr1 51768847 . C . PASS END=51768847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 51768848 . T . PASS END=51768849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 51768850 . C . PASS END=51768851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 51768852 . G . PASS END=51768852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:20,0 chr1 51768853 . C . PASS END=51768854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 51768855 . G . PASS END=51768855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:19,0 chr1 51768856 . C . PASS END=51768857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 51768858 . C . PASS END=51768858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:19,0 chr1 51768859 . A . PASS END=51768859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 51768860 . T . PASS END=51768864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,597:0,47,255:18,0 chr1 51770753 . C . PASS END=51770803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:39:0,87,1305:0,107,255:40,0 chr1 51770804 . A . PASS END=51770818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:27:0,69,1035:0,81,255:26,0 chr1 51771649 . C . PASS END=51771748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:37:0,87,1313:0,87,255:40,0 chr1 51774933 . T . PASS END=51775043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:34:0,82,1207:0,82,255:40,0 chr1 51775044 . C . PASS END=51775046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 51775047 . G . PASS END=51775055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 51775056 . G . PASS END=51775065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:26,0 chr1 51775066 . A . PASS END=51775073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:24:0,54,810:0,72,255:19,0 chr1 51775074 . G . PASS END=51775074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 51775075 . G . PASS END=51775102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,590:0,47,255:18,0 chr1 51776926 . C . PASS END=51776927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 51776928 . G . PASS END=51776953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 51776954 . A . PASS END=51776954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 51776955 . G . PASS END=51776955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 51776956 . C . PASS END=51776967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr1 51776968 . A . PASS END=51776968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 51776969 . T . PASS END=51776981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:18,0 chr1 51776982 . C . PASS END=51776982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 51776983 . G . PASS END=51776993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 51777791 . C . PASS END=51777791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 51777792 . T . PASS END=51777796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 51777797 . T . PASS END=51777797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 51777798 . G . PASS END=51777798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 51777799 . A . PASS END=51777799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 51777800 . A . PASS END=51777808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 51777809 . G . PASS END=51777816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 51777817 . C . PASS END=51777820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 51777821 . T . PASS END=51777835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 51777836 . A . PASS END=51777836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 51777837 . G . PASS END=51777862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 51777863 . G . PASS END=51777863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 51777864 . G . PASS END=51777867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 51778484 . C . PASS END=51778615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,100,1343:0,100,255:40,0 chr1 51787393 . C . PASS END=51787404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:30,0 chr1 51787405 . T . PASS END=51787435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1073:0,82,255:33,0 chr1 51787436 . G . PASS END=51787436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 51787437 . G . PASS END=51787449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:31,0 chr1 51787450 . G . PASS END=51787452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 51787453 . G . PASS END=51787461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,88,255:29,0 chr1 51787462 . T . PASS END=51787473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 51787474 . T . PASS END=51787474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:25,0 chr1 51787475 . C . PASS END=51787485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 51787486 . C . PASS END=51787490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 51787491 . A . PASS END=51787497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 51787671 . C . PASS END=51787671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 51787672 . T . PASS END=51787680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 51787681 . T . PASS END=51787681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 51787682 . C . PASS END=51787698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,523:0,48,255:17,0 chr1 51787699 . G . PASS END=51787700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 51787701 . G . PASS END=51787701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 51787702 . C . LowGQ END=51787702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,682:11,0,255:20,0 chr1 51787703 . A . PASS END=51787708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,717:0,66,255:22,0 chr1 51787709 . G . PASS END=51787709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr1 51787710 . A . PASS END=51787716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,809:0,69,255:23,0 chr1 51787717 . T . PASS END=51787717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 51787790 . C . PASS END=51787810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 51787811 . T . PASS END=51787811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 51787812 . C . PASS END=51787812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 51787813 . T . PASS END=51787813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:14,0 chr1 51787814 . T . PASS END=51787815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 51787816 . G . PASS END=51787823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 51787824 . T . PASS END=51787824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 51787825 . C . PASS END=51787833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,480:0,39,255:13,0 chr1 51796109 . C . LowDepth END=51796149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:2,0 chr1 51796826 . C . PASS END=51796857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,147,255:40,0 chr1 51808679 . A . PASS END=51808685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 51808686 . A . PASS END=51808686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr1 51808687 . C . PASS END=51808741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,729:0,60,255:25,0 chr1 51808742 . G . PASS END=51808750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 51810663 . C . PASS END=51810669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 51810670 . C . PASS END=51810675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 51810676 . T . PASS END=51810676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 51810677 . C . PASS END=51810677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:19,0 chr1 51810678 . C . PASS END=51810679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 51810680 . G . PASS END=51810680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 51810681 . G . PASS END=51810682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 51810683 . G . PASS END=51810684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 51810685 . C . PASS END=51810685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:18,0 chr1 51810686 . C . PASS END=51810687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 51810688 . C . PASS END=51810688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr1 51810689 . C . PASS END=51810702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:18,0 chr1 51810703 . T . PASS END=51810703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 51810704 . C . PASS END=51810706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 51810707 . A . LowGQ END=51810707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,471:13,0,255:13,0 chr1 51810708 . A . PASS END=51810713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:11,0 chr1 51810714 . A . PASS END=51810714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr1 51810715 . T . PASS END=51810715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 51822372 . T . PASS END=51822372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1176:0,83,255:32,0 chr1 51822373 . C . PASS END=51822373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1108:0,49,255:30,0 chr1 51822374 . A . PASS END=51822501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1157:0,82,255:40,0 chr1 51822502 . T . PASS END=51822502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:28,0 chr1 51822503 . C . PASS END=51822507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 51822508 . T . PASS END=51822511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:24,0 chr1 51822512 . A . PASS END=51822518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:27:0,54,810:0,81,255:19,0 chr1 51826843 . A . PASS END=51826883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1388:0,98,255:40,0 chr1 51826884 . T . PASS END=51826920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,144,255:40,0 chr1 51826921 . T C, 217.17 PASS DP=57;MQ=249.78;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,27,0:0,30,0:167:255,170,0,2104,170,2104:255,171,0:0,0:2.1717e+02,1.6717e+02,0.0000e+00,4.5000e+02,2.0194e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,25:0,0,30,27 chr1 51826922 . A . PASS END=51826958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,135,255:40,0 chr1 51826959 . G . PASS END=51827023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:34:0,84,1203:0,86,255:40,0 chr1 51827024 . T . PASS END=51827024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:29,0 chr1 51827025 . T . PASS END=51827025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 51827026 . C . PASS END=51827026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:27,0 chr1 51827027 . C . PASS END=51827027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1231:0,86,255:29,0 chr1 51829538 . C . PASS END=51829700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:38:0,81,1465:0,81,255:40,0 chr1 51831625 . C . PASS END=51831701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,188,255:40,0 chr1 51860053 . C . PASS END=51860119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,174,255:40,0 chr1 51864704 . C . PASS END=51864704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 51864705 . G . PASS END=51864705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 51864706 . A . PASS END=51864712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr1 51864713 . A . PASS END=51864713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 51864714 . C . PASS END=51864723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,903:0,62,255:26,0 chr1 51864724 . T . PASS END=51864726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 51864727 . C . PASS END=51864727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 51864728 . T . PASS END=51864822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1149:0,84,255:40,0 chr1 51864823 . C . PASS END=51864837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:26:0,75,1125:0,78,255:26,0 chr1 51866590 . C . PASS END=51866625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,228,255:40,0 chr1 51868107 . T . PASS END=51868197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:38:0,97,1327:0,97,255:40,0 chr1 51869091 . C . PASS END=51869204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:41:0,110,1543:0,110,255:40,0 chr1 51871577 . T . PASS END=51871780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:33:0,82,1157:0,82,255:40,0 chr1 51873807 . T . PASS END=51873913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:31:0,93,1103:0,93,255:40,0 chr1 51873914 . G . PASS END=51873950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,120,1800:0,122,255:40,0 chr1 51873951 . G A, 184.99 PASS DP=47;MQ=250.00;FractionInformativeReads=0.979 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,22,0:0,24,0:135:223,138,0,1746,138,1746:255,141,0:0,0:1.8499e+02,1.3499e+02,0.0000e+00,4.5000e+02,1.6976e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,30:0,0,26,20 chr1 51873952 . T . PASS END=51873988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1260:0,92,255:40,0 chr1 51873989 . C . PASS END=51873994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:29,0 chr1 51873995 . G . PASS END=51873999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 51874000 . G . PASS END=51874004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:54:30:0,54,810:0,90,255:19,0 chr1 51875207 . C . PASS END=51875365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:84:35:0,84,1260:0,91,255:40,0 chr1 51875366 . A . PASS END=51875366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr1 51875367 . T . PASS END=51875368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 51887458 . C . PASS END=51887623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:87:37:0,87,1305:0,98,255:40,0 chr1 51887624 . T . PASS END=51887628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,95,255:26,0 chr1 51906019 . C . PASS END=51906104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:58:0,120,1800:0,172,255:40,0 chr1 51910561 . C . PASS END=51910561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1117:0,60,255:31,0 chr1 51910562 . T . PASS END=51910562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 51910563 . T . PASS END=51910564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1127:0,63,255:32,0 chr1 51910565 . T . PASS END=51910565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:32,0 chr1 51910566 . G . PASS END=51910566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1137:0,66,255:31,0 chr1 51910567 . T . PASS END=51910717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:88:33:0,88,1039:0,88,255:40,0 chr1 51912632 . C . PASS END=51912777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:49:0,104,1620:0,104,255:40,0 chr1 51913607 . C . PASS END=51913623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1111:0,82,255:36,0 chr1 51913624 . T . PASS END=51913657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,101,1329:0,101,255:40,0 chr1 51913658 . G . PASS END=51913694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,120,1800:0,132,255:40,0 chr1 51913695 . C T, 48.92 PASS DP=72;MQ=250.00;MQRankSum=7.247;ReadPosRankSum=2.272;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,32,0:0.444,0.000:72:22,16,0:18,16,0:47:84,0,50,1142,1431,2573:255,0,255:37,0:4.8925e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,25,18,14:15,25,20,12 chr1 51913696 . G . PASS END=51913732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:71:0,120,1800:0,142,255:40,0 chr1 51913733 . T . PASS END=51913807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:40:0,114,1424:0,115,255:40,0 chr1 51926763 . A . PASS END=51926822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:72:0,120,1800:0,199,255:40,0 chr1 51929345 . T . PASS END=51929459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:38:0,84,1260:0,110,255:40,0 chr1 51929460 . T . PASS END=51929461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:42:0,81,1215:0,126,255:29,0 chr1 51929462 . A . PASS END=51929470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:63:39:0,63,945:0,92,255:25,0 chr1 51930933 . T . PASS END=51930998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:48:0,120,1800:0,131,255:40,0 chr1 51934145 . A . PASS END=51934150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 51934151 . T . PASS END=51934240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1143:0,87,255:40,0 chr1 51937362 . T . PASS END=51937409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,168,255:40,0 chr1 51938531 . C . PASS END=51938601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,133,255:40,0 chr1 51938602 . C . PASS END=51938620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,134,255:40,0 chr1 51946945 . C . PASS END=51946986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:95:0,120,1800:0,255,255:40,0 chr1 51984871 . C . PASS END=51984871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 51984872 . T . PASS END=51984872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 51984873 . G . PASS END=51984873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr1 51984874 . T . PASS END=51984877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 51984878 . A . PASS END=51984879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr1 51984880 . A . PASS END=51984883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 51984884 . A . PASS END=51984884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,644:0,55,255:21,0 chr1 51984885 . G . PASS END=51984897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,805:0,75,255:25,0 chr1 51984898 . A . PASS END=51984898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 51984899 . G . PASS END=51984899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 51984900 . C . PASS END=51984900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 51984901 . C . PASS END=51984901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 51984902 . A . PASS END=51984902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,759:0,25,255:21,0 chr1 51984903 . T . PASS END=51984903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 52082764 . G . PASS END=52082776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:25,0 chr1 52082777 . C . PASS END=52082780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr1 52082781 . A . PASS END=52082782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,955:0,67,255:28,0 chr1 52082783 . A . PASS END=52082783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1034:0,93,255:31,0 chr1 52082784 . T . PASS END=52082784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 52082785 . G . PASS END=52082805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1141:0,83,255:34,0 chr1 52082806 . G . PASS END=52082806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 52082807 . C . PASS END=52082878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1182:0,88,255:39,0 chr1 52082879 . C . PASS END=52082893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:28:0,74,995:0,74,255:26,0 chr1 52117663 . T . PASS END=52117713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,102,1530:0,107,255:40,0 chr1 52135106 . G . PASS END=52135294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,138,255:40,0 chr1 52179675 . C . PASS END=52179751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:73:0,120,1800:0,180,255:40,0 chr1 52195647 . A . PASS END=52195653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr1 52195654 . T . PASS END=52195654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 52195655 . C . PASS END=52195659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 52195660 . T . PASS END=52195660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:10,0 chr1 52195661 . G . PASS END=52195673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 52205815 . A . PASS END=52205883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,170,255:40,0 chr1 52211208 . G . PASS END=52211303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,99,1485:0,116,255:40,0 chr1 52212382 . C . PASS END=52212429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:72:0,120,1800:0,189,255:40,0 chr1 52214041 . A . PASS END=52214070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:103:0,120,1800:0,254,255:40,0 chr1 52215174 . A . PASS END=52215175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 52215176 . A . PASS END=52215176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 52215177 . T . PASS END=52215212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,531:0,48,255:16,0 chr1 52215817 . A . PASS END=52215867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:62:0,120,1800:0,169,255:40,0 chr1 52218175 . A . PASS END=52218242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:34:0,88,1294:0,88,255:40,0 chr1 52218243 . A . PASS END=52218243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,994:0,74,255:33,0 chr1 52218244 . A . PASS END=52218248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1207:0,91,255:31,0 chr1 52218249 . A . PASS END=52218250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 52218251 . A . PASS END=52218252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:40:0,84,1260:0,120,255:28,0 chr1 52218374 . A . PASS END=52218397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:63:0,120,1800:0,170,255:40,0 chr1 52221992 . G . PASS END=52222041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,187,255:40,0 chr1 52226338 . C . PASS END=52226452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:84:38:0,84,1260:0,98,255:40,0 chr1 52227539 . A . PASS END=52227642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:30:0,87,1305:0,90,255:40,0 chr1 52227643 . G . PASS END=52227643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:25,0 chr1 52231494 . G . PASS END=52231652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:35:0,81,1215:0,92,255:40,2 chr1 52231653 . A . PASS END=52231653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 52237742 . T . PASS END=52237854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:37:0,99,1485:0,111,255:40,0 chr1 52238277 . A . PASS END=52238395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:30:0,87,1097:0,90,255:40,0 chr1 52242505 . G . PASS END=52242590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,133,255:40,0 chr1 52246836 . C . PASS END=52247007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:41:0,102,1800:0,102,255:40,0 chr1 52248231 . G . PASS END=52248249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,128,255:40,0 chr1 52248250 . C . PASS END=52248315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,144,255:40,0 chr1 52249587 . T . PASS END=52249697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,114,1710:0,144,255:40,0 chr1 52249936 . G . PASS END=52249999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,154,255:40,0 chr1 52250114 . G . PASS END=52250254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:94:37:0,94,1256:0,94,255:40,0 chr1 52251480 . T . PASS END=52251558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:62:0,120,1800:0,179,255:40,0 chr1 52252198 . G . PASS END=52252205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,100,1281:0,100,255:39,0 chr1 52252206 . A . PASS END=52252206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:38,0 chr1 52252207 . G . PASS END=52252289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,120,1800:0,126,255:40,0 chr1 52253025 . C . PASS END=52253160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,117,1755:0,125,255:40,0 chr1 52253387 . T . PASS END=52253461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,114,1750:0,114,255:40,0 chr1 52254908 . T . PASS END=52254908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 52254909 . T . PASS END=52254909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 52254910 . A . PASS END=52254917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:26,0 chr1 52254918 . A . PASS END=52254934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1169:0,80,255:34,0 chr1 52254935 . A . PASS END=52254935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1122:0,66,255:33,0 chr1 52254936 . A . PASS END=52255062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:35:0,81,1191:0,91,255:40,0 chr1 52255063 . G . PASS END=52255091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:25,0 chr1 52255092 . C . PASS END=52255092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 52255093 . C . PASS END=52255093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 52255094 . A . PASS END=52255094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 52255095 . T . PASS END=52255096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 52255097 . T . PASS END=52255097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:23,0 chr1 52255098 . C . PASS END=52255105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,71,255:24,0 chr1 52255240 . A . PASS END=52255329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:34:0,82,1213:0,82,255:40,0 chr1 52256205 . C . PASS END=52256321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:36:0,93,1305:0,93,255:40,0 chr1 52256572 . C . PASS END=52256662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,114,1710:0,124,255:40,0 chr1 52257250 . T . PASS END=52257333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,102,1530:0,123,255:40,0 chr1 52257718 . C . PASS END=52257770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:48:0,120,1800:0,123,255:40,0 chr1 52258049 . C . PASS END=52258097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,152,255:40,0 chr1 52260144 . C . PASS END=52260282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,1054:0,80,255:40,0 chr1 52260495 . T . PASS END=52260526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:84:0,120,1800:0,222,255:40,0 chr1 52263921 . T . PASS END=52264026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1129:0,80,255:40,0 chr1 52264027 . T . PASS END=52264063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:91:38:0,91,1360:0,91,255:40,0 chr1 52264064 . A G, 160.45 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,19,0:0,19,0:110:198,113,0,1407,113,1407:255,114,0:0,0:1.6045e+02,1.1045e+02,0.0000e+00,4.5000e+02,1.4522e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,26:0,0,19,19 chr1 52264065 . G . PASS END=52264074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,99,1473:0,104,255:38,0 chr1 52264075 . C . PASS END=52264083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:37:0,66,990:0,111,255:26,0 chr1 52266228 . T . PASS END=52266355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:39:0,101,1380:0,101,255:40,0 chr1 52269486 . A . PASS END=52269631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:32:0,83,1202:0,83,255:40,0 chr1 52269632 . C . PASS END=52269636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:23,0 chr1 52271182 . T . PASS END=52271233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:74:0,120,1800:0,191,255:40,0 chr1 52272466 . C . PASS END=52272585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,100,1607:0,100,255:40,0 chr1 52274987 . C . PASS END=52275073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,182,255:40,0 chr1 52275953 . C . PASS END=52276076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:46:0,105,1517:0,105,255:40,0 chr1 52277666 . T . PASS END=52277770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,126,255:40,0 chr1 52279707 . C . PASS END=52279761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:113:0,120,1800:0,255,255:40,0 chr1 52280223 . C . PASS END=52280281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,120,1800:0,135,255:40,0 chr1 52280365 . C . PASS END=52280485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:96:39:0,96,1541:0,96,255:40,0 chr1 52281984 . T . PASS END=52282061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,114,1710:0,154,255:40,0 chr1 52283738 . C . PASS END=52283807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,141,255:40,0 chr1 52285472 . C . PASS END=52285545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:63:0,120,1800:0,151,255:40,0 chr1 52287170 . T . PASS END=52287227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,146,255:40,0 chr1 52289336 . C . PASS END=52289458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,109,1754:0,109,255:40,0 chr1 52290959 . C . PASS END=52291053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:40:0,90,1350:0,113,255:40,0 chr1 52291054 . T . PASS END=52291054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1277:0,78,255:30,0 chr1 52293468 . C . PASS END=52293541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:67:0,120,1800:0,201,255:40,0 chr1 52299689 . C . PASS END=52299691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 52299692 . T . PASS END=52299692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 52299693 . C . PASS END=52299694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 52299695 . A . PASS END=52299695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,0 chr1 52299696 . G . PASS END=52299832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1080:0,83,255:40,0 chr1 52299833 . A . PASS END=52299842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:71:29:0,71,1031:0,71,255:26,0 chr1 52301803 . T . PASS END=52301884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,101,1800:0,101,255:40,0 chr1 52302041 . C . PASS END=52302044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 52302045 . A . PASS END=52302045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 52302046 . C . PASS END=52302047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 52302048 . G . PASS END=52302051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 52302052 . C . PASS END=52302056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 52302057 . T . PASS END=52302100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr1 52302101 . A . PASS END=52302110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1031:0,71,255:24,0 chr1 52303159 . C . PASS END=52303281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:84:34:0,84,1260:0,86,255:40,0 chr1 52303282 . C . PASS END=52303289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,79,255:23,0 chr1 52303290 . T . PASS END=52303290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1030:0,35,255:19,0 chr1 52303291 . T . PASS END=52303291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:21,0 chr1 52303292 . G . PASS END=52303292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 52305898 . C . PASS END=52305899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 52305900 . G . PASS END=52305900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 52305901 . T . PASS END=52305912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:33,0 chr1 52305913 . T . PASS END=52305913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:33,0 chr1 52305914 . T . PASS END=52306148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:93:35:0,93,1366:0,93,255:40,0 chr1 52306149 . T . PASS END=52306149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1621:0,67,255:40,0 chr1 52306150 . C . PASS END=52306157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:80:45:0,80,1508:0,80,255:40,0 chr1 52306158 . C . PASS END=52306158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1588:0,69,255:40,0 chr1 52306159 . C . PASS END=52306174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:42:0,80,1417:0,80,255:39,0 chr1 52306175 . A . PASS END=52306175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:31,0 chr1 52306176 . A . PASS END=52306178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1257:0,84,255:31,0 chr1 52306179 . T . PASS END=52306179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:30,0 chr1 52306180 . G . PASS END=52306180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 52306181 . A . PASS END=52306182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1284:0,75,255:31,0 chr1 52306183 . G . PASS END=52306183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 52306184 . T . PASS END=52306184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:25,0 chr1 52306185 . A . PASS END=52306185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 52306186 . T . PASS END=52306186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1202:0,53,255:25,0 chr1 52320898 . C . PASS END=52320908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,117,1618:0,117,255:40,0 chr1 52343947 . C . PASS END=52343947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 52343948 . G . PASS END=52343948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 52343949 . G . PASS END=52343951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 52343952 . T . PASS END=52343952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 52343953 . T . PASS END=52343958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 52343959 . G . PASS END=52343959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 52343960 . G . PASS END=52343961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 52343962 . T . PASS END=52343962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 52343963 . C . PASS END=52343964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 52343965 . C . PASS END=52343965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 52343966 . T . PASS END=52343969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 52343970 . A . PASS END=52343989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,460:0,40,255:19,0 chr1 52343990 . C . PASS END=52343992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 52343993 . C . PASS END=52343994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 52343995 . G . PASS END=52343995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 52343996 . C . PASS END=52343996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 52343997 . A . PASS END=52343997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 52343998 . T . PASS END=52343998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 52343999 . T . PASS END=52343999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:20,0 chr1 52344000 . A . PASS END=52344001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 52344002 . T . PASS END=52344002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 52344003 . G . PASS END=52344006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,764:0,69,255:23,0 chr1 52344007 . G . PASS END=52344007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 52344008 . A . PASS END=52344008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,652:0,36,255:21,0 chr1 52344009 . C . PASS END=52344009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 52344010 . C . PASS END=52344028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,841:0,69,255:24,0 chr1 52344029 . C . PASS END=52344029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 52344030 . A . PASS END=52344033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 52344034 . T . PASS END=52344034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:20,0 chr1 52344035 . C . PASS END=52344040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 52344041 . C . PASS END=52344043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 52344044 . C . PASS END=52344050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 52344051 . G . PASS END=52344051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:19,0 chr1 52344052 . G . PASS END=52344053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 52344054 . A . PASS END=52344054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 52344055 . A . PASS END=52344059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 52344060 . G . PASS END=52344060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:18,0 chr1 52344061 . C . PASS END=52344070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 52344071 . C . PASS END=52344071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,0 chr1 52344072 . C . PASS END=52344075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:23,0 chr1 52344076 . T . PASS END=52344077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 52344078 . C . PASS END=52344083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,876:0,69,255:23,0 chr1 52344084 . A . PASS END=52344084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 52344085 . T . PASS END=52344088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 52344089 . G . PASS END=52344089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 52344090 . C . PASS END=52344090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 52344091 . T . PASS END=52344091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 52344092 . G . PASS END=52344104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,886:0,69,255:25,0 chr1 52344105 . G . PASS END=52344112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:28,0 chr1 52344113 . T . PASS END=52344210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,854:0,61,255:26,0 chr1 52344211 . G . PASS END=52344212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 52344213 . C . PASS END=52344219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 52344220 . T . PASS END=52344220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 52344221 . C . PASS END=52344258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:26,0 chr1 52344259 . A . PASS END=52344259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:22,0 chr1 52344260 . C . PASS END=52344283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 52344284 . G . PASS END=52344287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 52385599 . C . PASS END=52385610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,647:0,41,255:19,0 chr1 52385611 . G . PASS END=52385623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 52385624 . A . PASS END=52385624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 52385625 . G . PASS END=52385638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,933:0,62,255:26,0 chr1 52385639 . G . PASS END=52385667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,892:0,81,255:33,0 chr1 52385668 . C . PASS END=52385670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 52385671 . C . PASS END=52385673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 52385674 . C . PASS END=52385680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,77,255:25,0 chr1 52385681 . G . PASS END=52385693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 52385694 . C . PASS END=52385732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,953:0,62,255:25,0 chr1 52385733 . A . PASS END=52385733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr1 52385734 . G . PASS END=52385743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 52385744 . A . PASS END=52385750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 52385751 . T . PASS END=52385765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 52385766 . T . PASS END=52385786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 52398990 . C . PASS END=52399020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1357:0,95,255:40,0 chr1 52399021 . A G, 48.95 PASS DP=45;MQ=248.50;MQRankSum=5.128;ReadPosRankSum=2.981;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,20,0:0.444,0.000:45:11,12,0:14,8,0:48:84,0,50,715,894,1610:255,0,255:24,0:4.8948e+01,7.7141e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,12,8:12,13,10,10 chr1 52399022 . G . PASS END=52399058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,120,1800:0,125,255:40,0 chr1 52399059 . T . PASS END=52399098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:37:0,94,1228:0,94,255:40,0 chr1 52399099 . C . PASS END=52399105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:36:0,66,990:0,108,255:25,0 chr1 52399106 . T . PASS END=52399106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:22,0 chr1 52399107 . G . PASS END=52399114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:25:0,63,945:0,63,255:21,0 chr1 52402966 . C . PASS END=52402966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 52402967 . A . PASS END=52402993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1141:0,90,255:40,0 chr1 52402994 . C . PASS END=52403072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:33:0,93,1395:0,99,255:40,0 chr1 52403073 . C . PASS END=52403079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1108:0,63,255:25,0 chr1 52403080 . G . PASS END=52403084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:57:31:0,57,855:0,60,255:19,0 chr1 52442562 . C . PASS END=52442591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr1 52442592 . A . PASS END=52442640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:25,0 chr1 52442641 . G . PASS END=52442641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 52442642 . C . PASS END=52442666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,884:0,69,255:25,0 chr1 52442667 . G . PASS END=52442667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 52442668 . C . PASS END=52442674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 52442675 . G . PASS END=52442681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:27,0 chr1 52442682 . G . PASS END=52442682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 52442683 . G . PASS END=52442683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 52442684 . T . PASS END=52442686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 52442687 . T . PASS END=52442689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 52442690 . C . PASS END=52442701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 52442702 . T . PASS END=52442703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52442704 . C . PASS END=52442708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 52442709 . G . PASS END=52442713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52442714 . G . PASS END=52442714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 52442715 . C . PASS END=52442732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 52442733 . A . PASS END=52442733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 52442734 . A . PASS END=52442739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 52442740 . T . PASS END=52442740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 52442741 . G . PASS END=52442741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 52442742 . G . PASS END=52442779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 52442780 . C . PASS END=52442780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 52442781 . T . PASS END=52442787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 52442788 . A . PASS END=52442789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 52486605 . T . PASS END=52486684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:39:0,87,1305:0,105,255:40,0 chr1 52489163 . C . PASS END=52489246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,165,255:40,0 chr1 52490182 . C . PASS END=52490251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:41:0,87,1436:0,87,255:40,0 chr1 52492947 . C . PASS END=52493020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,101,1724:0,101,255:40,0 chr1 52494250 . C . PASS END=52494302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:58:0,120,1800:0,158,255:40,0 chr1 52496208 . T . PASS END=52496220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,150,255:40,0 chr1 52498369 . T . PASS END=52498372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:26,0 chr1 52498373 . T . PASS END=52498382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:28,0 chr1 52498383 . G . PASS END=52498383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 52498384 . G . PASS END=52498394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,981:0,84,255:29,0 chr1 52498395 . G . PASS END=52498395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 52498396 . A . PASS END=52498396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 52498397 . A . PASS END=52498397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 52498398 . G . PASS END=52498399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 52498400 . A . PASS END=52498400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:28,0 chr1 52498401 . A . PASS END=52498411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 52498412 . A . PASS END=52498412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 52498413 . G . PASS END=52498419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1117:0,90,255:31,0 chr1 52498420 . C . PASS END=52498422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,966:0,73,255:30,0 chr1 52498423 . G . PASS END=52498429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 52498430 . T . PASS END=52498430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:29,0 chr1 52498431 . T . PASS END=52498437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 52498438 . A . PASS END=52498438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:28,0 chr1 52498439 . T . PASS END=52498446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 52498447 . A . PASS END=52498447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 52498448 . G . PASS END=52498505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1056:0,86,255:32,0 chr1 52498506 . T . PASS END=52498506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 52498507 . A . PASS END=52498514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 52498515 . A . PASS END=52498520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr1 52498521 . C . PASS END=52498521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:25,0 chr1 52498522 . T . PASS END=52498557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr1 52498558 . A . PASS END=52498563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 52498564 . C . PASS END=52498586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 52498587 . C . PASS END=52498616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 52498617 . G . PASS END=52498617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 52498618 . G . PASS END=52498618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 52498619 . T . PASS END=52498619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 52498620 . G . PASS END=52498640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 52498641 . G . PASS END=52498652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 52498653 . G . PASS END=52498661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr1 52498662 . G . PASS END=52498663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 52498664 . T . PASS END=52498667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 52498668 . G . PASS END=52498668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 52498669 . T . PASS END=52498673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr1 52498674 . G . PASS END=52498675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 52498676 . G . PASS END=52498676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 52498677 . C . PASS END=52498678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 52498679 . C . PASS END=52498682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 52498683 . T . PASS END=52498683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,413:0,28,255:13,0 chr1 52498684 . C . PASS END=52498684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 52498685 . T . PASS END=52498685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 52498686 . C . PASS END=52498688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 52498689 . A . PASS END=52498724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 52498725 . C . PASS END=52498744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:15,0 chr1 52498745 . A . PASS END=52498745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 52498746 . A . PASS END=52498746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 52498747 . T . PASS END=52498747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 52498748 . A . PASS END=52498750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 52498751 . G . PASS END=52498751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 52498752 . G . PASS END=52498752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 52498753 . C . PASS END=52498754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 52498755 . G . PASS END=52498755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 52498756 . G . PASS END=52498791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 52498792 . C . PASS END=52498803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:14:0,34,540:0,34,255:13,0 chr1 52498804 . C . PASS END=52498814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:14,0 chr1 52498815 . C . PASS END=52498873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr1 52498874 . A . PASS END=52498874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 52498875 . G . PASS END=52498875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 52498876 . A . PASS END=52498883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 52498884 . A . PASS END=52498884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 52498885 . C . PASS END=52498890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 52498891 . A . PASS END=52498892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 52498893 . C . PASS END=52498918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 52498919 . T . PASS END=52498924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 52498925 . A . PASS END=52498927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 52498928 . T . PASS END=52498929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 52498930 . G . PASS END=52498934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 52498935 . G . PASS END=52498935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 52498936 . G . PASS END=52498944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 52498945 . A . PASS END=52498963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 52498964 . G . PASS END=52499032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:19,0 chr1 52499033 . C . PASS END=52499033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr1 52499034 . A . PASS END=52499071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 52499072 . C . PASS END=52499072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 52499073 . C . PASS END=52499073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 52499074 . C . PASS END=52499074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr1 52499075 . G . PASS END=52499110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,651:0,51,255:18,0 chr1 52499111 . A . PASS END=52499113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 52499114 . C . PASS END=52499116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 52499117 . T . PASS END=52499117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 52499118 . A . PASS END=52499125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:14,0 chr1 52499126 . C . PASS END=52499146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:13,0 chr1 52499147 . C . PASS END=52499147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 52499148 . G . PASS END=52499148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 52499149 . T . PASS END=52499149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 52499150 . G . PASS END=52499155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 52499156 . C . PASS END=52499156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 52499157 . A . PASS END=52499160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 52499161 . G . PASS END=52499177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 52499178 . C . PASS END=52499178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:7,0 chr1 52499179 . T . PASS END=52499179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 52499180 . T . PASS END=52499180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,272:0,13,255:7,0 chr1 52499181 . T . PASS END=52499186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,304:0,27,255:9,0 chr1 52499187 . A . PASS END=52499188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 52499189 . T . PASS END=52499189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 52499190 . T . PASS END=52499200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 52499201 . A . PASS END=52499201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 52499202 . G . PASS END=52499206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:13,0 chr1 52499207 . A . PASS END=52499207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 52499208 . C . PASS END=52499248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 52499249 . A . PASS END=52499249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:11,0 chr1 52499250 . G . PASS END=52499251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 52499252 . G . PASS END=52499269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 52499270 . T . PASS END=52499270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 52499271 . C . PASS END=52499297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,505:0,44,255:19,0 chr1 52499298 . G . PASS END=52499298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 52499299 . G . PASS END=52499306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,714:0,46,255:19,0 chr1 52499307 . C . PASS END=52499310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 52499311 . C . PASS END=52499312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 52499313 . G . PASS END=52499314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 52499315 . A . PASS END=52499315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 52499316 . C . PASS END=52499316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 52499317 . A . PASS END=52499328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,756:0,66,255:23,0 chr1 52499329 . C . PASS END=52499329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 52499330 . A . PASS END=52499346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,67,255:25,0 chr1 52499347 . G . PASS END=52499355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 52499356 . A . PASS END=52499356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 52499357 . G . PASS END=52499359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 52499360 . A . PASS END=52499360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 52499361 . G . PASS END=52499371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 52499372 . A . PASS END=52499372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,982:0,68,255:26,0 chr1 52499373 . A . PASS END=52499380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52499381 . G . PASS END=52499390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 52499391 . T . PASS END=52499391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,754:0,31,255:22,0 chr1 52499392 . C . PASS END=52499395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 52499396 . C . PASS END=52499416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,864:0,75,255:25,0 chr1 52499417 . A . PASS END=52499417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,689:0,58,255:24,0 chr1 52499418 . A . PASS END=52499430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,917:0,72,255:25,0 chr1 52499431 . C . PASS END=52499433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:48:24:0,48,720:0,58,255:20,0 chr1 52499714 . T . PASS END=52499723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr1 52507209 . C . PASS END=52507269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:74:0,120,1800:0,200,255:40,0 chr1 52520672 . C . PASS END=52520730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:92:34:0,92,1258:0,92,255:40,0 chr1 52520731 . A . PASS END=52520731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1255:0,75,255:32,0 chr1 52520732 . G . PASS END=52520741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1136:0,88,255:33,0 chr1 52520742 . G . PASS END=52520766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 52520767 . A . PASS END=52520768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:26:0,48,720:0,78,255:16,0 chr1 52525520 . A . PASS END=52525573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:55:0,99,1485:0,160,255:40,0 chr1 52526100 . G . PASS END=52526111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:25,0 chr1 52526112 . A . PASS END=52526112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 52526113 . A . PASS END=52526125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,74,255:26,0 chr1 52526126 . C . PASS END=52526126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 52526127 . T . PASS END=52526130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 52526131 . A . PASS END=52526133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 52526134 . T . PASS END=52526134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:26,0 chr1 52526135 . T . PASS END=52526153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr1 52526154 . C . PASS END=52526154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:27,0 chr1 52526155 . T . PASS END=52526160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 52526161 . A . PASS END=52526192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 52526193 . C . PASS END=52526193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 52526194 . T . PASS END=52526196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 52526197 . T . PASS END=52526210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 52530497 . G . PASS END=52530610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:33:0,83,1260:0,83,255:40,0 chr1 52549012 . G . PASS END=52549015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 52549016 . A . PASS END=52549016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:24,0 chr1 52549017 . C . PASS END=52549053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,850:0,61,255:26,0 chr1 52549054 . A . PASS END=52549054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 52549055 . A . PASS END=52549057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 52549058 . C . PASS END=52549058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 52549059 . C . PASS END=52549096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,779:0,61,255:26,0 chr1 52549097 . T . PASS END=52549097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 52549098 . T . PASS END=52549106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 52549107 . T . PASS END=52549108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 52549109 . C . PASS END=52549113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 52549114 . G . PASS END=52549123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,810:0,53,255:19,0 chr1 52549124 . T . PASS END=52549124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,629:0,30,255:16,0 chr1 52549125 . C . PASS END=52549125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 52549126 . A . PASS END=52549128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 52549129 . G . PASS END=52549130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,721:0,47,255:20,0 chr1 52549131 . A . PASS END=52549131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 52549132 . A . PASS END=52549132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 52549133 . T . PASS END=52549138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 52549139 . C . PASS END=52549139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 52549140 . T . PASS END=52549142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 52549143 . A . PASS END=52549156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:18,0 chr1 52549157 . T . PASS END=52549157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:14,0 chr1 52549158 . T . PASS END=52549160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,649:0,41,255:15,0 chr1 52549161 . T . PASS END=52549161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 52549162 . G . PASS END=52549175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,615:0,48,255:17,0 chr1 52549176 . A . PASS END=52549176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 52549177 . A . PASS END=52549179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 52549180 . C . PASS END=52549206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:13,0 chr1 52549207 . C . LowGQ END=52549207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 52549208 . G . PASS END=52549213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 52551784 . T . PASS END=52551851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,185,255:40,0 chr1 52552384 . A . PASS END=52552430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,170,255:40,0 chr1 52698879 . A . PASS END=52698948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:68:0,120,1800:0,149,255:40,0 chr1 52703160 . A . PASS END=52705252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:35:0,81,1215:0,89,255:40,1 chr1 52705253 . A . PASS END=52705255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 52705256 . G . PASS END=52705257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 52705258 . A . PASS END=52705267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,947:0,67,255:26,0 chr1 52729445 . G . PASS END=52729445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:15:32:0,15,916:0,15,255:25,0 chr1 52729446 . T . LowGQ END=52729451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:33:0,0,806:0,0,255:29,0 chr1 52729452 . G . PASS END=52729452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1105:0,58,255:29,0 chr1 52729453 . T . LowGQ END=52729453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:35:0,0,869:75,0,255:29,0 chr1 52729454 . G . PASS END=52729454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:30,0 chr1 52729455 . C . LowGQ END=52729455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:0:37:0,0,1039:22,0,255:31,0 chr1 52729456 . T . PASS END=52729456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,1053:0,28,255:30,0 chr1 52729457 . T . PASS END=52729457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:34:39:0,34,1153:0,34,255:33,0 chr1 52729458 . C . LowGQ END=52729460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:0:39:0,0,1074:27,0,255:34,0 chr1 52729461 . G . PASS END=52729461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1272:0,51,255:34,0 chr1 52729462 . C . LowGQ END=52729463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:0:41:0,0,1114:21,0,255:35,0 chr1 52729464 . G . PASS END=52729464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1336:0,76,255:35,0 chr1 52729465 . T . LowGQ END=52729466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:0:41:0,0,1161:21,0,255:35,0 chr1 52729467 . G . PASS END=52729467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1412:0,90,255:35,0 chr1 52729468 . C . PASS END=52729468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:12:41:0,12,1172:0,12,255:35,0 chr1 52729469 . C . LowGQ END=52729470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:0:41:0,0,1131:4,0,255:35,0 chr1 52729471 . G . PASS END=52729471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:41:0,92,1370:0,92,255:35,0 chr1 52729472 . A . LowGQ END=52729475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:0:43:0,0,1294:9,0,255:39,0 chr1 52729476 . G . PASS END=52729476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:45:0,85,1482:0,85,255:39,0 chr1 52729477 . T . PASS END=52729478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:2:45:0,2,1343:0,2,255:39,0 chr1 52729479 . A . PASS END=52729479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:16:45:0,16,1371:0,16,255:38,0 chr1 52729480 . A . PASS END=52729480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:51:45:0,51,1131:0,51,255:39,0 chr1 52729481 . C . PASS END=52729481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:2:45:0,2,1390:0,2,255:40,0 chr1 52729482 . T . PASS END=52729482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:49:45:0,49,1466:0,49,255:40,0 chr1 52729483 . G . PASS END=52729489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:86:48:0,86,1564:0,86,255:40,0 chr1 52729490 . A . PASS END=52729490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1631:0,75,255:40,0 chr1 52729491 . T . PASS END=52729492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:48:0,111,1585:0,111,255:40,0 chr1 52729493 . G . PASS END=52729493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:66:48:0,66,1643:0,66,255:40,0 chr1 52729494 . A . PASS END=52729494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:48:0,111,1660:0,111,255:40,0 chr1 52729495 . C . PASS END=52729495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1625:0,75,255:40,0 chr1 52729496 . A . PASS END=52729516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:39:0,83,1440:0,83,255:40,0 chr1 52729517 . G . PASS END=52729517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:32,0 chr1 52729518 . T . PASS END=52729521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:37:0,93,1395:0,98,255:32,0 chr1 52729522 . C . PASS END=52729522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1200:0,36,255:27,0 chr1 52729523 . T . PASS END=52729523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:27,0 chr1 52729524 . G . PASS END=52729529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 52729530 . C . PASS END=52729544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:24,0 chr1 52732327 . C . PASS END=52732336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,747:0,63,255:25,0 chr1 52732337 . G . PASS END=52732337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 52732338 . G . PASS END=52732339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,929:0,75,255:25,0 chr1 52732340 . G . PASS END=52732340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 52732341 . A . PASS END=52732342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 52732343 . C . PASS END=52732343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 52732344 . A . PASS END=52732344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 52732345 . T . PASS END=52732348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 52732349 . G . PASS END=52732353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr1 52732354 . C . PASS END=52732355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52732356 . T . PASS END=52732358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 52732359 . A . PASS END=52732362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 52732363 . A . PASS END=52732365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,990:0,68,255:26,0 chr1 52732366 . G . PASS END=52732402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1264:0,89,255:38,0 chr1 52732403 . T . PASS END=52732403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1365:0,51,255:35,0 chr1 52732404 . A . PASS END=52732435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1341:0,95,255:35,0 chr1 52732436 . A . PASS END=52732436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:33,0 chr1 52732437 . G . PASS END=52732446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1327:0,80,255:36,0 chr1 52732447 . C . PASS END=52732447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:32,0 chr1 52732448 . T . PASS END=52732452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 52732453 . C . PASS END=52732455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1316:0,72,255:34,1 chr1 52732456 . C . PASS END=52732457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 52732458 . A . PASS END=52732458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1125:0,58,255:31,0 chr1 52732459 . C . PASS END=52732474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1125:0,82,255:33,0 chr1 52732475 . G . PASS END=52732475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:28,0 chr1 52732476 . G . PASS END=52732492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1153:0,80,255:31,0 chr1 52732493 . T . PASS END=52732493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 52732494 . G . PASS END=52732494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:29,0 chr1 52732495 . G . PASS END=52732498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 52732499 . A . PASS END=52732503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 52734135 . T . PASS END=52734136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 52734137 . G . PASS END=52734139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 52734140 . C . PASS END=52734140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 52734141 . A . PASS END=52734276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:28:0,84,1055:0,84,255:40,0 chr1 52734277 . A . PASS END=52734277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1645:0,75,255:34,0 chr1 52734278 . G . PASS END=52734304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1156:0,83,255:37,0 chr1 52740136 . A . PASS END=52740256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:33:0,87,1230:0,94,255:40,0 chr1 52744164 . A . PASS END=52744286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:32:0,96,1151:0,96,255:40,0 chr1 52747333 . A . PASS END=52747488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:32:0,82,1111:0,82,255:40,0 chr1 52759125 . G . PASS END=52759126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr1 52759127 . A . PASS END=52759134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 52759135 . G . PASS END=52759135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 52759136 . A . PASS END=52759136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 52759137 . G . PASS END=52759140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:37,0 chr1 52759141 . C . PASS END=52759141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1349:0,98,255:37,0 chr1 52759142 . T . PASS END=52759144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:37,0 chr1 52759145 . G . PASS END=52759327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:35:0,82,1260:0,82,255:40,0 chr1 52759328 . A . PASS END=52759343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:25,0 chr1 52759344 . A . PASS END=52759349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 52761567 . T . PASS END=52761649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,118,1800:0,118,255:40,0 chr1 52769493 . G . PASS END=52769597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,128,255:40,0 chr1 52774542 . G . PASS END=52774607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,151,255:40,0 chr1 52798440 . A . PASS END=52798590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:97:38:0,97,1311:0,97,255:40,1 chr1 52800360 . T . PASS END=52800440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,120,1800:0,135,255:40,0 chr1 52803444 . A . PASS END=52803606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:35:0,84,1197:0,87,255:40,0 chr1 52805798 . T . PASS END=52805898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1225:0,81,255:40,0 chr1 52805899 . C . PASS END=52805903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:25,0 chr1 52810440 . G . PASS END=52810447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 52810448 . C . PASS END=52810448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 52810449 . C . PASS END=52810460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,681:0,41,255:19,0 chr1 52810461 . G . PASS END=52810463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr1 52810464 . C . PASS END=52810464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 52810465 . A . PASS END=52810465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:25,0 chr1 52810466 . G . PASS END=52810616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1260:0,87,255:40,0 chr1 52811732 . G . PASS END=52811743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:24,0 chr1 52811744 . G . PASS END=52811744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 52811745 . C . PASS END=52811750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:26,0 chr1 52811751 . G . PASS END=52811763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 52811764 . C . PASS END=52811764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 52811765 . C . PASS END=52811773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52811774 . C . PASS END=52811787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:26:0,64,931:0,64,255:26,0 chr1 52811788 . T . PASS END=52811792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 52811793 . A . PASS END=52811793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 52811794 . C . PASS END=52811794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 52811795 . A . PASS END=52811795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 52811796 . G . PASS END=52811810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr1 52811811 . T . PASS END=52811829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,939:0,67,255:26,0 chr1 52811830 . C . PASS END=52811840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 52811841 . A . LowGQ END=52811841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,474:23,0,255:16,0 chr1 52811842 . G . PASS END=52811870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,668:0,43,255:19,0 chr1 52811871 . A . PASS END=52811872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 52811873 . A . PASS END=52811878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:16,0 chr1 52811879 . G . PASS END=52811879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 52811880 . A . PASS END=52811885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 52811886 . T . PASS END=52811886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 52811887 . C . PASS END=52811890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 52811891 . T . PASS END=52811891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 52811892 . A . PASS END=52811893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 52818845 . T . PASS END=52818849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,607:0,40,255:19,0 chr1 52818850 . T . PASS END=52818850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:17,0 chr1 52818851 . C . PASS END=52818852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 52818853 . T . PASS END=52818853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr1 52818854 . G . PASS END=52818859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr1 52818860 . T . PASS END=52818861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 52818862 . G . PASS END=52818864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,774:0,50,255:19,0 chr1 52818865 . G . PASS END=52818870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 52818871 . C . PASS END=52818872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 52818873 . C . PASS END=52818873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 52818874 . C . PASS END=52818874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 52818875 . T . LowGQ END=52818875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,582:1,0,255:17,0 chr1 52818876 . C . PASS END=52818877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 52818878 . C . PASS END=52818889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 52818890 . C . PASS END=52818890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 52818891 . A . PASS END=52818895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 52819191 . T . PASS END=52819215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,884:0,69,255:26,0 chr1 52819216 . A . PASS END=52819228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:31,0 chr1 52819229 . T . PASS END=52819229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:29,0 chr1 52819230 . G . PASS END=52819303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1218:0,86,255:34,0 chr1 52819304 . T . PASS END=52819304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1070:0,41,255:29,0 chr1 52819305 . C . PASS END=52819313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 52819314 . C . PASS END=52819319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,1116:0,63,255:26,0 chr1 52820280 . C . PASS END=52820364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,108,1515:0,108,255:40,0 chr1 52820365 . A . PASS END=52820365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:59:49:0,59,1570:0,59,255:40,0 chr1 52820366 . A . PASS END=52820370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,120,1800:0,128,255:40,0 chr1 52820512 . C . PASS END=52820611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:45:0,96,1495:0,96,255:40,0 chr1 52821070 . C . PASS END=52821121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1032:0,85,255:34,0 chr1 52821280 . C . PASS END=52821338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:42:0,96,1472:0,96,255:40,0 chr1 52821443 . C . PASS END=52821474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:34,0 chr1 52821475 . A . PASS END=52821475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr1 52821476 . T . PASS END=52821516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1109:0,82,255:34,0 chr1 52821858 . C . PASS END=52821858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:17,0 chr1 52821859 . T . PASS END=52821859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,598:0,27,255:16,0 chr1 52821860 . C . PASS END=52821868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 52821869 . G . PASS END=52821869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,557:0,10,255:15,0 chr1 52821870 . A . PASS END=52821872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 52821873 . G . PASS END=52821873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:16,0 chr1 52821874 . T . PASS END=52821893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,457:0,40,255:19,0 chr1 52821894 . G . PASS END=52821913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,709:0,60,255:26,0 chr1 52821914 . A . PASS END=52821944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1109:0,87,255:31,0 chr1 52821945 . T . PASS END=52821945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 52821946 . T . PASS END=52821974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,96,255:38,0 chr1 52822056 . C . PASS END=52822114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,108,1530:0,113,255:40,0 chr1 52822673 . C . PASS END=52822768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1260:0,93,255:40,0 chr1 52822769 . A . PASS END=52822769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 52822770 . C . PASS END=52822776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 52822777 . C . PASS END=52822798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,929:0,65,255:26,0 chr1 52823198 . C . PASS END=52823227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:19,0 chr1 52823228 . G . PASS END=52823253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,768:0,63,255:26,0 chr1 52823254 . A . PASS END=52823259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,881:0,81,255:27,0 chr1 52823260 . C . PASS END=52823261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 52823262 . A . PASS END=52823270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52823271 . T . PASS END=52823281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 52823282 . C . PASS END=52823340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:32,0 chr1 52823341 . G . PASS END=52823370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 52823453 . C . PASS END=52823471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:31:12:0,31,413:0,31,255:15,0 chr1 52823472 . C . PASS END=52823501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:16,0 chr1 52823502 . G . PASS END=52823502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 52823503 . C . PASS END=52823506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 52823507 . G . PASS END=52823507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 52823508 . G . PASS END=52823515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 52823516 . G . PASS END=52823529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:14:0,34,540:0,34,255:13,0 chr1 52823530 . G . PASS END=52823530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 52823531 . C . PASS END=52823532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 52823533 . G . PASS END=52823534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,449:0,23,255:11,0 chr1 52823535 . T . PASS END=52823546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 52823547 . T . LowGQ END=52823549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,373:0,0,255:13,2 chr1 52823550 . G . PASS END=52823555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 52823556 . T . PASS END=52823556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 52823557 . G . PASS END=52823560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 52823561 . G . PASS END=52823563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 52823564 . G . PASS END=52823572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 52823573 . G . PASS END=52823578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 52823579 . G . PASS END=52823588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 52824003 . C . PASS END=52824085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr1 52824086 . C . PASS END=52824093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 52824094 . A . PASS END=52824100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 52824101 . T . PASS END=52824133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 52824358 . C . PASS END=52824396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1082:0,80,255:33,0 chr1 52824397 . C . PASS END=52824397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:26,0 chr1 52824398 . T . PASS END=52824401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 52824402 . C . PASS END=52824403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1108:0,63,255:28,0 chr1 52824404 . G . PASS END=52824404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 52824405 . T . PASS END=52824405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 52824406 . G . PASS END=52824406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 52824407 . T . PASS END=52824408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 52824409 . C . PASS END=52824430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 52824699 . C . PASS END=52824712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 52824713 . C . PASS END=52824747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:16,0 chr1 52824748 . C . PASS END=52824748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr1 52824749 . G . PASS END=52824786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr1 52824787 . T . PASS END=52824787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 52824788 . G . PASS END=52824792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 52824793 . A . PASS END=52824793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 52824794 . G . PASS END=52824794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 52824795 . G . PASS END=52824799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 52824800 . C . PASS END=52824800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 52824801 . C . PASS END=52824802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 52824803 . G . PASS END=52824803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 52824804 . C . PASS END=52824814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 52824815 . A . PASS END=52824829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:15,0 chr1 52824922 . C . PASS END=52824926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 52824927 . G . PASS END=52824957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 52824958 . G . PASS END=52824958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 52824959 . C . PASS END=52824961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 52824962 . T . PASS END=52824964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 52824965 . C . PASS END=52825018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 52825019 . G . PASS END=52825029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 52825131 . C . PASS END=52825179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:25,0 chr1 52825180 . C . PASS END=52825180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 52825181 . A . PASS END=52825196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,853:0,66,255:22,0 chr1 52825197 . C . PASS END=52825197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 52825198 . A . PASS END=52825206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 52825377 . C . PASS END=52825384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 52825385 . T . PASS END=52825385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 52825386 . C . PASS END=52825395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 52825396 . T . PASS END=52825396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr1 52825397 . C . PASS END=52825415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1178:0,83,255:30,0 chr1 52825416 . T . PASS END=52825416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 52825417 . C . PASS END=52825454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1202:0,93,255:38,0 chr1 52825455 . T . PASS END=52825455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1369:0,74,255:34,0 chr1 52825456 . C . PASS END=52825555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1350:0,92,255:40,0 chr1 52825746 . C . PASS END=52825749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 52825750 . C . PASS END=52825750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 52825751 . T . PASS END=52825765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 52825766 . G . PASS END=52825818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:19,0 chr1 52825819 . C . PASS END=52825819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 52825820 . C . PASS END=52825843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,659:0,41,255:19,0 chr1 52825844 . G . PASS END=52825844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 52825845 . G . PASS END=52825847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:19:0,46,595:0,46,255:19,0 chr1 52825848 . T . PASS END=52825848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 52825849 . C . PASS END=52825849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:19,0 chr1 52825850 . T . PASS END=52825850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 52825851 . C . PASS END=52825855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 52825856 . T . PASS END=52825859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 52825860 . T . PASS END=52825860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 52825861 . G . PASS END=52825862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 52825863 . T . PASS END=52825863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 52825864 . C . PASS END=52825883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 52825884 . A . PASS END=52825884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 52825885 . G . PASS END=52825893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 52825894 . C . PASS END=52825894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 52825895 . G . PASS END=52825901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 52825902 . A . PASS END=52825905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 52826096 . C . PASS END=52826096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 52826097 . T . PASS END=52826097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:18,0 chr1 52826098 . T . PASS END=52826098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 52826099 . C . PASS END=52826103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 52826104 . C . PASS END=52826109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 52826110 . C . PASS END=52826142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:23,0 chr1 52826143 . C . PASS END=52826149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,979:0,84,255:28,0 chr1 52826150 . A . PASS END=52826150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:27,0 chr1 52826151 . C . PASS END=52826168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:29,0 chr1 52826169 . T . PASS END=52826169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 52826170 . A . PASS END=52826185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:27,0 chr1 52826186 . C . PASS END=52826221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,937:0,65,255:26,0 chr1 52826646 . C . PASS END=52826778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1288:0,88,255:40,0 chr1 52826779 . A . PASS END=52826781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,117,255:26,0 chr1 52826782 . C . PASS END=52826799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr1 52826800 . T . PASS END=52826804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 52827185 . C . PASS END=52827212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:55:0,84,1800:0,84,255:40,5 chr1 52827213 . T . PASS END=52827214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,5:71:37:70:0,37,2217:0,37,255:40,5 chr1 52827215 . C . PASS END=52827215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,6:73:29:73:0,29,2211:0,29,255:40,5 chr1 52827216 . T . PASS END=52827288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:39:0,81,1665:0,81,255:40,0 chr1 52828274 . C . PASS END=52828290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,598:0,48,255:19,0 chr1 52828291 . G . PASS END=52828294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 52828295 . T . PASS END=52828295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 52828296 . C . PASS END=52828362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:21:0,62,728:0,62,255:26,0 chr1 52828363 . G . PASS END=52828363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 52828364 . C . PASS END=52828365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 52828366 . T . PASS END=52828366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 52828367 . C . PASS END=52828369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 52828370 . C . PASS END=52828370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 52828371 . C . PASS END=52828372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 52828373 . T . PASS END=52828373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 52828374 . G . PASS END=52828383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 52828384 . A . PASS END=52828414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,47,255:19,0 chr1 52828415 . C . PASS END=52828418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 52830224 . C . PASS END=52830225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 52830226 . G . PASS END=52830226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 52830227 . C . PASS END=52830228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 52830229 . T . PASS END=52830229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 52830230 . G . PASS END=52830245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:23,0 chr1 52830246 . T . PASS END=52830246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 52830247 . G . PASS END=52830250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 52830251 . T . PASS END=52830251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 52830252 . C . PASS END=52830255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 52830256 . C . PASS END=52830256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 52830257 . C . PASS END=52830264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:23,0 chr1 52830265 . C . PASS END=52830265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 52830266 . C . PASS END=52830274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:23,0 chr1 52830275 . T . PASS END=52830275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:20,0 chr1 52830276 . C . PASS END=52830289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 52830290 . C . PASS END=52830292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 52838627 . C . PASS END=52838627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 52838853 . T . PASS END=52838854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 52838855 . A . PASS END=52838855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 52838856 . C . PASS END=52838861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1119:0,90,255:30,0 chr1 52838862 . T . PASS END=52838862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 52838863 . T . PASS END=52838863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 52838864 . T . PASS END=52838869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 52838870 . C . PASS END=52838879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1157:0,82,255:31,0 chr1 52838880 . A . PASS END=52838880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:30,0 chr1 52838881 . T . PASS END=52839012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1052:0,80,255:35,0 chr1 52839013 . T . PASS END=52839023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:25,0 chr1 52839024 . C . PASS END=52839048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,546:0,51,255:18,0 chr1 52840482 . C . PASS END=52840519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1173:0,83,255:37,0 chr1 52840520 . A . PASS END=52840520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr1 52840521 . C . PASS END=52840527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,105,255:33,0 chr1 52840528 . A . PASS END=52840528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:29,0 chr1 52840529 . G . PASS END=52840535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:31,0 chr1 52840536 . T . PASS END=52840541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 52840542 . G . PASS END=52840542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 52840543 . A . PASS END=52840548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:25,0 chr1 52840549 . T . PASS END=52840568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:40:19:0,40,637:0,40,255:19,0 chr1 52840569 . T . PASS END=52840569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:17,0 chr1 52841092 . A . PASS END=52841092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 52841102 . T . PASS END=52841104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1235:0,86,255:34,0 chr1 52841105 . A . PASS END=52841105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:33,0 chr1 52841106 . T . PASS END=52841251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1233:0,81,255:40,0 chr1 52841252 . T . PASS END=52841252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:28,0 chr1 52841253 . C . PASS END=52841259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:30,0 chr1 52841260 . C . PASS END=52841271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:26:0,63,945:0,68,255:26,0 chr1 52847314 . C . PASS END=52847347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1094:0,83,255:38,0 chr1 52847348 . A . PASS END=52847348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1302:0,67,255:36,0 chr1 52847349 . A . PASS END=52847412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,90,255:40,0 chr1 52847413 . G . PASS END=52847428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 52847429 . A . PASS END=52847433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 52849092 . C . PASS END=52849105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,887:0,72,255:26,0 chr1 52849106 . C . PASS END=52849107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 52849108 . C . PASS END=52849127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:26,0 chr1 52849128 . T . PASS END=52849143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr1 52849144 . T . PASS END=52849144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,980:0,63,255:29,0 chr1 52849145 . T . PASS END=52849154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 52849155 . C . PASS END=52849155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 52849156 . A . PASS END=52849195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1141:0,83,255:36,0 chr1 52849196 . A . PASS END=52849196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 52849197 . G . PASS END=52849201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1173:0,88,255:34,0 chr1 52849202 . T . PASS END=52849202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 52849203 . G . PASS END=52849203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:32,0 chr1 52849204 . T . PASS END=52849204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:33,0 chr1 52849205 . A . PASS END=52849205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:32,0 chr1 52849206 . C . PASS END=52849207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:33,0 chr1 52849208 . T . PASS END=52849212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:32,0 chr1 52849213 . T . PASS END=52849213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:31,0 chr1 52849214 . C . PASS END=52849221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1117:0,82,255:32,0 chr1 52849222 . T . PASS END=52849241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:62:26:0,62,906:0,62,255:26,0 chr1 52849502 . C . PASS END=52849512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1048:0,87,255:31,0 chr1 52849513 . G . PASS END=52849513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 52849514 . C . PASS END=52849536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:33,0 chr1 52849537 . A . PASS END=52849537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1103:0,72,255:33,0 chr1 52849538 . C . PASS END=52849609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,83,255:36,0 chr1 52850222 . C . PASS END=52850223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,102,1530:0,108,255:35,0 chr1 52850224 . G . PASS END=52850224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 52850225 . C . PASS END=52850309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1244:0,81,255:40,0 chr1 52850310 . T . PASS END=52850310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 52850311 . G . PASS END=52850360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1147:0,80,255:36,0 chr1 52850361 . C . PASS END=52850371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,77,255:27,0 chr1 52850372 . G . PASS END=52850372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:21,0 chr1 52850373 . A . PASS END=52850375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:22,0 chr1 52850376 . C . PASS END=52850388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:18:0,45,675:0,54,255:18,0 chr1 52850389 . T . PASS END=52850393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 52850833 . C . PASS END=52850934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:36:0,90,1335:0,99,255:40,0 chr1 52850936 . T . PASS END=52850936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 52851524 . C . PASS END=52851524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 52851525 . T . PASS END=52851537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 52851538 . C . PASS END=52851539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 52851540 . C . PASS END=52851549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:25,0 chr1 52851550 . G . PASS END=52851552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 52851553 . T . PASS END=52851622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,64,255:26,0 chr1 52854114 . A . PASS END=52854115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1049:0,87,255:32,0 chr1 52854116 . T . PASS END=52854120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1034:0,65,255:31,0 chr1 52854121 . T . PASS END=52854286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1073:0,80,255:40,0 chr1 52854287 . C . PASS END=52854303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,74,255:25,0 chr1 52854304 . A . PASS END=52854304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 52854305 . G . PASS END=52854306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 52854307 . A . PASS END=52854307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 52854308 . A . PASS END=52854308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 52854309 . C . PASS END=52854309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 52854889 . C . PASS END=52854993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:43:0,116,1590:0,116,255:40,0 chr1 52854997 . C . PASS END=52854997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 52859058 . A . PASS END=52859059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr1 52859115 . C . PASS END=52859351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:31:0,81,1215:0,89,255:40,0 chr1 52859352 . T . PASS END=52859352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 52859353 . T . PASS END=52859385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:31,0 chr1 52859386 . T . PASS END=52859386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,934:0,59,255:28,0 chr1 52859387 . C . PASS END=52859401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr1 52859402 . T . PASS END=52859406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 52859407 . G . PASS END=52859413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 52859414 . T . PASS END=52859425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,986:0,67,255:26,0 chr1 52859426 . A . PASS END=52859432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:19,0 chr1 52859433 . G . PASS END=52859433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:17,0 chr1 52859434 . A . PASS END=52859436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:18,0 chr1 52859437 . C . PASS END=52859438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 52859439 . C . PASS END=52859439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 52859440 . A . PASS END=52859448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 52859449 . G . PASS END=52859450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 52859451 . T . PASS END=52859451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 52859452 . G . PASS END=52859471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:19,0 chr1 52859472 . A . PASS END=52859475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 52861716 . A . PASS END=52861737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:23,0 chr1 52861738 . C . PASS END=52861738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 52861739 . T . PASS END=52861747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:23:0,62,793:0,62,255:26,0 chr1 52861748 . G . PASS END=52861751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr1 52861752 . A . PASS END=52861752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 52861753 . A . PASS END=52861756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 52861757 . G . PASS END=52861757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:27,0 chr1 52861758 . A . PASS END=52861758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1007:0,60,255:27,0 chr1 52861759 . T . PASS END=52861777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr1 52861778 . A . PASS END=52861778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:31,0 chr1 52861779 . T . PASS END=52862011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1150:0,83,255:40,0 chr1 52862012 . C . PASS END=52862025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,64,255:26,0 chr1 52862026 . A . PASS END=52862026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 52862027 . A . PASS END=52862036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 52862043 . T . PASS END=52862043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 52863357 . C . PASS END=52863369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 52863370 . A . PASS END=52863374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 52863375 . G . PASS END=52863375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:19,0 chr1 52863376 . G . PASS END=52863380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 52863381 . C . PASS END=52863381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,2 chr1 52863382 . G . LowGQ END=52863382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,737:0,0,255:21,2 chr1 52863383 . C . PASS END=52863383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:22,0 chr1 52863384 . A . PASS END=52863404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,771:0,66,255:25,0 chr1 52863405 . C . PASS END=52863409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr1 52863410 . A . PASS END=52863419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr1 52863420 . G . PASS END=52863422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52863423 . T . PASS END=52863423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 52863424 . A . PASS END=52863428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52863429 . C . PASS END=52863432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,986:0,67,255:26,0 chr1 52863433 . G . PASS END=52863436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 52863437 . C . PASS END=52863438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 52863439 . G . PASS END=52863462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1103:0,85,255:33,0 chr1 52863463 . T . PASS END=52863467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:32,0 chr1 52863468 . G . PASS END=52863492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1178:0,83,255:30,0 chr1 52863493 . A . PASS END=52863535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:26,0 chr1 52867034 . C . PASS END=52867161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,147,255:40,0 chr1 52867801 . C . PASS END=52867818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1152:0,88,255:36,0 chr1 52867819 . A . PASS END=52867819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr1 52867820 . G . PASS END=52867895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1324:0,92,255:40,0 chr1 52867912 . T . PASS END=52867912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 52870090 . G . PASS END=52870090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 52870111 . G . PASS END=52870111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 52870422 . A . PASS END=52870441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,582:0,44,255:19,0 chr1 52870442 . G . PASS END=52870461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:25,0 chr1 52870462 . G . PASS END=52870471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:31,0 chr1 52870472 . T . PASS END=52870472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:30,0 chr1 52870473 . C . PASS END=52870475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr1 52870476 . T . PASS END=52870476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:30,0 chr1 52870477 . A . PASS END=52870516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1095:0,83,255:32,0 chr1 52870517 . C . PASS END=52870540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:25,0 chr1 52870541 . T . PASS END=52870551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 52871352 . C . PASS END=52871355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 52871356 . A . PASS END=52871356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:23,0 chr1 52871357 . C . PASS END=52871371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,931:0,64,255:26,0 chr1 52871372 . G . PASS END=52871376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 52871377 . G . PASS END=52871377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 52871378 . G . PASS END=52871461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:34:0,84,1126:0,84,255:40,0 chr1 52871462 . C . PASS END=52871462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr1 52871463 . A . PASS END=52871470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1252:0,97,255:36,0 chr1 52871471 . A . PASS END=52871471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1124:0,58,255:30,0 chr1 52871472 . A . PASS END=52871474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,95,255:32,0 chr1 52871475 . A . PASS END=52871475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:30,0 chr1 52871476 . T . PASS END=52871476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 52871477 . A . PASS END=52871477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1203:0,56,255:29,0 chr1 52871478 . T . PASS END=52871478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1191:0,91,255:30,0 chr1 52871479 . C . PASS END=52871479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:27,0 chr1 52871480 . A . PASS END=52871480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1078:0,33,255:26,0 chr1 52871481 . T . PASS END=52871486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:28,0 chr1 52871487 . A . PASS END=52871487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:26,0 chr1 52871488 . G . PASS END=52871488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 52871489 . T . PASS END=52871489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 52871490 . T . PASS END=52871490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:24,0 chr1 52871491 . T . PASS END=52871491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:25,0 chr1 52871492 . A . PASS END=52871492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 52871493 . T . PASS END=52871496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr1 52871497 . A . PASS END=52871497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr1 52871498 . A . PASS END=52871498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 52871499 . A . PASS END=52871499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,922:0,34,255:24,0 chr1 52871500 . T . PASS END=52871500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 52871501 . G . PASS END=52871501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,843:0,45,255:23,0 chr1 52871502 . A . PASS END=52871510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,854:0,61,255:25,0 chr1 52871511 . A . PASS END=52871511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:24,0 chr1 52874014 . T . PASS END=52874132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1117:0,80,255:40,0 chr1 52874241 . G . PASS END=52874362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:43:0,91,1480:0,91,255:40,0 chr1 52876787 . A . PASS END=52876872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,175,255:40,0 chr1 52878186 . A . PASS END=52878288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:32:0,90,1180:0,96,255:40,0 chr1 52878289 . A . PASS END=52878289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1230:0,62,255:29,0 chr1 52878290 . T . PASS END=52878296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1161:0,94,255:32,0 chr1 52879551 . T . PASS END=52879633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,102,255:40,0 chr1 52879634 . C . PASS END=52879657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:22:0,63,945:0,66,255:24,0 chr1 52879658 . C . PASS END=52879658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 52879659 . A . PASS END=52879660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 52879661 . A . PASS END=52879663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:18,0 chr1 52880293 . G . PASS END=52880293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:33,0 chr1 52880294 . C . PASS END=52880296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1280:0,105,255:35,0 chr1 52880297 . A . PASS END=52880297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1113:0,50,255:32,0 chr1 52880298 . G . PASS END=52880314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1160:0,81,255:38,0 chr1 52880315 . A . PASS END=52880315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1305:0,65,255:37,0 chr1 52880316 . G . PASS END=52880319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1253:0,103,255:38,0 chr1 52880413 . T . PASS END=52880531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,111,1551:0,113,255:40,0 chr1 52881010 . G . PASS END=52881058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,105,1575:0,116,255:40,0 chr1 52882320 . G . PASS END=52882362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,187,255:40,0 chr1 52889497 . T . PASS END=52889497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 52889498 . C . PASS END=52889506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,599:0,48,255:17,0 chr1 52889507 . T . PASS END=52889507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 52889508 . G . PASS END=52889512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:19,0 chr1 52889513 . A . PASS END=52889514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 52889515 . G . PASS END=52889516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,825:0,42,255:24,0 chr1 52889517 . A . PASS END=52889520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,881:0,61,255:26,0 chr1 52889521 . G . PASS END=52889522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr1 52889523 . C . PASS END=52889523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 52889524 . A . PASS END=52889585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:30:0,84,1064:0,84,255:40,0 chr1 52889607 . T . PASS END=52889659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:36:0,90,1350:0,108,255:40,0 chr1 52889660 . G . PASS END=52889660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:27,0 chr1 52889661 . G . PASS END=52889674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:31,0 chr1 52891021 . C . PASS END=52891022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 52891023 . T . PASS END=52891023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:29,0 chr1 52891024 . G . PASS END=52891162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,85,255:40,0 chr1 52891163 . T . PASS END=52891163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr1 52891164 . C . PASS END=52891170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 52891171 . A . PASS END=52891171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr1 52891172 . G . PASS END=52891175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 52891176 . G . PASS END=52891179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 52896685 . C . PASS END=52896691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr1 52896692 . C . PASS END=52896692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr1 52896693 . C . PASS END=52896696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 52896697 . C . PASS END=52896698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 52896699 . G . PASS END=52896699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 52896700 . C . PASS END=52896705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 52896706 . T . PASS END=52896722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,743:0,50,255:19,0 chr1 52896723 . G . PASS END=52896746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,715:0,60,255:25,0 chr1 52896747 . C . PASS END=52896747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 52896748 . C . PASS END=52896756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 52896757 . A . PASS END=52896757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:21,0 chr1 52896758 . C . PASS END=52896760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr1 52896761 . G . PASS END=52896832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1164:0,86,255:32,0 chr1 52896833 . G . PASS END=52896836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 52896837 . G . PASS END=52896840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 52896841 . T . PASS END=52896841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 52896842 . G . PASS END=52897116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:33:0,81,1215:0,95,255:40,0 chr1 52897117 . A . PASS END=52897132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:25,0 chr1 52901037 . A . PASS END=52901137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:34:0,96,1258:0,96,255:40,0 chr1 52902427 . C . PASS END=52902434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 52902435 . C . PASS END=52902451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 52902452 . G . PASS END=52902452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr1 52902453 . G . PASS END=52902462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:26,0 chr1 52902463 . C . PASS END=52902463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 52902464 . C . PASS END=52902497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr1 52902498 . C . PASS END=52902498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 52902499 . C . PASS END=52902500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 52902501 . C . PASS END=52902502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 52902503 . T . PASS END=52902503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:29,0 chr1 52902504 . A . PASS END=52902509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:30,0 chr1 52902510 . C . PASS END=52902510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 52902511 . A . PASS END=52902588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1156:0,80,255:39,0 chr1 52902589 . C . PASS END=52902589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1276:0,72,255:36,0 chr1 52902590 . T . PASS END=52902591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 52902592 . C . PASS END=52902592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1319:0,51,255:37,0 chr1 52902593 . T . PASS END=52902594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 52902595 . C . PASS END=52902595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1270:0,67,255:38,0 chr1 52902596 . A . PASS END=52902598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1330:0,84,255:40,0 chr1 52902599 . C . PASS END=52902600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:70:40:0,70,1168:0,70,255:37,0 chr1 52902601 . C . PASS END=52902618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1265:0,81,255:38,0 chr1 52902619 . T . PASS END=52902619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1232:0,72,255:31,0 chr1 52902620 . G . PASS END=52902630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,94,255:30,0 chr1 52902631 . T . PASS END=52902649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:25:0,63,945:0,65,255:26,0 chr1 52902650 . G . PASS END=52902650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 52903892 . C . PASS END=52903906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:33:0,86,1241:0,86,255:37,0 chr1 52903907 . C . PASS END=52903907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1031:0,66,255:35,0 chr1 52903908 . A . PASS END=52904007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,86,255:40,0 chr1 52911152 . T . PASS END=52911216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:35:0,92,1260:0,92,255:40,0 chr1 52911217 . T . PASS END=52911217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:78:52:0,78,1628:0,78,255:40,0 chr1 52911218 . G . PASS END=52911244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,117,1755:0,122,255:40,0 chr1 52911459 . A . PASS END=52911541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:35:0,91,1152:0,91,255:40,0 chr1 52911629 . T . PASS END=52911676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,161,255:40,0 chr1 52911937 . C . PASS END=52912079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:89:34:0,89,1185:0,89,255:40,0 chr1 52912080 . T . PASS END=52912114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,104,1620:0,104,255:40,0 chr1 52912262 . C . PASS END=52912339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,158,255:40,0 chr1 52924008 . C . PASS END=52924048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:32:0,96,1180:0,96,255:40,0 chr1 52924049 . G . PASS END=52924085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,125,255:40,0 chr1 52924086 . T C, 47.89 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=0.517;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:12,8,0:14,11,0:47:83,0,50,679,930,1609:255,0,255:25,0:4.7888e+01,9.2414e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,8,11:13,13,7,12 chr1 52924087 . A . PASS END=52924115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,99,1482:0,104,255:40,0 chr1 52924116 . A . PASS END=52924116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:32,0 chr1 52924117 . C . PASS END=52924121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1485:0,105,255:33,0 chr1 52926806 . C . PASS END=52926895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:41:0,108,1537:0,110,255:40,0 chr1 52927185 . C . PASS END=52927257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:97:51:0,97,1534:0,97,255:40,0 chr1 52927258 . G . PASS END=52927288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,200,255:40,0 chr1 52927384 . C . PASS END=52927441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:80:0,120,1800:0,173,255:40,0 chr1 52928952 . T . PASS END=52928952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 52928953 . T . PASS END=52928953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:38,0 chr1 52928954 . A . PASS END=52928998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:39:0,84,1410:0,84,255:40,0 chr1 52929235 . C . PASS END=52929424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:30:0,80,1125:0,80,255:40,0 chr1 52929425 . A . PASS END=52929425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:59:36:0,59,1214:0,59,255:27,0 chr1 52929426 . C . PASS END=52929428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1004:0,68,255:29,0 chr1 52929429 . T . PASS END=52929437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:32:0,85,1172:0,85,255:30,0 chr1 52929438 . C . PASS END=52929449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr1 52930742 . C . PASS END=52930845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,170,255:40,0 chr1 52933853 . C . PASS END=52933934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:40:0,99,1485:0,104,255:40,0 chr1 52933935 . C . PASS END=52933939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,77,255:25,0 chr1 52937624 . C . PASS END=52937766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:81:46:0,81,1215:0,135,255:40,0 chr1 52937767 . G . PASS END=52937774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:30:0,72,1080:0,90,255:26,0 chr1 52940504 . C . PASS END=52940827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:43:0,85,1372:0,85,255:40,0 chr1 52940828 . A . PASS END=52940828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1541:0,66,255:40,0 chr1 52940829 . G . PASS END=52940947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:93:43:0,93,1493:0,93,255:40,0 chr1 52940948 . C . PASS END=52940948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:55:46:0,55,1268:0,55,255:36,0 chr1 52940949 . T . PASS END=52941207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:33:0,83,1156:0,83,255:40,0 chr1 52943380 . C . PASS END=52943553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:31:0,81,1260:0,81,255:40,0 chr1 52943554 . A . PASS END=52943554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 52947095 . T . PASS END=52947305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:37:0,101,1262:0,101,255:40,0 chr1 52947306 . A . PASS END=52947307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,111,1665:0,147,255:37,0 chr1 52947476 . C . PASS END=52947595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:43:0,99,1485:0,129,255:40,0 chr1 52954581 . C . PASS END=52954707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1194:0,83,255:40,0 chr1 52956404 . C . PASS END=52956432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,158,255:40,0 chr1 52956433 . A . PASS END=52956473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,117,1755:0,164,255:40,0 chr1 52959283 . C . PASS END=52959291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:107:0,120,1800:0,255,255:40,0 chr1 52959292 . T . PASS END=52959334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,3:108:99:87:0,120,1800:0,196,255:40,0 chr1 52961099 . C . PASS END=52961187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,128,255:40,0 chr1 52962678 . C . PASS END=52962690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:37:0,84,1396:0,84,255:40,0 chr1 52962691 . C . PASS END=52962691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1441:0,68,255:39,0 chr1 52962692 . G . PASS END=52962838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:34:0,87,1244:0,97,255:40,0 chr1 52962839 . C . PASS END=52962842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 52962843 . C . PASS END=52962849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 52962850 . T . PASS END=52962850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 52962851 . T . PASS END=52962855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 52975268 . C . PASS END=52975384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,107,1381:0,107,255:40,0 chr1 52981515 . T . PASS END=52981695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:81:29:0,81,1064:0,83,255:40,1 chr1 52981696 . T . PASS END=52981703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:26,0 chr1 52981704 . A . PASS END=52981704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,933:0,53,255:20,0 chr1 52981705 . G . PASS END=52981705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 52981706 . A . PASS END=52981706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,931:0,45,255:20,0 chr1 52981707 . T . PASS END=52981707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 52981708 . T . PASS END=52981708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 52981709 . C . PASS END=52981726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,787:0,72,255:24,0 chr1 52991235 . T . PASS END=52991235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,836:0,20,255:22,0 chr1 52991236 . T . PASS END=52991239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 52991240 . T . PASS END=52991240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 52991241 . C . PASS END=52991242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 52991243 . T . PASS END=52991243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:24,0 chr1 52991244 . C . PASS END=52991250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 52991251 . G . PASS END=52991257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 52991258 . A . PASS END=52991258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 52991259 . T . PASS END=52991952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:80:31:0,80,1141:0,80,255:40,1 chr1 53068082 . A . PASS END=53068108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:11,0 chr1 53068109 . T . LowGQ END=53068111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 53068112 . C . PASS END=53068114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:13,0 chr1 53068115 . C . PASS END=53068116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 53068117 . C . PASS END=53068117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 53068118 . C . PASS END=53068133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:18,0 chr1 53068134 . G . PASS END=53068134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 53068135 . C . PASS END=53068143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 53068144 . G . PASS END=53068148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 53068149 . A . PASS END=53068149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 53068150 . G . PASS END=53068156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 53068157 . T . PASS END=53068157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 53068158 . A . PASS END=53068158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 53068159 . C . PASS END=53068159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 53068160 . G . PASS END=53068163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 53068164 . T . PASS END=53068164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 53068165 . C . PASS END=53068166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 53068167 . A . PASS END=53068167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 53068168 . G . PASS END=53068169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 53068170 . C . PASS END=53068170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 53068171 . G . PASS END=53068171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 53068172 . G . PASS END=53068175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 53068176 . A . PASS END=53068176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:22,0 chr1 53068177 . C . PASS END=53068177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 53068178 . A . PASS END=53068179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 53068180 . C . PASS END=53068183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 53068184 . G . PASS END=53068184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 53068185 . G . PASS END=53068186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 53068187 . A . PASS END=53068187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:18,0 chr1 53068188 . A . PASS END=53068188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53068189 . A . PASS END=53068189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,640:0,52,255:19,0 chr1 53068190 . C . PASS END=53068190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53068191 . T . PASS END=53068191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:19,0 chr1 53068192 . G . PASS END=53068193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 53068194 . T . PASS END=53068194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 53068195 . G . PASS END=53068195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 53068196 . T . PASS END=53068196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 53068197 . C . PASS END=53068197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 53068198 . G . PASS END=53068198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 53068199 . C . PASS END=53068199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr1 53068200 . T . PASS END=53068207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 53068208 . T . PASS END=53068209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,706:0,46,255:19,0 chr1 53068210 . C . PASS END=53068210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53068211 . C . PASS END=53068211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 53068212 . G . PASS END=53068212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53068213 . C . PASS END=53068219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 53072356 . G . PASS END=53072365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 53072366 . T . PASS END=53072388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:18,0 chr1 53072389 . G . LowGQ END=53072389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:17,0,255:18,0 chr1 53072390 . G . PASS END=53072390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 53072391 . C . PASS END=53072394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:21:20:0,21,690:0,21,255:21,0 chr1 53072395 . A . PASS END=53072395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 53072396 . C . PASS END=53072397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:21,0 chr1 53072398 . G . PASS END=53072400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,845:0,36,255:25,0 chr1 53072401 . C . PASS END=53072403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:26,0 chr1 53072404 . C . PASS END=53072404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 53072405 . A . PASS END=53072406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:26,0 chr1 53072407 . T . PASS END=53072407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 53072408 . A . PASS END=53072410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,909:0,45,255:26,0 chr1 53072411 . G . PASS END=53072411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 53072412 . A . PASS END=53072412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 53072413 . G . PASS END=53072413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 53072414 . C . PASS END=53072416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:27,0 chr1 53072417 . T . PASS END=53072417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 53072418 . G . PASS END=53072418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53072419 . C . PASS END=53072421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr1 53072422 . C . PASS END=53072422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 53072423 . A . PASS END=53072423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,948:0,38,255:29,0 chr1 53072424 . G . PASS END=53072426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr1 53072427 . G . PASS END=53072427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 53072428 . C . PASS END=53072428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 53072429 . A . PASS END=53072430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 53072431 . C . PASS END=53072431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:28,0 chr1 53072432 . G . PASS END=53072433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:28,0 chr1 53072434 . G . PASS END=53072434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 53072435 . A . PASS END=53072443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1073:0,60,255:32,0 chr1 53072444 . C . PASS END=53072444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 53072445 . C . PASS END=53072448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1288:0,69,255:33,0 chr1 53072449 . C . PASS END=53072449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 53072450 . A . PASS END=53072450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:32,0 chr1 53072451 . C . PASS END=53072451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1294:0,56,255:32,0 chr1 53072452 . T . PASS END=53072453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr1 53072454 . T C, 148.39 PASS DP=34;MQ=248.10;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:98:186,101,0,286,286,286:255,70,0:0,0:1.4839e+02,9.8386e+01,0.0000e+00,2.8316e+02,3.1793e+02,2.8617e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,16:0,0,21,13 chr1 53072455 . A . PASS END=53072455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 53072456 . A . PASS END=53072457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1160:0,69,255:34,0 chr1 53072458 . G . PASS END=53072458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 53072459 . T . PASS END=53072459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:34,0 chr1 53072460 . G . PASS END=53072466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1280:0,69,255:37,0 chr1 53072467 . T . PASS END=53072467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 53072468 . T . PASS END=53072468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr1 53072469 . C . PASS END=53072473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1443:0,82,255:37,0 chr1 53072474 . G . PASS END=53072474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr1 53072475 . C . PASS END=53072491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,107,1534:0,107,255:39,0 chr1 53072492 . A . PASS END=53072587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1180:0,86,255:40,0 chr1 53072588 . G . PASS END=53072589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 53072590 . G . PASS END=53072592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 53072593 . C . PASS END=53072607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr1 53072608 . T . PASS END=53072608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 53072609 . A . PASS END=53072617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 53073934 . A . PASS END=53073935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 53073936 . A . PASS END=53073936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,883:0,64,255:26,0 chr1 53073937 . C . PASS END=53073944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 53073945 . A . PASS END=53073945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 53073946 . A . PASS END=53074095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1086:0,81,255:40,0 chr1 53074096 . A . PASS END=53074097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 53098518 . A . PASS END=53098520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 53098521 . G . PASS END=53098525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 53098526 . T . PASS END=53098556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,327:0,30,255:13,0 chr1 53098557 . G . PASS END=53098557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 53098558 . A C, 88.67 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,8,0:0,6,0:39:126,42,0,506,42,506:255,42,0:0,0:8.8674e+01,3.8674e+01,5.8972e-04,4.5000e+02,7.3444e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,6:0,0,6,8 chr1 53098559 . T . PASS END=53098565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 53098566 . A . PASS END=53098573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53098574 . G . PASS END=53098574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 53098575 . C . PASS END=53098595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,488:0,39,255:13,0 chr1 53098596 . T . PASS END=53098599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 53098600 . T . PASS END=53098605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 53098606 . T . PASS END=53098621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 53098622 . A . LowGQ END=53098622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:10,0 chr1 53098623 . C . PASS END=53098665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr1 53098666 . C . PASS END=53098672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 53098673 . C . PASS END=53098679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 53098680 . G . PASS END=53098680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 53098681 . C . PASS END=53098703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 53098704 . C . PASS END=53098709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:9:0,12,180:0,27,255:5,0 chr1 53098710 . A T, 46.46 PASS DP=9;MQ=250.00;MQRankSum=2.054;ReadPosRankSum=0.573;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,3,0:0.333,0.000:9:6,2,0:0,1,0:46:81,0,50,99,199,298:81,0,190:4,0:4.6455e+01,1.1985e-04,5.3000e+01,9.9277e+01,2.3333e+02,3.0084e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,1,2:1,5,2,1 chr1 53098711 . G . PASS END=53098711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 53099166 . A . PASS END=53099188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:40:14:0,40,490:0,40,255:18,0 chr1 53099189 . C . PASS END=53099217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,784:0,63,255:26,0 chr1 53099218 . G . PASS END=53099231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 53099232 . C . PASS END=53099232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 53099233 . G . PASS END=53099249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 53099250 . G . PASS END=53099255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 53099256 . G . PASS END=53099282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:31,0 chr1 53099283 . A . PASS END=53099283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:30,0 chr1 53099284 . A . PASS END=53099324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1133:0,90,255:32,0 chr1 53099325 . C . PASS END=53099340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:26,0 chr1 53099341 . G . PASS END=53099347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:25:0,45,675:0,75,255:19,0 chr1 53108535 . C . PASS END=53108540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,785:0,66,255:23,0 chr1 53108541 . C . PASS END=53108541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:21,0 chr1 53108542 . G . PASS END=53108542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 53108543 . C . PASS END=53108543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,615:0,5,255:20,0 chr1 53108544 . T . PASS END=53108544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 53108545 . C . PASS END=53108545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,941:0,57,255:28,0 chr1 53108546 . T . PASS END=53108633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1125:0,80,255:40,0 chr1 53108634 . C . PASS END=53108656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,68,255:26,0 chr1 53108657 . T . PASS END=53108671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:18,0 chr1 53108672 . C . PASS END=53108674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 53114123 . A . PASS END=53114149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:95:34:0,95,1274:0,95,255:37,0 chr1 53114150 . G A, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.135;ReadPosRankSum=2.468;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,21,0:0.568,0.000:37:7,13,0:9,8,0:48:85,0,49,686,564,1250:255,0,255:16,0:5.0000e+01,7.2481e-05,5.1740e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,3,8,13:10,6,6,15 chr1 53114151 . A . PASS END=53114174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:36:0,89,1321:0,89,255:40,0 chr1 53114175 . C . PASS END=53114175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:63:49:0,63,1354:0,63,255:40,0 chr1 53114176 . C . PASS END=53114179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:49:0,80,1424:0,80,255:40,0 chr1 53114180 . A . PASS END=53114181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:66:48:0,66,1407:0,66,255:40,0 chr1 53114182 . C . PASS END=53114187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:47:0,110,1518:0,110,255:40,0 chr1 53114188 . T . PASS END=53114202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:46:0,108,1548:0,108,255:40,0 chr1 53114203 . T . PASS END=53114203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1519:0,74,255:40,0 chr1 53114204 . G . PASS END=53114272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:35:0,90,1350:0,92,255:40,0 chr1 53114273 . T . PASS END=53114273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:29,0 chr1 53114274 . A . PASS END=53114278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1058:0,83,255:30,0 chr1 53114279 . T . PASS END=53114279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 53114280 . T . PASS END=53114281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 53114282 . C . PASS END=53114282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 53114283 . A . PASS END=53114283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 53114284 . G . PASS END=53114284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:29,0 chr1 53114285 . C . PASS END=53114285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 53114286 . T . PASS END=53114286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 53114287 . A . PASS END=53114295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 53114296 . A . PASS END=53114296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 53114297 . G . PASS END=53114297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:29,0 chr1 53122462 . G . PASS END=53122472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr1 53122473 . G . PASS END=53122473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr1 53122474 . T . PASS END=53122492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,568:0,44,255:19,0 chr1 53122493 . T . PASS END=53122518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,729:0,60,255:26,0 chr1 53122519 . T . PASS END=53122522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 53122523 . A . PASS END=53122525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 53122526 . A . PASS END=53122528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53122529 . G . PASS END=53122537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 53122538 . C . PASS END=53122553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1019:0,87,255:29,0 chr1 53122554 . T . PASS END=53122554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 53122555 . G . PASS END=53122566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1100:0,87,255:29,0 chr1 53122567 . A . PASS END=53122567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 53122568 . G . PASS END=53122569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 53122570 . T . PASS END=53122570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 53122571 . G . PASS END=53122675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,994:0,87,255:38,0 chr1 53122676 . T . PASS END=53122679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:26,0 chr1 53122680 . C . PASS END=53122685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:30:0,57,855:0,77,255:19,0 chr1 53122686 . C . PASS END=53122686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 53122687 . C . PASS END=53122703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 53122704 . G . PASS END=53122712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 53153392 . T . PASS END=53153393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 53153394 . A . PASS END=53153394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 53153395 . C . PASS END=53153431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:28:0,81,980:0,84,255:38,0 chr1 53153432 . T C, 44.69 PASS DP=40;MQ=250.00;MQRankSum=5.224;ReadPosRankSum=3.241;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,15,0:0.375,0.000:40:14,8,0:11,7,0:44:79,0,50,534,857,1391:255,0,255:25,0:4.4689e+01,1.6930e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,8,7:15,10,7,8 chr1 53153433 . T . PASS END=53153469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,110,1482:0,110,255:40,0 chr1 53153470 . C . PASS END=53153527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1235:0,88,255:39,0 chr1 53153528 . C . PASS END=53153535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:25,0 chr1 53153536 . G . PASS END=53153553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,86,255:29,0 chr1 53153554 . G . PASS END=53153554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 53153555 . G . PASS END=53153557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 53153558 . T . PASS END=53153569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 53153570 . T . PASS END=53153603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1156:0,83,255:35,0 chr1 53153604 . G . PASS END=53153604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 53153605 . G . PASS END=53153740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1299:0,81,255:40,0 chr1 53153741 . A . PASS END=53153741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:32,0 chr1 53153742 . G . PASS END=53153759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1364:0,87,255:38,0 chr1 53153760 . C . PASS END=53153760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:34,0 chr1 53153761 . T . PASS END=53153796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:33:0,80,1215:0,80,255:37,0 chr1 53153797 . C . PASS END=53153797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:27,1 chr1 53153798 . A . PASS END=53153798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:32:0,61,1137:0,61,255:27,1 chr1 53153799 . A . PASS END=53153799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:28,0 chr1 53153800 . A . PASS END=53153812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:29,0 chr1 53153813 . G . PASS END=53153813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 53153814 . C . PASS END=53153815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 53153816 . G . PASS END=53153840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,776:0,66,255:25,0 chr1 53158398 . C . PASS END=53158413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1186:0,86,255:37,0 chr1 53158414 . A . PASS END=53158414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1280:0,62,255:35,0 chr1 53158415 . G . PASS END=53158539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:84:38:0,84,1341:0,84,255:40,0 chr1 53163893 . C . PASS END=53163893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr1 53163894 . G . PASS END=53163909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:23,0 chr1 53163910 . T . PASS END=53163910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 53163911 . G . PASS END=53163916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr1 53163917 . A . PASS END=53163917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 53163918 . G . PASS END=53163918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 53163919 . T . PASS END=53163930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr1 53163931 . T . PASS END=53163938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,1006:0,68,255:26,0 chr1 53163939 . C . PASS END=53163939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 53163940 . A . PASS END=53163940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1024:0,60,255:25,0 chr1 53163941 . T . PASS END=53163941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 53163942 . G . PASS END=53163943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1023:0,71,255:26,0 chr1 53163944 . T . PASS END=53163948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 53163949 . A . PASS END=53163949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 53163950 . A . PASS END=53163952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 53163953 . A . PASS END=53163982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,930:0,64,255:26,0 chr1 53163983 . C . PASS END=53163983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 53163984 . C . PASS END=53163984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 53163985 . A . PASS END=53163985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 53163986 . C . PASS END=53163988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 53163989 . T . PASS END=53163989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 53163990 . G . PASS END=53163991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 53163992 . C . PASS END=53163998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,56,255:18,0 chr1 53192326 . A . PASS END=53192344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,677:0,60,255:22,0 chr1 53192345 . G . PASS END=53192345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 53192346 . C . PASS END=53192351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 53192352 . C . PASS END=53192352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 53192353 . A . PASS END=53192355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 53222130 . G . PASS END=53222145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1014:0,68,255:25,0 chr1 53222146 . A . PASS END=53222263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:28:0,84,1039:0,84,255:40,0 chr1 53222264 . T . PASS END=53222264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 53222265 . G . PASS END=53222267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 53222268 . C . PASS END=53222295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,862:0,61,255:26,0 chr1 53236692 . G . PASS END=53236708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr1 53236709 . A . PASS END=53236709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 53236710 . C . PASS END=53236738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,553:0,48,255:19,0 chr1 53236739 . C . PASS END=53236744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 53236745 . A . PASS END=53236753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 53236754 . T . PASS END=53236754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:28,0 chr1 53236755 . G . PASS END=53237214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:29:0,83,1200:0,83,255:40,1 chr1 53237215 . T . PASS END=53237215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1502:0,74,255:37,0 chr1 53237216 . C . PASS END=53237348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:36:0,82,1440:0,82,255:40,0 chr1 53237349 . A . PASS END=53237349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr1 53237350 . A . PASS END=53237411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1152:0,89,255:40,0 chr1 53237412 . A . PASS END=53237432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,967:0,60,255:26,0 chr1 53237433 . A . PASS END=53237433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 53237434 . A . PASS END=53237446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,887:0,62,255:26,0 chr1 53245525 . G . PASS END=53245665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:35:0,83,1349:0,83,255:40,1 chr1 53250549 . C . PASS END=53250551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr1 53250552 . G . PASS END=53250564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:31,0 chr1 53250565 . T . PASS END=53250565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,935:0,59,255:29,0 chr1 53250566 . G . PASS END=53250612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:31:0,93,1163:0,93,255:40,0 chr1 53250613 . G . PASS END=53250649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,128,255:40,0 chr1 53250650 . G A, 182.43 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,18,0:0,27,0:132:220,135,0,1735,135,1735:255,135,0:0,0:1.8243e+02,1.3243e+02,0.0000e+00,4.5000e+02,1.6720e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,29:0,0,29,16 chr1 53250651 . A . PASS END=53250687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:37:0,96,1398:0,103,255:40,0 chr1 53250688 . T . PASS END=53250707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1260:0,87,255:32,0 chr1 53250708 . T . PASS END=53250725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 53255675 . T . PASS END=53255739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,120,255:40,0 chr1 53261964 . G . PASS END=53262063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:36:0,92,1278:0,92,255:40,0 chr1 53262406 . C . PASS END=53262456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,112,1800:0,112,255:40,0 chr1 53267491 . C . PASS END=53267493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 53267494 . C . PASS END=53267494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 53267495 . T . PASS END=53267496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:29:0,30,967:0,30,255:31,0 chr1 53267497 . C . PASS END=53267497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:32,0 chr1 53267498 . T . PASS END=53267504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1143:0,85,255:35,0 chr1 53267505 . A . PASS END=53267505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1225:0,64,255:33,0 chr1 53267506 . G . PASS END=53267520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,103,1390:0,103,255:40,0 chr1 53267521 . A . PASS END=53267652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,104,1615:0,104,255:40,0 chr1 53267764 . T . PASS END=53267811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,187,255:40,0 chr1 53271143 . G . PASS END=53271148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:85:0,120,1800:0,238,255:40,0 chr1 53279208 . A . PASS END=53279405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:34:0,85,1246:0,85,255:40,0 chr1 53279532 . C . PASS END=53279584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:38:0,94,1299:0,94,255:40,0 chr1 53282204 . G . PASS END=53282301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:96:44:0,96,1440:0,119,255:40,0 chr1 53287111 . C . PASS END=53287115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,637:0,43,255:19,0 chr1 53287116 . A . PASS END=53287117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 53287118 . G . PASS END=53287122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 53287123 . G . PASS END=53287124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 53287125 . A . PASS END=53287129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1080:0,90,255:30,0 chr1 53287130 . G . PASS END=53287130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 53287131 . C . PASS END=53287131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:29,0 chr1 53287132 . T . PASS END=53287228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1202:0,87,255:40,0 chr1 53287229 . C . PASS END=53287229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:30,0 chr1 53287230 . T . PASS END=53287233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1371:0,95,255:32,0 chr1 53287234 . A . PASS END=53287234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:29,0 chr1 53287235 . A . PASS END=53287247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:30,0 chr1 53287248 . C . PASS END=53287256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:23,0 chr1 53287257 . A . PASS END=53287265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,65,255:19,0 chr1 53287266 . C . PASS END=53287266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 53287267 . C . PASS END=53287267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 53287268 . C . PASS END=53287272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 53287273 . A . PASS END=53287273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,745:0,22,255:19,0 chr1 53287274 . A . PASS END=53287275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53287276 . A . PASS END=53287276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 53287277 . A . PASS END=53287277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53287278 . C . PASS END=53287282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 53287283 . C . PASS END=53287283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53287284 . C . PASS END=53287301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,43,255:18,0 chr1 53308556 . A . PASS END=53308565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 53308566 . T . PASS END=53308578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:16,0 chr1 53308579 . C . PASS END=53308579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 53308580 . C . PASS END=53308601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,553:0,48,255:19,0 chr1 53308602 . C . PASS END=53308605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 53308606 . T . PASS END=53308616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 53308617 . A . PASS END=53308619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53308620 . A . PASS END=53308622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 53308623 . C . PASS END=53308623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 53308624 . C . PASS END=53308635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:19,0 chr1 53308636 . C . PASS END=53308645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,41,255:13,0 chr1 53320137 . G . PASS END=53320140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 53320141 . A . PASS END=53320153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,654:0,60,255:26,0 chr1 53320154 . C . PASS END=53320159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 53320160 . G . PASS END=53320160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr1 53320161 . G . PASS END=53320236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1117:0,80,255:37,0 chr1 53320237 . T . PASS END=53320256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:33,0 chr1 53320257 . C . PASS END=53320273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:26,0 chr1 53320274 . G T, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=3.264;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:6,7,0:4,5,0:48:85,0,50,421,358,779:255,0,255:10,0:5.0000e+01,6.7304e-05,5.2606e+01,4.2109e+02,3.9246e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,5,7:7,3,6,6 chr1 53320275 . C . PASS END=53320283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 53320284 . A . PASS END=53320293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:18,0 chr1 53320294 . C . PASS END=53320298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 53320299 . C . PASS END=53320299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 53320300 . A . PASS END=53320302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:10,0 chr1 53322670 . G . PASS END=53322679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 53322680 . T . PASS END=53322684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 53322685 . G . PASS END=53322925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1141:0,81,255:40,0 chr1 53322926 . T . PASS END=53322926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1343:0,70,255:37,0 chr1 53322927 . T . PASS END=53322957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:37:0,81,1215:0,86,255:38,0 chr1 53322958 . G . PASS END=53322958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 53322959 . T . PASS END=53322965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:29,0 chr1 53322966 . A . PASS END=53322966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 53322967 . T . PASS END=53322971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 53322972 . A . PASS END=53322972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 53322973 . G . PASS END=53323349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1227:0,81,255:40,0 chr1 53323350 . A . PASS END=53323350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr1 53323351 . T . PASS END=53323378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1054:0,88,255:37,0 chr1 53323379 . T . PASS END=53323379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:29,0 chr1 53323380 . G . PASS END=53323381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:28,0 chr1 53323382 . T . PASS END=53323383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 53323384 . G . PASS END=53323399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 53323400 . T . PASS END=53323401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr1 53323402 . C . PASS END=53323403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 53323404 . A . PASS END=53323409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,812:0,53,255:19,0 chr1 53323410 . C . PASS END=53323410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 53323411 . A . PASS END=53323411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,659:0,16,255:17,0 chr1 53323412 . A . PASS END=53323419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:18,0 chr1 53323420 . G . PASS END=53323420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:14,0 chr1 53323421 . G . PASS END=53323421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 53326403 . G . PASS END=53326403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 53326404 . T . PASS END=53326404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 53326405 . T . PASS END=53326405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 53326406 . G . PASS END=53326407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 53326408 . T . PASS END=53326413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 53326414 . A . PASS END=53326414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 53326415 . G . PASS END=53326419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 53326420 . T . PASS END=53326420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr1 53326421 . A . PASS END=53326428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr1 53326429 . G . PASS END=53326431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:30,0 chr1 53326432 . T . PASS END=53326432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 53326433 . T . PASS END=53326446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1149:0,80,255:32,0 chr1 53326447 . C . PASS END=53326447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 53326448 . C . PASS END=53326493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:34:0,83,1350:0,83,255:39,0 chr1 53326494 . T . PASS END=53326494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:28,0 chr1 53326495 . G . PASS END=53326501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,92,255:30,0 chr1 53326502 . G . PASS END=53326502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:29,0 chr1 53326503 . A . PASS END=53326519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1233:0,99,255:33,0 chr1 53326520 . G . PASS END=53326539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,909:0,70,255:26,0 chr1 53326540 . A . PASS END=53326540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 53326541 . A . PASS END=53326541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 53326542 . A . PASS END=53326542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 53326543 . G . PASS END=53326543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 53329653 . C . PASS END=53329665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr1 53329666 . G . PASS END=53329666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 53329667 . A . PASS END=53329672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:23,0 chr1 53329673 . G . PASS END=53329673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 53329674 . A . PASS END=53329689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:26,0 chr1 53329690 . T . PASS END=53329691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 53329692 . C . PASS END=53329692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 53329693 . G . PASS END=53329720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1039:0,81,255:36,0 chr1 53329721 . T . PASS END=53329721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1086:0,77,255:35,0 chr1 53329722 . C . PASS END=53329757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:36:0,83,1288:0,83,255:37,0 chr1 53329758 . C . PASS END=53329758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:32,0 chr1 53329759 . C . PASS END=53329779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,94,255:35,0 chr1 53329780 . T . PASS END=53329780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 53329781 . C . PASS END=53329784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 53329785 . T . PASS END=53329785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 53329786 . G . PASS END=53329788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 53329789 . T . PASS END=53329817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,877:0,75,255:26,0 chr1 53329818 . C . PASS END=53329818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:22,0 chr1 53329819 . A . PASS END=53329819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 53329820 . T . PASS END=53329820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:21,0 chr1 53329821 . T . PASS END=53329825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 53329826 . G . PASS END=53329829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 53332175 . T . PASS END=53332239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,145,255:40,0 chr1 53333211 . G . PASS END=53333218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1311:0,108,255:37,0 chr1 53333219 . C . PASS END=53333219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:36,0 chr1 53333220 . T . PASS END=53333310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,110,1519:0,110,255:40,0 chr1 53333399 . C . PASS END=53333449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,129,255:40,0 chr1 53336827 . A . PASS END=53336850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,120,1800:0,157,255:40,0 chr1 53343354 . G . PASS END=53343533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:31:0,86,1255:0,86,255:40,0 chr1 53343597 . A . PASS END=53343641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:91:0,120,1800:0,255,255:40,0 chr1 53347143 . A . PASS END=53347146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 53347147 . A . PASS END=53347164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1150:0,80,255:32,0 chr1 53347165 . A . PASS END=53347165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,934:0,62,255:29,0 chr1 53347166 . G . PASS END=53347271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:33:0,85,1150:0,85,255:40,0 chr1 53347272 . C . PASS END=53347272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:37,0 chr1 53347273 . T . PASS END=53347312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1200:0,83,255:39,0 chr1 53347313 . G . PASS END=53347330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:24,0 chr1 53347331 . A . PASS END=53347337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,52,255:19,0 chr1 53351505 . C . PASS END=53351549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:99:44:0,112,1755:0,112,255:40,0 chr1 53351550 . G . PASS END=53351550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:78:53:0,78,1502:0,78,255:40,0 chr1 53351551 . C . PASS END=53351551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr1 53351552 . A . PASS END=53351566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,108,1620:0,130,255:40,0 chr1 53352628 . A . PASS END=53352715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:31:0,81,1215:0,84,255:40,0 chr1 53352716 . A . PASS END=53352725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 53358454 . C . PASS END=53358460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:19,0 chr1 53358461 . A . PASS END=53358473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,671:0,63,255:22,0 chr1 53358474 . T . PASS END=53358474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 53358475 . T . PASS END=53358477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 53358478 . T . PASS END=53358478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:20,0 chr1 53358479 . T . PASS END=53358507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,754:0,66,255:26,0 chr1 53358508 . A . PASS END=53358598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:32:0,93,1250:0,94,255:40,0 chr1 53358599 . G . PASS END=53358606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 53358607 . C . PASS END=53358607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 53358608 . T . PASS END=53358629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 53362192 . T . PASS END=53362269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1260:0,84,255:40,0 chr1 53363109 . C . PASS END=53363156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,105,1668:0,105,255:40,0 chr1 53364252 . C . PASS END=53364258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:24,0 chr1 53364259 . G . PASS END=53364259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 53364260 . G . PASS END=53364271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:27,0 chr1 53364272 . G . PASS END=53364426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:30:0,86,1041:0,86,255:40,0 chr1 53364846 . C . PASS END=53364857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 53364858 . G . PASS END=53364858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 53364859 . T . PASS END=53364866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 53364867 . T . PASS END=53364867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 53364868 . A . PASS END=53364870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 53364871 . T . PASS END=53364871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:26,0 chr1 53364872 . T . PASS END=53364881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 53364882 . C . PASS END=53364896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 53370318 . C . PASS END=53370353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,521:0,41,255:19,0 chr1 53370354 . C . PASS END=53370372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,737:0,60,255:25,0 chr1 53370373 . T . PASS END=53370378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 53370379 . T . PASS END=53370379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 53370380 . T . PASS END=53370395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 53370396 . A . PASS END=53370406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 53370407 . C . PASS END=53370407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53370408 . C . PASS END=53370416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 53370417 . G . PASS END=53370417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:22,0 chr1 53370418 . G . PASS END=53370425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 53370426 . T . PASS END=53370426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 53370427 . C . PASS END=53370429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 53370430 . C . PASS END=53370433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 53370434 . G . PASS END=53370442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 53370443 . C . PASS END=53370444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 53370445 . G . PASS END=53370448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 53370449 . A . PASS END=53370449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 53370450 . G . PASS END=53370455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:21,0 chr1 53370456 . C . PASS END=53370490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 53370491 . G . PASS END=53370505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:13,0 chr1 53370706 . C . PASS END=53370736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,887:0,72,255:26,0 chr1 53370737 . A . PASS END=53370737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 53370738 . A . PASS END=53370738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 53370739 . T . PASS END=53370762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1187:0,90,255:33,0 chr1 53372191 . C . PASS END=53372209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 53372210 . G . PASS END=53372210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 53372211 . G . PASS END=53372214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,868:0,69,255:24,0 chr1 53372215 . G . PASS END=53372218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 53372219 . A . PASS END=53372220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 53372221 . G . PASS END=53372230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 53372231 . T . PASS END=53372245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 53372246 . C . PASS END=53372261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:28,0 chr1 53372262 . A . PASS END=53372283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 53373540 . C . PASS END=53373540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 53373541 . G . PASS END=53373541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:28,0 chr1 53373542 . A . PASS END=53373542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 53373543 . T . PASS END=53373547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr1 53373548 . T . PASS END=53373548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 53373549 . T . PASS END=53373552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 53373553 . C . PASS END=53373553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 53373554 . A . PASS END=53373560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1042:0,90,255:31,0 chr1 53373561 . G . PASS END=53373561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 53373562 . G . PASS END=53373562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 53373563 . A . PASS END=53373563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 53373564 . G . PASS END=53373569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 53373570 . G . PASS END=53373570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 53373571 . G . PASS END=53373573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 53373574 . A . PASS END=53373574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 53373575 . A . PASS END=53373576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 53373577 . C . PASS END=53373577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 53373578 . A . PASS END=53373578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 53373579 . C . PASS END=53373579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 53373580 . C . PASS END=53373601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:32,0 chr1 53373602 . T . PASS END=53373605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 53373606 . C . PASS END=53373609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1155:0,80,255:27,0 chr1 53373610 . C . PASS END=53373626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,939:0,62,255:26,0 chr1 53377238 . C . PASS END=53377238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 53377239 . T . PASS END=53377239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 53377240 . G . PASS END=53377241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,880:0,42,255:26,0 chr1 53377242 . A . PASS END=53377242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 53377243 . C . PASS END=53377244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:26,0 chr1 53377245 . G . PASS END=53377247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 53377248 . C . PASS END=53377248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr1 53377249 . A . PASS END=53377250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 53377251 . G . PASS END=53377252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 53377253 . C . PASS END=53377253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 53377254 . C . PASS END=53377256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1029:0,60,255:30,0 chr1 53377257 . C . PASS END=53377259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 53377260 . T . PASS END=53377260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 53377261 . C . PASS END=53377262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 53377263 . A . PASS END=53377263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 53377264 . C . PASS END=53377264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 53377265 . T . PASS END=53377265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:30,0 chr1 53377266 . T . PASS END=53377271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 53377272 . G . PASS END=53377272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:31,0 chr1 53377273 . A . PASS END=53377280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1133:0,80,255:32,0 chr1 53377281 . A . PASS END=53377281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:28,0 chr1 53377282 . C . PASS END=53377282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:29,0 chr1 53377283 . G . PASS END=53377283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:29,0 chr1 53377284 . C . PASS END=53377286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 53377287 . T . PASS END=53377325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,939:0,64,255:26,0 chr1 53377395 . C . PASS END=53377409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 53377410 . A . PASS END=53377410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 53377411 . T . PASS END=53377413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53377414 . C . PASS END=53377414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 53377415 . C . PASS END=53377425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 53377426 . C . PASS END=53377426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 53377427 . G . PASS END=53377428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 53377429 . G . PASS END=53377429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 53377430 . C . PASS END=53377435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 53377436 . G . PASS END=53377457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,662:0,41,255:19,0 chr1 53377458 . G . PASS END=53377459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 53377460 . T . PASS END=53377462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 53379739 . T . PASS END=53379742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,970:0,67,255:26,0 chr1 53379743 . G . PASS END=53379744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53379745 . C . PASS END=53379745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr1 53379746 . C . PASS END=53379746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 53379747 . T . PASS END=53379747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 53379748 . G . PASS END=53379749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:28,0 chr1 53379750 . C . PASS END=53379750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 53379751 . C . PASS END=53379751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 53379752 . T . PASS END=53379752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 53379753 . C . PASS END=53379753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 53379754 . A . PASS END=53379755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 53379756 . G . PASS END=53379761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 53379762 . T . PASS END=53379762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:25,0 chr1 53379763 . A . PASS END=53379764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 53379765 . A . PASS END=53379765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53379766 . G . PASS END=53379766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 53379767 . C . PASS END=53379767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53380939 . T . PASS END=53380964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1311:0,97,255:37,0 chr1 53383277 . T . PASS END=53383287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,135,255:40,0 chr1 53387155 . C . PASS END=53387172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr1 53387173 . C . PASS END=53387177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 53387178 . G . PASS END=53387183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 53387184 . T . PASS END=53387192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 53387193 . C . PASS END=53387243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1117:0,82,255:31,0 chr1 53387244 . G . PASS END=53387245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 53387246 . C . PASS END=53387247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53387248 . C . PASS END=53387249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 53387250 . C . PASS END=53387250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 53387251 . A . PASS END=53387280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr1 53387281 . T . PASS END=53387281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 53387282 . C . PASS END=53387303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 53387304 . A . PASS END=53387321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:18:0,48,720:0,53,255:18,0 chr1 53387322 . C . PASS END=53387322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 53387323 . A . PASS END=53387341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 53387342 . G . PASS END=53387344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 53387345 . T . PASS END=53387345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 53393069 . A . PASS END=53393070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 53393071 . G . PASS END=53393083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1062:0,87,255:31,0 chr1 53393084 . T . PASS END=53393084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1078:0,57,255:30,0 chr1 53393085 . G . PASS END=53393130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1111:0,82,255:33,0 chr1 53393131 . G . PASS END=53393137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 53407468 . T . PASS END=53407525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:63:0,120,1800:0,155,255:40,0 chr1 53413681 . G . PASS END=53413752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:50:0,120,1800:0,143,255:40,0 chr1 53416427 . G . PASS END=53416428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 53416429 . G . PASS END=53416558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:28:0,84,1033:0,84,255:40,0 chr1 53420412 . G . PASS END=53420476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:66:0,120,1800:0,180,255:40,0 chr1 53427175 . T . PASS END=53427178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53427179 . C . PASS END=53427179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 53427180 . A . PASS END=53427301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:31:0,80,1121:0,80,255:40,0 chr1 53440441 . G . PASS END=53440504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:102:0,120,1800:0,255,255:40,0 chr1 53442355 . G . PASS END=53442441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,1:121:99:88:0,120,1800:0,241,255:40,0 chr1 53443889 . T . PASS END=53444040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,114,1474:0,116,255:40,0 chr1 53446068 . G . PASS END=53446215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:93:48:0,93,1395:0,140,255:40,0 chr1 53453701 . G . PASS END=53453713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:34:0,102,1258:0,102,255:40,0 chr1 53453714 . G T, 48.80 PASS DP=42;MQ=250.00;MQRankSum=5.425;ReadPosRankSum=-0.828;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,18,0:0.439,0.000:41:14,11,0:9,7,0:47:84,0,50,636,794,1430:255,0,255:23,0:4.8801e+01,7.8953e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,7,12,6:15,8,13,5 chr1 53453715 . C . PASS END=53453751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,117,1641:0,119,255:40,0 chr1 53453752 . G . PASS END=53453808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:38:0,84,1260:0,90,255:40,0 chr1 53458930 . G . PASS END=53458949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:111:0,120,1800:0,255,255:40,0 chr1 53468460 . G . PASS END=53468578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:51:0,120,1800:0,153,255:40,0 chr1 53480562 . G . PASS END=53480706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1048:0,87,255:40,0 chr1 53480707 . A . PASS END=53480710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 53480711 . G . PASS END=53480711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr1 53480712 . C . PASS END=53480715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:25,0 chr1 53493641 . T . PASS END=53493743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:42:0,120,1800:0,126,255:40,0 chr1 53504589 . G . PASS END=53504704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:35:0,85,1350:0,85,255:40,0 chr1 53504705 . G . PASS END=53504718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,990:0,81,255:26,0 chr1 53513520 . T . PASS END=53513520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 53513530 . A . PASS END=53513639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,114,1710:0,122,255:40,0 chr1 53516281 . G . PASS END=53516376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,105,1471:0,105,255:40,0 chr1 53527892 . A . PASS END=53527900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1360:0,111,255:37,0 chr1 53527901 . G . PASS END=53527901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1192:0,61,255:34,0 chr1 53527902 . C . PASS END=53527907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1296:0,94,255:37,0 chr1 53527908 . C . PASS END=53527908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:36,0 chr1 53527909 . C . PASS END=53527910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:37,0 chr1 53527911 . G . PASS END=53527937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:37,0 chr1 53527938 . G . PASS END=53527945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr1 53527946 . C . PASS END=53527947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:18,0 chr1 53527948 . T G, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=1.244;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:9,8,0:3,7,0:48:85,0,49,536,413,949:255,0,255:10,0:5.0000e+01,6.9116e-05,5.2273e+01,4.5000e+02,4.4853e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,10,6,9:5,7,9,6 chr1 53527949 . G . PASS END=53527959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,69,255:19,0 chr1 53527960 . C . PASS END=53527961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53527962 . C . PASS END=53527977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,53,255:19,0 chr1 53527978 . C . PASS END=53527980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:12,0 chr1 53532478 . A . PASS END=53532539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:69:0,120,1800:0,148,255:40,0 chr1 53535473 . G . PASS END=53535477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 53535478 . G A, 41.37 PASS DP=13;MQ=248.17;MQRankSum=0.761;ReadPosRankSum=-0.930;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,3,0:0.231,0.000:13:4,3,0:6,0,0:41:76,0,50,107,358,465:77,0,255:9,0:4.1366e+01,3.3886e-04,5.3000e+01,1.0733e+02,3.9240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,2,1:5,5,2,1:53535478 chr1 53535479 . T . PASS END=53535494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,419:0,36,255:12,0 chr1 53535495 . G . PASS END=53535495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 53535496 . G . PASS END=53535498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 53535499 . C T, 50.00 PASS DP=13;MQ=248.17;MQRankSum=2.700;ReadPosRankSum=1.774;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:4,9,0:0.692,0.000:13:3,4,0:1,5,0:46:85,0,46,322,143,465:255,0,116:4,0:5.0000e+01,1.0173e-04,4.8715e+01,3.2188e+02,1.7778e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,5,4:2,2,4,5:53535478 chr1 53535500 . A . PASS END=53535516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 53535517 . C . PASS END=53535526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 53535527 . C . PASS END=53535532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 53535533 . C . PASS END=53535534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 53535535 . A . PASS END=53535535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:14,0 chr1 53535536 . G . PASS END=53535536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 53535537 . A . PASS END=53535545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,41,255:13,0 chr1 53535546 . C . PASS END=53535546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 53535547 . T . PASS END=53535547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 53535548 . G . PASS END=53535548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 53535549 . C . PASS END=53535580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr1 53535581 . C . PASS END=53535591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 53535592 . T . PASS END=53535592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 53535593 . G . PASS END=53535593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 53535594 . C . PASS END=53535595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53535596 . T . PASS END=53535629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,629:0,45,255:17,0 chr1 53535630 . G . PASS END=53535630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 53535631 . G . PASS END=53535667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,546:0,40,255:19,0 chr1 53535668 . G . PASS END=53535669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 53535670 . A . PASS END=53535691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 53535692 . C . PASS END=53535700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 53535701 . G . PASS END=53535701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 53535702 . C . PASS END=53535729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 53535730 . G . PASS END=53535811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,582:0,48,255:19,0 chr1 53535812 . T . PASS END=53535812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 53535813 . G . PASS END=53535831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 53535832 . C . PASS END=53535839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 53537207 . A . PASS END=53537214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,582:0,51,255:18,0 chr1 53537215 . G . PASS END=53537215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 53537216 . C . PASS END=53537223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 53537224 . G . PASS END=53537228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,719:0,66,255:22,0 chr1 53537229 . A . PASS END=53537240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,779:0,69,255:23,0 chr1 53537241 . T . PASS END=53537241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,689:0,36,255:19,0 chr1 53537242 . C . PASS END=53537254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:21,0 chr1 53537255 . C . PASS END=53537255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 53537256 . G . PASS END=53537262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 53537263 . G . PASS END=53537263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 53537264 . A . PASS END=53537265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53537266 . G A, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=1.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,12,0:0.522,0.000:23:8,5,0:3,7,0:48:85,0,50,428,393,821:255,0,255:10,0:5.0000e+01,6.5751e-05,5.2907e+01,4.2767e+02,4.2812e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,5,7:6,5,6,6 chr1 53537267 . C . PASS END=53537268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 53537269 . G . PASS END=53537300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 53540278 . G . PASS END=53540292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,99,1637:0,99,255:40,0 chr1 53540293 . C . PASS END=53540293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1559:0,66,255:40,0 chr1 53540294 . G . PASS END=53540326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:45:0,96,1550:0,96,255:40,0 chr1 53540327 . C . PASS END=53540327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1434:0,66,255:40,0 chr1 53540328 . T . PASS END=53540342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:98:42:0,98,1393:0,98,255:40,0 chr1 53541534 . C . PASS END=53541609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1172:0,85,255:35,0 chr1 53541610 . A . PASS END=53541639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,870:0,72,255:26,0 chr1 53541640 . T . PASS END=53541643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,55,255:18,0 chr1 53542862 . G . PASS END=53542868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,790:0,63,255:25,0 chr1 53542869 . T . PASS END=53542870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 53542871 . C . PASS END=53542874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:65:27:0,65,961:0,65,255:28,0 chr1 53542875 . C . PASS END=53542875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 53542876 . A . PASS END=53542876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 53542877 . C . PASS END=53542881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 53542882 . A . PASS END=53542882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 53542883 . C . PASS END=53542883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 53542884 . A . PASS END=53542886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 53542887 . C . PASS END=53542887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 53542888 . T . PASS END=53542890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 53542891 . C . PASS END=53542891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 53542892 . A . PASS END=53542892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 53542893 . G . PASS END=53542893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 53542894 . A . PASS END=53542894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,978:0,32,255:29,0 chr1 53542895 . C . PASS END=53542898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr1 53542899 . G . PASS END=53542899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:31,0 chr1 53542900 . G . PASS END=53542900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1233:0,99,255:33,0 chr1 53542901 . G . PASS END=53542901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:31,0 chr1 53542902 . C . PASS END=53542994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:30:0,80,1093:0,80,255:39,0 chr1 53542995 . G . PASS END=53543018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,898:0,62,255:26,0 chr1 53543357 . A . PASS END=53543374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,787:0,72,255:25,0 chr1 53543375 . A . PASS END=53543375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 53543376 . T . PASS END=53543378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 53543379 . C . PASS END=53543379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 53543380 . C . PASS END=53543390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,947:0,62,255:25,0 chr1 53543391 . T . PASS END=53543423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1055:0,84,255:34,0 chr1 53543424 . T . PASS END=53543424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1202:0,58,255:32,0 chr1 53543425 . G . PASS END=53543426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1213:0,88,255:34,0 chr1 53543427 . A . PASS END=53543427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1173:0,66,255:33,0 chr1 53543428 . G . PASS END=53543447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:34,0 chr1 53543448 . A . PASS END=53543452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:65:33:0,65,898:0,65,255:26,0 chr1 53543453 . C . PASS END=53543453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:26,0 chr1 53543454 . T . PASS END=53543468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,76,255:26,0 chr1 53543469 . T . PASS END=53543470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:56:24:0,56,853:0,56,255:19,0 chr1 53543471 . T . PASS END=53543471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 53543472 . G . PASS END=53543472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 53544037 . G . PASS END=53544051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 53544052 . G . PASS END=53544052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 53544053 . G . PASS END=53544062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:18,0 chr1 53544063 . A . PASS END=53544063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 53544064 . T . PASS END=53544065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,653:0,41,255:18,0 chr1 53544066 . T . PASS END=53544066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:18,0 chr1 53544067 . G . PASS END=53544069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 53544070 . C . PASS END=53544080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,786:0,63,255:22,0 chr1 53544081 . T . PASS END=53544081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:21,0 chr1 53544082 . G . PASS END=53544084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 53544085 . T . PASS END=53544085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 53544086 . C . PASS END=53544096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:25,0 chr1 53544097 . T . PASS END=53544097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,873:0,45,255:22,0 chr1 53544098 . G . PASS END=53544106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 53544107 . C . PASS END=53544107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:21,0 chr1 53544108 . G . PASS END=53544108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:20,0 chr1 53544109 . C . PASS END=53544109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:21,0 chr1 53544110 . A . PASS END=53544110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:21,0 chr1 53544111 . G . PASS END=53544120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1008:0,71,255:27,0 chr1 53544121 . G . PASS END=53544123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 53544124 . G . PASS END=53544124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 53544125 . C . PASS END=53544131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 53544132 . A . PASS END=53544132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 53544133 . G . PASS END=53544136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 53544137 . A . PASS END=53544137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,968:0,70,255:28,0 chr1 53544138 . A . PASS END=53544158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:30,0 chr1 53544159 . C . PASS END=53544161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1124:0,77,255:26,0 chr1 53544162 . A . PASS END=53544173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 53544174 . C . PASS END=53544174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:26,0 chr1 53544175 . C . PASS END=53544180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:28,0 chr1 53544181 . C . PASS END=53544191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1053:0,71,255:26,0 chr1 53544192 . A . PASS END=53544192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 53544193 . C . PASS END=53544218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,930:0,62,255:25,0 chr1 53544219 . G . PASS END=53544219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 53544220 . G . PASS END=53544220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 53544221 . G . PASS END=53544221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 53544222 . A . PASS END=53544225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 53544226 . G . PASS END=53544228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 53544229 . C . PASS END=53544229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:17,0 chr1 53544230 . A . PASS END=53544258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,675:0,41,255:19,0 chr1 53544259 . G . PASS END=53544259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 53544260 . C . PASS END=53544260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:13,0 chr1 53544261 . G . PASS END=53544261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 53544262 . G . PASS END=53544277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:15,0 chr1 53544278 . C . PASS END=53544279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 53544280 . G . PASS END=53544280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 53544281 . T . PASS END=53544284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,551:0,12,255:15,0 chr1 53544285 . A . PASS END=53544296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 53544297 . A . PASS END=53544297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 53544298 . G . PASS END=53544323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 53544324 . G . PASS END=53544325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 53544326 . G . PASS END=53544327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 53544328 . G . PASS END=53544328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 53544329 . C . PASS END=53544334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:19,0 chr1 53544335 . C . PASS END=53544338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 53544339 . T . PASS END=53544339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 53544340 . G . PASS END=53544342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 53544343 . C . PASS END=53544343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 53544344 . C . PASS END=53544358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 53544359 . A . PASS END=53544365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr1 53544366 . T . PASS END=53544366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:18,0 chr1 53544367 . T . PASS END=53544384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 53544385 . C . PASS END=53544388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 53544389 . A . PASS END=53544389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 53544390 . C . PASS END=53544393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 53544394 . C . PASS END=53544395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 53544396 . T . PASS END=53544400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53544401 . G . PASS END=53544401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 53544402 . A . PASS END=53544411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 53544412 . C . PASS END=53544421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 53544422 . A . PASS END=53544438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr1 53544439 . G A, 49.52 PASS DP=18;MQ=250.00;MQRankSum=3.510;ReadPosRankSum=2.621;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,8,0:0.444,0.000:18:3,3,0:7,5,0:48:84,0,50,286,358,644:255,0,255:10,0:4.9516e+01,7.0410e-05,5.3000e+01,2.8603e+02,3.9238e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,3,5:3,7,4,4 chr1 53544440 . C . PASS END=53544471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 53544472 . C . PASS END=53544472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 53544473 . C . PASS END=53544476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 53544477 . T . PASS END=53544493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:16,0 chr1 53544494 . T . PASS END=53544503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 53544504 . G . PASS END=53544507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:9,0 chr1 53544508 . G . PASS END=53544509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 53544510 . A . PASS END=53544510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 53544511 . C . PASS END=53544511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 53544512 . A . PASS END=53544512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 53544513 . C . PASS END=53544515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 53544516 . T . PASS END=53544540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 53544541 . C . PASS END=53544550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 53544551 . A . PASS END=53544561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 53544562 . C . PASS END=53544567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 53544568 . G . PASS END=53544569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 53544570 . T . PASS END=53544577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 53544578 . T C, 50.00 PASS DP=6;MQ=250.00;MQRankSum=1.380;ReadPosRankSum=1.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,4,0:0.667,0.000:6:1,1,0:1,3,0:45:85,0,44,143,64,207:143,0,49:2,0:5.0000e+01,1.3047e-04,4.6981e+01,1.4299e+02,9.8273e+01,2.0950e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,2,2:1,1,3,1 chr1 53544579 . T . PASS END=53544587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:8,0 chr1 53544588 . G . PASS END=53544588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 53544589 . G . PASS END=53544589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 53544590 . G . PASS END=53544590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 53544591 . C . PASS END=53544591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 53544592 . G . PASS END=53544596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 53544597 . T C, 68.14 PASS DP=7;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,2,0:0,5,0:18:106,21,0,271,21,271:255,24,0:0,0:6.8135e+01,1.8135e+01,6.7260e-02,2.6842e+02,5.2905e+01,2.7142e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,5:0,0,3,4 chr1 53544598 . G . PASS END=53544600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 53544601 . C . PASS END=53544601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 53544602 . A . PASS END=53544605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,227:6,0 chr1 53544606 . C . PASS END=53544607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 53544608 . C . PASS END=53544613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 53544614 . C . PASS END=53544614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 53544615 . G . PASS END=53544632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:6:0,11,225:0,11,219:6,0 chr1 53544633 . G . PASS END=53544633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 53544634 . C . PASS END=53544634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 53544635 . A . PASS END=53544646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 53544647 . A . PASS END=53544647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 53544648 . G . PASS END=53544675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr1 53544676 . G . PASS END=53544676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 53544677 . G . PASS END=53544694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 53546400 . C . PASS END=53546422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 53546423 . G . PASS END=53546426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 53546427 . A . PASS END=53546427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 53546428 . C . PASS END=53546526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1215:0,80,255:40,0 chr1 53546527 . A . PASS END=53546527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:28,0 chr1 53546528 . C . PASS END=53546537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1147:0,83,255:30,0 chr1 53546538 . A . PASS END=53546538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 53546539 . T . PASS END=53546542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1020:0,93,255:31,0 chr1 53546543 . T . PASS END=53546543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr1 53546544 . C . PASS END=53546548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1224:0,83,255:31,0 chr1 53547653 . G . PASS END=53547801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:95:52:0,95,1800:0,95,255:40,6 chr1 53547802 . A . PASS END=53547802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,8:101:61:101:0,61,2974:0,61,255:40,6 chr1 53547803 . G . PASS END=53547833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:83:82:0,83,1800:0,83,255:40,6 chr1 53553681 . T . PASS END=53553687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 53553688 . T . PASS END=53553688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:17,0 chr1 53553689 . T . PASS END=53553701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:18,0 chr1 53553702 . A G, 100.71 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,12,0:0,6,0:51:138,54,0,668,54,668:255,54,0:0,0:1.0071e+02,5.0713e+01,3.6758e-05,4.5000e+02,8.5483e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,9:0,0,9,9 chr1 53553703 . C . PASS END=53553704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 53553705 . G . PASS END=53553709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 53553710 . G . PASS END=53553710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 53553711 . G . PASS END=53553720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,930:0,69,255:25,0 chr1 53553721 . T . PASS END=53553722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 53553723 . G . PASS END=53553753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr1 53553754 . T C, 49.84 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=0.789;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:6,9,0:7,3,0:48:85,0,50,364,465,828:255,0,255:12,0:4.9843e+01,6.6786e-05,5.3000e+01,3.6353e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,1,11:4,9,4,8 chr1 53553755 . G . PASS END=53553766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 53553767 . C . PASS END=53553770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 53553771 . G . PASS END=53553772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53553773 . C . PASS END=53553773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 53553774 . G . PASS END=53553774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 53553775 . T . PASS END=53553776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 53553777 . G . PASS END=53553777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:17,0 chr1 53553778 . T . PASS END=53553780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 53553781 . G . PASS END=53553787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 53553788 . T . PASS END=53553790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 53553791 . G . PASS END=53553791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 53553792 . G . PASS END=53553797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 53553798 . G . PASS END=53553798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 53553799 . G . PASS END=53553811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 53553812 . C . PASS END=53553814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 53553815 . C . PASS END=53553848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:25,0 chr1 53553849 . T . PASS END=53553849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 53553850 . G . PASS END=53553855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 53553856 . A . PASS END=53553857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 53553858 . C . PASS END=53553870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,784:0,63,255:21,0 chr1 53553871 . A . PASS END=53553871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr1 53553872 . C . PASS END=53553875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 53553876 . C . PASS END=53553876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 53553877 . T . PASS END=53553880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 53553881 . T . PASS END=53553881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr1 53553882 . C . PASS END=53553910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 53553911 . A . PASS END=53553918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 53554549 . C . PASS END=53554576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,102,1460:0,108,255:40,0 chr1 53554577 . T . PASS END=53554651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1260:0,97,255:40,0 chr1 53555472 . A . PASS END=53555482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:17,0 chr1 53555483 . A . PASS END=53555484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 53555485 . C . PASS END=53555487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 53555488 . C . PASS END=53555488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 53555489 . A . PASS END=53555489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 53555490 . A . PASS END=53555490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 53555491 . T . PASS END=53555496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 53555497 . G . PASS END=53555549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr1 53555550 . A . PASS END=53555550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 53555551 . C . PASS END=53555556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,792:0,66,255:22,0 chr1 53555557 . C . PASS END=53555581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,676:0,54,255:19,0 chr1 53555582 . A . PASS END=53555582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 53555583 . A . PASS END=53555585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 53555586 . C . PASS END=53555586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 53555587 . T . PASS END=53555589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 53555590 . C . PASS END=53555591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 53555592 . G . PASS END=53555594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 53555595 . G . PASS END=53555606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr1 53556284 . C . PASS END=53556333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr1 53556334 . G . PASS END=53556351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:17,0 chr1 53556352 . A . PASS END=53556352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:14,0 chr1 53556353 . G . PASS END=53556353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:15,0 chr1 53556354 . C . PASS END=53556367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,584:0,51,255:18,0 chr1 53556368 . G . PASS END=53556376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 53556377 . A . PASS END=53556377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:19,0 chr1 53556378 . T . PASS END=53556386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,663:0,60,255:21,0 chr1 53556387 . T . PASS END=53556387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:19,0 chr1 53556388 . G . PASS END=53556392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53556393 . C . PASS END=53556397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,743:0,50,255:20,0 chr1 53556398 . G . PASS END=53556418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:24,0 chr1 53556419 . C . PASS END=53556419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 53556420 . G . PASS END=53556423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 53556424 . G . PASS END=53556424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 53556425 . T . PASS END=53556430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 53556431 . T . PASS END=53556431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:23,0 chr1 53556432 . G . PASS END=53556434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 53556435 . T . PASS END=53556435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 53556436 . G . PASS END=53556437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 53556438 . T . PASS END=53556438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 53556439 . C . PASS END=53556444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 53556445 . C . PASS END=53556445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 53556446 . A . PASS END=53556450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 53556451 . C . PASS END=53556451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 53556452 . T . PASS END=53556452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 53556453 . T . PASS END=53556453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 53556454 . G . PASS END=53556459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 53556460 . G . PASS END=53556460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 53556461 . A . PASS END=53556467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 53556468 . G . PASS END=53556468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 53556469 . T . PASS END=53556469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 53556470 . G . PASS END=53556470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 53556471 . T . PASS END=53556472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 53556473 . G . PASS END=53556478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,855:0,56,255:19,0 chr1 53556479 . C . PASS END=53556480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53556481 . A . PASS END=53556483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,770:0,52,255:20,0 chr1 53556484 . G . PASS END=53556488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 53556489 . A . PASS END=53556508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,743:0,47,255:19,0 chr1 53556509 . C . PASS END=53556509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 53556510 . A . PASS END=53556567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:15:0,44,574:0,44,255:19,0 chr1 53556568 . A . PASS END=53556568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 53556569 . C . PASS END=53556595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,549:0,51,255:19,0 chr1 53556596 . A . PASS END=53556596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:17,0 chr1 53556597 . G . PASS END=53556625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:19,0 chr1 53556626 . G . PASS END=53556637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:15:0,33,495:0,35,255:13,0 chr1 53556638 . G . PASS END=53556638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 53556639 . C . PASS END=53556639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 53556640 . T . LowGQ END=53556640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,333:27,0,255:10,0 chr1 53556641 . C . PASS END=53556645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 53556646 . T . PASS END=53556646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 53556647 . T . PASS END=53556654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 53556655 . C . PASS END=53556655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 53558226 . C . PASS END=53558232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr1 53558233 . A . PASS END=53558236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr1 53558237 . G . PASS END=53558238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 53558239 . C . PASS END=53558240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 53558241 . A . PASS END=53558246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,964:0,84,255:30,0 chr1 53558247 . A . PASS END=53558247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 53558248 . T . PASS END=53558269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:30:0,90,1117:0,90,255:40,0 chr1 53558270 . A G, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=2.739;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,23,0:0.535,0.000:43:13,16,0:7,7,0:48:85,0,50,815,715,1530:255,0,255:20,0:5.0000e+01,6.7304e-05,5.2577e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,19,4:10,10,16,7 chr1 53558271 . C . PASS END=53558307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,120,1800:0,125,255:40,0 chr1 53558308 . A . PASS END=53558459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:38:0,81,1260:0,81,255:40,0 chr1 53559133 . C . PASS END=53559216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,87,255:37,0 chr1 53559217 . C . PASS END=53559232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 53569018 . C . PASS END=53569042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:22:0,61,785:0,61,255:26,0 chr1 53569043 . G . PASS END=53569101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1000:0,81,255:33,0 chr1 53569102 . G . PASS END=53569102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:32,0 chr1 53569103 . C . PASS END=53569180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1241:0,86,255:40,0 chr1 53569181 . A . PASS END=53569181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 53569182 . G . PASS END=53569240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:32:0,90,1218:0,90,255:40,0 chr1 53569287 . T . PASS END=53569289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 53571404 . C . PASS END=53571446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:34:0,86,1202:0,86,255:38,0 chr1 53574261 . T . PASS END=53574306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,118,1584:0,118,255:40,0 chr1 53580430 . C . PASS END=53580430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 53580431 . G . PASS END=53580431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 53580432 . G . PASS END=53580438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:18:0,47,660:0,47,255:20,0 chr1 53580439 . T . PASS END=53580442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 53580443 . A . PASS END=53580443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,642:0,35,255:21,0 chr1 53580444 . C . PASS END=53580457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:23,0 chr1 53580458 . A . PASS END=53580458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 53580459 . G . PASS END=53580482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 53580483 . C . PASS END=53580483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 53580484 . T . PASS END=53580503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 53580504 . C . PASS END=53580504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 53580505 . G . PASS END=53580507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 53580508 . C . PASS END=53580508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 53580509 . T . PASS END=53580510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,945:0,62,255:24,0 chr1 53580511 . C . PASS END=53580513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53580514 . G . PASS END=53580523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr1 53580524 . T . PASS END=53580525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53580526 . G . PASS END=53580529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 53580530 . C . PASS END=53580543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 53580544 . A . PASS END=53580544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,909:0,50,255:26,0 chr1 53580545 . C . PASS END=53580545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 53580546 . G . PASS END=53580546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 53580547 . A . PASS END=53580547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 53580548 . T . PASS END=53580550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 53580551 . C . PASS END=53580570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,878:0,64,255:26,0 chr1 53580571 . A . PASS END=53580571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 53580572 . G . PASS END=53580573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 53580574 . T . PASS END=53580574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:25,0 chr1 53580575 . A . PASS END=53580596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,61,255:24,0 chr1 53580597 . C . PASS END=53580605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,692:0,46,255:18,0 chr1 53580606 . A . PASS END=53580606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,613:0,30,255:16,0 chr1 53580607 . G . PASS END=53580607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 53580608 . A . PASS END=53580608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,641:0,30,255:16,0 chr1 53580609 . G . PASS END=53580610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:17,0 chr1 53580611 . T . PASS END=53580611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,501:0,37,255:16,0 chr1 53580612 . C . PASS END=53580616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 53580617 . C . PASS END=53580617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 53580618 . A . PASS END=53580623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 53580624 . G . PASS END=53580624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 53580625 . G . PASS END=53580625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:15,0 chr1 53580626 . A . PASS END=53580627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 53580628 . G . PASS END=53580628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:13,0 chr1 53580629 . C . PASS END=53580634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 53580635 . C . PASS END=53580641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,557:0,32,255:14,0 chr1 53580642 . C . PASS END=53580645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 53600022 . C . PASS END=53600029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:30,0 chr1 53600030 . C . PASS END=53600030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 53600031 . A . PASS END=53600042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1103:0,80,255:30,0 chr1 53600043 . A . PASS END=53600043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1026:0,57,255:30,0 chr1 53600044 . T . PASS END=53600063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 53600064 . A . PASS END=53600064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 53600065 . T . PASS END=53600065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 53600066 . C . PASS END=53600067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1108:0,65,255:30,0 chr1 53600068 . G . PASS END=53600072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 53600073 . T . PASS END=53600073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,940:0,73,255:25,0 chr1 53600074 . C . PASS END=53600076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 53600077 . C . PASS END=53600101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,929:0,62,255:26,0 chr1 53607987 . C . PASS END=53607996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1286:0,92,255:36,0 chr1 53607997 . A . PASS END=53607997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,935:0,60,255:34,0 chr1 53607998 . G . PASS END=53608038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1229:0,95,255:38,0 chr1 53608039 . A . PASS END=53608039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:37,0 chr1 53608040 . T . PASS END=53608067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:38:0,97,1335:0,97,255:39,0 chr1 53608068 . T . PASS END=53608068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr1 53608069 . C . PASS END=53608094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:35,0 chr1 53608095 . C . PASS END=53608106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:26:0,69,1035:0,71,255:26,0 chr1 53608107 . G . PASS END=53608109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 53608110 . A . PASS END=53608116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 53608117 . A . PASS END=53608121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 53662155 . T . PASS END=53662155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 53662331 . C . PASS END=53662331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 53662334 . C . PASS END=53662334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 53662374 . G . PASS END=53662374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 53662387 . G . PASS END=53662387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 53662400 . A . PASS END=53662400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 53662499 . G . PASS END=53662499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 53662515 . C . PASS END=53662515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 53662616 . A . PASS END=53662621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:18,0 chr1 53662622 . C . PASS END=53662622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 53662623 . C . PASS END=53662644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 53662645 . G . PASS END=53662654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:24,0 chr1 53662655 . C . PASS END=53662655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 53662656 . C . PASS END=53662664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,811:0,69,255:24,0 chr1 53662665 . G . PASS END=53662669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53662670 . G . PASS END=53662670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 53662671 . G . PASS END=53662671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53662672 . A . PASS END=53662686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,961:0,75,255:26,0 chr1 53662687 . C . PASS END=53662699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 53662700 . T . PASS END=53662716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 53662717 . C . PASS END=53662729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 53662730 . A . PASS END=53662730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 53662731 . T . PASS END=53662731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 53662732 . C . PASS END=53662732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 53662733 . G . PASS END=53662756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,67,255:26,0 chr1 53662757 . A . PASS END=53662757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 53662758 . G . PASS END=53662765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:22,0 chr1 53662766 . A . PASS END=53662766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 53662767 . G . PASS END=53662767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 53662770 . G . PASS END=53662770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 53662975 . A . PASS END=53663026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:31:0,86,1125:0,86,255:36,0 chr1 53663027 . T . PASS END=53663029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 53663030 . C . PASS END=53663041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:28,0 chr1 53666391 . G . PASS END=53666471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,134,255:40,0 chr1 53667994 . G . PASS END=53668101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:56:0,117,1755:0,138,255:40,0 chr1 53668111 . C . PASS END=53668111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,105,1575:0,138,255:35,0 chr1 53675685 . A . PASS END=53675685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 53675687 . G . PASS END=53675692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:18,0 chr1 53675693 . G . PASS END=53675694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 53675695 . T . PASS END=53675695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 53675696 . T . PASS END=53675700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 53675701 . A . PASS END=53675701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr1 53675702 . T . PASS END=53675702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 53675703 . G . PASS END=53675706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:29,0 chr1 53675707 . C . PASS END=53675708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 53675709 . A . PASS END=53675719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,995:0,83,255:33,0 chr1 53675720 . A . PASS END=53675720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1058:0,69,255:31,0 chr1 53675721 . C . PASS END=53676082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1302:0,81,255:40,2 chr1 53676083 . T . PASS END=53676083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1451:0,57,255:36,2 chr1 53676084 . A . PASS END=53676105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1329:0,84,255:38,0 chr1 53676106 . T . PASS END=53676106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1090:0,77,255:33,0 chr1 53676107 . T . PASS END=53676130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1238:0,94,255:34,0 chr1 53676131 . A . PASS END=53676131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 53676132 . C . PASS END=53676172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1202:0,83,255:31,0 chr1 53676173 . T . PASS END=53676174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 53676175 . C . PASS END=53676195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1153:0,80,255:30,0 chr1 53676196 . C . PASS END=53676197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 53676198 . C . PASS END=53676200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 53676201 . G . PASS END=53676201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 53676202 . T . PASS END=53676202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 53676203 . T . PASS END=53676213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 53676214 . T . PASS END=53676217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 53676218 . T . PASS END=53676220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 53676221 . C . PASS END=53676222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 53676223 . A . PASS END=53676223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:25,0 chr1 53676224 . G . PASS END=53676235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 53676236 . A . PASS END=53676236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:26,0 chr1 53676237 . C . PASS END=53676269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1072:0,80,255:31,0 chr1 53676270 . T . PASS END=53676271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr1 53676272 . G . PASS END=53676273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 53676274 . G . PASS END=53676282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 53676283 . G . PASS END=53676283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 53676284 . A . PASS END=53676284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 53676285 . G . PASS END=53676286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 53676287 . G . PASS END=53676288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 53676289 . C . PASS END=53676292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53676293 . G . PASS END=53676295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 53676296 . A . PASS END=53676298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 53676299 . T . PASS END=53676299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 53676300 . G . PASS END=53676303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 53676304 . T . PASS END=53676305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,954:0,70,255:27,0 chr1 53676306 . G . PASS END=53676309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1192:0,83,255:31,0 chr1 53676310 . G . PASS END=53676311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 53676312 . G . PASS END=53676313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 53676314 . T . PASS END=53676331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:65:27:0,65,959:0,65,255:26,0 chr1 53676332 . A . PASS END=53676332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 53676333 . C . PASS END=53676346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,71,255:26,0 chr1 53676347 . A . PASS END=53676348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,894:0,42,255:26,0 chr1 53676349 . C . PASS END=53676405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,886:0,62,255:25,0 chr1 53676406 . A . PASS END=53676406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr1 53676407 . A . PASS END=53676410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 53676411 . C . PASS END=53676415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 53676416 . A . PASS END=53676416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 53676417 . C . PASS END=53676433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,856:0,66,255:24,0 chr1 53676434 . A . PASS END=53676434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 53676435 . T . PASS END=53676435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 53676436 . G . PASS END=53676436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:21,0 chr1 53676437 . G . PASS END=53676439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 53676440 . C . PASS END=53676440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 53676441 . T . PASS END=53676447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 53676448 . G A, 124.79 PASS DP=27;MQ=250.00;FractionInformativeReads=0.963 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,15,0:0,11,0:75:163,78,0,971,78,971:255,78,0:0,0:1.2479e+02,7.4791e+01,2.5886e-07,4.5000e+02,1.0956e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,14:0,0,15,11 chr1 53676449 . T . PASS END=53676455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1008:0,68,255:26,0 chr1 53676456 . T . PASS END=53676457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53676458 . A . PASS END=53676458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 53676459 . G . PASS END=53676459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 53676460 . C . PASS END=53676461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 53676462 . C . PASS END=53676485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1191:0,88,255:40,0 chr1 53676486 . G . PASS END=53676674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1175:0,89,255:40,0 chr1 53676675 . T . PASS END=53676675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:29,0 chr1 53676676 . G . PASS END=53676680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1036:0,93,255:31,0 chr1 53676681 . C . PASS END=53676681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 53676682 . G . PASS END=53676684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 53676685 . C . PASS END=53676690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:26,0 chr1 53676691 . C . PASS END=53676691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:25,0 chr1 53676692 . A . PASS END=53676693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 53676694 . A . PASS END=53676694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 53676695 . G . PASS END=53676704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 53676705 . A . PASS END=53676705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,911:0,57,255:24,0 chr1 53676706 . G . PASS END=53676726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 53676727 . C . PASS END=53676727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53676728 . T . PASS END=53676728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 53676729 . G . PASS END=53676730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 53676731 . G . PASS END=53676732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 53676733 . C . PASS END=53676733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 53676734 . C . PASS END=53676741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 53676742 . G . PASS END=53676755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:27:0,68,1006:0,68,255:26,0 chr1 53676756 . A . PASS END=53676760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 53676761 . A . PASS END=53676775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,74,255:27,0 chr1 53676776 . G . PASS END=53676782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 53676783 . C . PASS END=53676788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 53676789 . G . PASS END=53676789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 53676790 . A . PASS END=53676790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr1 53676791 . C . PASS END=53676791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 53676792 . A . PASS END=53676792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 53676793 . G . PASS END=53676793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 53676794 . T . PASS END=53676794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 53676795 . G . PASS END=53676795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 53676796 . G . PASS END=53676796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:27,0 chr1 53676797 . C . PASS END=53676807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 53676808 . T . PASS END=53676809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1102:0,77,255:26,0 chr1 53676810 . C . PASS END=53677039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1161:0,80,255:40,0 chr1 53677040 . G . PASS END=53677040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:30,0 chr1 53677041 . G . PASS END=53677041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 53678453 . G . PASS END=53678488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,120,1800:0,120,255:40,0 chr1 53678936 . G . PASS END=53678942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 53678943 . C . PASS END=53678951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 53678952 . A . PASS END=53678953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 53678954 . A . PASS END=53678954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr1 53678955 . C . PASS END=53678956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr1 53678957 . T . PASS END=53678960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 53678961 . T . PASS END=53678961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,939:0,53,255:26,0 chr1 53678962 . G . PASS END=53678972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:29,0 chr1 53678973 . T . PASS END=53678973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:28,0 chr1 53678974 . C . PASS END=53678978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 53678979 . A . PASS END=53678979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 53678980 . G . PASS END=53678986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:29,0 chr1 53678987 . A . PASS END=53678994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 53678995 . A . PASS END=53679003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 53679004 . G . PASS END=53679004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 53679005 . A . PASS END=53679005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 53679006 . G . PASS END=53679006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 53679007 . C . PASS END=53679036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1041:0,80,255:32,0 chr1 53679037 . A . PASS END=53679055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,933:0,67,255:26,0 chr1 53679056 . C . PASS END=53679065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:30,0 chr1 53679066 . G . PASS END=53679078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,80,255:26,0 chr1 53679079 . G . PASS END=53679079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 53679080 . T . PASS END=53679091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 53679092 . G . PASS END=53679095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 53679096 . T . PASS END=53679098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1024:0,71,255:27,0 chr1 53679099 . C . PASS END=53679110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 53679111 . T . PASS END=53679111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 53679112 . G . PASS END=53679118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:29,0 chr1 53679119 . T . PASS END=53679120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 53679121 . G . PASS END=53679134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 53679135 . T . PASS END=53679136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 53679137 . T . PASS END=53679153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 53679154 . G . PASS END=53679154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 53679155 . G . PASS END=53679162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1116:0,84,255:29,0 chr1 53679163 . G . PASS END=53679163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 53679164 . T . PASS END=53679181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1119:0,80,255:31,0 chr1 53679182 . G . PASS END=53679182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1063:0,49,255:30,0 chr1 53679183 . C . PASS END=53679191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1202:0,96,255:32,0 chr1 53679192 . G . PASS END=53679202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 53679203 . A . PASS END=53679228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,936:0,73,255:26,0 chr1 53679229 . A G, 44.57 PASS DP=26;MQ=249.77;MQRankSum=3.180;ReadPosRankSum=0.862;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,9,0:0.346,0.000:26:8,6,0:9,3,0:44:79,0,50,322,608,930:255,0,255:15,0:4.4567e+01,1.7344e-04,5.3000e+01,3.2192e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,3,6:9,8,4,5 chr1 53679230 . T . PASS END=53679250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 53679251 . A . PASS END=53679251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 53679252 . A . PASS END=53679255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 53679256 . A . PASS END=53679256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 53679257 . T . PASS END=53679258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 53679259 . A . PASS END=53679259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 53679260 . A . PASS END=53679266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 53679267 . A . PASS END=53679267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 53679628 . T . PASS END=53679628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 53679706 . T . PASS END=53679706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 53679866 . T . PASS END=53679866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 53680331 . T . PASS END=53680408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:39:0,94,1440:0,94,255:40,0 chr1 53681663 . C . PASS END=53681698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,138,255:40,0 chr1 53681699 . T G, 46.83 PASS DP=62;MQ=250.00;MQRankSum=6.630;ReadPosRankSum=3.200;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,25,0:0.403,0.000:62:18,11,0:19,14,0:46:82,0,50,865,1255,2121:255,0,255:32,0:4.6833e+01,1.1183e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,19,15,10:21,16,15,10 chr1 53681700 . G . PASS END=53681728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,129,255:40,0 chr1 53682454 . C . PASS END=53682465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1257:0,89,255:35,0 chr1 53682466 . A . PASS END=53682466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:35,0 chr1 53682467 . T . PASS END=53682520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:34:0,82,1181:0,82,255:40,0 chr1 53682521 . T . PASS END=53682531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 53683844 . A . PASS END=53683875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,138,255:40,0 chr1 53684086 . C . PASS END=53684163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:51:0,96,1440:0,124,255:40,0 chr1 53684164 . T . PASS END=53684164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1319:0,65,255:31,0 chr1 53684165 . G . PASS END=53684167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 53684539 . C . PASS END=53684545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1363:0,95,255:38,0 chr1 53684546 . C . PASS END=53684546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:37,0 chr1 53684547 . G . PASS END=53684562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:40:0,90,1374:0,90,255:40,0 chr1 53684563 . G . PASS END=53684595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1330:0,103,255:39,0 chr1 53685933 . C . PASS END=53685935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 53685936 . C . PASS END=53685936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 53685937 . A . PASS END=53685943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 53685944 . A . PASS END=53685945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:20:12:0,20,410:0,20,255:12,0 chr1 53685946 . C . PASS END=53685951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 53685952 . T . PASS END=53685954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 53685955 . T . PASS END=53685955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53685956 . C . PASS END=53685960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53685961 . A . PASS END=53685962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:14,0 chr1 53685963 . G . PASS END=53685974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,675:0,44,255:18,0 chr1 53685975 . G . PASS END=53685975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 53685976 . G . PASS END=53685976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 53685977 . T . PASS END=53685982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 53685983 . T . PASS END=53685983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,783:0,55,255:21,0 chr1 53685984 . C . PASS END=53685985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 53685986 . C . PASS END=53685986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 53685987 . C . PASS END=53685987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 53685988 . A . PASS END=53685989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 53685990 . C . PASS END=53686005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,701:0,66,255:22,0 chr1 53686006 . A . PASS END=53686006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 53686007 . G . PASS END=53686012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,760:0,66,255:22,0 chr1 53686013 . T . PASS END=53686013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 53686014 . T . PASS END=53686015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 53686016 . T . PASS END=53686016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 53686242 . C . PASS END=53686247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1290:0,94,255:35,0 chr1 53692717 . C . PASS END=53692746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:91:68:0,91,1800:0,91,255:40,0 chr1 53692747 . A . PASS END=53692816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,4:91:99:78:0,120,1800:0,143,255:40,0 chr1 53694544 . T . PASS END=53694626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,160,255:40,0 chr1 53699214 . C . PASS END=53699314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:32:0,86,1202:0,86,255:40,0 chr1 53699315 . G . PASS END=53699315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 53699316 . T . PASS END=53699319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:27,0 chr1 53699320 . T . PASS END=53699324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 53701249 . C . PASS END=53701307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,115,1800:0,115,255:40,0 chr1 53704033 . C . PASS END=53704120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:39:0,90,1485:0,90,255:40,0 chr1 53711549 . C . PASS END=53711591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,518:0,41,255:19,0 chr1 53711592 . C . PASS END=53711592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 53711593 . T . PASS END=53711593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 53711594 . G . PASS END=53711595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 53711596 . A . PASS END=53711624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr1 53711625 . G . PASS END=53711626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 53711627 . A . PASS END=53711627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 53711628 . A . PASS END=53711628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 53711629 . A . PASS END=53711629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr1 53711630 . C . PASS END=53711638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,540:0,32,255:13,0 chr1 53711639 . T . PASS END=53711640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 53711641 . C . PASS END=53711641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 53711642 . A . PASS END=53711642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 53711643 . A . PASS END=53711643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 53711644 . C . PASS END=53711644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 53711645 . C . PASS END=53711645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 53711646 . C . PASS END=53711646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53711647 . A . PASS END=53711647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:12,0 chr1 53711648 . A . PASS END=53711653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 53712690 . T . PASS END=53712726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,106,1710:0,106,255:40,0 chr1 53712727 . C T, 50.00 PASS DP=44;MQ=249.65;MQRankSum=5.600;ReadPosRankSum=3.049;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,22,0:0.512,0.000:43:7,10,0:14,12,0:48:85,0,50,750,743,1493:255,0,255:17,0:5.0000e+01,6.5233e-05,5.2973e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,11,11:9,12,11,11 chr1 53712728 . G . PASS END=53712728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr1 53714231 . T . PASS END=53714263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:37:0,93,1345:0,93,255:40,0 chr1 53715052 . C . PASS END=53715094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:41:0,84,1354:0,84,255:40,0 chr1 53715095 . A . PASS END=53715095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1645:0,75,255:40,0 chr1 53715096 . G . PASS END=53715189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:31:0,84,1260:0,93,255:40,0 chr1 53715190 . G . PASS END=53715228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,815:0,66,255:26,0 chr1 53716362 . T . PASS END=53716365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:17,0 chr1 53716366 . G . PASS END=53716369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 53716370 . A . PASS END=53716378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1078:0,84,255:33,0 chr1 53716379 . C . PASS END=53716400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1104:0,86,255:40,0 chr1 53716401 . A . PASS END=53716401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1054:0,59,255:38,0 chr1 53716402 . T . PASS END=53716406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1425:0,93,255:40,0 chr1 53716407 . C . LowGQ END=53716407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,8:44:0:44:0,0,928:16,0,255:36,0 chr1 53716408 . T . PASS END=53716408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 53716409 . C . PASS END=53716409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:17:44:0,17,980:0,17,255:38,0 chr1 53716410 . A . PASS END=53716411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,115,1402:0,115,255:40,0 chr1 53716412 . C . PASS END=53716412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1309:0,66,255:39,0 chr1 53716413 . T . PASS END=53716415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 53716416 . G A, 181.98 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,18,0:0,27,0:132:220,135,0,1683,135,1683:255,135,0:0,0:1.8198e+02,1.3198e+02,0.0000e+00,4.5000e+02,1.6675e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,18:0,0,26,19 chr1 53716417 . T . PASS END=53716453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,105,1520:0,105,255:40,0 chr1 53716454 . C . PASS END=53716534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1215:0,89,255:40,0 chr1 53720625 . C . PASS END=53720629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 53720789 . C . PASS END=53720857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,101,1457:0,101,255:40,0 chr1 53722912 . A . PASS END=53722912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 53722913 . G . PASS END=53722913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 53722914 . T . PASS END=53722914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 53722915 . G . PASS END=53722915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 53722916 . C . PASS END=53722917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,970:0,57,255:28,0 chr1 53722918 . G . PASS END=53722920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 53722921 . A . PASS END=53722921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 53722922 . G . PASS END=53722922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 53722923 . T . PASS END=53722923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 53722924 . G . PASS END=53722982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:30:0,90,1111:0,90,255:40,0 chr1 53722983 . A . PASS END=53722983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1389:0,72,255:40,0 chr1 53722984 . C . PASS END=53723066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,117,1755:0,123,255:40,0 chr1 53723067 . G . PASS END=53723067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1706:0,75,255:40,0 chr1 53723068 . C . PASS END=53723117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:30:0,81,1194:0,83,255:40,0 chr1 53723118 . G . PASS END=53723136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,937:0,62,255:26,0 chr1 53723706 . T . PASS END=53723746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:92:0,120,1800:0,239,255:40,0 chr1 53723991 . C . PASS END=53724002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,108,1465:0,114,255:39,0 chr1 53724003 . T . PASS END=53724143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:32:0,81,1215:0,82,255:40,0 chr1 53726136 . C . PASS END=53726277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,105,1575:0,114,255:40,0 chr1 53727445 . T . PASS END=53727448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:35,0 chr1 53727449 . A . PASS END=53727449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1121:0,60,255:31,0 chr1 53727450 . G . PASS END=53727450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 53727451 . T . PASS END=53727451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1257:0,64,255:31,0 chr1 53727452 . G . PASS END=53727459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1451:0,104,255:39,0 chr1 53727740 . C . PASS END=53727879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:35:0,93,1395:0,93,255:40,0 chr1 53728118 . C . PASS END=53728224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1260:0,84,255:40,0 chr1 53728225 . C . PASS END=53728225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:27,0 chr1 53728226 . A . PASS END=53728229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 53728230 . C . PASS END=53728230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 53728231 . A . PASS END=53728231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:28,0 chr1 53728232 . T . PASS END=53728234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 53728235 . A . PASS END=53728235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 53728236 . C . PASS END=53728236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 53729841 . C . PASS END=53729846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr1 53729847 . A . PASS END=53729847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 53729848 . G . PASS END=53729850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:19,0 chr1 53729851 . G . PASS END=53729887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,738:0,60,255:26,0 chr1 53729888 . G . PASS END=53729888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 53729889 . C . PASS END=53729900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 53729901 . C . PASS END=53729907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 53729908 . G . PASS END=53729969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,908:0,65,255:25,0 chr1 53729970 . T . PASS END=53729970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 53729971 . T . PASS END=53730052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 53730053 . C . PASS END=53730054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 53730055 . T . PASS END=53730057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53730058 . C . PASS END=53730058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 53730059 . C . PASS END=53730068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 53732145 . C . PASS END=53732155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,854:0,61,255:27,0 chr1 53732156 . A . PASS END=53732158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1188:0,87,255:32,0 chr1 53732159 . G . PASS END=53732159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:31,0 chr1 53732160 . T . PASS END=53732165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:33,0 chr1 53732166 . A . PASS END=53732166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1117:0,68,255:31,0 chr1 53732167 . G . PASS END=53732256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1172:0,83,255:38,0 chr1 53732257 . T . PASS END=53732257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:33,0 chr1 53732258 . C . PASS END=53732268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:36,0 chr1 53732269 . T . PASS END=53732269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1340:0,59,255:31,0 chr1 53732270 . C . PASS END=53732277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1363:0,95,255:33,0 chr1 53732278 . C . PASS END=53732287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:32,0 chr1 53732288 . G . PASS END=53732300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,60,255:26,0 chr1 53732301 . A . PASS END=53732314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 53732315 . G T, 103.72 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:141,57,0,699,57,699:255,57,0:0,0:1.0372e+02,5.3721e+01,1.8379e-05,4.5000e+02,8.8491e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,14:0,0,12,7 chr1 53732316 . C . PASS END=53732319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 53736700 . C . PASS END=53736825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:31:0,83,1135:0,83,255:40,0 chr1 53736899 . C . PASS END=53736938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1349:0,90,255:39,0 chr1 53736939 . G . PASS END=53736939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr1 53736940 . C . PASS END=53737013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1311:0,81,255:40,0 chr1 53737014 . C . PASS END=53737014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:30,0 chr1 53737015 . A . PASS END=53737021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1266:0,94,255:32,0 chr1 53737022 . G . PASS END=53737022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:29,0 chr1 53737023 . G . PASS END=53737045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1132:0,83,255:32,0 chr1 53737046 . T . PASS END=53737046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,966:0,62,255:25,0 chr1 53737047 . C . PASS END=53737051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 53737052 . A . PASS END=53737057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 53737058 . G . PASS END=53737060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 53737061 . G . PASS END=53737061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 53737062 . G . PASS END=53737064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 53737065 . T . PASS END=53737065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 53737066 . G . PASS END=53737087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 53738276 . C . PASS END=53738310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1396:0,98,255:40,0 chr1 53738311 . G . PASS END=53738311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:36,0 chr1 53738312 . G . PASS END=53738314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1396:0,111,255:37,0 chr1 53741303 . C . PASS END=53741425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:56:0,120,1800:0,136,255:40,0 chr1 53742364 . G . PASS END=53742364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 53742365 . G . PASS END=53742365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 53742366 . C . PASS END=53742404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,252:0,27,252:9,0 chr1 53742405 . C . PASS END=53742416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 53742417 . C . PASS END=53742428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,302:0,24,255:8,0 chr1 53742429 . A . PASS END=53742429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 53742430 . C . PASS END=53742430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 53742431 . G . PASS END=53742431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 53742432 . C . PASS END=53742464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 53742465 . G . PASS END=53742468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 53742469 . C . PASS END=53742476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 53742477 . G . PASS END=53742491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:4:0,9,135:0,12,133:3,0 chr1 53742492 . G . PASS END=53742492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 53742493 . C . LowGQ END=53742493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 53742494 . C . PASS END=53742505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:4,0 chr1 53742506 . A G, 30.76 PASS DP=4;MQ=250.00;MQRankSum=1.026;ReadPosRankSum=1.026;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,2,0:0.500,0.000:4:2,0,0:0,2,0:31:66,0,50,72,72,143:66,0,66:2,0:3.0761e+01,3.6683e-03,5.3004e+01,7.1551e+01,1.0630e+02,1.4608e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,1,1,1:1,1,1,1 chr1 53742507 . C . PASS END=53742543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 53742544 . C . PASS END=53742553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,180:5,0 chr1 53742554 . C . PASS END=53742554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 53742555 . T . PASS END=53742555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 53742556 . G . PASS END=53742556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 53742557 . G . PASS END=53742609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr1 53742610 . A . LowGQ END=53742610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 53742611 . G . PASS END=53742641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 53742642 . G . PASS END=53742658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 53742659 . G . PASS END=53742659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 53742660 . C . PASS END=53742686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 53742687 . T . PASS END=53742687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 53742688 . C . PASS END=53742740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,255:9,0 chr1 53742741 . G . PASS END=53742750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:7:0,18,270:0,21,249:6,0 chr1 53746259 . A . PASS END=53746266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:25,0 chr1 53746267 . C . PASS END=53746267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 53746268 . A . PASS END=53746268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 53746269 . G . PASS END=53746275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1055:0,84,255:31,0 chr1 53746276 . T . PASS END=53746276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 53746277 . C . PASS END=53746287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:33,0 chr1 53746288 . C . PASS END=53746288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:34,0 chr1 53746289 . C . PASS END=53746382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,92,255:40,0 chr1 53746383 . C . PASS END=53746383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr1 53746384 . T . PASS END=53746387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 53755239 . T . PASS END=53755258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,745:0,60,255:26,0 chr1 53755259 . T . PASS END=53755259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr1 53755260 . C . PASS END=53755262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 53755263 . A . PASS END=53755267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 53755268 . T . PASS END=53755269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 53755270 . A . PASS END=53755302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1141:0,90,255:33,0 chr1 53755303 . T . PASS END=53755303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,987:0,66,255:29,0 chr1 53755304 . T . PASS END=53755336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:29,0 chr1 53755337 . T . PASS END=53755337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 53755338 . C . PASS END=53755342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 53755343 . T . PASS END=53755343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:26,0 chr1 53755344 . C . PASS END=53755348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 53755349 . C . PASS END=53755361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 53779399 . T . PASS END=53779415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,629:0,43,255:19,0 chr1 53792545 . G . PASS END=53792553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 53792554 . C . PASS END=53792554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 53792555 . C . PASS END=53792561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 53792562 . C . PASS END=53792562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:21,0 chr1 53792563 . T . PASS END=53792563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 53792564 . G . PASS END=53792565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 53792566 . G . PASS END=53792566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 53792567 . G . PASS END=53792578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:25,0 chr1 53792579 . A . PASS END=53792579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:24,0 chr1 53792580 . T . PASS END=53792584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 53792585 . C . PASS END=53792590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1072:0,84,255:29,0 chr1 53792591 . G . PASS END=53792591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 53792592 . C . PASS END=53792594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 53792595 . C . PASS END=53792596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 53792597 . C . PASS END=53792601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:28,0 chr1 53792602 . C . PASS END=53792613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:73:27:0,73,996:0,73,255:26,0 chr1 53792614 . A . PASS END=53792614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr1 53792615 . G . PASS END=53792658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,870:0,61,255:26,0 chr1 53792659 . C . PASS END=53792659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:19,0 chr1 53792660 . C . PASS END=53792664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 53793461 . C . LowDepth;LowGQ END=53793571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:1,0 chr1 53793572 . C . LowDepth;LowGQ END=53793584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 53925127 . A . PASS END=53925127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 53925128 . T . PASS END=53925128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 53925129 . G . PASS END=53925172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr1 53925173 . A . PASS END=53925173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 53925174 . C . PASS END=53925187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 53925188 . T . PASS END=53925188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 53925189 . G . PASS END=53925195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 53925196 . A . PASS END=53925196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 53925197 . A . PASS END=53925203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 53925204 . C . PASS END=53925204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 53925205 . G . PASS END=53925207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 53925208 . G . PASS END=53925243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:17,0 chr1 53925244 . T . PASS END=53925244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 53925245 . G . PASS END=53925247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 53925248 . A . PASS END=53925248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 53925249 . C . PASS END=53925250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 53925251 . T . PASS END=53925253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,38,255:13,0 chr1 53925254 . T . PASS END=53925254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:12,0 chr1 53925255 . C . PASS END=53925262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 53925263 . G . PASS END=53925263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 53925264 . C . PASS END=53925274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,605:0,51,255:17,0 chr1 53925275 . T . PASS END=53925275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 53925276 . G . PASS END=53925283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 53925284 . A . PASS END=53925284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:12,0 chr1 53925285 . G . PASS END=53925287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 53925288 . G . PASS END=53925288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:13,0 chr1 53925289 . G . PASS END=53925321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,558:0,48,255:16,0 chr1 53925322 . G . PASS END=53925322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 53925323 . A . PASS END=53925324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 53925325 . G . PASS END=53925326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 53925327 . G . PASS END=53925331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr1 53925332 . T . PASS END=53925337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:16:0,35,540:0,35,255:13,0 chr1 53925338 . C . PASS END=53925338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:13,0 chr1 53925339 . G . PASS END=53925339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 53925340 . C . PASS END=53925340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr1 53925341 . A . LowGQ END=53925341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,518:4,0,255:12,0 chr1 53925342 . G . PASS END=53925342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:12,0 chr1 53925343 . G . PASS END=53925343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr1 53925344 . G . PASS END=53925345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53925346 . C . LowGQ END=53925353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:14:0,0,425:0,0,255:13,0 chr1 53925354 . G . PASS END=53925354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53925355 . G . PASS END=53925358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:12,0 chr1 53925359 . C . PASS END=53925359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53925360 . C . PASS END=53925362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:12,0 chr1 53925363 . G . PASS END=53925363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53925364 . G . PASS END=53925364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr1 53925365 . C . PASS END=53925365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53925366 . T . PASS END=53925366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 53925367 . G . PASS END=53925369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 53925370 . G . PASS END=53925387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 53925388 . G . PASS END=53925389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,427:0,25,255:14,0 chr1 53925390 . C . PASS END=53925393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53925394 . G . LowGQ END=53925394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,392:5,0,255:11,0 chr1 53925395 . T . PASS END=53925395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 53925396 . C . PASS END=53925398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53925399 . G . PASS END=53925399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 53925400 . G . PASS END=53925404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53925405 . G . PASS END=53925405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 53925406 . A . PASS END=53925406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 53925407 . G . PASS END=53925409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53925410 . T . PASS END=53925410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 53925411 . C . PASS END=53925417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 53925418 . C . PASS END=53925424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 53925425 . C . PASS END=53925428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 53925429 . G . PASS END=53925429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 53925430 . A . PASS END=53925446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 53925447 . C . PASS END=53925449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 53925450 . C . PASS END=53925451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 53925452 . C . PASS END=53925475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,32,255:13,0 chr1 53925476 . C . LowGQ END=53925477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:12,1 chr1 53925478 . T . PASS END=53925497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,427:0,39,255:13,0 chr1 53925498 . G . PASS END=53925498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 53925499 . C . PASS END=53925508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 53925509 . A . PASS END=53925513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:15,0 chr1 53925514 . G . PASS END=53925514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 53925515 . G . PASS END=53925518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 53925519 . G . PASS END=53925519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 53925520 . A . PASS END=53925530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,673:0,41,255:17,0 chr1 53925531 . G . PASS END=53925531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 53925532 . C . PASS END=53925551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,592:0,51,255:17,0 chr1 53925552 . C . PASS END=53925552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 53925553 . C . PASS END=53925555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 53925556 . G . PASS END=53925556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 53925557 . T . PASS END=53925560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 53925561 . G . PASS END=53925561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 53925562 . C . PASS END=53925590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:16,0 chr1 53925591 . C . PASS END=53925600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 53925601 . G . PASS END=53925619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:16,0 chr1 53925620 . A . LowGQ END=53925620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,435:29,0,255:14,0 chr1 53925621 . G . PASS END=53925643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr1 53925644 . G . PASS END=53925649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 53925650 . T . PASS END=53925652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr1 53925653 . A . PASS END=53925671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:7:0,15,225:0,21,249:6,0 chr1 53925672 . G . PASS END=53925672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 53925673 . A . PASS END=53925698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 53925699 . C . LowGQ END=53925703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,70:0,0,74:3,0 chr1 53927146 . T . PASS END=53927150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 53927151 . C . PASS END=53927151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 53927152 . C . PASS END=53927158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 53927159 . C . PASS END=53927248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1133:0,80,255:40,0 chr1 53927249 . C . PASS END=53927249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:28,0 chr1 53927250 . C . PASS END=53927250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 53927251 . C . PASS END=53927251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 53927252 . T . PASS END=53927257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 53927258 . C . PASS END=53927258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 53927259 . G . PASS END=53927263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 53927264 . C . PASS END=53927264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 53927265 . C . PASS END=53927267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 53927268 . C . PASS END=53927268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 53927269 . A . PASS END=53927292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr1 53927293 . G . PASS END=53927309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,878:0,61,255:26,0 chr1 53927310 . G . PASS END=53927318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:17,0 chr1 53930310 . G . PASS END=53930318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 53930319 . C . PASS END=53930342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53930343 . T . PASS END=53930343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 53930344 . A . PASS END=53930349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 53930350 . T . PASS END=53930350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,1 chr1 53930351 . G . PASS END=53930353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:16:17:0,16,563:0,16,255:16,1 chr1 53930354 . G . PASS END=53930354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:17,0 chr1 53930355 . C . PASS END=53930383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr1 53930384 . A . PASS END=53930384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 53930385 . C . PASS END=53930403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:19,0 chr1 53930404 . A . PASS END=53930404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 53930405 . G . PASS END=53930411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,651:0,51,255:17,0 chr1 53930412 . C . PASS END=53930412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 53930413 . C . PASS END=53930414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 53930415 . C . PASS END=53930420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 53930421 . T . PASS END=53930421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 53930422 . A . PASS END=53930425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 53930426 . C . PASS END=53930431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 53930432 . G . PASS END=53930433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 53930434 . T . PASS END=53930435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 53930436 . C . PASS END=53930438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 53930439 . T . PASS END=53930439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 53930440 . T . PASS END=53930449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 53930450 . G . PASS END=53930455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,402:0,20,255:9,0 chr1 53930456 . G . PASS END=53930456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr1 53930457 . C . PASS END=53930459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 53930460 . C . PASS END=53930467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr1 53930468 . T . PASS END=53930468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr1 53930469 . C . PASS END=53930479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 53930480 . C . PASS END=53930504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,243:9,0 chr1 53930505 . G . PASS END=53930520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:6,0 chr1 53932268 . A . PASS END=53932288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1279:0,89,255:35,0 chr1 53932289 . T . PASS END=53932289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr1 53932290 . G . PASS END=53932329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1161:0,80,255:36,0 chr1 53932330 . G . PASS END=53932330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr1 53932331 . A . PASS END=53932335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr1 53972292 . T . PASS END=53972296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 53972297 . T . PASS END=53972297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 53972298 . G . PASS END=53972302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr1 53972303 . T . LowGQ END=53972303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,421:7,0,255:14,0 chr1 53972304 . G . PASS END=53972314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 53972315 . G . PASS END=53972315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 53972316 . G . PASS END=53972332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,613:0,51,255:19,0 chr1 53972333 . G . PASS END=53972336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 53972337 . A . PASS END=53972337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 53972338 . A . PASS END=53972338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 53972339 . A . PASS END=53972339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 53972340 . G . PASS END=53972340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr1 53972341 . G . PASS END=53972349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:22,0 chr1 53972350 . G . PASS END=53972350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 53972351 . G . PASS END=53972353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 53972354 . A . PASS END=53972354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 53972355 . G . PASS END=53972358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 53972359 . C . PASS END=53972359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 53972360 . C . PASS END=53972387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 53972388 . A . PASS END=53972416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 53972417 . T . PASS END=53972449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,437:0,36,255:13,0 chr1 53974793 . C . PASS END=53974799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 53974800 . A . PASS END=53974800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 53974801 . G . PASS END=53974811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:19,0 chr1 53974812 . G . PASS END=53974813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 53974814 . T . PASS END=53974820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 53974821 . G . PASS END=53974865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:22:0,61,845:0,61,255:26,0 chr1 53974866 . G . PASS END=53974869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 53974870 . A . PASS END=53974870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 53974871 . G . PASS END=53974912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1048:0,80,255:33,0 chr1 53974913 . C . PASS END=53974914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 53974915 . C . PASS END=53974926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:27,0 chr1 53974927 . C . PASS END=53974949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,947:0,75,255:25,0 chr1 53974950 . G . PASS END=53974960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 53975522 . C . PASS END=53975562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 53975563 . G . PASS END=53975580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 53975581 . C . PASS END=53975595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 53975596 . A . PASS END=53975606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr1 53975607 . C . PASS END=53975613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 53975614 . G . PASS END=53975616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 53975617 . T . PASS END=53975617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 53975618 . G . PASS END=53975638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 53975639 . G . PASS END=53975641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 53975642 . G . PASS END=53975646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 53975647 . G . PASS END=53975647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 53975648 . G . PASS END=53975648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 53975649 . C . PASS END=53975661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr1 53975662 . A . PASS END=53975662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 53975663 . G . PASS END=53975700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 53980298 . C . PASS END=53980298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 53980299 . C . PASS END=53980309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 53980310 . C . PASS END=53980310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 53980311 . T . PASS END=53980321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,884:0,72,255:26,0 chr1 53980322 . G . PASS END=53980326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 53980327 . A . PASS END=53980327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:26,0 chr1 53980328 . G . PASS END=53980339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:31,0 chr1 53980340 . T . PASS END=53980340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 53980341 . G . PASS END=53980417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1064:0,84,255:34,0 chr1 53980418 . A . PASS END=53980447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 53980448 . T . PASS END=53980454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 53986307 . C . PASS END=53986322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:19,0 chr1 53986323 . G . PASS END=53986331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:22,0 chr1 53986332 . A . PASS END=53986332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 53986333 . C . PASS END=53986349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:25,0 chr1 53986350 . G . PASS END=53986350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 53986351 . C . PASS END=53986389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,917:0,72,255:26,0 chr1 53986390 . A . PASS END=53986390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:21,0 chr1 53986391 . C . PASS END=53986404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 53986405 . A . PASS END=53986417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:17,0 chr1 53986418 . C . PASS END=53986439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:13,0 chr1 53990450 . C . PASS END=53990526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1260:0,99,255:40,0 chr1 53990527 . T . PASS END=53990546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:25:0,60,900:0,74,255:25,0 chr1 53990547 . C . PASS END=53990554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:19,0 chr1 53990555 . C . PASS END=53990555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:15,0 chr1 53990556 . G . PASS END=53990557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 53990558 . C . PASS END=53990558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:12,0 chr1 53990559 . T . PASS END=53990560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 53995464 . C . PASS END=53995464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 53995465 . G . PASS END=53995466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,860:0,58,255:23,0 chr1 53995467 . G . PASS END=53995476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 53995477 . G . PASS END=53995490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:29,0 chr1 53995491 . G . PASS END=53995492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 53995493 . C . PASS END=53995495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 53995496 . G . PASS END=53995496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 53995497 . G . PASS END=53995504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 53995505 . A . PASS END=53995505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 53995506 . G . PASS END=53995507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 53995508 . T . PASS END=53995508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 53995509 . G . PASS END=53995516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 53995517 . C . PASS END=53995518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 53995519 . T . PASS END=53995519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:24,0 chr1 53995520 . T . PASS END=53995531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,980:0,70,255:25,0 chr1 53995532 . G . PASS END=53995533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 53995534 . T . PASS END=53995564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 53995565 . G . PASS END=53995565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 53995566 . G . PASS END=53995579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 53995580 . T . PASS END=53995580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 53995581 . C . PASS END=53995581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 53995582 . T . PASS END=53995602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 53995603 . A . PASS END=53995618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr1 53995619 . C . PASS END=53995619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 53995620 . T . PASS END=53995625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 54048355 . T . PASS END=54048523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:28:0,84,1003:0,84,255:40,0 chr1 54048524 . G . PASS END=54048524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:27,0 chr1 54048525 . C . PASS END=54048529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1255:0,86,255:30,0 chr1 54048530 . G . PASS END=54048530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:26,0 chr1 54048531 . C . PASS END=54048531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 54048532 . A . PASS END=54048532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 54048533 . C . PASS END=54048534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 54048535 . T . PASS END=54048542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,71,255:26,0 chr1 54048543 . T . PASS END=54048543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:21,0 chr1 54048544 . C . PASS END=54048550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:22,0 chr1 54048551 . T . PASS END=54048551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:18,0 chr1 54048552 . C . PASS END=54048552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 54059781 . C . PASS END=54059815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:19,0 chr1 54059816 . G . PASS END=54059837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:22,0 chr1 54059838 . G . PASS END=54059881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,629:0,40,255:19,0 chr1 54059882 . A . PASS END=54059882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 54059883 . G . PASS END=54059885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 54059886 . G . PASS END=54059887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 54059888 . T . PASS END=54059955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,670:0,54,255:19,0 chr1 54059956 . T . PASS END=54059956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:15,0 chr1 54059957 . C . PASS END=54059978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 54059979 . C . PASS END=54059996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,495:0,31,255:13,0 chr1 54059997 . C . PASS END=54060030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 54060031 . A . LowGQ END=54060031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 54060032 . G . PASS END=54060060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 54060061 . T . PASS END=54060065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 54060066 . C . PASS END=54060099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:9,0 chr1 54060100 . G . PASS END=54060109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 54060110 . G . PASS END=54060115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 54060116 . A . PASS END=54060116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 54060117 . A . PASS END=54060117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 54060118 . A . PASS END=54060121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 54060122 . C . PASS END=54060128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 54060129 . G . PASS END=54060129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 54060130 . G . PASS END=54060131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 54060132 . T . LowGQ END=54060132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:8,0 chr1 54060133 . T . PASS END=54060150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 54060151 . G . PASS END=54060151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 54060152 . C . PASS END=54060156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 54060157 . C . PASS END=54060157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 54060158 . G . PASS END=54060171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 54060172 . T . PASS END=54060172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 54060173 . G . PASS END=54060173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 54060174 . C . PASS END=54060174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 54060175 . A . PASS END=54060178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 54060179 . T . PASS END=54060186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 54060187 . T . PASS END=54060187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 54060188 . G . PASS END=54060214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:13,0 chr1 54060215 . G . PASS END=54060215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 54060216 . G . PASS END=54060220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,488:0,39,255:13,0 chr1 54060221 . G . PASS END=54060238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 54060239 . G . PASS END=54060245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 54060246 . C . PASS END=54060249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 54060250 . A . PASS END=54060250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 54060251 . G . PASS END=54060254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 54060255 . G . PASS END=54060278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,421:0,39,255:13,0 chr1 54060279 . G . PASS END=54060287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 54060288 . A . PASS END=54060290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 54060291 . C . PASS END=54060301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr1 54060302 . A . PASS END=54060302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 54060303 . G . PASS END=54060306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 54060307 . A . PASS END=54060307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 54060308 . T . PASS END=54060311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 54060312 . G . PASS END=54060327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 54060328 . G . PASS END=54060328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 54060329 . A . PASS END=54060333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 54060334 . C . PASS END=54060340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 54060341 . A . PASS END=54060341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 54060342 . G . PASS END=54060343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 54060344 . A . PASS END=54060353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 54060354 . G . PASS END=54060354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr1 54060355 . G . PASS END=54060366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 54060367 . A . PASS END=54060368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 54060369 . G . PASS END=54060373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 54060374 . A . PASS END=54060374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 54060375 . G . PASS END=54060395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,44,255:19,0 chr1 54060396 . G . PASS END=54060410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 54060411 . G . PASS END=54060411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 54060412 . G . PASS END=54060430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,809:0,66,255:23,0 chr1 54060431 . G . PASS END=54060431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:20,0 chr1 54060432 . G . PASS END=54060435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 54060436 . G . PASS END=54060437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,815:0,53,255:21,0 chr1 54060438 . G . PASS END=54060440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 54060441 . G . PASS END=54060442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 54060443 . G . PASS END=54060443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 54060444 . T . PASS END=54060444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 54060445 . T . PASS END=54060452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:24,0 chr1 54060453 . C . PASS END=54060453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 54060454 . A . PASS END=54060465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 54060466 . G . PASS END=54060467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54060468 . A . PASS END=54060469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 54060470 . G . PASS END=54060472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 54060473 . C . PASS END=54060482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1015:0,71,255:25,0 chr1 54060483 . G . PASS END=54060483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:23,0 chr1 54060484 . A . PASS END=54060486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 54060487 . C . PASS END=54060497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 54060498 . G . PASS END=54060498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 54060499 . A . PASS END=54060659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1156:0,83,255:40,0 chr1 54060660 . T . PASS END=54060663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,80,255:25,0 chr1 54065774 . C . PASS END=54065777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 54065778 . C T, 73.63 PASS DP=9;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,4,0:0,5,0:24:111,27,0,304,27,304:255,27,0:0,0:7.3635e+01,2.3635e+01,1.8854e-02,3.0074e+02,5.8405e+01,3.0374e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,1:0,0,3,6 chr1 54065779 . A . PASS END=54065804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 54065805 . C . PASS END=54065830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 54065831 . G T, 86.12 PASS DP=13;MQ=248.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,5,0:0,8,0:36:124,39,0,494,39,494:255,39,0:0,0:8.6124e+01,3.6124e+01,1.0607e-03,4.5000e+02,7.0894e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,3:0,0,8,5 chr1 54065832 . G . PASS END=54065844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 54065845 . A . PASS END=54065845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 54065846 . G . PASS END=54065861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:12,0 chr1 54065862 . G . PASS END=54065862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 54065863 . G . PASS END=54065868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 54065869 . G . PASS END=54065886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 54065887 . A . PASS END=54065920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr1 54065921 . C . PASS END=54065923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 54065924 . G A, 95.16 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:133,48,0,618,48,618:255,48,0:0,0:9.5155e+01,4.5155e+01,1.3254e-04,4.5000e+02,7.9925e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,10:0,0,12,4 chr1 54065925 . G . PASS END=54065926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 54065927 . G . PASS END=54065927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 54065928 . T . PASS END=54065929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 54065930 . C . PASS END=54065933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 54065934 . G . PASS END=54065949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 54065950 . C . PASS END=54065951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 54203479 . C . PASS END=54203481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 54203482 . T . LowGQ END=54203482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 54203483 . C . PASS END=54203486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 54203487 . G . PASS END=54203487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 54203488 . C . PASS END=54203503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 54203504 . T . PASS END=54203504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 54203505 . G . PASS END=54203515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 54203516 . T . PASS END=54203524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 54203525 . G . PASS END=54203582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 54203583 . T . PASS END=54203583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 54203584 . C . PASS END=54203589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 54203590 . G . PASS END=54203605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:6:0,18,233:0,18,233:6,0 chr1 54203606 . G . PASS END=54203616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 54203617 . T . PASS END=54203617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 54203618 . C . PASS END=54203624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 54203625 . A . PASS END=54203630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 54203631 . A . LowGQ END=54203631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:5,0 chr1 54203632 . A . PASS END=54203670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 54203671 . G A, 0.17 DRAGENSnpHardQUAL DP=6;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:5,1,0:0.167,0.000:6:5,0,0:0,1,0:14:21,0,50,36,171,207:21,0,168:5,0:1.6748e-01,1.4223e+01,6.7223e+01,4.9983e+01,2.1977e+02,2.2376e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,0,1:4,1,1,0:54203671 chr1 54203672 . G . PASS END=54203677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 54203678 . C T, 0.17 DRAGENSnpHardQUAL DP=6;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:5,1,0:0.167,0.000:6:4,1,0:1,0,0:14:21,0,50,36,179,215:21,0,176:5,0:1.6736e-01,1.4226e+01,6.7226e+01,4.9986e+01,2.2777e+02,2.3176e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,1,0:4,1,1,0:54203671 chr1 54203679 . G . PASS END=54203703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 54203704 . T . PASS END=54203704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 54203705 . G . PASS END=54203711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:6,0 chr1 54203712 . T . PASS END=54203717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:6:0,9,135:0,18,202:3,0 chr1 54203718 . T . PASS END=54203737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,72:0,9,72:3,0 chr1 54233643 . C . PASS END=54233706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:88:0,120,1800:0,255,255:40,0 chr1 54238002 . T . PASS END=54238162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:92:44:0,92,1544:0,92,255:40,0 chr1 54252831 . C . PASS END=54252894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,132,255:40,0 chr1 54252895 . T . PASS END=54252931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:48:0,99,1485:0,114,255:40,0 chr1 54254806 . C . PASS END=54254869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:54:0,120,1800:0,145,255:40,0 chr1 54258902 . C . PASS END=54258952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:83:0,120,1800:0,222,255:40,0 chr1 54262362 . C . PASS END=54262477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:45:0,91,1378:0,91,255:40,0 chr1 54262572 . C . PASS END=54262590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1126:0,82,255:33,0 chr1 54262591 . T . PASS END=54262591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,977:0,49,255:31,0 chr1 54262592 . C . PASS END=54262609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:34:0,80,1180:0,80,255:36,0 chr1 54262610 . A . PASS END=54262610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1263:0,50,255:31,0 chr1 54262611 . G . PASS END=54262817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,102,1620:0,102,255:40,0 chr1 54266366 . C . PASS END=54266511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:39:0,96,1488:0,96,255:40,0 chr1 54266512 . G . PASS END=54266512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:34,0 chr1 54266513 . G . PASS END=54266518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:34,0 chr1 54266519 . C . PASS END=54266521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,81,255:25,0 chr1 54269601 . C . PASS END=54269682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:43:0,87,1305:0,125,255:40,0 chr1 54272098 . C . PASS END=54272190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:66:0,120,1800:0,188,255:40,0 chr1 54273329 . C . PASS END=54273352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1078:0,80,255:36,0 chr1 54273353 . T . PASS END=54273353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:33,0 chr1 54273354 . A . PASS END=54273439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,91,255:40,0 chr1 54273440 . T . PASS END=54273451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,68,255:26,0 chr1 54273452 . C . PASS END=54273464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:20:0,51,765:0,60,255:19,0 chr1 54275368 . T . PASS END=54275419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:73:0,120,1800:0,191,255:40,0 chr1 54284644 . C . PASS END=54284752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:56:0,120,1800:0,151,255:40,0 chr1 54291471 . C . PASS END=54291609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:38:0,102,1575:0,102,255:40,0 chr1 54293672 . C . PASS END=54293673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 54293674 . G . PASS END=54293676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr1 54293677 . A . PASS END=54293677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 54293678 . G . PASS END=54293680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 54293681 . C . PASS END=54293681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 54293682 . C . PASS END=54293729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:30:0,86,1205:0,86,255:40,0 chr1 54293730 . C . PASS END=54293730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1700:0,78,255:40,0 chr1 54293731 . A . PASS END=54293800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:34:0,99,1485:0,102,255:40,0 chr1 54293801 . A . PASS END=54293801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:33,0 chr1 54293802 . T . PASS END=54293817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1194:0,83,255:33,0 chr1 54293818 . T . PASS END=54293818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 54293819 . A . PASS END=54293819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:25,0 chr1 54293820 . G . PASS END=54293822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54293823 . T . PASS END=54293841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,68,255:26,0 chr1 54293842 . C . PASS END=54293842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 54293843 . A . PASS END=54293846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 54298163 . C . PASS END=54298264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:55:0,101,1718:0,101,255:40,0 chr1 54301173 . C . PASS END=54301293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:34:0,102,1280:0,102,255:40,0 chr1 54303580 . T . PASS END=54303633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:82:0,120,1800:0,247,255:40,0 chr1 54303878 . G . PASS END=54303878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 54303879 . C . PASS END=54303880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,999:0,81,255:27,0 chr1 54303881 . C . PASS END=54303882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 54303883 . A . PASS END=54303884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54303885 . A . PASS END=54303885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:26,0 chr1 54303886 . G . PASS END=54303886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54303887 . T . PASS END=54303887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 54303888 . A . PASS END=54303891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54303892 . C . PASS END=54303917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,894:0,64,255:25,0 chr1 54303918 . C . PASS END=54303918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 54303919 . T . PASS END=54303927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 54303928 . T . PASS END=54303928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 54303929 . G . PASS END=54303934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 54325737 . T . PASS END=54325826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:36:0,96,1334:0,98,255:40,0 chr1 54331873 . C . PASS END=54331892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,807:0,66,255:26,0 chr1 54331893 . G . PASS END=54331894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 54331895 . A . PASS END=54331896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 54331897 . A . PASS END=54331912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1011:0,84,255:29,0 chr1 54331913 . G . PASS END=54331913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 54331914 . T . PASS END=54332055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1177:0,80,255:40,0 chr1 54332431 . T . PASS END=54332584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:31:0,84,1260:0,93,255:40,0 chr1 54332585 . G . PASS END=54332595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,68,255:24,0 chr1 54332596 . C . PASS END=54332597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:24:0,57,855:0,72,255:19,0 chr1 54337045 . C . PASS END=54337149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,93,255:40,0 chr1 54337150 . T . PASS END=54337161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:64:27:0,64,939:0,64,255:25,0 chr1 54343988 . C . PASS END=54344075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,148,255:40,0 chr1 54344315 . C . PASS END=54344395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,104,1513:0,104,255:40,0 chr1 54348786 . C . PASS END=54348788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 54348789 . A . PASS END=54348789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 54348790 . G . PASS END=54348790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 54348791 . T . PASS END=54348797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 54348798 . A . PASS END=54348798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 54348799 . G . PASS END=54348803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 54348804 . A . PASS END=54348804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 54348805 . T . PASS END=54348811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 54348812 . C . PASS END=54348813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 54348814 . A . PASS END=54348815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 54348816 . T . PASS END=54348816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 54348817 . A . PASS END=54348817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 54348818 . A . PASS END=54348818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 54348819 . C . PASS END=54348819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:21,0 chr1 54348820 . T . PASS END=54348824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr1 54348825 . A . PASS END=54348825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,721:0,39,255:22,0 chr1 54348826 . T . PASS END=54348826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 54348827 . C . PASS END=54348827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 54348828 . T . PASS END=54348831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 54348832 . T . PASS END=54348832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:23,0 chr1 54348833 . C . PASS END=54348842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,914:0,62,255:25,0 chr1 54348843 . G . PASS END=54348843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:21,0 chr1 54348844 . C . PASS END=54348844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:22,0 chr1 54348845 . C . PASS END=54348845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,922:0,34,255:21,0 chr1 54348846 . T . PASS END=54348847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 54348848 . T . PASS END=54348853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:54:27:0,54,810:0,65,255:19,0 chr1 54348854 . A . PASS END=54348856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 54348857 . C . PASS END=54348858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 54348859 . G . PASS END=54348860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 54348861 . C . PASS END=54348861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 54348862 . T . PASS END=54348864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 54348865 . T . PASS END=54348865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 54348866 . G . PASS END=54348867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 54348868 . T . PASS END=54348868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:23,0 chr1 54348869 . T . PASS END=54348869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 54348870 . T . PASS END=54348870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 54348871 . G . PASS END=54348892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 54348893 . T . PASS END=54348893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 54348894 . G . PASS END=54348894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 54348895 . T . PASS END=54348895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,672:0,52,255:20,0 chr1 54348896 . T . PASS END=54348905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 54348906 . G . PASS END=54348906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr1 54348907 . G . PASS END=54348915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 54348916 . T . PASS END=54348916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,563:0,46,255:19,0 chr1 54348917 . T . PASS END=54348920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 54348921 . T . PASS END=54348949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 54354580 . C . PASS END=54354610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,126,255:40,0 chr1 54359884 . A . PASS END=54359892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 54359893 . C . PASS END=54359911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:18,0 chr1 54359912 . T . PASS END=54359912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 54359913 . G . PASS END=54359928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 54359929 . C . PASS END=54359929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 54359930 . T . PASS END=54359941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 54359942 . C . PASS END=54359979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,870:0,63,255:25,0 chr1 54359980 . T . PASS END=54359980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 54359981 . T . PASS END=54360015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,947:0,75,255:26,0 chr1 54360016 . G . PASS END=54360020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 54360021 . G . PASS END=54360027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,834:0,67,255:26,0 chr1 54360028 . G . PASS END=54360029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 54360030 . T . PASS END=54360030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 54360031 . A . PASS END=54360031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 54360032 . T . PASS END=54360032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 54360033 . G . PASS END=54360033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54360034 . A . PASS END=54360041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 54360042 . C . PASS END=54360043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 54360044 . C . PASS END=54360047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1000:0,70,255:26,0 chr1 54360048 . T . PASS END=54360048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:26,0 chr1 54360049 . T . PASS END=54360057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr1 54360058 . G . PASS END=54360058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:24,0 chr1 54360059 . A . PASS END=54360067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 54360068 . T . PASS END=54360082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 54360083 . G . PASS END=54360087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 54360088 . C . PASS END=54360088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 54360089 . A . PASS END=54360110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,832:0,61,255:26,0 chr1 54360111 . G . PASS END=54360130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:31,0 chr1 54360131 . A . PASS END=54360131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1041:0,63,255:27,0 chr1 54360132 . G . PASS END=54360160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1141:0,90,255:31,0 chr1 54360161 . C . PASS END=54360164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1062:0,74,255:26,0 chr1 54360165 . C . PASS END=54360166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 54360167 . G . PASS END=54360171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 54360172 . G . PASS END=54360174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 54360175 . G . PASS END=54360202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,845:0,69,255:26,0 chr1 54360203 . T . PASS END=54360203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 54360204 . T . PASS END=54360206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 54360207 . G . PASS END=54360207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 54360208 . G . PASS END=54360210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 54360211 . T . PASS END=54360220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 54370339 . G . PASS END=54370482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:47:0,108,1658:0,108,255:40,0 chr1 54371768 . A . PASS END=54371780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:73:26:0,73,865:0,73,255:27,0 chr1 54371781 . T . PASS END=54371788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1064:0,90,255:30,0 chr1 54371789 . A . PASS END=54371789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 54371790 . C . PASS END=54371849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1097:0,86,255:37,0 chr1 54371850 . G . PASS END=54371850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 54371851 . G . PASS END=54371857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:35,0 chr1 54371858 . G . PASS END=54371858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:31,0 chr1 54371859 . C . PASS END=54371914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,86,255:35,0 chr1 54371915 . C . PASS END=54371915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 54371916 . A . PASS END=54371917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 54371918 . C . PASS END=54371932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,962:0,67,255:26,0 chr1 54371933 . T . PASS END=54371936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 54371937 . C . PASS END=54371951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:20,0 chr1 54371952 . C . PASS END=54371967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:19,0 chr1 54375604 . G . PASS END=54375607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr1 54375608 . A . PASS END=54375663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:37:0,95,1355:0,95,255:40,0 chr1 54375664 . C . PASS END=54375672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:35,0 chr1 54382463 . T . PASS END=54382501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1119:0,82,255:35,0 chr1 54382502 . T . PASS END=54382502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr1 54382503 . A . PASS END=54382504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1158:0,88,255:31,0 chr1 54382505 . T . PASS END=54382505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1103:0,58,255:30,0 chr1 54382506 . C . PASS END=54382506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 54382507 . T . PASS END=54382507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 54382508 . T . PASS END=54382508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1036:0,57,255:30,0 chr1 54382509 . C . PASS END=54382512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1127:0,93,255:31,0 chr1 54382513 . A . PASS END=54382513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 54382514 . T . PASS END=54382514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54382515 . T . PASS END=54382515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:29,0 chr1 54382516 . T . PASS END=54382519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54382520 . A . PASS END=54382521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 54382522 . T . PASS END=54382531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 54382532 . G . PASS END=54382532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1045:0,38,255:27,0 chr1 54382533 . G . PASS END=54382538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 54382539 . G . PASS END=54382541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 54382542 . C . PASS END=54382544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54382545 . T . PASS END=54382546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 54382547 . G . PASS END=54382547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 54382548 . C . PASS END=54382550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 54382551 . A . PASS END=54382562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:47:26:0,47,810:0,47,255:19,0 chr1 54382563 . C . PASS END=54382563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,659:0,16,255:18,0 chr1 54382564 . C . PASS END=54382567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 54387324 . T . PASS END=54387336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 54387337 . T . PASS END=54387337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,894:0,32,255:24,0 chr1 54387338 . T . PASS END=54387338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:25,0 chr1 54387339 . T . PASS END=54387439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1036:0,81,255:40,0 chr1 54387440 . C . PASS END=54387440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 54389556 . C . PASS END=54389620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,0:131:99:84:0,120,1800:0,241,255:40,0 chr1 54394045 . C . PASS END=54394113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,162,255:40,0 chr1 54395692 . T . PASS END=54395724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,10:85:88:79:0,88,1800:0,88,255:40,0 chr1 54395725 . G . PASS END=54395818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:51:0,120,1800:0,126,255:40,1 chr1 54405658 . C . PASS END=54405755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:41:0,87,1406:0,87,255:40,0 chr1 54417673 . A . PASS END=54417730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,972:0,81,255:33,0 chr1 54417731 . A . PASS END=54417731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 54417732 . A . PASS END=54417732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54417733 . A . PASS END=54417733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 54417734 . A . PASS END=54417734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54417735 . T . PASS END=54417735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:29,0 chr1 54417736 . G . PASS END=54417745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 54417746 . A . PASS END=54417749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1044:0,65,255:26,0 chr1 54417750 . G . PASS END=54417750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 54417751 . G . PASS END=54417753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 54417754 . A . PASS END=54417755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1031:0,71,255:28,0 chr1 54417756 . T . PASS END=54418028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1119:0,85,255:40,0 chr1 54418029 . C . PASS END=54418040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:27:0,78,1170:0,81,255:26,0 chr1 54418041 . A . PASS END=54418041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54418042 . G . PASS END=54418049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 54418050 . G . PASS END=54418052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54418053 . A . PASS END=54418053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 54418054 . T . PASS END=54418055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54418056 . C . PASS END=54418063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 54418064 . C . PASS END=54418064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54418065 . A . PASS END=54418066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 54418067 . G . PASS END=54418069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 54418070 . C . PASS END=54418084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:22,0 chr1 54418085 . T . PASS END=54418096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 54418097 . C . PASS END=54418100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 54418101 . G . PASS END=54418101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 54418102 . G . PASS END=54418109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,683:0,60,255:20,0 chr1 54418110 . A . PASS END=54418121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:18,0 chr1 54418122 . T . PASS END=54418145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,351:0,39,255:13,0 chr1 54423822 . G . PASS END=54423953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,99,1485:0,149,255:40,0 chr1 54426029 . T . PASS END=54426147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,105,1575:0,114,255:40,0 chr1 54427707 . G . PASS END=54427795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:49:0,120,1800:0,147,255:40,0 chr1 54427969 . G . PASS END=54428013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1047:0,96,255:36,0 chr1 54428014 . G . PASS END=54428014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr1 54428015 . T . PASS END=54428061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1133:0,80,255:35,0 chr1 54428062 . A . PASS END=54428062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 54428063 . C . PASS END=54428064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 54428065 . G . PASS END=54428068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 54428069 . G . PASS END=54428077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:21:0,57,855:0,63,255:19,0 chr1 54428078 . A . PASS END=54428082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr1 54431969 . A . PASS END=54432034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1108:0,87,255:37,0 chr1 54432035 . G . PASS END=54432053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,80,255:26,0 chr1 54433338 . A . PASS END=54433361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,668:0,41,255:19,0 chr1 54433362 . C . PASS END=54433366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr1 54433367 . C . PASS END=54433367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 54433368 . T . PASS END=54433370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 54433371 . A . PASS END=54433397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1188:0,84,255:34,0 chr1 54433398 . A . PASS END=54433398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1119:0,75,255:33,0 chr1 54433399 . C . PASS END=54433509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1243:0,89,255:40,0 chr1 54433510 . T . PASS END=54433510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1363:0,71,255:31,0 chr1 54433511 . T . PASS END=54433558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:37:0,95,1333:0,95,255:40,0 chr1 54433559 . C . PASS END=54433559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:31,0 chr1 54433560 . A . PASS END=54433565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1312:0,94,255:32,0 chr1 54433566 . A . PASS END=54433566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1089:0,72,255:28,0 chr1 54433567 . T . PASS END=54433580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:30,0 chr1 54433581 . T . PASS END=54433608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,740:0,61,255:26,0 chr1 54433609 . T . PASS END=54433610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 54433611 . G . PASS END=54433612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 54474655 . T . PASS END=54474659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 54474660 . G . PASS END=54474677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:21:0,61,778:0,61,255:26,0 chr1 54474678 . C . PASS END=54474686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 54474687 . A . PASS END=54474687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 54474688 . G . PASS END=54474692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:30,0 chr1 54474693 . A . PASS END=54474693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 54474694 . G . PASS END=54474765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:32,0 chr1 54474766 . G . PASS END=54474766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,961:0,79,255:28,0 chr1 54474767 . C . PASS END=54474775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 54474776 . C . PASS END=54474792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 54474793 . G . PASS END=54474801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,66,255:19,0 chr1 54474802 . T . PASS END=54474803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,63,255:12,0 chr1 54475955 . C . PASS END=54476083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:39:0,100,1366:0,100,255:40,0 chr1 54477816 . G . PASS END=54477953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1047:0,84,255:40,0 chr1 54479909 . C . PASS END=54479910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 54479911 . G . PASS END=54479911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr1 54479912 . G . PASS END=54479912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 54479913 . G . PASS END=54479913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 54479914 . G . PASS END=54479917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 54479918 . A . PASS END=54479918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 54479919 . T . PASS END=54479924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 54479925 . G . PASS END=54479930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 54479931 . A . PASS END=54479931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 54479932 . A . PASS END=54479936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:28,0 chr1 54479937 . G . PASS END=54479937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 54479938 . G . PASS END=54479938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 54479939 . T . PASS END=54479939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 54479940 . G . PASS END=54479942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr1 54479943 . C . PASS END=54479943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:29,0 chr1 54479944 . A . PASS END=54479945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 54479946 . G . PASS END=54479946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 54479947 . G . PASS END=54479947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 54479948 . C . PASS END=54479952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 54479953 . A . PASS END=54479953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,947:0,21,255:28,0 chr1 54479954 . G . PASS END=54479954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 54479955 . G . PASS END=54479955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 54479956 . G . PASS END=54479956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:28,0 chr1 54479957 . C . PASS END=54479957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 54479958 . C . PASS END=54479959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54479960 . C . PASS END=54479961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 54479962 . A . PASS END=54479962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1008:0,38,255:29,0 chr1 54479963 . C . PASS END=54479963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54479964 . A . PASS END=54479964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:30,0 chr1 54479965 . G . PASS END=54479966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54479967 . T . PASS END=54479967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 54479968 . G . PASS END=54479973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:30,0 chr1 54479974 . A . PASS END=54479974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 54479975 . G . PASS END=54479979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:30,0 chr1 54479980 . A . PASS END=54479981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 54479982 . C . PASS END=54479994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 54479995 . A . PASS END=54479995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,931:0,29,255:24,0 chr1 54479996 . G . PASS END=54480006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 54480007 . C . PASS END=54480011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 54480012 . T . PASS END=54480012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:23,0 chr1 54480013 . G . PASS END=54480013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 54480014 . A . PASS END=54480014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:19,0 chr1 54480015 . G . PASS END=54480020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:20,0 chr1 54480021 . G . PASS END=54480021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 54480022 . A . PASS END=54480022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,792:0,9,255:16,0 chr1 54480023 . G . PASS END=54480037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,613:0,40,255:19,0 chr1 54483049 . C . PASS END=54483100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:33:0,99,1227:0,99,255:40,0 chr1 54483765 . C . PASS END=54483765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 54483766 . T . PASS END=54483773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 54483774 . G . PASS END=54483812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1095:0,87,255:32,0 chr1 54483813 . G . PASS END=54483836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,819:0,61,255:26,0 chr1 54483837 . G . PASS END=54483838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 54483839 . G . PASS END=54483843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 54483844 . C . PASS END=54483849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 54497823 . T . PASS END=54497945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:56:0,116,1800:0,116,255:40,0 chr1 54497946 . C . PASS END=54497978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,134,255:40,0 chr1 54502272 . A . PASS END=54502311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:46:0,91,1556:0,91,255:40,0 chr1 54502312 . T . PASS END=54502391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:53:0,120,1800:0,126,255:40,0 chr1 54506429 . A . PASS END=54506513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,1:119:99:89:0,120,1800:0,251,255:40,0 chr1 54507397 . A . PASS END=54507478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:42:0,85,1452:0,85,255:40,0 chr1 54509046 . C . PASS END=54509094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1049:0,80,255:35,0 chr1 54509095 . G . PASS END=54509095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 54509096 . A . PASS END=54509096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 54509097 . A . PASS END=54509097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:34,0 chr1 54509098 . G . PASS END=54509198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:36:0,81,1152:0,81,255:40,0 chr1 54511317 . T . PASS END=54511448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:33:0,87,1202:0,96,255:40,0 chr1 54511449 . T . PASS END=54511459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:33:0,66,990:0,99,255:25,0 chr1 54512940 . C . PASS END=54512990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,122,255:40,0 chr1 54512991 . A . PASS END=54512991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,7:64:61:64:0,61,1696:0,61,255:40,0 chr1 54512992 . C . PASS END=54513044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:42:0,87,1305:0,108,255:40,0 chr1 54513045 . C . PASS END=54513045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:75:42:0,75,1125:0,95,255:24,0 chr1 54514323 . T . PASS END=54514323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 54514324 . A . PASS END=54514327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,917:0,64,255:26,0 chr1 54514328 . G . PASS END=54514329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 54514330 . T . PASS END=54514332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 54514333 . A . PASS END=54514343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:31,0 chr1 54514344 . A . PASS END=54514344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,975:0,79,255:28,0 chr1 54514345 . C . PASS END=54514351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 54514352 . A . PASS END=54514352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 54514353 . C . PASS END=54514355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1117:0,90,255:30,0 chr1 54518673 . C . PASS END=54518675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,906:0,62,255:23,0 chr1 54518676 . A . PASS END=54518676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 54518677 . G . PASS END=54518682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,931:0,75,255:26,0 chr1 54518683 . G . PASS END=54518683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 54518684 . T . PASS END=54518684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 54518685 . G . PASS END=54518701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1133:0,84,255:31,0 chr1 54518702 . A . PASS END=54518702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr1 54518703 . C . PASS END=54518764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1059:0,80,255:36,0 chr1 54518765 . C . PASS END=54518765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 54518766 . G . PASS END=54518769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 54518770 . C . PASS END=54518770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr1 54518771 . C . PASS END=54518809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1086:0,83,255:31,0 chr1 54518810 . G . PASS END=54518856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,900:0,63,255:27,0 chr1 54518857 . G . PASS END=54518861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 54520006 . A . PASS END=54520187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:32:0,81,1215:0,83,255:40,0 chr1 54520188 . A . PASS END=54520197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:25,0 chr1 54534429 . A . PASS END=54534570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:87:48:0,87,1305:0,117,255:40,0 chr1 54554270 . G . PASS END=54554463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:95:38:0,95,1255:0,95,255:40,1 chr1 54561958 . A . PASS END=54561959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 54561960 . G . PASS END=54561960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 54561961 . G . PASS END=54561962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 54561963 . T . PASS END=54561963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 54561964 . C . PASS END=54561971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 54561972 . G . PASS END=54561972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 54561973 . G . PASS END=54561973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 54561974 . T . PASS END=54561975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 54561976 . G . PASS END=54561986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,665:0,41,255:19,0 chr1 54561987 . A . PASS END=54561989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 54561990 . G . PASS END=54561990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 54561991 . G . PASS END=54562006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:25,0 chr1 54562007 . G . PASS END=54562008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 54562009 . T . PASS END=54562009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 54562010 . C . PASS END=54562046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1078:0,80,255:32,0 chr1 54562047 . A . PASS END=54562047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1062:0,79,255:28,0 chr1 54562048 . G . PASS END=54562060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 54562061 . C . PASS END=54562061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 54562062 . A . PASS END=54562089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr1 54562090 . C . PASS END=54562117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,853:0,69,255:25,0 chr1 54562118 . G . PASS END=54562146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 54570141 . A . PASS END=54570170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:75:0,120,1800:0,176,255:40,0 chr1 54570171 . T . PASS END=54570212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:104:0,120,1800:0,255,255:40,0 chr1 54570213 . A . LowGQ END=54570214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,10:106:0:105:0,0,3230:33,0,255:40,17 chr1 54570215 . T . PASS END=54570256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:93:0,120,1800:0,230,255:40,0 chr1 54570257 . C . PASS END=54570275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:65:0,120,1800:0,195,255:40,0 chr1 54576725 . A . PASS END=54576744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 54576745 . A . PASS END=54576790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,784:0,62,255:26,0 chr1 54576791 . G . PASS END=54576793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:27,0 chr1 54576794 . T . PASS END=54576795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 54576796 . G . PASS END=54576796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 54576797 . C . PASS END=54576797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 54576798 . C . PASS END=54576946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:30:0,84,1260:0,85,255:40,0 chr1 54576947 . T . PASS END=54576979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,945:0,62,255:26,0 chr1 54598641 . T . PASS END=54598641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54598642 . C . PASS END=54598642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 54598643 . A . PASS END=54598643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 54598644 . A . PASS END=54598644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 54598645 . A . PASS END=54598646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1018:0,90,255:30,0 chr1 54598647 . C . PASS END=54598647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 54598648 . A . PASS END=54598755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1106:0,81,255:38,0 chr1 54598756 . A . PASS END=54598756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr1 54598757 . G . PASS END=54598835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1194:0,83,255:36,0 chr1 54598836 . A . PASS END=54598836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:26,0 chr1 54598837 . G . PASS END=54598839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 54598840 . A . PASS END=54598841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 54598842 . C . PASS END=54598853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1025:0,84,255:28,0 chr1 54598854 . A . PASS END=54598857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 54598858 . T . PASS END=54598860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 54598861 . T . PASS END=54598867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr1 54598868 . G . PASS END=54598868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54598869 . T . PASS END=54598869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 54598870 . G . PASS END=54598871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54598872 . C . PASS END=54598872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 54598873 . T . PASS END=54598889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,946:0,81,255:28,0 chr1 54598890 . C . PASS END=54598928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,833:0,67,255:26,0 chr1 54598929 . G . PASS END=54598948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,50,255:19,0 chr1 54598949 . C . PASS END=54598954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:37:18:0,37,585:0,37,255:13,0 chr1 54598955 . T . PASS END=54598959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 54598960 . T . PASS END=54598960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 54598961 . T . PASS END=54598967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 54602303 . C . PASS END=54602303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 54602304 . T . PASS END=54602306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 54602307 . G . PASS END=54602309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:17,0 chr1 54602310 . T . PASS END=54602311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 54602312 . A . PASS END=54602312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 54602313 . G . PASS END=54602314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 54602315 . G . PASS END=54602317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 54602318 . G . PASS END=54602319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 54602320 . A . PASS END=54602320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,715:0,35,255:19,0 chr1 54602321 . G . PASS END=54602321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 54602322 . G . PASS END=54602322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 54602323 . T . PASS END=54602324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 54602325 . T . PASS END=54602328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,767:0,50,255:20,0 chr1 54602329 . A . PASS END=54602344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:23,0 chr1 54602345 . G . PASS END=54602345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 54602346 . A . PASS END=54602346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 54602347 . G A, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,10,0:0,13,0:66:154,69,0,884,69,884:255,69,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,9:0,0,13,10 chr1 54602348 . G . PASS END=54602360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:25,0 chr1 54602361 . T . PASS END=54602361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 54602362 . C . PASS END=54602369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 54602370 . G . PASS END=54602383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1037:0,84,255:28,0 chr1 54602384 . G . PASS END=54602384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 54602385 . C . PASS END=54602385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 54602386 . C . PASS END=54602386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:25,0 chr1 54602387 . C . PASS END=54602403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,77,255:26,0 chr1 54602404 . G . PASS END=54602410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 54602411 . C . PASS END=54602411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,1 chr1 54602412 . G . PASS END=54602412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:62:32:0,62,1151:0,62,255:29,1 chr1 54602413 . G . PASS END=54602413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 54602414 . G . PASS END=54602432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 54602433 . A . PASS END=54602433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1009:0,54,255:29,0 chr1 54602434 . T . PASS END=54602437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 54602438 . G . PASS END=54602438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 54602439 . A . PASS END=54602450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 54602451 . G . PASS END=54602481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:26,0 chr1 54605193 . T . PASS END=54605211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1167:0,92,255:40,0 chr1 54605212 . G . PASS END=54605212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1272:0,70,255:37,0 chr1 54605213 . C . PASS END=54605273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:40:0,80,1368:0,80,255:40,0 chr1 54605274 . G . PASS END=54605279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:46:0,81,1215:0,105,255:29,0 chr1 54605280 . G . PASS END=54605288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:60:44:0,60,900:0,99,255:26,0 chr1 54605289 . A . PASS END=54605294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:45:44:0,45,675:0,115,255:19,0 chr1 54605295 . A . PASS END=54605299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:39:43:0,39,585:0,129,255:13,0 chr1 54605300 . G . PASS END=54605300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:27:43:0,27,405:0,129,255:9,0 chr1 54605301 . C . PASS END=54605303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:30:43:0,30,450:0,129,255:10,0 chr1 54605304 . G . PASS END=54605307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:21:42:0,21,315:0,116,255:9,0 chr1 54605308 . A . PASS END=54605311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:12:41:0,12,180:0,123,255:6,0 chr1 54605312 . C . LowGQ END=54605317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:39,1:40:0:39:0,0,0:0,87,255:3,0 chr1 54605318 . T TG, 40.67 PASS DP=39;MQ=250.00;MQRankSum=4.421;ReadPosRankSum=1.059;FractionInformativeReads=0.923;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,9,0:0.250,0.000:36:11,6,0:16,3,0:40:64,0,47,164,164,164:113,0,255:0,13:4.0673e+01,4.1549e-04,5.0000e+01,1.7544e+02,1.9844e+02,1.7845e+02:0.00,23.00,26.01,34.77,57.77,37.78:10,17,6,3:18,9,5,4 chr1 54605319 . G GC, 50.00 PASS DP=39;MQ=250.00;MQRankSum=4.914;ReadPosRankSum=0.350;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,27,0:0.692,0.000:39:9,11,0:3,16,0:40:73,0,38,173,173,173:255,0,155:8,35:5.0000e+01,4.1549e-04,4.0673e+01,1.8477e+02,2.0777e+02,1.8778e+02:0.00,23.00,26.01,34.77,57.77,37.78:8,4,10,17:7,5,18,9 chr1 54605320 . G . LowGQ END=54605320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:12,27:39:0:39:0,0,0:255,0,255:31,0 chr1 54605321 . G . PASS END=54605325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1263:0,89,255:31,0 chr1 54605326 . G . PASS END=54605327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1135:0,63,255:33,1 chr1 54605328 . A . PASS END=54605364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,85,255:35,0 chr1 54605365 . G . PASS END=54605382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 54605383 . T . PASS END=54605386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 54605387 . C . PASS END=54605387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:25,0 chr1 54605388 . T . PASS END=54605428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,67,255:26,0 chr1 54605429 . C . PASS END=54605429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54605430 . G . PASS END=54605430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 54605431 . A . PASS END=54605431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54605432 . T . PASS END=54605432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,921:0,51,255:25,0 chr1 54605433 . G . PASS END=54605435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 54605436 . G . PASS END=54605440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 54605441 . C . PASS END=54605441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:24,0 chr1 54605442 . A . PASS END=54605460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 54605461 . G . PASS END=54605462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54605463 . G . PASS END=54605463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr1 54605464 . C . PASS END=54605489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:30,0 chr1 54605490 . A . PASS END=54605490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr1 54605491 . A . PASS END=54605499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1141:0,87,255:30,0 chr1 54605500 . T . PASS END=54605500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 54605501 . G . PASS END=54605536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:33,0 chr1 54605537 . A . PASS END=54605537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 54605538 . C . PASS END=54605540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 54605541 . A . PASS END=54605541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,898:0,73,255:28,0 chr1 54605542 . T . PASS END=54605546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 54605547 . C . PASS END=54605549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 54605550 . C . PASS END=54605553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 54605554 . G . PASS END=54605557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1030:0,68,255:26,0 chr1 54605558 . C . PASS END=54605559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 54605560 . T . PASS END=54605562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 54605563 . T . PASS END=54605566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1164:0,83,255:28,0 chr1 54605567 . T . PASS END=54605567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 54605568 . G . PASS END=54605570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 54605571 . C . PASS END=54605573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 54605574 . A . PASS END=54605595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:30,0 chr1 54605596 . A . PASS END=54605597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 54605598 . G . PASS END=54605600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 54605601 . A . PASS END=54605611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1014:0,68,255:25,0 chr1 54605612 . T . PASS END=54605612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54605613 . C . PASS END=54605624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,77,255:26,0 chr1 54605625 . C . PASS END=54605627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54605628 . C . PASS END=54605670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 54605671 . G . PASS END=54605671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 54605672 . G . PASS END=54605704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,870:0,75,255:26,0 chr1 54605705 . T . PASS END=54605705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 54605706 . G . PASS END=54605725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,864:0,61,255:25,0 chr1 54605726 . A . PASS END=54605726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:25,0 chr1 54605727 . C . PASS END=54605742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,852:0,61,255:26,0 chr1 54605743 . T . PASS END=54605743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:23,0 chr1 54605744 . T . PASS END=54605750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 54605751 . C . PASS END=54605768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:20:0,44,675:0,44,255:19,0 chr1 54605769 . C . PASS END=54605769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 54605770 . T . PASS END=54605770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 54605771 . G . PASS END=54605771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 54605772 . G . PASS END=54605775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 54605776 . T . PASS END=54605779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,512:0,31,255:15,0 chr1 54606771 . C . PASS END=54606772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 54606773 . G . PASS END=54606773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 54606774 . A . PASS END=54606781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,480:0,36,255:13,0 chr1 54606782 . T . PASS END=54606782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,430:0,42,255:14,0 chr1 54606783 . A . PASS END=54606783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:12,0 chr1 54606784 . G . PASS END=54606792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 54606793 . G . PASS END=54606793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 54606794 . C . PASS END=54606803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 54606804 . C T, 47.88 PASS DP=14;MQ=248.17;MQRankSum=2.933;ReadPosRankSum=2.933;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,5,0:0.357,0.000:14:4,2,0:5,3,0:47:83,0,50,179,256,435:152,0,254:9,0:4.7881e+01,9.2414e-05,5.3000e+01,1.7880e+02,2.9105e+02,4.3812e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,2,3:6,3,3,2 chr1 54606805 . G . PASS END=54606824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:15,0 chr1 54606825 . A . PASS END=54606825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 54606826 . G . PASS END=54606826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 54606827 . A . PASS END=54606828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 54606829 . C . LowGQ END=54606829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,457:7,0,255:12,0 chr1 54606830 . A . PASS END=54606831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 54606832 . C . PASS END=54606833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 54606834 . G . PASS END=54606837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 54606838 . T . PASS END=54606838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:13,0 chr1 54606839 . T . PASS END=54606841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 54606842 . T . PASS END=54606851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 54606852 . A . PASS END=54606852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 54606853 . C . PASS END=54606858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 54606859 . G . PASS END=54606890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:19,0 chr1 54606891 . G . PASS END=54606911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,894:0,66,255:25,0 chr1 54606912 . C . PASS END=54606912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 54606913 . C . PASS END=54606916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 54606917 . A . PASS END=54606922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 54606923 . G . PASS END=54606947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1111:0,80,255:32,0 chr1 54606948 . C . PASS END=54606948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr1 54606949 . A . PASS END=54607013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1127:0,82,255:33,0 chr1 54607014 . C . PASS END=54607050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:33:0,81,1140:0,82,255:36,0 chr1 54607051 . A G, 143.30 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,18,0:0,14,0:93:181,96,0,1225,96,1225:255,96,0:0,0:1.4330e+02,9.3305e+01,0.0000e+00,4.5000e+02,1.2807e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,17:0,0,17,15 chr1 54607052 . T . PASS END=54607055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 54607056 . C . PASS END=54607072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:27:0,74,1076:0,74,255:26,0 chr1 54607073 . C . PASS END=54607076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 54607077 . A . PASS END=54607088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 54607089 . G . PASS END=54607098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr1 54607099 . A . PASS END=54607099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 54607100 . C . PASS END=54607101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 54607102 . C . PASS END=54607106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 54610139 . C . PASS END=54610139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 54610140 . T . PASS END=54610140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 54610141 . T . PASS END=54610143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:24,0 chr1 54610144 . T . PASS END=54610144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 54610145 . G . PASS END=54610159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr1 54610160 . A . PASS END=54610164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 54610165 . T . PASS END=54610165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 54610166 . G . PASS END=54610173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:30,0 chr1 54610174 . A . PASS END=54610174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 54610175 . C . PASS END=54610198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 54610199 . C . PASS END=54610199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 54610200 . A . PASS END=54610203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 54610204 . A . PASS END=54610204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:32,0 chr1 54610205 . T . PASS END=54610206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 54610207 . A . PASS END=54610207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:32,0 chr1 54610208 . C . PASS END=54610219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1196:0,85,255:35,0 chr1 54610220 . A . PASS END=54610220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:31,0 chr1 54610221 . G . PASS END=54610230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1318:0,92,255:36,0 chr1 54610231 . G . PASS END=54610231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 54610232 . G . PASS END=54610360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1186:0,83,255:39,0 chr1 54610361 . G . PASS END=54610361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1179:0,66,255:34,0 chr1 54610362 . C . PASS END=54610397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1272:0,89,255:36,0 chr1 54610398 . G . PASS END=54610398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:30,0 chr1 54610399 . C . PASS END=54610468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:34:0,92,1332:0,92,255:40,0 chr1 54610469 . C . PASS END=54610486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:25:0,72,1080:0,75,255:26,0 chr1 54618517 . C . PASS END=54618595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,101,1449:0,101,255:40,0 chr1 54618849 . T . PASS END=54618854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,180,255:40,0 chr1 54640292 . C . PASS END=54640308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:16,0 chr1 54640309 . A . PASS END=54640309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 54640310 . G . PASS END=54640315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,582:0,48,255:19,0 chr1 54640316 . A . PASS END=54640324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:23,0 chr1 54640325 . T . PASS END=54640325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 54640326 . G . PASS END=54640330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,919:0,62,255:26,0 chr1 54640331 . C . PASS END=54640407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1092:0,87,255:38,0 chr1 54640408 . T . PASS END=54640408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr1 54640409 . G . PASS END=54640450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:32,0 chr1 54640451 . G . PASS END=54640457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:25,0 chr1 54640458 . T . PASS END=54640458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,915:0,45,255:21,0 chr1 54640459 . C . PASS END=54640469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr1 54640470 . C . PASS END=54640476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,59,255:19,0 chr1 54640477 . G . PASS END=54640477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 54640478 . C . PASS END=54640495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,613:0,40,255:19,0 chr1 54641289 . T . PASS END=54641333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,103,1366:0,103,255:40,0 chr1 54644822 . C . PASS END=54644825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 54644826 . C . PASS END=54644826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:28,0 chr1 54644827 . T . PASS END=54644981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1090:0,80,255:40,0 chr1 54644982 . G . PASS END=54644990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr1 54644991 . C . PASS END=54645003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 54645004 . C . PASS END=54645015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:26,0 chr1 54645016 . G . PASS END=54645025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:19,0 chr1 54649834 . C . PASS END=54649938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,99,1460:0,108,255:40,0 chr1 54653325 . C . PASS END=54653412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,111,1712:0,111,255:40,0 chr1 54656351 . T . PASS END=54656559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:81:31:0,81,1215:0,91,255:40,0 chr1 54656560 . A . PASS END=54656569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 54661092 . C . PASS END=54661096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 54661097 . A . PASS END=54661102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr1 54661103 . G . PASS END=54661104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 54661105 . C . PASS END=54661289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1096:0,85,255:40,0 chr1 54665917 . A . PASS END=54665956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 54665957 . G . PASS END=54665976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,837:0,66,255:23,0 chr1 54665977 . G . PASS END=54665995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:19:0,50,790:0,50,255:19,0 chr1 54665996 . G . PASS END=54665999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 54666000 . C . PASS END=54666000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 54666001 . G . PASS END=54666012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 54666013 . T . PASS END=54666013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 54666014 . G . PASS END=54666021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 54666022 . C . PASS END=54666022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 54666023 . G . PASS END=54666070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,61,255:25,0 chr1 54666071 . T . PASS END=54666072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54666073 . C . PASS END=54666073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 54666074 . C . PASS END=54666074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54666075 . T . PASS END=54666084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 54666085 . C . PASS END=54666096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr1 54666097 . G . PASS END=54666099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 54666100 . G . PASS END=54666100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54666101 . G . PASS END=54666101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 54666102 . G . PASS END=54666102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 54666103 . A . PASS END=54666104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 54666105 . G . PASS END=54666151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:31,0 chr1 54666152 . A . PASS END=54666152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 54666153 . C . PASS END=54666180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1218:0,86,255:33,0 chr1 54666181 . C . PASS END=54666181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 54666182 . G . PASS END=54666185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 54666186 . G . PASS END=54666186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1169:0,47,255:30,0 chr1 54666187 . C . PASS END=54666196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:32,0 chr1 54666197 . A . PASS END=54666201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr1 54666202 . C . PASS END=54666204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 54666205 . C . PASS END=54666205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 54666206 . C . PASS END=54666206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54666207 . G . PASS END=54666207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 54666208 . C . PASS END=54666208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 54666209 . T . PASS END=54666221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,71,255:26,0 chr1 54666222 . G . PASS END=54666222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 54666223 . G . PASS END=54666228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 54666229 . T . PASS END=54666229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 54666230 . A . PASS END=54666230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 54666231 . T . PASS END=54666243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,649:0,41,255:19,0 chr1 54666244 . C . PASS END=54666244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 54666245 . G . PASS END=54666262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 54670691 . G . PASS END=54670692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 54670693 . G . PASS END=54670693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 54670694 . T . PASS END=54670702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,861:0,69,255:26,0 chr1 54670703 . C . PASS END=54670705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 54670706 . T . PASS END=54670706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 54670707 . C . PASS END=54670708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 54670709 . G . PASS END=54670709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 54670710 . G . PASS END=54670719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1072:0,80,255:32,0 chr1 54670720 . A . PASS END=54670720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1021:0,79,255:31,0 chr1 54670721 . C . PASS END=54670722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 54670723 . A . PASS END=54670723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:31,0 chr1 54670724 . A . PASS END=54670745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1140:0,83,255:34,0 chr1 54670746 . G . PASS END=54670746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 54670747 . A . PASS END=54670810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:37,0 chr1 54670811 . A . PASS END=54670811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 54670812 . T . PASS END=54670816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 54670817 . T . PASS END=54670829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,945:0,66,255:22,0 chr1 54670830 . T . PASS END=54670837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 54670838 . A . PASS END=54670838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:16,0 chr1 54670839 . G . PASS END=54670863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 54670864 . G . PASS END=54670865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 54670866 . G . PASS END=54670874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 54670968 . C . PASS END=54670976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 54670977 . C . PASS END=54670977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr1 54670978 . G . PASS END=54670985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:32,0 chr1 54670986 . C . PASS END=54670986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1296:0,92,255:34,0 chr1 54670987 . C . PASS END=54670987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:34,0 chr1 54670988 . T . PASS END=54671014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:41:0,90,1316:0,90,255:40,0 chr1 54671015 . T . PASS END=54671015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1573:0,77,255:40,0 chr1 54671016 . C . PASS END=54671083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:91:39:0,91,1404:0,91,255:40,0 chr1 54675619 . A . PASS END=54675621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 54675622 . C . PASS END=54675623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 54675624 . C . PASS END=54675624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 54675625 . T . PASS END=54675630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 54675631 . T . PASS END=54675631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 54675632 . T . PASS END=54675643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,801:0,66,255:26,0 chr1 54675644 . T . PASS END=54675804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,978:0,81,255:40,0 chr1 54678174 . G . PASS END=54678175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:35,0 chr1 54678176 . T . PASS END=54678176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 54678177 . T . PASS END=54678316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:34:0,84,1260:0,96,255:40,0 chr1 54678317 . C . PASS END=54678317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 54678318 . G . PASS END=54678321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 54678322 . C . PASS END=54678331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,77,255:25,0 chr1 54681814 . A . PASS END=54681825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,930:0,72,255:24,0 chr1 54681826 . G . PASS END=54681826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 54681827 . T . PASS END=54681831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 54681832 . G . PASS END=54681835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 54681836 . A . PASS END=54681836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 54681837 . G . PASS END=54681882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:33:0,89,1205:0,89,255:40,0 chr1 54681883 . T . PASS END=54681919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,117,1755:0,131,255:40,0 chr1 54681920 . G C, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.489;ReadPosRankSum=2.525;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,29,0:0.644,0.000:45:8,14,0:8,15,0:44:85,0,43,1028,572,1600:255,0,255:14,0:5.0000e+01,1.6179e-04,4.5650e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,13,16:8,8,14,15 chr1 54681921 . T . PASS END=54681936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,109,1438:0,109,255:40,0 chr1 54681937 . A . PASS END=54681937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1216:0,62,255:39,0 chr1 54681938 . A . PASS END=54681957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,110,1482:0,110,255:40,0 chr1 54681958 . G . PASS END=54682005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,86,255:39,0 chr1 54682006 . A . PASS END=54682006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 54682007 . G . PASS END=54682010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 54682011 . G . PASS END=54682017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 54683845 . G . PASS END=54683855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,128,255:40,0 chr1 54683856 . C G, 45.59 PASS DP=49;MQ=250.00;MQRankSum=5.838;ReadPosRankSum=4.689;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,19,0:0.388,0.000:49:13,6,0:17,13,0:45:80,0,50,664,1060,1724:255,0,255:30,0:4.5587e+01,1.4186e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,9,10:13,17,10,9 chr1 54683857 . C . PASS END=54683922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:37:0,93,1395:0,111,255:40,0 chr1 54686284 . A . PASS END=54686284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 54686285 . C . PASS END=54686286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 54686287 . G . PASS END=54686287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 54686288 . G . PASS END=54686294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 54686295 . C . PASS END=54686295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 54686296 . T . PASS END=54686304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 54686305 . T . PASS END=54686305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 54686306 . C . PASS END=54686308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 54686309 . A . PASS END=54686309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 54686310 . A . PASS END=54686311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 54686312 . T . PASS END=54686312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 54686313 . G . PASS END=54686320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 54686321 . G . PASS END=54686336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr1 54686337 . C . PASS END=54686352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr1 54686353 . G . PASS END=54686362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 54686363 . T . PASS END=54686368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 54686369 . G . PASS END=54686369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 54686370 . G . PASS END=54686373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 54686374 . T C, 48.66 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=2.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:4,6,0:11,5,0:47:83,0,50,385,537,922:255,0,255:15,0:4.8657e+01,8.1024e-05,5.3000e+01,3.8538e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,1,10:8,7,4,7 chr1 54686375 . T . PASS END=54686393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 54686394 . C . PASS END=54686411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,54,255:19,0 chr1 54686412 . C . PASS END=54686426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 54686427 . G . PASS END=54686444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:17,0 chr1 54686445 . C . PASS END=54686463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 54686464 . C T, 43.18 PASS DP=12;MQ=250.00;MQRankSum=2.404;ReadPosRankSum=2.404;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,3,0:0.250,0.000:12:2,1,0:7,2,0:43:78,0,50,107,321,429:80,0,255:5,0:4.3183e+01,2.3039e-04,5.3000e+01,1.0733e+02,3.5603e+02,4.3163e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,1,2:8,1,1,2 chr1 54686465 . G . PASS END=54686482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:8,0 chr1 54686483 . G . LowGQ END=54686483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:7,0 chr1 54686484 . C . PASS END=54686486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 54686487 . A . PASS END=54686491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 54686492 . C . PASS END=54686501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:6:4:0,6,90:0,12,155:3,0 chr1 54686502 . A . PASS END=54686529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 54690798 . A . PASS END=54690829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1178:0,83,255:40,0 chr1 54690830 . T . PASS END=54690866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,112,1800:0,112,255:40,0 chr1 54690867 . G A, 30.12 PASS DP=55;MQ=249.86;MQRankSum=5.660;ReadPosRankSum=3.732;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,15,0:0.273,0.000:55:23,8,0:17,7,0:30:65,0,50,450,1399,1849:255,0,255:35,0:3.0121e+01,4.2471e-03,5.3004e+01,4.4853e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,20,8,7:15,25,7,8 chr1 54690868 . G . PASS END=54690904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,140,255:40,0 chr1 54690905 . C . PASS END=54691055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1260:0,86,255:40,0 chr1 54692780 . C . PASS END=54692780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 54692781 . T . PASS END=54692782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 54692783 . A . PASS END=54692783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,958:0,56,255:27,0 chr1 54692784 . G . PASS END=54692784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 54692785 . C . PASS END=54692788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 54692789 . T . PASS END=54692789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:27,0 chr1 54692790 . C . PASS END=54692791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 54692792 . G . PASS END=54692794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 54692795 . A . PASS END=54692795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,774:0,21,255:20,0 chr1 54692796 . A . PASS END=54692796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,909:0,40,255:22,0 chr1 54692797 . G . PASS END=54692801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:29:0,63,945:0,73,255:24,0 chr1 54692802 . G . PASS END=54692803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,943:0,54,255:20,0 chr1 54692804 . T . PASS END=54692804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,869:0,15,255:18,0 chr1 54692805 . C . PASS END=54692805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,892:0,29,255:19,0 chr1 54692806 . A . LowGQ END=54692808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,737:0,0,255:19,0 chr1 54692809 . C . PASS END=54692809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:19,0 chr1 54692810 . A . LowGQ END=54692810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:0:26:0,0,694:30,0,255:17,0 chr1 54692811 . C . PASS END=54692811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,818:0,28,255:18,0 chr1 54692812 . T . LowGQ END=54692812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,537:20,0,255:18,0 chr1 54692813 . C . PASS END=54692813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,615:0,13,255:19,0 chr1 54692814 . A . PASS END=54692816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,617:0,35,255:19,0 chr1 54692817 . G . LowGQ END=54692818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,592:19,0,255:18,0 chr1 54692819 . C . PASS END=54692819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,687:0,30,255:18,0 chr1 54692820 . A . LowGQ END=54692833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:21:0,0,243:3,0,255:18,0 chr1 54693928 . A . PASS END=54693942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:35:0,80,1303:0,80,255:36,1 chr1 54693943 . G . PASS END=54693943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:37,0 chr1 54693944 . G . PASS END=54694012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:38:0,82,1429:0,82,255:40,0 chr1 54694013 . A . PASS END=54694013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1474:0,77,255:39,0 chr1 54694014 . T . PASS END=54694029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1337:0,84,255:40,0 chr1 54694122 . T . PASS END=54694129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,120,1800:0,126,255:40,0 chr1 54694130 . G . PASS END=54694150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,102,1651:0,102,255:40,0 chr1 54694421 . C . PASS END=54694448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 54694449 . C . PASS END=54694454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 54694455 . A . PASS END=54694455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:13,0 chr1 54694456 . C . PASS END=54694462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 54694463 . C . PASS END=54694463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 54694464 . G . PASS END=54694488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 54694489 . C . PASS END=54694499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 54704802 . G . PASS END=54704872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1055:0,84,255:37,0 chr1 54706578 . C . PASS END=54706584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:24,0 chr1 54706585 . A . PASS END=54706585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 54706586 . C . PASS END=54706593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,893:0,72,255:25,0 chr1 54706594 . A . PASS END=54706594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 54706595 . A . PASS END=54706632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,856:0,72,255:25,0 chr1 54707147 . C . PASS END=54707182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,140,255:40,0 chr1 54707837 . T . PASS END=54707837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 54707838 . G . PASS END=54707858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:15,0 chr1 54707859 . G . PASS END=54707866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 54707867 . T . PASS END=54707885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 54708908 . A . PASS END=54708915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:82:46:0,82,1420:0,82,255:40,0 chr1 54708916 . C . LowGQ END=54708916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:0:55:0,0,1462:10,0,255:40,0 chr1 54708917 . C . PASS END=54708918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,132,255:40,0 chr1 54708919 . G . PASS END=54708919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:74:57:0,74,1679:0,74,255:40,0 chr1 54708920 . G . PASS END=54708924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,107,1781:0,107,255:40,0 chr1 54708925 . G . PASS END=54708925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,6:57:72:57:0,72,1733:0,72,255:40,0 chr1 54708926 . G . PASS END=54708938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:96:57:0,96,1800:0,96,255:40,0 chr1 54708939 . A . PASS END=54708939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:58:60:0,58,1778:0,58,255:40,0 chr1 54708940 . G . PASS END=54708972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:83:46:0,83,1611:0,83,255:40,0 chr1 54717289 . C . PASS END=54717342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 54717343 . T . PASS END=54717350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 54717351 . C . PASS END=54717365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,668:0,43,255:19,0 chr1 54717467 . C . PASS END=54717479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr1 54717480 . G . PASS END=54717480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 54717481 . G . PASS END=54717520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 54717521 . C . PASS END=54717533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 54722800 . C . PASS END=54722859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,104,1405:0,104,255:40,0 chr1 54723742 . C . PASS END=54723742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 54723743 . T . PASS END=54723743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 54723744 . G . PASS END=54723746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 54723747 . T . PASS END=54723747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:28,0 chr1 54723748 . G . PASS END=54723802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1064:0,80,255:33,0 chr1 54723803 . G . PASS END=54723803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 54723804 . G . PASS END=54723813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1143:0,80,255:32,0 chr1 54723814 . C . PASS END=54723814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 54723815 . G . PASS END=54723822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:31,0 chr1 54747111 . C . PASS END=54747112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 54747113 . G . PASS END=54747113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 54747114 . A . PASS END=54747118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 54747119 . A . PASS END=54747119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 54747120 . A . PASS END=54747123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 54747124 . G . PASS END=54747124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 54747125 . G . PASS END=54747139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 54747140 . C . PASS END=54747147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 54747148 . C . PASS END=54747148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 54747149 . C . PASS END=54747150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 54747151 . T . PASS END=54747153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 54747154 . T . PASS END=54747159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 54747160 . G . PASS END=54747188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,366:0,33,255:12,0 chr1 54747189 . A . PASS END=54747193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 54747194 . C . PASS END=54747198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 54747199 . C . PASS END=54747200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 54867534 . A . PASS END=54867538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr1 54867539 . C . PASS END=54867613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1033:0,80,255:37,0 chr1 54867614 . A . PASS END=54867614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:26,0 chr1 54867615 . T . PASS END=54867616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 54867617 . C . PASS END=54867618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 54870249 . C . PASS END=54870310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:82:0,120,1800:0,214,255:40,0 chr1 54870531 . C . PASS END=54870534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:31,0 chr1 54870535 . G . PASS END=54870535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 54870536 . A . PASS END=54870540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1158:0,83,255:33,0 chr1 54870541 . A . PASS END=54870541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1048:0,44,255:31,0 chr1 54870542 . A . PASS END=54870547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1121:0,85,255:33,0 chr1 54870548 . G . PASS END=54870553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1280:0,92,255:34,0 chr1 54870554 . A . PASS END=54870554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:33,0 chr1 54870555 . T . PASS END=54870603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1200:0,83,255:34,0 chr1 54871626 . T . PASS END=54871626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 54871627 . T . PASS END=54871629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 54871630 . C . PASS END=54871630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 54871631 . C . PASS END=54871631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 54871632 . C . PASS END=54871632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 54871633 . G . PASS END=54871638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 54871639 . G . PASS END=54871650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 54871651 . G . PASS END=54871651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 54871652 . C . PASS END=54871655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 54871656 . G . PASS END=54871656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 54871657 . C . PASS END=54871663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 54871664 . T G, 0.05 DRAGENSnpHardQUAL DP=8;MQ=200.82;MQRankSum=0.747;ReadPosRankSum=-0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:2,1,0:5,0,0:20:15,0,50,36,207,249:15,0,209:7,0:4.7329e-02,1.9651e+01,7.2651e+01,5.5427e+01,2.6099e+02,2.7196e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,0,1:5,2,0,1 chr1 54871665 . T . PASS END=54871681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,235:8,0 chr1 55013983 . A . PASS END=55013991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 55013992 . A . PASS END=55013992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 55013993 . A . PASS END=55014012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,582:0,48,255:16,0 chr1 55014013 . C . PASS END=55014015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:11,0 chr1 55050328 . G . PASS END=55050341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:26,0 chr1 55050342 . G . PASS END=55050343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 55050344 . T . PASS END=55050344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 55050345 . C . PASS END=55050516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:27:0,80,1008:0,80,255:39,0 chr1 55050517 . A . PASS END=55050535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr1 55051508 . C . PASS END=55051514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,992:0,68,255:26,0 chr1 55051515 . G . PASS END=55051518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 55051519 . G . PASS END=55051519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55051520 . C . PASS END=55051523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55051524 . C . PASS END=55051531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 55051532 . G . PASS END=55051549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:29,0 chr1 55051550 . A . PASS END=55051577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:27,0 chr1 55058219 . T . PASS END=55058227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:30,0 chr1 55058228 . A . PASS END=55058228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 55058229 . G . PASS END=55058279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1111:0,88,255:34,0 chr1 55059614 . G . PASS END=55059614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 55059615 . T . PASS END=55059615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 55059616 . G . PASS END=55059617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 55059618 . G . PASS END=55059618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 55059619 . C . PASS END=55059619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 55059620 . A . PASS END=55059620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 55059621 . T . PASS END=55059621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 55059622 . C . PASS END=55059630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 55059631 . C . PASS END=55059631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 55059632 . T . PASS END=55059632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 55059633 . C . PASS END=55059652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:24,0 chr1 55059653 . A . PASS END=55059653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr1 55059654 . A . PASS END=55059676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 55059677 . T . PASS END=55059677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,680:0,33,255:19,0 chr1 55059678 . T . PASS END=55059687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 55059688 . C . PASS END=55059688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 55059689 . G . PASS END=55059701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:21,0 chr1 55059702 . A . PASS END=55059702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,690:0,32,255:19,0 chr1 55059703 . G . PASS END=55059703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55059704 . A . PASS END=55059704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,647:0,32,255:19,0 chr1 55059705 . T . PASS END=55059705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55059706 . C . PASS END=55059707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,774:0,50,255:19,0 chr1 55059708 . C . PASS END=55059710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 55059711 . A . PASS END=55059712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55060229 . G . PASS END=55060237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr1 55060238 . A . PASS END=55060241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 55060242 . A . PASS END=55060242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:25,0 chr1 55060243 . G . PASS END=55060246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 55060247 . A . PASS END=55060247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 55060248 . C . PASS END=55060255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1111:0,87,255:30,0 chr1 55060256 . A . PASS END=55060256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 55060257 . C . PASS END=55060257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 55060258 . A . PASS END=55060258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 55060259 . G . PASS END=55060261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 55060262 . G . PASS END=55060266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr1 55060267 . G . PASS END=55060267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55060268 . A . PASS END=55060272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1023:0,74,255:26,0 chr1 55060273 . G . PASS END=55060290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 55060291 . T . PASS END=55060316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,864:0,61,255:26,0 chr1 55060317 . A . PASS END=55060317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 55060318 . T . PASS END=55060327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,831:0,69,255:23,0 chr1 55060328 . A . PASS END=55060354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,43,255:19,0 chr1 55060355 . A . PASS END=55060364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,495:0,31,255:13,0 chr1 55062932 . A . PASS END=55062938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 55062939 . G . PASS END=55062959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,856:0,63,255:24,0 chr1 55062960 . G . PASS END=55062961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 55062962 . T . PASS END=55062967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 55062968 . C . PASS END=55062968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 55062969 . T . PASS END=55062972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 55062973 . A . PASS END=55062973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 55062974 . A . PASS END=55062976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,903:0,75,255:26,0 chr1 55062977 . C . PASS END=55062980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 55062981 . T . PASS END=55062981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 55062982 . G . PASS END=55062983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55062984 . G . PASS END=55062984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 55062985 . G . PASS END=55062986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55062987 . G . PASS END=55062988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55062989 . G . PASS END=55062995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 55062996 . G . PASS END=55062996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 55062997 . C . PASS END=55062997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55062998 . T . PASS END=55062998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 55062999 . G . PASS END=55063003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 55063004 . T . PASS END=55063015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 55063016 . C . PASS END=55063019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 55063020 . T . PASS END=55063020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 55063021 . C . PASS END=55063022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55063023 . C . PASS END=55063024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55063025 . A . PASS END=55063025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:25,0 chr1 55063026 . G . PASS END=55063029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55063030 . A . PASS END=55063030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:25,0 chr1 55063031 . A . PASS END=55063045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,64,255:26,0 chr1 55063046 . A . PASS END=55063059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,50,255:17,0 chr1 55063060 . A . PASS END=55063060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 55063061 . T . PASS END=55063063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 55063064 . A . PASS END=55063069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:15:0,31,507:0,31,255:13,0 chr1 55063070 . T . PASS END=55063074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 55063075 . A . PASS END=55063084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 55063085 . C . PASS END=55063088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 55064969 . C . PASS END=55064976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,692:0,54,255:19,0 chr1 55064977 . G . PASS END=55064986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:23,0 chr1 55064987 . C . PASS END=55064993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 55064994 . C . PASS END=55064994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 55064995 . T . PASS END=55064996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr1 55064997 . A . PASS END=55064997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 55064998 . A . PASS END=55065032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1019:0,84,255:33,0 chr1 55065033 . C . PASS END=55065033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:32,0 chr1 55065034 . A . PASS END=55065073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1025:0,84,255:33,0 chr1 55065074 . T . PASS END=55065088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,938:0,67,255:26,0 chr1 55066942 . C . PASS END=55066955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 55066956 . T . PASS END=55067006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:19,0 chr1 55067007 . A . PASS END=55067023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,786:0,65,255:22,0 chr1 55067024 . T . PASS END=55067024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 55067025 . T . PASS END=55067029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 55067030 . G . PASS END=55067064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,714:0,54,255:19,0 chr1 55067065 . C . PASS END=55067065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:15,0 chr1 55067066 . T . PASS END=55067085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:16,0 chr1 55067086 . C . PASS END=55067086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 55068342 . G . PASS END=55068397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1321:0,87,255:40,0 chr1 55069544 . G . PASS END=55069595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,559:0,41,255:19,0 chr1 55069596 . G . PASS END=55069606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,41,255:13,0 chr1 55069607 . C . PASS END=55069610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 55070019 . G . PASS END=55070023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:40,0 chr1 55070024 . C . PASS END=55070024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 55070025 . C . PASS END=55070025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1474:0,74,255:40,0 chr1 55070026 . T . PASS END=55070102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:87:36:0,87,1305:0,108,255:40,0 chr1 55070749 . G . PASS END=55070799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:30:0,86,1125:0,86,255:40,0 chr1 55070800 . A . PASS END=55070800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1371:0,73,255:37,0 chr1 55070801 . T . PASS END=55070882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,102,1530:0,110,255:40,0 chr1 55072807 . G . PASS END=55072847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:35,0 chr1 55072848 . T . PASS END=55072848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:32,0 chr1 55072849 . C . PASS END=55072876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1255:0,86,255:34,0 chr1 55072877 . G . PASS END=55072877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 55072878 . G . PASS END=55072880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 55072881 . A . PASS END=55072881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:28,0 chr1 55072882 . C . PASS END=55072901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr1 55072902 . T . PASS END=55072933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 55072934 . A . PASS END=55072934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:19,0 chr1 55072935 . A . PASS END=55072936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 55072937 . G . PASS END=55072938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 55073615 . G . PASS END=55073617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 55073618 . C . PASS END=55073653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,764:0,63,255:24,0 chr1 55073654 . C . PASS END=55073655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 55073656 . C . PASS END=55073658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 55073659 . A . PASS END=55073659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 55073660 . C . PASS END=55073694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:25,0 chr1 55073695 . T . PASS END=55073734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:18,0 chr1 55073735 . G . PASS END=55073735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 55073736 . A . PASS END=55073736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 55073737 . C . PASS END=55073741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55074630 . G . PASS END=55074631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 55074632 . A . PASS END=55074635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,436:0,42,255:15,0 chr1 55074636 . T . PASS END=55074636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:13,0 chr1 55074637 . A . PASS END=55074640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,645:0,51,255:18,0 chr1 55074641 . C . PASS END=55074641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 55074642 . A . PASS END=55074651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,615:0,44,255:19,0 chr1 55074652 . C . PASS END=55074655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 55074656 . A . PASS END=55074656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 55074657 . G . PASS END=55074657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 55074658 . G . PASS END=55074658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,667:0,16,255:19,0 chr1 55074659 . T . PASS END=55074664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:23,0 chr1 55074665 . C . PASS END=55074665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:23,0 chr1 55074666 . A . PASS END=55074668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 55074669 . T . PASS END=55074669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 55074670 . A . PASS END=55074672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 55074673 . T . PASS END=55074673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:24,0 chr1 55074674 . G . PASS END=55074674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 55074675 . A . PASS END=55074675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 55074676 . C . PASS END=55074676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:25,0 chr1 55074677 . C . PASS END=55074677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr1 55074678 . A . PASS END=55074678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 55074679 . C . PASS END=55074679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:25,0 chr1 55074680 . C . PASS END=55074703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 55074704 . G . PASS END=55074704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 55074705 . T . PASS END=55074713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 55074714 . A . PASS END=55074715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,837:0,56,255:22,0 chr1 55074716 . C . PASS END=55074716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 55074717 . T . PASS END=55074721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 55074722 . G . PASS END=55074724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 55074725 . T . PASS END=55074725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 55074726 . T . PASS END=55074732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 55074733 . A . PASS END=55074733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 55074734 . G . PASS END=55074746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 55074747 . A . PASS END=55074747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 55074748 . A . PASS END=55074754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 55074755 . T . PASS END=55074755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 55074756 . G . PASS END=55074756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 55074757 . A . PASS END=55074757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 55074758 . T . PASS END=55074773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 55074774 . C . PASS END=55074785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr1 55074941 . T . PASS END=55074943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 55074944 . G . PASS END=55074944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1169:0,47,255:30,0 chr1 55074945 . T . PASS END=55075026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1196:0,85,255:38,0 chr1 55075027 . C . PASS END=55075030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr1 55075031 . C . PASS END=55075038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 55075039 . C . PASS END=55075056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,922:0,62,255:25,0 chr1 55075057 . A . PASS END=55075057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 55075058 . G . PASS END=55075078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 55075079 . C . PASS END=55075079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 55075080 . T . PASS END=55075082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 55075083 . A . PASS END=55075083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 55075084 . C . PASS END=55075089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,953:0,62,255:23,0 chr1 55075090 . C . PASS END=55075090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 55075091 . G . PASS END=55075092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 55075093 . T . PASS END=55075177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,660:0,41,255:19,0 chr1 55075178 . A . PASS END=55075180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 55075181 . T . PASS END=55075181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 55075182 . T . PASS END=55075190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 55075191 . C . PASS END=55075200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55075201 . A . PASS END=55075217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:25,0 chr1 55075218 . A . PASS END=55075218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr1 55075219 . G . PASS END=55075260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 55075261 . A . PASS END=55075261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 55075262 . G . PASS END=55075262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 55075263 . C . PASS END=55075263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 55075264 . C . PASS END=55075276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 55075277 . C . PASS END=55075279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 55075280 . G . PASS END=55075280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:18,0 chr1 55075281 . T . PASS END=55075282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55075283 . G . PASS END=55075287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55075288 . A . PASS END=55075289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55075290 . A . PASS END=55075296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55075297 . C . PASS END=55075301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 55075302 . G . PASS END=55075303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 55075304 . T . PASS END=55075312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,828:0,53,255:20,0 chr1 55075313 . C . PASS END=55075345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,677:0,60,255:22,0 chr1 55075346 . A . PASS END=55075346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr1 55075347 . C . PASS END=55075347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 55075348 . T . PASS END=55075348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 55075349 . C . PASS END=55075352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 55075353 . T . PASS END=55075353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 55075354 . G . PASS END=55075358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 55075359 . A . PASS END=55075359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 55075360 . T . PASS END=55075369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 55075370 . A . PASS END=55075379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 55075380 . G . PASS END=55075398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,846:0,61,255:26,0 chr1 55075399 . G . PASS END=55075414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1125:0,90,255:30,0 chr1 55075415 . C . PASS END=55075451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1127:0,81,255:38,0 chr1 55075452 . G A, 165.08 PASS DP=40;MQ=244.43;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,23,0:0,17,0:115:203,118,0,303,303,303:255,120,0:0,0:1.6508e+02,1.1508e+02,0.0000e+00,2.9985e+02,3.3462e+02,3.0286e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,29,11:0,0,20,20 chr1 55075453 . C . PASS END=55075489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:38:0,97,1154:0,97,255:40,0 chr1 55075490 . G . PASS END=55075614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:96:43:0,96,1525:0,96,255:40,0 chr1 55076085 . C . PASS END=55076225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:36:0,82,1260:0,82,255:40,0 chr1 55076226 . T . PASS END=55076228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 55077279 . A . PASS END=55077401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:34:0,87,1250:0,92,255:40,0 chr1 55077402 . A . PASS END=55077418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:28:0,60,900:0,84,255:25,0 chr1 55078159 . C . PASS END=55078167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1009:0,81,255:28,0 chr1 55078168 . T . PASS END=55078168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55078169 . G . PASS END=55078190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1133:0,84,255:30,0 chr1 55078191 . G . PASS END=55078191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:30,0 chr1 55078192 . G . PASS END=55078228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1188:0,89,255:34,0 chr1 55078229 . A . PASS END=55078229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 55078230 . G . PASS END=55078343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1135:0,85,255:40,0 chr1 55078344 . G . PASS END=55078344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 55078345 . G . PASS END=55078346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 55078347 . A . PASS END=55078375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,65,255:25,0 chr1 55078376 . C . PASS END=55078383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 55080373 . T . PASS END=55080373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 55080374 . G . PASS END=55080532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:92:31:0,92,1157:0,92,255:40,0 chr1 55081693 . C . PASS END=55081700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55081701 . G . PASS END=55081712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,527:0,42,255:19,0 chr1 55081713 . A . PASS END=55081715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 55081716 . G . PASS END=55081716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 55081717 . C . PASS END=55081744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 55081745 . A . PASS END=55081745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 55081746 . C . PASS END=55081755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:24,0 chr1 55081756 . T . PASS END=55081757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 55081758 . G . PASS END=55081809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,754:0,63,255:26,0 chr1 55081810 . C . PASS END=55081832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 55081833 . A . PASS END=55081837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,38,255:14,0 chr1 55081838 . G . PASS END=55081838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 55081839 . A . PASS END=55081841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 55081842 . T . PASS END=55081842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:11,0 chr1 55081843 . T . PASS END=55081845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:11,0 chr1 55085537 . T . PASS END=55085638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:29:0,87,1102:0,87,255:40,0 chr1 55085639 . C . PASS END=55085654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1215:0,87,255:35,0 chr1 55085655 . A . PASS END=55085675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:35:0,60,900:0,105,255:26,0 chr1 55085676 . A . PASS END=55085680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:51:36:0,51,765:0,92,255:19,0 chr1 55088951 . C . PASS END=55089068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:34:0,80,1440:0,80,255:40,0 chr1 55096407 . T . PASS END=55096559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:67:0,120,1800:0,173,255:40,0 chr1 55100361 . G . PASS END=55100365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,171,255:40,0 chr1 55100366 . A . PASS END=55100402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,131,255:40,0 chr1 55118600 . A . PASS END=55118603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:16,0 chr1 55118604 . C . PASS END=55118636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,601:0,51,255:19,0 chr1 55118637 . A . PASS END=55118637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:18,0 chr1 55118638 . A . PASS END=55118661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 55118662 . C . PASS END=55118664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55118665 . C . PASS END=55118687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr1 55118688 . G . PASS END=55118688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:15,0 chr1 55118689 . G . PASS END=55118707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:18,0 chr1 55118708 . C . PASS END=55118708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 55118709 . C . PASS END=55118709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 55118710 . C . PASS END=55118710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 55118711 . C . PASS END=55118720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,639:0,44,255:19,0 chr1 55118721 . T . PASS END=55118722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55118723 . G . PASS END=55118723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 55118724 . C . PASS END=55118730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,664:0,60,255:21,0 chr1 55118731 . G . PASS END=55118738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 55118739 . T . PASS END=55118742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 55118743 . T . PASS END=55118748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 55118749 . C . PASS END=55118749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55118750 . C . PASS END=55118750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 55118751 . C . PASS END=55118751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55118752 . A . PASS END=55118752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 55118753 . A . PASS END=55118766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 55118767 . T . PASS END=55118777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr1 55118778 . A . PASS END=55118778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,585:0,29,255:19,0 chr1 55118779 . T . PASS END=55118781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55118782 . T . PASS END=55118793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 55118794 . G . PASS END=55118800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr1 55118801 . G . PASS END=55118816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:22,0 chr1 55118817 . C . PASS END=55118818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 55118819 . G . PASS END=55118825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 55118826 . T . PASS END=55118826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 55118827 . G . PASS END=55118829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 55118830 . T . PASS END=55118830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 55118831 . G . PASS END=55118836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55118837 . A . PASS END=55118837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 55118838 . C . PASS END=55118846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 55118847 . C . PASS END=55118847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 55118848 . T . PASS END=55118863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,890:0,62,255:24,0 chr1 55118864 . A . PASS END=55118864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 55118865 . T . PASS END=55118868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 55118869 . T . PASS END=55118869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 55118870 . C . PASS END=55118874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 55118875 . C . PASS END=55118893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,629:0,40,255:19,0 chr1 55118894 . T . PASS END=55118894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,559:0,10,255:16,0 chr1 55118895 . C . PASS END=55118896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 55118897 . T . PASS END=55118897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 55118898 . G . PASS END=55118898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 55118899 . T . PASS END=55118899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 55118900 . T . PASS END=55118907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 55118908 . A . PASS END=55118908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 55118909 . G . PASS END=55118922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 55118923 . T . PASS END=55118930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 55118931 . A . PASS END=55118931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 55118932 . T . PASS END=55118944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,792:0,63,255:26,0 chr1 55118945 . G . PASS END=55119251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1215:0,86,255:40,0 chr1 55119252 . T . PASS END=55119288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,111,1665:0,120,255:40,0 chr1 55119289 . G C, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=2.990;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,26,0:0.542,0.000:48:8,13,0:14,13,0:48:85,0,49,930,758,1688:255,0,255:18,0:5.0000e+01,6.8857e-05,5.2334e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,17,9:12,10,16,10 chr1 55119290 . A . PASS END=55119326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,128,255:40,0 chr1 55119327 . A . PASS END=55119477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,118,1800:0,118,255:40,0 chr1 55119478 . T . PASS END=55119514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,117,1755:0,126,255:40,0 chr1 55119515 . T G, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.669;ReadPosRankSum=2.030;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,22,0:0.500,0.000:44:9,9,0:13,13,0:48:85,0,50,787,787,1574:255,0,255:21,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,17,11,11:14,8,14,8 chr1 55119516 . A . PASS END=55119533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,114,1612:0,116,255:40,0 chr1 55119534 . C T, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.863;ReadPosRankSum=0.607;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,24,0:0.511,0.000:47:11,9,0:12,15,0:48:85,0,50,858,794,1652:255,0,255:19,0:5.0000e+01,6.5492e-05,5.2946e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,10,14:12,11,11,13 chr1 55119535 . C . PASS END=55119545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr1 55119546 . A G, 181.51 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,18,0:0,27,0:132:219,135,0,1670,135,1670:255,135,0:0,0:1.8151e+02,1.3151e+02,0.0000e+00,4.5000e+02,1.6628e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,25:0,0,21,24 chr1 55119547 . G . PASS END=55119584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:41:0,96,1369:0,96,255:40,0 chr1 55119585 . T . PASS END=55119627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1355:0,95,255:37,0 chr1 55119628 . C . PASS END=55119628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:33,0 chr1 55119629 . C . PASS END=55119640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1327:0,95,255:36,0 chr1 55119641 . A . PASS END=55119641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:34,0 chr1 55119642 . C . PASS END=55119656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:38:0,83,1145:0,83,255:38,0 chr1 55119657 . T . PASS END=55119659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:36,0 chr1 55119660 . G . PASS END=55119660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1418:0,98,255:36,0 chr1 55119661 . C . PASS END=55119661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:36,0 chr1 55119662 . A . PASS END=55119665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:37,0 chr1 55119666 . A . PASS END=55119666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:31,0 chr1 55119667 . G . PASS END=55119726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1271:0,89,255:34,0 chr1 55119727 . T . PASS END=55119727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:28,0 chr1 55119728 . T . PASS END=55119728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 55119729 . G . PASS END=55119729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:28,0 chr1 55119730 . G . PASS END=55119778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1149:0,93,255:32,0 chr1 55119779 . A . PASS END=55119798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 55119799 . G . PASS END=55119830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,576:0,40,255:19,0 chr1 55130840 . G . PASS END=55130908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,168,255:40,0 chr1 55130909 . C . PASS END=55130913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,196,255:40,0 chr1 55134527 . G . PASS END=55134536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1116:0,91,255:36,0 chr1 55134537 . T . PASS END=55134537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:35,0 chr1 55134538 . C . PASS END=55134610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:35:0,80,1154:0,80,255:37,0 chr1 55136170 . A . PASS END=55136249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1153:0,86,255:38,0 chr1 55136473 . C . PASS END=55136480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,922:0,72,255:25,0 chr1 55136481 . A . PASS END=55136486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 55136487 . C . PASS END=55136487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:31,0 chr1 55136488 . C . PASS END=55136491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1166:0,86,255:33,0 chr1 55136492 . G . PASS END=55136493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 55136494 . C . PASS END=55136494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:31,0 chr1 55136495 . A . PASS END=55136528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1159:0,86,255:35,0 chr1 55136529 . T C, 49.17 PASS DP=39;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=0.998;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,17,0:0.447,0.000:38:12,9,0:9,8,0:48:84,0,50,608,692,1300:255,0,255:18,0:4.9173e+01,7.4293e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,6,5,12:14,7,11,6 chr1 55136530 . G . PASS END=55136566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1133:0,80,255:34,0 chr1 55136567 . C . PASS END=55136573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:31,0 chr1 55136574 . A . PASS END=55136574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 55136575 . G . PASS END=55136579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 55136580 . A . PASS END=55136580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 55136581 . G . PASS END=55136584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 55136585 . A . PASS END=55136585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,991:0,54,255:30,0 chr1 55136586 . A . PASS END=55136593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1117:0,93,255:31,0 chr1 55136594 . A . PASS END=55136594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 55136595 . C . PASS END=55136595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 55136596 . C . PASS END=55136596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 55136597 . A . PASS END=55136599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 55136600 . C . PASS END=55136600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 55136601 . A . PASS END=55136602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,991:0,90,255:30,0 chr1 55138764 . G . PASS END=55138766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr1 55138767 . C . PASS END=55138789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:25,0 chr1 55138790 . C . PASS END=55138836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1024:0,81,255:33,0 chr1 55138837 . C . PASS END=55138837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 55138838 . T . PASS END=55138841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 55138842 . C . PASS END=55138859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 55139374 . G . PASS END=55139478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1205:0,81,255:40,0 chr1 55139674 . T . PASS END=55139703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1007:0,86,255:39,0 chr1 55139704 . C . PASS END=55139740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,101,1410:0,101,255:40,0 chr1 55139741 . A G, 190.53 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,24,0:0,24,0:141:228,144,0,328,328,328:255,144,0:0,0:1.9053e+02,1.4053e+02,0.0000e+00,3.2530e+02,3.6007e+02,3.2831e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,24,24:0,0,26,22 chr1 55139742 . C . PASS END=55139778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,128,255:40,0 chr1 55139779 . C . PASS END=55139818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:90:31:0,90,1135:0,93,255:40,0 chr1 55139819 . A . PASS END=55139819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 55139820 . A . PASS END=55139820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1025:0,54,255:30,0 chr1 55139821 . A . PASS END=55139824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 55144415 . G . PASS END=55144527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,128,255:40,0 chr1 55144936 . G . PASS END=55144947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:12,0 chr1 55144948 . T . PASS END=55144948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 55144949 . T . PASS END=55144949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 55144950 . C . PASS END=55144955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 55144956 . G . PASS END=55144956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 55144957 . C . PASS END=55144961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,545:0,45,255:16,0 chr1 55144962 . G . PASS END=55144962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 55144963 . C . PASS END=55144976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 55144977 . G . PASS END=55144977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 55144978 . C . PASS END=55145030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:17,0 chr1 55145031 . C . PASS END=55145031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 55145032 . T . PASS END=55145040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:18,0 chr1 55145041 . A . PASS END=55145041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 55145042 . T . PASS END=55145043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 55145044 . A . PASS END=55145044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 55145045 . T . PASS END=55145066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 55145067 . G . PASS END=55145067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 55145068 . C . PASS END=55145080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 55145081 . T . PASS END=55145086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 55145087 . G . PASS END=55145090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 55145091 . C . PASS END=55145096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 55145097 . C . PASS END=55145112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:10:0,24,360:0,30,255:9,0 chr1 55145564 . A . PASS END=55145583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:26,0 chr1 55145584 . C . PASS END=55145592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr1 55145593 . G . PASS END=55145593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 55145594 . C . PASS END=55145614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1080:0,90,255:31,0 chr1 55145615 . C . PASS END=55145615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr1 55145616 . C . PASS END=55145618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:30,0 chr1 55145619 . G . PASS END=55145699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1160:0,91,255:38,0 chr1 55145700 . G . PASS END=55145718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:24,0 chr1 55148329 . C . PASS END=55148332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 55148333 . G . PASS END=55148338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55148339 . G . PASS END=55148341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 55148342 . A . PASS END=55148342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 55148343 . T . PASS END=55148361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,512:0,41,255:18,0 chr1 55148362 . G . PASS END=55148416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,800:0,62,255:26,0 chr1 55148417 . A . PASS END=55148417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 55148418 . A . PASS END=55148423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr1 55148424 . A . PASS END=55148424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 55148425 . G . PASS END=55148427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 55148428 . C . PASS END=55148428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 55148429 . G . PASS END=55148429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 55148430 . T . PASS END=55148430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 55148431 . C . PASS END=55148464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 55148465 . G . PASS END=55148467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 55151931 . G . PASS END=55151944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:16,0 chr1 55151945 . G . PASS END=55151959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr1 55151960 . C . PASS END=55151960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 55151961 . G . PASS END=55151964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 55151965 . A . PASS END=55151966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,748:0,56,255:22,0 chr1 55151967 . A . PASS END=55151968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 55151969 . C . PASS END=55151969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 55151970 . T . PASS END=55151970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 55151971 . G . PASS END=55151971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 55151972 . C . PASS END=55151975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1008:0,78,255:26,0 chr1 55151976 . G . PASS END=55151977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55151978 . C . PASS END=55151978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55151979 . C . PASS END=55152089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1117:0,87,255:39,0 chr1 55152090 . G . PASS END=55152095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr1 55152096 . C . PASS END=55152096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 55152097 . A . PASS END=55152100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1039:0,71,255:26,0 chr1 55152101 . C . PASS END=55152102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55152103 . C . PASS END=55152108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr1 55152109 . T . PASS END=55152111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,994:0,45,255:21,0 chr1 55152112 . T . PASS END=55152114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:21,0 chr1 55152115 . C . PASS END=55152119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:18,0 chr1 55152120 . C . PASS END=55152121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 55158097 . C . PASS END=55158098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 55158099 . G . PASS END=55158109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 55158110 . G . PASS END=55158111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55158112 . G . PASS END=55158115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55158116 . A . PASS END=55158116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 55158117 . A . PASS END=55158193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1180:0,85,255:40,0 chr1 55158194 . C . PASS END=55158194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:30,0 chr1 55158195 . A . PASS END=55158210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:32:0,81,1215:0,94,255:31,0 chr1 55158211 . C . PASS END=55158228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,71,255:25,0 chr1 55158229 . G . PASS END=55158229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 55158230 . G . PASS END=55158234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 55161049 . G . PASS END=55161050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 55161051 . C . PASS END=55161051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 55161052 . C . PASS END=55161055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,878:0,69,255:24,0 chr1 55161056 . G . PASS END=55161127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1062:0,84,255:36,0 chr1 55161128 . A . PASS END=55161129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 55161130 . G . PASS END=55161132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 55161133 . C . PASS END=55161134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 55161135 . G . PASS END=55161139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 55161140 . A . PASS END=55161158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:25,0 chr1 55161159 . T . PASS END=55161163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 55163326 . C . PASS END=55163363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,151,255:40,0 chr1 55165742 . G . PASS END=55165750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 55165751 . T . PASS END=55165751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 55165752 . C . PASS END=55165858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1078:0,83,255:40,0 chr1 55165859 . A . PASS END=55165859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55165860 . T . PASS END=55165862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55165863 . G . PASS END=55165863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:26,0 chr1 55165864 . T . PASS END=55165866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 55165867 . G . PASS END=55165867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55165868 . T . PASS END=55165868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 55165869 . T . PASS END=55165870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 55165871 . T . PASS END=55165881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:25,0 chr1 55165994 . C . PASS END=55166084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1064:0,83,255:34,0 chr1 55166085 . A . PASS END=55166086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 55166087 . G . PASS END=55166088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 55166089 . G . PASS END=55166126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:27,0 chr1 55166127 . C . PASS END=55166134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 55166816 . A . PASS END=55166818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 55166819 . G . PASS END=55166821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 55166822 . A . PASS END=55166822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr1 55166823 . A . PASS END=55166823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr1 55166824 . G . PASS END=55166833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:32,0 chr1 55166834 . C . PASS END=55166834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:32,0 chr1 55166835 . T . PASS END=55166845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:35:0,94,1274:0,94,255:38,0 chr1 55166846 . A . PASS END=55166846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1295:0,75,255:37,0 chr1 55166847 . T . PASS END=55166950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:38:0,81,1215:0,90,255:40,0 chr1 55166951 . G . PASS END=55166979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 55166980 . G . PASS END=55166980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 55166981 . C . PASS END=55166989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 55166990 . A . PASS END=55166995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 55167763 . G . PASS END=55167771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,639:0,51,255:19,0 chr1 55167772 . G . PASS END=55167837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,726:0,62,255:26,0 chr1 55167838 . C . PASS END=55167850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:20:0,54,810:0,55,255:19,0 chr1 55167851 . A . PASS END=55167851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 55167852 . G . PASS END=55167852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55167853 . C . PASS END=55167854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 55167855 . G . PASS END=55167887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,44,255:19,0 chr1 55167888 . C . PASS END=55167889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,512:0,31,255:15,0 chr1 55167890 . T . PASS END=55167909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 55167910 . G . PASS END=55167910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr1 55167911 . T . PASS END=55167918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 55168296 . A . PASS END=55168418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,106,1399:0,106,255:40,0 chr1 55172108 . G . PASS END=55172210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:40:0,82,1443:0,82,255:40,0 chr1 55174687 . G . PASS END=55174687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 55174688 . G . PASS END=55174749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,134,255:40,0 chr1 55175619 . C . PASS END=55175628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 55175629 . C . PASS END=55175634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55175635 . A . PASS END=55175635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:19,0 chr1 55175636 . C . PASS END=55175643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 55175644 . A . PASS END=55175644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 55175645 . G . PASS END=55175645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 55175646 . A . PASS END=55175646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,697:0,47,255:20,0 chr1 55175647 . A . PASS END=55175681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,62,255:25,0 chr1 55175682 . A . PASS END=55175685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55175686 . C . PASS END=55175686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 55175687 . A . PASS END=55175688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55175689 . C . PASS END=55175691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,992:0,65,255:26,0 chr1 55175692 . G . PASS END=55175695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 55175696 . A . PASS END=55175696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 55175697 . G . PASS END=55175697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 55175698 . C . PASS END=55175698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 55175699 . T . PASS END=55175701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 55175702 . T . PASS END=55175702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 55175703 . G . PASS END=55175716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1058:0,90,255:31,0 chr1 55175717 . C . PASS END=55175717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 55175718 . T . PASS END=55175718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 55175719 . G . PASS END=55175719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 55175720 . C . PASS END=55175738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1131:0,80,255:30,0 chr1 55175739 . T . PASS END=55175745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 55175746 . C . PASS END=55175752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 55175753 . A . PASS END=55175754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1000:0,68,255:26,0 chr1 55175755 . C . PASS END=55175759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 55175760 . A . PASS END=55175760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 55175761 . C . PASS END=55175765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 55175766 . G . PASS END=55175766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 55175767 . G . PASS END=55175771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 55175772 . C . PASS END=55175772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr1 55175773 . C . PASS END=55175774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 55175775 . G . PASS END=55175775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 55175776 . C . PASS END=55175782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55175783 . A . PASS END=55175806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 55175807 . C . PASS END=55175832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 55175833 . C . PASS END=55175855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 55175856 . A . PASS END=55175856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 55175857 . G . PASS END=55175859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 55175860 . A . PASS END=55175860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 55181196 . C . PASS END=55181202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:19,0 chr1 55181203 . T . PASS END=55181203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 55181204 . A . PASS END=55181219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 55181220 . A . PASS END=55181235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr1 55181236 . G . PASS END=55181236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 55181237 . C . PASS END=55181237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 55181238 . T . PASS END=55181238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:23,0 chr1 55181239 . A . PASS END=55181239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 55181240 . T . PASS END=55181240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 55181241 . A . PASS END=55181282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,853:0,62,255:26,0 chr1 55181283 . A . PASS END=55181283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 55181582 . A . PASS END=55181596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,906:0,62,255:25,0 chr1 55181597 . C . PASS END=55181597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 55181598 . A . PASS END=55181648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,862:0,61,255:25,0 chr1 55181649 . G . PASS END=55181649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 55181650 . C . PASS END=55181650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 55181651 . C . PASS END=55181653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,996:0,81,255:28,0 chr1 55181654 . C . PASS END=55181654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 55181655 . C . PASS END=55181660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55181661 . G . PASS END=55181670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 55181671 . T . PASS END=55181671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:23,0 chr1 55181672 . C . PASS END=55181681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 55181682 . A . PASS END=55181692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,662:0,46,255:19,0 chr1 55182273 . G . PASS END=55182390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:38:0,97,1465:0,97,255:40,0 chr1 55183165 . A . PASS END=55183326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:89:33:0,89,1350:0,89,255:40,0 chr1 55186836 . G . PASS END=55186913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:69:0,120,1800:0,196,255:40,0 chr1 55188348 . G . PASS END=55188430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:29:0,84,1211:0,86,255:40,0 chr1 55188431 . A . PASS END=55188431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1136:0,78,255:34,0 chr1 55188432 . A . PASS END=55188463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,86,255:34,0 chr1 55188464 . A . PASS END=55188472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:24,0 chr1 55194019 . C . PASS END=55194105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,146,255:40,0 chr1 55197159 . G . PASS END=55197174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:19,0 chr1 55197175 . T . PASS END=55197193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:25,0 chr1 55197194 . G . PASS END=55197282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1011:0,81,255:37,0 chr1 55197283 . A . PASS END=55197283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1044:0,60,255:30,0 chr1 55197284 . T . PASS END=55197306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:32,0 chr1 55197307 . C . PASS END=55197308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 55197309 . G . PASS END=55197322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:33,0 chr1 55197323 . C . PASS END=55197339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:61:26:0,61,900:0,61,255:24,0 chr1 55197340 . C . PASS END=55197340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 55197341 . G . PASS END=55197350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 55197351 . T . PASS END=55197351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:20,0 chr1 55197352 . C . PASS END=55197355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55197356 . T . PASS END=55197373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 55199302 . G . PASS END=55199366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:91:56:0,91,1800:0,91,255:40,0 chr1 55199367 . G . PASS END=55199367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,6:71:77:71:0,77,2190:0,77,255:40,0 chr1 55199368 . C . PASS END=55199370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,158,255:40,0 chr1 55199371 . T . PASS END=55199383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:99:67:0,120,1800:0,130,255:40,0 chr1 55203255 . G . PASS END=55203273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1098:0,96,255:33,0 chr1 55203274 . A . PASS END=55203275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr1 55203276 . A . PASS END=55203337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1233:0,86,255:38,0 chr1 55207084 . G . PASS END=55207186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,100,1382:0,100,255:40,0 chr1 55223407 . T . PASS END=55223412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,787:0,75,255:26,0 chr1 55223413 . A . PASS END=55223421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,976:0,81,255:28,0 chr1 55223422 . T . PASS END=55223422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:26,0 chr1 55223423 . G . PASS END=55223430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 55223431 . T . PASS END=55223435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 55223436 . C . PASS END=55223439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 55223440 . G . PASS END=55223440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 55223441 . A . PASS END=55223444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 55223445 . C . PASS END=55223445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 55223446 . A . PASS END=55223472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1141:0,87,255:30,0 chr1 55223473 . A . PASS END=55223473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 55223474 . G . PASS END=55223474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:29,0 chr1 55223475 . T . PASS END=55223475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 55223476 . G . PASS END=55223476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 55223477 . T . PASS END=55223486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 55223487 . A . PASS END=55223487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 55223488 . A . PASS END=55223490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 55223491 . C . PASS END=55223491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 55223492 . T . PASS END=55223493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 55223494 . A . PASS END=55223494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 55223495 . A . PASS END=55223496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 55223497 . A . PASS END=55223505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 55223506 . G . PASS END=55223506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 55223507 . T . PASS END=55223534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,939:0,65,255:26,0 chr1 55223535 . T . PASS END=55223539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 55223540 . A . PASS END=55223548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr1 55223549 . C . PASS END=55223549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:21,0 chr1 55223550 . C . PASS END=55223565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,853:0,61,255:23,0 chr1 55223566 . T . PASS END=55223566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 55223567 . T . PASS END=55223575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 55223576 . T . PASS END=55223576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 55223577 . T . PASS END=55223592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr1 55223593 . G . PASS END=55223593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 55223594 . G . PASS END=55223597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 55223598 . T . PASS END=55223598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 55223599 . G . PASS END=55223611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 55223612 . A . PASS END=55223612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 55223613 . C . PASS END=55223647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:24,0 chr1 55223648 . T . PASS END=55223648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,909:0,50,255:22,0 chr1 55223649 . G . PASS END=55223655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,74,255:26,0 chr1 55223656 . C . PASS END=55223658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55223659 . C . PASS END=55223659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 55223660 . T . PASS END=55223664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 55223665 . T . PASS END=55223666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,878:0,61,255:26,0 chr1 55223667 . T . PASS END=55223756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,958:0,81,255:34,0 chr1 55223757 . A . PASS END=55223757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr1 55223758 . G . PASS END=55223760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:35,0 chr1 55223761 . T . PASS END=55223761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:34,0 chr1 55223762 . T . PASS END=55223960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:34:0,89,1211:0,89,255:40,0 chr1 55223961 . A . PASS END=55223961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr1 55223962 . G . PASS END=55224026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1041:0,82,255:37,0 chr1 55224027 . G . PASS END=55224034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,83,255:26,0 chr1 55224035 . T . PASS END=55224036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 55224037 . T . PASS END=55224037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:28,0 chr1 55224038 . C . PASS END=55224048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 55224049 . T . PASS END=55224049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 55224050 . G . PASS END=55224094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:31,0 chr1 55224095 . T . PASS END=55224097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 55224098 . G . PASS END=55224098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:25,0 chr1 55224099 . C . PASS END=55224106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:28:0,71,1061:0,71,255:26,0 chr1 55224107 . T . PASS END=55224107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,826:0,42,255:25,0 chr1 55224108 . T . PASS END=55224117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:26,0 chr1 55224118 . C . PASS END=55224119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,855:0,42,255:20,0 chr1 55224120 . G . PASS END=55224146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,839:0,65,255:26,0 chr1 55224147 . A . PASS END=55224148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 55224149 . G . PASS END=55224151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 55224152 . T . PASS END=55224160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:31,0 chr1 55224161 . A . PASS END=55224161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 55224162 . G . PASS END=55224182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:30,0 chr1 55224183 . C . PASS END=55224183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 55224184 . C . PASS END=55224198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 55224199 . A . PASS END=55224199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 55224200 . A . PASS END=55224279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1064:0,80,255:35,0 chr1 55224280 . T . PASS END=55224280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:30,0 chr1 55224281 . G . PASS END=55224286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:30,0 chr1 55224287 . T . PASS END=55224288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 55224289 . G . PASS END=55224292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,105,255:29,0 chr1 55224293 . A . PASS END=55224353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:26,0 chr1 55224354 . C . PASS END=55224354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 55224355 . T . PASS END=55224376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 55224377 . C . PASS END=55224377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 55224378 . A . PASS END=55224379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 55224380 . T . PASS END=55224380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 55224381 . A . PASS END=55224384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 55224385 . C . PASS END=55224385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 55224386 . T . PASS END=55224386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55224387 . T . PASS END=55224395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 55224396 . T . PASS END=55224414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr1 55224415 . C . PASS END=55224415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55224416 . T . PASS END=55224416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 55224417 . C . PASS END=55224418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55224419 . T . PASS END=55224419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 55224420 . T . PASS END=55224420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55224421 . G . PASS END=55224515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,534:0,40,255:19,0 chr1 55224516 . G . PASS END=55224532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 55224533 . A . PASS END=55224533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 55224534 . G . PASS END=55224552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:25,0 chr1 55224553 . G . PASS END=55224553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:19,0 chr1 55224554 . G . PASS END=55224568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,861:0,69,255:23,0 chr1 55224569 . T . PASS END=55224598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 55224599 . A . PASS END=55224599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 55224600 . G . PASS END=55224610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 55224611 . A . PASS END=55224621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 55224622 . C . PASS END=55224665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,615:0,45,255:19,0 chr1 55224666 . G . PASS END=55224672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 55224673 . G . PASS END=55224687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:20:0,47,720:0,47,255:19,0 chr1 55224688 . C . PASS END=55224688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55224689 . T . PASS END=55224691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 55224692 . G . PASS END=55224697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55224698 . A . PASS END=55224700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,798:0,50,255:19,0 chr1 55224701 . A . PASS END=55224703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55224704 . C . PASS END=55224705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 55224706 . A . PASS END=55224713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 55224714 . G . PASS END=55224734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:17:0,51,629:0,51,255:18,0 chr1 55224735 . G . PASS END=55224755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,725:0,63,255:22,0 chr1 55224756 . A . PASS END=55224756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 55224757 . A . PASS END=55224764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 55224765 . A . PASS END=55224765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:17,0 chr1 55224766 . C . PASS END=55224776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,735:0,47,255:19,0 chr1 55224777 . G . PASS END=55224779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 55224780 . G . PASS END=55224780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 55224781 . G . PASS END=55224782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 55224783 . T . PASS END=55224798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 55224799 . G . PASS END=55224804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 55224805 . T . PASS END=55224805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 55224806 . G . PASS END=55224823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 55224824 . A . PASS END=55224834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 55246916 . C . PASS END=55246960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:8,0 chr1 55246961 . G . PASS END=55246961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 55246962 . C . PASS END=55246963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 55246964 . C . PASS END=55246964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 55246965 . T . PASS END=55246969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 55246970 . C . PASS END=55246970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 55246971 . T . PASS END=55246971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 55246972 . C . PASS END=55246986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr1 55246987 . G . PASS END=55246988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 55246989 . A . PASS END=55247001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 55247002 . C . PASS END=55247002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 55247003 . C . PASS END=55247008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 55247009 . T . PASS END=55247087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 55247088 . A . PASS END=55247107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 55247108 . G . PASS END=55247108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 55247109 . T . LowGQ END=55247109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 55247110 . C . PASS END=55247161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 55247162 . C . PASS END=55247174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:8:0,12,180:0,24,255:6,0 chr1 55247175 . C . PASS END=55247191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 55247192 . C . PASS END=55247242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 55247243 . C . PASS END=55247283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr1 55247284 . C . PASS END=55247288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 55247289 . C . PASS END=55247307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 55247308 . T . PASS END=55247308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 55247309 . G . PASS END=55247319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 55247320 . G . PASS END=55247364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 55247365 . T . PASS END=55247365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 55247366 . G . PASS END=55247369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 55247370 . A . PASS END=55247378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 55247379 . A . PASS END=55247389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 55247390 . C . PASS END=55247393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 55247394 . G . PASS END=55247394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 55247395 . C . PASS END=55247420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr1 55247421 . T . PASS END=55247421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 55247422 . G . PASS END=55247433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 55247434 . C . PASS END=55247440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 55247441 . A . PASS END=55247441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:10,0 chr1 55247442 . T . PASS END=55247452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 55247998 . C . PASS END=55248001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 55248002 . C . PASS END=55248002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 55248003 . C . PASS END=55248006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 55248007 . G . PASS END=55248007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 55248008 . T . PASS END=55248017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,441:0,36,255:13,0 chr1 55248018 . C . PASS END=55248033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:18,0 chr1 55248034 . C . PASS END=55248038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 55248039 . T . PASS END=55248039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 55248040 . G . PASS END=55248061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 55248062 . T . PASS END=55248062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 55248063 . T . PASS END=55248068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 55248069 . A . PASS END=55248069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55248070 . G . PASS END=55248070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55248071 . G . PASS END=55248128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,598:0,44,255:19,0 chr1 55248129 . G . PASS END=55248140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 55248141 . T . PASS END=55248141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 55248142 . G . PASS END=55248150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 55250400 . C . PASS END=55250403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:26,0 chr1 55250404 . G . PASS END=55250441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1011:0,84,255:38,0 chr1 55250442 . G . PASS END=55250442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1204:0,28,255:35,0 chr1 55250443 . G . PASS END=55250542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1215:0,93,255:40,0 chr1 55250543 . C . PASS END=55250549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:25,0 chr1 55251656 . C . PASS END=55251668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:24,0 chr1 55251669 . C . PASS END=55251669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 55251670 . A . PASS END=55251673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr1 55251674 . C . PASS END=55251674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 55251675 . G . PASS END=55251680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 55251681 . C . PASS END=55251688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr1 55251689 . T C, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,16,0:0,14,0:87:175,90,0,1161,90,1161:255,90,0:0,0:1.3729e+02,8.7291e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,11:0,0,17,13 chr1 55251690 . T . PASS END=55251690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:28,0 chr1 55251691 . C . PASS END=55251726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1203:0,83,255:36,0 chr1 55251727 . T . PASS END=55251817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:38:0,81,1360:0,81,255:40,0 chr1 55252630 . C . PASS END=55252632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 55252633 . G . PASS END=55252641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 55252642 . G . PASS END=55252657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,968:0,72,255:26,0 chr1 55252658 . C . PASS END=55252679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,948:0,81,255:30,0 chr1 55252680 . C . PASS END=55252680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr1 55252681 . G . PASS END=55252726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1164:0,83,255:33,0 chr1 55252727 . C . PASS END=55252729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 55252730 . A . PASS END=55252732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 55252733 . T . PASS END=55252733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:26,0 chr1 55252734 . A . PASS END=55252737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1172:0,83,255:29,0 chr1 55252738 . C . PASS END=55252744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:24,0 chr1 55252745 . A . PASS END=55252745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:20,0 chr1 55252746 . G . PASS END=55252748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:22,0 chr1 55253384 . C . PASS END=55253391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:37:0,63,945:0,98,255:25,0 chr1 55253392 . C CG, 41.32 PASS DP=41;MQ=250.00;MQRankSum=5.182;ReadPosRankSum=1.306;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,14,0:0.341,0.000:41:17,4,0:10,10,0:41:70,0,50,410,793,1203:255,0,255:21,21:4.1324e+01,3.4197e-04,5.3000e+01,4.1624e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:16,11,11,3:14,13,3,11 chr1 55253393 . G . LowGQ END=55253393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,13:41:0:41:0,0,551:255,0,255:34,0 chr1 55253394 . G . PASS END=55253435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:89:41:0,89,1485:0,89,255:40,0 chr1 55253436 . G . PASS END=55253499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:35:0,93,1395:0,105,255:40,0 chr1 55253715 . C . PASS END=55253770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:35:0,94,1266:0,94,255:38,0 chr1 55266270 . C . PASS END=55266293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr1 55266294 . G . PASS END=55266329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:15,0 chr1 55266330 . A . PASS END=55266330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 55266331 . C . PASS END=55266337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 55266338 . C . PASS END=55266345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55266346 . G . PASS END=55266347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 55266348 . G . PASS END=55266355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 55266356 . C . PASS END=55266363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 55266364 . C . PASS END=55266365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 55266366 . A . LowGQ END=55266366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:13,0,255:11,0 chr1 55266367 . T . PASS END=55266372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 55266373 . T . PASS END=55266374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:9,0 chr1 55266375 . G . PASS END=55266399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 55266400 . G . PASS END=55266416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 55266417 . C . PASS END=55266417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 55266418 . C . PASS END=55266435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr1 55266436 . T . PASS END=55266436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 55266437 . C . PASS END=55266477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:18,0 chr1 55266478 . T . PASS END=55266478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 55266479 . C . PASS END=55266485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:17,0 chr1 55266486 . T . PASS END=55266486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 55266487 . T . PASS END=55266513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,517:0,51,255:18,0 chr1 55266514 . T . PASS END=55266514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 55266515 . G . PASS END=55266515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 55266516 . T . PASS END=55266516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 55266517 . G . PASS END=55266557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,601:0,40,255:19,0 chr1 55266558 . G . PASS END=55266558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 55266559 . G . PASS END=55266566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 55266567 . G . PASS END=55266567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 55266568 . A . PASS END=55266570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 55266571 . A . PASS END=55266587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:13:0,32,540:0,32,255:13,0 chr1 55266588 . G . PASS END=55266595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,523:0,48,255:16,0 chr1 55266596 . C . PASS END=55266596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 55266597 . C . PASS END=55266622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,568:0,48,255:17,0 chr1 55266623 . G . PASS END=55266623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 55266624 . G . PASS END=55266624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 55266625 . A . PASS END=55266637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,496:0,39,255:13,0 chr1 55266638 . C . PASS END=55266681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,519:0,42,255:18,0 chr1 55266682 . C . PASS END=55266694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 55266695 . G . PASS END=55266695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 55266696 . C . PASS END=55266701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55266702 . G . PASS END=55266702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 55266703 . T . PASS END=55266706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 55266707 . G . PASS END=55266713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 55266714 . C . PASS END=55266716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 55266717 . T . PASS END=55266717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 55266718 . G . PASS END=55266719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 55266720 . G . PASS END=55266720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 55266721 . G . PASS END=55266721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 55266722 . C . PASS END=55266722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 55266723 . C . PASS END=55266724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 55266725 . G . PASS END=55266725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 55266726 . C . PASS END=55266734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 55266735 . C . PASS END=55266735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 55266736 . T . PASS END=55266806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,821:0,66,255:25,0 chr1 55266807 . A . PASS END=55266807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 55266808 . T . PASS END=55266812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 55266813 . G . PASS END=55266813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 55266814 . G . PASS END=55266818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55266819 . A . PASS END=55266836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 55271790 . A . PASS END=55271791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,519:0,45,255:15,0 chr1 55271792 . G . PASS END=55271793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55271794 . G . PASS END=55271794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 55271795 . G . PASS END=55271796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55271797 . A . PASS END=55271797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 55271798 . A . PASS END=55271811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 55271812 . C . PASS END=55271813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 55271814 . G . PASS END=55271855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,566:0,41,255:18,0 chr1 55271856 . T . PASS END=55271856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 55271857 . G . PASS END=55271860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 55271861 . C . PASS END=55271861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 55271862 . A . PASS END=55271877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr1 55271878 . G . PASS END=55271892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 55271893 . G . PASS END=55271893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 55272669 . G . PASS END=55272756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,122,255:40,0 chr1 55273199 . T . PASS END=55273335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,87,255:40,0 chr1 55273336 . G . PASS END=55273348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:27,0 chr1 55273349 . G . PASS END=55273350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55273351 . G . PASS END=55273351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:26,0 chr1 55273352 . A . PASS END=55273353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 55273354 . G . LowGQ END=55273354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,8:29:0:29:0,0,510:60,0,255:20,0 chr1 55273355 . C . PASS END=55273355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55273356 . G . PASS END=55273356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,662:0,17,255:23,0 chr1 55273357 . G . PASS END=55273363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 55273562 . G . PASS END=55273562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 55273563 . A . PASS END=55273579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:18,0 chr1 55273580 . G T, 101.18 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,8,0:0,10,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,10:0,0,12,6 chr1 55273581 . G . PASS END=55273601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,676:0,54,255:19,0 chr1 55273602 . T . PASS END=55273617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:21,0 chr1 55273618 . G . PASS END=55273629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 55273630 . T . PASS END=55273630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 55273631 . A . PASS END=55273664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 55273665 . G . PASS END=55273666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55273667 . T . PASS END=55273683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 55273684 . G . PASS END=55273684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 55277467 . A . PASS END=55277467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 55277468 . A . PASS END=55277468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:18,0 chr1 55277469 . C . PASS END=55277469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 55277470 . T . PASS END=55277470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,762:0,20,255:23,0 chr1 55277471 . A . PASS END=55277471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 55277472 . C . PASS END=55277473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:24,0 chr1 55277474 . A . PASS END=55277476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 55277477 . C . PASS END=55277478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55277479 . G . PASS END=55277479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 55277480 . G . PASS END=55277480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 55277481 . C . PASS END=55277482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55277483 . C . PASS END=55277485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 55277486 . G . PASS END=55277486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr1 55277487 . A . PASS END=55277487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55277488 . A . PASS END=55277488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:28,0 chr1 55277489 . A . PASS END=55277489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55277490 . T . PASS END=55277490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 55277491 . T . PASS END=55277491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 55277492 . A . PASS END=55277492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55277493 . T . PASS END=55277496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 55277497 . G . PASS END=55277497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 55277498 . A . PASS END=55277499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 55277500 . A . PASS END=55277501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 55277502 . G . PASS END=55277502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 55277503 . G . PASS END=55277510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:35,0 chr1 55277511 . A . PASS END=55277511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:34,0 chr1 55277512 . T . PASS END=55277513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:35,0 chr1 55277514 . C . PASS END=55277514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:37,0 chr1 55277515 . A . PASS END=55277531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1365:0,81,255:39,0 chr1 55277532 . T . PASS END=55277532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1382:0,76,255:37,0 chr1 55277533 . G . PASS END=55277542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1426:0,82,255:38,0 chr1 55277543 . G . PASS END=55277543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1351:0,65,255:36,0 chr1 55277544 . G . PASS END=55277544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1357:0,84,255:35,0 chr1 55277545 . T . PASS END=55277547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1297:0,78,255:36,0 chr1 55277548 . C . PASS END=55277549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1426:0,101,255:35,0 chr1 55277550 . T . PASS END=55277551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:35,0 chr1 55277552 . C . PASS END=55277552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:35,0 chr1 55277553 . C . PASS END=55277554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 55277555 . A . PASS END=55277556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1371:0,95,255:33,0 chr1 55277557 . G . PASS END=55277557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:34,0 chr1 55277558 . G . PASS END=55277558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1388:0,98,255:34,0 chr1 55277559 . C . PASS END=55277560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:34,0 chr1 55277561 . T . PASS END=55277561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1347:0,95,255:32,0 chr1 55277562 . C . PASS END=55277598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1208:0,83,255:33,0 chr1 55277599 . T C, 140.30 PASS DP=38;MQ=250.00;FractionInformativeReads=0.816 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,12,0:0,19,0:90:178,93,0,1202,93,1202:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,16:0,0,12,19 chr1 55277600 . A . PASS END=55277600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 55277601 . T . PASS END=55277601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 55277602 . C . PASS END=55277604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 55277719 . G . PASS END=55277723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55277724 . T . PASS END=55277725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 55277726 . G . PASS END=55277726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 55277727 . T . PASS END=55277741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:26:0,74,941:0,74,255:26,0 chr1 55277742 . C . PASS END=55277742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 55277743 . T . PASS END=55277744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 55277745 . C . PASS END=55277745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:26,0 chr1 55277746 . T . PASS END=55277757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:28,0 chr1 55277758 . G . PASS END=55277758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55277759 . A . PASS END=55277762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 55277763 . T . PASS END=55277763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 55277764 . G . PASS END=55277764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55277765 . A . PASS END=55277765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 55277766 . G . PASS END=55277821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1102:0,84,255:31,0 chr1 55277822 . A . PASS END=55277833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1094:0,77,255:29,0 chr1 55277834 . C . PASS END=55277836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 55277837 . T . PASS END=55277840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 55277841 . T . PASS END=55277841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr1 55277842 . T . PASS END=55277850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 55277851 . T . PASS END=55277851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:20,0 chr1 55277852 . A . PASS END=55277862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:20:0,48,720:0,60,255:19,0 chr1 55279487 . A . PASS END=55279619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:37:0,87,1305:0,101,255:40,0 chr1 55279620 . C . PASS END=55279620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:29,0 chr1 55279621 . C . PASS END=55279633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:29,0 chr1 55279634 . T . PASS END=55279643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr1 55279644 . C . PASS END=55279645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr1 55279646 . C . PASS END=55279646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:18,0 chr1 55279647 . T . PASS END=55279648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 55280587 . G . PASS END=55280599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,676:0,51,255:18,0 chr1 55280600 . C . PASS END=55280600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 55280601 . C . PASS END=55280611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 55280612 . T . PASS END=55280622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:22,0 chr1 55280623 . A . PASS END=55280623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 55280624 . A . PASS END=55280642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,829:0,66,255:25,0 chr1 55280643 . C . PASS END=55280643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 55280644 . C . PASS END=55280645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 55280646 . G . PASS END=55280646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 55280647 . C . PASS END=55280677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,893:0,62,255:26,0 chr1 55280678 . G . PASS END=55280678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 55280679 . T . PASS END=55280680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 55280681 . C . PASS END=55280682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,831:0,56,255:20,0 chr1 55280683 . A . PASS END=55280687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 55280688 . C . PASS END=55280694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 55280695 . A . PASS END=55280695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,590:0,5,255:18,0 chr1 55280696 . T . PASS END=55280699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55280700 . T . PASS END=55280700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 55280701 . A . PASS END=55280712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 55282662 . A . PASS END=55282683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,101,1321:0,101,255:40,0 chr1 55282684 . A . PASS END=55282720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,119,1681:0,119,255:40,0 chr1 55282721 . G C, 49.80 PASS DP=46;MQ=249.09;MQRankSum=5.289;ReadPosRankSum=4.255;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,22,0:0.478,0.000:46:14,10,0:10,12,0:48:85,0,50,753,858,1612:255,0,255:23,0:4.9803e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,7,15:12,12,11,11 chr1 55282722 . C . PASS END=55282758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:35:0,96,1440:0,105,255:40,0 chr1 55282759 . G . PASS END=55282773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 55282774 . T . PASS END=55282784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,978:0,67,255:24,0 chr1 55282785 . A . PASS END=55282785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 55282786 . T . PASS END=55282795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 55290541 . G . PASS END=55290661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:42:0,90,1350:0,110,255:40,0 chr1 55290662 . T . PASS END=55290664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:72:41:0,72,1080:0,123,255:24,0 chr1 55302919 . G . PASS END=55302922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,120,1800:0,126,255:40,0 chr1 55307289 . A . PASS END=55307349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,167,255:40,0 chr1 55307474 . G . PASS END=55307546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,120,1800:0,140,255:40,0 chr1 55315392 . T . PASS END=55315392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 55315403 . G . PASS END=55315403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 55315438 . A . PASS END=55315438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 55315512 . T . PASS END=55315512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:22,0 chr1 55315661 . T . PASS END=55315661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:18,0 chr1 55315787 . G . PASS END=55315787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 55315826 . G . PASS END=55315826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 55315868 . C . PASS END=55315868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 55316025 . C . PASS END=55316025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 55316030 . A . PASS END=55316030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 55316091 . T . PASS END=55316091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 55316371 . C . PASS END=55316371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 55316417 . C . PASS END=55316417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr1 55316482 . G . PASS END=55316482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:33,0 chr1 55316517 . A . PASS END=55316517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 55316639 . C . PASS END=55316639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55316642 . A . PASS END=55316642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 55316769 . C . PASS END=55316769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 55316785 . T . PASS END=55316785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 55316833 . G . PASS END=55316833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55316922 . C . PASS END=55316922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,895:0,78,255:26,0 chr1 55316992 . C . PASS END=55316992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 55317230 . G . PASS END=55317230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,877:0,64,255:26,0 chr1 55317306 . C . PASS END=55317306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 55317309 . A . PASS END=55317309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 55317329 . G . PASS END=55317329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55317398 . A . PASS END=55317398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:24,0 chr1 55317472 . T . PASS END=55317472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 55317480 . C . PASS END=55317480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 55317590 . A . PASS END=55317590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 55317628 . C . PASS END=55317628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 55317681 . A . PASS END=55317681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:49:28:0,49,974:0,49,255:26,1 chr1 55317724 . A . PASS END=55317724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 55317734 . T . PASS END=55317734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 55317781 . T . PASS END=55317781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 55317906 . T . PASS END=55317921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1149:0,93,255:31,0 chr1 55317922 . T . PASS END=55318059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:31:0,82,1140:0,82,255:40,0 chr1 55319105 . A . PASS END=55319105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 55319107 . C . PASS END=55319212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:39:0,93,1314:0,93,255:40,0 chr1 55319213 . C . PASS END=55319213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,6:48:30:48:0,30,1343:0,30,255:40,0 chr1 55319214 . C . PASS END=55319275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1260:0,95,255:40,0 chr1 55319276 . T . PASS END=55319276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 55319277 . G . PASS END=55319285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:29:0,48,720:0,87,255:16,0 chr1 55319710 . G . PASS END=55319718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 55319719 . G . PASS END=55319736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr1 55319737 . G . PASS END=55319764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 55319765 . A . PASS END=55319765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 55319766 . G . PASS END=55319809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,837:0,66,255:26,0 chr1 55319810 . G . PASS END=55319816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 55319817 . C . PASS END=55319817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 55319818 . C . PASS END=55319818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 55319819 . T . PASS END=55319819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:27,0 chr1 55319820 . G . PASS END=55319837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1081:0,80,255:31,0 chr1 55319838 . A . PASS END=55319838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr1 55319839 . G . PASS END=55319864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1140:0,83,255:33,0 chr1 55319865 . A . PASS END=55319892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1140:0,80,255:31,0 chr1 55319893 . A . PASS END=55319900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:24,0 chr1 55319901 . T . PASS END=55319901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:19,0 chr1 55319902 . A G, 127.80 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,7,0:0,20,0:78:166,81,0,1012,81,1012:255,81,0:0,0:1.2780e+02,7.7796e+01,0.0000e+00,4.5000e+02,1.1257e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,20:0,0,15,12 chr1 55319903 . A . PASS END=55319904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 55319905 . G . PASS END=55319907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 55321662 . C . PASS END=55321663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1620:0,114,255:38,0 chr1 55321664 . T . PASS END=55321697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:39:0,84,1173:0,84,255:40,0 chr1 55330976 . C . PASS END=55330983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 55330984 . C . PASS END=55331003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,988:0,81,255:32,0 chr1 55331004 . T . PASS END=55331006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 55331007 . C . PASS END=55331007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 55331008 . G . PASS END=55331105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1249:0,89,255:40,0 chr1 55331106 . C . PASS END=55331119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:25,0 chr1 55337023 . C . PASS END=55337026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 55337027 . C . PASS END=55337035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,484:0,42,255:16,0 chr1 55337036 . G . PASS END=55337036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 55337037 . C . PASS END=55337062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,598:0,48,255:19,0 chr1 55337063 . A . PASS END=55337063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 55337064 . T . PASS END=55337064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 55337065 . G . PASS END=55337073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,670:0,60,255:24,0 chr1 55337074 . A . PASS END=55337074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 55337075 . T . PASS END=55337076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 55337077 . C . PASS END=55337077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 55337078 . A . PASS END=55337081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:26,0 chr1 55337082 . A . PASS END=55337082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55337083 . G . PASS END=55337115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,886:0,61,255:26,0 chr1 55337116 . C . PASS END=55337116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 55337117 . C . PASS END=55337117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:25,0 chr1 55337118 . G . PASS END=55337122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:29,0 chr1 55337123 . G . PASS END=55337123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr1 55337124 . A . PASS END=55337239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1111:0,80,255:38,0 chr1 55337240 . G . PASS END=55337240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:30,0 chr1 55337241 . T . PASS END=55337249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1186:0,83,255:30,0 chr1 55337250 . A . PASS END=55337250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 55337251 . C . PASS END=55337253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55337254 . G . PASS END=55337263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,74,255:26,0 chr1 55337264 . T . PASS END=55337286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,690:0,54,255:18,0 chr1 55340766 . C . PASS END=55340766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 55340767 . G . PASS END=55340769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 55340770 . G . PASS END=55340770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 55340771 . T . PASS END=55340879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:80:28:0,80,1036:0,80,255:40,0 chr1 55340880 . G . PASS END=55340880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:28,0 chr1 55340881 . C . PASS END=55340882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:29,0 chr1 55340883 . C . PASS END=55340884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:77:31:0,77,1086:0,77,255:26,0 chr1 55341615 . C . PASS END=55341720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:37:0,93,1395:0,104,255:40,0 chr1 55341730 . C . PASS END=55341730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 55345464 . T . PASS END=55345478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:79:0,120,1800:0,224,255:40,0 chr1 55349291 . C . PASS END=55349442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:31:0,84,1149:0,87,255:40,0 chr1 55349443 . G . PASS END=55349443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 55349444 . C . PASS END=55349446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 55352291 . C . PASS END=55352297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 55352298 . C . PASS END=55352298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,329:0,5,255:11,0 chr1 55352299 . T . PASS END=55352300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 55352301 . C . PASS END=55352301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 55352302 . G . PASS END=55352302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 55352303 . C . PASS END=55352303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:10,0 chr1 55352304 . A . LowGQ END=55352305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,308:0,0,255:10,0 chr1 55352306 . C . PASS END=55352307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 55352308 . C . PASS END=55352308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 55352309 . C . LowGQ END=55352310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,341:0,0,255:10,0 chr1 55352311 . C . PASS END=55352311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,360:0,22,255:10,0 chr1 55352312 . C . PASS END=55352316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 55352317 . C . PASS END=55352317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 55352318 . C . PASS END=55352320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 55352321 . T . PASS END=55352321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 55352322 . T . PASS END=55352323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 55352324 . T . LowGQ END=55352324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:12,0 chr1 55352325 . T . PASS END=55352326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 55352327 . A . PASS END=55352327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 55352328 . T . PASS END=55352329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 55352330 . T . PASS END=55352330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 55352331 . C . PASS END=55352334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 55352335 . C . PASS END=55352340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 55352341 . A . PASS END=55352355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 55352356 . G . PASS END=55352357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 55352358 . A . PASS END=55352358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 55352359 . C . PASS END=55352359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 55352360 . A . PASS END=55352360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 55352361 . C . PASS END=55352361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 55352362 . A . PASS END=55352362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 55352363 . G . PASS END=55352364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 55352365 . G . PASS END=55352368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,596:0,48,255:16,0 chr1 55352369 . A . PASS END=55352378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,495:0,31,255:13,0 chr1 55352379 . T . PASS END=55352379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:9,0 chr1 55352380 . T . PASS END=55352380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 55352381 . C . PASS END=55352381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 55352382 . T . PASS END=55352383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 55352384 . T . PASS END=55352384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:11,0 chr1 55352385 . T . PASS END=55352385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 55352386 . C . LowGQ END=55352387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:12:0,0,233:24,0,255:9,0 chr1 55352388 . C . PASS END=55352389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 55352390 . C . PASS END=55352391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr1 55352392 . C . PASS END=55352392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,266:0,3,255:10,0 chr1 55352393 . C . PASS END=55352396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr1 55352397 . A . LowGQ END=55352398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:12:0,0,200:30,0,244:8,0 chr1 55352562 . C . PASS END=55352563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 55352564 . G . PASS END=55352565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 55352566 . T . LowGQ END=55352566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr1 55352567 . T . PASS END=55352568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 55352569 . T . PASS END=55352569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 55352570 . G . PASS END=55352572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 55352573 . T . PASS END=55352573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 55352574 . G . PASS END=55352575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 55352576 . C . PASS END=55352576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 55352577 . C . PASS END=55352581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 55352582 . C . PASS END=55352587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:12,0 chr1 55352588 . G . PASS END=55352594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 55352595 . C . PASS END=55352595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 55352596 . A . PASS END=55352605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,598:0,48,255:19,0 chr1 55352606 . C . PASS END=55352607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 55352608 . C . PASS END=55352613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55352614 . A . PASS END=55352623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 55352624 . C . PASS END=55352637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr1 55352638 . A . PASS END=55352638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 55352639 . C . PASS END=55352792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1154:0,83,255:40,0 chr1 55352803 . C . PASS END=55352803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 55352819 . C . PASS END=55352819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 55352834 . T . PASS END=55352834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 55352869 . G . PASS END=55352869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 55446739 . A . PASS END=55446753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:38:0,90,1350:0,114,255:40,0 chr1 55451770 . A . PASS END=55451790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr1 55451791 . G . PASS END=55451792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 55451793 . C . PASS END=55451793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 55451794 . T . PASS END=55451795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 55451796 . C . PASS END=55451796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 55451797 . A . PASS END=55451797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 55451798 . C . PASS END=55451800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 55451801 . T . PASS END=55451802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:25,0 chr1 55451803 . C . PASS END=55451803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 55451804 . G . PASS END=55451806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,954:0,78,255:26,0 chr1 55451807 . A . PASS END=55451810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 55451811 . C . PASS END=55451811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 55451812 . A . PASS END=55451812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 55451813 . T . PASS END=55451817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 55451818 . G . PASS END=55451821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 55451822 . G . PASS END=55451822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 55451823 . C . PASS END=55451823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 55451824 . G . PASS END=55451824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 55451825 . G . PASS END=55451825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 55451826 . C . PASS END=55451826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 55451827 . A . PASS END=55451829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 55451830 . G . PASS END=55451830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 55451831 . T . PASS END=55451835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 55451836 . C . PASS END=55451836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 55451837 . T . PASS END=55451847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1180:0,93,255:31,0 chr1 55451848 . A . PASS END=55451865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:26:0,61,900:0,61,255:26,0 chr1 55451866 . T . PASS END=55451873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,62,255:19,0 chr1 55451874 . A . PASS END=55451874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 55451875 . G . PASS END=55451903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 55451904 . G . PASS END=55451904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:17,0 chr1 55451905 . G . PASS END=55451911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 55451912 . C . PASS END=55451918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 55451919 . G . PASS END=55451935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:19,0 chr1 55451936 . G . PASS END=55451936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 55451937 . C . PASS END=55451937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 55451938 . C . PASS END=55451938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr1 55451939 . C . PASS END=55451947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:18,0 chr1 55451948 . T . PASS END=55451948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,543:0,2,255:13,0 chr1 55451949 . G . PASS END=55451986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 55451987 . G . PASS END=55451989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55451990 . T . PASS END=55452003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,676:0,57,255:19,0 chr1 55452004 . G . PASS END=55452015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 55452016 . T . PASS END=55452018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55452019 . G . PASS END=55452021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55452022 . A . PASS END=55452032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 55452033 . C . PASS END=55452034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 55452035 . C . PASS END=55452045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 55452046 . C . PASS END=55452046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 55452047 . G . PASS END=55452048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 55452049 . T . PASS END=55452051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 55452052 . G . PASS END=55452068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,668:0,43,255:17,0 chr1 55452069 . C . PASS END=55452069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 55452070 . A . PASS END=55452085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,620:0,45,255:16,0 chr1 55452086 . T . PASS END=55452098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 55452099 . C . PASS END=55452111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 55452112 . A . PASS END=55452119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 55457509 . G . PASS END=55457510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 55457511 . C . PASS END=55457526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 55457527 . C . PASS END=55457542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:17,0 chr1 55457543 . G . PASS END=55457543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 55457544 . A . PASS END=55457566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,698:0,54,255:19,0 chr1 55457567 . G . PASS END=55457583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,693:0,60,255:25,0 chr1 55457584 . A . PASS END=55457584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,820:0,20,255:23,0 chr1 55457585 . C . PASS END=55457585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55457586 . C . PASS END=55457591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 55457592 . A . PASS END=55457592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 55457593 . C . PASS END=55457628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:36,0 chr1 55457629 . G . PASS END=55457629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1226:0,61,255:34,0 chr1 55457630 . G . PASS END=55457672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1249:0,89,255:36,0 chr1 55457673 . A . PASS END=55457698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1133:0,90,255:32,0 chr1 55457699 . G . PASS END=55457699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 55457700 . C . PASS END=55457707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 55457708 . G . PASS END=55457708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 55457709 . C . PASS END=55457709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 55457710 . G A, 129.41 PASS DP=32;MQ=250.00;MQRankSum=1.621;ReadPosRankSum=1.174;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,30,0:0.968,0.000:31:1,18,0:0,12,0:79:167,82,0,1094,89,1101:255,77,0:1,0:1.2941e+02,7.9412e+01,0.0000e+00,4.5000e+02,1.2114e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,12,18:1,0,16,14 chr1 55457711 . G . PASS END=55457723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1161:0,80,255:32,0 chr1 55457724 . G . PASS END=55457746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 55457747 . C . PASS END=55457747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 55457748 . T . PASS END=55457756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 55457757 . C . PASS END=55457776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:19,0 chr1 55464685 . C . PASS END=55464685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 55464826 . G . PASS END=55464826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 55464860 . A . PASS END=55464866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 55464867 . A . PASS END=55464867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:15,0 chr1 55464868 . C . PASS END=55464871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 55464872 . A . PASS END=55464872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,574:0,5,255:16,0 chr1 55464873 . A . PASS END=55464879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,605:0,54,255:18,0 chr1 55464880 . C . PASS END=55464880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 55464881 . C . PASS END=55464895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,645:0,41,255:18,0 chr1 55464896 . G . PASS END=55464915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 55464916 . G . PASS END=55464922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 55464923 . G . PASS END=55464939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:23,0 chr1 55464940 . C . PASS END=55464940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 55464941 . C . PASS END=55464943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 55464944 . G . PASS END=55464944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:19,0 chr1 55464945 . A . PASS END=55464947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 55464948 . G . PASS END=55464948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55464949 . G . PASS END=55464953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 55464954 . A . PASS END=55464954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55464955 . G . PASS END=55464960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 55464961 . C . PASS END=55464961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 55464962 . G . PASS END=55464964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 55464965 . A . PASS END=55465003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:19,0 chr1 55465004 . A . PASS END=55465004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 55465005 . T . PASS END=55465011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 55465012 . G . PASS END=55465022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 55465023 . A . PASS END=55465023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 55465024 . G . PASS END=55465029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 55465030 . C . PASS END=55465030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 55465031 . C . PASS END=55465034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 55465035 . A . PASS END=55465036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 55470695 . A . PASS END=55470700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 55470701 . T . PASS END=55470701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 55470702 . T . PASS END=55470712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr1 55470713 . G . PASS END=55470728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 55470729 . G . PASS END=55470740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55470741 . C . PASS END=55470742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 55470743 . A . PASS END=55470773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,644:0,54,255:19,0 chr1 55470774 . C . PASS END=55470774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 55470775 . T . PASS END=55470776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 55470777 . C . PASS END=55470777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 55470778 . C . PASS END=55470790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:17,0 chr1 55472670 . C . PASS END=55472681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:16,0 chr1 55472682 . G . PASS END=55472682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 55472683 . C . PASS END=55472689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 55472690 . A . PASS END=55472722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 55472723 . A . PASS END=55472723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 55472724 . G . PASS END=55472761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,840:0,61,255:26,0 chr1 55472762 . T . PASS END=55472762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:21,0 chr1 55472763 . G . PASS END=55472766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 55472767 . T . PASS END=55472767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 55472768 . A . PASS END=55472789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,968:0,68,255:26,0 chr1 55472790 . G . PASS END=55472794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55472795 . C . PASS END=55472795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 55472796 . C . PASS END=55472803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 55472804 . T . PASS END=55472804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 55472805 . G . PASS END=55472806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55472807 . G . PASS END=55472808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 55472809 . C . PASS END=55472819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 55472820 . G . PASS END=55472820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 55472821 . G . PASS END=55472823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55472824 . A . PASS END=55472832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,955:0,67,255:26,0 chr1 55472833 . G . PASS END=55472833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:21,0 chr1 55472834 . G . PASS END=55472856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,933:0,78,255:26,0 chr1 55472857 . G . PASS END=55472860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 55472861 . A . PASS END=55472861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55472862 . G . PASS END=55472863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55472864 . C . PASS END=55472868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 55472869 . A . PASS END=55472869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 55472870 . T . PASS END=55472872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 55472873 . A . PASS END=55472881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55472882 . T . PASS END=55472908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,937:0,62,255:26,0 chr1 55472909 . G . PASS END=55472909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 55472910 . T . PASS END=55472910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 55472911 . G . PASS END=55472911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 55472912 . A . PASS END=55472912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 55472913 . A . PASS END=55472932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,582:0,40,255:19,0 chr1 55472933 . A . PASS END=55472933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:14,0 chr1 55472934 . G . PASS END=55472945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 55473887 . C . PASS END=55473893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 55473894 . G . PASS END=55473896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 55473897 . T . PASS END=55473897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 55473898 . G . PASS END=55473900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:26,0 chr1 55473901 . C . PASS END=55473904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 55473905 . G . PASS END=55473906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55473907 . G . PASS END=55473932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:30,0 chr1 55473933 . G . PASS END=55473934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:29,0 chr1 55473935 . T . PASS END=55474156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1117:0,80,255:36,0 chr1 55474157 . A . PASS END=55474157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1187:0,74,255:33,0 chr1 55474158 . A . PASS END=55474301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:35:0,87,919:0,87,255:40,0 chr1 55474307 . T . PASS END=55474307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 55474316 . G . PASS END=55474316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 55474357 . T . PASS END=55474357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 55505158 . G . PASS END=55505158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 55505165 . G . PASS END=55505165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 55505180 . C . PASS END=55505180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 55505266 . G . PASS END=55505266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 55505274 . T . PASS END=55505274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 55505290 . T . PASS END=55505290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 55505311 . C . PASS END=55505311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55505326 . A . PASS END=55505326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 55505331 . T . PASS END=55505331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 55505371 . C . PASS END=55505371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 55505438 . A . PASS END=55505438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 55505443 . C . PASS END=55505444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55505503 . T . PASS END=55505503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 55505511 . A . PASS END=55505525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:33:0,84,1205:0,86,255:31,0 chr1 55505526 . T . PASS END=55505526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:29,0 chr1 55505527 . C . PASS END=55505551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,92,255:32,0 chr1 55505552 . A . PASS END=55505552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1125:0,28,255:27,4 chr1 55505553 . C . LowGQ END=55505555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1065:28,0,255:27,4 chr1 55505556 . C . PASS END=55505556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1133:0,25,255:30,0 chr1 55505557 . T . PASS END=55505648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:32,0 chr1 55505649 . T . PASS END=55505683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 55505684 . C . PASS END=55505684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 55505685 . G . PASS END=55505694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 55505695 . C . PASS END=55505715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 55505716 . A . PASS END=55505717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 55505722 . G . PASS END=55505722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55509502 . T . PASS END=55509502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 55509509 . G . PASS END=55509509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 55509516 . G . PASS END=55509523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 55509524 . G . PASS END=55509529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 55509530 . G . PASS END=55509530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 55509531 . C . PASS END=55509548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,884:0,66,255:26,0 chr1 55509549 . G . PASS END=55509578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1024:0,81,255:31,0 chr1 55509579 . T . PASS END=55509591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr1 55509592 . C . PASS END=55509592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:21,0 chr1 55509593 . C . PASS END=55509596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 55509597 . C . PASS END=55509597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 55509598 . G . PASS END=55509604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 55509605 . G . PASS END=55509605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 55509606 . G . PASS END=55509621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,829:0,69,255:24,0 chr1 55509622 . G . PASS END=55509622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 55509623 . G . PASS END=55509636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:23,0 chr1 55509637 . A . PASS END=55509637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 55509638 . G . PASS END=55509638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 55509639 . A . PASS END=55509639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:20,0 chr1 55509640 . T . PASS END=55509642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 55509643 . T . PASS END=55509643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:20,0 chr1 55509644 . G . PASS END=55509648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 55509649 . T . PASS END=55509649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 55509650 . C . PASS END=55509653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 55509654 . C . PASS END=55509654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 55509655 . A . PASS END=55509655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 55509656 . T . PASS END=55509659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 55509660 . C . PASS END=55509660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 55509661 . T . PASS END=55509669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,737:0,49,255:18,0 chr1 55509670 . G . PASS END=55509670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:16,0 chr1 55509671 . C . PASS END=55509680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 55509681 . A . PASS END=55509681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 55509682 . A . PASS END=55509696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,637:0,41,255:18,0 chr1 55509697 . T . PASS END=55509697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 55509698 . G . PASS END=55509698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 55509699 . C . PASS END=55509699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 55509700 . T . PASS END=55509701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 55509702 . G . PASS END=55509703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 55509704 . G . PASS END=55509707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:17,0 chr1 55509711 . A . PASS END=55509711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 55509717 . C . PASS END=55509717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 55512102 . G . PASS END=55512102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 55512174 . C . PASS END=55512174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 55512185 . G . PASS END=55512185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,117,1755:0,138,255:39,0 chr1 55512192 . G . PASS END=55512192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr1 55512196 . G . PASS END=55512312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:33:0,80,1210:0,80,255:40,0 chr1 55512313 . C . PASS END=55512313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:26,0 chr1 55512314 . C . PASS END=55512314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 55512315 . C . PASS END=55512320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:25,0 chr1 55517016 . G . PASS END=55517028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:12,0 chr1 55517029 . A . PASS END=55517029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr1 55517030 . G . PASS END=55517037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 55517038 . C . PASS END=55517038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 55517039 . C . PASS END=55517074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:12,0 chr1 55517075 . A . PASS END=55517075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 55517076 . A . PASS END=55517076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 55517077 . G . PASS END=55517082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 55517083 . C . PASS END=55517107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,358:0,30,255:11,0 chr1 55517940 . G A, 49.55 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=1.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,7,0:0.438,0.000:16:3,3,0:6,4,0:48:84,0,50,242,293,535:215,0,255:8,0:4.9552e+01,6.9893e-05,5.3000e+01,2.4231e+02,3.2789e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,2,5,2:3,6,3,4 chr1 55517946 . G . PASS END=55517946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 55517951 . A . PASS END=55517969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,584:0,41,255:19,0 chr1 55517970 . G . PASS END=55517977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 55517978 . T . PASS END=55517986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 55517987 . C . PASS END=55517987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 55517988 . C . PASS END=55517991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,884:0,61,255:26,0 chr1 55517992 . A . PASS END=55517997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 55517998 . A . PASS END=55517998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 55517999 . G . PASS END=55518004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:30,0 chr1 55518005 . A . PASS END=55518005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 55518006 . C . PASS END=55518011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 55518012 . A . PASS END=55518012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 55518013 . A . PASS END=55518026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1041:0,84,255:30,0 chr1 55518027 . C . PASS END=55518027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 55518028 . A . PASS END=55518055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1050:0,82,255:32,0 chr1 55518056 . A . PASS END=55518070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:31,0 chr1 55518071 . G . PASS END=55518085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,64,255:26,0 chr1 55518093 . G A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=2.564;FractionInformativeReads=0.960;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,15,0:0.625,0.000:24:3,5,0:6,10,0:47:85,0,47,528,322,850:255,0,255:8,0:5.0000e+01,8.9825e-05,4.9708e+01,4.5000e+02,3.5664e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,6,9:5,4,10,5 chr1 55518175 . G . PASS END=55518175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 55518190 . A . PASS END=55518190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:15,1 chr1 55518191 . C . PASS END=55518191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,663:0,22,255:15,1 chr1 55518287 . G A, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,21,0:0.583,0.000:36:7,15,0:8,6,0:47:85,0,48,691,528,1219:255,0,255:15,0:5.0000e+01,7.7400e-05,5.1068e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,14,7:6,9,14,7 chr1 55518314 . G . PASS END=55518314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 55518317 . G . PASS END=55518317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 55518323 . G . PASS END=55518324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 55518325 . C . PASS END=55518429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1305:0,94,255:40,0 chr1 55518430 . C . PASS END=55518443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1163:0,80,255:30,0 chr1 55518444 . C . PASS END=55518444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:26,0 chr1 55518445 . G . PASS END=55518454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1062:0,84,255:28,0 chr1 55518455 . A . PASS END=55518464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr1 55518472 . A . PASS END=55518472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 55521666 . G . PASS END=55521671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 55521672 . A . PASS END=55521672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 55521673 . G . PASS END=55521673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 55521674 . T . PASS END=55521674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:11,0 chr1 55521675 . T . PASS END=55521677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 55521678 . T . PASS END=55521678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 55521679 . T . PASS END=55521689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 55521690 . A . PASS END=55521709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 55521710 . C . PASS END=55521710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 55521711 . C . PASS END=55521718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 55521719 . G . PASS END=55521721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:22,0 chr1 55521722 . C . PASS END=55521722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 55521723 . T . PASS END=55521737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 55521738 . G . PASS END=55521748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 55521749 . C . PASS END=55521751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 55521752 . G . PASS END=55521753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55521754 . C . PASS END=55521761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55521762 . C . PASS END=55521765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55521766 . C . PASS END=55521770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 55521771 . A . PASS END=55521793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 55521794 . G . PASS END=55521794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 55521795 . T . PASS END=55521795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 55521796 . G . PASS END=55521800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 55521801 . T . PASS END=55521801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 55521802 . C . PASS END=55521803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:23:0,36,781:0,36,255:22,0 chr1 55521804 . C . PASS END=55521804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 55521805 . C . PASS END=55521805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 55521806 . G . PASS END=55521806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 55521807 . C . PASS END=55521811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 55521812 . G . PASS END=55521813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 55521814 . C . PASS END=55521814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 55521815 . A . PASS END=55521815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 55521816 . A . PASS END=55521817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,831:0,41,255:24,0 chr1 55521818 . T . PASS END=55521820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:24,0 chr1 55521821 . C . PASS END=55521821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 55521822 . G . PASS END=55521824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 55521825 . A . PASS END=55521825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,815:0,45,255:23,0 chr1 55521826 . C . PASS END=55521827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:24,0 chr1 55521828 . A . PASS END=55521828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:24,0 chr1 55521829 . T . PASS END=55521829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 55521830 . G . PASS END=55521831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:24,0 chr1 55521832 . C . PASS END=55521833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:24,0 chr1 55521834 . G . PASS END=55521835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:27:0,63,945:0,65,255:23,0 chr1 55521836 . C . PASS END=55521836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:23,0 chr1 55521837 . T . PASS END=55521839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:23,0 chr1 55521840 . A . PASS END=55521841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:22,0 chr1 55521842 . T . PASS END=55521850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,908:0,61,255:24,0 chr1 55521851 . T . PASS END=55521851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:24,0 chr1 55521852 . C . PASS END=55521852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 55521853 . A . PASS END=55521860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:45:27:0,45,675:0,48,255:16,0 chr1 55521861 . A . PASS END=55521861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:15,0 chr1 55521862 . G . PASS END=55521862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,675:0,54,255:15,0 chr1 55521869 . G . PASS END=55521869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:30:30:0,30,450:0,90,255:10,0 chr1 55521899 . GGGGCGGA G, 50.00 PASS DP=30;MQ=248.35;MQRankSum=3.940;ReadPosRankSum=0.000;FractionInformativeReads=0.733;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,11,0:0.500,0.000:22:8,4,0:3,7,0:46:80,0,45,180,180,180:255,0,179:3,23:5.0000e+01,1.1338e-04,4.7928e+01,1.8477e+02,2.1477e+02,1.8778e+02:0.00,30.00,33.01,34.77,64.77,37.78:9,2,7,4:8,3,8,3 chr1 55521905 . GA G, 47.93 PASS DP=29;MQ=248.30;MQRankSum=4.113;ReadPosRankSum=1.217;FractionInformativeReads=0.828;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,11,0:0.458,0.000:24:6,8,0:7,3,0:46:78,0,47,178,178,178:255,0,216:5,26:4.7928e+01,1.1338e-04,5.0000e+01,1.8270e+02,2.1270e+02,1.8571e+02:0.00,30.00,33.01,34.77,64.77,37.78:7,6,9,2:8,5,8,3:55521905 chr1 55521906 . A . LowGQ END=55521906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,34:37:0:37:0,0,0:255,0,5:0,26 chr1 55521907 . GGGCGGA G, 47.93 PASS DP=30;MQ=248.35;MQRankSum=4.318;ReadPosRankSum=1.999;FractionInformativeReads=0.900;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:16,11,0:0.407,0.000:27:7,8,0:9,3,0:46:78,0,47,178,178,178:255,0,255:26,1:4.7928e+01,1.1338e-04,5.0000e+01,1.8270e+02,2.1270e+02,1.8571e+02:0.00,30.00,33.01,34.77,64.77,37.78:9,7,9,2:10,6,8,3:55521905 chr1 55521913 . A . LowGQ END=55521913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,15:31:0:31:0,0,65:255,0,255:12,1 chr1 55521927 . G . PASS END=55521927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1213:0,105,255:35,0 chr1 55522992 . T . PASS END=55522992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 55523004 . G . PASS END=55523013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 55523014 . T . PASS END=55523014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 55523015 . T . PASS END=55523032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,202:6,0 chr1 55523033 . A G, 65.19 PASS DP=6;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,6,0:1.000,0.000:6:0,4,0:0,2,0:15:103,18,0,232,18,232:210,18,0:0,0:6.5192e+01,1.5192e+01,1.3348e-01,2.2904e+02,4.9962e+01,2.3204e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,3:0,0,3,3 chr1 55523034 . G . PASS END=55523038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 55523039 . G . PASS END=55523043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 55523044 . T . PASS END=55523054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 55523055 . A . PASS END=55523070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,235:8,0 chr1 55523071 . T . PASS END=55523076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 55523077 . G . PASS END=55523077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 55523078 . C . PASS END=55523078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 55523079 . T . PASS END=55523080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 55523081 . T . PASS END=55523081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 55523082 . G . PASS END=55523086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 55523087 . C . PASS END=55523087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 55523088 . C . PASS END=55523088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 55523089 . T . PASS END=55523100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:6,0 chr1 55523101 . G . PASS END=55523141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 55523142 . T . PASS END=55523142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,182:0,10,182:8,0 chr1 55523143 . T . PASS END=55523145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 55523146 . T . PASS END=55523146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 55523147 . G . PASS END=55523155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 55523156 . T . PASS END=55523188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 55523656 . T . PASS END=55523656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 55523670 . C . PASS END=55523670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 55523709 . G . PASS END=55523725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1286:0,92,255:35,0 chr1 55523726 . C . PASS END=55523727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:34:0,69,1185:0,69,255:32,0 chr1 55523728 . G . PASS END=55523737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:33,0 chr1 55523738 . C . PASS END=55523738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:31,0 chr1 55523739 . C . PASS END=55523773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:34,0 chr1 55523774 . A . PASS END=55523778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr1 55523779 . C . PASS END=55523780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 55523781 . T . PASS END=55523781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 55523782 . C . PASS END=55523783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 55523784 . C . PASS END=55523784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 55523785 . T . PASS END=55523804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:29,0 chr1 55523805 . A . PASS END=55523805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 55523806 . G . PASS END=55523813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 55523814 . T . PASS END=55523821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1016:0,71,255:26,0 chr1 55523822 . G . PASS END=55523827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 55523828 . C . PASS END=55523835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:22,0 chr1 55523836 . G . PASS END=55523859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr1 55523860 . G . PASS END=55523870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,504:0,31,255:13,0 chr1 55523871 . C . PASS END=55523872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 55523873 . C . PASS END=55523873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 55523874 . A . PASS END=55523874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr1 55523875 . T . PASS END=55523882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 55523891 . G . PASS END=55523891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 55524172 . G . PASS END=55524184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 55524185 . T . PASS END=55524196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:16,0 chr1 55524197 . A G, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,3,0:0,14,0:48:136,51,0,651,51,651:255,51,0:0,0:9.8162e+01,4.8162e+01,6.6269e-05,4.5000e+02,8.2932e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,4:0,0,7,10 chr1 55524198 . T . PASS END=55524198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 55524199 . G . PASS END=55524236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:21:0,61,762:0,61,255:26,0 chr1 55524237 . G A, 124.79 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,9,0:0,17,0:75:163,78,0,962,78,962:255,78,0:0,0:1.2479e+02,7.4789e+01,2.5886e-07,4.5000e+02,1.0956e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,7:0,0,10,16 chr1 55524238 . T . PASS END=55524252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 55524253 . C . PASS END=55524253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 55524254 . A . PASS END=55524265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,756:0,69,255:23,0 chr1 55524266 . G . PASS END=55524266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr1 55524267 . C . PASS END=55524269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 55524270 . A . PASS END=55524270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 55524271 . G . PASS END=55524274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 55524275 . C . PASS END=55524279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 55524280 . G . PASS END=55524280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 55524281 . T . PASS END=55524281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 55524282 . T . PASS END=55524282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 55524283 . T . PASS END=55524292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,784:0,66,255:22,0 chr1 55524293 . T . PASS END=55524296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 55524297 . A . PASS END=55524297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:18,0 chr1 55524298 . A . PASS END=55524303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 55524304 . G . PASS END=55524304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 55524305 . G . PASS END=55524309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 55524310 . A . PASS END=55524310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 55524311 . G . PASS END=55524314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 55524315 . A . PASS END=55524320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,713:0,47,255:19,0 chr1 55524324 . A . PASS END=55524324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:15,0 chr1 55525159 . G . PASS END=55525172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 55525173 . G . PASS END=55525173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 55525174 . C . PASS END=55525184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 55525185 . G . PASS END=55525185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 55525186 . G . PASS END=55525203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr1 55525204 . G . PASS END=55525210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 55525211 . G . PASS END=55525212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55525213 . G . PASS END=55525227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 55525228 . A . PASS END=55525239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:22:0,56,855:0,56,255:19,0 chr1 55525240 . C . PASS END=55525241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 55525242 . A . PASS END=55525242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 55525243 . C . PASS END=55525246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 55525247 . A . PASS END=55525247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 55525248 . G . PASS END=55525249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 55525250 . C . PASS END=55525250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 55525251 . C . PASS END=55525257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr1 55525258 . A . PASS END=55525258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 55525259 . G . PASS END=55525277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,792:0,63,255:24,0 chr1 55525278 . A . PASS END=55525278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 55525279 . G . PASS END=55525336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,963:0,72,255:26,0 chr1 55525375 . C . PASS END=55525375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55525386 . T . PASS END=55525386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 55526938 . G . PASS END=55526951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 55526952 . G . PASS END=55526952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 55526953 . C . PASS END=55526953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 55526954 . C . PASS END=55526982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1111:0,82,255:33,0 chr1 55526983 . G . PASS END=55526983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 55526984 . G . PASS END=55527026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1079:0,80,255:32,0 chr1 55527048 . G . PASS END=55527079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:33,0 chr1 55527080 . G . PASS END=55527083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 55527084 . C . PASS END=55527126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:33,0 chr1 55527127 . G . PASS END=55527134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 55527135 . G . PASS END=55527137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55527138 . A . PASS END=55527138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 55527139 . C . PASS END=55527141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55527142 . G . PASS END=55527142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 55527143 . G . PASS END=55527145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 55527146 . G . PASS END=55527146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55527147 . C . PASS END=55527147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55527148 . C . PASS END=55527155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 55527156 . A . PASS END=55527159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 55527160 . T . PASS END=55527160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 55527161 . T . PASS END=55527169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 55527170 . C . PASS END=55527199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:25,0 chr1 55527200 . G . PASS END=55527226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 55527227 . C . PASS END=55527228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 55527229 . G . PASS END=55527230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 55527235 . G . PASS END=55527235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 55529029 . C . PASS END=55529029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55529042 . G . PASS END=55529045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 55529046 . C . PASS END=55529082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:23,0 chr1 55529083 . C . PASS END=55529083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 55529084 . A . PASS END=55529114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,65,255:25,0 chr1 55529115 . G . PASS END=55529115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr1 55529116 . G . PASS END=55529149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,65,255:26,0 chr1 55529150 . A . PASS END=55529156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 55529157 . A . PASS END=55529157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 55529158 . C . PASS END=55529158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 55529159 . G . PASS END=55529186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:25,0 chr1 55529187 . G A, 127.80 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,12,0:0,15,0:78:166,81,0,1003,81,1003:255,81,0:0,0:1.2780e+02,7.7798e+01,0.0000e+00,4.5000e+02,1.1257e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,18:0,0,16,11 chr1 55529188 . G . PASS END=55529196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr1 55529197 . A . PASS END=55529198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 55529199 . C . PASS END=55529204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 55529205 . C . PASS END=55529205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:23,0 chr1 55529206 . C . PASS END=55529216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr1 55529217 . G . PASS END=55529217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 55529218 . G . PASS END=55529224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 55529225 . C . PASS END=55529237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,892:0,72,255:24,0 chr1 55529238 . C . PASS END=55529257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 55529315 . A . PASS END=55529315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 55529332 . C . PASS END=55529332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 55529335 . C . PASS END=55529335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 55529347 . C . PASS END=55529347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 55529379 . C . PASS END=55529379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 55529409 . G . PASS END=55529409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 55529428 . C . PASS END=55529428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 55529436 . T . PASS END=55529436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 55529464 . G . PASS END=55529464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 55529531 . C . PASS END=55529531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 55529533 . C . PASS END=55529533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 55529625 . G . PASS END=55529625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 55529661 . G . PASS END=55529661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 55529683 . C . PASS END=55529683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 55529721 . C . PASS END=55529721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 55529727 . G . PASS END=55529727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 55529745 . C . PASS END=55529745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 55529766 . C . PASS END=55529766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 55529805 . T . PASS END=55529805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 55529923 . G . PASS END=55529923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 55530016 . G . PASS END=55530016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 55530042 . C . PASS END=55530042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 55530060 . G . PASS END=55530060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 55530103 . G . PASS END=55530103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 55530144 . C . PASS END=55530144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 55530207 . C . PASS END=55530207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 55530309 . C . PASS END=55530309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 55530342 . G . PASS END=55530342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 55530350 . C . PASS END=55530350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 55530407 . C . PASS END=55530407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 55530411 . C . PASS END=55530411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1504:0,107,255:40,0 chr1 55530425 . C . PASS END=55530425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,105,1575:0,109,255:34,0 chr1 55530486 . G . PASS END=55530486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:28,0 chr1 55534718 . C . PASS END=55534780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,99,1485:0,108,255:40,0 chr1 55537107 . T . PASS END=55537113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,959:0,87,255:30,0 chr1 55537114 . T . PASS END=55537114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 55537115 . C . PASS END=55537163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:33,0 chr1 55537487 . C . PASS END=55537597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,120,1800:0,144,255:40,0 chr1 55537990 . C . PASS END=55538076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:44:0,114,1621:0,119,255:40,0 chr1 55538459 . C . PASS END=55538463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 55538464 . T . PASS END=55538464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 55538465 . C . PASS END=55538469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1192:0,83,255:33,0 chr1 55538470 . G . PASS END=55538470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:32,0 chr1 55538471 . C . PASS END=55538471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 55538472 . C . PASS END=55538473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 55538474 . C . PASS END=55538514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1425:0,90,255:40,0 chr1 55538515 . A . PASS END=55538534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1305:0,101,255:37,0 chr1 55539501 . T . PASS END=55539579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:34:0,89,1294:0,89,255:40,0 chr1 55539586 . G . PASS END=55539586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 55541130 . C . PASS END=55541136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,220,255:40,0 chr1 55541137 . T . PASS END=55541173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,188,255:40,0 chr1 55541174 . A G, 284.76 PASS DP=79;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,79,0:1.000,0.000:79:0,42,0:0,37,0:235:323,238,0,3047,238,3047:255,238,0:0,0:2.8476e+02,2.3476e+02,0.0000e+00,4.5000e+02,2.6953e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,46:0,0,40,39 chr1 55541175 . C . PASS END=55541196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:57:0,120,1800:0,144,255:40,0 chr1 55542908 . C . PASS END=55542961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,153,255:40,0 chr1 55542962 . T . PASS END=55542962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,10:77:42:77:0,42,2014:0,42,255:40,0 chr1 55542963 . T . PASS END=55542973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,176,255:40,0 chr1 55544211 . C . PASS END=55544235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1372:0,98,255:37,0 chr1 55544236 . G . PASS END=55544236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,1 chr1 55544237 . A . PASS END=55544237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:39:0,82,1356:0,82,255:37,1 chr1 55544238 . A . PASS END=55544238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr1 55544239 . A . PASS END=55544324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,99,1441:0,104,255:40,0 chr1 55545211 . C . PASS END=55545332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1124:0,80,255:40,0 chr1 55546995 . C . PASS END=55547097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,131,255:40,0 chr1 55548945 . C . PASS END=55549037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:32:0,89,1250:0,89,255:40,0 chr1 55549445 . C . PASS END=55549561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:38:0,94,1365:0,94,255:40,1 chr1 55551615 . C . PASS END=55551711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,102,1543:0,102,255:40,0 chr1 55555300 . T . PASS END=55555322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,156,255:40,0 chr1 55555323 . A . PASS END=55555413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,191,255:40,0 chr1 55557696 . C . PASS END=55557799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,112,1507:0,112,255:40,0 chr1 55558494 . A . PASS END=55558589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:50:0,120,1800:0,137,255:40,0 chr1 55559610 . C . PASS END=55559612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 55559613 . G . PASS END=55559760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1088:0,90,255:40,0 chr1 55560928 . A . PASS END=55561056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:37:0,81,1215:0,96,255:40,0 chr1 55561057 . G . PASS END=55561064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:63:36:0,63,945:0,103,255:25,0 chr1 55561065 . G . PASS END=55561069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,70,255:19,0 chr1 55562171 . T . PASS END=55562295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:50:0,120,1800:0,120,255:40,0 chr1 55562625 . C . PASS END=55562641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:16,0 chr1 55562642 . G . PASS END=55562642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 55562643 . G . PASS END=55562645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 55562646 . T . PASS END=55562646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 55562647 . A . PASS END=55562653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,837:0,69,255:25,0 chr1 55562654 . G . PASS END=55562664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1202:0,87,255:32,0 chr1 55562665 . C . PASS END=55562665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:32,0 chr1 55562666 . C . PASS END=55562834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:33:0,84,1263:0,84,255:40,0 chr1 55562835 . A . PASS END=55562835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1296:0,67,255:33,0 chr1 55562836 . T . PASS END=55562845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1294:0,92,255:35,0 chr1 55563271 . C . PASS END=55563390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:80:48:0,80,1406:0,80,255:40,0 chr1 55563616 . C . PASS END=55563757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:95:41:0,95,1466:0,95,255:40,0 chr1 55564149 . C . PASS END=55564231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,140,255:40,0 chr1 55565444 . C . PASS END=55565542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,152,255:40,0 chr1 55566512 . C . PASS END=55566637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:98:50:0,98,1678:0,98,255:40,0 chr1 55567257 . C . PASS END=55567259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:26,0 chr1 55567260 . A . PASS END=55567261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 55567262 . G . PASS END=55567262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55567263 . G . PASS END=55567372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1215:0,84,255:40,0 chr1 55567373 . G . PASS END=55567376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1336:0,100,255:39,0 chr1 55569549 . A . PASS END=55569550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 55569551 . C . PASS END=55569551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 55569552 . A . PASS END=55569681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:31:0,80,925:0,80,255:40,0 chr1 55569682 . G . PASS END=55569693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:69:36:0,69,1035:0,108,255:26,0 chr1 55571185 . T . PASS END=55571194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:86:0,120,1800:0,226,255:40,0 chr1 55571788 . C . PASS END=55571936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:50:0,102,1530:0,138,255:40,0 chr1 55572912 . C . PASS END=55572913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1090:0,93,255:31,0 chr1 55572914 . A . PASS END=55572914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr1 55572915 . G . PASS END=55572925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1178:0,96,255:32,0 chr1 55572926 . T . PASS END=55572926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1117:0,60,255:31,0 chr1 55572927 . C . PASS END=55573077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:33:0,81,1215:0,83,255:40,0 chr1 55573078 . G . PASS END=55573103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:25,0 chr1 55575858 . T . PASS END=55575919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:59:0,120,1800:0,160,255:40,0 chr1 55586269 . C . PASS END=55586278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,47,255:19,0 chr1 55586279 . C . PASS END=55586290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,738:0,60,255:23,0 chr1 55586291 . T . PASS END=55586292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 55586293 . C . PASS END=55586293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 55586294 . T . PASS END=55586295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 55586296 . G . PASS END=55586321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,811:0,61,255:26,0 chr1 55586322 . C . PASS END=55586367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1089:0,80,255:32,0 chr1 55586368 . G . PASS END=55586371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 55586372 . G . PASS END=55586372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 55586373 . C . PASS END=55586383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 55586384 . C . PASS END=55586387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 55586388 . C . PASS END=55586394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 55586395 . A . PASS END=55586395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 55586396 . G . PASS END=55586409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr1 55586410 . T . PASS END=55586417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr1 55586418 . A . PASS END=55586425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 55586426 . G . PASS END=55586426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 55586427 . A . PASS END=55586429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 55587109 . C . PASS END=55587179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:64:0,120,1800:0,162,255:40,0 chr1 55589120 . C . PASS END=55589231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1164:0,85,255:40,0 chr1 55589232 . C . PASS END=55589234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:24,0 chr1 55589235 . G . PASS END=55589260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,609:0,44,255:19,0 chr1 55589261 . A . PASS END=55589261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr1 55589262 . G . PASS END=55589275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 55590142 . C . PASS END=55590145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 55590146 . A . PASS END=55590282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1047:0,84,255:40,0 chr1 55590283 . A . PASS END=55590283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:31,0 chr1 55590284 . A . PASS END=55590301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1170:0,83,255:33,0 chr1 55590460 . T . PASS END=55590477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:64:0,120,1800:0,168,255:40,0 chr1 55590993 . T . PASS END=55591188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,83,255:40,0 chr1 55591189 . A . PASS END=55591202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 55591203 . T . PASS END=55591211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1070:0,84,255:28,0 chr1 55591212 . A . PASS END=55591221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,960:0,68,255:25,0 chr1 55591336 . C . PASS END=55591431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:42:0,87,1466:0,87,255:40,0 chr1 55595150 . C . PASS END=55595154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1219:0,88,255:36,0 chr1 55595155 . A . PASS END=55595155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,947:0,74,255:34,0 chr1 55595156 . C . PASS END=55595247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1147:0,91,255:40,0 chr1 55598218 . T . PASS END=55598223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,868:0,69,255:25,0 chr1 55598224 . G . PASS END=55598373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1116:0,87,255:40,0 chr1 55599743 . C . PASS END=55599836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:73:0,120,1800:0,212,255:40,0 chr1 55600001 . C . PASS END=55600086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1215:0,105,255:40,0 chr1 55603188 . C . PASS END=55603361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,112,1776:0,112,255:40,0 chr1 55603479 . C . PASS END=55603577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:66:0,120,1800:0,162,255:40,0 chr1 55604281 . C . PASS END=55604286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1095:0,82,255:36,0 chr1 55604287 . A . PASS END=55604287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:34,0 chr1 55604288 . G . PASS END=55604391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:85:39:0,85,1400:0,85,255:40,0 chr1 55604617 . C . PASS END=55604622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:80:0,120,1800:0,196,255:40,0 chr1 55604623 . A . PASS END=55604623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,10:82:43:82:0,43,2058:0,43,255:40,0 chr1 55604624 . G . PASS END=55604647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:82:0,120,1800:0,203,255:40,0 chr1 55604648 . A . PASS END=55604683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,3:78:99:72:0,120,1800:0,139,255:40,0 chr1 55607289 . C . PASS END=55607289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 55607290 . T . PASS END=55607290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 55607291 . A . PASS END=55607291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 55607292 . T . PASS END=55607292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 55607293 . A . PASS END=55607392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:30:0,87,1048:0,90,255:40,0 chr1 55607393 . T . PASS END=55607393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:28,0 chr1 55607394 . G . PASS END=55607403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr1 55607404 . C . PASS END=55607404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 55608415 . T . PASS END=55608468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,176,255:40,0 chr1 55608652 . C . PASS END=55608792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:62:0,120,1800:0,179,255:40,0 chr1 55609800 . C . PASS END=55609876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:94:0,120,1800:0,237,255:40,2 chr1 55611671 . C . PASS END=55611782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:95:37:0,95,1341:0,95,255:40,0 chr1 55612602 . C . PASS END=55612733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,99,1485:0,124,255:40,0 chr1 55613322 . C . PASS END=55613325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 55613326 . C . PASS END=55613326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 55613327 . G . PASS END=55613327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55613328 . G . PASS END=55613328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 55613329 . T . PASS END=55613329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 55613330 . A . PASS END=55613330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 55613331 . A . PASS END=55613471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:29:0,81,1215:0,87,255:40,0 chr1 55614136 . C . PASS END=55614243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:35:0,84,1260:0,105,255:40,0 chr1 55617585 . C . PASS END=55617648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,152,255:40,0 chr1 55619543 . C . PASS END=55619590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,147,255:40,0 chr1 55619792 . C . PASS END=55619793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:29,0 chr1 55619794 . T . PASS END=55619812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1264:0,92,255:39,0 chr1 55619813 . C . PASS END=55619813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr1 55619814 . T . PASS END=55619953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:39:0,84,1220:0,84,255:40,0 chr1 55620044 . C . PASS END=55620139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,152,255:40,0 chr1 55620344 . C . PASS END=55620451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:56:0,120,1800:0,135,255:40,0 chr1 55622621 . C . PASS END=55622724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:74:0,120,1800:0,218,255:40,0 chr1 55622929 . C . PASS END=55623043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:59:0,120,1800:0,154,255:40,0 chr1 55624551 . T . PASS END=55624559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:25,0 chr1 55624560 . A . PASS END=55624560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,777:0,58,255:24,0 chr1 55624561 . G . PASS END=55624562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,810:0,78,255:26,0 chr1 55624563 . A . PASS END=55624571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:31,0 chr1 55624572 . A . PASS END=55624572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 55624573 . G . PASS END=55624590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1126:0,96,255:34,0 chr1 55624591 . T . PASS END=55624591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1229:0,69,255:33,0 chr1 55624592 . T . PASS END=55624709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:87:36:0,87,1308:0,87,255:40,0 chr1 55625284 . C . PASS END=55625358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:90:43:0,90,1350:0,109,255:40,0 chr1 55627872 . C . PASS END=55627933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:34:0,81,1215:0,81,255:38,0 chr1 55627934 . C . PASS END=55627937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 55631558 . C . PASS END=55631623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:50:0,120,1800:0,123,255:40,0 chr1 55632241 . C . PASS END=55632276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:74:0,120,1800:0,189,255:40,0 chr1 55637229 . C . PASS END=55637351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:57:0,120,1800:0,155,255:40,0 chr1 55638050 . C . PASS END=55638074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,120,1800:0,135,255:40,0 chr1 55638075 . G A, 262.30 PASS DP=72;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,43,0:0,29,0:212:300,215,0,2664,215,2664:255,216,0:0,0:2.6230e+02,2.1230e+02,0.0000e+00,4.5000e+02,2.4707e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,42,30:0,0,47,25 chr1 55638076 . T . PASS END=55638112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,200,255:40,0 chr1 55638113 . T . PASS END=55638193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:94:52:0,94,1800:0,94,255:40,0 chr1 55642049 . C . PASS END=55642116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:65:0,120,1800:0,159,255:40,0 chr1 55643640 . C . PASS END=55643792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:38:0,81,1196:0,94,255:40,0 chr1 55643793 . T . PASS END=55643796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:60:42:0,60,900:0,126,255:25,0 chr1 55643797 . A . PASS END=55643805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:45:38:0,45,675:0,97,255:18,0 chr1 55680463 . C . PASS END=55680463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 55680464 . T . PASS END=55680465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 55680466 . C . PASS END=55680512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 55680513 . C . PASS END=55680549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:6,0 chr1 55680550 . G . PASS END=55680552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,178:3,0 chr1 55680553 . G . PASS END=55680559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,227:5,0 chr1 55680560 . C . PASS END=55680560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 55680561 . C . PASS END=55680567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 55680568 . G . PASS END=55680569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:7,0 chr1 55680570 . C . PASS END=55680574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr1 55680575 . C . PASS END=55680575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 55680576 . G . PASS END=55680584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 55680585 . C . PASS END=55680602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 55680603 . G . PASS END=55680611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 55680612 . C . PASS END=55680612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 55680613 . G . PASS END=55680614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 55680615 . T . PASS END=55680615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 55680616 . G . PASS END=55680646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 55680647 . C . PASS END=55680647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 55680648 . C . PASS END=55680658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 55680659 . T . PASS END=55680668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr1 55680669 . G . PASS END=55680673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 55680674 . A . PASS END=55680674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 55680675 . C . PASS END=55680700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,368:0,36,255:12,0 chr1 55680701 . A . PASS END=55680702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 55680703 . G . PASS END=55680718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 55680719 . A . PASS END=55680719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 55680720 . T . PASS END=55680720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 55680721 . G . PASS END=55680760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 55680761 . A . PASS END=55680786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 56949030 . T . PASS END=56949126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:33:0,92,1227:0,92,255:40,0 chr1 56962223 . C . PASS END=56962348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:34:0,89,1241:0,89,255:40,0 chr1 56977648 . T . PASS END=56977648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 56977649 . A . PASS END=56977649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 56977650 . T . PASS END=56977656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 56977657 . G . PASS END=56977657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 56977658 . G . PASS END=56977658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 56977659 . C . PASS END=56977664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 56977665 . G . PASS END=56977665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 56977666 . G . PASS END=56977678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,856:0,66,255:24,0 chr1 56977679 . A . PASS END=56977679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 56977680 . A . PASS END=56977685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:24,0 chr1 56977686 . C . PASS END=56977686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:22,0 chr1 56977687 . C . PASS END=56977699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,954:0,72,255:26,0 chr1 56977700 . G . PASS END=56977701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 56977702 . A . PASS END=56977712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 56977713 . G . PASS END=56977726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr1 56977727 . G . PASS END=56977727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 56977728 . A . PASS END=56977733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 56977734 . C . PASS END=56977776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:23:0,61,878:0,61,255:26,0 chr1 56977777 . C . PASS END=56977807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,521:0,45,255:19,0 chr1 56977808 . C . PASS END=56977815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 56977816 . C . PASS END=56977824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 56989495 . C . PASS END=56989506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1073:0,90,255:34,0 chr1 56989507 . C . PASS END=56989507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 56989508 . A . PASS END=56989526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,104,1291:0,104,255:39,0 chr1 56989527 . A . PASS END=56989527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:37,0 chr1 56989528 . G . PASS END=56989552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1224:0,87,255:39,0 chr1 56989949 . C . PASS END=56989961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 56989962 . C . PASS END=56989962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:24,0 chr1 56989963 . T . PASS END=56989974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,870:0,62,255:26,0 chr1 56989975 . A . PASS END=56989975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr1 56989976 . C . PASS END=56989976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 56989977 . C . PASS END=56989977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,999:0,71,255:27,0 chr1 56989978 . T . PASS END=56989982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 56989983 . A . PASS END=56989983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 56989984 . T . PASS END=56989986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 56989987 . G . PASS END=56989987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 56989988 . T . PASS END=56989993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 56989994 . T . PASS END=56989994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 56989995 . G . PASS END=56990015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:31,0 chr1 56990016 . T . PASS END=56990016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 56990017 . G . PASS END=56990042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1127:0,93,255:31,0 chr1 56990043 . C . PASS END=56990044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 56990045 . C . PASS END=56990045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 56990046 . T . PASS END=56990046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 56990047 . C . PASS END=56990062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 56990063 . A . PASS END=56990063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 56990064 . G . PASS END=56990067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1192:0,83,255:29,0 chr1 56990068 . C . PASS END=56990076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 56990077 . C . PASS END=56990077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:24,0 chr1 56990078 . A . PASS END=56990078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 56990079 . C . PASS END=56990080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 56990081 . T . PASS END=56990081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 56990082 . T . PASS END=56990082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 56990083 . G . PASS END=56990088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 56990089 . G . PASS END=56990089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 56990090 . T . PASS END=56990090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 56990091 . C . PASS END=56990158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1106:0,80,255:35,0 chr1 56990159 . T . PASS END=56990160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1194:0,66,255:34,0 chr1 56990161 . G . PASS END=56990187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:31:0,89,976:0,89,255:35,0 chr1 56990188 . C . PASS END=56990188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 56990189 . T . PASS END=56990191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1164:0,93,255:31,0 chr1 56990192 . A . PASS END=56990192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 56990193 . G . PASS END=56990193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 56990194 . G . PASS END=56990194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 56990195 . T . PASS END=56990196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 56990197 . A . PASS END=56990221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr1 56990222 . A . PASS END=56990222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:22,0 chr1 56990223 . T . PASS END=56990224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 56990225 . A . PASS END=56990225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 56990226 . T . PASS END=56990226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 57002627 . C . PASS END=57002650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1293:0,92,255:40,0 chr1 57002651 . C . PASS END=57002784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:38:0,98,1357:0,98,255:40,0 chr1 57044551 . C . PASS END=57044559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 57044560 . G . PASS END=57044560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 57044561 . G . PASS END=57044575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 57044576 . G . PASS END=57044576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 57044577 . C . PASS END=57044636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,870:0,66,255:24,0 chr1 57044637 . C . PASS END=57044637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 57044638 . C . PASS END=57044657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 57044658 . A . PASS END=57044658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,593:0,32,255:18,0 chr1 57044659 . C . PASS END=57044660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 57044661 . A . PASS END=57044663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 57044664 . G . PASS END=57044664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 57044665 . C . PASS END=57044684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 57044685 . T . PASS END=57044685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:16,0 chr1 57044686 . G . PASS END=57044687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 57044688 . A . PASS END=57044689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:10,0 chr1 57111061 . A . PASS END=57111087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,507:0,48,255:18,0 chr1 57111088 . C . PASS END=57111098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr1 57111099 . C . PASS END=57111102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 57111103 . C . PASS END=57111103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 57111104 . A . PASS END=57111113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 57111114 . G . PASS END=57111126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 57111127 . G . PASS END=57111127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 57111128 . G . PASS END=57111131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 57111132 . C . PASS END=57111133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 57111134 . G . PASS END=57111134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 57111135 . C . PASS END=57111136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 57111137 . C . PASS END=57111137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 57111138 . C . PASS END=57111142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 57111143 . G . PASS END=57111145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 57111146 . A . PASS END=57111154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 57137114 . T . PASS END=57137120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:117:0,120,1800:0,255,255:40,0 chr1 57140054 . T . PASS END=57140195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:62:0,120,1800:0,170,255:40,0 chr1 57157067 . A . PASS END=57157160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:66:0,120,1800:0,168,255:40,2 chr1 57158031 . G . PASS END=57158165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1124:0,85,255:40,0 chr1 57158166 . G . PASS END=57158166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 57158167 . C . PASS END=57158169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 57158170 . A . PASS END=57158175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 57159438 . G . PASS END=57159525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,104,1449:0,104,255:40,0 chr1 57161608 . A . PASS END=57161821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:34:0,85,1148:0,85,255:40,0 chr1 57161822 . A . PASS END=57161822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 57161823 . A . PASS END=57161823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 57161824 . A . PASS END=57161830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:33:0,63,1170:0,63,255:26,0 chr1 57161831 . A . PASS END=57161832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr1 57169644 . A . PASS END=57170133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:85:35:0,85,1440:0,85,255:40,0 chr1 57170134 . G . PASS END=57170134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1263:0,75,255:31,0 chr1 57170135 . A . PASS END=57170148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1235:0,102,255:34,0 chr1 57171765 . G . PASS END=57171891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:61:0,120,1800:0,155,255:40,0 chr1 57173148 . A . PASS END=57173386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1215:0,90,255:40,0 chr1 57185344 . C . PASS END=57185365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:86:0,120,1800:0,225,255:40,0 chr1 57185695 . T . PASS END=57185728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:86:0,120,1800:0,221,255:40,0 chr1 57185846 . A . PASS END=57185855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,151,255:40,0 chr1 57185856 . A . PASS END=57186002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:51:0,120,1768:0,120,255:40,0 chr1 57189261 . C . PASS END=57189354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:80:0,120,1800:0,150,255:40,0 chr1 57192170 . C . PASS END=57192256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:100:0,120,1800:0,250,255:40,3 chr1 57197565 . C . PASS END=57197640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,148,255:40,1 chr1 57202760 . T . PASS END=57202820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,182,255:40,0 chr1 57204298 . C . PASS END=57204326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,1:132:99:128:0,120,1800:0,255,255:40,0 chr1 57206370 . C . PASS END=57206468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:95:0,120,1800:0,255,255:40,0 chr1 57207834 . T . PASS END=57207894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:74:0,120,1800:0,212,255:40,0 chr1 57209699 . C . PASS END=57209739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,126,255:40,0 chr1 57209825 . A . PASS END=57209939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,87,255:40,0 chr1 57216717 . A . PASS END=57216719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 57216720 . G . PASS END=57216876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:31:0,84,1260:0,88,255:40,1 chr1 57219512 . C . PASS END=57219588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:91:0,120,1800:0,207,255:40,1 chr1 57219589 . T . PASS END=57219608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:101:0,120,1800:0,246,255:40,0 chr1 57221569 . C . PASS END=57221596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:63:0,120,1800:0,153,255:40,0 chr1 57221597 . C . PASS END=57221600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,163,255:40,0 chr1 57224389 . C . PASS END=57224422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:95:0,120,1800:0,255,255:40,0 chr1 57224423 . G . PASS END=57224423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:102:0,120,1800:0,255,255:40,0 chr1 57227525 . C . PASS END=57227555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,2:94:99:91:0,120,1800:0,218,255:40,0 chr1 57233502 . G . PASS END=57233611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:43:0,116,1612:0,116,255:40,0 chr1 57239097 . C . PASS END=57239125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:79:0,120,1800:0,194,255:40,0 chr1 57252848 . C . PASS END=57252881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,179,255:40,0 chr1 57254646 . C . PASS END=57254807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:83:45:0,83,1521:0,83,255:40,0 chr1 57257729 . C . PASS END=57257729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 57257730 . T . PASS END=57257730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 57257731 . G . PASS END=57257731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 57257732 . G . PASS END=57257733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 57257734 . G . PASS END=57257734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 57257735 . C . PASS END=57257743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,768:0,66,255:22,0 chr1 57257744 . C . PASS END=57257744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 57257745 . A . PASS END=57257757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:22:0,62,829:0,62,255:26,0 chr1 57257758 . T . PASS END=57257758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 57257759 . A . PASS END=57257759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 57257760 . G . PASS END=57257764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:30,0 chr1 57257765 . G . PASS END=57257765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 57257766 . C . PASS END=57257775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 57257776 . C . PASS END=57257776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 57257777 . T . PASS END=57257782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 57257783 . C . PASS END=57257783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr1 57257784 . C . PASS END=57257787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 57257788 . C . PASS END=57257789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 57257790 . C . PASS END=57257800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,986:0,81,255:27,0 chr1 57257801 . G . PASS END=57257801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 57257802 . T . PASS END=57257804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr1 57257805 . G . PASS END=57257806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 57257807 . T . PASS END=57257807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 57257808 . T . PASS END=57257809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 57257810 . C . PASS END=57257810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 57257811 . C . PASS END=57257811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 57257812 . C . PASS END=57258476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:30:0,86,1139:0,86,255:40,0 chr1 57284955 . C . PASS END=57284963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:32,0 chr1 57320575 . A . PASS END=57320651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,137,255:40,0 chr1 57333282 . G . PASS END=57333375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:32:0,90,1242:0,91,255:40,0 chr1 57340622 . T . PASS END=57340689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,109,1369:0,109,255:40,0 chr1 57340690 . T . PASS END=57340726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,105,1693:0,105,255:40,0 chr1 57340727 . C A, 40.35 PASS DP=48;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=0.995;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,16,0:0.333,0.000:48:17,9,0:15,7,0:40:75,0,50,572,1098,1671:255,0,255:28,0:4.0349e+01,4.2248e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,24,6,10:15,17,5,11 chr1 57340728 . A . PASS END=57340756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1210:0,86,255:39,0 chr1 57340757 . A . PASS END=57340764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:26,0 chr1 57340765 . A . PASS END=57340766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:23,0 chr1 57341735 . G . PASS END=57341752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:26,0 chr1 57341753 . A . PASS END=57341882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1025:0,84,255:40,0 chr1 57347118 . G . PASS END=57347139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,892:0,72,255:26,0 chr1 57347140 . G . PASS END=57347307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1215:0,84,255:40,0 chr1 57349154 . G . PASS END=57349155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:30,0 chr1 57349156 . C . PASS END=57349156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 57349157 . C . PASS END=57349191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1050:0,81,255:37,0 chr1 57349192 . T . PASS END=57349295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1157:0,81,255:40,0 chr1 57349296 . G . PASS END=57349296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 57349297 . T . PASS END=57349297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:43:0,81,1215:0,129,255:27,0 chr1 57349298 . G . PASS END=57349354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,848:0,61,255:26,0 chr1 57351588 . G . PASS END=57351588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 57351600 . A . PASS END=57351616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,893:0,62,255:26,0 chr1 57351617 . A . PASS END=57351620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,83,255:28,0 chr1 57351621 . T . PASS END=57351621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 57351622 . T . PASS END=57351840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,1088:0,90,255:40,0 chr1 57358311 . G . PASS END=57358342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:81:0,120,1800:0,210,255:40,0 chr1 57359771 . T . PASS END=57359820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:73:0,120,1800:0,187,255:40,0 chr1 57372340 . G . PASS END=57372465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,116,1800:0,116,255:40,0 chr1 57373629 . A . PASS END=57373761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:30:0,81,1096:0,90,255:40,0 chr1 57373762 . T . PASS END=57373776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:23,0 chr1 57373777 . C . PASS END=57373778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 57373779 . A . PASS END=57373780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 57373781 . T . PASS END=57373786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,52,255:15,0 chr1 57378076 . A . PASS END=57378104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 57378105 . C . PASS END=57378108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 57378109 . A . PASS END=57378132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 57378133 . C . PASS END=57378146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:19,0 chr1 57378147 . C . PASS END=57378153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 57378154 . T . PASS END=57378161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 57378162 . G . PASS END=57378167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 57378168 . G . PASS END=57378173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 57378174 . A . PASS END=57378181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 57378182 . C . PASS END=57378182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 57378183 . C . PASS END=57378213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,869:0,62,255:26,0 chr1 57378214 . G . PASS END=57378233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 57378234 . C . PASS END=57378234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 57378235 . A . PASS END=57378268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1064:0,87,255:30,0 chr1 57378269 . G . PASS END=57378269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 57378270 . T . PASS END=57378270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 57378271 . G . PASS END=57378271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 57378272 . C . PASS END=57378277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 57378278 . G . PASS END=57378288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,83,255:26,0 chr1 57378289 . C . PASS END=57378290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 57378291 . G . PASS END=57378291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 57378292 . A . PASS END=57378293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 57378294 . A . PASS END=57378294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 57378295 . G . PASS END=57378295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 57378296 . A . PASS END=57378298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 57383238 . G . PASS END=57383263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1041:0,84,255:37,0 chr1 57383264 . T . PASS END=57383264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 57383265 . G . PASS END=57383357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:32:0,83,1216:0,83,255:40,0 chr1 57383358 . C . PASS END=57383375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:26,0 chr1 57383376 . C . PASS END=57383376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 57383377 . G . PASS END=57383379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 57383380 . G . PASS END=57383380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 57383381 . G . PASS END=57383381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 57383382 . C . PASS END=57383389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:19,0 chr1 57395077 . C . PASS END=57395213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:36:0,89,1368:0,89,255:40,0 chr1 57395214 . T . PASS END=57395231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1305:0,105,255:38,0 chr1 57397483 . T . PASS END=57397551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1255:0,89,255:40,0 chr1 57399008 . C . PASS END=57399022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,886:0,65,255:26,0 chr1 57399023 . C . PASS END=57399031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr1 57399032 . C . PASS END=57399032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 57399033 . T . PASS END=57399118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:30:0,90,1096:0,90,255:40,0 chr1 57399119 . A . PASS END=57399119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:34,0 chr1 57399120 . G . PASS END=57399137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1116:0,86,255:35,0 chr1 57399138 . C . PASS END=57399155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:24:0,60,900:0,72,255:25,0 chr1 57399156 . C . PASS END=57399161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 57406522 . C . PASS END=57406525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 57406526 . A . PASS END=57406526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr1 57406527 . C . PASS END=57406529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,585:0,54,255:18,0 chr1 57406530 . T . PASS END=57406530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 57406531 . G . PASS END=57406540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,682:0,54,255:18,0 chr1 57406541 . G . PASS END=57406549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 57406550 . T . PASS END=57406550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 57406551 . G . PASS END=57406555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:25,0 chr1 57406556 . G . PASS END=57406573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,919:0,81,255:29,0 chr1 57406574 . A . PASS END=57406574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 57406575 . T . PASS END=57406575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 57406576 . C . PASS END=57406576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 57406577 . A . PASS END=57406583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 57406584 . C . PASS END=57406584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 57406585 . C . PASS END=57406605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 57406606 . C . PASS END=57406606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1100:0,52,255:30,0 chr1 57406607 . A . PASS END=57406651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1208:0,83,255:36,0 chr1 57406652 . A . PASS END=57406660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,900:0,96,255:25,0 chr1 57406661 . A . PASS END=57406663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:57:26:0,57,855:0,78,255:19,0 chr1 57406664 . A . PASS END=57406685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,574:0,44,255:18,0 chr1 57409369 . C . PASS END=57409497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:42:0,110,1535:0,110,255:40,0 chr1 57411494 . C . PASS END=57411497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:23,0 chr1 57411498 . T . PASS END=57411498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 57411499 . C . PASS END=57411499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 57411500 . T . PASS END=57411500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr1 57411501 . C . PASS END=57411518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,903:0,62,255:26,0 chr1 57411519 . C . PASS END=57411705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,1063:0,82,255:40,0 chr1 57411706 . T . PASS END=57411717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:34:0,66,990:0,69,255:26,0 chr1 57411718 . T . PASS END=57411718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:20,0 chr1 57411719 . G . PASS END=57411734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 57415228 . A . PASS END=57415425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:90:31:0,90,1350:0,93,255:40,0 chr1 57417721 . C . PASS END=57417849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:33:0,88,1082:0,88,255:40,0 chr1 57417850 . T . PASS END=57417850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1119:0,63,255:31,0 chr1 57417851 . A . PASS END=57417853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:32,0 chr1 57420359 . C . PASS END=57420500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,99,1485:0,119,255:40,0 chr1 57422442 . C . PASS END=57422446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 57422447 . T . PASS END=57422452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1029:0,84,255:33,0 chr1 57422453 . C . PASS END=57422453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:32,0 chr1 57422454 . A . PASS END=57422483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:34:0,95,1261:0,95,255:40,0 chr1 57422484 . C T, 193.56 PASS DP=49;MQ=249.78;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,23,0:0,26,0:144:231,147,0,1839,147,1839:255,147,0:0,0:1.9356e+02,1.4356e+02,0.0000e+00,4.5000e+02,1.7833e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,23:0,0,20,29 chr1 57422485 . G . PASS END=57422521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,134,255:40,0 chr1 57422522 . T . PASS END=57422583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:41:0,81,1215:0,88,255:40,0 chr1 57425202 . C . PASS END=57425264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,110,1800:0,110,255:40,0 chr1 57425693 . C . PASS END=57425843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:27:0,81,994:0,81,255:40,0 chr1 57425844 . T . PASS END=57425846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1305:0,120,255:31,0 chr1 57425847 . C . PASS END=57425849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:38:0,72,1080:0,114,255:24,0 chr1 57431530 . C . PASS END=57431621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,102,1490:0,102,255:40,0 chr1 57476368 . C . PASS END=57476372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr1 57476373 . T . PASS END=57476376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 57476377 . G . PASS END=57476378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 57476379 . C . PASS END=57476385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 57476386 . A . PASS END=57476391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr1 57476392 . A . PASS END=57476392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 57476393 . T . PASS END=57476393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 57476394 . T . PASS END=57476431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:30,0 chr1 57476432 . T . PASS END=57476432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 57476433 . C . PASS END=57476435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 57476436 . T . PASS END=57476458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 57476459 . T . PASS END=57476463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 57476818 . A . PASS END=57476945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:87:47:0,87,1305:0,114,255:40,0 chr1 57480556 . G . PASS END=57480697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:35:0,89,1236:0,89,255:40,0 chr1 57480698 . G . PASS END=57480698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1324:0,65,255:35,0 chr1 57480699 . G . PASS END=57480745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:31:0,87,1305:0,88,255:40,0 chr1 57480746 . G . PASS END=57480746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 57480747 . A . PASS END=57480747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 57480748 . A . PASS END=57480748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:28,0 chr1 57480749 . A . PASS END=57480753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 57480754 . T . PASS END=57480754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 57480755 . A . PASS END=57480760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:29,0 chr1 57480761 . T . PASS END=57480761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 57480762 . T . PASS END=57480763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1016:0,87,255:29,0 chr1 57480764 . T . PASS END=57480764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 57480765 . T . PASS END=57480767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 57480768 . C . PASS END=57480768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 57480769 . C . PASS END=57480831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1089:0,80,255:35,0 chr1 57480832 . C . PASS END=57480833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 57480834 . G . PASS END=57480886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:33,0 chr1 57480887 . A . PASS END=57480887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 57480888 . G . PASS END=57480898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,990:0,82,255:33,0 chr1 57480899 . C . PASS END=57480899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:33,0 chr1 57480900 . A . PASS END=57480933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1199:0,99,255:34,0 chr1 57480934 . T . PASS END=57480934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:28,0 chr1 57480935 . T . PASS END=57480992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,86,255:35,0 chr1 57480993 . G . PASS END=57480993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:34,1 chr1 57480994 . C . PASS END=57480994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:38:0,80,1392:0,80,255:34,1 chr1 57480995 . C . PASS END=57480995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:32,0 chr1 57480996 . C . PASS END=57480999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:33,0 chr1 57481000 . G . PASS END=57481000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:31,0 chr1 57481001 . C . PASS END=57481015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:34,0 chr1 57481016 . T . PASS END=57481016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:33,0 chr1 57481017 . G . PASS END=57481022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr1 57481023 . T . PASS END=57481023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 57481024 . G . PASS END=57481070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1188:0,85,255:33,0 chr1 57481071 . A . PASS END=57481083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:24,0 chr1 57481084 . C . PASS END=57481103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 57481104 . C . PASS END=57481104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 57489204 . C . PASS END=57489312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,111,1450:0,114,255:40,0 chr1 57491654 . G . PASS END=57491716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,117,1661:0,117,255:40,0 chr1 57499059 . C . PASS END=57499106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:55:0,120,1800:0,135,255:40,0 chr1 57499196 . C . PASS END=57499237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,124,255:40,0 chr1 57499238 . A . PASS END=57499246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,131,255:40,0 chr1 57528557 . A . PASS END=57528616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,206,255:40,0 chr1 57535033 . C . PASS END=57535098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:66:0,120,1800:0,151,255:40,0 chr1 57536651 . C . PASS END=57536734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:77:0,120,1800:0,147,255:40,0 chr1 57537195 . C . PASS END=57537314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,177,255:40,0 chr1 57537956 . C . PASS END=57538076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:39:0,81,1215:0,101,255:40,0 chr1 57538077 . T . PASS END=57538084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:26,0 chr1 57538085 . G . PASS END=57538087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:27:0,54,810:0,81,255:19,0 chr1 57602216 . C . PASS END=57602314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:95:37:0,95,1360:0,95,255:40,0 chr1 57610918 . T . PASS END=57611102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:96:40:0,96,1440:0,120,255:40,0 chr1 57756636 . C . PASS END=57756702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,174,255:40,0 chr1 58939545 . T . PASS END=58939547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 58939548 . A . PASS END=58939548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 58939549 . C . PASS END=58939551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 58939552 . C . PASS END=58939552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 58939553 . G . PASS END=58939554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 58939555 . C . PASS END=58939555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 58939556 . A . PASS END=58939560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr1 58939561 . T . PASS END=58939561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 58939562 . C . PASS END=58939578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1133:0,80,255:33,0 chr1 58939579 . C . PASS END=58939579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:31,0 chr1 58939580 . T . PASS END=58939600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1105:0,82,255:32,0 chr1 58939601 . T . PASS END=58939601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 58939602 . C . PASS END=58939610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1202:0,83,255:28,0 chr1 58939611 . C . PASS END=58939611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:28,0 chr1 58939612 . T . PASS END=58939617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 58939618 . A . PASS END=58939619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 58939620 . A . PASS END=58939620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,915:0,32,255:24,0 chr1 58939621 . A . PASS END=58939621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr1 58939622 . A . PASS END=58939626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 58939627 . T . PASS END=58939627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr1 58939628 . C . PASS END=58939628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 58939629 . T . PASS END=58939640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:27,0 chr1 58946637 . T . PASS END=58946846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:81:34:0,81,1136:0,86,255:40,0 chr1 58971732 . C . PASS END=58971732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 58971733 . T . PASS END=58971733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 58971734 . G . PASS END=58971745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1002:0,81,255:36,0 chr1 58971746 . T . PASS END=58971746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1222:0,62,255:33,0 chr1 58971747 . A . PASS END=58971868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:37:0,81,1215:0,95,255:40,0 chr1 58971869 . T . PASS END=58971875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:71:29:0,71,1016:0,71,255:25,0 chr1 58971876 . A . PASS END=58971876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,929:0,54,255:22,0 chr1 58971877 . C . PASS END=58971881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,64,255:23,0 chr1 58992933 . C . PASS END=58993007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:55:0,120,1800:0,132,255:40,0 chr1 58996273 . C . PASS END=58996401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:37:0,108,1321:0,111,255:40,0 chr1 58999625 . A . PASS END=58999732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:40:0,104,1457:0,104,255:40,1 chr1 58999830 . T . PASS END=59000003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:37:0,96,1440:0,111,255:40,0 chr1 59002185 . T . PASS END=59002413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:35:0,81,1324:0,81,255:40,1 chr1 59004467 . C . PASS END=59004467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 59004468 . T . PASS END=59004468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 59004469 . G . PASS END=59004479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1368:0,81,255:39,0 chr1 59004480 . T . PASS END=59004480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:38,0 chr1 59004481 . T . PASS END=59004481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1360:0,46,255:39,0 chr1 59004482 . G . PASS END=59004938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:37:0,84,1251:0,84,255:40,0 chr1 59004939 . C . PASS END=59004945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,91,255:32,0 chr1 59004946 . C . PASS END=59004961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,64,255:25,0 chr1 59004962 . C . PASS END=59004966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 59041142 . T . PASS END=59041142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 59041201 . A . PASS END=59041201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 59041212 . A . PASS END=59041212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 59041559 . T . PASS END=59041559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 59041576 . T . PASS END=59041576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:32,0 chr1 59041621 . G . PASS END=59041621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 59041763 . C . PASS END=59041763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 59041798 . T . PASS END=59041798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:39,0 chr1 59041851 . G . PASS END=59041851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 59041857 . C . PASS END=59041875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,840:0,61,255:26,0 chr1 59041876 . C . PASS END=59041877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr1 59041878 . C . PASS END=59041878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,937:0,50,255:26,0 chr1 59041879 . A . PASS END=59041901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,892:0,61,255:25,0 chr1 59041902 . C . PASS END=59041903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,844:0,58,255:21,0 chr1 59041904 . C . PASS END=59041904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 59041905 . C . PASS END=59041905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:20,0 chr1 59041906 . T . PASS END=59041906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 59041907 . T . PASS END=59041907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:22,0 chr1 59041908 . C . PASS END=59041949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,826:0,61,255:26,0 chr1 59041950 . G . PASS END=59041954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 59041955 . T . PASS END=59041955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:25,0 chr1 59041956 . G . PASS END=59041956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 59041957 . C . PASS END=59041957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 59041958 . C . PASS END=59041963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 59041964 . C . PASS END=59041964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr1 59041965 . G . PASS END=59041965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 59041966 . A . PASS END=59041972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,1116:0,63,255:26,0 chr1 59041973 . C . PASS END=59042007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1092:0,87,255:31,0 chr1 59042008 . G . PASS END=59042008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 59042009 . T . PASS END=59042010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 59042011 . A . PASS END=59042036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,961:0,65,255:26,0 chr1 59042037 . A . PASS END=59042037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 59042038 . A . PASS END=59042038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 59042039 . T . PASS END=59042039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:24,0 chr1 59042040 . C . PASS END=59042042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,906:0,72,255:25,0 chr1 59042043 . G . PASS END=59042043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 59042044 . T . PASS END=59042046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,947:0,75,255:25,0 chr1 59042047 . A . PASS END=59042047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,793:0,36,255:21,0 chr1 59042048 . G . PASS END=59042062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 59042063 . T . PASS END=59042081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 59042082 . T . PASS END=59042083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 59042084 . C . PASS END=59042085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 59042086 . C . PASS END=59042092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 59042093 . C . PASS END=59042097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 59042098 . A . PASS END=59042112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,404:0,33,255:12,0 chr1 59042113 . C . PASS END=59042114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 59042115 . G . PASS END=59042131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 59042132 . C . PASS END=59042138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:12:0,23,405:0,23,255:9,0 chr1 59042139 . G . PASS END=59042144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:10,0 chr1 59042145 . C . PASS END=59042183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,258:0,24,255:9,0 chr1 59042184 . A . PASS END=59042184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 59042185 . C . PASS END=59042294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 59042295 . C . PASS END=59042305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 59042306 . C . PASS END=59042308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 59042309 . C . PASS END=59042313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 59042314 . A . PASS END=59042314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 59042315 . G . PASS END=59042317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 59042318 . C . PASS END=59042319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 59042320 . G . PASS END=59042328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 59042329 . A . PASS END=59042329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 59042330 . A . PASS END=59042361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:17,0 chr1 59042362 . A . PASS END=59042362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr1 59042363 . T . PASS END=59042376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 59042377 . G . PASS END=59042381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 59042382 . C . PASS END=59042386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 59042387 . G . PASS END=59042410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr1 59042411 . C . PASS END=59042411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 59042412 . G . PASS END=59042412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 59042413 . C . PASS END=59042426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,721:0,57,255:19,0 chr1 59042427 . G . PASS END=59042431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 59042432 . C . PASS END=59042496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 59042497 . T . PASS END=59042505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:14:0,39,585:0,41,255:13,0 chr1 59042506 . C . PASS END=59042506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 59042507 . A . PASS END=59042511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 59042512 . G . PASS END=59042519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 59042520 . G . PASS END=59042520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 59042521 . A . PASS END=59042529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 59042530 . T . PASS END=59042559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 59042560 . A . PASS END=59042560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 59042561 . C . PASS END=59042561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 59042562 . C . PASS END=59042562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 59042563 . A . PASS END=59042578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 59042579 . T . PASS END=59042579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 59042580 . G . PASS END=59042590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 59042591 . T . PASS END=59042591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 59042592 . G . PASS END=59042593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 59042594 . G . PASS END=59042594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:9,0 chr1 59042595 . C . PASS END=59042606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 59042607 . C . PASS END=59042617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 59042618 . A . PASS END=59042628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 59042629 . G . PASS END=59042638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,492:0,45,255:15,0 chr1 59042639 . C . PASS END=59042639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:13,0 chr1 59042640 . C . PASS END=59042646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 59042647 . C . PASS END=59042647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 59042648 . C . PASS END=59042649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr1 59042650 . G . PASS END=59042650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 59042651 . A . PASS END=59042653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 59042654 . C . PASS END=59042656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 59042657 . G . PASS END=59042667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr1 59042668 . T . PASS END=59042668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:17,0 chr1 59042669 . G . PASS END=59042679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:18,0 chr1 59042680 . C . PASS END=59042680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 59042681 . C . PASS END=59042691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,637:0,41,255:19,0 chr1 59042692 . G . PASS END=59042692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 59042693 . G . PASS END=59042693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 59042694 . G . PASS END=59042695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr1 59042696 . T . PASS END=59042696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 59042697 . G . PASS END=59042697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 59042698 . C . PASS END=59042698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 59042699 . A . PASS END=59042701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 59042702 . C . PASS END=59042704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,729:0,49,255:19,0 chr1 59042705 . T . PASS END=59042705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,759:0,35,255:18,0 chr1 59042706 . C . PASS END=59042713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,593:0,57,255:19,0 chr1 59042714 . T . PASS END=59042714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:17,0 chr1 59042715 . G . PASS END=59042734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:19,0 chr1 59042735 . C . PASS END=59042735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 59042736 . C . PASS END=59042736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 59042737 . T . PASS END=59042737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 59042738 . G . PASS END=59042740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 59042741 . C . PASS END=59042757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:12:0,36,421:0,36,255:12,0 chr1 59042758 . A . PASS END=59042758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:11,0 chr1 59042759 . C . PASS END=59042769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 59042770 . A . PASS END=59042775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 59042776 . A . PASS END=59042776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 59042777 . G . PASS END=59042779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,405:0,20,255:9,0 chr1 59042780 . G . PASS END=59042780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 59042781 . C . PASS END=59042781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,304:0,2,255:10,0 chr1 59042782 . A . PASS END=59042793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 59042794 . A . PASS END=59042796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 59042797 . G . PASS END=59042797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 59042798 . G . PASS END=59042798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 59042799 . T . PASS END=59042799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 59042800 . G . PASS END=59042828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,27,255:9,0 chr1 59042884 . G . PASS END=59042884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 59042932 . G . PASS END=59042932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 59042940 . C . PASS END=59042940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 59042988 . G . PASS END=59042988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 59043027 . C . LowGQ END=59043027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:6,0 chr1 59043069 . G . PASS END=59043069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr1 59043097 . C . PASS END=59043097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 59112149 . C . PASS END=59112149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 59112150 . T . PASS END=59112150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 59112151 . A . PASS END=59112151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 59112152 . T . PASS END=59112158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,907:0,45,255:27,0 chr1 59112159 . T . PASS END=59112160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 59112161 . C . PASS END=59112162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:27,0 chr1 59112163 . T . PASS END=59112163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:28,0 chr1 59112164 . T . PASS END=59112166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 59112167 . T . PASS END=59112172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 59112173 . A . PASS END=59112175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:28,0 chr1 59112176 . A . PASS END=59112176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 59112177 . A . PASS END=59112178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:28,0 chr1 59112179 . G . PASS END=59112181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 59112182 . C . PASS END=59112182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 59112183 . C . PASS END=59112184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:28,0 chr1 59112185 . G . PASS END=59112186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 59112187 . A . PASS END=59112187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:27,0 chr1 59112188 . T . PASS END=59112188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 59112189 . A . PASS END=59112189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:24,0 chr1 59112190 . A . PASS END=59112192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:27,0 chr1 59112193 . C . PASS END=59112193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,978:0,35,255:25,0 chr1 59112194 . A . PASS END=59112195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr1 59112196 . G . PASS END=59112196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 59112197 . A . PASS END=59112197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1047:0,16,255:25,0 chr1 59112198 . C . PASS END=59112199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,1063:0,51,255:27,0 chr1 59112200 . T . PASS END=59112200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 59112201 . T . PASS END=59112206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:29:0,51,919:0,51,255:26,0 chr1 59112207 . T . PASS END=59112210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:24,0 chr1 59112211 . T . PASS END=59112211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:21,0 chr1 59112212 . G . PASS END=59112212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 59112213 . C . PASS END=59112213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:21,0 chr1 59112214 . G . PASS END=59112228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 59112229 . A . PASS END=59112229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 59112230 . A . PASS END=59112241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 59125669 . T . PASS END=59125682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:33:0,91,1211:0,91,255:37,0 chr1 59125683 . C T, 166.47 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,20,0:0,20,0:116:204,119,0,1468,119,1468:255,120,0:0,0:1.6647e+02,1.1647e+02,0.0000e+00,4.5000e+02,1.5124e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,16:0,0,20,20 chr1 59125684 . C . PASS END=59125720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,106,1399:0,106,255:40,0 chr1 59125721 . T . PASS END=59125827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:96:40:0,96,1440:0,103,255:40,0 chr1 59126842 . T . PASS END=59126899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,201,255:40,0 chr1 59126901 . T . PASS END=59126901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 59127078 . C . PASS END=59127169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:84:0,120,1800:0,202,255:40,0 chr1 59127170 . T . PASS END=59127183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,174,255:40,2 chr1 59131171 . G . PASS END=59131273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:39:0,81,1378:0,81,255:40,0 chr1 59131274 . G . PASS END=59131303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:40:0,93,1395:0,103,255:40,0 chr1 59132710 . C . PASS END=59132869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:37:0,90,1269:0,110,255:40,0 chr1 59132870 . A . PASS END=59132873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:30,0 chr1 59132874 . T . PASS END=59132879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:30,0 chr1 59132880 . A . PASS END=59132893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,74,255:26,0 chr1 59132894 . C . PASS END=59132898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:18,0 chr1 59133519 . T . PASS END=59133593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:66:0,120,1800:0,181,255:40,0 chr1 59134233 . T . PASS END=59134238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,201,255:40,0 chr1 59134304 . C . PASS END=59134354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:96:0,120,1800:0,243,255:40,0 chr1 59134656 . C . PASS END=59134710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:84:0,120,1800:0,227,255:40,0 chr1 59137542 . C . PASS END=59137630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,141,255:40,0 chr1 59139245 . C . PASS END=59139260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,117,1440:0,117,255:40,0 chr1 59139261 . T . PASS END=59139322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,135,255:40,0 chr1 59141149 . C . PASS END=59141252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,114,1710:0,138,255:40,0 chr1 59142598 . C . PASS END=59142675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,118,1800:0,118,255:40,0 chr1 59142676 . T . PASS END=59142709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1215:0,99,255:40,0 chr1 59142710 . T . PASS END=59142712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 59142713 . T C, 143.31 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,17,0:0,15,0:93:181,96,0,1241,96,1241:255,96,0:0,0:1.4331e+02,9.3311e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,18:0,0,13,19 chr1 59142714 . G . PASS END=59142728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:25,0 chr1 59147457 . C . PASS END=59147457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 59147458 . A . PASS END=59147790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:80:31:0,80,1155:0,80,255:40,0 chr1 59147791 . T . PASS END=59147791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 59147792 . T . PASS END=59147800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 59147801 . G . PASS END=59147804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 59147805 . C . PASS END=59147809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 59147810 . G . PASS END=59147810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 59147811 . C . PASS END=59147814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 59147815 . G . PASS END=59147818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 59147819 . C . PASS END=59147827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 59147828 . C . PASS END=59147829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 59147830 . G . PASS END=59147871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1105:0,83,255:34,0 chr1 59147872 . T . PASS END=59147872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1087:0,71,255:32,0 chr1 59147873 . T . PASS END=59147888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1186:0,86,255:31,0 chr1 59147889 . G . PASS END=59147920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 59147921 . A . PASS END=59147922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 59147923 . A . PASS END=59147925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 59147926 . T C, 146.31 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,23,0:0,10,0:96:184,99,0,1260,99,1260:255,102,0:0,0:1.4631e+02,9.6314e+01,0.0000e+00,4.5000e+02,1.3108e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,17:0,0,16,17 chr1 59147927 . A . PASS END=59147939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1286:0,92,255:34,0 chr1 59147940 . T . PASS END=59147940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:33,0 chr1 59147941 . G . PASS END=59147963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:36:0,89,1283:0,89,255:40,0 chr1 59147964 . T . PASS END=59148080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,111,1582:0,116,255:40,0 chr1 59148081 . A . PASS END=59148117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:65:0,120,1800:0,170,255:40,0 chr1 59148118 . A T, 216.25 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,36,0:0,21,0:166:254,169,0,2053,169,2053:255,171,0:0,0:2.1625e+02,1.6625e+02,0.0000e+00,4.5000e+02,2.0102e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,41,16:0,0,28,29 chr1 59148119 . T . PASS END=59148155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,155,255:40,0 chr1 59148156 . T . PASS END=59148217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,104,1322:0,104,255:40,0 chr1 59150825 . C . PASS END=59150903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:51:0,120,1800:0,139,255:40,0 chr1 59150904 . C . PASS END=59150923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:77:0,120,1800:0,196,255:40,0 chr1 59154710 . C . PASS END=59154841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,117,1800:0,117,255:40,0 chr1 59155898 . A . PASS END=59155921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,170,255:40,0 chr1 59156012 . C . PASS END=59156089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:95:0,120,1800:0,252,255:40,0 chr1 59158533 . T . PASS END=59158594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:77:0,120,1800:0,190,255:40,2 chr1 59158595 . G . PASS END=59158603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,197,255:40,0 chr1 59160801 . A . PASS END=59160879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:77:0,120,1800:0,183,255:40,0 chr1 59165657 . C . PASS END=59165658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 59165659 . T . PASS END=59165659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:19,0 chr1 59165660 . G . PASS END=59165675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 59165676 . C . PASS END=59165676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 59165677 . C . PASS END=59165688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 59165689 . C . PASS END=59165689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 59165690 . C . PASS END=59165703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:21,0 chr1 59165704 . A . PASS END=59165704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 59165705 . T . PASS END=59165715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,62,255:21,0 chr1 59165716 . A . PASS END=59165716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 59165717 . G . PASS END=59165722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 59165723 . A . PASS END=59165723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 59165724 . T . PASS END=59165724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 59247747 . T . PASS END=59247759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 59247760 . A . PASS END=59247760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 59247761 . A . PASS END=59247761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 59247762 . C . PASS END=59247763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 59247764 . G . PASS END=59247764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 59247765 . C . PASS END=59247777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,900:0,61,255:26,0 chr1 59247778 . A . PASS END=59247932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1025:0,84,255:40,0 chr1 59247933 . T . PASS END=59247933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:28,0 chr1 59247934 . C . PASS END=59247961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,85,255:30,0 chr1 59247962 . T . PASS END=59247974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,901:0,64,255:26,0 chr1 59247975 . C . PASS END=59247977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr1 59247978 . C . PASS END=59248001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr1 59248002 . C . PASS END=59248002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:22,0 chr1 59248003 . A . PASS END=59248003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 59248004 . T . PASS END=59248004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 59248005 . G . PASS END=59248012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 59248013 . G . PASS END=59248013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 59248014 . G . PASS END=59248122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 59248123 . G . PASS END=59248126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,869:0,12,255:23,2 chr1 59248127 . G . PASS END=59248127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:25,0 chr1 59248128 . C . PASS END=59248131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 59248132 . T . PASS END=59248171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr1 59248172 . C . PASS END=59248172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:19,0 chr1 59248173 . G . PASS END=59248179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 59248180 . G . PASS END=59248183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 59248184 . C . PASS END=59248188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 59248189 . C . PASS END=59248207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,676:0,44,255:19,0 chr1 59248208 . C . PASS END=59248208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 59248209 . T . PASS END=59248277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,540:0,40,255:19,0 chr1 59248278 . G . PASS END=59248279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,574:0,34,255:14,0 chr1 59248280 . C . PASS END=59248313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,590:0,40,255:18,0 chr1 59248314 . C . PASS END=59248314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 59248315 . A . PASS END=59248318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 59248319 . T . PASS END=59248323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 59248324 . G . PASS END=59248358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 59248359 . G . PASS END=59248362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 59248363 . A . PASS END=59248367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 59248368 . G . PASS END=59248371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 59248372 . T . PASS END=59248372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 59248373 . G . PASS END=59248379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 59248380 . C . PASS END=59248380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 59248381 . A . PASS END=59248393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 59248394 . C . PASS END=59248394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 59248395 . G . PASS END=59248459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,886:0,61,255:26,0 chr1 59248460 . T . PASS END=59248462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 59248463 . G . PASS END=59248553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,806:0,63,255:26,0 chr1 59248554 . C . PASS END=59248555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 59248556 . A . PASS END=59248557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 59248558 . G . PASS END=59248558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:20,0 chr1 59248559 . T . PASS END=59248561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 59248562 . G . PASS END=59248562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 59248563 . G . PASS END=59248569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 59248570 . G . PASS END=59248570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 59248571 . A . PASS END=59248572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 59248573 . T . PASS END=59248573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 59248574 . T . PASS END=59248584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,626:0,60,255:21,0 chr1 59248585 . A . PASS END=59248586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 59248587 . G . PASS END=59248587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 59248588 . T . PASS END=59248598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,810:0,53,255:19,0 chr1 59248599 . G . PASS END=59248605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 59248606 . A . PASS END=59248606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 59248607 . C . PASS END=59248607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 59248608 . T . PASS END=59248608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:19,0 chr1 59248609 . G . PASS END=59248617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 59248618 . A . PASS END=59248619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:23:0,57,855:0,59,255:20,0 chr1 59248620 . G . PASS END=59248627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:23,0 chr1 59248628 . T . PASS END=59248628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 59248629 . C . PASS END=59248633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,856:0,61,255:24,0 chr1 59248634 . T . PASS END=59248634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 59248635 . C . PASS END=59248641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:24,0 chr1 59248642 . A . PASS END=59248642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 59248643 . G . PASS END=59248661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,811:0,61,255:26,0 chr1 59248662 . G . PASS END=59248662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:26,0 chr1 59248663 . C . PASS END=59248666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr1 59248667 . A . PASS END=59248667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 59248668 . A . PASS END=59248670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:29,0 chr1 59248671 . T . PASS END=59248673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 59248674 . G . PASS END=59248674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 59248675 . C . PASS END=59248676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:48:29:0,48,885:0,48,255:28,0 chr1 59248677 . C . PASS END=59248677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 59248678 . T . PASS END=59248678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 59248679 . C . PASS END=59248679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 59248680 . G . PASS END=59248680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 59248681 . G . PASS END=59248687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1029:0,90,255:30,0 chr1 59248688 . G . PASS END=59248688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 59248689 . G . PASS END=59248693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 59248694 . A . PASS END=59248704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1016:0,71,255:26,0 chr1 59248705 . G . PASS END=59248706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:54:29:0,54,992:0,54,255:26,0 chr1 59248707 . A . PASS END=59248707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 59248708 . T . PASS END=59248708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 59248709 . C . PASS END=59248720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:25,0 chr1 59248721 . T . PASS END=59248721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:23,0 chr1 59248722 . C . PASS END=59248725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,840:0,61,255:25,0 chr1 59248726 . T . PASS END=59248726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:21,0 chr1 59248727 . C . PASS END=59248736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,882:0,62,255:23,0 chr1 59248737 . A . PASS END=59248742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,730:0,52,255:19,0 chr1 59787222 . A . PASS END=59787228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:24,0 chr1 59787229 . G . PASS END=59787229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:24,0 chr1 59787230 . T . PASS END=59787230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 59787231 . G . PASS END=59787245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,947:0,72,255:26,0 chr1 59787246 . G . PASS END=59787248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 59787249 . A . PASS END=59787249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:26,0 chr1 59787250 . G . PASS END=59787312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1103:0,80,255:39,0 chr1 59787313 . G . PASS END=59787326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,105,1443:0,107,255:38,0 chr1 59787327 . T . PASS END=59787327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:34,0 chr1 59787328 . T . PASS END=59787349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1343:0,97,255:38,0 chr1 59787350 . T G, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=3.119;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:8,12,0:9,11,0:47:85,0,48,805,600,1405:255,0,255:16,0:5.0000e+01,7.7659e-05,5.1041e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,7,11,12:1,16,10,13 chr1 59787351 . T . PASS END=59787387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:37,0 chr1 59787388 . A . PASS END=59787401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:25,0 chr1 59787402 . G . PASS END=59787422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,637:0,41,255:18,0 chr1 59792477 . A . PASS END=59792496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,158,255:40,0 chr1 59792497 . A C, 38.85 PASS DP=72;MQ=250.00;MQRankSum=6.799;ReadPosRankSum=0.326;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,23,0:0.319,0.000:72:24,12,0:25,11,0:39:74,0,50,806,1715,2521:255,0,255:40,0:3.8855e+01,5.8713e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,28,9,14:28,21,12,11 chr1 59792498 . C . PASS END=59792509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:69:0,120,1800:0,160,255:40,0 chr1 59805630 . A . PASS END=59805741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:51:0,120,1800:0,123,255:40,0 chr1 59811919 . G . PASS END=59811926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 59811927 . C . PASS END=59811937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:24,0 chr1 59811938 . C . PASS END=59811938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 59811939 . A . PASS END=59811954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,933:0,75,255:26,0 chr1 59811955 . A . PASS END=59811957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 59811958 . G . PASS END=59811958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 59811959 . A . PASS END=59812037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1109:0,80,255:37,0 chr1 59812038 . A . PASS END=59812038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr1 59812039 . T . PASS END=59812042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 59812043 . G . PASS END=59812044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 59812045 . C . PASS END=59812047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 59812048 . C . PASS END=59812070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,992:0,78,255:26,0 chr1 59844421 . A . PASS END=59844433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,142,255:40,0 chr1 59844434 . T . PASS END=59844470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,142,255:40,0 chr1 59844471 . G A, 49.99 PASS DP=69;MQ=249.71;MQRankSum=6.715;ReadPosRankSum=5.311;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,34,0:0.493,0.000:69:19,17,0:16,17,0:48:85,0,50,1208,1223,2431:255,0,255:33,0:4.9990e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,18,14,20:17,18,13,21 chr1 59844472 . G . PASS END=59844508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,146,255:40,0 chr1 59844509 . G . PASS END=59844509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 59922633 . G . PASS END=59922748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,108,1747:0,108,255:40,0 chr1 59977983 . G . PASS END=59977983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 59977984 . A . PASS END=59977985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 59977986 . A . PASS END=59977986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 59977987 . C . PASS END=59977990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 59977991 . G . PASS END=59977991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:30,0 chr1 59977992 . T . PASS END=59977992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr1 59977993 . G . PASS END=59977993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr1 59977994 . C . PASS END=59978111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1149:0,80,255:40,0 chr1 60019796 . G . PASS END=60019807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 60019808 . C . PASS END=60019822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 60019823 . A . PASS END=60019823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 60019824 . C . PASS END=60019841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,847:0,69,255:23,0 chr1 60019842 . G . PASS END=60019843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 60019844 . A . PASS END=60019845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 60019846 . C . PASS END=60019852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 60019853 . C . PASS END=60019881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 60019882 . T . PASS END=60019882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:19,0 chr1 60019883 . C . PASS END=60019887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 60019888 . T . PASS END=60019888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 60019889 . G . PASS END=60019899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 60073475 . A . PASS END=60073582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:41:0,93,1496:0,93,255:40,0 chr1 60091660 . A . PASS END=60091721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:35:0,92,1258:0,92,255:40,0 chr1 60103900 . A . PASS END=60103907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 60103908 . G . PASS END=60103908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 60103909 . T . PASS END=60103909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 60103910 . A . PASS END=60103913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,832:0,62,255:26,0 chr1 60103914 . A . PASS END=60103914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr1 60103915 . T . PASS END=60103915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 60103916 . G . PASS END=60103916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 60103917 . C . PASS END=60103917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 60103918 . A . PASS END=60104047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,1056:0,84,255:40,0 chr1 60106952 . A . PASS END=60107023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,118,1800:0,118,255:40,0 chr1 60125891 . G . PASS END=60125965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,129,255:40,0 chr1 60132955 . T . PASS END=60133075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:36:0,87,1305:0,104,255:40,0 chr1 60139711 . G . PASS END=60139805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,124,255:40,0 chr1 60163320 . T . PASS END=60163331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:30,0 chr1 60223603 . G . PASS END=60223664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:86:0,120,1800:0,238,255:40,0 chr1 60228175 . A . PASS END=60228256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,120,1800:0,130,255:40,0 chr1 60238440 . A . PASS END=60238472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,134,255:40,0 chr1 60280790 . A . PASS END=60280790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 60280791 . T . PASS END=60280794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 60280795 . G . PASS END=60280795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 60280796 . G . PASS END=60280801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 60280802 . C . PASS END=60280805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 60280806 . C . PASS END=60280806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 60280807 . G . PASS END=60280807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr1 60280808 . C . PASS END=60280809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 60280810 . G . PASS END=60280812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 60280813 . G . PASS END=60280813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 60280814 . C . PASS END=60280818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 60280819 . T . PASS END=60280819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 60280820 . A . PASS END=60280823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 60280824 . T . PASS END=60280824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 60280825 . G . PASS END=60280837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:30,0 chr1 60280838 . A . PASS END=60280838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:30,0 chr1 60280839 . G . PASS END=60280841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:30,0 chr1 60280842 . T . PASS END=60280842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 60280843 . C . PASS END=60280843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 60280844 . A . PASS END=60280845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 60280846 . G . PASS END=60280846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 60280847 . A . PASS END=60280848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 60280849 . C . PASS END=60280852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 60287530 . C . PASS END=60287531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:31,0 chr1 60287532 . G . PASS END=60287533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 60287534 . A . PASS END=60287534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:30,0 chr1 60287535 . G . PASS END=60287535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1084:0,41,255:30,0 chr1 60287536 . A . PASS END=60287547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:32:0,90,1350:0,96,255:40,0 chr1 60287548 . G . PASS END=60287548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1476:0,63,255:40,0 chr1 60287549 . C . PASS END=60287615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:94:41:0,94,1450:0,94,255:40,0 chr1 60287740 . A . PASS END=60287762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,166,255:40,0 chr1 60294452 . T . PASS END=60294524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,155,255:40,0 chr1 60297835 . G . PASS END=60297885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:71:0,120,1800:0,200,255:40,0 chr1 60299077 . T . PASS END=60299087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1088:0,90,255:34,0 chr1 60299088 . G . PASS END=60299124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:34:0,89,1128:0,89,255:40,0 chr1 60299125 . A G, 49.28 PASS DP=57;MQ=250.00;MQRankSum=6.449;ReadPosRankSum=4.622;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,26,0:0.456,0.000:57:20,15,0:11,11,0:48:84,0,50,899,1085,1984:255,0,255:31,0:4.9275e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,15,11:14,17,10,16 chr1 60299126 . T . PASS END=60299162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,157,255:40,0 chr1 60299163 . G . PASS END=60299209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,122,255:40,0 chr1 60301017 . A . PASS END=60301084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:72:0,120,1800:0,200,255:40,0 chr1 60302545 . T . PASS END=60302607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,3:82:99:75:0,120,1800:0,196,255:40,0 chr1 60305980 . C . PASS END=60306063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:66:0,120,1800:0,186,255:40,0 chr1 60309104 . G . PASS END=60309270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,105,1498:0,110,255:40,0 chr1 60312717 . G . PASS END=60312857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:56:0,105,1575:0,127,255:40,0 chr1 60313987 . G . PASS END=60314188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:51:0,120,1647:0,120,255:40,0 chr1 60314745 . G . PASS END=60314855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,134,255:40,0 chr1 60320386 . A . PASS END=60320499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,105,1575:0,105,255:40,0 chr1 60324100 . A . PASS END=60324187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:79:0,120,1800:0,203,255:40,0 chr1 60324657 . A . PASS END=60324717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,2:109:99:90:0,120,1800:0,241,255:40,0 chr1 60325860 . G . PASS END=60325860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 60325861 . G . PASS END=60325866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:34,0 chr1 60325867 . T . PASS END=60325867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1248:0,77,255:33,0 chr1 60325868 . T . PASS END=60326000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:36:0,87,1305:0,98,255:40,0 chr1 60328456 . G . PASS END=60328549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:38:0,87,1450:0,87,255:40,0 chr1 60329497 . A . PASS END=60329511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,224,255:40,0 chr1 60329512 . T . PASS END=60329540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:96:52:0,96,1440:0,140,255:40,0 chr1 60330304 . T . PASS END=60330338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:91:0,120,1800:0,255,255:40,0 chr1 60330835 . G . PASS END=60330917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,3:80:99:74:0,120,1800:0,181,255:40,0 chr1 60331544 . T . PASS END=60331644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:72:0,120,1800:0,189,255:40,0 chr1 60333922 . G . PASS END=60334023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:84:59:0,84,1685:0,84,255:40,0 chr1 60336714 . A . PASS END=60336782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:62:0,120,1800:0,186,255:40,0 chr1 60338467 . A . PASS END=60338483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:26,0 chr1 60338484 . A . PASS END=60338488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 60338489 . G . PASS END=60338489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 60338490 . G . PASS END=60338490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 60338491 . A . PASS END=60338491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 60338492 . T . PASS END=60338495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:30,0 chr1 60338496 . A . PASS END=60338559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1077:0,94,255:35,0 chr1 60338560 . T . PASS END=60338592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:35,0 chr1 60338593 . A . PASS END=60338596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr1 60338597 . G A, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=4.101;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,17,0:0.567,0.000:30:11,10,0:2,7,0:48:85,0,49,608,464,1071:255,0,255:12,0:5.0000e+01,7.1964e-05,5.1838e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,9,8:8,5,8,9 chr1 60338598 . A . PASS END=60338601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 60338602 . C . PASS END=60338603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 60338604 . C . PASS END=60338628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,961:0,65,255:26,0 chr1 60338629 . T . PASS END=60338634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:54:26:0,54,810:0,61,255:18,0 chr1 60338635 . T . PASS END=60338637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:16,0 chr1 60359323 . T . PASS END=60359323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:27,0 chr1 60359324 . T . PASS END=60359325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 60359326 . C . PASS END=60359326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 60359327 . A . PASS END=60359328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1015:0,84,255:29,0 chr1 60359329 . C . PASS END=60359332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 60359333 . G . PASS END=60359333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 60359334 . G . PASS END=60359334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:29,0 chr1 60359335 . A . PASS END=60359452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1119:0,84,255:40,0 chr1 60359453 . A . PASS END=60359453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 60359454 . T . PASS END=60359473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,107,255:37,0 chr1 60359474 . A . PASS END=60359474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1135:0,71,255:28,0 chr1 60359475 . A . PASS END=60359476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 60359477 . T . PASS END=60359498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:24,0 chr1 60359499 . T . PASS END=60359499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:19,0 chr1 60359500 . T . PASS END=60359501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 60366637 . C . PASS END=60366727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1169:0,80,255:37,0 chr1 60366728 . T . PASS END=60366728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:31,0 chr1 60366729 . G . PASS END=60366738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:33,0 chr1 60366739 . T . PASS END=60366773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,969:0,65,255:25,0 chr1 60366774 . C . PASS END=60366774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 60366775 . C . PASS END=60366775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 60370171 . C . PASS END=60370188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,134,255:40,0 chr1 60370543 . C . PASS END=60370708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:33:0,82,1073:0,82,255:40,0 chr1 60370709 . T . PASS END=60370712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 60370713 . T . PASS END=60370719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:29,0 chr1 60370720 . T . PASS END=60370720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 60370721 . T . PASS END=60370727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 60370728 . T . PASS END=60370728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 60370729 . T . PASS END=60370730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 60373458 . C . PASS END=60373564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1019:0,85,255:40,0 chr1 60373565 . T . PASS END=60373565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:27,0 chr1 60373566 . C . PASS END=60373575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 60373576 . A . PASS END=60373576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 60373577 . C . PASS END=60373580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 60373581 . A . PASS END=60373581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 60373582 . A . PASS END=60373584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 60373585 . A . PASS END=60373599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 60375456 . C . PASS END=60375621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:88:35:0,88,1174:0,88,255:40,0 chr1 60375622 . A . PASS END=60375632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:72:36:0,72,1080:0,108,255:25,0 chr1 60377280 . C . PASS END=60377436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:33:0,86,1215:0,86,255:40,0 chr1 60377437 . T . PASS END=60377437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1457:0,72,255:30,0 chr1 60377438 . G . PASS END=60377440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,102,1530:0,138,255:34,0 chr1 60377834 . C . PASS END=60377949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,99,1366:0,100,255:40,0 chr1 60377950 . T . PASS END=60377962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:26:0,63,1035:0,63,255:25,0 chr1 60377963 . G . PASS END=60377963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 60377964 . G . PASS END=60377973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,863:0,62,255:26,0 chr1 60377974 . A . PASS END=60377980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 60377981 . A . PASS END=60377983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 60381610 . C . PASS END=60381611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 60381612 . T . PASS END=60381612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 60381613 . T . PASS END=60381619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:29,0 chr1 60381620 . A . PASS END=60381620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 60381621 . A . PASS END=60381625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1058:0,80,255:32,0 chr1 60381626 . A . PASS END=60381626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr1 60381627 . T . PASS END=60381745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:32:0,96,1225:0,96,255:40,2 chr1 60381746 . A . PASS END=60381746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:65:55:0,65,1740:0,65,255:40,2 chr1 60381747 . A . PASS END=60381772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:50:0,110,1385:0,110,255:40,0 chr1 60392194 . T . PASS END=60392200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:25,0 chr1 60392201 . A . PASS END=60392418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1047:0,81,255:40,0 chr1 60392494 . C . PASS END=60392494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 60456345 . T . PASS END=60456352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 60456353 . C . PASS END=60456362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:25,0 chr1 60456363 . C . PASS END=60456381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 60456382 . A . PASS END=60456382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,952:0,57,255:26,0 chr1 60456383 . G . PASS END=60456384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 60456385 . A . PASS END=60456386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 60456387 . A . PASS END=60456390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 60456391 . T . PASS END=60456391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,970:0,60,255:27,0 chr1 60456392 . C . PASS END=60456404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1205:0,90,255:33,0 chr1 60456405 . T . PASS END=60456405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 60456406 . C . PASS END=60456442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1182:0,83,255:35,0 chr1 60456443 . A . PASS END=60456443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1184:0,69,255:32,0 chr1 60456444 . C . PASS END=60456454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 60456455 . T . PASS END=60456455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:27,0 chr1 60456456 . G . PASS END=60456460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 60456461 . T . PASS END=60456461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 60456462 . G . PASS END=60456464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 60456465 . G . PASS END=60456478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 60456479 . G . PASS END=60456498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,605:0,40,255:19,0 chr1 60456499 . A . PASS END=60456499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:15,0 chr1 60456500 . G . PASS END=60456505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 60463281 . C . PASS END=60463281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 60463282 . T . PASS END=60463282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 60463283 . G . PASS END=60463283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 60463284 . T . PASS END=60463284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 60463285 . G . PASS END=60463289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 60463290 . T . PASS END=60463292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 60463293 . G . PASS END=60463473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1215:0,83,255:40,0 chr1 60463474 . C . PASS END=60463488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:27:0,75,1125:0,81,255:26,0 chr1 60466749 . C . PASS END=60466776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1543:0,113,255:40,0 chr1 60466777 . T . PASS END=60466799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1575:0,107,255:40,0 chr1 60466800 . A . PASS END=60466800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1512:0,55,255:35,0 chr1 60466801 . G . PASS END=60466813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:43:0,93,1395:0,99,255:35,0 chr1 60466814 . T C, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.534;ReadPosRankSum=-0.830;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,21,0:0.500,0.000:42:14,13,0:7,8,0:48:85,0,50,735,645,1380:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,13,8:9,12,15,6 chr1 60466815 . C . PASS END=60466824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:84:43:0,84,1260:0,96,255:32,0 chr1 60466825 . T . PASS END=60466825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1390:0,79,255:27,0 chr1 60466826 . T . PASS END=60466828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:42:0,84,1260:0,109,255:28,0 chr1 60476064 . C . PASS END=60476095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:67:0,120,1800:0,185,255:40,0 chr1 60476096 . G . PASS END=60476128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,149,255:40,0 chr1 60491073 . T . PASS END=60491166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:45:0,90,1350:0,124,255:40,0 chr1 60491167 . T . PASS END=60491170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:40:0,75,1125:0,120,255:26,0 chr1 60499148 . C . PASS END=60499149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 60499150 . T . PASS END=60499150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 60499151 . A . PASS END=60499154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:33,0 chr1 60499155 . A . PASS END=60499155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 60499156 . G . PASS END=60499161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1227:0,102,255:34,0 chr1 60499162 . G . PASS END=60499162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:32,0 chr1 60499163 . G . PASS END=60499303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:34:0,80,1044:0,80,255:40,0 chr1 60499304 . A . PASS END=60499306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1170:0,66,255:26,0 chr1 60499307 . T . PASS END=60499307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 60499308 . G . PASS END=60499312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1094:0,54,255:26,0 chr1 60499313 . G . PASS END=60499313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 60503083 . T . PASS END=60503152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,133,255:40,2 chr1 60503664 . C . PASS END=60503779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:30:0,80,1155:0,80,255:40,0 chr1 60505589 . C . PASS END=60505615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1219:0,92,255:40,0 chr1 60505616 . T . PASS END=60505852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:36:0,89,1214:0,89,255:40,0 chr1 60506663 . C . PASS END=60506676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1097:0,80,255:32,0 chr1 60506677 . A . PASS END=60506677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:32,0 chr1 60506678 . G . PASS END=60506682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:34,0 chr1 60506683 . C . PASS END=60506683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr1 60506684 . T . PASS END=60506768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:33:0,86,1241:0,86,255:40,0 chr1 60506769 . A . PASS END=60506769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 60506770 . C . PASS END=60506773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 60506774 . G . PASS END=60506803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 60520876 . A . PASS END=60521110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:46:0,120,1800:0,134,255:40,0 chr1 60538209 . A . PASS END=60538315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:39:0,84,1333:0,84,255:40,0 chr1 61331043 . A . PASS END=61331114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:42:0,93,1488:0,93,255:40,0 chr1 61331115 . A . PASS END=61331115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr1 61331116 . T . PASS END=61331116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:61:49:0,61,1495:0,61,255:40,0 chr1 61331117 . C . PASS END=61331138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:42:0,81,1215:0,93,255:40,0 chr1 61439418 . A . PASS END=61439428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 61439429 . A . PASS END=61439429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 61439430 . C . PASS END=61439447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:31,0 chr1 61439448 . G . PASS END=61439448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 61439449 . C . PASS END=61439468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,90,255:31,0 chr1 61439469 . A . PASS END=61439493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 61439494 . C . PASS END=61439504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 61543298 . A . PASS END=61543300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,226,255:40,0 chr1 61547616 . A . PASS END=61547619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 61547620 . A . PASS END=61547620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 61547621 . A . PASS END=61547624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,693:0,63,255:21,0 chr1 61547625 . T . PASS END=61547625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 61547626 . G . PASS END=61547636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 61547637 . T . PASS END=61547637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 61547638 . C . PASS END=61547640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 61547641 . C . PASS END=61547641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 61547642 . C . PASS END=61547666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,672:0,63,255:21,0 chr1 61547667 . T . PASS END=61547667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:17,0 chr1 61547668 . G . PASS END=61547689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 61547690 . C . PASS END=61547690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:14,0 chr1 61547691 . T . PASS END=61547693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 61547694 . C . PASS END=61547694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:13,0 chr1 61547695 . A . PASS END=61547698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 61547699 . T . PASS END=61547701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 61547702 . C . PASS END=61547702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:12,0 chr1 61547703 . C . PASS END=61547703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 61547704 . C . PASS END=61547709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 61547710 . C . PASS END=61547710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 61547711 . T . PASS END=61547711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:10,0 chr1 61547712 . C . PASS END=61547717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 61547718 . A . PASS END=61547718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,415:0,28,255:9,0 chr1 61547719 . G . PASS END=61547719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 61548433 . A . PASS END=61548459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:95:46:0,95,1656:0,95,255:40,0 chr1 61548460 . A . PASS END=61548460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1518:0,78,255:40,0 chr1 61548461 . G . PASS END=61548490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,107,1250:0,107,255:40,0 chr1 61553819 . A . PASS END=61553819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 61553821 . G . PASS END=61554308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1215:0,90,255:40,0 chr1 61554309 . T . PASS END=61554309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 61554310 . A . PASS END=61554318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 61554319 . G . PASS END=61554319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 61554320 . A . PASS END=61554321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1020:0,90,255:30,0 chr1 61554322 . T . PASS END=61554322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 61554323 . T . PASS END=61554324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 61554325 . T . PASS END=61554325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 61554326 . A . PASS END=61554336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 61554337 . T . PASS END=61554347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr1 61554348 . A . PASS END=61554352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 61577043 . G . PASS END=61577080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,163,255:40,0 chr1 61598367 . G . PASS END=61598383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:76:0,120,1800:0,205,255:40,0 chr1 61743192 . A . PASS END=61743197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,149,255:40,0 chr1 61743198 . G . PASS END=61743257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,143,255:40,0 chr1 61798184 . G . PASS END=61798258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:96:42:0,96,1440:0,126,255:40,0 chr1 61818122 . C . PASS END=61818226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:33:0,86,1247:0,86,255:40,0 chr1 61818227 . C . PASS END=61818238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,77,255:25,0 chr1 61818239 . G . PASS END=61818239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 61824808 . T . PASS END=61824808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:35,0 chr1 61824819 . C . PASS END=61824946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:37:0,96,1300:0,96,255:40,0 chr1 61838369 . T . PASS END=61838403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:74:0,120,1800:0,206,255:40,0 chr1 61848909 . G . PASS END=61849019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:82:33:0,82,1125:0,82,255:40,2 chr1 61849020 . T . PASS END=61849031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:26,0 chr1 61849032 . C . PASS END=61849037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:17,0 chr1 61851543 . A . PASS END=61851596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,122,255:40,0 chr1 61865048 . C . PASS END=61865070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:33,0 chr1 61869757 . A . PASS END=61869782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:89:46:0,89,1529:0,89,255:40,0 chr1 61869783 . G A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=2.134;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,26,0:0.531,0.000:49:6,16,0:17,10,0:48:85,0,50,872,791,1663:255,0,255:19,0:5.0000e+01,6.6527e-05,5.2757e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,7,12,14:9,14,12,14 chr1 61869784 . C . PASS END=61869820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:51:0,109,1738:0,109,255:40,0 chr1 61869821 . C . PASS END=61869950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:34:0,81,1215:0,102,255:40,0 chr1 61869951 . C . PASS END=61869954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:32:0,69,1035:0,82,255:24,0 chr1 61872234 . C . PASS END=61872234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 61872235 . C . PASS END=61872235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 61872236 . C . PASS END=61872236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 61872237 . A . PASS END=61872238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,466:0,14,255:14,0 chr1 61872239 . T . PASS END=61872240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 61872241 . G . PASS END=61872242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 61872243 . A . PASS END=61872243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 61872244 . G . PASS END=61872245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 61872246 . A . PASS END=61872248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 61872249 . C . PASS END=61872249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 61872250 . A . PASS END=61872251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr1 61872252 . G . PASS END=61872254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 61872255 . A . PASS END=61872256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr1 61872257 . G . PASS END=61872257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 61872258 . G . PASS END=61872259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:18,0 chr1 61872260 . G . PASS END=61872267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,735:0,60,255:26,0 chr1 61872268 . C . PASS END=61872278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 61872279 . A . PASS END=61872291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr1 61872292 . C . PASS END=61872292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 61872293 . A . PASS END=61872293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 61872294 . C . PASS END=61872294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 61872295 . C . PASS END=61872311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 61872312 . A . PASS END=61872313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 61872314 . G . PASS END=61872314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:24,0 chr1 61872315 . G . PASS END=61872330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,908:0,65,255:26,0 chr1 61872331 . T . PASS END=61872331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 61872332 . G . PASS END=61872358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,878:0,66,255:24,0 chr1 61872359 . C . PASS END=61872359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 61872360 . A . PASS END=61872362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 61872363 . T . PASS END=61872367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,640:0,49,255:18,0 chr1 61872368 . A . PASS END=61872368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:15,0 chr1 61872369 . G . PASS END=61872372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:16,0 chr1 61872373 . G . PASS END=61872392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,35,255:13,0 chr1 61872393 . T . LowGQ END=61872393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:5,0,255:12,0 chr1 61872394 . C . PASS END=61872394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 61872395 . A . PASS END=61872395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 61872396 . C . PASS END=61872399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 61892137 . C . PASS END=61892228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,107,1620:0,107,255:40,2 chr1 61905123 . G . PASS END=61905190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:38:0,99,1485:0,101,255:40,0 chr1 61909195 . G . PASS END=61909209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,100,1706:0,100,255:40,0 chr1 61920975 . T . PASS END=61921051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:36:0,96,1440:0,104,255:40,0 chr1 62149108 . T . PASS END=62149110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 62149111 . T . PASS END=62149199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,172,255:40,0 chr1 62149200 . C . PASS END=62149218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,99,1485:0,164,255:40,0 chr1 62160369 . C . PASS END=62160442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:72:0,120,1800:0,191,255:40,0 chr1 62165825 . T . PASS END=62165946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,114,1710:0,125,255:40,0 chr1 62166606 . C . PASS END=62166697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,112,1515:0,112,255:40,0 chr1 62175001 . A . PASS END=62175096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,108,1620:0,127,255:40,0 chr1 62175097 . G . PASS END=62175109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,102,1574:0,102,255:36,0 chr1 62189385 . C . PASS END=62189417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:52:0,120,1800:0,126,255:40,0 chr1 62189418 . C . PASS END=62189458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,187,255:40,0 chr1 62190574 . C . PASS END=62190667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1241:0,87,255:40,0 chr1 62190668 . C . PASS END=62190668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:33,0 chr1 62190669 . C . PASS END=62190694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:35,0 chr1 62190695 . C . PASS END=62190711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:24:0,69,1035:0,72,255:25,0 chr1 62190712 . T . PASS END=62190712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 62190713 . G . PASS END=62190727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 62190728 . A . PASS END=62190733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 62190734 . A . PASS END=62190734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,654:0,24,255:14,0 chr1 62190735 . C . PASS END=62190750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,44,255:15,0 chr1 62190751 . G . PASS END=62190757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 62190758 . G . PASS END=62190758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr1 62190759 . G . PASS END=62190764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 62190765 . A . PASS END=62190765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 62190766 . C . PASS END=62190773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 62190774 . A . PASS END=62190779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 62190780 . A . PASS END=62190780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 62190781 . G . PASS END=62190785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 62190786 . C . PASS END=62190786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 62190787 . C . PASS END=62190799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 62190800 . A . PASS END=62190807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 62190808 . T . PASS END=62190812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 62190813 . C . PASS END=62190813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 62190814 . G . PASS END=62190814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 62190815 . C . PASS END=62190826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr1 62190827 . C . PASS END=62190827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 62190828 . C . PASS END=62190834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:18,0 chr1 62190835 . G . PASS END=62190835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 62190836 . C . PASS END=62190838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 62190839 . A . PASS END=62190839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 62190840 . G . PASS END=62190849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:18,0 chr1 62190850 . G . PASS END=62190851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 62190852 . A . PASS END=62190852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,607:0,54,255:18,0 chr1 62190853 . G . PASS END=62190853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 62190854 . A . PASS END=62190857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,615:0,41,255:18,0 chr1 62190858 . G . PASS END=62190858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 62190859 . C . PASS END=62190859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 62190860 . A . PASS END=62190861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 62190862 . C . PASS END=62190862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 62190863 . A . PASS END=62190863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,735:0,60,255:20,0 chr1 62190864 . G . PASS END=62190864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 62190865 . G . PASS END=62190865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 62190866 . G . PASS END=62190868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 62190869 . A . PASS END=62190869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 62190870 . G . PASS END=62190872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 62190873 . T . PASS END=62190873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,671:0,63,255:21,0 chr1 62190874 . C . PASS END=62190874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 62190875 . T . PASS END=62190879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 62190880 . G . PASS END=62190880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 62190881 . G . PASS END=62190881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 62190882 . G . PASS END=62190882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 62190883 . A . PASS END=62190883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 62190884 . C . PASS END=62190885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 62190886 . T . PASS END=62190886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,759:0,35,255:20,0 chr1 62190887 . C . PASS END=62190888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,782:0,50,255:21,0 chr1 62190889 . C . PASS END=62190890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 62190891 . T . PASS END=62190892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 62190893 . G . PASS END=62190895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1041:0,74,255:26,0 chr1 62190896 . T . PASS END=62190897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 62190898 . G . PASS END=62190919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,824:0,61,255:26,0 chr1 62190920 . G . PASS END=62190920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 62190921 . T . PASS END=62190922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 62190923 . T . PASS END=62190923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 62190924 . T . PASS END=62190924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 62190925 . C . PASS END=62190925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 62190926 . T . PASS END=62190930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,872:0,75,255:25,0 chr1 62190931 . C . PASS END=62190931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 62190932 . C . PASS END=62190932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 62190933 . C . PASS END=62190933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 62190934 . G . PASS END=62190934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 62190935 . T . PASS END=62190935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 62190936 . G . PASS END=62190937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 62190938 . G . PASS END=62190939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 62190940 . C . PASS END=62190945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 62190946 . A . PASS END=62190946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 62190947 . A . PASS END=62190948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 62190949 . C . PASS END=62190973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,613:0,40,255:19,0 chr1 62190974 . T . PASS END=62190978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:38:18:0,38,585:0,38,255:13,0 chr1 62228565 . A . PASS END=62228586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:89:0,120,1800:0,240,255:40,0 chr1 62228685 . A . PASS END=62228851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:37:0,87,1305:0,98,255:40,0 chr1 62231951 . C . PASS END=62231951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 62231952 . T . PASS END=62231952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 62231953 . C . PASS END=62231955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,821:0,66,255:30,0 chr1 62231956 . C . PASS END=62231967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1133:0,93,255:33,0 chr1 62231968 . A . PASS END=62231993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1142:0,88,255:35,0 chr1 62231994 . C . PASS END=62232009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1313:0,108,255:36,0 chr1 62232010 . A . PASS END=62232010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 62232011 . G . PASS END=62232030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1253:0,105,255:37,0 chr1 62232031 . C T, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,18,0:0,17,0:102:190,105,0,1349,105,1349:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,21:0,0,21,14 chr1 62232032 . A . PASS END=62232068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1114:0,88,255:34,0 chr1 62232069 . C . PASS END=62232110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:32:0,81,1215:0,89,255:37,0 chr1 62232111 . A . PASS END=62232137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 62232138 . T . PASS END=62232145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 62234955 . G . PASS END=62234966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1005:0,87,255:29,0 chr1 62234967 . G . PASS END=62234967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 62234968 . A . PASS END=62234970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:30,0 chr1 62234971 . A . PASS END=62234971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 62234972 . T . PASS END=62234972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 62234973 . A . PASS END=62234973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 62234974 . T . PASS END=62234977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:35,0 chr1 62234978 . T . PASS END=62234978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:13:36:0,13,996:0,13,255:31,0 chr1 62234979 . A . PASS END=62234985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1308:0,92,255:35,0 chr1 62234986 . G . PASS END=62234986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1119:0,72,255:33,0 chr1 62234987 . G . PASS END=62235081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:36:0,81,1191:0,91,255:40,0 chr1 62235082 . G . PASS END=62235091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:28:0,60,900:0,84,255:26,0 chr1 62235092 . C . PASS END=62235094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,810:0,42,255:18,0 chr1 62237103 . G . PASS END=62237269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:33:0,87,1305:0,99,255:40,0 chr1 62237270 . G . PASS END=62237270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:28,0 chr1 62237271 . C . PASS END=62237274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:28,0 chr1 62237275 . A . PASS END=62237290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,73,255:25,0 chr1 62237291 . C . PASS END=62237298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,52,255:18,0 chr1 62240878 . G . PASS END=62241006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:36:0,84,1260:0,96,255:40,0 chr1 62253426 . G . PASS END=62253433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 62253434 . A . PASS END=62253452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,829:0,66,255:24,0 chr1 62253453 . A . PASS END=62253453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:22,0 chr1 62253454 . T . PASS END=62253461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr1 62253462 . A . PASS END=62253462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 62253463 . T . PASS END=62253475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,804:0,69,255:25,0 chr1 62253476 . C . PASS END=62253480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 62253481 . A . PASS END=62253492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1008:0,78,255:26,0 chr1 62253493 . G . PASS END=62253507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 62253508 . A . PASS END=62253520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 62253521 . C . PASS END=62253526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 62253527 . G . PASS END=62253527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 62253528 . A . PASS END=62253535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 62253536 . C . PASS END=62253537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 62253538 . G . PASS END=62253578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1202:0,86,255:33,0 chr1 62253579 . A . PASS END=62253579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:25,2 chr1 62253580 . C . PASS END=62253580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1210:0,36,255:26,2 chr1 62253581 . C . PASS END=62253581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:27,0 chr1 62253582 . C . PASS END=62253605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1155:0,90,255:30,0 chr1 62253606 . G . PASS END=62253620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 62253621 . G . PASS END=62253644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,44,255:19,0 chr1 62257020 . G . PASS END=62257119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:42:0,102,1530:0,126,255:40,0 chr1 62261139 . G . PASS END=62261167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,104,1221:0,104,255:40,0 chr1 62261168 . A G, 194.47 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,22,0:0,27,0:144:232,147,0,1884,147,1884:255,147,0:0,0:1.9447e+02,1.4447e+02,0.0000e+00,4.5000e+02,1.7924e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,26:0,0,24,25 chr1 62261169 . T . PASS END=62261205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,147,255:40,0 chr1 62261206 . T . PASS END=62261230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,133,255:40,0 chr1 62262959 . G . PASS END=62263090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1133:0,81,255:40,0 chr1 62263091 . T . PASS END=62263100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:28:0,72,1080:0,84,255:26,0 chr1 62267295 . G . PASS END=62267441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:30:0,87,1094:0,90,255:40,0 chr1 62271120 . A . PASS END=62271196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,149,255:40,0 chr1 62274146 . G . PASS END=62274202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:80:0,120,1800:0,202,255:40,0 chr1 62288617 . C . PASS END=62288751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:37:0,95,1299:0,95,255:40,0 chr1 62293094 . G . PASS END=62293228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:33:0,81,1215:0,99,255:40,0 chr1 62293229 . A . PASS END=62293242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,945:0,81,255:25,0 chr1 62293243 . T . PASS END=62293243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:21,0 chr1 62293244 . C . PASS END=62293253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 62293254 . A . PASS END=62293255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 62299030 . A . PASS END=62299049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,185,255:40,0 chr1 62299326 . G . PASS END=62299457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:57:0,120,1800:0,138,255:40,0 chr1 62321702 . G . PASS END=62321911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1111:0,89,255:40,0 chr1 62327223 . G . PASS END=62327339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,153,255:40,0 chr1 62329910 . G . PASS END=62329910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 62329911 . G . PASS END=62329931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1233:0,86,255:37,0 chr1 62329932 . T . PASS END=62330042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,111,1330:0,113,255:40,0 chr1 62330043 . C . PASS END=62330079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:62:0,120,1800:0,169,255:40,0 chr1 62330080 . T G, 235.67 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,29,0:0,34,0:186:273,189,0,2351,189,2351:255,192,0:0,0:2.3567e+02,1.8567e+02,0.0000e+00,4.5000e+02,2.2044e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,31:0,0,30,33 chr1 62330081 . C . PASS END=62330117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,144,255:40,0 chr1 62330118 . C . PASS END=62330275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,99,255:40,0 chr1 62330276 . C . PASS END=62330289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:25:0,66,990:0,75,255:24,0 chr1 62330290 . T . PASS END=62330291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 62330292 . G . PASS END=62330305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,854:0,72,255:24,0 chr1 62340915 . A . PASS END=62341038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:34:0,85,1119:0,85,255:40,0 chr1 62349909 . G . PASS END=62350059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:32:0,89,1144:0,89,255:40,0 chr1 62350060 . T . PASS END=62350060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:35,0 chr1 62350061 . A . PASS END=62350072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:37:0,81,1215:0,86,255:36,0 chr1 62350073 . G . PASS END=62350074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:63:37:0,63,945:0,78,255:21,0 chr1 62350075 . T . PASS END=62350075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1155:0,36,255:19,0 chr1 62350076 . A . PASS END=62350076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,108,255:20,0 chr1 62350077 . C . PASS END=62350080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:39:32:0,39,585:0,41,255:13,0 chr1 62365255 . T . PASS END=62365326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,111,1665:0,111,255:40,0 chr1 62366954 . T . PASS END=62367131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:88:35:0,88,1061:0,88,255:40,0 chr1 62374044 . G . PASS END=62374051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 62374052 . A . PASS END=62374052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 62374053 . G . PASS END=62374053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 62374054 . T . PASS END=62374054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 62374055 . A . PASS END=62374135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:29:0,87,1094:0,87,255:40,0 chr1 62374136 . T . PASS END=62374136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1069:0,77,255:33,0 chr1 62374137 . T . PASS END=62374144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:32,0 chr1 62374145 . C . PASS END=62374154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:27:0,75,1125:0,81,255:26,0 chr1 62380259 . G . PASS END=62380259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:33,0 chr1 62380260 . T . PASS END=62380260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:32,0 chr1 62380261 . C . PASS END=62380269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1083:0,85,255:40,0 chr1 62380270 . C T, 37.63 PASS DP=42;MQ=249.64;MQRankSum=4.301;ReadPosRankSum=0.182;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,13,0:0.317,0.000:41:19,5,0:9,8,0:38:72,0,50,436,1002,1438:255,0,255:28,0:3.7632e+01,7.7095e-04,5.3001e+01,4.3623e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,12,4,9:13,15,6,7 chr1 62380271 . G . PASS END=62380297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,115,1800:0,115,255:40,0 chr1 62380298 . G A, 41.90 PASS DP=57;MQ=249.74;MQRankSum=6.044;ReadPosRankSum=-1.850;FractionInformativeReads=0.965;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,19,0:0.345,0.000:55:24,7,0:12,12,0:42:77,0,50,643,1165,1808:255,0,255:36,0:4.1897e+01,3.0236e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,17,8,11:13,23,10,9 chr1 62380299 . G . PASS END=62380335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,104,1690:0,104,255:40,0 chr1 62380336 . G . PASS END=62380336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr1 62393402 . A . PASS END=62393402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1263:0,75,255:33,0 chr1 62393403 . G . PASS END=62393404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1620:0,111,255:37,0 chr1 62393405 . C . PASS END=62393405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 62393406 . A . PASS END=62393431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,101,1372:0,101,255:40,0 chr1 62393432 . C . PASS END=62393501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,102,1584:0,102,255:40,0 chr1 62418062 . A . PASS END=62418083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,191,255:40,0 chr1 62455840 . A . PASS END=62455852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 62455853 . A . PASS END=62455862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,869:0,66,255:26,0 chr1 62455863 . G . PASS END=62455976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:27:0,81,994:0,81,255:40,0 chr1 62455977 . A . PASS END=62456013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:36:0,87,1305:0,92,255:40,0 chr1 62456014 . G A, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.863;ReadPosRankSum=2.802;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,18,0:0.545,0.000:33:6,6,0:9,12,0:48:85,0,49,615,537,1152:255,0,255:14,0:5.0000e+01,6.7822e-05,5.2483e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,12,7,11:8,7,7,11 chr1 62456015 . T . PASS END=62456022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1194:0,83,255:30,0 chr1 62456023 . A . PASS END=62456023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 62456024 . T . PASS END=62456024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 62456025 . G . PASS END=62456025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 62456026 . A . PASS END=62456026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 62456027 . A . PASS END=62456047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,947:0,71,255:25,0 chr1 62456048 . G A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=-1.333;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:6,3,0:7,10,0:48:85,0,50,465,465,930:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,4,9:7,6,10,3 chr1 62456049 . T . PASS END=62456051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 62456717 . C . PASS END=62456740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr1 62457154 . A . PASS END=62457189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:82:0,120,1800:0,223,255:40,0 chr1 62479015 . T . PASS END=62479015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 62479016 . C . PASS END=62479018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 62479019 . T . PASS END=62479019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 62479020 . T . PASS END=62479022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 62479023 . A . PASS END=62479024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,766:0,44,255:22,0 chr1 62479025 . G . PASS END=62479026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:24,0 chr1 62479027 . C . PASS END=62479027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,923:0,50,255:25,0 chr1 62479028 . T . PASS END=62479028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 62479029 . G . PASS END=62479039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1196:0,84,255:33,0 chr1 62479040 . T . PASS END=62479055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:94:35:0,94,1304:0,94,255:39,0 chr1 62479056 . G . PASS END=62479056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1394:0,68,255:38,0 chr1 62479057 . C . PASS END=62479182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:39:0,87,1305:0,96,255:40,0 chr1 62483528 . A . PASS END=62483619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,135,255:40,0 chr1 62503649 . A . PASS END=62503721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,137,255:40,0 chr1 62504146 . G . PASS END=62504147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1047:0,71,255:29,0 chr1 62504148 . T . PASS END=62504148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:27,0 chr1 62504149 . T . PASS END=62504153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:32,0 chr1 62504154 . A . PASS END=62504154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 62504155 . G . PASS END=62504157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:32,0 chr1 62504162 . G . PASS END=62504162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 62504163 . A . PASS END=62504163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:28,0 chr1 62504164 . T . PASS END=62504165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 62504166 . A T, 45.20 PASS DP=31;MQ=249.50;MQRankSum=4.521;ReadPosRankSum=0.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,11,0:0.355,0.000:31:12,10,0:8,1,0:44:80,0,47,180,180,180:255,0,255:20,0:4.5201e+01,1.7447e-04,5.0000e+01,1.7997e+02,2.1474e+02,1.8298e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,7,5,6:9,11,4,7 chr1 62504167 . A . PASS END=62504167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 62504168 . G T, 50.00 PASS DP=31;MQ=249.50;MQRankSum=4.067;ReadPosRankSum=-0.186;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,20,0:0.645,0.000:31:10,12,0:1,8,0:44:85,0,42,185,185,185:255,0,255:10,0:5.0000e+01,1.7447e-04,4.5201e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,6,13,7:4,7,9,11 chr1 62504169 . A . PASS END=62504169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:29,0 chr1 62504170 . A . PASS END=62504174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 62504175 . G . PASS END=62504175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 62504176 . T . PASS END=62504177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 62504178 . A . PASS END=62504179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 62504180 . C . PASS END=62504193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,916:0,89,255:31,0 chr1 62504194 . A G, 41.57 PASS DP=31;MQ=249.50;MQRankSum=4.416;ReadPosRankSum=0.317;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,10,0:0.323,0.000:31:12,9,0:9,1,0:41:76,0,50,358,714,1072:255,0,255:19,0:4.1571e+01,3.2436e-04,5.3000e+01,3.5780e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,2,8:8,13,1,9 chr1 62504195 . G . PASS END=62504199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 62504200 . G . PASS END=62504202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 62516638 . G . PASS END=62516645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1474:0,107,255:40,0 chr1 62516646 . C . PASS END=62516682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,120,1800:0,121,255:40,0 chr1 62516683 . G C, 208.60 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,26,0:0,28,0:159:246,162,0,2027,162,2027:255,162,0:0,0:2.0860e+02,1.5860e+02,0.0000e+00,4.5000e+02,1.9337e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,25:0,0,31,23 chr1 62516684 . T . PASS END=62516720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,103,1682:0,103,255:40,0 chr1 62516721 . C . PASS END=62516729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:44:0,105,1533:0,105,255:40,0 chr1 62516730 . G . PASS END=62516730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1520:0,77,255:37,0 chr1 62538693 . G . PASS END=62538767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,150,255:40,0 chr1 62545122 . G . PASS END=62545122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 62545123 . C . PASS END=62545239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:37:0,84,1260:0,104,255:40,0 chr1 62550187 . G . PASS END=62550278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1049:0,80,255:34,0 chr1 62550279 . G . PASS END=62550279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 62550280 . G . PASS END=62550282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 62550283 . T . PASS END=62550306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,922:0,69,255:24,0 chr1 62550307 . A . PASS END=62550320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:17,0 chr1 62565991 . T . PASS END=62565999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr1 62566000 . C . PASS END=62566001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 62566002 . G . PASS END=62566009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:18,0 chr1 62566010 . C . PASS END=62566010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 62566011 . A . PASS END=62566013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 62566014 . A . PASS END=62566014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,474:0,10,255:17,0 chr1 62566015 . G . PASS END=62566015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 62566016 . C . PASS END=62566017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr1 62566018 . T . PASS END=62566044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:25,0 chr1 62566045 . A . PASS END=62566059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1064:0,84,255:30,0 chr1 62566060 . G . PASS END=62566060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 62566061 . T . PASS END=62566080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1119:0,90,255:30,0 chr1 62574109 . A . PASS END=62574192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,105,1575:0,117,255:40,0 chr1 62579725 . G . PASS END=62579726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 62579727 . T . PASS END=62579727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:34,0 chr1 62579728 . A . PASS END=62579731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1340:0,92,255:35,0 chr1 62579732 . G . PASS END=62579732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr1 62579733 . G . PASS END=62579785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:38:0,97,1230:0,97,255:40,0 chr1 62579786 . C . PASS END=62579822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1340:0,92,255:37,0 chr1 62579823 . G A, 148.87 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,19,0:0,15,0:99:187,102,0,1289,102,1289:255,102,0:0,0:1.4887e+02,9.8871e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,21:0,0,14,20 chr1 62579824 . G . PASS END=62579860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1186:0,83,255:34,0 chr1 62579861 . C . PASS END=62579883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1296:0,93,255:35,0 chr1 62579884 . G . PASS END=62579884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 62579885 . G . PASS END=62579887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 62579888 . G . PASS END=62579913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 62579914 . A . PASS END=62579918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:22:0,51,765:0,53,255:17,0 chr1 62582204 . A . PASS END=62582333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:38:0,96,1372:0,98,255:40,0 chr1 62582334 . G . PASS END=62582334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:32,0 chr1 62582335 . T . PASS END=62582345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,92,255:34,0 chr1 62582346 . C . PASS END=62582351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 62582804 . T . PASS END=62582917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,108,1569:0,111,255:40,0 chr1 62586853 . G . PASS END=62586940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1133:0,81,255:40,1 chr1 62586941 . T . PASS END=62586941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:33,0 chr1 62586942 . T . PASS END=62586966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1249:0,89,255:35,0 chr1 62586967 . G . PASS END=62586967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 62588693 . G . PASS END=62588730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:97:0,120,1800:0,255,255:40,0 chr1 62593644 . G . PASS END=62593644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:31,0 chr1 62593645 . A . PASS END=62593766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1163:0,80,255:40,0 chr1 62594513 . G . PASS END=62594526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1053:0,85,255:34,0 chr1 62594527 . T . PASS END=62594527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 62594528 . G . PASS END=62594555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1235:0,91,255:36,0 chr1 62594556 . G . PASS END=62594590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:35,0 chr1 62594591 . A . PASS END=62594592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 62594593 . C T, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,12,0:0,16,0:81:169,84,0,1086,84,1086:255,84,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,18:0,0,12,16 chr1 62594594 . G . PASS END=62594615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 62594616 . A . PASS END=62594616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 62594617 . G . PASS END=62594617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 62613956 . G . PASS END=62614062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1305:0,95,255:40,0 chr1 62619030 . A . PASS END=62619153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:49:0,114,1710:0,122,255:40,0 chr1 62626580 . G . PASS END=62626726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:96:43:0,96,1440:0,112,255:40,0 chr1 62672301 . A . PASS END=62672346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:40:0,108,1495:0,108,255:40,0 chr1 62672347 . C . PASS END=62672388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,108,1620:0,117,255:40,0 chr1 62672389 . T TAACAGA, 50.00 PASS DP=77;MQ=250.00;MQRankSum=7.281;ReadPosRankSum=-0.197;FractionInformativeReads=0.935;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,38,0:0.528,0.000:72:15,20,0:19,18,0:48:79,0,50,1596,3556,5151:255,0,255:34,49:5.0000e+01,6.6527e-05,5.2747e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,29.00,32.00,34.77,63.77,37.77:20,14,22,16:17,17,18,20 chr1 62672390 . A . LowGQ END=62672390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,34:77:0:77:0,0,327:255,0,255:40,0 chr1 62672391 . A . PASS END=62672432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:70:0,120,1800:0,172,255:40,1 chr1 62672433 . T . PASS END=62672508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,165,255:40,0 chr1 62672509 . G . PASS END=62672515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,119,1800:0,119,255:40,0 chr1 62672516 . T . LowGQ END=62672516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,11:66:0:66:0,0,1591:7,0,255:40,0 chr1 62672517 . C . PASS END=62672545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:64:0,120,1800:0,182,255:40,0 chr1 62672546 . G A, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.771;ReadPosRankSum=0.297;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,35,0:0.556,0.000:63:13,17,0:15,18,0:47:85,0,46,185,185,185:255,0,255:26,0:5.0000e+01,9.4744e-05,4.9279e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,15,24,11:18,10,20,15 chr1 62672547 . G . PASS END=62672583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,156,255:40,0 chr1 62672584 . A . PASS END=62672999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:45:0,105,1571:0,105,255:40,0 chr1 62673000 . A . PASS END=62673020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:56:0,120,1800:0,152,255:40,0 chr1 62673021 . G . PASS END=62673021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,10:63:22:63:0,22,1493:0,22,255:40,0 chr1 62673022 . C . PASS END=62673036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,152,255:40,0 chr1 62673037 . T C, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.209;ReadPosRankSum=3.029;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,29,0:0.547,0.000:53:13,11,0:11,18,0:48:85,0,49,1008,822,1830:255,0,255:22,0:5.0000e+01,6.9375e-05,5.2231e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,8,13,16:15,9,13,16 chr1 62673038 . A . PASS END=62673074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,147,255:40,0 chr1 62673075 . C . PASS END=62673187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:63:0,120,1800:0,157,255:40,0 chr1 62673188 . G . PASS END=62673224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,188,255:40,0 chr1 62673225 . G A, 48.16 PASS DP=68;MQ=250.00;MQRankSum=7.006;ReadPosRankSum=4.278;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,29,0:0.426,0.000:68:15,15,0:24,14,0:47:83,0,50,1000,1321,2321:255,0,255:34,0:4.8164e+01,8.8013e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,26,13,16:19,20,13,16 chr1 62673226 . T . PASS END=62673262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:59:0,120,1800:0,160,255:40,0 chr1 62673263 . A . PASS END=62673308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:54:0,120,1800:0,154,255:40,0 chr1 62675455 . G . PASS END=62675456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 62675457 . T . PASS END=62675461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:18,0 chr1 62675462 . C . PASS END=62675463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:23,0 chr1 62675464 . C . PASS END=62675465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 62675466 . A . PASS END=62675468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 62675469 . A . PASS END=62675469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:24,0 chr1 62675470 . G . PASS END=62675470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 62675471 . A . PASS END=62675656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:27:0,81,992:0,81,255:40,2 chr1 62675657 . A . PASS END=62675657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:54:57:0,54,1841:0,54,255:40,2 chr1 62675658 . G . PASS END=62676497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:40:0,90,1346:0,90,255:40,0 chr1 62676498 . A . PASS END=62676534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,131,255:40,0 chr1 62676535 . T . LowGQ END=62676535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,12:73:0:73:0,0,1681:120,0,255:40,0 chr1 62676536 . C . PASS END=62676572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,126,255:40,0 chr1 62676573 . A . PASS END=62677037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:37:0,84,1260:0,101,255:40,0 chr1 62677038 . A . PASS END=62677044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr1 62703949 . C . PASS END=62703966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,653:0,41,255:18,0 chr1 62703967 . G . PASS END=62704020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,759:0,66,255:25,0 chr1 62704021 . C . PASS END=62704049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,596:0,48,255:18,0 chr1 62704050 . C . PASS END=62704053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 62713144 . C . PASS END=62713145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,178:0,15,178:5,0 chr1 62713146 . T . PASS END=62713147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 62713148 . T . PASS END=62713149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,217:0,18,217:6,0 chr1 62713150 . A . PASS END=62713150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 62713151 . G . PASS END=62713159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:6,0 chr1 62713160 . C . PASS END=62713160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 62713161 . T . PASS END=62713161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 62713162 . G . PASS END=62713162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 62713163 . T . LowGQ END=62713163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:18,0,204:6,0 chr1 62713164 . C . PASS END=62713177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr1 62713178 . G . PASS END=62713186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 62713187 . A . PASS END=62713201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:13,0 chr1 62713202 . A . PASS END=62713202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 62713203 . C . PASS END=62713204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 62713205 . T . PASS END=62713207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 62713208 . C . PASS END=62713208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 62713209 . C . PASS END=62713223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,550:0,45,255:19,0 chr1 62713224 . C G, 47.29 PASS DP=19;MQ=249.48;MQRankSum=2.493;ReadPosRankSum=0.972;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:5,4,0:7,3,0:46:82,0,50,250,400,651:206,0,255:12,0:4.7293e+01,1.0277e-04,5.3000e+01,2.5036e+02,4.3531e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,1,4,3:6,6,5,2 chr1 62713225 . C . PASS END=62713240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,706:0,44,255:19,0 chr1 62713241 . C . PASS END=62713245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 62713246 . G A, 47.39 PASS DP=21;MQ=249.53;MQRankSum=2.788;ReadPosRankSum=1.267;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,8,0:0.381,0.000:21:5,3,0:8,5,0:46:82,0,50,286,457,743:225,0,255:12,0:4.7394e+01,1.0096e-04,5.3000e+01,2.8605e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,1,3,5:4,9,6,2 chr1 62713247 . T . PASS END=62713259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:22,0 chr1 62713260 . T . PASS END=62713261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 62713262 . A . PASS END=62713278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,726:0,66,255:22,0 chr1 62713279 . A . PASS END=62713279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 62713280 . A . PASS END=62713283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 62713284 . G . PASS END=62713303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,968:0,75,255:26,0 chr1 62713304 . C . PASS END=62713306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 62713307 . T . PASS END=62713323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,823:0,69,255:23,0 chr1 62713324 . C . PASS END=62713324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 62713325 . A . PASS END=62713330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 62713331 . G . PASS END=62713331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 62713332 . C . PASS END=62713332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 62713333 . A . PASS END=62713334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 62713335 . T . PASS END=62713335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:18,0 chr1 62713336 . C . PASS END=62713344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:18,0 chr1 62718739 . C . PASS END=62718876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1215:0,84,255:40,0 chr1 62718877 . G . PASS END=62718881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:25,0 chr1 62728764 . C . PASS END=62728765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 62728766 . G . PASS END=62728767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 62728768 . C . PASS END=62728768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 62728769 . T . PASS END=62728783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 62728784 . A G, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=1.631;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,12,0:0.522,0.000:23:3,6,0:8,6,0:48:85,0,50,429,394,823:255,0,255:11,0:5.0000e+01,6.5751e-05,5.2906e+01,4.2904e+02,4.2828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,9,3:6,5,7,5 chr1 62728785 . C . PASS END=62728792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 62728793 . A . PASS END=62728793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 62728794 . A . PASS END=62728801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 62728802 . T . PASS END=62728802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 62728803 . G . PASS END=62728805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:24,0 chr1 62728806 . A . PASS END=62728806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 62728807 . C . PASS END=62728807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 62728808 . A . PASS END=62728808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 62728809 . C . PASS END=62728809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 62728810 . G . PASS END=62728810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 62728811 . C . PASS END=62728820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 62728821 . G . PASS END=62728831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:31,0 chr1 62728832 . C . PASS END=62728832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 62728833 . C . PASS END=62728837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1172:0,83,255:32,0 chr1 62728838 . T C, 49.93 PASS DP=33;MQ=249.76;MQRankSum=4.881;ReadPosRankSum=2.251;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:17,16,0:0.485,0.000:33:6,7,0:11,9,0:48:85,0,50,535,579,1115:255,0,255:17,0:4.9929e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,8,8:8,9,7,9:62728838 chr1 62728839 . G . PASS END=62728860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:34,0 chr1 62728861 . T C, 50.00 PASS DP=37;MQ=249.79;MQRankSum=5.181;ReadPosRankSum=1.018;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:18,19,0:0.514,0.000:37:7,8,0:11,11,0:48:85,0,50,651,640,1291:255,0,255:16,0:5.0000e+01,6.5492e-05,5.2966e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,10,9:9,9,9,10:62728838 chr1 62728862 . T . PASS END=62728917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1296:0,91,255:35,0 chr1 62728918 . G A, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=2.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,19,0:0.559,0.000:34:7,5,0:8,14,0:48:85,0,49,680,537,1216:255,0,255:13,0:5.0000e+01,7.0928e-05,5.1979e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,11,9,10:8,7,9,10 chr1 62728919 . G . PASS END=62728951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:33,0 chr1 62728952 . C . PASS END=62728955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 62728956 . C . PASS END=62728956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 62728957 . T . PASS END=62728966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 62728967 . G . PASS END=62728967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:19,0 chr1 62728968 . T . PASS END=62728970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr1 62728971 . T . PASS END=62728977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 62728978 . T . PASS END=62728983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 62732404 . C . PASS END=62732491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,110,1480:0,110,255:40,0 chr1 62733959 . C . PASS END=62733964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 62733965 . G . PASS END=62733976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:17,0 chr1 62733977 . G . PASS END=62733980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:17,0 chr1 62733981 . C . PASS END=62733987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 62733988 . C . PASS END=62733988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 62733989 . C . PASS END=62734009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:26,0 chr1 62734010 . G . PASS END=62734177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:82:28:0,82,1003:0,82,255:40,0 chr1 62737150 . C . PASS END=62737261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,109,1631:0,109,255:40,0 chr1 62738876 . C . PASS END=62738882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr1 62738883 . C . PASS END=62738883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 62738884 . G . PASS END=62738887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 62738888 . A . PASS END=62738888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 62738889 . G . PASS END=62738903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 62738904 . T C, 46.71 PASS DP=24;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=2.266;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:4,4,0:11,5,0:46:81,0,50,322,537,858:255,0,255:15,0:4.6706e+01,1.1442e-04,5.3000e+01,3.2178e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,5,4:10,5,2,7 chr1 62738905 . G . PASS END=62738908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 62738909 . C . PASS END=62738914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 62738915 . G . PASS END=62738916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 62738917 . G . PASS END=62738919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 62738920 . T . PASS END=62738921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 62738922 . A . PASS END=62738941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 62738942 . A . PASS END=62738943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 62738944 . A . PASS END=62738944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 62738945 . G . PASS END=62738946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 62738947 . A . PASS END=62738947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 62738948 . G . PASS END=62738948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:28,0 chr1 62738949 . C . PASS END=62738953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 62738954 . T . PASS END=62738966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 62738967 . C . PASS END=62738969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 62738970 . C . PASS END=62738979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:25,0 chr1 62738980 . A . PASS END=62738980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 62738981 . T . PASS END=62738998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr1 62738999 . C . PASS END=62738999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 62739000 . T . PASS END=62739014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 62739015 . G . PASS END=62739017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 62739018 . G . PASS END=62739030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 62739031 . T . PASS END=62739032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 62739033 . C . PASS END=62739055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 62739056 . G . PASS END=62739056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 62739057 . C . PASS END=62739060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 62739061 . T . PASS END=62739067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,723:0,49,255:19,0 chr1 62739068 . G . PASS END=62739079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 62739080 . T . PASS END=62739080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:19,0 chr1 62739081 . C . PASS END=62739109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,939:0,68,255:25,0 chr1 62739110 . T . PASS END=62739110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 62739111 . T . PASS END=62739117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr1 62739118 . C . PASS END=62739118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 62739119 . T . PASS END=62739151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,892:0,62,255:26,0 chr1 62739152 . G . PASS END=62739153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr1 62739154 . T . PASS END=62739154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 62739155 . T . PASS END=62739155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:23,0 chr1 62739156 . G . PASS END=62739160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,933:0,67,255:25,0 chr1 62739161 . T . PASS END=62739175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,962:0,67,255:25,0 chr1 62739176 . C . PASS END=62739180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 62739181 . G . PASS END=62739181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 62739182 . G . PASS END=62739184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 62739185 . G . PASS END=62739185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 62739186 . A . PASS END=62739197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1001:0,84,255:29,0 chr1 62739198 . G A, 48.07 PASS DP=30;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=1.793;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:3,5,0:14,7,0:47:83,0,50,392,571,963:255,0,255:17,0:4.8071e+01,8.9566e-05,5.3000e+01,3.9233e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,5,7:9,8,4,8 chr1 62739199 . C . PASS END=62739205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 62739206 . A . PASS END=62739218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,71,255:24,0 chr1 62739219 . T . PASS END=62739219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 62739220 . G . PASS END=62739233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 62739234 . T . PASS END=62739234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 62739235 . C . PASS END=62739235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 62739236 . C . PASS END=62739299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,784:0,63,255:25,0 chr1 62739300 . A . PASS END=62739301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 62739302 . G . PASS END=62739304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 62739305 . C . PASS END=62739367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,566:0,48,255:19,0 chr1 62739368 . C . PASS END=62739408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,737:0,60,255:26,0 chr1 62739409 . C . PASS END=62739416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 62739417 . G . PASS END=62739417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 62739418 . C . PASS END=62739418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 62739419 . C . PASS END=62739420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,911:0,67,255:27,0 chr1 62739421 . T . PASS END=62739427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 62739428 . C . PASS END=62739428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 62739429 . T . PASS END=62739507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1155:0,80,255:36,0 chr1 62739508 . A . PASS END=62739508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:34,0 chr1 62739509 . A . PASS END=62739510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 62739511 . A . PASS END=62739511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1036:0,61,255:29,0 chr1 62739512 . G . PASS END=62739669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:35:0,87,1336:0,87,255:40,0 chr1 62739670 . G . PASS END=62739672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:78:46:0,78,1170:0,122,255:26,0 chr1 62739673 . G . PASS END=62739709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1091:0,86,255:35,0 chr1 62739710 . A . PASS END=62739710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1225:0,74,255:31,0 chr1 62739711 . C . PASS END=62739711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 62739712 . T . PASS END=62739712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1050:0,71,255:30,0 chr1 62739713 . C . PASS END=62739717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1257:0,89,255:33,0 chr1 62739718 . T . PASS END=62739718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr1 62739719 . C . PASS END=62739746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1097:0,85,255:34,0 chr1 62739747 . G . PASS END=62739753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 62739754 . C . PASS END=62739764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 62739765 . C . PASS END=62739765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 62739766 . A . PASS END=62739771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 62739772 . G . PASS END=62739772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 62739773 . C . PASS END=62739773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 62739774 . A . PASS END=62739786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:23,0 chr1 62739787 . T . PASS END=62739802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,706:0,57,255:19,0 chr1 62739803 . T . PASS END=62739812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 62739813 . T . PASS END=62739821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 62739822 . C . PASS END=62739823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:22:0,36,540:0,66,255:12,0 chr1 62739824 . C . PASS END=62739836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:40:19:0,40,635:0,40,255:17,0 chr1 62739837 . C . PASS END=62739838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 62739839 . G . PASS END=62739844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 62739845 . G . PASS END=62739851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,738:0,60,255:21,0 chr1 62739852 . G . PASS END=62739852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 62739853 . C . PASS END=62739856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 62739857 . T . PASS END=62739857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 62739858 . G . PASS END=62739887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,801:0,69,255:24,0 chr1 62739888 . A . PASS END=62739888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 62739889 . T . PASS END=62739905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,990:0,65,255:26,0 chr1 62739906 . T . PASS END=62739936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1202:0,84,255:32,0 chr1 62739937 . C . PASS END=62739937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 62739938 . C . PASS END=62739946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:32,0 chr1 62739947 . A . PASS END=62739947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1255:0,75,255:31,0 chr1 62739948 . C . PASS END=62739954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1164:0,85,255:33,0 chr1 62739955 . T . PASS END=62739955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:32,0 chr1 62739956 . C . PASS END=62739974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:36:0,94,1183:0,94,255:36,0 chr1 62739975 . T . PASS END=62739975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:33,0 chr1 62739976 . T . PASS END=62740027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1203:0,91,255:37,0 chr1 62740028 . G . PASS END=62740044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1305:0,96,255:34,0 chr1 62740045 . T . PASS END=62740054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:25,0 chr1 62740055 . C . PASS END=62740055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:21,0 chr1 62740056 . C . PASS END=62740064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:23,0 chr1 62740065 . A G, 49.92 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=1.659;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:2,4,0:11,8,0:48:85,0,50,429,465,894:255,0,255:12,0:4.9915e+01,6.6010e-05,5.3000e+01,4.2858e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,3,9:9,4,9,3 chr1 62740066 . C . PASS END=62740075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,825:0,61,255:22,0 chr1 62740076 . G . PASS END=62740076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:19,0 chr1 62740077 . C . PASS END=62740077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 62740078 . T . PASS END=62740080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 62740081 . G . PASS END=62740082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 62740083 . T . PASS END=62740094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 62740095 . C . PASS END=62740102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:22,0 chr1 62740103 . G . PASS END=62740111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 62740112 . T . PASS END=62740112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,754:0,42,255:20,0 chr1 62740113 . T . PASS END=62740115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 62740116 . T . PASS END=62740116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 62740117 . G . PASS END=62740128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 62740129 . G . PASS END=62740132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 62740133 . T . PASS END=62740133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:17,0 chr1 62740134 . G . PASS END=62740135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 62740136 . G . PASS END=62740156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,756:0,63,255:22,0 chr1 62740157 . C . PASS END=62740159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 62740160 . G . PASS END=62740187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 62740188 . T . PASS END=62740189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr1 62740190 . C . PASS END=62740214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,861:0,63,255:24,0 chr1 62740215 . A . PASS END=62740215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 62740216 . G . PASS END=62740222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr1 62740223 . G . PASS END=62740223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 62740224 . G . PASS END=62740232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 62740233 . G . PASS END=62740235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 62740236 . C . PASS END=62740309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 62740310 . G . PASS END=62740320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 62740321 . A . PASS END=62740321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 62740322 . A . PASS END=62740327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:27,0 chr1 62740328 . G . PASS END=62740382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,917:0,62,255:26,0 chr1 62740383 . A . PASS END=62740383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 62740384 . G . PASS END=62740399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 62740400 . T . PASS END=62740402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 62740403 . C . PASS END=62740404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 62740405 . T . PASS END=62740408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 62740409 . T . PASS END=62740409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 62740410 . C . PASS END=62740412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 62740413 . G . PASS END=62740413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 62740414 . C . PASS END=62740432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 62740433 . C . PASS END=62740433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 62740434 . A . PASS END=62740437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 62740438 . C . PASS END=62740445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:22:0,57,855:0,66,255:19,0 chr1 62740446 . T C, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=2.457;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,10,0:0.500,0.000:20:6,2,0:4,8,0:47:85,0,47,185,185,185:255,0,255:10,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,6,4,6:6,4,4,6:62740446 chr1 62740447 . G . PASS END=62740448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 62740449 . T C, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=2.457;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,10,0:0.500,0.000:20:6,2,0:4,8,0:47:85,0,47,185,185,185:255,0,255:10,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,6,4,6:6,4,4,6:62740446 chr1 62740450 . G . PASS END=62740456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 62740457 . T . PASS END=62740466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 62740467 . T . PASS END=62740467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 62740468 . G . PASS END=62740468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 62740469 . T . PASS END=62740469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 62740470 . C . PASS END=62740479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:21,0 chr1 62740480 . G . PASS END=62740480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 62740481 . C . PASS END=62740481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 62740482 . C . PASS END=62740490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,47,255:19,0 chr1 62740491 . C . PASS END=62740504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:13:0,36,482:0,39,255:13,0 chr1 62740505 . A . PASS END=62740505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 62740506 . G . PASS END=62740506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 62740507 . T . PASS END=62740508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,425:0,25,255:11,0 chr1 62740509 . T . PASS END=62740517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 62740518 . C . PASS END=62740519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 62740520 . G . PASS END=62740542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr1 62740543 . C . PASS END=62740543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 62740544 . T . PASS END=62740546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 62740547 . C . PASS END=62740552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 62740553 . G . PASS END=62740553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 62740554 . G . PASS END=62740554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 62740555 . C . PASS END=62740559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:16,0 chr1 62740560 . G . PASS END=62740560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 62740561 . T . PASS END=62740567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 62740568 . G . PASS END=62740569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,596:0,35,255:16,0 chr1 62740570 . A . PASS END=62740571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 62740572 . A . PASS END=62740572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 62740573 . G . PASS END=62740588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,637:0,40,255:19,0 chr1 62740589 . G . PASS END=62740592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 62740593 . G . PASS END=62740594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 62740595 . C . PASS END=62740599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:24,0 chr1 62740600 . C . PASS END=62740600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 62740601 . T . PASS END=62740606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,969:0,65,255:26,0 chr1 62740607 . T . PASS END=62740611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 62740612 . A . PASS END=62740612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 62740613 . T . PASS END=62740615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 62740616 . T . PASS END=62740616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 62740617 . T . PASS END=62740621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 62740622 . T . PASS END=62740623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 62740624 . G . PASS END=62740624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 62740625 . T . PASS END=62740625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 62740626 . G . PASS END=62740730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:29:0,83,1057:0,83,255:40,0 chr1 62740731 . T . PASS END=62740740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,95,255:35,0 chr1 62740741 . T . PASS END=62740752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,72,255:26,0 chr1 62740753 . T . PASS END=62740753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,909:0,45,255:23,0 chr1 62740754 . C . PASS END=62740759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:22,0 chr1 62747221 . C . PASS END=62747236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,188,255:40,0 chr1 62905539 . A . PASS END=62905708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:90:30:0,90,1103:0,90,255:40,2 chr1 62907159 . T . PASS END=62907279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:56:0,120,1800:0,141,255:40,0 chr1 62907866 . G . PASS END=62907882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:73:0,120,1800:0,218,255:40,0 chr1 62907883 . C G, 48.02 PASS DP=80;MQ=250.00;MQRankSum=7.606;ReadPosRankSum=5.007;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,34,0:0.425,0.000:80:21,19,0:25,15,0:47:83,0,50,1187,1600,2788:255,0,255:40,0:4.8023e+01,9.0084e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,13,24,10:26,20,19,15 chr1 62907884 . G . PASS END=62907920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:81:0,120,1800:0,230,255:40,0 chr1 62907921 . T . PASS END=62907970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:82:0,120,1800:0,230,255:40,0 chr1 62908830 . G . PASS END=62908985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:36:0,81,1215:0,108,255:40,0 chr1 62908986 . C . PASS END=62908991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:35:0,63,945:0,105,255:25,0 chr1 62910409 . G . PASS END=62910411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,504:0,42,255:19,0 chr1 62910412 . A . PASS END=62910416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 62910417 . A . PASS END=62910419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,966:0,81,255:28,0 chr1 62910420 . C . PASS END=62910420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 62910421 . T . PASS END=62911094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:29:0,81,1215:0,83,255:40,0 chr1 62911095 . A . PASS END=62911095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1017:0,44,255:26,0 chr1 62911096 . C . PASS END=62911096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 62911097 . A . PASS END=62911100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:26,0 chr1 62913012 . G . PASS END=62913182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:97:36:0,97,1297:0,97,255:40,0 chr1 62914136 . T . PASS END=62914138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1221:0,102,255:34,0 chr1 62914139 . C . PASS END=62914139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 62914140 . T . PASS END=62914337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:95:37:0,95,1363:0,95,255:40,0 chr1 62915917 . G . PASS END=62915921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 62915922 . A . PASS END=62915922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 62915923 . T . PASS END=62915925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 62915926 . T . PASS END=62915928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 62915929 . T . PASS END=62915929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 62915930 . G . PASS END=62916625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:27:0,81,1024:0,81,255:40,0 chr1 62916626 . T . PASS END=62916626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:32,0 chr1 62916627 . A . PASS END=62916643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1184:0,83,255:33,0 chr1 62916644 . A . PASS END=62916652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:61:32:0,61,1035:0,61,255:25,0 chr1 62921085 . T . PASS END=62921127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,152,255:40,0 chr1 62923209 . C . PASS END=62923217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:26,0 chr1 62923218 . G . PASS END=62923218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 62923219 . T . PASS END=62923219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 62923220 . G . PASS END=62923376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:28:0,81,1215:0,84,255:40,0 chr1 62939648 . A . PASS END=62939648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 62939653 . C . PASS END=62939671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,102,1513:0,102,255:40,0 chr1 62939672 . A . PASS END=62939759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:42:0,80,1558:0,80,255:40,0 chr1 62940879 . C . PASS END=62940880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 62940881 . G . PASS END=62940885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 62940886 . A . PASS END=62940886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:28,0 chr1 62940887 . C . PASS END=62941022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:32:0,89,1249:0,89,255:40,0 chr1 62941378 . C . PASS END=62941614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:51:0,120,1760:0,120,255:40,0 chr1 62941720 . T . PASS END=62941720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 62941738 . C . PASS END=62941827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:75:0,120,1800:0,195,255:40,0 chr1 62943370 . C . PASS END=62943505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:48:0,87,1305:0,131,255:40,0 chr1 62947169 . T . PASS END=62947170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,209,255:40,0 chr1 62947171 . A . PASS END=62947195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,182,255:40,0 chr1 62951241 . T . PASS END=62951324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:103:0,120,1800:0,255,255:40,0 chr1 62953069 . C . PASS END=62953123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:87:0,120,1800:0,229,255:40,0 chr1 62954605 . C . PASS END=62954736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:41:0,108,1620:0,123,255:40,0 chr1 62954739 . A . PASS END=62954739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 62958375 . C . PASS END=62958506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:86:37:0,86,1350:0,86,255:40,0 chr1 62958507 . A . PASS END=62958507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:31,0 chr1 62958508 . G . PASS END=62958508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:37:0,93,1395:0,95,255:31,0 chr1 62958509 . A . PASS END=62958515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:36:0,66,990:0,92,255:22,0 chr1 62958516 . A . PASS END=62958516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1125:0,50,255:21,0 chr1 62958517 . T . PASS END=62958518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:34:0,69,1035:0,86,255:23,0 chr1 62959946 . C . PASS END=62959949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 62959950 . A . PASS END=62959950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 62959951 . A . PASS END=62959960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,919:0,78,255:26,0 chr1 62959961 . T . PASS END=62959972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 62959973 . A . PASS END=62959973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:29,0 chr1 62959974 . T . PASS END=62960063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1241:0,90,255:40,0 chr1 62960064 . T . PASS END=62960100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,113,1568:0,113,255:40,0 chr1 62960101 . A G, 49.62 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=2.446;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:9,10,0:15,11,0:48:84,0,50,735,842,1577:255,0,255:20,0:4.9623e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,17,8,13:14,10,9,12 chr1 62960102 . T . PASS END=62960119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:39:0,81,1215:0,100,255:40,0 chr1 62960120 . C . PASS END=62960129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:31:0,66,1080:0,66,255:26,0 chr1 62960130 . T . PASS END=62960130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,838:0,51,255:22,0 chr1 62960131 . T . PASS END=62960138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,992:0,68,255:24,0 chr1 62960146 . G . PASS END=62960146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 62961252 . C . PASS END=62961352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:90:39:0,90,1417:0,90,255:40,0 chr1 62962010 . C . PASS END=62962168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:90:42:0,90,1350:0,105,255:40,0 chr1 62970301 . A . PASS END=62970302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 62970303 . T . PASS END=62970303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 62970304 . C . PASS END=62970326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,623:0,41,255:19,0 chr1 62970327 . T . PASS END=62970328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 62970329 . A . PASS END=62970329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 62970330 . G . PASS END=62970333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:23,0 chr1 62970334 . G . PASS END=62970334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 62970335 . T . PASS END=62970388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,730:0,69,255:26,0 chr1 62970389 . C . PASS END=62970389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 62970390 . G . PASS END=62970393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 62970394 . A . PASS END=62970395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 62970396 . G . PASS END=62970400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 62970401 . A . PASS END=62970403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 62970404 . C . PASS END=62970405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 62970406 . T . PASS END=62970416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:18,0 chr1 62970417 . A . PASS END=62970445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:11,0 chr1 62970446 . T . PASS END=62970453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 62971353 . C . PASS END=62971364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr1 62971365 . G . PASS END=62971367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:28,0 chr1 62971368 . T . PASS END=62971368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr1 62971369 . C . PASS END=62971458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:31:0,85,1149:0,85,255:40,0 chr1 62971459 . C . PASS END=62971459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:29,0 chr1 62971460 . T . PASS END=62971469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 62971470 . T . PASS END=62971484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,64,255:26,0 chr1 62971485 . G . PASS END=62971485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 62971486 . G . PASS END=62971487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 62973633 . C . PASS END=62973729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,120,1800:0,123,255:40,0 chr1 62973736 . C . PASS END=62973736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,117,1755:0,138,255:39,0 chr1 62976248 . T . PASS END=62976344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,144,255:40,0 chr1 62979115 . C . PASS END=62979115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 62979116 . A . PASS END=62979277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:30:0,90,966:0,90,255:40,0 chr1 62979387 . T . PASS END=62979569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:44:0,102,1654:0,102,255:40,0 chr1 62993822 . C . PASS END=62993822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 62993823 . G . PASS END=62993825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,820:0,78,255:26,0 chr1 62993826 . G . PASS END=62993833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:29,0 chr1 62993834 . G . PASS END=62993834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr1 62993835 . A . PASS END=62993835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 62993836 . G . PASS END=62993837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 62993838 . A . PASS END=62993838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 62993839 . A . PASS END=62993855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:85:29:0,85,916:0,85,255:37,0 chr1 62993856 . A . PASS END=62993856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr1 62993857 . G . PASS END=62993962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:35:0,87,1305:0,103,255:40,0 chr1 62993963 . T . PASS END=62993976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:26:0,71,1053:0,71,255:26,0 chr1 62994943 . G . PASS END=62994944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 62994948 . C . PASS END=62994960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 62994961 . C . PASS END=62995117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,994:0,81,255:40,0 chr1 63001164 . C . PASS END=63001303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,131,255:40,0 chr1 63003562 . C . PASS END=63003730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,99,1382:0,111,255:40,0 chr1 63003731 . A . PASS END=63003732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 63005208 . T . PASS END=63005208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1443:0,114,255:38,0 chr1 63005211 . A . PASS END=63005211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 63005216 . C . PASS END=63005329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,106,1337:0,106,255:40,0 chr1 63005423 . C . PASS END=63005563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:86:34:0,86,1218:0,86,255:40,0 chr1 63008279 . C . PASS END=63008374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:97:37:0,97,1351:0,97,255:40,0 chr1 63008957 . T . PASS END=63008992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,156,255:40,0 chr1 63009327 . C . PASS END=63009416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:53:0,120,1800:0,145,255:40,0 chr1 63010618 . C . PASS END=63010711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,111,1665:0,123,255:40,0 chr1 63010713 . A . PASS END=63010713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,99,1485:0,144,255:33,0 chr1 63018403 . C . PASS END=63018543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:40:0,87,1305:0,110,255:40,0 chr1 63018544 . A . PASS END=63018544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:27,0 chr1 63018545 . T . PASS END=63018547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:40:0,84,1260:0,104,255:28,0 chr1 63018548 . A . PASS END=63018548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr1 63018549 . C . PASS END=63018552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 63018553 . T . PASS END=63018568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr1 63018569 . G . PASS END=63018572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,78,255:16,0 chr1 63021496 . C . PASS END=63021504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1173:0,88,255:34,0 chr1 63021505 . A . PASS END=63021505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1127:0,39,255:29,0 chr1 63021506 . T . PASS END=63021660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:36:0,87,1274:0,87,255:40,0 chr1 63024660 . C . PASS END=63024882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:36:0,91,1235:0,91,255:40,0 chr1 63024883 . A . PASS END=63024883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1156:0,75,255:31,0 chr1 63024884 . T . PASS END=63024884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 63024885 . A . PASS END=63024885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1096:0,44,255:29,0 chr1 63024886 . A . PASS END=63024886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1172:0,61,255:30,0 chr1 63024887 . G . PASS END=63024891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:31,0 chr1 63027288 . T . PASS END=63027366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,204,255:40,0 chr1 63027367 . A . PASS END=63027374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,198,255:40,0 chr1 63042933 . C . PASS END=63042933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 63042934 . T . PASS END=63042936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 63042937 . G . PASS END=63042937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 63042938 . G . PASS END=63043024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1260:0,87,255:39,0 chr1 63043025 . T . PASS END=63043034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,87,255:26,0 chr1 63044499 . T . PASS END=63044599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:63:0,118,1800:0,118,255:40,0 chr1 63044600 . G . PASS END=63044637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:93:53:0,93,1395:0,148,255:40,0 chr1 63044642 . A . PASS END=63044644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:60:48:0,60,900:0,144,255:21,0 chr1 63048855 . C . PASS END=63048925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:59:0,120,1800:0,168,255:40,0 chr1 63050451 . T . PASS END=63050549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:74:0,120,1800:0,207,255:40,0 chr1 63052178 . C . PASS END=63052295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,111,1592:0,111,255:40,0 chr1 63063238 . A . PASS END=63063732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:44:0,110,1692:0,110,255:40,0 chr1 63064367 . A . PASS END=63064477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,120,1800:0,189,255:40,0 chr1 63066753 . C . PASS END=63066867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:60:0,120,1800:0,151,255:40,0 chr1 63067440 . G . PASS END=63067553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:96:34:0,96,1440:0,102,255:40,0 chr1 63067956 . G . PASS END=63068051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:73:0,120,1800:0,187,255:40,0 chr1 63069640 . G . PASS END=63069894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:81:41:0,81,1215:0,99,255:40,0 chr1 63069895 . A . PASS END=63069895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:78:41:0,78,1170:0,107,255:26,0 chr1 63069896 . G . PASS END=63069907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:28,0 chr1 63070304 . G . PASS END=63070326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,200,255:40,0 chr1 63070327 . T C, 50.00 PASS DP=86;MQ=250.00;MQRankSum=7.840;ReadPosRankSum=4.807;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,49,0:0.576,0.000:85:12,14,0:24,35,0:47:85,0,48,1715,1248,2964:255,0,255:35,0:5.0000e+01,7.8435e-05,5.0943e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,16,25,24:14,22,26,23 chr1 63070328 . G . PASS END=63070364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,242,255:40,0 chr1 63070365 . A . PASS END=63070488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:87:37:0,87,1305:0,101,255:40,0 chr1 63084377 . C . PASS END=63084379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:29,0 chr1 63084380 . T . PASS END=63084380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 63084381 . A . PASS END=63084381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 63084382 . A . PASS END=63084382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 63084383 . G . PASS END=63084537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:30:0,84,1088:0,90,255:40,0 chr1 63084538 . A . PASS END=63084539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 63085571 . C . PASS END=63085664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:58:0,120,1800:0,154,255:40,0 chr1 63085670 . T . PASS END=63085670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 63090769 . T . PASS END=63090820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,103,1523:0,103,255:40,0 chr1 63090821 . T . PASS END=63090857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,140,255:40,0 chr1 63090858 . C T, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.415;ReadPosRankSum=1.237;FractionInformativeReads=0.966;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:13,14,0:15,14,0:48:85,0,50,964,991,1955:255,0,255:26,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,17,18,10:10,18,14,14 chr1 63090859 . A . PASS END=63090895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,115,1800:0,115,255:40,0 chr1 63090896 . A . PASS END=63090908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,149,255:40,0 chr1 63090915 . A . PASS END=63091060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:84:37:0,84,1260:0,104,255:40,0 chr1 63091061 . A . PASS END=63091070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,86,255:25,0 chr1 63091071 . T . PASS END=63091072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:29:0,57,855:0,87,255:19,0 chr1 63095235 . T . PASS END=63095253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,922:0,69,255:26,0 chr1 63095254 . C . PASS END=63095284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:30,0 chr1 63095285 . T . PASS END=63095287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 63095288 . G . PASS END=63095289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 63095290 . A . PASS END=63095295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 63095296 . G . PASS END=63095298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 63095299 . T . PASS END=63095301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 63095302 . C . PASS END=63095306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 63095307 . T . PASS END=63095309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 63095310 . A . PASS END=63095311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 63095312 . A . PASS END=63095330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:24,0 chr1 63095331 . G . PASS END=63095337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 63095338 . C . PASS END=63095338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 63095339 . A . PASS END=63095344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 63096911 . C . PASS END=63097076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:98:46:0,98,1800:0,98,255:40,0 chr1 63099169 . C . PASS END=63099249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,182,255:40,0 chr1 63099574 . T . PASS END=63099576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,137,255:40,0 chr1 63099577 . G A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=3.730;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:11,13,0:13,12,0:48:85,0,50,874,858,1732:255,0,255:23,0:5.0000e+01,6.5492e-05,5.2962e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,11,14:13,11,15,10 chr1 63099578 . G . PASS END=63099606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:49:0,92,1714:0,92,255:40,0 chr1 63100444 . C . PASS END=63100462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:42:0,85,1348:0,85,255:40,0 chr1 63100463 . T . PASS END=63100463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:38:44:0,38,1352:0,38,255:40,0 chr1 63100464 . C . PASS END=63100593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:40:0,96,1421:0,96,255:40,0 chr1 63100601 . A . PASS END=63100601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 63102202 . T . PASS END=63102202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,199,255:40,0 chr1 63102208 . C . PASS END=63102275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:71:0,120,1800:0,177,255:40,0 chr1 63113362 . T . PASS END=63113447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:61:0,120,1800:0,170,255:40,0 chr1 63113777 . C . PASS END=63113989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:36:0,90,1350:0,102,255:40,0 chr1 63114086 . T . PASS END=63114215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:49:0,120,1800:0,140,255:40,0 chr1 63119396 . T . PASS END=63119464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,198,255:40,0 chr1 63119650 . C . PASS END=63119650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 63119655 . C . PASS END=63119830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,87,255:40,0 chr1 63128696 . T . PASS END=63128793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,165,255:40,0 chr1 63128794 . C . PASS END=63128801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:61:0,120,1800:0,167,255:40,0 chr1 63128806 . A . PASS END=63128806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,114,1710:0,171,255:38,0 chr1 63153892 . A . PASS END=63153892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:4,0 chr1 63153898 . C . PASS END=63153898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 63153899 . T . LowGQ END=63153900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 63153901 . C . PASS END=63153903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 63153904 . A . LowGQ END=63153915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:4:0,0,78:0,0,104:3,0 chr1 63153916 . A . LowGQ END=63153936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,6,55:3,0 chr1 63269458 . A . PASS END=63269533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:66:0,120,1800:0,197,255:40,0 chr1 63270843 . G . PASS END=63270869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:93:0,120,1800:0,240,255:40,0 chr1 63270870 . T . PASS END=63270926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:75:0,120,1800:0,208,255:40,0 chr1 63282246 . A . PASS END=63282479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:89:30:0,89,1052:0,89,255:40,0 chr1 63284676 . C . PASS END=63285006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:90:33:0,90,1350:0,99,255:40,0 chr1 63286810 . A . PASS END=63286880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:72:0,120,1800:0,200,255:40,0 chr1 63294711 . T . PASS END=63294722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:35:0,94,1013:0,94,255:38,0 chr1 63294723 . A . PASS END=63294723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 63294724 . T . PASS END=63294843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:35:0,89,1294:0,89,255:40,0 chr1 63294844 . G . PASS END=63294844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:30,0 chr1 63294845 . A . PASS END=63294847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:31,0 chr1 63299709 . G . PASS END=63299787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:75:0,120,1800:0,204,255:40,0 chr1 63300447 . A . PASS END=63300523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:70:0,120,1800:0,160,255:40,0 chr1 63301057 . G . PASS END=63301068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,194,255:40,0 chr1 63307099 . A . PASS END=63307183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,100,1351:0,100,255:40,0 chr1 63307184 . A . PASS END=63307184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1435:0,79,255:34,0 chr1 63307185 . G . PASS END=63307218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1259:0,98,255:36,0 chr1 63327656 . A . PASS END=63327718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:70:0,120,1800:0,165,255:40,0 chr1 63329663 . A . PASS END=63329830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,102,1309:0,102,255:40,0 chr1 63788730 . A . PASS END=63788736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 63788737 . T . LowGQ END=63788737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 63788738 . C . PASS END=63788753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 63788754 . G . PASS END=63788762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 63788763 . A . PASS END=63788763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 63788764 . T . PASS END=63788777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr1 63788778 . G . PASS END=63788783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 63788784 . A . PASS END=63788784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 63788785 . C . PASS END=63788796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 63788797 . T . PASS END=63788892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,460:0,42,255:16,0 chr1 63788893 . T . PASS END=63788909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 63788910 . G . PASS END=63788910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 63788911 . T . PASS END=63788911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 63788912 . G . PASS END=63788917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 63788918 . G . PASS END=63788919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 63788920 . C . PASS END=63788921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 63788922 . G . PASS END=63788935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 63788936 . A . PASS END=63788938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 63788939 . G . PASS END=63788944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 63788945 . G . PASS END=63788945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 63788946 . C . PASS END=63788952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 63788953 . A . PASS END=63788956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 63788957 . G . PASS END=63788957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:6,0 chr1 63788958 . C . PASS END=63788975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr1 63788976 . A . PASS END=63788976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 63788977 . A . PASS END=63788981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 63788982 . G . PASS END=63788982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 63788983 . C . PASS END=63788988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 63788989 . G . PASS END=63788991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 63788992 . C . PASS END=63788998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,233:6,0 chr1 63788999 . C . PASS END=63789010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:4:0,6,90:0,12,155:3,0 chr1 63789011 . C . PASS END=63789031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,178:0,15,164:6,0 chr1 63789032 . G . PASS END=63789034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 63789035 . C . PASS END=63789037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 63789038 . C . PASS END=63789048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 63789049 . G . PASS END=63789072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 63789073 . C . PASS END=63789073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 63789074 . G . PASS END=63789094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:13,0 chr1 63789095 . G . PASS END=63789098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 63789099 . A . PASS END=63789099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 63789100 . G . PASS END=63789113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 63789114 . G . PASS END=63789140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:25,0 chr1 63789141 . A . PASS END=63789141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 63789142 . G . PASS END=63789151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 63789152 . G . PASS END=63789154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 63789155 . G . PASS END=63789157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 63789158 . T . PASS END=63789160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 63789161 . C . PASS END=63789167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 63789168 . A . PASS END=63789168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 63789169 . T . PASS END=63789188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:31,0 chr1 63789189 . A . PASS END=63789189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 63789190 . T . PASS END=63789241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1033:0,83,255:33,0 chr1 63789242 . C . PASS END=63789243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1037:0,60,255:29,0 chr1 63789244 . G . PASS END=63789251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 63789252 . T . PASS END=63789254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 63789255 . C . PASS END=63789338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1127:0,80,255:33,0 chr1 63789339 . C . PASS END=63789339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 63789340 . G . PASS END=63789343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 63789344 . G . PASS END=63789351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 63789352 . A . PASS END=63789352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:23,0 chr1 63789353 . C . PASS END=63789378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,902:0,64,255:25,0 chr1 63789379 . T . PASS END=63789379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 63789380 . G . PASS END=63789386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 63789387 . C . PASS END=63789398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:19,0 chr1 63789399 . A . PASS END=63789407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 63789408 . A . PASS END=63789410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 63789411 . G . PASS END=63789421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 63789422 . G . PASS END=63789438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 63789439 . T . PASS END=63789439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 63789440 . C . PASS END=63789447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 63789448 . A . PASS END=63789448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 63789449 . C . PASS END=63789450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 63789451 . A . PASS END=63789451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 63789452 . G . PASS END=63789453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 63789454 . A . PASS END=63789454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:11,0 chr1 63789455 . G . PASS END=63789456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 63789457 . A . PASS END=63789458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 63789459 . C . PASS END=63789460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 63789461 . C . PASS END=63789461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 63789462 . C . LowGQ END=63789462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:13,0,255:10,0 chr1 63789463 . T . PASS END=63789463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 63789464 . G . PASS END=63789464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 63789465 . C . LowGQ END=63789465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 63789466 . G . PASS END=63789466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 63789467 . C . PASS END=63789467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 63789468 . G . LowGQ END=63789468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,326:25,0,255:10,0 chr1 63789469 . A . PASS END=63789470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 63789471 . C . LowGQ END=63789472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,280:0,0,255:10,0 chr1 63789473 . G . PASS END=63789473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 63789474 . A . LowGQ END=63789475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,280:11,0,255:10,0 chr1 63789476 . G . PASS END=63789476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 63789477 . G . PASS END=63789477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 63789478 . C . PASS END=63789478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:9,0 chr1 63789479 . G . LowGQ END=63789480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,285:27,0,255:11,0 chr1 63789481 . T . PASS END=63789481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 63789482 . C . LowGQ END=63789483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,263:52,0,255:9,0 chr1 63789484 . T . PASS END=63789484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 63789485 . G . LowGQ END=63789486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,285:44,0,255:9,0 chr1 63789487 . T . PASS END=63789487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 63789488 . G . PASS END=63789488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 63789489 . C . LowGQ END=63789492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,198:0,0,228:10,0 chr1 63789493 . G . PASS END=63789493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 63789494 . C . LowGQ END=63789497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,230:3,0,255:11,0 chr1 63789498 . G . PASS END=63789498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 63789499 . G . PASS END=63789499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:8,0 chr1 63789500 . C . LowGQ END=63789500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,277:14,0,255:6,0 chr1 63789501 . G . PASS END=63789501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 63789502 . C . LowGQ END=63789502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:12:0,0,244:30,0,255:5,0 chr1 63789503 . T . PASS END=63789503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:8,0 chr1 63789504 . T . PASS END=63789504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 63789505 . A . LowGQ END=63789507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:11:0,0,183:0,0,239:6,0 chr1 63789508 . G . PASS END=63789508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 63789509 . C . LowGQ END=63789511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,4:10:0:9:0,0,47:70,0,167:3,0 chr1 63789512 . G . PASS END=63789513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 63789514 . C . LowGQ END=63789514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,3:9:0:9:0,0,116:59,0,175:4,0 chr1 63789515 . G . PASS END=63789516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 63789517 . C . LowGQ END=63789517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,147:9,0,156:5,0 chr1 63789518 . G . PASS END=63789518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 63789519 . G . LowGQ END=63789522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,114:0,0,140:7,0 chr1 63789523 . C . PASS END=63789523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 63789524 . C . LowGQ END=63789526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,45:9,0,109:6,0 chr1 63789527 . C . PASS END=63789527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 63789528 . G . LowGQ END=63789528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,5:8:0:8:0,0,5:87,0,93:3,0 chr1 63789529 . C . PASS END=63789530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 63789531 . G . LowGQ END=63789531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,63:62,0,125:4,0 chr1 63789532 . C . PASS END=63789532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 63789533 . G . PASS END=63789533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 63789534 . G . PASS END=63789536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 63789537 . C . PASS END=63789544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 63789545 . C . PASS END=63789545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 63789546 . C . PASS END=63789548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 63789549 . C . PASS END=63789551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 63789552 . T . PASS END=63789555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:5,0 chr1 63789556 . G . PASS END=63789582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr1 63789583 . C . PASS END=63789589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,70:1,0 chr1 63789590 . G . LowDepth END=63789626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr1 63789627 . G A, 5.47 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4666e+00,4.4677e+00,4.4580e+00,4.0237e+01,3.9238e+01,4.3237e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,0,1 chr1 63789628 . C . LowGQ END=63789664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,22:0,0,33:2,0 chr1 63789665 . G . LowDepth;LowGQ END=63789751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 63789752 . G . PASS END=63789756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 63789757 . T . LowGQ END=63789757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 63789758 . G . PASS END=63789777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 63789778 . C . PASS END=63789778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 63789779 . C . PASS END=63789791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 63789792 . G . PASS END=63789811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:8,0 chr1 63789812 . G . PASS END=63789819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 63789820 . C . PASS END=63789820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 63789821 . C . PASS END=63789884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,344:0,33,255:12,0 chr1 63789885 . G . PASS END=63789897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 63789898 . C . PASS END=63789898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 63789899 . T . PASS END=63789899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 63789900 . C . PASS END=63789900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 63789901 . C . PASS END=63789927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 63789928 . T . PASS END=63789943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 63789944 . G . PASS END=63789985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 63789986 . A . PASS END=63789995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 63789996 . G . PASS END=63789996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 63789997 . T . PASS END=63790026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:24,0 chr1 63790027 . A . PASS END=63790027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 63790028 . A . PASS END=63790049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 63790050 . A . PASS END=63790050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,746:0,30,255:22,0 chr1 63790051 . C . PASS END=63790055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 63790056 . A . PASS END=63790056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 63790057 . C . PASS END=63790064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 63790065 . C . PASS END=63790065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 63790066 . C . PASS END=63790068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 63790069 . T . PASS END=63790070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,835:0,42,255:22,0 chr1 63790071 . C . PASS END=63790074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 63790075 . G . PASS END=63790075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 63790076 . C . PASS END=63790076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 63790077 . G . PASS END=63790077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr1 63790078 . T . PASS END=63790083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 63790084 . T . PASS END=63790103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,49,255:19,0 chr1 63790104 . C . PASS END=63790104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 63790105 . C . PASS END=63790106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 63790107 . G . PASS END=63790115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 63790116 . G . PASS END=63790116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:11,0 chr1 63790117 . C . PASS END=63790124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,32,255:13,0 chr1 63790125 . G . PASS END=63790132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,405:0,22,255:10,0 chr1 63790133 . G . PASS END=63790150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:11,0 chr1 63790151 . A . PASS END=63790151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 63790152 . T . PASS END=63790155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 63790156 . C . PASS END=63790163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 63790164 . T . PASS END=63790166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:17:11:0,17,270:0,17,255:6,0 chr1 63833345 . C . PASS END=63833345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 63833368 . T . PASS END=63833368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 63836430 . T . PASS END=63836430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 63836508 . A . PASS END=63836508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 63836521 . C . PASS END=63836521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 63836529 . C . PASS END=63836529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,145,255:40,0 chr1 63836649 . A . PASS END=63836749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,1:105:99:78:0,120,1800:0,199,255:40,0 chr1 63836750 . T . LowGQ END=63836751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,9:103:0:100:0,0,3056:17,0,255:40,11 chr1 63836752 . A . PASS END=63836756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,3:100:99:98:0,120,1800:0,215,255:40,0 chr1 63836757 . A . PASS END=63836780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:97:0,120,1800:0,214,255:40,1 chr1 63862184 . G . PASS END=63862268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,131,255:40,0 chr1 63862273 . G . PASS END=63862273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr1 63862275 . T . PASS END=63862275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,123,255:40,0 chr1 63867925 . G . PASS END=63868016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:44:0,120,1800:0,122,255:40,0 chr1 63868019 . G . PASS END=63868019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1573:0,99,255:39,0 chr1 63870124 . G . PASS END=63870212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:35:0,96,1440:0,100,255:40,0 chr1 63871988 . T . PASS END=63872071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:74:0,120,1800:0,212,255:40,0 chr1 63872724 . T . PASS END=63872724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 63872731 . A . PASS END=63872731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 63872733 . A . PASS END=63872797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,158,255:40,0 chr1 63876811 . G . PASS END=63877002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:39:0,87,1305:0,105,255:40,0 chr1 63877004 . T . PASS END=63877004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 63877353 . G . PASS END=63877365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,133,255:40,0 chr1 63877597 . G . PASS END=63877732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:41:0,93,1408:0,93,255:40,0 chr1 63879732 . G . PASS END=63879818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:65:0,120,1800:0,167,255:40,0 chr1 63881489 . C . PASS END=63881492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,213,255:40,0 chr1 63881544 . C . PASS END=63881551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:105:0,120,1800:0,255,255:40,0 chr1 63881552 . C T, 358.17 PASS DP=104;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,104,0:1.000,0.000:104:0,52,0:0,52,0:308:396,311,0,3899,311,3899:255,255,0:0,0:3.5817e+02,3.0817e+02,0.0000e+00,4.4853e+02,3.4294e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,55,49:0,0,61,43 chr1 63881553 . T . PASS END=63881589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:105:0,120,1800:0,255,255:40,0 chr1 63881590 . A . PASS END=63881628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:83:0,120,1800:0,234,255:40,0 chr1 63885041 . G . PASS END=63885111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:73:0,120,1800:0,215,255:40,0 chr1 63894404 . A . PASS END=63894473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:86:0,120,1800:0,242,255:40,0 chr1 63894480 . A . PASS END=63894480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:90:0,120,1800:0,255,255:40,0 chr1 63894597 . A . PASS END=63894797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:40:0,103,1290:0,103,255:40,0 chr1 63902494 . T . PASS END=63902494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 63902495 . T . PASS END=63902495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:29,0 chr1 63902496 . T . PASS END=63902497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 63902498 . T . PASS END=63902498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:28,0 chr1 63902499 . T . PASS END=63902499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 63902500 . A . PASS END=63902500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 63902501 . T . PASS END=63902502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 63902503 . T . PASS END=63902504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 63902505 . A . PASS END=63902691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:31:0,90,1350:0,90,255:40,0 chr1 63902738 . A . PASS END=63902738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 63902780 . G . PASS END=63902780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 63902843 . T . PASS END=63902843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 63902865 . A . PASS END=63902865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 63903095 . T . PASS END=63903095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 63903127 . T . PASS END=63903127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 63903145 . C . PASS END=63903145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,183,255:40,0 chr1 63903361 . G . PASS END=63903361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 63903394 . T . PASS END=63903394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:70:0,120,1800:0,177,255:40,0 chr1 63903485 . T . PASS END=63903485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:96:55:0,96,1931:0,96,255:40,2 chr1 63903695 . C . PASS END=63903695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,163,255:40,0 chr1 63903828 . G . PASS END=63903828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:29:0,45,675:0,70,255:14,0 chr1 63903860 . G . PASS END=63903860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 63903929 . A . PASS END=63903929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1243:0,102,255:34,0 chr1 63904004 . T . PASS END=63904004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 63904076 . T . PASS END=63904076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,157,255:40,0 chr1 63904155 . A . PASS END=63904155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 63906713 . T . PASS END=63906774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,197,255:40,0 chr1 63912478 . T . PASS END=63912508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:87:0,120,1800:0,207,255:40,0 chr1 63912509 . C . PASS END=63912527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:87:0,120,1800:0,228,255:40,0 chr1 63913257 . T . PASS END=63913285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,131,255:40,0 chr1 63915449 . C . PASS END=63915486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:88:0,120,1800:0,231,255:40,0 chr1 63917659 . T . PASS END=63917735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,161,255:40,0 chr1 63919589 . C . PASS END=63919645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:82:0,120,1800:0,188,255:40,0 chr1 63920051 . T . PASS END=63920144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:57:0,120,1800:0,158,255:40,0 chr1 63920561 . C . PASS END=63920639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:95:0,120,1800:0,255,255:40,0 chr1 63944435 . T . PASS END=63944504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,181,255:40,0 chr1 63952425 . T . PASS END=63952437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,204,255:40,0 chr1 63952438 . C T, 49.96 PASS DP=69;MQ=248.66;MQRankSum=6.751;ReadPosRankSum=4.051;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,34,0:0.493,0.000:69:18,24,0:17,10,0:48:85,0,50,1128,1251,2379:255,0,255:33,0:4.9961e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,19,18,16:17,18,14,20 chr1 63952439 . A . PASS END=63952444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 63955754 . C . PASS END=63955889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,120,1800:0,127,255:40,0 chr1 63974199 . A . PASS END=63974241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:83:0,120,1800:0,196,255:40,0 chr1 63988781 . C . PASS END=63988781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 63988782 . T . PASS END=63988782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1305:0,68,255:38,0 chr1 63988783 . G . PASS END=63989087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1127:0,81,255:40,0 chr1 63989088 . A . PASS END=63989089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 63989090 . G . PASS END=63989098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 63989099 . A . PASS END=63989099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 63989100 . G . PASS END=63989100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 63989101 . C . PASS END=63989103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 63989104 . T . PASS END=63989104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,879:0,57,255:20,0 chr1 63989105 . C . PASS END=63989114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:22,0 chr1 63989115 . T . PASS END=63989116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:20,0 chr1 63989117 . C . PASS END=63989121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 63989122 . C . PASS END=63989128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 63989129 . T . PASS END=63989129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 63989130 . C . PASS END=63989167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr1 63989168 . C . PASS END=63989168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 63989169 . A . PASS END=63989170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 63989203 . A . PASS END=63989217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 63989218 . A . PASS END=63989226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 63989227 . T . PASS END=63989232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:5,0 chr1 63989233 . C . PASS END=63989233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:9:9:0,9,135:0,27,255:3,0 chr1 63989234 . A G, 0.02 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:2,1,0:6,0,0:23:12,0,50,36,286,322:12,0,255:3,0:2.1288e-02,2.3108e+01,7.6108e+01,5.8869e+01,3.4399e+02,3.4798e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,6,0,1:4,4,0,1 chr1 63989235 . G . PASS END=63989240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:7:0,12,180:0,21,255:5,0 chr1 63991243 . A . PASS END=63991430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:45:0,104,1635:0,104,255:40,0 chr1 63997491 . C . PASS END=63997595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:89:35:0,89,1255:0,89,255:40,0 chr1 63997596 . A . PASS END=63997632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,210,255:40,0 chr1 63997633 . A T, 48.67 PASS DP=80;MQ=249.95;MQRankSum=7.633;ReadPosRankSum=4.617;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,35,0:0.438,0.000:80:26,17,0:19,18,0:47:83,0,50,1207,1541,2748:255,0,255:40,0:4.8670e+01,8.0765e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,25,19,16:21,24,19,16 chr1 63997634 . T . PASS END=63997670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,164,255:40,2 chr1 63997671 . T . PASS END=63997702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,108,1620:0,124,255:40,0 chr1 63998341 . A . PASS END=63998369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,152,255:40,0 chr1 63998370 . A . PASS END=63998427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:84:0,120,1800:0,223,255:40,0 chr1 63999125 . T . PASS END=63999277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:34:0,84,1260:0,86,255:40,0 chr1 63999278 . A . PASS END=63999286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,86,255:26,0 chr1 63999287 . A . PASS END=63999289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 63999290 . A . PASS END=63999290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 63999291 . A . PASS END=63999295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 63999296 . G . PASS END=63999297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 63999298 . T . PASS END=63999298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 63999299 . C . PASS END=63999310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:24,0 chr1 63999311 . T . PASS END=63999311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:22,0 chr1 63999312 . T . PASS END=63999315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:23,0 chr1 63999316 . T . PASS END=63999316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:22,0 chr1 63999317 . A . PASS END=63999320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 63999766 . G . PASS END=63999788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:46:0,89,1563:0,89,255:40,0 chr1 63999789 . T . PASS END=63999825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,151,255:40,0 chr1 63999826 . C T, 50.00 PASS DP=59;MQ=249.93;MQRankSum=6.155;ReadPosRankSum=2.725;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,31,0:0.525,0.000:59:14,16,0:14,15,0:48:85,0,50,1092,972,2064:255,0,255:21,0:5.0000e+01,6.6527e-05,5.2748e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,18,12,19:12,16,17,14 chr1 63999827 . A . PASS END=63999867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,99,1469:0,99,255:40,0 chr1 63999868 . T C, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.635;ReadPosRankSum=1.649;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,30,0:0.638,0.000:47:7,16,0:10,14,0:44:85,0,42,185,185,185:255,0,255:12,0:5.0000e+01,1.8043e-04,4.5010e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,11,6,24:6,11,18,12 chr1 63999869 . G . PASS END=63999887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:39:0,80,1430:0,80,255:40,0 chr1 64011587 . G . PASS END=64011728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:37:0,96,1440:0,101,255:40,0 chr1 64017396 . G . PASS END=64017505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:50:0,120,1800:0,146,255:40,0 chr1 64018487 . G . PASS END=64018612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:58:0,120,1800:0,174,255:40,0 chr1 64021029 . G . PASS END=64021058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,117,1581:0,119,255:40,0 chr1 64021059 . G . PASS END=64021095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,166,255:40,0 chr1 64021096 . G A, 47.32 PASS DP=68;MQ=250.00;MQRankSum=6.972;ReadPosRankSum=3.632;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,28,0:0.412,0.000:68:26,16,0:14,12,0:46:82,0,50,1001,1431,2432:255,0,255:38,0:4.7320e+01,1.0225e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,20,13,15:24,16,13,15 chr1 64021097 . G . PASS END=64021133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,179,255:40,0 chr1 64021134 . C . PASS END=64021186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,99,1422:0,109,255:40,0 chr1 64022785 . G . PASS END=64022918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:97:49:0,97,1538:0,97,255:40,0 chr1 64027380 . A . PASS END=64027462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:51:0,120,1800:0,146,255:40,0 chr1 64027463 . G . PASS END=64027463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,11:92:27:92:0,27,2599:0,27,255:40,0 chr1 64027464 . A . PASS END=64027528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:82:42:0,82,1236:0,82,255:40,0 chr1 64033981 . G . PASS END=64034157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1260:0,81,255:40,0 chr1 64034158 . G . PASS END=64034166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,87,255:23,0 chr1 64034167 . A . PASS END=64034190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 64036692 . T . PASS END=64036799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,105,1575:0,141,255:40,0 chr1 64038113 . G . PASS END=64038144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:72:0,120,1800:0,183,255:40,0 chr1 64038145 . A . PASS END=64038187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,125,255:40,0 chr1 64048982 . C . PASS END=64048987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:126,2:128:99:128:0,120,1800:0,255,255:40,0 chr1 64059121 . C . PASS END=64059121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 64059160 . A . PASS END=64059168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 64059169 . A . PASS END=64059169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:27,0 chr1 64059170 . T . PASS END=64059174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 64059175 . A . PASS END=64059183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1014:0,68,255:26,0 chr1 64059184 . A . PASS END=64059246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1141:0,83,255:33,0 chr1 64059247 . C . PASS END=64059247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr1 64059248 . A . PASS END=64059273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 64059274 . T . PASS END=64059283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 64059284 . G . PASS END=64059285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 64059286 . A . PASS END=64059294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 64059295 . A . PASS END=64059295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:23,0 chr1 64059296 . C . PASS END=64059298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 64059299 . T . PASS END=64059299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 64059300 . G . PASS END=64059304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,890:0,72,255:25,0 chr1 64059305 . C . PASS END=64059306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 64059307 . G . PASS END=64059315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 64059316 . C . PASS END=64059316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 64059317 . A . PASS END=64059324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 64059325 . A . PASS END=64059325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:19,0 chr1 64059326 . C . PASS END=64059336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:21,0 chr1 64059337 . G . PASS END=64059337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 64059338 . G . PASS END=64059340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 64059341 . G . PASS END=64059341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 64059342 . G . PASS END=64059345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 64059346 . G . PASS END=64059346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 64059347 . G . PASS END=64059348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 64059349 . C . PASS END=64059349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:17,0 chr1 64059350 . G . PASS END=64059350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:17,0 chr1 64059351 . G . PASS END=64059358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:19,0 chr1 64059359 . T . PASS END=64059361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,53,255:13,0 chr1 64059362 . A . PASS END=64059362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:11,0 chr1 64059363 . G . PASS END=64059392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:31:12:0,31,449:0,31,255:13,0 chr1 64059393 . T . PASS END=64059393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 64059394 . G . PASS END=64059399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 64059400 . A . PASS END=64059400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:10,0 chr1 64059401 . A . PASS END=64059401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 64059402 . C . PASS END=64059405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:20:12:0,20,405:0,20,255:9,0 chr1 64089132 . A . PASS END=64089426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:38:0,87,1366:0,87,255:40,0 chr1 64089427 . A . PASS END=64089427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:32,0 chr1 64089428 . T . PASS END=64089431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:31,0 chr1 64095091 . C . PASS END=64095091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 64095096 . A . PASS END=64095242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:33:0,87,1164:0,87,255:40,0 chr1 64095243 . A . PASS END=64095243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:31,0 chr1 64095244 . A . PASS END=64095248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1247:0,89,255:32,0 chr1 64095249 . T . PASS END=64095249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1041:0,66,255:28,0 chr1 64095250 . C . PASS END=64095250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 64095251 . T . PASS END=64095251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr1 64095252 . A . PASS END=64095256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1241:0,86,255:30,0 chr1 64095257 . A . PASS END=64095257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:27,0 chr1 64095258 . G . PASS END=64095258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 64095613 . G . PASS END=64095759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,132,255:40,0 chr1 64097328 . T . PASS END=64097328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 64097329 . G . PASS END=64097339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 64097340 . A . PASS END=64097340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 64097341 . T . PASS END=64097341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 64097342 . T . PASS END=64097342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 64097343 . C . PASS END=64097394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:31:0,82,1030:0,82,255:40,0 chr1 64097395 . G . PASS END=64097431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:38:0,93,1395:0,113,255:40,0 chr1 64097432 . C T, 48.06 PASS DP=38;MQ=250.00;MQRankSum=5.189;ReadPosRankSum=1.700;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,16,0:0.421,0.000:38:8,9,0:14,7,0:47:83,0,50,572,750,1322:255,0,255:19,0:4.8056e+01,8.9825e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,3,13:14,8,10,6 chr1 64097433 . G . PASS END=64097441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:30,0 chr1 64097442 . C . PASS END=64097448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:24,0 chr1 64097449 . T . PASS END=64097453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:25:0,51,765:0,75,255:17,0 chr1 64100500 . T . PASS END=64100515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1271:0,89,255:37,0 chr1 64100516 . A . PASS END=64100650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:32:0,81,1215:0,84,255:40,0 chr1 64100651 . A . PASS END=64100651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 64100652 . G . PASS END=64100652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 64100653 . G . PASS END=64100674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,900:0,67,255:24,0 chr1 64100675 . C . PASS END=64100675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 64100676 . T . PASS END=64100683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 64100684 . A . PASS END=64100689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 64100690 . G . PASS END=64100690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 64100696 . T . PASS END=64100696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 64101905 . G . PASS END=64101913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:62:21:0,62,784:0,62,255:26,0 chr1 64101914 . A . PASS END=64101918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr1 64101919 . T . PASS END=64101919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 64101920 . C . PASS END=64101926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 64101927 . A . PASS END=64101927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 64101928 . G . PASS END=64102046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:32:0,83,1224:0,83,255:40,0 chr1 64102047 . G . PASS END=64102047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 64102048 . T . PASS END=64102051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 64102052 . C . PASS END=64102059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,64,255:24,0 chr1 64102070 . C . PASS END=64102070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 64104348 . C . PASS END=64104348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 64104356 . G . PASS END=64104471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,120,1800:0,126,255:40,0 chr1 64104481 . A . PASS END=64104481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 64114187 . G . PASS END=64114200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr1 64114201 . C . PASS END=64114201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 64114202 . C . PASS END=64114202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 64114203 . G . PASS END=64114285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:28:0,80,997:0,80,255:40,0 chr1 64114286 . G . PASS END=64114286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 64114287 . A . PASS END=64114287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 64114288 . T . PASS END=64114288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1001:0,52,255:31,0 chr1 64114289 . C . PASS END=64114318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:32:0,85,1158:0,85,255:34,0 chr1 64114319 . A . PASS END=64114323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 64117340 . G . PASS END=64117340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 64117341 . T . PASS END=64117341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 64117342 . A . PASS END=64117345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr1 64117346 . T . PASS END=64117347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 64117348 . A . PASS END=64117357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1125:0,90,255:37,0 chr1 64117358 . G . PASS END=64117394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1188:0,94,255:40,0 chr1 64117395 . G . PASS END=64117395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:22:46:0,22,1239:0,22,255:39,0 chr1 64117396 . A . PASS END=64117432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:45:0,96,1582:0,96,255:40,0 chr1 64117433 . G . PASS END=64117523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:37:0,99,1390:0,101,255:40,0 chr1 64120003 . G . PASS END=64120008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 64120009 . C . PASS END=64120009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 64120010 . G . PASS END=64120010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 64120011 . C . PASS END=64120016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 64120017 . T . PASS END=64120017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 64120018 . T . PASS END=64120132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,997:0,80,255:39,0 chr1 64120133 . C . PASS END=64120137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:24,0 chr1 64125254 . C . PASS END=64125254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 64125257 . G . PASS END=64125346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:54:0,106,1800:0,106,255:40,1 chr1 64125418 . A . PASS END=64125418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:97:0,120,1800:0,255,255:40,0 chr1 64125439 . A . PASS END=64125439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:96:0,120,1800:0,255,255:40,0 chr1 64125577 . C . PASS END=64125577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 64125582 . T . PASS END=64125582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 64125694 . G . PASS END=64125694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1473:0,104,255:34,0 chr1 64125703 . A . PASS END=64125703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 64125734 . T . PASS END=64125734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 64125830 . G . PASS END=64125830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1710:0,144,255:38,0 chr1 64240089 . A . LowGQ END=64240179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,33:2,0 chr1 64474977 . A . PASS END=64475048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:39:0,86,1377:0,86,255:40,0 chr1 64492867 . A . PASS END=64492969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:70:0,120,1800:0,140,255:40,0 chr1 64515363 . A . PASS END=64515374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:24,0 chr1 64515375 . C . PASS END=64515375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 64515376 . C . PASS END=64515376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr1 64515377 . C . PASS END=64515378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 64515379 . C T, 122.24 PASS DP=26;MQ=250.00;FractionInformativeReads=0.962 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,16,0:0,9,0:72:160,75,0,969,75,969:255,81,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,8:0,0,14,11 chr1 64515380 . G . PASS END=64515383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 64515384 . A . PASS END=64515385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 64515386 . C . PASS END=64515389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 64515390 . T . PASS END=64515390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 64515391 . G . PASS END=64515416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:34,0 chr1 64515417 . A . PASS END=64515420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr1 64515421 . A . PASS END=64515421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 64515422 . G . PASS END=64515502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1260:0,81,255:40,0 chr1 64515503 . C . PASS END=64515503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1031:0,46,255:27,0 chr1 64515504 . C . PASS END=64515506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 64515507 . G . PASS END=64515507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 64515508 . G . PASS END=64515513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,996:0,84,255:28,0 chr1 64515514 . C . PASS END=64515516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1054:0,74,255:26,0 chr1 64515517 . C . PASS END=64515524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 64515525 . C . PASS END=64515529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,992:0,68,255:27,0 chr1 64515530 . A . PASS END=64515546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1213:0,89,255:36,0 chr1 64515547 . G . PASS END=64515547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:33,0 chr1 64515548 . C . PASS END=64515637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1100:0,86,255:38,0 chr1 64515638 . T . PASS END=64515638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1056:0,69,255:28,0 chr1 64515639 . T . PASS END=64515650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:32,0 chr1 64516358 . G . PASS END=64516388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:103:0,120,1800:0,255,255:40,0 chr1 64603052 . A . PASS END=64603059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:22,0 chr1 64603060 . A . PASS END=64603060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 64603061 . T . PASS END=64603074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,795:0,66,255:24,0 chr1 64603075 . T . PASS END=64603075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 64603076 . C . PASS END=64603091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,840:0,72,255:26,0 chr1 64603092 . G . PASS END=64603125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr1 64603126 . C . PASS END=64603143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 64603144 . T . PASS END=64603171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:17,0 chr1 64603172 . G . PASS END=64603172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 64603173 . A . PASS END=64603174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 64603175 . C . PASS END=64603179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 64605792 . C . PASS END=64605799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 64605800 . A . PASS END=64605800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 64605801 . C . PASS END=64605826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,864:0,69,255:26,0 chr1 64605827 . T . PASS END=64605839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 64605840 . C . PASS END=64605840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 64605841 . T . PASS END=64605841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 64605842 . C . PASS END=64605842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 64605843 . A . PASS END=64605849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 64605850 . C . PASS END=64605851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,988:0,63,255:27,0 chr1 64605852 . T . PASS END=64605922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:33:0,86,1209:0,86,255:40,0 chr1 64605923 . T . PASS END=64605923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1402:0,79,255:40,0 chr1 64605924 . G . PASS END=64605997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1242:0,81,255:40,0 chr1 64605998 . A . PASS END=64605998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1278:0,67,255:35,0 chr1 64605999 . T . PASS END=64606038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:36:0,80,1319:0,80,255:39,0 chr1 64606039 . C . PASS END=64606039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr1 64606040 . C . PASS END=64606047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,91,255:33,0 chr1 64606048 . G . PASS END=64606061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:27:0,69,1035:0,81,255:26,0 chr1 64606062 . C . PASS END=64606062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:23,0 chr1 64606063 . G . PASS END=64606079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,893:0,62,255:24,0 chr1 64606080 . G . PASS END=64606080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 64606081 . A . PASS END=64606081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 64606082 . A . PASS END=64606082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 64606083 . T . PASS END=64606085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 64606086 . C . PASS END=64606109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,720:0,44,255:19,0 chr1 64608088 . A . PASS END=64608095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,566:0,45,255:19,0 chr1 64608096 . T . PASS END=64608096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 64608097 . G . PASS END=64608097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:20,0 chr1 64608098 . T . PASS END=64608110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:24,0 chr1 64608111 . G . PASS END=64608210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:30:0,90,1119:0,90,255:40,0 chr1 64608211 . G . PASS END=64608211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 64608212 . T . PASS END=64608239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,95,255:37,0 chr1 64608240 . T . PASS END=64608240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:26,0 chr1 64608241 . A . PASS END=64608242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 64608243 . T . PASS END=64608243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:27,0 chr1 64608244 . G . PASS END=64608247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 64608248 . C . PASS END=64608260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,71,255:26,0 chr1 64608261 . C . PASS END=64608261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 64608262 . A . PASS END=64608262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 64608263 . A . PASS END=64608263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:20,0 chr1 64608264 . A . PASS END=64608264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 64608265 . A . PASS END=64608265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 64608266 . G . PASS END=64608266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 64608267 . G . PASS END=64608267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 64608268 . A . PASS END=64608271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:24:0,41,765:0,41,255:21,0 chr1 64608272 . T . PASS END=64608275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 64608276 . T . PASS END=64608291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,713:0,47,255:19,0 chr1 64608292 . A . PASS END=64608299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:16,0 chr1 64608300 . T . PASS END=64608300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 64608301 . T . PASS END=64608317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr1 64608318 . G . PASS END=64608326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 64608327 . G . PASS END=64608327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 64608328 . C . PASS END=64608328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 64608329 . G T, 86.13 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,8,0:0,5,0:36:124,39,0,504,39,504:255,39,0:0,0:8.6127e+01,3.6127e+01,1.0596e-03,4.5000e+02,7.0897e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,10:0,0,4,9 chr1 64608330 . T . PASS END=64608330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 64608331 . G . PASS END=64608331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 64608332 . C . PASS END=64608332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 64608333 . G . PASS END=64608341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 64624664 . A . PASS END=64624678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:21,0 chr1 64624679 . A . PASS END=64624679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:20,0 chr1 64624680 . G . PASS END=64624684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 64624685 . A . PASS END=64624685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 64624686 . G . PASS END=64624691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 64624692 . A . PASS END=64624692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:21,0 chr1 64624693 . A . PASS END=64624705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,845:0,65,255:25,0 chr1 64624706 . A . PASS END=64624708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 64624709 . T . PASS END=64624709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 64624710 . A . PASS END=64624711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 64624712 . T . PASS END=64624712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:28,0 chr1 64624713 . A . PASS END=64624745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1102:0,83,255:31,0 chr1 64624746 . T . PASS END=64624746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 64624747 . T . PASS END=64624749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 64624750 . C . PASS END=64624750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 64624751 . T . PASS END=64624751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 64624752 . C . PASS END=64624752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 64624753 . T . PASS END=64624753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 64624754 . T . PASS END=64624754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 64624755 . C . PASS END=64624761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1081:0,93,255:31,0 chr1 64624762 . A . PASS END=64624763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1008:0,76,255:29,0 chr1 64624764 . T . PASS END=64624767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 64624768 . G . PASS END=64624771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1049:0,60,255:29,0 chr1 64624772 . G . PASS END=64624775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 64624776 . G . PASS END=64624776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr1 64624777 . A . PASS END=64624777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:29,0 chr1 64624778 . A . PASS END=64624778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 64624779 . T . PASS END=64624779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 64624780 . A . PASS END=64624780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 64624781 . A . PASS END=64624781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 64624782 . C . PASS END=64624782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 64624783 . C . PASS END=64624786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 64624787 . A . PASS END=64624787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 64624788 . G . PASS END=64624792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 64624793 . C . PASS END=64624798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1024:0,71,255:26,0 chr1 64624799 . C . PASS END=64624799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:23,0 chr1 64624800 . A . PASS END=64624804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:24,0 chr1 64624805 . T . PASS END=64624817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 64624818 . A . PASS END=64624818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 64624819 . A . PASS END=64624829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 64624830 . A . PASS END=64624830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 64624831 . G . PASS END=64624832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 64624833 . T . PASS END=64624841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 64624842 . A G, 40.36 PASS DP=19;MQ=250.00;MQRankSum=3.194;ReadPosRankSum=1.898;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,5,0:0.263,0.000:19:9,2,0:5,3,0:40:75,0,50,179,493,671:128,0,255:13,0:4.0365e+01,4.2119e-04,5.3000e+01,1.7885e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,2,3:6,8,1,4 chr1 64624843 . G . PASS END=64624843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 64624844 . A . PASS END=64624844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:17,0 chr1 64624845 . G . PASS END=64624866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:18,0 chr1 64624867 . A . PASS END=64624875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,34,255:12,0 chr1 64643111 . A . PASS END=64643681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:34:0,85,1209:0,85,255:40,0 chr1 64643682 . T . PASS END=64643682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,0 chr1 64643683 . G . PASS END=64643685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,101,1457:0,101,255:35,0 chr1 64643686 . G . PASS END=64643686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr1 64643687 . C . PASS END=64643840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:36:0,88,1310:0,88,255:40,0 chr1 64643841 . G . PASS END=64643841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1319:0,73,255:36,0 chr1 64643842 . A . PASS END=64643934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1140:0,81,255:40,0 chr1 64643935 . A . PASS END=64643935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 64643936 . A . PASS END=64644189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1125:0,81,255:40,0 chr1 64644190 . C . PASS END=64644190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1549:0,77,255:34,0 chr1 64644191 . C . PASS END=64644208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:37:0,85,1371:0,85,255:38,0 chr1 64644209 . G . PASS END=64644210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:33,0 chr1 64644211 . A . PASS END=64644211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,99,1485:0,101,255:33,0 chr1 64644212 . G . PASS END=64644212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:33,0 chr1 64644213 . C . PASS END=64644221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1411:0,82,255:34,0 chr1 64644222 . C . PASS END=64644222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:33,0 chr1 64644223 . T . PASS END=64644236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:35:0,81,1294:0,81,255:35,0 chr1 64644237 . C . PASS END=64644237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr1 64644238 . A . PASS END=64644239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1341:0,98,255:34,0 chr1 64644240 . C . PASS END=64644240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 64644241 . A . PASS END=64644245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1357:0,81,255:34,0 chr1 64644246 . C . PASS END=64644247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:31,0 chr1 64644248 . C . PASS END=64644251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr1 64644252 . G . PASS END=64644254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1270:0,72,255:28,0 chr1 64644255 . T . PASS END=64644255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 64644256 . G . PASS END=64644256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:27,0 chr1 64644257 . A . PASS END=64644258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,95,255:31,0 chr1 64644259 . T . PASS END=64644259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:27,0 chr1 64644260 . C . PASS END=64644261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1215:0,89,255:27,0 chr1 64644262 . G . PASS END=64644266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 64644267 . G . PASS END=64644269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 64644270 . C . PASS END=64644298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 64644299 . G . PASS END=64644343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1055:0,84,255:40,0 chr1 64644344 . T . PASS END=64644344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:37,0 chr1 64644345 . C . PASS END=64644538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:35:0,96,1440:0,104,255:40,0 chr1 64669734 . A . PASS END=64669734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 64669735 . T . PASS END=64669736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 64669737 . C . PASS END=64669737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 64669738 . A . PASS END=64669738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 64669739 . C . PASS END=64669739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 64669740 . G . PASS END=64669752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr1 64669753 . T . PASS END=64669753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:28,0 chr1 64669754 . C . PASS END=64669799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1091:0,80,255:32,0 chr1 64671322 . G . PASS END=64671403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:53:0,120,1800:0,129,255:40,0 chr1 64672447 . G . PASS END=64672539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,113,1541:0,113,255:40,0 chr1 64676425 . T . PASS END=64676522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:44:0,120,1800:0,132,255:40,0 chr1 64680498 . G . PASS END=64680615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1215:0,96,255:40,0 chr1 64683737 . A . PASS END=64683737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr1 64686542 . T . PASS END=64686590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,157,255:40,0 chr1 64692813 . T . PASS END=64692897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:82:0,120,1800:0,196,255:40,0 chr1 64698244 . A . PASS END=64698332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:72:0,120,1800:0,200,255:40,0 chr1 64707335 . T . PASS END=64707416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,170,255:40,0 chr1 64709813 . A . PASS END=64709842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,189,255:40,0 chr1 64726286 . G . PASS END=64726376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,109,1710:0,109,255:40,0 chr1 64726377 . A . PASS END=64726377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,114,1710:0,141,255:38,0 chr1 64732695 . T . PASS END=64732891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:32:0,95,1172:0,95,255:40,0 chr1 64936428 . A . PASS END=64936432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 64936433 . C . PASS END=64936433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 64936434 . C . PASS END=64936443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 64936444 . A . PASS END=64936444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 64936445 . G . PASS END=64936449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 64936450 . A . PASS END=64936450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 64936451 . G . PASS END=64936454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 64936455 . A . PASS END=64936482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 64936483 . C . PASS END=64936502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 64936503 . G . PASS END=64936505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 64936506 . G . PASS END=64936519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,692:0,50,255:19,0 chr1 64936520 . G . PASS END=64936526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 64936527 . G . PASS END=64936527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 64936528 . G . PASS END=64936547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:24,0 chr1 64936548 . A . PASS END=64936555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1125:0,80,255:30,0 chr1 64936556 . C . PASS END=64936557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 64936558 . A . PASS END=64936572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1194:0,90,255:33,0 chr1 64936573 . C . PASS END=64936573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr1 64936574 . G . PASS END=64936625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:92:33:0,92,1219:0,92,255:40,0 chr1 64972166 . A . PASS END=64972170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,255,255:40,0 chr1 65016277 . C . PASS END=65016311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,120,1800:0,125,255:40,0 chr1 65016312 . C . PASS END=65016339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,141,255:40,0 chr1 65047839 . C . PASS END=65047987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:35:0,91,1395:0,91,255:40,0 chr1 65068489 . A . PASS END=65068489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1300:0,59,255:36,0 chr1 65068490 . T . PASS END=65068595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:37:0,98,1358:0,98,255:40,0 chr1 65095038 . T . PASS END=65095158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:35:0,84,1260:0,105,255:40,0 chr1 65095159 . C . PASS END=65095164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:33:0,60,900:0,83,255:26,0 chr1 65098282 . A . PASS END=65098426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:36:0,102,1393:0,108,255:40,0 chr1 65099727 . A . PASS END=65099733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:19,0 chr1 65099734 . T . PASS END=65099739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 65099740 . C . PASS END=65099740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,588:0,27,255:18,0 chr1 65099741 . T . PASS END=65099744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:25,0 chr1 65099745 . G . PASS END=65099745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 65099746 . C . PASS END=65099747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 65099748 . G . PASS END=65099766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:26,0 chr1 65099767 . C . PASS END=65099790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1178:0,83,255:32,0 chr1 65099791 . T . PASS END=65099791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:26,0 chr1 65099792 . C . PASS END=65099793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 65099794 . T . PASS END=65099795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 65099796 . T . PASS END=65099796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:24,0 chr1 65099797 . C . PASS END=65099798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:26,0 chr1 65099799 . C . PASS END=65099802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 65099803 . C . PASS END=65099803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 65099804 . C . PASS END=65099809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 65099810 . T . PASS END=65099810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 65099811 . G . PASS END=65099813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 65099814 . A . PASS END=65099814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,947:0,53,255:26,0 chr1 65099815 . C . PASS END=65099818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 65099819 . A . PASS END=65099821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,923:0,67,255:26,0 chr1 65099822 . G . PASS END=65099824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 65099825 . A . PASS END=65099828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 65099829 . T . PASS END=65099829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:24,0 chr1 65099830 . C . PASS END=65099832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 65099833 . C . PASS END=65099864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:33,0 chr1 65099865 . C . PASS END=65099867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 65099868 . A . PASS END=65099884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,83,255:30,0 chr1 65099885 . A . PASS END=65099885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 65099886 . T . PASS END=65099905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 65099906 . G . PASS END=65099940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,901:0,64,255:26,0 chr1 65099941 . C . PASS END=65099943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 65107503 . A . PASS END=65107510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1081:0,86,255:34,0 chr1 65107511 . A . PASS END=65107511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:8:36:0,8,1119:0,8,255:31,0 chr1 65107512 . T . PASS END=65107513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1272:0,92,255:35,0 chr1 65107514 . G . PASS END=65107514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr1 65107515 . T . PASS END=65107515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:50:37:0,50,1257:0,50,255:30,0 chr1 65107516 . C . PASS END=65107516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:23:37:0,23,1183:0,23,255:27,0 chr1 65107517 . A . PASS END=65107517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1172:0,39,255:28,0 chr1 65107518 . T . PASS END=65107519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:80:43:0,80,1463:0,80,255:37,0 chr1 65107520 . A . LowGQ END=65107520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:0:45:0,0,1343:6,0,255:35,0 chr1 65107521 . T . PASS END=65107525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:45:0,88,1588:0,88,255:40,0 chr1 65107526 . C . LowGQ END=65107526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,8:43:0:43:0,0,1142:48,0,255:35,0 chr1 65107527 . T . PASS END=65107527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1454:0,90,255:40,0 chr1 65107528 . G . PASS END=65107528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1435:0,60,255:40,0 chr1 65107529 . T . PASS END=65107530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:44:0,85,1504:0,85,255:40,0 chr1 65107531 . A . PASS END=65107531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:33:46:0,33,1422:0,33,255:40,0 chr1 65107532 . G . PASS END=65107532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,107,1639:0,107,255:40,0 chr1 65107533 . C . LowGQ END=65107533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:46:0,0,1277:14,0,255:38,0 chr1 65107534 . T . PASS END=65107536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,130,255:40,0 chr1 65107537 . C . LowGQ END=65107537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,8:49:0:49:0,0,1352:22,0,255:40,0 chr1 65107538 . A . PASS END=65107542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:84:49:0,84,1573:0,84,255:40,0 chr1 65107543 . A . PASS END=65107543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:70:50:0,70,1657:0,70,255:40,0 chr1 65107544 . T . PASS END=65107544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,113,1565:0,113,255:40,0 chr1 65107545 . C . LowGQ END=65107545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,7:49:0:49:0,0,1446:5,0,255:40,0 chr1 65107546 . A . PASS END=65107547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,103,1600:0,103,255:40,0 chr1 65107548 . A . LowGQ END=65107548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,11:50:0:50:0,0,1127:47,0,255:37,0 chr1 65107549 . G . PASS END=65107551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:86:51:0,86,1533:0,86,255:40,0 chr1 65107552 . C . PASS END=65107552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,7:54:46:54:0,46,1565:0,46,255:40,0 chr1 65107553 . T . PASS END=65107553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:84:54:0,84,1675:0,84,255:40,0 chr1 65107554 . C . LowGQ END=65107554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,13:57:0:57:0,0,1394:44,0,255:40,0 chr1 65107555 . T . PASS END=65107556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:57:0,120,1800:0,137,255:40,0 chr1 65107557 . C . LowGQ END=65107557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,9:57:0:57:0,0,1494:37,0,255:40,0 chr1 65107558 . G . PASS END=65107558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,154,255:40,0 chr1 65107559 . G . LowGQ END=65107559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,12:59:0:59:0,0,1475:44,0,255:40,0 chr1 65107560 . A . PASS END=65107561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:80:59:0,80,1793:0,80,255:40,0 chr1 65107562 . G . LowGQ END=65107562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,11:59:0:59:0,0,1554:20,0,255:40,0 chr1 65107563 . A . PASS END=65107564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:99:56:0,101,1756:0,101,255:40,0 chr1 65107565 . G . LowGQ END=65107565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,14:56:0:56:0,0,1264:122,0,255:40,0 chr1 65107566 . A . PASS END=65107566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 65107567 . T . PASS END=65107567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:32:56:0,32,1570:0,32,255:40,0 chr1 65107568 . A . PASS END=65107572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,151,255:40,0 chr1 65107573 . A . PASS END=65107573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,8:56:35:56:0,35,1482:0,35,255:40,0 chr1 65107574 . G . PASS END=65107618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,120,1800:0,130,255:40,0 chr1 65107619 . T . PASS END=65107643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,102,1530:0,113,255:40,0 chr1 65107644 . T . PASS END=65107644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1333:0,70,255:33,0 chr1 65107645 . C . PASS END=65107652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,97,255:34,0 chr1 65113484 . A . PASS END=65113530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,101,1207:0,101,255:39,0 chr1 65113531 . G . PASS END=65113567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1407:0,84,255:40,0 chr1 65113568 . T C, 165.52 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,20,0:0,20,0:116:203,119,0,303,303,303:255,123,0:0,0:1.6552e+02,1.1552e+02,0.0000e+00,3.0029e+02,3.3506e+02,3.0330e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,21:0,0,21,19 chr1 65113569 . G . PASS END=65113605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1427:0,95,255:38,0 chr1 65113606 . A . PASS END=65113629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1302:0,89,255:35,0 chr1 65113630 . A . PASS END=65113630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 65113631 . C . PASS END=65113700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,81,255:39,0 chr1 65113701 . T . PASS END=65113701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 65113702 . G . PASS END=65113703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 65113704 . T . PASS END=65113717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,903:0,64,255:26,0 chr1 65117844 . G . PASS END=65117993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,146,255:40,0 chr1 65119441 . G . PASS END=65119564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:54:0,120,1800:0,154,255:40,0 chr1 65120369 . C . PASS END=65120385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:33:0,97,1271:0,97,255:39,0 chr1 65120386 . A . PASS END=65120386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1402:0,65,255:37,0 chr1 65120387 . G . PASS END=65120394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr1 65120395 . C . PASS END=65120431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,137,255:40,0 chr1 65120432 . C T, 48.42 PASS DP=58;MQ=249.42;MQRankSum=6.469;ReadPosRankSum=4.962;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,25,0:0.431,0.000:58:13,11,0:20,14,0:47:83,0,50,894,1134,2028:255,0,255:29,0:4.8419e+01,8.4130e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,14,9,16:17,16,9,16 chr1 65120433 . A . PASS END=65120469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,131,255:40,0 chr1 65120470 . G . PASS END=65120486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,109,1415:0,109,255:40,0 chr1 65124388 . G . PASS END=65124400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:25,0 chr1 65124401 . C . PASS END=65124421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1009:0,84,255:30,0 chr1 65124422 . T . PASS END=65124422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 65124423 . G . PASS END=65124435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 65124436 . A . PASS END=65124437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:29,0 chr1 65124438 . A . PASS END=65124498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1161:0,80,255:34,0 chr1 65124499 . C . PASS END=65124499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 65124500 . T . PASS END=65124503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 65124504 . T . PASS END=65124527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,945:0,62,255:26,0 chr1 65124528 . C . PASS END=65124556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,46,255:19,0 chr1 65129378 . A . PASS END=65129520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1175:0,88,255:40,0 chr1 65130181 . T . PASS END=65130184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 65130185 . C . PASS END=65130334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,956:0,81,255:40,0 chr1 65130335 . A . PASS END=65130335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 65130336 . A . PASS END=65130339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 65130340 . T . PASS END=65130359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr1 65130360 . A . PASS END=65130362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 65131740 . G . PASS END=65131847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:61:0,120,1800:0,167,255:40,0 chr1 65131848 . C . PASS END=65131850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,173,255:40,0 chr1 65137247 . T . PASS END=65137369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,120,1800:0,128,255:40,0 chr1 65138841 . G . PASS END=65138865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,132,255:40,0 chr1 65138866 . T . PASS END=65138940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:65:0,120,1800:0,152,255:40,0 chr1 65139031 . G . PASS END=65139147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,101,1530:0,101,255:40,0 chr1 65141084 . G . PASS END=65141244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:87:35:0,87,1298:0,88,255:40,0 chr1 65141580 . A . PASS END=65141629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,120,1800:0,122,255:40,0 chr1 65141630 . A . PASS END=65141660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:50:0,81,1215:0,132,255:40,0 chr1 65141661 . G . PASS END=65141664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:60:48:0,60,990:0,60,255:24,0 chr1 65141665 . C . PASS END=65141666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:54:45:0,54,810:0,135,255:19,0 chr1 65142578 . A . PASS END=65142694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:38:0,85,1440:0,85,255:40,0 chr1 65143842 . G . PASS END=65143855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1066:0,87,255:33,0 chr1 65143856 . T . PASS END=65143856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:32,0 chr1 65143857 . G . PASS END=65143989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1205:0,83,255:40,0 chr1 65143990 . A . PASS END=65143993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:26,0 chr1 65145278 . G . PASS END=65145283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,881:0,62,255:26,0 chr1 65145284 . A . PASS END=65145284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,768:0,45,255:24,0 chr1 65145285 . G . PASS END=65145290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 65145291 . C . PASS END=65145308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,948:0,81,255:29,0 chr1 65145309 . A . PASS END=65145309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 65145310 . A . PASS END=65145314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,922:0,84,255:28,0 chr1 65145315 . C . PASS END=65145315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 65145316 . C . PASS END=65145335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:33:0,80,1290:0,80,255:35,0 chr1 65145336 . A . PASS END=65145336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr1 65145337 . G . PASS END=65145416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,85,255:40,0 chr1 65145417 . T . PASS END=65145439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 65146941 . A . PASS END=65146964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:31:0,85,1045:0,85,255:34,0 chr1 65146965 . T . PASS END=65147001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1220:0,86,255:35,0 chr1 65147002 . C T, 48.91 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=4.122;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:8,8,0:10,6,0:47:84,0,50,501,642,1143:255,0,255:17,0:4.8908e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,8,6:10,8,4,10 chr1 65147003 . G . PASS END=65147016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1119:0,93,255:31,0 chr1 65147017 . C . PASS END=65147018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 65147688 . T . PASS END=65147789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:46:0,118,1800:0,118,255:40,0 chr1 65157006 . G . PASS END=65157013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,915:0,65,255:26,0 chr1 65157014 . A . PASS END=65157018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 65157019 . G . PASS END=65157019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 65157020 . A . PASS END=65157137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,994:0,81,255:37,0 chr1 65157138 . T . PASS END=65157138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:33,0 chr1 65157139 . A . PASS END=65157153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1194:0,86,255:34,0 chr1 65157154 . C . PASS END=65157154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1103:0,47,255:28,0 chr1 65157155 . C . PASS END=65157167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1163:0,80,255:30,0 chr1 65157168 . C . PASS END=65157175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1035:0,60,255:26,0 chr1 65157176 . C . PASS END=65157176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 65157177 . C . PASS END=65157186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:27:0,78,1170:0,81,255:26,0 chr1 65157187 . T . PASS END=65157187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:25,0 chr1 65157188 . C . PASS END=65157212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr1 65157213 . T . PASS END=65157235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:42:17:0,42,630:0,47,255:17,0 chr1 65157236 . G . PASS END=65157236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 65157237 . A . PASS END=65157241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 65157242 . T . PASS END=65157242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 65157243 . A . PASS END=65157244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 65210856 . A . LowDepth;LowGQ END=65210897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 65210898 . G . LowDepth END=65210913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr1 65210914 . C . PASS END=65210928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 65210929 . G . PASS END=65210950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 65210951 . C T, 0.33 DRAGENSnpHardQUAL DP=5;MQ=247.26;MQRankSum=-0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:2,1,0:2,0,0:11:24,0,50,36,138,174:16,0,118:4,0:3.2857e-01,1.1376e+01,6.4376e+01,4.7136e+01,1.8407e+02,1.8806e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,0,1:2,2,0,1 chr1 65210952 . C . PASS END=65210957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 65210958 . G . PASS END=65210961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 65210962 . A . PASS END=65210962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 65210963 . A . PASS END=65210963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 65210964 . G . PASS END=65210976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 65210977 . C . PASS END=65210988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 65210989 . T . PASS END=65210992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 65210993 . C . PASS END=65210993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 65210994 . G . PASS END=65211012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 65211013 . A . LowGQ END=65211013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 65211014 . G . PASS END=65211042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 65211043 . G . PASS END=65211043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 65211044 . G . PASS END=65211061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 65211062 . G . PASS END=65211062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 65211063 . A . PASS END=65211063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 65211064 . A . PASS END=65211101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 65211102 . C . PASS END=65211104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,197:5,0 chr1 65234339 . G . PASS END=65234405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:80:0,120,1800:0,215,255:40,0 chr1 65243306 . C . PASS END=65243307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:16,0 chr1 65243308 . T . PASS END=65243317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,67,255:27,0 chr1 65243318 . T . PASS END=65243775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:28:0,84,1017:0,84,255:40,0 chr1 65247063 . C . PASS END=65247068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 65247069 . C . PASS END=65247069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 65247070 . A . PASS END=65247070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 65247071 . G . PASS END=65247084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:23:0,62,856:0,62,255:26,0 chr1 65247085 . A . PASS END=65247085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,892:0,34,255:25,0 chr1 65247086 . C . PASS END=65247088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr1 65247089 . T . PASS END=65247089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 65247090 . G . PASS END=65247095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1027:0,84,255:29,0 chr1 65247096 . T . PASS END=65247096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:28,0 chr1 65247097 . T . PASS END=65247105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:30,0 chr1 65247106 . T . PASS END=65247106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr1 65247107 . T . PASS END=65247153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:30:0,90,1052:0,90,255:39,0 chr1 65247154 . A . PASS END=65247154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:38,0 chr1 65247155 . C . PASS END=65247220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:41:0,81,1215:0,116,255:40,0 chr1 65247221 . T . PASS END=65247238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:28:0,60,900:0,84,255:26,0 chr1 65247239 . A . PASS END=65247254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:17,0 chr1 65255071 . A . PASS END=65255197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:56:0,120,1800:0,141,255:40,0 chr1 65268659 . C . PASS END=65268741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:36:0,93,1343:0,93,255:40,0 chr1 65268742 . C . PASS END=65268742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1398:0,71,255:32,0 chr1 65268743 . A . PASS END=65268744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 65270417 . A . PASS END=65270521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:83:0,120,1800:0,228,255:40,0 chr1 65270674 . A . PASS END=65270785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:30:0,81,1215:0,86,255:40,0 chr1 65270786 . A . PASS END=65270786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 65270787 . A . PASS END=65270788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 65272889 . C . PASS END=65272900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 65272901 . T . PASS END=65272905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 65272906 . A . PASS END=65272906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:20,0 chr1 65272907 . C . PASS END=65272921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:24,0 chr1 65272922 . C . PASS END=65272934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 65272935 . C . PASS END=65272935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:26,0 chr1 65272936 . A . PASS END=65272940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 65272941 . A . PASS END=65272941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 65272942 . C . PASS END=65272946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,836:0,80,255:27,0 chr1 65272947 . C . PASS END=65272947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 65272948 . T . PASS END=65272960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:29,0 chr1 65272961 . A . PASS END=65272961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 65272962 . C . PASS END=65272967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 65272968 . T . PASS END=65272968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 65272969 . G . PASS END=65272970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 65272971 . A . PASS END=65272971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 65272972 . C . PASS END=65272976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 65272977 . T . PASS END=65272983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr1 65272984 . G . PASS END=65273033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1150:0,87,255:34,0 chr1 65273034 . A . PASS END=65273034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1150:0,71,255:32,0 chr1 65273035 . G . PASS END=65273105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1125:0,82,255:34,0 chr1 65273106 . A . PASS END=65273129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 65273130 . G . PASS END=65273134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 65273135 . A . PASS END=65273140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 65273141 . C . PASS END=65273157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 65278421 . G . PASS END=65278532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:84:38:0,84,1260:0,114,255:40,0 chr1 65280387 . C . PASS END=65280387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 65280388 . C . PASS END=65280388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 65280389 . C . PASS END=65280391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1327:0,95,255:36,0 chr1 65280392 . G . PASS END=65280393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1308:0,72,255:33,0 chr1 65280394 . A . PASS END=65280513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,81,255:40,0 chr1 65280514 . T . PASS END=65280523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:28:0,72,1080:0,72,255:26,0 chr1 65296522 . G . PASS END=65296534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 65296535 . G . PASS END=65296536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,926:0,84,255:28,0 chr1 65296537 . A . PASS END=65296537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 65296538 . A . PASS END=65296549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1048:0,84,255:29,0 chr1 65296550 . G . PASS END=65296552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1015:0,71,255:26,0 chr1 65296553 . C . PASS END=65296668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:34:0,84,1294:0,84,255:40,0 chr1 65300245 . T . PASS END=65300340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,111,1742:0,111,255:40,0 chr1 65301079 . C . PASS END=65301189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:34:0,92,1286:0,92,255:40,0 chr1 65301781 . A . PASS END=65301898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,102,1335:0,102,255:40,0 chr1 65303615 . C . PASS END=65303783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,980:0,81,255:40,0 chr1 65303784 . T . PASS END=65303787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 65304148 . C . PASS END=65304272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:58:0,120,1800:0,173,255:40,0 chr1 65305286 . C . PASS END=65305451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:32:0,81,1215:0,92,255:40,0 chr1 65305452 . G . PASS END=65305463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,79,255:25,0 chr1 65305464 . C . PASS END=65305472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,737:0,49,255:19,0 chr1 65305473 . G . PASS END=65305473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 65305474 . T . PASS END=65305478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 65306928 . C . PASS END=65306987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:37:0,86,1297:0,86,255:40,0 chr1 65306988 . A . PASS END=65306988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1608:0,78,255:39,0 chr1 65306989 . G . PASS END=65306995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,125,255:40,0 chr1 65306996 . G . PASS END=65306996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1598:0,61,255:40,3 chr1 65306997 . T . PASS END=65306997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:32:47:0,32,1402:0,32,255:40,2 chr1 65306998 . T . PASS END=65306998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1596:0,69,255:40,0 chr1 65306999 . T . PASS END=65307022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,104,1575:0,104,255:40,0 chr1 65307134 . T . PASS END=65307158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:37,0 chr1 65307159 . T . PASS END=65307159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:33,0 chr1 65307160 . C . PASS END=65307266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1215:0,83,255:40,0 chr1 65307267 . T . PASS END=65307284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:25:0,63,945:0,64,255:26,0 chr1 65309747 . C . PASS END=65309898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:37:0,93,1264:0,93,255:40,0 chr1 65310437 . C . PASS END=65310437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 65310438 . T . PASS END=65310438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 65310439 . T . PASS END=65310522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:35:0,82,1311:0,82,255:40,0 chr1 65310523 . A . PASS END=65310523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:49:44:0,49,1197:0,49,255:37,0 chr1 65310524 . G . PASS END=65310528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:82:43:0,82,1233:0,82,255:40,0 chr1 65310529 . A . PASS END=65310529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:46:43:0,46,1142:0,46,255:36,0 chr1 65310530 . G . PASS END=65310539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:42:0,98,1349:0,98,255:40,0 chr1 65310540 . A . PASS END=65310541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1244:0,76,255:36,0 chr1 65310542 . A . PASS END=65310549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:42:0,90,1407:0,90,255:39,0 chr1 65310550 . C . PASS END=65310550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:43:42:0,43,1158:0,43,255:32,0 chr1 65310551 . C . PASS END=65310552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1393:0,109,255:37,0 chr1 65310553 . T . PASS END=65310553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1246:0,79,255:33,0 chr1 65310554 . G . PASS END=65310559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:93:40:0,93,1395:0,103,255:34,0 chr1 65310560 . G . PASS END=65310561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1213:0,69,255:28,0 chr1 65310562 . T . PASS END=65310563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1305:0,100,255:29,0 chr1 65310564 . T . PASS END=65310564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:22:37:0,22,1024:0,22,255:26,0 chr1 65310565 . T . PASS END=65310567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,91,255:29,0 chr1 65310568 . T . PASS END=65310568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 65310569 . C . PASS END=65310569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:15:32:0,15,856:0,15,255:23,0 chr1 65310570 . C . PASS END=65310572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,76,255:25,0 chr1 65311196 . C . PASS END=65311224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,106,1665:0,106,255:40,0 chr1 65311225 . T . PASS END=65311261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,131,255:40,0 chr1 65311262 . G A, 48.19 PASS DP=58;MQ=250.00;MQRankSum=6.433;ReadPosRankSum=1.602;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,24,0:0.414,0.000:58:17,10,0:17,14,0:46:83,0,47,183,183,183:255,0,255:34,0:4.8188e+01,1.0924e-04,5.0000e+01,1.8296e+02,2.1773e+02,1.8597e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,14,13,11:17,17,13,11 chr1 65311263 . C . PASS END=65311299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,119,1778:0,119,255:40,0 chr1 65311300 . C . PASS END=65311323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,118,1412:0,118,255:40,0 chr1 65312192 . T . PASS END=65312192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 65312193 . C . PASS END=65312193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:31,0 chr1 65312194 . A . PASS END=65312194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,941:0,46,255:29,0 chr1 65312195 . G . PASS END=65312196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr1 65312197 . C . PASS END=65312197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1099:0,74,255:32,0 chr1 65312198 . C . PASS END=65312198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,950:0,41,255:30,0 chr1 65312199 . C . PASS END=65312211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:91:36:0,91,1235:0,91,255:37,0 chr1 65312212 . A . PASS END=65312212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1238:0,75,255:35,0 chr1 65312213 . C . PASS END=65312419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:88:37:0,88,1208:0,88,255:40,0 chr1 65313215 . C . PASS END=65313358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:92:39:0,92,1458:0,92,255:40,0 chr1 65316487 . C . PASS END=65316593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,120,1800:0,128,255:40,0 chr1 65321192 . C . PASS END=65321366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:30:0,80,1113:0,80,255:40,0 chr1 65321367 . G . PASS END=65321367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:24,0 chr1 65321368 . G . PASS END=65321381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 65323339 . C . PASS END=65323462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,154,255:40,0 chr1 65325788 . C . PASS END=65325943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:33:0,82,1186:0,82,255:40,0 chr1 65325944 . T . PASS END=65325945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:65:32:0,65,1141:0,65,255:27,0 chr1 65330470 . C . PASS END=65330655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:92:34:0,92,1197:0,92,255:40,1 chr1 65332549 . A . PASS END=65332891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:38:0,90,1346:0,90,255:40,0 chr1 65334994 . C . PASS END=65335010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 65335011 . T . PASS END=65335011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 65335012 . T . PASS END=65335014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 65335015 . G . PASS END=65335019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:9,0 chr1 65335020 . C . PASS END=65335020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 65335021 . T . PASS END=65335033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr1 65335034 . T . PASS END=65335037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 65335038 . G . PASS END=65335043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 65335044 . G . PASS END=65335074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,677:0,62,255:25,0 chr1 65335075 . C . PASS END=65335139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,983:0,84,255:33,0 chr1 65335140 . C . PASS END=65335157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 65339053 . C . PASS END=65339084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,128,255:40,0 chr1 65339085 . C . PASS END=65339121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,123,255:40,2 chr1 65339122 . G A, 50.00 PASS DP=62;MQ=249.94;MQRankSum=6.332;ReadPosRankSum=5.655;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,32,0:0.516,0.000:62:13,16,0:17,16,0:48:85,0,50,1107,1073,2180:255,0,255:27,0:5.0000e+01,6.5492e-05,5.2925e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,15,17:13,17,19,13 chr1 65339123 . T . PASS END=65339159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,170,255:40,0 chr1 65339160 . C . PASS END=65339206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,117,1554:0,118,255:40,0 chr1 65342096 . T . PASS END=65342107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:22,0 chr1 65342108 . A . PASS END=65342156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1084:0,83,255:33,0 chr1 65344708 . C . PASS END=65344828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,86,255:40,0 chr1 65344829 . T . PASS END=65344831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 65348688 . T . PASS END=65348701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:85:44:0,85,1443:0,85,255:40,0 chr1 65348702 . C . PASS END=65348702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1429:0,71,255:40,0 chr1 65348703 . T . PASS END=65348713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:45:0,96,1570:0,96,255:40,0 chr1 65348714 . A . PASS END=65348714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:29:49:0,29,1322:0,29,255:40,0 chr1 65348715 . G . PASS END=65348746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:45:0,88,1399:0,88,255:40,0 chr1 65348960 . G . PASS END=65348984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 65348985 . C . PASS END=65348985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 65348986 . A . PASS END=65349040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,776:0,62,255:26,0 chr1 65349041 . G . PASS END=65349043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 65349044 . A . PASS END=65349044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 65349045 . G . PASS END=65349045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 65349046 . A . PASS END=65349052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 65349053 . C . PASS END=65349053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 65349054 . T . PASS END=65349058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 65349059 . C . PASS END=65349063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 65349064 . G . PASS END=65349064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 65349065 . G . PASS END=65349072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 65349073 . G . PASS END=65349098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,905:0,62,255:26,0 chr1 65349099 . G . PASS END=65349102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 65349103 . C . PASS END=65349107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 65349108 . C . PASS END=65349108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 65349109 . A . PASS END=65349111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 65349112 . T . PASS END=65349112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 65349113 . T . PASS END=65349126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 65349127 . A . PASS END=65349151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 65349152 . T . PASS END=65349152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 65349153 . T . PASS END=65349153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 65349154 . A . PASS END=65349154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 65349155 . G . PASS END=65349158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 65351942 . C . PASS END=65351947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:98:0,120,1800:0,255,255:40,0 chr1 65514385 . T . PASS END=65514385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:17,0 chr1 65514386 . C . PASS END=65514398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,737:0,57,255:19,0 chr1 65514399 . A . PASS END=65514412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:23,0 chr1 65514413 . C . PASS END=65514415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 65514416 . T . PASS END=65514416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr1 65514417 . T . PASS END=65514417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 65514418 . A . PASS END=65514418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 65514419 . A . PASS END=65514422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1157:0,93,255:31,0 chr1 65514423 . G . PASS END=65514423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 65514424 . C . PASS END=65514459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1127:0,80,255:40,0 chr1 65514460 . T . PASS END=65514504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:42:0,81,1215:0,101,255:35,1 chr1 65514505 . AAT A, 49.80 PASS DP=57;MQ=250.00;MQRankSum=6.449;ReadPosRankSum=-1.274;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,26,0:0.456,0.000:57:11,13,0:20,13,0:47:80,0,47,180,180,180:255,0,255:28,43:4.9796e+01,8.9049e-05,5.0000e+01,1.8457e+02,2.1457e+02,1.8758e+02:0.00,30.00,33.01,34.77,64.77,37.78:21,10,20,6:11,20,15,11 chr1 65514506 . A . LowGQ END=65514508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:30,43:73:0:58:0,0,0:255,0,255:40,42 chr1 65514509 . T . PASS END=65514553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:97:56:0,97,1800:0,97,255:40,1 chr1 65514554 . G . PASS END=65514607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:40:0,106,1559:0,106,255:40,0 chr1 65532311 . C . PASS END=65532322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,901:0,62,255:26,0 chr1 65532323 . C . PASS END=65532339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:29,0 chr1 65532340 . A . PASS END=65532341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,942:0,70,255:28,0 chr1 65532342 . C . PASS END=65532342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,886:0,40,255:24,0 chr1 65532343 . G . PASS END=65532344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 65532345 . C . PASS END=65532355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:27:0,68,1022:0,68,255:26,0 chr1 65532356 . C . PASS END=65532363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 65532364 . G . PASS END=65532364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 65532365 . G . PASS END=65532365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 65532366 . G . PASS END=65532366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 65532367 . G . PASS END=65532372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,1 chr1 65532373 . C . PASS END=65532373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 65532374 . C . PASS END=65532374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 65532375 . T . PASS END=65532375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:27,0 chr1 65532376 . C . PASS END=65532386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1141:0,82,255:31,0 chr1 65532387 . G . PASS END=65532387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 65532388 . C . PASS END=65532389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 65532390 . G . PASS END=65532390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 65532391 . C . PASS END=65532401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1097:0,80,255:32,0 chr1 65532402 . A . PASS END=65532402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:29,0 chr1 65532403 . C . PASS END=65532406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 65532407 . G . PASS END=65532407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr1 65532408 . G . PASS END=65532409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:29,0 chr1 65532410 . C . PASS END=65532410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1025:0,44,255:28,0 chr1 65532411 . T . PASS END=65532413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1132:0,88,255:31,0 chr1 65532414 . C . PASS END=65532414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:31,0 chr1 65532415 . T . PASS END=65532467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,1133:0,82,255:38,0 chr1 65532468 . G . PASS END=65532468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,980:0,38,255:28,0 chr1 65532469 . A . PASS END=65532471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 65532472 . C . PASS END=65532472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 65532473 . C . PASS END=65532473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 65532474 . T . PASS END=65532474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 65532475 . C . PASS END=65532477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 65532478 . G . PASS END=65532478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 65532479 . C . PASS END=65532484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 65532485 . C . PASS END=65532485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 65533287 . C . PASS END=65533287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 65533288 . T . PASS END=65533291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 65533292 . C . PASS END=65533308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 65533309 . C . PASS END=65533309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr1 65533310 . T . PASS END=65533324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 65533325 . C . PASS END=65533325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 65533326 . T . PASS END=65533331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 65533332 . C . PASS END=65533332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 65533333 . T . PASS END=65533334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 65533335 . T . PASS END=65533336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 65533337 . T . PASS END=65533340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 65533341 . T . PASS END=65533341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 65614091 . A . PASS END=65614092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 65614093 . G . PASS END=65614093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 65614094 . G . PASS END=65614112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr1 65614113 . C . PASS END=65614113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 65614114 . G . PASS END=65614117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 65614118 . A . PASS END=65614118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 65614119 . T . PASS END=65614119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 65614120 . C . PASS END=65614120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 65614121 . C . PASS END=65614126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 65614127 . C . PASS END=65614127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 65614128 . C . PASS END=65614130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 65614131 . C . PASS END=65614131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:11,0 chr1 65614132 . C . PASS END=65614133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 65614134 . G . PASS END=65614137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 65614138 . G . PASS END=65614138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 65614139 . G . PASS END=65614142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 65614143 . A . PASS END=65614144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 65614145 . G . PASS END=65614145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 65614146 . G . PASS END=65614147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 65614148 . A . PASS END=65614148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 65614149 . C . PASS END=65614152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:22,0 chr1 65614153 . G . PASS END=65614153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 65614154 . T . PASS END=65614154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr1 65614155 . G . PASS END=65614158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 65614159 . G . PASS END=65614159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 65614160 . A . PASS END=65614172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr1 65614173 . A . PASS END=65614173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 65614174 . C . PASS END=65614206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,650:0,62,255:22,0 chr1 65614207 . C . PASS END=65614207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 65614208 . T . PASS END=65614211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 65614212 . G . PASS END=65614218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 65614219 . C . PASS END=65614219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 65614220 . A . PASS END=65614220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 65614221 . T . PASS END=65614222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 65614223 . A . PASS END=65614235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 65656393 . A . PASS END=65656395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 65656396 . T . PASS END=65656396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 65656397 . T . PASS END=65656403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 65656404 . A . PASS END=65656404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,626:0,49,255:21,0 chr1 65656405 . T . PASS END=65656410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,829:0,66,255:22,0 chr1 65656411 . A . PASS END=65656411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,691:0,49,255:20,0 chr1 65656412 . G . PASS END=65656415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:26:0,65,961:0,65,255:27,0 chr1 65656416 . T . PASS END=65656418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 65656419 . A . PASS END=65656419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 65656420 . T . PASS END=65656424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:30,0 chr1 65656425 . A . PASS END=65656426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr1 65656427 . A . PASS END=65656433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:31,0 chr1 65656434 . T . PASS END=65656434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 65656435 . T . PASS END=65656435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 65656436 . G . PASS END=65656436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 65656437 . G . PASS END=65656447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1185:0,80,255:30,0 chr1 65656448 . T . PASS END=65656448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 65656449 . G . PASS END=65656449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 65656450 . T . PASS END=65656450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,0 chr1 65656451 . G . PASS END=65656455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1218:0,93,255:32,0 chr1 65656456 . C . PASS END=65656456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr1 65656457 . A . PASS END=65656489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1180:0,83,255:33,0 chr1 65656490 . T . PASS END=65656490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:27,0 chr1 65656491 . G . PASS END=65656493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 65656494 . C . PASS END=65656494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 65656495 . A . PASS END=65656495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:23,0 chr1 65656496 . G . PASS END=65656502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:23,0 chr1 65656503 . C . PASS END=65656512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 65684437 . G . PASS END=65684448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:25,0 chr1 65684449 . C . PASS END=65684455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 65684456 . A . PASS END=65684458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 65684459 . A . PASS END=65684462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:31,0 chr1 65684463 . G . PASS END=65684585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1117:0,82,255:40,0 chr1 65684586 . G . PASS END=65684605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:22:0,63,945:0,66,255:23,0 chr1 65684606 . A . PASS END=65684606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:20,0 chr1 65684607 . C . PASS END=65684607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 65684608 . A . PASS END=65684608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 65684609 . T . PASS END=65684609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 65690435 . G . PASS END=65690445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,102,1250:0,102,255:38,0 chr1 65690446 . C . PASS END=65690446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1388:0,43,255:36,0 chr1 65690447 . G . PASS END=65690460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,103,1381:0,103,255:38,0 chr1 65690461 . G A, 43.67 PASS DP=41;MQ=203.44;MQRankSum=-0.176;ReadPosRankSum=2.666;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,15,0:0.366,0.000:41:12,8,0:14,7,0:43:78,0,50,520,914,1434:255,0,255:24,0:4.3671e+01,2.0839e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,10,5:14,12,9,6 chr1 65690462 . T . PASS END=65690498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,107,1488:0,107,255:40,0 chr1 65690499 . C . PASS END=65690549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:40,0 chr1 65690550 . A . PASS END=65690553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 65691746 . G . PASS END=65691858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1125:0,80,255:40,0 chr1 65691859 . G . PASS END=65691860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 65720218 . A . LowGQ END=65720231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,39:0,0,39:3,0 chr1 65720232 . G . PASS END=65720261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 65720262 . T . PASS END=65720262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 65720263 . T . PASS END=65720266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 65720267 . T . PASS END=65720267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 65720268 . G . PASS END=65720297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 65720298 . G . PASS END=65720329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 65720330 . A . PASS END=65720332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 65730594 . A . PASS END=65730615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,171,255:40,0 chr1 65775429 . A . PASS END=65775434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 65775435 . C . PASS END=65775447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 65775448 . A . PASS END=65775448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,844:0,59,255:23,0 chr1 65775449 . C . PASS END=65775468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 65775469 . A . PASS END=65775475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,983:0,81,255:28,0 chr1 65775476 . T . PASS END=65775476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 65775477 . G . PASS END=65775478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 65775479 . A . PASS END=65775479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 65775480 . T . PASS END=65775489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,973:0,87,255:30,0 chr1 65775490 . T . PASS END=65775490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 65775491 . G . PASS END=65775531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1048:0,80,255:32,0 chr1 65775532 . T . PASS END=65775532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1021:0,74,255:29,0 chr1 65775533 . T . PASS END=65775551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1149:0,84,255:31,0 chr1 65775552 . A . PASS END=65775574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,67,255:25,0 chr1 65775575 . T . PASS END=65775603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 65775604 . G . PASS END=65775617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,540:0,32,255:13,0 chr1 65775618 . T . PASS END=65775619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 65775620 . A . PASS END=65775620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,349:0,6,255:7,0 chr1 65775621 . G . PASS END=65775621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 65830318 . G . PASS END=65830319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 65830320 . G . PASS END=65830320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 65830321 . C . PASS END=65830323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,920:0,84,255:28,0 chr1 65830324 . C . PASS END=65830324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 65830325 . A . PASS END=65830326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,886:0,87,255:30,0 chr1 65830327 . C . PASS END=65830327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 65830328 . T . PASS END=65830328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 65830329 . C . PASS END=65830330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 65830331 . A . PASS END=65830331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 65830332 . G . PASS END=65830332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 65830333 . A . PASS END=65830335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 65830336 . T . PASS END=65830336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 65830337 . G . PASS END=65830344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:32:0,93,1277:0,96,255:37,0 chr1 65830345 . G . PASS END=65830464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:31:0,90,1350:0,93,255:40,0 chr1 65830465 . C . PASS END=65830468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:21,0 chr1 65831568 . C . PASS END=65831617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,142,255:40,0 chr1 65831731 . T . PASS END=65831879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:90:36:0,90,1317:0,90,255:40,0 chr1 65845085 . G . PASS END=65845207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1111:0,80,255:40,0 chr1 65849876 . G . PASS END=65850009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:33:0,87,1219:0,95,255:40,0 chr1 65851393 . A . PASS END=65851393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 65851395 . A . PASS END=65851396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:31,0 chr1 65851397 . A . PASS END=65851397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1059:0,60,255:29,0 chr1 65851398 . C . PASS END=65851589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:31:0,93,1097:0,93,255:40,0 chr1 65852495 . A . PASS END=65852612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:42:0,87,1305:0,102,255:40,0 chr1 65854019 . G . PASS END=65854098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,141,255:40,0 chr1 65854939 . G . PASS END=65855132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:44:0,120,1800:0,132,255:40,0 chr1 65855230 . G . PASS END=65855310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:54:0,120,1800:0,135,255:40,0 chr1 65858114 . A . PASS END=65858144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,962:0,72,255:26,0 chr1 65858145 . G A, 49.93 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=3.426;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:9,5,0:6,9,0:48:85,0,50,501,532,1032:255,0,255:14,0:4.9927e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,2,9,5:7,8,4,10 chr1 65858146 . G . PASS END=65858182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1260:0,87,255:36,0 chr1 65858183 . C . PASS END=65858201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1258:0,92,255:36,0 chr1 65858202 . A . PASS END=65858202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr1 65858203 . C . PASS END=65858230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:35,0 chr1 65858231 . G . PASS END=65858241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr1 65858242 . C . PASS END=65858251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 65858252 . A . PASS END=65858252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 65858253 . G . PASS END=65858257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 65858258 . C . PASS END=65858263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 65858264 . A . PASS END=65858266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 65858267 . A . PASS END=65858271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 65858272 . C . PASS END=65858275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 65858276 . A . PASS END=65858276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 65858277 . G . PASS END=65858282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 65858283 . A . PASS END=65858292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,77,255:26,0 chr1 65858293 . C . PASS END=65858294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:28:0,57,855:0,84,255:19,0 chr1 65858295 . C . PASS END=65858308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:21,0 chr1 65858309 . A . PASS END=65858319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr1 65858320 . C . PASS END=65858322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 65858323 . G . PASS END=65858336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 65858337 . G . PASS END=65858374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 65858375 . A . PASS END=65858375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 65858376 . T . PASS END=65858380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 65858381 . A . PASS END=65858393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 65858394 . C . PASS END=65858402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,848:0,64,255:26,0 chr1 65858403 . G . PASS END=65858407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 65858408 . G . PASS END=65858415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 65858416 . G . PASS END=65858416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 65858417 . C . PASS END=65858428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 65858429 . A . PASS END=65858433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:31,0 chr1 65858434 . G . PASS END=65858434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 65858435 . G . PASS END=65858527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1086:0,87,255:35,0 chr1 65858528 . C . PASS END=65858534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 65858535 . A . PASS END=65858548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 65860581 . G . PASS END=65860649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:87:35:0,87,1333:0,87,255:40,0 chr1 65860650 . A . PASS END=65860686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,146,255:40,0 chr1 65860687 . A C, 45.74 PASS DP=51;MQ=250.00;MQRankSum=5.971;ReadPosRankSum=2.923;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,20,0:0.392,0.000:51:16,9,0:15,11,0:45:81,0,50,686,1095,1781:255,0,255:28,0:4.5743e+01,1.3746e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,16,7,13:18,13,12,8 chr1 65860688 . A . PASS END=65860715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:42:0,87,1305:0,126,255:40,0 chr1 65864496 . C . PASS END=65864564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,105,1498:0,120,255:40,0 chr1 65867444 . G . PASS END=65867548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,105,1374:0,109,255:40,0 chr1 65867549 . A . PASS END=65867549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1465:0,79,255:34,0 chr1 65867550 . C . PASS END=65867563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:94:37:0,94,1304:0,94,255:37,0 chr1 65871550 . T . PASS END=65871550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 65871553 . G . PASS END=65871555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:9,0 chr1 65871556 . G . PASS END=65871629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:13,0 chr1 65871630 . A . PASS END=65871630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 65871631 . A . PASS END=65871643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 65871644 . G . PASS END=65871649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 65871650 . G . PASS END=65871770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:25,0 chr1 65871771 . A . PASS END=65871798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,44,255:19,0 chr1 65871799 . A . PASS END=65871801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 65871802 . G . PASS END=65871802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 65871803 . A . PASS END=65871803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 65871804 . T . PASS END=65871809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 65871810 . A . PASS END=65871810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 65871811 . A . PASS END=65871812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,444:0,42,255:14,0 chr1 65871813 . T . PASS END=65871816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 65874324 . A . PASS END=65874466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:50:0,120,1800:0,124,255:40,0 chr1 65876933 . A . PASS END=65876968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1072:0,80,255:31,0 chr1 65876969 . A . PASS END=65876969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 65876970 . G . PASS END=65876970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 65876971 . A . PASS END=65876971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 65876972 . G . PASS END=65877096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1215:0,87,255:40,0 chr1 65877097 . G . PASS END=65877097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 65877098 . C . PASS END=65877101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 65877102 . C . PASS END=65877109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,950:0,70,255:26,0 chr1 65878607 . G . PASS END=65878708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,123,255:40,0 chr1 65886358 . C . PASS END=65886358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 65886359 . C . PASS END=65886359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 65886400 . C . PASS END=65886400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 65886408 . A . PASS END=65886421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 65886422 . A . PASS END=65886423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 65887100 . A . PASS END=65887142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,158,255:40,0 chr1 65890986 . C . PASS END=65891061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,130,255:40,0 chr1 65893465 . A . PASS END=65893486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:72:0,120,1800:0,207,255:40,0 chr1 65895545 . C . PASS END=65895546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1141:0,90,255:35,0 chr1 65895547 . T . PASS END=65895547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:32,0 chr1 65895548 . T . PASS END=65895746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:36:0,104,1449:0,104,255:40,0 chr1 65895749 . T . PASS END=65895884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:40:0,81,1215:0,87,255:40,0 chr1 65897486 . A . PASS END=65897615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:28:0,80,1033:0,80,255:40,0 chr1 66031214 . A . PASS END=66031214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,232,255:40,0 chr1 66031249 . A . PASS END=66031288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:102:0,120,1800:0,255,255:40,0 chr1 66036156 . A . PASS END=66036463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:31:0,93,1116:0,93,255:40,0 chr1 66036464 . T . PASS END=66036485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:37:0,93,1395:0,100,255:36,0 chr1 66038000 . T . PASS END=66038000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:56:43:0,56,1500:0,56,255:38,1 chr1 66038007 . A . PASS END=66038007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:44:0,82,1397:0,82,255:39,0 chr1 66038009 . A . PASS END=66038009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1230:0,52,255:37,0 chr1 66038010 . T . PASS END=66038010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1412:0,118,255:40,0 chr1 66038011 . G . PASS END=66038012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:30:45:0,30,1209:0,30,255:40,0 chr1 66038013 . A . PASS END=66038013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:55:46:0,55,1439:0,55,255:40,0 chr1 66038014 . A . PASS END=66038015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,125,255:40,0 chr1 66038016 . C . LowGQ END=66038017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,8:50:0:50:0,0,1290:3,0,255:40,0 chr1 66038018 . G . PASS END=66038018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:99:60:0,99,1822:0,99,255:40,0 chr1 66038019 . G . PASS END=66038019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:47:61:0,47,1845:0,47,255:40,0 chr1 66038020 . A . PASS END=66038021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:67:0,120,1800:0,132,255:40,0 chr1 66038022 . C . PASS END=66038022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,8:68:49:68:0,49,2008:0,49,255:40,0 chr1 66038023 . A . PASS END=66038043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:83:85:0,83,1800:0,83,255:40,0 chr1 66038044 . G . PASS END=66038132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:70:0,120,1800:0,194,255:40,0 chr1 66058340 . G . PASS END=66058351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1199:0,86,255:37,0 chr1 66058352 . A . PASS END=66058352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:35,0 chr1 66058353 . G . PASS END=66058356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1257:0,97,255:38,0 chr1 66058357 . A . PASS END=66058357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1127:0,50,255:35,0 chr1 66058358 . T . PASS END=66058363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1297:0,97,255:38,0 chr1 66058364 . T . PASS END=66058364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr1 66058365 . C . PASS END=66058382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,103,1352:0,103,255:39,0 chr1 66058383 . A . PASS END=66058383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1310:0,70,255:35,0 chr1 66058384 . G . PASS END=66058480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:40:0,91,1490:0,91,255:40,0 chr1 66058481 . T . PASS END=66058481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:49:46:0,49,1241:0,49,255:40,0 chr1 66058482 . T . PASS END=66058543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:36:0,90,1336:0,91,255:40,0 chr1 66058544 . T . PASS END=66058544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1141:0,50,255:29,0 chr1 66058545 . A . PASS END=66058545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 66058546 . T . PASS END=66058546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:28,0 chr1 66058547 . G . PASS END=66058548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 66062123 . T . PASS END=66062123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr1 66062131 . T . PASS END=66062275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:39:0,84,1260:0,92,255:40,0 chr1 66062276 . A . PASS END=66062276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1312:0,70,255:27,0 chr1 66064343 . G . PASS END=66064343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 66064344 . C . PASS END=66064354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 66064355 . G . PASS END=66064359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr1 66064360 . A . PASS END=66064360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 66064361 . G . PASS END=66064487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:33:0,86,1213:0,86,255:40,0 chr1 66067075 . A . PASS END=66067328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:35:0,81,1219:0,81,255:40,0 chr1 66067329 . G . PASS END=66067329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:30,0 chr1 66067330 . A . PASS END=66067354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1242:0,86,255:33,0 chr1 66067355 . A . PASS END=66067355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1178:0,58,255:29,0 chr1 66067356 . T . PASS END=66067356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 66067357 . A . PASS END=66067357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1135:0,72,255:29,0 chr1 66067358 . T . PASS END=66067365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:31,0 chr1 66067526 . A . PASS END=66067643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,130,255:40,0 chr1 66070721 . G . PASS END=66070914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:87:37:0,87,1305:0,90,255:40,0 chr1 66070915 . C . PASS END=66070915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:33,0 chr1 66070916 . T . PASS END=66070920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:33,0 chr1 66074436 . T . PASS END=66074440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,104,1382:0,104,255:39,0 chr1 66074441 . C . PASS END=66074441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1396:0,73,255:38,0 chr1 66074442 . C . PASS END=66074584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:40:0,104,1449:0,104,255:40,0 chr1 66075630 . A . PASS END=66075789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:30:0,80,1083:0,80,255:40,0 chr1 66075897 . T . PASS END=66075914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:79:0,120,1800:0,221,255:40,0 chr1 66075915 . A . PASS END=66075951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:79:0,120,1800:0,191,255:40,0 chr1 66075952 . G C, 48.42 PASS DP=79;MQ=250.00;MQRankSum=7.570;ReadPosRankSum=5.421;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,34,0:0.430,0.000:79:18,19,0:27,15,0:47:83,0,50,1179,1552,2731:255,0,255:40,0:4.8416e+01,8.4389e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,20,12,22:20,25,19,15 chr1 66075953 . G . PASS END=66075979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,178,255:40,0 chr1 66081691 . C . PASS END=66081706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:35,0 chr1 66081707 . A . PASS END=66081707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:32,0 chr1 66081708 . C . PASS END=66081710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 66081711 . A . PASS END=66081711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1162:0,75,255:34,0 chr1 66081712 . T . PASS END=66081904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:36:0,81,1215:0,87,255:40,0 chr1 66081905 . A . PASS END=66081907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:24,0 chr1 66083647 . T . PASS END=66083829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:46:0,120,1800:0,128,255:40,0 chr1 66085611 . A . PASS END=66085611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 66085612 . T . PASS END=66085613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:35,0 chr1 66085614 . A . PASS END=66085706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:94:43:0,94,1580:0,94,255:40,0 chr1 66087036 . A . PASS END=66087142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:55:0,120,1800:0,149,255:40,0 chr1 66088589 . A . PASS END=66088663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,2:77:99:59:0,120,1800:0,177,255:40,0 chr1 66088664 . G . PASS END=66088664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 66091806 . A . PASS END=66091853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:50:0,120,1800:0,145,255:40,0 chr1 66098835 . A . PASS END=66098852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:84:0,120,1800:0,235,255:40,0 chr1 66101874 . C . PASS END=66101897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:32:0,88,1190:0,88,255:35,0 chr1 66101898 . A . PASS END=66101898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:34,0 chr1 66101899 . T . PASS END=66102219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:36:0,105,1575:0,108,255:40,0 chr1 66102220 . G . PASS END=66102256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,131,255:40,0 chr1 66102257 . G A, 49.81 PASS DP=50;MQ=250.00;MQRankSum=6.049;ReadPosRankSum=3.777;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,24,0:0.480,0.000:50:16,11,0:10,13,0:48:85,0,50,785,914,1699:255,0,255:22,0:4.9805e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,14,10,14:12,14,11,13 chr1 66102258 . T . PASS END=66102294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,105,1513:0,105,255:40,0 chr1 66102295 . A . PASS END=66102390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:35:0,83,1249:0,83,255:40,0 chr1 66102391 . A . PASS END=66102391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:35,0 chr1 66102392 . G . PASS END=66102698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:36:0,84,1272:0,84,255:40,0 chr1 66102746 . G . PASS END=66102746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,105,1575:0,158,255:34,0 chr1 66102797 . A . PASS END=66102797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 66102810 . T . PASS END=66102810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 66102851 . A . PASS END=66102851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 66102886 . A . PASS END=66102886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 66102899 . C . PASS END=66102899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,114,1710:0,119,255:38,0 chr1 66102949 . G . PASS END=66102949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 66102985 . G . PASS END=66102985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 66103101 . T . PASS END=66103101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 66103151 . C . PASS END=66103151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 66378998 . A . PASS END=66379043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:86:0,120,1800:0,225,255:40,0 chr1 66384280 . A . PASS END=66384494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1324:0,92,255:40,0 chr1 66384495 . T . PASS END=66384495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1073:0,74,255:27,0 chr1 66384496 . A . PASS END=66384500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:29,0 chr1 66384501 . A . PASS END=66384510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,76,255:24,0 chr1 66384511 . C . PASS END=66384518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:20:0,48,720:0,60,255:18,0 chr1 66419905 . A . PASS END=66419905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1341:0,95,255:33,0 chr1 66458590 . A . PASS END=66458790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,90,255:40,0 chr1 66458791 . C . PASS END=66458791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 66458792 . G . PASS END=66458792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 66458793 . G . PASS END=66458793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 66458794 . C . PASS END=66458798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 66458799 . T . PASS END=66458816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 66458817 . T . PASS END=66458817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:19,0 chr1 66458818 . C . PASS END=66458821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 66458822 . C . PASS END=66458823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 66458824 . T . PASS END=66458825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 66506382 . T . PASS END=66506391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:66:0,120,1800:0,185,255:40,0 chr1 66618211 . A . PASS END=66618215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,162,255:40,0 chr1 66713143 . C . PASS END=66713144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 66713145 . T . PASS END=66713145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,545:0,20,255:14,0 chr1 66713146 . T . PASS END=66713158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr1 66713159 . G . PASS END=66713163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 66713164 . T . PASS END=66713164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 66713165 . T . PASS END=66713177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,684:0,51,255:19,0 chr1 66713178 . G . PASS END=66713187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 66713188 . T . PASS END=66713188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 66713189 . C . PASS END=66713195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,860:0,69,255:23,0 chr1 66713196 . C G, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=3.504;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:4,7,0:6,6,0:48:85,0,49,457,358,815:255,0,255:10,0:5.0000e+01,6.9893e-05,5.2146e+01,4.5000e+02,3.9247e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,2,7,6:6,4,7,6 chr1 66713197 . C . PASS END=66713210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:25,0 chr1 66713211 . G . PASS END=66713211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 66713212 . G . PASS END=66713219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr1 66713220 . T . PASS END=66713228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,59,255:19,0 chr1 66713229 . C . PASS END=66713233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 66713234 . C . PASS END=66713239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:26,0 chr1 66713240 . C . PASS END=66713240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 66713241 . A . PASS END=66713242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 66713243 . A . PASS END=66713248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 66713249 . C . PASS END=66713249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 66713250 . G . PASS END=66713255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 66713256 . A . PASS END=66713256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:29,0 chr1 66713257 . G . PASS END=66713272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 66713273 . T . PASS END=66713313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 66713314 . A . PASS END=66713314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 66713315 . A . PASS END=66713316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 66713317 . C . PASS END=66713317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 66713318 . T . PASS END=66713319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 66713320 . T . PASS END=66713323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,707:0,49,255:19,0 chr1 66713324 . C . PASS END=66713325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 66713326 . T . PASS END=66713330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,836:0,53,255:19,0 chr1 66713331 . G . PASS END=66713334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 66713335 . G . PASS END=66713337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 66723129 . A . PASS END=66723187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,205,255:40,0 chr1 66723330 . A . PASS END=66723366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,116,1598:0,116,255:40,0 chr1 66723476 . G . PASS END=66723524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,95,255:40,0 chr1 66723525 . A . PASS END=66723543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,78,255:26,0 chr1 66723544 . C . PASS END=66723546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,72,255:18,0 chr1 66731721 . G . PASS END=66731789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:35:0,90,1350:0,105,255:40,0 chr1 66731790 . C . PASS END=66731793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 66731794 . C . PASS END=66731794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 66731795 . T . PASS END=66731811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,77,255:26,0 chr1 66797583 . A . PASS END=66797601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,115,1800:0,115,255:40,0 chr1 66798073 . A . PASS END=66798080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:18,0 chr1 66798081 . G . PASS END=66798081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 66798082 . C . PASS END=66798093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:19,0 chr1 66798094 . T . PASS END=66798098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 66798099 . T . PASS END=66798099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 66798100 . A . PASS END=66798117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 66798118 . G . PASS END=66798127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:28,0 chr1 66798128 . A . PASS END=66798132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr1 66798133 . G . PASS END=66798242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1134:0,80,255:34,0 chr1 66798243 . T . PASS END=66798243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 66798244 . T . PASS END=66798248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 66798249 . C . PASS END=66798255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:23,0 chr1 66798256 . G . PASS END=66798272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:19:0,44,675:0,44,255:19,0 chr1 66798273 . C . PASS END=66798289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr1 66798290 . T . PASS END=66798303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 66820530 . A . PASS END=66820577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:80:0,120,1800:0,199,255:40,0 chr1 66821210 . T . PASS END=66821303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:55:0,120,1800:0,127,255:40,0 chr1 66827298 . A . PASS END=66827298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:34,0 chr1 66827299 . C . PASS END=66827476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:38:0,85,1350:0,85,255:40,0 chr1 66828851 . G . PASS END=66828949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:99:49:0,120,1800:0,137,255:40,0 chr1 66829090 . G . PASS END=66829121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:57:0,120,1800:0,159,255:40,0 chr1 66829122 . A . PASS END=66829122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,7:65:64:65:0,64,1826:0,64,255:40,0 chr1 66829123 . T . PASS END=66829224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,151,255:40,0 chr1 66829225 . C . PASS END=66829254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,125,255:40,0 chr1 66831350 . G . PASS END=66831425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1260:0,87,255:40,0 chr1 66831426 . C . PASS END=66831428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 66831429 . A . PASS END=66831435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 66831436 . T . PASS END=66831436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:26,0 chr1 66831437 . C . PASS END=66831441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 66831442 . C . PASS END=66831443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 66831444 . A . PASS END=66831444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:25,0 chr1 66831445 . C . PASS END=66831449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:25,0 chr1 66833379 . A . PASS END=66833533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:33:0,83,1216:0,83,255:40,0 chr1 66833626 . G . PASS END=66833748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1200:0,83,255:40,0 chr1 66834470 . G . PASS END=66834479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,901:0,78,255:26,0 chr1 66834480 . A . PASS END=66834631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:30:0,81,1215:0,90,255:40,0 chr1 66834632 . G . PASS END=66834641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:24,0 chr1 66834642 . A . PASS END=66834642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr1 66834643 . A . PASS END=66834652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr1 66837996 . G . PASS END=66838006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 66838007 . C . PASS END=66838043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,709:0,60,255:26,0 chr1 66838044 . G . PASS END=66838079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1047:0,84,255:31,0 chr1 66838080 . A . PASS END=66838080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 66838081 . C . PASS END=66838106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:34,0 chr1 66838107 . C . PASS END=66838108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 66838109 . G . PASS END=66838152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1014:0,90,255:31,0 chr1 66838153 . A . PASS END=66838170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:27:0,74,1070:0,74,255:26,0 chr1 66838171 . T . PASS END=66838171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:25,0 chr1 66838172 . G . PASS END=66838174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 66838175 . G . PASS END=66838175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 66838176 . G . PASS END=66838181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,944:0,87,255:29,0 chr1 66838182 . T . PASS END=66838182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 66838183 . T . PASS END=66838193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:28,0 chr1 66838194 . C . PASS END=66838194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 66838195 . T . PASS END=66838203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 66838204 . A . PASS END=66838204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 66838205 . T . PASS END=66838209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 66838210 . A . PASS END=66838210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 66838211 . A . PASS END=66838228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1178:0,83,255:32,0 chr1 66838229 . G . PASS END=66838229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:30,0 chr1 66838230 . A . PASS END=66838355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1214:0,81,255:38,0 chr1 66838356 . A . PASS END=66838358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 66838359 . T . PASS END=66838360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 66838361 . A . PASS END=66838361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 67000042 . A . PASS END=67000051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,164,255:40,0 chr1 67091530 . G . PASS END=67091593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,189,255:40,0 chr1 67098753 . A . PASS END=67098777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:99:0,120,1800:0,255,255:40,0 chr1 67099763 . C . PASS END=67099767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,159,255:40,0 chr1 67099768 . G . PASS END=67099768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:79:55:0,79,1811:0,79,255:40,2 chr1 67099769 . A . PASS END=67099846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:88:54:0,88,1800:0,88,255:40,2 chr1 67101627 . C . PASS END=67101698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:39:0,87,1335:0,87,255:40,0 chr1 67105460 . A . PASS END=67105516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:83:0,120,1800:0,242,255:40,0 chr1 67108493 . A . PASS END=67108547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,173,255:40,0 chr1 67109227 . C . PASS END=67109297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:74:0,120,1800:0,201,255:40,2 chr1 67109298 . A . PASS END=67109334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:100:0,120,1800:0,241,255:40,0 chr1 67109335 . A G, 49.63 PASS DP=111;MQ=250.00;MQRankSum=9.050;ReadPosRankSum=-0.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:60,51,0:0.459,0.000:111:38,25,0:22,26,0:47:84,0,47,184,184,184:255,0,255:38,0:4.9634e+01,9.0602e-05,5.0000e+01,1.8440e+02,2.1917e+02,1.8741e+02:0.00,34.77,37.78,34.77,69.54,37.78:27,33,22,29:29,31,24,27 chr1 67109336 . G . PASS END=67109402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:82:0,120,1800:0,233,255:40,0 chr1 67126196 . A . PASS END=67126201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:68:0,120,1800:0,165,255:40,0 chr1 67126202 . A . PASS END=67126207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:67:0,120,1800:0,134,255:40,0 chr1 67133213 . A . PASS END=67133224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,105,1575:0,132,255:40,0 chr1 67136678 . G . PASS END=67136702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:116:0,120,1800:0,255,255:40,0 chr1 67137627 . G . PASS END=67137678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,127,255:40,0 chr1 67138964 . C . PASS END=67139049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:45:0,96,1570:0,96,255:40,0 chr1 67142687 . T . PASS END=67142689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,668:0,43,255:18,0 chr1 67142690 . T . PASS END=67142695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 67142696 . A . PASS END=67142696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 67142697 . T . PASS END=67142697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 67142698 . C . PASS END=67142698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 67142699 . A . PASS END=67142699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 67142700 . G . PASS END=67142730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:29:0,86,1035:0,86,255:36,0 chr1 67142731 . A . PASS END=67142731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr1 67142732 . A . PASS END=67142765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1241:0,89,255:36,0 chr1 67142766 . T . PASS END=67142766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 67142767 . T . PASS END=67142779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1255:0,89,255:32,0 chr1 67145361 . C . PASS END=67145361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr1 67145362 . A . PASS END=67145362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 67145363 . C . PASS END=67145401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,81,255:37,0 chr1 67145402 . C . PASS END=67145427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,63,255:26,0 chr1 67145428 . T . PASS END=67145428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 67145429 . G . PASS END=67145435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,862:0,72,255:24,0 chr1 67147552 . G . PASS END=67147561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 67147562 . G . PASS END=67147593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:28:0,80,1063:0,80,255:33,0 chr1 67147594 . C . PASS END=67147594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 67147595 . A . PASS END=67147768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1111:0,81,255:40,0 chr1 67147769 . T . PASS END=67147769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:32,0 chr1 67147770 . G . PASS END=67147801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1213:0,89,255:34,0 chr1 67147802 . A . PASS END=67147802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:27,0 chr1 67147803 . G . PASS END=67147804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1185:0,80,255:26,0 chr1 67147805 . T . PASS END=67147806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 67147807 . C . PASS END=67147810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 67147811 . A . PASS END=67147815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 67147816 . C . PASS END=67147986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1127:0,82,255:40,0 chr1 67147987 . C . PASS END=67147998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:25,0 chr1 67147999 . C . PASS END=67148052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,601:0,40,255:19,0 chr1 67149790 . A . PASS END=67149870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,112,1628:0,112,255:40,0 chr1 67154831 . G . PASS END=67154831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 67154832 . T . PASS END=67154832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 67154833 . G . PASS END=67154836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 67154837 . C . PASS END=67154837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 67154838 . A . PASS END=67154839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:21,0 chr1 67154840 . C . PASS END=67154840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 67154841 . C . PASS END=67154853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:26,0 chr1 67154854 . G . PASS END=67154857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 67154858 . C . PASS END=67154858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 67154859 . T . PASS END=67154859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 67154860 . C . PASS END=67154860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 67154861 . C . PASS END=67154861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 67154862 . T . PASS END=67154863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 67154864 . T . PASS END=67154897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1069:0,80,255:32,0 chr1 67154898 . T . PASS END=67154917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:26:0,67,938:0,67,255:25,0 chr1 67154918 . G . PASS END=67154918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:22,0 chr1 67154919 . G . PASS END=67154919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 67154920 . C . PASS END=67154920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr1 67154921 . C . PASS END=67154926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 67154927 . T . PASS END=67154927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:20,0 chr1 67154928 . A . PASS END=67154929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 67154930 . C . PASS END=67154930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,759:0,22,255:18,0 chr1 67154931 . T . PASS END=67154940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,762:0,50,255:19,0 chr1 67154941 . C . PASS END=67154941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 67154942 . C . PASS END=67154942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 67154943 . T . PASS END=67154945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 67154946 . A . PASS END=67154946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 67154947 . G . PASS END=67154953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,707:0,63,255:24,0 chr1 67154954 . A . PASS END=67154954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 67154955 . T . PASS END=67154956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 67154957 . T . PASS END=67154957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 67154958 . G . PASS END=67154958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 67155873 . T . PASS END=67156058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:39:0,100,1512:0,100,255:40,0 chr1 67160122 . T . PASS END=67160187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,105,1575:0,125,255:40,0 chr1 67161032 . A . PASS END=67161176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:64:0,120,1800:0,168,255:40,0 chr1 67184977 . G . PASS END=67184979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 67184980 . C . PASS END=67184988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 67184989 . G . PASS END=67184989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 67184990 . A . PASS END=67184996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr1 67184997 . C . PASS END=67185057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1226:0,87,255:40,0 chr1 67185058 . A . PASS END=67185058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1257:0,75,255:35,0 chr1 67185059 . T . PASS END=67185088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1153:0,89,255:37,0 chr1 67194947 . A . PASS END=67194948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 67194949 . G . PASS END=67194949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 67194950 . T . PASS END=67194961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1218:0,96,255:34,0 chr1 67194962 . T . PASS END=67194962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr1 67194963 . A . PASS END=67195085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1335:0,87,255:40,0 chr1 67195086 . C . PASS END=67195086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:28,0 chr1 67195087 . C . PASS END=67195102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr1 67199431 . T . PASS END=67199563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:57:0,120,1800:0,124,255:40,0 chr1 67205018 . G . PASS END=67205032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 67205033 . A . PASS END=67205045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:35,0 chr1 67205046 . C . PASS END=67205046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:35,0 chr1 67205047 . T . PASS END=67205220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1260:0,92,255:40,0 chr1 67206341 . G . PASS END=67206405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:71:0,120,1800:0,173,255:40,0 chr1 67206955 . G . PASS END=67206964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:29:0,82,1057:0,82,255:35,0 chr1 67206965 . T . PASS END=67206965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:34,0 chr1 67206966 . T . PASS END=67206986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1249:0,89,255:39,0 chr1 67206987 . T . PASS END=67207102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1189:0,81,255:40,0 chr1 67207103 . G . PASS END=67207104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:27,0 chr1 67207105 . A . PASS END=67207109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 67207110 . T . PASS END=67207110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:27,0 chr1 67207111 . T . PASS END=67207113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 67207114 . C . PASS END=67207119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:24,0 chr1 67208756 . G . PASS END=67208778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:96:0,120,1800:0,236,255:40,0 chr1 67220342 . A . PASS END=67220460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:46:0,114,1710:0,120,255:40,0 chr1 67221336 . A . PASS END=67221403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:61:0,120,1800:0,175,255:40,0 chr1 67236070 . T . PASS END=67236161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,120,1800:0,123,255:40,0 chr1 67236262 . C . PASS END=67236281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:79:0,120,1800:0,193,255:40,0 chr1 67241962 . G . PASS END=67242086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,112,1723:0,112,255:40,0 chr1 67242934 . G . PASS END=67242936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,962:0,78,255:26,0 chr1 67242937 . A . PASS END=67242940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 67242941 . A . PASS END=67242943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 67242944 . C . PASS END=67242954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 67242955 . G . PASS END=67242955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 67242956 . A . PASS END=67242963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 67242964 . A . PASS END=67242964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:28,0 chr1 67242965 . T . PASS END=67243118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1133:0,80,255:40,0 chr1 67243119 . T . PASS END=67243123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:29:0,72,1080:0,87,255:25,0 chr1 67243124 . T . PASS END=67243124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,759:0,53,255:22,0 chr1 67243125 . T . PASS END=67243131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,71,255:24,0 chr1 67243132 . G . PASS END=67243132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 67243133 . A . PASS END=67243137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 67263696 . T . PASS END=67263872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1215:0,89,255:40,0 chr1 67263873 . A . PASS END=67263873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 67263874 . T . PASS END=67263877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 67263878 . C . PASS END=67263878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 67263879 . C . PASS END=67263886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr1 67263887 . A . PASS END=67263896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,824:0,64,255:26,0 chr1 67263897 . A . PASS END=67263897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr1 67263898 . T . PASS END=67263900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 67263901 . G . PASS END=67263901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 67263902 . G . PASS END=67263923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 67263924 . C . PASS END=67263928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 67266730 . C . PASS END=67266755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1013:0,81,255:39,0 chr1 67266756 . T A, 164.38 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,24,0:0,15,0:114:202,117,0,1504,117,1504:255,117,0:0,0:1.6438e+02,1.1438e+02,0.0000e+00,4.5000e+02,1.4915e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,12:0,0,24,15 chr1 67266757 . G . PASS END=67266772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:39:0,101,1419:0,101,255:40,0 chr1 67266773 . G . PASS END=67266773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1451:0,79,255:40,0 chr1 67266774 . G . PASS END=67266793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,113,1574:0,113,255:40,0 chr1 67266794 . G . PASS END=67266904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:34:0,84,1195:0,91,255:40,0 chr1 67279813 . T . PASS END=67279816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,230,255:40,0 chr1 67279817 . G . PASS END=67279863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:73:0,120,1800:0,197,255:40,0 chr1 67288044 . C . PASS END=67288046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 67288047 . G . PASS END=67288191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1080:0,87,255:40,0 chr1 67288192 . G . PASS END=67288200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1035:0,88,255:25,0 chr1 67292503 . G . PASS END=67292520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1039:0,81,255:39,0 chr1 67292521 . C . PASS END=67292692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:39:0,112,1466:0,112,255:40,0 chr1 67292693 . G . PASS END=67292722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:44:0,84,1260:0,121,255:40,0 chr1 67292723 . C . PASS END=67292729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:35:0,72,1080:0,94,255:26,0 chr1 67293495 . C . PASS END=67293593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:56:0,120,1800:0,168,255:40,0 chr1 67299268 . C . PASS END=67299317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:73:0,120,1800:0,184,255:40,0 chr1 67299318 . C . PASS END=67299318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,17:108:18:108:0,18,2560:0,18,255:40,0 chr1 67299319 . T . PASS END=67299389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:83:0,120,1800:0,155,255:40,0 chr1 67299674 . C . PASS END=67299796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:47:0,120,1800:0,125,255:40,0 chr1 67299797 . G . PASS END=67299828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,84,255:38,0 chr1 67299829 . T . PASS END=67299831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 67301309 . C . PASS END=67301314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1266:0,81,255:40,0 chr1 67301315 . T . PASS END=67301315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1396:0,79,255:40,0 chr1 67301316 . C . PASS END=67301460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:41:0,113,1582:0,113,255:40,0 chr1 67303336 . T . PASS END=67303340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 67303341 . A . PASS END=67303479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,146,255:40,0 chr1 67306152 . T . PASS END=67306158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr1 67306159 . G . PASS END=67306354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:88:32:0,88,1164:0,88,255:40,2 chr1 67313167 . C . PASS END=67313211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,167,255:40,0 chr1 67313212 . A . PASS END=67313248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:93:0,120,1800:0,218,255:40,0 chr1 67313249 . G A, 50.00 PASS DP=98;MQ=250.00;MQRankSum=8.510;ReadPosRankSum=5.777;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,52,0:0.531,0.000:98:23,29,0:23,23,0:48:85,0,50,1835,1608,3444:255,0,255:40,0:5.0000e+01,6.7045e-05,5.2651e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,26,26,26:23,23,29,23 chr1 67313250 . T . PASS END=67313286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,2:99:99:96:0,120,1800:0,253,255:40,0 chr1 67313287 . A . PASS END=67313361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:54:0,120,1800:0,135,255:40,0 chr1 67313924 . T . PASS END=67313928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 67313929 . G . PASS END=67313929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 67313930 . A . PASS END=67313940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr1 67313941 . G . PASS END=67313941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr1 67313942 . A . PASS END=67313994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr1 67327830 . T . PASS END=67327979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:35:0,81,1215:0,90,255:40,0 chr1 67327980 . T . PASS END=67327983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:34:0,78,1170:0,102,255:26,0 chr1 67327984 . G . PASS END=67327986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 67337030 . T . PASS END=67337192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:59:0,120,1800:0,150,255:40,0 chr1 67340464 . G . PASS END=67340550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:50:0,120,1800:0,134,255:40,0 chr1 67340551 . A . LowGQ END=67340551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,14:75:0:75:0,0,1462:37,0,255:40,0 chr1 67340552 . T . PASS END=67340620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:50:0,117,1723:0,117,255:40,0 chr1 67356760 . T . PASS END=67356949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:53:0,120,1800:0,124,255:40,0 chr1 67358912 . C . PASS END=67359096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:40:0,99,1346:0,104,255:40,0 chr1 67370863 . T . PASS END=67371056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:31:0,81,1215:0,93,255:40,0 chr1 67371057 . T . PASS END=67371057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 67371058 . C . PASS END=67371058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 67384790 . T . PASS END=67384799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr1 67390345 . A . PASS END=67390378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,992:0,81,255:36,0 chr1 67390379 . G . PASS END=67390415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:34:0,91,1256:0,91,255:35,0 chr1 67390416 . G C, 151.88 PASS DP=35;MQ=249.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,18,0:0,17,0:102:190,105,0,1312,105,1312:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,15,20 chr1 67390417 . C . PASS END=67390429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:33,0 chr1 67390430 . T . PASS END=67390430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1140:0,60,255:31,0 chr1 67390431 . T . PASS END=67390452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1208:0,83,255:32,0 chr1 67390453 . T . PASS END=67390463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:29:0,69,1000:0,70,255:25,0 chr1 67390464 . T . PASS END=67390464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:21,0 chr1 67390465 . C . PASS END=67390467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 67390468 . C G, 121.30 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,15,0:0,10,0:71:159,74,0,259,259,259:255,75,0:0,0:1.2130e+02,7.1300e+01,2.5886e-07,2.5607e+02,2.9084e+02,2.5908e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,12,13:0,0,10,15 chr1 67390469 . C . PASS END=67390478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:22,0 chr1 67390479 . T . PASS END=67390499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:17:0,41,665:0,41,255:19,0 chr1 67390500 . T . PASS END=67390500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:13,0 chr1 67390501 . T . PASS END=67390505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 67390506 . G . PASS END=67390514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 67390712 . A . PASS END=67390777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1133:0,80,255:33,0 chr1 67390778 . T . PASS END=67390778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 67391825 . A . PASS END=67391925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,105,1427:0,110,255:40,0 chr1 67394573 . A . PASS END=67394646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:74:0,120,1800:0,196,255:40,0 chr1 67396075 . A . PASS END=67396083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:40,0 chr1 67405711 . C . PASS END=67405735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:84:0,120,1800:0,212,255:40,0 chr1 67405869 . A . PASS END=67405903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:59:0,115,1800:0,115,255:40,0 chr1 67405904 . A . PASS END=67405905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,114,1710:0,174,255:39,0 chr1 67411833 . G . PASS END=67411993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:52:0,120,1800:0,138,255:40,0 chr1 67423742 . G . PASS END=67423742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1272:0,102,255:34,0 chr1 67423743 . A . PASS END=67423743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:33,0 chr1 67423744 . A . PASS END=67423903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:86:34:0,86,1217:0,86,255:40,0 chr1 67424534 . G . PASS END=67424666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:37:0,84,1305:0,84,255:40,0 chr1 67425362 . A . PASS END=67425426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:74:0,120,1800:0,186,255:40,0 chr1 67428771 . G . PASS END=67428843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:68:0,120,1800:0,187,255:40,2 chr1 67436491 . T . PASS END=67436642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,104,1496:0,104,255:40,0 chr1 67437338 . G . PASS END=67437419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,172,255:40,0 chr1 67438580 . A . PASS END=67438674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:57:0,120,1800:0,155,255:40,0 chr1 67442278 . G . PASS END=67442405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,117,1755:0,126,255:40,0 chr1 67447462 . G . PASS END=67447595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:34:0,88,1213:0,88,255:40,0 chr1 67447596 . A . PASS END=67447596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:30,0 chr1 67447597 . A . PASS END=67447601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 67450255 . G . PASS END=67450571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:37:0,81,1316:0,81,255:40,0 chr1 67450572 . A . PASS END=67450572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:34,0 chr1 67450573 . C . PASS END=67450573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 67450574 . A . PASS END=67450574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:47:36:0,47,1234:0,47,255:33,0 chr1 67450575 . G . PASS END=67450583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1189:0,88,255:33,0 chr1 67452086 . G . PASS END=67452156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,146,255:40,0 chr1 67470023 . T . PASS END=67470131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,120,1800:0,141,255:40,0 chr1 67474768 . C . PASS END=67474850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:71:0,120,1800:0,189,255:40,0 chr1 67486052 . C . PASS END=67486130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,110,1586:0,110,255:40,1 chr1 67487218 . C . PASS END=67487285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:33:0,93,1271:0,99,255:40,0 chr1 67497707 . C . PASS END=67497710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1131:0,90,255:30,0 chr1 67497711 . T . PASS END=67497711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1048:0,54,255:28,0 chr1 67497712 . C . PASS END=67497787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:31:0,87,1305:0,93,255:40,0 chr1 67507919 . C . PASS END=67508011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:39:0,90,1305:0,90,255:40,0 chr1 67512947 . C . PASS END=67512957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,128,255:40,0 chr1 67512958 . A . PASS END=67513050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,120,1800:0,124,255:40,0 chr1 67515465 . C . PASS END=67515533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:69:0,120,1800:0,191,255:40,0 chr1 67516116 . T . PASS END=67516187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,101,1320:0,101,255:40,0 chr1 67517692 . T . PASS END=67517692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 67517695 . T . PASS END=67517762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,143,255:40,0 chr1 67518454 . C . PASS END=67518461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,862:0,64,255:26,0 chr1 67518462 . G . PASS END=67518466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:28,0 chr1 67518467 . T . PASS END=67518468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:27,0 chr1 67518469 . T . PASS END=67518473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 67518474 . C . PASS END=67518493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,65,255:26,0 chr1 67518494 . A . PASS END=67518500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:28,0 chr1 67518501 . G . PASS END=67518501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 67518502 . C . PASS END=67518502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 67518503 . G . PASS END=67518513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr1 67518514 . C . PASS END=67518540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1063:0,84,255:32,0 chr1 67518639 . C . PASS END=67518672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,152,255:40,0 chr1 67519494 . C . PASS END=67519501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 67519502 . G . PASS END=67519502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 67519503 . G . PASS END=67519511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 67519512 . C . PASS END=67519528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr1 67519529 . G . PASS END=67519561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:14:0,40,543:0,40,255:18,0 chr1 67519562 . G . PASS END=67519562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 67519563 . G . PASS END=67519605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,615:0,51,255:18,0 chr1 67519606 . T . PASS END=67519606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 67519607 . C . PASS END=67519611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 67519612 . G . PASS END=67519612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 67519613 . C . PASS END=67519623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:16,0 chr1 67519624 . C . PASS END=67519624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 67519625 . T . PASS END=67519625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 67519626 . C . PASS END=67519629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 67519630 . G . PASS END=67519630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 67519631 . T . PASS END=67519672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,48,255:18,0 chr1 67519673 . C . PASS END=67519696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 67558688 . T . PASS END=67558701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,137,255:40,0 chr1 67558702 . A . PASS END=67558738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,123,255:40,0 chr1 67558739 . C T, 45.56 PASS DP=57;MQ=250.00;MQRankSum=6.303;ReadPosRankSum=3.221;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,22,0:0.386,0.000:57:17,12,0:18,10,0:45:80,0,50,785,1199,1984:255,0,255:33,0:4.5556e+01,1.4263e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,18,15,7:21,14,15,7 chr1 67558740 . G . PASS END=67558776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,141,255:40,0 chr1 67558777 . T . PASS END=67559287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:88:40:0,88,1397:0,88,255:40,1 chr1 67560918 . C . PASS END=67560955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,99,1512:0,99,255:40,0 chr1 67560956 . C T, 50.00 PASS DP=65;MQ=250.00;MQRankSum=6.735;ReadPosRankSum=2.919;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,40,0:0.615,0.000:65:11,21,0:14,19,0:46:85,0,46,1365,886,2251:255,0,255:25,0:5.0000e+01,1.0432e-04,4.8536e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,4,32,8:11,14,23,17 chr1 67560957 . T . PASS END=67560993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:65:0,120,1800:0,195,255:40,0 chr1 67560994 . C . PASS END=67561104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:79:0,120,1800:0,194,255:40,0 chr1 67561935 . C . PASS END=67562004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:73:0,120,1800:0,195,255:40,0 chr1 67568921 . C . PASS END=67569065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:38:0,96,1440:0,114,255:40,0 chr1 67577260 . C . PASS END=67577327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:91:0,120,1800:0,255,255:40,0 chr1 67579429 . T . PASS END=67579439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,122,255:40,0 chr1 67581035 . C . PASS END=67581147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,111,1665:0,139,255:40,0 chr1 67591435 . A . PASS END=67591443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr1 67591444 . T . PASS END=67591445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:67:28:0,67,917:0,67,255:32,0 chr1 67591446 . T . PASS END=67591562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1170:0,86,255:40,0 chr1 67591563 . T . PASS END=67591567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,101,255:31,0 chr1 67591568 . T . PASS END=67591569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 67591570 . C . PASS END=67591574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,101,255:27,0 chr1 67591575 . A . PASS END=67591583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:60:32:0,60,900:0,66,255:26,0 chr1 67591584 . C . PASS END=67591592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:49:31:0,49,765:0,49,255:18,0 chr1 67592849 . C . PASS END=67592923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,186,255:40,0 chr1 67633804 . A . PASS END=67633873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:57:0,120,1800:0,163,255:40,0 chr1 67635025 . G . PASS END=67635032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 67635033 . A . PASS END=67635039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:24,0 chr1 67635040 . A . PASS END=67635040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr1 67635041 . C . PASS END=67635043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:67:24:0,67,922:0,67,255:27,0 chr1 67635044 . C . PASS END=67635270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:28:0,84,1033:0,84,255:40,0 chr1 67635271 . C . PASS END=67635271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:33,0 chr1 67635272 . C . PASS END=67635309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:30:0,88,1058:0,88,255:35,0 chr1 67635310 . T . PASS END=67635310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 67635311 . T . PASS END=67635311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 67635312 . T . PASS END=67635312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,910:0,51,255:27,0 chr1 67635313 . C . PASS END=67635315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 67635316 . C . PASS END=67635321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:24,0 chr1 67648519 . A . PASS END=67648642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:37:0,96,1436:0,111,255:40,0 chr1 67666420 . T . PASS END=67666423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 67666424 . G . PASS END=67666424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:27,0 chr1 67666425 . A . PASS END=67666445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1123:0,80,255:40,0 chr1 67666446 . A . PASS END=67666580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,108,1620:0,123,255:40,0 chr1 67672593 . T . PASS END=67672593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 67672594 . G . PASS END=67672595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:42:30:0,42,889:0,42,255:28,0 chr1 67672596 . T . PASS END=67672596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 67672597 . A . PASS END=67672597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:33,0 chr1 67672598 . C . PASS END=67672598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1221:0,91,255:35,0 chr1 67672599 . C . PASS END=67672599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1227:0,67,255:36,0 chr1 67672600 . T . PASS END=67672605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1230:0,84,255:38,0 chr1 67672606 . A . PASS END=67672606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1192:0,51,255:34,0 chr1 67672607 . G . PASS END=67672607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1243:0,70,255:36,0 chr1 67672608 . C . PASS END=67672615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1413:0,84,255:40,0 chr1 67672616 . T . PASS END=67672738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:97:45:0,97,1554:0,97,255:40,0 chr1 67685257 . G . PASS END=67685349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:41:0,90,1422:0,90,255:40,0 chr1 67685350 . G . PASS END=67685386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,133,255:40,0 chr1 67685387 . T C, 47.83 PASS DP=60;MQ=250.00;MQRankSum=6.552;ReadPosRankSum=4.588;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,25,0:0.417,0.000:60:17,12,0:18,13,0:46:83,0,47,183,183,183:255,0,255:35,0:4.7827e+01,1.1494e-04,5.0000e+01,1.8260e+02,2.1737e+02,1.8561e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,9,14,11:14,21,9,16 chr1 67685388 . G . PASS END=67685413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,148,255:40,0 chr1 67685443 . G A, 47.29 PASS DP=59;MQ=250.00;MQRankSum=6.433;ReadPosRankSum=3.087;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,24,0:0.414,0.000:58:17,11,0:17,13,0:46:82,0,50,821,1208,2029:255,0,255:31,0:4.7285e+01,1.0277e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,15,12,12:16,18,15,9 chr1 67702396 . T . PASS END=67702485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:48:0,120,1800:0,128,255:40,0 chr1 67705862 . A . PASS END=67705964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:69:0,120,1800:0,207,255:40,0 chr1 67721520 . G . PASS END=67721610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:72:0,120,1800:0,195,255:40,0 chr1 67724161 . G . PASS END=67724168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,887:0,75,255:26,0 chr1 67724169 . T . PASS END=67724177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr1 67724178 . G . PASS END=67724178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 67724179 . A . PASS END=67724809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:80:30:0,80,1088:0,80,255:40,0 chr1 67724810 . A . PASS END=67724811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:45:0,78,1170:0,118,255:26,0 chr1 67786052 . A . PASS END=67786127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:71:0,120,1800:0,183,255:40,0 chr1 67787285 . A . PASS END=67787543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:30:0,80,1139:0,80,255:40,0 chr1 67787544 . A . PASS END=67787544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 67787545 . A . PASS END=67787545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 67787546 . T . PASS END=67787546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 67787547 . A . PASS END=67787549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1148:0,83,255:28,0 chr1 67787550 . T . PASS END=67787565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,924:0,70,255:26,0 chr1 67787566 . G . PASS END=67787566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:21,0 chr1 67787567 . T . PASS END=67787572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,74,255:22,0 chr1 67792418 . T . PASS END=67792520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:42:0,84,1260:0,126,255:40,0 chr1 67792521 . G . PASS END=67792522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 67792523 . A . PASS END=67792532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:42:26:0,42,630:0,78,255:18,0 chr1 67793883 . G . PASS END=67794050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:34:0,86,1178:0,86,255:40,0 chr1 67794051 . C . PASS END=67794064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:28:0,60,900:0,84,255:26,0 chr1 67794065 . T . PASS END=67794065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,937:0,29,255:18,0 chr1 67794066 . A . PASS END=67794067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:20,0 chr1 67795270 . T . PASS END=67795281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,112,1784:0,112,255:40,0 chr1 67795282 . C . PASS END=67795318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,133,255:40,0 chr1 67795319 . T C, 230.12 PASS DP=61;MQ=249.97;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,31,0:0,30,0:180:268,183,0,2328,183,2328:255,186,0:0,0:2.3012e+02,1.8012e+02,0.0000e+00,4.5000e+02,2.1489e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,44,17:0,0,28,33 chr1 67795320 . G . PASS END=67795356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,137,255:40,0 chr1 67795357 . T . PASS END=67795412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:95:45:0,95,1620:0,95,255:40,0 chr1 67796343 . G . PASS END=67796345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 67796346 . A . PASS END=67796346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:77:49:0,77,1601:0,77,255:40,0 chr1 67796347 . A . PASS END=67796493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:96:49:0,96,1440:0,134,255:40,0 chr1 67804307 . A . PASS END=67804443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:41:0,107,1466:0,107,255:40,0 chr1 67816553 . A . PASS END=67816572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1180:0,84,255:31,0 chr1 67816573 . A . PASS END=67816573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 67816574 . A . PASS END=67816575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 67816576 . A . PASS END=67816577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 67816578 . G . PASS END=67816758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1150:0,80,255:40,0 chr1 67816759 . C . PASS END=67816772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,784:0,63,255:21,0 chr1 67833508 . G . PASS END=67833516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,670:0,54,255:19,0 chr1 67833517 . C . PASS END=67833517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 67833518 . T . PASS END=67833518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 67833519 . C . PASS END=67833546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,947:0,68,255:26,0 chr1 67833547 . G . PASS END=67833666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1024:0,81,255:40,0 chr1 67833667 . G . PASS END=67833688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:26,0 chr1 67833689 . T . PASS END=67833708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 67837864 . A . PASS END=67837901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:93:0,120,1800:0,245,255:40,0 chr1 67838119 . A . PASS END=67838217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:41:0,90,1483:0,90,255:40,0 chr1 67838308 . C . PASS END=67838461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:39:0,90,1350:0,101,255:40,0 chr1 67838462 . C . PASS END=67838466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:37:0,75,1125:0,95,255:26,0 chr1 67845669 . A . PASS END=67845689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1033:0,84,255:34,0 chr1 67845690 . A . PASS END=67845690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:33,0 chr1 67845691 . A . PASS END=67845693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1296:0,105,255:35,0 chr1 67845694 . T . PASS END=67845694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:34,0 chr1 67845695 . T . PASS END=67845799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:28:0,82,1035:0,82,255:40,0 chr1 67845800 . C . PASS END=67845800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 67845801 . T . PASS END=67845801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 67845802 . G . PASS END=67845802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 67845803 . C . PASS END=67845804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 67845805 . A . PASS END=67845806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 67852262 . G . PASS END=67852297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,153,255:40,0 chr1 67852298 . T . PASS END=67852334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,110,1800:0,110,255:40,0 chr1 67852335 . G A, 48.00 PASS DP=50;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=4.894;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,21,0:0.420,0.000:50:12,9,0:17,12,0:47:83,0,50,727,956,1683:255,0,255:25,0:4.8003e+01,9.0602e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,16,5,16:18,11,15,6 chr1 67852336 . C . PASS END=67852352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,130,255:40,0 chr1 67855712 . G . PASS END=67855868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:46:0,120,1800:0,138,255:40,0 chr1 67861230 . G . PASS END=67861240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 67861241 . G . PASS END=67861241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 67861242 . C . PASS END=67861244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 67861245 . C . PASS END=67861249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 67861250 . G . PASS END=67861250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 67861251 . G . PASS END=67861259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,784:0,66,255:26,0 chr1 67861260 . C . PASS END=67861273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:30,0 chr1 67861274 . C . PASS END=67861275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 67861276 . C . PASS END=67861280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 67861281 . G . PASS END=67861281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr1 67861282 . A . PASS END=67861356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1119:0,85,255:35,0 chr1 67861357 . A . PASS END=67861357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1009:0,52,255:28,0 chr1 67861358 . C . PASS END=67861359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 67861360 . G . PASS END=67861360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 67861361 . G . PASS END=67861367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 67861368 . A . PASS END=67861368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,861:0,73,255:29,0 chr1 67861369 . G . PASS END=67861371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 67861372 . A . PASS END=67861372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 67861373 . A . PASS END=67861389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1060:0,90,255:31,0 chr1 67861390 . A . PASS END=67861390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:29,0 chr1 67861391 . T . PASS END=67861399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:29,0 chr1 67861400 . T . PASS END=67861435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:26,0 chr1 67861436 . A . PASS END=67861453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,58,255:19,0 chr1 67861454 . A . PASS END=67861471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr1 67861472 . G . PASS END=67861472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 67861473 . G . PASS END=67861482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 67861483 . A . PASS END=67861484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 67861485 . A . PASS END=67861485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 67861486 . A . PASS END=67861495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 67861496 . G . PASS END=67861501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 67861502 . G . PASS END=67861502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:25,0 chr1 67861503 . G . PASS END=67861512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 67861513 . C . PASS END=67861513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 67861514 . A . PASS END=67861516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 67861517 . G . PASS END=67861519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 67861520 . C A, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=3.761;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:4,6,0:9,8,0:48:85,0,50,501,378,879:255,0,255:13,0:5.0000e+01,6.6010e-05,5.2820e+01,4.5000e+02,4.1323e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,9,5:9,4,7,7 chr1 67861521 . G . PASS END=67861529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 67861530 . G . PASS END=67861532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 67861533 . T . PASS END=67861533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 67861534 . G . PASS END=67861557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1247:0,86,255:33,0 chr1 67861558 . G . PASS END=67861653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:33:0,80,1205:0,80,255:39,0 chr1 67861654 . C . PASS END=67861654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 67861655 . T . PASS END=67861669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:37:0,84,1426:0,84,255:37,0 chr1 67861670 . T . PASS END=67861670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1198:0,61,255:30,0 chr1 67861671 . T . PASS END=67861729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:35:0,80,1200:0,80,255:38,0 chr1 67861730 . T . PASS END=67861730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:32,0 chr1 67861731 . C . PASS END=67861741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:32,0 chr1 67861742 . A . PASS END=67861742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:27,0 chr1 67861743 . A . PASS END=67861749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:28,0 chr1 67861750 . G . PASS END=67861763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:26,0 chr1 67861764 . A . PASS END=67861772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:50:22:0,50,765:0,50,255:19,0 chr1 67878890 . T . PASS END=67878892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:33,0 chr1 67878893 . A . PASS END=67878893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1193:0,64,255:33,0 chr1 67878894 . G . PASS END=67878946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:34:0,85,1156:0,85,255:40,0 chr1 67880849 . C . PASS END=67880852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 67880853 . T . PASS END=67880853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 67880854 . C . PASS END=67880855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 67880856 . G . PASS END=67880856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 67880857 . T . PASS END=67880869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:7,0 chr1 67880870 . G . PASS END=67880873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 67880874 . G . PASS END=67880874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 67880875 . G . PASS END=67880876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 67880877 . C . PASS END=67880877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 67880878 . G . PASS END=67880880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 67880881 . C . PASS END=67880884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 67880885 . A . PASS END=67880886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 67880887 . G . PASS END=67880893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 67880894 . T . PASS END=67880894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 67880895 . C . PASS END=67880895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 67880896 . C . PASS END=67880896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 67880897 . A . PASS END=67880900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 67880901 . C . PASS END=67880901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 67880902 . G . PASS END=67880911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 67880912 . G . PASS END=67880913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 67880914 . C . PASS END=67880924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 67880925 . G . PASS END=67880925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:11,0 chr1 67880926 . G . PASS END=67880934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 67880935 . G . PASS END=67880935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 67880936 . G . PASS END=67880948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 67880949 . A . PASS END=67880951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 67880952 . T . PASS END=67880952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 67880953 . C . PASS END=67880953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 67880954 . C . PASS END=67880964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 67880965 . T . PASS END=67880965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 67880966 . T . PASS END=67880989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 67880990 . A . PASS END=67880993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 67880994 . T . PASS END=67881006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,380:0,30,255:10,0 chr1 67881007 . A . PASS END=67881022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 67885692 . C . PASS END=67885869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:90:38:0,90,1341:0,90,255:40,0 chr1 67889883 . T . PASS END=67889888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 67889889 . T . PASS END=67889892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 67889893 . T . PASS END=67889908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr1 67889909 . A . PASS END=67889921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:23,0 chr1 67889922 . T . PASS END=67889922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 67889923 . C . PASS END=67889948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:24,0 chr1 67889949 . T . PASS END=67889949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 67889950 . G . PASS END=67889950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 67889951 . A . PASS END=67889951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 67889952 . T . PASS END=67889967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 67889968 . T . PASS END=67889968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 67889969 . A . PASS END=67889988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 67889989 . T . PASS END=67890005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 67890571 . G . PASS END=67890660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,102,1303:0,102,255:40,0 chr1 67890766 . G . PASS END=67890800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1095:0,82,255:31,0 chr1 67890801 . T . PASS END=67890801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,866:0,56,255:28,0 chr1 67890802 . T . PASS END=67890811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:30,0 chr1 67890812 . A . PASS END=67890812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,935:0,59,255:29,0 chr1 67890813 . A . PASS END=67890814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 67890815 . C . PASS END=67890815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 67890816 . A . PASS END=67890816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 67890817 . A . PASS END=67890817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr1 67890818 . A . PASS END=67890826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:31,0 chr1 67890827 . C . PASS END=67890827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 67890828 . T . PASS END=67890829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 67890830 . G . PASS END=67890830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1037:0,60,255:27,0 chr1 67890831 . G . PASS END=67890842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 67890843 . T . PASS END=67890843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr1 67890844 . C . PASS END=67890848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 67890849 . G . PASS END=67890863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:24,0 chr1 67890864 . T . PASS END=67890887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,621:0,40,255:19,0 chr1 67890888 . A . PASS END=67890889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 67890890 . G . PASS END=67890891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 67890892 . C . PASS END=67890899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:34:17:0,34,507:0,34,255:13,0 chr1 67890900 . A . PASS END=67890900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:12,0 chr1 67890901 . A . PASS END=67890902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 67890903 . C . PASS END=67890903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 67890904 . G . PASS END=67890906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 67891818 . C . PASS END=67891968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:41:0,93,1383:0,93,255:40,0 chr1 67895671 . C . PASS END=67895683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 67895684 . C . PASS END=67895687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 67895688 . A . PASS END=67895701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 67895702 . C . PASS END=67895709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 67895710 . T . PASS END=67895710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 67895711 . C . PASS END=67895717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 67895718 . A . PASS END=67895718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 67895719 . C . PASS END=67895729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr1 67895730 . C . PASS END=67895737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 67895738 . C . PASS END=67895738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 67895739 . A . PASS END=67895750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 67895751 . C . LowGQ END=67895751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,227:12,0,239:8,0 chr1 67895752 . G . PASS END=67895752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 67895753 . G . PASS END=67895760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 67895761 . G . PASS END=67895761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 67895762 . G . PASS END=67895775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 67895776 . G . PASS END=67895778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 67895779 . G . PASS END=67895779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 67895780 . T . PASS END=67895781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 67895782 . T . PASS END=67895782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 67895783 . G . PASS END=67895786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 67895787 . G . PASS END=67895787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 67895788 . C . PASS END=67895789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 67895790 . G . PASS END=67895790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 67895791 . C . PASS END=67895793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 67895794 . T . PASS END=67895795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 67895796 . G . PASS END=67895802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 67895803 . T . PASS END=67895803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 67895804 . C . PASS END=67895804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 67895805 . T . PASS END=67895807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 67895808 . G . PASS END=67895808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 67895809 . C . PASS END=67895840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 67895841 . C . PASS END=67895841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 67895842 . C . PASS END=67895861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 67895862 . G . PASS END=67895862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 67895863 . C . PASS END=67895863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 67895864 . T . PASS END=67895864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 67895865 . T . PASS END=67895879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 67895880 . T . PASS END=67895880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:10,0 chr1 67895881 . C . PASS END=67895884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 67895885 . T . PASS END=67895886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,449:0,23,255:12,0 chr1 67895887 . C . PASS END=67895887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 67895888 . C . PASS END=67895890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 67895891 . C . PASS END=67895914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 67895915 . G . PASS END=67895915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 67895916 . T . PASS END=67895918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 67895919 . T . PASS END=67895919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:8,0 chr1 67895920 . C . PASS END=67895923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 67895924 . T . PASS END=67895925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 67895926 . A . PASS END=67895935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 67895936 . T . PASS END=67895936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:7,0 chr1 67895937 . C . PASS END=67895950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 67895951 . G . PASS END=67895983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 68151178 . A . PASS END=68151178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 68151179 . T . PASS END=68151192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,801:0,72,255:24,0 chr1 68151193 . T . PASS END=68151193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 68151194 . T . PASS END=68151206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,692:0,71,255:26,0 chr1 68151207 . G . PASS END=68151218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:27,0 chr1 68151219 . A . PASS END=68151221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 68151708 . G . PASS END=68151749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1141:0,80,255:34,0 chr1 68151750 . A . PASS END=68151750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:30,0 chr1 68151751 . G . PASS END=68151777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1154:0,83,255:34,0 chr1 68151778 . G . PASS END=68151782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:31:0,75,1125:0,93,255:26,0 chr1 68151783 . G . PASS END=68151786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 68151787 . G . PASS END=68151805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 68151806 . A . PASS END=68151809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:18,0 chr1 68152033 . C . PASS END=68152036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 68152037 . C . PASS END=68152043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,394:0,33,255:12,0 chr1 68152044 . A . PASS END=68152046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 68152047 . T . PASS END=68152048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 68152049 . G . PASS END=68152067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 68152068 . C . PASS END=68152068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 68152069 . G . PASS END=68152104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 68152105 . C . PASS END=68152129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr1 68152130 . T . PASS END=68152130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 68152131 . G . PASS END=68152138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr1 68152139 . A . PASS END=68152139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr1 68152140 . A . PASS END=68152151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:22,0 chr1 68152152 . T . PASS END=68152152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 68152153 . C . PASS END=68152166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 68152167 . A . PASS END=68152167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:22,0 chr1 68152168 . C . PASS END=68152171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 68152172 . G . PASS END=68152172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 68152173 . G . PASS END=68152179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 68152180 . G . PASS END=68152180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 68152181 . G . PASS END=68152191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 68152192 . G . PASS END=68152192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 68152193 . C . PASS END=68152216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:23,0 chr1 68152217 . G . PASS END=68152217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 68152218 . C . PASS END=68152219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 68152220 . G . PASS END=68152220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 68152221 . C . PASS END=68152235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 68152236 . A . PASS END=68152245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 68152246 . G . PASS END=68152246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 68152247 . G . PASS END=68152260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 68152261 . G . PASS END=68152261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 68152262 . C . PASS END=68152262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 68152263 . T . PASS END=68152263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 68152264 . G . PASS END=68152270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 68153344 . A . PASS END=68153344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 68153345 . A . PASS END=68153457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:33:0,89,1094:0,89,255:40,0 chr1 68171134 . C . PASS END=68171237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,84,255:40,0 chr1 68171238 . G . PASS END=68171257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 68171258 . A . PASS END=68171258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 68171259 . C . PASS END=68171259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 68173277 . C . PASS END=68173369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:51:0,104,1800:0,104,255:40,0 chr1 68512291 . T . PASS END=68512291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 68512292 . C . PASS END=68512292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 68512293 . A . PASS END=68512306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 68512307 . T . PASS END=68512307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 68512308 . T . PASS END=68512367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,955:0,81,255:40,0 chr1 68512368 . C . PASS END=68512368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1560:0,61,255:40,0 chr1 68512369 . G . PASS END=68512403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,108,1620:0,119,255:40,0 chr1 68512404 . G . PASS END=68512440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1382:0,87,255:39,0 chr1 68512441 . A G, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.239;ReadPosRankSum=3.269;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,23,0:0.590,0.000:39:12,11,0:4,12,0:47:85,0,47,778,572,1350:255,0,255:15,0:5.0000e+01,8.3095e-05,5.0393e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,4,12,11:12,4,10,13 chr1 68512442 . A . PASS END=68512478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1485:0,114,255:38,0 chr1 68512479 . T . PASS END=68512627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1235:0,86,255:40,0 chr1 68512628 . A . PASS END=68512630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 68512631 . G . PASS END=68512633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 68512634 . T . PASS END=68512635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:24,0 chr1 68512636 . G . PASS END=68512638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 68512639 . C . PASS END=68512640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:31:0,78,1170:0,93,255:26,0 chr1 68512641 . G . PASS END=68512642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:28,0 chr1 68512643 . A . PASS END=68512648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 68512649 . G . PASS END=68512651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 68512652 . T . PASS END=68512653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 68512654 . G . PASS END=68512654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 68512655 . C . PASS END=68512655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 68512656 . C . PASS END=68512656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 68512657 . C . PASS END=68512669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:24,0 chr1 68512670 . T . PASS END=68512684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:20:0,48,720:0,60,255:19,0 chr1 68512685 . C . PASS END=68512688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 68512689 . T . PASS END=68512699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 68512700 . C . PASS END=68512703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 68512704 . T . PASS END=68512704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 68512705 . G . PASS END=68512706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:22,0 chr1 68512707 . T . PASS END=68512707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 68512708 . G . PASS END=68512721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 68512722 . G . PASS END=68512722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 68512723 . G . PASS END=68512733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 68512734 . C . PASS END=68512734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 68512735 . G . PASS END=68512763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:25,0 chr1 68512764 . T . PASS END=68512765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 68512766 . T . PASS END=68512776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,917:0,75,255:25,0 chr1 68512777 . C . PASS END=68512777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 68512778 . G . PASS END=68512781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:23,0 chr1 68512782 . G . PASS END=68512782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 68512783 . G . PASS END=68512783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 68512784 . T . PASS END=68512784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 68512785 . A . PASS END=68512817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,756:0,66,255:24,0 chr1 68512818 . G . PASS END=68512818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 68512819 . C . PASS END=68512820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 68512821 . G . PASS END=68512861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:35,0 chr1 68512862 . A . PASS END=68512898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1239:0,86,255:35,0 chr1 68512899 . C A, 50.00 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=3.350;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,18,0:0.514,0.000:35:7,8,0:10,10,0:48:85,0,50,615,608,1223:255,0,255:17,0:5.0000e+01,6.5492e-05,5.2961e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,6,12:6,11,10,8 chr1 68512900 . G . PASS END=68512923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1305:0,96,255:34,0 chr1 68512924 . A . PASS END=68512924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:28,0 chr1 68512925 . A . PASS END=68512936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:30,0 chr1 68512937 . T . PASS END=68512942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 68512943 . A . PASS END=68512943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr1 68512944 . G . PASS END=68512944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 68512945 . C . PASS END=68512945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 68512946 . T . PASS END=68512951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 68512952 . T . PASS END=68512952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 68512953 . C . PASS END=68512955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 68512956 . T . PASS END=68512964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:24,0 chr1 68512965 . A . PASS END=68512975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,720:0,42,255:19,0 chr1 68512976 . C . PASS END=68512976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,659:0,8,255:15,0 chr1 68512977 . C . PASS END=68512978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:17,0 chr1 68512979 . A . PASS END=68512979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 68512980 . T . PASS END=68512980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 68564315 . T . PASS END=68564436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:46:0,117,1755:0,131,255:40,2 chr1 68591909 . C . PASS END=68591987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:33:0,85,1158:0,85,255:39,0 chr1 68591988 . A . PASS END=68591988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:29,0 chr1 68591989 . G . PASS END=68592018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1202:0,90,255:31,0 chr1 68603463 . C . PASS END=68603469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:29,0 chr1 68603470 . C . PASS END=68603471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 68603472 . G . PASS END=68603472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 68603473 . G . PASS END=68603544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1107:0,83,255:38,0 chr1 68603545 . A . PASS END=68603545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:32,0 chr1 68603546 . T . PASS END=68603548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1341:0,95,255:34,0 chr1 68603549 . A . PASS END=68603575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1164:0,83,255:33,0 chr1 68603576 . T . PASS END=68603585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,90,255:26,0 chr1 68603586 . C T, 49.93 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=4.168;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:6,7,0:9,7,0:48:85,0,50,501,525,1026:255,0,255:11,0:4.9929e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,5,9:8,7,8,6 chr1 68603587 . G . PASS END=68603604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 68603605 . G . PASS END=68603616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:23:0,42,630:0,69,255:16,0 chr1 68610252 . C . PASS END=68610335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,104,1726:0,104,255:40,0 chr1 68611552 . C . PASS END=68611695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:31:0,83,1216:0,83,255:40,0 chr1 68613819 . G . PASS END=68613882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,120,1800:0,136,255:40,0 chr1 68614246 . C . PASS END=68614246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1235:0,88,255:32,0 chr1 68614247 . T . PASS END=68614248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1136:0,72,255:32,0 chr1 68614249 . T . PASS END=68614249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1266:0,91,255:34,0 chr1 68614250 . C . PASS END=68614250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1241:0,61,255:33,0 chr1 68614251 . A . PASS END=68614252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:35,0 chr1 68614253 . A . PASS END=68614254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:36:0,61,1188:0,61,255:34,0 chr1 68614255 . A . PASS END=68614255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 68614256 . T . PASS END=68614256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:34,0 chr1 68614257 . G . PASS END=68614257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1257:0,56,255:34,0 chr1 68614258 . T . PASS END=68614258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1325:0,95,255:35,0 chr1 68614259 . C . PASS END=68614259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:34,0 chr1 68614260 . A . PASS END=68614261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1242:0,94,255:35,0 chr1 68614262 . A . PASS END=68614262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1103:0,61,255:32,0 chr1 68614263 . T . PASS END=68614267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1205:0,81,255:35,0 chr1 68614268 . A . PASS END=68614268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1255:0,64,255:33,0 chr1 68614269 . G . PASS END=68614272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:38:0,93,1349:0,93,255:40,0 chr1 68614273 . C . PASS END=68614274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:39,0 chr1 68614275 . G . PASS END=68614275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:56:42:0,56,1362:0,56,255:40,1 chr1 68614276 . A . PASS END=68614276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:75:42:0,75,1467:0,75,255:40,1 chr1 68614277 . A . PASS END=68614277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:32:42:0,32,1335:0,32,255:39,0 chr1 68614278 . G . PASS END=68614282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:95:42:0,95,1362:0,95,255:40,0 chr1 68614283 . C . PASS END=68614289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,99,1460:0,99,255:40,0 chr1 68614290 . A . PASS END=68614290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1405:0,71,255:40,0 chr1 68614291 . A . PASS END=68614319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:38:0,82,1356:0,82,255:39,0 chr1 68614320 . G A, 50.00 PASS DP=38;MQ=249.90;MQRankSum=4.700;ReadPosRankSum=1.752;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:9,11,0:10,8,0:48:85,0,50,679,671,1351:255,0,255:19,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,6,13:12,7,8,11 chr1 68614321 . A . PASS END=68614332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1202:0,86,255:33,0 chr1 68614333 . T . PASS END=68614343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,68,255:26,0 chr1 68615871 . C . PASS END=68615882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 68615883 . G . PASS END=68615883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 68615884 . C . PASS END=68615889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:30,0 chr1 68615890 . A . PASS END=68615890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 68615891 . A . PASS END=68615895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr1 68615896 . A . PASS END=68615896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:29,0 chr1 68615897 . T . PASS END=68615999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1148:0,83,255:40,0 chr1 68616000 . A . PASS END=68616000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:26,0 chr1 68616001 . T . PASS END=68616001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 68616002 . T . PASS END=68616002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 68616003 . G . PASS END=68616005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 68616006 . A . PASS END=68616024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,931:0,75,255:26,0 chr1 68616025 . A . PASS END=68616025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 68616026 . G . PASS END=68616031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,947:0,75,255:25,0 chr1 68616032 . A . PASS END=68616032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr1 68616033 . G . PASS END=68616039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 68619200 . T . PASS END=68619221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:34:0,91,1266:0,91,255:39,0 chr1 68619222 . G . PASS END=68619222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1371:0,62,255:37,0 chr1 68619223 . G . PASS END=68619314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:38:0,98,1396:0,98,255:40,0 chr1 68619315 . A . PASS END=68619315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:32,0 chr1 68619316 . G . PASS END=68619333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1166:0,88,255:33,0 chr1 68619334 . C . PASS END=68619336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 68620782 . C . PASS END=68620787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 68620788 . C . PASS END=68620799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1005:0,83,255:33,0 chr1 68620800 . T . PASS END=68620914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:33:0,85,1151:0,85,255:40,0 chr1 68620915 . T . PASS END=68620915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1243:0,67,255:34,0 chr1 68620916 . C . PASS END=68620931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,89,255:34,0 chr1 68620932 . A . PASS END=68620943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:24,0 chr1 68624806 . C . PASS END=68624930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:86:41:0,86,1393:0,86,255:40,0 chr1 68652271 . T . PASS END=68652271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:32,0 chr1 68652272 . C . PASS END=68652332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1172:0,83,255:40,0 chr1 68659633 . T . PASS END=68659882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:84:40:0,84,1260:0,93,255:40,1 chr1 68659883 . T . PASS END=68659903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:25,0 chr1 68659904 . C . PASS END=68659904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr1 68659905 . C . PASS END=68659906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 68659907 . G . PASS END=68659908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:21,0 chr1 68659909 . A . PASS END=68659909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 68659910 . G . PASS END=68659910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:22,0 chr1 68693928 . T . PASS END=68693938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:81:0,120,1800:0,233,255:40,0 chr1 68697386 . C . PASS END=68697399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 68697400 . A . PASS END=68697401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 68697402 . C . PASS END=68697406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:17,0 chr1 68697407 . T . PASS END=68697408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 68697409 . A . PASS END=68697421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr1 68697422 . T . PASS END=68697422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 68697423 . T . PASS END=68697424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 68697425 . G . PASS END=68697425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 68697426 . C . PASS END=68697428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 68697429 . C . PASS END=68697429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:16,0 chr1 68697430 . G . PASS END=68697436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:16,0 chr1 68697437 . G . PASS END=68697437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:13,0 chr1 68697438 . T . PASS END=68697438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 68697439 . T . PASS END=68697439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 68697440 . C . PASS END=68697440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:12,0 chr1 68697441 . C . PASS END=68697441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:12,0 chr1 68697442 . C . PASS END=68697443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 68697444 . G . PASS END=68697445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 68697446 . C . PASS END=68697446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 68697447 . T . PASS END=68697447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 68697448 . C . PASS END=68697448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 68697449 . T . PASS END=68697453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,443:0,25,255:13,0 chr1 68697454 . T . PASS END=68697454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 68697455 . T . PASS END=68697455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 68697456 . G . PASS END=68697456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 68697457 . T . PASS END=68697457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 68697458 . T . LowGQ END=68697458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,388:13,0,255:11,0 chr1 68697459 . C . PASS END=68697459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 68697460 . C . PASS END=68697460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr1 68697461 . T . PASS END=68697464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 68697465 . A . PASS END=68697465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 68697466 . A . LowGQ END=68697467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,360:0,0,255:11,0 chr1 68697468 . G . PASS END=68697468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 68697469 . T . LowGQ END=68697469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,366:0,0,255:11,0 chr1 68697470 . C . PASS END=68697470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 68697471 . G . PASS END=68697472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 68697473 . T . PASS END=68697475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 68697476 . C . LowGQ END=68697476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,276:3,0,255:10,0 chr1 68697477 . G . PASS END=68697477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 68697478 . T . LowGQ END=68697478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,335:3,0,255:10,0 chr1 68697479 . T . PASS END=68697479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 68697480 . G . LowGQ END=68697480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,308:19,0,255:9,0 chr1 68697481 . C . PASS END=68697483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 68697484 . T . PASS END=68697484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:8,0 chr1 68697485 . C . PASS END=68697486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 68697487 . C . LowGQ END=68697490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,296:0,0,255:7,0 chr1 68697491 . G . PASS END=68697491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 68697492 . C . PASS END=68697492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 68697493 . T . LowGQ END=68697495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,186:6,0,214:5,0 chr1 68697496 . T . PASS END=68697496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:5,0 chr1 68697497 . T . LowGQ END=68697503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:6:0,0,147:0,0,147:5,0 chr1 68697504 . G . PASS END=68697504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 68697505 . A . PASS END=68697506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 68697507 . C . PASS END=68697507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 68697508 . C . PASS END=68697508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:5,0 chr1 68697877 . C . PASS END=68697982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,117,1800:0,117,255:40,0 chr1 68894513 . G . PASS END=68894513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:91:0,120,1800:0,255,255:40,0 chr1 68894573 . A . PASS END=68894573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,224,255:40,0 chr1 68894699 . T . PASS END=68894699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr1 68894723 . A . PASS END=68894723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 68894829 . G . PASS END=68894829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 68894871 . G . PASS END=68894871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:34,0 chr1 68894899 . G . PASS END=68894899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 68894905 . G . PASS END=68894905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 68894913 . T . PASS END=68894913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1457:0,101,255:36,0 chr1 68894942 . C . PASS END=68894942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 68894948 . C . PASS END=68894948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1565:0,110,255:39,0 chr1 68895035 . G . PASS END=68895035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 68895120 . T . PASS END=68895120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr1 68895267 . T . PASS END=68895267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 68895331 . C . PASS END=68895331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 68895459 . T . PASS END=68895610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:42:0,99,1485:0,116,255:40,0 chr1 68895612 . T . PASS END=68895612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:38:0,90,1350:0,98,255:29,0 chr1 68896748 . C . PASS END=68896859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:50:0,95,1664:0,95,255:40,0 chr1 68896863 . T . PASS END=68896863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 68896957 . T . PASS END=68896957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 68896962 . T . PASS END=68896962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr1 68896964 . C . PASS END=68897059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,174,255:40,0 chr1 68897144 . A . PASS END=68897144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 68897154 . C . PASS END=68897264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:37:0,87,1305:0,93,255:40,0 chr1 68897265 . C . PASS END=68897268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:37:0,66,990:0,94,255:23,0 chr1 68897270 . T . PASS END=68897270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 68897273 . G . PASS END=68897273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 68897282 . T . PASS END=68897282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 68903870 . C . PASS END=68903999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:54:0,120,1800:0,148,255:40,3 chr1 68904625 . C . PASS END=68904764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:48:0,120,1800:0,131,255:40,2 chr1 68904775 . G . PASS END=68904775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 68904866 . A . PASS END=68904866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 68904868 . A . PASS END=68904868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 68904873 . C . PASS END=68905006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,120,1800:0,138,255:40,0 chr1 68905008 . T . PASS END=68905008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,132,255:40,0 chr1 68905244 . C . PASS END=68905318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,130,255:40,0 chr1 68905319 . T . PASS END=68905325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,143,255:40,0 chr1 68906534 . A . PASS END=68906534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 68906536 . C . PASS END=68906683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:45:0,114,1800:0,114,255:40,2 chr1 68910214 . C . PASS END=68910355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,105,1375:0,109,255:40,0 chr1 68910459 . C . PASS END=68910566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,126,255:40,0 chr1 68910577 . T . PASS END=68910577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 68912393 . C . PASS END=68912396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:29,0 chr1 68912397 . T . PASS END=68912398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1069:0,71,255:30,0 chr1 68912399 . T . PASS END=68912529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1180:0,83,255:40,0 chr1 68912530 . G . PASS END=68912543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:24:0,68,1008:0,68,255:25,0 chr1 68912545 . T . PASS END=68912545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 68912553 . A . PASS END=68912553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 68914297 . C . PASS END=68914297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 68914307 . C . PASS END=68914389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:38:0,80,1394:0,80,255:40,0 chr1 68915573 . C . PASS END=68915573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 68915576 . A . PASS END=68915576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 68915578 . T . PASS END=68915588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,132,255:40,1 chr1 68942615 . T . PASS END=68942752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,150,255:40,0 chr1 68943470 . C . PASS END=68943482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,137,255:40,0 chr1 68943483 . T . PASS END=68943627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:51:0,118,1800:0,118,255:40,0 chr1 68943628 . C . PASS END=68943655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,105,1575:0,122,255:40,0 chr1 68944827 . A . PASS END=68945003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:80:32:0,80,1147:0,80,255:40,0 chr1 68947123 . C . PASS END=68947275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:56:0,102,1530:0,132,255:40,0 chr1 68947276 . T . PASS END=68947291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:45:0,84,1260:0,125,255:34,0 chr1 68947292 . A . PASS END=68947295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:66:43:0,66,990:0,113,255:23,0 chr1 68947729 . T . PASS END=68947729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,989:0,90,255:30,0 chr1 68947730 . T . PASS END=68947730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr1 68947731 . T . PASS END=68948580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:32:0,80,1139:0,80,255:40,0 chr1 68948956 . C . PASS END=68948988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,106,1401:0,106,255:40,0 chr1 68949633 . C . PASS END=68949762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:35:0,84,1260:0,89,255:40,0 chr1 68949763 . G . PASS END=68949773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,87,255:26,0 chr1 68952620 . A . PASS END=68952667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,1:130:99:117:0,120,1800:0,255,255:40,0 chr1 68954057 . C . PASS END=68954187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:42:0,110,1488:0,110,255:40,0 chr1 68954599 . T . PASS END=68954717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:54:0,120,1800:0,135,255:40,0 chr1 68955135 . C . PASS END=68955291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:51:0,120,1800:0,123,255:40,0 chr1 68960113 . C . PASS END=68960129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 68960130 . A . PASS END=68960130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,593:0,21,255:18,0 chr1 68960131 . T . PASS END=68960137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,56,255:18,0 chr1 68960138 . C . PASS END=68960152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 68960153 . A . PASS END=68960153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 68960154 . C . PASS END=68960186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,878:0,61,255:26,0 chr1 68960187 . A . PASS END=68960187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:22,0 chr1 68960188 . A . PASS END=68960188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 68960189 . G . PASS END=68960189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:22,0 chr1 68960190 . A . PASS END=68960200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,901:0,64,255:26,0 chr1 68960201 . A . PASS END=68960201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,910:0,50,255:25,0 chr1 68960202 . C . PASS END=68960204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 68960205 . T . PASS END=68960206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:28,0 chr1 68960207 . G . PASS END=68960214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,92,255:39,0 chr1 68960215 . T . PASS END=68960215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1396:0,73,255:37,0 chr1 68960216 . G . PASS END=68960234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:40:0,98,1459:0,98,255:40,0 chr1 68960235 . A . PASS END=68960235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:68:43:0,68,1475:0,68,255:35,0 chr1 68960236 . C . PASS END=68960350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1321:0,84,255:40,0 chr1 68960351 . C . PASS END=68960351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr1 68960352 . T . PASS END=68960365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:30,0 chr1 68960366 . T . PASS END=68960376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:27:0,60,900:0,73,255:26,0 chr1 68960377 . C . PASS END=68960378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr1 68962635 . C . PASS END=68962636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 68962637 . G . PASS END=68962639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 68962640 . T . PASS END=68962664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:19,0 chr1 68962665 . C . PASS END=68962665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 68962666 . A . PASS END=68962674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 68962675 . C . PASS END=68962682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:12,0 chr1 70034323 . A . PASS END=70034324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 70034499 . A . PASS END=70034499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr1 70034500 . T . PASS END=70034500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 70034501 . G . PASS END=70034501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 70034502 . T . PASS END=70034502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 70034503 . G . PASS END=70034503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 70035129 . A . PASS END=70035171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,148,255:40,0 chr1 70035172 . G . LowGQ END=70035172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,11:62:0:62:0,0,1482:11,0,255:40,0 chr1 70035173 . C . PASS END=70035187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:61:0,120,1800:0,150,255:40,0 chr1 70144064 . G . PASS END=70144161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:41:0,95,1506:0,95,255:40,0 chr1 70181901 . A . PASS END=70181901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr1 70225874 . T . PASS END=70225879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,911:0,64,255:26,0 chr1 70225880 . G . PASS END=70225909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:34:0,91,1242:0,91,255:37,0 chr1 70225910 . T . PASS END=70225910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:36,0 chr1 70225911 . C . PASS END=70226076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:91:40:0,91,1487:0,91,255:40,0 chr1 70257726 . C . PASS END=70257843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:48:0,120,1800:0,124,255:40,0 chr1 70291431 . G . PASS END=70291509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:69:0,120,1800:0,194,255:40,0 chr1 70300463 . A . PASS END=70300552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,164,255:40,0 chr1 70303910 . A . PASS END=70303966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:97:0,120,1800:0,255,255:40,0 chr1 70339150 . C . PASS END=70339156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,161,255:40,0 chr1 70397190 . G . PASS END=70397253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:55:0,120,1800:0,141,255:40,0 chr1 70446062 . C . PASS END=70446136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,104,1785:0,104,255:40,0 chr1 70451925 . T . PASS END=70452069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,99,1485:0,103,255:40,0 chr1 70460244 . G . PASS END=70460266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:98:0,120,1800:0,255,255:40,0 chr1 70460267 . C . PASS END=70460303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:79:0,120,1800:0,237,255:40,0 chr1 70460304 . A G, 49.93 PASS DP=78;MQ=248.79;MQRankSum=7.193;ReadPosRankSum=3.154;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,38,0:0.487,0.000:78:19,19,0:21,19,0:48:85,0,50,1300,1378,2678:255,0,255:33,0:4.9933e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,26,12,26:25,15,15,23 chr1 70460305 . T . PASS END=70460316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,157,255:40,0 chr1 70477480 . T . PASS END=70477490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1382:0,103,255:40,0 chr1 70477491 . T . PASS END=70477491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1404:0,68,255:38,0 chr1 70477492 . A . PASS END=70477609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,110,1557:0,110,255:40,0 chr1 70478657 . A . PASS END=70478772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:36:0,107,1297:0,107,255:40,0 chr1 70482148 . A . PASS END=70482217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,185,255:40,0 chr1 70484402 . T . PASS END=70484501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,108,1637:0,108,255:40,0 chr1 70486688 . A . PASS END=70486698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,862:0,72,255:26,0 chr1 70486699 . G . PASS END=70486812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:27:0,81,986:0,81,255:40,0 chr1 70488809 . G . PASS END=70488825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 70488826 . C . PASS END=70488833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 70488834 . A . PASS END=70488837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 70488838 . G . PASS END=70488838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 70488839 . G . PASS END=70488843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 70488844 . G . PASS END=70488847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 70488848 . G . PASS END=70488848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 70488849 . G . PASS END=70488897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:19,0 chr1 70488898 . G . PASS END=70488905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:26,0 chr1 70488906 . G . PASS END=70488907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 70488908 . G . PASS END=70488908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 70488909 . A . PASS END=70488912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 70488913 . G . PASS END=70488913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 70488914 . C . PASS END=70489030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:29:0,81,1056:0,83,255:40,0 chr1 70489031 . A . PASS END=70489036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1056:0,74,255:26,0 chr1 70489037 . C . PASS END=70489037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 70489038 . C . PASS END=70489053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:25:0,66,990:0,67,255:26,0 chr1 70489054 . A . PASS END=70489055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,839:0,42,255:22,0 chr1 70489056 . A . PASS END=70489057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 70493854 . G . PASS END=70494054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:80:34:0,80,1215:0,80,255:40,0 chr1 70501804 . G . PASS END=70501915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:37:0,84,1356:0,84,255:40,0 chr1 70502127 . A . PASS END=70502132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 70502133 . C . PASS END=70502280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:27:0,80,1016:0,80,255:40,0 chr1 70502281 . A . PASS END=70502290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1103:0,77,255:27,0 chr1 70502291 . T . PASS END=70502292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 70502293 . T . PASS END=70502298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,67,255:26,0 chr1 70502299 . G . PASS END=70502307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,810:0,42,255:19,0 chr1 70503796 . G . PASS END=70503819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1231:0,89,255:37,0 chr1 70503820 . T . PASS END=70503820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1211:0,67,255:35,0 chr1 70503821 . C . PASS END=70504014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:36:0,88,1138:0,88,255:40,0 chr1 70504015 . A . PASS END=70504016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:36:0,73,1124:0,73,255:34,0 chr1 70504017 . C . PASS END=70504027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1252:0,92,255:36,0 chr1 70504028 . T . PASS END=70504028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1246:0,75,255:34,0 chr1 70504029 . C . PASS END=70504054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:36:0,80,1303:0,80,255:36,0 chr1 70504055 . A . PASS END=70504055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 70504056 . G . PASS END=70504061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1208:0,83,255:32,0 chr1 70504062 . A . PASS END=70504062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:28,0 chr1 70504063 . C . PASS END=70504204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1156:0,83,255:40,0 chr1 70504205 . T . PASS END=70504205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1541:0,75,255:40,0 chr1 70504206 . T . PASS END=70504396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:46:0,90,1608:0,90,255:40,0 chr1 70504397 . A . PASS END=70504397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1659:0,75,255:40,0 chr1 70504398 . G . PASS END=70504441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:36:0,93,1280:0,94,255:40,0 chr1 70504442 . T . PASS END=70504442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:31,0 chr1 70504443 . C . PASS END=70504477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1135:0,85,255:36,0 chr1 70504478 . A . PASS END=70504478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1119:0,50,255:29,0 chr1 70504479 . T . PASS END=70504485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:31,0 chr1 70504486 . T . PASS END=70504490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1041:0,76,255:28,0 chr1 70504491 . C . PASS END=70504507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1215:0,95,255:34,0 chr1 70504508 . A . PASS END=70504508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1030:0,60,255:28,0 chr1 70504509 . T . PASS END=70504522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1124:0,83,255:32,0 chr1 70504523 . T . PASS END=70504523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 70504524 . A . PASS END=70504534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:32,0 chr1 70504535 . A . PASS END=70504535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,988:0,63,255:30,0 chr1 70504536 . G . PASS END=70504544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1171:0,86,255:34,0 chr1 70504545 . T . PASS END=70504545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:34,0 chr1 70504546 . A . PASS END=70504549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1288:0,105,255:35,0 chr1 70504550 . A . PASS END=70504550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 70504551 . G . PASS END=70504987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:82:34:0,82,1219:0,82,255:40,2 chr1 70504988 . A . PASS END=70504988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:28,0 chr1 70504989 . C . PASS END=70504993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1215:0,86,255:29,0 chr1 70504994 . A . PASS END=70505031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 70505032 . G . PASS END=70505034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 70505035 . C . PASS END=70505059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,65,255:26,0 chr1 70505060 . C . PASS END=70505438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1202:0,83,255:40,0 chr1 70505439 . A . PASS END=70505439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:30,0 chr1 70505440 . G . PASS END=70505444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:31,0 chr1 70505445 . T . PASS END=70505451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,86,255:26,0 chr1 70505452 . T . PASS END=70505452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:24,0 chr1 70505453 . A . PASS END=70505459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1000:0,68,255:26,0 chr1 70505460 . C . PASS END=70505464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,65,255:19,0 chr1 70505465 . C . PASS END=70505467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 70505468 . T . PASS END=70505471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 70505472 . A . PASS END=70505476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:39:21:0,39,585:0,49,255:13,0 chr1 70509637 . A . PASS END=70509777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:93:34:0,93,1380:0,102,255:40,0 chr1 70518709 . A . PASS END=70518828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,102,1530:0,110,255:40,0 chr1 70541760 . G . PASS END=70541950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:28:0,84,979:0,84,255:40,0 chr1 70541951 . G . PASS END=70541951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 70541952 . C . PASS END=70541953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 70541954 . A . PASS END=70541963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:23,0 chr1 70541964 . G . PASS END=70541981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,54,255:19,0 chr1 70555410 . T . PASS END=70555502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,135,255:40,0 chr1 70561131 . T . PASS END=70561154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:112:0,120,1800:0,255,255:40,0 chr1 70573433 . A . PASS END=70573505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:36:0,96,1440:0,108,255:40,0 chr1 70573506 . T . PASS END=70573509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,92,255:26,0 chr1 70587461 . A . PASS END=70587570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,135,255:40,0 chr1 70594221 . G . PASS END=70594237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:88:0,120,1800:0,234,255:40,0 chr1 70611483 . T . PASS END=70611588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:98:40:0,98,1485:0,98,255:40,0 chr1 70614170 . C . PASS END=70614355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:44:0,114,1710:0,132,255:40,2 chr1 70616811 . C . PASS END=70616888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,115,1545:0,115,255:40,0 chr1 70618116 . C . PASS END=70618226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,120,1800:0,122,255:40,0 chr1 70621372 . C . PASS END=70621479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:48:0,113,1610:0,113,255:40,0 chr1 70625013 . C . PASS END=70625121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,151,255:40,0 chr1 70639148 . C . PASS END=70639193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,123,255:40,0 chr1 70639305 . A . PASS END=70639392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:65:0,120,1800:0,168,255:40,0 chr1 70641493 . C . PASS END=70641665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:89:35:0,89,1225:0,89,255:40,0 chr1 70644534 . C . PASS END=70644676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,114,1710:0,155,255:40,0 chr1 70646769 . T . PASS END=70646892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:35:0,96,1274:0,101,255:40,0 chr1 70650468 . T . PASS END=70650597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:93:40:0,93,1452:0,93,255:40,0 chr1 70652948 . C . PASS END=70653021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,188,255:40,0 chr1 70654775 . A . PASS END=70654931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:41:0,99,1482:0,99,255:40,0 chr1 70654932 . T . PASS END=70654955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:46:0,81,1215:0,107,255:40,0 chr1 70654956 . A . PASS END=70654956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:75:45:0,75,1125:0,135,255:25,0 chr1 70671073 . C . PASS END=70671074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 70671075 . T . PASS END=70671083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr1 70671084 . T . PASS END=70671084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:27,0 chr1 70671085 . T . PASS END=70671088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 70671089 . A . PASS END=70671089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 70671090 . C . PASS END=70671200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1111:0,81,255:37,0 chr1 70671201 . G . PASS END=70671203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 70671204 . A . PASS END=70671204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 70671205 . T . PASS END=70671206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 70671207 . C . PASS END=70671210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 70671211 . T . PASS END=70671223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 70687320 . A . PASS END=70687329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:19,0 chr1 70687330 . C . PASS END=70687336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 70687337 . C . PASS END=70687339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 70687340 . C . PASS END=70687344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 70687345 . G . PASS END=70687345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 70687346 . C . PASS END=70687346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 70687347 . A . PASS END=70687347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 70687348 . C . PASS END=70687348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 70687349 . T . PASS END=70687349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 70687350 . G . PASS END=70687351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 70687352 . A . PASS END=70687352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 70687353 . G . PASS END=70687353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 70687354 . G . PASS END=70687360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 70687361 . C . PASS END=70687366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 70687367 . C . PASS END=70687367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,938:0,45,255:25,0 chr1 70687368 . G . PASS END=70687371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 70687372 . G . PASS END=70687373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 70687374 . C . PASS END=70687389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1022:0,68,255:26,0 chr1 70687390 . G . PASS END=70687390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 70687391 . T . PASS END=70687394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 70687395 . G . PASS END=70687395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 70687396 . G . PASS END=70687404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 70687405 . G . PASS END=70687405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 70687406 . C . PASS END=70687414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,884:0,72,255:24,0 chr1 70687415 . C . PASS END=70687415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 70687416 . G . PASS END=70687417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 70687418 . G . PASS END=70687419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 70687420 . T . PASS END=70687421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 70687422 . A . PASS END=70687422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 70687423 . T . PASS END=70687429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 70687430 . G . PASS END=70687431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,836:0,53,255:19,0 chr1 70687432 . C . PASS END=70687433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 70687434 . A . PASS END=70687434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 70687435 . A . PASS END=70687437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 70687438 . T . PASS END=70687438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,741:0,36,255:19,0 chr1 70687439 . C . PASS END=70687448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:23,0 chr1 70687449 . G . PASS END=70687449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 70687450 . C . PASS END=70687460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:24,0 chr1 70687461 . C . PASS END=70687461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 70687462 . A . PASS END=70687475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,953:0,65,255:26,0 chr1 70687476 . T . PASS END=70687476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:24,0 chr1 70687477 . T . PASS END=70687492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 70687493 . G . PASS END=70687493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 70687494 . A . PASS END=70687494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 70687495 . T . PASS END=70687495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 70687496 . C . PASS END=70687497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 70687498 . A . PASS END=70687498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 70687499 . C . PASS END=70687504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 70687505 . G . PASS END=70687505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 70687506 . C . PASS END=70687507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 70687508 . C . PASS END=70687508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 70687509 . C . PASS END=70687509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 70687510 . T . PASS END=70687510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,621:0,30,255:19,0 chr1 70687511 . C . PASS END=70687522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 70694105 . T . PASS END=70694105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:29,0 chr1 70694106 . G . PASS END=70694238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:34:0,84,1172:0,84,255:40,0 chr1 70697542 . T . PASS END=70697591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,100,1304:0,100,255:40,0 chr1 70697794 . A . PASS END=70698057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:33:0,81,1215:0,99,255:40,0 chr1 70698058 . C . PASS END=70698060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 70700379 . A . PASS END=70700468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:40:0,81,1215:0,104,255:40,0 chr1 70700469 . C . PASS END=70700471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:40:0,72,1080:0,103,255:26,0 chr1 70701184 . T . PASS END=70701233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,148,255:40,0 chr1 70703108 . G . PASS END=70703235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,105,1575:0,120,255:40,0 chr1 70705122 . A . PASS END=70705203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,109,1755:0,109,255:40,0 chr1 70710367 . G . PASS END=70710498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:42:0,87,1305:0,96,255:40,0 chr1 70712501 . A . PASS END=70712590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:62:0,120,1800:0,170,255:40,0 chr1 70715614 . T . PASS END=70715730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:53:0,120,1800:0,126,255:40,0 chr1 70716048 . A . PASS END=70716186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,2:124:99:93:0,120,1800:0,234,255:40,2 chr1 70716291 . C . PASS END=70716488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:53:0,120,1800:0,143,255:40,0 chr1 70728400 . T . PASS END=70728530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,99,1485:0,131,255:40,0 chr1 70736539 . C . PASS END=70736639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,165,255:40,0 chr1 70740403 . A . PASS END=70740501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,108,1639:0,108,255:40,0 chr1 70742448 . T . PASS END=70742471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1119:0,82,255:40,0 chr1 70742472 . T . PASS END=70742472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:42:51:0,42,1598:0,42,255:40,0 chr1 70742473 . C . PASS END=70742487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,156,255:40,0 chr1 70742488 . T . PASS END=70742527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,113,1800:0,113,255:40,0 chr1 70758071 . C . PASS END=70758206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,100,1249:0,100,255:40,2 chr1 70758207 . T . PASS END=70758207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1582:0,69,255:39,2 chr1 70758208 . C . PASS END=70758217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:39:0,88,1551:0,88,255:38,0 chr1 70758218 . G . PASS END=70758232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:29:0,69,1035:0,87,255:26,0 chr1 70761813 . T . PASS END=70761941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:37:0,96,1440:0,101,255:40,0 chr1 70761942 . T . PASS END=70761944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:40:0,78,1170:0,120,255:26,0 chr1 70766447 . C . PASS END=70766591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,99,1541:0,99,255:40,0 chr1 70771907 . C . PASS END=70771973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,167,255:40,0 chr1 70779428 . C . PASS END=70779473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:110:0,120,1800:0,255,255:40,0 chr1 70781164 . C . PASS END=70781249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,187,255:40,0 chr1 70790536 . T . PASS END=70790640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1280:0,90,255:40,0 chr1 70801741 . C . PASS END=70801782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,146,255:40,0 chr1 70819662 . C . PASS END=70819701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:18,0 chr1 70819702 . A . PASS END=70819721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:22,0 chr1 70819722 . C . PASS END=70819723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 70819724 . C . PASS END=70819731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 70819732 . G . PASS END=70819732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 70819733 . A . PASS END=70819733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 70819734 . C . PASS END=70819744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,652:0,43,255:19,0 chr1 70819745 . A . PASS END=70819757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 70819758 . C . PASS END=70819758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 70819759 . G . PASS END=70819765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 70819766 . C . PASS END=70819767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,775:0,50,255:19,0 chr1 70819768 . G . PASS END=70819772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 70819773 . C . PASS END=70819773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 70819774 . A . PASS END=70819789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 70819790 . A . PASS END=70819798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,684:0,46,255:19,0 chr1 70819799 . G . PASS END=70819809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 70819810 . A . PASS END=70819810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,674:0,46,255:19,0 chr1 70819811 . A . PASS END=70819816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 70819817 . G . PASS END=70819838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,676:0,43,255:18,0 chr1 70819839 . C . PASS END=70819839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 70819840 . G . PASS END=70819879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 70819880 . T . PASS END=70819882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 70819883 . G . PASS END=70819884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 70819885 . G . PASS END=70819885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 70819886 . G . PASS END=70819924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,44,255:19,0 chr1 70819925 . T . PASS END=70819927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 70819928 . C . PASS END=70819928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 70819929 . T . PASS END=70819929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 70819930 . G . PASS END=70819930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 70819931 . A . PASS END=70819944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,862:0,66,255:25,0 chr1 70819945 . A . PASS END=70819945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:24,0 chr1 70819946 . G . PASS END=70819961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 70819962 . C . PASS END=70819962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 70819963 . A . PASS END=70819964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 70819965 . T . PASS END=70819965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr1 70819966 . C . PASS END=70819967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 70819968 . T . PASS END=70819968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 70819969 . G . PASS END=70819970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 70819971 . T . PASS END=70819972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 70819973 . C . PASS END=70819974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:25,0 chr1 70819975 . G . PASS END=70819977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 70819978 . A . PASS END=70819978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 70819979 . A . PASS END=70819980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 70819981 . G . PASS END=70819981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:26,0 chr1 70819982 . G . PASS END=70819982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 70819983 . T . PASS END=70819986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 70819987 . G . PASS END=70819990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 70819991 . A . PASS END=70819996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,992:0,68,255:26,0 chr1 70819997 . G . PASS END=70819997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 70819998 . C . PASS END=70820003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 70820004 . C . PASS END=70820004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 70820005 . T . PASS END=70820005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 70820006 . T . PASS END=70820007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 70820008 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=1.692;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:9,5,0:4,8,0:48:85,0,50,465,465,930:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,5,8:6,7,9,4 chr1 70820009 . T . PASS END=70820040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,900:0,61,255:26,0 chr1 70820041 . T . PASS END=70820041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,757:0,25,255:22,0 chr1 70820042 . T . PASS END=70820045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 70820046 . T . PASS END=70820049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 70820050 . C . PASS END=70820056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 70820057 . T . PASS END=70820074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:24,0 chr1 70820075 . A . PASS END=70820091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 70820635 . A . PASS END=70820661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr1 70820662 . C . PASS END=70820666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:22,0 chr1 70820667 . A . PASS END=70820667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,569:0,32,255:20,0 chr1 70820668 . C . PASS END=70820670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:24,0 chr1 70820671 . T . PASS END=70820671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 70820672 . C . PASS END=70820677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,833:0,72,255:26,0 chr1 70820678 . C . PASS END=70820678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 70820679 . T . PASS END=70820686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 70820687 . C . PASS END=70820693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:29,0 chr1 70820694 . G . PASS END=70820696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:25,0 chr1 70820697 . A . PASS END=70820714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1255:0,86,255:30,0 chr1 70820715 . G . PASS END=70820715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 70820716 . C . PASS END=70820716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 70820717 . A . PASS END=70820717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr1 70820718 . C . PASS END=70820724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:89:31:0,89,1089:0,89,255:34,0 chr1 70820725 . T . PASS END=70820725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:32,0 chr1 70820726 . G . PASS END=70820832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1167:0,83,255:39,0 chr1 70820833 . T . PASS END=70820842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,71,255:26,0 chr1 70820843 . A . PASS END=70820875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,62,255:23,0 chr1 70820876 . A . PASS END=70820878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 70820879 . C . PASS END=70820879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,63,255:12,0 chr1 70820880 . G A, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=1.247;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:6,5,0:4,5,0:48:85,0,50,329,358,687:255,0,255:7,0:5.0000e+01,6.5233e-05,5.3000e+01,3.2885e+02,3.9249e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,9,5,5:5,5,4,6 chr1 70820881 . G . PASS END=70820887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:20:0,33,495:0,60,255:13,0 chr1 70820888 . G . PASS END=70820888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:27:20:0,27,405:0,60,255:9,0 chr1 70820889 . G . PASS END=70820891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:30:20:0,30,450:0,44,255:10,0 chr1 70831829 . A . PASS END=70831830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1568:0,116,255:40,0 chr1 70831831 . T . PASS END=70831831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1460:0,77,255:40,0 chr1 70831832 . G . PASS END=70832011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:45:0,120,1800:0,121,255:40,0 chr1 70832127 . G . PASS END=70832220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:71:0,120,1800:0,180,255:40,0 chr1 70876948 . T . PASS END=70876948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 70877096 . A . PASS END=70877096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 70877099 . A . PASS END=70877257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1141:0,82,255:40,0 chr1 70877258 . C . PASS END=70877266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr1 70881639 . G . PASS END=70881720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:46:0,114,1710:0,138,255:40,0 chr1 70883620 . G . PASS END=70883715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,99,1485:0,124,255:40,0 chr1 70883722 . G . PASS END=70883722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1443:0,82,255:32,0 chr1 70887249 . G . PASS END=70887358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:47:0,120,1800:0,125,255:40,0 chr1 70889968 . C . PASS END=70890097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1215:0,86,255:40,0 chr1 70890098 . A . PASS END=70890099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1070:0,77,255:26,0 chr1 70895474 . C . PASS END=70895474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 70895477 . C . PASS END=70895534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,131,255:40,0 chr1 70895985 . G . PASS END=70895985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:30,0 chr1 70896000 . G . PASS END=70896077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:94:34:0,94,1288:0,94,255:40,0 chr1 70896087 . A . PASS END=70896087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 70897766 . C . PASS END=70897918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1139:0,80,255:40,0 chr1 70899511 . G . PASS END=70899517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:25,0 chr1 70899518 . C . PASS END=70899518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 70899519 . T . PASS END=70899519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,825:0,48,255:25,0 chr1 70899520 . C . PASS END=70899533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1003:0,84,255:33,0 chr1 70899534 . G . PASS END=70899535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:63:34:0,63,1180:0,63,255:32,0 chr1 70899536 . G . PASS END=70899547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:34:0,94,1312:0,94,255:37,0 chr1 70899548 . T . PASS END=70899548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:37,0 chr1 70899549 . C . PASS END=70899632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:36:0,92,1308:0,92,255:40,0 chr1 70900808 . C . PASS END=70900861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,163,255:40,2 chr1 70904371 . G . PASS END=70904473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:47:0,120,1800:0,141,255:40,0 chr1 70904474 . C . PASS END=70904509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:61:0,120,1800:0,136,255:40,0 chr1 70904784 . C . PASS END=70904810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,146,255:40,0 chr1 70904908 . G . PASS END=70904908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,177,255:40,0 chr1 70905027 . G . PASS END=70905027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 70905070 . T . PASS END=70905070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr1 70905144 . T . PASS END=70905144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:111:0,120,1800:0,255,255:40,0 chr1 70905146 . A . PASS END=70905146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,2:111:99:111:0,120,1800:0,255,255:40,0 chr1 70905180 . C . PASS END=70905181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,1:111:99:111:0,120,1800:0,255,255:40,0 chr1 70905221 . G . PASS END=70905221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr1 71318479 . T . PASS END=71318551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:146,1:147:99:123:0,120,1800:0,255,255:40,0 chr1 71328052 . T . PASS END=71328080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1120:0,83,255:36,0 chr1 71331372 . T . PASS END=71331392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1304:0,93,255:37,0 chr1 71331393 . G . PASS END=71331429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,117,1520:0,120,255:40,0 chr1 71331430 . G A, 47.11 PASS DP=44;MQ=250.00;MQRankSum=5.574;ReadPosRankSum=4.404;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,18,0:0.409,0.000:44:15,10,0:11,8,0:46:82,0,50,636,930,1566:255,0,255:25,0:4.7111e+01,1.0613e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,11,7:10,16,9,9 chr1 71331431 . G . PASS END=71331488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:38:0,98,1336:0,98,255:40,0 chr1 71331489 . T . PASS END=71331497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:37:0,60,900:0,111,255:21,0 chr1 71331498 . A G, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,22,0:0,14,0:105:193,108,0,1387,108,1387:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,25:0,0,13,23 chr1 71331499 . G . PASS END=71331500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,108,255:20,0 chr1 71331501 . T . PASS END=71331516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,644:0,54,255:18,0 chr1 71334927 . T . PASS END=71334927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr1 71334928 . A . PASS END=71334929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 71334930 . C . PASS END=71334930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 71334931 . A . PASS END=71334994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1041:0,80,255:35,0 chr1 71334995 . C . PASS END=71335002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,77,255:26,0 chr1 71377650 . T C, 50.00 PASS DP=71;MQ=250.00;MQRankSum=7.205;ReadPosRankSum=4.779;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,39,0:0.549,0.000:71:18,21,0:14,18,0:48:85,0,49,1284,1116,2400:255,0,255:31,0:5.0000e+01,6.9375e-05,5.2256e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,14,15,24:14,18,17,22 chr1 71418590 . T . PASS END=71418591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 71418592 . A . PASS END=71418592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 71418593 . T . PASS END=71418593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 71418594 . T . PASS END=71418608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr1 71418609 . G . PASS END=71418609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 71418610 . A . PASS END=71418611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:32,0 chr1 71418612 . A . PASS END=71418612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1045:0,63,255:32,0 chr1 71418613 . T . PASS END=71418620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1231:0,86,255:39,0 chr1 71418621 . T . PASS END=71418621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:38,0 chr1 71418622 . A . PASS END=71418726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1406:0,81,255:40,0 chr1 71418727 . G . PASS END=71418727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:31,0 chr1 71418728 . C . PASS END=71418739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,988:0,85,255:33,0 chr1 71418740 . T . PASS END=71418742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 71419446 . T . PASS END=71419461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:94:0,120,1800:0,236,255:40,0 chr1 71419462 . C . PASS END=71419472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:91:0,120,1800:0,255,255:40,0 chr1 71437413 . T . PASS END=71437416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,221,255:40,0 chr1 71439976 . T . PASS END=71440071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,1:135:99:84:0,120,1800:0,219,255:40,0 chr1 71463990 . A . PASS END=71464002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:88:0,120,1800:0,231,255:40,0 chr1 71467863 . T . PASS END=71467943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:31:0,80,1177:0,80,255:40,0 chr1 71474701 . T . PASS END=71474711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:79:0,120,1800:0,237,255:40,0 chr1 71475141 . T . PASS END=71475154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,1:116:99:116:0,120,1800:0,255,255:40,0 chr1 71477898 . T . PASS END=71478167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:80:35:0,80,1215:0,80,255:40,0 chr1 71512364 . C . PASS END=71512365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 71512366 . G . PASS END=71512370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 71512371 . G . PASS END=71512371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 71512372 . G . PASS END=71512374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:22,0 chr1 71512375 . A . PASS END=71512375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 71512376 . C . PASS END=71512377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 71512378 . A . PASS END=71512378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 71512379 . G . PASS END=71512397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr1 71512398 . A . PASS END=71512398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 71512399 . T . PASS END=71512400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 71512401 . A . PASS END=71512401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 71512402 . T . PASS END=71512435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 71512436 . G . PASS END=71512445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,50,255:20,0 chr1 71512446 . T . PASS END=71512451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:32:19:0,32,540:0,32,255:14,0 chr1 71512452 . C . PASS END=71512457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 71512458 . T . PASS END=71512458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 71512459 . G . PASS END=71512460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 71512461 . G . PASS END=71512461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 71512462 . A . PASS END=71512471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 71512472 . C . PASS END=71512472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 71512473 . T . PASS END=71512487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 71512488 . G . PASS END=71512489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 71512490 . C . PASS END=71512556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,584:0,41,255:19,0 chr1 71512557 . G . PASS END=71512557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 71512558 . C . PASS END=71512560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 71512561 . A . PASS END=71512561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 71512562 . G . PASS END=71512581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 71512582 . T . PASS END=71512582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 71512583 . G . PASS END=71512586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 71512587 . C . PASS END=71512587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 71512588 . A . PASS END=71512588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 71512589 . G . PASS END=71512605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 71512606 . T . PASS END=71512625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 71512626 . G . PASS END=71512628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 71512629 . C . PASS END=71512642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 71512643 . C A, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.204;ReadPosRankSum=2.202;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:2,6,0:5,1,0:48:85,0,50,250,250,501:221,0,229:4,0:5.0000e+01,6.5233e-05,5.3000e+01,2.5038e+02,2.8512e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,2,5:2,5,1,6 chr1 71512644 . G . PASS END=71512654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 71512655 . C . PASS END=71512680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,310:0,24,255:9,0 chr1 71512681 . G . PASS END=71512689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 71512690 . G . PASS END=71512690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 71512691 . C . PASS END=71512718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr1 71512719 . A . PASS END=71512781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 71512782 . C . PASS END=71512814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 71512815 . C . PASS END=71512819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 71512820 . G . PASS END=71512820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 71512821 . A . PASS END=71512829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 71512830 . G . PASS END=71512830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 71512831 . A . PASS END=71512831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 71512832 . G . PASS END=71512833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 71512834 . A . PASS END=71512842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,462:0,42,255:15,0 chr1 71512843 . A . PASS END=71512843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 71512844 . A . PASS END=71512849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 71512850 . C . PASS END=71512850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 71512851 . A . PASS END=71512860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 71512861 . C . PASS END=71512862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr1 71512863 . A . PASS END=71512866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr1 71512867 . A . PASS END=71512867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,415:0,28,255:13,0 chr1 71512868 . G . PASS END=71512870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 71512871 . G . PASS END=71512871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 71512872 . C . PASS END=71512876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 71512877 . C . PASS END=71512915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 71512916 . C . PASS END=71512916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 71512917 . A . PASS END=71512917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr1 71512918 . G . PASS END=71512921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 71512922 . C . PASS END=71512938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 71512939 . G . PASS END=71512939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 71512940 . G . PASS END=71512952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 71512953 . T . PASS END=71512953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 71512954 . G . PASS END=71512976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 71512977 . A . PASS END=71512977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 71512978 . G . PASS END=71512980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 71512981 . A . PASS END=71512981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 71512982 . G . PASS END=71512987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 71512988 . G . PASS END=71512988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 71512989 . C . PASS END=71512989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 71512990 . A . PASS END=71512990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 71512991 . C . PASS END=71512993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,557:0,32,255:13,0 chr1 71512994 . C . PASS END=71513009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 71513010 . C . PASS END=71513049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,743:0,60,255:26,0 chr1 71513050 . G . PASS END=71513053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr1 71513054 . G . PASS END=71513054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 71513055 . G . PASS END=71513059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 71513060 . T . PASS END=71513060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 71513061 . G . PASS END=71513077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr1 71513078 . A . PASS END=71513078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 71513079 . G . PASS END=71513079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 71513080 . T . PASS END=71513080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:26,0 chr1 71513081 . G . PASS END=71513083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 71513084 . C . PASS END=71513085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 71513086 . G . PASS END=71513096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1156:0,87,255:31,0 chr1 71513097 . G . PASS END=71513097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:30,0 chr1 71513098 . G . PASS END=71513162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1133:0,82,255:34,0 chr1 71513163 . G . PASS END=71513163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 71513164 . C . PASS END=71513179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 71513180 . G . PASS END=71513180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 71513181 . G . PASS END=71513182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 71513183 . C . PASS END=71513200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,1000:0,70,255:26,0 chr1 71513201 . G . PASS END=71513204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,82,255:28,0 chr1 71513205 . T . PASS END=71513219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:24,0 chr1 71513220 . C . PASS END=71513220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 71513221 . A . PASS END=71513232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 71513233 . C . PASS END=71513233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 71513234 . C . PASS END=71513234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 71513235 . C . PASS END=71513235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 71513236 . C . PASS END=71513238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 71513239 . C . PASS END=71513253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:19,0 chr1 71513254 . C . PASS END=71513256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:14,0 chr1 71513257 . T . PASS END=71513257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:13,0 chr1 71513258 . C . PASS END=71513258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr1 71513259 . A . PASS END=71513260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 71514969 . A . PASS END=71514969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr1 71530757 . T . PASS END=71530820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,197,255:40,0 chr1 71531402 . T . PASS END=71531435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,125,255:40,0 chr1 71532459 . C . PASS END=71532599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:43:0,84,1260:0,113,255:40,0 chr1 71532600 . T . PASS END=71532611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:33:0,63,945:0,99,255:26,0 chr1 71532612 . C . PASS END=71532617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:19,0 chr1 71534959 . C . PASS END=71534959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1288:0,94,255:35,0 chr1 71534960 . T . PASS END=71534960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:34,0 chr1 71534961 . T . PASS END=71534978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1341:0,95,255:39,0 chr1 71534979 . T . PASS END=71534979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1209:0,72,255:37,0 chr1 71534980 . C . PASS END=71535045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:40:0,85,1280:0,85,255:40,0 chr1 71536510 . C . PASS END=71536679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:80:32:0,80,1117:0,80,255:40,0 chr1 71537804 . C . PASS END=71537827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,144,255:40,0 chr1 71537828 . A . PASS END=71537828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,9:69:28:69:0,28,1605:0,28,255:40,0 chr1 71537829 . T . PASS END=71537905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:67:0,108,1800:0,108,255:40,0 chr1 71537906 . T . PASS END=71537938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,143,255:40,0 chr1 71538155 . C . PASS END=71538190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:87:0,120,1800:0,239,255:40,0 chr1 71538191 . A G, 48.27 PASS DP=99;MQ=249.51;MQRankSum=8.439;ReadPosRankSum=5.890;FractionInformativeReads=0.990;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:56,42,0:0.429,0.000:98:34,24,0:22,18,0:47:83,0,50,1486,1994,3480:255,0,255:40,0:4.8270e+01,8.6460e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,33,22,20:23,33,22,20 chr1 71538192 . T . PASS END=71538228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:93:0,120,1800:0,233,255:40,0 chr1 71538229 . A . PASS END=71538231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,255,255:40,0 chr1 71542478 . C . PASS END=71542560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:63:0,120,1800:0,157,255:40,0 chr1 71544140 . G . PASS END=71544146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,626:0,60,255:20,0 chr1 71544147 . A . PASS END=71544147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 71544148 . T . PASS END=71544148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 71544149 . T . PASS END=71544149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 71544150 . G . PASS END=71544151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 71544152 . C . PASS END=71544152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 71544153 . A . PASS END=71544157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:27,0 chr1 71544158 . T . PASS END=71544159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,995:0,84,255:29,0 chr1 71544160 . A . PASS END=71544160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr1 71544161 . G . PASS END=71544248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:33:0,86,1241:0,86,255:40,0 chr1 71544339 . C . PASS END=71544391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:75:0,120,1800:0,209,255:40,0 chr1 71546623 . T . PASS END=71546678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,150,255:40,0 chr1 71873129 . T . PASS END=71873138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:32,0 chr1 71873139 . A . PASS END=71873139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:29,0 chr1 71873140 . T . PASS END=71873176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:32:0,80,1139:0,80,255:40,0 chr1 71873177 . C . PASS END=71873177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1582:0,61,255:39,0 chr1 71873178 . A . PASS END=71873241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:34:0,84,1260:0,92,255:40,0 chr1 71873242 . C . PASS END=71873253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:27:0,75,1125:0,80,255:26,0 chr1 72053061 . C . PASS END=72053083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:82:0,120,1800:0,216,255:40,0 chr1 72058500 . G . PASS END=72058514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:37,0 chr1 72058515 . T . PASS END=72058551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,104,1443:0,104,255:40,0 chr1 72058552 . G A, 185.45 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,19,0:0,27,0:135:223,138,0,1784,138,1784:255,138,0:0,0:1.8545e+02,1.3545e+02,0.0000e+00,4.5000e+02,1.7022e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,22:0,0,23,23 chr1 72058553 . G . PASS END=72058589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,138,255:40,0 chr1 72058590 . C . PASS END=72058649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:36:0,84,1301:0,84,255:40,0 chr1 72058650 . G . PASS END=72058650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,981:0,58,255:25,0 chr1 72058651 . C . PASS END=72058651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 72076709 . T . PASS END=72076829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:32:0,89,1089:0,89,255:40,0 chr1 72136430 . C . PASS END=72136431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:102:0,120,1800:0,255,255:40,0 chr1 72145409 . T . PASS END=72145446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:88:0,120,1800:0,255,255:40,0 chr1 72163691 . A . PASS END=72163822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:37:0,101,1382:0,101,255:40,0 chr1 72241855 . C . PASS END=72241977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:39:0,87,1388:0,87,255:40,0 chr1 72241978 . G . PASS END=72241978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:33,0 chr1 72241979 . A . PASS END=72241980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:33,0 chr1 72400762 . C . PASS END=72400994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,1008:0,81,255:40,0 chr1 72748002 . C . PASS END=72748016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr1 72748017 . T . PASS END=72748017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 72748018 . C . PASS END=72748177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1143:0,83,255:40,0 chr1 74492497 . T . PASS END=74492653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:51:0,114,1690:0,114,255:40,0 chr1 74506897 . C . PASS END=74507617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:55:0,120,1800:0,138,255:40,0 chr1 74540345 . C . PASS END=74540474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:60:0,120,1800:0,162,255:40,0 chr1 74544339 . C . PASS END=74544341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:102:0,120,1800:0,255,255:40,0 chr1 74549868 . T . PASS END=74549900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:84:0,120,1800:0,222,255:40,0 chr1 74560745 . C . PASS END=74560807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,168,255:40,0 chr1 74560816 . T . PASS END=74560872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:68:0,120,1800:0,204,255:40,0 chr1 74569606 . T . PASS END=74569692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:37,0 chr1 74569693 . C . PASS END=74569693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:27,0 chr1 74569694 . T . PASS END=74569694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 74569695 . C . PASS END=74569708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,78,255:26,0 chr1 74569709 . A . PASS END=74569731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,621:0,54,255:19,0 chr1 74575078 . A . PASS END=74575211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:67:0,120,1800:0,172,255:40,0 chr1 74575212 . G . PASS END=74575212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,6:89:57:89:0,57,2836:0,57,255:40,8 chr1 74575213 . T . PASS END=74575213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,5:88:70:88:0,70,2758:0,70,255:40,0 chr1 74575214 . T . PASS END=74575237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,158,255:40,0 chr1 74586910 . C . PASS END=74586920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:107:0,120,1800:0,247,255:40,0 chr1 74610124 . T . PASS END=74610162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:62:0,120,1800:0,126,255:40,0 chr1 74610163 . G . PASS END=74610163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,7:68:21:68:0,21,1948:0,21,255:40,7 chr1 74610164 . T . PASS END=74610164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,4:68:57:68:0,57,2090:0,57,255:40,0 chr1 74610165 . T . PASS END=74610195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,125,255:40,0 chr1 74610196 . C . PASS END=74610196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,5:66:64:66:0,64,2037:0,64,255:40,0 chr1 74610197 . A . PASS END=74610207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,101,1800:0,101,255:40,0 chr1 74610208 . A . PASS END=74610208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,5:65:68:65:0,68,2137:0,68,255:40,0 chr1 74610209 . A . PASS END=74610213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:80:61:0,80,1800:0,80,255:40,0 chr1 74610214 . A . PASS END=74610214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:68:60:0,68,1765:0,68,255:40,0 chr1 74610215 . G . PASS END=74610215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:99:60:0,113,1852:0,113,255:40,0 chr1 74610216 . A . PASS END=74610216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:53:60:0,53,1808:0,53,255:30,0 chr1 74610217 . G . PASS END=74610218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:66:59:0,66,990:0,111,255:21,0 chr1 74610219 . A . PASS END=74610228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:54:47:0,54,810:0,61,255:19,0 chr1 74610229 . T . PASS END=74610229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:25:38:0,25,1026:0,25,255:16,0 chr1 74621417 . C . PASS END=74621550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:70:0,120,1800:0,198,255:40,0 chr1 74640840 . T . PASS END=74640863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:13,0 chr1 74640864 . G . PASS END=74640865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 74640866 . T . PASS END=74640880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 74640881 . T . PASS END=74640881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 74640882 . G . PASS END=74640887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 74646430 . C . PASS END=74646456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,220,255:40,0 chr1 74648222 . C . PASS END=74648224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 74648225 . T . PASS END=74648225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,948:0,46,255:27,0 chr1 74648226 . C . PASS END=74648233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,997:0,90,255:30,0 chr1 74648234 . T . PASS END=74648234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 74648235 . G . PASS END=74648235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 74648236 . G . PASS END=74648236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 74648237 . G . PASS END=74648545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:31:0,80,1117:0,80,255:40,1 chr1 74649120 . C . PASS END=74649368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:81:41:0,81,1215:0,110,255:40,0 chr1 74663924 . A . PASS END=74663930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1100:0,87,255:31,0 chr1 74663931 . C . PASS END=74663931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 74663932 . T . PASS END=74664110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:31:0,92,1202:0,92,255:40,0 chr1 74665348 . G . PASS END=74665351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:32,0 chr1 74665352 . A . PASS END=74665352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:31,0 chr1 74665353 . C . PASS END=74665529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:88:35:0,88,1274:0,88,255:40,0 chr1 74667002 . G . PASS END=74667094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:61:0,120,1800:0,160,255:40,0 chr1 74670075 . G . PASS END=74671516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:97:37:0,97,1396:0,97,255:40,0 chr1 74701136 . A . PASS END=74701175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:83:0,120,1800:0,211,255:40,0 chr1 74701786 . A . PASS END=74701894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:75:0,120,1800:0,193,255:40,2 chr1 74705640 . G . PASS END=74705643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:98:0,120,1800:0,255,255:40,0 chr1 74715143 . C . PASS END=74715228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:68:0,120,1800:0,204,255:40,0 chr1 74716356 . G . PASS END=74716453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:91:44:0,91,1378:0,91,255:40,0 chr1 74716455 . T . PASS END=74716455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 74737282 . G . PASS END=74737392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1304:0,94,255:40,0 chr1 74797134 . G . PASS END=74797232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:53:0,120,1800:0,143,255:40,3 chr1 74801695 . G . PASS END=74801826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:49:0,120,1800:0,123,255:40,0 chr1 74801827 . G . PASS END=74801833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,128,255:40,0 chr1 74808526 . T . PASS END=74808670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:55:0,120,1800:0,149,255:40,0 chr1 74808759 . G . PASS END=74808863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:59:0,120,1800:0,131,255:40,0 chr1 74818950 . T . PASS END=74819039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,116,1800:0,116,255:40,0 chr1 74819040 . C . PASS END=74819044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,105,1575:0,147,255:36,0 chr1 74819664 . G . PASS END=74819813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:39:0,101,1433:0,101,255:40,0 chr1 74832940 . G . PASS END=74833026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:68:0,120,1800:0,200,255:40,0 chr1 74833592 . A . PASS END=74833648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,165,255:40,0 chr1 74834706 . A . PASS END=74834798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,99,1511:0,99,255:40,0 chr1 74834891 . G . PASS END=74834948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:72:0,120,1800:0,200,255:40,0 chr1 74835075 . T . PASS END=74835204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,159,255:40,0 chr1 74835205 . T . PASS END=74835205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,6:67:78:67:0,78,1756:0,78,255:40,0 chr1 74835206 . T . PASS END=74835266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1215:0,83,255:40,0 chr1 74835267 . G . PASS END=74835269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,83,255:26,0 chr1 74835972 . G . PASS END=74836095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,134,255:40,0 chr1 74841249 . A . PASS END=74841253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:18,0 chr1 74841254 . G . PASS END=74841264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr1 74841265 . C . PASS END=74841265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:22,0 chr1 74841266 . T . PASS END=74841288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 74867523 . G . PASS END=74867565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,817:0,66,255:26,0 chr1 74867566 . A . PASS END=74867572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 74867573 . G . PASS END=74867573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 74867574 . G . PASS END=74867574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 74867575 . G . PASS END=74867575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 74867576 . G . PASS END=74867579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 74867580 . T . PASS END=74867580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 74867581 . C . PASS END=74867597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 74867598 . A . PASS END=74867598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 74867599 . G . PASS END=74867602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr1 74867603 . G . PASS END=74867603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 74867604 . C . PASS END=74867608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 74867609 . T . PASS END=74867616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,68,255:25,0 chr1 74867617 . A . PASS END=74867631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:19:0,42,630:0,57,255:19,0 chr1 74867632 . A . PASS END=74867639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:13,0 chr1 74867640 . A . PASS END=74867641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:16:0,27,405:0,48,255:9,0 chr1 74883852 . G . PASS END=74883861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,120,1800:0,129,255:40,0 chr1 74901764 . T . PASS END=74901770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,5:94:99:88:0,120,1800:0,162,255:40,0 chr1 74901771 . A . LowGQ END=74901771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,16:103:0:103:0,0,2338:53,0,255:40,0 chr1 74901772 . T . PASS END=74901773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,6:103:99:103:0,120,1800:0,209,255:40,0 chr1 74901774 . C . PASS END=74901774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,13:105:55:105:0,55,2745:0,55,255:40,0 chr1 74901775 . T . PASS END=74901816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,4:115:99:105:0,120,1800:0,130,255:40,0 chr1 74902158 . A . PASS END=74902206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,105,1643:0,105,255:40,0 chr1 74902207 . T . PASS END=74902210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,147,255:40,0 chr1 74905174 . A . PASS END=74905197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,677:0,60,255:26,0 chr1 74905198 . G . PASS END=74905289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1002:0,81,255:40,0 chr1 74905290 . C . PASS END=74905290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 74905291 . G . PASS END=74905295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1096:0,90,255:30,0 chr1 74905296 . T . PASS END=74905296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:27,0 chr1 74905297 . C . PASS END=74905301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 74905302 . G . PASS END=74905306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:25,0 chr1 74929125 . C . PASS END=74929234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:94:36:0,94,1365:0,94,255:40,0 chr1 74930319 . G . PASS END=74930426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,109,1331:0,109,255:40,1 chr1 74935562 . T . PASS END=74935732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:41:0,120,1800:0,123,255:40,0 chr1 74935733 . C . PASS END=74935733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,8:83:66:83:0,66,2454:0,66,255:40,0 chr1 74935734 . T . PASS END=74935735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:83:0,120,1800:0,216,255:40,0 chr1 74935736 . C . PASS END=74935736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,10:83:55:83:0,55,2425:0,55,255:40,0 chr1 74935737 . A . PASS END=74935737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:82:0,120,1800:0,213,255:40,0 chr1 74935738 . C . PASS END=74935738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,11:82:5:82:0,5,2302:0,5,255:40,0 chr1 74935739 . T . PASS END=74936336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:59:0,120,1800:0,130,255:40,2 chr1 74936337 . T . PASS END=74936373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:97:0,120,1800:0,255,255:40,0 chr1 74936374 . A G, 50.00 PASS DP=103;MQ=250.00;MQRankSum=8.710;ReadPosRankSum=4.175;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,56,0:0.544,0.000:103:22,22,0:25,34,0:48:85,0,49,1916,1622,3538:255,0,255:40,0:5.0000e+01,6.8857e-05,5.2334e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,31,22,34:27,20,34,22 chr1 74936375 . T . PASS END=74936411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:88:0,120,1800:0,226,255:40,0 chr1 74936412 . T . PASS END=74937884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:81:38:0,81,1215:0,101,255:40,2 chr1 74937885 . T . PASS END=74937885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 74940979 . C . PASS END=74940987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:25,0 chr1 74940988 . T . PASS END=74940988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 74940989 . T . PASS END=74940991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,931:0,65,255:26,0 chr1 74940992 . T . PASS END=74941255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:27:0,81,1019:0,81,255:40,0 chr1 74941256 . T . PASS END=74941292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,124,255:40,0 chr1 74941293 . G A, 50.00 PASS DP=55;MQ=250.00;MQRankSum=6.280;ReadPosRankSum=1.318;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,29,0:0.537,0.000:54:16,13,0:9,16,0:48:85,0,50,1010,882,1892:255,0,255:24,0:5.0000e+01,6.7563e-05,5.2536e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,10,14,15:12,13,18,11 chr1 74941294 . T . PASS END=74941330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr1 74941331 . G . PASS END=74941494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:33:0,82,1157:0,82,255:40,0 chr1 74945837 . C . PASS END=74945837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 74945838 . T . PASS END=74945852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,800:0,62,255:26,0 chr1 74945853 . A . PASS END=74945863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:31,0 chr1 74945864 . C . PASS END=74945866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 74945867 . C . PASS END=74945867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1197:0,99,255:33,0 chr1 74945868 . A . PASS END=74945869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:32,0 chr1 74945870 . C . PASS END=74945870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:31,0 chr1 74945871 . T . PASS END=74945871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1235:0,102,255:34,0 chr1 74945872 . G . PASS END=74945872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:33,0 chr1 74945873 . G . PASS END=74945873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1319:0,105,255:35,0 chr1 74945874 . T . PASS END=74945876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1249:0,66,255:35,0 chr1 74945877 . T . PASS END=74946268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:33:0,90,1286:0,91,255:40,0 chr1 74946269 . T . PASS END=74946269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:31,0 chr1 74946270 . G . PASS END=74946271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:34,0 chr1 74946272 . G . PASS END=74946272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:34,0 chr1 74946273 . G . PASS END=74946295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:36,0 chr1 74946296 . T . PASS END=74946296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:31,0 chr1 74946297 . G . PASS END=74946644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1252:0,90,255:40,0 chr1 74946645 . A . PASS END=74946652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:31:0,75,1125:0,93,255:26,0 chr1 74948946 . C . PASS END=74949033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:34:0,102,1256:0,102,255:40,0 chr1 74954873 . G . PASS END=74954932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,167,255:40,0 chr1 74957781 . C . PASS END=74957925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:85:29:0,85,1058:0,85,255:40,1 chr1 74957926 . G . PASS END=74957931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:78:40:0,78,1170:0,116,255:26,0 chr1 74957932 . A . PASS END=74957938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1215:0,84,255:27,0 chr1 74957939 . T . PASS END=74957950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,878:0,64,255:25,0 chr1 75002488 . C . PASS END=75002536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,3:81:99:73:0,120,1800:0,157,255:40,0 chr1 75005918 . T . PASS END=75005989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:85:0,120,1800:0,236,255:40,0 chr1 75005990 . C . PASS END=75005997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:77:0,120,1800:0,215,255:40,0 chr1 75009590 . G . PASS END=75009666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:29:0,81,1215:0,87,255:40,0 chr1 75036801 . C . PASS END=75036802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 75036803 . A . PASS END=75036803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 75036804 . G . PASS END=75036810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:30,0 chr1 75036811 . A . PASS END=75036811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 75036812 . C T, 136.37 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,12,0:0,18,0:86:174,89,0,1089,89,1089:255,90,0:0,0:1.3637e+02,8.6367e+01,0.0000e+00,4.5000e+02,1.2114e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,9:0,0,13,17 chr1 75036813 . G . PASS END=75036849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:30:0,89,1109:0,89,255:37,0 chr1 75036850 . T . PASS END=75036925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1213:0,81,255:38,0 chr1 75036926 . T . PASS END=75036926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1056:0,55,255:30,0 chr1 75036927 . C . PASS END=75036927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1062:0,69,255:30,0 chr1 75036928 . T . PASS END=75036935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 75036936 . C . PASS END=75036941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,79,255:26,0 chr1 75036942 . C . PASS END=75036991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:33,0 chr1 75036992 . T . PASS END=75036995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:31:0,72,1095:0,72,255:26,0 chr1 75036996 . C . PASS END=75036996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:25,0 chr1 75036997 . T . PASS END=75037001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 75037002 . C . PASS END=75037032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:33,0 chr1 75037033 . C . PASS END=75037033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:27,0 chr1 75037034 . C . PASS END=75037049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1133:0,90,255:30,0 chr1 75037050 . T . PASS END=75037050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 75037051 . T . PASS END=75037053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 75037054 . T . PASS END=75037057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:25,0 chr1 75037058 . G . PASS END=75037062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 75037063 . A . PASS END=75037063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 75037064 . G . PASS END=75037092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1125:0,83,255:32,0 chr1 75037093 . G . PASS END=75037093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr1 75037094 . G . PASS END=75037106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr1 75037107 . A . PASS END=75037107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:29,0 chr1 75037108 . G . PASS END=75037226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:31:0,86,1178:0,86,255:40,0 chr1 75037227 . T . PASS END=75037227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1221:0,73,255:35,0 chr1 75037228 . T . PASS END=75037273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,103,1338:0,103,255:40,0 chr1 75037274 . T . PASS END=75037274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1346:0,78,255:36,0 chr1 75037275 . A . PASS END=75037276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1278:0,109,255:37,0 chr1 75037277 . T . PASS END=75037277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:36,0 chr1 75037278 . T . PASS END=75037279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1335:0,97,255:37,0 chr1 75037280 . C . PASS END=75037280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1233:0,64,255:35,0 chr1 75037281 . T . PASS END=75037282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1319:0,83,255:37,0 chr1 75037283 . T . PASS END=75037283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr1 75037284 . T . PASS END=75037286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1297:0,84,255:36,0 chr1 75037287 . T . PASS END=75037287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:33,0 chr1 75037288 . T . PASS END=75037310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:81:38:0,81,1267:0,81,255:36,0 chr1 75037311 . T . PASS END=75037311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1311:0,62,255:37,0 chr1 75037312 . G . PASS END=75037318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1235:0,81,255:37,0 chr1 75037319 . C . PASS END=75037319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1203:0,45,255:32,0 chr1 75037320 . C . PASS END=75037331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:84:39:0,84,1311:0,84,255:40,0 chr1 75037332 . T . PASS END=75037332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1404:0,65,255:38,0 chr1 75037333 . G . PASS END=75037610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:37:0,82,1437:0,82,255:40,2 chr1 75037611 . T . PASS END=75037611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1237:0,77,255:32,0 chr1 75037612 . T . PASS END=75037623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,86,255:32,0 chr1 75037624 . C . PASS END=75037646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:26:0,71,947:0,71,255:26,0 chr1 75037647 . G . PASS END=75037653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 75037654 . T . PASS END=75037654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 75037655 . C . PASS END=75037739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1094:0,87,255:36,0 chr1 75037740 . A . PASS END=75037743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 75037744 . G . PASS END=75037772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1185:0,80,255:31,0 chr1 75037773 . C . PASS END=75037773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,928:0,48,255:26,0 chr1 75037774 . C . PASS END=75037789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1161:0,80,255:35,0 chr1 75037790 . T . PASS END=75037790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:35,0 chr1 75037791 . A . PASS END=75037814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:35,0 chr1 75037815 . T . PASS END=75037816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:67:35:0,67,1255:0,67,255:29,2 chr1 75037817 . T . PASS END=75037817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 75037818 . G . PASS END=75037823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 75037824 . G . PASS END=75038598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:32:0,80,1125:0,80,255:40,0 chr1 75038599 . T . PASS END=75038599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1145:0,55,255:28,0 chr1 75038600 . C . PASS END=75038604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:31,0 chr1 75038605 . T . PASS END=75038605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 75038606 . C . PASS END=75038622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:33,0 chr1 75038623 . T . PASS END=75038624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr1 75038625 . T . PASS END=75038645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1257:0,89,255:35,0 chr1 75038646 . A . PASS END=75038646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:32,0 chr1 75038647 . A . PASS END=75038648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:34,0 chr1 75038649 . A . PASS END=75038649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1262:0,78,255:33,0 chr1 75038650 . T . PASS END=75038692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:34,0 chr1 75038693 . T . PASS END=75038693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 75038694 . C . PASS END=75038713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:32,0 chr1 75038714 . C . PASS END=75038714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 75038715 . A . PASS END=75038717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 75038718 . A . PASS END=75038718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 75038719 . G . PASS END=75038725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr1 75038726 . T . PASS END=75038726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 75038727 . G . PASS END=75038731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1169:0,80,255:31,0 chr1 75038732 . T . PASS END=75038732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1016:0,76,255:28,0 chr1 75038733 . C . PASS END=75038770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,92,255:36,0 chr1 75038771 . C . PASS END=75038775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 75038776 . T . PASS END=75038779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 75038780 . T . PASS END=75038780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 75038781 . A . PASS END=75038786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 75038787 . A . PASS END=75038788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 75038789 . C . PASS END=75038790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 75038791 . A . PASS END=75038816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,963:0,78,255:26,0 chr1 75038817 . T . PASS END=75038819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 75038820 . G . PASS END=75038822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 75038823 . G . PASS END=75038826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 75038827 . G . PASS END=75038846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr1 75038847 . T . PASS END=75038852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 75038853 . C . PASS END=75038857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 75038858 . C . PASS END=75038862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 75038863 . T . PASS END=75038893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,890:0,62,255:26,0 chr1 75038894 . C . PASS END=75038895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 75038896 . G . PASS END=75038896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 75038897 . G . PASS END=75038899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 75038900 . G . PASS END=75038900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 75038901 . G . PASS END=75038908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,934:0,81,255:30,0 chr1 75038909 . T . PASS END=75038909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 75038910 . T . PASS END=75038915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1086:0,90,255:30,0 chr1 75038916 . T . PASS END=75038916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 75038917 . G . PASS END=75038921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 75038922 . C . PASS END=75038922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 75038923 . T . PASS END=75038927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,989:0,87,255:29,0 chr1 75038928 . T . PASS END=75038928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 75038929 . G . PASS END=75038932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 75038933 . A . PASS END=75038933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 75038934 . T . PASS END=75038934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 75038935 . T . PASS END=75038935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 75038936 . C . PASS END=75038951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 75038952 . T . PASS END=75038952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 75038953 . G . PASS END=75038953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 75038954 . G . PASS END=75038966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,77,255:26,0 chr1 75038967 . C . PASS END=75038987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:30,0 chr1 75038988 . T . PASS END=75038988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:28,0 chr1 75038989 . C . PASS END=75038989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 75038990 . C . PASS END=75038990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 75038991 . T . PASS END=75039175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:31:0,83,1260:0,83,255:40,0 chr1 75042579 . C . PASS END=75042620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:90:0,120,1800:0,193,255:40,0 chr1 75045088 . T . PASS END=75045096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1327:0,95,255:37,0 chr1 75045097 . A . PASS END=75045097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr1 75045098 . T . PASS END=75045098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1383:0,117,255:39,0 chr1 75045099 . A . PASS END=75045099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1224:0,78,255:37,0 chr1 75045100 . G . PASS END=75045198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:39:0,84,1377:0,84,255:40,0 chr1 75052068 . C . PASS END=75052086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:121:0,120,1800:0,255,255:40,0 chr1 75055298 . T . PASS END=75055547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:41:0,90,1378:0,90,255:40,0 chr1 75055548 . T . PASS END=75055584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,124,255:40,0 chr1 75055585 . T C, 47.82 PASS DP=51;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=3.499;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,21,0:0.420,0.000:50:10,8,0:19,13,0:47:83,0,50,714,984,1699:255,0,255:28,0:4.7823e+01,9.3449e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,17,6,15:17,12,13,8 chr1 75055586 . T . PASS END=75055622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:51:0,84,1735:0,84,255:40,0 chr1 75055623 . A . PASS END=75055723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,83,255:40,0 chr1 75055724 . A . PASS END=75055728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:29:0,69,1035:0,87,255:24,0 chr1 75055729 . G . PASS END=75055764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,576:0,51,255:19,0 chr1 75057586 . T C, 238.90 PASS DP=64;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,28,0:0,36,0:189:277,192,0,377,377,377:255,195,0:0,0:2.3890e+02,1.8890e+02,0.0000e+00,3.7367e+02,4.0844e+02,3.7668e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,29,35:0,0,37,27 chr1 75065379 . C . PASS END=75065403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,119,1604:0,119,255:40,0 chr1 75065404 . C . PASS END=75065440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,138,255:40,0 chr1 75065441 . C T, 49.48 PASS DP=70;MQ=250.00;MQRankSum=7.162;ReadPosRankSum=4.899;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,32,0:0.457,0.000:70:24,20,0:14,12,0:48:84,0,50,1128,1273,2401:255,0,255:36,0:4.9476e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,17,24,8:21,17,14,18 chr1 75065442 . G . PASS END=75065478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,186,255:40,0 chr1 75065479 . T . PASS END=75065615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:51:0,120,1800:0,120,255:40,0 chr1 75072285 . C . PASS END=75072285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1321:0,65,255:39,0 chr1 75072286 . A . PASS END=75072301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,111,1462:0,111,255:40,0 chr1 75072302 . T . PASS END=75072303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,120,1800:0,131,255:40,0 chr1 75072304 . C . PASS END=75072304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1492:0,77,255:40,0 chr1 75072305 . T . PASS END=75072586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:47:0,107,1800:0,107,255:40,0 chr1 75078307 . T . PASS END=75078323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:31,0 chr1 75078324 . T . PASS END=75078324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr1 75078325 . C . PASS END=75078432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:32:0,95,1119:0,95,255:40,0 chr1 75078433 . A . PASS END=75078433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1261:0,78,255:35,0 chr1 75078434 . G . PASS END=75078479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:38,0 chr1 75078480 . A . PASS END=75078487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:24,0 chr1 75078488 . A . PASS END=75078488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:19,0 chr1 75078489 . G . PASS END=75078493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,68,255:21,0 chr1 75086418 . C . PASS END=75086421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1075:0,93,255:33,0 chr1 75086422 . T . PASS END=75086422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1143:0,68,255:32,0 chr1 75086423 . T . PASS END=75086598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:33:0,81,1162:0,83,255:40,0 chr1 75088865 . T . PASS END=75088969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:55:0,120,1800:0,135,255:40,0 chr1 75097397 . C . PASS END=75097404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:33,0 chr1 75097405 . A . PASS END=75097405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:31,0 chr1 75097406 . A . PASS END=75097407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1252:0,105,255:35,0 chr1 75097408 . G C, 49.43 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=-0.579;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,16,0:0.457,0.000:35:10,12,0:9,4,0:48:84,0,50,519,635,1154:255,0,255:19,0:4.9427e+01,7.1187e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,6,11,5:10,9,9,7 chr1 75097409 . A . PASS END=75097425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1233:0,89,255:39,0 chr1 75097426 . G C, 49.99 PASS DP=43;MQ=250.00;MQRankSum=5.600;ReadPosRankSum=2.369;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,21,0:0.488,0.000:43:15,11,0:7,10,0:47:85,0,47,185,185,185:255,0,255:18,0:4.9993e+01,8.6978e-05,5.0000e+01,1.8476e+02,2.1953e+02,1.8777e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,7,13,8:12,10,11,10 chr1 75097427 . A . PASS END=75097463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,100,1566:0,100,255:40,0 chr1 75097464 . T . PASS END=75097612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,130,255:40,0 chr1 75100349 . C . PASS END=75100360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:95:0,120,1800:0,255,255:40,0 chr1 75101964 . C . PASS END=75102118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:35:0,84,1260:0,101,255:40,0 chr1 75102119 . C . PASS END=75102122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:37:0,75,1125:0,111,255:25,0 chr1 75107015 . C . PASS END=75107143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:32:0,90,1343:0,95,255:40,0 chr1 75108711 . C . PASS END=75108782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:60:0,120,1800:0,164,255:40,0 chr1 75112351 . C . PASS END=75112476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:95:59:0,95,1800:0,95,255:40,0 chr1 75114906 . C . PASS END=75114999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:59:0,120,1800:0,177,255:40,0 chr1 75139181 . C . PASS END=75139201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1080:0,83,255:33,0 chr1 75139202 . A . PASS END=75139202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:28,0 chr1 75139203 . T . PASS END=75139203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 75139996 . A . PASS END=75140012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,169,255:40,0 chr1 75171980 . T . PASS END=75171981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:42:0,87,1490:0,87,255:40,0 chr1 75171982 . A . PASS END=75171982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1411:0,71,255:39,0 chr1 75171983 . T . PASS END=75171986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:42:0,87,1468:0,87,255:40,0 chr1 75171987 . A . PASS END=75171987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1436:0,63,255:40,0 chr1 75171988 . G . PASS END=75172116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:44:0,85,1485:0,85,255:40,0 chr1 75172117 . C . PASS END=75172118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:78:46:0,78,1170:0,138,255:26,0 chr1 75172119 . G . PASS END=75172127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:36:0,81,1215:0,92,255:28,0 chr1 75172128 . T . PASS END=75172133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1055:0,71,255:26,0 chr1 75172134 . A . PASS END=75172135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 75172136 . T . PASS END=75172137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 75172138 . C . PASS END=75172141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 75172583 . C . PASS END=75172678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:40:0,87,1335:0,87,255:40,0 chr1 75172787 . T . PASS END=75172807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:102:0,120,1800:0,255,255:40,0 chr1 75172808 . C . PASS END=75172888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:94:0,120,1800:0,255,255:40,0 chr1 75175782 . C . PASS END=75175931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:33:0,83,1150:0,83,255:40,0 chr1 75180263 . T . PASS END=75180314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:87:0,120,1800:0,240,255:40,0 chr1 75184893 . C . PASS END=75185022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,109,1566:0,109,255:40,0 chr1 75185023 . A . PASS END=75185023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1662:0,78,255:39,0 chr1 75185024 . G . PASS END=75185056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:36:0,96,1440:0,108,255:40,0 chr1 75188802 . C . PASS END=75188954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:85:35:0,85,1263:0,85,255:40,0 chr1 75190395 . C . PASS END=75190414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,140,255:40,0 chr1 75190415 . G . PASS END=75190451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,152,255:40,0 chr1 75190452 . C T, 242.63 PASS DP=65;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,65,0:1.000,0.000:65:0,30,0:0,35,0:193:280,196,0,2499,196,2499:255,198,0:0,0:2.4263e+02,1.9263e+02,0.0000e+00,4.5000e+02,2.2740e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,34:0,0,36,29 chr1 75190453 . C . PASS END=75190489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:56:0,120,1800:0,142,255:40,0 chr1 75190490 . T . PASS END=75190505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,114,1666:0,114,255:40,0 chr1 75198929 . A . PASS END=75199066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:29:0,87,1062:0,87,255:40,0 chr1 75199067 . A . PASS END=75199068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 75199069 . C . PASS END=75199082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1260:0,87,255:29,0 chr1 75199083 . G . PASS END=75199094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,71,255:25,0 chr1 75199095 . T . PASS END=75199095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 75199096 . T . PASS END=75199097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 75199098 . A . PASS END=75199102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 75202226 . G . PASS END=75202306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:64:0,120,1800:0,159,255:40,0 chr1 75204374 . A . PASS END=75204472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:41:0,107,1446:0,107,255:40,0 chr1 75214435 . C . PASS END=75214506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,190,255:40,0 chr1 75217976 . G . PASS END=75218109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:48:0,120,1800:0,144,255:40,2 chr1 75229578 . G . PASS END=75229797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:59:0,120,1800:0,150,255:40,2 chr1 75596400 . A . PASS END=75596417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,139,255:40,0 chr1 75602288 . T . PASS END=75602300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 75602301 . T . PASS END=75602346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1149:0,80,255:33,0 chr1 75602347 . T . PASS END=75602374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1126:0,85,255:34,0 chr1 75602785 . G . PASS END=75602785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 75602786 . T . PASS END=75602786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 75602787 . G . PASS END=75602789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 75602790 . C . PASS END=75602790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 75602791 . C . PASS END=75602791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 75602792 . C . PASS END=75602792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 75602793 . C . PASS END=75602797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:24,0 chr1 75602798 . G . PASS END=75602798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 75602799 . A . PASS END=75602806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 75602807 . A . PASS END=75602807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,858:0,50,255:25,0 chr1 75602808 . C . PASS END=75602811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 75602812 . G . PASS END=75602817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 75602818 . T . PASS END=75602818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 75602819 . G . PASS END=75602819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 75602820 . C . PASS END=75602820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 75602821 . T . PASS END=75602822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 75602823 . C . PASS END=75602823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:30,0 chr1 75602824 . T . PASS END=75602834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:34,0 chr1 75602835 . G . PASS END=75602835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 75602836 . C . PASS END=75602852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:36,0 chr1 75602853 . G . PASS END=75602853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:32,0 chr1 75602854 . C . PASS END=75602907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,81,255:36,0 chr1 75602908 . A . PASS END=75602908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:26,0 chr1 75602909 . G . PASS END=75602912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:30,0 chr1 75602913 . C . PASS END=75602913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:29,0 chr1 75602914 . G . PASS END=75602919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1208:0,83,255:29,0 chr1 75602920 . G . PASS END=75602920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 75602921 . A . PASS END=75602923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 75602924 . T . PASS END=75602924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:25,0 chr1 75602925 . C . PASS END=75602927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 75602928 . G . PASS END=75602929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 75602930 . A . PASS END=75602937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,950:0,84,255:28,0 chr1 75602938 . C . PASS END=75602942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,895:0,67,255:26,0 chr1 75602943 . C . PASS END=75602943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:19,0 chr1 75602944 . A . PASS END=75602946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:21,0 chr1 75606670 . G . PASS END=75606791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:90:40:0,90,1457:0,90,255:40,0 chr1 75608803 . A . PASS END=75608835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:32:0,95,1210:0,95,255:40,0 chr1 75608836 . A . PASS END=75608836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:55:50:0,55,1411:0,55,255:40,0 chr1 75608837 . C . PASS END=75609011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:81:30:0,81,1178:0,81,255:40,1 chr1 75609012 . A . PASS END=75609016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr1 75609017 . G . PASS END=75609017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 75609018 . A . PASS END=75609018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 75609019 . A . PASS END=75609019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,970:0,35,255:23,0 chr1 75609020 . A . PASS END=75609023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:24,0 chr1 75609530 . G . PASS END=75609633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,111,1665:0,124,255:40,0 chr1 75614272 . G . PASS END=75614331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:56:0,120,1800:0,125,255:40,0 chr1 75614332 . G . PASS END=75614357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:84:69:0,84,1260:0,190,255:40,0 chr1 75614358 . T . PASS END=75614359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:60:66:0,60,900:0,198,255:20,0 chr1 75614360 . T . PASS END=75614361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:51:66:0,51,765:0,165,255:18,0 chr1 75614362 . A . PASS END=75614367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:30:54:0,30,450:0,162,255:12,0 chr1 75622578 . G . PASS END=75622578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr1 75622579 . T . PASS END=75622615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:34:0,102,1294:0,102,255:40,0 chr1 75622616 . C T, 47.89 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=2.861;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:20,11,0:6,8,0:47:83,0,50,679,930,1609:255,0,255:25,0:4.7888e+01,9.2414e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,11,8:13,13,13,6 chr1 75622617 . G . PASS END=75622653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,108,1723:0,108,255:40,0 chr1 75622654 . C . PASS END=75622759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,94,255:40,0 chr1 75622760 . T . PASS END=75622761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:24,0 chr1 75626504 . C . PASS END=75626580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,109,1701:0,109,255:40,0 chr1 75665003 . A . PASS END=75665130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:49:0,120,1800:0,128,255:40,0 chr1 75669412 . C . PASS END=75669518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:44:0,106,1594:0,106,255:40,0 chr1 75672292 . C . PASS END=75672338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,194,255:40,0 chr1 75672339 . C . PASS END=75672375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,204,255:40,0 chr1 75672376 . A G, 47.72 PASS DP=67;MQ=250.00;MQRankSum=6.935;ReadPosRankSum=4.240;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,28,0:0.418,0.000:67:19,13,0:20,15,0:47:82,0,50,1001,1350,2352:255,0,255:39,0:4.7723e+01,9.5003e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,24,12,16:19,20,13,15 chr1 75672377 . G . PASS END=75672404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,167,255:40,0 chr1 75677153 . A . PASS END=75677237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:72:0,120,1800:0,189,255:40,0 chr1 75679390 . C . PASS END=75679478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:54:0,120,1800:0,131,255:40,0 chr1 75679604 . C . PASS END=75679674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:57:0,120,1800:0,138,255:40,0 chr1 75680290 . T . PASS END=75680363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,142,255:40,0 chr1 75681439 . C . PASS END=75681473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:82:0,120,1800:0,215,255:40,0 chr1 75681474 . C . PASS END=75681510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:87:0,120,1800:0,229,255:40,0 chr1 75681511 . T C, 298.43 PASS DP=84;MQ=249.54;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,84,0:1.000,0.000:84:0,47,0:0,37,0:248:336,251,0,3151,251,3151:255,255,0:0,0:2.9843e+02,2.4843e+02,0.0000e+00,4.5000e+02,2.8320e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,59:0,0,50,34 chr1 75681512 . T . PASS END=75681542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,158,255:40,0 chr1 75683551 . G . PASS END=75683645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,4:115:99:88:0,120,1800:0,251,255:40,0 chr1 75684175 . C . PASS END=75684411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:34:0,84,1256:0,88,255:40,0 chr1 75684412 . T . PASS END=75684412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1056:0,57,255:28,0 chr1 75684413 . T . PASS END=75684417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 75684418 . A . PASS END=75684437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:26:0,67,938:0,67,255:26,0 chr1 75684942 . C . PASS END=75685029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:33:0,85,1122:0,85,255:40,0 chr1 75685485 . A . PASS END=75685577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:49:0,120,1800:0,131,255:40,0 chr1 75688046 . T . PASS END=75688113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:54:0,120,1800:0,129,255:40,0 chr1 75688114 . G . PASS END=75688145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:41:0,81,1215:0,102,255:40,0 chr1 75693411 . T . PASS END=75693542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:35:0,90,1350:0,103,255:40,0 chr1 75699671 . C . PASS END=75699783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:49:0,120,1800:0,147,255:40,0 chr1 75702672 . A . PASS END=75702755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:54:0,120,1800:0,162,255:40,0 chr1 75704198 . T . PASS END=75704321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,110,1665:0,110,255:40,0 chr1 75707686 . A . PASS END=75707746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:54:0,120,1800:0,145,255:40,0 chr1 75708571 . C . PASS END=75708696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,108,1451:0,110,255:40,0 chr1 75716895 . C . PASS END=75716924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1119:0,87,255:40,0 chr1 75716925 . C T, 173.41 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,32,0:0,10,0:123:211,126,0,1620,126,1620:255,126,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,13:0,0,29,13 chr1 75716926 . A . PASS END=75716962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,108,1620:0,116,255:40,0 chr1 75716963 . A . PASS END=75716979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1380:0,98,255:37,0 chr1 75740643 . T . PASS END=75740727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:36:0,96,1399:0,96,255:40,0 chr1 75766297 . C . PASS END=75766370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,153,255:40,0 chr1 75805267 . C . PASS END=75805315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,145,255:40,0 chr1 75862268 . C . PASS END=75862306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,156,255:40,0 chr1 76007120 . C . PASS END=76007132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,129,255:40,0 chr1 76081538 . C . PASS END=76081546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,729:0,57,255:19,0 chr1 76081547 . T . PASS END=76081564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 76081565 . T . PASS END=76081571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 76190070 . C . PASS END=76190070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 76190098 . C . PASS END=76190098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 76190131 . G . PASS END=76190131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 76190169 . A . LowGQ END=76190169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,316:18,0,255:8,0 chr1 76190304 . C . PASS END=76190304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:31,0 chr1 76190381 . A . PASS END=76190381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1280:0,94,255:34,0 chr1 76190395 . G . PASS END=76190395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 76190423 . A . PASS END=76190423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 76190444 . T . PASS END=76190444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,117,1755:0,144,255:39,0 chr1 76190456 . C . PASS END=76190456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1426:0,101,255:37,0 chr1 76190467 . G . PASS END=76190467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 76190473 . A . PASS END=76190502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,94,255:37,0 chr1 76190504 . T . PASS END=76190504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 76194074 . T . PASS END=76194091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,120,1800:0,153,255:40,0 chr1 76194092 . A . PASS END=76194174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,138,255:40,0 chr1 76198328 . G . PASS END=76198398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,123,255:40,0 chr1 76198399 . G . PASS END=76198428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,167,255:40,0 chr1 76198523 . T . PASS END=76198607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,156,255:40,0 chr1 76198609 . T . PASS END=76198609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 76198736 . A . PASS END=76198747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,164,255:40,0 chr1 76198748 . G . PASS END=76198784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,157,255:40,0 chr1 76198785 . G A, 222.72 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,27,0:0,32,0:173:260,176,0,2131,176,2131:255,177,0:0,0:2.2272e+02,1.7272e+02,0.0000e+00,4.5000e+02,2.0749e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,27:0,0,34,25 chr1 76198786 . T . PASS END=76198822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,129,255:40,0 chr1 76198823 . A . PASS END=76198834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,114,1710:0,123,255:40,0 chr1 76199203 . G . PASS END=76199203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 76199205 . T . PASS END=76199205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 76199211 . A . PASS END=76199307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,159,255:40,0 chr1 76199308 . T . PASS END=76199314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,164,255:40,0 chr1 76200457 . T . PASS END=76200457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr1 76200462 . A . PASS END=76200462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 76200471 . G . PASS END=76200471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 76200473 . T . PASS END=76200473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 76200476 . C . PASS END=76200556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:58:0,120,1800:0,157,255:40,0 chr1 76200558 . T . PASS END=76200558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 76200563 . A . PASS END=76200563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 76205656 . A . PASS END=76205656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:27,0 chr1 76205663 . A . PASS END=76205680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:37:0,108,1620:0,111,255:40,0 chr1 76205681 . A . PASS END=76205798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:57:0,120,1800:0,136,255:40,0 chr1 76205800 . G . PASS END=76205800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 76211473 . G . PASS END=76211473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 76211491 . G . PASS END=76211601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:45:0,108,1620:0,122,255:40,0 chr1 76211605 . G . PASS END=76211605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:46:0,93,1395:0,138,255:31,0 chr1 76215091 . A . PASS END=76215091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 76215102 . A . PASS END=76215245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:93:31:0,93,1148:0,93,255:40,0 chr1 76216126 . A . PASS END=76216126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 76216132 . C . PASS END=76216132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 76216134 . A . PASS END=76216134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 76216136 . G . PASS END=76216231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,108,1620:0,123,255:40,0 chr1 76226801 . T . PASS END=76226801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 76226805 . A . PASS END=76226805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1466:0,107,255:38,0 chr1 76226807 . C . PASS END=76226984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:40:0,107,1347:0,107,255:40,0 chr1 76226985 . T . PASS END=76227021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:37:0,96,1440:0,111,255:40,0 chr1 76227022 . A G, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,19,0:0,16,0:102:190,105,0,1349,105,1349:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,23:0,0,16,19 chr1 76227023 . G . PASS END=76227029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1249:0,89,255:33,0 chr1 76227030 . T . PASS END=76227030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:28,0 chr1 76227031 . A . PASS END=76227044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:32:0,80,1117:0,80,255:30,0 chr1 76227045 . A . PASS END=76227045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 76227046 . A . PASS END=76227047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 76227048 . T . PASS END=76227048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,912:0,40,255:27,0 chr1 76227049 . C . PASS END=76227055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 76227056 . G . PASS END=76227056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 76227058 . A . PASS END=76227058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1080:0,77,255:23,0 chr1 76228375 . A . PASS END=76228448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:76:0,120,1800:0,227,255:40,0 chr1 76228492 . T . PASS END=76228492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:100:0,120,1800:0,255,255:40,0 chr1 76228505 . G . PASS END=76228505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr1 76228581 . T . PASS END=76228581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 76228625 . G . PASS END=76228625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 76228732 . C . PASS END=76228732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 76228765 . C . PASS END=76228765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,178,255:40,0 chr1 76228875 . T . PASS END=76228875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 76229271 . T . PASS END=76229271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 76229274 . T . PASS END=76229274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 76234862 . G . PASS END=76234885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:12,0 chr1 76234886 . A G, 83.12 PASS DP=12;MQ=249.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,4,0:0,8,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,7:0,0,7,5 chr1 76234887 . C . PASS END=76234898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 76234899 . T . PASS END=76234904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 76234905 . G . PASS END=76234906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:13:10:0,13,270:0,13,255:6,0 chr1 76251957 . A . PASS END=76251959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:45:0,96,1576:0,96,255:40,0 chr1 76253182 . G . PASS END=76253289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:45:0,96,1440:0,118,255:40,0 chr1 76254844 . G . PASS END=76254844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 76254845 . A . PASS END=76254845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 76254846 . A . PASS END=76254846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 76254847 . T . PASS END=76254847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 76254848 . A . PASS END=76254848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 76254849 . C . PASS END=76254849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 76254850 . T . PASS END=76254850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 76254851 . G . PASS END=76255041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:32:0,84,1260:0,95,255:40,0 chr1 76255637 . A . PASS END=76255786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:93:32:0,93,1395:0,96,255:40,0 chr1 76256970 . G . PASS END=76257022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:94:0,120,1800:0,203,255:40,2 chr1 76257146 . G . PASS END=76257256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:42:0,99,1551:0,99,255:40,0 chr1 76257866 . A . PASS END=76257867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:25,0 chr1 76257868 . C . PASS END=76257891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:33:0,82,1149:0,82,255:40,0 chr1 76257892 . A T, 178.50 PASS DP=44;MQ=248.27;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,22,0:0,22,0:128:216,132,0,1631,132,1631:255,132,0:0,0:1.7850e+02,1.2850e+02,0.0000e+00,4.5000e+02,1.6327e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,15:0,0,25,19 chr1 76257893 . A . PASS END=76257929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,104,1800:0,104,255:40,0 chr1 76257930 . T . PASS END=76257973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,99,1485:0,117,255:40,0 chr1 76257974 . A . PASS END=76257974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1402:0,68,255:31,0 chr1 76257975 . A . PASS END=76257991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1170:0,81,255:33,0 chr1 76259769 . T . PASS END=76259918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:30:0,87,1111:0,90,255:40,0 chr1 76260195 . G . PASS END=76260335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:96:42:0,96,1440:0,126,255:40,0 chr1 76262671 . A . PASS END=76262723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:19,0 chr1 76262724 . G . PASS END=76262769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 76262770 . G . PASS END=76262822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:19,0 chr1 76262823 . C . PASS END=76262823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 76262824 . A . PASS END=76262875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,615:0,48,255:19,0 chr1 76262876 . G . PASS END=76262914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 76269416 . G . PASS END=76269595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:30:0,81,1215:0,90,255:40,0 chr1 76269596 . C . PASS END=76269598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:26,0 chr1 76272666 . C . PASS END=76272669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 76272670 . A . PASS END=76272675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 76272676 . A . PASS END=76272676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 76272677 . T . PASS END=76272679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 76272680 . G . PASS END=76272680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 76272681 . C . PASS END=76272681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 76272682 . G . PASS END=76272682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 76272683 . A . PASS END=76272683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 76272684 . T . PASS END=76272826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:27:0,81,1016:0,81,255:40,0 chr1 76276382 . G . PASS END=76276390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:40:0,96,1435:0,96,255:40,0 chr1 76276391 . A . PASS END=76276492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,102,1487:0,102,255:40,0 chr1 76280706 . A . PASS END=76280821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:41:0,99,1484:0,99,255:40,0 chr1 76282058 . G . PASS END=76282231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:42:0,87,1305:0,96,255:40,0 chr1 76288094 . G . PASS END=76288096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 76288097 . T . PASS END=76288108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,825:0,64,255:26,0 chr1 76288109 . C . PASS END=76288111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 76288112 . T . PASS END=76288112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 76288113 . G . PASS END=76288248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:29:0,87,1086:0,87,255:40,0 chr1 76288249 . T . PASS END=76288249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:29,0 chr1 76288250 . T . PASS END=76288256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,88,255:30,0 chr1 76288257 . C . PASS END=76288266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,71,255:26,0 chr1 76313894 . T . PASS END=76313961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:102:0,120,1800:0,255,255:40,0 chr1 76333199 . G . PASS END=76333200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 76333201 . C . PASS END=76333273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:83:0,120,1800:0,231,255:40,0 chr1 76342621 . A . PASS END=76342685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:71:0,120,1800:0,198,255:40,0 chr1 76343834 . G . PASS END=76344003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:93:42:0,93,1419:0,93,255:40,0 chr1 76344677 . G . PASS END=76344811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:28:0,81,1025:0,84,255:40,0 chr1 76344812 . A . PASS END=76344812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:24,0 chr1 76344813 . G . PASS END=76344813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 76345735 . A . PASS END=76345838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:74:0,120,1800:0,212,255:40,0 chr1 76346931 . G . PASS END=76346970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,124,255:40,0 chr1 76346971 . C . PASS END=76347055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:50:0,120,1800:0,134,255:40,0 chr1 76349306 . T . PASS END=76349506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:50:0,120,1800:0,125,255:40,0 chr1 76354936 . G . PASS END=76355054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:91:51:0,91,1710:0,91,255:40,0 chr1 76356381 . A . PASS END=76356509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,120,1800:0,129,255:40,0 chr1 76363592 . G . PASS END=76363766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:48:0,120,1800:0,143,255:40,0 chr1 76365303 . G . PASS END=76365391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,140,255:40,0 chr1 76378381 . C . PASS END=76378409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:29:0,80,1155:0,80,255:40,0 chr1 76378410 . A . PASS END=76378572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:99:45:0,105,1685:0,105,255:40,0 chr1 76384637 . T . PASS END=76384843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,99,1485:0,106,255:40,0 chr1 76387765 . C . PASS END=76387766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,952:0,87,255:29,0 chr1 76387767 . T . PASS END=76387767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1031:0,38,255:29,0 chr1 76387768 . T . PASS END=76387771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1095:0,93,255:33,0 chr1 76387772 . T . PASS END=76387772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:32,0 chr1 76387773 . C . PASS END=76388024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:33:0,81,1181:0,89,255:40,0 chr1 76388025 . A . PASS END=76388042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:66:25:0,66,984:0,67,255:25,0 chr1 76388043 . T . PASS END=76388043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 76388044 . T . PASS END=76388044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 76397576 . C . PASS END=76397577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 76397578 . C . PASS END=76397976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:81:27:0,81,1002:0,81,255:40,0 chr1 76540552 . A . PASS END=76540558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1000:0,78,255:26,0 chr1 76540559 . G . PASS END=76540559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 76540560 . C . PASS END=76540560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 76540561 . A . PASS END=76540561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 76540562 . T . PASS END=76540568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 76540569 . G . PASS END=76540569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 76760299 . A . PASS END=76760332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:88:0,120,1800:0,240,255:40,0 chr1 76760333 . A . PASS END=76760370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:89:0,120,1800:0,179,255:40,0 chr1 76775244 . A . PASS END=76775297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,159,255:40,0 chr1 76779490 . A . PASS END=76779490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 76779491 . G . PASS END=76779491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 76779492 . A . PASS END=76779684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:29:0,83,967:0,83,255:40,0 chr1 76877693 . C . PASS END=76878102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:29:0,81,1108:0,87,255:40,0 chr1 76878682 . A . PASS END=76878688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:111:0,120,1800:0,255,255:40,0 chr1 77042531 . T . PASS END=77042554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:53:0,120,1800:0,147,255:40,0 chr1 77093137 . A . PASS END=77093142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1132:0,99,255:34,0 chr1 77093143 . G . PASS END=77093179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:35:0,94,1260:0,94,255:40,0 chr1 77093180 . C A, 50.00 PASS DP=54;MQ=249.80;MQRankSum=5.825;ReadPosRankSum=1.050;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,31,0:0.574,0.000:54:12,15,0:11,16,0:48:85,0,48,1093,815,1907:255,0,255:22,0:5.0000e+01,7.6882e-05,5.1118e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,15,15,16:9,14,21,10 chr1 77093181 . T . PASS END=77093217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,111,1794:0,111,255:40,0 chr1 77093218 . C . PASS END=77093244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:37:0,84,1260:0,111,255:40,0 chr1 77094305 . G . PASS END=77094305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 77094306 . A . PASS END=77094306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 77094307 . C . PASS END=77094307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:28,0 chr1 77094308 . A . PASS END=77094308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 77094309 . G . PASS END=77094474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:83:33:0,83,1180:0,83,255:40,0 chr1 77094475 . A . PASS END=77094475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1050:0,69,255:28,0 chr1 77094476 . C . PASS END=77094482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 77094483 . T . PASS END=77094491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1047:0,74,255:25,0 chr1 77099813 . A . PASS END=77099876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,102,1530:0,105,255:40,0 chr1 77333361 . A . PASS END=77333375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1189:0,102,255:36,0 chr1 77334182 . C . PASS END=77334196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr1 77334197 . G . PASS END=77334197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 77334198 . T . PASS END=77334206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 77334207 . C . PASS END=77334219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 77334220 . G . PASS END=77334224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 77334225 . C . PASS END=77334233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 77334234 . T . PASS END=77334234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr1 77334235 . G . PASS END=77334238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 77334239 . G . PASS END=77334257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 77334258 . G . PASS END=77334258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr1 77334259 . C . PASS END=77334259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 77334260 . C . PASS END=77334260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 77334261 . A . PASS END=77334273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 77334274 . C . PASS END=77334274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 77334275 . C . PASS END=77334275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 77334276 . C . LowGQ END=77334278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,543:0,0,255:15,1 chr1 77334279 . A . PASS END=77334279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:19:18:0,19,602:0,19,255:16,1 chr1 77334280 . G . LowGQ END=77334280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,541:1,0,255:16,0 chr1 77334281 . C . PASS END=77334281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr1 77334282 . A . PASS END=77334283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 77334284 . C . PASS END=77334284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 77334285 . A . PASS END=77334302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr1 77334303 . A . PASS END=77334303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 77334304 . G . PASS END=77334322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:19,0 chr1 77334323 . A . PASS END=77334323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr1 77334324 . C . PASS END=77334329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr1 77334330 . G . PASS END=77334335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr1 77334336 . A . PASS END=77334336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr1 77334337 . G . PASS END=77334338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 77334339 . C . PASS END=77334339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 77334340 . G . PASS END=77334346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 77334347 . G . PASS END=77334348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 77334349 . G . PASS END=77334350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 77334351 . G . PASS END=77334394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,592:0,40,255:19,0 chr1 77334395 . C . PASS END=77334395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 77334396 . T . PASS END=77334397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 77334398 . G . PASS END=77334398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 77334399 . A . PASS END=77334427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,651:0,41,255:19,0 chr1 77509889 . C . PASS END=77509906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:17,0 chr1 77509907 . A . PASS END=77509907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 77509908 . G . PASS END=77509920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 77509921 . G . PASS END=77509957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 77509958 . G . PASS END=77509964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 77509965 . A . PASS END=77509965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 77509966 . G . PASS END=77509991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1202:0,84,255:31,0 chr1 77509992 . G . PASS END=77509992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 77509993 . C . PASS END=77510298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1215:0,92,255:40,0 chr1 77515943 . G . PASS END=77516050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:35:0,105,1259:0,105,255:40,0 chr1 77528660 . G . PASS END=77528660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 77528661 . G . PASS END=77528661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 77528662 . A . PASS END=77528663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 77528664 . C . PASS END=77528667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr1 77528668 . A . PASS END=77528668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr1 77528669 . T . PASS END=77528670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 77528671 . A . PASS END=77528671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 77528672 . C . PASS END=77528891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:83:30:0,83,1172:0,83,255:40,1 chr1 77558059 . C . PASS END=77558175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:57:0,120,1800:0,140,255:40,0 chr1 77587960 . C . PASS END=77588044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:70:0,120,1800:0,194,255:40,0 chr1 77620121 . T . PASS END=77620306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:84:35:0,84,1350:0,84,255:40,0 chr1 77626980 . A . PASS END=77627058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:72:0,120,1800:0,169,255:40,0 chr1 77627059 . A . PASS END=77627090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:69:0,120,1800:0,183,255:40,0 chr1 77627279 . C . PASS END=77627396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:41:0,105,1575:0,118,255:40,0 chr1 77629531 . C . PASS END=77629627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:74:0,120,1800:0,218,255:40,0 chr1 77632404 . C . PASS END=77632515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:84:43:0,84,1260:0,114,255:40,0 chr1 77634945 . C . PASS END=77634945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 77634946 . T . PASS END=77634946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 77634947 . C . PASS END=77634947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 77634948 . G A, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,15,0:0,15,0:87:175,90,0,1147,90,1147:255,93,0:0,0:1.3729e+02,8.7286e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,17:0,0,14,16 chr1 77634949 . T . PASS END=77634949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:29,0 chr1 77634950 . A . PASS END=77634950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 77634951 . A . PASS END=77634951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 77634952 . C . PASS END=77634985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:32:0,96,1188:0,96,255:40,0 chr1 77634986 . C . PASS END=77635080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:37:0,84,1260:0,111,255:40,0 chr1 77672325 . C . PASS END=77672416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:40:0,120,1506:0,120,255:40,0 chr1 77676121 . C . PASS END=77676175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:77:0,120,1800:0,222,255:40,0 chr1 77684995 . C . PASS END=77685019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr1 77685020 . C . PASS END=77685022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 77685023 . A . PASS END=77685025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 77685026 . G . PASS END=77685028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 77685029 . A . PASS END=77685035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 77685036 . A . PASS END=77685040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:15,0 chr1 77685041 . G . PASS END=77685087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 77747999 . A . PASS END=77748058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,864:0,62,255:26,0 chr1 77752626 . A . PASS END=77752634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 77752635 . A . PASS END=77752635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr1 77752636 . A . PASS END=77752639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:32:0,90,1350:0,96,255:36,0 chr1 77752640 . A . PASS END=77752640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:34,0 chr1 77752641 . C . PASS END=77752812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:92:36:0,92,1300:0,92,255:40,0 chr1 77759478 . T . PASS END=77759479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 77759480 . A . PASS END=77759480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 77759481 . T . PASS END=77759492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,992:0,75,255:26,0 chr1 77759493 . C . PASS END=77759494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 77759495 . A . PASS END=77759495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 77759496 . A . PASS END=77759500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,820:0,80,255:28,0 chr1 77759501 . C . PASS END=77759501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 77759502 . C . PASS END=77759645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,995:0,84,255:40,0 chr1 77763244 . G . PASS END=77763413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:53:0,120,1800:0,143,255:40,0 chr1 77763519 . G . PASS END=77763541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,145,255:40,0 chr1 77763542 . G A, 236.14 PASS DP=63;MQ=249.25;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,32,0:0,31,0:186:274,189,0,2371,189,2371:255,192,0:0,0:2.3614e+02,1.8614e+02,0.0000e+00,4.5000e+02,2.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,31:0,0,25,38 chr1 77763543 . C . PASS END=77763579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,137,255:40,0 chr1 77763580 . T . PASS END=77763632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:52:0,120,1800:0,156,255:40,1 chr1 77806062 . A . PASS END=77806067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr1 77806068 . A . PASS END=77806068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 77806069 . C . PASS END=77806253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:86:32:0,86,1241:0,86,255:40,0 chr1 77876666 . T . PASS END=77876756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:36:0,90,1106:0,90,255:40,0 chr1 77883324 . G . PASS END=77883400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:48:0,120,1800:0,131,255:40,0 chr1 77949002 . G . PASS END=77949044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,183,255:40,0 chr1 77951993 . G . PASS END=77952037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:82:0,120,1800:0,197,255:40,0 chr1 77968341 . G . PASS END=77968363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,154,255:40,0 chr1 77984249 . G . PASS END=77984250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 77984251 . G . PASS END=77984412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:29:0,81,1215:0,87,255:40,0 chr1 77987512 . G . PASS END=77987512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 77987513 . G . PASS END=77987513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 77987514 . C . PASS END=77987514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 77987515 . A . PASS END=77987515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 77987516 . T . PASS END=77987517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 77987518 . G . PASS END=77987536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:19,0 chr1 77987537 . A . PASS END=77987559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:26,0 chr1 77987560 . G . PASS END=77987563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 77987564 . C . PASS END=77987564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 77987565 . C . PASS END=77987605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:30,0 chr1 77987606 . A . PASS END=77987607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 77987608 . G . PASS END=77987608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 77987609 . G . PASS END=77987624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,71,255:26,0 chr1 77987625 . C . PASS END=77987628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 78001532 . A . PASS END=78001538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:16,0 chr1 78001539 . A . PASS END=78001539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 78001540 . C . PASS END=78001545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,653:0,54,255:18,0 chr1 78001546 . G . PASS END=78001547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 78001548 . T . PASS END=78001548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 78001549 . G . PASS END=78001549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 78001550 . G . PASS END=78001552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 78001553 . A . PASS END=78001553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:16,0 chr1 78001554 . T . PASS END=78001563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,621:0,41,255:19,0 chr1 78001564 . C . PASS END=78001583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 78001584 . C . PASS END=78001584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 78001585 . C . PASS END=78001600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,845:0,69,255:25,0 chr1 78001601 . A . PASS END=78001601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,750:0,58,255:23,0 chr1 78001602 . G . PASS END=78001606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,978:0,67,255:26,0 chr1 78001607 . C . PASS END=78001607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 78001608 . G . PASS END=78001608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 78001609 . G . PASS END=78001611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 78001612 . C . PASS END=78001613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:26,0 chr1 78001614 . G . PASS END=78001614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 78001615 . C . PASS END=78001615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 78001616 . C . PASS END=78001623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 78001624 . G . PASS END=78001624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr1 78001625 . G . PASS END=78001629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:31,0 chr1 78001630 . C . PASS END=78001630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 78001631 . A . PASS END=78001641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1149:0,80,255:35,0 chr1 78001642 . C . PASS END=78001642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:31,0 chr1 78001643 . A . PASS END=78001647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 78001648 . C . PASS END=78001648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 78001649 . A . PASS END=78001655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1037:0,85,255:33,0 chr1 78001656 . T . PASS END=78001656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:33,0 chr1 78001657 . A . PASS END=78001658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 78001659 . A . PASS END=78001659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1023:0,52,255:27,0 chr1 78001660 . A . PASS END=78001673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1210:0,86,255:31,0 chr1 78001674 . C . PASS END=78001674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1086:0,65,255:30,0 chr1 78001675 . G . PASS END=78001677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 78001678 . C . PASS END=78001679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 78001680 . T . PASS END=78001680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 78001681 . C . PASS END=78001682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 78001683 . C . PASS END=78001683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 78001684 . C . PASS END=78001684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 78001685 . G . PASS END=78001698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1088:0,90,255:30,0 chr1 78001699 . C . PASS END=78001699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 78001700 . G . PASS END=78001702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 78001703 . A . PASS END=78001703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:28,0 chr1 78001704 . C . PASS END=78001711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 78001712 . C . PASS END=78001718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr1 78001719 . A . PASS END=78001719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:18,0 chr1 78001720 . C . PASS END=78001723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:26:0,51,765:0,65,255:17,0 chr1 78024287 . A . PASS END=78024296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:44:0,81,1215:0,132,255:32,0 chr1 78024297 . A . PASS END=78024321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:63:46:0,63,945:0,129,255:26,0 chr1 78024322 . T . PASS END=78024330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:51:54:0,51,765:0,124,255:19,0 chr1 78024331 . C . PASS END=78024334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:36:53:0,36,540:0,143,255:12,0 chr1 78024335 . G . PASS END=78024337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:21:53:0,21,315:0,143,255:8,0 chr1 78024338 . A . LowGQ END=78024344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:53,1:54:0:49:0,0,0:0,109,255:1,0 chr1 78024345 . C CTAT, 188.44 PASS DP=49;MQ=249.36;FractionInformativeReads=0.959 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,22,0:0,25,0:138:220,141,0,2096,141,2096:255,0,72:0,65:1.8844e+02,1.3844e+02,0.0000e+00,4.5000e+02,1.7325e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,27,20:0,0,24,23 chr1 78024346 . T . LowGQ END=78024346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,43:48:0:48:0,0,0:255,0,50:37,1 chr1 78024347 . A . PASS END=78024349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:47:0,111,1665:0,113,255:37,0 chr1 78024350 . T . LowGQ END=78024350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:0:47:0,0,1437:14,0,255:36,0 chr1 78024351 . T . PASS END=78024351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,108,1620:0,138,255:36,0 chr1 78024352 . C . PASS END=78024352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1551:0,58,255:36,0 chr1 78024353 . T . PASS END=78024355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1574:0,94,255:36,0 chr1 78031325 . T . PASS END=78031469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:37:0,104,1396:0,104,255:40,0 chr1 78031766 . C . PASS END=78031866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:35:0,88,1248:0,88,255:40,0 chr1 78034017 . C . PASS END=78034033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,158,255:40,0 chr1 78034034 . G . PASS END=78034106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:78:0,120,1800:0,182,255:40,0 chr1 78034107 . A . PASS END=78034137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:81:62:0,81,1215:0,91,255:40,0 chr1 78034138 . A . PASS END=78034140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:60:59:0,60,900:0,136,255:23,0 chr1 78034141 . C . PASS END=78034143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:48:59:0,48,720:0,83,255:15,0 chr1 78034144 . T . PASS END=78034144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:39:58:0,39,585:0,174,255:13,0 chr1 78034145 . C . PASS END=78034145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:29:54:0,29,1573:0,29,255:10,0 chr1 78034146 . G . PASS END=78034149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:30:54:0,30,450:0,62,255:10,0 chr1 78034150 . T . PASS END=78034150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,8:54:7:54:0,7,1322:0,7,255:7,0 chr1 78034151 . C . PASS END=78034151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:33:54:0,33,495:0,68,255:8,0 chr1 78041753 . T . PASS END=78041905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:90:39:0,90,1350:0,101,255:40,0 chr1 78044459 . C . PASS END=78044554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:91:35:0,91,1189:0,91,255:40,0 chr1 78045212 . C . PASS END=78045313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,112,1404:0,112,255:40,0 chr1 78046683 . C . PASS END=78046754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,170,255:40,0 chr1 78047461 . C . PASS END=78047576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:50:0,120,1800:0,140,255:40,0 chr1 78047664 . C . PASS END=78047811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:40:0,96,1440:0,120,255:40,0 chr1 78050202 . C . PASS END=78050211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1274:0,94,255:35,0 chr1 78050212 . A . PASS END=78050212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr1 78050213 . G . PASS END=78050309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1203:0,91,255:40,0 chr1 78050310 . T . PASS END=78050318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,90,255:25,0 chr1 78050319 . C . PASS END=78050338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:19:0,42,630:0,49,255:19,0 chr1 78050339 . A . PASS END=78050340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 78097525 . T . PASS END=78097685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:65:0,120,1800:0,175,255:40,0 chr1 78097686 . C . PASS END=78097686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,10:68:15:68:0,15,1568:0,15,255:40,0 chr1 78097687 . T . PASS END=78098025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:37:0,84,1357:0,84,255:40,0 chr1 78098026 . T . PASS END=78098026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:22:37:0,22,969:0,22,255:32,0 chr1 78098027 . T . PASS END=78099039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:37:0,90,1317:0,90,255:40,0 chr1 78105134 . C . PASS END=78105156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:97:0,120,1800:0,255,255:40,0 chr1 78163002 . T . PASS END=78163159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1149:0,80,255:40,0 chr1 78163548 . C . PASS END=78163616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:42:0,114,1710:0,126,255:40,0 chr1 78167054 . C . PASS END=78167057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,120,1414:0,120,255:40,0 chr1 78167058 . A . PASS END=78167058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1376:0,79,255:40,0 chr1 78167059 . T . PASS END=78167156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,114,1646:0,114,255:40,0 chr1 78177420 . T . PASS END=78177540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:57:0,117,1755:0,155,255:40,0 chr1 78178885 . C . PASS END=78178966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,140,255:40,0 chr1 78180299 . C . PASS END=78180398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:42:0,96,1746:0,96,255:40,0 chr1 78180399 . G . PASS END=78180399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,9:56:18:56:0,18,1374:0,18,255:40,0 chr1 78180400 . C . PASS END=78180403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,135,255:40,0 chr1 78180404 . G . LowGQ END=78180404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,10:57:0:57:0,0,1358:40,0,255:38,0 chr1 78180405 . T . PASS END=78180468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1250:0,91,255:40,0 chr1 78181427 . C . PASS END=78181553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:42:0,108,1620:0,126,255:40,0 chr1 78183552 . T . PASS END=78183732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:36:0,94,1212:0,94,255:40,0 chr1 78184281 . C . PASS END=78184326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,137,255:40,0 chr1 78186253 . T . PASS END=78186271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,163,255:40,0 chr1 78186857 . T . PASS END=78186890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:84:0,120,1800:0,253,255:40,0 chr1 78187516 . C . PASS END=78187610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:93:39:0,93,1358:0,93,255:40,0 chr1 78187709 . C . PASS END=78187721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1286:0,89,255:32,0 chr1 78187722 . C . PASS END=78187722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:30,0 chr1 78187723 . C . PASS END=78187729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:34,0 chr1 78187730 . A . PASS END=78187730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 78187731 . A . PASS END=78187731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1304:0,105,255:35,0 chr1 78187732 . A . PASS END=78187732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr1 78187733 . G . PASS END=78187733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 78187734 . C . PASS END=78187735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1159:0,69,255:34,0 chr1 78187736 . A . PASS END=78187736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:35,0 chr1 78187737 . T . PASS END=78187739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:36,0 chr1 78187740 . A . PASS END=78187740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1227:0,59,255:34,0 chr1 78187741 . C . PASS END=78187741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1337:0,73,255:34,0 chr1 78187742 . C . PASS END=78187742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1344:0,81,255:35,0 chr1 78187743 . C . PASS END=78187743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1396:0,68,255:34,0 chr1 78187744 . T . PASS END=78187745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1390:0,81,255:35,0 chr1 78187746 . G . PASS END=78187746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1382:0,46,255:35,0 chr1 78187747 . T . PASS END=78187751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1421:0,84,255:38,0 chr1 78187752 . C . PASS END=78187752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:37,0 chr1 78187753 . A . PASS END=78187754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1444:0,87,255:38,0 chr1 78187755 . A . PASS END=78187755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1402:0,76,255:36,0 chr1 78187756 . T . PASS END=78187761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1391:0,82,255:38,0 chr1 78187762 . G . PASS END=78187762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1339:0,48,255:34,0 chr1 78187763 . C . PASS END=78187843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:38:0,82,1260:0,82,255:40,0 chr1 78187844 . A . PASS END=78187852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:32:0,69,1035:0,80,255:26,0 chr1 78187853 . T . PASS END=78187853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:23,0 chr1 78187854 . C . PASS END=78187865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,68,255:23,0 chr1 78187866 . C . PASS END=78187881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:19:0,44,675:0,44,255:19,0 chr1 78189016 . C . PASS END=78189128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:55:0,120,1800:0,149,255:40,1 chr1 78191307 . C . PASS END=78191307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,892:0,29,255:25,0 chr1 78191308 . T . PASS END=78191308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,828:0,53,255:26,0 chr1 78191309 . T . PASS END=78191310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 78191311 . T . PASS END=78191311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,881:0,56,255:27,0 chr1 78191312 . T . PASS END=78191316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 78191317 . T . PASS END=78191317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 78191318 . G . PASS END=78191318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 78191319 . G . PASS END=78191319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 78191320 . T . PASS END=78191332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:31:0,87,1305:0,92,255:36,0 chr1 78191333 . G . PASS END=78191333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr1 78191334 . G . PASS END=78191382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:36:0,91,1120:0,91,255:40,0 chr1 78191383 . A . PASS END=78191383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1504:0,77,255:40,0 chr1 78191384 . C . PASS END=78191406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:43:0,90,1350:0,90,255:40,0 chr1 78191407 . T . PASS END=78191407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 78191408 . G . PASS END=78191410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:39:0,81,1215:0,117,255:27,0 chr1 78191411 . G . PASS END=78191435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 78191436 . C . PASS END=78191447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,50,255:19,0 chr1 78193980 . C . PASS END=78194397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:41:0,91,1403:0,91,255:40,0 chr1 78195545 . C . PASS END=78195623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:54:0,100,1755:0,100,255:40,0 chr1 78196303 . C . PASS END=78196416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,125,255:40,0 chr1 78197834 . T . PASS END=78197840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,3:102:99:99:0,120,1800:0,177,255:40,0 chr1 78197841 . T . PASS END=78197885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,2:110:99:103:0,120,1800:0,204,255:40,0 chr1 78200032 . C . PASS END=78200101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:69:0,120,1800:0,191,255:40,0 chr1 78201741 . C . PASS END=78201742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,135,255:40,0 chr1 78201743 . C . LowGQ END=78201743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,22:58:0:58:0,0,537:235,0,255:36,0 chr1 78201744 . T . PASS END=78201748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:82:58:0,82,1501:0,82,255:40,0 chr1 78201749 . C . LowGQ END=78201749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,11:61:0:61:0,0,1357:22,0,255:40,0 chr1 78201750 . T . PASS END=78201750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr1 78201751 . A . PASS END=78201751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,8:62:30:62:0,30,1436:0,30,255:40,0 chr1 78201752 . A . PASS END=78201780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:62:0,120,1800:0,142,255:40,0 chr1 78201781 . C . PASS END=78201843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:59:0,120,1800:0,135,255:40,0 chr1 78204950 . C . PASS END=78205096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:90:32:0,90,1350:0,96,255:40,0 chr1 78205097 . T . PASS END=78205097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr1 78205098 . G . PASS END=78205099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 78205100 . C . PASS END=78205102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 78206562 . C . PASS END=78206624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,139,255:40,0 chr1 78207061 . C . PASS END=78207114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:68:0,120,1800:0,178,255:40,0 chr1 78207302 . A . PASS END=78207433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,142,255:40,0 chr1 78245341 . A . PASS END=78245341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 78245342 . T . PASS END=78245342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 78245343 . G . PASS END=78245372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:18,0 chr1 78245373 . C . PASS END=78245374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 78245375 . G . PASS END=78245379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,607:0,40,255:18,0 chr1 78245380 . G . PASS END=78245380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:16,0 chr1 78245381 . C . PASS END=78245381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr1 78245382 . T . PASS END=78245405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,554:0,41,255:17,0 chr1 78245406 . T . PASS END=78245406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 78245407 . G . PASS END=78245409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 78245410 . C . PASS END=78245410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 78245411 . T . PASS END=78245412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 78245413 . G . PASS END=78245413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 78245414 . A . PASS END=78245419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:17,0 chr1 78245420 . A . PASS END=78245420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 78245421 . G . PASS END=78245421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 78248923 . A . PASS END=78249036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:38:0,102,1530:0,110,255:40,0 chr1 78267016 . A . PASS END=78267190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:34:0,87,1252:0,94,255:40,0 chr1 78267191 . A . PASS END=78267193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr1 78268955 . G . PASS END=78269091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:48:0,108,1620:0,144,255:40,0 chr1 78272660 . G . PASS END=78272786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,99,1584:0,99,255:40,0 chr1 78279419 . G . PASS END=78279419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 78279420 . T . PASS END=78279420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 78279421 . A . PASS END=78279552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1141:0,81,255:40,0 chr1 78280793 . G . PASS END=78280793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 78280794 . A . PASS END=78280797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:25,0 chr1 78280798 . T . PASS END=78280807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1155:0,80,255:31,0 chr1 78280808 . G . PASS END=78280808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:30,0 chr1 78280809 . A . PASS END=78280899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,996:0,83,255:40,0 chr1 78280900 . C . PASS END=78280900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1091:0,63,255:31,0 chr1 78280901 . C . PASS END=78280916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1135:0,80,255:32,0 chr1 78308992 . A . PASS END=78309092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:37:0,97,1327:0,97,255:40,0 chr1 78324623 . C . PASS END=78324741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,108,1620:0,143,255:40,0 chr1 78324999 . A . PASS END=78325071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:67:0,120,1800:0,169,255:40,0 chr1 78325725 . G . PASS END=78325811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,102,1489:0,102,255:40,0 chr1 78326909 . A . PASS END=78327007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:38:0,95,1307:0,95,255:40,0 chr1 78329579 . G . PASS END=78329713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:65:0,120,1800:0,153,255:40,0 chr1 78332023 . G . PASS END=78332076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:68:0,120,1800:0,173,255:40,0 chr1 78338686 . C . PASS END=78338799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,1144:0,84,255:40,1 chr1 78338800 . T . PASS END=78338805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:26,0 chr1 78340531 . A . PASS END=78340538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 78340539 . T . PASS END=78340543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 78340544 . T . PASS END=78340544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:25,0 chr1 78340545 . A . PASS END=78340545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 78340546 . T . PASS END=78340548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 78340549 . C . PASS END=78340549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 78340550 . T . PASS END=78340553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 78340554 . A . PASS END=78340554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 78340555 . G . PASS END=78340555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 78340556 . A . PASS END=78340556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 78340557 . C . PASS END=78340733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1012:0,84,255:40,0 chr1 78340734 . A . PASS END=78340749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 78344441 . G . PASS END=78344485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,189,255:40,0 chr1 78354283 . A . PASS END=78354283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 78381782 . T . PASS END=78381782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 78381792 . A . PASS END=78381818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:94:0,120,1800:0,255,255:40,0 chr1 78383251 . A . PASS END=78383429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:90:32:0,90,1225:0,96,255:40,0 chr1 78383430 . G . PASS END=78383442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:40:0,104,1421:0,104,255:38,0 chr1 78383645 . A . PASS END=78383723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:87:0,120,1800:0,212,255:40,0 chr1 78383807 . T . PASS END=78383807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr1 78383810 . G . PASS END=78383958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:63:0,120,1800:0,135,255:40,0 chr1 78383963 . C . PASS END=78383963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,114,1710:0,177,255:38,0 chr1 78390873 . A . PASS END=78390914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,176,255:40,0 chr1 78392099 . G . PASS END=78392296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:27:0,81,965:0,81,255:40,0 chr1 78392300 . A . PASS END=78392300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 78392401 . G . PASS END=78392408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,156,255:40,0 chr1 78392409 . A . PASS END=78392445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,154,255:40,0 chr1 78392446 . G A, 237.77 PASS DP=64;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,30,0:0,34,0:188:276,191,0,2349,191,2349:255,192,0:0,0:2.3777e+02,1.8777e+02,0.0000e+00,4.5000e+02,2.2254e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,31:0,0,39,25 chr1 78392447 . G . PASS END=78392483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,176,255:40,0 chr1 78392484 . A . PASS END=78392509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,173,255:40,0 chr1 78392510 . C . PASS END=78392546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,108,1620:0,112,255:40,0 chr1 78392547 . G . LowGQ END=78392547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,9:50:0:50:0,0,1158:28,0,255:30,0 chr1 78392548 . C . PASS END=78392548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,111,1665:0,132,255:37,0 chr1 78392549 . G . PASS END=78392549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1201:0,65,255:33,0 chr1 78392550 . T . PASS END=78392566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1373:0,98,255:38,0 chr1 78392567 . G . PASS END=78392567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr1 78392568 . G . PASS END=78392577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1327:0,95,255:36,0 chr1 78394996 . G . PASS END=78394997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1142:0,96,255:32,0 chr1 78395001 . G . PASS END=78395162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:40:0,106,1346:0,106,255:40,0 chr1 78395163 . G . PASS END=78395163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,6:64:77:64:0,77,1755:0,77,255:40,0 chr1 78395164 . C . PASS END=78395190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,134,255:40,0 chr1 78398967 . G . PASS END=78399164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:85:38:0,85,1340:0,85,255:40,0 chr1 78401495 . A . PASS END=78401495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr1 78401497 . T . PASS END=78401498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1248:0,102,255:34,0 chr1 78401508 . G . PASS END=78401644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:85:36:0,85,1272:0,85,255:40,0 chr1 78401645 . A . PASS END=78401679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,159,255:40,0 chr1 78401680 . G . PASS END=78401680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,9:72:30:72:0,30,1936:0,30,255:40,0 chr1 78401681 . A . PASS END=78401681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:71:0,120,1800:0,180,255:40,0 chr1 78401682 . G . LowGQ END=78401682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,13:72:0:72:0,0,1782:72,0,255:40,0 chr1 78401683 . C . PASS END=78401719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,150,255:40,0 chr1 78401720 . T . PASS END=78401730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:56:0,120,1800:0,132,255:40,0 chr1 78407708 . G . PASS END=78407893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:37:0,101,1263:0,101,255:40,0 chr1 78408146 . A . PASS END=78408146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 78408147 . A . PASS END=78408152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 78408153 . A . PASS END=78408153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:30,0 chr1 78408154 . A . PASS END=78408514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:31:0,80,1105:0,80,255:40,0 chr1 78408517 . A . PASS END=78408517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr1 78408585 . C . PASS END=78408598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,209,255:40,0 chr1 78408922 . C . LowGQ END=78408922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,14:108:0:108:0,0,2815:175,0,255:40,19 chr1 78411297 . C . PASS END=78411327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,180,255:40,0 chr1 78412215 . C . PASS END=78412261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,203,255:40,0 chr1 78413199 . C . PASS END=78413237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:87:0,120,1800:0,228,255:40,0 chr1 78414451 . T . PASS END=78414459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,140,255:40,0 chr1 78414558 . T . PASS END=78414599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,186,255:40,0 chr1 78414840 . C . PASS END=78414959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1215:0,89,255:40,0 chr1 78414960 . C . PASS END=78414974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:26,0 chr1 78414975 . A . PASS END=78414977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 78414978 . T . PASS END=78414978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr1 78414979 . G . PASS END=78414985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:17,0 chr1 78420940 . C . PASS END=78421014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:35:0,81,1213:0,81,255:40,0 chr1 78422257 . C . PASS END=78422262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr1 78422263 . C . PASS END=78422263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr1 78422264 . A . PASS END=78422265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1001:0,63,255:31,1 chr1 78422266 . T . PASS END=78422311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:32:0,80,969:0,80,255:40,0 chr1 78422312 . C . PASS END=78422312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:36,0 chr1 78422313 . T . PASS END=78422320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:40:0,87,1396:0,87,255:37,0 chr1 78422321 . C . PASS END=78422321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:33,0 chr1 78422322 . T . PASS END=78422326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,104,255:35,0 chr1 78422327 . A . PASS END=78422327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1347:0,56,255:29,0 chr1 78422328 . T . PASS END=78422334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1305:0,104,255:32,0 chr1 78422335 . G . PASS END=78422355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,914:0,62,255:26,0 chr1 78422356 . C . PASS END=78422356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:1:26:0,1,845:0,1,255:21,0 chr1 78422357 . T . PASS END=78422363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,900:0,61,255:23,0 chr1 78422364 . T . PASS END=78422365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:22,0 chr1 78422366 . T . PASS END=78422374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 78422375 . T . PASS END=78422375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr1 78422376 . C . PASS END=78422377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 78422378 . T . PASS END=78422379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 78422380 . C . PASS END=78422380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 78422381 . C . PASS END=78422381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,754:0,38,255:19,0 chr1 78422382 . T . PASS END=78422382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 78422383 . T . PASS END=78422385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 78425869 . C . PASS END=78425875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 78425876 . A . PASS END=78425876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 78425877 . G . PASS END=78425948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,900:0,62,255:26,0 chr1 78426029 . T . PASS END=78426042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 78426043 . T . PASS END=78426043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 78426044 . G . PASS END=78426067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 78426068 . G . PASS END=78426068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 78426069 . G . PASS END=78426070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 78426071 . T . PASS END=78426074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 78426075 . A . PASS END=78426092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,656:0,63,255:21,0 chr1 78426093 . C . PASS END=78426095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 78426096 . G . PASS END=78426096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,668:0,24,255:18,0 chr1 78426097 . C . PASS END=78426115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,692:0,57,255:19,0 chr1 78426116 . C . PASS END=78426120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 78426121 . G . PASS END=78426125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 78426126 . C . PASS END=78426130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 78426131 . A . PASS END=78426146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:19,0 chr1 78426147 . G . PASS END=78426168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 78426169 . A . PASS END=78426180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr1 78428455 . A . PASS END=78428615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:44:0,112,1665:0,112,255:40,0 chr1 78429259 . C . PASS END=78429396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1083:0,81,255:40,0 chr1 78429397 . C . PASS END=78429400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:36:0,75,1125:0,91,255:25,0 chr1 78429747 . C . PASS END=78429847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:97:38:0,97,1311:0,97,255:40,0 chr1 78429939 . C . PASS END=78430041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:52:0,120,1800:0,140,255:40,0 chr1 78430331 . A . PASS END=78430334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:90:42:0,90,1308:0,90,255:40,0 chr1 78430335 . A . PASS END=78430335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1282:0,70,255:38,0 chr1 78430336 . T . PASS END=78430432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:42:0,90,1394:0,90,255:40,0 chr1 78430555 . T . PASS END=78430646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,102,1530:0,132,255:40,0 chr1 78430647 . C . PASS END=78430653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:53:0,87,1305:0,152,255:34,0 chr1 78430753 . C . PASS END=78430755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:37:0,98,1380:0,98,255:35,0 chr1 78430756 . A . PASS END=78430756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:33,0 chr1 78430757 . A . PASS END=78430767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:36:0,96,1281:0,97,255:35,0 chr1 78430768 . A . PASS END=78430768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1166:0,56,255:31,0 chr1 78430769 . G . PASS END=78430888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:31:0,84,1250:0,91,255:40,0 chr1 78430889 . A . PASS END=78430890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 78430891 . C . PASS END=78430895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 78430896 . C . PASS END=78430915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr1 78432378 . T . PASS END=78432435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:64:0,120,1800:0,143,255:40,0 chr1 78432568 . C . PASS END=78432604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:99:53:0,119,1800:0,119,255:40,0 chr1 78432605 . T . PASS END=78432639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:96:51:0,96,1773:0,96,255:40,0 chr1 78432733 . T . PASS END=78432785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,111,1665:0,112,255:40,0 chr1 78433311 . C . PASS END=78433350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,1:116:99:86:0,120,1800:0,202,255:40,0 chr1 78433849 . A . PASS END=78433887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:88:0,120,1800:0,209,255:40,1 chr1 78434706 . C . PASS END=78434768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:36:0,98,1364:0,98,255:40,0 chr1 78435609 . C . PASS END=78435637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,128,255:40,0 chr1 78435638 . C . PASS END=78435674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,155,255:40,0 chr1 78435675 . C . PASS END=78435675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,8:62:31:62:0,31,1715:0,31,255:40,0 chr1 78435676 . A . PASS END=78435699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:52:0,89,1366:0,89,255:40,0 chr1 78444569 . C . PASS END=78444678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:39:0,81,1215:0,101,255:40,0 chr1 78444679 . A . PASS END=78444688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:25,0 chr1 78470795 . A . PASS END=78471005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:42:0,93,1417:0,93,255:40,0 chr1 78478735 . G . PASS END=78478735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 78478736 . G . PASS END=78478736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,868:0,72,255:24,0 chr1 78478737 . T . PASS END=78478737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 78478738 . T . PASS END=78478744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:24,0 chr1 78478745 . A . PASS END=78478745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 78478746 . G . PASS END=78478755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr1 78478756 . G . PASS END=78478756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 78478757 . T . PASS END=78478757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 78478758 . A . PASS END=78479303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:28:0,81,1055:0,83,255:40,0 chr1 78481698 . G . PASS END=78481700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 78481701 . T . PASS END=78481791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:31:0,93,1141:0,93,255:40,0 chr1 78481792 . G . PASS END=78481792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,9:52:7:52:0,7,1406:0,7,255:40,0 chr1 78481793 . A . PASS END=78481931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:40:0,86,1185:0,86,255:40,0 chr1 78510761 . A . PASS END=78510778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:109:0,120,1800:0,255,255:40,0 chr1 78511779 . A . PASS END=78511781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,909:0,78,255:26,0 chr1 78511782 . C . PASS END=78511784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr1 78511785 . C . PASS END=78511785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 78511786 . T . PASS END=78511791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 78511792 . T . PASS END=78511792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 78511793 . G . PASS END=78511814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:30,0 chr1 78511815 . T . PASS END=78511815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 78511816 . C . PASS END=78511832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1210:0,96,255:32,0 chr1 78511833 . C . PASS END=78511834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 78511835 . G . PASS END=78511843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:28,0 chr1 78511844 . C . PASS END=78511882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,978:0,75,255:26,0 chr1 78511883 . C . PASS END=78511884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 78511885 . G . PASS END=78511911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 78511912 . A . PASS END=78511916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 78511917 . C . PASS END=78511919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 78511920 . C . PASS END=78511922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 78511923 . G . PASS END=78511923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 78511924 . C . PASS END=78511927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 78511928 . C . PASS END=78511930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 78511931 . T . PASS END=78511931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 78511932 . A . PASS END=78511936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 78511937 . C . PASS END=78511937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 78511938 . A . PASS END=78511960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 78511961 . C . PASS END=78512001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,491:0,45,255:17,0 chr1 78512002 . A . PASS END=78512002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 78512003 . A . PASS END=78512003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 78512004 . A . PASS END=78512004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 78512005 . T . PASS END=78512012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,468:0,45,255:15,0 chr1 78512013 . T . PASS END=78512013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 78512014 . C . PASS END=78512018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 78546359 . A . PASS END=78546536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:89:32:0,89,1226:0,89,255:40,0 chr1 78546537 . T . PASS END=78546537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 78546538 . T . PASS END=78546542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr1 78546543 . A . PASS END=78546543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:30,0 chr1 78546544 . G . PASS END=78546544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 78560636 . A . PASS END=78560816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:43:0,117,1654:0,117,255:40,0 chr1 78578177 . T C, 101.18 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,7,0:0,11,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,8:0,0,9,9 chr1 78585077 . A . PASS END=78585085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,143,255:40,0 chr1 78585086 . T C, 49.79 PASS DP=65;MQ=250.00;MQRankSum=6.915;ReadPosRankSum=5.628;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,31,0:0.477,0.000:65:21,23,0:13,8,0:48:85,0,50,1080,1208,2288:255,0,255:34,0:4.9791e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,10,19,12:17,17,17,14 chr1 78585087 . G . PASS END=78585123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,197,255:40,0 chr1 78585124 . G . PASS END=78585183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:57:0,120,1800:0,139,255:40,0 chr1 78591565 . C . PASS END=78591646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:74:0,120,1800:0,197,255:40,0 chr1 78601276 . C . PASS END=78601414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:28:0,81,1215:0,84,255:40,0 chr1 78601415 . A . PASS END=78601425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:50:0,84,1260:0,136,255:40,0 chr1 78601426 . G . PASS END=78601427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:66:50:0,66,990:0,150,255:23,0 chr1 78956432 . T C, 95.16 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:133,48,0,620,48,620:255,48,0:0,0:9.5156e+01,4.5156e+01,1.3254e-04,4.5000e+02,7.9926e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,9:0,0,7,9 chr1 78957441 . C A, 44.92 PASS DP=35;MQ=247.70;MQRankSum=4.148;ReadPosRankSum=2.236;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,13,0:0.371,0.000:35:11,8,0:11,5,0:44:80,0,50,457,779,1236:255,0,255:22,0:4.4918e+01,1.6179e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,8,5:14,8,7,6 chr1 78958429 . A . PASS END=78958430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 78958431 . G . PASS END=78959107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,996:0,84,255:40,2 chr1 78959108 . T . PASS END=78959108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1607:0,72,255:40,2 chr1 78959109 . T . PASS END=78959226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:37:0,84,1260:0,85,255:40,0 chr1 78963559 . G . PASS END=78963629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:88:0,120,1800:0,233,255:40,0 chr1 78969621 . A . PASS END=78969627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:99:0,120,1800:0,255,255:40,0 chr1 78997898 . C . PASS END=78997922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,120,1800:0,122,255:40,0 chr1 79002091 . G . PASS END=79002369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:82:28:0,82,987:0,82,255:40,0 chr1 79002370 . T . PASS END=79002370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:27,0 chr1 79002371 . A . PASS END=79002371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 79002372 . G . PASS END=79002372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 79093601 . A . PASS END=79094078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:92:45:0,92,1401:0,92,255:40,0 chr1 79094636 . G . PASS END=79094684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:88:0,120,1800:0,239,255:40,0 chr1 79095405 . G . PASS END=79095600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:42:0,109,1686:0,109,255:40,0 chr1 79095678 . G . PASS END=79095722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:84:0,120,1800:0,214,255:40,0 chr1 79101022 . T . PASS END=79101174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:48:0,111,1665:0,117,255:40,0 chr1 79102717 . T . PASS END=79102888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:36:0,83,1256:0,83,255:40,0 chr1 79106706 . G . PASS END=79106806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:61:0,120,1800:0,154,255:40,0 chr1 79107120 . G . PASS END=79107294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:39:0,98,1340:0,98,255:40,0 chr1 79107460 . G . PASS END=79107494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,158,255:40,0 chr1 79115881 . A . PASS END=79115881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:26,0 chr1 79115882 . T . PASS END=79116337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:81:28:0,81,1041:0,81,255:40,2 chr1 79119928 . A . PASS END=79119964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:105:0,120,1800:0,255,255:40,0 chr1 79120699 . G . PASS END=79120699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 79120700 . C . PASS END=79120706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:31,0 chr1 79120707 . A . PASS END=79120707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:30,0 chr1 79120708 . G . PASS END=79120708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 79120709 . A . PASS END=79120709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1109:0,58,255:31,0 chr1 79120710 . G . PASS END=79120894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:36:0,96,1352:0,108,255:40,0 chr1 79121047 . T . PASS END=79121185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:30:0,81,1215:0,90,255:40,0 chr1 79121186 . A . PASS END=79121196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:26,0 chr1 79124997 . T . PASS END=79125168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:37:0,93,1395:0,109,255:40,0 chr1 79126239 . G . PASS END=79126339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,153,255:40,0 chr1 79127071 . C . PASS END=79127076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:93:0,120,1800:0,236,255:40,0 chr1 79128389 . C . PASS END=79128527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,99,1385:0,99,255:40,0 chr1 79128528 . A . PASS END=79128569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:59:0,93,1395:0,131,255:40,0 chr1 79128570 . G GT, 49.63 PASS DP=63;MQ=250.00;MQRankSum=6.744;ReadPosRankSum=-1.016;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,29,0:0.468,0.000:62:18,16,0:15,13,0:48:79,0,50,929,1218,2147:255,0,255:32,45:4.9634e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:14,19,16,13:13,20,19,10 chr1 79128571 . G . LowGQ END=79128571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,28:66:0:66:0,0,432:255,0,255:40,0 chr1 79128572 . T . PASS END=79128602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,155,255:40,0 chr1 79129450 . G . PASS END=79129496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:82:0,120,1800:0,203,255:40,2 chr1 79355500 . T . PASS END=79355506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,180,255:40,0 chr1 79356839 . T . PASS END=79356901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:100:0,120,1800:0,255,255:40,0 chr1 79357209 . C . PASS END=79357322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:43:0,96,1440:0,120,255:40,0 chr1 79357323 . G . PASS END=79357359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1350:0,101,255:38,0 chr1 79357360 . G C, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,21,0:0.583,0.000:36:9,9,0:6,12,0:47:85,0,48,742,529,1271:255,0,255:14,0:5.0000e+01,7.9471e-05,5.0816e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,7,14:7,8,11,10 chr1 79357361 . C . PASS END=79357373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 79357374 . A . PASS END=79357377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:31:0,72,1080:0,80,255:26,0 chr1 79358783 . C . PASS END=79358794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:53:0,93,1776:0,93,255:40,0 chr1 79358795 . A . PASS END=79358874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:56:0,120,1800:0,136,255:40,0 chr1 79383319 . A . PASS END=79383346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:82:0,120,1800:0,223,255:40,0 chr1 79383347 . A . PASS END=79383385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:96:0,120,1800:0,224,255:40,0 chr1 79383515 . A . PASS END=79383705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:93:46:0,93,1395:0,111,255:40,0 chr1 79383706 . T . PASS END=79383715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1260:0,89,255:31,0 chr1 79383716 . G . PASS END=79383722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:33:0,69,1035:0,83,255:26,0 chr1 79383723 . T . PASS END=79383735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:24:0,51,765:0,71,255:19,0 chr1 79385868 . C . PASS END=79386071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:84:37:0,84,1260:0,95,255:40,0 chr1 79387298 . A . PASS END=79387471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:29:0,84,1189:0,87,255:40,0 chr1 79392571 . C . PASS END=79392718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,104,1800:0,104,255:40,0 chr1 79392719 . G . PASS END=79392755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,120,1800:0,122,255:40,0 chr1 79392756 . C A, 47.98 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=0.517;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:13,10,0:13,9,0:47:83,0,50,679,905,1584:255,0,255:25,0:4.7980e+01,9.0861e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,18,7,12:15,11,14,5 chr1 79392757 . A . PASS END=79392776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:37:0,81,1215:0,111,255:40,0 chr1 79401980 . C . PASS END=79402096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:49:0,108,1624:0,108,255:40,0 chr1 79403492 . C . PASS END=79403675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:49:0,115,1632:0,115,255:40,0 chr1 79403785 . A . PASS END=79403788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,201,255:40,0 chr1 79403789 . A . PASS END=79403964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:67:0,120,1800:0,186,255:40,0 chr1 79404873 . T . PASS END=79404943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,165,255:40,0 chr1 79411959 . C . PASS END=79412111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:40:0,104,1449:0,104,255:40,0 chr1 79470755 . C . PASS END=79470904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,102,1496:0,104,255:40,0 chr1 79472318 . C . PASS END=79472339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,138,255:40,0 chr1 82302670 . A . PASS END=82302742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:87:0,120,1800:0,253,255:40,0 chr1 82372702 . G . PASS END=82372702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 82372703 . T . PASS END=82372915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:27:0,81,972:0,81,255:40,0 chr1 82402412 . G . PASS END=82402415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr1 82402416 . A . PASS END=82402521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:33:0,83,1194:0,83,255:40,0 chr1 82406877 . A . PASS END=82406896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,128,255:40,0 chr1 82407715 . A . PASS END=82407729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:89:0,120,1800:0,237,255:40,0 chr1 82408653 . T . PASS END=82408662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,826:0,64,255:27,0 chr1 82408663 . T . PASS END=82408665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1288:0,102,255:34,0 chr1 82408666 . T . PASS END=82408666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:32,0 chr1 82408667 . G . PASS END=82409453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:80:34:0,80,1186:0,80,255:40,0 chr1 82415873 . T . PASS END=82416108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:35:0,93,1304:0,93,255:40,0 chr1 82416109 . T . PASS END=82416110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:36:0,75,1272:0,75,255:32,0 chr1 82416111 . G . PASS END=82416140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1182:0,86,255:33,0 chr1 82416141 . A . PASS END=82416165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,870:0,61,255:26,0 chr1 82416166 . G . PASS END=82416166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 82416702 . G . PASS END=82416804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:81:32:0,81,1215:0,81,255:40,0 chr1 82416805 . G . PASS END=82416805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 82417641 . A . PASS END=82417826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,99,1485:0,117,255:40,0 chr1 82418671 . C . PASS END=82418709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,183,255:40,0 chr1 82421561 . G . PASS END=82421575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 82421576 . G . PASS END=82421595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:33:0,93,1355:0,95,255:40,0 chr1 82421596 . C T, 188.45 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,24,0:0,23,0:138:226,141,0,1814,141,1814:255,141,0:0,0:1.8845e+02,1.3845e+02,0.0000e+00,4.5000e+02,1.7322e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,16:0,0,24,23 chr1 82421597 . G . PASS END=82421633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,109,1800:0,109,255:40,0 chr1 82421634 . A . PASS END=82421744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,120,1800:0,147,255:40,0 chr1 82431742 . T . PASS END=82431867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:94:44:0,94,1620:0,94,255:40,0 chr1 82432088 . G . PASS END=82432287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:33:0,84,1260:0,99,255:40,0 chr1 82432288 . A . PASS END=82432290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:67:28:0,67,933:0,67,255:24,0 chr1 82432291 . G . PASS END=82432293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,84,255:18,0 chr1 82433710 . C . PASS END=82433723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 82433724 . C . PASS END=82433724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 82433725 . A . PASS END=82433729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 82433730 . A . PASS END=82433731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 82433732 . A . PASS END=82433732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,838:0,51,255:26,0 chr1 82433733 . C . PASS END=82433734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 82433735 . G . PASS END=82433735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 82433736 . C . PASS END=82433883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:29:0,81,1102:0,87,255:40,0 chr1 82434862 . T . PASS END=82435071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,112,1421:0,112,255:40,0 chr1 82435998 . A . PASS END=82436218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:31:0,80,1125:0,80,255:40,0 chr1 82437536 . T . PASS END=82437602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:84:0,120,1800:0,217,255:40,0 chr1 82445553 . C . PASS END=82445644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:83:0,120,1800:0,186,255:40,0 chr1 82446479 . T . PASS END=82446523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:61:0,120,1800:0,146,255:40,0 chr1 82446808 . C . PASS END=82446834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,154,255:40,0 chr1 82447492 . G . PASS END=82447660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:45:0,120,1800:0,135,255:40,0 chr1 82450267 . G . PASS END=82450275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 82450276 . G . PASS END=82450298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,691:0,60,255:24,0 chr1 82450299 . C . PASS END=82450304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:30,0 chr1 82450305 . C . PASS END=82450305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 82450306 . T . PASS END=82450329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1163:0,90,255:36,0 chr1 82450330 . A . PASS END=82450330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:34,0 chr1 82450331 . G . PASS END=82450380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1287:0,91,255:38,0 chr1 82450381 . T . PASS END=82450381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:28,0 chr1 82450382 . C . PASS END=82450395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 82450943 . A . PASS END=82451039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:67:0,120,1800:0,185,255:40,0 chr1 82452585 . G . PASS END=82452611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,177,255:40,0 chr1 82452612 . A . PASS END=82452907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,177,255:40,1 chr1 82452944 . G . PASS END=82453025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:81:0,120,1800:0,210,255:40,0 chr1 82453553 . C . PASS END=82453608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:42:0,97,1452:0,97,255:40,0 chr1 82455341 . C . PASS END=82455378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,173,255:40,0 chr1 82456075 . G . PASS END=82456829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1202:0,81,255:40,0 chr1 84335645 . T . PASS END=84335765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,102,1646:0,102,255:40,0 chr1 84348646 . C . PASS END=84348805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:35:0,81,1215:0,90,255:40,0 chr1 84348806 . T . PASS END=84348819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:26:0,60,900:0,65,255:25,0 chr1 84352958 . T . PASS END=84352967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,117,1755:0,126,255:40,0 chr1 84356000 . T . PASS END=84356164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:51:0,111,1665:0,114,255:40,0 chr1 84369762 . T . PASS END=84369842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,129,255:40,0 chr1 84372012 . A . PASS END=84372146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:66:0,120,1800:0,182,255:40,0 chr1 84372189 . T . PASS END=84372206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:79:0,120,1800:0,237,255:40,0 chr1 84373139 . C . PASS END=84373147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:24,0 chr1 84373148 . G . PASS END=84373148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 84373149 . T . PASS END=84373153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 84373154 . A . PASS END=84373154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 84373155 . G . PASS END=84373155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 84373156 . A . PASS END=84373156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 84373157 . G . PASS END=84373160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,901:0,68,255:27,0 chr1 84373161 . G . PASS END=84373166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1049:0,82,255:35,0 chr1 84373167 . T . PASS END=84373167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 84373168 . T . PASS END=84373344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:35:0,81,1181:0,81,255:40,0 chr1 84376848 . T . PASS END=84376853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,124,255:40,0 chr1 84376854 . G . PASS END=84377030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:84:40:0,84,1260:0,118,255:40,0 chr1 84377031 . G . PASS END=84377031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:40:0,75,1125:0,120,255:25,0 chr1 84377032 . C . PASS END=84377033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,98,255:27,0 chr1 84377034 . T . PASS END=84377034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:37:0,75,1125:0,94,255:24,0 chr1 84377035 . A . PASS END=84377046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:48:25:0,48,720:0,75,255:19,0 chr1 84378172 . C . PASS END=84378186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:102:0,120,1800:0,255,255:40,0 chr1 84378679 . T . PASS END=84378723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,188,255:40,0 chr1 84383287 . C . PASS END=84383373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,101,1800:0,101,255:40,0 chr1 84385382 . C . PASS END=84385390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 84385391 . T . PASS END=84385391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 84385392 . T . PASS END=84385483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1025:0,87,255:40,0 chr1 84385484 . A . PASS END=84385484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:32,0 chr1 84385485 . A . PASS END=84385517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1186:0,86,255:34,0 chr1 84386770 . C . PASS END=84386843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,167,255:40,0 chr1 84386930 . C . PASS END=84387077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,99,1530:0,99,255:40,0 chr1 84394819 . C . PASS END=84394913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,120,1800:0,139,255:40,0 chr1 84399291 . C . PASS END=84399449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:36:0,82,1267:0,82,255:40,0 chr1 84403535 . T . PASS END=84403699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:44:0,116,1604:0,116,255:40,0 chr1 84408146 . C . PASS END=84408153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 84408154 . A . PASS END=84408154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 84408155 . C . PASS END=84408157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1097:0,93,255:31,0 chr1 84408158 . A . PASS END=84408158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 84408159 . T . PASS END=84408362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:80:32:0,80,1148:0,80,255:40,0 chr1 84412807 . C . PASS END=84412951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:36:0,90,1350:0,92,255:40,0 chr1 84412952 . G . PASS END=84412965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,67,255:26,0 chr1 84414311 . T . PASS END=84414378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,126,255:40,0 chr1 84415548 . C . PASS END=84415658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1246:0,89,255:40,0 chr1 84415659 . T . PASS END=84415669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,73,255:26,0 chr1 84417528 . C . PASS END=84417659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:44:0,105,1575:0,131,255:40,0 chr1 84417870 . C . PASS END=84417894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,144,255:40,0 chr1 84544009 . A . PASS END=84544009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 84544010 . T . PASS END=84544010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 84544011 . G . PASS END=84544012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr1 84544013 . G . PASS END=84544013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 84544014 . G . PASS END=84544014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 84544015 . A . PASS END=84544030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 84544031 . A . PASS END=84544031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 84544032 . G . PASS END=84544035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 84544036 . G . PASS END=84544036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 84544037 . G . PASS END=84544038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 84544039 . A . PASS END=84544039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 84544040 . G . PASS END=84544042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 84544043 . A . PASS END=84544043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 84544044 . G . PASS END=84544044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 84544045 . G . PASS END=84544045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr1 84544046 . T . PASS END=84544046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:20,0 chr1 84544047 . G . PASS END=84544047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 84544048 . G . PASS END=84544049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 84544050 . G . PASS END=84544050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 84544051 . A . PASS END=84544051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 84544052 . G . PASS END=84544054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:22,0 chr1 84610045 . A . PASS END=84610045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr1 84610046 . T . PASS END=84610046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 84610047 . G . PASS END=84610048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 84610049 . C . PASS END=84610049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 84610050 . A . PASS END=84610050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 84610051 . G . PASS END=84610051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:30,0 chr1 84610052 . C . PASS END=84610060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:36,0 chr1 84610061 . A . PASS END=84610061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1120:0,66,255:34,0 chr1 84610062 . A . PASS END=84610231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:36:0,87,1292:0,87,255:40,0 chr1 84630096 . A . PASS END=84630105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:73:0,120,1800:0,181,255:40,0 chr1 84630690 . A . PASS END=84630696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,231,255:40,0 chr1 84639012 . C . PASS END=84639013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:112:0,120,1800:0,255,255:40,0 chr1 84639014 . C . PASS END=84639035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:111:0,120,1800:0,255,255:40,0 chr1 84640716 . C . PASS END=84640728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,188,255:40,0 chr1 84640729 . A . PASS END=84640739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,171,255:40,0 chr1 84641482 . A . PASS END=84641490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,238,255:40,0 chr1 84644852 . A . PASS END=84644856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,179,255:40,0 chr1 84644859 . G . PASS END=84644908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,153,255:40,0 chr1 84644909 . G . PASS END=84644921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,140,255:40,0 chr1 84647343 . A . PASS END=84647411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,175,255:40,0 chr1 84647883 . A . PASS END=84648011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:40:0,93,1446:0,93,255:40,0 chr1 84649720 . G . PASS END=84649818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,117,1443:0,117,255:40,0 chr1 84650783 . G . PASS END=84650865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:45:0,120,1800:0,134,255:40,0 chr1 84662299 . T . PASS END=84662425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,111,1390:0,114,255:40,0 chr1 84663412 . G . PASS END=84663507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,154,255:40,0 chr1 84668366 . G . PASS END=84668488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:38:0,97,1611:0,97,255:40,1 chr1 84670162 . C . PASS END=84670173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:111:0,120,1800:0,255,255:40,0 chr1 84679836 . G . PASS END=84679992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:34:0,84,1260:0,89,255:40,0 chr1 84679993 . A . PASS END=84680000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:34:0,72,1080:0,89,255:26,0 chr1 84700863 . G . PASS END=84700988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,123,255:40,0 chr1 84764241 . A . PASS END=84764250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:17,0 chr1 84765300 . A . PASS END=84765327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:107:0,120,1800:0,255,255:40,0 chr1 84768886 . T . PASS END=84768970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:41:0,120,1800:0,123,255:40,0 chr1 84791320 . T . PASS END=84791431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,108,1710:0,108,255:40,0 chr1 84815314 . G . PASS END=84815457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:53:0,120,1800:0,146,255:40,0 chr1 84853963 . G . PASS END=84853994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1200:0,83,255:40,0 chr1 84853995 . A . PASS END=84854046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,128,255:40,0 chr1 84864248 . A . PASS END=84864255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 84864256 . G C, 47.68 PASS DP=32;MQ=250.00;MQRankSum=4.719;ReadPosRankSum=2.609;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,13,0:0.406,0.000:32:12,8,0:7,5,0:47:82,0,50,465,643,1108:255,0,255:19,0:4.7683e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,8,5:9,10,7,6 chr1 84864257 . A . PASS END=84864293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:32:0,82,1113:0,82,255:40,0 chr1 84864294 . T . PASS END=84864316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:40:0,89,1413:0,89,255:40,0 chr1 84864317 . G . PASS END=84864317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1767:0,73,255:39,0 chr1 84864318 . T . PASS END=84864360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:36:0,89,1395:0,89,255:40,0 chr1 84864361 . A . PASS END=84864361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:30,0 chr1 84864362 . G . PASS END=84864372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1157:0,82,255:32,0 chr1 84867584 . G . PASS END=84867584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 84867585 . T . PASS END=84867585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 84867586 . T . PASS END=84867586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 84867587 . T . PASS END=84867587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 84867588 . A . PASS END=84867588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 84867589 . C . PASS END=84867590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 84867591 . T . PASS END=84867688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:33:0,98,1197:0,98,255:40,0 chr1 84867689 . G . LowGQ END=84867689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,11:59:0:59:0,0,1313:73,0,255:40,0 chr1 84867690 . C . PASS END=84867756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1215:0,102,255:40,0 chr1 84867757 . C . PASS END=84867761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:34:0,75,1125:0,86,255:25,0 chr1 84874120 . A . PASS END=84874201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:57:0,120,1800:0,162,255:40,0 chr1 84876521 . G . PASS END=84876668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:39:0,84,1260:0,101,255:40,0 chr1 84876669 . G . PASS END=84876678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:63:34:0,63,945:0,102,255:23,0 chr1 84876679 . A . PASS END=84876682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:54:32:0,54,810:0,86,255:19,0 chr1 84878032 . A . PASS END=84878034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 84878035 . C . PASS END=84878035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 84878036 . T . PASS END=84878036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 84878037 . C . PASS END=84878037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 84878038 . A . PASS END=84878059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:19,0 chr1 84878060 . C . PASS END=84878067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:25,0 chr1 84878068 . G . PASS END=84878068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 84878069 . C . PASS END=84878075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,969:0,72,255:25,0 chr1 84878076 . A . PASS END=84878088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:29,0 chr1 84878089 . T . PASS END=84878089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 84878090 . T . PASS END=84878183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:33,0 chr1 84878184 . G . PASS END=84878184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 84878185 . G . PASS END=84878187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1116:0,87,255:29,0 chr1 84878188 . A . PASS END=84878188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 84878189 . A . PASS END=84878199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 84878200 . A . PASS END=84878211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:25,0 chr1 84878212 . C . PASS END=84878212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 84878213 . G . PASS END=84878214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 84878215 . A . PASS END=84878215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 84878216 . T . PASS END=84878229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:25,0 chr1 84880211 . A . PASS END=84880342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:30:0,88,1080:0,88,255:40,0 chr1 84880343 . T . PASS END=84880379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,125,255:40,0 chr1 84880380 . T C, 50.00 PASS DP=62;MQ=250.00;MQRankSum=6.744;ReadPosRankSum=3.301;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,33,0:0.532,0.000:62:19,11,0:10,22,0:48:85,0,50,1115,1008,2123:255,0,255:29,0:5.0000e+01,6.7045e-05,5.2667e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,14,19:13,16,14,19 chr1 84880381 . G . PASS END=84880426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,185,255:40,0 chr1 84880427 . G A, 50.00 PASS DP=76;MQ=250.00;MQRankSum=7.493;ReadPosRankSum=3.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,39,0:0.513,0.000:76:14,25,0:23,14,0:48:85,0,50,1321,1286,2607:255,0,255:32,0:5.0000e+01,6.5492e-05,5.2955e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,17,19,20:21,16,21,18 chr1 84880428 . T . PASS END=84880464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,160,255:40,0 chr1 84880465 . A . PASS END=84880551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:32:0,93,1210:0,95,255:40,0 chr1 84944965 . A . LowGQ END=84944965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,382:0,0,255:12,0 chr1 84944966 . T . PASS END=84944966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 84944967 . G . PASS END=84944977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 84944978 . G . PASS END=84944978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 84944979 . G . LowGQ END=84944979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:12,0 chr1 84944980 . G . PASS END=84944984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 84944985 . G . PASS END=84944988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 84944989 . A G, 49.49 PASS DP=14;MQ=250.00;MQRankSum=3.034;ReadPosRankSum=3.034;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,6,0:0.429,0.000:14:3,0,0:5,6,0:48:84,0,50,215,248,462:190,0,252:8,0:4.9488e+01,7.0669e-05,5.3000e+01,2.1460e+02,2.8245e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,5,1:5,3,1,5 chr1 84944990 . G . PASS END=84944992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 84944993 . G . PASS END=84944993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 84944994 . C . PASS END=84944994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 84944995 . A . PASS END=84944995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 84944996 . G . PASS END=84944996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 84944997 . C . PASS END=84944997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 84944998 . G . PASS END=84945007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 84945008 . G . PASS END=84945026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 84945027 . T . PASS END=84945037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 84945038 . T . PASS END=84945038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 84945039 . T . PASS END=84945042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 84945043 . G . PASS END=84945064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 84945065 . G . PASS END=84945086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:17,0 chr1 84945087 . A . PASS END=84945087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 84945088 . C . PASS END=84945150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,540:0,41,255:19,0 chr1 84945151 . C . PASS END=84945151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 84945152 . G . PASS END=84945162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 84945163 . T . PASS END=84945163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 84945164 . T . PASS END=84945168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,550:0,45,255:15,0 chr1 84945169 . C . PASS END=84945184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 84945185 . A . LowGQ END=84945185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 84945186 . G . PASS END=84945187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 84945188 . G . PASS END=84945192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 84946639 . G . PASS END=84946695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:86:0,120,1800:0,225,255:40,0 chr1 84948598 . G . PASS END=84948702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:64:0,120,1800:0,192,255:40,0 chr1 84955316 . G . PASS END=84955411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:62:0,120,1800:0,176,255:40,0 chr1 84956002 . A . PASS END=84956118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:29:0,81,1089:0,82,255:40,0 chr1 84956119 . G . PASS END=84956146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:58:0,93,1395:0,143,255:40,0 chr1 84956147 . A . PASS END=84956155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:63:55:0,63,945:0,141,255:25,0 chr1 84961056 . A . PASS END=84961127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:41:0,114,1710:0,123,255:40,0 chr1 84961128 . A . PASS END=84961128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:37,0 chr1 84961129 . A . PASS END=84961138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,122,255:40,0 chr1 84961565 . A . PASS END=84961746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:42:0,101,1492:0,101,255:40,0 chr1 84961927 . A . PASS END=84962053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:47:0,102,1530:0,113,255:40,0 chr1 84963112 . C . PASS END=84963112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1402:0,65,255:38,0 chr1 84963113 . C . PASS END=84963153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1350:0,93,255:40,0 chr1 84967528 . C . PASS END=84967529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 84967530 . A . PASS END=84967533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 84967534 . A . PASS END=84967534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,866:0,67,255:27,0 chr1 84967535 . A . PASS END=84967547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 84967548 . T . PASS END=84967553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 84967554 . G . PASS END=84967563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 84967564 . A . PASS END=84967564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 84967565 . T . PASS END=84967566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 84967567 . T . PASS END=84967567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:27,0 chr1 84967568 . G . PASS END=84967586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1188:0,85,255:32,0 chr1 84967587 . T . PASS END=84967587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:30,0 chr1 84967588 . C . PASS END=84967589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:31,0 chr1 84967590 . G . PASS END=84967590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:29,0 chr1 84967591 . C . PASS END=84967597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:31,0 chr1 84967598 . T . PASS END=84967633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 84967634 . T . PASS END=84967634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 84967635 . C . PASS END=84967640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 84967641 . C . PASS END=84967650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,668:0,43,255:19,0 chr1 84967651 . A . PASS END=84967653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:20:0,33,495:0,60,255:12,0 chr1 84971694 . T . PASS END=84971694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:5,0 chr1 84971695 . T . PASS END=84971702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 84971703 . G . PASS END=84971728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 84971729 . G . PASS END=84971729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 84971730 . T . PASS END=84971774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 84981977 . A . PASS END=84982078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:83:62:0,83,1800:0,83,255:40,0 chr1 84986268 . T . PASS END=84986374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:52:0,120,1800:0,144,255:40,0 chr1 84988073 . A . PASS END=84988190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,119,1607:0,119,255:40,0 chr1 84991379 . G . PASS END=84991432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:72:0,120,1800:0,209,255:40,0 chr1 84991528 . G . PASS END=84991631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,128,255:40,0 chr1 84991632 . T . PASS END=84991668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,143,255:40,0 chr1 84991669 . G C, 49.45 PASS DP=50;MQ=250.00;MQRankSum=6.034;ReadPosRankSum=3.796;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,23,0:0.460,0.000:50:11,11,0:16,12,0:48:84,0,50,823,953,1776:255,0,255:24,0:4.9451e+01,7.0928e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,14,9:15,12,12,11 chr1 84991670 . T . PASS END=84991706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,115,1800:0,115,255:40,0 chr1 84991707 . T . PASS END=84991756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1139:0,80,255:40,0 chr1 84998543 . C . PASS END=84998657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:98:55:0,98,1800:0,98,255:40,0 chr1 84999305 . A . PASS END=84999332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,115,1800:0,115,255:40,0 chr1 84999392 . T . PASS END=84999449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1215:0,114,255:40,0 chr1 85001033 . A . PASS END=85001063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,194,255:40,0 chr1 85001064 . A . PASS END=85001129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:71:0,120,1800:0,182,255:40,0 chr1 85008784 . T . PASS END=85008814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,173,255:40,0 chr1 85009885 . A . PASS END=85009987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:73:0,99,1800:0,99,255:40,0 chr1 85011317 . G . PASS END=85011442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,186,255:40,0 chr1 85014469 . C . PASS END=85014472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:88:57:0,88,1672:0,88,255:40,0 chr1 85014473 . C . PASS END=85014475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,5:62:44:62:0,44,1723:0,44,255:40,0 chr1 85014476 . T . PASS END=85014478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:99:62:0,120,1800:0,130,255:40,0 chr1 85014479 . T . PASS END=85014479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,9:62:14:62:0,14,1537:0,14,255:40,0 chr1 85014480 . T . PASS END=85014484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,4:62:99:62:0,105,1800:0,105,255:40,0 chr1 85014485 . G . PASS END=85014485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:45:63:0,45,1799:0,45,255:40,0 chr1 85014486 . A . PASS END=85014493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:84:64:0,84,1800:0,84,255:40,0 chr1 85014494 . C . LowGQ END=85014494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,9:66:0:66:0,0,1831:18,0,255:40,0 chr1 85014495 . T . PASS END=85014495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,5:66:79:66:0,79,2010:0,79,255:40,0 chr1 85014496 . T . PASS END=85014496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,3:66:90:66:0,90,2183:0,90,255:40,0 chr1 85014497 . G . PASS END=85014497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:40:66:0,40,1980:0,40,255:40,0 chr1 85014498 . G . PASS END=85014498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,8:67:32:67:0,32,1885:0,32,255:40,0 chr1 85014499 . A . PASS END=85014501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,3:69:99:69:0,120,1800:0,143,255:40,0 chr1 85014502 . C . PASS END=85014502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,8:71:8:71:0,8,2102:0,8,255:40,0 chr1 85014503 . A . PASS END=85014514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:91:71:0,91,1800:0,91,255:40,0 chr1 85014515 . A . PASS END=85014647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:61:0,120,1800:0,144,255:40,0 chr1 85016115 . A . PASS END=85016139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,150,255:40,0 chr1 85016140 . A . PASS END=85016176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,208,255:40,0 chr1 85016177 . A G, 50.00 PASS DP=76;MQ=248.86;MQRankSum=7.065;ReadPosRankSum=4.939;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,44,0:0.579,0.000:76:16,16,0:16,28,0:47:85,0,48,1537,1128,2665:255,0,255:31,0:5.0000e+01,7.8694e-05,5.0916e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,16,23,21:18,14,25,19 chr1 85016178 . G . PASS END=85016213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:62:0,120,1800:0,137,255:40,0 chr1 85018718 . A . PASS END=85018721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,2:113:99:112:0,120,1800:0,255,255:40,0 chr1 85018722 . G . PASS END=85018770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,1:128:99:113:0,120,1800:0,255,255:40,0 chr1 85018771 . G . LowGQ END=85018772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,15:133:0:128:0,0,3713:98,0,255:40,17 chr1 85018773 . A . PASS END=85018807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:126,1:127:99:95:0,120,1800:0,130,255:40,2 chr1 85020682 . T . PASS END=85020683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 85020684 . A . PASS END=85020685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,806:0,53,255:23,0 chr1 85020686 . C . PASS END=85020687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:26,0 chr1 85020688 . C . PASS END=85020882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1088:0,86,255:40,0 chr1 85028940 . T . PASS END=85028945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 85028946 . G . PASS END=85028947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 85028948 . T . PASS END=85028948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:21,0 chr1 85028949 . A . PASS END=85028954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 85028955 . A . PASS END=85028955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 85028956 . G . PASS END=85029094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:29:0,84,1102:0,86,255:40,0 chr1 85029095 . C . PASS END=85029096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:73:37:0,73,1333:0,73,255:28,0 chr1 85029097 . T . PASS END=85029097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:28,0 chr1 85029098 . G . PASS END=85029098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:28,0 chr1 85029099 . A . PASS END=85029099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:28,0 chr1 85029100 . T . PASS END=85029101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 85029418 . C . PASS END=85029515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:65:0,120,1800:0,165,255:40,0 chr1 85031524 . C . PASS END=85031695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:37:0,87,1291:0,87,255:40,0 chr1 85035614 . C . PASS END=85035812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:38:0,81,1215:0,99,255:40,1 chr1 85035813 . G . PASS END=85035813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 85035814 . A . PASS END=85035822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,83,255:29,0 chr1 85036265 . C . PASS END=85036276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,131,255:40,0 chr1 85036277 . C . PASS END=85036403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,153,255:40,0 chr1 85039865 . C . PASS END=85039868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 85039869 . C . PASS END=85039876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:27,0 chr1 85039877 . C . PASS END=85039887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 85039888 . G . PASS END=85039951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,916:0,81,255:31,0 chr1 85039952 . G . PASS END=85039954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 85039955 . G . PASS END=85039955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 85039956 . A . PASS END=85039965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1155:0,80,255:28,0 chr1 85039966 . C . PASS END=85039972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:24,0 chr1 85039973 . T . PASS END=85039997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:25:0,42,675:0,42,255:19,0 chr1 85039998 . CGCAGCGCCA C, 50.00 PASS DP=26;MQ=246.66;MQRankSum=2.540;ReadPosRankSum=0.635;FractionInformativeReads=0.615;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,9,0:0.562,0.000:16:4,5,0:3,4,0:48:79,0,49,379,294,673:196,0,255:7,10:5.0000e+01,6.8857e-05,5.2308e+01,3.8484e+02,3.2870e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:2,5,1,8:3,4,5,4 chr1 85039999 . G . LowGQ END=85040008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,11:28:0:24:0,0,228:183,0,255:14,10 chr1 85040009 . C . PASS END=85040023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 85040024 . C . LowGQ END=85040024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:26,0,255:14,0 chr1 85040025 . A . PASS END=85040025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 85040026 . G . PASS END=85040026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:13,0 chr1 85040027 . C . LowGQ END=85040028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:0,0,255:14,0 chr1 85040029 . G . PASS END=85040029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,498:0,17,255:14,0 chr1 85040030 . C . PASS END=85040035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 85040036 . A . PASS END=85040036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 85040037 . C . PASS END=85040044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 85040045 . G . LowGQ END=85040045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,455:7,0,255:13,0 chr1 85040046 . C . PASS END=85040050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 85040051 . C . PASS END=85040052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 85040053 . G . PASS END=85040053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 85040054 . C . PASS END=85040054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:8,0 chr1 85040055 . G . PASS END=85040059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:16:0,24,360:0,48,255:9,0 chr1 85040060 . A . PASS END=85040064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 85040065 . C . PASS END=85040072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 85040073 . C . PASS END=85040088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:8,0 chr1 85040089 . G . PASS END=85040089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 85040090 . C . PASS END=85040093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 85040094 . G . PASS END=85040098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 85113116 . C . PASS END=85113165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:40:0,90,1313:0,90,255:40,0 chr1 85113166 . A . PASS END=85113202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,138,255:40,0 chr1 85113203 . T C, 242.63 PASS DP=65;MQ=248.55;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,65,0:1.000,0.000:65:0,37,0:0,28,0:193:280,196,0,2502,196,2502:255,196,0:0,0:2.4263e+02,1.9263e+02,0.0000e+00,4.5000e+02,2.2740e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,36:0,0,33,32 chr1 85113204 . G . PASS END=85113228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,167,255:40,0 chr1 85113229 . A G, 50.00 PASS DP=63;MQ=249.28;MQRankSum=6.792;ReadPosRankSum=3.827;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,34,0:0.540,0.000:63:14,22,0:15,12,0:48:85,0,50,1114,1000,2114:255,0,255:27,0:5.0000e+01,6.7563e-05,5.2538e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,18,10,24:14,15,20,14 chr1 85113230 . T . PASS END=85113266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,114,1710:0,120,255:40,0 chr1 85113267 . G . PASS END=85113290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,94,255:38,0 chr1 85115619 . T . PASS END=85115629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,129,255:40,0 chr1 85115630 . C . PASS END=85115630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1323:0,68,255:38,0 chr1 85115631 . C . PASS END=85115631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,134,255:40,0 chr1 85116008 . T . PASS END=85116210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:85:41:0,85,1504:0,85,255:40,0 chr1 85117566 . T . PASS END=85117680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:51:0,120,1800:0,149,255:40,0 chr1 85121148 . T . PASS END=85121150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 85121151 . T . PASS END=85121151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 85121152 . T . PASS END=85121154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 85121155 . A . PASS END=85121155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:59:20:0,59,559:0,59,255:20,0 chr1 85121156 . C . PASS END=85121156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 85121157 . A . PASS END=85121157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 85121158 . G . PASS END=85121159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 85121160 . A . PASS END=85121161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 85121162 . A . PASS END=85121163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 85121164 . A . PASS END=85121164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 85121165 . T . PASS END=85121170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,878:0,61,255:26,0 chr1 85121171 . T . PASS END=85121179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 85121180 . T . PASS END=85121180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 85121181 . G . PASS END=85121217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1178:0,83,255:40,0 chr1 85121218 . A . PASS END=85121254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1213:0,81,255:37,0 chr1 85121255 . A G, 9.58 DRAGENSnpHardQUAL DP=37;MQ=250.00;MQRankSum=3.811;ReadPosRankSum=3.811;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,6,0:0.162,0.000:37:16,4,0:15,2,0:10:44,0,50,186,1051,1237:99,0,255:24,0:9.5798e+00,5.0690e-01,5.3507e+01,1.8635e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,13,2,4:13,18,2,4 chr1 85121256 . G . PASS END=85121271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1166:0,88,255:32,0 chr1 85121515 . C . PASS END=85121679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:32:0,87,1174:0,88,255:40,0 chr1 85121680 . G . PASS END=85121688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,80,255:25,0 chr1 85122031 . C . PASS END=85122167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:55:0,120,1800:0,149,255:40,0 chr1 85124001 . C . PASS END=85124151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:90:37:0,90,1350:0,98,255:40,0 chr1 85127881 . A . PASS END=85128058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,120,1800:0,137,255:40,0 chr1 85128138 . C . PASS END=85128213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,117,1800:0,117,255:40,2 chr1 85130100 . C . PASS END=85130235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:52:0,107,1800:0,107,255:40,0 chr1 85131802 . C . PASS END=85131915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:94:37:0,94,1258:0,94,255:40,0 chr1 85135364 . C . PASS END=85135381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,889:0,61,255:26,0 chr1 85135382 . G . PASS END=85135576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:36:0,92,1318:0,92,255:40,0 chr1 85136329 . C . PASS END=85136329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 85136330 . T . PASS END=85136330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 85136331 . G . PASS END=85136498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:28:0,81,1215:0,84,255:40,0 chr1 85136860 . C . PASS END=85136902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:46:0,120,1800:0,120,255:40,0 chr1 85279529 . T . PASS END=85279540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 85279541 . T . PASS END=85279541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 85279542 . T . PASS END=85279548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:25,0 chr1 85279549 . A . PASS END=85279557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 85279558 . C . PASS END=85279560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,848:0,64,255:26,0 chr1 85279561 . G . PASS END=85279562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 85279563 . C . PASS END=85279563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:28,0 chr1 85279564 . T . PASS END=85279564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 85279565 . A . PASS END=85279565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 85279566 . A . PASS END=85279568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 85279569 . C . PASS END=85279571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr1 85279572 . T . PASS END=85279572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:26,0 chr1 85279573 . C . PASS END=85279632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1349:0,81,255:38,0 chr1 85279633 . G . PASS END=85279633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:35,0 chr1 85279634 . A . PASS END=85279701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1164:0,83,255:37,0 chr1 85279702 . C . PASS END=85279708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:26,0 chr1 85279709 . G . PASS END=85279710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 85279711 . A . PASS END=85279733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 85279734 . G . PASS END=85279738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 85279739 . G . PASS END=85279739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:25,0 chr1 85279740 . A . PASS END=85279772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 85279773 . T . PASS END=85279776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 85279777 . G . PASS END=85279777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1084:0,55,255:25,0 chr1 85279778 . C . PASS END=85279789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr1 85279790 . C . PASS END=85279791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 85279792 . T . PASS END=85279804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 85279805 . G . PASS END=85279808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 85279809 . A . PASS END=85279854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,775:0,60,255:26,0 chr1 85331068 . C . PASS END=85331075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 85331076 . G . PASS END=85331079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 85331080 . T . PASS END=85331080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 85331081 . C . PASS END=85331093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1093:0,90,255:31,0 chr1 85331094 . A . PASS END=85331094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 85331095 . G . PASS END=85331210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:31:0,82,1125:0,82,255:40,0 chr1 85331211 . G . PASS END=85331211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:28,0 chr1 85331212 . C . PASS END=85331214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 85331215 . T . PASS END=85331216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 85331217 . A . PASS END=85331232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1149:0,83,255:31,0 chr1 85331233 . A . PASS END=85331233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 85331234 . G . PASS END=85331237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 85331238 . A . PASS END=85331238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 85331239 . C . PASS END=85331519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1200:0,81,255:40,0 chr1 85331520 . T . PASS END=85331520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1543:0,77,255:40,0 chr1 85331521 . T . PASS END=85331662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,120,1800:0,124,255:40,0 chr1 85331663 . A . PASS END=85331663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:76:66:0,76,1999:0,76,255:40,1 chr1 85331664 . G . PASS END=85331765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:38:0,81,1272:0,81,255:40,2 chr1 85331766 . A . PASS END=85331778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:60:38:0,60,900:0,86,255:26,0 chr1 85331779 . G . PASS END=85331785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:42:39:0,42,630:0,101,255:19,0 chr1 85331786 . A . PASS END=85331792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:30:36:0,30,450:0,97,255:13,0 chr1 85331793 . C . PASS END=85331794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:27:36:0,27,405:0,91,255:9,0 chr1 85331795 . C . PASS END=85331797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:15:35:0,15,225:0,105,255:5,0 chr1 85331798 . A . LowGQ END=85331807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:33,0:33:0:30:0,0,0:0,90,255:3,0 chr1 85331808 . G GAGA, 131.19 PASS DP=30;MQ=250.00;FractionInformativeReads=0.933 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,17,0:0,11,0:81:163,84,0,1260,84,1260:255,0,104:0,32:1.3119e+02,8.1190e+01,0.0000e+00,4.5000e+02,1.1605e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,9,19:0,0,12,16 chr1 85331809 . A . LowGQ END=85331809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,25:30:0:30:0,0,0:255,0,81:24,0 chr1 85331810 . G . PASS END=85331813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:24,0 chr1 85331814 . T . LowGQ END=85331816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:29:0,0,713:7,0,255:23,0 chr1 85331817 . A . PASS END=85331817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:14:28:0,14,803:0,14,255:23,0 chr1 85331818 . C . PASS END=85331818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:23,0 chr1 85350456 . C . PASS END=85350470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1280:0,94,255:37,0 chr1 85392368 . T . PASS END=85392404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:83:0,120,1800:0,231,255:40,0 chr1 85395241 . C . PASS END=85395362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,111,1374:0,111,255:40,0 chr1 85397045 . C . PASS END=85397046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 85397047 . T . PASS END=85397047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:37,0 chr1 85397048 . A . PASS END=85397250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:37:0,84,1246:0,94,255:40,0 chr1 85397251 . A . PASS END=85397251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1037:0,60,255:26,0 chr1 85403438 . C . PASS END=85403560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:30:0,90,1103:0,90,255:40,0 chr1 85403664 . A . PASS END=85403765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,169,255:40,0 chr1 85405236 . C . PASS END=85405237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1112:0,99,255:33,0 chr1 85405238 . T G, 46.05 PASS DP=34;MQ=250.00;MQRankSum=4.820;ReadPosRankSum=0.461;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,13,0:0.382,0.000:34:8,7,0:13,6,0:45:81,0,50,465,714,1179:255,0,255:21,0:4.6047e+01,1.2969e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,9,4:7,14,7,6 chr1 85405239 . T . PASS END=85405275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:34:0,102,1258:0,102,255:40,0 chr1 85405276 . G . PASS END=85405368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:31:0,80,1177:0,80,255:40,0 chr1 85405369 . A . PASS END=85405374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,73,255:23,0 chr1 85405375 . T . PASS END=85405375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,986:0,43,255:23,0 chr1 85405376 . T . PASS END=85405385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,71,255:25,0 chr1 85406562 . C . PASS END=85406674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:37:0,99,1485:0,103,255:40,0 chr1 85412716 . T . PASS END=85412815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:75:0,120,1800:0,187,255:40,0 chr1 85417926 . C . PASS END=85418022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,152,255:40,0 chr1 85418129 . C . PASS END=85418208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:40:0,81,1215:0,89,255:40,0 chr1 85418209 . A . PASS END=85418213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:63:36:0,63,945:0,75,255:22,0 chr1 85422114 . C . PASS END=85422267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:44:0,111,1665:0,119,255:40,0 chr1 85424212 . C . PASS END=85424219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,104,1345:0,104,255:40,0 chr1 85424220 . T . PASS END=85424385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:93:40:0,93,1350:0,93,255:40,0 chr1 85431232 . C . PASS END=85431232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 85431233 . T . PASS END=85431233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 85431234 . G . PASS END=85431251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1260:0,87,255:36,0 chr1 85431252 . T . PASS END=85431252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr1 85431253 . C . PASS END=85431355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1104:0,81,255:40,0 chr1 85431356 . T . PASS END=85431356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:31,0 chr1 85431357 . C . PASS END=85431370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,89,255:32,0 chr1 85431371 . T . PASS END=85431380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,65,255:25,0 chr1 85431381 . C . PASS END=85431391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,63,255:17,0 chr1 85462479 . C . PASS END=85462544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:45:0,94,1651:0,94,255:40,0 chr1 85462545 . T . PASS END=85462555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,120,1800:0,143,255:40,0 chr1 85484806 . C . PASS END=85484806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1500:0,112,255:40,0 chr1 85484807 . T . PASS END=85484807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1305:0,79,255:38,0 chr1 85484808 . A . PASS END=85484940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,111,1524:0,111,255:40,0 chr1 85486753 . C . PASS END=85486959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:32:0,84,1260:0,96,255:40,0 chr1 85487753 . C . PASS END=85487756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 85487757 . T . PASS END=85487757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 85487758 . C . PASS END=85487760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr1 85487761 . G . PASS END=85487774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,864:0,66,255:25,0 chr1 85487775 . A . PASS END=85487775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 85487776 . C . PASS END=85487778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 85487779 . T . PASS END=85487789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 85487790 . A . PASS END=85487790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 85487791 . A . PASS END=85487792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 85487793 . C . PASS END=85487793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 85487794 . A . PASS END=85487808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,989:0,84,255:29,0 chr1 85487809 . T . PASS END=85487809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,991:0,48,255:26,0 chr1 85487810 . C . PASS END=85487811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 85487812 . T . PASS END=85487813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr1 85487814 . G . PASS END=85487815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 85487816 . T . PASS END=85487816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 85487817 . G . PASS END=85487817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 85487818 . C . PASS END=85487819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 85487820 . C . PASS END=85487820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 85487821 . A . PASS END=85487821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 85487822 . G . PASS END=85487826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 85487827 . A . PASS END=85487827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1001:0,59,255:27,0 chr1 85487828 . G . PASS END=85487828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 85487829 . A . PASS END=85487830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 85487831 . C . PASS END=85487837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 85487838 . A . PASS END=85487838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 85487839 . C . PASS END=85487840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 85487841 . T . PASS END=85487841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1039:0,41,255:29,0 chr1 85487842 . T . PASS END=85487875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1139:0,80,255:32,0 chr1 85487982 . G . PASS END=85488083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,105,1575:0,119,255:40,0 chr1 85491296 . T . PASS END=85491322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1153:0,93,255:40,0 chr1 85491323 . T . PASS END=85491466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:42:0,96,1440:0,126,255:40,0 chr1 85491622 . C . PASS END=85491771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:57:0,120,1800:0,156,255:40,0 chr1 85491834 . C . PASS END=85491967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:64:0,120,1800:0,191,255:40,0 chr1 85494789 . T . PASS END=85494888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,120,1800:0,150,255:40,0 chr1 85498379 . A . PASS END=85498382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 85498383 . A . PASS END=85498383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:29,0 chr1 85498384 . G . PASS END=85498475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:33:0,91,1304:0,91,255:40,0 chr1 85498555 . C . PASS END=85498639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:37:0,90,1537:0,90,255:40,0 chr1 85499781 . C . PASS END=85499917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,102,1530:0,116,255:40,0 chr1 85499918 . T . PASS END=85499934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:23:0,66,990:0,69,255:25,0 chr1 85502522 . T . PASS END=85502551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,105,1575:0,119,255:40,0 chr1 85506693 . C . PASS END=85506860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:82:36:0,82,1390:0,82,255:40,0 chr1 85510816 . C . PASS END=85511045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:41:0,80,1430:0,80,255:40,0 chr1 85513871 . C . PASS END=85513940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 85537625 . A . PASS END=85537688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:66:0,120,1800:0,186,255:40,0 chr1 85538737 . C . PASS END=85538775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:91:0,120,1800:0,201,255:40,1 chr1 85546917 . G . PASS END=85547082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:38:0,93,1395:0,114,255:40,0 chr1 85547083 . C . PASS END=85547083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:32,2 chr1 85547084 . A . PASS END=85547084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1357:0,48,255:32,2 chr1 85547085 . A . PASS END=85547085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:32,0 chr1 85547086 . A . PASS END=85547098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:34,0 chr1 85547983 . G . PASS END=85548087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:60:0,120,1800:0,141,255:40,0 chr1 85550229 . C . PASS END=85550378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:48:0,120,1800:0,137,255:40,0 chr1 85551514 . A . PASS END=85551713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,120,1800:0,157,255:40,0 chr1 85555799 . G . PASS END=85555915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:48:0,120,1800:0,137,255:40,0 chr1 85559141 . T . PASS END=85559164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:33:0,90,1350:0,99,255:40,0 chr1 85559165 . T . PASS END=85559331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:91:42:0,91,1395:0,91,255:40,0 chr1 85559457 . G . PASS END=85559489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,110,1551:0,110,255:40,0 chr1 85559490 . C . PASS END=85559515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:38:0,87,1305:0,113,255:40,0 chr1 85560114 . G . PASS END=85560226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:31:0,87,1257:0,89,255:40,0 chr1 85560227 . A . PASS END=85560238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:96:39:0,96,1440:0,107,255:36,0 chr1 85561614 . T . PASS END=85561703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:38:0,81,1215:0,89,255:40,0 chr1 85563252 . A . PASS END=85563338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:34:0,102,1266:0,102,255:40,0 chr1 85564213 . C . PASS END=85564341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,104,1407:0,104,255:40,0 chr1 85570207 . A . PASS END=85570280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,109,1760:0,109,255:40,0 chr1 85573716 . C . PASS END=85573748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,120,1800:0,126,255:40,0 chr1 85573749 . A . PASS END=85573860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,166,255:40,0 chr1 85575731 . G . PASS END=85575788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,139,255:40,0 chr1 85575789 . A . PASS END=85575818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:90:60:0,90,1800:0,90,255:40,0 chr1 85583412 . A . PASS END=85583542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:45:0,90,1350:0,118,255:40,0 chr1 85587434 . G . PASS END=85587497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:62:0,120,1800:0,170,255:40,0 chr1 85589804 . C . PASS END=85589894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:37:0,101,1229:0,101,255:40,0 chr1 85589895 . T . PASS END=85589923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:49:0,81,1215:0,116,255:40,0 chr1 85589924 . A . PASS END=85589927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:69:46:0,69,1035:0,114,255:25,0 chr1 85589928 . T . PASS END=85589934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:51:44:0,51,765:0,119,255:18,0 chr1 85592194 . A . PASS END=85592202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,629:0,41,255:19,0 chr1 85592203 . C . PASS END=85592210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,799:0,66,255:26,0 chr1 85592211 . G . PASS END=85592212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 85592213 . C . PASS END=85592213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 85592214 . A . PASS END=85592214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 85592215 . T . PASS END=85592215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:29,0 chr1 85592216 . G . PASS END=85592227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1111:0,80,255:31,0 chr1 85592228 . A . PASS END=85592228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:30,0 chr1 85592229 . A . PASS END=85592353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:33:0,88,1187:0,88,255:40,0 chr1 85592354 . T . PASS END=85592354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1251:0,75,255:36,0 chr1 85592355 . T . PASS END=85592371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1350:0,90,255:36,0 chr1 85592372 . C . PASS END=85592376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:26,0 chr1 85592377 . A . PASS END=85592377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:57:34:0,57,855:0,86,255:18,0 chr1 85592378 . T . PASS END=85592380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,61,255:20,0 chr1 85592381 . A . PASS END=85592382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:57:33:0,57,855:0,83,255:19,0 chr1 85592383 . C . PASS END=85592385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:20,0 chr1 85592386 . T . PASS END=85592398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:20,0 chr1 85594391 . C . PASS END=85594428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:46:0,111,1729:0,111,255:40,0 chr1 85594429 . A . PASS END=85594465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,150,255:40,0 chr1 85594466 . G A, 42.19 PASS DP=57;MQ=250.00;MQRankSum=6.178;ReadPosRankSum=4.138;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,20,0:0.351,0.000:57:21,11,0:16,9,0:42:77,0,50,670,1279,1949:255,0,255:34,0:4.2188e+01,2.8424e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,16,5,15:19,18,8,12 chr1 85594467 . C . PASS END=85594482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:53:0,113,1800:0,113,255:40,0 chr1 85595673 . A . PASS END=85595682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:54:0,120,1800:0,146,255:40,0 chr1 85595683 . T . PASS END=85595804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,157,255:40,0 chr1 85598538 . A . PASS END=85598573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,122,255:40,0 chr1 85598574 . G . PASS END=85598681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:91:43:0,91,1537:0,91,255:40,0 chr1 85624433 . T . PASS END=85624438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,134,255:40,0 chr1 85624439 . A . PASS END=85624439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:49:50:0,49,1136:0,49,255:40,0 chr1 85624440 . C . LowGQ END=85624440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,9:52:0:52:0,0,1124:53,0,255:40,0 chr1 85624441 . T . PASS END=85624443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,139,255:40,0 chr1 85624444 . T . PASS END=85624444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:61:53:0,61,1533:0,61,255:40,0 chr1 85624445 . A . PASS END=85624477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,109,1566:0,109,255:40,0 chr1 85624478 . A . PASS END=85624511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,148,255:40,0 chr1 85624512 . T . PASS END=85624548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,126,255:40,0 chr1 85624549 . C T, 287.30 PASS DP=81;MQ=249.56;FractionInformativeReads=0.988 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,80,0:1.000,0.000:80:0,46,0:0,34,0:237:325,240,0,3018,240,3018:255,246,0:0,0:2.8730e+02,2.3730e+02,0.0000e+00,4.5000e+02,2.7207e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,42:0,0,38,42 chr1 85624550 . T . PASS END=85624586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,153,255:40,0 chr1 85624587 . T . PASS END=85624826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:50:0,120,1800:0,137,255:40,1 chr1 85624827 . A . PASS END=85624863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,147,255:40,0 chr1 85624864 . G A, 233.59 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,24,0:0,38,0:184:271,187,0,2380,187,2380:255,186,0:0,0:2.3359e+02,1.8359e+02,0.0000e+00,4.5000e+02,2.1836e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,26:0,0,30,32 chr1 85624865 . A . PASS END=85624901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,147,255:40,0 chr1 85624902 . T . PASS END=85624932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,128,255:40,0 chr1 85625540 . T . PASS END=85625550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,253,255:40,0 chr1 85630209 . C . PASS END=85630440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:42:0,87,1509:0,87,255:40,0 chr1 85634727 . C . PASS END=85634908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,108,1369:0,109,255:40,0 chr1 85641913 . T . PASS END=85641977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:78:0,120,1800:0,224,255:40,0 chr1 85643825 . T . PASS END=85643825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 85643829 . C . PASS END=85643830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 85643831 . G . PASS END=85643844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:33,0 chr1 85643845 . A . PASS END=85643845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1156:0,68,255:32,0 chr1 85643846 . T . PASS END=85643946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,83,255:40,0 chr1 85643947 . G . PASS END=85643948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 85643949 . C . PASS END=85643955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,92,255:29,0 chr1 85647781 . C . PASS END=85648161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:90:36:0,90,1364:0,90,255:40,1 chr1 85648162 . G . PASS END=85648162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:33,0 chr1 85648163 . C . PASS END=85648582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:85:38:0,85,1275:0,85,255:40,0 chr1 85648583 . G . PASS END=85648619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,149,255:40,0 chr1 85648620 . C T, 209.06 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,24,0:0,30,0:159:247,162,0,2049,162,2049:255,162,0:0,0:2.0906e+02,1.5906e+02,0.0000e+00,4.5000e+02,1.9383e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,30:0,0,28,26 chr1 85648621 . T . PASS END=85648657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,143,255:40,0 chr1 85648658 . T . PASS END=85648867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:37:0,100,1620:0,100,255:40,0 chr1 85648868 . G . PASS END=85648879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1215:0,111,255:36,0 chr1 85648880 . G . PASS END=85648883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:25,0 chr1 85655740 . C . PASS END=85655742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:21:0,53,836:0,53,255:20,0 chr1 85655743 . C . PASS END=85655743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,714:0,14,255:20,0 chr1 85655744 . A . PASS END=85655746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,664:0,30,255:20,0 chr1 85655747 . A . PASS END=85655747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 85655748 . G . PASS END=85655748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 85655749 . G . PASS END=85655750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:22,0 chr1 85655751 . G . PASS END=85655752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,732:0,33,255:23,0 chr1 85655753 . T . PASS END=85655754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 85655755 . T . PASS END=85655757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 85655758 . A . PASS END=85655761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,842:0,42,255:24,0 chr1 85655762 . G . PASS END=85655764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:27:0,60,1125:0,60,255:30,0 chr1 85655765 . A . PASS END=85655765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 85655766 . C . PASS END=85655766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 85655767 . T . PASS END=85655767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 85655768 . G . PASS END=85655768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr1 85655769 . T . PASS END=85655772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,108,1289:0,108,255:38,0 chr1 85655773 . C . PASS END=85655773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:37,0 chr1 85655774 . C . PASS END=85656435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:38:0,90,1435:0,90,255:40,0 chr1 85665935 . C . PASS END=85665935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 85665936 . T . PASS END=85665941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr1 85665942 . C . PASS END=85665950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr1 85665951 . T . PASS END=85665951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 85665952 . T . PASS END=85665959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,543:0,45,255:19,0 chr1 85665960 . A . PASS END=85665960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 85665961 . G . PASS END=85665961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 85665962 . G . PASS END=85665968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 85665969 . C . PASS END=85665969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 85665970 . A . PASS END=85665976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:25,0 chr1 85665977 . G . PASS END=85665977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 85665978 . G . PASS END=85665988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,941:0,78,255:26,0 chr1 85665989 . C . PASS END=85665995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 85665996 . A . PASS END=85665996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 85665997 . G . PASS END=85666001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr1 85666002 . C . PASS END=85666023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr1 85666024 . G . PASS END=85666025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr1 85666026 . T . PASS END=85666026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 85666027 . C . PASS END=85666027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 85666028 . C . PASS END=85666028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 85666029 . T . PASS END=85666030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr1 85666031 . T . PASS END=85666031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 85666032 . G . PASS END=85666037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:51:30:0,51,1047:0,51,255:30,0 chr1 85666038 . G . PASS END=85666041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 85666042 . G . PASS END=85666045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr1 85666046 . T . PASS END=85666047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 85666048 . C . PASS END=85666050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr1 85666051 . C . PASS END=85666051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 85666052 . G . PASS END=85666054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:67:35:0,67,1266:0,67,255:32,0 chr1 85666055 . C . PASS END=85666055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 85666056 . A . PASS END=85666058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:32,0 chr1 85666059 . A . PASS END=85666059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:31,0 chr1 85666060 . C . PASS END=85666060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr1 85666061 . C . PASS END=85666111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1133:0,80,255:35,0 chr1 85666112 . T . PASS END=85666112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:30,0 chr1 85666113 . C . PASS END=85666113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 85666114 . T . PASS END=85666114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:29,0 chr1 85666115 . T . PASS END=85666118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 85666119 . T . PASS END=85666122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 85666123 . A . PASS END=85666123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 85666124 . C . PASS END=85666126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 85666127 . C . PASS END=85666127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 85666128 . C . PASS END=85666133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1117:0,93,255:31,0 chr1 85666134 . C . PASS END=85666134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 85666135 . C . PASS END=85666140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1178:0,93,255:31,0 chr1 85666141 . A . PASS END=85666141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:26,0 chr1 85666142 . A . PASS END=85666144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 85666145 . A . PASS END=85666148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 85666149 . G . PASS END=85666155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 85666156 . T G, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.219;ReadPosRankSum=1.249;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,20,0:0.690,0.000:29:6,7,0:3,13,0:43:85,0,41,707,322,1029:255,0,255:9,0:5.0000e+01,2.2832e-04,4.3711e+01,4.5000e+02,3.5665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,6,14:5,4,15,5 chr1 85666157 . G . PASS END=85666161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 85666162 . T . PASS END=85666177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 85666178 . G . PASS END=85666178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 85666179 . T . PASS END=85666193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:24:0,69,1035:0,72,255:24,0 chr1 85666194 . C . PASS END=85666209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 85666210 . G . PASS END=85666289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,576:0,40,255:19,0 chr1 85666290 . A . PASS END=85666310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,54,255:19,0 chr1 85666311 . T . PASS END=85666312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 85666313 . C . PASS END=85666326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 85666327 . T C, 49.84 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=2.817;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:5,4,0:5,5,0:48:85,0,50,289,350,638:255,0,255:7,0:4.9839e+01,6.6786e-05,5.3000e+01,2.8871e+02,3.8438e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,4,5:3,7,7,2 chr1 85666328 . C . PASS END=85666330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 85666331 . C . PASS END=85666337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:22,0 chr1 85666338 . C . PASS END=85666338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 85666339 . C . PASS END=85666364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 85666365 . G . PASS END=85666390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,730:0,63,255:22,0 chr1 85666391 . G . PASS END=85666393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 85666394 . G . PASS END=85666408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 85666409 . G . PASS END=85666446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 85666447 . C . PASS END=85666447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 85666448 . G . PASS END=85666460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 85666461 . C . PASS END=85666461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 85666462 . T . PASS END=85666464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 85666465 . C . PASS END=85666476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 85666477 . T . PASS END=85666478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 85666479 . C . PASS END=85666480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 85666481 . T . PASS END=85666490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:25:11:0,25,405:0,25,255:9,0 chr1 85666491 . C . PASS END=85666491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 85666492 . C . PASS END=85666496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 85666497 . C . PASS END=85666498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 85666499 . G . PASS END=85666511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 85666512 . C . PASS END=85666512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 85666513 . C . PASS END=85666520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 85666521 . T . PASS END=85666521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 85666522 . C . PASS END=85666526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr1 85666527 . G . PASS END=85666527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 85666528 . C . PASS END=85666529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 85666530 . T . PASS END=85666530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 85666531 . C . PASS END=85666532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 85666533 . C . PASS END=85666541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,249:5,0 chr1 85666542 . G . PASS END=85666542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:4,0 chr1 85666543 . T . PASS END=85666543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:5,0 chr1 85666544 . C . PASS END=85666544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 85666545 . C . PASS END=85666548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 85666549 . G . PASS END=85666552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 85666553 . A . PASS END=85666557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 85666558 . C . PASS END=85666558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 85666559 . G . PASS END=85666559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 85666560 . G . PASS END=85666564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,221:0,24,221:8,0 chr1 85666565 . A . PASS END=85666565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:8,0 chr1 85666566 . C . PASS END=85666574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,280:0,27,255:9,0 chr1 85666575 . G . PASS END=85666575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 85666576 . C . PASS END=85666590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,282:0,27,255:9,0 chr1 85666591 . C . PASS END=85666591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 85666592 . C . PASS END=85666601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,238:8,0 chr1 85666602 . G . PASS END=85666602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 85666603 . G . PASS END=85666608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 85666609 . G . PASS END=85666609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 85666610 . C . PASS END=85666610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 85666611 . G . PASS END=85666611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 85666612 . G . PASS END=85666614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 85666615 . A . PASS END=85666615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr1 85666616 . A . PASS END=85666623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,243:0,21,243:8,0 chr1 85666624 . T . PASS END=85666624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 85666625 . C . LowGQ END=85666626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,122:15,0,148:5,0 chr1 85666627 . G . PASS END=85666631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,213:6,0 chr1 85666632 . G . PASS END=85666632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:5,0 chr1 85666633 . C . PASS END=85666636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,210:5,0 chr1 85666637 . T . PASS END=85666637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 85666638 . G . PASS END=85666645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,180:5,0 chr1 85666646 . G . LowGQ END=85666646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,2:5:0:5:0,0,83:18,0,101:3,0 chr1 85666647 . C . PASS END=85666656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 85666657 . G . LowGQ END=85666657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 85666658 . A . PASS END=85666667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 85666668 . C . PASS END=85666668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 85666669 . A . PASS END=85666669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 85666670 . G . PASS END=85666670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 85666671 . G . PASS END=85666671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 85666672 . T . LowGQ END=85666672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:6,0 chr1 85666673 . C . PASS END=85666673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 85666674 . G . LowGQ END=85666674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,196:7,0,203:7,0 chr1 85666675 . T . PASS END=85666680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 85666681 . G . PASS END=85666686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 85666687 . A . LowGQ END=85666687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 85666688 . T . PASS END=85666688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 85666689 . C . PASS END=85666689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 85666690 . A . PASS END=85666690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 85666691 . G . PASS END=85666691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 85666692 . C . PASS END=85666692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 85666693 . A . PASS END=85666694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 85666695 . A . PASS END=85666695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 85666696 . T . PASS END=85666699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 85666700 . A . PASS END=85666700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 85666701 . G . PASS END=85666702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 85666703 . C . PASS END=85666703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 85666704 . C . PASS END=85666704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 85666705 . T . PASS END=85666732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 85666733 . T . PASS END=85666733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 85666734 . C . PASS END=85666738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 85666739 . G . PASS END=85666739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 85666740 . G . PASS END=85666758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 85666759 . A . PASS END=85666759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 85666760 . G . PASS END=85666761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 85666762 . G . PASS END=85666762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 85666763 . A . PASS END=85666775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,676:0,54,255:18,0 chr1 85666776 . T . PASS END=85666818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 85666819 . T . PASS END=85666819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 85666820 . C . PASS END=85666828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 85666829 . A . PASS END=85666829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 85666830 . C . PASS END=85666830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 85666831 . T . PASS END=85666831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,316:0,3,255:9,0 chr1 85666832 . G . PASS END=85666848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:12,0 chr1 85666849 . T . PASS END=85666885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 85666886 . T C, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.700;ReadPosRankSum=0.849;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,9,0:0.692,0.000:13:1,7,0:3,2,0:46:85,0,46,321,135,456:255,0,100:3,0:5.0000e+01,1.0199e-04,4.8711e+01,3.2134e+02,1.6990e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,3,6:2,2,5,4 chr1 85666887 . G . PASS END=85666902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr1 85666903 . T . LowGQ END=85666903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:9,0 chr1 85666904 . C . PASS END=85666911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 85666912 . T C, 80.11 PASS DP=11;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,6,0:0,5,0:30:118,33,0,426,33,426:255,33,0:0,0:8.0111e+01,3.0111e+01,4.2365e-03,4.2342e+02,6.4881e+01,4.2641e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,7:0,0,7,4 chr1 85666913 . C . PASS END=85666914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 85666915 . T . PASS END=85666915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 85666916 . C . PASS END=85666918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 85666919 . A . PASS END=85666921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 85666922 . C . PASS END=85666949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 85666950 . G . PASS END=85666982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,419:0,36,255:13,0 chr1 85666983 . G . PASS END=85666983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr1 85666984 . C . PASS END=85666998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 85666999 . C . PASS END=85667029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,476:0,42,255:16,0 chr1 85667030 . C . PASS END=85667030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 85667031 . G . PASS END=85667078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,558:0,45,255:18,0 chr1 85667079 . C . PASS END=85667081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 85667082 . T . PASS END=85667084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 85667085 . G . PASS END=85667103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 85667104 . G . PASS END=85667121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 85667122 . G . PASS END=85667125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 85667126 . C . PASS END=85667131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 85667132 . C . PASS END=85667133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 85667134 . C . PASS END=85667134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 85667135 . C . PASS END=85667169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,32,255:13,0 chr1 85667170 . A . PASS END=85667170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 85667171 . C . PASS END=85667171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 85667172 . C . PASS END=85667188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 85667189 . C . PASS END=85667189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 85667190 . C . PASS END=85667191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 85667192 . G . PASS END=85667192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 85667193 . G . PASS END=85667194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 85667195 . G . PASS END=85667203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 85667204 . C . PASS END=85667217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 85667218 . G . PASS END=85667218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,441:0,3,255:12,0 chr1 85667219 . G . PASS END=85667219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 85667220 . A . PASS END=85667220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 85667221 . C . PASS END=85667221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 85667222 . C . PASS END=85667226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 85667227 . C . PASS END=85667228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:13,0 chr1 85667229 . T . PASS END=85667233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 85667234 . G . PASS END=85667235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 85667236 . A . PASS END=85667240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 85667241 . G . PASS END=85667241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 85667242 . G . PASS END=85667270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr1 85718312 . C . PASS END=85718385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,180,255:40,0 chr1 85723126 . T . PASS END=85723154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,203,255:40,0 chr1 85724127 . T . PASS END=85724373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:37:0,98,1365:0,98,255:40,0 chr1 85724374 . T . PASS END=85724374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:32,0 chr1 85724375 . T . PASS END=85724392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1135:0,85,255:34,0 chr1 85724393 . A . PASS END=85724393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:30,0 chr1 85724394 . T . PASS END=85724399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 85724400 . T . PASS END=85724400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:28,0 chr1 85724401 . G . PASS END=85724405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:30,0 chr1 85725041 . C . PASS END=85725054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:16,0 chr1 85725055 . T . PASS END=85725055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 85725056 . G . PASS END=85725069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,599:0,48,255:18,0 chr1 85725070 . C . PASS END=85725097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 85725098 . G . PASS END=85725101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:22,0 chr1 85725102 . A . PASS END=85725102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 85725103 . G . PASS END=85725109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 85725110 . C . PASS END=85725115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 85725116 . A . PASS END=85725122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 85725123 . C . PASS END=85725160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1148:0,87,255:34,0 chr1 85725161 . C . PASS END=85725161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 85725162 . G . PASS END=85725196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1372:0,102,255:36,0 chr1 85725197 . A . PASS END=85725197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:32,0 chr1 85725198 . T . PASS END=85725223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1257:0,89,255:34,0 chr1 85725224 . C . PASS END=85725224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 85725225 . G . PASS END=85725227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 85725228 . T . PASS END=85725230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 85725231 . A . PASS END=85725261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1216:0,83,255:31,0 chr1 85725262 . T . PASS END=85725291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 85725292 . G . PASS END=85725306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,765:0,54,255:19,0 chr1 85725307 . C . PASS END=85725316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 85733310 . T . PASS END=85733320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,550:0,45,255:19,0 chr1 85733321 . A . PASS END=85733321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 85733322 . A . PASS END=85733322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 85733323 . A . PASS END=85733336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:24,0 chr1 85733337 . T . PASS END=85733349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr1 85733350 . A . PASS END=85733350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 85733351 . T . PASS END=85733364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,842:0,65,255:26,0 chr1 85733365 . G . PASS END=85733366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 85733367 . A . PASS END=85733373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 85733374 . C T, 39.04 PASS DP=29;MQ=250.00;MQRankSum=4.336;ReadPosRankSum=4.336;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,10,0:0.345,0.000:29:9,6,0:10,4,0:39:74,0,50,300,671,971:255,0,255:16,0:3.9040e+01,5.6357e-04,5.3001e+01,2.9956e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,7,3:13,6,5,5 chr1 85733375 . C . PASS END=85733380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 85733381 . C . PASS END=85733381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 85733382 . T . PASS END=85733382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 85733383 . T . PASS END=85733405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1027:0,80,255:30,0 chr1 85733406 . A . PASS END=85733406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 85733407 . G . PASS END=85733411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1125:0,90,255:31,0 chr1 85733412 . A . PASS END=85733476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1194:0,83,255:35,0 chr1 85733477 . C . PASS END=85733477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr1 85733478 . T . PASS END=85733478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 85733479 . T . PASS END=85733479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:36,0 chr1 85733480 . C . PASS END=85733482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1410:0,101,255:36,0 chr1 85733483 . G . PASS END=85733483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 85733484 . A . PASS END=85733665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1208:0,81,255:40,0 chr1 85736301 . C . PASS END=85736301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 85736302 . T . PASS END=85736304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 85736305 . C . PASS END=85736305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 85736306 . A . PASS END=85736308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:26,0 chr1 85736309 . T . PASS END=85736309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr1 85736310 . G . PASS END=85736310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 85736311 . T . PASS END=85736311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 85736312 . T . PASS END=85736312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 85736313 . C . PASS END=85736316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:31,0 chr1 85736317 . T . PASS END=85736317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1007:0,79,255:30,0 chr1 85736318 . T . PASS END=85736322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1170:0,93,255:31,0 chr1 85736323 . A . PASS END=85736323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:30,0 chr1 85736324 . T . PASS END=85736325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 85736326 . T . PASS END=85736326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 85736327 . C . PASS END=85736327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 85736328 . T . PASS END=85736328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 85736329 . A . PASS END=85736336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 85736337 . G . PASS END=85736337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1124:0,60,255:30,0 chr1 85736338 . C . PASS END=85736555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:33:0,80,1395:0,80,255:40,0 chr1 85736556 . T . PASS END=85736556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1265:0,76,255:34,0 chr1 85736557 . C . PASS END=85736566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:40:0,84,1260:0,120,255:37,0 chr1 85736567 . T . PASS END=85736589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:26,0 chr1 85736591 . T . PASS END=85736591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 85740846 . C . PASS END=85740848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,140,255:40,0 chr1 85741483 . T . PASS END=85741626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1164:0,87,255:40,0 chr1 85741627 . T . PASS END=85741627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 85741628 . G . PASS END=85741629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 85741630 . C . PASS END=85741635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 85741636 . G . PASS END=85741639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 85741640 . A . PASS END=85741640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 85741641 . A . PASS END=85741668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr1 85741669 . T . PASS END=85741679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:28:0,74,1078:0,74,255:26,0 chr1 85741680 . C . PASS END=85741682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 85741683 . G . PASS END=85741698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 85741793 . T . PASS END=85741796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 85741797 . T . PASS END=85741802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 85741803 . A . PASS END=85741810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 85741811 . C . PASS END=85741811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 85741812 . A . PASS END=85741812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 85741813 . C . PASS END=85741814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 85741815 . A . PASS END=85741815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 85741816 . A . PASS END=85741820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:21,0 chr1 85741821 . C . PASS END=85741821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 85741822 . C . PASS END=85741835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:23,0 chr1 85741836 . T . PASS END=85741836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 85741837 . C . PASS END=85741875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,900:0,61,255:25,0 chr1 85741876 . A . PASS END=85741876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:19,0 chr1 85741877 . C . PASS END=85741877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 85741878 . C . PASS END=85741878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr1 85741879 . T . PASS END=85741879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 85741880 . G . PASS END=85741880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:18,0 chr1 85741881 . G . PASS END=85741882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 85741883 . G . PASS END=85741883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 85741884 . G . PASS END=85741895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 85741896 . C . PASS END=85741898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 85741899 . C . PASS END=85741902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 85741903 . C . PASS END=85741913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,746:0,63,255:21,0 chr1 85741914 . C . PASS END=85741914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 85741915 . G . PASS END=85741920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,725:0,63,255:22,0 chr1 85741921 . G C, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=1.263;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,14,0:0.636,0.000:22:5,6,0:3,8,0:47:85,0,46,501,286,787:255,0,244:8,0:5.0000e+01,9.3190e-05,4.9400e+01,4.5000e+02,3.2087e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,7,7:4,4,7,7 chr1 85741922 . T . PASS END=85741928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr1 85741929 . C . PASS END=85741929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 85741930 . T . PASS END=85741930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 85741933 . G . PASS END=85741937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 85741938 . A . PASS END=85741939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 85741940 . C . PASS END=85741952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:25,0 chr1 85741953 . G . PASS END=85741953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 85741954 . C . PASS END=85741958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,842:0,64,255:26,0 chr1 85741959 . G . PASS END=85741959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 85741960 . G . PASS END=85741964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 85741965 . G . PASS END=85741976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,902:0,64,255:26,0 chr1 85741977 . A . PASS END=85741977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:25,0 chr1 85741978 . C . PASS END=85741984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:25,0 chr1 85741985 . C . PASS END=85741985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:23,0 chr1 85741986 . T . PASS END=85741993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr1 85741994 . A . PASS END=85741994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 85741995 . G . PASS END=85742031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,939:0,72,255:26,0 chr1 85742032 . C . PASS END=85742032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 85742033 . C . PASS END=85742035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 85787135 . T . PASS END=85787151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,135,255:40,0 chr1 85787152 . T . PASS END=85787251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:40:0,93,1403:0,93,255:40,0 chr1 85790423 . C . PASS END=85790426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 85790427 . G . PASS END=85790427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 85790428 . C . PASS END=85790428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 85790429 . A . PASS END=85790429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 85790430 . C . PASS END=85790431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 85790432 . T . PASS END=85790432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 85790433 . T . PASS END=85790440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 85790441 . C . PASS END=85790441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 85790442 . T . PASS END=85790443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,956:0,84,255:30,0 chr1 85790444 . T . PASS END=85790444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 85790445 . T . PASS END=85790566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:31:0,83,1141:0,83,255:40,0 chr1 85816098 . C . PASS END=85816205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1072:0,87,255:40,0 chr1 85816206 . G . PASS END=85816217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr1 85817189 . C . PASS END=85817247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,149,255:40,0 chr1 85817248 . C . PASS END=85817262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:76:0,120,1800:0,201,255:40,0 chr1 85824431 . C . PASS END=85824530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,165,255:40,0 chr1 85826132 . C . PASS END=85826134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:84:0,120,1800:0,253,255:40,0 chr1 85870064 . C . PASS END=85870066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:62:0,120,1800:0,173,255:40,0 chr1 85930179 . C . PASS END=85930179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 85930180 . T . PASS END=85930180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:5:26:0,5,567:0,5,255:22,0 chr1 85930181 . G . PASS END=85930182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,80,255:26,0 chr1 85930183 . C . PASS END=85930183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr1 85930184 . C . PASS END=85930189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,881:0,62,255:26,0 chr1 85930190 . C . PASS END=85930190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 85930191 . G . PASS END=85930191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,909:0,57,255:26,0 chr1 85930192 . T . PASS END=85930192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:4:30:0,4,832:0,4,255:25,0 chr1 85930193 . A . PASS END=85930196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 85930197 . C . PASS END=85930197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:26,0 chr1 85930198 . C . PASS END=85930200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 85930201 . A . PASS END=85930201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,878:0,40,255:25,0 chr1 85930202 . T . PASS END=85930202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,976:0,70,255:26,0 chr1 85930426 . C . PASS END=85930426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 85930427 . T . PASS END=85930430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 85930431 . T . PASS END=85930431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 85930432 . C . PASS END=85930456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 85930457 . G . PASS END=85930457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 85930458 . T . PASS END=85930469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr1 85930470 . T . PASS END=85930475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 85930476 . C . PASS END=85930482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 85930483 . C . PASS END=85930483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 85930484 . A . PASS END=85930487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 85930488 . C . PASS END=85930488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 85930489 . C . PASS END=85930489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 85930490 . A . PASS END=85930490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 85930491 . C . PASS END=85930497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 85930498 . C . PASS END=85930498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 85930499 . A . PASS END=85930508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 85930509 . A . PASS END=85930509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:13,0 chr1 85930510 . G . PASS END=85930510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 85930511 . T . PASS END=85930512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 85930513 . C . PASS END=85930515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 85930516 . A . PASS END=85930516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:13,0 chr1 85930517 . A . PASS END=85930526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 85930527 . C . PASS END=85930527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 85930528 . G . PASS END=85930532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 85930533 . G . PASS END=85930536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 85930537 . C . PASS END=85930537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 85930538 . T . PASS END=85930545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 85930546 . C . PASS END=85930546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr1 85930547 . T . PASS END=85930549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 85930550 . A . PASS END=85930561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,402:0,20,255:9,0 chr1 85930562 . C . PASS END=85930564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 85930565 . C . PASS END=85930565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 85930566 . C . PASS END=85930566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 85930567 . C . PASS END=85930567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 85930568 . A . PASS END=85930571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 85930572 . C . PASS END=85930584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:10:0,23,360:0,23,255:9,0 chr1 85930585 . C . PASS END=85930585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 85930586 . T . PASS END=85930586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 85930587 . G . PASS END=85930587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 85930588 . G . PASS END=85930597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 85930598 . T . PASS END=85930599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 85930600 . C . PASS END=85930602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 85930603 . G . PASS END=85930612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 85930613 . T . PASS END=85930613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 85930614 . C . PASS END=85930619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 85930620 . C . PASS END=85930620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 85930621 . C . PASS END=85930626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 85930627 . C . PASS END=85930627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr1 85930628 . T . PASS END=85930628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 85930629 . T . PASS END=85930631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:6,0 chr1 85930632 . C . PASS END=85930635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 85930636 . T . PASS END=85930637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 85930638 . T . PASS END=85930642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 85930643 . G . PASS END=85930643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 85930644 . C . PASS END=85930647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 85930648 . C . PASS END=85930648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 85930649 . T . PASS END=85930651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 85930652 . C . PASS END=85930652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 85930653 . C . PASS END=85930709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 85930710 . G . PASS END=85930728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,202:6,0 chr1 86043667 . C . PASS END=86043684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:48:0,120,1800:0,123,255:40,0 chr1 86046668 . A . PASS END=86046699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1125:0,82,255:33,0 chr1 86046700 . A . PASS END=86046700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:30,0 chr1 86046701 . G . PASS END=86046730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1178:0,83,255:32,0 chr1 86047048 . G . PASS END=86047100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 86047101 . C . PASS END=86047107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 86047108 . G . PASS END=86047108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 86047109 . G . PASS END=86047109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 86047110 . A . PASS END=86047110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 86047111 . G . PASS END=86047113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 86047114 . G . PASS END=86047114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 86047115 . G . PASS END=86047126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:21,0 chr1 86047127 . A . PASS END=86047158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,675:0,41,255:19,0 chr1 86047159 . C . PASS END=86047166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 86047167 . C . PASS END=86047172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 86047173 . C . PASS END=86047180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 86047181 . A . PASS END=86047183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,729:0,47,255:19,0 chr1 86047184 . C . PASS END=86047187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 86047188 . G . PASS END=86047188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 86047189 . C . PASS END=86047197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 86047198 . C . PASS END=86047199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 86047200 . C . PASS END=86047221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 86047222 . T . PASS END=86047244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,674:0,44,255:19,0 chr1 86047245 . G . PASS END=86047247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 86047248 . G . PASS END=86047261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,668:0,46,255:18,0 chr1 86047611 . C . PASS END=86047614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 86047615 . G . PASS END=86047633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 86047634 . G . PASS END=86047651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1056:0,84,255:32,0 chr1 86047652 . T . PASS END=86047652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:31,0 chr1 86047653 . A . PASS END=86047750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1097:0,83,255:38,0 chr1 86047751 . C . PASS END=86047751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:35,0 chr1 86047752 . T . PASS END=86047785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,83,255:35,0 chr1 86047786 . C . PASS END=86047786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr1 86047787 . A . PASS END=86047789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 86047790 . G . PASS END=86047790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 86047791 . T . PASS END=86047792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 86047793 . A . PASS END=86047793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr1 86047794 . C . PASS END=86047838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:29:0,87,1035:0,87,255:35,0 chr1 86047839 . A . PASS END=86047842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:34:0,78,1170:0,91,255:26,0 chr1 86047843 . C . PASS END=86047869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1139:0,80,255:33,0 chr1 86047870 . T . PASS END=86047873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,1133:0,60,255:26,0 chr1 86047874 . A . PASS END=86047876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:51:30:0,51,1025:0,51,255:26,0 chr1 86047877 . G . PASS END=86047877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 86047878 . A . PASS END=86047878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:27,0 chr1 86047879 . G . PASS END=86047879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 86047880 . C . PASS END=86047886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:43:29:0,43,935:0,43,255:28,0 chr1 86047887 . T . PASS END=86047887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 86047888 . C . PASS END=86047888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 86047889 . G . PASS END=86047889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:28,0 chr1 86047890 . A . PASS END=86047891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 86047892 . G . PASS END=86047892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 86047893 . C . PASS END=86047896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 86047897 . C . PASS END=86047897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 86047898 . G . PASS END=86047904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 86047905 . A . PASS END=86047905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 86047906 . G . PASS END=86047906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 86047907 . T . PASS END=86047907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,957:0,76,255:27,0 chr1 86047908 . T . PASS END=86047914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 86047915 . A . PASS END=86047918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 86047919 . A . PASS END=86047919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 86047920 . A . PASS END=86047924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 86047925 . T . PASS END=86047932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr1 86047933 . A . PASS END=86047933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 86047934 . G . PASS END=86047935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 86047936 . T . PASS END=86047936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:25,0 chr1 86047937 . G . PASS END=86047947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 86047948 . C . PASS END=86047948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 86047949 . T . PASS END=86047962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:28,0 chr1 86047963 . C . PASS END=86047964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 86047965 . C . PASS END=86047967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 86048099 . T . PASS END=86048307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:36:0,93,1338:0,103,255:40,0 chr1 86048423 . A . PASS END=86048696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:40:0,94,1405:0,94,255:40,0 chr1 86048697 . T . PASS END=86048697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:32,0 chr1 86048698 . C . PASS END=86048720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1196:0,85,255:33,0 chr1 86048721 . A . PASS END=86048723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:46:32:0,46,984:0,46,255:29,0 chr1 86048724 . A . PASS END=86048725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 86119741 . T . PASS END=86119781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:104:0,120,1800:0,255,255:40,0 chr1 86123530 . C . PASS END=86123654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,120,1800:0,162,255:40,0 chr1 86127942 . T . PASS END=86127960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:81:0,120,1800:0,226,255:40,0 chr1 86142919 . C . PASS END=86142996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:66:0,120,1800:0,198,255:40,0 chr1 86144384 . C . PASS END=86144464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:69:0,114,1710:0,174,255:40,0 chr1 86146519 . C . PASS END=86146587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,155,255:40,0 chr1 86167840 . T . PASS END=86167943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:41:0,87,1305:0,110,255:40,0 chr1 86171761 . A . PASS END=86171846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:74:0,120,1800:0,157,255:40,0 chr1 86171932 . C . PASS END=86172038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:69:0,109,1800:0,109,255:40,0 chr1 86172125 . C . PASS END=86172190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,123,255:40,0 chr1 86173312 . C . PASS END=86173596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:50:0,108,1793:0,108,255:40,0 chr1 86173597 . C . PASS END=86173597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:99:56:0,118,1800:0,118,255:40,0 chr1 86173598 . T . PASS END=86173598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,6:54:40:54:0,40,1603:0,40,255:40,0 chr1 86173599 . A . PASS END=86173603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:53:0,115,1777:0,115,255:40,0 chr1 86173604 . C . PASS END=86173604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:20:53:0,20,1385:0,20,255:40,0 chr1 86173605 . C . PASS END=86173630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:92:48:0,92,1516:0,92,255:40,0 chr1 86173631 . C . PASS END=86173632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:49:46:0,49,1338:0,49,255:40,0 chr1 86173633 . G . PASS END=86173633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 86173634 . C . LowGQ END=86173634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,10:45:0:45:0,0,842:76,0,255:33,0 chr1 86173635 . G . PASS END=86173637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1345:0,117,255:40,0 chr1 86173638 . C . LowGQ END=86173638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,16:45:0:45:0,0,550:240,0,255:25,0 chr1 86173639 . T . PASS END=86173639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 86173640 . C . LowGQ END=86173641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,9:43:0:43:0,0,693:43,0,255:30,0 chr1 86173642 . T . PASS END=86173642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,115,1507:0,115,255:39,0 chr1 86173643 . C . LowGQ END=86173644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,7:44:0:44:0,0,966:16,0,255:32,0 chr1 86173645 . T . PASS END=86173652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:43:0,93,1395:0,101,255:40,0 chr1 86173653 . A . PASS END=86173653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1297:0,54,255:29,0 chr1 86173654 . G . PASS END=86173657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:44:0,90,1350:0,93,255:32,0 chr1 86173658 . T . PASS END=86173658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1305:0,73,255:30,0 chr1 86173659 . A . PASS END=86173665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:84:36:0,84,1260:0,87,255:29,0 chr1 86173666 . A . PASS END=86173666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:28,0 chr1 86173667 . C . PASS END=86173668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,83,255:28,0 chr1 86173669 . T . PASS END=86173669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:60:33:0,60,900:0,65,255:19,0 chr1 86173670 . C . PASS END=86173670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1016:0,57,255:21,0 chr1 86173671 . C . PASS END=86173672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1170:0,61,255:26,0 chr1 86173673 . G . PASS END=86173673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 86173674 . T . PASS END=86173674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1213:0,67,255:27,0 chr1 86173675 . T . PASS END=86173675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 86173676 . C . PASS END=86173677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1170:0,72,255:26,0 chr1 86173678 . A . PASS END=86173681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,92,255:28,0 chr1 86173682 . A . PASS END=86173682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1000:0,16,255:27,0 chr1 86173683 . C . PASS END=86173683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 86173684 . T . PASS END=86173684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,917:0,32,255:26,0 chr1 86173685 . G . PASS END=86173691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 86173692 . C . PASS END=86173692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 86173693 . A . PASS END=86173693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 86173694 . A . PASS END=86173714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,989:0,82,255:30,0 chr1 86173715 . A . PASS END=86173715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 86173716 . G . PASS END=86173737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1125:0,82,255:33,0 chr1 86173738 . A . PASS END=86173738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,1033:0,41,255:27,0 chr1 86173739 . C . PASS END=86173739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 86173740 . C . PASS END=86173740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:31,0 chr1 86173741 . G . PASS END=86173755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1193:0,86,255:33,0 chr1 86173756 . A . PASS END=86173756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1059:0,63,255:32,0 chr1 86173757 . T . PASS END=86173807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1054:0,83,255:38,0 chr1 86173808 . T . PASS END=86173816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 86173817 . G . PASS END=86173819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 86173820 . C . PASS END=86173820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:26,0 chr1 86173821 . T . PASS END=86173821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,893:0,54,255:26,0 chr1 86173822 . G . PASS END=86173845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,895:0,62,255:26,0 chr1 86173846 . T . PASS END=86173846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:19,0 chr1 86173847 . C . PASS END=86173848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 86173849 . T . PASS END=86173849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 86173850 . C . PASS END=86173853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 86173854 . C . PASS END=86173855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 86173856 . C . PASS END=86173860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 86173861 . A . PASS END=86173926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,582:0,43,255:19,0 chr1 86173927 . C . PASS END=86173967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,397:0,36,255:13,0 chr1 86196229 . T . PASS END=86196375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:47:0,113,1717:0,113,255:40,1 chr1 86200432 . C . PASS END=86200440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 86200441 . A . PASS END=86200442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 86200443 . C . PASS END=86200460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,939:0,75,255:26,0 chr1 86200461 . C . PASS END=86200465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:30,0 chr1 86200466 . A . PASS END=86200466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 86200467 . G . PASS END=86200467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 86200468 . A . PASS END=86200468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 86200469 . G . PASS END=86200472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1013:0,90,255:30,0 chr1 86200473 . T . PASS END=86200473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 86200474 . T . PASS END=86200477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 86200478 . T . PASS END=86200478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 86200479 . T . PASS END=86200538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1111:0,83,255:40,0 chr1 86200539 . T . PASS END=86200539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:39,0 chr1 86200540 . G . PASS END=86200647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:42:0,96,1529:0,96,255:40,0 chr1 86201937 . T . PASS END=86201940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:26,0 chr1 86201941 . C . PASS END=86201949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:31,0 chr1 86201950 . T . PASS END=86201950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr1 86201951 . C . PASS END=86201954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:32,0 chr1 86201955 . G . PASS END=86201955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:31,0 chr1 86201956 . G . PASS END=86201956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1341:0,105,255:35,0 chr1 86201957 . T . PASS END=86201957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:34,0 chr1 86201958 . C . PASS END=86202209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:35:0,86,1241:0,86,255:40,0 chr1 86202210 . C . PASS END=86202222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,81,255:26,0 chr1 86202223 . G . PASS END=86202235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:51:23:0,51,765:0,59,255:19,0 chr1 86202236 . T . PASS END=86202236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 86202237 . G . PASS END=86202241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,792:0,52,255:19,0 chr1 86202242 . C . PASS END=86202242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:16,0 chr1 86203079 . C . PASS END=86203188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:45:0,102,1530:0,118,255:40,0 chr1 86210349 . C . PASS END=86210517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:42:0,96,1399:0,96,255:40,0 chr1 86211124 . C . PASS END=86211189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,180,255:40,0 chr1 86227079 . T . PASS END=86227105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,114,1710:0,121,255:40,0 chr1 86227214 . T . PASS END=86227249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1395:0,110,255:40,0 chr1 86241357 . A . PASS END=86241358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:93:0,120,1800:0,255,255:40,0 chr1 86241359 . T . PASS END=86241392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,2:95:99:89:0,120,1800:0,209,255:40,0 chr1 86246903 . A . PASS END=86246955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:63:0,120,1800:0,144,255:40,0 chr1 86246956 . C . PASS END=86246956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr1 86249179 . T . PASS END=86249241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,177,255:40,0 chr1 86249796 . T . PASS END=86249849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,130,255:40,0 chr1 86249942 . A . PASS END=86250049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:38:0,84,1143:0,84,255:40,0 chr1 86252037 . C . PASS END=86252132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,88,255:40,0 chr1 86252133 . G . PASS END=86252135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 86252136 . T . PASS END=86252138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,82,255:27,0 chr1 86252139 . G . PASS END=86252144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:26,0 chr1 86282471 . A . PASS END=86282578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:30:0,84,1260:0,90,255:40,0 chr1 86283717 . A . PASS END=86283770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,172,255:40,0 chr1 86289219 . T . PASS END=86289272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,116,1615:0,116,255:40,0 chr1 86289368 . T . PASS END=86289421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:35:0,92,1310:0,92,255:40,0 chr1 86304268 . C . PASS END=86304321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,137,255:40,0 chr1 86306905 . T . PASS END=86306961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:48:0,111,1684:0,111,255:40,0 chr1 86307751 . C . PASS END=86307804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,148,255:40,0 chr1 86308023 . C . PASS END=86308076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,158,255:40,0 chr1 86313348 . C . PASS END=86313455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,120,1800:0,129,255:40,1 chr1 86315036 . C . PASS END=86315089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:71:0,120,1800:0,192,255:40,0 chr1 86334202 . C . PASS END=86334309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:50:0,120,1800:0,143,255:40,0 chr1 86334465 . C . PASS END=86334518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,141,255:40,0 chr1 86340332 . C . PASS END=86340385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,141,255:40,0 chr1 86340960 . C . PASS END=86341013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,84,255:40,0 chr1 86342805 . C . PASS END=86342858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:65:0,120,1800:0,162,255:40,0 chr1 86355243 . T . PASS END=86355296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,118,1800:0,118,255:40,0 chr1 86361541 . T . PASS END=86361585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,162,255:40,0 chr1 86361704 . A . PASS END=86361748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:76:0,120,1800:0,174,255:40,0 chr1 86362039 . C . PASS END=86362092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:58:0,120,1800:0,160,255:40,0 chr1 86372877 . T . PASS END=86372930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,180,255:40,0 chr1 86374281 . A . PASS END=86374310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1044:0,84,255:30,0 chr1 86374311 . A . PASS END=86374322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,68,255:24,0 chr1 86374323 . A . PASS END=86374334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:20:0,45,675:0,60,255:17,0 chr1 86375633 . C . PASS END=86375686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,151,255:40,0 chr1 86377063 . C . PASS END=86377116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,165,255:40,0 chr1 86426932 . T . PASS END=86426976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:87:0,120,1800:0,255,255:40,0 chr1 86430692 . C . PASS END=86430745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:38:0,90,1350:0,114,255:40,0 chr1 86435910 . T . PASS END=86435954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:98:0,120,1800:0,222,255:40,1 chr1 86437023 . C . PASS END=86437076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,102,1575:0,102,255:40,0 chr1 86448391 . C . PASS END=86448435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:102:0,120,1800:0,255,255:40,0 chr1 86453284 . C . PASS END=86453337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:53:0,120,1800:0,138,255:40,0 chr1 86469751 . C . PASS END=86469789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,155,255:40,0 chr1 86482834 . C . PASS END=86482884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:37:0,80,1282:0,80,255:40,0 chr1 86482885 . G . PASS END=86482887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,107,1458:0,107,255:38,0 chr1 86487923 . T . PASS END=86487967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:52:0,81,1215:0,139,255:40,0 chr1 86487968 . A . PASS END=86487969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:69:50:0,69,1035:0,134,255:24,0 chr1 86487970 . C . PASS END=86487975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:42:48:0,42,630:0,134,255:19,0 chr1 86487976 . C . PASS END=86487976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:36:45:0,36,540:0,135,255:12,0 chr1 86488221 . C . PASS END=86488231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,183,255:40,0 chr1 86488232 . G A, 50.00 PASS DP=70;MQ=248.83;MQRankSum=6.408;ReadPosRankSum=3.932;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,38,0:0.543,0.000:70:15,22,0:17,16,0:48:85,0,49,1290,1144,2434:255,0,255:31,0:5.0000e+01,6.8081e-05,5.2437e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,15,18,20:16,16,22,16 chr1 86488233 . A . PASS END=86488269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,178,255:40,0 chr1 86488270 . T . PASS END=86488274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 86488516 . C . PASS END=86488560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,120,1800:0,138,255:40,0 chr1 86488637 . C . PASS END=86488690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:36:0,87,1305:0,95,255:40,0 chr1 86497561 . T . PASS END=86497605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,148,255:40,0 chr1 86499553 . A . PASS END=86499606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,149,255:40,0 chr1 86512508 . C . PASS END=86512535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:81:0,120,1800:0,229,255:40,0 chr1 86512536 . C T, 47.06 PASS DP=84;MQ=250.00;MQRankSum=7.709;ReadPosRankSum=1.764;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,34,0:0.410,0.000:83:27,19,0:22,15,0:46:82,0,50,1179,1736,2916:255,0,255:40,0:4.7055e+01,1.0743e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,35,18,16:26,23,17,17 chr1 86512537 . G . PASS END=86512552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,219,255:40,0 chr1 86515807 . C . PASS END=86515860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:76:0,120,1800:0,218,255:40,0 chr1 86523614 . T . PASS END=86523658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,203,255:40,0 chr1 86524804 . C . PASS END=86524857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,179,255:40,0 chr1 86529398 . T . PASS END=86529442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,131,255:40,0 chr1 86554857 . C . PASS END=86554910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:78:0,120,1800:0,218,255:40,0 chr1 86557950 . C . PASS END=86557966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,157,255:40,0 chr1 86557967 . G A, 50.00 PASS DP=70;MQ=250.00;MQRankSum=7.177;ReadPosRankSum=3.130;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,37,0:0.529,0.000:70:19,17,0:14,20,0:48:85,0,50,1278,1172,2450:255,0,255:33,0:5.0000e+01,6.6527e-05,5.2749e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,19,14,23:18,15,22,15 chr1 86557968 . T . PASS END=86558003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,136,255:40,0 chr1 86578250 . C . PASS END=86578303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,170,255:40,0 chr1 86581008 . C . PASS END=86581061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,111,1665:0,119,255:40,0 chr1 86590528 . G . PASS END=86590555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:97:38:0,97,1267:0,97,255:40,0 chr1 86590556 . C . PASS END=86590877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,113,1800:0,113,255:40,0 chr1 86590878 . C . PASS END=86590914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,157,255:40,0 chr1 86590915 . G A, 221.10 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,32,0:0,26,0:171:259,174,0,2204,174,2204:255,174,0:0,0:2.2110e+02,1.7110e+02,0.0000e+00,4.5000e+02,2.0587e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,26:0,0,28,30 chr1 86590916 . C . PASS END=86590952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,154,255:40,0 chr1 86590953 . T . PASS END=86591799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:42:0,89,1378:0,89,255:40,1 chr1 86591800 . C . PASS END=86591836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:36:0,93,1395:0,108,255:40,0 chr1 86591837 . G A, 155.34 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,23,0:0,13,0:105:193,108,0,1378,108,1378:255,108,0:0,0:1.5534e+02,1.0534e+02,0.0000e+00,4.5000e+02,1.4011e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,23:0,0,20,16 chr1 86591838 . C . PASS END=86591850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:29:0,66,1125:0,66,255:26,0 chr1 86591851 . T . PASS END=86591851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:26,0 chr1 86591852 . C . PASS END=86591853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 86591854 . T . PASS END=86591865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr1 86591866 . T . PASS END=86591866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 86591867 . C . PASS END=86591868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 86591869 . A . PASS END=86591874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,855:0,56,255:19,0 chr1 86591875 . T . PASS END=86591876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 86591877 . G . PASS END=86591877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 86591878 . T . PASS END=86591878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 86591879 . T . PASS END=86591879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 86591880 . G . PASS END=86591897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,607:0,40,255:18,0 chr1 86611802 . C . PASS END=86611866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,151,255:40,0 chr1 86622024 . G . PASS END=86622024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 86622025 . T . PASS END=86622026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 86622027 . T . PASS END=86622027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 86622028 . T . PASS END=86622028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 86622029 . T . PASS END=86622034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 86622035 . G . PASS END=86622079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:31,0 chr1 86814433 . T . PASS END=86814561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:60:0,120,1800:0,147,255:40,0 chr1 86817874 . T . PASS END=86817891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,219,255:40,0 chr1 86818542 . A . PASS END=86818571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:98:0,120,1800:0,255,255:40,0 chr1 86818572 . T C, 359.54 PASS DP=105;MQ=250.00;FractionInformativeReads=0.990 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,104,0:1.000,0.000:104:0,61,0:0,43,0:310:397,313,0,3987,313,3987:255,255,0:0,0:3.5954e+02,3.0954e+02,0.0000e+00,4.4853e+02,3.4431e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,65,39:0,0,46,58 chr1 86818573 . T . PASS END=86818609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:105:0,120,1800:0,255,255:40,0 chr1 86818610 . A . PASS END=86818667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:71:0,120,1800:0,187,255:40,0 chr1 86820213 . C . PASS END=86820229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,120,1496:0,120,255:40,0 chr1 86820230 . C . PASS END=86820266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,140,255:40,0 chr1 86820267 . C T, 286.86 PASS DP=80;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,80,0:1.000,0.000:80:0,40,0:0,40,0:237:325,240,0,3036,240,3036:255,241,0:0,0:2.8686e+02,2.3686e+02,0.0000e+00,4.5000e+02,2.7163e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,54,26:0,0,44,36 chr1 86820268 . T . PASS END=86820304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,208,255:40,0 chr1 86820305 . T . PASS END=86820375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:72:0,120,1800:0,166,255:40,0 chr1 86820457 . T . PASS END=86820542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,136,255:40,0 chr1 86821028 . C . PASS END=86821071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,165,255:40,0 chr1 86821643 . C . PASS END=86821690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:74:0,120,1800:0,206,255:40,0 chr1 86822127 . C . PASS END=86822266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1219:0,88,255:40,0 chr1 86822267 . A . PASS END=86822285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,917:0,75,255:25,0 chr1 86824470 . C . PASS END=86824574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:65:0,120,1800:0,149,255:40,0 chr1 86826109 . C . PASS END=86826131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:76:0,120,1800:0,201,255:40,0 chr1 86826132 . G . PASS END=86826168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:91:0,120,1800:0,240,255:40,0 chr1 86826169 . G A, 49.82 PASS DP=92;MQ=250.00;MQRankSum=8.250;ReadPosRankSum=6.898;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,44,0:0.478,0.000:92:25,25,0:23,19,0:48:85,0,50,1504,1672,3176:255,0,255:40,0:4.9820e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,30,18,26:21,27,21,23 chr1 86826170 . A . PASS END=86826206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:77:0,120,1800:0,214,255:40,0 chr1 86826207 . C . PASS END=86826219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,190,255:40,0 chr1 86834319 . C . PASS END=86834405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:93:0,120,1800:0,238,255:40,0 chr1 86836701 . C . PASS END=86836836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:68:0,120,1800:0,185,255:40,0 chr1 86838114 . T . PASS END=86838120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,106,1377:0,106,255:39,0 chr1 86838121 . T . PASS END=86838157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,120,1800:0,122,255:40,0 chr1 86838158 . C T, 218.08 PASS DP=58;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,32,0:0,25,0:168:256,171,0,2138,171,2138:255,174,0:0,0:2.1808e+02,1.6808e+02,0.0000e+00,4.5000e+02,2.0285e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,24:0,0,24,33 chr1 86838159 . A . PASS END=86838195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,136,255:40,0 chr1 86838196 . C . PASS END=86838223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,138,255:40,0 chr1 86841916 . C . PASS END=86842101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:91:41:0,91,1530:0,91,255:40,0 chr1 86847925 . C . PASS END=86847954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,210,255:40,0 chr1 86847955 . G A, 331.54 PASS DP=95;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,95,0:1.000,0.000:95:0,49,0:0,46,0:282:369,285,0,3580,285,3580:255,255,0:0,0:3.3154e+02,2.8154e+02,0.0000e+00,4.4853e+02,3.1631e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,63,32:0,0,51,44 chr1 86847956 . G . PASS END=86847992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:89:0,120,1800:0,241,255:40,0 chr1 86847993 . G . PASS END=86848041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:104:0,120,1800:0,255,255:40,0 chr1 86848614 . C . PASS END=86848685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:77:0,120,1800:0,187,255:40,0 chr1 86848817 . A . PASS END=86848879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:89:0,120,1800:0,237,255:40,0 chr1 86850359 . T . PASS END=86850484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,173,255:40,0 chr1 86851141 . A . PASS END=86851273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:54:0,120,1800:0,145,255:40,0 chr1 86852528 . T . PASS END=86852710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,110,1800:0,110,255:40,0 chr1 86889931 . A . PASS END=86889931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 86889932 . T . PASS END=86889932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 86889933 . G . PASS END=86890116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:30:0,83,1125:0,83,255:40,0 chr1 86891022 . G . PASS END=86891159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:63:0,101,1800:0,101,255:40,0 chr1 86894101 . G . PASS END=86894101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 86894102 . C . PASS END=86894111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr1 86894112 . A . PASS END=86894112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 86894113 . G . PASS END=86894115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 86894116 . A . PASS END=86894116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1108:0,49,255:29,0 chr1 86894117 . C . PASS END=86894251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:83:32:0,83,1202:0,83,255:40,0 chr1 86896545 . G . PASS END=86896650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:37:0,93,1313:0,100,255:40,0 chr1 86896651 . A . PASS END=86896653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr1 86898052 . G . PASS END=86898211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:43:0,113,1574:0,113,255:40,0 chr1 86900201 . G . PASS END=86900218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,939:0,62,255:26,0 chr1 86900219 . G . PASS END=86900245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,981:0,81,255:29,0 chr1 86900246 . A . PASS END=86900246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:31,0 chr1 86900247 . A . PASS END=86900397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1166:0,86,255:40,0 chr1 86900398 . A . PASS END=86900419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,68,255:26,0 chr1 86900420 . A . PASS END=86900420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:19,0 chr1 86900421 . T . PASS END=86900422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 86900423 . G . PASS END=86900428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:19,0 chr1 86904559 . G . PASS END=86904587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,99,1357:0,108,255:40,0 chr1 86904588 . C T, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.800;ReadPosRankSum=2.922;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,23,0:0.500,0.000:46:9,12,0:14,11,0:48:85,0,50,767,823,1590:255,0,255:23,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,7,14,9:12,11,11,12 chr1 86904589 . G . PASS END=86904625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:46:0,120,1800:0,128,255:40,0 chr1 86904626 . C . PASS END=86904789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,111,1674:0,111,255:40,0 chr1 86905831 . G . PASS END=86905831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 86905832 . T . PASS END=86905832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr1 86905833 . G . PASS END=86905837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1011:0,84,255:31,0 chr1 86905838 . A . PASS END=86905838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 86905839 . A . PASS END=86905840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 86905841 . A . PASS END=86905841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 86905842 . A . PASS END=86905914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:32:0,80,1117:0,80,255:40,0 chr1 86905915 . T . PASS END=86905915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1360:0,65,255:36,0 chr1 86905916 . T . PASS END=86905978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,87,255:40,0 chr1 86905979 . C . PASS END=86906008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 86907120 . G . PASS END=86907226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:63:0,120,1800:0,173,255:40,0 chr1 86909470 . C . PASS END=86909492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:47:0,108,1637:0,108,255:40,0 chr1 86909493 . C T, 45.89 PASS DP=56;MQ=249.79;MQRankSum=6.266;ReadPosRankSum=1.485;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,22,0:0.393,0.000:56:17,8,0:17,14,0:45:81,0,50,750,1208,1958:255,0,255:31,0:4.5892e+01,1.3357e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,11,18,4:20,14,10,12 chr1 86909494 . A . PASS END=86909530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,140,255:40,0 chr1 86909531 . A . PASS END=86909531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr1 86909532 . T . PASS END=86909532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 86909533 . A . PASS END=86909542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,151,255:40,0 chr1 86909543 . G . PASS END=86909543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr1 86909544 . C . PASS END=86909544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 86909545 . A . PASS END=86909581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,189,255:40,0 chr1 86909582 . G A, 49.48 PASS DP=80;MQ=250.00;MQRankSum=7.671;ReadPosRankSum=5.404;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,37,0:0.463,0.000:80:21,14,0:22,23,0:48:84,0,50,1278,1523,2802:255,0,255:37,0:4.9479e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,15,16,21:18,25,23,14 chr1 86909583 . T . PASS END=86909619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,206,255:40,0 chr1 86909620 . A . PASS END=86909694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,164,255:40,0 chr1 86911067 . C . LowGQ END=86911067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,10:46:0:46:0,0,848:47,0,255:36,1 chr1 86911068 . T . PASS END=86911069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,105,1463:0,105,255:40,0 chr1 86911070 . A . PASS END=86911070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:52:47:0,52,1383:0,52,255:40,0 chr1 86911071 . G . LowGQ END=86911071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,14:47:0:47:0,0,773:106,0,255:33,0 chr1 86911072 . A . PASS END=86911073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:93:47:0,93,1398:0,93,255:40,0 chr1 86911074 . G . LowGQ END=86911075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,7:48:0:48:0,0,947:0,0,255:40,0 chr1 86911076 . T . PASS END=86911076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:74:49:0,74,1443:0,74,255:40,0 chr1 86911077 . T . PASS END=86911077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,113,1526:0,113,255:40,0 chr1 86911078 . C . PASS END=86911078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:58:49:0,58,1430:0,58,255:40,0 chr1 86911079 . G . PASS END=86911079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:24:49:0,24,1164:0,24,255:40,0 chr1 86911080 . C . PASS END=86911089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:80:53:0,80,1652:0,80,255:40,0 chr1 86911090 . A . PASS END=86911090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:37:58:0,37,1535:0,37,255:40,0 chr1 86911091 . G . PASS END=86911091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:58:0,118,1882:0,118,255:40,0 chr1 86911092 . A . PASS END=86911092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:38:58:0,38,1581:0,38,255:40,0 chr1 86911093 . T . PASS END=86911093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:70:58:0,70,1627:0,70,255:40,0 chr1 86911094 . G . PASS END=86911096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,141,255:40,0 chr1 86911097 . A . LowGQ END=86911097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,11:60:0:60:0,0,1486:25,0,255:40,0 chr1 86911098 . G . PASS END=86911106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:86:60:0,86,1742:0,86,255:40,0 chr1 86911107 . T . PASS END=86911107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:69:61:0,69,1664:0,69,255:40,0 chr1 86911108 . C . PASS END=86911115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:83:61:0,83,1742:0,83,255:40,0 chr1 86911116 . T . PASS END=86911118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,106,1800:0,106,255:40,0 chr1 86911119 . A . PASS END=86911119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,7:63:36:63:0,36,1764:0,36,255:40,0 chr1 86911120 . T . PASS END=86911192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:87:39:0,87,1530:0,87,255:40,0 chr1 86911193 . T . PASS END=86911193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:33,0 chr1 86911194 . A . PASS END=86911204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:34,0 chr1 86913191 . C . PASS END=86913192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,652:0,54,255:18,0 chr1 86913193 . T . PASS END=86913193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 86913194 . G . PASS END=86913200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 86913201 . G . PASS END=86913204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:28,0 chr1 86913205 . T . PASS END=86913208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 86913209 . A . PASS END=86913209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 86913210 . C . PASS END=86913215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 86913216 . A . PASS END=86913216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:28,0 chr1 86913217 . C . PASS END=86913225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1041:0,87,255:30,0 chr1 86913226 . T . PASS END=86913226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 86913227 . C . PASS END=86913441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:86:31:0,86,1172:0,86,255:40,0 chr1 86913442 . A . PASS END=86913442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1270:0,59,255:28,0 chr1 86913443 . C . PASS END=86913444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,108,255:27,0 chr1 86913445 . C . PASS END=86913445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:25,0 chr1 86913446 . C . PASS END=86913450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:30,0 chr1 86913451 . T . PASS END=86913451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1123:0,55,255:26,0 chr1 86913452 . G . PASS END=86913453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:29,0 chr1 86913454 . T . PASS END=86913454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:28,0 chr1 86913455 . G . PASS END=86913455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 86913456 . G . PASS END=86913456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr1 86913457 . A . PASS END=86913461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1011:0,71,255:27,0 chr1 86916246 . G . PASS END=86916416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:97:38:0,97,1208:0,97,255:40,0 chr1 86919052 . G . PASS END=86919052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 86919053 . T . PASS END=86919053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 86919054 . A . PASS END=86919055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 86919056 . T . PASS END=86919056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr1 86919057 . A . PASS END=86919267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:31:0,80,1132:0,80,255:40,0 chr1 86919268 . A . PASS END=86919268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:28,0 chr1 86919269 . C . PASS END=86919281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 86919282 . C . PASS END=86919285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 86920768 . C . PASS END=86920771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 86920772 . A . PASS END=86920772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:24,0 chr1 86920773 . A . PASS END=86920780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:32,0 chr1 86920781 . A . PASS END=86920781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:31,0 chr1 86920782 . A . PASS END=86920783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:33,0 chr1 86920784 . A . PASS END=86920784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1214:0,72,255:31,0 chr1 86920785 . A . PASS END=86921210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:92:33:0,92,1280:0,92,255:40,1 chr1 86934655 . A . PASS END=86934663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 86934664 . T . PASS END=86934669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 86934670 . A . PASS END=86934670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:26,0 chr1 86934671 . G . PASS END=86934689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1117:0,90,255:34,0 chr1 86934690 . T . PASS END=86934690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1209:0,64,255:33,0 chr1 86934691 . C . PASS END=86934816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:34:0,88,1204:0,88,255:40,0 chr1 86939100 . G . PASS END=86939129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:37:0,98,1402:0,98,255:40,0 chr1 86939130 . C T, 228.75 PASS DP=61;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,31,0:0,30,0:179:267,182,0,2232,182,2232:255,183,0:0,0:2.2875e+02,1.7875e+02,0.0000e+00,4.5000e+02,2.1352e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,49,12:0,0,27,34 chr1 86939131 . T . PASS END=86939167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,176,255:40,0 chr1 86939168 . T . PASS END=86939240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,101,1576:0,101,255:40,0 chr1 86939412 . G . PASS END=86939420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 86939421 . C . PASS END=86939421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 86939422 . T . PASS END=86939427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 86939428 . C . PASS END=86939453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:30,0 chr1 86939454 . G . PASS END=86939455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:23,0 chr1 86939456 . A . PASS END=86939559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:42:0,94,1620:0,94,255:40,0 chr1 86942131 . G . PASS END=86942236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:49:0,87,1305:0,136,255:40,0 chr1 86947888 . A . PASS END=86947888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:34,0 chr1 86947889 . T . PASS END=86947889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:33,0 chr1 86947890 . G . PASS END=86947890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1349:0,108,255:36,0 chr1 86947891 . T . PASS END=86947891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:35,0 chr1 86947892 . T . PASS END=86947937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,108,1343:0,108,255:40,0 chr1 86947938 . G . PASS END=86947974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,165,255:40,0 chr1 86947975 . A T, 50.00 PASS DP=70;MQ=249.50;MQRankSum=6.759;ReadPosRankSum=3.305;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,40,0:0.571,0.000:70:12,24,0:18,16,0:48:85,0,48,1349,1049,2398:255,0,255:30,0:5.0000e+01,7.5070e-05,5.1390e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,17,28,12:15,15,18,22 chr1 86947976 . A . PASS END=86948012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,160,255:40,0 chr1 86948013 . A . PASS END=86948065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:43:0,99,1485:0,119,255:40,0 chr1 86951026 . A . PASS END=86951244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:34:0,84,1166:0,84,255:40,0 chr1 86952209 . A . PASS END=86952209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 86952210 . C . PASS END=86952211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 86952212 . G . PASS END=86952214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr1 86952215 . A . PASS END=86952215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 86952216 . A . PASS END=86952231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,653:0,54,255:19,0 chr1 86952232 . G . PASS END=86952259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:23:0,68,860:0,68,255:26,0 chr1 86952260 . C . PASS END=86952260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 86952261 . A . PASS END=86952263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 86952264 . C . PASS END=86952286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1233:0,89,255:38,0 chr1 86952287 . G . PASS END=86952323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:39:0,87,1360:0,87,255:40,0 chr1 86952324 . A G, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.057;ReadPosRankSum=3.509;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,29,0:0.569,0.000:51:11,11,0:11,18,0:48:85,0,48,1029,779,1808:255,0,255:21,0:5.0000e+01,7.5070e-05,5.1361e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,19,10:13,9,17,12 chr1 86952325 . T . PASS END=86952361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,140,255:40,0 chr1 86952362 . A . PASS END=86952434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:33:0,80,1183:0,80,255:40,0 chr1 86952435 . C . PASS END=86952436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:30:0,75,1125:0,90,255:25,0 chr1 86954679 . G . PASS END=86954813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:31:0,90,1140:0,93,255:40,0 chr1 86954814 . T . PASS END=86954814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1230:0,54,255:31,0 chr1 86954815 . C . PASS END=86954837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1203:0,88,255:35,0 chr1 86954838 . C . PASS END=86954838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1194:0,71,255:30,0 chr1 86954839 . T . PASS END=86954853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:32,0 chr1 86956948 . G . PASS END=86956951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,105,1575:0,108,255:39,0 chr1 86956952 . T . PASS END=86956952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1219:0,70,255:36,0 chr1 86956953 . T . PASS END=86956990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,107,1526:0,107,255:40,0 chr1 86956991 . C . PASS END=86956991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:61:50:0,61,1329:0,61,255:40,0 chr1 86956992 . C . PASS END=86957054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:89:35:0,89,1271:0,89,255:40,0 chr1 86959067 . C . PASS END=86959078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:25,0 chr1 86959079 . G . PASS END=86959086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr1 86959087 . C . PASS END=86959087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 86959088 . C . PASS END=86959135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:32:0,87,1174:0,87,255:40,0 chr1 86959136 . G . PASS END=86959172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:43:0,96,1552:0,96,255:40,0 chr1 86959173 . T C, 176.42 PASS DP=44;MQ=250.00;FractionInformativeReads=0.977 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,19,0:0,24,0:126:214,129,0,1667,129,1667:255,129,0:0,0:1.7642e+02,1.2642e+02,0.0000e+00,4.5000e+02,1.6119e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,24:0,0,23,20 chr1 86959174 . G . PASS END=86959210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1598:0,116,255:40,0 chr1 86959211 . C . PASS END=86959255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:38:0,96,1413:0,104,255:40,0 chr1 86959256 . T . PASS END=86959256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:32,0 chr1 86959257 . A . PASS END=86959273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:34:0,84,1207:0,89,255:34,0 chr1 86959274 . A . PASS END=86959279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr1 86959280 . A . PASS END=86959282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:48:31:0,48,720:0,93,255:16,0 chr1 86959870 . G . PASS END=86959878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:19,0 chr1 86959879 . T . PASS END=86959888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,861:0,69,255:26,0 chr1 86959889 . G . PASS END=86959912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1031:0,81,255:35,0 chr1 86959913 . T . PASS END=86959913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr1 86959914 . G . PASS END=86960082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1260:0,86,255:40,0 chr1 86960083 . T . PASS END=86960093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1048:0,76,255:26,0 chr1 86960094 . A . PASS END=86960096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 86960097 . A . PASS END=86960120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,71,255:26,0 chr1 86960121 . T . PASS END=86960121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:18,0 chr1 86960122 . A . PASS END=86960123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 86960124 . T . PASS END=86960131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 86961188 . G . PASS END=86961188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 86961189 . T . PASS END=86961201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1111:0,83,255:36,0 chr1 86961202 . A . PASS END=86961202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 86961203 . A . PASS END=86961354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:81:31:0,81,1215:0,93,255:40,0 chr1 86961355 . A . PASS END=86961355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:26,0 chr1 86961356 . A . PASS END=86961358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 86964255 . A . PASS END=86964259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr1 86964260 . A . PASS END=86964265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:33,0 chr1 86964266 . T . PASS END=86964266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 86964267 . G . PASS END=86964268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr1 86964269 . A . PASS END=86964269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1209:0,72,255:32,0 chr1 86964270 . A . PASS END=86964481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1210:0,91,255:40,0 chr1 86964482 . G . PASS END=86964494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,892:0,61,255:26,0 chr1 86965337 . C . PASS END=86965381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:29:0,87,1013:0,87,255:40,0 chr1 86965382 . G . PASS END=86965418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,113,1693:0,113,255:40,0 chr1 86965419 . T C, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.188;ReadPosRankSum=2.632;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,32,0:0.593,0.000:54:11,16,0:11,16,0:47:85,0,47,1100,696,1796:255,0,255:19,0:5.0000e+01,8.9566e-05,4.9735e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,7,17,15:10,12,17,15 chr1 86965420 . G . PASS END=86965456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,146,255:40,0 chr1 86965457 . T . PASS END=86965720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:37:0,81,1215:0,81,255:40,0 chr1 86965721 . T . PASS END=86965723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,98,255:26,0 chr1 86965724 . C . PASS END=86965724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 86965725 . C . PASS END=86965728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:30:0,78,1170:0,90,255:26,0 chr1 87012803 . A . PASS END=87012961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,108,1620:0,118,255:40,0 chr1 87014969 . A . PASS END=87014974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:86:0,120,1800:0,242,255:40,0 chr1 87025615 . G . PASS END=87025755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:64:0,120,1800:0,176,255:40,0 chr1 87025894 . G . PASS END=87025964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:57:0,120,1800:0,133,255:40,0 chr1 87025965 . T . PASS END=87026001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,165,255:40,0 chr1 87026002 . C T, 42.86 PASS DP=59;MQ=249.16;MQRankSum=6.309;ReadPosRankSum=4.045;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,21,0:0.356,0.000:59:19,11,0:19,10,0:42:78,0,50,710,1254,1964:255,0,255:35,0:4.2863e+01,2.4644e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,20,11,10:19,19,7,14 chr1 87026003 . T . PASS END=87026039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,108,1620:0,121,255:40,0 chr1 87026040 . A . PASS END=87026041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,108,1620:0,138,255:36,0 chr1 87029344 . G . PASS END=87029353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,771:0,69,255:25,0 chr1 87029354 . T . PASS END=87029354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 87029355 . G . PASS END=87029356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 87029357 . C . PASS END=87029362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 87029363 . G . PASS END=87029363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 87029364 . T . PASS END=87029452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:39,0 chr1 87030957 . G . PASS END=87031134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:43:0,120,1800:0,125,255:40,0 chr1 87031485 . G . PASS END=87031703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:41:0,93,1395:0,119,255:40,0 chr1 87033107 . G . PASS END=87033298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1200:0,83,255:40,0 chr1 87033299 . A . PASS END=87033325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,64,255:24,0 chr1 87033326 . G . PASS END=87033326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 87033327 . C . PASS END=87033334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 87036760 . G . PASS END=87036783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:36:0,93,1301:0,93,255:40,0 chr1 87036784 . C . PASS END=87036937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:45:0,120,1800:0,125,255:40,0 chr1 87038297 . G . PASS END=87038403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,127,255:40,0 chr1 87040223 . C . PASS END=87040224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 87040225 . C . PASS END=87040233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,942:0,70,255:26,0 chr1 87040234 . G . PASS END=87040236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 87040237 . A . PASS END=87040237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:30,0 chr1 87040238 . T . PASS END=87040425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:33:0,83,1178:0,83,255:40,0 chr1 87040426 . A . PASS END=87040426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:22:36:0,22,1141:0,22,255:30,0 chr1 87040427 . G . PASS END=87040427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 87040428 . G . PASS END=87040428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 87040429 . A . PASS END=87040430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:28,0 chr1 87040431 . C . PASS END=87040438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:32:0,66,990:0,70,255:26,0 chr1 87041015 . G . PASS END=87041015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 87041016 . T . PASS END=87041016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:26,0 chr1 87041017 . G . PASS END=87041251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:87:32:0,87,1305:0,95,255:40,0 chr1 87041252 . G . PASS END=87041252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1762:0,76,255:40,0 chr1 87041253 . A . PASS END=87041271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:83:46:0,83,1548:0,83,255:40,0 chr1 87041272 . T . PASS END=87041272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:68:46:0,68,1426:0,68,255:38,0 chr1 87041273 . A . PASS END=87041282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:42:0,87,1490:0,87,255:39,0 chr1 87043585 . G . PASS END=87043604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,102,1421:0,106,255:40,0 chr1 87043605 . G . PASS END=87043743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:38:0,90,1350:0,111,255:40,0 chr1 87043744 . G . PASS END=87043755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:27:0,66,990:0,67,255:25,0 chr1 87045037 . G . PASS END=87045048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 87045049 . C . PASS END=87045049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 87045050 . A . PASS END=87045061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,992:0,90,255:32,0 chr1 87045062 . A . PASS END=87045062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr1 87045063 . C . PASS END=87045248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1163:0,80,255:40,0 chr1 87045249 . G . PASS END=87045249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 87045250 . A . PASS END=87045250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 87045251 . T . PASS END=87045251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 87045252 . A . PASS END=87045252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,934:0,48,255:25,1 chr1 87045253 . A . PASS END=87045267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,886:0,61,255:25,0 chr1 87045268 . A . PASS END=87045270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 87045625 . T . PASS END=87045849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:34:0,99,1377:0,102,255:40,0 chr1 87045850 . C . PASS END=87045879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:81:70:0,81,1215:0,197,255:40,0 chr1 87045880 . A . PASS END=87045887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:60:74:0,60,900:0,195,255:26,0 chr1 87045888 . G . PASS END=87045894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:42:74:0,42,630:0,222,255:18,0 chr1 87045895 . A . LowGQ END=87045895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:74,0:74:0:74:0,0,0:0,222,255:0,1 chr1 87045896 . TCCTACA T, 278.87 PASS DP=81;MQ=249.83;FractionInformativeReads=0.951 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,77,0:1.000,0.000:77:0,41,0:0,36,0:229:311,232,0,2424,232,2424:255,0,255:0,78:2.7887e+02,2.2887e+02,0.0000e+00,4.5000e+02,2.6364e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,39,38:0,0,37,40 chr1 87045897 . C . LowGQ END=87045903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:20,79:99:0:76:0,0,0:255,0,0:40,78 chr1 87045904 . C . PASS END=87045949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,192,255:40,0 chr1 87045950 . A . PASS END=87046028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:35:0,90,1350:0,105,255:40,0 chr1 87170583 . A . PASS END=87170601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 87170602 . A . PASS END=87170602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,691:0,49,255:20,0 chr1 87170603 . C . PASS END=87170603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 87170604 . G . PASS END=87170604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:19,0 chr1 87170605 . T . PASS END=87170608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 87170609 . G . PASS END=87170625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr1 87170626 . C . PASS END=87170626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 87170627 . A . PASS END=87170652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 87170653 . A . PASS END=87170654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 87181407 . T . PASS END=87181548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:46:0,120,1800:0,138,255:40,0 chr1 87185190 . A . PASS END=87185318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:44:0,93,1395:0,102,255:40,0 chr1 87188223 . G . PASS END=87188356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:92:33:0,92,1211:0,92,255:40,0 chr1 87189996 . A . PASS END=87190046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:55:0,120,1800:0,139,255:40,0 chr1 87190047 . A . PASS END=87190088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:79:0,105,1575:0,203,255:40,1 chr1 87194086 . C . PASS END=87194172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,146,255:40,0 chr1 87195771 . A . PASS END=87195794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,209,255:40,0 chr1 87196918 . G . PASS END=87196944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:60:0,120,1800:0,142,255:40,0 chr1 87200285 . T . PASS END=87200374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:65:0,120,1800:0,165,255:40,0 chr1 87200762 . G . PASS END=87200766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,192,255:40,0 chr1 87200767 . T . PASS END=87200862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:93:36:0,93,1395:0,101,255:40,0 chr1 87207891 . T . PASS END=87207892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 87207893 . T . PASS END=87207893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 87207894 . T . PASS END=87208118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:28:0,80,1135:0,80,255:40,0 chr1 87208119 . G . PASS END=87208119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 87208811 . G . PASS END=87208915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:49:0,120,1800:0,131,255:40,0 chr1 87208916 . T . PASS END=87208918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,147,255:40,0 chr1 87329157 . T . PASS END=87329181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1344:0,87,255:39,0 chr1 87329182 . A . PASS END=87329182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:38,0 chr1 87329183 . G . PASS END=87329274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:39:0,81,1215:0,104,255:40,0 chr1 87329275 . G . PASS END=87329278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,101,255:26,0 chr1 87329279 . C . PASS END=87329288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1000:0,81,255:27,0 chr1 87333736 . C . PASS END=87333785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,120,1800:0,145,255:40,0 chr1 87346345 . C . PASS END=87346408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,179,255:40,0 chr1 87352839 . T . PASS END=87352879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,172,255:40,0 chr1 87368964 . C . PASS END=87368968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,854:0,72,255:24,0 chr1 87368969 . T . PASS END=87368969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 87368970 . G . PASS END=87368976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 87368977 . A . PASS END=87369002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:31,0 chr1 87369003 . T . PASS END=87369003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr1 87369004 . C . PASS END=87369087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,89,255:38,0 chr1 87369088 . T . PASS END=87369104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:25,0 chr1 87369105 . T . PASS END=87369105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:21,0 chr1 87369106 . G . PASS END=87369128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:21,0 chr1 87369129 . C . PASS END=87369131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:18,0 chr1 87379654 . T . PASS END=87379794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:38:0,90,1350:0,97,255:40,0 chr1 87380720 . A . PASS END=87380720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 87380721 . T . PASS END=87380721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 87380722 . G . PASS END=87380724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 87380725 . G . PASS END=87380725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:24,0 chr1 87380726 . C . PASS END=87380727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 87380728 . C . PASS END=87380731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:32,0 chr1 87380732 . A . PASS END=87380733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:32:0,66,1096:0,66,255:34,0 chr1 87380734 . G . PASS END=87380839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1169:0,80,255:40,0 chr1 87380840 . C . PASS END=87380840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr1 87380841 . T . PASS END=87380843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 87458765 . A . PASS END=87458779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,188,255:40,0 chr1 87458780 . T . PASS END=87458810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:67:0,120,1800:0,183,255:40,0 chr1 87538617 . A . PASS END=87538617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:28,0 chr1 87538618 . A . PASS END=87538629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1202:0,86,255:33,0 chr1 87538630 . A . PASS END=87538630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:31,0 chr1 87538631 . A . PASS END=87538855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:34:0,85,1147:0,85,255:40,0 chr1 87549877 . G . PASS END=87549895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:78:0,120,1800:0,182,255:40,0 chr1 87549896 . T . PASS END=87549962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:73:0,120,1800:0,202,255:40,0 chr1 87558214 . A . PASS END=87558352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,105,1518:0,105,255:40,0 chr1 87563521 . A . PASS END=87563622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,102,1346:0,102,255:40,0 chr1 87569115 . G . PASS END=87569269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:93:39:0,93,1395:0,117,255:40,0 chr1 87569270 . C . PASS END=87569272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:37:0,60,900:0,111,255:20,0 chr1 87570153 . G . PASS END=87570360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:47:0,120,1800:0,125,255:40,0 chr1 87570361 . T . PASS END=87570379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,111,1665:0,168,255:40,0 chr1 87599297 . C . PASS END=87599401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,120,1800:0,131,255:40,0 chr1 87633819 . G . PASS END=87633859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:61:0,120,1800:0,155,255:40,0 chr1 87709298 . A . PASS END=87709320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,177,255:40,0 chr1 87716184 . G . PASS END=87716184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 87716185 . G . PASS END=87716376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:27:0,81,1008:0,81,255:40,0 chr1 87716377 . G . PASS END=87716377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1322:0,60,255:36,0 chr1 87716378 . G . PASS END=87716380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,99,1485:0,109,255:34,0 chr1 87716381 . G . PASS END=87716381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:26:42:0,26,1034:0,26,255:28,0 chr1 87716382 . G . PASS END=87716392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:37:0,93,1395:0,109,255:34,0 chr1 87716393 . G . PASS END=87716393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1034:0,61,255:29,0 chr1 87716394 . G . PASS END=87716413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1041:0,82,255:33,0 chr1 87716414 . A . PASS END=87716414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:28,0 chr1 87716415 . C . PASS END=87716420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 87797699 . A . PASS END=87797704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 87797705 . A . PASS END=87797737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:17,0 chr1 87797738 . A . PASS END=87797738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 87797739 . C . PASS END=87797799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr1 87797800 . T . PASS END=87797800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:11,0 chr1 87797801 . C . PASS END=87797801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 87797802 . T . PASS END=87797802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:12,0 chr1 87797803 . G . PASS END=87797803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 87797804 . C . PASS END=87797806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:14,0 chr1 87797807 . T . PASS END=87797846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,458:0,36,255:13,0 chr1 87797847 . G . PASS END=87797847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 87797848 . C . PASS END=87797859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 87797860 . G . PASS END=87797872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 87797873 . G . PASS END=87797874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 87797875 . C . PASS END=87797880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 87797881 . C . PASS END=87797925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 87797926 . C . PASS END=87797934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 87805219 . G . PASS END=87805238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1207:0,89,255:37,0 chr1 87805239 . C . PASS END=87805239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:35,0 chr1 87805240 . T . PASS END=87805299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1305:0,93,255:40,0 chr1 87805300 . T . PASS END=87805305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:32:0,75,1125:0,83,255:25,0 chr1 87805306 . T . PASS END=87805313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,74,255:25,0 chr1 87805314 . A . PASS END=87805315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 87805730 . T . PASS END=87805730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 87805731 . G . PASS END=87805733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 87805734 . T . PASS END=87805734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 87805735 . T . PASS END=87805735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 87805736 . A . PASS END=87805736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 87805737 . C . PASS END=87805884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1197:0,87,255:40,0 chr1 87805885 . G . PASS END=87805885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 87810471 . G . PASS END=87810479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,158,255:40,0 chr1 88132380 . G T, 225.74 PASS DP=61;MQ=250.00;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,34,0:0,26,0:176:264,179,0,2178,179,2178:255,180,0:0,0:2.2574e+02,1.7574e+02,0.0000e+00,4.5000e+02,2.1051e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,32:0,0,32,28 chr1 89150264 . A . PASS END=89150311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1105:0,85,255:39,0 chr1 89206671 . G . PASS END=89206971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:55:0,102,1530:0,147,255:40,0 chr1 89225905 . A . PASS END=89225905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1241:0,61,255:33,0 chr1 89225906 . T . PASS END=89225938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:36:0,98,1374:0,98,255:40,0 chr1 89225939 . C . PASS END=89225975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,121,255:40,0 chr1 89225976 . T C, 221.55 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,29,0:0,29,0:172:259,175,0,2224,175,2224:255,175,0:0,0:2.2155e+02,1.7155e+02,0.0000e+00,4.5000e+02,2.0632e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,35:0,0,28,30 chr1 89225977 . T . PASS END=89226013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:52:0,120,1800:0,140,255:40,0 chr1 89226014 . A . PASS END=89226036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,150,255:40,0 chr1 89226037 . T . PASS END=89226037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1577:0,75,255:40,0 chr1 89226038 . G . PASS END=89226059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:43:0,105,1596:0,105,255:40,0 chr1 89236035 . G . PASS END=89236066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:37:0,104,1358:0,104,255:40,0 chr1 89236067 . G . PASS END=89236148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:40:0,93,1455:0,93,255:40,0 chr1 89236149 . A . PASS END=89236149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1392:0,79,255:35,0 chr1 89236150 . A . PASS END=89236152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:42:0,88,1488:0,88,255:37,0 chr1 89237104 . C . PASS END=89237249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:32:0,81,1113:0,81,255:40,0 chr1 89237346 . G . PASS END=89237561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:83:43:0,83,1350:0,83,255:40,0 chr1 89237562 . G . PASS END=89237562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:40:0,60,900:0,120,255:20,0 chr1 89246838 . A . PASS END=89246844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:89:0,120,1800:0,255,255:40,0 chr1 89250322 . G . PASS END=89250500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:37:0,84,1260:0,85,255:40,0 chr1 89250501 . T . PASS END=89250507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:33:0,75,1125:0,99,255:26,0 chr1 89251787 . A . PASS END=89251892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:35:0,102,1393:0,105,255:40,0 chr1 89251893 . C . PASS END=89251896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:75:42:0,75,1125:0,126,255:25,0 chr1 89270074 . T . PASS END=89270217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,120,1800:0,126,255:40,0 chr1 89270529 . G . PASS END=89270604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:67:0,120,1800:0,185,255:40,0 chr1 89271180 . G . PASS END=89271189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,604:0,48,255:18,0 chr1 89271190 . T . PASS END=89271204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:61:22:0,61,754:0,61,255:26,0 chr1 89271205 . A . PASS END=89271208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 89271209 . A . PASS END=89271209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:25,0 chr1 89271210 . A . PASS END=89271493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:31:0,83,1127:0,83,255:40,0 chr1 89271574 . T C, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.646;ReadPosRankSum=0.761;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,30,0:0.500,0.000:60:15,14,0:15,16,0:48:85,0,50,1071,970,2040:255,0,255:26,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,9,21:14,16,19,11 chr1 89271575 . G . PASS END=89271611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:58:0,120,1800:0,167,255:40,0 chr1 89271612 . C . PASS END=89271700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:32:0,81,1215:0,96,255:40,0 chr1 89272996 . G . PASS END=89273126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,165,255:40,0 chr1 89273212 . A . PASS END=89273287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,139,255:40,0 chr1 89273367 . G . PASS END=89273458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:46:0,118,1800:0,118,255:40,0 chr1 89279240 . C . PASS END=89279250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,99,1629:0,99,255:40,2 chr1 89279251 . A . PASS END=89279251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1552:0,69,255:40,2 chr1 89279252 . A . PASS END=89279416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:41:0,93,1395:0,100,255:40,0 chr1 89287624 . A . PASS END=89287686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:62:0,120,1800:0,148,255:40,0 chr1 89289993 . A . PASS END=89289997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:64:0,120,1800:0,176,255:40,1 chr1 89289998 . T . PASS END=89290069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:63:0,120,1800:0,159,255:40,0 chr1 89294164 . G . PASS END=89294164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 89294165 . A . PASS END=89294165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 89294166 . A . PASS END=89294306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1049:0,87,255:40,0 chr1 89294693 . A . PASS END=89294704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 89298427 . T . PASS END=89298534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,99,1485:0,147,255:40,0 chr1 89298760 . C . PASS END=89298840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,111,1597:0,111,255:40,0 chr1 89298928 . C . PASS END=89299131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:51:0,120,1800:0,140,255:40,0 chr1 89318896 . T . PASS END=89318896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1196:0,96,255:32,0 chr1 89318897 . T . PASS END=89318897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 89318898 . A . PASS END=89319016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:31:0,87,1142:0,93,255:40,0 chr1 89319017 . A . PASS END=89319017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 89319018 . T . PASS END=89319020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 89319021 . C . PASS END=89319021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 89319022 . T . PASS END=89319029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1025:0,87,255:29,0 chr1 89322889 . C . PASS END=89322889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 89322890 . T . PASS END=89322890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 89322891 . T . PASS END=89322891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,550:0,20,255:16,0 chr1 89322892 . T . PASS END=89322917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:19,0 chr1 89322918 . T . PASS END=89322933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,677:0,60,255:23,0 chr1 89322934 . T . PASS END=89322934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 89322935 . A . PASS END=89322944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:24,0 chr1 89322945 . G . PASS END=89322953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr1 89322954 . A . PASS END=89322954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 89322955 . T . PASS END=89322981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1057:0,87,255:33,0 chr1 89322982 . G A, 151.87 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,11,0:0,24,0:102:190,105,0,1302,105,1302:255,108,0:0,0:1.5187e+02,1.0187e+02,0.0000e+00,4.5000e+02,1.3664e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,11:0,0,16,19 chr1 89322983 . T . PASS END=89322983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:35,0 chr1 89322984 . T . PASS END=89323019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:92:35:0,92,1304:0,92,255:40,0 chr1 89323020 . T . PASS END=89323170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:34:0,93,1395:0,102,255:40,0 chr1 89325565 . C . PASS END=89325694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,103,1682:0,103,255:40,0 chr1 89325823 . A . PASS END=89325969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:46:0,90,1350:0,108,255:40,0 chr1 89329664 . C . PASS END=89329797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:38:0,89,1354:0,89,255:40,0 chr1 89352944 . C . PASS END=89353050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,121,255:40,0 chr1 89357166 . C . PASS END=89357170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 89357171 . G . PASS END=89357171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:24,0 chr1 89357172 . G . PASS END=89357176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,907:0,62,255:26,0 chr1 89357177 . C . PASS END=89357180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 89357181 . A . PASS END=89357182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 89401866 . T . PASS END=89401928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:66:0,120,1800:0,198,255:40,0 chr1 89408688 . T . PASS END=89408774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:52:0,120,1800:0,156,255:40,0 chr1 89409033 . C . PASS END=89409106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,184,255:40,0 chr1 89414774 . C . PASS END=89414960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:37:0,81,1260:0,81,255:40,0 chr1 89418746 . C . PASS END=89418835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,132,255:40,0 chr1 89420832 . C . PASS END=89420908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,156,255:40,0 chr1 89426850 . C . PASS END=89426864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,120,255:40,0 chr1 89426865 . T . PASS END=89426901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:52:0,120,1800:0,123,255:40,0 chr1 89426902 . G A, 48.18 PASS DP=65;MQ=250.00;MQRankSum=6.856;ReadPosRankSum=4.325;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,28,0:0.431,0.000:65:16,16,0:21,12,0:47:83,0,50,944,1323,2267:255,0,255:37,0:4.8183e+01,8.7754e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,18,15,13:20,17,17,11 chr1 89426903 . C . PASS END=89426939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:71:0,120,1800:0,205,255:40,0 chr1 89426940 . C . PASS END=89426970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,200,255:40,0 chr1 89427064 . C . PASS END=89427189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:67:0,120,1800:0,170,255:40,0 chr1 89427742 . A . PASS END=89427828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:49:0,120,1800:0,147,255:40,0 chr1 89430512 . T . PASS END=89430661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:40:0,102,1530:0,119,255:40,0 chr1 89434353 . A . PASS END=89434497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:42:0,120,1800:0,126,255:40,0 chr1 89435092 . C . PASS END=89435150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:82:0,120,1800:0,246,255:40,0 chr1 89448337 . C . PASS END=89448353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,682:0,51,255:19,0 chr1 89448354 . C . PASS END=89448383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,737:0,60,255:26,0 chr1 89448384 . G . PASS END=89448390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr1 89448391 . A . PASS END=89448392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1086:0,74,255:26,0 chr1 89448393 . C . PASS END=89449465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:80:32:0,80,1161:0,80,255:40,0 chr1 89449466 . A . PASS END=89449507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:69:0,120,1800:0,153,255:40,1 chr1 89449508 . A . LowGQ END=89449509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,18:71:0:69:0,0,1300:255,0,255:40,21 chr1 89453935 . A . PASS END=89454027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:32:0,84,1260:0,86,255:40,0 chr1 89454028 . A . PASS END=89454033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1035:0,65,255:29,0 chr1 89473407 . T . PASS END=89473440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:71:0,120,1800:0,197,255:40,0 chr1 89473441 . G . PASS END=89473441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,6:101:71:101:0,71,3200:0,71,255:40,9 chr1 89473442 . T . PASS END=89473442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,8:103:51:103:0,51,3153:0,51,255:40,2 chr1 89473443 . T . PASS END=89473535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,4:105:99:66:0,120,1800:0,182,255:40,1 chr1 89474573 . T . PASS END=89474823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,108,1407:0,116,255:40,0 chr1 89475075 . C . PASS END=89475075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1034:0,90,255:30,0 chr1 89475076 . T . PASS END=89475076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 89475077 . T . PASS END=89475085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1057:0,80,255:32,0 chr1 89475086 . T . PASS END=89475086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr1 89475087 . T . PASS END=89475177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1166:0,81,255:40,0 chr1 89476587 . C . PASS END=89476590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 89476591 . A . PASS END=89476799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:81:27:0,81,1024:0,81,255:40,0 chr1 89477430 . C . PASS END=89477430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 89477431 . G . PASS END=89477452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,786:0,63,255:22,0 chr1 89477453 . G . PASS END=89477453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:20,0 chr1 89477454 . G . PASS END=89477460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 89477461 . T . PASS END=89477685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:28:0,84,1017:0,84,255:40,0 chr1 89477686 . T . PASS END=89477689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 89477690 . T . PASS END=89477707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,54,255:19,0 chr1 89477708 . G . PASS END=89477710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 89478868 . G . PASS END=89478868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 89478869 . A . PASS END=89478869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 89478870 . G . PASS END=89478915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1255:0,89,255:35,0 chr1 89478916 . T . PASS END=89478916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:31,0 chr1 89478917 . G . PASS END=89479092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:36:0,88,1335:0,88,255:40,0 chr1 89479093 . T . PASS END=89479093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:35,0 chr1 89479094 . A . PASS END=89479106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1250:0,89,255:35,0 chr1 89479107 . G . PASS END=89479110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,102,255:26,0 chr1 89479766 . C . PASS END=89479769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:21,0 chr1 89479770 . C . PASS END=89479773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 89479774 . A . PASS END=89479774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,587:0,27,255:19,0 chr1 89479775 . G . PASS END=89479782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:25,0 chr1 89479783 . G . PASS END=89479783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:28,0 chr1 89479784 . A . PASS END=89479788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 89479789 . T . PASS END=89479789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 89479790 . C . PASS END=89479790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 89479791 . C . PASS END=89479791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 89479792 . A . PASS END=89479792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 89479793 . G . PASS END=89479793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 89479794 . G . PASS END=89479962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:35:0,102,1304:0,105,255:40,0 chr1 89480088 . A . PASS END=89480113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:108:0,120,1800:0,246,255:40,0 chr1 89480229 . C . PASS END=89480339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:41:0,114,1595:0,116,255:40,0 chr1 89480970 . C . PASS END=89480972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:26,0 chr1 89480973 . C . PASS END=89480979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr1 89480980 . T . PASS END=89480980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:26,0 chr1 89480981 . C . PASS END=89480981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 89480982 . T . PASS END=89480982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 89480983 . C . PASS END=89480993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:30,0 chr1 89480994 . A . PASS END=89480994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:29,0 chr1 89480995 . G . PASS END=89481097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1260:0,88,255:40,0 chr1 89486114 . T . PASS END=89486368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:34:0,80,1303:0,80,255:40,0 chr1 89486369 . G . PASS END=89486382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,1035:0,60,255:26,0 chr1 89486383 . T . PASS END=89486383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:22,0 chr1 89486384 . C . PASS END=89486385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 89486386 . T . PASS END=89486386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:22,0 chr1 89486387 . G . PASS END=89486388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:23,0 chr1 89486389 . G . PASS END=89486389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:22,0 chr1 89486390 . G . PASS END=89486402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 89486403 . A . PASS END=89486404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,49,255:16,0 chr1 89519038 . T . PASS END=89519151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,141,255:40,0 chr1 89520365 . C . PASS END=89520376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:26,0 chr1 89520377 . A . PASS END=89520380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 89520381 . A . PASS END=89520382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 89520383 . G . PASS END=89520383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 89520384 . G . PASS END=89520558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:30:0,84,1260:0,90,255:40,0 chr1 89520796 . C . PASS END=89520803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 89520804 . T . PASS END=89520804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 89520805 . C . PASS END=89520807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:16,0 chr1 89520808 . T . PASS END=89520808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 89520809 . T . PASS END=89520824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:47:16:0,47,560:0,47,255:19,0 chr1 89520825 . G . PASS END=89520829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 89520830 . G . PASS END=89520830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 89520831 . T . PASS END=89520832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 89520833 . T . PASS END=89520833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr1 89520834 . G . PASS END=89520838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 89520839 . G . PASS END=89520840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 89520841 . G . PASS END=89520848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89520849 . T . PASS END=89520859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 89520860 . C . PASS END=89520860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89520861 . T . PASS END=89520861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 89520862 . C . PASS END=89520863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 89520864 . T . PASS END=89520864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 89520865 . T . PASS END=89520890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,890:0,81,255:28,0 chr1 89520891 . T . PASS END=89520891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:26,0 chr1 89520892 . C . PASS END=89520898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 89521699 . C . PASS END=89521911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:34:0,85,1230:0,85,255:40,0 chr1 89522537 . C . PASS END=89522537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 89522538 . G . PASS END=89522538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 89522539 . C . PASS END=89522543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89522544 . T . PASS END=89522544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 89522545 . C . PASS END=89522548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 89522549 . T . PASS END=89522549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 89522550 . T . PASS END=89522792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:30:0,80,1125:0,80,255:40,0 chr1 89522793 . T . PASS END=89522803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:32:0,60,900:0,96,255:26,0 chr1 89522804 . C . PASS END=89522806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 89522807 . G . PASS END=89522817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:30:20:0,30,450:0,60,255:11,0 chr1 89523675 . G . PASS END=89523873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:33:0,99,1264:0,99,255:40,0 chr1 89523874 . A . PASS END=89523877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:35,0 chr1 89523878 . A . PASS END=89523906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,824:0,61,255:26,0 chr1 89523907 . T . PASS END=89523910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 89523911 . C T, 49.25 PASS DP=23;MQ=243.27;MQRankSum=2.140;ReadPosRankSum=1.271;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,10,0:0.435,0.000:23:6,7,0:7,3,0:48:84,0,50,350,428,778:255,0,255:12,0:4.9249e+01,7.3258e-05,5.3000e+01,3.4975e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,10,3,7:4,9,4,6 chr1 89523912 . T . PASS END=89523917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:17,0 chr1 89524524 . C . PASS END=89524524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 89524525 . T . PASS END=89524525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 89524526 . T . PASS END=89524526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:28,0 chr1 89524527 . T . PASS END=89524726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:90:30:0,90,1133:0,90,255:40,0 chr1 89524858 . A . PASS END=89524883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:92:0,120,1800:0,188,255:40,0 chr1 89525000 . T . PASS END=89525109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,101,1449:0,101,255:40,0 chr1 89525880 . C . PASS END=89525985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,81,255:40,0 chr1 89525986 . A . PASS END=89526001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:26:0,63,945:0,77,255:24,0 chr1 89526002 . A . PASS END=89526002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:20,0 chr1 89526003 . G . PASS END=89526007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 89528728 . C . PASS END=89528905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:33:0,84,1156:0,85,255:40,0 chr1 89528906 . C . PASS END=89528917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,65,255:26,0 chr1 89573858 . T . PASS END=89573974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:50:0,120,1800:0,150,255:40,0 chr1 89575360 . C . PASS END=89575553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:92:33:0,92,1249:0,92,255:40,0 chr1 89575847 . C . PASS END=89575949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,143,255:40,0 chr1 89578155 . C . PASS END=89578367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:31:0,80,1082:0,80,255:40,0 chr1 89579699 . C . PASS END=89579712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 89579713 . G . PASS END=89579722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,862:0,63,255:26,0 chr1 89579723 . G . PASS END=89579903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:27:0,80,964:0,80,255:40,1 chr1 89579904 . A . PASS END=89579940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1395:0,105,255:40,0 chr1 89579941 . T C, 40.60 PASS DP=34;MQ=154.17;MQRankSum=-0.699;ReadPosRankSum=2.246;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,11,0:0.324,0.000:34:14,4,0:9,7,0:40:75,0,50,393,823,1216:255,0,255:21,0:4.0600e+01,3.9996e-04,5.3000e+01,3.9304e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,2,9:9,14,5,6 chr1 89579942 . G . PASS END=89579949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 89579950 . T . PASS END=89579966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 89579967 . A . PASS END=89579967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 89579968 . G . PASS END=89579968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 89579969 . G . PASS END=89579978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:23:0,42,630:0,69,255:14,0 chr1 89579979 . C . PASS END=89579979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr1 89582675 . G . PASS END=89582689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,114,1435:0,114,255:40,0 chr1 89582690 . G C, 48.92 PASS DP=45;MQ=250.00;MQRankSum=5.699;ReadPosRankSum=-0.445;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,20,0:0.444,0.000:45:9,12,0:16,8,0:47:84,0,50,708,891,1606:255,0,255:24,0:4.8923e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,10,14,6:9,16,12,8 chr1 89582691 . A . PASS END=89582727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,111,1674:0,111,255:40,0 chr1 89582728 . A . PASS END=89582885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1260:0,102,255:40,0 chr1 89582886 . A . PASS END=89582910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 89582911 . T . PASS END=89582917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:25:0,45,675:0,75,255:18,0 chr1 89583260 . C . PASS END=89583262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:30,0 chr1 89583263 . T . PASS END=89583263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 89583264 . T . PASS END=89583456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:30:0,87,1081:0,90,255:40,0 chr1 89585862 . T . PASS END=89585971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,99,1468:0,108,255:40,0 chr1 89586826 . C . PASS END=89586832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:25,0 chr1 89586833 . A . PASS END=89586833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 89586834 . T . PASS END=89586834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr1 89586835 . A . PASS END=89586835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 89586836 . T . PASS END=89586836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,852:0,36,255:24,0 chr1 89586837 . C . PASS END=89586845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:26,0 chr1 89586846 . C . PASS END=89586849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89586850 . A . PASS END=89586850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:25,0 chr1 89586851 . G . PASS END=89586852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 89586853 . G . PASS END=89586853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 89586854 . T . PASS END=89586858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1089:0,90,255:31,0 chr1 89586859 . C . PASS END=89586859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 89586860 . A . PASS END=89586865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1149:0,93,255:35,0 chr1 89586866 . A . PASS END=89586866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:32,0 chr1 89586867 . G . PASS END=89586926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1172:0,88,255:34,0 chr1 89586927 . A . PASS END=89586936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,73,255:26,0 chr1 89586937 . G . PASS END=89586946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:21:0,42,630:0,63,255:16,0 chr1 89586947 . G . PASS END=89586952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr1 89586953 . C . PASS END=89586953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:11,0 chr1 89587460 . C . PASS END=89587488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:24,0 chr1 89587489 . A . PASS END=89587489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 89587490 . G . PASS END=89587493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 89587494 . G . PASS END=89587640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1103:0,86,255:40,0 chr1 89587641 . T . PASS END=89587641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr1 89587642 . G . PASS END=89587642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 89587643 . G . PASS END=89587649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:25,0 chr1 89597832 . T . PASS END=89597836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 89597837 . T . PASS END=89597837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 89597838 . T . PASS END=89597838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 89597839 . A . PASS END=89597839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 89597840 . T . PASS END=89597863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,719:0,66,255:24,0 chr1 89597864 . G . PASS END=89598071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1063:0,84,255:40,0 chr1 89598072 . C . PASS END=89598075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:25,0 chr1 89598076 . T . PASS END=89598086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:24:0,45,675:0,72,255:19,0 chr1 89598941 . C . PASS END=89598941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 89598942 . T . PASS END=89598945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr1 89598946 . T . PASS END=89598946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,980:0,59,255:29,0 chr1 89598947 . C . PASS END=89598963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1047:0,80,255:35,0 chr1 89598964 . T . PASS END=89598964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1205:0,56,255:33,0 chr1 89598965 . T . PASS END=89598970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1251:0,97,255:37,0 chr1 89598971 . T . PASS END=89598971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1402:0,65,255:36,0 chr1 89598972 . T . PASS END=89598975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:90:41:0,90,1368:0,90,255:40,0 chr1 89598976 . T . PASS END=89599012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:44:0,86,1524:0,86,255:40,0 chr1 89599013 . G T, 45.48 PASS DP=50;MQ=250.00;MQRankSum=5.838;ReadPosRankSum=1.816;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,19,0:0.388,0.000:49:14,9,0:16,10,0:45:80,0,50,635,1073,1708:255,0,255:29,0:4.5477e+01,1.4470e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,12,5,14:16,14,13,6 chr1 89599014 . A . PASS END=89599050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,117,1723:0,117,255:40,0 chr1 89599051 . C . PASS END=89599115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,105,1575:0,118,255:40,0 chr1 89599116 . T . PASS END=89599129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:29:0,69,1035:0,87,255:26,0 chr1 89599130 . C . PASS END=89599130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr1 89599131 . T . PASS END=89599134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 89607229 . C . PASS END=89607331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:31:0,90,1119:0,90,255:40,0 chr1 89613250 . C . PASS END=89613250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 89613251 . T . PASS END=89613251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 89613252 . T . PASS END=89613257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 89613258 . C . PASS END=89613263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 89613264 . T . PASS END=89613264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 89613265 . G . PASS END=89613265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89613266 . G . PASS END=89613266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 89613267 . G . PASS END=89613268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 89613269 . A . PASS END=89613269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 89613270 . C . PASS END=89613279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1305:0,90,255:40,0 chr1 89613280 . G A, 49.93 PASS DP=43;MQ=250.00;MQRankSum=5.600;ReadPosRankSum=2.175;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,21,0:0.488,0.000:43:7,12,0:15,9,0:48:85,0,50,690,771,1461:255,0,255:22,0:4.9933e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,8,18,3:7,15,9,12 chr1 89613281 . T . PASS END=89613317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:42:0,106,1759:0,106,255:40,0 chr1 89613318 . T . PASS END=89613460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:41:0,92,1204:0,92,255:40,0 chr1 89613461 . T . PASS END=89613461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1116:0,70,255:34,0 chr1 89613462 . C . PASS END=89613462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 89614975 . C . PASS END=89614992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 89614993 . T . PASS END=89614993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 89614994 . T . PASS END=89614999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 89615000 . C . PASS END=89615000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 89615001 . T . PASS END=89615006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr1 89615007 . C . PASS END=89615007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 89615008 . T . PASS END=89615013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,837:0,69,255:25,0 chr1 89615014 . G . PASS END=89615211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1215:0,90,255:40,0 chr1 89615212 . A . PASS END=89615231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 89615232 . A . PASS END=89615255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 89616013 . G . PASS END=89616016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:30,0 chr1 89616017 . T . PASS END=89616258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:30:0,90,1103:0,90,255:40,0 chr1 89617951 . C . PASS END=89617959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,893:0,72,255:25,0 chr1 89617960 . G . PASS END=89618141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:28:0,81,1039:0,84,255:40,0 chr1 89618142 . A . PASS END=89618142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 89618143 . C . PASS END=89618143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 89618144 . G . PASS END=89618147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,102,255:26,0 chr1 89618351 . T . PASS END=89618423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:84:37:0,84,1373:0,84,255:40,0 chr1 89618424 . C . PASS END=89618444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:93:51:0,93,1395:0,100,255:40,0 chr1 89618445 . C . PASS END=89618449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:42:51:0,42,630:0,103,255:17,0 chr1 89618450 . T . PASS END=89618456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:33:38:0,33,495:0,59,255:12,0 chr1 89618457 . C . PASS END=89618460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:15:38:0,15,225:0,75,255:5,0 chr1 89630414 . C . PASS END=89630420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,646:0,57,255:19,0 chr1 89630421 . A . PASS END=89630421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 89630422 . T . PASS END=89630422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,639:0,29,255:19,0 chr1 89630423 . A . PASS END=89630425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr1 89630426 . A . PASS END=89630431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 89630432 . G . PASS END=89630432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr1 89630433 . C . PASS END=89630440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 89630441 . G . PASS END=89630441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 89630442 . T . PASS END=89630472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1049:0,87,255:33,0 chr1 89630473 . A . PASS END=89630473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr1 89630474 . G . PASS END=89630519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:33,0 chr1 89630520 . A . PASS END=89630541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:22:0,63,945:0,66,255:25,0 chr1 89637429 . C . PASS END=89637469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:33:0,99,1164:0,99,255:37,0 chr1 89637470 . C . PASS END=89637470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr1 89637471 . C . PASS END=89637540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:36:0,96,1327:0,104,255:38,0 chr1 89637541 . T . PASS END=89637560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,95,255:34,0 chr1 89637561 . G . PASS END=89637561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:31,0 chr1 89637562 . C . PASS END=89637577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,96,255:33,0 chr1 89637578 . G A, 49.01 PASS DP=32;MQ=245.44;MQRankSum=0.133;ReadPosRankSum=3.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:11,7,0:7,7,0:48:84,0,50,501,615,1116:255,0,255:15,0:4.9007e+01,7.6364e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,15,6,8:10,8,5,9 chr1 89637579 . T . PASS END=89637584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 89637585 . A . PASS END=89637585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 89637586 . C . PASS END=89637593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 89637594 . C . PASS END=89637609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr1 89637610 . T . PASS END=89637610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 89637611 . G . PASS END=89637615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 89637616 . C . PASS END=89637616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 89637617 . A . PASS END=89637618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr1 89650937 . T . PASS END=89651152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:54:0,120,1800:0,132,255:40,0 chr1 89652016 . C . PASS END=89652203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:39:0,84,1260:0,90,255:40,0 chr1 89652204 . G . PASS END=89652206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:39:0,72,1080:0,117,255:26,0 chr1 89652207 . C . PASS END=89652209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,111,255:27,0 chr1 89652683 . C . PASS END=89652785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:35:0,90,1350:0,90,255:40,0 chr1 89654265 . C . PASS END=89654466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:37:0,87,1305:0,95,255:40,0 chr1 89654467 . T . PASS END=89654467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 89654468 . C . PASS END=89654469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:27,0 chr1 89654470 . A . PASS END=89654472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 89654473 . G . PASS END=89654477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 89655721 . C . PASS END=89655728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 89655729 . T . PASS END=89655729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 89655730 . C . PASS END=89655732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 89655733 . C . PASS END=89655733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 89655734 . T . PASS END=89655737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 89655738 . A . PASS END=89655744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 89655745 . G . PASS END=89655749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 89655750 . C . PASS END=89655752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 89655753 . C . PASS END=89655753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 89655754 . C . PASS END=89655762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 89655763 . G . PASS END=89655785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:18,0 chr1 89655786 . C . PASS END=89655786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 89655787 . T C, 50.00 PASS DP=18;MQ=218.00;MQRankSum=2.107;ReadPosRankSum=1.639;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,12,0:0.667,0.000:18:5,7,0:1,5,0:46:85,0,46,429,215,644:255,0,178:6,0:5.0000e+01,1.0380e-04,4.8572e+01,4.2924e+02,2.4936e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,7,5:2,4,8,4 chr1 89655788 . T . PASS END=89655803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:19,0 chr1 89655804 . C . PASS END=89655824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:24,0 chr1 89655825 . G . PASS END=89655832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr1 89655833 . T . PASS END=89655835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 89655836 . G . PASS END=89655836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 89655837 . T . PASS END=89655839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 89655840 . G . PASS END=89655840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 89655841 . G . PASS END=89655845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 89655846 . T . PASS END=89655846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 89655847 . C . PASS END=89655849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 89655850 . T . PASS END=89655850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 89655851 . T . PASS END=89655851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:26,0 chr1 89655852 . G . PASS END=89655879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1103:0,90,255:32,0 chr1 89655880 . G . PASS END=89655880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 89655881 . G . PASS END=89655944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:34,0 chr1 89655945 . A . PASS END=89655956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:28:0,69,1035:0,84,255:26,0 chr1 89655957 . C . PASS END=89655966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 89655967 . G . PASS END=89655972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:19,0 chr1 89655973 . T . PASS END=89655976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 89655977 . T . PASS END=89655977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:14,0 chr1 89655978 . A . PASS END=89655981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:20:0,39,585:0,60,255:13,0 chr1 89655982 . C . PASS END=89655982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 89655983 . A . PASS END=89655983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 89655984 . C . PASS END=89655993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 89655994 . C T, 39.77 PASS DP=15;MQ=246.93;MQRankSum=2.062;ReadPosRankSum=0.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,6,0:0.400,0.000:15:1,2,0:8,4,0:40:75,0,50,211,314,525:165,0,255:9,0:3.9773e+01,4.7943e-04,5.3000e+01,2.1061e+02,3.4868e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,0,6:5,4,4,2 chr1 89655995 . C . PASS END=89655996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 89655997 . C . PASS END=89656001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 89656944 . G . PASS END=89656946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 89656947 . T . PASS END=89657148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:30:0,81,1215:0,90,255:40,0 chr1 89657149 . C . PASS END=89657189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 89658587 . C . PASS END=89658783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:84:33:0,84,1260:0,87,255:40,0 chr1 89658986 . T . PASS END=89659091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,114,1622:0,114,255:40,0 chr1 89659092 . T . PASS END=89659095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,99,1485:0,129,255:36,0 chr1 89660980 . C . PASS END=89660985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1124:0,84,255:29,0 chr1 89660986 . T . PASS END=89660986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 89660987 . A . PASS END=89660987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 89660988 . C . PASS END=89660988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 89660989 . A . PASS END=89660989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 89660990 . T . PASS END=89661082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1186:0,83,255:39,0 chr1 89661083 . T . PASS END=89661083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 89661084 . G . PASS END=89661089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:27,0 chr1 89661090 . T . PASS END=89661107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:26:0,61,908:0,61,255:25,0 chr1 89662793 . C . PASS END=89662987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:98:37:0,98,1358:0,98,255:40,0 chr1 89664478 . C . PASS END=89664517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,117,1496:0,117,255:40,0 chr1 89726387 . T . PASS END=89726500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,120,1800:0,123,255:40,0 chr1 89727903 . C . PASS END=89728084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:41:0,96,1491:0,96,255:40,0 chr1 89728366 . C . PASS END=89728368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 89728369 . T . PASS END=89728369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 89728370 . C . PASS END=89728374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 89728375 . T . PASS END=89728386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,915:0,64,255:25,0 chr1 89728387 . C . PASS END=89728453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1017:0,81,255:40,0 chr1 89728454 . C . PASS END=89728454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr1 89728455 . A . PASS END=89728468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:37:0,100,1238:0,100,255:39,0 chr1 89729419 . C . PASS END=89729631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:96:37:0,96,1440:0,111,255:40,0 chr1 89730369 . C . PASS END=89730371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr1 89730372 . C . PASS END=89730372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 89730373 . A . PASS END=89730392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,637:0,41,255:19,0 chr1 89730393 . G . PASS END=89730430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:24,0 chr1 89730431 . T . PASS END=89730431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 89730432 . G . PASS END=89730434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 89730435 . C . PASS END=89730435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 89730436 . T . PASS END=89730447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 89730448 . G . PASS END=89730449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 89730450 . C . PASS END=89730461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,82,255:26,0 chr1 89730462 . C . PASS END=89730464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 89730465 . C . PASS END=89730467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 89730468 . C . PASS END=89730468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 89730469 . T . PASS END=89730469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 89730470 . C . PASS END=89730474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 89730475 . A . PASS END=89730476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 89730477 . G . PASS END=89730480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 89730481 . T . PASS END=89730484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 89730485 . T . PASS END=89730498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:27,0 chr1 89730499 . T . PASS END=89730499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 89730500 . T . PASS END=89730505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 89730506 . C . PASS END=89730550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr1 89730551 . A . PASS END=89730553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,792:0,30,255:22,0 chr1 89730554 . T . PASS END=89730555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr1 89730556 . T . PASS END=89730556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,654:0,27,255:21,0 chr1 89730557 . C . PASS END=89730578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,776:0,66,255:22,0 chr1 89730579 . T . PASS END=89730595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 89730596 . G . PASS END=89730598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:34:17:0,34,582:0,34,255:13,0 chr1 89730599 . G . PASS END=89730599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 89730600 . A . PASS END=89730623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 89730624 . A . PASS END=89730624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 89730625 . T . PASS END=89730626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 89730627 . G . PASS END=89730627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 89730628 . G . PASS END=89730634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 89730635 . C . PASS END=89730637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 89730638 . G . PASS END=89730638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 89730639 . G . PASS END=89730649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 89732029 . G . PASS END=89732033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:24,0 chr1 89732034 . C . PASS END=89732047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:31,0 chr1 89732048 . G . PASS END=89732048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 89732049 . C . PASS END=89732049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 89732050 . C . PASS END=89732050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr1 89732051 . A . PASS END=89732271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:38:0,114,1369:0,114,255:40,1 chr1 89732640 . C . PASS END=89732643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1268:0,89,255:36,0 chr1 89732644 . C . PASS END=89732644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1235:0,59,255:36,0 chr1 89732645 . T . PASS END=89732814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1215:0,83,255:40,0 chr1 89732815 . A . PASS END=89732819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1125:0,93,255:26,0 chr1 89732820 . T . PASS END=89732821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 89732822 . A . PASS END=89732836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr1 89733100 . T . PASS END=89733209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:46:0,108,1620:0,129,255:40,0 chr1 89734412 . C . PASS END=89734421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1103:0,93,255:32,0 chr1 89734422 . T . PASS END=89734422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:31,0 chr1 89734423 . C . PASS END=89734536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1219:0,90,255:40,0 chr1 89734537 . A . PASS END=89734537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 89734538 . G . PASS END=89734539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 89735049 . C . PASS END=89735051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 89735052 . T . PASS END=89735052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 89735053 . G . PASS END=89735058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:24,0 chr1 89735059 . C . PASS END=89735059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 89735060 . C . PASS END=89735063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:25,0 chr1 89735064 . C . PASS END=89735064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 89735065 . C . PASS END=89735078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,914:0,72,255:26,0 chr1 89735079 . G . PASS END=89735080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89735081 . T . PASS END=89735082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 89735083 . G . PASS END=89735086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 89735087 . T . PASS END=89735087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 89735088 . T . PASS END=89735231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1215:0,84,255:40,0 chr1 89735232 . A . PASS END=89735235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 89735236 . C . PASS END=89735238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:57:30:0,57,855:0,90,255:19,0 chr1 89834111 . A . PASS END=89834154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1133:0,93,255:38,0 chr1 89834155 . A . PASS END=89834155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:38,0 chr1 89834156 . A . PASS END=89834291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,96,255:40,0 chr1 89834292 . A . PASS END=89834292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 89834293 . G . PASS END=89834297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 89834298 . A . PASS END=89834298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 89834299 . T . PASS END=89834299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 89834300 . G . PASS END=89834300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:26,0 chr1 89835105 . G . PASS END=89835203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1086:0,80,255:40,0 chr1 89835204 . A . PASS END=89835208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1139:0,77,255:26,0 chr1 89835209 . G . PASS END=89835209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 89835210 . A . PASS END=89835232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr1 89843662 . G . PASS END=89843666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 89843667 . C . PASS END=89843673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 89843674 . A . PASS END=89843674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:23,0 chr1 89843675 . A . PASS END=89843675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 89843676 . T . PASS END=89843676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:22,0 chr1 89843677 . G . PASS END=89843696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,901:0,62,255:26,0 chr1 89843697 . G . PASS END=89843764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,933:0,80,255:34,0 chr1 89843765 . A . PASS END=89843765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 89843766 . G . PASS END=89843768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 89843769 . G . PASS END=89843771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 89843976 . T . PASS END=89844154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1215:0,82,255:40,0 chr1 89844155 . C . PASS END=89844155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 89844156 . C . PASS END=89844168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 89844169 . C . PASS END=89844172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 89845945 . G . PASS END=89845972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:97:37:0,97,1305:0,97,255:40,0 chr1 89845973 . T . PASS END=89846083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1272:0,84,255:40,0 chr1 89846084 . G . PASS END=89846084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:30,0 chr1 89846085 . C . PASS END=89846100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:32,0 chr1 89846101 . T . PASS END=89846101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:31,0 chr1 89846102 . C . PASS END=89846114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 89846115 . A . PASS END=89846115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 89846116 . A . PASS END=89846122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 89846123 . C . PASS END=89846123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr1 89846124 . T . PASS END=89846125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 89846126 . T . PASS END=89846126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 89846127 . T . PASS END=89846127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 89846128 . C . PASS END=89846130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1015:0,51,255:27,1 chr1 89846131 . A . PASS END=89846148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,922:0,62,255:26,0 chr1 89846149 . G . PASS END=89846149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:22,0 chr1 89846150 . A . PASS END=89846151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 89846152 . C T, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=1.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,16,0:0.571,0.000:28:6,7,0:6,9,0:47:85,0,46,185,185,185:255,0,255:10,0:5.0000e+01,9.5779e-05,4.9182e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,10,2,14:4,8,9,7 chr1 89846153 . C . PASS END=89846153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 89846154 . A . PASS END=89846155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:23,0 chr1 89846156 . G . PASS END=89846159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:22,0 chr1 89846160 . C . PASS END=89846160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:20,0 chr1 89846161 . T . PASS END=89846165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 89846166 . G . PASS END=89846173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,810:0,53,255:19,0 chr1 89846174 . C . PASS END=89846174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 89846175 . A . PASS END=89846176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 89846177 . A . PASS END=89846177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:17,0 chr1 89846178 . G . PASS END=89846189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 89846190 . C . PASS END=89846190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 89847253 . G . PASS END=89847271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr1 89847272 . G . PASS END=89847279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:18,0 chr1 89847280 . T . PASS END=89847280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 89847281 . A . PASS END=89847297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:19,0 chr1 89847298 . G . PASS END=89847334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,786:0,63,255:26,0 chr1 89847335 . G . PASS END=89847340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:26,0 chr1 89847341 . G . PASS END=89847354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:83:28:0,83,835:0,83,255:28,0 chr1 89847355 . C . PASS END=89847361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 89847362 . G . PASS END=89847367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:27,0 chr1 89847368 . G . PASS END=89847368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 89847369 . G . PASS END=89847369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 89847370 . C . PASS END=89847371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89847372 . G T, 130.33 PASS DP=28;MQ=237.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,15,0:0,13,0:80:168,83,0,268,268,268:255,84,0:0,0:1.3033e+02,8.0329e+01,0.0000e+00,2.6510e+02,2.9987e+02,2.6811e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,20,8:0,0,11,17 chr1 89847373 . C . PASS END=89847377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89847378 . T . PASS END=89847378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 89847379 . A . PASS END=89847383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr1 89847384 . A . PASS END=89847395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,992:0,68,255:26,0 chr1 89847396 . G . PASS END=89847396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 89847397 . C . PASS END=89847410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,969:0,75,255:26,0 chr1 89847411 . C T, 130.35 PASS DP=28;MQ=223.77;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,12,0:0,16,0:80:168,83,0,1027,83,1027:255,84,0:0,0:1.3035e+02,8.0354e+01,0.0000e+00,4.5000e+02,1.1512e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,11:0,0,11,17 chr1 89847412 . T . PASS END=89847443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,990:0,65,255:25,0 chr1 89847444 . A G, 128.26 PASS DP=27;MQ=219.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,11,0:0,16,0:78:166,81,0,1047,81,1047:255,81,0:0,0:1.2826e+02,7.8263e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,12:0,0,15,12 chr1 89847445 . T . PASS END=89847451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 89847452 . G . PASS END=89847454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr1 89847455 . C . PASS END=89847456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 89847457 . G . PASS END=89847457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 89847458 . T . PASS END=89847475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 89847476 . A . PASS END=89847476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr1 89847477 . A . PASS END=89847478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 89847479 . C . PASS END=89847479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 89847480 . T . PASS END=89847481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 89847482 . C . PASS END=89847506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr1 89847507 . A . PASS END=89847507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 89847508 . A . PASS END=89847527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 89847528 . T . PASS END=89847528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,630:0,49,255:19,0 chr1 89847529 . T . PASS END=89847533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 89848223 . G . PASS END=89848227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:23,0 chr1 89848228 . C . PASS END=89848228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 89848229 . A . PASS END=89848233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:25,0 chr1 89848234 . G . PASS END=89848235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 89848236 . A . PASS END=89848245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:26,0 chr1 89848246 . G . PASS END=89848250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 89848251 . T . PASS END=89848251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,887:0,70,255:28,0 chr1 89848252 . C . PASS END=89848424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1080:0,87,255:40,0 chr1 89848425 . A . PASS END=89848425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr1 89848426 . A . PASS END=89848433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1225:0,86,255:31,0 chr1 89848434 . A . PASS END=89848434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1172:0,71,255:26,0 chr1 89848435 . G . PASS END=89848435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 89849211 . G . PASS END=89849215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:37,0 chr1 89849216 . A . PASS END=89849216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:36,0 chr1 89849217 . G . PASS END=89849238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,108,1597:0,114,255:40,0 chr1 89849239 . A . PASS END=89849312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,105,255:40,0 chr1 89849313 . G . PASS END=89849313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 89849574 . G A, 48.52 PASS DP=61;MQ=249.75;MQRankSum=6.586;ReadPosRankSum=4.915;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,26,0:0.433,0.000:60:16,12,0:18,14,0:47:83,0,50,927,1216,2143:255,0,255:34,0:4.8525e+01,8.2836e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,14,15,11:16,18,15,11 chr1 89849652 . T . PASS END=89849704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,143,255:40,0 chr1 89849705 . A . PASS END=89849741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,178,255:40,0 chr1 89849742 . A T, 265.79 PASS DP=73;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,73,0:1.000,0.000:73:0,38,0:0,35,0:216:304,219,0,2769,219,2769:255,219,0:0,0:2.6579e+02,2.1579e+02,0.0000e+00,4.5000e+02,2.5056e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,39:0,0,41,32 chr1 89849743 . T . PASS END=89849779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,179,255:40,0 chr1 89849780 . A . PASS END=89849845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,99,1485:0,104,255:40,0 chr1 89850789 . G . PASS END=89850995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:40:0,100,1465:0,100,255:40,0 chr1 89850996 . T . PASS END=89850996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1566:0,66,255:39,0 chr1 89850997 . C . PASS END=89851012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:41:0,85,1355:0,85,255:40,0 chr1 89851013 . T . PASS END=89851013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1393:0,51,255:32,0 chr1 89851014 . A . PASS END=89851017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:84:41:0,84,1409:0,84,255:34,0 chr1 89851018 . T . PASS END=89851018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1402:0,54,255:32,0 chr1 89851019 . C . PASS END=89851023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1426:0,87,255:35,0 chr1 89851024 . T . PASS END=89851024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1176:0,66,255:34,0 chr1 89851025 . T . PASS END=89851025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1341:0,81,255:35,0 chr1 89851026 . T . PASS END=89851026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 89851027 . A . PASS END=89851028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1350:0,81,255:30,0 chr1 90045151 . A . PASS END=90045213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,138,255:40,0 chr1 90048210 . A . PASS END=90048229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:34:0,94,1268:0,94,255:39,0 chr1 90048230 . A . PASS END=90048230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1272:0,62,255:37,0 chr1 90048231 . A . PASS END=90048248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:39:0,82,1293:0,82,255:40,0 chr1 90048249 . C . PASS END=90048249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:50:44:0,50,1060:0,50,255:39,0 chr1 90048250 . A . PASS END=90048493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:88:40:0,88,1397:0,88,255:40,0 chr1 90048494 . T . PASS END=90048494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1676:0,75,255:40,0 chr1 90048495 . G . PASS END=90048663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:82:36:0,82,1260:0,82,255:40,0 chr1 90048664 . T . PASS END=90048664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1247:0,53,255:28,0 chr1 90048665 . T . PASS END=90048672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 90048673 . T . PASS END=90048673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,958:0,62,255:26,0 chr1 90048674 . C . PASS END=90048718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:32,0 chr1 90048719 . A . PASS END=90048720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 90048721 . A . PASS END=90048721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 90048722 . A . PASS END=90048728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 90048729 . G . PASS END=90048737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 90048738 . T . PASS END=90048738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 90048739 . C . PASS END=90048741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 90048742 . T . PASS END=90048742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 90048743 . G . PASS END=90048756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1093:0,90,255:31,0 chr1 90048757 . T . PASS END=90048757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 90048758 . C . PASS END=90048773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 90048774 . T . PASS END=90048774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr1 90048775 . T . PASS END=90049537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:82:32:0,82,1149:0,82,255:40,2 chr1 90049538 . A . PASS END=90049538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:32,0 chr1 90049539 . G . PASS END=90049620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1178:0,83,255:35,0 chr1 90049621 . A . PASS END=90049621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 90049622 . C . PASS END=90049630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:29,0 chr1 90049631 . T . PASS END=90049631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr1 90049632 . C . PASS END=90049632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 90049633 . T . PASS END=90049634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 90049635 . G . PASS END=90049654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,98,255:35,0 chr1 90049655 . G . PASS END=90049655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1263:0,75,255:31,0 chr1 90049656 . G . PASS END=90049674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:33,0 chr1 90049675 . T . PASS END=90049675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:30,0 chr1 90049676 . A . PASS END=90049702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1120:0,86,255:33,0 chr1 90049703 . A . PASS END=90049703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1081:0,68,255:32,0 chr1 90049704 . A . PASS END=90049719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1227:0,99,255:33,0 chr1 90049720 . G . PASS END=90049745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr1 90049746 . A . PASS END=90049746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 90049747 . A . PASS END=90049767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:25,0 chr1 90049768 . G . PASS END=90049771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 90049772 . T . PASS END=90049779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 90049780 . A . PASS END=90049783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:26:0,51,765:0,65,255:18,0 chr1 90049784 . G . PASS END=90049793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,86,255:26,0 chr1 90049794 . A . PASS END=90049808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 90049809 . T . PASS END=90049809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr1 90049810 . T . PASS END=90049837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1105:0,80,255:35,0 chr1 90049838 . G . PASS END=90049838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:33,0 chr1 90049839 . T . PASS END=90050348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:35:0,81,1215:0,81,255:40,0 chr1 90053872 . G . PASS END=90053927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:64:0,120,1800:0,164,255:40,0 chr1 90058330 . A . PASS END=90058330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 90058331 . T . PASS END=90058338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,863:0,62,255:26,0 chr1 90058339 . C . PASS END=90058546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:28:0,83,1031:0,83,255:40,0 chr1 90058547 . A . PASS END=90058547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:35,0 chr1 90058548 . T . PASS END=90058570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1139:0,92,255:36,0 chr1 90058571 . A . PASS END=90058589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,867:0,62,255:23,0 chr1 90058590 . A . PASS END=90058590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 90058591 . G . PASS END=90058591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:18,0 chr1 90058592 . A . PASS END=90058595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:21:0,57,855:0,63,255:19,0 chr1 90058596 . A . PASS END=90058596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 90058597 . T . PASS END=90058597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 90058598 . G . PASS END=90058600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 90058601 . G . PASS END=90058601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 90058602 . A . PASS END=90058602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 90133859 . A . PASS END=90133869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,173,255:40,0 chr1 90152029 . A . PASS END=90152166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:34:0,81,1189:0,86,255:40,0 chr1 90152167 . A . PASS END=90152170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:31:0,75,1125:0,93,255:26,0 chr1 90171861 . G . PASS END=90171872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,120,1535:0,120,255:40,0 chr1 90171873 . A . PASS END=90171899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:42:0,97,1584:0,97,255:40,0 chr1 90178268 . G . PASS END=90178560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,994:0,81,255:40,0 chr1 90178561 . T . PASS END=90178561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1312:0,70,255:37,0 chr1 90178562 . T . PASS END=90178674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1233:0,86,255:40,0 chr1 90178675 . C . PASS END=90178675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:33,0 chr1 90178676 . T . PASS END=90178700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1272:0,92,255:36,0 chr1 90178701 . A . PASS END=90178701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1185:0,55,255:29,0 chr1 90178702 . C . PASS END=90178705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:32,0 chr1 90178706 . A . PASS END=90178709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:32,0 chr1 90178710 . A . PASS END=90178710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1142:0,71,255:32,0 chr1 90178711 . C . PASS END=90178711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 90178712 . A . PASS END=90178712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr1 90178713 . G . PASS END=90178742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:34,0 chr1 90178743 . A G, 151.88 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,22,0:0,13,0:102:190,105,0,1327,105,1327:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,15:0,0,17,18 chr1 90178744 . C . PASS END=90178780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1100:0,91,255:36,0 chr1 90178781 . G . PASS END=90179289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:87:36:0,87,1265:0,87,255:40,0 chr1 90179290 . A . PASS END=90179290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:63:49:0,63,1338:0,63,255:40,0 chr1 90179291 . T . PASS END=90179317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,114,1706:0,114,255:40,0 chr1 90179318 . G . PASS END=90179318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1545:0,77,255:40,0 chr1 90179319 . A . PASS END=90179340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:44:0,84,1423:0,84,255:40,0 chr1 90179341 . C . PASS END=90179341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:38:45:0,38,1333:0,38,255:37,0 chr1 90179342 . T . PASS END=90179370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:36:0,93,1450:0,93,255:40,0 chr1 90179371 . G . PASS END=90179371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1091:0,74,255:33,0 chr1 90179372 . A . PASS END=90179374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1197:0,91,255:36,0 chr1 90179375 . C . PASS END=90179375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1078:0,58,255:33,0 chr1 90179376 . A . PASS END=90179380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1144:0,91,255:35,0 chr1 90179381 . C . PASS END=90179381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1197:0,69,255:34,0 chr1 90179382 . T . PASS END=90179390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,105,1575:0,111,255:36,0 chr1 90179391 . A . PASS END=90179391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1090:0,55,255:33,0 chr1 90179392 . T . PASS END=90179401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:36:0,80,1080:0,80,255:36,0 chr1 90179402 . C . PASS END=90179402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:35,0 chr1 90179403 . G . PASS END=90179409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,91,255:36,0 chr1 90179410 . A . PASS END=90179410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:28,0 chr1 90179411 . T . PASS END=90179417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,99,255:29,0 chr1 90179418 . T . PASS END=90179434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,74,255:25,0 chr1 90179435 . C . PASS END=90179443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 90179444 . A . PASS END=90179444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 90179445 . C . PASS END=90179469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 90179470 . A . PASS END=90179470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 90179471 . T . PASS END=90179494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:32,0 chr1 90179495 . A . PASS END=90179531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:32:0,83,1194:0,83,255:39,0 chr1 90179532 . A G, 49.95 PASS DP=43;MQ=250.00;MQRankSum=5.600;ReadPosRankSum=1.373;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,21,0:0.488,0.000:43:9,6,0:13,15,0:48:85,0,50,726,775,1501:255,0,255:20,0:4.9953e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,12,9:12,10,11,10 chr1 90179533 . T . PASS END=90179569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:38:0,89,1222:0,89,255:40,0 chr1 90179570 . A . PASS END=90179585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1305:0,97,255:34,0 chr1 90179586 . T . PASS END=90179586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1018:0,79,255:28,0 chr1 90179587 . C . PASS END=90179598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 90179599 . G . PASS END=90179599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:28,0 chr1 90179600 . G . PASS END=90179694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1140:0,85,255:38,0 chr1 90179695 . T . PASS END=90179695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 90179696 . G . PASS END=90179698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 90179699 . T . PASS END=90179699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1148:0,68,255:29,0 chr1 90179700 . C . PASS END=90179723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1210:0,86,255:33,0 chr1 90179724 . A . PASS END=90179724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1119:0,55,255:31,0 chr1 90179725 . T . PASS END=90179725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:33,0 chr1 90179726 . G . PASS END=90179727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 90179728 . C . PASS END=90179728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1163:0,55,255:30,0 chr1 90179729 . A . PASS END=90179757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1106:0,88,255:34,0 chr1 90179758 . C . PASS END=90179758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1137:0,47,255:30,0 chr1 90179759 . C . PASS END=90179760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 90179761 . T . PASS END=90179761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:31,0 chr1 90179762 . A . PASS END=90179780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1111:0,82,255:32,0 chr1 90179781 . G . PASS END=90179781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1041:0,66,255:29,0 chr1 90179782 . C . PASS END=90179805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1129:0,80,255:32,0 chr1 90179806 . A . PASS END=90179807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 90179808 . T . PASS END=90179846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1119:0,82,255:32,0 chr1 90179847 . A . PASS END=90179847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:31,0 chr1 90179848 . T . PASS END=90179868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1139:0,80,255:31,0 chr1 90179869 . G . PASS END=90179879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,89,255:26,0 chr1 90179880 . A . PASS END=90179885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 90179886 . A . PASS END=90179887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,970:0,60,255:29,0 chr1 90179888 . A . PASS END=90179890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 90179891 . A . PASS END=90179891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 90179892 . T . PASS END=90179893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 90179894 . A . PASS END=90179894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 90179895 . C . PASS END=90179906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 90179907 . A . PASS END=90179907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 90179908 . G . PASS END=90179967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1141:0,87,255:40,0 chr1 90179968 . C . PASS END=90179968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr1 90179969 . C . PASS END=90180066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1264:0,81,255:40,0 chr1 90180067 . T . PASS END=90180067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:37,0 chr1 90180068 . A . PASS END=90180316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,107,1620:0,107,255:40,0 chr1 90180317 . A . PASS END=90180317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:59:51:0,59,1646:0,59,255:40,0 chr1 90180318 . A . PASS END=90180451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,83,255:40,0 chr1 90180452 . C . PASS END=90180478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr1 90180479 . G . PASS END=90180510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 90180511 . T . PASS END=90180540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,459:0,36,255:13,0 chr1 90180541 . A . PASS END=90180541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 90309197 . G . PASS END=90309208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:29,0 chr1 90309209 . T . PASS END=90309217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:31:0,87,1305:0,93,255:34,0 chr1 90398628 . A . PASS END=90400142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:36:0,87,1305:0,87,255:40,0 chr1 90400143 . C . PASS END=90400143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 90400144 . C . PASS END=90400798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:34:0,81,1235:0,81,255:40,0 chr1 90400799 . A . PASS END=90400799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:71:57:0,71,1941:0,71,255:40,0 chr1 90400800 . G . PASS END=90401204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:42:0,87,1490:0,87,255:40,1 chr1 90460817 . A . PASS END=90460832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 90463669 . A . PASS END=90463713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,166,255:40,0 chr1 90470562 . G . PASS END=90470651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,179,255:40,0 chr1 90470692 . G . PASS END=90470780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1288:0,87,255:40,0 chr1 90470781 . A . PASS END=90470790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:76:30:0,76,1011:0,76,255:26,0 chr1 90470791 . G . PASS END=90470791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:25,0 chr1 90470792 . T . PASS END=90470807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:24,0 chr1 90472904 . G . PASS END=90472935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 90472936 . C . PASS END=90472942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:18,0 chr1 90472943 . G . PASS END=90472957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr1 90472958 . G . PASS END=90472965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 90472966 . C . PASS END=90472966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 90472967 . T . PASS END=90472974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 90472975 . G . PASS END=90472975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 90472976 . T . PASS END=90473093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1101:0,80,255:37,0 chr1 90473094 . G . PASS END=90473096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 90473097 . C . PASS END=90473105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,88,255:29,0 chr1 90473106 . C . PASS END=90473106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,915:0,54,255:26,0 chr1 90473107 . G . PASS END=90473121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,981:0,87,255:29,0 chr1 90473122 . C . PASS END=90473125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 90473126 . G . PASS END=90473127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 90473128 . T . PASS END=90473129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 90473130 . A . PASS END=90473137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 90473138 . C . PASS END=90473154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,955:0,67,255:26,0 chr1 90473155 . A . PASS END=90473156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 90473157 . T . PASS END=90473167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:26,0 chr1 90473168 . C . PASS END=90473168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 90473169 . A . PASS END=90473169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 90473170 . G . PASS END=90473177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 90473178 . T . PASS END=90473180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 90473181 . C . PASS END=90473181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 90473182 . C . PASS END=90473184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:25,0 chr1 90473185 . A . PASS END=90473285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,88,255:40,0 chr1 90473286 . A . PASS END=90473286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1014:0,71,255:31,0 chr1 90473287 . C . PASS END=90473306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:33,0 chr1 90473307 . G . PASS END=90473309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 90475647 . C . PASS END=90475845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:29:0,80,1028:0,80,255:40,0 chr1 90478685 . C . PASS END=90478796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,117,1755:0,147,255:40,1 chr1 90482876 . A . PASS END=90483023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,3:93:99:48:0,120,1800:0,144,255:40,0 chr1 90484244 . G . PASS END=90484343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:86:0,120,1800:0,218,255:40,0 chr1 90486351 . G . PASS END=90486374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:30:0,85,1050:0,85,255:39,0 chr1 90486375 . T . PASS END=90486411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,100,1336:0,100,255:40,0 chr1 90486412 . T G, 224.56 PASS DP=59;MQ=249.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,31,0:0,28,0:175:262,178,0,2248,178,2248:255,178,0:0,0:2.2456e+02,1.7456e+02,0.0000e+00,4.5000e+02,2.0933e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,26:0,0,31,28 chr1 90486413 . T . PASS END=90486449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,102,1559:0,102,255:40,0 chr1 90486450 . T . PASS END=90486481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1269:0,99,255:40,0 chr1 90487809 . G . PASS END=90487904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:60:0,120,1800:0,167,255:40,0 chr1 90492913 . G . PASS END=90492967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,946:0,83,255:40,0 chr1 90492968 . A . PASS END=90492968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:57:56:0,57,1635:0,57,255:40,0 chr1 90492969 . T . PASS END=90492988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:82:56:0,82,1800:0,82,255:40,0 chr1 90492989 . T . PASS END=90493025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,115,1775:0,115,255:40,0 chr1 90493026 . G A, 196.98 PASS DP=50;MQ=248.57;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,34,0:0,16,0:147:235,150,0,1815,150,1815:255,168,0:0,0:1.9698e+02,1.4698e+02,0.0000e+00,4.5000e+02,1.8175e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,30:0,0,24,26 chr1 90493027 . G . PASS END=90493063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:81:52:0,81,1549:0,81,255:40,0 chr1 90493064 . T . PASS END=90493118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:85:41:0,85,1251:0,85,255:40,0 chr1 90493119 . G . PASS END=90493119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1402:0,68,255:36,0 chr1 90493120 . G . PASS END=90493141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1266:0,81,255:37,0 chr1 90493142 . T . PASS END=90493142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1152:0,63,255:31,0 chr1 90493143 . A . PASS END=90493147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1211:0,91,255:33,0 chr1 90493148 . T . PASS END=90493148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:32,0 chr1 90493149 . A . PASS END=90493152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1233:0,89,255:33,0 chr1 90493153 . G . PASS END=90493153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:31,0 chr1 90493154 . G . PASS END=90493209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1069:0,82,255:36,0 chr1 90493210 . G . PASS END=90493210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:28,0 chr1 90493211 . C . PASS END=90493233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr1 90493234 . C . PASS END=90493241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1047:0,74,255:26,0 chr1 90493242 . G . PASS END=90493253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 90493254 . A . PASS END=90493260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 91177869 . T . PASS END=91177871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 91177872 . C . PASS END=91177873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 91177874 . G . PASS END=91177891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 91177892 . G . PASS END=91177892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 91177893 . G . PASS END=91177896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 91177897 . G . PASS END=91177933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr1 91177934 . G . PASS END=91177955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 91177956 . A . PASS END=91177956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 91177957 . C . PASS END=91177964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:16,0 chr1 91177965 . C . PASS END=91177966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 91177967 . G . PASS END=91177990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:17,0 chr1 91177991 . G . PASS END=91177991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 91177992 . T . PASS END=91177992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 91177993 . G . PASS END=91177993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 91177994 . C . PASS END=91177999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 91178000 . G . PASS END=91178001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 91178002 . G . PASS END=91178011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 91178012 . T . PASS END=91178033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 91178034 . A . PASS END=91178038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,447:0,3,255:12,1 chr1 91178039 . C . PASS END=91178049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 91178050 . G . PASS END=91178061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 91178062 . C . PASS END=91178062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 91178063 . T . PASS END=91178067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 91178068 . A . PASS END=91178071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 91178072 . G . PASS END=91178115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,613:0,48,255:17,0 chr1 91178116 . G . PASS END=91178124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 91178125 . T . PASS END=91178139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 91178140 . A . PASS END=91178169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr1 91178170 . T . PASS END=91178181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 91180088 . C . PASS END=91180103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,552:0,48,255:18,0 chr1 91180104 . A . PASS END=91180104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 91180105 . G . PASS END=91180105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 91180106 . G . PASS END=91180106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 91180107 . T . PASS END=91180124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 91180125 . T . PASS END=91180125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 91180126 . G . PASS END=91180126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 91180127 . A . PASS END=91180127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 91180128 . G . PASS END=91180128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 91180129 . G . PASS END=91180135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 91180136 . G . PASS END=91180136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,806:0,25,255:21,0 chr1 91180137 . C . PASS END=91180160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:26,0 chr1 91180161 . G . PASS END=91180161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:25,0 chr1 91180162 . C . PASS END=91180167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,1008:0,78,255:26,0 chr1 91180168 . C . PASS END=91180169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 91180170 . G . PASS END=91180170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 91180171 . G . PASS END=91180288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1155:0,80,255:37,0 chr1 91180289 . T . PASS END=91180289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 91180290 . C . PASS END=91180292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 91180293 . G . PASS END=91180293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 91180294 . G . PASS END=91180294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 91180295 . T . PASS END=91180311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 91180312 . C . PASS END=91180313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 91182128 . C . PASS END=91182154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,770:0,63,255:26,0 chr1 91182155 . C . PASS END=91182171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr1 91182172 . T . PASS END=91182188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 91182189 . C . PASS END=91182192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 91182193 . T . PASS END=91182196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 91182197 . G . PASS END=91182197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 91182198 . C . PASS END=91182225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 91182226 . T . PASS END=91182226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 91182227 . T . PASS END=91182254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 91182255 . A . PASS END=91182265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr1 91182266 . T . PASS END=91182269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 91182270 . G . PASS END=91182274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:16,0 chr1 91182275 . A . PASS END=91182277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:19:0,39,585:0,57,255:13,0 chr1 91182278 . G . PASS END=91182278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 91182279 . T . PASS END=91182279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:13,0 chr1 91182280 . G . PASS END=91182289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:14,0 chr1 91182290 . C . PASS END=91182290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 91182291 . C . PASS END=91182294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 91182295 . G . PASS END=91182302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 91182303 . G . PASS END=91182312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 91182313 . A . PASS END=91182313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 91182314 . T . PASS END=91182316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 91182317 . C . PASS END=91182317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 91182318 . C . PASS END=91182335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 91182336 . C . PASS END=91182336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 91182337 . G . PASS END=91182340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 91182341 . A . PASS END=91182341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 91182342 . A . PASS END=91182345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 91182346 . C . PASS END=91182346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 91182347 . T . PASS END=91182352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 91182353 . C . PASS END=91182353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 91182354 . C . PASS END=91182354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 91182355 . G . PASS END=91182355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 91182356 . A . PASS END=91182360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 91182361 . G . PASS END=91182361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 91182362 . C . PASS END=91182362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 91182363 . C . PASS END=91182366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 91182367 . C . PASS END=91182367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 91182368 . C . PASS END=91182370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 91182371 . G . PASS END=91182374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 91182375 . C . PASS END=91182375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 91182376 . T . PASS END=91182377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 91182378 . G . PASS END=91182380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 91182381 . G . PASS END=91182387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 91182388 . G . PASS END=91182388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 91182389 . G . PASS END=91182391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 91182392 . G . PASS END=91182392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 91182393 . C . PASS END=91182394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 91182395 . G . PASS END=91182395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 91182396 . C . PASS END=91182397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 91182398 . G . PASS END=91182398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 91182399 . C . PASS END=91182399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 91182400 . T . PASS END=91182402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 91182403 . G . PASS END=91182404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 91182405 . C . PASS END=91182408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr1 91182409 . A . PASS END=91182410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 91182411 . C . PASS END=91182415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 91182416 . G . PASS END=91182416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 91182417 . C . PASS END=91182425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 91182426 . G . PASS END=91182426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 91182427 . G . PASS END=91182432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 91182433 . G . PASS END=91182433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 91182434 . G . PASS END=91182440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,544:0,48,255:17,0 chr1 91182441 . A . PASS END=91182441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,497:0,12,255:16,0 chr1 91182442 . C . PASS END=91182444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 91182445 . T . PASS END=91182445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 91182446 . G . PASS END=91182473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,631:0,41,255:19,0 chr1 91182474 . C . PASS END=91182474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 91182475 . T . PASS END=91182483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 91182484 . T . PASS END=91182490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 91182491 . G . PASS END=91182491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 91182492 . G . PASS END=91182493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 91182494 . G . PASS END=91182494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 91182495 . G . PASS END=91182495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 91182496 . T . PASS END=91182496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 91182497 . G . PASS END=91182499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:23,0 chr1 91182500 . G . PASS END=91182500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 91182501 . A . PASS END=91182503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 91182504 . C . PASS END=91182504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 91182505 . T . PASS END=91182518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 91182519 . T . PASS END=91182520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:20,0 chr1 91182521 . C . PASS END=91182529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 91182530 . G . PASS END=91182530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 91182531 . C . PASS END=91182531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 91182532 . T . PASS END=91182532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 91182533 . C . PASS END=91182543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 91182544 . A . PASS END=91182544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 91182545 . T . PASS END=91182547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 91182548 . T . PASS END=91182548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 91182549 . G . PASS END=91182551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 91182552 . T . PASS END=91182554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,814:0,53,255:19,0 chr1 91182555 . G . PASS END=91182555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 91182556 . A . PASS END=91182556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:20,0 chr1 91182557 . T . PASS END=91182574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,801:0,69,255:23,0 chr1 91182575 . T . PASS END=91182575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr1 91182576 . C . PASS END=91182583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 91182584 . T . PASS END=91182584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 91182585 . A . PASS END=91182601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,833:0,72,255:25,0 chr1 91182602 . G . PASS END=91182604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 91182605 . A . PASS END=91182607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 91182608 . G . PASS END=91182631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1133:0,84,255:30,0 chr1 91182632 . C . PASS END=91182632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 91182633 . G . PASS END=91182678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1113:0,85,255:35,0 chr1 91182679 . G . PASS END=91182679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:30,0 chr1 91182680 . G . PASS END=91182738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1150:0,83,255:34,0 chr1 91182739 . C . PASS END=91182752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,74,255:26,0 chr1 91381763 . C . PASS END=91381763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,2:92:99:92:0,120,1800:0,244,255:40,0 chr1 91382355 . C . PASS END=91382475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:35:0,83,1260:0,83,255:40,0 chr1 91382476 . A . PASS END=91382477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,99,255:26,0 chr1 91382478 . A . PASS END=91382481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 91382482 . C . PASS END=91382500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,71,255:26,0 chr1 91382501 . A . PASS END=91382501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 91382502 . G . PASS END=91382502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 91382503 . T . PASS END=91382503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 91382504 . C . PASS END=91382511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 91382512 . A . PASS END=91382517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 91382518 . A . PASS END=91382519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 91382520 . G . PASS END=91382542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,598:0,48,255:19,0 chr1 91382543 . A . PASS END=91382543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 91382544 . A . PASS END=91382547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 91383609 . C . PASS END=91383711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,101,1380:0,101,255:40,0 chr1 91400965 . C . PASS END=91401075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1260:0,96,255:40,0 chr1 91401076 . T . PASS END=91401076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 91401077 . C . PASS END=91401078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 91401079 . C . PASS END=91401087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:25,0 chr1 91403042 . C . PASS END=91403061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,99,1465:0,104,255:37,0 chr1 91403062 . A . PASS END=91403062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,2 chr1 91403063 . T . PASS END=91403063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:47:39:0,47,1221:0,47,255:37,2 chr1 91403064 . T . PASS END=91403064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1310:0,67,255:37,0 chr1 91403065 . T . PASS END=91403639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:38:0,90,1435:0,90,255:40,2 chr1 91403640 . C . PASS END=91403640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1432:0,77,255:30,0 chr1 91403641 . T . PASS END=91403647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,103,255:33,0 chr1 91403829 . C . PASS END=91403833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 91403834 . C . PASS END=91403834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 91403835 . T . PASS END=91403837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 91403838 . C . PASS END=91403838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 91403839 . T . PASS END=91403839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 91403840 . C . PASS END=91404135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1193:0,80,255:40,0 chr1 91404136 . T . PASS END=91404136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1348:0,76,255:34,0 chr1 91404137 . C . PASS END=91405266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:38:0,81,1485:0,81,255:40,2 chr1 91405267 . A . PASS END=91405267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:76:48:0,76,1588:0,76,255:38,1 chr1 91405268 . T . PASS END=91406412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:35:0,81,1215:0,86,255:40,1 chr1 91406413 . T . PASS END=91406413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:25,0 chr1 91406414 . G . PASS END=91406866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:38:0,84,1324:0,84,255:40,0 chr1 91447867 . C . PASS END=91447910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:96:0,120,1800:0,255,255:40,0 chr1 91726847 . T . PASS END=91726916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,161,255:40,0 chr1 91727794 . T . PASS END=91727949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:50:0,112,1772:0,112,255:40,0 chr1 91728038 . A . PASS END=91728052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,160,255:40,0 chr1 91728053 . G A, 227.57 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,32,0:0,28,0:178:265,181,0,2294,181,2294:255,180,0:0,0:2.2757e+02,1.7757e+02,0.0000e+00,4.5000e+02,2.1234e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,38:0,0,26,34 chr1 91728054 . G . PASS END=91728090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,176,255:40,0 chr1 91728091 . A . PASS END=91728149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,120,1800:0,129,255:40,0 chr1 91731574 . C . PASS END=91731664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,144,255:40,0 chr1 91733302 . C . PASS END=91733412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:54:0,120,1800:0,138,255:40,0 chr1 91739269 . C . PASS END=91739372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:50:0,120,1800:0,124,255:40,0 chr1 91740287 . C . PASS END=91740366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:71:0,120,1800:0,193,255:40,0 chr1 91742185 . C . PASS END=91742300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:59:0,120,1800:0,157,255:40,0 chr1 91742539 . A . PASS END=91742619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:53:0,120,1800:0,138,255:40,0 chr1 91778906 . C . PASS END=91779052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:41:0,111,1665:0,123,255:40,0 chr1 91779514 . C . PASS END=91779617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:64:0,120,1800:0,176,255:40,0 chr1 91781372 . G . PASS END=91781375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,156,255:40,0 chr1 91781376 . T . PASS END=91781412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:73:0,120,1800:0,150,255:40,0 chr1 91781413 . T G, 317.87 PASS DP=90;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,90,0:1.000,0.000:90:0,51,0:0,39,0:268:356,271,0,3466,271,3466:255,255,0:0,0:3.1787e+02,2.6787e+02,0.0000e+00,4.4853e+02,3.0264e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,49,41:0,0,46,44 chr1 91781414 . A . PASS END=91781450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:89:0,120,1800:0,255,255:40,0 chr1 91781451 . T . PASS END=91781529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:80:0,120,1800:0,240,255:40,0 chr1 91781658 . C . PASS END=91781741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:85:0,120,1800:0,239,255:40,0 chr1 91781948 . C . PASS END=91782033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:98:0,120,1800:0,255,255:40,0 chr1 91784635 . C . PASS END=91784766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:64:0,120,1800:0,175,255:40,0 chr1 91784850 . A . PASS END=91784947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:63:0,120,1800:0,170,255:40,2 chr1 91788507 . C . PASS END=91788554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,193,255:40,0 chr1 91788650 . C . PASS END=91788756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:42:0,84,1260:0,102,255:40,0 chr1 91790232 . C . PASS END=91790323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:74:0,120,1800:0,171,255:40,0 chr1 91803146 . T . PASS END=91803155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 91803156 . G . PASS END=91803156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 91803157 . T . PASS END=91803163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:26,0 chr1 91803164 . T . PASS END=91803164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr1 91803165 . A . PASS END=91803173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,873:0,61,255:26,0 chr1 91803174 . C . PASS END=91803176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 91803177 . T . PASS END=91803177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 91803178 . T . PASS END=91803183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 91803184 . G . PASS END=91803187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 91803188 . G . PASS END=91803193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 91803194 . A . PASS END=91803194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 91803195 . G . PASS END=91803197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 91803198 . A . PASS END=91803198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 91803199 . A . PASS END=91803209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 91803210 . G . PASS END=91803219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:27:0,60,900:0,68,255:22,0 chr1 91803220 . C . PASS END=91803237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,631:0,54,255:19,0 chr1 91808987 . C . PASS END=91809067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:50:0,120,1800:0,143,255:40,0 chr1 91812986 . C . PASS END=91813033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:95:0,120,1800:0,226,255:40,0 chr1 91816295 . C . PASS END=91816428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:49:0,116,1755:0,116,255:40,0 chr1 91817106 . C . PASS END=91817200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:37:0,100,1620:0,100,255:40,0 chr1 91818063 . T . PASS END=91818208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:96:42:0,96,1440:0,99,255:40,0 chr1 91818608 . A . PASS END=91818709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:64:0,120,1800:0,176,255:40,0 chr1 91818813 . C . PASS END=91818856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:70:0,120,1800:0,194,255:40,0 chr1 91840462 . T . PASS END=91840475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,209,255:40,0 chr1 91840915 . C . PASS END=91841003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,167,255:40,0 chr1 91841084 . C . PASS END=91841263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:40:0,90,1350:0,120,255:40,0 chr1 91841264 . A . PASS END=91841270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1305:0,84,255:33,0 chr1 91841271 . A . PASS END=91841271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:32,0 chr1 91841272 . G . PASS END=91841284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1249:0,89,255:35,0 chr1 91843582 . A . PASS END=91843740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:92:42:0,92,1440:0,92,255:40,0 chr1 91843960 . C . PASS END=91844037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,4:76:99:59:0,120,1800:0,148,255:40,0 chr1 91844620 . T . PASS END=91844771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:51:0,120,1800:0,140,255:40,0 chr1 91845661 . T . PASS END=91845793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:83:44:0,83,1582:0,83,255:40,0 chr1 91846469 . A . PASS END=91846539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:53:0,120,1800:0,153,255:40,0 chr1 91850744 . G . PASS END=91850791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:80:0,120,1800:0,224,255:40,0 chr1 91851132 . C . PASS END=91851132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1313:0,108,255:36,0 chr1 91851133 . T . PASS END=91851133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1193:0,75,255:34,0 chr1 91851134 . T . PASS END=91851215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:86:36:0,86,1268:0,86,255:40,0 chr1 91851216 . T . PASS END=91851252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:76:0,120,1800:0,195,255:40,0 chr1 91851253 . T C, 287.32 PASS DP=80;MQ=249.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,80,0:1.000,0.000:80:0,35,0:0,45,0:237:325,240,0,3072,240,3072:255,241,0:0,0:2.8732e+02,2.3732e+02,0.0000e+00,4.5000e+02,2.7209e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,45:0,0,44,36 chr1 91851254 . T . PASS END=91851290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:80:0,120,1800:0,230,255:40,0 chr1 91851291 . T . PASS END=91851374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:81:36:0,81,1215:0,104,255:40,0 chr1 91851375 . C . PASS END=91851375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:27,0 chr1 91851376 . A . PASS END=91851376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:26,0 chr1 91851377 . G . PASS END=91851391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr1 91859650 . C . PASS END=91859757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:86:37:0,86,1321:0,86,255:40,0 chr1 91859758 . T . PASS END=91859794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,156,255:40,0 chr1 91859795 . T C, 236.14 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,38,0:0,25,0:186:274,189,0,2388,189,2388:255,192,0:0,0:2.3614e+02,1.8614e+02,0.0000e+00,4.5000e+02,2.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,23:0,0,29,34 chr1 91859796 . A . PASS END=91859832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:61:0,120,1800:0,176,255:40,0 chr1 91859833 . A . PASS END=91859959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,140,255:40,0 chr1 91861850 . C . PASS END=91861962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:56:0,120,1800:0,138,255:40,0 chr1 91866569 . T . PASS END=91866639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:89:0,120,1800:0,233,255:40,0 chr1 91967274 . A . PASS END=91967355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:44:0,116,1800:0,116,255:40,0 chr1 91967356 . T . PASS END=91967356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:16:44:0,16,1451:0,16,255:40,3 chr1 91967357 . A . PASS END=91967357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1543:0,55,255:40,0 chr1 91967358 . A . PASS END=91967388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,119,1607:0,119,255:40,0 chr1 91973411 . G . PASS END=91973494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:42:0,92,1520:0,92,255:40,0 chr1 91973819 . G . PASS END=91973954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:96:33:0,96,1426:0,98,255:40,0 chr1 91977154 . G . PASS END=91977242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:62:0,120,1800:0,180,255:40,0 chr1 91977243 . T . PASS END=91977243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,8:65:46:65:0,46,1424:0,46,255:40,0 chr1 91977244 . T . PASS END=91977247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:88:63:0,88,1469:0,88,255:40,0 chr1 91977338 . G . PASS END=91977480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:95:55:0,95,1800:0,95,255:40,0 chr1 91978615 . G . PASS END=91978826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:31:0,81,1215:0,93,255:40,0 chr1 91978827 . A . PASS END=91978843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,909:0,67,255:26,0 chr1 91978844 . A . PASS END=91978848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 91978849 . A . PASS END=91978850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 91978851 . G . PASS END=91978856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 91978857 . A . PASS END=91978858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,976:0,70,255:24,0 chr1 91978859 . G . PASS END=91978859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,840:0,51,255:22,0 chr1 91978860 . G . PASS END=91978864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:24,0 chr1 91979505 . G . PASS END=91979600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:49:0,86,1750:0,86,255:40,0 chr1 91980376 . C . PASS END=91980377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 91980378 . C . PASS END=91980409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1008:0,81,255:40,0 chr1 91980410 . C . PASS END=91980446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:94:46:0,94,1659:0,94,255:40,0 chr1 91980447 . A G, 187.53 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,26,0:0,21,0:138:225,141,0,1755,141,1755:255,141,0:0,0:1.8753e+02,1.3753e+02,0.0000e+00,4.5000e+02,1.7230e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,25:0,0,17,30 chr1 91980448 . A . PASS END=91980484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:47:0,120,1800:0,130,255:40,0 chr1 91980485 . G . PASS END=91980554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:36:0,84,1350:0,84,255:40,0 chr1 91981351 . G . PASS END=91981433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:34:0,89,1286:0,89,255:40,0 chr1 91985687 . C . PASS END=91985688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,862:0,61,255:25,0 chr1 91985689 . A . PASS END=91985836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:32:0,90,1188:0,96,255:40,0 chr1 91989598 . G . PASS END=91989598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 91989599 . G . PASS END=91989601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1125:0,77,255:26,0 chr1 91989602 . A . PASS END=91989603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:26,0 chr1 91989604 . C . PASS END=91989605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 91989606 . A . PASS END=91989609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:28,0 chr1 91989610 . T . PASS END=91989610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 91989611 . A . PASS END=91989621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1089:0,93,255:31,0 chr1 91989622 . A . PASS END=91989622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 91989623 . A . PASS END=91989992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:31:0,93,1194:0,93,255:40,0 chr1 92149296 . C . PASS END=92149299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 92149300 . G . PASS END=92149315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:23,0 chr1 92149316 . A . PASS END=92149316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 92149317 . G . PASS END=92149328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,853:0,69,255:26,0 chr1 92149329 . C . PASS END=92149336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 92149337 . T . PASS END=92149337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 92149338 . G . PASS END=92149352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1055:0,84,255:32,0 chr1 92149353 . A . PASS END=92149353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:31,0 chr1 92149354 . G . PASS END=92149393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:32,0 chr1 92149394 . G . PASS END=92149414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,826:0,62,255:25,0 chr1 92155337 . T . PASS END=92155337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 92161229 . C . PASS END=92161232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 92161233 . G . PASS END=92161235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 92161236 . A . PASS END=92161240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 92161241 . A . PASS END=92161241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:27,0 chr1 92161242 . G . PASS END=92161304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1163:0,80,255:40,0 chr1 92161305 . C . PASS END=92161306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1437:0,74,255:34,0 chr1 92161307 . C . PASS END=92161329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1011:0,80,255:34,0 chr1 92161330 . A . PASS END=92161330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 92161331 . A . PASS END=92161331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 92161332 . A . PASS END=92161332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 92161333 . A . PASS END=92161334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 92161335 . T . PASS END=92161336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 92163646 . G . PASS END=92163687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,150,255:40,0 chr1 92174220 . C . PASS END=92174222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,130,255:40,0 chr1 92174223 . T . PASS END=92174259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,109,1800:0,109,255:40,0 chr1 92174260 . A G, 50.00 PASS DP=61;MQ=249.93;MQRankSum=5.894;ReadPosRankSum=2.222;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,45,0:0.738,0.000:61:7,23,0:9,22,0:32:85,0,30,1601,572,2174:255,0,255:16,0:5.0002e+01,2.4544e-03,3.2557e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,5,27,18:6,10,25,20 chr1 92174261 . G . PASS END=92174297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,150,255:40,0 chr1 92174298 . T . PASS END=92174340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:42:0,96,1440:0,125,255:40,0 chr1 92177800 . C . PASS END=92177802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 92177803 . A . PASS END=92177803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 92177804 . G . PASS END=92177806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 92177807 . A . PASS END=92177807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 92177808 . A . PASS END=92177818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:23,0 chr1 92177819 . T . PASS END=92177819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 92177820 . G . PASS END=92177820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 92177821 . C . PASS END=92177821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 92177822 . T . PASS END=92177827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 92177828 . A . PASS END=92177828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 92177829 . T . PASS END=92177829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 92177830 . C . PASS END=92177839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1139:0,80,255:32,0 chr1 92177840 . A . PASS END=92177840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:31,0 chr1 92177841 . G . PASS END=92178082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1234:0,84,255:40,0 chr1 92178083 . G . PASS END=92178099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 92181793 . C . PASS END=92181800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:18,0 chr1 92181801 . A . PASS END=92181801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr1 92181802 . A . PASS END=92181818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,569:0,54,255:18,0 chr1 92181819 . G . PASS END=92181825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 92181826 . G . PASS END=92181826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:22,0 chr1 92181827 . A . PASS END=92181852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,734:0,64,255:25,0 chr1 92181853 . G . PASS END=92181853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 92181854 . A . PASS END=92181855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 92181856 . G . PASS END=92181857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 92181858 . C . PASS END=92181859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 92181860 . G . PASS END=92181865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1218:0,86,255:34,0 chr1 92181866 . T . PASS END=92181866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1286:0,59,255:32,0 chr1 92181867 . A . PASS END=92181951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1267:0,95,255:37,0 chr1 92182125 . C . PASS END=92182240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1215:0,88,255:40,0 chr1 92182241 . C . PASS END=92182250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,84,255:26,0 chr1 92182251 . A . PASS END=92182265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:16:0,45,675:0,48,255:17,0 chr1 92184869 . G . PASS END=92185021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:28:0,84,1070:0,84,255:40,0 chr1 92185450 . C . PASS END=92185619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:39:0,84,1258:0,84,255:40,0 chr1 92185620 . C . PASS END=92185649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:38:0,85,1380:0,85,255:40,0 chr1 92185650 . A . PASS END=92185650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:31,0 chr1 92185651 . A . PASS END=92185656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1381:0,84,255:34,0 chr1 92185657 . C T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.069;ReadPosRankSum=2.285;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,24,0:0.632,0.000:38:5,13,0:9,11,0:45:85,0,44,850,472,1322:255,0,255:14,0:5.0000e+01,1.3176e-04,4.6920e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,10,14:7,7,15,9 chr1 92185658 . G . PASS END=92185681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,93,255:34,0 chr1 92185682 . C . PASS END=92185684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 92185685 . C . PASS END=92185694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1208:0,83,255:29,0 chr1 92185695 . G . PASS END=92185696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 92185697 . G . PASS END=92185697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 92185698 . G . PASS END=92185702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 92185703 . T . PASS END=92185707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 92185708 . G . PASS END=92185712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 92185713 . G . PASS END=92185753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,953:0,62,255:26,0 chr1 92185754 . A . PASS END=92185785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 92185786 . T . PASS END=92185786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 92185787 . G . PASS END=92185787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 92187512 . C . PASS END=92187687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:38:0,90,1321:0,96,255:40,0 chr1 92187688 . A . PASS END=92187688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 92187689 . T . PASS END=92187689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 92187690 . A . PASS END=92187697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:25,0 chr1 92187698 . G . PASS END=92187698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:23,0 chr1 92187699 . A . PASS END=92187701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,68,255:21,0 chr1 92193216 . A . PASS END=92193363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:93:35:0,93,1301:0,95,255:40,0 chr1 92195362 . C . PASS END=92195524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1215:0,87,255:40,0 chr1 92195525 . C . PASS END=92195530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 92200333 . C . PASS END=92200503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:37:0,87,1305:0,109,255:40,0 chr1 92200504 . A . PASS END=92200516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,77,255:24,0 chr1 92224170 . C . PASS END=92224178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1285:0,97,255:40,0 chr1 92224179 . T . PASS END=92224179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1372:0,79,255:39,0 chr1 92224180 . C . PASS END=92224307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:41:0,93,1395:0,123,255:40,0 chr1 92251761 . T . PASS END=92251784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1551:0,113,255:40,0 chr1 92262844 . C . PASS END=92262847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 92262848 . C . PASS END=92262869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 92262870 . G . PASS END=92262873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:17,0 chr1 92262874 . T C, 97.70 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,9,0:0,8,0:48:135,51,0,625,51,625:255,51,0:0,0:9.7705e+01,4.7705e+01,7.3776e-05,4.5000e+02,8.2475e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,8:0,0,7,10 chr1 92262875 . G . PASS END=92262877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 92262878 . G . PASS END=92262911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,726:0,60,255:26,0 chr1 92262912 . G . PASS END=92262914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 92262915 . C . PASS END=92262931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 92262932 . G . PASS END=92262934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 92262935 . C . PASS END=92262940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 92262941 . G . PASS END=92262941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 92262942 . A . PASS END=92262949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1155:0,90,255:30,0 chr1 92262950 . G . PASS END=92262950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 92262951 . T . PASS END=92262956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr1 92262957 . T . PASS END=92262957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 92262958 . C . PASS END=92262974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 92262975 . C . PASS END=92262976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 92262977 . G . PASS END=92262993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,980:0,84,255:28,0 chr1 92262994 . A . PASS END=92262994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 92262995 . G . PASS END=92262997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 92262998 . G . PASS END=92263009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:23,0 chr1 92263010 . A . PASS END=92263017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:19,0 chr1 92263018 . A . PASS END=92263028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:17:0,36,540:0,47,255:13,0 chr1 92327028 . C . PASS END=92327088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,142,255:40,0 chr1 92428312 . A . PASS END=92428457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:45:0,104,1570:0,104,255:40,0 chr1 92428458 . A . PASS END=92428484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:36:0,84,1260:0,101,255:40,0 chr1 92428485 . T . PASS END=92428485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:28,0 chr1 92428486 . G . PASS END=92428489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:29,0 chr1 92428490 . A . PASS END=92428494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr1 92428495 . C A, 136.82 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,11,0:0,19,0:87:175,90,0,1119,90,1126:255,74,0:0,0:1.3682e+02,8.6818e+01,0.0000e+00,4.5000e+02,1.2159e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,23:0,0,12,18 chr1 92428496 . A . PASS END=92428497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 92428498 . T . PASS END=92428501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 92428502 . C . PASS END=92428503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1053:0,71,255:24,0 chr1 92430184 . G . PASS END=92430321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:63:0,120,1800:0,157,255:40,0 chr1 92433703 . C . PASS END=92433829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:42:0,101,1474:0,101,255:40,0 chr1 92441823 . G . PASS END=92441974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:36:0,90,1350:0,95,255:40,0 chr1 92441975 . A . PASS END=92441978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,107,255:26,0 chr1 92441979 . C . PASS END=92441982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 92441983 . A . PASS END=92441991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:22,0 chr1 92441992 . C . PASS END=92441995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:25:0,57,855:0,59,255:19,0 chr1 92442600 . G . PASS END=92442914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:36:0,93,1304:0,94,255:40,0 chr1 92442915 . G . PASS END=92442915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:32,0 chr1 92442916 . T . PASS END=92442933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1194:0,86,255:34,0 chr1 92442934 . A . PASS END=92442934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1133:0,44,255:29,0 chr1 92442935 . T . PASS END=92442942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:31,0 chr1 92442943 . C . PASS END=92442950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,74,255:26,0 chr1 92443725 . G . PASS END=92443853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:50:0,120,1800:0,150,255:40,0 chr1 92445126 . G . PASS END=92445142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,695:0,63,255:23,0 chr1 92445143 . T . PASS END=92445143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 92445144 . T . PASS END=92445151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,992:0,72,255:26,0 chr1 92445152 . G . PASS END=92445279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1017:0,84,255:40,0 chr1 92445280 . A . PASS END=92445280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1056:0,62,255:28,0 chr1 92445281 . G . PASS END=92445284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 92445285 . G . PASS END=92445305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,906:0,62,255:26,0 chr1 92445306 . C . PASS END=92445314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:19,0 chr1 92446200 . C . PASS END=92446360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,1:109:95:42:0,95,1535:0,95,255:40,0 chr1 92446361 . G . PASS END=92446372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:81:0,120,1800:0,210,255:40,0 chr1 92446446 . T . PASS END=92446735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:51:0,104,1800:0,104,255:40,0 chr1 92446825 . C . PASS END=92446938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:92:0,120,1800:0,227,255:40,0 chr1 92447175 . C . PASS END=92447187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:31,0 chr1 92447188 . A . PASS END=92447190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 92447191 . A . PASS END=92447226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1350:0,105,255:40,0 chr1 92447227 . G . PASS END=92447227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:19:45:0,19,1451:0,19,255:37,4 chr1 92447228 . A . LowGQ END=92447230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:0:46:0,0,1360:1,0,255:37,4 chr1 92447231 . A . PASS END=92447231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:19:45:0,19,1459:0,19,255:40,0 chr1 92447232 . G . PASS END=92447293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1260:0,102,255:40,0 chr1 92447294 . A . PASS END=92447312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 92456741 . A . PASS END=92456802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:93:0,120,1800:0,229,255:40,0 chr1 92457821 . A . PASS END=92457839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1172:0,85,255:36,0 chr1 92457840 . T . PASS END=92457840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1312:0,70,255:35,0 chr1 92457841 . A . PASS END=92457842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1388:0,98,255:36,0 chr1 92457843 . C T, 161.37 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,19,0:0,19,0:111:199,114,0,1466,114,1466:255,114,0:0,0:1.6137e+02,1.1137e+02,0.0000e+00,4.5000e+02,1.4614e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,14:0,0,19,19 chr1 92457844 . G . PASS END=92457854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:40,0 chr1 92457855 . G . PASS END=92457855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1396:0,76,255:39,0 chr1 92457856 . A . PASS END=92457863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 92457864 . T . PASS END=92457864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1413:0,79,255:38,0 chr1 92457865 . C . PASS END=92457871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:40,0 chr1 92459640 . A . PASS END=92459811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:28:0,84,1070:0,84,255:40,0 chr1 92467606 . G . PASS END=92467607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 92467608 . G . PASS END=92467706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:28:0,84,1019:0,84,255:40,0 chr1 92469971 . G . PASS END=92470176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,110,1489:0,110,255:40,0 chr1 92470676 . G . PASS END=92470856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:89:40:0,89,1421:0,89,255:40,0 chr1 92479763 . A . PASS END=92479831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:62:0,120,1800:0,170,255:40,0 chr1 92495637 . A . PASS END=92495637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 92495638 . T . PASS END=92495645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr1 92495646 . C . PASS END=92495651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 92495652 . G . PASS END=92495652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 92495653 . A . PASS END=92495654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 92495655 . T . PASS END=92495682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:19,0 chr1 92495683 . G . PASS END=92495693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 92495694 . T . PASS END=92495694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 92495695 . T . PASS END=92495698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 92495699 . G . PASS END=92495699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 92495700 . T . PASS END=92495774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,853:0,61,255:26,0 chr1 92495775 . C . PASS END=92495775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:23,0 chr1 92495776 . C . PASS END=92495815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:25,0 chr1 92495816 . C . PASS END=92495819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr1 92495820 . T . PASS END=92495821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 92495822 . C . PASS END=92495822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 92495823 . C . PASS END=92495826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 92495827 . G . PASS END=92495827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 92495828 . C . PASS END=92495830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 92495831 . C . PASS END=92495847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,50,255:19,0 chr1 92495848 . A . PASS END=92495848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 92495849 . C . PASS END=92495858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 92495859 . C . PASS END=92495867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 92498062 . G . PASS END=92498147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,138,255:40,0 chr1 92508380 . G . PASS END=92508537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,99,1485:0,106,255:40,0 chr1 92511089 . G . PASS END=92511217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:48:0,120,1800:0,144,255:40,0 chr1 92515874 . A . PASS END=92515977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,167,255:40,0 chr1 92518067 . G . PASS END=92518215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:45:0,119,1659:0,119,255:40,0 chr1 92528612 . C . PASS END=92528613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:26,0 chr1 92528614 . G . PASS END=92528615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 92528616 . C . PASS END=92528627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 92528628 . C . PASS END=92528788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1116:0,85,255:40,1 chr1 92528789 . A . PASS END=92528806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 92528807 . G . PASS END=92528812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 92528813 . T . PASS END=92528816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 92528817 . A . PASS END=92528843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 92540090 . T . PASS END=92540091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1344:0,93,255:40,0 chr1 92540092 . A . PASS END=92540092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:14:42:0,14,1002:0,14,255:37,0 chr1 92540093 . G . PASS END=92540097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:43:0,95,1213:0,95,255:40,0 chr1 92540098 . C . PASS END=92540098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1382:0,60,255:39,0 chr1 92540099 . T . PASS END=92540100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,131,255:40,0 chr1 92540101 . C . PASS END=92540101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:51:45:0,51,1153:0,51,255:38,0 chr1 92540102 . T . PASS END=92540102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1594:0,102,255:40,0 chr1 92540103 . C . PASS END=92540103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,7:47:25:47:0,25,1209:0,25,255:38,0 chr1 92540104 . C . PASS END=92540106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:47:0,107,1449:0,107,255:40,0 chr1 92540107 . C . PASS END=92540107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:44:47:0,44,1329:0,44,255:40,0 chr1 92540108 . A . PASS END=92540109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:96:49:0,96,1390:0,96,255:40,0 chr1 92540110 . C . PASS END=92540110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:66:49:0,66,1343:0,66,255:40,0 chr1 92540111 . C . PASS END=92540135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:47:0,80,1451:0,80,255:40,0 chr1 92540136 . T . PASS END=92540136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1601:0,78,255:40,0 chr1 92540137 . C . PASS END=92540141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,103,1677:0,103,255:40,0 chr1 92540142 . T . PASS END=92540142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:73:52:0,73,1601:0,73,255:40,0 chr1 92540143 . C . PASS END=92540155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:51:0,103,1636:0,103,255:40,0 chr1 92540156 . T . PASS END=92540156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:74:57:0,74,1744:0,74,255:40,0 chr1 92540157 . T . PASS END=92540176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:57:0,103,1800:0,103,255:40,0 chr1 92540177 . A . PASS END=92540177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:75:61:0,75,2116:0,75,255:40,0 chr1 92540178 . A . PASS END=92540207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:99:59:0,108,1768:0,108,255:40,0 chr1 92540208 . C . PASS END=92540208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:78:62:0,78,1959:0,78,255:40,2 chr1 92540209 . C . PASS END=92540210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:80:61:0,80,1954:0,80,255:40,2 chr1 92540211 . T . PASS END=92540211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:55:60:0,55,1820:0,55,255:40,2 chr1 92540212 . C . PASS END=92540212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,7:61:23:61:0,23,1804:0,23,255:40,0 chr1 92540213 . A . PASS END=92540549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:89:35:0,89,1294:0,89,255:40,0 chr1 92540550 . T . PASS END=92540550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 92540551 . A . PASS END=92540998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:35:0,84,1372:0,84,255:40,0 chr1 92546129 . A . PASS END=92546147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 92546148 . G . PASS END=92546157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 92546158 . C . PASS END=92546165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:18,0 chr1 92546166 . T . PASS END=92546166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 92546167 . A . PASS END=92546167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 92546168 . C . PASS END=92546186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 92546187 . T . PASS END=92546187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 92546188 . T . PASS END=92546193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,703:0,60,255:21,0 chr1 92546194 . T . PASS END=92546194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr1 92546195 . A . PASS END=92546197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:21,0 chr1 92546198 . G . PASS END=92546198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 92546199 . G . PASS END=92546210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 92546211 . A . PASS END=92546211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 92546212 . G . PASS END=92546218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 92546219 . T . PASS END=92546219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 92546220 . G . PASS END=92546227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 92546228 . C . PASS END=92546254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 92546255 . C . PASS END=92546255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 92546256 . A . PASS END=92546266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 92546267 . G . PASS END=92546267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 92546268 . A . PASS END=92546269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 92546270 . T . PASS END=92546274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 92546275 . C . PASS END=92546275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 92546276 . A . PASS END=92546277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 92554255 . G . PASS END=92554282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1095:0,84,255:38,0 chr1 92554283 . G A, 46.08 PASS DP=39;MQ=250.00;MQRankSum=5.137;ReadPosRankSum=3.823;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,15,0:0.395,0.000:38:16,8,0:7,7,0:45:81,0,50,499,814,1314:255,0,255:23,0:4.6085e+01,1.2866e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,10,5:13,10,7,8 chr1 92554284 . T . PASS END=92554320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,114,1710:0,117,255:40,0 chr1 92554321 . C . PASS END=92554452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,136,255:40,0 chr1 92568030 . G . PASS END=92568225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:35:0,90,1313:0,97,255:40,0 chr1 92568226 . G . PASS END=92568226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 92573441 . A . PASS END=92573558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:92:39:0,92,1304:0,92,255:40,0 chr1 92595244 . G . PASS END=92595333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1239:0,86,255:40,0 chr1 92604907 . T . PASS END=92604987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:60:0,120,1800:0,164,255:40,0 chr1 92606672 . T . PASS END=92606768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:74:0,120,1800:0,184,255:40,0 chr1 92612737 . C . PASS END=92612825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:40:0,120,1452:0,120,255:40,0 chr1 92613241 . G . PASS END=92613358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,120,1800:0,138,255:40,0 chr1 92632515 . A . PASS END=92632519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,771:0,69,255:26,0 chr1 92632520 . T . PASS END=92632520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 92632521 . A . PASS END=92632521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,828:0,31,255:24,0 chr1 92632522 . A . PASS END=92632696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:27:0,80,986:0,80,255:40,0 chr1 92632697 . G . PASS END=92632697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 92633405 . T . PASS END=92633542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:44:0,105,1575:0,128,255:40,0 chr1 92634423 . G . PASS END=92634549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1133:0,80,255:40,0 chr1 92634550 . C . PASS END=92634552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1027:0,76,255:26,0 chr1 92636956 . C . PASS END=92637017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:52:0,120,1800:0,130,255:40,0 chr1 92640620 . T . PASS END=92640627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:26,0 chr1 92640628 . A . PASS END=92640687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,972:0,84,255:35,0 chr1 92640688 . C . PASS END=92640688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 92640689 . T . PASS END=92640689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 92640690 . A . PASS END=92640690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:26,0 chr1 92640691 . C . PASS END=92640692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:27,0 chr1 92640693 . A . PASS END=92640712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,1080:0,66,255:25,0 chr1 92640713 . G . PASS END=92640714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:5:25:0,5,814:0,5,255:25,2 chr1 92640715 . A . PASS END=92640715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:26,0 chr1 92640716 . A . PASS END=92640739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,826:0,62,255:26,0 chr1 92642386 . C . PASS END=92643103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:85:36:0,85,1195:0,85,255:40,2 chr1 92643368 . C . PASS END=92643455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:78:0,120,1800:0,218,255:40,0 chr1 92643869 . T . PASS END=92644008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:96:37:0,96,1341:0,98,255:40,0 chr1 92645822 . G . PASS END=92645983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,114,1751:0,114,255:40,0 chr1 92645984 . A . PASS END=92646020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,120,1800:0,141,255:40,0 chr1 92646021 . G A, 215.08 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,31,0:0,25,0:165:253,168,0,2130,168,2130:255,168,0:0,0:2.1508e+02,1.6508e+02,0.0000e+00,4.5000e+02,1.9985e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,28:0,0,31,25 chr1 92646022 . A . PASS END=92646058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:53:0,120,1800:0,143,255:40,0 chr1 92646059 . A . PASS END=92646362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,107,1291:0,107,255:40,0 chr1 92646363 . A . PASS END=92646363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:72:54:0,72,1391:0,72,255:40,0 chr1 92646364 . C . PASS END=92646442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1233:0,89,255:40,1 chr1 92646443 . C . PASS END=92646443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:30,0 chr1 92646444 . T . PASS END=92647185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:35:0,91,1195:0,91,255:40,0 chr1 92647186 . A . PASS END=92647222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:51:0,107,1790:0,107,255:40,0 chr1 92647223 . A G, 223.17 PASS DP=60;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,29,0:0,30,0:173:261,176,0,2127,176,2127:255,180,0:0,0:2.2317e+02,1.7317e+02,0.0000e+00,4.5000e+02,2.0794e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,30:0,0,29,30 chr1 92647224 . T . PASS END=92647260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,131,255:40,0 chr1 92647261 . G . PASS END=92647454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:42:0,88,1475:0,88,255:40,0 chr1 92647455 . T . PASS END=92647455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:74:48:0,74,1570:0,74,255:40,0 chr1 92647456 . C . PASS END=92647494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:98:47:0,98,1688:0,98,255:40,0 chr1 92647495 . G . PASS END=92647531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:42:0,94,1512:0,94,255:40,0 chr1 92647532 . C A, 172.01 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,18,0:0,24,0:122:210,125,0,310,310,310:255,126,0:0,0:1.7201e+02,1.2201e+02,0.0000e+00,3.0678e+02,3.4155e+02,3.0979e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,12,30:0,0,26,16 chr1 92647533 . T . PASS END=92647569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:40:0,93,1455:0,93,255:40,0 chr1 92647570 . G . PASS END=92648099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:35:0,84,1260:0,84,255:40,0 chr1 92648100 . G . PASS END=92648104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1139:0,77,255:26,0 chr1 92648105 . A . PASS END=92648108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 92648109 . C . PASS END=92648136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 92648137 . A . PASS END=92648137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 92648138 . T . PASS END=92648146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 92648147 . C . PASS END=92648152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 92649421 . G . PASS END=92649422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 92649423 . G . PASS END=92649830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:29:0,84,1241:0,87,255:40,1 chr1 92649831 . G . PASS END=92649831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:28,0 chr1 92649832 . A . PASS END=92649852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 92649853 . A . PASS END=92649860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 92649861 . A . PASS END=92649861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:21,0 chr1 92649862 . T . PASS END=92649864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr1 92649865 . T . PASS END=92649865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,2 chr1 92649866 . G . PASS END=92649866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,853:0,9,255:22,2 chr1 92649867 . G . PASS END=92649867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 92649868 . A . PASS END=92649881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,929:0,62,255:25,0 chr1 92649882 . C . PASS END=92649882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 92649883 . A . PASS END=92649884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 92649885 . T . PASS END=92649887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:17,0 chr1 92696978 . A . PASS END=92697043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,148,255:40,0 chr1 92707769 . A . PASS END=92707862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,161,255:40,0 chr1 92709774 . G . PASS END=92709942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:52:0,109,1710:0,109,255:40,0 chr1 92710336 . A . PASS END=92710414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:76:0,120,1800:0,190,255:40,0 chr1 92711097 . A . PASS END=92711104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:42:0,93,1390:0,93,255:40,0 chr1 92711105 . C . PASS END=92711231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:89:49:0,89,1656:0,89,255:40,0 chr1 92711995 . A . PASS END=92711995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 92712087 . T . PASS END=92712203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:63:0,120,1800:0,178,255:40,0 chr1 92712619 . C . PASS END=92712646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:52:0,120,1800:0,123,255:40,0 chr1 92712647 . G . PASS END=92712701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,117,1755:0,143,255:40,0 chr1 92713435 . C . PASS END=92713546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:56:0,120,1800:0,129,255:40,0 chr1 92713553 . A . PASS END=92713553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 92728420 . T . PASS END=92728483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,0:127:99:118:0,120,1800:0,255,255:40,0 chr1 92729180 . C . PASS END=92729289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,123,255:40,0 chr1 92730111 . C . PASS END=92730195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,147,255:40,0 chr1 92731976 . C . PASS END=92732049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:83:0,120,1800:0,178,255:40,0 chr1 92732097 . C . PASS END=92732150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,1:129:99:108:0,120,1800:0,255,255:40,0 chr1 92732257 . C . PASS END=92732298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:96:0,120,1800:0,255,255:40,0 chr1 92733470 . C . PASS END=92733559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:66:0,120,1800:0,198,255:40,0 chr1 92733662 . C . PASS END=92733692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,1:109:99:106:0,120,1800:0,255,255:40,0 chr1 92735280 . C . PASS END=92735321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:111:0,120,1800:0,255,255:40,0 chr1 92735322 . A . PASS END=92735333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:106:0,120,1800:0,255,255:40,0 chr1 92737022 . C . PASS END=92737209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:90:30:0,90,951:0,90,255:40,0 chr1 92752047 . T . PASS END=92752149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:65:0,120,1800:0,185,255:40,0 chr1 92754471 . A . PASS END=92754708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1440:0,116,255:40,0 chr1 92755754 . C . PASS END=92755863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,142,255:40,0 chr1 92756975 . C . PASS END=92756988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,119,1605:0,119,255:40,0 chr1 92756989 . C T, 49.65 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=2.082;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:13,9,0:11,12,0:47:84,0,47,184,184,184:255,0,255:23,0:4.9652e+01,9.0602e-05,5.0000e+01,1.8442e+02,2.1919e+02,1.8743e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,5,13,8:14,10,11,10 chr1 92756990 . A . PASS END=92757026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:95:45:0,95,1657:0,95,255:40,0 chr1 92757027 . T . PASS END=92757094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:56:0,120,1800:0,141,255:40,2 chr1 92762961 . C . PASS END=92763041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,104,1413:0,104,255:40,0 chr1 92763042 . T . PASS END=92763086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:50:0,90,1350:0,110,255:40,0 chr1 92763091 . C . LowGQ END=92763091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,16:47:0:47:0,0,513:255,0,255:27,17 chr1 92763516 . A . PASS END=92763516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr1 92763518 . A . PASS END=92763586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:83:0,120,1800:0,218,255:40,0 chr1 92764043 . C . PASS END=92764111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,99,1527:0,99,255:40,0 chr1 92764495 . C . PASS END=92764495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 92764497 . C . PASS END=92764497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 92764536 . C . PASS END=92764536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 92764631 . A . PASS END=92764643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1083:0,80,255:36,0 chr1 92764644 . C . PASS END=92764644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:35,0 chr1 92764645 . T . PASS END=92764703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1091:0,88,255:37,0 chr1 92765751 . G . PASS END=92765796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:97:0,120,1800:0,253,255:40,0 chr1 92767033 . G . PASS END=92767147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:53:0,105,1575:0,132,255:40,0 chr1 92769534 . G . PASS END=92769538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 92769539 . G . PASS END=92769632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1215:0,90,255:40,0 chr1 92769841 . G . PASS END=92769906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,2:102:99:83:0,120,1800:0,216,255:40,0 chr1 92772745 . T . PASS END=92772833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,159,255:40,0 chr1 92786156 . G . PASS END=92786191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:78:0,120,1800:0,207,255:40,0 chr1 92789002 . T . PASS END=92789013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr1 92789014 . A . PASS END=92789014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 92789015 . G . PASS END=92789015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 92789016 . A . PASS END=92789016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,835:0,45,255:24,0 chr1 92789017 . A . PASS END=92789017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 92789018 . G . PASS END=92789024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:31,0 chr1 92789025 . A . PASS END=92789025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:30,0 chr1 92789026 . G . PASS END=92789062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1280:0,87,255:39,0 chr1 92789063 . A . PASS END=92789063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1488:0,71,255:32,0 chr1 92789064 . A . PASS END=92789776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:36:0,87,1258:0,87,255:40,1 chr1 92789777 . T . PASS END=92789777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 92789778 . T . PASS END=92789910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1258:0,87,255:40,0 chr1 92789911 . C . PASS END=92789927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:26,0 chr1 92789928 . A . PASS END=92789929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 92789930 . G . PASS END=92789932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:22,0 chr1 92798948 . C . PASS END=92799030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:54:0,120,1800:0,162,255:40,0 chr1 92801904 . G . PASS END=92801984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,143,255:40,0 chr1 92811403 . G . PASS END=92811471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:89:0,120,1800:0,251,255:40,0 chr1 92823503 . A . PASS END=92823548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:135,0:135:99:113:0,120,1800:0,255,255:40,0 chr1 92846281 . A . PASS END=92846430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:49:0,110,1800:0,110,255:40,0 chr1 92852568 . A . PASS END=92852580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 92941586 . T . PASS END=92941599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:26,0 chr1 92941600 . G . PASS END=92941610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,879:0,81,255:27,0 chr1 92941611 . C . PASS END=92941611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 92941612 . G . PASS END=92941616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:28,0 chr1 92941617 . C . PASS END=92941617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 92941618 . T . PASS END=92941643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1086:0,87,255:31,0 chr1 92941644 . C . PASS END=92941644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:30,0 chr1 92941645 . C . PASS END=92941662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1093:0,80,255:31,0 chr1 92941663 . A . PASS END=92941663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 92941664 . G . PASS END=92941669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 92941670 . G . PASS END=92941670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 92941671 . G . PASS END=92941683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1094:0,87,255:29,0 chr1 92941684 . T . PASS END=92941693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,920:0,73,255:26,0 chr1 92941694 . G . PASS END=92941694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 92941695 . C . PASS END=92941695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:28,0 chr1 92941696 . T . PASS END=92941696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:29,0 chr1 92941697 . G . PASS END=92941697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 92941698 . T . PASS END=92941705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 92941706 . G . PASS END=92941707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 92941708 . G . PASS END=92941708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 92941709 . G . PASS END=92941709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 92941710 . T . PASS END=92941714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 92941715 . G . PASS END=92941715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 92941716 . C . PASS END=92941718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 92941719 . T . PASS END=92941743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,65,255:26,0 chr1 92941744 . G . PASS END=92941744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 92941745 . G . PASS END=92941747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 92941748 . C . PASS END=92941748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 92941749 . T . PASS END=92941753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 92941754 . A . PASS END=92941754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:20,0 chr1 92941755 . G . PASS END=92941758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 92941759 . T . PASS END=92941764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,640:0,49,255:19,0 chr1 92944145 . C . PASS END=92944264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,120,1800:0,140,255:40,0 chr1 92944265 . A . PASS END=92944306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:47:0,81,1215:0,89,255:40,0 chr1 92944307 . G . PASS END=92944310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:78:47:0,78,1170:0,124,255:26,0 chr1 92944314 . CAG C,CAGAGAG,CAGAGAGAG, 52.48 PASS DP=47;MQ=248.76;MQRankSum=3.229;ReadPosRankSum=1.297;FractionInformativeReads=0.596;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/3:8,8,7,5,0:0.286,0.250,0.179,0.000:28:4,5,2,4,0:4,3,5,1,0:3:53,157,88,0,38,47,0,53,126,47,257,257,257,257,257:255,0,255:8,18:5.2479e+01,1.6005e+02,9.4206e+01,3.2641e+00,4.4206e+01,5.3264e+01,2.7709e+00,5.8269e+01,1.3145e+02,5.2771e+01,2.9182e+02,2.9482e+02,2.9482e+02,2.9482e+02,2.9483e+02:0.00,3.00,6.01,3.00,6.00,6.01,3.00,6.00,6.00,6.01,34.77,37.77,37.77,37.77,37.78:4,4,8,12:0,8,7,13 chr1 92944316 . G . LowGQ END=92944316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,9:50:0:50:0,0,1232:163,0,255:15,9 chr1 92945905 . C . PASS END=92945905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 92945906 . T . PASS END=92945906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 92945907 . G . PASS END=92945922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 92945923 . G . PASS END=92945923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 92945924 . T . PASS END=92945927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 92945928 . G . PASS END=92945933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 92945934 . G . PASS END=92945934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 92945935 . G . PASS END=92945959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 92945960 . C . PASS END=92945964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 92945965 . C . PASS END=92945971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 92945972 . C . PASS END=92945990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:19,0 chr1 92945991 . C . PASS END=92945991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr1 92945992 . G . PASS END=92946001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 92946002 . C . PASS END=92946010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 92946011 . T . PASS END=92946016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:13:0,26,405:0,26,255:11,0 chr1 92946017 . T . LowGQ END=92946017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:9,0 chr1 92946018 . C . PASS END=92946022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 92946023 . C . PASS END=92946042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 92946158 . C . PASS END=92946170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 92946171 . A . PASS END=92946177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 92946178 . T . PASS END=92946184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 92946185 . G . PASS END=92946187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 92946188 . G . PASS END=92946188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 92946189 . C . PASS END=92946230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr1 92946231 . T . PASS END=92946231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 92946232 . T . PASS END=92946248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 92946249 . T . PASS END=92946249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 92946250 . C . PASS END=92946254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 92946255 . T . PASS END=92946259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 92946260 . C . PASS END=92946263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 92946264 . T . PASS END=92946265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:13,0 chr1 92946266 . G . PASS END=92946268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 92946269 . A . PASS END=92946271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 92946272 . C . PASS END=92946272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 92946273 . T . PASS END=92946275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 92946276 . G . PASS END=92946278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 92946279 . T . PASS END=92946280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 92946281 . C . PASS END=92946288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 92946289 . C . PASS END=92946289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 92946290 . C . PASS END=92946301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 92946302 . G . PASS END=92946302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,464:0,28,255:13,0 chr1 92946303 . G . PASS END=92946303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 92946304 . G . PASS END=92946305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 92946306 . C . PASS END=92946307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:9,0 chr1 92946308 . C . PASS END=92946313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 92946314 . C . PASS END=92946314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:9,0 chr1 92946315 . A . PASS END=92946340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 92946341 . G . PASS END=92946341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 92946342 . C . PASS END=92946345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 92946346 . A . PASS END=92946374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 92946375 . C . PASS END=92946375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 92946376 . C . PASS END=92946418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,255:9,0 chr1 92946419 . G . PASS END=92946428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 92946429 . C . PASS END=92946435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 92946436 . G . PASS END=92946436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 92946437 . G . PASS END=92946441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 92946442 . A . PASS END=92946472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:8,0 chr1 92946473 . G . PASS END=92946476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 92946477 . T . PASS END=92946478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 92946479 . G A, 37.96 PASS DP=8;MQ=250.00;MQRankSum=1.920;ReadPosRankSum=0.956;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,3,0:0.375,0.000:8:2,1,0:3,2,0:38:73,0,50,107,179,286:92,0,170:5,0:3.7962e+01,7.1606e-04,5.3001e+01,1.0732e+02,2.1359e+02,2.8914e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,0,3:1,4,2,1 chr1 92946480 . C . PASS END=92946485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 92946486 . A . PASS END=92946486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 92946487 . G . PASS END=92946505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 92946506 . C . PASS END=92946516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 92946517 . C . PASS END=92946533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:11,0 chr1 92946534 . T . LowGQ END=92946534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,225:0,0,225:9,0 chr1 92946535 . G . PASS END=92946542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 92946543 . T . PASS END=92946543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 92946544 . G . PASS END=92946578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 92946579 . T . PASS END=92946615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 92946616 . C . PASS END=92946645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:6,0 chr1 92948421 . C . PASS END=92948448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 92948449 . C . PASS END=92948449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 92948450 . C . PASS END=92948457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 92948458 . C . PASS END=92948459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 92948460 . C . PASS END=92948508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:13,0 chr1 92948509 . T . PASS END=92948509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 92948510 . G . PASS END=92948513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 92948514 . A . PASS END=92948515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:12:0,23,405:0,23,255:9,0 chr1 92948516 . G . PASS END=92948517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 92948518 . T . PASS END=92948518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:8,0 chr1 92948519 . C . PASS END=92948520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 92948521 . G . PASS END=92948522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:11,0 chr1 92948523 . C . PASS END=92948523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 92948524 . T . LowGQ END=92948526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,416:0,0,255:11,0 chr1 92948527 . G . PASS END=92948527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 92948528 . G . PASS END=92948528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:10,0 chr1 92948529 . C . PASS END=92948532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 92948533 . G . PASS END=92948534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 92948535 . T . PASS END=92948535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 92948536 . C . PASS END=92948541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 92948542 . C . PASS END=92948542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 92948543 . G . PASS END=92948547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 92948548 . G . PASS END=92948548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr1 92948549 . G . PASS END=92948564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:8:0,24,288:0,24,255:8,0 chr1 92948565 . G . PASS END=92948566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 92948567 . G . PASS END=92948570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 92948571 . C . PASS END=92948571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 92948572 . C . PASS END=92948582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 92948583 . C . PASS END=92948583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 92948584 . G . PASS END=92948586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 92948587 . T . PASS END=92948597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,195:6,0 chr1 92948598 . T . PASS END=92948603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 92948930 . C . PASS END=92948931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 92948932 . G . PASS END=92948939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 92948940 . A . PASS END=92948940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 92948941 . G . PASS END=92948943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 92948944 . G . PASS END=92948944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 92948945 . C . PASS END=92948947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:22,0 chr1 92948948 . G . PASS END=92948948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 92948949 . T . PASS END=92948956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,64,255:26,0 chr1 92948957 . C . PASS END=92948957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 92948958 . T . PASS END=92948959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 92948960 . A . PASS END=92948966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 92948967 . G . PASS END=92948967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 92948968 . G . PASS END=92948968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 92948969 . A . PASS END=92948969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 92948970 . A . PASS END=92949008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:31:0,92,1166:0,92,255:36,0 chr1 92949009 . A . PASS END=92949009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:35,0 chr1 92949010 . G . PASS END=92949030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1238:0,91,255:36,0 chr1 92949031 . A . PASS END=92949031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 92949032 . A . PASS END=92949044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1268:0,89,255:35,0 chr1 92949051 . C . PASS END=92949051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 92979213 . T . PASS END=92979316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:34:0,83,1459:0,83,255:40,0 chr1 92979317 . C . PASS END=92979353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,111,1665:0,123,255:40,0 chr1 92979354 . A G, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.425;ReadPosRankSum=1.274;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,23,0:0.561,0.000:41:6,11,0:12,12,0:46:85,0,46,185,185,185:255,0,255:16,0:5.0000e+01,1.0070e-04,4.8800e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,10,10,13:8,10,14,9 chr1 92979355 . C . PASS END=92979391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1278:0,87,255:40,0 chr1 92979392 . C . PASS END=92979410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1216:0,83,255:32,0 chr1 92979411 . A . PASS END=92979421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1041:0,71,255:26,0 chr1 92979422 . C . PASS END=92979424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 92979425 . A . PASS END=92979426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 92979427 . G . PASS END=92979434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:31,0 chr1 92979435 . T . PASS END=92979435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:28,0 chr1 92979436 . G . PASS END=92979483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1164:0,83,255:31,0 chr1 92979484 . G . PASS END=92979489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 92979490 . T . PASS END=92979491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 92979492 . G . PASS END=92979509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr1 92979510 . G . PASS END=92979510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 92979511 . C . PASS END=92979527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr1 92980503 . T . PASS END=92980510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1264:0,92,255:39,0 chr1 92980511 . A . PASS END=92980511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1299:0,78,255:38,0 chr1 92980512 . G . PASS END=92980601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:34:0,85,1253:0,85,255:40,0 chr1 93001594 . C . PASS END=93001603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:81:0,120,1800:0,191,255:40,0 chr1 93029199 . C . PASS END=93029294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:44:0,120,1800:0,130,255:40,0 chr1 93070864 . C . PASS END=93070959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,120,1800:0,137,255:40,0 chr1 93073138 . C . PASS END=93073150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,101,1380:0,101,255:39,0 chr1 93073151 . T . PASS END=93073151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:38,0 chr1 93073152 . C . PASS END=93073279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:38:0,96,1388:0,98,255:40,0 chr1 93073280 . T . PASS END=93073280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:31,0 chr1 93073281 . G . PASS END=93073283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 93073284 . T . PASS END=93073284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:30,0 chr1 93089733 . C . PASS END=93089785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,169,255:40,0 chr1 93089786 . T . PASS END=93089822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,206,255:40,0 chr1 93089823 . T C, 50.00 PASS DP=74;MQ=250.00;MQRankSum=7.392;ReadPosRankSum=4.818;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,38,0:0.514,0.000:74:17,19,0:19,19,0:48:85,0,50,1351,1258,2609:255,0,255:34,0:5.0000e+01,6.5492e-05,5.2926e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,20,16,22:19,17,17,21 chr1 93089824 . T . PASS END=93089860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:66:0,120,1800:0,183,255:40,0 chr1 93089861 . T . PASS END=93089891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,102,1530:0,125,255:40,0 chr1 93091351 . C . PASS END=93091491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:40:0,86,1200:0,86,255:40,0 chr1 93101759 . C . PASS END=93101762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,743:0,60,255:21,0 chr1 93101763 . T . PASS END=93101763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 93101764 . C . PASS END=93101766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,0 chr1 93101767 . T . PASS END=93101767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr1 93101768 . A . PASS END=93101774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,840:0,75,255:25,0 chr1 93101775 . A . PASS END=93101777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 93101778 . T . PASS END=93101779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 93101780 . A . PASS END=93101893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:31:0,93,1111:0,93,255:40,0 chr1 93128276 . C . PASS END=93128298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,515:0,48,255:19,0 chr1 93128299 . T . PASS END=93128325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,784:0,63,255:26,0 chr1 93128326 . G . PASS END=93128395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1250:0,89,255:35,0 chr1 93128396 . A . PASS END=93128422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,937:0,62,255:26,0 chr1 93128977 . C . PASS END=93129009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:80:0,120,1800:0,227,255:40,0 chr1 93131496 . T . PASS END=93131549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:80:0,120,1800:0,223,255:40,0 chr1 93142715 . T . PASS END=93142775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:68:0,120,1800:0,203,255:40,0 chr1 93159359 . T . PASS END=93159418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,127,255:40,0 chr1 93159419 . A . PASS END=93159456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,158,255:40,0 chr1 93159856 . C . PASS END=93159867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:87:0,120,1800:0,229,255:40,0 chr1 93159868 . T . PASS END=93159945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:69:0,120,1800:0,198,255:40,0 chr1 93160867 . C . PASS END=93160901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:47:0,120,1800:0,129,255:40,0 chr1 93160902 . T C, 48.84 PASS DP=57;MQ=250.00;MQRankSum=6.425;ReadPosRankSum=3.321;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,25,0:0.439,0.000:57:22,14,0:10,11,0:47:84,0,50,894,1079,1973:255,0,255:32,0:4.8842e+01,7.8435e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,11,16,9:15,17,13,12 chr1 93160903 . T . PASS END=93160939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,119,1800:0,119,255:40,0 chr1 93160940 . C . PASS END=93161010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:98:42:0,98,1530:0,98,255:40,0 chr1 93163417 . C . PASS END=93163422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,118,1659:0,118,255:40,0 chr1 93163423 . C . PASS END=93163542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,124,255:40,0 chr1 93167698 . C . PASS END=93167772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:75:0,120,1800:0,195,255:40,0 chr1 93168952 . C . PASS END=93168957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 93168958 . T . PASS END=93168958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 93168959 . A . PASS END=93168976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,986:0,81,255:34,0 chr1 93168977 . T . PASS END=93168977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1058:0,46,255:32,0 chr1 93168978 . G . PASS END=93169149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1150:0,80,255:40,0 chr1 93169150 . A . PASS END=93169173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,937:0,62,255:26,0 chr1 93169174 . T . PASS END=93169174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 93169175 . T . PASS END=93169175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 93169176 . C . PASS END=93169176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 93169398 . C . PASS END=93169408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:59:0,107,1800:0,107,255:40,0 chr1 93169409 . A G, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.588;ReadPosRankSum=2.236;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,30,0:0.508,0.000:59:12,15,0:17,15,0:48:85,0,50,1073,971,2044:255,0,255:25,0:5.0000e+01,6.5492e-05,5.2957e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,18,12:13,16,15,15 chr1 93169410 . C . PASS END=93169473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:84:57:0,84,1260:0,99,255:40,0 chr1 93169474 . A . PASS END=93169478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:63:54:0,63,945:0,68,255:24,0 chr1 93170112 . C . PASS END=93170278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,94,255:40,0 chr1 93170279 . A . PASS END=93170284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1080:0,85,255:25,0 chr1 93170285 . T . PASS END=93170285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:22,0 chr1 93170286 . A . PASS END=93170301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:24,0 chr1 93179554 . C . PASS END=93179567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:83:0,120,1800:0,224,255:40,0 chr1 93201955 . C . PASS END=93202169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:30:0,82,1117:0,82,255:40,0 chr1 93202170 . T . PASS END=93202170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 93202171 . T . PASS END=93202180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 93202181 . C . PASS END=93202182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 93202183 . A . PASS END=93202183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:23,0 chr1 93202184 . C . PASS END=93202184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:24,0 chr1 93249811 . C . PASS END=93249852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,141,255:40,0 chr1 93257901 . C . PASS END=93257951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:60:0,120,1800:0,159,255:40,0 chr1 93297602 . T . PASS END=93297602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 93297608 . C . PASS END=93297608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 93297626 . C . PASS END=93297626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 93297670 . G . PASS END=93297670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 93297672 . A . PASS END=93297672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 93297673 . T . PASS END=93297674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 93297685 . G . PASS END=93297685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 93298577 . T . PASS END=93298591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,155,255:40,0 chr1 93298935 . T . PASS END=93298936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1731:0,114,255:40,0 chr1 93298946 . G . PASS END=93299017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,127,255:40,0 chr1 93299101 . G . PASS END=93299185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,117,1755:0,118,255:40,0 chr1 93299186 . T . PASS END=93299186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:43:47:0,43,1270:0,43,255:40,0 chr1 93299187 . T . PASS END=93299217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:40:0,95,1354:0,95,255:40,0 chr1 93299353 . T . PASS END=93299355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 93300328 . T . PASS END=93300328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 93300336 . A . PASS END=93300468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:37:0,81,1215:0,94,255:40,0 chr1 93300469 . G . PASS END=93300469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr1 93300470 . G . PASS END=93300470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 93301747 . C . PASS END=93301904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:33:0,84,1258:0,91,255:40,0 chr1 93301905 . T . PASS END=93301905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 93301906 . G . PASS END=93301912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:28,0 chr1 93301913 . A . PASS END=93301921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:24,0 chr1 93301922 . T . PASS END=93301924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 93301925 . A . PASS END=93301926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 93301927 . G . PASS END=93301935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,63,255:16,0 chr1 93301936 . T . PASS END=93301949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr1 93303013 . T . PASS END=93303015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr1 93303016 . C . PASS END=93303016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 93303017 . A . PASS END=93303190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:32:0,80,1115:0,80,255:40,0 chr1 93306108 . A . PASS END=93306108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr1 93306109 . T . PASS END=93306109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 93306110 . G . PASS END=93306196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:30:0,80,1114:0,80,255:40,0 chr1 93307323 . G . PASS END=93307334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:19,0 chr1 93307335 . C . PASS END=93307336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 93307337 . A . PASS END=93307338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 93307339 . A . PASS END=93307339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:17,0 chr1 93307340 . T . PASS END=93307342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 93307343 . C . PASS END=93307391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,760:0,63,255:24,0 chr1 93307392 . C . PASS END=93307401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 93307402 . G . PASS END=93307402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 93307403 . A . PASS END=93307421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 93307422 . A . PASS END=93307422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 93308940 . C . PASS END=93309711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:31:0,81,1215:0,84,255:40,0 chr1 93309712 . T . PASS END=93309726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:24,0 chr1 93309727 . A . PASS END=93309727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 93309728 . G . PASS END=93309729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 93309730 . T . PASS END=93309752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:19,0 chr1 93312740 . C . PASS END=93312916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:96:43:0,96,1440:0,113,255:40,0 chr1 93316405 . C . PASS END=93316512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:35:0,93,1395:0,105,255:40,0 chr1 93341853 . T . PASS END=93341858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1252:0,105,255:35,0 chr1 93341859 . T . PASS END=93341859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:34,0 chr1 93341860 . T . PASS END=93341864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:38,0 chr1 93341865 . A . PASS END=93341865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:36,0 chr1 93341866 . C . PASS END=93341870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,108,1620:0,117,255:40,0 chr1 93341871 . C . PASS END=93341871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:40,0 chr1 93341872 . T . PASS END=93341987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:98:45:0,98,1660:0,98,255:40,0 chr1 93426933 . C . PASS END=93426936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 93426937 . A . PASS END=93426963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:18,0 chr1 93426964 . C . PASS END=93426964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 93426965 . C . PASS END=93426970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 93426971 . A . PASS END=93426971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 93426972 . G . PASS END=93426973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 93426974 . G . PASS END=93426983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 93426984 . C . PASS END=93426984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 93426985 . A . PASS END=93426985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:12,0 chr1 93426986 . T . PASS END=93426986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 93545084 . A . PASS END=93545084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,975:0,41,255:31,0 chr1 93545085 . T . PASS END=93545086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1181:0,88,255:31,0 chr1 93545087 . A . PASS END=93545087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1152:0,58,255:32,0 chr1 93545088 . G . PASS END=93545088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1343:0,97,255:32,0 chr1 93575787 . A . PASS END=93575788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 93575789 . A . PASS END=93575985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:28:0,81,1202:0,84,255:40,0 chr1 93576102 . A . PASS END=93576183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,170,255:40,0 chr1 93580245 . G . PASS END=93580340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:42:0,101,1504:0,101,255:40,0 chr1 93580545 . G . PASS END=93580580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:52:0,120,1800:0,140,255:40,0 chr1 93580581 . G C, 314.40 PASS DP=89;MQ=249.83;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,89,0:1.000,0.000:89:0,54,0:0,35,0:264:352,267,0,3388,267,3388:255,255,0:0,0:3.1440e+02,2.6440e+02,0.0000e+00,4.4853e+02,2.9917e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,58,31:0,0,47,42 chr1 93580582 . C . PASS END=93580618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:87:0,120,1800:0,243,255:40,0 chr1 93580619 . C . PASS END=93580645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:73:0,120,1800:0,180,255:40,0 chr1 93581027 . A . PASS END=93581061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:38:0,90,1433:0,90,255:40,0 chr1 93581062 . A . PASS END=93581159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:37:0,84,1260:0,93,255:40,0 chr1 93581160 . G . PASS END=93581175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:27:0,72,1080:0,81,255:26,0 chr1 93583902 . C . PASS END=93583910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:80:57:0,80,1800:0,80,255:40,0 chr1 93583911 . G . PASS END=93583911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:68:57:0,68,1799:0,68,255:40,0 chr1 93583912 . A . PASS END=93583997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:57:0,106,1800:0,106,255:40,0 chr1 93584890 . A . PASS END=93584922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:70:0,120,1800:0,127,255:40,0 chr1 93584923 . T . PASS END=93584958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:73:0,120,1800:0,219,255:40,0 chr1 93586106 . G . PASS END=93586229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:54:0,120,1800:0,146,255:40,0 chr1 93586352 . T . PASS END=93586426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:95:52:0,95,1608:0,95,255:40,0 chr1 93592789 . C . PASS END=93592856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:82:0,120,1800:0,163,255:40,2 chr1 93594835 . G . PASS END=93594835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr1 93594836 . T . PASS END=93595005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:35:0,90,1350:0,95,255:40,0 chr1 93599260 . G . PASS END=93599365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:58:0,120,1800:0,154,255:40,1 chr1 93599485 . G . PASS END=93599537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:76:0,120,1800:0,172,255:40,0 chr1 93599648 . G . PASS END=93599752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:90:42:0,90,1350:0,116,255:40,0 chr1 93602227 . A . PASS END=93602231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1373:0,101,255:39,0 chr1 93602232 . C . PASS END=93602581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:82:38:0,82,1149:0,82,255:40,0 chr1 93602582 . T . PASS END=93602584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 93620227 . T . PASS END=93620355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:46:0,120,1800:0,134,255:40,1 chr1 93620356 . T . PASS END=93620392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:57:0,120,1800:0,139,255:40,0 chr1 93620393 . G A, 221.10 PASS DP=58;MQ=249.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,30,0:0,28,0:171:259,174,0,2219,174,2219:255,174,0:0,0:2.2110e+02,1.7110e+02,0.0000e+00,4.5000e+02,2.0587e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,39:0,0,23,35 chr1 93620394 . T . PASS END=93620424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:84:43:0,84,1260:0,122,255:40,0 chr1 93620425 . C . PASS END=93620430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 93620431 . G . PASS END=93620439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,70,255:25,0 chr1 93620440 . G . PASS END=93620440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 93620441 . G . PASS END=93620443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:20,0 chr1 93620444 . T . PASS END=93620445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:18,0 chr1 93621593 . C . PASS END=93621641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:71:0,120,1800:0,189,255:40,0 chr1 93621839 . T . PASS END=93622040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,2:94:99:58:0,102,1530:0,157,255:40,0 chr1 93624372 . C . PASS END=93624373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 93624374 . T C, 95.15 PASS DP=16;MQ=228.51;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,9,0:0,7,0:45:133,48,0,610,48,610:255,48,0:0,0:9.5152e+01,4.5152e+01,1.3254e-04,4.5000e+02,7.9922e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,6:0,0,7,9 chr1 93624375 . G . PASS END=93624380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:16,0 chr1 93624381 . G . PASS END=93624381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 93624382 . G . PASS END=93624384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 93624385 . A . PASS END=93624385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 93624386 . G . PASS END=93624389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 93624390 . T . PASS END=93624390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 93624391 . G . PASS END=93624391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 93624392 . G . PASS END=93624392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 93624393 . G . PASS END=93624396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 93624397 . A . PASS END=93624397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 93624398 . T . PASS END=93624406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 93624407 . A . PASS END=93624407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:21,0 chr1 93624408 . C . PASS END=93624411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 93624412 . A . PASS END=93624434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,795:0,72,255:24,0 chr1 93624435 . T . PASS END=93624435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 93624436 . T . PASS END=93624442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 93625686 . G . PASS END=93625783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:99:45:0,108,1620:0,121,255:40,0 chr1 93645611 . T . PASS END=93645619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 93645620 . G . PASS END=93645620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 93645621 . A . PASS END=93645621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 93645622 . T . PASS END=93645622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 93645623 . C . PASS END=93645640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:17,0 chr1 93645641 . G . PASS END=93645641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 93645642 . G . PASS END=93645649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 93645650 . C . PASS END=93645650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr1 93645651 . T . PASS END=93645651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 93645652 . G . PASS END=93645653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 93645654 . T . PASS END=93645655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 93645656 . G . PASS END=93645656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 93645657 . A . PASS END=93645672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 93645673 . C . PASS END=93645681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 93645682 . G . PASS END=93645700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 93645701 . A . PASS END=93645723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:18:0,43,668:0,43,255:19,0 chr1 93645724 . C . PASS END=93645724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr1 93645725 . C . PASS END=93645730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 93645731 . A . PASS END=93645731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 93645732 . G . PASS END=93645781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:18,0 chr1 93645782 . C . PASS END=93645799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 93646088 . A . PASS END=93646100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr1 93646101 . C . PASS END=93646101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 93646102 . C . PASS END=93646103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 93646104 . A . PASS END=93646104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,382:0,11,255:13,0 chr1 93646105 . T . PASS END=93646116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 93646117 . C . LowGQ END=93646117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,433:10,0,255:13,0 chr1 93646118 . G . PASS END=93646134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,483:0,45,255:15,0 chr1 93646135 . T . PASS END=93646135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 93646136 . A . PASS END=93646145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 93646146 . G . PASS END=93646146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 93646147 . G . PASS END=93646148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 93646149 . C . PASS END=93646154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 93646155 . T . PASS END=93646155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr1 93646156 . A . PASS END=93646165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 93646166 . G . PASS END=93646166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 93646167 . G . PASS END=93646169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 93646170 . C . PASS END=93646171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 93646172 . C . PASS END=93646189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,303:0,27,255:9,0 chr1 93646190 . C . PASS END=93646199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 93646200 . C . PASS END=93646200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 93646201 . G . PASS END=93646201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 93646202 . C . PASS END=93646202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 93646203 . G . PASS END=93646203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 93646204 . C . PASS END=93646206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 93646207 . T C, 74.10 PASS DP=9;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,4,0:0,5,0:24:112,27,0,349,27,349:255,30,0:0,0:7.4104e+01,2.4104e+01,1.6918e-02,3.4593e+02,5.8874e+01,3.4893e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,4:0,0,8,1 chr1 93646208 . C . PASS END=93646211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 93646212 . G . PASS END=93646212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr1 93646213 . G . PASS END=93646213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 93646214 . C . PASS END=93646214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:6,0 chr1 93646215 . G . PASS END=93646219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 93646220 . A . PASS END=93646220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,243:6,0 chr1 93646221 . C . LowGQ END=93646222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,188:0,0,203:6,0 chr1 93646223 . C . PASS END=93646225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:14:8:0,14,225:0,14,255:6,0 chr1 93646226 . T . PASS END=93646227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 93646228 . T . PASS END=93646229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:9:0,17,270:0,17,255:8,0 chr1 93646230 . C . PASS END=93646230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 93646231 . G . LowGQ END=93646231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,364:3,0,255:9,0 chr1 93646232 . C . PASS END=93646234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 93646235 . G . PASS END=93646235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 93646236 . G . PASS END=93646237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 93646238 . C . PASS END=93646239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 93646240 . G . PASS END=93646243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 93646244 . A . PASS END=93646244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 93646245 . G . PASS END=93646245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 93646246 . T . PASS END=93646246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 93646247 . G . PASS END=93646247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 93646248 . A . PASS END=93646248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 93646249 . C . PASS END=93646250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 93646251 . G . PASS END=93646259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 93646260 . C . PASS END=93646264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 93646265 . C . PASS END=93646265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 93646266 . A . PASS END=93646269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 93646270 . G . PASS END=93646270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 93646271 . C . PASS END=93646272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 93646273 . C . PASS END=93646273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 93646274 . C . PASS END=93646275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 93646276 . G . PASS END=93646276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 93646277 . C . PASS END=93646279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 93646280 . C . PASS END=93646281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 93646282 . G . PASS END=93646284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 93646285 . C . PASS END=93646285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 93646286 . G . PASS END=93646287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 93646288 . A . PASS END=93646288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,553:0,23,255:17,0 chr1 93646289 . T . PASS END=93646329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,631:0,51,255:18,0 chr1 93646330 . G . PASS END=93646330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 93646331 . A . PASS END=93646355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 93646356 . A . PASS END=93646356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:15,0 chr1 93646357 . A . PASS END=93646358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 93646359 . G . PASS END=93646359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:15,0 chr1 93646360 . G . PASS END=93646366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,553:0,48,255:17,0 chr1 93646367 . G . PASS END=93646370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 93646371 . T . PASS END=93646371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 93646372 . C . PASS END=93646372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:13,0 chr1 93646373 . C . PASS END=93646373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 93646374 . T . PASS END=93646374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 93646375 . A . PASS END=93646380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 93646381 . G . PASS END=93646386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 93646387 . A . PASS END=93646387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 93646388 . G . PASS END=93646395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 93646396 . C . PASS END=93646396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 93646397 . G . PASS END=93646399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 93646400 . C . PASS END=93646400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 93646401 . A . PASS END=93646401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:9,0 chr1 93646402 . G . PASS END=93646402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:9,0 chr1 93646403 . T . PASS END=93646407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 93646408 . G . PASS END=93646408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:9,0 chr1 93646409 . G . PASS END=93646416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr1 93646417 . T . PASS END=93646417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr1 93646418 . C T, 50.00 PASS DP=11;MQ=250.00;MQRankSum=2.520;ReadPosRankSum=2.520;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,7,0:0.636,0.000:11:4,2,0:0,5,0:48:85,0,48,242,143,385:244,0,119:2,0:5.0000e+01,7.6364e-05,5.1201e+01,2.4240e+02,1.7780e+02,3.8843e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,4,3:1,3,3,4 chr1 93646419 . T . PASS END=93646419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 93646420 . C . PASS END=93646422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 93646423 . C . PASS END=93646427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 93646428 . A . PASS END=93646428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 93646429 . C . PASS END=93646433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 93646434 . T . PASS END=93646439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 93648917 . A . PASS END=93649052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:50:0,120,1800:0,147,255:40,0 chr1 93649535 . T . PASS END=93649694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,117,1780:0,117,255:40,1 chr1 93649695 . A . PASS END=93649703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,99,1575:0,99,255:40,0 chr1 93651902 . A . PASS END=93652060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:40:0,102,1530:0,110,255:40,0 chr1 93657557 . G . PASS END=93657663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:34:0,99,1485:0,102,255:40,0 chr1 93659173 . A . PASS END=93659301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:61:0,120,1800:0,166,255:40,0 chr1 93667449 . A . PASS END=93667545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:45:0,111,1800:0,111,255:40,3 chr1 93671067 . G . PASS END=93671188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,2:107:99:83:0,120,1800:0,222,255:40,0 chr1 93672664 . G . PASS END=93672685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1329:0,98,255:40,0 chr1 93672686 . A . PASS END=93672722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,118,1568:0,118,255:40,0 chr1 93672723 . A C, 227.12 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,30,0:0,30,0:177:265,180,0,2256,180,2256:255,180,0:0,0:2.2712e+02,1.7712e+02,0.0000e+00,4.5000e+02,2.1189e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,33:0,0,33,27 chr1 93672724 . T . PASS END=93672760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,145,255:40,0 chr1 93672761 . A . PASS END=93672928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:30:0,80,1141:0,80,255:40,0 chr1 93672929 . T . PASS END=93672929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 93672930 . T . PASS END=93672935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 93672936 . A . PASS END=93672941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1078:0,73,255:25,0 chr1 93672942 . T . PASS END=93672942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,925:0,57,255:22,0 chr1 93672943 . A . PASS END=93672944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:24,0 chr1 93672945 . C . PASS END=93672945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:24,0 chr1 93672946 . C . PASS END=93672954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 93672955 . A . PASS END=93672955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 93676359 . T . PASS END=93676483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,115,1743:0,115,255:40,0 chr1 93677658 . A . PASS END=93677818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,3:72:99:45:0,99,1485:0,122,255:40,0 chr1 93680300 . C . PASS END=93680523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:87:32:0,87,1175:0,87,255:40,0 chr1 93682193 . A . PASS END=93682303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:39:0,84,1260:0,101,255:40,0 chr1 93683295 . G . PASS END=93683426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:59:0,120,1800:0,135,255:40,0 chr1 93687166 . C . PASS END=93687300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,103,1405:0,103,255:40,0 chr1 93687416 . G . PASS END=93687479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:85:0,120,1800:0,208,255:40,0 chr1 93687480 . A . PASS END=93687493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:83:0,120,1800:0,204,255:40,1 chr1 93691890 . G . PASS END=93691899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:57:0,120,1800:0,122,255:40,0 chr1 93691900 . T . PASS END=93691900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,9:63:39:63:0,39,1642:0,39,255:40,0 chr1 93691901 . A . PASS END=93691901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr1 93691902 . G . PASS END=93691902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,3:66:99:66:0,120,1800:0,134,255:40,0 chr1 93691903 . A . PASS END=93691903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:61:66:0,61,1807:0,61,255:40,0 chr1 93691904 . T . PASS END=93691920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:66:0,104,1800:0,104,255:40,0 chr1 93691921 . G . PASS END=93691921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,7:70:43:70:0,43,2056:0,43,255:40,0 chr1 93691922 . T . PASS END=93692006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,141,255:40,0 chr1 93697983 . G . PASS END=93698148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:42:0,84,1260:0,126,255:40,0 chr1 93698149 . A . PASS END=93698150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,110,255:26,0 chr1 93701805 . G . PASS END=93701947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:53:0,120,1800:0,155,255:40,0 chr1 93702819 . A . PASS END=93702834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,192,255:40,0 chr1 93704867 . G . PASS END=93705030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:89:34:0,89,1249:0,89,255:40,1 chr1 93705240 . T . PASS END=93705453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:52:0,120,1800:0,145,255:40,0 chr1 93710987 . A . PASS END=93711050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,185,255:40,0 chr1 93711662 . A . PASS END=93711744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:89:39:0,89,1287:0,89,255:40,0 chr1 93711745 . A . PASS END=93711761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:34:0,93,1395:0,101,255:39,0 chr1 93712395 . G . PASS END=93712511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:46:0,105,1665:0,105,255:40,0 chr1 93720028 . A . PASS END=93720171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:73:0,120,1800:0,189,255:40,2 chr1 93721892 . G . PASS END=93721900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:23,0 chr1 93721901 . G . PASS END=93721901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 93721902 . A . PASS END=93721902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 93721903 . G . PASS END=93721903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 93721904 . C . PASS END=93722061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:27:0,81,994:0,81,255:40,0 chr1 93722062 . A . PASS END=93722062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1166:0,45,255:31,0 chr1 93722063 . C . PASS END=93722069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,94,255:33,0 chr1 93722070 . A . PASS END=93722070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:25,0 chr1 93722071 . T . PASS END=93722071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1078:0,55,255:25,0 chr1 93722072 . A . PASS END=93722072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 93722073 . T . PASS END=93722076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:26,0 chr1 93722077 . G . PASS END=93722080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:31,0 chr1 93722081 . C . PASS END=93722092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,945:0,78,255:26,0 chr1 93722093 . A . PASS END=93722094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 93722095 . A . PASS END=93722095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 93724305 . G . PASS END=93724442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:45:0,111,1665:0,127,255:40,0 chr1 93730258 . A . PASS END=93730512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:84:39:0,84,1369:0,84,255:40,0 chr1 93735904 . G . PASS END=93736512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:90:30:0,90,1133:0,90,255:40,0 chr1 93744020 . G . PASS END=93744034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:104:0,120,1800:0,255,255:40,0 chr1 93812203 . A . PASS END=93812214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr1 93812215 . T . PASS END=93812217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 93812218 . G . PASS END=93812218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:28,0 chr1 93812219 . G . PASS END=93812231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:30,0 chr1 93812232 . T . PASS END=93812232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 93812233 . C . PASS END=93812398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:31:0,83,1143:0,83,255:40,0 chr1 93812399 . T . PASS END=93812399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1083:0,55,255:27,0 chr1 93812400 . C . PASS END=93812419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:31,0 chr1 93812420 . A . PASS END=93812421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 93812422 . G . PASS END=93812422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 93819465 . C . PASS END=93819472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:30:0,82,1111:0,82,255:31,0 chr1 93819473 . A . PASS END=93819473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:30,0 chr1 93819474 . G . PASS END=93819475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1097:0,82,255:33,0 chr1 93819476 . T . PASS END=93819476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr1 93819477 . T . PASS END=93819628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:33:0,99,1147:0,99,255:40,0 chr1 93826050 . G . PASS END=93826052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr1 93826053 . A . PASS END=93826061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 93826062 . C . PASS END=93826062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 93826063 . A . PASS END=93826069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 93826070 . A . PASS END=93826078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 93826079 . A . PASS END=93826085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 93826086 . T . PASS END=93826086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 93826087 . G . PASS END=93826092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 93826093 . A . PASS END=93826093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 93826094 . A . PASS END=93826109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1063:0,84,255:30,0 chr1 93826110 . C . PASS END=93826110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 93826111 . A . PASS END=93826114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 93826115 . A . PASS END=93826115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 93826116 . G . PASS END=93826119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 93826120 . A . PASS END=93826120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 93826121 . G . PASS END=93826148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1156:0,93,255:31,0 chr1 93826149 . A . PASS END=93826171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 93826172 . T . PASS END=93826172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 93826173 . G . PASS END=93826173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 93826174 . A . PASS END=93826191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:16,0 chr1 93826192 . T . PASS END=93826192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 93826193 . C . PASS END=93826196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 93913839 . A . PASS END=93913855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,870:0,61,255:24,0 chr1 93913856 . G . PASS END=93913856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 93913857 . C . PASS END=93913857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 93913858 . T . PASS END=93913858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:20,0 chr1 93913859 . G . PASS END=93913862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 93965025 . G . PASS END=93965032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1316:0,92,255:38,0 chr1 93965033 . C . PASS END=93965033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1296:0,59,255:34,0 chr1 93965034 . G . PASS END=93965140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:38:0,101,1402:0,101,255:40,0 chr1 93987639 . A . PASS END=93987692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,163,255:40,0 chr1 93988901 . G . PASS END=93989048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:40:0,85,1360:0,85,255:40,0 chr1 93989818 . C . PASS END=93989880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,162,255:40,0 chr1 93995209 . A . PASS END=93995313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:59:0,120,1800:0,177,255:40,0 chr1 93996312 . G . PASS END=93996440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:98:38:0,98,1365:0,98,255:40,0 chr1 93998479 . C . PASS END=93998595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:93:32:0,93,1335:0,96,255:40,0 chr1 93998596 . C . PASS END=93998622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:81:74:0,81,1215:0,189,255:40,0 chr1 93998623 . A . PASS END=93998624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:63:72:0,63,945:0,217,255:23,0 chr1 93998625 . A . PASS END=93998625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:54:71:0,54,810:0,213,255:18,0 chr1 94000262 . G . PASS END=94000465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,106,1691:0,106,255:40,0 chr1 94001889 . C . PASS END=94001893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 94001894 . G . PASS END=94002047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:29:0,87,1101:0,87,255:40,0 chr1 94006599 . T . PASS END=94006613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:78:0,120,1800:0,204,255:40,0 chr1 94009664 . G . PASS END=94009773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:96:43:0,96,1440:0,113,255:40,0 chr1 94012399 . A . PASS END=94012531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,109,1800:0,109,255:40,0 chr1 94012904 . G . PASS END=94012998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:44:0,100,1630:0,100,255:40,0 chr1 94014835 . T . PASS END=94014861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1123:0,80,255:39,0 chr1 94014862 . A . PASS END=94014862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr1 94014863 . A . PASS END=94014983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:32:0,81,1196:0,81,255:40,0 chr1 94016504 . G . PASS END=94016512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:31,0 chr1 94016513 . A . PASS END=94016513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 94016514 . A . PASS END=94016515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 94016516 . G . PASS END=94016516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 94016517 . T . PASS END=94016537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1119:0,93,255:40,0 chr1 94016538 . T . PASS END=94016538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1357:0,76,255:37,0 chr1 94016539 . G . PASS END=94016658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:41:0,87,1362:0,87,255:40,0 chr1 94016659 . A . PASS END=94016659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1473:0,79,255:32,0 chr1 94016660 . A . PASS END=94016660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr1 94016661 . A . PASS END=94016661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:72:41:0,72,1110:0,72,255:31,0 chr1 94016662 . G . PASS END=94016669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1260:0,86,255:33,0 chr1 94016670 . A . PASS END=94016670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:25,0 chr1 94016671 . A . PASS END=94016671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1294:0,56,255:26,0 chr1 94016672 . C . PASS END=94016674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,88,255:27,0 chr1 94016675 . A . PASS END=94016682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:27:0,63,1125:0,63,255:26,0 chr1 94017966 . G . PASS END=94017973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,195,255:40,0 chr1 94026410 . G . PASS END=94026472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,179,255:40,1 chr1 94027798 . T . PASS END=94027976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:33:0,88,1205:0,88,255:40,0 chr1 94032836 . C . PASS END=94032843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,604:0,48,255:19,0 chr1 94032844 . A . PASS END=94032856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,729:0,60,255:24,0 chr1 94032857 . T . PASS END=94032857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 94032858 . C . PASS END=94032869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1000:0,72,255:26,0 chr1 94032870 . G . PASS END=94032890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:31,0 chr1 94032891 . T . PASS END=94032891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 94032892 . C . PASS END=94032908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1149:0,91,255:35,0 chr1 94032909 . G . PASS END=94032909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:35,0 chr1 94032910 . T . PASS END=94032943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1355:0,95,255:39,0 chr1 94032944 . C . PASS END=94032944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,971:0,50,255:32,0 chr1 94032945 . C . PASS END=94032949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:34,0 chr1 94032950 . T . PASS END=94032950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:47:38:0,47,1080:0,47,255:30,0 chr1 94032951 . G . PASS END=94032953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1264:0,94,255:36,0 chr1 94032954 . G . PASS END=94032954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:35,0 chr1 94032955 . G . PASS END=94032966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1205:0,94,255:37,0 chr1 94032967 . G . PASS END=94032967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1205:0,67,255:32,0 chr1 94032968 . T . PASS END=94032997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1141:0,80,255:37,0 chr1 94032998 . G . PASS END=94032998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:28,0 chr1 94032999 . C . PASS END=94033001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 94033002 . C . PASS END=94033008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1041:0,76,255:27,0 chr1 94033009 . A . PASS END=94033010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:29:0,52,1024:0,52,255:24,0 chr1 94033011 . T . PASS END=94033015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,65,255:24,0 chr1 94033016 . C . PASS END=94033016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 94033017 . T . PASS END=94033034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,67,255:22,0 chr1 94033035 . A . PASS END=94033047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:32:20:0,32,540:0,32,255:12,0 chr1 94033048 . T . LowGQ END=94033048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,363:16,0,255:11,0 chr1 94033297 . C . PASS END=94033304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 94033305 . T . PASS END=94033305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 94033306 . C . PASS END=94033338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:32:0,88,1083:0,88,255:37,0 chr1 94033339 . T . PASS END=94033339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr1 94033340 . C . PASS END=94033379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:37:0,93,1349:0,107,255:40,0 chr1 94033380 . G . PASS END=94033408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1022:0,68,255:26,0 chr1 94034816 . A . PASS END=94034835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,121,255:40,0 chr1 94034836 . A . PASS END=94034841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,134,255:40,0 chr1 94037227 . C . PASS END=94037244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:26,0 chr1 94037245 . T . PASS END=94037329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:27:0,81,1016:0,81,255:37,0 chr1 94037330 . G . PASS END=94037330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr1 94037331 . C . PASS END=94037332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 94037333 . C . PASS END=94037362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 94037363 . A . PASS END=94037363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 94037364 . T . PASS END=94037380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 94037381 . A . PASS END=94037381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 94037382 . T . PASS END=94037382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 94037383 . G . PASS END=94037383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 94037384 . G . PASS END=94037384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 94037385 . C . PASS END=94037398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:19:0,45,675:0,49,255:18,0 chr1 94041571 . C . PASS END=94041681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:37:0,84,1374:0,84,255:40,0 chr1 94041682 . G . PASS END=94041682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr1 94041683 . C . PASS END=94041686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1380:0,111,255:37,0 chr1 94047858 . C . PASS END=94047865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:19,0 chr1 94047866 . C . PASS END=94047874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:25,0 chr1 94047875 . G . PASS END=94047886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 94047887 . C . PASS END=94047887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 94047888 . G . PASS END=94048012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1004:0,82,255:36,0 chr1 94048013 . T . PASS END=94048013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,91,255:25,0 chr1 94048014 . C . PASS END=94048047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1089:0,93,255:31,0 chr1 94048048 . C . PASS END=94048055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 94048056 . C . PASS END=94048084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr1 94048085 . A . PASS END=94048087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 94048088 . G . PASS END=94048090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 94048091 . T . PASS END=94048114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 94048115 . T . PASS END=94048115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:23,0 chr1 94048116 . C . PASS END=94048122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr1 94048123 . T . PASS END=94048123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,734:0,58,255:22,0 chr1 94048124 . T . PASS END=94048125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 94048126 . A . PASS END=94048160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,659:0,41,255:19,0 chr1 94048161 . C . PASS END=94048162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:17,0 chr1 94048163 . T . PASS END=94048191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:17,0 chr1 94048192 . T . PASS END=94048215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 94048216 . C . PASS END=94048229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 94048230 . T . LowGQ END=94048230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:13,0 chr1 94048231 . G . PASS END=94048246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 94048247 . T . PASS END=94048247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 94048248 . C . PASS END=94048250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 94048251 . T . PASS END=94048251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 94048252 . T . PASS END=94048255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr1 94048256 . A . PASS END=94048256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 94048257 . G . PASS END=94048260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 94048261 . T . PASS END=94048261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 94048262 . T . PASS END=94048269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,652:0,54,255:19,0 chr1 94048270 . G . PASS END=94048273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 94048274 . T . PASS END=94048274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 94048275 . G . PASS END=94048296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,787:0,69,255:25,0 chr1 94048297 . G . PASS END=94048299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 94048300 . A . PASS END=94048322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:70:26:0,70,947:0,70,255:26,0 chr1 94048323 . G . PASS END=94048387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1109:0,83,255:35,0 chr1 94048388 . C . PASS END=94048389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:31,0 chr1 94048390 . T . PASS END=94048392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:31,0 chr1 94048393 . G . PASS END=94048441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1158:0,93,255:33,0 chr1 94048442 . T . PASS END=94048442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 94048443 . C . PASS END=94048451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 94048452 . A . PASS END=94048453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 94048454 . G . PASS END=94048454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 94048455 . T . PASS END=94048456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 94048457 . A . PASS END=94048464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 94048465 . C . PASS END=94048478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:25,0 chr1 94048479 . C . PASS END=94048480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 94048481 . C . PASS END=94048488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 94048489 . G . PASS END=94048489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 94048490 . A . PASS END=94048499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 94048500 . C . PASS END=94048510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 94049575 . C . PASS END=94049678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:40:0,107,1434:0,107,255:40,0 chr1 94054534 . C . PASS END=94054541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr1 94054542 . G . PASS END=94054579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,699:0,60,255:21,0 chr1 94054580 . C . PASS END=94054580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 94054581 . A . PASS END=94054589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 94054590 . G . PASS END=94054590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 94054591 . A . PASS END=94054608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 94054609 . A . PASS END=94054609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 94054610 . C . PASS END=94054621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 94054622 . C . PASS END=94054627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 94054628 . T . PASS END=94054633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 94054634 . T . PASS END=94054637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 94054638 . C . PASS END=94054639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 94054640 . C . PASS END=94054643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 94054644 . G . PASS END=94054646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 94054647 . C . PASS END=94054649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 94054650 . G . PASS END=94054686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:23,0 chr1 94054687 . A . PASS END=94054687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 94054688 . G . PASS END=94054691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 94054692 . C . PASS END=94054692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 94054693 . A . PASS END=94054706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,786:0,66,255:24,0 chr1 94054707 . G . PASS END=94054707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 94054708 . G . PASS END=94054709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 94054710 . C . PASS END=94054740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 94054741 . A . PASS END=94054741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:15,0 chr1 94054742 . T . PASS END=94054742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 94054743 . G . PASS END=94054756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,621:0,41,255:18,0 chr1 94054757 . C . PASS END=94054757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:16,0 chr1 94054758 . C . PASS END=94054769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 94054770 . C . PASS END=94054783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 94054784 . T . PASS END=94054787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 94054788 . G . PASS END=94054788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 94054789 . T . PASS END=94054818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,652:0,41,255:19,0 chr1 94054819 . A . PASS END=94054821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:17:0,38,585:0,38,255:15,0 chr1 94054822 . C . PASS END=94054841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 94054842 . T . PASS END=94054861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,892:0,63,255:23,0 chr1 94054862 . T . PASS END=94054862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 94054863 . T . PASS END=94054883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:25,0 chr1 94054884 . C . PASS END=94054884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 94054885 . T . PASS END=94054910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,915:0,68,255:26,0 chr1 94054911 . C . PASS END=94054911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 94054912 . C . PASS END=94054914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 94054915 . G . PASS END=94054916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 94054917 . G . PASS END=94054917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 94054918 . C . PASS END=94054923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 94054924 . A . PASS END=94054925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 94054926 . A . PASS END=94054943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 94054944 . G . PASS END=94054944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 94054945 . T . PASS END=94054952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 94054953 . T . PASS END=94054953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 94054954 . C . PASS END=94054961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 94054962 . A . PASS END=94054976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:25,0 chr1 94057822 . C . PASS END=94057822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 94057823 . T . PASS END=94057824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 94057825 . T . PASS END=94057825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 94057826 . C . PASS END=94057829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 94057830 . G . PASS END=94057836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,1015:0,48,255:30,1 chr1 94057837 . G . PASS END=94057950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:89:32:0,89,1321:0,89,255:40,0 chr1 94079404 . C . PASS END=94079404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 94079405 . T . PASS END=94079405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 94079406 . T . PASS END=94079407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 94079408 . A . PASS END=94079408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 94079409 . C . PASS END=94079416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1186:0,83,255:32,0 chr1 94079417 . A . PASS END=94079417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 94079418 . A . PASS END=94079430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1152:0,83,255:33,0 chr1 94079431 . A . PASS END=94079431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:32,0 chr1 94079432 . T . PASS END=94079486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:32:0,85,1091:0,85,255:40,0 chr1 94079487 . T . PASS END=94079487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:28,0 chr1 94107860 . C . PASS END=94107899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,175,255:40,0 chr1 94140170 . C . PASS END=94140170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 94140171 . T . PASS END=94140171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 94140172 . G . PASS END=94140172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 94140173 . A . PASS END=94140177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 94140178 . G . PASS END=94140179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 94140180 . A . PASS END=94140188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 94140189 . C . PASS END=94140190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 94140191 . T . PASS END=94140197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,720:0,44,255:19,0 chr1 94140198 . C . PASS END=94140198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 94140199 . C . PASS END=94140199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 94140200 . T . PASS END=94140202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 94140203 . C . PASS END=94140203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 94140204 . A . PASS END=94140217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,848:0,61,255:26,0 chr1 94140218 . A . PASS END=94140220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 94140221 . C . PASS END=94140222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 94140223 . A . PASS END=94140236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 94140237 . G . PASS END=94140237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr1 94140238 . C . PASS END=94140250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:27,0 chr1 94140251 . G . PASS END=94140259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,877:0,64,255:26,0 chr1 94140260 . G . PASS END=94140260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 94140261 . A . PASS END=94140261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:24,0 chr1 94140262 . G . PASS END=94140272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 94140273 . T . PASS END=94140273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 94140274 . G . PASS END=94140290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1058:0,90,255:30,0 chr1 94140291 . C . PASS END=94140291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 94140292 . A . PASS END=94140331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1089:0,83,255:34,0 chr1 94140332 . G . PASS END=94140332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 94140333 . G . PASS END=94140357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,89,255:34,0 chr1 94140358 . T . PASS END=94140358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1170:0,71,255:31,0 chr1 94140359 . T . PASS END=94140449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1148:0,80,255:34,0 chr1 94140450 . T . PASS END=94140486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 94335407 . T . PASS END=94335500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,120,1800:0,144,255:40,0 chr1 94336239 . C . PASS END=94336348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:60:0,120,1800:0,179,255:40,0 chr1 94337628 . C . PASS END=94337792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:54:0,120,1800:0,149,255:40,2 chr1 94338675 . T . PASS END=94338770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:99:54:0,114,1800:0,114,255:40,0 chr1 94341201 . C . PASS END=94341207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1125:0,93,255:31,0 chr1 94341208 . T . PASS END=94341208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 94341209 . T . PASS END=94341229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1163:0,80,255:40,0 chr1 94341230 . T . PASS END=94341266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,120,1800:0,131,255:40,0 chr1 94341267 . A G, 200.03 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,28,0:0,23,0:150:238,153,0,338,338,338:255,153,0:0,0:2.0003e+02,1.5003e+02,0.0000e+00,3.3480e+02,3.6957e+02,3.3781e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,31,20:0,0,24,27 chr1 94341268 . A . PASS END=94341304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,120,1800:0,129,255:40,0 chr1 94341305 . G . PASS END=94341339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:38:0,98,1373:0,98,255:40,0 chr1 94341824 . A . PASS END=94342526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:94:34:0,94,1199:0,94,255:40,0 chr1 94342527 . T . PASS END=94342563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,140,255:40,0 chr1 94342564 . C A, 240.78 PASS DP=65;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,65,0:1.000,0.000:65:0,26,0:0,39,0:191:279,194,0,2379,194,2379:255,198,0:0,0:2.4078e+02,1.9078e+02,0.0000e+00,4.5000e+02,2.2555e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,33:0,0,35,30 chr1 94342565 . T . PASS END=94342601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,169,255:40,0 chr1 94342602 . T . PASS END=94342961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:96:39:0,96,1129:0,96,255:40,0 chr1 94342962 . C . PASS END=94342962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:40,0 chr1 94342963 . T . PASS END=94342985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,122,255:40,0 chr1 94342986 . T . PASS END=94343022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,111,1706:0,111,255:40,0 chr1 94343023 . A G, 188.46 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,12,0:0,35,0:138:226,141,0,1823,141,1823:255,141,0:0,0:1.8846e+02,1.3846e+02,0.0000e+00,4.5000e+02,1.7323e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,29:0,0,23,24 chr1 94343024 . G . PASS END=94343060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,106,1429:0,106,255:40,0 chr1 94343061 . C . PASS END=94343116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1402:0,90,255:38,0 chr1 94343117 . T . PASS END=94343120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr1 94343121 . T . PASS END=94343195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,108,1620:0,109,255:40,0 chr1 94343196 . G . PASS END=94343232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,143,255:40,0 chr1 94343233 . T C, 218.54 PASS DP=57;MQ=249.63;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,25,0:0,32,0:169:256,172,0,2175,172,2175:255,171,0:0,0:2.1854e+02,1.6854e+02,0.0000e+00,4.5000e+02,2.0331e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,24:0,0,27,30 chr1 94343234 . T . PASS END=94343270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:56:0,120,1800:0,140,255:40,0 chr1 94343271 . A . PASS END=94343421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:30:0,84,1260:0,90,255:40,0 chr1 94343422 . C . PASS END=94343423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:27,0 chr1 94343424 . A . PASS END=94343427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 94343428 . A . PASS END=94343428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 94343429 . G . PASS END=94343429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 94343430 . A . PASS END=94343430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 94343431 . G . PASS END=94343433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 94344633 . C . PASS END=94344678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1350:0,98,255:38,0 chr1 94344679 . G . PASS END=94344693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:32,0 chr1 94344694 . G . PASS END=94344694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 94344695 . T . PASS END=94344695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 94344696 . A . PASS END=94344704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:26,0 chr1 94354546 . T . PASS END=94354551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1127:0,90,255:31,0 chr1 94354552 . A . PASS END=94354552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr1 94354553 . C . PASS END=94354664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,1116:0,82,255:40,0 chr1 94354665 . C . PASS END=94354665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr1 94354666 . A . PASS END=94354669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1082:0,82,255:31,0 chr1 94354670 . A . PASS END=94354670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:38:33:0,38,1056:0,38,255:29,0 chr1 94354671 . T . PASS END=94354672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 94354673 . C . PASS END=94354673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 94354674 . T . PASS END=94354677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 94354678 . C . PASS END=94354679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 94354680 . G . PASS END=94354680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1045:0,38,255:27,0 chr1 94354681 . A . PASS END=94354681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 94354682 . A . PASS END=94354684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:28,0 chr1 94354685 . G . PASS END=94354685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:27,0 chr1 94354686 . C . PASS END=94354697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,844:0,70,255:26,0 chr1 94354698 . T . PASS END=94354698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 94354699 . T . PASS END=94354703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:25,0 chr1 94354704 . C . PASS END=94354704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 94354705 . A . PASS END=94354705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:24,0 chr1 94354706 . G . PASS END=94354706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:24,0 chr1 94354707 . A . PASS END=94354710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,945:0,65,255:26,0 chr1 94354711 . C . PASS END=94354711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,894:0,50,255:23,0 chr1 94354712 . A . PASS END=94354712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,862:0,61,255:23,0 chr1 94354713 . G . PASS END=94354713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,856:0,47,255:23,0 chr1 94354714 . T . PASS END=94354714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 94354715 . T . PASS END=94354715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:46:26:0,46,637:0,46,255:23,0 chr1 94360170 . C . PASS END=94360284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:35:0,84,1260:0,99,255:40,0 chr1 94362174 . C . PASS END=94362341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:32:0,87,1178:0,96,255:40,0 chr1 94362342 . A . PASS END=94362356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,84,255:25,0 chr1 94362357 . A . PASS END=94362372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:19,0 chr1 94362373 . C . PASS END=94362376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 94363395 . C . PASS END=94363454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:102:0,120,1800:0,255,255:40,0 chr1 94367141 . C . PASS END=94367225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:88:42:0,88,1507:0,88,255:40,0 chr1 94370079 . C . PASS END=94370144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:80:0,120,1800:0,204,255:40,0 chr1 94374594 . C . PASS END=94374604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 94374605 . G . PASS END=94374609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 94374610 . G . PASS END=94374617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 94374618 . C . PASS END=94374635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 94374636 . C . PASS END=94374667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr1 94374668 . G . PASS END=94374687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,54,255:17,0 chr1 94374688 . A . PASS END=94374688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 94374689 . G . PASS END=94374694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 94374695 . T . PASS END=94374696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 94374697 . G . PASS END=94374700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 94374701 . C . PASS END=94374708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 94374709 . T . PASS END=94374709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:9,0 chr1 94374710 . C . PASS END=94374711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 94374712 . G . PASS END=94374719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:12:10:0,12,180:0,30,255:4,0 chr1 94458494 . C . PASS END=94458494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 94458509 . A . PASS END=94458509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 94458539 . G . PASS END=94458539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 94458565 . T . PASS END=94458565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 94458646 . G . PASS END=94458646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1512:0,110,255:37,0 chr1 94458657 . C . PASS END=94458657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 94458770 . G . PASS END=94458770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 94458783 . G . PASS END=94458783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 94458793 . T . PASS END=94458798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,102,1530:0,123,255:36,0 chr1 94458800 . T . PASS END=94458800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 94461659 . G . PASS END=94461659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 94461663 . A . PASS END=94461710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1194:0,83,255:35,0 chr1 94461711 . T . PASS END=94461711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:32,0 chr1 94461712 . C . PASS END=94461751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1175:0,86,255:34,0 chr1 94461770 . C . PASS END=94461770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 94463417 . C . PASS END=94463420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr1 94463421 . T . PASS END=94463421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 94463422 . C . PASS END=94463422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 94463423 . C . PASS END=94463423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 94463424 . A . PASS END=94463427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,906:0,62,255:25,0 chr1 94463428 . T . PASS END=94463428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 94463429 . G . PASS END=94463431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,902:0,75,255:26,0 chr1 94463432 . C . PASS END=94463434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:31,0 chr1 94463435 . T . PASS END=94463435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 94463436 . G . PASS END=94463436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr1 94463437 . T . PASS END=94463437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 94463438 . G . PASS END=94463656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:31:0,87,1194:0,91,255:40,2 chr1 94463657 . A . PASS END=94463657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:28,0 chr1 94463658 . T . PASS END=94463666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:30,0 chr1 94466392 . T . PASS END=94466484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:30:0,90,1042:0,90,255:40,0 chr1 94466556 . G . PASS END=94466656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1215:0,86,255:40,0 chr1 94466657 . T . PASS END=94466663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,84,255:23,0 chr1 94466668 . G . PASS END=94466668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 94467405 . C . PASS END=94467405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 94467414 . C . PASS END=94467540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:34:0,87,1305:0,97,255:40,0 chr1 94467541 . T . PASS END=94467542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 94467543 . T . PASS END=94467544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 94467545 . C . PASS END=94467548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 94470989 . T . PASS END=94470989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 94470995 . A . PASS END=94470995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 94470997 . C . PASS END=94471037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,131,255:40,0 chr1 94471038 . A . PASS END=94471074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,199,255:40,0 chr1 94471075 . A G, 281.29 PASS DP=78;MQ=249.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,78,0:1.000,0.000:78:0,37,0:0,41,0:231:319,234,0,2963,234,2963:255,235,0:0,0:2.8129e+02,2.3129e+02,0.0000e+00,4.5000e+02,2.6606e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,39,39:0,0,40,38 chr1 94471076 . A . PASS END=94471112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,195,255:40,0 chr1 94471113 . G . PASS END=94471138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,122,255:40,0 chr1 94473188 . A . PASS END=94473297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:96:35:0,96,1429:0,105,255:40,0 chr1 94473785 . A . PASS END=94473785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 94473790 . C . PASS END=94473853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,138,255:40,0 chr1 94473856 . G . PASS END=94473856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 94473860 . G . PASS END=94473860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr1 94474307 . C . PASS END=94474427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:98:37:0,98,1410:0,98,255:40,0 chr1 94476351 . C . PASS END=94476351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 94476352 . G . PASS END=94476352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 94476355 . C . PASS END=94476379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:24,0 chr1 94476380 . T . PASS END=94476380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 94476381 . G . PASS END=94476387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 94476388 . C G, 49.66 PASS DP=26;MQ=250.00;MQRankSum=4.295;ReadPosRankSum=2.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:8,4,0:6,8,0:48:84,0,50,421,501,922:255,0,255:14,0:4.9662e+01,6.8598e-05,5.3000e+01,4.2105e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,10,2:9,5,4,8 chr1 94476389 . A . PASS END=94476397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,963:0,68,255:26,0 chr1 94476398 . A . PASS END=94476466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,980:0,80,255:36,0 chr1 94476467 . T A, 50.00 PASS DP=31;MQ=249.97;MQRankSum=4.664;ReadPosRankSum=3.022;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,18,0:0.581,0.000:31:8,5,0:5,13,0:48:85,0,48,644,457,1100:255,0,255:12,0:5.0000e+01,7.6105e-05,5.1238e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,3,6,12:9,4,7,11 chr1 94476468 . T . PASS END=94476474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 94476475 . G . PASS END=94476485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:25,0 chr1 94476812 . A . PASS END=94476812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 94476818 . C . PASS END=94476843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,748:0,66,255:26,0 chr1 94476844 . G . PASS END=94476845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 94476846 . C . PASS END=94476847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 94476848 . G . PASS END=94476888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1215:0,83,255:35,0 chr1 94476889 . T . PASS END=94476889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr1 94476890 . G . PASS END=94476920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,92,255:38,0 chr1 94476921 . G . PASS END=94476922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 94476923 . C . PASS END=94476923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 94476924 . G . PASS END=94476941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,978:0,67,255:26,0 chr1 94476951 . A . PASS END=94476951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 94480093 . G . PASS END=94480093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1413:0,114,255:38,0 chr1 94480096 . C . PASS END=94480096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1496:0,120,255:40,0 chr1 94480098 . C . PASS END=94480246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:41:0,93,1513:0,93,255:40,0 chr1 94480248 . T . PASS END=94480248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 94481284 . A . PASS END=94481284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 94481287 . C . PASS END=94481287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1258:0,105,255:35,0 chr1 94481292 . T . PASS END=94481410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:84:37:0,84,1319:0,84,255:40,0 chr1 94481414 . G . PASS END=94481414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:35,0 chr1 94484001 . C . PASS END=94484002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 94484082 . T . PASS END=94484082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 94484125 . T . PASS END=94484125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1186:0,86,255:29,0 chr1 94485131 . C . PASS END=94485131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 94485136 . A . PASS END=94485141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 94485142 . T . PASS END=94485142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 94485143 . C . PASS END=94485146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr1 94485147 . G . PASS END=94485148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 94485149 . G . PASS END=94485150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 94485151 . A . PASS END=94485151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 94485152 . A . PASS END=94485160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 94485161 . C . PASS END=94485180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:30:0,82,1117:0,82,255:40,0 chr1 94485181 . A . PASS END=94485181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1396:0,73,255:38,0 chr1 94485182 . C . PASS END=94485310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1215:0,94,255:40,0 chr1 94485311 . T . PASS END=94485315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:31:0,68,1080:0,68,255:26,0 chr1 94486791 . C . PASS END=94486791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 94486794 . A . PASS END=94486794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 94486796 . A . PASS END=94486828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:26,0 chr1 94486829 . T . PASS END=94486930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,986:0,81,255:34,0 chr1 94486931 . A . PASS END=94486934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 94486935 . G . PASS END=94486938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 94486939 . A . PASS END=94486939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 94486940 . T . PASS END=94486944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 94486945 . G . PASS END=94486945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 94486946 . C . PASS END=94486947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 94486948 . T . PASS END=94486948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:26,0 chr1 94486949 . T . PASS END=94486956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr1 94486957 . A . PASS END=94486962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 94486963 . C . PASS END=94486966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 94487183 . A . PASS END=94487183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 94487192 . G . PASS END=94487192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 94487194 . A . PASS END=94487239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,148,255:40,0 chr1 94487240 . T . PASS END=94487270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:84:59:0,84,1260:0,97,255:40,0 chr1 94487272 . T . PASS END=94487272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:87:59:0,87,1305:0,161,255:28,0 chr1 94487399 . T . PASS END=94487399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 94487402 . C . PASS END=94487507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,144,255:40,0 chr1 94487509 . T . PASS END=94487509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 94487522 . G . PASS END=94487522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 94488941 . C . PASS END=94488974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:86:0,120,1800:0,242,255:40,0 chr1 94490508 . A . PASS END=94490508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1390:0,114,255:38,0 chr1 94490510 . C . PASS END=94490604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:37:0,86,1266:0,86,255:40,0 chr1 94490606 . T . PASS END=94490606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:41:0,96,1440:0,123,255:32,0 chr1 94490609 . G . PASS END=94490609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 94492640 . G . PASS END=94492640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 94492917 . G . PASS END=94492917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 94492935 . G . PASS END=94492935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 94492937 . G . PASS END=94492937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 94492973 . G . PASS END=94492973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 94493000 . C . PASS END=94493000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr1 94493001 . C . PASS END=94493001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 94495000 . C . PASS END=94495001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 94495002 . T . PASS END=94495002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 94495003 . G . PASS END=94495004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 94495005 . G . PASS END=94495005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 94495006 . G . PASS END=94495172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:30:0,83,1202:0,83,255:40,0 chr1 94495173 . C . PASS END=94495183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:29:0,60,900:0,87,255:26,0 chr1 94495184 . C . PASS END=94495187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:24:0,54,810:0,72,255:18,0 chr1 94495191 . A . PASS END=94495191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 94495969 . C . PASS END=94495971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:34,0 chr1 94495979 . C . PASS END=94495979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1312:0,105,255:35,0 chr1 94495983 . C . PASS END=94496083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:38:0,81,1332:0,81,255:40,0 chr1 94496087 . A . PASS END=94496087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 94496509 . C . PASS END=94496509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 94496546 . G . PASS END=94496548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,122,255:40,0 chr1 94496552 . C . PASS END=94496564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,140,255:40,0 chr1 94496565 . A . PASS END=94496601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:56:0,120,1800:0,136,255:40,0 chr1 94496602 . G T, 49.72 PASS DP=71;MQ=249.65;MQRankSum=7.177;ReadPosRankSum=4.718;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,33,0:0.471,0.000:70:15,16,0:22,17,0:48:84,0,50,1180,1315,2495:255,0,255:36,0:4.9718e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,12,10,23:21,16,15,18 chr1 94496603 . G . PASS END=94496639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,164,255:40,0 chr1 94496640 . T . PASS END=94496677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,143,255:40,0 chr1 94497322 . C . PASS END=94497323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 94497326 . A . PASS END=94497326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 94497334 . C . PASS END=94497337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:17,0 chr1 94497338 . G . PASS END=94497338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 94497339 . C . PASS END=94497347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:19,0 chr1 94497348 . C . PASS END=94497351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 94497352 . G . PASS END=94497354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 94497355 . G . PASS END=94497444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,884:0,66,255:26,0 chr1 94497445 . G . PASS END=94497466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,53,255:19,0 chr1 94497467 . T . PASS END=94497473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 94497474 . C . PASS END=94497483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 94497484 . A . PASS END=94497505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 94497506 . A . PASS END=94497509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 94497510 . T . PASS END=94497511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,574:0,34,255:13,0 chr1 94497512 . G . PASS END=94497512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 94497513 . A . PASS END=94497513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 94497514 . G . PASS END=94497524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 94497525 . T . PASS END=94497526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 94497527 . T . PASS END=94497527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr1 94497528 . G . PASS END=94497540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr1 94497541 . T . PASS END=94497541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 94497542 . C . PASS END=94497553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:10,0 chr1 94497554 . C . PASS END=94497599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,250:0,24,250:9,0 chr1 94502295 . C . PASS END=94502344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:40:0,87,1283:0,87,255:40,0 chr1 94502694 . A . PASS END=94502694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 94502701 . C . PASS END=94502703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:9,0 chr1 94502704 . T . PASS END=94502729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:12,0 chr1 94502730 . A . PASS END=94502751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:17,0 chr1 94502752 . C . PASS END=94502752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 94502753 . A . PASS END=94502758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,644:0,54,255:19,0 chr1 94502759 . T . PASS END=94502769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 94502770 . T . PASS END=94502770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 94502771 . C . PASS END=94502773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr1 94502774 . A . PASS END=94502774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 94502775 . A . PASS END=94502783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr1 94502784 . C . PASS END=94502792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 94502793 . T . PASS END=94502793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 94502794 . G . PASS END=94502799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 94502800 . G . PASS END=94502800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 94502801 . A . PASS END=94502805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 94502806 . C . PASS END=94502806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 94502807 . T . PASS END=94502808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 94502809 . A . PASS END=94502809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:25,0 chr1 94502810 . T . PASS END=94502810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 94502811 . T . PASS END=94502811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:27,0 chr1 94502812 . T . PASS END=94502814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:29,0 chr1 94502815 . A . PASS END=94502815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 94502816 . A . PASS END=94502883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1078:0,86,255:35,0 chr1 94502884 . A . PASS END=94502884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 94502885 . T . PASS END=94502887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 94502888 . A . PASS END=94502888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 94502889 . T . PASS END=94502896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 94502897 . T . PASS END=94502906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,71,255:26,0 chr1 94505586 . G . PASS END=94505586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 94505598 . C . PASS END=94505637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,679:0,60,255:24,0 chr1 94505638 . C . PASS END=94505638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 94505639 . T . PASS END=94505670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 94505671 . A . PASS END=94505683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,706:0,57,255:19,0 chr1 94505685 . T . PASS END=94505685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 94505689 . A . PASS END=94505689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 94505692 . G . PASS END=94505692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:16,0 chr1 94506759 . A . PASS END=94506759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 94506765 . C . PASS END=94506779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 94506780 . T . PASS END=94506780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 94506781 . T . PASS END=94506959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:31:0,90,1164:0,90,255:40,0 chr1 94506969 . G . PASS END=94506969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 94508312 . G . PASS END=94508312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 94508317 . C . PASS END=94508440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,969:0,80,255:40,0 chr1 94508441 . T . PASS END=94508441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1265:0,73,255:36,0 chr1 94508442 . C . PASS END=94508454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1360:0,100,255:39,0 chr1 94508892 . C . PASS END=94508997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:38,0 chr1 94508998 . G . PASS END=94509004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,83,255:26,0 chr1 94509005 . A . PASS END=94509022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:28,0 chr1 94509023 . A . PASS END=94509030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 94509031 . G . PASS END=94509031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 94509046 . C . PASS END=94509046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr1 94510164 . C . PASS END=94510164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 94510168 . C . PASS END=94510168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,953:0,40,255:27,0 chr1 94510169 . T . PASS END=94510171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:30,0 chr1 94510172 . T . PASS END=94510173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 94510174 . G . PASS END=94510184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:32:0,85,1166:0,85,255:34,0 chr1 94510185 . T . PASS END=94510185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:32,0 chr1 94510186 . G . PASS END=94510300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1258:0,91,255:40,0 chr1 94510310 . A . PASS END=94510310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 94511278 . T . PASS END=94511285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 94511286 . G . PASS END=94511286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 94511287 . C . PASS END=94511306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1103:0,90,255:32,0 chr1 94511307 . C . PASS END=94511307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 94511308 . A . PASS END=94511316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr1 94511317 . C . PASS END=94511317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:30,0 chr1 94511318 . G . PASS END=94511321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:32,0 chr1 94511322 . T . PASS END=94511322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 94511323 . A . PASS END=94511328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:33,0 chr1 94511329 . C . PASS END=94511332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:69:36:0,69,1280:0,69,255:34,0 chr1 94511333 . C . PASS END=94511335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:34,0 chr1 94511336 . T . PASS END=94511336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:33,0 chr1 94511337 . C . PASS END=94511495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1255:0,84,255:40,0 chr1 94511496 . T . PASS END=94511521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr1 94512475 . A . PASS END=94512475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr1 94512476 . A . PASS END=94512618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:31:0,84,1125:0,88,255:40,0 chr1 94512619 . C . PASS END=94512642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,922:0,62,255:26,0 chr1 94512643 . A . PASS END=94512643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 94512644 . A . PASS END=94512648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:23,0 chr1 94512649 . T . PASS END=94512649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 94512654 . G . PASS END=94512654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 94514412 . T . PASS END=94514413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,120,1800:0,123,255:40,0 chr1 94514424 . C . PASS END=94514513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,156,255:40,0 chr1 94514519 . C . PASS END=94514519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 94514521 . A . PASS END=94514521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 94517189 . C . PASS END=94517254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,150,255:40,0 chr1 94517259 . A . PASS END=94517259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 94517266 . G . PASS END=94517266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 94520665 . A . PASS END=94520665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 94520667 . C . PASS END=94520678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,852:0,69,255:26,0 chr1 94520679 . G . PASS END=94520830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:29:0,87,1027:0,87,255:40,0 chr1 94520831 . T . PASS END=94520831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:34,0 chr1 94520832 . A . PASS END=94520871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1250:0,91,255:36,0 chr1 94520883 . C . PASS END=94520883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 94522156 . C . PASS END=94522379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:34:0,92,1310:0,92,255:40,0 chr1 94522384 . A . PASS END=94522384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 94522386 . C . PASS END=94522386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 94526092 . C . PASS END=94526092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 94526093 . C . PASS END=94526093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 94526094 . A . PASS END=94526094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 94526095 . T . PASS END=94526095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 94526096 . G . PASS END=94526098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 94526099 . G . PASS END=94526109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 94526110 . G . PASS END=94526110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 94526111 . G . PASS END=94526111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 94526112 . A . PASS END=94526113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 94526114 . G . PASS END=94526115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 94526116 . A . PASS END=94526133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:26,0 chr1 94526134 . T . PASS END=94526265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,932:0,81,255:40,0 chr1 94526266 . A . PASS END=94526268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1309:0,72,255:35,0 chr1 94526269 . C . PASS END=94526294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:30:0,83,1148:0,83,255:35,0 chr1 94526295 . C . PASS END=94526316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:22:0,63,945:0,66,255:23,0 chr1 94528118 . G . PASS END=94528118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 94528128 . C . PASS END=94528128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1233:0,96,255:32,0 chr1 94528132 . C . PASS END=94528136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1140:0,83,255:33,0 chr1 94528137 . C . PASS END=94528137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1102:0,44,255:31,0 chr1 94528138 . G . PASS END=94528303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:32:0,83,1164:0,83,255:40,0 chr1 94528304 . C . PASS END=94528309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:26,0 chr1 94528666 . A . PASS END=94528666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 94528668 . C . PASS END=94528873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:31:0,87,1149:0,87,255:40,0 chr1 94528877 . C . PASS END=94528877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:39:0,93,1395:0,101,255:30,0 chr1 94543246 . C . PASS END=94543250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,472:0,39,255:13,0 chr1 94543251 . G . PASS END=94543252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 94543253 . T . PASS END=94543253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 94543254 . A . PASS END=94543265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 94543266 . G . PASS END=94543267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 94543268 . C . PASS END=94543268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 94543269 . G . PASS END=94543283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:23,0 chr1 94543284 . T . PASS END=94543284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 94543285 . G . PASS END=94543295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:26,0 chr1 94543296 . T . PASS END=94543314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 94543315 . G . PASS END=94543315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,1000:0,40,255:27,0 chr1 94543316 . G . PASS END=94543377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1013:0,83,255:35,0 chr1 94543378 . A . PASS END=94543379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 94543380 . T . PASS END=94543387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 94543388 . T . PASS END=94543412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,876:0,61,255:26,0 chr1 94543413 . A . PASS END=94543415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 94543416 . C . PASS END=94543418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,71,255:22,0 chr1 94543419 . T . PASS END=94543419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 94543420 . T . PASS END=94543431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 94543432 . C . PASS END=94543443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:17,0 chr1 94543445 . T . PASS END=94543445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 94544131 . T . LowGQ END=94544131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:23,3:26:0:26:0,0,0:0,6,255:0,1 chr1 94544139 . C . PASS END=94544141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1421:0,81,255:36,0 chr1 94544146 . T . PASS END=94544146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:23:42:0,23,1288:0,23,255:37,0 chr1 94544147 . C . PASS END=94544147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:63:43:0,63,1416:0,63,255:39,0 chr1 94544148 . T . PASS END=94544148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:26:43:0,26,1319:0,26,255:39,0 chr1 94544149 . G . PASS END=94544149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1463:0,65,255:39,0 chr1 94544150 . A . PASS END=94544150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:32:42:0,32,1335:0,32,255:39,0 chr1 94544151 . T . PASS END=94544151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:39,0 chr1 94544152 . C . PASS END=94544152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1402:0,54,255:38,0 chr1 94544153 . A . PASS END=94544153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:33:47:0,33,1478:0,33,255:40,0 chr1 94544154 . T . PASS END=94544154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:50:48:0,50,1509:0,50,255:40,0 chr1 94544155 . G . PASS END=94544168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:82:51:0,82,1634:0,82,255:40,0 chr1 94544169 . T . PASS END=94544169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:74:56:0,74,1878:0,74,255:40,0 chr1 94544170 . G . PASS END=94544178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:57:0,119,1800:0,119,255:40,0 chr1 94544179 . G . PASS END=94544196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:58:0,106,1800:0,106,255:40,0 chr1 94544197 . C . PASS END=94544233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:65:0,120,1800:0,160,255:40,0 chr1 94544234 . T C, 50.00 PASS DP=62;MQ=249.89;MQRankSum=6.642;ReadPosRankSum=-0.843;FractionInformativeReads=0.968;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,31,0:0.517,0.000:60:13,10,0:16,21,0:48:85,0,50,1039,1000,2039:255,0,255:24,0:5.0000e+01,6.5492e-05,5.2928e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,14,17:14,15,17,14 chr1 94544235 . G . PASS END=94544262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,126,255:40,0 chr1 94544270 . C . PASS END=94544270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 94544877 . C . PASS END=94544882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 94544883 . T . PASS END=94544883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 94544884 . C . PASS END=94544884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 94544885 . A . PASS END=94544987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1062:0,84,255:38,0 chr1 94544988 . G . PASS END=94544989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 94544990 . C . PASS END=94544991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr1 94544992 . C . PASS END=94545004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:26,0 chr1 94545005 . T . PASS END=94545017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,765:0,50,255:19,0 chr1 94545019 . T . PASS END=94545020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 94546022 . C . PASS END=94546022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 94546031 . T . PASS END=94546031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 94546034 . T . PASS END=94546034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 94546035 . T . PASS END=94546036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr1 94546037 . T . PASS END=94546037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr1 94546038 . T . PASS END=94546054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:25,0 chr1 94546055 . A . PASS END=94546057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr1 94546058 . T . PASS END=94546058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 94546059 . A . PASS END=94546059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 94546060 . G . PASS END=94546060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 94546061 . G . PASS END=94546088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1139:0,80,255:33,0 chr1 94546089 . A . PASS END=94546089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:31,0 chr1 94546090 . A . PASS END=94546155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:34:0,99,1352:0,102,255:40,0 chr1 94546156 . T . PASS END=94546156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr1 94546157 . A . PASS END=94546192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:33:0,81,1133:0,81,255:37,0 chr1 94546193 . T . PASS END=94546211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:29:0,74,1100:0,74,255:26,0 chr1 94546212 . A . PASS END=94546212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 94546213 . C . PASS END=94546238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 94546239 . C . PASS END=94546244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 94546245 . C . PASS END=94546245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 94546246 . A . PASS END=94546265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:15,0 chr1 94546266 . A . PASS END=94546268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 94546269 . G . PASS END=94546270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 94546271 . T . PASS END=94546274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 94546283 . A . PASS END=94546283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 94546286 . C . PASS END=94546286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 94548908 . C . PASS END=94548991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:43:0,120,1800:0,129,255:40,0 chr1 94548992 . G . PASS END=94548997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,105,1575:0,123,255:40,0 chr1 94549000 . G . PASS END=94549000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 94564008 . T . PASS END=94564008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 94564350 . C . PASS END=94564520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1143:0,83,255:40,0 chr1 94564521 . C . PASS END=94564521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:25,0 chr1 94564522 . G . PASS END=94564522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 94564523 . C . PASS END=94564529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1092:0,74,255:26,0 chr1 94564530 . C . PASS END=94564531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 94564532 . G . PASS END=94564534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 94564535 . C . PASS END=94564535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr1 94564536 . T . PASS END=94564546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr1 94564547 . A . PASS END=94564547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 94564548 . C . PASS END=94564550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 94566773 . T . PASS END=94566773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1218:0,91,255:35,0 chr1 94568564 . C . PASS END=94568564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1473:0,114,255:38,0 chr1 94568571 . C . PASS END=94568698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,104,1421:0,104,255:40,0 chr1 94574127 . G . PASS END=94574127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1357:0,108,255:36,0 chr1 94574133 . C . PASS END=94574261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1215:0,86,255:40,0 chr1 94574262 . C . PASS END=94574263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 94574264 . C . PASS END=94574269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:28,0 chr1 94574270 . A . PASS END=94574272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 94574275 . G . PASS END=94574275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 94576926 . G . PASS END=94576926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 94576988 . A . PASS END=94576988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:28,0 chr1 94576990 . T . PASS END=94576990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 94576993 . C . PASS END=94577135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1159:0,87,255:40,0 chr1 94578524 . C . PASS END=94578524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 94578527 . A . PASS END=94578527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 94578529 . A . PASS END=94578547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,107,1300:0,107,255:40,0 chr1 94578548 . T C, 197.03 PASS DP=51;MQ=248.68;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,18,0:0,32,0:147:235,150,0,1901,150,1901:255,150,0:0,0:1.9703e+02,1.4703e+02,0.0000e+00,4.5000e+02,1.8180e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,22:0,0,28,22 chr1 94578549 . G . PASS END=94578585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,150,255:40,0 chr1 94578586 . A . PASS END=94578624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,117,1755:0,129,255:40,0 chr1 94586534 . A . PASS END=94586534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:59:0,120,1800:0,122,255:40,0 chr1 94586536 . C . PASS END=94586601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:58:0,120,1800:0,122,255:40,0 chr1 94620148 . T . PASS END=94620150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 94620151 . G . PASS END=94620151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 94620152 . C . PASS END=94620153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 94620154 . G . PASS END=94620154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 94620155 . C . PASS END=94620155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 94620156 . A . PASS END=94620164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 94620165 . A . PASS END=94620165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:29,0 chr1 94620166 . T . PASS END=94620181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr1 94620182 . C . PASS END=94620183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 94620184 . G . PASS END=94620194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 94620195 . T . PASS END=94620195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 94620196 . T . PASS END=94620202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 94620203 . T . PASS END=94620203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 94620204 . C . PASS END=94620204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 94639425 . C . PASS END=94639444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1037:0,85,255:35,0 chr1 94639445 . C . PASS END=94639445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 94639446 . A . PASS END=94639446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:34,0 chr1 94639447 . C T, 154.88 PASS DP=36;MQ=248.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,17,0:0,19,0:105:193,108,0,1331,108,1331:255,108,0:0,0:1.5488e+02,1.0488e+02,0.0000e+00,4.5000e+02,1.3965e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,11:0,0,20,16 chr1 94639448 . C . PASS END=94639448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1299:0,108,255:36,0 chr1 94639449 . T . PASS END=94639449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1154:0,69,255:35,0 chr1 94639450 . T . PASS END=94639484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:36:0,95,1289:0,95,255:40,0 chr1 94639485 . T . PASS END=94639600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1172:0,83,255:40,0 chr1 94639601 . T . PASS END=94639606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:36:0,72,1080:0,108,255:26,0 chr1 94639607 . C . PASS END=94639891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1215:0,86,255:40,0 chr1 94639892 . C . PASS END=94639892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:41:46:0,41,1297:0,41,255:39,0 chr1 94639893 . T . PASS END=94640002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:40:0,84,1412:0,84,255:40,0 chr1 94640003 . T . PASS END=94640003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1404:0,68,255:34,0 chr1 94640004 . A . PASS END=94640077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1149:0,82,255:40,0 chr1 94640078 . C . PASS END=94640079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 94640080 . A . PASS END=94640086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 94640087 . C . PASS END=94640088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 94640089 . T . PASS END=94640094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 94640095 . A . PASS END=94640097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:28,0 chr1 94640098 . T . PASS END=94640104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 94640105 . C . PASS END=94640105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 94640106 . A . PASS END=94640106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 94640107 . T . PASS END=94640107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr1 94640108 . T . PASS END=94640108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr1 94640109 . T . PASS END=94640109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,913:0,70,255:28,0 chr1 94640110 . C . PASS END=94640110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 94640111 . T . PASS END=94640111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 94640112 . C . PASS END=94640125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1109:0,87,255:30,0 chr1 94640126 . T . PASS END=94640126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 94640127 . T . PASS END=94640140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1094:0,83,255:31,0 chr1 94640141 . T . PASS END=94640141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,959:0,65,255:28,0 chr1 94640142 . A . PASS END=94640215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1127:0,85,255:40,0 chr1 94640216 . A . PASS END=94640216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 94640217 . T . PASS END=94640269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1194:0,83,255:38,0 chr1 94640270 . A . PASS END=94640270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 94640271 . T . PASS END=94640272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 94640273 . C . PASS END=94640278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 94640279 . C . PASS END=94640279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr1 94640280 . T . PASS END=94640302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,901:0,64,255:25,0 chr1 94640303 . T . PASS END=94640303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:21,0 chr1 94640304 . G . PASS END=94640305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 94643168 . C . PASS END=94643194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:61:0,120,1800:0,179,255:40,0 chr1 94643195 . A . PASS END=94643276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:47:0,117,1755:0,136,255:40,0 chr1 94643408 . T . PASS END=94643493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,104,1471:0,104,255:40,0 chr1 94643494 . G . PASS END=94643530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,111,1651:0,119,255:40,0 chr1 94643531 . T C, 48.31 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=3.202;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:9,12,0:19,9,0:47:83,0,50,742,957,1698:255,0,255:25,0:4.8309e+01,8.5942e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,13,7,14:14,14,8,13 chr1 94643532 . T . PASS END=94643568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,107,1482:0,107,255:40,0 chr1 94643569 . T . PASS END=94643690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:36:0,88,1218:0,88,255:40,0 chr1 94643691 . T . PASS END=94643691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1175:0,72,255:34,0 chr1 94643692 . T . PASS END=94643713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1133:0,80,255:35,0 chr1 94643714 . A . PASS END=94643723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:28:0,63,945:0,84,255:25,0 chr1 94645281 . C . PASS END=94645513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:84:31:0,84,1260:0,93,255:40,0 chr1 94649707 . C . PASS END=94649844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,114,1612:0,116,255:40,0 chr1 94650427 . C . PASS END=94650616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:52:0,120,1800:0,140,255:40,2 chr1 94650897 . C . PASS END=94651037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:49:0,111,1665:0,122,255:40,0 chr1 94652055 . C . PASS END=94652126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,140,255:40,0 chr1 94652127 . T . PASS END=94652127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1670:0,73,255:40,0 chr1 94652128 . T . PASS END=94652153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:38:0,87,1305:0,98,255:40,0 chr1 94654393 . C . PASS END=94654497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,108,1582:0,113,255:40,0 chr1 94654772 . C . PASS END=94654908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:98:40:0,98,1512:0,98,255:40,0 chr1 94655482 . C . PASS END=94655491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,740:0,60,255:22,0 chr1 94655492 . T . PASS END=94655492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 94655493 . T . PASS END=94655521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,756:0,69,255:26,0 chr1 94655522 . C . PASS END=94655522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 94655523 . A . PASS END=94655523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 94655524 . A . PASS END=94655525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 94655526 . T . PASS END=94655527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,945:0,65,255:27,0 chr1 94655528 . C . PASS END=94655538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1033:0,84,255:34,0 chr1 94655539 . T . PASS END=94655539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 94655540 . G . PASS END=94655621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,81,255:38,0 chr1 94655622 . G . PASS END=94655631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,93,255:26,0 chr1 94655632 . A . PASS END=94655632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 94655633 . C . PASS END=94655639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 94667276 . A . PASS END=94667387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:50:0,110,1800:0,110,255:40,0 chr1 94667388 . T . PASS END=94667410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:84:69:0,84,1260:0,177,255:40,0 chr1 94667411 . T . PASS END=94667413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:63:71:0,63,945:0,213,255:25,0 chr1 94668061 . C . PASS END=94668083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:59:0,92,1800:0,92,255:40,0 chr1 94668084 . A . PASS END=94668242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:83:49:0,83,1800:0,83,255:40,0 chr1 94668243 . G . PASS END=94668243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:53:49:0,53,1657:0,53,255:40,0 chr1 94668244 . C . PASS END=94668288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:43:0,89,1604:0,89,255:40,0 chr1 94668474 . C . PASS END=94668554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:94:0,120,1800:0,255,255:40,0 chr1 94668656 . C . PASS END=94668763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:83:33:0,83,1156:0,83,255:40,0 chr1 94668764 . C . PASS END=94668766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 94669486 . C . PASS END=94669551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,132,255:40,0 chr1 94670617 . C . PASS END=94670754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:98:38:0,98,1358:0,98,255:40,0 chr1 94671191 . C . PASS END=94671239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:81:0,120,1800:0,212,255:40,0 chr1 94674388 . C . PASS END=94674460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,108,1800:0,108,255:40,0 chr1 94674810 . A . PASS END=94674906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:72:0,120,1800:0,200,255:40,0 chr1 94685814 . C . PASS END=94685948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:38:0,104,1435:0,104,255:40,0 chr1 94696963 . C . PASS END=94697167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:87:36:0,87,1220:0,87,255:40,0 chr1 94702971 . C . PASS END=94702983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,71,255:26,0 chr1 94713121 . C . PASS END=94713121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 94713122 . A . PASS END=94713123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 94713124 . G . PASS END=94713124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:20,0 chr1 94713125 . G . PASS END=94713125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 94713126 . C . PASS END=94713126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 94713127 . G . PASS END=94713127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,564:0,18,255:18,0 chr1 94713128 . C . PASS END=94713128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,678:0,27,255:19,0 chr1 94713129 . T . PASS END=94713129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 94713130 . C . PASS END=94713130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 94713131 . C . PASS END=94713131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,654:0,32,255:19,0 chr1 94713132 . A . PASS END=94713132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 94713133 . T . PASS END=94713133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,627:0,30,255:18,0 chr1 94884035 . A . PASS END=94884048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 94884049 . C . PASS END=94884050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,714:0,46,255:20,0 chr1 94884051 . A . PASS END=94884053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 94884054 . A . PASS END=94884055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 94884056 . T . PASS END=94884061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 94884062 . G . PASS END=94884062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 94884063 . C . PASS END=94884080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:24,0 chr1 94884081 . C . PASS END=94884081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 94884082 . T . PASS END=94884082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 94884083 . G . PASS END=94884083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 94884084 . G . PASS END=94884096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 94884097 . G . PASS END=94884141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:19,0 chr1 94884142 . C . PASS END=94884144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 94921289 . G . PASS END=94921360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,195,255:40,0 chr1 94924163 . T . PASS END=94924199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:73:0,120,1800:0,186,255:40,0 chr1 94930331 . A . PASS END=94930429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,140,255:40,0 chr1 94933475 . A . PASS END=94933563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:60:0,120,1800:0,180,255:40,1 chr1 94937729 . T . PASS END=94937798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,122,255:40,0 chr1 94939322 . T . PASS END=94939391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:57:0,116,1800:0,116,255:40,0 chr1 94940699 . A . PASS END=94940725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:62:0,120,1800:0,136,255:40,0 chr1 94940726 . T . PASS END=94940762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,184,255:40,0 chr1 94940763 . G A, 47.27 PASS DP=73;MQ=250.00;MQRankSum=7.226;ReadPosRankSum=5.634;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,30,0:0.411,0.000:73:24,13,0:19,17,0:46:82,0,50,1036,1493,2529:255,0,255:36,0:4.7274e+01,1.0303e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,21,8,22:15,28,13,17 chr1 94940764 . G . PASS END=94940796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,120,1800:0,140,255:40,0 chr1 94941170 . A . PASS END=94941170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:35,0 chr1 94941171 . G . PASS END=94941293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:37:0,86,1223:0,86,255:40,0 chr1 94943815 . C . PASS END=94943871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:91:0,120,1800:0,255,255:40,0 chr1 94944080 . G . PASS END=94944106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,170,255:40,0 chr1 94946020 . G . PASS END=94946029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:43:0,88,1482:0,88,255:40,0 chr1 94946030 . G . PASS END=94946030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:52:47:0,52,1399:0,52,255:40,0 chr1 94946031 . C . PASS END=94946036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:97:47:0,97,1532:0,97,255:40,0 chr1 94946037 . G . PASS END=94946037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,6:52:56:52:0,56,1535:0,56,255:40,0 chr1 94946038 . G . PASS END=94946158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:34:0,81,1215:0,90,255:40,0 chr1 94946159 . A . PASS END=94946159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,939:0,46,255:26,0 chr1 94946160 . C . PASS END=94946162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 94948726 . T . PASS END=94948795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,144,255:40,2 chr1 94953098 . G . PASS END=94953167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,172,255:40,0 chr1 94953250 . A . PASS END=94953347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,137,255:40,0 chr1 94953448 . G . PASS END=94953539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,173,255:40,0 chr1 94955281 . T . PASS END=94955372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,138,255:40,0 chr1 94955459 . G . PASS END=94955531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,141,255:40,0 chr1 94956740 . G . PASS END=94956803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:75:0,120,1800:0,188,255:40,0 chr1 94964158 . G . PASS END=94964190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:51:0,114,1667:0,114,255:40,0 chr1 94964191 . C . PASS END=94964235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:49:0,111,1665:0,111,255:40,0 chr1 94964339 . T . PASS END=94964404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:41:0,87,1302:0,87,255:40,0 chr1 94964501 . A . PASS END=94964590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,104,1455:0,104,255:40,0 chr1 94965051 . G . PASS END=94965170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,104,1575:0,104,255:40,0 chr1 94972094 . A . PASS END=94972198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,130,255:40,0 chr1 94980702 . G . PASS END=94980708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,178,255:40,0 chr1 94980709 . T . PASS END=94980759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,185,255:40,0 chr1 94982034 . A . PASS END=94982034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 94982608 . T . PASS END=94982685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,162,255:40,0 chr1 94996016 . T . PASS END=94996136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:35:0,81,1215:0,105,255:40,0 chr1 94996137 . A . PASS END=94996137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1166:0,74,255:26,0 chr1 94996138 . T . PASS END=94996138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 94996139 . G . PASS END=94996152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:25,0 chr1 94997877 . C . PASS END=94998036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:82:33:0,82,1097:0,82,255:40,0 chr1 94998646 . C . PASS END=94998810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:41:0,93,1353:0,93,255:40,0 chr1 94998811 . C . PASS END=94998824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:29:0,72,1080:0,81,255:26,0 chr1 95001521 . T . PASS END=95001521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 95001522 . C . PASS END=95001539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:19,0 chr1 95001540 . C . PASS END=95001540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 95001541 . T . PASS END=95001541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 95001542 . C . PASS END=95001550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:24,0 chr1 95001551 . T . PASS END=95001551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:23,0 chr1 95001552 . C . PASS END=95001562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr1 95001563 . G . PASS END=95001563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 95001564 . C . PASS END=95001564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 95001565 . T . PASS END=95001565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 95001566 . C . PASS END=95001579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:31,0 chr1 95001580 . G . PASS END=95001580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 95001581 . T . PASS END=95001582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 95001583 . C . PASS END=95001583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 95001584 . T . PASS END=95001599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:33,0 chr1 95001600 . A C, 146.31 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,17,0:0,16,0:96:184,99,0,284,284,284:255,99,0:0,0:1.4631e+02,9.6306e+01,0.0000e+00,2.8108e+02,3.1585e+02,2.8409e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,15:0,0,18,15 chr1 95001601 . G . PASS END=95001609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:31,0 chr1 95001610 . A . PASS END=95001610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr1 95001611 . A . PASS END=95001637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1070:0,80,255:31,0 chr1 95001638 . C . PASS END=95001651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1153:0,80,255:30,0 chr1 95001652 . T . PASS END=95001652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:29,0 chr1 95001653 . C . PASS END=95001659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 95001660 . G . PASS END=95001661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 95001662 . G . PASS END=95001670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 95001671 . C . PASS END=95001673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1070:0,74,255:26,0 chr1 95001674 . T . PASS END=95001688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 95001689 . A . PASS END=95001712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,992:0,71,255:26,0 chr1 95001713 . A . PASS END=95001720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 95001867 . T . PASS END=95001867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 95005813 . C . PASS END=95005924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:46:0,120,1800:0,123,255:40,0 chr1 95007093 . C . PASS END=95007101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 95007102 . C . PASS END=95007105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 95007106 . C . PASS END=95007109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 95007110 . T . PASS END=95007110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 95007111 . G . PASS END=95007127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 95007128 . A . PASS END=95007128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 95007129 . G . PASS END=95007172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,892:0,72,255:25,0 chr1 95007173 . G . PASS END=95007173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr1 95007174 . G . PASS END=95007174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 95007175 . C . PASS END=95007175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 95007176 . C . PASS END=95007187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 95007188 . T . PASS END=95007192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:18,0 chr1 95286008 . A . PASS END=95286017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 95286018 . T . PASS END=95286018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:17,0 chr1 95286019 . G . PASS END=95286034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 95286505 . G . PASS END=95286612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:34:0,102,1302:0,102,255:40,0 chr1 95290049 . G . PASS END=95290050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 95290051 . G . PASS END=95290052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 95290053 . T . PASS END=95290053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:27,0 chr1 95290054 . T . PASS END=95290160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1142:0,91,255:39,0 chr1 95290161 . C . PASS END=95290161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 95290162 . T . PASS END=95290162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,861:0,37,255:25,0 chr1 95290163 . C . PASS END=95290167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:25,0 chr1 95290168 . A . PASS END=95290169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 95290170 . G . PASS END=95290170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 95290171 . G . PASS END=95290177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 95290178 . A . PASS END=95290178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 95290179 . T . PASS END=95290180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 95290181 . A . PASS END=95290181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,690:0,11,255:17,0 chr1 95290182 . C . PASS END=95290191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 95291389 . A . PASS END=95291403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1274:0,89,255:37,0 chr1 95291404 . A . PASS END=95291447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,101,1382:0,101,255:40,0 chr1 95291448 . T . PASS END=95291448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1392:0,77,255:37,0 chr1 95291449 . T . PASS END=95291495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1260:0,81,255:40,0 chr1 95291496 . G . PASS END=95291497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 95293063 . A . PASS END=95293064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:21,0 chr1 95293065 . A . PASS END=95293070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 95293071 . T . PASS END=95293071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 95293072 . C . PASS END=95293074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:24,0 chr1 95293075 . T . PASS END=95293076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 95293077 . T . PASS END=95293088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,870:0,72,255:24,0 chr1 95293089 . A . PASS END=95293089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 95293090 . C . PASS END=95293094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:24,0 chr1 95293095 . A . PASS END=95293095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:22,0 chr1 95293096 . A . PASS END=95293102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,986:0,70,255:25,0 chr1 95293103 . G . PASS END=95293103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr1 95293104 . G . PASS END=95293164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1133:0,83,255:35,0 chr1 95293165 . C . PASS END=95293165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 95293166 . C . PASS END=95293172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 95293173 . A . PASS END=95293173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:25,0 chr1 95293174 . G . PASS END=95293185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,918:0,81,255:27,0 chr1 95293186 . T . PASS END=95293199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,70,255:26,0 chr1 95294049 . G . PASS END=95294049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr1 95294050 . G . PASS END=95294142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1166:0,92,255:40,0 chr1 95303267 . C . PASS END=95303269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr1 95303270 . G . PASS END=95303427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:27:0,81,1024:0,81,255:40,0 chr1 95305504 . C . PASS END=95305593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:80:0,120,1800:0,233,255:40,0 chr1 95307556 . T . PASS END=95307680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,110,1535:0,110,255:40,0 chr1 95310834 . G . PASS END=95310834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 95310835 . C . PASS END=95310835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 95310836 . A . PASS END=95310836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 95310837 . G . PASS END=95310848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr1 95310849 . T . PASS END=95310849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 95310850 . T . PASS END=95310852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 95310853 . T . PASS END=95310853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:25,0 chr1 95310854 . T . PASS END=95310859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1086:0,90,255:30,0 chr1 95310860 . T . PASS END=95310860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1007:0,73,255:29,0 chr1 95310861 . C . PASS END=95310874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 95310875 . A . PASS END=95310875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr1 95310876 . A . PASS END=95310925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1194:0,86,255:32,0 chr1 95310926 . T . PASS END=95310929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 95310930 . T . PASS END=95310935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:30,0 chr1 95310936 . C . PASS END=95310936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:29,0 chr1 95310937 . T . PASS END=95310944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1119:0,93,255:31,0 chr1 95310945 . C . PASS END=95310945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 95310946 . C . PASS END=95310955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 95310956 . A . PASS END=95310956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:28,0 chr1 95310957 . T . PASS END=95310974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1033:0,80,255:29,0 chr1 95310975 . T . PASS END=95310979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 95310980 . G . PASS END=95310984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 95310985 . T . PASS END=95311011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,731:0,60,255:26,0 chr1 95311012 . G . PASS END=95311020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 95322891 . G . PASS END=95322900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 95322901 . G . PASS END=95323056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:32:0,86,1180:0,86,255:40,0 chr1 95330299 . A . PASS END=95330334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,104,1419:0,104,255:40,0 chr1 95330335 . G . PASS END=95330371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,122,255:40,0 chr1 95330372 . G A, 49.20 PASS DP=73;MQ=250.00;MQRankSum=7.310;ReadPosRankSum=4.528;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,33,0:0.452,0.000:73:15,20,0:25,13,0:48:84,0,50,1180,1422,2602:255,0,255:37,0:4.9195e+01,7.4034e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,25,17,16:20,20,18,15 chr1 95330373 . T . PASS END=95330409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,179,255:40,0 chr1 95330410 . T . PASS END=95330455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,114,1710:0,133,255:40,0 chr1 95332887 . C . PASS END=95332973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,112,1515:0,112,255:40,0 chr1 95336649 . G . PASS END=95336663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,117,1755:0,123,255:40,0 chr1 95336686 . C . PASS END=95336703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,140,255:40,0 chr1 95354214 . G . PASS END=95354237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:72:0,120,1800:0,159,255:40,0 chr1 95356686 . A . PASS END=95356823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:89:34:0,89,1278:0,89,255:40,0 chr1 95357837 . G . PASS END=95358058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:33:0,81,1305:0,81,255:40,0 chr1 95358059 . G . PASS END=95358065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 95358066 . A . PASS END=95358066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:26,0 chr1 95358067 . A . PASS END=95358068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 95358069 . T . PASS END=95358069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 95358070 . T . PASS END=95358071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 95358072 . T . PASS END=95358073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1039:0,71,255:26,0 chr1 95360374 . A . PASS END=95360478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:90:41:0,90,1350:0,115,255:40,0 chr1 95363298 . C . PASS END=95363325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:39,0 chr1 95363326 . T . PASS END=95363326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr1 95363327 . G . PASS END=95363609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:34:0,93,1329:0,93,255:40,0 chr1 95363610 . T . PASS END=95363620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,86,255:26,0 chr1 95363621 . C . PASS END=95363625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 95363626 . G . PASS END=95363628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 95363629 . A . PASS END=95363630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 95363631 . C . PASS END=95363631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:24,0 chr1 95363632 . A . PASS END=95363639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 95364927 . C . PASS END=95365073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,114,1405:0,114,255:40,0 chr1 95367225 . C . PASS END=95367341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:73:0,120,1800:0,206,255:40,0 chr1 95367677 . C . PASS END=95367686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,153,255:40,0 chr1 95367687 . A . PASS END=95367784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,117,1755:0,120,255:40,0 chr1 95367785 . A . PASS END=95367785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:67:46:0,67,1571:0,67,255:39,0 chr1 95367786 . G . PASS END=95367814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:37:0,83,1260:0,83,255:39,0 chr1 95368678 . C . PASS END=95368744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:35:0,81,1194:0,81,255:40,0 chr1 95368959 . T . PASS END=95369080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1258:0,81,255:40,0 chr1 95391968 . A . PASS END=95391999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 95392000 . C . PASS END=95392006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 95392007 . C . PASS END=95392022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr1 95392023 . G . PASS END=95392078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 95392079 . G . PASS END=95392079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 95392080 . T . PASS END=95392113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,404:0,33,255:13,0 chr1 95392114 . A . PASS END=95392133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,327:0,27,255:9,0 chr1 95392134 . C . PASS END=95392153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 95392154 . C . LowGQ END=95392154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 95392155 . G . PASS END=95392157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 95392158 . A . PASS END=95392158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 95392159 . G . PASS END=95392160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 95392161 . C . PASS END=95392163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 95392164 . T . PASS END=95392170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 95392171 . G . PASS END=95392171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 95392172 . T . PASS END=95392177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 95392178 . G . PASS END=95392178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 95392179 . G . PASS END=95392190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 95392191 . A . PASS END=95392191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 95392192 . G . PASS END=95392202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 95392203 . G . PASS END=95392209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 95392210 . A . PASS END=95392214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 95392215 . G . PASS END=95392229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr1 95392230 . G . PASS END=95392230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 95392231 . G . PASS END=95392240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 95392241 . G . PASS END=95392241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 95392242 . A . PASS END=95392243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:11,0 chr1 95392244 . C . PASS END=95392244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 95392245 . G . PASS END=95392250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 95392251 . G . PASS END=95392252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 95392253 . C . PASS END=95392253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 95392254 . A . PASS END=95392255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 95392256 . A . PASS END=95392266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,41,255:13,0 chr1 95392267 . C . PASS END=95392267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 95392268 . C . PASS END=95392285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 95392286 . C . PASS END=95392296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,491:0,42,255:15,0 chr1 95392394 . C . PASS END=95392394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 95392395 . T . PASS END=95392395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,566:0,2,255:17,0 chr1 95392396 . T . PASS END=95392397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 95392398 . T . PASS END=95392400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 95392401 . T . PASS END=95392402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,590:0,18,255:18,0 chr1 95392403 . G . PASS END=95392403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 95392404 . A . PASS END=95392404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 95392405 . C . PASS END=95392410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:19,0 chr1 95392411 . C . PASS END=95392411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 95392412 . C . PASS END=95392417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,646:0,24,255:19,0 chr1 95392418 . C . PASS END=95392418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr1 95392419 . C . PASS END=95392424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:19,0 chr1 95392425 . G . PASS END=95392425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 95392426 . A . PASS END=95392427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 95392428 . G . PASS END=95392428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 95392429 . G . PASS END=95392433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr1 95392434 . T . PASS END=95392434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:20,0 chr1 95392435 . T . PASS END=95392435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 95392436 . G . PASS END=95392437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,709:0,30,255:19,0 chr1 95392438 . T . PASS END=95392438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:19,0 chr1 95392439 . G . PASS END=95392441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 95392442 . G . PASS END=95392442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr1 95392443 . T . PASS END=95392443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,637:0,8,255:17,0 chr1 95392444 . G . PASS END=95392444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr1 95392445 . G . PASS END=95392447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 95392448 . C . PASS END=95392450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 95396358 . T . PASS END=95396469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:52:0,120,1800:0,140,255:40,2 chr1 95448632 . T . PASS END=95448642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 95448643 . G . PASS END=95448643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 95448644 . C . PASS END=95448647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 95448648 . A . PASS END=95448837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1157:0,89,255:40,0 chr1 95448838 . A . PASS END=95448846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:25,0 chr1 95448847 . G . PASS END=95448862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:19:0,51,765:0,57,255:19,0 chr1 95449145 . T . PASS END=95449189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,152,255:40,0 chr1 95487876 . T . PASS END=95487923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,112,1800:0,112,255:40,0 chr1 95492675 . T . PASS END=95492675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 95492680 . C . PASS END=95492680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 95492685 . C . PASS END=95492686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 95492687 . A . PASS END=95492687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:24,0 chr1 95492688 . A . PASS END=95492701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr1 95492702 . T . PASS END=95492702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 95492703 . G . PASS END=95492712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 95492713 . G . PASS END=95492799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,984:0,81,255:40,0 chr1 95492800 . A . PASS END=95492816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr1 95501402 . C . PASS END=95501438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:91:0,120,1800:0,185,255:40,0 chr1 95530422 . C . PASS END=95530573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:33:0,87,1305:0,99,255:40,0 chr1 95538318 . C . PASS END=95538321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr1 95538322 . A . PASS END=95538322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,839:0,9,255:24,0 chr1 95538323 . C . PASS END=95538331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,881:0,78,255:26,0 chr1 95538332 . T . PASS END=95538332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:25,0 chr1 95538333 . A . PASS END=95538337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:25,0 chr1 95538338 . G . PASS END=95538340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 95538341 . A . PASS END=95538341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1054:0,60,255:28,0 chr1 95538342 . C . PASS END=95538342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 95538343 . T . PASS END=95538343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 95538344 . G . PASS END=95538346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 95538347 . A . PASS END=95538348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 95538349 . A . PASS END=95538350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 95538351 . T . PASS END=95538351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:30,0 chr1 95538352 . C . PASS END=95538354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 95538355 . G . PASS END=95538355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:27:32:0,27,1041:0,27,255:29,0 chr1 95538356 . G . PASS END=95538357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:31,0 chr1 95538358 . G . PASS END=95538358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1007:0,63,255:29,0 chr1 95538359 . C . PASS END=95538368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1150:0,80,255:33,0 chr1 95538369 . A . PASS END=95538369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1023:0,49,255:30,0 chr1 95538370 . T . PASS END=95538390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1233:0,89,255:34,0 chr1 95538391 . T . PASS END=95538391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1131:0,55,255:29,0 chr1 95538392 . T . PASS END=95538392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:30,0 chr1 95538393 . C . PASS END=95538423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1111:0,85,255:32,0 chr1 95538424 . C . PASS END=95538445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,939:0,64,255:26,0 chr1 95538446 . G . PASS END=95538446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:21,0 chr1 95538447 . C . PASS END=95538450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:23,0 chr1 95538451 . C . PASS END=95538454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:16,0 chr1 95609458 . A . PASS END=95609612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:40:0,108,1620:0,120,255:40,0 chr1 95614258 . G . PASS END=95614347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:45:0,120,1800:0,126,255:40,0 chr1 95615764 . G . PASS END=95615800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,206,255:40,0 chr1 95615801 . G . PASS END=95615822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:78:0,120,1800:0,218,255:40,0 chr1 95616881 . A . PASS END=95616975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:50:0,120,1800:0,150,255:40,0 chr1 95639372 . A . PASS END=95639445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,166,255:40,0 chr1 95657106 . G . PASS END=95657424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:89:35:0,89,1249:0,89,255:40,0 chr1 95696458 . A . PASS END=95696550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,128,255:40,0 chr1 95699787 . A . PASS END=95699796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 95699797 . C . PASS END=95699808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 95699809 . A . PASS END=95699809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 95699810 . G . PASS END=95699841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 95699842 . C . PASS END=95699842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 95699843 . C . PASS END=95699851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 95699852 . G . PASS END=95699871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,635:0,40,255:18,0 chr1 95705426 . A . PASS END=95705465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,112,1800:0,112,255:40,0 chr1 95709767 . A . PASS END=95709783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:42:0,109,1353:0,109,255:40,0 chr1 95709784 . T . PASS END=95709820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,173,255:40,0 chr1 95709821 . T C, 254.21 PASS DP=69;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,29,0:0,40,0:204:292,207,0,2630,207,2630:255,208,0:0,0:2.5421e+02,2.0421e+02,0.0000e+00,4.5000e+02,2.3898e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,36:0,0,31,38 chr1 95709822 . G . PASS END=95709858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:73:0,120,1800:0,209,255:40,0 chr1 95709859 . A . PASS END=95709901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,209,255:40,0 chr1 95709902 . A . PASS END=95709938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:61:0,120,1800:0,153,255:40,1 chr1 95709939 . T G, 232.67 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,29,0:0,33,0:183:270,186,0,370,370,370:255,186,0:0,0:2.3267e+02,1.8267e+02,0.0000e+00,3.6744e+02,4.0221e+02,3.7045e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,31,31:0,0,34,28 chr1 95709940 . T . PASS END=95709976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,172,255:40,0 chr1 95709977 . T . PASS END=95710269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:38:0,97,1241:0,97,255:40,0 chr1 95712098 . G . PASS END=95712213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:87:0,120,1800:0,221,255:40,0 chr1 95712312 . G . PASS END=95712426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:46:0,120,1800:0,134,255:40,0 chr1 97187421 . A . PASS END=97187425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 97187426 . C . PASS END=97187426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 97187427 . G . PASS END=97187430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 97187431 . A . PASS END=97187432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 97187433 . G . PASS END=97187435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 97187436 . A . PASS END=97187436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 97187437 . T . PASS END=97187445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:29,0 chr1 97187446 . C . PASS END=97187452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,70,255:26,0 chr1 97189120 . A . PASS END=97189128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,213,255:40,0 chr1 97189129 . T . PASS END=97189150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:78:0,120,1800:0,235,255:40,0 chr1 97215171 . A . PASS END=97215242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:85:0,120,1800:0,222,255:40,0 chr1 97216981 . A . PASS END=97217056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,120,1800:0,141,255:40,0 chr1 97235259 . C . PASS END=97235431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:92:35:0,92,1294:0,92,255:40,0 chr1 97236264 . G . PASS END=97236407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:45:0,108,1620:0,135,255:40,0 chr1 97243141 . C . PASS END=97243305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:35:0,87,1319:0,87,255:40,0 chr1 97243392 . A . PASS END=97243502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:67:0,120,1800:0,174,255:40,0 chr1 97250615 . G . PASS END=97250810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:38:0,105,1443:0,107,255:40,0 chr1 97270341 . G . PASS END=97270350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1005:0,84,255:30,0 chr1 97270351 . T . PASS END=97270351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 97270352 . G . PASS END=97270352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 97270353 . C . PASS END=97270353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 97270354 . A . PASS END=97270453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:31:0,80,1169:0,80,255:40,0 chr1 97270454 . G . PASS END=97270465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,73,255:26,0 chr1 97270466 . G . PASS END=97270466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,853:0,26,255:20,0 chr1 97270467 . T . PASS END=97270468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:22,0 chr1 97270469 . C . PASS END=97270470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:25:0,47,876:0,47,255:21,0 chr1 97270471 . G . PASS END=97270473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 97270474 . G . PASS END=97270474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 97270475 . G . PASS END=97270479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,746:0,66,255:22,0 chr1 97270480 . C . PASS END=97270480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 97270481 . A . PASS END=97270482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 97270483 . T . PASS END=97270483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 97270484 . T . PASS END=97270492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 97270493 . G . PASS END=97270495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,751:0,50,255:18,0 chr1 97271975 . A . PASS END=97272008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:89:0,120,1800:0,218,255:40,0 chr1 97272422 . G . PASS END=97272514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:85:42:0,85,1557:0,85,255:40,0 chr1 97278268 . C . PASS END=97278484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:83:28:0,83,1019:0,83,255:40,1 chr1 97278585 . T . PASS END=97278662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,110,1528:0,110,255:40,0 chr1 97278829 . A . PASS END=97278841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,130,255:40,0 chr1 97278842 . A . PASS END=97278961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,137,255:40,0 chr1 97523004 . G . PASS END=97523004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 97539400 . G . PASS END=97539400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 97543343 . C . PASS END=97543343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr1 97543379 . T . PASS END=97543379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 97543470 . T . PASS END=97543470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 97543482 . T . PASS END=97543482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,108,1620:0,144,255:36,0 chr1 97543486 . G . PASS END=97543486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,111,1665:0,135,255:37,0 chr1 97543522 . A . PASS END=97543522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 97543532 . T . PASS END=97543532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 97543680 . G . PASS END=97543680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 97543749 . C . PASS END=97543749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 97543859 . C . PASS END=97543859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 97543867 . C . PASS END=97543867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1612:0,116,255:39,0 chr1 97543897 . A . PASS END=97543897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 97543906 . C . PASS END=97543906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 97543946 . G . PASS END=97543946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 97544029 . T . PASS END=97544029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 97544056 . C . PASS END=97544056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr1 97544074 . A . PASS END=97544074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 97544100 . A . PASS END=97544100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 97544116 . G . PASS END=97544116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 97544142 . T . PASS END=97544142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 97544250 . T . PASS END=97544250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 97544290 . C . PASS END=97544290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 97544339 . T . PASS END=97544339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,111,1665:0,141,255:37,0 chr1 97544373 . T . PASS END=97544373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 97544532 . T . PASS END=97544703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:86:42:0,86,1620:0,86,255:40,0 chr1 97547886 . C . PASS END=97548027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:41:0,114,1710:0,123,255:40,0 chr1 97564045 . C . PASS END=97564188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:39:0,104,1316:0,104,255:40,0 chr1 97602994 . A . PASS END=97602994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:86:0,120,1800:0,242,255:40,0 chr1 97658484 . T . PASS END=97658531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:55:0,120,1800:0,147,255:40,0 chr1 97658624 . C . PASS END=97658799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:37:0,84,1260:0,96,255:40,0 chr1 97658800 . C . PASS END=97658804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:32:0,75,1125:0,80,255:26,0 chr1 97700408 . C . PASS END=97700414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:37:0,98,1357:0,98,255:37,0 chr1 97700415 . A . PASS END=97700415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 97700416 . C . PASS END=97700550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:34:0,87,1241:0,89,255:40,0 chr1 97770815 . C . PASS END=97770933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:44:0,96,1440:0,119,255:40,0 chr1 97770934 . C . PASS END=97770934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:78:44:0,78,1170:0,132,255:26,0 chr1 97770945 . C . PASS END=97770945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,83,255:24,0 chr1 97771731 . A . PASS END=97771731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1363:0,95,255:36,0 chr1 97771733 . C . PASS END=97771848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,100,255:40,0 chr1 97771849 . G . PASS END=97771853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:30:0,78,1170:0,90,255:26,0 chr1 97839116 . C . PASS END=97839116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 97839117 . C . PASS END=97839120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 97839121 . C . PASS END=97839121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 97839122 . C . PASS END=97839125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 97839126 . G . PASS END=97839128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 97839129 . C . PASS END=97839129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 97839130 . A . PASS END=97839140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr1 97839141 . T . PASS END=97839141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 97839142 . C . PASS END=97839163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1243:0,91,255:33,0 chr1 97839164 . A . PASS END=97839164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1122:0,52,255:28,0 chr1 97839165 . T . PASS END=97839186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1019:0,80,255:30,0 chr1 97839187 . T . PASS END=97839187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,887:0,45,255:27,0 chr1 97839188 . C . PASS END=97839193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 97839194 . C . PASS END=97839194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 97839195 . A . PASS END=97839195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 97839196 . G . PASS END=97839200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 97847874 . T . PASS END=97847874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,1:112:99:112:0,120,1800:0,255,255:40,0 chr1 97847948 . C . PASS END=97848017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:80:0,120,1800:0,207,255:40,0 chr1 97862780 . C . PASS END=97862780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 97915614 . C . PASS END=97915748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:34:0,87,1305:0,102,255:40,0 chr1 97915749 . T . PASS END=97915754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 97915755 . T . PASS END=97915755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:26,2 chr1 97915756 . G . PASS END=97915756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1110:0,30,255:26,2 chr1 97915757 . G . PASS END=97915757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:27,0 chr1 97915758 . G . PASS END=97915773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1109:0,90,255:30,0 chr1 97915774 . A . PASS END=97915779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 97981282 . C . PASS END=97981283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 97981284 . T . PASS END=97981285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 97981286 . T . PASS END=97981286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 97981287 . C . PASS END=97981289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 97981290 . G . PASS END=97981290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 97981291 . A . PASS END=97981291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 97981292 . G . PASS END=97981292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 97981293 . A . PASS END=97981497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:30:0,86,1062:0,86,255:40,0 chr1 97981506 . T . PASS END=97981506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 98015115 . C . PASS END=98015296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:37:0,103,1253:0,103,255:40,0 chr1 98015297 . T . PASS END=98015297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1281:0,75,255:37,0 chr1 98015298 . T . PASS END=98015300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1413:0,114,255:38,0 chr1 98015302 . T . PASS END=98015303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1465:0,114,255:38,0 chr1 98015314 . T . PASS END=98015314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,117,255:29,0 chr1 98039315 . C . PASS END=98039325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,816:0,69,255:26,0 chr1 98039326 . A . PASS END=98039503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:35:0,87,1235:0,87,255:40,0 chr1 98039504 . T . PASS END=98039526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,117,1800:0,117,255:40,0 chr1 98045449 . G . PASS END=98045449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1637:0,119,255:40,0 chr1 98058774 . C . PASS END=98058775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 98058776 . C . PASS END=98058943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1064:0,84,255:40,0 chr1 98060615 . C . PASS END=98060723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:87:35:0,87,1305:0,102,255:40,0 chr1 98144638 . G . PASS END=98144638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 98144651 . C . PASS END=98144738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:50:0,120,1800:0,143,255:40,0 chr1 98144740 . T . PASS END=98144740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 98157268 . T . PASS END=98157268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 98157271 . A . PASS END=98157271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 98157273 . C . PASS END=98157354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,125,255:40,0 chr1 98162362 . A . PASS END=98162362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr1 98164906 . C . PASS END=98165053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1047:0,86,255:40,0 chr1 98165054 . G . PASS END=98165088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,96,255:40,0 chr1 98165089 . C . PASS END=98165090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,86,255:26,0 chr1 98165091 . T C, 49.16 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=0.555;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:10,10,0:9,5,0:48:84,0,50,527,614,1141:255,0,255:14,0:4.9165e+01,7.4293e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,6,9:8,11,7,8 chr1 98165092 . T . PASS END=98165103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,74,255:25,0 chr1 98186444 . T . PASS END=98186482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,207,255:40,0 chr1 98187061 . C . PASS END=98187061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1443:0,117,255:39,0 chr1 98187065 . C . PASS END=98187228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,99,1485:0,101,255:40,0 chr1 98205933 . T . PASS END=98205933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:58:0,120,1800:0,141,255:40,0 chr1 98205948 . C . PASS END=98206035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:54:0,120,1800:0,155,255:40,0 chr1 98293669 . C . PASS END=98293729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:91:72:0,91,1800:0,91,255:40,0 chr1 98293730 . T . PASS END=98293730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,13:88:19:88:0,19,2208:0,19,255:40,0 chr1 98293731 . T . PASS END=98293734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:88:0,120,1800:0,214,255:40,0 chr1 98293735 . C . PASS END=98293735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,11:89:69:89:0,69,2336:0,69,255:40,0 chr1 98293736 . T . PASS END=98293752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:85:0,109,1800:0,109,255:40,0 chr1 98293821 . C . PASS END=98293821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,3:95:99:95:0,120,1800:0,236,255:40,0 chr1 98348818 . A . PASS END=98348818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 98348820 . A . PASS END=98348847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:70:0,120,1800:0,202,255:40,0 chr1 98348848 . C . PASS END=98348884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,213,255:40,0 chr1 98348885 . G A, 304.91 PASS DP=86;MQ=249.90;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,86,0:1.000,0.000:86:0,53,0:0,33,0:255:343,258,0,3250,258,3250:255,255,0:0,0:3.0491e+02,2.5491e+02,0.0000e+00,4.4853e+02,2.8968e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,48:0,0,27,59 chr1 98348886 . C . PASS END=98348922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:71:0,120,1800:0,200,255:40,0 chr1 98348923 . A . PASS END=98348930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,204,255:40,0 chr1 98386440 . C . PASS END=98386454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 98386455 . G . PASS END=98386456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr1 98386457 . C . PASS END=98386457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 98386458 . C . PASS END=98386462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 98386463 . T . PASS END=98386463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 98386464 . G . PASS END=98386478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1288:0,90,255:36,0 chr1 98386586 . A . PASS END=98386586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,855:0,70,255:18,0 chr1 98386590 . T . PASS END=98386590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 98386600 . G . PASS END=98386600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 98386622 . G . PASS END=98386622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:11,0 chr1 99127222 . A . PASS END=99127230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 99127231 . C . PASS END=99127237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 99127238 . G . PASS END=99127238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 99127239 . A . PASS END=99127239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 99127240 . G . PASS END=99127240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 99127241 . C . PASS END=99127242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 99127243 . G . PASS END=99127258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 99127259 . T . LowGQ END=99127259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 99127260 . G . PASS END=99127263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 99127264 . G . PASS END=99127264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 99127265 . C . PASS END=99127265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 99127266 . C . PASS END=99127266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 99127267 . G . LowGQ END=99127268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 99127269 . C . PASS END=99127276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 99127277 . G . PASS END=99127277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 99127278 . C . PASS END=99127281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 99127282 . C . PASS END=99127283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 99127284 . C . PASS END=99127285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 99127286 . G . PASS END=99127291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:15,0 chr1 99127292 . A . PASS END=99127297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 99127298 . A . PASS END=99127298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 99127299 . G . PASS END=99127321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 99127322 . C . PASS END=99127333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:14,0 chr1 99127334 . C . PASS END=99127334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 99127335 . G . PASS END=99127345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 99127346 . C . PASS END=99127346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 99127347 . C . PASS END=99127348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,576:0,45,255:16,0 chr1 99127349 . A . PASS END=99127349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 99127350 . C . PASS END=99127354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 99127355 . A . PASS END=99127384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 99127385 . G . PASS END=99127385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 99127386 . C . PASS END=99127391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr1 99127392 . T C, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,11,0:0,4,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,5:0,0,10,5 chr1 99127393 . G . PASS END=99127396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 99127397 . C . PASS END=99127397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 99127398 . T . PASS END=99127429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 99127430 . T . PASS END=99127453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 99127454 . A . PASS END=99127464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 99127465 . A . PASS END=99127467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 99128262 . A . PASS END=99128372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,84,255:40,0 chr1 99150441 . G . PASS END=99150443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 99150444 . G . PASS END=99150449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 99150450 . T . PASS END=99150454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 99150455 . G . PASS END=99150597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:81:33:0,81,1215:0,99,255:40,0 chr1 99150598 . T . PASS END=99150623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:47:0,117,1755:0,121,255:40,0 chr1 99156631 . A . PASS END=99156718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,130,255:40,0 chr1 99156719 . C . PASS END=99156735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:43:0,81,1215:0,129,255:40,0 chr1 99156736 . A . PASS END=99156738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:78:41:0,78,1170:0,107,255:26,0 chr1 99156739 . C . PASS END=99156740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr1 99156741 . A . PASS END=99156741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:26,0 chr1 99157091 . C . PASS END=99157255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:95:37:0,95,1344:0,95,255:40,1 chr1 99161074 . G . PASS END=99161082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:25,0 chr1 99161083 . T . PASS END=99161272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:81:28:0,81,988:0,84,255:40,0 chr1 99164262 . A . PASS END=99164292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,102,1459:0,102,255:40,0 chr1 99164293 . A . PASS END=99164396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,135,255:40,0 chr1 99164397 . C . PASS END=99164433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,99,1590:0,99,255:40,0 chr1 99164434 . G A, 172.03 PASS DP=42;MQ=210.61;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,23,0:0,19,0:122:210,125,0,1533,125,1533:255,129,0:0,0:1.7203e+02,1.2203e+02,0.0000e+00,4.5000e+02,1.5680e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,26:0,0,19,23 chr1 99164435 . T . PASS END=99164453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,89,255:40,0 chr1 99164454 . T . PASS END=99164461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,86,255:26,0 chr1 99167373 . G . PASS END=99167459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:84:0,120,1800:0,236,255:40,0 chr1 99203793 . C . PASS END=99203945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:61:0,120,1800:0,171,255:40,0 chr1 99225610 . T . PASS END=99225626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1606:0,116,255:40,0 chr1 99225627 . G A, 178.50 PASS DP=44;MQ=246.74;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,18,0:0,26,0:128:216,132,0,1647,132,1647:255,132,0:0,0:1.7850e+02,1.2850e+02,0.0000e+00,4.5000e+02,1.6327e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,23:0,0,23,21 chr1 99225628 . T . PASS END=99225664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,120,1800:0,120,255:40,0 chr1 99225665 . A . PASS END=99225687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,108,1568:0,108,255:40,0 chr1 99358570 . T . PASS END=99358660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:35:0,81,1288:0,81,255:40,1 chr1 99362818 . C . PASS END=99362832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 99362833 . T . PASS END=99362851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 99362852 . T . PASS END=99362852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 99362853 . T . PASS END=99362853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 99362854 . A . PASS END=99362854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 99362855 . T . PASS END=99362914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1058:0,83,255:33,0 chr1 99362915 . G . PASS END=99362940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,62,255:26,0 chr1 99362941 . C . PASS END=99362945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 99378520 . T . PASS END=99378537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:98:0,120,1800:0,255,255:40,0 chr1 99380342 . C . PASS END=99380476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,111,1482:0,111,255:40,0 chr1 99387438 . C . PASS END=99387441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,111,1380:0,111,255:38,0 chr1 99387442 . A . PASS END=99387442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr1 99387443 . A . PASS END=99387578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:98:38:0,98,1380:0,98,255:40,0 chr1 99387579 . G . PASS END=99387594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:57:0,81,1215:0,138,255:40,0 chr1 99387595 . A . PASS END=99387603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:66:53:0,66,990:0,143,255:26,0 chr1 99387604 . G . PASS END=99387608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:42:51:0,42,630:0,106,255:18,0 chr1 99387609 . G . PASS END=99387609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:39:51:0,39,585:0,115,255:12,0 chr1 99387610 . T . PASS END=99387612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:24:50:0,24,360:0,114,255:8,0 chr1 99387613 . A . PASS END=99387614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:18:47:0,18,270:0,124,255:5,0 chr1 99418626 . G . PASS END=99418626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 99418627 . G . PASS END=99418634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,699:0,60,255:25,0 chr1 99418635 . C . PASS END=99418635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:28,0 chr1 99418636 . A . PASS END=99418636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr1 99418637 . T . PASS END=99418861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:28:0,84,1031:0,84,255:40,0 chr1 99418862 . C . PASS END=99418865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1089:0,82,255:29,0 chr1 99418866 . T . PASS END=99418866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr1 99418867 . G . PASS END=99418872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 99418873 . A . PASS END=99418876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,995:0,73,255:29,0 chr1 99422165 . C . PASS END=99422297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1276:0,95,255:40,0 chr1 99469991 . C . PASS END=99470023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:18,0 chr1 99470024 . G . PASS END=99470030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 99470031 . A . PASS END=99470031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 99470032 . C . PASS END=99470048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:26,0 chr1 99470049 . C . PASS END=99470049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 99470050 . T . PASS END=99470051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 99470052 . T . PASS END=99470052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:24,0 chr1 99470053 . C . PASS END=99470053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 99470054 . C . PASS END=99470068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 99470069 . G . PASS END=99470070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:28,0 chr1 99470071 . G . PASS END=99470091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:29,0 chr1 99470092 . G . PASS END=99470092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 99470093 . G . PASS END=99470094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 99470095 . A . PASS END=99470095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 99470096 . G . PASS END=99470099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 99470100 . A . PASS END=99470119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 99470120 . G . PASS END=99470122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 99470123 . C . PASS END=99470124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 99470125 . T . PASS END=99470127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 99470128 . C . PASS END=99470138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 99470139 . A . PASS END=99470143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 99470144 . G . PASS END=99470162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 99470163 . C . PASS END=99470188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,630:0,41,255:19,0 chr1 99470189 . G . PASS END=99470192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 99470193 . A . PASS END=99470194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:17:0,24,360:0,51,255:9,0 chr1 99470195 . G . PASS END=99470195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:8,0 chr1 99470196 . C . PASS END=99470211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:9:0,21,315:0,27,255:9,0 chr1 99470212 . C . PASS END=99470213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 99470214 . G . PASS END=99470223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 99470224 . G . PASS END=99470227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 99730006 . A . PASS END=99730010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 99730011 . G . PASS END=99730011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,738:0,42,255:23,0 chr1 99730012 . C . PASS END=99730013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 99730014 . C . PASS END=99730039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,950:0,81,255:34,0 chr1 99730040 . A . PASS END=99730040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:32,0 chr1 99730041 . A . PASS END=99730062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1255:0,89,255:35,0 chr1 99730063 . C . PASS END=99730063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:30,0 chr1 99730064 . G . PASS END=99730098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1150:0,85,255:33,0 chr1 99730099 . G . PASS END=99730101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,86,255:26,0 chr1 99730102 . G . PASS END=99730114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:28,0 chr1 99730115 . C . PASS END=99730130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,947:0,65,255:26,0 chr1 99730131 . A . PASS END=99730131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,898:0,37,255:23,0 chr1 99730132 . C . PASS END=99730145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 99730146 . A . PASS END=99730146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:22,0 chr1 99730147 . G . PASS END=99730150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1000:0,68,255:26,0 chr1 99730151 . T . PASS END=99730151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:24,0 chr1 99730152 . G . PASS END=99730175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,917:0,64,255:26,0 chr1 99730176 . C . PASS END=99730176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 99730177 . A . PASS END=99730178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 99730179 . A . PASS END=99730203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,50,255:18,0 chr1 99730204 . C . PASS END=99730204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 99730205 . T . PASS END=99730216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,645:0,51,255:18,0 chr1 99730217 . A . PASS END=99730217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 99730218 . T . PASS END=99730227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 99753521 . T . PASS END=99753706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:36:0,91,1250:0,91,255:40,0 chr1 99762294 . A . PASS END=99762306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1111:0,90,255:31,0 chr1 99762307 . A . PASS END=99762307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,965:0,79,255:30,0 chr1 99762308 . A . PASS END=99762348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1133:0,82,255:33,0 chr1 99762349 . T . PASS END=99762350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 99762351 . G . PASS END=99762367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1194:0,83,255:33,0 chr1 99762368 . T . PASS END=99762371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 99762372 . G . PASS END=99762378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 99762379 . G . PASS END=99762379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 99762380 . C . PASS END=99762380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 99762381 . T . PASS END=99762395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,992:0,68,255:26,0 chr1 99762396 . T . PASS END=99762396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 99762397 . T . PASS END=99762404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:27,0 chr1 99762405 . C . PASS END=99762407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 99762408 . G . PASS END=99762418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,67,255:24,0 chr1 99762419 . C . PASS END=99762423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,61,255:19,0 chr1 99764527 . A . PASS END=99764786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:87:38:0,87,1305:0,114,255:40,0 chr1 99766465 . A . PASS END=99766522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:57:0,120,1800:0,138,255:40,0 chr1 99767280 . A . PASS END=99767284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr1 99767285 . C . PASS END=99767444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:29:0,83,1172:0,83,255:40,0 chr1 99767445 . C . PASS END=99767453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:36:0,66,990:0,108,255:24,0 chr1 99771241 . G . PASS END=99771772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:82:31:0,82,1082:0,82,255:40,0 chr1 99771773 . A . PASS END=99771773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 99771774 . G . PASS END=99771779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr1 99771780 . C . PASS END=99771780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr1 99771781 . A . PASS END=99771782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1113:0,96,255:32,0 chr1 99771783 . A . PASS END=99771783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,942:0,62,255:30,0 chr1 99771784 . A . PASS END=99771813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1117:0,80,255:35,0 chr1 99771814 . A . PASS END=99771822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 99771823 . C . PASS END=99771826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 99771827 . G . PASS END=99771827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 99771828 . A . PASS END=99771889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1147:0,80,255:34,0 chr1 99771890 . A . PASS END=99771890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1111:0,63,255:32,0 chr1 99771891 . G . PASS END=99772113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:34:0,89,1100:0,89,255:40,0 chr1 99772114 . G . PASS END=99772114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 99772115 . A . PASS END=99772262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:34:0,89,1294:0,89,255:40,0 chr1 99772263 . C . PASS END=99772263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr1 99772264 . A . PASS END=99772282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:37:0,82,1421:0,82,255:37,0 chr1 99772283 . C . PASS END=99772283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:32,0 chr1 99772284 . A . PASS END=99772345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1164:0,85,255:35,0 chr1 99772346 . A . PASS END=99772346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:29,0 chr1 99772347 . T . PASS END=99772366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1157:0,93,255:31,0 chr1 99772367 . A . PASS END=99772367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 99772368 . C . PASS END=99772548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1119:0,82,255:40,0 chr1 99772549 . C . PASS END=99772566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,77,255:26,0 chr1 100111874 . A . PASS END=100111918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,193,255:40,0 chr1 100127875 . G . PASS END=100127955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,101,1575:0,101,255:40,0 chr1 100133198 . A . PASS END=100133214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1768:0,120,255:40,0 chr1 100133215 . G . PASS END=100133215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,7:57:19:57:0,19,1621:0,19,255:40,0 chr1 100133216 . A . PASS END=100133219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:98:56:0,98,1690:0,98,255:40,0 chr1 100133220 . G . PASS END=100133220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,6:57:71:57:0,71,1662:0,71,255:40,0 chr1 100133221 . G . PASS END=100133221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,6:57:57:57:0,57,1601:0,57,255:40,0 chr1 100133222 . C . PASS END=100133322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:90:48:0,90,1350:0,113,255:40,0 chr1 100152232 . G . PASS END=100152346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,177,255:40,0 chr1 100152486 . T . PASS END=100152519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,0:123:99:118:0,120,1800:0,255,255:40,0 chr1 100152632 . A . PASS END=100152745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:68:0,120,1800:0,181,255:40,0 chr1 100154331 . C . PASS END=100154636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:43:0,81,1615:0,81,255:40,0 chr1 100154637 . G . PASS END=100154668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:82:55:0,82,1752:0,82,255:40,0 chr1 100154669 . G . PASS END=100154669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:32:59:0,32,1598:0,32,255:40,0 chr1 100154670 . A . PASS END=100154673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,144,255:40,0 chr1 100154674 . G . PASS END=100154674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,7:60:35:60:0,35,1530:0,35,255:40,0 chr1 100154675 . A . PASS END=100154680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,108,1800:0,108,255:40,0 chr1 100154681 . A . PASS END=100154681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,6:64:78:64:0,78,1909:0,78,255:40,0 chr1 100154682 . T . PASS END=100154688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,132,255:40,0 chr1 100154689 . T . PASS END=100154689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,9:61:19:61:0,19,1554:0,19,255:40,0 chr1 100154690 . A . PASS END=100154690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 100154691 . A . PASS END=100154691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:76:61:0,76,1506:0,76,255:40,0 chr1 100154692 . T . PASS END=100154711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,128,255:40,0 chr1 100154712 . A . PASS END=100155347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,107,1496:0,107,255:40,1 chr1 100155348 . A . PASS END=100155348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,7:69:77:69:0,77,2038:0,77,255:40,0 chr1 100155349 . A . PASS END=100155472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,106,1645:0,106,255:40,0 chr1 100159575 . C . PASS END=100159618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:82:0,120,1800:0,215,255:40,0 chr1 100174454 . C . PASS END=100174676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,109,1710:0,109,255:40,0 chr1 100174754 . C . PASS END=100174815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:39:0,99,1452:0,100,255:40,0 chr1 100176362 . C . PASS END=100176505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,120,1800:0,127,255:40,0 chr1 100177545 . T . PASS END=100177576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:77:0,120,1800:0,217,255:40,0 chr1 100177661 . C . PASS END=100177719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:48:0,118,1800:0,118,255:40,0 chr1 100177974 . C . PASS END=100178071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,114,1710:0,116,255:40,0 chr1 100181142 . C . PASS END=100181228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:31:0,93,1172:0,93,255:40,0 chr1 100182966 . C . PASS END=100183076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:32:0,90,1350:0,96,255:40,0 chr1 100183077 . G . PASS END=100183081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:25,0 chr1 100185090 . C . PASS END=100185203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:36:0,95,1316:0,95,255:40,0 chr1 100194049 . C . PASS END=100194196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:90:38:0,90,1350:0,100,255:40,0 chr1 100195206 . C . PASS END=100195291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1150:0,85,255:40,0 chr1 100195292 . C . PASS END=100195292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:27,0 chr1 100195293 . A . PASS END=100195293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 100195294 . T . PASS END=100195304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:27:0,66,990:0,81,255:26,0 chr1 100203642 . C . PASS END=100203647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1362:0,117,255:39,0 chr1 100203648 . C T, 36.63 PASS DP=39;MQ=250.00;MQRankSum=4.914;ReadPosRankSum=-0.167;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,12,0:0.308,0.000:39:14,5,0:13,7,0:37:71,0,50,392,958,1350:255,0,255:27,0:3.6626e+01,9.6617e-04,5.3001e+01,3.9233e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,11,8,4:17,10,7,5 chr1 100203649 . T . PASS END=100203692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,101,1396:0,101,255:40,0 chr1 100203693 . G A, 35.88 PASS DP=46;MQ=250.00;MQRankSum=5.336;ReadPosRankSum=3.330;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,14,0:0.304,0.000:46:18,5,0:14,9,0:36:71,0,50,464,1143,1607:255,0,255:30,0:3.5877e+01,1.1443e-03,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,14,5,9:14,18,8,6 chr1 100203694 . C . PASS END=100203730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,118,1560:0,118,255:40,0 chr1 100203731 . A . PASS END=100203778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:40:0,84,1245:0,84,255:40,0 chr1 100203779 . G . PASS END=100203788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,86,255:25,0 chr1 100203789 . A . PASS END=100203789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1141:0,55,255:25,0 chr1 100203790 . C . PASS END=100203816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,885:0,64,255:26,0 chr1 100203817 . G . PASS END=100203817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 100203818 . C . PASS END=100203819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 100203820 . C . PASS END=100203824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 100206349 . T . PASS END=100206496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:51:0,120,1800:0,123,255:40,0 chr1 100207735 . A . PASS END=100207829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,107,1800:0,107,255:40,0 chr1 100212850 . C . PASS END=100212854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 100212855 . T . PASS END=100212856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 100212857 . T . PASS END=100212857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:28,0 chr1 100212858 . C . PASS END=100212869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr1 100212870 . A . PASS END=100212870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 100212871 . A . PASS END=100212873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 100212874 . T . PASS END=100212874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 100212875 . T . PASS END=100212984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1078:0,84,255:40,0 chr1 100212985 . A . PASS END=100212985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:29,0 chr1 100212986 . A . PASS END=100212986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 100214129 . C . PASS END=100214324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:33:0,90,1350:0,99,255:40,0 chr1 100315832 . C . PASS END=100315832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 100315906 . C . PASS END=100315906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 100315936 . C . PASS END=100315936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:13,0 chr1 100315945 . A . PASS END=100315945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 100315958 . A . PASS END=100315958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 100315972 . G . PASS END=100315972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 100316599 . A . PASS END=100316626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:67:0,120,1800:0,177,255:40,0 chr1 100316627 . T . PASS END=100316681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:64:0,120,1800:0,168,255:40,0 chr1 100316684 . A . PASS END=100316684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 100318210 . G . PASS END=100318259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,164,255:40,0 chr1 100327028 . A . PASS END=100327251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:82:33:0,82,1105:0,82,255:40,0 chr1 100327252 . G . PASS END=100327252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1210:0,47,255:26,0 chr1 100327253 . T . PASS END=100327265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,90,255:30,0 chr1 100327266 . A . PASS END=100327269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,73,255:24,0 chr1 100327272 . A . PASS END=100327272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 100327811 . A . PASS END=100327974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:93:37:0,93,1395:0,98,255:40,0 chr1 100327975 . A . PASS END=100327980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,108,255:23,0 chr1 100329942 . G . PASS END=100330148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:87:39:0,87,1305:0,104,255:40,0 chr1 100335956 . C . PASS END=100336137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:35:0,101,1298:0,101,255:40,0 chr1 100336145 . T . PASS END=100336145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,111,1665:0,153,255:37,0 chr1 100336151 . G . PASS END=100336151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,108,1620:0,150,255:36,0 chr1 100336307 . T . PASS END=100336307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 100336311 . C . PASS END=100336311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 100336314 . T . PASS END=100336323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,112,1800:0,112,255:40,0 chr1 100336324 . A . PASS END=100336360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,149,255:40,0 chr1 100336361 . C T, 49.93 PASS DP=74;MQ=249.99;MQRankSum=6.981;ReadPosRankSum=4.137;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,36,0:0.486,0.000:74:17,16,0:21,20,0:48:85,0,50,1251,1350,2600:255,0,255:35,0:4.9925e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,22,13,23:21,17,21,15 chr1 100336362 . T . PASS END=100336398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:70:0,120,1800:0,197,255:40,0 chr1 100336399 . A . PASS END=100336426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:62:0,120,1800:0,157,255:40,0 chr1 100336437 . A . PASS END=100336437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,108,1620:0,160,255:36,0 chr1 100340170 . A . PASS END=100340170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 100340243 . A . PASS END=100340262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:83:0,120,1800:0,236,255:40,0 chr1 100340263 . T . PASS END=100340367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:87:51:0,87,1305:0,119,255:40,0 chr1 100340370 . T . PASS END=100340370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:45:0,87,1305:0,135,255:29,0 chr1 100340708 . A . PASS END=100340708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr1 100340710 . C . PASS END=100340749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,161,255:40,0 chr1 100340750 . C . PASS END=100340786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,171,255:40,0 chr1 100340787 . G A, 48.79 PASS DP=68;MQ=250.00;MQRankSum=7.034;ReadPosRankSum=4.144;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,30,0:0.441,0.000:68:20,17,0:18,13,0:47:84,0,50,1044,1314,2358:255,0,255:36,0:4.8786e+01,7.9212e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,17,15,15:23,15,18,12 chr1 100340788 . A . PASS END=100340813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,171,255:40,0 chr1 100340911 . C . PASS END=100340911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,154,255:40,0 chr1 100340914 . G . PASS END=100341011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:46:0,102,1530:0,129,255:40,0 chr1 100342002 . A . PASS END=100342002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr1 100342010 . A . PASS END=100342010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1263:0,99,255:33,0 chr1 100342012 . A . PASS END=100342012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1255:0,99,255:33,0 chr1 100342014 . G . PASS END=100342154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:39:0,107,1466:0,107,255:40,0 chr1 100342156 . A . PASS END=100342156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 100343190 . T . PASS END=100343190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 100343197 . G . PASS END=100343384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:38:0,90,1247:0,105,255:40,0 chr1 100343390 . G . PASS END=100343390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 100345471 . T . PASS END=100345471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 100345478 . G . PASS END=100345603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,102,1530:0,110,255:40,0 chr1 100345605 . A . PASS END=100345605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr1 100346188 . A . PASS END=100346351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:31:0,84,1260:0,89,255:40,0 chr1 100346360 . C . PASS END=100346360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 100346619 . T . PASS END=100346619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 100346630 . A . PASS END=100346630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 100346632 . C . PASS END=100346703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:66:0,120,1800:0,143,255:40,0 chr1 100346704 . A . PASS END=100346733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:77:0,120,1800:0,221,255:40,0 chr1 100346735 . T . PASS END=100346735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr1 100346738 . G . PASS END=100346738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr1 100346741 . T C, 47.19 PASS DP=76;MQ=250.00;MQRankSum=7.367;ReadPosRankSum=4.450;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,31,0:0.408,0.000:76:22,14,0:23,17,0:46:82,0,50,1098,1554,2652:255,0,255:40,0:4.7186e+01,1.0484e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,21,17,14:19,26,20,11 chr1 100346848 . A . PASS END=100347003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:42:0,110,1527:0,110,255:40,0 chr1 100347007 . A . PASS END=100347007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr1 100347095 . A . PASS END=100347247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:50:0,111,1734:0,111,255:40,0 chr1 100347251 . A . PASS END=100347251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 100349675 . G . PASS END=100349800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:62:0,120,1800:0,173,255:40,0 chr1 100349895 . C . PASS END=100350007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:63:0,115,1800:0,115,255:40,0 chr1 100350125 . A . PASS END=100350261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:46:0,103,1681:0,103,255:40,0 chr1 100353527 . T . PASS END=100353527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 100353532 . A . PASS END=100353532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1241:0,96,255:32,0 chr1 100353534 . T . PASS END=100353637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:32:0,91,1150:0,91,255:40,0 chr1 100353638 . C . PASS END=100353664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:40:0,96,1397:0,102,255:39,0 chr1 100356776 . G . PASS END=100356914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:67:0,120,1800:0,188,255:40,0 chr1 100357157 . T . PASS END=100357157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr1 100357160 . A . PASS END=100357178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:77:0,120,1800:0,221,255:40,0 chr1 100357179 . G . PASS END=100357297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:59:0,120,1800:0,144,255:40,0 chr1 100357983 . T . PASS END=100357983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1382:0,111,255:37,0 chr1 100357988 . C . PASS END=100358162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,113,1629:0,113,255:40,0 chr1 100358163 . G . PASS END=100358163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 100358166 . A . PASS END=100358166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr1 100361842 . G . PASS END=100361945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:84:38:0,84,1260:0,114,255:40,2 chr1 100361953 . G . PASS END=100361953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr1 100366191 . G . PASS END=100366198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr1 100366199 . A . PASS END=100366400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:28:0,84,1031:0,84,255:40,0 chr1 100366401 . T . PASS END=100366404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:39:0,90,1350:0,106,255:30,0 chr1 100366405 . T . PASS END=100366412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:36:0,63,945:0,78,255:26,0 chr1 100366413 . C . PASS END=100366414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:51:35:0,51,765:0,89,255:17,0 chr1 100366415 . C . PASS END=100366417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:39:32:0,39,585:0,72,255:13,0 chr1 100368225 . T . PASS END=100368225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 100368236 . C . PASS END=100368236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 100368238 . G . PASS END=100368346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:47:0,111,1680:0,111,255:40,0 chr1 100368347 . G . LowGQ END=100368347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,8:47:0:47:0,0,1119:28,0,255:33,0 chr1 100368348 . A . PASS END=100368349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,108,1629:0,108,255:39,0 chr1 100368350 . G . PASS END=100368350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,8:47:7:47:0,7,1036:0,7,255:30,0 chr1 100368356 . G . PASS END=100368356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,111,1665:0,115,255:36,0 chr1 100376268 . G . PASS END=100376404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:64:0,120,1800:0,173,255:40,0 chr1 100376406 . A . PASS END=100376407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 100377960 . G . PASS END=100378073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:50:0,120,1800:0,125,255:40,1 chr1 100379083 . G . PASS END=100379294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:36:0,90,1262:0,101,255:40,0 chr1 100380945 . G . PASS END=100381042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:84:50:0,84,1800:0,84,255:40,4 chr1 100381045 . A . PASS END=100381045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 100381047 . G . PASS END=100381047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 100381954 . A . PASS END=100381954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 100381966 . T . PASS END=100382054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:72:0,120,1800:0,173,255:40,0 chr1 100382145 . C . PASS END=100382145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,247,255:40,0 chr1 100382154 . G . PASS END=100382289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,146,255:40,0 chr1 100387090 . A . PASS END=100387208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:39:0,113,1437:0,113,255:40,0 chr1 100387290 . C . PASS END=100387290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr1 100387305 . A . PASS END=100387305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 100387312 . T . PASS END=100387312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 100387436 . A . PASS END=100387436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 100387464 . C . PASS END=100387464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 100387499 . A . PASS END=100387499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 100387602 . C . PASS END=100387602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 100387607 . T . PASS END=100387607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 100387768 . A . PASS END=100387768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 100387771 . T . PASS END=100387771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,114,1697:0,114,255:40,0 chr1 100387802 . A . PASS END=100387802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:57:0,120,1800:0,138,255:40,0 chr1 100387811 . A . PASS END=100387811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 100387822 . A . PASS END=100387822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr1 100387877 . A . PASS END=100387877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 100387887 . T . PASS END=100387887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 100387889 . A . PASS END=100387889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 100387905 . A . PASS END=100387905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr1 100388001 . A . PASS END=100388001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,175,255:40,0 chr1 100388039 . G . PASS END=100388039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 100388254 . A . PASS END=100388254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 100388282 . T . PASS END=100388282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 100388310 . A . PASS END=100388310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 100388431 . C . PASS END=100388431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 100388463 . A . PASS END=100388463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 100388566 . A . PASS END=100388566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 100388765 . T . PASS END=100388765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 100388817 . T . PASS END=100388817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 100388898 . A . PASS END=100388898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 100388927 . A . PASS END=100388927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 100388973 . G . PASS END=100388973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 100389024 . G . PASS END=100389024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 100389067 . G . PASS END=100389067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 100389159 . C . PASS END=100389159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 100389178 . T . PASS END=100389178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 100389265 . G . PASS END=100389265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 100389267 . T . PASS END=100389267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 100389367 . C . PASS END=100389367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 100436093 . A . PASS END=100436098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 100436099 . T . PASS END=100436099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 100436100 . C . PASS END=100436200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1119:0,89,255:40,0 chr1 100459093 . G . PASS END=100459261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:33:0,85,1087:0,85,255:40,0 chr1 100459262 . T . PASS END=100459262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1155:0,55,255:29,0 chr1 100459263 . A . PASS END=100459263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1087:0,82,255:30,0 chr1 100459264 . A . PASS END=100459264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr1 100459265 . T . PASS END=100459268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:31,0 chr1 100459269 . C . PASS END=100459271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr1 100459272 . C . PASS END=100459275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,82,255:28,0 chr1 100459276 . T . PASS END=100459292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,947:0,67,255:26,0 chr1 100459293 . C . PASS END=100459293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 100459294 . A . PASS END=100459295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 100459296 . C . PASS END=100459296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 100459297 . A . PASS END=100459302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 100464817 . A . PASS END=100464972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:43:0,108,1620:0,116,255:40,0 chr1 100472590 . G . PASS END=100472712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,128,255:40,0 chr1 100474844 . T . PASS END=100474846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1457:0,104,255:38,0 chr1 100476921 . T . PASS END=100477083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:33:0,92,1205:0,92,255:40,0 chr1 100477084 . A . PASS END=100477084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:34,0 chr1 100477085 . G . PASS END=100477090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:36,0 chr1 100480847 . C . PASS END=100480847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1166:0,45,255:35,2 chr1 100480858 . G . PASS END=100480997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:42:0,99,1555:0,99,255:40,0 chr1 100483238 . G . PASS END=100483375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:38:0,102,1530:0,114,255:40,0 chr1 100487932 . T . PASS END=100487932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 100487942 . T . PASS END=100488032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,134,255:40,0 chr1 100490261 . C . LowDepth;LowGQ END=100490262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 100490263 . C . PASS END=100490296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 100490297 . C . PASS END=100490315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:5,0 chr1 100490316 . G . PASS END=100490316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 100490317 . G . PASS END=100490325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 100490326 . A . PASS END=100490326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 100490327 . C . PASS END=100490349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,380:0,33,255:13,0 chr1 100490350 . T . PASS END=100490350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 100490351 . A . PASS END=100490364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 100490365 . T . PASS END=100490365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 100490366 . T . PASS END=100490386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 100490387 . A . PASS END=100490387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 100490388 . A . PASS END=100490395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 100492698 . C . PASS END=100492725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,92,255:36,0 chr1 100492726 . G . PASS END=100492742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:26,0 chr1 100492743 . C . PASS END=100492744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 100492745 . T . PASS END=100492747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 100492748 . C . PASS END=100492748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 100492749 . T . PASS END=100492751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 100492752 . A . PASS END=100492767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:16:0,48,553:0,48,255:16,0 chr1 100503789 . A . PASS END=100503794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 100503795 . C . PASS END=100503795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 100503796 . A . PASS END=100503799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 100503800 . G . PASS END=100503800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:30,0 chr1 100503801 . A . PASS END=100503801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:30,0 chr1 100503802 . A . PASS END=100503802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 100503803 . G . PASS END=100503872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:31:0,87,1128:0,91,255:39,0 chr1 100508629 . A . PASS END=100508652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:66:0,120,1800:0,198,255:40,0 chr1 100508653 . C . PASS END=100508726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:91:0,120,1800:0,227,255:40,0 chr1 100508768 . A . PASS END=100508785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:114:0,120,1800:0,255,255:40,0 chr1 100515465 . C . PASS END=100515560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:38:0,99,1435:0,99,255:40,0 chr1 100524222 . G . PASS END=100524284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:98:0,120,1800:0,251,255:40,0 chr1 100525434 . G . PASS END=100525435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,114,1710:0,117,255:39,0 chr1 100525436 . T . PASS END=100525436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,986:0,53,255:35,0 chr1 100525437 . T . PASS END=100525560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:36:0,84,1260:0,92,255:40,0 chr1 100525561 . G . PASS END=100525561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 100527391 . G . PASS END=100527505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:64:0,120,1800:0,158,255:40,0 chr1 100533533 . G . PASS END=100533550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr1 100533551 . G . PASS END=100533554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 100533555 . G . PASS END=100533557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 100533558 . T . PASS END=100533558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 100533559 . A . PASS END=100533668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1164:0,83,255:35,0 chr1 100533669 . C . PASS END=100533669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:28,0 chr1 100533670 . T . PASS END=100533676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:29,0 chr1 100533677 . G . PASS END=100533687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,76,255:26,0 chr1 100533688 . T . PASS END=100533688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,781:0,42,255:25,0 chr1 100533689 . G . PASS END=100533696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,881:0,78,255:26,0 chr1 100533697 . G . PASS END=100533697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,689:0,44,255:24,0 chr1 100533698 . C . PASS END=100533703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,895:0,78,255:26,0 chr1 100533704 . G . PASS END=100533704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,717:0,44,255:19,0 chr1 100533705 . C . PASS END=100533706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr1 100533707 . T . PASS END=100533707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:18,0 chr1 100533708 . C . PASS END=100533714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 100533715 . A . PASS END=100533715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:20,0 chr1 100533716 . G . PASS END=100533717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,670:0,24,255:16,0 chr1 100533718 . A . PASS END=100533727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:16,0 chr1 100533728 . T . PASS END=100533728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,548:0,26,255:16,0 chr1 100533729 . G . PASS END=100533736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 100533737 . G . PASS END=100533737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 100533738 . C . PASS END=100533740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 100533741 . A . PASS END=100533742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 100533743 . C . PASS END=100533743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 100533744 . C . PASS END=100533744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 100533745 . T . PASS END=100533748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 100533749 . G . PASS END=100533749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 100533750 . C . PASS END=100533750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 100533751 . G . PASS END=100533751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 100534029 . T . PASS END=100534140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1235:0,95,255:40,0 chr1 100534141 . A . PASS END=100534142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 100535170 . A . PASS END=100535241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:57:0,120,1800:0,138,255:40,0 chr1 100542721 . A . PASS END=100542748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:47:0,120,1800:0,125,255:40,0 chr1 100542749 . C . PASS END=100542833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:53:0,120,1800:0,149,255:40,0 chr1 100544007 . G . PASS END=100544008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr1 100544009 . T . PASS END=100544009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 100544010 . G . PASS END=100544104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:30:0,87,1180:0,89,255:40,0 chr1 100546052 . G . PASS END=100546207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:98:38:0,98,1380:0,98,255:40,0 chr1 100546208 . T . PASS END=100546215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,105,1575:0,123,255:40,0 chr1 100547559 . A . PASS END=100547560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 100547561 . T . PASS END=100547563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:13,0 chr1 100547564 . C . PASS END=100547577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,498:0,41,255:19,0 chr1 100547578 . C . PASS END=100547598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:21,0 chr1 100547599 . G . PASS END=100547707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:29:0,83,1150:0,83,255:36,0 chr1 100547708 . T . PASS END=100547724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,81,255:26,0 chr1 100547725 . G . PASS END=100547747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 100547748 . C . PASS END=100547749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:12,0 chr1 100547750 . G . PASS END=100547754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 100547755 . C . PASS END=100547765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 100550884 . T . PASS END=100550990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:37:0,83,1485:0,83,255:40,0 chr1 100551090 . A . PASS END=100551090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 100551092 . C . PASS END=100551186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,109,1755:0,109,255:40,0 chr1 100553695 . T . PASS END=100553792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:97:38:0,97,1202:0,97,255:40,0 chr1 100568511 . C . PASS END=100568624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,102,1530:0,113,255:40,0 chr1 100568625 . C . PASS END=100568627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:37:0,63,945:0,111,255:24,0 chr1 100568628 . T . PASS END=100568639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:51:23:0,51,765:0,69,255:19,0 chr1 100571323 . C . PASS END=100571459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:38:0,84,1304:0,84,255:40,0 chr1 100572468 . A . PASS END=100572549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:111:0,120,1800:0,255,255:40,0 chr1 100572930 . C . PASS END=100572930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,99,1485:0,101,255:33,0 chr1 100572931 . T . PASS END=100572932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:39:0,65,1357:0,65,255:34,0 chr1 100572933 . T . PASS END=100573109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:90:37:0,90,1450:0,90,255:40,0 chr1 100573184 . C . PASS END=100573273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,162,255:40,0 chr1 100573366 . C . PASS END=100573548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:43:0,87,1305:0,129,255:40,0 chr1 100573549 . C . PASS END=100573554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:63:39:0,63,945:0,79,255:21,0 chr1 100573555 . T . PASS END=100573560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:29:0,48,720:0,87,255:19,0 chr1 100575848 . C . PASS END=100575895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:37:0,84,1349:0,84,255:40,0 chr1 100575896 . T . PASS END=100575932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:63:0,120,1800:0,134,255:40,0 chr1 100575933 . G A, 48.12 PASS DP=69;MQ=250.00;MQRankSum=7.006;ReadPosRankSum=1.798;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,29,0:0.426,0.000:68:21,19,0:18,10,0:47:83,0,50,1037,1395,2432:255,0,255:38,0:4.8119e+01,8.8790e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,21,15,14:16,23,13,16 chr1 100575934 . C . PASS END=100575970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:69:0,120,1800:0,175,255:40,0 chr1 100575971 . G . PASS END=100576036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:40:0,81,1215:0,120,255:40,0 chr1 100576037 . T . PASS END=100576039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:40:0,72,1080:0,120,255:26,0 chr1 100584574 . C . PASS END=100584663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:39:0,96,1374:0,96,255:40,0 chr1 100584664 . A . PASS END=100584664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:35,0 chr1 100584665 . T . PASS END=100584693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:36:0,83,1238:0,83,255:37,0 chr1 100585950 . C . PASS END=100586015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,177,255:40,0 chr1 100586934 . C . PASS END=100587105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:38:0,98,1388:0,98,255:40,0 chr1 100587936 . C . PASS END=100588040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,150,255:40,0 chr1 100588766 . C . PASS END=100588845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:61:0,120,1800:0,134,255:40,0 chr1 100588858 . T . PASS END=100588858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 100591438 . C . PASS END=100591498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,166,255:40,0 chr1 100598306 . C . PASS END=100598370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1263:0,87,255:40,0 chr1 100598725 . A . PASS END=100598747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,980:0,81,255:32,0 chr1 100598748 . G . PASS END=100598748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 100598749 . C . PASS END=100598768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1148:0,85,255:36,0 chr1 100598769 . T . PASS END=100598769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr1 100598770 . G . PASS END=100598823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,104,1441:0,104,255:40,0 chr1 100598824 . G . PASS END=100598865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1147:0,90,255:40,0 chr1 100598866 . G A, 141.22 PASS DP=33;MQ=249.79;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,33,0:1.000,0.000:33:0,16,0:0,17,0:91:179,94,0,279,279,279:255,99,0:0,0:1.4122e+02,9.1219e+01,0.0000e+00,2.7599e+02,3.1076e+02,2.7900e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,22:0,0,22,11:100598866 chr1 100598867 . C T, 141.55 PASS DP=33;MQ=249.79;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,33,0:1.000,0.000:33:0,16,0:0,17,0:92:179,95,0,279,279,279:255,99,0:0,0:1.4155e+02,9.1548e+01,0.0000e+00,2.7632e+02,3.1109e+02,2.7933e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,22:0,0,22,11:100598866 chr1 100598868 . G . PASS END=100598868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 100598869 . G . PASS END=100598871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:26,0 chr1 100602438 . G . PASS END=100602484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:77:0,120,1800:0,193,255:40,0 chr1 100602575 . C . PASS END=100602641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,4:112:99:101:0,120,1800:0,255,255:40,0 chr1 100605205 . G . PASS END=100605267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:85:0,120,1800:0,222,255:40,0 chr1 100605738 . G . PASS END=100605807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:79:0,120,1800:0,213,255:40,0 chr1 100605964 . G . PASS END=100606097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:66:0,120,1800:0,165,255:40,0 chr1 100606408 . G . PASS END=100606575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,107,1474:0,107,255:40,0 chr1 100608693 . G . PASS END=100608765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:75:0,120,1800:0,218,255:40,0 chr1 100609625 . A . PASS END=100609699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,192,255:40,0 chr1 100613450 . A . PASS END=100613581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,129,255:40,2 chr1 100613582 . A . PASS END=100613582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:74:59:0,74,1901:0,74,255:40,2 chr1 100613583 . A . PASS END=100613882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,121,255:40,0 chr1 100614181 . G . PASS END=100614363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1291:0,81,255:40,0 chr1 100614364 . A . PASS END=100614364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:35,0 chr1 100614365 . A . PASS END=100614376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1286:0,92,255:36,0 chr1 100614598 . T . PASS END=100614653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:82:0,120,1800:0,226,255:40,0 chr1 100614924 . T . PASS END=100614991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:69:0,120,1800:0,174,255:40,0 chr1 100617941 . C . PASS END=100618080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:35:0,100,1282:0,100,255:40,0 chr1 100620607 . C . PASS END=100620759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:90:38:0,90,1394:0,90,255:40,0 chr1 100621728 . C . PASS END=100621873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:31:0,83,1149:0,83,255:40,0 chr1 100623787 . C . PASS END=100623923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:39:0,86,1382:0,86,255:40,0 chr1 100624815 . C . PASS END=100624971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:39:0,114,1381:0,114,255:40,0 chr1 100626022 . C . PASS END=100626127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:47:0,93,1395:0,109,255:40,1 chr1 100633960 . T . PASS END=100634072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:63:0,120,1800:0,142,255:40,0 chr1 100652581 . A . PASS END=100652581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr1 100652583 . G . PASS END=100652583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr1 100652654 . A . PASS END=100652654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr1 100652688 . T . PASS END=100652688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 100652706 . T . PASS END=100652706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 100652753 . G . PASS END=100652753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 100652911 . T . PASS END=100652911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 100652981 . A . PASS END=100652981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 100653077 . T . PASS END=100653077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 100653340 . A . PASS END=100653340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 100653426 . T . PASS END=100653426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1341:0,98,255:35,0 chr1 100653536 . T . PASS END=100653536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 100653585 . C . PASS END=100653585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 100653693 . A . PASS END=100653693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 100653728 . G . PASS END=100653728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 100653731 . G . PASS END=100653731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 100653737 . C . PASS END=100653738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 100653869 . C . PASS END=100653869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr1 100654121 . A . PASS END=100654121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 100654342 . A . PASS END=100654342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1291:0,78,255:38,0 chr1 100654442 . C . PASS END=100654442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 100654588 . G . PASS END=100654588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 100654624 . C . PASS END=100654624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 100654907 . TAAAAA TAAA,TAAAA,TA,T, 89.19 PASS DP=25;MQ=247.64;MQRankSum=1.410;ReadPosRankSum=0.366;FractionInformativeReads=0.960;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:2,8,11,2,1,0:0.333,0.458,0.083,0.042,0.000:24:2,5,8,0,1,0:0,3,3,2,0,0:19:97,43,27,56,0,21,108,55,29,83,133,66,44,248,98,67,24,14,89,104,51:255,0,145:3,29:8.9186e+01,3.9186e+01,2.6192e+01,5.1569e+01,6.1556e-02,1.9871e+01,1.0395e+02,5.4985e+01,2.9362e+01,8.2362e+01,1.2898e+02,6.5779e+01,4.3567e+01,2.4826e+02,9.6567e+01,9.3738e+01,5.4783e+01,4.4846e+01,1.1969e+02,1.3472e+02,8.0433e+01:0.00,4.00,7.00,4.00,8.00,7.00,4.00,8.00,8.00,7.00,4.00,8.00,8.00,8.00,7.00,34.77,38.77,38.77,38.77,38.77,37.77:1,1,15,7:1,1,13,9 chr1 100654909 . A . LowGQ END=100654910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,28:33:0:30:0,0,0:255,0,87:15,16 chr1 100655040 . T . PASS END=100655040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 100655398 . G . PASS END=100655398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 100655541 . T . PASS END=100655541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 100655695 . T . PASS END=100655695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 100655852 . T . PASS END=100655852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 100655934 . C . PASS END=100655934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 100655936 . A . PASS END=100655936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 100656027 . A . PASS END=100656027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 100656173 . G . PASS END=100656173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 100656220 . A . PASS END=100656220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr1 100656250 . T . PASS END=100656250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 100656431 . C . PASS END=100656431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 100656483 . G . PASS END=100656483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 100656947 . G . PASS END=100656947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 100657123 . C . PASS END=100657123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 100657235 . C . PASS END=100657235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 100657386 . G . PASS END=100657386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 100657434 . G . PASS END=100657434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 100657490 . C . LowGQ END=100657490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,860:3,0,255:17,0 chr1 100657498 . C . PASS END=100657498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,945:0,71,255:21,0 chr1 100657520 . G . PASS END=100657520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 100657529 . T . PASS END=100657529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 100657561 . G . PASS END=100657561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 100657574 . T . PASS END=100657574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr1 100657687 . G . PASS END=100657687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 100657816 . C . PASS END=100657816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 100657952 . A . PASS END=100657952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 100658022 . T . PASS END=100658022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 100658118 . G . PASS END=100658118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 100658159 . C . PASS END=100658159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 100658225 . T . PASS END=100658225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 100658290 . C . PASS END=100658290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 100658350 . T . PASS END=100658350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 100658356 . G . PASS END=100658356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 100658472 . A . PASS END=100658472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1217:0,96,255:32,0 chr1 100658566 . C . PASS END=100658566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 100658571 . A . PASS END=100658571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr1 100658610 . C . PASS END=100658610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 100658624 . G . PASS END=100658624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 100658676 . C . PASS END=100658676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 100658784 . T . PASS END=100658784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 100658789 . C . PASS END=100658789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 100658960 . G . PASS END=100658960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 100658989 . A . PASS END=100658989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 100659540 . T . PASS END=100659540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr1 100659598 . A . PASS END=100659598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr1 100659681 . C . PASS END=100659681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 100659692 . C . PASS END=100659692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 100659697 . A . PASS END=100659697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr1 100659719 . T . PASS END=100659719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1398:0,114,255:38,0 chr1 100659723 . T . PASS END=100659723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1427:0,114,255:38,0 chr1 100659737 . T . PASS END=100659737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 100659790 . G . PASS END=100659790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 100660479 . A . PASS END=100660479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr1 100660489 . G . PASS END=100660489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,229,255:40,0 chr1 100660746 . A . PASS END=100660746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:54:0,107,1945:0,107,255:40,2 chr1 100660893 . C . PASS END=100660893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr1 100661089 . G . PASS END=100661089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr1 100661125 . C . PASS END=100661125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,246,255:40,0 chr1 100661169 . A . PASS END=100661169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,238,255:40,0 chr1 100661176 . G . PASS END=100661176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,217,255:40,0 chr1 100661747 . T . PASS END=100661747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 100661811 . T . PASS END=100661936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:59:0,112,1800:0,112,255:40,0 chr1 100661937 . T . PASS END=100661937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:99:60:0,120,1800:0,130,255:40,0 chr1 100661938 . G . PASS END=100661938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:71:60:0,71,1963:0,71,255:39,0 chr1 100661939 . C . PASS END=100661942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:81:59:0,81,1530:0,81,255:39,0 chr1 100661943 . A . PASS END=100661943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:74:59:0,74,1872:0,74,255:33,0 chr1 100661944 . T . PASS END=100661946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:89:59:0,89,1530:0,89,255:33,0 chr1 100661947 . A . PASS END=100661948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:60:56:0,60,1659:0,60,255:31,0 chr1 100661949 . T . PASS END=100661950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:90:53:0,90,1350:0,118,255:30,0 chr1 100661951 . C . PASS END=100661951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:70:53:0,70,1660:0,70,255:29,0 chr1 100661952 . T . PASS END=100661952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:90:48:0,90,1350:0,111,255:29,0 chr1 100661953 . C . PASS END=100661953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1553:0,72,255:29,0 chr1 100661954 . C . PASS END=100661954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,6:48:22:48:0,22,1388:0,22,255:28,0 chr1 100661955 . T . PASS END=100661955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:90:47:0,90,1350:0,125,255:30,0 chr1 100661956 . T . PASS END=100661957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:72:47:0,72,1080:0,86,255:24,0 chr1 100661958 . C . PASS END=100661958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:21:46:0,21,1196:0,21,255:22,0 chr1 100661959 . T . PASS END=100661959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:44:46:0,44,1476:0,44,255:23,0 chr1 100661960 . G . PASS END=100661960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:72:46:0,72,1080:0,88,255:22,0 chr1 100661961 . G . LowGQ END=100661961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:0:46:0,0,1285:17,0,255:22,0 chr1 100661962 . T . PASS END=100661963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,990:0,88,255:23,0 chr1 100661964 . A . PASS END=100661965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:43:46:0,43,1346:0,43,255:20,0 chr1 100661966 . A . LowGQ END=100661966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:46:0,0,1299:36,0,255:19,0 chr1 100661967 . T . PASS END=100661967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:54:46:0,54,810:0,83,255:17,0 chr1 100661968 . C . PASS END=100661968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:6:44:0,6,1090:0,6,255:14,0 chr1 100661969 . G . PASS END=100661969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:15:39:0,15,1246:0,15,255:14,0 chr1 100661970 . G . LowGQ END=100661972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:0:39:0,0,1028:0,0,255:13,0 chr1 100661973 . A . PASS END=100661973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:31:38:0,31,1017:0,31,255:12,0 chr1 100661974 . A . LowGQ END=100661975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:0:38:0,0,922:36,0,255:9,0 chr1 100661976 . G . PASS END=100661977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:21:38:0,21,315:0,66,255:8,1 chr1 100661978 . C . LowGQ END=100661979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:0:37:0,0,860:0,0,255:3,1 chr1 100661982 . G . LowGQ END=100661982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,732:24,0,255:4,1 chr1 100661987 . GAAAAAAAA GAAA,GA,GAAAA,G, 102.88 PASS DP=26;MQ=249.51;MQRankSum=1.419;ReadPosRankSum=0.315;FractionInformativeReads=0.846;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,10,4,5,2,0:0.455,0.182,0.227,0.091,0.000:22:0,4,3,3,1,0:1,6,1,2,1,0:4:107,54,0,125,2,52,116,14,25,58,194,19,134,50,69,294,294,294,294,294,294:255,0,154:1,25:1.0288e+02,5.2878e+01,2.2947e+00,1.2465e+02,4.2327e+00,5.4233e+01,1.1535e+02,1.6244e+01,2.7121e+01,6.0295e+01,1.9282e+02,2.1306e+01,1.3674e+02,5.2654e+01,7.1306e+01,3.2459e+02,3.2759e+02,3.2759e+02,3.2759e+02,3.2759e+02,3.2760e+02:0.00,3.00,6.01,3.00,6.00,6.01,3.00,6.00,6.00,6.01,3.00,6.00,6.00,6.00,6.01,34.77,37.77,37.77,37.77,37.77,37.78:1,0,7,14:0,1,15,6 chr1 100671781 . T . PASS END=100671781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1412:0,111,255:37,0 chr1 100671785 . C . PASS END=100671817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1627:0,119,255:40,0 chr1 100671818 . C . PASS END=100671857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:44:0,87,1305:0,109,255:40,0 chr1 100671860 . A . PASS END=100671860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:21:43:0,21,1329:0,21,255:26,5 chr1 100671866 . TA T,TAA,AA, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.026;ReadPosRankSum=0.642;FractionInformativeReads=0.949;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/3:14,3,2,18,0:0.081,0.054,0.486,0.000:37:6,2,1,11,0:8,1,1,7,0:46:85,240,182,220,343,173,0,101,91,44,443,443,443,443,443:255,0,255:15,7:5.0000e+01,2.1662e+02,1.6165e+02,1.9662e+02,3.3010e+02,1.5212e+02,1.2244e-04,1.1165e+02,1.0212e+02,4.7403e+01,4.4251e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.4552e+02:0.00,11.00,14.01,11.00,22.00,14.01,34.77,45.77,45.77,37.78,34.77,45.77,45.77,69.54,37.78:5,9,12,11:11,3,11,12 chr1 100672000 . C . PASS END=100672022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1305:0,90,255:39,0 chr1 100672023 . A . PASS END=100672059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,109,1391:0,109,255:40,0 chr1 100672060 . T C, 215.09 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,27,0:0,29,0:165:253,168,0,2142,168,2142:255,168,0:0,0:2.1509e+02,1.6509e+02,0.0000e+00,4.5000e+02,1.9986e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,29:0,0,30,26 chr1 100672061 . C . PASS END=100672097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,127,255:40,0 chr1 100672098 . G . PASS END=100672170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:35:0,81,1215:0,94,255:40,0 chr1 100672171 . C . PASS END=100672187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,61,255:25,0 chr1 100672188 . G . PASS END=100672192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 100672742 . T . PASS END=100672742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 100676248 . A . PASS END=100676248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,99,1541:0,99,255:40,0 chr1 100676250 . C . PASS END=100676327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,153,255:40,0 chr1 100676657 . T . PASS END=100676680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,170,255:40,0 chr1 100680373 . C . PASS END=100680512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:81:38:0,81,1390:0,81,255:40,0 chr1 100680513 . T . PASS END=100680513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1150:0,53,255:27,0 chr1 100680514 . A . PASS END=100680514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,91,255:28,0 chr1 100680515 . G . PASS END=100680516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1097:0,74,255:27,0 chr1 100680517 . C . PASS END=100680518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:36:0,87,1305:0,91,255:29,0 chr1 100680519 . T . PASS END=100680520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:69:36:0,69,1210:0,69,255:29,0 chr1 100680521 . A . PASS END=100680523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,92,255:29,0 chr1 100680524 . A . PASS END=100680524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 100680525 . T . PASS END=100680525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 100680526 . T . PASS END=100680527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1005:0,62,255:27,0 chr1 100680528 . C . LowGQ END=100680528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:0:31:0,0,817:16,0,255:23,0 chr1 100680529 . T . PASS END=100680537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,980:0,60,255:26,0 chr1 100680538 . G . PASS END=100680538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:23,0 chr1 100680539 . C . PASS END=100680539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:23,0 chr1 100680541 . T . PASS END=100680541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:24,0 chr1 100681539 . C . PASS END=100681746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:31:0,82,1111:0,82,255:40,0 chr1 100681747 . C . PASS END=100681755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:23,0 chr1 100684181 . C . PASS END=100684299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:31:0,86,1219:0,86,255:40,0 chr1 100684300 . G . PASS END=100684304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 100684306 . G . PASS END=100684306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 100696288 . C . PASS END=100696288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 100696289 . C . PASS END=100696289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr1 100696290 . T . PASS END=100696470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:82:38:0,82,1335:0,82,255:40,0 chr1 100700992 . C . PASS END=100701067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,102,1305:0,104,255:40,0 chr1 100706317 . C . PASS END=100706440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:43:0,113,1529:0,113,255:40,0 chr1 100715321 . C . PASS END=100715321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 100715325 . C . PASS END=100715376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:44:0,82,1285:0,82,255:40,0 chr1 100715416 . A . PASS END=100715416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:21,0 chr1 100731932 . A . PASS END=100731932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr1 100731933 . T . PASS END=100731934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 100731935 . G . PASS END=100731935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 100731936 . C . PASS END=100731936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 100731937 . G . PASS END=100731937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 100731938 . G . PASS END=100731938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 100731939 . G . PASS END=100731939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 100731940 . G . PASS END=100731940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 100731941 . C . PASS END=100731951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:29,0 chr1 100731952 . G . PASS END=100731952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 100731953 . G . PASS END=100731956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1132:0,93,255:31,0 chr1 100731957 . A . PASS END=100731958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 100731959 . G . PASS END=100731964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr1 100731965 . A . PASS END=100731965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:31,0 chr1 100731966 . T . PASS END=100731969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1217:0,86,255:32,0 chr1 100731970 . G . PASS END=100731970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:30,0 chr1 100731971 . G . PASS END=100731971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:30,0 chr1 100731972 . A . PASS END=100731972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1178:0,69,255:29,0 chr1 100731973 . A . PASS END=100731976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1225:0,86,255:30,0 chr1 100732080 . G . PASS END=100732090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr1 100732091 . C . PASS END=100732095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 100732096 . G . PASS END=100732098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 100732099 . T . PASS END=100732099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,931:0,57,255:26,0 chr1 100732100 . C . PASS END=100732101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 100732102 . C . PASS END=100732102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 100732103 . T . PASS END=100732117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1111:0,82,255:32,0 chr1 100732118 . T . PASS END=100732178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,894:0,62,255:26,0 chr1 100732179 . A . PASS END=100732179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:19,0 chr1 100732180 . G . PASS END=100732181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 100732182 . T . PASS END=100732183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,798:0,53,255:19,0 chr1 100732184 . A . PASS END=100732184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 100733056 . T . PASS END=100733094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,1:115:99:109:0,120,1800:0,255,255:40,0 chr1 100733708 . G . PASS END=100733844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1153:0,80,255:40,0 chr1 100733845 . C . PASS END=100733849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,96,255:26,0 chr1 100733850 . G . PASS END=100733851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:57:32:0,57,855:0,96,255:19,0 chr1 100736113 . G . PASS END=100736236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:97:45:0,97,1627:0,97,255:40,0 chr1 100738950 . G . PASS END=100739008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:88:0,120,1800:0,237,255:40,0 chr1 100740380 . G . PASS END=100740521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:91:41:0,91,1467:0,91,255:40,0 chr1 100741155 . G . PASS END=100741279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:36:0,92,1332:0,92,255:40,0 chr1 100742814 . A . PASS END=100742872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,138,255:40,0 chr1 100750784 . G . PASS END=100750785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,210,255:40,0 chr1 100750786 . G . PASS END=100750878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:42:0,114,1710:0,126,255:40,0 chr1 100752655 . C . PASS END=100752759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:40:0,87,1305:0,115,255:40,0 chr1 100756959 . G . PASS END=100757060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,178,255:40,0 chr1 100817313 . A . PASS END=100817364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:52:0,120,1800:0,123,255:40,0 chr1 100818511 . A . PASS END=100818529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 100818530 . A . PASS END=100818541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 100818542 . C . PASS END=100818542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 100818543 . T . PASS END=100818555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr1 100818556 . A . PASS END=100818556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 100818557 . A . PASS END=100818557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 100818558 . A . PASS END=100818559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 100819318 . A . PASS END=100819386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:48:0,120,1800:0,127,255:40,0 chr1 100819387 . A . PASS END=100819408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,120,1800:0,141,255:40,0 chr1 100828678 . A . PASS END=100828682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 100828683 . C . PASS END=100828688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 100828689 . A . PASS END=100828692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 100828693 . G . PASS END=100828717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:17,0 chr1 100828718 . C . PASS END=100828718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 100828719 . A . PASS END=100828720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 100828721 . T . PASS END=100828721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 100828722 . G . PASS END=100828752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,574:0,44,255:16,0 chr1 100828753 . G . PASS END=100828753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 100828754 . C . PASS END=100828755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 100828756 . G . PASS END=100828756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:11,0 chr1 100828757 . C . PASS END=100828781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 100843102 . T . PASS END=100843177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:62:0,120,1800:0,177,255:40,0 chr1 100849022 . C . PASS END=100849039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,554:0,51,255:17,0 chr1 100849040 . A . PASS END=100849040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 100849041 . G . PASS END=100849043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 100849044 . T . PASS END=100849044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr1 100849045 . T . PASS END=100849075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,825:0,72,255:26,0 chr1 100849076 . G . PASS END=100849082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:29,0 chr1 100849083 . T . PASS END=100849083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 100849084 . C . PASS END=100849091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr1 100849092 . C . PASS END=100849118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,834:0,75,255:26,0 chr1 100849119 . G . PASS END=100849119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 100849120 . C . PASS END=100849128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 100849129 . T . PASS END=100849129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:23,0 chr1 100849130 . G . PASS END=100849140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 100849141 . T . PASS END=100849162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,630:0,40,255:19,0 chr1 100849163 . T . PASS END=100849178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 100849179 . G . PASS END=100849182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:8,0 chr1 100849183 . T . PASS END=100849193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:9:0,15,225:0,27,255:6,0 chr1 100849194 . C . PASS END=100849196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 100856288 . T . PASS END=100856380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,129,255:40,0 chr1 100889778 . G . PASS END=100889857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,106,1482:0,106,255:40,1 chr1 100905488 . G . PASS END=100905554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,139,255:40,0 chr1 100908490 . G . PASS END=100908552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:82:0,120,1800:0,213,255:40,0 chr1 100920961 . C . PASS END=100921048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:38:0,88,1442:0,88,255:40,0 chr1 100928207 . G . PASS END=100928416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:33:0,80,1327:0,80,255:40,0 chr1 100928417 . C . PASS END=100928437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:26,0 chr1 100933509 . C . PASS END=100933509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 100933512 . C . PASS END=100933513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 100933514 . G . PASS END=100933515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 100933516 . T . PASS END=100933521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 100933522 . A . PASS END=100933650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1215:0,81,255:40,0 chr1 100946506 . A . PASS END=100946638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:36:0,82,1283:0,82,255:40,0 chr1 100949848 . A . PASS END=100949854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1061:0,85,255:32,0 chr1 100949855 . G . PASS END=100949855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1038:0,74,255:33,0 chr1 100949856 . C . PASS END=100950022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:92:35:0,92,1286:0,92,255:40,0 chr1 100951382 . G . PASS END=100951420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,154,255:40,0 chr1 100960374 . G . PASS END=100960486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,103,1376:0,103,255:40,0 chr1 100961558 . G . PASS END=100961605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,124,255:40,0 chr1 100963641 . A . PASS END=100963763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:98:40:0,98,1382:0,98,255:40,0 chr1 100964485 . C . PASS END=100964500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:26,0 chr1 100964501 . C . PASS END=100964560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:32,0 chr1 100964561 . A . PASS END=100964562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,936:0,62,255:27,0 chr1 100964563 . C . PASS END=100964563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,866:0,56,255:26,0 chr1 100964564 . T . PASS END=100964569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 100964570 . T . PASS END=100964588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,945:0,62,255:26,0 chr1 100964589 . C . PASS END=100964590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 100964591 . G . PASS END=100964616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr1 100964617 . T . PASS END=100964632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 100964633 . A . PASS END=100964633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,915:0,54,255:26,0 chr1 100964634 . C . PASS END=100964640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,1080:0,74,255:25,0 chr1 100964641 . A . PASS END=100964642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:27,0 chr1 100964643 . A . PASS END=100964646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 100964647 . C . PASS END=100964667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1188:0,85,255:30,0 chr1 100964668 . G . PASS END=100964668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1194:0,53,255:32,0 chr1 100964669 . T . PASS END=100964674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:34,0 chr1 100964675 . A . PASS END=100964675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:31,0 chr1 100964676 . G . PASS END=100964681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 100964682 . G . PASS END=100964682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr1 100964683 . C . PASS END=100964935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1235:0,81,255:40,0 chr1 100970370 . T . PASS END=100970383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,190,255:40,0 chr1 100970384 . G . PASS END=100970447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:66:0,120,1800:0,162,255:40,2 chr1 100983807 . T . PASS END=100983855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,200,255:40,0 chr1 101004523 . A . PASS END=101004535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 101004536 . C . PASS END=101004545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:11,0 chr1 101004546 . C . PASS END=101004546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 101004547 . A . PASS END=101004549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 101004550 . T . PASS END=101004550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 101004551 . C . PASS END=101004558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:12,0 chr1 101004559 . A . PASS END=101004559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 101004560 . C . PASS END=101004562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 101004563 . G . PASS END=101004563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 101004564 . T . PASS END=101004600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr1 101004601 . T . PASS END=101004601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 101004602 . G . PASS END=101004602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 101004603 . G . PASS END=101004603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 101004604 . G . PASS END=101004625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 101004626 . C . PASS END=101004626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 101004627 . A . PASS END=101004627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 101004628 . C . PASS END=101004632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 101004633 . G . PASS END=101004648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 101004649 . A . PASS END=101004679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 101004680 . T . LowGQ END=101004680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:6,0 chr1 101004681 . C . PASS END=101004690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:8,0 chr1 101004691 . T . PASS END=101004691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 101004692 . C . PASS END=101004693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 101004694 . T . PASS END=101004694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 101004695 . C . PASS END=101004700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 101004701 . G . PASS END=101004701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 101004702 . A . PASS END=101004708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 101004709 . C . PASS END=101004709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 101004710 . A . PASS END=101004729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 101004730 . A . LowGQ END=101004730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:7,0 chr1 101004731 . T . PASS END=101004736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 101004737 . A . PASS END=101004737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:6,0 chr1 101004738 . C . PASS END=101004751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 101004752 . A . PASS END=101004752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr1 101004753 . C . PASS END=101004754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 101004755 . T . PASS END=101004755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 101004756 . C . PASS END=101004756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 101004757 . A . LowGQ END=101004757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr1 101004758 . G . PASS END=101004763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 101004764 . G . PASS END=101004764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 101004765 . C . PASS END=101004766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 101004767 . C . PASS END=101004768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 101004769 . C . PASS END=101004781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 101004782 . A . PASS END=101004782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 101004783 . G . PASS END=101004783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 101004784 . G . PASS END=101004787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 101004788 . C . PASS END=101004798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 101004799 . C . PASS END=101004822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 101004823 . C . PASS END=101004823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 101004824 . C . PASS END=101004824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 101004825 . C . PASS END=101004826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 101004827 . C . PASS END=101004827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 101004828 . C . PASS END=101004831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 101004832 . G . PASS END=101004899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 101004900 . G . PASS END=101004907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 101004908 . T . PASS END=101004922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 101004923 . T . PASS END=101004924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 101004925 . G . PASS END=101004926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 101004927 . C . PASS END=101004927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr1 101004928 . C . PASS END=101004959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:13,0 chr1 101004960 . C . PASS END=101004964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 101004965 . C . PASS END=101004971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 101004972 . G . PASS END=101004972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 101004973 . G . PASS END=101004973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 101004974 . C . PASS END=101004974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 101004975 . G . PASS END=101004975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 101004976 . C . PASS END=101004977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 101004978 . G . LowGQ END=101004978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,418:10,0,255:12,0 chr1 101004979 . T . PASS END=101004987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 101004988 . C . PASS END=101004988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 101004989 . G . PASS END=101004993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 101004994 . A . PASS END=101004994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 101004995 . C . PASS END=101005002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 101005003 . A . PASS END=101005003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 101005004 . T . PASS END=101005014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr1 101005015 . T . PASS END=101005015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 101005016 . C . PASS END=101005017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 101005018 . T . PASS END=101005018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 101005019 . G . PASS END=101005052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 101005053 . G . PASS END=101005056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 101005057 . T . PASS END=101005057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr1 101005058 . G . PASS END=101005061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 101005062 . A . PASS END=101005062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 101005063 . C . PASS END=101005089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 101005090 . G A, 50.00 PASS DP=12;MQ=248.01;MQRankSum=1.932;ReadPosRankSum=2.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,8,0:0.667,0.000:12:2,3,0:2,5,0:47:85,0,47,286,143,429:255,0,119:3,0:5.0000e+01,8.6460e-05,5.0048e+01,2.8612e+02,1.7781e+02,4.3220e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,1,7:1,3,6,2 chr1 101005091 . T . PASS END=101005091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 101005092 . C . PASS END=101005099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 101005100 . C . PASS END=101005127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 101005128 . G . PASS END=101005140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 101005141 . C . PASS END=101005141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 101005142 . T . PASS END=101005143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 101005144 . C . PASS END=101005152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 101005153 . T . PASS END=101005163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 101005164 . C . PASS END=101005231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr1 101005232 . T . PASS END=101005267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 101005268 . G . LowGQ END=101005313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 101005314 . G . PASS END=101005314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 101005315 . G . PASS END=101005350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr1 101005351 . G A, 0.08 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:1,0,0:5,1,0:17:18,0,50,36,208,244:18,0,212:6,0:8.4666e-02,1.7144e+01,7.0144e+01,5.2912e+01,2.6011e+02,2.6410e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,1,0,1:2,4,1,0 chr1 101005352 . C . PASS END=101005388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 101005389 . C . PASS END=101005424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 101005425 . G . PASS END=101005451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,127:0,15,127:5,0 chr1 101005452 . G . LowGQ END=101005488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,53:0,0,61:3,0 chr1 101005489 . C . PASS END=101005505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr1 101005506 . G . PASS END=101005522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 101005523 . T . PASS END=101005523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 101005524 . G . PASS END=101005527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 101005528 . T . PASS END=101005528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 101005529 . A . PASS END=101005534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 101005535 . G . PASS END=101005535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 101005536 . G . PASS END=101005540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,388:0,33,255:11,0 chr1 101005541 . A . LowGQ END=101005541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,292:0,0,255:9,0 chr1 101005542 . C . PASS END=101005551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 101005552 . C . PASS END=101005552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 101005553 . G . PASS END=101005595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:12,0 chr1 101005596 . G . PASS END=101005596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 101005597 . G . PASS END=101005629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:12,0 chr1 101005630 . G . PASS END=101005631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 101005632 . G . PASS END=101005640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 101005641 . G . PASS END=101005641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 101005642 . C . PASS END=101005647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 101005648 . G . PASS END=101005648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 101005649 . G . PASS END=101005659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 101005660 . G . PASS END=101005664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 101005665 . C . PASS END=101005665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:7,0 chr1 101005666 . C . PASS END=101005667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 101005668 . G . PASS END=101005677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:13:7:0,13,225:0,13,255:5,0 chr1 101185417 . A . PASS END=101185480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,101,1638:0,101,255:40,0 chr1 101186032 . C . PASS END=101186034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 101186035 . A . PASS END=101186038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 101186039 . T . PASS END=101186039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 101186040 . T . PASS END=101186041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:20,0 chr1 101186042 . T . PASS END=101186042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 101186043 . A . PASS END=101186045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,707:0,24,255:21,0 chr1 101186046 . A . PASS END=101186052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:23,0 chr1 101186053 . C . PASS END=101186053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 101186054 . C . PASS END=101186055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,799:0,33,255:23,0 chr1 101186056 . C . PASS END=101186056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 101186057 . C . PASS END=101186058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 101186059 . C . PASS END=101186061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 101186062 . A . PASS END=101186062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,976:0,35,255:27,0 chr1 101186063 . A . PASS END=101186065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 101186066 . T . PASS END=101186066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 101186067 . A . PASS END=101186067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:32,0 chr1 101186068 . G . PASS END=101186068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 101186069 . A . PASS END=101186070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:32,0 chr1 101186071 . A . PASS END=101186071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:33,0 chr1 101186072 . T . PASS END=101186072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1105:0,71,255:33,0 chr1 101186073 . C . PASS END=101186073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr1 101186074 . T . PASS END=101186074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 101186075 . T . PASS END=101186075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr1 101186076 . G . PASS END=101186077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 101186078 . T . PASS END=101186078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:32,0 chr1 101186079 . C . PASS END=101186089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:63:34:0,63,1196:0,63,255:36,0 chr1 101186090 . C . PASS END=101186296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1372:0,81,255:40,0 chr1 101186297 . G . PASS END=101186307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:34:0,63,945:0,84,255:26,0 chr1 101188576 . C . PASS END=101188576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:23,0 chr1 101188577 . T . PASS END=101188590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 101188591 . C . PASS END=101188591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 101188592 . A . PASS END=101188600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 101188601 . T . PASS END=101188601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr1 101188602 . T . PASS END=101188608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,870:0,69,255:24,0 chr1 101188609 . G . PASS END=101188609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 101188610 . C . PASS END=101188618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 101188619 . G . PASS END=101188632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 101188633 . T . PASS END=101188675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,861:0,67,255:26,0 chr1 101188676 . G . PASS END=101188677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 101188678 . T . PASS END=101188690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1000:0,78,255:26,0 chr1 101188691 . A . PASS END=101188691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 101188692 . C . PASS END=101188706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,917:0,68,255:26,0 chr1 101188707 . C . PASS END=101188719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1139:0,84,255:30,0 chr1 101188720 . A . PASS END=101188720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 101188721 . G . PASS END=101188722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1116:0,87,255:31,0 chr1 101188723 . A . PASS END=101188723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 101188724 . A . PASS END=101188888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1141:0,80,255:40,0 chr1 101188889 . A . PASS END=101188889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:28,0 chr1 101188890 . G . PASS END=101188894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 101188895 . C . PASS END=101188896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 101190180 . T . PASS END=101190184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 101190185 . C . PASS END=101190190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:32,0 chr1 101190191 . A . PASS END=101190191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1132:0,60,255:32,0 chr1 101190192 . A . PASS END=101190210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1188:0,96,255:35,0 chr1 101190211 . T . PASS END=101190446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:35:0,92,1275:0,92,255:40,0 chr1 101194663 . A . PASS END=101194671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,515:0,48,255:19,0 chr1 101194672 . T . PASS END=101194672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 101194673 . T . PASS END=101194673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 101194674 . A . PASS END=101194685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,817:0,63,255:24,0 chr1 101194686 . T . PASS END=101194686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 101194687 . C . PASS END=101194867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1156:0,83,255:40,0 chr1 101194868 . A . PASS END=101194868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1140:0,75,255:27,0 chr1 101194869 . C . PASS END=101194874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:29,0 chr1 101194875 . T . PASS END=101194899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,74,255:25,0 chr1 101194900 . A . PASS END=101194900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 101194901 . T . PASS END=101194914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:25,0 chr1 101194915 . A . PASS END=101194915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 101194916 . G . PASS END=101194920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 101194921 . T . PASS END=101194921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 101194922 . C . PASS END=101194922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 101194923 . C . PASS END=101194923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 101194924 . A . PASS END=101194924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 101194925 . G . PASS END=101194926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 101194927 . T . PASS END=101194934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:17,0 chr1 101194935 . T . PASS END=101194938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:19:0,39,585:0,40,255:13,0 chr1 101196754 . C . PASS END=101196754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 101196755 . A . PASS END=101196773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1024:0,81,255:32,0 chr1 101196774 . A . PASS END=101196774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr1 101196775 . T . PASS END=101197074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1119:0,80,255:40,0 chr1 101197974 . T . PASS END=101197980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 101197981 . C . PASS END=101197981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 101197982 . A . PASS END=101197982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 101197983 . G . PASS END=101197988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 101197989 . C . PASS END=101198004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr1 101198005 . C . PASS END=101198042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:19,0 chr1 101198043 . T . PASS END=101198058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:25,0 chr1 101198059 . G . PASS END=101198063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:29,0 chr1 101198064 . T . PASS END=101198064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:28,0 chr1 101198065 . T . PASS END=101198078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 101198079 . T . PASS END=101198079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr1 101198080 . C . PASS END=101198091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:30,0 chr1 101198092 . G . PASS END=101198092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr1 101198093 . C . PASS END=101198240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:30:0,85,1155:0,85,255:40,0 chr1 101200058 . T . PASS END=101200298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:37:0,87,1246:0,87,255:40,0 chr1 101200299 . A . PASS END=101200299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr1 101200300 . A . PASS END=101200318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1127:0,82,255:33,0 chr1 101200319 . T . PASS END=101200324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:73:30:0,73,1015:0,73,255:26,0 chr1 101203679 . G . PASS END=101203789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,100,1255:0,100,255:40,0 chr1 101203790 . A . PASS END=101203826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:33:0,90,1350:0,99,255:40,0 chr1 101203827 . G A, 146.31 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,18,0:0,15,0:96:184,99,0,1259,99,1259:255,99,0:0,0:1.4631e+02,9.6314e+01,0.0000e+00,4.5000e+02,1.3108e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,20:0,0,16,17 chr1 101203828 . T . PASS END=101203839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1224:0,83,255:30,0 chr1 101339498 . T . PASS END=101339986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:85:32:0,85,1296:0,85,255:40,0 chr1 101342350 . C . PASS END=101342420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:53:0,120,1800:0,146,255:40,0 chr1 101343032 . C . PASS END=101343069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,107,1435:0,107,255:40,0 chr1 101343070 . C . PASS END=101343070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:69:51:0,69,1207:0,69,255:40,0 chr1 101343071 . T . PASS END=101343098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,102,1402:0,102,255:40,0 chr1 101343099 . G . PASS END=101343099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:75:55:0,75,1462:0,75,255:40,0 chr1 101343100 . A . PASS END=101343459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:86:33:0,86,1173:0,86,255:40,0 chr1 101343980 . T . PASS END=101344003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,235,255:40,0 chr1 101354309 . C . PASS END=101354313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:100:0,120,1800:0,255,255:40,0 chr1 101361819 . A . PASS END=101361898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:36:0,94,1230:0,94,255:40,0 chr1 101362126 . G . PASS END=101362227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,147,255:40,0 chr1 101372408 . C . PASS END=101372521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:45:0,96,1440:0,122,255:40,0 chr1 101376619 . G . PASS END=101376706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,137,255:40,0 chr1 101377668 . A . PASS END=101377794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:45:0,96,1440:0,107,255:40,0 chr1 101379219 . G . PASS END=101379222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1279:0,99,255:33,0 chr1 101379223 . C . PASS END=101379223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr1 101379224 . G . PASS END=101379350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1133:0,81,255:40,0 chr1 101379351 . T . PASS END=101379351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 101379352 . T . PASS END=101379355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1111:0,93,255:31,0 chr1 101379356 . T . PASS END=101379356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 101379357 . C . PASS END=101379359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 101379360 . A . PASS END=101379360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 101379361 . T . PASS END=101379362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 101383633 . A . PASS END=101383683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,189,255:40,0 chr1 101387262 . G . PASS END=101387397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:93:48:0,93,1395:0,144,255:40,0 chr1 101397631 . T . PASS END=101397658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:83:0,120,1800:0,222,255:40,0 chr1 101427384 . T . PASS END=101427474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,118,1568:0,118,255:40,0 chr1 101431325 . G . PASS END=101431474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:35:0,87,1305:0,89,255:40,0 chr1 101437833 . G . PASS END=101437850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:33,0 chr1 101437851 . T . PASS END=101437851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 101437852 . G . PASS END=101437853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:29,0 chr1 101440366 . G . PASS END=101440413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:51:0,120,1800:0,130,255:40,0 chr1 101455964 . T . PASS END=101456063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:32:0,94,1089:0,94,255:40,0 chr1 101456064 . A . PASS END=101456064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 101456065 . T . PASS END=101456094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1189:0,91,255:36,0 chr1 101456095 . C . PASS END=101456096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr1 101456097 . G . PASS END=101456125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1210:0,86,255:36,0 chr1 101456126 . A . PASS END=101456126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:29,0 chr1 101456127 . A . PASS END=101456142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1105:0,86,255:31,0 chr1 101456143 . C . PASS END=101456143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1047:0,38,255:27,0 chr1 101456144 . T . PASS END=101456144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 101456145 . C . PASS END=101456146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1047:0,60,255:27,0 chr1 101456147 . A . PASS END=101456147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:27,0 chr1 101456148 . A . PASS END=101456159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,1053:0,60,255:27,0 chr1 101456160 . C . PASS END=101456160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 101456161 . C . PASS END=101456161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 101456162 . A . PASS END=101456163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,880:0,50,255:23,0 chr1 101456164 . C . PASS END=101456168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:26:0,63,945:0,64,255:23,0 chr1 101456169 . A . PASS END=101456169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,732:0,44,255:19,0 chr1 101456170 . G . PASS END=101456175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:22,0 chr1 101456176 . C . PASS END=101456176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:21,0 chr1 101456177 . C . PASS END=101456177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 101456178 . T . PASS END=101456182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 101456183 . A . PASS END=101456183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr1 101456184 . A . PASS END=101456186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 101456187 . G . PASS END=101456187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 101458193 . C . PASS END=101458296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,112,1476:0,112,255:40,0 chr1 101460666 . T . PASS END=101460705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:95:0,120,1800:0,255,255:40,0 chr1 101467023 . C . PASS END=101467143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:65:0,120,1800:0,151,255:40,2 chr1 101479266 . C . PASS END=101479374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,105,1308:0,105,255:40,0 chr1 101487197 . C . PASS END=101487321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:46:0,120,1800:0,138,255:40,0 chr1 101490865 . C . PASS END=101490870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:18,0 chr1 101490871 . T . PASS END=101490871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 101490872 . T . PASS END=101490875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 101490876 . T . PASS END=101490894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,823:0,66,255:26,0 chr1 101490895 . G . PASS END=101490951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1149:0,93,255:36,0 chr1 101490952 . T . PASS END=101490952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:32,0 chr1 101490953 . G . PASS END=101490981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr1 101490982 . C . PASS END=101490982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 101490983 . C . PASS END=101490985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 101490986 . A . PASS END=101490999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,70,255:26,0 chr1 101704541 . A . PASS END=101704563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:18,0 chr1 101704564 . G . PASS END=101704565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 101704566 . T . PASS END=101704566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 101704567 . C . PASS END=101704567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 101704568 . A . PASS END=101704569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 101704570 . G . PASS END=101704571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 101704572 . C . PASS END=101704572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 101704573 . C . PASS END=101704576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 101704577 . C . PASS END=101704577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 101704578 . G . PASS END=101704601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 101704602 . A . PASS END=101704602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,746:0,55,255:20,0 chr1 101704603 . C . PASS END=101704608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 101704609 . T . PASS END=101704609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 101704610 . A . PASS END=101704612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,906:0,72,255:24,0 chr1 101704613 . A . PASS END=101704613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:22,0 chr1 101704614 . T . PASS END=101704644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,864:0,72,255:25,0 chr1 101704645 . G . PASS END=101704645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:24,0 chr1 101704646 . A . PASS END=101704665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,955:0,65,255:26,0 chr1 101704666 . G . PASS END=101704669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 101704670 . A . PASS END=101704670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 101704671 . G . PASS END=101704701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:33:0,83,1164:0,83,255:37,0 chr1 101704702 . C . PASS END=101704702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:34,0 chr1 101704703 . A . PASS END=101704775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1181:0,84,255:35,0 chr1 101704776 . C . PASS END=101704776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 101704777 . C . PASS END=101704781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 101704782 . A . PASS END=101704792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr1 101704793 . G . PASS END=101704801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 101704802 . G . PASS END=101704803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 101704804 . C . PASS END=101704804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:24,0 chr1 101704805 . C . PASS END=101704805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 101704806 . T . PASS END=101704807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,92,255:27,0 chr1 101704808 . T . PASS END=101704808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 101704809 . C . PASS END=101704809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 101704810 . A . PASS END=101704842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,62,255:26,0 chr1 101704843 . C . PASS END=101704843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:20,0 chr1 101704844 . C . PASS END=101704862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:23,0 chr1 101704863 . C . PASS END=101704872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 101704873 . G . PASS END=101704873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:18,0 chr1 101704874 . C . PASS END=101704878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 101704879 . T . PASS END=101704879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 101704880 . C . PASS END=101704901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,662:0,41,255:19,0 chr1 101704902 . A . PASS END=101704902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 101704903 . A . PASS END=101704912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,674:0,44,255:19,0 chr1 101704913 . T . PASS END=101704914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,610:0,60,255:21,0 chr1 101704915 . T . PASS END=101704915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 101704916 . G . PASS END=101704921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 101704922 . C . PASS END=101704922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 101704923 . T . PASS END=101704932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,815:0,69,255:26,0 chr1 101704933 . C . PASS END=101704933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 101704934 . G . PASS END=101704965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,68,255:26,0 chr1 101704966 . C . PASS END=101705000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1097:0,83,255:37,0 chr1 101705001 . G . PASS END=101705001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:35,0 chr1 101705002 . G . PASS END=101705046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:37:0,94,1396:0,94,255:40,0 chr1 101705047 . C . PASS END=101705047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1338:0,71,255:40,0 chr1 101705048 . A . PASS END=101705140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:31:0,82,1202:0,82,255:40,0 chr1 101705141 . C . PASS END=101705148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:26,0 chr1 101705149 . C . PASS END=101705149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 101705150 . C . PASS END=101705151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 101705152 . C . PASS END=101705152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:20,0 chr1 101705153 . T . PASS END=101705153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 101705154 . T . PASS END=101705156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,815:0,36,255:21,0 chr1 101705157 . G . PASS END=101705165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 101705166 . T . PASS END=101705168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 101705169 . T . PASS END=101705171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 101705172 . C . PASS END=101705204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,630:0,41,255:18,0 chr1 101705205 . G . PASS END=101705243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 101705244 . T . PASS END=101705244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 101705245 . G . PASS END=101705268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 101705269 . G . PASS END=101705292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 101705293 . G . PASS END=101705293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 101705294 . C . PASS END=101705315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,613:0,45,255:18,0 chr1 101705316 . T . PASS END=101705318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 101705319 . T . PASS END=101705350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:19,0 chr1 101705351 . C . PASS END=101705357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 101705358 . T . PASS END=101705358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 101705359 . C . PASS END=101705372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:22,0 chr1 101705373 . T . PASS END=101705379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 101705380 . G . PASS END=101705394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 101705395 . G . PASS END=101705399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 101705400 . G . PASS END=101705401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 101705402 . G . PASS END=101705412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 101705413 . C . PASS END=101705421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr1 101705422 . G . PASS END=101705422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 101705423 . T . PASS END=101705423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 101705424 . A . PASS END=101705425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,804:0,53,255:23,0 chr1 101705426 . T . PASS END=101705454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:26,0 chr1 101705455 . C . PASS END=101705459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:27,0 chr1 101705460 . A . PASS END=101705460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,862:0,64,255:26,0 chr1 101705461 . C . PASS END=101705464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 101705465 . A . PASS END=101705466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 101705467 . C . PASS END=101705516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1173:0,87,255:36,0 chr1 101705517 . T . PASS END=101705517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr1 101705518 . G . PASS END=101705626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:35:0,81,1230:0,81,255:38,0 chr1 101705627 . A . PASS END=101705627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:32,0 chr1 101705628 . A . PASS END=101705641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1203:0,88,255:34,0 chr1 101705642 . A . PASS END=101705649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:30:0,69,1035:0,90,255:24,0 chr1 101705650 . G . PASS END=101705689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,554:0,40,255:19,0 chr1 102269794 . C . PASS END=102269885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:29:0,87,1056:0,87,255:40,0 chr1 102269886 . T . PASS END=102269922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,120,1800:0,148,255:40,0 chr1 102269923 . G A, 48.89 PASS DP=56;MQ=250.00;MQRankSum=6.349;ReadPosRankSum=4.429;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,24,0:0.429,0.000:56:18,7,0:14,17,0:46:84,0,47,184,184,184:255,0,255:30,0:4.8891e+01,9.9403e-05,5.0000e+01,1.8366e+02,2.1843e+02,1.8667e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,15,14,10:21,11,13,11 chr1 102269924 . T . PASS END=102269960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,135,255:40,0 chr1 102269961 . T . PASS END=102270471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,101,1491:0,101,255:40,0 chr1 102271632 . T . PASS END=102271738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,120,1800:0,147,255:40,0 chr1 102278647 . T . PASS END=102278702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,1:115:99:106:0,120,1800:0,255,255:40,0 chr1 102290582 . T . PASS END=102290598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:26,0 chr1 102290599 . T . PASS END=102290602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 102290603 . G A, 35.54 PASS DP=30;MQ=250.00;MQRankSum=4.104;ReadPosRankSum=1.759;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,8,0:0.267,0.000:30:12,6,0:10,2,0:35:70,0,50,286,750,1036:229,0,255:20,0:3.5536e+01,1.2357e-03,5.3001e+01,2.8615e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,3,5:13,9,3,5 chr1 102290604 . A . PASS END=102290605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,989:0,87,255:29,0 chr1 102290606 . G . PASS END=102290606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 102290607 . T . PASS END=102290640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:31:0,90,1350:0,93,255:40,0 chr1 102290641 . T . PASS END=102290801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:85:39:0,85,1467:0,85,255:40,0 chr1 102296225 . T . PASS END=102296225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 102296228 . C . PASS END=102296241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,131,255:40,0 chr1 102296242 . T . PASS END=102296278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,128,255:40,0 chr1 102296279 . T C, 49.80 PASS DP=63;MQ=250.00;MQRankSum=6.805;ReadPosRankSum=3.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,30,0:0.476,0.000:63:13,17,0:20,13,0:48:85,0,50,1065,1172,2237:255,0,255:31,0:4.9804e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,19,17,13:20,13,16,14 chr1 102296280 . T . PASS END=102296316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,136,255:40,0 chr1 102296317 . A . PASS END=102296383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:40:0,87,1305:0,96,255:40,0 chr1 102302435 . C . PASS END=102302469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1213:0,95,255:37,0 chr1 102302470 . C . PASS END=102302470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 102302471 . A . PASS END=102302559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,94,255:40,0 chr1 102302560 . C . PASS END=102302565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:26,0 chr1 102302566 . T . PASS END=102302570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,74,255:19,0 chr1 102302571 . C . PASS END=102302571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 102302572 . T . PASS END=102302573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 102302574 . A . PASS END=102302576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 102302577 . T . PASS END=102302581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 102312401 . T . PASS END=102312401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 102312402 . A . PASS END=102312529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:30:0,82,1028:0,82,255:40,0 chr1 102462304 . C . PASS END=102462372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:75:0,120,1800:0,185,255:40,1 chr1 103342040 . T . PASS END=103342040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr1 103342087 . C . PASS END=103342087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 103342274 . A . PASS END=103342274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr1 103342336 . A . PASS END=103342336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 103342345 . C . PASS END=103342345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,240,255:40,0 chr1 103342348 . A . PASS END=103342348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,191,255:40,0 chr1 103342372 . C . PASS END=103342372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 103342493 . C . PASS END=103342493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 103342622 . C . PASS END=103342622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 103342674 . A . PASS END=103342674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 103342699 . C . PASS END=103342699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 103342766 . G . PASS END=103342766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 103342860 . T . PASS END=103342860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 103342946 . C . PASS END=103342946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 103342996 . T . PASS END=103342996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 103343040 . T . PASS END=103343040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 103343067 . C . PASS END=103343067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 103343089 . A . PASS END=103343089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 103343149 . T . PASS END=103343149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1349:0,105,255:35,0 chr1 103343335 . T . PASS END=103343335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1420:0,120,255:40,0 chr1 103343391 . T . PASS END=103343391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 103343535 . G . PASS END=103343535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 103343558 . T . PASS END=103343558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr1 103343575 . T . PASS END=103343719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:84:48:0,84,1260:0,132,255:40,1 chr1 103343720 . G . PASS END=103343721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:75:44:0,75,1125:0,132,255:25,0 chr1 103343730 . T . PASS END=103343730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 103343736 . A . PASS END=103343736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 103345239 . C . PASS END=103345247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:36,0 chr1 103345248 . A . PASS END=103345248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1356:0,76,255:37,0 chr1 103345249 . T . PASS END=103345444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1215:0,93,255:40,0 chr1 103345445 . A . PASS END=103345445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr1 103345446 . A . PASS END=103345446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 103345447 . T . PASS END=103345468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:25:0,62,929:0,62,255:26,0 chr1 103345469 . A . PASS END=103345469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 103345470 . A . PASS END=103345471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 103345472 . G . PASS END=103345472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 103347253 . C . PASS END=103347321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,157,255:40,0 chr1 103348755 . T . PASS END=103348867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:46:0,105,1604:0,105,255:40,0 chr1 103348870 . A . PASS END=103348870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr1 103352363 . C . PASS END=103352612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:38:0,87,1305:0,98,255:40,0 chr1 103354133 . T . PASS END=103354137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:19,0 chr1 103354138 . A G, 49.57 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=0.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,9,0:0.450,0.000:20:7,5,0:4,4,0:48:84,0,50,322,367,689:255,0,255:10,0:4.9567e+01,6.9634e-05,5.3000e+01,3.2191e+02,4.0162e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,8,1:7,4,6,3 chr1 103354139 . C . PASS END=103354139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 103354140 . C . PASS END=103354154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,839:0,63,255:24,0 chr1 103354155 . A . PASS END=103354155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 103354156 . G . PASS END=103354175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 103354176 . C . PASS END=103354178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 103354179 . G . PASS END=103354180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 103354181 . G . PASS END=103354186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 103354190 . T . PASS END=103354190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 103354278 . C . PASS END=103354314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:44:0,97,1615:0,97,255:40,0 chr1 103354422 . T . PASS END=103354427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:37,0 chr1 103354428 . A G, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=2.209;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,22,0:0.537,0.000:41:7,11,0:12,11,0:48:85,0,50,787,680,1466:255,0,255:17,0:5.0000e+01,6.7563e-05,5.2549e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,15,12,10:14,5,13,9 chr1 103354429 . C . PASS END=103354463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1304:0,88,255:36,0 chr1 103354464 . A . PASS END=103354464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:25,0 chr1 103354465 . C . PASS END=103354465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 103354466 . C . PASS END=103354467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:29,0 chr1 103354468 . G . PASS END=103354468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr1 103354469 . G . PASS END=103354470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 103354471 . A . PASS END=103354475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 103355011 . C . PASS END=103355115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:35:0,87,1305:0,89,255:40,1 chr1 103355116 . T . PASS END=103355118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 103355133 . G . PASS END=103355133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 103356007 . C . PASS END=103356007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1316:0,81,255:37,2 chr1 103356008 . T . PASS END=103356008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1421:0,60,255:39,2 chr1 103356009 . T . PASS END=103356022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:42:0,88,1527:0,88,255:40,0 chr1 103356023 . C . PASS END=103356047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:49:0,81,1215:0,120,255:40,0 chr1 103356048 . A . PASS END=103356060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:66:46:0,66,990:0,122,255:26,0 chr1 103356072 . CA C,CAA,CAAA, 50.00 PASS DP=46;MQ=248.86;MQRankSum=5.144;ReadPosRankSum=-0.656;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:18,1,23,2,0:0.023,0.523,0.045,0.000:44:8,1,11,0,0:10,0,12,2,0:47:65,333,236,0,171,48,191,478,171,236,201,401,130,334,301:255,0,255:18,41:5.0000e+01,3.3321e+02,2.3940e+02,7.9730e-05,1.8640e+02,5.0776e+01,1.9134e+02,4.5000e+02,1.8551e+02,2.3851e+02,2.2078e+02,4.3552e+02,1.6434e+02,3.6866e+02,3.2360e+02:0.00,15.00,18.00,15.00,30.00,18.00,15.00,30.00,30.00,18.00,34.77,49.77,49.77,49.77,37.77:5,13,11,15:7,11,13,13 chr1 103360928 . C . PASS END=103361020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:76:0,120,1800:0,223,255:40,0 chr1 103363679 . A . PASS END=103363679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1241:0,96,255:32,0 chr1 103363681 . C . PASS END=103363686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1446:0,120,255:40,0 chr1 103363687 . A . PASS END=103363687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:40,0 chr1 103363688 . C . PASS END=103363734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:39:0,96,1440:0,110,255:40,0 chr1 103364221 . C . PASS END=103364225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr1 103364226 . G . PASS END=103364236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1227:0,89,255:36,0 chr1 103364237 . G . PASS END=103364237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1158:0,53,255:34,0 chr1 103364238 . C . PASS END=103364329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1267:0,84,255:39,0 chr1 103364494 . T . PASS END=103364494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr1 103364497 . C . PASS END=103364550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:69:0,120,1800:0,184,255:40,1 chr1 103364554 . T . PASS END=103364554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 103377715 . T . PASS END=103377768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,162,255:40,0 chr1 103379192 . C . PASS END=103379246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,175,255:40,0 chr1 103379906 . A . PASS END=103379907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,120,1468:0,120,255:40,0 chr1 103379908 . T . PASS END=103379961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,99,1462:0,112,255:40,0 chr1 103380260 . C . PASS END=103380266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 103380267 . C . PASS END=103380272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,986:0,78,255:26,0 chr1 103380273 . G . PASS END=103380281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:28,0 chr1 103380282 . T . PASS END=103380282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 103380283 . C . PASS END=103380285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:30,0 chr1 103380286 . C . PASS END=103380286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 103380287 . T . PASS END=103380311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1180:0,83,255:32,0 chr1 103380312 . C . PASS END=103380312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr1 103380313 . C . PASS END=103380334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:32,0 chr1 103380335 . T . PASS END=103380336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 103380337 . C . PASS END=103380362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,74,255:26,0 chr1 103380363 . G . PASS END=103380367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:27:0,48,720:0,81,255:19,0 chr1 103380377 . G . PASS END=103380377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:21:23:0,21,315:0,34,255:7,2 chr1 103380379 . TA T,TAAA,TAAAA,TAAAAA,AA, 0.21 DRAGENIndelHardQUAL DP=23;MQ=250.00;FractionInformativeReads=0.826 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:11,3,4,1,0,0,0:0.158,0.211,0.053,0.000,0.000,0.000:19:4,2,1,0,0,0,0:7,1,3,1,0,0,0:13:0,22,72,3,65,53,20,91,224,70,37,116,240,339,87,66,178,222,314,393,116,12,68,90,111,124,143,76:143,0,255:7,11:2.1168e-01,3.2504e+01,8.5504e+01,1.3362e+01,8.4853e+01,6.6362e+01,3.0659e+01,1.1145e+02,2.4415e+02,8.3659e+01,4.7218e+01,1.3582e+02,2.5980e+02,3.5937e+02,1.0022e+02,1.0051e+02,2.2281e+02,2.6707e+02,3.5874e+02,4.3812e+02,1.5351e+02,4.6506e+01,1.1290e+02,1.3490e+02,1.5596e+02,1.6898e+02,2.1289e+02,1.1417e+02:0.00,10.00,13.00,10.00,20.00,13.00,10.00,20.00,20.00,13.00,10.00,20.00,20.00,20.00,13.00,34.77,44.77,44.77,44.77,44.77,37.77,34.77,44.77,44.77,44.77,44.77,69.54,37.77:5,6,4,4:8,3,5,3 chr1 103381182 . C . PASS END=103381182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 103381186 . C . PASS END=103381240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,111,1598:0,119,255:40,0 chr1 103385867 . C . PASS END=103385921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,120,1800:0,143,255:40,0 chr1 103387074 . A . PASS END=103387076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 103387077 . A . PASS END=103387077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:26,0 chr1 103387078 . G . PASS END=103387078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 103387079 . C . PASS END=103387080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 103387081 . C . PASS END=103387087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 103387088 . G . PASS END=103387088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 103387089 . A . PASS END=103387091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 103387092 . T . PASS END=103387092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,946:0,45,255:25,0 chr1 103387093 . T . PASS END=103387109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,909:0,67,255:26,0 chr1 103387110 . T . PASS END=103387110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 103387111 . G . PASS END=103387112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 103387113 . A . PASS END=103387114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:25:0,45,855:0,45,255:19,0 chr1 103387115 . G . PASS END=103387115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 103387116 . A . PASS END=103387116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:19,0 chr1 103387117 . C . PASS END=103387117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 103387118 . C . PASS END=103387118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 103387119 . A . PASS END=103387122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 103387123 . G . PASS END=103387123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 103387124 . G . PASS END=103387125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 103387126 . C . PASS END=103387127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 103388892 . C . PASS END=103388945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,102,1530:0,137,255:40,0 chr1 103400005 . C . PASS END=103400112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1189:0,86,255:40,0 chr1 103400616 . A . PASS END=103400669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,89,255:40,0 chr1 103404587 . T . PASS END=103404587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,182,255:40,0 chr1 103404591 . A . PASS END=103404644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,181,255:40,0 chr1 103405883 . C . PASS END=103405886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:28,0 chr1 103405887 . T . PASS END=103405889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 103405890 . C . PASS END=103405890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 103405891 . C . PASS END=103405891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 103405892 . G A, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,15,0:0,13,0:81:169,84,0,1086,84,1086:255,87,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,12:0,0,15,13 chr1 103405893 . T . PASS END=103405893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 103405894 . C . PASS END=103405897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr1 103405898 . C . PASS END=103405898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:27,0 chr1 103405899 . C . PASS END=103405900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 103405901 . A . PASS END=103405901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 103405902 . G . PASS END=103405902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 103405903 . G . PASS END=103405903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 103405904 . G . PASS END=103405905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 103405906 . A . PASS END=103405906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 103405907 . G . PASS END=103405927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:36,0 chr1 103405928 . T . PASS END=103405928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr1 103405929 . G . PASS END=103405929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 103405930 . G . PASS END=103405980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1169:0,83,255:40,0 chr1 103405981 . C . PASS END=103405981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:26,0 chr1 103405982 . T . PASS END=103405986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 103405987 . C . PASS END=103405987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:26,0 chr1 103405988 . T . PASS END=103405988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 103405989 . C . PASS END=103405990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1039:0,71,255:25,0 chr1 103406003 . T . PASS END=103406003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 103412405 . A . PASS END=103412416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,631:0,57,255:19,0 chr1 103412417 . C . PASS END=103412430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:22,0 chr1 103412431 . C . PASS END=103412431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 103412432 . A . PASS END=103412504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,840:0,61,255:26,0 chr1 103412505 . G . PASS END=103412512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:19,0 chr1 103427409 . T . PASS END=103427409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1457:0,114,255:38,0 chr1 103427421 . C . PASS END=103427444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,131,255:40,0 chr1 103427445 . G . PASS END=103427475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,123,255:40,0 chr1 103427732 . C . PASS END=103427806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,138,255:40,0 chr1 103427807 . A . PASS END=103427821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,158,255:40,0 chr1 103428209 . C . PASS END=103428291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1215:0,95,255:40,0 chr1 103428292 . T . PASS END=103428292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 103428293 . T . PASS END=103428297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 103428298 . C . PASS END=103428300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,82,255:25,0 chr1 103428301 . T . PASS END=103428301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 103428302 . C . PASS END=103428316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:25,0 chr1 103431040 . T . PASS END=103431040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:33,0 chr1 103431043 . C . PASS END=103431096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,101,1303:0,101,255:38,0 chr1 103435775 . A . PASS END=103435828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:49:0,120,1800:0,147,255:40,0 chr1 103435830 . T . PASS END=103435830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 103440385 . C . PASS END=103440439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,108,1620:0,114,255:40,0 chr1 103444259 . C . PASS END=103444259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 103444260 . G . PASS END=103444260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr1 103444264 . T . PASS END=103444284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1194:0,93,255:36,0 chr1 103444285 . A . PASS END=103444285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr1 103444286 . G . PASS END=103444295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1351:0,97,255:35,0 chr1 103444296 . C . PASS END=103444296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:31,0 chr1 103444297 . A . PASS END=103444308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:38:0,96,1440:0,96,255:37,0 chr1 103444416 . C . PASS END=103444459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,112,1800:0,112,255:40,0 chr1 103444460 . C . PASS END=103444469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,147,255:40,0 chr1 103444613 . T . PASS END=103444613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 103444616 . C . PASS END=103444641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:54:0,113,1800:0,113,255:40,0 chr1 103444642 . C . PASS END=103444660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,157,255:40,0 chr1 103444929 . A . PASS END=103444929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 103444938 . C . PASS END=103444991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:76:0,120,1800:0,212,255:40,0 chr1 103445153 . A . PASS END=103445168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,194,255:40,0 chr1 103449602 . A . PASS END=103449602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 103449694 . C . PASS END=103449747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:86:0,120,1800:0,231,255:40,0 chr1 103453189 . C . PASS END=103453204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 103453205 . C . PASS END=103453223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr1 103453224 . C . PASS END=103453237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 103453238 . C . PASS END=103453239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 103453240 . A . PASS END=103453296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,537:0,48,255:16,0 chr1 103455066 . A . PASS END=103455066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 103455074 . T . PASS END=103455127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,255,255:40,0 chr1 103461420 . C . PASS END=103461464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:57:0,114,1800:0,114,255:40,0 chr1 103461545 . C . PASS END=103461545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr1 103461546 . T . PASS END=103461570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:36:0,87,1305:0,92,255:38,0 chr1 103461571 . C . PASS END=103461571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:27,0 chr1 103461572 . A . PASS END=103461583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:29,0 chr1 103461584 . T . PASS END=103461598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:24,0 chr1 103462630 . A . PASS END=103462630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,253,255:40,0 chr1 103462636 . C . PASS END=103462680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:85:0,120,1800:0,224,255:40,0 chr1 103463866 . A . PASS END=103463914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,86,255:40,0 chr1 103463915 . G . PASS END=103463919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,96,255:23,0 chr1 103463934 . A . PASS END=103463934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 103466710 . T . PASS END=103466757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,224,255:40,0 chr1 103467059 . C . PASS END=103467187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:74:0,120,1800:0,206,255:40,0 chr1 103467412 . T . PASS END=103467525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:63:0,120,1800:0,173,255:40,0 chr1 103467529 . T . PASS END=103467529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 103467981 . T . PASS END=103467981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 103467984 . C . PASS END=103468037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,137,255:40,0 chr1 103468303 . C . PASS END=103468347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:60:0,120,1800:0,180,255:40,0 chr1 103468357 . A . PASS END=103468357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 103468771 . A . PASS END=103468812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,132,255:40,0 chr1 103468813 . A . PASS END=103468824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,122,255:40,0 chr1 103470000 . A . PASS END=103470044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,130,255:40,0 chr1 103470161 . T . PASS END=103470161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,157,255:40,0 chr1 103470164 . C . PASS END=103470217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:45:0,96,1440:0,118,255:40,0 chr1 103471383 . A . PASS END=103471383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 103471394 . C . PASS END=103471406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:71:0,120,1800:0,200,255:40,0 chr1 103471407 . T . PASS END=103471444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:90:78:0,90,1350:0,221,255:40,0 chr1 103471445 . T . PASS END=103471447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:75:82:0,75,1125:0,246,255:26,0 chr1 103471456 . CCAT C,CCATCAT, 320.29 PASS DP=82;MQ=248.82;MQRankSum=3.571;ReadPosRankSum=-0.059;FractionInformativeReads=0.768;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:6,31,26,0:0.492,0.413,0.000:63:4,13,13,0:2,18,13,0:47:336,518,55,278,0,55,618,618,618,618:255,0,255:6,80:3.2029e+02,4.5000e+02,5.0000e+01,2.6963e+02,8.8013e-05,4.9888e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,8.00,11.01,8.00,16.00,11.01,34.77,42.77,42.77,37.78:2,4,25,32:2,4,32,25 chr1 103471624 . C . PASS END=103471677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,185,255:40,0 chr1 103471818 . C . PASS END=103471871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:57:0,120,1800:0,161,255:40,0 chr1 103474019 . C . PASS END=103474073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,173,255:40,0 chr1 103474085 . A . PASS END=103474085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 103477968 . C . PASS END=103478025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,160,255:40,0 chr1 103478838 . C . PASS END=103478883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:85:0,120,1800:0,243,255:40,0 chr1 103480067 . C . PASS END=103480150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,149,255:40,0 chr1 103480155 . G . PASS END=103480155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 103481224 . C . PASS END=103481298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,100,1165:0,100,255:40,0 chr1 103481307 . A . PASS END=103481307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 103483376 . C . PASS END=103483438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:40:0,90,1350:0,118,255:40,0 chr1 103483441 . A . PASS END=103483441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 103484363 . C . PASS END=103484363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 103484374 . T . PASS END=103484415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,137,255:40,0 chr1 103487263 . A . PASS END=103487325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:53:0,120,1800:0,132,255:40,0 chr1 103488298 . G . PASS END=103488511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:35:0,81,1215:0,100,255:40,0 chr1 103488512 . G . PASS END=103488527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:24:0,63,1033:0,63,255:26,0 chr1 103488528 . T . PASS END=103488528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 103488529 . A . PASS END=103488531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 103488532 . T . PASS END=103488532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:21,0 chr1 103488533 . A . PASS END=103488541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:23,0 chr1 103488542 . A . PASS END=103488546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 103488547 . A . PASS END=103488552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 103491077 . C . PASS END=103491169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:77:0,120,1800:0,215,255:40,0 chr1 103491184 . A . PASS END=103491184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,229,255:40,0 chr1 103491356 . C . PASS END=103491508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:70:0,120,1800:0,178,255:40,0 chr1 103491772 . C . PASS END=103491888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:74:0,120,1800:0,206,255:40,0 chr1 103491905 . A . PASS END=103491905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:104:0,120,1800:0,255,255:40,0 chr1 103491958 . A . PASS END=103491958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr1 103496630 . T . PASS END=103496657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,140,255:40,0 chr1 103496658 . C . PASS END=103496760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:59:0,120,1800:0,161,255:40,0 chr1 103496761 . C . PASS END=103496776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:55:0,81,1215:0,144,255:40,0 chr1 103496777 . G . PASS END=103496783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:63:52:0,63,945:0,156,255:26,0 chr1 103496784 . A . PASS END=103496787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:54:51:0,54,810:0,106,255:19,0 chr1 103496788 . G . PASS END=103496793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:30:51:0,30,450:0,118,255:13,0 chr1 103496794 . T . PASS END=103496795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:21:50:0,21,315:0,111,255:7,0 chr1 103496796 . T . PASS END=103496802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:15:43:0,15,225:0,57,255:5,2 chr1 103496805 . GAA GA,G, 96.47 PASS DP=42;MQ=250.00;MQRankSum=3.855;ReadPosRankSum=0.314;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:6,31,4,0:0.756,0.098,0.000:41:2,15,2,0:4,16,2,0:46:109,49,0,231,68,128,234,73,273,258:255,0,228:6,54:9.6472e+01,4.6472e+01,9.8109e-05,2.2768e+02,7.4893e+01,1.2789e+02,2.5599e+02,1.0524e+02,3.0440e+02,2.8297e+02:0.00,10.00,13.00,10.00,20.00,13.00,34.77,44.77,44.77,37.77:2,4,13,22:4,2,21,14 chr1 103496813 . A . PASS END=103496813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 103540174 . C . PASS END=103540336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:42:0,105,1575:0,121,255:40,0 chr1 103540340 . A . PASS END=103540340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:41:0,85,1488:0,85,255:36,0 chr1 103540343 . A . PASS END=103540343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 103544214 . T . PASS END=103544427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:49:0,120,1800:0,124,255:40,0 chr1 103548361 . C . PASS END=103548459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,108,1664:0,108,255:40,0 chr1 103548460 . C . PASS END=103548496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:58:0,120,1800:0,143,255:40,0 chr1 103548497 . A C, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.411;ReadPosRankSum=2.968;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,29,0:0.518,0.000:56:14,17,0:13,12,0:48:85,0,50,984,965,1949:255,0,255:23,0:5.0000e+01,6.5751e-05,5.2911e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,16,13,16:14,13,17,12 chr1 103548498 . T . PASS END=103548528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:36:0,90,1350:0,96,255:40,0 chr1 103548540 . G . PASS END=103548540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 103573629 . C . PASS END=103573630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 103573631 . C . PASS END=103573639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 103573640 . T . PASS END=103573640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 103573641 . C . PASS END=103573641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 103573642 . T . PASS END=103573642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 103573643 . C . PASS END=103573697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1036:0,89,255:33,0 chr1 103573698 . A . PASS END=103573698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:26,0 chr1 103573699 . C . PASS END=103573699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 103573700 . C . PASS END=103573700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 103573701 . G . PASS END=103573706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 103573707 . T . PASS END=103573707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:26,0 chr1 103573708 . T . PASS END=103573710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 103573711 . C . PASS END=103573724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1016:0,71,255:26,0 chr1 103573725 . A . PASS END=103573725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:22,0 chr1 103573726 . C . PASS END=103573732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,892:0,69,255:23,0 chr1 103573733 . A . PASS END=103573733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 103573734 . T . PASS END=103573734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 103573784 . T . PASS END=103573784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 103573809 . G . PASS END=103573809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 103573849 . G . PASS END=103573849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 103573928 . C . PASS END=103573928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 103573954 . A . PASS END=103573954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 103573956 . C . PASS END=103573956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 103573964 . C . PASS END=103573964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,131:3,0 chr1 103573982 . C . PASS END=103573982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 103573992 . G . PASS END=103573992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 103960797 . T . LowDepth;LowGQ END=103960846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 103961379 . T . LowDepth;LowGQ END=103961437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 103971909 . C . LowDepth;LowGQ END=103971995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 103975513 . C . LowDepth;LowGQ END=103975684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104068693 . A . PASS END=104068721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:24,0 chr1 104068722 . A . PASS END=104068848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,934:0,81,255:38,0 chr1 104068849 . C . PASS END=104068864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,853:0,69,255:24,0 chr1 104068865 . T . PASS END=104068865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 104068866 . G . PASS END=104068873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 104068874 . A . PASS END=104068884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:19,0 chr1 104070317 . A . PASS END=104070364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:75:0,120,1800:0,195,255:40,0 chr1 104076361 . G . PASS END=104076418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,111,1574:0,113,255:40,0 chr1 104076419 . C . PASS END=104076461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,114,1710:0,134,255:40,0 chr1 104076462 . C T, 50.00 PASS DP=53;MQ=228.46;MQRankSum=0.226;ReadPosRankSum=0.352;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,31,0:0.585,0.000:53:13,17,0:9,14,0:46:85,0,45,185,185,185:255,0,255:16,0:5.0000e+01,1.0924e-04,4.8200e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,11,10,21:12,10,20,11 chr1 104076463 . T . PASS END=104076465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,111,1665:0,120,255:38,0 chr1 104076466 . G . LowGQ END=104076468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,13:51:0:50:0,0,851:87,0,255:40,20 chr1 104076469 . A . PASS END=104076479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,115,1800:0,115,255:40,0 chr1 104077396 . G . PASS END=104077479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:75:0,120,1800:0,197,255:40,0 chr1 104077952 . G . PASS END=104078063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:49:0,102,1530:0,131,255:40,0 chr1 104078748 . G . PASS END=104078816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,180,255:40,0 chr1 104079964 . T . PASS END=104079967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,976:0,81,255:27,0 chr1 104079968 . A . PASS END=104079969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:26,0 chr1 104079970 . G . PASS END=104079970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 104079971 . A . PASS END=104079971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 104079972 . C . PASS END=104080103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:35:0,84,1260:0,91,255:40,0 chr1 104080104 . G . PASS END=104080106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:23,0 chr1 104083972 . A . PASS END=104084097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:59:0,120,1800:0,164,255:40,0 chr1 104085918 . C . PASS END=104085919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 104085920 . G . PASS END=104085929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:31:0,85,1180:0,85,255:34,0 chr1 104085930 . A . PASS END=104085930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:33,0 chr1 104085931 . G . PASS END=104086069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,104,1438:0,104,255:40,0 chr1 104087563 . A . PASS END=104087724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:47:0,120,1800:0,141,255:40,2 chr1 104088870 . A . PASS END=104088964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:52:0,120,1800:0,156,255:40,0 chr1 104089599 . G . PASS END=104089657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:83:0,120,1800:0,250,255:40,0 chr1 104093563 . G . PASS END=104093695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:35:0,105,1218:0,105,255:40,0 chr1 104094343 . C . PASS END=104094402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,177,255:40,0 chr1 104114225 . A . PASS END=104114230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:27,0 chr1 104114231 . T . PASS END=104114231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1050:0,65,255:26,0 chr1 104114232 . T . PASS END=104114233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 104114234 . T . PASS END=104114234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:28,0 chr1 104114235 . T . PASS END=104114392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:82:32:0,82,1141:0,82,255:40,0 chr1 104114732 . G . PASS END=104114878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:50:0,105,1575:0,143,255:40,0 chr1 104115685 . G . PASS END=104115882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:52:0,120,1800:0,155,255:40,0 chr1 104116330 . G . PASS END=104116527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:47:0,120,1800:0,125,255:40,0 chr1 104116528 . C . PASS END=104116560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,135,255:40,0 chr1 104116882 . G . PASS END=104117015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:66:0,120,1800:0,191,255:40,0 chr1 104117845 . G . PASS END=104117967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,120,1800:0,146,255:40,0 chr1 104118063 . G . PASS END=104118162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:68:0,120,1800:0,168,255:40,0 chr1 104120112 . G . PASS END=104120230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:53:0,120,1800:0,133,255:40,0 chr1 104120342 . G . PASS END=104120467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:74:0,120,1800:0,204,255:40,0 chr1 104121933 . G . PASS END=104122122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:51:0,120,1800:0,126,255:40,0 chr1 104160063 . A . PASS END=104160074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 104160075 . C . PASS END=104160078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 104160079 . T . PASS END=104160087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 104160088 . C . PASS END=104160094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:16,0 chr1 104160095 . G . PASS END=104160095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 104160096 . T . PASS END=104160101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 104160102 . T . PASS END=104160102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 104160103 . G . PASS END=104160104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 104160105 . G . PASS END=104160106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 104160107 . T . PASS END=104160107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 104160108 . C . PASS END=104160110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:24,0 chr1 104160111 . T . PASS END=104160111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 104160112 . A . PASS END=104160125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 104160126 . C . PASS END=104160143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1119:0,90,255:31,0 chr1 104160144 . A . PASS END=104160144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 104160145 . T . PASS END=104160214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1038:0,82,255:33,0 chr1 104160215 . A . PASS END=104160216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:32:0,60,1086:0,60,255:29,0 chr1 104160217 . T . PASS END=104160221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 104160222 . G . PASS END=104160224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 104160225 . G . PASS END=104160227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 104160228 . C . PASS END=104160230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,80,255:24,0 chr1 104160576 . G . PASS END=104160584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1109:0,82,255:29,0 chr1 104160585 . C . PASS END=104160585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 104160586 . C . PASS END=104160594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1058:0,90,255:31,0 chr1 104160595 . A . PASS END=104160595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 104160596 . T . PASS END=104160626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:35,0 chr1 104160627 . T . PASS END=104160627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:33,0 chr1 104160628 . G . PASS END=104160635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1294:0,89,255:33,0 chr1 104160636 . T . PASS END=104160636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:33,0 chr1 104160637 . A . PASS END=104160697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1142:0,85,255:40,0 chr1 104160698 . G . PASS END=104160714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:24,0 chr1 104160715 . A . PASS END=104160715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 104160716 . T . PASS END=104160722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 104161533 . G . PASS END=104161561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 104161562 . T . PASS END=104161601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:12,0 chr1 104161602 . A . PASS END=104161602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 104161603 . C . PASS END=104161634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 104161635 . G . PASS END=104161671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 104161672 . A . PASS END=104161679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 104161680 . A . PASS END=104161680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 104161681 . A . PASS END=104161687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 104161688 . A . PASS END=104161707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 104161708 . A . PASS END=104161730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,188:6,0 chr1 104162176 . G . PASS END=104162177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 104162178 . C . PASS END=104162178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 104162179 . A . PASS END=104162406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:87:30:0,87,1166:0,90,255:40,0 chr1 104163173 . G . PASS END=104163262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:38:0,96,1485:0,96,255:40,0 chr1 104163263 . A . PASS END=104163265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:37:0,75,1125:0,94,255:25,0 chr1 104163266 . G . PASS END=104163268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,95,255:27,0 chr1 104163269 . A . PASS END=104163275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:31:0,69,1035:0,93,255:26,0 chr1 104163276 . A . PASS END=104163276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:23,0 chr1 104163277 . G . PASS END=104163283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,74,255:23,0 chr1 104163284 . G . PASS END=104163292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:24:0,45,675:0,72,255:19,0 chr1 104163293 . A . PASS END=104163293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:13,0 chr1 104163294 . T . PASS END=104163306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,42,255:13,0 chr1 104164199 . G . LowDepth;LowGQ END=104164321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104164416 . G . LowDepth;LowGQ END=104164515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104166488 . G . PASS END=104166495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:93:0,120,1800:0,255,255:40,0 chr1 104166496 . T C, 29.22 PASS DP=99;MQ=20.20;MQRankSum=2.912;ReadPosRankSum=4.236;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:55,44,0:0.444,0.000:99:28,20,0:27,24,0:27:64,0,29,1487,1901,3388:255,0,255:40,0:2.9218e+01,7.9418e-03,3.2008e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,25,30,14:29,26,24,20 chr1 104166497 . G . PASS END=104166533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:98:0,120,1800:0,255,255:40,0 chr1 104166534 . A . PASS END=104166606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,0:131:99:116:0,120,1800:0,255,255:40,0 chr1 104166718 . G . PASS END=104166722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1395:0,101,255:33,0 chr1 104166723 . T . PASS END=104166723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:30,0 chr1 104166724 . G . PASS END=104166736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:31,0 chr1 104166737 . A . PASS END=104166750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:24:0,66,990:0,72,255:24,0 chr1 104166751 . C . PASS END=104166751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 104166752 . C . PASS END=104166757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 104166758 . T . PASS END=104166759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,683:0,49,255:21,0 chr1 104166760 . T . PASS END=104166770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,760:0,66,255:22,0 chr1 104166771 . A . PASS END=104166801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,556:0,51,255:18,0 chr1 104166802 . G . PASS END=104166813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 104166814 . A . PASS END=104166819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:12:0,22,404:0,22,255:9,0 chr1 104166820 . C . PASS END=104166843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 104168179 . G . LowDepth;LowGQ END=104168368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104198953 . A . LowDepth;LowGQ END=104199120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104199466 . G . LowDepth;LowGQ END=104199612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104200416 . G . LowDepth;LowGQ END=104200613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104201062 . G . LowDepth;LowGQ END=104201292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104202032 . G . LowDepth;LowGQ END=104202165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104202982 . G . PASS END=104202982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 104202983 . A . PASS END=104202992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 104202993 . A . PASS END=104202993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,820:0,67,255:27,0 chr1 104202994 . A . PASS END=104203104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:31:0,90,1172:0,93,255:40,0 chr1 104203199 . G . PASS END=104203210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 104203211 . G . PASS END=104203211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 104203212 . G . PASS END=104203215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:28,0 chr1 104203216 . T . PASS END=104203225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,68,255:23,0 chr1 104203226 . G . PASS END=104203226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 104203227 . C . PASS END=104203233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 104203234 . A . PASS END=104203234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 104203235 . T . PASS END=104203235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 104203236 . C . PASS END=104203239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 104203240 . A . PASS END=104203240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 104203241 . T . PASS END=104203255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 104203256 . A . PASS END=104203256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 104203257 . A . PASS END=104203267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 104203268 . C . PASS END=104203268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 104203269 . C . PASS END=104203269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 104203270 . G . PASS END=104203283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 104203284 . T . PASS END=104203285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 104203286 . T . PASS END=104203288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:17,0 chr1 104203289 . A . PASS END=104203290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 104203291 . A . PASS END=104203291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 104203292 . T . PASS END=104203292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 104203293 . G . PASS END=104203294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 104203295 . A . PASS END=104203295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 104203296 . A . PASS END=104203298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 104205279 . G . LowGQ END=104205397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:0:0,0,0:0,0,0:3,0 chr1 104205508 . G . LowGQ END=104205633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:2,0 chr1 104206953 . G . LowDepth;LowGQ END=104207142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104230071 . T . LowDepth;LowGQ END=104230260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104231580 . C . LowDepth;LowGQ END=104231705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104231816 . C . LowDepth;LowGQ END=104231934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104233916 . T . PASS END=104233928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 104233929 . A . PASS END=104233931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,557:0,32,255:14,0 chr1 104233932 . T . PASS END=104233952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:19,0 chr1 104233953 . G . PASS END=104233958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:22,0 chr1 104233959 . A . PASS END=104233959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 104233960 . C . PASS END=104233983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:22:0,66,845:0,66,255:26,0 chr1 104233984 . C . PASS END=104234015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1031:0,81,255:39,0 chr1 104234110 . C . PASS END=104234182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:32:0,86,1225:0,86,255:40,0 chr1 104234183 . A . PASS END=104234193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:29:0,63,945:0,71,255:25,0 chr1 104234194 . C . PASS END=104234196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,62,255:19,0 chr1 104234197 . T . PASS END=104234197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:13,0 chr1 104234198 . C . PASS END=104234199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:24:0,42,630:0,72,255:14,0 chr1 104234200 . G . PASS END=104234206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:33:20:0,33,495:0,60,255:13,0 chr1 104234207 . T . PASS END=104234209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 104234210 . A . PASS END=104234226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,41,255:13,0 chr1 104234227 . C . PASS END=104234229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 104234230 . T . PASS END=104234232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 104235049 . T . LowDepth;LowGQ END=104235182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104235922 . C . LowDepth;LowGQ END=104236152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104236601 . C . LowDepth;LowGQ END=104236798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104237602 . C . LowDepth;LowGQ END=104237748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104238094 . C . LowDepth;LowGQ END=104238261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104293092 . A . PASS END=104293101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:6,0 chr1 104293102 . T . PASS END=104293165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,225:0,21,225:8,0 chr1 104293166 . A . PASS END=104293167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 104293168 . C . PASS END=104293171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 104293172 . T . PASS END=104293238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,156:0,15,156:6,0 chr1 104293239 . A . PASS END=104293259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:2:0,3,45:0,6,70:2,0 chr1 104293605 . G . LowDepth;LowGQ END=104293751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104294555 . G . LowDepth;LowGQ END=104294752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104295201 . G . LowDepth;LowGQ END=104295431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104296171 . G . LowDepth;LowGQ END=104296304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104297121 . G . PASS END=104297133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:8,0 chr1 104297134 . G . PASS END=104297145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr1 104297146 . A . PASS END=104297151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:19,0 chr1 104297152 . T . PASS END=104297157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 104297158 . A . PASS END=104297158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 104297159 . G . PASS END=104297163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 104297164 . C . PASS END=104297164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 104297165 . T . PASS END=104297178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,732:0,66,255:24,0 chr1 104297179 . A . PASS END=104297179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 104297180 . A . PASS END=104297190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,961:0,65,255:26,0 chr1 104297191 . C . PASS END=104297199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,920:0,84,255:29,0 chr1 104297200 . C . PASS END=104297200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 104297201 . A . PASS END=104297243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:30:0,84,1260:0,90,255:40,0 chr1 104297337 . G . PASS END=104297353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1022:0,80,255:33,0 chr1 104297354 . T . PASS END=104297363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,86,255:25,0 chr1 104297364 . G . PASS END=104297364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:54:33:0,54,810:0,99,255:18,0 chr1 104297365 . C . PASS END=104297395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr1 104297396 . T . PASS END=104297436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:19,0 chr1 104299417 . G . LowDepth;LowGQ END=104299535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104299646 . G . LowDepth;LowGQ END=104299771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 104301091 . G . LowDepth;LowGQ END=104301280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 106396062 . G A, 50.00 PASS DP=52;MQ=249.85;MQRankSum=6.172;ReadPosRankSum=3.223;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,27,0:0.519,0.000:52:7,10,0:18,17,0:48:85,0,50,932,894,1826:255,0,255:24,0:5.0000e+01,6.5751e-05,5.2898e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,15,14,13:12,13,15,12 chr1 107599338 . A . PASS END=107599338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,674:0,46,255:20,0 chr1 107599339 . T . PASS END=107599352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:22,0 chr1 107599353 . A . PASS END=107599353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr1 107599354 . A . PASS END=107599408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:25,0 chr1 107599409 . A . PASS END=107599411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 107599412 . T . PASS END=107599430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 107599431 . G . PASS END=107599439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 107599440 . C . PASS END=107599462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:26,0 chr1 107599463 . A . PASS END=107599463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 107599464 . C . PASS END=107599466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,964:0,70,255:26,0 chr1 107599467 . G . PASS END=107599469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 107599470 . C . PASS END=107599494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:23,0 chr1 107599495 . A . PASS END=107599495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 107599496 . C . PASS END=107599518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,732:0,66,255:23,0 chr1 107599519 . T . PASS END=107599519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 107599520 . C . PASS END=107599526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:24,0 chr1 107599527 . C . PASS END=107599527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 107599528 . G . PASS END=107599541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,68,255:26,0 chr1 107599542 . G . PASS END=107599552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 107599553 . G . PASS END=107599553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 107599554 . G . PASS END=107599557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 107599558 . T . PASS END=107599558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 107599559 . C . PASS END=107599565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 107599566 . A . PASS END=107599569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:24,0 chr1 107599570 . G . PASS END=107599578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:29,0 chr1 107599579 . T . PASS END=107599582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1186:0,61,255:29,0 chr1 107599583 . A . PASS END=107599587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1169:0,80,255:28,0 chr1 107599588 . A . PASS END=107599632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,862:0,64,255:26,0 chr1 107599633 . T . PASS END=107599633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 107599634 . C . PASS END=107599639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 107599640 . C . PASS END=107599640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 107599641 . C . PASS END=107599664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 107599665 . G . PASS END=107599684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,53,255:19,0 chr1 107599685 . C . PASS END=107599691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 107599692 . C . PASS END=107599693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 107599694 . G . PASS END=107599696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 107599697 . C . PASS END=107599714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 107599715 . C . PASS END=107599750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 107599751 . A . PASS END=107599751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 107599752 . C . PASS END=107599755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 107599756 . T . PASS END=107599756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 107599757 . G . PASS END=107599759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 107599760 . G . PASS END=107599776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,745:0,49,255:19,0 chr1 107599777 . A . PASS END=107599777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 107599778 . A . PASS END=107599815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,706:0,54,255:19,0 chr1 107599816 . G . PASS END=107599816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 107599817 . A . PASS END=107599826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 107599827 . G . PASS END=107599827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 107599828 . A . PASS END=107599843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 107599844 . C . PASS END=107599849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 107599850 . C . PASS END=107599880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 107599881 . G . PASS END=107599881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 107599882 . G . PASS END=107599882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 107599883 . T . PASS END=107599886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,634:0,52,255:20,0 chr1 107599887 . C . PASS END=107599887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 107599888 . T . PASS END=107599888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 107599889 . C . PASS END=107599894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 107599895 . G . PASS END=107599895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 107599896 . G . PASS END=107599902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 107599903 . C . PASS END=107599903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 107599904 . C . PASS END=107599917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 107599918 . C T, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=0.843;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,13,0:0.520,0.000:25:8,6,0:4,7,0:48:85,0,50,460,400,861:255,0,255:11,0:5.0000e+01,6.5751e-05,5.2879e+01,4.5000e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,6,7:9,3,7,6 chr1 107599919 . C . PASS END=107599933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 107599934 . G . PASS END=107599955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,654:0,46,255:19,0 chr1 107599956 . T . PASS END=107599960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,674:0,57,255:19,0 chr1 107599961 . G . PASS END=107599974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 107599975 . A . PASS END=107599989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 107599990 . A . PASS END=107599991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr1 107599992 . A . PASS END=107599992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 107599993 . T . PASS END=107599997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 107599998 . T . PASS END=107599998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 107599999 . G . PASS END=107600005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 107600006 . G . PASS END=107600016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 107600017 . C . PASS END=107600020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 107600021 . C . PASS END=107600021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 107600022 . T . PASS END=107600022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 107600023 . G . PASS END=107600026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:15:0,36,540:0,38,255:14,0 chr1 107600027 . C . PASS END=107600028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 107600029 . T . PASS END=107600029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:14,0 chr1 107600030 . G . PASS END=107600039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 107600040 . G . PASS END=107600041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 107600042 . G . PASS END=107600042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 107600043 . A . PASS END=107600044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,413:0,28,255:12,0 chr1 107600045 . C . PASS END=107600047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 107600048 . T . PASS END=107600048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 107600049 . G . PASS END=107600055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 107600056 . G . PASS END=107600056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 107600057 . A . PASS END=107600068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 107600069 . G . PASS END=107600069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 107600070 . G . PASS END=107600091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 107600092 . G . PASS END=107600113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:16,0 chr1 107600114 . C . PASS END=107600114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 107600115 . C . PASS END=107600123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,690:0,51,255:18,0 chr1 107600124 . T . PASS END=107600124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:17,0 chr1 107600125 . T . PASS END=107600158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,657:0,41,255:19,0 chr1 107600159 . C . PASS END=107600159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 107600160 . T . PASS END=107600174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,698:0,54,255:18,0 chr1 107600175 . T . PASS END=107600175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:17,0 chr1 107600176 . A . PASS END=107600189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 107600190 . A . PASS END=107600208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,763:0,63,255:24,0 chr1 107600209 . G . PASS END=107600221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 107600222 . C . PASS END=107600223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 107600224 . T . PASS END=107600244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,86,255:29,0 chr1 107600245 . A . PASS END=107600275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,953:0,62,255:26,0 chr1 107600276 . C . PASS END=107600276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr1 107600277 . C . PASS END=107600283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,955:0,67,255:26,0 chr1 107600284 . C . PASS END=107600284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 107600285 . T . PASS END=107600285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 107600286 . C . PASS END=107600286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 107600287 . A . PASS END=107600287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 107600288 . C . PASS END=107600293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 107600294 . A . PASS END=107600294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 107600295 . C . PASS END=107600314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1096:0,83,255:30,0 chr1 107600315 . C . PASS END=107600315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 107600316 . G . PASS END=107600325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 107600326 . A . PASS END=107600326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 107600327 . A . PASS END=107600334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1058:0,90,255:30,0 chr1 107600335 . A . PASS END=107600335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 107600336 . A . PASS END=107600337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 107600338 . A . PASS END=107600338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,918:0,60,255:26,0 chr1 107600339 . C . PASS END=107600344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 107600345 . C . PASS END=107600372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 107600373 . T . PASS END=107600373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 107600374 . C . PASS END=107600382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,911:0,67,255:26,0 chr1 107600383 . A . PASS END=107600389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 107600390 . T . PASS END=107600390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 107600391 . C . PASS END=107600392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 107600393 . C . PASS END=107600393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 107600394 . C . PASS END=107600400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 107600401 . T . PASS END=107600402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 107600403 . C . PASS END=107600403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 107600404 . T . PASS END=107600417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,77,255:26,0 chr1 107600418 . G . PASS END=107600418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr1 107600419 . T . PASS END=107600423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 107600424 . G . PASS END=107600424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 107600425 . A . PASS END=107600433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 107600434 . A . PASS END=107600434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 107600435 . G . PASS END=107600449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,65,255:22,0 chr1 107600450 . T . PASS END=107600464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:19:0,48,720:0,50,255:19,0 chr1 107600465 . A . PASS END=107600465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 107691216 . A . PASS END=107691216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 107691217 . T . PASS END=107691217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:29,0 chr1 107691218 . G . PASS END=107691222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:31,0 chr1 107691223 . T . PASS END=107691223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:30,0 chr1 107691224 . G . PASS END=107691230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1083:0,83,255:33,0 chr1 107691231 . T . PASS END=107691231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1132:0,52,255:31,0 chr1 107691232 . T . PASS END=107691245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1203:0,86,255:34,0 chr1 107691246 . G . PASS END=107691246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1127:0,36,255:30,0 chr1 107691247 . C . PASS END=107691249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:32,0 chr1 107691250 . T . PASS END=107691250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1042:0,36,255:31,0 chr1 107691251 . T . PASS END=107691251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:30,0 chr1 107691252 . T . PASS END=107691252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr1 107691253 . G . PASS END=107691263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:41:0,93,1383:0,93,255:38,0 chr1 107691264 . T . PASS END=107691264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1510:0,74,255:37,0 chr1 107691265 . C . PASS END=107691450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,83,255:40,0 chr1 107691451 . T . PASS END=107691457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,80,255:26,0 chr1 107691458 . A . PASS END=107691458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:22,0 chr1 107691459 . A . PASS END=107691461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:27:0,66,990:0,70,255:22,0 chr1 107866904 . G . PASS END=107867532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:84:32:0,84,1157:0,89,255:40,0 chr1 107867533 . G . PASS END=107867533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:27,0 chr1 107867534 . G . PASS END=107867539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,92,255:29,0 chr1 107867540 . G . PASS END=107867544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:61:31:0,61,1170:0,61,255:26,0 chr1 107937776 . G . PASS END=107937784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 107937785 . T . PASS END=107937809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:28:0,83,1003:0,83,255:34,0 chr1 107937810 . T . PASS END=107937810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:33,0 chr1 107937811 . A . PASS END=107937918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,89,255:40,0 chr1 107937919 . T . PASS END=107937919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:27,0 chr1 107937920 . C . PASS END=107937921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 107937922 . C . PASS END=107937948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,817:0,68,255:27,0 chr1 107950304 . G . PASS END=107950338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:94:0,120,1800:0,234,255:40,0 chr1 107961202 . A . PASS END=107961281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:72:0,120,1800:0,200,255:40,0 chr1 107963706 . T . PASS END=107963765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,193,255:40,0 chr1 107973359 . T . PASS END=107973359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 107973372 . A . PASS END=107973531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:45:0,84,1260:0,115,255:40,0 chr1 107973532 . G . PASS END=107973539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:63:34:0,63,945:0,102,255:23,0 chr1 107979287 . A . PASS END=107979287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 107979288 . G . PASS END=107979358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:34:0,80,1235:0,80,255:40,0 chr1 107979359 . G . PASS END=107979395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,102,1411:0,108,255:40,0 chr1 107979396 . A C, 160.91 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,18,0:0,20,0:111:199,114,0,1444,114,1444:255,114,0:0,0:1.6091e+02,1.1091e+02,0.0000e+00,4.5000e+02,1.4568e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,20:0,0,20,18 chr1 107979397 . A . PASS END=107979414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,98,255:34,0 chr1 107979415 . T . PASS END=107979420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1070:0,79,255:27,0 chr1 107979421 . C . PASS END=107979421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 108023233 . C . PASS END=108023244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 108023245 . A . PASS END=108023261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 108023262 . T . PASS END=108023262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 108023263 . G . PASS END=108023266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 108023267 . G . PASS END=108023267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 108023268 . A . PASS END=108023270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 108023271 . G . LowGQ END=108023271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 108023272 . G . PASS END=108023279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 108023280 . T . PASS END=108023299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr1 108023300 . C . PASS END=108023300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 108023301 . C . PASS END=108023317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:18,0 chr1 108023318 . C . PASS END=108023324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 108023325 . A . PASS END=108023325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 108023326 . T . PASS END=108023336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr1 108023337 . A . PASS END=108023337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:21,0 chr1 108023338 . A . PASS END=108023342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 108023343 . C . PASS END=108023355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,759:0,50,255:19,0 chr1 108023356 . C . PASS END=108023369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 108023370 . T . PASS END=108023418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 108023419 . T . PASS END=108023423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 108023424 . A . PASS END=108023428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 108023429 . G . PASS END=108023462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 108115953 . T . PASS END=108115994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,120,1800:0,135,255:40,0 chr1 108116669 . C . PASS END=108116778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:34:0,90,1291:0,98,255:40,0 chr1 108116779 . C . PASS END=108116779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:29,0 chr1 108116780 . A . PASS END=108116786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,92,255:29,0 chr1 108116787 . G . PASS END=108116788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 108116789 . G . PASS END=108116789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:24,0 chr1 108116790 . A . PASS END=108116810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,929:0,62,255:26,0 chr1 108116811 . G . PASS END=108116820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 108119014 . C . PASS END=108119097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,161,255:40,2 chr1 108138324 . T . PASS END=108138325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:106:0,120,1800:0,255,255:40,0 chr1 108138834 . A . PASS END=108138941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:33:0,96,1268:0,99,255:40,0 chr1 108138942 . G . PASS END=108138942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1324:0,76,255:34,0 chr1 108138943 . C . PASS END=108138952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:39:0,81,1215:0,93,255:36,0 chr1 108138953 . T . PASS END=108138953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:27,0 chr1 108138954 . C . PASS END=108138963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,89,255:29,0 chr1 108145019 . C . PASS END=108145106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,3:85:99:75:0,120,1800:0,188,255:40,0 chr1 108145669 . T . PASS END=108145785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,117,1755:0,125,255:40,0 chr1 108152553 . C . PASS END=108152587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:83:0,120,1800:0,233,255:40,0 chr1 108160189 . A . PASS END=108160215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:79:0,120,1800:0,169,255:40,0 chr1 108160216 . T . PASS END=108160254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:96:93:0,96,1440:0,173,255:40,0 chr1 108185241 . C . PASS END=108185261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:26,0 chr1 108185262 . A . PASS END=108185267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,889:0,61,255:26,0 chr1 108185268 . T . PASS END=108185268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 108185269 . T . PASS END=108185269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 108185270 . T . PASS END=108185300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:29,0 chr1 108185301 . C G, 41.34 PASS DP=31;MQ=250.00;MQRankSum=4.416;ReadPosRankSum=3.529;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,10,0:0.323,0.000:31:10,8,0:11,2,0:41:76,0,50,358,743,1101:255,0,255:19,0:4.1338e+01,3.4093e-04,5.3000e+01,3.5762e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,6,4:8,13,6,4:108185301 chr1 108185302 . T . PASS END=108185308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 108185309 . G A, 37.20 PASS DP=31;MQ=250.00;MQRankSum=4.287;ReadPosRankSum=4.287;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,9,0:0.290,0.000:31:10,7,0:12,2,0:37:72,0,50,285,769,1054:225,0,255:20,0:3.7201e+01,8.4914e-04,5.3001e+01,2.8508e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,5,4:9,13,7,2:108185301 chr1 108185310 . G . PASS END=108185312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 108185313 . T . PASS END=108185313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 108185314 . C . PASS END=108185322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:30,0 chr1 108185323 . A . PASS END=108185335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:22:0,63,845:0,66,255:25,0 chr1 108185336 . G . PASS END=108185348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:19:0,47,743:0,47,255:19,0 chr1 108185349 . G . PASS END=108185353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 108185354 . T . PASS END=108185354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 108185355 . A . PASS END=108185356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 108185357 . T . PASS END=108185357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 108185358 . G . PASS END=108185365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 108185366 . T . PASS END=108185366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 108185367 . C . PASS END=108185369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 108185370 . T . PASS END=108185371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 108185372 . G . PASS END=108185375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 108185376 . A . PASS END=108185376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr1 108185377 . C . PASS END=108185377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 108212006 . T . PASS END=108212094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:48:0,90,1710:0,90,255:40,0 chr1 108226110 . C . PASS END=108226155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,120,1800:0,140,255:40,0 chr1 108231003 . C . PASS END=108231053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:88:0,120,1800:0,248,255:40,0 chr1 108247172 . C . PASS END=108247256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,148,255:40,0 chr1 108247257 . T . PASS END=108247257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1603:0,72,255:40,0 chr1 108247258 . T . PASS END=108247272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,111,1665:0,135,255:40,0 chr1 108247582 . C . PASS END=108247622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1133:0,88,255:34,0 chr1 108247623 . G . PASS END=108247623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr1 108247624 . A . PASS END=108247653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1170:0,83,255:33,0 chr1 108247654 . G . PASS END=108247672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,78,255:26,0 chr1 108247673 . T . PASS END=108247683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,668:0,43,255:18,0 chr1 108291590 . A . PASS END=108291699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:41:0,114,1710:0,123,255:40,0 chr1 108292084 . C . PASS END=108292216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,104,1629:0,104,255:40,0 chr1 108293739 . C . PASS END=108293824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:51:0,114,1800:0,114,255:40,0 chr1 108298049 . C . PASS END=108298135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:65:0,120,1800:0,171,255:40,0 chr1 108299883 . C . PASS END=108299951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:59:0,120,1800:0,144,255:40,0 chr1 108303406 . C . PASS END=108303501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,120,1800:0,132,255:40,0 chr1 108307698 . C . PASS END=108307797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,104,1435:0,104,255:40,0 chr1 108309069 . C . PASS END=108309172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:72:0,120,1800:0,201,255:40,0 chr1 108311063 . A . PASS END=108311131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:75:0,120,1800:0,207,255:40,0 chr1 108313258 . C T, 50.00 PASS DP=67;MQ=250.00;MQRankSum=7.010;ReadPosRankSum=4.873;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,36,0:0.537,0.000:67:18,15,0:13,21,0:48:85,0,50,1169,1093,2262:255,0,255:31,0:5.0000e+01,6.7045e-05,5.2628e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,10,23,13:18,13,14,22 chr1 108313259 . T . PASS END=108313295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:68:0,120,1800:0,199,255:40,0 chr1 108313296 . C . PASS END=108313350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,168,255:40,0 chr1 108315357 . G . PASS END=108315465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,159,255:40,0 chr1 108319853 . T . PASS END=108319918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:64:0,120,1800:0,160,255:40,0 chr1 108322056 . C . PASS END=108322114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,110,1463:0,110,255:40,0 chr1 108328080 . A . PASS END=108328118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,112,1798:0,112,255:40,0 chr1 108329218 . C . PASS END=108329250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,198,255:40,0 chr1 108417523 . C . PASS END=108417639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:95:40:0,95,1355:0,95,255:40,0 chr1 108507288 . C . PASS END=108507319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,654:0,54,255:19,0 chr1 108507320 . T . PASS END=108507320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 108507321 . C . PASS END=108507334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,623:0,43,255:19,0 chr1 108507335 . G . PASS END=108507335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 108507336 . C . PASS END=108507336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 108507337 . G . PASS END=108507343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 108507344 . G . PASS END=108507344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 108507345 . G . PASS END=108507345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 108507346 . T . PASS END=108507346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 108507347 . T . PASS END=108507359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,870:0,69,255:24,0 chr1 108507360 . G . PASS END=108507362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 108507363 . G . PASS END=108507364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 108507365 . G . PASS END=108507365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:20,0 chr1 108507366 . C . PASS END=108507371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr1 108507372 . T . PASS END=108507372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 108507373 . C . PASS END=108507400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:23,0 chr1 108507401 . A . PASS END=108507401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 108507402 . C . PASS END=108507411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 108507412 . G . PASS END=108507435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 108507436 . G . PASS END=108507437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:17:0,39,585:0,51,255:13,0 chr1 108507438 . G . PASS END=108507442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 108507443 . G . PASS END=108507450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:15:0,32,565:0,32,255:13,0 chr1 108507451 . C . PASS END=108507452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 108507453 . A . PASS END=108507474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 108507475 . T . PASS END=108507484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 108507485 . G . PASS END=108507485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 108507486 . C . PASS END=108507491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 108679275 . T . PASS END=108679277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr1 108679278 . T . PASS END=108679278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 108679279 . T . PASS END=108679288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 108679289 . C . PASS END=108679297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 108679298 . T . PASS END=108679302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr1 108679303 . T . PASS END=108679303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 108679304 . T . PASS END=108679307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 108679308 . A . PASS END=108679308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 108679309 . T . PASS END=108679316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1036:0,87,255:31,0 chr1 108679317 . A . PASS END=108679317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 108679318 . A . PASS END=108679339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1036:0,80,255:40,2 chr1 108679340 . C . PASS END=108679340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1598:0,69,255:40,2 chr1 108679341 . A . PASS END=108679414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:40:0,91,1408:0,91,255:40,0 chr1 108679415 . G . PASS END=108679415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:35,0 chr1 108679416 . A . PASS END=108679435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,95,255:37,0 chr1 108679436 . G . PASS END=108679436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:24,0 chr1 108679437 . C . PASS END=108679443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:28,0 chr1 108679444 . G . PASS END=108679451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,67,255:23,0 chr1 108679452 . T . PASS END=108679452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:19,0 chr1 108679453 . A . PASS END=108679458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:21:0,63,754:0,63,255:21,0 chr1 108679459 . G . PASS END=108679459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 108681680 . C . PASS END=108681686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 108681687 . C . PASS END=108681727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:24,0 chr1 108681728 . G . PASS END=108681729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 108681730 . T . PASS END=108681730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 108681731 . G . PASS END=108681772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:33,0 chr1 108681773 . T . PASS END=108681799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,898:0,62,255:26,0 chr1 108681800 . C . PASS END=108681800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 108681801 . A . PASS END=108681811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 108681812 . G . PASS END=108681825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:17,0 chr1 108681826 . A . PASS END=108681828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 108681829 . A . PASS END=108681829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:11,0 chr1 108681830 . G . PASS END=108681830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:12,0 chr1 108686165 . C . PASS END=108686332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:39:0,84,1325:0,84,255:40,0 chr1 108690901 . C . PASS END=108691008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,162,255:40,0 chr1 108697605 . C . PASS END=108697606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,963:0,67,255:26,0 chr1 108697607 . G . PASS END=108697607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 108697608 . T . PASS END=108697608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 108697609 . T . PASS END=108697610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 108697611 . A . PASS END=108697611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 108697612 . T . PASS END=108697616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 108697617 . C . PASS END=108697619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 108697620 . G . PASS END=108697627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 108697628 . C . PASS END=108697628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 108697629 . A . PASS END=108697633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1056:0,87,255:30,0 chr1 108697634 . T . PASS END=108697634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:29,0 chr1 108697635 . C . PASS END=108697741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1058:0,81,255:40,0 chr1 108697742 . A . PASS END=108697742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:27,0 chr1 108697743 . T . PASS END=108697757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1022:0,86,255:31,0 chr1 108699323 . C . PASS END=108699507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:75:0,120,1800:0,175,255:40,0 chr1 108700084 . C . PASS END=108700095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:30,0 chr1 108700096 . T . PASS END=108700096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 108700097 . T . PASS END=108700242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:30:0,90,1058:0,90,255:40,2 chr1 108703804 . T . PASS END=108703915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:33:0,84,1194:0,86,255:40,0 chr1 108724563 . C . PASS END=108724650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,123,255:40,0 chr1 108728450 . C . PASS END=108728576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:96:43:0,96,1607:0,96,255:40,0 chr1 108735118 . C . PASS END=108735243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:47:0,111,1665:0,141,255:40,0 chr1 108742551 . T . PASS END=108742679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:36:0,87,1305:0,95,255:40,0 chr1 108742680 . G . PASS END=108742716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 108742717 . C . PASS END=108742727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 108742728 . G . PASS END=108742734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 108742735 . A . PASS END=108742753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 108742754 . G . PASS END=108742760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:13,0 chr1 108766327 . T . PASS END=108766368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,118,1800:0,118,255:40,0 chr1 108769301 . C . PASS END=108769398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:46:0,111,1665:0,138,255:40,0 chr1 108769399 . A . PASS END=108769399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:35,0 chr1 108769400 . G . PASS END=108769428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,89,255:39,0 chr1 108769429 . C . PASS END=108769448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:25,0 chr1 108769449 . C . PASS END=108769449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 108769450 . C . PASS END=108769453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:22,0 chr1 108769454 . A . PASS END=108769454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 108769455 . A . PASS END=108769463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,756:0,66,255:22,0 chr1 108769464 . T . PASS END=108769479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,677:0,44,255:19,0 chr1 108769480 . G . PASS END=108769480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 108769481 . G . PASS END=108769482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 108769483 . T . PASS END=108769483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,489:0,34,255:15,0 chr1 108769484 . C . PASS END=108769486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 108769487 . C . PASS END=108769512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 108769513 . G . PASS END=108769513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 108769514 . C . PASS END=108769515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 108771542 . C . PASS END=108771542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 108771543 . T . PASS END=108771544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 108771545 . G . PASS END=108771547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 108771548 . A . PASS END=108771548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 108771549 . G . PASS END=108771558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:17,0 chr1 108771559 . T . PASS END=108771559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 108771560 . T . PASS END=108771579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:19,0 chr1 108771580 . G . PASS END=108771592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 108771593 . T . PASS END=108771593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 108771594 . G . PASS END=108771604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:26,0 chr1 108771605 . G . PASS END=108771609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 108771610 . C . PASS END=108771628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 108771629 . C . PASS END=108771642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1155:0,80,255:34,0 chr1 108771643 . T . PASS END=108771643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:31,0 chr1 108771644 . G . PASS END=108771683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1233:0,86,255:38,0 chr1 108771684 . T . PASS END=108771684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 108771685 . G . PASS END=108771764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:34:0,85,1305:0,85,255:40,0 chr1 108771765 . C . PASS END=108771766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:27,0 chr1 108771767 . C . PASS END=108771769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1208:0,83,255:29,0 chr1 108771770 . C . PASS END=108771771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 108771772 . G . PASS END=108771772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,994:0,24,255:24,0 chr1 108771773 . T . PASS END=108771776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:25,0 chr1 108771777 . G . PASS END=108771777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,984:0,40,255:21,0 chr1 108771778 . G . PASS END=108771778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 108774878 . A . LowDepth;LowGQ END=108775050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108775782 . C . LowDepth;LowGQ END=108775784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108775785 . G . LowDepth END=108775833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 108776864 . T . LowDepth;LowGQ END=108776898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108776899 . A . LowDepth;LowGQ END=108777033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108777858 . C . PASS END=108777909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:6,0 chr1 108778892 . C . LowDepth;LowGQ END=108779031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108779633 . C . LowDepth;LowGQ END=108779719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108779909 . C . LowDepth;LowGQ END=108779960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108781370 . C . LowDepth;LowGQ END=108781581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108782450 . C . LowDepth;LowGQ END=108782528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108783572 . C . PASS END=108783785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,31:0,3,31:3,0 chr1 108783786 . C . PASS END=108783786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 108784696 . C . LowDepth;LowGQ END=108784795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108786206 . T . PASS END=108786226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 108786227 . C . PASS END=108786235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 108786236 . A . PASS END=108786280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:18,0 chr1 108786281 . A . PASS END=108786292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr1 108786293 . T . PASS END=108786293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 108786294 . C . PASS END=108786309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 108786310 . C . PASS END=108786325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 108786326 . T . PASS END=108786330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 108786331 . A . PASS END=108786332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 108786333 . G . PASS END=108786334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 108786335 . T . PASS END=108786335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 108786336 . G . PASS END=108786336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 108786337 . T . PASS END=108786337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 108786338 . T . PASS END=108786340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 108786341 . T . PASS END=108786341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:10,0 chr1 108786342 . C . PASS END=108786369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr1 108786370 . G . PASS END=108786383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr1 108990375 . A . PASS END=108990385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 108990386 . G . PASS END=108990386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 108990387 . G . PASS END=108990387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:10,0 chr1 108990388 . A . PASS END=108990390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 108990391 . A . PASS END=108990391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 108990392 . G . PASS END=108990393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 108992891 . A . LowDepth;LowGQ END=108992994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 108992995 . G . PASS END=108992995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 108992996 . C . LowGQ END=108992996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 108992997 . C . PASS END=108993011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 108993012 . C . PASS END=108993017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr1 108993018 . T . PASS END=108993067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,305:0,30,255:11,0 chr1 108993068 . C . PASS END=108993068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 108993069 . A . PASS END=108993079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,337:0,33,255:11,0 chr1 108993080 . C . PASS END=108993080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 108993081 . T . PASS END=108993081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 108993082 . C . PASS END=108993082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 108993083 . A . PASS END=108993086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 108993189 . T . PASS END=108993227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,252:0,24,252:9,0 chr1 108993228 . T . PASS END=108993234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 108993235 . T . PASS END=108993244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 108993245 . T . PASS END=108993275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,178:6,0 chr1 108993276 . T . LowGQ END=108993276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 108993277 . A . PASS END=108993301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 108993302 . C . PASS END=108993307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 108993308 . G . PASS END=108993338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 108993339 . A . LowGQ END=108993401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,61:0,0,69:3,0 chr1 108994812 . A . PASS END=108994814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 108994815 . G . PASS END=108994829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 108994830 . A . PASS END=108994845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 108994846 . G . PASS END=108994887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 108994888 . G . PASS END=108994902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 108994903 . G T, 0.01 DRAGENSnpHardQUAL DP=11;MQ=23.02;MQRankSum=1.423;ReadPosRankSum=1.423;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:7,0,0:3,1,0:29:6,0,27,36,350,385:6,0,255:10,0:5.3524e-03,2.9101e+01,5.9101e+01,6.4869e+01,4.1340e+02,4.1740e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,1,0:6,4,0,1 chr1 108994904 . G . PASS END=108994911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 108995803 . G . PASS END=108995810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 108995811 . A . PASS END=108995855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 108995856 . A . LowGQ END=108995954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,39:3,0 chr1 108995955 . T . LowDepth;LowGQ END=108996017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108997061 . A . LowDepth;LowGQ END=108997139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108998008 . A . LowDepth;LowGQ END=108998219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108999629 . A . LowDepth;LowGQ END=108999680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 108999870 . G . LowDepth;LowGQ END=108999956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 109000558 . A . LowDepth;LowGQ END=109000697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 109001680 . A . PASS END=109001688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 109001689 . G A, 14.21 PASS DP=4;MQ=15.08;MQRankSum=-0.727;ReadPosRankSum=0.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,3,0:0.750,0.000:4:1,2,0:0,1,0:13:49,0,17,107,36,143:104,0,27:1,0:1.4211e+01,2.1130e-01,2.0192e+01,1.0748e+02,7.0747e+01,1.4625e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,1,2:1,0,2,1 chr1 109001690 . T . PASS END=109001726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 109001727 . C . PASS END=109001731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 109002555 . G . LowDepth;LowGQ END=109002576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr1 109002577 . G A, 5.47 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4664e+00,4.4678e+00,4.4580e+00,4.0236e+01,3.9238e+01,4.3236e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,1,0 chr1 109002578 . T . LowDepth END=109002614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 109002615 . A . LowDepth;LowGQ END=109002664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr1 109002665 . C . LowDepth;LowGQ END=109002689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 109002690 . T . LowDepth;LowGQ END=109002724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 109003755 . A . LowDepth;LowGQ END=109003806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 109004538 . G . LowDepth;LowGQ END=109004710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 109007810 . C . PASS END=109007824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 109007825 . C . PASS END=109007825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 109007826 . C . PASS END=109007834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,274:0,27,255:9,0 chr1 109007835 . A . PASS END=109007835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 109007836 . G . PASS END=109007837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 109007838 . G . PASS END=109007840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 109007841 . T . PASS END=109007841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 109007842 . T . PASS END=109007851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 109007852 . A . PASS END=109007852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 109007853 . C . PASS END=109007882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,480:0,39,255:13,0 chr1 109007883 . T . PASS END=109007883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 109007884 . T . PASS END=109007922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:13,0 chr1 109007923 . T . PASS END=109007923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 109007924 . G . PASS END=109007926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 109007927 . T . PASS END=109007944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,333:0,27,255:9,0 chr1 109007945 . A . PASS END=109007945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 109007946 . A . PASS END=109007955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 109007956 . T . PASS END=109007960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 109007961 . G . PASS END=109007962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 109007963 . A . PASS END=109008004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr1 109008005 . T . LowGQ END=109008005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:16,0,110:4,0 chr1 109008006 . C . PASS END=109008037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr1 109008038 . C . PASS END=109008038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,178:3,0 chr1 109008039 . C . PASS END=109008046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:4,0 chr1 109010073 . A . PASS END=109010084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr1 109010085 . A . PASS END=109010086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,427:0,25,255:10,0 chr1 109010087 . C . PASS END=109010094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 109010095 . G . PASS END=109010095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 109010096 . G . PASS END=109010102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:14:0,31,540:0,31,255:14,0 chr1 109010103 . A . PASS END=109010109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 109010110 . T . PASS END=109010110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 109010111 . C . PASS END=109010149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr1 109010150 . A . PASS END=109010150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 109010151 . A . PASS END=109010173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,681:0,41,255:19,0 chr1 109010174 . G . PASS END=109010175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 109010176 . C . PASS END=109010176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 109010177 . C . PASS END=109010184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:23,0 chr1 109010185 . T . PASS END=109010185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 109010186 . G . PASS END=109010244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:26,0 chr1 109010245 . A . PASS END=109010245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 109010246 . C . PASS END=109010278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,853:0,69,255:23,0 chr1 109010279 . A . PASS END=109010279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 109010280 . G . PASS END=109010280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,0 chr1 109010281 . T . PASS END=109010287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 109013219 . A . PASS END=109013260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,161,255:40,1 chr1 109103051 . A . PASS END=109103053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 109103054 . A . PASS END=109103054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 109103055 . T . PASS END=109103055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,1 chr1 109103056 . G . PASS END=109103057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:18:0,2,464:0,2,255:17,1 chr1 109103058 . A . PASS END=109103058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,641:0,22,255:17,1 chr1 109103059 . G . PASS END=109103060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:17,0 chr1 109103061 . A . PASS END=109103064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 109103065 . G . PASS END=109103065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr1 109103066 . A . PASS END=109103066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,471:0,4,255:15,0 chr1 109103067 . A . PASS END=109103075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,592:0,40,255:19,0 chr1 109103076 . T . PASS END=109103079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 109103080 . G . PASS END=109103080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,596:0,27,255:18,0 chr1 109103081 . G . PASS END=109103082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 109103083 . G . PASS END=109103083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 109103084 . G . PASS END=109103086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:21,0 chr1 109103087 . T . PASS END=109103087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 109103088 . T . PASS END=109103088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 109103089 . C . PASS END=109103089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 109103090 . G . PASS END=109103093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109103094 . T . PASS END=109103094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 109103095 . C . PASS END=109103098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109103099 . G . PASS END=109103099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109103100 . A . PASS END=109103108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 109103109 . C . PASS END=109103109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 109103110 . A . PASS END=109103113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 109103114 . C . PASS END=109103114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,698:0,14,255:21,0 chr1 109103115 . C . PASS END=109103116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 109103117 . T . PASS END=109103117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 109103118 . T . PASS END=109103139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,876:0,69,255:24,0 chr1 109103140 . C . PASS END=109103140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 109103141 . A . PASS END=109103141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 109103142 . A . PASS END=109103142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:20,0 chr1 109103143 . G . PASS END=109103149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 109103150 . C . PASS END=109103164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:19,0 chr1 109103165 . A . PASS END=109103165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:16,0 chr1 109103166 . G . PASS END=109103172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 109103173 . C . PASS END=109103186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,34,255:13,0 chr1 109103187 . G . PASS END=109103187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 109143188 . G . PASS END=109143308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:45:0,108,1620:0,129,255:40,0 chr1 109148845 . G . PASS END=109148874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:98:0,120,1800:0,251,255:40,0 chr1 109154800 . C . PASS END=109154916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,105,1286:0,106,255:40,0 chr1 109159004 . G . PASS END=109159050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:64:0,120,1800:0,192,255:40,0 chr1 109167267 . G . PASS END=109167370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,117,1755:0,126,255:40,0 chr1 109170789 . A . PASS END=109170884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,105,1488:0,105,255:40,0 chr1 109171017 . G . PASS END=109171195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:86:32:0,86,1233:0,86,255:40,0 chr1 109171196 . A . PASS END=109171196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 109171197 . A . PASS END=109171197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 109171198 . A . PASS END=109171198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:30,0 chr1 109171199 . C . PASS END=109171206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:31,0 chr1 109171299 . A . PASS END=109171426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1233:0,86,255:40,0 chr1 109172210 . A . PASS END=109172279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,179,255:40,0 chr1 109177730 . G . PASS END=109177772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,120,1800:0,129,255:40,0 chr1 109191188 . T . PASS END=109191504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1039:0,80,255:40,0 chr1 109191505 . T . PASS END=109191505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:29,0 chr1 109191506 . T . PASS END=109191509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 109191510 . A . PASS END=109191510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 109191511 . G . PASS END=109191513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 109191514 . G . PASS END=109191514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 109191515 . G . PASS END=109191528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 109191529 . T . PASS END=109191529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 109191530 . T . PASS END=109191534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr1 109191535 . C . PASS END=109191535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 109191536 . T . PASS END=109191544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 109191545 . C . PASS END=109191546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1108:0,77,255:26,0 chr1 109191547 . C . PASS END=109191548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109191549 . T . PASS END=109191592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 109191593 . T . PASS END=109191596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,59,255:19,0 chr1 109191597 . T . PASS END=109191600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109191601 . A . PASS END=109191601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 109191602 . G . PASS END=109191606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 109191607 . T . PASS END=109191613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109192833 . A . PASS END=109192997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:35:0,96,1440:0,101,255:40,0 chr1 109192998 . C . PASS END=109192998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 109192999 . A . PASS END=109193007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:28,0 chr1 109193008 . G . PASS END=109193008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 109193009 . C . PASS END=109193010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 109193652 . C . PASS END=109193826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1260:0,81,255:40,0 chr1 109193827 . C . PASS END=109193827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 109193828 . T . PASS END=109193829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109193830 . T . PASS END=109193831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 109197338 . A . PASS END=109197472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,107,1482:0,107,255:40,0 chr1 109198208 . C . PASS END=109198320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,120,1800:0,145,255:40,0 chr1 109200073 . C . PASS END=109200196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:38:0,93,1395:0,98,255:40,0 chr1 109200197 . C . PASS END=109200201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:69:38:0,69,1035:0,113,255:24,0 chr1 109202486 . C . PASS END=109202506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,159,255:40,0 chr1 109203585 . T . PASS END=109203597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1411:0,104,255:40,0 chr1 109203598 . T . PASS END=109203629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,105,1551:0,113,255:40,0 chr1 109235214 . A . PASS END=109235214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 109235215 . T . PASS END=109235216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr1 109235217 . G . PASS END=109235221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 109235222 . C . PASS END=109235225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109235226 . A . PASS END=109235226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 109235227 . G . LowGQ END=109235227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,327:27,0,255:12,0 chr1 109235228 . C . PASS END=109235229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 109235230 . C . PASS END=109235232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109235233 . C . PASS END=109235233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 109235234 . G . PASS END=109235234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,445:0,14,255:13,0 chr1 109235235 . C . PASS END=109235236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 109235237 . G . PASS END=109235237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 109235238 . A . PASS END=109235241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,520:0,31,255:13,0 chr1 109235242 . G . PASS END=109235242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:12,0 chr1 109235243 . C . PASS END=109235244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,443:0,1,255:13,0 chr1 109235245 . A . PASS END=109235246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 109235247 . T . LowGQ END=109235247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,410:24,0,255:11,0 chr1 109235248 . C . PASS END=109235248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 109235249 . G . PASS END=109235249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:13,0 chr1 109235250 . C . LowGQ END=109235250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,434:2,0,255:12,0 chr1 109235251 . A . PASS END=109235251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 109235252 . G . PASS END=109235252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:12,0 chr1 109235253 . C . PASS END=109235254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 109235255 . G . PASS END=109235255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:14,0 chr1 109235256 . C . PASS END=109235261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 109235262 . C . PASS END=109235265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 109235266 . C . PASS END=109235266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:12,0 chr1 109235267 . G . PASS END=109235267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:12,0 chr1 109235268 . G . PASS END=109235268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 109235269 . C . PASS END=109235270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 109235271 . G . PASS END=109235272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 109235273 . A . PASS END=109235273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 109235274 . G . PASS END=109235275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 109235276 . T . PASS END=109235276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:15,0 chr1 109235277 . G . PASS END=109235280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 109235281 . C . PASS END=109235281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 109235282 . T . PASS END=109235286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 109235287 . A . PASS END=109235287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr1 109235288 . A . PASS END=109235297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr1 109235298 . T . PASS END=109235298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,1 chr1 109235299 . G . PASS END=109235302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:19:0,21,655:0,21,255:19,1 chr1 109235303 . C . PASS END=109235310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109235311 . G . PASS END=109235311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109235312 . C . PASS END=109235312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 109235313 . G . PASS END=109235320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 109235321 . G . PASS END=109235321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 109235322 . C . PASS END=109235357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:25,0 chr1 109235358 . C . PASS END=109235360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 109235361 . T . PASS END=109235368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 109235369 . C . PASS END=109235379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 109235380 . T . PASS END=109235391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,1000:0,78,255:26,0 chr1 109235392 . C . PASS END=109235393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 109235394 . A . PASS END=109235394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 109235395 . T . PASS END=109235406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 109235407 . A . PASS END=109235408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1086:0,77,255:27,0 chr1 109235409 . A . PASS END=109235422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 109235423 . T . PASS END=109235451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr1 109235452 . A . PASS END=109235452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 109235453 . G . PASS END=109235474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 109235475 . G . PASS END=109235485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 109235486 . T . PASS END=109235489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,41,255:13,0 chr1 109238324 . G . PASS END=109238392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,108,1620:0,127,255:40,0 chr1 109238665 . G . PASS END=109238669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1125:0,82,255:32,0 chr1 109238670 . A . PASS END=109238670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1065:0,52,255:29,0 chr1 109238671 . G . PASS END=109238777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:33:0,93,1311:0,95,255:40,0 chr1 109238778 . C . PASS END=109238778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1223:0,64,255:32,0 chr1 109238779 . T . PASS END=109238783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:35,0 chr1 109238784 . A . PASS END=109238788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:66:36:0,66,990:0,97,255:25,0 chr1 109238789 . T . PASS END=109238797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1041:0,84,255:28,0 chr1 109238798 . T . PASS END=109238804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 109238805 . T . PASS END=109238806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109238807 . T . PASS END=109238809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 109238810 . A . PASS END=109238816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 109238899 . A . PASS END=109238973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,168,255:40,0 chr1 109239362 . T . PASS END=109239376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:93:0,120,1800:0,255,255:40,0 chr1 109240432 . A . PASS END=109240471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:98:50:0,98,1606:0,98,255:40,0 chr1 109240480 . A . PASS END=109240485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,140,255:40,0 chr1 109241226 . G . PASS END=109241445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:32:0,81,1260:0,81,255:40,0 chr1 109241446 . C . PASS END=109241449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:63:39:0,63,945:0,117,255:22,0 chr1 109241784 . G . PASS END=109241789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 109241790 . A . PASS END=109241790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 109241791 . A . PASS END=109241803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,817:0,65,255:26,0 chr1 109241804 . G . PASS END=109241811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 109241812 . A . PASS END=109241812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 109241813 . G . PASS END=109241817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr1 109241818 . C . PASS END=109241831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,999:0,71,255:26,0 chr1 109241832 . A . PASS END=109241833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 109241834 . G . PASS END=109241834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:29,0 chr1 109241835 . T . PASS END=109241840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1141:0,90,255:31,0 chr1 109241841 . T . PASS END=109241842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr1 109241843 . A . PASS END=109241861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,85,255:31,0 chr1 109241862 . G . PASS END=109241863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 109241864 . C . PASS END=109241868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr1 109241869 . A . PASS END=109241869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,895:0,70,255:26,0 chr1 109241870 . G . PASS END=109241870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,891:0,56,255:26,0 chr1 109241871 . T . PASS END=109241874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,927:0,81,255:27,0 chr1 109241875 . G . PASS END=109241875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,787:0,48,255:25,0 chr1 109241876 . A . PASS END=109241878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,844:0,80,255:27,0 chr1 109241879 . G . PASS END=109241880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,656:0,63,255:23,0 chr1 109241881 . G . PASS END=109241882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109241883 . A . PASS END=109241883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr1 109241884 . T . PASS END=109241888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109241889 . A . PASS END=109241890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:28:0,63,889:0,63,255:27,0 chr1 109241891 . G . PASS END=109241896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,996:0,87,255:30,0 chr1 109241897 . A . PASS END=109241897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 109241898 . A . PASS END=109241902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr1 109241903 . G . PASS END=109241903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1026:0,79,255:30,0 chr1 109241904 . C . PASS END=109241918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:34:0,93,1246:0,97,255:37,0 chr1 109241919 . T . PASS END=109241919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:35,0 chr1 109241920 . G . PASS END=109242642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:37:0,84,1207:0,84,255:40,1 chr1 109255556 . A . PASS END=109255618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,102,1539:0,102,255:40,0 chr1 109256133 . G . PASS END=109256151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,201,255:40,0 chr1 109260399 . C . PASS END=109260408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:17,0 chr1 109260409 . A . PASS END=109260409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:16,0 chr1 109260410 . C . PASS END=109260413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,623:0,51,255:18,0 chr1 109260414 . C . PASS END=109260424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr1 109260425 . G . PASS END=109260425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 109260426 . C . PASS END=109260428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 109260429 . A . PASS END=109260429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 109260430 . T . PASS END=109260433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 109260434 . A . PASS END=109260434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 109260435 . A . PASS END=109260435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,763:0,36,255:23,0 chr1 109260436 . A . PASS END=109260444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 109260445 . C . PASS END=109260459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1201:0,84,255:34,0 chr1 109260460 . A . PASS END=109260460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:32,0 chr1 109260461 . T . PASS END=109260541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1132:0,83,255:40,0 chr1 109260542 . T . PASS END=109260542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 109260543 . C . PASS END=109260546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109260547 . A . PASS END=109260547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 109260548 . G . PASS END=109260549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109260550 . C . PASS END=109260550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109260551 . A . PASS END=109260551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:25,0 chr1 109260552 . C . PASS END=109260570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,884:0,61,255:25,0 chr1 109260571 . T . PASS END=109260571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 109260572 . G . PASS END=109260572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 109260573 . C . PASS END=109260599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:20,0 chr1 109260600 . C . PASS END=109260600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:15,0 chr1 109260601 . C . PASS END=109260650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,566:0,40,255:16,0 chr1 109260651 . C . PASS END=109260651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 109260652 . A . PASS END=109260652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109260653 . G . PASS END=109260653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 109261411 . T . PASS END=109261453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,535:0,41,255:19,0 chr1 109261454 . C . PASS END=109261457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 109261458 . A . PASS END=109261458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109261459 . T . PASS END=109261480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:26,0 chr1 109261481 . A . PASS END=109261482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109261483 . A . PASS END=109261483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:26,0 chr1 109261484 . T . PASS END=109261484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109261485 . A . PASS END=109261485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 109261486 . T . PASS END=109261671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,970:0,81,255:40,0 chr1 109264957 . G . PASS END=109264973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,707:0,60,255:26,0 chr1 109264974 . A . PASS END=109264974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 109264975 . A . PASS END=109264975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr1 109264976 . C . PASS END=109264979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr1 109264980 . C . PASS END=109264980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 109264981 . A . PASS END=109264981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr1 109264982 . A . PASS END=109264982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,964:0,60,255:29,0 chr1 109264983 . G . PASS END=109264991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1111:0,86,255:34,0 chr1 109264992 . G . PASS END=109264994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1317:0,105,255:36,0 chr1 109264995 . A . PASS END=109264995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:34,0 chr1 109264996 . G . PASS END=109265028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,101,1300:0,101,255:38,0 chr1 109265029 . G T, 166.92 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,23,0:0,17,0:117:205,120,0,1522,120,1522:255,123,0:0,0:1.6692e+02,1.1692e+02,0.0000e+00,4.5000e+02,1.5169e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,17:0,0,26,14 chr1 109265030 . G . PASS END=109265066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1386:0,102,255:40,0 chr1 109265067 . A . PASS END=109265209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:30:0,84,1094:0,90,255:40,0 chr1 109265210 . A . PASS END=109265210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109265211 . A . PASS END=109265212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109265213 . T . PASS END=109265214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 109268372 . T . PASS END=109268375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,762:0,60,255:21,0 chr1 109268376 . T . PASS END=109268376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 109268377 . T . PASS END=109268387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,790:0,63,255:24,0 chr1 109268388 . A . PASS END=109268388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 109268389 . A . PASS END=109268408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,826:0,65,255:26,0 chr1 109268409 . T . PASS END=109268421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 109268422 . C . PASS END=109268422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 109268423 . T . PASS END=109268626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:30:0,81,1215:0,90,255:40,0 chr1 109270430 . C . PASS END=109270600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:33:0,99,1271:0,99,255:40,0 chr1 109270601 . G . PASS END=109270601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1480:0,74,255:34,0 chr1 109270602 . T . PASS END=109270622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1305:0,81,255:36,0 chr1 109270623 . A . PASS END=109270626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:66:35:0,66,1219:0,66,255:32,0 chr1 109270627 . T . PASS END=109270632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:31,0 chr1 109270633 . T . PASS END=109270633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr1 109270634 . T . PASS END=109270635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:31,0 chr1 109270636 . A . PASS END=109270636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr1 109270637 . A . PASS END=109270641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 109270642 . G . PASS END=109270642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 109270643 . T . PASS END=109270643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109270644 . C . PASS END=109270644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:26,0 chr1 109270645 . C . PASS END=109270647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109270648 . G . PASS END=109270670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,69,255:26,0 chr1 109270671 . C . PASS END=109270671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 109270672 . C . PASS END=109270672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109270673 . A . PASS END=109270687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,715:0,49,255:19,0 chr1 109271254 . C . PASS END=109271472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1080:0,86,255:40,0 chr1 109271473 . G . PASS END=109271473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 109271474 . G . PASS END=109271478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109271479 . T . PASS END=109271487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 109271488 . A . PASS END=109271508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 109273296 . T . PASS END=109273544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:32:0,90,1350:0,96,255:40,0 chr1 109273545 . T . PASS END=109273545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 109273546 . C . PASS END=109273550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109275894 . G . PASS END=109275902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 109275903 . G . PASS END=109275916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 109275917 . A . PASS END=109275917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:15,0 chr1 109275918 . A . PASS END=109275921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:19,0 chr1 109275922 . A . PASS END=109275950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,723:0,62,255:26,0 chr1 109275951 . T . PASS END=109275951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,712:0,58,255:23,0 chr1 109275952 . C . PASS END=109275953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 109275954 . A . PASS END=109275954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 109275955 . C . PASS END=109275961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 109275962 . G . PASS END=109275963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr1 109275964 . C . PASS END=109275964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 109275965 . T . PASS END=109275965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:31,0 chr1 109275966 . C . PASS END=109275966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 109275967 . C . PASS END=109276141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1141:0,80,255:40,0 chr1 109276142 . A . PASS END=109276154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 109280117 . T . PASS END=109280146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,172,255:40,0 chr1 109284395 . T . PASS END=109284426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,198,255:40,0 chr1 109289360 . A . PASS END=109289380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:32,0 chr1 109289381 . A . PASS END=109289381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,985:0,76,255:28,0 chr1 109289382 . G . PASS END=109289392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 109289393 . A . PASS END=109289393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,976:0,57,255:25,0 chr1 109289394 . G . PASS END=109289394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109289395 . C . PASS END=109289395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:26,0 chr1 109289396 . G . PASS END=109289396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109289397 . T . PASS END=109289408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,816:0,61,255:25,0 chr1 109294879 . A . PASS END=109294928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:88:0,120,1800:0,250,255:40,0 chr1 109295685 . A . PASS END=109295766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,155,255:40,0 chr1 109299312 . T . PASS END=109299388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,176,255:40,0 chr1 109301132 . T . PASS END=109301210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:67:0,120,1800:0,173,255:40,0 chr1 109302607 . T . PASS END=109302707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:61:0,120,1800:0,159,255:40,0 chr1 109315287 . G . PASS END=109315288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 109315289 . G . PASS END=109315289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:40,0 chr1 109315290 . T . PASS END=109315441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:90:41:0,90,1476:0,90,255:40,0 chr1 109318955 . T . PASS END=109318967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,110,1543:0,110,255:40,2 chr1 109318968 . A . PASS END=109318968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:75:59:0,75,1984:0,75,255:40,2 chr1 109318969 . A . PASS END=109319045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:57:0,120,1800:0,125,255:40,0 chr1 109321908 . G . PASS END=109322032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:55:0,120,1800:0,158,255:40,0 chr1 109325044 . A . PASS END=109325139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,114,1800:0,114,255:40,0 chr1 109325271 . G . PASS END=109325328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,3:105:99:99:0,103,1800:0,103,255:40,0 chr1 109336204 . A . PASS END=109336269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:71:0,120,1800:0,213,255:40,2 chr1 109337449 . C . PASS END=109337529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,108,1620:0,143,255:40,0 chr1 109338856 . G . PASS END=109338962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,120,1800:0,120,255:40,0 chr1 109338963 . A . PASS END=109338963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1540:0,75,255:40,0 chr1 109338964 . G . PASS END=109338994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:41:0,80,1395:0,80,255:40,0 chr1 109339242 . G . PASS END=109339348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:55:0,120,1800:0,124,255:40,1 chr1 109340767 . T . PASS END=109340859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:97:39:0,97,1485:0,97,255:40,0 chr1 109342842 . G . PASS END=109342927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:46:0,120,1800:0,122,255:40,0 chr1 109350023 . T . PASS END=109350047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,126,255:40,0 chr1 109350048 . T . PASS END=109350148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,130,255:40,0 chr1 109350149 . T . PASS END=109350171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,108,1613:0,108,255:40,1 chr1 109351405 . G . PASS END=109351463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,160,255:40,0 chr1 109351464 . C . PASS END=109351499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,111,1665:0,114,255:40,0 chr1 109358793 . C . PASS END=109358793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 109358794 . T . PASS END=109358794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:33,0 chr1 109358795 . A . PASS END=109358924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:94:37:0,94,1282:0,94,255:40,0 chr1 109359670 . C . PASS END=109359799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1288:0,92,255:40,0 chr1 109363167 . T . PASS END=109363177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:66:0,120,1800:0,177,255:40,0 chr1 109363178 . G . PASS END=109363194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,218,255:40,0 chr1 109363195 . T . PASS END=109363231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,194,255:40,0 chr1 109363232 . T C, 248.64 PASS DP=67;MQ=249.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,38,0:0,29,0:199:286,202,0,2571,202,2571:255,202,0:0,0:2.4864e+02,1.9864e+02,0.0000e+00,4.5000e+02,2.3341e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,36:0,0,34,33 chr1 109363233 . T . PASS END=109363248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:59:0,120,1800:0,125,255:40,1 chr1 109365775 . T . PASS END=109365775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 109365776 . C . PASS END=109365804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,917:0,62,255:26,0 chr1 109365805 . C . PASS END=109365805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 109365806 . T . PASS END=109365808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109365809 . G . PASS END=109365821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1139:0,90,255:30,0 chr1 109365822 . C . PASS END=109365825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109365826 . T . PASS END=109365826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109365827 . G . PASS END=109365829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 109365830 . G . PASS END=109365850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1156:0,83,255:31,0 chr1 109365851 . G . PASS END=109365851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 109365852 . G . PASS END=109365871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:30,0 chr1 109365872 . C . PASS END=109365885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 109365886 . G . PASS END=109365893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 109365992 . A . PASS END=109366099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:41:0,102,1590:0,102,255:40,0 chr1 109366188 . C . PASS END=109366310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:35:0,90,1378:0,90,255:40,0 chr1 109369827 . T . PASS END=109369834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1119:0,82,255:33,0 chr1 109369835 . G . PASS END=109369856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:33:0,92,1205:0,92,255:36,0 chr1 109369857 . C . PASS END=109369857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1223:0,75,255:31,0 chr1 109369858 . A . PASS END=109369875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1201:0,89,255:33,0 chr1 109369876 . T . PASS END=109369876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:31,0 chr1 109369877 . C . PASS END=109369877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr1 109369878 . T . PASS END=109369898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:33,0 chr1 109369899 . G . PASS END=109369911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:27:0,70,905:0,70,255:26,0 chr1 109369912 . C . PASS END=109369914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109369915 . G T, 49.27 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=2.124;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,14,0:0.452,0.000:31:8,8,0:9,6,0:48:84,0,50,456,590,1045:255,0,255:16,0:4.9274e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,4,10:8,9,6,8 chr1 109369916 . T . PASS END=109369924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 109373181 . C . PASS END=109373182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 109373183 . T . PASS END=109373198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:23,0 chr1 109373199 . C . PASS END=109373199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 109373200 . A . PASS END=109373201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 109373202 . A . PASS END=109373202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 109373203 . A . PASS END=109373229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,861:0,69,255:25,0 chr1 109373230 . T . PASS END=109373261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,955:0,84,255:30,0 chr1 109373262 . T . PASS END=109373272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,942:0,70,255:26,0 chr1 109377069 . C . PASS END=109377111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:39:0,80,1463:0,80,255:40,0 chr1 109377112 . T . PASS END=109377112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:41:0,81,1215:0,123,255:27,0 chr1 109377113 . T . PASS END=109377121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:60:37:0,60,900:0,98,255:23,0 chr1 109377122 . C . PASS END=109377126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:42:34:0,42,630:0,69,255:19,0 chr1 109377127 . T . PASS END=109377132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:30:34:0,30,450:0,68,255:12,0 chr1 109377133 . T . PASS END=109377137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:21:32:0,21,315:0,82,255:9,0 chr1 109377138 . A . PASS END=109377140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:12:33:0,12,180:0,82,255:6,0 chr1 109377141 . G . PASS END=109377150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:6:31:0,6,90:0,63,255:3,0 chr1 109377551 . G . PASS END=109377579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr1 109377580 . G . PASS END=109377589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 109377590 . T . PASS END=109377590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 109377591 . C . PASS END=109377615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:19,0 chr1 109377616 . T . PASS END=109377657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:24,0 chr1 109377658 . G . PASS END=109377665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109377666 . G . PASS END=109377666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 109377667 . C . PASS END=109377678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,714:0,57,255:19,0 chr1 109380172 . C . PASS END=109380174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr1 109380175 . A . PASS END=109380175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 109380176 . T . PASS END=109380184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1131:0,90,255:30,0 chr1 109380185 . G . PASS END=109380185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 109380186 . A . PASS END=109380191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:32,0 chr1 109380192 . A . PASS END=109380192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:31,0 chr1 109380193 . G . PASS END=109380328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:80:32:0,80,1163:0,80,255:40,0 chr1 109385756 . C . PASS END=109385889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,108,1620:0,117,255:40,0 chr1 109385904 . T . PASS END=109385904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 109391374 . C . PASS END=109391436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:57:0,120,1800:0,128,255:40,0 chr1 109391534 . T . PASS END=109391682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,136,255:40,0 chr1 109392159 . C . PASS END=109392198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:90:0,120,1800:0,232,255:40,0 chr1 109394294 . C . PASS END=109395067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:39:0,96,1442:0,96,255:40,0 chr1 109395068 . C . PASS END=109395104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,124,255:40,0 chr1 109395105 . C T, 223.18 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,32,0:0,27,0:173:261,176,0,2184,176,2184:255,180,0:0,0:2.2318e+02,1.7318e+02,0.0000e+00,4.5000e+02,2.0795e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,24:0,0,34,25 chr1 109395106 . T . PASS END=109395142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,129,255:40,0 chr1 109395143 . A . PASS END=109395286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,102,1530:0,115,255:40,0 chr1 109419613 . G . PASS END=109419613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 109419630 . C . PASS END=109419630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 109419646 . C . PASS END=109419646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 109419658 . G . PASS END=109419658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr1 109419673 . G . PASS END=109419673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1327:0,108,255:36,0 chr1 109419702 . C . PASS END=109419702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1257:0,89,255:33,0 chr1 109419730 . G . PASS END=109419730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 109419742 . C . PASS END=109419742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 109419783 . C . PASS END=109419783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 109419793 . C . PASS END=109419793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109419811 . C . PASS END=109419811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 109427896 . G . PASS END=109427896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 109427900 . T . PASS END=109427900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 109428143 . C . PASS END=109428143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr1 109428145 . A . PASS END=109428200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:98:0,120,1800:0,255,255:40,0 chr1 109439476 . A . PASS END=109439476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 109439486 . A . PASS END=109439688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:35:0,87,1305:0,90,255:40,0 chr1 109439689 . A . PASS END=109439700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:24:0,63,945:0,72,255:24,0 chr1 109439701 . T . PASS END=109439701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 109439702 . T . PASS END=109439708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 109440108 . T . PASS END=109440108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1365:0,108,255:36,0 chr1 109440114 . G . PASS END=109440249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:40:0,102,1482:0,120,255:40,0 chr1 109440581 . G . PASS END=109440582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 109440583 . G . PASS END=109440583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 109440584 . G . PASS END=109440723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:28:0,84,977:0,84,255:40,0 chr1 109441264 . G . PASS END=109441268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:23,0 chr1 109441269 . A . PASS END=109441269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr1 109441270 . C . PASS END=109441270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 109441271 . C . PASS END=109441271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109441272 . T . PASS END=109441276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109441277 . T . PASS END=109441277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 109441278 . T . PASS END=109441371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1055:0,84,255:40,0 chr1 109441372 . T . PASS END=109441372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1520:0,77,255:36,0 chr1 109441373 . A . PASS END=109441387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,99,1444:0,99,255:40,0 chr1 109441501 . C . PASS END=109441616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:57:0,120,1800:0,155,255:40,2 chr1 109444412 . G . PASS END=109444567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:36:0,90,1350:0,99,255:40,0 chr1 109444579 . G . PASS END=109444579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 109445748 . A . PASS END=109445857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:52:0,120,1800:0,127,255:40,0 chr1 109446746 . G . PASS END=109446876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1215:0,90,255:40,0 chr1 109456960 . G . PASS END=109457030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:37:0,85,1347:0,85,255:40,0 chr1 109457041 . G . PASS END=109457041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,120,255:31,0 chr1 109460998 . G . PASS END=109461111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:63:0,120,1800:0,156,255:40,0 chr1 109461235 . G . PASS END=109461413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:35:0,81,1215:0,95,255:40,0 chr1 109461414 . A . PASS END=109461414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,88,255:26,0 chr1 109461415 . C . PASS END=109461419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:27,0 chr1 109461420 . A . PASS END=109461422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1080:0,77,255:25,0 chr1 109461423 . C . PASS END=109461423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:23,0 chr1 109461424 . T . PASS END=109461426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,70,255:23,0 chr1 109465039 . A . PASS END=109465198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:41:0,93,1395:0,107,255:40,0 chr1 109466622 . C . PASS END=109466641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1070:0,80,255:40,0 chr1 109466642 . T . PASS END=109466642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1390:0,54,255:38,0 chr1 109466643 . C . PASS END=109466905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:42:0,111,1690:0,111,255:40,0 chr1 109468897 . G . PASS END=109468926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:62:0,119,1800:0,119,255:40,0 chr1 109472313 . A . PASS END=109472313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 109472323 . G . PASS END=109472562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:39:0,101,1412:0,101,255:40,0 chr1 109472569 . T . PASS END=109472569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 109472770 . A . PASS END=109472770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 109472884 . T . PASS END=109472884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 109472913 . C . PASS END=109472913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 109473029 . G . PASS END=109473030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:73:0,120,1800:0,131,255:40,4 chr1 109473036 . T . PASS END=109473036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr1 109473978 . C . PASS END=109473993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:27,0 chr1 109473994 . A . PASS END=109474096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:28:0,80,1158:0,80,255:40,0 chr1 109474097 . A . PASS END=109474104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,74,255:23,0 chr1 109474105 . C . PASS END=109474107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 109477292 . C . PASS END=109477306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 109477307 . G . PASS END=109477318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr1 109477319 . C . PASS END=109477336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:24,0 chr1 109477337 . C . PASS END=109477337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 109477338 . A . PASS END=109477349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,882:0,61,255:26,0 chr1 109477350 . G . PASS END=109477370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1147:0,80,255:31,0 chr1 109477371 . T . PASS END=109477371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1123:0,58,255:30,0 chr1 109477372 . C . PASS END=109477445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:31:0,86,1170:0,86,255:37,0 chr1 109477446 . T . PASS END=109477446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:29,0 chr1 109477447 . C . PASS END=109477451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:30,0 chr1 109477452 . C . PASS END=109477506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 109477507 . C . PASS END=109477507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 109477508 . T . PASS END=109477508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:21,0 chr1 109477509 . T . PASS END=109477514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 109477515 . A . PASS END=109477515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 109477516 . G . PASS END=109477518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109477519 . T . PASS END=109477551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 109477552 . C . PASS END=109477552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 109477553 . A . PASS END=109477564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,485:0,48,255:16,0 chr1 109479699 . A . PASS END=109479701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 109479702 . G . PASS END=109479727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,778:0,63,255:25,0 chr1 109479728 . C . PASS END=109479800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,958:0,81,255:40,0 chr1 109479801 . A . PASS END=109479801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:29:42:0,29,1150:0,29,255:36,2 chr1 109479802 . T . PASS END=109479803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:56:42:0,56,1346:0,56,255:40,2 chr1 109479804 . T . PASS END=109479819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1247:0,84,255:40,0 chr1 109479820 . T . PASS END=109479820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1364:0,76,255:39,0 chr1 109479821 . C . PASS END=109479834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:42:0,93,1447:0,93,255:40,0 chr1 109479835 . T . PASS END=109479835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1422:0,74,255:40,0 chr1 109479836 . A . PASS END=109479936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:39:0,99,1496:0,99,255:40,0 chr1 109479937 . T . PASS END=109479937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:34,0 chr1 109479938 . G . PASS END=109479977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,92,255:35,0 chr1 109479978 . G . PASS END=109479978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 109479979 . C . PASS END=109479986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 109479987 . A . PASS END=109479987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109479988 . C . PASS END=109480019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,659:0,51,255:19,0 chr1 109480020 . T . PASS END=109480020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 109480021 . C . PASS END=109480024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 109480025 . C . PASS END=109480039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,495:0,31,255:13,0 chr1 109480040 . T . PASS END=109480040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 109480788 . C . PASS END=109480838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,111,1543:0,112,255:40,0 chr1 109482255 . A . PASS END=109482255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 109482258 . C . PASS END=109482266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,129,255:40,0 chr1 109482267 . T . PASS END=109482303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,113,1672:0,113,255:40,0 chr1 109482304 . G A, 49.42 PASS DP=61;MQ=250.00;MQRankSum=6.679;ReadPosRankSum=4.103;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,28,0:0.459,0.000:61:15,17,0:18,11,0:48:84,0,50,985,1180,2166:255,0,255:33,0:4.9421e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,15,14,14:18,15,13,15 chr1 109482305 . C . PASS END=109482341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:61:0,120,1800:0,183,255:40,0 chr1 109482342 . A . PASS END=109482404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:37:0,90,1350:0,111,255:40,0 chr1 109482667 . C . PASS END=109482753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1125:0,80,255:40,0 chr1 109482754 . T . PASS END=109482754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:27,0 chr1 109482755 . C . PASS END=109482764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 109484027 . C . PASS END=109484120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,122,255:40,0 chr1 109486097 . C . PASS END=109486158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,106,1713:0,106,255:40,0 chr1 109486159 . T . PASS END=109486195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:59:0,120,1800:0,167,255:40,0 chr1 109486196 . A G, 48.33 PASS DP=58;MQ=249.73;MQRankSum=5.897;ReadPosRankSum=0.924;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,24,0:0.414,0.000:58:20,13,0:14,11,0:46:83,0,47,183,183,183:255,0,255:30,0:4.8330e+01,1.0717e-04,5.0000e+01,1.8310e+02,2.1787e+02,1.8611e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,17,11,13:15,19,10,14 chr1 109486197 . G . PASS END=109486230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:49:0,96,1440:0,137,255:40,0 chr1 109486231 . G . PASS END=109486238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:69:47:0,69,1035:0,97,255:26,0 chr1 109486458 . C . PASS END=109486679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:92:33:0,92,1324:0,92,255:40,0 chr1 109489960 . C . PASS END=109489961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109489962 . C . PASS END=109489978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 109489979 . A . PASS END=109489979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:22,0 chr1 109489980 . G . PASS END=109489982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 109489983 . C . PASS END=109489983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 109489984 . A . PASS END=109489995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:26,0 chr1 109489996 . A . PASS END=109490000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 109490001 . A . PASS END=109490001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 109490002 . A . PASS END=109490007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 109490116 . T . PASS END=109490130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,137,255:40,0 chr1 109490233 . A . PASS END=109490340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:69:0,120,1800:0,172,255:40,0 chr1 109492442 . C . PASS END=109492543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:65:0,120,1800:0,143,255:40,0 chr1 109492931 . C . PASS END=109493059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,102,1512:0,105,255:40,0 chr1 109505983 . G . PASS END=109505983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 109505984 . T . PASS END=109506001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:31,0 chr1 109506002 . C . PASS END=109506002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 109506003 . C . PASS END=109506044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1157:0,93,255:36,0 chr1 109506045 . C . PASS END=109506045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 109506046 . G . PASS END=109506076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:33,0 chr1 109506077 . T . PASS END=109506096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,868:0,69,255:25,0 chr1 109514052 . C . PASS END=109514169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:36:0,88,1293:0,88,255:40,0 chr1 109514170 . A . PASS END=109514170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1321:0,65,255:33,0 chr1 109514171 . T . PASS END=109514176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:37:0,89,1354:0,89,255:35,0 chr1 109514177 . G . PASS END=109514177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:32,0 chr1 109514178 . C . PASS END=109514194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,86,255:34,0 chr1 109517158 . C . PASS END=109517158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109517159 . T . PASS END=109517162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 109517163 . A . PASS END=109517163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 109517164 . G . PASS END=109517167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 109517168 . T . PASS END=109517168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 109517169 . G . PASS END=109517172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 109517173 . C . PASS END=109517173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 109517174 . C . PASS END=109517185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr1 109517186 . A . PASS END=109517186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 109517187 . T . PASS END=109517193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:25,0 chr1 109517194 . A . PASS END=109517194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 109517195 . G . PASS END=109517195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 109517196 . C . PASS END=109517197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 109517198 . T . PASS END=109517203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:26,0 chr1 109517204 . C . PASS END=109517214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 109517215 . C . PASS END=109517215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 109517216 . T . PASS END=109517245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:30:0,82,1252:0,82,255:37,0 chr1 109517246 . A . PASS END=109517246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr1 109517247 . C . PASS END=109517335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:37:0,95,1344:0,95,255:40,0 chr1 109517336 . A . PASS END=109517336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1277:0,67,255:35,0 chr1 109517337 . C . PASS END=109517348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1357:0,95,255:37,0 chr1 109517349 . T . PASS END=109517349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:33,0 chr1 109517350 . C . PASS END=109517366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1215:0,95,255:35,0 chr1 109517367 . A . PASS END=109517372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1035:0,108,255:24,0 chr1 109517373 . C . PASS END=109517376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:45:29:0,45,675:0,67,255:18,0 chr1 109524355 . C . PASS END=109524486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,101,1450:0,101,255:40,0 chr1 109525231 . C . PASS END=109525376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:85:40:0,85,1419:0,85,255:40,0 chr1 109525377 . T . PASS END=109525407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,171,255:40,0 chr1 109525904 . C . PASS END=109526059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:36:0,84,1260:0,92,255:40,0 chr1 109526060 . G . PASS END=109526073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:26:0,65,929:0,65,255:26,0 chr1 109529145 . C . PASS END=109529279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:90:44:0,90,1350:0,121,255:40,0 chr1 109529280 . A . PASS END=109529283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:43:0,81,1215:0,112,255:30,0 chr1 109529284 . G . PASS END=109529284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:78:43:0,78,1170:0,112,255:25,0 chr1 109529285 . C . PASS END=109529286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:43:0,81,1215:0,129,255:27,0 chr1 109529287 . T . PASS END=109529294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:63:39:0,63,945:0,107,255:26,0 chr1 109529295 . T . PASS END=109529298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:48:39:0,48,720:0,117,255:19,0 chr1 109529299 . C . PASS END=109529302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:36:40:0,36,540:0,120,255:12,0 chr1 109533876 . C . PASS END=109533951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,105,1575:0,110,255:40,0 chr1 109538202 . A . PASS END=109538459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:90:34:0,90,1350:0,90,255:40,0 chr1 109544846 . C . PASS END=109544858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:26,0 chr1 109544859 . G . PASS END=109544862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 109544863 . A . PASS END=109544863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 109544864 . G . PASS END=109544868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:31,0 chr1 109544869 . A . PASS END=109544869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 109544870 . T . PASS END=109545008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:31:0,93,1119:0,93,255:40,0 chr1 109545009 . C . PASS END=109545024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1260:0,92,255:37,0 chr1 109547214 . C . PASS END=109547216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 109547217 . A . PASS END=109547217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,1 chr1 109547218 . T . PASS END=109547218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:51:34:0,51,1121:0,51,255:31,1 chr1 109547219 . T . PASS END=109547219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:33,0 chr1 109547220 . T . PASS END=109547225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 109547226 . T . PASS END=109547226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:32,0 chr1 109547227 . T . PASS END=109547316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1215:0,91,255:40,0 chr1 109547317 . T . PASS END=109547323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:34:0,78,1170:0,101,255:26,0 chr1 109547324 . C . PASS END=109547327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109547328 . A . PASS END=109547339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,64,255:22,0 chr1 109547340 . T . PASS END=109547340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 109553538 . C . PASS END=109553543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 109553544 . G . PASS END=109553554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:30,0 chr1 109553555 . G . PASS END=109553555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 109553556 . T . PASS END=109553625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1109:0,90,255:36,0 chr1 109553626 . A . PASS END=109553631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 109553632 . C . PASS END=109553632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 109553633 . A . PASS END=109553651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 109553652 . G . PASS END=109553667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,936:0,81,255:29,0 chr1 109553668 . G . PASS END=109553677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 109553678 . T . PASS END=109553678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,942:0,56,255:24,0 chr1 109553679 . C . PASS END=109553683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1056:0,76,255:26,0 chr1 109553684 . A . PASS END=109553685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109553686 . C . PASS END=109553687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1061:0,60,255:26,0 chr1 109553688 . T . PASS END=109553689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109553690 . A . PASS END=109553697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,76,255:25,0 chr1 109553698 . G . PASS END=109554314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:34:0,87,1330:0,87,255:40,0 chr1 109554315 . A . PASS END=109554322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:34:0,78,1170:0,80,255:26,0 chr1 109554323 . T . PASS END=109554325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:27,0 chr1 109554326 . C . PASS END=109554333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 109554334 . A . PASS END=109554334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,799:0,48,255:22,0 chr1 109554335 . T . PASS END=109554338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:24,0 chr1 109554339 . A . PASS END=109554339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,841:0,39,255:22,0 chr1 109554340 . G . PASS END=109554340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:22,0 chr1 109556442 . C . PASS END=109556539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:42:0,96,1440:0,110,255:40,0 chr1 109556540 . A . PASS END=109556540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:32,0 chr1 109556541 . A . PASS END=109556547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:34:0,93,1395:0,101,255:33,0 chr1 109560140 . C . PASS END=109560223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,104,1465:0,104,255:40,0 chr1 109565977 . C . PASS END=109566131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:37:0,81,1215:0,92,255:40,0 chr1 109566132 . C . PASS END=109566134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:40:0,75,1125:0,120,255:26,0 chr1 109607145 . T . PASS END=109607303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1067:0,85,255:40,0 chr1 109607304 . T . PASS END=109607315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,84,255:25,0 chr1 109608757 . C . PASS END=109608854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:52:0,120,1800:0,123,255:40,0 chr1 109617609 . A . PASS END=109617687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,148,255:40,0 chr1 109618543 . C . PASS END=109618569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,105,1668:0,105,255:40,0 chr1 109633495 . A . PASS END=109633495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 109633496 . T . PASS END=109633496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 109633497 . G . PASS END=109633504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 109635512 . T . PASS END=109635704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:96:43:0,96,1440:0,113,255:40,0 chr1 109637039 . C . PASS END=109637201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:90:45:0,90,1350:0,127,255:40,0 chr1 109648650 . C . PASS END=109648651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 109648652 . A . PASS END=109648662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:30,0 chr1 109648663 . A . PASS END=109648663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:30,0 chr1 109648664 . A . PASS END=109648694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 109648695 . A . PASS END=109648695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 109648696 . T . PASS END=109648697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 109648698 . G . PASS END=109648720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 109649157 . C . PASS END=109649188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:30,0 chr1 109649189 . T . PASS END=109649189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 109649190 . T . PASS END=109649194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 109649195 . G . PASS END=109649195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 109649196 . G . PASS END=109649235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:34,0 chr1 109649236 . T . PASS END=109649236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:28,0 chr1 109649237 . G . PASS END=109649250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr1 109649251 . T . PASS END=109649261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,877:0,64,255:26,0 chr1 109649262 . C . PASS END=109649262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:24,0 chr1 109649263 . A . PASS END=109649278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 109649279 . G . PASS END=109649279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 109649280 . T . PASS END=109649281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 109649629 . C . PASS END=109649744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,99,1485:0,151,255:40,0 chr1 109650543 . C . PASS END=109650689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:50:0,112,1723:0,112,255:40,0 chr1 109655221 . C . PASS END=109655222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 109655223 . T . PASS END=109655263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr1 109655264 . A . PASS END=109655271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 109655272 . C . PASS END=109655272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 109655273 . T . PASS END=109655344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,709:0,63,255:23,0 chr1 109655345 . A . PASS END=109655345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 109655346 . G . PASS END=109655349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:21,0 chr1 109655350 . C . PASS END=109655351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,828:0,53,255:19,0 chr1 109655352 . G . PASS END=109655354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 109655355 . C . PASS END=109655356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 109655357 . G . PASS END=109655362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 109655363 . C . PASS END=109655368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 109655369 . T . PASS END=109655372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 109655373 . A . PASS END=109655373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,701:0,24,255:21,0 chr1 109655374 . T . PASS END=109655380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 109655381 . T . PASS END=109655381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 109655382 . C . PASS END=109655414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 109655415 . G . PASS END=109655419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 109655420 . C . PASS END=109655426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:20,0 chr1 109655427 . G . PASS END=109655434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 109655435 . T . PASS END=109655440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 109655441 . A . PASS END=109655448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 109655449 . C . PASS END=109655450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109655451 . T . PASS END=109655453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 109655454 . G . PASS END=109655475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr1 109655476 . T . PASS END=109655476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 109655477 . G . PASS END=109655485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 109655486 . A . PASS END=109655497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:17,0 chr1 109655498 . A . PASS END=109655508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr1 109655509 . G . PASS END=109655518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:20:0,30,450:0,60,255:11,0 chr1 109655519 . A . PASS END=109655539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:17:0,24,360:0,37,255:9,0 chr1 109655540 . G GC, 49.87 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=0.337;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:2,5,0:7,3,0:48:79,0,50,250,284,535:251,0,255:9,13:4.9875e+01,6.6527e-05,5.3000e+01,2.5612e+02,3.1907e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:5,4,4,4:4,5,5,3 chr1 109655541 . C . LowGQ END=109655541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,8:17:0:17:0,0,47:251,0,255:17,0 chr1 109655542 . C . PASS END=109655570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,548:0,51,255:17,0 chr1 109655571 . C . PASS END=109655583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:12:0,31,468:0,31,255:12,0 chr1 109655584 . C . PASS END=109655590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 109655591 . C . PASS END=109655592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 109655593 . C . PASS END=109655598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 109656255 . T . PASS END=109656289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,947:0,75,255:25,0 chr1 109656290 . A . PASS END=109656290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,715:0,42,255:21,0 chr1 109656291 . T . PASS END=109656295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 109656296 . C . PASS END=109656299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 109656806 . A . PASS END=109656807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 109656808 . G . PASS END=109656813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:13,0 chr1 109656814 . G . PASS END=109656814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 109656815 . C . PASS END=109656817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 109656818 . G . PASS END=109656827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 109656828 . A . PASS END=109656828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 109656829 . C . PASS END=109656847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:18,0 chr1 109656848 . A . PASS END=109656848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 109656849 . G . PASS END=109656854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 109656855 . G . PASS END=109656878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,738:0,63,255:24,0 chr1 109656879 . T . PASS END=109656879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 109656880 . G . PASS END=109656880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 109656881 . T . PASS END=109656882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 109656883 . G . PASS END=109656887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 109656888 . T . PASS END=109656888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 109656889 . G . PASS END=109656908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,856:0,62,255:26,0 chr1 109656909 . C . PASS END=109656939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 109656940 . G . PASS END=109656945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 109656946 . T C, 48.25 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=1.813;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,8,0:0.400,0.000:20:6,4,0:6,4,0:47:83,0,50,286,429,715:250,0,255:12,0:4.8252e+01,8.6719e-05,5.3000e+01,2.8614e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,4,4:9,3,4,4 chr1 109656947 . G . PASS END=109656958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 109704516 . T . PASS END=109704518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 109704519 . G . PASS END=109704520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109704521 . G . PASS END=109704521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 109704522 . T . PASS END=109704580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1125:0,90,255:40,0 chr1 109704581 . G . PASS END=109704610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,82,255:40,0 chr1 109704611 . T . PASS END=109704611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:27,0 chr1 109704612 . G . PASS END=109704613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109704614 . C . PASS END=109704617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 109704618 . A G, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,14,0:0,14,0:81:169,84,0,1086,84,1086:255,84,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,16:0,0,18,10 chr1 109704619 . T . PASS END=109704636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 109707121 . C . PASS END=109707136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 109707137 . C . PASS END=109707147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 109707148 . T . PASS END=109707148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109707149 . G . PASS END=109707163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 109707164 . G . PASS END=109707165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 109707166 . C . PASS END=109707308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,95,255:40,0 chr1 109707309 . A . PASS END=109707313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 109714488 . G . PASS END=109714617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1271:0,89,255:40,0 chr1 109714618 . A . PASS END=109714618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:35,0 chr1 109714619 . T . PASS END=109714635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1072:0,97,255:38,0 chr1 109715110 . G . PASS END=109715190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:34:0,102,1251:0,102,255:40,0 chr1 109716096 . G . PASS END=109716099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1039:0,71,255:27,0 chr1 109716100 . A . PASS END=109716116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,997:0,84,255:30,0 chr1 109716117 . A . PASS END=109716117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 109716118 . A . PASS END=109716121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 109716122 . C . PASS END=109716122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1117:0,65,255:27,0 chr1 109716123 . C . PASS END=109716201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1249:0,82,255:40,0 chr1 109716310 . G . PASS END=109716456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,95,255:40,0 chr1 109716457 . C . PASS END=109716459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 109727667 . A . PASS END=109727699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1135:0,85,255:40,0 chr1 109727700 . C . PASS END=109727755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,104,1546:0,104,255:40,0 chr1 109730266 . A . PASS END=109730280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1211:0,88,255:35,0 chr1 109730281 . C . PASS END=109730281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 109730282 . T . PASS END=109730292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:35,0 chr1 109730799 . A . PASS END=109730805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:23,0 chr1 109730806 . T . PASS END=109730806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 109730807 . C . PASS END=109730845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,823:0,69,255:26,0 chr1 109730846 . C . PASS END=109730848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 109730849 . T . PASS END=109730849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 109730850 . G . PASS END=109730868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 109730869 . C . PASS END=109730871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:26,0 chr1 109730872 . C . PASS END=109730885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1202:0,83,255:29,0 chr1 109730886 . A . PASS END=109730886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 109730887 . C . PASS END=109730895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 109730896 . C . PASS END=109730896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr1 109730897 . A . PASS END=109730903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 109730904 . A . PASS END=109730904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 109730905 . A . PASS END=109730906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 109730907 . C . PASS END=109730944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,73,255:26,0 chr1 109730945 . C . PASS END=109730976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,645:0,41,255:19,0 chr1 109731688 . A . PASS END=109731692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1164:0,83,255:32,0 chr1 109731693 . A . PASS END=109731693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1097:0,60,255:32,0 chr1 109731694 . C . PASS END=109731698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1184:0,86,255:34,0 chr1 109731699 . T . PASS END=109731699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1155:0,55,255:31,0 chr1 109731700 . G . PASS END=109731703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1272:0,92,255:35,0 chr1 109731704 . T . PASS END=109731704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1205:0,77,255:33,0 chr1 109731705 . G . PASS END=109731709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:34,0 chr1 109731710 . G . PASS END=109731710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:34,0 chr1 109731711 . A . PASS END=109731775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:35:0,81,1244:0,81,255:40,0 chr1 109731776 . C . PASS END=109731791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:25:0,75,953:0,75,255:26,0 chr1 109731792 . A . PASS END=109731792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:23,0 chr1 109731793 . A . PASS END=109731816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,917:0,75,255:26,0 chr1 109732214 . G . PASS END=109732304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,99,1405:0,99,255:40,0 chr1 109733988 . A . PASS END=109734093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,102,1530:0,120,255:40,0 chr1 109734348 . G . PASS END=109734482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1126:0,85,255:40,0 chr1 109734483 . G . PASS END=109734485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 109735233 . A . PASS END=109735246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,987:0,84,255:35,0 chr1 109735247 . C . PASS END=109735247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:35,0 chr1 109735248 . A . PASS END=109735253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1233:0,89,255:35,0 chr1 109735254 . G . PASS END=109735254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr1 109735255 . T . PASS END=109735260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1138:0,91,255:36,0 chr1 109735261 . A . LowGQ END=109735261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,7:36:0:36:0,0,807:23,0,255:28,0 chr1 109735262 . G . PASS END=109735276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1252:0,83,255:37,0 chr1 109735277 . T . PASS END=109735277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 109735278 . G . PASS END=109735297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,105,1565:0,110,255:40,0 chr1 109735298 . T C, 45.03 PASS DP=42;MQ=250.00;MQRankSum=5.374;ReadPosRankSum=2.007;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,16,0:0.381,0.000:42:12,9,0:14,7,0:44:80,0,50,572,929,1501:255,0,255:25,0:4.5031e+01,1.5817e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,12,4:18,8,9,7 chr1 109735299 . G . PASS END=109735335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,114,1755:0,114,255:40,0 chr1 109735336 . C . PASS END=109735378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,112,1755:0,112,255:40,0 chr1 109735379 . T . PASS END=109735415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,110,1490:0,110,255:40,0 chr1 109735416 . A C, 49.50 PASS DP=39;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=4.719;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,18,0:0.462,0.000:39:11,10,0:10,8,0:48:84,0,50,636,751,1387:255,0,255:21,0:4.9495e+01,7.0410e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,15,5,13:8,13,11,7 chr1 109735417 . C . PASS END=109735449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1380:0,101,255:39,0 chr1 109735450 . G . PASS END=109735455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,86,255:24,0 chr1 109735456 . A . PASS END=109735462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:24:0,60,900:0,72,255:22,0 chr1 109735463 . T . PASS END=109735463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:19,0 chr1 109735464 . G . PASS END=109735464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 109735465 . T . PASS END=109735465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 109735466 . G . PASS END=109735482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 109735483 . C . PASS END=109735496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:10:0,30,388:0,30,255:10,0 chr1 109737043 . A . PASS END=109737048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 109737049 . T . PASS END=109737049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 109737050 . C . PASS END=109737050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 109737051 . T . PASS END=109737051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 109737052 . C . PASS END=109737060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,999:0,81,255:32,0 chr1 109737061 . A . PASS END=109737061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 109737062 . A . PASS END=109737062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 109737063 . C T, 49.94 PASS DP=36;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=2.591;FractionInformativeReads=0.972;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:7,6,0:11,11,0:48:85,0,50,600,632,1232:255,0,255:18,0:4.9936e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,14,3:6,12,5,12 chr1 109737064 . G . PASS END=109737089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1252:0,81,255:38,0 chr1 109737090 . G A, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=1.029;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:7,9,0:12,12,0:48:85,0,50,720,678,1398:255,0,255:15,0:5.0000e+01,6.6010e-05,5.2827e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,15,6:6,13,11,10 chr1 109737091 . A . PASS END=109737131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1273:0,95,255:40,0 chr1 109737132 . T C, 49.66 PASS DP=46;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=0.284;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:8,9,0:16,12,0:48:84,0,50,714,798,1513:255,0,255:23,0:4.9657e+01,6.8857e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,12,9:10,14,8,13 chr1 109737133 . G . PASS END=109737171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,111,1475:0,115,255:40,0 chr1 109737172 . C T, 44.51 PASS DP=41;MQ=250.00;MQRankSum=5.224;ReadPosRankSum=2.514;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,15,0:0.375,0.000:40:8,9,0:17,6,0:44:79,0,50,518,886,1404:255,0,255:23,0:4.4506e+01,1.7551e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,7,8:12,13,7,8 chr1 109737173 . T . PASS END=109737201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,84,255:37,0 chr1 109737202 . C . PASS END=109737209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 109737210 . A . PASS END=109737216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:24,0 chr1 109740096 . G . PASS END=109740244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:34:0,87,1294:0,92,255:40,0 chr1 109740245 . A . PASS END=109740252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 109740253 . T . PASS END=109740254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109740255 . A . PASS END=109740255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 109740256 . G . PASS END=109740260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 109740261 . G . PASS END=109740266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 109740267 . C . PASS END=109740276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,73,255:26,0 chr1 109740601 . G . PASS END=109740697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:40:0,84,1503:0,84,255:40,2 chr1 109741195 . G . PASS END=109741202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1243:0,102,255:36,0 chr1 109741203 . A . PASS END=109741296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:37:0,87,1374:0,87,255:40,0 chr1 109742476 . A . PASS END=109742484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 109742485 . G A, 48.46 PASS DP=33;MQ=250.00;MQRankSum=4.826;ReadPosRankSum=3.078;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,14,0:0.424,0.000:33:12,10,0:7,4,0:47:83,0,50,493,651,1143:255,0,255:17,0:4.8463e+01,8.3612e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,10,4:9,10,6,8 chr1 109742486 . G . PASS END=109742522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1231:0,89,255:35,0 chr1 109742523 . G . PASS END=109742571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:34,0 chr1 109742572 . T . PASS END=109742572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 109742573 . A . PASS END=109742581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:30,0 chr1 109742582 . A . PASS END=109742583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,93,255:26,0 chr1 109742584 . C . PASS END=109742588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 109742589 . T . PASS END=109742602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 109742681 . A . PASS END=109742859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:36:0,82,1229:0,82,255:40,0 chr1 109743357 . A . PASS END=109743522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:33:0,87,1187:0,87,255:40,0 chr1 109743941 . G . PASS END=109743976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:35:0,94,1218:0,94,255:37,0 chr1 109745535 . C . PASS END=109745580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,140,255:40,0 chr1 109745581 . T . PASS END=109745617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,115,1800:0,115,255:40,0 chr1 109745618 . T C, 49.41 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=2.866;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,22,0:0.458,0.000:48:11,12,0:15,10,0:48:84,0,50,787,930,1717:255,0,255:20,0:4.9413e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,8,14:10,16,14,8 chr1 109745619 . A . PASS END=109745634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:39:0,90,1350:0,104,255:39,0 chr1 109756615 . A . PASS END=109756620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,773:0,72,255:25,0 chr1 109756621 . C . PASS END=109756621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 109756622 . T . PASS END=109756633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:26,0 chr1 109756634 . T . PASS END=109756702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,970:0,81,255:39,0 chr1 109756703 . C . PASS END=109756703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:31,0 chr1 109756704 . G . PASS END=109756725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1135:0,82,255:32,0 chr1 109756726 . A . PASS END=109756750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 109766600 . G . PASS END=109766670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:52:0,120,1800:0,129,255:40,0 chr1 109770974 . A . PASS END=109771025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:30:0,82,1077:0,82,255:40,0 chr1 109771026 . T . PASS END=109771054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:37:0,93,1395:0,108,255:40,0 chr1 109772036 . A . PASS END=109772087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1044:0,82,255:37,0 chr1 109772088 . T . PASS END=109772088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:36,0 chr1 109772089 . C . PASS END=109772164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:35:0,84,1160:0,84,255:39,0 chr1 109772165 . C . PASS END=109772172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,99,255:22,0 chr1 109772173 . T . PASS END=109772187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 109772188 . C . PASS END=109772194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 109773500 . G . PASS END=109773501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,895:0,42,255:25,0 chr1 109773502 . T . PASS END=109773504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109773505 . G . PASS END=109773507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 109773508 . C . PASS END=109773508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 109773509 . A . PASS END=109773643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:93:31:0,93,1111:0,93,255:40,0 chr1 109774253 . G . PASS END=109774408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:36:0,96,1335:0,107,255:40,1 chr1 109777832 . G . PASS END=109777834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 109777835 . A . PASS END=109777835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 109777836 . T . PASS END=109777840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 109777841 . A . PASS END=109777841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 109777842 . A . PASS END=109777843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 109777844 . G . PASS END=109777844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 109777845 . G . PASS END=109777845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 109777846 . C . PASS END=109777846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 109777847 . A . PASS END=109777869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,886:0,75,255:26,0 chr1 109777870 . C . PASS END=109777875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr1 109777876 . T . PASS END=109777876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 109777877 . G . PASS END=109777879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 109777880 . A . PASS END=109777880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,991:0,71,255:27,0 chr1 109777881 . A . PASS END=109777882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 109777883 . T . PASS END=109777884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 109777885 . C . PASS END=109777918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1164:0,83,255:30,0 chr1 109777919 . C . PASS END=109777920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 109777921 . G . PASS END=109777926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 109777927 . G . PASS END=109777927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 109777928 . G . PASS END=109777930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 109777931 . G . PASS END=109777932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 109777933 . G . PASS END=109777942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 109777943 . C . PASS END=109777947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 109777948 . G . PASS END=109777951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109777952 . C . PASS END=109777952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 109777953 . T . PASS END=109777962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 109777963 . G . PASS END=109777963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109777964 . T . PASS END=109777964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:25,0 chr1 109777965 . A . PASS END=109777997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 109777998 . T . PASS END=109777998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 109777999 . G . PASS END=109777999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109778000 . G . PASS END=109778000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 109778001 . G . PASS END=109778009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 109778010 . G . PASS END=109778017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr1 109778018 . A . PASS END=109778018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:23,0 chr1 109778019 . C . PASS END=109778027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 109778028 . T . PASS END=109778028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:19,0 chr1 109778029 . C . PASS END=109778035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 109778036 . G . PASS END=109778045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 109778046 . T . PASS END=109778046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 109778047 . T . PASS END=109778050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 109778051 . A . PASS END=109778053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,37,255:13,0 chr1 109778599 . A . PASS END=109778600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 109778601 . T . PASS END=109778603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 109778604 . A . PASS END=109778604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 109778605 . C . PASS END=109778614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,695:0,60,255:24,0 chr1 109778615 . A . PASS END=109778622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 109778623 . C . PASS END=109778635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 109778636 . A . PASS END=109778636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 109778637 . G . PASS END=109778637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 109778638 . T . PASS END=109778638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 109778639 . C . PASS END=109778646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 109778647 . A . PASS END=109778647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr1 109778648 . T . PASS END=109778654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,993:0,87,255:31,0 chr1 109778655 . A . PASS END=109778655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 109778656 . G . PASS END=109778698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1125:0,88,255:36,0 chr1 109778699 . T . PASS END=109778708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,83,255:26,0 chr1 109778709 . C . PASS END=109778725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1080:0,90,255:30,0 chr1 109778726 . C . PASS END=109778728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 109779013 . G . PASS END=109779015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 109779016 . C . PASS END=109779016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 109779017 . T . PASS END=109779018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109779019 . T . PASS END=109779019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 109779020 . G . PASS END=109779034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,878:0,61,255:26,0 chr1 109779035 . T . PASS END=109779035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 109779036 . A . PASS END=109779038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 109779039 . A . PASS END=109779041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,910:0,81,255:29,0 chr1 109779042 . C . PASS END=109779043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 109779044 . T . PASS END=109779170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:29:0,87,1086:0,87,255:40,0 chr1 109779427 . A . PASS END=109779492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,140,255:40,0 chr1 109779866 . G . PASS END=109779970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:31:0,93,1153:0,93,255:40,0 chr1 109779971 . A . PASS END=109779971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1042:0,71,255:32,0 chr1 109779972 . A . PASS END=109779995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1189:0,89,255:33,0 chr1 109780353 . G . PASS END=109780510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:33:0,87,1235:0,90,255:40,0 chr1 109792702 . A . PASS END=109792713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:12:14:0,12,180:0,25,255:4,0 chr1 109792714 . G . LowGQ END=109792734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:15,0:15:0:14:0,0,0:0,42,255:2,0 chr1 109792735 . A ACGC, 95.12 PASS DP=16;MQ=249.27;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,7,0:0,9,0:45:119,48,0,517,48,517:255,9,0:0,24:9.5124e+01,4.5124e+01,1.3357e-04,4.5000e+02,7.9894e+01,4.5000e+02:0.00,21.00,24.00,34.77,55.77,37.77:0,0,13,3:0,0,10,6 chr1 109792736 . C . LowGQ END=109792736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,17:17:0:17:0,0,0:255,51,0:16,1 chr1 109792737 . G . PASS END=109792737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:17,0 chr1 109792738 . C . PASS END=109792743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 109792744 . C . PASS END=109792744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 109792745 . C . PASS END=109792749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,1 chr1 109792750 . C . PASS END=109792750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 109792751 . T . PASS END=109792760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,629:0,41,255:19,0 chr1 109792761 . G . PASS END=109792761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 109792762 . T . PASS END=109792778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 109792779 . G . PASS END=109792793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 109792794 . A . PASS END=109792794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 109792795 . G . PASS END=109792797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:18,0 chr1 109792798 . C . PASS END=109792798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 109792799 . A . PASS END=109792802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:15,0 chr1 109792803 . G . PASS END=109792824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,435:0,36,255:13,0 chr1 109792825 . T . PASS END=109792826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 109792827 . C . PASS END=109792830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 109792831 . G . PASS END=109792882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:19,0 chr1 109792883 . C . PASS END=109792883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 109792884 . A . PASS END=109792884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 109792885 . G . PASS END=109792885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 109792886 . C . PASS END=109792905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 109792906 . A . PASS END=109792906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 109792907 . C . PASS END=109792975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:18,0 chr1 109792976 . T . PASS END=109792976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:16,0 chr1 109792977 . T . PASS END=109793031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,629:0,48,255:19,0 chr1 109793032 . C . PASS END=109793046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 109793047 . C . PASS END=109793047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 109793048 . T . PASS END=109793051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 109793052 . G . PASS END=109793056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109793057 . T . PASS END=109793062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109793063 . G . PASS END=109793071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109793072 . C . PASS END=109793080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 109793081 . G . PASS END=109793084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 109793085 . G . PASS END=109793094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 109793095 . C . PASS END=109793095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 109793096 . C . PASS END=109793101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 109793102 . A . PASS END=109793111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 109793112 . C . PASS END=109793136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:22,0 chr1 109793137 . C . PASS END=109793148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 109793149 . C . PASS END=109793149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 109793150 . T . PASS END=109793150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 109793151 . G . PASS END=109793184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,884:0,62,255:24,0 chr1 109793185 . T . PASS END=109793185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 109793186 . C . PASS END=109793201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 109793202 . G . PASS END=109793202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:22,0 chr1 109793203 . G . PASS END=109793206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,837:0,69,255:23,0 chr1 109793207 . G . PASS END=109793207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 109793208 . G . PASS END=109793231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,856:0,69,255:24,0 chr1 109793232 . A . PASS END=109793232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 109793233 . G . PASS END=109793234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 109793235 . C . PASS END=109793235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 109793236 . C . PASS END=109793241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,868:0,61,255:26,0 chr1 109793242 . T . PASS END=109793242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109793243 . T . PASS END=109793259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr1 109793260 . C . PASS END=109793261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,799:0,42,255:23,0 chr1 109793262 . G . PASS END=109793271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 109793272 . C . PASS END=109793272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 109793273 . C . PASS END=109793277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 109793278 . A . PASS END=109793278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,679:0,52,255:22,0 chr1 109793279 . A . PASS END=109793284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr1 109793285 . C . PASS END=109793285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 109793286 . A . PASS END=109793291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,793:0,66,255:23,0 chr1 109793292 . C . PASS END=109793293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 109793294 . C . PASS END=109793294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 109793295 . C . PASS END=109793295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 109793296 . C . PASS END=109793296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:18,0 chr1 109793297 . C . PASS END=109793298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 109793299 . G . PASS END=109793301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 109793302 . G . PASS END=109793303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:21,0 chr1 109793304 . A . PASS END=109793304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 109793305 . T . PASS END=109793305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:18,0 chr1 109793306 . C . PASS END=109793306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 109793307 . C . PASS END=109793308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 109793309 . T . PASS END=109793309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 109793310 . G . PASS END=109793314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 109793315 . C . PASS END=109793315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 109793316 . C . PASS END=109793325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 109793326 . G . PASS END=109793326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 109793327 . A . PASS END=109793327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 109793328 . C . PASS END=109793328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 109793329 . G . PASS END=109793330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 109793331 . G . PASS END=109793331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr1 109793332 . G . PASS END=109793332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 109793333 . G . PASS END=109793337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 109793338 . G . PASS END=109793338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 109793339 . C . PASS END=109793340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109793341 . G . PASS END=109793348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1006:0,68,255:26,0 chr1 109793349 . G . PASS END=109793350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 109793351 . A . PASS END=109793351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 109793352 . G . PASS END=109793386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1149:0,82,255:31,0 chr1 109793387 . A . PASS END=109793387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 109793388 . C . PASS END=109793389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109793390 . A . PASS END=109793390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 109793391 . G . PASS END=109793395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 109793396 . T . PASS END=109793397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109793398 . T . PASS END=109793432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:34,0 chr1 109793433 . C . PASS END=109793433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 109793434 . G . PASS END=109793489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1227:0,89,255:35,0 chr1 109793490 . C . PASS END=109793490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:32,0 chr1 109793491 . C . PASS END=109793578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1172:0,83,255:34,0 chr1 109793579 . A . PASS END=109793579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:26,0 chr1 109793580 . G . PASS END=109793580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 109793581 . T . PASS END=109793613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 109793614 . G . PASS END=109793614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 109793615 . G . PASS END=109793619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109793620 . G . PASS END=109793622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 109793623 . G . PASS END=109793625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109793626 . C . PASS END=109793626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 109793627 . T . PASS END=109793629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 109793630 . C . PASS END=109793630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:19,0 chr1 109793631 . T . PASS END=109793633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109793634 . C . PASS END=109793636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 109793637 . G . PASS END=109793640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 109793641 . A . PASS END=109793642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 109793643 . G . PASS END=109793645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr1 109793646 . T . PASS END=109793647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109793648 . G . PASS END=109793652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109793653 . G . PASS END=109793707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,623:0,43,255:19,0 chr1 109793708 . C . PASS END=109793708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 109793709 . C . PASS END=109793717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,705:0,47,255:19,0 chr1 109793718 . C . PASS END=109793797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,839:0,69,255:25,0 chr1 109793798 . C . PASS END=109793798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 109793799 . G . PASS END=109793805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1030:0,68,255:26,0 chr1 109793806 . G . PASS END=109793808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109793809 . A . PASS END=109793809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 109793810 . G . PASS END=109793869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1090:0,86,255:34,0 chr1 109793870 . A . PASS END=109793870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 109793871 . G . PASS END=109793875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 109793876 . A . PASS END=109793876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1017:0,41,255:27,0 chr1 109793877 . C . PASS END=109793882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:29,0 chr1 109793883 . T . PASS END=109793884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:28,0 chr1 109793885 . A . PASS END=109793885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 109793886 . T . PASS END=109793886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:28,0 chr1 109793887 . G . PASS END=109793887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 109793888 . C . PASS END=109793893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 109793894 . A . PASS END=109793894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,918:0,56,255:26,0 chr1 109793895 . G . PASS END=109793898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 109793899 . A . PASS END=109793899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 109793900 . G . PASS END=109793903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109793904 . G . PASS END=109793904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 109793905 . A . PASS END=109793905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1009:0,51,255:25,0 chr1 109793906 . A . PASS END=109793925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,907:0,64,255:26,0 chr1 109793926 . A . PASS END=109793926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:21,0 chr1 109793927 . G . PASS END=109793929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 109793930 . A . PASS END=109793931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 109793932 . G . PASS END=109793934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 109793935 . G . PASS END=109793935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 109793936 . T . PASS END=109793940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 109793941 . C . PASS END=109793941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 109793942 . C . PASS END=109793943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 109793944 . G . PASS END=109793947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 109793948 . C . PASS END=109793955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,848:0,61,255:24,0 chr1 109793956 . C . PASS END=109793956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 109793957 . T . PASS END=109793957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 109793958 . C . PASS END=109793958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 109793959 . C . PASS END=109793974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:26,0 chr1 109793975 . A . PASS END=109793976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109793977 . C . PASS END=109793996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 109793997 . C . PASS END=109794047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1003:0,81,255:33,0 chr1 109794048 . G . PASS END=109794048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 109794049 . G . PASS END=109794051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 109794052 . G . PASS END=109794052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 109794053 . C . PASS END=109794066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 109794067 . C . PASS END=109794067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 109794068 . T . PASS END=109794068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109794069 . G . PASS END=109794069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109794070 . G . PASS END=109794070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109794071 . A . PASS END=109794071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 109794072 . T . PASS END=109794079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 109794080 . G . PASS END=109794080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 109794081 . C . PASS END=109794083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 109794084 . T . PASS END=109794084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr1 109794085 . C . PASS END=109794086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109794087 . T . PASS END=109794087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 109794088 . G . PASS END=109794160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1163:0,80,255:34,0 chr1 109794161 . T . PASS END=109794161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:30,0 chr1 109794162 . C . PASS END=109794191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:33:0,80,1194:0,80,255:34,0 chr1 109794192 . T . PASS END=109794193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:32:0,65,1056:0,65,255:30,0 chr1 109794194 . T . PASS END=109794206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1109:0,80,255:31,0 chr1 109794207 . C . PASS END=109794207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 109794208 . C . PASS END=109794210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 109794211 . A . PASS END=109794211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 109794212 . T . PASS END=109794214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 109794215 . T . PASS END=109794215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1033:0,63,255:29,0 chr1 109794216 . C . PASS END=109794222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:30,0 chr1 109794223 . A . PASS END=109794223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 109794224 . C . PASS END=109794231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:29,0 chr1 109794232 . C . PASS END=109794232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:26,0 chr1 109794233 . A . PASS END=109794234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 109794235 . G . PASS END=109794236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 109794237 . T . PASS END=109794238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr1 109794239 . C . PASS END=109794239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 109794240 . T . PASS END=109794240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:23,0 chr1 109794241 . G . PASS END=109794249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,97,255:31,0 chr1 109794250 . A . PASS END=109794250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1007:0,63,255:26,0 chr1 109794251 . G . PASS END=109794251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 109794252 . T C, 135.90 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,14,0:0,16,0:86:174,89,0,274,274,274:255,96,0:0,0:1.3590e+02,8.5903e+01,0.0000e+00,2.7067e+02,3.0544e+02,2.7368e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,13:0,0,13,17 chr1 109794253 . G . PASS END=109794253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:28,0 chr1 109794254 . T . PASS END=109794255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1047:0,63,255:25,0 chr1 109794256 . C . PASS END=109794267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1203:0,88,255:34,0 chr1 109794268 . C . PASS END=109794268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:32,0 chr1 109794269 . T . PASS END=109794270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1135:0,85,255:34,0 chr1 109794271 . G . PASS END=109794271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:34,0 chr1 109794272 . T . PASS END=109794289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1233:0,89,255:35,0 chr1 109794290 . T . PASS END=109794424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1217:0,86,255:40,0 chr1 109794425 . T . PASS END=109794425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:34,0 chr1 109794426 . C . PASS END=109794456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,98,255:37,0 chr1 109794457 . G . PASS END=109794460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 109794461 . C . PASS END=109794471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:28,0 chr1 109794472 . A . PASS END=109794487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 109794488 . T . PASS END=109794496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:27,0 chr1 109794497 . C . PASS END=109794498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109794499 . G . PASS END=109794499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 109794500 . T . PASS END=109794500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr1 109794501 . C . PASS END=109794510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109794511 . A . PASS END=109794511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109794512 . A . PASS END=109794514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109794515 . A . PASS END=109794515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109794516 . C . PASS END=109794521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109794522 . T . PASS END=109794522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:26,0 chr1 109794523 . C . PASS END=109794524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109794525 . A . PASS END=109794527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 109794528 . C . PASS END=109794535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109794536 . A . PASS END=109794541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 109794542 . A . PASS END=109794542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109794543 . G . PASS END=109794543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 109794544 . T . PASS END=109794546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:29,0 chr1 109794547 . A . PASS END=109794549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:25,0 chr1 109794550 . G . PASS END=109794550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 109794551 . T . PASS END=109794551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:28,0 chr1 109794552 . G . PASS END=109794561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1040:0,87,255:29,0 chr1 109794562 . G . PASS END=109794562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 109794563 . A . PASS END=109794566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 109794567 . T . PASS END=109794567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 109794568 . G . PASS END=109794573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 109794574 . G . PASS END=109794574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:28,0 chr1 109794575 . T . PASS END=109794575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109794576 . G . PASS END=109794576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 109794577 . G . PASS END=109794584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 109794585 . C . PASS END=109794594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 109794595 . G . PASS END=109794595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:22,0 chr1 109794596 . T . PASS END=109794605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,961:0,65,255:23,0 chr1 109794606 . G . PASS END=109794606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 109794607 . G . PASS END=109794615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,937:0,62,255:26,0 chr1 109794616 . G . PASS END=109794622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 109794623 . G . PASS END=109794647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 109794648 . T . PASS END=109794648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:20,0 chr1 109794649 . G . PASS END=109794649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 109794650 . G . PASS END=109794651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 109794652 . A . PASS END=109794652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:21,0 chr1 109794653 . A . PASS END=109794657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,900:0,69,255:24,0 chr1 109794658 . C . PASS END=109794658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 109794659 . G . PASS END=109794662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:24,0 chr1 109794663 . C . PASS END=109794663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 109794664 . C . PASS END=109794678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 109794679 . A . PASS END=109794680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 109794681 . C . PASS END=109794683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 109794684 . A . PASS END=109794686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 109794687 . T . PASS END=109794687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:17,0 chr1 109794688 . G . PASS END=109794716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:18,0 chr1 109794717 . A . PASS END=109794717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 109794718 . C . PASS END=109794728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 109794729 . A . PASS END=109794729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:17,0 chr1 109794730 . C . PASS END=109794735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr1 109794736 . C . PASS END=109794736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,612:0,10,255:15,0 chr1 109794737 . G . PASS END=109794753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,676:0,44,255:19,0 chr1 109794754 . G . PASS END=109794770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr1 109794771 . C . PASS END=109794788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,698:0,46,255:19,0 chr1 109794789 . A . PASS END=109794792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 109794793 . A . PASS END=109794794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 109794795 . T . PASS END=109794795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 109794796 . G . PASS END=109794796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109794797 . T . PASS END=109794802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109794803 . A . PASS END=109794805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:19,0 chr1 109794806 . T . PASS END=109794811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109794812 . A . PASS END=109794812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109794813 . C . PASS END=109794821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 109794822 . C . PASS END=109794822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 109794823 . C . PASS END=109794829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109794830 . C . PASS END=109794831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109794832 . G . PASS END=109794834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109794835 . T . PASS END=109794839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 109794840 . G . PASS END=109794843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109794844 . T . PASS END=109794844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr1 109794845 . C . PASS END=109794846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 109794847 . C . PASS END=109794873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,790:0,63,255:22,0 chr1 109794874 . C . PASS END=109794874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,615:0,8,255:18,0 chr1 109794875 . G . PASS END=109794875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 109794876 . G . PASS END=109794876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 109794877 . C . PASS END=109794878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109794879 . G . PASS END=109794879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 109794880 . G . PASS END=109794880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109794881 . C . PASS END=109794882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:19,0 chr1 109794883 . G . PASS END=109794884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,706:0,24,255:17,0 chr1 109794885 . C . PASS END=109794885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 109794886 . A . PASS END=109794886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr1 109794887 . C . PASS END=109794887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 109794888 . C . PASS END=109794888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 109794889 . A . PASS END=109794889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:19,0 chr1 109794890 . C . PASS END=109794890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109794891 . G . PASS END=109794891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,709:0,35,255:19,0 chr1 109794892 . G . PASS END=109794892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109794893 . T . PASS END=109794895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,767:0,50,255:19,0 chr1 109794896 . T . PASS END=109794898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 109794899 . T . PASS END=109794899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 109794900 . G . PASS END=109794906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 109794907 . G . PASS END=109794908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 109794909 . C . PASS END=109794913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 109794914 . A . PASS END=109794915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 109794916 . G . PASS END=109794916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109794917 . A . PASS END=109794922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr1 109794923 . C . PASS END=109794924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109794925 . G . PASS END=109794926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:21,0 chr1 109794927 . T . PASS END=109794933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109794934 . G . PASS END=109794934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 109794935 . C . PASS END=109794935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109794936 . C . PASS END=109794938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109794939 . C . PASS END=109794939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 109794940 . A . PASS END=109794940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:20,0 chr1 109794941 . T . PASS END=109794942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 109794943 . A . PASS END=109794943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr1 109794944 . C . PASS END=109794950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 109794951 . C . PASS END=109794951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 109794952 . A . PASS END=109794958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 109794959 . A . PASS END=109794959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 109794960 . C . PASS END=109794971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 109794972 . G . PASS END=109794972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 109794973 . T . PASS END=109794980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109794981 . C . PASS END=109794981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 109794982 . G . PASS END=109794986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 109794987 . A . PASS END=109794988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 109794989 . A . PASS END=109795004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,627:0,40,255:19,0 chr1 109795005 . C . PASS END=109795007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 109795008 . C . PASS END=109795008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 109795009 . C . PASS END=109795009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 109795010 . A . PASS END=109795010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 109795011 . G . PASS END=109795012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 109795013 . C . PASS END=109795014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 109795015 . G . PASS END=109795015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109795016 . A . PASS END=109795016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109795017 . G . PASS END=109795017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109795018 . C . PASS END=109795018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 109795019 . T . PASS END=109795022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 109795023 . C . PASS END=109795023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 109795024 . T . PASS END=109795024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 109795025 . A . PASS END=109795025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 109795026 . T C, 115.76 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,12,0:0,11,0:66:154,69,0,855,69,855:255,69,0:0,0:1.1576e+02,6.5764e+01,1.0354e-06,4.5000e+02,1.0053e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,10:0,0,12,11 chr1 109795027 . G . PASS END=109795028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 109795029 . A . PASS END=109795029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,672:0,30,255:21,0 chr1 109795030 . G . PASS END=109795035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 109795036 . G . PASS END=109795037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 109795038 . G . PASS END=109795040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 109795041 . T . PASS END=109795041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:20,0 chr1 109795042 . T . PASS END=109795046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 109795047 . C . PASS END=109795059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 109795060 . G . PASS END=109795063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 109795064 . G . PASS END=109795064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109795065 . G . PASS END=109795065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 109795066 . G . PASS END=109795153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,65,255:26,0 chr1 109795154 . A . PASS END=109795155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 109795156 . T . PASS END=109795170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 109795171 . G . PASS END=109795177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 109795178 . A . PASS END=109795178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1139:0,66,255:27,0 chr1 109795179 . G . PASS END=109795180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:29,0 chr1 109795181 . A . PASS END=109795181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 109795182 . T . PASS END=109795184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109795185 . G . PASS END=109795185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 109795186 . C . PASS END=109795186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109795187 . C . PASS END=109795188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109795189 . C . PASS END=109795191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 109795192 . T . PASS END=109795192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 109795193 . T . PASS END=109795200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 109795201 . G . PASS END=109795244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,848:0,68,255:26,0 chr1 109795245 . C . PASS END=109795245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 109795246 . A . PASS END=109795250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:26,0 chr1 109795251 . C . PASS END=109795263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 109795264 . C . PASS END=109795264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 109795265 . A . PASS END=109795265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 109795266 . A . PASS END=109795266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,887:0,70,255:27,0 chr1 109795267 . G . PASS END=109795274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1108:0,87,255:32,0 chr1 109795275 . C . PASS END=109795275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:31,0 chr1 109795276 . G . PASS END=109795291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1117:0,82,255:34,0 chr1 109795292 . T . PASS END=109795292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1069:0,72,255:32,0 chr1 109795293 . T . PASS END=109795348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1107:0,88,255:35,0 chr1 109795349 . A . PASS END=109795349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:28,0 chr1 109795350 . C . PASS END=109795354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1147:0,90,255:30,0 chr1 109795355 . C . PASS END=109795355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 109795356 . C . PASS END=109795356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 109795357 . C . PASS END=109795357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 109795358 . A . PASS END=109795369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:31,0 chr1 109795370 . G . PASS END=109795371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 109795372 . G . PASS END=109795377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 109795378 . G . PASS END=109795379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:26,0 chr1 109795380 . A . PASS END=109795381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109795382 . T . PASS END=109795382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:27,0 chr1 109795383 . G . PASS END=109795388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109795389 . G . PASS END=109795393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 109795394 . T . PASS END=109795394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,961:0,37,255:22,0 chr1 109795395 . G . PASS END=109795463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,878:0,60,255:26,0 chr1 109795464 . T . PASS END=109795464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:21,0 chr1 109795465 . G . PASS END=109795471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 109795472 . A . PASS END=109795472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 109795473 . T . PASS END=109795496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,796:0,61,255:25,0 chr1 109795497 . G . PASS END=109795497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109795498 . A . PASS END=109795498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:26,0 chr1 109795499 . A . PASS END=109795500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109795501 . A . PASS END=109795501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 109795502 . G . PASS END=109795502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109795503 . C . PASS END=109795504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 109795505 . C . PASS END=109795506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 109795507 . A . PASS END=109795507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 109795508 . T . PASS END=109795524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1178:0,83,255:30,0 chr1 109795525 . C . PASS END=109795525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 109795526 . G . PASS END=109795554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1111:0,80,255:32,0 chr1 109795555 . A . PASS END=109795555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 109795556 . C . PASS END=109795561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 109795562 . C . PASS END=109795562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 109795563 . C . PASS END=109795566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1155:0,90,255:30,0 chr1 109795567 . A . PASS END=109795567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 109795568 . T . PASS END=109795570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 109795571 . T . PASS END=109795580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 109795581 . T . PASS END=109795584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1061:0,71,255:26,0 chr1 109795585 . G . PASS END=109795586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109795587 . G . PASS END=109795587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 109795588 . G . PASS END=109795607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1089:0,90,255:31,0 chr1 109795608 . T C, 140.30 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:90:178,93,0,1194,93,1194:255,93,0:0,0:1.4030e+02,9.0298e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,17:0,0,10,21 chr1 109795609 . C . PASS END=109795636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1202:0,93,255:31,0 chr1 109795637 . C . PASS END=109795645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:24,0 chr1 109795646 . T . PASS END=109795671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,939:0,75,255:25,0 chr1 109795672 . G . PASS END=109795672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109795673 . A . PASS END=109795691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,986:0,78,255:26,0 chr1 109795692 . G . PASS END=109795693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109795694 . C . PASS END=109795696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109795697 . C . PASS END=109795715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 109795716 . C . PASS END=109795731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,976:0,65,255:26,0 chr1 109795732 . G . PASS END=109795733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109795734 . C . PASS END=109795734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:25,0 chr1 109795735 . C . PASS END=109795735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,930:0,7,255:22,0 chr1 109795736 . G . PASS END=109795745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:24,0 chr1 109795746 . C . PASS END=109795746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109795747 . C . PASS END=109795751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109795752 . T . PASS END=109795752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109795753 . G . PASS END=109795754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109795755 . C . PASS END=109795757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109795758 . C . PASS END=109795758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 109795759 . C . PASS END=109795770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 109795771 . G . PASS END=109795771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 109795772 . G . PASS END=109795786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1093:0,90,255:33,0 chr1 109795787 . T . PASS END=109795787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr1 109795788 . T . PASS END=109795809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1219:0,99,255:39,0 chr1 109795810 . C . PASS END=109795810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:36,0 chr1 109795811 . G . PASS END=109795871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:37:0,80,1282:0,80,255:40,0 chr1 109795872 . A . PASS END=109795872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1249:0,56,255:31,0 chr1 109795873 . G . PASS END=109795890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:36:0,80,1335:0,80,255:35,0 chr1 109795891 . T . PASS END=109795891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1194:0,61,255:33,0 chr1 109795892 . T . PASS END=109795894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1340:0,92,255:34,0 chr1 109795895 . A . PASS END=109795895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 109795896 . G . PASS END=109795898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1264:0,92,255:34,0 chr1 109795899 . G . PASS END=109795899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:29,0 chr1 109795900 . G . PASS END=109795900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 109795901 . G . PASS END=109795901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:28,0 chr1 109795902 . A . PASS END=109795962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1156:0,83,255:33,0 chr1 109795963 . C . PASS END=109795997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,925:0,78,255:26,0 chr1 109795998 . C . PASS END=109796001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 109796002 . C . PASS END=109796011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 109801054 . A . PASS END=109801055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 109801056 . G . PASS END=109801083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,492:0,45,255:19,0 chr1 109801084 . C . PASS END=109801120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,653:0,54,255:19,0 chr1 109801121 . C T, 47.11 PASS DP=19;MQ=248.65;MQRankSum=2.493;ReadPosRankSum=2.916;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:4,4,0:8,3,0:46:82,0,50,250,429,679:206,0,255:12,0:4.7109e+01,1.0613e-04,5.3000e+01,2.5037e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,2,6,1:6,6,5,2 chr1 109801122 . C . PASS END=109801125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 109801126 . G . PASS END=109801146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 109801147 . A . PASS END=109801158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 109801159 . A . PASS END=109801169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 109801170 . T . PASS END=109801170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109801171 . C . PASS END=109801183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 109801184 . C . PASS END=109801184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 109801185 . C . PASS END=109801213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 109801214 . G . PASS END=109801236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:31,0 chr1 109801237 . T . PASS END=109801237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 109801238 . G . PASS END=109801270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:33,0 chr1 109801271 . C . PASS END=109801271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1083:0,27,255:27,0 chr1 109801272 . G . PASS END=109801279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:30,0 chr1 109801280 . C . PASS END=109801280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 109801281 . A . PASS END=109801283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 109801284 . C . PASS END=109801285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 109801286 . C . PASS END=109801287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 109801288 . A . PASS END=109801288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1077:0,69,255:31,0 chr1 109801289 . C . PASS END=109801341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1156:0,83,255:38,0 chr1 109801342 . T . PASS END=109801342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 109801343 . G . PASS END=109801352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1365:0,95,255:35,0 chr1 109801353 . G . PASS END=109801353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:31,0 chr1 109801354 . A . PASS END=109801355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,91,255:29,0 chr1 109801356 . C . PASS END=109801356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:29,0 chr1 109801357 . T . PASS END=109801357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,89,255:29,0 chr1 109801358 . G . PASS END=109801358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 109801359 . C . PASS END=109801359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1149:0,50,255:29,0 chr1 109801360 . A . PASS END=109801360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 109801361 . G . PASS END=109801365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:29,0 chr1 109801366 . G . PASS END=109801366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:8:34:0,8,1078:0,8,255:23,0 chr1 109801367 . C . PASS END=109801371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:36:0,61,1170:0,61,255:27,0 chr1 109801372 . A . PASS END=109801372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 109801373 . C . PASS END=109801375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:65:32:0,65,1149:0,65,255:27,0 chr1 109801376 . C . PASS END=109801381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109801382 . C . PASS END=109801388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 109801389 . C . PASS END=109801390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109801391 . G . PASS END=109801398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 109801399 . T . PASS END=109801400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 109801401 . T . PASS END=109801431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 109801432 . A . PASS END=109801432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:20,0 chr1 109801433 . C . PASS END=109801436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 109801437 . T . PASS END=109801442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 109801443 . C . PASS END=109801443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:17,0 chr1 109801444 . G . PASS END=109801469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,615:0,40,255:19,0 chr1 109801470 . T . PASS END=109801470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 109801471 . G . PASS END=109801495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,653:0,54,255:19,0 chr1 109801496 . C . PASS END=109801496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 109801497 . T . PASS END=109801513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:19,0 chr1 109801514 . C . PASS END=109801529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 109801530 . T . PASS END=109801537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109801538 . C . PASS END=109801538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 109801539 . A . PASS END=109801539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 109801540 . T . PASS END=109801540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 109801541 . C . PASS END=109801545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 109801546 . C . PASS END=109801548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 109801549 . T . PASS END=109801595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 109801596 . T . PASS END=109801599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:13,0 chr1 109801600 . A . PASS END=109801621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr1 109801622 . C . PASS END=109801625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 109801626 . C . PASS END=109801629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 109801630 . C . PASS END=109801631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 109801632 . T . PASS END=109801637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:14,0 chr1 109801638 . C . PASS END=109801654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 109801655 . C . PASS END=109801657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 109801658 . C . PASS END=109801665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109801666 . G . PASS END=109801673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 109801674 . A . PASS END=109801674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 109801675 . C . PASS END=109801677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 109801678 . G . PASS END=109801678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:9,0 chr1 109801679 . C . PASS END=109801686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 109801687 . G . PASS END=109801687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 109801688 . T . PASS END=109801688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 109801689 . G . PASS END=109801696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 109801697 . C . PASS END=109801697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 109801698 . A . PASS END=109801701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 109803664 . G . PASS END=109803672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:26,0 chr1 109803673 . G . PASS END=109803698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1063:0,80,255:32,0 chr1 109803699 . T . PASS END=109803699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:31,0 chr1 109803700 . G . PASS END=109803801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1073:0,82,255:37,0 chr1 109803802 . A . PASS END=109803815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,83,255:25,0 chr1 109803816 . A . PASS END=109803816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:22,0 chr1 109803817 . G . PASS END=109803849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,831:0,66,255:24,0 chr1 109803850 . G . PASS END=109803850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109803851 . C . PASS END=109803851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109803852 . C . PASS END=109803886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,704:0,44,255:19,0 chr1 109804135 . G . PASS END=109804145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,781:0,72,255:25,0 chr1 109804146 . A . PASS END=109804146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:24,0 chr1 109804147 . G . PASS END=109804156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,889:0,78,255:26,0 chr1 109804157 . G . PASS END=109804226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:27:0,80,962:0,80,255:39,0 chr1 109804227 . A . PASS END=109804250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,856:0,75,255:26,0 chr1 109804430 . G . PASS END=109804518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:33:0,86,1263:0,86,255:40,0 chr1 109804909 . C . PASS END=109804911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 109804912 . C . PASS END=109804919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:30,0 chr1 109804920 . T . PASS END=109804920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 109804921 . C . PASS END=109805025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:30:0,86,1111:0,86,255:40,0 chr1 109805026 . T . PASS END=109805027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1325:0,70,255:31,0 chr1 109805028 . C . PASS END=109805037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,94,255:32,0 chr1 109805038 . G . PASS END=109805045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,82,255:26,0 chr1 109805046 . C . PASS END=109805046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 109805047 . A . PASS END=109805047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:25,0 chr1 109805048 . C . PASS END=109805061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:25:0,67,963:0,67,255:26,0 chr1 109805062 . A . PASS END=109805062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:21,0 chr1 109805063 . A . PASS END=109805064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 109805065 . A . PASS END=109805065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,788:0,44,255:23,0 chr1 109805066 . A . PASS END=109805066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 109805428 . G . PASS END=109805433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 109805434 . G . PASS END=109805435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 109805436 . A . PASS END=109805439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 109805440 . G . PASS END=109805454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 109805455 . A . PASS END=109805511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:18,0 chr1 109805512 . G . PASS END=109805512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 109805513 . G . PASS END=109805519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr1 109805520 . T . PASS END=109805520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 109805521 . G . PASS END=109805537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,639:0,40,255:19,0 chr1 109805538 . A . PASS END=109805538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 109805539 . C . PASS END=109805552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 109805553 . A . PASS END=109805553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr1 109805554 . C . PASS END=109805554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 109805555 . A . PASS END=109805556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 109805557 . G . PASS END=109805557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 109805558 . G . PASS END=109805560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 109805561 . G . PASS END=109805561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 109805562 . A . PASS END=109805564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 109805565 . T . PASS END=109805565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr1 109805566 . C . PASS END=109805566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 109805567 . A . PASS END=109805567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 109805568 . T . PASS END=109805571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 109805572 . C . PASS END=109805572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 109805573 . A . PASS END=109805573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 109805574 . A . PASS END=109805574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:12,0 chr1 109805575 . C . PASS END=109805579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 109805580 . G . PASS END=109805580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 109805581 . C . PASS END=109805583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 109805584 . C . PASS END=109805591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:14:0,32,495:0,32,255:13,0 chr1 109805764 . G . PASS END=109805775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 109805776 . A . PASS END=109805776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 109805777 . G . PASS END=109805783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 109805784 . G . PASS END=109805784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 109805785 . T . PASS END=109805790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 109805791 . A . PASS END=109805791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 109805792 . C . PASS END=109805794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 109805795 . C . PASS END=109805795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 109805796 . A . PASS END=109805816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:23,0 chr1 109805817 . A . PASS END=109805818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:19,0 chr1 109805819 . T . PASS END=109805823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 109805824 . T . PASS END=109805836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 109805837 . C . PASS END=109805838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr1 109805839 . C . PASS END=109805840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 109805841 . T . PASS END=109805845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 109805846 . C . PASS END=109805853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 109805854 . G . PASS END=109805854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 109805855 . C . PASS END=109805858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109805859 . C . PASS END=109805880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 109805881 . G . PASS END=109805881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr1 109805882 . C . PASS END=109805885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 109805886 . C . PASS END=109805889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 109806233 . A . PASS END=109806233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 109806234 . A . PASS END=109806234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 109806235 . A . PASS END=109806241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:23,0 chr1 109806242 . A . PASS END=109806242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 109806243 . T . PASS END=109806267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,839:0,62,255:26,0 chr1 109806268 . C . PASS END=109806275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 109806276 . C . PASS END=109806277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109806278 . G . PASS END=109806280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 109806281 . A . PASS END=109806281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 109806282 . T . PASS END=109806284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109806285 . C . PASS END=109806285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr1 109806286 . C . PASS END=109806287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,922:0,76,255:28,0 chr1 109806288 . C . PASS END=109806296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1094:0,90,255:31,0 chr1 109806297 . C . PASS END=109806297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 109806298 . A . PASS END=109806298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 109806299 . T . PASS END=109806299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:28,0 chr1 109806300 . C . PASS END=109806304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 109806305 . A . PASS END=109806306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 109806307 . C . PASS END=109806311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 109806312 . G . PASS END=109806312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:25,0 chr1 109806313 . T C, 48.84 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=3.181;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,13,0:0.433,0.000:30:8,5,0:9,8,0:47:84,0,50,465,608,1073:255,0,255:16,0:4.8838e+01,7.8435e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,6,7:6,11,4,9 chr1 109806314 . A . PASS END=109806316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1061:0,71,255:28,0 chr1 109806317 . T . PASS END=109806331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1088:0,87,255:30,0 chr1 109806332 . G . PASS END=109806332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 109806333 . C . PASS END=109806335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1163:0,90,255:30,0 chr1 109806336 . G . PASS END=109806336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 109806337 . C . PASS END=109806337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 109806338 . G . PASS END=109806340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109806341 . A . PASS END=109806341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 109806342 . G . PASS END=109806349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:29,0 chr1 109806350 . G . PASS END=109806350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 109806351 . T . PASS END=109806365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109806366 . C . PASS END=109806382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr1 109806383 . G . PASS END=109806391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,47,255:19,0 chr1 109806392 . C . PASS END=109806399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 109806700 . C . PASS END=109806710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 109806711 . C . PASS END=109806711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 109806712 . C . PASS END=109806726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:13,0 chr1 109806727 . G . LowGQ END=109806727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 109806728 . T . PASS END=109806757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 109806758 . T . PASS END=109806760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 109806761 . G . PASS END=109806769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 109806770 . C . PASS END=109806774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 109806775 . C . PASS END=109806776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 109806777 . G . PASS END=109806779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109806780 . C . PASS END=109806796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 109806797 . A . PASS END=109806804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 109806805 . C . PASS END=109806833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 109806834 . C T, 49.45 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=2.329;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,7,0:0.438,0.000:16:3,2,0:6,5,0:48:84,0,50,250,322,572:215,0,255:9,0:4.9454e+01,7.0928e-05,5.3000e+01,2.5037e+02,3.5670e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,3,4:8,1,4,3 chr1 109806835 . G . PASS END=109806838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 109806839 . A . PASS END=109806871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:25,0 chr1 109806872 . G . PASS END=109806878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 109806879 . G . PASS END=109806902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:29,0 chr1 109806903 . T . PASS END=109806904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109806905 . G . PASS END=109806905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109806906 . T . PASS END=109806916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1078:0,74,255:26,0 chr1 109806917 . G . PASS END=109806917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr1 109806918 . C . PASS END=109806921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:22,0 chr1 109806922 . A . PASS END=109806922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:22,0 chr1 109806923 . T . PASS END=109806970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 109806971 . T . PASS END=109806971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 109806972 . T . PASS END=109806977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 109806978 . C . PASS END=109806979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 109806980 . G . PASS END=109806981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 109806982 . T . PASS END=109806987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr1 109807076 . G . PASS END=109807098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1192:0,83,255:37,0 chr1 109807099 . G A,C, 49.78 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,18,0,0:0.474,0.000,0.000:38:7,8,0,0:13,10,0,0:48:85,0,50,637,708,687,644,715,1345,1359:255,0,255:19,0:4.9775e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:12,8,11,7:7,13,11,7 chr1 109807100 . G . PASS END=109807136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1373:0,98,255:40,0 chr1 109807137 . G . PASS END=109807250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1350:0,93,255:40,0 chr1 109807490 . G . PASS END=109807502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 109807503 . C . PASS END=109807505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,630:0,60,255:20,0 chr1 109807506 . C . PASS END=109807506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 109807507 . T . PASS END=109807513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:24,0 chr1 109807514 . A . PASS END=109807514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 109807515 . T . PASS END=109807536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:25,0 chr1 109807537 . G . PASS END=109807537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:22,0 chr1 109807538 . A . PASS END=109807562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 109807563 . G . PASS END=109807563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 109807564 . C . PASS END=109807568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109807569 . T . PASS END=109807609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:17,0 chr1 109807610 . T . PASS END=109807610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 109807611 . T . PASS END=109807626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 109807627 . A . PASS END=109807631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 109807813 . G . PASS END=109807817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 109807818 . A . PASS END=109807818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 109807819 . C . PASS END=109807825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,945:0,69,255:25,0 chr1 109807826 . T . PASS END=109807826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 109807827 . G . PASS END=109807836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 109807837 . C . PASS END=109807854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:30,0 chr1 109807855 . A . PASS END=109807855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 109807856 . T . PASS END=109807924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1127:0,85,255:34,0 chr1 109807925 . C . PASS END=109807933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:26,0 chr1 109808357 . G . PASS END=109808364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 109808365 . C . PASS END=109808386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:17,0 chr1 109808387 . A . PASS END=109808387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 109808388 . C . PASS END=109808391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,662:0,54,255:19,0 chr1 109808392 . C . PASS END=109808407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:22,0 chr1 109808408 . T . PASS END=109808409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,770:0,52,255:19,0 chr1 109808410 . C . PASS END=109808411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 109808412 . C . PASS END=109808412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr1 109808413 . C . PASS END=109808413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 109808414 . A . PASS END=109808414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 109808415 . C . PASS END=109808415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 109808416 . A . PASS END=109808416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 109808417 . G . PASS END=109808439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,886:0,62,255:26,0 chr1 109808440 . C . PASS END=109808442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 109808443 . T . PASS END=109808443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr1 109808444 . G . PASS END=109808447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 109808448 . A . PASS END=109808455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 109808456 . T . PASS END=109808463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 109808464 . C . PASS END=109808465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109808466 . A . PASS END=109808467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 109808468 . C . PASS END=109808475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 109808476 . C . PASS END=109808493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109808494 . C . PASS END=109808497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr1 109808498 . T . PASS END=109808498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:21,0 chr1 109808499 . G . PASS END=109808516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 109808517 . A . PASS END=109808517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 109808518 . G . PASS END=109808528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 109808529 . A . PASS END=109808530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 109808531 . G . PASS END=109808531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109808532 . G . PASS END=109808540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,676:0,46,255:19,0 chr1 109808727 . T . PASS END=109808751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,884:0,61,255:26,0 chr1 109808752 . G . PASS END=109808755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109808756 . G . PASS END=109808757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109808758 . G . PASS END=109808758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109808759 . G . PASS END=109808759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:25,0 chr1 109808760 . C . PASS END=109808762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109808763 . G . PASS END=109808764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109808765 . A . PASS END=109808778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 109808779 . T . PASS END=109808780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109808781 . C . PASS END=109808781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109808782 . C . PASS END=109808782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109808783 . C . PASS END=109808828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 109810170 . G . PASS END=109810174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 109810175 . G . PASS END=109810189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,558:0,45,255:19,0 chr1 109810190 . G . PASS END=109810211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 109810212 . C . PASS END=109810215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 109810216 . A . PASS END=109810248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 109810249 . A . PASS END=109810260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 109810261 . C . PASS END=109810264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr1 109810473 . G . PASS END=109810496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,410:0,33,255:13,0 chr1 109810497 . T . PASS END=109810499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 109810500 . G . PASS END=109810512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:13,0 chr1 109810513 . G . PASS END=109810533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 109810534 . T . PASS END=109810547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 109810548 . G . PASS END=109810548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 109810549 . C . PASS END=109810554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 109810555 . A . PASS END=109810555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 109810556 . G . PASS END=109810561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr1 109810562 . A . PASS END=109810562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 109810563 . G . PASS END=109810568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 109810569 . T . PASS END=109810569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 109810570 . A . PASS END=109810580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 109810581 . G . PASS END=109810592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 109810593 . G . PASS END=109810602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 109810603 . T . PASS END=109810608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 109810609 . C . PASS END=109810612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 109810613 . G . PASS END=109810613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 109810614 . C . PASS END=109810662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:18,0 chr1 109810663 . A . PASS END=109810672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 109810673 . C . PASS END=109810682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 109811203 . A . PASS END=109811223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 109811224 . G . PASS END=109811224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 109811225 . C . PASS END=109811226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 109811227 . C . PASS END=109811251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,712:0,61,255:25,0 chr1 109811252 . A . PASS END=109811365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1102:0,84,255:36,0 chr1 109811366 . C . PASS END=109811376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 109811377 . C . PASS END=109811377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 109811378 . C . PASS END=109811378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109811379 . C . PASS END=109811379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:26,0 chr1 109811380 . A . PASS END=109811380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109811381 . A . PASS END=109811382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109811383 . A . PASS END=109811386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:28:0,75,1092:0,77,255:26,0 chr1 109811502 . T . PASS END=109811522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:24,0 chr1 109811523 . A . PASS END=109811523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 109811524 . C . PASS END=109811541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,823:0,69,255:25,0 chr1 109811542 . G . PASS END=109811542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 109811543 . G . PASS END=109811545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109811546 . A . PASS END=109811546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109811547 . A . PASS END=109811547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 109811548 . G . PASS END=109811552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109811553 . C . PASS END=109811553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109811554 . C . PASS END=109811563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1177:0,80,255:31,0 chr1 109811564 . G . PASS END=109811564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr1 109811565 . C . PASS END=109811586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:33,0 chr1 109811587 . G . PASS END=109811597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:26,0 chr1 109811598 . C . PASS END=109811598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109811599 . A . PASS END=109811629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 109811630 . G . PASS END=109811630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 109811732 . A . PASS END=109811737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr1 109811738 . C . PASS END=109811744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:22,0 chr1 109811745 . G . PASS END=109811745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 109811746 . G . PASS END=109811748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,892:0,69,255:23,0 chr1 109811749 . A . PASS END=109811749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 109811750 . G . PASS END=109811765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 109811766 . A . PASS END=109811766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 109811767 . G . PASS END=109811791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 109811792 . C . PASS END=109811792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 109811793 . A . PASS END=109811841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,869:0,69,255:24,0 chr1 109811842 . A . PASS END=109811869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 109811870 . G . PASS END=109811886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 109811887 . T . PASS END=109811887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr1 109811888 . A . PASS END=109811889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 109811890 . G . PASS END=109811893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 109811894 . C . PASS END=109811910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 109811911 . A . PASS END=109811911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 109811912 . G . PASS END=109811912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 109812046 . A . PASS END=109812098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,786:0,62,255:26,0 chr1 109812099 . A . PASS END=109812099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 109812100 . T . PASS END=109812100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 109812101 . G . PASS END=109812137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:30,0 chr1 109812138 . T . PASS END=109812138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 109812139 . C . PASS END=109812139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109812140 . A . PASS END=109812143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 109812144 . T . PASS END=109812153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 109812154 . C . PASS END=109812172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 109812173 . C . PASS END=109812188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1080:0,84,255:31,0 chr1 109812189 . G . PASS END=109812189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 109812190 . T . PASS END=109812204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1157:0,93,255:31,0 chr1 109812205 . T . PASS END=109812205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr1 109812206 . T . PASS END=109812209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 109812210 . T . PASS END=109812213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr1 109812316 . G . PASS END=109812428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1160:0,83,255:39,0 chr1 109812429 . T . PASS END=109812429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:30,0 chr1 109812430 . T . PASS END=109812430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:30,0 chr1 109812431 . T . PASS END=109812431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,979:0,63,255:28,0 chr1 109812432 . C . PASS END=109812441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 109812442 . G . PASS END=109812442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 109812555 . A . PASS END=109812755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:37:0,93,1395:0,111,255:40,0 chr1 109813048 . T . PASS END=109813057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 109813058 . C . PASS END=109813064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:18,0 chr1 109813065 . T . PASS END=109813065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 109813066 . G . PASS END=109813068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 109813069 . A . PASS END=109813090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:24,0 chr1 109813091 . T . PASS END=109813091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 109813092 . C . PASS END=109813095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 109813096 . A . PASS END=109813096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 109813097 . C . PASS END=109813098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 109813099 . T . PASS END=109813100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 109813101 . T . PASS END=109813142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:26,0 chr1 109813143 . C . PASS END=109813143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 109813144 . A . PASS END=109813186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,947:0,69,255:25,0 chr1 109813187 . A . PASS END=109813187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 109813188 . C . PASS END=109813189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 109813190 . T . PASS END=109813192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 109813193 . T . PASS END=109813193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,710:0,33,255:18,0 chr1 109813194 . G . PASS END=109813194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109813195 . G . PASS END=109813222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,673:0,41,255:19,0 chr1 109813549 . G . PASS END=109813630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1163:0,80,255:40,0 chr1 109813631 . T . PASS END=109813631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr1 109813632 . T . PASS END=109813661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,94,255:37,0 chr1 109813839 . A . PASS END=109813845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 109813846 . T . PASS END=109813846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:26,0 chr1 109813847 . C . PASS END=109813918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1199:0,82,255:40,0 chr1 109814008 . C . PASS END=109814134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:37:0,82,1244:0,82,255:40,0 chr1 109814222 . G . PASS END=109814321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:35:0,91,1131:0,91,255:40,0 chr1 109814322 . C . PASS END=109814322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:31,0 chr1 109814323 . C . PASS END=109814335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:32,0 chr1 109814336 . C . PASS END=109814339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 109814340 . C . PASS END=109814341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 109814342 . T . PASS END=109814342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 109814343 . C . PASS END=109814344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 109814900 . T . PASS END=109814904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 109814905 . C . PASS END=109814907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 109814908 . C . PASS END=109814908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 109814909 . T . PASS END=109815017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1023:0,80,255:35,0 chr1 109815018 . T . PASS END=109815018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:26,0 chr1 109815019 . C . PASS END=109815024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109815025 . G . PASS END=109815027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 109815262 . G . PASS END=109815289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1139:0,90,255:31,0 chr1 109815290 . G . PASS END=109815350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1224:0,83,255:34,0 chr1 109815455 . A . PASS END=109815459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,861:0,69,255:23,0 chr1 109815460 . G . PASS END=109815460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 109815461 . A . PASS END=109815510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:26,0 chr1 109815511 . T . PASS END=109815513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 109815514 . G . PASS END=109815514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 109815515 . C . PASS END=109815516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 109815517 . T . PASS END=109815517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr1 109815518 . C . PASS END=109815523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 109815524 . A . PASS END=109815524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 109815525 . C . PASS END=109815534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 109815535 . A . PASS END=109815535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 109815536 . G . PASS END=109815547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1111:0,93,255:31,0 chr1 109815548 . A . PASS END=109815549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 109815550 . G . PASS END=109815568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 109815569 . C . PASS END=109815577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 109815578 . C . PASS END=109815583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 109815584 . A . PASS END=109815584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 109815585 . G . PASS END=109815585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 109815586 . C . PASS END=109815586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 109815587 . A . PASS END=109815589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109815590 . G . PASS END=109815617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr1 109815618 . A . PASS END=109815618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 109815619 . G . PASS END=109815623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 109815624 . A . PASS END=109815624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 109815625 . C . PASS END=109815625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 109815626 . T . PASS END=109815627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 109815628 . C . PASS END=109815628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:17,0 chr1 109815629 . C . PASS END=109815634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr1 109815635 . A . PASS END=109815635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:14,0 chr1 109815636 . C . PASS END=109815640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,47,255:16,0 chr1 109815641 . C . PASS END=109815649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:16:0,33,495:0,48,255:12,0 chr1 109815788 . A . LowGQ END=109815788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:9,0 chr1 109815789 . T . PASS END=109815789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 109815790 . G . PASS END=109815797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 109815798 . A . PASS END=109815798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 109815799 . G . PASS END=109815812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 109815813 . C . PASS END=109815818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 109815819 . G . PASS END=109815819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 109815820 . C . PASS END=109815826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:16,0 chr1 109815827 . A . PASS END=109815827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:15,0 chr1 109815828 . C . PASS END=109815840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr1 109815841 . G . PASS END=109815844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 109815845 . A . PASS END=109815845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,564:0,43,255:19,0 chr1 109815846 . A . PASS END=109815846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 109815847 . G . PASS END=109815847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 109815848 . A . PASS END=109815848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:18,0 chr1 109815849 . G . PASS END=109815850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 109815851 . G . PASS END=109815851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 109815852 . T . PASS END=109815861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 109815862 . G . PASS END=109815862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 109815863 . G . PASS END=109815865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 109815866 . C . PASS END=109815866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 109815867 . C . PASS END=109815882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 109815883 . C . PASS END=109815889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,731:0,49,255:18,0 chr1 109815890 . A . PASS END=109815895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 109815896 . A . PASS END=109815896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 109815897 . T . PASS END=109815901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 109815902 . T . PASS END=109815904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109815905 . C . PASS END=109815906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 109815907 . C . PASS END=109815907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 109815908 . G . PASS END=109815909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 109815910 . G . PASS END=109815924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 109815925 . C . PASS END=109815938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr1 109815939 . T . PASS END=109815939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 109815940 . T . PASS END=109815948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 109815949 . C . PASS END=109815958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 109816058 . G . PASS END=109816058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 109816059 . C . PASS END=109816062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr1 109816063 . C . PASS END=109816064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 109816065 . T . PASS END=109816065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 109816066 . A . PASS END=109816073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 109816074 . G . PASS END=109816074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 109816075 . T . PASS END=109816098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1011:0,87,255:30,0 chr1 109816099 . A . PASS END=109816099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr1 109816100 . G . PASS END=109816103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 109816104 . C . PASS END=109816104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:28,0 chr1 109816105 . C . PASS END=109816121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 109816122 . G . PASS END=109816122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 109816123 . G . PASS END=109816123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 109816124 . A . PASS END=109816124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 109816125 . G . PASS END=109816126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 109816127 . A . PASS END=109816127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:27,0 chr1 109816128 . A . PASS END=109816131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 109816132 . A . PASS END=109816132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 109816133 . C . PASS END=109816133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 109816134 . A . PASS END=109816135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1007:0,71,255:30,0 chr1 109816136 . G . PASS END=109816138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1172:0,93,255:31,0 chr1 109816139 . C . PASS END=109816139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 109816140 . T . PASS END=109816140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:26,0 chr1 109816141 . T . PASS END=109816145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1149:0,82,255:30,0 chr1 109816146 . G . PASS END=109816146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1125:0,68,255:28,0 chr1 109816147 . G . PASS END=109816150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:29,0 chr1 109816151 . C . PASS END=109816151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 109816152 . C . PASS END=109816162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1255:0,86,255:35,0 chr1 109816163 . A . PASS END=109816163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:32,0 chr1 109816164 . G . PASS END=109816167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 109816168 . A . PASS END=109816168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1264:0,77,255:34,0 chr1 109816169 . G . PASS END=109816175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:36,0 chr1 109816176 . A C,G, 151.42 PASS DP=37;MQ=250.00;FractionInformativeReads=0.973 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,1,0:0.972,0.028,0.000:36:0,14,0,0:0,21,1,0:101:189,104,0,1257,77,161,1299,104,1257,1299:255,111,0:0,0:1.5142e+02,1.0142e+02,0.0000e+00,4.5000e+02,1.0848e+02,1.6148e+02,4.5000e+02,1.3619e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,17,19:0,0,21,15 chr1 109816177 . G . PASS END=109816200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:35:0,92,1272:0,92,255:35,0 chr1 109816201 . C . PASS END=109816201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1278:0,70,255:32,0 chr1 109816202 . G . PASS END=109816202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 109816203 . G . PASS END=109816203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:30,0 chr1 109816204 . C . PASS END=109816210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1274:0,94,255:34,0 chr1 109816211 . T . PASS END=109816211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1205:0,56,255:32,0 chr1 109816212 . C . PASS END=109816213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1356:0,108,255:36,0 chr1 109816214 . A . PASS END=109816234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1313:0,84,255:37,0 chr1 109816235 . T . PASS END=109816235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1278:0,67,255:32,0 chr1 109816236 . G . PASS END=109816236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 109816237 . C . PASS END=109816237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:33,0 chr1 109816238 . C . PASS END=109816239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 109816240 . A . PASS END=109816240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1189:0,69,255:33,0 chr1 109816241 . T . PASS END=109816244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1266:0,91,255:34,0 chr1 109816245 . C . PASS END=109816245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1214:0,72,255:31,0 chr1 109816246 . A . PASS END=109816292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1081:0,82,255:36,0 chr1 109816644 . A . PASS END=109816671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,151,255:40,0 chr1 109816783 . C . PASS END=109816804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:23,0 chr1 109817590 . G . PASS END=109817590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 109818530 . C T, 112.30 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,13,0:0,9,0:62:150,65,0,795,65,795:255,66,0:0,0:1.1230e+02,6.2302e+01,2.5886e-06,4.5000e+02,9.7072e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,8:0,0,17,5 chr1 109822743 . C . PASS END=109822778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,160,255:40,0 chr1 109823018 . C . PASS END=109823018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 109823019 . T . PASS END=109823102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,1024:0,80,255:38,0 chr1 109823103 . A . PASS END=109823103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr1 109823104 . A . PASS END=109823111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:30,0 chr1 109823399 . C . PASS END=109823403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 109823404 . T . PASS END=109823404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 109823405 . G . PASS END=109823413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr1 109823414 . C . PASS END=109823416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 109823417 . G . PASS END=109823419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109823420 . C . PASS END=109823420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109823421 . T . PASS END=109823423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 109823424 . G . PASS END=109823432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 109823433 . A . PASS END=109823433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 109823434 . G . PASS END=109823437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1213:0,99,255:34,0 chr1 109823438 . T . PASS END=109823438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:32,0 chr1 109823439 . T . PASS END=109823461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1225:0,86,255:38,0 chr1 109823462 . T . PASS END=109823462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1291:0,78,255:37,0 chr1 109823463 . T . PASS END=109823519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1094:0,90,255:39,0 chr1 109823520 . T . PASS END=109823520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 109823521 . G . PASS END=109823524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109823525 . T . PASS END=109823525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 109823526 . T . PASS END=109823534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 109823535 . A . PASS END=109823535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 109823536 . G . PASS END=109823544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 109823545 . A . PASS END=109823545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 109823546 . T . PASS END=109823556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 109823557 . A . PASS END=109823558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 109823559 . G . PASS END=109823561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 109823562 . C . PASS END=109823562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 109823563 . A . PASS END=109823564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 109823565 . T . PASS END=109823565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:26,0 chr1 109823566 . T . PASS END=109823572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 109823573 . A . PASS END=109823574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 109823575 . G . PASS END=109823575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 109823576 . A . PASS END=109823576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1026:0,57,255:27,0 chr1 109823577 . T . PASS END=109823580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 109823581 . G . PASS END=109823612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 109823613 . A . PASS END=109823613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr1 109823614 . G . PASS END=109823619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,852:0,61,255:25,0 chr1 109823620 . C . PASS END=109823620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:23,0 chr1 109823621 . T . PASS END=109823627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:23,0 chr1 109823628 . A . PASS END=109823628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:21,0 chr1 109823629 . G . PASS END=109823644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 109823645 . C . PASS END=109823645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 109823646 . G . PASS END=109823651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,876:0,61,255:26,0 chr1 109823652 . G . PASS END=109823652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109823653 . A . PASS END=109823655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 109823656 . G . PASS END=109823657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109823658 . G . PASS END=109823658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr1 109823659 . G . PASS END=109823660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 109823661 . G . PASS END=109823669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 109823670 . T . PASS END=109823670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:25,0 chr1 109823671 . G . PASS END=109823781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1294:0,92,255:39,0 chr1 109823782 . C . PASS END=109823782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:33,0 chr1 109823783 . C . PASS END=109823816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:36:0,86,1211:0,86,255:37,0 chr1 109823817 . A . PASS END=109823817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:32,0 chr1 109823818 . A . PASS END=109823819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 109823820 . A . PASS END=109823820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1236:0,75,255:32,0 chr1 109823821 . G . PASS END=109823824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:35:0,98,1418:0,98,255:33,0 chr1 109823825 . A . PASS END=109823825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:49:37:0,49,1160:0,49,255:34,0 chr1 109823826 . A . PASS END=109823843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1197:0,94,255:36,0 chr1 109823844 . T . PASS END=109823844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1278:0,78,255:33,0 chr1 109823845 . G . PASS END=109823864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1219:0,88,255:34,0 chr1 109823865 . G . PASS END=109823865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 109823866 . G . PASS END=109823867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 109823868 . T . PASS END=109823868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 109823869 . G . PASS END=109823869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 109823870 . A . PASS END=109823870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 109823871 . C . PASS END=109823873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 109824241 . C . PASS END=109824254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1090:0,82,255:33,0 chr1 109824255 . A . PASS END=109824255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr1 109824256 . G . PASS END=109824306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1148:0,99,255:38,0 chr1 109824307 . A . PASS END=109824307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1254:0,75,255:36,0 chr1 109824308 . T . PASS END=109824364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,86,255:37,0 chr1 109824365 . T . PASS END=109824365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,914:0,48,255:27,0 chr1 109824366 . T . PASS END=109824379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:28,0 chr1 109824380 . A . PASS END=109824403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,939:0,75,255:26,0 chr1 109824404 . A . PASS END=109824411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 109824412 . G . PASS END=109824426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:23,0 chr1 109824427 . A . PASS END=109824427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 109824428 . C . PASS END=109824429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 109824430 . G . PASS END=109824467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:18,0 chr1 109824468 . T . PASS END=109824468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:14,0 chr1 109824469 . C . PASS END=109824477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 109824478 . C . PASS END=109824478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 109824479 . T . PASS END=109824509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,559:0,41,255:19,0 chr1 109824510 . G . PASS END=109824510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 109824511 . C . PASS END=109824521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,463:0,48,255:16,0 chr1 109824522 . C . PASS END=109824522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 109824523 . A . PASS END=109824527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 109824528 . G . PASS END=109824528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 109824529 . G . PASS END=109824530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 109824531 . T . PASS END=109824531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:15,0 chr1 109824532 . C . PASS END=109824541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 109824542 . T . PASS END=109824542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 109824543 . T . PASS END=109824544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 109824545 . T . PASS END=109824545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 109824546 . C . PASS END=109824555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 109824556 . G . PASS END=109824557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 109824558 . G . PASS END=109824561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 109824562 . T . PASS END=109824563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 109824564 . G . PASS END=109824564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 109824565 . G . PASS END=109824565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 109824566 . C . PASS END=109824577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 109824578 . C . PASS END=109824581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109824582 . G . PASS END=109824582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 109824583 . G . PASS END=109824590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 109824591 . G . PASS END=109824592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 109824593 . G . PASS END=109824597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 109824598 . T . PASS END=109824599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 109824600 . C . PASS END=109824602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 109824603 . T . PASS END=109824603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 109824604 . T . PASS END=109824623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,778:0,63,255:24,0 chr1 109824624 . G . PASS END=109824624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 109824625 . G . PASS END=109824633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 109824634 . A . PASS END=109824634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 109824635 . A . PASS END=109824641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,900:0,72,255:24,0 chr1 109824642 . T . PASS END=109824642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 109824643 . C . PASS END=109824656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 109824657 . A . PASS END=109824657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 109824658 . C . PASS END=109824666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 109824667 . G . PASS END=109824668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 109824669 . C . PASS END=109824669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 109824670 . T . PASS END=109824670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 109824671 . T . PASS END=109824675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 109824676 . C . PASS END=109824681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 109824682 . G . PASS END=109824682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 109825140 . C . PASS END=109825197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,104,1458:0,104,255:40,0 chr1 109825302 . C . PASS END=109825320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1267:0,81,255:36,0 chr1 109836861 . T . PASS END=109836871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 109837733 . C . PASS END=109837760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr1 109837761 . T . PASS END=109837763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 109837764 . C . PASS END=109837765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 109837766 . C . PASS END=109837885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:31:0,83,1149:0,83,255:40,0 chr1 109837886 . T . PASS END=109837886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 109837887 . A . PASS END=109837890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 109837891 . A . PASS END=109837897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 109837898 . T . PASS END=109837907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 109837908 . G . PASS END=109837908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 109837909 . A . PASS END=109837909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:26,0 chr1 109837910 . T . PASS END=109837919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:22,0 chr1 109838856 . C . PASS END=109838859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 109838860 . G . PASS END=109838860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 109838861 . G . PASS END=109838863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 109838864 . A . PASS END=109838864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:23,0 chr1 109838865 . G . PASS END=109838917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1025:0,80,255:39,0 chr1 109838918 . C T, 167.39 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,20,0:0,20,0:117:205,120,0,1543,120,1543:255,120,0:0,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,17:0,0,21,19 chr1 109838919 . G . PASS END=109838955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,105,1482:0,107,255:40,0 chr1 109838956 . T . PASS END=109838976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,89,255:36,0 chr1 109838977 . G . PASS END=109838992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,70,255:24,0 chr1 109839405 . C . PASS END=109839409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,648:0,60,255:21,0 chr1 109839410 . T . PASS END=109839410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 109839411 . T . PASS END=109839412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:23,0 chr1 109839413 . T . PASS END=109839413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 109839414 . G . PASS END=109839425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,845:0,65,255:26,0 chr1 109839426 . G . PASS END=109839428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 109839429 . C . PASS END=109839430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 109839431 . G . PASS END=109839432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 109839433 . A G, 130.81 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,11,0:0,17,0:81:169,84,0,1048,84,1048:255,90,0:0,0:1.3081e+02,8.0809e+01,0.0000e+00,4.5000e+02,1.1558e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,13:0,0,14,14 chr1 109839434 . G . PASS END=109839435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:30,0 chr1 109839436 . G . PASS END=109839436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:31,0 chr1 109839437 . A . PASS END=109839470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1166:0,80,255:40,0 chr1 109839471 . C . PASS END=109839541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1260:0,87,255:40,0 chr1 109839542 . T . PASS END=109839552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:29:0,63,945:0,87,255:25,0 chr1 109839553 . C . PASS END=109839553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 109839554 . G . PASS END=109839555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:19,0 chr1 109839556 . G . PASS END=109839564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,55,255:17,0 chr1 109839672 . C . PASS END=109839678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,767:0,66,255:23,0 chr1 109839679 . T . PASS END=109839679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,642:0,52,255:22,0 chr1 109839680 . T . PASS END=109839689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:25,0 chr1 109839690 . C . PASS END=109839693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 109839694 . T . PASS END=109839694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr1 109839695 . G . PASS END=109839701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:31,0 chr1 109839702 . G . PASS END=109839702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 109839703 . T . PASS END=109839703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 109839704 . A . PASS END=109839704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 109839705 . T . PASS END=109839749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1142:0,85,255:35,0 chr1 109839750 . C . PASS END=109839750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 109839751 . A . PASS END=109839751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:26,0 chr1 109839752 . G . PASS END=109839753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 109839754 . G . PASS END=109839777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,787:0,61,255:26,0 chr1 109839778 . A . PASS END=109839778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 109839779 . C . PASS END=109839795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:21,0 chr1 109839796 . G . PASS END=109839796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 109839797 . G . PASS END=109839805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 109839806 . G . PASS END=109839806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 109839807 . C . PASS END=109839807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 109839808 . C . PASS END=109839811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 109840044 . C . PASS END=109840048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 109840049 . A . PASS END=109840049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:22,0 chr1 109840050 . C . PASS END=109840058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:26,0 chr1 109840059 . C . PASS END=109840064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1025:0,87,255:29,0 chr1 109840065 . T . PASS END=109840065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 109840066 . G . PASS END=109840083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1064:0,80,255:34,0 chr1 109840084 . A . PASS END=109840084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr1 109840085 . C . PASS END=109840198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:33:0,85,1223:0,85,255:40,0 chr1 109840199 . C . PASS END=109840207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 109840208 . T . PASS END=109840215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109840216 . G . PASS END=109840238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr1 109840239 . C . PASS END=109840239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 109840791 . C . PASS END=109840879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:37:0,91,1383:0,91,255:40,0 chr1 109849469 . C . PASS END=109849469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr1 109849470 . T . PASS END=109849470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 109849471 . T . PASS END=109849471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:13,0 chr1 109849472 . C . PASS END=109849472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 109849473 . T . LowGQ END=109849473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,380:13,0,255:11,0 chr1 109849474 . A . PASS END=109849474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr1 109849475 . T . PASS END=109849475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 109849476 . A . PASS END=109849476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 109849477 . G . PASS END=109849479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 109849480 . G . PASS END=109849500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 109849501 . C . PASS END=109849501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,438:0,31,255:15,0 chr1 109849502 . T . PASS END=109849509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:17,0 chr1 109849510 . C . PASS END=109849510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr1 109849511 . C . PASS END=109849513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,631:0,54,255:19,0 chr1 109849514 . G . PASS END=109849525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,728:0,69,255:23,0 chr1 109849526 . C . PASS END=109849526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 109849527 . C . PASS END=109849528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr1 109849529 . G . PASS END=109849529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 109849530 . G . PASS END=109849531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 109849532 . G . PASS END=109849532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 109849533 . T . PASS END=109849533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 109849534 . G . PASS END=109849535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 109849536 . T . PASS END=109849537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 109849538 . C . PASS END=109849538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 109849539 . A . PASS END=109849539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 109849540 . G . PASS END=109849540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 109849541 . C . PASS END=109849548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 109849549 . G . PASS END=109849549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 109849550 . G . PASS END=109849550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 109849551 . G . PASS END=109849561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,811:0,72,255:25,0 chr1 109849562 . T . PASS END=109849562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 109849563 . C . PASS END=109849572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,1008:0,68,255:27,0 chr1 109849573 . T . PASS END=109849573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109849574 . T . PASS END=109849574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 109849575 . G . PASS END=109849577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 109849578 . T . PASS END=109849597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:25,0 chr1 109849598 . C . PASS END=109849598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 109849599 . T . PASS END=109849600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 109849601 . T . PASS END=109849601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 109849602 . G . PASS END=109849603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 109849604 . C . PASS END=109849606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 109849607 . C . PASS END=109849611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 109849612 . A . PASS END=109849613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 109856665 . C . PASS END=109856679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,163,255:40,0 chr1 109856883 . C . PASS END=109856883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 109856884 . T . PASS END=109856884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:33,0 chr1 109856885 . C . PASS END=109856886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 109856887 . T . PASS END=109856887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:35,0 chr1 109856888 . C . PASS END=109856895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1341:0,81,255:38,0 chr1 109856896 . T . PASS END=109856896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1357:0,70,255:35,0 chr1 109856897 . C . PASS END=109856902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1412:0,87,255:38,0 chr1 109856903 . A . PASS END=109856903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1262:0,72,255:36,0 chr1 109856904 . A . PASS END=109856905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1421:0,81,255:36,0 chr1 109856906 . C . PASS END=109856995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1215:0,82,255:40,0 chr1 109856996 . G . PASS END=109857001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:26,0 chr1 109857002 . G . PASS END=109857006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 109857294 . C . PASS END=109857400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:42:0,95,1558:0,95,255:40,0 chr1 109859472 . C . PASS END=109859580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1215:0,93,255:40,0 chr1 109860475 . C . PASS END=109860591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:82:43:0,82,1287:0,82,255:40,0 chr1 109865554 . C . PASS END=109865559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1020:0,90,255:30,0 chr1 109865560 . A . PASS END=109865560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 109865561 . A . PASS END=109865743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:30:0,80,1076:0,80,255:40,0 chr1 109867521 . A . PASS END=109867524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 109867525 . C . PASS END=109867525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 109867526 . C . PASS END=109867533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 109867534 . G . PASS END=109867534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 109867535 . A . PASS END=109867535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:24,0 chr1 109867536 . T . PASS END=109867545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,970:0,67,255:28,0 chr1 109867546 . A . PASS END=109867678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:31:0,82,1194:0,82,255:40,0 chr1 109867679 . G . PASS END=109867679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr1 109867680 . T . PASS END=109867688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,94,255:33,0 chr1 109867689 . A . PASS END=109867699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:31:0,60,900:0,76,255:26,0 chr1 109867700 . T . PASS END=109867711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:23:0,45,675:0,53,255:18,0 chr1 109869614 . T . PASS END=109869758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,116,1560:0,116,255:40,0 chr1 109869759 . C . PASS END=109869759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:38,0 chr1 109869760 . T . PASS END=109869763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,113,1551:0,113,255:40,0 chr1 109869764 . A . PASS END=109869764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1380:0,79,255:36,0 chr1 109869765 . T . PASS END=109869780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1350:0,108,255:39,0 chr1 109869781 . A . PASS END=109869781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1149:0,58,255:25,0 chr1 109869782 . C . PASS END=109869782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 109870121 . C . PASS END=109870214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1215:0,89,255:40,0 chr1 109870215 . A . PASS END=109870218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1169:0,69,255:26,0 chr1 109870219 . C . PASS END=109870221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 109870222 . C . PASS END=109870223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 109878862 . C . PASS END=109878968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:65:0,120,1800:0,177,255:40,0 chr1 109883346 . C . PASS END=109883349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 109883350 . G . PASS END=109883350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 109883351 . G . PASS END=109883353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 109883354 . A . PASS END=109883354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 109883355 . G . PASS END=109883501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:28:0,83,1011:0,83,255:40,0 chr1 109884636 . C . PASS END=109884654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:24,0 chr1 109884655 . C . PASS END=109884737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:31:0,89,1111:0,89,255:40,0 chr1 109884738 . T . PASS END=109884749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:35,0 chr1 109884750 . C . PASS END=109884757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 109884758 . A . PASS END=109884758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 109884759 . C . PASS END=109884774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,947:0,64,255:26,0 chr1 109884775 . T G, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=0.974;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:2,8,0:11,5,0:48:85,0,50,456,436,892:255,0,255:12,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,7,6:6,7,6,7 chr1 109884776 . G . PASS END=109884776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 109884777 . T . PASS END=109884780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 109888373 . C . PASS END=109888503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:38:0,114,1393:0,114,255:40,0 chr1 109890105 . T . PASS END=109890154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:43:0,114,1710:0,123,255:40,0 chr1 109893551 . C . PASS END=109893624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:72:0,120,1800:0,178,255:40,2 chr1 109896989 . T . PASS END=109897065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:87:37:0,87,1321:0,87,255:40,0 chr1 109897066 . C . PASS END=109897102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,159,255:40,0 chr1 109897103 . A G, 48.91 PASS DP=63;MQ=250.00;MQRankSum=6.771;ReadPosRankSum=5.498;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,28,0:0.444,0.000:63:18,11,0:17,17,0:47:84,0,50,973,1223,2195:255,0,255:32,0:4.8912e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,23,12,16:17,18,11,17 chr1 109897104 . A . PASS END=109897140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,99,1485:0,147,255:40,0 chr1 109897141 . C . PASS END=109897153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:35:0,99,1485:0,105,255:35,0 chr1 109897989 . C . PASS END=109898091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:69:0,120,1800:0,174,255:40,0 chr1 109910030 . C . PASS END=109910103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,141,255:40,0 chr1 109912152 . C . PASS END=109912211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,155,255:40,0 chr1 109939924 . T . PASS END=109939952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:45:0,83,1305:0,83,255:39,0 chr1 109939953 . A . PASS END=109939953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1345:0,66,255:28,0 chr1 109939954 . T . PASS END=109939957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:46:0,87,1305:0,121,255:31,0 chr1 109939958 . G . PASS END=109939958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:49:46:0,49,1397:0,49,255:27,0 chr1 109939959 . A . PASS END=109939962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:46:0,90,1350:0,105,255:31,0 chr1 109940209 . C . PASS END=109940218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 109940219 . T . PASS END=109940224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 109940225 . G . PASS END=109940225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 109940226 . C . PASS END=109940230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 109940231 . T . PASS END=109940231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 109940232 . T . PASS END=109940237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 109940238 . C . PASS END=109940238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 109940239 . G . PASS END=109940239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 109940240 . A . PASS END=109940240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 109940241 . A . PASS END=109940243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 109940244 . C . PASS END=109940250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr1 109940251 . C . PASS END=109940357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,4,70:3,0 chr1 109940358 . G . PASS END=109940366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:6,0 chr1 109940367 . A . PASS END=109940367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 109940368 . G . PASS END=109940378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr1 109940379 . G . PASS END=109940393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 109940394 . G . PASS END=109940394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 109940395 . C . PASS END=109940416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 109940417 . C . PASS END=109940417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 109940418 . T . PASS END=109940421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 109940422 . G . PASS END=109940459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,358:0,30,255:11,0 chr1 109940460 . C . PASS END=109940473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 109940474 . C . PASS END=109940493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:5:0,12,180:0,15,186:5,0 chr1 109940494 . A . LowGQ END=109940514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:1:0,0,16:0,0,16:1,0 chr1 109944635 . T . PASS END=109944712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,109,1753:0,109,255:40,0 chr1 109952550 . C . PASS END=109952636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:54:0,120,1800:0,146,255:40,0 chr1 109953633 . C . PASS END=109953637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 109953638 . G . PASS END=109953638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 109953639 . G . PASS END=109953639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 109953640 . T . PASS END=109953640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:24,0 chr1 109953641 . A . PASS END=109953644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 109953645 . T . PASS END=109953650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr1 109953651 . C . PASS END=109953691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1016:0,81,255:36,0 chr1 109953692 . G . PASS END=109953692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:31,0 chr1 109953693 . A . PASS END=109953700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:32,0 chr1 109953701 . A . PASS END=109953701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:30,0 chr1 109953702 . C . PASS END=109953709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:29,0 chr1 109953710 . A . PASS END=109953710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1005:0,68,255:26,0 chr1 109953711 . G . PASS END=109953717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 109953718 . G . PASS END=109953735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,70,255:26,0 chr1 109954499 . A . PASS END=109954557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,120,1800:0,173,255:40,0 chr1 109954699 . C . PASS END=109954806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,137,255:40,0 chr1 109955690 . C . PASS END=109955757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,111,1665:0,137,255:40,0 chr1 109957859 . C . PASS END=109957877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1341:0,101,255:38,0 chr1 109957878 . T . PASS END=109957878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:37,0 chr1 109957879 . A . PASS END=109957954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:36:0,93,1395:0,104,255:40,0 chr1 109957955 . A . PASS END=109957955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:30,0 chr1 109957956 . T . PASS END=109957969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:33,0 chr1 109957970 . T . PASS END=109957970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:29,0 chr1 109957971 . G . PASS END=109957981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:30,0 chr1 109957982 . C . PASS END=109957982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 109957983 . A . PASS END=109957984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 109957985 . G . PASS END=109957985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:25,0 chr1 109964482 . C . PASS END=109964548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,188,255:40,0 chr1 109968924 . C . PASS END=109968924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:20,0 chr1 109968925 . T . PASS END=109968926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:26:0,66,990:0,68,255:28,0 chr1 109968927 . T . PASS END=109968928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 109968929 . G . PASS END=109968929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:28,0 chr1 109968930 . T . PASS END=109968930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:29,0 chr1 109968931 . A . PASS END=109968931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 109968932 . C . PASS END=109968933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,970:0,60,255:27,0 chr1 109968934 . C . PASS END=109968936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 109968937 . A . PASS END=109968937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,813:0,53,255:27,0 chr1 109968938 . C . PASS END=109968938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 109968939 . C . PASS END=109968940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,972:0,70,255:28,0 chr1 109968941 . G . PASS END=109968941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 109968942 . G . PASS END=109968942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,963:0,46,255:28,0 chr1 109968943 . T . PASS END=109968945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 109968946 . G . PASS END=109968946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 109968947 . A . PASS END=109968950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 109968951 . A . PASS END=109968951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 109968952 . T . PASS END=109968952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 110009466 . A . PASS END=110009471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 110009472 . T . PASS END=110009480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 110009481 . A . PASS END=110009481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 110009482 . G . PASS END=110009485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:24,0 chr1 110009486 . C . PASS END=110009486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 110009487 . G . PASS END=110009495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 110009496 . G . PASS END=110009496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 110009497 . C . PASS END=110009508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr1 110009509 . C . PASS END=110009509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 110009510 . G . PASS END=110009510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110009511 . C . PASS END=110009511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 110009512 . G . PASS END=110009519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 110009681 . G . PASS END=110009700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,714:0,57,255:19,0 chr1 110009701 . G . PASS END=110009713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 110009714 . C . PASS END=110009714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 110009715 . G . PASS END=110009718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 110009719 . G . PASS END=110009719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 110009720 . G . PASS END=110009723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 110009724 . A . PASS END=110009724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 110009725 . G . PASS END=110009725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110009726 . C . PASS END=110009726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr1 110009727 . C . PASS END=110009741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 110009742 . A . PASS END=110009742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 110009743 . A . PASS END=110009755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 110018203 . C . PASS END=110018213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 110018214 . T . PASS END=110018214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 110018215 . T . PASS END=110018220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:26,0 chr1 110018221 . T . PASS END=110018307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1102:0,83,255:38,0 chr1 110018308 . G . PASS END=110018310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,79,255:26,0 chr1 110018311 . T . PASS END=110018311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 110018312 . T . PASS END=110018312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,965:0,76,255:27,0 chr1 110018313 . T . PASS END=110018317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:28,0 chr1 110018318 . A . PASS END=110018318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110018319 . T . PASS END=110018319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110018320 . C . PASS END=110018327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,964:0,70,255:25,0 chr1 110019398 . G . PASS END=110019569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1148:0,94,255:40,0 chr1 110019570 . T . PASS END=110019570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 110019571 . A . PASS END=110019571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 110019572 . C . PASS END=110019590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr1 110019591 . C . PASS END=110019591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 110019592 . C . PASS END=110019599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 110020440 . G . PASS END=110020456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr1 110020457 . C . PASS END=110020457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:19,0 chr1 110020458 . T . PASS END=110020496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,703:0,63,255:23,0 chr1 110020497 . G . PASS END=110020497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 110020498 . G . PASS END=110020513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,878:0,69,255:25,0 chr1 110020514 . T . PASS END=110020514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 110020515 . G . PASS END=110020524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 110020525 . C . PASS END=110020526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 110020527 . A . PASS END=110020573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr1 110020574 . G . PASS END=110020587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:18,0 chr1 110020588 . G . PASS END=110020601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:13:0,36,459:0,39,255:13,0 chr1 110020602 . C . PASS END=110020631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,197:0,21,197:9,0 chr1 110022000 . C . PASS END=110022004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,964:0,84,255:29,0 chr1 110022005 . T . PASS END=110022005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:28,0 chr1 110022006 . G . PASS END=110022014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 110022015 . A . PASS END=110022015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:27,0 chr1 110022016 . A . PASS END=110022017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:28,0 chr1 110022018 . T . PASS END=110022018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 110022019 . T . PASS END=110022019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110022020 . C . PASS END=110022020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 110022021 . T . PASS END=110022027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110022028 . G . PASS END=110022028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 110022029 . G . PASS END=110022082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,898:0,84,255:34,0 chr1 110022083 . G . PASS END=110022083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 110022084 . G . PASS END=110022084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 110022085 . G . PASS END=110022089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr1 110022090 . G . PASS END=110022132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1196:0,83,255:33,0 chr1 110022133 . A . PASS END=110022134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 110022135 . A . PASS END=110022139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 110022140 . A . PASS END=110022165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,68,255:25,0 chr1 110022166 . A . PASS END=110022170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 110022740 . A . PASS END=110022755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,108,1620:0,129,255:40,0 chr1 110026576 . A . PASS END=110026581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 110026582 . G . PASS END=110026676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,489:0,40,255:19,0 chr1 110026677 . G . PASS END=110026695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 110026696 . G . PASS END=110026696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr1 110026697 . C . PASS END=110026702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 110027954 . A . PASS END=110027960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr1 110027961 . G . PASS END=110027961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 110027962 . G . PASS END=110027962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 110027963 . T . PASS END=110027965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 110027966 . A . PASS END=110027975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:16,0 chr1 110027976 . C . PASS END=110027976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 110027977 . C . PASS END=110027988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr1 110027989 . C . PASS END=110027992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 110027993 . T . PASS END=110027993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 110027994 . A . PASS END=110028002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 110028003 . A . PASS END=110028003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 110028004 . G . PASS END=110028005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 110028006 . G . PASS END=110028006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 110028007 . A . PASS END=110028026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:24,0 chr1 110028027 . A . PASS END=110028027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 110028028 . G . PASS END=110028035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110028036 . A . PASS END=110028036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 110028037 . G . PASS END=110028061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 110028062 . T . PASS END=110028062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 110028063 . T . PASS END=110028078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:22,0 chr1 110028079 . C . PASS END=110028119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 110028120 . G . PASS END=110028127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 110028128 . T . PASS END=110028131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 110028679 . G . PASS END=110028744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,127,255:40,0 chr1 110029128 . A . PASS END=110029232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:40:0,109,1367:0,109,255:40,0 chr1 110029629 . A . PASS END=110029677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 110029678 . A . PASS END=110029678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:6,0 chr1 110029679 . C . PASS END=110029684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 110029685 . G . PASS END=110029685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 110029686 . C . PASS END=110029687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110029688 . C . PASS END=110029689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 110029690 . T . LowGQ END=110029690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,233:17,0,250:8,0 chr1 110029691 . G . PASS END=110029691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 110029692 . C . PASS END=110029700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,297:0,30,255:10,0 chr1 110029701 . A . PASS END=110029707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110029708 . C . PASS END=110029708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,286:0,13,255:8,0 chr1 110029709 . C . PASS END=110029710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110029711 . T . PASS END=110029711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 110029712 . G . PASS END=110029712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 110029713 . T . PASS END=110029713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 110029714 . A . PASS END=110029729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 110029730 . C . PASS END=110029730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 110029731 . C . PASS END=110029747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:15,0 chr1 110029748 . G . PASS END=110029748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 110029749 . G . PASS END=110029757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 110029758 . A . PASS END=110029758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr1 110029759 . A . PASS END=110029760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110029761 . C . PASS END=110029761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 110029762 . C . PASS END=110029763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,415:0,42,255:14,0 chr1 110029764 . C . PASS END=110029764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 110029765 . C . PASS END=110029765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 110029766 . T . PASS END=110029766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 110029767 . C . PASS END=110029767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110029768 . C . PASS END=110029769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,455:0,26,255:12,0 chr1 110029770 . G . PASS END=110029793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 110029794 . G . PASS END=110029794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 110029795 . C . PASS END=110029795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:10,0 chr1 110029796 . C . PASS END=110029806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 110029807 . G . PASS END=110029811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 110029812 . C . PASS END=110029812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:6,0 chr1 110029813 . T . PASS END=110029821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:7,0 chr1 110029822 . C . PASS END=110029823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 110029824 . A . PASS END=110029826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr1 110029827 . A . PASS END=110029827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 110029828 . G . PASS END=110029838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 110029839 . G . LowGQ END=110029839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:13,0,168:5,0 chr1 110030140 . C . PASS END=110030141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 110030142 . T . PASS END=110030142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 110030143 . T . PASS END=110030145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 110030146 . C . LowGQ END=110030146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,347:8,0,255:11,0 chr1 110030147 . G . PASS END=110030150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 110030151 . C . PASS END=110030151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 110030152 . T . PASS END=110030153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:12,0 chr1 110030154 . T . PASS END=110030165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,446:0,42,255:16,0 chr1 110030166 . A . PASS END=110030166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr1 110030167 . G . PASS END=110030171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,507:0,48,255:16,0 chr1 110030172 . T . PASS END=110030172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 110030173 . G . PASS END=110030173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 110030174 . T . PASS END=110030182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,623:0,43,255:19,0 chr1 110030183 . C . PASS END=110030188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 110030189 . C . PASS END=110030189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 110030190 . C . PASS END=110030194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:21,0 chr1 110030195 . G . PASS END=110030195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 110030196 . G . PASS END=110030209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 110030210 . G . PASS END=110030210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 110030211 . T . PASS END=110030214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110030215 . C . PASS END=110030215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 110030216 . C . PASS END=110030219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 110030220 . C . PASS END=110030222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 110030223 . C . PASS END=110030226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 110030227 . T . PASS END=110030227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:20,0 chr1 110030228 . T . PASS END=110030236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 110030237 . C . PASS END=110030310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,529:0,45,255:19,0 chr1 110030311 . A . PASS END=110030311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 110030312 . G . PASS END=110030312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 110030313 . A . PASS END=110030313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:13,0 chr1 110030314 . G . PASS END=110030315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 110030316 . A . PASS END=110030321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 110030322 . A . PASS END=110030346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 110030347 . T . PASS END=110030347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 110030348 . C . PASS END=110030351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 110030352 . G . PASS END=110030358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110030359 . A . PASS END=110030379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 110030380 . G . PASS END=110030397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 110030398 . G . PASS END=110030398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 110030399 . C . PASS END=110030403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 110030404 . T . PASS END=110030410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:11,0 chr1 110030411 . C . PASS END=110030412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 110030413 . C . PASS END=110030426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:6:0,18,210:0,18,210:6,0 chr1 110031005 . G . PASS END=110031020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:18,0 chr1 110031021 . C . PASS END=110031029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,937:0,69,255:25,0 chr1 110031030 . G . PASS END=110031041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 110031042 . A . PASS END=110031042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr1 110031043 . A . PASS END=110031075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1149:0,90,255:31,0 chr1 110031076 . T . PASS END=110031077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:27,0 chr1 110031078 . G . PASS END=110031087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 110031469 . A . PASS END=110031481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:12,0 chr1 110031482 . A . PASS END=110031482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 110031483 . C . PASS END=110031486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 110031487 . C . PASS END=110031487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 110031488 . G . PASS END=110031535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 110031536 . A . LowGQ END=110031536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 110031537 . G . PASS END=110031538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 110031539 . T . PASS END=110031539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 110031540 . G . PASS END=110031553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 110031554 . G . PASS END=110031554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 110031555 . C . PASS END=110031559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,451:0,36,255:13,0 chr1 110031560 . G . PASS END=110031560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,435:0,11,255:13,0 chr1 110031561 . G . PASS END=110031561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 110031562 . G . PASS END=110031575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 110031576 . G . PASS END=110031578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110031579 . G . PASS END=110031580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110031581 . G . PASS END=110031591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 110031592 . A . PASS END=110031593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110031594 . G . PASS END=110031662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,552:0,45,255:17,0 chr1 110031663 . T . PASS END=110031678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 110031679 . T . PASS END=110031679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 110031680 . C . PASS END=110031695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 110031696 . G . PASS END=110031700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 110031701 . A . PASS END=110031708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 110031709 . T . PASS END=110031709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 110031710 . G . PASS END=110031711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 110031712 . G . PASS END=110031712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 110031713 . C . PASS END=110031722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 110031905 . G . PASS END=110031952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,974:0,84,255:35,0 chr1 110031953 . C . PASS END=110031962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1159:0,102,255:34,0 chr1 110032552 . G . PASS END=110032574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 110032575 . A . PASS END=110032603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:9,0 chr1 110032604 . G . PASS END=110032633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 110032634 . A . PASS END=110032719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 110032720 . T . PASS END=110032724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 110032725 . C . PASS END=110032748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 110032749 . C . PASS END=110032750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 110032893 . T . PASS END=110032899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 110032900 . C . PASS END=110033001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1109:0,80,255:37,0 chr1 110033002 . C . PASS END=110033003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr1 110033004 . C . PASS END=110033004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 110033005 . A . PASS END=110033014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,81,255:26,0 chr1 110033544 . G . PASS END=110033563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 110033564 . A . PASS END=110033565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 110033566 . C . PASS END=110033569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110033570 . C . PASS END=110033580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:16,0 chr1 110033581 . G . PASS END=110033581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 110033582 . T . PASS END=110033584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 110033585 . A . PASS END=110033585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 110033586 . C . PASS END=110033586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 110033587 . T . PASS END=110033587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 110033588 . C . PASS END=110033591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 110033592 . G . PASS END=110033592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 110033593 . T . PASS END=110033599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 110033600 . C . PASS END=110033600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 110033601 . T . PASS END=110033605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 110033606 . T . PASS END=110033621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 110033622 . A . PASS END=110033622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 110033623 . G . PASS END=110033633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 110033634 . C . PASS END=110033634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 110033635 . C . PASS END=110033665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 110033666 . G . PASS END=110033668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110033669 . C . PASS END=110033701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 110033702 . T . PASS END=110033751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,266:0,27,255:9,0 chr1 110033752 . G . PASS END=110033761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 110033762 . T . PASS END=110033762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 110033763 . G . PASS END=110033763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110033764 . G . PASS END=110033765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 110033766 . C . PASS END=110033779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 110033780 . T . PASS END=110033781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 110033782 . A . PASS END=110033800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 110033801 . A . PASS END=110033801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:9,0 chr1 110033802 . C . PASS END=110033822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 110033823 . C . PASS END=110033823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 110033824 . A . PASS END=110033824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 110033825 . A . PASS END=110033825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 110033826 . G . PASS END=110033841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr1 110033842 . G . PASS END=110033862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 110033863 . A . PASS END=110033864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110033865 . G . PASS END=110033911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 110033912 . C . PASS END=110033912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 110033913 . T . PASS END=110033958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:17:0,46,627:0,46,255:19,0 chr1 110033959 . A . PASS END=110033959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 110033960 . A . PASS END=110033960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110033961 . A . PASS END=110033961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 110033962 . G . PASS END=110033969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 110033970 . C . PASS END=110033970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 110033971 . T . PASS END=110033984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 110033985 . C . PASS END=110033993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 110033994 . C . PASS END=110034002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,550:0,45,255:17,0 chr1 110034003 . A . PASS END=110034003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:16,0 chr1 110034004 . A . PASS END=110034018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,668:0,51,255:19,0 chr1 110034019 . G . PASS END=110034020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 110034021 . G . PASS END=110034021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 110034022 . C . PASS END=110034038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:24,0 chr1 110034039 . G . PASS END=110034039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 110034040 . C . PASS END=110034052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,884:0,72,255:24,0 chr1 110034053 . G . PASS END=110034054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 110034055 . G . PASS END=110034058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110034059 . G . PASS END=110034067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 110034068 . A . PASS END=110034068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:16,0 chr1 110034069 . C . PASS END=110034077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 110034078 . C . PASS END=110034078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:18,0 chr1 110034079 . T . PASS END=110034079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 110034080 . C . PASS END=110034080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr1 110034081 . C . PASS END=110034088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 110034089 . A . PASS END=110034089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 110034090 . G . PASS END=110034103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,884:0,69,255:24,0 chr1 110034104 . T . PASS END=110034104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 110034105 . C . PASS END=110034107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 110034108 . G . PASS END=110034108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 110034109 . G . PASS END=110034135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,878:0,62,255:26,0 chr1 110034136 . G . PASS END=110034139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 110034140 . G . PASS END=110034141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110034142 . C . PASS END=110034142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 110034143 . A . PASS END=110034150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:27:0,66,990:0,68,255:25,0 chr1 110034151 . A . PASS END=110034151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,869:0,34,255:19,0 chr1 110034152 . A . PASS END=110034155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 110034156 . C . PASS END=110034156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 110034157 . C . PASS END=110034166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 110034167 . A . PASS END=110034167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:20,0 chr1 110034168 . C . PASS END=110034169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 110034170 . G . PASS END=110034195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:19:0,49,684:0,49,255:19,0 chr1 110034196 . A . PASS END=110034209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 110034210 . G . PASS END=110034243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:18,0 chr1 110034244 . T . PASS END=110034261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 110034262 . G . PASS END=110034339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,501:0,45,255:19,0 chr1 110034649 . G . PASS END=110034653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 110034654 . G . PASS END=110034658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 110034659 . T . PASS END=110034660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110034661 . C . PASS END=110034663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110034664 . C . PASS END=110034664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr1 110034665 . T . PASS END=110034690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 110035208 . T . PASS END=110035211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 110035212 . A . PASS END=110035212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 110035213 . A . PASS END=110035222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 110036523 . A . PASS END=110036529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,857:0,78,255:26,0 chr1 110036530 . T . PASS END=110036538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr1 110036539 . A . PASS END=110036539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 110036540 . A . PASS END=110036542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110036543 . G . PASS END=110036551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 110036552 . C . PASS END=110036566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:28,0 chr1 110036567 . C . PASS END=110036603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,858:0,67,255:25,0 chr1 110036604 . T . PASS END=110036606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:20,1 chr1 110036607 . C . PASS END=110036618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 110036619 . A . PASS END=110036619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 110036620 . G . PASS END=110036620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 110036621 . A . PASS END=110036621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 110036622 . G . PASS END=110036623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 110036624 . G . PASS END=110036625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 110036626 . G . PASS END=110036626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110036627 . C . PASS END=110036627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr1 110036628 . T . PASS END=110036647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:23,0 chr1 110036648 . T . PASS END=110036648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 110036649 . G . PASS END=110036650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 110036651 . C . PASS END=110036651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,745:0,22,255:20,0 chr1 110036652 . G . PASS END=110036653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 110036654 . C . PASS END=110036654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 110036655 . G . PASS END=110036660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 110036661 . C . PASS END=110036663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 110036664 . G . PASS END=110036669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,986:0,67,255:26,0 chr1 110036670 . G . PASS END=110036670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,889:0,34,255:21,0 chr1 110036671 . A . PASS END=110036678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:24,0 chr1 110036679 . C . PASS END=110036680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:25:0,48,853:0,48,255:22,0 chr1 110036681 . G . PASS END=110036690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 110036691 . C . PASS END=110036691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 110036692 . C . PASS END=110036694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 110036695 . C . PASS END=110036695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 110036696 . T . PASS END=110036696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:21,0 chr1 110036697 . C . PASS END=110036697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 110036698 . C . PASS END=110036698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr1 110036699 . G . PASS END=110036705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 110036706 . C . PASS END=110036706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:6:24:0,6,649:0,6,255:19,0 chr1 110036707 . A . PASS END=110036708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110036709 . A . PASS END=110036709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,632:0,38,255:20,0 chr1 110036710 . C . PASS END=110036710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110036711 . C . PASS END=110036711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 110036712 . C . PASS END=110036712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 110036713 . G . PASS END=110036713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,687:0,52,255:21,0 chr1 110036714 . G . PASS END=110036714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,68,255:22,0 chr1 110036715 . A . PASS END=110036716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,638:0,36,255:20,0 chr1 110036717 . G . PASS END=110036717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 110036718 . A . LowGQ END=110036719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:22:0,0,559:0,0,255:18,0 chr1 110036720 . G . PASS END=110036721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 110036722 . G . PASS END=110036722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr1 110036723 . T . PASS END=110036723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:20,0 chr1 110036724 . T . PASS END=110036724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,711:0,66,255:22,0 chr1 110036725 . C . PASS END=110036725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,570:0,10,255:20,0 chr1 110036726 . G . PASS END=110036726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 110036727 . G . PASS END=110036729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr1 110036730 . A . PASS END=110036730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,576:0,16,255:19,0 chr1 110036731 . G . PASS END=110036731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 110036732 . C . LowGQ END=110036732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,582:20,0,255:18,0 chr1 110036733 . T . PASS END=110036733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110036734 . G . PASS END=110036734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,801:0,36,255:22,0 chr1 110036735 . G . PASS END=110036735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:22,0 chr1 110036736 . A . PASS END=110036736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:11:25:0,11,625:0,11,255:20,0 chr1 110036737 . G . PASS END=110036740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,922:0,62,255:23,0 chr1 110036741 . A . PASS END=110036741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:21,0 chr1 110036742 . C . LowGQ END=110036742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,6:27:0:27:0,0,677:18,0,255:18,0 chr1 110036743 . G . PASS END=110036747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,894:0,64,255:24,0 chr1 110036748 . C . PASS END=110036748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,746:0,55,255:22,0 chr1 110036749 . G . PASS END=110036749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 110036750 . C . PASS END=110036750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,701:0,39,255:21,0 chr1 110036751 . G . PASS END=110036752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 110036753 . G . PASS END=110036753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:20,0 chr1 110036754 . C . PASS END=110036758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 110036759 . G . PASS END=110036759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 110036760 . C . PASS END=110036767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 110036768 . C . PASS END=110036780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 110036781 . G . PASS END=110036781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110036782 . T . PASS END=110036830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,529:0,45,255:19,0 chr1 110036831 . A . PASS END=110036889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 110036890 . G . PASS END=110036893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110036894 . T . PASS END=110036894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 110036895 . C . PASS END=110036909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 110037765 . G . PASS END=110037800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,200,255:40,0 chr1 110037801 . C . PASS END=110037802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,216,255:40,0 chr1 110038301 . G . PASS END=110038302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 110038303 . T . PASS END=110038303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 110038304 . G . PASS END=110038310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1180:0,93,255:33,0 chr1 110038311 . A . PASS END=110038311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,929:0,33,255:29,0 chr1 110038312 . G . PASS END=110038314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1166:0,99,255:33,0 chr1 110038315 . C . PASS END=110038315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,900:0,65,255:31,0 chr1 110038316 . C . PASS END=110038320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1081:0,82,255:33,0 chr1 110038321 . T . PASS END=110038321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1132:0,60,255:31,0 chr1 110038322 . T . PASS END=110038375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1223:0,81,255:39,0 chr1 110038376 . A . PASS END=110038376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:33,0 chr1 110038377 . G . PASS END=110038406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:34,0 chr1 110038407 . A . PASS END=110038417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,74,255:26,0 chr1 110038418 . C . PASS END=110038419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr1 110038420 . G . PASS END=110038420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:28,0 chr1 110038421 . A . PASS END=110038425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 110038426 . T . PASS END=110038426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:28,0 chr1 110038427 . C . PASS END=110038435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:32,0 chr1 110038436 . T . PASS END=110038436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 110038437 . C . PASS END=110038440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:31,0 chr1 110038441 . T . PASS END=110038441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:28,0 chr1 110038442 . G . PASS END=110038446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 110038447 . C . PASS END=110038447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr1 110038448 . G . PASS END=110038448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 110038449 . A . PASS END=110038449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:28,0 chr1 110038450 . A . PASS END=110038461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 110038462 . C . PASS END=110038462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:25,0 chr1 110038463 . G . PASS END=110038466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 110038467 . C . PASS END=110038482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 110038483 . A . PASS END=110038499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,71,255:26,0 chr1 110038500 . T . PASS END=110038564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 110038565 . C . PASS END=110038566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110038567 . T . PASS END=110038567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110038568 . G . PASS END=110038583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 110038584 . A . PASS END=110038585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 110038586 . C . PASS END=110038590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110038591 . A . PASS END=110038591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 110038592 . C . PASS END=110038592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 110038593 . A . PASS END=110038593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 110038594 . C . PASS END=110038666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,856:0,61,255:26,0 chr1 110038667 . T . PASS END=110038679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 110038680 . G . PASS END=110038680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110038681 . C . PASS END=110038690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 110038691 . T . PASS END=110038730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,861:0,69,255:26,0 chr1 110038731 . G . PASS END=110038731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 110038732 . G . PASS END=110038733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 110038734 . G . PASS END=110038734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 110038735 . C . PASS END=110038737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 110038738 . C . PASS END=110038752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:19,0 chr1 110038753 . G . PASS END=110038767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 110038768 . C . PASS END=110038777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 110038778 . G . PASS END=110038779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:21,0 chr1 110038780 . G . PASS END=110038782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,690:0,46,255:19,0 chr1 110038783 . G . PASS END=110038807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 110038808 . C . PASS END=110038808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 110038809 . C . PASS END=110038810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 110038811 . T . PASS END=110038811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 110038812 . C . PASS END=110038812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 110038813 . T . PASS END=110038813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 110038814 . A . PASS END=110038814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 110038815 . T . PASS END=110038815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 110038816 . C . PASS END=110038818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 110038819 . G . PASS END=110038819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 110038820 . C . PASS END=110038822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110038823 . T . PASS END=110038823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:20,0 chr1 110038824 . G . PASS END=110038825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 110038826 . T . PASS END=110038826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 110038827 . G . PASS END=110038836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 110038837 . C . PASS END=110038837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 110038838 . A . PASS END=110038842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110038843 . T . PASS END=110038843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:18,0 chr1 110038844 . C . PASS END=110038848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110038849 . T . PASS END=110038849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 110038850 . C . PASS END=110038854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 110038855 . T . PASS END=110038855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 110038856 . T . PASS END=110038869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:21,0 chr1 110038870 . A . PASS END=110038870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 110038871 . T . PASS END=110038872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 110038873 . G . PASS END=110038873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 110038874 . A . PASS END=110038874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 110038875 . A . PASS END=110038881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 110045005 . T . PASS END=110045006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 110045007 . C . PASS END=110045014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1226:0,88,255:32,0 chr1 110050053 . T . PASS END=110050064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,923:0,64,255:26,0 chr1 110050065 . G . PASS END=110050069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1163:0,90,255:30,0 chr1 110050070 . T . PASS END=110050071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 110050072 . T . PASS END=110050075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 110050076 . A . PASS END=110050076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 110050077 . G . PASS END=110050093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1111:0,86,255:34,0 chr1 110050094 . A . PASS END=110050094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1147:0,25,255:32,0 chr1 110050095 . T . PASS END=110050141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1241:0,89,255:35,0 chr1 110050142 . C . PASS END=110050142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr1 110050143 . T . PASS END=110050155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 110050156 . C . PASS END=110050158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 110050159 . G . PASS END=110050162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110050163 . T . PASS END=110050166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 110050167 . C . PASS END=110050169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 110050170 . G . PASS END=110050172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110050173 . G . PASS END=110050175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 110050176 . T . PASS END=110050176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 110050177 . T . PASS END=110050264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1190:0,80,255:36,0 chr1 110050265 . T . PASS END=110050265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 110050266 . G . PASS END=110050281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1194:0,83,255:31,0 chr1 110050282 . A . PASS END=110050282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 110050283 . T . PASS END=110050289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1133:0,93,255:31,0 chr1 110050290 . G . PASS END=110050290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 110050291 . C . PASS END=110050376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1125:0,80,255:33,0 chr1 110050377 . C . PASS END=110050377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 110050378 . A . PASS END=110050396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 110050397 . A . PASS END=110050397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 110050398 . G . PASS END=110050400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110050401 . C . PASS END=110050402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110050403 . C . PASS END=110050406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 110050407 . G . PASS END=110050409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 110050410 . G . PASS END=110050736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:30:0,81,1215:0,89,255:40,0 chr1 110050737 . A . PASS END=110050737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr1 110050738 . C . PASS END=110050763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:29,0 chr1 110050764 . C . PASS END=110050775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr1 110050776 . G . PASS END=110050778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 110050779 . G . PASS END=110050801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,917:0,75,255:26,0 chr1 110050802 . T . PASS END=110050805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 110050806 . G . PASS END=110050821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 110050822 . T . PASS END=110050822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:23,0 chr1 110050823 . A . PASS END=110050825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 110050826 . G . PASS END=110050826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 110050827 . C . PASS END=110050832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 110050833 . T . PASS END=110050835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110050836 . A . PASS END=110050838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110050839 . C . PASS END=110050855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 110050856 . A . PASS END=110050856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 110050857 . G . PASS END=110050860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 110050861 . C . PASS END=110050862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 110050863 . G . PASS END=110050866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:30,0 chr1 110050867 . A . PASS END=110050867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr1 110050868 . G . PASS END=110050876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 110050877 . T . PASS END=110050883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1039:0,71,255:26,0 chr1 110050884 . G . PASS END=110050913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1127:0,87,255:31,0 chr1 110050914 . C . PASS END=110050914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 110050915 . T . PASS END=110050954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1125:0,80,255:34,0 chr1 110050955 . A . PASS END=110050955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:30,0 chr1 110050956 . A . PASS END=110051021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1055:0,88,255:35,0 chr1 110051022 . A . PASS END=110051022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 110051023 . G . PASS END=110051030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110051031 . G . PASS END=110051031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr1 110051032 . T . PASS END=110051045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 110051046 . G . PASS END=110051046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 110051047 . A . PASS END=110051063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1049:0,80,255:30,0 chr1 110051064 . C . PASS END=110051074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,77,255:26,0 chr1 110051075 . A . PASS END=110051081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:27,0 chr1 110051082 . C . PASS END=110051120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,65,255:26,0 chr1 110051121 . C . PASS END=110051123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,59,255:19,0 chr1 110051124 . C . PASS END=110051133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,945:0,62,255:23,0 chr1 110051134 . T . PASS END=110051134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 110051135 . G . PASS END=110051136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 110051137 . A . PASS END=110051137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 110051138 . G . PASS END=110051139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 110051140 . T . PASS END=110051141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 110051142 . A . PASS END=110051145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:25,0 chr1 110051146 . A . PASS END=110051146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 110051147 . A . PASS END=110051148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr1 110051149 . A . PASS END=110051149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 110051150 . G . PASS END=110051153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 110051154 . C . PASS END=110051158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110051159 . C . PASS END=110051161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:26,0 chr1 110051162 . G . PASS END=110051171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 110051172 . C . PASS END=110051173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110051174 . G . PASS END=110051183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 110051184 . G . PASS END=110051185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 110051186 . G . PASS END=110051186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 110051187 . G . PASS END=110051192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:73:30:0,73,964:0,73,255:26,0 chr1 110051193 . G . PASS END=110051195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 110051196 . G . PASS END=110051196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 110051197 . C . PASS END=110051197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110051198 . G . PASS END=110051198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:24,0 chr1 110051199 . C . PASS END=110051205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1016:0,71,255:28,0 chr1 110051206 . G . PASS END=110051214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1145:0,80,255:29,0 chr1 110051215 . G . PASS END=110051218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1054:0,74,255:26,0 chr1 110051219 . A . PASS END=110051222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 110051223 . C . PASS END=110051223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 110051224 . T . PASS END=110051225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 110051226 . A . PASS END=110051226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:28,0 chr1 110051227 . G . PASS END=110051234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1013:0,90,255:30,0 chr1 110051235 . G . PASS END=110051235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:23:30:0,23,823:0,23,255:26,0 chr1 110051236 . A . PASS END=110051237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:30,0 chr1 110051238 . G . LowGQ END=110051238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,6:30:0:30:0,0,734:24,0,255:24,0 chr1 110051239 . T . PASS END=110051239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:23:30:0,23,768:0,23,255:26,0 chr1 110051240 . T . PASS END=110051240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,850:0,56,255:28,0 chr1 110051241 . C . PASS END=110051242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 110051243 . G . PASS END=110051243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:10:31:0,10,806:0,10,255:25,0 chr1 110051244 . G . PASS END=110051244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,964:0,46,255:28,0 chr1 110051245 . T . PASS END=110051245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 110051246 . G . PASS END=110051246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 110051247 . G . PASS END=110051289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:34,0 chr1 110051290 . G . PASS END=110051290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 110051291 . G . PASS END=110051299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:28,0 chr1 110051300 . C . PASS END=110051300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 110051301 . G . PASS END=110051323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,1063:0,80,255:31,0 chr1 110051324 . T . PASS END=110051324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:29,0 chr1 110051325 . G . PASS END=110051329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 110051330 . T . PASS END=110051330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr1 110051331 . G . PASS END=110051343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 110051344 . G . PASS END=110051346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:24,0 chr1 110051347 . G . PASS END=110051458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1094:0,86,255:38,0 chr1 110051459 . T . PASS END=110051459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr1 110051460 . G . PASS END=110051509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:31:0,83,1136:0,83,255:35,0 chr1 110051510 . C . PASS END=110051510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 110051511 . T . PASS END=110051517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:28,0 chr1 110051518 . T . PASS END=110051518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 110051519 . C . PASS END=110051519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110051520 . A . PASS END=110051520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr1 110051521 . C . PASS END=110051532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,68,255:26,0 chr1 110051533 . A . PASS END=110051534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:27:0,57,855:0,68,255:19,0 chr1 110085645 . A . PASS END=110085649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,895:0,78,255:26,0 chr1 110085650 . G . PASS END=110085662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:30,0 chr1 110085663 . C . PASS END=110085663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr1 110085664 . C . PASS END=110085669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 110085670 . C . PASS END=110085670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 110085671 . A . PASS END=110085680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 110085681 . T . PASS END=110085681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,956:0,56,255:28,0 chr1 110085682 . C . PASS END=110085683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 110085684 . T . PASS END=110085684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 110085685 . C . PASS END=110085689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr1 110085690 . T . PASS END=110085690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 110085691 . T . PASS END=110085697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 110085698 . G . PASS END=110085698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 110085699 . G . PASS END=110085724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1111:0,90,255:31,0 chr1 110085725 . T . PASS END=110085725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:30,0 chr1 110085726 . G . PASS END=110085730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:32,0 chr1 110085731 . T . PASS END=110085731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 110085732 . G . PASS END=110085735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:30,0 chr1 110085736 . T . PASS END=110085736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr1 110085737 . C . PASS END=110085756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:32:0,85,1166:0,85,255:32,0 chr1 110085757 . A . PASS END=110085757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1119:0,71,255:30,0 chr1 110085758 . T . PASS END=110085763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 110085764 . T . PASS END=110085764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 110085765 . T . PASS END=110085767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 110085768 . G . PASS END=110085768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:28,0 chr1 110085769 . A . PASS END=110085865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1097:0,80,255:37,0 chr1 110085866 . A . PASS END=110085866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr1 110085867 . A . PASS END=110085919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1194:0,83,255:37,0 chr1 110085920 . C . PASS END=110085920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:30,0 chr1 110085921 . C . PASS END=110085921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 110085922 . T . PASS END=110085922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1218:0,53,255:32,0 chr1 110085923 . C . PASS END=110085957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:35:0,87,1305:0,88,255:38,0 chr1 110085958 . T . PASS END=110085971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:27:0,71,1024:0,71,255:26,0 chr1 110085972 . T . PASS END=110085972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:22,0 chr1 110085973 . T . PASS END=110086000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,902:0,64,255:26,0 chr1 110086001 . G . PASS END=110086002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 110086003 . T . PASS END=110086006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110086007 . G . PASS END=110086015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 110086016 . C . PASS END=110086016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 110086017 . T . PASS END=110086032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 110086033 . T . PASS END=110086033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110086034 . C . PASS END=110086035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 110086036 . T . PASS END=110086036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,968:0,70,255:27,0 chr1 110086037 . C . PASS END=110086037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110086038 . T . PASS END=110086038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110086039 . C . PASS END=110086049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 110086050 . A . PASS END=110086051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 110086052 . C . PASS END=110086052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:27,0 chr1 110086053 . A . PASS END=110086053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 110086054 . A . PASS END=110086054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110086055 . T . PASS END=110086055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,952:0,68,255:26,0 chr1 110086056 . G . PASS END=110086058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110086059 . G . PASS END=110086074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,65,255:25,0 chr1 110086075 . T . PASS END=110086079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 110086080 . C . PASS END=110086080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:14,0 chr1 110086081 . A . PASS END=110086086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:16,0 chr1 110086087 . T . PASS END=110086090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,57,255:13,0 chr1 110086091 . C . PASS END=110086093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:14,0 chr1 110086094 . C . PASS END=110086094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 110086095 . G . PASS END=110086103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110086104 . A . PASS END=110086104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 110086105 . T . PASS END=110086105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110086106 . G . PASS END=110086106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110086107 . A . PASS END=110086107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 110086108 . C . PASS END=110086108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 110086109 . G . PASS END=110086109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110086110 . C . PASS END=110086119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 110086120 . T . PASS END=110086120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 110086121 . G . PASS END=110086122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 110086123 . C . PASS END=110086125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 110086126 . C . PASS END=110086129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110086130 . G . PASS END=110086133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 110086134 . G . PASS END=110086134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 110086135 . T . PASS END=110086145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 110086146 . G . PASS END=110086153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:24,0 chr1 110086154 . C . PASS END=110086154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:23,0 chr1 110086155 . T . PASS END=110086160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:25,0 chr1 110086161 . A . PASS END=110086161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 110086162 . T . PASS END=110086169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 110086170 . G . PASS END=110086173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 110086174 . C . PASS END=110086175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 110086176 . G . PASS END=110086176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110086177 . T . PASS END=110086177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 110086178 . G . PASS END=110086296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1094:0,86,255:40,0 chr1 110086297 . T . PASS END=110086297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:35,0 chr1 110086298 . G . PASS END=110086328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:33:0,80,1194:0,80,255:36,0 chr1 110086329 . T . PASS END=110086329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:28,0 chr1 110086330 . G . PASS END=110086334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 110086335 . A . PASS END=110086336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 110086337 . G . PASS END=110086348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 110086349 . C . PASS END=110086349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 110086350 . C . PASS END=110086354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110086355 . G . PASS END=110086363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,70,255:26,0 chr1 110086364 . G . PASS END=110086405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 110086406 . A . PASS END=110086412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110086413 . G . PASS END=110086413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr1 110086414 . A . PASS END=110086426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 110086427 . C . PASS END=110086431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:12:0,22,405:0,22,255:9,0 chr1 110086432 . C . PASS END=110086435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 110086436 . G . PASS END=110086450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 110086451 . G A, 77.11 PASS DP=10;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,2,0:0,8,0:27:115,30,0,385,30,385:255,30,0:0,0:7.7105e+01,2.7105e+01,8.4688e-03,3.8232e+02,6.1875e+01,3.8532e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,5:0,0,5,5 chr1 110086452 . G . PASS END=110086457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 110086458 . C . PASS END=110086458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 110086459 . C . PASS END=110086459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 110086460 . C . PASS END=110086466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 110086467 . A . PASS END=110086478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,507:0,42,255:17,0 chr1 110086479 . A . PASS END=110086479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 110086480 . C . PASS END=110086481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110086482 . T . PASS END=110086482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,443:0,18,255:15,0 chr1 110086483 . T . PASS END=110086488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 110086489 . G . PASS END=110086506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,653:0,51,255:19,0 chr1 110086507 . T . PASS END=110086521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 110086522 . G . PASS END=110086522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 110086523 . G . PASS END=110086527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 110086528 . A . PASS END=110086528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 110086529 . G . PASS END=110086530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 110086531 . T . PASS END=110086531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 110086532 . C . PASS END=110086545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,735:0,60,255:22,0 chr1 110086546 . T . PASS END=110086546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 110086547 . G . PASS END=110086551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:24,0 chr1 110086552 . A . PASS END=110086552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 110086553 . C . PASS END=110086591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,856:0,65,255:26,0 chr1 110086592 . C . PASS END=110086592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 110086593 . A . PASS END=110086594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 110086595 . T . PASS END=110086596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 110086597 . C . PASS END=110086604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,921:0,62,255:25,0 chr1 110086605 . C . PASS END=110086605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:24,0 chr1 110086606 . A . PASS END=110086622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,939:0,67,255:25,0 chr1 110086623 . A . PASS END=110086623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:22,0 chr1 110086624 . C . PASS END=110086626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:24,0 chr1 110086627 . G . PASS END=110086627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 110086628 . G . PASS END=110086630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 110086631 . T . PASS END=110086631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 110086632 . G . PASS END=110086639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 110086640 . T . PASS END=110086640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 110086641 . T . PASS END=110086644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110086645 . T . PASS END=110086655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 110086656 . C . PASS END=110086658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 110086659 . T . PASS END=110086686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 110086687 . T . PASS END=110086687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110086688 . C . PASS END=110086688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 110086689 . C . PASS END=110086709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 110086710 . T . PASS END=110086710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 110086711 . T . PASS END=110086711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 110086712 . T . PASS END=110086712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 110086713 . G . PASS END=110086717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 110086718 . C . PASS END=110086718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 110086719 . T . PASS END=110086719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 110086720 . T . PASS END=110086720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,782:0,38,255:22,0 chr1 110086721 . C . PASS END=110086722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 110086723 . T . PASS END=110086723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 110086724 . C . PASS END=110086737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:24,0 chr1 110086738 . A . PASS END=110086742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,836:0,53,255:19,0 chr1 110086743 . G . PASS END=110086751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 110086752 . C . PASS END=110086791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,476:0,45,255:18,0 chr1 110086792 . A . PASS END=110086792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 110086793 . G . PASS END=110086794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,475:0,45,255:15,0 chr1 110086795 . T . PASS END=110086795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 110086796 . C . PASS END=110086798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 110086799 . T . PASS END=110086799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 110086800 . C . PASS END=110086826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 110086827 . T . PASS END=110086830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 110086831 . T . PASS END=110086836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 110086837 . G . PASS END=110086848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 110086849 . G . PASS END=110086851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110086852 . C . PASS END=110086859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110086860 . G . PASS END=110086898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,560:0,45,255:18,0 chr1 110086899 . G . PASS END=110086940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:26,0 chr1 110086941 . G . PASS END=110086941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 110086942 . A . PASS END=110086956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,931:0,78,255:26,0 chr1 110086957 . A . PASS END=110086957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,809:0,39,255:23,0 chr1 110086958 . C . PASS END=110086979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 110086980 . T . PASS END=110086980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 110086981 . C . PASS END=110086997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 110086998 . T . PASS END=110086998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 110086999 . G . PASS END=110087000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 110091343 . A . PASS END=110091343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110091344 . T . PASS END=110091344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110091345 . G . PASS END=110091345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 110091346 . G . PASS END=110091353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:26,0 chr1 110091354 . G . PASS END=110091354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 110091355 . T . PASS END=110091355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:26,0 chr1 110091356 . T . PASS END=110091358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 110091359 . G . PASS END=110091359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 110091360 . C . PASS END=110091379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:31,0 chr1 110091380 . T . PASS END=110091381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:30,0 chr1 110091382 . G . PASS END=110091383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 110091384 . G . PASS END=110091384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 110091385 . C . PASS END=110091460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1255:0,86,255:36,0 chr1 110116359 . G . PASS END=110116401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,200,255:40,0 chr1 110116518 . A . PASS END=110116659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:55:0,120,1800:0,148,255:40,1 chr1 110121826 . G . PASS END=110121983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:36:0,80,1191:0,80,255:40,0 chr1 110125059 . T . PASS END=110125187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:34:0,86,1251:0,86,255:40,0 chr1 110128838 . G . PASS END=110128967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:50:0,99,1485:0,132,255:40,0 chr1 110129351 . A . PASS END=110129504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:53:0,111,1665:0,129,255:40,0 chr1 110134665 . G . PASS END=110134668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 110134669 . C . PASS END=110134855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:28:0,80,1177:0,80,255:40,0 chr1 110145874 . G . PASS END=110145874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,211,255:40,0 chr1 110145926 . C . PASS END=110145926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,229,255:40,0 chr1 110145976 . T . PASS END=110146151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:37:0,81,1215:0,111,255:40,0 chr1 110146152 . C . PASS END=110146166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:24,0 chr1 110146573 . C . PASS END=110146721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:36:0,81,1215:0,92,255:40,0 chr1 110146722 . C . PASS END=110146726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:25,0 chr1 110148587 . C . PASS END=110148587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1225:0,96,255:32,0 chr1 110148590 . A . PASS END=110148590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1241:0,96,255:32,0 chr1 110148592 . C . PASS END=110148723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1150:0,80,255:40,0 chr1 110148730 . A . PASS END=110148730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1312:0,105,255:35,0 chr1 110148930 . C . PASS END=110149029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:37:0,89,1482:0,89,255:40,0 chr1 110149030 . C . PASS END=110149030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:31,0 chr1 110149031 . T . PASS END=110149054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:33,0 chr1 110149055 . G . PASS END=110149058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:26,0 chr1 110150278 . A . PASS END=110150278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,145,255:40,0 chr1 110151243 . T . PASS END=110151243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:24,0 chr1 110151253 . T . PASS END=110151357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:82:31:0,82,1106:0,82,255:40,0 chr1 110151358 . A . PASS END=110151394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:37:0,93,1395:0,104,255:40,0 chr1 110151395 . G T, 42.79 PASS DP=37;MQ=250.00;MQRankSum=4.947;ReadPosRankSum=3.356;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,13,0:0.351,0.000:37:11,9,0:13,4,0:42:78,0,50,457,853,1310:255,0,255:19,0:4.2791e+01,2.5007e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,13,5,8:8,16,5,8 chr1 110151396 . C . PASS END=110151405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:30,0 chr1 110151406 . T . PASS END=110151410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr1 110152662 . C . PASS END=110152669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:30:0,82,1149:0,82,255:31,0 chr1 110152670 . T . PASS END=110152670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:30,0 chr1 110152671 . T . PASS END=110152803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:33:0,92,1258:0,92,255:40,0 chr1 110153087 . T . PASS END=110153129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,105,1575:0,120,255:40,0 chr1 110155370 . C . PASS END=110155370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 110155375 . C . PASS END=110155492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,150,255:40,0 chr1 110155580 . G . PASS END=110155580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 110155623 . C . PASS END=110155623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,105,1575:0,132,255:35,0 chr1 110162891 . A . PASS END=110162900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,576:0,41,255:19,0 chr1 110163636 . A . PASS END=110163677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:12,0 chr1 110163678 . T . PASS END=110163683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 110163684 . C . PASS END=110163687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 110163688 . A . PASS END=110163688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 110163689 . T . PASS END=110163698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 110163699 . C . PASS END=110163705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 110163706 . G . PASS END=110163715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr1 110163716 . G . PASS END=110163716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 110163717 . A . PASS END=110163727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:13,0 chr1 110163728 . G . PASS END=110163739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 110163740 . G . PASS END=110163740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110163741 . C . PASS END=110163797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:17,0 chr1 110163798 . A . PASS END=110163798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 110163799 . T . PASS END=110163804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 110163805 . C . PASS END=110163816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 110163817 . G . PASS END=110163817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 110163818 . C . PASS END=110163818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 110163819 . T . PASS END=110163819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 110163820 . C . PASS END=110163841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:12,0 chr1 110163842 . T . PASS END=110163865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 110163866 . G . PASS END=110163878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 110163879 . G A, 50.00 PASS DP=10;MQ=250.00;MQRankSum=2.450;ReadPosRankSum=0.470;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,5,0:0.500,0.000:10:1,2,0:4,3,0:47:85,0,47,179,179,358:164,0,164:5,0:5.0000e+01,8.6978e-05,4.9990e+01,1.7884e+02,2.1359e+02,3.6066e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,1,4:4,1,4,1 chr1 110163880 . C . PASS END=110163888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 110164807 . A . PASS END=110164824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 110164825 . C . PASS END=110164852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 110164853 . C . PASS END=110164853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr1 110164854 . A . PASS END=110164864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 110164865 . A . PASS END=110164865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 110164866 . T . PASS END=110164870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 110164871 . A . PASS END=110164871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 110164872 . A . PASS END=110164872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 110164873 . A . PASS END=110164884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 110164885 . G . PASS END=110164889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 110164890 . G . PASS END=110164925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 110164926 . C . PASS END=110164939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 110164940 . C . PASS END=110164940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110164941 . T . PASS END=110164941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 110164942 . A . PASS END=110164943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110166601 . C . PASS END=110166601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 110166602 . T . PASS END=110166602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110166603 . G . PASS END=110166603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 110166604 . C . PASS END=110166612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 110166613 . C . PASS END=110166630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 110166631 . G . PASS END=110166632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110167925 . A . PASS END=110167926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 110167927 . G . PASS END=110167931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 110167932 . G . PASS END=110167932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 110167933 . G . PASS END=110167945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 110167946 . C . PASS END=110167946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 110167947 . C . PASS END=110167952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:26,0 chr1 110167953 . G . PASS END=110167953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 110167954 . C . PASS END=110167960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 110167961 . C . PASS END=110167963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:29,0 chr1 110167964 . C . PASS END=110167964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 110167965 . C . PASS END=110167967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 110167968 . A . PASS END=110167968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 110167969 . T . PASS END=110167969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 110167970 . C . PASS END=110167970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 110167971 . C . PASS END=110167981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1227:0,93,255:34,0 chr1 110167982 . C . PASS END=110167982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:33,0 chr1 110167983 . C . PASS END=110168046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1217:0,80,255:36,0 chr1 110168047 . A . PASS END=110168047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1098:0,68,255:30,0 chr1 110168048 . T . PASS END=110168055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:31,0 chr1 110168257 . A . PASS END=110168261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 110168262 . G . PASS END=110168282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 110168283 . G . PASS END=110168303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 110168304 . G . PASS END=110168312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 110168313 . C . PASS END=110168318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110168319 . C . PASS END=110168326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 110168327 . C . PASS END=110168328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110168329 . C . PASS END=110168353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,435:0,33,255:13,0 chr1 110168354 . C . PASS END=110168354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 110168355 . C . PASS END=110168370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 110168371 . G . PASS END=110168378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110168379 . G . PASS END=110168379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 110168380 . C . PASS END=110168414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,449:0,36,255:13,0 chr1 110168782 . G . PASS END=110168792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,868:0,69,255:24,0 chr1 110168793 . A . PASS END=110168793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr1 110168794 . C . PASS END=110168797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 110168798 . C . PASS END=110168798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 110168799 . T . PASS END=110168822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,870:0,75,255:25,0 chr1 110168823 . T . PASS END=110168823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 110168824 . G . PASS END=110168841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,886:0,75,255:25,0 chr1 110168842 . G . PASS END=110168850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr1 110168941 . G . PASS END=110168980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,668:0,41,255:19,0 chr1 110168981 . C . PASS END=110168992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 110168993 . G . PASS END=110169040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 110169041 . A . PASS END=110169045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:12,0 chr1 110169046 . T . PASS END=110169046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 110169047 . G . PASS END=110169049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 110169051 . T . PASS END=110169051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:8,0 chr1 110169348 . G . PASS END=110169354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 110169355 . T . PASS END=110169360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 110169361 . A . PASS END=110169370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 110169371 . T . PASS END=110169371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 110169372 . G . PASS END=110169385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 110169386 . G . PASS END=110169391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 110169392 . G . PASS END=110169392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:9,0 chr1 110169393 . G . PASS END=110169393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 110169394 . C . LowGQ END=110169401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:10:0,0,286:6,0,255:10,0 chr1 110169402 . A . PASS END=110169403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 110169404 . C . LowGQ END=110169404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 110169405 . C . PASS END=110169405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 110169406 . G . LowGQ END=110169406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:9,0 chr1 110169407 . G . PASS END=110169407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 110169408 . G . LowGQ END=110169412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,341:3,0,255:10,0 chr1 110169413 . G . PASS END=110169413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 110169414 . T . PASS END=110169415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,496:0,6,255:13,0 chr1 110169416 . C . PASS END=110169448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 110169449 . C . PASS END=110169461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 110169462 . C . PASS END=110169510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 110169511 . G . LowGQ END=110169511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 110169512 . C . PASS END=110169521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 110169522 . C . PASS END=110169534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 110169797 . A . PASS END=110169832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:19,0 chr1 110169833 . C . PASS END=110169839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110169840 . G . PASS END=110169887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:15:0,44,529:0,44,255:19,0 chr1 110169888 . C . PASS END=110169888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 110169889 . A . PASS END=110169919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,560:0,48,255:17,0 chr1 110169920 . G . PASS END=110169938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 110170051 . T . PASS END=110170098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1009:0,84,255:31,0 chr1 110170099 . T . PASS END=110170099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 110170100 . G . PASS END=110170125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1040:0,90,255:31,0 chr1 110170126 . T . PASS END=110170126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:26,0 chr1 110170127 . A . PASS END=110170134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 110170135 . C . PASS END=110170140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1100:0,74,255:26,0 chr1 110170396 . A . PASS END=110170396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr1 110170397 . A . PASS END=110170405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 110170406 . T . PASS END=110170407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,790:0,53,255:22,0 chr1 110170408 . C . PASS END=110170420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 110170421 . C . PASS END=110170423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 110170424 . T . PASS END=110170424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr1 110170425 . A . PASS END=110170436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1186:0,83,255:32,0 chr1 110170437 . A . PASS END=110170437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:28,0 chr1 110170438 . G . PASS END=110170444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 110170445 . A . PASS END=110170445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 110170446 . T . PASS END=110170453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1107:0,80,255:29,0 chr1 110170454 . C . PASS END=110170454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:27,0 chr1 110170455 . T . PASS END=110170469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:31,0 chr1 110170470 . A . PASS END=110170470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 110170471 . G . PASS END=110170471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,907:0,43,255:28,0 chr1 110170472 . G . PASS END=110170472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,864:0,21,255:28,0 chr1 110170473 . A . PASS END=110170473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 110170474 . G . PASS END=110170474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,897:0,59,255:29,0 chr1 110170475 . C . PASS END=110170475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr1 110170476 . T . PASS END=110170476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1100:0,49,255:30,0 chr1 110170477 . G . PASS END=110170525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1118:0,80,255:33,0 chr1 110170697 . C . PASS END=110170697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 110170705 . G . PASS END=110170705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 110170706 . T . PASS END=110170706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 110170707 . G . PASS END=110170709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 110170710 . C . PASS END=110170710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 110170711 . A . PASS END=110170735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,89,255:35,0 chr1 110170736 . T . PASS END=110170736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:34,0 chr1 110170737 . G . PASS END=110170740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1268:0,105,255:36,0 chr1 110170741 . C . PASS END=110170741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1271:0,61,255:33,0 chr1 110170742 . A . PASS END=110170748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1339:0,95,255:36,0 chr1 110170749 . T . PASS END=110170749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:35,0 chr1 110170750 . C . PASS END=110170753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:35,0 chr1 110170754 . T . PASS END=110170754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:32,0 chr1 110170755 . G . PASS END=110170787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1186:0,83,255:34,0 chr1 110170788 . G . PASS END=110170788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr1 110170789 . G . PASS END=110170792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:29,0 chr1 110170793 . A . PASS END=110170794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 110170795 . A . PASS END=110170795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,979:0,54,255:26,0 chr1 110170796 . T . PASS END=110170796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:26,0 chr1 110170797 . C . PASS END=110170797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:25,0 chr1 110170798 . G . PASS END=110170798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 110170799 . T . PASS END=110170801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1069:0,71,255:26,0 chr1 110170802 . A . PASS END=110170802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:24,0 chr1 110170803 . C . PASS END=110170806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 110170807 . G . PASS END=110170807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:27,0 chr1 110170808 . A . PASS END=110170808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110170809 . G . PASS END=110170809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 110170810 . C . PASS END=110170827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1125:0,80,255:30,0 chr1 110170828 . C . PASS END=110170829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 110170830 . G . PASS END=110170831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110170832 . G . PASS END=110170837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1078:0,74,255:26,0 chr1 110170838 . T . PASS END=110170839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 110170840 . T . PASS END=110170840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:26,0 chr1 110170841 . T . PASS END=110170849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 110170850 . T . PASS END=110170850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 110170851 . G . PASS END=110170851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110170852 . A . PASS END=110170853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110170854 . T . PASS END=110170854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,906:0,37,255:23,0 chr1 110170855 . C . PASS END=110170858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 110170859 . C . PASS END=110170860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 110170861 . G . PASS END=110170869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 110170870 . C . PASS END=110170882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,77,255:27,0 chr1 110170883 . C . PASS END=110170883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 110170884 . G . PASS END=110170884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 110170885 . C . PASS END=110170895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1210:0,86,255:35,0 chr1 110170896 . T C, 158.35 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,19,0:0,18,0:108:196,111,0,1418,111,1418:255,111,0:0,0:1.5835e+02,1.0835e+02,0.0000e+00,4.5000e+02,1.4312e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,17:0,0,16,21 chr1 110170897 . G . PASS END=110170933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:37:0,82,1496:0,82,255:40,0 chr1 110170934 . C . PASS END=110171117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,108,1704:0,108,255:40,0 chr1 110171120 . A . PASS END=110171120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 110171265 . G . PASS END=110171268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 110171269 . T . PASS END=110171269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 110171270 . G . PASS END=110171416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1111:0,87,255:40,0 chr1 110171417 . G . PASS END=110171417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 110171418 . C . PASS END=110171421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 110171422 . G . PASS END=110171422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 110171423 . C . PASS END=110171428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr1 110171731 . T . PASS END=110171731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110171732 . G . PASS END=110171738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr1 110171739 . A . PASS END=110171739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:23,0 chr1 110171740 . C . PASS END=110171742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 110171743 . T . PASS END=110171743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:25,0 chr1 110171744 . A . PASS END=110171763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,981:0,84,255:29,0 chr1 110171764 . C . PASS END=110171769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr1 110171770 . G . PASS END=110171773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:28,0 chr1 110171774 . A . PASS END=110171774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 110171775 . T . PASS END=110171782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1088:0,83,255:33,0 chr1 110171783 . A . PASS END=110171783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:31,0 chr1 110171784 . A . PASS END=110171787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:32,0 chr1 110171788 . C . PASS END=110171788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 110171789 . T . PASS END=110171855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1131:0,80,255:34,0 chr1 110171856 . A . PASS END=110171857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 110171949 . G . PASS END=110171954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 110171955 . G . PASS END=110171957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110171958 . T . PASS END=110171958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110171959 . T . PASS END=110172018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,986:0,80,255:34,0 chr1 110172019 . T . PASS END=110172027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:26,0 chr1 110172028 . C . PASS END=110172029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 110172030 . T . PASS END=110172030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:27,0 chr1 110172031 . G . PASS END=110172038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:31,0 chr1 110172039 . G . PASS END=110172040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 110172041 . G . PASS END=110172042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 110172043 . A . PASS END=110172049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,79,255:26,0 chr1 110172050 . A . PASS END=110172053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr1 110172054 . T . PASS END=110172056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,901:0,75,255:26,0 chr1 110172057 . G . PASS END=110172058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 110172059 . C . PASS END=110172079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:25,0 chr1 110172080 . T . PASS END=110172092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 110172093 . A . PASS END=110172096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110172097 . T . PASS END=110172097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 110172098 . G . PASS END=110172104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 110172105 . C . PASS END=110172112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,637:0,43,255:19,0 chr1 110172418 . G . PASS END=110172424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110172425 . G . PASS END=110172425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 110172426 . G . PASS END=110172427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 110172428 . T . PASS END=110172428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 110172429 . T . PASS END=110172445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,568:0,40,255:19,0 chr1 110172446 . A . PASS END=110172453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:26,0 chr1 110172454 . C . PASS END=110172478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,986:0,81,255:33,0 chr1 110172479 . C . PASS END=110172479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:31,0 chr1 110172480 . A . PASS END=110172500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1208:0,83,255:33,0 chr1 110172501 . T . PASS END=110172501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 110172502 . G . PASS END=110172507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 110172508 . G . PASS END=110172513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 110172514 . T . PASS END=110172514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:25,0 chr1 110172515 . T . PASS END=110172520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 110172521 . G . PASS END=110172521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 110172522 . G . PASS END=110172530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 110172531 . T . PASS END=110172531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 110172532 . G . PASS END=110172535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110172536 . A . PASS END=110172538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 110172855 . G . PASS END=110173011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:30:0,83,1119:0,83,255:40,0 chr1 110173012 . A . PASS END=110173013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:31,0 chr1 110173014 . T . PASS END=110173014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 110173015 . T . PASS END=110173015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:31,0 chr1 110173016 . C . PASS END=110173037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1188:0,85,255:34,0 chr1 110173038 . C . PASS END=110173038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 110173039 . A . PASS END=110173041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 110173042 . A . PASS END=110173042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,936:0,37,255:24,0 chr1 110173043 . G . PASS END=110173048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:25,0 chr1 110173049 . C . PASS END=110173049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,935:0,51,255:24,0 chr1 110173050 . A . LowGQ END=110173050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,790:19,0,255:21,0 chr1 110173051 . G . PASS END=110173052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110173053 . C . PASS END=110173053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:25,0 chr1 110173054 . G . PASS END=110173056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110173057 . C . PASS END=110173057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,892:0,34,255:25,0 chr1 110173058 . G . PASS END=110173060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:26,0 chr1 110173061 . C . PASS END=110173061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:19,0 chr1 110173305 . G . PASS END=110173319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:26,0 chr1 110173320 . G . PASS END=110173389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1016:0,81,255:34,0 chr1 110173390 . T . PASS END=110173393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1102:0,77,255:26,0 chr1 110173394 . C . PASS END=110173409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 110173410 . C . PASS END=110173415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 110173565 . G . PASS END=110173604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr1 110173605 . G . PASS END=110173620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 110173621 . C . PASS END=110173621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 110173622 . A . PASS END=110173637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1057:0,84,255:29,0 chr1 110173638 . T . PASS END=110173638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 110173639 . G . PASS END=110173639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110173640 . C . PASS END=110173640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 110173641 . C . PASS END=110173681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:36,0 chr1 110173682 . G . PASS END=110173703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr1 110173704 . C . PASS END=110173704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 110173705 . A . PASS END=110173728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 110173729 . C . PASS END=110173759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:18,0 chr1 110173760 . C . PASS END=110173760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110173761 . C . PASS END=110173761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110173762 . A . PASS END=110173769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 110173770 . A . PASS END=110173770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 110173771 . A . PASS END=110173774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 110199012 . A . PASS END=110199038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1164:0,83,255:31,0 chr1 110199039 . A . PASS END=110199039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,881:0,70,255:28,0 chr1 110199040 . T . PASS END=110199044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:29,0 chr1 110199045 . G . PASS END=110199047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110199334 . C . PASS END=110199384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1074:0,80,255:32,0 chr1 110199385 . G . PASS END=110199385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:25,0 chr1 110199386 . A . PASS END=110199387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 110199388 . A . PASS END=110199409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,930:0,62,255:26,0 chr1 110199837 . C . PASS END=110199901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:72:0,120,1800:0,122,255:40,0 chr1 110200158 . A . PASS END=110200293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:87:0,120,1800:0,223,255:40,0 chr1 110200394 . G . PASS END=110200494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:54:0,120,1800:0,147,255:40,0 chr1 110201436 . G . PASS END=110201542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:57:0,120,1800:0,141,255:40,0 chr1 110201543 . A . PASS END=110201579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,3:90:99:86:0,120,1800:0,220,255:40,0 chr1 110201580 . C T, 333.62 PASS DP=96;MQ=236.18;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,96,0:1.000,0.000:96:0,50,0:0,46,0:284:371,287,0,3535,287,3535:255,255,0:0,0:3.3362e+02,2.8362e+02,0.0000e+00,4.4853e+02,3.1839e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,56,40:0,0,50,46 chr1 110201581 . G . PASS END=110201617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,255,255:40,0 chr1 110201618 . G . PASS END=110201661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:87:0,120,1800:0,223,255:40,0 chr1 110201662 . T . PASS END=110201698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,183,255:40,0 chr1 110201699 . T C, 268.79 PASS DP=74;MQ=129.37;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,74,0:1.000,0.000:74:0,39,0:0,35,0:219:307,222,0,2779,222,2779:255,222,0:0,0:2.6879e+02,2.1879e+02,0.0000e+00,4.5000e+02,2.5356e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,41,33:0,0,42,32 chr1 110201700 . C . PASS END=110201736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:68:0,120,1800:0,174,255:40,0 chr1 110201737 . T . PASS END=110201767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,156,255:40,0 chr1 110201768 . T . PASS END=110201808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,120,1800:0,149,255:40,0 chr1 110201809 . G T, 195.17 PASS DP=51;MQ=167.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,51,0:1.000,0.000:51:0,26,0:0,25,0:145:233,148,0,333,333,333:255,153,0:0,0:1.9517e+02,1.4517e+02,0.0000e+00,3.2994e+02,3.6471e+02,3.3295e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,38:0,0,24,27:110201809 chr1 110201810 . C . PASS END=110201811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,120,1800:0,129,255:40,0 chr1 110201812 . A G, 175.90 PASS DP=43;MQ=179.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,43,0:1.000,0.000:43:0,20,0:0,23,0:126:214,129,0,314,314,314:255,129,0:0,0:1.7590e+02,1.2590e+02,0.0000e+00,3.1067e+02,3.4544e+02,3.1368e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,32:0,0,22,21:110201809 chr1 110201813 . C . PASS END=110201853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:35:0,90,1350:0,101,255:40,0 chr1 110201854 . C . PASS END=110201861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1302:0,89,255:30,0 chr1 110201862 . T . PASS END=110201862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr1 110201863 . T . PASS END=110201868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 110201869 . G . PASS END=110201880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:26:0,42,630:0,54,255:15,0 chr1 110201881 . T . PASS END=110201881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr1 110201882 . A . PASS END=110201883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 110201884 . C . PASS END=110201884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 110201885 . G . PASS END=110201892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 110201893 . T . PASS END=110201893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,399:0,28,255:14,0 chr1 110201894 . T . PASS END=110201897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 110202412 . T . PASS END=110202581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:93:42:0,93,1480:0,93,255:40,1 chr1 110203787 . G . PASS END=110203876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,158,255:40,0 chr1 110207633 . G . PASS END=110207653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,188,255:40,0 chr1 110210738 . A . PASS END=110210738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,953:0,37,255:25,0 chr1 110210739 . T . PASS END=110210739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 110210740 . G . PASS END=110210740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 110210741 . C . PASS END=110210742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110210743 . C . PASS END=110210743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 110210744 . A . PASS END=110210745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110210746 . G . PASS END=110210746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110210747 . A . PASS END=110210747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 110210748 . C . PASS END=110210749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:25,0 chr1 110210750 . C . PASS END=110210751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:27:0,45,906:0,45,255:25,0 chr1 110210752 . G . PASS END=110210752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110210753 . G . PASS END=110210753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 110210754 . G . PASS END=110210754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110210755 . G . PASS END=110210755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr1 110210756 . T . PASS END=110210756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 110210757 . A . PASS END=110210758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr1 110210759 . T . PASS END=110210759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,945:0,32,255:27,0 chr1 110210760 . G . PASS END=110210760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 110210761 . G . PASS END=110210761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:27,0 chr1 110210762 . A . PASS END=110210762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 110210763 . A . PASS END=110210765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:54:29:0,54,964:0,54,255:28,0 chr1 110210766 . T . PASS END=110210766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 110210767 . C . PASS END=110210768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,969:0,40,255:27,0 chr1 110210769 . G . PASS END=110210769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 110210770 . C . PASS END=110210770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:25,0 chr1 110210771 . G . PASS END=110210771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110210772 . G . PASS END=110210772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 110210773 . G . PASS END=110210773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110211047 . C . PASS END=110211122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:38:0,84,1388:0,84,255:40,0 chr1 110211547 . C . PASS END=110211611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:86:0,120,1800:0,203,255:40,0 chr1 110211912 . C . PASS END=110211993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:70:0,120,1800:0,187,255:40,0 chr1 110212093 . G . PASS END=110212193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,119,1796:0,119,255:40,0 chr1 110213909 . G . PASS END=110214002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:43:0,90,1350:0,99,255:40,1 chr1 110214003 . A . PASS END=110214004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:72:43:0,72,1080:0,129,255:25,0 chr1 110214095 . A . PASS END=110214205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:33:0,82,1341:0,82,255:40,0 chr1 110215825 . G . PASS END=110215839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,132,255:40,0 chr1 110217369 . G . PASS END=110217458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:62:0,120,1800:0,170,255:40,0 chr1 110224431 . C . PASS END=110224439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:77:0,120,1800:0,165,255:40,0 chr1 110230496 . A . LowDepth;LowGQ END=110230531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110230792 . C . LowDepth;LowGQ END=110230867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110231295 . C . LowDepth;LowGQ END=110231359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110231613 . G . LowDepth;LowGQ END=110231751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110231847 . G . LowDepth;LowGQ END=110231947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110232893 . G . LowDepth;LowGQ END=110232988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110233076 . A . LowDepth;LowGQ END=110233120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110233121 . C . LowDepth END=110233139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:3,0 chr1 110233140 . G . PASS END=110233171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 110233172 . A . PASS END=110233186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 110235828 . G . LowDepth;LowGQ END=110235917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110251103 . G . PASS END=110251198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:35:0,88,1219:0,88,255:40,0 chr1 110253241 . A C, 118.29 PASS DP=25;MQ=84.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,16,0:0,9,0:72:156,75,0,937,75,937:255,75,0:0,0:1.1829e+02,7.1787e+01,2.5886e-07,4.5000e+02,1.0656e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,13:0,0,7,18 chr1 110254935 . A . PASS END=110254949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:30,0 chr1 110254950 . G . PASS END=110254950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 110254951 . G . PASS END=110254953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 110254954 . A . PASS END=110254958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 110254959 . G . PASS END=110254960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 110254961 . C . PASS END=110254961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 110254962 . A . PASS END=110254962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr1 110254963 . T . PASS END=110254970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr1 110255240 . C . PASS END=110255241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110255242 . G . PASS END=110255242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 110255243 . G . PASS END=110255267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1058:0,90,255:31,0 chr1 110255268 . A . PASS END=110255268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:27,0 chr1 110255269 . A . PASS END=110255271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 110255272 . C . PASS END=110255272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 110255273 . A . PASS END=110255276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 110255277 . A . PASS END=110255277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 110255278 . C . PASS END=110255278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 110255279 . T . PASS END=110255279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 110255280 . C . PASS END=110255288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1117:0,90,255:30,0 chr1 110255289 . T . PASS END=110255289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 110255290 . G . PASS END=110255293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 110255294 . A . PASS END=110255315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,77,255:26,0 chr1 110255741 . C . PASS END=110255805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:78:0,120,1800:0,218,255:40,0 chr1 110256052 . A . PASS END=110256182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:81:0,120,1800:0,189,255:40,0 chr1 110256183 . C . PASS END=110256187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:84:0,120,1800:0,235,255:40,0 chr1 110256283 . G . PASS END=110256383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:49:0,120,1800:0,134,255:40,0 chr1 110256575 . A . PASS END=110256625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,105,1582:0,105,255:40,0 chr1 110257569 . G . PASS END=110257664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:67:0,120,1800:0,158,255:40,0 chr1 110257752 . A . PASS END=110257788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,128,255:40,0 chr1 110257789 . A . PASS END=110257830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,148,255:40,0 chr1 110257831 . T C, 253.62 PASS DP=71;MQ=136.74;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,71,0:1.000,0.000:71:0,30,0:0,41,0:204:291,207,0,391,391,391:255,214,0:0,0:2.5362e+02,2.0362e+02,0.0000e+00,3.8839e+02,4.2316e+02,3.9140e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,30,41:0,0,33,38:110257831 chr1 110257832 . A . PASS END=110257834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,203,255:40,0 chr1 110257835 . C T, 251.94 PASS DP=72;MQ=136.79;FractionInformativeReads=0.972 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,70,0:1.000,0.000:70:0,30,0:0,40,0:202:290,205,0,390,390,390:255,219,0:0,0:2.5194e+02,2.0194e+02,0.0000e+00,3.8671e+02,4.2148e+02,3.8972e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,30,40:0,0,34,36:110257831 chr1 110257836 . T C, 253.96 PASS DP=72;MQ=136.79;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,72,0:1.000,0.000:72:0,31,0:0,41,0:204:292,207,0,392,392,392:255,219,0:0,0:2.5396e+02,2.0396e+02,0.0000e+00,3.8873e+02,4.2350e+02,3.9174e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,31,41:0,0,34,38:110257831 chr1 110257837 . T . PASS END=110257879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:61:0,120,1800:0,153,255:40,0 chr1 110257880 . C . PASS END=110257909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,150,255:40,0 chr1 110257910 . C . PASS END=110257946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:88:48:0,88,1620:0,88,255:40,0 chr1 110257947 . A C, 185.43 PASS DP=46;MQ=150.45;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,25,0:0,21,0:135:223,138,0,1746,138,1746:255,141,0:0,0:1.8543e+02,1.3543e+02,0.0000e+00,4.5000e+02,1.7020e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,36:0,0,25,21 chr1 110257948 . A . PASS END=110257966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1350:0,104,255:37,0 chr1 110257967 . G . PASS END=110257967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:27,0 chr1 110257968 . A . PASS END=110257984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1196:0,84,255:29,0 chr1 110257985 . A . PASS END=110257991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 110257992 . A . PASS END=110258019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 110258020 . G . PASS END=110258020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 110258021 . A . PASS END=110258027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110258624 . G . PASS END=110258712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,111,1665:0,161,255:40,0 chr1 110259959 . G . PASS END=110260033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1344:0,87,255:39,0 chr1 110260034 . T . PASS END=110260034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:33,0 chr1 110260035 . G . PASS END=110260047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,86,255:35,0 chr1 110260048 . G . PASS END=110260048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 110279693 . T . PASS END=110279791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,111,1794:0,111,255:40,0 chr1 110280009 . C . PASS END=110280014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr1 110280016 . A . PASS END=110280018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,121,255:40,0 chr1 110280020 . T . PASS END=110280037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,114,1710:0,127,255:40,0 chr1 110280039 . T . PASS END=110280050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 110280052 . A . PASS END=110280054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 110280056 . G . PASS END=110280061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,150,255:40,0 chr1 110280063 . G . PASS END=110280068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,162,255:40,0 chr1 110280071 . A . PASS END=110280189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,102,1506:0,110,255:40,0 chr1 110280252 . ATCC A, 242.63 PASS DP=65;MQ=249.43;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,65,0:1.000,0.000:65:0,31,0:0,34,0:193:275,196,0,2503,196,2503:255,175,0:0,82:2.4263e+02,1.9263e+02,0.0000e+00,4.5000e+02,2.2740e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,46,19:0,0,28,37 chr1 110280253 . T . LowGQ END=110280255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,84:85:0:84:0,0,0:255,217,0:0,82 chr1 110280278 . C . PASS END=110280302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,169,255:40,0 chr1 110280303 . T . PASS END=110280373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,120,1800:0,131,255:40,0 chr1 110280713 . G . PASS END=110280813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,120,1800:0,123,255:40,0 chr1 110280907 . A . PASS END=110280988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:33:0,84,1260:0,95,255:40,0 chr1 110282051 . A . PASS END=110282115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:43:0,96,1440:0,100,255:40,0 chr1 110282455 . C . PASS END=110282459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110282460 . C . PASS END=110282462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110282463 . C . PASS END=110282473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 110282474 . T . PASS END=110282474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 110282475 . T . PASS END=110282479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 110282480 . C . PASS END=110282480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 110282481 . T . PASS END=110282506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,898:0,62,255:26,0 chr1 110282507 . G . PASS END=110282517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 110282518 . T . PASS END=110282530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 110282862 . C . PASS END=110282909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,114,1576:0,116,255:40,0 chr1 110293013 . C . PASS END=110293024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr1 110293282 . C . PASS END=110293414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:34:0,90,1280:0,101,255:40,0 chr1 110293900 . G . PASS END=110293973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,134,255:40,0 chr1 110294014 . T . PASS END=110294139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:37:0,84,1327:0,84,255:40,0 chr1 110294140 . A . PASS END=110294140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:29,0 chr1 110294141 . A . PASS END=110294151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,92,255:31,0 chr1 110294276 . C . PASS END=110294294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:26,0 chr1 110294295 . T . PASS END=110294295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 110294296 . G . PASS END=110294310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 110294311 . C . PASS END=110294311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 110294312 . C . PASS END=110294314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110294315 . C . PASS END=110294331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1149:0,84,255:31,0 chr1 110294332 . T . PASS END=110294332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 110294333 . G . PASS END=110294390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1025:0,83,255:34,0 chr1 110294391 . C . PASS END=110294391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110294392 . T . PASS END=110294393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110294394 . T . PASS END=110294404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 110294617 . C . PASS END=110294641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,777:0,61,255:26,0 chr1 110294642 . G . PASS END=110294718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1014:0,85,255:36,0 chr1 110294719 . G . PASS END=110294719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:29,0 chr1 110294720 . G . PASS END=110294741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1205:0,87,255:30,0 chr1 110294742 . C . PASS END=110294743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 110294744 . G . PASS END=110294747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 110294748 . G . PASS END=110294760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,986:0,67,255:27,0 chr1 110294761 . G . PASS END=110294762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110294763 . G . PASS END=110294766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110294767 . C . PASS END=110294768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110294769 . T . PASS END=110294769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 110294770 . C . PASS END=110294772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110294773 . C . PASS END=110294773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110294774 . T . PASS END=110294774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:25,0 chr1 110294775 . G . PASS END=110294788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr1 110294789 . G . PASS END=110294811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr1 110294812 . C . PASS END=110294814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110294815 . C . PASS END=110294815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 110295308 . C . PASS END=110295342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,104,1443:0,104,255:40,0 chr1 110295739 . T . PASS END=110295756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1332:0,92,255:36,0 chr1 110295757 . A . PASS END=110295757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1210:0,61,255:34,0 chr1 110295758 . A . PASS END=110295820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1235:0,91,255:39,0 chr1 110299639 . C . PASS END=110299643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:30,0 chr1 110299644 . A . PASS END=110299644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 110299645 . G . PASS END=110299782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:30:0,83,1172:0,83,255:40,0 chr1 110299783 . A . PASS END=110299787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,82,255:26,0 chr1 110300103 . G . PASS END=110300103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:27,0 chr1 110300104 . A . PASS END=110300177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1260:0,92,255:40,0 chr1 110300424 . C . PASS END=110300424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 110300425 . A . PASS END=110300425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 110300426 . G . PASS END=110300427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 110300428 . A . PASS END=110300428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr1 110300429 . G . PASS END=110300466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1052:0,83,255:32,0 chr1 110300467 . T . PASS END=110300472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr1 110300473 . G . PASS END=110300473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr1 110300474 . C . PASS END=110300485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 110300566 . C . PASS END=110300587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1103:0,80,255:30,0 chr1 110300588 . C . PASS END=110300588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 110300589 . C . PASS END=110300592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 110300593 . A . PASS END=110300594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr1 110300595 . T . PASS END=110300595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 110300596 . T . PASS END=110300596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 110300597 . C . PASS END=110300597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 110300598 . T . PASS END=110300598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:30,0 chr1 110300599 . T . PASS END=110300612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1105:0,80,255:32,0 chr1 110300613 . T . PASS END=110300613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:29,0 chr1 110300614 . T . PASS END=110300633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:31,0 chr1 110300634 . T . PASS END=110300634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:26,0 chr1 110300635 . T . PASS END=110300636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 110300637 . C . PASS END=110300642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr1 110300643 . A . PASS END=110300644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110300645 . C . PASS END=110300674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 110300675 . C . PASS END=110300680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:21:0,54,810:0,61,255:19,0 chr1 110300938 . C . PASS END=110300946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,706:0,44,255:19,0 chr1 110300947 . C . PASS END=110300949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 110300950 . T . PASS END=110300951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 110300952 . G . PASS END=110300956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110300957 . T . PASS END=110300962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 110300963 . G . PASS END=110300966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110300967 . A . PASS END=110300967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,666:0,46,255:19,0 chr1 110300968 . G . PASS END=110300986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr1 110300987 . A . PASS END=110300987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 110300988 . G . PASS END=110301013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,838:0,72,255:25,0 chr1 110301014 . C . PASS END=110301015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 110301016 . G . PASS END=110301019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 110301020 . T . PASS END=110301022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 110301023 . C . PASS END=110301023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 110301024 . G . PASS END=110301031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 110301032 . G . PASS END=110301041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 110301042 . A . PASS END=110301046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110301047 . G . PASS END=110301047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110301048 . G . PASS END=110301050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110301051 . G . PASS END=110301053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 110301054 . C . PASS END=110301070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 110301071 . C . PASS END=110301071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 110301072 . A . PASS END=110301077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 110301146 . T . PASS END=110301148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110301149 . G . PASS END=110301170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:22,0 chr1 110301171 . C . PASS END=110301243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 110301244 . C . PASS END=110301253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 110301254 . C . PASS END=110301270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 110301271 . C . PASS END=110301276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 110301277 . A . PASS END=110301288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 110301684 . C . PASS END=110301693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,858:0,78,255:26,0 chr1 110301694 . G . PASS END=110301698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 110301699 . T . PASS END=110301699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 110301700 . C . PASS END=110301728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 110301729 . A . PASS END=110301739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 110301860 . C . PASS END=110301865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 110301866 . T . PASS END=110301866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:28,0 chr1 110301867 . T . PASS END=110301867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1125:0,82,255:29,0 chr1 110301868 . C . PASS END=110301868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,995:0,63,255:28,0 chr1 110301869 . C . PASS END=110301878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:33,0 chr1 110301879 . A . PASS END=110301879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1037:0,49,255:30,0 chr1 110301880 . A . PASS END=110301890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1119:0,82,255:34,0 chr1 110301891 . C . PASS END=110301891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:33,0 chr1 110301892 . T . PASS END=110301934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1235:0,88,255:39,0 chr1 110301935 . G . PASS END=110301935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:33,0 chr1 110301936 . G . PASS END=110301946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:35,0 chr1 110301947 . A . PASS END=110301947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr1 110301948 . C . PASS END=110301993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1078:0,87,255:36,0 chr1 110301994 . A . PASS END=110301994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 110301995 . A . PASS END=110301997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 110301998 . G . PASS END=110302009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 110302300 . C . PASS END=110302458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:38:0,82,1473:0,82,255:40,0 chr1 110302497 . T . PASS END=110302520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:45:0,117,1744:0,117,255:40,0 chr1 110304117 . C . PASS END=110304117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110304118 . T . PASS END=110304128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 110304129 . C . PASS END=110304129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 110304130 . T . PASS END=110304165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:31,0 chr1 110304166 . T . PASS END=110304166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 110304167 . A . PASS END=110304172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 110304173 . T . PASS END=110304173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:29,0 chr1 110304174 . C . PASS END=110304181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 110304341 . A . PASS END=110304371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:49:0,120,1800:0,143,255:40,0 chr1 110452990 . A . PASS END=110453049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:33:0,99,1205:0,99,255:40,0 chr1 110453646 . A . LowDepth;LowGQ END=110453652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:0,0 chr1 110453653 . C . LowDepth;LowGQ END=110453684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 110456881 . A . PASS END=110456881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 110456882 . C . PASS END=110456882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 110456883 . A . PASS END=110456997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1030:0,80,255:38,0 chr1 110456998 . C . PASS END=110457003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:25,0 chr1 110458256 . A . PASS END=110458318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,103,1800:0,103,255:40,0 chr1 110459915 . A . PASS END=110459915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr1 110459916 . A . PASS END=110459916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 110459917 . A . PASS END=110459917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr1 110459918 . G . PASS END=110460071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1105:0,90,255:40,0 chr1 110460072 . A . PASS END=110460076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 110460077 . C . PASS END=110460085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1133:0,90,255:30,0 chr1 110464469 . G . PASS END=110464485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,959:0,65,255:26,0 chr1 110464486 . C . PASS END=110464489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110464490 . G . PASS END=110464490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 110464491 . A . PASS END=110464543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1075:0,84,255:36,0 chr1 110464544 . A . PASS END=110464544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:32,0 chr1 110464545 . A . PASS END=110464607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1026:0,82,255:35,0 chr1 110464608 . C . PASS END=110464616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,934:0,70,255:26,0 chr1 110465788 . A . PASS END=110465819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,676:0,41,255:19,0 chr1 110465820 . T . PASS END=110465856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,701:0,60,255:25,0 chr1 110465857 . T . PASS END=110465857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 110465858 . C . PASS END=110465925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 110465926 . G . PASS END=110465926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 110465927 . A . PASS END=110465941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1000:0,72,255:26,0 chr1 110465942 . C . PASS END=110465958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:29,0 chr1 110465959 . A . PASS END=110465959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110465960 . G . PASS END=110465967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 110465968 . A . PASS END=110465982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 110465983 . G . PASS END=110465983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:22,0 chr1 110465984 . C . PASS END=110466069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr1 110466070 . G . PASS END=110466070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 110466071 . C . PASS END=110466083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 110466084 . C . PASS END=110466084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 110466085 . G . PASS END=110466089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 110466090 . T . PASS END=110466092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 110466093 . G . PASS END=110466098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110466099 . G . PASS END=110466112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:19,0 chr1 110466113 . G . PASS END=110466115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110466116 . G . PASS END=110466174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:19,0 chr1 110466175 . A . PASS END=110466175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:14,0 chr1 110466176 . G . PASS END=110466207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:17,0 chr1 110466208 . A . PASS END=110466208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:18,0 chr1 110466209 . G . PASS END=110466209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110466210 . C . PASS END=110466210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 110466211 . T . PASS END=110466213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110466214 . C . PASS END=110466217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110466218 . C . PASS END=110466226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:24,0 chr1 110466227 . A . PASS END=110466227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 110466228 . G . PASS END=110466235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:25,0 chr1 110466236 . C . PASS END=110466236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 110466237 . A . PASS END=110466237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 110466238 . G . PASS END=110466238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr1 110466239 . C . PASS END=110466247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 110466248 . A . PASS END=110466248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:24,0 chr1 110466249 . G . PASS END=110466251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110466252 . C . PASS END=110466258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1027:0,84,255:29,0 chr1 110466259 . G . PASS END=110466260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,964:0,71,255:29,0 chr1 110466261 . C . PASS END=110466270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:31,0 chr1 110466271 . T . PASS END=110466271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:29,0 chr1 110466272 . C . PASS END=110466284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 110466285 . T . PASS END=110466285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1038:0,79,255:28,0 chr1 110466286 . C . PASS END=110466296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1194:0,93,255:31,0 chr1 110466297 . G . PASS END=110466297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 110466298 . C . PASS END=110466299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 110466300 . T . PASS END=110466300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 110466301 . C . PASS END=110466301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 110466302 . A . PASS END=110466302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 110466303 . G . PASS END=110466305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1119:0,93,255:31,0 chr1 110466306 . A . PASS END=110466306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 110466307 . A . PASS END=110466309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 110466310 . G . PASS END=110466310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 110466311 . C . PASS END=110466323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1117:0,90,255:30,0 chr1 110466324 . G . PASS END=110466324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 110466325 . A . PASS END=110466337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 110466338 . C A, 140.30 PASS DP=32;MQ=250.00;FractionInformativeReads=0.969 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,14,0:0,17,0:90:178,93,0,1202,93,1202:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,21:0,0,15,16 chr1 110466339 . G . PASS END=110466341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 110466342 . T . PASS END=110466343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 110466344 . G . PASS END=110466344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 110466345 . C . PASS END=110466375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr1 110466376 . A . PASS END=110466389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 110466390 . A . PASS END=110466392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,1 chr1 110466393 . C . PASS END=110466397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 110466398 . G . PASS END=110466404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 110466405 . G . PASS END=110466406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 110466407 . C . PASS END=110466407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 110466408 . C . PASS END=110466408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110466409 . A . PASS END=110466438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 110466439 . A . PASS END=110466439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 110466440 . G . PASS END=110466454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 110466455 . G . PASS END=110466455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110466456 . A . PASS END=110466456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 110466457 . T . PASS END=110466474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 110466475 . A . PASS END=110466475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 110466476 . G . PASS END=110466477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110466478 . G . PASS END=110466478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 110466479 . C . PASS END=110466482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 110466483 . A . PASS END=110466483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 110466484 . G . PASS END=110466488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 110466489 . C . PASS END=110466489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 110466490 . C . PASS END=110466502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:25,0 chr1 110466503 . T . PASS END=110466503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 110466504 . G . PASS END=110466519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr1 110466520 . C . PASS END=110466534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:28,0 chr1 110466535 . C . PASS END=110466535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 110466536 . G . PASS END=110466537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 110466538 . G . PASS END=110466538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:25,0 chr1 110466539 . C . PASS END=110466540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110466541 . G . PASS END=110466606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,955:0,65,255:26,0 chr1 110466607 . C . PASS END=110466607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:25,0 chr1 110466608 . A . PASS END=110466608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110466609 . G . PASS END=110466614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 110466615 . G . PASS END=110466620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,955:0,67,255:26,0 chr1 110466621 . G . PASS END=110466621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110466622 . C . PASS END=110466624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110466625 . G . PASS END=110466625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110466626 . T . PASS END=110466626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 110466627 . G . PASS END=110466627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110466628 . A . PASS END=110466628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 110466629 . A . PASS END=110466629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110466630 . G . PASS END=110466630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 110466631 . G . PASS END=110466632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110466633 . G . PASS END=110466649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,62,255:25,0 chr1 110466650 . C . PASS END=110466651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 110466652 . G . PASS END=110466661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110466662 . C . PASS END=110466662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110466663 . G . PASS END=110466665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110466666 . C . PASS END=110466666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 110466667 . C . PASS END=110466671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 110466672 . A . PASS END=110466678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 110466679 . C . PASS END=110466680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 110466681 . G . PASS END=110466708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,806:0,62,255:23,0 chr1 110466709 . T C, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,13:0,0,14,9 chr1 110466710 . C . PASS END=110466728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 110466729 . T . PASS END=110466729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 110466730 . C . PASS END=110466731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 110466732 . G . PASS END=110466732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 110466733 . T . PASS END=110466733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,870:0,64,255:26,0 chr1 110466734 . C . PASS END=110466741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 110466742 . T . PASS END=110466745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:25,0 chr1 110466746 . G . PASS END=110466746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 110466747 . G . PASS END=110466763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:25:0,63,945:0,68,255:25,0 chr1 110466764 . G . PASS END=110466764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 110466765 . G . PASS END=110466781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 110466782 . A . PASS END=110466782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 110466783 . G . PASS END=110466785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 110466786 . C . PASS END=110466786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 110466787 . T . PASS END=110466787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 110466788 . C . PASS END=110466788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 110466789 . T . PASS END=110466791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 110466792 . T . PASS END=110466809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:17:0,41,630:0,41,255:18,0 chr1 110466810 . C . PASS END=110466812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 110467398 . A . PASS END=110467403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,917:0,64,255:26,0 chr1 110467404 . C . PASS END=110467406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 110467407 . G . PASS END=110467407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr1 110467408 . A . PASS END=110467410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 110467411 . C . PASS END=110467431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 110467432 . T . PASS END=110467432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr1 110467433 . G . PASS END=110467448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 110467449 . A . PASS END=110467449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 110467450 . G . PASS END=110467450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 110467769 . C . PASS END=110467782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr1 110467783 . A . PASS END=110467811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,164,255:40,0 chr1 110527675 . A . PASS END=110527676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 110527677 . G . PASS END=110527684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 110527685 . C . PASS END=110527695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 110527696 . C . PASS END=110527707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 110527708 . G . PASS END=110527710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 110527711 . G . PASS END=110527714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 110527715 . A . PASS END=110527715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 110527716 . G . PASS END=110527720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 110527721 . T . PASS END=110527721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 110527722 . G . PASS END=110527726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 110527727 . A . PASS END=110527727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:7,0 chr1 110527728 . G . PASS END=110527736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 110527737 . G . PASS END=110527744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr1 110527745 . A . PASS END=110527786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:9,0 chr1 110527787 . C . PASS END=110527787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 110527788 . C . PASS END=110527789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 110527790 . A . PASS END=110527790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,201:0,7,201:6,0 chr1 110527791 . G . PASS END=110527794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,213:7,0 chr1 110551656 . C . PASS END=110551683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1559:0,113,255:40,0 chr1 110551684 . A . PASS END=110551684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:73:54:0,73,1670:0,73,255:40,0 chr1 110551685 . G . PASS END=110551767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:36:0,81,1215:0,91,255:40,0 chr1 110553836 . C . PASS END=110553979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:37:0,88,1396:0,88,255:40,0 chr1 110554984 . A . PASS END=110554984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 110554985 . C . PASS END=110555053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1080:0,87,255:35,0 chr1 110555054 . G . PASS END=110555062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:25,0 chr1 110555063 . A . PASS END=110555084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:19,0 chr1 110555519 . G . PASS END=110555527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr1 110555528 . G . PASS END=110555530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 110555531 . A . PASS END=110555533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110555534 . C . PASS END=110555598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1141:0,90,255:32,0 chr1 110555599 . A . PASS END=110555618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 110555619 . C . PASS END=110555619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 110555620 . T . PASS END=110555621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110557385 . G . PASS END=110557479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,117,1755:0,134,255:40,0 chr1 110558047 . A . PASS END=110558153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,159,255:40,0 chr1 110558966 . G . PASS END=110559082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:31:0,90,1141:0,93,255:40,0 chr1 110559289 . C . PASS END=110559352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,159,255:40,0 chr1 110560117 . G . PASS END=110560205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,91,255:40,0 chr1 110560568 . C . PASS END=110560638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,105,1575:0,114,255:40,0 chr1 110560995 . G . PASS END=110560999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:95:35:0,95,1258:0,95,255:35,0 chr1 110561000 . A . PASS END=110561000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1219:0,64,255:33,0 chr1 110561001 . A . PASS END=110561089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,102,1390:0,102,255:40,0 chr1 110561174 . A . PASS END=110561272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:42:0,84,1260:0,102,255:40,0 chr1 110561673 . G . PASS END=110561741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,115,1755:0,115,255:40,0 chr1 110562170 . G . PASS END=110562248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,101,1374:0,101,255:40,0 chr1 110563353 . A . PASS END=110563473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1127:0,82,255:40,0 chr1 110564296 . A . PASS END=110564348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:64:0,120,1800:0,168,255:40,0 chr1 110577260 . A . PASS END=110577269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110577270 . C . PASS END=110577276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 110577277 . C . PASS END=110577277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 110577278 . G . PASS END=110577280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr1 110577281 . C . PASS END=110577281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 110577282 . C . PASS END=110577284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 110577285 . G . PASS END=110577285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 110577286 . C . PASS END=110577301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr1 110577302 . A . PASS END=110577302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 110577303 . A . PASS END=110577304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110577305 . A . PASS END=110577305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 110577306 . A . PASS END=110577306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110577307 . A . PASS END=110577331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,34,255:13,0 chr1 110577332 . C . LowGQ END=110577332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:19,0,255:10,0 chr1 110577333 . C . PASS END=110577356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,427:0,36,255:12,0 chr1 110577357 . C . PASS END=110577366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 110577367 . G . PASS END=110577367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 110577368 . C . PASS END=110577381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 110577382 . C . PASS END=110577386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 110577387 . T . PASS END=110577394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 110577395 . G . PASS END=110577410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 110577411 . T . PASS END=110577411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 110577412 . C . PASS END=110577414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 110577415 . C . PASS END=110577429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 110577430 . A . PASS END=110577439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 110580513 . G . PASS END=110580582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:42:0,88,1511:0,88,255:40,0 chr1 110581305 . A . PASS END=110581379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,111,1645:0,111,255:40,0 chr1 110581794 . T . PASS END=110581928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:29:0,81,1175:0,87,255:40,0 chr1 110582017 . G . PASS END=110582018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 110582019 . A . PASS END=110582019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 110582020 . C . PASS END=110582020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 110582021 . G . PASS END=110582021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr1 110582022 . T . PASS END=110582022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,823:0,76,255:29,0 chr1 110582023 . T . PASS END=110582027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 110582028 . G . PASS END=110582029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 110582030 . G . PASS END=110582035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 110582036 . C . PASS END=110582036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 110582037 . T . PASS END=110582040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 110582041 . A . PASS END=110582041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 110582042 . G . PASS END=110582044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 110582045 . A . PASS END=110582045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:28,0 chr1 110582046 . G . PASS END=110582073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1225:0,86,255:35,0 chr1 110582074 . T . PASS END=110582074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1211:0,77,255:32,0 chr1 110582075 . C . PASS END=110582127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1205:0,92,255:36,0 chr1 110582128 . T . PASS END=110582137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:31:0,72,1080:0,77,255:25,0 chr1 110582446 . A . PASS END=110582454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:8,0 chr1 110582455 . T . PASS END=110582455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 110582456 . G . PASS END=110582459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,213:0,24,213:9,0 chr1 110582460 . G . PASS END=110582464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 110582465 . G . PASS END=110582497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr1 110582498 . G . PASS END=110582503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:7:0,10,263:0,10,249:6,0 chr1 110583257 . C . PASS END=110583276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,872:0,68,255:25,0 chr1 110583277 . G . PASS END=110583325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1158:0,86,255:34,0 chr1 110583335 . G . PASS END=110583335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110584158 . G . PASS END=110584264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,109,1651:0,109,255:40,0 chr1 110584356 . G . PASS END=110584483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,102,1530:0,116,255:40,0 chr1 110585710 . T . PASS END=110585733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:25,0 chr1 110585734 . C . PASS END=110585734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 110585735 . T . PASS END=110585739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 110585740 . A . PASS END=110585740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:24,0 chr1 110585741 . G . PASS END=110585757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,917:0,65,255:25,0 chr1 110585758 . C . PASS END=110585758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 110585759 . G . PASS END=110585759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 110585760 . C . PASS END=110585760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 110585761 . A . PASS END=110585763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr1 110585764 . A . PASS END=110585768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 110585769 . G . PASS END=110585769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:29,0 chr1 110585770 . G . PASS END=110585784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1149:0,82,255:34,0 chr1 110585785 . C . PASS END=110585785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:32,0 chr1 110585786 . C . PASS END=110585800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1156:0,83,255:33,0 chr1 110585801 . A . PASS END=110585801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:29,0 chr1 110585802 . A . PASS END=110585806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1097:0,80,255:31,0 chr1 110585807 . T . PASS END=110585807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1001:0,63,255:29,0 chr1 110585808 . T . PASS END=110585810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 110585811 . C . PASS END=110585811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 110585812 . A . PASS END=110585812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 110585813 . A . PASS END=110585813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:28,0 chr1 110585814 . C . PASS END=110585819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 110585820 . A . PASS END=110585820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr1 110585821 . G . PASS END=110585821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 110585822 . C . PASS END=110585822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 110585823 . A . PASS END=110585826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 110585827 . T . PASS END=110585827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,868:0,27,255:25,0 chr1 110585828 . C . PASS END=110585838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 110585839 . T . PASS END=110585839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 110585840 . C . PASS END=110585841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110585842 . G . PASS END=110585842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr1 110585843 . C . PASS END=110585846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110585847 . A . PASS END=110585850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 110585851 . T . PASS END=110585851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,878:0,37,255:20,0 chr1 110585852 . T . PASS END=110585868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,848:0,69,255:24,0 chr1 110585869 . A . PASS END=110585869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 110585870 . A . PASS END=110585886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 110585887 . C . PASS END=110585892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 110586261 . G . PASS END=110586263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,955:0,75,255:26,0 chr1 110586264 . C . PASS END=110586386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,978:0,81,255:38,0 chr1 110586387 . G . PASS END=110586387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:28,0 chr1 110586388 . A . PASS END=110586406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 110586407 . T . PASS END=110586441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 110586442 . C . PASS END=110586442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110586443 . T . PASS END=110586467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,961:0,75,255:26,0 chr1 110586468 . C . PASS END=110586468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 110586469 . C . PASS END=110586478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:26,0 chr1 110586941 . G . PASS END=110586959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,167,255:40,0 chr1 110587462 . A . PASS END=110587527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:35:0,84,1250:0,84,255:40,0 chr1 110587637 . T . PASS END=110587637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:38,0 chr1 110587638 . G . PASS END=110587700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,103,1629:0,103,255:40,0 chr1 110589302 . C . PASS END=110589302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 110589303 . A . PASS END=110589305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 110589306 . A . PASS END=110589306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 110589307 . G . PASS END=110589308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110589309 . A . PASS END=110589309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 110589310 . C . PASS END=110589313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110589314 . T . PASS END=110589314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:27,0 chr1 110589315 . C . PASS END=110589318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110589319 . T . PASS END=110589319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 110589320 . G . PASS END=110589327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 110589328 . C . PASS END=110589331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110589332 . G . PASS END=110589334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 110589335 . C . PASS END=110589337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110589338 . A . PASS END=110589349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 110589350 . T . PASS END=110589361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,68,255:26,0 chr1 110589362 . C . PASS END=110589362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:22,0 chr1 110589363 . C . PASS END=110589369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 110589370 . A . PASS END=110589371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:19,0 chr1 110589372 . G . PASS END=110589373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 110590164 . G . PASS END=110590238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:34:0,81,1215:0,89,255:40,0 chr1 110590394 . A . PASS END=110590491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:60:0,120,1800:0,168,255:40,0 chr1 110591734 . C . PASS END=110591736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1426:0,101,255:40,0 chr1 110591737 . C . PASS END=110591737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1412:0,76,255:39,0 chr1 110591738 . A . PASS END=110591860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:43:0,96,1526:0,96,255:40,0 chr1 110592082 . T . PASS END=110592084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:93:47:0,93,1235:0,93,255:40,0 chr1 110592085 . G . PASS END=110592085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:46:47:0,46,1298:0,46,255:40,0 chr1 110592086 . A . PASS END=110592086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1537:0,72,255:40,0 chr1 110592087 . A . PASS END=110592087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 110592088 . T . LowGQ END=110592088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:0:49:0,0,1254:26,0,255:40,0 chr1 110592089 . A . PASS END=110592089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,117,1670:0,117,255:40,0 chr1 110592090 . C . LowGQ END=110592090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,13:49:0:49:0,0,944:142,0,255:35,0 chr1 110592091 . A . PASS END=110592091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 110592092 . T . PASS END=110592092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:53:49:0,53,1568:0,53,255:40,0 chr1 110592093 . G . PASS END=110592097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:91:49:0,91,1534:0,91,255:40,0 chr1 110592098 . A . PASS END=110592099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:65:57:0,65,1505:0,65,255:40,0 chr1 110592100 . C . PASS END=110592123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:86:58:0,86,1800:0,86,255:40,0 chr1 110592124 . C . PASS END=110592124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:78:61:0,78,1951:0,78,255:40,0 chr1 110592125 . C . PASS END=110592127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,105,1800:0,105,255:40,0 chr1 110592128 . T . PASS END=110592133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,102,1800:0,102,255:40,0 chr1 110592134 . T . PASS END=110592134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:41:58:0,41,1892:0,41,255:40,0 chr1 110592135 . A . PASS END=110592154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,100,1800:0,100,255:40,0 chr1 110592155 . T . PASS END=110592155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:60:57:0,60,1763:0,60,255:40,0 chr1 110592156 . C . PASS END=110592177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:83:47:0,83,1601:0,83,255:40,0 chr1 110592178 . A . PASS END=110592178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1550:0,69,255:38,0 chr1 110592179 . A . PASS END=110592182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:44:0,86,1571:0,86,255:38,0 chr1 110592965 . C . PASS END=110593031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:42:0,88,1484:0,88,255:40,0 chr1 110593578 . G . PASS END=110593682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,111,1684:0,111,255:40,0 chr1 110594305 . A . PASS END=110594305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110594306 . T . PASS END=110594312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 110594313 . G . PASS END=110594313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 110594314 . G . PASS END=110594320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,986:0,69,255:26,0 chr1 110594321 . A . PASS END=110594321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 110594322 . G . PASS END=110594322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 110594323 . T . PASS END=110594507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:30:0,87,1096:0,90,255:40,0 chr1 110594508 . T . PASS END=110594509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 110596287 . A . PASS END=110596287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 110596288 . T . PASS END=110596288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 110596289 . C . PASS END=110596322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:12,0 chr1 110596323 . A . PASS END=110596333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 110596334 . C . PASS END=110596334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 110596335 . G . PASS END=110596352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 110596353 . T . PASS END=110596353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110596354 . C . PASS END=110596365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 110596366 . C . PASS END=110596375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 110596376 . G . PASS END=110596389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:18,0 chr1 110596390 . T . PASS END=110596390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 110596391 . G . PASS END=110596399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 110596400 . C . PASS END=110596411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,845:0,63,255:22,0 chr1 110596412 . T . PASS END=110596412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr1 110596413 . G . PASS END=110596416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110596417 . G . PASS END=110596447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,645:0,54,255:19,0 chr1 110596448 . C . PASS END=110596452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110596453 . G . PASS END=110596454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 110596455 . A . PASS END=110596459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 110596460 . C . PASS END=110596520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 110596521 . A . PASS END=110596521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 110596522 . G . PASS END=110596534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 110603355 . T . PASS END=110603370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,657:0,41,255:18,0 chr1 110603371 . A . PASS END=110603375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr1 110603376 . G . PASS END=110603392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 110603393 . G . PASS END=110603396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 110603397 . T . PASS END=110603421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 110603422 . G . PASS END=110603422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 110603423 . A . PASS END=110603423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 110603424 . C . PASS END=110603427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 110603428 . T . PASS END=110603476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 110603477 . G . PASS END=110603477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 110603478 . A . PASS END=110603489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,574:0,48,255:16,0 chr1 110603490 . G . PASS END=110603490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 110603491 . G . PASS END=110603501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 110603502 . A . PASS END=110603522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 110603523 . T . PASS END=110603523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 110603524 . G . PASS END=110603560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 110603561 . G . PASS END=110603585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 110603586 . G . PASS END=110603595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 110603596 . T . PASS END=110603596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 110603597 . C . PASS END=110603605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 110603606 . C . PASS END=110603639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 110603640 . A . PASS END=110603640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 110603641 . C . PASS END=110603651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 110603652 . G . LowGQ END=110603652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:7,0 chr1 110603653 . G . PASS END=110603660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 110603661 . C . PASS END=110603661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 110603662 . A . PASS END=110603662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,202:0,7,202:7,0 chr1 110603663 . G . PASS END=110603663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 110604057 . C . PASS END=110604067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 110604068 . T . PASS END=110604073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 110604074 . T . PASS END=110604074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 110604075 . A . PASS END=110604079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:24,0 chr1 110604080 . G . PASS END=110604080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 110604081 . C . PASS END=110604081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 110604082 . A . PASS END=110604090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,922:0,62,255:24,0 chr1 110604091 . A . PASS END=110604091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:22,0 chr1 110604092 . T . PASS END=110604092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 110604093 . G . PASS END=110604097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 110604098 . A . PASS END=110604098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 110604099 . G . PASS END=110604100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 110604101 . C . PASS END=110604124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 110604125 . C . PASS END=110604125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 110604126 . C . PASS END=110604130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 110604131 . T . PASS END=110604131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:19,0 chr1 110604132 . C . PASS END=110604139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110604140 . A . PASS END=110604154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 110604155 . G . PASS END=110604155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr1 110604156 . C . PASS END=110604185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:19,0 chr1 110604187 . T . PASS END=110604187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,618:0,60,255:20,0 chr1 110607209 . C . PASS END=110607225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:19,0 chr1 110607226 . T . PASS END=110607228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 110607229 . G . PASS END=110607229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 110607230 . G . PASS END=110607230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 110607231 . T . PASS END=110607231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 110607232 . C . PASS END=110607264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,876:0,65,255:26,0 chr1 110607265 . C . PASS END=110607293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1072:0,84,255:30,0 chr1 110607294 . T . PASS END=110607296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 110607297 . T . PASS END=110607304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 110607305 . C . PASS END=110607312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 110607313 . G . PASS END=110607316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 110607317 . T . PASS END=110607348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:24,0 chr1 110607349 . T . PASS END=110607350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 110607351 . C . PASS END=110607351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr1 110607352 . T . PASS END=110607359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 110607360 . T . PASS END=110607372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,47,255:19,0 chr1 110607373 . T . PASS END=110607374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 110607375 . G . PASS END=110607396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 110607397 . G . PASS END=110607447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr1 110607448 . A . PASS END=110607490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,288:0,24,255:9,0 chr1 110607491 . G . PASS END=110607509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 110607510 . G . PASS END=110607516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 110607517 . T . PASS END=110607517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 110607518 . C . PASS END=110607525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr1 110612958 . C . PASS END=110612960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 110612961 . C . PASS END=110612971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 110612972 . T . PASS END=110612999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 110613000 . G . PASS END=110613044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,255:0,21,255:9,0 chr1 110613045 . G . PASS END=110613051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 110613052 . G . PASS END=110613052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 110613053 . A . PASS END=110613114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 110613115 . G . PASS END=110613117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 110613118 . G . PASS END=110613162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr1 110613163 . C . PASS END=110613175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 110613176 . G . LowGQ END=110613176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:8,0 chr1 110613177 . C . PASS END=110613183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 110613184 . G . PASS END=110613184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 110613185 . G . PASS END=110613189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,272:0,24,255:8,0 chr1 110613190 . G . PASS END=110613191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 110613192 . G . PASS END=110613206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:7,0 chr1 110613207 . G . PASS END=110613207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 110613208 . G . PASS END=110613209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 110613210 . A . PASS END=110613211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 110613212 . G . PASS END=110613212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 110613213 . G . PASS END=110613218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 110613219 . A . PASS END=110613234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:3:0,9,94:0,9,94:3,0 chr1 110655157 . A . PASS END=110655170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 110655171 . C . PASS END=110655171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 110655172 . A . PASS END=110655172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 110655173 . A . PASS END=110655173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 110655174 . G . PASS END=110655176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 110655177 . G . PASS END=110655177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 110655178 . C . PASS END=110655178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 110655179 . T . PASS END=110655182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 110655183 . G . PASS END=110655183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 110655184 . G . PASS END=110655188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 110655189 . G . PASS END=110655190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 110655191 . G . PASS END=110655196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,993:0,87,255:29,0 chr1 110655197 . G . PASS END=110655197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 110655198 . T . PASS END=110655199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110655200 . T . PASS END=110655200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 110655201 . G . PASS END=110655216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr1 110655217 . G . PASS END=110655219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 110655220 . A . PASS END=110655220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:23,0 chr1 110655221 . G . PASS END=110655225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1102:0,77,255:26,0 chr1 110655226 . G . PASS END=110655226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110655227 . C . PASS END=110655228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 110655229 . A . PASS END=110655242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 110655243 . G . PASS END=110655243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 110655244 . G . PASS END=110655248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr1 110655249 . C . PASS END=110655268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:26,0 chr1 110655269 . A . PASS END=110655269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:22,0 chr1 110655270 . G . PASS END=110655297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr1 110655298 . C . PASS END=110655298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 110655299 . A . PASS END=110655327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 110655328 . G . PASS END=110655334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 110655335 . G . PASS END=110655335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 110655336 . C . PASS END=110655357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,676:0,54,255:19,0 chr1 110655358 . A . PASS END=110655358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 110655359 . A . PASS END=110655380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 110655381 . G . PASS END=110655381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 110655382 . A . PASS END=110655467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,44,255:19,0 chr1 110655468 . A . PASS END=110655468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 110655469 . C . PASS END=110655470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 110655471 . G . PASS END=110655471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 110655472 . G . PASS END=110655489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:16,0 chr1 110655490 . C . PASS END=110655490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 110655491 . A . PASS END=110655495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr1 110655496 . C . PASS END=110655496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 110655497 . T . PASS END=110655499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 110655500 . G . PASS END=110655500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 110655501 . G . PASS END=110655515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,660:0,54,255:18,0 chr1 110655516 . G . PASS END=110655517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,588:0,35,255:16,0 chr1 110655518 . G . PASS END=110655601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:19,0 chr1 110655602 . A . PASS END=110655602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,520:0,21,255:13,0 chr1 110655603 . G . PASS END=110655618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 110655619 . A . PASS END=110655619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:15,0 chr1 110655620 . A . PASS END=110655631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 110655632 . A . PASS END=110655644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110655645 . C . PASS END=110655654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 110655655 . A . PASS END=110655655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr1 110655656 . A . PASS END=110655663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110655664 . G . PASS END=110655664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 110655665 . C . PASS END=110655681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 110709552 . A . PASS END=110709581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:24:0,71,900:0,71,255:26,0 chr1 110709582 . G . PASS END=110709760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1008:0,81,255:40,0 chr1 110709761 . C . PASS END=110709761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:34,0 chr1 110709762 . C . PASS END=110709763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1441:0,101,255:34,0 chr1 110709764 . G . PASS END=110709764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr1 110709765 . G . PASS END=110709800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:36,0 chr1 110709801 . T . PASS END=110709801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 110709802 . G . PASS END=110709802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110709803 . G . PASS END=110709837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,804:0,71,255:26,0 chr1 110714682 . G . PASS END=110714791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1094:0,81,255:38,0 chr1 110714792 . C . PASS END=110714799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,76,255:26,0 chr1 110714800 . A . PASS END=110714834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr1 110714835 . G . PASS END=110714835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 110714836 . C . PASS END=110714838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 110714839 . A . PASS END=110714839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 110716595 . G . PASS END=110716596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110716597 . C . PASS END=110716603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:29,0 chr1 110716604 . T . PASS END=110716604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:28,0 chr1 110716605 . T . PASS END=110716718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:31:0,90,1156:0,93,255:40,0 chr1 110716719 . C . PASS END=110716719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:30,0 chr1 110716720 . A . PASS END=110716721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 110717401 . T . PASS END=110717430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,515:0,48,255:18,0 chr1 110717431 . C . PASS END=110717431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 110717432 . C . PASS END=110717434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,682:0,54,255:18,0 chr1 110717435 . T . PASS END=110717435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 110717436 . A . PASS END=110717443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 110717444 . C . PASS END=110717444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 110717445 . T . PASS END=110717456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110717457 . G . PASS END=110717464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 110717465 . C . PASS END=110717477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 110717478 . A . PASS END=110717482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110717483 . G . PASS END=110717483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 110717484 . G . PASS END=110717503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 110717504 . G . PASS END=110717511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 110717512 . C . PASS END=110717514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110717515 . T . PASS END=110717540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr1 110717541 . G . PASS END=110717546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110717547 . A . PASS END=110717551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110717552 . T . PASS END=110717557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 110717558 . T . PASS END=110717559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,488:0,26,255:12,0 chr1 110717560 . A . PASS END=110717563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110717564 . C . PASS END=110717579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 110717580 . A . PASS END=110717582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 110719251 . G . PASS END=110719361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:38:0,87,1377:0,87,255:40,0 chr1 110734594 . C . PASS END=110734597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 110734598 . A . PASS END=110734602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 110734603 . A . PASS END=110734604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110734605 . G . PASS END=110734605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 110734606 . C . PASS END=110734620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:26,0 chr1 110734621 . T . PASS END=110734639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:30,0 chr1 110734640 . A . PASS END=110734640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 110734641 . G . PASS END=110734642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 110734643 . T . PASS END=110734643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 110734644 . C . PASS END=110734822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1177:0,80,255:40,0 chr1 110734823 . A . PASS END=110734831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 110734832 . T . PASS END=110734832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 110734833 . C . PASS END=110734835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1108:0,74,255:26,0 chr1 110735128 . G . PASS END=110735137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 110735138 . A . PASS END=110735138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,662:0,36,255:21,0 chr1 110735139 . A . PASS END=110735151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,853:0,69,255:25,0 chr1 110735152 . C . PASS END=110735168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1172:0,87,255:31,0 chr1 110735169 . T . PASS END=110735169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 110735170 . G . PASS END=110735251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1234:0,83,255:37,0 chr1 110735252 . A . PASS END=110735252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:27,0 chr1 110735253 . C . PASS END=110735266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1147:0,80,255:28,0 chr1 110735267 . C . PASS END=110735267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 110735268 . A . PASS END=110735272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 110735273 . T . PASS END=110735302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 110735303 . G . PASS END=110735319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,44,255:19,0 chr1 110735320 . G . PASS END=110735320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 110737201 . T . PASS END=110737215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:19,0 chr1 110737216 . G . PASS END=110737245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,63,255:25,0 chr1 110737246 . A . PASS END=110737250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110737251 . G . PASS END=110737251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 110737252 . C . PASS END=110737273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1172:0,87,255:34,0 chr1 110737274 . G . PASS END=110737275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1233:0,72,255:33,0 chr1 110737276 . T . PASS END=110737371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:35:0,80,1207:0,80,255:40,0 chr1 110737372 . G . PASS END=110737374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 110737375 . C . PASS END=110737378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110737379 . A . PASS END=110737393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 110738208 . T . PASS END=110738346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,99,1429:0,104,255:40,0 chr1 110738347 . C . PASS END=110738347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1412:0,68,255:26,0 chr1 110738348 . T . PASS END=110738367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1148:0,83,255:31,0 chr1 110740059 . G . PASS END=110740069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 110740070 . A . PASS END=110740070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 110740071 . G . PASS END=110740081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110740082 . T . PASS END=110740090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 110740091 . T . PASS END=110740091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 110740092 . C . PASS END=110740112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 110740113 . C . PASS END=110740113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 110740114 . T . PASS END=110740123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 110740124 . A . PASS END=110740124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:20,0 chr1 110740125 . G . PASS END=110740129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:21,0 chr1 110740130 . T . PASS END=110740130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 110740131 . G . PASS END=110740136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 110740137 . A . PASS END=110740166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,47,255:19,0 chr1 110740167 . C . PASS END=110740167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 110740168 . A . PASS END=110740174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 110740175 . A . PASS END=110740175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 110740176 . G . PASS END=110740181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 110740182 . G . PASS END=110740191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,520:0,31,255:13,0 chr1 110740192 . C . PASS END=110740221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,296:0,27,255:9,0 chr1 110740698 . G . PASS END=110740707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,545:0,45,255:16,0 chr1 110740708 . G . PASS END=110740708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:15,0 chr1 110740709 . C . PASS END=110740725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,537:0,48,255:16,0 chr1 110740726 . A . PASS END=110740726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 110740727 . C . PASS END=110740741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:16,0 chr1 110740742 . C . PASS END=110740742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 110740743 . C . PASS END=110740743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 110740744 . T . PASS END=110740744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 110740745 . G . PASS END=110740770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,615:0,51,255:18,0 chr1 110740771 . T . PASS END=110740771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 110740772 . G . PASS END=110740812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:16,0 chr1 110740813 . T . PASS END=110740813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 110740814 . C . PASS END=110740825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:19,0 chr1 110740826 . C . PASS END=110740850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,734:0,66,255:23,0 chr1 110740851 . A . PASS END=110740851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 110740852 . A . PASS END=110740867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,798:0,62,255:26,0 chr1 110740868 . G . PASS END=110740868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 110740869 . G . PASS END=110740869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 110740870 . A . PASS END=110740878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,912:0,81,255:29,0 chr1 110740879 . A . PASS END=110740879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,897:0,70,255:28,0 chr1 110740880 . C . PASS END=110740885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 110740886 . G . PASS END=110740886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 110740887 . G . PASS END=110740889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110740890 . A . PASS END=110740909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:25:0,71,925:0,71,255:26,0 chr1 110740910 . C . PASS END=110740911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 110740912 . T . PASS END=110740912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 110740913 . C . PASS END=110740916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 110740917 . A . PASS END=110740957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,890:0,62,255:26,0 chr1 110740958 . T . PASS END=110740958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,864:0,47,255:24,0 chr1 110740959 . T . PASS END=110740967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 110740968 . G . PASS END=110740968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:24,0 chr1 110740969 . G . PASS END=110740986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr1 110740987 . C . PASS END=110740987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 110740988 . C . PASS END=110740992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 110740993 . A . PASS END=110740993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 110740994 . G . PASS END=110741001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 110741002 . G . PASS END=110741002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:21,0 chr1 110741003 . T . PASS END=110741003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 110741004 . A . PASS END=110741010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 110741011 . A . PASS END=110741011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,652:0,36,255:17,0 chr1 110741012 . T . PASS END=110741066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,621:0,44,255:18,0 chr1 110754122 . A . PASS END=110754123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 110754124 . G . PASS END=110754127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 110754128 . A . PASS END=110754128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 110754129 . G . PASS END=110754133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 110754134 . G . PASS END=110754155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,335:0,30,255:13,0 chr1 110754156 . G . PASS END=110754169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:18,0 chr1 110754170 . A . PASS END=110754172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 110754173 . A . PASS END=110754202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 110754203 . G . PASS END=110754221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,626:0,60,255:22,0 chr1 110754222 . C . PASS END=110754222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 110754223 . G . PASS END=110754229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:24,0 chr1 110754230 . A . PASS END=110754230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,701:0,55,255:23,0 chr1 110754231 . A . PASS END=110754242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 110754243 . A . PASS END=110754243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,747:0,58,255:21,0 chr1 110754244 . C . PASS END=110754256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:23,0 chr1 110754257 . C . PASS END=110754257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr1 110754258 . G . PASS END=110754260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110754261 . A . PASS END=110754267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 110754268 . C . PASS END=110754274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 110754275 . A . PASS END=110754304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:18,0 chr1 110754305 . C . PASS END=110754305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 110754306 . T . PASS END=110754308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 110754309 . C . PASS END=110754309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 110754310 . C . PASS END=110754310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 110754311 . T . PASS END=110754319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:17,0 chr1 110754320 . G . PASS END=110754320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 110754321 . A . PASS END=110754335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,637:0,54,255:19,0 chr1 110754336 . G . PASS END=110754336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 110754337 . C . PASS END=110754343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr1 110754344 . G . PASS END=110754344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:15,0 chr1 110754345 . A . PASS END=110754348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 110754349 . C . PASS END=110754349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 110754350 . G . PASS END=110754353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 110754354 . G . PASS END=110754354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 110754355 . C . PASS END=110754382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,529:0,45,255:17,0 chr1 110754383 . G . PASS END=110754383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 110754384 . G . PASS END=110754404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr1 110754405 . T . PASS END=110754406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 110754407 . T . PASS END=110754420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 110754421 . G . PASS END=110754421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 110754422 . G . PASS END=110754430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,550:0,45,255:15,0 chr1 110754431 . G . PASS END=110754436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 110754437 . G . PASS END=110754440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 110754441 . T . PASS END=110754441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 110754442 . C . PASS END=110754442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 110754443 . A . PASS END=110754447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 110754448 . C . PASS END=110754452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr1 110754453 . G . PASS END=110754453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 110754454 . C . PASS END=110754458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 110754459 . G . PASS END=110754462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 110754463 . G . PASS END=110754470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:9,0 chr1 110754471 . G . PASS END=110754491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 110754492 . C . PASS END=110754492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 110754493 . G . PASS END=110754525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,451:0,39,255:13,0 chr1 110754526 . C . PASS END=110754543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 110754544 . A . PASS END=110754544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 110754545 . C . PASS END=110754550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 110754551 . T . PASS END=110754576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,335:0,30,255:13,0 chr1 110754577 . C . PASS END=110754587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:9,0 chr1 110754588 . A . PASS END=110754588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 110754589 . G . PASS END=110754598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 110754599 . A . PASS END=110754653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 110754654 . G . PASS END=110754676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr1 110754677 . C . PASS END=110754725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 110754726 . C . PASS END=110754726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 110754727 . T . PASS END=110754732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 110754733 . C . PASS END=110754733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 110754734 . T . PASS END=110754755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 110754756 . T . PASS END=110754756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 110754757 . G . PASS END=110754763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,398:0,36,255:13,0 chr1 110754764 . C . PASS END=110754797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 110754798 . G . PASS END=110754799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 110765586 . G . PASS END=110765589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,599:0,48,255:17,0 chr1 110765590 . T . PASS END=110765590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 110765591 . G . PASS END=110765598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr1 110765599 . C . LowGQ END=110765600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,304:0,0,255:12,0 chr1 110765601 . T . PASS END=110765601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 110765602 . C . PASS END=110765602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,463:0,37,255:15,0 chr1 110765603 . T . PASS END=110765603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 110765604 . C . PASS END=110765604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,344:0,1,255:13,0 chr1 110765605 . T . PASS END=110765605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110765606 . C . PASS END=110765606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr1 110765607 . T . PASS END=110765610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 110765611 . T . PASS END=110765611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 110765612 . C . PASS END=110765633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr1 110765634 . T . PASS END=110765634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:14,0 chr1 110765635 . T . PASS END=110765645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:16,0 chr1 110765646 . A . PASS END=110765646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,488:0,21,255:14,0 chr1 110765647 . C . PASS END=110765647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 110765648 . C . PASS END=110765648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:15,0 chr1 110765649 . C . PASS END=110765657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,537:0,48,255:17,0 chr1 110765658 . T . PASS END=110765658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:16,0 chr1 110765659 . T . PASS END=110765661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 110765662 . A . PASS END=110765663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 110765664 . A . PASS END=110765669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,570:0,54,255:18,0 chr1 110765670 . C . PASS END=110765670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 110765671 . G . PASS END=110765680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,615:0,46,255:19,0 chr1 110765681 . A . PASS END=110765681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:18,0 chr1 110765682 . G . PASS END=110765682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 110765683 . A . PASS END=110765684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 110765685 . A . LowGQ END=110765685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,682:0,0,255:19,0 chr1 110765686 . T . PASS END=110765688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 110765689 . T . PASS END=110765690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 110765691 . C . PASS END=110765691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110765692 . G . PASS END=110765692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 110765693 . C . PASS END=110765695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 110765696 . A . PASS END=110765696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 110765697 . G . PASS END=110765699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 110765700 . A . PASS END=110765700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr1 110765701 . A . PASS END=110765708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 110765709 . A . PASS END=110765709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,764:0,41,255:21,0 chr1 110765710 . G . PASS END=110765712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 110765713 . T . PASS END=110765713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 110765714 . G . PASS END=110765714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 110765715 . C . PASS END=110765715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 110765716 . A . PASS END=110765718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 110765719 . T . PASS END=110765719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:21,0 chr1 110765720 . C . PASS END=110765720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 110765721 . C . PASS END=110765721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr1 110765722 . G . PASS END=110765722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 110765723 . G . PASS END=110765723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:21,0 chr1 110765724 . C . PASS END=110765739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,939:0,72,255:25,0 chr1 110765740 . A . PASS END=110765742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:28,0 chr1 110765743 . C . PASS END=110765743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 110765744 . C . PASS END=110765754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 110765755 . A . PASS END=110765756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 110765757 . A . PASS END=110765928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1147:0,80,255:36,0 chr1 110765929 . A . PASS END=110765947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:25,0 chr1 110765948 . C . PASS END=110765948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 110765949 . G . PASS END=110766000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,814:0,63,255:25,0 chr1 110766001 . T . PASS END=110766002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110766003 . G . PASS END=110766003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110766004 . G . PASS END=110766007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 110766008 . A . PASS END=110766008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:17,0 chr1 110766009 . C . PASS END=110766010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:18,0 chr1 110766011 . C . PASS END=110766011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:17,0 chr1 110766012 . G . PASS END=110766021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 110766022 . A . PASS END=110766022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110766023 . C . PASS END=110766043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:18:0,43,623:0,43,255:19,0 chr1 110766044 . T . PASS END=110766046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 110766047 . G . PASS END=110766059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110766060 . A . PASS END=110766076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 110766077 . G . PASS END=110766077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 110766078 . G . PASS END=110766088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 110766089 . C . PASS END=110766103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 110766104 . C . PASS END=110766113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:23,0 chr1 110766114 . G . PASS END=110766114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 110766115 . A . PASS END=110766128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,886:0,61,255:23,0 chr1 110766129 . A . PASS END=110766129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 110766130 . G . PASS END=110766156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 110766157 . A . PASS END=110766157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 110766158 . C . PASS END=110766164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 110766165 . T . PASS END=110766165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:22,0 chr1 110766166 . T . PASS END=110766187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:26,0 chr1 110766188 . C . PASS END=110766203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:29,0 chr1 110766204 . A . PASS END=110766204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1060:0,77,255:29,0 chr1 110766205 . C . PASS END=110766205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 110766206 . C . PASS END=110766206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 110766207 . A . PASS END=110766211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1139:0,80,255:30,0 chr1 110766212 . G . PASS END=110766212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 110766213 . A . PASS END=110766216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:32,0 chr1 110766217 . T . PASS END=110766217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:27,0 chr1 110766218 . G . PASS END=110766242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:32,0 chr1 110766243 . A . PASS END=110766243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:27,0 chr1 110766244 . C . PASS END=110766244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110766245 . G . PASS END=110766252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1080:0,77,255:26,0 chr1 110766253 . G . PASS END=110766254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 110766255 . A . PASS END=110766255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 110766256 . T . PASS END=110766258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 110766259 . T . PASS END=110766262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 110766263 . A . PASS END=110766263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:24,0 chr1 110766264 . G . PASS END=110766282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:26,0 chr1 110766283 . C . PASS END=110766283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 110766284 . T . PASS END=110766308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:23,0 chr1 110766309 . G . PASS END=110766309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 110766310 . T . PASS END=110766315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,862:0,69,255:25,0 chr1 110766316 . T . PASS END=110766316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 110766317 . C . PASS END=110766324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr1 110766325 . A . PASS END=110766325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,750:0,58,255:23,0 chr1 110766326 . C . PASS END=110766327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 110766328 . A . PASS END=110766328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 110766329 . C . PASS END=110766331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 110766332 . C . PASS END=110766332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 110766333 . G . PASS END=110766333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 110766334 . G . PASS END=110766334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 110766335 . C . PASS END=110766336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 110766337 . T . PASS END=110766338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:25:0,45,821:0,45,255:22,0 chr1 110766339 . T . PASS END=110766348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:24,0 chr1 110766349 . T . PASS END=110766349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 110766350 . G . PASS END=110766357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 110766358 . C . PASS END=110766441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,482:0,41,255:19,0 chr1 110766442 . A . PASS END=110766449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110766450 . C . PASS END=110766451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 110766452 . C . PASS END=110766467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 110766468 . A . PASS END=110766468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 110766469 . G . PASS END=110766491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 110766492 . G . PASS END=110766492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 110766493 . A . PASS END=110766494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 110766495 . G . PASS END=110766519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 110766520 . C . PASS END=110766522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 110768597 . A . PASS END=110768601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 110768602 . A . PASS END=110768615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 110768616 . T . PASS END=110768616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 110768617 . G . PASS END=110768617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 110768618 . C . PASS END=110768618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,837:0,36,255:24,0 chr1 110768619 . C . PASS END=110768619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 110768620 . A . PASS END=110768620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 110768621 . A . PASS END=110768627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,887:0,81,255:27,0 chr1 110768628 . G . PASS END=110768628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 110768629 . C . PASS END=110768629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 110768630 . T . PASS END=110768630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 110768631 . G . PASS END=110768636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:29,0 chr1 110768637 . T . PASS END=110768637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 110768638 . G . PASS END=110768641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 110768642 . A . PASS END=110768642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 110768643 . G . PASS END=110768644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110768645 . G . PASS END=110768645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 110768646 . A . PASS END=110768649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 110768650 . G . PASS END=110768651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 110768652 . C . PASS END=110768653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110768654 . T . PASS END=110768654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:26,0 chr1 110768655 . C . PASS END=110768660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 110768661 . A . PASS END=110768661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr1 110768662 . C . PASS END=110768671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110768672 . C . PASS END=110768672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 110768673 . C . PASS END=110768673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110768674 . T . PASS END=110768674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 110768675 . C . PASS END=110768696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr1 110768697 . G . PASS END=110768722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,906:0,62,255:26,0 chr1 110768723 . A . PASS END=110768723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 110768724 . C . PASS END=110768726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:24,0 chr1 110768727 . A . PASS END=110768727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 110768728 . A . PASS END=110768731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr1 110768732 . A . PASS END=110768732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 110768733 . G . PASS END=110768733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,751:0,25,255:22,0 chr1 110768734 . A . PASS END=110768735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,829:0,44,255:23,0 chr1 110768736 . G . PASS END=110768736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 110768737 . G . PASS END=110768737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 110768738 . C . PASS END=110768755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 110768756 . T . PASS END=110768777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:20:0,42,630:0,44,255:19,0 chr1 110768778 . C . PASS END=110768783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 110768784 . T . PASS END=110768785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 110768786 . G . PASS END=110768786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 110768787 . T . PASS END=110768788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 110768789 . G . PASS END=110768800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 110771155 . G . PASS END=110771162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110771163 . A . PASS END=110771164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 110771165 . G . PASS END=110771166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 110771167 . C . PASS END=110771167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 110771168 . C . PASS END=110771176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 110771177 . A . PASS END=110771177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 110771178 . A . PASS END=110771178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr1 110771179 . A . PASS END=110771187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 110771188 . T . PASS END=110771192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 110771193 . G . PASS END=110771199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 110771200 . G . PASS END=110771200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 110771201 . A . PASS END=110771201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 110771202 . A . PASS END=110771227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:23,0 chr1 110771228 . A . PASS END=110771240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,50,255:20,0 chr1 110771241 . T . PASS END=110771243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 110771244 . C . PASS END=110771256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:14,0 chr1 110771257 . A . PASS END=110771261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110771262 . T . PASS END=110771262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110771263 . T . PASS END=110771280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 110771281 . A . PASS END=110771281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 110771282 . C . PASS END=110771286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 110771287 . T . LowGQ END=110771287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,269:14,0,255:8,0 chr1 110771288 . C . PASS END=110771291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 110771292 . G . PASS END=110771293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:8,0 chr1 110771294 . C . PASS END=110771302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 110771303 . T . LowGQ END=110771304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,200:3,0,219:7,0 chr1 110771305 . G . PASS END=110771306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,244:9,0 chr1 110771307 . C . PASS END=110771307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr1 110771308 . A . PASS END=110771309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 110771310 . T . LowGQ END=110771310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,227:12,0,239:7,0 chr1 110771311 . C . PASS END=110771311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 110771312 . T . LowGQ END=110771312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,202:20,0,222:6,0 chr1 110771313 . G . PASS END=110771313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:7,0 chr1 110771314 . C . PASS END=110771315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 110771316 . C . PASS END=110771317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 110771318 . T . LowGQ END=110771318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,130:40,0,170:5,0 chr1 110771319 . T . PASS END=110771320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 110771321 . G . PASS END=110771321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:5,0 chr1 110774843 . G . PASS END=110775132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:36:0,81,1288:0,81,255:40,0 chr1 110775133 . C . PASS END=110775133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1379:0,70,255:33,0 chr1 110775134 . A . PASS END=110775157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,89,255:35,0 chr1 110775158 . G . PASS END=110775162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:27,0 chr1 110775163 . G . PASS END=110775168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:27:0,73,995:0,73,255:26,0 chr1 110775169 . T . PASS END=110775169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110775170 . T . PASS END=110775172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 110775471 . A . PASS END=110775526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,149,255:40,0 chr1 110775533 . A . PASS END=110775610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,199,255:40,0 chr1 110789871 . G . PASS END=110789881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,4:89:99:86:0,120,1800:0,129,255:40,0 chr1 110825156 . C . PASS END=110825193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,131,255:40,0 chr1 110882028 . A . PASS END=110882028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 110882029 . T . PASS END=110882031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 110882032 . G . PASS END=110882109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr1 110882110 . G . PASS END=110882110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 110882111 . G . PASS END=110882159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,628:0,41,255:19,0 chr1 110882160 . A . PASS END=110882171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:22,0 chr1 110882172 . G . PASS END=110882191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,50,255:19,0 chr1 110882192 . C . PASS END=110882193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110882194 . A . PASS END=110882194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 110882195 . A . PASS END=110882201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 110882202 . C . PASS END=110882244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:17:0,46,607:0,46,255:19,0 chr1 110882245 . A . PASS END=110882245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 110882246 . G . PASS END=110882278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr1 110882279 . C . PASS END=110882279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 110882280 . A . PASS END=110882288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 110882289 . A . PASS END=110882289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,525:0,34,255:15,0 chr1 110882290 . C . PASS END=110882306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:16,0 chr1 110882307 . T . PASS END=110882307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 110882308 . C . PASS END=110882317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 110882318 . T . PASS END=110882318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,441:0,15,255:13,0 chr1 110882319 . C . PASS END=110882330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 110882331 . A . PASS END=110882341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:15:0,31,495:0,31,255:13,0 chr1 110882342 . T . PASS END=110882342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 110882343 . C . PASS END=110882363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 110882364 . G . PASS END=110882365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 110882366 . T . PASS END=110882369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 110882370 . G . PASS END=110882376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 110882377 . G . PASS END=110882406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 110882407 . G . PASS END=110882443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,321:0,33,255:13,0 chr1 110882444 . A G, 86.13 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,7,0:0,6,0:36:124,39,0,504,39,504:255,39,0:0,0:8.6127e+01,3.6127e+01,1.0596e-03,4.5000e+02,7.0897e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,6:0,0,9,4 chr1 110882445 . T . PASS END=110882455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 110882456 . C . PASS END=110882459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 110882460 . C . PASS END=110882461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 110882462 . G . PASS END=110882462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 110882463 . G . PASS END=110882463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:13,0 chr1 110882464 . G . PASS END=110882481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr1 110882482 . G . PASS END=110882482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 110882483 . T . PASS END=110882483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 110882484 . T . PASS END=110882486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 110882487 . T . PASS END=110882487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:14,0 chr1 110882488 . C . PASS END=110882509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:16,0 chr1 110882510 . C . PASS END=110882510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 110882511 . G . PASS END=110882511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 110882512 . G . PASS END=110882512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 110882513 . C . PASS END=110882514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 110882515 . G . PASS END=110882515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 110882516 . C . PASS END=110882516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 110882517 . G . PASS END=110882517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 110882518 . G . PASS END=110882518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 110882519 . G . PASS END=110882519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 110882520 . G . PASS END=110882529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:49:18:0,49,631:0,49,255:21,0 chr1 110882530 . A . PASS END=110882536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 110882537 . G . PASS END=110882537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 110882538 . A . PASS END=110882545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,886:0,65,255:26,0 chr1 110882546 . G . PASS END=110882553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 110882554 . A . PASS END=110882554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,898:0,26,255:25,0 chr1 110882555 . G . PASS END=110882578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,1025:0,80,255:35,0 chr1 110882579 . A . PASS END=110882579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1186:0,58,255:31,0 chr1 110882580 . G . PASS END=110882685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1205:0,86,255:38,0 chr1 110882686 . T . PASS END=110882686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 110882687 . G . PASS END=110882688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 110882689 . A . PASS END=110882689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 110882690 . C . PASS END=110882700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr1 110882701 . C . PASS END=110882712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr1 110882713 . G . PASS END=110882713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 110882714 . G . PASS END=110882723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 110882724 . C . PASS END=110882743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr1 110882744 . G . PASS END=110882744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:15,0 chr1 110882745 . C . PASS END=110882745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:17,0 chr1 110882746 . T . PASS END=110882746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:18,0 chr1 110882747 . C . PASS END=110882749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 110882750 . T . PASS END=110882750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:20,0 chr1 110882751 . G . PASS END=110882756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:23,0 chr1 110882757 . C . PASS END=110882759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 110882760 . C . PASS END=110882760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110882761 . T . PASS END=110882761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:21,0 chr1 110882762 . G . PASS END=110882765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110882766 . A . PASS END=110882766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:20,0 chr1 110882767 . T . PASS END=110882767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 110882768 . A . PASS END=110882772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,776:0,66,255:22,0 chr1 110882773 . C . PASS END=110882773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 110882774 . T . PASS END=110882774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 110882775 . G . PASS END=110882793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,898:0,61,255:25,0 chr1 110882794 . G . PASS END=110882794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 110882795 . C . PASS END=110882795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 110882796 . A . PASS END=110882796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 110882797 . G . PASS END=110882831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,864:0,75,255:25,0 chr1 110882832 . T . PASS END=110882832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 110882833 . C . PASS END=110882865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 110882866 . A . PASS END=110882866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr1 110882867 . C . PASS END=110882867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 110882868 . C . PASS END=110882868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 110882869 . G . PASS END=110882883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,963:0,65,255:26,0 chr1 110882884 . G . PASS END=110882897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:21:0,51,765:0,55,255:19,0 chr1 110882898 . A . PASS END=110882898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 110882899 . G . PASS END=110882899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110882900 . A . PASS END=110882918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:23,0 chr1 110882919 . G . PASS END=110882919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 110882920 . C . PASS END=110882954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,945:0,62,255:26,0 chr1 110882955 . T . PASS END=110882955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,750:0,47,255:24,0 chr1 110882956 . T . PASS END=110882959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr1 110882960 . T . PASS END=110882960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,714:0,39,255:25,0 chr1 110882961 . C . PASS END=110883011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,895:0,62,255:26,0 chr1 110883012 . A . PASS END=110883012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:21,0 chr1 110883013 . G . PASS END=110883021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,791:0,66,255:22,0 chr1 110883022 . A . PASS END=110883022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 110883023 . C . PASS END=110883098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,752:0,62,255:26,0 chr1 110883099 . T . PASS END=110883100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 110883101 . C . PASS END=110883101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 110883102 . A . PASS END=110883232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1148:0,80,255:36,0 chr1 110883233 . A . PASS END=110883233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:29,0 chr1 110883234 . G . PASS END=110883245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:30,0 chr1 110883246 . A . PASS END=110883246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 110883247 . G . PASS END=110883248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 110883249 . C . PASS END=110883249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 110883250 . C . PASS END=110883251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 110883252 . T . PASS END=110883252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,861:0,76,255:29,0 chr1 110883253 . C . PASS END=110883256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 110883257 . C . PASS END=110883257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 110883258 . G . PASS END=110883258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 110883259 . G . PASS END=110883259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 110883260 . C . PASS END=110883267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 110883268 . G . PASS END=110883273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 110883274 . A . PASS END=110883277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 110883278 . C . PASS END=110883280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 110883281 . T . PASS END=110883285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110883286 . A . PASS END=110883290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110883291 . G . PASS END=110883292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110883293 . G . PASS END=110883311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 110883312 . C . PASS END=110883312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr1 110883313 . G . PASS END=110883322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 110883323 . A . PASS END=110883324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110883325 . C . PASS END=110883341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,701:0,63,255:21,0 chr1 110883342 . A . PASS END=110883342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 110883343 . T . PASS END=110883348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 110883349 . G . PASS END=110883349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 110883350 . G . PASS END=110883355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110883356 . T . PASS END=110883356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 110883357 . A . PASS END=110883362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 110883363 . A . PASS END=110883363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr1 110883364 . T . PASS END=110883370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 110883371 . T . PASS END=110883376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 110883377 . A . PASS END=110883379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 110883380 . T . PASS END=110883381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 110883382 . C . PASS END=110883383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 110883384 . C . PASS END=110883432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,629:0,40,255:19,0 chr1 110883433 . C . PASS END=110883434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:17:0,38,585:0,38,255:13,0 chr1 110883435 . G . PASS END=110883438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 110883439 . T . PASS END=110883439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 110883440 . G . PASS END=110883441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 110883442 . C . PASS END=110883442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 110883443 . A . PASS END=110883448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 110883449 . A . PASS END=110883449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 110883450 . T . PASS END=110883461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 110883462 . G . PASS END=110883463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:16:0,35,585:0,35,255:13,0 chr1 110883464 . C . PASS END=110883474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,47,255:18,0 chr1 110883475 . C . PASS END=110883476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 110883477 . A . PASS END=110883477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 110883478 . T . PASS END=110883488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 110883489 . A . PASS END=110883491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 110883492 . G . PASS END=110883513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 110883514 . A . PASS END=110883514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 110883515 . G . PASS END=110883516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110883517 . A . PASS END=110883517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,751:0,14,255:19,0 chr1 110883518 . T . PASS END=110883519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110883520 . A . PASS END=110883522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 110883523 . G . PASS END=110883548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:26,0 chr1 110883549 . A . PASS END=110883549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110883550 . C . PASS END=110883551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110883552 . C . PASS END=110883553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110883554 . T . PASS END=110883555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1023:0,71,255:29,0 chr1 110883556 . T . PASS END=110883560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 110883561 . G . PASS END=110883561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 110883562 . G . PASS END=110883571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:27,0 chr1 110883572 . T . PASS END=110883572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 110883573 . G . PASS END=110883587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr1 110883588 . C . PASS END=110883589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110883590 . C . PASS END=110883615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:31,0 chr1 110883616 . A . PASS END=110883616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 110883617 . A . PASS END=110883618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 110883619 . A . PASS END=110883619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 110883620 . T . PASS END=110883638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:30,0 chr1 110883639 . C . PASS END=110883639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 110883640 . T . PASS END=110883642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 110883643 . A . PASS END=110883643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 110883644 . G . PASS END=110883646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 110883647 . T . PASS END=110883667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,914:0,62,255:26,0 chr1 110883668 . G . PASS END=110883668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 110883669 . C . PASS END=110883672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110883673 . T . PASS END=110883674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:22,0 chr1 110883675 . A . PASS END=110883676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 110883677 . A . PASS END=110883677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 110883678 . G . PASS END=110883685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 110883686 . T . PASS END=110883686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 110883687 . G . PASS END=110883691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 110883692 . T . PASS END=110883693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:21:0,56,845:0,56,255:19,0 chr1 110883694 . G . PASS END=110883694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:19,0 chr1 110883695 . G . PASS END=110883721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 110883722 . G . PASS END=110883729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 110883730 . C . PASS END=110883739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,53,255:19,0 chr1 110883740 . A . PASS END=110883742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:24,0 chr1 110883743 . A . PASS END=110883744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 110883745 . A . PASS END=110883745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 110883746 . C . PASS END=110883746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:26,0 chr1 110883747 . A . PASS END=110883747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110883748 . G . PASS END=110883763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 110883764 . C . PASS END=110883764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110883765 . C . PASS END=110883765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 110883766 . T . PASS END=110883770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,895:0,81,255:27,0 chr1 110883771 . C . PASS END=110883828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,900:0,65,255:26,0 chr1 110883829 . C . PASS END=110883829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 110883830 . A . PASS END=110883845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr1 110883846 . G . PASS END=110883882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1019:0,80,255:32,0 chr1 110883883 . A . PASS END=110883884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1139:0,77,255:26,0 chr1 110883885 . G . PASS END=110883888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 110883889 . G . PASS END=110883896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 110883897 . G . PASS END=110883899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 110883900 . C . PASS END=110883901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 110883902 . G . PASS END=110883974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1017:0,84,255:31,0 chr1 110883975 . G . PASS END=110883975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 110883976 . G . PASS END=110883978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110883979 . G . PASS END=110883995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:27:0,74,1086:0,74,255:26,0 chr1 110883996 . C . PASS END=110884001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110884002 . A . PASS END=110884002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:26,0 chr1 110884003 . G . PASS END=110884003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110884004 . T . PASS END=110884016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:24:0,67,970:0,67,255:24,0 chr1 110884017 . A . PASS END=110884017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 110884018 . A . PASS END=110884018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 110884019 . A . PASS END=110884019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:22,0 chr1 110884020 . C . PASS END=110884045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,861:0,61,255:25,0 chr1 110884046 . C . PASS END=110884049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 110884050 . C . PASS END=110884054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 110884055 . A . PASS END=110884056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 110884057 . T . PASS END=110884064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 110884065 . A . PASS END=110884065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 110884066 . G . PASS END=110884068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 110884069 . G . PASS END=110884069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 110884070 . G . PASS END=110884071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110884072 . A . PASS END=110884073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:20,0 chr1 110884074 . C . PASS END=110884083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:28:0,72,1080:0,77,255:26,0 chr1 110884084 . G . PASS END=110884087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110884088 . C . PASS END=110884090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1015:0,71,255:26,0 chr1 110884091 . T . PASS END=110884096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 110884097 . A . PASS END=110884098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110884099 . C . PASS END=110884111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 110884112 . C . PASS END=110884112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 110884113 . T . PASS END=110884117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110884118 . A . PASS END=110884124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 110884125 . T . PASS END=110884126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110884127 . T . PASS END=110884127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 110884128 . C . PASS END=110884145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:30,0 chr1 110884146 . G . PASS END=110884146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 110884147 . G . PASS END=110884247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:31:0,85,1142:0,85,255:40,0 chr1 110884248 . A . PASS END=110884248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:37,0 chr1 110884249 . G . PASS END=110884288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,101,255:39,0 chr1 110884289 . T . PASS END=110884309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,62,255:25,0 chr1 110884310 . C . PASS END=110884310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:19,0 chr1 110884311 . A . PASS END=110884332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,837:0,66,255:22,0 chr1 110884333 . A . PASS END=110884339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,56,255:20,0 chr1 110884340 . T . PASS END=110884340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,2 chr1 110884341 . G . PASS END=110884341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,784:0,6,255:20,2 chr1 110884342 . G . PASS END=110884342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 110884343 . G . PASS END=110884343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110884344 . G . PASS END=110884344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 110884345 . G . PASS END=110884391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,818:0,62,255:26,0 chr1 110884392 . C . PASS END=110884392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 110884393 . A . PASS END=110884394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 110884395 . G . PASS END=110884395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 110884396 . G . PASS END=110884396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 110884397 . C . PASS END=110884398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 110884399 . T . PASS END=110884399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 110884400 . G . PASS END=110884414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 110884415 . C . PASS END=110884415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr1 110884416 . A . PASS END=110884440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1113:0,93,255:32,0 chr1 110884441 . T . PASS END=110884441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 110884442 . G . PASS END=110884451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1297:0,108,255:36,0 chr1 110884452 . G . PASS END=110884452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 110884453 . A . PASS END=110884455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1357:0,108,255:38,0 chr1 110884456 . T . PASS END=110884492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1412:0,87,255:38,0 chr1 110884493 . T C, 50.00 PASS DP=35;MQ=241.50;MQRankSum=1.280;ReadPosRankSum=0.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,22,0:0.629,0.000:35:8,12,0:5,10,0:46:85,0,45,779,457,1236:255,0,255:12,0:5.0000e+01,1.1364e-04,4.7918e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,10,12:6,7,8,14 chr1 110884494 . G . PASS END=110884508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1247:0,86,255:33,0 chr1 110884509 . C . PASS END=110884528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:27:0,75,1125:0,81,255:26,0 chr1 110884529 . T . PASS END=110884529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:24,0 chr1 110884530 . C . PASS END=110884530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110884531 . T . PASS END=110884578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 110884579 . T . PASS END=110884579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:19,0 chr1 110884580 . A . PASS END=110884581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110884582 . C . PASS END=110884591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr1 110884592 . T . PASS END=110884592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110884593 . G . PASS END=110884593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 110884594 . G . PASS END=110884596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110884597 . A . PASS END=110884598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 110884599 . G . PASS END=110884627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:24,0 chr1 110884628 . T . PASS END=110884628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 110884629 . G . PASS END=110884636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 110884637 . G . PASS END=110884637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 110884638 . T . PASS END=110884658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 110884659 . T . PASS END=110884659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 110884660 . C . PASS END=110884663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 110884664 . C . PASS END=110884680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 110884681 . A . PASS END=110884685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,540:0,31,255:14,0 chr1 110884686 . C . PASS END=110884689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 110884690 . T . PASS END=110884691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 110884692 . A . PASS END=110884694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:16,0 chr1 110884695 . A . PASS END=110884695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 110884696 . A . PASS END=110884696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 110884697 . C . PASS END=110884701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:20,0 chr1 110884702 . T . PASS END=110884702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 110884703 . G . PASS END=110884703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 110884704 . T . PASS END=110884704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 110884705 . C . PASS END=110884706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 110884707 . T . PASS END=110884707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 110884708 . A . PASS END=110884708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 110884709 . T . PASS END=110884709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 110884710 . T . PASS END=110884710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,860:0,36,255:23,0 chr1 110884711 . T . PASS END=110884711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 110884712 . A . PASS END=110884725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,854:0,69,255:24,0 chr1 110884726 . C . PASS END=110884726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 110884727 . A . PASS END=110884741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 110884742 . C . PASS END=110884742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 110884743 . C . PASS END=110884765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:26,0 chr1 110884766 . C . PASS END=110884901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:29:0,82,1119:0,82,255:40,0 chr1 110888161 . G . PASS END=110888231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,117,1755:0,148,255:40,0 chr1 110888930 . C . PASS END=110888947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,216,255:40,0 chr1 110888948 . G A, 46.91 PASS DP=98;MQ=167.55;MQRankSum=-0.777;ReadPosRankSum=5.410;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:58,40,0:0.408,0.000:98:34,24,0:24,16,0:46:82,0,50,1328,2030,3358:255,0,255:40,0:4.6908e+01,1.1028e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:31,27,18,22:27,31,28,12 chr1 110888949 . G . PASS END=110888976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:92:0,120,1800:0,223,255:40,0 chr1 110906388 . T . PASS END=110906425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:34:0,92,1327:0,92,255:40,0 chr1 110906426 . C . PASS END=110906426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:41:45:0,41,1443:0,41,255:40,3 chr1 110906427 . A . PASS END=110906427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:30:46:0,30,1506:0,30,255:40,2 chr1 110906428 . A . PASS END=110906535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:36:0,95,1349:0,95,255:40,0 chr1 110918057 . T . PASS END=110918173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:28:0,84,1039:0,84,255:40,0 chr1 110919572 . C . PASS END=110919572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 110919573 . A . PASS END=110919573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 110919574 . G . PASS END=110919574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 110919575 . T . PASS END=110919580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 110919581 . C . PASS END=110919582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,992:0,68,255:26,0 chr1 110919583 . G . PASS END=110919618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,981:0,84,255:29,0 chr1 110919619 . A . PASS END=110919619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,790:0,70,255:28,0 chr1 110919620 . G . PASS END=110919783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1102:0,87,255:40,0 chr1 110921475 . C . PASS END=110921973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:32:0,90,1194:0,92,255:40,0 chr1 110921974 . G . PASS END=110921976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 110921977 . T . PASS END=110921978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:29,0 chr1 110923604 . C . PASS END=110923749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:38:0,81,1215:0,81,255:40,0 chr1 110923750 . A . PASS END=110923751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 110923752 . A . PASS END=110923752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 110923753 . G . PASS END=110923760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,80,255:26,0 chr1 110923761 . C . PASS END=110923761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:24,0 chr1 110923762 . A . PASS END=110923762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 110923763 . A . PASS END=110923763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:24,0 chr1 110923764 . A . PASS END=110923765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 110924274 . C . PASS END=110924417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:48:0,106,1710:0,106,255:40,0 chr1 110925456 . C . PASS END=110925588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:66:0,120,1800:0,196,255:40,0 chr1 110931859 . C . PASS END=110931923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,103,1390:0,103,255:40,0 chr1 110931924 . C . PASS END=110931925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,7:51:14:50:0,14,1443:0,14,255:36,0 chr1 110931926 . T . PASS END=110931927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 110931928 . C . PASS END=110931928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1410:0,66,255:37,0 chr1 110931929 . C . PASS END=110931945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:39:0,82,1451:0,82,255:40,0 chr1 110944145 . T . PASS END=110944205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:47:0,113,1800:0,113,255:40,0 chr1 110946541 . C . PASS END=110946542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1097:0,90,255:31,0 chr1 110946543 . A . PASS END=110946543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 110946544 . T . PASS END=110946544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:31,0 chr1 110946545 . T . PASS END=110946545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 110946546 . A . PASS END=110946558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1180:0,86,255:35,0 chr1 110946559 . C . PASS END=110946559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:34,0 chr1 110946560 . A . PASS END=110946611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1283:0,81,255:40,0 chr1 110946612 . T . PASS END=110946612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:31,0 chr1 110946613 . A . PASS END=110946631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,82,255:34,0 chr1 110946632 . C . PASS END=110946632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:28,0 chr1 110946633 . A . PASS END=110946634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1225:0,86,255:29,0 chr1 110946635 . G . PASS END=110946645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1007:0,73,255:28,0 chr1 110946646 . A . PASS END=110946646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:20,0 chr1 110946647 . G . PASS END=110946648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:21,0 chr1 110946649 . G . PASS END=110946649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:19,0 chr1 110946650 . T . PASS END=110946655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:21,0 chr1 110946656 . G . PASS END=110946656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:19,0 chr1 110946657 . G . PASS END=110946658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr1 110948940 . A . PASS END=110949001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,113,1551:0,113,255:40,0 chr1 110949655 . C . PASS END=110949682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,105,1635:0,105,255:40,0 chr1 110949683 . A . PASS END=110949686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,143,255:40,0 chr1 110950208 . G . PASS END=110950213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,639:0,41,255:19,0 chr1 110950214 . T . PASS END=110950214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 110950215 . C . PASS END=110950222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 110950223 . T . PASS END=110950223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:24,0 chr1 110950224 . G . PASS END=110950235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:26,0 chr1 110950236 . C . PASS END=110950237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 110950238 . T . PASS END=110950238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 110950239 . C . PASS END=110950251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:32,0 chr1 110950252 . C . PASS END=110950252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 110950253 . G . PASS END=110950301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1128:0,87,255:36,0 chr1 110950302 . A . PASS END=110950302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 110950303 . G . PASS END=110950336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1280:0,87,255:37,0 chr1 110950337 . C . PASS END=110950337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1019:0,62,255:28,0 chr1 110950338 . G . PASS END=110950339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 110950340 . A . PASS END=110950341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:43:30:0,43,1030:0,43,255:27,0 chr1 110950342 . C . PASS END=110950345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 110950346 . G . PASS END=110950347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 110950348 . C . PASS END=110950350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 110950351 . C . PASS END=110950351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 110950352 . A . PASS END=110950353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1032:0,87,255:29,0 chr1 110950354 . A . PASS END=110950357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 110950358 . A . PASS END=110950358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:23,0 chr1 110950359 . C . PASS END=110950366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,73,255:26,0 chr1 110950367 . A . PASS END=110950367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110950368 . T . PASS END=110950400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 110950401 . A . PASS END=110950401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 110950402 . C . PASS END=110950402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 110950403 . A . PASS END=110950403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:19,0 chr1 110950404 . T . PASS END=110950409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 110950410 . C . PASS END=110950410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 110950411 . G . PASS END=110950411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 110950412 . C . PASS END=110950413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 110950414 . T . PASS END=110950414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 110950415 . C . PASS END=110950436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 110950437 . G . PASS END=110950438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 110950439 . C T, 49.84 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=0.694;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:6,5,0:4,4,0:48:85,0,50,285,358,643:255,0,255:7,0:4.9839e+01,6.6786e-05,5.3000e+01,2.8508e+02,3.9241e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,4,5:5,5,6,3 chr1 110950440 . T . PASS END=110950443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 110950444 . G . PASS END=110950476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:19,0 chr1 110950477 . A . PASS END=110950477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:14,0 chr1 110950478 . C . PASS END=110950484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 110950485 . C . PASS END=110950488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 110993839 . A . PASS END=110993910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,114,1710:0,133,255:40,0 chr1 110996583 . G . PASS END=110996592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 110996593 . G . PASS END=110996610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:31,0 chr1 110996611 . C . PASS END=110996611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1113:0,60,255:30,0 chr1 110996612 . A . PASS END=110996614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr1 110996615 . C . PASS END=110996636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1309:0,105,255:36,0 chr1 110996637 . T . PASS END=110996637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr1 110996638 . G . PASS END=110996651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:35,0 chr1 110996652 . C T, 46.11 PASS DP=37;MQ=250.00;MQRankSum=4.981;ReadPosRankSum=1.671;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,14,0:0.389,0.000:36:14,6,0:8,8,0:45:81,0,50,501,779,1280:255,0,255:19,0:4.6109e+01,1.2814e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,6,8:10,12,8,6 chr1 110996653 . G . PASS END=110996678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 110996679 . G . PASS END=110996680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110996681 . C . PASS END=110996682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110996683 . A . PASS END=110996686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110996687 . G . PASS END=110996687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 110996688 . T . PASS END=110996689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 110996690 . C . PASS END=110996690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 110996691 . C . PASS END=110996700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 110996701 . G . PASS END=110996708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,62,255:18,0 chr1 110998854 . G . PASS END=110998864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 110998865 . C . PASS END=110998865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 110998866 . A . PASS END=110998968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1215:0,84,255:40,0 chr1 110998969 . T . PASS END=110998969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 110998970 . T . PASS END=110998973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111059874 . T . PASS END=111060212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:31:0,81,1065:0,83,255:40,0 chr1 111060213 . A . PASS END=111060215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 111060216 . C . PASS END=111060436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1164:0,83,255:40,0 chr1 111060437 . G . PASS END=111060437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:36,0 chr1 111060438 . G . PASS END=111060553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:34:0,88,1227:0,88,255:39,0 chr1 111060554 . G . PASS END=111060554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:31,0 chr1 111060555 . C . PASS END=111060581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1210:0,86,255:35,0 chr1 111060582 . A . PASS END=111060582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:34,0 chr1 111060583 . G . PASS END=111060598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1319:0,84,255:36,0 chr1 111060599 . A . PASS END=111060599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:32,0 chr1 111060600 . A . PASS END=111060631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1202:0,83,255:33,0 chr1 111060632 . T . PASS END=111060651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1072:0,90,255:32,0 chr1 111060652 . G . PASS END=111060652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 111060653 . G . PASS END=111060668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1192:0,83,255:31,0 chr1 111060669 . T C, 149.32 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:99:187,102,0,1302,102,1302:255,102,0:0,0:1.4932e+02,9.9325e+01,0.0000e+00,4.5000e+02,1.3409e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,16:0,0,21,13 chr1 111060670 . A . PASS END=111060698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1318:0,92,255:36,0 chr1 111060699 . T . PASS END=111060699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1045:0,46,255:28,0 chr1 111060700 . G . PASS END=111060706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1111:0,82,255:32,0 chr1 111060707 . G . PASS END=111060714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1241:0,86,255:31,0 chr1 111060715 . A . PASS END=111060716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1034:0,66,255:29,0 chr1 111060717 . G . PASS END=111060739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1225:0,86,255:32,0 chr1 111060740 . A . PASS END=111060740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1066:0,60,255:30,0 chr1 111060741 . C . PASS END=111060973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1284:0,84,255:40,0 chr1 111060974 . G . PASS END=111061010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:41:0,110,1528:0,110,255:40,0 chr1 111061011 . C A, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=1.851;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,26,0:0.605,0.000:43:8,18,0:9,8,0:47:85,0,46,930,608,1538:255,0,255:16,0:5.0000e+01,9.6038e-05,4.9165e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,12,14:10,7,18,8 chr1 111061012 . C . PASS END=111061061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:32:0,80,1139:0,80,255:40,0 chr1 111061062 . T C, 158.34 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,23,0:0,14,0:108:196,111,0,296,296,296:255,111,0:0,0:1.5834e+02,1.0834e+02,0.0000e+00,2.9311e+02,3.2788e+02,2.9612e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,24:0,0,19,18 chr1 111061063 . T . PASS END=111061099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1115:0,88,255:37,0 chr1 111061100 . G . PASS END=111061177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1106:0,83,255:34,0 chr1 111061178 . G . PASS END=111061178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr1 111061179 . C . PASS END=111061205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1185:0,80,255:32,0 chr1 111061206 . T . PASS END=111061206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr1 111061207 . C . PASS END=111061215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1178:0,83,255:30,0 chr1 111061216 . T . PASS END=111061216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 111061217 . T . PASS END=111061225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 111061226 . C . PASS END=111061268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,812:0,61,255:26,0 chr1 111061269 . G . PASS END=111061273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111061274 . A . PASS END=111061275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 111061276 . G . PASS END=111061386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1188:0,81,255:38,0 chr1 111061387 . T . PASS END=111061387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1029:0,52,255:29,0 chr1 111061388 . C . PASS END=111061399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1143:0,96,255:32,0 chr1 111061400 . A . PASS END=111061409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,74,255:25,0 chr1 111136515 . T . PASS END=111136550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:93:0,120,1800:0,255,255:40,0 chr1 111144583 . C . PASS END=111144623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1186:0,83,255:40,0 chr1 111144624 . T . PASS END=111144660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:40:0,96,1488:0,96,255:40,0 chr1 111144661 . A G, 47.93 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=2.861;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:10,8,0:16,11,0:47:83,0,50,680,926,1606:255,0,255:25,0:4.7935e+01,9.1637e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,17,10,9:15,11,7,12 chr1 111144662 . T . PASS END=111144698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:46:0,98,1717:0,98,255:40,0 chr1 111144699 . C . PASS END=111144792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,107,1466:0,107,255:40,0 chr1 111145905 . T . PASS END=111145923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1344:0,101,255:39,0 chr1 111145924 . T . PASS END=111145924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1345:0,78,255:38,0 chr1 111145925 . T . PASS END=111146109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:95:39:0,95,1396:0,95,255:40,0 chr1 111146110 . A . PASS END=111146110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:71:53:0,71,1698:0,71,255:40,0 chr1 111146111 . C . PASS END=111146161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:40:0,90,1530:0,90,255:40,0 chr1 111146162 . A . PASS END=111146162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1295:0,75,255:33,0 chr1 111146163 . G . PASS END=111146280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1265:0,84,255:38,0 chr1 111146281 . A . PASS END=111146281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:35,0 chr1 111146282 . C . PASS END=111146285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1346:0,81,255:36,0 chr1 111146286 . T . PASS END=111146286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:33,0 chr1 111146287 . G . PASS END=111146287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 111146288 . T . PASS END=111146289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:33,0 chr1 111146290 . A . PASS END=111146414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1185:0,86,255:38,0 chr1 111146415 . G . PASS END=111146415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1215:0,75,255:33,0 chr1 111146416 . A . PASS END=111146477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,84,255:36,0 chr1 111146478 . T . PASS END=111146478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 111146479 . C . PASS END=111146482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 111146483 . A . PASS END=111146483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 111146484 . C . PASS END=111146484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 111146485 . A . PASS END=111146486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:26,0 chr1 111146487 . C . PASS END=111146488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111146489 . T . PASS END=111146489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 111146490 . G . PASS END=111146490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 111146491 . A . PASS END=111146491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 111146492 . A . PASS END=111146504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 111146505 . T . PASS END=111146505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:26,0 chr1 111146506 . C . PASS END=111146511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 111146512 . A . PASS END=111146534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 111146535 . C . PASS END=111146535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 111146536 . A . PASS END=111146537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 111146538 . T . PASS END=111146538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 111146539 . G . PASS END=111146543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 111146544 . G . PASS END=111146544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 111146545 . G . PASS END=111146552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 111146553 . G . PASS END=111146553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:19,0 chr1 111146554 . C . PASS END=111146554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 111146555 . C . PASS END=111146555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 111146556 . T . PASS END=111146561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 111146562 . A . PASS END=111146580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 111146581 . G . PASS END=111146581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 111146582 . C . PASS END=111146583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 111146584 . A . PASS END=111146584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 111146585 . A . PASS END=111146594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,43,255:15,0 chr1 111146595 . C . PASS END=111146596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 111146597 . G . PASS END=111146604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:16,0 chr1 111146605 . A . PASS END=111146605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 111146606 . A . PASS END=111146619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 111146620 . G . PASS END=111146625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 111146626 . A . PASS END=111146626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 111146627 . T . PASS END=111146636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,798:0,63,255:25,0 chr1 111146637 . G . PASS END=111146637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111146638 . T . PASS END=111146638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 111146639 . T . PASS END=111147141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:28:0,81,1011:0,83,255:40,0 chr1 111147142 . A . PASS END=111147142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:29,0 chr1 111147143 . T . PASS END=111147144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:34:0,93,1395:0,102,255:31,0 chr1 111147145 . G . PASS END=111147145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1143:0,71,255:30,0 chr1 111147146 . C . PASS END=111147161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1164:0,83,255:31,0 chr1 111147162 . G . PASS END=111147173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 111147174 . A . PASS END=111147175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111147176 . A . PASS END=111147176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 111147177 . G . PASS END=111147180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111147181 . T . PASS END=111147181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,842:0,64,255:26,0 chr1 111147182 . C . PASS END=111147182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111147183 . A . PASS END=111147184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1015:0,71,255:29,0 chr1 111147185 . T . PASS END=111147194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 111147195 . G . PASS END=111147196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 111147197 . C . PASS END=111147198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 111147199 . A . PASS END=111147199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 111147200 . A . PASS END=111147202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 111147203 . A . PASS END=111147203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 111147204 . C . PASS END=111147222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 111147223 . T . PASS END=111147241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:27:0,72,1070:0,74,255:26,0 chr1 111147242 . G . PASS END=111147242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr1 111147243 . A . PASS END=111147253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 111147254 . A . PASS END=111147288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,856:0,61,255:26,0 chr1 111147289 . A . PASS END=111147289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111147290 . T . PASS END=111147318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,68,255:26,0 chr1 111147319 . T . PASS END=111147319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:21,0 chr1 111147320 . G . PASS END=111147333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 111147334 . T . PASS END=111147334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 111147335 . C . PASS END=111147335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 111147336 . A . PASS END=111147336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 111147337 . T . PASS END=111147347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 111147348 . T . PASS END=111147348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 111147349 . G . PASS END=111147349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 111147350 . G . PASS END=111147350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 111147351 . G . PASS END=111147352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 111147353 . G . PASS END=111147353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 111147354 . C . PASS END=111147358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 111147359 . G . PASS END=111147359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 111147360 . G . PASS END=111147394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 111147395 . C . PASS END=111147395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 111147396 . C . PASS END=111147397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 111147398 . C . PASS END=111147404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,631:0,43,255:18,0 chr1 111215704 . T . PASS END=111216106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:38:0,98,1530:0,98,255:40,0 chr1 111216107 . A . PASS END=111216107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1310:0,67,255:31,0 chr1 111216108 . T . PASS END=111216175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1296:0,81,255:39,0 chr1 111216176 . G . PASS END=111216176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr1 111216177 . C . PASS END=111216190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1185:0,95,255:35,0 chr1 111216191 . C . PASS END=111216191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 111216192 . T . PASS END=111216217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1234:0,84,255:35,0 chr1 111216218 . A . PASS END=111216218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:33,0 chr1 111216219 . G . PASS END=111216267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1100:0,89,255:36,0 chr1 111216268 . C . PASS END=111216268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:31,0 chr1 111216269 . C . PASS END=111216279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1156:0,83,255:31,0 chr1 111216280 . C . PASS END=111216283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 111216284 . C . PASS END=111216286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr1 111216287 . T . PASS END=111216287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1099:0,71,255:26,0 chr1 111216288 . T . PASS END=111216294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:29,0 chr1 111216295 . G . PASS END=111216295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr1 111216296 . C . PASS END=111216299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 111216300 . A . PASS END=111216300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 111216301 . C . PASS END=111216305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111216306 . T . PASS END=111216335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,939:0,64,255:26,0 chr1 111216336 . T . PASS END=111216336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 111216337 . G . PASS END=111216348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 111216349 . G . PASS END=111216349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 111216350 . G . PASS END=111216371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 111216372 . C . PASS END=111216372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 111216373 . A . PASS END=111216374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 111216375 . T . PASS END=111216375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 111216376 . G . PASS END=111216389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 111216390 . C . PASS END=111216392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 111216393 . G . PASS END=111216395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 111216396 . C . PASS END=111216397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 111216398 . G . PASS END=111216434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:23,0 chr1 111216435 . T . PASS END=111216435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 111216436 . G . PASS END=111216438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 111216439 . G . PASS END=111216439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 111216440 . A . PASS END=111216462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,695:0,63,255:22,0 chr1 111216463 . G . PASS END=111216497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,615:0,46,255:19,0 chr1 111216498 . C . PASS END=111216500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 111216501 . G . PASS END=111216511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 111216512 . G . PASS END=111216512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:16,0 chr1 111216513 . A . PASS END=111216514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 111216515 . A . PASS END=111216515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 111216516 . A . PASS END=111216544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,659:0,41,255:19,0 chr1 111216545 . A . PASS END=111216545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 111216546 . A . PASS END=111216549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 111216550 . G . PASS END=111216550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 111216551 . G . PASS END=111216631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:19,0 chr1 111216632 . G . PASS END=111216668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,344:0,33,255:13,0 chr1 111216669 . T . PASS END=111216669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 111216670 . C . PASS END=111216675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 111216676 . G . PASS END=111216676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 111216677 . C . PASS END=111216680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 111216681 . A . PASS END=111216681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 111216682 . G . PASS END=111216683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 111216684 . T . PASS END=111216700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 111216701 . A . PASS END=111216707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 111216708 . G . PASS END=111216709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 111216710 . A . PASS END=111216710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 111216711 . C . PASS END=111216716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 111216717 . C . PASS END=111216718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 111216719 . A . PASS END=111216721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 111216722 . G . PASS END=111216724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 111216725 . A . PASS END=111216727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:22:11:0,22,382:0,22,255:10,0 chr1 111216728 . C . PASS END=111216775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr1 111216776 . T . PASS END=111216776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 111216777 . G . PASS END=111216777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 111216778 . G . PASS END=111216798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 111216799 . C . PASS END=111216799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 111216800 . A . PASS END=111216801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr1 111216802 . G . PASS END=111216840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 111216841 . G . PASS END=111216842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 111216843 . A . PASS END=111216843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 111216844 . C . PASS END=111216845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 111216846 . T . PASS END=111216846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 111216847 . C . PASS END=111216850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 111216851 . A . PASS END=111216851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 111216852 . T . PASS END=111216852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 111216853 . G . PASS END=111216853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 111216854 . G . PASS END=111216854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 111216855 . C . PASS END=111216855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 111216856 . C . PASS END=111216859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 111216860 . T . PASS END=111216860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 111216861 . C . PASS END=111216861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 111216862 . G . PASS END=111216862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 111216863 . C . PASS END=111216864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 111216865 . C . PASS END=111216866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 111216867 . G . PASS END=111216877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,629:0,40,255:19,0 chr1 111216878 . C . PASS END=111216881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 111216882 . T . PASS END=111216882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 111216883 . C . PASS END=111216884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 111216885 . C . PASS END=111216886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111216887 . T . PASS END=111216888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 111216889 . G . PASS END=111216900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 111216901 . G . PASS END=111216902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 111216903 . T . PASS END=111216903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 111216904 . G . PASS END=111216940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,679:0,60,255:21,0 chr1 111216941 . T . PASS END=111216941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 111216942 . G . PASS END=111216944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 111216945 . A . PASS END=111216945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 111216946 . G . PASS END=111216964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 111216965 . A . PASS END=111216967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 111216968 . C . PASS END=111217012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1008:0,75,255:26,0 chr1 111217013 . A . PASS END=111217016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111217017 . A . PASS END=111217039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 111217040 . C . PASS END=111217043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 111217044 . G . PASS END=111217045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 111217046 . A . PASS END=111217086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,450:0,42,255:19,0 chr1 111217087 . G . PASS END=111217093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 111217094 . A . PASS END=111217102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 111217103 . A . PASS END=111217103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 111217104 . T . PASS END=111217121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 111217122 . C . PASS END=111217122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 111217123 . C . PASS END=111217126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 111217127 . C . PASS END=111217147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,398:0,33,255:12,0 chr1 111217148 . G . LowGQ END=111217148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr1 111217149 . C . PASS END=111217149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 111217150 . C . LowGQ END=111217152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:13,0 chr1 111217153 . C . PASS END=111217153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr1 111217154 . A . PASS END=111217154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:13,0 chr1 111217155 . G . PASS END=111217155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 111217156 . T . PASS END=111217156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:11,0 chr1 111217157 . G . PASS END=111217157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 111217158 . A . PASS END=111217160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,474:0,6,255:12,0 chr1 111217161 . G . PASS END=111217161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 111217162 . C . PASS END=111217162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:11,0 chr1 111217163 . G . PASS END=111217209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,421:0,39,255:13,0 chr1 111217210 . A . PASS END=111217224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 111217225 . A . PASS END=111217225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 111217226 . C . PASS END=111217243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 111217244 . T . PASS END=111217244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 111217245 . C . PASS END=111217245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 111217246 . C . PASS END=111217247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:16,0 chr1 111217248 . G . PASS END=111217248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 111217249 . C . PASS END=111217251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 111217252 . G . PASS END=111217285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,607:0,48,255:17,0 chr1 111217286 . A . PASS END=111217299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 111217300 . G . PASS END=111217301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 111217302 . C . PASS END=111217302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 111217303 . G . PASS END=111217303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr1 111217304 . G . PASS END=111217319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 111217320 . G . PASS END=111217363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:23:9:0,23,319:0,23,255:9,0 chr1 111217364 . G . PASS END=111217408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr1 111217409 . A . PASS END=111217431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,70:0,6,70:2,0 chr1 111420257 . T . PASS END=111420307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,157,255:40,0 chr1 111434031 . A . PASS END=111434093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:90:0,120,1800:0,227,255:40,0 chr1 111434907 . A . PASS END=111435152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:32:0,81,1186:0,83,255:40,0 chr1 111435153 . T . PASS END=111435155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:30:0,75,1125:0,83,255:25,0 chr1 111436949 . T . PASS END=111437023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,161,255:40,0 chr1 111437582 . C . PASS END=111437583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 111437584 . G . PASS END=111437584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111437585 . A . PASS END=111437585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 111437586 . A . PASS END=111437588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 111437589 . A . PASS END=111437589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 111437590 . G . PASS END=111437674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1094:0,84,255:36,0 chr1 111437675 . T . PASS END=111437677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 111439275 . C . PASS END=111439355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,83,255:40,0 chr1 111440431 . G . PASS END=111440514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:60:0,120,1800:0,153,255:40,0 chr1 111441746 . G . PASS END=111441791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:92:36:0,92,1288:0,92,255:40,0 chr1 111441792 . A . PASS END=111441817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,109,1800:0,109,255:40,0 chr1 111490581 . T . PASS END=111491021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:82:37:0,82,1357:0,82,255:40,0 chr1 111492473 . C . PASS END=111492473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 111492474 . T . PASS END=111492483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,864:0,69,255:26,0 chr1 111492484 . C . PASS END=111492487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr1 111492488 . T . PASS END=111492489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 111492490 . C . PASS END=111492491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 111492492 . T . PASS END=111492492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 111492493 . T . PASS END=111492494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 111492495 . A . PASS END=111492495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 111492496 . C . PASS END=111492501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1288:0,105,255:35,0 chr1 111492502 . A . PASS END=111492502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:70:35:0,70,783:0,70,255:33,0 chr1 111492503 . C . PASS END=111492507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1258:0,91,255:38,0 chr1 111492508 . T . PASS END=111492508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1198:0,51,255:35,0 chr1 111492509 . C . PASS END=111492593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:40:0,81,1352:0,81,255:40,0 chr1 111492594 . C . LowGQ END=111492594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,13:67:0:67:0,0,1499:15,0,255:40,0 chr1 111492595 . A . PASS END=111492717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:34:0,87,1280:0,88,255:40,0 chr1 111492718 . C . PASS END=111492740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:26:0,61,862:0,61,255:26,0 chr1 111492741 . T . PASS END=111492742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 111492743 . G . PASS END=111492745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 111493910 . C . PASS END=111494156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1064:0,87,255:40,0 chr1 111494157 . G . PASS END=111494193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,120,1800:0,124,255:40,0 chr1 111494194 . C T, 49.26 PASS DP=58;MQ=250.00;MQRankSum=6.449;ReadPosRankSum=1.690;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,26,0:0.456,0.000:57:14,12,0:17,14,0:48:84,0,50,844,1051,1895:255,0,255:27,0:4.9257e+01,7.3258e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,16,10:13,18,18,8 chr1 111494195 . C . PASS END=111494231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,160,255:40,0 chr1 111494232 . T . PASS END=111494949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:31:0,84,1156:0,86,255:40,0 chr1 111494950 . G . PASS END=111494950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 111494951 . T . PASS END=111494951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 111494952 . A . PASS END=111494952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 111494953 . A . PASS END=111495437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:86:32:0,86,1071:0,86,255:40,0 chr1 111506243 . C . PASS END=111506245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 111506246 . C . PASS END=111506310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1047:0,84,255:32,0 chr1 111660782 . T . PASS END=111660889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,104,1397:0,104,255:40,0 chr1 111661427 . C . PASS END=111661450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,221,255:40,0 chr1 111661451 . G . PASS END=111661490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:82:0,120,1800:0,200,255:40,0 chr1 111661491 . G . PASS END=111661519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:67:0,120,1800:0,154,255:40,0 chr1 111662493 . T . PASS END=111662493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,114,1658:0,114,255:40,0 chr1 111662499 . T . PASS END=111662581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,150,255:40,0 chr1 111663138 . T . PASS END=111663315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:86:32:0,86,1194:0,86,255:40,0 chr1 111663317 . T . PASS END=111663317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 111665238 . C . PASS END=111665258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,200,255:40,0 chr1 111665259 . G . PASS END=111665265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:85:0,120,1800:0,171,255:40,0 chr1 111667364 . C . PASS END=111667503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:93:42:0,93,1501:0,93,255:40,0 chr1 111668849 . A . PASS END=111668916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:66:0,120,1800:0,181,255:40,0 chr1 111674046 . C . PASS END=111674050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:32,0 chr1 111674051 . A . PASS END=111674051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:31,0 chr1 111674052 . T . PASS END=111674052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 111674053 . A . PASS END=111674053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr1 111674054 . A . PASS END=111674176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:82:33:0,82,1014:0,82,255:40,0 chr1 111690337 . A . PASS END=111690337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 111690338 . T . PASS END=111690355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:33,0 chr1 111690356 . C . PASS END=111690356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr1 111690357 . A . PASS END=111690589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:83:33:0,83,1172:0,83,255:40,0 chr1 111690590 . C . PASS END=111690626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:39:0,87,1385:0,87,255:40,0 chr1 111690627 . C A, 49.31 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=3.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,17,0:0.447,0.000:38:9,8,0:12,9,0:47:84,0,47,184,184,184:255,0,255:20,0:4.9311e+01,9.4226e-05,5.0000e+01,1.8408e+02,2.1885e+02,1.8709e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,14,8,9:9,12,11,6 chr1 111690628 . T . PASS END=111690649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1186:0,86,255:36,0 chr1 111690650 . T . PASS END=111690650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1121:0,71,255:27,0 chr1 111690651 . C . PASS END=111690657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:29,0 chr1 111690658 . C . PASS END=111690664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,77,255:25,0 chr1 111690665 . C . PASS END=111690675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:25,0 chr1 111702002 . G . PASS END=111702012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:26,0 chr1 111702013 . G . PASS END=111702094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:28:0,83,1055:0,83,255:40,0 chr1 111702095 . A . PASS END=111702120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,900:0,63,255:26,0 chr1 111702121 . T . PASS END=111702121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 111702122 . G . PASS END=111702125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 111702126 . A . PASS END=111702128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111702129 . G . PASS END=111702129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 111702130 . C . PASS END=111702139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 111702140 . C . PASS END=111702147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:13,0 chr1 111702148 . A . PASS END=111702149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:16:0,27,405:0,48,255:9,0 chr1 111703777 . T . PASS END=111703918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:90:52:0,90,1590:0,90,255:40,2 chr1 111709728 . A . PASS END=111709812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:98:38:0,98,1349:0,98,255:40,0 chr1 111717501 . A . PASS END=111717585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,188,255:40,0 chr1 111724809 . A . PASS END=111724940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:94:37:0,94,1250:0,94,255:40,0 chr1 111725421 . G . PASS END=111725579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:54:0,120,1800:0,139,255:40,0 chr1 111726084 . G . PASS END=111726175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,142,255:40,0 chr1 111726176 . T . PASS END=111726209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,170,255:40,0 chr1 111726813 . G . PASS END=111726932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:40:0,103,1322:0,103,255:40,0 chr1 111730227 . T . PASS END=111730303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:105:0,120,1800:0,255,255:40,0 chr1 111730753 . C . PASS END=111730767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,902:0,75,255:26,0 chr1 111730768 . T . PASS END=111730768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111730769 . G . PASS END=111730769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr1 111730770 . C . PASS END=111730773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1147:0,87,255:30,0 chr1 111730774 . T . PASS END=111730775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 111730776 . T . PASS END=111730786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1066:0,80,255:32,0 chr1 111730787 . G . PASS END=111730787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,992:0,46,255:28,0 chr1 111730788 . A . PASS END=111730932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:33:0,83,1114:0,83,255:40,0 chr1 111730933 . C . PASS END=111730933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 111730934 . A . PASS END=111730958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,92,255:35,0 chr1 111730959 . G . PASS END=111730959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 111730960 . G . PASS END=111730961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 111730962 . C . PASS END=111730966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 111730967 . A . PASS END=111730967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1147:0,47,255:25,0 chr1 111730968 . A . PASS END=111730975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:26,0 chr1 111730976 . G . PASS END=111730976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 111730977 . T . PASS END=111730977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:26,0 chr1 111730978 . T . PASS END=111730978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 111730979 . G . PASS END=111730979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 111730980 . A . PASS END=111730981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,902:0,81,255:27,0 chr1 111730982 . T . PASS END=111730992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:25,0 chr1 111731324 . T . PASS END=111731408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:52:0,120,1800:0,141,255:40,0 chr1 111731834 . C . PASS END=111731875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,114,1710:0,120,255:40,0 chr1 111734762 . C . PASS END=111734763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 111734764 . C . PASS END=111734891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1178:0,83,255:40,0 chr1 111734892 . A . PASS END=111734914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr1 111734915 . A . PASS END=111734939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 111737200 . C . PASS END=111737220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,108,1717:0,108,255:40,0 chr1 111737221 . A . PASS END=111737348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:36:0,87,1305:0,98,255:40,0 chr1 111738430 . T . PASS END=111738450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:80:42:0,80,1469:0,80,255:40,0 chr1 111738538 . C . PASS END=111738582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,901:0,64,255:26,0 chr1 111738583 . C . PASS END=111738601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 111738602 . G . PASS END=111738602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 111738603 . C . PASS END=111738617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 111738618 . G . PASS END=111738618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 111738619 . C . PASS END=111738620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111738621 . T . PASS END=111738621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 111738622 . G . PASS END=111738622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111738623 . A . PASS END=111738623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 111738624 . A . PASS END=111738626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111738627 . G . PASS END=111738635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:24,0 chr1 111738636 . C . PASS END=111738638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 111738639 . C . PASS END=111738647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 111738648 . T . PASS END=111738648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 111738649 . C . PASS END=111738659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,669:0,63,255:21,0 chr1 111738660 . T . PASS END=111738660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:20,0 chr1 111738661 . C . PASS END=111738672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 111738673 . C . PASS END=111738678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,776:0,52,255:19,0 chr1 111739798 . C . PASS END=111739798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr1 111739799 . T . PASS END=111739822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1218:0,105,255:37,0 chr1 111739823 . A . PASS END=111739875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1273:0,93,255:38,0 chr1 111740328 . C . PASS END=111740340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,690:0,51,255:18,0 chr1 111740341 . G . PASS END=111740344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 111740345 . C G, 49.18 PASS DP=21;MQ=248.78;MQRankSum=2.949;ReadPosRankSum=1.812;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,9,0:0.429,0.000:21:9,5,0:3,4,0:48:84,0,50,322,400,722:255,0,255:12,0:4.9176e+01,7.4293e-05,5.3000e+01,3.2169e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,6,3:9,3,4,5 chr1 111740346 . G . PASS END=111740350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 111740351 . A . PASS END=111740351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 111740352 . A . PASS END=111740382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:26,0 chr1 111740383 . G . PASS END=111740407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:24,0 chr1 111740408 . A . PASS END=111740409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 111740410 . G . PASS END=111740457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,911:0,64,255:26,0 chr1 111740458 . G . PASS END=111740503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1049:0,84,255:33,0 chr1 111740504 . A . PASS END=111740504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 111740505 . C . PASS END=111740514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 111740515 . G . PASS END=111740515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 111740516 . A . PASS END=111740516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr1 111740517 . A . PASS END=111740521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 111740522 . C . PASS END=111740522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 111740523 . A . PASS END=111740570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1123:0,90,255:38,0 chr1 111740571 . T . PASS END=111740571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:34,0 chr1 111740572 . G . PASS END=111740610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,86,255:36,0 chr1 111740611 . C . PASS END=111740611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 111741252 . C . PASS END=111741253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 111741254 . G . PASS END=111741258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 111741259 . A . PASS END=111741259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 111741260 . C . PASS END=111741263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1141:0,90,255:36,0 chr1 111741264 . G . PASS END=111741264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr1 111741265 . T . PASS END=111741364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:36:0,82,1388:0,82,255:40,0 chr1 111742245 . C . PASS END=111742247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 111742248 . G . PASS END=111742248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 111742249 . G . PASS END=111742252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 111742253 . A . PASS END=111742253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 111742254 . T . PASS END=111742255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 111742256 . G . PASS END=111742256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 111742257 . G . PASS END=111742266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 111742267 . A . PASS END=111742268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 111742269 . A . PASS END=111742270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,956:0,68,255:27,0 chr1 111742271 . G . PASS END=111742274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 111742275 . G . PASS END=111742276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1063:0,74,255:29,0 chr1 111742277 . A . PASS END=111742279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 111742280 . C . PASS END=111742280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 111742281 . A . PASS END=111742294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:33,0 chr1 111742295 . T . PASS END=111742295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:31,0 chr1 111742296 . C . PASS END=111742347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,880:0,81,255:34,0 chr1 111742348 . A . PASS END=111742348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:28,0 chr1 111742349 . A . PASS END=111742358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1188:0,85,255:32,0 chr1 111742359 . A . PASS END=111742359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1137:0,66,255:28,0 chr1 111742360 . G . PASS END=111742372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr1 111742373 . C . PASS END=111742380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 111742381 . G . PASS END=111742381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:24,0 chr1 111742382 . G . PASS END=111742383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:25,0 chr1 111742384 . T . PASS END=111742384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 111742385 . C . PASS END=111742392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:25,0 chr1 111742393 . G . PASS END=111742393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,910:0,50,255:22,0 chr1 111742394 . C . PASS END=111742394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 111742395 . T . PASS END=111742397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 111742398 . C . PASS END=111742400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 111742401 . T . PASS END=111742401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,701:0,55,255:19,0 chr1 111742402 . G . PASS END=111742402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 111742403 . A . PASS END=111742419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:18:0,42,630:0,49,255:19,0 chr1 111742420 . C . PASS END=111742420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:15,0 chr1 111743015 . C . PASS END=111743081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1275:0,87,255:39,0 chr1 111745017 . C . PASS END=111745067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:82:0,120,1800:0,196,255:40,0 chr1 111746918 . C . PASS END=111746924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 111746925 . G . PASS END=111746925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 111746926 . C . PASS END=111746930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 111746931 . C . PASS END=111746931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 111746932 . T . PASS END=111746936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,235:8,0 chr1 111746937 . T . PASS END=111746937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 111746938 . C . PASS END=111746938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 111746939 . T . LowGQ END=111746939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,192:9,0,201:6,0 chr1 111746940 . C . PASS END=111746942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 111746943 . G . LowGQ END=111746943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,257:4,0,255:8,0 chr1 111746944 . C . PASS END=111746945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 111746946 . G . PASS END=111746946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 111746947 . G . PASS END=111746948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 111746949 . T . PASS END=111746949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 111746950 . C . PASS END=111746954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 111746955 . G . LowGQ END=111746955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:8,0 chr1 111746956 . C . PASS END=111746957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 111746958 . G . PASS END=111746958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 111746959 . C . PASS END=111746959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 111746960 . G . PASS END=111746961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:11:9:0,11,294:0,11,255:9,0 chr1 111746962 . C . PASS END=111746964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 111746965 . A . PASS END=111746965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 111746966 . G . PASS END=111746966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 111746967 . C . PASS END=111746969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 111746970 . A . PASS END=111746970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:7,0 chr1 111746971 . T . LowGQ END=111746971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:7,0 chr1 111746972 . C . PASS END=111746973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 111746974 . A . LowGQ END=111746974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,272:9,0,255:7,0 chr1 111746975 . T . PASS END=111746975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:6,0 chr1 111770352 . A . PASS END=111770385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:44:0,96,1558:0,96,255:40,0 chr1 111770386 . G . PASS END=111770391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,115,1529:0,115,255:40,0 chr1 111772474 . G . PASS END=111772503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,140,255:40,0 chr1 111773364 . G . PASS END=111773541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,84,255:40,0 chr1 111773542 . G . PASS END=111773543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1203:0,66,255:26,0 chr1 111773544 . C . PASS END=111773545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:27,0 chr1 111773546 . A . PASS END=111773560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr1 111773561 . A . PASS END=111773563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:28,0 chr1 111773564 . A . PASS END=111773564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:27,0 chr1 111773565 . A . PASS END=111773565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr1 111773860 . G . PASS END=111773916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:69:0,120,1800:0,182,255:40,0 chr1 111777529 . G . PASS END=111777536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1189:0,88,255:37,0 chr1 111777537 . C . PASS END=111777537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1219:0,70,255:36,0 chr1 111777538 . T . PASS END=111777679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:83:38:0,83,1305:0,83,255:40,0 chr1 111778261 . G . PASS END=111778266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 111778267 . G . PASS END=111778275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1019:0,68,255:28,0 chr1 111778276 . T . PASS END=111778278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:29,0 chr1 111778279 . C . PASS END=111778353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1189:0,83,255:40,0 chr1 111778354 . G . PASS END=111778354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 111778355 . A . PASS END=111778355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 111778356 . T . PASS END=111778378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:25:0,65,969:0,65,255:26,0 chr1 111778379 . T . PASS END=111778379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 111778380 . G . PASS END=111778384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 111778385 . A . PASS END=111778385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 111778646 . A . PASS END=111778646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,552:0,23,255:14,0 chr1 111778647 . G . PASS END=111778650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:20,0 chr1 111778651 . T . PASS END=111778651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 111778652 . G . PASS END=111778652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 111778653 . G . PASS END=111778653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 111778654 . A . PASS END=111778654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:21,0 chr1 111778655 . T . PASS END=111778655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 111778656 . T . PASS END=111778656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 111778657 . T . PASS END=111778660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr1 111778661 . C . PASS END=111778661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 111778662 . A . PASS END=111778662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 111778663 . A . PASS END=111778663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:22,0 chr1 111778664 . C . PASS END=111778664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 111778665 . C . PASS END=111778680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,820:0,61,255:26,0 chr1 111778681 . T . PASS END=111778691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,987:0,81,255:28,0 chr1 111778692 . T . PASS END=111778692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 111778693 . G . PASS END=111778700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 111778701 . C . PASS END=111778701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 111778702 . C . PASS END=111778718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:30,0 chr1 111778719 . A . PASS END=111778719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:26,0 chr1 111778720 . A . PASS END=111778720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:27,0 chr1 111778721 . C . PASS END=111778721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:26,0 chr1 111778722 . A . PASS END=111778730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 111778731 . A . PASS END=111778758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,806:0,63,255:26,0 chr1 111778759 . G . PASS END=111778760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 111778761 . T . PASS END=111778762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 111778763 . C . PASS END=111778763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 111778764 . T . PASS END=111778765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 111778766 . C . PASS END=111778775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,629:0,43,255:18,0 chr1 111781372 . G . PASS END=111781382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:19,0 chr1 111781383 . G . PASS END=111781383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 111781384 . G . PASS END=111781384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111781385 . G . PASS END=111781387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 111781388 . A . PASS END=111781388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 111781389 . C . PASS END=111781392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 111781393 . A . PASS END=111781393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 111781394 . T . PASS END=111781411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,955:0,75,255:26,0 chr1 111781412 . C . PASS END=111781414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111781415 . A . PASS END=111781415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 111781416 . G . PASS END=111781421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1186:0,90,255:31,0 chr1 111781422 . G . PASS END=111781422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 111781423 . G . PASS END=111781440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:32,0 chr1 111781441 . T . PASS END=111781441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:30,0 chr1 111781442 . A . PASS END=111781488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1177:0,80,255:34,0 chr1 111781489 . C . PASS END=111781489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 111781490 . C . PASS END=111781494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1177:0,80,255:29,0 chr1 111781495 . T . PASS END=111781495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 111781496 . C . PASS END=111781503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:29,0 chr1 111781504 . G . PASS END=111781505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1061:0,71,255:28,0 chr1 111781506 . A . PASS END=111781515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 111781516 . C . PASS END=111781516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 111781517 . C . PASS END=111781517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111781518 . C . PASS END=111781526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 111781527 . G . PASS END=111781532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 111781533 . A . PASS END=111781533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 111781534 . G . PASS END=111781534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 111781535 . G . PASS END=111781554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,914:0,62,255:26,0 chr1 111783949 . A . PASS END=111783956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,809:0,61,255:26,0 chr1 111783957 . G . PASS END=111783966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 111783967 . G . PASS END=111783967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 111783968 . G . PASS END=111783979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1114:0,82,255:33,0 chr1 111783980 . C . PASS END=111783980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1147:0,52,255:30,0 chr1 111783981 . G A, 48.19 PASS DP=33;MQ=248.42;MQRankSum=4.826;ReadPosRankSum=4.826;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,14,0:0.424,0.000:33:10,9,0:9,5,0:47:83,0,50,464,679,1143:255,0,255:19,0:4.8192e+01,8.7495e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,11,3:15,4,8,6 chr1 111783982 . C . PASS END=111783984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1224:0,83,255:32,0 chr1 111783985 . C . PASS END=111783985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:31,0 chr1 111783986 . T . PASS END=111783991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:33,0 chr1 111783992 . A . PASS END=111783992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr1 111783993 . T . PASS END=111783995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1251:0,102,255:34,0 chr1 111783996 . A G, 149.33 PASS DP=34;MQ=248.46;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,20,0:0,14,0:99:187,102,0,1310,102,1310:255,102,0:0,0:1.4933e+02,9.9328e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,15:0,0,19,15 chr1 111783997 . C . PASS END=111784022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:34,0 chr1 111784023 . C . PASS END=111784028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr1 111784029 . G . PASS END=111784033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:28,0 chr1 111784034 . G . PASS END=111784044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 111784045 . G . PASS END=111784052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 111784053 . T . PASS END=111784053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,860:0,23,255:22,0 chr1 111784054 . A . PASS END=111784062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,68,255:23,0 chr1 111784063 . A . PASS END=111784063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 111784064 . A . PASS END=111784065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 111784849 . G . PASS END=111784853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,122,255:40,0 chr1 111784854 . G . PASS END=111784986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:39:0,81,1395:0,81,255:40,0 chr1 111785839 . G . PASS END=111785840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 111785841 . T . PASS END=111785842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 111785843 . A . PASS END=111785844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 111853090 . A . PASS END=111853111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,179,255:40,0 chr1 111853112 . C . PASS END=111853114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,176,255:40,0 chr1 111854311 . G . PASS END=111854340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,186,255:40,0 chr1 111854812 . G . PASS END=111854812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 111854813 . C . PASS END=111854813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 111854814 . T . PASS END=111854814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,709:0,38,255:22,0 chr1 111854815 . C . PASS END=111854817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:25,0 chr1 111854818 . C . PASS END=111854818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 111854819 . C . PASS END=111854819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 111854820 . T . PASS END=111854820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 111854821 . A . PASS END=111854821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,899:0,75,255:25,0 chr1 111854822 . C . PASS END=111854822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 111854823 . C . PASS END=111854826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 111854827 . T . PASS END=111854827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,713:0,3,255:22,0 chr1 111854828 . G . PASS END=111854829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,898:0,62,255:26,0 chr1 111854830 . C . PASS END=111854832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 111854833 . G . PASS END=111854833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr1 111854834 . C . PASS END=111854834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 111854835 . T . PASS END=111854835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:28,0 chr1 111854836 . A . PASS END=111854838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:30,0 chr1 111854839 . T . PASS END=111854839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 111854840 . C . PASS END=111854841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 111854842 . C . PASS END=111854842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 111854843 . C . PASS END=111854843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 111854844 . A . PASS END=111854844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr1 111854845 . A . PASS END=111854847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 111854848 . G . PASS END=111854848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1100:0,63,255:30,0 chr1 111854849 . G . PASS END=111854849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 111854850 . G . PASS END=111854854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:33,0 chr1 111854855 . G . PASS END=111854855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1153:0,55,255:32,0 chr1 111854856 . T . PASS END=111854888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1210:0,86,255:40,0 chr1 111854889 . A G, 49.97 PASS DP=42;MQ=222.19;MQRankSum=-2.578;ReadPosRankSum=4.296;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,19,0:0.452,0.000:42:11,8,0:12,11,0:47:85,0,47,185,185,185:255,0,255:21,0:4.9970e+01,8.7237e-05,5.0000e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,9,11,8:12,11,10,9:111854889 chr1 111854890 . A . PASS END=111854894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,129,255:40,0 chr1 111854895 . G A, 49.97 PASS DP=45;MQ=219.35;MQRankSum=-3.009;ReadPosRankSum=2.123;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,22,0:0.489,0.000:45:11,9,0:12,13,0:47:85,0,47,185,185,185:255,0,255:21,0:4.9970e+01,8.7237e-05,5.0000e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,9,14,8:12,11,11,11:111854889 chr1 111854896 . A . PASS END=111854937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,102,1582:0,102,255:40,0 chr1 111854938 . G T, 49.34 PASS DP=48;MQ=217.87;MQRankSum=-3.259;ReadPosRankSum=4.376;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,22,0:0.458,0.000:48:12,8,0:14,14,0:48:84,0,50,750,930,1680:255,0,255:25,0:4.9335e+01,7.2481e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,11,11:16,10,7,15 chr1 111854939 . G . PASS END=111854975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:37:0,90,1327:0,95,255:40,0 chr1 111854976 . G . PASS END=111854988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1169:0,80,255:29,0 chr1 111854989 . A . PASS END=111855009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,892:0,68,255:26,0 chr1 111855010 . A . PASS END=111855010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 111855011 . T . PASS END=111855013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 111857162 . G . PASS END=111857191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,144,255:40,0 chr1 111857192 . T . PASS END=111857218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,182,255:40,0 chr1 111857892 . T . PASS END=111858008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:32:0,82,1260:0,82,255:40,0 chr1 111858009 . T . PASS END=111858010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 111858011 . G . PASS END=111858011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 111858012 . T . PASS END=111858012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1008:0,16,255:26,1 chr1 111858013 . G . PASS END=111858014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,1 chr1 111858015 . G . PASS END=111858018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 111858019 . C . PASS END=111858057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,812:0,62,255:25,0 chr1 111858356 . A . PASS END=111858406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1221:0,89,255:40,0 chr1 111858407 . C . PASS END=111858443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,134,255:40,0 chr1 111858444 . C T, 47.28 PASS DP=52;MQ=249.61;MQRankSum=5.445;ReadPosRankSum=0.239;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,21,0:0.412,0.000:51:12,6,0:18,15,0:46:82,0,50,743,1070,1813:255,0,255:27,0:4.7280e+01,1.0303e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,21,6,15:19,11,13,8 chr1 111858445 . A . PASS END=111858478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:39:0,87,1305:0,89,255:40,0 chr1 111858479 . T . PASS END=111858479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:13:33:0,13,1039:0,13,255:30,0 chr1 111858480 . G . PASS END=111858482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 111858483 . C . PASS END=111858490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1048:0,76,255:26,0 chr1 111858491 . C . PASS END=111858491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,998:0,43,255:20,0 chr1 111858492 . T . PASS END=111858494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:23,0 chr1 111860303 . G . PASS END=111860320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 111860321 . G . PASS END=111860406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,978:0,80,255:38,0 chr1 111860407 . T . PASS END=111860407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1127:0,75,255:30,0 chr1 111860408 . G . PASS END=111860427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1178:0,83,255:33,0 chr1 111860608 . G . PASS END=111860731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,101,1374:0,101,255:40,0 chr1 111861115 . G . PASS END=111861115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 111861116 . A . PASS END=111861116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 111861117 . T . PASS END=111861118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 111861119 . A . PASS END=111861119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 111861120 . T . PASS END=111861290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1011:0,84,255:40,0 chr1 111861291 . T . PASS END=111861299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:23,0 chr1 111861300 . G . PASS END=111861300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 111861742 . A . PASS END=111861751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1319:0,95,255:36,0 chr1 111861752 . T . PASS END=111861784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:36:0,95,1305:0,95,255:40,0 chr1 111861785 . C . PASS END=111861821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:41:0,90,1426:0,90,255:40,0 chr1 111861822 . G A, 49.40 PASS DP=41;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=1.765;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,19,0:0.463,0.000:41:9,6,0:13,13,0:48:84,0,50,622,787,1409:255,0,255:19,0:4.9403e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,5,9,10:10,12,10,9 chr1 111861823 . T . PASS END=111861840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:34:0,81,1279:0,81,255:35,0 chr1 111861841 . A G, 46.94 PASS DP=35;MQ=250.00;MQRankSum=4.933;ReadPosRankSum=1.296;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,14,0:0.400,0.000:35:10,3,0:11,11,0:46:82,0,50,501,743,1244:255,0,255:19,0:4.6941e+01,1.0950e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,7,8,6:11,10,5,9 chr1 111861842 . T . PASS END=111861859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1129:0,80,255:30,0 chr1 111861860 . A . PASS END=111861860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 111861861 . G . PASS END=111861861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 111861949 . G . PASS END=111861973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,120,1800:0,122,255:40,0 chr1 111861974 . T C, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=4.335;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,26,0:0.542,0.000:48:8,14,0:14,12,0:48:85,0,49,930,759,1688:255,0,255:21,0:5.0000e+01,6.8339e-05,5.2398e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,12,14:12,10,16,10 chr1 111861975 . T . PASS END=111862011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,112,1800:0,112,255:40,0 chr1 111862012 . T . PASS END=111862040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,131,255:40,0 chr1 111862041 . G . PASS END=111862077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,103,1665:0,103,255:40,0 chr1 111862078 . C T, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.778;ReadPosRankSum=1.301;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,25,0:0.543,0.000:46:10,17,0:11,8,0:47:85,0,46,185,185,185:255,0,255:17,0:5.0000e+01,9.2414e-05,4.9488e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,15,10,15:9,12,14,11 chr1 111862079 . T . PASS END=111862082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,105,1575:0,132,255:37,0 chr1 111862083 . G . PASS END=111862090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,76,255:25,0 chr1 111862835 . G . PASS END=111862848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,674:0,54,255:19,0 chr1 111862849 . G . PASS END=111862851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 111862852 . C . PASS END=111862853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111862854 . G . PASS END=111862914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:25,0 chr1 111862915 . T . PASS END=111862915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:23,0 chr1 111862916 . C . PASS END=111862924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr1 111862925 . G . PASS END=111862926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111862927 . T . PASS END=111862932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 111862933 . G . PASS END=111862933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111862934 . G . PASS END=111862951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 111862952 . T G, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=0.154;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:6,9,0:7,4,0:47:85,0,47,185,185,185:255,0,255:12,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,9,8,5:7,6,4,9 chr1 111862953 . C . PASS END=111862955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 111862956 . A . PASS END=111862956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:22,0 chr1 111862957 . G . PASS END=111862989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,870:0,62,255:24,0 chr1 111862990 . A . PASS END=111862990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 111862991 . A . PASS END=111863003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 111863004 . C . PASS END=111863025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:20:0,53,810:0,53,255:19,0 chr1 111863026 . C . PASS END=111863027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 111863028 . G . PASS END=111863045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 111863046 . G . PASS END=111863046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:17,0 chr1 111863047 . C . PASS END=111863080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,44,255:17,0 chr1 111863081 . G . PASS END=111863088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 111867337 . A . PASS END=111867338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111867339 . G . PASS END=111867339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 111867340 . G . PASS END=111867342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111867343 . A . PASS END=111867343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:25,0 chr1 111867344 . T . PASS END=111867353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,995:0,84,255:30,0 chr1 111867354 . G . PASS END=111867354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 111867355 . A . PASS END=111867357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:32,0 chr1 111867358 . T . PASS END=111867358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:30,0 chr1 111867359 . C . PASS END=111867505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:89:32:0,89,1188:0,89,255:40,0 chr1 111889275 . A . PASS END=111889293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,105,255:35,0 chr1 111889532 . A . PASS END=111889644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:36:0,81,1213:0,84,255:40,0 chr1 111889645 . A . PASS END=111889671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 111890296 . G . PASS END=111890308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:99:49:0,101,1712:0,101,255:40,0 chr1 111890309 . C . PASS END=111890394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,133,255:40,0 chr1 111891138 . G . PASS END=111891154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:56:0,120,1800:0,165,255:40,0 chr1 111891155 . A . PASS END=111891191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,186,255:40,0 chr1 111891192 . C A, 50.00 PASS DP=75;MQ=250.00;MQRankSum=7.445;ReadPosRankSum=6.724;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,38,0:0.507,0.000:75:20,16,0:17,22,0:48:85,0,50,1306,1288,2594:255,0,255:36,0:5.0000e+01,6.5233e-05,5.2987e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,17,18,20:17,20,14,24 chr1 111891193 . A . PASS END=111891229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,174,255:40,0 chr1 111891230 . T . PASS END=111891268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:39:0,81,1215:0,117,255:40,0 chr1 111892728 . C . PASS END=111892729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 111892730 . C . PASS END=111892731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 111892732 . G . PASS END=111892732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:32,0 chr1 111892733 . G . PASS END=111892843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1271:0,86,255:40,0 chr1 111892844 . A . PASS END=111892844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:30,0 chr1 111892845 . G . PASS END=111892845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 111893881 . C . PASS END=111893920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,135,255:40,0 chr1 111893921 . T . PASS END=111893949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,153,255:40,0 chr1 111957086 . T . PASS END=111957096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:89:43:0,89,1523:0,89,255:40,0 chr1 111957097 . C G, 48.07 PASS DP=47;MQ=249.73;MQRankSum=5.218;ReadPosRankSum=4.314;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,20,0:0.426,0.000:47:16,10,0:11,10,0:47:83,0,50,707,940,1647:255,0,255:26,0:4.8065e+01,8.9566e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,7,12,8:11,16,12,8 chr1 111957098 . A . PASS END=111957134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:89:48:0,89,1660:0,89,255:40,0 chr1 111957135 . G . PASS END=111957207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,123,255:40,0 chr1 111957208 . C . PASS END=111957244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,116,1422:0,116,255:40,0 chr1 111957245 . G A, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=0.730;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:8,12,0:16,13,0:48:85,0,50,857,850,1708:255,0,255:20,0:5.0000e+01,6.5233e-05,5.2976e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,19,8,17:13,11,13,12 chr1 111957246 . G . PASS END=111957310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:42:0,96,1530:0,96,255:40,0 chr1 111957311 . G C, 49.97 PASS DP=45;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=2.350;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:10,6,0:13,16,0:48:85,0,50,767,774,1541:255,0,255:17,0:4.9974e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,15,8,14:11,12,12,10 chr1 111957312 . T . PASS END=111957326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1280:0,92,255:36,0 chr1 111957327 . G . PASS END=111957327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 111957328 . A . PASS END=111957348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1363:0,95,255:37,0 chr1 111957349 . A . PASS END=111957397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1094:0,80,255:34,0 chr1 111957398 . A . PASS END=111957398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 111957399 . G . PASS END=111957416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 111957417 . A . PASS END=111957417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 111957418 . C . PASS END=111957419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 111957420 . G . PASS END=111957420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 111957421 . C . PASS END=111957434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 111957435 . G . PASS END=111957437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr1 111957438 . A . PASS END=111957441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 111957442 . T . PASS END=111957447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:70:29:0,70,992:0,70,255:26,0 chr1 111957448 . G . PASS END=111957452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 111957453 . A . PASS END=111957453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 111957454 . G . PASS END=111957454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 111957455 . G . PASS END=111957456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 111957457 . T . PASS END=111957457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,873:0,34,255:24,0 chr1 111957458 . C . PASS END=111957458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 111957459 . T . PASS END=111957460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111957461 . A . PASS END=111957463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 111957464 . C . PASS END=111957464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111957465 . T . PASS END=111957465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 111957466 . G . PASS END=111957468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111957469 . A . PASS END=111957469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 111957470 . A . PASS END=111957474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 111957475 . C . PASS END=111957479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 111957480 . G . PASS END=111957500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,976:0,65,255:26,0 chr1 111957501 . CTCACAGACTGATGACTCACAGGGG C, 14.64 PASS DP=25;MQ=245.20;MQRankSum=1.465;ReadPosRankSum=-0.803;FractionInformativeReads=0.800;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,4,0:0.200,0.000:20:6,1,0:10,3,0:15:44,0,47,147,147,147:0,72,255:22,0:1.4639e+01,1.5190e-01,5.0152e+01,1.5191e+02,1.8191e+02,1.5492e+02:0.00,30.00,33.01,34.77,64.77,37.78:8,8,1,3:8,8,2,2 chr1 111957502 . T . PASS END=111957503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 111957504 . A . PASS END=111957516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 111957517 . T C, 50.15 PASS DP=21;MQ=244.27;MQRankSum=2.880;ReadPosRankSum=1.484;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,15,0:0.750,0.000:20:1,6,0:4,9,0:15:85,0,12,185,185,185:255,24,0:1,0:5.0147e+01,1.4713e-01,1.4775e+01,1.8492e+02,2.1969e+02,1.8793e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,3,7,8:2,3,8,7 chr1 111957518 . C . PASS END=111957527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,690:0,44,255:18,0 chr1 111957528 . A . PASS END=111957528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 111957529 . C . PASS END=111957529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 111957530 . A . LowGQ END=111957530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,512:23,0,255:16,0 chr1 111957531 . G . PASS END=111957531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 111957532 . A . LowGQ END=111957532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:1,0,255:14,0 chr1 111957533 . C . PASS END=111957534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 111957535 . G . LowGQ END=111957536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:23,0,255:14,0 chr1 111957537 . T . PASS END=111957538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 111957539 . A . LowGQ END=111957539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,527:23,0,255:11,0 chr1 111957540 . C . PASS END=111957541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:18:0,33,495:0,54,255:12,0 chr1 111957542 . C . PASS END=111957542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:12,0 chr1 111957543 . A . LowGQ END=111957545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,482:4,0,255:10,0 chr1 111957546 . G . PASS END=111957546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 111957547 . GGGTCAGGGTCTTTTCCCCAGGGGTCACAGACTGATAACCCACAGA G, 47.98 PASS DP=26;MQ=239.16;MQRankSum=-0.472;ReadPosRankSum=-1.984;FractionInformativeReads=0.885;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,9,0:0.391,0.000:23:7,3,0:7,6,0:47:77,0,50,375,573,947:29,0,255:11,0:4.7981e+01,9.0861e-05,5.3000e+01,3.8028e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:8,6,4,5:7,7,4,5 chr1 111957548 . G . LowGQ END=111957561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,149:0,0,255:14,0 chr1 111957562 . C . PASS END=111957562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 111957563 . C . LowGQ END=111957563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,5:16:0:16:0,0,233:146,0,255:10,0 chr1 111957564 . C . PASS END=111957564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 111957565 . C . PASS END=111957569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:18,0 chr1 111957570 . G . LowGQ END=111957570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,7:20:0:20:0,0,225:211,0,255:12,0 chr1 111957571 . T . PASS END=111957573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111957574 . C . PASS END=111957575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 111957576 . G . PASS END=111957576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111957577 . A . PASS END=111957577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:19,0 chr1 111957578 . C . PASS END=111957582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 111957583 . A . LowGQ END=111957583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,7:19:0:19:0,0,186:214,0,255:12,0 chr1 111957584 . A . PASS END=111957585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 111957586 . C . PASS END=111957587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 111957588 . A . PASS END=111957591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 111957592 . A . LowGQ END=111957592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,8:22:0:22:0,0,210:244,0,255:12,0 chr1 111957593 . G . PASS END=111957594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 111957595 . T . PASS END=111957595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 111957596 . C . PASS END=111957631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,894:0,72,255:26,0 chr1 111957632 . C . PASS END=111957642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 111957643 . G . PASS END=111957648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 111957649 . T . PASS END=111957651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr1 111957652 . C . PASS END=111957655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 111957656 . A . PASS END=111957692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1072:0,90,255:32,0 chr1 111957693 . A G, 50.00 PASS DP=34;MQ=245.05;MQRankSum=2.844;ReadPosRankSum=2.254;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,19,0:0.559,0.000:34:9,7,0:6,12,0:48:85,0,49,680,537,1216:255,0,255:15,0:5.0000e+01,7.0928e-05,5.1978e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,10,9:10,5,12,7 chr1 111957694 . T . PASS END=111957711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1217:0,86,255:31,0 chr1 111957712 . T . PASS END=111957712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 111957713 . C . PASS END=111957714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 111957715 . T . PASS END=111957715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:27,0 chr1 111957716 . C . PASS END=111957721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1178:0,93,255:31,0 chr1 111957722 . T . PASS END=111957723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:26,0 chr1 111957724 . G . PASS END=111957730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:31,0 chr1 111957731 . A . PASS END=111957736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 111957737 . C . PASS END=111957750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,865:0,67,255:26,0 chr1 111957751 . C . PASS END=111957751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111957752 . A . PASS END=111957752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 111957753 . G . PASS END=111957759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 111957760 . T . PASS END=111957760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 111957761 . T . PASS END=111957762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 111957763 . T . PASS END=111957766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 111957767 . G . PASS END=111957853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1023:0,83,255:32,0 chr1 111957854 . A . PASS END=111957854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,787:0,50,255:26,0 chr1 111957855 . A . PASS END=111957861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1025:0,87,255:29,0 chr1 111957862 . T . PASS END=111957862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,968:0,57,255:27,0 chr1 111957863 . A . PASS END=111957928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1139:0,80,255:34,0 chr1 111957929 . T . PASS END=111957929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 111957930 . G . PASS END=111957951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,964:0,84,255:28,0 chr1 111957952 . A . PASS END=111957952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr1 111957953 . A . PASS END=111957966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 111958945 . C . PASS END=111958953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:26,0 chr1 111958954 . C . PASS END=111959080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,992:0,81,255:40,0 chr1 111962232 . C . PASS END=111962347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:35:0,92,1272:0,92,255:40,0 chr1 111962348 . T . PASS END=111962348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:31,0 chr1 111963898 . C . PASS END=111963900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 111963901 . A . PASS END=111963901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 111963902 . A . PASS END=111964059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:30:0,80,969:0,80,255:40,0 chr1 111964060 . T . PASS END=111964060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1144:0,77,255:34,0 chr1 111964061 . C . PASS END=111964063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1294:0,92,255:34,0 chr1 111964064 . C . PASS END=111964064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:33,0 chr1 111964065 . A . PASS END=111964072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1173:0,88,255:34,0 chr1 111964073 . A . PASS END=111964073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:29,0 chr1 111964074 . T . PASS END=111964074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 111964075 . A . PASS END=111964075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr1 111964076 . G . PASS END=111964083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1255:0,89,255:35,0 chr1 111964187 . C . PASS END=111964295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:46:0,108,1620:0,138,255:40,0 chr1 111965549 . C . PASS END=111965550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 111965551 . T . PASS END=111965551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 111965552 . C . PASS END=111965667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1013:0,82,255:40,0 chr1 111965668 . G . PASS END=111965668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:26,0 chr1 111965669 . A . PASS END=111965670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 111965671 . C . PASS END=111965673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 111966165 . T . PASS END=111966165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:28,0 chr1 111966166 . T . PASS END=111966168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 111966169 . A . PASS END=111966169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,993:0,63,255:28,0 chr1 111966170 . T . PASS END=111966188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1135:0,93,255:31,0 chr1 111966189 . C . PASS END=111966189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 111966190 . C . PASS END=111966253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:31:0,93,1141:0,93,255:40,0 chr1 111966254 . C . PASS END=111966290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,150,255:40,0 chr1 111966291 . C T, 48.65 PASS DP=50;MQ=250.00;MQRankSum=6.010;ReadPosRankSum=5.482;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,22,0:0.440,0.000:50:15,12,0:13,10,0:47:83,0,50,758,993,1751:255,0,255:24,0:4.8650e+01,8.1024e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,10,12:15,13,12,10 chr1 111966292 . T . PASS END=111966328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,99,1485:0,111,255:40,0 chr1 111966329 . A . PASS END=111966330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1355:0,95,255:32,0 chr1 111968005 . C . PASS END=111968052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1250:0,89,255:36,0 chr1 111968053 . T . PASS END=111968054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,962:0,60,255:28,0 chr1 111968055 . T . PASS END=111968058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 111968059 . T . PASS END=111968061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 111969059 . C . PASS END=111969199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:33:0,81,1114:0,82,255:40,0 chr1 111969200 . G . PASS END=111969211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:29:0,72,1080:0,83,255:26,0 chr1 111969212 . G . PASS END=111969217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 111969218 . C . PASS END=111969256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 111969257 . G . PASS END=111969262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 111969263 . C . PASS END=111969263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 111969684 . C . PASS END=111969713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 111970319 . C . PASS END=111970343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,206,255:40,0 chr1 111983852 . C . PASS END=111983852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 111983853 . T . PASS END=111983853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 111983854 . A . PASS END=111983859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 111983860 . T . PASS END=111983860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 111983861 . A . PASS END=111983863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:13,0 chr1 111983864 . A . PASS END=111983864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 111983865 . C . PASS END=111983866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 111983867 . T . PASS END=111983870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 111983871 . G . PASS END=111983871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 111983872 . G . PASS END=111983879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:17,0 chr1 111983880 . G . PASS END=111983881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 111983882 . T . PASS END=111983892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,584:0,40,255:19,0 chr1 111983893 . C . PASS END=111983896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 111983897 . G . PASS END=111983908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111983909 . G . PASS END=111983915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 111983916 . A . PASS END=111983917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 111983918 . C . PASS END=111983918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 111983919 . T . PASS END=111983919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 111983920 . G . PASS END=111983922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 111983923 . G . PASS END=111983940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,714:0,46,255:19,0 chr1 111983941 . T . PASS END=111983943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,1 chr1 111983944 . G . PASS END=111983958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 111983959 . G . PASS END=111984011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 111984647 . A . PASS END=111984751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:41:0,116,1588:0,116,255:40,0 chr1 111985275 . C . PASS END=111985381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1260:0,83,255:40,0 chr1 111985382 . A . PASS END=111985383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr1 111985945 . C . PASS END=111985961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 111985962 . C . PASS END=111985962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 111985963 . T . PASS END=111985977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 111985978 . A . PASS END=111985985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1000:0,78,255:26,0 chr1 111985986 . G . PASS END=111985988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,65,255:19,0 chr1 111985989 . G . PASS END=111986003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:21,0 chr1 111986004 . G . PASS END=111986016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 111986489 . C . PASS END=111986543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:37:0,95,1379:0,95,255:40,0 chr1 111986676 . C . PASS END=111986746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:54:0,120,1800:0,161,255:40,0 chr1 111989717 . C . PASS END=111989766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,158,255:40,0 chr1 111990057 . C . PASS END=111990198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,105,1505:0,113,255:40,0 chr1 111991241 . C . PASS END=111991259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:17,0 chr1 111991260 . A . PASS END=111991260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:15,0 chr1 111991261 . A . PASS END=111991275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,652:0,51,255:19,0 chr1 111991276 . A . PASS END=111991287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,760:0,63,255:23,0 chr1 111991288 . T . PASS END=111991288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 111991289 . C . PASS END=111991308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 111991309 . T . PASS END=111991309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 111991310 . G . PASS END=111991344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 111991345 . G . PASS END=111991345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 111991346 . C . PASS END=111991360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:22,0 chr1 111991361 . A . PASS END=111991361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 111991362 . A . PASS END=111991407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 111991408 . C . PASS END=111991426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,698:0,54,255:18,0 chr1 111991677 . C . PASS END=111991678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:18,0 chr1 111991679 . G . PASS END=111991679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 111991680 . A . PASS END=111991683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr1 111991684 . G . PASS END=111991684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 111991685 . T . PASS END=111991685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 111991686 . A . PASS END=111991696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:21,0 chr1 111991697 . T . LowGQ END=111991697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,626:1,0,255:18,0 chr1 111991698 . C . PASS END=111991701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,685:0,63,255:21,0 chr1 111991702 . C . PASS END=111991702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr1 111991703 . T . PASS END=111991703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 111991704 . G . PASS END=111991704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 111991705 . C . PASS END=111991705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 111991706 . C . PASS END=111991709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 111991710 . C . PASS END=111991715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 111991716 . A . PASS END=111991716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,678:0,32,255:18,0 chr1 111991717 . G . PASS END=111991739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,560:0,40,255:19,0 chr1 111991740 . T . PASS END=111991740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:15,0 chr1 111991741 . C . PASS END=111991755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,643:0,40,255:17,0 chr1 111991756 . C . PASS END=111991769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:15:0,33,495:0,34,255:13,0 chr1 111991770 . G . PASS END=111991770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 111991771 . G . PASS END=111991779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 111991780 . T . PASS END=111991790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:9,0 chr1 111991791 . T . PASS END=111991791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:7,0 chr1 111992164 . A . PASS END=111992165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 111992166 . G . PASS END=111992166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 111992167 . C . PASS END=111992203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1127:0,93,255:33,0 chr1 111992459 . C . PASS END=111992495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,152,255:40,0 chr1 111996833 . G . PASS END=111996835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 111996836 . A . PASS END=111996837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 111996838 . T . PASS END=111996852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,992:0,65,255:26,0 chr1 111996853 . C . PASS END=111996967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:29:0,87,1102:0,87,255:40,0 chr1 111996968 . T . PASS END=111996978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:25,0 chr1 111998708 . G . PASS END=111998710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1271:0,96,255:33,0 chr1 111998711 . C . PASS END=111998711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:34,0 chr1 111998712 . C . PASS END=111998716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1278:0,89,255:36,0 chr1 111998717 . T . PASS END=111998871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,99,1329:0,107,255:40,0 chr1 111999252 . C . PASS END=111999377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:38:0,84,1260:0,93,255:40,0 chr1 112002079 . A . PASS END=112002081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,714:0,46,255:19,0 chr1 112002082 . A . PASS END=112002083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 112002084 . C . PASS END=112002087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 112002088 . G . PASS END=112002089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 112002090 . T . PASS END=112002090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 112002091 . A . PASS END=112002104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,695:0,63,255:24,0 chr1 112002105 . T . PASS END=112002105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 112002106 . A . PASS END=112002113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,789:0,72,255:26,0 chr1 112002114 . G . PASS END=112002114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 112002115 . G . PASS END=112002115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,846:0,64,255:26,0 chr1 112002116 . A . PASS END=112002124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,978:0,81,255:36,0 chr1 112002125 . A . PASS END=112002125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:35,0 chr1 112002126 . T . PASS END=112002241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1235:0,84,255:40,0 chr1 112002242 . G . PASS END=112002253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:25,0 chr1 112002254 . A . PASS END=112002258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:22:0,54,810:0,66,255:19,0 chr1 112003539 . G . PASS END=112003612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1216:0,83,255:40,0 chr1 112003613 . G . PASS END=112003616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 112018643 . A . PASS END=112018656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,153,255:40,0 chr1 112018657 . G A, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.258;ReadPosRankSum=3.873;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,30,0:0.556,0.000:54:12,12,0:12,18,0:48:85,0,49,1057,858,1915:255,0,255:23,0:5.0000e+01,7.1187e-05,5.1925e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,12,18:12,12,22,8 chr1 112018658 . G . PASS END=112018687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,117,1681:0,119,255:40,0 chr1 112019420 . A . PASS END=112019489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:59:0,120,1800:0,170,255:40,0 chr1 112019956 . C . PASS END=112020050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,158,255:40,0 chr1 112020273 . A . PASS END=112020273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:26,0 chr1 112020274 . T . PASS END=112020275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 112020276 . G . PASS END=112020276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 112020277 . A . PASS END=112020277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:26,0 chr1 112020278 . A . PASS END=112020278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 112020279 . G . PASS END=112020279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr1 112020280 . G . PASS END=112020283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 112020284 . A . PASS END=112020284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,848:0,18,255:27,0 chr1 112020285 . G . PASS END=112020286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 112020287 . C . PASS END=112020287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 112020288 . T . PASS END=112020397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1143:0,83,255:40,0 chr1 112020605 . C . PASS END=112020745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:43:0,96,1466:0,96,255:40,0 chr1 112026309 . T . PASS END=112026379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,143,255:40,0 chr1 112028354 . C . PASS END=112028354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1191:0,81,255:31,0 chr1 112028355 . T . LowGQ END=112028355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,9:38:0:38:0,0,877:57,0,255:28,0 chr1 112028356 . A . PASS END=112028356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1384:0,93,255:36,0 chr1 112028357 . C . PASS END=112028357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1365:0,76,255:37,0 chr1 112028358 . T . PASS END=112028358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:4:42:0,4,1200:0,4,255:33,0 chr1 112028359 . T . PASS END=112028359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:37:42:0,37,1219:0,37,255:35,0 chr1 112028360 . A . PASS END=112028360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1515:0,112,255:38,0 chr1 112028361 . C . PASS END=112028361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:8:45:0,8,1349:0,8,255:39,0 chr1 112028362 . C . PASS END=112028364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1574:0,102,255:40,0 chr1 112028365 . T . PASS END=112028365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,7:52:26:52:0,26,1538:0,26,255:40,0 chr1 112028366 . T . PASS END=112028366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,6:52:12:52:0,12,1535:0,12,255:40,0 chr1 112028367 . C . PASS END=112028367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:87:53:0,87,1800:0,87,255:40,0 chr1 112028368 . T . PASS END=112028368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:21:53:0,21,1496:0,21,255:40,0 chr1 112028369 . A . PASS END=112028369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:53:0,104,1817:0,104,255:40,0 chr1 112028370 . T . PASS END=112028370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:32:53:0,32,1657:0,32,255:40,0 chr1 112028371 . T . PASS END=112028371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,126,255:40,0 chr1 112028372 . C . PASS END=112028372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:44:57:0,44,1836:0,44,255:40,0 chr1 112028373 . C . PASS END=112028373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:77:57:0,77,1861:0,77,255:40,0 chr1 112028374 . T . PASS END=112028374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:55:58:0,55,1752:0,55,255:40,0 chr1 112028375 . T . PASS END=112028376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,124,255:40,0 chr1 112028377 . G . PASS END=112028377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:33:58:0,33,1831:0,33,255:40,0 chr1 112028378 . A . PASS END=112028380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:83:58:0,83,1800:0,83,255:40,0 chr1 112028381 . T . PASS END=112028382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:55:59:0,55,1739:0,55,255:40,0 chr1 112028383 . T . PASS END=112028383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:99:59:0,111,2042:0,111,255:40,0 chr1 112028384 . C . PASS END=112028384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:75:59:0,75,1947:0,75,255:40,0 chr1 112028385 . C . PASS END=112028385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:97:59:0,97,1974:0,97,255:40,0 chr1 112028386 . T . PASS END=112028386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:25:59:0,25,1834:0,25,255:40,0 chr1 112028387 . C . PASS END=112028388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,105,1800:0,105,255:40,0 chr1 112028389 . T . PASS END=112028389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:52:59:0,52,1888:0,52,255:40,0 chr1 112028390 . T . PASS END=112028390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:60:59:0,60,1909:0,60,255:40,0 chr1 112028391 . T . PASS END=112028392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:91:59:0,91,1800:0,91,255:40,0 chr1 112028393 . G . PASS END=112028393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:70:60:0,70,2030:0,70,255:40,0 chr1 112028394 . G . PASS END=112028399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:89:59:0,89,1800:0,89,255:40,0 chr1 112028400 . T . PASS END=112028400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:72:60:0,72,2049:0,72,255:40,0 chr1 112028401 . G . PASS END=112028422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:86:59:0,86,1800:0,86,255:40,0 chr1 112028423 . C . PASS END=112028459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,117,1755:0,136,255:40,0 chr1 112028460 . G A, 48.06 PASS DP=53;MQ=250.00;MQRankSum=6.103;ReadPosRankSum=1.880;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,22,0:0.423,0.000:52:19,7,0:11,15,0:47:83,0,50,776,1036,1812:255,0,255:23,0:4.8064e+01,8.9566e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,8,14:11,19,19,3 chr1 112028461 . T . PASS END=112028462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,117,1755:0,150,255:39,0 chr1 112029208 . C . PASS END=112029230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,155,255:40,0 chr1 112029231 . A . PASS END=112029274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:58:0,120,1800:0,156,255:40,0 chr1 112031299 . C . PASS END=112031432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:34:0,87,1208:0,98,255:40,0 chr1 112031433 . C . PASS END=112031451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:24:0,66,990:0,72,255:25,0 chr1 112031452 . G . PASS END=112031457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,853:0,56,255:19,0 chr1 112031458 . T . PASS END=112031461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 112031462 . T . PASS END=112031462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:20,0 chr1 112031463 . G . PASS END=112031487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,861:0,69,255:26,0 chr1 112031488 . T . PASS END=112031489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 112031490 . C . PASS END=112031504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr1 112031505 . G . PASS END=112031508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 112031509 . T . PASS END=112031512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:29:0,75,1094:0,77,255:26,0 chr1 112031513 . G . PASS END=112031516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 112031517 . C . PASS END=112031517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 112031518 . A . PASS END=112031519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 112031520 . T . PASS END=112031542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 112031543 . C . PASS END=112031598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:27:0,81,1016:0,81,255:34,0 chr1 112031599 . T . PASS END=112031599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 112031600 . G . PASS END=112031601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 112031602 . C . PASS END=112031610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,74,255:25,0 chr1 112031611 . A . PASS END=112031611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:21,0 chr1 112031612 . G . PASS END=112031624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,862:0,72,255:24,0 chr1 112031625 . T . PASS END=112031625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 112031626 . T . PASS END=112031631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 112031632 . C . PASS END=112031632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 112031633 . C . PASS END=112031635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 112031636 . G . PASS END=112031646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,53,255:19,0 chr1 112033278 . C . PASS END=112033384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,171,255:40,0 chr1 112042572 . C . PASS END=112042594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:33:0,98,1235:0,98,255:39,0 chr1 112042595 . T . PASS END=112042631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,107,1459:0,107,255:40,0 chr1 112042632 . A G, 206.51 PASS DP=54;MQ=250.00;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,28,0:0,25,0:157:244,160,0,2048,160,2048:255,162,0:0,0:2.0651e+02,1.5651e+02,0.0000e+00,4.5000e+02,1.9128e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,23:0,0,27,26 chr1 112042633 . G . PASS END=112042669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,135,255:40,0 chr1 112042670 . T . PASS END=112043126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:43:0,92,1463:0,92,255:40,0 chr1 112043127 . G . PASS END=112043127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1684:0,75,255:40,0 chr1 112043128 . C . PASS END=112043178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,117,1755:0,121,255:40,0 chr1 112043221 . C . PASS END=112043242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:54:0,120,1800:0,129,255:40,0 chr1 112045627 . C . PASS END=112045631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:13,0 chr1 112045632 . G . PASS END=112045632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 112045633 . G . PASS END=112045635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 112045636 . A . PASS END=112045642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 112045643 . C . PASS END=112045643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 112045644 . C . PASS END=112045655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:18,0 chr1 112045656 . G . PASS END=112045658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112045659 . C . PASS END=112045659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 112045660 . A . PASS END=112045674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:23,0 chr1 112045675 . A . PASS END=112045675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 112045676 . A . PASS END=112045690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:25,0 chr1 112045691 . C . PASS END=112045691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 112045692 . G . PASS END=112045723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,810:0,61,255:26,0 chr1 112045724 . A . PASS END=112045725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 112045726 . A . PASS END=112045734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:24,0 chr1 112045735 . T . PASS END=112045735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 112045736 . A . PASS END=112045737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 112045738 . A . PASS END=112045738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 112045739 . A . PASS END=112045751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,917:0,65,255:26,0 chr1 112045752 . G . PASS END=112045755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 112045756 . A . PASS END=112045757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 112045758 . G . PASS END=112045759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 112045760 . T . PASS END=112045766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 112045767 . A . PASS END=112045767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:23,0 chr1 112045768 . A . PASS END=112045772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1008:0,68,255:25,0 chr1 112045773 . C . PASS END=112045773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr1 112045774 . A . PASS END=112045776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,793:0,61,255:25,0 chr1 112045777 . G . PASS END=112045779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 112045780 . A . PASS END=112045780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 112045781 . T . PASS END=112045781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:25,0 chr1 112045782 . G . PASS END=112045788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1141:0,80,255:28,0 chr1 112045789 . A . PASS END=112045789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 112045790 . C . PASS END=112045794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 112045795 . A . PASS END=112045795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 112045796 . C . PASS END=112045796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 112045797 . A . PASS END=112045797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1103:0,47,255:28,0 chr1 112045798 . G . PASS END=112045801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1156:0,83,255:29,0 chr1 112045802 . T . PASS END=112045802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:29,0 chr1 112045803 . G . PASS END=112045841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:33:0,88,1166:0,88,255:37,0 chr1 112045842 . G . PASS END=112045842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:34,0 chr1 112045843 . G . PASS END=112045923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1241:0,86,255:40,0 chr1 112045924 . A . PASS END=112045924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1311:0,59,255:35,0 chr1 112045925 . T . PASS END=112045944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1395:0,90,255:39,0 chr1 112045945 . G . PASS END=112045945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:30,0 chr1 112045946 . C . PASS END=112045951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:31,0 chr1 112045952 . A . PASS END=112045952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 112045953 . C . PASS END=112045957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,86,255:28,0 chr1 112045958 . C . PASS END=112045969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:24,0 chr1 112045970 . T . PASS END=112045970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:19,0 chr1 112045971 . G . PASS END=112045975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 112045976 . T . PASS END=112045976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,755:0,58,255:21,0 chr1 112106468 . T . PASS END=112106478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:34,0 chr1 112106479 . A . PASS END=112106479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:32,0 chr1 112106480 . C . PASS END=112106481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 112106482 . C . PASS END=112106498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,105,1288:0,105,255:40,0 chr1 112106499 . A . PASS END=112106499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:39,0 chr1 112106500 . G . PASS END=112106557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:38:0,81,1215:0,114,255:40,0 chr1 112106558 . G . PASS END=112106574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:27:0,65,990:0,65,255:26,0 chr1 112162209 . C . PASS END=112162236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 112162237 . T . PASS END=112162237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 112162238 . C . PASS END=112162242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 112162243 . T . PASS END=112162243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr1 112162244 . A . PASS END=112162347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,582:0,41,255:19,0 chr1 112162348 . G . PASS END=112162357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:18:0,30,450:0,54,255:13,0 chr1 112162358 . A . PASS END=112162358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:10,0 chr1 112162359 . C . PASS END=112162360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:16:0,36,540:0,48,255:12,0 chr1 112162361 . A . PASS END=112162361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 112162362 . G . PASS END=112162383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 112162384 . G . PASS END=112162392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 112162393 . C . PASS END=112162416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 112162417 . G . PASS END=112162417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 112162418 . C . PASS END=112162420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 112162421 . C . PASS END=112162421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 112162422 . C . PASS END=112162422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 112162423 . G . PASS END=112162432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 112162433 . C . PASS END=112162441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 112162442 . C . PASS END=112162443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 112162444 . C . PASS END=112162444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 112162445 . C . PASS END=112162447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 112162448 . C . PASS END=112162448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 112162449 . T . PASS END=112162450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 112162451 . C . PASS END=112162451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 112162452 . T . PASS END=112162452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 112162453 . G . PASS END=112162453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 112162454 . T . PASS END=112162460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 112162461 . G . PASS END=112162469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr1 112162470 . G . PASS END=112162470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 112162471 . A . PASS END=112162471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:13,0 chr1 112162472 . G . PASS END=112162472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 112162473 . C . PASS END=112162473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 112162474 . A . PASS END=112162474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr1 112162475 . G . PASS END=112162476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr1 112162477 . A . PASS END=112162477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 112162478 . G . PASS END=112162478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 112162479 . C . PASS END=112162479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:16,0 chr1 112162480 . C . PASS END=112162483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,516:0,51,255:17,0 chr1 112162484 . G . PASS END=112162484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 112162485 . C . PASS END=112162485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 112162486 . C . PASS END=112162486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 112162487 . G . PASS END=112162487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,586:0,54,255:18,0 chr1 112162488 . A . PASS END=112162488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 112162489 . G . PASS END=112162489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 112162490 . A . PASS END=112162490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,471:0,23,255:15,0 chr1 112162491 . G . PASS END=112162493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 112162494 . G . PASS END=112162495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 112162496 . G . PASS END=112162496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 112162497 . A . LowGQ END=112162497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,518:15,0,255:11,0 chr1 112162498 . G . PASS END=112162499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,613:0,40,255:15,0 chr1 112162500 . A . PASS END=112162500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:14,0 chr1 112162501 . G . PASS END=112162505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:16,0 chr1 112162506 . A . PASS END=112162506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:13,0 chr1 112162507 . G . PASS END=112162508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,592:0,40,255:13,0 chr1 112162509 . A . PASS END=112162510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,537:0,34,255:14,0 chr1 112162511 . G . PASS END=112162514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 112162515 . T . PASS END=112162515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,509:0,37,255:14,0 chr1 112162516 . G . PASS END=112162516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 112162517 . G . PASS END=112162518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 112162519 . G . PASS END=112162519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 112162520 . G . PASS END=112162520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 112162521 . A . PASS END=112162533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:18:0,40,590:0,40,255:18,0 chr1 112162534 . G . PASS END=112162534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 112162535 . G . PASS END=112162540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,599:0,40,255:19,0 chr1 112162541 . G . PASS END=112162541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 112162542 . C . PASS END=112162542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,592:0,40,255:18,0 chr1 112162543 . G . PASS END=112162543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,621:0,26,255:18,0 chr1 112162544 . C . PASS END=112162545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:19,0 chr1 112162546 . G . PASS END=112162546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 112162547 . G . PASS END=112162548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,590:0,40,255:18,0 chr1 112162549 . C . PASS END=112162549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 112162550 . C . PASS END=112162550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,556:0,43,255:19,0 chr1 112162551 . G . PASS END=112162553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 112162554 . G . PASS END=112162554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 112162555 . G . PASS END=112162557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 112162558 . T . PASS END=112162558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,621:0,30,255:17,0 chr1 112162559 . G . PASS END=112162569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:20:0,46,642:0,46,255:19,0 chr1 112162570 . G . PASS END=112162572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 112162573 . G . PASS END=112162577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 112162578 . C . PASS END=112162582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 112162583 . C . PASS END=112162584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 112162585 . G . PASS END=112162590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 112162591 . G . PASS END=112162591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 112162592 . A . PASS END=112162593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 112162594 . G . PASS END=112162594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 112162595 . G . PASS END=112162598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112162599 . G . PASS END=112162599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:19,0 chr1 112162600 . G . PASS END=112162604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112162605 . C . PASS END=112162620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,674:0,44,255:19,0 chr1 112162621 . C . PASS END=112162621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 112162622 . G . PASS END=112162622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 112162623 . A . PASS END=112162623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:14,0 chr1 112162624 . G . PASS END=112162629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:23:0,41,837:0,41,255:19,0 chr1 112162630 . G . PASS END=112162631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 112162632 . C . PASS END=112162632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,764:0,33,255:19,0 chr1 112162633 . G . PASS END=112162633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 112162634 . G . PASS END=112162651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 112162652 . T . PASS END=112162652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:20,0 chr1 112162653 . C . PASS END=112162653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 112162654 . G . PASS END=112162656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 112162657 . T . PASS END=112162657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 112162658 . G . PASS END=112162659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 112162660 . C . PASS END=112162660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 112162661 . T . PASS END=112162693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:22:0,62,914:0,62,255:26,0 chr1 112162694 . G . PASS END=112162696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 112162697 . C . PASS END=112162697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 112162698 . G . PASS END=112162699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 112162700 . C . PASS END=112162704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:25,0 chr1 112162705 . C . PASS END=112162705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:24,0 chr1 112162706 . G . PASS END=112162711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:25,0 chr1 112162712 . C . PASS END=112162712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:23,0 chr1 112162713 . T . PASS END=112162723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:26:0,65,953:0,65,255:26,0 chr1 112162724 . A . PASS END=112162724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr1 112162725 . G . PASS END=112162735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,979:0,71,255:26,0 chr1 112162736 . T . PASS END=112162736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 112162737 . C . PASS END=112162737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 112162738 . T . PASS END=112162741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 112162742 . A . PASS END=112162744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1053:0,71,255:29,0 chr1 112162745 . C . PASS END=112162746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 112162747 . C . PASS END=112162747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 112162748 . G . PASS END=112162748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 112162749 . G . PASS END=112162749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 112162750 . C . PASS END=112162754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 112162755 . G . PASS END=112162755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 112162756 . C . PASS END=112162838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1073:0,80,255:38,0 chr1 112162946 . C . PASS END=112162950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 112162951 . T . PASS END=112162951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 112162952 . G . PASS END=112162954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 112162955 . T . PASS END=112162955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 112162956 . G . PASS END=112162962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,764:0,69,255:24,0 chr1 112162963 . G . PASS END=112162963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 112162964 . T . PASS END=112163000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 112163001 . G . PASS END=112163001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 112163002 . T . PASS END=112163002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,754:0,38,255:18,0 chr1 112163003 . C . PASS END=112163016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,643:0,40,255:19,0 chr1 112163017 . C . PASS END=112163017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 112163018 . A . PASS END=112163031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 112163032 . A . PASS END=112163032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:15,0 chr1 112163033 . C . PASS END=112163036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 112163037 . G . PASS END=112163037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 112163038 . C . PASS END=112163038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:16,0 chr1 112163039 . T . PASS END=112163039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:15,0 chr1 112163040 . C . PASS END=112163040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 112163041 . T . PASS END=112163041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,468:0,31,255:14,0 chr1 112163042 . C . PASS END=112163087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,531:0,48,255:19,0 chr1 112163088 . G . PASS END=112163119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,848:0,61,255:26,0 chr1 112163120 . T . PASS END=112163139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,660:0,54,255:18,0 chr1 112163140 . A . PASS END=112163140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 112163141 . C . PASS END=112163149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 112233983 . A . PASS END=112234039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,110,1515:0,110,255:40,0 chr1 112237963 . A . PASS END=112238031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:52:0,120,1800:0,123,255:40,0 chr1 112240063 . C . PASS END=112240084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,104,1750:0,104,255:40,0 chr1 112240085 . A . PASS END=112240119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:43:0,96,1440:0,111,255:40,0 chr1 112245958 . G . PASS END=112246098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,111,1665:0,126,255:40,0 chr1 112246965 . G . PASS END=112246980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1180:0,86,255:34,0 chr1 112246981 . T . PASS END=112246981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1087:0,72,255:32,0 chr1 112246982 . T . PASS END=112247228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:34:0,86,1170:0,86,255:40,0 chr1 112251771 . A . PASS END=112251857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,117,1568:0,118,255:40,0 chr1 112265724 . T . PASS END=112265733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1219:0,99,255:34,0 chr1 112265734 . C . PASS END=112265734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 112265735 . G . PASS END=112265742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1274:0,105,255:35,0 chr1 112265743 . A . PASS END=112265743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:33,0 chr1 112265744 . A . PASS END=112265770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1394:0,98,255:37,0 chr1 112269590 . T . PASS END=112269607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 112269608 . G . PASS END=112269616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 112269617 . A . PASS END=112269617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 112269618 . A . PASS END=112269633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:43:15:0,43,430:0,43,255:19,0 chr1 112269634 . G . PASS END=112269690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,678:0,60,255:26,0 chr1 112269691 . T . PASS END=112269691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 112269692 . G . PASS END=112269748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,809:0,69,255:25,0 chr1 112269749 . T . PASS END=112269749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 112269750 . G . PASS END=112269815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:25,0 chr1 112269816 . T . PASS END=112269818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 112269819 . C . PASS END=112269821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 112269822 . T . PASS END=112269833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,50,255:19,0 chr1 112269834 . C . PASS END=112269834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:15,0 chr1 112269835 . T . PASS END=112269835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 112269836 . A . PASS END=112269846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:16,0 chr1 112269847 . T . PASS END=112269848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:14,0 chr1 112269849 . T . PASS END=112269871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr1 112269872 . G A, 47.52 PASS DP=16;MQ=250.00;MQRankSum=3.200;ReadPosRankSum=2.115;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,6,0:0.375,0.000:16:5,2,0:5,4,0:46:82,0,50,186,358,543:162,0,255:10,0:4.7523e+01,9.8627e-05,5.3000e+01,1.8584e+02,3.9237e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,2,4:5,5,2,4 chr1 112269873 . A . PASS END=112269903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr1 112269904 . T . PASS END=112269904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:16,0 chr1 112269905 . C . PASS END=112269909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 112269910 . C . PASS END=112269919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,665:0,41,255:17,0 chr1 112269920 . A . PASS END=112269920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 112269921 . C . PASS END=112269924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 112269925 . C . PASS END=112269926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 112269927 . C . PASS END=112269927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 112269928 . C . PASS END=112269931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 112269932 . A . PASS END=112269941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 112269942 . T . PASS END=112269942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 112269943 . T . PASS END=112269950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 112269951 . C . PASS END=112269951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:16,0 chr1 112269952 . C . PASS END=112269954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 112269955 . T . PASS END=112269955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 112269956 . C . PASS END=112269961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 112269962 . T . PASS END=112269963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,582:0,34,255:15,0 chr1 112269964 . C . PASS END=112269966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 112269967 . G . PASS END=112269967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 112269968 . C . PASS END=112269969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 112269970 . A . PASS END=112269970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 112269971 . G . PASS END=112269971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 112269972 . T . PASS END=112269972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:15,0 chr1 112269973 . C . PASS END=112269990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 112269991 . G . PASS END=112269991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 112269992 . G . PASS END=112270004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 112270005 . T . PASS END=112270005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 112270006 . T . PASS END=112270019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 112270020 . A . PASS END=112270020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 112270021 . G . PASS END=112270028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 112270029 . C . PASS END=112270029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 112270030 . G . PASS END=112270046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,660:0,41,255:18,0 chr1 112270047 . A . PASS END=112270047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 112270048 . T . PASS END=112270052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 112270053 . G . PASS END=112270055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 112270056 . G . PASS END=112270056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 112270057 . A . PASS END=112270057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,678:0,32,255:18,0 chr1 112270058 . G . PASS END=112270099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,682:0,44,255:19,0 chr1 112270100 . A . PASS END=112270100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 112270101 . C . PASS END=112270102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 112270103 . G . PASS END=112270114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:26,0 chr1 112270115 . C . PASS END=112270165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,962:0,81,255:35,0 chr1 112270166 . T . PASS END=112270166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:35,0 chr1 112270167 . G . PASS END=112270224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:35,0 chr1 112270225 . T . PASS END=112270261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:32,0 chr1 112270262 . G A, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.826;ReadPosRankSum=0.856;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,19,0:0.576,0.000:33:8,10,0:6,9,0:48:85,0,48,671,501,1172:255,0,255:12,0:5.0000e+01,7.5329e-05,5.1348e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,4,7,12:10,4,8,11 chr1 112270263 . C . PASS END=112270299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:32,0 chr1 112270300 . G . PASS END=112270303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 112270304 . C . PASS END=112270304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 112270305 . C . PASS END=112270340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1169:0,80,255:32,0 chr1 112270341 . A . PASS END=112270341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr1 112270342 . C . PASS END=112270382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1082:0,80,255:32,0 chr1 112270383 . T . PASS END=112270386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 112270387 . T . PASS END=112270398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 112270399 . A . PASS END=112270441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 112281808 . C . PASS END=112281814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 112281815 . T . PASS END=112281815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:24,0 chr1 112281816 . G . PASS END=112281816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 112281817 . T . PASS END=112281817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 112281818 . T . PASS END=112281818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:28,0 chr1 112281819 . T . PASS END=112281849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1117:0,82,255:33,0 chr1 112281850 . G . PASS END=112281850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:29,0 chr1 112281851 . C . PASS END=112281864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr1 112298323 . C . PASS END=112298323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 112298324 . A . PASS END=112298324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 112298325 . G . PASS END=112298325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 112298326 . T . PASS END=112298326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 112298327 . T . PASS END=112298327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:29,0 chr1 112298328 . G . PASS END=112298328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 112298329 . C . PASS END=112298329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,805:0,26,255:25,0 chr1 112298330 . C . PASS END=112298330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 112298331 . T . PASS END=112298331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 112298332 . C . PASS END=112298332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:26,0 chr1 112298333 . A . PASS END=112298334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 112298547 . A . PASS END=112298563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 112298564 . A . PASS END=112298580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 112298581 . C . PASS END=112298581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 112298582 . A G, 49.13 PASS DP=10;MQ=250.00;MQRankSum=2.383;ReadPosRankSum=1.447;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:6,4,0:0.400,0.000:10:2,4,0:4,0,0:48:84,0,50,143,215,358:125,0,203:5,0:4.9126e+01,7.4811e-05,5.3000e+01,1.4309e+02,2.4934e+02,3.6066e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,2,2:4,2,2,2:112298582 chr1 112298583 . G . PASS END=112298584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 112298585 . A . PASS END=112298585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 112298586 . G . PASS END=112298590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 112298591 . G C, 45.16 PASS DP=11;MQ=250.00;MQRankSum=2.262;ReadPosRankSum=1.708;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:8,3,0:0.273,0.000:11:3,3,0:5,0,0:44:80,0,50,107,257,365:83,0,255:5,0:4.5161e+01,1.5402e-04,5.3000e+01,1.0730e+02,2.9204e+02,3.6758e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,2,1:4,4,2,1:112298582 chr1 112298592 . A . PASS END=112298593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 112298594 . T . PASS END=112298594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 112298595 . G . PASS END=112298608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 112298609 . G . PASS END=112298630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 112298631 . G . PASS END=112298656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr1 112298657 . G . PASS END=112298660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 112298661 . A . PASS END=112298678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 112298679 . G . PASS END=112298680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 112298681 . T . PASS END=112298681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 112298682 . C . PASS END=112298700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 112298701 . G . PASS END=112298701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr1 112298702 . C . PASS END=112298709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:16,0 chr1 112298710 . A . PASS END=112298711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 112298712 . G . PASS END=112298762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,645:0,41,255:19,0 chr1 112298763 . G . PASS END=112298763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112298764 . T . PASS END=112298764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:18,0 chr1 112298765 . G . PASS END=112298766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112298767 . T . PASS END=112298767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr1 112298768 . G . PASS END=112298774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 112298775 . C . PASS END=112298775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr1 112298776 . T . PASS END=112298788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 112298789 . C . PASS END=112298789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 112298790 . T . PASS END=112298791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 112298792 . C . PASS END=112298792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 112298793 . G . PASS END=112298793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 112298794 . A . PASS END=112298799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:23,0 chr1 112298800 . C . PASS END=112298803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 112298804 . G . PASS END=112298805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112298806 . C . PASS END=112298806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 112298807 . G . PASS END=112298808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 112298809 . T . PASS END=112298810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 112298811 . C . PASS END=112298811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 112298812 . A . PASS END=112298813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 112298814 . C . PASS END=112298814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112298815 . T . PASS END=112298823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:19,0 chr1 112298824 . T . PASS END=112298824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:16,0 chr1 112298825 . C . PASS END=112298826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 112298827 . C . PASS END=112298827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:16,0 chr1 112298828 . G . PASS END=112298828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 112298829 . T C, 46.24 PASS DP=18;MQ=250.00;MQRankSum=3.325;ReadPosRankSum=3.325;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,6,0:0.333,0.000:18:5,3,0:7,3,0:45:81,0,50,207,343,549:215,0,255:12,0:4.6240e+01,1.2503e-04,5.3000e+01,2.0658e+02,3.7754e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,5,1:7,5,2,4 chr1 112298830 . T . PASS END=112298837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:18,0 chr1 112298838 . T . PASS END=112298838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:13,0 chr1 112298839 . G . PASS END=112298839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:14,0 chr1 112298840 . C . PASS END=112298840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:14,0 chr1 112298841 . G . PASS END=112298844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:15,0 chr1 112298845 . T . PASS END=112298847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,41,255:12,0 chr1 112299268 . A . PASS END=112299362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:40:0,81,1421:0,81,255:40,0 chr1 112302022 . A . PASS END=112302190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:90:43:0,90,1368:0,90,255:40,0 chr1 112303096 . G . PASS END=112303123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:35:0,80,1235:0,80,255:39,0 chr1 112303124 . C . PASS END=112303210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:39:0,89,1414:0,89,255:40,0 chr1 112303328 . T . PASS END=112303470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,153,255:40,0 chr1 112303609 . G . PASS END=112303747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,178,255:40,1 chr1 112303848 . A . PASS END=112303906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,199,255:40,0 chr1 112304877 . G . PASS END=112304959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,166,255:40,0 chr1 112305299 . A . PASS END=112305360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,137,255:40,0 chr1 112305361 . T . PASS END=112305392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:54:0,81,1215:0,111,255:40,0 chr1 112305393 . C . PASS END=112305404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:69:52:0,69,1035:0,114,255:26,0 chr1 112305494 . A . PASS END=112305629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:41:0,82,1324:0,82,255:40,0 chr1 112308359 . A . PASS END=112308783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:35:0,80,1258:0,80,255:40,0 chr1 112308784 . T . PASS END=112308820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1056:0,81,255:36,0 chr1 112308821 . C A, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.539;ReadPosRankSum=3.442;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,16,0:0.552,0.000:29:6,8,0:7,8,0:48:85,0,49,543,465,1008:255,0,255:13,0:5.0000e+01,6.8339e-05,5.2409e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,10,6:7,6,6,10 chr1 112308822 . T . PASS END=112308824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:31,0 chr1 112308825 . A . PASS END=112308825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 112308826 . T . PASS END=112308836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1186:0,83,255:32,0 chr1 112308837 . T . PASS END=112308837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:31,0 chr1 112308838 . T . PASS END=112308858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1256:0,89,255:35,0 chr1 112308859 . G . PASS END=112308915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:36:0,91,1242:0,91,255:40,0 chr1 112308916 . G . PASS END=112308952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,116,1563:0,116,255:40,0 chr1 112308953 . T C, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.415;ReadPosRankSum=3.417;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:15,10,0:13,18,0:48:85,0,50,1001,985,1987:255,0,255:28,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,19,9:16,12,11,17 chr1 112308954 . T . PASS END=112308971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:57:0,120,1800:0,139,255:40,0 chr1 112308972 . G A, 49.97 PASS DP=63;MQ=250.00;MQRankSum=6.812;ReadPosRankSum=2.921;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,31,0:0.492,0.000:63:16,13,0:16,18,0:48:85,0,50,1079,1139,2218:255,0,255:30,0:4.9970e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,19,20,11:17,15,16,15 chr1 112308973 . T . PASS END=112309009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,167,255:40,0 chr1 112309010 . A . PASS END=112309228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,128,255:40,0 chr1 112309229 . G . PASS END=112309265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,153,255:40,0 chr1 112309266 . G C, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.293;ReadPosRankSum=4.319;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,28,0:0.519,0.000:54:16,21,0:10,7,0:48:85,0,50,993,897,1891:255,0,255:25,0:5.0000e+01,6.6010e-05,5.2857e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,14,11,17:12,14,14,14 chr1 112309267 . C . PASS END=112309303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,137,255:40,0 chr1 112309304 . A . PASS END=112309378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1355:0,104,255:40,0 chr1 112309379 . G . PASS END=112309380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:34:0,75,1125:0,102,255:26,0 chr1 112309381 . G . PASS END=112309383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 112309384 . T . PASS END=112309384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 112309385 . A . PASS END=112309499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1186:0,83,255:40,0 chr1 112309500 . A . PASS END=112309500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 112309501 . A . PASS END=112309508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1242:0,91,255:35,0 chr1 112309509 . T . PASS END=112309509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:30,0 chr1 112309510 . A . PASS END=112309518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1260:0,96,255:32,0 chr1 112309519 . T . PASS END=112309521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 112318699 . T . PASS END=112318710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,754:0,63,255:26,0 chr1 112318711 . G . PASS END=112318711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 112318712 . A . PASS END=112318713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,812:0,64,255:27,0 chr1 112318714 . C . PASS END=112318723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 112318724 . T . PASS END=112318724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 112318725 . T . PASS END=112318725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 112318726 . G . PASS END=112318726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 112318727 . C . PASS END=112318729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 112318730 . G . PASS END=112318730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 112318731 . C . PASS END=112318734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 112318735 . G . PASS END=112318735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 112318736 . G . PASS END=112318738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 112318739 . G . PASS END=112318741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1022:0,68,255:27,0 chr1 112318742 . A . PASS END=112318742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:27,0 chr1 112318743 . T . PASS END=112318744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:28,0 chr1 112318745 . T . PASS END=112318745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,873:0,45,255:27,0 chr1 112318746 . T . PASS END=112318746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 112318747 . C . PASS END=112318747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 112318748 . G . PASS END=112318748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 112318749 . T . PASS END=112318749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr1 112318750 . G . PASS END=112318750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 112318751 . T . PASS END=112318751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 112318752 . T . PASS END=112318754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 112318755 . G . PASS END=112318755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 112318756 . G . PASS END=112318756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 112318757 . C . PASS END=112318758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1022:0,68,255:27,0 chr1 112318759 . T . PASS END=112318762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 112318763 . C . PASS END=112318763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 112318764 . T . PASS END=112318767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 112318768 . A . PASS END=112318768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 112318769 . G . PASS END=112318779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:33,0 chr1 112318780 . A . PASS END=112318780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 112318781 . C . PASS END=112318783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr1 112318784 . T . PASS END=112318784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:32,0 chr1 112318785 . C . PASS END=112318860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:35:0,81,1168:0,81,255:38,0 chr1 112318861 . T . PASS END=112318861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1218:0,69,255:34,0 chr1 112318862 . C . PASS END=112318878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1250:0,89,255:35,0 chr1 112318879 . T . PASS END=112318879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:33,0 chr1 112318880 . T . PASS END=112318880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 112318881 . T . PASS END=112318882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1201:0,66,255:32,0 chr1 112318883 . A . PASS END=112318883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1192:0,50,255:31,0 chr1 112318884 . A . PASS END=112318900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 112319648 . C . PASS END=112319649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1146:0,93,255:31,0 chr1 112319650 . G . PASS END=112319650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 112319651 . G . PASS END=112319652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr1 112319653 . T . PASS END=112319653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:29,0 chr1 112319654 . G . PASS END=112319874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:31:0,82,1125:0,82,255:40,0 chr1 112319875 . C . PASS END=112319875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 112319876 . T . PASS END=112319880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 112319881 . A . PASS END=112319881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 112319882 . A . PASS END=112319885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 112319886 . A . PASS END=112319886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:28,0 chr1 112319887 . C . PASS END=112319894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr1 112319895 . T . PASS END=112319895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:25,0 chr1 112321054 . A . PASS END=112321054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 112321058 . C . PASS END=112321114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,178,255:40,0 chr1 112322847 . A . PASS END=112322847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 112322848 . G . PASS END=112322865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,866:0,84,255:30,0 chr1 112322866 . T . PASS END=112322866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 112322867 . G . PASS END=112322896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1152:0,93,255:33,0 chr1 112322897 . G . PASS END=112322907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 112322908 . T . PASS END=112322928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:19,0 chr1 112322929 . G . PASS END=112322929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 112322930 . G . PASS END=112322930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 112322931 . G . PASS END=112322931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 112322932 . G . PASS END=112322936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 112322941 . T . PASS END=112322941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 112323312 . C . PASS END=112323323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1266:0,102,255:35,0 chr1 112323324 . C . PASS END=112323324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:34,0 chr1 112323325 . G . PASS END=112323413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,104,255:40,0 chr1 112329560 . G . PASS END=112329560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 112329566 . C . PASS END=112329727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1133:0,80,255:40,0 chr1 112329728 . T . PASS END=112329728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1307:0,78,255:33,0 chr1 112373750 . T . PASS END=112373753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 112438592 . T . PASS END=112438613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,108,1620:0,113,255:40,0 chr1 112476783 . T . PASS END=112476786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 112505001 . T . PASS END=112505058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,105,1382:0,109,255:40,0 chr1 112519513 . T . PASS END=112519519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr1 112519520 . C . PASS END=112519520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 112519521 . T . PASS END=112519521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 112519522 . G . PASS END=112519577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,986:0,81,255:37,0 chr1 112519578 . C . PASS END=112519579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:33,0 chr1 112519580 . T . PASS END=112519581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 112519582 . G . PASS END=112519582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:31,0 chr1 112519583 . T . PASS END=112519584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1341:0,95,255:32,0 chr1 112519585 . G . PASS END=112519588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:36:0,61,1170:0,61,255:31,0 chr1 112519589 . T . PASS END=112519589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 112519590 . G . PASS END=112519591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:27,0 chr1 112519592 . A . PASS END=112519592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:27,0 chr1 112519593 . G . PASS END=112519593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:26,0 chr1 112519594 . T . PASS END=112519595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 112519596 . C . PASS END=112519596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:27,0 chr1 112519597 . T . PASS END=112519601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:28,0 chr1 112519602 . C . PASS END=112519630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,68,255:27,0 chr1 112524243 . C . PASS END=112524243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 112524244 . C . PASS END=112524244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 112524245 . C . PASS END=112524259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:24:0,71,856:0,71,255:27,0 chr1 112524260 . G . PASS END=112524274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 112524275 . A . PASS END=112524275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 112524276 . A . PASS END=112524297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1109:0,80,255:33,0 chr1 112524298 . A . PASS END=112524298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:29,0 chr1 112524299 . C . PASS END=112524305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 112524306 . G . PASS END=112524306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 112524307 . C . PASS END=112524307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 112524308 . C . PASS END=112524308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 112524309 . G . PASS END=112524312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 112524313 . A . PASS END=112524316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 112524317 . C . PASS END=112524318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 112524319 . T . PASS END=112524319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:26,0 chr1 112524320 . C . PASS END=112524326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 112524327 . T . PASS END=112524332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,994:0,70,255:24,0 chr1 112524333 . A . PASS END=112524333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:22,0 chr1 112524334 . T . PASS END=112524342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,878:0,62,255:25,0 chr1 112524343 . C . PASS END=112524343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:30:26:0,30,703:0,30,255:23,0 chr1 112524344 . A . PASS END=112524352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,758:0,61,255:25,0 chr1 112524353 . G . PASS END=112524353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:21,0 chr1 112524354 . A . PASS END=112524354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,707:0,19,255:19,0 chr1 112524355 . T . PASS END=112524357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 112524358 . C . PASS END=112524358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:21,0 chr1 112524359 . C . PASS END=112524374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 112524375 . A . PASS END=112524381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 112524382 . A . PASS END=112524440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr1 112524441 . T . PASS END=112524452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 112524453 . T . PASS END=112524460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 112524461 . C . PASS END=112524462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 112524463 . T . PASS END=112524463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 112524464 . G . PASS END=112524497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,986:0,80,255:32,0 chr1 112524498 . C . PASS END=112524498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 112524499 . C . PASS END=112524500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 112524501 . G . PASS END=112524501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 112524502 . A . PASS END=112524510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1133:0,80,255:31,0 chr1 112524511 . C . PASS END=112524511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 112524512 . G . PASS END=112524519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1058:0,93,255:31,0 chr1 112524520 . T . PASS END=112524531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,65,255:26,0 chr1 112524532 . C . PASS END=112524539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,59,255:19,0 chr1 112524540 . T . PASS END=112524548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:24,0 chr1 112524549 . A . PASS END=112524549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,756:0,33,255:23,0 chr1 112524550 . T . PASS END=112524564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:24,0 chr1 112524565 . T . PASS END=112524565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:21,0 chr1 112524566 . G . PASS END=112524566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 112524567 . A . PASS END=112524567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 112524568 . T . PASS END=112524568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 112524569 . G . PASS END=112524584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,808:0,66,255:22,0 chr1 112524585 . A . PASS END=112524585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 112524586 . T . PASS END=112524588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 112524589 . A . PASS END=112524589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 112524590 . G . PASS END=112524594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112524595 . A . PASS END=112524595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 112524596 . G . PASS END=112524599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 112524600 . C . PASS END=112524600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 112524601 . T . PASS END=112524602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 112524603 . G . PASS END=112524603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 112524604 . G . PASS END=112524605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 112524606 . G . PASS END=112524606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 112524607 . C . PASS END=112524613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 112524614 . G . PASS END=112524627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,790:0,50,255:19,0 chr1 112524628 . A . PASS END=112524635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 112524636 . G . PASS END=112524636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 112524637 . T . PASS END=112524637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 112524638 . G . PASS END=112524648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 112524649 . C . PASS END=112524649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 112524650 . G . PASS END=112524650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 112524651 . C . PASS END=112524651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 112524652 . A . PASS END=112524652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 112524653 . C . PASS END=112524660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 112524661 . C . PASS END=112524661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 112524662 . C . PASS END=112524671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:23,0 chr1 112524672 . A . PASS END=112524672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:22,0 chr1 112524673 . A . PASS END=112524681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr1 112524682 . A . PASS END=112524682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 112524683 . G . PASS END=112524683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 112524684 . T . PASS END=112524697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,721:0,47,255:19,0 chr1 112524698 . C . PASS END=112524702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112524703 . G . PASS END=112524703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 112524704 . C . PASS END=112524704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 112524705 . T . PASS END=112524722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,651:0,41,255:19,0 chr1 112524723 . G . PASS END=112524731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 112524732 . G . PASS END=112524732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 112524733 . G . PASS END=112524738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 112524739 . T . PASS END=112524739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,801:0,44,255:21,0 chr1 112524740 . C . PASS END=112524764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 112524765 . A . PASS END=112524765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 112524766 . C . PASS END=112524778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 112524779 . G . PASS END=112524779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 112524780 . C . PASS END=112524780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 112524781 . C . PASS END=112524782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 112524783 . G . PASS END=112524845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,856:0,62,255:26,0 chr1 112524846 . G . PASS END=112524846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 112524847 . T . PASS END=112524849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 112524850 . G . PASS END=112524862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 112524863 . C . PASS END=112524908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,872:0,64,255:26,0 chr1 112524909 . A . PASS END=112524909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:24,0 chr1 112524910 . G . PASS END=112524910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 112524911 . C . PASS END=112524914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 112524915 . T . PASS END=112524915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 112524916 . C . PASS END=112524921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,938:0,81,255:27,0 chr1 112524922 . T . PASS END=112524934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,840:0,64,255:26,0 chr1 112524935 . G . PASS END=112524935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 112524936 . T . PASS END=112524947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,67,255:22,0 chr1 112524948 . T . PASS END=112524948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 112524949 . C . PASS END=112524952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 112524953 . G . PASS END=112524953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,782:0,42,255:20,0 chr1 112524954 . C . PASS END=112524956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 112524957 . C . PASS END=112524959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,779:0,58,255:20,0 chr1 112524960 . T . PASS END=112524966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:23,0 chr1 112524967 . T . PASS END=112524967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 112524968 . G . PASS END=112524969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112524970 . T . PASS END=112524970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 112524971 . C . PASS END=112524971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr1 112524972 . T . PASS END=112524972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 112524973 . C . PASS END=112524974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112524975 . G . PASS END=112524975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 112524976 . G . PASS END=112524978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112524979 . G . PASS END=112524979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:21,0 chr1 112524980 . G . PASS END=112524980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 112524981 . A . PASS END=112524981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 112524982 . T . PASS END=112524982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112524983 . G . PASS END=112524983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 112524984 . C . PASS END=112524988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 112524989 . G . PASS END=112524989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 112524990 . A . PASS END=112524990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 112524991 . A . PASS END=112524992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 112524993 . G . PASS END=112524996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 112524997 . G . PASS END=112524997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 112524998 . C . PASS END=112524999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112525000 . C . PASS END=112525003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 112525004 . G . PASS END=112525006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 112525007 . G . PASS END=112525007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 112525008 . T . PASS END=112525016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 112525017 . A . PASS END=112525017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:20,0 chr1 112525018 . T . PASS END=112525018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 112525019 . G . PASS END=112525019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 112525020 . C . PASS END=112525023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 112525024 . C . PASS END=112525024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 112525025 . G . PASS END=112525055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,839:0,61,255:26,0 chr1 112525056 . T . PASS END=112525066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:27,0 chr1 112525067 . C . PASS END=112525067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:25,0 chr1 112525068 . A . PASS END=112525068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 112525069 . C . PASS END=112525071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,1002:0,70,255:26,0 chr1 112525072 . A . PASS END=112525087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 112525088 . G . PASS END=112525111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,906:0,62,255:26,0 chr1 112525112 . G . PASS END=112525112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 112525113 . G . PASS END=112525113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 112525114 . T . PASS END=112525115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 112525116 . T . PASS END=112525132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,812:0,72,255:25,0 chr1 112525133 . C . PASS END=112525145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:29,0 chr1 112525146 . C . PASS END=112525147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 112525148 . G . PASS END=112525153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 112525154 . C . PASS END=112525173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 112525174 . C . PASS END=112525179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 112525180 . T . PASS END=112525181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 112525182 . G . PASS END=112525193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 112525194 . T . PASS END=112525220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 112525221 . A . PASS END=112525229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 112525230 . T . PASS END=112525242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 112525243 . T . PASS END=112525254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 112525255 . C . PASS END=112525255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 112525256 . C . PASS END=112525256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr1 112525257 . G . PASS END=112525262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:23,0 chr1 112525263 . A . PASS END=112525266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,853:0,56,255:19,0 chr1 112525267 . G . PASS END=112525270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 112525271 . G . PASS END=112525271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 112525272 . G . PASS END=112525277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,61,255:22,0 chr1 112525278 . T . PASS END=112525283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,768:0,52,255:19,0 chr1 112525284 . A . PASS END=112525286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 112525287 . G . PASS END=112525306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 112525307 . A . PASS END=112525307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:16,0 chr1 112525308 . G . PASS END=112525312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 112525313 . G . PASS END=112525313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 112525314 . G . PASS END=112525348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr1 112533519 . A . PASS END=112533562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 112533563 . T . PASS END=112533563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 112533564 . G . PASS END=112533573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 112533574 . G . PASS END=112533574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 112533575 . C . PASS END=112533587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 112533588 . G . PASS END=112533603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 112533604 . C . PASS END=112533604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr1 112533605 . A . PASS END=112533606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 112533607 . A . PASS END=112533607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 112533608 . T . PASS END=112533613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 112533614 . C . PASS END=112533645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:19,0 chr1 112533646 . C . PASS END=112533660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 112533661 . G . PASS END=112533668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 112533669 . G . PASS END=112533685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 112533686 . G . PASS END=112533718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 112533719 . C . PASS END=112533719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 112533720 . G . PASS END=112533726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 112533727 . C . PASS END=112533727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 112533728 . G . PASS END=112533736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 112533737 . G . PASS END=112533737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 112533738 . C . PASS END=112533740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 112533741 . G . PASS END=112533744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr1 112533745 . G . PASS END=112533753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 112533754 . C . PASS END=112533783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 112533784 . G . PASS END=112533792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 112533793 . T . PASS END=112533793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 112533794 . T . PASS END=112533797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 112533798 . G . PASS END=112533809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 112539049 . A . PASS END=112539050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 112539051 . T . PASS END=112539055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 112539056 . A . PASS END=112539060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 112539061 . A G, 49.91 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=1.939;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:6,4,0:6,7,0:48:85,0,50,394,429,823:255,0,255:12,0:4.9906e+01,6.6010e-05,5.3000e+01,3.9350e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,6,5:4,8,7,4 chr1 112539062 . T . PASS END=112539068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 112539069 . A . PASS END=112539069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 112539070 . A . PASS END=112539077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,881:0,72,255:26,0 chr1 112539078 . T . PASS END=112539086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 112539087 . A . PASS END=112539089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:26,0 chr1 112539090 . G . PASS END=112539092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 112539093 . A . PASS END=112539098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1008:0,68,255:26,0 chr1 112539099 . T . PASS END=112539122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,923:0,64,255:26,0 chr1 112539123 . T . PASS END=112539123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 112539124 . G . PASS END=112539135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 112958788 . A . PASS END=112958855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,131,255:40,0 chr1 112958856 . A . PASS END=112958886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:43:0,90,1440:0,90,255:40,0 chr1 112991564 . G . PASS END=112991564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 112991565 . C . PASS END=112991660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:28:0,80,1025:0,80,255:40,0 chr1 112991661 . A . PASS END=112991697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:43:0,108,1600:0,108,255:40,0 chr1 112991698 . T C, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.415;ReadPosRankSum=0.163;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,27,0:0.628,0.000:43:7,16,0:9,11,0:45:85,0,43,185,185,185:255,0,255:14,0:5.0000e+01,1.4522e-04,4.6300e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,10,11,16:9,7,18,9 chr1 112991699 . C . PASS END=112991735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,89,255:39,0 chr1 112991736 . A . PASS END=112991736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:29,0 chr1 112991737 . G . PASS END=112991745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:29,0 chr1 112991746 . G . PASS END=112991769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:25,0 chr1 112991770 . T . PASS END=112991779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,775:0,50,255:19,0 chr1 112991780 . A . PASS END=112991781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 112991782 . C . PASS END=112991782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 112991783 . A . PASS END=112991785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 112991786 . C . PASS END=112991794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 112997071 . G . PASS END=112997164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,119,1643:0,119,255:40,0 chr1 112997165 . G . PASS END=112997165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,8:63:55:63:0,55,1642:0,55,255:40,0 chr1 112997166 . G . PASS END=112997178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,105,1800:0,105,255:40,0 chr1 112998553 . T . PASS END=112998554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1135:0,85,255:33,0 chr1 112998555 . G . PASS END=112998555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1193:0,55,255:32,0 chr1 112998556 . G . PASS END=112998556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1263:0,86,255:33,0 chr1 112998557 . A . PASS END=112998557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:32,0 chr1 112998558 . A . PASS END=112998558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1255:0,86,255:32,0 chr1 112998559 . T . PASS END=112998559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:32:34:0,32,969:0,32,255:32,0 chr1 112998560 . T . PASS END=112998560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:33,0 chr1 112998561 . T . PASS END=112998561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 112998562 . G . PASS END=112998562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1109:0,47,255:32,0 chr1 112998563 . A . PASS END=112998567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:33,0 chr1 112998568 . T . PASS END=112998568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:32,0 chr1 112998569 . C . PASS END=112998569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr1 112998570 . C . PASS END=112998571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 112998572 . A . PASS END=112998572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1117:0,47,255:32,0 chr1 112998573 . A . PASS END=112998573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1134:0,85,255:33,0 chr1 112998574 . G . PASS END=112998574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:29,0 chr1 112998575 . T . PASS END=112998575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:30,0 chr1 112998576 . G . PASS END=112998576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:29,0 chr1 112998577 . A . PASS END=112998577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1108:0,55,255:28,0 chr1 112998578 . A . PASS END=112998581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:30,0 chr1 112998582 . G . PASS END=112998582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1178:0,53,255:30,0 chr1 112998583 . T . PASS END=112998585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1179:0,91,255:31,0 chr1 112998586 . G . PASS END=112998586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:29,0 chr1 112998587 . A . PASS END=112998587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:28,0 chr1 112998588 . A . PASS END=112998591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,91,255:29,0 chr1 112998592 . G . PASS END=112998593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:60:33:0,60,1117:0,60,255:28,0 chr1 112998594 . A . PASS END=112998594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 112998595 . C . PASS END=112998595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:29,0 chr1 112998596 . A . PASS END=112998596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1255:0,86,255:29,0 chr1 112998597 . G . PASS END=112998597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1177:0,55,255:30,0 chr1 112998598 . A . PASS END=112998598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:30,0 chr1 112998599 . A . PASS END=112998599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 112998600 . G . PASS END=112998600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1155:0,52,255:30,0 chr1 112998601 . A . PASS END=112998604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:31,0 chr1 112998605 . T . PASS END=112998605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1226:0,69,255:31,0 chr1 112998606 . C . PASS END=112998610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1226:0,94,255:32,0 chr1 112998611 . G . PASS END=112998612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:70:36:0,70,1294:0,70,255:32,0 chr1 112998613 . C . PASS END=112998614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1302:0,89,255:31,0 chr1 112998615 . G . PASS END=112998615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 112998616 . C . PASS END=112998616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:31,0 chr1 112998617 . T . PASS END=112998617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:27,0 chr1 112998618 . G . PASS END=112998619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,89,255:28,0 chr1 112998620 . A . PASS END=112998620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1186:0,53,255:26,0 chr1 112998621 . A . PASS END=112998621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 112998622 . G . PASS END=112998623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:67:38:0,67,1244:0,67,255:28,0 chr1 112998624 . G . PASS END=112998625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:37:0,87,1305:0,95,255:31,0 chr1 112998626 . A . PASS END=112998626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:31,0 chr1 112998627 . G . PASS END=112998627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:38:0,87,1305:0,98,255:29,0 chr1 112998628 . C . PASS END=112998630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 112998631 . T . PASS END=112998632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1270:0,89,255:31,0 chr1 112998633 . C . PASS END=112998633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:31,0 chr1 112998634 . C . PASS END=112998637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1332:0,92,255:31,0 chr1 112998638 . A . PASS END=112998639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1166:0,64,255:31,0 chr1 112998640 . A . PASS END=112998856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1302:0,81,255:40,0 chr1 112998857 . A . PASS END=112998857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:29,0 chr1 112998858 . A . PASS END=112998868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1172:0,85,255:34,0 chr1 112998869 . A . PASS END=112998869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1101:0,69,255:32,0 chr1 112998870 . A . PASS END=112998885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1183:0,102,255:34,0 chr1 112998886 . A . PASS END=112998886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:32,0 chr1 112998887 . A . PASS END=112999016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,99,1305:0,99,255:40,0 chr1 112999017 . A . PASS END=112999017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1463:0,69,255:38,0 chr1 112999018 . A . PASS END=112999050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,103,1381:0,103,255:40,0 chr1 112999051 . C . PASS END=112999051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1388:0,73,255:38,0 chr1 112999052 . A . PASS END=112999074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,106,1361:0,106,255:40,0 chr1 112999075 . A . PASS END=112999075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:63:43:0,63,1408:0,63,255:37,0 chr1 112999076 . G . PASS END=112999189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:39:0,87,1419:0,87,255:40,0 chr1 112999190 . C . PASS END=112999226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,108,1612:0,113,255:40,0 chr1 112999227 . G A, 175.49 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,18,0:0,25,0:125:213,128,0,1593,128,1593:255,129,0:0,0:1.7549e+02,1.2549e+02,0.0000e+00,4.5000e+02,1.6026e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,22:0,0,20,23 chr1 112999228 . G . PASS END=112999264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,113,1604:0,113,255:40,0 chr1 112999265 . A . PASS END=112999344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1260:0,96,255:40,0 chr1 112999345 . A . PASS END=112999346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 112999347 . C . PASS END=112999410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1120:0,88,255:33,0 chr1 112999411 . C . PASS END=112999412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 112999413 . C . PASS END=112999426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 112999427 . T . PASS END=112999427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 112999428 . G . PASS END=112999459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1147:0,90,255:32,0 chr1 112999460 . C . PASS END=112999460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 112999461 . A . PASS END=112999556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1162:0,86,255:35,0 chr1 112999557 . C . PASS END=112999557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr1 112999558 . C . PASS END=112999567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:35:0,96,1396:0,98,255:34,0 chr1 112999568 . G . PASS END=112999568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:32,0 chr1 112999569 . G . PASS END=112999581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1327:0,95,255:36,0 chr1 112999582 . A . PASS END=112999582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:29,0 chr1 112999583 . C . PASS END=112999594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1139:0,90,255:31,0 chr1 112999595 . A . PASS END=112999595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 112999596 . C . PASS END=112999596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:31,0 chr1 112999597 . T . PASS END=112999597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:30,0 chr1 112999598 . C . PASS END=112999621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:33,0 chr1 112999622 . A . PASS END=112999624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 112999625 . C . PASS END=112999625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 112999626 . A . PASS END=112999626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 112999627 . G . PASS END=112999627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 112999628 . T . PASS END=112999630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 112999631 . C . PASS END=112999674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1109:0,80,255:34,0 chr1 112999675 . C . PASS END=112999675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 112999676 . C . PASS END=112999676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 112999677 . A . PASS END=112999679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 112999680 . C . PASS END=112999685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 112999686 . C . PASS END=112999686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 112999687 . A . PASS END=112999687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 112999688 . A . PASS END=112999688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 112999689 . C . PASS END=112999689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 112999690 . A . PASS END=112999690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:27,0 chr1 112999691 . G . PASS END=112999691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 112999692 . C . PASS END=112999692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr1 112999693 . T . PASS END=112999694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 112999695 . T . PASS END=112999703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 112999704 . C . PASS END=112999704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:25,0 chr1 112999705 . A . PASS END=112999716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 112999717 . A . PASS END=112999718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,868:0,48,255:24,0 chr1 112999719 . T . PASS END=112999722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,953:0,65,255:25,0 chr1 112999723 . G . PASS END=112999723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 112999724 . C . PASS END=112999736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,872:0,62,255:26,0 chr1 112999737 . T . PASS END=112999737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 112999738 . C . PASS END=112999738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 112999739 . C . PASS END=112999744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 112999745 . G . PASS END=112999747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 112999748 . A . PASS END=112999757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:27,0 chr1 112999758 . T . PASS END=112999759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 112999760 . C . PASS END=112999763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 112999764 . T . PASS END=112999764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 112999765 . A . PASS END=112999766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 112999767 . T . PASS END=112999767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1061:0,46,255:23,0 chr1 112999768 . C . PASS END=112999776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,67,255:25,0 chr1 112999777 . G . PASS END=112999782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 112999783 . A . PASS END=112999783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:19,0 chr1 112999784 . G . PASS END=112999785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr1 112999786 . C . PASS END=112999797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 112999798 . C . PASS END=112999822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:40:19:0,40,635:0,40,255:19,0 chr1 112999823 . C . PASS END=112999836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 112999837 . G . PASS END=112999837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 112999838 . A . PASS END=112999839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 112999840 . A . PASS END=112999841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 112999842 . A . PASS END=112999845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 112999846 . A . PASS END=112999851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,662:0,46,255:18,0 chr1 112999852 . C . PASS END=112999870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,793:0,66,255:23,0 chr1 112999871 . A . PASS END=112999871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,790:0,38,255:22,0 chr1 112999872 . A . PASS END=112999945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,845:0,69,255:26,0 chr1 112999946 . C . PASS END=112999954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr1 112999955 . A . PASS END=112999955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 112999956 . C . PASS END=112999971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 112999972 . T . PASS END=113000024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,61,255:26,0 chr1 113000025 . C . PASS END=113000034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,720:0,47,255:20,0 chr1 113010160 . A . PASS END=113010213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:70:0,120,1800:0,164,255:40,0 chr1 113033633 . A . PASS END=113033703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,105,1405:0,111,255:40,0 chr1 113051885 . A . PASS END=113051886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,666:0,44,255:19,0 chr1 113051887 . G . PASS END=113051887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 113051888 . C . PASS END=113051888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 113051889 . T . PASS END=113051892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:22,0 chr1 113051893 . A . PASS END=113051893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 113051894 . C . PASS END=113051928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:23,0 chr1 113051929 . T . PASS END=113051929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 113051930 . C . PASS END=113051971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 113051972 . C . PASS END=113051972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 113051973 . C . PASS END=113051975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 113051976 . A . PASS END=113051976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 113051977 . C . PASS END=113051984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr1 113051985 . G . PASS END=113051985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:20,0 chr1 113051986 . G . PASS END=113051987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 113051988 . C . PASS END=113051988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 113051989 . T . PASS END=113052000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 113052001 . A . PASS END=113052001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 113052002 . G . PASS END=113052004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 113052005 . C . PASS END=113052005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 113052006 . T . PASS END=113052011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 113052012 . G . PASS END=113052012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 113052013 . C . PASS END=113052013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 113052014 . C . PASS END=113052014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 113052015 . T . PASS END=113052015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 113052016 . T . PASS END=113052040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:19,0 chr1 113052041 . C . PASS END=113052041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 113052042 . C . PASS END=113052047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr1 113052048 . G . PASS END=113052048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 113052049 . C . PASS END=113052060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:17,0 chr1 113052061 . C . PASS END=113052066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 113057496 . G . PASS END=113057502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr1 113057503 . G . PASS END=113057515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:19,0 chr1 113057516 . C . PASS END=113057527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:22,0 chr1 113057528 . G . PASS END=113057528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 113057529 . T . PASS END=113057534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,756:0,66,255:24,0 chr1 113057535 . T . PASS END=113057535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 113057536 . A . PASS END=113057541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:25,0 chr1 113057542 . G . PASS END=113057544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113057545 . T . PASS END=113057545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:26,0 chr1 113057546 . T . PASS END=113057561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:29,0 chr1 113057562 . G . PASS END=113057562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 113057563 . C . PASS END=113057679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:30:0,85,1296:0,85,255:40,0 chr1 113057680 . C . PASS END=113057680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:31,0 chr1 113057681 . G . PASS END=113057692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1350:0,99,255:33,0 chr1 113057693 . T . PASS END=113057693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1016:0,60,255:29,0 chr1 113057694 . C . PASS END=113057701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr1 113057702 . G . PASS END=113057716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:26:0,72,1055:0,74,255:26,0 chr1 113058762 . G . PASS END=113058762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 113058763 . T . PASS END=113058774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 113058775 . A . PASS END=113058776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 113058777 . C . PASS END=113058778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 113058779 . T . PASS END=113058779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 113058780 . T . PASS END=113058787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 113058788 . G . PASS END=113058789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 113058790 . C . PASS END=113058790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 113058791 . A . PASS END=113058803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:19,0 chr1 113058804 . G . PASS END=113058830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr1 113058831 . G . PASS END=113058831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 113058832 . T . PASS END=113058857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,850:0,72,255:26,0 chr1 113058858 . G . PASS END=113058862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 113058863 . G . PASS END=113058864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113058865 . C . PASS END=113058865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113058866 . C . PASS END=113058867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 113058868 . C . PASS END=113058937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:34,0 chr1 113058938 . T . PASS END=113058980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 113058981 . A . PASS END=113058993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,55,255:19,0 chr1 113058994 . T . PASS END=113058994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 113058995 . G . PASS END=113058996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 113058997 . C . PASS END=113058997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 113058998 . C . PASS END=113058998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 113058999 . G . PASS END=113059004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 113059005 . T . PASS END=113059019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:17,0 chr1 113059020 . A . PASS END=113059020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 113059021 . T . PASS END=113059021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 113059022 . A . PASS END=113059022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 113059023 . A . PASS END=113059039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 113059743 . G . PASS END=113059745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,706:0,57,255:19,0 chr1 113059746 . G . PASS END=113059762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 113059763 . G . PASS END=113059763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:22,0 chr1 113059764 . C . PASS END=113059764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 113059765 . T . PASS END=113059765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 113059766 . G . PASS END=113059775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,837:0,69,255:26,0 chr1 113059776 . T . PASS END=113059779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 113059780 . A . PASS END=113059780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 113059781 . T . PASS END=113059783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 113059784 . C . PASS END=113059784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 113059785 . G . PASS END=113059790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 113059791 . G . PASS END=113059824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,963:0,78,255:26,0 chr1 113059825 . T . PASS END=113059825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr1 113059826 . C . PASS END=113059834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 113059835 . C . PASS END=113059835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 113059836 . C . PASS END=113059855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,62,255:24,0 chr1 113059856 . G . PASS END=113059856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 113059857 . C . PASS END=113059859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 113059860 . C . PASS END=113059860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 113059861 . G . PASS END=113059862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 113059863 . C . PASS END=113059865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 113059866 . T . PASS END=113059866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 113059867 . A . PASS END=113059867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 113059868 . T . PASS END=113059868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 113059869 . G . PASS END=113059870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,975:0,45,255:25,0 chr1 113059871 . T . PASS END=113059872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 113059873 . G . PASS END=113059873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:22,0 chr1 113059874 . G . PASS END=113059875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:23,0 chr1 113059876 . C . PASS END=113059891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:22,0 chr1 113059892 . C . PASS END=113059893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 113059894 . C . PASS END=113059899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 113059900 . A . PASS END=113059901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 113059902 . G . PASS END=113059907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 113059908 . A . PASS END=113059916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:17,0 chr1 113059917 . G . PASS END=113059919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 113059920 . G . PASS END=113059929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:19,0 chr1 113059930 . G . PASS END=113059964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:23,0 chr1 113059965 . T . PASS END=113059965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 113059966 . T . PASS END=113059971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 113059972 . A . PASS END=113059972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 113059973 . C . PASS END=113059980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 113059981 . A . PASS END=113059983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 113059984 . A . PASS END=113059986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 113059987 . G . PASS END=113060004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 113060005 . C . PASS END=113060007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 113061033 . T . PASS END=113061038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,222,255:40,0 chr1 113062902 . G . PASS END=113062904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:19:0,46,714:0,46,255:20,0 chr1 113062905 . C . PASS END=113062907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 113062908 . T . PASS END=113062908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 113062909 . A . PASS END=113062917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 113062918 . A . PASS END=113062918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 113062919 . G . PASS END=113062933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 113062934 . A . PASS END=113062934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 113062935 . A . PASS END=113062958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,781:0,72,255:25,0 chr1 113062959 . G . PASS END=113062971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:27,0 chr1 113062972 . C . PASS END=113062973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113062974 . G . PASS END=113062977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113062978 . C . PASS END=113063012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 113063013 . C . PASS END=113063014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 113063015 . C . PASS END=113063016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:27:0,78,1170:0,81,255:26,0 chr1 113063017 . G . PASS END=113063017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 113063018 . T . PASS END=113063018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 113063019 . G . PASS END=113063020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 113063021 . G . PASS END=113063021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 113063022 . A . PASS END=113063028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 113063029 . A . PASS END=113063029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,875:0,70,255:28,0 chr1 113063030 . T . PASS END=113063036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 113063037 . G . PASS END=113063037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 113063038 . G . PASS END=113063039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 113063040 . G . PASS END=113063042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:25,0 chr1 113063043 . G . PASS END=113063087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:39:0,87,1404:0,87,255:40,0 chr1 113063088 . C . PASS END=113063124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,117,1755:0,131,255:40,0 chr1 113063125 . A G, 49.85 PASS DP=48;MQ=250.00;MQRankSum=5.923;ReadPosRankSum=2.538;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,23,0:0.479,0.000:48:12,15,0:13,8,0:48:85,0,50,814,886,1701:255,0,255:20,0:4.9848e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,14,9,14:12,13,7,16 chr1 113063126 . A . PASS END=113063131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,108,1620:0,132,255:39,0 chr1 113068635 . T . PASS END=113068663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1196:0,84,255:39,0 chr1 113068664 . A . PASS END=113068664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,0 chr1 113068665 . C . PASS END=113068722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,86,255:40,0 chr1 113068723 . A . PASS END=113068724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 113068725 . T . PASS END=113068729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 113068730 . G . PASS END=113068733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 113081850 . T . PASS END=113081897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:44:0,96,1440:0,116,255:40,0 chr1 113083456 . T . PASS END=113083476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,214,255:40,0 chr1 113083477 . G . PASS END=113083494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,209,255:40,0 chr1 113084534 . T . PASS END=113084712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:32:0,81,1141:0,82,255:40,0 chr1 113093223 . T . PASS END=113093315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:31:0,93,1164:0,93,255:40,0 chr1 113098490 . T . PASS END=113098640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:31:0,93,1174:0,93,255:40,0 chr1 113119608 . T . PASS END=113119710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:37:0,87,1305:0,111,255:40,0 chr1 113120967 . T . PASS END=113121039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,191,255:40,0 chr1 113124614 . C . PASS END=113124728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,119,1635:0,119,255:40,0 chr1 113124997 . A . PASS END=113125094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:56:0,120,1800:0,142,255:40,0 chr1 113126594 . T . PASS END=113126729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1215:0,92,255:40,0 chr1 113126730 . A . PASS END=113126745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,84,255:26,0 chr1 113126746 . C . PASS END=113126748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,75,255:18,0 chr1 113134147 . T . PASS END=113134225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,183,255:40,0 chr1 113140593 . C . PASS END=113140620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,102,1352:0,102,255:40,0 chr1 113140621 . G . PASS END=113140700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:34:0,81,1099:0,81,255:40,0 chr1 113140701 . A . PASS END=113140708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:31:0,66,990:0,79,255:26,0 chr1 113143416 . C . PASS END=113143425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:49:0,120,1800:0,132,255:40,0 chr1 113143426 . C . PASS END=113143470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:48:0,120,1800:0,132,255:40,0 chr1 113153463 . C . PASS END=113153625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1299:0,81,255:40,0 chr1 113159435 . A . PASS END=113159435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1466:0,60,255:40,0 chr1 113159436 . A . PASS END=113159459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:43:0,113,1521:0,113,255:40,0 chr1 113159460 . G . PASS END=113159517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:62:0,120,1800:0,169,255:40,0 chr1 113160629 . A . PASS END=113160665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:65:0,120,1800:0,191,255:40,0 chr1 113161531 . C . PASS END=113161543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,250:0,24,250:9,0 chr1 113161544 . C . PASS END=113161544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 113161545 . T . PASS END=113161551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 113161552 . G . PASS END=113161552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 113161553 . C . PASS END=113161554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 113161555 . T . PASS END=113161555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 113161556 . C . PASS END=113161571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,485:0,48,255:18,0 chr1 113161572 . G . PASS END=113161572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 113161573 . C . PASS END=113161573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 113161574 . G . PASS END=113161574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 113161575 . T . PASS END=113161581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 113161582 . G . PASS END=113161589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 113161590 . C . PASS END=113161590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 113161591 . C . PASS END=113161599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 113161600 . A . PASS END=113161600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 113161601 . C . PASS END=113161616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,884:0,62,255:25,0 chr1 113161617 . G . PASS END=113161620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113161621 . C . PASS END=113161621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 113161622 . C . PASS END=113161650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 113161651 . A . PASS END=113161651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 113161652 . G . PASS END=113161658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1063:0,84,255:28,0 chr1 113161659 . G . PASS END=113161659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr1 113161660 . T . PASS END=113161673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 113161674 . G . PASS END=113161681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 113161682 . T . PASS END=113161682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 113161683 . G . PASS END=113161688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 113161689 . G . PASS END=113161717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,945:0,62,255:24,0 chr1 113161718 . G . PASS END=113161735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 113162467 . A . PASS END=113162479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:21,0 chr1 113162480 . A . PASS END=113162480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:18,0 chr1 113162481 . T . PASS END=113162505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,886:0,66,255:25,0 chr1 113189832 . G . PASS END=113189895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:69:0,120,1800:0,180,255:40,2 chr1 113192040 . A . PASS END=113192091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:63:0,120,1800:0,176,255:40,0 chr1 113196220 . T . PASS END=113196243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:85:50:0,85,1465:0,85,255:40,0 chr1 113196244 . T . PASS END=113196283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,155,255:40,0 chr1 113197087 . G . PASS END=113197095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:26,0 chr1 113197096 . A . PASS END=113197097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 113197098 . A . PASS END=113197098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 113197099 . G . PASS END=113197099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 113197100 . A . PASS END=113197100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 113197101 . G . PASS END=113197251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:33:0,84,1241:0,98,255:40,0 chr1 113197252 . A . PASS END=113197263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:32:0,75,1125:0,96,255:26,0 chr1 113197264 . A . PASS END=113197264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 113197265 . A . PASS END=113197287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 113197288 . T . PASS END=113197293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,63,255:18,0 chr1 113201644 . G . PASS END=113201644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 113201645 . T . PASS END=113201645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:31,0 chr1 113201646 . T . PASS END=113201669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:32:0,89,1172:0,89,255:39,0 chr1 113201670 . A . PASS END=113201723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:38:0,93,1395:0,93,255:40,0 chr1 113202323 . G . PASS END=113202379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:38:0,98,1360:0,98,255:40,0 chr1 113202380 . G . PASS END=113202401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,92,255:37,0 chr1 113203828 . C . PASS END=113203857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,120,1800:0,131,255:40,0 chr1 113209696 . G . PASS END=113209767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:55:0,120,1800:0,144,255:40,0 chr1 113212165 . A . PASS END=113212227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,133,255:40,0 chr1 113212518 . G . PASS END=113212754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:91:40:0,91,1395:0,91,255:40,0 chr1 113217535 . A . PASS END=113217541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:13,0 chr1 113217542 . G . PASS END=113217542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 113217543 . T . PASS END=113217545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 113217546 . G . PASS END=113217547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 113217548 . T . PASS END=113217548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 113217549 . C . PASS END=113217552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 113217553 . T . PASS END=113217553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:14,0 chr1 113217554 . G . PASS END=113217557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 113217558 . G . PASS END=113217558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr1 113217559 . C . PASS END=113217568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 113217569 . A . PASS END=113217575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:21,0 chr1 113217576 . C . PASS END=113217582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 113217583 . T . PASS END=113217598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 113217599 . T . PASS END=113217650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 113217651 . T . PASS END=113217651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 113217652 . A . PASS END=113217659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 113217660 . C . PASS END=113217660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 113217661 . T . PASS END=113217663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 113217664 . A . PASS END=113217667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:14,0 chr1 113217668 . T . PASS END=113217671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,28,255:9,0 chr1 113231557 . C . PASS END=113231563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 113231564 . A . PASS END=113231564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 113231565 . C . PASS END=113231565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:15,0 chr1 113231566 . C . PASS END=113231581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:18,0 chr1 113231582 . T . PASS END=113231582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 113231583 . C . PASS END=113231590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 113231591 . C . PASS END=113231598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr1 113231599 . A . PASS END=113231600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 113231601 . T . PASS END=113231601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 113231602 . G . PASS END=113231605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 113231606 . A . PASS END=113231607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:46:21:0,46,706:0,46,255:21,0 chr1 113231608 . T . PASS END=113231621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr1 113231622 . A . PASS END=113231632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1172:0,87,255:31,0 chr1 113231633 . A . PASS END=113231633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,964:0,60,255:29,0 chr1 113231634 . C . PASS END=113231634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 113231635 . T . PASS END=113231635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 113231636 . C . PASS END=113231700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1090:0,83,255:34,0 chr1 113231701 . G . PASS END=113231701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:28,0 chr1 113231702 . C . PASS END=113231711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1080:0,80,255:30,0 chr1 113231712 . A . PASS END=113231712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr1 113231713 . T . PASS END=113231715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 113231716 . C . PASS END=113231716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 113231717 . A . PASS END=113231721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 113231722 . A . PASS END=113231722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,842:0,53,255:24,0 chr1 113231723 . C . PASS END=113231758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:26,0 chr1 113231759 . A . PASS END=113231760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 113232037 . G . PASS END=113232039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 113232040 . T . LowGQ END=113232040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:5,0,255:12,0 chr1 113232041 . G . PASS END=113232041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 113232042 . A . PASS END=113232042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:13,0 chr1 113232043 . G . PASS END=113232043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 113232044 . T . PASS END=113232045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:12:15:0,12,410:0,12,255:14,0 chr1 113232046 . T . PASS END=113232046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 113232047 . C . LowGQ END=113232047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,412:2,0,255:13,0 chr1 113232048 . T . PASS END=113232048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 113232049 . T . PASS END=113232049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 113232050 . C . LowGQ END=113232050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,400:5,0,255:12,0 chr1 113232051 . A . PASS END=113232051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:13,0 chr1 113232052 . T . PASS END=113232055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:14,0 chr1 113232056 . A . PASS END=113232056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr1 113232057 . A . PASS END=113232057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 113232058 . A . PASS END=113232060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:15,0 chr1 113232061 . T . PASS END=113232061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:15,0 chr1 113232062 . G . PASS END=113232063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,607:0,40,255:17,0 chr1 113232064 . T . PASS END=113232064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:17,0 chr1 113232065 . G . PASS END=113232065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 113232066 . T . PASS END=113232085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:23,0 chr1 113232086 . C . PASS END=113232086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 113232087 . C . PASS END=113232113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,840:0,65,255:26,0 chr1 113232114 . T . PASS END=113232114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr1 113232115 . T . PASS END=113232115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:25,0 chr1 113232116 . A . PASS END=113232117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113232118 . C . PASS END=113232118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 113232119 . C . PASS END=113232121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 113232122 . C . PASS END=113232122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 113232123 . T . PASS END=113232132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 113232133 . C . PASS END=113232204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:26,0 chr1 113232205 . A . PASS END=113232205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 113232206 . C . PASS END=113232206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 113232207 . T . PASS END=113232207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 113232208 . C . PASS END=113232212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 113232213 . G . PASS END=113232213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 113232214 . G . PASS END=113232216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 113232217 . A . PASS END=113232270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,44,255:19,0 chr1 113232271 . C . PASS END=113232272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 113232462 . G . PASS END=113232471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,635:0,51,255:18,0 chr1 113232472 . T . PASS END=113232472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 113232473 . G . PASS END=113232475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,639:0,57,255:19,0 chr1 113232476 . C . PASS END=113232490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:24,0 chr1 113232491 . A . PASS END=113232491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 113232492 . A . PASS END=113232493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 113232494 . A . PASS END=113232494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,673:0,25,255:21,0 chr1 113232495 . C . PASS END=113232496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:24,0 chr1 113232497 . A . PASS END=113232497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 113232498 . G . PASS END=113232508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 113232509 . T . PASS END=113232509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 113232510 . A . PASS END=113232517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,939:0,62,255:26,0 chr1 113232518 . G . PASS END=113232523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1041:0,81,255:28,0 chr1 113232524 . G . PASS END=113232525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 113232526 . G . PASS END=113232536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1155:0,90,255:30,0 chr1 113232537 . T . PASS END=113232537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 113232538 . G . PASS END=113232550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1141:0,90,255:30,0 chr1 113232551 . G . PASS END=113232681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 113232682 . G . PASS END=113232682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 113232683 . G . PASS END=113232695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 113232696 . T . PASS END=113232720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:19,0 chr1 113234287 . C . PASS END=113234290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 113234291 . A . PASS END=113234291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 113234292 . A . PASS END=113234292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113234293 . G . PASS END=113234364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1102:0,83,255:35,0 chr1 113234365 . C . PASS END=113234365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr1 113234366 . A . PASS END=113234401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1172:0,80,255:33,0 chr1 113234402 . A . PASS END=113234410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 113234411 . G . PASS END=113234411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr1 113234412 . C . PASS END=113234414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 113234415 . A . PASS END=113234415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 113234416 . G . PASS END=113234418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 113234419 . C . PASS END=113234421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 113235383 . G . PASS END=113235388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:26,0 chr1 113235389 . G . PASS END=113235510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1105:0,90,255:40,0 chr1 113235511 . G . PASS END=113235541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,71,255:26,0 chr1 113235542 . C . PASS END=113235551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:18,0 chr1 113236640 . G . PASS END=113236643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr1 113236644 . C . PASS END=113236651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr1 113236652 . A . PASS END=113236656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 113236657 . G . PASS END=113236657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 113236658 . A . PASS END=113236667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,768:0,66,255:25,0 chr1 113236668 . C . PASS END=113236668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 113236669 . A . PASS END=113236677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 113236678 . G . PASS END=113236680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 113236681 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=3.050;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:8,6,0:4,9,0:48:85,0,49,528,429,958:255,0,255:12,0:5.0000e+01,6.9116e-05,5.2275e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,8,7:6,6,13,2 chr1 113236682 . G . PASS END=113236685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 113236686 . A . PASS END=113236686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113236687 . C . PASS END=113236690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113236691 . T . PASS END=113236691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:26,0 chr1 113236692 . T . PASS END=113236718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,956:0,84,255:28,0 chr1 113236719 . A . PASS END=113236728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 113236729 . C . PASS END=113236730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 113236731 . T . PASS END=113236732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 113236733 . A . PASS END=113236733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 113236734 . C . PASS END=113236734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 113236735 . A . PASS END=113236736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:29:0,78,1050:0,79,255:28,0 chr1 113236737 . A . PASS END=113236742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr1 113236743 . G . PASS END=113236766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr1 113236767 . A . PASS END=113236794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 113237075 . C . PASS END=113237076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 113237077 . T . PASS END=113237077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 113237078 . C . PASS END=113237094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,771:0,61,255:26,0 chr1 113237095 . A . PASS END=113237097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 113237098 . G . PASS END=113237098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 113237099 . G . PASS END=113237133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,919:0,81,255:29,0 chr1 113237134 . A . PASS END=113237168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 113237169 . A . PASS END=113237170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 113237171 . A G, 48.41 PASS DP=23;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=2.204;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,9,0:0.409,0.000:22:10,5,0:3,4,0:47:83,0,50,319,455,773:255,0,255:12,0:4.8413e+01,8.4389e-05,5.3000e+01,3.1886e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,3,6:7,6,3,6 chr1 113237172 . G . PASS END=113237178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 113237179 . G . PASS END=113237179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 113237180 . G . PASS END=113237196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:24,0 chr1 113237197 . T . PASS END=113237197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 113237198 . C . PASS END=113237203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 113237204 . T . PASS END=113237204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 113237205 . G . PASS END=113237207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 113237208 . G . PASS END=113237208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 113237209 . C . PASS END=113237209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 113237210 . A . PASS END=113237212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 113237213 . T . PASS END=113237217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 113237218 . A . PASS END=113237220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 113237221 . T . PASS END=113237251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,590:0,48,255:19,0 chr1 113237371 . G . PASS END=113237389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 113237390 . G . PASS END=113237390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 113237391 . A . PASS END=113237493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1109:0,80,255:38,0 chr1 113237494 . C . PASS END=113237499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,83,255:26,0 chr1 113237500 . A . PASS END=113237500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:25,0 chr1 113237501 . G . PASS END=113237518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 113238038 . G . PASS END=113238040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 113238041 . G . PASS END=113238041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:31,0 chr1 113238042 . T . PASS END=113238196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:32:0,83,1148:0,83,255:40,0 chr1 113238770 . C . PASS END=113238862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,133,255:40,0 chr1 113238863 . A . PASS END=113238863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1580:0,58,255:40,0 chr1 113238864 . C . PASS END=113238873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,102,1574:0,102,255:40,0 chr1 113239059 . G . PASS END=113239156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,129,255:40,0 chr1 113239252 . G . PASS END=113239281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:26,0 chr1 113239282 . C . PASS END=113239285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113239286 . A . PASS END=113239308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr1 113239309 . A . PASS END=113239311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 113239312 . C . PASS END=113239312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 113239313 . T . PASS END=113239319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:30,0 chr1 113239320 . C . PASS END=113239328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:25,0 chr1 113239329 . G . PASS END=113239330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 113239331 . G . PASS END=113239331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 113239332 . C . PASS END=113239333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr1 113239334 . G . PASS END=113239335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 113239336 . G . PASS END=113239344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 113239345 . T . PASS END=113239381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1116:0,87,255:38,0 chr1 113239382 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=2.824;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,20,0:0.513,0.000:39:12,10,0:7,10,0:48:85,0,50,715,678,1394:255,0,255:16,0:5.0000e+01,6.5492e-05,5.2947e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,13,7:11,8,13,7 chr1 113239383 . C . PASS END=113239419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:38:0,96,1457:0,96,255:40,0 chr1 113239420 . C . PASS END=113239440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1588:0,113,255:40,0 chr1 113239441 . T . PASS END=113239468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:37:0,84,1309:0,84,255:38,0 chr1 113240616 . G . PASS END=113240622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,840:0,61,255:26,0 chr1 113240623 . C . PASS END=113240628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 113240629 . A . PASS END=113240629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 113240630 . T . PASS END=113240653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:32:0,85,1166:0,85,255:40,0 chr1 113240654 . A . PASS END=113240654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1368:0,68,255:39,0 chr1 113240655 . T . PASS END=113240723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:31:0,85,1305:0,85,255:40,0 chr1 113240724 . A . PASS END=113240724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 113240725 . C . PASS END=113240733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 113240909 . G . PASS END=113240928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,930:0,65,255:26,0 chr1 113240929 . C . PASS END=113240929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 113240930 . G . PASS END=113240930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 113240931 . G . PASS END=113240933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:30,0 chr1 113240934 . T . PASS END=113240935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 113240936 . A . PASS END=113241014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1135:0,80,255:35,0 chr1 113241015 . A . PASS END=113241020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 113241021 . T . PASS END=113241021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1229:0,69,255:34,0 chr1 113241022 . C . PASS END=113241041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1302:0,91,255:36,0 chr1 113241042 . A . PASS END=113241042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 113241043 . G . PASS END=113241048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:30,0 chr1 113241049 . A . PASS END=113241049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,991:0,79,255:26,0 chr1 113241050 . G . PASS END=113241051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:27,0 chr1 113241052 . T C, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=1.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:9,12,0:5,5,0:48:85,0,49,567,464,1031:255,0,255:12,0:5.0000e+01,6.8598e-05,5.2352e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,4,13:5,9,5,12 chr1 113241053 . C . PASS END=113241060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 113241061 . C . PASS END=113241080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:24,0 chr1 113241081 . T . PASS END=113241081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,693:0,39,255:21,0 chr1 113241082 . C . PASS END=113241086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 113241087 . C . PASS END=113241087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 113241088 . G . PASS END=113241089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 113241090 . A . PASS END=113241100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 113241260 . C . PASS END=113241271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:25,0 chr1 113241272 . C . PASS END=113241291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:32,0 chr1 113241292 . T . PASS END=113241292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr1 113241293 . T . PASS END=113241295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:36,0 chr1 113241337 . G . PASS END=113241460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:33:0,89,1263:0,89,255:40,0 chr1 113241461 . G . PASS END=113241461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr1 113241462 . C . PASS END=113241463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 113241464 . C . PASS END=113241465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 113241466 . C . PASS END=113241493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 113241494 . C . PASS END=113241494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:25,0 chr1 113241495 . C . PASS END=113241503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:26,0 chr1 113241504 . T . PASS END=113241514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:24:0,57,855:0,72,255:19,0 chr1 113241515 . C . PASS END=113241520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:22,0 chr1 113241521 . C . PASS END=113241542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr1 113241543 . T . PASS END=113241543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,593:0,21,255:17,0 chr1 113241544 . C . PASS END=113241545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 113241546 . C . PASS END=113241571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,785:0,62,255:26,0 chr1 113241572 . C . PASS END=113241580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 113241581 . G . PASS END=113241581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 113241582 . G . PASS END=113241584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113241585 . C . PASS END=113241593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 113241594 . G . PASS END=113241594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:22,0 chr1 113241595 . A . PASS END=113241619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,939:0,72,255:25,0 chr1 113241620 . A . PASS END=113241620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 113241621 . C . PASS END=113241627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 113241628 . T . PASS END=113241628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 113241629 . G . PASS END=113241629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 113241630 . T . PASS END=113241639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,50,255:19,0 chr1 113242307 . G . PASS END=113242432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1095:0,85,255:40,0 chr1 113242516 . A . PASS END=113242525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,873:0,78,255:26,0 chr1 113242526 . T . PASS END=113242554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,970:0,72,255:26,0 chr1 113242555 . A . PASS END=113242555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 113242556 . T . PASS END=113242557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 113242558 . A . PASS END=113242567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 113242568 . A . PASS END=113242570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113242571 . C . PASS END=113242573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 113242574 . T . PASS END=113242604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:23:0,62,862:0,62,255:26,0 chr1 113242841 . A . PASS END=113242844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:23,0 chr1 113242845 . C . PASS END=113242845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:21,0 chr1 113242846 . T . PASS END=113242866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,917:0,62,255:26,0 chr1 113242867 . G . PASS END=113242962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1008:0,81,255:39,0 chr1 113243038 . G . PASS END=113243045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,651:0,41,255:17,0 chr1 113243046 . A . PASS END=113243046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 113243047 . G . PASS END=113243047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:17,0 chr1 113243048 . C T, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=0.537;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,11,0:0.579,0.000:19:4,5,0:4,6,0:48:85,0,49,377,283,660:255,0,250:7,0:5.0000e+01,7.0928e-05,5.1969e+01,3.7729e+02,3.1785e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,7,4,7:5,3,6,5 chr1 113243049 . C . PASS END=113243050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 113243051 . T . PASS END=113243051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 113243052 . G . PASS END=113243062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr1 113243063 . C . PASS END=113243063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 113243064 . C . PASS END=113243064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 113243065 . A . PASS END=113243070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 113243071 . G . PASS END=113243074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 113243075 . G . PASS END=113243083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 113243084 . G . PASS END=113243084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,743:0,39,255:22,0 chr1 113243085 . G . PASS END=113243085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 113243086 . G . PASS END=113243092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,886:0,72,255:24,0 chr1 113243093 . T . PASS END=113243093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:19,0 chr1 113243094 . C . PASS END=113243117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:23,0 chr1 113243118 . A . PASS END=113243118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:19,0 chr1 113243119 . A . PASS END=113243119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 113243120 . T . PASS END=113243125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 113243126 . C . PASS END=113243129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 113244083 . T . PASS END=113244086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 113244087 . G . PASS END=113244088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 113244089 . G . PASS END=113244097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 113244098 . T . PASS END=113244098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 113244099 . G . PASS END=113244122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 113244123 . T . PASS END=113244123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 113244124 . G . PASS END=113244124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 113244125 . T . PASS END=113244148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,731:0,63,255:25,0 chr1 113244149 . G . PASS END=113244149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 113244150 . G . PASS END=113244153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 113244154 . T . PASS END=113244154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 113244155 . G . PASS END=113244232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,988:0,84,255:31,0 chr1 113244233 . A . PASS END=113244236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,898:0,73,255:26,0 chr1 113244237 . C . PASS END=113244238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 113244239 . C . PASS END=113244239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 113244240 . C . PASS END=113244246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 113244247 . C . PASS END=113244301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr1 113244302 . C . PASS END=113244335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 113245185 . C . PASS END=113245194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1197:0,96,255:35,0 chr1 113245195 . T . PASS END=113245195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr1 113245196 . T . PASS END=113245315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:36:0,81,1323:0,81,255:40,0 chr1 113245621 . C . PASS END=113245719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:40:0,81,1405:0,81,255:40,0 chr1 113245720 . T . PASS END=113245720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1504:0,74,255:35,0 chr1 113245721 . G . PASS END=113245741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:37:0,87,1305:0,101,255:36,0 chr1 113246035 . T . PASS END=113246079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1177:0,80,255:36,0 chr1 113246266 . C . PASS END=113246266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 113246267 . T . PASS END=113246428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,115,1545:0,115,255:40,0 chr1 113247722 . C . PASS END=113247722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 113247723 . T . PASS END=113247723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:10,0 chr1 113247724 . C . PASS END=113247750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr1 113247751 . G . PASS END=113247751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 113247752 . G . PASS END=113247778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 113247779 . A . PASS END=113247787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 113247788 . A . PASS END=113247788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,286:0,13,255:6,0 chr1 113247789 . G . PASS END=113247790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:7,0 chr1 113248227 . C . PASS END=113248239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 113248240 . C . PASS END=113248240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 113248241 . G . PASS END=113248241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 113248242 . C . PASS END=113248261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr1 113252785 . T . PASS END=113252788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 113252789 . G . PASS END=113252793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 113252794 . A . PASS END=113252794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 113252795 . C . PASS END=113252824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:24,0 chr1 113252825 . A . PASS END=113252825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 113252826 . C . PASS END=113252836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,858:0,72,255:25,0 chr1 113252837 . T . PASS END=113252837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 113252838 . C . PASS END=113252846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,976:0,68,255:26,0 chr1 113252847 . C . PASS END=113252870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1027:0,83,255:33,0 chr1 113252871 . A . PASS END=113252871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 113252872 . G . PASS END=113252878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:33,0 chr1 113252879 . T . PASS END=113252879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1107:0,66,255:29,0 chr1 113252880 . C . PASS END=113252898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1127:0,93,255:32,0 chr1 113252899 . C . PASS END=113252899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 113252900 . C . PASS END=113252906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 113252907 . C . PASS END=113252907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 113252908 . C . PASS END=113252913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 113252914 . T . PASS END=113252916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113252917 . G . PASS END=113252921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 113252922 . G . PASS END=113252932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,77,255:24,0 chr1 113253082 . C . PASS END=113253233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:43:0,102,1530:0,116,255:40,2 chr1 113253366 . C . PASS END=113253426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,102,1368:0,103,255:40,0 chr1 113253427 . T . PASS END=113253427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1292:0,68,255:34,0 chr1 113253428 . G . PASS END=113253457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1205:0,88,255:36,0 chr1 113253458 . T . PASS END=113253458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 113253459 . G . PASS END=113253473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 113253630 . C . PASS END=113253693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:35:0,88,1187:0,88,255:40,0 chr1 113253888 . C . PASS END=113254006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:39:0,87,1382:0,87,255:40,0 chr1 113254085 . C . PASS END=113254096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,108,1620:0,123,255:40,0 chr1 113254593 . A . PASS END=113254616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1064:0,87,255:30,0 chr1 113254617 . A . PASS END=113254617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 113254618 . G . PASS END=113254645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1139:0,80,255:33,0 chr1 113254646 . G . PASS END=113254646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 113254647 . A . PASS END=113254677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1199:0,86,255:35,0 chr1 113254967 . C . PASS END=113254970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,864:0,69,255:24,0 chr1 113254971 . T . PASS END=113254971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 113254972 . A . PASS END=113254972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 113254973 . T . PASS END=113254975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,823:0,55,255:24,0 chr1 113254976 . C . PASS END=113254977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 113254978 . T . PASS END=113254978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 113254979 . G . PASS END=113254988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,872:0,75,255:25,0 chr1 113254989 . C . PASS END=113254990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 113254991 . T . PASS END=113254991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 113254992 . A . PASS END=113255008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 113255009 . T . PASS END=113255010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,902:0,70,255:26,0 chr1 113255011 . G . PASS END=113255011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 113255012 . A . PASS END=113255013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 113255014 . C . PASS END=113255014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 113255015 . A . PASS END=113255015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 113255016 . C . PASS END=113255016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113255017 . A . PASS END=113255021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 113255022 . G . PASS END=113255031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:30,0 chr1 113255032 . G . PASS END=113255032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr1 113255033 . C . PASS END=113255034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 113255035 . C . PASS END=113255035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 113255036 . C . PASS END=113255041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 113255042 . A . PASS END=113255042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 113255043 . C . PASS END=113255049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1003:0,87,255:29,0 chr1 113255050 . G . PASS END=113255064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 113255065 . G . PASS END=113255065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:24,0 chr1 113255066 . G . PASS END=113255080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:24,0 chr1 113255081 . T . PASS END=113255081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 113255082 . G . PASS END=113255082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 113255366 . C . PASS END=113255368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 113255369 . G . PASS END=113255371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 113255372 . C . PASS END=113255372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 113255373 . T . PASS END=113255387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,701:0,63,255:23,0 chr1 113255388 . A . PASS END=113255388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 113255389 . C T, 115.76 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,5,0:0,18,0:66:154,69,0,855,69,855:255,69,0:0,0:1.1576e+02,6.5761e+01,1.0354e-06,4.5000e+02,1.0053e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,8:0,0,9,14 chr1 113255390 . G . PASS END=113255407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,868:0,62,255:26,0 chr1 113255408 . C . PASS END=113255409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113255410 . C . PASS END=113255410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 113255411 . G . PASS END=113255420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 113255421 . T . PASS END=113255421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 113255422 . C . PASS END=113255422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 113255423 . C . PASS END=113255426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 113255427 . T . PASS END=113255427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113255428 . G . PASS END=113255430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113255431 . A . PASS END=113255433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 113255434 . A . PASS END=113255434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,886:0,37,255:25,0 chr1 113255435 . C . PASS END=113255437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 113255438 . G . PASS END=113255438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113255439 . C . PASS END=113255484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,869:0,61,255:26,0 chr1 113255485 . T . PASS END=113255486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:22,0 chr1 113255487 . C . PASS END=113255496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 113255497 . T . PASS END=113255497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 113255498 . T . PASS END=113255498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 113255499 . G . PASS END=113255499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 113255500 . G . PASS END=113255504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,852:0,69,255:25,0 chr1 113255505 . C . PASS END=113255505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 113255506 . A . PASS END=113255509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 113255510 . G . PASS END=113255510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 113255511 . G . PASS END=113255512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 113255513 . T . PASS END=113255513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:20,0 chr1 113255514 . G . PASS END=113255518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 113255519 . C . PASS END=113255533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,56,255:19,0 chr1 113255534 . T . PASS END=113255534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:15,0 chr1 113255535 . A . PASS END=113255539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,615:0,40,255:16,0 chr1 113255540 . T . PASS END=113255540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 113255541 . A . PASS END=113255544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:16,0 chr1 113255545 . G . PASS END=113255557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 113255558 . C . PASS END=113255558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 113255559 . T . PASS END=113255559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 113255560 . C . PASS END=113255560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 113255561 . T . PASS END=113255561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 113255562 . C . PASS END=113255566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 113255567 . A . PASS END=113255567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 113255568 . T . PASS END=113255575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 113255576 . C . PASS END=113255577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 113255578 . G . PASS END=113255578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr1 113255579 . G . PASS END=113255586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,495:0,31,255:12,0 chr1 113255587 . A . PASS END=113255587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr1 113255588 . G . PASS END=113255591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,435:0,36,255:12,0 chr1 113255592 . A . PASS END=113255592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 113255593 . T . PASS END=113255595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 113255596 . C . PASS END=113255596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 113255597 . A . PASS END=113255597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 113255598 . G . PASS END=113255598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 113255599 . C . PASS END=113255599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 113255600 . A . PASS END=113255600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 113255601 . G . PASS END=113255601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,365:0,9,255:11,0 chr1 113255602 . C . PASS END=113255602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 113255603 . T . PASS END=113255603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 113255604 . C . PASS END=113255605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 113255606 . G . PASS END=113255606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr1 113255607 . C . PASS END=113255611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 113255612 . T . PASS END=113255612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:12,0 chr1 113255613 . G . PASS END=113255616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 113255617 . G . PASS END=113255617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:12,0 chr1 113255618 . C . PASS END=113255626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr1 113255627 . T . PASS END=113255627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 113255628 . A . PASS END=113255635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,413:0,39,255:13,0 chr1 113255636 . G . PASS END=113255637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,410:0,22,255:10,0 chr1 113255638 . A . PASS END=113255641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 113255642 . G . PASS END=113255652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 113255653 . C . PASS END=113255653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 113256119 . C . PASS END=113256233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,132,255:40,0 chr1 113257256 . C . PASS END=113257282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,515:0,48,255:16,0 chr1 113257283 . C . PASS END=113257284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 113257285 . G . LowGQ END=113257285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,488:7,0,255:11,0 chr1 113257286 . G . PASS END=113257293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 113257294 . C . PASS END=113257298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 113257299 . T . PASS END=113257340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 113257341 . A . PASS END=113257342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:17:11:0,17,363:0,17,255:10,0 chr1 113257343 . C . PASS END=113257349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 113257598 . T . PASS END=113257626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 113257627 . G . PASS END=113257643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,521:0,42,255:15,0 chr1 113257644 . G . PASS END=113257644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 113257645 . G . PASS END=113257662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 113257663 . C . PASS END=113257688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:21,0 chr1 113257689 . C . PASS END=113257689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 113257690 . C . PASS END=113257693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 113257694 . G . PASS END=113257694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 113257695 . G . PASS END=113257698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 113257699 . C . PASS END=113257730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:19,0 chr1 113257731 . C . PASS END=113257731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 113257732 . T . PASS END=113257775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,637:0,40,255:19,0 chr1 113257776 . C . PASS END=113257776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 113257777 . C . PASS END=113257778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 113257779 . T . PASS END=113257780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 113257781 . G . PASS END=113257781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 113257782 . C . PASS END=113257782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 113257783 . G . PASS END=113257785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 113257786 . A . PASS END=113257786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 113257787 . G . PASS END=113257791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 113257792 . C . PASS END=113257793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:14,0 chr1 113257794 . T . PASS END=113257799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 113257800 . C . PASS END=113257800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,582:0,10,255:14,0 chr1 113257801 . T . PASS END=113257802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 113257803 . C . LowGQ END=113257803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,504:37,0,255:15,0 chr1 113257804 . T . PASS END=113257806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,590:0,40,255:18,0 chr1 113257807 . A . LowGQ END=113257807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,526:15,0,255:15,0 chr1 113257808 . G . PASS END=113257808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 113257809 . C . LowGQ END=113257809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,504:29,0,255:16,0 chr1 113257810 . G . PASS END=113257811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 113257812 . C . LowGQ END=113257812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,442:52,0,255:15,0 chr1 113257813 . G . PASS END=113257814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 113257815 . C . LowGQ END=113257815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,441:54,0,255:15,0 chr1 113257816 . G . PASS END=113257818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 113257819 . C . LowGQ END=113257819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,537:21,0,255:17,0 chr1 113257820 . G . PASS END=113257821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 113257822 . C . LowGQ END=113257822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,541:15,0,255:16,0 chr1 113257823 . G . PASS END=113257823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 113257824 . C . PASS END=113257824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,576:0,18,255:18,0 chr1 113257825 . C . LowGQ END=113257825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,520:21,0,255:15,0 chr1 113257826 . G . PASS END=113257826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 113257827 . A . PASS END=113257827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:12,0 chr1 113257828 . G . PASS END=113257829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:14,0 chr1 113257830 . C . LowGQ END=113257830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,457:60,0,255:10,0 chr1 113257831 . G . PASS END=113257832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:15,0 chr1 113257833 . C . LowGQ END=113257833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,427:95,0,255:11,0 chr1 113257834 . G . PASS END=113257834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 113257835 . T . PASS END=113257835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:13,0 chr1 113257836 . T . PASS END=113257836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:14,0 chr1 113257837 . G . PASS END=113257839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 113257840 . C . LowGQ END=113257841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:15:0,0,346:0,0,255:12,0 chr1 113257842 . G . PASS END=113257843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 113257844 . T . PASS END=113257844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr1 113257845 . C . LowGQ END=113257846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,302:27,0,255:12,0 chr1 113257847 . G . PASS END=113257848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 113257849 . G . PASS END=113257849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 113257850 . G . LowGQ END=113257851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,286:0,0,255:12,0 chr1 113257852 . T . PASS END=113257852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,437:0,14,255:12,0 chr1 113257853 . T . LowGQ END=113257854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:5,0,255:11,0 chr1 113257855 . G . PASS END=113257858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 113257859 . C . PASS END=113257859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,365:0,9,255:9,0 chr1 113257860 . G . PASS END=113257860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 113257861 . C . PASS END=113257861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,360:0,22,255:10,0 chr1 113257862 . G . PASS END=113257863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 113257864 . A . LowGQ END=113257864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,292:11,0,255:7,0 chr1 113257865 . G . PASS END=113257865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 113257866 . G . PASS END=113257866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:9,0 chr1 113257867 . C . LowGQ END=113257867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,327:8,0,255:8,0 chr1 113257868 . G . PASS END=113257869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 113257870 . A . LowGQ END=113257871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,294:0,0,255:8,0 chr1 113257872 . C . PASS END=113257872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 113257873 . G . LowGQ END=113257873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,255:14,0,255:8,0 chr1 113257874 . C . PASS END=113257875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 113257876 . C . PASS END=113257884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 113257885 . C . PASS END=113257888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 113257889 . A . PASS END=113257909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr1 113257910 . A . PASS END=113257912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,247:6,0 chr1 113257913 . C . PASS END=113257923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:6:6:0,6,90:0,18,225:3,0 chr1 113264856 . A . PASS END=113264943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:32:0,82,1105:0,82,255:40,0 chr1 113264944 . C . PASS END=113264944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:34,0 chr1 113264945 . T . PASS END=113264962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1310:0,92,255:35,0 chr1 113264963 . T . PASS END=113264963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:32,0 chr1 113264964 . G . PASS END=113264969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1182:0,88,255:32,0 chr1 113264970 . G . PASS END=113264970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 113265638 . T . PASS END=113265640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 113265641 . T . PASS END=113265644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 113265645 . G . PASS END=113265645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 113265646 . C . PASS END=113265652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 113265653 . G . PASS END=113265657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 113265658 . T . PASS END=113265658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 113265659 . G . PASS END=113265765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1111:0,90,255:40,0 chr1 113265766 . G . PASS END=113265785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 113265786 . C . PASS END=113265787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 113266567 . A . PASS END=113266590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 113266591 . C . PASS END=113266701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,889:0,81,255:39,0 chr1 113266702 . G . PASS END=113266711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 113266712 . C . PASS END=113266714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113266715 . T . PASS END=113266744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 113266745 . G . PASS END=113266759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 113269251 . G . PASS END=113269302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1260:0,93,255:38,0 chr1 113454712 . T . PASS END=113454712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 113454859 . T . PASS END=113454859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr1 113455201 . C . PASS END=113455201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr1 113455379 . C . PASS END=113455379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr1 113455427 . TA T,TAA,TAAA, 0.08 DRAGENIndelHardQUAL DP=58;MQ=248.41;MQRankSum=4.968;ReadPosRankSum=-0.142;FractionInformativeReads=0.931;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:33,8,10,3,0:0.148,0.185,0.056,0.000:54:20,3,7,2,0:13,5,3,1,0:17:0,70,120,7,161,57,70,288,284,120,50,230,181,293,221:255,0,255:34,32:7.8125e-02,7.9587e+01,1.3259e+02,1.7489e+01,1.8065e+02,7.0489e+01,7.9974e+01,3.0833e+02,3.0438e+02,1.3297e+02,8.5217e+01,2.7518e+02,2.2612e+02,3.3791e+02,2.5908e+02:0.00,10.00,13.00,10.00,20.00,13.00,10.00,20.00,20.00,13.00,34.77,44.77,44.77,44.77,37.77:12,21,11,10:15,18,18,3 chr1 113455441 . C . PASS END=113455442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,143,255:40,0 chr1 113455449 . C . PASS END=113455449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:99:59:0,120,1800:0,127,255:40,0 chr1 113455462 . C . PASS END=113455462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:99:62:0,120,1800:0,136,255:40,0 chr1 113455469 . A . PASS END=113455469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,159,255:40,0 chr1 113455495 . A . PASS END=113455495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,163,255:40,0 chr1 113455543 . G . PASS END=113455543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:53:0,104,1756:0,104,255:40,2 chr1 113455565 . C . PASS END=113455565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 113455567 . C . PASS END=113455567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,111,1665:0,162,255:37,0 chr1 113455698 . C . PASS END=113455698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 113455774 . A C, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.855;ReadPosRankSum=0.720;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,34,0:0.531,0.000:64:15,17,0:15,17,0:48:85,0,50,1179,1036,2215:255,0,255:27,0:5.0000e+01,6.7045e-05,5.2666e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,20,12,22:15,15,21,13 chr1 113455856 . G . PASS END=113455856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 113455884 . G . PASS END=113455884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,114,1710:0,159,255:38,0 chr1 113455910 . A . PASS END=113455910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 113455997 . G . PASS END=113455997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 113456152 . C . PASS END=113456152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 113456376 . T . PASS END=113456377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 113456409 . G . PASS END=113456409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr1 113456436 . G . PASS END=113456436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr1 113456513 . T . PASS END=113456545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,111,1800:0,111,255:40,0 chr1 113456546 . A T, 50.00 PASS DP=85;MQ=250.00;MQRankSum=7.877;ReadPosRankSum=3.954;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,44,0:0.524,0.000:84:20,23,0:20,21,0:48:85,0,50,1413,1328,2741:255,0,255:36,0:5.0000e+01,6.6010e-05,5.2838e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,13,24,20:21,19,27,17 chr1 113456547 . T . PASS END=113456583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,230,255:40,0 chr1 113456584 . T . PASS END=113456751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:43:0,81,1215:0,102,255:40,0 chr1 113456752 . T . PASS END=113456772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:24:0,60,872:0,61,255:25,0 chr1 113456773 . T . PASS END=113456775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 113456776 . C . PASS END=113456776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 113456777 . A . PASS END=113456777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 113456778 . T . PASS END=113456782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 113456783 . C . PASS END=113456787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,720:0,47,255:18,0 chr1 113459794 . C . PASS END=113459794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 113459800 . C . PASS END=113459815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,568:0,41,255:19,0 chr1 113459816 . C . PASS END=113459827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:26,0 chr1 113459828 . A . PASS END=113459829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 113459830 . A . PASS END=113459830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 113459831 . G . PASS END=113459836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr1 113459837 . C . PASS END=113459837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 113459838 . A . PASS END=113459839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 113459840 . A . PASS END=113459840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 113459841 . A . PASS END=113460328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1225:0,81,255:40,0 chr1 113460329 . A . PASS END=113460329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1252:0,72,255:37,0 chr1 113460330 . A . PASS END=113460622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1215:0,87,255:40,0 chr1 113460623 . A . PASS END=113460624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 113460625 . T . PASS END=113460626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 113460627 . A . PASS END=113460629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 113460630 . G . PASS END=113460634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:25,0 chr1 113460635 . A . PASS END=113460655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,49,255:19,0 chr1 113460656 . A . PASS END=113460659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:30:22:0,30,450:0,66,255:13,0 chr1 113460660 . C . PASS END=113460666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:21:23:0,21,315:0,69,255:9,0 chr1 113460676 . CAATAAATA CAATA,C, 147.69 PASS DP=19;MQ=249.69;FractionInformativeReads=0.895 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,10,7,0:0.588,0.412,0.000:17:0,5,7,0:0,5,0,0:49:152,100,51,132,0,52,205,84,130,189:255,0,253:0,15:1.4769e+02,9.7687e+01,5.1525e+01,1.2954e+02,5.2290e-05,5.3000e+01,2.3570e+02,1.1716e+02,1.6306e+02,2.2319e+02:0.00,2.00,5.00,2.00,4.00,5.00,34.77,36.77,36.77,37.77:0,0,3,14:0,0,8,9 chr1 113464612 . C . PASS END=113464612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113464613 . T . PASS END=113464613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 113464614 . C . PASS END=113464617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 113464618 . T . PASS END=113464618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 113464619 . G . PASS END=113464728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,948:0,84,255:40,0 chr1 113464729 . T . PASS END=113464755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr1 113471714 . C . PASS END=113471714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 113471715 . T . PASS END=113471715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 113471716 . C . PASS END=113471734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:35:0,92,1451:0,92,255:40,0 chr1 113471735 . A . PASS END=113471735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1308:0,73,255:40,0 chr1 113471736 . C . PASS END=113471846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:35:0,90,1228:0,94,255:40,0 chr1 113471847 . A . PASS END=113471847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:30,0 chr1 113471848 . A . PASS END=113471859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:32,0 chr1 113471860 . A . PASS END=113471873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:30:0,69,1035:0,86,255:26,0 chr1 113471874 . G . PASS END=113471876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 113471877 . C . PASS END=113471887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,64,255:26,0 chr1 113471888 . C . PASS END=113471930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,651:0,51,255:19,0 chr1 113498699 . G . PASS END=113498699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 113498704 . C . PASS END=113498704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 113498775 . A . PASS END=113498775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 113498813 . A . PASS END=113498813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 113498814 . C . PASS END=113498814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 113498816 . T . PASS END=113498816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 113498826 . G . PASS END=113498826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 113498830 . C . PASS END=113498830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 113498838 . C . PASS END=113498838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 113498860 . C . PASS END=113498861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 113498925 . A . PASS END=113498925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr1 113498926 . T . PASS END=113498926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 113498928 . C . PASS END=113498928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 113498929 . G . PASS END=113498929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 113498936 . A . PASS END=113498936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 113498961 . C . PASS END=113498961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 113498972 . C . PASS END=113498972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 113499002 . C . PASS END=113499002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 113616029 . A . PASS END=113616038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 113616039 . C . PASS END=113616039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:17,0 chr1 113616040 . G . PASS END=113616040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,613:0,43,255:18,0 chr1 113616041 . C . PASS END=113616050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 113616051 . T . PASS END=113616051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 113616052 . C . PASS END=113616065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:24,0 chr1 113616066 . T . PASS END=113616066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 113616067 . G . PASS END=113616121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr1 113616122 . C . PASS END=113616122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113616123 . T . PASS END=113616123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 113616124 . C . PASS END=113616136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 113616137 . G . PASS END=113616153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:26,0 chr1 113616154 . C . PASS END=113616154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:21,0 chr1 113616155 . T . PASS END=113616163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:22,0 chr1 113616164 . C . PASS END=113616167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 113616168 . G . PASS END=113616185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,854:0,61,255:25,0 chr1 113616186 . T . PASS END=113616186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:23,0 chr1 113616187 . C . PASS END=113616198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,850:0,75,255:25,0 chr1 113616199 . T . PASS END=113616199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 113616200 . C . PASS END=113616200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 113616201 . G . PASS END=113616201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr1 113616202 . C . PASS END=113616209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,892:0,61,255:25,0 chr1 113616210 . T . PASS END=113616210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:21,0 chr1 113616211 . G . PASS END=113616214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:22,0 chr1 113616215 . G . PASS END=113616215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:21,0 chr1 113616216 . C . PASS END=113616216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 113616217 . A . PASS END=113616217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 113616218 . C . PASS END=113616224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 113616225 . G . PASS END=113616225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 113616226 . G . PASS END=113616228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 113616229 . G . PASS END=113616229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:21,0 chr1 113616230 . G . PASS END=113616233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 113616234 . T . PASS END=113616234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 113616235 . G . PASS END=113616237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 113616238 . G . PASS END=113616240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 113616241 . C . PASS END=113616242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 113616243 . T . PASS END=113616243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 113616244 . G . PASS END=113616254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 113616255 . A . PASS END=113616263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,46,255:19,0 chr1 113616264 . T . PASS END=113616264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:14,0 chr1 113616265 . C . PASS END=113616267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:15,0 chr1 113633940 . G . PASS END=113634005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:59:0,120,1800:0,167,255:40,0 chr1 113635828 . G . PASS END=113635902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,120,1800:0,161,255:40,0 chr1 113636052 . A . PASS END=113636147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:33:0,87,1350:0,87,255:40,0 chr1 113636148 . C . PASS END=113636174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:44:0,97,1598:0,97,255:40,0 chr1 113636175 . G . PASS END=113636175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1444:0,77,255:33,0 chr1 113636176 . C . PASS END=113636178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1395:0,94,255:32,0 chr1 113636179 . A . PASS END=113636179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1551:0,77,255:29,0 chr1 113636180 . A . PASS END=113636184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:38:0,81,1215:0,93,255:30,0 chr1 113636185 . C G, 50.00 PASS DP=37;MQ=250.00;MQRankSum=4.960;ReadPosRankSum=0.551;FractionInformativeReads=0.919;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,17,0:0.500,0.000:34:8,11,0:9,6,0:48:85,0,50,608,563,1170:255,0,255:12,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,9,8:10,7,7,10 chr1 113636186 . T . PASS END=113636186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 113636961 . G . PASS END=113636961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 113636962 . A . PASS END=113637104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:95:38:0,95,1354:0,95,255:40,0 chr1 113637234 . G . PASS END=113637377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,108,1566:0,108,255:40,0 chr1 113638494 . A . PASS END=113638494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 113638496 . A . PASS END=113638639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:29:0,86,1116:0,86,255:40,0 chr1 113638844 . T . PASS END=113638987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,102,1530:0,116,255:40,0 chr1 113641327 . A . PASS END=113641407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,120,1800:0,151,255:40,0 chr1 113642833 . A . PASS END=113642904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:90:0,120,1800:0,255,255:40,0 chr1 113643042 . A . PASS END=113643110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:89:0,120,1800:0,208,255:40,0 chr1 113650216 . G . PASS END=113650217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 113650218 . T . PASS END=113650218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:29,0 chr1 113650219 . T . PASS END=113650220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 113650221 . T . PASS END=113650221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 113650222 . G . PASS END=113650235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1081:0,89,255:36,0 chr1 113650236 . T . PASS END=113650236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:34,0 chr1 113650237 . G . PASS END=113650326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,83,255:40,0 chr1 113650327 . A . PASS END=113650352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,68,255:26,0 chr1 113650353 . A . PASS END=113650353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 113650354 . T . PASS END=113650354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 113650355 . G . PASS END=113650377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 113650378 . T . PASS END=113650378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 113650379 . G . PASS END=113650379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 113652864 . A . PASS END=113652864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,607:0,21,255:18,0 chr1 113652865 . T . PASS END=113652875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,615:0,54,255:19,0 chr1 113652876 . A . PASS END=113652877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 113652878 . C . PASS END=113652878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 113652879 . C . PASS END=113652892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,65,255:26,0 chr1 113652893 . C . PASS END=113652918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1133:0,82,255:34,0 chr1 113652919 . A . PASS END=113652919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1111:0,36,255:32,0 chr1 113652920 . G . PASS END=113653184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:80:36:0,80,1320:0,80,255:40,0 chr1 113655098 . C . PASS END=113655098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 113655101 . A . PASS END=113655101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113655102 . G . PASS END=113655110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 113655111 . T . PASS END=113655121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 113655122 . C . PASS END=113655214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,987:0,80,255:35,0 chr1 113655215 . A . PASS END=113655215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:27,0 chr1 113655216 . T . PASS END=113655221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 113655222 . T . PASS END=113655222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 113655223 . A . PASS END=113655228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 113655229 . T . PASS END=113655229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 113655230 . T . PASS END=113655244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 113655245 . A . PASS END=113655245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 113655246 . A . PASS END=113655271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,89,255:33,0 chr1 113655272 . A . PASS END=113655272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:31,0 chr1 113655273 . T . PASS END=113655284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1280:0,102,255:34,0 chr1 113655285 . T . PASS END=113655285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1242:0,77,255:33,0 chr1 113655286 . A . PASS END=113655292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1302:0,89,255:34,0 chr1 113655293 . A . PASS END=113655293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1001:0,52,255:29,0 chr1 113655294 . T . PASS END=113655304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:33:0,88,1099:0,88,255:33,0 chr1 113655305 . A . PASS END=113655305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:31,0 chr1 113655306 . A . PASS END=113655370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1037:0,83,255:38,0 chr1 113655371 . T . PASS END=113655371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:28,0 chr1 113655372 . A . PASS END=113655376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 113655377 . T . PASS END=113655382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:25,0 chr1 113657049 . A . PASS END=113657049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 113657050 . G . PASS END=113657051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,660:0,39,255:22,0 chr1 113657052 . C . PASS END=113657053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:11:24:0,11,723:0,11,255:22,0 chr1 113657054 . C . PASS END=113657054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,868:0,39,255:25,0 chr1 113657055 . C . PASS END=113657056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:25,0 chr1 113657057 . T . PASS END=113657057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,782:0,28,255:23,0 chr1 113657058 . C . PASS END=113657058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,856:0,61,255:24,0 chr1 113657059 . A . PASS END=113657060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,791:0,23,255:23,0 chr1 113657061 . T . PASS END=113657065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,864:0,61,255:24,0 chr1 113657066 . A . PASS END=113657067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,787:0,48,255:23,0 chr1 113657068 . A . PASS END=113657072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,903:0,67,255:25,0 chr1 113657073 . T . PASS END=113657073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,868:0,48,255:25,0 chr1 113657074 . G . PASS END=113657075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:25,0 chr1 113657076 . A . PASS END=113657076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 113657077 . G . PASS END=113657081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:25,0 chr1 113657082 . A . PASS END=113657084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113657085 . C . PASS END=113657085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 113657086 . A . PASS END=113657087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 113657088 . T . PASS END=113657088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 113657089 . A . PASS END=113657091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 113657092 . A C, 44.97 PASS DP=28;MQ=250.00;MQRankSum=4.291;ReadPosRankSum=1.606;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,10,0:0.357,0.000:28:7,5,0:11,5,0:44:80,0,50,358,644,1001:255,0,255:18,0:4.4968e+01,1.5998e-04,5.3000e+01,3.5767e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,7,3:8,10,6,4 chr1 113657093 . C . PASS END=113657129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1210:0,87,255:38,0 chr1 113657130 . G . PASS END=113657498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:39:0,86,1395:0,86,255:40,0 chr1 113658909 . A . PASS END=113658911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 113658912 . A . PASS END=113658912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 113658913 . G . PASS END=113658930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,963:0,67,255:26,0 chr1 113658931 . C . PASS END=113658933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 113658934 . T . PASS END=113658934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 113658935 . C . PASS END=113658941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 113658942 . A . PASS END=113658942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 113658943 . C . PASS END=113658952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr1 113658953 . C . PASS END=113658953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 113658954 . A . PASS END=113658958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:29,0 chr1 113658959 . A . PASS END=113658959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 113658960 . C . PASS END=113658965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 113658966 . C . PASS END=113658979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1047:0,71,255:26,0 chr1 113658980 . G . PASS END=113658980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:23,0 chr1 113658981 . G . PASS END=113658987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,961:0,65,255:24,0 chr1 113658988 . C . PASS END=113658988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 113658989 . A . PASS END=113658991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 113658992 . T . PASS END=113658992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,868:0,44,255:21,0 chr1 113658993 . C . PASS END=113659007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 113659008 . A . PASS END=113659014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 113659015 . A . PASS END=113659015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr1 113659016 . C . PASS END=113659038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,666:0,44,255:19,0 chr1 113659039 . T . PASS END=113659039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:18,0 chr1 113659040 . A . PASS END=113659047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 113659048 . A . PASS END=113659058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,495:0,31,255:13,0 chr1 113661855 . G . PASS END=113661858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 113661859 . C . PASS END=113661860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 113661861 . C . PASS END=113661874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:31,0 chr1 113661875 . A . PASS END=113661875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 113661876 . T . PASS END=113661876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr1 113661877 . T . PASS END=113661877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 113661878 . T . PASS END=113661899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:31:0,89,1119:0,89,255:34,0 chr1 113661900 . C . PASS END=113661900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 113661901 . C . PASS END=113662122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1180:0,85,255:40,0 chr1 113662123 . T . PASS END=113662124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,85,255:26,0 chr1 113662125 . C . PASS END=113662125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:24,0 chr1 113662126 . C . PASS END=113662132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:32:0,66,990:0,80,255:24,0 chr1 113662133 . C . PASS END=113662142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:24:0,42,630:0,64,255:19,0 chr1 113662143 . G . PASS END=113662145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 113666497 . A . PASS END=113666499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:22,0 chr1 113666500 . C . PASS END=113666500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 113666501 . A . PASS END=113666503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,853:0,66,255:24,0 chr1 113666504 . G . PASS END=113666507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 113666508 . C . PASS END=113666508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:25,0 chr1 113666509 . G . PASS END=113666683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1147:0,80,255:40,0 chr1 113666684 . T . PASS END=113666709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 113666710 . G . PASS END=113666723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 113933656 . A . PASS END=113933657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 113933658 . G . PASS END=113933677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,325:0,30,255:10,0 chr1 113933678 . A . PASS END=113933678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 113933679 . G . PASS END=113933680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 113933681 . A . PASS END=113933681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 113933682 . G . PASS END=113933693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 113933694 . C . LowGQ END=113933695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:0,0,255:11,0 chr1 113933696 . A . PASS END=113933697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 113933698 . G . PASS END=113933706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:18,0 chr1 113933707 . T . PASS END=113933707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 113933708 . G . PASS END=113933714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 113933715 . G . PASS END=113933720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 113933721 . G . PASS END=113933721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 113933722 . G . PASS END=113933724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 113933725 . G . PASS END=113933725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 113933726 . G . PASS END=113933733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 113933734 . G . PASS END=113933734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 113933735 . G . PASS END=113933747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 113933748 . G . PASS END=113933748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 113933749 . G . PASS END=113933754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,724:0,63,255:22,0 chr1 113933755 . C . PASS END=113933756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 113933757 . C . PASS END=113933764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 113933765 . C . PASS END=113933765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 113933766 . G . PASS END=113933792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,853:0,66,255:25,0 chr1 113933793 . G . PASS END=113933793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr1 113933794 . C . PASS END=113933795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 113933796 . G . PASS END=113933796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr1 113933797 . C . PASS END=113933797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 113933798 . T . PASS END=113933798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,851:0,23,255:21,0 chr1 113933799 . C . PASS END=113933803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 113933804 . A . PASS END=113933804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 113933805 . G . PASS END=113933812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 113933813 . G . PASS END=113933815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 113933816 . G . PASS END=113933819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 113933820 . C . PASS END=113933820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 113933821 . A . PASS END=113933821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 113933822 . C . PASS END=113933823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 113933824 . T . PASS END=113933824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 113933825 . G . PASS END=113933826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 113933827 . T . PASS END=113933894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,679:0,62,255:26,0 chr1 113933895 . C . PASS END=113933895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr1 113933896 . G . PASS END=113933905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 113933906 . A . PASS END=113933913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:16:0,36,540:0,48,255:13,0 chr1 113933914 . A . PASS END=113933914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 113933915 . C . PASS END=113933916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 113933917 . C . PASS END=113933917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 113933918 . T . PASS END=113933925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 113933926 . A . PASS END=113933941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,327:0,27,255:9,0 chr1 113933942 . A . PASS END=113933946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 113933947 . A . PASS END=113933947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 113933948 . T . PASS END=113933948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 113933949 . C . PASS END=113933958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 113933959 . A . PASS END=113933960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:6,0 chr1 113933961 . T . PASS END=113933966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 113933967 . A . PASS END=113933967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 113933968 . C . PASS END=113933968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 113933969 . C . PASS END=113933969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 113933970 . A . PASS END=113933971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 114092137 . G . PASS END=114092162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:36:0,81,1246:0,81,255:40,0 chr1 114092163 . C . PASS END=114092253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:40:0,89,1454:0,89,255:40,0 chr1 114123164 . G . PASS END=114123283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:40:0,96,1440:0,107,255:40,0 chr1 114128009 . G . PASS END=114128086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:46:0,120,1800:0,138,255:40,0 chr1 114128087 . A . PASS END=114128123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,153,255:40,0 chr1 114128124 . G A, 50.00 PASS DP=61;MQ=250.00;MQRankSum=6.694;ReadPosRankSum=4.701;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,32,0:0.525,0.000:61:12,11,0:17,21,0:48:85,0,50,1100,972,2071:255,0,255:27,0:5.0000e+01,6.6527e-05,5.2763e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,23,13,19:15,14,12,20 chr1 114128125 . A . PASS END=114128161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,125,255:40,0 chr1 114128162 . T . PASS END=114128207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1260:0,91,255:40,0 chr1 114128208 . T . PASS END=114128208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 114128209 . G . PASS END=114128210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 114128211 . A . PASS END=114128218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,1091:0,60,255:26,0 chr1 114133106 . A . PASS END=114133106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 114133107 . A . PASS END=114133114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:33,0 chr1 114133115 . A . PASS END=114133115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:5:36:0,5,993:0,5,255:31,0 chr1 114133116 . G . PASS END=114133166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:89:40:0,89,1277:0,89,255:40,0 chr1 114133167 . A . PASS END=114133204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,138,255:40,0 chr1 114133205 . G . PASS END=114133205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,8:67:46:67:0,46,1935:0,46,255:40,0 chr1 114133206 . A . PASS END=114133206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:69:0,120,1800:0,174,255:40,0 chr1 114133207 . G . PASS END=114133207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,9:67:37:67:0,37,1769:0,37,255:40,0 chr1 114133208 . A . PASS END=114133208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 114133209 . T . PASS END=114133209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,11:66:15:66:0,15,1710:0,15,255:40,0 chr1 114133210 . G . LowGQ END=114133210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,11:66:0:66:0,0,1422:58,0,255:40,0 chr1 114133211 . A . PASS END=114133211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr1 114133212 . G . LowGQ END=114133212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,15:66:0:66:0,0,1307:94,0,255:40,0 chr1 114133213 . A . PASS END=114133214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,198,255:40,0 chr1 114133215 . T . LowGQ END=114133215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,19:65:0:65:0,0,1201:157,0,255:40,0 chr1 114133216 . C . PASS END=114133218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:95:65:0,95,1800:0,95,255:40,0 chr1 114133219 . G . PASS END=114133219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,8:65:62:65:0,62,1809:0,62,255:40,0 chr1 114133220 . A . PASS END=114133257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,111,1665:0,139,255:40,0 chr1 114133258 . A . PASS END=114133268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:37:0,84,1260:0,94,255:36,0 chr1 114133269 . C . PASS END=114133280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:62:26:0,62,945:0,62,255:26,0 chr1 114137103 . C . PASS END=114137182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,120,1800:0,171,255:40,1 chr1 114157223 . A . PASS END=114157277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:40:0,90,1350:0,109,255:40,0 chr1 114157278 . T . PASS END=114157278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:30,0 chr1 114157279 . G . PASS END=114157280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 114162358 . T . PASS END=114162452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:82:43:0,82,1526:0,82,255:40,0 chr1 114165428 . A . PASS END=114165616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:83:35:0,83,1343:0,83,255:40,2 chr1 114184533 . G . PASS END=114184533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 114184534 . C . PASS END=114184536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:28,0 chr1 114184537 . T . PASS END=114185126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:80:30:0,80,1064:0,80,255:40,0 chr1 114185127 . T . PASS END=114185138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:27:0,65,961:0,65,255:26,0 chr1 114186365 . G . PASS END=114186396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,113,1800:0,113,255:40,0 chr1 114189108 . A . PASS END=114189131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1111:0,80,255:38,0 chr1 114189132 . G . PASS END=114189258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1043:0,80,255:40,0 chr1 114189259 . A . PASS END=114189264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,79,255:26,0 chr1 114191859 . C . PASS END=114191950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,105,1575:0,125,255:40,0 chr1 114193636 . A . PASS END=114193636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 114193637 . T . PASS END=114193810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:30:0,83,1180:0,83,255:40,0 chr1 114193811 . G . PASS END=114193811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1235:0,78,255:34,0 chr1 114193812 . G . PASS END=114193827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,94,255:36,0 chr1 114193828 . G . PASS END=114193828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 114196452 . A . PASS END=114196459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:18,0 chr1 114196460 . C . PASS END=114196487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,814:0,63,255:26,0 chr1 114196488 . T . PASS END=114196492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 114196493 . A . PASS END=114196493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,889:0,70,255:28,0 chr1 114196494 . C . PASS END=114196581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1080:0,83,255:36,0 chr1 114196582 . A . PASS END=114196582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1131:0,55,255:29,0 chr1 114196583 . G . PASS END=114196611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:32,0 chr1 114196612 . C . PASS END=114196617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 114196618 . C . PASS END=114196618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,2 chr1 114196619 . A . PASS END=114196619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,986:0,21,255:26,2 chr1 114196620 . A . PASS END=114196620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:27,0 chr1 114196621 . A . PASS END=114196626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:28,0 chr1 114196627 . A . PASS END=114196640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,790:0,67,255:27,0 chr1 114201702 . T . PASS END=114201887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:82:33:0,82,1044:0,82,255:40,1 chr1 114214356 . A . PASS END=114214384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1295:0,92,255:37,0 chr1 114214385 . T . PASS END=114214385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:35,0 chr1 114214386 . C . PASS END=114214458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:36:0,93,1418:0,93,255:40,0 chr1 114215237 . A . PASS END=114215240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr1 114215241 . G . PASS END=114215247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 114215248 . A . PASS END=114215248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 114215249 . A . PASS END=114215251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 114215252 . T . PASS END=114215252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 114215253 . G . PASS END=114215256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114215257 . T . PASS END=114215258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 114215259 . G . PASS END=114215260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 114215261 . A . PASS END=114215261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 114215262 . A . PASS END=114215265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 114215266 . A . PASS END=114215266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,985:0,73,255:27,0 chr1 114215267 . T . PASS END=114215268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 114215269 . T . PASS END=114215269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1099:0,77,255:29,0 chr1 114215270 . C . PASS END=114215276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:32,0 chr1 114215277 . T . PASS END=114215277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 114215278 . C . PASS END=114215330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:33:0,80,1304:0,80,255:39,0 chr1 114215331 . G . PASS END=114215331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:34,0 chr1 114215332 . T . PASS END=114215351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1311:0,95,255:37,0 chr1 114215352 . C . PASS END=114215352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:33,0 chr1 114215353 . G . PASS END=114215363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:34:0,96,1440:0,102,255:34,0 chr1 114215944 . A . PASS END=114215949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:11,0 chr1 114215950 . G . PASS END=114215950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 114215951 . G . PASS END=114215952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,380:0,33,255:11,0 chr1 114215953 . T . PASS END=114215953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 114215954 . G . PASS END=114215962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 114215963 . T . PASS END=114215963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 114215964 . A . PASS END=114215968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:12,0 chr1 114215969 . T . PASS END=114215969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 114215970 . G . PASS END=114215972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 114215973 . G . PASS END=114215973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 114215974 . A . PASS END=114215976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 114215977 . G . PASS END=114215983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 114215984 . G . PASS END=114215984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 114215985 . G . PASS END=114216015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:19,0 chr1 114216016 . G . PASS END=114216018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 114216019 . T . PASS END=114216031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 114216032 . T . PASS END=114216032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 114216033 . G . PASS END=114216034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 114216035 . T . PASS END=114216035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 114216036 . C . PASS END=114216045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 114216046 . C . PASS END=114216046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 114216047 . T . PASS END=114216053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 114216054 . A . PASS END=114216054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:14,0 chr1 114216055 . G . PASS END=114216063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:14,0 chr1 114216064 . G . PASS END=114216085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,435:0,39,255:13,0 chr1 114216086 . A . PASS END=114216086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:12,0 chr1 114216087 . T . PASS END=114216087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 114223820 . G . PASS END=114223947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:42:0,105,1575:0,106,255:40,0 chr1 114223948 . A . PASS END=114223948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1416:0,77,255:32,0 chr1 114223949 . C . PASS END=114223954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1260:0,101,255:34,0 chr1 114223955 . C . PASS END=114223958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1080:0,88,255:26,0 chr1 114224806 . T . PASS END=114224828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,142,255:40,0 chr1 114224829 . T . PASS END=114224915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,162,255:40,0 chr1 114225519 . G . PASS END=114225523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 114225524 . T . PASS END=114225525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,828:0,53,255:19,0 chr1 114225526 . G . PASS END=114225531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 114225532 . T . PASS END=114225532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 114225533 . A . PASS END=114225533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 114225534 . A . PASS END=114225540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 114225541 . T . PASS END=114225541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 114225542 . T . PASS END=114225545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 114225546 . C . PASS END=114225546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 114225547 . T . PASS END=114225550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 114225551 . A . PASS END=114225551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 114225552 . A . PASS END=114226082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:30:0,86,1133:0,86,255:40,0 chr1 114226083 . G . LowGQ END=114226083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,10:55:0:55:0,0,1244:2,0,255:40,0 chr1 114226084 . C . PASS END=114226115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,138,255:40,0 chr1 114226116 . T . PASS END=114226152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,108,1620:0,130,255:40,0 chr1 114226153 . C T, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=2.935;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,26,0:0.531,0.000:49:11,12,0:12,14,0:48:85,0,50,921,785,1706:255,0,255:16,0:5.0000e+01,6.7045e-05,5.2633e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,17,9:15,8,15,11 chr1 114226154 . A . PASS END=114226190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,114,1600:0,114,255:40,0 chr1 114226191 . C . PASS END=114226602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:34:0,94,1305:0,94,255:40,0 chr1 114226603 . A . PASS END=114226603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 114226604 . G . PASS END=114226605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 114226606 . C . PASS END=114226616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:31:0,60,900:0,83,255:25,0 chr1 114226617 . T . PASS END=114226636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 114240327 . T . PASS END=114240347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,152,255:40,0 chr1 114240884 . T . PASS END=114241009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,111,1665:0,113,255:40,0 chr1 114242326 . T . PASS END=114242421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:65:0,120,1800:0,144,255:40,2 chr1 114243416 . C . PASS END=114243571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:81:43:0,81,1215:0,128,255:40,0 chr1 114246679 . T . PASS END=114246789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:35:0,96,1288:0,98,255:40,0 chr1 114247288 . C . PASS END=114247419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:59:0,120,1800:0,161,255:40,0 chr1 114248455 . T . PASS END=114248784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:81:34:0,81,1215:0,88,255:40,2 chr1 114249216 . C . PASS END=114249344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:38:0,102,1374:0,102,255:40,0 chr1 114252876 . C . PASS END=114252876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 114252877 . T . PASS END=114252894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,756:0,66,255:24,0 chr1 114252895 . T . PASS END=114252895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 114252896 . T . PASS END=114252904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:24:0,68,870:0,68,255:26,0 chr1 114252905 . G . PASS END=114252906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114252907 . T . PASS END=114252907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,953:0,37,255:25,0 chr1 114252908 . T . PASS END=114253059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:28:0,80,1156:0,80,255:40,0 chr1 114253060 . A . PASS END=114253060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 114253061 . G . PASS END=114253069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 114253070 . A . PASS END=114253077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:26,0 chr1 114253078 . C . PASS END=114253081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:26:0,57,855:0,78,255:19,0 chr1 114253082 . C . PASS END=114253082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 114253083 . A . PASS END=114253095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,60,255:19,0 chr1 114253096 . C . PASS END=114253096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 114253097 . C . PASS END=114253097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 114254368 . C . PASS END=114254457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:36:0,96,1341:0,96,255:40,0 chr1 114254562 . C . PASS END=114254599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:91:38:0,91,1295:0,91,255:40,0 chr1 114254600 . T . PASS END=114254636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,127,255:40,0 chr1 114254637 . C T, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.378;ReadPosRankSum=1.780;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,31,0:0.554,0.000:56:11,12,0:14,19,0:48:85,0,49,1107,894,2000:255,0,255:22,0:5.0000e+01,7.0928e-05,5.1999e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,15,12,19:14,11,13,18 chr1 114254638 . A . PASS END=114254674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,117,1755:0,119,255:40,0 chr1 114254675 . C . PASS END=114254703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:36:0,81,1215:0,103,255:40,0 chr1 114254704 . G . PASS END=114254705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:33:0,69,1035:0,99,255:23,0 chr1 114254706 . C . PASS END=114254708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 114254709 . C . PASS END=114254711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,74,255:21,0 chr1 114254712 . A . PASS END=114254712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:21,0 chr1 114254713 . T . PASS END=114254720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:21,0 chr1 114254721 . A . PASS END=114254735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,685:0,49,255:20,0 chr1 114255901 . C . PASS END=114256060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:35:0,84,1260:0,92,255:40,0 chr1 114267381 . C . PASS END=114267384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,119,1645:0,119,255:40,0 chr1 114267385 . T . PASS END=114267515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:38:0,80,1108:0,80,255:40,0 chr1 114269040 . C . PASS END=114269196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:38:0,84,1319:0,84,255:40,0 chr1 114280732 . C . PASS END=114280890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:41:0,106,1437:0,106,255:40,0 chr1 114281352 . C . PASS END=114281421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:54:0,120,1800:0,132,255:40,0 chr1 114300321 . C . PASS END=114300377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,128,255:40,0 chr1 114301281 . C . PASS END=114301325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:64:0,120,1800:0,168,255:40,0 chr1 114308602 . T . PASS END=114308602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 114308603 . C . PASS END=114309063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:31:0,90,1178:0,93,255:40,0 chr1 114309064 . C . PASS END=114309075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:69:36:0,69,1035:0,106,255:24,0 chr1 114309721 . C . PASS END=114309829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,2:77:99:60:0,120,1800:0,159,255:40,0 chr1 114310844 . C . PASS END=114310974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1205:0,94,255:40,0 chr1 114310975 . A . PASS END=114311006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,845:0,65,255:26,0 chr1 114311007 . T . PASS END=114311011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:17,0 chr1 114319832 . C . PASS END=114319833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,964:0,70,255:29,0 chr1 114319834 . T . PASS END=114319836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 114319837 . T . PASS END=114319837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr1 114319838 . C . PASS END=114319838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 114319839 . T . PASS END=114319840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1050:0,77,255:29,0 chr1 114319841 . T . PASS END=114319971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1135:0,82,255:40,0 chr1 114319972 . C . PASS END=114319973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 114319974 . T . PASS END=114319974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,954:0,57,255:22,0 chr1 114320293 . T . PASS END=114320430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:37:0,95,1303:0,95,255:40,0 chr1 114338923 . C . PASS END=114338925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,102,1530:0,113,255:34,0 chr1 114339985 . C . PASS END=114339999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,119,1637:0,119,255:40,0 chr1 114340000 . T . PASS END=114340658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,103,1266:0,103,255:40,0 chr1 114354332 . C . PASS END=114354333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,729:0,57,255:19,0 chr1 114354334 . C . PASS END=114354339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 114354340 . G . PASS END=114354342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 114354343 . G . PASS END=114354346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 114354347 . T . PASS END=114354347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 114354348 . G . PASS END=114354351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 114354352 . A . PASS END=114354352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr1 114354353 . G . PASS END=114354381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,830:0,61,255:26,0 chr1 114354382 . T . PASS END=114354382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 114354383 . C . PASS END=114354394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 114354395 . T . PASS END=114354395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 114354396 . G . PASS END=114354396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 114354397 . T . PASS END=114354397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 114354398 . G . PASS END=114354451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,807:0,66,255:25,0 chr1 114354452 . G . PASS END=114354492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr1 114354493 . G . PASS END=114354507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 114354508 . A . PASS END=114354508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 114354509 . G . PASS END=114354523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 114354524 . A . PASS END=114354526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 114354527 . G . PASS END=114354529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 114354530 . C . PASS END=114354536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 114354537 . G . PASS END=114354541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 114354542 . G . PASS END=114354542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 114354543 . G . PASS END=114354547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 114354548 . G . PASS END=114354552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 114354553 . G . PASS END=114354553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,643:0,5,255:16,0 chr1 114354554 . G . PASS END=114354554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 114354555 . G . PASS END=114354590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 114354591 . T . PASS END=114354591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 114354592 . G . PASS END=114354616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:22,0 chr1 114354617 . G . PASS END=114354622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 114354623 . C . PASS END=114354626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 114354627 . G . PASS END=114354628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 114354629 . C . PASS END=114354634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:16,0 chr1 114354635 . C . PASS END=114354653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,466:0,39,255:13,0 chr1 114354654 . T C, 48.48 PASS DP=13;MQ=249.69;MQRankSum=1.670;ReadPosRankSum=2.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,5,0:0.385,0.000:13:7,5,0:1,0,0:47:83,0,50,179,278,457:155,0,255:8,0:4.8484e+01,8.3354e-05,5.3000e+01,1.7880e+02,3.1287e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,1,4:6,2,1,4 chr1 114354655 . G . PASS END=114354681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 114354682 . C . PASS END=114354691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 114354692 . G . PASS END=114354699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 114354700 . G . PASS END=114354737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:13,0 chr1 114354738 . C . PASS END=114354738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 114354739 . T . PASS END=114354768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 114354769 . C . PASS END=114354769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 114354770 . G . PASS END=114354772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 114354773 . G . PASS END=114354775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 114354776 . G . PASS END=114354785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr1 114354786 . C . PASS END=114354786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 114354787 . C . PASS END=114354794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 114354795 . G . PASS END=114354795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 114354796 . A . LowGQ END=114354796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,258:1,0,255:8,0 chr1 114354797 . C . PASS END=114354804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 114354805 . T . PASS END=114354805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:7,0 chr1 114354806 . G . PASS END=114354808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 114354809 . G . PASS END=114354809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 114354810 . T . PASS END=114354818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 114354819 . C . PASS END=114354820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 114354821 . C . PASS END=114354827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 114354828 . G . PASS END=114354856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,219:6,0 chr1 114354857 . G . PASS END=114354857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 114354858 . T . PASS END=114354863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,241:6,0 chr1 114354864 . G . PASS END=114354872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 114354873 . T . PASS END=114354886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 114354887 . C . PASS END=114354890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 114354891 . T . LowGQ END=114354891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:6,0 chr1 114354892 . T . PASS END=114354895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 114354896 . C . PASS END=114354896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 114354897 . C . PASS END=114354904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,197:0,21,197:7,0 chr1 114354905 . C . PASS END=114354911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 114354912 . A . PASS END=114354912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 114354913 . A . PASS END=114354914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 114354915 . T . PASS END=114354922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr1 114354923 . C . PASS END=114354923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 114354924 . C . PASS END=114354924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 114354925 . G . PASS END=114354934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 114354935 . C . PASS END=114354935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 114354936 . C . PASS END=114354940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 114354941 . A . PASS END=114354941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 114354942 . T G, 48.01 PASS DP=9;MQ=250.00;MQRankSum=2.054;ReadPosRankSum=1.422;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,3,0:0.333,0.000:9:1,2,0:5,1,0:47:83,0,50,107,186,293:89,0,183:6,0:4.8009e+01,9.0343e-05,5.3000e+01,1.0727e+02,2.2028e+02,2.9578e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,2,1:3,3,3,0 chr1 114354943 . C . PASS END=114354945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 114354946 . G . PASS END=114354946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 114354947 . C . PASS END=114354971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 114354972 . T . PASS END=114354972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 114354973 . G . PASS END=114354979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 114354980 . G . PASS END=114354986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 114354987 . C . PASS END=114354990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 114354991 . T . PASS END=114354993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 114354994 . G . PASS END=114354994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 114354995 . C . PASS END=114355003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 114355004 . T . PASS END=114355004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 114355005 . G . PASS END=114355021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 114355022 . C . PASS END=114355022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 114355023 . A . PASS END=114355027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 114355028 . T . PASS END=114355028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 114355029 . G . PASS END=114355033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 114355034 . T . PASS END=114355034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 114357527 . T . PASS END=114357591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,132,255:40,0 chr1 114362170 . T . PASS END=114362276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:82:0,120,1800:0,230,255:40,0 chr1 114366092 . T . PASS END=114366126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:65:0,120,1800:0,161,255:40,0 chr1 114367764 . T . PASS END=114367794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:80:0,120,1800:0,173,255:40,0 chr1 114372214 . C . PASS END=114372287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:64:0,120,1800:0,182,255:40,0 chr1 114372288 . G . PASS END=114372318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:53:0,81,1215:0,158,255:40,0 chr1 114372319 . G . PASS END=114372326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:63:50:0,63,945:0,117,255:24,0 chr1 114372327 . T . PASS END=114372329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:51:46:0,51,765:0,138,255:18,0 chr1 114372571 . A . PASS END=114372651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,139,255:40,0 chr1 114374207 . T . PASS END=114374234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,142,255:40,0 chr1 114374235 . A . PASS END=114374269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,201,255:40,0 chr1 114374270 . G . PASS END=114374301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,150,255:40,0 chr1 114375733 . C . PASS END=114375760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,227,255:40,0 chr1 114376931 . C . PASS END=114377055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,113,1566:0,113,255:40,0 chr1 114377056 . A . PASS END=114377061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 114377532 . C . PASS END=114377567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,112,1784:0,112,255:40,0 chr1 114377568 . A G, 217.64 PASS DP=59;MQ=250.00;FractionInformativeReads=0.966 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,34,0:0,23,0:168:255,171,0,2152,171,2152:255,171,0:0,0:2.1764e+02,1.6764e+02,0.0000e+00,4.5000e+02,2.0241e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,26:0,0,32,25 chr1 114377569 . T . PASS END=114377605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,114,1710:0,137,255:40,0 chr1 114377606 . G . PASS END=114377615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:41:0,105,1575:0,112,255:38,0 chr1 114380212 . C . PASS END=114380219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,854:0,72,255:26,0 chr1 114380220 . G . PASS END=114380224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 114380225 . C . PASS END=114380225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 114380226 . T . PASS END=114380226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 114380227 . C . PASS END=114380227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 114380228 . C . PASS END=114380254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:29:0,87,1048:0,87,255:39,0 chr1 114380255 . T . PASS END=114380255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 114380256 . G . PASS END=114380306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:39:0,85,1162:0,85,255:40,0 chr1 114380307 . G . PASS END=114380307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:39:46:0,39,1339:0,39,255:37,0 chr1 114380308 . T . PASS END=114380357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1350:0,81,255:40,2 chr1 114380358 . T . PASS END=114380394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1260:0,101,255:40,0 chr1 114380395 . T C, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=2.721;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,26,0:0.542,0.000:48:9,16,0:13,10,0:48:85,0,49,918,758,1676:255,0,255:21,0:5.0000e+01,6.8857e-05,5.2334e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,16,10:12,10,14,12 chr1 114380396 . T . PASS END=114380432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,106,1721:0,106,255:40,0 chr1 114380433 . G . PASS END=114381029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:33:0,87,1242:0,89,255:40,0 chr1 114381166 . C . PASS END=114381242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:50:0,109,1738:0,109,255:40,0 chr1 114381245 . T . PASS END=114381265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,177,255:40,0 chr1 114391162 . C . PASS END=114391248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,114,1710:0,128,255:40,0 chr1 114394649 . C . PASS END=114394726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,99,1428:0,99,255:40,0 chr1 114397093 . C . PASS END=114397159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:41:0,88,1467:0,88,255:40,0 chr1 114397529 . C . PASS END=114397671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,101,1282:0,101,255:40,0 chr1 114399004 . A . PASS END=114399063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:86:0,120,1800:0,255,255:40,0 chr1 114399170 . A . PASS END=114399241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,120,1800:0,129,255:40,0 chr1 114400360 . C . PASS END=114400398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:70:0,120,1800:0,194,255:40,0 chr1 114401100 . A . PASS END=114401193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,110,1498:0,110,255:40,0 chr1 114401194 . C . PASS END=114401195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr1 114401624 . C . PASS END=114401700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:69:0,120,1800:0,197,255:40,0 chr1 114401974 . A . PASS END=114402082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,99,1466:0,99,255:40,0 chr1 114414159 . C . PASS END=114414245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,145,255:40,0 chr1 114415368 . G C, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,10,0:0,15,0:72:160,75,0,940,75,940:255,75,0:0,0:1.2178e+02,7.1782e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,15:0,0,13,12 chr1 114423719 . T . PASS END=114423762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:41:0,105,1535:0,105,255:40,0 chr1 114424395 . C . PASS END=114424400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 114424401 . T . PASS END=114424417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:23,0 chr1 114424418 . A . PASS END=114424418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 114424419 . C . PASS END=114424422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114424423 . C . PASS END=114424423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 114424424 . G . PASS END=114424440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:31,0 chr1 114424441 . T . PASS END=114424441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:30,0 chr1 114424442 . T . PASS END=114424444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:31:0,89,1194:0,89,255:36,0 chr1 114424445 . T . PASS END=114424445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr1 114424446 . C . PASS END=114424533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:32:0,88,1039:0,88,255:36,0 chr1 114424534 . A . PASS END=114424534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 114424535 . A . PASS END=114424563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1173:0,86,255:34,0 chr1 114424564 . T . PASS END=114424594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 114424595 . C . PASS END=114424600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 114424601 . C T, 124.78 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,13,0:0,13,0:75:163,78,0,952,78,952:255,78,0:0,0:1.2478e+02,7.4782e+01,2.5886e-07,4.5000e+02,1.0955e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,22:0,0,15,11 chr1 114424602 . C . PASS END=114424619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr1 114429159 . C . PASS END=114429159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 114429160 . T . PASS END=114429160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 114429161 . G . PASS END=114429206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1044:0,90,255:37,0 chr1 114429207 . T . PASS END=114429208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:33,0 chr1 114429209 . C . PASS END=114429276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1119:0,82,255:36,0 chr1 114429277 . T . PASS END=114429278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 114429279 . T . PASS END=114429280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 114429871 . C . PASS END=114429997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:37:0,96,1329:0,111,255:40,0 chr1 114437687 . T . PASS END=114437687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:40,0 chr1 114437688 . T . PASS END=114438076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:38:0,81,1215:0,100,255:40,0 chr1 114438077 . T . PASS END=114438095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,68,255:26,0 chr1 114438096 . T . PASS END=114438096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr1 114438097 . C . PASS END=114438099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 114438100 . C . PASS END=114438114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 114438379 . C . PASS END=114438389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 114438390 . A . PASS END=114438391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 114438392 . G . PASS END=114438418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:26,0 chr1 114438419 . A . PASS END=114438421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 114438422 . A . PASS END=114438423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 114438424 . G . PASS END=114438640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:31:0,80,1085:0,80,255:40,0 chr1 114438641 . A . PASS END=114438647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 114438648 . T . PASS END=114438649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 114438650 . T . PASS END=114438650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 114438651 . T . PASS END=114438652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 114438653 . T . PASS END=114438653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 114438654 . T . PASS END=114438660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1084:0,87,255:29,0 chr1 114438878 . A . PASS END=114438878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 114438880 . C . PASS END=114438881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 114438882 . A . PASS END=114438886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr1 114438887 . G . PASS END=114438887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 114438888 . T . PASS END=114439038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:30:0,87,1117:0,90,255:40,0 chr1 114439039 . G . PASS END=114439039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:31,0 chr1 114439040 . A . PASS END=114439055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:32,0 chr1 114439056 . A . PASS END=114439062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1064:0,76,255:26,0 chr1 114439063 . G . PASS END=114439063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr1 114439064 . T . PASS END=114439066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 114439067 . C . PASS END=114439070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 114439071 . A . PASS END=114439073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 114439074 . A . PASS END=114439074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:24,0 chr1 114439075 . G . PASS END=114439081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1015:0,71,255:25,0 chr1 114439082 . C . PASS END=114439082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 114439083 . T . PASS END=114439087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 114440462 . C . PASS END=114440565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:36:0,91,1343:0,91,255:40,0 chr1 114440649 . T . PASS END=114440668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,134,255:40,0 chr1 114441340 . C . PASS END=114441352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1227:0,86,255:35,0 chr1 114441353 . C . PASS END=114441353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 114441354 . T . PASS END=114441400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1215:0,87,255:40,0 chr1 114441401 . T . PASS END=114441423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 114441425 . T . PASS END=114441425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 114441706 . A . PASS END=114441711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1174:0,99,255:34,0 chr1 114441712 . G . PASS END=114441712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:33,0 chr1 114441713 . C . PASS END=114441713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 114441714 . C . PASS END=114441715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1252:0,69,255:34,0 chr1 114441716 . G . PASS END=114441844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:36:0,96,1440:0,108,255:40,0 chr1 114442526 . C . PASS END=114442558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:26,0 chr1 114442559 . C . PASS END=114442561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 114442562 . A . PASS END=114442566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 114442567 . T . PASS END=114442597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:32,0 chr1 114442598 . C . PASS END=114442598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:28,0 chr1 114442599 . C . PASS END=114442611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1141:0,90,255:31,0 chr1 114442612 . T . PASS END=114442612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 114442613 . C . PASS END=114442617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 114442618 . T . PASS END=114442618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 114442619 . T . PASS END=114442625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 114442626 . T . PASS END=114442626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:26,0 chr1 114442627 . T . PASS END=114442637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 114442638 . C . PASS END=114442638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 114442639 . T . PASS END=114442642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 114442643 . C . PASS END=114442644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 114442645 . T . PASS END=114442652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1080:0,80,255:31,0 chr1 114442653 . T . PASS END=114442653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1036:0,68,255:30,0 chr1 114442654 . T . PASS END=114442657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1257:0,89,255:33,0 chr1 114442658 . T . PASS END=114442658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:29,0 chr1 114442659 . G . PASS END=114442708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1202:0,86,255:33,0 chr1 114442709 . A . PASS END=114442709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:28,0 chr1 114442710 . G . PASS END=114442710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:28,1 chr1 114442711 . T . PASS END=114442711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:28,0 chr1 114442712 . G . PASS END=114442751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,83,255:35,0 chr1 114442752 . A . PASS END=114442752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1148:0,75,255:33,0 chr1 114442753 . G . PASS END=114442994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1178:0,83,255:40,0 chr1 114442995 . C . PASS END=114442997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 114442998 . G . PASS END=114443018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr1 114443019 . C . PASS END=114443019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 114443020 . A . PASS END=114443020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:26,0 chr1 114443021 . T . PASS END=114443022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 114443858 . C . PASS END=114443861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1095:0,96,255:32,0 chr1 114443862 . T . PASS END=114443868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1107:0,83,255:32,0 chr1 114443869 . A . PASS END=114443869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1152:0,69,255:34,0 chr1 114443870 . T . PASS END=114443898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,101,1412:0,101,255:40,0 chr1 114443899 . G A, 47.47 PASS DP=47;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=1.482;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:13,8,0:13,11,0:46:82,0,50,577,930,1506:255,0,255:23,0:4.7466e+01,9.9662e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,9,12,7:14,12,9,10 chr1 114443900 . C . PASS END=114443936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,108,1485:0,108,255:40,0 chr1 114443937 . A . PASS END=114444005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:35:0,90,1324:0,93,255:40,0 chr1 114444377 . C . PASS END=114444499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1260:0,99,255:40,0 chr1 114444500 . C . PASS END=114444507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:26,0 chr1 114445255 . C . PASS END=114445255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 114445260 . C . PASS END=114445263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:30,0 chr1 114445264 . G . PASS END=114445264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 114445265 . G . PASS END=114445280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1133:0,85,255:35,0 chr1 114445281 . A . PASS END=114445281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:33,0 chr1 114445282 . A . PASS END=114445483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:36:0,81,1215:0,84,255:40,0 chr1 114445484 . C . PASS END=114445484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 114445486 . T . PASS END=114445486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 114445494 . G . PASS END=114445494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 114447227 . C . PASS END=114447258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:26,0 chr1 114447259 . C . PASS END=114447259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114447260 . A . PASS END=114447260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 114447261 . G . PASS END=114447290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1057:0,84,255:29,0 chr1 114447291 . G . PASS END=114447302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,83,255:25,0 chr1 114447303 . G . PASS END=114447304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 114447305 . T . PASS END=114447310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 114447311 . A . PASS END=114447311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:23,0 chr1 114447312 . C . PASS END=114447314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,861:0,36,255:24,0 chr1 114447315 . C . PASS END=114447315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 114447316 . G . PASS END=114447317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 114447318 . C . PASS END=114447318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 114447319 . C . PASS END=114447320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 114447321 . C . PASS END=114447321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 114447322 . G . PASS END=114447323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 114447324 . A . PASS END=114447324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 114447325 . G . PASS END=114447330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:21,0 chr1 114447331 . G . PASS END=114447331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 114447332 . T . PASS END=114447333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 114447334 . C . PASS END=114447334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 114447335 . G . PASS END=114447337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:22:0,30,761:0,30,255:20,0 chr1 114447338 . A . PASS END=114447338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 114447339 . T . PASS END=114447339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 114448209 . A . PASS END=114448227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,405:0,36,255:13,0 chr1 114448228 . C . PASS END=114448248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr1 114448249 . A . PASS END=114448249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 114448250 . C . PASS END=114448251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 114448252 . T . PASS END=114448264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 114448265 . C . PASS END=114448265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 114448266 . C . PASS END=114448284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 114448285 . T . PASS END=114448285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 114448286 . C . PASS END=114448288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 114448289 . C . PASS END=114448289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 114448290 . T . PASS END=114448302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 114448303 . T . PASS END=114448313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 114448314 . C . PASS END=114448314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr1 114448315 . A . PASS END=114448315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 114448316 . C . PASS END=114448324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 114448325 . C . PASS END=114448327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 114448328 . G . PASS END=114448332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,74,255:21,0 chr1 114448333 . G . PASS END=114448333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr1 114448334 . C . PASS END=114448337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:22,0 chr1 114448338 . T . PASS END=114448338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 114448339 . G . PASS END=114448346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 114448347 . C . PASS END=114448354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 114448355 . C . PASS END=114448357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 114448358 . C . PASS END=114448387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,660:0,54,255:19,0 chr1 114448388 . T . PASS END=114448389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:13,0 chr1 114448390 . A . PASS END=114448397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr1 114449618 . G . PASS END=114449631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,815:0,62,255:26,0 chr1 114449632 . G . PASS END=114449638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 114449639 . G . PASS END=114449640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:27,0 chr1 114449641 . C . PASS END=114449642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 114449643 . T . PASS END=114449643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:26,0 chr1 114449644 . G . PASS END=114449645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 114449646 . A . PASS END=114449646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 114449647 . G . PASS END=114449656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1013:0,90,255:31,0 chr1 114449657 . A . PASS END=114449657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:29,0 chr1 114449658 . G . PASS END=114449735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:33:0,80,1376:0,80,255:40,0 chr1 114449736 . C . PASS END=114449736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1439:0,69,255:39,0 chr1 114449737 . T . PASS END=114449769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:42:0,80,1344:0,80,255:40,0 chr1 114449770 . C . PASS END=114449770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:38,0 chr1 114449771 . A . PASS END=114449771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr1 114449772 . T . PASS END=114449772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:24:42:0,24,1294:0,24,255:30,0 chr1 114449773 . C . PASS END=114449773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr1 114449774 . C . PASS END=114449774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:31,0 chr1 114449775 . T . PASS END=114449775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:7:42:0,7,1247:0,7,255:28,0 chr1 114449776 . C . PASS END=114449776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1396:0,76,255:26,0 chr1 114449777 . T . PASS END=114449777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:16:42:0,16,1310:0,16,255:26,0 chr1 114449778 . A . PASS END=114449778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:84:42:0,84,1260:0,93,255:26,0 chr1 114449779 . C . PASS END=114449781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:62:41:0,62,1396:0,62,255:26,0 chr1 114449782 . A . PASS END=114449782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1217:0,53,255:23,0 chr1 114449783 . G . PASS END=114449783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:36:0,75,1125:0,91,255:24,0 chr1 114450631 . G . PASS END=114450813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:33:0,83,1299:0,83,255:40,0 chr1 114453753 . G . PASS END=114453756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr1 114453757 . C . PASS END=114453841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:37,0 chr1 114453842 . T . PASS END=114453842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1124:0,66,255:33,0 chr1 114453843 . T . PASS END=114453889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1185:0,86,255:36,0 chr1 114453890 . G . PASS END=114453890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 114453891 . C . PASS END=114453973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1180:0,87,255:36,0 chr1 114453974 . A . PASS END=114454007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,840:0,72,255:25,0 chr1 114454008 . A . PASS END=114454008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 114454009 . C . PASS END=114454013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 114454014 . A . PASS END=114454015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 114454016 . A . PASS END=114454016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:16,0 chr1 114454017 . T . PASS END=114454026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:18,0 chr1 114454027 . C . PASS END=114454035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 114454036 . T . PASS END=114454036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 114454037 . G . PASS END=114454043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:25,0 chr1 114454044 . C . PASS END=114454044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 114454045 . C . PASS END=114454047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 114454048 . T . PASS END=114454056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 114454057 . G . PASS END=114454060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,677:0,60,255:20,0 chr1 114454061 . C . PASS END=114454063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 114454064 . G . PASS END=114454073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 114454074 . C . PASS END=114454078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 114454079 . C . PASS END=114454079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 114454080 . T . PASS END=114454085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 114454086 . C . PASS END=114454090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 114454091 . C . PASS END=114454091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 114454092 . A . PASS END=114454115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 114454116 . G . PASS END=114454139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 114454140 . G . PASS END=114454140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 114454141 . T . PASS END=114454141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 114454142 . C . PASS END=114454163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:26,0 chr1 114454164 . C . PASS END=114454165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 114454166 . C . PASS END=114454171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 114454172 . C . PASS END=114454175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 114454176 . A . PASS END=114454178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:25,0 chr1 114454179 . C . PASS END=114454204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1075:0,96,255:33,0 chr1 114454205 . T . PASS END=114454205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 114454206 . C . PASS END=114454323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1149:0,82,255:40,0 chr1 114454324 . A . PASS END=114454324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,91,255:26,0 chr1 114454325 . A . PASS END=114454342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:31,0 chr1 114454343 . A . PASS END=114454343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1140:0,60,255:30,0 chr1 114454344 . A . PASS END=114454349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1086:0,90,255:30,0 chr1 114454350 . C . PASS END=114454350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 114454351 . T . PASS END=114454353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 114454354 . C . PASS END=114454355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 114454356 . G . PASS END=114454365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:29,0 chr1 114454366 . C . PASS END=114454366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 114454367 . C . PASS END=114454407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1163:0,80,255:34,0 chr1 114454408 . G . PASS END=114454415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 114454416 . T . PASS END=114454426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 114454427 . T . PASS END=114454435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,852:0,67,255:26,0 chr1 114454436 . G . PASS END=114454438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 114454439 . T . PASS END=114454440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 114454441 . G . PASS END=114454442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 114454443 . A . PASS END=114454445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 114454446 . A . PASS END=114454486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1156:0,89,255:31,0 chr1 114454487 . T . PASS END=114454487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 114454488 . T . PASS END=114454512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1162:0,83,255:33,0 chr1 114454513 . G . PASS END=114454513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:27,0 chr1 114454514 . C . PASS END=114454559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1100:0,80,255:34,0 chr1 114454560 . A . PASS END=114454560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 114454561 . G . PASS END=114454563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:32,0 chr1 114454564 . A . PASS END=114454564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 114454565 . A . PASS END=114454567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1123:0,80,255:32,0 chr1 114454568 . G . PASS END=114454568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 114454569 . G . PASS END=114454598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1157:0,82,255:34,0 chr1 114454599 . A . PASS END=114454599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1064:0,52,255:30,0 chr1 114454600 . T . PASS END=114454609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1127:0,85,255:34,0 chr1 114454610 . G . PASS END=114454610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,955:0,35,255:30,0 chr1 114454611 . G . PASS END=114454612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,985:0,68,255:32,0 chr1 114454613 . C . PASS END=114454813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:34:0,82,1129:0,82,255:40,0 chr1 114471944 . A . PASS END=114471964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,870:0,75,255:26,0 chr1 114471965 . C . PASS END=114472066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1045:0,81,255:37,0 chr1 114472067 . G . PASS END=114472067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:32,0 chr1 114472068 . C . PASS END=114472102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1205:0,88,255:34,0 chr1 114472103 . T . PASS END=114472125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 114472126 . A . PASS END=114472137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,599:0,40,255:19,0 chr1 114472138 . G . PASS END=114472138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:15,0 chr1 114472139 . C . PASS END=114472140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:16,0 chr1 114472141 . G . PASS END=114472141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:15,0 chr1 114472142 . C . PASS END=114472150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,517:0,40,255:17,0 chr1 114472151 . C . PASS END=114472153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,521:0,34,255:13,0 chr1 114472154 . A . PASS END=114472154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:11,0 chr1 114483004 . G . PASS END=114483141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:33:0,81,1166:0,88,255:40,0 chr1 114483142 . G . PASS END=114483142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 114483143 . C . PASS END=114483205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1169:0,80,255:33,0 chr1 114483206 . C . PASS END=114483206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 114483207 . C . PASS END=114483226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 114483227 . C . PASS END=114483229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 114483230 . C . PASS END=114483233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 114483234 . C . PASS END=114483237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1024:0,71,255:26,0 chr1 114483238 . C . PASS END=114483238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 114483239 . T . PASS END=114483242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1123:0,77,255:26,0 chr1 114483243 . G . PASS END=114483249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 114483250 . A . PASS END=114483251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 114483252 . C . PASS END=114483252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,974:0,54,255:24,0 chr1 114483253 . A . PASS END=114483278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1027:0,87,255:29,0 chr1 114483279 . T . PASS END=114483285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 114483286 . G . PASS END=114483489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1020:0,87,255:40,0 chr1 114483490 . T . PASS END=114483490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:34,0 chr1 114483491 . G . PASS END=114483519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:35:0,83,1088:0,83,255:37,0 chr1 114483520 . A . PASS END=114483520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1168:0,74,255:33,0 chr1 114483521 . A . PASS END=114483552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:35:0,80,1267:0,80,255:36,0 chr1 114483553 . T . PASS END=114483553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1205:0,78,255:33,0 chr1 114483554 . T . PASS END=114483586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:33:0,80,1202:0,80,255:35,0 chr1 114483587 . G . PASS END=114483603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,937:0,62,255:26,0 chr1 114483604 . C . PASS END=114483652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1095:0,82,255:33,0 chr1 114483653 . G . PASS END=114483654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 114483655 . C . PASS END=114483676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1077:0,80,255:31,0 chr1 114483677 . C . PASS END=114483679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 114483680 . C . PASS END=114483917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1251:0,98,255:40,0 chr1 114483918 . A . PASS END=114483918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1149:0,55,255:29,0 chr1 114483919 . A . PASS END=114483934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1208:0,83,255:32,0 chr1 114483935 . T . PASS END=114483947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:26:0,66,955:0,66,255:26,0 chr1 114483948 . G . PASS END=114483948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114483949 . A . PASS END=114483949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:26,0 chr1 114483950 . C . PASS END=114483950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 114483951 . C . PASS END=114483951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:28,0 chr1 114483952 . T . PASS END=114483952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 114483953 . T . PASS END=114483953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 114483954 . A . PASS END=114483959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1164:0,90,255:31,0 chr1 114483960 . G . PASS END=114483960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 114483961 . A . PASS END=114483962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1127:0,93,255:31,0 chr1 114483963 . A . PASS END=114483963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 114483964 . A . PASS END=114483977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1149:0,82,255:32,0 chr1 114483978 . G . PASS END=114483978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 114483979 . A . PASS END=114483987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 114483988 . G . PASS END=114483988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:29,0 chr1 114483989 . C . PASS END=114483995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:32,0 chr1 114483996 . T . PASS END=114483996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr1 114483997 . A . PASS END=114484046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:32,0 chr1 114484047 . G . PASS END=114484065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:26,0 chr1 114484066 . A . PASS END=114484066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:18,0 chr1 114484067 . G . PASS END=114484067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 114484068 . T . PASS END=114484073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:16,0 chr1 114484074 . T . PASS END=114484081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:17:0,36,540:0,51,255:13,0 chr1 114495388 . A . PASS END=114495388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:79:47:0,79,1449:0,79,255:40,0 chr1 114495389 . G . PASS END=114495391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 114495392 . C . PASS END=114495511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,120,1800:0,126,255:40,0 chr1 114497255 . A . PASS END=114497392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:40:0,90,1350:0,105,255:40,1 chr1 114498185 . A . PASS END=114498271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:59:0,120,1800:0,161,255:40,2 chr1 114499249 . G . PASS END=114499433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:59:0,120,1800:0,168,255:40,0 chr1 114499746 . T . PASS END=114499749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:38:0,82,1274:0,82,255:36,1 chr1 114499750 . A . PASS END=114499750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:37,0 chr1 114499751 . A . PASS END=114499903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:32:0,81,1215:0,91,255:40,0 chr1 114499904 . A . PASS END=114499908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,73,255:26,0 chr1 114500688 . G . PASS END=114500883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1086:0,87,255:40,0 chr1 114500884 . C . PASS END=114500888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 114500889 . A . PASS END=114500889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 114500890 . T . PASS END=114500907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,71,255:26,0 chr1 114500908 . T . PASS END=114500908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,827:0,56,255:22,0 chr1 114500909 . T . PASS END=114500911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 114500912 . A . PASS END=114500912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 114500913 . A . PASS END=114500913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 114504939 . C . PASS END=114504940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr1 114504941 . G . PASS END=114504941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 114504942 . G . PASS END=114504948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1056:0,87,255:30,0 chr1 114504949 . A . PASS END=114504949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 114504950 . G . PASS END=114504959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1111:0,90,255:31,0 chr1 114504960 . A . PASS END=114504960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1005:0,79,255:29,0 chr1 114504961 . G . PASS END=114504962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 114504963 . A . PASS END=114504980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1227:0,86,255:36,0 chr1 114504981 . G . PASS END=114504982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:36,0 chr1 114504983 . A . PASS END=114504983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 114504984 . T . PASS END=114504984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 114504985 . G . PASS END=114504999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,120,1800:0,129,255:40,0 chr1 114505000 . G A, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.415;ReadPosRankSum=1.319;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,27,0:0.628,0.000:43:12,11,0:4,16,0:45:85,0,44,966,572,1538:255,0,255:15,0:5.0000e+01,1.2296e-04,4.7378e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,14,13:8,8,10,17 chr1 114505001 . A . PASS END=114505037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:38:0,85,1395:0,85,255:40,0 chr1 114505038 . T . PASS END=114505051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1180:0,85,255:31,0 chr1 114505052 . C . PASS END=114505052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:27,0 chr1 114505053 . T . PASS END=114505055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 114505056 . C . PASS END=114505057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1102:0,77,255:26,0 chr1 114505058 . C . PASS END=114505060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 114506009 . G . PASS END=114506035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:19,0 chr1 114506036 . A . PASS END=114506037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 114506038 . T . PASS END=114506038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 114506039 . C . PASS END=114506046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 114506047 . T . PASS END=114506090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,675:0,41,255:19,0 chr1 114506091 . T . PASS END=114506091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 114506092 . G . PASS END=114506096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 114506097 . G . PASS END=114506097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 114506098 . C . PASS END=114506102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 114506103 . C . PASS END=114506103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr1 114506104 . C . PASS END=114506104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 114506105 . G . LowGQ END=114506105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,404:2,0,255:11,0 chr1 114506106 . G . PASS END=114506106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 114506107 . C . PASS END=114506107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 114506108 . C . PASS END=114506108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 114506109 . G . PASS END=114506109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 114506110 . G . PASS END=114506112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 114506113 . G . PASS END=114506113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr1 114506114 . G . PASS END=114506114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 114506115 . C . LowGQ END=114506118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:13:0,0,271:0,0,255:12,0 chr1 114506119 . G . PASS END=114506120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,421:0,39,255:13,0 chr1 114506121 . T . PASS END=114506121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,327:0,6,255:10,0 chr1 114506122 . T . PASS END=114506125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 114506126 . C . PASS END=114506126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,347:0,6,255:10,0 chr1 114506127 . A . PASS END=114506127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 114506128 . G . PASS END=114506128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,344:0,22,255:10,0 chr1 114506129 . A . PASS END=114506129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 114506130 . C . PASS END=114506130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 114506131 . T . LowGQ END=114506131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:11,0 chr1 114506132 . G . PASS END=114506132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 114506133 . C . PASS END=114506134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 114506135 . G . PASS END=114506136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 114506137 . T . PASS END=114506139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 114506140 . A . PASS END=114506140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 114506141 . C . LowGQ END=114506141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 114506142 . T . PASS END=114506143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 114508752 . C . PASS END=114508758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,690:0,51,255:18,0 chr1 114508759 . G . PASS END=114508761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,892:0,69,255:26,0 chr1 114508762 . C . PASS END=114508780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1023:0,81,255:30,0 chr1 114508781 . T . PASS END=114508781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr1 114508782 . C . PASS END=114508785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr1 114508786 . T . PASS END=114508786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 114508787 . G . PASS END=114508875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1093:0,80,255:39,0 chr1 114508876 . A . PASS END=114508876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:30,0 chr1 114508877 . G . PASS END=114508894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,87,255:32,0 chr1 114510388 . G . PASS END=114510396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:18,0 chr1 114510397 . C . PASS END=114510408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 114510409 . C . PASS END=114510409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 114510410 . C . PASS END=114510411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 114510412 . G . PASS END=114510551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:31:0,87,1305:0,93,255:40,0 chr1 114510552 . C . PASS END=114510552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:31,0 chr1 114510553 . A . PASS END=114510561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1260:0,97,255:30,0 chr1 114510562 . C . PASS END=114510566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1080:0,69,255:26,0 chr1 114510567 . C . PASS END=114510570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 114511064 . G . PASS END=114511075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,717:0,52,255:21,0 chr1 114511076 . T . PASS END=114511095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,847:0,65,255:26,0 chr1 114511096 . A . PASS END=114511235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,970:0,80,255:40,0 chr1 114511236 . G . PASS END=114511236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:29,0 chr1 114511237 . A . PASS END=114511251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,86,255:30,0 chr1 114511252 . A . PASS END=114511255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:26,0 chr1 114511256 . A . PASS END=114511257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 114511258 . A . PASS END=114511270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr1 114512578 . C . PASS END=114512579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 114512580 . C . PASS END=114512582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 114512583 . G . PASS END=114512583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 114512584 . A . PASS END=114512586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 114512587 . G . PASS END=114512587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 114512588 . A . PASS END=114512589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114512590 . G . PASS END=114512590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 114512591 . C . PASS END=114512591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114512592 . C . PASS END=114512592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 114512593 . A . PASS END=114512607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:34,0 chr1 114512608 . C . PASS END=114512608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:33,0 chr1 114512609 . A . PASS END=114512657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:30:0,84,1209:0,86,255:35,0 chr1 114512658 . G . PASS END=114512658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 114512659 . C . PASS END=114512662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 114512663 . T . PASS END=114512669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:27:0,68,1022:0,68,255:26,0 chr1 114512670 . C . PASS END=114512670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 114512671 . T . PASS END=114512673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 114512674 . T . PASS END=114512675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 114512676 . C . PASS END=114512676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 114512677 . C . PASS END=114512697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 114512698 . T . PASS END=114512698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 114512699 . A . PASS END=114512779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1156:0,85,255:33,0 chr1 114512780 . A . PASS END=114512780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 114512781 . C . PASS END=114512786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 114512787 . T . PASS END=114512789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 114512790 . G . PASS END=114512797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 114512798 . A . PASS END=114512811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr1 114512812 . G . PASS END=114512819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,56,255:19,0 chr1 114514446 . G . PASS END=114514461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,824:0,63,255:24,0 chr1 114514462 . G . PASS END=114514477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:29,0 chr1 114514478 . T . PASS END=114514478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:27,0 chr1 114514479 . C . PASS END=114514481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 114514482 . T . PASS END=114514482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 114514483 . G . PASS END=114514483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 114514484 . A . PASS END=114514484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 114514485 . G . PASS END=114514485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 114514486 . T . PASS END=114514492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr1 114514493 . T . PASS END=114514493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 114514494 . C . PASS END=114514508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1218:0,93,255:32,0 chr1 114514509 . T . PASS END=114514509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 114514510 . C . PASS END=114514566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:32:0,82,1239:0,82,255:37,0 chr1 114514567 . T . PASS END=114514567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1244:0,75,255:35,0 chr1 114514568 . C . PASS END=114514593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1341:0,81,255:39,0 chr1 114514594 . C . PASS END=114514594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1371:0,62,255:33,0 chr1 114514595 . T . PASS END=114514614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1350:0,99,255:34,0 chr1 114514615 . C . PASS END=114514615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:28,0 chr1 114514616 . A . PASS END=114514625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 114514626 . C . PASS END=114514626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 114514627 . T . PASS END=114514635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 114514636 . A . PASS END=114514642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 114514643 . C . PASS END=114514643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114514644 . T . PASS END=114514660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,68,255:26,0 chr1 114515646 . A . PASS END=114515646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 114515647 . A . PASS END=114515647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 114515648 . C . PASS END=114515651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 114515652 . C . PASS END=114515652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr1 114515653 . A . PASS END=114515653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 114515654 . G . LowGQ END=114515654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,590:12,0,255:16,0 chr1 114515655 . T . PASS END=114515656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 114515657 . A . PASS END=114515657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:16,0 chr1 114515658 . T . PASS END=114515669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:19,0 chr1 114515670 . A . PASS END=114515670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:19,0 chr1 114515671 . C . PASS END=114515673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 114515674 . C . PASS END=114515674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,660:0,29,255:17,0 chr1 114515675 . A . PASS END=114515679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:18,0 chr1 114515680 . A . PASS END=114515680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 114515681 . G . PASS END=114515682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:18,0 chr1 114515683 . G . PASS END=114515683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 114515684 . A . PASS END=114515686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,641:0,41,255:18,0 chr1 114515687 . C . PASS END=114515689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr1 114515690 . C . PASS END=114515691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:16,0 chr1 114515692 . A . PASS END=114515692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:14,0 chr1 114515693 . C . PASS END=114515693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 114515694 . C . PASS END=114515694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:11,0 chr1 114515695 . C . PASS END=114515696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,643:0,26,255:11,0 chr1 114515697 . G . PASS END=114515703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:31:16:0,31,495:0,31,255:11,0 chr1 114515704 . G . PASS END=114515704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:12,0 chr1 114515705 . C . PASS END=114515705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:12,0 chr1 114515706 . A . LowGQ END=114515706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 114515707 . G . PASS END=114515707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 114515708 . G . PASS END=114515708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:13,0 chr1 114515709 . C . PASS END=114515714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 114515715 . G . PASS END=114515716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 114515717 . G A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=0.530;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,9,0:0.600,0.000:15:3,5,0:3,4,0:48:85,0,49,293,207,500:255,0,180:5,0:5.0000e+01,7.1964e-05,5.1833e+01,2.9323e+02,2.4144e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,5,4:2,4,5,4 chr1 114515718 . T . PASS END=114515723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 114515724 . G . PASS END=114515725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,464:0,28,255:12,0 chr1 114515726 . C . PASS END=114515731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 114515732 . C . PASS END=114515736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 114515737 . A . PASS END=114515740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 114515741 . C . PASS END=114515751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,53,255:22,0 chr1 114515752 . T . PASS END=114515754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 114515755 . A . PASS END=114515770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,892:0,62,255:26,0 chr1 114515771 . A . PASS END=114516029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1158:0,85,255:40,0 chr1 114516030 . C . PASS END=114516030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 114516031 . A . PASS END=114516101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1125:0,83,255:38,0 chr1 114516102 . C . PASS END=114516115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,84,255:26,0 chr1 114516116 . C . PASS END=114516116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 114516117 . C . PASS END=114516134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 114522139 . A . PASS END=114522150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1317:0,105,255:38,0 chr1 114522151 . A . PASS END=114522151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:38,0 chr1 114522152 . C . PASS END=114522247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1125:0,80,255:40,0 chr1 114522248 . T . PASS END=114522252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,1048:0,66,255:26,0 chr1 114522695 . A . PASS END=114522748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,107,1427:0,107,255:40,0 chr1 114522954 . G . PASS END=114523031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,768:0,63,255:26,0 chr1 114523032 . C . PASS END=114523239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1180:0,87,255:40,0 chr1 114523571 . A . PASS END=114523572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr1 114523573 . T . PASS END=114523573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 114523574 . G . PASS END=114523585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:25,0 chr1 114523586 . T . PASS END=114523586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 114523587 . C . PASS END=114523589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 114523590 . T . PASS END=114523590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 114523591 . C . PASS END=114523601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,895:0,65,255:26,0 chr1 114523602 . A . PASS END=114523602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114523603 . A . PASS END=114523603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 114523604 . T . PASS END=114523604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 114523605 . G . PASS END=114523606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:25,0 chr1 114523607 . A . PASS END=114523614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 114523615 . A . PASS END=114523615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 114523616 . A . PASS END=114523627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 114523628 . G . PASS END=114523663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 114523664 . A . PASS END=114523697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,637:0,53,255:19,0 chr1 114523698 . G . PASS END=114523704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 114523705 . A . PASS END=114523729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,668:0,54,255:18,0 chr1 114523730 . G . PASS END=114523730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 114523731 . T . PASS END=114523752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,690:0,44,255:19,0 chr1 114523753 . G . PASS END=114523761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 114523762 . G . PASS END=114523774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 114523775 . G . PASS END=114523775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:17,0 chr1 114523776 . G . PASS END=114523780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,743:0,47,255:19,0 chr1 114523781 . C . PASS END=114523782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 114523783 . T . PASS END=114523783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 114523784 . T . PASS END=114523788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:23,0 chr1 114523789 . T . PASS END=114523789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,727:0,36,255:19,0 chr1 114523790 . G . PASS END=114523800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 114523801 . G . PASS END=114523806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 114523807 . C . PASS END=114523807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 114523808 . T . PASS END=114523853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1238:0,92,255:37,0 chr1 114523854 . A . PASS END=114523854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1289:0,75,255:37,0 chr1 114523855 . C . PASS END=114523912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,108,1313:0,108,255:39,0 chr1 114523913 . A . PASS END=114523913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1045:0,55,255:35,0 chr1 114523914 . C . PASS END=114523914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr1 114523915 . C . PASS END=114523947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,95,255:37,0 chr1 114523948 . G . PASS END=114523958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:32:0,66,990:0,83,255:26,0 chr1 114523959 . C . PASS END=114524001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1225:0,86,255:35,0 chr1 114524002 . G . PASS END=114524002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:35,0 chr1 114524003 . C . PASS END=114524080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,86,255:36,0 chr1 114524081 . A . PASS END=114524081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 114524082 . G . PASS END=114524092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:30,0 chr1 114524093 . C . PASS END=114524093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 114524094 . A . PASS END=114524099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 114524100 . G . PASS END=114524104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 114524105 . G . PASS END=114524107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 114524108 . A . PASS END=114524110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 114524111 . C . PASS END=114524120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:27,0 chr1 114524121 . C . PASS END=114524153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,962:0,67,255:26,0 chr1 114524154 . T . PASS END=114524157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 114524158 . A . PASS END=114524159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 114524160 . C . PASS END=114524160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 114524161 . C . PASS END=114524161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 114524162 . T . PASS END=114524168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1123:0,80,255:28,0 chr1 114524169 . C . PASS END=114524169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 114524170 . G . PASS END=114524187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1139:0,80,255:34,0 chr1 114524188 . G . PASS END=114524189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:63:34:0,63,1129:0,63,255:33,0 chr1 114524190 . C . PASS END=114524234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1241:0,89,255:38,0 chr1 114524235 . G . PASS END=114524235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:30,0 chr1 114524236 . A . PASS END=114524264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1211:0,88,255:35,0 chr1 114524265 . T . PASS END=114524265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:32,0 chr1 114524266 . C . PASS END=114524278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1188:0,85,255:32,0 chr1 114524279 . G . PASS END=114524279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:30,0 chr1 114524280 . T . PASS END=114524282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:32,0 chr1 114524283 . C . PASS END=114524283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 114524284 . C . PASS END=114524285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1196:0,85,255:33,0 chr1 114524286 . T . PASS END=114524286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:32,0 chr1 114524287 . G . PASS END=114524288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1172:0,85,255:32,0 chr1 114524289 . C . PASS END=114524289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:31,0 chr1 114524290 . A . PASS END=114524293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1121:0,85,255:33,0 chr1 114524294 . T . PASS END=114524294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:24,0 chr1 114524295 . C . PASS END=114524295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:26,0 chr1 114524296 . C . PASS END=114524296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:26,0 chr1 114524297 . G . PASS END=114524300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,86,255:30,0 chr1 114524301 . T . PASS END=114524301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1178:0,75,255:26,0 chr1 114524302 . A . PASS END=114524311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1202:0,83,255:29,0 chr1 114524312 . A . PASS END=114524312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1009:0,63,255:27,0 chr1 114524313 . A . PASS END=114524315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 114524316 . C . PASS END=114524316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 114524317 . C . PASS END=114524317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 114524318 . A . PASS END=114524318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 114524319 . G . PASS END=114524321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 114524322 . C . PASS END=114524368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,925:0,62,255:26,0 chr1 114524369 . G . PASS END=114524370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 114524371 . A . PASS END=114524374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 114524375 . A . PASS END=114524391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,538:0,40,255:19,0 chr1 114634633 . T . PASS END=114634634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 114634635 . A . PASS END=114634635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 114634636 . T . PASS END=114634643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 114634644 . G . PASS END=114634644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 114634645 . A . PASS END=114634648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 114634649 . G . PASS END=114634649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 114634650 . G . PASS END=114634657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 114634658 . G . PASS END=114634659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 114634660 . T . PASS END=114634676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:17,0 chr1 114634677 . T . PASS END=114634685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:15:0,33,495:0,34,255:13,0 chr1 114634686 . T . PASS END=114634686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 114634687 . A . PASS END=114634692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 114634693 . T . PASS END=114634693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 114634694 . C . PASS END=114634695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 114634696 . G . PASS END=114634699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 114634700 . T . PASS END=114634704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 114636408 . T . PASS END=114636425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,152,255:40,0 chr1 114640349 . C . PASS END=114640358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:33,0 chr1 114640359 . G . PASS END=114640359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:30,0 chr1 114640360 . A . PASS END=114640404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1173:0,86,255:40,2 chr1 114640405 . G . PASS END=114640405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1612:0,58,255:40,2 chr1 114640406 . G . PASS END=114640499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1260:0,97,255:40,0 chr1 114641716 . C . PASS END=114641722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,164,255:40,0 chr1 114641723 . A . PASS END=114641874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:84:33:0,84,1260:0,99,255:40,0 chr1 114641875 . T . PASS END=114641887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:26,0 chr1 114646223 . C . PASS END=114646343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:32:0,90,1150:0,90,255:40,0 chr1 114680117 . A . PASS END=114680127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr1 114680128 . A . PASS END=114680215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,979:0,84,255:38,0 chr1 114680216 . G . PASS END=114680216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:32,0 chr1 114680217 . C . PASS END=114680218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 114680219 . G . PASS END=114680219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 114680220 . G . PASS END=114680251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1202:0,86,255:33,0 chr1 114680252 . C . PASS END=114680252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:31,0 chr1 114680253 . A . PASS END=114680413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1210:0,86,255:40,0 chr1 114680414 . G . PASS END=114680414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:27,0 chr1 114680415 . G . PASS END=114680418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:28,0 chr1 114680419 . G . PASS END=114680419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 114680420 . G . PASS END=114680432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:30,0 chr1 114680433 . T . PASS END=114680433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 114680434 . T . PASS END=114680444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1255:0,86,255:34,0 chr1 114680445 . A . PASS END=114680445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 114680446 . C . PASS END=114680446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1282:0,80,255:36,0 chr1 114680447 . A . PASS END=114680447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1249:0,56,255:35,0 chr1 114680448 . A . PASS END=114680453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:36,0 chr1 114680454 . G . PASS END=114680454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 114680455 . T . PASS END=114680457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1304:0,62,255:35,0 chr1 114680458 . C . PASS END=114680458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 114680459 . G . PASS END=114680459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr1 114680460 . G . PASS END=114680460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 114680461 . T . PASS END=114680468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1291:0,72,255:35,0 chr1 114680469 . T . PASS END=114680470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1405:0,81,255:34,0 chr1 114680471 . G . PASS END=114680471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:32,0 chr1 114680472 . T . PASS END=114680502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:38:0,82,1338:0,82,255:39,0 chr1 114680503 . T . PASS END=114680539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,102,1530:0,108,255:40,0 chr1 114680540 . C T, 47.82 PASS DP=36;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=3.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,15,0:0.417,0.000:36:8,10,0:13,5,0:47:83,0,50,536,751,1288:255,0,255:21,0:4.7817e+01,9.3449e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,8,7:14,7,7,8 chr1 114680541 . G . PASS END=114680577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,104,1345:0,104,255:40,0 chr1 114680578 . T . PASS END=114680642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1049:0,87,255:40,0 chr1 114680643 . T . PASS END=114680643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:26,0 chr1 114680644 . G . PASS END=114680644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 114680645 . C . PASS END=114680645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 114680646 . C . PASS END=114680667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,967:0,65,255:26,0 chr1 114680668 . A . PASS END=114680668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 114680669 . C . PASS END=114680669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 114680670 . G . PASS END=114680670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:23,0 chr1 114680671 . T . PASS END=114680675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 114682237 . C . PASS END=114682250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,830:0,66,255:24,0 chr1 114682251 . T . PASS END=114682251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 114682252 . G . PASS END=114682257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,930:0,62,255:26,0 chr1 114682258 . G . PASS END=114682263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 114682264 . T . PASS END=114682272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 114682273 . A . PASS END=114682323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1041:0,84,255:35,0 chr1 114682324 . G . PASS END=114682324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 114682325 . G . PASS END=114682327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 114682328 . T . PASS END=114682328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1217:0,74,255:31,0 chr1 114682329 . A . PASS END=114682374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:33,0 chr1 114682375 . A . PASS END=114682377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 114682378 . G . PASS END=114682400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:32,0 chr1 114682401 . C . PASS END=114682401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 114682402 . G . PASS END=114682709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:32:0,93,1180:0,96,255:40,0 chr1 114695245 . C . PASS END=114695253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 114695254 . G . PASS END=114695254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 114695255 . C . PASS END=114695257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 114695258 . C . PASS END=114695258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 114695259 . C . PASS END=114695271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 114695272 . C . PASS END=114695272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 114695273 . T . PASS END=114695290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 114695291 . C . PASS END=114695292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 114695293 . G . PASS END=114695293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 114695294 . G . PASS END=114695294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 114695295 . G . PASS END=114695308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:8,0 chr1 114696232 . C . PASS END=114696243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 114696244 . C . PASS END=114696244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 114696245 . G . PASS END=114696245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 114696246 . C . PASS END=114696246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 114696247 . T . PASS END=114696256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 114696257 . C . PASS END=114696257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 114696258 . T . PASS END=114696258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 114696259 . C . PASS END=114696260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 114696261 . G . PASS END=114696271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,901:0,72,255:25,0 chr1 114696272 . C . PASS END=114696272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 114696273 . T . PASS END=114696296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,901:0,62,255:26,0 chr1 114696297 . T . PASS END=114696297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,790:0,31,255:22,0 chr1 114696298 . C . PASS END=114696305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr1 114696306 . A . PASS END=114696306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,812:0,28,255:19,0 chr1 114696307 . G . PASS END=114696307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 114696308 . A . PASS END=114696308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,709:0,41,255:19,0 chr1 114696309 . G . PASS END=114696313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 114696314 . C . PASS END=114696314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr1 114696315 . G . PASS END=114696317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 114696318 . C . PASS END=114696318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 114696319 . G . PASS END=114696323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 114696324 . C . PASS END=114696325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 114696326 . G . PASS END=114696326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,666:0,33,255:19,0 chr1 114696327 . C . PASS END=114696327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 114696328 . A . PASS END=114696328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 114696329 . C . PASS END=114696329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:18,0 chr1 114696330 . A . PASS END=114696330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:18,0 chr1 114696331 . G . PASS END=114696347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:18,0 chr1 114696348 . A . PASS END=114696355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:34:17:0,34,540:0,34,255:13,0 chr1 114696356 . C . PASS END=114696358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 114696359 . G . PASS END=114696359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr1 114696360 . C . PASS END=114696360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 114696361 . A . PASS END=114696375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 114696376 . C . PASS END=114696385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 114696386 . T . PASS END=114696394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:6,0 chr1 114940270 . T . PASS END=114940271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 114940272 . A . PASS END=114940272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:28,0 chr1 114940273 . C . PASS END=114940273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,1030:0,32,255:28,0 chr1 114940274 . T . PASS END=114940274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,954:0,46,255:28,0 chr1 114940275 . T . PASS END=114940280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:33:0,95,1282:0,95,255:37,0 chr1 114940281 . G . PASS END=114940281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1304:0,70,255:37,0 chr1 114940282 . T . PASS END=114940283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1437:0,117,255:39,0 chr1 114940284 . C . PASS END=114940284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr1 114940285 . T . PASS END=114940288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1389:0,104,255:40,0 chr1 114940289 . C . PASS END=114940482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:91:42:0,91,1446:0,91,255:40,0 chr1 114940562 . C . PASS END=114940586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,217,255:40,0 chr1 114940587 . G . PASS END=114940612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:81:70:0,81,1215:0,193,255:40,0 chr1 114942079 . T . PASS END=114942211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:34:0,93,1272:0,95,255:40,0 chr1 114942212 . A . PASS END=114942212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:31,0 chr1 114942213 . T . PASS END=114942231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1062:0,88,255:34,0 chr1 114944011 . C . PASS END=114944085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:72:0,120,1800:0,200,255:40,0 chr1 114945382 . C . PASS END=114945505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:36:0,98,1364:0,98,255:40,0 chr1 114948032 . C . PASS END=114948033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1121:0,93,255:32,0 chr1 114948034 . T . PASS END=114948034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 114948035 . G . PASS END=114948163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:32:0,81,1158:0,81,255:40,0 chr1 114948164 . T . PASS END=114948200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,158,255:40,0 chr1 114948201 . G A, 49.18 PASS DP=62;MQ=250.00;MQRankSum=6.726;ReadPosRankSum=2.030;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,28,0:0.452,0.000:62:18,14,0:16,14,0:48:84,0,50,981,1191,2173:255,0,255:32,0:4.9184e+01,7.4034e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,13,11,17:21,13,15,13 chr1 114948202 . G . PASS END=114948253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:56:0,120,1800:0,150,255:40,0 chr1 114948254 . C . PASS END=114948254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,8:66:20:66:0,20,1744:0,20,255:40,0 chr1 114948255 . A . PASS END=114948280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,117,1800:0,117,255:40,0 chr1 114948281 . A G, 233.14 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,30,0:0,32,0:183:271,186,0,2358,186,2358:255,186,0:0,0:2.3314e+02,1.8314e+02,0.0000e+00,4.5000e+02,2.1791e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,30:0,0,28,34 chr1 114948282 . T . PASS END=114948318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,167,255:40,0 chr1 114948319 . T . PASS END=114948365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:45:0,81,1215:0,125,255:40,0 chr1 114948366 . T . PASS END=114948367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:45:0,78,1170:0,135,255:26,0 chr1 114948368 . T . PASS END=114948370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1215:0,117,255:27,0 chr1 114948371 . G . PASS END=114948381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:24,0 chr1 114949563 . C . PASS END=114949722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:39:0,90,1350:0,117,255:40,0 chr1 114951299 . C . PASS END=114951362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,138,255:40,0 chr1 114952806 . C . PASS END=114952819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 114952820 . G . PASS END=114952820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 114952821 . A . PASS END=114952844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:26,0 chr1 114952845 . G . PASS END=114952847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 114952848 . T . PASS END=114952849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 114952850 . A . PASS END=114952926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,980:0,82,255:40,0 chr1 114952927 . A . PASS END=114952938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 114963002 . C . PASS END=114963073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,81,255:40,0 chr1 114964058 . C . PASS END=114964059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1200:0,97,255:36,0 chr1 114964060 . G . PASS END=114964062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1245:0,67,255:37,0 chr1 114964063 . T . PASS END=114964066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1320:0,90,255:39,0 chr1 114964067 . T . PASS END=114964067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1326:0,68,255:38,0 chr1 114964068 . G . PASS END=114964258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:84:33:0,84,1260:0,86,255:40,0 chr1 114967193 . A . PASS END=114967350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1296:0,92,255:40,0 chr1 114967351 . T . PASS END=114967365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:27:0,60,900:0,81,255:26,0 chr1 114967366 . C . PASS END=114967377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:19,0 chr1 114968071 . C . PASS END=114968309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:81:38:0,81,1215:0,100,255:40,2 chr1 114968310 . A . PASS END=114968314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:33:0,78,1170:0,95,255:26,0 chr1 114968315 . G . PASS END=114968315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 114968316 . G . PASS END=114968317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 114968318 . G . PASS END=114968330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:19:0,42,630:0,57,255:18,0 chr1 114968331 . C . PASS END=114968345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:13:0,32,474:0,32,255:13,0 chr1 114969799 . C . PASS END=114969916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:38:0,99,1429:0,101,255:40,0 chr1 114970370 . C . PASS END=114970376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,931:0,62,255:26,1 chr1 114970377 . T . PASS END=114970377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,869:0,42,255:27,0 chr1 114970378 . T . PASS END=114970380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:31,0 chr1 114970381 . T . PASS END=114970381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,960:0,62,255:30,0 chr1 114970382 . G . PASS END=114970516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:87:36:0,87,1224:0,97,255:40,0 chr1 114973420 . C . PASS END=114973534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,201,255:40,0 chr1 114976239 . C . PASS END=114976355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,140,255:40,0 chr1 115005726 . C . PASS END=115005728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 115005729 . T . PASS END=115005729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1425:0,79,255:39,0 chr1 115005730 . G . PASS END=115005858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:36:0,93,1395:0,97,255:40,0 chr1 115006034 . C . PASS END=115006178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:41:0,93,1395:0,96,255:40,0 chr1 115006892 . C . PASS END=115007010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:93:37:0,93,1341:0,95,255:40,0 chr1 115053172 . C . PASS END=115053172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 115053173 . T . LowGQ END=115053173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 115053174 . T . PASS END=115053175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 115053176 . C . PASS END=115053176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 115053177 . T . PASS END=115053179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:12,0 chr1 115053180 . A . PASS END=115053180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 115053181 . T . PASS END=115053192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 115053193 . T . PASS END=115053193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 115053194 . G . PASS END=115053211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 115053212 . G . LowGQ END=115053212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:11,0 chr1 115053213 . C . PASS END=115053225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:13,0 chr1 115053226 . C . PASS END=115053226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 115053227 . C . PASS END=115053231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 115053232 . C . PASS END=115053236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 115053237 . A . PASS END=115053237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 115053238 . G . PASS END=115053255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:16,0 chr1 115053256 . A . PASS END=115053256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 115053257 . G . PASS END=115053272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr1 115053273 . A . PASS END=115053273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 115053274 . G . PASS END=115053307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 115053308 . C . PASS END=115053308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 115053309 . T . PASS END=115053310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 115053311 . C . PASS END=115053311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 115053312 . T . PASS END=115053315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 115053316 . A . PASS END=115053316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 115053317 . C . PASS END=115053318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 115053319 . C . PASS END=115053330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 115053331 . C . PASS END=115053331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,468:0,45,255:15,0 chr1 115053332 . C . PASS END=115053332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 115053333 . A . PASS END=115053351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:17,0 chr1 115053352 . C . PASS END=115053352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 115053353 . A . PASS END=115053357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 115053358 . G . PASS END=115053358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr1 115053359 . C . PASS END=115053373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 115053374 . A . PASS END=115053374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 115053375 . C . PASS END=115053385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 115053386 . A . PASS END=115053386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 115053387 . G . PASS END=115053421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 115053422 . G . PASS END=115053422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 115053423 . C . PASS END=115053450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,607:0,48,255:19,0 chr1 115053451 . C . PASS END=115053460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:23,0 chr1 115053461 . T . PASS END=115053461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 115053462 . G . PASS END=115053469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:23,0 chr1 115053470 . C . PASS END=115053471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 115053472 . G . PASS END=115053480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 115053481 . C . PASS END=115053481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 115053482 . C . PASS END=115053483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 115053484 . A . PASS END=115053484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 115053485 . G . PASS END=115053487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 115053488 . G . PASS END=115053515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,668:0,43,255:19,0 chr1 115053516 . C . PASS END=115053516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 115053517 . C . PASS END=115053534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 115053535 . C . PASS END=115053537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 115053538 . C . PASS END=115053538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:12,0 chr1 115053539 . G . PASS END=115053566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 115053567 . T . PASS END=115053583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:8:0,21,315:0,24,255:8,0 chr1 115053584 . G . PASS END=115053589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 115053590 . C . PASS END=115053697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 115110751 . T . PASS END=115110877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:31:0,83,1160:0,83,255:40,0 chr1 115112613 . T . PASS END=115112693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:75:0,120,1800:0,192,255:40,0 chr1 115113321 . C . PASS END=115113371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:59:0,120,1800:0,159,255:40,0 chr1 115118211 . T . PASS END=115118372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:32:0,90,1350:0,96,255:40,1 chr1 115119309 . C . PASS END=115119379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:65:0,120,1800:0,179,255:40,0 chr1 115123920 . T . PASS END=115123928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1213:0,106,255:40,0 chr1 115123929 . A . PASS END=115123929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1434:0,76,255:39,0 chr1 115123930 . G . PASS END=115124012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,105,1430:0,109,255:40,0 chr1 115124120 . C . PASS END=115124203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1211:0,84,255:40,0 chr1 115124204 . G . PASS END=115124212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 115128221 . T . PASS END=115128252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,191,255:40,0 chr1 115130008 . C . PASS END=115130094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,140,255:40,0 chr1 115130337 . C . PASS END=115130343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 115130344 . T . PASS END=115130344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 115130345 . C . PASS END=115130359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:23,0 chr1 115130360 . T . PASS END=115130360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 115130361 . C . PASS END=115130369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,823:0,62,255:26,0 chr1 115130370 . G . PASS END=115130372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 115130373 . T . PASS END=115130375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 115130376 . A . PASS END=115130389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,89,255:29,0 chr1 115130390 . T . PASS END=115130390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 115130391 . G . PASS END=115130393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 115130394 . T . PASS END=115130395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 115130396 . T . PASS END=115130398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 115130399 . A . PASS END=115130401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 115130402 . A . PASS END=115130414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1080:0,90,255:30,0 chr1 115130415 . A . PASS END=115130415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 115130416 . G . PASS END=115130424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 115130425 . A . PASS END=115130425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:30,0 chr1 115130426 . C . PASS END=115130434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:31,0 chr1 115130435 . G . PASS END=115130435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:30,0 chr1 115130436 . T . PASS END=115130452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 115130453 . G . PASS END=115130453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr1 115130454 . G . PASS END=115130488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:32,0 chr1 115130489 . A . PASS END=115130489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1276:0,78,255:30,0 chr1 115130490 . C . PASS END=115130521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1107:0,80,255:33,0 chr1 115130522 . T . PASS END=115130522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr1 115130523 . C . PASS END=115130537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1075:0,82,255:33,0 chr1 115130538 . C . PASS END=115130538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:31,0 chr1 115130539 . A . PASS END=115130540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 115130541 . A . PASS END=115130541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1054:0,66,255:29,0 chr1 115130542 . T . PASS END=115130550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 115130551 . C . PASS END=115130573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:24,0 chr1 115137094 . C . PASS END=115137168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:51:0,99,1800:0,99,255:40,0 chr1 115137169 . T . PASS END=115137178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,105,1529:0,105,255:40,0 chr1 115137179 . A . PASS END=115137179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1313:0,58,255:35,0 chr1 115137180 . A . PASS END=115137199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:42:0,87,1305:0,96,255:40,0 chr1 115138453 . C . PASS END=115138494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,135,255:40,0 chr1 115141895 . C . PASS END=115141895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 115141896 . T . PASS END=115141896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,582:0,2,255:17,0 chr1 115141897 . C . PASS END=115141903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,590:0,40,255:19,0 chr1 115141904 . G . PASS END=115141907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 115141908 . A . PASS END=115141908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 115141909 . G . PASS END=115141916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,878:0,61,255:24,0 chr1 115141917 . A . PASS END=115141918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 115141919 . C . PASS END=115141920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 115141921 . G . PASS END=115141928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 115141929 . G . PASS END=115141929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 115141930 . A . PASS END=115141931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 115141932 . C . PASS END=115141932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 115141933 . A . PASS END=115142056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:32:0,89,1164:0,89,255:40,0 chr1 115142057 . A . PASS END=115142057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:29,0 chr1 115142058 . C . PASS END=115142067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1157:0,82,255:30,0 chr1 115142068 . G . PASS END=115142072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:29:0,72,1080:0,77,255:25,0 chr1 115142825 . C . PASS END=115142833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1082:0,82,255:37,0 chr1 115142834 . T . PASS END=115142834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:35,0 chr1 115142835 . T . PASS END=115142973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:88:37:0,88,1316:0,88,255:40,0 chr1 115143441 . C . PASS END=115143581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:83:32:0,83,1142:0,83,255:40,0 chr1 115144129 . C . PASS END=115144203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:42:0,88,1270:0,88,255:40,0 chr1 115144204 . T . PASS END=115144204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1319:0,76,255:35,0 chr1 115144205 . G . PASS END=115144206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 115144746 . C . PASS END=115144815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:74:0,120,1800:0,209,255:40,0 chr1 115147543 . C . PASS END=115147652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:53:0,120,1800:0,159,255:40,0 chr1 115151307 . C . PASS END=115151459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:40:0,80,1271:0,80,255:40,0 chr1 115151460 . A . PASS END=115151462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:37,0 chr1 115151463 . C . PASS END=115151463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1442:0,87,255:35,0 chr1 115151464 . G . PASS END=115151464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr1 115151465 . G . PASS END=115151471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1404:0,87,255:35,0 chr1 115151472 . T . PASS END=115151472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:31,0 chr1 115151473 . T . PASS END=115151485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:32,0 chr1 115151486 . T . PASS END=115151486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 115151487 . A . PASS END=115151490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 115151491 . C . PASS END=115151494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr1 115153694 . T . PASS END=115153738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,150,255:40,0 chr1 115161007 . C . PASS END=115161103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:42:0,105,1426:0,105,255:40,0 chr1 115164516 . C . PASS END=115164686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:33:0,86,1190:0,86,255:40,0 chr1 115165608 . C . PASS END=115165720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,104,1584:0,104,255:40,0 chr1 115166128 . A . PASS END=115166142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1244:0,92,255:37,0 chr1 115166143 . A . PASS END=115166143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1173:0,78,255:35,0 chr1 115166144 . G . PASS END=115166264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:37:0,103,1374:0,103,255:40,0 chr1 115167800 . C . PASS END=115168059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,107,1636:0,107,255:40,0 chr1 115168060 . A . PASS END=115168096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,134,255:40,0 chr1 115168097 . T C, 35.71 PASS DP=50;MQ=250.00;MQRankSum=5.547;ReadPosRankSum=5.547;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,15,0:0.300,0.000:50:19,11,0:16,4,0:36:70,0,50,536,1244,1780:255,0,255:33,0:3.5710e+01,1.1881e-03,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,20,6,9:15,20,8,7 chr1 115168098 . C . PASS END=115168134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,144,255:40,0 chr1 115168135 . G . PASS END=115168605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:87:42:0,87,1305:0,98,255:40,0 chr1 115215735 . T . PASS END=115215893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:33:0,86,1227:0,86,255:40,0 chr1 115216260 . C . PASS END=115216370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,114,1710:0,134,255:40,0 chr1 115216380 . T . PASS END=115216380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr1 115216530 . C . PASS END=115216703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:43:0,101,1524:0,101,255:40,0 chr1 115216712 . G . PASS END=115216712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 115217373 . C . PASS END=115217381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr1 115217382 . A . PASS END=115217382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 115217383 . T . PASS END=115217394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1074:0,86,255:35,0 chr1 115217395 . G . PASS END=115217395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1207:0,77,255:35,0 chr1 115217396 . A . PASS END=115217398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1213:0,91,255:35,0 chr1 115217399 . T . PASS END=115217399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1136:0,78,255:34,0 chr1 115217400 . A . PASS END=115217476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:34:0,93,1282:0,94,255:40,0 chr1 115217477 . T . PASS END=115217477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:29,0 chr1 115217478 . A . PASS END=115217493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:31,0 chr1 115218151 . T . PASS END=115218172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:30:0,88,1123:0,88,255:35,0 chr1 115218173 . T . PASS END=115218173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr1 115218174 . G . PASS END=115218314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:36:0,80,1140:0,80,255:40,0 chr1 115218498 . A . PASS END=115218624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,102,1499:0,102,255:40,0 chr1 115219967 . C . PASS END=115219967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 115219972 . T . PASS END=115219977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,873:0,75,255:26,0 chr1 115219978 . C . PASS END=115219978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 115219979 . T . PASS END=115219979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 115219980 . G . PASS END=115220111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:27:0,80,1008:0,80,255:40,0 chr1 115220112 . C . PASS END=115220123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 115220124 . C . PASS END=115220135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:19:0,53,810:0,53,255:18,0 chr1 115220531 . C . PASS END=115220555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,107,1800:0,107,255:40,0 chr1 115220556 . C . PASS END=115220592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,120,1800:0,147,255:40,0 chr1 115220593 . G A, 50.00 PASS DP=65;MQ=250.00;MQRankSum=6.838;ReadPosRankSum=5.570;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,35,0:0.547,0.000:64:13,11,0:16,24,0:48:85,0,49,1223,1029,2252:255,0,255:29,0:5.0000e+01,6.9116e-05,5.2297e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,20,15:17,12,20,15 chr1 115220594 . T . PASS END=115220630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,165,255:40,0 chr1 115220631 . A . PASS END=115220662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:53:0,120,1800:0,141,255:40,0 chr1 115220954 . A . PASS END=115221148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:36:0,84,1260:0,92,255:40,0 chr1 115222200 . C . PASS END=115222321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:41:0,87,1305:0,107,255:40,0 chr1 115222322 . A . PASS END=115222329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:75:33:0,75,1125:0,99,255:26,0 chr1 115222880 . A . PASS END=115223067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:32:0,81,1215:0,95,255:40,0 chr1 115223068 . G . PASS END=115223070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 115223071 . C . PASS END=115223077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:29,0 chr1 115223078 . T . PASS END=115223099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:26:0,71,1039:0,71,255:25,0 chr1 115223108 . A . PASS END=115223108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 115226820 . C . PASS END=115226940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:42:0,100,1476:0,100,255:40,0 chr1 115226941 . C . PASS END=115226985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:41:0,84,1305:0,84,255:40,0 chr1 115226990 . C . LowGQ END=115226990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,6:38:0:38:0,0,992:88,0,255:29,8 chr1 115229366 . C . PASS END=115229366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 115229367 . C . PASS END=115229367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 115229368 . C . PASS END=115229372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 115229373 . G . PASS END=115229373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 115229374 . C . PASS END=115229502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:27:0,81,980:0,81,255:40,0 chr1 115229503 . C . PASS END=115229531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:25:0,68,1030:0,68,255:26,0 chr1 115231174 . C . PASS END=115231174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 115231182 . C . PASS END=115231201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,886:0,69,255:25,0 chr1 115231202 . G . PASS END=115231359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,950:0,81,255:40,0 chr1 115231360 . T . PASS END=115231361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:25,0 chr1 115231362 . T . PASS END=115231362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 115231365 . A . PASS END=115231365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 115236057 . G . PASS END=115236068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:112:0,120,1800:0,255,255:40,0 chr1 115238058 . T . PASS END=115238067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,132,255:40,0 chr1 115238068 . T . PASS END=115238191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,114,1710:0,126,255:40,2 chr1 115247285 . A . PASS END=115247285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 115247311 . A . PASS END=115247311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 115247323 . A . PASS END=115247323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 115247353 . A . PASS END=115247353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:45:0,93,1395:0,135,255:31,0 chr1 115247374 . T . PASS END=115247374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 115247612 . C . PASS END=115247612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1238:0,105,255:35,0 chr1 115247653 . G . PASS END=115247653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1460:0,112,255:40,0 chr1 115247695 . T . PASS END=115247695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1103:0,85,255:28,0 chr1 115247855 . C . PASS END=115247855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 115247871 . A . PASS END=115247871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 115247904 . G . PASS END=115247904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 115247910 . A . PASS END=115247910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 115247948 . G . PASS END=115247948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 115248001 . C . PASS END=115248001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1512:0,110,255:39,0 chr1 115248038 . T . PASS END=115248038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 115248085 . C . PASS END=115248085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 115248097 . T . PASS END=115248097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr1 115248126 . C . PASS END=115248126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 115248169 . G . PASS END=115248169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 115248192 . T . PASS END=115248192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:30,0 chr1 115248202 . A . PASS END=115248202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr1 115248489 . C . PASS END=115248489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 115248527 . G . PASS END=115248527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1488:0,93,255:35,0 chr1 115248537 . C . PASS END=115248537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 115248741 . A . PASS END=115248741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1512:0,120,255:40,0 chr1 115248779 . G . PASS END=115248779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr1 115248801 . T . PASS END=115248801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 115248828 . A . PASS END=115248828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 115248870 . A . PASS END=115248870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:38:0,66,990:0,114,255:22,0 chr1 115249059 . G . PASS END=115249059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 115249072 . C . PASS END=115249072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 115249086 . G . PASS END=115249086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 115249144 . T . PASS END=115249144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr1 115249206 . T . PASS END=115249206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 115249249 . T . PASS END=115249249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 115249333 . C . PASS END=115249333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 115249610 . G . PASS END=115249610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 115249651 . C . PASS END=115249651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 115249779 . G . PASS END=115249779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 115249941 . T . PASS END=115249941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:24,0 chr1 115250064 . G . PASS END=115250064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 115250179 . G . PASS END=115250179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr1 115250371 . T . PASS END=115250371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,7:75:92:75:0,92,1679:0,92,255:40,0 chr1 115250375 . C . PASS END=115250375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 115250604 . T . PASS END=115250604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 115251156 . T . PASS END=115251275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:36:0,93,1395:0,108,255:40,1 chr1 115252190 . C . PASS END=115252344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:31:0,84,1260:0,93,255:40,0 chr1 115252345 . G . PASS END=115252345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 115252346 . C . PASS END=115252347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 115252348 . C . PASS END=115252349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 115252352 . A . PASS END=115252352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 115252357 . C . PASS END=115252357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 115256421 . C . PASS END=115256559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:38:0,90,1368:0,90,255:40,0 chr1 115256560 . A . PASS END=115256560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1324:0,48,255:34,0 chr1 115256561 . G . PASS END=115256572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1268:0,81,255:38,0 chr1 115256573 . T . PASS END=115256573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1207:0,66,255:32,0 chr1 115256574 . A . PASS END=115256574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 115256575 . T . PASS END=115256575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1186:0,42,255:31,0 chr1 115256576 . A . PASS END=115256576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 115256577 . A . PASS END=115256577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1148:0,64,255:31,0 chr1 115256578 . C . PASS END=115256580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1227:0,102,255:34,0 chr1 115256581 . C . PASS END=115256581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1096:0,55,255:32,0 chr1 115256582 . T . PASS END=115256590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1111:0,85,255:34,0 chr1 115256591 . G . PASS END=115256592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1133:0,63,255:31,0 chr1 115256593 . A . PASS END=115256593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1241:0,86,255:31,0 chr1 115256594 . A . PASS END=115256594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1004:0,68,255:29,0 chr1 115256595 . G . PASS END=115256599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1127:0,85,255:31,0 chr1 115256605 . G . PASS END=115256605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 115256607 . T . PASS END=115256607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 115258671 . C . PASS END=115258781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,161,255:40,2 chr1 115259367 . C . PASS END=115259367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 115259393 . G . PASS END=115259393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 115259440 . C . PASS END=115259440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 115259470 . T . PASS END=115259470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 115259503 . C . PASS END=115259503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr1 115259506 . G . PASS END=115259506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,170:4,0 chr1 115259768 . T . PASS END=115259768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 115260790 . T . PASS END=115260813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:62:0,120,1800:0,182,255:40,0 chr1 115260814 . G . PASS END=115260837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:61:0,120,1800:0,148,255:40,0 chr1 115261234 . C . PASS END=115261236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 115261237 . T . PASS END=115261237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:21,0 chr1 115261238 . G . PASS END=115261240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 115261241 . T . PASS END=115261241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 115261242 . T . PASS END=115261247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 115261248 . G . PASS END=115261248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 115261249 . T . PASS END=115261254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,923:0,75,255:25,0 chr1 115261255 . T . PASS END=115261255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 115261256 . G . PASS END=115261268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:25,0 chr1 115261269 . C . PASS END=115261269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 115261270 . C . PASS END=115261270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:26,0 chr1 115261271 . A . PASS END=115261280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:28,0 chr1 115261281 . G . PASS END=115261283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 115261284 . C . PASS END=115261284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 115261285 . A . PASS END=115261285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 115261286 . C . PASS END=115261286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 115261287 . T . PASS END=115261288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 115261289 . G . PASS END=115261290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 115261291 . A . PASS END=115261332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,899:0,67,255:25,0 chr1 115261333 . A . PASS END=115261333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 115261334 . G . PASS END=115261349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,815:0,66,255:22,0 chr1 115261350 . C . PASS END=115261354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:16,0 chr1 115261355 . T . PASS END=115261355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:15,0 chr1 115261356 . T . PASS END=115261360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:15,0 chr1 115261361 . C . PASS END=115261361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:14,0 chr1 115261362 . C . PASS END=115261362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 115261363 . C . PASS END=115261366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr1 115262200 . C . PASS END=115262363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:90:30:0,90,1088:0,90,255:40,0 chr1 115263160 . C . PASS END=115263161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 115263162 . G . PASS END=115263162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:24,0 chr1 115263163 . A . PASS END=115263170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr1 115263171 . C . PASS END=115263174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1033:0,81,255:29,0 chr1 115263175 . T . PASS END=115263175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 115263176 . T . PASS END=115263338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:30:0,90,1125:0,90,255:40,0 chr1 115266504 . C . PASS END=115266623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:38:0,90,1620:0,90,255:40,0 chr1 115267842 . C . PASS END=115267954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:37:0,84,1260:0,95,255:40,0 chr1 115268832 . C . PASS END=115269007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:35:0,87,1256:0,87,255:40,0 chr1 115269604 . C . PASS END=115269711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,105,1575:0,109,255:40,0 chr1 115272879 . C . PASS END=115273032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1260:0,81,255:40,0 chr1 115273033 . G . PASS END=115273034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:25,0 chr1 115273035 . G . PASS END=115273043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,97,255:29,0 chr1 115273129 . A . PASS END=115273269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:43:0,115,1800:0,115,255:40,0 chr1 115275225 . C . PASS END=115275417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:34:0,86,1219:0,86,255:40,0 chr1 115275418 . C . PASS END=115275418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:31,0 chr1 115275419 . G . PASS END=115275432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,81,255:33,0 chr1 115275433 . T . PASS END=115275437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 115276353 . C . PASS END=115276478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:63:0,120,1800:0,129,255:40,0 chr1 115276610 . A . PASS END=115276738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,102,1621:0,102,255:40,0 chr1 115277063 . C . PASS END=115277144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,129,255:40,1 chr1 115279379 . T . PASS END=115279476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:52:0,120,1800:0,156,255:40,0 chr1 115280092 . C . PASS END=115280148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:40:0,105,1475:0,105,255:40,0 chr1 115280149 . T . PASS END=115280184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:74:0,120,1800:0,156,255:40,0 chr1 115280584 . T . PASS END=115280682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,110,1438:0,110,255:40,0 chr1 115280683 . T . PASS END=115280683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:37,0 chr1 115280684 . T . PASS END=115280693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:39:0,84,1250:0,84,255:39,0 chr1 115282313 . C . PASS END=115282313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 115282314 . T . PASS END=115282314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 115282315 . C . PASS END=115282333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,892:0,65,255:26,0 chr1 115282334 . G . PASS END=115282488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:28:0,81,1055:0,83,255:40,0 chr1 115282489 . A . PASS END=115282489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr1 115282490 . G . PASS END=115282490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 115282491 . A . PASS END=115282511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:24:0,65,969:0,65,255:25,0 chr1 115284148 . A . PASS END=115284285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,120,1800:0,131,255:40,0 chr1 115316892 . T . PASS END=115316897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,129,255:40,0 chr1 115316898 . G . PASS END=115316993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:54:0,120,1800:0,137,255:40,0 chr1 115318967 . C . PASS END=115319072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:33:0,81,1215:0,83,255:40,0 chr1 115319073 . T . PASS END=115319080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:32:0,75,1125:0,83,255:26,0 chr1 115321763 . T . PASS END=115321766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,925:0,65,255:26,0 chr1 115321767 . G . PASS END=115321767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 115321768 . A . PASS END=115321768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:32,0 chr1 115321769 . G . PASS END=115321786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1216:0,83,255:36,0 chr1 115321787 . C . PASS END=115321787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 115321788 . A . PASS END=115321905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:36:0,92,1310:0,92,255:40,0 chr1 115322731 . C . PASS END=115322797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:92:35:0,92,1272:0,92,255:40,2 chr1 115322798 . T . PASS END=115322798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:76:54:0,76,1847:0,76,255:40,2 chr1 115322799 . T . PASS END=115322828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,118,1570:0,118,255:40,0 chr1 115322829 . T . PASS END=115322829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1244:0,65,255:38,0 chr1 115322830 . C . PASS END=115322836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,116,1544:0,116,255:40,0 chr1 115323058 . C . PASS END=115323088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:18,0 chr1 115323089 . C . PASS END=115323091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 115323092 . G . PASS END=115323092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 115323093 . C . PASS END=115323094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 115323095 . T . PASS END=115323096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 115323097 . C . PASS END=115323098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 115323099 . G . PASS END=115323099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 115323100 . C . PASS END=115323105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 115323106 . T . PASS END=115323132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:18:0,50,706:0,50,255:19,0 chr1 115323133 . C . PASS END=115323162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr1 115323163 . G . PASS END=115323164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 115323165 . G . PASS END=115323167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 115323168 . C . PASS END=115323184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 115323185 . A . PASS END=115323186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 115323187 . C . PASS END=115323189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 115323190 . C . PASS END=115323190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 115323191 . T . PASS END=115323195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 115323196 . G . PASS END=115323226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,969:0,72,255:25,0 chr1 115323227 . A . PASS END=115323227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 115323228 . T . PASS END=115323228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 115398086 . A . PASS END=115398090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 115398091 . A . PASS END=115398149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1144:0,83,255:40,0 chr1 115398150 . C . PASS END=115398150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr1 115398151 . G . PASS END=115398191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1149:0,80,255:37,0 chr1 115398192 . A . PASS END=115398192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:27,0 chr1 115398193 . G . PASS END=115398193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 115399194 . A . PASS END=115399278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:79:0,120,1800:0,209,255:40,0 chr1 115399853 . A . PASS END=115399896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:75:0,120,1800:0,148,255:40,0 chr1 115400065 . G . PASS END=115400118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,179,255:40,0 chr1 115401168 . A . PASS END=115401173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,111,1328:0,111,255:39,0 chr1 115401174 . G . PASS END=115401332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:39:0,117,1391:0,117,255:40,0 chr1 115402364 . T . PASS END=115402431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:72:0,120,1800:0,201,255:40,0 chr1 115403357 . G . PASS END=115403407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,116,1576:0,116,255:40,0 chr1 115403408 . A . PASS END=115403408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:52:51:0,52,1190:0,52,255:40,0 chr1 115403409 . T . PASS END=115403430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,114,1682:0,114,255:40,0 chr1 115411491 . A . PASS END=115411495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:97:0,120,1800:0,255,255:40,0 chr1 115413707 . T . PASS END=115413733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:83:0,120,1800:0,175,255:40,0 chr1 115413734 . T . PASS END=115413753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,219,255:40,0 chr1 115417127 . A . PASS END=115417185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:84:0,120,1800:0,216,255:40,0 chr1 115418690 . A . PASS END=115418759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:53:0,120,1800:0,135,255:40,0 chr1 115419358 . T . PASS END=115419431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:63:0,120,1800:0,168,255:40,0 chr1 115420715 . G . PASS END=115420823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:82:0,120,1800:0,215,255:40,0 chr1 115428156 . A . PASS END=115428250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:124,0:124:99:109:0,120,1800:0,255,255:40,0 chr1 115428746 . A . PASS END=115428930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:51:0,120,1800:0,137,255:40,0 chr1 115430247 . A . PASS END=115430314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:92:0,120,1800:0,239,255:40,0 chr1 115438069 . A . PASS END=115438130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,1:120:99:110:0,120,1800:0,255,255:40,0 chr1 115453018 . G . PASS END=115453122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:62:0,117,1755:0,146,255:40,0 chr1 115454100 . A . PASS END=115454203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:80:0,120,1800:0,226,255:40,0 chr1 115455654 . G . PASS END=115455771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:53:0,109,1746:0,109,255:40,0 chr1 115456596 . A . PASS END=115456666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,168,255:40,0 chr1 115466070 . A . PASS END=115466151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:84:0,120,1800:0,252,255:40,0 chr1 115468899 . T . PASS END=115468961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:88:0,120,1800:0,220,255:40,0 chr1 115469122 . A . PASS END=115469184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:99:0,120,1800:0,189,255:40,2 chr1 115486960 . G . PASS END=115487076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:53:0,120,1800:0,124,255:40,0 chr1 115487493 . G . PASS END=115487511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,187,255:40,0 chr1 115487512 . T . PASS END=115487603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:69:0,120,1800:0,191,255:40,0 chr1 115488910 . C . PASS END=115489002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,168,255:40,0 chr1 115489867 . G . PASS END=115489941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:59:0,120,1800:0,176,255:40,0 chr1 115492677 . G . PASS END=115492718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,165,255:40,0 chr1 115520178 . G . PASS END=115520237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:102:0,120,1800:0,255,255:40,0 chr1 115523957 . A . PASS END=115524133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:93:35:0,93,1395:0,97,255:40,0 chr1 115527346 . G . PASS END=115527489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:82:0,120,1800:0,210,255:40,4 chr1 115537319 . A . PASS END=115537408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:84:44:0,84,1349:0,84,255:40,0 chr1 115537503 . G . PASS END=115537557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:65:0,120,1800:0,181,255:40,0 chr1 115537558 . A . PASS END=115537599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:63:0,120,1800:0,176,255:40,0 chr1 115537600 . G . LowGQ END=115537601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,7:63:0:63:0,0,1589:36,0,255:40,12 chr1 115537602 . A . PASS END=115537640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,150,255:40,0 chr1 115575984 . A . PASS END=115575985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr1 115575986 . G . PASS END=115576022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:50:0,120,1800:0,143,255:40,0 chr1 115576023 . A G, 247.25 PASS DP=67;MQ=249.80;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,36,0:0,31,0:197:285,200,0,2469,200,2469:255,201,0:0,0:2.4725e+02,1.9725e+02,0.0000e+00,4.5000e+02,2.3202e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,30:0,0,36,31 chr1 115576024 . C . PASS END=115576060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,182,255:40,0 chr1 115576061 . G . PASS END=115576135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:33:0,84,1260:0,99,255:40,0 chr1 115576136 . T . PASS END=115576136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:25,0 chr1 115576137 . A . PASS END=115576137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 115576138 . T . PASS END=115576138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:26,0 chr1 115576139 . G . PASS END=115576139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 115576140 . A . PASS END=115576140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 115576141 . C . PASS END=115576142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 115576143 . C . PASS END=115576145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:21,0 chr1 115576150 . G . PASS END=115576150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:30:0,54,810:0,90,255:18,0 chr1 115576567 . A . PASS END=115576848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:52:0,120,1800:0,134,255:40,0 chr1 115576912 . T . PASS END=115576912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 115593111 . T . PASS END=115593176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,107,1488:0,107,255:40,0 chr1 115596000 . C . PASS END=115596083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:45:0,111,1665:0,128,255:40,0 chr1 115600158 . C . PASS END=115600229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,113,1574:0,113,255:40,0 chr1 115601504 . T . PASS END=115601577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:37:0,104,1364:0,104,255:40,0 chr1 115601578 . A . PASS END=115601602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,105,1575:0,120,255:40,0 chr1 115603085 . T . PASS END=115603159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:68:0,120,1800:0,163,255:40,0 chr1 115604756 . T . PASS END=115604756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:49:46:0,49,1346:0,49,255:40,0 chr1 115604757 . G . PASS END=115604763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:88:46:0,88,1415:0,88,255:40,0 chr1 115604764 . G . PASS END=115604764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:60:47:0,60,1385:0,60,255:40,0 chr1 115604765 . C . PASS END=115604770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 115604771 . T . PASS END=115604771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:61:50:0,61,1517:0,61,255:40,0 chr1 115604772 . T . PASS END=115604853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,108,1543:0,108,255:40,0 chr1 115615526 . C . PASS END=115615528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 115615529 . C . PASS END=115615529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,901:0,43,255:27,0 chr1 115615530 . A . PASS END=115615532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1157:0,82,255:32,0 chr1 115615533 . G . PASS END=115615533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1003:0,52,255:30,0 chr1 115615534 . A . PASS END=115615538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1181:0,99,255:33,0 chr1 115615539 . C . PASS END=115615539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:31,0 chr1 115615540 . T . PASS END=115615540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:33,0 chr1 115615541 . C . PASS END=115615541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,978:0,35,255:30,0 chr1 115615542 . T . PASS END=115615545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1109:0,82,255:33,0 chr1 115615546 . G . PASS END=115615546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 115615547 . A . PASS END=115615547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:32,0 chr1 115615548 . C . PASS END=115615548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:13:34:0,13,931:0,13,255:30,0 chr1 115615549 . T . PASS END=115615551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1205:0,102,255:34,0 chr1 115615552 . T . PASS END=115615555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1119:0,85,255:34,0 chr1 115615556 . C . PASS END=115615556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,988:0,52,255:31,0 chr1 115615557 . T . PASS END=115615557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1333:0,105,255:35,0 chr1 115615558 . G . PASS END=115615558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,6:38:14:38:0,14,1029:0,14,255:30,0 chr1 115615559 . A . PASS END=115615562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:38:0,80,1162:0,80,255:36,0 chr1 115615563 . T . PASS END=115615563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:47:38:0,47,1094:0,47,255:32,0 chr1 115615564 . A . PASS END=115615568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,100,1342:0,100,255:40,0 chr1 115615569 . C . PASS END=115615569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:22:40:0,22,1052:0,22,255:35,0 chr1 115615570 . T . PASS END=115615583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:41:0,93,1347:0,93,255:40,1 chr1 115615584 . G . PASS END=115615584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1205:0,59,255:36,0 chr1 115615585 . A . PASS END=115615588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,109,1415:0,109,255:40,0 chr1 115615589 . G . LowGQ END=115615589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,7:42:0:42:0,0,1003:35,0,255:34,0 chr1 115615590 . A . PASS END=115615594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1294:0,106,255:40,0 chr1 115615595 . A . PASS END=115615595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1295:0,51,255:37,0 chr1 115615596 . T . PASS END=115615596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1321:0,90,255:37,0 chr1 115615597 . A . PASS END=115615597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:42:41:0,42,1130:0,42,255:35,0 chr1 115615598 . G . PASS END=115615598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1396:0,90,255:37,0 chr1 115615599 . T . PASS END=115615599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,7:41:7:41:0,7,1096:0,7,255:32,0 chr1 115615600 . C . PASS END=115615600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 115615601 . C . PASS END=115615601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1213:0,73,255:36,0 chr1 115615602 . A . PASS END=115615604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:39,0 chr1 115615605 . A . PASS END=115615605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1124:0,70,255:33,0 chr1 115615606 . G . PASS END=115615608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:39:0,83,1207:0,83,255:36,0 chr1 115615609 . A . PASS END=115615609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1166:0,67,255:31,0 chr1 115615610 . T . PASS END=115615611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 115615612 . A . PASS END=115615612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1090:0,67,255:31,0 chr1 115615613 . C . PASS END=115615619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1092:0,91,255:34,0 chr1 115615620 . T . PASS END=115615620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,907:0,41,255:30,0 chr1 115615621 . C . PASS END=115615621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 115615622 . C . PASS END=115615622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1116:0,77,255:32,0 chr1 115615623 . A . PASS END=115615623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,107,255:33,0 chr1 115615624 . G . PASS END=115615624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1042:0,58,255:28,0 chr1 115615625 . C . PASS END=115615626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1130:0,91,255:32,0 chr1 115615627 . A . PASS END=115615627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,963:0,74,255:32,0 chr1 115615628 . G . PASS END=115615628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1197:0,91,255:33,0 chr1 115631985 . C . PASS END=115632012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr1 115632013 . A . PASS END=115632013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 115632014 . G . PASS END=115632018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 115632019 . T . PASS END=115632019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 115632020 . T . PASS END=115632043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,592:0,45,255:17,0 chr1 115632044 . A . PASS END=115632053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 115828571 . A . PASS END=115828571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr1 115828691 . T . PASS END=115829128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1045:0,85,255:40,0 chr1 115829129 . T . PASS END=115829129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr1 115829130 . T . PASS END=115829131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:27,0 chr1 115829132 . A . PASS END=115829142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,77,255:26,0 chr1 115829143 . G . PASS END=115829143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:19,0 chr1 115829144 . G . PASS END=115829144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,84,255:18,0 chr1 115829145 . G . PASS END=115829165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 115829166 . G . PASS END=115829170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 115829171 . G . PASS END=115829171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 115829172 . A . PASS END=115829177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 115829178 . C . PASS END=115829178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 115829179 . G . PASS END=115829181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 115829182 . T . PASS END=115829197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,976:0,68,255:26,0 chr1 115829198 . G . PASS END=115829202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 115829203 . C . PASS END=115829204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 115829205 . G . PASS END=115829209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1163:0,80,255:28,0 chr1 115829210 . G . PASS END=115829210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr1 115829211 . T . PASS END=115829211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 115829212 . T . PASS END=115829212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 115829213 . G . PASS END=115829213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 115829214 . C . PASS END=115829214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:27,0 chr1 115829215 . G . PASS END=115829217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 115829218 . T . PASS END=115829220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 115829221 . G . PASS END=115829221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 115829222 . C . PASS END=115829222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:28,0 chr1 115829223 . C . PASS END=115829229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 115829230 . C . PASS END=115829230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 115829231 . G . PASS END=115829231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 115829232 . C . PASS END=115829232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:28,0 chr1 115829233 . G . PASS END=115829234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:30,0 chr1 115829235 . G . PASS END=115829235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 115829236 . C . PASS END=115829299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1164:0,81,255:40,0 chr1 115829300 . T . PASS END=115829300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1442:0,77,255:40,0 chr1 115829301 . T . PASS END=115829325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,99,1472:0,99,255:40,0 chr1 115829326 . T . PASS END=115829362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,103,1539:0,103,255:40,0 chr1 115829363 . C T, 50.00 PASS DP=62;MQ=250.00;MQRankSum=6.726;ReadPosRankSum=4.208;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,34,0:0.548,0.000:62:11,14,0:17,20,0:48:85,0,49,1114,1001,2115:255,0,255:27,0:5.0000e+01,6.8857e-05,5.2335e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,18,16:15,13,16,18 chr1 115829364 . G . PASS END=115829400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,167,255:40,0 chr1 115829401 . A . PASS END=115829428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:45:0,114,1690:0,114,255:40,0 chr1 115836234 . C . PASS END=115836234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 115836248 . C . PASS END=115836371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1174:0,81,255:40,0 chr1 115837709 . A G, 50.00 PASS DP=67;MQ=250.00;MQRankSum=6.992;ReadPosRankSum=2.843;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,37,0:0.552,0.000:67:16,20,0:14,17,0:48:85,0,49,1307,1057,2364:255,0,255:30,0:5.0000e+01,7.0410e-05,5.2079e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,17,20:17,13,18,19 chr1 115843018 . T . PASS END=115843046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,187,255:40,0 chr1 116184596 . A . PASS END=116184596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 116184674 . C . PASS END=116184674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,78:1,0 chr1 116184700 . G . PASS END=116184700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 116193920 . G . PASS END=116193920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 116194011 . C . PASS END=116194011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 116194035 . A . PASS END=116194105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,155,255:40,0 chr1 116202262 . G . PASS END=116202394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:38:0,97,1343:0,97,255:40,0 chr1 116206282 . G . PASS END=116206804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:29:0,81,1194:0,86,255:40,0 chr1 116206805 . T . PASS END=116206806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 116206807 . A . PASS END=116206810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 116206811 . A . PASS END=116206811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 116206812 . G . PASS END=116206815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 116206816 . C . PASS END=116206817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 116206818 . G . PASS END=116206819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:27,0 chr1 116206820 . C . PASS END=116206824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1047:0,74,255:25,0 chr1 116206825 . T . PASS END=116206825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,898:0,40,255:22,0 chr1 116206826 . T . PASS END=116206827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr1 116206828 . A . PASS END=116206828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:22,0 chr1 116206829 . C . PASS END=116206847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr1 116206848 . C . PASS END=116206889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,45,255:19,0 chr1 116206898 . C . PASS END=116206898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 116224985 . T . PASS END=116225118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:40:0,102,1582:0,102,255:40,0 chr1 116226565 . G . PASS END=116226567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 116226568 . C . PASS END=116226574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:24,0 chr1 116226575 . C . PASS END=116226697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,994:0,81,255:40,0 chr1 116227914 . G . PASS END=116228013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:34:0,96,1267:0,102,255:40,0 chr1 116228014 . G . PASS END=116228014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 116228015 . C . PASS END=116228148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1260:0,98,255:40,0 chr1 116233740 . G . PASS END=116233741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 116233742 . C . PASS END=116233742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 116233743 . T . PASS END=116233743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 116233744 . T . PASS END=116233761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,759:0,63,255:26,0 chr1 116233762 . G . PASS END=116233979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:31:0,80,1133:0,80,255:40,0 chr1 116233980 . C . PASS END=116234000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,136,255:40,0 chr1 116234025 . A . LowGQ END=116234025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,9:47:0:47:0,0,1080:154,0,255:39,6 chr1 116234088 . A . PASS END=116234088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 116234229 . T . PASS END=116234229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 116234234 . A . PASS END=116234234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:22,0 chr1 116234301 . G . PASS END=116234301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 116234340 . C . PASS END=116234340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 116234483 . A . PASS END=116234483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 116234634 . T . PASS END=116234634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 116234758 . G . PASS END=116234758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 116234801 . A . PASS END=116234801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 116234922 . C . PASS END=116234922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 116234929 . G . PASS END=116234929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 116234931 . C . PASS END=116234931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 116235042 . C . PASS END=116235043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 116235402 . C . PASS END=116235402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 116235456 . T . PASS END=116235456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 116235483 . C . PASS END=116235483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 116235492 . G . PASS END=116235492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 116235516 . A . PASS END=116235516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 116235545 . A . PASS END=116235545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 116235638 . A . PASS END=116235638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 116235748 . C . PASS END=116235749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 116235970 . C . PASS END=116235970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 116236009 . C . PASS END=116236009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 116236099 . G . PASS END=116236099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 116236107 . A . PASS END=116236107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 116236116 . A . PASS END=116236116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 116236329 . C . PASS END=116236329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 116236336 . A . PASS END=116236336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 116236460 . C . PASS END=116236460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 116236504 . A . PASS END=116236504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 116236541 . G . PASS END=116236542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,211,255:40,0 chr1 116236592 . T . PASS END=116236592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 116236695 . C . PASS END=116236695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:64:0,120,1800:0,159,255:40,0 chr1 116236708 . G . PASS END=116236708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr1 116236917 . G . PASS END=116236917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 116236961 . T . PASS END=116236961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 116236992 . G . PASS END=116236992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 116237049 . G . PASS END=116237049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 116237123 . A . PASS END=116237123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 116237150 . T . PASS END=116237150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1286:0,102,255:34,0 chr1 116237267 . C . PASS END=116237267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 116237273 . A . PASS END=116237273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 116237289 . A . PASS END=116237290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 116237406 . G . PASS END=116237406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 116237409 . T . PASS END=116237409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,154,255:40,0 chr1 116237559 . G . PASS END=116237559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 116237598 . A . PASS END=116237598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 116237608 . C . PASS END=116237608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 116237666 . G . PASS END=116237666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 116237671 . T . PASS END=116237671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:32,0 chr1 116237708 . C . PASS END=116237708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 116237720 . T . PASS END=116237720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 116237742 . A . PASS END=116237742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1381:0,103,255:37,0 chr1 116237844 . A . PASS END=116237844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 116238041 . T . PASS END=116238041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr1 116238209 . A . PASS END=116238209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1227:0,99,255:33,0 chr1 116238254 . A . PASS END=116238254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 116238272 . T . PASS END=116238272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 116238347 . C . PASS END=116238347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 116238463 . A . PASS END=116238463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 116238676 . C . PASS END=116238676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 116238731 . C . PASS END=116238731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 116238800 . C . PASS END=116238800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 116238840 . T . PASS END=116238840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 116238846 . G . PASS END=116238846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr1 116239022 . T . PASS END=116239022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 116239036 . G . PASS END=116239036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 116239066 . C . PASS END=116239066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 116239132 . G . PASS END=116239132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 116239267 . G . PASS END=116239267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 116239351 . G . PASS END=116239351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 116239413 . A . PASS END=116239413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 116239440 . G . PASS END=116239440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 116239466 . G . PASS END=116239466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 116239637 . C . PASS END=116239637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 116239808 . C . PASS END=116239808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 116239862 . G . PASS END=116239862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 116239929 . G . PASS END=116239929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 116239993 . C . PASS END=116239993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 116240084 . C . PASS END=116240084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 116240128 . T . PASS END=116240128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 116240360 . C . PASS END=116240360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 116240474 . T . PASS END=116240474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 116240602 . C . PASS END=116240602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 116240640 . G . PASS END=116240640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,108,1620:0,129,255:36,0 chr1 116240681 . A . PASS END=116240681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1373:0,98,255:35,0 chr1 116240687 . A . PASS END=116240687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 116240794 . C . PASS END=116240794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 116240837 . A . PASS END=116240837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 116242655 . T . PASS END=116242655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr1 116242671 . A . PASS END=116242671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:79:0,120,1800:0,182,255:40,0 chr1 116242810 . T . PASS END=116242810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:46:0,84,1260:0,122,255:28,0 chr1 116242839 . T . PASS END=116242839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:45:44:0,45,675:0,132,255:15,0 chr1 116242844 . ATT AT,A,ATTT, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.147;ReadPosRankSum=-0.241;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,20,5,1,0:0.500,0.125,0.025,0.000:40:7,12,4,1,0:7,8,1,0,0:31:60,0,28,94,82,142,183,81,238,141,108,64,188,218,167:255,0,255:14,37:5.0003e+01,3.3134e-03,3.1234e+01,9.4306e+01,9.2273e+01,1.4527e+02,1.8269e+02,9.1298e+01,2.4827e+02,1.4430e+02,1.3242e+02,9.8428e+01,2.2302e+02,2.5302e+02,1.9437e+02:0.00,10.00,13.00,10.00,20.00,13.00,10.00,20.00,20.00,13.00,34.77,44.77,44.77,44.77,37.77:7,7,12,14:6,8,9,17 chr1 116242933 . G . PASS END=116242933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 116243207 . G . PASS END=116243207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 116243226 . C . PASS END=116243226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 116243288 . A . PASS END=116243288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 116243359 . C . PASS END=116243359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 116243405 . G . PASS END=116243405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 116243530 . T . PASS END=116243530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 116243687 . A . PASS END=116243687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr1 116243824 . C . PASS END=116243824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 116243862 . C . PASS END=116243876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,2:111:99:108:0,120,1800:0,255,255:40,1 chr1 116243877 . G A, 48.81 PASS DP=113;MQ=250.00;MQRankSum=9.102;ReadPosRankSum=5.211;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:63,50,0:0.442,0.000:113:31,31,0:32,19,0:47:84,0,50,1707,2242,3949:255,0,255:40,1:4.8811e+01,7.8953e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:38,25,31,19:28,35,26,24 chr1 116243878 . T . PASS END=116243914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:126,1:127:99:115:0,120,1800:0,255,255:40,2 chr1 116243915 . C . PASS END=116244048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:82:0,120,1800:0,230,255:40,1 chr1 116244050 . G . PASS END=116244050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 116245539 . C . PASS END=116245539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1504:0,117,255:39,0 chr1 116245542 . A . PASS END=116245617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,100,1458:0,100,255:40,0 chr1 116247812 . C . PASS END=116247913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1233:0,86,255:40,0 chr1 116247923 . G . PASS END=116247923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 116260461 . C . PASS END=116260494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,158,255:40,0 chr1 116260495 . G . PASS END=116260515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,147,255:40,0 chr1 116268126 . T . PASS END=116268126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 116268129 . C . PASS END=116268164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:81:77:0,81,1215:0,91,255:40,0 chr1 116268165 . T . PASS END=116268173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:60:59:0,60,900:0,78,255:24,0 chr1 116268174 . T . PASS END=116268174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,3:58:57:58:0,57,855:0,102,255:17,0 chr1 116268177 . G . PASS END=116268177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:54:58:0,54,810:0,54,255:16,5 chr1 116269613 . C . PASS END=116269618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,114,1315:0,114,255:40,0 chr1 116269619 . T C,G, 50.00 PASS DP=45;MQ=249.91;FractionInformativeReads=0.978 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,26,0,0:0.591,0.000,0.000:44:13,16,0,0:5,10,0,0:47:85,0,47,836,586,671,843,586,1422,1429:255,0,255:18,0:5.0000e+01,8.3871e-05,5.0322e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:11,7,13,13:10,8,17,9 chr1 116269620 . G . PASS END=116269656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:97:45:0,97,1386:0,97,255:40,0 chr1 116269657 . A . PASS END=116269735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,102,1421:0,102,255:40,0 chr1 116269736 . T . PASS END=116269736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:36,0 chr1 116269737 . T . PASS END=116269743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1319:0,94,255:36,0 chr1 116275521 . C . PASS END=116275595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:42:0,96,1435:0,96,255:40,0 chr1 116275601 . G . PASS END=116275601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 116275607 . A . PASS END=116275607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 116280845 . A . PASS END=116280956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,99,1684:0,99,255:40,0 chr1 116280970 . C . PASS END=116280971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:46:0,90,1350:0,138,255:36,0 chr1 116283349 . A . PASS END=116283449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:72:0,120,1800:0,186,255:40,0 chr1 116287449 . C . PASS END=116287471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:95:37:0,95,1325:0,95,255:38,0 chr1 116287472 . T . PASS END=116287472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:36,0 chr1 116287473 . C . PASS END=116287516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1227:0,88,255:40,0 chr1 116287517 . A . PASS END=116287533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:26,0 chr1 116287535 . T . PASS END=116287535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 116310926 . T . PASS END=116310927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 116310929 . C . PASS END=116310929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 116310930 . T . PASS END=116310966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:55:0,120,1800:0,133,255:40,0 chr1 116310967 . T C, 49.90 PASS DP=64;MQ=250.00;MQRankSum=6.865;ReadPosRankSum=4.299;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,31,0:0.484,0.000:64:16,17,0:17,14,0:48:85,0,50,1063,1180,2243:255,0,255:31,0:4.9905e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,17,20,11:15,18,14,17 chr1 116310968 . G . PASS END=116311004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,183,255:40,0 chr1 116311005 . C . PASS END=116311153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:43:0,106,1528:0,106,255:40,0 chr1 116311154 . T . PASS END=116311154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1283:0,65,255:39,0 chr1 116311155 . C . PASS END=116311160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1574:0,113,255:40,0 chr1 116311161 . A . PASS END=116311162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 116311267 . T . PASS END=116311267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:98:43:0,98,1521:0,98,255:39,0 chr1 116380586 . C . PASS END=116380591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:19,0 chr1 116380592 . G . PASS END=116380610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:26,0 chr1 116380611 . T . PASS END=116380612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 116380613 . G . PASS END=116380614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 116380615 . A . PASS END=116380624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 116380625 . G . PASS END=116380625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 116380626 . A . PASS END=116380638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 116380639 . G . PASS END=116380640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 116380641 . A . PASS END=116380644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 116380645 . C . PASS END=116380645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 116380646 . G . PASS END=116380660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1109:0,80,255:31,0 chr1 116380661 . C . PASS END=116380663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 116380664 . G . PASS END=116380665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 116380666 . C . PASS END=116380669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 116380670 . G . PASS END=116380680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1092:0,84,255:30,0 chr1 116380681 . G . PASS END=116380681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 116380682 . C . PASS END=116380703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1059:0,90,255:32,0 chr1 116380704 . A . PASS END=116380704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 116380705 . A . PASS END=116380710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1081:0,93,255:31,0 chr1 116380711 . A . PASS END=116380711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr1 116380712 . G . PASS END=116380777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1200:0,83,255:38,0 chr1 116380778 . C . PASS END=116380779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:30,0 chr1 116380780 . G . PASS END=116380787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:32,0 chr1 116380788 . C . PASS END=116380788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:31,0 chr1 116380789 . G . PASS END=116380789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 116380790 . C . PASS END=116380790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr1 116380791 . T . PASS END=116380826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1203:0,81,255:37,0 chr1 116380827 . A . PASS END=116380827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:31,0 chr1 116380828 . G . PASS END=116380876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1101:0,80,255:33,0 chr1 116380877 . C . PASS END=116380878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1072:0,76,255:31,0 chr1 116380879 . C . PASS END=116380879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 116380880 . C . PASS END=116380880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 116380881 . A . PASS END=116380882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1033:0,66,255:26,0 chr1 116380883 . G . PASS END=116380886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,82,255:27,0 chr1 116380887 . G . PASS END=116380888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:26,0 chr1 116380889 . C . PASS END=116380889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 116380890 . A . PASS END=116380890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 116380891 . C . PASS END=116380891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 116380892 . G . PASS END=116380892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1055:0,41,255:26,0 chr1 116380893 . C . PASS END=116380897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:30,0 chr1 116380898 . G . PASS END=116380917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,1063:0,63,255:27,0 chr1 116380918 . C . PASS END=116380918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:24,0 chr1 116380919 . G . PASS END=116380944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,63,255:25,0 chr1 116380945 . C . PASS END=116380972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,657:0,41,255:19,0 chr1 116380973 . T . PASS END=116380974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 116380975 . G . PASS END=116380979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 116380980 . G . PASS END=116380980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:14,0 chr1 116380981 . G . PASS END=116380986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:15,0 chr1 116380987 . G . PASS END=116380987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 116380988 . C . PASS END=116380993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 116381021 . T . PASS END=116381058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 116381059 . A . PASS END=116381059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 116381060 . T . PASS END=116381063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 116381064 . T . PASS END=116381064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 116381065 . G . PASS END=116381082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:12,0 chr1 116381083 . G . PASS END=116381083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 116381084 . G . PASS END=116381087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 116381088 . T . PASS END=116381100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 116381101 . G . PASS END=116381106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 116381107 . C . PASS END=116381107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:10,0 chr1 116381108 . G . PASS END=116381113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 116381114 . C . PASS END=116381121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,22,255:9,0 chr1 116381122 . C . PASS END=116381158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,374:0,33,255:13,0 chr1 116381159 . G . PASS END=116381220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:16,0 chr1 116381221 . T . PASS END=116381221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 116381222 . T . PASS END=116381233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr1 116381234 . C . PASS END=116381234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 116381235 . A . PASS END=116381303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,582:0,41,255:19,0 chr1 116381304 . C . PASS END=116381304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 116381305 . G . PASS END=116381309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 116381310 . C . PASS END=116381312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 116381313 . G . PASS END=116381313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 116381314 . T . PASS END=116381314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 116381315 . G . PASS END=116381326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:19,0 chr1 116381327 . G . PASS END=116381352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:23,0 chr1 116381353 . T . PASS END=116381353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 116381354 . G . PASS END=116381362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:71:24:0,71,708:0,71,255:25,0 chr1 116381363 . G . PASS END=116381363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 116381364 . C . PASS END=116381391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,930:0,62,255:25,0 chr1 116381392 . T . PASS END=116381392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 116381393 . C . PASS END=116381402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,876:0,61,255:26,0 chr1 116381403 . C . PASS END=116381403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:25,0 chr1 116381404 . G . PASS END=116381416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,901:0,64,255:26,0 chr1 116381417 . C . PASS END=116381417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 116381418 . A . PASS END=116381420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 116381421 . G . PASS END=116381421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 116381422 . A . PASS END=116381422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 116381423 . A . PASS END=116381429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,950:0,70,255:26,0 chr1 116381430 . T . PASS END=116381430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:25,0 chr1 116381431 . G . PASS END=116381434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 116381435 . T . PASS END=116381438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 116381439 . A . PASS END=116381456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:26,0 chr1 116381457 . G . PASS END=116381458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 116381459 . G A, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=1.256;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,17,0:0.567,0.000:30:6,9,0:7,8,0:48:85,0,49,601,407,1008:255,0,255:12,0:5.0000e+01,7.3776e-05,5.1574e+01,4.5000e+02,4.4251e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,4,10,7:6,7,10,7 chr1 116381460 . G . PASS END=116381473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 116381474 . C . PASS END=116381474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 116381475 . C . PASS END=116381477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 116381478 . G . PASS END=116381478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 116381479 . G . PASS END=116381493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1141:0,90,255:30,0 chr1 116381494 . A . PASS END=116381494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 116381495 . A . PASS END=116381496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 116381497 . C . PASS END=116381505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 116381506 . G . PASS END=116381528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 116381529 . G . PASS END=116381680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:30:0,80,1133:0,80,255:40,1 chr1 116381681 . A . PASS END=116381681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:73:60:0,73,1351:0,73,255:40,0 chr1 116381682 . C . PASS END=116381690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:91:53:0,91,1574:0,91,255:40,0 chr1 116381691 . G . PASS END=116381691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:61:52:0,61,1529:0,61,255:40,0 chr1 116381692 . C . PASS END=116381692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,117,1816:0,117,255:40,0 chr1 116381693 . C . PASS END=116381693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:50:52:0,50,1321:0,50,255:40,0 chr1 116381694 . T . PASS END=116381700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,114,1740:0,114,255:40,0 chr1 116381701 . A . PASS END=116381702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:77:49:0,77,1260:0,77,255:40,0 chr1 116381703 . A . PASS END=116381743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,104,1421:0,104,255:40,0 chr1 116519249 . A . PASS END=116519254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 116519255 . G . PASS END=116519277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1049:0,84,255:29,0 chr1 116519278 . G . PASS END=116519278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 116519279 . G . PASS END=116519317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:32,0 chr1 116519318 . C . PASS END=116519318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 116519319 . T . PASS END=116519327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 116519328 . T . PASS END=116519331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:23,0 chr1 116519332 . G . PASS END=116519335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,84,255:19,0 chr1 116534652 . C . PASS END=116534672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,637:0,51,255:19,0 chr1 116534673 . A . PASS END=116534673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 116534674 . T . PASS END=116534674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 116534675 . C . PASS END=116534691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:25,0 chr1 116534692 . G . PASS END=116534699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 116534700 . C . PASS END=116534701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 116534702 . A . PASS END=116534705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 116534706 . T . PASS END=116534709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 116534710 . A . PASS END=116534711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 116534712 . T . PASS END=116534726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,74,255:26,0 chr1 116534727 . C . PASS END=116534739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 116534740 . A . PASS END=116534740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 116534741 . G . PASS END=116534768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1062:0,84,255:29,0 chr1 116534769 . G . PASS END=116534769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 116534770 . A . PASS END=116534771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 116534772 . C . PASS END=116534775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 116534776 . C . PASS END=116534777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 116534778 . T . PASS END=116534779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:26,0 chr1 116534780 . T . PASS END=116534781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 116534782 . G . PASS END=116534782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 116534783 . G . PASS END=116534795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr1 116534796 . A . PASS END=116534814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,937:0,62,255:26,0 chr1 116534815 . T . PASS END=116534825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 116534826 . G . PASS END=116534829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr1 116534830 . A . PASS END=116534831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 116534832 . T . PASS END=116534851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 116534852 . C T, 46.03 PASS DP=20;MQ=250.00;MQRankSum=3.566;ReadPosRankSum=2.536;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,7,0:0.350,0.000:20:5,5,0:8,2,0:45:81,0,50,250,457,707:211,0,255:12,0:4.6031e+01,1.2995e-04,5.3000e+01,2.5031e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,2,5:8,5,4,3 chr1 116534853 . A . PASS END=116534853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 116534854 . T . PASS END=116534861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 116534862 . G . PASS END=116534863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 116534864 . G . PASS END=116534864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 116562203 . T . PASS END=116562335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:40:0,96,1431:0,96,255:40,0 chr1 116563342 . G . PASS END=116563344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 116563345 . T . PASS END=116563346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 116563347 . G . PASS END=116563355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1072:0,80,255:32,0 chr1 116563356 . A . PASS END=116563356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 116563357 . T . PASS END=116563478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1164:0,89,255:40,0 chr1 116563479 . G . PASS END=116563497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 116563498 . C . PASS END=116563506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 116569514 . G . PASS END=116569526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 116569527 . C . PASS END=116569527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 116569528 . C . PASS END=116569528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 116569529 . T . PASS END=116569529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 116569530 . G C, 140.30 PASS DP=31;MQ=247.37;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:90:178,93,0,1202,93,1202:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,12:0,0,15,16 chr1 116569531 . T . PASS END=116569533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 116569534 . T . PASS END=116569534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr1 116569535 . T . PASS END=116569567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,81,255:36,0 chr1 116569568 . G . PASS END=116569615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1158:0,85,255:40,0 chr1 116569616 . A . PASS END=116569625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,77,255:26,0 chr1 116569626 . G . PASS END=116569626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:22,0 chr1 116569627 . G . PASS END=116569629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 116569630 . T . PASS END=116569643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 116573987 . A . PASS END=116573993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr1 116573994 . C . PASS END=116574016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:19,0 chr1 116574017 . C . PASS END=116574031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,778:0,63,255:25,0 chr1 116574032 . G . PASS END=116574068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1217:0,83,255:33,0 chr1 116574069 . A . PASS END=116574069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:30,0 chr1 116574070 . G . PASS END=116574202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:33:0,83,909:0,83,255:40,0 chr1 116574333 . C . PASS END=116574343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,165,255:40,0 chr1 116574344 . A . PASS END=116574351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,183,255:40,0 chr1 116577808 . G . PASS END=116577943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:31:0,82,925:0,82,255:40,0 chr1 116577944 . A . PASS END=116577948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1097:0,80,255:32,0 chr1 116579924 . G . PASS END=116580009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,102,1731:0,102,255:40,0 chr1 116580684 . C . PASS END=116580685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 116580686 . C . PASS END=116580686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 116580687 . A . PASS END=116580691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 116580692 . A . PASS END=116580694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 116580695 . T . PASS END=116580695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 116580696 . A . PASS END=116580700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 116580701 . A . PASS END=116580701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 116580702 . G . PASS END=116580705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 116580706 . T . PASS END=116580706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 116580707 . T . PASS END=116580718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:30:0,82,1133:0,82,255:34,0 chr1 116580719 . T . PASS END=116580720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr1 116580721 . T . PASS END=116580721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:32,0 chr1 116580722 . G . PASS END=116580751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1156:0,85,255:35,0 chr1 116580752 . G . PASS END=116580752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1105:0,72,255:32,0 chr1 116580753 . T . PASS END=116580755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1119:0,85,255:32,0 chr1 116580756 . G . LowGQ END=116580757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,651:29,0,255:25,0 chr1 116580758 . C . PASS END=116580781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1186:0,86,255:30,0 chr1 116580782 . C . PASS END=116580793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 116581562 . G . PASS END=116581602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,113,1551:0,113,255:40,0 chr1 116605383 . A . PASS END=116605500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1201:0,91,255:40,0 chr1 116605501 . C . PASS END=116605503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1035:0,63,255:24,0 chr1 116607057 . G . PASS END=116607129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:33:0,84,1260:0,99,255:40,0 chr1 116609141 . A . PASS END=116609148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 116609149 . G . PASS END=116609149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 116609150 . C . PASS END=116609172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,872:0,62,255:26,0 chr1 116609173 . C . PASS END=116609185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr1 116609186 . G . PASS END=116609264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1057:0,80,255:33,0 chr1 116609265 . A . PASS END=116609265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 116609266 . G . PASS END=116609266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 116609267 . G . PASS END=116609272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 116609273 . T . PASS END=116609274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 116609275 . G . PASS END=116609275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 116609276 . T . PASS END=116609280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1161:0,80,255:28,0 chr1 116609281 . C . PASS END=116609296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,864:0,61,255:25,0 chr1 116609297 . G . PASS END=116609297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:24,0 chr1 116609298 . C . PASS END=116609312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 116609313 . C . PASS END=116609315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 116609316 . T . PASS END=116609325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:26,0 chr1 116609326 . A . PASS END=116609329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:25:0,48,720:0,62,255:18,0 chr1 116609640 . T . PASS END=116609729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,107,1476:0,107,255:40,0 chr1 116655237 . A . PASS END=116655284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:43:0,96,1496:0,96,255:40,0 chr1 116663553 . G . PASS END=116663693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,117,1607:0,119,255:40,0 chr1 116666687 . G . PASS END=116666703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 116666704 . G . PASS END=116666737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:22,0 chr1 116666738 . G . PASS END=116666738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 116666739 . G . PASS END=116666741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 116666742 . A . PASS END=116666742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 116666743 . C . PASS END=116666749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:23,0 chr1 116666750 . G . PASS END=116666750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 116666751 . C . PASS END=116666766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 116666767 . G . PASS END=116666769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 116666770 . G . PASS END=116666771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:25,0 chr1 116666772 . A . PASS END=116666788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,83,255:28,0 chr1 116666789 . A . PASS END=116666791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 116666792 . A . PASS END=116666809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 116666810 . C . PASS END=116666816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr1 116666817 . C . PASS END=116666859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1033:0,83,255:34,0 chr1 116666860 . G . PASS END=116666860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr1 116666861 . A . PASS END=116666935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1164:0,86,255:36,0 chr1 116666936 . C . PASS END=116666947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:77:29:0,77,1131:0,77,255:26,0 chr1 116666948 . G . PASS END=116666953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 116666954 . G . PASS END=116666965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:22,0 chr1 116666966 . T . PASS END=116666966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 116666967 . G . PASS END=116666967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 116666968 . T . PASS END=116666968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 116666969 . C . PASS END=116666978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 116670087 . G . PASS END=116670243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1215:0,87,255:40,0 chr1 116670244 . A . PASS END=116670261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:25,0 chr1 116670262 . C . PASS END=116670265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr1 116670766 . T . PASS END=116670772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,532:0,40,255:19,0 chr1 116670773 . G . PASS END=116670773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 116670774 . A G, 49.94 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=2.359;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:8,4,0:3,6,0:47:85,0,47,185,185,185:255,0,255:11,0:4.9937e+01,8.7495e-05,5.0000e+01,1.8471e+02,2.1948e+02,1.8772e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,6,3,7:4,7,5,5 chr1 116670775 . T . PASS END=116670779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 116670780 . C . PASS END=116670781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,747:0,50,255:21,0 chr1 116670782 . T . PASS END=116670787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 116670788 . C . PASS END=116670788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 116670789 . C . PASS END=116670791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 116670792 . T . PASS END=116670792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,758:0,47,255:21,0 chr1 116670793 . T . PASS END=116670799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,864:0,61,255:23,0 chr1 116670800 . A . PASS END=116670800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 116670801 . T . PASS END=116670803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 116670804 . C . PASS END=116670804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:24,0 chr1 116670805 . T . PASS END=116670810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 116670811 . C . PASS END=116670811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 116670812 . T . PASS END=116670812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 116670813 . G . PASS END=116670819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 116670820 . C . PASS END=116670820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 116670821 . T . PASS END=116670840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1096:0,83,255:32,0 chr1 116670841 . C . PASS END=116670841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:28,0 chr1 116670842 . T . PASS END=116670842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 116670843 . G . PASS END=116670843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 116670844 . G . PASS END=116670846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1119:0,80,255:31,0 chr1 116670847 . C . PASS END=116670847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,986:0,46,255:28,0 chr1 116670848 . A . PASS END=116670859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1125:0,82,255:32,0 chr1 116670860 . A . PASS END=116670860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1076:0,66,255:30,0 chr1 116670861 . T . PASS END=116670876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1188:0,95,255:33,0 chr1 116670877 . A . PASS END=116670877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:32,0 chr1 116670878 . A . PASS END=116670911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1138:0,83,255:34,0 chr1 116670912 . C . PASS END=116670912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 116670913 . A . PASS END=116670913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 116670914 . T . PASS END=116670915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:27,0 chr1 116670916 . T . PASS END=116670921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1161:0,80,255:29,0 chr1 116670922 . C . PASS END=116670922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 116670923 . C . PASS END=116670923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 116670924 . A . PASS END=116670933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 116670934 . C . PASS END=116670934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:22,0 chr1 116670935 . C . PASS END=116670942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,909:0,64,255:24,0 chr1 116670943 . A . PASS END=116670943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,721:0,39,255:20,0 chr1 116670944 . C . PASS END=116670948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 116670949 . C . PASS END=116670949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 116670950 . A . PASS END=116670957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 116670958 . C . PASS END=116670960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 116675753 . A . PASS END=116675770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,607:0,41,255:19,0 chr1 116675771 . T . PASS END=116675771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 116675772 . G . PASS END=116675776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 116675777 . A . PASS END=116675785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,799:0,63,255:22,0 chr1 116675786 . C . PASS END=116675786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 116675787 . A . PASS END=116675817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:24,0 chr1 116675818 . A . PASS END=116675818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 116675819 . T . PASS END=116675841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,831:0,69,255:26,0 chr1 116675842 . G . PASS END=116675875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr1 116675876 . T . PASS END=116675876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr1 116675877 . A . PASS END=116675884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 116675885 . C . PASS END=116675886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 116675887 . G . PASS END=116675893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 116675894 . A . PASS END=116675894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 116675895 . A . PASS END=116675915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1094:0,87,255:33,0 chr1 116675916 . C . PASS END=116675920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 116675921 . G . PASS END=116675923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 116675924 . C . PASS END=116675925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 116675926 . G . PASS END=116675945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1127:0,90,255:31,0 chr1 116675946 . T . PASS END=116675947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 116675948 . G . PASS END=116675961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:28,0 chr1 116675962 . G . PASS END=116675962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 116675963 . A . PASS END=116675963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,910:0,84,255:28,0 chr1 116675964 . A . PASS END=116675964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 116675965 . C . PASS END=116675965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 116675966 . C . PASS END=116675976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:24,0 chr1 116675977 . C . PASS END=116675986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,759:0,47,255:19,0 chr1 116916134 . A . PASS END=116916134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,640:0,49,255:20,0 chr1 116916135 . T . LowGQ END=116916135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,427:53,0,255:16,0 chr1 116916136 . G . PASS END=116916136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 116916137 . G . PASS END=116916137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 116916138 . G . PASS END=116916140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,707:0,49,255:19,0 chr1 116916141 . A . PASS END=116916141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,564:0,18,255:16,0 chr1 116916142 . G . PASS END=116916145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 116916852 . A . PASS END=116916863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:35:0,94,1258:0,94,255:39,0 chr1 116916872 . T . PASS END=116916872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 116926636 . G . PASS END=116926746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,110,1517:0,110,255:40,0 chr1 116927405 . G . PASS END=116927464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:66:0,120,1800:0,182,255:40,0 chr1 116929910 . G . PASS END=116929916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 116929917 . C . PASS END=116930075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,1108:0,87,255:40,0 chr1 116930076 . T . PASS END=116930076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1364:0,65,255:35,0 chr1 116930077 . C . PASS END=116930097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:35:0,81,1215:0,92,255:35,0 chr1 116930098 . A . PASS END=116930101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,99,255:26,0 chr1 116930102 . C . PASS END=116930103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 116930104 . A . PASS END=116930113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,907:0,64,255:26,0 chr1 116930753 . C . PASS END=116930866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:82:31:0,82,1149:0,82,255:40,0 chr1 116931260 . C . PASS END=116931262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 116931263 . G . PASS END=116931394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,111,1540:0,111,255:40,0 chr1 116931524 . G . PASS END=116931544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,102,1443:0,111,255:40,0 chr1 116931545 . G . PASS END=116931590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:39:0,96,1449:0,96,255:40,0 chr1 116931591 . A . PASS END=116931593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:38,0 chr1 116931594 . C . PASS END=116931594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 116931595 . C . PASS END=116931616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,83,255:36,0 chr1 116931617 . T . PASS END=116931617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 116931618 . T . PASS END=116931627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1162:0,83,255:31,0 chr1 116931628 . C A, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.664;ReadPosRankSum=0.981;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,18,0:0.581,0.000:31:6,9,0:7,9,0:48:85,0,48,643,457,1100:255,0,255:12,0:5.0000e+01,7.6105e-05,5.1238e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,7,11:5,8,10,8 chr1 116931629 . A . PASS END=116931631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 116931632 . T . PASS END=116931632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1031:0,38,255:27,0 chr1 116931633 . G . PASS END=116931641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 116932061 . G . PASS END=116932061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 116932062 . C . PASS END=116932073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1125:0,80,255:36,0 chr1 116932074 . T . PASS END=116932074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:36,0 chr1 116932075 . A . PASS END=116932321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:28:0,80,1019:0,80,255:40,0 chr1 116932322 . C . PASS END=116932329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 116932835 . G . PASS END=116932838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 116932839 . G . PASS END=116933024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:34:0,95,1223:0,95,255:40,0 chr1 116933025 . A . PASS END=116933025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:30,0 chr1 116933026 . T . PASS END=116933033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:31,0 chr1 116933404 . G . PASS END=116933409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:98:49:0,98,1633:0,98,255:40,0 chr1 116933410 . C . PASS END=116933513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,123,255:40,0 chr1 116935476 . C . PASS END=116935494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,820:0,65,255:26,0 chr1 116935495 . C . PASS END=116935498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 116935499 . T . PASS END=116935499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 116935500 . G . PASS END=116935502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 116935503 . T . PASS END=116935503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:29,0 chr1 116935504 . C . PASS END=116935506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 116935507 . C . PASS END=116935507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 116935508 . A . PASS END=116935610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:30:0,87,1199:0,89,255:40,0 chr1 116936153 . T . PASS END=116936153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 116936154 . T . PASS END=116936154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 116936155 . G . PASS END=116936163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:16,0 chr1 116936164 . T . PASS END=116936164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 116936165 . A . PASS END=116936166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 116936167 . G . PASS END=116936167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 116936168 . A . PASS END=116936174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,674:0,54,255:19,0 chr1 116936175 . A . PASS END=116936199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr1 116936200 . G . PASS END=116936203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 116936204 . A . PASS END=116936204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,897:0,67,255:27,0 chr1 116936205 . T . PASS END=116936208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 116936209 . G . PASS END=116936209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 116936210 . G . PASS END=116936213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 116936214 . C . PASS END=116936214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 116936215 . C . PASS END=116936286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1147:0,80,255:37,0 chr1 116936287 . G . PASS END=116936287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 116936288 . A . PASS END=116936316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1136:0,83,255:34,0 chr1 116936317 . G . PASS END=116936317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 116936318 . C . PASS END=116936324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 116936325 . G . PASS END=116936342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,870:0,64,255:25,0 chr1 116936343 . T . PASS END=116936344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 116936345 . G . PASS END=116936345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 116937732 . G . PASS END=116937900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1158:0,82,255:40,0 chr1 116937901 . A . PASS END=116937907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,80,255:26,0 chr1 116939220 . G . PASS END=116939356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,1000:0,81,255:40,0 chr1 116940510 . G . PASS END=116940510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 116940511 . G . PASS END=116940511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1172:0,58,255:33,0 chr1 116940512 . A . PASS END=116940517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1219:0,88,255:37,0 chr1 116940518 . A . PASS END=116940518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr1 116940519 . G . PASS END=116940524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,117,1422:0,117,255:40,0 chr1 116940525 . C . PASS END=116940646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:31:0,84,1260:0,86,255:40,0 chr1 116940647 . G . PASS END=116940653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,77,255:25,0 chr1 116940654 . A . PASS END=116940654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:19,0 chr1 116940655 . A . PASS END=116940658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:21,0 chr1 116940659 . A . PASS END=116940659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 116940660 . G . PASS END=116940660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 116940666 . C . PASS END=116940666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 116941243 . G . PASS END=116941411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:32:0,95,1241:0,95,255:40,0 chr1 116941552 . G . PASS END=116941706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:35:0,99,1335:0,101,255:40,0 chr1 116942042 . G . PASS END=116942165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:31:0,90,1346:0,93,255:40,0 chr1 116943483 . G . PASS END=116943488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1032:0,84,255:30,0 chr1 116943489 . T . PASS END=116943489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 116943490 . C . PASS END=116943490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 116943491 . C . PASS END=116943491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 116943492 . A . PASS END=116943494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:33,0 chr1 116943495 . C . PASS END=116943622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:33:0,93,1271:0,97,255:40,0 chr1 116943623 . C . PASS END=116943628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:25,0 chr1 116943752 . A . PASS END=116943842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:34:0,80,1260:0,80,255:40,0 chr1 116943843 . G . PASS END=116943843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:28,0 chr1 116943844 . T . PASS END=116943845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:29,0 chr1 116943846 . A . PASS END=116943879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,74,255:26,0 chr1 116943880 . G . PASS END=116943880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:22,0 chr1 116943881 . A . PASS END=116943882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 116944176 . G . PASS END=116944277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:49:0,120,1800:0,131,255:40,0 chr1 116946506 . A . PASS END=116946597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:92:36:0,92,1337:0,92,255:40,0 chr1 116947038 . G . PASS END=116947066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1178:0,98,255:37,0 chr1 116952757 . G . PASS END=116952765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1374:0,101,255:38,0 chr1 116952766 . G . PASS END=116952766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:35,0 chr1 116952767 . C . PASS END=116952778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1485:0,105,255:35,0 chr1 117057435 . T . PASS END=117057444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,213,255:40,0 chr1 117061849 . T . PASS END=117061889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,143,255:40,0 chr1 117061917 . T . PASS END=117061924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,111,1756:0,111,255:40,0 chr1 117064511 . T . PASS END=117064605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:64:0,120,1800:0,185,255:40,0 chr1 117078587 . C . PASS END=117078593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1180:0,85,255:34,0 chr1 117078594 . T . PASS END=117078594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:34,0 chr1 117078595 . G . PASS END=117078838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:31:0,87,1305:0,93,255:40,0 chr1 117078839 . A . PASS END=117078850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:25,0 chr1 117086933 . C . PASS END=117086936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 117086937 . C . PASS END=117086937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1107:0,69,255:32,0 chr1 117086938 . A . PASS END=117087192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:84:34:0,84,1185:0,84,255:40,0 chr1 117087193 . C . PASS END=117087195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:38:0,69,1035:0,98,255:23,0 chr1 117087196 . T . PASS END=117087196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1150:0,56,255:22,0 chr1 117087197 . A . PASS END=117087203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:29:0,69,1035:0,71,255:23,0 chr1 117087204 . T . PASS END=117087204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:20,0 chr1 117087205 . T . PASS END=117087205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 117087206 . G . PASS END=117087206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 117087207 . G . PASS END=117087208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 117087209 . A . PASS END=117087209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr1 117087210 . A . PASS END=117087210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:18,0 chr1 117087211 . A . PASS END=117087211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 117087212 . A . PASS END=117087212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:17,0 chr1 117087213 . A . PASS END=117087213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:18,0 chr1 117087214 . C . PASS END=117087216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,52,255:18,0 chr1 117087217 . C . PASS END=117087217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:17,0 chr1 117087218 . T . PASS END=117087226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,675:0,44,255:18,0 chr1 117087779 . C . PASS END=117087779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 117113525 . C . PASS END=117113525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 117113526 . A . PASS END=117113532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1197:0,86,255:34,0 chr1 117113533 . T . PASS END=117113533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 117113534 . G . PASS END=117113594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1178:0,87,255:37,0 chr1 117119934 . T . PASS END=117119936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 117119937 . G . PASS END=117119950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:26,0 chr1 117119951 . G . PASS END=117120172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:81:27:0,81,1039:0,81,255:40,0 chr1 117120173 . G . PASS END=117120173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1329:0,65,255:34,0 chr1 117120174 . G . PASS END=117120184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,100,255:35,0 chr1 117122014 . T . PASS END=117122045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:19,0 chr1 117122046 . G . PASS END=117122095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,853:0,63,255:26,0 chr1 117122096 . C . PASS END=117122135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 117122136 . C . PASS END=117122209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,892:0,72,255:26,0 chr1 117122210 . G . PASS END=117122210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 117122211 . C . PASS END=117122221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 117122222 . A . PASS END=117122222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 117122223 . A . PASS END=117122224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 117122225 . G . PASS END=117122225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 117122226 . A . PASS END=117122241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,837:0,66,255:23,0 chr1 117122242 . C . PASS END=117122245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,75,255:17,0 chr1 117122246 . C . PASS END=117122260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,67,255:22,0 chr1 117122261 . C . PASS END=117122261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 117122262 . T . PASS END=117122263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 117122264 . T . PASS END=117122264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 117122265 . G . PASS END=117122268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 117122269 . G . PASS END=117122282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 117122283 . T . PASS END=117122283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:16,0 chr1 117122284 . C . PASS END=117122285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 117122286 . T . PASS END=117122286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:16,1 chr1 117122287 . C . PASS END=117122288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,643:0,40,255:16,1 chr1 117122289 . T . PASS END=117122290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,617:0,22,255:15,1 chr1 117122291 . C . PASS END=117122291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:6:19:0,6,555:0,6,255:15,1 chr1 117122292 . T . PASS END=117122294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,619:0,22,255:16,1 chr1 117122295 . T . PASS END=117122295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:9:20:0,9,608:0,9,255:15,1 chr1 117122296 . C . PASS END=117122296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:25:20:0,25,664:0,25,255:16,1 chr1 117122297 . C . PASS END=117122297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:9:20:0,9,608:0,9,255:15,1 chr1 117122298 . T . PASS END=117122300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:25:20:0,25,619:0,25,255:16,1 chr1 117122301 . T . PASS END=117122304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,682:0,44,255:17,0 chr1 117122305 . C . PASS END=117122305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:15,0 chr1 117122306 . C . PASS END=117122306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 117122307 . T . PASS END=117122307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 117122308 . C . PASS END=117122310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 117122311 . T . PASS END=117122311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,466:0,18,255:14,0 chr1 117122312 . T . PASS END=117122317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:18,0 chr1 117122318 . T . PASS END=117122318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 117122319 . T . PASS END=117122332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,584:0,40,255:22,0 chr1 117122333 . G . PASS END=117122336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 117122337 . G . PASS END=117122337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,748:0,41,255:21,0 chr1 117122338 . G . PASS END=117122343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 117122344 . T . PASS END=117122345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,875:0,56,255:23,0 chr1 117122346 . C . PASS END=117122350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 117122351 . C . PASS END=117122351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,782:0,17,255:21,0 chr1 117122352 . C . PASS END=117122352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 117122353 . C . PASS END=117122354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 117122355 . C . PASS END=117122357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 117122358 . G . PASS END=117122358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:20,0 chr1 117122359 . C . PASS END=117122359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 117122360 . T . PASS END=117122360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:21,0 chr1 117122361 . T . PASS END=117122361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 117122362 . T . PASS END=117122362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,800:0,28,255:20,0 chr1 117122363 . A . PASS END=117122363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 117122364 . G . PASS END=117122365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 117122366 . C . PASS END=117122367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 117122368 . T . PASS END=117122368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 117122369 . C . PASS END=117122371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,784:0,52,255:19,0 chr1 117122372 . G . PASS END=117122373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 117122374 . A . PASS END=117122374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 117122375 . A . PASS END=117122380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:21,0 chr1 117122381 . G . PASS END=117122381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 117122382 . G . PASS END=117122385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 117122386 . C . PASS END=117122410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 117122411 . G . PASS END=117122411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 117122412 . C . PASS END=117122445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:18,0 chr1 117122446 . C . PASS END=117122446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 117122447 . C . PASS END=117122448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 117122449 . T . PASS END=117122449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 117122450 . C . PASS END=117122451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 117122452 . C . PASS END=117122452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr1 117122453 . A . PASS END=117122453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 117122454 . G . PASS END=117122454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 117122455 . A . PASS END=117122470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,653:0,51,255:18,0 chr1 117122471 . G . PASS END=117122473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 117122474 . C . PASS END=117122488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:20:10:0,20,360:0,20,255:10,0 chr1 117122489 . C . PASS END=117122489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 117122490 . A . PASS END=117122491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 117122492 . G . PASS END=117122492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 117122493 . G . PASS END=117122499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 117127267 . C . PASS END=117127267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 117127268 . T . PASS END=117127274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 117127275 . A . PASS END=117127275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 117127276 . T . PASS END=117127277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 117127278 . A . PASS END=117127278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 117127279 . C . PASS END=117127285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 117127286 . A . PASS END=117127286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 117127287 . G . PASS END=117127287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 117127288 . C . PASS END=117127291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 117127292 . C . PASS END=117127293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 117127294 . G . PASS END=117127300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 117127301 . G . PASS END=117127305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr1 117127306 . C . PASS END=117127306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:17,0 chr1 117127307 . C . PASS END=117127308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 117127309 . C . PASS END=117127309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 117127310 . T . PASS END=117127313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 117127314 . C . PASS END=117127314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:19,0 chr1 117127315 . G . PASS END=117127315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 117127316 . C . PASS END=117127317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:22,0 chr1 117127318 . T . PASS END=117127319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 117127320 . T . PASS END=117127321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 117127322 . C . PASS END=117127322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 117127323 . C . PASS END=117127323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:22,0 chr1 117127324 . A . PASS END=117127324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:23,0 chr1 117127325 . C . PASS END=117127326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,801:0,36,255:24,0 chr1 117127327 . T . PASS END=117127327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:23,0 chr1 117127328 . G . PASS END=117127328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 117127329 . C . PASS END=117127329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,800:0,6,255:23,0 chr1 117127330 . C . PASS END=117127336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:27,0 chr1 117127337 . G . PASS END=117127337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 117127338 . C . PASS END=117127338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr1 117127339 . T . PASS END=117127354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1094:0,84,255:29,0 chr1 117127355 . C . PASS END=117127355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 117127356 . A . PASS END=117127376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1072:0,87,255:31,0 chr1 117127377 . C . PASS END=117127378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 117127379 . G . PASS END=117127394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1216:0,83,255:31,0 chr1 117127395 . T . PASS END=117127395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr1 117127396 . T . PASS END=117127439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1241:0,86,255:33,0 chr1 117127440 . T . PASS END=117127440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:28,0 chr1 117127441 . G . PASS END=117127446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 117127447 . G . PASS END=117127447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 117127448 . C . PASS END=117127456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1239:0,86,255:33,0 chr1 117127457 . A . PASS END=117127457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1008:0,49,255:29,0 chr1 117127458 . T . PASS END=117127469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1226:0,91,255:36,0 chr1 117127470 . G . PASS END=117127470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:35,0 chr1 117127471 . C . PASS END=117127555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1196:0,86,255:36,0 chr1 117127556 . T . PASS END=117127556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:31,0 chr1 117127557 . T . PASS END=117127565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:36,0 chr1 117127566 . A . PASS END=117127566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr1 117127567 . G . PASS END=117127601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,95,255:36,0 chr1 117127602 . C . PASS END=117127611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,1125:0,66,255:26,0 chr1 117127612 . G . PASS END=117127613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 117127614 . A . PASS END=117127615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 117127616 . C . PASS END=117127616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:23,0 chr1 117127617 . T . PASS END=117127669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,886:0,61,255:26,0 chr1 117127670 . G . PASS END=117127674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:17,0 chr1 117131316 . C . PASS END=117131316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117131317 . T . PASS END=117131319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 117131320 . C . PASS END=117131320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:27,0 chr1 117131321 . T . PASS END=117131322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 117131323 . T . PASS END=117131323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 117131324 . T . PASS END=117131328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 117131329 . A . PASS END=117131329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 117131330 . G . PASS END=117131330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117131331 . T . PASS END=117131331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 117131332 . G . PASS END=117131332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117131333 . A . PASS END=117131334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 117131335 . T . PASS END=117131336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117131337 . C . PASS END=117131337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 117131338 . T . PASS END=117131340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 117131341 . G . PASS END=117131343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 117131344 . C . PASS END=117131348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 117131349 . A . PASS END=117131349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr1 117131350 . A . PASS END=117131353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 117131354 . T . PASS END=117131354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 117131355 . C . PASS END=117131359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 117131360 . G . PASS END=117131363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 117131364 . G . PASS END=117131365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 117131366 . T . PASS END=117131366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 117131367 . T . PASS END=117131368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 117131369 . T . PASS END=117131369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:26,0 chr1 117131370 . A . PASS END=117131372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 117131373 . A . PASS END=117131373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 117131374 . G . PASS END=117131375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117131376 . C . PASS END=117131376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 117131377 . G . PASS END=117131379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117131380 . G . PASS END=117131381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr1 117131382 . T . PASS END=117131391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1023:0,71,255:26,0 chr1 117131392 . C . PASS END=117131392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 117131393 . A . PASS END=117131393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 117131394 . G . PASS END=117131413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1202:0,87,255:32,0 chr1 117131414 . T . PASS END=117131414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:29,0 chr1 117131415 . A . PASS END=117131428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1149:0,82,255:31,0 chr1 117131429 . T . PASS END=117131429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:29,0 chr1 117131430 . C . PASS END=117131440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1208:0,83,255:30,0 chr1 117131441 . G . PASS END=117131455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,76,255:26,0 chr1 117131456 . A . PASS END=117131457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117131458 . G . PASS END=117131460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr1 117131461 . G . PASS END=117131472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 117131473 . C . PASS END=117131473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 117131474 . G . PASS END=117131689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1260:0,85,255:40,0 chr1 117131690 . A . PASS END=117131690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:28,0 chr1 117131691 . G . PASS END=117131696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1305:0,90,255:29,0 chr1 117131697 . T . PASS END=117131697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:26,0 chr1 117131698 . C . PASS END=117131699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117131700 . T . PASS END=117131700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:27,0 chr1 117131701 . C . PASS END=117131702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 117131703 . A . PASS END=117131703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1045:0,52,255:26,0 chr1 117131704 . T . PASS END=117131704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117131705 . T . PASS END=117131706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr1 117131707 . G . PASS END=117131710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 117131711 . A . PASS END=117131711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 117131712 . C . PASS END=117131713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 117131714 . T . PASS END=117131714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr1 117131715 . G . PASS END=117131716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 117131717 . A . PASS END=117131718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:28,0 chr1 117131719 . C . PASS END=117131719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 117131720 . T . PASS END=117131720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:28,0 chr1 117131721 . T . PASS END=117131721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 117131722 . T . PASS END=117131725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 117131726 . A . PASS END=117131726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr1 117142563 . C . PASS END=117142568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr1 117142569 . G . PASS END=117142930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1131:0,81,255:40,0 chr1 117142931 . G . PASS END=117142937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,900:0,71,255:22,0 chr1 117142938 . G . PASS END=117142957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:17:0,51,621:0,51,255:19,0 chr1 117142958 . A . PASS END=117142958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 117142959 . A . PASS END=117142967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 117145004 . C . PASS END=117145016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,3:80:99:78:0,120,1800:0,168,255:40,0 chr1 117146246 . C . PASS END=117146617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,995:0,80,255:40,0 chr1 117146618 . T . PASS END=117146618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 117146619 . G . PASS END=117146627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 117146628 . C . PASS END=117146647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 117149114 . C . PASS END=117149114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 117149115 . C . PASS END=117149115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 117149116 . A . PASS END=117149116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 117149117 . A . PASS END=117149117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 117149118 . G . PASS END=117149118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 117149119 . T . PASS END=117149119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:21,0 chr1 117149120 . G . PASS END=117149131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,945:0,62,255:26,0 chr1 117149132 . G . PASS END=117149139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 117149140 . T . PASS END=117149141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 117149142 . G . PASS END=117149144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 117149145 . C . PASS END=117149145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 117149146 . T . PASS END=117149158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 117149159 . C . PASS END=117149169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 117149170 . T . PASS END=117149170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:22,0 chr1 117149171 . C . PASS END=117149173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 117150564 . T . PASS END=117150572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr1 117150573 . G . PASS END=117150576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 117150577 . T . PASS END=117150577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 117150578 . A . PASS END=117150580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 117150581 . A . PASS END=117150581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 117150582 . T . PASS END=117150582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 117150583 . G . PASS END=117150584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 117150585 . G . PASS END=117150585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 117150586 . G . PASS END=117150587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 117150588 . T . PASS END=117150588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 117150589 . G . PASS END=117150601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,917:0,72,255:25,0 chr1 117150602 . T . PASS END=117150602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 117150603 . T . PASS END=117150606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:26,0 chr1 117150607 . C . PASS END=117150608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 117150609 . C . PASS END=117150609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 117150610 . C . PASS END=117150613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 117150614 . T . PASS END=117150622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 117150623 . T . PASS END=117150625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117150626 . C . PASS END=117150650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,967:0,65,255:26,0 chr1 117150651 . T . PASS END=117150758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1054:0,81,255:36,0 chr1 117150759 . G . PASS END=117150759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 117150760 . G . PASS END=117150789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1073:0,89,255:35,0 chr1 117150790 . A . PASS END=117150790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr1 117150791 . G . PASS END=117150795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1260:0,111,255:28,0 chr1 117150796 . A . PASS END=117150829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr1 117150830 . G . PASS END=117150831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 117150832 . C . PASS END=117150872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 117150873 . C . PASS END=117150873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 117150874 . C . PASS END=117150912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 117150913 . C . PASS END=117150950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,623:0,41,255:19,0 chr1 117150951 . T . PASS END=117150951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 117150952 . G . PASS END=117150953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 117156387 . C . PASS END=117156390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr1 117156391 . T . PASS END=117156596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:27:0,80,992:0,80,255:40,0 chr1 117156597 . T . PASS END=117156597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:32,0 chr1 117156598 . G . PASS END=117156643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1305:0,96,255:38,0 chr1 117156644 . G . PASS END=117156644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:28,0 chr1 117156645 . G . PASS END=117156655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 117156656 . A . PASS END=117156656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,856:0,54,255:26,0 chr1 117156657 . C . PASS END=117156658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 117156659 . T . PASS END=117156659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 117156660 . T . PASS END=117156665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:30,0 chr1 117156666 . G . PASS END=117156677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:29,0 chr1 117156678 . C . PASS END=117156733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1140:0,80,255:34,0 chr1 117156734 . G . PASS END=117156735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 117156736 . G . PASS END=117156737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 117156738 . C . PASS END=117156740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:26,0 chr1 117156741 . G . PASS END=117156755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1072:0,87,255:29,0 chr1 117156756 . G . PASS END=117156769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:23,0 chr1 117156770 . G . PASS END=117156770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 117156771 . C . PASS END=117156771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 117156772 . A . PASS END=117156772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 117156773 . G . PASS END=117156776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 117156777 . T . PASS END=117156797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,690:0,54,255:19,0 chr1 117158702 . C . PASS END=117158715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:24,0 chr1 117158716 . T . PASS END=117158716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 117158717 . T . PASS END=117158717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 117158718 . T . PASS END=117158718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 117158719 . G . PASS END=117158729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr1 117158730 . C . PASS END=117158736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:29,0 chr1 117158737 . T . PASS END=117158737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 117158738 . A . PASS END=117158778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:30:0,90,1078:0,90,255:40,0 chr1 117158779 . G . PASS END=117158779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:37,0 chr1 117158780 . C . PASS END=117159041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1215:0,85,255:40,0 chr1 117159042 . T . PASS END=117159042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 117159043 . T . PASS END=117159052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1208:0,83,255:29,0 chr1 117159053 . T . PASS END=117159053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 117159054 . G . PASS END=117159065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1133:0,80,255:29,0 chr1 117159066 . T . PASS END=117159066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:26,0 chr1 117159067 . G . PASS END=117159067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 117159068 . C . PASS END=117159068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 117159069 . T . PASS END=117159073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 117159074 . C . PASS END=117159079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 117159851 . C . PASS END=117159908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:34:0,102,1295:0,102,255:40,0 chr1 117208906 . C . PASS END=117208939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 117208940 . G . PASS END=117208941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 117208942 . A . PASS END=117208948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 117236752 . A . PASS END=117236819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,114,1800:0,114,255:40,0 chr1 117237381 . C . PASS END=117237391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,869:0,63,255:23,0 chr1 117237392 . C . PASS END=117237392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 117237393 . T . PASS END=117237399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:23,0 chr1 117237400 . G . PASS END=117237436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 117237437 . A G, 43.68 PASS DP=24;MQ=250.00;MQRankSum=3.889;ReadPosRankSum=1.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,8,0:0.333,0.000:24:9,4,0:7,4,0:43:78,0,50,249,572,822:186,0,255:14,0:4.3679e+01,2.0787e-04,5.3000e+01,2.4921e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,6,2:10,6,4,4 chr1 117237438 . G . PASS END=117237440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 117237441 . C . PASS END=117237474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,53,255:19,0 chr1 117237475 . C . PASS END=117237477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 117248571 . A . PASS END=117248580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,120,1800:0,135,255:40,0 chr1 117248581 . T . PASS END=117248581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:68:54:0,68,1744:0,68,255:40,0 chr1 117248582 . A . PASS END=117248626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,133,255:40,0 chr1 117249079 . T . PASS END=117249154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,129,255:40,0 chr1 117297115 . A . PASS END=117297175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,105,1685:0,105,255:40,0 chr1 117297253 . G . PASS END=117297593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:48:0,120,1800:0,125,255:40,0 chr1 117303024 . A . PASS END=117303031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1106:0,89,255:35,0 chr1 117303032 . T . PASS END=117303032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:34,0 chr1 117303033 . C . PASS END=117303230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:35:0,89,1270:0,89,255:40,0 chr1 117303231 . G . PASS END=117303231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1315:0,78,255:32,0 chr1 117303232 . T . PASS END=117303254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1243:0,92,255:34,0 chr1 117307028 . G . PASS END=117307228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:36:0,92,1312:0,92,255:40,0 chr1 117311086 . A . PASS END=117311090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 117311091 . G . PASS END=117311101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,634:0,60,255:20,0 chr1 117311102 . A . PASS END=117311102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 117311103 . A . PASS END=117311109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 117311110 . A . PASS END=117311119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:20,0 chr1 117311120 . T . PASS END=117311120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 117311121 . A . PASS END=117311125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 117311126 . A . PASS END=117311126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 117311127 . G . PASS END=117311145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:25,0 chr1 117311146 . A . PASS END=117311146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr1 117311147 . C A, 49.92 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=3.617;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:5,5,0:8,7,0:48:85,0,50,414,450,878:255,0,255:13,0:4.9918e+01,6.6010e-05,5.3000e+01,4.1437e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,4,8:3,10,9,3 chr1 117311148 . C . PASS END=117311183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,787:0,61,255:26,0 chr1 117311184 . T . PASS END=117311184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:21,0 chr1 117311185 . C . PASS END=117311242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,806:0,62,255:26,0 chr1 117311243 . G . PASS END=117311246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:21:0,42,630:0,63,255:18,0 chr1 117311247 . C . PASS END=117311251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 117311252 . A . PASS END=117311276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:16:0,42,630:0,44,255:19,0 chr1 117311277 . A . PASS END=117311277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:15,0 chr1 117311278 . A . PASS END=117311304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr1 117311305 . A . PASS END=117311305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 117311306 . A . PASS END=117311344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:18,0 chr1 117311345 . A . PASS END=117311345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 117311346 . G . PASS END=117311348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 117311349 . C . PASS END=117311349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 117311350 . A . PASS END=117311370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,675:0,44,255:19,0 chr1 117311371 . C . PASS END=117311371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:14,0 chr1 117311372 . A . PASS END=117311383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 117311384 . A . PASS END=117311399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,451:0,39,255:13,0 chr1 117311400 . A . PASS END=117311403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 117311404 . A . PASS END=117311405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 117452826 . A . PASS END=117452826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:24,0 chr1 117452827 . T . PASS END=117452831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:25,0 chr1 117452832 . C . PASS END=117452832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:24,0 chr1 117452833 . G . PASS END=117452872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 117452873 . G . PASS END=117452873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 117452874 . G . PASS END=117452874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 117473770 . A . PASS END=117473802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,116,1800:0,116,255:40,0 chr1 117473803 . G . PASS END=117473836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,162,255:40,0 chr1 117484337 . C . PASS END=117484360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:15,0 chr1 117484361 . G . PASS END=117484361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 117484362 . A . PASS END=117484388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,637:0,48,255:19,0 chr1 117484389 . G . PASS END=117484427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:21:0,63,784:0,63,255:26,0 chr1 117484428 . C . PASS END=117484439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 117484440 . C . PASS END=117484454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,856:0,64,255:25,0 chr1 117484455 . T . PASS END=117484455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 117484456 . G . PASS END=117484466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,840:0,75,255:25,0 chr1 117484467 . C . PASS END=117484467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 117484468 . T . PASS END=117484469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 117484470 . A . PASS END=117484470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 117484471 . T . PASS END=117484496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,893:0,60,255:26,0 chr1 117484497 . T . PASS END=117484499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 117484500 . A . PASS END=117484524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,68,255:24,0 chr1 117484525 . G . PASS END=117484542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,57,255:18,0 chr1 117484543 . C . PASS END=117484549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 117484550 . A . PASS END=117484550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 117484551 . G . PASS END=117484565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 117484566 . G . PASS END=117484566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 117484567 . T . PASS END=117484567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 117484568 . T . PASS END=117484568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 117484569 . A . PASS END=117484578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr1 117484579 . G . PASS END=117484579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:23,0 chr1 117484580 . C . PASS END=117484590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,825:0,72,255:24,0 chr1 117484591 . G . PASS END=117484591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:20,0 chr1 117484592 . T . PASS END=117484608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 117484609 . A . PASS END=117484609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 117484610 . A . PASS END=117484623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 117484624 . G . PASS END=117484641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,666:0,54,255:18,0 chr1 117484642 . T . PASS END=117484642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 117484643 . G . PASS END=117484662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 117484663 . G . PASS END=117484663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 117484664 . C . PASS END=117484665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 117484666 . A . PASS END=117484682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:12:0,31,427:0,31,255:14,0 chr1 117484683 . T . PASS END=117484686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:12:0,22,382:0,22,255:9,0 chr1 117484687 . G . PASS END=117484690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 117484691 . C . PASS END=117484693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 117484694 . T . PASS END=117484702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 117484703 . A . PASS END=117484705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 117487301 . T . PASS END=117487336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:23,0 chr1 117487337 . G . PASS END=117487337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 117487338 . G . PASS END=117487362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:22,0 chr1 117487363 . G . PASS END=117487438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,630:0,40,255:19,0 chr1 117487439 . A . PASS END=117487459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 117487460 . G . PASS END=117487465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 117487466 . G . PASS END=117487492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr1 117487493 . G . PASS END=117487533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:19,0 chr1 117487534 . G . PASS END=117487540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 117487541 . T . PASS END=117487551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 117487552 . A . PASS END=117487564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:21,0 chr1 117487565 . A . PASS END=117487567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 117487568 . C . PASS END=117487573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 117487574 . G . PASS END=117487574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 117487575 . C . PASS END=117487581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:22,0 chr1 117487582 . G . PASS END=117487582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 117487583 . T . PASS END=117487602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:23,0 chr1 117487603 . G . PASS END=117487603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 117487604 . A . PASS END=117487607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 117487608 . G . PASS END=117487612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 117487613 . C . PASS END=117487618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 117487619 . G . PASS END=117487621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 117487622 . G . PASS END=117487627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 117487628 . T . PASS END=117487652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 117487653 . C . PASS END=117487653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 117487654 . A . PASS END=117487666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr1 117487667 . T . PASS END=117487667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 117487668 . C . PASS END=117487673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 117487674 . A . PASS END=117487684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:16:0,37,585:0,37,255:13,0 chr1 117487685 . A . PASS END=117487685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 117487686 . A . PASS END=117487686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 117487687 . G . PASS END=117487688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 117487689 . T . PASS END=117487689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 117487690 . G . PASS END=117487692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 117487693 . A . PASS END=117487704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 117487705 . C . PASS END=117487705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 117487706 . A . PASS END=117487707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 117487708 . C . PASS END=117487708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 117487709 . C . PASS END=117487709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 117487710 . A G, 81.35 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,13,0:1.000,0.000:13:0,2,0:0,11,0:31:119,34,0,219,219,219:255,39,0:0,0:8.1353e+01,3.1353e+01,3.1815e-03,2.1612e+02,2.5089e+02,2.1913e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,4,9:0,0,7,6:117487710 chr1 117487711 . T A, 81.35 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,13,0:1.000,0.000:13:0,2,0:0,11,0:31:119,34,0,219,219,219:255,39,0:0,0:8.1353e+01,3.1353e+01,3.1815e-03,2.1612e+02,2.5089e+02,2.1913e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,4,9:0,0,7,6:117487710 chr1 117487712 . C . PASS END=117487714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 117491814 . T . PASS END=117491814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr1 117491815 . T . PASS END=117491824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,717:0,63,255:21,0 chr1 117491825 . G . PASS END=117491825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 117491826 . C . PASS END=117491826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 117491827 . T . PASS END=117491827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 117491828 . G . PASS END=117491836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,894:0,68,255:27,0 chr1 117491837 . A . PASS END=117491864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1019:0,84,255:31,0 chr1 117491865 . T . PASS END=117491865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:27,0 chr1 117491866 . G . PASS END=117491869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 117491870 . C . PASS END=117491870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 117491871 . T . PASS END=117491875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 117491876 . T . PASS END=117491880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 117491881 . C . PASS END=117491881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117491882 . A . PASS END=117491882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 117491883 . T . PASS END=117491883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117491884 . C . PASS END=117491884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 117491885 . A . PASS END=117491887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117491888 . A . PASS END=117491888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:25,0 chr1 117491889 . C . PASS END=117491890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1086:0,74,255:26,0 chr1 117491891 . G . PASS END=117491894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 117491895 . G . PASS END=117491897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 117491898 . C . PASS END=117491899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117491900 . G . PASS END=117491900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 117491901 . A . PASS END=117491902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117491903 . G . PASS END=117491904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 117491905 . C . PASS END=117491905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117491906 . G . PASS END=117491906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 117491907 . T . PASS END=117491908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117491909 . C . PASS END=117491948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr1 117491949 . G . PASS END=117492020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,651:0,41,255:19,0 chr1 117492021 . C . PASS END=117492021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 117492022 . T . PASS END=117492024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 117492025 . G . PASS END=117492025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 117492026 . A . PASS END=117492047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,637:0,51,255:19,0 chr1 117492048 . A . PASS END=117492049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 117492050 . C . PASS END=117492050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 117492051 . A . PASS END=117492135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,709:0,63,255:25,0 chr1 117492136 . C . PASS END=117492187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,576:0,40,255:19,0 chr1 117492188 . T . PASS END=117492194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 117503865 . A . PASS END=117503866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 117503867 . C . PASS END=117503867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 117503868 . C . PASS END=117503868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 117503869 . A . PASS END=117503871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:27:0,70,986:0,70,255:27,0 chr1 117503872 . C . PASS END=117503874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 117503875 . C . PASS END=117503875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 117503876 . C . PASS END=117503876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 117503877 . A . PASS END=117503878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 117503879 . G . PASS END=117503883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 117503884 . C . PASS END=117503884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 117503885 . C . PASS END=117503899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1066:0,85,255:33,0 chr1 117503900 . G . PASS END=117503900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr1 117503901 . T . PASS END=117503903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 117503904 . C . PASS END=117503904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:31,0 chr1 117503905 . C . PASS END=117503906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 117503907 . G . PASS END=117503907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:31,0 chr1 117503908 . G . PASS END=117503977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1080:0,83,255:34,0 chr1 117503978 . T . PASS END=117503978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,930:0,65,255:31,0 chr1 117503979 . T . PASS END=117504245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:33:0,82,1065:0,82,255:40,0 chr1 117504246 . A . PASS END=117504246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1404:0,73,255:36,0 chr1 117504247 . G . PASS END=117504274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:34:0,88,1173:0,88,255:40,0 chr1 117504275 . T . PASS END=117504275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:30,0 chr1 117504276 . T . PASS END=117504290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1210:0,83,255:32,0 chr1 117509533 . A . PASS END=117509533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 117509534 . T . PASS END=117509541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:23,0 chr1 117509542 . T . PASS END=117509543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 117509544 . G . PASS END=117509547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 117509548 . T . PASS END=117509548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 117509549 . G . PASS END=117509550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 117509551 . A . PASS END=117509551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr1 117509552 . G . PASS END=117509591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1086:0,84,255:34,0 chr1 117509592 . T . PASS END=117509592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1141:0,72,255:31,0 chr1 117509593 . T . PASS END=117509687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1106:0,85,255:38,0 chr1 117509688 . C . PASS END=117509688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:37,0 chr1 117509689 . C . PASS END=117509876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1169:0,80,255:40,0 chr1 117509877 . C . PASS END=117509893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:26:0,62,922:0,62,255:26,0 chr1 117509894 . T . PASS END=117509894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,850:0,59,255:23,0 chr1 117509895 . T . PASS END=117509909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 117509910 . A . PASS END=117509910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 117509911 . C . PASS END=117509914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 117509915 . T . PASS END=117509918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 117509919 . T . PASS END=117509926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 117509927 . T . PASS END=117509933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 117509934 . A . PASS END=117509936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 117509937 . G . PASS END=117509938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 117509939 . C . PASS END=117509939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 117509940 . T . PASS END=117509940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 117509941 . T . PASS END=117509944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 117509945 . A . PASS END=117509952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 117516838 . G . PASS END=117516945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:38:0,114,1405:0,114,255:40,0 chr1 117527302 . A . PASS END=117527310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 117527311 . C . PASS END=117527325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,799:0,63,255:25,0 chr1 117527326 . G . PASS END=117527329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,851:0,81,255:27,0 chr1 117527330 . T . PASS END=117527330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 117527331 . G . PASS END=117527397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1019:0,80,255:32,0 chr1 117527398 . T . PASS END=117527398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 117527399 . G . PASS END=117527457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1124:0,80,255:37,0 chr1 117527458 . A . PASS END=117527458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:34,0 chr1 117527459 . A . PASS END=117527466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:36,0 chr1 117527467 . T . PASS END=117527467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:32,0 chr1 117527468 . G . PASS END=117527501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1202:0,83,255:33,0 chr1 117527502 . A . PASS END=117527504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 117527505 . T . PASS END=117527521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,86,255:32,0 chr1 117527522 . T . PASS END=117527522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:29,0 chr1 117527523 . C . PASS END=117527563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1186:0,83,255:34,0 chr1 117527564 . A . PASS END=117527589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,65,255:26,0 chr1 117527590 . T . PASS END=117527598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:18,0 chr1 117527599 . A . PASS END=117527607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:15:0,33,495:0,45,255:13,0 chr1 117529423 . T . PASS END=117529457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:35,0 chr1 117529458 . G A,T, 48.92 PASS DP=37;MQ=250.00;FractionInformativeReads=0.973 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,16,0,0:0.444,0.000,0.000:36:4,8,0,0:16,8,0,0:47:84,0,50,530,715,580,544,715,1245,1259:255,0,255:20,0:4.8924e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:11,9,10,6:11,9,8,8 chr1 117529459 . T . PASS END=117529495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:36:0,92,1280:0,92,255:40,0 chr1 117529496 . C . PASS END=117529539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:96:38:0,96,1313:0,96,255:40,0 chr1 117529540 . A . PASS END=117529540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1180:0,64,255:30,0 chr1 117529541 . G . PASS END=117529552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1133:0,82,255:30,0 chr1 117529553 . C . PASS END=117529553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 117529554 . G . PASS END=117529561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 117529562 . C . PASS END=117529568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 117529569 . A . PASS END=117529569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1021:0,57,255:24,0 chr1 117529570 . T . PASS END=117529580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:25,0 chr1 117529581 . A . PASS END=117529589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,52,255:19,0 chr1 117544395 . A . PASS END=117544482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:70:0,120,1800:0,167,255:40,1 chr1 117552472 . C . PASS END=117552663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:31:0,90,1164:0,92,255:40,0 chr1 117552664 . C . PASS END=117552664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:32,0 chr1 117552665 . C . PASS END=117552850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1197:0,89,255:40,0 chr1 117552851 . T . PASS END=117552851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 117552852 . G . PASS END=117552852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117554172 . T . PASS END=117554179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr1 117554180 . G . PASS END=117554180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 117554181 . A . PASS END=117554183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 117554184 . C . PASS END=117554383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1142:0,81,255:40,0 chr1 117554384 . T . PASS END=117554399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:37:0,94,1220:0,94,255:37,0 chr1 117554400 . C . PASS END=117554400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:35,0 chr1 117554401 . A . PASS END=117554420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,105,1352:0,111,255:39,0 chr1 117554421 . A G, 48.83 PASS DP=43;MQ=250.00;MQRankSum=5.564;ReadPosRankSum=1.798;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,19,0:0.442,0.000:43:15,7,0:9,12,0:47:84,0,50,671,842,1513:255,0,255:23,0:4.8827e+01,7.8694e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,10,9:11,13,12,7 chr1 117554422 . C . PASS END=117554458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1324:0,92,255:40,0 chr1 117554459 . A . PASS END=117554554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,92,255:40,0 chr1 117554555 . A . PASS END=117554555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 117554556 . C . PASS END=117554556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 117554557 . C . PASS END=117554578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:26,0 chr1 117554579 . C . PASS END=117554580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 117554581 . G . PASS END=117554581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 117554582 . C . PASS END=117554582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 117554583 . C . PASS END=117554586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 117554587 . A . PASS END=117554588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 117556028 . T . PASS END=117556034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1098:0,83,255:34,0 chr1 117556035 . T . PASS END=117556035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:33,0 chr1 117556036 . T . PASS END=117556200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1225:0,86,255:40,0 chr1 117556201 . A . PASS END=117556201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1202:0,53,255:33,0 chr1 117556202 . A . PASS END=117556211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1199:0,91,255:35,0 chr1 117556212 . A . PASS END=117556212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1136:0,78,255:34,0 chr1 117556213 . G . PASS END=117556245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1137:0,80,255:36,0 chr1 117556246 . A . PASS END=117556247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 117556248 . G . PASS END=117556249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 117556250 . T . PASS END=117556253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:29:0,71,1015:0,71,255:26,0 chr1 117556254 . C . PASS END=117556257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 117556258 . A . PASS END=117556258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 117556259 . A . PASS END=117556260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 117556261 . G . PASS END=117556261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 117556262 . C . PASS END=117556292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1103:0,80,255:31,0 chr1 117556293 . A . PASS END=117556295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:26,0 chr1 117556296 . G . PASS END=117556303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr1 117556304 . G . PASS END=117556312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 117556313 . G . PASS END=117556313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 117556314 . A . PASS END=117556320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1027:0,76,255:26,0 chr1 117556321 . G . PASS END=117556325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 117556326 . A . PASS END=117556328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1100:0,74,255:27,0 chr1 117556329 . G . PASS END=117556329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117556330 . G . PASS END=117556401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,809:0,61,255:26,0 chr1 117556402 . A . PASS END=117556407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 117556408 . C . PASS END=117556411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 117556412 . C . PASS END=117556414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:18,0 chr1 117559712 . C . PASS END=117559721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 117559722 . G . PASS END=117559725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 117559726 . A G, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,14,0:0,10,0:69:157,72,0,922,72,922:255,72,0:0,0:1.1923e+02,6.9230e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,8:0,0,18,6 chr1 117559727 . T . PASS END=117559729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 117559730 . C . PASS END=117559730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 117559731 . T . PASS END=117559743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 117559744 . C . PASS END=117559744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr1 117559745 . A . PASS END=117559762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr1 117559763 . G . PASS END=117559763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 117559764 . A . PASS END=117559765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 117559766 . A . PASS END=117559807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,876:0,61,255:26,0 chr1 117559808 . C . PASS END=117559809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 117559810 . C . PASS END=117559811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 117559812 . G . PASS END=117559813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117559814 . C . PASS END=117559852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,978:0,72,255:26,0 chr1 117559853 . C . PASS END=117559853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 117559854 . C . PASS END=117559860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:22,0 chr1 117559861 . G . PASS END=117559864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 117559865 . C . PASS END=117559865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 117559866 . T . PASS END=117559867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 117559868 . G . PASS END=117559868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 117559869 . C . PASS END=117559872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 117559873 . G . PASS END=117559875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 117559876 . C . PASS END=117559877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 117559878 . G . PASS END=117559897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 117559898 . G . PASS END=117560030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1125:0,80,255:36,0 chr1 117560031 . G . PASS END=117560042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,78,255:26,0 chr1 117560043 . G . PASS END=117560043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 117560044 . G . PASS END=117560047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr1 117560048 . G . PASS END=117560052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:52:23:0,52,762:0,52,255:19,0 chr1 117560053 . C . PASS END=117560058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 117560059 . T . PASS END=117560095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,599:0,41,255:19,0 chr1 117560778 . A . PASS END=117560781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr1 117560782 . A . PASS END=117560782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 117560783 . A . PASS END=117560784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,989:0,87,255:30,0 chr1 117560785 . T . PASS END=117560785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:29,0 chr1 117560786 . T . PASS END=117560792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 117560793 . T . PASS END=117560793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,980:0,59,255:28,0 chr1 117560794 . T . PASS END=117560801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1078:0,90,255:30,0 chr1 117560802 . T . PASS END=117560802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 117560803 . G . PASS END=117560810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1090:0,90,255:31,0 chr1 117560811 . A . PASS END=117560811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:31,0 chr1 117560812 . G . PASS END=117560814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1189:0,86,255:33,0 chr1 117560815 . G . PASS END=117560815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:32,0 chr1 117560816 . C . PASS END=117561179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:33:0,80,1215:0,80,255:40,0 chr1 117561180 . C . PASS END=117561182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 117564195 . A . PASS END=117564590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:34:0,92,1199:0,92,255:40,0 chr1 117564591 . A . PASS END=117564591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:30,0 chr1 117564592 . A . PASS END=117564605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:31,0 chr1 117568131 . G . PASS END=117568150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 117568151 . A . PASS END=117568176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:29,0 chr1 117568177 . T . PASS END=117568179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 117568180 . G . PASS END=117568502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,89,255:40,0 chr1 117568503 . T . PASS END=117568507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:26,0 chr1 117568508 . C . PASS END=117568510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 117568511 . A . PASS END=117568526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,71,255:26,0 chr1 117576482 . A . PASS END=117576482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 117576483 . G . PASS END=117576486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 117576487 . A . PASS END=117576487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 117576488 . C . PASS END=117576490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:26,0 chr1 117576491 . T . PASS END=117576493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 117576494 . C . PASS END=117576494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 117576495 . T . PASS END=117576498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 117576499 . A . PASS END=117576499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 117576500 . G . PASS END=117576521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:35,0 chr1 117576522 . A . PASS END=117576522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr1 117576523 . C . PASS END=117576723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1260:0,81,255:40,0 chr1 117602969 . A . PASS END=117602984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,568:0,40,255:19,0 chr1 117602985 . G . PASS END=117602996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:22,0 chr1 117603077 . G . PASS END=117603087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,931:0,75,255:25,0 chr1 117603088 . T . PASS END=117603089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 117603090 . T . PASS END=117603094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 117603095 . A . PASS END=117603095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:21,0 chr1 117603096 . G . PASS END=117603146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,848:0,66,255:24,0 chr1 117603147 . G . PASS END=117603150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 117603151 . G . PASS END=117603174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,50,255:19,0 chr1 117603175 . A . PASS END=117603179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 117605009 . C . PASS END=117605009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:28,0 chr1 117605010 . A . PASS END=117605013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 117605014 . C . PASS END=117605014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr1 117605015 . T . PASS END=117605040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1266:0,83,255:40,0 chr1 117605041 . A . PASS END=117605041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:49:44:0,49,1391:0,49,255:38,0 chr1 117605042 . C . PASS END=117605087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:40:0,98,1436:0,98,255:40,0 chr1 117605088 . G . PASS END=117605095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:40:0,90,1350:0,107,255:35,0 chr1 117616283 . A . PASS END=117616316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:55:0,120,1800:0,135,255:40,0 chr1 117616317 . G . PASS END=117616349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,149,255:40,0 chr1 117617492 . G . PASS END=117617506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,840:0,72,255:26,0 chr1 117617507 . G . PASS END=117617667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1260:0,87,255:40,2 chr1 117617668 . G . PASS END=117617704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,157,255:40,0 chr1 117617705 . A G, 50.00 PASS DP=67;MQ=250.00;MQRankSum=6.992;ReadPosRankSum=1.229;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,37,0:0.552,0.000:67:14,14,0:16,23,0:48:85,0,49,1290,1044,2334:255,0,255:30,0:5.0000e+01,7.0669e-05,5.2041e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,16,21:16,14,17,20 chr1 117617706 . A . PASS END=117617736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,114,1800:0,114,255:40,0 chr1 117617737 . C . PASS END=117617737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,9:68:53:68:0,53,1637:0,53,255:40,0 chr1 117617738 . C . PASS END=117617742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,5:66:92:65:0,92,1800:0,92,255:40,0 chr1 117617743 . A . PASS END=117618029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:35:0,80,1070:0,80,255:40,0 chr1 117618030 . C . PASS END=117618036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,101,255:35,0 chr1 117618037 . A . PASS END=117618037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:28,0 chr1 117618038 . G . PASS END=117618050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 117618051 . A . PASS END=117618051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1040:0,54,255:26,0 chr1 117618052 . C . PASS END=117618055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 117618056 . G . PASS END=117618057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:26,0 chr1 117618058 . G . PASS END=117618061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1208:0,83,255:28,0 chr1 117618062 . A . PASS END=117618062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:26,0 chr1 117618063 . C . PASS END=117618065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 117618066 . A . PASS END=117618066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:26,0 chr1 117618067 . C T, 48.38 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=0.022;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:11,3,0:6,9,0:47:83,0,50,429,550,980:255,0,255:16,0:4.8380e+01,8.4907e-05,5.3000e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,6,6:9,8,5,7 chr1 117618068 . T . PASS END=117618068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117618069 . G . PASS END=117618093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,939:0,64,255:26,0 chr1 117618094 . G . PASS END=117618097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 117618098 . G . PASS END=117618099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 117618100 . C . PASS END=117618101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117618102 . C . PASS END=117618104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 117618105 . G . PASS END=117618140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 117618141 . A . PASS END=117618141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 117618142 . T . PASS END=117618165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 117618166 . C . PASS END=117618167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 117618168 . G . PASS END=117618171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 117618172 . G . PASS END=117618172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 117618173 . C . PASS END=117618175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 117618176 . G . PASS END=117618438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:28:0,81,1086:0,84,255:40,0 chr1 117618439 . A . PASS END=117618445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 117618446 . C . PASS END=117618451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 117618452 . T . PASS END=117618481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,878:0,72,255:24,0 chr1 117618802 . A . PASS END=117618911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:32:0,96,1202:0,96,255:40,0 chr1 117618912 . G . PASS END=117618912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1160:0,66,255:31,0 chr1 117618913 . C . PASS END=117618914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:28,0 chr1 117618915 . A . PASS END=117618916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:25,0 chr1 117619263 . G . PASS END=117619264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 117619265 . A . PASS END=117619266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 117619267 . T . PASS END=117619267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 117619268 . A . PASS END=117619319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:29:0,82,1034:0,82,255:33,0 chr1 117619320 . C . PASS END=117619330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 117619331 . C . PASS END=117619331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 117619332 . C . PASS END=117619355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,64,255:24,0 chr1 117619356 . T . PASS END=117619356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 117619357 . T . PASS END=117619365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 117619366 . T . PASS END=117619369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 117619370 . A . PASS END=117619383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 117619384 . T . PASS END=117619415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 117619416 . C . PASS END=117619416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 117619417 . T . PASS END=117619417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 117619418 . G . PASS END=117619418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 117619419 . C . PASS END=117619430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 117619431 . G . PASS END=117619431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 117619432 . T . PASS END=117619434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:16,0 chr1 117619435 . G . PASS END=117619435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 117619436 . T . PASS END=117619441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:18,0 chr1 117619442 . C . PASS END=117619445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 117620517 . G . PASS END=117620655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:31:0,80,1109:0,80,255:40,0 chr1 117620656 . C . PASS END=117620656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 117620657 . G . PASS END=117620657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117620658 . G . PASS END=117620658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 117620659 . G . PASS END=117620665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 117622190 . G . PASS END=117622248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,152,255:40,0 chr1 117622249 . G . PASS END=117622271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,146,255:40,0 chr1 117624450 . C . PASS END=117624569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:31:0,93,1089:0,93,255:40,0 chr1 117626640 . A . PASS END=117626640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 117626641 . C . PASS END=117626642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 117626643 . C . PASS END=117626790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:32:0,86,1121:0,86,255:40,0 chr1 117629039 . C . PASS END=117629144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:43:0,115,1623:0,115,255:40,0 chr1 117630530 . A . PASS END=117630592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:38:0,91,1492:0,91,255:40,0 chr1 117631423 . G . PASS END=117631428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1188:0,93,255:32,0 chr1 117631429 . T . PASS END=117631447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1180:0,89,255:35,0 chr1 117631448 . T . PASS END=117631448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:34,0 chr1 117631449 . A . PASS END=117631450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,105,1575:0,108,255:38,0 chr1 117631451 . C . PASS END=117631451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:38,0 chr1 117631452 . C . PASS END=117631597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1305:0,98,255:40,0 chr1 117631598 . T . PASS END=117631598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 117631599 . G . PASS END=117631604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 117632677 . G . PASS END=117632678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 117632679 . T . PASS END=117632679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:23,0 chr1 117632680 . T . PASS END=117632692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr1 117632693 . C . PASS END=117632696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:31,0 chr1 117632697 . T . PASS END=117632697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:30,0 chr1 117632698 . T . PASS END=117632701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1060:0,93,255:31,0 chr1 117632702 . G . PASS END=117632702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 117632703 . A . PASS END=117632825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:34:0,89,1219:0,89,255:40,0 chr1 117632826 . C . PASS END=117632826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1260:0,72,255:33,0 chr1 117632827 . T . PASS END=117632830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1327:0,95,255:34,0 chr1 117633154 . G . PASS END=117633184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:83:0,120,1800:0,218,255:40,0 chr1 117633185 . A . PASS END=117633245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:77:0,120,1800:0,210,255:40,0 chr1 117633950 . G . PASS END=117634032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,102,1530:0,102,255:40,0 chr1 117634439 . T . PASS END=117634572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:35:0,96,1333:0,100,255:40,0 chr1 117635353 . G . PASS END=117635376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,881:0,78,255:26,0 chr1 117635377 . G . PASS END=117635386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr1 117635387 . T . PASS END=117635397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,954:0,67,255:26,0 chr1 117635398 . C . PASS END=117635398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 117635399 . T . PASS END=117635399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 117635400 . G . PASS END=117635400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117635401 . G . PASS END=117635401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:26,0 chr1 117635402 . A . PASS END=117635407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 117635408 . A . PASS END=117635408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 117635409 . G . PASS END=117635494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1148:0,83,255:40,0 chr1 117635495 . T . PASS END=117635495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 117635496 . T . PASS END=117635497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117635498 . T . PASS END=117635498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 117635499 . T . PASS END=117635500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 117635501 . A . PASS END=117635519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 117635520 . C . PASS END=117635520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr1 117635521 . A . PASS END=117635523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 117637931 . A . PASS END=117637965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,126,255:40,0 chr1 117637966 . A G, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.565;ReadPosRankSum=-0.692;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,32,0:0.542,0.000:59:14,11,0:13,21,0:48:85,0,49,1142,958,2099:255,0,255:27,0:5.0000e+01,6.8598e-05,5.2387e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,13,13,19:11,16,16,16 chr1 117637967 . A . PASS END=117637989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:56:0,120,1800:0,133,255:40,0 chr1 117638771 . T . PASS END=117638772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 117638773 . T . PASS END=117638773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,911:0,45,255:27,0 chr1 117638774 . C . PASS END=117638775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 117638776 . T . PASS END=117638776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 117638777 . T . PASS END=117638907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1186:0,83,255:40,0 chr1 117638908 . C . PASS END=117638921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,900:0,71,255:26,0 chr1 117639973 . G . PASS END=117640055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:41:0,84,1459:0,84,255:40,0 chr1 117641455 . G . PASS END=117641529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,140,255:40,0 chr1 117644002 . A . PASS END=117644146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,108,1473:0,108,255:40,0 chr1 117654927 . T . PASS END=117654939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,785:0,63,255:23,0 chr1 117654940 . G . PASS END=117655028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1133:0,83,255:40,0 chr1 117655029 . A . PASS END=117655040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:26:0,66,990:0,78,255:26,0 chr1 117655041 . G . PASS END=117655041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 117655042 . C . PASS END=117655044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 117655045 . T . PASS END=117655056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,712:0,44,255:19,0 chr1 117655057 . C . PASS END=117655057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:16,0 chr1 117655058 . C . PASS END=117655058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 117655059 . A . PASS END=117655059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 117655060 . C . PASS END=117655075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:13,0 chr1 117655981 . C . PASS END=117656101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:39:0,90,1350:0,100,255:40,0 chr1 117656102 . C . PASS END=117656107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:33:0,60,900:0,99,255:23,0 chr1 117658197 . C . PASS END=117658311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:97:37:0,97,1368:0,97,255:40,0 chr1 117659238 . C . PASS END=117659238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 117659239 . T . PASS END=117659239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 117659240 . G . PASS END=117659280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,807:0,66,255:25,0 chr1 117659281 . C . PASS END=117659296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 117659297 . G . PASS END=117659297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 117659298 . A . PASS END=117659299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 117659300 . T . PASS END=117659301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 117659302 . C . PASS END=117659312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 117659313 . T . PASS END=117659315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 117659316 . T . PASS END=117659316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:24,0 chr1 117659317 . T . PASS END=117659327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:27:0,73,924:0,73,255:26,0 chr1 117659328 . G . PASS END=117659328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:24,0 chr1 117659329 . T . PASS END=117659345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,781:0,65,255:25,0 chr1 117659346 . T . PASS END=117659357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:21:0,42,630:0,56,255:19,0 chr1 117659358 . C . PASS END=117659358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,629:0,8,255:13,0 chr1 117659359 . T . PASS END=117659364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:14,0 chr1 117659365 . G . PASS END=117659366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 117659367 . T . PASS END=117659367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 117660656 . C . PASS END=117660657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 117660658 . T . PASS END=117660658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,760:0,42,255:21,0 chr1 117660659 . C . PASS END=117660660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 117660661 . C . PASS END=117660661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 117660662 . C . PASS END=117660672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,903:0,75,255:26,0 chr1 117660673 . C . PASS END=117660674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 117660675 . T . PASS END=117660675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 117660676 . T . PASS END=117660676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 117660677 . T . PASS END=117660677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 117660678 . G . PASS END=117660848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1090:0,84,255:40,0 chr1 117660849 . G . PASS END=117660849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:33,0 chr1 117660850 . A . PASS END=117660884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1185:0,80,255:33,0 chr1 117660885 . G . PASS END=117660885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 117660886 . G . PASS END=117660985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1065:0,80,255:35,0 chr1 117660986 . G . PASS END=117660986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 117660987 . C . PASS END=117661007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1263:0,89,255:34,0 chr1 117661008 . C . PASS END=117661008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:38:35:0,38,956:0,38,255:28,0 chr1 117661009 . T . PASS END=117661062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1099:0,85,255:33,0 chr1 117661063 . G . PASS END=117661063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1123:0,58,255:29,0 chr1 117661064 . C . PASS END=117661070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1123:0,80,255:30,0 chr1 117661071 . T . PASS END=117661071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 117661072 . C . PASS END=117661084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1119:0,82,255:31,0 chr1 117661085 . C . PASS END=117661085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr1 117661086 . A . PASS END=117661118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:34,0 chr1 117661119 . C . PASS END=117661119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 117661120 . T . PASS END=117661133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1280:0,102,255:34,0 chr1 117661134 . G . PASS END=117661134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr1 117661135 . T . PASS END=117661147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1169:0,80,255:31,0 chr1 117661148 . C . PASS END=117661148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 117661149 . T . PASS END=117661237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1162:0,86,255:35,0 chr1 117661238 . A . PASS END=117661238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 117661239 . A . PASS END=117661355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1125:0,80,255:35,0 chr1 117661356 . C . PASS END=117661389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,900:0,61,255:26,0 chr1 117663336 . C . PASS END=117663342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 117663343 . C . PASS END=117663351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 117663352 . A . PASS END=117663352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 117663353 . G . PASS END=117663354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr1 117663355 . A . LowGQ END=117663355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:7,0 chr1 117663356 . G . PASS END=117663368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 117663369 . G . PASS END=117663393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 117663394 . C . PASS END=117663421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:19,0 chr1 117663422 . C . PASS END=117663441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:24,0 chr1 117663442 . C . PASS END=117663462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,934:0,81,255:31,0 chr1 117663463 . C . PASS END=117663463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 117663464 . A . PASS END=117663517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1117:0,80,255:32,0 chr1 117663518 . G . PASS END=117663518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr1 117663519 . T . PASS END=117663726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1247:0,86,255:38,0 chr1 117663727 . A . PASS END=117663727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:28,0 chr1 117663728 . G . PASS END=117663737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr1 117663738 . C . PASS END=117663738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 117663739 . A . PASS END=117663752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 117663753 . G . PASS END=117663753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 117663754 . A . PASS END=117663754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 117663755 . G . PASS END=117663755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 117663756 . T . PASS END=117663760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 117663761 . A . PASS END=117663777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,1022:0,68,255:26,0 chr1 117663778 . T . PASS END=117663779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 117663780 . A . PASS END=117663810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,840:0,64,255:24,0 chr1 117663811 . T . PASS END=117663811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 117663812 . G . PASS END=117663823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 117664421 . C . PASS END=117664476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,573:0,40,255:19,0 chr1 117664477 . C . PASS END=117664477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 117664478 . A . PASS END=117664482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 117664483 . G . PASS END=117664484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 117664485 . A . PASS END=117664486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 117690280 . T . PASS END=117690309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:30:0,82,1119:0,82,255:40,0 chr1 117690310 . C . PASS END=117690382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:36:0,93,1395:0,108,255:40,0 chr1 117690383 . C . PASS END=117690383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:30,0 chr1 117690384 . T . PASS END=117690389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:31,0 chr1 117690390 . T . PASS END=117690390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:27,0 chr1 117690391 . T . PASS END=117690395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 117690396 . T . PASS END=117690396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 117690397 . C . PASS END=117690404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 117695713 . C . PASS END=117695717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:26,0 chr1 117695718 . A . PASS END=117695727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,993:0,81,255:30,0 chr1 117695728 . C . PASS END=117695728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 117695729 . C . PASS END=117695734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1113:0,93,255:31,0 chr1 117695735 . T . PASS END=117695735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 117695736 . G . PASS END=117695740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 117695741 . G . PASS END=117695741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 117695742 . G . PASS END=117695743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 117695744 . A . PASS END=117695744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 117695745 . A . PASS END=117695745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 117695746 . T . PASS END=117695746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:28,0 chr1 117695747 . G . PASS END=117695855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1189:0,81,255:40,0 chr1 117695856 . A . PASS END=117695856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 117695857 . C . PASS END=117695859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 117695860 . C . PASS END=117695860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 117695861 . C . PASS END=117695887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 117695888 . G . PASS END=117695888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 117695889 . G . PASS END=117695889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 117695890 . A . PASS END=117695905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,61,255:24,0 chr1 117695906 . G . PASS END=117695926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,53,255:19,0 chr1 117695927 . A . PASS END=117695927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:13,0 chr1 117695928 . G . PASS END=117695931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 117695932 . C . PASS END=117695937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 117695938 . G . PASS END=117695938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 117695939 . C . PASS END=117695973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:13,0 chr1 117695974 . C . PASS END=117695983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 117695984 . G . PASS END=117695984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 117695985 . C . LowGQ END=117695985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:8,0 chr1 117695986 . T . PASS END=117695986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 117695987 . G . LowGQ END=117695987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:7,0 chr1 117695988 . A . PASS END=117695988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 117695989 . A . PASS END=117695990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:14:10:0,14,270:0,14,255:7,0 chr1 117695991 . G . PASS END=117695991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 117699196 . C . PASS END=117699199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,931:0,64,255:26,0 chr1 117699200 . A . PASS END=117699200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 117699201 . G . PASS END=117699201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 117699202 . T . PASS END=117699202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1101:0,90,255:30,0 chr1 117699203 . T . PASS END=117699203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 117699204 . T . PASS END=117699207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 117699208 . A . PASS END=117699208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:29,0 chr1 117699209 . C . PASS END=117699596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:33:0,83,1099:0,83,255:40,0 chr1 117699599 . C . PASS END=117699633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:33:0,88,1203:0,88,255:38,0 chr1 117712729 . C . PASS END=117712757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:73:0,120,1800:0,173,255:40,0 chr1 117712758 . A G, 48.06 PASS DP=82;MQ=248.94;MQRankSum=7.275;ReadPosRankSum=5.062;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,35,0:0.427,0.000:82:20,22,0:27,13,0:47:83,0,50,1222,1664,2886:255,0,255:40,0:4.8059e+01,8.9566e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,24,18,17:22,25,21,14 chr1 117712759 . T . PASS END=117712793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:64:0,120,1800:0,182,255:40,0 chr1 117714517 . C . PASS END=117714558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,89,255:38,0 chr1 117714559 . T . PASS END=117714563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,92,255:26,0 chr1 117723042 . C . PASS END=117723223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:93:38:0,93,1395:0,108,255:40,0 chr1 117753446 . C . PASS END=117753477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,99,1252:0,102,255:36,0 chr1 117910806 . A . PASS END=117910807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 117910808 . G . PASS END=117910814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:25,0 chr1 117910815 . C . PASS END=117910815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 117910816 . C . PASS END=117910830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr1 117910831 . T . PASS END=117910864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1017:0,84,255:36,0 chr1 117910865 . G . PASS END=117910865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1263:0,64,255:34,0 chr1 117910866 . C . PASS END=117910910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:36:0,94,1304:0,94,255:40,0 chr1 117910911 . A . PASS END=117910911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1354:0,60,255:40,0 chr1 117910912 . A . PASS END=117911066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,108,1521:0,109,255:40,0 chr1 117911067 . G . PASS END=117911067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:33,0 chr1 117911068 . G . PASS END=117911088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,83,255:33,0 chr1 117911089 . C . PASS END=117911094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,70,255:26,0 chr1 117911095 . A . PASS END=117911107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:19:0,51,765:0,57,255:18,0 chr1 117944808 . G . PASS END=117945058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:84:41:0,84,1446:0,84,255:40,0 chr1 117945059 . A . PASS END=117945059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1313:0,68,255:37,0 chr1 117945060 . A . PASS END=117945063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1385:0,106,255:38,0 chr1 117948171 . A . PASS END=117948267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:86:33:0,86,1241:0,86,255:40,0 chr1 117957335 . G . PASS END=117957453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:83:40:0,83,1393:0,83,255:40,0 chr1 117963191 . A . PASS END=117963271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,140,255:40,0 chr1 117984853 . A . PASS END=117984947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:59:0,120,1800:0,167,255:40,0 chr1 118003111 . T . PASS END=118003234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,110,1557:0,110,255:40,0 chr1 118008956 . G . PASS END=118009049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,102,1530:0,113,255:40,0 chr1 118035769 . A . PASS END=118035884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,130,255:40,0 chr1 118039385 . G . PASS END=118039604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:98:38:0,98,1349:0,98,255:40,0 chr1 118042004 . C . PASS END=118042007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 118042008 . A . PASS END=118042010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 118042011 . G . PASS END=118042012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 118042013 . T . PASS END=118042015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 118042016 . G . PASS END=118042155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,980:0,84,255:40,0 chr1 118042156 . T . PASS END=118042176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:26,0 chr1 118045477 . G . PASS END=118045592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,102,1530:0,110,255:40,0 chr1 118057471 . T . PASS END=118057474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:75:0,120,1800:0,192,255:40,0 chr1 118065447 . A . PASS END=118065448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,915:0,75,255:26,0 chr1 118065449 . A . PASS END=118065579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,926:0,81,255:40,0 chr1 118065872 . A . PASS END=118065879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,230,255:40,0 chr1 118067711 . G . PASS END=118067781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1121:0,85,255:40,0 chr1 118165491 . A . PASS END=118165494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr1 118165495 . C . PASS END=118165502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:29,0 chr1 118165503 . A . PASS END=118165503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 118165504 . G . PASS END=118165504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 118165505 . C . PASS END=118165505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 118165506 . A . PASS END=118165649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1094:0,80,255:40,0 chr1 118165650 . A . PASS END=118165652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr1 118165653 . G . PASS END=118165690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1133:0,90,255:32,0 chr1 118165691 . C . PASS END=118165691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 118165692 . G . PASS END=118165736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1241:0,86,255:39,0 chr1 118165737 . G . PASS END=118165737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:34,0 chr1 118165738 . A . PASS END=118165979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:37:0,95,1316:0,95,255:40,0 chr1 118165980 . A . PASS END=118165980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1301:0,73,255:37,0 chr1 118165981 . A . PASS END=118166157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:40:0,83,1413:0,83,255:40,0 chr1 118166158 . T . PASS END=118166194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:43:0,94,1620:0,94,255:40,0 chr1 118166195 . C T, 43.49 PASS DP=44;MQ=250.00;MQRankSum=5.453;ReadPosRankSum=4.453;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,16,0:0.364,0.000:44:16,7,0:12,9,0:43:78,0,50,543,973,1516:255,0,255:27,0:4.3487e+01,2.1641e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,8,8:12,16,5,11 chr1 118166196 . C . PASS END=118166232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,102,1590:0,102,255:40,0 chr1 118166233 . G . PASS END=118166477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1305:0,81,255:40,0 chr1 118166478 . C . PASS END=118166478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1255:0,64,255:29,0 chr1 118166479 . T . PASS END=118166480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:32,0 chr1 118166481 . A . PASS END=118166482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:72:35:0,72,1107:0,72,255:30,0 chr1 118166483 . C . PASS END=118166483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1061:0,17,255:27,0 chr1 118166484 . C . PASS END=118166484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1194:0,61,255:30,0 chr1 118166485 . T . PASS END=118166580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:33:0,90,1302:0,92,255:40,0 chr1 118166581 . G . PASS END=118166581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 118166582 . T . PASS END=118166608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 118166609 . T . PASS END=118166609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 118166610 . G . PASS END=118166614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1103:0,90,255:30,0 chr1 118166615 . T . PASS END=118166631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,74,255:25,0 chr1 118166632 . G . PASS END=118166663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,643:0,48,255:19,0 chr1 118166664 . T . PASS END=118166664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:16,0 chr1 118166665 . A . PASS END=118166666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 118413191 . T . PASS END=118413238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,107,1605:0,107,255:40,0 chr1 118420260 . C . PASS END=118420463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,99,1578:0,99,255:40,0 chr1 118420586 . T . PASS END=118420744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:32:0,84,1260:0,96,255:40,0 chr1 118420745 . A . PASS END=118420745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:27,0 chr1 118420746 . G . PASS END=118420746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 118420747 . A . PASS END=118420752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 118420753 . T . PASS END=118420764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:23,0 chr1 118420765 . A . PASS END=118420774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:16,0 chr1 118424445 . C . PASS END=118424499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:99:0,120,1800:0,255,255:40,0 chr1 118426110 . T . PASS END=118426231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:83:31:0,83,1170:0,83,255:40,0 chr1 118426232 . A . PASS END=118426240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1111:0,77,255:27,0 chr1 118426241 . T . PASS END=118426242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 118426243 . A . PASS END=118426243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 118426244 . G . PASS END=118426244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 118426245 . A . PASS END=118426245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,897:0,53,255:26,0 chr1 118426246 . G . PASS END=118426247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 118426248 . G . PASS END=118426248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr1 118426249 . C . PASS END=118426249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 118429199 . C . PASS END=118429275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:88:48:0,88,1710:0,88,255:40,0 chr1 118430320 . C . PASS END=118430396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,159,255:40,0 chr1 118439455 . T . PASS END=118439547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:33:0,90,1327:0,99,255:40,0 chr1 118439548 . A . PASS END=118439548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1612:0,61,255:40,0 chr1 118439549 . A . PASS END=118439553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,121,255:40,0 chr1 118439554 . T . PASS END=118439554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1607:0,64,255:40,0 chr1 118439555 . G . PASS END=118439572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:41:0,84,1377:0,84,255:40,0 chr1 118439573 . G . PASS END=118439573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:31,0 chr1 118439574 . A . PASS END=118439576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1305:0,84,255:31,0 chr1 118439577 . A . PASS END=118439586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:63:34:0,63,1080:0,63,255:28,0 chr1 118439587 . C . PASS END=118439588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:32:0,44,1064:0,44,255:25,0 chr1 118439589 . T . PASS END=118439590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:24,0 chr1 118439591 . C . PASS END=118439591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:24,0 chr1 118439592 . A . PASS END=118439593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 118439594 . C . PASS END=118439594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:25,0 chr1 118439595 . C . PASS END=118439595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:23,0 chr1 118439596 . T . PASS END=118439602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,911:0,45,255:24,0 chr1 118439603 . C . PASS END=118439603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 118439604 . T . PASS END=118439605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,812:0,42,255:19,0 chr1 118439606 . G . PASS END=118439606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:19,0 chr1 118439607 . G . PASS END=118439609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:22:0,54,810:0,66,255:18,0 chr1 118439610 . A . PASS END=118439611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 118441679 . C . PASS END=118441838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:39:0,95,1530:0,95,255:40,0 chr1 118449128 . C . PASS END=118449165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:77:0,120,1800:0,217,255:40,0 chr1 118449166 . T . PASS END=118449202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:75:0,120,1800:0,186,255:40,0 chr1 118449203 . G C, 49.76 PASS DP=72;MQ=250.00;MQRankSum=7.281;ReadPosRankSum=1.179;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,34,0:0.472,0.000:72:17,17,0:21,17,0:48:85,0,50,1208,1314,2522:255,0,255:31,0:4.9764e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,21,11,23:22,16,20,14 chr1 118449204 . C . PASS END=118449204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,206,255:40,0 chr1 118454616 . G . PASS END=118454704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:44:0,116,1598:0,116,255:40,0 chr1 118455152 . T . PASS END=118455153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 118455154 . T . PASS END=118455165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1003:0,81,255:31,0 chr1 118455166 . T . PASS END=118455166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 118455167 . A . PASS END=118455169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 118455170 . T . PASS END=118455170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 118455171 . T . PASS END=118455173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 118455174 . T . PASS END=118455174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 118455175 . G . PASS END=118455305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1025:0,93,255:40,0 chr1 118461219 . C . PASS END=118461331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,102,1530:0,140,255:40,0 chr1 118461332 . C . PASS END=118461339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:39:0,69,1035:0,117,255:25,0 chr1 118461340 . T . PASS END=118461340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,120,255:27,0 chr1 118461341 . A . PASS END=118461358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,978:0,78,255:26,0 chr1 118462805 . C . PASS END=118462964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:89:33:0,89,1214:0,89,255:40,0 chr1 118462965 . C . PASS END=118462980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:24,0 chr1 118475943 . A . PASS END=118475947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:32,0 chr1 118475948 . G . PASS END=118475948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:31,0 chr1 118475949 . C . PASS END=118476113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:86:33:0,86,1202:0,86,255:40,0 chr1 118476253 . G . PASS END=118476256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,195,255:40,0 chr1 118476257 . A . PASS END=118476305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,170,255:40,0 chr1 118477096 . A . PASS END=118477109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,553:0,45,255:17,0 chr1 118477110 . G . PASS END=118477110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 118477111 . G . PASS END=118477129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 118477130 . C . PASS END=118477148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr1 118477149 . A . PASS END=118477149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 118477150 . G . PASS END=118477150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 118477151 . A . PASS END=118477151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 118477152 . T . PASS END=118477152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 118477153 . G . PASS END=118477153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 118477154 . G . PASS END=118477157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 118477158 . A . PASS END=118477158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 118477159 . C . PASS END=118477159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 118477160 . A . PASS END=118477250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1146:0,86,255:34,0 chr1 118477251 . T . PASS END=118477264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:27:0,60,947:0,60,255:26,0 chr1 118477265 . A . PASS END=118477265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:21,0 chr1 118477266 . G . PASS END=118477269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,65,255:22,0 chr1 118477270 . G . PASS END=118477270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 118477271 . A . PASS END=118477276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 118477277 . T . PASS END=118477277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 118477278 . A . PASS END=118477290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 118477291 . G . PASS END=118477291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 118477292 . C . PASS END=118477294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 118477295 . C . PASS END=118477305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:19,0 chr1 118479392 . G . PASS END=118479510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,108,1529:0,109,255:40,0 chr1 118481103 . T . PASS END=118481181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,126,255:40,0 chr1 118482100 . G . PASS END=118482101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,137,255:40,0 chr1 118482102 . A . PASS END=118482102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,7:57:55:57:0,55,1633:0,55,255:40,0 chr1 118482103 . T . PASS END=118482107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,154,255:40,0 chr1 118482108 . G . PASS END=118482195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:90:37:0,90,1350:0,94,255:40,0 chr1 118483450 . A . PASS END=118483563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,120,1800:0,128,255:40,0 chr1 118483747 . C . PASS END=118483848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:42:0,87,1422:0,87,255:40,0 chr1 118484373 . G . PASS END=118484470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:76:0,120,1800:0,212,255:40,0 chr1 118485060 . A . PASS END=118485167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:32:0,83,1075:0,83,255:40,0 chr1 118486019 . G . PASS END=118486201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:33:0,86,1199:0,86,255:40,0 chr1 118486202 . T . PASS END=118486202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1314:0,70,255:30,0 chr1 118486203 . A . PASS END=118486236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1186:0,83,255:34,0 chr1 118486237 . A . PASS END=118486237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:30,0 chr1 118486238 . A . PASS END=118486245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 118486246 . A . PASS END=118486246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 118486247 . C . PASS END=118486249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 118488709 . G . PASS END=118488800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,110,1535:0,110,255:40,0 chr1 118488801 . A . PASS END=118488801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1289:0,73,255:35,0 chr1 118488802 . G . PASS END=118488802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 118491028 . A . PASS END=118491064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,102,1636:0,102,255:40,0 chr1 118491065 . A . PASS END=118491101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,133,255:40,0 chr1 118491102 . G A, 49.62 PASS DP=50;MQ=249.78;MQRankSum=5.459;ReadPosRankSum=1.573;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,23,0:0.469,0.000:49:12,17,0:14,6,0:48:84,0,50,794,922,1715:255,0,255:22,0:4.9624e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,8,15:10,16,8,15 chr1 118491103 . T . PASS END=118491115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,99,1485:0,113,255:40,1 chr1 118491116 . T . PASS END=118491116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1330:0,70,255:31,0 chr1 118491117 . C . PASS END=118491129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:33:0,90,1350:0,99,255:33,0 chr1 118492374 . C . PASS END=118492459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:58:0,120,1800:0,144,255:40,0 chr1 118492618 . A . PASS END=118492753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,120,1800:0,146,255:40,0 chr1 118493457 . T . PASS END=118493513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,160,255:40,0 chr1 118494599 . G . PASS END=118494699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,146,255:40,0 chr1 118494920 . T . PASS END=118495031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:56:0,120,1800:0,168,255:40,0 chr1 118495151 . G . PASS END=118495152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1239:0,86,255:32,0 chr1 118495153 . T G, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=-0.763;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,19,0:0.559,0.000:34:10,8,0:5,11,0:48:85,0,49,677,532,1209:255,0,255:15,0:5.0000e+01,7.0928e-05,5.1978e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,9,10:5,10,8,11 chr1 118495154 . C . PASS END=118495188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1294:0,89,255:35,0 chr1 118495189 . C . PASS END=118495189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 118495190 . A . PASS END=118495190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 118495191 . G . PASS END=118495279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:35:0,92,1324:0,92,255:40,0 chr1 118495280 . G . PASS END=118495280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:31,0 chr1 118495281 . A . PASS END=118495285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:92:34:0,92,1310:0,92,255:34,0 chr1 118495569 . G . PASS END=118495619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:84:0,120,1800:0,236,255:40,0 chr1 118496099 . G . PASS END=118496164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,130,255:40,0 chr1 118496630 . G . PASS END=118496722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:71:0,120,1800:0,193,255:40,0 chr1 118497203 . G . PASS END=118497250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:59:0,120,1800:0,138,255:40,0 chr1 118497938 . C . PASS END=118497981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,169,255:40,0 chr1 118499691 . T . PASS END=118499819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:94:34:0,94,1212:0,94,255:40,0 chr1 118501533 . G . PASS END=118501626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:48:0,106,1739:0,106,255:40,0 chr1 118501915 . G . PASS END=118502070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:91:33:0,91,1189:0,91,255:40,0 chr1 118506422 . C . PASS END=118506561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,114,1710:0,134,255:40,0 chr1 118509221 . T . PASS END=118509375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1220:0,92,255:40,0 chr1 118509376 . C . PASS END=118509376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 118512679 . A . PASS END=118512739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,160,255:40,0 chr1 118514486 . C . PASS END=118514505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:33:0,99,1241:0,99,255:39,0 chr1 118514506 . A . PASS END=118514506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1211:0,67,255:36,0 chr1 118514507 . T . PASS END=118514639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,111,1413:0,117,255:40,0 chr1 118514640 . T . PASS END=118514670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:40:0,90,1350:0,98,255:40,0 chr1 118516048 . C . PASS END=118516053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 118516054 . A . PASS END=118516054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 118516055 . A . PASS END=118516081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:90:31:0,90,1350:0,93,255:40,0 chr1 118516082 . A T, 49.97 PASS DP=53;MQ=250.00;MQRankSum=6.236;ReadPosRankSum=5.133;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,26,0:0.491,0.000:53:13,16,0:14,10,0:48:85,0,50,930,958,1888:255,0,255:27,0:4.9971e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,17,9:13,14,13,13 chr1 118516083 . G . PASS END=118516119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,149,255:40,0 chr1 118516120 . T . PASS END=118516143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,169,255:40,0 chr1 118516144 . G . PASS END=118516180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,135,255:40,0 chr1 118516181 . G C, 49.02 PASS DP=47;MQ=250.00;MQRankSum=5.831;ReadPosRankSum=2.364;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,21,0:0.447,0.000:47:11,12,0:15,9,0:48:84,0,50,750,930,1680:255,0,255:24,0:4.9020e+01,7.6105e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,16,9,12:15,11,12,9 chr1 118516182 . C . PASS END=118516184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,114,1710:0,135,255:40,0 chr1 118523893 . C . PASS END=118524024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,112,1360:0,112,255:40,0 chr1 118526434 . C . PASS END=118526536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:78:0,120,1800:0,233,255:40,0 chr1 118527306 . C . PASS END=118527405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:62:0,120,1800:0,185,255:40,0 chr1 118530457 . C . PASS END=118530504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:77:0,120,1800:0,198,255:40,0 chr1 118530728 . C . PASS END=118530827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,143,255:40,0 chr1 118533484 . C . PASS END=118533529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:126,0:126:99:114:0,120,1800:0,255,255:40,0 chr1 118534038 . C . PASS END=118534151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,129,255:40,0 chr1 118535089 . C . PASS END=118535131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:25,0 chr1 118535132 . A . PASS END=118535227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1002:0,81,255:40,0 chr1 118535228 . C . PASS END=118535249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:24,0 chr1 118535250 . A . PASS END=118535250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,797:0,56,255:20,0 chr1 118535251 . C . PASS END=118535262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 118535263 . A . PASS END=118535263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 118535264 . G . PASS END=118535270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 118535271 . T . PASS END=118535271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 118537029 . C . PASS END=118537153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,108,1620:0,110,255:40,0 chr1 118538993 . C . PASS END=118539123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:50:0,120,1800:0,133,255:40,0 chr1 118539221 . C . PASS END=118539366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,101,1800:0,101,255:40,4 chr1 118548037 . C . PASS END=118548196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,1009:0,80,255:40,0 chr1 118548197 . T . PASS END=118548197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:28,0 chr1 118548198 . A . PASS END=118548206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,94,255:30,0 chr1 118548207 . C . PASS END=118548207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr1 118548208 . T . PASS END=118548214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 118548215 . G . PASS END=118548225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,68,255:26,0 chr1 118550667 . C . PASS END=118550793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1164:0,93,255:40,0 chr1 118550794 . T . PASS END=118550806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 118550807 . T . PASS END=118550821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:18:0,45,675:0,45,255:19,0 chr1 118554851 . T . PASS END=118554995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,120,1800:0,134,255:40,0 chr1 118558588 . C . PASS END=118558805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1286:0,81,255:40,0 chr1 118565927 . C . PASS END=118565952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1117:0,80,255:40,0 chr1 118565953 . G A,T, 48.47 PASS DP=47;MQ=249.83;FractionInformativeReads=0.979 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,19,0,0:0.413,0.000,0.000:46:11,11,0,0:16,8,0,0:46:83,0,47,637,1003,684,1103,1103,1103,1103:255,0,255:27,0:4.8467e+01,1.0536e-04,5.0000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78,34.77,69.54,69.54,37.78:18,9,6,13:14,13,8,11 chr1 118565954 . G . PASS END=118565990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,137,255:40,0 chr1 118565991 . C . PASS END=118566075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:35:0,81,1215:0,84,255:40,0 chr1 118566076 . G . PASS END=118566080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:65:32:0,65,1007:0,65,255:26,0 chr1 118566081 . G . PASS END=118566081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:24,0 chr1 118566082 . A . PASS END=118566086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr1 118567861 . C . PASS END=118567861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 118567862 . T . PASS END=118567862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 118567863 . G . PASS END=118567869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 118567870 . T . PASS END=118567870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 118567871 . C . PASS END=118567880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:31,0 chr1 118567881 . T . PASS END=118567881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 118567882 . A . PASS END=118567882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 118567883 . T . PASS END=118567883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:29,0 chr1 118567884 . A . PASS END=118567885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 118567886 . T . PASS END=118567886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1008:0,49,255:30,0 chr1 118567887 . T . PASS END=118567897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1201:0,86,255:34,0 chr1 118567898 . C . PASS END=118567898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:33,0 chr1 118567899 . C . PASS END=118567985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:35:0,95,1256:0,95,255:40,0 chr1 118567986 . A . PASS END=118567986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:35,0 chr1 118567987 . G . PASS END=118567998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,98,255:35,0 chr1 118567999 . C . PASS END=118567999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:30,0 chr1 118568000 . A . PASS END=118568002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 118568003 . A . PASS END=118568003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1259:0,77,255:29,0 chr1 118568004 . T . PASS END=118568016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,91,255:31,0 chr1 118568017 . T . PASS END=118568032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,74,255:26,0 chr1 118568033 . T . PASS END=118568033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:19,0 chr1 118568034 . A . PASS END=118568035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 118568036 . T . PASS END=118568036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:19,0 chr1 118568037 . G . PASS END=118568039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 118570897 . C . PASS END=118570915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,968:0,84,255:33,0 chr1 118570916 . G . PASS END=118570917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:33,0 chr1 118570918 . A . PASS END=118570918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1318:0,102,255:34,0 chr1 118570919 . A . PASS END=118570919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:33,0 chr1 118570920 . G . PASS END=118571003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:34:0,87,1181:0,87,255:40,0 chr1 118571004 . T . PASS END=118571004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1206:0,75,255:35,0 chr1 118571005 . C . PASS END=118571017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1211:0,88,255:35,0 chr1 118574315 . C . PASS END=118574475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:31:0,84,1260:0,93,255:40,0 chr1 118574476 . C . PASS END=118574476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 118574477 . A . PASS END=118574477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 118574478 . G . PASS END=118574479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:23,0 chr1 118574480 . A . PASS END=118574480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 118574481 . T . PASS END=118574484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:20,0 chr1 118574485 . T . PASS END=118574485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,728:0,37,255:19,0 chr1 118574486 . A . PASS END=118574486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 118574487 . T . PASS END=118574490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:23:0,48,720:0,69,255:16,0 chr1 118579393 . C . PASS END=118579506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:38:0,99,1485:0,114,255:40,0 chr1 118581915 . C . PASS END=118581933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:96:0,120,1800:0,133,255:40,0 chr1 118581934 . C . PASS END=118581934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,16:106:23:106:0,23,2483:0,23,255:40,0 chr1 118581935 . T . PASS END=118582067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:74:0,120,1800:0,136,255:40,0 chr1 118583353 . C . PASS END=118583370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:49:0,120,1800:0,134,255:40,0 chr1 118583371 . T . PASS END=118583407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,148,255:40,0 chr1 118583408 . G A, 49.21 PASS DP=62;MQ=250.00;MQRankSum=6.726;ReadPosRankSum=5.807;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,28,0:0.452,0.000:62:17,14,0:17,14,0:48:84,0,50,999,1215,2214:255,0,255:31,0:4.9209e+01,7.3776e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,21,15,13:22,12,17,11 chr1 118583409 . T . PASS END=118583445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,147,255:40,0 chr1 118583446 . C . PASS END=118583464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,111,1665:0,114,255:40,0 chr1 118584426 . C . PASS END=118584665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:84:40:0,84,1260:0,105,255:40,0 chr1 118596625 . C . PASS END=118596716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:65:0,120,1800:0,187,255:40,0 chr1 118598356 . T . PASS END=118598385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:42:0,96,1421:0,96,255:40,0 chr1 118598386 . T . PASS END=118598386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1459:0,74,255:40,0 chr1 118598387 . A . PASS END=118598537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,120,1800:0,123,255:40,0 chr1 118609368 . C . PASS END=118609522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:95:38:0,95,1329:0,95,255:40,0 chr1 118616477 . C . PASS END=118616590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:66:0,120,1800:0,141,255:40,0 chr1 118617162 . C . PASS END=118617223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:71:0,120,1800:0,173,255:40,0 chr1 118617850 . C . PASS END=118617877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:88:0,120,1800:0,246,255:40,0 chr1 118623724 . C . PASS END=118623734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,151,255:40,0 chr1 118623735 . T . PASS END=118623942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:62:0,120,1800:0,146,255:40,0 chr1 118624038 . C . PASS END=118624228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:42:0,87,1535:0,87,255:40,1 chr1 118624229 . T . PASS END=118624229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:75:42:0,75,1354:0,75,255:35,1 chr1 118624230 . T . PASS END=118624265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:88:35:0,88,1332:0,88,255:37,0 chr1 118628545 . C . PASS END=118628695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:41:0,110,1557:0,110,255:40,0 chr1 118629294 . C . PASS END=118629407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,113,1567:0,113,255:40,2 chr1 118629494 . C . PASS END=118629631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:38:0,93,1395:0,107,255:40,0 chr1 118634229 . C . PASS END=118634341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:50:0,120,1800:0,150,255:40,0 chr1 118634553 . C . PASS END=118634625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,102,1530:0,114,255:40,0 chr1 118635779 . C . PASS END=118635940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:92:41:0,92,1413:0,92,255:40,0 chr1 118640293 . C . PASS END=118640474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:45:0,119,1651:0,119,255:40,0 chr1 118642229 . C . PASS END=118642423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:36:0,92,1294:0,92,255:40,0 chr1 118644363 . C . PASS END=118644383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:34:0,88,1258:0,88,255:40,0 chr1 118644384 . C . PASS END=118644384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:35:45:0,35,1166:0,35,255:39,0 chr1 118644385 . G . PASS END=118644392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,120,1800:0,127,255:40,0 chr1 118644393 . C . PASS END=118644429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,110,1800:0,110,255:40,0 chr1 118644430 . A G, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.182;ReadPosRankSum=5.088;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,30,0:0.566,0.000:53:9,16,0:14,14,0:46:85,0,46,185,185,185:255,0,255:22,0:5.0000e+01,9.7850e-05,4.9025e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,7,21,9:12,11,19,11 chr1 118644431 . T . PASS END=118644467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:47:0,82,1624:0,82,255:40,0 chr1 118644468 . G . PASS END=118644538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:34:0,90,1288:0,94,255:40,0 chr1 118644539 . T . PASS END=118644542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr1 118644543 . C . PASS END=118644543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 118644544 . T . PASS END=118644548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr1 118644549 . C . PASS END=118644549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 118657933 . C . PASS END=118658064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:84:61:0,84,1260:0,122,255:40,0 chr1 118693166 . C . PASS END=118693179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:61:0,120,1800:0,183,255:40,0 chr1 118693180 . G . PASS END=118693216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:86:0,120,1800:0,220,255:40,0 chr1 118693217 . T C, 48.53 PASS DP=92;MQ=250.00;MQRankSum=8.187;ReadPosRankSum=3.722;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,40,0:0.435,0.000:92:28,15,0:24,25,0:47:83,0,50,1430,1860,3290:255,0,255:40,0:4.8531e+01,8.2577e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,30,20,20:22,30,21,19 chr1 118693218 . G . PASS END=118693252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,164,255:40,0 chr1 118693852 . C . PASS END=118693982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:31:0,90,1060:0,90,255:40,0 chr1 118693983 . G . PASS END=118693983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:34,0 chr1 118693984 . C . PASS END=118693992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,105,1575:0,108,255:35,0 chr1 118727694 . C . PASS END=118727780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1078:0,84,255:40,0 chr1 119427355 . T . PASS END=119427372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:26,0 chr1 119427373 . C . PASS END=119427419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:34,0 chr1 119427420 . A . PASS END=119427420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:34,0 chr1 119427421 . A . PASS END=119427491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,83,255:35,0 chr1 119427492 . G . PASS END=119427492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 119427493 . G . PASS END=119427495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 119427496 . C . PASS END=119427496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:27,0 chr1 119427497 . T . PASS END=119427497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 119427498 . G . PASS END=119427498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 119427499 . C . PASS END=119427517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:33,0 chr1 119427518 . T . PASS END=119427518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1136:0,74,255:31,0 chr1 119427519 . T . PASS END=119427543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,87,255:34,0 chr1 119427544 . G . PASS END=119427544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:32,0 chr1 119427545 . C . PASS END=119427545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 119427546 . T . PASS END=119427546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1119:0,72,255:32,0 chr1 119427547 . T . PASS END=119427551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 119427552 . A . PASS END=119427552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1019:0,55,255:30,0 chr1 119427553 . G . PASS END=119427554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1247:0,86,255:34,0 chr1 119427555 . C . PASS END=119427555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1159:0,77,255:34,0 chr1 119427556 . G . PASS END=119427556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:34,0 chr1 119427557 . C . PASS END=119427557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:33,0 chr1 119427558 . T . PASS END=119427655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,90,255:40,0 chr1 119427656 . T . PASS END=119427659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:26,0 chr1 119427660 . G . PASS END=119427668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 119427669 . T . PASS END=119427676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 119427677 . A . PASS END=119427684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1131:0,80,255:29,0 chr1 119427685 . T . PASS END=119427685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 119427686 . G . PASS END=119427703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1111:0,83,255:30,0 chr1 119427704 . G . PASS END=119427718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 119427719 . T . PASS END=119427720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 119427721 . C . PASS END=119427745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,878:0,64,255:26,0 chr1 119427746 . G . PASS END=119427791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1149:0,80,255:31,0 chr1 119427792 . C . PASS END=119427792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 119427793 . A . PASS END=119427807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr1 119427808 . A . PASS END=119427808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 119427809 . G . PASS END=119427832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 119427833 . G . PASS END=119427878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 119427879 . T . PASS END=119427881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 119427882 . T . PASS END=119427883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 119427884 . C . PASS END=119427886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 119427887 . C . PASS END=119427891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 119427892 . A . PASS END=119427898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:21:0,41,810:0,41,255:20,0 chr1 119427899 . T . PASS END=119427904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 119427905 . C . PASS END=119427907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr1 119427908 . C . PASS END=119427912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 119427913 . A . PASS END=119427913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr1 119427914 . C . PASS END=119427915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 119427916 . C . PASS END=119427917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 119427918 . G . PASS END=119427919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 119427920 . C . PASS END=119427920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 119427921 . C . PASS END=119427950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,911:0,65,255:26,0 chr1 119427951 . T . PASS END=119427956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 119427957 . C . PASS END=119427960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 119427961 . T . PASS END=119427992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1034:0,84,255:33,0 chr1 119427993 . G . PASS END=119427993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:30,0 chr1 119427994 . C . PASS END=119428066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1020:0,80,255:34,0 chr1 119428067 . A . PASS END=119428067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:30,0 chr1 119428068 . A . PASS END=119428100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1175:0,86,255:34,0 chr1 119428101 . C . PASS END=119428110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 119428111 . G . PASS END=119428111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:25,0 chr1 119428112 . G . PASS END=119428123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:24,0 chr1 119428124 . G . PASS END=119428127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 119428128 . C . PASS END=119428129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 119428130 . G . PASS END=119428138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 119428139 . C . PASS END=119428139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 119433490 . T . PASS END=119433588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,120,1800:0,161,255:40,0 chr1 119441651 . C . PASS END=119441748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,102,1587:0,102,255:40,0 chr1 119456738 . C . PASS END=119456802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:73:0,120,1800:0,181,255:40,0 chr1 119466059 . C . PASS END=119466212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:29:0,80,1116:0,80,255:40,0 chr1 119466213 . G . PASS END=119466226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:24,0 chr1 119467269 . A . PASS END=119467275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,945:0,66,255:26,0 chr1 119467276 . T . PASS END=119467281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:30,0 chr1 119467282 . T . PASS END=119467282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 119467283 . C . PASS END=119467430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:30:0,87,1147:0,90,255:40,0 chr1 119467431 . A . PASS END=119467432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:42:0,78,1170:0,126,255:26,0 chr1 119467433 . A . PASS END=119467439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,93,255:28,0 chr1 119467440 . T . PASS END=119467440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 119467448 . A . PASS END=119467448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 119469133 . C . PASS END=119469234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:40:0,104,1443:0,104,255:40,0 chr1 119474242 . C . PASS END=119474243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 119474244 . G . PASS END=119474247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:22,0 chr1 119474248 . G . PASS END=119474248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 119474249 . C . PASS END=119474254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr1 119474255 . T . PASS END=119474255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 119474256 . G . PASS END=119474280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,817:0,61,255:26,0 chr1 119474281 . T . PASS END=119474444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1054:0,83,255:40,0 chr1 119474445 . C . PASS END=119474447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 119474448 . C . PASS END=119474455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 119530214 . C . PASS END=119530222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr1 119530223 . G . PASS END=119530247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr1 119530248 . C . PASS END=119530267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 119530268 . C . PASS END=119530268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 119530269 . C . PASS END=119530271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 119530272 . G . PASS END=119530272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 119530273 . G . PASS END=119530390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1147:0,80,255:40,0 chr1 119530391 . C . PASS END=119530391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,996:0,63,255:28,0 chr1 119530392 . G . PASS END=119530402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1065:0,80,255:30,0 chr1 119530403 . T . PASS END=119530403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 119530404 . T . PASS END=119530406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 119530407 . C . PASS END=119530407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 119530408 . C . PASS END=119530409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 119530410 . T . PASS END=119530410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:26,0 chr1 119530411 . T . PASS END=119530412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 119530413 . A . PASS END=119530418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1000:0,68,255:23,0 chr1 119575534 . C . PASS END=119575535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 119575536 . A . PASS END=119575550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr1 119575551 . A . PASS END=119575551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:30,0 chr1 119575552 . T . PASS END=119575718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,96,255:40,0 chr1 119575719 . C . PASS END=119575726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:63:33:0,63,945:0,91,255:24,0 chr1 119575727 . A . PASS END=119575727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:57:32:0,57,855:0,96,255:19,0 chr1 119575728 . T . PASS END=119575750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 119575751 . T . PASS END=119576011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1000:0,81,255:40,0 chr1 119576718 . T . PASS END=119576826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1215:0,84,255:40,0 chr1 119576827 . G . PASS END=119576836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:31:0,72,1080:0,93,255:26,0 chr1 119584887 . T . PASS END=119584911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,114,1723:0,114,255:40,0 chr1 119584912 . G . PASS END=119584948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,146,255:40,0 chr1 119584949 . G A, 49.23 PASS DP=53;MQ=249.87;MQRankSum=5.691;ReadPosRankSum=3.869;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,24,0:0.453,0.000:53:18,9,0:11,15,0:48:84,0,50,850,1037,1888:255,0,255:26,0:4.9227e+01,7.3517e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,18,6:17,12,9,15 chr1 119584950 . T . PASS END=119584972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,117,1755:0,124,255:40,0 chr1 119588205 . C . PASS END=119588285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:48:0,120,1800:0,133,255:40,0 chr1 119591855 . T . PASS END=119591855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 119618973 . C . PASS END=119618973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 119618974 . T . PASS END=119619005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,980:0,84,255:36,0 chr1 119619006 . G . PASS END=119619006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 119619007 . T . PASS END=119619216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:95:37:0,95,1327:0,95,255:40,0 chr1 119619217 . T . PASS END=119619218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:31,0 chr1 119619219 . C . PASS END=119619219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:29,0 chr1 119619220 . T . PASS END=119619220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:28,0 chr1 119619221 . T . PASS END=119619230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1117:0,82,255:31,0 chr1 119624963 . C . PASS END=119624998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:91:0,120,1800:0,255,255:40,0 chr1 119667222 . C . PASS END=119667242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:87:0,120,1800:0,214,255:40,0 chr1 119683178 . C . PASS END=119683178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 119683179 . T . PASS END=119683179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 119683180 . G . PASS END=119683203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr1 119683204 . C . PASS END=119683204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 119683205 . C . PASS END=119683212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 119683213 . G . PASS END=119683213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 119683214 . T . PASS END=119683217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 119683218 . C . PASS END=119683219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 119683220 . G . PASS END=119683241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 119683242 . G . PASS END=119683252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 119683253 . T . PASS END=119683253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 119683254 . G . PASS END=119683267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 119923316 . A . PASS END=119923346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:89:0,120,1800:0,255,255:40,0 chr1 119923701 . G . PASS END=119923723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1336:0,100,255:40,0 chr1 119923724 . T C, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.615;ReadPosRankSum=2.440;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,25,0:0.568,0.000:44:11,14,0:8,11,0:48:85,0,48,886,668,1554:255,0,255:18,0:5.0000e+01,7.5070e-05,5.1380e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,14,11:6,13,13,12 chr1 119923725 . T . PASS END=119923761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,116,1612:0,116,255:40,0 chr1 119923762 . T . PASS END=119923839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,111,1620:0,116,255:40,0 chr1 119925538 . A . PASS END=119925689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,99,1485:0,119,255:40,0 chr1 119927399 . C . PASS END=119927403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 119927404 . C . PASS END=119927642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,1023:0,81,255:40,0 chr1 119927643 . C . PASS END=119927676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1357:0,98,255:38,0 chr1 119927768 . G . PASS END=119927809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:35:0,93,1395:0,101,255:40,0 chr1 119929245 . G . PASS END=119929454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:32:0,87,1205:0,89,255:40,0 chr1 119934733 . A . PASS END=119934734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1185:0,105,255:36,0 chr1 119934735 . T . PASS END=119934735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1218:0,75,255:34,0 chr1 119934736 . G . PASS END=119934872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:36:0,81,1215:0,84,255:40,0 chr1 119934873 . A . PASS END=119934887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr1 119934888 . C . PASS END=119934891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:24:0,54,810:0,72,255:18,0 chr1 119935241 . G . PASS END=119935310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,102,1574:0,102,255:40,0 chr1 119936408 . G . PASS END=119936660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:84:38:0,84,1287:0,84,255:40,0 chr1 119936661 . T . PASS END=119936661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1273:0,75,255:31,0 chr1 119936662 . C . PASS END=119936672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,92,255:32,0 chr1 119936673 . T . PASS END=119936673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:28,0 chr1 119936674 . G . PASS END=119936675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 119936676 . C . PASS END=119936681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1035:0,99,255:25,0 chr1 119936682 . T . PASS END=119936682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1108:0,52,255:23,0 chr1 119936683 . A . PASS END=119936689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1125:0,69,255:25,0 chr1 119936690 . T . PASS END=119936690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,779:0,47,255:24,0 chr1 119936691 . C . PASS END=119936691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 119936692 . T . PASS END=119936692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,825:0,47,255:24,0 chr1 119936693 . C . PASS END=119936701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,923:0,64,255:26,0 chr1 119957770 . G . PASS END=119957770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 119957809 . T . PASS END=119957809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 119958043 . A . PASS END=119958045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 119958046 . G . PASS END=119958063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 119958064 . A . PASS END=119958067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 119958068 . G . PASS END=119958070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 119958071 . C . PASS END=119958071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 119958072 . A . PASS END=119958072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 119958073 . G . PASS END=119958073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 119958074 . G . PASS END=119958083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,637:0,51,255:19,0 chr1 119958084 . G . PASS END=119958098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 119958099 . C . PASS END=119958099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 119958100 . C . PASS END=119958103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 119958104 . T . PASS END=119958104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 119958105 . G . PASS END=119958117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,772:0,69,255:23,0 chr1 119958118 . A . PASS END=119958118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr1 119958119 . A . PASS END=119958121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 119958122 . A . PASS END=119958122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 119958123 . A . PASS END=119958133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,809:0,69,255:23,0 chr1 119958134 . T . PASS END=119958134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 119958135 . C . PASS END=119958136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 119958137 . G . PASS END=119958138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 119958139 . G . PASS END=119958141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 119958142 . T . PASS END=119958164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 119958165 . A . PASS END=119958165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 119958166 . T . PASS END=119958175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:14,0 chr1 119958176 . A . PASS END=119958176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 119958177 . A . PASS END=119958184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 119962041 . A . PASS END=119962205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,99,1485:0,116,255:40,0 chr1 119964418 . C . PASS END=119964418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 119964423 . C . PASS END=119964424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1186:0,93,255:32,0 chr1 119964432 . G . PASS END=119965243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:86:38:0,86,1429:0,86,255:40,0 chr1 119965289 . C . PASS END=119965289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 119965364 . C . PASS END=119965364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 119965420 . C . PASS END=119965420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 119965640 . T . PASS END=119965640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 119965654 . T . PASS END=119965654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr1 120050094 . A . PASS END=120050244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:43:0,114,1710:0,122,255:40,0 chr1 120054126 . A . PASS END=120054290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:46:0,99,1485:0,122,255:40,0 chr1 120056457 . G . PASS END=120057120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:41:0,107,1502:0,107,255:40,0 chr1 120057121 . C . PASS END=120057157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:69:0,120,1800:0,160,255:40,0 chr1 120057158 . C T, 49.93 PASS DP=73;MQ=179.80;MQRankSum=2.258;ReadPosRankSum=3.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,35,0:0.479,0.000:73:18,17,0:20,18,0:48:85,0,50,1198,1199,2397:255,0,255:38,0:4.9927e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,22,16,19:22,16,20,15 chr1 120057159 . T . PASS END=120057197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:74:0,120,1800:0,165,255:40,0 chr1 120057198 . A . PASS END=120057206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,198,255:40,0 chr1 120057207 . T . PASS END=120057245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,136,255:40,0 chr1 120057246 . C A, 47.70 PASS DP=51;MQ=107.69;MQRankSum=0.028;ReadPosRankSum=4.237;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,27,0:0.529,0.000:51:14,11,0:10,16,0:46:82,0,48,966,830,1795:255,0,255:22,0:4.7700e+01,1.0562e-04,5.1361e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,16,8,19:14,10,16,11 chr1 120057247 . C . PASS END=120057268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,111,1537:0,113,255:40,0 chr1 120137445 . A . PASS END=120137445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,208,255:40,0 chr1 120165328 . C . PASS END=120165341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 120165342 . G . LowGQ END=120165342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 120165343 . C . PASS END=120165343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 120165344 . T . PASS END=120165351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 120165352 . C . PASS END=120165352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 120165353 . T . PASS END=120165354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 120165355 . C . PASS END=120165355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 120165356 . G . PASS END=120165384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:19,0 chr1 120165385 . G . PASS END=120165393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 120165394 . C . PASS END=120165441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:18,0 chr1 120165442 . C . PASS END=120165442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 120165443 . A . PASS END=120165464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,603:0,51,255:17,0 chr1 120165465 . T . PASS END=120165465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 120165466 . C . PASS END=120165470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 120165471 . C . PASS END=120165484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,504:0,39,255:13,0 chr1 120165485 . G . PASS END=120165495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 120165496 . C . PASS END=120165509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 120165510 . T . PASS END=120165519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 120165520 . C . PASS END=120165522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 120165523 . C . PASS END=120165530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 120165531 . T . PASS END=120165544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 120165545 . A . PASS END=120165548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 120165549 . G . PASS END=120165550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 120165551 . T . PASS END=120165563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 120165564 . C . PASS END=120165589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,405:0,36,255:13,0 chr1 120165590 . T . PASS END=120165621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 120165622 . A . PASS END=120165649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:5,0 chr1 120165650 . C . PASS END=120165656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,202:3,0 chr1 120165657 . A . PASS END=120165664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:4,0 chr1 120165665 . T . PASS END=120165788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,55:3,0 chr1 120165789 . G . PASS END=120165819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 120165820 . G . PASS END=120165825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,139:0,12,139:4,0 chr1 120165826 . C T, 0.64 DRAGENSnpHardQUAL DP=4;MQ=250.00;MQRankSum=0.727;ReadPosRankSum=-0.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:3,1,0:0.250,0.000:4:2,0,0:1,1,0:9:27,0,50,36,107,143:27,0,104:3,0:6.3779e-01,8.6472e+00,6.1647e+01,4.4437e+01,1.5075e+02,1.5477e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,0,1:0,3,1,0 chr1 120165827 . G . PASS END=120165836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,139:0,12,139:4,0 chr1 120165837 . C . PASS END=120165863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr1 120165864 . G . PASS END=120165914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,55:3,0 chr1 120165915 . G . PASS END=120165951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr1 120165952 . C T, 1.04 DRAGENSnpHardQUAL DP=3;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=-0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:2,1,0:0.333,0.000:3:1,0,0:1,1,0:7:29,0,47,35,72,107:30,0,69:2,0:1.0418e+00,6.7118e+00,5.6702e+01,4.1831e+01,1.1298e+02,1.1633e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,0,0,1:1,1,1,0 chr1 120165953 . G . PASS END=120165963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 120165964 . G . PASS END=120165989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,131:0,12,131:6,0 chr1 120165990 . A . PASS END=120166024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,149:6,0 chr1 120166025 . T . PASS END=120166032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:4:0,9,135:0,12,133:3,0 chr1 120166033 . G . PASS END=120166053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:6,0 chr1 120166054 . C . PASS END=120166054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 120166055 . A . PASS END=120166137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 120166138 . C . LowGQ END=120166139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,100:0,0,137:5,0 chr1 120166140 . G . PASS END=120166141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 120166142 . T . PASS END=120166142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 120166143 . A . PASS END=120166157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 120166158 . A . PASS END=120166161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 120166162 . C . PASS END=120166162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 120166163 . T . PASS END=120166163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 120166164 . T . PASS END=120166164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 120166165 . G . PASS END=120166178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:6,0 chr1 120166179 . A . PASS END=120166179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr1 120166180 . G . PASS END=120166180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr1 120166181 . C . PASS END=120166181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 120166182 . G . PASS END=120166182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,166:5,0 chr1 120166183 . G . LowGQ END=120166185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,122:0,0,137:4,0 chr1 120166186 . G . PASS END=120166188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 120166189 . C . LowGQ END=120166189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,3:6:0:6:0,0,67:32,0,99:2,0 chr1 120166190 . T . PASS END=120166192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 120166193 . T . LowGQ END=120166193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 120166194 . C . PASS END=120166195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 120166196 . C . LowGQ END=120166196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 120166197 . G . PASS END=120166197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 120166198 . C . LowGQ END=120166198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 120166199 . G . PASS END=120166203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 120166204 . C . LowGQ END=120166206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,2:5:0:5:0,0,75:2,0,93:4,0 chr1 120166207 . G . PASS END=120166210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,125:0,15,125:5,0 chr1 120166211 . A . LowGQ END=120166213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:5:0,0,39:0,0,57:6,0 chr1 120166214 . G . PASS END=120166221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 120166222 . G . LowGQ END=120166222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,204:6,0 chr1 120166223 . G . PASS END=120166227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 120166228 . G . LowGQ END=120166228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,108:12,0,121:5,0 chr1 120166229 . A . PASS END=120166230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 120166231 . G . LowGQ END=120166231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,192:9,0,201:6,0 chr1 120166232 . C . PASS END=120166237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 120166238 . G . LowGQ END=120166238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 120166239 . C . PASS END=120166240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 120166241 . A . LowGQ END=120166241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,202:15,0,217:7,0 chr1 120166242 . C . PASS END=120166243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 120166244 . C . PASS END=120166244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 120166245 . C . PASS END=120166252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 120166253 . A . PASS END=120166253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 120166254 . T . LowGQ END=120166254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,194:20,0,214:7,0 chr1 120166255 . C . PASS END=120166256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 120166257 . T . PASS END=120166257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:7,0 chr1 120166258 . G . LowGQ END=120166258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,186:6,0,192:6,0 chr1 120166259 . C . PASS END=120166259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,247:0,10,247:7,0 chr1 120166260 . C . PASS END=120166261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 120166262 . A . PASS END=120166262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:7,0 chr1 120166263 . C . PASS END=120166264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 120166265 . A . PASS END=120166265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:8,0 chr1 120166266 . T . LowGQ END=120166266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,210:3,0,214:7,0 chr1 120166267 . C . PASS END=120166267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,260:0,27,255:9,0 chr1 120166268 . G . LowGQ END=120166268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:7,0 chr1 120166269 . C . PASS END=120166269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 120166270 . G . LowGQ END=120166270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,180:20,0,200:7,0 chr1 120166271 . T . PASS END=120166272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 120166273 . G . PASS END=120166273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 120166274 . C . PASS END=120166274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 120166275 . A . LowGQ END=120166275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:4,0,245:7,0 chr1 120166276 . C . PASS END=120166276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 120166277 . T . LowGQ END=120166277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:6,0 chr1 120166278 . C . PASS END=120166278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 120166279 . G . LowGQ END=120166279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,233:3,0,236:7,0 chr1 120166280 . C . PASS END=120166282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 120166283 . G . LowGQ END=120166283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,210:25,0,236:7,0 chr1 120166284 . C . PASS END=120166285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 120166286 . A . PASS END=120166286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:7,0 chr1 120166287 . G . LowGQ END=120166288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:8:0,0,211:0,0,223:7,0 chr1 120166289 . C . PASS END=120166290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 120166291 . G . LowGQ END=120166292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,202:0,0,202:7,0 chr1 120166293 . A . PASS END=120166293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 120166294 . G . PASS END=120166294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:7,0 chr1 120166295 . G . PASS END=120166297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 120166298 . T . PASS END=120166298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 120166299 . C . PASS END=120166301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 120166302 . G . PASS END=120166302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 120166303 . G . PASS END=120166304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 120166305 . T . PASS END=120166306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:10:9:0,10,255:0,10,255:9,0 chr1 120166307 . G . PASS END=120166307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 120166308 . C . PASS END=120166308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 120166309 . G . PASS END=120166314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 120166315 . A . PASS END=120166315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 120166316 . G . LowGQ END=120166316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 120166317 . C . PASS END=120166317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 120166318 . G . PASS END=120166318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 120166319 . G . PASS END=120166321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 120166322 . T . PASS END=120166323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,324:0,14,255:9,0 chr1 120166324 . A . PASS END=120166328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 120166329 . G . PASS END=120166329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 120166330 . G . PASS END=120166330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 120166331 . C . PASS END=120166338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 120166339 . G . PASS END=120166339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 120166340 . C . PASS END=120166374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 120166375 . G . PASS END=120166382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:15,0 chr1 120166383 . C . PASS END=120166383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 120166384 . G . PASS END=120166385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 120166386 . A . PASS END=120166386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 120166387 . G . PASS END=120166401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:17,0 chr1 120166402 . G . PASS END=120166402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 120166403 . G . PASS END=120166415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 120166416 . T . PASS END=120166440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,629:0,48,255:18,0 chr1 120166441 . C . PASS END=120166446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 120166447 . G . PASS END=120166451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 120166452 . C . PASS END=120166452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 120166453 . G C, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=0.788;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,8,0:0.500,0.000:16:2,4,0:6,4,0:48:85,0,50,286,286,572:255,0,255:6,0:5.0000e+01,6.5233e-05,5.3000e+01,2.8612e+02,3.2085e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,3,5:6,2,5,3 chr1 120166454 . G . PASS END=120166462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 120166463 . T . PASS END=120166464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 120166465 . G . PASS END=120166468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 120166469 . A . PASS END=120166469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 120166470 . G . PASS END=120166490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,588:0,48,255:18,0 chr1 120166491 . C . PASS END=120166491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 120166492 . G . PASS END=120166492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 120166493 . G . PASS END=120166534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:18,0 chr1 120166535 . C . PASS END=120166544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 120166545 . G . PASS END=120166591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,629:0,41,255:19,0 chr1 120166592 . C . PASS END=120166594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 120166595 . G . PASS END=120166597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 120166598 . C . PASS END=120166599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 120166600 . C . PASS END=120166608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 120166609 . G . PASS END=120166609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:18,0 chr1 120166610 . T . PASS END=120166611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 120166612 . C . PASS END=120166612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 120166613 . T . PASS END=120166613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 120166614 . C . PASS END=120166619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 120166620 . G . PASS END=120166620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 120166621 . G . PASS END=120166649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:26,0 chr1 120166650 . G . PASS END=120166689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1041:0,87,255:33,0 chr1 120166690 . A . PASS END=120166690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 120166691 . T . PASS END=120166692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 120166693 . C . PASS END=120166693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 120166694 . T . PASS END=120166697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120166698 . C . PASS END=120166698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 120166699 . C . PASS END=120166700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120166701 . C . PASS END=120166714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:26,0 chr1 120166715 . C . PASS END=120166715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,734:0,44,255:18,0 chr1 120166716 . C . PASS END=120166722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,856:0,61,255:21,0 chr1 120166723 . C . PASS END=120166723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 120166724 . T . PASS END=120166727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 120166728 . T . PASS END=120166739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:19:0,46,684:0,46,255:19,0 chr1 120168498 . C . PASS END=120168507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 120168508 . G . PASS END=120168510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 120168511 . G . PASS END=120168511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:22,0 chr1 120168512 . G . PASS END=120168520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,71,255:26,0 chr1 120168521 . T . PASS END=120168528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1133:0,90,255:32,0 chr1 120168529 . C . PASS END=120168530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1149:0,60,255:33,0 chr1 120168531 . T . PASS END=120168760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:32:0,81,1215:0,92,255:40,0 chr1 120190314 . C . PASS END=120190317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr1 120190318 . T . PASS END=120190318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 120190319 . C . PASS END=120190341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:26,0 chr1 120190342 . G . PASS END=120190346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 120190347 . T . PASS END=120190347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 120190348 . G . PASS END=120190391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:33,0 chr1 120190392 . A . PASS END=120190422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,909:0,75,255:26,0 chr1 120190423 . C . PASS END=120190451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 120190452 . G . PASS END=120190454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 120190455 . C . PASS END=120190458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 120190459 . G . PASS END=120190464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 120190465 . T . PASS END=120190465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 120254424 . G . PASS END=120254424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 120254439 . G . PASS END=120254439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 120254463 . G . PASS END=120254463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 120254567 . T . PASS END=120254567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr1 120254635 . C . PASS END=120254635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 120254646 . A . PASS END=120254763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1028:0,81,255:40,0 chr1 120254764 . A . PASS END=120254764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 120254765 . G . PASS END=120254767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1155:0,90,255:30,0 chr1 120254768 . G . PASS END=120254768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 120254769 . A . PASS END=120254774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 120254775 . G . PASS END=120254777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 120254778 . C . PASS END=120254784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 120255422 . A . PASS END=120255448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:28:0,82,1033:0,82,255:33,0 chr1 120255449 . C . PASS END=120255471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,861:0,60,255:25,0 chr1 120255472 . C . PASS END=120255481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:18,0 chr1 120262516 . A . PASS END=120262542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:39:0,88,1528:0,88,255:39,0 chr1 120263793 . G . PASS END=120263796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 120263797 . G . PASS END=120263811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:36,0 chr1 120263812 . T . PASS END=120263812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1173:0,64,255:34,0 chr1 120263813 . T . PASS END=120263942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1166:0,85,255:40,0 chr1 120263943 . A . PASS END=120263948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:31:0,66,990:0,93,255:26,0 chr1 120265999 . C . PASS END=120266064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,103,1642:0,103,255:40,1 chr1 120266942 . G . PASS END=120266964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1227:0,89,255:36,0 chr1 120266965 . A . PASS END=120266965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1085:0,58,255:32,0 chr1 120266966 . A . PASS END=120267059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1135:0,82,255:39,0 chr1 120267060 . T . PASS END=120267060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1100:0,63,255:27,0 chr1 120267061 . C . PASS END=120267065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 120267066 . C . PASS END=120267080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:25:0,60,900:0,64,255:25,0 chr1 120267081 . T . PASS END=120267083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 120267408 . G . PASS END=120267467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:39:0,114,1637:0,117,255:40,0 chr1 120267468 . C . PASS END=120267498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,118,1800:0,118,255:40,0 chr1 120269474 . G . PASS END=120269528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:29:0,84,1064:0,86,255:37,0 chr1 120269533 . G . PASS END=120269533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 120269612 . C . PASS END=120269612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 120269626 . G . PASS END=120269725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:39:0,90,1529:0,90,255:40,0 chr1 120277244 . T . PASS END=120277244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 120277257 . A . PASS END=120277258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:30,0 chr1 120277259 . T . PASS END=120277259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:29,0 chr1 120277260 . A . PASS END=120277362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1178:0,86,255:40,0 chr1 120277363 . A . PASS END=120277383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:25:0,63,945:0,63,255:26,0 chr1 120277384 . C . PASS END=120277389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 120277906 . G . PASS END=120277906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 120277918 . G . PASS END=120277935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr1 120277936 . C . PASS END=120277975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,731:0,63,255:24,0 chr1 120277976 . T . PASS END=120277976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 120277977 . G . PASS END=120277984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 120277985 . A . PASS END=120277985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 120277986 . G . PASS END=120278008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 120278009 . G . PASS END=120278009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 120278010 . C . PASS END=120278020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 120278021 . G . PASS END=120278061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,527:0,41,255:19,0 chr1 120278062 . C . PASS END=120278066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 120279737 . G . PASS END=120279740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 120279741 . C . PASS END=120279741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 120279742 . G . PASS END=120279742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 120279743 . C . PASS END=120279744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 120279745 . A . PASS END=120279746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 120279747 . G . PASS END=120279749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 120279750 . A . LowGQ END=120279750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,565:1,0,255:16,0 chr1 120279751 . C . PASS END=120279757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 120279758 . T . PASS END=120279774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 120279775 . T . PASS END=120279775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 120279776 . G . PASS END=120279850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,770:0,63,255:26,0 chr1 120279851 . T . PASS END=120279871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,49,255:19,0 chr1 120279872 . A . PASS END=120279873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 120279874 . A . PASS END=120279878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 120279879 . T . PASS END=120279879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 120279880 . C . PASS END=120279889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:16,0 chr1 120283009 . G . PASS END=120283012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:30,0 chr1 120283013 . A . PASS END=120283013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 120283014 . T . PASS END=120283023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:30:0,86,1133:0,86,255:34,0 chr1 120283024 . C . PASS END=120283024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:33,0 chr1 120283025 . T . PASS END=120283031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1246:0,102,255:35,0 chr1 120283032 . T . PASS END=120283032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1218:0,39,255:33,0 chr1 120283033 . G . PASS END=120283127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1202:0,83,255:40,0 chr1 120283128 . G . PASS END=120283138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1053:0,60,255:26,0 chr1 120283139 . A . PASS END=120283142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 120283151 . G . PASS END=120283151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 120284390 . G . PASS END=120284394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 120284395 . T . PASS END=120284399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 120284400 . G . PASS END=120284404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr1 120284405 . A . PASS END=120284483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1123:0,90,255:39,0 chr1 120284484 . G . PASS END=120284486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:26,0 chr1 120284487 . C . PASS END=120284488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120284489 . C . PASS END=120284489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 120284490 . T . PASS END=120284492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120284493 . G . PASS END=120284493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 120284494 . C . PASS END=120284506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:28,0 chr1 120284507 . A . PASS END=120284507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 120284508 . G . PASS END=120284509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:28,0 chr1 120284510 . C . PASS END=120284510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 120284511 . T . PASS END=120284511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120284512 . G . PASS END=120284512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 120284513 . G . PASS END=120284514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120284515 . C . PASS END=120284520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 120285430 . G . PASS END=120285438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr1 120285439 . T . PASS END=120285445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 120285446 . G . PASS END=120285447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 120285448 . C . PASS END=120285508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:23,0 chr1 120285509 . C . PASS END=120285512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 120285513 . T . PASS END=120285516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 120285517 . C . PASS END=120285526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 120285527 . G . PASS END=120285527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 120285528 . C . PASS END=120285536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,813:0,66,255:22,0 chr1 120285537 . A . PASS END=120285537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 120285538 . G . PASS END=120285545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 120285546 . G A, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,11,0:0,17,0:81:169,84,0,1065,84,1065:255,84,0:0,0:1.3127e+02,8.1265e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,14:0,0,17,11 chr1 120285547 . C . PASS END=120285556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,947:0,64,255:25,0 chr1 120285557 . A . PASS END=120285578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,47,255:19,0 chr1 120285579 . C . PASS END=120285583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 120285584 . C . PASS END=120285592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 120285593 . C . PASS END=120285593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 120285594 . T . PASS END=120285625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:21,0 chr1 120285626 . G . PASS END=120285626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 120285627 . G . PASS END=120285630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 120285631 . C . PASS END=120285667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 120286490 . G . PASS END=120286663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,104,1467:0,104,255:40,0 chr1 120286671 . G . PASS END=120286671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1710:0,144,255:38,0 chr1 120286691 . G . PASS END=120286691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 120286721 . G . PASS END=120286721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr1 120286803 . A . PASS END=120286803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 120286828 . C . PASS END=120286828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 120290608 . C . PASS END=120290608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 120290705 . C . PASS END=120290705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 120291315 . G . PASS END=120291315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 120291331 . G . PASS END=120291331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 120291471 . T . PASS END=120291471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 120292290 . T . PASS END=120292290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 120293425 . T . PASS END=120293530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1111:0,82,255:40,0 chr1 120293531 . A . PASS END=120293531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 120295159 . A . PASS END=120295159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 120295172 . C . PASS END=120295172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1490:0,120,255:40,0 chr1 120295173 . C T, 50.00 PASS DP=40;MQ=249.90;MQRankSum=4.870;ReadPosRankSum=2.326;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:7,10,0:10,13,0:48:85,0,48,720,600,1320:255,0,255:17,0:5.0000e+01,7.5070e-05,5.1385e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,17,6:9,8,10,13 chr1 120295174 . T . PASS END=120295210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:40:0,98,1415:0,98,255:40,0 chr1 120295211 . T . PASS END=120295297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:40:0,96,1440:0,120,255:40,0 chr1 120295903 . C . PASS END=120295990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,120,1800:0,147,255:40,0 chr1 120295991 . C . PASS END=120296009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,172,255:40,0 chr1 120298049 . C . PASS END=120298211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:36:0,90,1350:0,90,255:40,0 chr1 120298212 . T . PASS END=120298212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:29,0 chr1 120298213 . T . PASS END=120298218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:32,0 chr1 120298219 . C . PASS END=120298221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,102,255:25,0 chr1 120299896 . C . PASS END=120299903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 120299904 . C . PASS END=120299916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:31,0 chr1 120299917 . T . PASS END=120299917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 120299918 . A . PASS END=120299929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1013:0,85,255:34,0 chr1 120299930 . G . PASS END=120299930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 120299931 . T . PASS END=120300026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:36:0,97,1441:0,97,255:40,0 chr1 120300027 . T . PASS END=120300027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:37,0 chr1 120300028 . A . PASS END=120300058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1267:0,90,255:38,0 chr1 120300059 . C . PASS END=120300061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 120300075 . C . PASS END=120300075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 120301739 . A . PASS END=120301739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 120301741 . C . PASS END=120301743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 120301744 . G . PASS END=120301744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 120301745 . C . PASS END=120301751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:23,0 chr1 120301752 . T . PASS END=120301752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:22,0 chr1 120301753 . G . PASS END=120301762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 120301763 . T . PASS END=120301763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 120301764 . T . PASS END=120301767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,720:0,69,255:23,0 chr1 120301768 . T . PASS END=120301768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 120301769 . A . PASS END=120301778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:26,0 chr1 120301779 . G . PASS END=120301831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1135:0,83,255:34,0 chr1 120301832 . C . PASS END=120301833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,83,255:25,0 chr1 120301834 . C . PASS END=120301834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 120301835 . T . PASS END=120301835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:28,0 chr1 120301836 . A . PASS END=120301838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 120301839 . G . PASS END=120301839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 120301840 . G . PASS END=120301847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:30:0,82,1127:0,82,255:28,0 chr1 120301848 . G . PASS END=120301848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 120301849 . A . PASS END=120301854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1096:0,90,255:30,0 chr1 120301855 . A . PASS END=120301855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr1 120301856 . A . PASS END=120301868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,977:0,87,255:30,0 chr1 120301869 . A . PASS END=120301876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 120301877 . C . PASS END=120301893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:28,0 chr1 120301894 . T . PASS END=120301905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:24:0,65,884:0,65,255:24,0 chr1 120302485 . A . PASS END=120302485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 120302487 . C . PASS END=120302491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 120302492 . T . PASS END=120302494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 120302495 . A . PASS END=120302495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 120302496 . G . PASS END=120302526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,853:0,63,255:25,0 chr1 120302527 . A . PASS END=120302562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1047:0,84,255:34,0 chr1 120302563 . A . PASS END=120302563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr1 120302564 . C . PASS END=120302591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1150:0,85,255:34,0 chr1 120302592 . A . PASS END=120302593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 120302594 . A . PASS END=120302597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 120302598 . C . PASS END=120302612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:26,0 chr1 120302615 . G . PASS END=120302615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 120306780 . C . PASS END=120306780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 120306794 . C . PASS END=120306942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1143:0,86,255:40,0 chr1 120306943 . C . PASS END=120306949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 120306950 . A . PASS END=120306966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 120306967 . T . PASS END=120306968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 120306969 . C . PASS END=120306986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 120306987 . A . PASS END=120306987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 120306988 . G . PASS END=120306988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 120306989 . T . PASS END=120307080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,884:0,69,255:26,0 chr1 120307081 . G . PASS END=120307082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 120307083 . T . PASS END=120307091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 120307092 . A . PASS END=120307093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120307094 . C . PASS END=120307094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 120307095 . C . PASS END=120307108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1164:0,83,255:30,0 chr1 120307109 . C . PASS END=120307109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 120307110 . C . PASS END=120307116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 120307117 . C . PASS END=120307117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:26,0 chr1 120307118 . A . PASS END=120307189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,86,255:39,0 chr1 120307190 . C . PASS END=120307190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1341:0,62,255:34,0 chr1 120307191 . C . PASS END=120307198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1305:0,81,255:35,0 chr1 120307199 . T . PASS END=120307199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:29,0 chr1 120307200 . T . PASS END=120307200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,92,255:28,0 chr1 120307201 . T . PASS END=120307201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:28,0 chr1 120307202 . G . PASS END=120307203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 120307204 . C . PASS END=120307205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1233:0,66,255:30,0 chr1 120307206 . A . PASS END=120307207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1074:0,57,255:30,0 chr1 120307208 . G . PASS END=120307208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 120307209 . T . PASS END=120307209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:30,0 chr1 120307210 . A . PASS END=120307210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr1 120307211 . T . PASS END=120307213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 120307214 . G . PASS END=120307214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 120307215 . T . PASS END=120307218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:29,0 chr1 120307219 . G . PASS END=120307220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 120307221 . C . PASS END=120307221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 120307222 . C . PASS END=120307222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:27,0 chr1 120307223 . A . PASS END=120307228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,1035:0,60,255:26,0 chr1 120307229 . A . PASS END=120307231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,986:0,48,255:21,0 chr1 120307232 . G . PASS END=120307232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 120307233 . C . PASS END=120307234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,978:0,45,255:22,0 chr1 120307235 . G . PASS END=120307235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 120307236 . A . PASS END=120307236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr1 120307237 . G . PASS END=120307249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 120311364 . C . PASS END=120311451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,92,255:40,0 chr1 120311452 . T . PASS END=120311467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 120337241 . C . PASS END=120337308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,132,255:40,0 chr1 120341120 . T . PASS END=120341225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,99,1504:0,99,255:40,0 chr1 120342348 . C . PASS END=120342485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:31:0,83,1194:0,83,255:40,0 chr1 120345451 . C . PASS END=120345463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:19,0 chr1 120345464 . T . PASS END=120345465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 120345466 . T . PASS END=120345467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,759:0,50,255:22,0 chr1 120345468 . C . PASS END=120345473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 120345474 . G . PASS END=120345474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 120345475 . C . PASS END=120345477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:26,0 chr1 120345478 . A . PASS END=120345478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 120345479 . T . PASS END=120345479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 120345480 . C . PASS END=120345496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:29,0 chr1 120345497 . G . PASS END=120345497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 120345498 . C . PASS END=120345507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:31,0 chr1 120345508 . A . PASS END=120345508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 120345509 . G . PASS END=120345537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1141:0,82,255:32,0 chr1 120345538 . C . PASS END=120345539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 120345540 . C . PASS END=120345540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 120345541 . A . PASS END=120345543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1064:0,76,255:26,0 chr1 120345544 . A . PASS END=120345546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:29,0 chr1 120345547 . C . PASS END=120345548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 120345549 . C . PASS END=120345549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 120345550 . T . PASS END=120345550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 120345551 . T . PASS END=120345554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 120345555 . T . PASS END=120345555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1014:0,35,255:25,0 chr1 120345556 . C . PASS END=120345557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 120345558 . A . PASS END=120345558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr1 120345559 . T . PASS END=120345561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 120345562 . C . PASS END=120345562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr1 120345563 . A . PASS END=120345563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr1 120345564 . C . PASS END=120345565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 120345566 . A . PASS END=120345566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:26,0 chr1 120345567 . G . PASS END=120345567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:27,0 chr1 120345568 . C . PASS END=120345571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 120345572 . A . PASS END=120345572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 120345573 . G . PASS END=120345576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 120345577 . C . PASS END=120345579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,927:0,70,255:27,0 chr1 120345580 . C . PASS END=120345585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 120345586 . A . PASS END=120345586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 120345587 . T . PASS END=120345591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 120345592 . C . PASS END=120345592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 120345593 . C . PASS END=120345593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 120345594 . C . PASS END=120345598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 120345599 . A . PASS END=120345599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 120345600 . G . PASS END=120345604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 120345605 . C . PASS END=120345605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 120345606 . T . PASS END=120345610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 120345611 . C . PASS END=120345611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 120345612 . C . PASS END=120345612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1030:0,35,255:26,0 chr1 120345613 . T . PASS END=120345616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 120345617 . T . PASS END=120345617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 120345618 . C . PASS END=120345651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1115:0,80,255:31,0 chr1 120345652 . T . PASS END=120345664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,77,255:26,0 chr1 120345665 . G . PASS END=120345679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 120345680 . A . PASS END=120345736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 120345737 . T . PASS END=120345743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 120345744 . T . PASS END=120345745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 120345746 . T . PASS END=120345759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:16,0 chr1 120345760 . A . PASS END=120345764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,48,255:13,0 chr1 120345765 . C . PASS END=120345766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 120345767 . C . PASS END=120345769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 120345770 . C . PASS END=120345770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 120345771 . T . PASS END=120345788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:13:0,32,495:0,32,255:13,0 chr1 120351326 . C . PASS END=120351392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,121,255:40,0 chr1 120377388 . T . PASS END=120377527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:54:0,106,1800:0,106,255:40,0 chr1 120378620 . C . PASS END=120378640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,102,1349:0,105,255:40,0 chr1 120378641 . C . PASS END=120378677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,119,1643:0,119,255:40,0 chr1 120378678 . C T, 208.60 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,24,0:0,30,0:159:246,162,0,2028,162,2028:255,162,0:0,0:2.0860e+02,1.5860e+02,0.0000e+00,4.5000e+02,1.9337e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,26:0,0,30,24 chr1 120378679 . T . PASS END=120378715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,114,1800:0,114,255:40,0 chr1 120378716 . A . PASS END=120378786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:36:0,93,1390:0,101,255:40,0 chr1 120378787 . G . PASS END=120378787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr1 120378788 . G . PASS END=120378788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 120378789 . G . PASS END=120378812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:25:0,66,990:0,75,255:26,0 chr1 120378813 . T . PASS END=120378818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:22,0 chr1 120378819 . C . PASS END=120378824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 120378825 . C . PASS END=120378831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 120379907 . A . PASS END=120379970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:36:0,87,1324:0,87,255:40,2 chr1 120379971 . C . PASS END=120379982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,113,1537:0,113,255:40,0 chr1 120381807 . C . PASS END=120381817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:29,0 chr1 120381818 . T . PASS END=120381818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 120381819 . T . PASS END=120381822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 120381823 . A . PASS END=120381823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 120381824 . G . PASS END=120382015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1080:0,83,255:40,0 chr1 120382016 . T . PASS END=120382018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 120382880 . C . PASS END=120382952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,132,255:40,0 chr1 120384009 . C . PASS END=120384020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,668:0,51,255:18,0 chr1 120384021 . T . PASS END=120384021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 120384022 . G . PASS END=120384035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:19,0 chr1 120384036 . G . PASS END=120384072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:26,0 chr1 120384073 . G . PASS END=120384089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:29,0 chr1 120384090 . T . PASS END=120384090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 120384091 . G . PASS END=120384103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1185:0,80,255:29,0 chr1 120384104 . G . PASS END=120384104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 120384105 . G . PASS END=120384115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr1 120384116 . G . PASS END=120384116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 120384117 . C . PASS END=120384130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1003:0,87,255:31,0 chr1 120384131 . T . PASS END=120384131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 120384132 . T . PASS END=120384146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:30,0 chr1 120384147 . C . PASS END=120384147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr1 120384148 . A . PASS END=120384154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 120384155 . C . PASS END=120384167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr1 120384168 . T . PASS END=120384180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 120384181 . G . PASS END=120384181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr1 120384182 . A . PASS END=120384185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 120384186 . G . PASS END=120384190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,58,255:19,0 chr1 120384191 . C . PASS END=120384196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 120384197 . T . PASS END=120384204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 120384205 . A G, 107.19 PASS DP=20;MQ=179.23;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,9,0:0,11,0:57:145,60,0,767,60,767:255,60,0:0,0:1.0719e+02,5.7191e+01,8.2835e-06,4.5000e+02,9.1961e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,14:0,0,15,5 chr1 120384206 . A . PASS END=120384213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:17,0 chr1 120384214 . T . PASS END=120384223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:15:0,33,495:0,45,255:13,0 chr1 120385056 . C . PASS END=120385158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:42:0,96,1440:0,108,255:40,0 chr1 120386924 . T . PASS END=120387028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,529:0,41,255:19,0 chr1 120387029 . A . PASS END=120387029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 120387030 . T . PASS END=120387090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,543:0,45,255:18,0 chr1 120387091 . A . PASS END=120387091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 120387092 . C . PASS END=120387103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr1 120387104 . C . PASS END=120387114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 120387115 . G . PASS END=120387128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 120387129 . A . PASS END=120387137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 120387138 . G . PASS END=120387145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr1 120387146 . A . PASS END=120387146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:6,0 chr1 120387147 . A . PASS END=120387149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 120387150 . C . PASS END=120387150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 120387151 . A . PASS END=120387158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,243:8,0 chr1 120436587 . T . PASS END=120437680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:96:42:0,96,1468:0,96,255:40,1 chr1 120437681 . A . PASS END=120437717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,102,1530:0,104,255:40,0 chr1 120437718 . G A, 172.95 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,23,0:0,19,0:123:211,126,0,1591,126,1591:255,126,0:0,0:1.7295e+02,1.2295e+02,0.0000e+00,4.5000e+02,1.5772e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,25:0,0,18,24 chr1 120437719 . T . PASS END=120437741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,107,1456:0,107,255:39,0 chr1 120437742 . A . PASS END=120437742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1294:0,67,255:34,0 chr1 120437743 . A . PASS END=120437755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1358:0,100,255:40,0 chr1 120437756 . A . PASS END=120437846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,99,1543:0,99,255:40,0 chr1 120437847 . G . PASS END=120437883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,123,255:40,0 chr1 120437884 . A G, 50.00 PASS DP=50;MQ=250.00;MQRankSum=6.049;ReadPosRankSum=2.320;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,26,0:0.520,0.000:50:13,15,0:11,11,0:48:85,0,50,901,839,1740:255,0,255:24,0:5.0000e+01,6.5751e-05,5.2893e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,15,15,11:8,16,12,14 chr1 120437885 . G . PASS END=120437921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,120,1800:0,123,255:40,0 chr1 120437922 . C . PASS END=120438857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:38:0,91,1443:0,91,255:40,1 chr1 120438858 . A . PASS END=120438858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1405:0,79,255:36,0 chr1 120438859 . G . PASS END=120438896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1315:0,90,255:39,0 chr1 120438897 . C . PASS END=120438897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr1 120438898 . A . PASS END=120438937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1152:0,81,255:36,0 chr1 120438938 . G . PASS END=120438938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr1 120438939 . G . PASS END=120438939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 120438940 . A . PASS END=120438957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,945:0,60,255:25,0 chr1 120438958 . A . PASS END=120438959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,58,255:18,0 chr1 120457929 . T . PASS END=120457929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 120457930 . C . PASS END=120457930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 120457931 . A . PASS END=120457933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,992:0,65,255:25,0 chr1 120457934 . C . PASS END=120457935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 120457936 . T . PASS END=120457936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 120457937 . A . PASS END=120457966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:35,0 chr1 120457967 . A . PASS END=120457994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,99,1321:0,104,255:38,0 chr1 120457995 . T . PASS END=120457995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 120457996 . C . PASS END=120458003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1341:0,95,255:34,0 chr1 120458004 . A T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.166;ReadPosRankSum=2.850;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,20,0:0.541,0.000:37:7,10,0:10,10,0:48:85,0,50,676,600,1276:255,0,255:17,0:5.0000e+01,6.7563e-05,5.2540e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,9,11:7,10,11,9 chr1 120458005 . C . PASS END=120458041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1208:0,83,255:34,0 chr1 120458042 . C . PASS END=120458062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1052:0,80,255:31,0 chr1 120458063 . A . PASS END=120458063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:27,0 chr1 120458064 . A . PASS END=120458075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 120458076 . G . PASS END=120458086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,87,255:26,0 chr1 120458087 . C . PASS END=120458090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120458091 . G . PASS END=120458091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 120458092 . G . PASS END=120458092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 120458093 . A . PASS END=120458102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 120458103 . G . PASS END=120458103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 120458104 . T . PASS END=120458119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 120458120 . G . PASS END=120458120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:23,0 chr1 120458121 . G . PASS END=120458130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:25:0,71,931:0,71,255:26,0 chr1 120458131 . C . PASS END=120458134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:29,0 chr1 120458135 . G . PASS END=120458135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 120458136 . A . PASS END=120458153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 120458154 . A . PASS END=120458154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 120458155 . G . PASS END=120458155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 120458156 . C . PASS END=120458156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 120458157 . A . PASS END=120458164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:30,0 chr1 120458165 . A . PASS END=120458169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1033:0,73,255:26,0 chr1 120458170 . T . PASS END=120458176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 120458177 . G . PASS END=120458177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 120458178 . C . PASS END=120458246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1186:0,83,255:36,0 chr1 120458247 . A . PASS END=120458301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,786:0,66,255:26,0 chr1 120458302 . A . PASS END=120458302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 120458303 . A . PASS END=120458308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:71:24:0,71,661:0,71,255:25,0 chr1 120458309 . C . PASS END=120458309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 120458310 . C . PASS END=120458324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 120458325 . G . PASS END=120458325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:22,0 chr1 120458326 . T . PASS END=120458330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:24,0 chr1 120458331 . G . PASS END=120458332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 120458333 . T . PASS END=120458367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,953:0,65,255:26,0 chr1 120458368 . G . PASS END=120458370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 120458371 . T . PASS END=120458373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 120458374 . G . PASS END=120458380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120458381 . G . PASS END=120458381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 120458382 . A . PASS END=120458385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 120458386 . C . PASS END=120458386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 120458387 . C . PASS END=120458398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr1 120458399 . C . PASS END=120458399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 120458400 . A . PASS END=120458440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1125:0,82,255:35,0 chr1 120458441 . G . PASS END=120458441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:33,0 chr1 120458442 . C . PASS END=120458575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1210:0,86,255:38,0 chr1 120458576 . T . PASS END=120458576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 120458577 . G . PASS END=120458599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1210:0,86,255:35,0 chr1 120458600 . C . PASS END=120458602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 120458603 . G . PASS END=120458604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 120458605 . A . PASS END=120458617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:29:0,72,1080:0,87,255:26,0 chr1 120458618 . T . PASS END=120458621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120458622 . C . PASS END=120458632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:27:0,68,1022:0,68,255:26,0 chr1 120458633 . C . PASS END=120458650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:30,0 chr1 120458651 . A . PASS END=120458651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr1 120458652 . C . PASS END=120458696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1247:0,89,255:34,0 chr1 120458697 . A . PASS END=120458697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:29,0 chr1 120458698 . G . PASS END=120458715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1324:0,92,255:36,0 chr1 120458716 . A . PASS END=120458716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:35,0 chr1 120458717 . A . PASS END=120458720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1321:0,108,255:36,0 chr1 120458721 . C . PASS END=120458721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:35,0 chr1 120458722 . T . PASS END=120458729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:37:0,83,1351:0,83,255:36,0 chr1 120458730 . A . PASS END=120458730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 120458731 . T . PASS END=120458777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:37:0,82,1201:0,82,255:40,0 chr1 120458778 . A . PASS END=120458778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1404:0,76,255:37,0 chr1 120458779 . G . PASS END=120458886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,105,1458:0,105,255:40,0 chr1 120458887 . G . PASS END=120458923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,147,255:40,0 chr1 120458924 . G A, 42.70 PASS DP=56;MQ=250.00;MQRankSum=6.147;ReadPosRankSum=3.719;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,20,0:0.357,0.000:56:16,8,0:20,12,0:42:77,0,50,686,1277,1964:255,0,255:33,0:4.2702e+01,2.5498e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,18,6,14:16,20,10,10 chr1 120458925 . T . PASS END=120458961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,110,1617:0,110,255:40,0 chr1 120458962 . C . PASS END=120459148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:35:0,93,1180:0,93,255:40,0 chr1 120459149 . T . PASS END=120459157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:36:0,62,1280:0,62,255:36,0 chr1 120459158 . C . PASS END=120459158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1449:0,101,255:35,0 chr1 120459159 . C . PASS END=120459163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1276:0,75,255:36,0 chr1 120459164 . G . PASS END=120459164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 120459165 . G . PASS END=120459167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1311:0,72,255:33,0 chr1 120459168 . C . PASS END=120459168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 120459169 . A . PASS END=120459170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:32,0 chr1 120459171 . A . PASS END=120459171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1257:0,56,255:28,0 chr1 120459172 . A . PASS END=120459179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1413:0,81,255:32,0 chr1 120459180 . G . PASS END=120459182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:62:37:0,62,1312:0,62,255:30,0 chr1 120459183 . C . PASS END=120459199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,83,255:29,0 chr1 120459200 . C . PASS END=120459200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 120459201 . A . PASS END=120459201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 120459202 . T . PASS END=120459202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:30,0 chr1 120459203 . C . PASS END=120459229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1105:0,85,255:34,0 chr1 120459230 . T . PASS END=120459230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:30,0 chr1 120459231 . G . PASS END=120459252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1194:0,86,255:32,0 chr1 120459253 . T . PASS END=120459253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1103:0,60,255:29,0 chr1 120459254 . C . PASS END=120459269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1192:0,83,255:30,0 chr1 120459270 . T . PASS END=120459296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr1 120459297 . A . PASS END=120459297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,746:0,30,255:19,0 chr1 120459298 . A . PASS END=120459300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 120459301 . A . PASS END=120459302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 120459303 . C . PASS END=120459317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:19,0 chr1 120459321 . C . PASS END=120459321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 120460278 . C . PASS END=120460278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 120460288 . C . PASS END=120460386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:35:0,92,1340:0,92,255:40,0 chr1 120461029 . C . PASS END=120461170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:34:0,92,1302:0,92,255:40,0 chr1 120461171 . C . PASS END=120461176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,96,255:25,0 chr1 120461186 . G . PASS END=120461186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 120461925 . T . PASS END=120461925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 120461935 . C . PASS END=120461937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 120461938 . G . PASS END=120461946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 120461947 . T . PASS END=120461947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 120461948 . T . PASS END=120461948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 120461949 . G . PASS END=120461962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 120461963 . A . PASS END=120461972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,364:0,30,255:12,0 chr1 120461973 . G . PASS END=120461985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 120461986 . G . PASS END=120461989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 120461990 . A . PASS END=120461992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 120461993 . T . PASS END=120461994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 120461995 . G . PASS END=120461999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 120462000 . G . PASS END=120462000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 120462001 . G . PASS END=120462001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 120462002 . G . PASS END=120462002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 120462003 . C . PASS END=120462013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 120462014 . G . PASS END=120462014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 120462015 . C . PASS END=120462029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:16,0 chr1 120462030 . G . PASS END=120462030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 120462031 . A . PASS END=120462043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,698:0,51,255:18,0 chr1 120462044 . T . PASS END=120462044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 120462045 . C . PASS END=120462069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 120462070 . G . PASS END=120462072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 120462073 . C . PASS END=120462073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 120462074 . A . PASS END=120462096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,760:0,66,255:23,0 chr1 120462097 . T . PASS END=120462097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr1 120462098 . G . PASS END=120462102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 120462103 . G . PASS END=120462103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 120462104 . G . PASS END=120462109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 120462110 . A . PASS END=120462111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 120462112 . G . PASS END=120462112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:18,0 chr1 120462113 . C . PASS END=120462120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,729:0,47,255:19,0 chr1 120462121 . C . PASS END=120462122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 120462123 . G . PASS END=120462123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 120462124 . G . PASS END=120462128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 120462129 . C . PASS END=120462145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:19,0 chr1 120462146 . T . PASS END=120462159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 120462160 . C . PASS END=120462160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,703:0,52,255:21,0 chr1 120462161 . T . PASS END=120462163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 120462164 . G . PASS END=120462180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,672:0,47,255:19,0 chr1 120462181 . A . PASS END=120462186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 120462187 . A . PASS END=120462187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr1 120462188 . T . PASS END=120462189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 120462190 . T . PASS END=120462190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 120462191 . G . PASS END=120462194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 120462195 . T . PASS END=120462195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 120462196 . G . PASS END=120462208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 120462209 . G . PASS END=120462236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 120462243 . G . PASS END=120462243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 120462852 . C . PASS END=120462854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 120462855 . G . PASS END=120462864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 120462865 . A . PASS END=120462865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 120462866 . T . PASS END=120462870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 120462871 . A . PASS END=120462871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 120462872 . T . PASS END=120462930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1210:0,87,255:40,0 chr1 120462931 . A . PASS END=120462931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:40,0 chr1 120462932 . C . PASS END=120463015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1296:0,95,255:40,0 chr1 120463016 . T . PASS END=120463016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 120463017 . C . PASS END=120463017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 120463018 . A . PASS END=120463020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 120464331 . C . PASS END=120464331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 120464336 . C . PASS END=120464432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:40:0,89,1310:0,89,255:40,0 chr1 120464442 . T . PASS END=120464442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 120464859 . T . PASS END=120464859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:31,0 chr1 120464860 . T . PASS END=120465069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1188:0,84,255:40,0 chr1 120465259 . T . PASS END=120465264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr1 120465265 . C . PASS END=120465265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:31,0 chr1 120465266 . A . PASS END=120465284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:32:0,92,1172:0,92,255:40,0 chr1 120465285 . A . PASS END=120465285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:60:47:0,60,1445:0,60,255:40,0 chr1 120465286 . G . PASS END=120465401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:41:0,106,1537:0,106,255:40,0 chr1 120465404 . G . PASS END=120465404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 120466260 . C . PASS END=120466265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 120466266 . A . PASS END=120466266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 120466267 . C . PASS END=120466304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:31,0 chr1 120466305 . A . PASS END=120466306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr1 120466307 . C . PASS END=120466339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1149:0,93,255:31,0 chr1 120466340 . A . PASS END=120466340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 120466341 . T . PASS END=120466361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:31,0 chr1 120466362 . T . PASS END=120466362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:27,0 chr1 120466363 . C . PASS END=120466408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1107:0,80,255:30,0 chr1 120466409 . A . PASS END=120466409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:30,0 chr1 120466410 . C . PASS END=120466424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1247:0,86,255:31,0 chr1 120466425 . A . PASS END=120466425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:29,0 chr1 120466426 . A . PASS END=120466461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1286:0,89,255:36,0 chr1 120466462 . T . PASS END=120466462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr1 120466463 . C . PASS END=120466503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1263:0,86,255:33,0 chr1 120466504 . G . PASS END=120466504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 120466505 . T . PASS END=120466510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 120466511 . A . PASS END=120466511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 120466512 . G . PASS END=120466546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1131:0,80,255:32,0 chr1 120466547 . A . PASS END=120466569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:26:0,61,886:0,61,255:25,0 chr1 120466570 . G . PASS END=120466570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,792:0,28,255:20,0 chr1 120466571 . G . PASS END=120466571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 120466572 . T . PASS END=120466572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr1 120466573 . T . PASS END=120466589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 120466590 . G . PASS END=120466607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,47,255:19,0 chr1 120466616 . G . PASS END=120466616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 120467928 . T . PASS END=120467935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:15,0 chr1 120467936 . C . PASS END=120467936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 120467937 . T . PASS END=120467952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,592:0,48,255:18,0 chr1 120467953 . A . PASS END=120467953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr1 120467954 . T . PASS END=120467956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 120467957 . A . PASS END=120467957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 120467958 . A . PASS END=120467962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,655:0,63,255:21,0 chr1 120467963 . G . PASS END=120467963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 120467964 . T . PASS END=120467972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 120467973 . C . PASS END=120467981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,745:0,49,255:19,0 chr1 120467982 . G . PASS END=120467985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 120467986 . T . PASS END=120467986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120467987 . G . PASS END=120467996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 120467997 . T . PASS END=120467997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120467998 . C . PASS END=120467999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 120468000 . C . PASS END=120468009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr1 120468010 . T . PASS END=120468010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 120468011 . G . PASS END=120468061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:28:0,83,942:0,83,255:32,0 chr1 120468062 . C . PASS END=120468062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1061:0,49,255:27,0 chr1 120468063 . A . PASS END=120468068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 120468069 . A . PASS END=120468069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 120468070 . G . PASS END=120468072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 120468073 . A . PASS END=120468073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr1 120468074 . A . PASS END=120468097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:33,0 chr1 120468098 . G . PASS END=120468098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr1 120468099 . G . PASS END=120468123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:33,0 chr1 120468124 . A . PASS END=120468142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:27:0,62,1057:0,62,255:26,0 chr1 120468143 . G . PASS END=120468143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 120468144 . T . PASS END=120468150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr1 120468151 . A . PASS END=120468151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:22,0 chr1 120468152 . A . PASS END=120468161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:23,0 chr1 120468162 . A . PASS END=120468163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 120468164 . A . PASS END=120468175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 120468176 . A . PASS END=120468186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,50,255:16,0 chr1 120468187 . G . PASS END=120468187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:15,0 chr1 120468188 . G . PASS END=120468188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:22:0,45,675:0,50,255:15,0 chr1 120468189 . G . PASS END=120468189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 120468190 . G . PASS END=120468196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 120468197 . G . PASS END=120468199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 120468200 . G . PASS END=120468201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 120468202 . G . PASS END=120468202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 120468203 . T . PASS END=120468203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 120468204 . T . PASS END=120468205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 120468206 . A . PASS END=120468206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 120468207 . C . PASS END=120468207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 120468208 . A . PASS END=120468208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 120468209 . G . PASS END=120468243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 120468244 . A . PASS END=120468245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:25:0,50,869:0,50,255:25,0 chr1 120468246 . T . PASS END=120468265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:25,0 chr1 120468266 . A . PASS END=120468266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 120468267 . G . PASS END=120468278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:23,0 chr1 120468279 . C . PASS END=120468279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 120468280 . C . PASS END=120468284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr1 120468285 . T . PASS END=120468285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 120468286 . G . PASS END=120468294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 120468295 . G . PASS END=120468295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 120468296 . G . PASS END=120468298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 120468299 . A . PASS END=120468299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 120468300 . C . PASS END=120468304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 120468305 . A . PASS END=120468311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 120468312 . G . PASS END=120468316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 120468317 . G . PASS END=120468317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr1 120468318 . C . PASS END=120468319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 120468320 . G . PASS END=120468320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 120468321 . T . PASS END=120468321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 120468322 . C . PASS END=120468325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 120468326 . G . PASS END=120468326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 120468327 . G . PASS END=120468330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 120468331 . T . PASS END=120468352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:17:0,41,673:0,41,255:19,0 chr1 120468353 . A . PASS END=120468353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 120468354 . G . PASS END=120468363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:19,0 chr1 120468364 . G . PASS END=120468365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 120468366 . A . PASS END=120468374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 120468375 . T . PASS END=120468381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr1 120468382 . T . PASS END=120468422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,590:0,41,255:19,0 chr1 120468423 . C . PASS END=120468423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 120468424 . C . PASS END=120468433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 120469113 . G . PASS END=120469113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 120469121 . C . PASS END=120469156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1196:0,86,255:39,0 chr1 120469157 . T . PASS END=120469157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 120469158 . A . PASS END=120469205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,100,255:40,0 chr1 120469206 . C . PASS END=120469207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 120469208 . C . PASS END=120469208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 120469209 . A . PASS END=120469223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,833:0,61,255:26,0 chr1 120469224 . A . PASS END=120469234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,690:0,46,255:19,0 chr1 120471599 . C . PASS END=120471599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 120471600 . A . PASS END=120471603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 120471604 . A . PASS END=120471604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 120471605 . A . PASS END=120471620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:21:0,61,693:0,61,255:26,0 chr1 120471621 . A . PASS END=120471633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:30,0 chr1 120471634 . T . PASS END=120471634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 120471635 . T . PASS END=120471639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 120471640 . A . PASS END=120471640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 120471641 . G . PASS END=120471805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1215:0,81,255:40,0 chr1 120471806 . A . PASS END=120471819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:25,0 chr1 120471820 . T . PASS END=120471830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 120471831 . T . PASS END=120471835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 120478042 . T . PASS END=120478220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:87:36:0,87,1305:0,108,255:40,1 chr1 120478221 . G . PASS END=120478221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:29,0 chr1 120478222 . G . PASS END=120478227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:34:0,84,1260:0,92,255:29,0 chr1 120479905 . C . PASS END=120479910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 120479911 . T . PASS END=120479924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:22,0 chr1 120479925 . T . PASS END=120479925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 120479926 . G . PASS END=120479996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,61,255:26,0 chr1 120479997 . T . PASS END=120480045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 120480046 . G . PASS END=120480046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 120480047 . A . PASS END=120480052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 120480053 . A . PASS END=120480061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,35,255:11,0 chr1 120480062 . T . PASS END=120480066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:12:0,27,405:0,36,255:9,0 chr1 120480067 . G . PASS END=120480070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 120480071 . A . PASS END=120480071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 120480072 . A . PASS END=120480089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 120480480 . C . PASS END=120480481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 120480482 . C . PASS END=120480608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:28:0,80,995:0,80,255:40,0 chr1 120480609 . A . PASS END=120480609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:27,0 chr1 120480610 . C . PASS END=120480618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:30,0 chr1 120480619 . G . PASS END=120480619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 120480620 . A . PASS END=120480621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 120480622 . A . PASS END=120480633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,945:0,60,255:23,0 chr1 120483178 . C . PASS END=120483181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 120483182 . C . PASS END=120483193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 120483194 . G . PASS END=120483197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1140:0,93,255:31,0 chr1 120483198 . A . PASS END=120483198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 120483199 . G . PASS END=120483352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:35:0,85,1340:0,85,255:40,0 chr1 120483353 . A . PASS END=120483353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1230:0,72,255:31,0 chr1 120483354 . C . PASS END=120483379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1119:0,90,255:33,0 chr1 120483381 . T . PASS END=120483381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 120484149 . C . PASS END=120484377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:31:0,93,1135:0,93,255:40,0 chr1 120491029 . A . PASS END=120491029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1496:0,117,255:39,0 chr1 120491037 . T . PASS END=120491189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:92:36:0,92,1296:0,92,255:40,0 chr1 120491630 . C . PASS END=120491749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,109,1428:0,109,255:40,0 chr1 120493117 . T . PASS END=120493123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:26,0 chr1 120493124 . C . PASS END=120493140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1025:0,84,255:39,0 chr1 120493141 . C . PASS END=120493141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr1 120493142 . A . PASS END=120493284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:39:0,85,1438:0,85,255:40,0 chr1 120493285 . A . PASS END=120493285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:35,0 chr1 120493286 . G . PASS END=120493449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1310:0,92,255:40,0 chr1 120493450 . G . PASS END=120493460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 120493469 . A . PASS END=120493469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 120496166 . C . PASS END=120496166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 120496167 . T . PASS END=120496167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:36,0 chr1 120496168 . T . PASS END=120496311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:37:0,96,1368:0,101,255:40,0 chr1 120497663 . C . PASS END=120497663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 120497664 . C . PASS END=120497714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1081:0,93,255:39,0 chr1 120497715 . C . PASS END=120497715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:37,0 chr1 120497716 . G . PASS END=120497820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:36:0,84,1350:0,84,255:40,0 chr1 120497821 . G . PASS END=120497821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:29,0 chr1 120497822 . G . PASS END=120497840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 120497841 . T . PASS END=120497855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,908:0,61,255:26,0 chr1 120497859 . T . PASS END=120497859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 120502015 . C . PASS END=120502125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,114,1751:0,114,255:40,0 chr1 120506194 . T . PASS END=120506194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 120506197 . C . PASS END=120506228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,917:0,62,255:26,0 chr1 120506229 . C . PASS END=120506236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:34,0 chr1 120506237 . C . PASS END=120506238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 120506239 . G . PASS END=120506263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1443:0,104,255:39,0 chr1 120506264 . G . PASS END=120506264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:37,0 chr1 120506265 . C . PASS END=120506273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:39:0,86,1398:0,86,255:38,0 chr1 120506274 . C . PASS END=120506274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:38,0 chr1 120506275 . T . PASS END=120506418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:36:0,84,1260:0,93,255:40,0 chr1 120506419 . C . PASS END=120506423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:33:0,78,1170:0,99,255:26,0 chr1 120506424 . G . PASS END=120506425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1215:0,83,255:27,0 chr1 120506426 . G . PASS END=120506426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 120506427 . A . PASS END=120506430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 120508076 . C . PASS END=120508189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:37:0,87,1236:0,87,255:40,0 chr1 120508991 . G . PASS END=120508991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 120508997 . A . PASS END=120508997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr1 120508999 . C . PASS END=120509112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,99,1485:0,123,255:40,0 chr1 120510056 . C . PASS END=120510062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,853:0,69,255:26,0 chr1 120510063 . G . PASS END=120510234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:29:0,86,1033:0,86,255:40,0 chr1 120510235 . T . PASS END=120510237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 120510238 . C . PASS END=120510238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 120510239 . T . PASS END=120510244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:30:0,75,1125:0,88,255:26,0 chr1 120510700 . C . PASS END=120510715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 120510716 . C . PASS END=120510786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1080:0,83,255:34,0 chr1 120510787 . T . PASS END=120510791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 120510792 . T . PASS END=120510796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 120510797 . C . PASS END=120510818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:24,0 chr1 120510819 . T . PASS END=120510819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 120510820 . T . PASS END=120510828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:22,0 chr1 120510829 . A . PASS END=120510855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 120512134 . C . PASS END=120512134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 120512135 . T . PASS END=120512135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 120512136 . G . PASS END=120512141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1196:0,96,255:32,0 chr1 120512142 . C . PASS END=120512339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1225:0,96,255:40,0 chr1 120512340 . T . PASS END=120512340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 120512341 . C . PASS END=120512341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 120512342 . A . PASS END=120512351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:24,0 chr1 120512352 . T . PASS END=120512367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:15:0,42,559:0,45,255:15,0 chr1 120512376 . G . PASS END=120512376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 120518973 . A . PASS END=120518975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 120529583 . C . PASS END=120529705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,102,1357:0,106,255:40,0 chr1 120529714 . T . PASS END=120529714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 120539289 . C . PASS END=120539293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 120539294 . T . PASS END=120539330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:92:0,120,1800:0,255,255:40,0 chr1 120539331 . C T, 43.48 PASS DP=99;MQ=99.96;MQRankSum=-7.487;ReadPosRankSum=7.671;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:57,42,0:0.424,0.000:99:21,25,0:36,17,0:43:78,0,48,1384,2013,3397:255,0,255:40,0:4.3482e+01,2.2910e-04,5.1000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,28,32,10:29,28,19,23 chr1 120539332 . C . PASS END=120539368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:88:0,120,1800:0,235,255:40,0 chr1 120539369 . T . PASS END=120539369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 120539620 . C . PASS END=120539627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,929:0,75,255:26,0 chr1 120539628 . C . PASS END=120539637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 120539638 . C . PASS END=120539639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 120539640 . A . PASS END=120539640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 120539641 . A . PASS END=120539641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 120539642 . A . PASS END=120539686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,995:0,84,255:36,0 chr1 120539687 . T . PASS END=120539687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr1 120539688 . G . PASS END=120539690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,99,1485:0,114,255:36,0 chr1 120539691 . G . PASS END=120539691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:34,0 chr1 120539692 . G . PASS END=120539716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,99,255:36,0 chr1 120539717 . A . PASS END=120539717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1207:0,75,255:27,0 chr1 120539718 . C . PASS END=120539955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:33:0,86,1233:0,86,255:40,0 chr1 120547952 . C . PASS END=120548151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:39:0,104,1465:0,104,255:40,0 chr1 120548152 . C . PASS END=120548152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:35,0 chr1 120548153 . G . PASS END=120548173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,89,255:36,0 chr1 120548174 . G . PASS END=120548188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr1 120548189 . C . PASS END=120548197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,790:0,53,255:19,0 chr1 120548198 . A . PASS END=120548198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr1 120548199 . G . PASS END=120548202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 120548203 . T . PASS END=120548203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr1 120548204 . C . PASS END=120548209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 120548210 . A . PASS END=120548210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 120548211 . T . PASS END=120548211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 120572529 . T . PASS END=120572531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:13,0 chr1 120572532 . C . PASS END=120572532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 120572533 . A . PASS END=120572534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 120572535 . T . PASS END=120572546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:18,0 chr1 120572547 . T C, 7.69 DRAGENSnpHardQUAL DP=18;MQ=24.61;MQRankSum=1.185;ReadPosRankSum=2.606;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,3,0:0.167,0.000:18:6,2,0:9,1,0:8:42,0,35,107,500,607:62,0,255:15,0:7.6925e+00,8.1052e-01,3.8811e+01,1.0811e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,3,3,0:7,8,2,1 chr1 120572548 . T . PASS END=120572548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 120572549 . G . PASS END=120572556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:25,0 chr1 120572557 . T . PASS END=120572557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 120572558 . A . PASS END=120572571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,822:0,61,255:26,0 chr1 120572572 . C T, 0.17 DRAGENSnpHardQUAL DP=26;MQ=26.79;MQRankSum=0.642;ReadPosRankSum=0.963;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:23,3,0:0.115,0.000:26:11,2,0:12,1,0:14:21,0,35,107,823,930:38,0,255:23,0:1.7169e-01,1.4117e+01,5.2117e+01,1.2140e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,3,3,0:12,11,2,1 chr1 120572573 . A . PASS END=120572591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,933:0,78,255:26,0 chr1 120572592 . C . PASS END=120572594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 120572595 . T . PASS END=120572595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 120572596 . C . PASS END=120572601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr1 120572602 . A . PASS END=120572602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 120572603 . C . PASS END=120572606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr1 120572607 . A . PASS END=120572607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 120572608 . A . PASS END=120572608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 120572609 . T . PASS END=120572610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 120594347 . T . PASS END=120594377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,818:0,69,255:25,0 chr1 120594378 . T . PASS END=120594393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:19,0 chr1 120605894 . C . PASS END=120605954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:67:0,120,1800:0,185,255:40,0 chr1 120611948 . C . PASS END=120611963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:106:0,120,1800:0,190,255:40,0 chr1 120611964 . G C, 40.00 PASS DP=119;MQ=57.86;MQRankSum=-1.706;ReadPosRankSum=-0.784;FractionInformativeReads=0.992;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:76,42,0:0.356,0.000:118:38,18,0:38,24,0:39:75,0,43,175,175,175:255,0,255:40,0:3.9997e+01,5.5270e-04,4.5651e+01,1.7477e+02,2.0954e+02,1.7778e+02:0.00,34.77,37.78,34.77,69.54,37.78:46,30,25,17:46,30,17,25 chr1 120611965 . C . PASS END=120612005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,1:123:97:118:0,97,1800:0,97,255:40,8 chr1 120612006 . G A, 45.95 PASS DP=114;MQ=62.19;MQRankSum=-1.400;ReadPosRankSum=-1.779;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,84,0:0.737,0.000:114:12,45,0:18,39,0:30:81,0,27,181,181,181:255,0,255:28,0:4.5955e+01,4.5389e-03,2.9918e+01,1.8072e+02,2.1549e+02,1.8373e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,13,44,40:17,13,43,41 chr1 120612007 . C . PASS END=120612020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:110:0,120,1800:0,255,255:40,0 chr1 120616017 . C . PASS END=120616041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:166,0:166:99:162:0,120,1800:0,255,255:40,0 chr1 120837927 . T . PASS END=120837927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,7:93:31:93:0,31,3045:0,31,255:40,0 chr1 120837928 . G . PASS END=120837956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:84:0,120,1800:0,197,255:40,0 chr1 120845995 . T . PASS END=120846117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:37:0,90,1350:0,98,255:40,0 chr1 120846118 . A . PASS END=120846119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1170:0,61,255:26,0 chr1 120854492 . G . PASS END=120854586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:43:0,111,1665:0,129,255:40,0 chr1 120925153 . G . PASS END=120925153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 120925154 . C . PASS END=120925154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1272:0,70,255:34,0 chr1 120925155 . T . PASS END=120925200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1156:0,80,255:40,0 chr1 120925201 . G . PASS END=120925201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 120925202 . G . PASS END=120925202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 120925203 . G . PASS END=120925204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1039:0,74,255:27,0 chr1 120925205 . C . PASS END=120925205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:25,0 chr1 120925206 . C . PASS END=120925208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 120925500 . G . PASS END=120925592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:80:39:0,80,1352:0,80,255:40,0 chr1 120925593 . A . PASS END=120925593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:45:42:0,45,1165:0,45,255:34,0 chr1 120925594 . G . PASS END=120925610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1205:0,81,255:37,0 chr1 120925611 . G . PASS END=120925611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1194:0,61,255:32,0 chr1 120925612 . C . PASS END=120925621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1129:0,80,255:36,0 chr1 120926004 . G . PASS END=120926006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 120926007 . C . PASS END=120926012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 120926013 . C . PASS END=120926014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 120926015 . G . PASS END=120926020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 120926021 . T . PASS END=120926021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 120926022 . G . PASS END=120926033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 120926034 . A . PASS END=120926036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 120926037 . G . PASS END=120926041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,86,255:30,0 chr1 120926042 . G . PASS END=120926042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr1 120926043 . C . PASS END=120926043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 120926044 . T G, 1.01 DRAGENSnpHardQUAL DP=34;MQ=37.68;MQRankSum=-2.383;ReadPosRankSum=3.501;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:29,5,0:0.147,0.000:34:15,2,0:14,3,0:7:29,0,38,138,138,138:92,0,255:26,0:1.0050e+00,6.8493e+00,4.7474e+01,1.4446e+02,1.7923e+02,1.4747e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,17,2,3:16,13,3,2 chr1 121107154 . A . PASS END=121107216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:37:0,89,1269:0,89,255:40,0 chr1 121115832 . G . PASS END=121115854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,1:120:99:117:0,120,1800:0,255,255:40,0 chr1 121115855 . C . PASS END=121115920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:143,0:143:99:131:0,120,1800:0,255,255:40,0 chr1 121115921 . T . PASS END=121115957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,0:128:99:112:0,120,1800:0,255,255:40,0 chr1 121115958 . T C, 0.05 DRAGENSnpHardQUAL DP=111;MQ=29.37;MQRankSum=-5.848;ReadPosRankSum=-3.362;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:89,22,0:0.198,0.000:111:45,12,0:44,10,0:19:16,0,39,787,3096,3883:255,0,255:40,0:5.1305e-02,1.9302e+01,6.1635e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:36,53,3,19:46,43,9,13 chr1 121115959 . G . PASS END=121115995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:84:0,120,1800:0,203,255:40,0 chr1 121115996 . G . PASS END=121116046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,117,1562:0,117,255:40,0 chr1 121116047 . G . PASS END=121116047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:67:56:0,67,1405:0,67,255:40,0 chr1 121116687 . C . PASS END=121116815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:94:37:0,94,1288:0,94,255:40,0 chr1 121124562 . C . PASS END=121124786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:41:0,96,1459:0,96,255:40,0 chr1 121128367 . G . LowDepth;LowGQ END=121128432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr1 121128433 . T . LowDepth;LowGQ END=121128468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 121129495 . G . PASS END=121129497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 121129498 . A . PASS END=121129498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 121129499 . A . PASS END=121129500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 121129501 . A . PASS END=121129501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr1 121129502 . A . PASS END=121129519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,604:0,45,255:17,0 chr1 121129520 . T . PASS END=121129537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,721:0,54,255:19,0 chr1 121129538 . T . PASS END=121129540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 121129541 . T . PASS END=121129556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,735:0,47,255:18,0 chr1 121129557 . T C, 0.24 DRAGENSnpHardQUAL DP=19;MQ=14.00;MQRankSum=3.633;ReadPosRankSum=0.694;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,9,0:0.474,0.000:19:5,5,0:5,4,0:13:22,0,14,314,329,643:255,0,255:10,0:2.3557e-01,1.2860e+01,2.9860e+01,3.2670e+02,3.7640e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,1,0,9:6,4,4,5 chr1 121129558 . G . PASS END=121129570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,729:0,57,255:19,0 chr1 121129571 . G . PASS END=121129573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 121129574 . T . PASS END=121129575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 121129576 . C . PASS END=121129577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 121129578 . G . PASS END=121129583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 121129584 . C . PASS END=121129584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 121129585 . A . PASS END=121129585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:18,0 chr1 121129586 . A . PASS END=121129589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 121129590 . C . PASS END=121129590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 121129591 . A . PASS END=121129594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 121129595 . A . PASS END=121129634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,762:0,63,255:25,0 chr1 121129635 . G . PASS END=121129639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 121129640 . G . PASS END=121129640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 121129641 . C . PASS END=121129642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 121129643 . T . PASS END=121129644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 121129645 . G . PASS END=121129667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1185:0,80,255:28,0 chr1 121129668 . A . PASS END=121129668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 121129669 . G . PASS END=121129674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 121129675 . G . PASS END=121129675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 121129676 . A . PASS END=121129686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:31,0 chr1 121129687 . T . PASS END=121129687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,981:0,79,255:30,0 chr1 121129688 . T . PASS END=121129689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1156:0,93,255:31,0 chr1 121129690 . A . PASS END=121129690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 121129691 . C . PASS END=121129694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:33,0 chr1 121129695 . A . PASS END=121129695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr1 121129696 . A . PASS END=121129712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:33,0 chr1 121129713 . T . PASS END=121129714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 121129715 . A . PASS END=121129716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1148:0,93,255:31,0 chr1 143767833 . T C, 34.57 PASS DP=85;MQ=88.00;MQRankSum=-7.875;ReadPosRankSum=1.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,37,0:0.435,0.000:85:22,14,0:26,23,0:34:69,0,48,1287,1651,2938:255,0,255:40,0:3.4574e+01,1.5532e-03,5.0602e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,34,9,28:26,22,24,13 chr1 143767834 . G . PASS END=143767848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:77:0,120,1800:0,232,255:40,0 chr1 143873758 . A . PASS END=143873778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,405:0,36,255:12,0 chr1 143873779 . A . PASS END=143873787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 143873788 . C . PASS END=143873806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 143873807 . G . PASS END=143873810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 143873811 . G . LowGQ END=143873811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:5,0 chr1 143873812 . T . PASS END=143873834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:5:0,12,180:0,15,194:6,0 chr1 143873835 . G . PASS END=143873843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 143873844 . C . PASS END=143873859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 143897547 . T . LowDepth;LowGQ END=143897641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 143904523 . T . PASS END=143904538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 143904539 . A . PASS END=143904539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 143904540 . T . PASS END=143904542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 143904543 . A . PASS END=143904543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 143904544 . T . PASS END=143904546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 143904547 . A . PASS END=143904547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 143904548 . G . PASS END=143904550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr1 143904551 . T . PASS END=143904551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 143904552 . T . PASS END=143904553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 143904554 . C . PASS END=143904554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 143904555 . T . PASS END=143904555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 143904556 . T . PASS END=143904556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 143904557 . T . PASS END=143904558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 143904559 . T . PASS END=143904559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 143904560 . A . PASS END=143904572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 143904573 . G . PASS END=143904573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 143904574 . A . PASS END=143904574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,411:0,25,255:12,0 chr1 143904575 . A . PASS END=143904575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 143904576 . A . PASS END=143904576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 143904577 . A . PASS END=143904581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 143904582 . T . PASS END=143904582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 143904583 . T . PASS END=143904586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 143904587 . G . PASS END=143904588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 143904589 . G . PASS END=143904596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 143904597 . C . PASS END=143904611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 143904612 . A . PASS END=143904612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 143904613 . T . PASS END=143904614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr1 143906012 . C . PASS END=143906084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:29:0,87,1009:0,87,255:40,0 chr1 143906085 . A . PASS END=143906121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,167,255:40,0 chr1 143906122 . C A, 0.03 DRAGENSnpHardQUAL DP=59;MQ=19.88;MQRankSum=-4.293;ReadPosRankSum=4.233;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:49,10,0:0.169,0.000:59:26,5,0:23,5,0:22:13,0,31,226,1710,1937:105,0,255:38,0:3.0281e-02,2.1583e+01,5.5916e+01,2.4800e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,31,7,3:29,20,8,2 chr1 143906123 . C . PASS END=143906136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:49:0,111,1748:0,111,255:40,0 chr1 143910078 . C . PASS END=143910085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 143910086 . A . PASS END=143910086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,459:0,34,255:16,0 chr1 143910087 . C . PASS END=143910118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,623:0,51,255:19,0 chr1 143910119 . T . PASS END=143910119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 143910120 . T . PASS END=143910153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:17,0 chr1 143910154 . C . PASS END=143910154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 143910155 . G . PASS END=143910155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 143912144 . T . PASS END=143912295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:96:36:0,96,1440:0,108,255:40,0 chr1 143914114 . T . PASS END=143914265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,107,1496:0,107,255:40,0 chr1 143916242 . A . LowGQ END=143916308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:1:0,0,14:0,0,16:3,0 chr1 143946418 . T . PASS END=143946431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 143946432 . C . PASS END=143946440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 143946441 . T . PASS END=143946449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr1 143946450 . A . PASS END=143946450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 143946451 . T . PASS END=143946454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 143946455 . A . PASS END=143946471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:24,0 chr1 143946472 . T . PASS END=143946472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 143946473 . T . PASS END=143946488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:24,0 chr1 143946489 . G . PASS END=143946489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 143946490 . A . PASS END=143946497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 143946498 . A . PASS END=143946498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 143946499 . C . PASS END=143946503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 144013901 . A . PASS END=144013903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:84:0,120,1800:0,235,255:40,0 chr1 144013904 . T . PASS END=144014013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:148,1:149:99:98:0,120,1800:0,255,255:40,0 chr1 144014014 . A . PASS END=144014050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:175,1:176:99:166:0,120,1800:0,255,255:40,0 chr1 144014051 . G A, 30.62 PASS DP=167;MQ=250.00;MQRankSum=9.899;ReadPosRankSum=-0.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:122,45,0:0.269,0.000:167:63,25,0:59,20,0:31:65,0,50,1544,4280,5824:255,0,255:40,0:3.0622e+01,3.7872e-03,5.3004e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:48,74,20,25:61,61,20,25 chr1 144014052 . C . PASS END=144014067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:161,0:161:99:154:0,120,1800:0,255,255:40,0 chr1 144014068 . T C, 50.00 PASS DP=154;MQ=250.00;MQRankSum=10.030;ReadPosRankSum=3.208;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,104,0:0.675,0.000:154:25,59,0:25,45,0:41:85,0,39,3693,1721,5414:255,0,255:40,0:5.0000e+01,3.2643e-04,4.1859e+01,4.4853e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,35,41,63:22,28,50,54 chr1 144014069 . G . PASS END=144014093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,0:138:99:130:0,120,1800:0,255,255:40,0 chr1 144048680 . T . PASS END=144048763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:39:0,93,1467:0,93,255:40,0 chr1 144048764 . T . PASS END=144048764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1396:0,68,255:34,0 chr1 144048765 . C . PASS END=144048769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:41:0,96,1440:0,107,255:34,0 chr1 144053506 . G . PASS END=144053514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 144053515 . G . PASS END=144053517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 144053518 . T . PASS END=144053518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 144053519 . G . PASS END=144053524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,740:0,60,255:22,0 chr1 144053525 . T . PASS END=144053525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 144053526 . C . PASS END=144053537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:26,0 chr1 144053538 . G . PASS END=144053566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1005:0,82,255:36,0 chr1 144053567 . C . LowGQ END=144053567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:0:37:0,0,1170:5,0,255:33,0 chr1 144053568 . G . PASS END=144053568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr1 144053569 . G . PASS END=144053668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,100,1368:0,100,255:40,0 chr1 144094362 . A . PASS END=144094389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr1 144094390 . A . PASS END=144094390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1052:0,57,255:30,0 chr1 144094391 . T . PASS END=144094401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1202:0,86,255:32,0 chr1 144094402 . A . PASS END=144094403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 144094404 . G . PASS END=144094405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1186:0,86,255:30,0 chr1 144094406 . C . PASS END=144094422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,970:0,67,255:26,0 chr1 144094423 . C . PASS END=144094423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 144094424 . G . PASS END=144094424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 144159763 . A . LowDepth;LowGQ END=144159814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144174692 . G . LowDepth;LowGQ END=144174864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144177875 . G . LowDepth;LowGQ END=144177912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144177913 . T . LowDepth;LowGQ END=144178047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144178762 . A . LowDepth;LowGQ END=144178870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144179474 . G . LowDepth;LowGQ END=144179646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144180356 . G . LowDepth;LowGQ END=144180407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144188352 . A . LowDepth;LowGQ END=144188403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144192206 . G . LowDepth;LowGQ END=144192378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144197868 . A . LowDepth;LowGQ END=144197919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144208061 . G . LowDepth;LowGQ END=144208233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144208948 . A . LowDepth;LowGQ END=144209056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144212133 . A . LowDepth;LowGQ END=144212241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144212845 . G . LowDepth;LowGQ END=144213017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144213727 . G . LowDepth;LowGQ END=144213778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144217612 . G . LowDepth;LowGQ END=144217729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr1 144217730 . A . LowDepth;LowGQ END=144217784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144219236 . G . LowDepth;LowGQ END=144219408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144220128 . A . LowDepth;LowGQ END=144220179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144220787 . G . PASS END=144220793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 144220794 . A . PASS END=144220795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 144220796 . G . PASS END=144220796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr1 144220797 . G . PASS END=144220799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 144220800 . C . PASS END=144220814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 144220815 . G . PASS END=144220846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 144220847 . A . PASS END=144220847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 144220848 . T . PASS END=144220850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 144220851 . T . PASS END=144220851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 144220852 . A . PASS END=144220857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 144220858 . C . PASS END=144220891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:18,0 chr1 144220892 . C . PASS END=144220895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:10,0 chr1 144220896 . C . PASS END=144220900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:21:16:0,21,315:0,31,255:8,0 chr1 144220901 . C . PASS END=144220929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,147:0,12,147:6,0 chr1 144220930 . A . PASS END=144220938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 144220939 . G . PASS END=144220941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:4,0 chr1 144220942 . T . PASS END=144220959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 144276417 . T . LowDepth;LowGQ END=144276501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144277346 . T . LowDepth;LowGQ END=144277410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144280578 . C . LowDepth;LowGQ END=144280629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144281126 . T . LowDepth;LowGQ END=144281190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144284622 . C . LowDepth;LowGQ END=144284857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144287458 . C . LowDepth;LowGQ END=144287560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144289797 . T . LowDepth;LowGQ END=144289974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144339778 . A . LowDepth;LowGQ END=144339871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144339872 . G . LowDepth;LowGQ END=144339956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:0:1:0,0,16:0,0,16:3,0 chr1 144339957 . C . PASS END=144339972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 144339973 . C . PASS END=144339973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 144339974 . T . PASS END=144340029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:8,0 chr1 144340030 . T . PASS END=144340031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 144340032 . G . PASS END=144340032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 144340033 . A . PASS END=144340033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 144340034 . G . PASS END=144340053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 144340054 . G . PASS END=144340062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 144340063 . T . PASS END=144340063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 144340064 . G . PASS END=144340086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:13,0 chr1 144340087 . G . PASS END=144340087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 144340088 . G . PASS END=144340093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 144340094 . G . PASS END=144340099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 144340100 . G . PASS END=144340105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 144340106 . A . PASS END=144340106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 144340107 . A . PASS END=144340133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:13,0 chr1 144340134 . G . PASS END=144340136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 144340137 . G . PASS END=144340158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,332:0,33,255:12,0 chr1 144340159 . G . PASS END=144340159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 144340160 . G . PASS END=144340202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 144340203 . T . PASS END=144340204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 144340205 . A . PASS END=144340206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 144340207 . G . PASS END=144340207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 144340208 . C . PASS END=144340208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 144340209 . G . PASS END=144340209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 144340210 . T . PASS END=144340224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:10,0 chr1 144340225 . G . LowGQ END=144340225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:8,0 chr1 144340226 . G . PASS END=144340226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 144340227 . C . PASS END=144340245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,349:0,27,255:9,0 chr1 144340246 . T . PASS END=144340250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 144340251 . C . PASS END=144340275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 144340276 . C . PASS END=144340279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 144340280 . C . PASS END=144340286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 144340287 . C A, 0.02 DRAGENSnpHardQUAL DP=9;MQ=39.70;MQRankSum=-0.751;ReadPosRankSum=-0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:1,1,0:7,0,0:23:12,0,39,36,286,322:9,0,255:9,0:2.1322e-02,2.3102e+01,6.5435e+01,5.8869e+01,3.4400e+02,3.4800e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,7,0,1:6,2,0,1 chr1 144340288 . G . PASS END=144340288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 144340289 . C . LowGQ END=144340289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:9,0 chr1 144340290 . G . PASS END=144340292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 144340293 . T . PASS END=144340293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 144340294 . T . PASS END=144340295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 144340296 . T . PASS END=144340296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 144340297 . G . PASS END=144340308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 144340309 . G . PASS END=144340309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 144340310 . G . PASS END=144340310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 144340311 . T . LowGQ END=144340311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,202:20,0,222:7,0 chr1 144340312 . A . PASS END=144340312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 144340313 . G . PASS END=144340313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 144340314 . C . PASS END=144340314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 144340315 . T . PASS END=144340320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 144340321 . A . PASS END=144340323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:6,0 chr1 144340324 . C . PASS END=144340324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 144340325 . T . LowGQ END=144340326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,133:0,0,142:4,0 chr1 144340327 . G . PASS END=144340327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 144340328 . G . PASS END=144340328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:4,0 chr1 144340329 . G . PASS END=144340330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:5,0 chr1 144340331 . G . PASS END=144340331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 144340332 . T . PASS END=144340340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,121:5,0 chr1 144340341 . G . LowGQ END=144340341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr1 144340342 . G . PASS END=144340346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:4,0 chr1 144340347 . G . LowGQ END=144340347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 144340348 . G . PASS END=144340364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr1 144340365 . C . LowGQ END=144340584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 144505755 . A . LowDepth;LowGQ END=144505881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144506541 . G . PASS END=144506546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 144506547 . A . PASS END=144506547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 144508284 . T . LowDepth;LowGQ END=144508482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144598538 . A . PASS END=144598546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,726:0,66,255:23,0 chr1 144598547 . A . PASS END=144598547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 144598548 . A . PASS END=144598564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,947:0,75,255:26,0 chr1 144598565 . G . PASS END=144598603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:28:0,84,1031:0,84,255:40,0 chr1 144598604 . G . PASS END=144598640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,156,255:40,0 chr1 144598641 . C T, 27.71 PASS DP=71;MQ=34.40;MQRankSum=-1.324;ReadPosRankSum=4.060;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:49,22,0:0.310,0.000:71:25,11,0:24,11,0:28:62,0,41,778,1662,2441:255,0,255:40,0:2.7710e+01,7.5326e-03,4.4133e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,19,8,14:28,21,15,7:144598641 chr1 144598642 . G . PASS END=144598658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,195,255:40,0 chr1 144598659 . C T, 26.08 PASS DP=77;MQ=34.75;MQRankSum=-0.952;ReadPosRankSum=2.243;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:54,23,0:0.299,0.000:77:26,11,0:28,12,0:26:61,0,41,786,1816,2601:255,0,255:40,0:2.6081e+01,1.0889e-02,4.4136e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,26,10,13:30,24,14,9:144598641 chr1 144598660 . T . PASS END=144598696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,179,255:40,0 chr1 144598697 . A . PASS END=144598717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:69:0,120,1800:0,178,255:40,0 chr1 144598718 . T . PASS END=144598754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,3:71:99:59:0,120,1800:0,161,255:40,0 chr1 144598755 . G A, 2.19 DRAGENSnpHardQUAL DP=52;MQ=35.53;MQRankSum=-0.218;ReadPosRankSum=3.120;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:43,9,0:0.173,0.000:52:21,7,0:22,2,0:4:33,0,41,285,1509,1794:118,0,255:39,0:2.1852e+00,4.0300e+00,4.8155e+01,2.8912e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,22,4,5:19,24,2,7 chr1 144598756 . A . PASS END=144598780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:45:0,102,1574:0,102,255:40,0 chr1 144615131 . A . PASS END=144615135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,892:0,66,255:24,0 chr1 144615136 . G . PASS END=144615145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:30,0 chr1 144615146 . G . PASS END=144615196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:30:0,87,1163:0,90,255:40,0 chr1 144615197 . A . PASS END=144615200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:48:0,81,1215:0,128,255:27,0 chr1 144615201 . T . PASS END=144615216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:60:48:0,60,900:0,144,255:26,0 chr1 144615217 . A . PASS END=144615229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:42:58:0,42,630:0,173,255:19,0 chr1 144615230 . C . PASS END=144615231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:33:65:0,33,495:0,162,255:13,0 chr1 144615232 . G . PASS END=144615234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:21:65:0,21,315:0,179,255:9,0 chr1 144615235 . C . PASS END=144615236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:15:64:0,15,225:0,192,255:5,0 chr1 144615237 . T G, 3.90 DRAGENSnpHardQUAL DP=64;MQ=24.34;MQRankSum=-3.061;ReadPosRankSum=-2.168;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,14,0:0.219,0.000:64:25,9,0:25,5,0:4:36,0,40,472,1730,2202:255,0,255:3,0:3.9014e+00,2.2715e+00,4.5522e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,25,7,7:34,16,6,8 chr1 144615238 . A . LowGQ END=144615245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:62,1:63:0:59:0,0,0:0,139,255:3,1 chr1 144615246 . A AAG, 193.02 PASS DP=56;MQ=24.05;MQRankSum=0.589;ReadPosRankSum=0.118;FractionInformativeReads=0.929;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:3,49,0:0.942,0.000:52:1,26,0:2,23,0:153:226,156,0,326,326,326:255,0,136:0,68:1.9302e+02,1.5277e+02,0.0000e+00,3.2779e+02,3.5779e+02,3.3080e+02:0.00,30.00,33.01,34.77,64.77,37.78:2,1,20,29:2,1,27,22 chr1 144615247 . A . LowGQ END=144615247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:10,46:56:0:56:0,0,0:255,0,123:40,0 chr1 144615248 . G . PASS END=144615248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,169,255:40,0 chr1 144615249 . A . PASS END=144615249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:32:55:0,32,1608:0,32,255:40,3 chr1 144615250 . G . PASS END=144615250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:46:54:0,46,1815:0,46,255:40,0 chr1 144615251 . A . PASS END=144615283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,101,1668:0,101,255:40,2 chr1 144615284 . C . PASS END=144615284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1837:0,79,255:40,0 chr1 144615285 . A . PASS END=144615289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,136,255:40,0 chr1 144615290 . A . PASS END=144615303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,134,255:40,0 chr1 144617150 . A . PASS END=144617156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,134,255:40,0 chr1 144617157 . A . PASS END=144617252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:54:0,120,1800:0,162,255:40,0 chr1 144618082 . G . PASS END=144618107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:73:0,120,1800:0,219,255:40,0 chr1 144618108 . A . PASS END=144618143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:86:0,120,1800:0,237,255:40,0 chr1 144618144 . A G, 39.33 PASS DP=94;MQ=52.75;MQRankSum=-7.115;ReadPosRankSum=6.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,56,0:0.596,0.000:94:16,30,0:22,26,0:38:74,0,42,1995,1301,3296:255,0,255:37,0:3.9334e+01,6.5445e-04,4.4673e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,23,23,33:19,19,25,31 chr1 144618145 . G . PASS END=144618200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,208,255:40,0 chr1 144618201 . T . LowGQ END=144618201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,12:73:0:73:0,0,1839:224,0,255:40,0 chr1 144618202 . G . PASS END=144618238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,117,1755:0,133,255:40,0 chr1 144618239 . G . PASS END=144618270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:32:0,81,1215:0,96,255:40,0 chr1 144618271 . G . PASS END=144618277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:29:0,71,1037:0,71,255:26,0 chr1 144618278 . G . PASS END=144618286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 144618287 . C . PASS END=144618296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 144619347 . A . PASS END=144619358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1399:0,107,255:40,0 chr1 144619359 . A . PASS END=144619359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:63:43:0,63,1287:0,63,255:38,0 chr1 144619360 . T . PASS END=144619383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1424:0,112,255:40,0 chr1 144619384 . G . PASS END=144619398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,130,255:40,0 chr1 144619399 . G . PASS END=144619399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1670:0,73,255:40,0 chr1 144619400 . C . PASS END=144619400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 144619401 . A . PASS END=144619401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1767:0,73,255:40,0 chr1 144619402 . G . PASS END=144619402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 144619403 . A . PASS END=144619403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1670:0,73,255:40,0 chr1 144619404 . A . PASS END=144619419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,128,255:40,0 chr1 144619883 . G . PASS END=144619889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 144619890 . C . PASS END=144619902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 144619903 . T A, 55.80 PASS DP=7;MQ=33.23;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,3,0:0,4,0:18:94,21,0,255,21,255:255,21,0:0,0:5.5796e+01,1.8129e+01,6.7365e-02,2.5252e+02,5.2899e+01,2.5552e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,5:0,0,4,3 chr1 144619904 . G . PASS END=144619912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,225:5,0 chr1 144619913 . C . PASS END=144619927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:3:0,9,94:0,9,94:3,0 chr1 144619928 . G . PASS END=144619934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:6,0 chr1 144619935 . T . PASS END=144619940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 144619941 . A . PASS END=144619945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 144619946 . T . PASS END=144619956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 144619957 . G . PASS END=144619964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 144619965 . C . LowGQ END=144619965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 144619966 . C . PASS END=144619966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 144619967 . T . PASS END=144619967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 144619968 . T . PASS END=144619971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 144619972 . A . PASS END=144619974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 144619975 . C . PASS END=144619975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 144619976 . C . PASS END=144619985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:13,0 chr1 144619986 . C . PASS END=144619987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 144619988 . C . PASS END=144619988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 144619989 . A . PASS END=144619999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 144620000 . A . PASS END=144620001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:11:14:0,11,390:0,11,255:13,0 chr1 144620002 . T . PASS END=144620002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 144620003 . C . PASS END=144620008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 144620009 . T C, 34.34 PASS DP=15;MQ=21.05;MQRankSum=1.240;ReadPosRankSum=2.285;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,11,0:0.733,0.000:15:2,7,0:2,4,0:28:69,0,26,385,143,528:255,0,110:4,0:3.4340e+01,7.1149e-03,2.8966e+01,3.8535e+02,1.7789e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,8,3:1,3,6,5 chr1 144620010 . G . PASS END=144620015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:19,0 chr1 144620016 . G . PASS END=144620019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 144620020 . A . PASS END=144620020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 144620021 . A . PASS END=144620021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 144620022 . G . PASS END=144620022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 144620023 . T . PASS END=144620026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:25,0 chr1 144620027 . C . PASS END=144620028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 144620029 . C . PASS END=144620040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,864:0,61,255:26,0 chr1 144620041 . T . PASS END=144620041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:24,0 chr1 144620042 . A . PASS END=144620059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,848:0,61,255:26,0 chr1 144620060 . T . PASS END=144620061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 144620062 . A . PASS END=144620062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 144620063 . T . PASS END=144620064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 144620065 . A . PASS END=144620075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,917:0,64,255:26,0 chr1 144620076 . G . PASS END=144620086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 144620087 . T . PASS END=144620087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 144620088 . C . PASS END=144620090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 144620091 . C T, 127.84 PASS DP=30;MQ=28.72;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,15,0:0,15,0:87:166,90,0,1126,90,1126:255,90,0:0,0:1.2784e+02,8.6838e+01,0.0000e+00,4.5000e+02,1.2161e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,19:0,0,14,16 chr1 144620092 . C . PASS END=144620094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 144621623 . G . PASS END=144621641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:87:0,120,1800:0,234,255:40,0 chr1 144621642 . A G, 32.78 PASS DP=87;MQ=66.13;MQRankSum=-2.748;ReadPosRankSum=-2.158;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:59,28,0:0.322,0.000:87:28,18,0:31,10,0:33:68,0,43,168,168,168:255,0,255:40,0:3.2778e+01,2.3920e-03,4.6352e+01,1.6755e+02,2.0232e+02,1.7056e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,45,11,17:31,28,13,15:144621642 chr1 144621643 . G A, 32.78 PASS DP=87;MQ=66.13;MQRankSum=-2.748;ReadPosRankSum=-2.103;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:59,28,0:0.322,0.000:87:28,18,0:31,10,0:33:68,0,43,168,168,168:255,0,255:40,0:3.2778e+01,2.3920e-03,4.6352e+01,1.6755e+02,2.0232e+02,1.7056e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,45,11,17:31,28,13,15:144621642 chr1 144621644 . C . PASS END=144621656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:66:0,120,1800:0,198,255:40,0 chr1 144811748 . T . PASS END=144811761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 144811762 . T . PASS END=144811762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:28,0 chr1 144811763 . C . PASS END=144811763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 144811764 . T . PASS END=144811764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 144811765 . T . PASS END=144811765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 144811766 . C . PASS END=144811774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:31,0 chr1 144811775 . A . PASS END=144811775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,904:0,76,255:30,0 chr1 144811776 . C . PASS END=144811798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:33:0,91,1205:0,91,255:40,0 chr1 144811799 . G . PASS END=144811809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,120,1800:0,129,255:40,0 chr1 144811810 . A . PASS END=144811810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:37:51:0,37,1714:0,37,255:40,0 chr1 144811811 . G . PASS END=144811822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1661:0,120,255:40,0 chr1 144811823 . A C, 0.05 DRAGENSnpHardQUAL DP=59;MQ=52.62;MQRankSum=-3.273;ReadPosRankSum=-0.439;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:53,6,0:0.102,0.000:59:31,4,0:22,2,0:19:16,0,43,143,143,143:33,0,255:40,0:5.1220e-02,1.9309e+01,6.5109e+01,1.6210e+02,1.9687e+02,1.6511e+02:0.00,34.77,37.78,34.77,69.54,37.78:35,18,5,1:29,24,3,3:144811823 chr1 144811824 . G . PASS END=144811826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:99:61:0,120,1800:0,139,255:40,0 chr1 144811827 . G A, 0.05 DRAGENSnpHardQUAL DP=63;MQ=52.93;MQRankSum=-3.220;ReadPosRankSum=-1.393;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:57,6,0:0.095,0.000:63:32,4,0:25,2,0:19:16,0,43,143,143,143:0,1,255:40,0:5.1220e-02,1.9309e+01,6.5109e+01,1.6210e+02,1.9687e+02,1.6511e+02:0.00,34.77,37.78,34.77,69.54,37.78:37,20,5,1:30,27,3,3:144811823 chr1 144811828 . A . PASS END=144811835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,185,255:40,0 chr1 144811856 . G . PASS END=144811875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,184,255:40,0 chr1 144811876 . A . PASS END=144811884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:78:0,120,1800:0,188,255:40,0 chr1 144811885 . T . PASS END=144811923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,195,255:40,0 chr1 144811924 . T G, 39.78 PASS DP=79;MQ=64.82;MQRankSum=-4.613;ReadPosRankSum=4.824;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,31,0:0.392,0.000:79:33,12,0:15,19,0:39:75,0,47,1109,1651,2760:255,0,255:40,0:3.9781e+01,5.0118e-04,4.9901e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,32,11,20:23,25,14,17 chr1 144811925 . C . PASS END=144811957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,186,255:40,0 chr1 144813743 . G . PASS END=144813786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,1:118:99:99:0,120,1800:0,241,255:40,0 chr1 144813787 . A . PASS END=144813823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:116:0,120,1800:0,170,255:40,0 chr1 144813824 . G C, 0.13 DRAGENSnpHardQUAL DP=116;MQ=44.62;MQRankSum=-5.921;ReadPosRankSum=6.722;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:98,18,0:0.155,0.000:116:37,8,0:61,10,0:15:20,0,45,644,3419,4063:255,0,255:40,0:1.3400e-01,1.5174e+01,6.3324e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:44,54,8,10:63,35,10,8 chr1 144813825 . A . PASS END=144813844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:108:0,120,1800:0,255,255:40,0 chr1 144814741 . C . PASS END=144814771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,159,255:40,0 chr1 144815936 . A . PASS END=144816008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,131,255:40,0 chr1 144816473 . G . PASS END=144816583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:136,0:136:99:92:0,120,1800:0,240,255:40,2 chr1 144816584 . A . PASS END=144816620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,0:134:99:125:0,120,1800:0,255,255:40,0 chr1 144816622 . C . PASS END=144816655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,2:96:99:72:0,120,1800:0,152,255:40,0 chr1 144816657 . G . PASS END=144816658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,207,255:40,0 chr1 144816659 . T . PASS END=144816678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,153,255:40,0 chr1 144817966 . A . PASS END=144817976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1085:0,88,255:34,0 chr1 144817977 . G . PASS END=144817977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:30,0 chr1 144817978 . A . PASS END=144817980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1179:0,88,255:32,0 chr1 144817981 . A . PASS END=144817981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:31,0 chr1 144817982 . T . PASS END=144818002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,998:0,82,255:33,0 chr1 144818003 . G . PASS END=144818013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:25,0 chr1 144818014 . C . PASS END=144818017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:26:0,54,810:0,78,255:18,0 chr1 144821921 . G . PASS END=144822084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:56:0,120,1800:0,144,255:40,0 chr1 144823128 . G . PASS END=144823134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:97:0,120,1800:0,252,255:40,0 chr1 144823135 . G . PASS END=144823135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,6:98:62:98:0,62,3173:0,62,255:40,0 chr1 144823136 . T . PASS END=144823179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:97:0,120,1800:0,255,255:40,0 chr1 144823813 . G . PASS END=144823813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 144823814 . C . PASS END=144823815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 144823816 . C . PASS END=144823839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:32,0 chr1 144823840 . A . PASS END=144823840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 144823841 . G . PASS END=144823867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1243:0,91,255:40,0 chr1 144823868 . T . PASS END=144823868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1807:0,79,255:40,0 chr1 144823869 . A . PASS END=144823985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,114,1710:0,118,255:40,0 chr1 144824705 . A . PASS END=144824705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 144824706 . A . PASS END=144824706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 144824707 . A . PASS END=144824707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 144824708 . T . PASS END=144824756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1078:0,87,255:31,0 chr1 144825353 . G . PASS END=144825357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 144825358 . G . PASS END=144825359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 144825360 . A . PASS END=144825360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 144825361 . G . PASS END=144825392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:19,0 chr1 144825393 . T . PASS END=144825395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 144825396 . C . PASS END=144825396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 144825397 . A . PASS END=144825415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:61:21:0,61,762:0,61,255:26,0 chr1 144825416 . G . PASS END=144825427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 144825428 . T . PASS END=144825435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 144825436 . A . PASS END=144825442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 144825443 . A . PASS END=144825443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:28,0 chr1 144825444 . C . PASS END=144825460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1186:0,93,255:32,0 chr1 144825461 . G . PASS END=144825461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 144825462 . C . PASS END=144825464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 144825465 . T . PASS END=144825505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,872:0,72,255:25,0 chr1 144825506 . C . PASS END=144825506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 144825507 . T . PASS END=144825513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 144825514 . T . PASS END=144825516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 144825517 . A . PASS END=144825518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 144825519 . T . PASS END=144825525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:19,0 chr1 144826971 . T . LowDepth;LowGQ END=144827105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 144833522 . T . PASS END=144833621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,101,1405:0,101,255:40,0 chr1 144852205 . T . PASS END=144852206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1194:0,86,255:33,0 chr1 144852207 . A . PASS END=144852207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:32,0 chr1 144852208 . G . PASS END=144852234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:37:0,103,1322:0,103,255:40,0 chr1 144852235 . T C, 37.61 PASS DP=47;MQ=75.61;MQRankSum=-5.192;ReadPosRankSum=-0.705;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:28,19,0:0.404,0.000:47:10,10,0:18,9,0:37:72,0,43,172,172,172:255,0,255:27,0:3.7608e+01,8.5406e-04,4.6351e+01,1.7238e+02,2.0715e+02,1.7539e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,10,17,2:12,16,10,9:144852235 chr1 144852236 . C G, 37.61 PASS DP=47;MQ=75.61;MQRankSum=-5.192;ReadPosRankSum=-0.726;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:28,19,0:0.404,0.000:47:10,10,0:18,9,0:37:72,0,43,172,172,172:255,0,255:27,0:3.7608e+01,8.5406e-04,4.6351e+01,1.7238e+02,2.0715e+02,1.7539e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,10,17,2:12,16,10,9:144852235 chr1 144852237 . G . PASS END=144852248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,144,255:40,0 chr1 144852249 . C T, 36.40 PASS DP=50;MQ=79.47;MQRankSum=-5.656;ReadPosRankSum=1.499;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:31,19,0:0.380,0.000:50:12,11,0:19,8,0:36:71,0,44,171,171,171:255,0,255:31,0:3.6398e+01,1.0894e-03,4.6651e+01,1.7117e+02,2.0594e+02,1.7418e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,12,17,2:18,13,11,8:144852249 chr1 144852250 . G . PASS END=144852253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr1 144852254 . G C, 36.40 PASS DP=52;MQ=79.85;MQRankSum=-5.746;ReadPosRankSum=3.470;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:32,20,0:0.385,0.000:52:13,11,0:19,9,0:36:71,0,44,171,171,171:255,0,255:32,0:3.6398e+01,1.0894e-03,4.6651e+01,1.7117e+02,2.0594e+02,1.7418e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,12,18,2:19,13,11,9:144852249 chr1 144852255 . A . PASS END=144852287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,143,255:40,0 chr1 144852288 . G . PASS END=144852314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:63:0,120,1800:0,163,255:40,0 chr1 144852315 . C . LowGQ END=144852315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,11:85:0:85:0,0,2418:149,0,255:40,0 chr1 144852316 . C . PASS END=144852320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,4:85:91:82:0,91,1800:0,91,255:40,0 chr1 144852321 . C A, 44.75 PASS DP=82;MQ=71.47;MQRankSum=-6.525;ReadPosRankSum=3.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,47,0:0.573,0.000:82:18,27,0:17,20,0:41:80,0,41,180,180,180:255,0,255:34,0:4.4750e+01,3.1038e-04,4.4204e+01,1.7952e+02,2.1429e+02,1.8253e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,15,42,5:17,18,28,19 chr1 144852322 . G . PASS END=144852325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,4:87:90:87:0,90,1800:0,90,255:40,0 chr1 144852326 . A . PASS END=144852327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,5:90:60:90:0,60,2865:0,60,255:40,0 chr1 144852328 . T . PASS END=144852328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,6:87:51:87:0,51,2657:0,51,255:40,0 chr1 144852329 . T . PASS END=144852330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,5:90:73:89:0,73,2851:0,73,255:40,0 chr1 144852331 . G . PASS END=144852333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:85:90:0,85,1800:0,85,255:40,0 chr1 144852334 . G . PASS END=144852334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,6:90:38:90:0,38,2931:0,38,255:40,0 chr1 144852335 . A . PASS END=144852335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,8:91:7:91:0,7,2772:0,7,255:40,0 chr1 144852336 . A . PASS END=144852337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,6:92:44:92:0,44,2942:0,44,255:40,0 chr1 144852338 . G . PASS END=144852338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr1 144852339 . A . PASS END=144852339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,6:93:47:93:0,47,3040:0,47,255:40,0 chr1 144852340 . G . PASS END=144852340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,6:96:64:96:0,64,3210:0,64,255:40,0 chr1 144852341 . G . LowGQ END=144852341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,8:100:0:100:0,0,3143:10,0,255:40,0 chr1 144852342 . C . PASS END=144852345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,1:105:99:102:0,109,1800:0,109,255:40,0 chr1 144852346 . G . LowGQ END=144852350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,9:108:0:106:0,0,3234:0,0,255:40,0 chr1 144852351 . T . PASS END=144852351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,9:113:13:113:0,13,3590:0,13,255:40,0 chr1 144852352 . C . PASS END=144852352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:115:0,120,1800:0,255,255:40,0 chr1 144852353 . C . LowGQ END=144852356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,17:123:0:114:0,0,3267:0,0,255:40,0 chr1 144852357 . G . PASS END=144852357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,0:128:99:128:0,120,1800:0,255,255:40,0 chr1 144852358 . C . LowGQ END=144852358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,20:126:0:126:0,0,3189:255,0,255:40,0 chr1 144852359 . A . PASS END=144852359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,0:125:99:125:0,120,1800:0,255,255:40,0 chr1 144852360 . G . LowGQ END=144852360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,21:127:0:127:0,0,3255:255,0,255:40,0 chr1 144852361 . A . PASS END=144852361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,1:129:99:129:0,120,1800:0,255,255:40,0 chr1 144852362 . T . LowGQ END=144852365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,22:130:0:129:0,0,3011:255,0,255:40,0 chr1 144852366 . T . PASS END=144852367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:130,1:131:99:130:0,120,1800:0,255,255:40,0 chr1 144852368 . G . LowGQ END=144852372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,22:132:0:130:0,0,3128:255,0,255:40,0 chr1 144852373 . A . PASS END=144852373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,0:134:99:134:0,120,1800:0,255,255:40,0 chr1 144852374 . C . LowGQ END=144852376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,22:134:0:134:0,0,3295:211,0,255:40,0 chr1 144852377 . A . PASS END=144852377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:139,1:140:99:140:0,120,1800:0,255,255:40,0 chr1 144852378 . A . LowGQ END=144852378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,25:142:0:142:0,0,3351:255,0,255:40,0 chr1 144852379 . G T, 32.46 PASS DP=125;MQ=64.14;MQRankSum=-3.220;ReadPosRankSum=2.008;FractionInformativeReads=0.928;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:80,36,0:0.310,0.000:116:42,24,0:38,12,0:32:67,0,46,1163,2856,4019:255,0,255:40,0:3.2462e+01,2.5236e-03,4.8653e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:47,33,30,6:43,37,22,14 chr1 144852380 . G . LowGQ END=144852380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,24:142:0:142:0,0,3568:255,0,255:40,0 chr1 144852381 . G . PASS END=144852381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:140,2:142:99:142:0,120,1800:0,255,255:40,0 chr1 144852382 . G . LowGQ END=144852383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,24:144:0:143:0,0,3355:255,0,255:40,0 chr1 144852384 . A . PASS END=144852385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:143,1:144:99:143:0,120,1800:0,255,255:40,0 chr1 144852386 . A . LowGQ END=144852389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,23:150:0:142:0,0,3504:255,0,255:40,0 chr1 144852390 . C T, 45.20 PASS DP=135;MQ=61.88;MQRankSum=-5.073;ReadPosRankSum=1.602;FractionInformativeReads=0.919;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,77,0:0.621,0.000:124:25,42,0:22,35,0:42:80,0,41,2673,1652,4325:255,0,255:40,0:4.5200e+01,2.9330e-04,4.4282e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,22,43,34:29,18,38,39 chr1 144852391 . C . LowGQ END=144852391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,26:155:0:155:0,0,3866:255,0,255:40,0 chr1 144852392 . A . PASS END=144852393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:157,0:157:99:156:0,120,1800:0,255,255:40,0 chr1 144852394 . C . LowGQ END=144852395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,39:168:0:157:0,0,3414:255,0,255:40,0 chr1 144852396 . T . PASS END=144852396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:168,0:168:99:168:0,120,1800:0,255,255:40,0 chr1 144852397 . T . LowGQ END=144852399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,41:170:0:170:0,0,3168:255,0,255:40,0 chr1 144852400 . T . PASS END=144852400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:170,0:170:99:170:0,120,1800:0,255,255:40,0 chr1 144852401 . G . LowGQ END=144852401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,41:170:0:170:0,0,3337:255,0,255:40,0 chr1 144852402 . C . PASS END=144852402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:173,1:174:99:174:0,120,1800:0,255,255:40,0 chr1 144852403 . T . LowGQ END=144852405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:141,42:183:0:173:0,0,3375:255,0,255:40,0 chr1 144852406 . T . PASS END=144852406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:181,3:184:99:184:0,120,1800:0,255,255:40,0 chr1 144852407 . T . LowGQ END=144852407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:141,44:185:0:185:0,0,3617:255,0,255:40,0 chr1 144852408 . T . PASS END=144852434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:191,1:192:99:185:0,120,1800:0,255,255:40,0 chr1 144852435 . G A, 3.82 DRAGENSnpHardQUAL DP=185;MQ=58.25;MQRankSum=4.011;ReadPosRankSum=-0.036;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:159,25,0:0.136,0.000:184:90,11,0:69,14,0:4:36,0,45,886,5583,6469:255,0,255:40,0:3.8164e+00,2.3307e+00,5.0531e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:72,87,13,12:81,78,9,16 chr1 144852436 . C . PASS END=144852449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:200,0:200:99:195:0,120,1800:0,255,255:40,0 chr1 144852450 . G A, 19.94 PASS DP=190;MQ=59.44;MQRankSum=-5.171;ReadPosRankSum=0.005;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:144,44,0:0.234,0.000:188:73,26,0:71,18,0:20:55,0,46,1529,5103,6632:255,0,255:40,0:1.9935e+01,4.4355e-02,4.9494e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:68,76,16,28:79,65,16,28 chr1 144852451 . G . PASS END=144852475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:200,0:200:99:197:0,120,1800:0,255,255:40,0 chr1 144852476 . T C, 47.35 PASS DP=191;MQ=64.16;MQRankSum=-5.519;ReadPosRankSum=0.386;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:57,133,0:0.700,0.000:190:25,70,0:32,63,0:40:82,0,38,182,182,182:255,0,255:40,0:4.7350e+01,4.3309e-04,4.0897e+01,1.8212e+02,2.1689e+02,1.8513e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,31,43,90:26,31,78,55 chr1 144852477 . G . LowGQ END=144852477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:139,56:195:0:195:0,0,3186:255,0,255:40,0 chr1 144852478 . G . PASS END=144852499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:173,1:174:99:163:0,120,1800:0,255,255:40,0 chr1 144853219 . C . PASS END=144853247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:149,0:149:99:134:0,120,1800:0,255,255:40,0 chr1 144853248 . G C, 32.43 PASS DP=161;MQ=126.49;MQRankSum=-7.320;ReadPosRankSum=5.368;FractionInformativeReads=0.994;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:113,47,0:0.294,0.000:160:60,25,0:53,22,0:32:67,0,49,1672,3987,5659:255,0,255:40,0:3.2427e+01,2.5101e-03,5.2303e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:63,50,23,24:68,45,25,22 chr1 144853249 . A . PASS END=144853270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:161,0:161:99:157:0,120,1800:0,255,255:40,0 chr1 144854165 . C . PASS END=144854179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:226,0:226:99:222:0,120,1800:0,255,255:40,0 chr1 144854180 . T C, 40.55 PASS DP=225;MQ=111.64;MQRankSum=-9.498;ReadPosRankSum=6.732;FractionInformativeReads=0.996;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:145,79,0:0.353,0.000:224:67,34,0:78,45,0:40:75,0,49,2759,5038,7797:255,0,255:40,0:4.0548e+01,4.0772e-04,5.2400e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:82,63,39,40:78,67,36,43 chr1 144854181 . G . PASS END=144854211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:222,1:223:99:202:0,120,1800:0,255,255:40,0 chr1 144854518 . G . PASS END=144854527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:165,1:166:99:157:0,120,1800:0,255,255:40,0 chr1 144854528 . A G, 29.80 PASS DP=174;MQ=156.76;MQRankSum=-10.231;ReadPosRankSum=-1.119;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:124,50,0:0.287,0.000:174:57,19,0:67,31,0:30:65,0,50,1741,4221,5962:255,0,255:40,0:2.9804e+01,4.5679e-03,5.3005e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:72,52,33,17:57,67,22,28:144854528 chr1 144854529 . A . PASS END=144854536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:183,3:186:99:173:0,120,1800:0,255,255:40,0 chr1 144854537 . T C, 27.15 PASS DP=204;MQ=160.94;MQRankSum=-10.856;ReadPosRankSum=-1.082;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:149,55,0:0.270,0.000:204:71,22,0:78,33,0:27:62,0,50,1938,5220,7158:255,0,255:40,0:2.7151e+01,8.3988e-03,5.3008e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:97,52,31,24:71,78,26,29:144854528 chr1 144854538 . T . PASS END=144854580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:223,2:225:99:209:0,120,1800:0,255,255:40,0 chr1 144854581 . T C, 30.25 PASS DP=240;MQ=162.12;MQRankSum=-11.663;ReadPosRankSum=0.980;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:173,67,0:0.279,0.000:240:87,33,0:86,34,0:30:65,0,50,2348,6067,8415:255,0,255:40,0:3.0251e+01,4.1233e-03,5.3004e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:97,76,31,36:89,84,35,32:144854581 chr1 144854582 . T . PASS END=144854593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:242,1:243:99:240:0,120,1800:0,255,255:40,0 chr1 144854594 . G T, 46.14 PASS DP=235;MQ=161.29;MQRankSum=-11.644;ReadPosRankSum=1.092;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:166,69,0:0.294,0.000:235:85,34,0:81,35,0:45:81,0,47,181,181,181:255,0,255:40,0:4.6142e+01,1.4911e-04,5.0000e+01,1.8091e+02,2.1568e+02,1.8392e+02:0.00,34.77,37.78,34.77,69.54,37.78:83,83,34,35:86,80,43,26:144854581 chr1 144854595 . A . PASS END=144854596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:235,1:236:99:236:0,120,1800:0,255,255:40,0 chr1 144854597 . T C, 46.14 PASS DP=232;MQ=161.13;MQRankSum=-12.114;ReadPosRankSum=-0.481;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:93,139,0:0.599,0.000:232:53,63,0:40,76,0:45:81,0,47,181,181,181:255,0,255:40,0:4.6142e+01,1.4911e-04,5.0000e+01,1.8091e+02,2.1568e+02,1.8392e+02:0.00,34.77,37.78,34.77,69.54,37.78:45,48,71,68:49,44,79,60 chr1 144854598 . C . LowGQ END=144854598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:164,70:234:0:234:0,0,3606:255,0,255:40,0 chr1 144854599 . G . PASS END=144854649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:214,1:215:99:200:0,120,1800:0,255,255:40,1 chr1 144854650 . A . PASS END=144854656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:198,0:198:99:195:0,120,1800:0,255,255:40,0 chr1 144855740 . C . PASS END=144855774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:70:0,120,1800:0,203,255:40,0 chr1 144855775 . G . PASS END=144855811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:94:0,120,1800:0,247,255:40,0 chr1 144855812 . T C, 43.41 PASS DP=99;MQ=90.19;MQRankSum=-7.112;ReadPosRankSum=4.825;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:57,42,0:0.424,0.000:99:30,23,0:27,19,0:43:78,0,47,1473,2038,3511:255,0,255:40,0:4.3405e+01,2.3971e-04,5.0200e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,30,17,25:28,29,20,22 chr1 144855813 . G . PASS END=144855865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,188,255:40,0 chr1 144855866 . A G, 41.73 PASS DP=68;MQ=89.62;MQRankSum=-6.523;ReadPosRankSum=-0.181;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,28,0:0.412,0.000:68:23,14,0:17,14,0:41:77,0,49,993,1394,2387:255,0,255:37,0:4.1734e+01,3.2022e-04,5.1750e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,22,9,19:21,19,11,17 chr1 144855867 . C . PASS END=144855883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,187,255:40,0 chr1 144856816 . C . PASS END=144857030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:48:0,120,1800:0,137,255:40,0 chr1 144857031 . C . PASS END=144857042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,183,255:40,0 chr1 144857612 . C . PASS END=144857728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,99,1485:0,138,255:40,0 chr1 144859759 . C . PASS END=144859988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:61:0,120,1800:0,150,255:40,0 chr1 144859989 . A . PASS END=144859998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:73:0,120,1800:0,184,255:40,0 chr1 144863318 . C . PASS END=144863363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:89:0,120,1800:0,209,255:40,0 chr1 144863364 . T . PASS END=144863400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:112:0,120,1800:0,255,255:40,0 chr1 144863401 . T C, 40.40 PASS DP=113;MQ=81.27;MQRankSum=0.870;ReadPosRankSum=2.452;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:71,41,0:0.366,0.000:112:38,14,0:33,27,0:40:75,0,47,1385,2483,3868:255,0,255:40,0:4.0396e+01,4.4526e-04,4.9500e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:42,29,22,19:37,34,19,22 chr1 144863402 . C . PASS END=144863437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:87:0,120,1800:0,243,255:40,0 chr1 144863438 . G . PASS END=144863438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,6:87:67:87:0,67,2871:0,67,255:40,0 chr1 144863439 . C . PASS END=144863442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,225,255:40,0 chr1 144864135 . C . PASS END=144864147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,232,255:40,0 chr1 144864148 . C . LowGQ END=144864148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,16:84:0:84:0,0,1358:17,0,255:40,0 chr1 144864149 . C . PASS END=144864159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:85:0,120,1800:0,120,255:40,0 chr1 144864160 . G . PASS END=144864160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,12:91:71:91:0,71,1836:0,71,255:40,0 chr1 144864161 . A . PASS END=144864165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,103,1800:0,103,255:40,0 chr1 144864166 . C . PASS END=144864166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,13:93:61:93:0,61,2104:0,61,255:40,0 chr1 144864167 . C . PASS END=144864171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,3:95:99:93:0,120,1800:0,151,255:40,0 chr1 144864172 . T . PASS END=144864172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,14:97:7:97:0,7,2301:0,7,255:40,0 chr1 144864173 . G . PASS END=144864176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:97:0,120,1800:0,224,255:40,0 chr1 144864177 . T . LowGQ END=144864177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,14:103:0:103:0,0,2546:25,0,255:40,0 chr1 144864178 . G . PASS END=144864216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:83:103:0,83,1800:0,83,255:40,0 chr1 144864217 . G . PASS END=144864217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,13:109:75:109:0,75,3202:0,75,255:40,0 chr1 144864218 . C . PASS END=144864324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:64:0,120,1800:0,176,255:40,0 chr1 144865810 . C . PASS END=144865812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,255,255:40,0 chr1 144865813 . T . PASS END=144865849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:87:0,120,1800:0,248,255:40,0 chr1 144865850 . G T, 49.00 PASS DP=100;MQ=164.11;MQRankSum=-6.271;ReadPosRankSum=5.746;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,53,0:0.530,0.000:100:20,30,0:27,23,0:47:84,0,50,1859,1652,3511:255,0,255:40,0:4.9000e+01,7.7917e-05,5.2687e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,21,23,30:21,26,32,21 chr1 144865851 . T . PASS END=144865887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:101:0,120,1800:0,255,255:40,0 chr1 144865888 . G . PASS END=144865929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:78:0,120,1800:0,199,255:40,0 chr1 144866592 . C . PASS END=144866605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:72:0,120,1800:0,206,255:40,0 chr1 144866606 . G . PASS END=144866642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:94:0,120,1800:0,255,255:40,0 chr1 144866643 . G A, 50.00 PASS DP=103;MQ=245.74;MQRankSum=5.077;ReadPosRankSum=6.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,59,0:0.573,0.000:103:19,24,0:25,35,0:48:85,0,48,2081,1545,3626:255,0,255:40,0:5.0000e+01,7.6623e-05,5.1156e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,16,35,24:17,27,28,31 chr1 144866644 . G . PASS END=144866661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:102:0,120,1800:0,255,255:40,0 chr1 144866662 . T C, 50.00 PASS DP=109;MQ=247.70;MQRankSum=5.911;ReadPosRankSum=3.960;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,63,0:0.578,0.000:109:21,28,0:25,35,0:47:85,0,48,2216,1645,3861:255,0,255:40,0:5.0000e+01,7.8435e-05,5.0943e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,17,25,38:20,26,34,29 chr1 144866663 . T . PASS END=144866699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:90:0,120,1800:0,250,255:40,0 chr1 144866700 . G . PASS END=144866723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,211,255:40,0 chr1 144867921 . C . PASS END=144868132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:52:0,120,1800:0,139,255:40,0 chr1 144868133 . A . PASS END=144868169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:70:0,120,1800:0,163,255:40,0 chr1 144868170 . C T, 50.00 PASS DP=69;MQ=196.51;MQRankSum=1.236;ReadPosRankSum=3.577;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,38,0:0.551,0.000:69:19,24,0:12,14,0:48:85,0,49,1329,1099,2428:255,0,255:22,0:5.0000e+01,6.9634e-05,5.2173e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,23,17,21:12,19,19,19 chr1 144868171 . A . PASS END=144868172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,195,255:40,0 chr1 144871696 . T . PASS END=144871696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 144871697 . T . PASS END=144871697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 144871698 . T . PASS END=144871700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,887:0,78,255:26,0 chr1 144871701 . C . PASS END=144871718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,895:0,62,255:26,0 chr1 144871719 . A . PASS END=144871724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 144871725 . A . PASS END=144871725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 144871726 . G . PASS END=144871737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:32,0 chr1 144871738 . C A, 47.25 PASS DP=32;MQ=136.07;MQRankSum=-3.852;ReadPosRankSum=3.323;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:15,17,0:0.531,0.000:32:9,9,0:6,8,0:46:82,0,49,563,536,1100:255,0,255:15,0:4.7250e+01,1.1105e-04,5.1735e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,9,8:5,10,7,10:144871738 chr1 144871739 . C . PASS END=144871754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:32:0,96,1180:0,96,255:36,0 chr1 144871755 . A T, 49.30 PASS DP=37;MQ=142.62;MQRankSum=-2.652;ReadPosRankSum=0.904;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:16,21,0:0.568,0.000:37:9,12,0:7,9,0:47:84,0,49,751,572,1323:255,0,255:16,0:4.9300e+01,8.1542e-05,5.1528e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,14,7:6,10,11,10:144871738 chr1 144871756 . C . PASS END=144871775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:97:35:0,97,1125:0,97,255:36,0 chr1 144871776 . A . PASS END=144871776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:33,0 chr1 144871777 . G . PASS END=144871781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:35,0 chr1 144871782 . A G, 50.00 PASS DP=37;MQ=152.58;MQRankSum=-2.805;ReadPosRankSum=0.996;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,21,0:0.568,0.000:37:10,13,0:6,8,0:46:85,0,46,185,185,185:255,0,255:14,0:5.0000e+01,1.0096e-04,4.8779e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,11,11,10:7,9,11,10 chr1 144871783 . G . PASS END=144871797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,96,255:33,0 chr1 144871798 . T . PASS END=144871798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 144871799 . G . PASS END=144871808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1180:0,93,255:31,0 chr1 144871809 . A . PASS END=144871819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 144871820 . A . PASS END=144871841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 144871842 . G . PASS END=144871842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 144871843 . G . PASS END=144871847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 144871848 . C . PASS END=144871848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 144871849 . T . PASS END=144871851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 144871852 . C . PASS END=144871852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 144871853 . C . PASS END=144871881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 144873877 . C . PASS END=144873886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,3:96:99:92:0,120,1800:0,239,255:40,0 chr1 144873887 . C T, 50.00 PASS DP=105;MQ=190.39;MQRankSum=0.138;ReadPosRankSum=4.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,57,0:0.543,0.000:105:22,28,0:26,29,0:48:85,0,49,1968,1680,3648:255,0,255:40,0:5.0000e+01,6.8598e-05,5.2366e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,18,34,23:22,26,29,28 chr1 144873888 . T . PASS END=144873924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,1:126:99:111:0,120,1800:0,255,255:40,0 chr1 144873925 . A . PASS END=144874000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:156,2:158:99:119:0,120,1800:0,255,255:40,0 chr1 144874001 . A . PASS END=144874029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:86:0,120,1800:0,248,255:40,0 chr1 144874681 . C . PASS END=144874722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:79:0,120,1800:0,228,255:40,0 chr1 144874723 . A . PASS END=144874759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:110:0,120,1800:0,255,255:40,0 chr1 144874760 . T C, 48.80 PASS DP=120;MQ=161.54;MQRankSum=-8.789;ReadPosRankSum=7.125;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:60,60,0:0.500,0.000:120:33,35,0:27,25,0:47:84,0,50,2130,1999,4129:255,0,255:40,0:4.8800e+01,7.8953e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,37,27,33:30,30,32,28 chr1 144874761 . T . PASS END=144874814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,0:125:99:117:0,120,1800:0,255,255:40,0 chr1 144874815 . T C, 48.80 PASS DP=119;MQ=156.94;MQRankSum=-7.226;ReadPosRankSum=4.861;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:59,60,0:0.504,0.000:119:31,32,0:28,28,0:47:84,0,50,2076,2102,4178:255,0,255:40,0:4.8800e+01,7.8953e-05,5.2997e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,39,31,29:32,27,29,31 chr1 144874816 . G . PASS END=144874852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:87:0,120,1800:0,240,255:40,0 chr1 144874853 . G . PASS END=144874904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,171,255:40,0 chr1 144875977 . C . PASS END=144876028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,0:123:99:112:0,120,1800:0,255,255:40,0 chr1 144877036 . T . PASS END=144877138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,149,255:40,0 chr1 144877139 . G . PASS END=144877175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:72:0,120,1800:0,200,255:40,0 chr1 144877176 . C T, 46.82 PASS DP=79;MQ=99.47;MQRankSum=-4.425;ReadPosRankSum=5.537;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,36,0:0.456,0.000:79:25,16,0:18,20,0:45:82,0,48,1214,1538,2751:255,0,255:40,0:4.6822e+01,1.2322e-04,5.1200e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,25,19,17:20,23,17,19 chr1 144877177 . G . PASS END=144877213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,120,1800:0,184,255:40,0 chr1 144877214 . T . PASS END=144877271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,120,255:40,0 chr1 144879035 . C . PASS END=144879052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,150,255:40,0 chr1 144879053 . C . PASS END=144879089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,168,255:40,0 chr1 144879090 . T C, 49.60 PASS DP=71;MQ=142.97;MQRankSum=-0.996;ReadPosRankSum=4.345;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,37,0:0.521,0.000:71:15,20,0:19,17,0:48:84,0,49,1323,1208,2531:255,0,255:34,0:4.9600e+01,7.2481e-05,5.2443e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,16,23,14:19,15,20,17 chr1 144879091 . T . PASS END=144879127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:71:0,120,1800:0,203,255:40,0 chr1 144879128 . A . PASS END=144879226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:97:0,120,1800:0,255,255:40,0 chr1 144879227 . G . PASS END=144879263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,1:130:99:124:0,120,1800:0,255,255:40,0 chr1 144879264 . A G, 447.03 PASS DP=133;MQ=158.18;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,133,0:1.000,0.000:133:0,61,0:0,72,0:397:485,400,0,5119,400,5119:255,255,0:0,0:4.4853e+02,3.9728e+02,0.0000e+00,4.4853e+02,4.3200e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,81,52:0,0,59,74 chr1 144879265 . G . PASS END=144879338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:140,0:140:99:131:0,120,1800:0,255,255:40,0 chr1 144879339 . C T, 27.74 PASS DP=149;MQ=148.72;MQRankSum=-1.852;ReadPosRankSum=-0.332;FractionInformativeReads=0.993;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:115,33,0:0.223,0.000:148:56,15,0:59,18,0:28:63,0,47,163,163,163:255,0,255:40,0:2.7742e+01,7.3586e-03,4.9607e+01,1.6251e+02,1.9728e+02,1.6552e+02:0.00,34.77,37.78,34.77,69.54,37.78:85,30,22,11:62,53,14,19 chr1 144879340 . C . PASS END=144879374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:148,1:149:99:141:0,120,1800:0,255,255:40,0 chr1 144879375 . T C, 49.71 PASS DP=141;MQ=149.19;MQRankSum=-1.235;ReadPosRankSum=1.623;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:72,69,0:0.489,0.000:141:39,29,0:33,40,0:48:84,0,50,2415,2531,4946:255,0,255:40,0:4.9712e+01,6.9375e-05,5.2750e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:44,28,31,38:35,37,33,36 chr1 144879376 . G . PASS END=144879412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,1:139:99:136:0,120,1800:0,255,255:40,0 chr1 144879413 . C . PASS END=144879563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:124,0:124:99:56:0,120,1800:0,158,255:40,0 chr1 144880742 . C . PASS END=144880794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:104:0,120,1800:0,255,255:40,0 chr1 144880795 . T . PASS END=144880831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,1:116:99:106:0,120,1800:0,255,255:40,0 chr1 144880832 . T C, 50.00 PASS DP=104;MQ=216.12;MQRankSum=1.134;ReadPosRankSum=4.522;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,52,0:0.500,0.000:104:28,28,0:24,24,0:48:85,0,50,1860,1825,3685:255,0,255:40,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,27,24,28:31,21,24,28 chr1 144880833 . G . PASS END=144880861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:82:0,120,1800:0,191,255:40,0 chr1 144881430 . T . PASS END=144881622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:162,1:163:99:101:0,120,1800:0,248,255:40,2 chr1 144882446 . T . PASS END=144882543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:43:0,116,1606:0,116,255:40,0 chr1 144882544 . T . PASS END=144882580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:91:0,120,1800:0,255,255:40,0 chr1 144882581 . A G, 45.41 PASS DP=104;MQ=120.59;MQRankSum=-6.890;ReadPosRankSum=5.330;FractionInformativeReads=0.990;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:59,44,0:0.427,0.000:103:29,20,0:30,24,0:45:80,0,50,1537,2065,3602:255,0,255:40,0:4.5407e+01,1.4678e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:42,17,29,15:36,23,23,21 chr1 144882582 . A . PASS END=144882618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,1:121:99:104:0,120,1800:0,255,255:40,0 chr1 144882619 . G . PASS END=144882785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:142,0:142:99:120:0,120,1800:0,255,255:40,0 chr1 144882786 . T . PASS END=144882822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:150,0:150:99:146:0,120,1800:0,255,255:40,0 chr1 144882823 . C T, 49.74 PASS DP=146;MQ=243.31;MQRankSum=7.240;ReadPosRankSum=7.342;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:77,69,0:0.473,0.000:146:36,30,0:41,39,0:48:85,0,50,2449,2741,5190:255,0,255:40,0:4.9735e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,49,28,41:39,38,41,28 chr1 144882824 . T . PASS END=144882860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:133,0:133:99:123:0,120,1800:0,255,255:40,0 chr1 144882861 . C . PASS END=144882881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:98:0,120,1800:0,255,255:40,0 chr1 144886097 . C . PASS END=144886129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:77:0,120,1800:0,213,255:40,0 chr1 144886130 . T . PASS END=144886159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,1:118:99:115:0,120,1800:0,255,255:40,0 chr1 144886160 . T . PASS END=144886196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:117:0,120,1800:0,255,255:40,0 chr1 144886197 . A T, 49.77 PASS DP=120;MQ=249.99;MQRankSum=9.433;ReadPosRankSum=5.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:63,57,0:0.475,0.000:120:27,24,0:36,33,0:48:85,0,50,1868,2156,4024:255,0,255:40,0:4.9770e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:34,29,30,27:28,35,33,24 chr1 144886198 . C . PASS END=144886234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:104:0,120,1800:0,255,255:40,0 chr1 144886235 . C . PASS END=144886329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:62:0,120,1800:0,157,255:40,1 chr1 144890975 . C . PASS END=144890989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,200,255:40,0 chr1 144892214 . C . PASS END=144892219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:76:0,120,1800:0,195,255:40,0 chr1 144892438 . T . PASS END=144892589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:163,0:163:99:109:0,120,1800:0,255,255:40,0 chr1 144892869 . C . PASS END=144892891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:108:0,120,1800:0,255,255:40,0 chr1 144892892 . T . PASS END=144892913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:149,1:150:99:129:0,120,1800:0,255,255:40,0 chr1 144892914 . C . PASS END=144892950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:157,1:158:99:155:0,120,1800:0,255,255:40,0 chr1 144892951 . C T, 49.25 PASS DP=153;MQ=145.80;MQRankSum=-1.773;ReadPosRankSum=0.940;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:74,79,0:0.516,0.000:153:36,43,0:38,36,0:48:84,0,50,2764,2535,5299:255,0,255:40,0:4.9250e+01,7.5329e-05,5.2593e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,44,45,34:40,34,39,40 chr1 144892952 . A . PASS END=144892988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:154,0:154:99:143:0,120,1800:0,255,255:40,0 chr1 144892989 . T . PASS END=144893088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:60:0,120,1800:0,148,255:40,0 chr1 144895264 . T . PASS END=144895290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,1:135:99:131:0,120,1800:0,255,255:40,0 chr1 144903030 . T . PASS END=144903192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1201:0,82,255:40,0 chr1 144903193 . T . PASS END=144903204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,945:0,81,255:26,0 chr1 144904625 . C . PASS END=144904625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr1 144904626 . T . PASS END=144904626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 144904627 . C . PASS END=144904627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 144904628 . T . PASS END=144904628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 144904629 . C . PASS END=144904631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 144904632 . G . PASS END=144904632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 144904633 . A . PASS END=144904633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,792:0,41,255:21,0 chr1 144904634 . T . PASS END=144904635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 144904636 . G . PASS END=144904636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr1 144904637 . G . PASS END=144904639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,856:0,42,255:25,0 chr1 144904640 . T . PASS END=144904641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 144904642 . G . PASS END=144904644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:25,0 chr1 144904645 . C . PASS END=144904646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 144904647 . T . PASS END=144904648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 144904649 . A . PASS END=144904649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 144904650 . C . PASS END=144904650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 144904651 . C . PASS END=144904651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:26,0 chr1 144904652 . A . PASS END=144904656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:28,0 chr1 144904657 . G . PASS END=144904657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 144904658 . C . PASS END=144904662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:30,0 chr1 144904663 . G . PASS END=144904664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 144904665 . G . PASS END=144904665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 144904666 . C . PASS END=144904666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:33,0 chr1 144904667 . T . PASS END=144904667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr1 144904668 . G . PASS END=144904668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 144904669 . T . PASS END=144904669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1122:0,66,255:33,0 chr1 144904670 . C . PASS END=144904670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1308:0,59,255:35,0 chr1 144904671 . T . PASS END=144904672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,105,1575:0,114,255:36,0 chr1 144904673 . T . PASS END=144904676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr1 144904677 . C . PASS END=144904677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 144904678 . T . PASS END=144904681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:76:38:0,76,1372:0,76,255:34,0 chr1 144904682 . A . PASS END=144904682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 144904683 . A . PASS END=144904683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr1 144904684 . G . PASS END=144904684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 144904685 . G . PASS END=144904685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr1 144904686 . C . PASS END=144904686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 144904687 . C . PASS END=144904687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr1 144904688 . T . PASS END=144904688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 144904689 . C . PASS END=144904692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:36,0 chr1 144904693 . G . PASS END=144904693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 144904694 . A . PASS END=144904697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:34,0 chr1 144904698 . G . PASS END=144904699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 144904700 . C . PASS END=144904700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr1 144904701 . T . PASS END=144904737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1213:0,102,255:34,0 chr1 144906059 . C . PASS END=144906075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,124,255:40,0 chr1 144906076 . C . PASS END=144906076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1688:0,78,255:40,0 chr1 144906077 . T . PASS END=144906184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:35:0,87,1305:0,105,255:40,0 chr1 144906185 . C . PASS END=144906185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:29,0 chr1 144906186 . A . PASS END=144906190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,89,255:30,0 chr1 144906191 . C . PASS END=144906196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:25,0 chr1 144906421 . C . PASS END=144906424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 144906425 . A . PASS END=144906425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 144906426 . T . PASS END=144906429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 144906430 . A . PASS END=144906430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,956:0,56,255:28,0 chr1 144906431 . T . PASS END=144906537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:29:0,83,1041:0,83,255:40,0 chr1 144909869 . C . PASS END=144909960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,0:131:99:84:0,120,1800:0,232,255:40,0 chr1 144911882 . C . PASS END=144911963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:165,0:165:99:129:0,120,1800:0,255,255:40,0 chr1 144912130 . T . PASS END=144912152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:107:0,120,1800:0,255,255:40,0 chr1 144912153 . A G, 50.00 PASS DP=114;MQ=205.41;MQRankSum=-5.420;ReadPosRankSum=3.266;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,81,0:0.717,0.000:113:15,40,0:17,41,0:38:85,0,35,185,185,185:255,0,255:29,0:5.0001e+01,6.8862e-04,3.8282e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,15,36,45:20,12,43,38 chr1 144912154 . G . PASS END=144912232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,1:123:99:109:0,120,1800:0,255,255:40,0 chr1 144912233 . C T, 47.14 PASS DP=111;MQ=201.71;MQRankSum=-3.550;ReadPosRankSum=3.429;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:65,45,0:0.409,0.000:110:28,33,0:37,12,0:46:82,0,50,1593,2323,3916:255,0,255:40,0:4.7138e+01,1.0562e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,32,23,22:38,27,25,20 chr1 144912234 . G . PASS END=144912270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:90:0,120,1800:0,229,255:40,0 chr1 144912271 . T . PASS END=144912294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,167,255:40,0 chr1 144915445 . T . PASS END=144915449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:102:0,120,1800:0,255,255:40,0 chr1 144915450 . T . PASS END=144915523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:137,0:137:99:103:0,120,1800:0,255,255:40,0 chr1 144915524 . C . PASS END=144915560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,0:138:99:127:0,120,1800:0,255,255:40,0 chr1 144915561 . G A, 50.00 PASS DP=127;MQ=186.87;MQRankSum=0.699;ReadPosRankSum=4.048;FractionInformativeReads=0.992;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:59,67,0:0.532,0.000:126:27,32,0:32,35,0:48:85,0,50,2280,2082,4361:255,0,255:40,0:5.0000e+01,6.6786e-05,5.2684e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,33,36,31:28,31,33,34 chr1 144915562 . C . PASS END=144915623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:80:0,120,1800:0,224,255:40,0 chr1 144915624 . G A, 49.60 PASS DP=79;MQ=132.80;MQRankSum=-3.262;ReadPosRankSum=4.303;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,41,0:0.532,0.000:77:16,18,0:20,23,0:48:84,0,50,1398,1255,2652:255,0,255:24,0:4.9600e+01,7.1187e-05,5.2672e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,22,12,29:18,18,21,20 chr1 144915625 . T . PASS END=144915639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,158,255:40,0 chr1 144916570 . C . PASS END=144916710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:155,0:155:99:82:0,120,1800:0,186,255:40,0 chr1 144916711 . C . PASS END=144916747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:96:0,120,1800:0,255,255:40,0 chr1 144916748 . C G, 48.74 PASS DP=95;MQ=250.00;MQRankSum=8.337;ReadPosRankSum=3.413;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,42,0:0.442,0.000:95:25,20,0:28,22,0:47:84,0,50,1443,1887,3330:255,0,255:34,0:4.8736e+01,7.9730e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,42,12,30:29,24,22,20 chr1 144916749 . T . PASS END=144916749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 144917499 . T . PASS END=144917508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,179,255:40,0 chr1 144917509 . G . PASS END=144917545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:65:0,120,1800:0,195,255:40,0 chr1 144917546 . A G, 49.94 PASS DP=115;MQ=249.17;MQRankSum=8.534;ReadPosRankSum=5.552;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:59,55,0:0.482,0.000:114:32,27,0:27,28,0:47:85,0,47,185,185,185:255,0,255:40,0:4.9943e+01,8.7495e-05,5.0000e+01,1.8471e+02,2.1948e+02,1.8772e+02:0.00,34.77,37.78,34.77,69.54,37.78:35,24,32,23:34,25,28,27 chr1 144917547 . G . PASS END=144917583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:115:0,120,1800:0,255,255:40,0 chr1 144917584 . C . PASS END=144917636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:93:0,120,1800:0,255,255:40,0 chr1 144917819 . C . PASS END=144917840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:115:0,120,1800:0,255,255:40,0 chr1 144917841 . T C, 49.61 PASS DP=126;MQ=85.41;MQRankSum=-0.166;ReadPosRankSum=6.165;FractionInformativeReads=0.992;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:66,59,0:0.472,0.000:125:32,26,0:34,33,0:45:84,0,44,184,184,184:255,0,255:40,0:4.9614e+01,1.2633e-04,4.7400e+01,1.8438e+02,2.1915e+02,1.8739e+02:0.00,34.77,37.78,34.77,69.54,37.78:36,30,37,22:34,32,28,31 chr1 144917842 . G . PASS END=144917878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:132,0:132:99:128:0,120,1800:0,255,255:40,0 chr1 144917879 . T . PASS END=144917932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,0:129:99:81:0,120,1800:0,213,255:40,0 chr1 144918833 . C . PASS END=144918919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,2:125:99:74:0,120,1800:0,182,255:40,0 chr1 144918920 . C . PASS END=144918956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:109:0,120,1800:0,255,255:40,0 chr1 144918957 . T A, 50.00 PASS DP=108;MQ=131.86;MQRankSum=-1.684;ReadPosRankSum=5.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,55,0:0.509,0.000:108:28,31,0:25,24,0:48:85,0,50,1884,1748,3632:255,0,255:40,0:5.0000e+01,6.5492e-05,5.2960e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,23,23,32:27,26,27,28 chr1 144918958 . C . PASS END=144918991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:85:0,120,1800:0,233,255:40,0 chr1 144921835 . C . PASS END=144922047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:73:0,120,1800:0,201,255:40,2 chr1 144922187 . G . PASS END=144922208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:108:0,120,1800:0,255,255:40,0 chr1 144922209 . T . PASS END=144922279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,2:116:99:93:0,120,1800:0,255,255:40,0 chr1 144922519 . C . PASS END=144922545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:136,0:136:99:131:0,120,1800:0,255,255:40,0 chr1 144922546 . C . PASS END=144922582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:159,0:159:99:145:0,120,1800:0,255,255:40,0 chr1 144922583 . G A, 46.14 PASS DP=157;MQ=250.00;MQRankSum=10.573;ReadPosRankSum=6.950;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:95,62,0:0.395,0.000:157:55,31,0:40,31,0:45:81,0,50,2181,3335,5516:255,0,255:40,0:4.6138e+01,1.2736e-04,5.3000e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:51,44,25,37:45,50,32,30 chr1 144922584 . A . PASS END=144922620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:136,0:136:99:100:0,120,1800:0,255,255:40,0 chr1 144922621 . A . PASS END=144922638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:93:0,120,1800:0,241,255:40,0 chr1 144923690 . C . PASS END=144923776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:149,1:150:99:122:0,120,1800:0,255,255:40,0 chr1 144923777 . A . PASS END=144923821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:86:0,105,1575:0,255,255:40,0 chr1 144930584 . C . PASS END=144930595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,186,255:40,0 chr1 144930596 . C A, 46.11 PASS DP=65;MQ=250.00;MQRankSum=6.782;ReadPosRankSum=1.681;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,26,0:0.400,0.000:65:21,16,0:18,10,0:45:81,0,50,819,1371,2190:255,0,255:38,0:4.6108e+01,1.2814e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,18,16,10:19,20,12,14 chr1 144930597 . G . PASS END=144930633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,188,255:40,0 chr1 144930634 . G . PASS END=144930902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:74:0,120,1800:0,196,255:40,0 chr1 144930903 . C . PASS END=144930939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:95:0,120,1800:0,206,255:40,0 chr1 144930940 . T C, 50.00 PASS DP=94;MQ=250.00;MQRankSum=8.331;ReadPosRankSum=3.686;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,50,0:0.532,0.000:94:28,24,0:16,26,0:48:85,0,50,1657,1540,3197:255,0,255:37,0:5.0000e+01,6.6527e-05,5.2734e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,28,25,25:22,22,25,25 chr1 144930941 . C . PASS END=144930977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:89:0,120,1800:0,235,255:40,0 chr1 144930978 . G . PASS END=144931049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:73:0,120,1800:0,214,255:40,0 chr1 144931050 . T . PASS END=144931086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,191,255:40,0 chr1 144931087 . T C, 50.00 PASS DP=68;MQ=250.00;MQRankSum=7.083;ReadPosRankSum=3.735;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,34,0:0.500,0.000:68:20,13,0:14,21,0:48:85,0,50,1200,1179,2378:255,0,255:30,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,22,19,15:16,18,24,10 chr1 144931088 . G . PASS END=144931124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,154,255:40,0 chr1 144931125 . G . PASS END=144931292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:56:0,120,1800:0,135,255:40,0 chr1 144931293 . T . PASS END=144931329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:113:0,120,1800:0,255,255:40,0 chr1 144931330 . C T, 49.96 PASS DP=118;MQ=250.00;MQRankSum=9.364;ReadPosRankSum=5.601;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:60,58,0:0.492,0.000:118:24,33,0:36,25,0:48:85,0,50,1953,2113,4066:255,0,255:40,0:4.9964e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,38,32,26:26,34,27,31 chr1 144931331 . A . PASS END=144931391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:87:0,120,1800:0,245,255:40,0 chr1 144931392 . G A, 50.00 PASS DP=87;MQ=250.00;MQRankSum=8.023;ReadPosRankSum=0.412;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,45,0:0.517,0.000:87:17,24,0:25,21,0:48:85,0,50,1602,1472,3073:255,0,255:38,0:5.0000e+01,6.5751e-05,5.2887e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,22,24,21:15,27,25,20 chr1 144931393 . C . PASS END=144931460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:60:0,120,1800:0,134,255:40,0 chr1 144931461 . A T, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.754;ReadPosRankSum=4.951;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,32,0:0.516,0.000:62:11,16,0:19,16,0:48:85,0,50,1145,1006,2151:255,0,255:26,0:5.0000e+01,6.5751e-05,5.2872e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,15,10,22:14,16,14,18 chr1 144931462 . G . PASS END=144931498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,138,255:40,0 chr1 144931499 . C . PASS END=144931672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:90:36:0,90,1350:0,95,255:40,0 chr1 144931673 . C . PASS END=144931708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,61,255:25,0 chr1 144932106 . A . PASS END=144932107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 144932108 . G . PASS END=144932108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 144932109 . G . PASS END=144932118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 144932119 . T . PASS END=144932119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 144932120 . T . PASS END=144932122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 144932123 . A . PASS END=144932123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 144932124 . A . PASS END=144932126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 144932127 . T . PASS END=144932137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 144932138 . G . PASS END=144932141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 144932142 . C . PASS END=144932143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 144932144 . C . PASS END=144932148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 144932149 . G . PASS END=144932149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 144932150 . C . PASS END=144932153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 144932154 . C . PASS END=144932195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,513:0,44,255:19,0 chr1 144932196 . TTCCGGCTCTGC T, 44.83 PASS DP=21;MQ=250.00;MQRankSum=3.618;ReadPosRankSum=0.410;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,7,0:0.333,0.000:21:7,4,0:7,3,0:44:74,0,50,294,588,882:173,0,255:14,6:4.4834e+01,1.6438e-04,5.3000e+01,2.9970e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:8,6,4,3:9,5,1,6:144932196 chr1 144932197 . T . LowGQ END=144932207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,7:21:0:21:0,0,212:145,0,255:15,6 chr1 144932208 . G A, 44.83 PASS DP=21;MQ=250.00;MQRankSum=3.618;ReadPosRankSum=0.485;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,7,0:0.333,0.000:21:7,4,0:7,3,0:44:80,0,50,250,501,751:208,0,255:13,0:4.4834e+01,1.6438e-04,5.3000e+01,2.5036e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,4,3:9,5,1,6:144932196 chr1 144932209 . C . PASS END=144932219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 144932220 . G T, 47.81 PASS DP=25;MQ=249.38;MQRankSum=3.300;ReadPosRankSum=0.471;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,10,0:0.400,0.000:25:7,6,0:8,4,0:47:83,0,50,358,536,894:255,0,255:14,0:4.7814e+01,9.3708e-05,5.3000e+01,3.5762e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,5,5:4,11,3,7 chr1 144932221 . C . PASS END=144932231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:24,0 chr1 144932232 . C . PASS END=144932232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:19,0 chr1 144932233 . T . PASS END=144932249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,894:0,62,255:25,0 chr1 144932250 . G . PASS END=144932250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 144932251 . C . PASS END=144932255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 144932256 . C . PASS END=144932257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 144932258 . G . PASS END=144932259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 144932260 . C . PASS END=144932262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 144932263 . A . PASS END=144932286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,652:0,54,255:19,0 chr1 144932287 . C . PASS END=144932287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 144932288 . T . PASS END=144932288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 144932289 . A . PASS END=144932293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 144932294 . C . PASS END=144932299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 144932300 . C . PASS END=144932301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 144932302 . A . PASS END=144932302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 144932303 . C . PASS END=144932304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 144932305 . G . PASS END=144932318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 144932319 . T . PASS END=144932331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:18,0 chr1 144932332 . C . PASS END=144932337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 144932338 . A . PASS END=144932338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 144932339 . A . PASS END=144932341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 144932342 . T G, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=2.665;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,12,0:0.571,0.000:21:1,7,0:8,5,0:48:85,0,49,421,322,743:255,0,255:9,0:5.0000e+01,7.0410e-05,5.2065e+01,4.2105e+02,3.5639e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,5,7:7,2,8,4 chr1 144932343 . C . PASS END=144932351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 144932352 . G . PASS END=144932352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 144932353 . C . PASS END=144932387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr1 144932388 . G . PASS END=144932400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 144932416 . G . PASS END=144932420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 144932421 . C . PASS END=144932422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 144932423 . C . PASS END=144932423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 144932424 . T . PASS END=144932439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 144932440 . C . PASS END=144932457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:4:0,12,155:0,12,155:6,0 chr1 144932458 . C . PASS END=144932470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 144932471 . A . PASS END=144932481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:4:0,3,45:0,12,133:3,0 chr1 144934146 . G . PASS END=144934153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:93:0,120,1800:0,255,255:40,0 chr1 144946625 . C . PASS END=144946730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:87:0,120,1800:0,246,255:40,0 chr1 144946731 . T . PASS END=144946742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:80:0,120,1800:0,202,255:40,0 chr1 144952197 . C . PASS END=144952206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:111:0,120,1800:0,255,255:40,0 chr1 144952207 . C T, 0.01 DRAGENSnpHardQUAL DP=111;MQ=23.58;MQRankSum=1.463;ReadPosRankSum=4.944;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:97,13,0:0.118,0.000:110:52,8,0:45,5,0:26:9,0,34,457,3310,3767:162,0,255:40,0:1.1189e-02,2.5896e+01,6.3230e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:63,34,8,5:44,53,7,6 chr1 144952208 . T . PASS END=144952219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:108:0,120,1800:0,255,255:40,0 chr1 144952220 . C T, 26.75 PASS DP=109;MQ=23.20;MQRankSum=1.747;ReadPosRankSum=4.159;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:70,38,0:0.352,0.000:108:37,24,0:33,14,0:26:62,0,34,1334,2451,3785:255,0,255:40,0:2.6746e+01,9.9988e-03,3.7343e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:37,33,25,13:32,38,23,15 chr1 144952221 . C . PASS END=144952254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,2:107:99:101:0,120,1800:0,255,255:40,0 chr1 144952255 . G C, 0.02 DRAGENSnpHardQUAL DP=102;MQ=23.13;MQRankSum=1.546;ReadPosRankSum=4.122;FractionInformativeReads=0.990;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:88,13,0:0.129,0.000:101:49,9,0:39,4,0:23:12,0,34,457,3081,3538:209,0,255:40,0:2.1301e-02,2.3105e+01,6.0439e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:45,43,7,6:40,48,5,8 chr1 144952256 . G . PASS END=144952292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:85:0,120,1800:0,221,255:40,0 chr1 144952293 . C . PASS END=144952375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1170:0,86,255:40,0 chr1 144952376 . C . PASS END=144952376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 144952566 . C . PASS END=144952580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,272:0,24,255:8,0 chr1 144952581 . G . LowGQ END=144952581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 144952582 . A . PASS END=144952593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:9,0 chr1 144952594 . A . PASS END=144952594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 144952595 . A . PASS END=144952603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 144952604 . A . PASS END=144952604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 144952605 . A . PASS END=144952625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 144952626 . T . PASS END=144952626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 144952627 . C . PASS END=144952636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 144952637 . A . PASS END=144952638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 144952639 . T . PASS END=144952639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:5,0 chr1 144952640 . G . PASS END=144952640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 144952641 . G . LowGQ END=144952641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,149:18,0,167:5,0 chr1 144952642 . C . PASS END=144952649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 144952650 . C . PASS END=144952668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 144952669 . T . PASS END=144952674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,203:0,21,203:7,0 chr1 144952675 . T . PASS END=144952682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,219:5,0 chr1 144952683 . A . PASS END=144952686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:4:5:0,4,135:0,4,194:3,0 chr1 144952687 . G C, 10.43 PASS DP=5;MQ=12.29;MQRankSum=0.358;ReadPosRankSum=1.231;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,3,0:0.600,0.000:5:1,1,0:1,2,0:10:45,0,20,99,40,140:93,0,40:1,0:1.0426e+01,4.3513e-01,2.3302e+01,9.9733e+01,7.5426e+01,1.4295e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,1,0,3:0,2,2,1 chr1 144952688 . C . PASS END=144952689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr1 144955216 . C . PASS END=144955292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,186,255:40,0 chr1 144968885 . C . PASS END=144968900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:6,0 chr1 144968901 . C . PASS END=144968915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr1 144968916 . C . PASS END=144968961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,336:0,30,255:11,0 chr1 144968962 . C . LowGQ END=144968962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 144968963 . G . PASS END=144968973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 144968974 . G . PASS END=144968992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,333:0,27,255:9,0 chr1 144982706 . C . PASS END=144982847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:80:32:0,80,1185:0,80,255:40,0 chr1 144982848 . T . PASS END=144982848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 144982849 . T . PASS END=144982857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 144982858 . T . PASS END=144982858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 144982859 . C . PASS END=144982860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 144982861 . G . PASS END=144982875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 144982876 . A . PASS END=144982898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:18,0 chr1 144982899 . G . PASS END=144982900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 144982901 . T . LowGQ END=144982901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,515:21,0,255:12,0 chr1 144982902 . T . PASS END=144982909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:15:0,30,450:0,45,255:13,0 chr1 144982910 . T . PASS END=144982920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:10:0,24,360:0,30,255:9,0 chr1 144982921 . A . PASS END=144982935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:5:0,11,180:0,11,186:5,0 chr1 144983507 . A . PASS END=144983542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,2:117:99:113:0,120,1800:0,255,255:40,0 chr1 144994591 . C . PASS END=144994731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:61:0,120,1800:0,183,255:40,0 chr1 144994956 . C . PASS END=144994974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,280:0,27,255:9,0 chr1 144994975 . A . PASS END=144994990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 144994991 . A . PASS END=144994991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 144994992 . C . PASS END=144994994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 145000584 . C . PASS END=145000597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 145000598 . C . PASS END=145000607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 145000608 . G . PASS END=145000608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 145000609 . C . PASS END=145000636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 145000637 . G . PASS END=145000698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,328:0,30,255:13,0 chr1 145000699 . A . PASS END=145000699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 145000700 . C . PASS END=145000725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,415:0,39,255:13,0 chr1 145000726 . A . PASS END=145000726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 145000727 . C . PASS END=145000770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,344:0,33,255:12,0 chr1 145000771 . C . PASS END=145000771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 145000772 . C . PASS END=145000794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 145000795 . G . PASS END=145000795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 145000796 . A . PASS END=145000796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 145014068 . T . PASS END=145014095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,2:98:99:87:0,120,1800:0,207,255:40,0 chr1 145014096 . G A, 0.03 DRAGENSnpHardQUAL DP=112;MQ=65.02;MQRankSum=-2.568;ReadPosRankSum=-0.414;FractionInformativeReads=0.946;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:94,12,0:0.113,0.000:106:49,7,0:45,5,0:22:13,0,50,392,3256,3648:97,0,255:40,0:2.9439e-02,2.1703e+01,7.4703e+01,4.1401e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:65,29,12,0:46,48,7,5:145014096 chr1 145014097 . C . PASS END=145014102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,5:113:99:108:0,120,1800:0,221,255:40,0 chr1 145014103 . G C, 0.10 DRAGENSnpHardQUAL DP=121;MQ=68.85;MQRankSum=-3.093;ReadPosRankSum=-0.637;FractionInformativeReads=0.942;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:99,15,0:0.132,0.000:114:51,7,0:48,8,0:17:18,0,50,471,3465,3936:69,0,255:40,0:9.7634e-02,1.6531e+01,6.9531e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:64,35,14,1:48,51,8,7:145014096 chr1 145014104 . G . PASS END=145014125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,5:139:99:116:0,120,1800:0,204,255:40,0 chr1 145014126 . A . PASS END=145014126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:130,21:151:10:151:0,10,4202:0,10,255:40,0 chr1 145014127 . G . PASS END=145014156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:169,9:178:98:163:0,98,1800:0,98,255:40,0 chr1 145014157 . C . PASS END=145014157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:154,24:178:62:178:0,62,4826:0,62,255:40,0 chr1 145014158 . T . PASS END=145014185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:169,20:189:99:176:0,115,1800:0,115,255:40,7 chr1 145014186 . G . LowGQ END=145014187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:144,54:198:0:188:0,0,1745:255,0,255:40,72 chr1 145014188 . A . PASS END=145014188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:174,14:188:64:188:0,64,5890:0,64,255:40,3 chr1 145014189 . A . PASS END=145014197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:185,1:186:99:184:0,120,1800:0,255,255:40,3 chr1 145014198 . A . LowGQ END=145014199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,50:188:0:186:0,0,2648:255,0,255:40,17 chr1 145014200 . A . PASS END=145014262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:196,4:200:99:176:0,120,1800:0,158,255:40,2 chr1 145014263 . C T, 0.18 DRAGENSnpHardQUAL DP=175;MQ=84.79;MQRankSum=-4.313;ReadPosRankSum=-1.151;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:155,18,0:0.104,0.000:173:77,8,0:78,10,0:14:21,0,48,590,5274,5871:226,0,255:40,0:1.7981e-01,1.3919e+01,6.4619e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:64,91,9,9:86,69,7,11 chr1 145014264 . G . PASS END=145014300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:148,0:148:99:136:0,120,1800:0,255,255:40,0 chr1 145014301 . A . PASS END=145014313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,1:132:99:126:0,120,1800:0,255,255:40,0 chr1 145015839 . T . PASS END=145015839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:159,0:159:99:159:0,120,1800:0,255,255:40,0 chr1 145015840 . T . PASS END=145015876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:175,1:176:99:159:0,120,1800:0,255,255:40,0 chr1 145015877 . G T, 7.90 DRAGENSnpHardQUAL DP=177;MQ=250.00;MQRankSum=8.503;ReadPosRankSum=7.980;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:148,29,0:0.164,0.000:177:74,17,0:74,12,0:8:42,0,50,1008,5208,6217:255,0,255:40,0:7.9044e+00,7.6767e-01,5.3768e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:77,71,15,14:79,69,13,16 chr1 145015878 . A . PASS END=145015914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:186,0:186:99:176:0,120,1800:0,255,255:40,0 chr1 145015915 . C . PASS END=145015982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:175,0:175:99:120:0,120,1800:0,255,255:40,0 chr1 145015983 . G . PASS END=145016011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:93:0,120,1800:0,253,255:40,0 chr1 145021112 . C . PASS END=145021126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:296,0:296:99:287:0,120,1800:0,255,255:40,0 chr1 145021127 . T . PASS END=145021167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:294,0:294:99:269:0,120,1800:0,255,255:40,0 chr1 145038917 . C . PASS END=145038939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:151,1:152:99:149:0,120,1800:0,191,255:40,1 chr1 145039590 . C . PASS END=145039609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:209,0:209:99:188:0,120,1800:0,255,255:40,0 chr1 145075630 . C . PASS END=145075645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:175,0:175:99:150:0,120,1800:0,255,255:40,0 chr1 145075646 . C . PASS END=145075682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:195,1:196:99:179:0,120,1800:0,255,255:40,0 chr1 145075683 . C T, 26.58 PASS DP=209;MQ=249.60;MQRankSum=9.884;ReadPosRankSum=6.737;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:157,51,0:0.245,0.000:208:87,21,0:70,30,0:27:61,0,50,1805,5597,7402:255,0,255:40,0:2.6578e+01,9.5814e-03,5.3010e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:92,65,27,24:82,75,25,26 chr1 145075684 . C . PASS END=145075720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:195,0:195:99:189:0,120,1800:0,255,255:40,0 chr1 145075721 . T . PASS END=145075737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:190,0:190:99:184:0,120,1800:0,255,255:40,0 chr1 145075738 . G . PASS END=145075774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:173,0:173:99:165:0,120,1800:0,255,255:40,0 chr1 145075775 . G A, 0.37 DRAGENSnpHardQUAL DP=185;MQ=249.47;MQRankSum=7.293;ReadPosRankSum=1.669;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:165,20,0:0.108,0.000:185:89,12,0:76,8,0:11:24,0,50,682,5762,6444:170,0,255:40,0:3.7047e-01,1.0874e+01,6.3874e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:77,88,10,10:81,84,12,8 chr1 145075776 . C . PASS END=145075853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:142,0:142:99:133:0,120,1800:0,255,255:40,0 chr1 145075854 . G C, 43.52 PASS DP=132;MQ=249.82;MQRankSum=9.137;ReadPosRankSum=1.133;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:84,48,0:0.364,0.000:132:46,23,0:38,25,0:43:78,0,50,1683,2918,4601:255,0,255:40,0:4.3525e+01,2.1460e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:40,44,24,24:36,48,25,23 chr1 145075855 . C . PASS END=145075862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,3:128:99:127:0,120,1800:0,255,255:40,0 chr1 145096547 . A . PASS END=145096547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145096548 . T . PASS END=145096548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 145096549 . G . PASS END=145096572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 145096573 . A . PASS END=145096574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 145096575 . T . PASS END=145096579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 145096580 . G . PASS END=145096580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 145096581 . A . PASS END=145096581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145096582 . C . PASS END=145096583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 145096584 . G . PASS END=145096585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 145096586 . C . PASS END=145096586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 145096587 . T . PASS END=145096590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 145096591 . G . PASS END=145096591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:25,0 chr1 145096592 . C . PASS END=145096595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 145096596 . C . PASS END=145096601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145096602 . C . PASS END=145096618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:25:0,67,986:0,67,255:25,0 chr1 145096619 . C . PASS END=145096619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 145096620 . A . PASS END=145096621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 145103908 . T . PASS END=145103927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:178,2:180:99:148:0,120,1800:0,255,255:40,0 chr1 145103948 . A . PASS END=145103984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:252,0:252:99:240:0,120,1800:0,255,255:40,0 chr1 145103985 . A . PASS END=145104006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:268,0:268:99:259:0,120,1800:0,255,255:40,0 chr1 145104007 . A . PASS END=145104017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:244,1:245:99:243:0,120,1800:0,255,255:40,0 chr1 145109524 . C . PASS END=145109548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:256,1:257:99:191:0,120,1800:0,255,255:40,0 chr1 145109549 . G T, 24.07 PASS DP=286;MQ=249.92;MQRankSum=12.384;ReadPosRankSum=0.905;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:219,67,0:0.234,0.000:286:114,30,0:105,37,0:24:59,0,50,2286,7661,9947:255,0,255:40,0:2.4068e+01,1.7078e-02,5.3017e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:135,84,48,19:110,109,39,28 chr1 145109550 . A . PASS END=145109582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:303,1:304:99:288:0,120,1800:0,255,255:40,0 chr1 145109583 . C A, 49.44 PASS DP=324;MQ=249.77;MQRankSum=15.100;ReadPosRankSum=1.523;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:175,149,0:0.460,0.000:324:100,64,0:75,85,0:48:84,0,50,5245,6146,11391:255,0,255:40,0:4.9444e+01,7.1187e-05,5.3000e+01,4.4853e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:109,66,89,60:98,77,70,79 chr1 145109584 . G . PASS END=145109660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:318,0:318:99:234:0,120,1800:0,255,255:40,0 chr1 145109661 . G A, 11.39 PASS DP=228;MQ=250.00;MQRankSum=9.919;ReadPosRankSum=2.314;FractionInformativeReads=0.996;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:187,40,0:0.176,0.000:227:103,9,0:84,31,0:11:46,0,50,1406,6539,7946:255,0,255:40,0:1.1389e+01,3.2749e-01,5.3327e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:73,114,19,21:87,100,16,24 chr1 145109662 . A . PASS END=145109684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:175,2:177:99:150:0,120,1800:0,255,255:40,0 chr1 145112373 . A . PASS END=145112373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:162,0:162:99:162:0,120,1800:0,255,255:40,0 chr1 145112374 . T . PASS END=145112413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:173,0:173:99:161:0,120,1800:0,255,255:40,0 chr1 145112414 . T C, 32.26 PASS DP=232;MQ=249.88;MQRankSum=10.787;ReadPosRankSum=4.414;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:177,55,0:0.237,0.000:232:83,24,0:94,31,0:32:67,0,47,167,167,167:255,0,255:40,0:3.2263e+01,2.6236e-03,5.0003e+01,1.6703e+02,2.0180e+02,1.7004e+02:0.00,34.77,37.78,34.77,69.54,37.78:101,76,37,18:91,86,22,33:145112414 chr1 145112415 . G . PASS END=145112419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:231,1:232:99:231:0,120,1800:0,255,255:40,0 chr1 145112420 . C . LowGQ END=145112420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:178,53:231:0:231:0,0,4768:255,0,255:40,0 chr1 145112421 . G . PASS END=145112427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:233,0:233:99:232:0,120,1800:0,255,255:40,0 chr1 145112428 . C T, 32.26 PASS DP=257;MQ=249.75;MQRankSum=11.261;ReadPosRankSum=3.649;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:198,59,0:0.230,0.000:257:99,23,0:99,36,0:32:67,0,47,167,167,167:255,0,255:40,0:3.2263e+01,2.6236e-03,5.0003e+01,1.6703e+02,2.0180e+02,1.7004e+02:0.00,34.77,37.78,34.77,69.54,37.78:112,86,39,20:109,89,23,36:145112414 chr1 145112429 . C . PASS END=145112484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:262,0:262:99:233:0,120,1800:0,255,255:40,0 chr1 145112485 . C T, 19.13 PASS DP=227;MQ=249.98;MQRankSum=10.631;ReadPosRankSum=6.342;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:179,48,0:0.211,0.000:227:83,19,0:96,29,0:19:54,0,50,1672,6341,8012:255,0,255:40,0:1.9131e+01,5.3395e-02,5.3053e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:78,101,17,31:98,81,20,28 chr1 145112486 . G . PASS END=145112519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:204,0:204:99:184:0,120,1800:0,255,255:40,1 chr1 145115735 . C . PASS END=145115770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:255,0:255:99:223:0,120,1800:0,255,255:40,0 chr1 145115771 . C . PASS END=145115809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:325,0:325:99:299:0,120,1800:0,255,255:40,0 chr1 145115810 . A G, 49.78 PASS DP=344;MQ=249.72;MQRankSum=15.772;ReadPosRankSum=8.282;FractionInformativeReads=0.994;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:180,162,0:0.474,0.000:342:87,76,0:93,86,0:48:85,0,50,5689,6306,11995:255,0,255:40,0:4.9776e+01,6.7563e-05,5.3000e+01,4.4853e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:85,95,76,86:90,90,88,74 chr1 145115811 . T . PASS END=145115819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:343,1:344:99:327:0,120,1800:0,255,255:40,0 chr1 145115820 . T C, 20.86 PASS DP=323;MQ=249.85;MQRankSum=12.794;ReadPosRankSum=5.810;FractionInformativeReads=0.994;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:251,70,0:0.218,0.000:321:124,32,0:127,38,0:21:56,0,50,2438,8719,11157:255,0,255:40,0:2.0862e+01,3.5783e-02,5.3036e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:122,129,28,42:127,124,36,34 chr1 145115821 . G . PASS END=145115882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:291,3:294:99:226:0,120,1800:0,255,255:40,1 chr1 145115883 . G T, 1.16 DRAGENSnpHardQUAL DP=218;MQ=249.77;MQRankSum=8.265;ReadPosRankSum=3.258;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:191,26,0:0.120,0.000:217:92,13,0:99,13,0:6:30,0,50,916,6530,7446:255,0,255:40,0:1.1645e+00,6.2857e+00,5.9286e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:71,120,10,16:108,83,13,13 chr1 145115884 . C . PASS END=145115889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:217,0:217:99:215:0,120,1800:0,255,255:40,0 chr1 145176486 . A . PASS END=145176644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:72:0,120,1800:0,200,255:40,0 chr1 145205355 . A . PASS END=145205379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:280,0:280:99:275:0,120,1800:0,255,255:40,0 chr1 145209309 . A . PASS END=145209322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,173,255:40,0 chr1 145209323 . A . PASS END=145209324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,6:87:53:83:0,53,2680:0,53,255:40,6 chr1 145209325 . G . PASS END=145209325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,7:87:36:87:0,36,2733:0,36,255:40,6 chr1 145209326 . C . PASS END=145209326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,8:87:20:87:0,20,2745:0,20,255:40,6 chr1 145209327 . G . PASS END=145209329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:84:0,101,1800:0,101,255:40,0 chr1 145209330 . G C, 16.01 PASS DP=84;MQ=67.58;MQRankSum=2.229;ReadPosRankSum=3.189;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:66,18,0:0.214,0.000:84:36,8,0:30,10,0:16:51,0,46,643,2174,2817:255,0,255:40,0:1.6014e+01,1.1019e-01,4.8610e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:43,23,8,10:29,37,10,8 chr1 145209331 . G . PASS END=145209367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:84:0,106,1800:0,106,255:40,0 chr1 145209368 . C . PASS END=145209376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:110:0,120,1800:0,255,255:40,0 chr1 145209377 . G . PASS END=145209377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,8:116:54:116:0,54,3683:0,54,255:40,11 chr1 145209380 . C . PASS END=145209436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:135,1:136:97:115:0,97,1800:0,97,255:40,0 chr1 145212356 . A . PASS END=145212439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:318,0:318:99:231:0,120,1800:0,255,255:40,1 chr1 145248813 . C . PASS END=145248848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:44:0,105,1659:0,105,255:40,0 chr1 145248849 . A . PASS END=145248894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:33:0,87,1305:0,99,255:40,0 chr1 145273185 . A . PASS END=145273264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:54:0,120,1800:0,162,255:40,0 chr1 145273265 . G . PASS END=145273301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:190,0:190:99:146:0,120,1800:0,255,255:40,0 chr1 145273302 . A G, 0.86 DRAGENSnpHardQUAL DP=213;MQ=49.71;MQRankSum=1.021;ReadPosRankSum=5.019;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:183,30,0:0.141,0.000:213:85,14,0:98,16,0:7:28,0,43,1053,6517,7570:255,0,255:40,0:8.6477e-01,7.4342e+00,5.3434e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:112,71,15,15:94,89,17,13 chr1 145273303 . T . PASS END=145273344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:256,1:257:99:214:0,120,1800:0,255,255:40,0 chr1 145273345 . T C, 0.39 DRAGENSnpHardQUAL DP=271;MQ=53.63;MQRankSum=0.680;ReadPosRankSum=6.262;FractionInformativeReads=0.996;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:235,35,0:0.130,0.000:270:108,17,0:127,18,0:11:24,0,44,1223,8032,9255:255,0,255:40,0:3.8819e-01,1.0680e+01,5.7430e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:140,95,19,16:115,120,25,10 chr1 145273346 . C . PASS END=145273385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:274,0:274:99:265:0,120,1800:0,255,255:40,0 chr1 145273386 . C . PASS END=145273390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:278,1:279:99:276:0,120,1800:0,255,255:40,0 chr1 145273391 . G . PASS END=145273430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:256,1:257:99:197:0,120,1800:0,255,255:40,0 chr1 145273431 . A G, 2.04 DRAGENSnpHardQUAL DP=194;MQ=52.21;MQRankSum=-0.918;ReadPosRankSum=4.389;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:162,31,0:0.161,0.000:193:81,11,0:81,20,0:4:33,0,44,1072,5590,6662:255,0,255:40,0:2.0403e+00,4.2613e+00,5.1011e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:44,118,13,18:81,81,23,8 chr1 145273432 . G . PASS END=145273444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:181,0:181:99:181:0,120,1800:0,255,255:40,0 chr1 145281369 . G . PASS END=145281370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,0:129:99:129:0,120,1800:0,255,255:40,0 chr1 145281371 . A . PASS END=145281407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:151,1:152:99:129:0,120,1800:0,255,255:40,0 chr1 145281408 . C T, 0.03 DRAGENSnpHardQUAL DP=181;MQ=41.30;MQRankSum=0.849;ReadPosRankSum=2.340;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:162,19,0:0.105,0.000:181:76,8,0:86,11,0:22:13,0,40,676,5704,6380:181,0,255:40,0:3.0330e-02,2.1574e+01,6.4699e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:87,75,14,5:77,85,9,10 chr1 145281409 . C . PASS END=145281445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:202,0:202:99:179:0,120,1800:0,255,255:40,0 chr1 145281446 . C . PASS END=145281505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:202,0:202:99:186:0,120,1800:0,255,255:40,0 chr1 145281506 . G . PASS END=145281542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:184,0:184:99:167:0,120,1800:0,255,255:40,0 chr1 145281543 . C T, 25.61 PASS DP=167;MQ=47.11;MQRankSum=2.025;ReadPosRankSum=7.703;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:117,50,0:0.299,0.000:167:50,25,0:67,25,0:26:60,0,43,1696,4106,5802:255,0,255:40,0:2.5613e+01,1.2050e-02,4.6012e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:58,59,22,28:57,60,29,21 chr1 145281544 . C . PASS END=145281612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:163,1:164:99:145:0,120,1800:0,255,255:40,0 chr1 145281613 . C A, 0.33 DRAGENSnpHardQUAL DP=145;MQ=50.46;MQRankSum=0.192;ReadPosRankSum=0.496;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:125,20,0:0.138,0.000:145:62,9,0:63,11,0:11:24,0,43,684,4271,4956:255,0,255:40,0:3.3055e-01,1.1350e+01,5.7600e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:56,69,10,10:57,68,9,11:145281613 chr1 145281614 . C . PASS END=145281632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:144,0:144:99:137:0,120,1800:0,255,255:40,0 chr1 145281633 . C A, 0.06 DRAGENSnpHardQUAL DP=141;MQ=52.00;MQRankSum=-0.166;ReadPosRankSum=1.232;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:125,16,0:0.113,0.000:141:61,8,0:64,8,0:19:16,0,44,555,4298,4853:158,0,255:40,0:5.6205e-02,1.8908e+01,6.5658e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:62,63,6,10:76,49,10,6:145281613 chr1 145281634 . C . PASS END=145281670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:103:0,120,1800:0,255,255:40,0 chr1 145281671 . G . PASS END=145281704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:95:0,120,1800:0,252,255:40,0 chr1 145281955 . A . PASS END=145282031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:257,5:262:99:227:0,120,1800:0,255,255:40,1 chr1 145290429 . C . PASS END=145290435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:108:0,120,1800:0,255,255:40,0 chr1 145290436 . G . PASS END=145290487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,1:119:99:110:0,120,1800:0,255,255:40,0 chr1 145293114 . A . PASS END=145293196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:79:0,120,1800:0,122,255:40,0 chr1 145293406 . A . PASS END=145293424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:201,0:201:99:181:0,120,1800:0,255,255:40,0 chr1 145293425 . C . PASS END=145293425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:201,16:217:78:217:0,78,6876:0,78,255:40,0 chr1 145293426 . T . PASS END=145293450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:233,2:235:99:217:0,120,1800:0,255,255:40,0 chr1 145293451 . A . PASS END=145293489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:269,0:269:99:257:0,120,1800:0,255,255:40,0 chr1 145293490 . G C, 0.01 DRAGENSnpHardQUAL DP=285;MQ=90.50;MQRankSum=-5.599;ReadPosRankSum=2.682;FractionInformativeReads=0.996;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:260,24,0:0.085,0.000:284:109,11,0:151,13,0:25:9,0,47,858,9007,9865:60,0,255:40,0:1.2515e-02,2.5410e+01,7.5210e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:138,122,10,14:131,129,11,13:145293490 chr1 145293491 . C . PASS END=145293497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:285,0:285:99:283:0,120,1800:0,255,255:40,0 chr1 145293498 . G C, 0.01 DRAGENSnpHardQUAL DP=283;MQ=90.24;MQRankSum=-5.427;ReadPosRankSum=3.719;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:259,24,0:0.085,0.000:283:109,11,0:150,13,0:25:9,0,47,858,9035,9894:41,0,255:40,0:1.2708e-02,2.5343e+01,7.5143e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:130,129,10,14:122,137,17,7:145293490 chr1 145293499 . A . PASS END=145293509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:280,2:282:99:277:0,120,1800:0,255,255:40,0 chr1 145293510 . C . LowGQ END=145293510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:254,26:280:0:280:0,0,8710:144,0,255:40,0 chr1 145293511 . A . PASS END=145293514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:276,1:277:99:274:0,120,1800:0,255,255:40,0 chr1 145293515 . A G, 44.82 PASS DP=273;MQ=88.01;MQRankSum=3.192;ReadPosRankSum=2.722;FractionInformativeReads=0.996;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:166,106,0:0.390,0.000:272:67,48,0:99,58,0:43:80,0,44,180,180,180:255,0,255:40,0:4.4824e+01,2.3583e-04,4.6700e+01,1.7959e+02,2.1436e+02,1.8260e+02:0.00,34.77,37.78,34.77,69.54,37.78:64,102,52,54:91,75,56,50 chr1 145293516 . C . PASS END=145293565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:240,0:240:99:211:0,120,1800:0,255,255:40,0 chr1 145293566 . G A, 9.37 DRAGENSnpHardQUAL DP=211;MQ=80.45;MQRankSum=-2.117;ReadPosRankSum=5.446;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:171,39,0:0.186,0.000:210:69,16,0:102,23,0:9:44,0,47,1366,6068,7434:255,0,255:40,0:9.3706e+00,5.3353e-01,5.0284e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:50,121,12,27:102,69,19,20 chr1 145293567 . A . PASS END=145293580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:208,0:208:99:188:0,120,1800:0,255,255:40,0 chr1 145295423 . A . PASS END=145295501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:97:45:0,97,1661:0,97,255:40,0 chr1 145295502 . G . PASS END=145295525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,130,255:40,0 chr1 145296357 . G . PASS END=145296371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:52:0,120,1800:0,129,255:40,0 chr1 145296372 . A G, 41.00 PASS DP=58;MQ=52.26;MQRankSum=-5.129;ReadPosRankSum=3.313;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,38,0:0.655,0.000:58:10,22,0:10,16,0:37:76,0,36,176,176,176:255,0,255:19,0:4.1001e+01,8.5872e-04,3.9271e+01,1.7577e+02,2.1054e+02,1.7878e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,5,20,18:11,9,16,22 chr1 145296373 . G . LowGQ END=145296373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:0:58:0,0,1784:19,0,255:40,0 chr1 145296374 . T . PASS END=145296402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,141,255:40,0 chr1 145296403 . C . PASS END=145296403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,7:76:24:76:0,24,2388:0,24,255:40,0 chr1 145296404 . T . PASS END=145296438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:76:0,120,1800:0,168,255:40,0 chr1 145296439 . C T, 8.23 DRAGENSnpHardQUAL DP=89;MQ=51.05;MQRankSum=-0.705;ReadPosRankSum=0.705;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:72,17,0:0.191,0.000:89:40,7,0:32,10,0:8:42,0,44,608,2465,3073:255,0,255:40,0:8.2319e+00,7.0716e-01,4.7832e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:34,38,11,6:42,30,7,10 chr1 145296440 . G . PASS END=145296447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:88:0,120,1800:0,255,255:40,0 chr1 145296448 . T . LowGQ END=145296448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,9:97:0:97:0,0,2958:57,0,255:40,0 chr1 145296449 . A . PASS END=145296477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:92:0,120,1800:0,255,255:40,0 chr1 145296478 . G T, 43.75 PASS DP=94;MQ=48.61;MQRankSum=-0.575;ReadPosRankSum=5.253;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,45,0:0.479,0.000:94:24,24,0:25,21,0:42:79,0,44,1568,1658,3226:255,0,255:40,0:4.3748e+01,2.6741e-04,4.7125e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,24,24,21:28,21,21,24 chr1 145296479 . A . PASS END=145296515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:85:0,120,1800:0,184,255:40,0 chr1 145296516 . A . PASS END=145296571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:70:0,120,1800:0,161,255:40,0 chr1 145297619 . A . PASS END=145297691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:108:0,108,1800:0,108,255:40,0 chr1 145298155 . G . PASS END=145298185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:89:0,120,1800:0,208,255:40,0 chr1 145298186 . C G, 16.25 PASS DP=110;MQ=21.72;MQRankSum=2.440;ReadPosRankSum=4.064;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:80,30,0:0.273,0.000:110:46,18,0:34,12,0:16:51,0,41,1065,2780,3845:255,0,255:40,0:1.6252e+01,1.0436e-01,4.4104e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:58,22,21,9:46,34,17,13 chr1 145298187 . C . PASS END=145298223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:110:0,120,1800:0,255,255:40,0 chr1 145298224 . A . PASS END=145298362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:60:0,120,1800:0,167,255:40,0 chr1 145298363 . C . PASS END=145298363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:67:61:0,67,2033:0,67,255:40,0 chr1 145298364 . C . PASS END=145298366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,174,255:40,0 chr1 145299730 . T . PASS END=145299939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:49:0,120,1800:0,129,255:40,0 chr1 145301720 . A . PASS END=145301734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:101:0,120,1800:0,255,255:40,0 chr1 145301735 . A . PASS END=145301753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:111:0,120,1800:0,255,255:40,0 chr1 145301754 . G . PASS END=145301792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:108:0,120,1800:0,255,255:40,0 chr1 145301793 . A G, 28.93 PASS DP=107;MQ=41.99;MQRankSum=-1.949;ReadPosRankSum=6.663;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:72,35,0:0.327,0.000:107:39,17,0:33,18,0:29:64,0,43,1252,2556,3807:255,0,255:40,0:2.8934e+01,5.6673e-03,4.5881e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,44,16,19:33,39,20,15:145301793 chr1 145301794 . G . PASS END=145301801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:102:0,120,1800:0,255,255:40,0 chr1 145301802 . C G, 31.27 PASS DP=101;MQ=41.43;MQRankSum=-1.709;ReadPosRankSum=2.466;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:66,35,0:0.347,0.000:101:36,17,0:30,18,0:31:66,0,43,1228,2303,3531:255,0,255:40,0:3.1266e+01,3.3582e-03,4.5878e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,43,14,21:33,33,20,15:145301793 chr1 145301803 . A . PASS END=145301822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:84:0,120,1800:0,236,255:40,0 chr1 145303910 . A . PASS END=145303970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,191,255:40,0 chr1 145303971 . A G, 0.03 DRAGENSnpHardQUAL DP=69;MQ=55.95;MQRankSum=-5.471;ReadPosRankSum=0.944;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:56,13,0:0.188,0.000:69:29,8,0:27,5,0:22:13,0,44,465,1966,2431:255,0,255:40,0:2.6403e-02,2.2175e+01,6.8675e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,30,5,8:23,33,8,5 chr1 145303972 . T . PASS END=145303982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,191,255:40,0 chr1 145305945 . A . PASS END=145305952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,945:0,65,255:25,0 chr1 145305953 . A . PASS END=145305953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 145305954 . G . PASS END=145305956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 145305957 . A . PASS END=145305957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:21,0 chr1 145305958 . T . PASS END=145305958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 145305959 . G . PASS END=145305959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 145305960 . A . PASS END=145305961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 145305962 . G . PASS END=145305962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 145305963 . A . PASS END=145305964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,754:0,33,255:23,1 chr1 145305965 . G . PASS END=145305965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,759:0,17,255:23,0 chr1 145305966 . A . PASS END=145305968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 145305969 . A . PASS END=145305969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 145305970 . G . PASS END=145305970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 145305971 . G . PASS END=145305971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,737:0,17,255:22,0 chr1 145305972 . A . PASS END=145305974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 145305975 . A . PASS END=145305978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,55,255:21,0 chr1 145305979 . A . PASS END=145305979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,711:0,33,255:15,0 chr1 145305980 . G . PASS END=145305981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:16,0 chr1 145305982 . G . PASS END=145305985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:30:22:0,30,450:0,66,255:10,0 chr1 145305986 . G . PASS END=145305996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:21:14:0,21,315:0,34,255:9,0 chr1 145311103 . G . PASS END=145311109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:241,3:244:99:240:0,120,1800:0,255,255:40,0 chr1 145311110 . G C, 1.42 DRAGENSnpHardQUAL DP=247;MQ=49.82;MQRankSum=-8.144;ReadPosRankSum=8.623;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:200,47,0:0.190,0.000:247:98,21,0:102,26,0:6:31,0,47,1652,7028,8680:255,0,255:40,0:1.4156e+00,5.5572e+00,5.5107e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:110,90,23,24:108,92,27,20 chr1 145311111 . T . PASS END=145311147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:236,0:236:99:229:0,120,1800:0,255,255:40,2 chr1 145311148 . G . PASS END=145311154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:224,1:225:99:223:0,120,1800:0,255,255:40,0 chr1 145311786 . G . PASS END=145311786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 145311787 . C . PASS END=145311790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:23,0 chr1 145311791 . G . PASS END=145311806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 145311807 . T . PASS END=145311807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 145311808 . G . PASS END=145311809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,978:0,78,255:26,0 chr1 145311810 . G . PASS END=145311810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145311811 . A . PASS END=145311820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,931:0,67,255:26,0 chr1 145311821 . A . PASS END=145311821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 145311822 . A . PASS END=145311822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 145311823 . G . PASS END=145311827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1150:0,80,255:32,0 chr1 145311828 . C G, 134.43 PASS DP=32;MQ=42.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,16,0:0,16,0:93:172,96,0,1234,96,1241:255,99,0:0,0:1.3443e+02,9.3307e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,14:0,0,18,14 chr1 145311829 . C . PASS END=145311838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:36,0 chr1 145311839 . A . PASS END=145311839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:32,0 chr1 145311840 . G . PASS END=145311865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1427:0,90,255:40,0 chr1 145311866 . G . PASS END=145311958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:41:0,93,1325:0,112,255:40,0 chr1 145312678 . A . PASS END=145312725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:38:0,84,1260:0,98,255:40,0 chr1 145312726 . C . PASS END=145312727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:36:0,75,1125:0,108,255:25,0 chr1 145312728 . A . PASS END=145312729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 145313334 . G . LowDepth;LowGQ END=145313367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr1 145313368 . G . LowDepth;LowGQ END=145313404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 145313405 . C T, 5.45 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=2.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4457e+00,4.4760e+00,4.4663e+00,4.0216e+01,3.9246e+01,4.3216e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,0,1 chr1 145313406 . T . LowDepth END=145313442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 145313443 . C . LowDepth END=145313506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 145314904 . G . LowDepth;LowGQ END=145315076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145315791 . A . LowDepth;LowGQ END=145315899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 145316512 . G . PASS END=145316546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 145316547 . A . LowGQ END=145316617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,16:3,0 chr1 145316618 . C . LowDepth;LowGQ END=145316684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145317406 . A . PASS END=145317434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,78:0,9,78:3,0 chr1 145317435 . G . PASS END=145317439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 145317440 . A . LowGQ END=145317440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 145317441 . G . PASS END=145317457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 145318936 . G . LowDepth;LowGQ END=145318987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145319662 . T . LowDepth;LowGQ END=145319665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,39:0,0 chr1 145319666 . G T, 5.46 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4578e+00,4.4712e+00,4.4615e+00,4.0228e+01,3.9241e+01,4.3228e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,0,1 chr1 145319667 . C . LowDepth;LowGQ END=145319703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145319704 . G . LowDepth;LowGQ END=145319767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 145319768 . A . LowDepth END=145319796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 145320511 . A . LowDepth;LowGQ END=145320619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145321230 . G . LowDepth;LowGQ END=145321402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145322124 . A . PASS END=145322161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 145322162 . C . PASS END=145322175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 145323654 . G . PASS END=145323655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:280,1:281:99:279:0,120,1800:0,255,255:40,0 chr1 145323656 . A T, 10.59 PASS DP=281;MQ=39.80;MQRankSum=-0.008;ReadPosRankSum=10.396;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:221,60,0:0.214,0.000:281:118,32,0:103,28,0:11:45,0,43,2096,7774,9870:255,0,255:40,0:1.0590e+01,3.9686e-01,4.5897e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:111,110,30,30:114,107,24,36 chr1 145323657 . T . PASS END=145323693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:284,0:284:99:277:0,120,1800:0,255,255:40,0 chr1 145323694 . A . PASS END=145323705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:270,1:271:99:264:0,120,1800:0,255,255:40,0 chr1 145324348 . G . LowDepth;LowGQ END=145324520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145325235 . A . PASS END=145325253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 145325254 . G A, 2.29 DRAGENSnpHardQUAL DP=2;MQ=7.00;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,1,0:1,0,0:4:33,0,7,36,36,72:33,0,33:1,0:2.2926e+00,4.2855e+00,1.4286e+01,4.0072e+01,7.4826e+01,7.8843e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,1,0:0,1,1,0 chr1 145325255 . G . LowDepth END=145325289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr1 145325290 . A . LowDepth;LowGQ END=145325343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr1 145325952 . G . PASS END=145325952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145325953 . C . PASS END=145325957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 145325958 . C . PASS END=145325976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:18,0 chr1 145325977 . A . PASS END=145325977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 145325978 . A . PASS END=145325979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 145325980 . G . PASS END=145325980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 145325981 . G . PASS END=145325996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,568:0,41,255:17,0 chr1 145325997 . A . PASS END=145325997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 145325998 . G . PASS END=145326003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:19,0 chr1 145326004 . C . PASS END=145326006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 145326007 . G . PASS END=145326007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 145326008 . A . PASS END=145326028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,652:0,60,255:21,0 chr1 145326029 . C . PASS END=145326029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 145326030 . A . PASS END=145326038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:25,0 chr1 145326039 . T . PASS END=145326040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 145326041 . A . PASS END=145326044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 145326045 . G . PASS END=145326045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145326046 . A . PASS END=145326046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 145326047 . C . PASS END=145326047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145326048 . T . PASS END=145326049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 145326050 . A . PASS END=145326059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 145326060 . G . PASS END=145326068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 145326069 . A . PASS END=145326077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 145326078 . T . PASS END=145326078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 145326079 . T . PASS END=145326080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 145326081 . T . PASS END=145326081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 145326082 . G . PASS END=145326105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,876:0,61,255:25,0 chr1 145326106 . A T, 1.81 DRAGENSnpHardQUAL DP=26;MQ=37.36;MQRankSum=-3.873;ReadPosRankSum=3.815;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:19,7,0:0.269,0.000:26:10,4,0:9,3,0:5:32,0,42,193,679,872:149,0,255:18,0:1.8074e+00,4.6799e+00,4.9930e+01,1.9740e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,1,6:10,9,4,3 chr1 145326107 . T . PASS END=145326112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,925:0,78,255:26,0 chr1 145326113 . T . PASS END=145326113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,791:0,45,255:24,0 chr1 145326114 . T . PASS END=145326124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr1 145329966 . A . PASS END=145329975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr1 145329976 . G . PASS END=145330012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:12,0 chr1 145330013 . A . PASS END=145330013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,266:0,16,255:10,0 chr1 145330014 . A . PASS END=145330023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,321:0,33,255:11,0 chr1 145330024 . A . PASS END=145330024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 145330025 . A . PASS END=145330026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 145330027 . A . PASS END=145330027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,303:0,16,255:9,0 chr1 145330028 . A . PASS END=145330030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 145330031 . G . PASS END=145330032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 145330033 . A . PASS END=145330039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 145330040 . G . LowGQ END=145330040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,261:17,0,255:8,0 chr1 145330041 . A . PASS END=145330044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:12,0 chr1 145330045 . G . PASS END=145330045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:11,0 chr1 145330046 . G . PASS END=145330055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 145330056 . A . PASS END=145330056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 145330057 . A . PASS END=145330060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:11,0 chr1 145330061 . C . PASS END=145330061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 145330062 . C . PASS END=145330074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 145330683 . G . PASS END=145330711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1209:0,83,255:38,0 chr1 145330712 . G . PASS END=145330712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 145330713 . G . PASS END=145330718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1141:0,80,255:30,0 chr1 145330719 . A . PASS END=145330719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:26,0 chr1 145330720 . G . PASS END=145330720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 145330721 . T . PASS END=145330727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:25,0 chr1 145330728 . G . PASS END=145330728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:25,0 chr1 145330729 . G . PASS END=145330741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 145330742 . G . PASS END=145330742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 145330743 . A . PASS END=145330754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:23,0 chr1 145330755 . T . PASS END=145330755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:22,0 chr1 145330756 . C . PASS END=145330763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 145330764 . T . PASS END=145330780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:18:0,42,630:0,54,255:18,0 chr1 145330781 . A . PASS END=145330781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:13,0 chr1 145330782 . C . PASS END=145330782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 145330783 . T . PASS END=145330791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 145330792 . C . PASS END=145330797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 145330798 . A . PASS END=145330798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 145330799 . G . PASS END=145330808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 145330809 . T . PASS END=145330828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 145330829 . A G, 13.13 PASS DP=9;MQ=16.08;MQRankSum=0.322;ReadPosRankSum=1.920;FractionInformativeReads=0.889;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,3,0:0.375,0.000:8:4,1,0:1,2,0:13:48,0,22,107,171,278:106,0,159:5,0:1.3134e+01,2.3007e-01,2.5230e+01,1.0758e+02,2.0585e+02,2.8144e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,0,3:1,4,2,1 chr1 145330830 . T . PASS END=145330835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 145330836 . C . PASS END=145330837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 145330838 . T . PASS END=145330855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 145331575 . A . LowDepth;LowGQ END=145331626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 145333105 . G . LowDepth END=145333156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 145333797 . G . LowDepth;LowGQ END=145333969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145334684 . A . LowDepth;LowGQ END=145334792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145335389 . G . LowDepth;LowGQ END=145335534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145336281 . A . LowDepth;LowGQ END=145336332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145336929 . G . LowDepth;LowGQ END=145337101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145338517 . G . LowDepth;LowGQ END=145338689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145339404 . A . LowDepth;LowGQ END=145339512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145340109 . G . LowDepth;LowGQ END=145340281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145341001 . A . LowDepth;LowGQ END=145341052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145341649 . G . LowDepth;LowGQ END=145341821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr1 145342531 . G . LowDepth;LowGQ END=145342582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,1:1:0:1:0,0,0:0,3,0:1,0 chr1 145343241 . G . LowDepth;LowGQ END=145343262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:1,0 chr1 145343263 . G . LowDepth;LowGQ END=145343413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145344128 . A . LowDepth;LowGQ END=145344236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145345725 . A . PASS END=145345776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,33:0,6,33:3,0 chr1 145346373 . G . LowDepth;LowGQ END=145346481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145346482 . C . LowDepth END=145346545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 145347255 . G . LowDepth;LowGQ END=145347306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145347965 . G . LowDepth;LowGQ END=145348137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145348852 . A . LowDepth;LowGQ END=145348960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145350455 . A . PASS END=145350455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 145350456 . A . PASS END=145350456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 145350457 . A . PASS END=145350468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 145350469 . C A, 5.69 DRAGENSnpHardQUAL DP=9;MQ=6.64;MQRankSum=0.361;ReadPosRankSum=2.219;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,4,0:0.444,0.000:9:2,1,0:3,3,0:5:39,0,8,114,179,293:106,0,167:5,0:5.6883e+00,1.6980e+00,1.2698e+01,1.1599e+02,2.1530e+02,2.9783e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,4,0:3,2,1,3 chr1 145350470 . A . PASS END=145350490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr1 145350491 . A . PASS END=145350506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,217:0,18,217:6,0 chr1 145351103 . G . LowDepth;LowGQ END=145351156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr1 145351157 . G . LowDepth;LowGQ END=145351275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145351985 . G . PASS END=145352014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 145352015 . A . LowGQ END=145352015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:24,0,132:4,0 chr1 145352016 . C . PASS END=145352020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 145352021 . G . LowGQ END=145352021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:13,0,168:5,0 chr1 145352022 . C . PASS END=145352036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:5,0 chr1 145352685 . G . LowGQ END=145352853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,16:2,0 chr1 145352854 . G . LowDepth;LowGQ END=145352857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145353572 . A . PASS END=145353657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:3,0 chr1 145353658 . G . PASS END=145353678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr1 145353679 . A . PASS END=145353680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 145354295 . G . PASS END=145354323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,147,255:40,0 chr1 145354324 . G . PASS END=145354324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:28:48:0,28,1560:0,28,255:40,0 chr1 145354325 . G . PASS END=145354357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:40:0,81,1215:0,120,255:40,0 chr1 145354358 . T . PASS END=145354384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:25,0 chr1 145354385 . A . PASS END=145354386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 145354387 . T . PASS END=145354387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,698:0,11,255:18,0 chr1 145354388 . G . PASS END=145354389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:19,0 chr1 145354390 . C . PASS END=145354402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,50,255:17,0 chr1 145354403 . G . PASS END=145354403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 145354404 . C . PASS END=145354415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 145354416 . G . PASS END=145354416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:14,0 chr1 145354417 . C . PASS END=145354423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 145354424 . T . PASS END=145354424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 145354425 . G . PASS END=145354432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:14,0 chr1 145354433 . G . PASS END=145354433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 145354434 . C . PASS END=145354437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 145354438 . A . PASS END=145354438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 145354439 . G . PASS END=145354439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145354440 . C . PASS END=145354440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 145354441 . A G, 86.83 PASS DP=17;MQ=33.15;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,9,0:0,8,0:48:125,51,0,658,51,658:255,51,0:0,0:8.6832e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,17:0,0,8,9 chr1 145354442 . T . PASS END=145354465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 145354466 . T . PASS END=145354467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 145355187 . A . LowDepth;LowGQ END=145355238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145355837 . G . LowGQ END=145355944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 145355945 . G . PASS END=145355955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 145355956 . G . PASS END=145355970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 145355971 . T . LowGQ END=145355971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:6,0 chr1 145355972 . G . PASS END=145355992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 145355993 . G . PASS END=145356009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 145356719 . G . PASS END=145356745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 145356746 . A . PASS END=145356763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,249:6,0 chr1 145356764 . G . PASS END=145356770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:5:0,9,135:0,15,194:3,0 chr1 145357417 . G . LowDepth;LowGQ END=145357445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:1,0 chr1 145357446 . A . LowDepth;LowGQ END=145357589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145358741 . A . LowDepth END=145358761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 145358762 . C . LowDepth END=145358796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 145358797 . C G, 0.42 DRAGENSnpHardQUAL DP=2;MQ=9.92;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,0,0:1,1,0:10:24,0,4,27,7,34:33,0,11:1,0:4.2438e-01,1.1097e+01,1.8173e+01,3.7757e+01,5.2949e+01,4.7839e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,1,0:0,1,0,1 chr1 145358798 . T . PASS END=145358814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 145358815 . G . PASS END=145358829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 145358830 . T . LowGQ END=145358830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 145358831 . C . PASS END=145358868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:6,0 chr1 145358869 . C T, 34.31 PASS DP=6;MQ=13.60;FractionInformativeReads=0.833 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,1,0:0,4,0:12:72,15,0,194,15,194:210,18,0:0,0:3.4313e+01,1.2313e+01,2.6455e-01,1.9086e+02,4.7083e+01,1.9386e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,0:0,0,1,4 chr1 145358870 . C . PASS END=145358875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr1 145358876 . G . PASS END=145358886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 145365287 . G . PASS END=145365289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 145365290 . C . PASS END=145365297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 145365298 . A . PASS END=145365298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 145365299 . G . PASS END=145365299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 145365300 . C . PASS END=145365306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr1 145365307 . A . PASS END=145365307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 145365308 . T . PASS END=145365309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 145365310 . A . PASS END=145365310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 145365311 . G . PASS END=145365315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 145365316 . G . PASS END=145365317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 145365318 . C . PASS END=145365318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 145365319 . C . PASS END=145365331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 145365332 . G . PASS END=145365332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 145365333 . G . PASS END=145365394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,786:0,61,255:26,0 chr1 145365395 . G . PASS END=145365405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,59,255:19,0 chr1 145365406 . G . PASS END=145365409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 145365410 . C . PASS END=145365432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:15:0,43,551:0,43,255:19,0 chr1 145365433 . A . PASS END=145365433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 145365434 . T . PASS END=145365440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 145365441 . T . PASS END=145365441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 145365442 . T . PASS END=145365444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145365445 . C . PASS END=145365459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 145366179 . A . PASS END=145366207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 145366208 . G . PASS END=145366230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 145366827 . G . PASS END=145366856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 145366857 . G . LowGQ END=145366857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr1 145366858 . C . PASS END=145366880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 145366881 . G . PASS END=145366881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 145366882 . G . PASS END=145366885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 145366886 . G . LowGQ END=145366886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr1 145366887 . A . PASS END=145366893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 145366894 . T . LowGQ END=145366894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,117:21,0,138:5,0 chr1 145366895 . C . PASS END=145366898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 145366899 . T . PASS END=145366940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:9,0 chr1 145366941 . C . PASS END=145366945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 145366946 . G . PASS END=145366947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 145366948 . G . PASS END=145366948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 145366949 . C . PASS END=145366951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 145366952 . T . PASS END=145366952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:9,0 chr1 145366953 . T . PASS END=145366976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 145366977 . T . PASS END=145366993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 145366994 . T . PASS END=145366994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:8,0 chr1 145366995 . G . PASS END=145366999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 145367714 . A . PASS END=145367782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:83:53:0,83,1621:0,83,255:40,0 chr1 145367783 . G . PASS END=145367783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,9:69:57:69:0,57,1808:0,57,255:40,0 chr1 145367784 . A . PASS END=145367793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:86:68:0,86,1687:0,86,255:40,0 chr1 145367794 . G . PASS END=145367794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,10:68:22:68:0,22,1501:0,22,255:40,0 chr1 145367795 . A . PASS END=145367799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:86:68:0,86,1600:0,86,255:40,0 chr1 145367800 . G . PASS END=145367800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,9:67:28:67:0,28,1599:0,28,255:40,0 chr1 145367801 . A . PASS END=145367801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 145367802 . T . PASS END=145367802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,8:67:67:67:0,67,1565:0,67,255:40,0 chr1 145367803 . C . PASS END=145367822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:57:0,120,1800:0,171,255:40,0 chr1 145368448 . G . PASS END=145368460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,1:124:99:112:0,120,1800:0,255,255:40,0 chr1 145368461 . A C, 10.64 PASS DP=133;MQ=81.07;MQRankSum=2.291;ReadPosRankSum=4.292;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:109,24,0:0.180,0.000:133:54,14,0:55,10,0:11:45,0,48,857,3854,4711:255,0,255:40,0:1.0641e+01,3.9192e-01,5.1042e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:76,33,11,13:59,50,13,11 chr1 145368462 . A . PASS END=145368472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:137,1:138:99:132:0,120,1800:0,255,255:40,0 chr1 145368473 . G . LowGQ END=145368473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,14:141:0:141:0,0,4359:88,0,255:40,0 chr1 145368474 . T . PASS END=145368516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:166,1:167:99:142:0,120,1800:0,255,255:40,0 chr1 145368597 . C . PASS END=145368684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:148,1:149:99:105:0,120,1800:0,255,255:40,0 chr1 145413194 . G . PASS END=145413194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 145413235 . T . PASS END=145413235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 145413269 . A . PASS END=145413269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 145413273 . C . PASS END=145413273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 145413313 . C . PASS END=145413313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 145413362 . C . PASS END=145413362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 145414782 . A . PASS END=145414788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,925:0,72,255:25,0 chr1 145414789 . A . PASS END=145414789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 145414790 . G . PASS END=145414801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 145414802 . C . PASS END=145414802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145414803 . C . PASS END=145414805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 145414806 . A . PASS END=145414865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1149:0,80,255:33,0 chr1 145414866 . C . PASS END=145414866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 145414867 . T . PASS END=145414870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 145414871 . T . PASS END=145414871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 145414872 . G . PASS END=145414874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 145414875 . C . PASS END=145414878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,972:0,70,255:24,0 chr1 145415279 . C . PASS END=145415279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 145415280 . T . PASS END=145415286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 145415287 . C . PASS END=145415288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 145415289 . A . PASS END=145415289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 145415290 . T . PASS END=145415290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 145415291 . G . PASS END=145415301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 145415302 . C . PASS END=145415302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 145415303 . G . PASS END=145415306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 145415307 . C . PASS END=145415307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 145415308 . A . PASS END=145415310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 145415311 . G . PASS END=145415318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,900:0,62,255:26,0 chr1 145415319 . C . PASS END=145415321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 145415322 . A . PASS END=145415323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 145415324 . C . PASS END=145415332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 145415333 . T . PASS END=145415333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:28,0 chr1 145415334 . G . PASS END=145415350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:30,0 chr1 145415351 . G . PASS END=145415351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 145415352 . T . PASS END=145415356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 145415357 . C . PASS END=145415363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1039:0,71,255:25,0 chr1 145415364 . A . PASS END=145415365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:48:29:0,48,970:0,48,255:25,0 chr1 145415366 . T . PASS END=145415366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145415367 . T . PASS END=145415375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,925:0,64,255:26,0 chr1 145415376 . A . PASS END=145415376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,870:0,37,255:24,0 chr1 145415377 . G . PASS END=145415378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 145415379 . A . PASS END=145415379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,864:0,50,255:25,0 chr1 145415380 . G . PASS END=145415381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 145415382 . A . PASS END=145415382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:24,0 chr1 145415383 . G . PASS END=145415383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 145415384 . G . PASS END=145415385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:42:27:0,42,825:0,42,255:24,0 chr1 145415386 . G . PASS END=145415386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 145415387 . G . PASS END=145415387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:24,0 chr1 145415388 . C . PASS END=145415388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145415389 . C . PASS END=145415389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,901:0,32,255:21,0 chr1 145415390 . G . PASS END=145415393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,73,255:24,0 chr1 145415394 . T . PASS END=145415394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:22,0 chr1 145415395 . G . PASS END=145415399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,897:0,70,255:25,0 chr1 145415400 . G . PASS END=145415502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1033:0,84,255:37,0 chr1 145415503 . C . PASS END=145415503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:34,0 chr1 145415504 . A . PASS END=145415543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,92,255:36,0 chr1 145415544 . C . PASS END=145415550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:70:34:0,70,1125:0,70,255:27,0 chr1 145415551 . C . PASS END=145415579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1178:0,83,255:31,0 chr1 145415580 . C . PASS END=145415583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 145415584 . C . PASS END=145415584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 145415585 . T . PASS END=145415585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1021:0,60,255:25,0 chr1 145415586 . T . PASS END=145415591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145415592 . C . PASS END=145415593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 145415594 . C . PASS END=145415594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr1 145415595 . G . PASS END=145415609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr1 145415610 . T . PASS END=145415660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:19,0 chr1 145415661 . T . PASS END=145415661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 145415662 . C . PASS END=145415668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:16,0 chr1 145415669 . G . PASS END=145415672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 145415673 . C . PASS END=145415688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 145415689 . T . PASS END=145415717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:13:0,30,450:0,31,255:14,0 chr1 145415718 . C . PASS END=145415719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 145415720 . A . PASS END=145415720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 145415721 . T . PASS END=145415723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 145415724 . C . PASS END=145415724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 145415725 . T . PASS END=145415726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145415727 . T . PASS END=145415727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 145415728 . C . PASS END=145415728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 145415729 . A . PASS END=145415732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 145415733 . A . PASS END=145415733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:13,0 chr1 145415734 . T . PASS END=145415734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr1 145415735 . G . PASS END=145415755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 145415756 . C . PASS END=145415756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 145415757 . T . PASS END=145415760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 145415761 . C . PASS END=145415763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,551:0,34,255:15,0 chr1 145415764 . G . PASS END=145415772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 145415773 . T . PASS END=145415774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 145415775 . C . PASS END=145415776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 145415777 . T . PASS END=145415777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 145415778 . C . PASS END=145415786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 145415787 . A . PASS END=145415787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 145415788 . G . PASS END=145415790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 145415791 . A . PASS END=145415791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 145415792 . C . PASS END=145415797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 145415798 . C . PASS END=145415798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 145415799 . C . PASS END=145415802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 145415803 . A . PASS END=145415803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 145415804 . T . PASS END=145415804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:15,0 chr1 145415805 . G . PASS END=145415806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 145415807 . C . PASS END=145415807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr1 145415808 . G . PASS END=145415809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 145415810 . T . PASS END=145415810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 145415811 . G . PASS END=145415817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 145415818 . A . PASS END=145415822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,540:0,31,255:13,0 chr1 145415823 . T . PASS END=145415823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 145415824 . A . PASS END=145415825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 145415826 . C . PASS END=145415826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 145415827 . G . PASS END=145415828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 145415829 . C . PASS END=145415829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 145415830 . A . PASS END=145415833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 145415834 . G . LowGQ END=145415834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:11,0 chr1 145415835 . G . PASS END=145415838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:12:0,23,360:0,23,255:9,0 chr1 145416313 . C . PASS END=145416323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:18,0 chr1 145416324 . A . PASS END=145416325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 145416326 . T . PASS END=145416347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 145416348 . T . PASS END=145416351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,839:0,63,255:23,0 chr1 145416352 . C . PASS END=145416352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 145416353 . A . PASS END=145416360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:25,0 chr1 145416361 . T . PASS END=145416361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,790:0,42,255:22,0 chr1 145416362 . A . PASS END=145416400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:25,0 chr1 145416401 . A . PASS END=145416401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:20,0 chr1 145416402 . T . PASS END=145416423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,845:0,69,255:23,0 chr1 145416424 . C . PASS END=145416425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 145416426 . A . PASS END=145416440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,861:0,69,255:23,0 chr1 145416441 . T . PASS END=145416441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,624:0,52,255:22,0 chr1 145416442 . T . PASS END=145416453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 145416454 . A . PASS END=145416454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 145416455 . C . PASS END=145416505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,869:0,64,255:26,0 chr1 145416506 . C . PASS END=145416506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:21,0 chr1 145416507 . T . PASS END=145416509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 145416510 . A . PASS END=145416510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 145416511 . A . PASS END=145416525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,976:0,65,255:26,0 chr1 145416526 . G . PASS END=145416533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 145416534 . G . PASS END=145416556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,917:0,75,255:26,0 chr1 145416557 . C . PASS END=145416557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145416558 . A . PASS END=145416569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,939:0,67,255:26,0 chr1 145416570 . C . PASS END=145416570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145416571 . A . PASS END=145416585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,902:0,62,255:26,0 chr1 145416586 . G . PASS END=145416586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:23,0 chr1 145416587 . A . PASS END=145416589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,945:0,75,255:25,0 chr1 145416590 . A . PASS END=145416590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 145416591 . G . PASS END=145416594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 145416595 . C . PASS END=145416595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:20,0 chr1 145416596 . T . PASS END=145416600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 145416601 . C . PASS END=145416601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 145416602 . T . PASS END=145416602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 145416603 . C . PASS END=145416604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 145416605 . G . PASS END=145416608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 145416609 . T . PASS END=145416609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:19,0 chr1 145416610 . G . PASS END=145416611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 145416612 . G . PASS END=145416619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 145416620 . C . PASS END=145416628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 145416629 . A . PASS END=145416629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 145416630 . G . PASS END=145416634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 145416635 . T . PASS END=145416635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 145416636 . C . PASS END=145416684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,878:0,65,255:24,0 chr1 145416685 . A . PASS END=145416685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 145416686 . G . PASS END=145416687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 145416688 . C . PASS END=145416688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 145416689 . G . PASS END=145416747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:25,0 chr1 145416748 . G . PASS END=145416748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr1 145416749 . T . PASS END=145416754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 145416755 . T . PASS END=145416755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 145416756 . T . PASS END=145416853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,878:0,62,255:26,0 chr1 145416854 . A . PASS END=145416854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145416855 . T . PASS END=145416859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 145416860 . G . PASS END=145416865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 145416866 . C . PASS END=145416876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1006:0,68,255:26,0 chr1 145416877 . G . PASS END=145416878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 145416879 . A . PASS END=145416922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,734:0,67,255:26,0 chr1 145416923 . T . PASS END=145416923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr1 145416924 . T . PASS END=145416928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 145416929 . T . PASS END=145416930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:18,0 chr1 145416931 . C . PASS END=145416931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:17,0 chr1 145416932 . A . PASS END=145416936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:17,0 chr1 145417126 . G . PASS END=145417126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 145417133 . G . PASS END=145417134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 145417224 . A . PASS END=145417224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr1 145417308 . A . PASS END=145417308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr1 145417510 . A . PASS END=145417510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 145438803 . A . PASS END=145438809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 145438810 . T . PASS END=145438810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:20,0 chr1 145438811 . G . PASS END=145438819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,815:0,69,255:25,0 chr1 145438820 . G . PASS END=145438820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 145438821 . A . PASS END=145438824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr1 145438825 . A . PASS END=145438825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,771:0,48,255:24,0 chr1 145438826 . G . PASS END=145438837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,909:0,65,255:25,0 chr1 145438838 . G . PASS END=145438884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1039:0,81,255:40,0 chr1 145438885 . C . PASS END=145438885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1189:0,70,255:36,0 chr1 145438886 . T . PASS END=145438932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1340:0,92,255:40,0 chr1 145438933 . T . PASS END=145438933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:32,0 chr1 145438934 . T . PASS END=145438941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:34,0 chr1 145438942 . T . PASS END=145438942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1169:0,58,255:30,0 chr1 145438943 . G . PASS END=145438984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1085:0,80,255:33,0 chr1 145438985 . G . PASS END=145438993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,86,255:25,0 chr1 145438994 . A . PASS END=145438994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,856:0,54,255:23,0 chr1 145438995 . C . PASS END=145439009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:25,0 chr1 145439010 . C . PASS END=145439036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 145439037 . G . PASS END=145439047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 145439048 . A . PASS END=145439052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,29,255:8,0 chr1 145439508 . A . PASS END=145439516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr1 145439517 . A . PASS END=145439517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 145439518 . A . PASS END=145439522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 145439523 . T . PASS END=145439523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1030:0,35,255:26,0 chr1 145439524 . C . PASS END=145439552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1168:0,83,255:36,0 chr1 145439553 . A . PASS END=145439553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:35,0 chr1 145439554 . C . PASS END=145439555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1457:0,114,255:38,0 chr1 145439556 . G . PASS END=145439556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1356:0,76,255:37,0 chr1 145439557 . C . PASS END=145439665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,107,1449:0,107,255:40,0 chr1 145439778 . G . PASS END=145439925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,104,1710:0,104,255:40,0 chr1 145440038 . G . PASS END=145440140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:87:44:0,87,1664:0,87,255:40,2 chr1 145440269 . G . PASS END=145440376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:33:0,86,1122:0,86,255:38,0 chr1 145440377 . A . PASS END=145440377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1394:0,73,255:34,0 chr1 145440378 . G . PASS END=145440471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1221:0,86,255:37,0 chr1 145440472 . A . PASS END=145440472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 145440473 . T . PASS END=145440489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:32,0 chr1 145440490 . G . PASS END=145440525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,870:0,61,255:26,0 chr1 145440632 . A . PASS END=145440632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 145440633 . T . PASS END=145440647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 145440648 . C . PASS END=145440649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 145440650 . G . PASS END=145440652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 145440653 . T . PASS END=145440653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 145440654 . C . PASS END=145440656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 145440657 . A . PASS END=145440657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 145440658 . G . PASS END=145440660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,931:0,67,255:26,0 chr1 145440661 . G . PASS END=145440662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 145440663 . T . PASS END=145440665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 145440666 . T . PASS END=145440788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1011:0,80,255:37,0 chr1 145440902 . C . PASS END=145440903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 145440904 . C . PASS END=145440905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 145440906 . T . PASS END=145440907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,820:0,53,255:22,0 chr1 145440908 . C . PASS END=145440909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,970:0,72,255:26,0 chr1 145440910 . T . PASS END=145440912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:30,0 chr1 145440913 . T . PASS END=145440913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 145440914 . A . PASS END=145441101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:33:0,91,1250:0,91,255:40,0 chr1 145441183 . G . PASS END=145441218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,119,1605:0,119,255:40,0 chr1 145456637 . T . PASS END=145456687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,100,1466:0,100,255:40,0 chr1 145456688 . T . PASS END=145456723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:49:0,93,1395:0,117,255:40,0 chr1 145456991 . C . PASS END=145457104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:67:0,120,1800:0,144,255:40,3 chr1 145457236 . C . PASS END=145457304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1103:0,80,255:38,0 chr1 145457305 . A . PASS END=145457305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:31,0 chr1 145457306 . A . PASS END=145457309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:31,0 chr1 145457548 . G . PASS END=145457605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1296:0,98,255:40,0 chr1 145457935 . C . PASS END=145458003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,107,1794:0,107,255:40,0 chr1 145459652 . C . PASS END=145459652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 145459653 . T . PASS END=145459653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,929:0,65,255:26,0 chr1 145459654 . C . PASS END=145459776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1181:0,84,255:40,0 chr1 145459777 . A . PASS END=145459781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:24,0 chr1 145460097 . A . PASS END=145460097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 145460098 . G . PASS END=145460098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 145460099 . G . PASS END=145460099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 145460100 . G . PASS END=145460118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr1 145460119 . A . PASS END=145460119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 145460120 . G . PASS END=145460129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 145460130 . G . PASS END=145460130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 145460131 . G . PASS END=145460137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 145460138 . C . PASS END=145460138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 145460139 . A . PASS END=145460141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 145460142 . C . PASS END=145460142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 145460143 . C . PASS END=145460151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 145460152 . A . PASS END=145460153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 145460154 . G . PASS END=145460154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 145460155 . C . PASS END=145460166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1008:0,68,255:24,0 chr1 145460167 . A . PASS END=145460167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:21,0 chr1 145460168 . C . PASS END=145460178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 145460179 . A . PASS END=145460222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,43,255:19,0 chr1 145460264 . C . PASS END=145460264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 145473329 . A . PASS END=145473330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 145473331 . G . PASS END=145473331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 145473332 . T . PASS END=145473333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 145473334 . G . PASS END=145473334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 145473335 . C . PASS END=145473347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:18,0 chr1 145473348 . A . PASS END=145473348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 145473349 . C . PASS END=145473360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,623:0,54,255:19,0 chr1 145473361 . G . PASS END=145473362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 145473363 . C . PASS END=145473377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 145473378 . A . PASS END=145473403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,665:0,63,255:22,0 chr1 145473404 . G . PASS END=145473408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 145473409 . A . PASS END=145473435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 145473436 . G . PASS END=145473518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 145473519 . T . PASS END=145473519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 145473520 . G . PASS END=145473527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:17,0 chr1 145473528 . G . PASS END=145473528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 145473529 . C . PASS END=145473541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 145473542 . A . PASS END=145473542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 145473543 . T . PASS END=145473585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:16,0 chr1 145473586 . C . PASS END=145473588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 145473589 . G . PASS END=145473641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 145473642 . C . PASS END=145473643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145473644 . G . PASS END=145473644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 145473645 . T . PASS END=145473649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145473650 . G . PASS END=145473660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145473661 . C . PASS END=145473661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 145473662 . G . PASS END=145473669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 145473670 . T . PASS END=145473670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 145473671 . C . PASS END=145473673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 145473674 . G . PASS END=145473674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 145473675 . T . PASS END=145473676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 145473677 . C . PASS END=145473679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145473680 . G . PASS END=145473682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145473683 . C . PASS END=145473683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 145473684 . T . PASS END=145473707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,566:0,48,255:18,0 chr1 145473708 . T . PASS END=145473708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr1 145473709 . T . PASS END=145473722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,611:0,40,255:19,0 chr1 145473723 . A . PASS END=145473723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145473724 . C . PASS END=145473764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr1 145473765 . C . PASS END=145473777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 145473778 . C . PASS END=145473778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 145473779 . T . PASS END=145473803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,793:0,66,255:23,0 chr1 145473804 . A . PASS END=145473804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 145473805 . T . PASS END=145473819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,728:0,71,255:24,0 chr1 145473820 . A . PASS END=145473820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 145473821 . T . PASS END=145473825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 145473826 . A . PASS END=145473826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 145473827 . G . PASS END=145473850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 145473851 . T . PASS END=145473851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,836:0,28,255:21,0 chr1 145473852 . C . PASS END=145473855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 145473856 . T . PASS END=145473856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 145473857 . A . PASS END=145473860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 145473861 . C . PASS END=145473861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 145473862 . G . PASS END=145473869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:24,0 chr1 145473870 . G . PASS END=145473870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 145473871 . C . PASS END=145473884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 145473885 . A . PASS END=145473885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 145473886 . A . PASS END=145473891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,825:0,69,255:23,0 chr1 145473892 . A . PASS END=145473892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:20,0 chr1 145473893 . C . PASS END=145473900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 145473901 . C . PASS END=145473901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,807:0,41,255:20,0 chr1 145473902 . G . PASS END=145473903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 145473904 . T . PASS END=145473935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:17:0,44,675:0,44,255:18,0 chr1 145473936 . G . PASS END=145473936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 145473937 . C . PASS END=145473963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 145473964 . C . PASS END=145473964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145473965 . G . PASS END=145473978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 145473979 . T . PASS END=145473980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 145473981 . T . PASS END=145473985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 145473986 . A . PASS END=145473986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 145473987 . A . PASS END=145474004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:17,0 chr1 145474005 . C . PASS END=145474006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 145474007 . C . PASS END=145474007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 145474008 . C . PASS END=145474080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,499:0,45,255:19,0 chr1 145474081 . C . PASS END=145474081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,570:0,18,255:18,0 chr1 145474082 . C . PASS END=145474083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,660:0,43,255:19,0 chr1 145474084 . A . PASS END=145474084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 145474085 . G . PASS END=145474085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 145474086 . T . PASS END=145474086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 145474087 . G . PASS END=145474087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 145474088 . G . PASS END=145474088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 145474089 . C . PASS END=145474089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 145474090 . C . PASS END=145474092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:22,0 chr1 145474093 . T . PASS END=145474093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,676:0,33,255:20,0 chr1 145474094 . C . PASS END=145474095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 145474096 . T . PASS END=145474096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,657:0,16,255:19,0 chr1 145474097 . C . PASS END=145474098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 145474099 . A . PASS END=145474102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 145474103 . G . PASS END=145474103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 145474104 . T . PASS END=145474104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 145474105 . C . PASS END=145474105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 145474106 . C . PASS END=145474111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 145474112 . A . PASS END=145474112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 145474113 . C . PASS END=145474113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 145474114 . T . PASS END=145474114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,723:0,17,255:21,0 chr1 145474115 . G . PASS END=145474115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 145474116 . A . PASS END=145474118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 145474119 . G . PASS END=145474120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 145474121 . A . PASS END=145474121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:19,0 chr1 145474122 . G . PASS END=145474122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 145474123 . A . PASS END=145474125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 145474126 . G . PASS END=145474126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 145474127 . G . PASS END=145474129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 145474130 . A . PASS END=145474137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr1 145474138 . C . PASS END=145474138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:17,0 chr1 145474139 . T . PASS END=145474141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 145474142 . A . PASS END=145474142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr1 145474143 . C . PASS END=145474209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,576:0,44,255:19,0 chr1 145474210 . C . PASS END=145474224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 145474225 . C . PASS END=145474234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,762:0,52,255:19,0 chr1 145474235 . G . PASS END=145474237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145474238 . A . PASS END=145474238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:20,0 chr1 145474239 . A . PASS END=145474261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,781:0,66,255:25,0 chr1 145474262 . T . PASS END=145474262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:24,0 chr1 145474263 . C . PASS END=145474278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,969:0,75,255:25,0 chr1 145474279 . A . PASS END=145474279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 145474280 . C . PASS END=145474301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,876:0,61,255:26,0 chr1 145474302 . C . PASS END=145474304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 145474305 . C . PASS END=145474307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 145474308 . C . PASS END=145474316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 145474317 . G . PASS END=145474347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 145474348 . G . PASS END=145474359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:16,0 chr1 145474360 . T . PASS END=145474360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:15,0 chr1 145474361 . G . PASS END=145474413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,48,255:18,0 chr1 145474414 . C . PASS END=145474414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 145474415 . C . PASS END=145474426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 145474427 . T . PASS END=145474428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 145474429 . C . PASS END=145474440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 145474441 . C . PASS END=145474458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 145474459 . T . PASS END=145474459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 145474460 . C . PASS END=145474475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 145474476 . C . PASS END=145474492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 145474493 . G . PASS END=145474493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 145474494 . G . PASS END=145474529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 145474530 . C . PASS END=145474540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,249:6,0 chr1 145474541 . G . PASS END=145474607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 145474608 . C . PASS END=145474616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 145474617 . T . PASS END=145474617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 145474618 . C . LowGQ END=145474618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:8,0 chr1 145474619 . A . PASS END=145474619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr1 145474620 . G . PASS END=145474621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 145474622 . C . PASS END=145474622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 145474623 . C . PASS END=145474623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 145474624 . C . PASS END=145474625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 145474626 . A . LowGQ END=145474626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:19,0,255:10,0 chr1 145474627 . C . PASS END=145474627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr1 145474628 . C . PASS END=145474629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 145474630 . T . PASS END=145474631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,390:0,22,255:12,0 chr1 145474632 . C . PASS END=145474633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 145474634 . A . PASS END=145474635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:12:15:0,12,410:0,12,255:13,0 chr1 145474636 . C . PASS END=145474636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:14,0 chr1 145474637 . C . PASS END=145474641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 145474642 . C . PASS END=145474643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 145474644 . T . PASS END=145474645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 145474646 . C . PASS END=145474647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 145474648 . C . PASS END=145474652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:15,0 chr1 145474653 . A . PASS END=145474655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 145474656 . C . PASS END=145474656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 145474657 . C . PASS END=145474658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 145474659 . G . PASS END=145474660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 145474661 . G . PASS END=145474661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,476:0,17,255:13,0 chr1 145474662 . G . PASS END=145474662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 145474663 . T . LowGQ END=145474663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,402:2,0,255:12,0 chr1 145474664 . C . PASS END=145474671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 145474672 . T . PASS END=145474672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 145474673 . T . PASS END=145474673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 145474674 . C . PASS END=145474675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr1 145474676 . T . PASS END=145474676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145474677 . T . PASS END=145474678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 145474679 . C . PASS END=145474679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 145474680 . C . PASS END=145474681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145474682 . G . PASS END=145474682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145474683 . C . PASS END=145474683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 145474684 . C . PASS END=145474686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145474687 . T . PASS END=145474687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 145474688 . C . PASS END=145474689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145474690 . T . PASS END=145474691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 145474692 . A . PASS END=145474693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145474694 . G . PASS END=145474695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 145474696 . C . PASS END=145474710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,440:0,45,255:17,0 chr1 145474711 . T . PASS END=145474711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 145474712 . C . PASS END=145474712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 145474713 . C . PASS END=145474713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 145474714 . C . PASS END=145474714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 145474715 . A . PASS END=145474715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 145474716 . G . PASS END=145474720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr1 145474721 . A . PASS END=145474721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,543:0,7,255:16,0 chr1 145474722 . A . PASS END=145474722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr1 145474723 . G . PASS END=145474728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,585:0,54,255:18,0 chr1 145474729 . A . PASS END=145474729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,421:0,4,255:15,0 chr1 145474730 . T . PASS END=145474734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 145474735 . G . PASS END=145474735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 145474736 . A . PASS END=145474736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 145474737 . G . PASS END=145474737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 145474738 . A . PASS END=145474738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145474739 . C . PASS END=145474746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 145474747 . C . PASS END=145474749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 145474750 . G . PASS END=145474750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 145474751 . C . PASS END=145474751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 145474752 . A . PASS END=145474752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,754:0,6,255:22,0 chr1 145474753 . G . PASS END=145474761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 145474762 . G . PASS END=145474763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 145474764 . T . PASS END=145474768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 145474769 . C . PASS END=145474769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 145474770 . T . PASS END=145474771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 145474772 . C . PASS END=145474779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 145474780 . C . PASS END=145474783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145474784 . C . PASS END=145474819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:19,0 chr1 145477159 . A . PASS END=145477163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 145477164 . G . PASS END=145477191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 145477192 . G . PASS END=145477192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 145477193 . G . PASS END=145477211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 145477212 . G . PASS END=145477212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 145477213 . G . PASS END=145477219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,233:6,0 chr1 145477220 . T . PASS END=145477239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr1 145477240 . G . LowGQ END=145477243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:5:0,0,116:0,0,140:3,0 chr1 145477244 . C . PASS END=145477256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:4,0 chr1 145477257 . T C, 30.79 PASS DP=4;MQ=250.00;MQRankSum=1.026;ReadPosRankSum=-1.026;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,2,0:0.500,0.000:4:1,0,0:1,2,0:31:66,0,47,72,72,143:66,0,66:2,0:3.0787e+01,3.6686e-03,4.9994e+01,7.1576e+01,1.0630e+02,1.4611e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,1,1:1,1,1,1 chr1 145477258 . G . PASS END=145477260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 145477261 . A . PASS END=145477279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr1 145477280 . G . PASS END=145477294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 145477295 . C . PASS END=145477328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 145477329 . C . PASS END=145477329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 145477330 . C . PASS END=145477339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 145477340 . C . PASS END=145477345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:3,0 chr1 145477346 . G . PASS END=145477378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:6,0 chr1 145477379 . C . PASS END=145477391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 145477392 . A . PASS END=145477395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,181:6,0 chr1 145477396 . G . PASS END=145477419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 145477420 . T . PASS END=145477450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,174:6,0 chr1 145487304 . T . PASS END=145487467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:30:0,86,1119:0,86,255:40,0 chr1 145492235 . T . PASS END=145492235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1119:0,96,255:32,0 chr1 145492236 . T . PASS END=145492236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:31,0 chr1 145492237 . T . PASS END=145492241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:33,0 chr1 145492242 . C . PASS END=145492242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:32,0 chr1 145492243 . C . PASS END=145492365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1260:0,85,255:40,0 chr1 145492366 . A . PASS END=145492367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 145492368 . C . PASS END=145492369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 145492370 . T . PASS END=145492375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 145497393 . G . PASS END=145497488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,113,1604:0,113,255:40,0 chr1 145498103 . G . PASS END=145498180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:39:0,82,1350:0,82,255:40,0 chr1 145498536 . G . PASS END=145498559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:18,0 chr1 145498560 . C . PASS END=145498560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 145498561 . G . PASS END=145498612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,658:0,54,255:19,0 chr1 145498613 . G . PASS END=145498619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 145498620 . A . PASS END=145498621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 145498622 . T . PASS END=145498634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:21,0 chr1 145498635 . C . PASS END=145498636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 145498637 . G . PASS END=145498645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 145498646 . G . PASS END=145498662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr1 145498663 . G . PASS END=145498671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145498672 . A . PASS END=145498723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:16,0 chr1 145498724 . T . PASS END=145498740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 145498741 . C . PASS END=145498747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 145498748 . G . LowGQ END=145498748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 145498749 . T . PASS END=145498751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 145498752 . G . LowGQ END=145498752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr1 145498753 . G . PASS END=145498753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145498754 . C . LowGQ END=145498758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:8,0 chr1 145498759 . T . PASS END=145498759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145498760 . G . LowGQ END=145498762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:8,0 chr1 145498763 . T . PASS END=145498763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145498764 . T . LowGQ END=145498764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,233:12,0,245:8,0 chr1 145498765 . C . PASS END=145498766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 145498767 . T . LowGQ END=145498768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 145498769 . C . PASS END=145498769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 145498770 . A . LowGQ END=145498770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:7,0 chr1 145498771 . A . PASS END=145498771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 145498772 . C . LowGQ END=145498772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:6,0 chr1 145498773 . T . PASS END=145498774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 145498775 . C . LowGQ END=145498778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,247:12,0,255:6,0 chr1 145507646 . G . PASS END=145507646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 145507648 . G . PASS END=145507648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 145507667 . A . PASS END=145507667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:18,0 chr1 145507668 . T . PASS END=145507674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 145507675 . C . PASS END=145507717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr1 145507718 . G . PASS END=145507718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 145507719 . A . PASS END=145507727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,900:0,61,255:23,0 chr1 145507728 . G . PASS END=145507729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 145507730 . G . PASS END=145507733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 145507765 . G . PASS END=145507765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 145508013 . C . PASS END=145508013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 145508016 . A . PASS END=145508075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,99,1544:0,99,255:40,0 chr1 145508207 . A . PASS END=145508264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1125:0,87,255:32,0 chr1 145508265 . T . PASS END=145508283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 145508284 . T . PASS END=145508284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 145508291 . A . PASS END=145508291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 145508462 . C . PASS END=145508462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 145508475 . C . PASS END=145508611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,114,1710:0,149,255:40,0 chr1 145508614 . A . PASS END=145508614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 145508916 . G . PASS END=145508916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 145508917 . G . PASS END=145508922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 145508923 . C . PASS END=145508923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 145508924 . T . PASS END=145508927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:31,0 chr1 145508928 . G . PASS END=145508928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:29,0 chr1 145508929 . T . PASS END=145508933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1081:0,82,255:32,0 chr1 145508934 . T . PASS END=145508934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:31,0 chr1 145508935 . A . PASS END=145508972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1225:0,84,255:40,0 chr1 145508973 . C . PASS END=145508973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:49:44:0,49,1234:0,49,255:37,0 chr1 145508974 . T . PASS END=145509052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:43:0,105,1523:0,105,255:40,0 chr1 145509166 . A . PASS END=145509211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,105,1620:0,105,255:40,0 chr1 145509217 . C . PASS END=145509217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,99,1485:0,107,255:32,0 chr1 145515394 . A . PASS END=145515394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 145516401 . A . PASS END=145516401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1119:0,44,255:33,0 chr1 145516402 . T . PASS END=145516402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:34,0 chr1 145516403 . G . PASS END=145516408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1289:0,108,255:36,0 chr1 145516409 . C . PASS END=145516409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:34,0 chr1 145516410 . T . PASS END=145516425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:37:0,84,1319:0,84,255:39,0 chr1 145516426 . C . PASS END=145516433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:39:0,92,1334:0,92,255:40,0 chr1 145516434 . C . PASS END=145516434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1441:0,76,255:39,0 chr1 145516435 . A . PASS END=145516435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 145516436 . A . PASS END=145516436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1258:0,73,255:37,0 chr1 145516437 . G . PASS END=145516456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1304:0,84,255:39,0 chr1 145516644 . A . PASS END=145516657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1197:0,88,255:36,0 chr1 145517273 . G . PASS END=145517281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:32,0 chr1 145517282 . G . PASS END=145517282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 145517283 . T . PASS END=145517283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:32,0 chr1 145517284 . A . PASS END=145517284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 145517285 . T . PASS END=145517388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:34:0,90,1264:0,102,255:40,0 chr1 145517393 . G . PASS END=145517393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 145518071 . T . PASS END=145518071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 145518072 . T . PASS END=145518074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 145518075 . A . PASS END=145518075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 145518076 . C . PASS END=145518080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 145518081 . G . PASS END=145518081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr1 145518082 . G . PASS END=145518090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1100:0,87,255:35,0 chr1 145518091 . G . PASS END=145518091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 145518092 . C . PASS END=145518244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:35:0,85,1327:0,85,255:40,0 chr1 145518245 . A . PASS END=145518245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1421:0,79,255:33,0 chr1 145518246 . G . PASS END=145518247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:33,0 chr1 145518248 . A . PASS END=145518248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1241:0,45,255:30,0 chr1 145518249 . G . PASS END=145518261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1188:0,85,255:34,0 chr1 145518262 . C . PASS END=145518262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:25,0 chr1 145518263 . G . PASS END=145518269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145518270 . C . PASS END=145518270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:23,0 chr1 145518271 . A . PASS END=145518272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 145518281 . T . PASS END=145518281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 145522507 . G . PASS END=145522507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 145522514 . G . PASS END=145522675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:39:0,81,1215:0,105,255:40,0 chr1 145522676 . A . PASS END=145522676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 145522677 . G . PASS END=145522679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,114,255:28,0 chr1 145522680 . G . PASS END=145522693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:28:0,69,1024:0,71,255:26,0 chr1 145522694 . A . PASS END=145522753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:38,0 chr1 145522754 . C . PASS END=145522754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:36,0 chr1 145522755 . C . PASS END=145522899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,86,255:40,0 chr1 145522900 . G . PASS END=145522900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 145522901 . G . PASS END=145522905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 145522906 . G . PASS END=145522917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr1 145522918 . G . PASS END=145522919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 145525066 . A . PASS END=145525117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:33:0,87,1305:0,98,255:39,0 chr1 145527613 . G . PASS END=145527938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1210:0,85,255:40,0 chr1 145527939 . G . PASS END=145527939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 145527940 . C . PASS END=145527941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145527942 . C . PASS END=145527942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 145527943 . C . PASS END=145527947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 145527948 . G . PASS END=145527948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr1 145527949 . G . PASS END=145527952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 145527953 . G . PASS END=145527953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:28,0 chr1 145527954 . G . PASS END=145527987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr1 145527988 . C . PASS END=145527990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 145527991 . C . PASS END=145527991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:20,0 chr1 145527992 . C . PASS END=145528001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,84,255:22,0 chr1 145528002 . G . PASS END=145528014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,713:0,57,255:19,0 chr1 145528015 . C . PASS END=145528019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 145528020 . G . PASS END=145528037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 145528254 . G . PASS END=145528345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,99,1438:0,110,255:40,0 chr1 145528570 . G . PASS END=145528573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 145528574 . G . PASS END=145528574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 145528575 . T . PASS END=145528661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1158:0,83,255:36,0 chr1 145528662 . A . PASS END=145528684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 145530267 . G . PASS END=145530269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 145530270 . G . PASS END=145530273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 145530274 . A . PASS END=145530278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 145530279 . A . PASS END=145530279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:25,0 chr1 145530280 . C . PASS END=145530291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 145530292 . C . PASS END=145530295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,1008:0,78,255:26,0 chr1 145530296 . G . PASS END=145530340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1036:0,83,255:32,0 chr1 145530341 . A . PASS END=145530341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:29,0 chr1 145530342 . C . PASS END=145530356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 145530357 . T . PASS END=145530357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 145530358 . G . PASS END=145530359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 145530360 . T . PASS END=145530360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr1 145530361 . A . PASS END=145530368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 145530369 . T . PASS END=145530369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 145530370 . G . PASS END=145530375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 145530376 . T . PASS END=145530394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,71,255:26,0 chr1 145530878 . G . PASS END=145531026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:39:0,111,1665:0,117,255:40,0 chr1 145532115 . C . PASS END=145532118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1405:0,117,255:39,0 chr1 145532119 . G . PASS END=145532119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1305:0,51,255:38,0 chr1 145532120 . A . PASS END=145532121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:38,0 chr1 145532122 . G . PASS END=145532265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:38:0,96,1440:0,96,255:40,0 chr1 145532457 . G . PASS END=145532469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:37,0 chr1 145532470 . A . PASS END=145532470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1335:0,70,255:34,0 chr1 145532471 . C . PASS END=145532511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,104,1457:0,104,255:40,0 chr1 145532512 . T . PASS END=145532548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,126,255:40,0 chr1 145532549 . T C, 221.10 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,40,0:0,18,0:171:259,174,0,2206,174,2206:255,177,0:0,0:2.2110e+02,1.7110e+02,0.0000e+00,4.5000e+02,2.0587e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,31:0,0,19,39 chr1 145532550 . T . PASS END=145532586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,149,255:40,0 chr1 145532587 . T . PASS END=145532622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,108,1500:0,116,255:40,0 chr1 145532757 . G . PASS END=145532830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,117,1755:0,138,255:40,0 chr1 145533055 . G . PASS END=145533062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 145533063 . T . PASS END=145533063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:15,0 chr1 145533064 . C . PASS END=145533081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:18,0 chr1 145533082 . G . PASS END=145533082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 145533083 . C . PASS END=145533083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 145533084 . C . PASS END=145533085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:22,0 chr1 145533086 . A . PASS END=145533086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,696:0,11,255:20,0 chr1 145533087 . T . PASS END=145533095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,748:0,66,255:23,0 chr1 145533096 . A . PASS END=145533096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 145533097 . G . PASS END=145533137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,917:0,62,255:26,0 chr1 145533138 . C . PASS END=145533154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 145533155 . A . PASS END=145533155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 145533156 . A . PASS END=145533166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,884:0,72,255:24,0 chr1 145533167 . C . PASS END=145533167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 145533168 . C . PASS END=145533171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 145533172 . G . PASS END=145533174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:23:0,54,810:0,55,255:18,0 chr1 145533175 . T C, 22.31 PASS DP=23;MQ=250.00;MQRankSum=3.536;ReadPosRankSum=1.855;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,6,0:0.261,0.000:23:8,2,0:9,4,0:22:57,0,50,215,605,820:163,0,255:12,0:2.2315e+01,2.5582e-02,5.3026e+01,2.1462e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,0,6:8,9,4,2 chr1 145533176 . T . PASS END=145533194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 145533195 . C . PASS END=145533196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 145533197 . T . PASS END=145533199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 145533412 . G . PASS END=145533412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 145533413 . T . PASS END=145533413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 145533414 . T . PASS END=145533418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1042:0,90,255:30,0 chr1 145533419 . T . PASS END=145533419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 145533420 . G . PASS END=145533421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 145533422 . T . PASS END=145533422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 145533423 . T . PASS END=145533427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 145533428 . C . PASS END=145533428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 145533429 . A . PASS END=145533431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr1 145533432 . C . PASS END=145533432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 145533433 . T . PASS END=145533434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1066:0,93,255:31,0 chr1 145533435 . T . PASS END=145533435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 145533436 . T . PASS END=145533437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 145533438 . C . PASS END=145533438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 145533439 . G . PASS END=145533450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:32,0 chr1 145533451 . G . PASS END=145533451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:29,0 chr1 145533452 . C . PASS END=145533457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 145533458 . T . PASS END=145533458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 145533459 . C . PASS END=145533481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1083:0,96,255:32,0 chr1 145533482 . A . PASS END=145533482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:28,0 chr1 145533483 . C . PASS END=145533512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1094:0,80,255:32,0 chr1 145533513 . A . PASS END=145533513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 145533514 . A . PASS END=145533520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145533521 . T . PASS END=145533542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:25,0 chr1 145533543 . A . PASS END=145533560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:19,0 chr1 145533798 . A . PASS END=145533941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:34:0,86,1154:0,86,255:40,0 chr1 145534083 . C . PASS END=145534089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 145534090 . T . PASS END=145534090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr1 145534091 . G . PASS END=145534091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 145534092 . C . PASS END=145534111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1147:0,90,255:31,0 chr1 145534112 . T . PASS END=145534112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr1 145534113 . C . PASS END=145534138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:32:0,87,1249:0,89,255:36,0 chr1 145534139 . G . PASS END=145534139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 145534140 . T . PASS END=145534269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1206:0,96,255:40,0 chr1 145534270 . G . PASS END=145534286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 145534889 . A . PASS END=145535005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1215:0,82,255:40,0 chr1 145535006 . G . PASS END=145535019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:25,0 chr1 145535735 . C . PASS END=145535787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,746:0,63,255:24,0 chr1 145535788 . T . PASS END=145535788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 145535789 . C . PASS END=145535790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 145535791 . G . PASS END=145535791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 145535792 . T . PASS END=145535804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 145535805 . G . PASS END=145535805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 145535806 . A . PASS END=145535859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 145535860 . A . PASS END=145535860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 145535861 . A . PASS END=145535865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 145535866 . C . PASS END=145535873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,720:0,65,255:18,0 chr1 145535874 . A . PASS END=145535882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 145535883 . C . PASS END=145535883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 145535884 . G . PASS END=145535884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 145535885 . C . PASS END=145535886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 145535887 . G . PASS END=145535887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145535888 . G . PASS END=145535888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:19,0 chr1 145535889 . G . PASS END=145535896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145535897 . A . PASS END=145535898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 145535899 . T . PASS END=145535899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 145535900 . C . PASS END=145535900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 145535901 . T . PASS END=145535901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr1 145535998 . A . PASS END=145535998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:25,0 chr1 145535999 . C . PASS END=145536000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 145536001 . T . PASS END=145536001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,919:0,56,255:27,0 chr1 145536002 . G . PASS END=145536002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145536003 . A . PASS END=145536005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 145536006 . T . PASS END=145536009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145536010 . C . PASS END=145536010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 145536011 . C . PASS END=145536012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 145536013 . C . PASS END=145536013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 145536014 . A . PASS END=145536015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145536016 . C . PASS END=145536017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 145536018 . C . PASS END=145536018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145536019 . T . PASS END=145536019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:27,0 chr1 145536020 . G . PASS END=145536020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 145536021 . G . PASS END=145536026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1031:0,71,255:27,0 chr1 145536027 . T . PASS END=145536059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1088:0,80,255:32,0 chr1 145536060 . T . PASS END=145536060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:30,0 chr1 145536061 . C . PASS END=145536075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1172:0,83,255:30,0 chr1 145536076 . C . PASS END=145536076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 145536077 . C . PASS END=145536082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1178:0,93,255:31,0 chr1 145536083 . G . PASS END=145536083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 145536084 . A . PASS END=145536094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr1 145536095 . C . PASS END=145536105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:24,0 chr1 145536106 . A . PASS END=145536106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 145536107 . T . PASS END=145536130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 145536131 . C . PASS END=145536131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 145536132 . C . PASS END=145536133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 145536134 . T . PASS END=145536134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 145536135 . G . PASS END=145536135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 145536136 . T . PASS END=145536136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 145536137 . G . PASS END=145536137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 145536138 . C . PASS END=145536140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:17,0 chr1 145536853 . G . PASS END=145536966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,101,1346:0,101,255:40,0 chr1 145537176 . G . PASS END=145537295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:50:0,117,1779:0,117,255:40,0 chr1 145537423 . G . PASS END=145537551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:40:0,87,1242:0,87,255:40,0 chr1 145537552 . T . PASS END=145537552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1006:0,53,255:33,0 chr1 145537553 . C . PASS END=145537564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1344:0,81,255:37,0 chr1 145537737 . A . PASS END=145537829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:35:0,90,1343:0,97,255:40,0 chr1 145537989 . G . PASS END=145538065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:88:41:0,88,1312:0,88,255:40,0 chr1 145538218 . T . PASS END=145538307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:42:0,93,1358:0,93,255:40,0 chr1 145538724 . T . PASS END=145538808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,101,1388:0,101,255:40,0 chr1 145538980 . G . PASS END=145539011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:42:0,96,1520:0,96,255:40,0 chr1 145539012 . C . PASS END=145539012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,7:50:34:50:0,34,1408:0,34,255:40,0 chr1 145539013 . C . PASS END=145539081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:31:0,81,1215:0,93,255:40,0 chr1 145539082 . A . PASS END=145539083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 145539084 . C . PASS END=145539086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145539087 . T . PASS END=145539093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,74,255:26,0 chr1 145539365 . G . PASS END=145539445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:41:0,90,1507:0,90,255:40,0 chr1 145539683 . A . PASS END=145539796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:51:0,120,1800:0,143,255:40,0 chr1 145541441 . G . PASS END=145541450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1116:0,87,255:29,0 chr1 145541451 . A . PASS END=145541453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1072:0,54,255:30,0 chr1 145541454 . C . PASS END=145541526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:33:0,96,1235:0,99,255:37,0 chr1 145541527 . T . PASS END=145541527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1031:0,74,255:32,0 chr1 145541528 . T . PASS END=145541532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr1 145541533 . T . PASS END=145541536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,102,255:21,0 chr1 145541802 . A . PASS END=145541915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:37:0,107,1426:0,107,255:40,0 chr1 145542213 . C . PASS END=145542278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,132,255:40,0 chr1 145549317 . A . PASS END=145549321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr1 145549322 . G . PASS END=145549329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 145549330 . T . PASS END=145549330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 145549331 . C . PASS END=145549331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 145549332 . T . PASS END=145549332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 145549333 . C . PASS END=145549355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,869:0,62,255:26,0 chr1 145555692 . G . PASS END=145555697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 145555698 . A . PASS END=145555698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 145555699 . G . PASS END=145555721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 145555722 . C . PASS END=145555728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 145555729 . A . PASS END=145555729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 145555730 . G . PASS END=145555740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:22,0 chr1 145555741 . G . PASS END=145555741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 145555742 . G . PASS END=145555746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 145555747 . A . PASS END=145555747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 145555748 . T . PASS END=145555779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,900:0,64,255:25,0 chr1 145555780 . A . PASS END=145555780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 145555781 . A . PASS END=145555814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr1 145555815 . C . PASS END=145555822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:16,0 chr1 145556601 . G . PASS END=145556687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,99,1485:0,107,255:40,0 chr1 145556688 . T . PASS END=145556688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:33,0 chr1 145556689 . G . PASS END=145556689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 145557048 . G . PASS END=145557112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,164,255:40,0 chr1 145558208 . C . PASS END=145558265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:86:41:0,86,1607:0,86,255:40,0 chr1 145558442 . C . PASS END=145558512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,106,1423:0,106,255:40,0 chr1 145558835 . G . PASS END=145558858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 145558859 . G . PASS END=145558859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 145558860 . C . PASS END=145558861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 145558862 . T . PASS END=145558886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,969:0,65,255:26,0 chr1 145558887 . G . PASS END=145558889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145558890 . C . PASS END=145558897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:26,0 chr1 145558898 . C . PASS END=145558904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 145558905 . G . PASS END=145558905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 145558906 . A . PASS END=145558913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 145558914 . G . PASS END=145558914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 145558915 . A . PASS END=145558920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 145558921 . T . PASS END=145558927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 145558928 . G . PASS END=145558933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 145558934 . A . PASS END=145558941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 145560075 . A . PASS END=145560084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 145560085 . A . PASS END=145560086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 145560087 . C . PASS END=145560094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 145560095 . G . PASS END=145560107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1080:0,84,255:31,0 chr1 145560108 . T . PASS END=145560108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 145560109 . G . PASS END=145560195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,87,255:39,0 chr1 145560196 . C . PASS END=145560199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 145560200 . C . PASS END=145560200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 145560201 . A . PASS END=145560204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 145560205 . G . PASS END=145560208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 145560209 . A . PASS END=145560210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr1 145560211 . G . PASS END=145560211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145560212 . C . PASS END=145560212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr1 145560213 . A . PASS END=145560233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:26,0 chr1 145560234 . G . PASS END=145560234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 145560235 . G . PASS END=145560235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 145560236 . C . PASS END=145560236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 145560237 . C . PASS END=145560246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 145560247 . C . PASS END=145560259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr1 145560889 . G . PASS END=145560926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:42:0,88,1488:0,88,255:40,0 chr1 145561096 . G . PASS END=145561097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 145561098 . C . PASS END=145561128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr1 145561129 . C . PASS END=145561140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 145561141 . T . PASS END=145561142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 145561143 . G . PASS END=145561189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:29:0,87,1116:0,87,255:39,0 chr1 145561190 . C . PASS END=145561190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:34,0 chr1 145561191 . G . PASS END=145561354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:36:0,81,1215:0,102,255:40,0 chr1 145561355 . T . PASS END=145561375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:26:0,74,955:0,74,255:26,0 chr1 145561376 . C . PASS END=145561385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 145561386 . A . PASS END=145561387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 145561388 . G . PASS END=145561391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 145561392 . T . PASS END=145561393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 145561394 . G . PASS END=145561407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:28,0 chr1 145561408 . G . PASS END=145561409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 145561410 . G . PASS END=145561473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1241:0,93,255:35,0 chr1 145561474 . C . PASS END=145561474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 145561475 . A . PASS END=145561542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1049:0,87,255:35,0 chr1 145561543 . A . PASS END=145561543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 145561544 . A . PASS END=145561553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 145561554 . T . PASS END=145561556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:21,0 chr1 145561557 . A . PASS END=145561566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:23,0 chr1 145561567 . A . PASS END=145561576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 145561577 . C . PASS END=145561579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 145561580 . A . PASS END=145561588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 145561589 . G . PASS END=145561593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145561594 . C T, 47.13 PASS DP=22;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=0.616;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,8,0:0.381,0.000:21:5,4,0:8,4,0:46:82,0,50,257,465,722:225,0,255:12,0:4.7129e+01,1.0587e-04,5.3000e+01,2.5745e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,4,4:5,8,6,2 chr1 145561595 . C . PASS END=145561606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 145561607 . C . PASS END=145561607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 145561608 . G . PASS END=145561620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,848:0,61,255:26,0 chr1 145561621 . A . PASS END=145561621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:25,0 chr1 145561622 . G . PASS END=145561631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 145561632 . A . PASS END=145561665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr1 145561666 . T . PASS END=145561666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:20,0 chr1 145561667 . T . PASS END=145561667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 145561668 . T . PASS END=145561701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:23,0 chr1 145561702 . C . PASS END=145561742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 145561743 . C . PASS END=145561745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 145561746 . A . PASS END=145561754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 145561755 . A . PASS END=145561770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:15:0,35,540:0,35,255:13,0 chr1 145561771 . G . PASS END=145561777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145561778 . A . PASS END=145561778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145561779 . C . PASS END=145561779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145561780 . C . PASS END=145561783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145561784 . T . PASS END=145561784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 145561785 . T . PASS END=145561793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 145561794 . A . PASS END=145561794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr1 145561795 . C . PASS END=145561810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 145561811 . C . PASS END=145561812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145561813 . G . PASS END=145561813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 145561814 . C . PASS END=145561827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 145561828 . A . PASS END=145561828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 145561829 . A . PASS END=145561832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 145561833 . T . PASS END=145561833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 145561834 . G . PASS END=145561839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 145561840 . C . PASS END=145561842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145561843 . G . PASS END=145561843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 145561844 . G . PASS END=145561844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145561845 . G . PASS END=145561845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 145561846 . G . PASS END=145561847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145561848 . T . PASS END=145561850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145561851 . G . PASS END=145561858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 145561859 . C . PASS END=145561860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 145561861 . G . PASS END=145561891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:17,0 chr1 145561892 . C . PASS END=145561892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 145561893 . T . PASS END=145561910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,545:0,48,255:16,0 chr1 145561911 . C . PASS END=145561919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 145561920 . G . PASS END=145561920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145561921 . A . PASS END=145561921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 145561922 . T . PASS END=145561949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,462:0,45,255:16,0 chr1 145561950 . A . PASS END=145561953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:32:16:0,32,495:0,32,255:13,0 chr1 145561954 . C . PASS END=145561958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 145561959 . A . PASS END=145561959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:13,0 chr1 145561960 . T . PASS END=145561978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:17,0 chr1 145561979 . A . PASS END=145561979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 145561980 . G . PASS END=145561984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 145561985 . A . PASS END=145561985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 145561986 . A . PASS END=145561995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr1 145561996 . C . PASS END=145561996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 145561997 . C . PASS END=145561999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 145562000 . C . PASS END=145562020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 145562021 . C . PASS END=145562025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 145562026 . A . PASS END=145562026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 145562027 . A . PASS END=145562029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 145562030 . C . PASS END=145562031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 145562032 . G . PASS END=145562034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 145562035 . C . PASS END=145562035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 145562036 . C . PASS END=145562047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 145562048 . A . PASS END=145562048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:14,0 chr1 145562049 . A . PASS END=145562075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,527:0,45,255:17,0 chr1 145562076 . T . PASS END=145562076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 145562077 . C . PASS END=145562092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,629:0,45,255:17,0 chr1 145562093 . A . PASS END=145562093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,44,255:13,0 chr1 145562094 . G . PASS END=145562104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 145562105 . C . PASS END=145562108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145562109 . T . PASS END=145562109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 145562110 . G . PASS END=145562135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,443:0,36,255:13,0 chr1 145562136 . G . PASS END=145562138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 145562139 . A . PASS END=145562161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 145562162 . T . PASS END=145562162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 145562163 . G . PASS END=145562168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 145562169 . A . PASS END=145562173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562174 . G . PASS END=145562174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 145562175 . A . PASS END=145562175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562176 . C . PASS END=145562177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 145562178 . G . PASS END=145562178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 145562179 . A . PASS END=145562189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,466:0,39,255:13,0 chr1 145562190 . C . PASS END=145562190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 145562191 . T . PASS END=145562199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,480:0,39,255:13,0 chr1 145562200 . G . PASS END=145562207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562208 . G . PASS END=145562210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 145562211 . G . PASS END=145562213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562214 . G . PASS END=145562214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 145562215 . G . PASS END=145562217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562218 . C . PASS END=145562220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 145562221 . G . PASS END=145562229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 145562230 . A . PASS END=145562230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 145562231 . G . PASS END=145562251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr1 145562252 . C . PASS END=145562254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 145562255 . T . PASS END=145562255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 145562256 . G . PASS END=145562257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 145562258 . G . PASS END=145562292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:24,0 chr1 145562293 . G C, 49.64 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=1.854;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,11,0:0.458,0.000:24:7,4,0:6,7,0:48:84,0,50,393,465,859:255,0,255:13,0:4.9640e+01,6.8857e-05,5.3000e+01,3.9343e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,6,5:7,6,3,8 chr1 145562294 . A . PASS END=145562321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,923:0,72,255:25,0 chr1 145562322 . A . PASS END=145562322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 145562323 . C . PASS END=145562345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,925:0,68,255:26,0 chr1 145562346 . T . PASS END=145562346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 145562347 . G . PASS END=145562366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,834:0,75,255:26,0 chr1 145562367 . G . PASS END=145562367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,776:0,45,255:23,0 chr1 145562368 . G . LowGQ END=145562368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,9:26:0:26:0,0,444:93,0,255:16,0 chr1 145562369 . C . PASS END=145562391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 145562392 . C . PASS END=145562405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 145562406 . C . PASS END=145562441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:17,0 chr1 145562442 . A . PASS END=145562444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 145562445 . C . PASS END=145562446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr1 145562447 . T . PASS END=145562451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 145562452 . G . PASS END=145562464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:18,0 chr1 145562465 . C . PASS END=145562465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 145562466 . A . PASS END=145562473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 145562474 . A . PASS END=145562474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 145562475 . A . PASS END=145562485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 145562486 . C . PASS END=145562486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 145562487 . C . PASS END=145562488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 145562489 . T . PASS END=145562489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 145562490 . G . PASS END=145562494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 145562495 . A . PASS END=145562495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 145562496 . G . PASS END=145562499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562500 . C . PASS END=145562500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 145562501 . G . PASS END=145562503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 145562504 . C . PASS END=145562504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:12,0 chr1 145562505 . C . PASS END=145562508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562509 . A . PASS END=145562511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 145562512 . A . PASS END=145562512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 145562513 . G . PASS END=145562514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 145562515 . A . PASS END=145562515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 145562516 . C . PASS END=145562519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 145562520 . G . PASS END=145562521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562522 . T . PASS END=145562534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 145562535 . G . PASS END=145562539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 145562540 . C . PASS END=145562591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 145562592 . C . PASS END=145562593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 145562594 . T . PASS END=145562595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145562596 . T . PASS END=145562597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 145562598 . C . PASS END=145562599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145562600 . C . PASS END=145562600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145562601 . G . PASS END=145562602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145562603 . G . PASS END=145562611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 145562612 . C . PASS END=145562612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 145562613 . A . PASS END=145562638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 145562639 . C . PASS END=145562647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 145562648 . T . PASS END=145562648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 145562649 . G . PASS END=145562653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 145562654 . C . PASS END=145562749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,582:0,45,255:19,0 chr1 145562750 . T . PASS END=145562761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 145562762 . C . PASS END=145562786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:19,0 chr1 145562787 . G . PASS END=145562800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr1 145562801 . C . PASS END=145562804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 145562805 . C . PASS END=145562811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 145562812 . C . PASS END=145562843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,737:0,57,255:19,0 chr1 145562844 . C . PASS END=145562879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 145562880 . G . PASS END=145562880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 145562881 . T C, 106.74 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,12,0:0,8,0:57:145,60,0,746,60,746:255,60,0:0,0:1.0674e+02,5.6736e+01,9.3190e-06,4.5000e+02,9.1506e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,8:0,0,10,10 chr1 145562882 . T . PASS END=145562886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 145562887 . A . PASS END=145562888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 145562889 . G . PASS END=145562891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 145562892 . T . PASS END=145562892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 145562893 . A . PASS END=145562894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 145562895 . T . PASS END=145562895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 145562896 . A . PASS END=145562909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:22,0 chr1 145562910 . A . PASS END=145562910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 145562911 . G . PASS END=145562916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,829:0,66,255:22,0 chr1 145562917 . C . PASS END=145562918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 145562919 . G . PASS END=145562926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 145562927 . A . PASS END=145562927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 145562928 . G . PASS END=145562929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 145562930 . C . PASS END=145562948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 145562949 . C . PASS END=145562962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 145562963 . T . PASS END=145562963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr1 145562964 . G . PASS END=145562968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 145562969 . C . PASS END=145563039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,770:0,63,255:26,0 chr1 145563040 . G . PASS END=145563042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 145563043 . C . PASS END=145563085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,808:0,61,255:26,0 chr1 145563086 . A . PASS END=145563095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr1 145563096 . C . PASS END=145563099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 145566686 . A . PASS END=145566775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:34:0,96,1346:0,101,255:40,0 chr1 145567030 . G . PASS END=145567095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,111,1665:0,122,255:40,0 chr1 145567694 . G . PASS END=145567756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:41:0,96,1572:0,96,255:40,0 chr1 145576079 . A . PASS END=145576079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 145576080 . T . PASS END=145576094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 145576095 . A . PASS END=145576095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 145576096 . A . PASS END=145576102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr1 145577724 . A . PASS END=145577753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,120,255:40,0 chr1 145578062 . C . PASS END=145578067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,962:0,78,255:26,0 chr1 145578068 . G . PASS END=145578071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145578072 . T . PASS END=145578074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 145578075 . G . PASS END=145578289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1186:0,80,255:40,0 chr1 145578290 . T . PASS END=145578308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:22,0 chr1 145578309 . G . PASS END=145578312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 145578313 . T . PASS END=145578313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 145578314 . C . PASS END=145578330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,50,255:18,0 chr1 145578331 . A . PASS END=145578331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 145578332 . A . PASS END=145578345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 145578346 . T . PASS END=145578346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,519:0,9,255:13,0 chr1 145578347 . G . PASS END=145578388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,44,255:19,0 chr1 145578389 . C . PASS END=145578390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 145578391 . T . PASS END=145578393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 145578394 . G . PASS END=145578398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 145578399 . A . PASS END=145578478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1112:0,80,255:34,0 chr1 145578479 . G . PASS END=145578479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:30,0 chr1 145578637 . C . PASS END=145578721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:36:0,84,1194:0,84,255:40,0 chr1 145578950 . A . PASS END=145579000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,144,255:40,0 chr1 145579242 . G . PASS END=145579246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 145579247 . G . PASS END=145579247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145579248 . T . PASS END=145579264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,878:0,64,255:25,0 chr1 145579265 . G . PASS END=145579265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 145579266 . C . PASS END=145579279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,785:0,69,255:25,0 chr1 145579280 . A . PASS END=145579280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr1 145579281 . T . PASS END=145579291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,961:0,65,255:26,0 chr1 145579292 . A . PASS END=145579292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,763:0,48,255:23,0 chr1 145579293 . C . PASS END=145579294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 145579295 . T . PASS END=145579295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:23,0 chr1 145579296 . C . PASS END=145579296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 145579297 . T . PASS END=145579297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,793:0,39,255:23,0 chr1 145579298 . T . PASS END=145579298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 145579299 . T . PASS END=145579299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:22,0 chr1 145579300 . G . PASS END=145579302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 145579303 . A . PASS END=145579304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:21,0 chr1 145579305 . G . PASS END=145579306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:20,0 chr1 145579307 . T . PASS END=145579321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:30:13:0,30,450:0,33,255:13,0 chr1 145579322 . G . PASS END=145579322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:10,0 chr1 145579323 . C . PASS END=145579324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,380:0,33,255:11,0 chr1 145579325 . C . PASS END=145579325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 145579326 . C . PASS END=145579328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 145579329 . G . PASS END=145579329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 145579330 . C . LowGQ END=145579330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,294:22,0,255:9,0 chr1 145579331 . C . PASS END=145579332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 145580188 . G . PASS END=145580195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 145580196 . T . PASS END=145580196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 145580197 . C . PASS END=145580202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 145580203 . A . PASS END=145580235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,488:0,42,255:19,0 chr1 145580236 . C . PASS END=145580248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 145580249 . T . PASS END=145580249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,711:0,33,255:23,0 chr1 145580250 . C . PASS END=145580259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,833:0,72,255:24,0 chr1 145580260 . G . PASS END=145580260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 145580261 . C . PASS END=145580286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,840:0,62,255:25,0 chr1 145580287 . A . PASS END=145580288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 145580289 . C . PASS END=145580289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 145580290 . A . PASS END=145580290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 145580291 . T . PASS END=145580322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 145580505 . A . PASS END=145580610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:32:0,84,1180:0,93,255:40,0 chr1 145581182 . T . PASS END=145581255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,107,1759:0,107,255:40,0 chr1 145581404 . C . PASS END=145581414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1164:0,83,255:31,0 chr1 145581415 . G . PASS END=145581415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 145581416 . C . PASS END=145581521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1260:0,93,255:40,0 chr1 145581522 . T . PASS END=145581543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:25,0 chr1 145581544 . T . PASS END=145581544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 145581545 . G . PASS END=145581547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 145581548 . T . PASS END=145581548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 145581549 . C . PASS END=145581549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 145581550 . T . PASS END=145581550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,768:0,42,255:20,0 chr1 145581551 . C . PASS END=145581552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 145581553 . T . PASS END=145581553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 145581554 . A . PASS END=145581555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 145581556 . C . PASS END=145581564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,56,255:17,0 chr1 145583915 . T . PASS END=145583915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,975:0,79,255:30,0 chr1 145583916 . T . PASS END=145583920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1004:0,90,255:30,0 chr1 145583921 . T . PASS END=145583921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:29,0 chr1 145583922 . A . PASS END=145583923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 145583924 . G . PASS END=145583924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:27,0 chr1 145583925 . G . PASS END=145584020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:30:0,81,1130:0,82,255:40,0 chr1 145584021 . T . PASS END=145584024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 145584025 . C . PASS END=145584025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 145584026 . C . PASS END=145584048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:26:0,66,990:0,71,255:26,0 chr1 145584129 . G . PASS END=145584277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1260:0,89,255:40,0 chr1 145584278 . G . PASS END=145584278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:27,0 chr1 145584279 . C . PASS END=145584280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 145584281 . C . PASS END=145584292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:26:0,69,1035:0,70,255:25,0 chr1 145584293 . A . PASS END=145584293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 145584294 . A . PASS END=145584294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:21,0 chr1 145584295 . A . PASS END=145584297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:22,0 chr1 145584482 . A . PASS END=145584500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,853:0,66,255:26,0 chr1 145584501 . C . PASS END=145584510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 145584511 . C . PASS END=145584512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 145584513 . G . PASS END=145584556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1172:0,93,255:33,0 chr1 145584557 . G . PASS END=145584557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 145584558 . T . PASS END=145584586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1209:0,87,255:33,0 chr1 145584587 . T . PASS END=145584615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,892:0,72,255:26,0 chr1 145584799 . G . PASS END=145584836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:71:0,120,1800:0,205,255:40,0 chr1 145585356 . C . PASS END=145585378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr1 145585379 . C . PASS END=145585379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 145585380 . T . PASS END=145585404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 145585405 . G . PASS END=145585409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145585410 . T . PASS END=145585410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 145585411 . T . PASS END=145585415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 145585416 . C . PASS END=145585416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,421:0,11,255:11,0 chr1 145585417 . A . PASS END=145585419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 145585420 . A . PASS END=145585427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 145585428 . A . PASS END=145585428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 145585429 . C . PASS END=145585429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 145585430 . C . PASS END=145585430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 145585431 . C . PASS END=145585432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 145585433 . T . PASS END=145585433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr1 145585434 . T . PASS END=145585434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145585435 . C . PASS END=145585435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 145585436 . T . PASS END=145585436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145585437 . C . PASS END=145585437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr1 145585438 . A . PASS END=145585442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145585443 . C . PASS END=145585444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145585445 . G . PASS END=145585445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:6,0 chr1 145585446 . G . PASS END=145585472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,304:0,27,255:9,0 chr1 145585473 . T . PASS END=145585473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 145585474 . C . PASS END=145585477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 145585478 . C . PASS END=145585478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 145585479 . T . PASS END=145585479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 145585480 . G A, 0.02 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:5,1,0:3,0,0:23:12,0,50,36,278,314:25,0,255:8,0:2.1300e-02,2.3106e+01,7.6106e+01,5.8866e+01,3.3603e+02,3.4002e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,0,1:7,1,0,1 chr1 145585481 . C . PASS END=145585485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 145585486 . C . PASS END=145585487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 145585488 . A . PASS END=145585488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 145585489 . C . PASS END=145585489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 145585490 . T . PASS END=145585490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 145585491 . C . PASS END=145585495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 145585496 . G . PASS END=145585496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 145585497 . C . PASS END=145585501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 145585502 . T . PASS END=145585502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 145585503 . C . PASS END=145585504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 145585505 . T . PASS END=145585505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 145585506 . G . PASS END=145585511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 145585512 . G . PASS END=145585517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 145585518 . A . PASS END=145585520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 145585521 . A . PASS END=145585521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 145585522 . T . PASS END=145585557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 145585558 . G . PASS END=145585558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 145585559 . A . PASS END=145585560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:8,0 chr1 145585561 . G . PASS END=145585570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 145585571 . C . PASS END=145585622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr1 145586589 . T . PASS END=145586591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 145586592 . C . PASS END=145586592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 145586593 . T . PASS END=145586603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1001:0,81,255:29,0 chr1 145586604 . C . PASS END=145586607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1086:0,74,255:27,0 chr1 145586608 . T . PASS END=145586609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145586610 . T . PASS END=145586613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1124:0,77,255:27,0 chr1 145586614 . G . PASS END=145586617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 145586618 . G . PASS END=145586618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:29,0 chr1 145586619 . A . PASS END=145586645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 145586646 . T . PASS END=145586646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:30,0 chr1 145586647 . G . PASS END=145586653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1178:0,83,255:32,0 chr1 145586654 . G . PASS END=145586654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1200:0,58,255:30,0 chr1 145586655 . G . PASS END=145586680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1155:0,80,255:33,0 chr1 145586681 . G . PASS END=145586691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1035:0,77,255:26,0 chr1 145586804 . C . PASS END=145586832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,128,255:40,0 chr1 145586833 . G . PASS END=145586833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:76:49:0,76,1688:0,76,255:40,0 chr1 145586834 . G . PASS END=145586903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:42:0,81,1215:0,110,255:40,0 chr1 145586904 . A . PASS END=145586904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 145586905 . C . PASS END=145586918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,89,255:30,0 chr1 145586919 . G . PASS END=145586919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 145586920 . A . PASS END=145586922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 145586923 . T . PASS END=145586951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr1 145586952 . C . PASS END=145586956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr1 145587349 . A . PASS END=145587485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,120,1800:0,132,255:40,0 chr1 145587513 . T . PASS END=145587551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,111,1561:0,111,255:40,0 chr1 145587720 . C . PASS END=145587813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:85:40:0,85,1402:0,85,255:40,0 chr1 145587814 . G . PASS END=145587818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1239:0,86,255:30,0 chr1 145588298 . T . PASS END=145588470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:39:0,93,1404:0,93,255:40,0 chr1 145588610 . C . PASS END=145588635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1504:0,107,255:40,0 chr1 145588872 . C . PASS END=145588876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,951:0,81,255:29,0 chr1 145588877 . G . PASS END=145588877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,859:0,70,255:28,0 chr1 145588878 . G . PASS END=145588880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,967:0,87,255:29,0 chr1 145588881 . C . PASS END=145588881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 145588882 . C . PASS END=145588883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145588884 . A . PASS END=145588884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 145588885 . G . PASS END=145588885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145588886 . A . PASS END=145588886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 145588887 . G . PASS END=145588891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 145588892 . G . PASS END=145588892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 145588893 . G . PASS END=145588896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145588897 . A . PASS END=145588898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 145588899 . C . PASS END=145588968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1355:0,81,255:39,0 chr1 145588969 . C . PASS END=145588969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:38,0 chr1 145588970 . A . PASS END=145588991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:36:0,87,1324:0,87,255:39,0 chr1 145588992 . G . PASS END=145588992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:29,0 chr1 145588993 . C . PASS END=145588997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:30,0 chr1 145588998 . C . PASS END=145588999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 145589000 . G . PASS END=145589006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,86,255:28,0 chr1 145589007 . G . PASS END=145589034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,908:0,60,255:26,0 chr1 145589035 . A . PASS END=145589051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:17,0 chr1 145589052 . G . PASS END=145589052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,0 chr1 145589053 . T . PASS END=145589055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 145589236 . C . PASS END=145589236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 145589237 . T . PASS END=145589240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 145589241 . G . PASS END=145589259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 145589260 . G . PASS END=145589260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 145589261 . C . PASS END=145589261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 145589262 . C . PASS END=145589262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 145589263 . T . PASS END=145589296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 145589297 . C . PASS END=145589297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 145589298 . G . PASS END=145589298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 145589299 . C . PASS END=145589299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr1 145589300 . T . PASS END=145589311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,558:0,48,255:16,0 chr1 145589312 . T . PASS END=145589312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 145589313 . G . PASS END=145589321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 145589322 . A . PASS END=145589322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 145589323 . C . PASS END=145589323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 145589324 . G . PASS END=145589331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 145589332 . C . PASS END=145589332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 145589333 . C . PASS END=145589333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 145589334 . C . PASS END=145589334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 145589335 . T . PASS END=145589347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 145589348 . A . PASS END=145589348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 145589349 . G . PASS END=145589350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 145589351 . A . PASS END=145589351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 145589352 . G . PASS END=145589355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 145589356 . A . PASS END=145589356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 145589357 . C . PASS END=145589373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 145589374 . G . PASS END=145589383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 145589384 . T . LowGQ END=145589384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,263:17,0,255:6,0 chr1 145589385 . C . PASS END=145589398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 145589399 . A . PASS END=145589408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:9:0,10,225:0,10,255:6,0 chr1 145589409 . G . PASS END=145589409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 145589410 . C . PASS END=145589427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,133:5,0 chr1 145592690 . T . PASS END=145592699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,972:0,81,255:33,0 chr1 145592700 . T . PASS END=145592700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr1 145592701 . T . PASS END=145592721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1219:0,88,255:38,0 chr1 145592722 . A . PASS END=145592722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1259:0,75,255:37,0 chr1 145592723 . C . PASS END=145592725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1335:0,84,255:38,0 chr1 145592726 . C . PASS END=145592726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr1 145592727 . A . PASS END=145592771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,107,1450:0,107,255:40,0 chr1 145594039 . T . PASS END=145594172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1142:0,85,255:40,0 chr1 145594173 . T . PASS END=145594174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 145594175 . T . PASS END=145594175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145594176 . T . PASS END=145594186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,950:0,73,255:26,0 chr1 145594187 . G . PASS END=145594187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:23,0 chr1 145594188 . C . PASS END=145594188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 145594945 . T . PASS END=145594994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:94:0,120,1800:0,241,255:40,0 chr1 145595119 . C . PASS END=145595220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:48:0,112,1800:0,112,255:40,0 chr1 145596904 . C . PASS END=145596913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 145596914 . A . PASS END=145596914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 145596915 . T . PASS END=145596915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 145596916 . G . PASS END=145596916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 145596917 . A . PASS END=145596922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1001:0,84,255:29,0 chr1 145596923 . T . PASS END=145596923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 145596924 . C . PASS END=145597054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:29:0,87,1040:0,87,255:40,0 chr1 145597514 . C . PASS END=145597574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,102,1465:0,104,255:40,0 chr1 145598090 . T . PASS END=145598092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 145598244 . T . PASS END=145598295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,137,255:40,0 chr1 145598536 . T . PASS END=145598616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:66:0,120,1800:0,159,255:40,0 chr1 145601530 . C . PASS END=145601622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,105,1520:0,105,255:40,0 chr1 145601748 . C . PASS END=145601823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:39:0,104,1473:0,104,255:40,0 chr1 145601824 . T . PASS END=145601852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:37:0,86,1335:0,86,255:38,0 chr1 145606275 . C . PASS END=145606363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,120,1800:0,122,255:40,0 chr1 145608108 . C . PASS END=145608127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,63,255:26,0 chr1 145608128 . A . PASS END=145608130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 145608131 . A . PASS END=145608131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 145608132 . G . PASS END=145608293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:30:0,81,1141:0,81,255:40,0 chr1 145608404 . C . PASS END=145608659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:33:0,80,1128:0,80,255:40,0 chr1 145609190 . C . PASS END=145609354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:29:0,80,1080:0,80,255:40,0 chr1 145609355 . A . PASS END=145609355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1598:0,75,255:35,0 chr1 145609356 . G . PASS END=145609356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,114,1710:0,147,255:38,0 chr1 145610566 . C . PASS END=145610569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr1 145610570 . T . PASS END=145610570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:30,0 chr1 145610571 . T . PASS END=145610579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr1 145610580 . C . PASS END=145610584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1045:0,60,255:25,0 chr1 145611240 . A . PASS END=145611279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,604:0,48,255:19,0 chr1 145611280 . C . PASS END=145611294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 145611295 . G . PASS END=145611295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 145611296 . G . PASS END=145611314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,761:0,69,255:23,0 chr1 145611315 . A . PASS END=145611315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 145611316 . A . PASS END=145611324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 145611325 . T . PASS END=145611334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 145611335 . A . PASS END=145611335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,707:0,35,255:16,0 chr1 145611336 . C . PASS END=145611341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:18,0 chr1 145646115 . G . PASS END=145646173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:57:0,120,1800:0,170,255:40,0 chr1 145648016 . A . PASS END=145648067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,179,255:40,0 chr1 145650483 . T . PASS END=145650540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,120,1800:0,200,255:40,0 chr1 145663159 . C . PASS END=145663162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 145663163 . G . PASS END=145663164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 145663165 . G . PASS END=145663165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 145663166 . G . PASS END=145663171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 145663172 . T . PASS END=145663172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 145663173 . G . PASS END=145663175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 145663176 . T . PASS END=145663176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 145663177 . C . PASS END=145663195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1074:0,87,255:31,0 chr1 145663196 . A . PASS END=145663196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 145663197 . T . PASS END=145663345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:31:0,86,1227:0,86,255:40,0 chr1 145663346 . A . PASS END=145663346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 145663347 . C . PASS END=145663350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 145663351 . T . PASS END=145663351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:26,0 chr1 145663352 . C . PASS END=145663352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145663353 . T . PASS END=145663353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 145663354 . C . PASS END=145663356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145663357 . G . PASS END=145663358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:27,0 chr1 145663359 . T . PASS END=145663359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,865:0,45,255:24,0 chr1 145663360 . A . PASS END=145663365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,952:0,68,255:25,0 chr1 145663366 . G . PASS END=145663366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:23,0 chr1 145663367 . G . PASS END=145663367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 145682023 . A . PASS END=145682094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:66:0,120,1800:0,182,255:40,0 chr1 145683575 . G . PASS END=145683647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1215:0,83,255:37,0 chr1 145684585 . C . PASS END=145684675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,108,1493:0,110,255:40,0 chr1 145684676 . T . PASS END=145684676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1361:0,74,255:33,0 chr1 145684677 . T . PASS END=145684678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr1 145686976 . A . PASS END=145687091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:36:0,96,1276:0,108,255:40,0 chr1 145688089 . C . PASS END=145688105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,653:0,54,255:19,0 chr1 145688106 . A . PASS END=145688113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 145688114 . A . PASS END=145688114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 145688115 . G . PASS END=145688115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 145688116 . A . PASS END=145688116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 145688117 . G . PASS END=145688119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 145688120 . T . PASS END=145688120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 145688121 . A . PASS END=145688134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,793:0,69,255:26,0 chr1 145688135 . C . PASS END=145688143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 145688144 . A . PASS END=145688155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,925:0,67,255:26,0 chr1 145688156 . C . PASS END=145688173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,968:0,81,255:27,0 chr1 145688174 . A . PASS END=145688196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 145688197 . C . PASS END=145688203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,61,255:19,0 chr1 145688204 . A . PASS END=145688204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 145688205 . C . PASS END=145688220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,613:0,41,255:19,0 chr1 145696593 . T . PASS END=145696600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:75:0,120,1800:0,195,255:40,0 chr1 145698786 . T . PASS END=145698890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:34:0,90,1157:0,90,255:40,0 chr1 145698891 . A . PASS END=145698891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1245:0,75,255:37,0 chr1 145698892 . G . PASS END=145698905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1395:0,101,255:39,0 chr1 145698906 . A . PASS END=145698906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:32,0 chr1 145698907 . A . PASS END=145699090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1260:0,84,255:40,0 chr1 145704017 . C . PASS END=145704050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,837:0,69,255:26,0 chr1 145704051 . G . PASS END=145704081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,987:0,84,255:32,0 chr1 145704082 . C . PASS END=145704082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 145704083 . A . PASS END=145704292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1053:0,80,255:40,0 chr1 145704293 . A . PASS END=145704329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,71,255:25,0 chr1 145704330 . G . PASS END=145704343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,765:0,54,255:18,0 chr1 145706686 . C . PASS END=145706688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 145706689 . C . PASS END=145706690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,814:0,53,255:23,0 chr1 145706691 . G . PASS END=145706698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 145706699 . G . PASS END=145706727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:30,0 chr1 145706728 . C . PASS END=145706728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 145706729 . A . PASS END=145706746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1103:0,87,255:30,0 chr1 145706747 . T . PASS END=145706748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 145706749 . C . PASS END=145706754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 145706755 . G . PASS END=145706758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 145744957 . A . PASS END=145744973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,914:0,72,255:25,0 chr1 145744974 . A . PASS END=145744974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 145744975 . G . PASS END=145744975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 145744976 . A . PASS END=145744977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 145744978 . C . PASS END=145744978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 145744979 . T . PASS END=145744979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 145744980 . G . PASS END=145744982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 145744983 . T . PASS END=145744983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,798:0,28,255:20,0 chr1 145744984 . A . PASS END=145744984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 145744985 . G . PASS END=145744985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 145744986 . C . PASS END=145744986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 145744987 . T . PASS END=145744987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:21,0 chr1 145744988 . C . PASS END=145744988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 145744989 . T . PASS END=145744990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:22,0 chr1 145744991 . C . PASS END=145745002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,870:0,65,255:26,0 chr1 145745003 . T . PASS END=145745004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145745005 . T . PASS END=145745014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 145747042 . A . PASS END=145747049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,937:0,62,255:24,0 chr1 145747050 . T . PASS END=145747050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 145747051 . C . PASS END=145747055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 145747056 . T . PASS END=145747056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 145747057 . T . PASS END=145747069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,870:0,64,255:26,0 chr1 145747070 . A . PASS END=145747076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 145747077 . C . PASS END=145747077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 145747078 . T . PASS END=145747170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1133:0,89,255:39,0 chr1 145747171 . C . PASS END=145747208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 145747209 . C . PASS END=145747218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:20:0,48,720:0,60,255:19,0 chr1 145747219 . A . PASS END=145747239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,450:0,36,255:13,0 chr1 145747240 . A . PASS END=145747250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 145747251 . C . PASS END=145747253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 145748338 . G . PASS END=145748341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 145748342 . T . LowGQ END=145748342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr1 145748343 . G . PASS END=145748349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr1 145748350 . G . PASS END=145748350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 145748351 . T . PASS END=145748353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 145748354 . G . PASS END=145748364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:8,0 chr1 145748365 . A . PASS END=145748365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 145748366 . A . PASS END=145748373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,243:0,24,243:9,0 chr1 145748374 . A . LowGQ END=145748374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,230:6,0,236:7,0 chr1 145748375 . C . PASS END=145748381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 145748382 . A . PASS END=145748382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 145748383 . G . PASS END=145748398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 145748399 . C . PASS END=145748409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 145748410 . G . PASS END=145748410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 145748411 . C . PASS END=145748411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 145748412 . A . PASS END=145748426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr1 145748427 . G . PASS END=145748427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 145748428 . G . PASS END=145748432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 145748433 . G . PASS END=145748460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 145748461 . C . PASS END=145748461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 145748462 . A . PASS END=145748465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:22,0 chr1 145748466 . T . PASS END=145748474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,723:0,63,255:23,0 chr1 145748475 . T . PASS END=145748475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 145748476 . A . PASS END=145748483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 145748484 . T . PASS END=145748484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:20,0 chr1 145748485 . T . PASS END=145748490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 145748491 . G . PASS END=145748491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 145748492 . T . PASS END=145748502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 145748503 . G A, 33.27 PASS DP=23;MQ=44.37;MQRankSum=-0.742;ReadPosRankSum=2.356;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:8,2,0:7,6,0:33:68,0,40,257,527,784:219,0,255:13,0:3.3272e+01,2.2446e-03,4.3377e+01,2.5726e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,4,5,3:6,9,3,5 chr1 145748504 . G . PASS END=145748513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 145748514 . T . PASS END=145748523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 145748524 . C . PASS END=145748524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,698:0,11,255:17,0 chr1 145748525 . C . PASS END=145748540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:21,0 chr1 145748541 . C . PASS END=145748544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145748545 . A . PASS END=145748587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,538:0,40,255:19,0 chr1 145752428 . G . PASS END=145752429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 145752430 . A . PASS END=145752430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 145752431 . A . PASS END=145752433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 145752434 . A . PASS END=145752434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 145752435 . G . PASS END=145752440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr1 145752441 . G . PASS END=145752452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:34,0 chr1 145752453 . T . PASS END=145752453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1085:0,63,255:33,0 chr1 145752454 . A . PASS END=145752473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1142:0,85,255:34,0 chr1 145752474 . T . PASS END=145752474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:32,0 chr1 145752475 . A . PASS END=145752536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:30:0,83,1185:0,83,255:37,0 chr1 145752537 . T . PASS END=145752537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 145752538 . G . PASS END=145752538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 145752539 . C . PASS END=145752539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 145752540 . C . PASS END=145752541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:30,0 chr1 145752542 . G . PASS END=145752542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 145752543 . C . PASS END=145752546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 145752547 . G . PASS END=145752547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:26,0 chr1 145752548 . A . PASS END=145752548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 145752549 . G . PASS END=145752564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1078:0,74,255:26,0 chr1 145753955 . G . PASS END=145753975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 145753976 . G . PASS END=145754085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 145754086 . T . PASS END=145754086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:7,0 chr1 145754087 . G . PASS END=145754106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 145754107 . C . PASS END=145754107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 145754108 . A . PASS END=145754110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 145754111 . G . PASS END=145754118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,227:6,0 chr1 145754119 . T . PASS END=145754150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 145756417 . G . PASS END=145756417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 145756418 . T . PASS END=145756418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 145756419 . C . PASS END=145756420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 145756421 . A . PASS END=145756441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,333:0,27,255:9,0 chr1 145756442 . T . PASS END=145756448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 145756449 . C . PASS END=145756470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,296:0,27,255:9,0 chr1 145756471 . A . LowGQ END=145756471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr1 145756472 . G . PASS END=145756473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 145756474 . A . PASS END=145756488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 145756489 . T . PASS END=145756498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 145756499 . C . LowGQ END=145756499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:8,0 chr1 145756500 . G . PASS END=145756505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 145756506 . T . PASS END=145756506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 145756507 . C . PASS END=145756526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 145756527 . G . PASS END=145756549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 145756550 . A . LowGQ END=145756613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,22:0,0,33:3,0 chr1 145758846 . A . PASS END=145758901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,130,255:40,0 chr1 145760733 . G . PASS END=145760789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:64:0,120,1800:0,136,255:40,0 chr1 145761178 . G . PASS END=145761181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 145761182 . A . PASS END=145761183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 145761184 . T . PASS END=145761187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 145761188 . C . PASS END=145761188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 145761189 . T . PASS END=145761195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:8,0 chr1 145761196 . C . PASS END=145761196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 145761197 . T . PASS END=145761200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 145761201 . C . PASS END=145761201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 145761202 . T . PASS END=145761208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 145761209 . G . PASS END=145761213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr1 145761214 . G . PASS END=145761214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 145761215 . A . PASS END=145761231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:15:0,41,537:0,41,255:19,0 chr1 145761232 . G . PASS END=145761232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145761233 . T . PASS END=145761233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 145761234 . C . PASS END=145761260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,760:0,62,255:26,0 chr1 145761261 . T . PASS END=145761271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1064:0,84,255:30,0 chr1 145761272 . T . PASS END=145761272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:29,0 chr1 145761273 . C . PASS END=145761374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1095:0,84,255:40,0 chr1 145761375 . G . PASS END=145761375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:30,0 chr1 145761376 . G . PASS END=145761390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1115:0,80,255:30,0 chr1 145761391 . T . PASS END=145761392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 145761393 . C . PASS END=145761396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 145761397 . A . PASS END=145761402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr1 145762039 . G . PASS END=145762043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 145762044 . G . PASS END=145762044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 145762045 . A . PASS END=145762047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,574:0,12,255:14,0 chr1 145762048 . G . PASS END=145762048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 145762049 . G . PASS END=145762049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:14,0 chr1 145762050 . C . PASS END=145762050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:14,0 chr1 145762051 . G . PASS END=145762052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:14,0 chr1 145762053 . T . PASS END=145762053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 145762054 . C . PASS END=145762055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,504:0,6,255:14,0 chr1 145762056 . T . PASS END=145762057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 145762058 . C . PASS END=145762058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 145762059 . T . PASS END=145762059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 145762060 . G . PASS END=145762060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr1 145762061 . A . PASS END=145762068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,498:0,6,255:15,0 chr1 145762069 . G . PASS END=145762070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 145762071 . G . PASS END=145762071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 145762072 . C . PASS END=145762075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 145762076 . A . PASS END=145762076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 145762077 . G . PASS END=145762077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 145762078 . G . PASS END=145762078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 145762079 . A . PASS END=145762081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 145762082 . A . PASS END=145762084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:18,0 chr1 145762085 . A . PASS END=145762085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:17,0 chr1 145762086 . T . PASS END=145762086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 145762087 . G . PASS END=145762096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,653:0,21,255:19,0 chr1 145762097 . A . PASS END=145762097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 145762098 . A . PASS END=145762103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 145762104 . T . PASS END=145762104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,1 chr1 145762105 . G . PASS END=145762106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:22:0,30,762:0,30,255:19,1 chr1 145762107 . G . PASS END=145762111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 145762112 . A . PASS END=145762122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,713:0,60,255:20,0 chr1 145762123 . G . PASS END=145762129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr1 145762130 . A . PASS END=145762160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr1 145762161 . T . PASS END=145762315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,994:0,81,255:40,0 chr1 145762316 . T . PASS END=145762329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,77,255:25,0 chr1 145763420 . C . PASS END=145763421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 145763422 . C . PASS END=145763427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 145763428 . A . PASS END=145763435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1003:0,87,255:29,0 chr1 145763436 . T . PASS END=145763436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 145763437 . C . PASS END=145763438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 145763439 . A . PASS END=145763439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1001:0,76,255:27,0 chr1 145763440 . C . PASS END=145763444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:29,0 chr1 145763445 . T . PASS END=145763445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 145763446 . G . PASS END=145763447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 145763448 . T . PASS END=145763448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 145763449 . G . PASS END=145763452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 145763570 . G . PASS END=145763623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:92:41:0,92,1676:0,92,255:40,0 chr1 145763795 . G . PASS END=145763815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,108,1618:0,108,255:40,0 chr1 145765019 . T . PASS END=145765069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:8,0 chr1 145765070 . G . PASS END=145765073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 145765074 . A . PASS END=145765082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 145765083 . A . PASS END=145765083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 145765084 . G . PASS END=145765089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 145765090 . T . PASS END=145765093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 145765094 . C . PASS END=145765094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 145765095 . A . PASS END=145765113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:38:13:0,38,340:0,38,255:13,0 chr1 145765114 . A . PASS END=145765114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 145765115 . A . PASS END=145765122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr1 145765123 . A . PASS END=145765123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr1 145765124 . G . PASS END=145765153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 145765154 . A . PASS END=145765154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 145765155 . G . PASS END=145765166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr1 145765167 . C . PASS END=145765167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 145765168 . G . PASS END=145765178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 145765179 . G . PASS END=145765179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 145765180 . G . PASS END=145765180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 145765181 . C . PASS END=145765205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:19,0 chr1 145765206 . G . PASS END=145765208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145765209 . G . PASS END=145765209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 145765210 . A . PASS END=145765212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 145765213 . C . PASS END=145765216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,62,255:18,0 chr1 145765217 . G . PASS END=145765225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:21:0,62,776:0,62,255:21,0 chr1 145765369 . C . PASS END=145765434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:85:0,120,1800:0,208,255:40,0 chr1 145769408 . C . PASS END=145769409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 145769410 . T . PASS END=145769416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 145769417 . A . PASS END=145769417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:13,0 chr1 145769418 . G . PASS END=145769429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,529:0,42,255:18,0 chr1 145769430 . C . PASS END=145769451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,778:0,63,255:22,0 chr1 145769452 . T . PASS END=145769452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr1 145769453 . T . PASS END=145769459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 145769460 . A . PASS END=145769460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:22,0 chr1 145769461 . C . PASS END=145769466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,856:0,69,255:24,0 chr1 145769467 . T . PASS END=145769467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 145769468 . G . PASS END=145769476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr1 145769477 . G . PASS END=145769477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 145769478 . T . PASS END=145769481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 145769482 . G . PASS END=145769482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 145769483 . G . PASS END=145769493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr1 145769494 . T . PASS END=145769494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 145769495 . C . PASS END=145769497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 145771635 . A . PASS END=145771652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1178:0,80,255:32,0 chr1 145771653 . A . PASS END=145771653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1028:0,57,255:31,0 chr1 145771654 . T . PASS END=145771666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:32,0 chr1 145771667 . T . PASS END=145771667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:31,0 chr1 145771668 . C . PASS END=145771718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1210:0,86,255:35,0 chr1 145771719 . A . PASS END=145771730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,81,255:25,0 chr1 145787772 . C . PASS END=145787772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 145787773 . A . PASS END=145787774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:28,0 chr1 145787775 . G . PASS END=145787775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 145787776 . A . PASS END=145787777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1032:0,62,255:27,0 chr1 145787778 . A . PASS END=145787780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145787781 . T . PASS END=145787781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1000:0,43,255:26,0 chr1 145787782 . T . PASS END=145787782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 145787783 . T . PASS END=145787783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:26,0 chr1 145787784 . C . PASS END=145787791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:27:0,74,1078:0,74,255:28,0 chr1 145787792 . A . PASS END=145787792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 145787793 . G . PASS END=145787793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 145787794 . T . PASS END=145787794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,976:0,57,255:27,0 chr1 145787795 . A . PASS END=145787796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 145787797 . A . PASS END=145787797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 145787798 . T . PASS END=145787802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1172:0,85,255:33,0 chr1 145787803 . A . PASS END=145787803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1093:0,69,255:31,0 chr1 145787804 . A . PASS END=145787814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1160:0,91,255:36,0 chr1 145787815 . A . PASS END=145787815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:34,0 chr1 145787816 . G . PASS END=145787835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1202:0,91,255:38,0 chr1 145787836 . T . PASS END=145787836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1164:0,67,255:35,0 chr1 145787837 . T . PASS END=145787855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:37:0,84,1307:0,84,255:37,0 chr1 145787856 . T . PASS END=145787856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:32,0 chr1 145787857 . A . PASS END=145787860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1294:0,92,255:34,0 chr1 145787861 . T . PASS END=145787861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1056:0,36,255:29,0 chr1 145787862 . C . PASS END=145787864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1440:0,108,255:34,0 chr1 145788767 . C . PASS END=145788785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:19,0 chr1 145788786 . G . PASS END=145788788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 145788789 . G . PASS END=145788805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,690:0,54,255:19,0 chr1 145788806 . C . PASS END=145788811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 145788812 . T . PASS END=145788812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 145788813 . A . PASS END=145788850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,717:0,63,255:22,0 chr1 145788851 . A . PASS END=145788851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 145788852 . A . PASS END=145788853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 145788854 . A . PASS END=145788854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,683:0,49,255:20,0 chr1 145788855 . T . PASS END=145788855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 145789337 . T . PASS END=145789377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:84:0,120,1800:0,222,255:40,0 chr1 145791041 . A . LowDepth;LowGQ END=145791050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 145791051 . C . LowDepth END=145791170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 145803308 . C . LowDepth;LowGQ END=145803388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 145804245 . C . PASS END=145804251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 145804252 . A . PASS END=145804313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,119:0,12,119:5,0 chr1 145804314 . G . PASS END=145804365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 145811342 . C . PASS END=145811393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,607:0,41,255:20,0 chr1 145811394 . C . PASS END=145811402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 145811403 . C . PASS END=145811433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,613:0,51,255:19,0 chr1 145811434 . T . PASS END=145811443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,35,255:11,0 chr1 145811444 . C . PASS END=145811445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:10:0,24,360:0,30,255:9,0 chr1 145811446 . G . PASS END=145811446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 145811447 . A . PASS END=145811455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 145811456 . A . PASS END=145811456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 145811457 . G . PASS END=145811463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr1 145811896 . G . PASS END=145812002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,105,1510:0,105,255:40,0 chr1 145816637 . C . PASS END=145816638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 145816639 . G . PASS END=145816639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 145816640 . C . PASS END=145816640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,657:0,30,255:18,0 chr1 145816641 . T . PASS END=145816641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 145816642 . A . PASS END=145816642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr1 145816643 . T . PASS END=145816656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,713:0,47,255:19,0 chr1 145816657 . G . PASS END=145816663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 145816664 . A . PASS END=145816676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:19,0 chr1 145816677 . C . PASS END=145816714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,695:0,63,255:22,0 chr1 145816715 . A . PASS END=145816715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:17,0 chr1 145816716 . T . PASS END=145816739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:16:0,48,576:0,48,255:19,0 chr1 145816740 . T . PASS END=145816740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 145818767 . C . PASS END=145818826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:75:0,120,1800:0,181,255:40,0 chr1 145826590 . T . PASS END=145826595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 145826596 . G . PASS END=145826596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 145826597 . G . PASS END=145826610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,613:0,45,255:17,0 chr1 145826611 . T . PASS END=145826611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 145826612 . A . PASS END=145826628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,643:0,51,255:19,0 chr1 145826629 . A . PASS END=145826634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 145826635 . T . PASS END=145826703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 145826704 . T . PASS END=145826704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 145826705 . G . PASS END=145826705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 145826706 . A . PASS END=145826706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 145826707 . C . PASS END=145826715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 145826888 . C . PASS END=145826927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1296:0,87,255:36,0 chr1 145826928 . A . PASS END=145826928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:27,0 chr1 145826929 . T . PASS END=145826929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 146019128 . A . LowDepth;LowGQ END=146019130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146020854 . G . PASS END=146020880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 146020881 . C . PASS END=146020883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 146020884 . T C, 13.41 PASS DP=10;MQ=13.73;MQRankSum=1.133;ReadPosRankSum=2.383;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,4,0:0.400,0.000:10:3,2,0:3,2,0:12:48,0,14,143,215,358:125,0,203:6,0:1.3414e+01,2.8833e-01,1.7288e+01,1.4331e+02,2.4966e+02,3.6091e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,0,4,0:3,3,2,2 chr1 146020885 . G . PASS END=146020893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:12,0 chr1 146020894 . C . PASS END=146020910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,512:0,42,255:19,0 chr1 146020911 . G . PASS END=146020921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,732:0,63,255:22,0 chr1 146020922 . G . PASS END=146020966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,701:0,63,255:22,0 chr1 146020967 . C . PASS END=146020986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 146020987 . C . PASS END=146020997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,644:0,49,255:19,0 chr1 146215943 . C . LowDepth;LowGQ END=146216051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146216766 . C . LowDepth;LowGQ END=146216790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146216791 . A . LowDepth END=146216909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr1 146216910 . C . PASS END=146216938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 146217598 . C . LowGQ END=146217649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,61:0,0,69:3,0 chr1 146218359 . T . LowDepth;LowGQ END=146218531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146219127 . C . LowDepth END=146219178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 146220667 . C . LowDepth;LowGQ END=146220718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146223059 . C . LowDepth;LowGQ END=146223231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146226972 . C . LowDepth;LowGQ END=146227023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146228529 . C . LowDepth;LowGQ END=146228637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146229352 . C . LowDepth;LowGQ END=146229440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146229441 . C . PASS END=146229524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,31:0,3,31:3,0 chr1 146230954 . T . LowDepth;LowGQ END=146231039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr1 146231040 . A . LowDepth;LowGQ END=146231076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr1 146231077 . A G, 5.48 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=10.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4752e+00,4.4643e+00,4.4546e+00,4.0245e+01,3.9234e+01,4.3245e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,1,0 chr1 146231078 . G . LowDepth END=146231114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 146231115 . T . LowDepth END=146231126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr1 146231723 . C . PASS END=146231729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 146231730 . A . PASS END=146231730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 146231731 . T . PASS END=146231731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 146231732 . G . PASS END=146231733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 146231734 . T . PASS END=146231734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 146231735 . G . PASS END=146231738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 146231739 . C . PASS END=146231740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 146231741 . T . PASS END=146231751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,77,255:26,0 chr1 146231752 . C . PASS END=146231766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 146231767 . T . PASS END=146231774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:29,0 chr1 146238463 . C . LowDepth END=146238514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 146244643 . C . PASS END=146244654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 146244655 . T . PASS END=146244659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 146244660 . A . PASS END=146244660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 146244661 . A . PASS END=146244670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 146244671 . T . PASS END=146244671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 146244672 . G . PASS END=146244680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 146244681 . A . PASS END=146244691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 146244692 . T . PASS END=146244693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 146244694 . T . PASS END=146244701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 146244702 . G . PASS END=146244704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 146244705 . G . PASS END=146244707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 146244708 . G . PASS END=146244717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:8:0,15,225:0,24,255:6,0 chr1 146395342 . A . PASS END=146395347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 146395348 . G . PASS END=146395351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 146395352 . C . PASS END=146395352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 146395353 . A . PASS END=146395356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 146395357 . G . PASS END=146395359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 146395360 . C . PASS END=146395360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 146395361 . C . PASS END=146395362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 146395363 . T . PASS END=146395363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 146395364 . G . PASS END=146395387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,816:0,64,255:25,0 chr1 146395388 . A . PASS END=146395390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 146395391 . T . PASS END=146395391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,929:0,65,255:26,0 chr1 146395392 . T . PASS END=146395394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 146395395 . A . PASS END=146395395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 146395396 . G . PASS END=146395405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,764:0,81,255:28,0 chr1 146395406 . A . PASS END=146395406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 146395407 . G . PASS END=146395408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 146395409 . A . PASS END=146395409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 146395410 . A . PASS END=146395411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 146395412 . T . PASS END=146395412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 146395413 . G . PASS END=146395446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:31:0,86,1190:0,86,255:40,0 chr1 146395447 . A G, 19.23 PASS DP=46;MQ=35.96;MQRankSum=-4.847;ReadPosRankSum=4.756;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,17,0:0.370,0.000:46:12,11,0:17,6,0:19:54,0,41,600,992,1592:255,0,255:26,0:1.9229e+01,5.2344e-02,4.4177e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,12,5:16,13,10,7 chr1 146395448 . G . PASS END=146395484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1530:0,105,255:40,0 chr1 146395485 . C . PASS END=146395499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,122,255:40,0 chr1 146395500 . C . PASS END=146395516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,110,1700:0,110,255:40,0 chr1 146397359 . A . PASS END=146397443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:73:0,120,1800:0,172,255:40,0 chr1 146397444 . A . LowGQ END=146397444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,7:74:0:74:0,0,2235:49,0,255:40,0 chr1 146397445 . C . PASS END=146397461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,200,255:40,0 chr1 146398293 . G . PASS END=146398349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,102,1216:0,104,255:40,0 chr1 146398350 . G . PASS END=146398386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:94:43:0,94,1612:0,94,255:40,0 chr1 146398387 . G C, 6.53 DRAGENSnpHardQUAL DP=54;MQ=21.44;MQRankSum=-0.168;ReadPosRankSum=0.424;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,14,0:0.259,0.000:54:24,10,0:16,4,0:7:40,0,38,499,1349,1848:255,0,255:36,0:6.5326e+00,1.0916e+00,4.2425e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,16,3,11:22,18,7,7 chr1 146398388 . A . PASS END=146398421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,149,255:40,0 chr1 146398422 . G . LowGQ END=146398422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:0:55:0,0,1645:45,0,255:40,0 chr1 146398423 . G . PASS END=146398424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,168,255:40,0 chr1 146398425 . C . LowGQ END=146398425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:0:57:0,0,1814:22,0,255:40,0 chr1 146398426 . A . PASS END=146398507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,145,255:40,0 chr1 146399555 . A . PASS END=146399561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:96:0,120,1800:0,255,255:40,0 chr1 146399562 . T . LowGQ END=146399562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,10:100:0:100:0,0,3033:65,0,255:40,0 chr1 146399563 . G . PASS END=146399599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:100:0,120,1800:0,245,255:40,0 chr1 146399600 . A . PASS END=146399627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:111:0,120,1800:0,242,255:40,0 chr1 146400091 . G . LowGQ END=146400150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:2,0 chr1 146400151 . C . LowGQ END=146400185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:2,0 chr1 146400186 . A T, 2.37 DRAGENSnpHardQUAL DP=2;MQ=5.70;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,1,0:1,0,0:4:33,0,5,36,36,72:33,0,33:1,0:2.3747e+00,4.3964e+00,1.2387e+01,4.0154e+01,7.4909e+01,7.8897e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,1,1,0:1,0,1,0 chr1 146400187 . C . LowGQ END=146400266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,1:2:0:0:0,0,0:0,0,0:2,0 chr1 146400267 . A . LowDepth;LowGQ END=146400302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146401671 . T . LowDepth;LowGQ END=146401880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr1 146403655 . A . PASS END=146403657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 146403658 . A . PASS END=146403658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 146403659 . T . PASS END=146403661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 146403662 . A . PASS END=146403662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 146403663 . G . PASS END=146403665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:19,0 chr1 146403666 . T . PASS END=146403666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 146403667 . G . PASS END=146403667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 146403668 . C . PASS END=146403668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr1 146403669 . A . PASS END=146403670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 146403671 . A . PASS END=146403671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,536:0,27,255:18,0 chr1 146403672 . G . PASS END=146403681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,662:0,44,255:19,0 chr1 146403682 . A . PASS END=146403685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,778:0,63,255:22,0 chr1 146403686 . T . PASS END=146403686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,0 chr1 146403687 . A . PASS END=146403701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,792:0,66,255:24,0 chr1 146403702 . C . PASS END=146403702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 146403703 . T . PASS END=146403707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:25,0 chr1 146403708 . T . PASS END=146403709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:24,0 chr1 146403710 . C . PASS END=146403711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,842:0,75,255:25,0 chr1 146403712 . A . PASS END=146403714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 146403715 . A . PASS END=146403722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,74,255:25,0 chr1 146403723 . C . PASS END=146403723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 146403724 . T . PASS END=146403726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 146403727 . C . PASS END=146403727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 146403728 . A . PASS END=146403729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 146403730 . A . PASS END=146403730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,738:0,28,255:22,0 chr1 146403731 . G . PASS END=146403741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 146403742 . A . PASS END=146403742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 146403743 . A . PASS END=146403744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,917:0,64,255:26,0 chr1 146403745 . C . PASS END=146403746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 146403747 . G . PASS END=146403757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,907:0,64,255:26,0 chr1 146404589 . G . LowDepth;LowGQ END=146404712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146404713 . G . PASS END=146404749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,31:0,3,31:2,0 chr1 146404750 . A . LowGQ END=146404786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr1 146404787 . C A, 36.00 PASS DP=3;MQ=23.54;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:7:73,9,0,116,9,116:116,9,0:0,0:3.5998e+01,6.9979e+00,9.6877e-01,1.1427e+02,4.1768e+01,1.1727e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,0:0,0,1,2 chr1 146404788 . C . PASS END=146404802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr1 146404803 . G . PASS END=146404803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 146405854 . A . LowDepth;LowGQ END=146405878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146405879 . T . LowDepth END=146405926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 146406390 . G . PASS END=146406513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 146406514 . T . PASS END=146406522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 146406523 . G . PASS END=146406528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 146406529 . G . PASS END=146406559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,88:3,0 chr1 146406560 . A C, 11.33 PASS DP=3;MQ=3.32;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,2,0:0,1,0:6:48,9,0,116,9,116:116,9,0:0,0:1.1329e+01,7.3290e+00,1.2999e+00,1.1464e+02,4.2099e+01,1.1764e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,0:0,0,2,1 chr1 146406561 . C . PASS END=146406597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,64:0,9,64:3,0 chr1 146406598 . C . PASS END=146406601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 146407958 . T . PASS END=146408167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:31:0,84,1202:0,93,255:40,0 chr1 146409946 . A . PASS END=146410048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:32:0,83,1178:0,83,255:40,0 chr1 146410884 . G . LowDepth;LowGQ END=146411098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146412136 . A . LowGQ END=146412208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,39:3,0 chr1 146412673 . G . LowDepth;LowGQ END=146412878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146414168 . A . PASS END=146414170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:4,0 chr1 146414171 . A . LowGQ END=146414171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,84:5,0,88:3,0 chr1 146414172 . T . PASS END=146414175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 146414176 . A . LowGQ END=146414176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 146414177 . G . PASS END=146414178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 146414179 . G . LowGQ END=146414180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 146414181 . T . PASS END=146414182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 146414183 . A . LowGQ END=146414183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 146414184 . T . PASS END=146414219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,103:0,12,103:5,0 chr1 146418138 . G . LowGQ END=146418170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,53:0,0,61:3,0 chr1 146418171 . C . PASS END=146418178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 146418179 . C . PASS END=146418236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:6,0 chr1 146418237 . G . PASS END=146418237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 146418238 . T . PASS END=146418238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 146418239 . C . PASS END=146418270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 146418271 . C . PASS END=146418301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 146419344 . G . PASS END=146419344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 146419345 . A . PASS END=146419368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 146419369 . G . PASS END=146419395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:3:0,9,108:0,9,108:3,0 chr1 146420019 . G . PASS END=146420019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 146420020 . C . PASS END=146420023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 146420024 . G . PASS END=146420024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr1 146420025 . C . PASS END=146420030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 146420031 . G . PASS END=146420044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr1 146420045 . A . PASS END=146420054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,554:0,40,255:21,0 chr1 146420055 . A . PASS END=146420056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 146420057 . T . PASS END=146420058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:23,0 chr1 146420059 . T . PASS END=146420059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 146420060 . T . PASS END=146420067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 146420068 . T . PASS END=146420068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:27,0 chr1 146420069 . C . PASS END=146420071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 146420072 . T . PASS END=146420073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1086:0,74,255:29,0 chr1 146420074 . G . PASS END=146420081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1103:0,82,255:33,0 chr1 146420082 . T G, 141.86 PASS DP=35;MQ=24.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:102:180,105,0,1304,105,1304:255,105,0:0,0:1.4186e+02,1.0186e+02,0.0000e+00,4.5000e+02,1.3663e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,17:0,0,18,17 chr1 146420083 . T . PASS END=146420119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1199:0,84,255:39,0 chr1 146420120 . C . PASS END=146420183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1258:0,91,255:40,0 chr1 146420184 . C . PASS END=146420191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:26,0 chr1 146420911 . A . LowDepth;LowGQ END=146420962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146422441 . G . LowDepth;LowGQ END=146422492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146423163 . G . LowDepth;LowGQ END=146423335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146424050 . A . LowDepth;LowGQ END=146424158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146427206 . G . LowDepth;LowGQ END=146427257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146427928 . G . LowDepth;LowGQ END=146428100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146428815 . A . LowDepth;LowGQ END=146428923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146430441 . A . LowDepth;LowGQ END=146430492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146431971 . G . LowDepth;LowGQ END=146432022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146433580 . A . LowDepth;LowGQ END=146433688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146435206 . A . LowDepth;LowGQ END=146435257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146436736 . G . LowDepth;LowGQ END=146436787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146438345 . A . LowDepth;LowGQ END=146438453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146439971 . A . LowDepth;LowGQ END=146440022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146441506 . A . LowDepth;LowGQ END=146441557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146443046 . A . LowDepth;LowGQ END=146443097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146443693 . G . LowDepth;LowGQ END=146443865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146444575 . G . LowDepth;LowGQ END=146444626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146445299 . G . LowDepth;LowGQ END=146445471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146447726 . A . LowDepth;LowGQ END=146447777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146449256 . G . LowDepth;LowGQ END=146449307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146449978 . G . LowDepth;LowGQ END=146450150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146450865 . A . LowDepth;LowGQ END=146450973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146451599 . G . LowDepth;LowGQ END=146451771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146452491 . A . LowDepth;LowGQ END=146452542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146453138 . G . LowDepth;LowGQ END=146453310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146454020 . G . LowDepth END=146454071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 146454738 . G . PASS END=146454760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,70:0,6,70:2,0 chr1 146454761 . T C, 2.19 DRAGENSnpHardQUAL DP=2;MQ=12.59;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,0,0:1,1,0:4:33,0,11,36,36,72:33,0,33:1,0:2.1893e+00,4.1942e+00,1.8194e+01,3.9969e+01,7.4718e+01,7.8723e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,1,0,1:1,0,1,0 chr1 146454762 . A . PASS END=146454796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,62:0,6,62:2,0 chr1 146454797 . G . LowDepth;LowGQ END=146454840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:2,0 chr1 146454841 . T . LowDepth;LowGQ END=146454910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146455625 . A . LowDepth;LowGQ END=146455733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146457251 . A . LowDepth;LowGQ END=146457302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146459498 . G . LowDepth;LowGQ END=146459670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146460385 . A . LowDepth;LowGQ END=146460493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146462011 . A . LowDepth;LowGQ END=146462062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146462658 . G . LowDepth;LowGQ END=146462830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146464264 . G . LowDepth;LowGQ END=146464436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146465151 . A . LowDepth;LowGQ END=146465259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 146465878 . G . PASS END=146465891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:89:31:0,89,1149:0,89,255:35,0 chr1 146465892 . T . PASS END=146465892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:34,0 chr1 146465893 . G . PASS END=146465915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:35:0,95,1311:0,95,255:36,0 chr1 146465916 . T . PASS END=146465916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1179:0,78,255:34,0 chr1 146465917 . C . PASS END=146465969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,111,1620:0,114,255:40,0 chr1 146465970 . T . PASS END=146465970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:36,0 chr1 146465971 . A . PASS END=146466075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1125:0,82,255:40,0 chr1 146466076 . A . PASS END=146466089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:23,0 chr1 146466090 . T . PASS END=146466090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 146466091 . C . PASS END=146466099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 146466100 . G . PASS END=146466100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 146466101 . G . PASS END=146466101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 146466102 . G . PASS END=146466121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,47,255:17,0 chr1 146631144 . T . PASS END=146631221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,111,1665:0,126,255:40,0 chr1 146632376 . T . PASS END=146632412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,138,255:40,0 chr1 146633291 . C . PASS END=146633359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,114,1576:0,116,255:40,0 chr1 146634019 . A . PASS END=146634152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:38:0,90,1440:0,90,255:40,0 chr1 146638077 . C . PASS END=146638197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:54:0,120,1800:0,159,255:40,0 chr1 146638425 . C . PASS END=146638518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,128,255:40,0 chr1 146639346 . C . PASS END=146639348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 146639349 . T . PASS END=146639349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 146639350 . T . PASS END=146639350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:26,0 chr1 146639351 . A . PASS END=146639351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 146639352 . A . PASS END=146639352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:26,0 chr1 146639353 . T . PASS END=146639367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,919:0,81,255:30,0 chr1 146639368 . T . PASS END=146639368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 146639369 . G . PASS END=146639370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr1 146639371 . T . PASS END=146639371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:30,0 chr1 146639372 . C . PASS END=146639378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1141:0,93,255:31,0 chr1 146639379 . T . PASS END=146639379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr1 146639380 . T . PASS END=146639385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1201:0,93,255:32,0 chr1 146639386 . A . PASS END=146639386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr1 146639387 . C . PASS END=146639462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1158:0,83,255:37,0 chr1 146639463 . G . PASS END=146639512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 146643568 . C . PASS END=146643569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 146643570 . T . PASS END=146643570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 146643571 . G . PASS END=146643580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,714:0,54,255:19,0 chr1 146643581 . A . PASS END=146643592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 146643593 . C . PASS END=146643595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 146643596 . G . PASS END=146643599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 146643600 . C . PASS END=146643612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:22,0 chr1 146643613 . C . PASS END=146643614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 146643615 . C . PASS END=146643634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,847:0,69,255:23,0 chr1 146643635 . C . PASS END=146643635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 146643636 . C . PASS END=146643646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 146643647 . C . PASS END=146643647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr1 146643648 . C . PASS END=146643653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 146643654 . C . PASS END=146643669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:18,0 chr1 146643670 . A . PASS END=146643670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 146643671 . G . PASS END=146643673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 146643674 . T . PASS END=146643698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:12,0 chr1 146643699 . C . PASS END=146643699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 146643700 . C . PASS END=146643721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,411:0,36,255:12,0 chr1 146643722 . A . PASS END=146643722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 146643723 . T . PASS END=146643723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 146656071 . T . PASS END=146656136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:61:0,120,1800:0,150,255:40,0 chr1 146656137 . A . PASS END=146656173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:78:0,120,1800:0,207,255:40,0 chr1 146656174 . A T, 47.22 PASS DP=78;MQ=250.00;MQRankSum=7.471;ReadPosRankSum=3.764;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,32,0:0.410,0.000:78:24,13,0:22,19,0:46:82,0,50,1129,1644,2773:255,0,255:40,0:4.7220e+01,1.0406e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,23,14,18:23,23,19,13 chr1 146656175 . A . PASS END=146656209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,173,255:40,0 chr1 146658479 . C . PASS END=146658797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1180:0,83,255:40,0 chr1 146658798 . A . PASS END=146658824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 146661756 . C . PASS END=146661828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,114,1710:0,129,255:40,0 chr1 146672734 . C . PASS END=146672735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1026:0,90,255:30,0 chr1 146672736 . T . PASS END=146672736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 146672737 . T . PASS END=146672743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 146672744 . C . PASS END=146672744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 146672745 . T . PASS END=146672868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1186:0,83,255:40,0 chr1 146672869 . T . PASS END=146672905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1212:0,89,255:36,0 chr1 146672906 . C T, 155.34 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1372,108,1372:255,108,0:0,0:1.5534e+02,1.0534e+02,0.0000e+00,4.5000e+02,1.4011e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,18:0,0,18,18 chr1 146672907 . G . PASS END=146672943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:36:0,99,1485:0,108,255:40,0 chr1 146672944 . C . PASS END=146673074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1186:0,81,255:40,0 chr1 146673075 . T . PASS END=146673086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:28:0,61,945:0,61,255:25,0 chr1 146676422 . C . PASS END=146676553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:45:0,93,1395:0,135,255:40,0 chr1 146676554 . A . PASS END=146676554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1238:0,67,255:30,0 chr1 146676555 . C . PASS END=146676558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:40:0,96,1440:0,120,255:32,0 chr1 146676559 . G . PASS END=146676559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:30,0 chr1 146676560 . G . PASS END=146676576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 146676577 . C . PASS END=146676590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,961:0,65,255:26,0 chr1 146680414 . C . PASS END=146680562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:41:0,99,1485:0,112,255:40,2 chr1 146680563 . G . PASS END=146680563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr1 146680564 . T . PASS END=146680565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,104,255:27,0 chr1 146680566 . C . PASS END=146680586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 146680587 . A . PASS END=146680601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:16:0,42,630:0,48,255:19,0 chr1 146680602 . G . PASS END=146680613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 146681425 . C . PASS END=146681425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 146683961 . C . PASS END=146684096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:31:0,81,1215:0,91,255:40,0 chr1 146684097 . T . PASS END=146684103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:29:0,72,1080:0,77,255:26,0 chr1 146684875 . C . PASS END=146685037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,106,1620:0,106,255:40,0 chr1 146687324 . C . PASS END=146687335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:42:0,80,1483:0,80,255:40,0 chr1 146687336 . A . PASS END=146687336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:73:45:0,73,1446:0,73,255:40,0 chr1 146687337 . T . PASS END=146687512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,101,1550:0,101,255:40,0 chr1 146696487 . C . PASS END=146696621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:39:0,96,1440:0,116,255:40,0 chr1 146714354 . A . PASS END=146714354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 146714355 . T . PASS END=146714365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 146714366 . G . PASS END=146714384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 146714385 . G . PASS END=146714385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 146714386 . C . PASS END=146714391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:18,0 chr1 146714392 . G T,C, 301.42 PASS DP=18;MQ=247.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,10,8,0:0.556,0.444,0.000:18:0,7,4,0:0,3,4,0:50:371,286,84,358,0,85,644,286,358,644:255,54,0:0,0:3.0142e+02,2.5142e+02,5.2516e+01,3.2288e+02,4.6077e-05,5.3000e+01,4.5000e+02,2.8619e+02,3.5765e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,8,10:0,0,11,7 chr1 146714393 . C . PASS END=146714409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,574:0,40,255:19,0 chr1 146714410 . G . PASS END=146714416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 146714417 . A . PASS END=146714417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 146714418 . C . PASS END=146714418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 146714419 . T . PASS END=146714419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 146714420 . G . PASS END=146714421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 146714422 . G . PASS END=146714422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 146714423 . G . PASS END=146714424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 146714425 . C . PASS END=146714427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 146714428 . A . PASS END=146714429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 146714430 . C . PASS END=146714430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 146714431 . C . PASS END=146714431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 146714432 . G . PASS END=146714433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 146714434 . G . PASS END=146714434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 146714435 . G . PASS END=146714438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 146714439 . C . PASS END=146714450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:17,0 chr1 146714451 . A . PASS END=146714452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 146714453 . C . PASS END=146714455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 146714456 . G . PASS END=146714456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 146714457 . A . PASS END=146714458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 146714459 . T . PASS END=146714463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 146714464 . G . PASS END=146714475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr1 146714476 . G . PASS END=146714480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 146724278 . G . PASS END=146724281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 146724282 . T . PASS END=146724282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 146724283 . C . PASS END=146724292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,871:0,67,255:26,0 chr1 146724293 . C . PASS END=146724303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 146724304 . G . PASS END=146724307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 146724308 . G . PASS END=146724312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 146724313 . A . PASS END=146724313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 146724314 . A . PASS END=146724317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1196:0,96,255:34,0 chr1 146724318 . G . PASS END=146724318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 146724319 . C . PASS END=146724362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:28:0,81,1086:0,83,255:34,0 chr1 146724363 . T . PASS END=146724378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 146724379 . A . PASS END=146724379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 146724380 . A . PASS END=146724390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,890:0,72,255:24,0 chr1 146726525 . A . PASS END=146726631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:87:40:0,87,1305:0,97,255:40,0 chr1 146727468 . A . PASS END=146727468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 146727469 . T . PASS END=146727469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 146727470 . T . PASS END=146727472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 146727473 . C . PASS END=146727473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 146727474 . T . PASS END=146727474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 146727475 . C . PASS END=146727475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 146727476 . C . PASS END=146727570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1164:0,80,255:40,0 chr1 146727571 . A . PASS END=146727571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:31,0 chr1 146727572 . C . PASS END=146727572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 146727573 . T . PASS END=146727582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:33:0,69,1035:0,82,255:26,0 chr1 146728185 . A . PASS END=146728205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:105:0,120,1800:0,255,255:40,0 chr1 146728206 . T . PASS END=146728220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:104:0,120,1800:0,255,255:40,0 chr1 146731491 . A . PASS END=146731572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,114,1742:0,114,255:40,0 chr1 146736081 . T . PASS END=146736082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 146736083 . C . PASS END=146736083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 146736084 . T . PASS END=146736089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 146736090 . G . PASS END=146736091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 146736092 . C T, 31.54 PASS DP=21;MQ=250.00;MQRankSum=3.000;ReadPosRankSum=2.015;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,4,0:0.190,0.000:21:9,3,0:8,1,0:32:66,0,50,143,579,722:92,0,255:16,0:3.1543e+01,3.0675e-03,5.3003e+01,1.4306e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,7,3,1:10,7,4,0 chr1 146736093 . T . PASS END=146736101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:25,0 chr1 146736102 . C . PASS END=146736102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 146736103 . T . PASS END=146736114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,953:0,75,255:25,0 chr1 146736115 . C . PASS END=146736136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1041:0,80,255:35,0 chr1 146736137 . A G, 35.58 PASS DP=35;MQ=249.80;MQRankSum=3.633;ReadPosRankSum=-0.091;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,10,0:0.286,0.000:35:11,7,0:14,3,0:35:70,0,50,358,894,1252:255,0,255:25,0:3.5577e+01,1.2243e-03,5.3001e+01,3.5779e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,6,4:12,13,7,3 chr1 146736138 . G . PASS END=146736174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1221:0,100,255:40,0 chr1 146736175 . T . PASS END=146736224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,86,255:40,0 chr1 146736225 . G . PASS END=146736225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:26,0 chr1 146736226 . A . PASS END=146736228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 146736229 . A . PASS END=146736234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 146736235 . C . PASS END=146736236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 146736237 . G . PASS END=146736243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:25,0 chr1 146737591 . C . PASS END=146737598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1352:0,111,255:38,0 chr1 146737599 . C . PASS END=146737599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1371:0,62,255:37,0 chr1 146737600 . T . PASS END=146737743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1180:0,85,255:40,0 chr1 146737744 . T . PASS END=146737746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 146739085 . A . PASS END=146739105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,184,255:40,0 chr1 146739106 . C . PASS END=146739177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,147,255:40,0 chr1 146740441 . G . PASS END=146740464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:51:0,81,1637:0,81,255:40,2 chr1 146740465 . T . PASS END=146740501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,137,255:40,0 chr1 146740502 . C G, 50.00 PASS DP=50;MQ=250.00;MQRankSum=6.034;ReadPosRankSum=4.341;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,27,0:0.540,0.000:50:12,14,0:11,13,0:48:85,0,49,920,794,1713:255,0,255:23,0:5.0000e+01,6.8081e-05,5.2443e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,8,19:11,12,13,14 chr1 146740503 . C . PASS END=146740537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:40:0,84,1260:0,104,255:40,0 chr1 146742591 . A . PASS END=146742591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 146742593 . G . PASS END=146742666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:46:0,98,1800:0,98,255:40,0 chr1 146743832 . G . PASS END=146743942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:37:0,104,1374:0,104,255:40,0 chr1 146747017 . G . PASS END=146747115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1282:0,105,255:40,0 chr1 146747116 . G . PASS END=146747131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1221:0,102,255:34,0 chr1 146747768 . G . PASS END=146747778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:33:0,99,1205:0,99,255:37,0 chr1 146747779 . T . PASS END=146747779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:35,0 chr1 146747780 . T . PASS END=146747871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:37:0,93,1174:0,93,255:40,0 chr1 146747872 . G . PASS END=146747872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1262:0,75,255:27,0 chr1 146747873 . C . PASS END=146747888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,99,255:31,0 chr1 146747889 . G . PASS END=146747895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:26,0 chr1 146747896 . A . PASS END=146747899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 146747900 . C . PASS END=146747921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr1 146751699 . T . PASS END=146751700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 146751701 . G . PASS END=146751707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1034:0,90,255:30,0 chr1 146751708 . A . PASS END=146751708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,857:0,56,255:28,0 chr1 146751709 . T . PASS END=146751715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,997:0,90,255:32,0 chr1 146751716 . A . PASS END=146751716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,967:0,79,255:31,0 chr1 146751717 . T . PASS END=146751721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1053:0,96,255:32,0 chr1 146751722 . T . PASS END=146751722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 146751723 . T . PASS END=146751744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:32:0,85,1166:0,85,255:40,0 chr1 146751745 . A . PASS END=146751759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:41:0,91,1492:0,91,255:40,0 chr1 146751760 . A . PASS END=146751760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1549:0,77,255:40,0 chr1 146751761 . T . PASS END=146751781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,114,1560:0,116,255:40,0 chr1 146751782 . A C, 184.06 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,20,0:0,26,0:134:222,137,0,1682,137,1682:255,138,0:0,0:1.8406e+02,1.3406e+02,0.0000e+00,4.5000e+02,1.6883e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,23:0,0,23,23 chr1 146751783 . C . PASS END=146751819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,102,1364:0,102,255:40,0 chr1 146751820 . C . PASS END=146751838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,105,1575:0,114,255:39,0 chr1 146751839 . A . PASS END=146751839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:35,0 chr1 146751840 . G . PASS END=146751864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:36,0 chr1 146756024 . A . PASS END=146756169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:44:0,90,1350:0,119,255:40,0 chr1 146756170 . A . PASS END=146756172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:60:45:0,60,900:0,135,255:21,0 chr1 146757001 . G . PASS END=146757001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 146757002 . T . PASS END=146757012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1023:0,84,255:28,0 chr1 146757013 . G . PASS END=146757036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:29:0,86,1080:0,86,255:35,0 chr1 146757037 . A . PASS END=146757037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:33,0 chr1 146757038 . G . PASS END=146757102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1280:0,92,255:40,0 chr1 146757103 . A . PASS END=146757103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1432:0,77,255:36,0 chr1 146757104 . A . PASS END=146757147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1260:0,90,255:38,0 chr1 146757148 . G . PASS END=146757148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:27,0 chr1 146757149 . C . PASS END=146757151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 146757152 . A . PASS END=146757152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 146757153 . A . PASS END=146757157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 146757158 . A . PASS END=146757164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1006:0,68,255:26,0 chr1 146757975 . G . PASS END=146757978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 146757979 . G . PASS END=146757979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 146757980 . C . PASS END=146757985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 146757986 . G . PASS END=146757986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 146757987 . G . PASS END=146757987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 146757988 . G . PASS END=146757988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:23,0 chr1 146757989 . A . PASS END=146757994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 146757995 . A . PASS END=146758018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1017:0,84,255:32,0 chr1 146758019 . C . PASS END=146758019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 146758020 . C . PASS END=146758099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1241:0,86,255:40,0 chr1 146758100 . C . PASS END=146758100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:51:44:0,51,1243:0,51,255:36,0 chr1 146758101 . T . PASS END=146758167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,96,255:40,0 chr1 146758168 . C . PASS END=146758169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:22,0 chr1 146758170 . C . PASS END=146758177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:45:28:0,45,675:0,84,255:17,0 chr1 146759314 . A . PASS END=146759316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 146759317 . A . PASS END=146759326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 146759327 . C . PASS END=146759327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 146759328 . T . PASS END=146759329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 146759330 . G . PASS END=146759343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1264:0,92,255:39,0 chr1 146759344 . T . PASS END=146759412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:39:0,96,1410:0,96,255:40,0 chr1 146763164 . A . PASS END=146763234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:50:0,85,1793:0,85,255:40,0 chr1 146765292 . T . PASS END=146765406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1186:0,86,255:40,0 chr1 146765609 . G . PASS END=146765686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1180:0,85,255:40,0 chr1 146765687 . C . PASS END=146765698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:26,0 chr1 146766070 . G . LowGQ END=146766070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,33:38:0:38:0,0,0:255,0,71:37,0 chr1 146766071 . T . PASS END=146766112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:97:38:0,97,1305:0,97,255:40,0 chr1 146766113 . T . PASS END=146766199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:39:0,90,1350:0,94,255:40,0 chr1 146767112 . A . PASS END=146767148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,103,1639:0,103,255:40,0 chr1 146767149 . G T, 200.48 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,27,0:0,24,0:150:238,153,0,338,338,338:255,153,0:0,0:2.0048e+02,1.5048e+02,0.0000e+00,3.3525e+02,3.7002e+02,3.3826e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,34:0,0,27,24 chr1 146767150 . C . PASS END=146767162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,122,255:40,0 chr1 146767163 . T . PASS END=146767163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1723:0,76,255:40,0 chr1 146767164 . T . PASS END=146767186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:44:0,98,1637:0,98,255:40,0 chr1 146767187 . T . PASS END=146767190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:39,0 chr1 147083389 . A . PASS END=147083412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,829:0,63,255:23,0 chr1 147083413 . G . PASS END=147083413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 147083414 . G . PASS END=147083427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,908:0,72,255:26,0 chr1 147083428 . G . PASS END=147083513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1208:0,83,255:34,0 chr1 147083514 . A . PASS END=147083515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 147083516 . G . PASS END=147083531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:30,0 chr1 147083532 . G . PASS END=147083537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 147083538 . G . PASS END=147083545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:28,0 chr1 147083546 . C . PASS END=147083546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:27,0 chr1 147083547 . C . PASS END=147083547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 147083548 . A . PASS END=147083553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 147083554 . C . PASS END=147083595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1119:0,83,255:33,0 chr1 147083636 . A . PASS END=147083685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1202:0,86,255:33,0 chr1 147083686 . G . PASS END=147083688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 147084682 . T . PASS END=147084682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 147084683 . A . PASS END=147084690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 147084691 . G . LowGQ END=147084691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 147084692 . T . PASS END=147084692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 147084693 . C . PASS END=147084696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 147084697 . G . PASS END=147084700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 147084701 . G . PASS END=147084701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 147084702 . A . PASS END=147084713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,427:0,33,255:13,0 chr1 147084714 . G . PASS END=147084731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,527:0,42,255:19,0 chr1 147084732 . C . PASS END=147084735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 147084736 . A . PASS END=147084811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 147084812 . T . PASS END=147084817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 147084818 . T . PASS END=147084822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:19,0 chr1 147084823 . C . PASS END=147084846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,847:0,66,255:23,0 chr1 147084847 . T . PASS END=147084847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 147084848 . A . PASS END=147084852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 147084853 . A . PASS END=147084855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 147084856 . C . PASS END=147084872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 147084873 . G . PASS END=147084875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 147084876 . T . PASS END=147084879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 147084880 . G . PASS END=147084888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1011:0,84,255:28,0 chr1 147084889 . T . PASS END=147084889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 147084890 . G . PASS END=147084890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 147084891 . G . PASS END=147084891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 147084892 . G . PASS END=147084932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:32,0 chr1 147084933 . G . PASS END=147084933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 147084934 . T . PASS END=147084949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1105:0,93,255:32,0 chr1 147084950 . T . PASS END=147084950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 147084951 . T . PASS END=147084958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 147084959 . A . PASS END=147084972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:23,0 chr1 147084973 . T . PASS END=147084973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 147084974 . C . PASS END=147084981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 147084982 . T . PASS END=147084994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,638:0,57,255:19,0 chr1 147084995 . A . PASS END=147084995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:16,0 chr1 147084996 . A . PASS END=147084998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 147086226 . A . PASS END=147086254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,762:0,63,255:26,0 chr1 147086255 . C . PASS END=147086261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147086262 . C . PASS END=147086265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 147086266 . G . PASS END=147086273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 147086274 . C . PASS END=147086274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 147086275 . A . PASS END=147086276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 147086277 . A . PASS END=147086277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 147086278 . C . PASS END=147086294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 147086295 . A . PASS END=147086295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 147086296 . T . PASS END=147086300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 147086301 . C . PASS END=147086303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 147086304 . C . PASS END=147086304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147086305 . C . PASS END=147086306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1011:0,73,255:26,0 chr1 147086307 . C . PASS END=147086308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147086309 . A . LowGQ END=147086309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,656:11,0,255:22,0 chr1 147086310 . G . PASS END=147086311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 147086312 . T . PASS END=147086312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,734:0,40,255:26,0 chr1 147086313 . C . PASS END=147086314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1045:0,85,255:33,0 chr1 147086315 . T . PASS END=147086316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,965:0,68,255:32,0 chr1 147086317 . T . PASS END=147086317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1211:0,102,255:34,0 chr1 147086318 . A . PASS END=147086318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1042:0,69,255:32,0 chr1 147086319 . C . PASS END=147086319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1011:0,52,255:31,0 chr1 147086320 . C . PASS END=147086320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,933:0,35,255:30,0 chr1 147086321 . C . PASS END=147086321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:31,0 chr1 147086322 . C . PASS END=147086322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1042:0,46,255:31,0 chr1 147086323 . C . PASS END=147086327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1180:0,85,255:34,0 chr1 147086328 . A . PASS END=147086328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1042:0,71,255:32,0 chr1 147086329 . T . PASS END=147086335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1166:0,85,255:34,0 chr1 147086336 . A . PASS END=147086336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1026:0,46,255:31,0 chr1 147086337 . C . PASS END=147086357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1112:0,85,255:32,0 chr1 147086358 . C . PASS END=147086358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 147086359 . T . LowGQ END=147086359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,831:64,0,255:24,0 chr1 147086360 . G . PASS END=147086373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,939:0,63,255:26,0 chr1 147086374 . A . PASS END=147086374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 147086375 . G . PASS END=147086376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 147086377 . C . PASS END=147086377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 147086378 . A . PASS END=147086382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 147086383 . G . PASS END=147086383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 147086384 . G . PASS END=147086384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 147086385 . T . PASS END=147086385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 147086386 . G . PASS END=147086394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 147086395 . T . PASS END=147086395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 147086396 . T . PASS END=147086400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 147086401 . T . PASS END=147086401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr1 147086402 . G . PASS END=147086403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 147086404 . G . PASS END=147086404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 147086405 . A . PASS END=147086406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr1 147086407 . G . PASS END=147086408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 147086409 . C . PASS END=147086409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 147086410 . C . PASS END=147086410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 147086411 . A . PASS END=147086415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 147087603 . A . PASS END=147087683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,128,255:40,0 chr1 147087684 . G . PASS END=147087702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:37:0,90,1350:0,111,255:40,0 chr1 147090622 . A . PASS END=147090629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,712:0,44,255:19,0 chr1 147090630 . G . PASS END=147090639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,925:0,66,255:25,0 chr1 147090640 . C . PASS END=147090671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:28:0,82,1070:0,82,255:36,0 chr1 147090672 . G . PASS END=147090672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:35,0 chr1 147090673 . C . PASS END=147090765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1390:0,101,255:40,0 chr1 147090766 . G . PASS END=147090766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:34,0 chr1 147090767 . C . PASS END=147090776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1260:0,98,255:32,0 chr1 147090777 . T . PASS END=147090777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:27,0 chr1 147090778 . C . PASS END=147090790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1325:0,95,255:34,0 chr1 147090791 . A . PASS END=147090791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:31,0 chr1 147090792 . G . PASS END=147090813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,92,255:34,0 chr1 147090814 . C . PASS END=147090814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr1 147090815 . T . PASS END=147090841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1178:0,83,255:34,0 chr1 147090842 . G . PASS END=147090843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:28,0 chr1 147090844 . T . PASS END=147090845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:30,0 chr1 147090846 . C . PASS END=147090851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:34:0,66,1204:0,66,255:29,0 chr1 147090852 . A . PASS END=147090854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1056:0,54,255:29,0 chr1 147090855 . G . PASS END=147090855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1031:0,38,255:28,0 chr1 147090856 . C . PASS END=147090859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:52:30:0,52,1086:0,52,255:28,0 chr1 147090860 . C . PASS END=147090860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 147090861 . A . PASS END=147090861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 147090862 . G . PASS END=147090862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:28,0 chr1 147090863 . A . PASS END=147090863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:29,0 chr1 147090864 . T . PASS END=147090865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,89,255:29,0 chr1 147090866 . G . PASS END=147090868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:30,0 chr1 147090869 . C . PASS END=147090869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 147090870 . T . PASS END=147090871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 147090872 . G . PASS END=147090873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 147090874 . C . PASS END=147090881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:52:30:0,52,1078:0,52,255:29,0 chr1 147090882 . A . PASS END=147090882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 147090883 . A . PASS END=147090886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,971:0,51,255:30,0 chr1 147090887 . C . PASS END=147090888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1180:0,93,255:31,0 chr1 147090889 . A . PASS END=147090890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:29,0 chr1 147090891 . C . PASS END=147090894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1073:0,60,255:30,0 chr1 147090895 . A . PASS END=147090895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 147090896 . G . PASS END=147090898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:29,0 chr1 147090899 . C . PASS END=147090904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1100:0,54,255:30,0 chr1 147090905 . C . PASS END=147090905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 147090906 . C . PASS END=147090958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1087:0,86,255:34,0 chr1 147090959 . C . PASS END=147090975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:73:26:0,73,1001:0,73,255:26,0 chr1 147090976 . G . PASS END=147090981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 147090982 . C . PASS END=147090982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 147090983 . C . PASS END=147090985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 147090986 . C . PASS END=147090986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 147090987 . C . PASS END=147091048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1134:0,82,255:34,0 chr1 147091049 . T . PASS END=147091049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 147091050 . A . PASS END=147091055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,95,255:30,0 chr1 147091056 . T . PASS END=147091056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 147091057 . C . PASS END=147091081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 147091082 . T . PASS END=147091082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 147091083 . T . PASS END=147091087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1117:0,93,255:31,0 chr1 147091088 . A . PASS END=147091088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:29,0 chr1 147091089 . T . PASS END=147091214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1073:0,80,255:39,0 chr1 147091215 . G . PASS END=147091272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,917:0,62,255:26,0 chr1 147091273 . G . PASS END=147091273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 147091274 . T . PASS END=147091274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 147091275 . A . PASS END=147091277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 147091278 . C . PASS END=147091280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr1 147091281 . T . PASS END=147091281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:24,0 chr1 147091282 . T . PASS END=147091319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,870:0,72,255:26,0 chr1 147091320 . G . PASS END=147091335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 147091336 . C . PASS END=147091336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 147091337 . C . PASS END=147091354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 147091355 . T . PASS END=147091355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 147091356 . G . PASS END=147091481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1061:0,85,255:34,0 chr1 147091482 . T . PASS END=147091482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 147091483 . C . PASS END=147091485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 147091486 . G . PASS END=147091493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1030:0,68,255:26,0 chr1 147091494 . C . PASS END=147091494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147091495 . C . PASS END=147091495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:25,0 chr1 147091496 . G . PASS END=147091496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147091497 . A . PASS END=147091497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 147091498 . G . PASS END=147091509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 147091510 . C . PASS END=147091524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 147091525 . C . PASS END=147091544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:18,0 chr1 147091545 . T . PASS END=147091545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 147091546 . G . PASS END=147091552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 147091553 . C . PASS END=147091553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 147091554 . A . PASS END=147091554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 147091555 . G . PASS END=147091560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 147091561 . T . PASS END=147091561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:15,0 chr1 147091562 . T . PASS END=147091562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 147091563 . T . PASS END=147091564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 147091565 . C . PASS END=147091565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 147091566 . T . PASS END=147091566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 147091567 . G . PASS END=147091589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:12:0,30,419:0,34,255:15,0 chr1 147091590 . T . PASS END=147091599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:9,0 chr1 147091600 . A . PASS END=147091625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,202:0,18,202:6,0 chr1 147091626 . G . PASS END=147091651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 147091652 . G . PASS END=147091660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 147091661 . G . PASS END=147091668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 147091669 . A . PASS END=147091670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 147091671 . C . PASS END=147091683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,291:0,30,255:10,0 chr1 147091684 . G . PASS END=147091684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 147091685 . G . PASS END=147091687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 147091688 . C . LowGQ END=147091688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr1 147091689 . G A, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.843;ReadPosRankSum=0.259;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,6,0:0.500,0.000:12:3,5,0:3,1,0:48:85,0,50,215,215,429:197,0,197:5,0:5.0000e+01,6.5233e-05,5.3000e+01,2.1461e+02,2.4932e+02,4.3220e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,3,3:2,4,4,2 chr1 147091690 . A . PASS END=147091706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:12,0 chr1 147091707 . A . PASS END=147091716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,505:0,45,255:16,0 chr1 147091717 . G . PASS END=147091717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 147091718 . G . PASS END=147091718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 147091719 . T . PASS END=147091719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 147091720 . C . PASS END=147091726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 147091727 . G . PASS END=147091734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 147091735 . T . PASS END=147091735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 147091736 . G . PASS END=147091746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 147091747 . G . PASS END=147091747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 147091748 . T . PASS END=147091751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 147091752 . A . PASS END=147091761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 147091762 . G . PASS END=147091874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,590:0,40,255:19,0 chr1 147091875 . G . PASS END=147091875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 147091876 . A . PASS END=147091902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr1 147091903 . G . PASS END=147091934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,63,255:24,0 chr1 147091935 . G . PASS END=147091940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,886:0,72,255:24,0 chr1 147091941 . G . PASS END=147091941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr1 147091942 . A . PASS END=147091946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 147091947 . T . PASS END=147091947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:22,0 chr1 147091948 . C . PASS END=147091969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr1 147091970 . A . PASS END=147091971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 147091972 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=0.675;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,15,0:0.577,0.000:26:8,6,0:3,9,0:48:85,0,49,535,387,923:255,0,255:7,0:5.0000e+01,7.2999e-05,5.1658e+01,4.5000e+02,4.2201e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,9,6:8,3,6,9 chr1 147091973 . C . PASS END=147091973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 147091974 . T . PASS END=147091976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 147091977 . G . PASS END=147092005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:21,0 chr1 147092006 . T . PASS END=147092006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 147092007 . T . PASS END=147092009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 147092010 . G . PASS END=147092070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,869:0,64,255:26,0 chr1 147092071 . G . PASS END=147092073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147092074 . C . PASS END=147092084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,982:0,68,255:26,0 chr1 147092085 . G . PASS END=147092085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 147092086 . T . PASS END=147092086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,877:0,76,255:29,0 chr1 147092087 . T . PASS END=147092091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr1 147092092 . A . PASS END=147092092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 147092093 . T . PASS END=147092103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:30,0 chr1 147092104 . G . PASS END=147092105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr1 147092106 . G . PASS END=147092120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1147:0,80,255:29,0 chr1 147092121 . C . PASS END=147092122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 147092123 . A . PASS END=147092123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,984:0,56,255:26,0 chr1 147092124 . T . PASS END=147092129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 147092130 . T . PASS END=147092130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:24,0 chr1 147092131 . G . PASS END=147092247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,856:0,66,255:26,0 chr1 147092248 . A . PASS END=147092256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:18,0 chr1 147092257 . C . PASS END=147092298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,806:0,63,255:26,0 chr1 147092299 . G . PASS END=147092365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1173:0,84,255:39,0 chr1 147092366 . A . PASS END=147092366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1164:0,67,255:35,0 chr1 147092367 . A . PASS END=147092460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1213:0,82,255:39,0 chr1 147092461 . G . PASS END=147092464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 147092465 . C . PASS END=147092466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147092467 . C . PASS END=147092471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 147092472 . T . PASS END=147092475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 147092476 . C . PASS END=147092496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,67,255:25,0 chr1 147092497 . T . PASS END=147092497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 147092498 . T . PASS END=147092530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,864:0,72,255:26,0 chr1 147092531 . C . PASS END=147092532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 147092533 . C . PASS END=147092574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:24:0,68,984:0,68,255:26,0 chr1 147092575 . C . PASS END=147092575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 147092576 . A . PASS END=147092625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:22:0,61,876:0,61,255:25,0 chr1 147092626 . C . PASS END=147092626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 147092627 . C . PASS END=147092665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:25,0 chr1 147092666 . C . PASS END=147092669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147092670 . T . PASS END=147092678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 147092679 . G . PASS END=147092681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147092682 . C . PASS END=147092683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 147092684 . C . PASS END=147092684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147092685 . C . PASS END=147092686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 147092687 . C . PASS END=147092691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147092692 . T . PASS END=147092706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 147092707 . G . PASS END=147092709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147092710 . T . PASS END=147092710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 147092711 . C . PASS END=147092711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr1 147092712 . A . PASS END=147092715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 147092716 . G . PASS END=147092717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147092718 . C . PASS END=147092748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr1 147092749 . T . PASS END=147092749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 147092750 . C . PASS END=147092760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 147092761 . A . PASS END=147092762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:21,0 chr1 147092763 . C . PASS END=147092766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 147092767 . T . PASS END=147092767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:19,0 chr1 147092768 . C . PASS END=147092775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 147092776 . C . PASS END=147092776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:20,0 chr1 147092777 . C . PASS END=147092785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:24,0 chr1 147092786 . A . PASS END=147092787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 147092788 . A . PASS END=147092796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 147092797 . A . PASS END=147092797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:20,0 chr1 147092798 . T . PASS END=147092801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 147092802 . T . PASS END=147092802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,626:0,3,255:16,0 chr1 147092803 . C . PASS END=147092821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:16:0,42,518:0,43,255:19,0 chr1 147092822 . T . PASS END=147092839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:12:0,31,413:0,31,255:13,0 chr1 147092840 . C . PASS END=147092840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 147092841 . C . PASS END=147092851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,397:0,36,255:12,0 chr1 147092852 . A . LowGQ END=147092853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:10,0 chr1 147092854 . G . PASS END=147092863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 147094072 . G . PASS END=147094074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 147094075 . G . PASS END=147094075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 147094076 . C . PASS END=147094077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 147094078 . C . PASS END=147094314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:30:0,80,1111:0,80,255:40,0 chr1 147094315 . C . PASS END=147094326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1030:0,68,255:26,0 chr1 147094327 . T . PASS END=147094331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 147094332 . G . PASS END=147094332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 147095643 . G . PASS END=147095646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 147095647 . G . PASS END=147095648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147095649 . G . PASS END=147095649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 147095650 . C . PASS END=147095671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1260:0,93,255:38,0 chr1 147095672 . A . PASS END=147095672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1235:0,67,255:36,0 chr1 147095673 . T . PASS END=147095794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:38:0,84,1260:0,98,255:40,0 chr1 147095795 . G . PASS END=147095795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1324:0,59,255:25,0 chr1 147095796 . G . PASS END=147095796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 147095797 . G . PASS END=147095825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,95,255:36,0 chr1 147095826 . A . PASS END=147095828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:35:0,78,1170:0,105,255:26,0 chr1 147095829 . A . PASS END=147095831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:28,0 chr1 147095832 . C . PASS END=147095833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:61:33:0,61,1170:0,61,255:26,0 chr1 147095834 . A . PASS END=147095870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1186:0,93,255:31,0 chr1 147095871 . C . PASS END=147095871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 147095872 . T . PASS END=147095885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 147095886 . G . PASS END=147095886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 147095887 . C . PASS END=147095900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1172:0,87,255:31,0 chr1 147095901 . T . PASS END=147095903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:30,0 chr1 147095904 . C . PASS END=147095914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:30,0 chr1 147095915 . T . PASS END=147095915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:27,0 chr1 147095916 . C . PASS END=147095918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 147095919 . C . PASS END=147095979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,922:0,62,255:26,0 chr1 147095980 . A . PASS END=147095980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 147095981 . G . PASS END=147095983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 147095984 . A . PASS END=147095984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr1 147095985 . T . PASS END=147095985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 147095986 . G . PASS END=147095986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 147095987 . G . PASS END=147096033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:23,0 chr1 147096034 . A . PASS END=147096034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 147096035 . A . PASS END=147096037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 147096038 . T . PASS END=147096044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:17,0 chr1 147096045 . A . PASS END=147096050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 147096051 . C . PASS END=147096092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,615:0,51,255:19,0 chr1 147096093 . C . PASS END=147096097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 147096098 . C . PASS END=147096109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,476:0,42,255:16,0 chr1 147096110 . A . PASS END=147096112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 147096113 . C . PASS END=147096178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,553:0,40,255:18,0 chr1 147096179 . T . PASS END=147096179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:16,0 chr1 147096180 . T . PASS END=147096210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 147096211 . G . PASS END=147096253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:24,0 chr1 147096254 . G . PASS END=147096254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 147096255 . G . PASS END=147096294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,62,255:24,0 chr1 147096295 . C . PASS END=147096323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:17:0,46,615:0,46,255:18,0 chr1 147096324 . C . PASS END=147096324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:15,0 chr1 147096325 . C . PASS END=147096325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 147096326 . A . PASS END=147096340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:19,0 chr1 147096341 . T . PASS END=147096342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 147096343 . A . PASS END=147096343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 147096344 . C . PASS END=147096346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 147096347 . G . PASS END=147096347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 147096348 . G . PASS END=147096350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 147096351 . T . PASS END=147096351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 147096352 . G . PASS END=147096357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,815:0,69,255:26,0 chr1 147096358 . T . PASS END=147096363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147096364 . G . PASS END=147096364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 147096365 . C . PASS END=147096365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:25,0 chr1 147096366 . C . PASS END=147096370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 147096371 . G . PASS END=147096371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 147096372 . G . PASS END=147096389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1157:0,93,255:33,0 chr1 147096390 . T . PASS END=147096390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:32,0 chr1 147096391 . T . PASS END=147096416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1440:0,102,255:35,0 chr1 147096417 . A . PASS END=147096417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:31,0 chr1 147096418 . C . PASS END=147096506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1271:0,81,255:39,0 chr1 147096507 . G . PASS END=147096507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 147096508 . C . PASS END=147096512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:28,0 chr1 147096513 . C . PASS END=147096528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr1 147096529 . T . PASS END=147096530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 147096531 . C . PASS END=147096542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 147096543 . T . PASS END=147096546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,836:0,53,255:20,0 chr1 147096547 . C . PASS END=147096560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr1 147096561 . A . PASS END=147096638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 147096639 . T . PASS END=147096659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 147096660 . T . PASS END=147096660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr1 147096661 . C . PASS END=147096663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 147096664 . G . PASS END=147096664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 147096665 . A . PASS END=147096666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 147096667 . C . PASS END=147096668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 147096669 . C . PASS END=147096675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 147096676 . G . PASS END=147096676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 147096677 . A . PASS END=147096701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,768:0,66,255:23,0 chr1 147096702 . A . PASS END=147096702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 147096703 . C . PASS END=147096720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 147096721 . T . PASS END=147096756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,657:0,41,255:19,0 chr1 147096757 . T . PASS END=147096760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 147102804 . T . PASS END=147102866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,171,255:40,0 chr1 147115402 . C . PASS END=147115419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,118,1800:0,118,255:40,0 chr1 147119225 . T . PASS END=147119226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 147119227 . A . PASS END=147119229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,964:0,70,255:29,0 chr1 147119230 . C . PASS END=147119230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 147119231 . T . PASS END=147119231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr1 147119232 . T . PASS END=147119235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 147119236 . T . PASS END=147119238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 147119239 . C . PASS END=147119239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 147119240 . A . PASS END=147119244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1013:0,90,255:32,0 chr1 147119245 . C . PASS END=147119247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 147119248 . T . PASS END=147119254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1151:0,80,255:32,0 chr1 147119255 . A . PASS END=147119255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:22:33:0,22,1056:0,22,255:30,0 chr1 147119256 . G . PASS END=147119272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1217:0,89,255:37,0 chr1 147119273 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=2.410;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:11,13,0:8,8,0:48:85,0,50,685,679,1365:255,0,255:17,0:5.0000e+01,6.5751e-05,5.2872e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,13,8:6,13,11,10 chr1 147119274 . T . PASS END=147119310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1330:0,87,255:40,0 chr1 147119311 . C . PASS END=147119350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:34:0,82,1260:0,82,255:40,0 chr1 147119351 . A . PASS END=147119351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:26,0 chr1 147119352 . C . PASS END=147119357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:28,0 chr1 147119358 . G . PASS END=147119358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 147119359 . G . PASS END=147119360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 147119361 . A . PASS END=147119361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 147119362 . C . PASS END=147119363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 147119364 . T . PASS END=147119365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 147119366 . C . PASS END=147119366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 147119367 . T . PASS END=147119367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 147119368 . C . PASS END=147119368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 147119979 . C . PASS END=147120181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:87:43:0,87,1305:0,108,255:40,0 chr1 147120182 . T . PASS END=147120182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1108:0,55,255:26,0 chr1 147120183 . C . PASS END=147120190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:31:0,84,1260:0,88,255:28,0 chr1 147120191 . G . PASS END=147120191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 147120192 . A . PASS END=147120193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 147120194 . C . PASS END=147120194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:27,0 chr1 147120195 . C . PASS END=147120195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147120196 . G . PASS END=147120202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:25,0 chr1 147120203 . G . PASS END=147120203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:19,0 chr1 147120204 . A . PASS END=147120206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:20,0 chr1 147120207 . C . PASS END=147120207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:20,0 chr1 147120208 . A . PASS END=147120213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:22:0,61,878:0,61,255:21,0 chr1 147121946 . C . PASS END=147121947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:23,0 chr1 147121948 . G . PASS END=147121950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 147121951 . C . PASS END=147121951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 147121952 . T . PASS END=147121971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,941:0,75,255:26,0 chr1 147121972 . G . PASS END=147121974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 147121975 . C . PASS END=147121976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 147121977 . C T, 133.82 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,20,0:0,9,0:84:172,87,0,1087,87,1087:255,87,0:0,0:1.3382e+02,8.3818e+01,0.0000e+00,4.5000e+02,1.1859e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,13:0,0,17,12 chr1 147121978 . G . PASS END=147121988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,928:0,70,255:26,0 chr1 147121989 . G . PASS END=147121989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147121990 . G . PASS END=147121991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 147121992 . T . PASS END=147121994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 147121995 . T . PASS END=147121995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 147121996 . C . PASS END=147121998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147121999 . T . PASS END=147122002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:26,0 chr1 147122003 . A . PASS END=147122003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:22,0 chr1 147122004 . T . PASS END=147122008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,931:0,65,255:24,0 chr1 147122009 . A . PASS END=147122010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:21,0 chr1 147122011 . G . PASS END=147122013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 147122014 . T . PASS END=147122014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 147122015 . G . PASS END=147122025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 147122026 . C . PASS END=147122026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,1 chr1 147122027 . A . PASS END=147122027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:1:23:0,1,660:0,1,255:20,1 chr1 147122028 . T . PASS END=147122028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,739:0,30,255:21,0 chr1 147122029 . C . PASS END=147122032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 147122033 . A . PASS END=147122033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 147122034 . G . PASS END=147122034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr1 147122035 . A . PASS END=147122035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 147122036 . C . PASS END=147122037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 147122038 . T . PASS END=147122040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 147122041 . C . PASS END=147122041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 147124252 . C . PASS END=147124267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,922:0,72,255:26,0 chr1 147124268 . G . PASS END=147124270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 147124271 . T . PASS END=147124271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 147124272 . G . PASS END=147124272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 147124273 . T . PASS END=147124309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1202:0,86,255:36,0 chr1 147124310 . T G, 47.94 PASS DP=36;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,15,0:0.417,0.000:36:10,8,0:11,7,0:47:83,0,50,520,722,1243:255,0,255:21,0:4.7940e+01,9.1637e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,7,11,4:11,10,12,3 chr1 147124311 . T . PASS END=147124347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:36:0,94,1147:0,94,255:40,0 chr1 147124348 . T . PASS END=147124352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr1 147124415 . T . PASS END=147124450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1305:0,99,255:40,0 chr1 147126309 . C . PASS END=147126441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:54:0,120,1800:0,138,255:40,0 chr1 147127276 . C . PASS END=147127286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,923:0,67,255:28,0 chr1 147127287 . C . PASS END=147127288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 147127289 . T . PASS END=147127289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr1 147127290 . C . PASS END=147127358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1172:0,83,255:32,0 chr1 147127359 . G . PASS END=147127363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr1 147131075 . C . PASS END=147131102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,116,1568:0,116,255:40,0 chr1 147131103 . C T, 48.65 PASS DP=43;MQ=250.00;MQRankSum=5.564;ReadPosRankSum=2.336;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,19,0:0.442,0.000:43:12,13,0:12,6,0:47:83,0,50,620,858,1478:255,0,255:23,0:4.8650e+01,8.1024e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,10,9:9,15,8,11 chr1 147131104 . A . PASS END=147131140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:39:0,84,1288:0,84,255:40,0 chr1 147131141 . T . PASS END=147131153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:37,0 chr1 147131154 . A . PASS END=147131154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:34,0 chr1 147131511 . A . PASS END=147131513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 147131514 . A . PASS END=147131514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:29,0 chr1 147131515 . C . PASS END=147131517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 147131518 . C . PASS END=147131518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:34,0 chr1 147131519 . C . PASS END=147131538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:35:0,98,1341:0,98,255:38,0 chr1 147131539 . A . PASS END=147131641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:37:0,87,1112:0,87,255:40,0 chr1 147131762 . C . PASS END=147131844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:34:0,92,1288:0,92,255:40,0 chr1 147131845 . A . PASS END=147131845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1203:0,67,255:35,0 chr1 147131846 . C . PASS END=147131873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1133:0,82,255:37,0 chr1 147131874 . T . PASS END=147131874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:29,0 chr1 147131875 . G . PASS END=147131879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:29,0 chr1 147131880 . T . PASS END=147131880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 147131881 . T . PASS END=147131882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 147131883 . C . PASS END=147131890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:24,0 chr1 147141952 . C . PASS END=147141971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 147141972 . G . PASS END=147141981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 147141982 . A . PASS END=147141982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 147141983 . C . PASS END=147142039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 147142040 . T . PASS END=147142042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 147142043 . A . PASS END=147142059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 147142060 . G . PASS END=147142060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 147142061 . G . PASS END=147142061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:12,0 chr1 147142062 . C . PASS END=147142067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 147142068 . G . PASS END=147142068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 147142069 . C . PASS END=147142079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 147142080 . G . PASS END=147142108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:16,0 chr1 147142109 . G . PASS END=147142147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 147142148 . A . PASS END=147142148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 147142149 . T . PASS END=147142149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 147142150 . G . PASS END=147142155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 147142156 . C . PASS END=147142163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr1 147142164 . T . LowGQ END=147142164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:28,0,244:5,0 chr1 147142165 . G . PASS END=147142170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 147229036 . G . PASS END=147229036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 147229084 . T . PASS END=147229084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 147229750 . T . PASS END=147229750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 147229762 . C . PASS END=147229762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 147229772 . T . PASS END=147229772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 147229906 . G . PASS END=147229906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 147229937 . G . PASS END=147229937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147230210 . G . PASS END=147230210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 147230224 . A . PASS END=147230224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr1 147230248 . C . PASS END=147230248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 147230270 . T . PASS END=147230744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:31:0,83,1111:0,83,255:40,0 chr1 147230745 . G . PASS END=147230745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:28,0 chr1 147230746 . G . PASS END=147230749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr1 147230750 . G . PASS END=147230750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 147230751 . G . PASS END=147230754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,89,255:29,0 chr1 147230755 . C . PASS END=147230759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 147230760 . C . PASS END=147230766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,995:0,84,255:28,0 chr1 147230767 . C . PASS END=147230778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,963:0,67,255:25,0 chr1 147230779 . A . PASS END=147230779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:24,0 chr1 147230780 . G . PASS END=147230796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,961:0,75,255:25,0 chr1 147230797 . C . PASS END=147230797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 147230798 . A . PASS END=147230866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 147230867 . G . PASS END=147230869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:21,0 chr1 147230870 . G . PASS END=147230890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 147230891 . G . PASS END=147230899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 147230900 . C . PASS END=147230900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 147230901 . A . PASS END=147230902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 147230903 . A . PASS END=147230944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,892:0,62,255:26,0 chr1 147230945 . G . PASS END=147230945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 147230946 . G . PASS END=147230956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 147230957 . C . PASS END=147230958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 147230959 . T . PASS END=147230959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,842:0,64,255:26,0 chr1 147230960 . C . PASS END=147230962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 147230963 . T . PASS END=147230970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:26,0 chr1 147230971 . G . PASS END=147230971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:23,0 chr1 147230972 . G . PASS END=147230986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:25,0 chr1 147230987 . A . PASS END=147230987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 147230988 . G . PASS END=147231002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,854:0,61,255:26,0 chr1 147231003 . T . PASS END=147231003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,750:0,47,255:23,0 chr1 147231004 . T . PASS END=147231007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 147231008 . C . PASS END=147231008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 147231009 . C . PASS END=147231009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:22,0 chr1 147231010 . T . PASS END=147231010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 147231011 . C . PASS END=147231011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 147231012 . T . PASS END=147231012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 147231013 . C . PASS END=147231013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 147231014 . G . PASS END=147231014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 147231015 . G . PASS END=147231016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 147231017 . C . PASS END=147231017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 147231018 . T . PASS END=147231021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,870:0,36,255:23,0 chr1 147231022 . G . PASS END=147231022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 147231023 . T . PASS END=147231027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:25:0,31,861:0,31,255:23,0 chr1 147231028 . T . PASS END=147231028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr1 147231029 . G . PASS END=147231031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 147231032 . C . PASS END=147231032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 147231033 . T . PASS END=147231035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,734:0,36,255:24,0 chr1 147231036 . T . PASS END=147231036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 147231037 . C . PASS END=147231044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,848:0,36,255:24,0 chr1 147231045 . C . PASS END=147231056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1047:0,71,255:26,0 chr1 147231057 . A . PASS END=147231057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,914:0,37,255:23,0 chr1 147231058 . T . PASS END=147231096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,62,255:25,0 chr1 147231097 . A . PASS END=147231098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,775:0,50,255:21,0 chr1 147231099 . A . PASS END=147231100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 147231101 . G . PASS END=147231101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 147231102 . A . PASS END=147231120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 147231121 . G . PASS END=147231132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1058:0,84,255:30,0 chr1 147231133 . T . PASS END=147231133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 147231134 . G . PASS END=147231139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 147231140 . A . PASS END=147231140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 147231141 . G . PASS END=147231186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1154:0,80,255:33,0 chr1 147231187 . A . PASS END=147231187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr1 147231188 . C . PASS END=147231236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1125:0,82,255:37,0 chr1 147231237 . A . PASS END=147231237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:37,0 chr1 147231238 . G . PASS END=147231346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:32:0,89,1119:0,89,255:39,0 chr1 147245373 . C . PASS END=147245373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 147245389 . C . PASS END=147245390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr1 147245430 . C . PASS END=147245430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr1 147245447 . G . PASS END=147245447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 147374956 . A . PASS END=147374956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 147380068 . T . PASS END=147380068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 147380083 . A . PASS END=147380109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:23,0 chr1 147380110 . A . PASS END=147380130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:29,0 chr1 147380131 . C . PASS END=147380132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 147380133 . C . PASS END=147380133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 147380134 . T . PASS END=147380134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 147380135 . C . PASS END=147380150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 147380151 . A . PASS END=147380151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 147380152 . G . PASS END=147380175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1088:0,90,255:30,0 chr1 147380176 . T . PASS END=147380176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 147380177 . T . PASS END=147380178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 147380179 . C . PASS END=147380179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 147380180 . G . PASS END=147380197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 147380198 . C . PASS END=147380199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 147380200 . G . PASS END=147380209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1164:0,83,255:28,0 chr1 147380210 . T . PASS END=147380211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 147380212 . G . PASS END=147380214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 147380215 . T . PASS END=147380215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 147380216 . G . PASS END=147380224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:29,0 chr1 147380225 . A . PASS END=147380225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 147380226 . G . PASS END=147380232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 147380233 . G . PASS END=147380233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 147380234 . A . PASS END=147380234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147380235 . C . PASS END=147380235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 147380236 . T . PASS END=147380236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 147380237 . T . PASS END=147380269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr1 147380270 . A . PASS END=147380270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:22,0 chr1 147380271 . C . PASS END=147380305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 147380306 . T . PASS END=147380306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr1 147380307 . T . PASS END=147380323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:24,0 chr1 147380324 . A . PASS END=147380324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 147380325 . G . PASS END=147380325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 147380326 . A . PASS END=147380367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,651:0,41,255:19,0 chr1 147380368 . G . PASS END=147380402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,405:0,36,255:13,0 chr1 147380403 . A . PASS END=147380403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:10,0 chr1 147380404 . A . PASS END=147380430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 147380431 . C . PASS END=147380431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 147380432 . A . PASS END=147380432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 147380433 . G . PASS END=147380433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 147380434 . G . PASS END=147380436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 147380437 . G . PASS END=147380437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 147380438 . G . PASS END=147380438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 147380439 . G . PASS END=147380451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 147380452 . C . PASS END=147380452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 147380453 . C . PASS END=147380453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 147380454 . G . PASS END=147380454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 147380455 . G . PASS END=147380459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 147380460 . G . PASS END=147380469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 147380470 . A . PASS END=147380489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,438:0,42,255:16,0 chr1 147380490 . A . PASS END=147380490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,483:0,34,255:16,0 chr1 147380491 . G . PASS END=147380506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 147380507 . G . PASS END=147380523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,825:0,63,255:26,0 chr1 147380524 . C . PASS END=147380524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 147380525 . T . PASS END=147380529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,962:0,78,255:26,0 chr1 147380530 . A . PASS END=147380609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1000:0,81,255:36,0 chr1 147380610 . G . PASS END=147380610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:32,0 chr1 147380611 . A . PASS END=147380666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1278:0,89,255:37,0 chr1 147380667 . C . PASS END=147380667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr1 147380668 . G . PASS END=147380704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:35:0,84,1260:0,94,255:37,0 chr1 147380705 . T . PASS END=147380705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:27,0 chr1 147380706 . C . PASS END=147380707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 147380708 . T . PASS END=147380708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:27,0 chr1 147380709 . G . PASS END=147380715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1170:0,83,255:29,0 chr1 147380716 . G . PASS END=147380716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 147380717 . T . PASS END=147380720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 147380721 . C . PASS END=147380721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 147380722 . T . PASS END=147380724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 147380725 . G . PASS END=147380772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,892:0,61,255:27,0 chr1 147380773 . G . PASS END=147380773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 147380774 . G . PASS END=147380785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr1 147380786 . C . PASS END=147380786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 147380787 . C . PASS END=147380787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:27,2 chr1 147380788 . T . PASS END=147380788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,955:0,21,255:27,2 chr1 147380789 . T . PASS END=147380789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr1 147380790 . G . PASS END=147380790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 147380791 . A . PASS END=147380794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:23,0 chr1 147380795 . G . PASS END=147380795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:24,0 chr1 147380796 . G . PASS END=147380812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 147380813 . T . PASS END=147380813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,1 chr1 147380814 . G . PASS END=147380815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:27:0,45,951:0,45,255:26,1 chr1 147380816 . G . PASS END=147380821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 147380822 . T . PASS END=147380845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:31,0 chr1 147380846 . T . PASS END=147380846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 147380847 . T . PASS END=147380865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1156:0,93,255:31,0 chr1 147380866 . A . PASS END=147380866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 147380867 . A . PASS END=147380891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:32,0 chr1 147380892 . A . PASS END=147380892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 147380893 . G . PASS END=147380895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1103:0,90,255:30,0 chr1 147380896 . G . PASS END=147380897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 147380898 . G . PASS END=147380898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 147380899 . A . PASS END=147380899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 147380900 . A . PASS END=147380911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 147380912 . A . PASS END=147380938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,67,255:26,0 chr1 147380939 . T . PASS END=147380940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 147380941 . G . PASS END=147380988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 147380989 . A . PASS END=147380990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 147380991 . G . PASS END=147380992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 147380993 . T . PASS END=147381038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,675:0,44,255:19,0 chr1 147381039 . A . PASS END=147381039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 147381040 . C . PASS END=147381077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,662:0,47,255:19,0 chr1 147381078 . G . PASS END=147381144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,764:0,61,255:26,0 chr1 147381145 . A . PASS END=147381293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:28:0,80,1003:0,80,255:39,0 chr1 147381294 . C . PASS END=147381294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:28,0 chr1 147381295 . T . PASS END=147381317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1233:0,89,255:35,0 chr1 147381318 . T . PASS END=147381318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:31,0 chr1 147381319 . G . PASS END=147381335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:31:0,81,1215:0,92,255:34,0 chr1 147381336 . G . PASS END=147381336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 147381337 . C . PASS END=147381337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 147381338 . T . PASS END=147381340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:29:0,60,1053:0,60,255:25,0 chr1 147381341 . G . PASS END=147381342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:25,0 chr1 147381343 . A . PASS END=147381345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,976:0,70,255:26,0 chr1 147381346 . G . PASS END=147381346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:24,0 chr1 147381347 . C . PASS END=147381347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 147381348 . C . PASS END=147381351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:23,0 chr1 147381352 . A . PASS END=147381360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:24:0,45,675:0,62,255:18,0 chr1 147381361 . A . PASS END=147381361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:14,0 chr1 147381362 . G . PASS END=147381364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,720:0,41,255:17,0 chr1 147381365 . C . PASS END=147381365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:16,0 chr1 147381366 . A . PASS END=147381369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:42:24:0,42,630:0,55,255:17,0 chr1 147381370 . G . PASS END=147381370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,653:0,22,255:11,0 chr1 147381371 . A . PASS END=147381375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,450:0,30,255:12,0 chr1 147381376 . A . PASS END=147381376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:24:23:0,24,360:0,38,255:7,0 chr1 147381377 . C . PASS END=147381379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:12:22:0,12,180:0,16,255:4,0 chr1 147381380 . T . LowGQ END=147381384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:0:19:0,0,45:0,0,255:3,0 chr1 147383610 . G . PASS END=147383613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:101:0,120,1800:0,255,255:40,0 chr1 147400650 . A . PASS END=147400691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:39:0,96,1435:0,96,255:40,0 chr1 147408741 . A . PASS END=147408800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:87:0,120,1800:0,202,255:40,0 chr1 147410828 . A . PASS END=147410828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 147410829 . T . PASS END=147410829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 147410830 . A . PASS END=147410831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,636:0,54,255:18,0 chr1 147410832 . G . PASS END=147410832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 147410833 . T . PASS END=147410850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:19,0 chr1 147410851 . G . PASS END=147410853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 147410854 . C . PASS END=147410862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,554:0,40,255:19,0 chr1 147410863 . G . PASS END=147410869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,579:0,60,255:20,0 chr1 147410870 . G . PASS END=147410870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr1 147410871 . C . PASS END=147410873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 147410874 . T . PASS END=147410874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 147410875 . T . PASS END=147410882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 147410883 . C . PASS END=147410897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:20:0,49,648:0,49,255:19,0 chr1 147410898 . T . PASS END=147410898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:7:21:0,7,576:0,7,255:17,0 chr1 147410899 . C . PASS END=147410899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 147410900 . A . PASS END=147410900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:17,0 chr1 147410901 . T . PASS END=147410909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,721:0,47,255:18,0 chr1 147410910 . T . PASS END=147410910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr1 147410911 . C . PASS END=147410913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr1 147410914 . A . PASS END=147410914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 147410915 . G . PASS END=147410931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,562:0,51,255:18,0 chr1 147415552 . C . PASS END=147415658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:36:0,94,1347:0,94,255:40,0 chr1 147416091 . T . PASS END=147416093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 147416094 . T . PASS END=147416111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr1 147416112 . G . PASS END=147416114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr1 147416115 . T . PASS END=147416115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 147416116 . A . PASS END=147416116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 147416117 . A . PASS END=147416118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr1 147416119 . C . PASS END=147416133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 147416134 . T . PASS END=147416134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 147416135 . C . PASS END=147416139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 147416140 . C . PASS END=147416208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:18,0 chr1 147416209 . C . PASS END=147416212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 147425577 . G . LowDepth;LowGQ END=147425697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147426554 . G . LowDepth;LowGQ END=147426634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147438786 . G . LowDepth;LowGQ END=147438895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147440564 . C . LowDepth;LowGQ END=147440619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147441107 . A . LowDepth;LowGQ END=147441195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147442099 . G . LowDepth;LowGQ END=147442191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147458431 . G . LowDepth;LowGQ END=147458526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147460664 . G . LowDepth;LowGQ END=147460753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147464734 . T . LowDepth;LowGQ END=147464799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147464943 . G . LowDepth;LowGQ END=147465149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147576173 . T . LowDepth;LowGQ END=147576189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147576820 . C . LowDepth;LowGQ END=147576928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147577643 . C . LowDepth;LowGQ END=147577649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147577650 . G . LowGQ END=147577811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,39:0,0,39:3,0 chr1 147578466 . C . LowDepth;LowGQ END=147578517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147579227 . T . LowDepth;LowGQ END=147579399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147579996 . C . LowDepth;LowGQ END=147580047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147580767 . C . PASS END=147580790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 147580791 . T . LowGQ END=147580791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 147580792 . A . PASS END=147580792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 147580793 . C . LowGQ END=147580793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr1 147580794 . G . PASS END=147580802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 147580803 . C . PASS END=147580803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 147580804 . C . PASS END=147580813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,433:0,36,255:12,0 chr1 147580814 . A . PASS END=147580814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 147580815 . A . PASS END=147580815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 147580816 . G . PASS END=147580816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 147580817 . G . PASS END=147580830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 147580831 . C . PASS END=147580845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 147580846 . C . PASS END=147580854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:10:0,15,225:0,30,255:6,0 chr1 147580855 . A . LowGQ END=147580855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:6,0 chr1 147580856 . T . PASS END=147580863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:6,0 chr1 147580864 . A . PASS END=147580864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 147580865 . G . PASS END=147580867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,217:4,0 chr1 147580868 . G . PASS END=147580879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 147580880 . C . PASS END=147580927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 147580928 . T . PASS END=147580939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:3,0 chr1 147581571 . C . PASS END=147581585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 147581586 . T . PASS END=147581605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,53,255:19,0 chr1 147581606 . T . PASS END=147581606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 147581607 . T . PASS END=147581608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 147581609 . A . PASS END=147581609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 147581610 . T . PASS END=147581622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:16,0 chr1 147581649 . T . PASS END=147581662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 147581663 . T . PASS END=147581670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 147581671 . G . PASS END=147581698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 147582665 . T . LowDepth;LowGQ END=147582828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147586724 . C . LowDepth;LowGQ END=147586775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147588076 . C . LowDepth;LowGQ END=147588281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147588746 . C . LowDepth;LowGQ END=147588818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147589855 . C . LowDepth;LowGQ END=147590069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147590903 . C . LowDepth;LowGQ END=147591005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147592784 . T . LowDepth;LowGQ END=147592993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147594338 . C . LowDepth;LowGQ END=147594549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147595012 . C . PASS END=147595020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 147595021 . G . PASS END=147595021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 147595022 . A . PASS END=147595035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 147595036 . T . PASS END=147595040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 147595041 . A . PASS END=147595041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:9,0 chr1 147595042 . T G, 33.02 PASS DP=10;MQ=24.47;MQRankSum=1.568;ReadPosRankSum=2.383;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,6,0:0.600,0.000:10:3,4,0:1,2,0:23:68,0,21,207,85,292:195,0,81:4,0:3.3021e+01,2.0662e-02,2.3719e+01,2.0661e+02,1.2018e+02,2.9500e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,0,6,0:3,1,4,2 chr1 147595043 . C . PASS END=147595043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 147595044 . C . PASS END=147595053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 147595054 . T . PASS END=147595055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 147595056 . A . PASS END=147595070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 147595071 . A . PASS END=147595079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 147595080 . A . PASS END=147595083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,333:0,27,255:9,0 chr1 147595084 . T . PASS END=147595084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 147596136 . C . LowDepth;LowGQ END=147596350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147597182 . C . PASS END=147597265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,115,1800:0,115,255:40,0 chr1 147597266 . T . PASS END=147597284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:45:0,80,1588:0,80,255:40,0 chr1 147599112 . T . LowDepth;LowGQ END=147599321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147607951 . C . LowDepth;LowGQ END=147608077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147954850 . T . LowDepth;LowGQ END=147955125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 147955140 . G . LowDepth;LowGQ END=147955209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148005403 . C . PASS END=148005406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 148005407 . G . LowGQ END=148005407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 148005408 . G . PASS END=148005417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr1 148005418 . T . PASS END=148005418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 148005419 . T . PASS END=148005422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:4,0 chr1 148005423 . A . LowGQ END=148005423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr1 148005424 . T . PASS END=148005424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,178:4,0 chr1 148005425 . C . LowGQ END=148005425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr1 148005426 . T . PASS END=148005427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 148005428 . C . LowGQ END=148005428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 148005429 . T . PASS END=148005430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 148005431 . C . LowGQ END=148005431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 148005432 . C . PASS END=148005432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 148005433 . C . LowGQ END=148005433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 148005434 . C . PASS END=148005448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 148005449 . T . LowGQ END=148005449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 148005450 . T . PASS END=148005453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 148005454 . C . LowGQ END=148005454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 148005455 . T . PASS END=148005468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,80:0,12,80:4,0 chr1 148005469 . C . LowGQ END=148005469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 148005470 . T . PASS END=148005485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 148005486 . C . LowGQ END=148005486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,70:27,0,96:3,0 chr1 148005487 . T . PASS END=148005488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 148005489 . C . LowGQ END=148005490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 148005491 . C . PASS END=148005497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 148005498 . C . LowGQ END=148005511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,100:0,0,103:3,0 chr1 148006226 . C . PASS END=148006235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 148006236 . A . PASS END=148006236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 148006237 . A . PASS END=148006285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 148006286 . A . PASS END=148006286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 148006287 . G . PASS END=148006293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 148006294 . C . PASS END=148006294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 148006295 . A . PASS END=148006306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:8,0 chr1 148006307 . G . PASS END=148006307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 148006308 . T . PASS END=148006324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 148006325 . G . PASS END=148006330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:6,0 chr1 148006331 . A . PASS END=148006331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:4,0 chr1 148006332 . A . PASS END=148006333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr1 148006334 . A . LowDepth;LowGQ END=148006398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 148011680 . C . PASS END=148011704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,442:0,45,255:16,0 chr1 148011705 . C . LowGQ END=148011705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,302:19,0,255:12,0 chr1 148011706 . T . PASS END=148011707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 148011708 . C . LowGQ END=148011708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,380:2,0,255:13,0 chr1 148011709 . C . PASS END=148011709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,487:0,48,255:16,0 chr1 148011710 . C . PASS END=148011711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,446:0,31,255:15,0 chr1 148011712 . T . PASS END=148011713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 148011714 . C . PASS END=148011714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,427:0,15,255:14,0 chr1 148011715 . T . PASS END=148011717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 148011718 . T . PASS END=148011718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 148011719 . C . PASS END=148011721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 148011722 . C . PASS END=148011722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:13,0 chr1 148011723 . C . PASS END=148011723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,427:0,15,255:12,0 chr1 148011724 . C . PASS END=148011726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,438:0,31,255:13,0 chr1 148011727 . T . PASS END=148011727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 148011728 . C . PASS END=148011728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,431:0,31,255:13,0 chr1 148011729 . T . PASS END=148011729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 148011730 . T . PASS END=148011730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 148011731 . C . PASS END=148011731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,490:0,17,255:13,0 chr1 148011732 . T . PASS END=148011732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 148011733 . T . PASS END=148011734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,459:0,25,255:13,0 chr1 148011735 . C . PASS END=148011735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 148011736 . C . PASS END=148011736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 148011737 . T . PASS END=148011738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 148011739 . C . PASS END=148011739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 148011740 . T . PASS END=148011745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 148011746 . C . PASS END=148011746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 148011747 . T . PASS END=148011754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 148011755 . C . PASS END=148011756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 148011757 . T . PASS END=148011757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 148011758 . C . PASS END=148011761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 148011762 . T . PASS END=148011763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 148011764 . T . PASS END=148011764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 148011765 . T . PASS END=148011770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 148011771 . T . PASS END=148011771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 148011772 . C . PASS END=148011775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 148011776 . T . PASS END=148011776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr1 148011777 . T . PASS END=148011780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:11,0 chr1 148011781 . T . PASS END=148011781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 148011782 . T . PASS END=148011782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 148011783 . C . PASS END=148011783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr1 148011784 . A . PASS END=148011784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 148011785 . A . PASS END=148011785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 148011786 . T . LowGQ END=148011786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,241:14,0,255:9,0 chr1 148011787 . T . PASS END=148011787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 148011788 . T . PASS END=148011788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 148012503 . C . LowDepth;LowGQ END=148012675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148014854 . C . PASS END=148014867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr1 148014868 . G . PASS END=148014868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 148014869 . T . PASS END=148014899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,149:5,0 chr1 148014900 . C . PASS END=148014905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 148016409 . C . PASS END=148016460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,132,255:40,0 chr1 148021577 . C . PASS END=148021628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,202,255:40,0 chr1 148023597 . C . PASS END=148023606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 148023607 . A . PASS END=148023608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 148023609 . G . PASS END=148023615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,751:0,47,255:19,0 chr1 148023616 . G . PASS END=148023617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 148023618 . A . PASS END=148023658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:19,0 chr1 148023659 . G . PASS END=148023659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 148023660 . T . PASS END=148023665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 148023666 . T . PASS END=148023667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 148023668 . T . PASS END=148023669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 148024711 . C . PASS END=148024766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:33,0 chr1 148024767 . T . PASS END=148024767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1088:0,55,255:30,0 chr1 148024768 . C . PASS END=148024804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1191:0,86,255:40,0 chr1 148024805 . C . PASS END=148024841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:82:39:0,82,1402:0,82,255:40,0 chr1 148024842 . C A, 2.54 DRAGENSnpHardQUAL DP=39;MQ=17.21;MQRankSum=-1.077;ReadPosRankSum=4.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:29,10,0:0.256,0.000:39:16,4,0:13,6,0:4:34,0,29,342,1037,1379:254,0,255:28,0:2.5431e+00,3.5366e+00,3.5537e+01,3.4514e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,16,4,6:16,13,6,4 chr1 148024843 . G . PASS END=148024880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1303:0,93,255:38,0 chr1 148024881 . T . PASS END=148024881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 148024882 . G . PASS END=148024886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 148024887 . A . PASS END=148024887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 148024888 . G . PASS END=148024902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1017:0,87,255:29,0 chr1 148024903 . C T, 1.85 DRAGENSnpHardQUAL DP=29;MQ=18.32;MQRankSum=-0.458;ReadPosRankSum=-1.857;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:23,6,0:0.207,0.000:29:13,1,0:10,5,0:5:32,0,29,214,794,1008:145,0,255:23,0:1.8509e+00,4.5993e+00,3.6599e+01,2.1909e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,15,2,4:10,13,3,3 chr1 148024904 . G . PASS END=148024904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 148024905 . T . PASS END=148024925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,951:0,65,255:26,0 chr1 148201967 . T . LowDepth;LowGQ END=148202278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148202279 . C . LowDepth END=148202461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr1 148251922 . T . PASS END=148251970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:93:59:0,93,1800:0,93,255:40,0 chr1 148251971 . G . LowGQ END=148251971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,7:77:0:77:0,0,2418:10,0,255:40,0 chr1 148251972 . T . PASS END=148251975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,170,255:40,0 chr1 148251976 . G . PASS END=148251976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,5:74:51:74:0,51,2382:0,51,255:40,0 chr1 148251977 . T . PASS END=148252011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:72:0,120,1800:0,186,255:40,0 chr1 148252012 . G . PASS END=148252048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:90:0,120,1800:0,255,255:40,0 chr1 148252049 . A C, 13.23 PASS DP=93;MQ=38.33;MQRankSum=-5.589;ReadPosRankSum=2.068;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:66,26,0:0.283,0.000:92:33,13,0:33,13,0:13:48,0,45,930,2344,3274:255,0,255:40,0:1.3235e+01,2.1134e-01,4.8411e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,37,16,10:34,32,13,13 chr1 148252050 . G . PASS END=148252110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:70:0,120,1800:0,204,255:40,0 chr1 148252111 . C T, 33.07 PASS DP=71;MQ=47.03;MQRankSum=-5.723;ReadPosRankSum=-1.206;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,31,0:0.443,0.000:70:23,15,0:16,16,0:33:68,0,46,1051,1392,2443:255,0,255:32,0:3.3073e+01,2.1921e-03,4.9302e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,24,17,14:19,20,13,18 chr1 148252112 . G . PASS END=148252118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,143,255:40,0 chr1 148252730 . C . PASS END=148252740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr1 148252741 . T . PASS END=148252776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,99,1368:0,99,255:40,0 chr1 148252777 . T . PASS END=148252777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:20:51:0,20,1598:0,20,255:40,8 chr1 148252778 . C . LowGQ END=148252778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:0:51:0,0,1562:2,0,255:40,0 chr1 148252779 . T . PASS END=148252810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:43:0,102,1530:0,112,255:40,0 chr1 148252811 . T . PASS END=148252811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1502:0,74,255:32,0 chr1 148252812 . T . PASS END=148252828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1141:0,82,255:29,0 chr1 148252829 . T . PASS END=148252829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 148252830 . T . PASS END=148252831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 148252832 . T . PASS END=148252833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:26,0 chr1 148252834 . A . PASS END=148252835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 148252836 . T . PASS END=148252836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,970:0,60,255:25,0 chr1 148252837 . T . PASS END=148252837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,917:0,32,255:25,0 chr1 148252838 . T . PASS END=148252838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr1 148253553 . C . LowDepth;LowGQ END=148253725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148254380 . C . LowDepth;LowGQ END=148254431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148255141 . T . LowDepth;LowGQ END=148255313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148255922 . C . LowDepth;LowGQ END=148255973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148256693 . C . LowDepth;LowGQ END=148256865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148258317 . C . LowDepth;LowGQ END=148258489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148259144 . C . LowDepth;LowGQ END=148259195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148263904 . C . LowDepth;LowGQ END=148263955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148264665 . T . LowDepth;LowGQ END=148264837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148267018 . C . LowDepth;LowGQ END=148267126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148267841 . C . LowDepth;LowGQ END=148268013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148268676 . C . LowDepth;LowGQ END=148268727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148269437 . T . LowDepth;LowGQ END=148269609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148270218 . C . LowDepth;LowGQ END=148270269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148270989 . C . LowDepth;LowGQ END=148271161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148271792 . C . LowDepth;LowGQ END=148271900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148272615 . C . LowDepth;LowGQ END=148272787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148273448 . C . LowDepth;LowGQ END=148273499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148274209 . T . LowDepth;LowGQ END=148274381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148274982 . C . LowDepth;LowGQ END=148275033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148278210 . C . LowDepth;LowGQ END=148278261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148279747 . C . LowDepth;LowGQ END=148279855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148280570 . C . LowDepth;LowGQ END=148280704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148280705 . C . LowDepth;LowGQ END=148280742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148281403 . C . LowDepth;LowGQ END=148281454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148282164 . T . LowDepth;LowGQ END=148282336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148286133 . C . LowDepth;LowGQ END=148286241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148286956 . C . LowDepth;LowGQ END=148287090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148287091 . C . LowDepth;LowGQ END=148287128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148287789 . C . LowDepth;LowGQ END=148287840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148290102 . C . LowDepth;LowGQ END=148290274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148290903 . C . LowDepth;LowGQ END=148291011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148291726 . C . LowDepth;LowGQ END=148291860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148291861 . C . LowDepth;LowGQ END=148291898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148292559 . C . LowDepth;LowGQ END=148292610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148294872 . C . LowDepth;LowGQ END=148295044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148295673 . C . LowDepth;LowGQ END=148295781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148296496 . C . LowDepth;LowGQ END=148296630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148296631 . C . LowDepth;LowGQ END=148296668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148297329 . C . LowDepth;LowGQ END=148297380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148298090 . T . LowDepth;LowGQ END=148298262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148299642 . C . LowDepth;LowGQ END=148299814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148300443 . C . LowDepth;LowGQ END=148300551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148304402 . C . LowDepth;LowGQ END=148304574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148305203 . C . LowDepth;LowGQ END=148305311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148306026 . C . LowDepth;LowGQ END=148306198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148306859 . C . LowDepth;LowGQ END=148306910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148307620 . T . LowDepth;LowGQ END=148307792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148308405 . C . LowDepth;LowGQ END=148308456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148310800 . C . LowDepth;LowGQ END=148310972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 148313167 . C . LowDepth;LowGQ END=148313218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148314739 . C . LowDepth;LowGQ END=148314847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148315562 . C . LowDepth;LowGQ END=148315696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148315697 . C . LowDepth;LowGQ END=148315734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148316393 . C . LowDepth;LowGQ END=148316444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148317939 . C . PASS END=148317990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 148324259 . C . LowDepth;LowGQ END=148324367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148325082 . C . LowDepth;LowGQ END=148325254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148325915 . C . LowDepth;LowGQ END=148325966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148326676 . T . LowDepth;LowGQ END=148326848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148327449 . C . LowDepth;LowGQ END=148327500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148328220 . C . LowDepth;LowGQ END=148328249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148328250 . G . LowGQ END=148328392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:2,0 chr1 148329030 . C . LowDepth END=148329081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 148330323 . T . LowDepth;LowGQ END=148330362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148334195 . C . LowDepth;LowGQ END=148334246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148337318 . C . LowDepth;LowGQ END=148337532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148342470 . C . PASS END=148342489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,100,1800:0,100,255:40,0 chr1 148342490 . C . PASS END=148342490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:64:60:0,64,2019:0,64,255:40,0 chr1 148342491 . A . PASS END=148342499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,164,255:40,0 chr1 148342500 . G . PASS END=148342500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:58:61:0,58,1992:0,58,255:40,0 chr1 148342501 . C . PASS END=148342542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:62:0,120,1800:0,147,255:40,0 chr1 148577650 . A . LowDepth;LowGQ END=148577824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr1 148579606 . A . PASS END=148579624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1210:0,86,255:40,0 chr1 148579625 . T . PASS END=148579625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1390:0,68,255:38,0 chr1 148579626 . C . PASS END=148579635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,111,1665:0,120,255:40,0 chr1 148579636 . T C, 0.18 DRAGENSnpHardQUAL DP=46;MQ=26.44;MQRankSum=-2.880;ReadPosRankSum=0.498;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:37,9,0:0.196,0.000:46:18,5,0:19,4,0:14:21,0,30,130,130,130:211,0,255:36,0:1.7806e-01,1.3963e+01,4.7296e+01,1.4429e+02,1.7906e+02,1.4730e+02:0.00,34.77,37.78,34.77,69.54,37.78:31,6,9,0:18,19,5,4 chr1 148579637 . T . PASS END=148579673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,134,255:40,0 chr1 148579674 . C . PASS END=148579708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,149,255:40,0 chr1 148580540 . G . PASS END=148580581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,127:0,15,127:6,0 chr1 148580582 . C . PASS END=148580582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 148580583 . C . PASS END=148580585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,182:6,0 chr1 148580586 . T . PASS END=148580586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 148580587 . T . PASS END=148580605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 148580606 . A . PASS END=148580606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 148580607 . G . PASS END=148580678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr1 148580679 . C . PASS END=148580679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:3,0 chr1 148580680 . A . PASS END=148580697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 148580698 . A . LowGQ END=148580698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,62:5,0,66:3,0 chr1 148580699 . A . PASS END=148580707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 148580708 . T . PASS END=148580713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,139:3,0 chr1 148580714 . G . PASS END=148580721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:4,0 chr1 148580722 . T . LowGQ END=148580754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,72:0,0,72:3,0 chr1 148581796 . A . LowGQ END=148581868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,6,72:3,0 chr1 148582333 . G . PASS END=148582375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 148582376 . C . PASS END=148582388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:18,0 chr1 148582389 . C . PASS END=148582389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 148582390 . C . PASS END=148582406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,524:0,40,255:19,0 chr1 148582407 . G . PASS END=148582408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 148582409 . C . PASS END=148582411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 148582412 . G . PASS END=148582418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 148582419 . A . PASS END=148582419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 148582420 . T . PASS END=148582420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:27,0 chr1 148582421 . G . PASS END=148582423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 148582424 . T . PASS END=148582424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:28,0 chr1 148582425 . C . PASS END=148582425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 148582426 . C . PASS END=148582426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 148582427 . A . PASS END=148582437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1087:0,82,255:33,0 chr1 148582438 . T . PASS END=148582474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:34:0,83,1280:0,83,255:40,0 chr1 148582475 . G A, 20.01 PASS DP=41;MQ=16.32;MQRankSum=1.943;ReadPosRankSum=2.908;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,20,0:0.488,0.000:41:9,9,0:12,11,0:20:55,0,26,155,155,155:255,0,255:21,0:2.0013e+01,4.8977e-02,2.9049e+01,1.5478e+02,1.8955e+02,1.5779e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,14,9,11:9,12,12,8 chr1 148582476 . A . PASS END=148582512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:42:0,87,1438:0,87,255:40,0 chr1 148582513 . G . PASS END=148582538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,103,1745:0,103,255:40,0 chr1 148583826 . A . LowGQ END=148583877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,45:0,0,55:2,0 chr1 148587788 . G . LowDepth;LowGQ END=148587951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148588994 . G . PASS END=148589015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,181,255:40,0 chr1 148589016 . A . PASS END=148589045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:89:0,118,1800:0,118,255:40,0 chr1 148589661 . G . LowDepth;LowGQ END=148589806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 148589807 . G . PASS END=148589814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:5,0 chr1 148589815 . T . LowGQ END=148589815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 148589816 . T . PASS END=148589833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 148590553 . A . PASS END=148590604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 148591201 . G . PASS END=148591205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:3,0 chr1 148591206 . G . PASS END=148591254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 148591255 . G . PASS END=148591269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 148591270 . A . LowGQ END=148591270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:6,0 chr1 148591271 . A . PASS END=148591337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,225:0,21,225:7,0 chr1 148591338 . A . PASS END=148591358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,155:0,12,155:6,0 chr1 148591359 . C . PASS END=148591361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 148591362 . T . PASS END=148591373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,100:3,0 chr1 148592083 . G . LowDepth END=148592134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 148592791 . G . PASS END=148592800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 148592801 . G . PASS END=148592803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:11,0 chr1 148592804 . C . PASS END=148592806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:15,0 chr1 148592807 . C G, 0.50 DRAGENSnpHardQUAL DP=15;MQ=7.62;MQRankSum=0.072;ReadPosRankSum=0.505;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:12,3,0:0.200,0.000:15:6,2,0:6,1,0:10:26,0,14,78,388,467:49,0,255:12,0:4.9599e-01,9.7546e+00,2.6755e+01,8.8248e+01,4.3274e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,1,3,0:7,5,2,1 chr1 148592808 . T . PASS END=148592810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 148592811 . A . PASS END=148592811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 148592812 . G . PASS END=148592827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,644:0,41,255:19,0 chr1 148592828 . G . PASS END=148592837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:23,0 chr1 148592838 . A . PASS END=148592838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 148592839 . C . PASS END=148592844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 148592845 . G . PASS END=148592856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,864:0,64,255:24,0 chr1 148592857 . T . PASS END=148592857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 148592858 . T . PASS END=148592867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 148592868 . C . PASS END=148592868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 148592869 . C . PASS END=148592917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,744:0,63,255:24,0 chr1 148592918 . T . PASS END=148592918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 148592919 . A . PASS END=148592932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 148592933 . A . PASS END=148592949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 148592950 . T . PASS END=148592950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:13,0 chr1 148592951 . C . PASS END=148592954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,38,255:12,0 chr1 148592955 . A . PASS END=148592963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 148593678 . A . PASS END=148593678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 148593679 . A . LowGQ END=148593679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 148593680 . A . PASS END=148593683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 148593684 . A . LowGQ END=148593696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,78:0,0,82:3,0 chr1 148593697 . G . PASS END=148593703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 148593704 . A . LowGQ END=148593704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,84:5,0,88:3,0 chr1 148593705 . A . PASS END=148593707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:4,0 chr1 148593708 . G . LowGQ END=148593708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 148593709 . A . PASS END=148593710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 148593711 . G . LowGQ END=148593711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 148593712 . G . PASS END=148593712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 148593713 . G . LowGQ END=148593713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 148593714 . G . PASS END=148593716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 148593717 . G . LowGQ END=148593717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 148593718 . A . PASS END=148593718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 148593719 . A . LowGQ END=148593719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,70:5,0,74:3,0 chr1 148593720 . G . PASS END=148593727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 148593728 . A . LowGQ END=148593728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,123:2,0,124:4,0 chr1 148593729 . A . PASS END=148593751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 148593752 . G . LowGQ END=148593753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr1 148593754 . A . PASS END=148593755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 148593756 . G . LowGQ END=148593756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 148593757 . G . PASS END=148593762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 148593763 . T . LowGQ END=148593763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr1 148593764 . G . PASS END=148593765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr1 148593766 . C . LowGQ END=148593783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,78:0,0,72:3,0 chr1 148594397 . G . PASS END=148594563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:38:0,105,1575:0,114,255:40,0 chr1 148594564 . T . PASS END=148594564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1377:0,76,255:37,0 chr1 148594565 . G . PASS END=148594591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:38:0,83,1145:0,83,255:39,0 chr1 148594592 . G . PASS END=148594593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:38:0,78,1170:0,83,255:26,0 chr1 148594594 . C . PASS END=148594595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,114,255:27,0 chr1 148594596 . A . PASS END=148594596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 148594597 . G . PASS END=148594597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 148594598 . T . PASS END=148594628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,62,255:26,1 chr1 148594629 . T . PASS END=148594640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:21:0,50,765:0,50,255:19,0 chr1 148644086 . A . LowDepth;LowGQ END=148644198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 148644199 . T . LowDepth;LowGQ END=148644232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,11:3,0 chr1 148644233 . G . PASS END=148644284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 148644285 . T . PASS END=148644305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 148644306 . G A, 0.02 DRAGENSnpHardQUAL DP=9;MQ=15.37;MQRankSum=-0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:3,1,0:5,0,0:23:12,0,26,36,286,322:12,0,255:8,0:2.1153e-02,2.3141e+01,5.2141e+01,5.8869e+01,3.4398e+02,3.4794e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,0,1:6,2,0,1 chr1 148644307 . T . PASS END=148644311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 148644312 . A . PASS END=148644343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:11,0 chr1 148644344 . A . PASS END=148644356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,380:0,33,255:12,0 chr1 148644357 . A . LowGQ END=148644357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 148644358 . G . PASS END=148644364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 148644365 . G . PASS END=148644369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 148644370 . T . PASS END=148644370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 148644371 . G . PASS END=148644378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 148644379 . G . PASS END=148644386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 148644387 . C . PASS END=148644387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 148644388 . A . PASS END=148644397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr1 148644398 . C . PASS END=148644398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 148644399 . C . PASS END=148644407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 148644408 . A G, 79.73 PASS DP=19;MQ=17.73;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,7,0:0,12,0:54:118,57,0,705,57,705:255,21,0:1,0:7.9726e+01,5.3726e+01,1.8379e-05,4.5000e+02,8.8496e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,7:0,0,8,11 chr1 148644409 . T . PASS END=148644411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 148644412 . T . PASS END=148644412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 148644413 . T . PASS END=148644413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 148644414 . C . PASS END=148644414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 148644415 . C . PASS END=148644420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 148644421 . T . PASS END=148644421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 148644422 . T . PASS END=148644429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 148644430 . T . PASS END=148644431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 148644432 . C . PASS END=148644437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 148644438 . A . PASS END=148644438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 148644439 . G . PASS END=148644444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 148644445 . G . PASS END=148644445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 148644446 . T . PASS END=148644467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 148644468 . C . PASS END=148644468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 148644469 . G . PASS END=148644474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 148644475 . C . PASS END=148644487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 148644488 . C . PASS END=148644495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 148644496 . T . PASS END=148644496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 148644497 . A . PASS END=148644509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:16,0 chr1 148644510 . C . PASS END=148644510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 148644511 . G . PASS END=148644518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:15,0 chr1 148644519 . T . PASS END=148644520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 148644521 . G . PASS END=148644524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 148644525 . A . PASS END=148644525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:13,0 chr1 148644526 . C . PASS END=148644531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr1 148644532 . T . PASS END=148644532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:12,0 chr1 148644533 . A . LowGQ END=148644533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,449:10,0,255:11,0 chr1 148644534 . G . PASS END=148644534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 148644535 . C . PASS END=148644535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 148644536 . A . PASS END=148644541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 148644542 . A . PASS END=148644542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 148644543 . G . PASS END=148644561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 148644562 . T . PASS END=148644564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 148644565 . C . PASS END=148644566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 148644567 . G . PASS END=148644572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 148644573 . A . PASS END=148644573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:8,0 chr1 148644574 . A . PASS END=148644580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:7,0 chr1 148752601 . A . LowDepth;LowGQ END=148752652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148754835 . G . PASS END=148754851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:6,0 chr1 148754852 . T . PASS END=148754857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,155:3,0 chr1 148754858 . T C, 33.19 PASS DP=4;MQ=23.43;MQRankSum=0.727;ReadPosRankSum=0.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,3,0:0.750,0.000:4:1,3,0:0,0,0:6:67,0,2,107,35,142:104,0,27:0,0:3.3193e+01,1.2024e+00,6.1732e+00,1.0848e+02,7.0864e+01,1.4637e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,0,3:1,0,0,3 chr1 148754859 . A . LowGQ END=148754896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:2,0 chr1 148754897 . A G, 5.47 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=1.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4674e+00,4.4674e+00,4.4577e+00,4.0239e+01,3.9237e+01,4.3239e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,1,0 chr1 148754898 . T . PASS END=148754919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 148754920 . C . PASS END=148754934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 148754935 . T . PASS END=148754945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 148754946 . C . LowGQ END=148754946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:24,0,132:4,0 chr1 148754947 . T . PASS END=148754959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 148754960 . T . LowGQ END=148754960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,100:2,0,102:4,0 chr1 148754961 . T . PASS END=148754971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 148754972 . A . LowGQ END=148754972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr1 148754973 . G . PASS END=148754974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 148754975 . A . LowGQ END=148754976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 148754977 . A . PASS END=148754979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 148754980 . C . LowGQ END=148754980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 148754981 . A . PASS END=148754991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 148754992 . T . LowGQ END=148754992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 148754993 . C . PASS END=148754998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 148754999 . A . PASS END=148755007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 148756550 . C . PASS END=148756556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 148756557 . G . PASS END=148756562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:8,0 chr1 148756563 . T . PASS END=148756565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 148756566 . T . PASS END=148756579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 148756580 . G . PASS END=148756606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,194:0,18,194:6,0 chr1 148756608 . T . PASS END=148756615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 148756616 . A G, 0.17 DRAGENSnpHardQUAL DP=6;MQ=11.55;MQRankSum=0.736;ReadPosRankSum=-0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:5,1,0:0.167,0.000:6:5,0,0:0,1,0:14:21,0,11,36,176,212:21,0,168:4,0:1.7439e-01,1.4221e+01,2.8211e+01,4.9993e+01,2.2534e+02,2.2934e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,1,0:0,5,0,1 chr1 148756617 . G . PASS END=148756620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:5,0 chr1 148756621 . T . PASS END=148756628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,149:3,0 chr1 148756629 . T . PASS END=148756646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr1 148756647 . A . PASS END=148756647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr1 148756648 . C T, 23.33 PASS DP=5;MQ=11.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:61,15,0,191,15,191:194,15,0:0,0:2.3331e+01,1.2331e+01,2.8318e-01,1.8867e+02,4.7101e+01,1.9167e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,5:0,0,1,4 chr1 148756649 . C . PASS END=148756649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 148756650 . T . PASS END=148756663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:3:0,3,45:0,9,116:3,0 chr1 148756664 . G T, 15.43 PASS DP=3;MQ=11.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,3,0:1.000,0.000:3:0,2,0:0,1,0:4:51,5,0,151,151,151:116,9,0:0,0:1.5429e+01,4.4285e+00,2.1421e+00,1.5020e+02,1.8497e+02,1.5321e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,3:0,0,1,2:148756664 chr1 148756665 . G T, 15.43 PASS DP=3;MQ=11.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,3,0:1.000,0.000:3:0,2,0:0,1,0:4:51,5,0,151,151,151:116,9,0:0,0:1.5429e+01,4.4285e+00,2.1421e+00,1.5020e+02,1.8497e+02,1.5321e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,3:0,0,1,2:148756664 chr1 148756666 . A . PASS END=148756683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,31:0,3,31:1,0 chr1 148756684 . A G, 0.03 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=11.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:0,1,0:1.000,0.000:1:0,1,0:0,0,0:22:12,1,0,112,112,112:39,3,0:0,0:2.5785e-02,2.4585e+01,2.6125e+01,1.3480e+02,1.6957e+02,1.3781e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,1:0,0,0,1:148756684 chr1 148806129 . G . LowDepth;LowGQ END=148806434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 148864672 . A . PASS END=148864705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,203,255:40,0 chr1 148864706 . T . PASS END=148864742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:67:0,120,1800:0,167,255:40,0 chr1 148864743 . G A, 12.54 PASS DP=68;MQ=20.78;MQRankSum=2.187;ReadPosRankSum=2.952;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,19,0:0.279,0.000:68:26,7,0:23,12,0:13:47,0,31,651,1701,2352:255,0,255:40,0:1.2539e+01,2.5094e-01,3.3918e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,37,8,11:23,26,6,13 chr1 148864744 . C . PASS END=148864780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,109,1770:0,109,255:40,0 chr1 148864781 . C . PASS END=148864875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:37:0,80,1282:0,80,255:40,0 chr1 148864876 . T . PASS END=148864891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1183:0,86,255:34,0 chr1 148864892 . C . PASS END=148864911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,870:0,62,255:26,0 chr1 148864912 . G . PASS END=148864912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:22,0 chr1 148864913 . C A, 14.96 PASS DP=26;MQ=18.93;MQRankSum=0.809;ReadPosRankSum=3.815;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,7,0:0.269,0.000:26:11,2,0:8,5,0:15:50,0,29,222,677,898:171,0,255:17,0:1.4958e+01,1.4366e-01,3.2144e+01,2.2167e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,14,3,4:7,12,6,1 chr1 148864914 . T . PASS END=148864914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 148864915 . G . PASS END=148864920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 148864921 . A . PASS END=148864921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 148864922 . A . PASS END=148864922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:22,0 chr1 148864923 . G . PASS END=148864942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,909:0,62,255:26,0 chr1 148864943 . G . PASS END=148864943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 148864944 . G . PASS END=148864949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 148864950 . C . PASS END=148864950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 148864951 . C . PASS END=148864979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,47,255:19,0 chr1 148864980 . T . PASS END=148864996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,32,255:13,0 chr1 148864997 . G . PASS END=148864998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 148864999 . C . PASS END=148865004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr1 148865005 . C . PASS END=148865005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 148865006 . A . PASS END=148865018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 148865019 . C . LowGQ END=148865019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:6,0 chr1 148865020 . G . PASS END=148865020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 148865021 . A . PASS END=148865026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 148865027 . A . PASS END=148865027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 148865028 . G . PASS END=148865029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 148865534 . G . PASS END=148865577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:368,1:369:99:317:0,120,1800:0,255,255:40,1 chr1 149224195 . A . PASS END=149224213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:241,10:251:99:238:0,120,1800:0,255,255:40,0 chr1 149230779 . T . PASS END=149230790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 149230791 . C . PASS END=149230809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:23,0 chr1 149230810 . A . PASS END=149230810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 149230811 . G . PASS END=149230877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,847:0,63,255:26,0 chr1 149230878 . G . PASS END=149230906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:18,0 chr1 149230907 . A . PASS END=149230918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 149230919 . C . PASS END=149230919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149230920 . T . PASS END=149230922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 149230923 . G . PASS END=149230948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 149230949 . G . PASS END=149230949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 149230950 . T . PASS END=149230952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 149230953 . G . PASS END=149230953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 149230954 . C . PASS END=149230956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 149230957 . C . PASS END=149230960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:16:0,35,585:0,35,255:13,0 chr1 149230961 . G . PASS END=149230961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 149230962 . A . PASS END=149230965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,535:0,31,255:13,0 chr1 149230966 . T . PASS END=149230971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 149230972 . C . PASS END=149230980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:14:0,32,565:0,32,255:13,0 chr1 149230981 . G . PASS END=149230981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 149230982 . T . PASS END=149230982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149230983 . G . PASS END=149230984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 149230985 . C . PASS END=149230986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 149230987 . C . PASS END=149230989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149230990 . T . PASS END=149230990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 149230991 . C . PASS END=149230991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149230992 . A . PASS END=149231002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149231003 . G . PASS END=149231003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 149231004 . A . PASS END=149231010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 149231011 . A . PASS END=149231033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,325:0,27,255:9,0 chr1 149231034 . G . PASS END=149231034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 149231035 . G . PASS END=149231036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 149231037 . C . PASS END=149231037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 149231038 . T . PASS END=149231038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 149231039 . G . PASS END=149231039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 149231040 . C . PASS END=149231099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 149231100 . A . PASS END=149231104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr1 149231105 . T . PASS END=149231105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:3,0 chr1 149231106 . G . PASS END=149231109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:4,0 chr1 149231540 . C . PASS END=149231609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,184,255:40,0 chr1 149239900 . A . PASS END=149239929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:85:0,120,1800:0,254,255:40,0 chr1 149239930 . C . PASS END=149239970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:102:0,120,1800:0,255,255:40,0 chr1 149239971 . G C, 5.67 DRAGENSnpHardQUAL DP=127;MQ=153.85;MQRankSum=-2.469;ReadPosRankSum=3.552;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:112,15,0:0.118,0.000:127:60,8,0:52,7,0:6:39,0,47,147,147,147:200,0,255:40,0:5.6690e+00,1.3733e+00,5.1373e+01,1.4836e+02,1.8313e+02,1.5137e+02:0.00,34.77,37.78,34.77,69.54,37.78:57,55,3,12:55,57,8,7 chr1 149239972 . C . PASS END=149239972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,1:126:99:126:0,120,1800:0,255,255:40,0 chr1 149239973 . T G, 2.62 DRAGENSnpHardQUAL DP=127;MQ=153.76;MQRankSum=-3.719;ReadPosRankSum=3.702;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:98,29,0:0.228,0.000:127:53,15,0:45,14,0:3:34,0,47,147,147,147:255,0,255:40,0:2.6168e+00,3.4431e+00,5.3443e+01,1.5043e+02,1.8520e+02,1.5344e+02:0.00,34.77,37.78,34.77,69.54,37.78:53,45,7,22:50,48,13,16:149239973 chr1 149239974 . C . PASS END=149239995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:116:0,120,1800:0,255,255:40,0 chr1 149239996 . G C, 21.62 PASS DP=121;MQ=140.25;MQRankSum=-5.593;ReadPosRankSum=0.576;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:101,20,0:0.165,0.000:121:52,10,0:49,10,0:22:56,0,47,156,156,156:255,0,255:40,0:2.1620e+01,3.0057e-02,5.0030e+01,1.5639e+02,1.9116e+02,1.5940e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,75,5,15:45,56,7,13:149239973 chr1 149239997 . A . PASS END=149240005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:115:0,120,1800:0,255,255:40,0 chr1 149240006 . G A, 1.60 DRAGENSnpHardQUAL DP=115;MQ=137.06;MQRankSum=-5.886;ReadPosRankSum=1.277;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:98,16,0:0.140,0.000:114:50,8,0:48,8,0:5:31,0,50,568,3486,4054:255,0,255:40,0:1.6032e+00,5.1049e+00,5.8105e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:40,58,4,12:46,52,6,10:149239973 chr1 149240007 . A . PASS END=149240045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:93:0,120,1800:0,255,255:40,0 chr1 149240046 . C . PASS END=149240077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,191,255:40,0 chr1 149242322 . A . PASS END=149242358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:87:0,120,1800:0,235,255:40,0 chr1 149242359 . G . PASS END=149242395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:102:0,120,1800:0,255,255:40,0 chr1 149242396 . A G, 17.54 PASS DP=99;MQ=175.46;MQRankSum=-6.638;ReadPosRankSum=5.285;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:78,21,0:0.212,0.000:99:27,9,0:51,12,0:18:52,0,50,751,2790,3541:255,0,255:40,0:1.7536e+01,7.7298e-02,5.3077e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,45,8,13:42,36,10,11 chr1 149242397 . A . PASS END=149242424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:94:0,120,1800:0,242,255:40,0 chr1 149245050 . G . PASS END=149245078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,174,255:40,0 chr1 149245079 . C G, 4.28 DRAGENSnpHardQUAL DP=100;MQ=76.41;MQRankSum=-1.490;ReadPosRankSum=2.957;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:84,16,0:0.160,0.000:100:42,9,0:42,7,0:4:37,0,46,563,2983,3545:255,0,255:40,0:4.2797e+00,2.0293e+00,5.0929e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:52,32,12,4:48,36,7,9 chr1 149245080 . T . PASS END=149245116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:100:0,120,1800:0,255,255:40,0 chr1 149245117 . G . PASS END=149245216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,0:134:99:118:0,120,1800:0,255,255:40,0 chr1 149245217 . A . PASS END=149245253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:84:0,120,1800:0,232,255:40,0 chr1 149245254 . A G, 0.12 DRAGENSnpHardQUAL DP=84;MQ=67.19;MQRankSum=-3.924;ReadPosRankSum=2.553;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:73,10,0:0.120,0.000:83:33,5,0:40,5,0:16:19,0,45,358,2610,2968:152,0,255:40,0:1.1848e-01,1.5700e+01,6.4150e+01,3.7323e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,50,3,7:39,34,4,6 chr1 149245255 . A . PASS END=149245285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,165,255:40,0 chr1 149250519 . A . PASS END=149250554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:232,1:233:99:208:0,120,1800:0,255,255:40,7 chr1 149250555 . A . PASS END=149250591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:235,1:236:99:219:0,120,1800:0,255,255:40,0 chr1 149250592 . G C, 26.74 PASS DP=216;MQ=48.65;MQRankSum=-12.066;ReadPosRankSum=7.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:133,83,0:0.384,0.000:216:73,37,0:60,46,0:27:62,0,45,2911,4609,7520:255,0,255:40,0:2.6742e+01,9.2771e-03,4.7884e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:54,79,25,58:60,73,45,38 chr1 149254297 . A . PASS END=149254299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:109:0,120,1800:0,255,255:40,0 chr1 149254300 . A . PASS END=149254335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:110:0,120,1800:0,255,255:40,0 chr1 149254336 . T . LowGQ END=149254336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,9:110:0:110:0,0,3438:10,0,255:40,0 chr1 149254337 . C T, 46.90 PASS DP=110;MQ=89.39;MQRankSum=2.787;ReadPosRankSum=6.714;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,58,0:0.527,0.000:110:27,32,0:25,26,0:44:82,0,44,182,182,182:255,0,255:40,0:4.6900e+01,1.8405e-04,4.6582e+01,1.8167e+02,2.1644e+02,1.8468e+02:0.00,34.77,37.78,34.77,69.54,37.78:29,23,34,24:24,28,24,34 chr1 149254338 . C . PASS END=149254361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:96:0,120,1800:0,255,255:40,0 chr1 149379160 . C . PASS END=149379199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 149379200 . G . PASS END=149379201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 149379202 . C . PASS END=149379212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 149379213 . C . PASS END=149379220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 149379222 . C . PASS END=149379234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 149379235 . G . PASS END=149379236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 149379238 . C . PASS END=149379251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 149379252 . C . PASS END=149379252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 149379253 . A . PASS END=149379256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 149379257 . G . PASS END=149379274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr1 149379275 . C . PASS END=149379281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 149379282 . T . PASS END=149379282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 149379283 . G . PASS END=149379283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149379284 . G . PASS END=149379307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:18,0 chr1 149379308 . G . PASS END=149379320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,648:0,60,255:20,0 chr1 149379321 . G . PASS END=149379326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 149379327 . G . PASS END=149379339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,686:0,60,255:20,0 chr1 149379340 . C . PASS END=149379340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr1 149379341 . G . PASS END=149379342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,683:0,60,255:21,0 chr1 149379343 . T . PASS END=149379343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,495:0,29,255:19,0 chr1 149379344 . T . PASS END=149379344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 149379345 . C . PASS END=149379345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,585:0,43,255:19,0 chr1 149379346 . G . LowGQ END=149379346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,426:78,0,255:16,0 chr1 149379347 . C . PASS END=149379348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 149379349 . G . PASS END=149379349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,624:0,49,255:21,0 chr1 149379350 . C . PASS END=149379350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 149379351 . A . PASS END=149379351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 149379352 . G . PASS END=149379352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,601:0,10,255:20,0 chr1 149379353 . C . PASS END=149379353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 149379354 . T . PASS END=149379356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,740:0,66,255:22,0 chr1 149379357 . G . PASS END=149379357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 149379358 . C . PASS END=149379364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:25,0 chr1 149379365 . G . PASS END=149379365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:23,0 chr1 149379366 . C . PASS END=149379366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 149379367 . C . PASS END=149379368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 149379369 . A . PASS END=149379369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,844:0,48,255:25,0 chr1 149379370 . A . PASS END=149379371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 149379372 . C . PASS END=149379372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:3:27:0,3,742:0,3,255:25,0 chr1 149379373 . C . PASS END=149379374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 149379375 . A . PASS END=149379375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,769:0,50,255:24,0 chr1 149379376 . G . PASS END=149379378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:25,0 chr1 149379379 . A . PASS END=149379379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,809:0,48,255:23,0 chr1 149379380 . G . PASS END=149379380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 149379381 . A . LowGQ END=149379381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,658:8,0,255:22,0 chr1 149379382 . A . PASS END=149379385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:25,0 chr1 149379386 . A . PASS END=149379386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:24,0 chr1 149379387 . T . PASS END=149379387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,773:0,75,255:25,0 chr1 149379388 . T . PASS END=149379388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 149379389 . T . PASS END=149379389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 149379390 . G . PASS END=149379390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:23,0 chr1 149379391 . C . PASS END=149379399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,909:0,67,255:25,0 chr1 149379400 . A . PASS END=149379400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,859:0,12,255:20,0 chr1 149379401 . G . PASS END=149379403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr1 149379404 . T . PASS END=149379404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:21,0 chr1 149379405 . G . PASS END=149379407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:22,0 chr1 149379408 . G . PASS END=149379408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,847:0,48,255:23,0 chr1 149379409 . G . PASS END=149379413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,847:0,69,255:23,0 chr1 149379414 . A . PASS END=149379414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,755:0,38,255:22,0 chr1 149379415 . G . PASS END=149379415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 149379416 . A . PASS END=149379416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:21,0 chr1 149379417 . A . PASS END=149379418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 149379419 . T . PASS END=149379419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 149379420 . G . PASS END=149379421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149379422 . G . PASS END=149379422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 149379423 . C . PASS END=149379433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 149379434 . G . PASS END=149379434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 149379435 . G . PASS END=149379440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 149379441 . A . PASS END=149379442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 149379443 . C . PASS END=149379444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149379445 . A . PASS END=149379445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 149379446 . C . PASS END=149379446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149379447 . G . PASS END=149379447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 149379448 . G . PASS END=149379455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 149379456 . C . PASS END=149379456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:22,0 chr1 149379457 . G . PASS END=149379472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,908:0,72,255:26,0 chr1 149379473 . G . PASS END=149379477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 149379478 . C . PASS END=149379482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 149379483 . T . PASS END=149379483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:27,0 chr1 149379484 . T . PASS END=149379486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 149379487 . T . PASS END=149379492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 149379493 . A . PASS END=149379503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 149379504 . T . PASS END=149379517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,972:0,70,255:26,0 chr1 149379518 . C . PASS END=149379521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 149379522 . A . PASS END=149379522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 149379523 . A . PASS END=149379524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 149379525 . T . PASS END=149379525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 149379526 . C . PASS END=149379544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,978:0,81,255:30,0 chr1 149379545 . C . PASS END=149379545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 149379546 . G . PASS END=149379562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1164:0,93,255:35,0 chr1 149379563 . A . PASS END=149379563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:32,0 chr1 149379564 . A . PASS END=149379656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1170:0,83,255:40,1 chr1 149379657 . C . PASS END=149379693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:50:0,120,1800:0,132,255:40,0 chr1 149379694 . C T, 36.94 PASS DP=49;MQ=54.15;MQRankSum=-0.633;ReadPosRankSum=4.324;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,18,0:0.367,0.000:49:15,8,0:16,10,0:37:72,0,46,599,1093,1691:255,0,255:27,0:3.6940e+01,9.3873e-04,4.8601e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,18,9,9:17,14,7,11 chr1 149379695 . G . PASS END=149379724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,116,1560:0,116,255:40,0 chr1 149379725 . A . PASS END=149379725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1454:0,77,255:40,0 chr1 149379726 . C . PASS END=149379734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,116,255:40,0 chr1 149379735 . T . PASS END=149379739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,105,1575:0,123,255:39,0 chr1 149379740 . G . PASS END=149379759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,102,1530:0,111,255:39,0 chr1 149379760 . A . PASS END=149379760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:31,0 chr1 149379761 . G . PASS END=149379774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,89,255:33,0 chr1 149379775 . G . PASS END=149379779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr1 149379780 . C T, 41.13 PASS DP=33;MQ=56.48;MQRankSum=-4.029;ReadPosRankSum=2.349;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,22,0:0.667,0.000:33:8,12,0:3,10,0:38:76,0,38,706,390,1096:255,0,255:7,0:4.1126e+01,6.8551e-04,4.0933e+01,4.5000e+02,4.2482e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,9,11,11:5,6,9,13 chr1 149379781 . T . PASS END=149379807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 149379808 . G . PASS END=149379817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,810:0,53,255:19,0 chr1 149379818 . C . PASS END=149379855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:18,0 chr1 149379856 . C . PASS END=149379856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 149379857 . A . PASS END=149379869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 149379870 . G . PASS END=149379874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 149379875 . C . PASS END=149379875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 149379876 . A . PASS END=149379885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 149379886 . C . PASS END=149379887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 149379888 . G . PASS END=149379891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 149379892 . G . PASS END=149379892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 149379893 . G . PASS END=149379916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,441:0,36,255:13,0 chr1 149379917 . C . LowGQ END=149379917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 149379918 . C . PASS END=149379918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 149379919 . C . PASS END=149379947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 149379948 . T . PASS END=149379948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 149379949 . C . PASS END=149379950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 149380491 . C . PASS END=149380524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:47:0,89,1460:0,89,255:40,0 chr1 149400132 . T . PASS END=149400139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 149400140 . G . PASS END=149400140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:25,0 chr1 149400141 . C . PASS END=149400142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 149400143 . C . PASS END=149400163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:31,0 chr1 149400164 . A . PASS END=149400164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,916:0,60,255:29,0 chr1 149400165 . C . PASS END=149400169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 149400170 . T . PASS END=149400170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 149400171 . G . PASS END=149400542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:32:0,89,1302:0,89,255:40,0 chr1 149676070 . A . PASS END=149676074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:5,0 chr1 149676075 . G A, 49.53 PASS DP=6;MQ=28.18;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,6,0:1.000,0.000:6:0,5,0:0,1,0:15:87,18,0,231,18,231:233,18,0:0,0:4.9525e+01,1.5192e+01,1.3353e-01,2.2859e+02,4.9962e+01,2.3159e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,2:0,0,5,1 chr1 149676076 . T . PASS END=149676077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:5:0,12,180:0,15,186:6,0 chr1 149676078 . T . PASS END=149676098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 149676099 . G . PASS END=149676110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 149676111 . C . PASS END=149676112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 149676113 . A . PASS END=149676125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 149676126 . C . PASS END=149676128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:17,1 chr1 149676129 . T . PASS END=149676136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr1 149676137 . C . PASS END=149676161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:26,0 chr1 149676162 . G . PASS END=149676162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 149676163 . C . PASS END=149676226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:28:0,80,1163:0,80,255:40,0 chr1 149676227 . T . PASS END=149676263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:75:0,120,1800:0,198,255:40,0 chr1 149676264 . T C, 1.55 DRAGENSnpHardQUAL DP=94;MQ=56.64;MQRankSum=-4.171;ReadPosRankSum=5.649;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:75,19,0:0.202,0.000:94:44,7,0:31,12,0:5:31,0,46,680,2590,3270:255,0,255:40,0:1.5481e+00,5.2310e+00,5.3781e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:49,26,11,8:46,29,13,6 chr1 149676265 . A . PASS END=149676301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:94:0,120,1800:0,255,255:40,0 chr1 149676302 . A . PASS END=149676363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:124,0:124:99:104:0,120,1800:0,255,255:40,0 chr1 149676364 . G . PASS END=149676400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:102:0,120,1800:0,255,255:40,0 chr1 149676401 . A G, 38.91 PASS DP=105;MQ=53.23;MQRankSum=-4.114;ReadPosRankSum=5.972;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:61,44,0:0.419,0.000:105:30,31,0:31,13,0:38:74,0,45,1537,2112,3648:255,0,255:40,0:3.8914e+01,6.2571e-04,4.8051e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,36,11,33:28,33,16,28 chr1 149676402 . G . PASS END=149676438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:91:0,120,1800:0,255,255:40,0 chr1 149676439 . A . PASS END=149676470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:50:0,117,1755:0,134,255:40,0 chr1 149676471 . C . PASS END=149676491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1215:0,105,255:38,0 chr1 149676492 . T . PASS END=149676507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr1 149676508 . A T, 34.36 PASS DP=24;MQ=27.71;MQRankSum=1.417;ReadPosRankSum=3.433;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,14,0:0.609,0.000:23:4,7,0:5,7,0:22:69,0,19,501,314,814:255,0,255:8,0:3.4361e+01,2.7179e-02,2.2312e+01,4.5000e+02,3.4851e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,9,5,9:5,4,6,8 chr1 149676509 . C . PASS END=149676518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,715:0,63,255:21,0 chr1 149676519 . A . PASS END=149676531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 149676532 . A G, 34.35 PASS DP=20;MQ=27.98;MQRankSum=1.225;ReadPosRankSum=-0.127;FractionInformativeReads=0.950;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,12,0:0.632,0.000:19:3,5,0:4,7,0:25:69,0,22,421,250,671:255,0,214:7,0:3.4348e+01,1.4843e-02,2.5165e+01,4.2109e+02,2.8505e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,7,4,8:4,3,5,7 chr1 149676533 . T . PASS END=149676537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 149676538 . A . PASS END=149676543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:18,0 chr1 149676544 . C . PASS END=149676544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:13,0 chr1 149676545 . C . PASS END=149676548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,44,255:13,0 chr1 149676549 . C . PASS END=149676550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:15,0 chr1 149676551 . T . PASS END=149676567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 149676568 . A . PASS END=149676572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 149676573 . G . PASS END=149676573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 149676574 . G C, 34.34 PASS DP=11;MQ=26.15;MQRankSum=0.278;ReadPosRankSum=-0.278;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,7,0:0.636,0.000:11:2,3,0:2,4,0:31:69,0,30,246,143,389:238,0,122:3,0:3.4337e+01,3.5623e-03,3.3453e+01,2.4591e+02,1.7783e+02,3.9197e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,4,1,6:2,2,3,4 chr1 149676575 . C . PASS END=149676579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 149698419 . T . PASS END=149698423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:83:0,120,1800:0,200,255:40,0 chr1 149698424 . A G, 14.91 PASS DP=84;MQ=41.23;MQRankSum=-3.678;ReadPosRankSum=0.056;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:62,22,0:0.262,0.000:84:27,13,0:35,9,0:15:50,0,43,779,2126,2905:255,0,255:40,0:1.4905e+01,1.4281e-01,4.5768e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:37,25,14,8:34,28,9,13 chr1 149698425 . C . PASS END=149698461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:83:0,120,1800:0,211,255:40,0 chr1 149698462 . T . PASS END=149698503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,0:125:99:107:0,120,1800:0,255,255:40,0 chr1 149698504 . G . PASS END=149698540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:133,0:133:99:126:0,120,1800:0,255,255:40,0 chr1 149698541 . C T, 16.19 PASS DP=113;MQ=36.51;MQRankSum=-2.899;ReadPosRankSum=5.853;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:82,31,0:0.274,0.000:113:43,19,0:39,12,0:16:51,0,43,1109,2896,4004:255,0,255:40,0:1.6193e+01,1.0573e-01,4.5981e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:38,44,11,20:47,35,19,12 chr1 149698542 . G . PASS END=149698578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:79:0,120,1800:0,221,255:40,0 chr1 149698579 . A . PASS END=149698606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,111,1665:0,141,255:40,0 chr1 149699768 . C . PASS END=149699768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 149699769 . T . PASS END=149699810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:32:0,91,1173:0,91,255:40,0 chr1 149699811 . T . PASS END=149699819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:41:0,110,1527:0,110,255:40,0 chr1 149700916 . C . PASS END=149700932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1233:0,89,255:35,0 chr1 149700933 . G . PASS END=149700933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 149700934 . C . PASS END=149700965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1302:0,89,255:40,0 chr1 149700966 . A . PASS END=149701002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:45:0,119,1667:0,119,255:40,0 chr1 149701003 . A T, 29.01 PASS DP=72;MQ=38.39;MQRankSum=-6.779;ReadPosRankSum=3.246;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,42,0:0.592,0.000:71:10,22,0:19,20,0:29:64,0,41,1473,1037,2511:255,0,255:29,0:2.9006e+01,5.6458e-03,4.3783e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,27,15:19,10,21,21 chr1 149701004 . G . PASS END=149701040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:71:0,120,1800:0,206,255:40,0 chr1 149701041 . G . PASS END=149701085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:89:0,120,1800:0,247,255:40,0 chr1 149701086 . A . PASS END=149701122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:67:0,120,1800:0,191,255:40,0 chr1 149701123 . C A, 25.67 PASS DP=65;MQ=25.44;MQRankSum=1.121;ReadPosRankSum=2.712;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,24,0:0.369,0.000:65:19,15,0:22,9,0:26:60,0,39,853,1463,2316:255,0,255:34,0:2.5670e+01,1.2040e-02,4.2345e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,24,10,14:21,20,13,11 chr1 149754300 . A . PASS END=149754330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:35:0,83,1181:0,83,255:38,0 chr1 149754726 . T . PASS END=149754746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:5,0 chr1 149754789 . C . PASS END=149754816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,116:3,0 chr1 149755556 . T . PASS END=149755770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:80:31:0,80,1074:0,80,255:40,0 chr1 149755771 . C . PASS END=149755781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,74,255:26,0 chr1 149755782 . A . PASS END=149755784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 149755785 . T . PASS END=149755785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:22,0 chr1 149755786 . G . PASS END=149755796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,68,255:24,0 chr1 149755797 . G . PASS END=149755797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 149755798 . C . PASS END=149755799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 149755800 . G . PASS END=149755806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,778:0,55,255:19,0 chr1 149755807 . C . PASS END=149755807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:2:22:0,2,673:0,2,255:16,0 chr1 149755808 . A . PASS END=149755813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,50,255:18,0 chr1 149759922 . G . PASS END=149760162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1194:0,86,255:40,0 chr1 149760163 . C . PASS END=149760163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:32,0 chr1 149760164 . A . PASS END=149760167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,89,255:31,0 chr1 149760168 . T . PASS END=149760168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:26,0 chr1 149760169 . G . PASS END=149760171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:28,0 chr1 149760172 . A . PASS END=149760173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 149761610 . A . PASS END=149761829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:34:0,87,1305:0,99,255:40,0 chr1 149761830 . C . PASS END=149761830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 149761831 . G . PASS END=149761842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:31,0 chr1 149761843 . G . PASS END=149761861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:24,0 chr1 149761862 . A . PASS END=149761862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr1 149761863 . G . PASS END=149761866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 149761867 . A . PASS END=149761879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,59,255:19,0 chr1 149761880 . A . PASS END=149761880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:16,0 chr1 149761881 . G . PASS END=149761894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:17,0 chr1 149762793 . G . PASS END=149762794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 149762795 . C . PASS END=149762795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 149762796 . T . PASS END=149762796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 149762797 . C . PASS END=149762806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 149762807 . A . PASS END=149762807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 149762808 . C . PASS END=149762810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 149762811 . C . PASS END=149762811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 149762812 . T . PASS END=149762812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 149762813 . G . PASS END=149762813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 149762814 . T . PASS END=149762823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr1 149762824 . T . PASS END=149762824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 149762825 . G . PASS END=149762827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,451:0,39,255:13,0 chr1 149762828 . C . PASS END=149762847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,482:0,42,255:17,0 chr1 149762848 . A . PASS END=149762848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 149762849 . A . PASS END=149762850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 149762851 . A . PASS END=149762851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,523:0,37,255:15,0 chr1 149762852 . A . PASS END=149762859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 149762860 . A . PASS END=149762901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,701:0,60,255:26,0 chr1 149762902 . A . PASS END=149762904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 149762905 . A . PASS END=149762905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 149762906 . A . PASS END=149762906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 149762907 . A . PASS END=149762907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 149762908 . G . PASS END=149762908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 149762909 . A . PASS END=149762909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,943:0,65,255:26,0 chr1 149762910 . A . PASS END=149762918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 149762919 . A . PASS END=149762920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 149762921 . T . PASS END=149762953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:29,0 chr1 149762954 . A . PASS END=149762954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 149762955 . A . PASS END=149762955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 149762956 . G . PASS END=149762956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 149762957 . G . PASS END=149762960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 149762961 . T . PASS END=149762961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 149762962 . T . PASS END=149762970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 149762971 . T . PASS END=149762971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 149762972 . C . PASS END=149762987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 149762988 . T . PASS END=149763015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 149763016 . A . PASS END=149763016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 149763017 . A . PASS END=149763025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 149763026 . C . PASS END=149763027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 149763028 . G . PASS END=149763032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 149763033 . A . PASS END=149763034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 149763035 . G . PASS END=149763040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 149763041 . G . PASS END=149763041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:19,0 chr1 149763042 . T . PASS END=149763042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149763043 . G . PASS END=149763043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,592:0,30,255:18,0 chr1 149763044 . C . PASS END=149763047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 149763048 . G . PASS END=149763048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 149763049 . G . PASS END=149763049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 149763050 . A . PASS END=149763050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 149763051 . A . PASS END=149763060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149763061 . G . PASS END=149763073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 149764090 . C . PASS END=149764090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 149764091 . T . PASS END=149764091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 149764092 . A . PASS END=149764092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:23,0 chr1 149764093 . G . PASS END=149764093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 149764094 . A . PASS END=149764094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 149764095 . T . PASS END=149764098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:24,0 chr1 149764099 . T . PASS END=149764099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 149764100 . T . PASS END=149764106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 149764107 . A . PASS END=149764107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 149764108 . T . PASS END=149764111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 149764112 . T . PASS END=149764112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 149764113 . A . PASS END=149764114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr1 149764115 . A . PASS END=149764116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:24,0 chr1 149764117 . G . PASS END=149764118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 149764119 . T . PASS END=149764119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 149764120 . G . PASS END=149764120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:23,0 chr1 149764121 . G . PASS END=149764128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:25,0 chr1 149764129 . C . PASS END=149764129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:21,0 chr1 149764130 . G . PASS END=149764130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 149764131 . T . PASS END=149764131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:22,0 chr1 149764132 . C . PASS END=149764132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 149764133 . G . PASS END=149764133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 149764134 . C . PASS END=149764137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 149764138 . C . PASS END=149764138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 149764139 . C . PASS END=149764141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 149764142 . G . PASS END=149764142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 149764143 . C . PASS END=149764146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 149764147 . T . PASS END=149764147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 149764148 . C . PASS END=149764160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,902:0,75,255:25,0 chr1 149764161 . C . PASS END=149764161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 149764162 . C . PASS END=149764162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 149764163 . T . PASS END=149764168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:17,0 chr1 149764169 . C . PASS END=149764173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:18,0 chr1 149764174 . T . PASS END=149764174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:15,0 chr1 149764175 . G . PASS END=149764179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 149764180 . C . PASS END=149764204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 149764205 . C . PASS END=149764205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 149764206 . T C, 9.41 DRAGENSnpHardQUAL DP=11;MQ=54.54;MQRankSum=-2.262;ReadPosRankSum=-1.106;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,3,0:0.273,0.000:11:5,3,0:3,0,0:9:44,0,44,107,286,393:111,0,255:6,0:9.4080e+00,5.2872e-01,4.7029e+01,1.0783e+02,3.2142e+02,3.9695e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,2,1,2:3,5,1,2 chr1 149764207 . G . PASS END=149764209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:8,0 chr1 149764210 . T . PASS END=149764217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,19,255:6,0 chr1 149764218 . C . PASS END=149764235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 149764236 . G . PASS END=149764236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 149764237 . G . PASS END=149764243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 149764244 . A . PASS END=149764251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 149764252 . C . PASS END=149764256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 149764257 . G . PASS END=149764257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:6,0 chr1 149764258 . C . PASS END=149764271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr1 149764272 . C . PASS END=149764272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 149764273 . T . PASS END=149764276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 149764277 . C . PASS END=149764301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,274:0,24,255:9,0 chr1 149764302 . C . LowGQ END=149764302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 149764303 . C . PASS END=149764307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 149764308 . G . PASS END=149764308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 149764309 . A . PASS END=149764318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 149764319 . T . LowGQ END=149764322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,311:6,0,255:10,0 chr1 149764323 . T . PASS END=149764331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:13,0 chr1 149764332 . G . LowGQ END=149764332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 149764333 . C . PASS END=149764336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 149764337 . A . PASS END=149764337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 149764338 . G . PASS END=149764339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 149764340 . A . PASS END=149764340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 149764341 . G . PASS END=149764358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 149764359 . G . PASS END=149764393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 149764394 . A . PASS END=149764409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 149764410 . C . PASS END=149764431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:16,0 chr1 149764432 . A . PASS END=149764432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 149764433 . G . PASS END=149764433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 149764434 . T . PASS END=149764434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 149764435 . C . PASS END=149764513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,598:0,40,255:19,0 chr1 149764514 . G . PASS END=149764542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,730:0,63,255:26,0 chr1 149764543 . C . PASS END=149764547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 149764548 . G . PASS END=149764551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 149764552 . C . PASS END=149764556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 149764557 . C . PASS END=149764557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 149764558 . T . PASS END=149764558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 149764559 . G . PASS END=149764561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 149764562 . T . PASS END=149764562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 149764563 . C . PASS END=149764582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1139:0,80,255:31,0 chr1 149764583 . C . PASS END=149764583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 149764584 . C . PASS END=149764585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 149764586 . G . PASS END=149764586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 149764587 . C . PASS END=149764588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1174:0,96,255:32,0 chr1 149764589 . A T, 25.90 PASS DP=32;MQ=55.52;MQRankSum=-1.162;ReadPosRankSum=2.852;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,10,0:0.323,0.000:31:11,4,0:10,6,0:26:61,0,46,352,725,1082:255,0,255:21,0:2.5904e+01,1.1217e-02,4.9361e+01,3.5221e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,6,4:11,10,8,2 chr1 149764590 . G . PASS END=149764602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1127:0,82,255:33,0 chr1 149764603 . G . PASS END=149764603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1146:0,66,255:31,0 chr1 149764604 . G . PASS END=149764605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 149764606 . G . PASS END=149764606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:29,0 chr1 149764607 . C . PASS END=149764621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1164:0,83,255:35,0 chr1 149764622 . G . PASS END=149764622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 149764623 . C . PASS END=149764626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1258:0,91,255:33,0 chr1 149764627 . C . PASS END=149764642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:32:0,81,1264:0,81,255:31,0 chr1 149764643 . T . PASS END=149764644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 149764645 . C . PASS END=149764645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 149764646 . C . PASS END=149764646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 149764647 . G . PASS END=149764649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:31,0 chr1 149764650 . A . PASS END=149764650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:28,0 chr1 149764651 . A . PASS END=149764666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1125:0,80,255:33,0 chr1 149764667 . C . PASS END=149764667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:30,0 chr1 149764668 . C . PASS END=149764668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1170:0,83,255:30,0 chr1 149764669 . G . PASS END=149764669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr1 149764670 . G . PASS END=149764673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1263:0,89,255:33,0 chr1 149764674 . C . PASS END=149764674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 149764675 . A . PASS END=149764681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1213:0,86,255:32,0 chr1 149764682 . C . PASS END=149764682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr1 149764683 . C . PASS END=149764702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:35:0,94,1305:0,94,255:36,0 chr1 149764703 . A . PASS END=149764703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:34,0 chr1 149764704 . G . PASS END=149764708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1363:0,81,255:35,1 chr1 149764709 . A . PASS END=149764710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:76:37:0,76,1144:0,76,255:32,1 chr1 149764711 . T . PASS END=149764711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:57:36:0,57,1245:0,57,255:29,1 chr1 149764712 . G . PASS END=149764712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:31,0 chr1 149764713 . G . PASS END=149764720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1355:0,95,255:33,0 chr1 149764721 . C . PASS END=149764721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:30,0 chr1 149764722 . A . PASS END=149764736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1089:0,80,255:32,0 chr1 149764737 . G . PASS END=149764737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 149764738 . G . PASS END=149764739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:29,0 chr1 149764740 . G . PASS END=149764740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1157:0,82,255:29,0 chr1 149764741 . C . PASS END=149764741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:28,0 chr1 149764742 . T . PASS END=149764742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:27,0 chr1 149764743 . G . PASS END=149764743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:28,0 chr1 149764744 . G . PASS END=149764744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 149764745 . G . PASS END=149764745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1108:0,44,255:27,0 chr1 149764746 . C . PASS END=149764746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr1 149764747 . T . PASS END=149764747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 149764748 . C . PASS END=149764748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:26,0 chr1 149764749 . C . PASS END=149764749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1039:0,16,255:26,0 chr1 149764750 . C . PASS END=149764750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1002:0,38,255:26,0 chr1 149764751 . A . PASS END=149764751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 149764752 . G . PASS END=149764752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 149764753 . C . PASS END=149764754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,945:0,32,255:26,0 chr1 149764755 . G . PASS END=149764755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 149764756 . G . PASS END=149764756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr1 149764757 . C . PASS END=149764757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 149764758 . G . PASS END=149764758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 149764759 . C . PASS END=149764759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 149764760 . C . PASS END=149764766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 149764767 . T . PASS END=149764767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1027:0,62,255:28,0 chr1 149764768 . C . PASS END=149764768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 149764769 . T . PASS END=149764769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr1 149764770 . T . PASS END=149764770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 149764771 . G . PASS END=149764771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr1 149764772 . G . PASS END=149764807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,877:0,62,255:26,0 chr1 149764808 . G . PASS END=149764808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 149764809 . G . PASS END=149764815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 149764816 . C . PASS END=149764826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,66,255:18,0 chr1 149764827 . T . PASS END=149764850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 149764851 . T . PASS END=149764851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 149764852 . C . PASS END=149764854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 149764855 . G . PASS END=149764855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 149764856 . C . PASS END=149764875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 149764876 . G . PASS END=149764876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr1 149764877 . T . PASS END=149764880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 149765153 . C . PASS END=149765184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:31:0,87,1258:0,89,255:36,0 chr1 149783498 . T . PASS END=149783878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:30:0,82,1141:0,82,255:40,1 chr1 149784826 . T . PASS END=149784847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,876:0,65,255:26,0 chr1 149784848 . C . PASS END=149784863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:30,0 chr1 149784864 . T . PASS END=149784864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 149784865 . G . PASS END=149784961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1208:0,83,255:37,0 chr1 149784962 . G . PASS END=149784962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 149784963 . C . PASS END=149785033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1230:0,91,255:38,0 chr1 149785034 . A . PASS END=149785034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 149785035 . A . PASS END=149785236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,101,1418:0,101,255:40,1 chr1 149804249 . A . LowDepth;LowGQ END=149804560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149812319 . T . LowDepth;LowGQ END=149812453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149812454 . C . LowDepth;LowGQ END=149812497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149812498 . C . LowDepth;LowGQ END=149812729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149813873 . T . LowDepth;LowGQ END=149814265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149822681 . A . LowDepth;LowGQ END=149823073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149824217 . A . LowDepth;LowGQ END=149824298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149824299 . A . LowDepth;LowGQ END=149824448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149824449 . A . LowDepth;LowGQ END=149824492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149824493 . C . LowDepth;LowGQ END=149824627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149824840 . C . LowDepth;LowGQ END=149825310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149832386 . C . LowDepth;LowGQ END=149832697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 149857810 . T . PASS END=149857816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,620:0,48,255:19,0 chr1 149857817 . G . PASS END=149857821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,825:0,66,255:23,0 chr1 149857822 . G . PASS END=149857830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 149857831 . G . PASS END=149857831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 149857832 . G . PASS END=149857832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 149857833 . T . PASS END=149857833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:29,0 chr1 149857834 . G . PASS END=149857845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1147:0,80,255:33,0 chr1 149857846 . G . PASS END=149857846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 149857847 . C . PASS END=149858173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:29:0,81,1215:0,87,255:40,1 chr1 149858174 . T . PASS END=149858174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,944:0,70,255:26,0 chr1 149858175 . T . PASS END=149858178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 149858179 . C . PASS END=149858186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:24,0 chr1 149858187 . G . PASS END=149858190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:24:0,51,765:0,72,255:19,0 chr1 149858525 . A . PASS END=149858525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 149858526 . T . PASS END=149858578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,671:0,66,255:25,0 chr1 149858579 . T . PASS END=149858579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 149858580 . C . PASS END=149858626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr1 149858627 . C . PASS END=149858631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 149858632 . C . PASS END=149858634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 149858635 . A . PASS END=149858635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,656:0,52,255:20,0 chr1 149858636 . G . PASS END=149858670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 149858671 . C . PASS END=149858678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 149858679 . T . PASS END=149858686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 149858687 . G . PASS END=149858693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 149858694 . A . PASS END=149858694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 149858695 . G . PASS END=149858729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1202:0,90,255:31,0 chr1 149858730 . A . PASS END=149858730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 149858731 . C . PASS END=149858741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:31,0 chr1 149858742 . A . PASS END=149858742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 149858743 . C . PASS END=149858769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 149858770 . T . PASS END=149858770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr1 149858771 . C . PASS END=149858774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 149858775 . T . PASS END=149858775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 149858776 . C . PASS END=149858780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 149858781 . T . PASS END=149858782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 149858783 . G . PASS END=149858783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 149858784 . C . PASS END=149858792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 149858793 . A . PASS END=149858793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 149858794 . C . PASS END=149858802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 149858803 . A . PASS END=149858804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 149858805 . T . PASS END=149858807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 149858808 . A . PASS END=149858808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 149858809 . C . PASS END=149858809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 149858810 . A . PASS END=149858814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 149858815 . G . PASS END=149858827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,68,255:24,0 chr1 149858828 . A . PASS END=149858828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 149858829 . C . PASS END=149858831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 149858832 . T . PASS END=149858833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,845:0,56,255:20,0 chr1 149858834 . G . PASS END=149858838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 149858839 . G . PASS END=149858839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:21,0 chr1 149858840 . G . PASS END=149858853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:23,0 chr1 149858854 . T . LowGQ END=149858854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,717:3,0,255:22,0 chr1 149858855 . A . PASS END=149858856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 149858857 . C . LowGQ END=149858857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,828:13,0,255:19,0 chr1 149858858 . A . PASS END=149858886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,825:0,65,255:23,0 chr1 149858887 . C . PASS END=149858887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 149858888 . G . PASS END=149858888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 149858889 . A . PASS END=149858889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149858890 . A . PASS END=149858890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 149858891 . A . PASS END=149858892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149858893 . C . PASS END=149858893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 149858894 . C . PASS END=149858895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 149858896 . C . PASS END=149858911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,675:0,44,255:17,0 chr1 149858912 . T . PASS END=149858912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 149858913 . A . PASS END=149858914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 149859074 . T . PASS END=149859074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149859075 . T . PASS END=149859075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 149859076 . A . PASS END=149859102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,685:0,60,255:26,0 chr1 149859103 . C . PASS END=149859121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,1041:0,80,255:33,0 chr1 149859122 . G . PASS END=149859122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr1 149859123 . A . PASS END=149859124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 149859125 . A . PASS END=149859125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:32,0 chr1 149859126 . G . PASS END=149859157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1240:0,92,255:36,0 chr1 149859158 . A . PASS END=149859158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:34,0 chr1 149859159 . A . PASS END=149859186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1310:0,92,255:36,0 chr1 149859187 . G . PASS END=149859187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:32,0 chr1 149859188 . C . PASS END=149859188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 149859189 . T . PASS END=149859189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:31,0 chr1 149859190 . C . PASS END=149859211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:34:0,95,1274:0,95,255:35,0 chr1 149859212 . T . PASS END=149859212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:33,0 chr1 149859213 . T . PASS END=149859229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1263:0,89,255:33,0 chr1 149859230 . G . PASS END=149859230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 149859231 . A . PASS END=149859277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1141:0,90,255:33,0 chr1 149859278 . A . PASS END=149859278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:27,0 chr1 149859279 . A . PASS END=149859280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 149859281 . T . PASS END=149859281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 149859282 . T . PASS END=149859282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 149859283 . C . PASS END=149859315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:25,0 chr1 149859316 . A . PASS END=149859316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 149859317 . C . PASS END=149859322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 149859323 . G . PASS END=149859323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:20,0 chr1 149859324 . G . PASS END=149859325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 149859326 . G . PASS END=149859329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 149859330 . G . PASS END=149859330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:20,0 chr1 149859331 . C . PASS END=149859378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:20,0 chr1 149859379 . G . PASS END=149859379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 149859380 . C . PASS END=149859382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 149859383 . C . PASS END=149859383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 149859384 . A . PASS END=149859389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 149859390 . A . PASS END=149859391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 149859392 . C . PASS END=149859405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 149859406 . G . PASS END=149859406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 149859407 . G . PASS END=149859420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 149859421 . T . PASS END=149859423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 149859424 . C . PASS END=149859430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 149859431 . G . PASS END=149859431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 149859432 . C . PASS END=149859466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 149871613 . A . PASS END=149871645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:16,0 chr1 149871646 . T . PASS END=149871646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 149871647 . C . PASS END=149871651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 149871652 . G . PASS END=149871652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 149871653 . C . PASS END=149871664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 149871665 . G . PASS END=149871665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 149871666 . T . PASS END=149871673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:17,0 chr1 149871674 . A . PASS END=149871674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 149871675 . G . PASS END=149871675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 149871676 . G . PASS END=149871679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr1 149871680 . G . PASS END=149871691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,540:0,32,255:13,0 chr1 149871692 . G . PASS END=149871692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 149871693 . G . PASS END=149871695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 149871696 . C . PASS END=149871696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 149871697 . A . PASS END=149871697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 149871698 . T . PASS END=149871752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 149871753 . G . PASS END=149871774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 149871775 . A . PASS END=149871775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 149871776 . G . PASS END=149871777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 149871778 . G . PASS END=149871788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr1 149871789 . G . PASS END=149871790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:10,0 chr1 149871791 . T . PASS END=149871800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 149871801 . C . PASS END=149871802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 149871803 . G . PASS END=149871803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 149871804 . T . PASS END=149871809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 149871810 . T . PASS END=149871810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 149871811 . C . PASS END=149871820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,402:0,20,255:9,0 chr1 149871821 . T . PASS END=149871844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,350:0,33,255:11,0 chr1 149871845 . A . PASS END=149871856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 149871857 . C . PASS END=149871906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 149871907 . G . PASS END=149871911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149871912 . G . PASS END=149871916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149871917 . A . PASS END=149871935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 149871936 . A . PASS END=149871939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 149871940 . A . PASS END=149871941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149871942 . C . PASS END=149871942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 149871943 . C . PASS END=149871943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149871944 . C . PASS END=149871998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:12,0 chr1 149871999 . G . PASS END=149872005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 149872006 . A . PASS END=149872025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr1 149872026 . A . PASS END=149872026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 149876566 . T . PASS END=149876627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:25,0 chr1 149876628 . G . PASS END=149876635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 149876636 . G . PASS END=149876644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1049:0,84,255:29,0 chr1 149876645 . A . PASS END=149876645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 149876646 . G . PASS END=149876664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1147:0,90,255:33,0 chr1 149876665 . G A, 46.94 PASS DP=35;MQ=250.00;MQRankSum=4.933;ReadPosRankSum=3.317;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,14,0:0.400,0.000:35:12,4,0:9,10,0:46:82,0,50,501,751,1252:255,0,255:19,0:4.6940e+01,1.0950e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,5,9:12,9,11,3 chr1 149876666 . A . PASS END=149876701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:35,0 chr1 149876702 . A . PASS END=149876702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 149876703 . C . PASS END=149876711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 149876712 . G . PASS END=149876729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1163:0,80,255:29,0 chr1 149876730 . G . PASS END=149876749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 149877428 . C . PASS END=149877591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:37:0,84,1260:0,90,255:40,0 chr1 149878202 . C . PASS END=149878206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,643:0,40,255:18,0 chr1 149878207 . A . PASS END=149878221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:23,0 chr1 149878222 . A . PASS END=149878222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr1 149878223 . T . PASS END=149878225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 149878226 . T . PASS END=149878226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 149878227 . G . PASS END=149878230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,939:0,78,255:26,0 chr1 149878231 . A . PASS END=149878231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 149878232 . T . PASS END=149878232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 149878233 . G . PASS END=149878240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 149878241 . C . PASS END=149878241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 149878242 . A . PASS END=149878248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 149878249 . A . PASS END=149878249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 149878250 . T . PASS END=149878255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 149878256 . C . PASS END=149878256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 149878257 . A . PASS END=149878288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1241:0,93,255:35,0 chr1 149878289 . C . PASS END=149878289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 149878290 . A . PASS END=149878442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:83:37:0,83,1485:0,83,255:40,0 chr1 149879252 . C . PASS END=149879385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,120,1800:0,137,255:40,0 chr1 149879594 . T . PASS END=149879758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,105,1493:0,108,255:40,0 chr1 149880744 . C . PASS END=149880832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:95:37:0,95,1311:0,95,255:40,0 chr1 149881013 . C . PASS END=149881013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149881014 . T . PASS END=149881014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 149881015 . G . PASS END=149881022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 149881023 . A . PASS END=149881023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 149881024 . G . PASS END=149881025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 149881026 . C . PASS END=149881026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 149881027 . T . PASS END=149881027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,405:0,3,255:13,0 chr1 149881028 . C . PASS END=149881028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 149881029 . A . PASS END=149881030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:13,0 chr1 149881031 . G . PASS END=149881034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:15,0 chr1 149881035 . C . PASS END=149881035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:14,0 chr1 149881036 . G . PASS END=149881038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 149881039 . C . PASS END=149881039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 149881040 . C . PASS END=149881040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 149881041 . C . PASS END=149881041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:17,0 chr1 149881042 . C . PASS END=149881047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr1 149881048 . G . PASS END=149881048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 149881049 . C . PASS END=149881049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr1 149881050 . T . PASS END=149881050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,590:0,5,255:18,0 chr1 149881051 . G . PASS END=149881051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 149881052 . G . PASS END=149881052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 149881053 . T . PASS END=149881053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,668:0,33,255:20,0 chr1 149881054 . A . PASS END=149881054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 149881055 . C . PASS END=149881056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 149881057 . A . PASS END=149881063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 149881064 . T . PASS END=149881064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 149881065 . G . PASS END=149881073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 149881074 . T . PASS END=149881074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 149881075 . G . PASS END=149881082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,762:0,66,255:23,0 chr1 149881083 . A . PASS END=149881083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 149881084 . T . PASS END=149881086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 149881087 . A . PASS END=149881087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 149881088 . T . PASS END=149881091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 149881092 . T . PASS END=149881092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 149881093 . C . PASS END=149881099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 149881100 . A . PASS END=149881100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 149881101 . T . PASS END=149881101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 149881102 . G . PASS END=149881102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr1 149881103 . A . PASS END=149881103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 149881104 . A . PASS END=149881108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 149881109 . C . PASS END=149881110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 149881111 . T . PASS END=149881111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 149881112 . A . PASS END=149881112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 149881113 . A . PASS END=149881114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 149881115 . G . PASS END=149881115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr1 149881116 . T . PASS END=149881123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,654:0,60,255:20,0 chr1 149881353 . T . PASS END=149881442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,104,1416:0,104,255:40,0 chr1 149882122 . C . PASS END=149882255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:34:0,92,1129:0,92,255:40,0 chr1 149882378 . C . PASS END=149882529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:37:0,87,1305:0,99,255:40,0 chr1 149883352 . C . PASS END=149883362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:19,0 chr1 149883363 . A . PASS END=149883404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr1 149883405 . A . PASS END=149883405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 149883406 . G . PASS END=149883433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1017:0,80,255:29,0 chr1 149883434 . C . PASS END=149883434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 149883435 . T . PASS END=149883438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 149883439 . A . PASS END=149883439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 149883440 . G . PASS END=149883453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 149883454 . C . PASS END=149883465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 149883466 . C . PASS END=149883473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 149883474 . G . PASS END=149883474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 149883475 . T . PASS END=149883475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 149883476 . C . PASS END=149883476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 149883477 . A . PASS END=149883477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 149883478 . G . PASS END=149883495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:23,0 chr1 149883496 . A . PASS END=149883496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr1 149883497 . A . PASS END=149883515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,829:0,66,255:22,0 chr1 149883516 . C . PASS END=149883525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,50,255:19,0 chr1 149883526 . A . PASS END=149883526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:14,0 chr1 149883527 . T . PASS END=149883527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:14,0 chr1 149883528 . G . PASS END=149883532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 149884771 . C . PASS END=149884777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 149884778 . G . PASS END=149884778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 149884779 . C . PASS END=149884781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 149884782 . T . PASS END=149884782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 149884783 . T . PASS END=149884793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,911:0,75,255:26,0 chr1 149884794 . G . PASS END=149884796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 149884797 . A . PASS END=149884797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 149884798 . G . PASS END=149884808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,853:0,81,255:28,0 chr1 149884809 . T . PASS END=149884810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,952:0,67,255:27,0 chr1 149884811 . C . PASS END=149884816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 149884817 . G . PASS END=149884819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:26,0 chr1 149884820 . G . PASS END=149884820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 149884821 . G . PASS END=149884821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1050:0,46,255:26,0 chr1 149884822 . G . PASS END=149884830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 149884831 . A . PASS END=149884831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 149884832 . G . PASS END=149884859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1086:0,80,255:31,0 chr1 149884860 . G . PASS END=149884860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:29,0 chr1 149884861 . C . PASS END=149884878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:29:0,83,971:0,83,255:30,0 chr1 149884879 . G . PASS END=149884879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:27,0 chr1 149884880 . C . PASS END=149884885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:29,0 chr1 149884886 . A . PASS END=149884895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,73,255:25,0 chr1 149884896 . C . PASS END=149884896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:23,0 chr1 149884897 . A . PASS END=149884904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:24,0 chr1 149884905 . C . PASS END=149884905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr1 149884906 . G . PASS END=149884913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr1 149884914 . C . PASS END=149884916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 149884917 . C . PASS END=149884929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:26,0 chr1 149884930 . T . PASS END=149884930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 149884931 . G . PASS END=149884938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 149884939 . A . PASS END=149884939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 149884940 . C . PASS END=149884943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 149884944 . T . PASS END=149884944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 149884945 . G . PASS END=149884946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 149884947 . G . PASS END=149884947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 149884948 . C . PASS END=149884949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 149884950 . A . PASS END=149884960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:19,0 chr1 149884961 . T . PASS END=149884961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149884962 . T . PASS END=149884962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:19,0 chr1 149884963 . C . PASS END=149884964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 149884965 . T . PASS END=149884965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 149884966 . T . PASS END=149884969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149884970 . T . PASS END=149884970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 149884971 . C . PASS END=149884972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149884973 . T . PASS END=149884973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 149884974 . T . PASS END=149884974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 149884975 . G . PASS END=149884975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 149884976 . T . PASS END=149884984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr1 149884985 . C . PASS END=149884985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 149884986 . C . PASS END=149884988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,715:0,49,255:18,0 chr1 149884989 . C . PASS END=149884989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149884990 . C . PASS END=149884990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 149884991 . C . PASS END=149884991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:16,0 chr1 149884992 . C . PASS END=149884999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,55,255:19,0 chr1 149885000 . A . PASS END=149885000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:2:22:0,2,568:0,2,255:16,0 chr1 149885001 . C . PASS END=149885004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,562:0,40,255:19,0 chr1 149885005 . C . PASS END=149885007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,615:0,21,255:16,0 chr1 149885008 . C . PASS END=149885010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:4:20:0,4,545:0,4,255:15,0 chr1 149885011 . C . PASS END=149885011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:15,0 chr1 149885012 . A . PASS END=149885012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:14,0 chr1 149885013 . C . PASS END=149885013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:15,0 chr1 149885014 . T . PASS END=149885014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:14,0 chr1 149885015 . C . LowGQ END=149885015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,496:1,0,255:13,0 chr1 149885016 . A . PASS END=149885017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,446:0,12,255:14,0 chr1 149885018 . G . PASS END=149885018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,497:0,34,255:14,0 chr1 149885019 . C . PASS END=149885020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,491:0,12,255:14,0 chr1 149885021 . C . PASS END=149885022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,409:0,9,255:12,0 chr1 149885023 . C . PASS END=149885023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:15,0 chr1 149885024 . C . PASS END=149885025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,643:0,40,255:16,0 chr1 149885026 . T . LowGQ END=149885027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,435:2,0,255:14,0 chr1 149885028 . A . PASS END=149885029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,529:0,21,255:17,0 chr1 149885030 . T . PASS END=149885030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 149885031 . C . PASS END=149885032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,593:0,21,255:17,0 chr1 149885033 . A . PASS END=149885034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 149885035 . C . PASS END=149885036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,607:0,21,255:19,0 chr1 149885037 . A . LowGQ END=149885038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,438:0,0,255:18,0 chr1 149885039 . G . PASS END=149885041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr1 149885042 . C . LowGQ END=149885042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,515:18,0,255:18,0 chr1 149885043 . G . PASS END=149885044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:21:20:0,21,627:0,21,255:19,0 chr1 149885045 . C . PASS END=149885045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 149885046 . C . PASS END=149885046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 149885047 . C . PASS END=149885048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,568:0,27,255:19,0 chr1 149885049 . T . PASS END=149885049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,549:0,10,255:17,0 chr1 149885050 . C . PASS END=149885050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 149885051 . T . PASS END=149885051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,658:0,43,255:19,0 chr1 149885052 . G . PASS END=149885052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 149885053 . C . PASS END=149885054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:18,0 chr1 149885055 . A . PASS END=149885055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,606:0,13,255:18,0 chr1 149885056 . T . PASS END=149885058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:18,0 chr1 149885059 . G . PASS END=149885059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,643:0,13,255:17,0 chr1 149885060 . C . PASS END=149885060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 149885061 . T . PASS END=149885061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,582:0,13,255:17,0 chr1 149885062 . C . PASS END=149885063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 149885064 . C . PASS END=149885066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,613:0,43,255:19,0 chr1 149885067 . T . PASS END=149885067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 149885068 . T . PASS END=149885068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,612:0,13,255:18,0 chr1 149885069 . G . PASS END=149885069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:17,0 chr1 149885070 . C . PASS END=149885070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 149885071 . C . PASS END=149885071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 149885072 . C . PASS END=149885073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 149885074 . C . PASS END=149885074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 149885075 . A . PASS END=149885075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 149885076 . G . PASS END=149885076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 149885077 . A . PASS END=149885077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,709:0,30,255:21,0 chr1 149885078 . C . PASS END=149885078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 149885079 . T . PASS END=149885079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:20,0 chr1 149885080 . C . PASS END=149885080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 149885081 . T . PASS END=149885081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:20,0 chr1 149885082 . G . PASS END=149885082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr1 149885083 . C . PASS END=149885089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 149885090 . A . PASS END=149885090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 149885091 . A . PASS END=149885097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 149885098 . G . PASS END=149885098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 149885099 . A . PASS END=149885099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,756:0,33,255:21,0 chr1 149885100 . T . PASS END=149885100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:21,0 chr1 149885101 . A . LowGQ END=149885101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,526:23,0,255:19,0 chr1 149885102 . T . PASS END=149885102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:20,0 chr1 149885103 . T . PASS END=149885103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 149885104 . C . PASS END=149885104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 149885105 . C . PASS END=149885105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:22,0 chr1 149885106 . C . PASS END=149885107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr1 149885108 . T . PASS END=149885108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,809:0,44,255:23,0 chr1 149885109 . T . PASS END=149885115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,866:0,65,255:26,0 chr1 149885116 . T . PASS END=149885116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,873:0,53,255:25,0 chr1 149885117 . C . PASS END=149885123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr1 149885124 . T . PASS END=149885124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 149885125 . C . PASS END=149885126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 149885127 . T . PASS END=149885130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 149885131 . C . PASS END=149885131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 149885132 . A . PASS END=149885135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:26,0 chr1 149885136 . C . PASS END=149885137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 149885138 . C . PASS END=149885138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 149885139 . T . PASS END=149885160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1066:0,80,255:32,0 chr1 149885161 . C . PASS END=149885162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:30,0 chr1 149885163 . C . PASS END=149885165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1121:0,85,255:33,0 chr1 149885166 . T . PASS END=149885166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:32,0 chr1 149885167 . C . PASS END=149885173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 149885174 . A . PASS END=149885174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1140:0,72,255:32,0 chr1 149885175 . T . PASS END=149885179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 149885180 . G . PASS END=149885180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1097:0,72,255:32,0 chr1 149885181 . G . PASS END=149885186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1302:0,92,255:34,0 chr1 149885187 . T . PASS END=149885187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1119:0,75,255:32,0 chr1 149885188 . C . PASS END=149885209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1103:0,82,255:33,0 chr1 149885210 . G . PASS END=149885211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:33:0,78,1170:0,86,255:26,0 chr1 149885212 . G . PASS END=149885217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:29,0 chr1 149885218 . G . PASS END=149885218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:29,0 chr1 149885219 . G . PASS END=149885225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 149885226 . T . PASS END=149885228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 149885229 . T . PASS END=149885230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 149885231 . A . PASS END=149885232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 149885233 . C . PASS END=149885253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 149885254 . A . PASS END=149885254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:25,0 chr1 149885255 . G . PASS END=149885264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 149885265 . C . PASS END=149885265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 149885266 . G . PASS END=149885271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 149885272 . A . PASS END=149885272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:27,0 chr1 149885273 . T . PASS END=149885284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 149885285 . T . PASS END=149885290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,76,255:23,0 chr1 149885291 . C . PASS END=149885292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:22,0 chr1 149885293 . G . PASS END=149885332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,902:0,69,255:25,0 chr1 149885333 . C . PASS END=149885333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 149885334 . T . PASS END=149885334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 149885335 . T . PASS END=149885337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 149885338 . C . PASS END=149885338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 149885339 . A . PASS END=149885359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 149885360 . G . PASS END=149885360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr1 149885361 . A . PASS END=149885372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 149885373 . T . PASS END=149885392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 149895434 . T . PASS END=149895434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 149895435 . T . PASS END=149895435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 149895436 . A . PASS END=149895440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:18,0 chr1 149895441 . G . PASS END=149895445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 149895446 . A . PASS END=149895446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 149895447 . G . PASS END=149895475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:24,0 chr1 149895476 . T . PASS END=149895476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 149895477 . G . PASS END=149895505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,953:0,62,255:26,0 chr1 149895506 . G . PASS END=149895506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr1 149895507 . A . PASS END=149895512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,882:0,62,255:23,0 chr1 149895513 . C . PASS END=149895513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 149895514 . C . PASS END=149895514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 149895515 . C . PASS END=149895515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,759:0,17,255:22,0 chr1 149895516 . C . PASS END=149895516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 149895517 . G . PASS END=149895517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 149895518 . C . PASS END=149895519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 149895520 . G . PASS END=149895527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 149895528 . T . PASS END=149895528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 149895529 . A . PASS END=149895530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 149895531 . G . PASS END=149895535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 149895536 . G . PASS END=149895536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr1 149895537 . G . PASS END=149895572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1125:0,89,255:33,0 chr1 149895573 . A . PASS END=149895573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 149895574 . G . PASS END=149895579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 149895580 . G . PASS END=149895621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr1 149895624 . G . PASS END=149895624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 149895733 . C . PASS END=149895741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr1 149895742 . A . PASS END=149895742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 149895743 . T . PASS END=149895750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 149895751 . G . PASS END=149895751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 149895752 . A . PASS END=149895755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:12,0 chr1 149895756 . C . PASS END=149895769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 149895770 . G . PASS END=149895770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 149895771 . C . PASS END=149895775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,584:0,48,255:17,0 chr1 149895776 . T . PASS END=149895776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 149895777 . G . PASS END=149895805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,637:0,44,255:19,0 chr1 149895806 . T . PASS END=149895806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:16,0 chr1 149895807 . G . PASS END=149895823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 149895824 . C . PASS END=149895825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 149895826 . G . PASS END=149895832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 149895833 . A . PASS END=149895834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 149895835 . A . PASS END=149895836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 149895837 . C . PASS END=149895837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 149895838 . C . PASS END=149895838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 149895839 . T . PASS END=149895839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:17,0 chr1 149895840 . G . PASS END=149895862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 149895863 . T . PASS END=149895863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:13,0 chr1 149895864 . A . PASS END=149895865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 149895866 . G . PASS END=149895866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:12,0 chr1 149895867 . C . PASS END=149895869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149895870 . T . PASS END=149895870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:12,0 chr1 149895871 . G . PASS END=149895877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 149895878 . A . PASS END=149895879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,451:0,25,255:13,0 chr1 149895880 . G . PASS END=149895889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 149895890 . C . PASS END=149895894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 149895895 . T . PASS END=149895895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:6,0 chr1 149895896 . C . PASS END=149895897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 149895898 . G . PASS END=149895898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr1 149895899 . A . PASS END=149895901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:7,0 chr1 149895902 . C . PASS END=149895906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 149897727 . C . PASS END=149897762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:21:0,61,747:0,61,255:25,0 chr1 149897763 . G . PASS END=149897836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1072:0,87,255:35,0 chr1 149897837 . A . PASS END=149897837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:25,0 chr1 149897838 . G . PASS END=149897845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:28,0 chr1 149897846 . A . PASS END=149897846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 149897847 . G . PASS END=149897850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 149897851 . G . PASS END=149897851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 149897852 . T . PASS END=149897857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 149897858 . C . PASS END=149897861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,954:0,70,255:26,0 chr1 149897862 . G . PASS END=149897863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 149897864 . T . PASS END=149897871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,955:0,67,255:25,0 chr1 149897872 . T . PASS END=149897872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 149897873 . C . PASS END=149897873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 149897874 . C . PASS END=149897874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 149897875 . C . PASS END=149897875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 149897876 . A . PASS END=149897881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 149897882 . G . PASS END=149897882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 149897883 . A . PASS END=149897883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:24,0 chr1 149897884 . G . PASS END=149897886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 149897887 . C . PASS END=149897888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 149897889 . C . PASS END=149897892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1078:0,63,255:26,0 chr1 149897893 . G . PASS END=149897893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 149897894 . A . PASS END=149897894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:25,0 chr1 149897895 . G . PASS END=149897912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr1 149897913 . A . PASS END=149897913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 149897914 . A . PASS END=149897914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,790:0,25,255:18,0 chr1 149897915 . G . PASS END=149897920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 149897921 . A . PASS END=149897921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,648:0,27,255:19,0 chr1 149897922 . G . PASS END=149897922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 149897923 . G . PASS END=149897923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr1 149897924 . A . PASS END=149897934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 149898268 . C . PASS END=149898811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:82:35:0,82,1319:0,82,255:40,0 chr1 149899058 . C . PASS END=149899186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:36:0,81,1215:0,97,255:40,0 chr1 149899618 . C . PASS END=149899618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 149899619 . C . PASS END=149899622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 149899623 . T . PASS END=149899623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:26,0 chr1 149899624 . T . PASS END=149899624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 149899625 . C . PASS END=149899628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 149899629 . T . PASS END=149899629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 149899630 . C . PASS END=149899641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 149899642 . C . PASS END=149899642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:25,0 chr1 149899643 . G . PASS END=149899644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 149899645 . C . PASS END=149899651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr1 149899913 . C . PASS END=149899913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 149900759 . T . PASS END=149900793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,188,255:40,0 chr1 149901021 . C . PASS END=149901036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:56:0,93,1789:0,93,255:40,0 chr1 149901037 . T . PASS END=149901209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:83:33:0,83,1216:0,83,255:40,0 chr1 149901515 . C . PASS END=149901545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr1 149901546 . C . LowGQ END=149901546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 149901547 . G . PASS END=149901554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 149901555 . A . PASS END=149901568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 149901569 . T . PASS END=149901571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149901572 . C . PASS END=149901572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 149901573 . A . PASS END=149901582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 149901583 . G . PASS END=149901592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 149901593 . C . PASS END=149901595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 149901596 . T . PASS END=149901608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 149901609 . C . PASS END=149901610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 149901611 . A . PASS END=149901611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149901612 . G . PASS END=149901612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149901613 . C . PASS END=149901631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 149901632 . A . PASS END=149901634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 149901635 . C . PASS END=149901636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 149901637 . A . PASS END=149901637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 149901638 . T . PASS END=149901650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 149901651 . A . PASS END=149901651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 149901652 . G . PASS END=149901671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:12,0 chr1 149901672 . G . PASS END=149901677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 149901678 . G . PASS END=149901678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 149901679 . G . PASS END=149901688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 149901689 . A . PASS END=149901689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 149901690 . G . PASS END=149901694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 149901695 . G . PASS END=149901705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 149901706 . G . PASS END=149901709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 149901710 . A . PASS END=149901710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 149901711 . G . PASS END=149901715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 149901716 . G . PASS END=149901716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 149901717 . T . PASS END=149901735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,706:0,51,255:19,0 chr1 149901736 . G . PASS END=149901744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:22,0 chr1 149901745 . G . PASS END=149901745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 149901746 . G . PASS END=149901746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149901747 . G . PASS END=149901747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 149901748 . T . PASS END=149901757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr1 149901758 . T . PASS END=149901758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 149901759 . C . PASS END=149901768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 149901769 . G . PASS END=149901793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,44,255:18,0 chr1 149901794 . A . PASS END=149901808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,443:0,39,255:13,0 chr1 149902257 . C . PASS END=149902271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1000:0,78,255:26,0 chr1 149902272 . C . PASS END=149902284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:31,0 chr1 149902285 . C . PASS END=149902285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:29,0 chr1 149902286 . A . PASS END=149902304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1286:0,92,255:36,0 chr1 149902305 . A . PASS END=149902314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1335:0,95,255:37,0 chr1 149902315 . A . PASS END=149902315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1221:0,72,255:34,0 chr1 149902316 . A . PASS END=149902341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,105,1575:0,111,255:40,0 chr1 149902342 . C T, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.699;ReadPosRankSum=1.839;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,25,0:0.556,0.000:45:10,14,0:10,11,0:47:85,0,46,185,185,185:255,0,255:18,0:5.0000e+01,9.4744e-05,4.9278e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,14,8,17:10,10,15,10 chr1 149902343 . G . PASS END=149902379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1543:0,113,255:40,0 chr1 149902380 . A . PASS END=149902412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1260:0,101,255:39,0 chr1 149902413 . G . PASS END=149902434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:25:0,60,900:0,64,255:25,0 chr1 149902435 . T . PASS END=149902439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 149902684 . C . PASS END=149902684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 149902685 . T . PASS END=149902685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,787:0,25,255:19,0 chr1 149902686 . G . PASS END=149902714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 149902715 . G . PASS END=149902722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 149902723 . C . PASS END=149902727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 149902728 . A . PASS END=149902856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1177:0,83,255:40,0 chr1 149902857 . C . PASS END=149902857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr1 149903152 . C . PASS END=149903173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:23,0 chr1 149903174 . C . PASS END=149903174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 149903175 . C . PASS END=149903213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,902:0,72,255:26,0 chr1 149903214 . C . PASS END=149903276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1103:0,82,255:32,0 chr1 149903277 . C . PASS END=149903299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 149903300 . A . PASS END=149903300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 149903301 . G . PASS END=149903309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 149903310 . C . PASS END=149903318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 149903836 . C . PASS END=149903906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:54:0,120,1800:0,127,255:40,0 chr1 149904156 . C . PASS END=149904222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:37:0,93,1395:0,107,255:40,0 chr1 149905299 . C . PASS END=149905300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 149905301 . G . PASS END=149905309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 149905310 . A . PASS END=149905310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 149905311 . G . PASS END=149905326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,892:0,62,255:26,0 chr1 149905327 . G . PASS END=149905355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,912:0,81,255:28,0 chr1 149905356 . G . PASS END=149905358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 149905359 . G . PASS END=149905359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 149905360 . C . PASS END=149905423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,784:0,63,255:26,0 chr1 149905503 . C . PASS END=149905586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1127:0,80,255:38,0 chr1 149905587 . A . PASS END=149905587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 149905588 . A . PASS END=149905591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 149905748 . C . PASS END=149905835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:32:0,86,1374:0,86,255:40,0 chr1 149906084 . C . PASS END=149906103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:18,0 chr1 149906104 . C . PASS END=149906117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,595:0,60,255:21,0 chr1 149906118 . T . PASS END=149906118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 149906119 . G . PASS END=149906120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 149906121 . C . PASS END=149906127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 149906128 . G . PASS END=149906130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 149906131 . T . PASS END=149906131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,613:0,8,255:18,0 chr1 149906132 . C . PASS END=149906152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 149906153 . T . PASS END=149906159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 149906160 . C . PASS END=149906165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 149906166 . C . PASS END=149906166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 149906167 . T . PASS END=149906169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 149906170 . C . PASS END=149906170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 149906171 . G . PASS END=149906184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr1 149906185 . A . PASS END=149906185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 149906186 . G . PASS END=149906210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,717:0,66,255:23,0 chr1 149906211 . A . PASS END=149906211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 149906212 . A . PASS END=149906216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149906217 . G . PASS END=149906217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 149906218 . G . PASS END=149906219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 149906341 . C . PASS END=149906419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,1066:0,82,255:40,0 chr1 149906879 . C . PASS END=149907013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:32:0,90,1319:0,95,255:40,0 chr1 149907014 . G . PASS END=149907014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:31,0 chr1 149907015 . C . PASS END=149907021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:32,0 chr1 149907192 . C . PASS END=149907252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:56:0,119,1800:0,119,255:40,0 chr1 149907477 . C . PASS END=149907598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:36:0,80,1264:0,80,255:40,0 chr1 149908047 . C . PASS END=149908122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:33:0,90,1235:0,90,255:40,0 chr1 149908475 . C . PASS END=149908478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 149908479 . A . PASS END=149908479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,297:0,19,255:11,0 chr1 149908480 . T . PASS END=149908481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 149908482 . T . PASS END=149908482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:11,0 chr1 149908483 . C . PASS END=149908483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 149908484 . T . PASS END=149908486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 149908487 . C . PASS END=149908487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 149908488 . T . PASS END=149908490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,385:0,36,255:13,0 chr1 149908491 . T . PASS END=149908493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 149908494 . T . PASS END=149908494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,441:0,15,255:14,0 chr1 149908495 . T . PASS END=149908505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,515:0,48,255:16,0 chr1 149908506 . A . PASS END=149908506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:14,0 chr1 149908507 . T . PASS END=149908507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 149908508 . G . PASS END=149908508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 149908509 . T . PASS END=149908534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,604:0,45,255:16,0 chr1 149908535 . C . PASS END=149908535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 149908536 . C . PASS END=149908546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 149908547 . G . PASS END=149908547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 149908548 . G . PASS END=149908548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149908549 . C . PASS END=149908549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:13,0 chr1 149908550 . T . PASS END=149908554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 149915756 . T . PASS END=149915773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:19,0 chr1 149915774 . G . PASS END=149915779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 149915780 . C . PASS END=149915780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 149915781 . C . PASS END=149915798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:24,0 chr1 149915799 . C . PASS END=149915799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 149915800 . T . PASS END=149915809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 149915810 . T . PASS END=149915812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 149915813 . T . PASS END=149915813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 149915814 . T . PASS END=149915817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 149915818 . T . PASS END=149915843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,826:0,64,255:26,0 chr1 149915844 . G . PASS END=149915849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 149915850 . G . PASS END=149915857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 149915858 . A . PASS END=149915858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:24,0 chr1 149915859 . T . PASS END=149915868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 149915869 . A . PASS END=149915869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,849:0,47,255:22,0 chr1 149915870 . G . PASS END=149915902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,937:0,64,255:24,0 chr1 149915903 . A . PASS END=149915903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 149915904 . A . PASS END=149915904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,1 chr1 149915905 . G . PASS END=149915906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:46:27:0,46,929:0,46,255:24,1 chr1 149915907 . C . PASS END=149915920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,1 chr1 149915921 . A . PASS END=149915921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 149915922 . G . PASS END=149915935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 149915936 . C . PASS END=149915936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 149915937 . T . PASS END=149915940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 149915941 . G . PASS END=149915941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 149915942 . G . PASS END=149915946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 149915947 . C . PASS END=149915960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,698:0,52,255:18,0 chr1 149915961 . C . PASS END=149915961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 149915962 . T . PASS END=149915993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,576:0,45,255:18,0 chr1 149915994 . A . PASS END=149915995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 149915996 . C . PASS END=149916053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:18,0 chr1 149916054 . C . PASS END=149916055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 149916056 . G . PASS END=149916058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 149916059 . C . PASS END=149916064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 149916065 . G . PASS END=149916109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:17,0 chr1 149916110 . T . PASS END=149916111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 149916112 . G . PASS END=149916114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 149916115 . G . PASS END=149916115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 149916116 . T . PASS END=149916158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 149916159 . T . PASS END=149916178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:23,0 chr1 149916179 . C . PASS END=149916179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 149916180 . C . PASS END=149916183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:24,0 chr1 149916184 . A . PASS END=149916185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,748:0,41,255:23,0 chr1 149916186 . G . PASS END=149916208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,726:0,61,255:25,0 chr1 149916209 . A . PASS END=149916231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 149916232 . T . PASS END=149916233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 149916234 . G . PASS END=149916280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1302:0,89,255:37,0 chr1 149916281 . T . PASS END=149916281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr1 149916282 . G . PASS END=149916587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:34:0,84,1260:0,95,255:40,0 chr1 149916588 . G . PASS END=149916588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 149916589 . C . PASS END=149916600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:28,0 chr1 149916601 . T . PASS END=149916601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 149916602 . G . PASS END=149916616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1009:0,84,255:29,0 chr1 149916617 . C . PASS END=149916622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 149916623 . T . PASS END=149916624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 149916625 . A . PASS END=149916626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 149916627 . T . PASS END=149916633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 149916634 . T . PASS END=149916634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 149916635 . C . PASS END=149916639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 149916640 . T . PASS END=149916640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 149916641 . C . PASS END=149916654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1023:0,84,255:30,0 chr1 149916655 . T . PASS END=149916655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr1 149916656 . G . PASS END=149916658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 149916659 . G . PASS END=149916661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 149916662 . G . PASS END=149916662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 149916663 . C . PASS END=149916663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 149916664 . T . PASS END=149916664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 149916665 . T . PASS END=149916668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 149916669 . C . PASS END=149916676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 149916677 . T . PASS END=149916678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 149916679 . T . PASS END=149916679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:25,0 chr1 149916680 . C . PASS END=149916688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr1 149916689 . T . PASS END=149916689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:22,0 chr1 149916690 . C . PASS END=149916709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,773:0,61,255:25,0 chr1 149916710 . G . PASS END=149916712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 149916713 . C . PASS END=149916713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 149916714 . A . PASS END=149916715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 149916716 . C . PASS END=149916716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 149916717 . A . PASS END=149916725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 149916726 . A . PASS END=149916726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr1 149916727 . T . PASS END=149916743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1091:0,80,255:34,0 chr1 149916744 . C . PASS END=149916744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 149916745 . T . PASS END=149916788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1238:0,89,255:36,0 chr1 149916789 . T . PASS END=149916789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:30,0 chr1 149916790 . C . PASS END=149916790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1155:0,52,255:29,0 chr1 149916791 . T . PASS END=149916791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr1 149916792 . G . PASS END=149916793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 149916794 . T . PASS END=149916794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:30,0 chr1 149916795 . C . PASS END=149916803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1209:0,86,255:35,0 chr1 149916804 . T . PASS END=149916804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1235:0,64,255:32,0 chr1 149916805 . C . PASS END=149916806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:33,0 chr1 149916807 . T . PASS END=149916808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:32,0 chr1 149916809 . C . PASS END=149916809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 149916810 . T . PASS END=149916810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr1 149916811 . C . PASS END=149916881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1148:0,85,255:34,0 chr1 149916882 . T . PASS END=149916897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:24,0 chr1 149916898 . A . PASS END=149916898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 149916899 . C . PASS END=149916920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 149916921 . T . PASS END=149916921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 149916922 . C . PASS END=149916930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 149916931 . A . PASS END=149916944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 149916945 . T . PASS END=149916956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,38,255:13,0 chr1 149916957 . A . PASS END=149916964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:10:0,23,360:0,23,255:9,0 chr1 149919125 . C . PASS END=149919236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:59:0,120,1800:0,150,255:40,2 chr1 149920871 . C . PASS END=149920877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 149920878 . A . PASS END=149920901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:29,0 chr1 149920902 . T . PASS END=149920902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 149920903 . G . PASS END=149920936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1072:0,83,255:33,0 chr1 149920937 . A . PASS END=149920951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:25,0 chr1 149920952 . A . PASS END=149920965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:17:0,42,630:0,51,255:17,0 chr1 149920966 . A . PASS END=149920985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 149921532 . C . PASS END=149921533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 149921534 . T . PASS END=149921534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 149921535 . G . PASS END=149921542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 149921543 . G . PASS END=149921681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1109:0,80,255:40,0 chr1 149921997 . C . PASS END=149922115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1215:0,100,255:40,0 chr1 149922116 . C . PASS END=149922116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:26,0 chr1 149922117 . T . PASS END=149922117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,783:0,37,255:24,0 chr1 149922118 . C . PASS END=149922119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 149922120 . C . PASS END=149922124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr1 149931603 . C . PASS END=149931715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:47:0,105,1575:0,125,255:40,0 chr1 149936147 . C . PASS END=149936269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1184:0,82,255:40,0 chr1 149936270 . C . PASS END=149936274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:24,0 chr1 149937702 . C . PASS END=149937734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,852:0,61,255:26,0 chr1 149937735 . C . PASS END=149937743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1135:0,90,255:31,0 chr1 149937744 . T . PASS END=149937744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 149937745 . T . PASS END=149937771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1133:0,82,255:32,0 chr1 149937772 . G . PASS END=149937791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:22:0,60,837:0,66,255:23,0 chr1 149937792 . A . PASS END=149937803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:19:0,57,706:0,57,255:19,0 chr1 149939219 . C . PASS END=149939230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:24,0 chr1 149939231 . A . PASS END=149939231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 149939232 . G . PASS END=149939236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 149939237 . C . PASS END=149939237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 149939238 . C . PASS END=149939238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 149939239 . A . PASS END=149939400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1080:0,84,255:37,0 chr1 149939401 . A . PASS END=149939401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:31,0 chr1 149939402 . C . PASS END=149939425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1164:0,86,255:32,0 chr1 149939426 . T . PASS END=149939440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:24:0,66,990:0,72,255:24,0 chr1 149939441 . G . PASS END=149939441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 149939442 . T . PASS END=149939446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 149942991 . C . PASS END=149942993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 149942994 . G . PASS END=149942994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 149942995 . A . PASS END=149942996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,403:0,36,255:12,0 chr1 149942997 . C . PASS END=149942997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 149942998 . G . PASS END=149943009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 149943010 . C . PASS END=149943032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:19,0 chr1 149943033 . G . PASS END=149943033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 149943034 . G . PASS END=149943035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 149943036 . G . PASS END=149943055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 149943056 . A . PASS END=149943057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 149943058 . C . PASS END=149943059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 149943060 . C . PASS END=149943062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 149943063 . T . PASS END=149943094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 149943095 . C . PASS END=149943105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:29,0 chr1 149943106 . G . PASS END=149943106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 149943107 . G . PASS END=149943126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 149943127 . T . PASS END=149943127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:25,0 chr1 149943128 . T . PASS END=149943129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 149943130 . A . PASS END=149943132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 149943133 . T . PASS END=149943150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1011:0,87,255:29,0 chr1 149943151 . G . PASS END=149943175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 149943176 . T . PASS END=149943179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 149949361 . C . PASS END=149949365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1054:0,90,255:30,0 chr1 149949366 . A . PASS END=149949366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr1 149949367 . G . PASS END=149949370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:30,0 chr1 149949371 . A . PASS END=149949371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr1 149949372 . T . PASS END=149949438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1020:0,83,255:35,0 chr1 149949439 . G . PASS END=149949441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 149949442 . T . PASS END=149949445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150039915 . A . PASS END=150040007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,105,1361:0,105,255:40,0 chr1 150040672 . C . PASS END=150040685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,720:0,44,255:19,0 chr1 150040686 . G . PASS END=150040692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:26,0 chr1 150040693 . A . PASS END=150040878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:27:0,81,986:0,81,255:40,0 chr1 150044233 . G . PASS END=150044293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,207,255:40,0 chr1 150048311 . A . PASS END=150048338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1249:0,99,255:40,0 chr1 150048339 . C . PASS END=150048390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,122,255:40,0 chr1 150048994 . G . PASS END=150049062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,120,1800:0,157,255:40,0 chr1 150049172 . G . PASS END=150049309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,92,255:40,0 chr1 150049747 . C . PASS END=150049855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1260:0,89,255:40,0 chr1 150049856 . A . PASS END=150049856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:28,0 chr1 150049857 . G . PASS END=150049857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 150053424 . T . PASS END=150053429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,759:0,60,255:26,0 chr1 150053430 . T . PASS END=150053433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1234:0,102,255:34,0 chr1 150053434 . A . PASS END=150053434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:33,0 chr1 150053435 . G . PASS END=150053558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:41:0,90,1350:0,98,255:40,0 chr1 150053966 . A . PASS END=150054079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:61:0,120,1800:0,183,255:40,0 chr1 150054800 . G . PASS END=150054802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150054803 . T . PASS END=150054803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,726:0,25,255:25,0 chr1 150054804 . T . PASS END=150054806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,955:0,65,255:26,0 chr1 150054807 . T . PASS END=150054812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 150054813 . A . PASS END=150054813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 150054814 . T . PASS END=150054817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1068:0,93,255:31,0 chr1 150054818 . C . PASS END=150054818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 150054819 . C . PASS END=150054935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:31:0,88,1148:0,88,255:40,0 chr1 150054936 . C . PASS END=150054936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:33,0 chr1 150054937 . C . PASS END=150054974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:27:0,81,1016:0,81,255:36,0 chr1 150054975 . C . PASS END=150054982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 150064031 . A . PASS END=150064148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,105,1582:0,105,255:40,0 chr1 150064149 . T . PASS END=150064149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1288:0,67,255:33,0 chr1 150064150 . G . PASS END=150064189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1125:0,80,255:35,0 chr1 150064396 . C . PASS END=150064503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,137,255:40,0 chr1 150064508 . A . PASS END=150064508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr1 150065623 . G . PASS END=150065744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:35:0,87,1236:0,92,255:40,0 chr1 150070952 . A . PASS END=150070970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:72:0,120,1800:0,184,255:40,0 chr1 150082611 . A . PASS END=150082618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1074:0,82,255:34,0 chr1 150082619 . A . PASS END=150082619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1165:0,58,255:33,0 chr1 150082620 . T . PASS END=150082650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,960:0,89,255:40,0 chr1 150082651 . T . PASS END=150082651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1337:0,76,255:39,0 chr1 150082652 . A . PASS END=150082716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:34:0,81,1215:0,93,255:40,0 chr1 150082717 . G . PASS END=150082725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,77,255:23,0 chr1 150082726 . G . PASS END=150082742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,684:0,57,255:19,0 chr1 150116883 . T . PASS END=150116883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 150116887 . T . PASS END=150116890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 150116891 . C . PASS END=150116899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 150116900 . G . PASS END=150117084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1008:0,81,255:40,0 chr1 150117085 . C . PASS END=150117085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:30,0 chr1 150117086 . T . PASS END=150117087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:31,0 chr1 150117088 . A . PASS END=150117088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:27,0 chr1 150117089 . T . PASS END=150117093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:27,0 chr1 150117094 . A . PASS END=150117099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:29:0,69,1035:0,87,255:26,0 chr1 150122448 . A . PASS END=150122455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 150122456 . G . PASS END=150122457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 150122458 . A . PASS END=150122458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 150122459 . G . PASS END=150122464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 150122465 . T . PASS END=150122465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 150122466 . T . PASS END=150122472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 150122473 . A . PASS END=150122477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 150123102 . G . PASS END=150123102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150123103 . G . PASS END=150123103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150123104 . A . PASS END=150123113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150123114 . G . PASS END=150123121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,795:0,63,255:23,0 chr1 150123122 . G . PASS END=150123122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 150123123 . C . PASS END=150123123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 150123124 . A . PASS END=150123179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:30:0,82,1112:0,82,255:35,0 chr1 150123180 . T . PASS END=150123180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:32,0 chr1 150123181 . T . PASS END=150123182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 150123183 . A . PASS END=150123183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr1 150123184 . G . PASS END=150123205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1271:0,99,255:33,0 chr1 150123206 . T . PASS END=150123206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:28,0 chr1 150123207 . G . PASS END=150123207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 150123208 . T . PASS END=150123208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:26,0 chr1 150123209 . G . PASS END=150123210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 150123211 . T . PASS END=150123211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 150123212 . G . PASS END=150123215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 150123216 . A . PASS END=150123216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150123217 . A . PASS END=150123224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 150123225 . C . PASS END=150123248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:26,0 chr1 150128260 . G . PASS END=150128387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,106,1399:0,106,255:40,0 chr1 150128388 . G . PASS END=150128400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:35:0,89,1233:0,89,255:34,0 chr1 150129105 . G . PASS END=150129109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 150129110 . C . PASS END=150129114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 150129115 . T . PASS END=150129115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 150129116 . G . PASS END=150129117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 150129118 . T . PASS END=150129118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 150129119 . C . PASS END=150129137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,748:0,60,255:26,0 chr1 150129138 . G . PASS END=150129141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 150129142 . A . PASS END=150129142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr1 150129143 . G . PASS END=150129145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 150129146 . G . PASS END=150129146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:28,0 chr1 150129147 . G . PASS END=150129170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:34,0 chr1 150129171 . T . PASS END=150129171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:32,0 chr1 150129172 . C . PASS END=150129191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr1 150129192 . A . PASS END=150129192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,956:0,49,255:25,0 chr1 150129193 . A . PASS END=150129194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr1 150129195 . C . PASS END=150129197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 150129198 . A . PASS END=150129199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,903:0,48,255:26,0 chr1 150129200 . C . PASS END=150129202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150129203 . G . PASS END=150129208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 150129209 . G . PASS END=150129209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr1 150129555 . A . PASS END=150129564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:26,0 chr1 150129565 . G . PASS END=150129565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 150129566 . T . PASS END=150129566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 150129567 . A . PASS END=150129569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 150129570 . T . PASS END=150129570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 150129571 . C . PASS END=150129664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1094:0,84,255:34,0 chr1 150129665 . A . PASS END=150129680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,62,255:25,0 chr1 150131014 . G . PASS END=150131020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 150131021 . C . PASS END=150131049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,62,255:26,0 chr1 150131050 . G . PASS END=150131051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 150131052 . C . PASS END=150131069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 150131070 . C . PASS END=150131070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150131071 . C . PASS END=150131098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 150131099 . C . PASS END=150131099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150131100 . T . PASS END=150131100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 150131101 . G . PASS END=150131103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 150131104 . A . PASS END=150131104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 150131105 . G . PASS END=150131113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 150131114 . T . PASS END=150131115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150131116 . G . PASS END=150131122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 150131123 . A . PASS END=150131143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,1078:0,60,255:26,0 chr1 150131144 . C . PASS END=150131144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 150131145 . A . PASS END=150131173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:25,0 chr1 150131174 . G . PASS END=150131193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 150131194 . C . PASS END=150131201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr1 150131202 . C . PASS END=150131202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 150131203 . A . PASS END=150131206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150131207 . T . PASS END=150131207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,668:0,49,255:19,0 chr1 150131208 . C . PASS END=150131209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 150131210 . C . PASS END=150131225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,668:0,57,255:19,0 chr1 150131226 . A . PASS END=150131230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 150131231 . A . PASS END=150131231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150131232 . C . PASS END=150131235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150131236 . G . PASS END=150131236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 150131237 . G . PASS END=150131238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150131239 . G . PASS END=150131255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:17:0,43,590:0,43,255:17,0 chr1 150131256 . G . PASS END=150131257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr1 150131258 . C . PASS END=150131281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,540:0,40,255:18,0 chr1 150131282 . A . PASS END=150131282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 150131283 . G . PASS END=150131298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 150131299 . T . PASS END=150131299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 150131300 . C . PASS END=150131311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 150131312 . T . PASS END=150131312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 150131313 . C . PASS END=150131314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 150131315 . T . PASS END=150131315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:13,0 chr1 150131316 . A . PASS END=150131324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150131325 . G . PASS END=150131331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150131332 . G . PASS END=150131334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150131335 . T . PASS END=150131335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150131336 . C . PASS END=150131336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150131337 . T . PASS END=150131343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 150131344 . A . PASS END=150131344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:9,0 chr1 150131345 . C . PASS END=150131345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 150131346 . C . PASS END=150131353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 150131354 . T . PASS END=150131356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 150131357 . G . PASS END=150131364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 150131365 . G . PASS END=150131373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 150131374 . A . PASS END=150131374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr1 150131375 . C . PASS END=150131379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 150131380 . G . PASS END=150131380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:12,0 chr1 150131381 . C . PASS END=150131394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,599:0,48,255:17,0 chr1 150131395 . G . PASS END=150131395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 150131396 . G . PASS END=150131396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 150131397 . G . PASS END=150131397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 150131398 . C . PASS END=150131404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:19,0 chr1 150131405 . C . PASS END=150131405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:17,0 chr1 150131406 . C . PASS END=150131433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,668:0,43,255:19,0 chr1 150131434 . C . PASS END=150131436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 150131437 . G . PASS END=150131440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150131441 . A . PASS END=150131446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 150131447 . A . PASS END=150131447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 150131448 . G . PASS END=150131461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 150131462 . A . PASS END=150131462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 150131463 . G . PASS END=150131489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,809:0,66,255:23,0 chr1 150131490 . A . PASS END=150131493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 150131494 . G . PASS END=150131527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 150131528 . A . PASS END=150131530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150131531 . C . PASS END=150131551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,956:0,68,255:26,0 chr1 150131552 . C . PASS END=150131559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 150131560 . C . PASS END=150131560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 150131561 . T . PASS END=150131567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1082:0,90,255:31,0 chr1 150131568 . A . PASS END=150131568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 150131569 . G . PASS END=150131572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1087:0,93,255:32,0 chr1 150131573 . C . PASS END=150131573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr1 150131574 . A . PASS END=150131685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1166:0,83,255:40,0 chr1 150131686 . C . PASS END=150131687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 150131688 . G . PASS END=150131688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:22:33:0,22,1086:0,22,255:24,0 chr1 150131689 . C . PASS END=150131694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:28:0,60,900:0,84,255:26,0 chr1 150131695 . C . PASS END=150131718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 150192983 . T . PASS END=150193063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,162,255:40,0 chr1 150195512 . C . PASS END=150195620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:97:0,120,1800:0,252,255:40,0 chr1 150198940 . C . PASS END=150198967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,157,255:40,0 chr1 150198968 . A . PASS END=150198968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,10:64:3:64:0,3,1530:0,3,255:40,0 chr1 150198969 . G . PASS END=150199127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:40:0,100,1575:0,100,255:40,0 chr1 150201405 . C . PASS END=150201570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:84:39:0,84,1164:0,84,255:40,0 chr1 150202906 . C . PASS END=150203028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:89:30:0,89,1078:0,89,255:40,0 chr1 150204115 . T . PASS END=150204264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,99,1334:0,99,255:40,0 chr1 150208081 . C . PASS END=150208134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:88:35:0,88,1136:0,88,255:40,0 chr1 150230524 . A . PASS END=150230578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:44:0,83,1508:0,83,255:40,0 chr1 150232546 . G . PASS END=150232643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:62:0,120,1800:0,187,255:40,0 chr1 150232678 . C . PASS END=150232730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,115,1800:0,115,255:40,0 chr1 150233858 . G . PASS END=150234019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1172:0,89,255:40,0 chr1 150234020 . A . PASS END=150234037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 150234557 . T . PASS END=150234699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:34:0,84,1213:0,84,255:40,0 chr1 150234924 . C . PASS END=150235019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,99,1485:0,108,255:40,0 chr1 150235203 . G . PASS END=150235269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,136,255:40,0 chr1 150235441 . A . PASS END=150235598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:37:0,80,1234:0,80,255:40,0 chr1 150235698 . C . PASS END=150235818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:39:0,99,1485:0,110,255:40,0 chr1 150236058 . C . PASS END=150236078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,862:0,72,255:25,0 chr1 150236193 . G . PASS END=150236265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1138:0,83,255:40,0 chr1 150236266 . T . PASS END=150236271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1213:0,91,255:32,0 chr1 150236272 . G . PASS END=150236272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:30,0 chr1 150236273 . A . PASS END=150236277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1178:0,86,255:32,0 chr1 150236993 . G . PASS END=150237090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,137,255:40,0 chr1 150238530 . T . PASS END=150238594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1202:0,83,255:40,0 chr1 150238922 . T . PASS END=150239056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:38:0,97,1327:0,97,255:40,0 chr1 150239475 . C . PASS END=150239475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150239476 . A . PASS END=150239476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150239477 . G . PASS END=150239487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 150239488 . A . PASS END=150239488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 150239489 . G . PASS END=150239496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 150239497 . C . PASS END=150239497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 150239498 . T . PASS END=150239878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:31:0,84,1089:0,85,255:40,0 chr1 150240116 . C . PASS END=150240189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,102,1458:0,102,255:40,0 chr1 150240357 . T . PASS END=150240358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 150240359 . A . PASS END=150240359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr1 150240360 . A . PASS END=150240366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1217:0,86,255:33,0 chr1 150240367 . T . PASS END=150240367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:33,0 chr1 150240368 . G . PASS END=150240527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1215:0,87,255:40,2 chr1 150241098 . C . PASS END=150241107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 150241108 . G . PASS END=150241117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:12,0 chr1 150241118 . G . PASS END=150241118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 150241119 . C . PASS END=150241140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 150241141 . T . PASS END=150241170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,509:0,42,255:18,0 chr1 150241171 . A . PASS END=150241171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 150241172 . C . PASS END=150241172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 150241173 . G . PASS END=150241173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 150241174 . C . PASS END=150241176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 150241177 . C . PASS END=150241177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 150241178 . G . PASS END=150241179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 150241180 . A . PASS END=150241181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 150241182 . G . PASS END=150241183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 150241184 . G . PASS END=150241184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:15,0 chr1 150241185 . C . PASS END=150241189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 150241190 . G . PASS END=150241191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 150241192 . A . PASS END=150241202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:17,0 chr1 150241203 . G . LowGQ END=150241203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:4,0,255:15,0 chr1 150241204 . C . PASS END=150241209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 150241210 . T . PASS END=150241210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr1 150245221 . A . PASS END=150245266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,115,1800:0,115,255:40,0 chr1 150246490 . G . PASS END=150246573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:63:0,120,1800:0,169,255:40,0 chr1 150248150 . A . PASS END=150248208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,139,255:40,0 chr1 150248930 . A . PASS END=150249040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:43:0,120,1800:0,126,255:40,0 chr1 150252051 . C . PASS END=150252149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:53:0,120,1800:0,125,255:40,0 chr1 150253246 . G . PASS END=150253311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:73:0,120,1800:0,187,255:40,0 chr1 150255678 . A . PASS END=150255682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 150255683 . T . PASS END=150255683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 150255684 . T . PASS END=150255714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,545:0,48,255:19,0 chr1 150255715 . A . PASS END=150255715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:18,0 chr1 150255716 . C . PASS END=150255716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 150255717 . T . PASS END=150255719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150255720 . C . PASS END=150255720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 150255721 . T . PASS END=150255722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 150255723 . T . PASS END=150255723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr1 150255724 . C . PASS END=150255733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 150255734 . T . PASS END=150255734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr1 150255735 . C . PASS END=150255753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:22,0 chr1 150255754 . G . PASS END=150255754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 150255755 . T . PASS END=150255756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 150255757 . A . PASS END=150255757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 150255758 . C . PASS END=150255763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr1 150255764 . C . PASS END=150255765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:24,0 chr1 150255766 . T . PASS END=150255780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,929:0,75,255:26,0 chr1 150255781 . A . PASS END=150255781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:22,0 chr1 150255782 . G . PASS END=150255782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 150255783 . A . PASS END=150255783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,790:0,42,255:21,0 chr1 150255784 . G . PASS END=150255791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 150255792 . A . PASS END=150255793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,746:0,42,255:21,0 chr1 150255794 . G . PASS END=150255799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 150255800 . C . PASS END=150255800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:20,0 chr1 150255801 . C . PASS END=150255801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 150255802 . A . PASS END=150255802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 150255803 . T . PASS END=150255816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,65,255:25,0 chr1 150255817 . A . PASS END=150255817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,878:0,50,255:20,0 chr1 150255818 . C . PASS END=150255828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 150255829 . A . PASS END=150255830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:19,0 chr1 150255831 . A . PASS END=150255831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,714:0,14,255:19,0 chr1 150255832 . G . PASS END=150255832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:20,0 chr1 150255833 . G . PASS END=150255841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,793:0,69,255:24,0 chr1 150255842 . A . PASS END=150255842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 150255843 . C . PASS END=150255843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 150255844 . G . PASS END=150255883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,937:0,72,255:26,0 chr1 150255884 . G . PASS END=150255884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 150255885 . G . PASS END=150255898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 150255899 . G . PASS END=150255907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:32,0 chr1 150255908 . A . PASS END=150255908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:30,0 chr1 150255909 . T . PASS END=150255951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1127:0,80,255:32,0 chr1 150255952 . C . PASS END=150255952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150255953 . T . PASS END=150255953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150255954 . G . PASS END=150255954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 150255955 . G . PASS END=150255956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150255957 . G . PASS END=150255957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 150255958 . C . PASS END=150255959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150255960 . A . PASS END=150255960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 150255961 . A . PASS END=150255967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 150255968 . A . PASS END=150255968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 150255969 . A . PASS END=150255970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 150255971 . A . PASS END=150255978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 150255979 . A . PASS END=150255979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:23,0 chr1 150255980 . A . PASS END=150256006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,71,255:26,0 chr1 150256007 . T . PASS END=150256009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 150256010 . T . PASS END=150256010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:17,0 chr1 150256011 . A . PASS END=150256011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 150256012 . C . PASS END=150256020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:20,0 chr1 150256021 . G . PASS END=150256021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:19,0 chr1 150256022 . A . PASS END=150256027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 150256028 . G . PASS END=150256042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:19:0,42,534:0,43,255:19,0 chr1 150256043 . G . PASS END=150256043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 150256215 . T . PASS END=150256290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:58:0,120,1800:0,146,255:40,0 chr1 150256836 . G . PASS END=150256914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,99,1566:0,99,255:40,0 chr1 150257007 . G . PASS END=150257118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:93:40:0,93,1395:0,107,255:40,0 chr1 150258842 . C . PASS END=150258845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 150258846 . T . PASS END=150258846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150258847 . T . PASS END=150258848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,978:0,67,255:26,0 chr1 150258849 . C . PASS END=150258875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1180:0,84,255:38,0 chr1 150258876 . C . PASS END=150258892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,114,1457:0,114,255:40,0 chr1 150258893 . A . PASS END=150258893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:38,0 chr1 150258894 . T . PASS END=150259166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:35:0,86,1034:0,86,255:40,0 chr1 150259167 . T . PASS END=150259167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 150259168 . C . PASS END=150259362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1181:0,84,255:40,0 chr1 150259363 . C . PASS END=150259366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:33,0 chr1 150266787 . A . PASS END=150266869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:51:0,120,1800:0,137,255:40,0 chr1 150280482 . A . PASS END=150280498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,984:0,65,255:26,0 chr1 150280499 . G . PASS END=150280659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:30:0,83,1194:0,83,255:40,0 chr1 150280660 . T . PASS END=150280662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:33:0,78,1170:0,99,255:26,0 chr1 150293938 . T . PASS END=150293938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 150293951 . G . PASS END=150293951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 150293972 . T . PASS END=150293972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 150294010 . C . PASS END=150294010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 150297351 . A . PASS END=150297351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:59:0,120,1800:0,144,255:40,0 chr1 150297401 . A . PASS END=150297545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:87:36:0,87,1241:0,97,255:40,0 chr1 150298209 . A . PASS END=150298212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1142:0,99,255:34,0 chr1 150298213 . T . PASS END=150298213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1160:0,58,255:33,0 chr1 150298214 . C . PASS END=150298321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:32:0,86,1247:0,86,255:40,0 chr1 150298322 . A . PASS END=150298322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:28,0 chr1 150298323 . G . PASS END=150298329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:29,0 chr1 150298330 . A . PASS END=150298339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 150300779 . G . PASS END=150300779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 150300780 . A . PASS END=150300780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 150300781 . G . PASS END=150300791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,738:0,63,255:26,0 chr1 150300792 . A . PASS END=150300794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,902:0,81,255:27,0 chr1 150300795 . A . PASS END=150300795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150300796 . C . PASS END=150300802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150300803 . A . PASS END=150300803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:26,0 chr1 150300804 . T . PASS END=150300814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 150300815 . T . PASS END=150300815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 150300816 . C . PASS END=150300882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1135:0,83,255:36,0 chr1 150300883 . T . PASS END=150300883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 150300884 . G . PASS END=150300887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 150300888 . C . PASS END=150300901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr1 150300902 . C . PASS END=150300916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:18:0,42,630:0,47,255:19,0 chr1 150300917 . A . PASS END=150300925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,51,255:13,0 chr1 150305155 . A . PASS END=150305238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,143,255:40,0 chr1 150305437 . C . PASS END=150305437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 150305450 . C . PASS END=150305642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1169:0,80,255:39,0 chr1 150305643 . A . PASS END=150305652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1033:0,71,255:26,0 chr1 150305653 . C . PASS END=150305656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 150305657 . G . PASS END=150305663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 150305664 . C . PASS END=150305667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 150305668 . C . PASS END=150305670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:20,0 chr1 150307406 . G . PASS END=150307637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:32:0,86,1197:0,86,255:40,0 chr1 150307638 . C . PASS END=150307665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 150307666 . A . PASS END=150307666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 150307667 . T . PASS END=150307675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 150307676 . C . PASS END=150307676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:18,0 chr1 150307677 . A . PASS END=150307677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 150307678 . A . PASS END=150307679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 150307680 . T . PASS END=150307687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,884:0,61,255:21,0 chr1 150307688 . G . PASS END=150307688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 150307689 . A . PASS END=150307702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 150307703 . A . PASS END=150307712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,759:0,50,255:19,0 chr1 150310636 . G . PASS END=150310775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,99,1485:0,119,255:40,0 chr1 150310776 . T . PASS END=150310802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,945:0,62,255:26,0 chr1 150312874 . T . PASS END=150312953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:66:0,120,1800:0,144,255:40,0 chr1 150314506 . G . PASS END=150314519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:59:0,120,1800:0,142,255:40,0 chr1 150315783 . A . PASS END=150315783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1264:0,92,255:35,0 chr1 150315785 . T . PASS END=150315867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:98:37:0,98,1253:0,98,255:40,0 chr1 150315868 . G . PASS END=150315868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,6:69:70:69:0,70,1917:0,70,255:40,0 chr1 150315869 . C . PASS END=150315928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,107,1459:0,107,255:40,0 chr1 150316636 . A . PASS END=150316636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 150316638 . T . PASS END=150316737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:44:0,96,1508:0,96,255:40,0 chr1 150316751 . G . PASS END=150316751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 150316910 . A . PASS END=150317023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1215:0,104,255:40,0 chr1 150318494 . A . PASS END=150318576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1082:0,88,255:40,0 chr1 150318577 . T . PASS END=150318584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:34:0,75,1125:0,102,255:26,0 chr1 150318585 . G . PASS END=150318590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 150318591 . A . PASS END=150318592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,965:0,76,255:27,0 chr1 150318593 . C . PASS END=150318601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 150318602 . A . PASS END=150318612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,77,255:26,0 chr1 150318884 . G . PASS END=150318948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1235:0,81,255:40,0 chr1 150318949 . T . PASS END=150318949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:43:47:0,43,1232:0,43,255:39,0 chr1 150318950 . C . PASS END=150318967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,108,1287:0,108,255:40,0 chr1 150321633 . A . PASS END=150321694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,102,1530:0,140,255:40,0 chr1 150325294 . A . PASS END=150325294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 150325309 . G . PASS END=150325314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:24,0 chr1 150325315 . G . PASS END=150325318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 150325319 . A . PASS END=150325319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,861:0,64,255:26,0 chr1 150325320 . A . PASS END=150325328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,966:0,81,255:33,0 chr1 150325329 . C . PASS END=150325329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 150325330 . T . PASS END=150325441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1251:0,90,255:40,0 chr1 150325442 . A . PASS END=150325442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1213:0,56,255:33,0 chr1 150325443 . G . PASS END=150325446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:36,0 chr1 150325447 . A . PASS END=150325447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr1 150325448 . C . PASS END=150325455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1426:0,101,255:38,0 chr1 150325519 . A . PASS END=150325519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 150325598 . G . PASS END=150325598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 150325664 . T . PASS END=150325664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 150337191 . A . PASS END=150337197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 150337198 . C . PASS END=150337216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 150337217 . C . PASS END=150337217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 150337218 . A . PASS END=150337218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 150337219 . G . PASS END=150337232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 150337233 . T . PASS END=150337236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 150337237 . C . PASS END=150337237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 150337238 . G . PASS END=150337241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:22,0 chr1 150337242 . T . PASS END=150337242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 150337243 . C . PASS END=150337244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 150337245 . T . PASS END=150337245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 150337246 . C . PASS END=150337254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:30,0 chr1 150337255 . C . PASS END=150337361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1141:0,80,255:40,0 chr1 150337362 . A . PASS END=150337362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1278:0,70,255:29,0 chr1 150337363 . T . PASS END=150337376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1028:0,80,255:32,0 chr1 150337377 . A . PASS END=150337377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 150337378 . T . PASS END=150337379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 150337380 . A . PASS END=150337380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 150337381 . A . PASS END=150337384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 150337385 . G . PASS END=150337386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,930:0,76,255:27,0 chr1 150337387 . T . PASS END=150337389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 150337390 . G . PASS END=150337393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1035:0,77,255:27,0 chr1 150337394 . A . PASS END=150337394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,872:0,54,255:23,0 chr1 150337395 . T . PASS END=150337395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 150390072 . C . PASS END=150390201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:29:0,83,1216:0,83,255:40,0 chr1 150413399 . G . PASS END=150413522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:33:0,99,1247:0,99,255:40,0 chr1 150414357 . G . PASS END=150414434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:65:0,120,1800:0,165,255:40,0 chr1 150415707 . C . PASS END=150415759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,208,255:40,0 chr1 150416727 . T . PASS END=150416728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 150416729 . T . PASS END=150416748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1020:0,90,255:30,0 chr1 150416749 . T . PASS END=150416749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 150416750 . G . PASS END=150416824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1188:0,96,255:40,0 chr1 150416825 . C . PASS END=150416839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 150416840 . C . PASS END=150416853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,56,255:18,0 chr1 150418702 . A . PASS END=150418877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,105,1381:0,112,255:40,0 chr1 150429764 . G . PASS END=150429766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:23,0 chr1 150429767 . T . PASS END=150429776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr1 150429777 . T . PASS END=150429778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 150429779 . G . PASS END=150429779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 150429780 . C . PASS END=150429791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,995:0,81,255:29,0 chr1 150429792 . A . PASS END=150429792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 150429793 . C . PASS END=150430003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1155:0,80,255:40,0 chr1 150430004 . A . PASS END=150430004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:30,0 chr1 150430005 . T . PASS END=150430013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 150430014 . C . PASS END=150430042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 150430043 . A . PASS END=150430046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150432536 . T . PASS END=150432536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 150432537 . C . PASS END=150432537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 150432538 . G . PASS END=150432541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 150432542 . A . PASS END=150432748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1151:0,87,255:40,0 chr1 150432749 . T . PASS END=150432764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,945:0,69,255:23,0 chr1 150432765 . C . PASS END=150432776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:18:0,49,662:0,49,255:18,0 chr1 150432777 . A . PASS END=150432777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 150432778 . G . PASS END=150432793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,593:0,40,255:19,0 chr1 150437003 . G . PASS END=150437007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:32,0 chr1 150437008 . A . PASS END=150437008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:31,0 chr1 150437009 . G . PASS END=150437186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:39:0,81,1215:0,110,255:40,0 chr1 150437187 . A . PASS END=150437188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:57:38:0,57,855:0,97,255:19,0 chr1 150437189 . C . PASS END=150437191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:35:0,60,900:0,105,255:21,0 chr1 150437192 . C . PASS END=150437203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:19:0,42,630:0,57,255:19,0 chr1 150443037 . G . PASS END=150443042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:26,0 chr1 150443043 . C . PASS END=150443046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 150443047 . T . PASS END=150443047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 150443048 . T . PASS END=150443273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1046:0,81,255:40,0 chr1 150443274 . T . PASS END=150443274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 150443275 . C . PASS END=150443459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1246:0,81,255:40,0 chr1 150443460 . A . PASS END=150443460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1232:0,47,255:31,0 chr1 150443461 . T . PASS END=150443486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1058:0,82,255:32,0 chr1 150443487 . A . PASS END=150443489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1001:0,62,255:25,0 chr1 150443490 . T . PASS END=150443491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 150443492 . C . PASS END=150443496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 150443497 . C . PASS END=150443497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 150443498 . C . PASS END=150443498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 150443499 . T . PASS END=150443499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150443500 . G . PASS END=150443500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 150443501 . A . PASS END=150443502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 150443503 . C . PASS END=150443504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 150443505 . G . PASS END=150443514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1141:0,82,255:29,0 chr1 150443515 . C . PASS END=150443521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150443522 . C . PASS END=150443528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 150443529 . A . PASS END=150443529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 150443530 . G . PASS END=150443530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 150443531 . A . PASS END=150443531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 150443532 . G . PASS END=150443539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 150443540 . T . PASS END=150443540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 150443541 . C . PASS END=150443546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 150443547 . T . PASS END=150443547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr1 150443548 . C . PASS END=150443548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 150443549 . C . PASS END=150443549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 150443550 . A . PASS END=150443551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 150443552 . C . PASS END=150443552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:27,0 chr1 150443553 . G . PASS END=150443575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1161:0,80,255:31,0 chr1 150443576 . G . PASS END=150443576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1024:0,60,255:28,0 chr1 150443577 . A . PASS END=150443577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 150443578 . C . PASS END=150443578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 150443579 . A . PASS END=150444087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:32:0,82,1037:0,82,255:40,1 chr1 150444088 . C . PASS END=150444088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1356:0,79,255:36,0 chr1 150444089 . T . PASS END=150444491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:38:0,96,1440:0,113,255:40,0 chr1 150444492 . A . PASS END=150444492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:32,0 chr1 150444493 . T . PASS END=150444511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1205:0,88,255:32,0 chr1 150444512 . C . PASS END=150444516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 150444517 . C . PASS END=150444522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:29,0 chr1 150444523 . C . PASS END=150444523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 150444524 . A . PASS END=150444528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 150444529 . A . PASS END=150444529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1061:0,46,255:26,0 chr1 150444530 . A . PASS END=150444637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1125:0,80,255:40,0 chr1 150444638 . T . PASS END=150444638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1349:0,73,255:35,0 chr1 150444639 . T . PASS END=150444652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1327:0,95,255:37,0 chr1 150444653 . A . PASS END=150444653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1235:0,78,255:33,0 chr1 150444654 . G . PASS END=150444751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,84,255:39,0 chr1 150444752 . C . PASS END=150444756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 150444757 . T . PASS END=150444757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150444758 . C . PASS END=150444767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 150444768 . G . PASS END=150444770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1005:0,87,255:29,0 chr1 150444771 . A . PASS END=150444771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr1 150444772 . T . PASS END=150444772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 150444773 . A . PASS END=150444773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,927:0,70,255:28,0 chr1 150444774 . G . PASS END=150444775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 150444776 . G . PASS END=150444776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 150444777 . G . PASS END=150444779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150444780 . A . PASS END=150444780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:26,0 chr1 150444781 . T . PASS END=150444784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 150444785 . C . PASS END=150444785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:27,0 chr1 150444786 . G . PASS END=150444788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 150444789 . A . PASS END=150444791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 150444792 . C . PASS END=150444793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 150444794 . T . PASS END=150444801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:29:0,62,1080:0,62,255:26,0 chr1 150444802 . G . PASS END=150444804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150444805 . T . PASS END=150444809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 150444810 . T . PASS END=150444811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150444812 . G . PASS END=150444812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150444813 . A . PASS END=150444813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:25,0 chr1 150444814 . T . PASS END=150444832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,67,255:26,0 chr1 150444833 . T . PASS END=150444835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,59,255:19,0 chr1 150444836 . T . PASS END=150444854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,65,255:22,0 chr1 150444855 . G . PASS END=150444855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 150444856 . T . PASS END=150444859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 150444860 . T . PASS END=150444860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 150444861 . C . PASS END=150444863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 150444864 . A . PASS END=150444865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 150444866 . T . PASS END=150444894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,807:0,66,255:26,0 chr1 150444895 . A . PASS END=150444912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:29,0 chr1 150444913 . A . PASS END=150444913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 150444914 . A . PASS END=150444933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 150444934 . G . PASS END=150444934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 150444935 . G . PASS END=150444936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 150444937 . A . PASS END=150444937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 150444938 . C . PASS END=150444941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150444942 . A . PASS END=150444948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 150444949 . G . PASS END=150444954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1111:0,84,255:30,0 chr1 150444955 . T . PASS END=150444955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 150444956 . G . PASS END=150444988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1216:0,83,255:35,0 chr1 150444989 . A . PASS END=150444989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:33,0 chr1 150444990 . C . PASS END=150444995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 150444996 . A . PASS END=150444996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 150444997 . G . PASS END=150445001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1239:0,86,255:33,0 chr1 150445002 . A . PASS END=150445002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:31,0 chr1 150445003 . T . PASS END=150445013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:31,0 chr1 150445014 . C . PASS END=150445015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 150445016 . C . PASS END=150445029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 150445030 . G . PASS END=150445030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 150445031 . A . PASS END=150445037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 150445038 . T . PASS END=150445038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr1 150445039 . C . PASS END=150445056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1133:0,89,255:32,0 chr1 150445057 . G . PASS END=150445057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 150445058 . C . PASS END=150445062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 150445063 . A . PASS END=150445063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 150445064 . T . PASS END=150445069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1123:0,80,255:29,0 chr1 150445070 . C . PASS END=150445070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 150445071 . C . PASS END=150445074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 150445075 . T . PASS END=150445075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,989:0,54,255:30,0 chr1 150445076 . G . PASS END=150445076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 150445077 . T . PASS END=150445077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 150445078 . C . PASS END=150445082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 150445083 . C . PASS END=150445083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 150445084 . T . PASS END=150445090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 150445091 . C . PASS END=150445120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,962:0,70,255:26,0 chr1 150445121 . A . PASS END=150445121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 150445122 . C . PASS END=150445134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 150445135 . T . PASS END=150445135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 150445136 . G . PASS END=150445152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:24,0 chr1 150445153 . C . PASS END=150445154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 150445155 . T . PASS END=150445171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,892:0,61,255:26,0 chr1 150445172 . C . PASS END=150445175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:25:0,48,720:0,58,255:19,0 chr1 150445176 . C . PASS END=150445176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:15,0 chr1 150445177 . C . PASS END=150445177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:25:0,48,720:0,75,255:16,0 chr1 150445178 . C . PASS END=150445178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:15,0 chr1 150445179 . A . PASS END=150445186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,52,255:16,0 chr1 150445187 . C . PASS END=150445187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 150445188 . C . PASS END=150445193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 150445194 . C . PASS END=150445194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 150445195 . T . PASS END=150445203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 150445204 . A . PASS END=150445204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,492:0,12,255:13,0 chr1 150445205 . G . PASS END=150445205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150445206 . A . PASS END=150445206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,463:0,15,255:12,0 chr1 150445207 . G . PASS END=150445208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 150445209 . A . PASS END=150445211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150445212 . G . PASS END=150445212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:12,0 chr1 150445213 . T . PASS END=150445215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150445216 . A . PASS END=150445216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr1 150445217 . A . PASS END=150445217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150445218 . T . PASS END=150445220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 150445221 . C . PASS END=150445227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 150445228 . T . PASS END=150445228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 150445229 . A . PASS END=150445229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 150445230 . C . PASS END=150445230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 150445231 . C . PASS END=150445231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150445232 . C . PASS END=150445233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150445234 . A . PASS END=150445234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150445235 . C . PASS END=150445236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 150445237 . T . PASS END=150445238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,543:0,34,255:14,0 chr1 150445239 . C . PASS END=150445239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150445240 . T . LowGQ END=150445240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:4,0,255:13,0 chr1 150445241 . C . PASS END=150445248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 150445249 . T . PASS END=150445249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 150445250 . C . PASS END=150445251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 150445252 . T . PASS END=150445252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr1 150445253 . G . PASS END=150445253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 150445254 . G . PASS END=150445254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 150445255 . G . PASS END=150445256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 150445257 . A . PASS END=150445258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,504:0,31,255:16,0 chr1 150445259 . C . PASS END=150445263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,665:0,41,255:17,0 chr1 150445264 . C . PASS END=150445264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 150445265 . A . PASS END=150445274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 150445275 . G . PASS END=150445275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 150445276 . G . PASS END=150445284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr1 150445285 . C . PASS END=150445285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 150445286 . C . PASS END=150445288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150445289 . T . PASS END=150445289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:14,0 chr1 150445290 . T . PASS END=150445290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150445291 . T . PASS END=150445291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:14,0 chr1 150445292 . T . PASS END=150445309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 150445310 . C . PASS END=150445310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 150445311 . C . PASS END=150445326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 150445327 . C . PASS END=150445331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150445332 . G . PASS END=150445365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 150445366 . G . PASS END=150445366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,410:0,8,255:12,0 chr1 150445367 . C . PASS END=150445388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 150445389 . C . PASS END=150445389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 150445390 . A . PASS END=150445392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 150445393 . A . PASS END=150445393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 150445394 . T . PASS END=150445408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,421:0,39,255:13,0 chr1 150445409 . A . PASS END=150445409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,459:0,14,255:13,0 chr1 150445410 . G . PASS END=150445472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,521:0,45,255:19,0 chr1 150445473 . G . PASS END=150445475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150445476 . G . PASS END=150445476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 150445477 . C . PASS END=150445479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 150445480 . C . PASS END=150445481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:20:0,50,775:0,50,255:20,0 chr1 150445482 . C . PASS END=150445529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,764:0,63,255:23,0 chr1 150445530 . T . PASS END=150445531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150445532 . A . PASS END=150445535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 150445536 . T . PASS END=150445546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 150445547 . T . PASS END=150445547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,521:0,27,255:14,0 chr1 150445548 . C . PASS END=150445571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,543:0,41,255:15,0 chr1 150445572 . A . PASS END=150445572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 150445573 . T . PASS END=150445578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 150445579 . A . PASS END=150445583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150445584 . G . PASS END=150445589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150445590 . G . PASS END=150445604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 150445605 . G . PASS END=150445606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150445607 . A . PASS END=150445624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 150445625 . C . PASS END=150445626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 150445627 . C . PASS END=150445630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 150445631 . C . PASS END=150445637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 150445638 . A . PASS END=150445638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:15,0 chr1 150445639 . C . PASS END=150445639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 150445640 . A . PASS END=150445640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 150445641 . C . PASS END=150445654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 150445655 . G . PASS END=150445656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 150445657 . T . PASS END=150445658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150445659 . T . PASS END=150445662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,585:0,35,255:13,0 chr1 150445663 . C . PASS END=150445697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr1 150445698 . A . PASS END=150445708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150445709 . A . PASS END=150445709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 150445710 . G . PASS END=150445715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 150445716 . A . PASS END=150445716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 150445717 . C . PASS END=150445729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,664:0,63,255:22,0 chr1 150445730 . T . PASS END=150445730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 150445731 . T . PASS END=150445731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 150445732 . A . PASS END=150445754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,748:0,62,255:26,0 chr1 150445755 . C . PASS END=150445760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 150445761 . G . PASS END=150445781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 150445782 . A . PASS END=150445793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 150445794 . T . PASS END=150445794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 150445795 . C . PASS END=150445795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 150445796 . C . PASS END=150445810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 150459927 . A . PASS END=150459934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:25,0 chr1 150459935 . G . PASS END=150459939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 150459940 . A . PASS END=150459940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 150459941 . G . PASS END=150459951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 150459952 . G . PASS END=150459952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,996:0,51,255:29,0 chr1 150459953 . T . PASS END=150459967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,913:0,89,255:31,0 chr1 150459968 . T . PASS END=150459968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,908:0,76,255:28,0 chr1 150459969 . T . PASS END=150459980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 150459981 . A . PASS END=150459992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:23,0 chr1 150460334 . G . PASS END=150460341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 150460342 . G . PASS END=150460342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150460343 . T . PASS END=150460343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 150460344 . C . PASS END=150460353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:24,0 chr1 150460354 . A . PASS END=150460354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 150460355 . C . PASS END=150460358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1009:0,81,255:28,0 chr1 150460359 . G . PASS END=150460359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 150460360 . G . PASS END=150460367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1081:0,93,255:35,0 chr1 150460368 . A . PASS END=150460368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1247:0,56,255:35,0 chr1 150460369 . G . PASS END=150460373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:37:0,83,1305:0,83,255:38,0 chr1 150460374 . T . PASS END=150460374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1235:0,59,255:36,0 chr1 150460375 . T . PASS END=150460421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:98:38:0,98,1269:0,98,255:40,0 chr1 150460422 . G . PASS END=150460422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1676:0,78,255:40,0 chr1 150460423 . C . PASS END=150460508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,98,255:40,0 chr1 150460509 . A . PASS END=150460526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:26,0 chr1 150460527 . T . PASS END=150460530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:19,0 chr1 150461440 . T . PASS END=150461455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:25,0 chr1 150461456 . A . PASS END=150461456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 150461457 . C . PASS END=150461459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 150461460 . C . PASS END=150461484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,909:0,64,255:26,0 chr1 150461485 . A . PASS END=150461489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 150461490 . A . PASS END=150461535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,63,255:25,0 chr1 150461536 . G . PASS END=150461563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,713:0,47,255:19,0 chr1 150461569 . T . PASS END=150461569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150463077 . G . PASS END=150463095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr1 150463096 . C . PASS END=150463096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 150463097 . C . PASS END=150463100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,870:0,69,255:24,0 chr1 150463101 . G . PASS END=150463111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:28,0 chr1 150463112 . A . PASS END=150463112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 150463113 . G . PASS END=150463115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 150463116 . G . PASS END=150463135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr1 150463136 . T . PASS END=150463136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 150463137 . G . PASS END=150463138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150463139 . T . PASS END=150463139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150463140 . C . PASS END=150463140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 150463141 . T . PASS END=150463141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:27,0 chr1 150463142 . C . PASS END=150463143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150463144 . G . PASS END=150463145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 150463146 . A . PASS END=150463146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 150463147 . G . PASS END=150463193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,615:0,68,255:26,0 chr1 150463194 . A . PASS END=150463201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 150463870 . G . PASS END=150463880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 150463881 . G . PASS END=150463882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 150463883 . T . PASS END=150463883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 150463884 . C . PASS END=150463889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 150463890 . T . PASS END=150463890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 150463891 . G . PASS END=150463892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150463893 . C . PASS END=150463985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,909:0,67,255:26,0 chr1 150463986 . A . PASS END=150463986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 150463987 . G . PASS END=150463987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 150464074 . G . PASS END=150464128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,94,255:38,0 chr1 150464129 . C . PASS END=150464138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:33:0,60,900:0,86,255:23,0 chr1 150464141 . A . PASS END=150464141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 150464887 . G . PASS END=150464954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1000:0,81,255:33,0 chr1 150464955 . A . PASS END=150464955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 150464956 . G . PASS END=150464957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 150464958 . T . PASS END=150464965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 150468958 . A . PASS END=150468977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,878:0,61,255:26,0 chr1 150468978 . G . PASS END=150469044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,881:0,81,255:38,0 chr1 150469045 . A . PASS END=150469046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:35,0 chr1 150469047 . G . PASS END=150469098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:35:0,82,1233:0,82,255:37,0 chr1 150469099 . G . PASS END=150469102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 150469103 . A . PASS END=150469104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:27,0 chr1 150469286 . G . PASS END=150469384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:40:0,80,1320:0,80,255:40,0 chr1 150470006 . G . PASS END=150470018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1054:0,84,255:38,0 chr1 150470019 . A G, 50.00 PASS DP=39;MQ=249.23;MQRankSum=4.791;ReadPosRankSum=1.812;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,20,0:0.513,0.000:39:10,8,0:9,12,0:48:85,0,50,715,680,1395:255,0,255:19,0:5.0000e+01,6.5492e-05,5.2946e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,5,11,9:11,8,11,9 chr1 150470020 . T . PASS END=150470056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,117,1362:0,117,255:40,0 chr1 150470057 . T . PASS END=150470206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1111:0,87,255:40,0 chr1 150470207 . A . PASS END=150470217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:21,0 chr1 150470218 . A . PASS END=150470222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150470223 . G . PASS END=150470223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:17,0 chr1 150470978 . C . PASS END=150470982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 150470983 . T . PASS END=150471002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:31,0 chr1 150471003 . T . PASS END=150471003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 150471004 . C . PASS END=150471140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1186:0,87,255:40,0 chr1 150471373 . C . PASS END=150471393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,900:0,72,255:26,0 chr1 150471394 . T . PASS END=150471394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 150471395 . G . PASS END=150471432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,987:0,80,255:33,0 chr1 150471433 . T . PASS END=150471433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 150471434 . T . PASS END=150471434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 150471435 . C . PASS END=150471435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:32,0 chr1 150471436 . T . PASS END=150471480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:35,0 chr1 150471481 . G . PASS END=150471505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,74,255:26,0 chr1 150471506 . A . PASS END=150471510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:49:22:0,49,729:0,49,255:19,0 chr1 150471692 . G . PASS END=150471769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:42:0,96,1541:0,96,255:40,0 chr1 150476811 . A . PASS END=150476911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:39:0,93,1352:0,100,255:40,0 chr1 150477108 . G . PASS END=150477108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 150477109 . C . PASS END=150477110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,742:0,66,255:22,0 chr1 150477111 . G . PASS END=150477111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 150477112 . G . PASS END=150477112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 150477113 . C . PASS END=150477113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 150477114 . G . PASS END=150477121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,939:0,64,255:25,0 chr1 150477122 . T . PASS END=150477122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,766:0,31,255:24,0 chr1 150477123 . G . PASS END=150477124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,885:0,64,255:25,0 chr1 150477125 . A . PASS END=150477125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr1 150477126 . G . PASS END=150477128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 150477129 . T . PASS END=150477131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150477132 . A . PASS END=150477134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1023:0,71,255:28,0 chr1 150477135 . C . PASS END=150477142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr1 150477143 . A . PASS END=150477144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 150477145 . C . PASS END=150477145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr1 150477146 . G . PASS END=150477146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 150477147 . A . PASS END=150477148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 150477149 . C . PASS END=150477150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 150477151 . G . PASS END=150477151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 150477152 . T . PASS END=150477152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 150477153 . G . PASS END=150477163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1155:0,80,255:28,0 chr1 150477164 . T . PASS END=150477164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:27,0 chr1 150477165 . G . PASS END=150477170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 150477171 . A . PASS END=150477171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 150477172 . C . PASS END=150477174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 150477175 . T . PASS END=150477175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 150477176 . T . PASS END=150477185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 150477186 . G . PASS END=150477186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 150477187 . G . PASS END=150477191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 150477192 . A . PASS END=150477192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 150477193 . A . PASS END=150477194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 150477195 . C . PASS END=150477195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 150477196 . T . PASS END=150477207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1103:0,87,255:30,0 chr1 150477208 . T . PASS END=150477208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 150477209 . G . PASS END=150477209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 150477382 . G . PASS END=150477394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,115,1529:0,115,255:40,0 chr1 150477395 . T . PASS END=150477395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:39,0 chr1 150477396 . C . PASS END=150477454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:38:0,97,1236:0,97,255:40,0 chr1 150478067 . G . PASS END=150478069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 150478070 . C . PASS END=150478070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 150478071 . A . PASS END=150478075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr1 150478076 . A . PASS END=150478076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 150478077 . G . PASS END=150478085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 150478086 . C . PASS END=150478099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:29,0 chr1 150478100 . A . PASS END=150478100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 150478101 . G . PASS END=150478141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1066:0,86,255:33,0 chr1 150478142 . A . PASS END=150478142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 150478143 . T . PASS END=150478147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 150478148 . C . PASS END=150478173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,828:0,71,255:26,0 chr1 150478174 . T . PASS END=150478174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 150478175 . C . PASS END=150478181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 150479392 . T . PASS END=150479392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,727:0,50,255:21,0 chr1 150479393 . G . PASS END=150479397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,717:0,66,255:22,0 chr1 150479398 . G . PASS END=150479398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 150479399 . C . PASS END=150479402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 150479403 . A . PASS END=150479403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:23,0 chr1 150479404 . A . PASS END=150479445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,870:0,62,255:26,0 chr1 150479446 . A . PASS END=150479449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 150479450 . T . PASS END=150479451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150479452 . G . PASS END=150479457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150479458 . G . PASS END=150479459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150479460 . G . PASS END=150479482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 150479483 . G . PASS END=150479483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 150479484 . C . PASS END=150479484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150479485 . A . PASS END=150479485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 150479486 . G . PASS END=150479486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150479487 . C . PASS END=150479487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 150479488 . G . PASS END=150479488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 150479489 . A . PASS END=150479489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 150479490 . C . PASS END=150479497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 150479498 . G . PASS END=150479514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 150479515 . T . PASS END=150479515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:20,0 chr1 150479516 . C . PASS END=150479520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 150479521 . A . PASS END=150479521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 150479522 . T . PASS END=150479525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr1 150479526 . G . PASS END=150479526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 150479527 . A . PASS END=150479527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 150479528 . A . PASS END=150479528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 150479529 . G . PASS END=150479529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 150479530 . A . PASS END=150479530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 150479531 . A . PASS END=150479540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 150480686 . A . PASS END=150480755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,100,1458:0,100,255:40,0 chr1 150482007 . G . PASS END=150482012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1163:0,90,255:30,0 chr1 150482013 . C . PASS END=150482013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:28,0 chr1 150482014 . G . PASS END=150482014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 150482015 . G . PASS END=150482057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:30:0,86,1213:0,86,255:39,0 chr1 150482137 . T . PASS END=150482171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,548:0,43,255:19,0 chr1 150482172 . C . PASS END=150482183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 150482184 . A . PASS END=150482203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,449:0,36,255:12,0 chr1 150482204 . T . PASS END=150482215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:10:0,20,360:0,20,255:9,0 chr1 150482216 . T . LowGQ END=150482216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:8,0 chr1 150482217 . C . PASS END=150482238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,282:0,27,255:9,0 chr1 150482311 . G . PASS END=150482352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 150482353 . G . PASS END=150482353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 150482354 . G . PASS END=150482358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150482359 . G . PASS END=150482364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 150482365 . G . PASS END=150482365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 150482366 . G . PASS END=150482371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150482372 . C . PASS END=150482377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 150482378 . A . PASS END=150482379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 150482380 . A . PASS END=150482384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,459:0,39,255:13,0 chr1 150482385 . C . PASS END=150482385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 150482386 . C . PASS END=150482394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr1 150482395 . T . PASS END=150482395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:9,0 chr1 150482396 . A . PASS END=150482435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,459:0,39,255:13,0 chr1 150482436 . C . PASS END=150482437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 150482438 . G . PASS END=150482455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 150482456 . C . PASS END=150482458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:13:0,23,405:0,23,255:9,0 chr1 150482459 . A . PASS END=150482461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 150482462 . C . PASS END=150482478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 150482578 . T . PASS END=150482584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 150482585 . C . PASS END=150482585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 150482586 . C . PASS END=150482589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 150482590 . T . PASS END=150482590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr1 150482591 . C . PASS END=150482614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:13,0 chr1 150482615 . A . PASS END=150482615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 150482616 . A . PASS END=150482643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,332:0,38,255:13,0 chr1 150482644 . A . PASS END=150482644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 150482645 . T . PASS END=150482653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 150482654 . G . PASS END=150482654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 150482655 . G . PASS END=150482658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 150483352 . G . PASS END=150483354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 150483355 . C T, 44.26 PASS DP=19;MQ=250.00;MQRankSum=3.377;ReadPosRankSum=2.500;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,6,0:0.316,0.000:19:8,4,0:5,2,0:44:79,0,50,207,465,672:167,0,255:12,0:4.4263e+01,1.8457e-04,5.3000e+01,2.0664e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,5,1:3,10,5,1 chr1 150483356 . G . PASS END=150483360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 150483361 . C . PASS END=150483388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 150483389 . A . PASS END=150483389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 150483390 . C . PASS END=150483392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150483393 . G . PASS END=150483394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150483395 . G . PASS END=150483399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 150483400 . G . PASS END=150483400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 150483401 . G . PASS END=150483402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,914:0,72,255:24,0 chr1 150483403 . A . PASS END=150483403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 150483404 . T . PASS END=150483410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr1 150483411 . C . PASS END=150483415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 150483416 . C . PASS END=150483425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 150483426 . G . PASS END=150483642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1177:0,80,255:39,0 chr1 150483643 . A . PASS END=150483643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:27,0 chr1 150483644 . C . PASS END=150483645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 150483646 . C . PASS END=150483646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 150483647 . A . PASS END=150483648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 150483649 . A . PASS END=150483649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,828:0,56,255:24,0 chr1 150483650 . C . PASS END=150483667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,986:0,67,255:26,0 chr1 150483668 . A . PASS END=150483668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 150483669 . C . PASS END=150483674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 150483933 . T . PASS END=150483938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 150483939 . G . PASS END=150483967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,620:0,48,255:19,0 chr1 150483968 . G . PASS END=150484015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr1 150484016 . G . PASS END=150484076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1078:0,84,255:32,0 chr1 150484077 . C . PASS END=150484077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 150484078 . C . PASS END=150484087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 150484088 . G . PASS END=150484094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr1 150484095 . A . PASS END=150484095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:25,0 chr1 150484096 . T . PASS END=150484099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 150484100 . C . PASS END=150484100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 150484101 . T . PASS END=150484115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:29,0 chr1 150484116 . C . PASS END=150484116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 150484117 . C . PASS END=150484128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 150484129 . G . PASS END=150484146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 150484147 . A . PASS END=150484151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:23:0,44,855:0,44,255:19,0 chr1 150484152 . A . PASS END=150484153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 150484154 . G . PASS END=150484156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 150484157 . C . PASS END=150484157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 150484158 . A . PASS END=150484185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,50,255:19,0 chr1 150484186 . T . PASS END=150484186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:17,0 chr1 150484187 . G . PASS END=150484187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150484188 . C . PASS END=150484188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150484189 . C . PASS END=150484239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,44,255:19,0 chr1 150484240 . T . PASS END=150484290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,398:0,33,255:12,0 chr1 150484291 . C . LowGQ END=150484291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 150484292 . C . PASS END=150484302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:8,0 chr1 150484303 . A . PASS END=150484307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 150484828 . T . LowGQ END=150484832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:10:0,0,292:2,0,255:11,1 chr1 150484833 . G . PASS END=150484851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,413:0,33,255:12,0 chr1 150484852 . T . PASS END=150484852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 150484853 . G . PASS END=150484854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 150484855 . G . PASS END=150484869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr1 150484870 . G . PASS END=150484871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 150484872 . G . PASS END=150484875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150484876 . A . PASS END=150484885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:23,0 chr1 150484886 . A . PASS END=150484886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 150484887 . C . PASS END=150484891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 150484892 . G . PASS END=150484892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 150484893 . T . PASS END=150484941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:23,0 chr1 150484942 . G . PASS END=150484944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150484945 . C . PASS END=150484949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150484950 . C . PASS END=150484950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150484951 . C . PASS END=150484954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 150484955 . A . PASS END=150484958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150484959 . T . PASS END=150484962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 150484963 . C . PASS END=150484963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:17,0 chr1 150484964 . G . PASS END=150484968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150484969 . A . PASS END=150484972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 150484973 . T . PASS END=150484973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 150484974 . G . PASS END=150484974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 150484975 . A . PASS END=150484975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 150484976 . C . PASS END=150484979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 150484980 . T . PASS END=150484980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:20,0 chr1 150484981 . G . PASS END=150484986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150484987 . G A, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=2.286;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,14,0:0.636,0.000:22:5,4,0:3,10,0:47:85,0,46,493,286,779:255,0,244:8,0:5.0000e+01,9.3190e-05,4.9401e+01,4.5000e+02,3.2087e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,8,6:3,5,2,12 chr1 150484988 . G . PASS END=150484988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150484989 . T . PASS END=150484989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr1 150484990 . C . PASS END=150484993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150484994 . T . PASS END=150484994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150484995 . C . PASS END=150484997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150484998 . C . PASS END=150485004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,727:0,47,255:19,0 chr1 150485005 . C . PASS END=150485005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:15,0 chr1 150485006 . T . PASS END=150485013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,46,255:16,0 chr1 150485014 . C . PASS END=150485015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 150485016 . C . PASS END=150485024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150485025 . A . PASS END=150485025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 150485026 . A . PASS END=150485027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 150485028 . C . PASS END=150485034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 150485035 . G . PASS END=150485035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 150485036 . T . PASS END=150485041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:18,0 chr1 150485042 . C . PASS END=150485042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 150485043 . C . PASS END=150485048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 150485201 . T . PASS END=150485256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1158:0,83,255:35,0 chr1 150485257 . T . PASS END=150485257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:31,0 chr1 150485258 . T . PASS END=150485275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1202:0,83,255:33,0 chr1 150485276 . T . PASS END=150485288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1022:0,68,255:26,0 chr1 150485712 . G . PASS END=150485713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 150485714 . A . PASS END=150485721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150485722 . T . PASS END=150485735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:17,0 chr1 150485736 . G . PASS END=150485765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:29,0 chr1 150485766 . C . PASS END=150485843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1056:0,80,255:33,0 chr1 150485844 . T . PASS END=150485848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,1009:0,73,255:28,0 chr1 150485849 . T . PASS END=150485849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 150485850 . G . PASS END=150485855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 150485856 . A . PASS END=150485857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150485858 . A . PASS END=150485858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 150485859 . C . PASS END=150485865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 150485866 . A . PASS END=150485870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:26,0 chr1 150485871 . C . PASS END=150485872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150485873 . A . PASS END=150485873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:26,0 chr1 150485874 . G . PASS END=150485874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150485875 . G . PASS END=150485904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr1 150485905 . A . PASS END=150485909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 150485910 . T . PASS END=150485910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 150485911 . A . PASS END=150485911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr1 150485912 . T . PASS END=150485912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 150485913 . C . PASS END=150485915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 150485916 . C . PASS END=150485919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 150485920 . A . PASS END=150485921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 150485922 . C . PASS END=150485943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,860:0,66,255:23,0 chr1 150521898 . C . PASS END=150521898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 150522356 . G . PASS END=150522356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 150522766 . A . PASS END=150522766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,280:0,6,255:10,0 chr1 150522767 . T . PASS END=150522772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 150522773 . T . PASS END=150522773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 150522774 . G . PASS END=150522785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:12,0 chr1 150522786 . A . PASS END=150522796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 150522797 . T . PASS END=150522797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 150522798 . G . PASS END=150522811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 150522812 . C . PASS END=150522813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 150522814 . G . PASS END=150522814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 150522815 . C . LowGQ END=150522815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,434:2,0,255:10,0 chr1 150522816 . G . PASS END=150522817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:11,0 chr1 150522818 . A . LowGQ END=150522818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,416:5,0,255:9,0 chr1 150522819 . G . PASS END=150522820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 150522821 . G . PASS END=150522822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150522823 . A . LowGQ END=150522823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,355:8,0,255:11,0 chr1 150522824 . G . PASS END=150522826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 150522827 . T . PASS END=150522827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 150522828 . G . PASS END=150522831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 150522832 . T . PASS END=150522832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,516:0,4,255:12,0 chr1 150522833 . G . PASS END=150522834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 150522835 . G . PASS END=150522835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,532:0,4,255:12,1 chr1 150522836 . A . PASS END=150522886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:18,0 chr1 150522887 . A . PASS END=150522887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 150522888 . C . PASS END=150522890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 150522891 . C . PASS END=150522891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 150522892 . C . PASS END=150522942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,762:0,60,255:26,0 chr1 150522943 . G . PASS END=150522951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150522952 . T . PASS END=150522952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150522953 . A . PASS END=150522953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:22,0 chr1 150522954 . C . PASS END=150522986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,857:0,62,255:26,0 chr1 150522987 . A . PASS END=150522990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,895:0,81,255:28,0 chr1 150522991 . C . PASS END=150522991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 150522992 . T . PASS END=150523002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:29,0 chr1 150523003 . G . PASS END=150523003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 150523004 . A . PASS END=150523004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 150523005 . G . PASS END=150523005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 150523006 . A . PASS END=150523027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1103:0,90,255:30,0 chr1 150523028 . A . PASS END=150523035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,80,255:26,0 chr1 150523036 . T . PASS END=150523036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 150523037 . C . PASS END=150523038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 150523039 . G . PASS END=150523056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1177:0,80,255:30,0 chr1 150523057 . G . PASS END=150523059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 150523060 . G . PASS END=150523065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150523066 . A . PASS END=150523105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr1 150523106 . T . PASS END=150523106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 150523107 . C . PASS END=150523109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 150523110 . G . PASS END=150523110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 150523111 . C . PASS END=150523111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 150523112 . A . PASS END=150523112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 150523113 . G . PASS END=150523144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 150523145 . T . PASS END=150523145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,660:0,49,255:19,0 chr1 150523146 . C . PASS END=150523164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 150523165 . C . PASS END=150523165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 150523166 . C . PASS END=150523188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 150523189 . C . PASS END=150523189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:19,0 chr1 150523190 . T . PASS END=150523234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 150523235 . A . PASS END=150523242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150523243 . C . PASS END=150523246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150523247 . A . PASS END=150523257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 150523258 . C . PASS END=150523262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150523263 . G . PASS END=150523263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 150523264 . C . PASS END=150523264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 150523265 . G . PASS END=150523265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 150523266 . C . PASS END=150523267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 150523268 . C . PASS END=150523268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 150523269 . G . PASS END=150523274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150523275 . G . PASS END=150523282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 150523283 . A . PASS END=150523283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 150523284 . C . PASS END=150523313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,329:0,33,255:12,0 chr1 150523314 . A . PASS END=150523330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,327:0,27,255:9,0 chr1 150523331 . G . PASS END=150523332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 150523333 . G . PASS END=150523333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 150523334 . G . PASS END=150523359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 150523360 . T . PASS END=150523360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150523361 . T . PASS END=150523361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 150523362 . C . PASS END=150523366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 150523367 . C . PASS END=150523367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 150523368 . C . PASS END=150523437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,553:0,44,255:19,0 chr1 150523438 . C . PASS END=150523443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150523444 . G . PASS END=150523444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:20,0 chr1 150523445 . C . PASS END=150523450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150523451 . A . PASS END=150523451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 150523452 . G . PASS END=150523453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150523454 . T . PASS END=150523454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:22,0 chr1 150523455 . C . PASS END=150523460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150523461 . G . PASS END=150523461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,756:0,36,255:23,0 chr1 150523462 . A . PASS END=150523463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 150523464 . A . PASS END=150523464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:23,0 chr1 150523465 . C . PASS END=150523467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 150523468 . A . LowGQ END=150523469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:0:25:0,0,768:0,0,255:23,2 chr1 150523470 . T . PASS END=150523470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr1 150523471 . T . PASS END=150523489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,923:0,75,255:26,0 chr1 150523490 . G . PASS END=150523490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150523491 . A . PASS END=150523491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 150523492 . A . PASS END=150523492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,988:0,51,255:28,0 chr1 150523493 . C . PASS END=150523495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 150523496 . A . PASS END=150523496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,915:0,57,255:26,0 chr1 150523497 . G . PASS END=150523497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 150523498 . A . PASS END=150523498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:26,0 chr1 150523499 . G . PASS END=150523499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150523500 . T . PASS END=150523500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,905:0,56,255:26,0 chr1 150523501 . G . PASS END=150523504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150523505 . T . PASS END=150523530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,939:0,64,255:26,0 chr1 150523531 . A . PASS END=150523531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 150523532 . A . PASS END=150523536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,74,255:22,0 chr1 150523753 . A . PASS END=150523767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,122,255:40,0 chr1 150524681 . A . PASS END=150524730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 150524731 . T . PASS END=150524731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:16,0 chr1 150524732 . C . PASS END=150524734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:19:0,49,684:0,49,255:19,0 chr1 150524735 . G . PASS END=150524735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,580:0,24,255:17,0 chr1 150524736 . C . PASS END=150524742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,582:0,40,255:19,0 chr1 150524743 . C . PASS END=150524743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,545:0,12,255:17,0 chr1 150524744 . T . PASS END=150524761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,621:0,43,255:18,0 chr1 150524762 . G . PASS END=150524762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 150524763 . C . PASS END=150524763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 150524764 . G . PASS END=150524764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:14,0 chr1 150524765 . A . PASS END=150524769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 150524770 . G . PASS END=150524770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,570:0,26,255:16,0 chr1 150524771 . A . PASS END=150524772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 150524773 . C . PASS END=150524773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:15,0 chr1 150524774 . T . PASS END=150524779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 150524780 . G . PASS END=150524780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 150524781 . G . PASS END=150524782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 150524783 . A . PASS END=150524783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,511:0,21,255:15,0 chr1 150524784 . G . PASS END=150524784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 150525019 . G . PASS END=150525019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 150525020 . C . PASS END=150525047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 150525048 . C . PASS END=150525048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 150525049 . C . PASS END=150525050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150525051 . T . PASS END=150525055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 150525056 . C . PASS END=150525056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 150525057 . A . PASS END=150525076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 150525373 . G . PASS END=150525373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:13,0 chr1 150525374 . G . PASS END=150525376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 150525377 . T . PASS END=150525397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 150525398 . A . PASS END=150525398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 150525399 . C . PASS END=150525408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 150525409 . G . PASS END=150525409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 150525410 . G . PASS END=150525426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 150525427 . A . PASS END=150525427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 150525428 . G . PASS END=150525441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 150525442 . T . PASS END=150525443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:10,0 chr1 150525444 . G . PASS END=150525453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,466:0,39,255:13,0 chr1 150525454 . G . PASS END=150525518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,488:0,41,255:19,0 chr1 150525519 . C . PASS END=150525540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:21,0 chr1 150525541 . G . PASS END=150525570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 150525571 . A . PASS END=150525571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:13,0 chr1 150525572 . G . PASS END=150525583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 150525584 . C . PASS END=150525584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 150525585 . C . PASS END=150525630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,599:0,41,255:19,0 chr1 150525631 . C . PASS END=150525646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,721:0,60,255:22,0 chr1 150525647 . T . PASS END=150525667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,646:0,46,255:19,0 chr1 150525668 . C . PASS END=150525685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:22,0 chr1 150525686 . C . PASS END=150525687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 150525688 . C . PASS END=150525725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:23,0 chr1 150525726 . G . PASS END=150525726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 150525727 . G . PASS END=150525729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150525902 . G . PASS END=150525905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 150525906 . C . PASS END=150525906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150525907 . G . PASS END=150526006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:29:0,84,1163:0,86,255:37,0 chr1 150526007 . A . PASS END=150526024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 150526025 . C . PASS END=150526043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:25:0,63,945:0,75,255:25,0 chr1 150526044 . G C, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=2.769;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:6,7,0:7,6,0:48:85,0,50,465,417,882:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,4,9:5,8,6,7 chr1 150526045 . C . PASS END=150526067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 150526068 . G . PASS END=150526070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150526071 . G . PASS END=150526071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150526072 . A . PASS END=150526072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150526073 . G . PASS END=150526073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 150526074 . C . PASS END=150526081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 150526082 . C . PASS END=150526105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,601:0,43,255:19,0 chr1 150526106 . G . PASS END=150526106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 150526107 . C . PASS END=150526112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 150526113 . C . PASS END=150526122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 150526123 . T . PASS END=150526123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 150526124 . G . PASS END=150526126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150526127 . T . PASS END=150526128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 150526129 . T . PASS END=150526131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 150526132 . A . PASS END=150526138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 150526139 . A . PASS END=150526139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr1 150526140 . T . PASS END=150526145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 150526146 . C . PASS END=150526146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,337:0,22,255:11,0 chr1 150526147 . A . PASS END=150526147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,327:0,6,255:10,0 chr1 150526148 . A . PASS END=150526149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:12,0 chr1 150526150 . C . PASS END=150526150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 150526151 . A . PASS END=150526151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 150526152 . G . PASS END=150526152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 150526153 . A . PASS END=150526153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 150526154 . A . PASS END=150526154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,324:0,3,255:6,0 chr1 150526155 . C . PASS END=150526155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 150526156 . C . PASS END=150526158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 150526159 . T . PASS END=150526159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:9,0 chr1 150526160 . A . PASS END=150526160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 150526161 . A . PASS END=150526161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:9,0 chr1 150526162 . G . LowGQ END=150526162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,433:10,0,255:9,0 chr1 150526163 . C . PASS END=150526165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 150526166 . T . PASS END=150526166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,319:0,19,255:11,0 chr1 150526167 . G . PASS END=150526167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 150526168 . A . PASS END=150526170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 150526171 . C . PASS END=150526171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 150526172 . T . PASS END=150526172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,302:0,3,255:10,0 chr1 150526173 . G . PASS END=150526174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 150526175 . T . LowGQ END=150526175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,343:3,0,255:11,0 chr1 150526176 . C . PASS END=150526178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 150526179 . A . PASS END=150526179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 150526180 . C . PASS END=150526180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 150526181 . A . PASS END=150526181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,302:0,3,255:9,0 chr1 150526182 . G . PASS END=150526182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 150526183 . A . PASS END=150526183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,341:0,6,255:10,0 chr1 150526184 . G . PASS END=150526184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:10,0 chr1 150526185 . G . PASS END=150526185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 150526186 . T . PASS END=150526186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:9,0 chr1 150526187 . G . PASS END=150526188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 150526189 . C . LowGQ END=150526190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,316:0,0,255:10,0 chr1 150526191 . C . PASS END=150526191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:9,0 chr1 150526192 . C . PASS END=150526192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 150526193 . C . PASS END=150526195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:9,0 chr1 150526196 . A . LowGQ END=150526196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,225:14,0,239:8,0 chr1 150526197 . A . PASS END=150526198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:17:11:0,17,321:0,17,255:9,0 chr1 150526199 . C . PASS END=150526199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 150526200 . A . PASS END=150526201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 150526202 . G . PASS END=150526202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 150526203 . C . PASS END=150526203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 150526204 . C . PASS END=150526204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 150526205 . T . PASS END=150526208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 150526209 . C . PASS END=150526209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 150526210 . C . PASS END=150526210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 150526211 . C . PASS END=150526211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150526212 . C . PASS END=150526212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr1 150526213 . T . PASS END=150526213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150526214 . A . PASS END=150526214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,349:0,9,255:12,0 chr1 150526215 . C . PASS END=150526215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:13,0 chr1 150526216 . G . PASS END=150526218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150526219 . A . PASS END=150526219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,390:0,11,255:13,0 chr1 150526220 . T . PASS END=150526221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 150526222 . A . PASS END=150526222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,327:0,6,255:9,0 chr1 150526223 . C . PASS END=150526227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 150526228 . G . PASS END=150526228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr1 150526229 . A . PASS END=150526229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150526230 . G . PASS END=150526230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 150526231 . C . PASS END=150526240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,435:0,39,255:13,0 chr1 150526241 . T . PASS END=150526245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 150526246 . C . PASS END=150526246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:13,0 chr1 150526247 . A . PASS END=150526248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 150526249 . A . PASS END=150526249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 150526250 . G . PASS END=150526250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:13,0 chr1 150526251 . C . PASS END=150526252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 150526253 . C . PASS END=150526253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 150526254 . C . PASS END=150526268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,635:0,40,255:17,0 chr1 150526269 . T . PASS END=150526269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 150526270 . C . PASS END=150526271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 150526272 . T . PASS END=150526272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:17,0 chr1 150526273 . T . PASS END=150526283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,645:0,54,255:18,0 chr1 150526284 . G . PASS END=150526287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 150526288 . T . PASS END=150526288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 150526289 . C . PASS END=150526290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 150526291 . T . PASS END=150526291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:18,0 chr1 150526292 . C . PASS END=150526294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 150526295 . T . PASS END=150526311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr1 150526312 . G . PASS END=150526319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 150526320 . A . PASS END=150526326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 150526327 . A . PASS END=150526327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 150526328 . G . PASS END=150526346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 150526347 . G . PASS END=150526347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:17,0 chr1 150526348 . T . PASS END=150526349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,607:0,40,255:16,0 chr1 150526350 . G . PASS END=150526350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:14,0 chr1 150526351 . C . PASS END=150526359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:15,0 chr1 150526360 . G . PASS END=150526360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 150526361 . C . PASS END=150526364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 150526365 . G . PASS END=150526366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 150526367 . T . PASS END=150526367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150526368 . C . PASS END=150526368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 150526369 . C . PASS END=150526370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150526371 . T . PASS END=150526371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 150526372 . T . PASS END=150526372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150526373 . T . PASS END=150526373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 150526374 . C . PASS END=150526375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150526376 . T . PASS END=150526376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150526377 . T . PASS END=150526377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:12,0 chr1 150526378 . C . PASS END=150526382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 150526383 . C . PASS END=150526383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:11,0 chr1 150526384 . C . PASS END=150526386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 150526387 . G . PASS END=150526387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 150526388 . G . PASS END=150526401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 150526402 . A . PASS END=150526403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,480:0,26,255:10,0 chr1 150526404 . G . PASS END=150526405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 150526406 . C T, 50.00 PASS DP=15;MQ=242.05;MQRankSum=2.416;ReadPosRankSum=-0.766;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,9,0:0.600,0.000:15:3,4,0:3,5,0:48:85,0,49,322,215,536:255,0,179:6,0:5.0000e+01,7.2740e-05,5.1689e+01,3.2183e+02,2.4937e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,4,5:5,1,5,4 chr1 150526407 . C . PASS END=150526407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 150526408 . A . PASS END=150526408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:10,0 chr1 150526409 . A . PASS END=150526411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:10,0 chr1 150526412 . G . PASS END=150526412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:9,0 chr1 150526413 . C . PASS END=150526421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 150526422 . A . PASS END=150526422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 150526423 . C . PASS END=150526426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 150526427 . G . PASS END=150526427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 150526428 . G . PASS END=150526430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,557:0,32,255:13,0 chr1 150526431 . A . PASS END=150526432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 150526433 . T . PASS END=150526433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 150526434 . C . PASS END=150526441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr1 150526442 . G . PASS END=150526442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr1 150526443 . C . PASS END=150526443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 150526444 . C . PASS END=150526452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr1 150526453 . A . PASS END=150526454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 150526455 . C . PASS END=150526490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 150526491 . C . PASS END=150526491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 150526492 . T . PASS END=150526498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 150526499 . C . PASS END=150526499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 150526500 . G . PASS END=150526543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,590:0,40,255:19,0 chr1 150526544 . C . PASS END=150526544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:13,0 chr1 150526545 . C . PASS END=150526545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 150526546 . C . PASS END=150526546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 150526547 . T . PASS END=150526553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 150526554 . A . PASS END=150526554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr1 150526555 . G . PASS END=150526555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 150526556 . A . PASS END=150526556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 150526557 . T . PASS END=150526559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 150526560 . T . PASS END=150526561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:12,0 chr1 150526562 . T . PASS END=150526566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 150526567 . A . LowGQ END=150526567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,449:2,0,255:10,0 chr1 150526568 . G . PASS END=150526570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 150526571 . T . PASS END=150526571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 150526572 . G . PASS END=150526573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 150526574 . A . PASS END=150526575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 150526576 . A . PASS END=150526577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 150526578 . C . PASS END=150526580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:10,0 chr1 150526581 . A . LowGQ END=150526581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,308:11,0,255:7,0 chr1 150526582 . G . PASS END=150526586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 150526587 . T . PASS END=150526587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 150526588 . G . PASS END=150526592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 150526593 . C . PASS END=150526593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 150526594 . A . PASS END=150526598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 150526613 . G . PASS END=150526613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 150526841 . C . PASS END=150526841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 150526842 . C . PASS END=150526846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 150526847 . C . PASS END=150526847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 150526848 . C . PASS END=150526854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 150526855 . G . PASS END=150526863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150526864 . C . PASS END=150526877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 150526878 . A . PASS END=150526878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 150526879 . G . PASS END=150526884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 150526885 . A . PASS END=150526885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 150526886 . G . PASS END=150526906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:23,0 chr1 150526907 . A . PASS END=150526907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 150526908 . T . PASS END=150526911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 150526912 . C . PASS END=150526913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150526914 . A . PASS END=150526923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 150526924 . G . PASS END=150526924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 150526925 . T . PASS END=150526930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr1 150526931 . C . PASS END=150526931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 150526932 . C . PASS END=150526943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:22,0 chr1 150527033 . G . PASS END=150527033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 150527042 . C . PASS END=150527074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,627:0,40,255:19,0 chr1 150527075 . T . PASS END=150527075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150527076 . T . PASS END=150527079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,62,255:19,0 chr1 150527080 . C . PASS END=150527086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150527087 . C . PASS END=150527103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 150527104 . A . PASS END=150527104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:13,0 chr1 150527105 . C . PASS END=150527105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 150527106 . A . PASS END=150527110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:17:0,36,540:0,37,255:13,0 chr1 150527905 . T . PASS END=150528041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:33:0,86,1210:0,86,255:40,0 chr1 150528632 . C . PASS END=150528632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150528638 . A . PASS END=150528642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1217:0,93,255:32,0 chr1 150528643 . C . PASS END=150528643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:30,0 chr1 150528644 . G . PASS END=150528669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1327:0,95,255:39,0 chr1 150528670 . C . PASS END=150528670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 150528671 . A . PASS END=150528772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1260:0,87,255:40,0 chr1 150528773 . A . PASS END=150528773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:27,0 chr1 150528774 . T . PASS END=150528776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 150528777 . T . PASS END=150528777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1115:0,55,255:26,0 chr1 150528778 . G . PASS END=150528782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 150528783 . T . PASS END=150528783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1170:0,63,255:30,0 chr1 150528784 . T . PASS END=150528815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr1 150528816 . A . PASS END=150528838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,833:0,72,255:26,0 chr1 150528839 . C . PASS END=150528839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 150528840 . T . PASS END=150528842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150529092 . C . PASS END=150529092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 150529097 . C . PASS END=150529116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 150529117 . C . PASS END=150529118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150529119 . G . PASS END=150529128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,620:0,45,255:16,0 chr1 150529129 . A . PASS END=150529129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:16,0 chr1 150529130 . A . PASS END=150529134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:18,0 chr1 150529135 . A . PASS END=150529135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 150529136 . A . PASS END=150529150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,666:0,54,255:18,0 chr1 150529151 . C . PASS END=150529153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 150529154 . C . PASS END=150529154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 150529155 . T . PASS END=150529166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:25,0 chr1 150529167 . G . PASS END=150529169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:25,0 chr1 150529170 . C . PASS END=150529187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 150529188 . A . PASS END=150529190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 150529191 . T . PASS END=150529191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 150529192 . A . PASS END=150529196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150529197 . T . PASS END=150529198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150529199 . C . PASS END=150529199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150529200 . T . PASS END=150529217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 150529218 . A . PASS END=150529218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,649:0,47,255:24,0 chr1 150529219 . G . PASS END=150529222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150529223 . A . PASS END=150529226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150529227 . T . PASS END=150529230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150529231 . T . PASS END=150529233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150529234 . G . PASS END=150529234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 150529235 . C . PASS END=150529249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 150529250 . C . PASS END=150529250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150529251 . C . PASS END=150529265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr1 150529266 . C . PASS END=150529266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 150529267 . T . PASS END=150529267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150529268 . A . PASS END=150529269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150529397 . A . PASS END=150529397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150529415 . A . PASS END=150529417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 150529418 . A . PASS END=150529429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:22,0 chr1 150529430 . G . PASS END=150529430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 150529431 . A . PASS END=150529443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 150529444 . T . PASS END=150529444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,640:0,49,255:20,0 chr1 150529445 . T . PASS END=150529447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 150529448 . T . PASS END=150529448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 150529449 . A . PASS END=150529450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 150529451 . C . PASS END=150529451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:20,0 chr1 150529452 . A . PASS END=150529452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150529453 . G . PASS END=150529453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 150529454 . T . PASS END=150529454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 150529455 . A . PASS END=150529455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,703:0,52,255:20,0 chr1 150529456 . T . PASS END=150529459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 150529460 . A . PASS END=150529460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:20,0 chr1 150529461 . T . PASS END=150529463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 150529464 . C . PASS END=150529465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr1 150529466 . T . PASS END=150529469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 150529470 . C . PASS END=150529470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 150529471 . T . PASS END=150529472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 150529473 . C . PASS END=150529473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 150529474 . T . PASS END=150529474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 150529475 . C . PASS END=150529475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 150529476 . C . PASS END=150529479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr1 150529480 . C . PASS END=150529480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 150529481 . C . PASS END=150529481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150529482 . T . PASS END=150529482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 150529483 . T . PASS END=150529483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150529484 . G . PASS END=150529485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150529486 . G . PASS END=150529486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:18,0 chr1 150529487 . A . PASS END=150529487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150529488 . A . PASS END=150529488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 150529489 . C . PASS END=150529489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150529490 . C . PASS END=150529499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,645:0,43,255:19,0 chr1 150529500 . A . PASS END=150529500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,578:0,21,255:17,0 chr1 150529501 . G . PASS END=150529514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,601:0,40,255:19,0 chr1 150529515 . A . PASS END=150529516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:16,0 chr1 150529517 . C . PASS END=150529519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,590:0,40,255:18,0 chr1 150529520 . C . PASS END=150529520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:16,0 chr1 150529521 . A . PASS END=150529524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:18,0 chr1 150529525 . G . PASS END=150529525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 150529526 . G . PASS END=150529526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 150529615 . C . PASS END=150529615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 150529626 . A . PASS END=150529629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 150529630 . T . PASS END=150529630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 150529631 . C . PASS END=150529643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 150529644 . C . PASS END=150529658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,233:0,18,233:6,0 chr1 150529659 . C . PASS END=150529697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 150529698 . A . PASS END=150529715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,186:5,0 chr1 150529716 . T . PASS END=150529730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 150529731 . A . PASS END=150529751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:6,0 chr1 150529752 . C . PASS END=150529773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 150529774 . A . PASS END=150529774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 150529775 . G . PASS END=150529798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 150529799 . T . PASS END=150529811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 150529970 . G . PASS END=150530001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 150530002 . C . PASS END=150530002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 150530003 . G . PASS END=150530017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 150530018 . A . PASS END=150530018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr1 150530019 . A . PASS END=150530027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 150530028 . A . PASS END=150530059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 150530060 . C . LowGQ END=150530060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:4,0,255:7,0 chr1 150530061 . C . PASS END=150530061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 150530062 . T . PASS END=150530079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 150530080 . G . PASS END=150530080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:6,0 chr1 150530081 . G . PASS END=150530081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 150530082 . C . PASS END=150530082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 150530083 . A . PASS END=150530083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 150530084 . C . PASS END=150530084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 150530085 . C . PASS END=150530085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 150530086 . C . PASS END=150530089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 150530090 . G . PASS END=150530090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 150530091 . C . PASS END=150530099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 150530411 . G . PASS END=150530411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150530414 . C . PASS END=150530414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 150530421 . C . PASS END=150530421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150530422 . T . PASS END=150530422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 150530423 . G . PASS END=150530427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 150530428 . G . PASS END=150530428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:24,0 chr1 150530429 . C . PASS END=150530441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 150530442 . A . PASS END=150530442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:22,0 chr1 150530443 . T . PASS END=150530443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 150530444 . C . PASS END=150530445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150530446 . T . PASS END=150530446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 150530447 . G . PASS END=150530447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 150530448 . C . PASS END=150530448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 150530449 . A . PASS END=150530460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 150530461 . G . PASS END=150530461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 150530462 . G . PASS END=150530462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 150530463 . C . PASS END=150530466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 150530467 . G . PASS END=150530501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,970:0,67,255:26,0 chr1 150530502 . A . PASS END=150530502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:25,0 chr1 150530503 . T . PASS END=150530504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 150530505 . T . PASS END=150530507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,917:0,10,255:26,2 chr1 150530508 . G . PASS END=150530541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,878:0,61,255:26,0 chr1 150530542 . G . PASS END=150530542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 150530543 . G . PASS END=150530546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 150530547 . T . PASS END=150530548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:20,0 chr1 150530549 . T . PASS END=150530553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 150530554 . C . PASS END=150530555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150530556 . G . PASS END=150530556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 150530557 . C . PASS END=150530557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 150530558 . C . PASS END=150530565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 150530566 . A . PASS END=150530570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,709:0,49,255:19,0 chr1 150530571 . G . PASS END=150530574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 150530575 . T . PASS END=150530575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 150530576 . G . PASS END=150530576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150530577 . C . PASS END=150530577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 150530578 . C . PASS END=150530583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150530584 . C . PASS END=150530589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150530590 . T . PASS END=150530590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,623:0,29,255:18,0 chr1 150530591 . G . PASS END=150530592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 150530593 . G . PASS END=150530593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 150530594 . G . PASS END=150530599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,646:0,44,255:19,0 chr1 150530600 . G . PASS END=150530600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 150530601 . G . PASS END=150530613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,629:0,43,255:19,0 chr1 150530614 . C . PASS END=150530615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 150530616 . T . PASS END=150530617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150530618 . G . PASS END=150530625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 150530713 . C . PASS END=150530726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 150530727 . A . PASS END=150530727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 150530728 . A . PASS END=150530734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,824:0,72,255:24,0 chr1 150530735 . T . PASS END=150530735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 150530736 . T . PASS END=150530736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 150530737 . T . PASS END=150530737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 150530738 . C . PASS END=150530746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 150530747 . C . PASS END=150530757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,720:0,47,255:18,0 chr1 150530949 . T . PASS END=150530954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 150530955 . G . PASS END=150530970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:16,0 chr1 150530971 . G . PASS END=150530976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 150530977 . G . PASS END=150531007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr1 150531008 . T C, 103.73 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,700,57,700:255,57,0:0,0:1.0373e+02,5.3726e+01,1.8379e-05,4.5000e+02,8.8496e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,10:0,0,14,5 chr1 150531009 . G . PASS END=150531011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:19,0 chr1 150531012 . G . PASS END=150531018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150531019 . T . PASS END=150531023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 150531024 . G . PASS END=150531049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 150531050 . G A, 49.15 PASS DP=23;MQ=248.66;MQRankSum=4.000;ReadPosRankSum=-0.837;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,10,0:0.435,0.000:23:7,4,0:6,6,0:48:84,0,50,350,457,807:255,0,255:12,0:4.9146e+01,7.4552e-05,5.3000e+01,3.4966e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,5,5:7,6,3,7 chr1 150531051 . C . PASS END=150531052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 150531053 . G . PASS END=150531053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 150531054 . C . PASS END=150531055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150531056 . C . PASS END=150531056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 150531057 . C . PASS END=150531065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:24,0 chr1 150531066 . G . PASS END=150531066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 150531067 . A . PASS END=150531071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150531072 . T . PASS END=150531072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:21,0 chr1 150531073 . G . PASS END=150531082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 150531083 . G . PASS END=150531085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 150531086 . C . PASS END=150531086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 150531087 . T . PASS END=150531087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 150531088 . G . PASS END=150531126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:25,0 chr1 150531127 . T . PASS END=150531127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 150531128 . G . PASS END=150531129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 150531130 . G . PASS END=150531130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 150531131 . C . PASS END=150531132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 150531133 . C . PASS END=150531147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,884:0,72,255:24,0 chr1 150531148 . T . PASS END=150531148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 150531149 . A . PASS END=150531149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 150531150 . T . PASS END=150531150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:19,0 chr1 150531151 . C . PASS END=150531158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150531159 . C . PASS END=150531169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 150531170 . C T, 109.74 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,10,0:0,11,0:60:148,63,0,769,63,769:255,63,0:0,0:1.0974e+02,5.9738e+01,4.6595e-06,4.5000e+02,9.4508e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,11:0,0,5,16 chr1 150531171 . G . PASS END=150531200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:18,0 chr1 150531433 . C . PASS END=150531434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150531438 . T . PASS END=150531471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,604:0,48,255:19,0 chr1 150531472 . G . PASS END=150531473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 150531474 . T . PASS END=150531474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 150531475 . C . PASS END=150531477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 150531478 . T . PASS END=150531478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 150531479 . G . PASS END=150531488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 150531489 . G . PASS END=150531490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 150531491 . G . PASS END=150531491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 150531492 . A . PASS END=150531492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 150531493 . G . PASS END=150531497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 150531498 . G . PASS END=150531498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 150531499 . C . PASS END=150531502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 150531503 . C . PASS END=150531503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 150531504 . C . PASS END=150531533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 150531534 . G . PASS END=150531534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 150531535 . G . PASS END=150531549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,870:0,72,255:24,0 chr1 150531550 . G . PASS END=150531550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 150531551 . T . PASS END=150531556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 150531557 . A . PASS END=150531557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 150531558 . G . PASS END=150531563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150531564 . C . PASS END=150531566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 150531567 . C . PASS END=150531569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 150531570 . C . PASS END=150531571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 150531572 . T . PASS END=150531575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 150531576 . A . PASS END=150531577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,713:0,47,255:18,0 chr1 150531578 . G . PASS END=150531578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:17,0 chr1 150531579 . C . PASS END=150531599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,47,255:18,0 chr1 150531600 . T . PASS END=150531600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 150531601 . G . PASS END=150531606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 150531607 . G . PASS END=150531613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 150531614 . G . PASS END=150531620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:13:0,21,315:0,39,255:8,0 chr1 150531621 . T . PASS END=150531631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 150531632 . C . PASS END=150531636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 150531637 . G . PASS END=150531641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 150531763 . T . PASS END=150531765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 150531766 . T . PASS END=150531766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 150531767 . C . PASS END=150531779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:23,0 chr1 150531780 . C . PASS END=150531780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 150531781 . T . PASS END=150531791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 150531792 . G . PASS END=150531862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1245:0,87,255:40,0 chr1 150531863 . A . PASS END=150531863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:28,0 chr1 150531864 . C . PASS END=150531876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 150531877 . C . PASS END=150531877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 150531878 . C . PASS END=150531878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 150531879 . T . PASS END=150531895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,70,255:25,0 chr1 150531896 . A . PASS END=150531941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 150531942 . A . PASS END=150531942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 150532229 . C . PASS END=150532229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150532230 . G . PASS END=150532230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150532237 . T . PASS END=150532237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 150532238 . G . PASS END=150532375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:32:0,87,1083:0,89,255:40,0 chr1 150532376 . G . PASS END=150532376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:29,0 chr1 150532377 . C . PASS END=150532378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 150532379 . C . PASS END=150532381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 150532536 . A . PASS END=150532553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:19,0 chr1 150532554 . G . PASS END=150532557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:23,0 chr1 150532558 . T . PASS END=150532558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 150532559 . C . PASS END=150532559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 150532560 . C . PASS END=150532560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 150532561 . A . PASS END=150532571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,906:0,72,255:25,0 chr1 150532572 . T . PASS END=150532652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:36,0 chr1 150532653 . C . PASS END=150532672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:26:0,69,1035:0,78,255:26,0 chr1 150532948 . G . PASS END=150532948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 150532977 . G . PASS END=150532977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 150533004 . A . PASS END=150533004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 150533005 . G . PASS END=150533005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150533079 . C . PASS END=150533079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 150533111 . C . PASS END=150533111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150533127 . C . PASS END=150533127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 150533311 . C . PASS END=150533312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 150533342 . C . PASS END=150533342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 150533346 . C . PASS END=150533346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 150549840 . T . PASS END=150549960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:33:0,81,1215:0,99,255:40,0 chr1 150549961 . A . PASS END=150549965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:26,0 chr1 150549966 . T . PASS END=150549966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:22,0 chr1 150549967 . C . PASS END=150549967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr1 150550720 . C . PASS END=150550725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1296:0,105,255:37,0 chr1 150550726 . T . PASS END=150550726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:36,0 chr1 150550727 . C . PASS END=150550967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:93:37:0,93,1289:0,95,255:40,0 chr1 150551319 . C . PASS END=150551332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 150551333 . T . PASS END=150551343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr1 150551344 . C . PASS END=150551359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr1 150551360 . A . PASS END=150551360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 150551361 . C . PASS END=150551389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,629:0,48,255:19,0 chr1 150551390 . C . PASS END=150551390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:17,0 chr1 150551391 . T . PASS END=150551407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 150551408 . C . PASS END=150551410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr1 150551411 . A . PASS END=150551411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 150551412 . T . PASS END=150551416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:23,0 chr1 150551417 . T . PASS END=150551417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:21,0 chr1 150551418 . T . PASS END=150551425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr1 150551426 . T . PASS END=150551426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:20,0 chr1 150551427 . T . PASS END=150551446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 150551447 . C . PASS END=150551447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 150551448 . G . PASS END=150551449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 150551450 . A . PASS END=150551450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 150551451 . G . PASS END=150551455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 150551456 . C . PASS END=150551457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 150551458 . A . PASS END=150551463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 150551464 . A . PASS END=150551466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150551467 . C . PASS END=150551475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150551476 . C . PASS END=150551516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,527:0,42,255:19,0 chr1 150551517 . G . PASS END=150551525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 150551526 . G . PASS END=150551530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150551531 . G . PASS END=150551535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 150551536 . G . PASS END=150551537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150551538 . C . PASS END=150551539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150551540 . G . PASS END=150551547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 150551548 . G . PASS END=150551548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 150551549 . T . PASS END=150551558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 150551559 . A . PASS END=150551559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 150551560 . T . PASS END=150551582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,545:0,48,255:16,0 chr1 150551583 . G . PASS END=150551583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 150551584 . C . PASS END=150551590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,627:0,51,255:17,0 chr1 150551591 . G . PASS END=150551591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:15,0 chr1 150551592 . C . PASS END=150551635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,584:0,40,255:19,0 chr1 150551636 . T . PASS END=150551636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:16,0 chr1 150551637 . C . PASS END=150551664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,562:0,40,255:19,0 chr1 150551665 . C . PASS END=150551665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:16,0 chr1 150551666 . G . PASS END=150551668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 150551669 . G . PASS END=150551677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,65,255:21,0 chr1 150551678 . T . PASS END=150551678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 150551679 . C . PASS END=150551679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 150551680 . C . PASS END=150551692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,593:0,43,255:19,0 chr1 150551693 . G . PASS END=150551693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,537:0,27,255:17,0 chr1 150551694 . C . PASS END=150551710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,637:0,43,255:19,0 chr1 150551711 . A . PASS END=150551713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,735:0,60,255:20,0 chr1 150551714 . A . PASS END=150551721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:52:21:0,52,784:0,52,255:19,0 chr1 150551722 . C . PASS END=150551723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 150551724 . T . PASS END=150551724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,690:0,11,255:18,0 chr1 150551725 . C . PASS END=150551728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150551729 . G . PASS END=150551729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150551730 . G . PASS END=150551734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150551735 . G . PASS END=150551737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 150551738 . G . PASS END=150551738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 150551739 . T . PASS END=150551772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 150551773 . C . PASS END=150551773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 150551774 . C . PASS END=150551777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 150551778 . C . PASS END=150551778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr1 150551779 . G . PASS END=150551786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:17,0 chr1 150551787 . G . PASS END=150551787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 150551788 . G . PASS END=150551812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,629:0,48,255:17,0 chr1 150551813 . G . PASS END=150551817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 150551818 . T . PASS END=150551848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,545:0,45,255:17,0 chr1 150551849 . G . PASS END=150551857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 150551858 . C . PASS END=150551860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 150551861 . C . PASS END=150551861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 150551862 . C . PASS END=150551869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150551870 . C . PASS END=150551871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 150551872 . C . PASS END=150551880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150551881 . G . PASS END=150551882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 150551883 . C . PASS END=150551884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 150551885 . T . PASS END=150551888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 150551889 . T . PASS END=150551890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:9,0 chr1 150551891 . T . PASS END=150551895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 150551896 . A . PASS END=150551897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 150551898 . C . PASS END=150551898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 150551899 . C . PASS END=150551912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 150551913 . C . PASS END=150551913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 150551914 . C . PASS END=150551924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 150551925 . C . LowGQ END=150551925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:4,0,255:7,0 chr1 150551926 . G . PASS END=150551937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 150551938 . G . PASS END=150551938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 150551939 . G . PASS END=150551949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,294:0,24,255:8,0 chr1 150551950 . G . PASS END=150551950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 150551951 . G . PASS END=150551953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 150551954 . C . PASS END=150551957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 150551958 . C . PASS END=150551960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 150551961 . A . PASS END=150551961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:7,0 chr1 150551962 . G . PASS END=150551963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 150551964 . A . PASS END=150551964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:6,0 chr1 150551965 . G . PASS END=150551965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 150551966 . A . PASS END=150551972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:13:8:0,13,225:0,13,255:6,0 chr1 150551973 . G . PASS END=150551973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:4,0 chr1 150551974 . T . PASS END=150551981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,219:5,0 chr1 150551982 . C . PASS END=150551982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr1 150551983 . C . PASS END=150552006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,127:6,0 chr1 150595320 . T . PASS END=150595321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,5:66:99:66:0,112,2115:0,112,255:40,0 chr1 150595322 . A . PASS END=150595322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,5:66:79:66:0,79,2101:0,79,255:40,0 chr1 150595323 . T . PASS END=150595335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:81:63:0,81,1800:0,81,255:40,0 chr1 150598114 . T . PASS END=150598114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 150598115 . T . PASS END=150598115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 150598116 . A . PASS END=150598120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:29,0 chr1 150598121 . G . PASS END=150598121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 150598122 . C . PASS END=150598126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:30,0 chr1 150598127 . T . PASS END=150598127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 150598128 . T . PASS END=150598129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr1 150598130 . C . PASS END=150598130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 150598131 . T . PASS END=150598133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 150598134 . T . PASS END=150598134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:30,0 chr1 150598135 . G . PASS END=150598284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:80:32:0,80,1095:0,80,255:40,0 chr1 150598955 . C . PASS END=150599002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,153,255:40,0 chr1 150599808 . T . PASS END=150599816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 150599817 . A . PASS END=150599817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 150599818 . A . PASS END=150599819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 150599820 . T . PASS END=150599820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 150599821 . T . PASS END=150599909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1135:0,81,255:37,0 chr1 150599910 . C . PASS END=150599910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 150599911 . A . PASS END=150599914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 150599915 . A . PASS END=150599926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,90,255:26,0 chr1 150599927 . A . PASS END=150599927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1085:0,57,255:24,0 chr1 150599928 . G . PASS END=150599933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,992:0,68,255:24,0 chr1 150599934 . G . PASS END=150599943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:19,0 chr1 150599944 . C . PASS END=150599952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:21,0 chr1 150599953 . A . PASS END=150599978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,765:0,50,255:19,0 chr1 150599979 . T . PASS END=150599987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:22,0 chr1 150599988 . T . PASS END=150599988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 150599989 . T . PASS END=150599994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 150599995 . A . PASS END=150599995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 150599996 . G . PASS END=150600007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 150600008 . T . PASS END=150600008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 150600009 . G . PASS END=150600010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 150600011 . C . PASS END=150600011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 150600012 . C . PASS END=150600041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 150600042 . C . PASS END=150600068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 150601537 . C . PASS END=150601581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,106,1211:0,106,255:40,0 chr1 150601890 . C . PASS END=150601946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,104,1449:0,104,255:40,0 chr1 150620797 . T . PASS END=150620803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 150620804 . T . PASS END=150620805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 150620806 . A . PASS END=150620812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 150620813 . G . PASS END=150620813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 150620814 . C . PASS END=150620819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr1 150620820 . G . PASS END=150620830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1016:0,80,255:32,0 chr1 150620831 . A . PASS END=150620831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 150620832 . T . PASS END=150621202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:80:32:0,80,1144:0,80,255:40,0 chr1 150621203 . T . PASS END=150621203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr1 150621204 . T . PASS END=150621210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1162:0,96,255:32,0 chr1 150621211 . G . PASS END=150621211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,969:0,79,255:28,0 chr1 150621212 . T . PASS END=150621214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,95,255:29,0 chr1 150621215 . C . PASS END=150621215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:27,0 chr1 150621216 . A . PASS END=150621221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 150621222 . C . PASS END=150621224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 150634290 . C . PASS END=150634404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,127,255:40,0 chr1 150636108 . C . PASS END=150636227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1188:0,85,255:40,0 chr1 150636228 . A . PASS END=150636239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:28:0,63,945:0,77,255:26,0 chr1 150667132 . C . PASS END=150667137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:25,0 chr1 150667138 . A . PASS END=150667138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:23,0 chr1 150667139 . T . PASS END=150667144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 150667145 . A . PASS END=150667146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 150667147 . T . PASS END=150667152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 150667153 . A . PASS END=150667326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:30:0,81,1133:0,83,255:40,0 chr1 150668206 . T . PASS END=150668235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:89:0,120,1800:0,204,255:40,0 chr1 150671130 . T . PASS END=150671198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,162,255:40,0 chr1 150671199 . G . PASS END=150671210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:93:68:0,93,1395:0,197,255:40,0 chr1 150671430 . T . PASS END=150671441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,206,255:40,0 chr1 150672588 . T . PASS END=150672659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,166,255:40,0 chr1 150675786 . C . PASS END=150675869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:91:0,120,1800:0,249,255:40,0 chr1 150676594 . C . PASS END=150676615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,153,255:40,0 chr1 150676616 . T . PASS END=150676616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,9:80:68:80:0,68,2192:0,68,255:40,0 chr1 150676617 . C . PASS END=150676628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:78:0,120,1800:0,199,255:40,0 chr1 150676629 . T . PASS END=150676631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,215,255:40,0 chr1 150676632 . A . PASS END=150676632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,9:83:54:83:0,54,2134:0,54,255:40,0 chr1 150676633 . C . PASS END=150676670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,3:82:99:81:0,120,1800:0,168,255:40,0 chr1 150676753 . C . PASS END=150676819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,191,255:40,0 chr1 150679029 . A . PASS END=150679032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:43:0,114,1710:0,129,255:40,0 chr1 150679033 . G A, 200.48 PASS DP=51;MQ=244.30;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,23,0:0,28,0:150:238,153,0,338,338,338:255,156,0:0,0:2.0048e+02,1.5048e+02,0.0000e+00,3.3525e+02,3.7002e+02,3.3826e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,36,15:0,0,26,25 chr1 150679034 . T . PASS END=150679070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:51:0,110,1800:0,110,255:40,0 chr1 150679071 . C . PASS END=150679285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:42:0,110,1499:0,110,255:40,0 chr1 150680732 . C . PASS END=150680883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:35:0,93,1357:0,95,255:40,0 chr1 150681370 . C . PASS END=150681437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:93:0,120,1800:0,251,255:40,0 chr1 150684021 . C . PASS END=150684047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:83:0,120,1800:0,217,255:40,0 chr1 150684309 . A . PASS END=150684329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:92:0,120,1800:0,255,255:40,0 chr1 150686561 . A . PASS END=150686597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:84:0,120,1800:0,236,255:40,0 chr1 150687091 . C . PASS END=150687154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:45:0,102,1604:0,102,255:40,0 chr1 150689614 . C . PASS END=150689616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,967:0,65,255:26,0 chr1 150689617 . C . PASS END=150689621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 150689622 . T . PASS END=150689623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1172:0,60,255:32,0 chr1 150689624 . T . PASS END=150689738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1180:0,83,255:40,0 chr1 150689739 . T . PASS END=150689739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:34,0 chr1 150689740 . T . PASS END=150689744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1272:0,92,255:34,0 chr1 150689745 . A . PASS END=150689758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:26:0,69,1035:0,77,255:26,0 chr1 150691949 . C . PASS END=150691981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,128,255:40,0 chr1 150705522 . C . PASS END=150705621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,108,1393:0,109,255:40,0 chr1 150720253 . C . PASS END=150720355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,149,255:40,0 chr1 150722482 . C . PASS END=150722483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 150722484 . C . PASS END=150722504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,831:0,64,255:26,0 chr1 150722505 . G . PASS END=150722507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 150722508 . T . PASS END=150722508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 150722509 . G . PASS END=150722511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 150722512 . G . PASS END=150722514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150722515 . C . PASS END=150722610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1059:0,92,255:38,0 chr1 150722611 . C . PASS END=150722612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 150722613 . G . PASS END=150722615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 150722616 . C . PASS END=150722647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,817:0,62,255:26,0 chr1 150724257 . C . PASS END=150724257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 150724258 . A . PASS END=150724259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 150724260 . G . PASS END=150724260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 150724261 . G . PASS END=150724262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 150724263 . T . PASS END=150724263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:44:31:0,44,1028:0,44,255:27,0 chr1 150724264 . T . PASS END=150724397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1161:0,80,255:40,0 chr1 150724398 . G . PASS END=150724398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:31,0 chr1 150724399 . A . PASS END=150724424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:34,0 chr1 150724425 . C . PASS END=150724441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,87,255:26,0 chr1 150724442 . G . PASS END=150724470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 150724471 . G . PASS END=150724471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 150724472 . C . PASS END=150724479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150724480 . G . PASS END=150724482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150724483 . C . PASS END=150724484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 150727477 . T . PASS END=150727479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 150727480 . A . PASS END=150727480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 150727481 . T . PASS END=150727481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 150727482 . A . PASS END=150727482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 150727483 . T . PASS END=150727483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 150727484 . T . PASS END=150727484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:28,0 chr1 150727485 . T . PASS END=150727501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1080:0,87,255:40,0 chr1 150727502 . C . PASS END=150727538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,101,1535:0,101,255:40,0 chr1 150727539 . G A, 219.26 PASS DP=59;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,26,0:0,32,0:169:257,172,0,2086,172,2086:255,177,0:0,0:2.1926e+02,1.6926e+02,0.0000e+00,4.5000e+02,2.0403e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,29:0,0,29,29 chr1 150727540 . A . PASS END=150727576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,142,255:40,0 chr1 150727577 . T . PASS END=150727626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:39:0,93,1395:0,96,255:40,0 chr1 150730334 . C . PASS END=150730448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:34:0,86,1233:0,86,255:40,0 chr1 150730449 . T . PASS END=150730449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1126:0,64,255:31,0 chr1 150730450 . C . PASS END=150730456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:34,0 chr1 150737114 . C . PASS END=150737141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:89:30:0,89,880:0,89,255:31,0 chr1 150737142 . T . PASS END=150737142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 150737143 . T . PASS END=150737152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 150737153 . A . PASS END=150737153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr1 150737154 . T . PASS END=150737207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1169:0,80,255:34,0 chr1 150737208 . C . PASS END=150737239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,770:0,66,255:23,0 chr1 150768808 . T . PASS END=150768808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 150768814 . G . PASS END=150768814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 150768933 . G . PASS END=150768933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 150769275 . T . PASS END=150769372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1260:0,87,255:40,0 chr1 150769373 . A . PASS END=150769375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:23,0 chr1 150771638 . C . PASS END=150771638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 150771644 . C . PASS END=150771665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,145,255:40,0 chr1 150771666 . T . PASS END=150771702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,179,255:40,0 chr1 150771703 . T C, 254.67 PASS DP=69;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,43,0:0,26,0:205:292,208,0,2667,208,2667:255,208,0:0,0:2.5467e+02,2.0467e+02,0.0000e+00,4.5000e+02,2.3944e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,39:0,0,28,41 chr1 150771704 . G . PASS END=150771740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,100,1800:0,100,255:40,0 chr1 150771741 . A . PASS END=150771749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:43:0,105,1575:0,116,255:40,0 chr1 150772019 . C . PASS END=150772022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,89,255:29,0 chr1 150772023 . T . PASS END=150772023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:27,0 chr1 150772024 . G . PASS END=150772029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150772030 . A . PASS END=150772031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 150772032 . A . PASS END=150772036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 150772037 . A . PASS END=150772037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 150772038 . A . PASS END=150772049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:31,0 chr1 150772050 . T . PASS END=150772050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr1 150772051 . T . PASS END=150772065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 150772066 . A . PASS END=150772066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 150772067 . G . PASS END=150772154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1128:0,83,255:40,0 chr1 150772155 . T . PASS END=150772156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150772157 . C . PASS END=150772171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 150772172 . A . PASS END=150772185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,885:0,64,255:25,0 chr1 150776495 . A . PASS END=150776502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:24,0 chr1 150776503 . C . PASS END=150776504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:24,0 chr1 150776505 . C . PASS END=150776517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,834:0,75,255:25,0 chr1 150776518 . A . PASS END=150776518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 150776519 . T . PASS END=150776519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:25,0 chr1 150776520 . C . PASS END=150776525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 150776526 . A . PASS END=150776526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 150776527 . G . PASS END=150776693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1127:0,80,255:40,0 chr1 150776694 . C . PASS END=150776701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:32:0,69,1035:0,80,255:26,0 chr1 150776702 . G . PASS END=150776702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:23,0 chr1 150776703 . A . PASS END=150776716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,921:0,62,255:24,0 chr1 150778334 . T . PASS END=150778334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 150778337 . C . PASS END=150778340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 150778341 . T . PASS END=150778343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 150778344 . T . PASS END=150778350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:26,0 chr1 150778351 . G . PASS END=150778492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1139:0,80,255:40,0 chr1 150778499 . C . PASS END=150778499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 150778577 . C . PASS END=150778702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:51:0,120,1800:0,140,255:40,0 chr1 150779161 . C . PASS END=150779282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:31:0,90,1142:0,93,255:40,0 chr1 150779291 . G . PASS END=150779291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 150779725 . A . PASS END=150779729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:31,0 chr1 150779730 . G . PASS END=150779730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr1 150779731 . G . PASS END=150779734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1209:0,89,255:34,0 chr1 150779735 . G . PASS END=150779735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr1 150779736 . A . PASS END=150779754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1242:0,89,255:36,0 chr1 150779755 . C T, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,20,0:0,15,0:102:190,105,0,1357,105,1357:255,108,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,15:0,0,21,14 chr1 150779756 . T . PASS END=150779792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:40,0 chr1 150779793 . C . PASS END=150779844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,105,1435:0,105,255:40,0 chr1 150779845 . G . PASS END=150779854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:40:0,90,1485:0,90,255:37,0 chr1 150779855 . T . PASS END=150779855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:34,0 chr1 150779856 . C . PASS END=150779868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1282:0,94,255:35,0 chr1 150779869 . A . PASS END=150779869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1174:0,56,255:22,0 chr1 150779870 . C . PASS END=150779877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:63:34:0,63,945:0,75,255:23,0 chr1 150779878 . A . LowGQ END=150779878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:33:0,0,959:6,0,255:16,0 chr1 150779879 . T . PASS END=150779879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:20,0 chr1 150779880 . C . PASS END=150779880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,898:0,15,255:18,0 chr1 150779881 . T . PASS END=150779881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 150779882 . C . PASS END=150779882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,790:0,28,255:19,0 chr1 150779883 . C . PASS END=150779883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,851:0,9,255:21,0 chr1 150779884 . T . PASS END=150779884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,755:0,17,255:21,0 chr1 150779885 . C . PASS END=150779897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 150779898 . C . PASS END=150779898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 150779899 . A . PASS END=150779900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 150780760 . A . PASS END=150780760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150780771 . C . PASS END=150780771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150780779 . C . PASS END=150780779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 150780873 . G . PASS END=150780873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 150784497 . C . PASS END=150784582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,147,255:40,0 chr1 150784583 . T . PASS END=150784586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 150785648 . C . PASS END=150785774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1058:0,90,255:40,0 chr1 150785775 . C . PASS END=150785775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:29,0 chr1 150785776 . G . PASS END=150785779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 150785780 . C . PASS END=150785780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 150785781 . T . PASS END=150785785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:31,0 chr1 150785786 . T . PASS END=150785803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,74,255:26,0 chr1 150785804 . A . PASS END=150785804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 150785805 . G . PASS END=150785810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 150785811 . G . PASS END=150785814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:21:0,53,798:0,53,255:19,0 chr1 150786553 . C . PASS END=150786553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 150786554 . A . PASS END=150786555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 150786556 . A . PASS END=150786569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:17,0 chr1 150786570 . T . PASS END=150786570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 150786571 . T . PASS END=150786576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 150786577 . G . PASS END=150786585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr1 150786586 . A . PASS END=150786586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 150786587 . G . PASS END=150786588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 150786589 . C . PASS END=150786611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1055:0,84,255:36,0 chr1 150786612 . G . PASS END=150786612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr1 150786613 . G . PASS END=150786677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1087:0,80,255:39,0 chr1 150786678 . G . PASS END=150786715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,870:0,68,255:26,0 chr1 150788735 . C . PASS END=150788745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:19,0 chr1 150788746 . A . PASS END=150788753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:22,0 chr1 150788754 . C . PASS END=150788754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 150788755 . G . PASS END=150788763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,884:0,62,255:26,0 chr1 150788764 . G . PASS END=150788766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 150788767 . T . PASS END=150788777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,878:0,64,255:26,0 chr1 150788778 . G . PASS END=150788781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 150788782 . C . PASS END=150788793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,77,255:29,0 chr1 150788794 . G . PASS END=150788804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:32,0 chr1 150788805 . C . PASS END=150788805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 150788806 . G . PASS END=150788848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1149:0,82,255:34,0 chr1 150788849 . G . PASS END=150788854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:26,0 chr1 150788855 . G . PASS END=150788855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:23,0 chr1 150788856 . G . PASS END=150788874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr1 150788875 . C . PASS END=150788882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:19,0 chr1 150789264 . C . PASS END=150789277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,858:0,61,255:26,0 chr1 150789278 . C . PASS END=150789278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr1 150789279 . G . PASS END=150789285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,925:0,78,255:26,0 chr1 150789286 . G . PASS END=150789286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 150789287 . G . PASS END=150789296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:25,0 chr1 150789297 . A . PASS END=150789298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:26,0 chr1 150789299 . T . PASS END=150789299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150789300 . G . PASS END=150789303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 150789304 . T . PASS END=150789304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150789305 . G . PASS END=150789305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150789306 . C . PASS END=150789306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 150789307 . C . PASS END=150789314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 150789315 . A . PASS END=150789315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 150789316 . A . PASS END=150789317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 150789318 . A . PASS END=150789318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:26,0 chr1 150789319 . G . PASS END=150789319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 150789320 . C . PASS END=150789320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 150789321 . T . PASS END=150789325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 150789326 . G . PASS END=150789326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 150789327 . G . PASS END=150789333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:31,0 chr1 150789334 . G . PASS END=150789334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 150789335 . G . PASS END=150789350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1127:0,80,255:31,0 chr1 150789351 . A . PASS END=150789366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1021:0,74,255:28,0 chr1 150789558 . C . PASS END=150789678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,105,1575:0,125,255:40,1 chr1 150789837 . C . PASS END=150789909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,152,255:40,0 chr1 150790396 . C . PASS END=150790396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 150790397 . T . PASS END=150790446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1041:0,80,255:40,0 chr1 150790447 . C . PASS END=150790447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:39,0 chr1 150790448 . C . PASS END=150790474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:40:0,87,1287:0,87,255:40,0 chr1 150790475 . A . PASS END=150790475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1327:0,73,255:31,0 chr1 150790476 . G . PASS END=150790481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:34:0,91,1274:0,91,255:32,0 chr1 150790482 . A . PASS END=150790482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1100:0,41,255:29,0 chr1 150790483 . G . PASS END=150790483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:31,0 chr1 150790484 . G . PASS END=150790485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:32,0 chr1 150790486 . C . PASS END=150790486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1141:0,47,255:30,0 chr1 150790487 . G . PASS END=150790495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:32,0 chr1 150790496 . G . PASS END=150790499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:30:0,78,1170:0,79,255:26,0 chr1 150790500 . A . PASS END=150790500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:23,0 chr1 150790501 . G . PASS END=150790506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,972:0,71,255:26,0 chr1 150795670 . T . PASS END=150795800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:36:0,81,1214:0,83,255:40,0 chr1 150795801 . T . PASS END=150795802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 150795803 . G . PASS END=150795810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 150795811 . A . PASS END=150795821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 150799019 . C . PASS END=150799076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,120,1800:0,152,255:40,0 chr1 150799077 . T . PASS END=150799093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:46:0,102,1530:0,118,255:40,0 chr1 150801569 . C . PASS END=150801688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:36:0,84,1260:0,93,255:40,0 chr1 150801689 . G . PASS END=150801689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:27,0 chr1 150801690 . G . PASS END=150801692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:28,0 chr1 150801693 . G . PASS END=150801693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1107:0,44,255:26,0 chr1 150801694 . A . PASS END=150801694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,979:0,76,255:26,0 chr1 150801695 . A . PASS END=150801695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150801696 . C . PASS END=150801696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:22,0 chr1 150801697 . T . PASS END=150801698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 150801699 . G . PASS END=150801699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:22,0 chr1 150801700 . T . PASS END=150801703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:22,0 chr1 150802380 . C . PASS END=150802456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,113,1604:0,113,255:40,0 chr1 150804294 . C . PASS END=150804351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:32:0,83,1144:0,83,255:40,0 chr1 150804352 . C . PASS END=150804367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:46:0,81,1215:0,86,255:40,0 chr1 150804368 . C . PASS END=150804375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:66:45:0,66,990:0,83,255:24,0 chr1 150804376 . A . PASS END=150804379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:48:42:0,48,720:0,48,255:18,0 chr1 150804810 . C . PASS END=150804875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,105,1575:0,120,255:40,0 chr1 150807014 . C . PASS END=150807116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,123,255:40,0 chr1 150808756 . C . PASS END=150808761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 150808762 . G . PASS END=150808762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 150808763 . G . PASS END=150808767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 150808768 . T . PASS END=150808768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 150808769 . T . PASS END=150808851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1111:0,90,255:38,0 chr1 150808852 . A . PASS END=150808888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1260:0,81,255:38,0 chr1 150808889 . C G, 164.37 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,20,0:0,19,0:114:202,117,0,1498,117,1498:255,117,0:0,0:1.6437e+02,1.1437e+02,0.0000e+00,4.5000e+02,1.4914e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,20:0,0,20,19 chr1 150808890 . A . PASS END=150808907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1350:0,93,255:32,0 chr1 150808908 . G . PASS END=150808908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 150808909 . T . PASS END=150808916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 150808917 . G . PASS END=150808918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:29,0 chr1 150808919 . G . PASS END=150808926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 150808927 . A . PASS END=150808931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150808932 . A . PASS END=150808943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,71,255:25,0 chr1 150808944 . G . PASS END=150808962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:40:19:0,40,607:0,40,255:18,0 chr1 150808963 . T . PASS END=150808967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:38:17:0,38,585:0,38,255:13,0 chr1 150808968 . T . PASS END=150808969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 150811917 . C . PASS END=150811925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:19,0 chr1 150811926 . G . PASS END=150811929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 150811930 . A . PASS END=150811930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 150811931 . A . PASS END=150811936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,664:0,63,255:21,0 chr1 150811937 . G . PASS END=150811937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 150811938 . C . PASS END=150811940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 150811941 . A . PASS END=150811941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 150811942 . T . PASS END=150811958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,864:0,72,255:26,0 chr1 150811959 . T . PASS END=150811960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 150811961 . T . PASS END=150811961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 150811962 . G . PASS END=150811969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 150811970 . T . PASS END=150811970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 150811971 . T . PASS END=150811978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 150811979 . A . PASS END=150811980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1062:0,74,255:26,0 chr1 150811981 . G . PASS END=150811983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 150811984 . T . PASS END=150811985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1008:0,60,255:28,0 chr1 150811986 . C . PASS END=150811990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 150811991 . G . PASS END=150811991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 150811992 . A . PASS END=150811996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 150811997 . C . PASS END=150811997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 150811998 . T . PASS END=150811998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 150811999 . G . PASS END=150811999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:30,0 chr1 150812000 . C . PASS END=150812000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 150812001 . C . PASS END=150812014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1147:0,80,255:32,0 chr1 150812015 . T . PASS END=150812015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:30,0 chr1 150812016 . T . PASS END=150812114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:33:0,85,1166:0,85,255:40,0 chr1 150812115 . T . PASS END=150812115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr1 150812116 . T . PASS END=150812124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 150812125 . T . PASS END=150812125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 150812126 . T . PASS END=150812130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150814900 . C . PASS END=150814944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:96:39:0,96,1440:0,109,255:40,0 chr1 150818739 . C . PASS END=150818783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,200,255:40,0 chr1 150825238 . C . PASS END=150825316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:70:0,120,1800:0,184,255:40,0 chr1 150825724 . T . PASS END=150825726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 150825727 . A . PASS END=150825728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150825729 . C . PASS END=150825735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 150825736 . G . PASS END=150825736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:25,0 chr1 150825737 . A . PASS END=150825753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,911:0,67,255:26,0 chr1 150825754 . T . PASS END=150825754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:23,0 chr1 150829485 . C . PASS END=150829491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,1:128:99:126:0,120,1800:0,255,255:40,0 chr1 150830825 . C . PASS END=150830829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 150830830 . T . PASS END=150830830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 150830831 . C . PASS END=150830840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1070:0,84,255:30,0 chr1 150830841 . T . PASS END=150830841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 150830842 . A . PASS END=150830858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1153:0,80,255:39,0 chr1 150830859 . C . PASS END=150830859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:36,0 chr1 150830860 . T . PASS END=150830930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:31:0,82,1141:0,82,255:38,0 chr1 150830931 . T . PASS END=150830931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 150830932 . C . PASS END=150830936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150849019 . C . PASS END=150849026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 150849027 . G . PASS END=150849034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 150849035 . C . PASS END=150849040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:12,0 chr1 150849041 . C . PASS END=150849043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:21:18:0,21,315:0,54,255:8,0 chr1 150884791 . A . PASS END=150884792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1327:0,75,255:38,0 chr1 150884793 . G . PASS END=150884958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:40:0,81,1260:0,81,255:40,0 chr1 150899254 . A . PASS END=150899284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,142,255:40,0 chr1 150900180 . A . PASS END=150900184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 150900185 . A . PASS END=150900185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 150900186 . A . PASS END=150900197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:19,0 chr1 150900198 . C . PASS END=150900229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:25,0 chr1 150900230 . A . PASS END=150900230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 150900231 . C . PASS END=150900233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 150900234 . C . PASS END=150900253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1039:0,81,255:37,0 chr1 150900254 . A . PASS END=150900254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1170:0,64,255:34,0 chr1 150900255 . T . PASS END=150900432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1260:0,104,255:40,0 chr1 150900433 . C . PASS END=150900446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:27:0,60,900:0,68,255:26,0 chr1 150900447 . C . PASS END=150900450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,720:0,59,255:16,0 chr1 150902443 . G . PASS END=150902448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 150902449 . G . PASS END=150902452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150902453 . A . PASS END=150902453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 150902454 . A . PASS END=150902454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150902455 . T . PASS END=150902455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 150902456 . T . PASS END=150902527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1041:0,84,255:39,0 chr1 150902528 . T . PASS END=150902528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1244:0,72,255:36,0 chr1 150902529 . C . PASS END=150902574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1366:0,84,255:39,0 chr1 150902575 . T . PASS END=150902575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1050:0,36,255:30,0 chr1 150902576 . G . PASS END=150902590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1215:0,86,255:30,0 chr1 150902591 . T . PASS END=150902594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:77:28:0,77,1147:0,77,255:26,0 chr1 150912416 . G . PASS END=150912450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,122,255:40,0 chr1 150913805 . C . PASS END=150913805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 150913806 . T . PASS END=150913806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:24,0 chr1 150913807 . C . PASS END=150913809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 150913810 . T . PASS END=150913810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 150913811 . G . PASS END=150913815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 150913816 . T . PASS END=150913816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:27,0 chr1 150913817 . A . PASS END=150913817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:26,0 chr1 150913818 . T . PASS END=150913822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1033:0,73,255:26,0 chr1 150913823 . G . PASS END=150913827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 150913828 . A . PASS END=150913828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,886:0,15,255:26,0 chr1 150913829 . A . PASS END=150913836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 150913837 . A . PASS END=150913837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 150913838 . G . PASS END=150913844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1064:0,84,255:29,0 chr1 150913845 . A . PASS END=150913845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr1 150913846 . T . PASS END=150913855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 150913856 . T . PASS END=150913856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 150913857 . T . PASS END=150913889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1143:0,83,255:34,0 chr1 150913890 . A . PASS END=150913890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 150913891 . G . PASS END=150913899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:32,0 chr1 150913900 . T . PASS END=150913904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,79,255:26,0 chr1 150915039 . G . PASS END=150915164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:34:0,99,1452:0,101,255:40,0 chr1 150915326 . A . PASS END=150915326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,862:0,75,255:25,0 chr1 150915328 . G . PASS END=150915328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 150915329 . G . PASS END=150915354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 150915355 . T . PASS END=150915355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,872:0,42,255:25,0 chr1 150915356 . T . PASS END=150915371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,857:0,78,255:26,0 chr1 150915372 . A . PASS END=150915391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr1 150915392 . T . PASS END=150915408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,71,255:25,0 chr1 150915409 . A . PASS END=150915409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:22,0 chr1 150915410 . C . PASS END=150915433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,900:0,61,255:26,0 chr1 150915434 . G . PASS END=150915459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 150915460 . A . PASS END=150915460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 150915461 . A . PASS END=150915464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150915465 . G . PASS END=150915467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 150915468 . A . PASS END=150915471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 150915472 . A . PASS END=150915472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 150915473 . G . PASS END=150915479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 150915480 . C . PASS END=150915480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 150915481 . T . PASS END=150915511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,902:0,81,255:29,0 chr1 150915512 . C . PASS END=150915527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,939:0,65,255:26,0 chr1 150915528 . A . PASS END=150915528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr1 150915529 . G . PASS END=150915529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 150916396 . G . PASS END=150916469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,115,1734:0,115,255:40,0 chr1 150917394 . T . PASS END=150917394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 150917395 . G . PASS END=150917572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:27:0,81,978:0,81,255:40,0 chr1 150917573 . A . PASS END=150917573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:34,0 chr1 150917574 . T . PASS END=150917582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,91,255:35,0 chr1 150917583 . T . PASS END=150917596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:24:0,63,945:0,72,255:24,0 chr1 150917597 . T . PASS END=150917598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 150917599 . T . PASS END=150917613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 150917614 . A . PASS END=150917629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,56,255:19,0 chr1 150917630 . G . PASS END=150917633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,44,255:13,0 chr1 150917634 . C . PASS END=150917638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:16,0 chr1 150919362 . G . PASS END=150919367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:18,0 chr1 150919368 . A . PASS END=150919368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 150919369 . A . PASS END=150919371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,569:0,54,255:18,0 chr1 150919372 . G . PASS END=150919379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 150919380 . T . PASS END=150919380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 150919381 . G . PASS END=150919386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:25,0 chr1 150919387 . A . PASS END=150919395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:30,0 chr1 150919396 . C . PASS END=150919399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 150919400 . A . PASS END=150919401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1186:0,93,255:32,0 chr1 150919402 . G . PASS END=150919402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 150919403 . G . PASS END=150919407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:35,0 chr1 150919408 . A . PASS END=150919478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,84,255:39,0 chr1 150919479 . C . PASS END=150919488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,897:0,67,255:26,0 chr1 150921598 . G . PASS END=150921604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150921605 . G . PASS END=150921612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 150921613 . A . PASS END=150921618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 150921619 . C . PASS END=150921621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 150921622 . T . PASS END=150921622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 150921623 . T . PASS END=150921628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 150921629 . G . PASS END=150921630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 150921631 . A . PASS END=150921632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 150921633 . A . PASS END=150921633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 150921634 . C . PASS END=150921640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150921641 . T . PASS END=150921651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 150921652 . C . PASS END=150921657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 150921658 . C . PASS END=150921661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150921662 . G . PASS END=150921710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1133:0,93,255:31,0 chr1 150921711 . T . PASS END=150921717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 150921718 . C . PASS END=150921718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150921719 . T . PASS END=150921725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1030:0,68,255:26,0 chr1 150921726 . C . PASS END=150921731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 150921732 . T . PASS END=150921733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 150921734 . C . PASS END=150921754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1141:0,90,255:36,0 chr1 150921843 . A . PASS END=150921991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:84:33:0,84,1350:0,84,255:40,0 chr1 150921992 . A . PASS END=150922001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,85,255:24,0 chr1 150922934 . A . PASS END=150922951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 150922952 . A . PASS END=150922952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 150922953 . G . PASS END=150922954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 150922955 . C . PASS END=150922956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 150922957 . C . PASS END=150922961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 150922962 . C . PASS END=150922995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:17,0 chr1 150922996 . C . PASS END=150922996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 150922997 . C . PASS END=150923006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:17,0 chr1 150923007 . C . PASS END=150923007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 150923008 . A . PASS END=150923011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 150923012 . C . PASS END=150923012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 150923013 . A . PASS END=150923027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 150923028 . C . PASS END=150923028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150923029 . C . PASS END=150923029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 150923030 . A . PASS END=150923030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150923031 . G . PASS END=150923031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:19,0 chr1 150923032 . C . PASS END=150923032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 150923033 . A . PASS END=150923036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 150923037 . C . PASS END=150923043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,55,255:19,0 chr1 150923044 . A . PASS END=150923047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 150923048 . T . PASS END=150923048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:20,0 chr1 150923049 . G . PASS END=150923052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150923053 . C . PASS END=150923053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 150923054 . C . PASS END=150923058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150923059 . A . PASS END=150923059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 150923060 . G . PASS END=150923061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,681:0,60,255:20,0 chr1 150923062 . A . PASS END=150923062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 150923063 . G . PASS END=150923063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 150923064 . C . PASS END=150923065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 150923066 . T . PASS END=150923066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 150923067 . T . PASS END=150923072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 150923073 . T . PASS END=150923073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr1 150923074 . T . PASS END=150923075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150923076 . C . PASS END=150923076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 150923077 . C . PASS END=150923079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150923080 . A . PASS END=150923088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,713:0,47,255:19,0 chr1 150923089 . G . PASS END=150923098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,862:0,72,255:24,0 chr1 150923099 . T C, 50.00 PASS DP=24;MQ=247.21;MQRankSum=4.128;ReadPosRankSum=-0.606;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:4,5,0:8,7,0:48:85,0,50,429,413,842:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.2914e+02,4.4853e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,7,5:5,7,6,6 chr1 150923100 . C . PASS END=150923107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,862:0,75,255:25,0 chr1 150923108 . A . PASS END=150923125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1202:0,83,255:31,0 chr1 150923126 . T . PASS END=150923126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 150923127 . G . PASS END=150923136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:34,0 chr1 150923137 . G . PASS END=150923137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:32,0 chr1 150923138 . G . PASS END=150923213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:91:34:0,91,1090:0,91,255:38,0 chr1 150923214 . A . PASS END=150923214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1120:0,78,255:34,0 chr1 150923215 . T . PASS END=150923243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:36:0,95,1319:0,95,255:37,0 chr1 150923244 . T . PASS END=150923244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1316:0,70,255:34,0 chr1 150923245 . G . PASS END=150923570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:38:0,97,1343:0,97,255:40,0 chr1 150923841 . G . PASS END=150923952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:41:0,98,1443:0,98,255:40,0 chr1 150923953 . A . PASS END=150923953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1236:0,70,255:32,0 chr1 150923954 . C . PASS END=150923957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,95,255:32,0 chr1 150931654 . G . PASS END=150931796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:39:0,89,1350:0,89,255:40,0 chr1 150931797 . A . PASS END=150931799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 150931800 . G . PASS END=150931808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:35,0 chr1 150931809 . T . PASS END=150931809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,953:0,71,255:33,0 chr1 150931810 . T . PASS END=150931823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1152:0,88,255:35,0 chr1 150933039 . G . PASS END=150933044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,634:0,60,255:20,0 chr1 150933045 . T . LowGQ END=150933045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,512:4,0,255:17,0 chr1 150933046 . C . PASS END=150933046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 150933047 . C . PASS END=150933047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 150933048 . T . PASS END=150933048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 150933049 . G . PASS END=150933052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 150933053 . G . PASS END=150933053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 150933054 . A . PASS END=150933054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,615:0,30,255:19,0 chr1 150933055 . T . PASS END=150933057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 150933058 . C . PASS END=150933058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 150933059 . T . PASS END=150933060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,642:0,63,255:21,0 chr1 150933061 . T . PASS END=150933061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr1 150933062 . G . PASS END=150933062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 150933063 . C . PASS END=150933063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr1 150933064 . A . PASS END=150933064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:20,0 chr1 150933065 . G . PASS END=150933068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 150933069 . A . PASS END=150933069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 150933070 . G . PASS END=150933071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 150933072 . A . PASS END=150933072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 150933073 . G . PASS END=150933082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:23:0,66,955:0,67,255:26,0 chr1 150933083 . A . PASS END=150933084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,955:0,45,255:26,0 chr1 150933085 . G . PASS END=150933085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150933086 . G . PASS END=150933107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1118:0,84,255:33,0 chr1 150933108 . T . PASS END=150933108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1147:0,55,255:31,0 chr1 150933109 . G . PASS END=150933251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1147:0,81,255:40,0 chr1 150933252 . G . PASS END=150933252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr1 150933253 . C . PASS END=150933267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1371:0,95,255:36,0 chr1 150933268 . C . PASS END=150933268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:32,0 chr1 150933269 . T . PASS END=150933338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1211:0,87,255:36,0 chr1 150933339 . A . PASS END=150933349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 150933350 . G . PASS END=150933380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 150933381 . A . PASS END=150933381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,529:0,24,255:16,0 chr1 150933382 . C . PASS END=150933384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,607:0,40,255:19,0 chr1 150933385 . C . PASS END=150933387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150933388 . A . PASS END=150933388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,645:0,33,255:19,0 chr1 150933389 . G . PASS END=150933389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150933390 . A . PASS END=150933390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,574:0,16,255:16,0 chr1 150933391 . T . PASS END=150933402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr1 150933403 . A . PASS END=150933403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,570:0,29,255:17,0 chr1 150933404 . C . PASS END=150933406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,654:0,46,255:19,0 chr1 150933407 . A . PASS END=150933407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:17,0 chr1 150933408 . T . PASS END=150933436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,613:0,40,255:19,0 chr1 150933437 . G . PASS END=150933437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 150933438 . G . PASS END=150933464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,770:0,63,255:26,0 chr1 150933465 . C . PASS END=150933615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1025:0,84,255:40,0 chr1 150933616 . C . PASS END=150933616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:31,0 chr1 150933617 . T . PASS END=150933624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:33,0 chr1 150933625 . A . PASS END=150933625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 150933626 . G . PASS END=150933637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1202:0,86,255:33,0 chr1 150933638 . G . PASS END=150933638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 150933639 . A . PASS END=150933642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 150933643 . A . PASS END=150933644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 150933645 . A . PASS END=150933657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 150933658 . C . PASS END=150933667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 150934606 . G . PASS END=150934634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,144,255:40,0 chr1 150935063 . A . PASS END=150935179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1260:0,94,255:40,0 chr1 150935180 . T . PASS END=150935194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,78,255:24,0 chr1 150935195 . T . PASS END=150935195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:19,0 chr1 150935450 . G . PASS END=150935451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 150935452 . T . PASS END=150935452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:17,0 chr1 150935453 . G . PASS END=150935453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 150935454 . T . PASS END=150935462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150935463 . T . PASS END=150935463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 150935464 . G . PASS END=150935571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,99,1404:0,101,255:40,0 chr1 150935572 . T . PASS END=150935572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 150935573 . G . PASS END=150935586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:33,0 chr1 150935587 . T . PASS END=150935587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1125:0,68,255:30,0 chr1 150935588 . G . PASS END=150935599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr1 150935600 . A . PASS END=150935602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:31:0,69,1035:0,77,255:26,0 chr1 150935603 . A . PASS END=150935604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr1 150935605 . G . PASS END=150935605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 150935606 . A . PASS END=150935615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:22:0,48,720:0,50,255:19,0 chr1 150936006 . G . PASS END=150936327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:92:35:0,92,1280:0,92,255:40,0 chr1 150936471 . C . PASS END=150936559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:57:0,120,1800:0,142,255:40,0 chr1 150936723 . A . PASS END=150936951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:38:0,83,1395:0,83,255:40,0 chr1 150938624 . T . PASS END=150938653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:29:0,82,1064:0,82,255:37,0 chr1 150938654 . G . PASS END=150938764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1260:0,89,255:40,0 chr1 150938952 . C . PASS END=150938954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1349:0,108,255:36,0 chr1 150938955 . T . PASS END=150938955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:34,0 chr1 150938956 . C . PASS END=150938956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1388:0,108,255:36,0 chr1 150938957 . C . PASS END=150938957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:33,0 chr1 150938958 . A . PASS END=150939105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:36:0,92,1281:0,92,255:40,0 chr1 150939232 . C . PASS END=150939243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,177,255:40,0 chr1 150939244 . A . PASS END=150939280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:71:0,120,1800:0,192,255:40,0 chr1 150939281 . C T, 50.00 PASS DP=79;MQ=249.68;MQRankSum=7.261;ReadPosRankSum=6.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,40,0:0.506,0.000:79:16,18,0:23,22,0:48:85,0,50,1419,1379,2798:255,0,255:37,0:5.0000e+01,6.5233e-05,5.2987e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,22,16,24:18,21,18,22 chr1 150939282 . G . PASS END=150939318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:72:0,120,1800:0,202,255:40,0 chr1 150939319 . T . PASS END=150939338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,174,255:40,0 chr1 150939543 . G . PASS END=150939678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:35:0,87,1332:0,87,255:40,0 chr1 150939868 . C . PASS END=150939960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:33:0,87,1288:0,87,255:40,0 chr1 150940140 . C . PASS END=150940201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:34:0,82,1314:0,82,255:40,0 chr1 150940296 . A . PASS END=150940299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,915:0,64,255:22,0 chr1 150940300 . A . PASS END=150940300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 150940301 . C . PASS END=150940304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 150940305 . G . PASS END=150940305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 150940306 . A . PASS END=150940311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 150940312 . A . PASS END=150940312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 150940313 . T . PASS END=150940314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 150940315 . C . PASS END=150940327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 150940328 . C . PASS END=150940328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 150940329 . A . PASS END=150940337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 150940338 . A . PASS END=150940338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:18,0 chr1 150940339 . A . PASS END=150940347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 150940348 . C . PASS END=150940353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150940559 . C . PASS END=150940567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,585:0,54,255:18,0 chr1 150940568 . C . PASS END=150940568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 150940569 . G . PASS END=150940570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 150940571 . A . PASS END=150940571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 150940572 . A . PASS END=150940583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,609:0,43,255:19,0 chr1 150940584 . G . PASS END=150940591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 150940592 . C . PASS END=150940592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,703:0,52,255:22,0 chr1 150940593 . G . PASS END=150940620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,894:0,72,255:26,0 chr1 150940621 . A . PASS END=150940621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 150940622 . C . PASS END=150940651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 150940652 . T . PASS END=150940672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 150940673 . T . PASS END=150940677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 150940871 . C . PASS END=150940871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 150940872 . T . PASS END=150940985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:30:0,82,1180:0,82,255:40,0 chr1 150940986 . T . PASS END=150940986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 150940987 . A . PASS END=150940988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 150941394 . A . PASS END=150941394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 150941395 . G . PASS END=150941402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,956:0,84,255:28,0 chr1 150941403 . A . PASS END=150941403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:27,0 chr1 150941404 . A . PASS END=150941418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1036:0,84,255:36,0 chr1 150941419 . G . PASS END=150941428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1227:0,91,255:38,0 chr1 150941429 . G . PASS END=150941429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr1 150941430 . G . PASS END=150941567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:41:0,107,1512:0,107,255:40,0 chr1 150944325 . C . PASS END=150944383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:42:0,93,1449:0,93,255:40,0 chr1 150955582 . A . PASS END=150955582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 150955583 . T . PASS END=150955583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr1 150955584 . G . PASS END=150955584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 150955585 . T . PASS END=150955585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr1 150955586 . C . PASS END=150955600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1141:0,80,255:34,0 chr1 150955601 . A . PASS END=150955601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 150955602 . G . PASS END=150955642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1172:0,85,255:35,0 chr1 150955643 . G . PASS END=150955643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1217:0,53,255:31,0 chr1 150955644 . C . PASS END=150955656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1263:0,89,255:32,0 chr1 150955814 . A . PASS END=150955860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1194:0,83,255:33,0 chr1 150955861 . C . PASS END=150955861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 150955862 . A . PASS END=150955878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 150955879 . G . PASS END=150955880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 150955881 . A . PASS END=150955881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:21,0 chr1 150955882 . G . PASS END=150955891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:23,0 chr1 150955892 . A . PASS END=150955898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 150955899 . T . PASS END=150955901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 150955902 . C . PASS END=150955910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 150956451 . G . PASS END=150956545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:35:0,82,1288:0,82,255:40,0 chr1 150956757 . G . PASS END=150956870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:42:0,96,1504:0,96,255:40,0 chr1 150957062 . G . PASS END=150957152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,90,255:40,0 chr1 150958812 . A . PASS END=150958812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 150958813 . T . PASS END=150958813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 150958814 . T . PASS END=150958817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 150958818 . A . PASS END=150958818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 150958819 . G . PASS END=150958832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1174:0,96,255:36,0 chr1 150958833 . A . PASS END=150958833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:35,0 chr1 150958834 . T . PASS END=150958840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1327:0,95,255:37,0 chr1 150958841 . A . PASS END=150958841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr1 150958842 . C . PASS END=150958891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1164:0,85,255:36,0 chr1 150959078 . G . PASS END=150959137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,120,1800:0,126,255:40,0 chr1 150960348 . G . PASS END=150960349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 150960350 . A C, 37.79 PASS DP=31;MQ=250.00;MQRankSum=4.287;ReadPosRankSum=2.198;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,9,0:0.290,0.000:31:10,2,0:12,7,0:38:73,0,50,322,787,1109:255,0,255:22,0:3.7790e+01,7.4429e-04,5.3001e+01,3.2192e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,8,5,4:14,8,4,5 chr1 150960351 . C . PASS END=150960387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:31:0,93,1172:0,93,255:40,0 chr1 150960388 . G . PASS END=150960432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,119,1651:0,119,255:40,0 chr1 150960567 . T . PASS END=150960568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 150960569 . T . PASS END=150960569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 150960570 . T . PASS END=150960581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:33,0 chr1 150960582 . A . PASS END=150960582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1141:0,55,255:29,0 chr1 150960583 . G . PASS END=150960662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:35:0,81,1212:0,81,255:38,0 chr1 150960759 . C . PASS END=150960817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:37:0,99,1418:0,99,255:40,0 chr1 150967053 . G . PASS END=150967064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1049:0,87,255:29,0 chr1 150967065 . A . PASS END=150967069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:28,0 chr1 150967070 . C . PASS END=150967072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150967073 . A . PASS END=150967074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:30:0,75,1103:0,79,255:27,0 chr1 150967075 . T . PASS END=150967170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:28:0,81,1215:0,83,255:40,0 chr1 150967171 . T . PASS END=150967175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 150967736 . G . PASS END=150967738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 150967739 . G . PASS END=150967739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 150967740 . C . PASS END=150967798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 150969763 . C . PASS END=150969780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 150969781 . T . PASS END=150969781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 150969782 . G . PASS END=150969821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:19,0 chr1 150969822 . G . PASS END=150969824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 150969825 . C . PASS END=150969843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:19,0 chr1 150969917 . T . PASS END=150969930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr1 150969931 . G . PASS END=150969945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,501:0,42,255:16,0 chr1 150969946 . A . PASS END=150969954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 150969955 . A . PASS END=150969963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,566:0,45,255:17,0 chr1 150969964 . A . PASS END=150969964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 150969965 . G . PASS END=150969977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,706:0,54,255:19,0 chr1 150969978 . G . PASS END=150969979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 150969980 . C . PASS END=150969980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 150969981 . A . PASS END=150969982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 150969983 . G . PASS END=150969991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 150969992 . T C, 109.74 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,8,0:0,13,0:60:148,63,0,782,63,782:255,63,0:0,0:1.0974e+02,5.9743e+01,4.6595e-06,4.5000e+02,9.4513e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,8:0,0,8,13 chr1 150969993 . C . PASS END=150970001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 150970002 . G . PASS END=150970002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 150970003 . A . PASS END=150970003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 150970004 . A . PASS END=150970017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:24,0 chr1 150970018 . C . PASS END=150970018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:21,0 chr1 150970019 . A . PASS END=150970026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 150970027 . A . PASS END=150970029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 150970030 . A . PASS END=150970030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 150970031 . A . PASS END=150970031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr1 150970032 . C . PASS END=150970033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 150970034 . G . PASS END=150970034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 150970035 . G . PASS END=150970088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1078:0,83,255:36,0 chr1 150970089 . C . PASS END=150970089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr1 150970090 . A . PASS END=150970160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1155:0,80,255:35,0 chr1 150970161 . T . PASS END=150970161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 150970162 . C . PASS END=150970175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 150970176 . T . PASS END=150970186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 150970187 . C . PASS END=150970198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 150970199 . A . PASS END=150970205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 150970206 . A . PASS END=150970207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 150970208 . C . PASS END=150970241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:25,0 chr1 150970242 . G . PASS END=150970255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,53,255:19,0 chr1 150970558 . C . PASS END=150970564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,737:0,57,255:19,0 chr1 150970565 . A . PASS END=150970576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,821:0,66,255:22,0 chr1 150970577 . G T, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,13,0:0,9,0:63:151,66,0,853,66,853:255,66,0:0,0:1.1321e+02,6.3214e+01,2.0709e-06,4.5000e+02,9.7984e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,10:0,0,13,9 chr1 150970578 . T . PASS END=150970590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,787:0,69,255:26,0 chr1 150970591 . A . PASS END=150970614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1078:0,84,255:37,0 chr1 150970615 . C . PASS END=150970640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1496:0,104,255:37,0 chr1 150970641 . A . PASS END=150970641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr1 150970642 . G . PASS END=150970703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:36:0,86,1332:0,86,255:40,0 chr1 150970704 . C . PASS END=150970704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:31,0 chr1 150970705 . C . PASS END=150970730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1180:0,84,255:33,0 chr1 150970731 . C . PASS END=150970749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,900:0,63,255:26,0 chr1 150971845 . C . PASS END=150971957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:31:0,82,1135:0,82,255:40,0 chr1 150971958 . T . PASS END=150971958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 150971959 . G . PASS END=150971975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1117:0,80,255:32,0 chr1 150971976 . C . PASS END=150971987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,67,255:25,0 chr1 150972338 . C . PASS END=150972443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,111,1559:0,113,255:40,0 chr1 150972933 . C . PASS END=150973086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:33:0,83,1186:0,83,255:40,0 chr1 150973087 . A . PASS END=150973087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 150973088 . C . PASS END=150973091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 150973726 . C . PASS END=150973750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:40:0,85,1450:0,85,255:40,0 chr1 150973751 . T . PASS END=150973790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,110,1565:0,110,255:40,0 chr1 150974201 . C . PASS END=150974226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 150974227 . G . PASS END=150974229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 150974230 . A . PASS END=150974235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 150974236 . T . PASS END=150974258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:26,0 chr1 150974641 . C . PASS END=150974656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:23,0 chr1 150974657 . A . PASS END=150974657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 150974658 . G . PASS END=150974666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 150974667 . T . PASS END=150974673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:29,0 chr1 150974674 . A . PASS END=150974675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 150974676 . G . PASS END=150974719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1040:0,80,255:35,0 chr1 150974720 . T . PASS END=150974720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:28,0 chr1 150974721 . G . PASS END=150974729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 150974730 . T . PASS END=150974730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 150974731 . C . PASS END=150974737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 150974738 . A . PASS END=150974751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,68,255:26,0 chr1 150974752 . G . PASS END=150974758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:28,0 chr1 150974759 . T . PASS END=150974759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 150974760 . C . PASS END=150974765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 150974766 . C . PASS END=150974766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 150974767 . A . PASS END=150974776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1001:0,84,255:29,0 chr1 150974777 . G . PASS END=150974811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,67,255:26,0 chr1 150974812 . G . PASS END=150974812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 150974813 . C . PASS END=150974828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:23,0 chr1 150974829 . C . PASS END=150974829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 150974830 . T . PASS END=150974834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:25,0 chr1 150974835 . C . PASS END=150974835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 150974836 . A . PASS END=150974860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:27,0 chr1 150974861 . G . PASS END=150974864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1086:0,84,255:29,0 chr1 150974865 . G . PASS END=150974875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:26,0 chr1 150974876 . G . PASS END=150974893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1116:0,84,255:29,0 chr1 150974894 . T . PASS END=150974900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 150974901 . T . PASS END=150975070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1115:0,86,255:40,0 chr1 150975071 . T . PASS END=150975107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:36:0,95,1295:0,95,255:40,0 chr1 150975108 . T C, 181.97 PASS DP=45;MQ=249.51;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,20,0:0,25,0:132:220,135,0,1699,135,1699:255,135,0:0,0:1.8197e+02,1.3197e+02,0.0000e+00,4.5000e+02,1.6674e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,23:0,0,31,14 chr1 150975109 . G . PASS END=150975145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,99,1485:0,110,255:40,0 chr1 150975146 . A . PASS END=150975182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1274:0,92,255:36,0 chr1 150978577 . A . PASS END=150978631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,137,255:40,0 chr1 150981109 . A . PASS END=150981126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1207:0,89,255:34,0 chr1 150981127 . G . PASS END=150981127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:29,0 chr1 150981128 . G . PASS END=150981128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 150981129 . T . PASS END=150981130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1058:0,60,255:29,0 chr1 150981131 . G . PASS END=150981131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 150981132 . T . PASS END=150981136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr1 150981137 . C . PASS END=150981137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 150981138 . T . PASS END=150981138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1084:0,52,255:27,0 chr1 150981139 . G . PASS END=150981139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 150981140 . C . PASS END=150981147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1186:0,86,255:31,0 chr1 150990288 . G . PASS END=150990380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:31:0,92,1164:0,92,255:40,0 chr1 150990382 . T . PASS END=150990382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 150990943 . A . PASS END=150991108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:34:0,90,1299:0,90,255:40,0 chr1 150991109 . T . PASS END=150991115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 150991116 . C . PASS END=150991117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 150991118 . T . PASS END=150991138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,872:0,64,255:25,0 chr1 150991139 . T . PASS END=150991139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 150991140 . A . PASS END=150991140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 150991141 . T . PASS END=150991145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 150997087 . A . PASS END=150997096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,631:0,54,255:19,0 chr1 150997097 . G . PASS END=150997111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,809:0,69,255:26,0 chr1 150997112 . G . PASS END=150997189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,1016:0,80,255:34,0 chr1 150997190 . T . PASS END=150997193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:25,0 chr1 150997194 . G . PASS END=150997194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 150997195 . T . PASS END=150997198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:34:0,78,1170:0,94,255:26,0 chr1 150997199 . A . PASS END=150997201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 150997202 . C . PASS END=150997202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:25,0 chr1 150997203 . T . PASS END=150997207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:27,0 chr1 150997208 . A . PASS END=150997243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 150997244 . G . PASS END=150997244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 150997245 . A . PASS END=150997251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 150997252 . A . PASS END=150997271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:19:0,42,630:0,44,255:19,0 chr1 150997989 . A . PASS END=150997989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 150997991 . G . PASS END=150998149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:41:0,108,1620:0,110,255:40,0 chr1 150999709 . G . PASS END=150999803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,113,1566:0,113,255:40,0 chr1 151001262 . G . PASS END=151001267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,876:0,64,255:26,0 chr1 151001268 . C . PASS END=151001414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:28:0,81,1215:0,84,255:40,0 chr1 151001415 . A . PASS END=151001415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 151001416 . C . PASS END=151001416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:25,0 chr1 151001417 . A . PASS END=151001420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr1 151006282 . A . PASS END=151006301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,566:0,41,255:18,0 chr1 151006302 . C . PASS END=151006303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 151006304 . C . PASS END=151006304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 151006305 . C . PASS END=151006305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 151006306 . C . PASS END=151006306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 151006307 . A . PASS END=151006307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 151006308 . C . PASS END=151006312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:24,0 chr1 151006313 . C . PASS END=151006313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 151006314 . A . PASS END=151006323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,969:0,65,255:26,0 chr1 151006324 . C . PASS END=151006325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 151006326 . G . PASS END=151006332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 151006333 . G . PASS END=151006344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 151006345 . C . PASS END=151006346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151006347 . C . PASS END=151006356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 151006357 . C . PASS END=151006358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 151006359 . T . PASS END=151006361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 151006362 . C . PASS END=151006362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 151006363 . T . PASS END=151006364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151006365 . T . PASS END=151006365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 151006366 . C . PASS END=151006391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1058:0,80,255:31,0 chr1 151006392 . A . PASS END=151006392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 151006393 . A . PASS END=151006423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 151006424 . T . PASS END=151006424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 151006425 . G . PASS END=151006431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 151006432 . T . PASS END=151006454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:26:0,60,900:0,65,255:26,0 chr1 151006455 . T . PASS END=151006463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:22:0,48,720:0,66,255:19,0 chr1 151006464 . G . PASS END=151006468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 151006469 . A . PASS END=151006470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 151006471 . A . PASS END=151006473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 151006474 . G . PASS END=151006476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 151006477 . G . PASS END=151006478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151006479 . T . PASS END=151006479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151006480 . G . PASS END=151006485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 151006486 . A . PASS END=151006501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 151006502 . A . PASS END=151006531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 151006532 . T . PASS END=151006538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 151006539 . C A, 112.75 PASS DP=22;MQ=234.14;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,11,0:0,11,0:63:151,66,0,813,66,813:255,66,0:0,0:1.1275e+02,6.2750e+01,2.3297e-06,4.5000e+02,9.7520e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,11:0,0,6,16 chr1 151006540 . C . PASS END=151006563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr1 151006564 . C . PASS END=151006565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 151006566 . G . PASS END=151006572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 151006573 . C . PASS END=151006575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151006576 . A . PASS END=151006576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151006577 . C . PASS END=151006591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 151006592 . T . PASS END=151006593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 151006594 . G . PASS END=151006594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151006595 . T . PASS END=151006595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 151006596 . G . PASS END=151006597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 151006598 . A . PASS END=151006598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 151006599 . T . PASS END=151006624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 151006625 . C . PASS END=151006625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 151006626 . T . PASS END=151006626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 151006627 . A . PASS END=151006630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 151006631 . T . PASS END=151006631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 151006632 . C . PASS END=151006632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 151006633 . T . PASS END=151006633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 151006634 . C . PASS END=151006642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 151006643 . C . PASS END=151006683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,617:0,40,255:19,0 chr1 151006684 . A . PASS END=151006710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:13,0 chr1 151009202 . A . PASS END=151009207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:69:0,120,1800:0,194,255:40,0 chr1 151009208 . A G, 50.00 PASS DP=71;MQ=249.89;MQRankSum=7.153;ReadPosRankSum=5.617;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,41,0:0.577,0.000:71:15,18,0:15,23,0:47:85,0,48,1401,1065,2466:255,0,255:30,0:5.0000e+01,7.7400e-05,5.1071e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,20,21:13,17,25,16 chr1 151009209 . C . PASS END=151009242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,201,255:40,0 chr1 151010043 . G . PASS END=151010060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1335:0,95,255:36,0 chr1 151010061 . A . PASS END=151010061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 151010062 . G . PASS END=151010138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:34:0,84,1260:0,95,255:40,0 chr1 151010980 . A . PASS END=151011044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,135,255:40,0 chr1 151011272 . C . PASS END=151011281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 151011282 . C . PASS END=151011289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 151011290 . C . PASS END=151011476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:32:0,81,1099:0,83,255:40,0 chr1 151011477 . C . PASS END=151011500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 151011501 . A . PASS END=151011502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr1 151015432 . A . PASS END=151015434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:26:0,71,947:0,71,255:27,0 chr1 151015435 . A . PASS END=151015586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1202:0,86,255:40,0 chr1 151015587 . C . PASS END=151015599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,990:0,63,255:26,0 chr1 151015600 . T . PASS END=151015600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,866:0,48,255:21,0 chr1 151015601 . C . PASS END=151015608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 151015609 . A . PASS END=151015609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 151015610 . T . PASS END=151015614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 151015808 . G . PASS END=151015910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,167,255:40,0 chr1 151016072 . G . PASS END=151016179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,81,255:40,0 chr1 151016180 . G . PASS END=151016203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:25:0,62,906:0,62,255:26,0 chr1 151017356 . A . PASS END=151017365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:34,0 chr1 151018273 . G . PASS END=151018346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,113,1423:0,113,255:40,0 chr1 151018347 . G . PASS END=151018359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,99,1541:0,99,255:40,0 chr1 151018543 . T . PASS END=151018629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1002:0,81,255:39,0 chr1 151018630 . A . PASS END=151018641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,885:0,64,255:25,0 chr1 151019127 . G . PASS END=151019142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1454:0,107,255:40,0 chr1 151019143 . C . PASS END=151019163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1466:0,107,255:40,0 chr1 151020324 . A . PASS END=151020346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 151020347 . G . PASS END=151020351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151020352 . G . PASS END=151020365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 151020366 . A . PASS END=151020366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 151020367 . A . PASS END=151020393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:13,0 chr1 151020394 . A . PASS END=151020394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 151020395 . A . PASS END=151020402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 151020403 . C . PASS END=151020447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:17,0 chr1 151020448 . G . PASS END=151020462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,496:0,39,255:13,0 chr1 151020463 . G . PASS END=151020484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr1 151020485 . T . PASS END=151020497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 151020498 . A . PASS END=151020500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 151020501 . A . PASS END=151020501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 151020502 . C . PASS END=151020502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 151020503 . A . PASS END=151020503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 151020504 . A . PASS END=151020510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 151020511 . T . PASS END=151020523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 151020524 . G . PASS END=151020524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 151020525 . A . PASS END=151020526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151020527 . T . PASS END=151020527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 151020528 . G . PASS END=151020530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 151020531 . G . PASS END=151020531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151020532 . C . PASS END=151020533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151020534 . A . PASS END=151020535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 151020536 . G . PASS END=151020554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:25,0 chr1 151020555 . G . PASS END=151020556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 151020557 . T . PASS END=151020569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 151020570 . G . PASS END=151020573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 151020574 . A . PASS END=151020575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1030:0,68,255:28,0 chr1 151020576 . C . PASS END=151020578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 151020579 . T . PASS END=151020579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 151020580 . T . PASS END=151020592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 151020593 . G . PASS END=151020593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 151020594 . T . PASS END=151020598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 151020599 . C . PASS END=151020599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 151020600 . G . PASS END=151020607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 151020608 . C . PASS END=151020608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 151020609 . C . PASS END=151020615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151020616 . C . PASS END=151020616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151020617 . C . PASS END=151020626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 151020627 . G . PASS END=151020627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 151020628 . A . PASS END=151020636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 151020637 . G . PASS END=151020637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151020638 . G . PASS END=151020638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151020639 . T . PASS END=151020639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 151020640 . C . PASS END=151020644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 151020645 . G . PASS END=151020646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 151020647 . A . PASS END=151020647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:25,0 chr1 151020648 . G . PASS END=151020653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 151020654 . G . PASS END=151020655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 151020656 . T . PASS END=151020656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 151020657 . G . PASS END=151020677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:29:0,83,1057:0,83,255:31,0 chr1 151020678 . A . PASS END=151020678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:29,0 chr1 151020679 . G . PASS END=151020703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 151020704 . G . PASS END=151020741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 151020742 . T . PASS END=151020742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 151020743 . A . PASS END=151020747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 151020748 . A . PASS END=151020752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 151020753 . C . PASS END=151020753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 151020754 . A . PASS END=151020793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 151020794 . C . PASS END=151020797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 151020798 . G . PASS END=151020803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 151020804 . T . PASS END=151020804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 151020805 . C . PASS END=151020875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 151020876 . T . PASS END=151020876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:15,0 chr1 151020877 . G . PASS END=151020900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 151020901 . T . PASS END=151020903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 151020904 . C . PASS END=151020904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 151020905 . A . PASS END=151020912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:23,0 chr1 151020913 . A . PASS END=151020913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 151020914 . G . PASS END=151020918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 151020919 . T . PASS END=151020919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 151020920 . G . PASS END=151020976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,886:0,62,255:26,0 chr1 151020977 . G . PASS END=151020996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr1 151020997 . A . PASS END=151021000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151021001 . G . PASS END=151021001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 151021002 . C . PASS END=151021020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1008:0,78,255:26,0 chr1 151021021 . T . PASS END=151021021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,882:0,39,255:24,0 chr1 151021022 . T . PASS END=151021024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 151021025 . A . PASS END=151021027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151021028 . T . PASS END=151021029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151021030 . G . PASS END=151021031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151021032 . G . PASS END=151021032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151021033 . C . PASS END=151021035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151021036 . T . PASS END=151021115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,839:0,65,255:26,0 chr1 151021116 . G . PASS END=151021116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 151021117 . A . PASS END=151021138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,922:0,72,255:26,0 chr1 151021139 . C . PASS END=151021171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,1055:0,80,255:30,0 chr1 151021172 . G . PASS END=151021172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:28,0 chr1 151021173 . A . PASS END=151021182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:30,0 chr1 151021183 . C . PASS END=151021183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:28,0 chr1 151021184 . C . PASS END=151021190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 151021191 . C . PASS END=151021192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr1 151021193 . C . PASS END=151021200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 151021201 . A . PASS END=151021201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,79,255:25,0 chr1 151021202 . C . PASS END=151021209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr1 151021210 . G . PASS END=151021210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 151021211 . C . PASS END=151021226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1194:0,83,255:29,0 chr1 151021227 . C . PASS END=151021227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151021228 . C . PASS END=151021233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 151021234 . G . PASS END=151021234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 151021235 . C . PASS END=151021240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1186:0,83,255:32,0 chr1 151021241 . C . PASS END=151021241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:31,0 chr1 151021242 . C . PASS END=151021251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1186:0,83,255:33,0 chr1 151021252 . C . PASS END=151021252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:32,0 chr1 151021253 . T . PASS END=151021278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1117:0,82,255:33,0 chr1 151021279 . T . PASS END=151021279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:28,0 chr1 151021280 . G . PASS END=151021283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 151021284 . G . PASS END=151021304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1023:0,71,255:26,0 chr1 151021305 . T . PASS END=151021305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 151021306 . C . PASS END=151021307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 151021308 . G . PASS END=151021328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:18:0,43,668:0,43,255:19,0 chr1 151022914 . A . PASS END=151022934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,162,255:40,0 chr1 151026723 . C . PASS END=151026777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:57:0,120,1800:0,161,255:40,0 chr1 151026778 . T . PASS END=151026797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,141,255:40,0 chr1 151027492 . C . PASS END=151027492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151027493 . A . PASS END=151027493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 151027494 . T . PASS END=151027494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 151027495 . G . PASS END=151027499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 151027500 . G . PASS END=151027501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 151027502 . C . PASS END=151027502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 151027503 . C . PASS END=151027517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,874:0,84,255:30,0 chr1 151027518 . T . PASS END=151027518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 151027519 . C . PASS END=151027566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1161:0,80,255:36,0 chr1 151027567 . A . PASS END=151027567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:31,0 chr1 151027568 . A . PASS END=151027590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr1 151027591 . T . PASS END=151027593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:26,0 chr1 151027594 . C . PASS END=151027594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151027595 . T . PASS END=151027602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1033:0,73,255:26,0 chr1 151028153 . C . PASS END=151028196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,103,1374:0,103,255:40,0 chr1 151028197 . A . PASS END=151028206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,119,1598:0,119,255:40,0 chr1 151039701 . A . PASS END=151039702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 151039703 . G . PASS END=151039712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr1 151039713 . G . PASS END=151039756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,535:0,42,255:19,0 chr1 151039757 . C . PASS END=151039758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151039759 . C . PASS END=151039759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151039760 . A . PASS END=151039809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,823:0,63,255:26,0 chr1 151039810 . C . PASS END=151039815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 151039816 . A . PASS END=151039817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151039818 . G . PASS END=151039820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151039821 . A . PASS END=151039821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 151039822 . A . PASS END=151039848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1020:0,90,255:30,0 chr1 151039849 . G . PASS END=151039853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 151039854 . G . PASS END=151039855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151039856 . A . PASS END=151039885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:26,0 chr1 151039886 . A . PASS END=151039886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:22,0 chr1 151039887 . G . PASS END=151039901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr1 151039902 . G . PASS END=151039903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 151039904 . G . PASS END=151039910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:20,0 chr1 151039911 . A . PASS END=151039921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:18,0 chr1 151039922 . C . PASS END=151039922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 151039923 . T . PASS END=151039923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 151039924 . G . PASS END=151039946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:23,0 chr1 151039947 . C . PASS END=151039971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr1 151039972 . A . PASS END=151039973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 151060267 . A . PASS END=151060302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,190,255:40,0 chr1 151060666 . A . PASS END=151060773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:89:48:0,89,1698:0,89,255:40,0 chr1 151060946 . T . PASS END=151060993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:98:0,120,1800:0,255,255:40,0 chr1 151062882 . C . PASS END=151063017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,1016:0,80,255:40,0 chr1 151063018 . G . PASS END=151063028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,79,255:25,0 chr1 151063029 . A . PASS END=151063049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,690:0,42,255:21,0 chr1 151065668 . A . PASS END=151065669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr1 151065670 . T . PASS END=151065670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 151065671 . G . PASS END=151065684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:24:0,68,906:0,68,255:26,0 chr1 151065685 . T . PASS END=151065703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1140:0,87,255:32,0 chr1 151065704 . A . PASS END=151065704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1044:0,63,255:30,0 chr1 151065705 . T . PASS END=151065838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1101:0,80,255:40,0 chr1 151065839 . G . PASS END=151065839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr1 151065840 . C . PASS END=151065862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1260:0,81,255:37,0 chr1 151070328 . G . PASS END=151070339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,790:0,63,255:26,0 chr1 151070340 . A . PASS END=151070340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr1 151070341 . A . PASS END=151070346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 151070347 . T . PASS END=151070347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 151070348 . G . PASS END=151070348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 151070349 . A . PASS END=151070350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 151070351 . T . PASS END=151070351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 151070352 . G . PASS END=151070353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 151070354 . T . PASS END=151070355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:64:27:0,64,894:0,64,255:28,0 chr1 151070356 . A . PASS END=151070356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 151070357 . T . PASS END=151070357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 151070358 . C . PASS END=151070365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:30,0 chr1 151070366 . A . PASS END=151070366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1092:0,44,255:31,0 chr1 151070367 . G . PASS END=151070450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1042:0,80,255:40,0 chr1 151070451 . T . PASS END=151070451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:30,0 chr1 151070452 . C . PASS END=151070473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1156:0,90,255:31,0 chr1 151070474 . C . PASS END=151070478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:24,0 chr1 151076038 . G . PASS END=151076142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1260:0,90,255:40,0 chr1 151076143 . G . PASS END=151076149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:31:0,60,900:0,93,255:25,0 chr1 151076150 . A . PASS END=151076151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,810:0,76,255:18,0 chr1 151079513 . C . PASS END=151079522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 151079523 . G . PASS END=151079523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 151079524 . G . PASS END=151079524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 151079525 . A . PASS END=151079525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 151079526 . A . PASS END=151079548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:24,0 chr1 151079549 . A . PASS END=151079549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 151079550 . C . PASS END=151079551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 151079552 . C . PASS END=151079612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1147:0,83,255:34,0 chr1 151079613 . A . PASS END=151079616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 151079617 . C . PASS END=151079623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151079624 . G . PASS END=151079624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151079625 . T . PASS END=151079634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr1 151079635 . A . PASS END=151079635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,812:0,64,255:26,0 chr1 151079636 . C . PASS END=151079641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 151079642 . T . PASS END=151079680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr1 151079681 . T . PASS END=151079691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 151079692 . C . PASS END=151079692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 151079693 . A . PASS END=151079693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:12,0 chr1 151079694 . G . PASS END=151079698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 151089868 . T . PASS END=151089992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:39:0,99,1485:0,117,255:40,0 chr1 151090433 . G . PASS END=151090439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:26,0 chr1 151090440 . A . PASS END=151090459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,948:0,81,255:34,0 chr1 151090460 . C . PASS END=151090460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 151090461 . A . PASS END=151090571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1263:0,89,255:40,0 chr1 151090572 . A . PASS END=151090572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:36,0 chr1 151090573 . G . PASS END=151090577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1352:0,86,255:37,0 chr1 151090578 . A . PASS END=151090578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1266:0,62,255:35,0 chr1 151090579 . T . PASS END=151090579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1358:0,100,255:36,0 chr1 151090580 . G . PASS END=151090580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr1 151090581 . G . PASS END=151090650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:37:0,81,1377:0,81,255:40,2 chr1 151090651 . A . PASS END=151090652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1368:0,54,255:37,2 chr1 151090653 . A . PASS END=151090653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:38,0 chr1 151090654 . G . PASS END=151090688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1363:0,84,255:39,0 chr1 151090689 . C . PASS END=151090689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr1 151090690 . A . PASS END=151090732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1055:0,84,255:34,0 chr1 151104673 . T . PASS END=151104689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr1 151104690 . G . PASS END=151104699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 151104700 . G . PASS END=151104700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 151104701 . G . PASS END=151104705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 151104706 . G . PASS END=151104710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151104711 . T . PASS END=151104719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 151104720 . T . PASS END=151104720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 151104721 . C . PASS END=151104728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 151104729 . A . PASS END=151104755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 151104756 . T . PASS END=151104756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 151104757 . C . PASS END=151104776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 151104777 . C . PASS END=151104810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,263:0,21,255:9,0 chr1 151104811 . C . PASS END=151104821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 151104822 . A . PASS END=151104826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 151104827 . C . PASS END=151104838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:6,0 chr1 151104839 . C . PASS END=151104850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 151104851 . A . PASS END=151104853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 151104854 . G . PASS END=151104861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 151104862 . T . PASS END=151104862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 151104863 . G . PASS END=151104866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 151104867 . G . PASS END=151104867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 151104868 . G . PASS END=151104868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 151104869 . C . PASS END=151104869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 151104870 . G . PASS END=151104870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 151104871 . A . LowGQ END=151104871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:18,0,204:6,0 chr1 151104872 . G . PASS END=151104880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 151104881 . G . PASS END=151104881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 151104882 . A . PASS END=151104889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr1 151104890 . T . PASS END=151104890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 151104891 . G . PASS END=151104892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 151104893 . A . PASS END=151104894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 151104895 . A . LowGQ END=151104895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,139:34,0,173:4,0 chr1 151104896 . G . PASS END=151104897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,247:6,0 chr1 151104898 . G . PASS END=151104904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 151104905 . T . PASS END=151104905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 151104906 . C . PASS END=151104912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 151104913 . G . PASS END=151104933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:9,0 chr1 151104934 . A . PASS END=151104942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 151104943 . G . PASS END=151104943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 151104944 . C . PASS END=151104949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 151104950 . G A, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,7,0:0,5,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,5:0,0,6,6 chr1 151104951 . C . PASS END=151104963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 151104964 . A . PASS END=151104964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr1 151104965 . A . PASS END=151104987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,368:0,36,255:12,0 chr1 151104988 . A . PASS END=151104992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 151104993 . C . PASS END=151104999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 151105000 . G . PASS END=151105003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 151105004 . A . PASS END=151105004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 151105005 . G . PASS END=151105008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 151105009 . C . PASS END=151105009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 151105010 . C . PASS END=151105036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr1 151105037 . G . LowGQ END=151105037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 151105038 . G . PASS END=151105046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 151105047 . G . PASS END=151105048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 151105049 . C . PASS END=151105068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 151105069 . C . PASS END=151105095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 151105096 . A . PASS END=151105123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr1 151105124 . C . PASS END=151105124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 151105125 . G . PASS END=151105141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 151105142 . C . PASS END=151105142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 151105143 . T . PASS END=151105153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 151105154 . C . PASS END=151105154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr1 151105155 . T . PASS END=151105155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 151105156 . C . PASS END=151105164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,459:0,39,255:13,0 chr1 151105165 . A . PASS END=151105165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 151105166 . G . PASS END=151105178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr1 151105179 . C . PASS END=151105179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 151105180 . C . PASS END=151105193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 151105194 . A . PASS END=151105194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 151105195 . G . PASS END=151105197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151105198 . A . PASS END=151105199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151105200 . C . PASS END=151105208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151105209 . T . PASS END=151105222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:12,0 chr1 151105223 . G . PASS END=151105223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 151105224 . C . PASS END=151105260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 151105261 . G . PASS END=151105263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 151105264 . G . PASS END=151105266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 151105267 . G . PASS END=151105267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 151105268 . C . PASS END=151105268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,405:0,3,255:10,0 chr1 151105269 . G . PASS END=151105284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 151105285 . G . PASS END=151105320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,537:0,44,255:19,0 chr1 151105321 . G . PASS END=151105321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:15,0 chr1 151105322 . G . PASS END=151105324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:17,0 chr1 151105325 . T . PASS END=151105325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr1 151105326 . G . PASS END=151105337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:17:0,43,599:0,43,255:17,0 chr1 151105338 . G . PASS END=151105338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 151105339 . C . PASS END=151105341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 151105342 . A . PASS END=151105345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,577:0,43,255:19,0 chr1 151105346 . G . PASS END=151105375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:22,0 chr1 151105376 . G . PASS END=151105377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 151105378 . G . PASS END=151105379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 151105380 . G . PASS END=151105380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 151105381 . G . PASS END=151105383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr1 151105384 . A . PASS END=151105385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,687:0,52,255:22,0 chr1 151105386 . A . PASS END=151105386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:21,0 chr1 151105387 . G . PASS END=151105398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr1 151105399 . T . LowGQ END=151105399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,742:0,0,255:21,0 chr1 151105400 . C . PASS END=151105404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 151105405 . C . PASS END=151105405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 151105406 . C . PASS END=151105411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 151105412 . T . PASS END=151105415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 151105416 . C . PASS END=151105424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 151105425 . G . PASS END=151105427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 151105428 . G . PASS END=151105428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 151105429 . T . PASS END=151105434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:22:0,48,720:0,55,255:19,0 chr1 151105435 . T . PASS END=151105435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,739:0,30,255:16,0 chr1 151105436 . A . PASS END=151105454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:18,0 chr1 151105455 . G . PASS END=151105455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:16,0 chr1 151105456 . G . PASS END=151105458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,659:0,41,255:17,0 chr1 151105459 . G . PASS END=151105460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 151105461 . G . PASS END=151105465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 151105466 . C . PASS END=151105468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 151105469 . C . PASS END=151105469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 151105470 . G . PASS END=151105471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 151105472 . C . PASS END=151105474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 151105475 . G . PASS END=151105475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:18,0 chr1 151105476 . C . PASS END=151105486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,47,255:18,0 chr1 151105487 . C . PASS END=151105488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,43,255:13,0 chr1 151105489 . G . PASS END=151105489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 151105490 . G . PASS END=151105496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:33:17:0,33,495:0,35,255:13,0 chr1 151105497 . T . PASS END=151105497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:11,0 chr1 151105498 . G . PASS END=151105498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 151105499 . G . PASS END=151105500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr1 151105501 . C . PASS END=151105501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,604:0,10,255:14,0 chr1 151105502 . T . PASS END=151105509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 151105510 . A . PASS END=151105511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 151105512 . G . PASS END=151105512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 151105513 . C . PASS END=151105513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 151105514 . G . PASS END=151105517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,668:0,51,255:19,0 chr1 151105518 . C . PASS END=151105518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:1:19:0,1,507:0,1,255:17,0 chr1 151105519 . G . PASS END=151105520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,613:0,40,255:19,0 chr1 151105521 . G . PASS END=151105523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,642:0,60,255:20,0 chr1 151105524 . C . PASS END=151105524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 151105525 . C . PASS END=151105525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr1 151105526 . C . PASS END=151105548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,639:0,41,255:19,0 chr1 151105549 . G . PASS END=151105576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,691:0,60,255:26,0 chr1 151105577 . T . PASS END=151105577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 151105578 . C . PASS END=151105579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:24,0 chr1 151105580 . T . PASS END=151105580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 151105581 . G . PASS END=151105591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 151105592 . A . PASS END=151105592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 151105593 . C . PASS END=151105593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 151105594 . T . PASS END=151105594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 151105595 . C . PASS END=151105596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 151105597 . C . PASS END=151105597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 151105598 . A . PASS END=151105607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 151105608 . G . PASS END=151105608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 151105609 . G . PASS END=151105613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 151105614 . G . PASS END=151105614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 151105615 . C . PASS END=151105620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 151105621 . T . PASS END=151105621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 151105622 . G . PASS END=151105625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 151105626 . G . PASS END=151105626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 151105627 . A . PASS END=151105627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151105628 . C . PASS END=151105629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 151105630 . G . PASS END=151105631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151105632 . C . PASS END=151105632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:20,0 chr1 151105633 . A . PASS END=151105635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 151105636 . T . PASS END=151105639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,800:0,55,255:19,0 chr1 151105640 . G . PASS END=151105640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:17,0 chr1 151105641 . C . PASS END=151105642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 151105643 . T . PASS END=151105643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:16,0 chr1 151105644 . G . PASS END=151105648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,668:0,43,255:17,0 chr1 151105649 . C . PASS END=151105649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:15,0 chr1 151105650 . G . PASS END=151105659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,676:0,43,255:17,0 chr1 151105660 . A . PASS END=151105660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 151105661 . G . PASS END=151105665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 151105666 . G . PASS END=151105666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 151105667 . C . PASS END=151105699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,613:0,41,255:18,0 chr1 151105700 . G . PASS END=151105700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 151105701 . C . PASS END=151105703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 151105704 . G . PASS END=151105704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 151105705 . A . PASS END=151105707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 151105708 . G . PASS END=151105708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 151105709 . T . PASS END=151105720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 151105721 . G . PASS END=151105721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 151105722 . C . PASS END=151105727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,681:0,41,255:19,0 chr1 151105728 . C . PASS END=151105734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 151105735 . G . PASS END=151105743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 151105744 . T . PASS END=151105744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,720:0,19,255:15,0 chr1 151105745 . C . PASS END=151105752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:17,0 chr1 151105753 . G . PASS END=151105753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 151105754 . G . PASS END=151105764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,592:0,41,255:19,0 chr1 151105765 . T . PASS END=151105765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:18,0 chr1 151105766 . C . PASS END=151105785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,660:0,43,255:19,0 chr1 151105786 . C . PASS END=151105786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 151105787 . G . PASS END=151105789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:20,0 chr1 151105790 . C . PASS END=151105793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 151105794 . A . PASS END=151105794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 151105795 . C . PASS END=151105796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 151105797 . G . PASS END=151105797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 151105798 . C . PASS END=151105798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 151105799 . G . PASS END=151105802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 151105803 . G . PASS END=151105804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 151105805 . A . PASS END=151105805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 151105806 . G . PASS END=151105818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 151105819 . A . PASS END=151105819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 151105820 . G . PASS END=151105823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,787:0,69,255:24,0 chr1 151105824 . C G, 118.31 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,7,0:0,17,0:68:156,71,0,866,71,866:255,72,0:0,0:1.1831e+02,6.8307e+01,5.1772e-07,4.5000e+02,1.0308e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,13:0,0,6,18 chr1 151105825 . G . PASS END=151105825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 151105826 . G . PASS END=151105826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 151105827 . A . PASS END=151105827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 151105828 . G . PASS END=151105829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 151105830 . C . PASS END=151105845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr1 151105846 . C . PASS END=151105846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 151105847 . G . PASS END=151105861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1108:0,80,255:32,0 chr1 151105862 . G . PASS END=151105862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 151105863 . G . PASS END=151105863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:29,0 chr1 151105864 . C . PASS END=151105969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1180:0,83,255:40,0 chr1 151105970 . C . PASS END=151105993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,74,255:26,0 chr1 151106436 . C . PASS END=151106444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:19,0 chr1 151106445 . G . PASS END=151106445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:17,0 chr1 151106446 . A . PASS END=151106446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 151106447 . A . PASS END=151106447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,470:0,7,255:16,0 chr1 151106448 . C . PASS END=151106452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,637:0,43,255:19,0 chr1 151106453 . A . PASS END=151106453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,482:0,10,255:16,0 chr1 151106454 . G . PASS END=151106454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151106455 . A . PASS END=151106455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:20:0,26,485:0,26,255:17,0 chr1 151106456 . G . PASS END=151106456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151106457 . T . PASS END=151106458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,666:0,33,255:19,0 chr1 151106459 . G . PASS END=151106459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr1 151106460 . A . PASS END=151106460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,582:0,16,255:19,0 chr1 151106461 . A . PASS END=151106461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,645:0,33,255:20,0 chr1 151106462 . G . PASS END=151106462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,676:0,14,255:21,0 chr1 151106463 . A . LowGQ END=151106463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,499:17,0,255:20,0 chr1 151106464 . C . PASS END=151106464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,817:0,72,255:24,0 chr1 151106465 . T . LowGQ END=151106465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,5:24:0:24:0,0,587:11,0,255:19,0 chr1 151106466 . G . PASS END=151106467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,727:0,41,255:23,0 chr1 151106468 . G . PASS END=151106468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,701:0,24,255:22,0 chr1 151106469 . G . PASS END=151106469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 151106470 . C . PASS END=151106471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151106472 . G . PASS END=151106472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,753:0,17,255:21,0 chr1 151106473 . G . PASS END=151106474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,723:0,33,255:22,0 chr1 151106475 . G . LowGQ END=151106475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,670:6,0,255:20,0 chr1 151106476 . G . PASS END=151106476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,717:0,25,255:20,0 chr1 151106477 . T . LowGQ END=151106479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:24:0,0,516:0,0,255:20,0 chr1 151106480 . G . PASS END=151106483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,856:0,61,255:23,0 chr1 151106484 . C . PASS END=151106484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:20,0 chr1 151106485 . A . PASS END=151106487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 151106488 . G . PASS END=151106488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 151106489 . G . PASS END=151106493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 151106494 . A . PASS END=151106494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:21,0 chr1 151106495 . C . PASS END=151106510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,833:0,72,255:24,0 chr1 151106511 . A . PASS END=151106511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 151106512 . A . PASS END=151106512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 151106513 . G . PASS END=151106513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:21,0 chr1 151106514 . G . PASS END=151106517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 151106518 . A . PASS END=151106520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 151106521 . A . PASS END=151106521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 151106522 . C . PASS END=151106522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 151106523 . C . PASS END=151106531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 151106877 . C . PASS END=151106921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,119,1794:0,119,255:40,0 chr1 151107096 . C . PASS END=151107151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:40:0,91,1407:0,91,255:40,0 chr1 151107274 . C . PASS END=151107351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,120,1800:0,137,255:40,0 chr1 151107639 . C . PASS END=151107642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 151107643 . G . PASS END=151107644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 151107645 . C . PASS END=151107660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,894:0,72,255:26,0 chr1 151107661 . C . PASS END=151107748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1140:0,80,255:37,0 chr1 151107749 . C . PASS END=151107764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,884:0,61,255:25,0 chr1 151107765 . G . PASS END=151107765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 151107766 . C . PASS END=151107767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:20,0 chr1 151107768 . G . PASS END=151107771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 151107772 . G . PASS END=151107780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 151107781 . T . PASS END=151107785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:18,0 chr1 151108067 . C . PASS END=151108070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 151108071 . C . PASS END=151108071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 151108072 . A . PASS END=151108079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:17,0 chr1 151108080 . A . PASS END=151108080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 151108081 . G . PASS END=151108099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 151108100 . A . PASS END=151108114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 151108115 . C . PASS END=151108115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 151108116 . C . PASS END=151108119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 151108120 . G . PASS END=151108120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:18,0 chr1 151108121 . G . PASS END=151108136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 151108137 . T G, 106.74 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,7,0:0,13,0:57:145,60,0,746,60,746:255,60,0:0,0:1.0674e+02,5.6740e+01,9.3190e-06,4.5000e+02,9.1510e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,11:0,0,10,10 chr1 151108138 . C . PASS END=151108144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:25,0 chr1 151108145 . T . PASS END=151108145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 151108146 . T . PASS END=151108149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 151108150 . C . PASS END=151108161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr1 151108162 . A . PASS END=151108162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 151108163 . T . PASS END=151108163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,960:0,57,255:27,0 chr1 151108164 . T . PASS END=151108174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr1 151108175 . A . PASS END=151108183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1157:0,82,255:29,0 chr1 151108184 . G . PASS END=151108184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1043:0,62,255:27,0 chr1 151108185 . T . PASS END=151108185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 151108186 . G . PASS END=151108186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 151108187 . A . PASS END=151108187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151108188 . T . PASS END=151108188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 151108189 . G . PASS END=151108204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 151108205 . G . PASS END=151108221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 151108222 . T . PASS END=151108222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:24,0 chr1 151108223 . A . PASS END=151108223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,730:0,31,255:22,0 chr1 151108224 . C . PASS END=151108231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr1 151108232 . A . PASS END=151108232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 151108233 . G . PASS END=151108240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 151108487 . C . PASS END=151108491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151108492 . A . PASS END=151108492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:14,0 chr1 151108493 . G . PASS END=151108493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 151108494 . T . PASS END=151108494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:15,0 chr1 151108495 . G . PASS END=151108505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,584:0,48,255:18,0 chr1 151108506 . G . PASS END=151108506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 151108507 . A . PASS END=151108508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 151108509 . G . PASS END=151108509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 151108510 . C . PASS END=151108510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 151108511 . T . PASS END=151108513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 151108514 . T . PASS END=151108518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 151108519 . G . PASS END=151108519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 151108520 . A . PASS END=151108523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 151108524 . G . PASS END=151108536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,743:0,60,255:24,0 chr1 151108537 . G . PASS END=151108540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151108541 . A . PASS END=151108545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151108546 . C . PASS END=151108549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151108550 . T . PASS END=151108550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 151108551 . G . PASS END=151108554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 151108555 . C . PASS END=151108566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 151108567 . C . PASS END=151108567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 151108568 . A . PASS END=151108585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:26,0 chr1 151108586 . T . PASS END=151108586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:22,0 chr1 151108587 . C . PASS END=151108592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 151108593 . A . PASS END=151108593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 151108594 . A . PASS END=151108597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 151108598 . G . PASS END=151108628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 151108629 . A . PASS END=151108629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 151108630 . G . PASS END=151108631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 151108632 . A . PASS END=151108632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 151108633 . T . PASS END=151108639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 151108924 . C . PASS END=151108924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 151108925 . T . PASS END=151108925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 151108926 . G . PASS END=151109055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:33:0,86,1197:0,86,255:40,0 chr1 151109333 . C . PASS END=151109342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:25,0 chr1 151109343 . G . PASS END=151109348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 151109349 . T . PASS END=151109353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 151109354 . A . PASS END=151109354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,840:0,50,255:24,0 chr1 151109355 . C . PASS END=151109358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 151109359 . A . PASS END=151109359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:23,0 chr1 151109360 . A . PASS END=151109360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 151109361 . A . PASS END=151109361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,838:0,50,255:24,0 chr1 151109362 . G . PASS END=151109362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 151109363 . A . PASS END=151109365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:47:26:0,47,848:0,47,255:26,0 chr1 151109366 . G . PASS END=151109367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 151109368 . A . PASS END=151109368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,880:0,50,255:26,0 chr1 151109369 . G . PASS END=151109376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1015:0,84,255:28,0 chr1 151109377 . A . PASS END=151109377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 151109378 . T . PASS END=151109382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 151109383 . G . PASS END=151109395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 151109396 . G . PASS END=151109397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151109398 . C . PASS END=151109404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,904:0,73,255:26,0 chr1 151109405 . T . PASS END=151109406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151109407 . T . PASS END=151109407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 151109408 . A . PASS END=151109408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151109409 . A . PASS END=151109409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:26,0 chr1 151109410 . A . PASS END=151109413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 151109414 . T . PASS END=151109414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 151109415 . C . PASS END=151109416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151109417 . A . PASS END=151109417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:27,0 chr1 151109418 . A . PASS END=151109418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,878:0,40,255:26,0 chr1 151109419 . A . PASS END=151109419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151109420 . T . PASS END=151109421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,931:0,40,255:26,0 chr1 151109422 . G . PASS END=151109424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 151109425 . A . PASS END=151109425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:28,0 chr1 151109426 . G . PASS END=151109426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 151109427 . T . PASS END=151109430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 151109431 . G . PASS END=151109431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,942:0,56,255:28,0 chr1 151109432 . T . PASS END=151109437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 151109438 . G . PASS END=151109438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:26,0 chr1 151109439 . G . PASS END=151109439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151109440 . G . PASS END=151109440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 151109441 . A . PASS END=151109449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 151109450 . T . PASS END=151109461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1062:0,74,255:26,0 chr1 151109462 . T . PASS END=151109462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:25,0 chr1 151109463 . T . PASS END=151109483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 151109484 . G . PASS END=151109484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 151109485 . G . PASS END=151109497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:24,0 chr1 151109498 . G . PASS END=151109498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 151109499 . G . PASS END=151109532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:24,0 chr1 151109533 . T . PASS END=151109544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:52:23:0,52,717:0,52,255:19,0 chr1 151109545 . C . PASS END=151109545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151109546 . T . PASS END=151109550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151110187 . C . PASS END=151110275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:33:0,86,1231:0,86,255:40,0 chr1 151110462 . C . PASS END=151110462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 151110463 . T . PASS END=151110464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,778:0,30,255:22,0 chr1 151110465 . G . PASS END=151110469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 151110470 . C . PASS END=151110471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 151110472 . C . PASS END=151110518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,809:0,62,255:26,0 chr1 151110519 . T . PASS END=151110526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 151110527 . A . PASS END=151110527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:27,0 chr1 151110528 . C . PASS END=151110533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 151110534 . C . PASS END=151110534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 151110535 . A . PASS END=151110563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 151110564 . C . PASS END=151110581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,71,255:24,0 chr1 151110792 . C . PASS END=151110847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,962:0,81,255:34,0 chr1 151110848 . C . PASS END=151110848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:32,0 chr1 151110849 . T . PASS END=151110849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 151110850 . C . PASS END=151110850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:32,0 chr1 151110851 . A . PASS END=151110866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:34,0 chr1 151110867 . G . PASS END=151110867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1255:0,75,255:32,0 chr1 151110868 . C . PASS END=151110872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1233:0,86,255:32,0 chr1 151110873 . G . PASS END=151110873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr1 151110874 . C . PASS END=151110874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:31,0 chr1 151110875 . G . PASS END=151110875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 151110876 . A . PASS END=151110879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 151110880 . T . PASS END=151110880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:31,0 chr1 151110881 . A . PASS END=151110882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 151111106 . C . PASS END=151111207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,99,1485:0,106,255:40,0 chr1 151111901 . C . PASS END=151111954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:35:0,86,1270:0,86,255:39,0 chr1 151111955 . A . PASS END=151111955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1154:0,72,255:28,0 chr1 151111956 . T . PASS END=151111957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:30,0 chr1 151112114 . C . PASS END=151112121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:25,0 chr1 151112122 . G . PASS END=151112122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 151112123 . C . PASS END=151112141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 151112142 . T . PASS END=151112142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 151112143 . C . PASS END=151112164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:25,0 chr1 151112165 . G . PASS END=151112165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,1 chr1 151112166 . A . PASS END=151112166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:43:26:0,43,872:0,43,255:25,1 chr1 151112167 . A . PASS END=151112167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:26,0 chr1 151112168 . A . PASS END=151112177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,947:0,78,255:26,0 chr1 151112452 . C . PASS END=151112566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,119,1482:0,119,255:40,0 chr1 151114980 . C . PASS END=151114987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:5,0 chr1 151114988 . T . LowGQ END=151114988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 151114989 . C . PASS END=151114994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 151114995 . T . LowGQ END=151114995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 151114996 . C . PASS END=151115005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 151115006 . A . LowGQ END=151115006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 151115007 . G . PASS END=151115013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 151115014 . C . LowGQ END=151115014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 151115015 . T . PASS END=151115030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,141:0,15,141:6,0 chr1 151115031 . G . PASS END=151115039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 151115040 . G . PASS END=151115048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,197:6,0 chr1 151115049 . G . PASS END=151115049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 151115050 . C . PASS END=151115064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:5,0 chr1 151115065 . C . PASS END=151115080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 151115081 . T . PASS END=151115081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 151115082 . G . PASS END=151115097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 151131174 . A . PASS END=151131174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 151131175 . T . PASS END=151131197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 151131198 . C . PASS END=151131210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 151131211 . C . PASS END=151131211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 151131212 . A . PASS END=151131238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,438:0,42,255:19,0 chr1 151131239 . G . PASS END=151131242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 151131243 . C . PASS END=151131244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 151131245 . C . PASS END=151131292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,825:0,66,255:24,0 chr1 151131293 . T . PASS END=151131293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 151131294 . G . PASS END=151131365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,884:0,66,255:24,0 chr1 151131366 . A . PASS END=151131366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151131367 . A . PASS END=151131367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:17,0 chr1 151131368 . A . PASS END=151131376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 151131377 . C . PASS END=151131378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151131379 . A . PASS END=151131379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 151131380 . G . PASS END=151131383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151131384 . G . PASS END=151131424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,643:0,51,255:19,0 chr1 151131425 . G . PASS END=151131434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 151131435 . A . PASS END=151131486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 151131487 . G . PASS END=151131491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,557:0,32,255:13,0 chr1 151131492 . G . PASS END=151131502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 151131503 . C . PASS END=151131503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151131504 . T . PASS END=151131513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr1 151131514 . C . PASS END=151131518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151131519 . C . PASS END=151131522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 151131523 . C . PASS END=151131524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 151131525 . G . PASS END=151131528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 151131529 . T . PASS END=151131529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151131530 . G . PASS END=151131530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 151131531 . C . PASS END=151131531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 151131532 . T . PASS END=151131532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151131533 . G . PASS END=151131533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 151131534 . A . PASS END=151131534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151131535 . C . PASS END=151131536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 151131537 . G . PASS END=151131537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 151131538 . A . PASS END=151131540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151131541 . G . PASS END=151131542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 151131543 . C . PASS END=151131551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 151131552 . C . PASS END=151131585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr1 151131586 . A . PASS END=151131586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151131587 . G . PASS END=151131587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 151131588 . T . PASS END=151131683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,776:0,61,255:26,0 chr1 151131684 . A . PASS END=151131684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 151131685 . T . PASS END=151131686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 151131687 . T . PASS END=151131688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 151131689 . T . PASS END=151131692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 151131693 . G . PASS END=151131704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 151131705 . C . PASS END=151131705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 151131706 . T . PASS END=151131709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 151131710 . A . PASS END=151131710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 151131711 . G . PASS END=151131727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:18,0 chr1 151131728 . A . PASS END=151131728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 151133358 . T . PASS END=151133384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,560:0,44,255:19,0 chr1 151133385 . G . PASS END=151133401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:25,0 chr1 151133402 . T . PASS END=151133402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 151133403 . C . PASS END=151133429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 151133430 . A . PASS END=151133449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 151133450 . G . PASS END=151133451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 151133452 . A . PASS END=151133461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:27,0 chr1 151133462 . A . PASS END=151133496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 151134212 . C . PASS END=151134232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:22,0 chr1 151134233 . T . PASS END=151134233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr1 151134234 . T . PASS END=151134236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 151134237 . G . PASS END=151134237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 151134238 . A . PASS END=151134240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 151134241 . A . PASS END=151134241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 151134242 . G . PASS END=151134242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 151134243 . C . PASS END=151134243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 151134244 . A . PASS END=151134247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 151134248 . T . PASS END=151134260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1150:0,85,255:33,0 chr1 151134261 . T . PASS END=151134261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:32,0 chr1 151134262 . G . PASS END=151134263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1324:0,92,255:33,0 chr1 151134264 . T . PASS END=151134264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr1 151134265 . C . PASS END=151134267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr1 151134268 . T . PASS END=151134268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:32,0 chr1 151134269 . G . PASS END=151134324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:33:0,92,1173:0,92,255:40,0 chr1 151134325 . T . PASS END=151134361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,113,1521:0,113,255:40,0 chr1 151134362 . C T, 50.00 PASS DP=51;MQ=249.98;MQRankSum=5.971;ReadPosRankSum=1.592;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,31,0:0.608,0.000:51:12,18,0:8,13,0:46:85,0,46,1109,658,1766:255,0,255:19,0:5.0000e+01,1.0070e-04,4.8801e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,5,14,17:11,9,17,14 chr1 151134363 . G . PASS END=151134399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,120,255:40,0 chr1 151134400 . G . PASS END=151134536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:89:35:0,89,1279:0,89,255:40,0 chr1 151134537 . C . PASS END=151134552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,89,255:32,0 chr1 151134553 . G . PASS END=151134556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,86,255:26,0 chr1 151134557 . G . PASS END=151134559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 151134560 . C . PASS END=151134562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 151134563 . T . PASS END=151134576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 151137555 . C . PASS END=151137574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:15:0,44,537:0,44,255:19,0 chr1 151137575 . C . PASS END=151137576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 151137577 . A . PASS END=151137577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 151137578 . G . PASS END=151137580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 151137581 . C . PASS END=151137590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 151137591 . G . PASS END=151137605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:25,0 chr1 151137606 . C . PASS END=151137607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 151137608 . G . PASS END=151137635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 151137636 . G . PASS END=151137665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1117:0,84,255:31,0 chr1 151137666 . T . PASS END=151137666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 151137667 . G . PASS END=151137668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 151137669 . A . PASS END=151137669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 151137670 . C . PASS END=151137679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1172:0,90,255:31,0 chr1 151137680 . T . PASS END=151137708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 151137709 . G . PASS END=151137732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,543:0,45,255:18,0 chr1 151137733 . A . PASS END=151137734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 151138223 . C . PASS END=151138258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1291:0,92,255:39,0 chr1 151138629 . A . PASS END=151138679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:94:45:0,94,1570:0,94,255:40,0 chr1 151138947 . A . PASS END=151139017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,116,1568:0,116,255:40,0 chr1 151139410 . C . PASS END=151139480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1094:0,80,255:32,0 chr1 151139481 . G . PASS END=151139481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 151139482 . C . PASS END=151139494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:32,0 chr1 151139495 . T . PASS END=151139495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:30,0 chr1 151139496 . C . PASS END=151139498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr1 151139597 . G . PASS END=151139694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:65:0,120,1800:0,178,255:40,0 chr1 151139802 . G . PASS END=151139881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,988:0,84,255:40,0 chr1 151139882 . G . PASS END=151139890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 151140620 . A . PASS END=151140627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 151140628 . C . PASS END=151140637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,803:0,66,255:23,0 chr1 151140638 . C . PASS END=151140638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 151140639 . T . PASS END=151140645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,868:0,72,255:25,0 chr1 151140646 . C . PASS END=151140647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 151140648 . C . PASS END=151140652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1053:0,71,255:26,0 chr1 151140653 . C . PASS END=151140669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 151140670 . A . PASS END=151140670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151140671 . G . PASS END=151140674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151140675 . A . PASS END=151140676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 151140677 . A . PASS END=151140677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,759:0,53,255:23,0 chr1 151140678 . C . PASS END=151140703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 151140704 . A . PASS END=151140772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1086:0,84,255:34,0 chr1 151140773 . C . PASS END=151140773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 151140774 . A . PASS END=151140778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 151140779 . A . PASS END=151140801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,908:0,61,255:26,0 chr1 151140802 . T . PASS END=151140802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 151140803 . C . PASS END=151140803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151140804 . A . PASS END=151140804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:22,0 chr1 151140805 . C . PASS END=151140808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 151140809 . T . PASS END=151140810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 151140811 . G . PASS END=151140814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 151141462 . C . PASS END=151141547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:36:0,82,1305:0,82,255:40,0 chr1 151141548 . T . PASS END=151141551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 151141552 . C . PASS END=151141553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 151141554 . T . PASS END=151141561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,71,255:26,0 chr1 151142532 . C . PASS END=151142579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,143,255:40,0 chr1 151142995 . G . PASS END=151142995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 151142996 . T . PASS END=151142996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,877:0,42,255:25,0 chr1 151142997 . A . PASS END=151143004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 151143005 . G . PASS END=151143006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151143007 . T . PASS END=151143008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 151143009 . C . PASS END=151143126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1025:0,80,255:40,0 chr1 151143127 . C . PASS END=151143139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 151143396 . C . PASS END=151143539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1178:0,81,255:40,0 chr1 151143909 . A . PASS END=151144016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,120,1800:0,124,255:40,0 chr1 151144109 . C . PASS END=151144227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,108,1620:0,115,255:40,0 chr1 151144228 . G . PASS END=151144230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:78:43:0,78,1170:0,129,255:26,0 chr1 151144231 . G . PASS END=151144239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:39:0,81,1215:0,117,255:29,0 chr1 151144744 . T . PASS END=151144833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:38:0,98,1341:0,98,255:40,0 chr1 151145975 . C . PASS END=151146091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1286:0,92,255:40,0 chr1 151146867 . C . PASS END=151146895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:19,0 chr1 151146896 . T . PASS END=151146917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:24,0 chr1 151146918 . G . PASS END=151146919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 151146920 . G . PASS END=151146936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr1 151146937 . C . PASS END=151146948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,804:0,80,255:27,0 chr1 151146949 . C . PASS END=151146973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr1 151146974 . C . PASS END=151146974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 151146975 . T . PASS END=151146978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151146979 . C . PASS END=151146985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 151146986 . T . PASS END=151146993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 151146994 . T . PASS END=151146995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151146996 . G . PASS END=151146996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151146997 . T . PASS END=151147007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 151147008 . C . PASS END=151147009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151147010 . G . PASS END=151147023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,712:0,44,255:19,0 chr1 151147229 . C . PASS END=151147341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:34:0,83,1265:0,83,255:40,0 chr1 151147342 . A . PASS END=151147342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 151147343 . T . PASS END=151147351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:33,0 chr1 151149120 . T . PASS END=151149145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 151149146 . A . PASS END=151149146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 151149147 . G . PASS END=151149147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 151149148 . G . PASS END=151149159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 151149160 . G . PASS END=151149164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,513:0,48,255:16,0 chr1 151149165 . A . PASS END=151149165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 151149166 . G . PASS END=151149174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:19,0 chr1 151149175 . T . PASS END=151149195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 151149196 . C . PASS END=151149196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 151149197 . C . PASS END=151149220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,784:0,62,255:26,0 chr1 151149221 . G . PASS END=151149239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151149240 . C . PASS END=151149240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 151149241 . T . PASS END=151149241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151149242 . T . PASS END=151149242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 151149243 . C . PASS END=151149248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 151149249 . A . PASS END=151149249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 151149250 . G . PASS END=151149251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151149252 . C . PASS END=151149252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 151149253 . T . PASS END=151149253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151149254 . C . PASS END=151149255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 151149256 . C . PASS END=151149267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,980:0,84,255:28,0 chr1 151149268 . A . PASS END=151149279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 151149280 . G . PASS END=151149291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1080:0,84,255:31,0 chr1 151149292 . A . PASS END=151149320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 151149321 . T . PASS END=151149322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 151149323 . G . PASS END=151149323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151149324 . A . PASS END=151149324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,786:0,41,255:23,0 chr1 151149325 . C . PASS END=151149326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:23,0 chr1 151149327 . A . PASS END=151149327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 151149328 . T . PASS END=151149331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 151149332 . T . PASS END=151149332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 151149333 . C . PASS END=151149350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,799:0,66,255:22,0 chr1 151149351 . A . PASS END=151149365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,53,255:19,0 chr1 151149366 . G . PASS END=151149369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 151149370 . C . PASS END=151149370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151149371 . G . PASS END=151149407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 151149408 . A . PASS END=151149408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 151149409 . C . PASS END=151149417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 151149418 . A . PASS END=151149459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,50,255:19,0 chr1 151149460 . G . PASS END=151149475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 151149476 . T . PASS END=151149492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 151149493 . G . PASS END=151149493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:15,0 chr1 151149494 . G . PASS END=151149504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:16,0 chr1 151149505 . A . PASS END=151149505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 151149506 . G . PASS END=151149508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 151149509 . T . PASS END=151149521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 151149522 . C . PASS END=151149523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 151149524 . A . PASS END=151149527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151149528 . A . PASS END=151149540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:14,0 chr1 151150477 . C . PASS END=151150481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,807:0,66,255:25,0 chr1 151150482 . T . PASS END=151150482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 151150483 . A . PASS END=151150488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 151150489 . A . PASS END=151150489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,710:0,58,255:24,0 chr1 151150490 . C . PASS END=151150497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,826:0,75,255:25,0 chr1 151150498 . T . PASS END=151150503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151150504 . G . PASS END=151150504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 151150505 . G . PASS END=151150505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 151150506 . G . PASS END=151150506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 151150507 . C . PASS END=151150511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 151150512 . C . PASS END=151150520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,925:0,67,255:26,0 chr1 151150521 . A . PASS END=151150521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:23,0 chr1 151150522 . A . PASS END=151150523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 151150524 . T . PASS END=151150524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr1 151150525 . G . PASS END=151150528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:24,0 chr1 151150529 . C . PASS END=151150529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,876:0,34,255:23,0 chr1 151150530 . T . PASS END=151150534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 151150535 . C . PASS END=151150537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151150538 . A . PASS END=151150538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 151150539 . A . PASS END=151150543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151150544 . A . PASS END=151150563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,925:0,67,255:26,0 chr1 151150564 . C . PASS END=151150580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:18:0,44,712:0,44,255:18,0 chr1 151150581 . A . PASS END=151150581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 151150582 . A . PASS END=151150607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,621:0,48,255:17,0 chr1 151150608 . C . PASS END=151150612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 151150613 . C . PASS END=151150619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:12:0,21,315:0,36,255:9,0 chr1 151150620 . C . PASS END=151150621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 151156793 . C . PASS END=151156804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr1 151156805 . A . PASS END=151156805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:21,0 chr1 151156806 . A . PASS END=151156813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,914:0,62,255:25,0 chr1 151156814 . C . PASS END=151156849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1008:0,81,255:37,0 chr1 151156850 . G . PASS END=151156850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:37,0 chr1 151156851 . G . PASS END=151156880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,109,1415:0,109,255:40,0 chr1 151156881 . T . PASS END=151156881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr1 151156882 . C . PASS END=151156938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1150:0,93,255:38,0 chr1 151156939 . T . PASS END=151156950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,74,255:24,0 chr1 151156951 . T . PASS END=151156959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,66,255:18,0 chr1 151156960 . G . PASS END=151156960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:13,0 chr1 151156961 . A . PASS END=151156969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:16,0 chr1 151157982 . T . PASS END=151158069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1190:0,81,255:40,0 chr1 151158070 . T . PASS END=151158070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:31,0 chr1 151158071 . C . PASS END=151158087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1081:0,82,255:32,0 chr1 151158088 . G . PASS END=151158088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr1 151158089 . A . PASS END=151158089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 151158090 . G . PASS END=151158090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:29,0 chr1 151158091 . A . PASS END=151158096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 151158274 . C . PASS END=151158414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1215:0,83,255:40,0 chr1 151158415 . A . PASS END=151158419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,82,255:26,0 chr1 151158420 . C . PASS END=151158421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 151158422 . G . PASS END=151158426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1041:0,76,255:26,0 chr1 151162481 . C . PASS END=151162482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 151162483 . C . PASS END=151162485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 151162486 . T . PASS END=151162486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 151162487 . G . PASS END=151162502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr1 151162503 . G . PASS END=151162503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 151162504 . T . PASS END=151162509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 151162510 . A . PASS END=151162510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:25,0 chr1 151162511 . G . PASS END=151162513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:77:26:0,77,822:0,77,255:26,0 chr1 151162514 . C . PASS END=151162515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:28,0 chr1 151162516 . C . PASS END=151162565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:27,0 chr1 151162566 . T . PASS END=151162597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 151170494 . A . PASS END=151170593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:54:0,120,1800:0,149,255:40,0 chr1 151171473 . A . PASS END=151171475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 151171476 . G . PASS END=151171519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,770:0,63,255:26,0 chr1 151171520 . C . PASS END=151171534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 151171535 . C . PASS END=151171537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 151171538 . T . PASS END=151171546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 151171547 . C . PASS END=151171547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:29,0 chr1 151171548 . T . PASS END=151171557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1148:0,93,255:31,0 chr1 151171603 . A . PASS END=151171663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:36:0,94,1236:0,94,255:40,0 chr1 151188438 . G . PASS END=151188476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,106,1745:0,106,255:40,0 chr1 151196721 . C . PASS END=151196755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:66:0,120,1800:0,180,255:40,0 chr1 151196847 . G . PASS END=151196882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,124,255:40,0 chr1 151199796 . G . PASS END=151199876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,101,1418:0,101,255:40,0 chr1 151204147 . A . PASS END=151204153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:19,0 chr1 151204154 . C . PASS END=151204155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 151204156 . T . PASS END=151204156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 151204157 . C . PASS END=151204188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:25,0 chr1 151204189 . A . PASS END=151204227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,83,255:33,0 chr1 151204228 . G . PASS END=151204250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,978:0,78,255:26,0 chr1 151204251 . C . PASS END=151204255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 151204256 . T . PASS END=151204258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 151204259 . A . PASS END=151204277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,653:0,54,255:18,0 chr1 151204724 . T . PASS END=151204725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 151204726 . A . PASS END=151204727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:23,0 chr1 151204728 . G . PASS END=151204743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,74,255:26,0 chr1 151204744 . C . PASS END=151204744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151204745 . T . PASS END=151204745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 151204746 . G . PASS END=151204841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:37,0 chr1 151205027 . T . PASS END=151205179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:35:0,99,1421:0,105,255:40,0 chr1 151206673 . A . PASS END=151206673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151206674 . A . PASS END=151206688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:26,0 chr1 151206689 . C . PASS END=151206689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr1 151206690 . T . PASS END=151206710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,873:0,62,255:26,0 chr1 151206711 . C . PASS END=151206830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1215:0,87,255:40,0 chr1 151206831 . A . PASS END=151206831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1447:0,58,255:40,0 chr1 151206832 . C . PASS END=151206927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1156:0,83,255:40,0 chr1 151206928 . G . PASS END=151206938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,93,255:25,0 chr1 151206939 . C . PASS END=151206939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 151206940 . G . PASS END=151206941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:24,0 chr1 151206942 . T . PASS END=151206951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:25:0,42,630:0,44,255:16,0 chr1 151206952 . A . PASS END=151206953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,789:0,39,255:16,0 chr1 151206954 . C . PASS END=151206957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr1 151206958 . C . PASS END=151206959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 151206960 . G . PASS END=151206960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:12,0 chr1 151206961 . C . PASS END=151206965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,511:0,31,255:13,0 chr1 151206966 . C . PASS END=151206966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 151206967 . T . PASS END=151206970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 151206971 . T . PASS END=151206971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 151206972 . G . PASS END=151206972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 151209034 . G . PASS END=151209044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:12,0 chr1 151209045 . C . PASS END=151209045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,457:0,11,255:11,0 chr1 151209046 . T . PASS END=151209047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 151209048 . C . PASS END=151209048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 151209049 . A . PASS END=151209052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 151209053 . T . PASS END=151209053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 151209054 . A . PASS END=151209057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151209058 . G . PASS END=151209059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151209060 . T . PASS END=151209060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 151209061 . T . PASS END=151209062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151209063 . C . PASS END=151209063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 151209064 . A . PASS END=151209074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:16,0 chr1 151209075 . G . PASS END=151209075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 151209076 . T . PASS END=151209089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:19,0 chr1 151209090 . A . PASS END=151209091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,676:0,21,255:20,0 chr1 151209092 . A . PASS END=151209092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 151209093 . T . PASS END=151209102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,754:0,66,255:24,0 chr1 151209103 . C . PASS END=151209103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 151209104 . G . PASS END=151209116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,781:0,72,255:26,0 chr1 151209117 . C . PASS END=151209185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:31,0 chr1 151209186 . G . PASS END=151209186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr1 151209187 . G . PASS END=151209208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 151209209 . G . PASS END=151209223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:25,0 chr1 151209224 . T . PASS END=151209224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 151209225 . G . PASS END=151209231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 151209232 . G . PASS END=151209239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 151210658 . T . PASS END=151210731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1111:0,89,255:37,0 chr1 151210732 . A . PASS END=151210741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,83,255:25,0 chr1 151211606 . G . PASS END=151211606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1296:0,102,255:34,0 chr1 151211607 . T . PASS END=151211607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1050:0,69,255:32,0 chr1 151211608 . T . PASS END=151211640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1327:0,96,255:36,0 chr1 151211641 . T . PASS END=151211654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:25,0 chr1 151212431 . G . PASS END=151212436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,620:0,48,255:19,0 chr1 151212437 . G . PASS END=151212445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 151212446 . C . PASS END=151212446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 151212447 . A . PASS END=151212452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151212453 . C . PASS END=151212453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 151212454 . A . PASS END=151212461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,798:0,63,255:25,0 chr1 151212462 . A . PASS END=151212463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151212464 . G . PASS END=151212466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151212467 . G . PASS END=151212475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 151212476 . C . PASS END=151212476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 151212477 . A . PASS END=151212486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1019:0,87,255:29,0 chr1 151212487 . G . PASS END=151212487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 151212488 . T . PASS END=151212493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 151212494 . A . PASS END=151212494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 151212495 . C . PASS END=151212498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 151212499 . A . PASS END=151212499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 151212500 . T . PASS END=151212500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 151212501 . T . PASS END=151212501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 151212502 . T . PASS END=151212511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 151212512 . C . PASS END=151212515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,994:0,70,255:28,0 chr1 151214599 . T . PASS END=151214602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:19,0 chr1 151214603 . G . PASS END=151214606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 151214607 . T . PASS END=151214607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:20,0 chr1 151214608 . C . PASS END=151214639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,667:0,63,255:23,0 chr1 151214640 . T . PASS END=151214640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 151214641 . T . PASS END=151214641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:20,0 chr1 151214642 . C . PASS END=151214642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 151214643 . T . PASS END=151214643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 151214644 . C . PASS END=151214647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 151214648 . G . PASS END=151214712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,564:0,47,255:19,0 chr1 151214713 . C . PASS END=151214718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 151214719 . T . PASS END=151214719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 151214720 . G . PASS END=151214721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151214722 . C . PASS END=151214745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:17,0 chr1 151214914 . G . PASS END=151214928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:16:0,45,675:0,47,255:19,0 chr1 151214929 . G . PASS END=151214968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,779:0,63,255:26,0 chr1 151214969 . C . PASS END=151214969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151214970 . A . PASS END=151214981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 151214982 . C . PASS END=151215000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 151215001 . T . PASS END=151215001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:25,0 chr1 151215002 . C . PASS END=151215012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:25,0 chr1 151215013 . T . PASS END=151215013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,750:0,58,255:21,0 chr1 151215014 . T . PASS END=151215018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 151215019 . A . PASS END=151215019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,783:0,55,255:19,0 chr1 151215020 . G . PASS END=151215034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,726:0,66,255:22,0 chr1 151215035 . A . PASS END=151215043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 151219396 . T . PASS END=151219441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,135,255:40,0 chr1 151220339 . T . PASS END=151220416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,109,1452:0,109,255:40,0 chr1 151220417 . A . PASS END=151220417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1369:0,74,255:36,0 chr1 151220418 . T . PASS END=151220423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1457:0,104,255:38,0 chr1 151227259 . A . PASS END=151227276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1055:0,82,255:32,0 chr1 151227277 . A . PASS END=151227277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1170:0,61,255:30,0 chr1 151227278 . T . PASS END=151227284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1233:0,99,255:33,0 chr1 151234637 . T . PASS END=151234637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:18,0 chr1 151234638 . G . PASS END=151234647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 151234648 . G . PASS END=151234648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:22,0 chr1 151234649 . T . PASS END=151234649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 151234650 . G . PASS END=151234661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,862:0,61,255:26,0 chr1 151234662 . A . PASS END=151234716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,926:0,81,255:33,0 chr1 151234717 . T . PASS END=151234717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,967:0,54,255:31,0 chr1 151234718 . T . PASS END=151234738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1210:0,86,255:34,0 chr1 151234739 . C . PASS END=151234739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:28,0 chr1 151234740 . A . PASS END=151234755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1111:0,82,255:29,0 chr1 151234756 . T . PASS END=151234756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 151234757 . G . PASS END=151234761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 151234762 . T . PASS END=151234762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 151234763 . T . PASS END=151234765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151234766 . C . PASS END=151234777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 151236390 . T . PASS END=151236400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1101:0,87,255:31,0 chr1 151236401 . T . PASS END=151236401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 151236402 . G . PASS END=151236503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1127:0,80,255:39,0 chr1 151236504 . T . PASS END=151236504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 151237308 . C . PASS END=151237394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:53:0,120,1800:0,135,255:40,0 chr1 151237642 . C . PASS END=151237710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,181,255:40,0 chr1 151237870 . G . PASS END=151237883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1208:0,83,255:33,0 chr1 151237884 . A . PASS END=151237884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:32,0 chr1 151237885 . A . PASS END=151237891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1160:0,99,255:33,0 chr1 151237892 . C . PASS END=151237892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:32,0 chr1 151237893 . A . PASS END=151237931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:33:0,89,1136:0,89,255:37,0 chr1 151237932 . T . PASS END=151237932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:35,0 chr1 151237933 . T . PASS END=151237937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1205:0,94,255:36,0 chr1 151237938 . T . PASS END=151237938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:34,0 chr1 151237939 . C . PASS END=151238055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:32:0,82,1133:0,82,255:40,0 chr1 151238056 . G . PASS END=151238060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:25,0 chr1 151238061 . C . PASS END=151238061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:22,0 chr1 151238062 . A . PASS END=151238082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 151238083 . T . PASS END=151238083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,711:0,50,255:20,0 chr1 151238084 . T . PASS END=151238085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 151238480 . G . PASS END=151238482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,692:0,21,255:19,0 chr1 151238483 . C . PASS END=151238483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151238484 . T . PASS END=151238489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:19,0 chr1 151238490 . T . PASS END=151238490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 151238491 . A . PASS END=151238492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 151238493 . C . PASS END=151238493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,759:0,14,255:21,0 chr1 151238494 . T . PASS END=151238496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:30:23:0,30,770:0,30,255:24,0 chr1 151238497 . G . PASS END=151238498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 151238499 . A . PASS END=151238499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 151238500 . A . PASS END=151238500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 151238501 . G . PASS END=151238501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 151238502 . A . PASS END=151238503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr1 151238504 . C . PASS END=151238504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,869:0,26,255:25,0 chr1 151238505 . A . PASS END=151238505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:26,0 chr1 151238506 . G . PASS END=151238506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 151238507 . C . PASS END=151238513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:26,0 chr1 151238514 . G . PASS END=151238514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151238515 . G . PASS END=151238515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 151238516 . C . PASS END=151238516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1049:0,62,255:29,0 chr1 151238517 . A . PASS END=151238517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:30,0 chr1 151238518 . G . PASS END=151238519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 151238520 . A . PASS END=151238520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:19:32:0,19,1041:0,19,255:29,0 chr1 151238521 . G . PASS END=151238521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr1 151238522 . G . PASS END=151238522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 151238523 . A . PASS END=151238523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 151238524 . G . PASS END=151238524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:31,0 chr1 151238525 . G . PASS END=151238525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1241:0,99,255:33,0 chr1 151238526 . A . PASS END=151238526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 151238527 . G . PASS END=151238527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1111:0,47,255:31,0 chr1 151238528 . G . PASS END=151238533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:32,0 chr1 151238534 . C . PASS END=151238534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 151238535 . G . PASS END=151238535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:31,0 chr1 151238536 . G . PASS END=151238538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1172:0,61,255:34,0 chr1 151238539 . A . PASS END=151238540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1296:0,105,255:35,0 chr1 151238541 . C . PASS END=151238541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 151238542 . T . PASS END=151238542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1119:0,28,255:33,0 chr1 151238543 . G . PASS END=151238632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1236:0,92,255:40,0 chr1 151238784 . A . PASS END=151238897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1305:0,81,255:40,0 chr1 151238898 . T . PASS END=151238915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:26,0 chr1 151238996 . A . PASS END=151239063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,99,1369:0,101,255:40,0 chr1 151239416 . A . PASS END=151239454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:48:0,120,1800:0,144,255:40,0 chr1 151239649 . G . PASS END=151239668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:18,0 chr1 151239669 . G . PASS END=151239669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 151239670 . A . PASS END=151239671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 151239672 . G . PASS END=151239684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,711:0,60,255:22,0 chr1 151239685 . T . PASS END=151239685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 151239686 . T . PASS END=151239696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,911:0,69,255:26,0 chr1 151239697 . G . PASS END=151239697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151239698 . T . PASS END=151239701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 151239702 . A . PASS END=151239705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151239706 . A . PASS END=151239709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1008:0,71,255:26,0 chr1 151239710 . T . PASS END=151239713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151239714 . A . PASS END=151239715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151239716 . G . PASS END=151239729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 151239730 . A . PASS END=151239730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 151239731 . A . PASS END=151239731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151239732 . T . PASS END=151239732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 151239733 . G . PASS END=151239739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151239740 . T . PASS END=151239740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,894:0,54,255:26,0 chr1 151239741 . T . PASS END=151239742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151239743 . G . PASS END=151239744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 151239745 . A . PASS END=151239747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151239748 . G . PASS END=151239759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:27,0 chr1 151239760 . C . PASS END=151239765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151239766 . T . PASS END=151239786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 151239787 . A . PASS END=151239787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:20,0 chr1 151239788 . A . PASS END=151239790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,945:0,62,255:22,0 chr1 151239791 . A . PASS END=151239791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 151239792 . G . PASS END=151239800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 151239801 . G . PASS END=151239801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,833:0,44,255:23,0 chr1 151239802 . G . PASS END=151239806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 151239807 . A . PASS END=151239807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 151239808 . G . PASS END=151239809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151239810 . C . PASS END=151239819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:20:0,50,751:0,50,255:19,0 chr1 151254546 . A . PASS END=151254555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 151258751 . G . PASS END=151258931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1335:0,95,255:40,0 chr1 151258932 . A . PASS END=151258932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:29,0 chr1 151258933 . G . PASS END=151258948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:32:0,83,1202:0,83,255:33,0 chr1 151258949 . A . PASS END=151258949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 151258950 . T . PASS END=151258969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1263:0,86,255:32,0 chr1 151258970 . A . PASS END=151258970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:29,0 chr1 151258971 . G . PASS END=151258989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1233:0,86,255:32,0 chr1 151258990 . C . PASS END=151258990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 151258991 . C . PASS END=151259000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 151259001 . C . PASS END=151259031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:25,0 chr1 151259032 . A . PASS END=151259032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 151259033 . C . PASS END=151259035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 151259036 . T . PASS END=151259089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr1 151259090 . A . PASS END=151259092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 151259093 . C . PASS END=151259106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 151259107 . A . PASS END=151259111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151259112 . A . PASS END=151259123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:10:0,27,405:0,30,255:9,0 chr1 151259124 . G . PASS END=151259141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 151259142 . T . PASS END=151259142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 151259143 . G . PASS END=151259144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 151259145 . T . LowGQ END=151259146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:11,0 chr1 151259147 . T . PASS END=151259188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 151259189 . C . PASS END=151259190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 151259191 . G . PASS END=151259191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 151259192 . C . PASS END=151259207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 151259208 . C . PASS END=151259208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 151259209 . A . PASS END=151259229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 151259230 . G . PASS END=151259230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 151259231 . A . PASS END=151259237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 151259238 . A . PASS END=151259244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151259245 . T . PASS END=151259246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 151259247 . G . PASS END=151259250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 151259251 . C . PASS END=151259251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 151259252 . T . PASS END=151259279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 151259280 . G . PASS END=151259281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 151259282 . A . PASS END=151259284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151259285 . A . PASS END=151259294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 151259295 . G . PASS END=151259300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151259301 . T . PASS END=151259301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr1 151259302 . C . PASS END=151259312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 151259313 . C . PASS END=151259313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 151259314 . T . PASS END=151259321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 151259322 . T . PASS END=151259331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:23:11:0,23,405:0,23,255:9,0 chr1 151259332 . G . PASS END=151259345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:11,0 chr1 151259346 . T . PASS END=151259346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 151259347 . C . PASS END=151259348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 151259349 . T . PASS END=151259349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 151259350 . T . PASS END=151259361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr1 151259362 . T . PASS END=151259362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,342:0,22,255:12,0 chr1 151259363 . T . PASS END=151259379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 151259380 . A . PASS END=151259380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 151259381 . A . PASS END=151259381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 151259382 . T . PASS END=151259439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,282:0,24,255:9,0 chr1 151259440 . A . PASS END=151259440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 151259441 . G . PASS END=151259484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 151259485 . G . PASS END=151259490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 151259491 . A . PASS END=151259519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 151259520 . T . PASS END=151259537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 151259538 . T . PASS END=151259538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:10,0 chr1 151259539 . G . PASS END=151259548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 151259549 . C . PASS END=151259561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 151259562 . G . PASS END=151259571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 151259572 . C . PASS END=151259582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 151259583 . T . PASS END=151259583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 151259584 . C . PASS END=151259588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 151259589 . C . PASS END=151259590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151259591 . C . PASS END=151259605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr1 151259606 . T . PASS END=151259606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 151259607 . C . PASS END=151259630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:46:17:0,46,607:0,46,255:19,0 chr1 151259631 . T . PASS END=151259648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,748:0,63,255:22,0 chr1 151259649 . G . PASS END=151259649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr1 151259650 . G . PASS END=151259675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 151259676 . G . PASS END=151259678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 151259679 . T . PASS END=151259684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 151259685 . T . PASS END=151259685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 151259686 . A . PASS END=151259693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 151259694 . C . PASS END=151259694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 151259695 . G . PASS END=151259695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151259696 . A . PASS END=151259696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 151259697 . G . PASS END=151259700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,695:0,63,255:21,0 chr1 151259701 . G . PASS END=151259716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:18:0,49,753:0,49,255:18,0 chr1 151259717 . A . PASS END=151259718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 151259719 . G . PASS END=151259719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 151259720 . A . PASS END=151259720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 151259721 . C . PASS END=151259727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,548:0,51,255:17,0 chr1 151259728 . G . PASS END=151259728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 151259729 . C . PASS END=151259733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 151259734 . A . PASS END=151259734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 151259735 . G . PASS END=151259735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 151259736 . C . PASS END=151259736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 151259737 . T . PASS END=151259755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr1 151259756 . T . PASS END=151259756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151259757 . G . PASS END=151259777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:17:0,47,705:0,47,255:19,0 chr1 151259778 . A . PASS END=151259778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 151259779 . T . PASS END=151259796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:17,0 chr1 151259797 . A . PASS END=151259797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 151259798 . G . PASS END=151259825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,629:0,40,255:19,0 chr1 151259826 . T . PASS END=151259828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 151259829 . T . PASS END=151259840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 151259841 . C . PASS END=151259841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 151259842 . T . PASS END=151259843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,644:0,43,255:19,0 chr1 151259844 . G . PASS END=151259848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151259849 . A . PASS END=151259849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 151259850 . G . PASS END=151259874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 151259875 . C . PASS END=151259875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 151259876 . T . PASS END=151259886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:24,0 chr1 151259887 . T . PASS END=151259887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 151259888 . C . PASS END=151259888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 151259889 . C . PASS END=151259889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 151259890 . C . PASS END=151259923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,899:0,69,255:25,0 chr1 151259924 . T . PASS END=151259924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 151259925 . G . PASS END=151259926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 151259927 . G . PASS END=151259931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 151259932 . C . PASS END=151259933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 151259934 . G . PASS END=151259935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151259936 . T . PASS END=151259936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 151259937 . G . PASS END=151259961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:30,0 chr1 151259962 . A . PASS END=151259962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 151259963 . C . PASS END=151259981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 151259982 . C . PASS END=151259983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 151259984 . T . PASS END=151259988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151259989 . A . PASS END=151260013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,886:0,72,255:26,0 chr1 151260014 . C . PASS END=151260014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 151260015 . A . PASS END=151260018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,931:0,75,255:25,0 chr1 151260019 . A . PASS END=151260019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:22,0 chr1 151260020 . G . PASS END=151260055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,886:0,65,255:25,0 chr1 151260056 . C . PASS END=151260056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 151260057 . T . PASS END=151260060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 151260061 . A . PASS END=151260061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 151260062 . C . PASS END=151260062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 151260063 . C . PASS END=151260064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 151260065 . G . PASS END=151260066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 151260067 . C . PASS END=151260083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,737:0,50,255:19,0 chr1 151260084 . G . PASS END=151260085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 151260086 . A . PASS END=151260094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 151260095 . G . PASS END=151260095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 151260096 . C . PASS END=151260096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 151260097 . C . PASS END=151260100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 151260101 . T . PASS END=151260101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 151260102 . G . PASS END=151260105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 151260106 . C . PASS END=151260106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 151260107 . A . PASS END=151260113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 151260114 . G . PASS END=151260118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151260119 . A . PASS END=151260126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:26,0 chr1 151260127 . G . PASS END=151260138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr1 151260139 . C . PASS END=151260139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 151260140 . T . PASS END=151260164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 151260165 . T . PASS END=151260183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:25,0 chr1 151260184 . G . PASS END=151260184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 151260185 . T . PASS END=151260200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,791:0,66,255:22,0 chr1 151260201 . A . PASS END=151260201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 151260202 . G . PASS END=151260206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 151260207 . T . PASS END=151260208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 151260209 . G . PASS END=151260211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 151260212 . C . PASS END=151260212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 151260213 . A . PASS END=151260223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:22,0 chr1 151260224 . G . PASS END=151260225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:21,0 chr1 151260226 . G . PASS END=151260227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 151260228 . C . PASS END=151260228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:20,0 chr1 151260229 . A . PASS END=151260230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 151260231 . A . PASS END=151260231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 151260232 . G . PASS END=151260232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 151260233 . T . PASS END=151260233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 151260234 . G . PASS END=151260234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 151260235 . A . PASS END=151260235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,756:0,33,255:20,0 chr1 151260236 . T . PASS END=151260238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 151260239 . C . PASS END=151260239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 151260240 . A . PASS END=151260240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:20,0 chr1 151260241 . C . PASS END=151260246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151260247 . C . PASS END=151260266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:17:0,46,637:0,46,255:17,0 chr1 151260267 . C . PASS END=151260269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 151260270 . C . PASS END=151260274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 151260275 . A . PASS END=151260277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 151260278 . T . PASS END=151260280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151260281 . T . PASS END=151260281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 151260282 . C . PASS END=151260282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151260283 . A . PASS END=151260292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 151260293 . A . PASS END=151260293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 151260294 . C . PASS END=151260305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:15,0 chr1 151260306 . C . PASS END=151260306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 151260307 . T . PASS END=151260316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:17,0 chr1 151260317 . A . PASS END=151260317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 151260318 . C . PASS END=151260319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 151260320 . T . PASS END=151260320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 151260321 . G . PASS END=151260332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr1 151260333 . T . PASS END=151260333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 151260334 . G . PASS END=151260347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 151260348 . C . PASS END=151260348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 151260349 . C . PASS END=151260352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 151260353 . C . PASS END=151260353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 151260354 . T . PASS END=151260357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151260358 . A . PASS END=151260358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 151260359 . C . PASS END=151260441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,613:0,41,255:19,0 chr1 151260442 . A . PASS END=151260451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 151260452 . C . PASS END=151260507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,590:0,43,255:19,0 chr1 151260508 . C . PASS END=151260511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr1 151260512 . C . PASS END=151260522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 151260523 . A . PASS END=151260525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151260526 . G . PASS END=151260535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:15,0 chr1 151260536 . T . PASS END=151260537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 151260538 . G . PASS END=151260542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 151260543 . G . PASS END=151260568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,480:0,39,255:13,0 chr1 151260569 . C . PASS END=151260576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151260577 . C . PASS END=151260619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 151260620 . C . PASS END=151260631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 151260632 . C . PASS END=151260637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 151260638 . T . PASS END=151260638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 151260639 . C . PASS END=151260701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,413:0,33,255:13,0 chr1 151260702 . T . PASS END=151260708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 151260709 . G . PASS END=151260714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 151260715 . G . PASS END=151260725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 151260726 . T . PASS END=151260726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 151260727 . G . PASS END=151260799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,576:0,41,255:19,0 chr1 151260800 . G . PASS END=151260802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151260803 . A . PASS END=151260848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,657:0,41,255:19,0 chr1 151260849 . G . PASS END=151260849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 151260850 . C . PASS END=151260854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr1 151260855 . C . PASS END=151260855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 151260856 . C . PASS END=151260866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 151260867 . T . PASS END=151260867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr1 151260868 . G . PASS END=151260882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 151261004 . G . PASS END=151261032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,662:0,41,255:19,0 chr1 151261033 . C . PASS END=151261045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 151261046 . T . PASS END=151261046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,576:0,27,255:18,0 chr1 151261047 . T . PASS END=151261047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 151261048 . C . PASS END=151261048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:16,0 chr1 151261049 . A . PASS END=151261066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,759:0,47,255:19,0 chr1 151261067 . C . PASS END=151261086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr1 151261087 . T . PASS END=151261087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 151261088 . G . PASS END=151261090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 151261091 . T . PASS END=151261091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 151261092 . G . PASS END=151261149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,862:0,66,255:24,0 chr1 151261150 . C . PASS END=151261157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr1 151261158 . A . PASS END=151261158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:39:22:0,39,585:0,50,255:12,0 chr1 151261159 . C . PASS END=151261167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr1 151261168 . C . PASS END=151261172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:15:0,36,540:0,45,255:13,0 chr1 151261173 . T . PASS END=151261176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:14:0,27,405:0,42,255:9,0 chr1 151261177 . A . PASS END=151261182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 151261571 . G . PASS END=151261571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 151261572 . T . PASS END=151261580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr1 151261581 . T . PASS END=151261581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:20,0 chr1 151261582 . G . PASS END=151261587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 151261588 . T . PASS END=151261588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 151261589 . G . PASS END=151261591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr1 151261592 . G . PASS END=151261592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 151261593 . T . PASS END=151261594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,864:0,42,255:26,0 chr1 151261595 . T . PASS END=151261595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 151261596 . G . PASS END=151261598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 151261599 . G . PASS END=151261599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151261600 . G . PASS END=151261601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:27,0 chr1 151261602 . G . PASS END=151261603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151261604 . G . PASS END=151261604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 151261605 . A . PASS END=151261608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:28,0 chr1 151261609 . C . PASS END=151261609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 151261610 . C . PASS END=151261614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 151261615 . A . PASS END=151261617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr1 151261618 . C . PASS END=151261618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151261619 . C . PASS END=151261619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 151261620 . C . PASS END=151261624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 151261625 . C . PASS END=151261625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1045:0,46,255:26,0 chr1 151261626 . C . PASS END=151261633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:32,0 chr1 151261634 . G . PASS END=151261634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1103:0,47,255:31,0 chr1 151261635 . C . PASS END=151261636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1164:0,85,255:32,0 chr1 151261637 . C . PASS END=151261638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:33,0 chr1 151261639 . G . PASS END=151261643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:33,0 chr1 151261644 . G . PASS END=151261644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:34,0 chr1 151261645 . T . PASS END=151261645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 151261646 . T . PASS END=151261646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:33,0 chr1 151261647 . T . PASS END=151261647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 151261648 . T . PASS END=151261648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:30,0 chr1 151261649 . C . PASS END=151261663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1208:0,83,255:32,0 chr1 151261664 . C . PASS END=151261664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 151261665 . T . PASS END=151261677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1202:0,83,255:29,0 chr1 151261678 . T . PASS END=151261681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:76:30:0,76,1080:0,76,255:27,0 chr1 151261682 . G . PASS END=151261689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 151261690 . C . PASS END=151261690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 151261691 . A . PASS END=151261711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1097:0,83,255:31,0 chr1 151261712 . C . PASS END=151261717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr1 151261718 . G . PASS END=151261724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151261725 . A . PASS END=151261728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,994:0,70,255:27,0 chr1 151261729 . T . PASS END=151261729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151261730 . C . PASS END=151261730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 151261731 . C . PASS END=151261731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151261732 . A . PASS END=151261747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1045:0,71,255:26,0 chr1 151261854 . G . PASS END=151261874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 151261875 . G . PASS END=151261881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 151261882 . A . PASS END=151261882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 151261883 . C . PASS END=151261892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1218:0,93,255:32,0 chr1 151261893 . T . PASS END=151261893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 151261894 . C . PASS END=151261953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1014:0,82,255:34,0 chr1 151261954 . T . PASS END=151261954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1005:0,79,255:31,0 chr1 151261955 . T . PASS END=151261978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1172:0,83,255:32,0 chr1 151261979 . T . PASS END=151261980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:30:0,62,944:0,62,255:29,0 chr1 151261981 . T . PASS END=151261981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:89:30:0,89,900:0,89,255:30,0 chr1 151261982 . T . PASS END=151261982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 151261983 . T . PASS END=151262009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1133:0,87,255:30,0 chr1 151262010 . T . PASS END=151262010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:26,0 chr1 151262011 . C . PASS END=151262012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151262013 . C . PASS END=151262015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 151262016 . G . PASS END=151262016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:23,0 chr1 151262153 . G . PASS END=151262153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 151262154 . A . PASS END=151262157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr1 151262158 . C . PASS END=151262160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 151262161 . A . PASS END=151262162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 151262163 . C . PASS END=151262164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 151262165 . G . PASS END=151262165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 151262166 . T . PASS END=151262168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 151262169 . G . PASS END=151262169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 151262170 . G . PASS END=151262170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 151262171 . G . PASS END=151262173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:16,0 chr1 151262174 . C . PASS END=151262174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 151262175 . T . PASS END=151262175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:13,0 chr1 151262176 . T . PASS END=151262185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 151262186 . T . PASS END=151262186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 151262187 . G . PASS END=151262189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 151262190 . G . PASS END=151262190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 151262191 . G . PASS END=151262194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 151262195 . A . PASS END=151262195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 151262196 . G . PASS END=151262196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 151262197 . G . PASS END=151262197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 151262198 . G . PASS END=151262201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 151262202 . G . PASS END=151262202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 151262203 . G . PASS END=151262206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151262207 . T . PASS END=151262207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 151262208 . G . PASS END=151262222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 151262223 . A . PASS END=151262264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr1 151262265 . G . PASS END=151262266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 151262267 . C . PASS END=151262331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,31,255:13,0 chr1 151262332 . C . PASS END=151262333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151262334 . C . PASS END=151262334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 151262335 . G . PASS END=151262338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 151262339 . A . PASS END=151262339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 151262340 . G . PASS END=151262347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:15,0 chr1 151262348 . G . PASS END=151262348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 151262349 . C . PASS END=151262349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,550:0,45,255:15,0 chr1 151262350 . C . PASS END=151262350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:13,0 chr1 151262351 . T . PASS END=151262351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151262352 . C . PASS END=151262358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:14:0,31,504:0,31,255:13,0 chr1 151262359 . A . PASS END=151262368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 151262369 . C . PASS END=151262369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 151262370 . A . PASS END=151262378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,407:0,42,255:16,0 chr1 151262379 . A . PASS END=151262380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr1 151262381 . G . PASS END=151262386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 151262387 . G . PASS END=151262387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 151262388 . G . PASS END=151262394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 151262395 . G . PASS END=151262395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 151262396 . G . PASS END=151262414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr1 151262415 . G . PASS END=151262435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:24,0 chr1 151262436 . C . PASS END=151262436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 151262437 . C . PASS END=151262478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,878:0,69,255:26,0 chr1 151262479 . G . PASS END=151262479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 151262480 . C . PASS END=151262483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 151262598 . T . PASS END=151262653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1217:0,86,255:37,0 chr1 151262654 . C . PASS END=151262654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:33,0 chr1 151262655 . C . PASS END=151262701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1103:0,80,255:33,0 chr1 151262702 . C . PASS END=151262702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:28,0 chr1 151262703 . C . PASS END=151262710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:29,0 chr1 151262847 . A . PASS END=151262872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,825:0,66,255:26,0 chr1 151262873 . T . PASS END=151262878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 151262879 . T . PASS END=151262879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 151262880 . G . PASS END=151262885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 151262886 . A . PASS END=151262888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 151262889 . C . PASS END=151262902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 151262903 . T . PASS END=151262903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 151262904 . T . PASS END=151262908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:33,0 chr1 151262909 . T . PASS END=151262909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1140:0,72,255:31,0 chr1 151262910 . A . PASS END=151263014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1125:0,80,255:36,0 chr1 151263015 . C . PASS END=151263046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,74,255:26,0 chr1 151263047 . C . PASS END=151263049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 151263176 . T . PASS END=151263196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:24,0 chr1 151263197 . G . PASS END=151263197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:26,0 chr1 151263198 . G . PASS END=151263198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151263199 . T . PASS END=151263199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 151263200 . C . PASS END=151263205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 151263206 . C . PASS END=151263206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 151263207 . G . PASS END=151263210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 151263211 . C . PASS END=151263214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 151263215 . T . PASS END=151263216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 151263217 . T . PASS END=151263217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 151263218 . T . PASS END=151263222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 151263223 . C . PASS END=151263223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 151263224 . T . PASS END=151263226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151263227 . T . PASS END=151263227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 151263228 . G . PASS END=151263228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151263229 . C . PASS END=151263229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr1 151263230 . A . PASS END=151263234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 151263235 . G . PASS END=151263235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 151263236 . G . PASS END=151263242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1202:0,93,255:32,0 chr1 151263243 . A . PASS END=151263243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr1 151263244 . C . PASS END=151263254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1218:0,86,255:33,0 chr1 151263255 . C . PASS END=151263255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:32,0 chr1 151263256 . G . PASS END=151263268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1172:0,85,255:35,0 chr1 151263269 . C . PASS END=151263269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr1 151263270 . C . PASS END=151263271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1280:0,105,255:35,0 chr1 151263272 . A . PASS END=151263272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:32,0 chr1 151263273 . G . PASS END=151263322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1174:0,85,255:35,0 chr1 151263323 . A . PASS END=151263323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:26,0 chr1 151263324 . G . PASS END=151263335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1215:0,83,255:28,0 chr1 151263336 . A . PASS END=151263338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:30:0,75,1125:0,80,255:25,0 chr1 151263339 . G . PASS END=151263342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151263343 . C . PASS END=151263351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:70:28:0,70,992:0,70,255:27,0 chr1 151263352 . G . PASS END=151263361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 151263362 . G . PASS END=151263402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,908:0,61,255:26,0 chr1 151263403 . T . PASS END=151263439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,599:0,51,255:19,0 chr1 151263440 . A . PASS END=151263440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 151263441 . G . PASS END=151263455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 151263456 . G . PASS END=151263461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 151263462 . T . PASS END=151263463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 151263464 . G . PASS END=151263466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:10,0 chr1 151263467 . A . PASS END=151263474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:10:0,27,405:0,30,255:9,0 chr1 151263475 . T . PASS END=151263475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 151263476 . G . PASS END=151263509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 151263510 . C . PASS END=151263516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:10,0 chr1 151263517 . A . PASS END=151263518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151263519 . G . PASS END=151263530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:10,0 chr1 151263531 . A . PASS END=151263547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 151263548 . C . PASS END=151263587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 151263588 . G . LowGQ END=151263588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:11,0 chr1 151263589 . C . PASS END=151263604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,449:0,36,255:12,0 chr1 151263605 . C . PASS END=151263606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151263607 . T . PASS END=151263607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:13,0 chr1 151263608 . C . PASS END=151263621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151263622 . C . PASS END=151263624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151263625 . C . PASS END=151263646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 151263647 . T . PASS END=151263684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 151263685 . G . PASS END=151263685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151265328 . T . PASS END=151265485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:29:0,80,1160:0,80,255:40,0 chr1 151265486 . C . PASS END=151265486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 151265487 . A . PASS END=151265487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151265488 . T . PASS END=151265501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1008:0,68,255:25,0 chr1 151265502 . C . PASS END=151265502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151265503 . T . PASS END=151265503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 151265504 . G . PASS END=151265504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151265505 . A . PASS END=151265509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151265876 . A . PASS END=151265876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151265877 . G . PASS END=151265877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 151265878 . A . PASS END=151265906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,529:0,48,255:16,0 chr1 151265907 . A . LowGQ END=151265907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,543:1,0,255:16,0 chr1 151265908 . G . PASS END=151265908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 151265909 . A . LowGQ END=151265909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,474:1,0,255:16,0 chr1 151265910 . T . PASS END=151265913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 151265914 . G . PASS END=151265914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 151265915 . A . PASS END=151265915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:17,0 chr1 151265916 . T . PASS END=151265916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 151265917 . G . PASS END=151265917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:15,0 chr1 151265918 . A . PASS END=151265919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 151265920 . C . PASS END=151265920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 151265921 . C . PASS END=151265924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 151265925 . G . PASS END=151265926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 151265927 . A . PASS END=151265932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 151265933 . G . PASS END=151265933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:13,0 chr1 151265934 . A . PASS END=151265934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 151265935 . C . PASS END=151265938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 151266423 . T . PASS END=151266430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr1 151266431 . C . PASS END=151266432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151266433 . G . PASS END=151266447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,941:0,65,255:26,0 chr1 151266448 . G . PASS END=151266450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 151266451 . G . PASS END=151266451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:27,0 chr1 151266452 . A . PASS END=151266452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 151266453 . A . PASS END=151266453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr1 151266454 . G . PASS END=151266456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151266457 . T . PASS END=151266458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 151266459 . A . PASS END=151266459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:29,0 chr1 151266460 . G . PASS END=151266463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:32:0,63,1055:0,63,255:25,0 chr1 151266464 . C . PASS END=151266473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:33:0,80,1320:0,80,255:32,0 chr1 151266474 . T . PASS END=151266474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:30,0 chr1 151266475 . G . PASS END=151266506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1155:0,80,255:38,0 chr1 151266507 . C . PASS END=151266507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1426:0,73,255:37,0 chr1 151266508 . T . PASS END=151266614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,99,1427:0,99,255:40,0 chr1 151266885 . A . PASS END=151267017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1235:0,88,255:40,0 chr1 151271284 . C . PASS END=151271285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 151271286 . G . PASS END=151271288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151271289 . C . PASS END=151271289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 151271290 . T . PASS END=151271325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1024:0,80,255:38,0 chr1 151271326 . G . PASS END=151271326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr1 151271327 . C . PASS END=151271549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1126:0,83,255:40,0 chr1 151274320 . C . PASS END=151274443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:33:0,80,1215:0,80,255:40,0 chr1 151274670 . C . PASS END=151274684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,770:0,66,255:24,0 chr1 151274685 . C . PASS END=151274685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,806:0,25,255:21,0 chr1 151274686 . A . PASS END=151274723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:26,0 chr1 151274724 . T . PASS END=151274724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 151274725 . C . PASS END=151274726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151274727 . C . PASS END=151274727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151274728 . G . PASS END=151274728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 151274729 . T . PASS END=151274734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151274735 . G . PASS END=151274735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 151274736 . G . PASS END=151274736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 151274737 . C . PASS END=151274755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,62,255:26,0 chr1 151274756 . C . PASS END=151274774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 151276017 . C . PASS END=151276126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:39:0,91,1344:0,91,255:40,0 chr1 151278612 . C . PASS END=151278620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 151278621 . C . PASS END=151278621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 151278622 . A . PASS END=151278648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,770:0,62,255:26,0 chr1 151278649 . G . PASS END=151278661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,956:0,84,255:29,0 chr1 151278662 . T . PASS END=151278662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1053:0,38,255:27,0 chr1 151278663 . G . PASS END=151278663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151278664 . T . PASS END=151278664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 151278665 . C . PASS END=151278666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151278667 . T . PASS END=151278668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 151278669 . G . PASS END=151278769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1056:0,87,255:35,0 chr1 151278770 . T . PASS END=151278776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr1 151278777 . A . PASS END=151278812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,540:0,44,255:19,0 chr1 151278813 . G . PASS END=151278839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,37,255:13,0 chr1 151280050 . C . PASS END=151280062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:22,0 chr1 151280063 . T . PASS END=151280063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 151280064 . T . PASS END=151280080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,861:0,66,255:26,0 chr1 151280081 . G . PASS END=151280090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1047:0,84,255:32,0 chr1 151280091 . C . PASS END=151280091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 151280092 . A . PASS END=151280239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1153:0,80,255:39,0 chr1 151280240 . G . PASS END=151280250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1078:0,74,255:26,0 chr1 151280251 . T . PASS END=151280251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151280252 . T . PASS END=151280253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,887:0,67,255:25,0 chr1 151280254 . T . PASS END=151280254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,704:0,33,255:21,0 chr1 151280255 . C . PASS END=151280271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:23,0 chr1 151280272 . A . PASS END=151280277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:22:0,42,630:0,50,255:15,0 chr1 151282687 . G . PASS END=151282687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1363:0,95,255:33,0 chr1 151282688 . G . PASS END=151282688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:32,0 chr1 151282689 . A . PASS END=151282690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 151282691 . C . PASS END=151282691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:34,0 chr1 151282692 . T . PASS END=151282692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 151282693 . G . PASS END=151282693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1240:0,59,255:35,0 chr1 151282694 . A . PASS END=151282694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 151282695 . A . PASS END=151282695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr1 151282696 . T . PASS END=151282696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 151282697 . G . PASS END=151282697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1205:0,67,255:35,0 chr1 151282698 . A . PASS END=151282710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:38:0,80,1108:0,80,255:36,0 chr1 151282711 . C . PASS END=151282711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1263:0,64,255:33,0 chr1 151282712 . T . PASS END=151282712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1227:0,91,255:34,0 chr1 151282713 . C . PASS END=151282713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1156:0,39,255:33,0 chr1 151282714 . G . PASS END=151282717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1402:0,98,255:37,0 chr1 151282718 . C . PASS END=151282718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1125:0,61,255:33,0 chr1 151282719 . T . PASS END=151282726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1258:0,94,255:36,0 chr1 151282727 . A . PASS END=151282727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1105:0,60,255:33,0 chr1 151282728 . G . PASS END=151282728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1264:0,92,255:34,0 chr1 151282729 . C . PASS END=151282729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:33,0 chr1 151282730 . T . PASS END=151282731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1250:0,91,255:35,0 chr1 151288049 . C . PASS END=151288049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 151288050 . T . PASS END=151288050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:25,0 chr1 151288051 . C . PASS END=151288062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:28,0 chr1 151288063 . C . PASS END=151288064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 151288065 . A . PASS END=151288067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 151288068 . T . PASS END=151288068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,850:0,56,255:27,0 chr1 151288069 . T . PASS END=151288074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:29,0 chr1 151288075 . T . PASS END=151288076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:28,0 chr1 151288077 . C . PASS END=151288080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 151288081 . C . PASS END=151288082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 151288083 . G . PASS END=151288111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1078:0,83,255:33,0 chr1 151288112 . G . PASS END=151288113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:60:33:0,60,1177:0,60,255:28,0 chr1 151288114 . T . PASS END=151288121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 151288122 . G . PASS END=151288156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,68,255:26,0 chr1 151288157 . G . PASS END=151288157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 151288158 . G . PASS END=151288163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 151288164 . A . PASS END=151288164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 151288165 . G . PASS END=151288167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:21,0 chr1 151288168 . C . PASS END=151288169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 151288170 . G . PASS END=151288173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 151288174 . C . PASS END=151288174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 151288175 . A . PASS END=151288176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151288177 . G . PASS END=151288177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151288178 . G . PASS END=151288196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:24,0 chr1 151288197 . A . PASS END=151288197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 151288198 . G . PASS END=151288216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr1 151288217 . T . PASS END=151288217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 151288218 . G . PASS END=151288251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,908:0,72,255:26,0 chr1 151288252 . G . PASS END=151288325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:28:0,81,1119:0,84,255:36,0 chr1 151288326 . T . PASS END=151288326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1129:0,63,255:29,0 chr1 151288327 . G . PASS END=151288332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 151288333 . A . PASS END=151288333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 151288334 . A . PASS END=151288340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 151288341 . A . PASS END=151288341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 151288342 . T . PASS END=151288353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 151288354 . A . PASS END=151288357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 151288358 . G . PASS END=151288358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 151288359 . T . PASS END=151288381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1202:0,83,255:31,0 chr1 151288382 . A . PASS END=151288390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:26,0 chr1 151288391 . A G, 145.40 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,6,0:0,27,0:95:183,98,0,1213,98,1213:255,99,0:0,0:1.4540e+02,9.5404e+01,0.0000e+00,4.5000e+02,1.3017e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,15:0,0,17,16 chr1 151288392 . T . PASS END=151288397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 151288398 . T . PASS END=151288428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1155:0,80,255:32,0 chr1 151288429 . G . PASS END=151288436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1119:0,82,255:31,0 chr1 151288437 . A . PASS END=151288437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:30,0 chr1 151288438 . A . PASS END=151288441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 151288442 . C . PASS END=151288442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1052:0,79,255:30,0 chr1 151288443 . A . PASS END=151288448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 151288449 . T . PASS END=151288449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 151288450 . C . PASS END=151288457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:30,0 chr1 151288458 . A . PASS END=151288460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,987:0,63,255:29,0 chr1 151288461 . C . PASS END=151288498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1130:0,86,255:34,0 chr1 151288499 . C . PASS END=151288500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 151288501 . C . PASS END=151288501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 151288502 . C . PASS END=151288505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 151288506 . G . PASS END=151288506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 151288507 . A . PASS END=151288507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1218:0,75,255:28,0 chr1 151288508 . G . PASS END=151288510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1350:0,99,255:31,0 chr1 151288511 . A . PASS END=151288511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1084:0,66,255:28,0 chr1 151288512 . T . PASS END=151288512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 151288513 . A . PASS END=151288514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 151288515 . A . PASS END=151288561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1141:0,83,255:36,0 chr1 151288562 . C . PASS END=151288562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 151288563 . C . PASS END=151288575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1288:0,92,255:34,0 chr1 151288576 . A . PASS END=151288576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:30,0 chr1 151288577 . C . PASS END=151288791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:30:0,86,1189:0,86,255:40,0 chr1 151288792 . A . PASS END=151288792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 151288793 . C . PASS END=151288800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 151288801 . G . PASS END=151288801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 151288802 . G . PASS END=151288816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 151288817 . C . PASS END=151288818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 151288819 . C . PASS END=151288830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:30,0 chr1 151288831 . T . PASS END=151288832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 151288833 . A . PASS END=151288837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151288838 . T . PASS END=151288870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 151288871 . C . PASS END=151288871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 151288872 . A . PASS END=151288872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 151288873 . G . PASS END=151288886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:25,0 chr1 151288887 . T . PASS END=151288887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:23,0 chr1 151288888 . T . PASS END=151288892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151288893 . G . PASS END=151288904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,76,255:27,0 chr1 151288905 . G . PASS END=151288905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151288906 . T . PASS END=151288914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 151288915 . A . PASS END=151288932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:28,0 chr1 151288933 . C . PASS END=151288936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,68,255:23,0 chr1 151288937 . C . PASS END=151288944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,65,255:19,0 chr1 151288945 . C . PASS END=151288947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 151288948 . T . PASS END=151288951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 151288952 . T . PASS END=151288985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,629:0,51,255:19,0 chr1 151298648 . A . PASS END=151298655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,120,1800:0,210,255:40,0 chr1 151313141 . A . PASS END=151313141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 151313236 . T . PASS END=151313236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 151313332 . G . PASS END=151313332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,102,1530:0,104,255:33,0 chr1 151313410 . G . PASS END=151313410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 151313485 . G . PASS END=151313485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 151313496 . T . PASS END=151313496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 151313504 . C . PASS END=151313504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 151313544 . T . PASS END=151313544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 151313584 . G . PASS END=151313584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 151313676 . G . PASS END=151313676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1490:0,55,255:39,2 chr1 151313781 . G . PASS END=151313781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:33,0 chr1 151313824 . T . PASS END=151313824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 151313901 . T . PASS END=151313901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 151313941 . C . PASS END=151313941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 151313967 . T . PASS END=151313967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151314001 . A . PASS END=151314001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 151314289 . C . PASS END=151314289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 151314298 . T . PASS END=151314298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 151314493 . T . PASS END=151314561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,126,255:40,0 chr1 151314662 . T . PASS END=151314847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:37:0,82,1278:0,82,255:40,0 chr1 151314848 . T . PASS END=151314848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:34,0 chr1 151314849 . T . PASS END=151315121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:82:33:0,82,1141:0,82,255:40,0 chr1 151315122 . C . PASS END=151315122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:32,0 chr1 151315123 . T . PASS END=151315202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1186:0,83,255:34,0 chr1 151315203 . G . PASS END=151315203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 151315204 . G . PASS END=151315207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:29,0 chr1 151315208 . T . PASS END=151315209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 151315210 . C . PASS END=151315212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 151315213 . C . PASS END=151315228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,961:0,74,255:26,0 chr1 151315229 . C . PASS END=151315244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 151315245 . T . PASS END=151315245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 151315246 . G . PASS END=151315249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151315250 . A . PASS END=151315261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1047:0,71,255:26,0 chr1 151315262 . T . PASS END=151315283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr1 151315284 . C . PASS END=151315321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 151315322 . C . PASS END=151315335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:18,0 chr1 151315336 . C . PASS END=151315336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 151315337 . A . PASS END=151315356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 151315357 . G . PASS END=151315357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 151315358 . T . PASS END=151315361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 151315362 . A . PASS END=151315362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,480:0,31,255:15,0 chr1 151315363 . T . PASS END=151315369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 151315370 . A . PASS END=151315382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 151315383 . G . PASS END=151315455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,520:0,41,255:19,0 chr1 151315456 . G . PASS END=151315456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 151315457 . G . PASS END=151315497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,662:0,54,255:19,0 chr1 151315498 . A . PASS END=151315531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:22,0 chr1 151315532 . A . PASS END=151315533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 151315534 . C . PASS END=151315539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 151315540 . G . PASS END=151315541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 151315542 . G . PASS END=151315548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151315549 . C . PASS END=151315559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,637:0,43,255:19,0 chr1 151315560 . T . PASS END=151315562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 151315563 . G . PASS END=151315581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,721:0,57,255:19,0 chr1 151315582 . C . PASS END=151315593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 151315594 . T . PASS END=151315594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:21,0 chr1 151315595 . C . PASS END=151315615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,799:0,69,255:23,0 chr1 151315616 . A . PASS END=151315616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:21,0 chr1 151315617 . G . PASS END=151315634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 151315635 . G . PASS END=151315635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 151315636 . C . PASS END=151315640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151315641 . A . PASS END=151315654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr1 151315669 . G . PASS END=151315669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 151315805 . C . PASS END=151315805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 151315818 . C . PASS END=151315818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151315819 . T . PASS END=151315820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 151315821 . G . PASS END=151315823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:23,0 chr1 151315824 . C . PASS END=151315824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr1 151315825 . A . PASS END=151315826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 151315827 . T . PASS END=151315827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 151315828 . C . PASS END=151315829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,832:0,61,255:26,0 chr1 151315830 . C . PASS END=151315832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 151315833 . T . PASS END=151315833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 151315834 . G . PASS END=151315835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 151315836 . C . PASS END=151315838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151315839 . C . PASS END=151315839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151315840 . T . PASS END=151315840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 151315841 . T . PASS END=151315855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 151315856 . C . PASS END=151315856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 151315857 . T . PASS END=151315857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151315858 . G . PASS END=151315858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:30,0 chr1 151315859 . G . PASS END=151315868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1058:0,86,255:33,0 chr1 151315869 . A . PASS END=151315869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1080:0,69,255:31,0 chr1 151315870 . C . PASS END=151315872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1172:0,85,255:33,0 chr1 151315873 . T . PASS END=151315873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:31,0 chr1 151315874 . T . PASS END=151315892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1083:0,82,255:33,0 chr1 151315893 . T . PASS END=151315895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:32:0,68,1086:0,68,255:28,0 chr1 151315896 . C . PASS END=151315898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1194:0,83,255:28,0 chr1 151315899 . A . PASS END=151315899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1019:0,63,255:25,0 chr1 151315900 . G . PASS END=151315902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1131:0,80,255:27,0 chr1 151315903 . G . PASS END=151315903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 151315904 . C . PASS END=151315908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,89,255:28,0 chr1 151315909 . T . PASS END=151315909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 151315910 . C . PASS END=151315913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151315914 . C . PASS END=151315918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,972:0,70,255:26,0 chr1 151316157 . C . PASS END=151316160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 151316161 . G A, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,884,69,884:255,69,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,10:0,0,11,12 chr1 151316162 . A . PASS END=151316172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr1 151316173 . C . PASS END=151316174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151316175 . T . PASS END=151316177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151316178 . G . PASS END=151316193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1210:0,90,255:33,0 chr1 151316194 . A . PASS END=151316194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 151316195 . G . PASS END=151316198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1257:0,89,255:34,0 chr1 151316199 . G . PASS END=151316317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:38,0 chr1 151316318 . T . PASS END=151316321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1037:0,60,255:27,0 chr1 151316322 . C . PASS END=151316323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 151316324 . C . PASS END=151316332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr1 151316333 . G . PASS END=151316335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:29:0,54,810:0,87,255:19,0 chr1 151316336 . G . PASS END=151316337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:20,0 chr1 151316338 . T . PASS END=151316358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,682:0,44,255:19,0 chr1 151316360 . T . PASS END=151316360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 151316673 . A . PASS END=151316754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,108,1629:0,108,255:40,0 chr1 151316757 . G . PASS END=151316757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 151316893 . T . PASS END=151316986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:29:0,81,1062:0,81,255:37,0 chr1 151316987 . A . PASS END=151316988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 151316989 . C . PASS END=151316993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151316994 . A . PASS END=151317012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:26:0,65,984:0,65,255:26,0 chr1 151317204 . C . PASS END=151317207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:89:52:0,89,1489:0,89,255:40,0 chr1 151317208 . A . PASS END=151317208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:73:52:0,73,1529:0,73,255:40,0 chr1 151317209 . G . PASS END=151317211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:92:53:0,92,1490:0,92,255:40,0 chr1 151317212 . A . PASS END=151317212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:75:52:0,75,1585:0,75,255:40,0 chr1 151317213 . T . PASS END=151317235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:52:0,89,1491:0,89,255:40,0 chr1 151317236 . A . PASS END=151317237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:71:53:0,71,1638:0,71,255:40,0 chr1 151317238 . A . PASS END=151317245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,141,255:40,0 chr1 151317246 . G . PASS END=151317298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:80:48:0,80,1800:0,80,255:40,0 chr1 151317299 . A . PASS END=151317299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1700:0,78,255:39,0 chr1 151317300 . T . PASS END=151317311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,99,1485:0,102,255:40,0 chr1 151317312 . C . PASS END=151317312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:32,0 chr1 151317313 . T . PASS END=151317316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:92:36:0,92,1340:0,92,255:33,0 chr1 151317317 . C . PASS END=151317317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr1 151317318 . T . PASS END=151317318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 151317319 . C . PASS END=151317319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1224:0,50,255:28,0 chr1 151317320 . T . PASS END=151317324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:28,0 chr1 151317582 . C . PASS END=151317664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,163,255:40,0 chr1 151318404 . C . PASS END=151318411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr1 151318412 . C . PASS END=151318429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1025:0,86,255:33,0 chr1 151318430 . C . PASS END=151318437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,79,255:26,0 chr1 151318450 . G . PASS END=151318450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 151318676 . C . PASS END=151318676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 151318681 . G . PASS END=151318756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:25,0 chr1 151318757 . C . PASS END=151318769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 151318770 . C . PASS END=151318770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151318771 . T . PASS END=151318796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,613:0,51,255:19,0 chr1 151319042 . C . PASS END=151319042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 151319090 . G . PASS END=151319090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 151319097 . A . PASS END=151319097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr1 151337019 . T . PASS END=151337022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 151337023 . A . PASS END=151337023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:20,0 chr1 151337024 . T . PASS END=151337029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,703:0,63,255:21,0 chr1 151337030 . T . PASS END=151337030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:20,0 chr1 151337031 . G . PASS END=151337033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 151337034 . A . PASS END=151337034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 151337035 . G . PASS END=151337039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 151337040 . A . PASS END=151337040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr1 151337041 . C . PASS END=151337041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151337042 . A . PASS END=151337042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:20,0 chr1 151337043 . A . PASS END=151337049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,922:0,69,255:25,0 chr1 151337050 . C . PASS END=151337050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 151337051 . C . PASS END=151337060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,62,255:25,0 chr1 151337061 . G . PASS END=151337064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1147:0,87,255:30,0 chr1 151337065 . T . PASS END=151337065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 151337066 . C . PASS END=151337066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 151337067 . A . PASS END=151337067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1015:0,38,255:29,0 chr1 151337068 . T . PASS END=151337181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:31:0,93,1090:0,93,255:40,0 chr1 151337402 . C . PASS END=151337402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 151337403 . T . PASS END=151337406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 151337407 . G . PASS END=151337407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 151337408 . A . PASS END=151337408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 151337409 . G . PASS END=151337409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 151337410 . A . PASS END=151337412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:29,0 chr1 151337413 . A . PASS END=151337413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 151337414 . G . PASS END=151337520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:34:0,85,1241:0,85,255:40,0 chr1 151337665 . C . PASS END=151337709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1211:0,88,255:36,0 chr1 151337710 . C . PASS END=151337710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr1 151337711 . A . PASS END=151337739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1260:0,90,255:36,0 chr1 151337740 . G . PASS END=151337740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,971:0,21,255:27,0 chr1 151337741 . C . PASS END=151337742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 151337743 . G . PASS END=151337747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151337748 . C . PASS END=151337751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151337752 . G . PASS END=151337753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1078:0,74,255:26,0 chr1 151337754 . A . PASS END=151337757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151338039 . C . PASS END=151338160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,106,1421:0,106,255:40,0 chr1 151338244 . C . PASS END=151338322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:40,0 chr1 151338751 . C . PASS END=151338752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 151338753 . C . PASS END=151338763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:8,0 chr1 151338764 . A . PASS END=151338764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 151338765 . A . PASS END=151338765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151338766 . G . PASS END=151338794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:13,0 chr1 151338795 . C . PASS END=151338831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,460:0,42,255:19,0 chr1 151338832 . G . PASS END=151338835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151338836 . A . PASS END=151338839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 151338840 . C . PASS END=151338850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 151338851 . A . PASS END=151338851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 151338852 . G . PASS END=151338856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 151338857 . T . PASS END=151338857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 151338858 . C . PASS END=151338889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 151338890 . C . PASS END=151338890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 151338891 . G . PASS END=151338894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 151338895 . C . PASS END=151338897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151338898 . G . PASS END=151338902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151338903 . A . PASS END=151338929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 151339198 . C . PASS END=151339199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 151339200 . G . PASS END=151339315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,994:0,81,255:40,0 chr1 151339316 . A . PASS END=151339316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:30,0 chr1 151339317 . C . PASS END=151339319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:31,0 chr1 151339320 . C . PASS END=151339320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:30,0 chr1 151339321 . C . PASS END=151339342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:32,0 chr1 151339343 . C . PASS END=151339343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr1 151339344 . A . PASS END=151339349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151339350 . A . PASS END=151339373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 151339374 . A . PASS END=151339380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 151340674 . C . PASS END=151340696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,693:0,60,255:25,0 chr1 151340697 . T . PASS END=151340697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 151340698 . C . PASS END=151340708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr1 151340709 . G . PASS END=151340788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1056:0,83,255:34,0 chr1 151340789 . C . PASS END=151340795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:23,0 chr1 151341476 . A . PASS END=151341540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,770:0,63,255:26,0 chr1 151341541 . A . PASS END=151341544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151341545 . G . PASS END=151341548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 151341549 . G . PASS END=151341585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1158:0,80,255:33,0 chr1 151341586 . C . PASS END=151341586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 151341587 . C . PASS END=151341609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1151:0,96,255:33,0 chr1 151341610 . C . PASS END=151341610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 151341611 . A . PASS END=151341623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 151341624 . C . PASS END=151341624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 151341625 . A . PASS END=151341626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151341627 . C . PASS END=151341627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 151341628 . T . PASS END=151341632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151341633 . C . PASS END=151341633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 151341634 . T . PASS END=151341639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151341640 . T . PASS END=151341665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr1 151341918 . C . PASS END=151341945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1271:0,99,255:38,0 chr1 151341946 . A . PASS END=151341946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:36,0 chr1 151341947 . C . PASS END=151341958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1519:0,110,255:40,0 chr1 151341959 . C . PASS END=151341959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:40,0 chr1 151341960 . C . PASS END=151342030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:38:0,90,1350:0,97,255:40,0 chr1 151342189 . C . PASS END=151342190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 151342191 . T . PASS END=151342191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 151342192 . T . PASS END=151342198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,840:0,72,255:24,0 chr1 151342199 . C . PASS END=151342204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 151342205 . A . PASS END=151342205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:29,0 chr1 151342206 . G . PASS END=151342233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1157:0,80,255:33,0 chr1 151342234 . C . PASS END=151342234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 151342235 . A . PASS END=151342262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:34:0,94,1288:0,94,255:38,0 chr1 151342263 . C . PASS END=151342263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:34,0 chr1 151342264 . G . PASS END=151342327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1224:0,83,255:39,0 chr1 151342328 . A . PASS END=151342344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr1 151342345 . C . PASS END=151342345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 151342346 . G . PASS END=151342350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 151342351 . G . PASS END=151342374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 151342375 . T . PASS END=151342375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 151345114 . C . PASS END=151345117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 151372055 . G . PASS END=151372055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 151372064 . A . PASS END=151372068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 151372069 . A . PASS END=151372069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 151372070 . G . PASS END=151372073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:17,0 chr1 151372074 . T . PASS END=151372074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:16,0 chr1 151372075 . T . PASS END=151372080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 151372081 . G . PASS END=151372081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 151372082 . T . PASS END=151372090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 151372091 . G . PASS END=151372091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 151372092 . G . PASS END=151372100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr1 151372101 . C . PASS END=151372119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:25,0 chr1 151372120 . A . PASS END=151372120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 151372121 . C . PASS END=151372122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,944:0,78,255:26,0 chr1 151372123 . G . PASS END=151372126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 151372127 . T . PASS END=151372127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151372128 . A . PASS END=151372128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151372129 . C . PASS END=151372132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151372133 . A . PASS END=151372137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151372138 . G A, 46.47 PASS DP=29;MQ=248.82;MQRankSum=4.427;ReadPosRankSum=2.045;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,11,0:0.379,0.000:29:12,6,0:6,5,0:46:81,0,50,393,607,1000:255,0,255:17,0:4.6472e+01,1.1959e-04,5.3000e+01,3.9314e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,4,7:9,9,5,6 chr1 151372139 . T . PASS END=151372146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 151372147 . C . PASS END=151372147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 151372148 . G . PASS END=151372172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 151372173 . C . PASS END=151372175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 151372176 . T . PASS END=151372186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,61,255:23,0 chr1 151372187 . C . PASS END=151372203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 151372457 . G . PASS END=151372473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,845:0,66,255:26,0 chr1 151372474 . G . PASS END=151372478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1003:0,81,255:28,0 chr1 151372479 . T . PASS END=151372489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1053:0,71,255:25,0 chr1 151372490 . C . PASS END=151372500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151372501 . A . PASS END=151372503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151372504 . G . PASS END=151372504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151372505 . C . PASS END=151372505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151372506 . G . PASS END=151372507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 151372508 . A . PASS END=151372508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 151372509 . G . PASS END=151372529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 151372530 . C . PASS END=151372561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 151372562 . C . PASS END=151372562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151372563 . A . PASS END=151372563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 151372564 . A . PASS END=151372568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,964:0,81,255:27,0 chr1 151372569 . T . PASS END=151372569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,850:0,42,255:26,0 chr1 151372570 . C . PASS END=151372570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 151372571 . T . PASS END=151372574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 151372575 . A . PASS END=151372575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,838:0,51,255:24,0 chr1 151372576 . T . PASS END=151372576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151372577 . T . PASS END=151372577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 151372578 . A . PASS END=151372578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:26,0 chr1 151372579 . T . PASS END=151372586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1031:0,84,255:30,0 chr1 151372587 . A . PASS END=151372601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,80,255:26,0 chr1 151372602 . C . PASS END=151372602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,945:0,37,255:21,0 chr1 151372603 . T . PASS END=151372605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 151372606 . G . PASS END=151372606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 151372607 . T . PASS END=151372609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 151372610 . C . PASS END=151372610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 151372611 . T . PASS END=151372611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:20,0 chr1 151372612 . C . PASS END=151372627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 151372628 . T . PASS END=151372628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr1 151372629 . T . PASS END=151372629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151372630 . T . PASS END=151372630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 151372631 . C . PASS END=151372632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 151372633 . A . PASS END=151372636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 151372637 . T . PASS END=151372637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:20,0 chr1 151372638 . T . PASS END=151372638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 151372639 . T . PASS END=151372661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,726:0,63,255:22,0 chr1 151372662 . G . PASS END=151372662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 151372663 . T . PASS END=151372663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 151372918 . G . PASS END=151372918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 151372919 . A . PASS END=151372919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 151372920 . T . PASS END=151372944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:26,0 chr1 151372945 . A . PASS END=151372946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151372947 . A . PASS END=151372947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 151372948 . C . PASS END=151372952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 151372953 . A . PASS END=151372953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 151372954 . T . PASS END=151372954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 151372955 . A . PASS END=151372955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 151372956 . G . PASS END=151373064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1055:0,80,255:39,0 chr1 151373240 . C . PASS END=151373321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:35:0,80,1215:0,80,255:40,0 chr1 151373715 . C . PASS END=151373724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 151373725 . G . PASS END=151373725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 151373726 . A . PASS END=151373727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 151373728 . A . PASS END=151373729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151373730 . G . PASS END=151373735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151373736 . G . PASS END=151373736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 151373737 . A . PASS END=151373749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,963:0,84,255:29,0 chr1 151373750 . G . PASS END=151373750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 151373751 . C . PASS END=151373765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151373766 . G . PASS END=151373766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 151373767 . C . PASS END=151373768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151373769 . C . PASS END=151373769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 151373770 . G . PASS END=151373776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr1 151373777 . A . PASS END=151373777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 151373778 . G . PASS END=151373778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 151373779 . T . PASS END=151373779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:28,0 chr1 151373780 . A . PASS END=151373785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 151373786 . C . PASS END=151373787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151373788 . G . PASS END=151373793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 151373794 . G . PASS END=151373796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 151373797 . T . PASS END=151373797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:24,0 chr1 151373798 . G . PASS END=151373831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,817:0,66,255:26,0 chr1 151374018 . T . PASS END=151374024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,191,255:40,0 chr1 151374025 . T C, 50.00 PASS DP=72;MQ=250.00;MQRankSum=7.153;ReadPosRankSum=2.870;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,43,0:0.597,0.000:72:11,23,0:18,20,0:47:85,0,47,1496,980,2476:255,0,255:29,0:5.0000e+01,9.1120e-05,4.9598e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,11,22,21:10,19,26,17 chr1 151374026 . C . PASS END=151374062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:71:0,120,1800:0,175,255:40,0 chr1 151374063 . C . PASS END=151374106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,159,255:40,0 chr1 151374293 . T . PASS END=151374305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:78:0,120,1800:0,210,255:40,0 chr1 151377278 . T . PASS END=151377285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1156:0,85,255:32,0 chr1 151377286 . C . PASS END=151377289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1132:0,85,255:32,0 chr1 151377290 . C . PASS END=151377290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:32,0 chr1 151377291 . A . PASS END=151377361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:33:0,82,1105:0,82,255:40,0 chr1 151377362 . A . PASS END=151377362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1094:0,58,255:30,0 chr1 151377363 . C . PASS END=151377377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1227:0,88,255:33,0 chr1 151377378 . G . PASS END=151377378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr1 151377379 . T . PASS END=151377742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1264:0,81,255:40,0 chr1 151377743 . G . PASS END=151377744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:38:0,78,1170:0,114,255:26,0 chr1 151377745 . C . PASS END=151377761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:30:0,81,1215:0,90,255:30,0 chr1 151377762 . G . PASS END=151377763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151377764 . C . PASS END=151377765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151377766 . A . PASS END=151377767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 151377768 . G . PASS END=151377781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1086:0,84,255:28,0 chr1 151377782 . A . PASS END=151377782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 151377783 . A . PASS END=151377785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151377786 . A . PASS END=151377787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151377788 . A . PASS END=151377794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 151377795 . A . PASS END=151377795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr1 151377796 . C . PASS END=151378792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,1149:0,81,255:40,0 chr1 151378793 . T . PASS END=151378793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:32,0 chr1 151378794 . G . PASS END=151378940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:37:0,87,1288:0,87,255:40,0 chr1 151379083 . C . PASS END=151379107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:85:0,120,1800:0,226,255:40,0 chr1 151379385 . A . PASS END=151379385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 151379387 . C . PASS END=151379499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,138,255:40,0 chr1 151379501 . T . PASS END=151379501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 151379711 . C . PASS END=151379767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:69:0,120,1800:0,167,255:40,0 chr1 151380576 . T . PASS END=151380576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 151380577 . T . PASS END=151380584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,768:0,66,255:23,0 chr1 151380585 . T . PASS END=151380585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 151380586 . G . PASS END=151380595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 151380596 . A . PASS END=151380596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,779:0,36,255:23,0 chr1 151380597 . G . PASS END=151380598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,1014:0,68,255:26,0 chr1 151380599 . T . PASS END=151380601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151380602 . A . PASS END=151380602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 151380603 . G . PASS END=151380605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151380606 . C . PASS END=151380606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 151380607 . A . PASS END=151380683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1211:0,87,255:40,0 chr1 151380684 . C . PASS END=151380704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1202:0,83,255:34,0 chr1 151380705 . C . PASS END=151380705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 151380706 . C . PASS END=151380711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 151380712 . C . PASS END=151380716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,74,255:26,0 chr1 151380885 . A . PASS END=151380910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:26,0 chr1 151380911 . G . PASS END=151380993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:39,0 chr1 151380994 . G . PASS END=151380994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:29,0 chr1 151380995 . A . PASS END=151381007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1202:0,93,255:31,0 chr1 151381008 . G . PASS END=151381008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 151381009 . A . PASS END=151381016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 151381017 . G . PASS END=151381017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 151381018 . G . PASS END=151381019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 151381020 . A . PASS END=151381027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 151381028 . T . PASS END=151381028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:25,0 chr1 151381029 . G . PASS END=151381053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 151381054 . T . PASS END=151381057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:16,0 chr1 151381164 . C . PASS END=151381164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 151381170 . C . PASS END=151381170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 151381171 . T . PASS END=151381182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 151381183 . T . PASS END=151381184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 151381185 . C . PASS END=151381189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151381190 . C . PASS END=151381190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 151381191 . C . PASS END=151381194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151381195 . A . PASS END=151381195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 151381196 . G . PASS END=151381197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:31,0 chr1 151381198 . T . PASS END=151381198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 151381199 . G . PASS END=151381275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1150:0,80,255:38,0 chr1 151381276 . C . PASS END=151381283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:32,0 chr1 151381284 . G . PASS END=151381293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:22,0 chr1 151381294 . A . PASS END=151381294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:57:34:0,57,855:0,102,255:19,0 chr1 151381295 . C . PASS END=151381299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:20,0 chr1 151381300 . C . PASS END=151381304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,630:0,81,255:17,0 chr1 151384101 . C . PASS END=151384274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:36:0,91,1235:0,91,255:40,0 chr1 151384772 . C . PASS END=151384872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:42:0,110,1549:0,110,255:40,0 chr1 151395873 . T . PASS END=151395875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 151395876 . T . PASS END=151395876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:27,0 chr1 151395877 . A . PASS END=151395879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:30:0,63,1055:0,63,255:33,0 chr1 151395880 . T . PASS END=151395881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 151395882 . C . PASS END=151395883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:38,0 chr1 151395884 . T . PASS END=151395884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 151395885 . A . PASS END=151395885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:38,0 chr1 151395886 . G . PASS END=151395887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1426:0,101,255:37,0 chr1 151395888 . G . PASS END=151395889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1311:0,62,255:37,0 chr1 151395890 . C . PASS END=151395893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1427:0,82,255:37,0 chr1 151395894 . G . PASS END=151395894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:36,0 chr1 151395895 . A . PASS END=151395896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 151395897 . C . PASS END=151395898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:62:39:0,62,1272:0,62,255:35,0 chr1 151395899 . T . PASS END=151395899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:50:40:0,50,1284:0,50,255:36,0 chr1 151395900 . T . PASS END=151395900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 151395901 . T . PASS END=151395901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 151395902 . T . PASS END=151395904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 151395905 . A . PASS END=151395905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1312:0,78,255:33,0 chr1 151395906 . A . PASS END=151395906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 151395907 . G . PASS END=151395907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:33,0 chr1 151395908 . T . PASS END=151395908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,99,1485:0,100,255:33,0 chr1 151395909 . G . PASS END=151395909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1345:0,78,255:33,0 chr1 151395910 . G . PASS END=151395910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1490:0,87,255:36,0 chr1 151395911 . C . PASS END=151395911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:38:42:0,38,1308:0,38,255:33,0 chr1 151395912 . A . PASS END=151395916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1421:0,81,255:39,0 chr1 151395917 . A . PASS END=151395917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:39,0 chr1 151395918 . G . PASS END=151395918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:42:0,88,1520:0,88,255:40,0 chr1 151395919 . C . PASS END=151395919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:40,0 chr1 151395920 . T . PASS END=151395999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1178:0,83,255:40,0 chr1 151396000 . T . PASS END=151396002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151396003 . G . PASS END=151396015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,60,255:26,0 chr1 151396016 . T . PASS END=151396027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:20:0,43,668:0,43,255:19,0 chr1 151396030 . G . PASS END=151396030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 151396425 . C . PASS END=151396470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:29:0,80,1027:0,80,255:38,0 chr1 151396471 . A . PASS END=151396471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:48:43:0,48,1263:0,48,255:36,0 chr1 151396472 . T . PASS END=151396762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:41:0,84,1260:0,99,255:40,0 chr1 151397431 . A . PASS END=151397537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,1072:0,80,255:40,0 chr1 151397557 . T . PASS END=151397557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 151400285 . T . PASS END=151400285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151400286 . C . PASS END=151400289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 151400290 . T . PASS END=151400293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 151400294 . T . PASS END=151400294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 151400295 . G . PASS END=151400305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,817:0,66,255:23,0 chr1 151400306 . T . PASS END=151400306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:22,0 chr1 151400307 . G . PASS END=151400315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 151400316 . G . PASS END=151400324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 151400325 . G . PASS END=151400325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 151400326 . T . PASS END=151400328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr1 151400329 . T . PASS END=151400329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 151400330 . T . PASS END=151400334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151400335 . A . PASS END=151400335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:27,0 chr1 151400336 . G . PASS END=151400830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:33:0,83,1182:0,83,255:40,0 chr1 151400831 . C . PASS END=151400857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 151400858 . A . PASS END=151400865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 151400866 . G . PASS END=151400866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 151400867 . C . PASS END=151400886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 151400887 . G . PASS END=151400889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151402079 . C . PASS END=151402082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,108,1620:0,111,255:39,0 chr1 151402083 . A . PASS END=151402188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:36:0,90,1350:0,101,255:40,0 chr1 151403142 . C . PASS END=151403291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1215:0,95,255:40,0 chr1 151403292 . A . PASS END=151403317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:24,0 chr1 151413404 . C . PASS END=151413404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 151413405 . A . PASS END=151413405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 151413406 . T . PASS END=151413411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,668:0,60,255:21,0 chr1 151413412 . T . PASS END=151413412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:19,0 chr1 151413413 . T . PASS END=151413423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:22,0 chr1 151413424 . G . PASS END=151413424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:22,0 chr1 151413425 . T . PASS END=151413427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:23,0 chr1 151413428 . C . PASS END=151413428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 151413429 . A . PASS END=151413440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 151413441 . T . PASS END=151413441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 151413442 . G . PASS END=151413450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 151413451 . C . PASS END=151413451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 151413452 . T . PASS END=151413460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 151413461 . C . PASS END=151413461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151413462 . C . PASS END=151413475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,986:0,70,255:27,0 chr1 151413476 . C . PASS END=151413476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,920:0,37,255:23,0 chr1 151413477 . G . PASS END=151413500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,801:0,61,255:25,0 chr1 151413501 . A . PASS END=151413501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 151413502 . G . PASS END=151413503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 151413504 . A . PASS END=151413504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 151413505 . A . PASS END=151413510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 151413511 . G . PASS END=151413511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 151413512 . C . PASS END=151413522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr1 151413523 . A . PASS END=151413527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,775:0,50,255:19,0 chr1 151413528 . C . LowGQ END=151413528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,667:6,0,255:18,0 chr1 151413529 . A . PASS END=151413563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:19,0 chr1 151414557 . C . PASS END=151414681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:93:31:0,93,1157:0,93,255:40,0 chr1 151431516 . C . PASS END=151431517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 151431518 . G . PASS END=151431522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 151431523 . A . PASS END=151431532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:13,0 chr1 151431533 . C . PASS END=151431535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 151490996 . A . PASS END=151491004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:25,0 chr1 151491005 . G . PASS END=151491018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,964:0,81,255:35,0 chr1 151491019 . T . PASS END=151491020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:34,0 chr1 151491021 . A . PASS END=151491115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,90,255:40,0 chr1 151491116 . C . PASS END=151491144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 151491145 . C . PASS END=151491161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 151491162 . G . PASS END=151491163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 151491164 . G . PASS END=151491187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 151491188 . T . PASS END=151491189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:31:16:0,31,504:0,31,255:16,0 chr1 151491190 . T . PASS END=151491203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 151491204 . G . PASS END=151491216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 151491217 . C . PASS END=151491217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151491218 . G . PASS END=151491246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 151491247 . G . PASS END=151491253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 151491254 . G . PASS END=151491254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 151491255 . A . PASS END=151491257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 151491258 . A . PASS END=151491266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151491267 . C . PASS END=151491267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 151491268 . A . PASS END=151491271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,488:0,39,255:13,0 chr1 151491272 . G . PASS END=151491272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 151491273 . C . PASS END=151491273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 151491274 . T . PASS END=151491287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:16,0 chr1 151491288 . T . PASS END=151491288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:15,0 chr1 151491289 . G . PASS END=151491326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:18,0 chr1 151491327 . T . PASS END=151491327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 151491328 . T . PASS END=151491342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,668:0,51,255:18,0 chr1 151491343 . G . PASS END=151491361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:21,0 chr1 151491362 . G . PASS END=151491377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,623:0,54,255:18,0 chr1 151491378 . G . PASS END=151491380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 151491381 . A . PASS END=151491381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 151491382 . T . PASS END=151491382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 151491383 . G . PASS END=151491383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 151491384 . G . PASS END=151491442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,861:0,65,255:26,0 chr1 151491443 . A . PASS END=151491444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 151491445 . T . PASS END=151491467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 151491468 . A . PASS END=151491480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 151491481 . A . PASS END=151491481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:26,0 chr1 151491482 . G . PASS END=151491482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151491483 . T . PASS END=151491493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1006:0,68,255:26,0 chr1 151491494 . G . PASS END=151491494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:23,0 chr1 151491495 . G . PASS END=151491524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:25,0 chr1 151491525 . C . PASS END=151491525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:21,0 chr1 151491526 . A . PASS END=151491526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:21,0 chr1 151491527 . G . PASS END=151491541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 151491542 . A . PASS END=151491571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,537:0,45,255:19,0 chr1 151491572 . G . PASS END=151491572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 151491573 . C . PASS END=151491595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,582:0,48,255:16,0 chr1 151491596 . A . PASS END=151491596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 151491597 . C . PASS END=151491605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:17,0 chr1 151491606 . T . PASS END=151491607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 151491608 . C . PASS END=151491608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 151491609 . C . PASS END=151491624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,762:0,63,255:21,0 chr1 151491625 . A . PASS END=151491625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,479:0,15,255:19,0 chr1 151491626 . C . PASS END=151491674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,784:0,63,255:26,0 chr1 151491675 . G . PASS END=151491680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:29,0 chr1 151491681 . G . PASS END=151491681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 151491682 . C . PASS END=151491700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1102:0,86,255:32,0 chr1 151491701 . A . PASS END=151491701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:30,0 chr1 151491702 . C . PASS END=151491705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,108,255:34,0 chr1 151491706 . T . PASS END=151491706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:33,0 chr1 151491707 . A . PASS END=151491795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1075:0,80,255:34,0 chr1 151491796 . T . PASS END=151491799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:68:28:0,68,1008:0,68,255:26,0 chr1 151491800 . A . PASS END=151491800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr1 151491801 . C . PASS END=151491808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:24,0 chr1 151491809 . T . PASS END=151491809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:22,0 chr1 151491810 . G . PASS END=151491833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,906:0,72,255:24,0 chr1 151491834 . C . PASS END=151491837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 151491838 . G . PASS END=151491844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:30:22:0,30,450:0,66,255:12,0 chr1 151491845 . G . PASS END=151491845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:27:21:0,27,405:0,63,255:9,0 chr1 151491846 . C . PASS END=151491849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:18:0,30,450:0,54,255:10,0 chr1 151491850 . G . PASS END=151491851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:18:0,27,405:0,54,255:9,0 chr1 151491852 . A . PASS END=151491853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:12,0 chr1 151491854 . C . PASS END=151491854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 151491855 . C . PASS END=151491855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 151491856 . C . PASS END=151491856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 151491857 . A . PASS END=151491868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr1 151492642 . T . PASS END=151492653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1285:0,98,255:40,0 chr1 151492654 . C . PASS END=151492742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1238:0,81,255:40,0 chr1 151492890 . A . PASS END=151492903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1257:0,89,255:35,0 chr1 151492904 . A . PASS END=151492904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:33,0 chr1 151492905 . A . PASS END=151492959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1278:0,81,255:40,0 chr1 151493072 . A . PASS END=151493126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:94:37:0,94,1252:0,94,255:40,0 chr1 151493127 . A . PASS END=151493127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1576:0,75,255:40,0 chr1 151493128 . A . PASS END=151493167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:41:0,83,1269:0,83,255:40,0 chr1 151495910 . A . PASS END=151495914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 151495915 . G . PASS END=151495919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr1 151495920 . A . PASS END=151495923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:33,0 chr1 151495924 . A . PASS END=151495924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr1 151495925 . G . PASS END=151496037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,89,255:40,0 chr1 151496702 . G . PASS END=151496834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,95,255:40,0 chr1 151497150 . G . PASS END=151497161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,568:0,48,255:19,0 chr1 151497162 . A . PASS END=151497162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,392:0,39,255:18,0 chr1 151497163 . C . PASS END=151497170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 151497171 . C . PASS END=151497206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,754:0,63,255:24,0 chr1 151497207 . G . PASS END=151497207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 151497208 . A . PASS END=151497214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:26,0 chr1 151497215 . G . PASS END=151497222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:29,0 chr1 151497223 . T . PASS END=151497228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151497229 . A . PASS END=151497229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151497230 . G . PASS END=151497232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151497233 . G . PASS END=151497234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151497235 . A . PASS END=151497235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 151497236 . G . PASS END=151497262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1116:0,87,255:36,0 chr1 151497263 . A . PASS END=151497263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:32,0 chr1 151497264 . G . PASS END=151497319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1164:0,83,255:33,0 chr1 151497320 . A . PASS END=151497332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr1 151497333 . C . PASS END=151497351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:18:0,41,673:0,41,255:18,0 chr1 151497352 . A . PASS END=151497362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,37,255:16,0 chr1 151498118 . G . PASS END=151498122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 151498123 . T . PASS END=151498123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 151498124 . G . PASS END=151498124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151498125 . C . PASS END=151498125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 151498126 . A . PASS END=151498187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1152:0,86,255:37,0 chr1 151498188 . A . PASS END=151498188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 151498189 . G . PASS END=151498239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1133:0,82,255:35,0 chr1 151498240 . G . PASS END=151498256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,65,255:24,0 chr1 151498257 . C . PASS END=151498266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:17,0 chr1 151499451 . A . PASS END=151499583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,109,1746:0,109,255:40,0 chr1 151501826 . G . PASS END=151501830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 151501831 . G . PASS END=151501832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 151501833 . T . PASS END=151501833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 151501834 . C . PASS END=151501834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 151501835 . C . PASS END=151501835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151501836 . G . PASS END=151501862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1180:0,83,255:34,0 chr1 151501863 . A . PASS END=151501863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 151501864 . G . PASS END=151501902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1202:0,86,255:40,0 chr1 151501903 . G . PASS END=151501903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1238:0,76,255:39,0 chr1 151501904 . G . PASS END=151502023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:37:0,81,1215:0,98,255:40,0 chr1 151502024 . G . PASS END=151502024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:37:0,69,1035:0,111,255:23,0 chr1 151502025 . A . PASS END=151502025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1145:0,55,255:23,0 chr1 151502026 . G . PASS END=151502035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,71,255:23,0 chr1 151502385 . G . PASS END=151502395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,599:0,41,255:19,0 chr1 151502396 . G . PASS END=151502412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr1 151502413 . C . PASS END=151502413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 151502414 . A . PASS END=151502425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:24,0 chr1 151502426 . G . PASS END=151502558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,972:0,81,255:40,0 chr1 151502559 . G . PASS END=151502559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:33,0 chr1 151502560 . C . PASS END=151502575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,92,255:33,0 chr1 151502576 . G . PASS END=151502576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 151502577 . C . PASS END=151502591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 151502965 . G . LowGQ END=151502965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 151502966 . C G, 50.00 PASS DP=10;MQ=250.00;MQRankSum=2.450;ReadPosRankSum=1.453;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,5,0:0.500,0.000:10:3,2,0:2,3,0:48:85,0,50,179,179,358:200,0,161:5,0:5.0000e+01,6.5233e-05,5.3000e+01,1.7890e+02,2.1357e+02,3.6070e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,2,3:2,3,3,2 chr1 151502967 . A . LowGQ END=151502967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,333:6,0,255:10,0 chr1 151502968 . G . PASS END=151502968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 151502969 . A . LowGQ END=151502980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,321:0,0,255:12,0 chr1 151502981 . T . PASS END=151502981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 151502982 . G . LowGQ END=151502989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:13:0,0,396:0,0,255:13,0 chr1 151502990 . C . PASS END=151503003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr1 151503004 . C . PASS END=151503025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:19,0 chr1 151503026 . C . PASS END=151503031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 151503032 . C . PASS END=151503042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 151503043 . C . PASS END=151503048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 151503049 . G . PASS END=151503072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 151503073 . G . PASS END=151503074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151503075 . G . PASS END=151503075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:18,0 chr1 151503076 . C . PASS END=151503086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151503087 . G . PASS END=151503090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151503091 . C . PASS END=151503091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151503092 . A . PASS END=151503092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151503093 . G . PASS END=151503119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,831:0,69,255:25,0 chr1 151503120 . G . PASS END=151503120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 151503121 . G . PASS END=151503137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 151503138 . G . PASS END=151503138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 151503139 . C . PASS END=151503150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,764:0,63,255:22,0 chr1 151503151 . C . PASS END=151503155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151503156 . A . PASS END=151503156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151503157 . G . PASS END=151503177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 151503178 . C . PASS END=151503178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 151503179 . A . PASS END=151503180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 151503181 . A . PASS END=151503181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 151503182 . A . PASS END=151503195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,477:0,48,255:16,0 chr1 151503196 . A . PASS END=151503199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 151503200 . C . PASS END=151503210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 151503211 . C . PASS END=151503222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 151504878 . T . PASS END=151504879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 151504880 . G . PASS END=151504927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,519:0,42,255:18,0 chr1 151504928 . C . PASS END=151504928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 151504929 . C . PASS END=151504937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr1 151504938 . G . PASS END=151504944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 151504945 . A . PASS END=151504945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 151504946 . G . PASS END=151504960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 151504961 . G . PASS END=151504968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 151504969 . C . PASS END=151504971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151504972 . A . PASS END=151504991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,46,255:19,0 chr1 151504992 . G . PASS END=151504992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151504993 . A . PASS END=151504993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,676:0,19,255:19,0 chr1 151504994 . T . PASS END=151505003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 151505004 . G . PASS END=151505004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 151505005 . A . PASS END=151505005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:17,0 chr1 151505006 . G . PASS END=151505007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:18,0 chr1 151505008 . C . PASS END=151505008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:17,0 chr1 151505009 . T . PASS END=151505015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,653:0,43,255:18,0 chr1 151505016 . A . PASS END=151505016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,574:0,15,255:15,0 chr1 151505017 . C . PASS END=151505019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 151505020 . C . PASS END=151505022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 151505023 . G . PASS END=151505023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 151505024 . A . PASS END=151505025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 151505026 . G . PASS END=151505027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151505028 . C . PASS END=151505028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 151505029 . T . PASS END=151505029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151505030 . G . PASS END=151505030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 151505031 . A . PASS END=151505031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:13,0 chr1 151505032 . G . PASS END=151505035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,540:0,31,255:13,0 chr1 151505036 . A . PASS END=151505036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:11,0 chr1 151505037 . C . PASS END=151505039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 151505040 . C . PASS END=151505041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 151505042 . G . PASS END=151505042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 151505043 . G . PASS END=151505043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 151505044 . A . PASS END=151505044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 151505045 . T . PASS END=151505045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 151505046 . G . PASS END=151505046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 151505047 . A . PASS END=151505047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:10,0 chr1 151505048 . G . PASS END=151505048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 151506451 . A . PASS END=151506455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 151506456 . G . PASS END=151506456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 151506457 . A . PASS END=151506463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 151506464 . G . PASS END=151506468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 151506469 . G . PASS END=151506479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 151506480 . A . PASS END=151506480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 151506481 . T . PASS END=151506483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 151506484 . C . PASS END=151506484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 151506485 . A . PASS END=151506511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 151506512 . A . PASS END=151506515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 151506516 . A . PASS END=151506519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151506520 . C . PASS END=151506550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 151506551 . A . PASS END=151506562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151506563 . A . PASS END=151506564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 151506565 . A . PASS END=151506572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 151506573 . T . PASS END=151506573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 151506574 . T . PASS END=151506577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 151506578 . A . PASS END=151506578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 151506579 . G . PASS END=151506605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr1 151506606 . T . PASS END=151506606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 151506607 . C . PASS END=151506612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 151507518 . G . PASS END=151507542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:25,0 chr1 151507543 . A . PASS END=151507543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,750:0,44,255:22,0 chr1 151507544 . G . PASS END=151507545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 151507546 . T . PASS END=151507546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 151507547 . A . PASS END=151507548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 151507549 . A . PASS END=151507549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:23,0 chr1 151507550 . T . PASS END=151507563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 151507564 . C . PASS END=151507568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151507569 . G . PASS END=151507570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 151507571 . G . PASS END=151507585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 151507586 . G . PASS END=151507586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 151507587 . G . PASS END=151507589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151507590 . A . PASS END=151507600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,931:0,67,255:26,0 chr1 151507601 . G . PASS END=151507603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151507604 . C . PASS END=151507607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 151508076 . G . PASS END=151508083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 151508084 . G . PASS END=151508086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 151508087 . G . PASS END=151508098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,906:0,81,255:31,0 chr1 151508099 . C . PASS END=151508132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1162:0,89,255:35,0 chr1 151508133 . T . PASS END=151508133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr1 151508134 . G . PASS END=151508159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1065:0,83,255:34,0 chr1 151508256 . A . PASS END=151508365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:36:0,90,1350:0,92,255:40,0 chr1 151508366 . T . PASS END=151508366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:29,0 chr1 151508367 . G . PASS END=151508374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:31,0 chr1 151508713 . G . PASS END=151508821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1139:0,81,255:40,0 chr1 151509206 . C . PASS END=151509369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1105:0,85,255:40,0 chr1 151509681 . G . PASS END=151509691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:26,0 chr1 151509692 . C . PASS END=151509719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1105:0,85,255:34,0 chr1 151509720 . A . PASS END=151509720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1105:0,71,255:32,0 chr1 151509721 . A . PASS END=151509781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1234:0,81,255:40,0 chr1 151509782 . C . PASS END=151509782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 151509783 . A . PASS END=151509822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1164:0,83,255:38,0 chr1 151512843 . A . PASS END=151512843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 151512844 . T . PASS END=151512844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:28,0 chr1 151512845 . G . PASS END=151512848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,987:0,87,255:29,0 chr1 151512849 . G . PASS END=151512849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 151512850 . G . PASS END=151512857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:31,0 chr1 151512858 . A . PASS END=151512865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:31,0 chr1 151512866 . T . PASS END=151512866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:27,0 chr1 151512867 . A . PASS END=151512874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1166:0,85,255:30,0 chr1 151512875 . G . PASS END=151512875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 151512876 . G . PASS END=151512876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 151512877 . A . PASS END=151512877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 151512878 . C . PASS END=151512878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151512879 . G . PASS END=151512889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,76,255:26,0 chr1 151512890 . G . PASS END=151512890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 151512891 . G . PASS END=151512894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:24,0 chr1 151512895 . A G, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=3.203;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:6,7,0:5,7,0:48:85,0,49,501,360,861:255,0,255:9,0:5.0000e+01,7.0152e-05,5.2097e+01,4.5000e+02,3.9448e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,7,7:2,9,8,6 chr1 151512896 . G . PASS END=151512901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,930:0,62,255:23,0 chr1 151512902 . G . PASS END=151512902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 151513383 . A . PASS END=151513383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 151513384 . T . PASS END=151513385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 151534216 . A . PASS END=151534332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:30:0,80,1125:0,80,255:40,0 chr1 151534567 . G . PASS END=151534641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:47:0,95,1751:0,95,255:40,0 chr1 151535061 . G . PASS END=151535071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1288:0,94,255:36,0 chr1 151535072 . G . PASS END=151535158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1180:0,83,255:40,0 chr1 151535159 . T . PASS END=151535159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 151535160 . A . PASS END=151535162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 151536380 . G . PASS END=151536444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,102,1322:0,104,255:40,0 chr1 151536445 . T . PASS END=151536445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 151536446 . G . PASS END=151536466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1395:0,102,255:35,0 chr1 151537001 . G . PASS END=151537090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,149,255:40,0 chr1 151538639 . G . PASS END=151538639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 151538640 . T . PASS END=151538640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:21,0 chr1 151538641 . G . PASS END=151538659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,653:0,66,255:23,0 chr1 151538660 . G . PASS END=151538660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 151538661 . G . PASS END=151538675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:26,0 chr1 151538676 . C . PASS END=151538676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 151538677 . C . PASS END=151538693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:24,0 chr1 151538694 . G . PASS END=151538694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 151538695 . C . PASS END=151538704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 151542133 . G . PASS END=151542136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1243:0,102,255:34,0 chr1 151542137 . A . PASS END=151542146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,99,1280:0,102,255:39,0 chr1 151542147 . A . PASS END=151542147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1374:0,54,255:38,0 chr1 151542148 . A . PASS END=151542246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1221:0,91,255:40,0 chr1 151546746 . G . PASS END=151546874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:41:0,85,1504:0,85,255:40,0 chr1 151547387 . G . PASS END=151547388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151547389 . G . PASS END=151547389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:26,0 chr1 151547390 . C . PASS END=151547396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 151547397 . C . PASS END=151547397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 151547398 . C . PASS END=151547403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 151547404 . G . PASS END=151547404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 151547405 . G . PASS END=151547423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1093:0,80,255:32,0 chr1 151547424 . A . PASS END=151547424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:32,0 chr1 151547425 . G . PASS END=151547425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 151547426 . G . PASS END=151547426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:30,0 chr1 151547427 . T . PASS END=151547436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1125:0,82,255:32,0 chr1 151547437 . G . PASS END=151547437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:29,0 chr1 151547438 . G . PASS END=151547452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 151547453 . A . PASS END=151547453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 151547454 . A . PASS END=151547458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 151547459 . G . PASS END=151547465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 151547466 . A . PASS END=151547468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151547469 . C . PASS END=151547477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 151547478 . A . PASS END=151547478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:22,0 chr1 151547479 . A . PASS END=151547481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 151551197 . G . PASS END=151551282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,117,1759:0,117,255:40,0 chr1 151551283 . T . PASS END=151551302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,105,1575:0,116,255:40,0 chr1 151552125 . C . PASS END=151552126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 151552127 . C . PASS END=151552127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:30,0 chr1 151552128 . C . PASS END=151552130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 151552131 . A . PASS END=151552131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1024:0,46,255:29,0 chr1 151552132 . A . PASS END=151552132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 151552133 . T . PASS END=151552133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 151552134 . T . PASS END=151552167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:31:0,88,1095:0,88,255:35,0 chr1 151552168 . T . PASS END=151552168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:33,0 chr1 151552169 . C . PASS END=151552205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1144:0,85,255:34,0 chr1 151552206 . G . PASS END=151552208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1125:0,69,255:26,0 chr1 151553418 . A . PASS END=151553426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 151553427 . A . PASS END=151553427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:28,0 chr1 151553428 . T . PASS END=151553441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 151553442 . G . PASS END=151553442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 151553443 . A . PASS END=151553445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 151553446 . A . PASS END=151553446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:28,0 chr1 151553447 . C . PASS END=151553447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151553448 . C . PASS END=151553448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 151553449 . T . PASS END=151553454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1164:0,93,255:32,0 chr1 151553455 . A . PASS END=151553455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1045:0,63,255:30,0 chr1 151553456 . A . PASS END=151553458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:32,0 chr1 151553459 . A . PASS END=151553459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1025:0,63,255:29,0 chr1 151553460 . C . PASS END=151553464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 151553465 . C . PASS END=151553471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 151553472 . G . PASS END=151553474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 151553475 . A . PASS END=151553476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151553477 . C . PASS END=151553484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 151553485 . C . PASS END=151553485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151553486 . C . PASS END=151553488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 151553489 . G . PASS END=151553504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,64,255:25,0 chr1 151553505 . G . PASS END=151553505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 151553506 . A . PASS END=151553508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 151553509 . A . PASS END=151553509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 151553510 . C . PASS END=151553511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 151553512 . C . PASS END=151553518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 151554120 . T . PASS END=151554183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,106,1407:0,106,255:40,0 chr1 151554577 . A . PASS END=151554589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,168,255:40,0 chr1 151584678 . A . PASS END=151584703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,568:0,51,255:19,0 chr1 151584704 . T . PASS END=151584722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 151584723 . A . PASS END=151584769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,44,255:19,0 chr1 151584770 . C . PASS END=151584771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 151584772 . G . PASS END=151584777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151584778 . G . PASS END=151584778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151584779 . C . PASS END=151584783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151584784 . G . PASS END=151584787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151584788 . A . PASS END=151584798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 151584799 . C . PASS END=151584799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:17,0 chr1 151584800 . G . PASS END=151584803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151584804 . G . PASS END=151584820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 151584821 . G . PASS END=151584821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 151584822 . T . PASS END=151584823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr1 151584824 . C . PASS END=151584824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 151584825 . G . PASS END=151584825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 151584826 . A . PASS END=151584826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 151584827 . G . PASS END=151584843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:25,0 chr1 151584844 . A . PASS END=151584846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,693:0,41,255:23,0 chr1 151584847 . T . PASS END=151584850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 151584851 . G . PASS END=151584851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 151584852 . G . PASS END=151584866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 151584867 . G . PASS END=151584867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:23,0 chr1 151584868 . G . PASS END=151584884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,854:0,61,255:25,0 chr1 151584885 . A . PASS END=151584885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 151584886 . T . PASS END=151584892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,74,255:23,0 chr1 151584893 . G . PASS END=151584893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 151584894 . G . PASS END=151584894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 151584895 . A . PASS END=151584896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:19,0 chr1 151584897 . C . PASS END=151584906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 151584907 . C . PASS END=151584907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 151584908 . G . PASS END=151584913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 151584914 . G . PASS END=151584914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 151584915 . C . PASS END=151584915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151584916 . A . PASS END=151584916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 151584917 . T . PASS END=151584922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151584923 . C . PASS END=151584923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 151584924 . G . PASS END=151584929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 151584930 . C . PASS END=151584952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,584:0,44,255:17,0 chr1 151584953 . G . PASS END=151584974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,396:0,33,255:13,0 chr1 151584975 . C . PASS END=151584975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 151584976 . G . PASS END=151584978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 151584979 . T . PASS END=151584988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 151611364 . G . PASS END=151611595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1260:0,88,255:40,0 chr1 151611601 . T . PASS END=151611601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr1 151630711 . G . PASS END=151630715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr1 151630716 . T . PASS END=151630716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 151630717 . A . PASS END=151630717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 151630718 . A . PASS END=151630742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:22,0 chr1 151630743 . G . PASS END=151630744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 151630745 . G . PASS END=151630783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1025:0,80,255:36,0 chr1 151630784 . A . PASS END=151630784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:31,0 chr1 151630785 . C . PASS END=151630858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1103:0,92,255:39,0 chr1 151630859 . A . PASS END=151630859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:27,0 chr1 151630860 . A . PASS END=151630864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1219:0,88,255:30,0 chr1 151630865 . A . PASS END=151630865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:28,0 chr1 151630866 . T . PASS END=151630873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1158:0,96,255:32,0 chr1 151630874 . G . PASS END=151630874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:31,0 chr1 151630875 . T . PASS END=151630882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1158:0,96,255:32,0 chr1 151630883 . T . PASS END=151630883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:27,0 chr1 151630884 . G . PASS END=151630885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 151630886 . A . PASS END=151630894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,76,255:26,0 chr1 151630895 . T . PASS END=151630895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:24,0 chr1 151630896 . A . PASS END=151630903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1035:0,71,255:26,0 chr1 151633274 . T . PASS END=151633338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:61:0,120,1800:0,147,255:40,0 chr1 151634642 . A . PASS END=151634732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:29:0,86,1078:0,86,255:40,0 chr1 151634733 . A . PASS END=151634746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:64:27:0,64,909:0,64,255:26,0 chr1 151638409 . G . PASS END=151638487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,120,1800:0,121,255:40,0 chr1 151640948 . T . PASS END=151640975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1213:0,88,255:37,0 chr1 151640976 . T . PASS END=151640976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1349:0,73,255:37,0 chr1 151640977 . C . PASS END=151641082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:40:0,87,1424:0,87,255:40,0 chr1 151641083 . A . PASS END=151641083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1339:0,51,255:32,0 chr1 151641084 . C . PASS END=151641110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1247:0,86,255:33,0 chr1 151641111 . G . PASS END=151641111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 151641617 . A . PASS END=151641727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:98:64:0,98,1800:0,98,255:40,0 chr1 151655829 . T . PASS END=151655829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 151655832 . G . PASS END=151655921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:51:0,120,1800:0,127,255:40,0 chr1 151664908 . T . PASS END=151664908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151664911 . T . PASS END=151664911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,861:0,34,255:25,0 chr1 151664912 . A . PASS END=151664912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:28,0 chr1 151664913 . C . PASS END=151664915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:34,0 chr1 151664916 . C . PASS END=151664916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1141:0,72,255:33,0 chr1 151664917 . A . PASS END=151664918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1258:0,105,255:35,0 chr1 151664919 . C . PASS END=151664919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1121:0,58,255:33,0 chr1 151664920 . A . PASS END=151664958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:96:35:0,96,1274:0,96,255:40,0 chr1 151664959 . C . PASS END=151665060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:37:0,84,1305:0,84,255:40,0 chr1 151665387 . A . PASS END=151665509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:40:0,81,1215:0,90,255:40,0 chr1 151665510 . C . PASS END=151665515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:66:39:0,66,990:0,87,255:23,0 chr1 151665900 . T . PASS END=151665959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:33:0,99,1219:0,99,255:40,0 chr1 151666020 . G . PASS END=151666088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1199:0,94,255:40,0 chr1 151666846 . A . PASS END=151666879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,114,1628:0,116,255:40,0 chr1 151666880 . A . LowGQ END=151666880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:46:0,0,1202:1,0,255:37,0 chr1 151666881 . T . PASS END=151666893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:40,0 chr1 151677517 . T . PASS END=151677533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,620:0,48,255:19,0 chr1 151677534 . C . PASS END=151677559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:26,0 chr1 151677560 . T . PASS END=151677562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 151677563 . A . PASS END=151677571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 151677572 . A . PASS END=151677589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1046:0,87,255:29,0 chr1 151677590 . T . PASS END=151677590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 151677591 . T . PASS END=151677593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:29,0 chr1 151677594 . T . PASS END=151677594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 151677595 . G . PASS END=151677602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 151677603 . T . PASS END=151677641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,62,255:24,0 chr1 151677642 . A . PASS END=151677642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,584:0,30,255:18,0 chr1 151677643 . G . PASS END=151677644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151678298 . C . PASS END=151678305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1211:0,99,255:33,0 chr1 151678306 . T . PASS END=151678306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr1 151678307 . T . PASS END=151678321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:33,0 chr1 151678322 . C . PASS END=151678322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:29,0 chr1 151678323 . T . PASS END=151678347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1117:0,82,255:35,0 chr1 151678348 . A . PASS END=151678348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:34,0 chr1 151678349 . T . PASS END=151678380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1355:0,95,255:37,0 chr1 151678381 . A . PASS END=151678381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr1 151678382 . T . PASS END=151678411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1173:0,81,255:34,0 chr1 151678412 . G . PASS END=151678412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 151678413 . G . PASS END=151678422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 151678423 . A . PASS END=151678429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:26,0 chr1 151678430 . A . PASS END=151678440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,56,255:19,0 chr1 151678441 . C . PASS END=151678441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 151678700 . C . PASS END=151678707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 151678708 . T . PASS END=151678708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 151678709 . G . PASS END=151678721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 151678722 . T . PASS END=151678722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,2 chr1 151678723 . T . PASS END=151678723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,1022:0,10,255:27,2 chr1 151678724 . G . PASS END=151678725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:27:32:0,27,1071:0,27,255:28,2 chr1 151678726 . T . PASS END=151678726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 151678727 . G . PASS END=151678791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,83,255:36,0 chr1 151678792 . T . PASS END=151678792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 151678793 . G . PASS END=151678800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 151678801 . G . PASS END=151678811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:22,0 chr1 151678812 . C . PASS END=151678823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 151678824 . T . PASS END=151678837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:13:0,33,495:0,39,255:13,0 chr1 151679145 . C . PASS END=151679151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,540:0,31,255:13,0 chr1 151679152 . G . PASS END=151679172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,544:0,48,255:16,0 chr1 151679173 . C . PASS END=151679182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 151679183 . G . PASS END=151679188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 151679189 . A . PASS END=151679210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 151679621 . C . PASS END=151679625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr1 151679626 . T . PASS END=151679627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 151679628 . G . PASS END=151679629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 151679630 . G . PASS END=151679654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr1 151679655 . A . PASS END=151679686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 151679687 . G . PASS END=151679741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,553:0,45,255:19,0 chr1 151679742 . G . PASS END=151679742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 151679743 . G . PASS END=151679770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 151679983 . C . PASS END=151680000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:12,0 chr1 151680001 . G . PASS END=151680023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 151680024 . T . PASS END=151680024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 151680025 . T . PASS END=151680028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 151680029 . G . PASS END=151680035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 151680036 . A . PASS END=151680036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 151680037 . T . PASS END=151680076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 151680077 . G . PASS END=151680078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 151680079 . G . PASS END=151680090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr1 151680091 . G . PASS END=151680121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,202:6,0 chr1 151680122 . C . PASS END=151680124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:6:0,6,90:0,18,210:2,0 chr1 151680268 . G . PASS END=151680287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr1 151680288 . A . PASS END=151680288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 151680289 . G . PASS END=151680299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 151680300 . G . PASS END=151680300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 151680301 . G . PASS END=151680309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:17,0 chr1 151680310 . G . PASS END=151680310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 151680311 . G . PASS END=151680325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:18,0 chr1 151680326 . A . PASS END=151680326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 151680327 . A . PASS END=151680375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,645:0,51,255:18,0 chr1 151680376 . G . PASS END=151680376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 151680377 . T . PASS END=151680386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 151680387 . T . PASS END=151680398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 151680399 . T . PASS END=151680399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 151680400 . G . PASS END=151680411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 151681474 . T . PASS END=151681553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1133:0,82,255:38,0 chr1 151681696 . C . PASS END=151681706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,967:0,65,255:26,0 chr1 151681707 . C . PASS END=151681712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 151681713 . G . PASS END=151681713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 151681714 . G . PASS END=151681715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1067:0,52,255:29,1 chr1 151681716 . C . PASS END=151681716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:29,0 chr1 151681717 . C . PASS END=151681780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:30:0,86,1147:0,86,255:36,0 chr1 151681781 . T . PASS END=151681781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 151681782 . G . PASS END=151681790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:29,0 chr1 151681791 . T . PASS END=151681791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 151681792 . T . PASS END=151681798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 151681799 . C . PASS END=151681799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 151681800 . A . PASS END=151681808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 151681809 . A . PASS END=151681809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 151681810 . A . PASS END=151681817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 151681818 . C . PASS END=151681824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:23,0 chr1 151682219 . C . PASS END=151682267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1197:0,86,255:35,0 chr1 151686985 . A . PASS END=151686991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 151686992 . G . PASS END=151686992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151686993 . T . PASS END=151686993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr1 151686994 . G . PASS END=151686995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151686996 . C . PASS END=151686996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 151686997 . A . PASS END=151687000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 151687001 . G . PASS END=151687004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 151687005 . G . PASS END=151687005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151687070 . C . PASS END=151687078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 151687079 . C . PASS END=151687079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 151687080 . G . PASS END=151687081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 151687082 . C . PASS END=151687082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:29,0 chr1 151687083 . T . PASS END=151687084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 151687085 . C . PASS END=151687085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:30,0 chr1 151687086 . T . PASS END=151687088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151687089 . T . PASS END=151687090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 151687091 . G . PASS END=151687091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 151687092 . T . PASS END=151687093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 151687094 . C . PASS END=151687094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 151687095 . A . PASS END=151687102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,76,255:26,0 chr1 151687103 . C . PASS END=151687103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,980:0,46,255:24,0 chr1 151687104 . T . PASS END=151687108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,76,255:25,0 chr1 151687109 . C . PASS END=151687109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,861:0,20,255:23,0 chr1 151687110 . T . PASS END=151687112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 151687113 . A . PASS END=151687113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,809:0,34,255:24,0 chr1 151687114 . G . PASS END=151687115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 151687116 . G . PASS END=151687118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151687119 . G . PASS END=151687119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 151687120 . A . PASS END=151687120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151687121 . A . PASS END=151687121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:25,0 chr1 151687122 . T . PASS END=151687122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,856:0,51,255:24,0 chr1 151687123 . C . PASS END=151687130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,864:0,64,255:26,0 chr1 151687131 . C . PASS END=151687131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,817:0,34,255:22,0 chr1 151687132 . A . PASS END=151687132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,815:0,45,255:21,0 chr1 151687133 . G . PASS END=151687133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,753:0,28,255:20,0 chr1 151687134 . T . PASS END=151687134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 151687135 . A . PASS END=151687135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,806:0,31,255:21,0 chr1 151687136 . T . PASS END=151687139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:24,0 chr1 151687140 . A . PASS END=151687141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,817:0,44,255:23,0 chr1 151687142 . G . PASS END=151687142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,74,255:24,0 chr1 151687143 . A . PASS END=151687143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 151687144 . A . PASS END=151687145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 151687146 . G . PASS END=151687147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 151687148 . A . PASS END=151687148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 151687149 . C . PASS END=151687150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:21,0 chr1 151687151 . T . PASS END=151687152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 151688095 . C . PASS END=151688098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,214,255:40,0 chr1 151688352 . C . PASS END=151688487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1319:0,95,255:40,0 chr1 151688488 . C . PASS END=151688488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:29,0 chr1 151688489 . T . PASS END=151688491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,91,255:30,0 chr1 151688492 . T . PASS END=151688492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:27,0 chr1 151688493 . T . PASS END=151688496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,89,255:28,0 chr1 151689231 . C . PASS END=151689232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 151689233 . G . PASS END=151689233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 151689234 . G . PASS END=151689246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 151689247 . T . PASS END=151689248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 151689249 . C . PASS END=151689250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 151689251 . C . PASS END=151689251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 151689252 . T . PASS END=151689252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 151689253 . C . PASS END=151689253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,390:0,8,255:11,0 chr1 151689254 . C . PASS END=151689254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:11,0 chr1 151689255 . G . PASS END=151689263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,354:0,36,255:12,0 chr1 151689264 . C . PASS END=151689265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 151689266 . C . PASS END=151689266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:9,0 chr1 151689267 . C . PASS END=151689267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 151689268 . T . PASS END=151689268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 151689269 . C . PASS END=151689269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 151689270 . A . PASS END=151689274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 151692072 . A . PASS END=151692164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:94:40:0,94,1534:0,94,255:40,0 chr1 151694013 . A . PASS END=151694013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 151694014 . T . PASS END=151694025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr1 151694026 . C . PASS END=151694041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 151694042 . G . PASS END=151694042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 151694043 . C . PASS END=151694043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 151694044 . C . PASS END=151694046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 151694047 . A . PASS END=151694056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151694057 . G . PASS END=151694059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr1 151694060 . T . PASS END=151694061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151694062 . G . PASS END=151694076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 151694077 . A . PASS END=151694077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 151694078 . G . PASS END=151694087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 151694088 . A . PASS END=151694096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 151694562 . A . PASS END=151694638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,113,1800:0,113,255:40,0 chr1 151700051 . A . PASS END=151700097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,105,1453:0,105,255:40,0 chr1 151701242 . A . PASS END=151701307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,177,255:40,0 chr1 151701308 . C . PASS END=151701312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,179,255:40,0 chr1 151732526 . T . PASS END=151732528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 151732529 . G . PASS END=151732529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr1 151732530 . A . PASS END=151732540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr1 151732541 . G . PASS END=151732544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 151732545 . G . PASS END=151732546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151732547 . G . PASS END=151732547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151732548 . G . PASS END=151732554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 151732555 . C . PASS END=151732579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1054:0,84,255:33,0 chr1 151732580 . G . PASS END=151732580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:31,0 chr1 151732581 . T . PASS END=151732631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1233:0,86,255:36,0 chr1 151732632 . A . PASS END=151732657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,63,255:28,0 chr1 151733292 . C . PASS END=151733297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1195:0,88,255:34,0 chr1 151733298 . C . PASS END=151733334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:35:0,82,1294:0,82,255:39,0 chr1 151733335 . T G, 48.62 PASS DP=40;MQ=248.55;MQRankSum=4.733;ReadPosRankSum=0.629;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,17,0:0.425,0.000:40:12,7,0:11,10,0:46:83,0,47,183,183,183:255,0,255:19,0:4.8619e+01,1.0303e-04,5.0000e+01,1.8339e+02,2.1816e+02,1.8640e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,12,6,11:14,9,6,11 chr1 151733336 . C . PASS END=151733340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:84:43:0,84,1260:0,90,255:29,0 chr1 151733341 . A . PASS END=151733351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:40:0,60,900:0,73,255:24,0 chr1 151733352 . A . PASS END=151733360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:45:36:0,45,675:0,78,255:19,0 chr1 151733361 . A . PASS END=151733365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:33:34:0,33,495:0,85,255:12,0 chr1 151733366 . C . PASS END=151733370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:24:33:0,24,360:0,83,255:9,0 chr1 151733371 . C . PASS END=151733374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:15:30:0,15,225:0,40,255:6,0 chr1 151733375 . G . PASS END=151733375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:9:29:0,9,135:0,54,255:3,1 chr1 151733927 . A . PASS END=151733929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:90:42:0,90,1326:0,90,255:40,0 chr1 151733930 . C . PASS END=151733930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1325:0,66,255:40,0 chr1 151733931 . T . PASS END=151733935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:44:0,93,1515:0,93,255:40,0 chr1 151733936 . G . PASS END=151733936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1380:0,69,255:40,0 chr1 151733937 . A . PASS END=151733947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,101,1328:0,101,255:40,0 chr1 151733948 . A . PASS END=151733948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:73:46:0,73,1334:0,73,255:40,0 chr1 151733949 . A . PASS END=151733950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,122,255:40,0 chr1 151733951 . T . PASS END=151733951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:40:46:0,40,1216:0,40,255:40,0 chr1 151733952 . A . PASS END=151733952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:60:47:0,60,1413:0,60,255:40,0 chr1 151733953 . T . PASS END=151733955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr1 151733956 . C . PASS END=151733956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:63:48:0,63,1312:0,63,255:40,0 chr1 151733957 . A . PASS END=151733989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:48:0,101,1646:0,101,255:40,0 chr1 151733990 . C . PASS END=151733990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:70:51:0,70,1574:0,70,255:40,0 chr1 151733991 . C . PASS END=151734025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:90:42:0,90,1383:0,90,255:40,0 chr1 151734026 . T . PASS END=151734026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1236:0,62,255:34,0 chr1 151734027 . G . PASS END=151734027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 151734028 . T . PASS END=151734028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1413:0,79,255:36,0 chr1 151734438 . C . PASS END=151734501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:32:0,82,1093:0,82,255:40,0 chr1 151734581 . C . PASS END=151734631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,174,255:40,0 chr1 151734852 . C . PASS END=151734867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 151734868 . A . PASS END=151734869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,791:0,58,255:23,0 chr1 151734870 . C . PASS END=151734877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:23,0 chr1 151734878 . T . PASS END=151734878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:21,0 chr1 151734879 . G . PASS END=151734890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:24,0 chr1 151734891 . T . PASS END=151734891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 151734892 . G . PASS END=151734893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 151734894 . A . PASS END=151734905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1080:0,84,255:29,0 chr1 151734906 . T . PASS END=151734906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 151734907 . C . PASS END=151734907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 151734908 . C . PASS END=151734908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 151734909 . C . PASS END=151734918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1141:0,83,255:33,0 chr1 151734919 . A . PASS END=151734919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 151734920 . G . PASS END=151734926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr1 151734927 . C . PASS END=151734927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,957:0,65,255:28,0 chr1 151734928 . C . PASS END=151734940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,967:0,80,255:30,0 chr1 151734941 . T . PASS END=151734941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 151734942 . C . PASS END=151734948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 151734949 . G . PASS END=151734952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1041:0,73,255:25,0 chr1 151734953 . C . PASS END=151734953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:23,0 chr1 151734954 . C . PASS END=151734966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,70,255:24,0 chr1 151734967 . A . PASS END=151734967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,780:0,58,255:19,0 chr1 151734968 . C . PASS END=151734975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 151734976 . T . PASS END=151734976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,726:0,58,255:20,0 chr1 151735426 . C . PASS END=151735426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 151735427 . G . PASS END=151735427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 151735428 . G . PASS END=151735432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr1 151735433 . G . PASS END=151735450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1103:0,84,255:30,0 chr1 151735451 . C . PASS END=151735451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 151735452 . G . PASS END=151735455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr1 151735456 . C . PASS END=151735456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 151735457 . G . PASS END=151735476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:36,0 chr1 151735477 . T . PASS END=151735477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1240:0,75,255:33,0 chr1 151735478 . G . PASS END=151735557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:37,0 chr1 151735558 . A . PASS END=151735558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 151735559 . G . PASS END=151735562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151735563 . C . PASS END=151735563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 151735564 . G . PASS END=151735567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 151735568 . T . PASS END=151735582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 151735583 . C . PASS END=151735586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 151735587 . C . PASS END=151735591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1123:0,77,255:26,0 chr1 151735592 . C . PASS END=151735597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 151735598 . A . PASS END=151735607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr1 151735608 . C . PASS END=151735609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 151735610 . C . PASS END=151735611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:21,0 chr1 151735612 . A . PASS END=151735643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:14:0,40,504:0,40,255:19,0 chr1 151735803 . C . PASS END=151735803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 151735804 . C . PASS END=151735806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 151735807 . T . PASS END=151735829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,698:0,47,255:19,0 chr1 151735830 . G . PASS END=151735843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr1 151735844 . C . PASS END=151735844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 151735845 . G . PASS END=151735856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,825:0,72,255:24,0 chr1 151735857 . T . PASS END=151735857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 151735858 . C . PASS END=151735868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:25,0 chr1 151735869 . T . PASS END=151735869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:23,0 chr1 151735870 . A . PASS END=151735871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:25,0 chr1 151735872 . C . PASS END=151735872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151735873 . T . PASS END=151735873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 151735874 . C . PASS END=151735875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 151735876 . T . PASS END=151735876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:26,0 chr1 151735877 . G . PASS END=151735879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151735880 . C . PASS END=151735910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:26,0 chr1 151735911 . C . PASS END=151735913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 151735914 . C . PASS END=151735919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:23,0 chr1 151735920 . A . PASS END=151735920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,914:0,34,255:21,0 chr1 151735921 . G . PASS END=151735933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr1 151735934 . C . PASS END=151735937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151735938 . G . PASS END=151735938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 151735939 . A . PASS END=151735943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1035:0,87,255:29,0 chr1 151735944 . G . PASS END=151735944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 151735945 . G . PASS END=151735955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:31,0 chr1 151735971 . A . PASS END=151735988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 151735989 . C . PASS END=151735989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 151735990 . C . PASS END=151735991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 151735992 . C . PASS END=151735992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 151735993 . G . PASS END=151736013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1164:0,93,255:31,0 chr1 151736014 . C . PASS END=151736024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 151736025 . C . PASS END=151736032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151736033 . G . PASS END=151736033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151736034 . G . PASS END=151736036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 151736037 . C . PASS END=151736041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 151739198 . C . PASS END=151739361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:34:0,85,1156:0,85,255:40,0 chr1 151739362 . A . PASS END=151739362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1062:0,69,255:29,0 chr1 151739363 . A . PASS END=151739364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 151739639 . C . PASS END=151739775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:36:0,92,1311:0,92,255:40,0 chr1 151740534 . G . PASS END=151740542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 151740543 . T . PASS END=151740543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 151740544 . T . PASS END=151740547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 151740548 . G . PASS END=151740548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 151740549 . G . PASS END=151740555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 151740556 . C . PASS END=151740628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1241:0,89,255:38,0 chr1 151740629 . C . PASS END=151740665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1226:0,89,255:35,0 chr1 151740666 . T C, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,17,0:0,20,0:108:196,111,0,1434,111,1434:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,23:0,0,16,21 chr1 151740667 . T . PASS END=151740673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:32:0,81,1215:0,88,255:29,0 chr1 151740674 . C . PASS END=151740692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,926:0,64,255:26,0 chr1 151740693 . C . PASS END=151740693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 151740694 . A . PASS END=151740703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 151740704 . G . PASS END=151740706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 151740707 . A . PASS END=151740709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 151742648 . T . PASS END=151742733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,148,255:40,0 chr1 151743553 . G . PASS END=151743567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 151743568 . C . PASS END=151743568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 151743569 . C . PASS END=151743570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 151743571 . T . PASS END=151743571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 151743572 . C . PASS END=151743574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 151743575 . C . PASS END=151743575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 151743576 . T . PASS END=151743578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151743579 . A . PASS END=151743579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 151743580 . T . PASS END=151743581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 151743582 . G . PASS END=151743582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151743583 . G . PASS END=151743583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 151743584 . C . PASS END=151743675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 151743676 . T . PASS END=151743676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 151743677 . G . PASS END=151743695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr1 151744367 . T . PASS END=151744370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 151744371 . G . PASS END=151744462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1023:0,81,255:40,0 chr1 151746889 . A . PASS END=151746980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:68:0,120,1800:0,160,255:40,0 chr1 151747186 . C . PASS END=151747282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:43:0,82,1471:0,82,255:40,0 chr1 151747541 . C . PASS END=151747642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,106,1800:0,106,255:40,0 chr1 151747868 . C . PASS END=151747932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,107,1800:0,107,255:40,0 chr1 151747933 . T . PASS END=151747969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,154,255:40,0 chr1 151747970 . A G, 48.91 PASS DP=61;MQ=250.00;MQRankSum=6.658;ReadPosRankSum=2.156;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,27,0:0.443,0.000:61:13,11,0:21,16,0:47:84,0,50,956,1170,2127:255,0,255:29,0:4.8912e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,18,10,17:19,15,14,13 chr1 151747971 . T . PASS END=151748007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,120,1800:0,121,255:40,0 chr1 151748008 . C . PASS END=151748019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,119,1651:0,119,255:40,0 chr1 151748296 . C . PASS END=151748360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,139,255:40,0 chr1 151748572 . C . PASS END=151748744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:32:0,87,1181:0,88,255:40,0 chr1 151748915 . C . PASS END=151748915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 151748916 . A . PASS END=151748922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 151748923 . T . PASS END=151748923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 151748924 . C . PASS END=151748931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1202:0,84,255:32,0 chr1 151748932 . G . PASS END=151748932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1119:0,47,255:31,0 chr1 151748933 . C . PASS END=151749058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1195:0,84,255:40,0 chr1 151749059 . G . PASS END=151749075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,78,255:25,0 chr1 151751161 . T . PASS END=151751176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:70:25:0,70,917:0,70,255:28,0 chr1 151751177 . C . PASS END=151751183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr1 151751184 . A . PASS END=151751185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 151751186 . G . PASS END=151751205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:29,0 chr1 151751206 . G . PASS END=151751206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 151751207 . A . PASS END=151751482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1088:0,87,255:40,0 chr1 151751579 . C . PASS END=151751718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,103,1731:0,103,255:40,0 chr1 151752427 . C . PASS END=151752430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 151752431 . G . PASS END=151752431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 151752432 . A . PASS END=151752565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:30:0,86,1117:0,86,255:40,0 chr1 151752566 . G . PASS END=151752566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:29,0 chr1 151752567 . C . PASS END=151752569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:38:0,87,1305:0,98,255:30,0 chr1 151752570 . A . PASS END=151752570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:28,0 chr1 151752571 . C . PASS END=151752576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,83,255:27,0 chr1 151752577 . C . PASS END=151752580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:24,0 chr1 151752581 . G . PASS END=151752585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,855:0,70,255:19,0 chr1 151752586 . C . PASS END=151752587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,900:0,77,255:20,0 chr1 151752588 . T . PASS END=151752588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 151752589 . C . PASS END=151752589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 151752590 . A . PASS END=151752611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,47,255:18,0 chr1 151752612 . C . PASS END=151752612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 151752613 . G . PASS END=151752615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 151752616 . G . PASS END=151752616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 151753957 . C . PASS END=151754063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:41:0,108,1446:0,112,255:40,0 chr1 151754443 . C . PASS END=151754495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:39:0,96,1443:0,96,255:40,0 chr1 151755375 . C . PASS END=151755396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:25,0 chr1 151755397 . G . PASS END=151755400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 151755401 . A . PASS END=151755401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 151755402 . G . PASS END=151755437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1183:0,86,255:36,0 chr1 151755438 . G . PASS END=151755438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 151755439 . G . PASS END=151755492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1282:0,90,255:35,0 chr1 151755493 . A . PASS END=151755498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,986:0,70,255:25,0 chr1 151773399 . T . PASS END=151773406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 151773407 . G . PASS END=151773433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:26,0 chr1 151773434 . A . PASS END=151773434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:24,0 chr1 151773435 . G . PASS END=151773443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,901:0,62,255:26,0 chr1 151773444 . C . PASS END=151773444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:24,0 chr1 151773445 . C . PASS END=151773450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 151773451 . G . PASS END=151773451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:24,0 chr1 151773452 . G . PASS END=151773471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 151773472 . A . PASS END=151773472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 151773473 . A . PASS END=151773486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 151773487 . T . PASS END=151773487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 151773488 . T . PASS END=151773519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:22:0,61,766:0,61,255:24,0 chr1 151773520 . A . PASS END=151773520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 151773521 . T . PASS END=151773529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 151773530 . A . PASS END=151773536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,715:0,49,255:20,0 chr1 151773537 . G . PASS END=151773539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 151773540 . C . PASS END=151773540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 151773541 . A . PASS END=151773550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 151773551 . G . PASS END=151773551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 151773552 . G . PASS END=151773552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 151773553 . A . PASS END=151773553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 151773554 . A . PASS END=151773558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 151773559 . A . PASS END=151773559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 151773560 . G . PASS END=151773566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 151773567 . G . PASS END=151773570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,59,255:19,0 chr1 151773571 . G . PASS END=151773594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 151773595 . C . PASS END=151773595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,943:0,51,255:25,0 chr1 151773596 . T . PASS END=151773644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 151773645 . A . PASS END=151773645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 151773646 . G . PASS END=151773658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:23,0 chr1 151773659 . T . PASS END=151773659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 151773660 . T . PASS END=151773677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr1 151773678 . G . PASS END=151773686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 151773687 . C . PASS END=151773762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,846:0,62,255:26,0 chr1 151773763 . G . PASS END=151773766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 151773767 . G . PASS END=151773797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,71,255:26,0 chr1 151773798 . T . PASS END=151773798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 151773799 . A . PASS END=151773880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,809:0,62,255:25,0 chr1 151773881 . A . PASS END=151773881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:22,0 chr1 151773882 . G . PASS END=151773888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,930:0,72,255:24,0 chr1 151773889 . G . PASS END=151773889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr1 151773890 . C . PASS END=151773891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 151773892 . T . PASS END=151773892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 151773893 . G . PASS END=151773896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 151773897 . G . PASS END=151773897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 151773898 . C . PASS END=151773916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:23,0 chr1 151773917 . A . PASS END=151773928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,751:0,50,255:19,0 chr1 151773929 . A . PASS END=151773932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr1 151773933 . T . PASS END=151773947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr1 151773948 . T . PASS END=151773948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,584:0,26,255:17,0 chr1 151773949 . T . PASS END=151773966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 151773967 . G . PASS END=151773967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 151773968 . G . PASS END=151773976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 151773977 . T . PASS END=151773979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,540:0,32,255:13,0 chr1 151773980 . C . PASS END=151773982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 151773983 . A . PASS END=151773983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 151773984 . A . PASS END=151773985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 151773986 . A . PASS END=151773999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 151774000 . T . PASS END=151774000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 151774001 . T . PASS END=151774009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:12,0 chr1 151774010 . C . PASS END=151774010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 151774011 . A . PASS END=151774011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 151774012 . T . PASS END=151774012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 151774013 . G . PASS END=151774020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 151774021 . C . PASS END=151774023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 151774024 . G . PASS END=151774027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 151774028 . A . PASS END=151774032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 151774033 . G . PASS END=151774065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 151774066 . A . PASS END=151774122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,520:0,40,255:19,0 chr1 151774123 . A . PASS END=151774123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:18,0 chr1 151774124 . A . PASS END=151774126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 151774127 . T . PASS END=151774129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151774130 . C . PASS END=151774130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 151774131 . C . PASS END=151774137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,626:0,63,255:21,0 chr1 151774138 . T . PASS END=151774138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 151774139 . C . PASS END=151774144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 151774145 . A . PASS END=151774145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,618:0,49,255:20,0 chr1 151774146 . A . PASS END=151774146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 151774147 . G . PASS END=151774147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 151774148 . G . PASS END=151774228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,754:0,62,255:26,0 chr1 151774229 . G . PASS END=151774237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 151774238 . T . PASS END=151774278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,68,255:26,0 chr1 151774279 . C . PASS END=151774280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 151774281 . C . PASS END=151774285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 151774286 . G . PASS END=151774290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 151774291 . C . PASS END=151774297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 151774298 . T . PASS END=151774303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 151774304 . C . PASS END=151774325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 151774326 . C . PASS END=151774334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 151774335 . A . PASS END=151774337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 151774338 . C . PASS END=151774341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 151774342 . A . PASS END=151774343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151774344 . C . PASS END=151774366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 151774367 . G . PASS END=151774367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151774368 . T . PASS END=151774385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 151774386 . G . PASS END=151774396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 151774397 . A . PASS END=151774397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 151774398 . G . PASS END=151774403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 151774404 . G . PASS END=151774460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr1 151774461 . A . PASS END=151774462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151774463 . A . PASS END=151774469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151774470 . G . PASS END=151774470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151774471 . A . PASS END=151774471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 151774472 . G . PASS END=151774473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151774474 . T . PASS END=151774571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,623:0,40,255:19,0 chr1 151774572 . G . PASS END=151774580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 151774581 . A . PASS END=151774589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 151774590 . G . PASS END=151774591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 151774592 . C . PASS END=151774615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,50,255:19,0 chr1 151774616 . G . PASS END=151774638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:22,0 chr1 151774639 . T . PASS END=151774648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 151774649 . C . PASS END=151774664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 151774665 . A . PASS END=151774688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 151774689 . C . PASS END=151774697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 151774698 . C . PASS END=151774698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 151774699 . A . PASS END=151774704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 151774705 . T . PASS END=151774705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 151774706 . G . PASS END=151774708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:22,0 chr1 151774709 . G . PASS END=151774709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 151774710 . G . PASS END=151774739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 151774740 . G . PASS END=151774744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 151774745 . G . PASS END=151774780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr1 151774781 . G . PASS END=151774787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 151774788 . G . PASS END=151774789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 151774790 . G . PASS END=151774818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 151774819 . C . PASS END=151774823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 151774824 . C . PASS END=151774824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 151774825 . C . PASS END=151774848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:25,0 chr1 151774849 . A . PASS END=151774878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 151774879 . G . PASS END=151774885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 151774886 . G . PASS END=151774886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 151774887 . G . PASS END=151774890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151774891 . G . PASS END=151774891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:19,0 chr1 151774892 . A . PASS END=151774892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151774893 . G . PASS END=151774899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 151774900 . T . PASS END=151774905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151774906 . C . PASS END=151774917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 151774918 . T . PASS END=151774918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151774919 . C . PASS END=151774922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 151774923 . G . PASS END=151774923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151774924 . A . PASS END=151774927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151774928 . G . PASS END=151774928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 151774929 . G . PASS END=151774949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,765:0,50,255:19,0 chr1 151774950 . C . PASS END=151775005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,762:0,60,255:22,0 chr1 151775006 . G . PASS END=151775047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 151775048 . G . PASS END=151775049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 151775050 . A . PASS END=151775077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 151775078 . A . PASS END=151775080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 151775081 . C . PASS END=151775092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 151775093 . T . PASS END=151775105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 151775106 . T . PASS END=151775106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 151775107 . C . PASS END=151775113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 151775114 . G . PASS END=151775127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:16,0 chr1 151775128 . A . PASS END=151775128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:15,0 chr1 151775129 . G . PASS END=151775132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr1 151775133 . C . PASS END=151775164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 151775165 . C . PASS END=151775180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 151779948 . T . PASS END=151779948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:28,0 chr1 151779949 . C . PASS END=151779951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr1 151779952 . T . PASS END=151779952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:33,0 chr1 151779953 . T . PASS END=151780109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:34:0,93,1243:0,93,255:40,0 chr1 151783801 . C . PASS END=151783836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1106:0,88,255:38,0 chr1 151783837 . A . PASS END=151783837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:48:38:0,48,1152:0,48,255:33,0 chr1 151783838 . T . PASS END=151783880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:32:0,83,1170:0,83,255:40,0 chr1 151783881 . C . PASS END=151783881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:29,0 chr1 151783882 . T . PASS END=151783885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1163:0,80,255:32,0 chr1 151783886 . C . PASS END=151783886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,947:0,46,255:28,0 chr1 151783887 . T . PASS END=151783889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 151783890 . T . PASS END=151783890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:26,0 chr1 151783891 . C . PASS END=151783891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:27,0 chr1 151783892 . T . PASS END=151783896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,95,255:28,0 chr1 151783897 . G . PASS END=151783907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,63,255:24,0 chr1 151783908 . G . PASS END=151783908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 151783909 . A . PASS END=151783909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 151783910 . T . PASS END=151783910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:19,0 chr1 151785423 . G . PASS END=151785438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1167:0,89,255:38,0 chr1 151785439 . A . PASS END=151785439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1441:0,79,255:35,0 chr1 151785440 . A . PASS END=151785533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,99,1485:0,114,255:40,0 chr1 151785715 . C . PASS END=151785822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,135,255:40,0 chr1 151785964 . C . PASS END=151786137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1044:0,84,255:40,0 chr1 151786138 . G . PASS END=151786138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 151786139 . C . PASS END=151786146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 151786147 . T . PASS END=151786178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 151787050 . C . PASS END=151787055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,939:0,69,255:25,0 chr1 151787056 . C . PASS END=151787057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 151787058 . G . PASS END=151787058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 151787059 . G . PASS END=151787091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:29,0 chr1 151787092 . G . PASS END=151787096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 151787097 . G . PASS END=151787108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 151787109 . G . PASS END=151787109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 151787110 . G . PASS END=151787112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 151787113 . C . PASS END=151787113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 151787114 . T . PASS END=151787129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 151787130 . A . PASS END=151787137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,986:0,67,255:26,0 chr1 151787138 . C . PASS END=151787141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 151787142 . A . PASS END=151787142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 151787143 . G . PASS END=151787145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 151787146 . C . PASS END=151787146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:28,0 chr1 151787147 . T . PASS END=151787149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1092:0,87,255:29,0 chr1 151787150 . C . PASS END=151787150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 151787151 . A . PASS END=151787151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151787152 . G . PASS END=151787164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:23,0 chr1 151787165 . A . PASS END=151787171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 151787389 . C . PASS END=151787392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151787393 . C . PASS END=151787418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,613:0,40,255:19,0 chr1 151787419 . C . PASS END=151787419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 151787420 . C . PASS END=151787420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 151787421 . G . PASS END=151787435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,815:0,61,255:26,0 chr1 151787436 . C . PASS END=151787447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:30,0 chr1 151787448 . T . PASS END=151787448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 151787449 . A . PASS END=151787462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1139:0,90,255:34,0 chr1 151787463 . T . PASS END=151787463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,947:0,35,255:30,0 chr1 151787464 . G . PASS END=151787490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1207:0,102,255:35,0 chr1 151787491 . T . PASS END=151787491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:31,0 chr1 151787492 . G . PASS END=151787534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 151787535 . C . PASS END=151787535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 151787536 . T . PASS END=151787576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1211:0,86,255:33,0 chr1 151787577 . C . PASS END=151787577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:27,0 chr1 151787578 . G . PASS END=151787580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 151787581 . C . PASS END=151787605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,71,255:25,0 chr1 151787606 . G . PASS END=151787609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 151787610 . C . PASS END=151787623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 151787624 . C . PASS END=151787624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 151787625 . T . PASS END=151787631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:23,0 chr1 151787632 . A . PASS END=151787632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 151787633 . G . PASS END=151787649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,892:0,66,255:23,0 chr1 151787650 . G . PASS END=151787650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 151787651 . C . PASS END=151787655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151787656 . A . PASS END=151787656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 151787657 . G . PASS END=151787711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,839:0,62,255:25,0 chr1 151787712 . G . PASS END=151787712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 151787713 . A . PASS END=151787719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151787720 . C . PASS END=151787720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 151787721 . A . PASS END=151787741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 151787742 . A . PASS END=151787743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151787744 . C . PASS END=151787747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151787748 . A . PASS END=151787750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr1 151787751 . G . PASS END=151787751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 151787752 . T . PASS END=151787752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 151787753 . G . PASS END=151787783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 151787784 . G . PASS END=151787790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151787791 . G . PASS END=151787792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 151787793 . G . PASS END=151787802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1063:0,84,255:28,0 chr1 151787803 . C . PASS END=151787803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 151787804 . T . PASS END=151787853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:28:0,83,1055:0,83,255:34,0 chr1 151787854 . C . PASS END=151787854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1122:0,30,255:30,0 chr1 151787855 . A . PASS END=151787865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1249:0,99,255:33,0 chr1 151787866 . C . PASS END=151787866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:29,0 chr1 151787867 . C . PASS END=151787887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1055:0,84,255:30,0 chr1 151787888 . G . PASS END=151787901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr1 151789140 . C . PASS END=151789140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151789141 . A . PASS END=151789170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:26,0 chr1 151789171 . C . PASS END=151789173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 151789174 . C . PASS END=151789174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 151789175 . A . PASS END=151789179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:30,0 chr1 151789180 . G . PASS END=151789180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 151789181 . C . PASS END=151789208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1103:0,90,255:33,0 chr1 151789209 . G . PASS END=151789209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 151789210 . G . PASS END=151789247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1195:0,96,255:33,0 chr1 151789248 . C . PASS END=151789276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:23,0 chr1 151789277 . A . PASS END=151789278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 151789279 . G . PASS END=151789280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 151789281 . C . PASS END=151789281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 151789671 . C . PASS END=151789684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:95:42:0,95,1446:0,95,255:40,0 chr1 151789685 . A . PASS END=151789756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:43:0,98,1598:0,98,255:40,0 chr1 151798406 . T . PASS END=151798406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 151798407 . T . PASS END=151798407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr1 151798408 . C . PASS END=151798412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr1 151801905 . A . PASS END=151801913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1208:0,83,255:33,0 chr1 151801914 . T . PASS END=151801914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:32,0 chr1 151801915 . C . PASS END=151801915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 151801916 . T . PASS END=151801916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr1 151801917 . T . PASS END=151801920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:34,0 chr1 151801921 . T . PASS END=151801921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:30,0 chr1 151801922 . G . PASS END=151801934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:31,0 chr1 151803404 . C . PASS END=151803404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 151803405 . C . PASS END=151803406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 151803407 . G . PASS END=151803411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151803412 . C . PASS END=151803414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 151803415 . G . PASS END=151803442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:26,0 chr1 151803443 . C . PASS END=151803448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 151803449 . G T, 48.75 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=1.462;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:10,7,0:6,5,0:47:84,0,50,429,564,993:255,0,255:16,0:4.8753e+01,7.9730e-05,5.3000e+01,4.2890e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,6,6:8,8,9,3 chr1 151803450 . G . PASS END=151803463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,964:0,84,255:28,0 chr1 151803464 . A . PASS END=151803464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:26,0 chr1 151803465 . C . PASS END=151803468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 151803469 . C . PASS END=151803471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151803472 . C . PASS END=151803480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 151803481 . T . PASS END=151803481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr1 151803482 . C . PASS END=151803486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 151803487 . C . PASS END=151803487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 151803488 . T . PASS END=151803488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 151803489 . G . PASS END=151803499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr1 151803500 . T . PASS END=151803500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr1 151803501 . G . PASS END=151803512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:30,0 chr1 151803513 . C . PASS END=151803514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151803515 . G . PASS END=151803519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 151803520 . G . PASS END=151803523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 151803524 . G . PASS END=151803542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 151803543 . T . PASS END=151803579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 151803580 . C . PASS END=151803583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151803584 . C . PASS END=151803584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151803585 . T . PASS END=151803601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 151803602 . A . PASS END=151803608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 151804200 . C . PASS END=151804200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 151804201 . C . PASS END=151804201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 151804202 . C . PASS END=151804204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 151804205 . T . PASS END=151804205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:19,0 chr1 151804206 . G . PASS END=151804206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 151804207 . A . PASS END=151804207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 151804208 . G . PASS END=151804216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 151804217 . C . PASS END=151804217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 151804218 . T . PASS END=151804270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 151804271 . C . PASS END=151804271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 151804272 . C . PASS END=151804290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 151804291 . A . PASS END=151804291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 151804292 . G . PASS END=151804292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 151804293 . G . PASS END=151804317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:22,0 chr1 151804318 . G . PASS END=151804319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:53:23:0,53,836:0,53,255:23,0 chr1 151804320 . G . PASS END=151804345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 151804346 . G . PASS END=151804346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 151804347 . G . PASS END=151804359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 151804360 . C . PASS END=151804360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 151804361 . A . PASS END=151804364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 151804365 . A . PASS END=151804365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 151804366 . A . PASS END=151804402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr1 151804403 . G . PASS END=151804433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 151804434 . T . PASS END=151804434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 151810404 . C . PASS END=151810448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:18,0 chr1 151810449 . T . PASS END=151810449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 151810450 . C . PASS END=151810454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 151810455 . A . PASS END=151810470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 151810471 . A . PASS END=151810471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 151810472 . G . PASS END=151810481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr1 151810482 . G . PASS END=151810485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:19,0 chr1 151810486 . G . PASS END=151810492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 151810493 . A . PASS END=151810493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 151810494 . C . PASS END=151810494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 151810495 . T . PASS END=151810524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr1 151810525 . G . PASS END=151810525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 151810526 . C . PASS END=151810529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 151810530 . C . PASS END=151810532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:12,0 chr1 151810533 . G . PASS END=151810542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,53,255:18,0 chr1 151810543 . T . PASS END=151810543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,523:0,15,255:16,0 chr1 151810544 . T . PASS END=151810547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 151810548 . T . PASS END=151810548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,580:0,37,255:16,0 chr1 151810549 . C . PASS END=151810551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 151810552 . A . PASS END=151810552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,498:0,21,255:15,0 chr1 151810553 . G . PASS END=151810553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 151810554 . G . PASS END=151810554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 151810555 . C . PASS END=151810555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 151810556 . T . PASS END=151810556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:16,0 chr1 151810557 . G . PASS END=151810557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 151810558 . C . PASS END=151810558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,541:0,7,255:16,0 chr1 151810559 . G . PASS END=151810566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 151810567 . A . PASS END=151810567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:17,0 chr1 151810568 . G . PASS END=151810571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 151810572 . C . PASS END=151810572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:18,0 chr1 151810573 . G . PASS END=151810577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 151810578 . G . PASS END=151810578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:17,0 chr1 151810579 . C . PASS END=151810588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,592:0,40,255:18,0 chr1 151810589 . C . PASS END=151810590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr1 151810591 . A . PASS END=151810603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 151810604 . C . PASS END=151810604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:16,0 chr1 151810605 . G . PASS END=151810611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,622:0,40,255:19,0 chr1 151810612 . A . PASS END=151810612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:17,0 chr1 151810613 . T . PASS END=151810622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,630:0,40,255:18,0 chr1 151810623 . G . PASS END=151810634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:16:0,39,585:0,40,255:13,0 chr1 151810635 . C . PASS END=151810635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 151810636 . A . PASS END=151810640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 151810641 . G . PASS END=151810641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 151810642 . C . PASS END=151810642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:13,0 chr1 151810643 . T . PASS END=151810643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 151810644 . C . PASS END=151810644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr1 151810645 . T . PASS END=151810647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,448:0,45,255:15,0 chr1 151810648 . T . PASS END=151810648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 151810649 . G . PASS END=151810650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151810651 . T . PASS END=151810651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,385:0,28,255:13,0 chr1 151810652 . C . PASS END=151810652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151810653 . C . PASS END=151810654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151810655 . G . PASS END=151810655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 151810656 . C . PASS END=151810659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151810660 . C . PASS END=151810660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,369:0,28,255:13,0 chr1 151810661 . G . PASS END=151810661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 151810662 . G . PASS END=151810662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151810663 . A . PASS END=151810663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,377:0,28,255:13,0 chr1 151810664 . C . PASS END=151810665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 151810666 . C . PASS END=151810666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 151810667 . G . PASS END=151810667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 151810668 . G . PASS END=151810676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 151810677 . C . PASS END=151810678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 151810679 . T . PASS END=151810724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 151810725 . C . PASS END=151810741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:5:0,15,194:0,15,194:5,0 chr1 151810742 . C . LowDepth END=151810829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:3,0 chr1 151810830 . C . PASS END=151810865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr1 151810866 . C . LowGQ END=151810867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:0,0,137:4,0 chr1 151810868 . G . PASS END=151810875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr1 151810876 . A . PASS END=151810884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 151810885 . A . LowGQ END=151810885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:7,0,217:7,0 chr1 151810886 . G . PASS END=151810891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 151810892 . G . PASS END=151810892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 151810893 . C . PASS END=151810908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 151810909 . C . LowGQ END=151810909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr1 151810910 . G . PASS END=151810911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 151810912 . C . PASS END=151810912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 151810913 . G . PASS END=151810919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 151810920 . G . PASS END=151810921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 151810922 . G . PASS END=151810923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 151810924 . G . PASS END=151810924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 151810925 . G . PASS END=151810926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 151810927 . C . PASS END=151810927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 151810928 . T . PASS END=151810931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 151810932 . A . PASS END=151810932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 151810933 . T . PASS END=151810947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 151810948 . T . PASS END=151810948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 151810949 . T . PASS END=151810949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr1 151810950 . T . PASS END=151810950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 151810951 . T . PASS END=151810952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 151810953 . T . LowGQ END=151810953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,200:9,0,209:5,0 chr1 151810954 . G . PASS END=151810960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 151810961 . G . PASS END=151810965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,242:6,0 chr1 151810966 . T . LowGQ END=151810966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:7,0,239:5,0 chr1 151810967 . G . PASS END=151810973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,225:5,0 chr1 151810974 . G . PASS END=151810974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr1 151810975 . G . PASS END=151810999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,164:0,15,164:6,0 chr1 151811000 . G . PASS END=151811003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,239:0,21,239:7,0 chr1 151811004 . C . PASS END=151811004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 151811005 . G . PASS END=151811027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 151811028 . C . PASS END=151811028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 151811029 . G . PASS END=151811042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 151811043 . G . PASS END=151811043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 151811044 . T . PASS END=151811060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,250:0,24,250:8,0 chr1 151811061 . G . PASS END=151811061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 151811062 . C . PASS END=151811071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 151811072 . G . PASS END=151811075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 151811076 . C . PASS END=151811079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 151811080 . G . PASS END=151811093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 151811094 . C . PASS END=151811096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151811097 . G . PASS END=151811099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 151811100 . C . PASS END=151811113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 151811114 . G . PASS END=151811114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 151811115 . T . PASS END=151811115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151811116 . C . PASS END=151811139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 151811140 . C . PASS END=151811144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 151811145 . G . PASS END=151811170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 151811171 . G . PASS END=151811175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 151811176 . C . PASS END=151811176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 151811177 . T . PASS END=151811177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 151811178 . C . PASS END=151811178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 151811179 . T . PASS END=151811185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 151811186 . G . PASS END=151811188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 151811189 . A . PASS END=151811207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 151811208 . C . PASS END=151811213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 151811214 . G . PASS END=151811216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 151811217 . A . PASS END=151811222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr1 151811223 . C . PASS END=151811223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 151811224 . G . PASS END=151811225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 151811226 . G A, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,8,0:0,4,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1193e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,5:0,0,5,7 chr1 151811227 . C . PASS END=151811229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 151811230 . G . PASS END=151811263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 151811264 . G . PASS END=151811267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 151811268 . C . PASS END=151811287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:18,0 chr1 151811288 . G . PASS END=151811328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:23,0 chr1 151811329 . T . PASS END=151811329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 151811330 . C . PASS END=151811344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 151811345 . T . PASS END=151811346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151811347 . G . PASS END=151811350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 151811351 . A . PASS END=151811373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,621:0,51,255:17,0 chr1 151811374 . G . PASS END=151811374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 151811375 . C . PASS END=151811399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 151811400 . A . PASS END=151811422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 151811423 . C . LowGQ END=151811423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 151811424 . C . PASS END=151811424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 151811425 . G . PASS END=151811433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 151811434 . A . PASS END=151811434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 151811435 . C . PASS END=151811455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 151811456 . A . PASS END=151811465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:6,0 chr1 151819596 . T . PASS END=151819602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 151819603 . G . PASS END=151819612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 151819613 . T . PASS END=151819613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 151819614 . C . PASS END=151819617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 151819618 . T . PASS END=151819675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,475:0,42,255:16,0 chr1 151819676 . G . PASS END=151819676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 151819677 . C . PASS END=151819688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 151819689 . G . PASS END=151819690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151819691 . AGGAGGCAGGAGGCAGGCAGGGGAGGCAGGAGGCAGGAGGCAGGCAGG A, 112.83 PASS DP=29;MQ=166.39;FractionInformativeReads=0.724 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,10,0:0,11,0:63:145,66,0,803,66,803:0,48,255:15,0:1.1283e+02,6.2826e+01,2.3297e-06,4.5000e+02,9.7596e+01,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,15,6:0,0,14,7 chr1 151819692 . G . PASS END=151819694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 151819695 . G . PASS END=151819696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 151819697 . C . PASS END=151819697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 151819698 . A . PASS END=151819700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,515:0,12,255:15,0 chr1 151819701 . A . LowGQ END=151819701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,488:4,0,255:15,0 chr1 151819702 . G . PASS END=151819702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr1 151819703 . G . LowGQ END=151819710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:16:0,0,379:0,0,255:15,0 chr1 151819711 . G . PASS END=151819711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 151819712 . G . LowGQ END=151819714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,418:90,0,255:10,0 chr1 151819715 . G . PASS END=151819716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:18,0 chr1 151819717 . C . LowGQ END=151819720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,8:23:0:23:0,0,105:225,0,255:10,0 chr1 151819721 . A . PASS END=151819727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 151819728 . A . LowGQ END=151819729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,10:22:0:22:0,0,86:222,0,255:9,0 chr1 151819730 . G . PASS END=151819730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 151819731 . C . LowGQ END=151819732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,12:26:0:26:0,0,62:255,0,255:6,0 chr1 151819733 . G . PASS END=151819733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:17,0 chr1 151819734 . G . LowGQ END=151819739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:14,12:26:0:26:0,0,0:0,0,255:14,1 chr1 151819740 . G . PASS END=151819753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,78,255:17,0 chr1 151819754 . G . PASS END=151819754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:17,1 chr1 151819755 . C . LowGQ END=151819756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,8:26:0:26:0,0,300:210,0,255:18,1 chr1 151819757 . G . PASS END=151819757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 151819758 . G . LowGQ END=151819759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,7:26:0:25:0,0,434:188,0,255:18,0 chr1 151819760 . G . PASS END=151819760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 151819761 . A . LowGQ END=151819765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,5:24:0:23:0,0,418:86,0,255:19,0 chr1 151819766 . G . PASS END=151819768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 151819769 . G . PASS END=151819773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 151819774 . G . LowGQ END=151819775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,784:2,0,255:23,0 chr1 151819776 . G . PASS END=151819776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 151819777 . G . PASS END=151819777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,800:0,6,255:23,0 chr1 151819778 . C . PASS END=151819781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,831:0,33,255:24,0 chr1 151819782 . C . PASS END=151819782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 151819783 . A . PASS END=151819783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:24,0 chr1 151819784 . G . PASS END=151819784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 151819785 . G . PASS END=151819786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr1 151819787 . G . PASS END=151819787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 151819788 . A . PASS END=151819789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 151819790 . G . PASS END=151819790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 151819791 . C . PASS END=151819793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 151819794 . G . PASS END=151819797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,953:0,42,255:28,0 chr1 151819798 . C . PASS END=151819798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 151819799 . A . PASS END=151819799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr1 151819800 . G . PASS END=151819804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:30,0 chr1 151819805 . C . PASS END=151819890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:30:0,90,1125:0,90,255:40,0 chr1 151820214 . C . PASS END=151820260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:38:0,84,1347:0,84,255:40,0 chr1 151820261 . C . PASS END=151820297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,134,255:40,0 chr1 151820298 . G C, 188.45 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,26,0:0,21,0:138:226,141,0,1807,141,1814:255,125,0:1,0:1.8845e+02,1.3845e+02,0.0000e+00,4.5000e+02,1.7322e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,25:0,0,23,24 chr1 151820299 . T . PASS END=151820323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,111,1665:0,120,255:40,0 chr1 151820324 . T C, 49.14 PASS DP=40;MQ=250.00;MQRankSum=5.369;ReadPosRankSum=2.732;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,18,0:0.450,0.000:40:11,10,0:11,8,0:48:84,0,50,644,779,1423:255,0,255:21,0:4.9135e+01,7.4811e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,8,10:13,9,8,10 chr1 151820325 . C . PASS END=151820338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1305:0,101,255:37,0 chr1 151820658 . T . PASS END=151820658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 151820659 . T . PASS END=151820659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 151820660 . T . PASS END=151820694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,950:0,81,255:30,0 chr1 151820695 . C . PASS END=151820695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr1 151820696 . C . PASS END=151820711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 151820712 . G . PASS END=151820712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 151820713 . C . PASS END=151820713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 151820714 . A . PASS END=151820714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 151820715 . G . PASS END=151820718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 151820719 . T . PASS END=151820741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:26,0 chr1 151820742 . G . PASS END=151820745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 151820746 . C . PASS END=151820749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 151820750 . G . PASS END=151820768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,619:0,40,255:19,0 chr1 151823529 . C . PASS END=151823667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:38:0,96,1382:0,96,255:40,0 chr1 151824734 . C . PASS END=151824734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 151824735 . T . PASS END=151824737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 151824738 . G . PASS END=151824738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 151824739 . G . PASS END=151824813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1078:0,83,255:35,0 chr1 151824814 . C . PASS END=151824814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 151824815 . A . PASS END=151824820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 151824821 . T . PASS END=151824821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 151824822 . A . PASS END=151824862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1106:0,85,255:34,0 chr1 151824863 . T . PASS END=151824880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:27:0,69,1003:0,73,255:26,0 chr1 151824881 . C . PASS END=151824881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:22,0 chr1 151824882 . A . PASS END=151824895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,878:0,61,255:24,0 chr1 151824896 . A . PASS END=151824901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:21:0,57,855:0,63,255:19,0 chr1 151824902 . T . PASS END=151824902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 151824903 . C . PASS END=151824925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,629:0,40,255:19,0 chr1 151824926 . A . PASS END=151824935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:16:0,35,540:0,35,255:13,0 chr1 151825919 . C . PASS END=151825953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1133:0,88,255:37,0 chr1 151825954 . G . PASS END=151825990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,108,1620:0,117,255:40,0 chr1 151825991 . G T, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=4.276;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,23,0:0.523,0.000:44:9,9,0:12,14,0:48:85,0,50,823,716,1539:255,0,255:17,0:5.0000e+01,6.6269e-05,5.2782e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,10,13:13,8,12,11 chr1 151825992 . C . PASS END=151826028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:34:0,89,1208:0,89,255:38,0 chr1 151826029 . A . PASS END=151826041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:32,0 chr1 151847364 . T . PASS END=151847404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:65:0,120,1800:0,186,255:40,0 chr1 151849477 . T . PASS END=151849601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:36:0,84,1221:0,84,255:40,0 chr1 151860749 . C . PASS END=151860859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:32:0,82,1119:0,82,255:40,0 chr1 151861690 . C . PASS END=151861849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,107,1800:0,107,255:40,0 chr1 151867437 . T . PASS END=151867522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:65:0,120,1800:0,181,255:40,0 chr1 151867523 . G . PASS END=151867559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,159,255:40,0 chr1 151867560 . G A, 256.30 PASS DP=70;MQ=168.33;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,37,0:0,33,0:206:294,209,0,2617,209,2617:255,213,0:0,0:2.5630e+02,2.0630e+02,0.0000e+00,4.5000e+02,2.4107e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,45:0,0,30,40 chr1 151867561 . T . PASS END=151867597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,155,255:40,0 chr1 151867598 . T . PASS END=151867652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:31:0,82,1149:0,82,255:40,0 chr1 151867653 . C . PASS END=151867653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 151867654 . T . PASS END=151867656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 151867657 . G . PASS END=151867658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 151867659 . A . PASS END=151867662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1036:0,90,255:30,0 chr1 151867663 . A . PASS END=151867664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 151867665 . T . PASS END=151867667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 151867668 . C . PASS END=151867668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 151867669 . C . PASS END=151867669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:25,0 chr1 151867670 . T . PASS END=151867670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 151881836 . C . PASS END=151881841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 151881842 . G . PASS END=151881842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 151881843 . G . PASS END=151881847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 151881848 . C . PASS END=151881878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:23,0 chr1 151881879 . G . PASS END=151881884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 151881885 . A C, 112.75 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,11,0:0,11,0:63:151,66,0,824,66,824:255,66,0:0,0:1.1275e+02,6.2754e+01,2.3297e-06,4.5000e+02,9.7524e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,16:0,0,11,11 chr1 151881886 . G . PASS END=151881896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 151881897 . C . PASS END=151881897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 151881898 . C . PASS END=151881915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,607:0,51,255:19,0 chr1 151881916 . C . PASS END=151881916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 151881917 . G . PASS END=151881922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,627:0,51,255:17,0 chr1 151881923 . G . PASS END=151881933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 151881934 . T . PASS END=151881934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 151955639 . C . PASS END=151955642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:35,0 chr1 151955643 . T . PASS END=151955643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1232:0,58,255:33,0 chr1 151955644 . T . PASS END=151955743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1213:0,91,255:40,0 chr1 151955744 . T . PASS END=151955744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1391:0,74,255:26,0 chr1 151955745 . C . PASS END=151955745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:43:0,81,1215:0,91,255:27,0 chr1 151955746 . T . PASS END=151955750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:75:43:0,75,1125:0,91,255:26,0 chr1 151955751 . T . PASS END=151955751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1078:0,57,255:24,0 chr1 151955752 . G . PASS END=151955752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:23,0 chr1 151955753 . G . PASS END=151955753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:24,0 chr1 151955754 . T . PASS END=151955768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 151955769 . A . PASS END=151955769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr1 151955770 . T . PASS END=151955776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 151955777 . C . PASS END=151955778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 151955779 . C . PASS END=151955785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:21:0,33,495:0,47,255:13,0 chr1 151955786 . A . PASS END=151955800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,319:0,27,255:9,0 chr1 151958575 . T . PASS END=151958580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 151958581 . A . PASS END=151958581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 151958582 . A . PASS END=151958587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 151958588 . G . PASS END=151958593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:31,0 chr1 151958594 . T . PASS END=151958594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 151958595 . C . PASS END=151958602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 151958603 . A . PASS END=151958603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 151958604 . T . PASS END=151958706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:33:0,80,1224:0,80,255:40,0 chr1 152005138 . T . PASS END=152005149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,853:0,66,255:25,0 chr1 152005150 . C . PASS END=152005150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 152005151 . T . PASS END=152005151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:26,0 chr1 152005152 . G . PASS END=152005154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 152005155 . A . PASS END=152005155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 152005156 . A . PASS END=152005156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152005157 . G . PASS END=152005157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 152005158 . G . PASS END=152005158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152005159 . G . PASS END=152005160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 152005161 . C . PASS END=152005176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1316:0,92,255:37,0 chr1 152005177 . G . PASS END=152005177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:35,0 chr1 152005178 . T . PASS END=152005299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:33:0,83,1296:0,83,255:40,0 chr1 152006124 . C . PASS END=152006134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,773:0,72,255:24,0 chr1 152006135 . C . PASS END=152006135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 152006136 . A . PASS END=152006136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152006137 . G . PASS END=152006137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 152006138 . C . PASS END=152006140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 152006141 . G . PASS END=152006152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 152006153 . T . PASS END=152006156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 152006157 . G . PASS END=152006269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1180:0,87,255:40,0 chr1 152006270 . T . PASS END=152006270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 152006271 . T . PASS END=152006271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152006272 . T . PASS END=152006272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr1 152006273 . T . PASS END=152006276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 152009389 . C . PASS END=152009391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 152052033 . T . PASS END=152052041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:30,0 chr1 152052042 . T . PASS END=152052042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:23:30:0,23,792:0,23,255:26,0 chr1 152052043 . G . PASS END=152052052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1105:0,90,255:31,0 chr1 152052053 . A . PASS END=152052053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 152052054 . C . PASS END=152052092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1111:0,83,255:33,0 chr1 152052093 . T . PASS END=152052093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1119:0,71,255:31,0 chr1 152052094 . C . PASS END=152052100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:33,0 chr1 152052101 . T . PASS END=152052101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 152052102 . C . PASS END=152052168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:32:0,85,1075:0,85,255:39,0 chr1 152052169 . T . PASS END=152052178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,79,255:27,0 chr1 152052179 . A . PASS END=152052179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:20,0 chr1 152052180 . A . PASS END=152052201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,900:0,72,255:26,0 chr1 152052202 . T . PASS END=152052202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152052203 . C . PASS END=152052207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,970:0,67,255:26,0 chr1 152052208 . G . PASS END=152052211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152052212 . G . PASS END=152052247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,840:0,61,255:26,0 chr1 152052248 . T . PASS END=152052248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,848:0,47,255:22,0 chr1 152052249 . A . PASS END=152052263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 152052264 . C . PASS END=152052270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,806:0,53,255:19,0 chr1 152052271 . G . PASS END=152052271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 152052272 . G . PASS END=152052273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 152052274 . G . PASS END=152052275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 152052276 . C . PASS END=152052281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152052282 . C . PASS END=152052282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 152052283 . A . PASS END=152052306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,623:0,41,255:19,0 chr1 152052307 . T . PASS END=152052308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 152052309 . T . PASS END=152052337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,560:0,48,255:17,0 chr1 152052338 . T . PASS END=152052349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 152052350 . A . PASS END=152052350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 152052351 . C . PASS END=152052382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 152052383 . G . PASS END=152052403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 152052404 . T . PASS END=152052404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 152052405 . C . PASS END=152052407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 152052408 . C . PASS END=152052472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,156:0,15,156:6,0 chr1 152052473 . G . PASS END=152052474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 152052475 . G . PASS END=152052476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 152052477 . G . PASS END=152052477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 152052478 . C . PASS END=152052482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr1 152052483 . C . LowGQ END=152052512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,59:0,0,82:4,1 chr1 152052513 . T . PASS END=152052514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 152052515 . G . LowGQ END=152052516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:5,0,82:3,0 chr1 152052517 . T . PASS END=152052530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 152052531 . A . LowGQ END=152052533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:5,0,82:3,0 chr1 152052534 . A . PASS END=152052538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 152052539 . T . LowGQ END=152052539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,70:27,0,96:3,0 chr1 152052540 . G . PASS END=152052541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 152052542 . C . LowDepth;LowGQ END=152052715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 152052716 . G . PASS END=152052756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 152052757 . C . PASS END=152052758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 152052759 . T . PASS END=152052759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 152052760 . T . PASS END=152052820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,205:0,21,205:9,0 chr1 152052821 . C . PASS END=152052848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr1 152052849 . C . PASS END=152052849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 152052850 . C . PASS END=152052859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 152052860 . T . PASS END=152052860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:14,0 chr1 152052861 . C . PASS END=152052872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 152052873 . T . PASS END=152052873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 152052874 . A . PASS END=152052877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 152052878 . A . PASS END=152052878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 152052879 . A . PASS END=152052884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 152052885 . T . PASS END=152052885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 152052886 . T . PASS END=152052886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 152052887 . G . PASS END=152052887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 152052888 . A . PASS END=152052889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 152052890 . G . PASS END=152052890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 152052891 . G . PASS END=152052899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 152052900 . G . PASS END=152052900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 152052901 . C . PASS END=152052911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 152052912 . A . PASS END=152052912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 152052913 . G . PASS END=152052920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr1 152052921 . C . PASS END=152052924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 152052925 . G . PASS END=152052959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 152052960 . A . PASS END=152052993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr1 152052994 . C . PASS END=152053015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 152053016 . T . PASS END=152053020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 152053021 . G . PASS END=152053054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 152053055 . T . PASS END=152053055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 152053056 . C . PASS END=152053062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr1 152053063 . G . PASS END=152053074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 152053075 . C . PASS END=152053103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 152053104 . C . PASS END=152053104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:7,0 chr1 152053105 . T . PASS END=152053106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 152053107 . A . PASS END=152053107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 152053108 . C . PASS END=152053114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,256:0,24,255:8,0 chr1 152053115 . A . PASS END=152053115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 152053116 . G . PASS END=152053121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152053122 . T . PASS END=152053126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 152053127 . A . PASS END=152053127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 152053128 . A . PASS END=152053173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 152053174 . T . PASS END=152053175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 152053176 . A . PASS END=152053176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 152053177 . G . PASS END=152053183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 152053184 . C . PASS END=152053185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 152053186 . G . PASS END=152053193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152053194 . G . PASS END=152053205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,227:6,0 chr1 152053206 . A . PASS END=152053283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr1 152057443 . T . PASS END=152057447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:22,0 chr1 152057448 . G . PASS END=152057559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,906:0,81,255:40,0 chr1 152057560 . A . PASS END=152057560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1480:0,74,255:37,0 chr1 152057561 . T . PASS END=152057813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:36:0,88,1296:0,88,255:40,0 chr1 152057814 . T . PASS END=152057814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:31,0 chr1 152057815 . C . PASS END=152058061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1069:0,83,255:40,0 chr1 152058062 . A . PASS END=152058062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1139:0,44,255:28,0 chr1 152058063 . A . PASS END=152058064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 152058065 . T . PASS END=152058065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:29,0 chr1 152058066 . C . PASS END=152058212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1189:0,86,255:37,0 chr1 152058213 . G . PASS END=152058213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 152058214 . C . PASS END=152058273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1030:0,83,255:35,0 chr1 152058274 . A . PASS END=152058274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 152058275 . G . PASS END=152058277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152058278 . T . PASS END=152058278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:26,0 chr1 152058279 . G . PASS END=152058284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 152058285 . G . PASS END=152058285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 152058286 . G . PASS END=152058293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1117:0,90,255:32,0 chr1 152058294 . T . PASS END=152058294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:30,0 chr1 152058295 . G . PASS END=152058303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:36,0 chr1 152058304 . A . PASS END=152058304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:34,0 chr1 152058305 . T . PASS END=152058321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1288:0,81,255:37,0 chr1 152058322 . T . PASS END=152058322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1227:0,56,255:32,0 chr1 152058323 . G . PASS END=152058341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1310:0,92,255:34,0 chr1 152058342 . C . PASS END=152058345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1151:0,69,255:33,0 chr1 152058346 . G . PASS END=152058346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:34,0 chr1 152058347 . T . PASS END=152058347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:32,0 chr1 152058348 . T . PASS END=152058367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1053:0,85,255:36,0 chr1 152058368 . T . PASS END=152058368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:32,0 chr1 152058369 . G . PASS END=152058374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:34,0 chr1 152058375 . G . PASS END=152058375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:32,0 chr1 152058376 . G . PASS END=152058430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1158:0,85,255:36,0 chr1 152058431 . T . PASS END=152058431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:29,0 chr1 152058432 . G . PASS END=152058434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:30,0 chr1 152058435 . T . PASS END=152058435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:28,0 chr1 152058436 . C . PASS END=152058442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:30,0 chr1 152058443 . T . PASS END=152058444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 152058445 . C . PASS END=152058457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:29:0,82,1111:0,82,255:29,0 chr1 152058458 . A . PASS END=152058458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 152058459 . G . PASS END=152058459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 152058460 . T . PASS END=152058460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:27,0 chr1 152058461 . T . PASS END=152058465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 152058466 . T . PASS END=152058466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152058467 . G . PASS END=152058467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 152058468 . T . PASS END=152058468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr1 152058469 . C . PASS END=152058493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 152058494 . G . PASS END=152058494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 152058495 . A . PASS END=152058516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1133:0,80,255:31,0 chr1 152058517 . A . PASS END=152058517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 152058518 . G . PASS END=152058970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:88:32:0,88,1210:0,88,255:40,0 chr1 152058971 . C . PASS END=152058971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,6:48:44:48:0,44,1319:0,44,255:36,0 chr1 152058972 . C . PASS END=152059110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:30:0,87,1271:0,89,255:40,0 chr1 152059111 . A . PASS END=152059111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:29,0 chr1 152059112 . T . PASS END=152059191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1148:0,83,255:40,0 chr1 152059192 . A . PASS END=152059192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:30,0 chr1 152059193 . G . PASS END=152059361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:35:0,89,1263:0,89,255:40,0 chr1 152059362 . T . PASS END=152059362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:79:56:0,79,1689:0,79,255:40,0 chr1 152059363 . T . PASS END=152060009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1305:0,88,255:40,0 chr1 152060010 . G . PASS END=152060019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:30:0,72,1080:0,90,255:26,0 chr1 152060482 . C . PASS END=152060493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1238:0,105,255:35,0 chr1 152060494 . C . PASS END=152060494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 152060495 . C . PASS END=152060495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1388:0,108,255:36,0 chr1 152060496 . C . PASS END=152060497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1296:0,70,255:35,0 chr1 152060498 . A . PASS END=152060580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,94,255:40,0 chr1 152060581 . C . PASS END=152060581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 152060582 . T . PASS END=152060582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 152060583 . C . PASS END=152060619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 152079861 . T . PASS END=152079863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152079864 . A . PASS END=152079864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 152079865 . G . PASS END=152079869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,829:0,69,255:23,0 chr1 152079870 . G . PASS END=152079951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1028:0,80,255:40,0 chr1 152079952 . T . PASS END=152079988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1209:0,89,255:35,0 chr1 152079989 . T G, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=2.695;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,21,0:0.583,0.000:36:5,12,0:10,9,0:47:85,0,48,743,529,1272:255,0,255:14,0:5.0000e+01,7.9471e-05,5.0816e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,11,10:11,4,16,5 chr1 152079990 . T . PASS END=152080026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1219:0,88,255:35,0 chr1 152080027 . T . PASS END=152080034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 152080035 . G . PASS END=152080037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 152080038 . G . PASS END=152080044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 152080045 . T . PASS END=152080068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 152080069 . T . PASS END=152080070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 152080071 . C . PASS END=152080072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152080073 . G . PASS END=152080076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152080077 . A . PASS END=152080116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,987:0,73,255:26,0 chr1 152080117 . C . PASS END=152080120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 152080121 . G . PASS END=152080122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 152080123 . C . PASS END=152080145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152080146 . C . PASS END=152080146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 152080147 . T . PASS END=152080149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152080150 . T . PASS END=152080221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,947:0,62,255:26,0 chr1 152080222 . T . PASS END=152080222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,850:0,59,255:21,0 chr1 152080223 . C . PASS END=152080226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 152080227 . G . PASS END=152080241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr1 152080242 . A . PASS END=152080242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152080243 . C . PASS END=152080286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:17:0,41,651:0,41,255:19,0 chr1 152080287 . C . PASS END=152080291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152080292 . C . PASS END=152080300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152080301 . G . PASS END=152080301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 152080302 . G . PASS END=152080317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,649:0,41,255:19,0 chr1 152080318 . T . PASS END=152080318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:17,0 chr1 152080319 . C . PASS END=152080323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,646:0,57,255:19,0 chr1 152080324 . C . PASS END=152080326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 152080327 . C . PASS END=152080331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 152080332 . C . PASS END=152080332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152080333 . T . PASS END=152080340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,765:0,50,255:19,0 chr1 152080341 . C . PASS END=152080341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 152080342 . T . PASS END=152080349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,637:0,40,255:19,0 chr1 152080350 . C . PASS END=152080350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:17,0 chr1 152080351 . T . PASS END=152080352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152080353 . G . PASS END=152080355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 152080356 . G . PASS END=152080356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 152080357 . A . PASS END=152080360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr1 152080361 . G . PASS END=152080361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr1 152080362 . T . PASS END=152080362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 152080363 . T . PASS END=152080365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 152080366 . T . PASS END=152080366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 152080367 . C . PASS END=152080372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 152080373 . G . PASS END=152080373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 152080374 . G . PASS END=152080374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 152080375 . A . PASS END=152080375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 152080376 . A . PASS END=152080376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr1 152080377 . T . PASS END=152080377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 152080378 . T . PASS END=152080383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,833:0,72,255:24,0 chr1 152080384 . T . PASS END=152080384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:21,0 chr1 152080385 . C . PASS END=152080386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152080387 . C . PASS END=152080387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 152080388 . G . PASS END=152080393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 152080394 . G . PASS END=152080396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 152080397 . G . PASS END=152080410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,872:0,64,255:26,0 chr1 152080411 . T . PASS END=152080412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152080413 . T . PASS END=152080413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:25,0 chr1 152080414 . T . PASS END=152080414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152080415 . C . PASS END=152080418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 152080419 . T . PASS END=152080419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,903:0,45,255:26,0 chr1 152080420 . T . PASS END=152080421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 152080422 . C . PASS END=152080422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr1 152080423 . G . PASS END=152080424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152080425 . A . PASS END=152080439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,955:0,70,255:26,0 chr1 152080440 . C . PASS END=152080440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 152080441 . T . PASS END=152080443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 152080444 . A . PASS END=152080444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 152080445 . G . PASS END=152080447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 152080448 . T . PASS END=152080449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152080450 . T . PASS END=152080451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152080452 . T . PASS END=152080452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 152080453 . C . PASS END=152080453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152080454 . T . PASS END=152080454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 152080455 . G . PASS END=152080463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 152080464 . T . PASS END=152080464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 152080465 . T . PASS END=152080466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 152080467 . G . PASS END=152080467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 152080468 . C . PASS END=152080469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152080470 . G . PASS END=152080472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 152080473 . C . PASS END=152080475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 152080476 . C . PASS END=152080476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:25,0 chr1 152080477 . T . PASS END=152080480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:26,0 chr1 152080481 . C . PASS END=152080482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 152080483 . T . PASS END=152080496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:77:26:0,77,925:0,77,255:26,0 chr1 152080497 . G . PASS END=152080499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 152080500 . C . PASS END=152080515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,884:0,72,255:26,0 chr1 152080516 . C . PASS END=152080516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 152080517 . G . PASS END=152080526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 152080527 . C . PASS END=152080530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 152080531 . A . PASS END=152080531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 152080532 . G . PASS END=152080544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 152080545 . C . PASS END=152080545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 152080546 . A . PASS END=152080546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152080547 . G . PASS END=152080548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 152080549 . T . PASS END=152080549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:25,0 chr1 152080550 . G . PASS END=152080567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:24,0 chr1 152080568 . A . PASS END=152080568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 152080569 . T . PASS END=152080572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,809:0,61,255:23,0 chr1 152080573 . C . PASS END=152080573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr1 152080574 . T . PASS END=152080578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,856:0,61,255:25,0 chr1 152080579 . C . PASS END=152080579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:23,0 chr1 152080580 . G . PASS END=152080592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,842:0,64,255:26,0 chr1 152080593 . G . PASS END=152080595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152080596 . C . PASS END=152080596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 152080597 . T . PASS END=152080607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152080608 . T . PASS END=152080608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,834:0,53,255:26,0 chr1 152080609 . T . PASS END=152080610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152080611 . G . PASS END=152080611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 152080612 . C . PASS END=152080617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152080618 . T . PASS END=152080631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,978:0,70,255:26,0 chr1 152080632 . T . PASS END=152080632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 152080633 . T . PASS END=152080638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 152080639 . C . PASS END=152080639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 152080640 . G . PASS END=152080647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 152080648 . T . PASS END=152080658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:18,0 chr1 152080659 . T . PASS END=152080659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,584:0,26,255:17,0 chr1 152080660 . T . PASS END=152080662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 152080663 . T . PASS END=152080663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 152080664 . G . PASS END=152080667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 152080668 . C . PASS END=152080668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:12,0 chr1 152080669 . A . PASS END=152080669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:11,0 chr1 152080670 . G . PASS END=152080682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:14:0,33,495:0,37,255:13,0 chr1 152080683 . A . PASS END=152080684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:13,0 chr1 152080685 . G . PASS END=152080685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 152080686 . G . PASS END=152080686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 152080687 . A . PASS END=152080687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 152080688 . A . PASS END=152080688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 152080689 . T . PASS END=152080690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:15,0 chr1 152080691 . T . PASS END=152080691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr1 152080692 . T . PASS END=152080697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 152080698 . G . PASS END=152080698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 152080699 . C . PASS END=152080700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152080701 . G . PASS END=152080702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 152080703 . C . PASS END=152080703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:13,0 chr1 152080704 . G . PASS END=152080704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:14,0 chr1 152080705 . T . PASS END=152080707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 152080708 . C . PASS END=152080709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:14,0 chr1 152080710 . C . PASS END=152080710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:12,0 chr1 152080711 . A . PASS END=152080712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152080713 . C . PASS END=152080713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 152080714 . T . PASS END=152080714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152080715 . G . PASS END=152080717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:13,0 chr1 152080718 . G . PASS END=152080718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152080719 . T . PASS END=152080719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 152080720 . T . PASS END=152080724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 152080725 . C . PASS END=152080725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 152080726 . T . PASS END=152080726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152080727 . C . PASS END=152080728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,551:0,34,255:15,0 chr1 152080729 . T . PASS END=152080731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 152080732 . C . PASS END=152080732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 152080733 . G . PASS END=152080736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 152080737 . C . PASS END=152080738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,498:0,31,255:13,0 chr1 152080739 . G . PASS END=152080739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 152080740 . C . PASS END=152080743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 152080744 . G . PASS END=152080744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:14,0 chr1 152080745 . G . PASS END=152080750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:18,0 chr1 152080751 . C . PASS END=152080751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 152080752 . C . PASS END=152080752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 152080753 . T . PASS END=152080753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 152080754 . C . PASS END=152080761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,601:0,54,255:19,0 chr1 152080762 . T . PASS END=152080764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 152080765 . C . PASS END=152080766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 152080767 . G . PASS END=152080768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 152080769 . C . PASS END=152080774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 152080775 . C . PASS END=152080782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 152080783 . T . PASS END=152080783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 152080784 . G . PASS END=152080798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:24,0 chr1 152080799 . C . PASS END=152080801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 152080802 . T . PASS END=152080820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,820:0,61,255:25,0 chr1 152080821 . G . PASS END=152080822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,777:0,42,255:23,0 chr1 152080823 . C . PASS END=152080826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152080827 . G . PASS END=152080827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 152080828 . C . PASS END=152080829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152080830 . G . PASS END=152080830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 152080831 . A . PASS END=152080832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 152080833 . T . PASS END=152080833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 152080834 . T . PASS END=152080840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 152080841 . C . PASS END=152080887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr1 152080888 . T . PASS END=152080929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,398:0,36,255:12,0 chr1 152080930 . A . PASS END=152080932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 152080933 . T . PASS END=152080937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 152080938 . T . PASS END=152080994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:9,0 chr1 152080995 . C . PASS END=152081014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:13,0 chr1 152081015 . C . PASS END=152081015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 152081016 . C . PASS END=152081017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152081018 . C . PASS END=152081019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 152081020 . C . PASS END=152081020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152081021 . G . PASS END=152081021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 152081022 . G . PASS END=152081026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152081027 . T . PASS END=152081027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 152081028 . T . PASS END=152081028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152081029 . C . PASS END=152081032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 152081033 . C . PASS END=152081033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 152081034 . A . PASS END=152081049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 152081050 . T . PASS END=152081052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 152081053 . T . PASS END=152081059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152081060 . G . PASS END=152081060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 152081061 . C . PASS END=152081089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,590:0,40,255:19,0 chr1 152081090 . G . PASS END=152081090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 152081091 . G . PASS END=152081108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,607:0,51,255:18,0 chr1 152081109 . T . PASS END=152081109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 152081110 . T . PASS END=152081115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr1 152081116 . C . PASS END=152081126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr1 152081127 . C . PASS END=152081127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 152081128 . T . PASS END=152081141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr1 152081142 . G . PASS END=152081142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 152081143 . A . PASS END=152081164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,61,255:23,0 chr1 152081165 . T . PASS END=152081165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:21,0 chr1 152081166 . G . PASS END=152081170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 152081171 . G . PASS END=152081175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 152081176 . T . PASS END=152081177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 152081178 . T . PASS END=152081178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,962:0,48,255:25,0 chr1 152081179 . T . PASS END=152081182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152081183 . G . PASS END=152081183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,861:0,34,255:24,0 chr1 152081184 . G . PASS END=152081187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 152081188 . T . PASS END=152081199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,897:0,81,255:28,0 chr1 152081200 . T . PASS END=152081200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 152081201 . C . PASS END=152081204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152081205 . G . PASS END=152081205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 152081206 . C . PASS END=152081206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 152081207 . G . PASS END=152081211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152081212 . A . PASS END=152081215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1063:0,74,255:25,0 chr1 152081216 . G . PASS END=152081216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 152081217 . T . PASS END=152081217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1025:0,41,255:25,0 chr1 152081218 . T . PASS END=152081219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 152081220 . T . PASS END=152081220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 152081221 . T . PASS END=152081223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1070:0,87,255:29,0 chr1 152081224 . T . PASS END=152081224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 152081225 . C . PASS END=152081228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 152081229 . C . PASS END=152081229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 152081230 . A . PASS END=152081230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,909:0,32,255:26,0 chr1 152081231 . G . PASS END=152081231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 152081232 . G . PASS END=152081243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr1 152081244 . A . PASS END=152081244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 152081245 . C . PASS END=152081246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152081247 . C . PASS END=152081247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:30,0 chr1 152081248 . T . PASS END=152081249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152081250 . T . PASS END=152081250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,919:0,76,255:30,0 chr1 152081251 . T . PASS END=152081253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:29,0 chr1 152081254 . C . PASS END=152081258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 152081259 . C . PASS END=152081259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 152081260 . A . PASS END=152081260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1105:0,60,255:27,0 chr1 152081261 . G . PASS END=152081268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1141:0,82,255:29,0 chr1 152081269 . T . PASS END=152081271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152081272 . T . PASS END=152081274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 152081275 . C . PASS END=152081282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,962:0,67,255:26,0 chr1 152081283 . G . PASS END=152081283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152081284 . A . PASS END=152081285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 152081286 . C . PASS END=152081286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152081287 . A . PASS END=152081300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,931:0,65,255:26,0 chr1 152081301 . G . PASS END=152081301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 152081302 . C . PASS END=152081302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 152081303 . G . PASS END=152081304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 152081305 . A . PASS END=152081305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 152081306 . A . PASS END=152081307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 152081308 . T . PASS END=152081308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr1 152081309 . T . PASS END=152081313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr1 152081314 . T . PASS END=152081314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:22,0 chr1 152081315 . G . PASS END=152081320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1002:0,70,255:25,0 chr1 152081321 . C . PASS END=152081343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:28,0 chr1 152081344 . T . PASS END=152081344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 152081345 . C . PASS END=152081371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152081372 . G . PASS END=152081393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,939:0,75,255:25,0 chr1 152081394 . A . PASS END=152081394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 152081395 . C . PASS END=152081400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 152081401 . T . PASS END=152081401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 152081402 . T . PASS END=152081447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,844:0,61,255:25,0 chr1 152081448 . T . PASS END=152081448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:24,0 chr1 152081449 . T . PASS END=152081451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 152081452 . C . PASS END=152081452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:24,0 chr1 152081453 . T . PASS END=152081456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 152081457 . G . PASS END=152081457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,836:0,28,255:22,0 chr1 152081458 . C . PASS END=152081458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 152081459 . G . PASS END=152081459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152081460 . G . PASS END=152081460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:24,0 chr1 152081461 . T . PASS END=152081480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,939:0,64,255:25,0 chr1 152081481 . G . PASS END=152081482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 152081483 . G . PASS END=152081483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152081484 . C . PASS END=152081484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 152081485 . T . PASS END=152081485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152081486 . C . PASS END=152081486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:22,0 chr1 152081487 . C . PASS END=152081492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,817:0,61,255:23,0 chr1 152081493 . G . PASS END=152081493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 152081494 . C . PASS END=152081494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 152081495 . G . PASS END=152081495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 152081496 . C . PASS END=152081503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,953:0,65,255:26,0 chr1 152081504 . G . PASS END=152081504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152081505 . T . PASS END=152081505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:25,0 chr1 152081506 . T . PASS END=152081508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 152081509 . T . PASS END=152081512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152081513 . T . PASS END=152081513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:26,0 chr1 152081514 . A . PASS END=152081519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 152081520 . T . PASS END=152081520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 152081521 . T . PASS END=152081536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,895:0,67,255:26,0 chr1 152081537 . G . PASS END=152081537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,886:0,29,255:24,0 chr1 152081538 . G . PASS END=152081540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 152081541 . G . PASS END=152081541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152081542 . C . PASS END=152081542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 152081543 . G . PASS END=152081543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 152081544 . C . PASS END=152081544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152081545 . A . PASS END=152081551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1016:0,71,255:27,0 chr1 152081552 . G . PASS END=152081552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:27,0 chr1 152081553 . T . PASS END=152081555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 152081556 . C . PASS END=152081556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 152081557 . T . PASS END=152081568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 152081569 . T . PASS END=152081569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:26,0 chr1 152081570 . T . PASS END=152081575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 152081576 . C . PASS END=152081577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 152081578 . T . PASS END=152081703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:29:0,81,1215:0,87,255:40,0 chr1 152081704 . C . PASS END=152081704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:61:48:0,61,1352:0,61,255:40,0 chr1 152081705 . G . PASS END=152081883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1260:0,87,255:40,0 chr1 152081884 . A . PASS END=152081920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,110,1537:0,110,255:40,0 chr1 152081921 . G C, 49.09 PASS DP=47;MQ=248.73;MQRankSum=5.275;ReadPosRankSum=3.049;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,21,0:0.447,0.000:47:18,11,0:8,10,0:48:84,0,50,741,901,1642:255,0,255:24,0:4.9091e+01,7.5329e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,14,11,10:12,14,7,14 chr1 152081922 . C . PASS END=152081958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,102,1468:0,104,255:40,0 chr1 152081959 . C . PASS END=152082623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:34:0,81,1024:0,81,255:40,0 chr1 152082624 . T . PASS END=152082624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1596:0,72,255:40,0 chr1 152082625 . T . PASS END=152082651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:48:0,82,1236:0,82,255:40,0 chr1 152082652 . T . PASS END=152082652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:73:53:0,73,1760:0,73,255:40,0 chr1 152082653 . G . PASS END=152082656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:53:0,120,1800:0,124,255:40,0 chr1 152082657 . C . PASS END=152082657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:67:52:0,67,1496:0,67,255:40,0 chr1 152082658 . C . PASS END=152082694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:51:0,82,1695:0,82,255:40,0 chr1 152082695 . C . PASS END=152082695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:65:53:0,65,1820:0,65,255:40,0 chr1 152082696 . C . PASS END=152082706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:84:52:0,84,1685:0,84,255:40,0 chr1 152082707 . A . PASS END=152082707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:59:52:0,59,1499:0,59,255:40,0 chr1 152082708 . C . PASS END=152082870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:34:0,80,1160:0,80,255:40,0 chr1 152082871 . T . PASS END=152082871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1058:0,71,255:29,0 chr1 152082872 . C . PASS END=152082877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 152082878 . C . PASS END=152082878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 152082879 . C . PASS END=152082890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:34,0 chr1 152082891 . C . PASS END=152082891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 152082892 . T . PASS END=152082916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1197:0,88,255:34,0 chr1 152082917 . G . PASS END=152082917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 152082918 . T . PASS END=152082929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1174:0,93,255:32,0 chr1 152082930 . T . PASS END=152082930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,953:0,79,255:28,0 chr1 152082931 . C . PASS END=152082934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 152082935 . T . PASS END=152082935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,926:0,73,255:27,0 chr1 152082936 . C . PASS END=152083103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1156:0,84,255:40,0 chr1 152083104 . C . PASS END=152083105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 152083106 . T . PASS END=152083106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152083107 . C . PASS END=152083129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:26,0 chr1 152083130 . C . PASS END=152083130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 152083131 . G . PASS END=152083147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 152083148 . G . PASS END=152083150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 152083151 . G . PASS END=152083154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 152083155 . G . PASS END=152083196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,570:0,43,255:19,0 chr1 152083197 . C . PASS END=152083201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 152083202 . G . PASS END=152083204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:20:0,49,729:0,49,255:19,0 chr1 152083205 . C . PASS END=152083206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152083207 . T . PASS END=152083207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 152083208 . T . PASS END=152083210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152083211 . C . PASS END=152083232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,690:0,57,255:19,0 chr1 152083233 . C . PASS END=152083233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:17,0 chr1 152083234 . C . PASS END=152083254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:43:20:0,43,652:0,43,255:20,0 chr1 152083255 . T . PASS END=152083256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152083257 . C . PASS END=152083257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 152083258 . G . PASS END=152083260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 152083261 . A . PASS END=152083261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 152083262 . G . PASS END=152083262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152083263 . A . PASS END=152083263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,560:0,5,255:18,0 chr1 152083264 . A . PASS END=152083265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 152083266 . C . PASS END=152083268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152083269 . T . PASS END=152083293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 152083294 . G . PASS END=152083314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 152083315 . T . PASS END=152083315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 152083316 . G . PASS END=152083341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,831:0,69,255:24,0 chr1 152083342 . A . PASS END=152083343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 152083344 . C . PASS END=152083353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 152083354 . C . PASS END=152083354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 152083355 . C . PASS END=152083359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 152083360 . T . PASS END=152083360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152083361 . C . PASS END=152083363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 152083364 . T . PASS END=152083364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 152083365 . C . PASS END=152083365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152083366 . T . PASS END=152083366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 152083367 . T . PASS END=152083376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 152083377 . C . PASS END=152083377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 152083378 . T . PASS END=152083380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152083381 . C . PASS END=152083383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152083384 . T . PASS END=152083387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 152083388 . A . PASS END=152083394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:20:0,52,776:0,52,255:19,0 chr1 152083395 . G . PASS END=152083396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152083397 . C . PASS END=152083397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 152083398 . C . PASS END=152083398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152083399 . C . PASS END=152083399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 152083400 . G . PASS END=152083400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 152083401 . G . PASS END=152083405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 152083406 . G . PASS END=152083407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152083408 . T . PASS END=152083408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 152083409 . C . PASS END=152083412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152083413 . T . PASS END=152083414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 152083415 . C . PASS END=152083416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152083417 . T . PASS END=152083417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 152083418 . G . PASS END=152083420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 152083421 . G . PASS END=152083421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 152083422 . C . PASS END=152083426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152083427 . G . PASS END=152083427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 152083428 . G . PASS END=152083429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152083430 . G . PASS END=152083447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:16:0,43,568:0,43,255:19,0 chr1 152083448 . G . PASS END=152083448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 152083449 . C . PASS END=152083450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 152083451 . A . PASS END=152083451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 152083452 . T . PASS END=152083462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,530:0,51,255:17,0 chr1 152083463 . T . PASS END=152083463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr1 152083464 . C . PASS END=152083466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:17,0 chr1 152083467 . C . PASS END=152083467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 152083468 . C . PASS END=152083481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 152083482 . T . PASS END=152083484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 152083485 . C . PASS END=152083486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 152083487 . C . PASS END=152083493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,460:0,31,255:12,0 chr1 152083494 . T . PASS END=152083494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:11,0 chr1 152083495 . T . PASS END=152083496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152083497 . G . PASS END=152083497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr1 152083498 . C . PASS END=152083504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 152083505 . T . PASS END=152083505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 152083506 . C . PASS END=152083506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152083507 . T . PASS END=152083507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr1 152083508 . G . PASS END=152083511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 152083512 . T . PASS END=152083513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 152083514 . C . PASS END=152083518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 152083519 . T . PASS END=152083519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 152083520 . T . PASS END=152083520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 152083521 . G . PASS END=152083521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 152083522 . C . PASS END=152083523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 152083524 . G . PASS END=152083524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 152083525 . G . PASS END=152083526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 152083527 . C . PASS END=152083530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 152083531 . G . PASS END=152083531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 152083532 . A . PASS END=152083533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 152083534 . T . PASS END=152083534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 152083535 . A . PASS END=152083539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 152083540 . T . PASS END=152083543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152083544 . T . PASS END=152083551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152083552 . G . PASS END=152083552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 152083553 . C . PASS END=152083555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152083556 . C . PASS END=152083557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 152083558 . G . PASS END=152083558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 152083559 . C . PASS END=152083566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 152083567 . T . PASS END=152083583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 152083584 . C . PASS END=152083588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 152083589 . G . PASS END=152083595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152083596 . G . PASS END=152083597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152083598 . T . PASS END=152083642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,310:0,24,255:9,0 chr1 152083643 . C . PASS END=152083645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 152083646 . G . PASS END=152083657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152083658 . C . PASS END=152083668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 152083669 . T . PASS END=152083682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 152083683 . C . PASS END=152083694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 152083695 . C . PASS END=152083712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,590:0,41,255:19,0 chr1 152083713 . C . PASS END=152083713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152083714 . T . PASS END=152083716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152083717 . A . PASS END=152083717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,576:0,5,255:17,0 chr1 152083718 . G . PASS END=152083718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr1 152083719 . C . PASS END=152083722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152083723 . T . PASS END=152083723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 152083724 . G . PASS END=152083733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr1 152083734 . T . PASS END=152083734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,602:0,3,255:19,0 chr1 152083735 . T . PASS END=152083746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr1 152083747 . C . PASS END=152083747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 152083748 . G . PASS END=152083748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152083749 . C . PASS END=152083749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:21,0 chr1 152083750 . C . PASS END=152083750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152083751 . T . PASS END=152083752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:24:0,36,780:0,36,255:23,0 chr1 152083753 . A . PASS END=152083754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152083755 . T . PASS END=152083755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,762:0,20,255:22,0 chr1 152083756 . T . PASS END=152083766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,795:0,69,255:23,0 chr1 152083767 . C . PASS END=152083767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 152083768 . C . PASS END=152083771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:24,0 chr1 152083772 . C . PASS END=152083772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,884:0,34,255:22,0 chr1 152083773 . C . PASS END=152083777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,930:0,62,255:24,0 chr1 152083778 . G . PASS END=152083778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:23,0 chr1 152083779 . C . PASS END=152083784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,878:0,62,255:24,0 chr1 152083785 . G . PASS END=152083786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:23,0 chr1 152083787 . T . PASS END=152083792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 152083793 . G . PASS END=152083793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 152083794 . C . PASS END=152083803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 152083804 . C . PASS END=152083804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:24,0 chr1 152083805 . G . PASS END=152083812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 152083813 . T . PASS END=152083815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152083816 . T . PASS END=152083816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 152083817 . C . PASS END=152083818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 152083819 . G . PASS END=152083819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 152083820 . G . PASS END=152083824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 152083825 . T . PASS END=152083864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,67,255:26,0 chr1 152083865 . G . PASS END=152083866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,685:0,52,255:20,0 chr1 152083867 . C . PASS END=152083875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr1 152083876 . T . PASS END=152083876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 152083877 . C . PASS END=152083878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 152083879 . T . PASS END=152083880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 152083881 . G . PASS END=152083884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,845:0,69,255:24,0 chr1 152083885 . T . PASS END=152083886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 152083887 . C . PASS END=152083892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,914:0,69,255:24,0 chr1 152083893 . C . PASS END=152083893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 152083894 . T . PASS END=152083894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152083895 . G . PASS END=152083895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 152083896 . C . PASS END=152083903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 152083904 . T . PASS END=152083904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,748:0,41,255:17,0 chr1 152083905 . C . PASS END=152083906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 152083907 . C . PASS END=152083917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:20:0,54,810:0,59,255:19,0 chr1 152083918 . C . PASS END=152083929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 152083930 . T . PASS END=152083930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 152083931 . G . PASS END=152083931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 152083932 . C . PASS END=152083936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 152083937 . G . PASS END=152083939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 152083940 . T . PASS END=152083967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,845:0,69,255:23,0 chr1 152083968 . G . PASS END=152083983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:17:0,45,675:0,51,255:18,0 chr1 152083984 . T . PASS END=152083991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 152083992 . C . PASS END=152083993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152083994 . G . PASS END=152083994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 152083995 . C . PASS END=152083995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152083996 . C . PASS END=152083996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 152083997 . G . PASS END=152084001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 152084002 . T . PASS END=152084014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 152084015 . G . PASS END=152084015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 152084016 . C . PASS END=152084019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152084020 . A . PASS END=152084020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 152084021 . G . PASS END=152084027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 152084028 . C . PASS END=152084030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 152084031 . C . PASS END=152084031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 152084032 . T . PASS END=152084040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,537:0,48,255:17,0 chr1 152084041 . T . PASS END=152084041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 152084042 . T . PASS END=152084054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 152084055 . G . PASS END=152084055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 152084056 . C . PASS END=152084060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 152084061 . C . PASS END=152084064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152084065 . T . PASS END=152084065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 152084066 . C . PASS END=152084066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:20,0 chr1 152084067 . C . PASS END=152084069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152084070 . C . PASS END=152084070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:20,0 chr1 152084071 . T . PASS END=152084072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 152084073 . G . PASS END=152084074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:46:21:0,46,682:0,46,255:23,0 chr1 152084075 . G . PASS END=152084076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 152084077 . C . PASS END=152084078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 152084079 . T . PASS END=152084080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152084081 . G . PASS END=152084082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr1 152084083 . T . PASS END=152084083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152084084 . G . PASS END=152084084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 152084085 . T . PASS END=152084085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:27:25:0,27,725:0,27,255:20,0 chr1 152084086 . T . PASS END=152084087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 152084088 . C . PASS END=152084088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 152084089 . T . PASS END=152084089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152084090 . C . PASS END=152084091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 152084092 . C . PASS END=152084093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:24,0 chr1 152084094 . C . PASS END=152084094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152084095 . C . PASS END=152084097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,986:0,67,255:26,0 chr1 152084098 . A . PASS END=152084098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152084099 . A . PASS END=152084099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:27,0 chr1 152084100 . C . PASS END=152084101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152084102 . G . PASS END=152084102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 152084103 . C . PASS END=152084104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152084105 . G . PASS END=152084105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 152084106 . C . PASS END=152084109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152084110 . A . PASS END=152084110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,834:0,56,255:26,0 chr1 152084111 . G . PASS END=152084111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152084112 . C . PASS END=152084113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:26,0 chr1 152084114 . T . PASS END=152084114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:26,0 chr1 152084115 . C . PASS END=152084115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 152084116 . T . PASS END=152084116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:27,0 chr1 152084117 . C . PASS END=152084117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152084118 . T . PASS END=152084118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:27,0 chr1 152084119 . T . PASS END=152084119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152084120 . C . PASS END=152084120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 152084121 . C . PASS END=152084121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 152084122 . T . PASS END=152084122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 152084123 . C . PASS END=152084125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 152084126 . C . PASS END=152084126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 152084127 . C . PASS END=152084129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr1 152084130 . G . PASS END=152084130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 152084131 . C . PASS END=152084137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:33,0 chr1 152084138 . G . PASS END=152084138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:31,0 chr1 152084139 . C . PASS END=152084146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:33,0 chr1 152084147 . C . PASS END=152084147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:30,0 chr1 152084148 . G . PASS END=152084153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:33:0,93,1395:0,99,255:35,0 chr1 152084154 . C . PASS END=152084156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:36,0 chr1 152084157 . C . PASS END=152084157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:1:39:0,1,1263:0,1,255:34,0 chr1 152084158 . T . PASS END=152084158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 152084159 . C . LowGQ END=152084160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:0:40:0,0,1084:35,0,255:35,0 chr1 152084161 . T . PASS END=152084164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1459:0,84,255:39,0 chr1 152084165 . C . PASS END=152084165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:37,0 chr1 152084166 . C . LowGQ END=152084166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:0:40:0,0,1092:68,0,255:33,0 chr1 152084167 . C . PASS END=152084171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:41:0,85,1468:0,85,255:40,0 chr1 152084172 . T . LowGQ END=152084174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,8:45:0:44:0,0,1036:89,0,255:36,0 chr1 152084175 . TTGCTGCTCGCGCCTCTCC T,TTGCTGCTCGCGCCTCTCCTGCTGCTCGCGCCTCTCC, 50.00 PASS DP=50;MQ=233.83;MQRankSum=-1.548;ReadPosRankSum=0.642;FractionInformativeReads=0.640;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:15,1,16,0:0.031,0.500,0.000:32:4,0,8,0:11,1,8,0:48:79,663,701,0,622,50,668,1292,621,1290:255,0,255:29,13:5.0000e+01,4.5000e+02,4.5000e+02,6.4715e-05,4.5000e+02,5.3086e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,29.00,58.00,32.00,34.77,63.77,63.77,37.77:9,6,9,8:6,9,10,7 chr1 152084176 . T . LowGQ END=152084176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:46:0,0,1226:109,0,255:40,2 chr1 152084177 . G . PASS END=152084178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1561:0,69,255:39,2 chr1 152084179 . T . PASS END=152084180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:30:46:0,30,1528:0,30,255:39,2 chr1 152084181 . C . PASS END=152084182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1567:0,66,255:39,2 chr1 152084183 . C . PASS END=152084183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:24:44:0,24,1443:0,24,255:37,3 chr1 152084184 . G . LowGQ END=152084184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:0:44:0,0,1343:15,0,255:38,2 chr1 152084185 . C . PASS END=152084186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:24:44:0,24,1429:0,24,255:36,2 chr1 152084187 . C . PASS END=152084187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1499:0,66,255:37,2 chr1 152084188 . C . PASS END=152084188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:30:46:0,30,1490:0,30,255:37,2 chr1 152084189 . T . PASS END=152084189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:27:45:0,27,1467:0,27,255:35,2 chr1 152084190 . C . PASS END=152084190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1676:0,75,255:40,2 chr1 152084191 . T . PASS END=152084191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1592:0,58,255:39,2 chr1 152084192 . C . PASS END=152084193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1676:0,75,255:40,2 chr1 152084194 . T . PASS END=152084212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:41:0,83,1493:0,83,255:40,0 chr1 152084213 . C . PASS END=152084213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:18:42:0,18,1373:0,18,255:35,0 chr1 152084214 . C . PASS END=152084215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,108,1620:0,120,255:36,0 chr1 152084216 . C . PASS END=152084216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1357:0,62,255:35,0 chr1 152084217 . C . PASS END=152084220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:36,0 chr1 152084221 . A . PASS END=152084221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:39:39:0,39,1295:0,39,255:34,0 chr1 152084222 . G . PASS END=152084223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:34,0 chr1 152084224 . T . PASS END=152084224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1188:0,28,255:34,0 chr1 152084225 . T . PASS END=152084226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:34,0 chr1 152084227 . A . PASS END=152084227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:20:38:0,20,1263:0,20,255:32,0 chr1 152084228 . G . LowGQ END=152084228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:0:38:0,0,1131:19,0,255:32,0 chr1 152084229 . C . PASS END=152084229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 152084230 . C . PASS END=152084230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1186:0,28,255:32,0 chr1 152084231 . A . PASS END=152084232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:2:37:0,2,1044:0,2,255:32,0 chr1 152084233 . C . PASS END=152084233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1239:0,42,255:33,0 chr1 152084234 . G . PASS END=152084234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:1:39:0,1,1241:0,1,255:34,0 chr1 152084235 . T . PASS END=152084235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1087:0,28,255:32,0 chr1 152084236 . T . PASS END=152084238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:37:0,98,1365:0,98,255:34,0 chr1 152084239 . C . PASS END=152084239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:34,0 chr1 152084240 . G . PASS END=152084241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:34,0 chr1 152084242 . C . PASS END=152084242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 152084243 . T . PASS END=152084385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1352:0,84,255:40,0 chr1 152084386 . T . PASS END=152084386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1388:0,79,255:39,0 chr1 152084387 . G . PASS END=152084406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:98:40:0,98,1415:0,98,255:40,0 chr1 152084407 . T . PASS END=152084407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1305:0,73,255:36,0 chr1 152084408 . G . PASS END=152084417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1349:0,87,255:39,0 chr1 152084418 . C . PASS END=152084418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:50:40:0,50,1299:0,50,255:31,0 chr1 152084419 . A . PASS END=152084420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,104,255:33,0 chr1 152084421 . C . PASS END=152084421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1380:0,73,255:32,0 chr1 152084422 . T . PASS END=152084433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1205:0,91,255:34,0 chr1 152084434 . C . PASS END=152084437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:26,0 chr1 152084438 . G . PASS END=152084438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1094:0,25,255:24,0 chr1 152084439 . C . PASS END=152084439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:34:0,75,1125:0,86,255:25,0 chr1 152084440 . T . PASS END=152084440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1061:0,38,255:24,0 chr1 152084441 . G . PASS END=152084441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:25,0 chr1 152084442 . C . PASS END=152084443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152084444 . G . PASS END=152084444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:25,0 chr1 152084445 . C . PASS END=152084447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,953:0,65,255:25,0 chr1 152084448 . G . PASS END=152084449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:22,0 chr1 152084450 . G . PASS END=152084450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:22,0 chr1 152084451 . C . PASS END=152084451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:22,0 chr1 152084452 . C . PASS END=152084452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 152084453 . T . PASS END=152084453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:20,0 chr1 152084454 . C . PASS END=152084455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,64,255:20,0 chr1 152084456 . G . PASS END=152084456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,880:0,50,255:20,0 chr1 152084457 . C . PASS END=152084458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:21,0 chr1 152084459 . G . PASS END=152084460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 152084461 . T . PASS END=152084461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152084462 . G . PASS END=152084463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:23:0,33,814:0,33,255:22,0 chr1 152084464 . T . PASS END=152084464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 152084465 . C . PASS END=152084469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr1 152084470 . C . PASS END=152084470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:20,0 chr1 152084471 . T . PASS END=152084471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:20,0 chr1 152084472 . C . PASS END=152084472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 152084473 . A . PASS END=152084473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:18,0 chr1 152084474 . G . PASS END=152084474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,823:0,31,255:17,0 chr1 152084475 . C . PASS END=152084475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 152084476 . T . PASS END=152084476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:19,0 chr1 152084477 . G . PASS END=152084479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:21,0 chr1 152084480 . G . PASS END=152084480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,876:0,34,255:19,0 chr1 152084481 . C . PASS END=152084483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,64,255:21,0 chr1 152084484 . G . PASS END=152084484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,820:0,20,255:19,0 chr1 152084485 . C . PASS END=152084485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,886:0,61,255:22,0 chr1 152084486 . G . PASS END=152084486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:22,0 chr1 152084487 . C . PASS END=152084487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152084488 . C . PASS END=152084489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:20,0 chr1 152084490 . C . PASS END=152084490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 152084491 . A . PASS END=152084492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 152084493 . C . PASS END=152084493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152084494 . T . PASS END=152084494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 152084495 . G . PASS END=152084495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,743:0,14,255:20,0 chr1 152084496 . C . PASS END=152084497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152084498 . G . PASS END=152084498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 152084499 . C . PASS END=152084499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152084500 . T . PASS END=152084512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:22:0,44,765:0,44,255:19,0 chr1 152084513 . G . PASS END=152084513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,706:0,22,255:17,0 chr1 152084514 . C . PASS END=152084515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 152084516 . G . PASS END=152084516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr1 152084517 . C . PASS END=152084522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 152084523 . C . PASS END=152084523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr1 152084524 . C . PASS END=152084527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 152084528 . G . PASS END=152084528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:19,0 chr1 152084529 . C . PASS END=152084533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr1 152084534 . G . PASS END=152084534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr1 152084535 . C . PASS END=152084537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:18,0 chr1 152084538 . G . PASS END=152084538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:18,0 chr1 152084539 . C . PASS END=152084539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:17,0 chr1 152084540 . G . PASS END=152084541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:17,0 chr1 152084542 . C . PASS END=152084542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:17,0 chr1 152084543 . T . PASS END=152084544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:17,0 chr1 152084545 . A . LowGQ END=152084546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,541:17,0,255:17,0 chr1 152084547 . C . PASS END=152084547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 152084548 . T . PASS END=152084548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 152084549 . G . PASS END=152084550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,735:0,47,255:19,0 chr1 152084551 . T . LowGQ END=152084552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,612:0,0,255:18,0 chr1 152084553 . C . PASS END=152084553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 152084554 . T . PASS END=152084555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 152084556 . G . PASS END=152084556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:18,0 chr1 152084557 . C . LowGQ END=152084557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,551:31,0,255:18,0 chr1 152084558 . G . PASS END=152084558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 152084559 . C . PASS END=152084559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152084560 . C . PASS END=152084561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:19,0 chr1 152084562 . C . PASS END=152084562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr1 152084563 . A . LowGQ END=152084563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,599:15,0,255:19,0 chr1 152084564 . G . PASS END=152084564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:20,0 chr1 152084565 . C . PASS END=152084565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:20,0 chr1 152084566 . T . PASS END=152084566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 152084567 . G . PASS END=152084567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,625:0,24,255:20,0 chr1 152084568 . C . PASS END=152084574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,790:0,63,255:23,0 chr1 152084575 . C . PASS END=152084575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,705:0,25,255:24,0 chr1 152084576 . G . PASS END=152084576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 152084577 . C . PASS END=152084577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152084578 . C . PASS END=152084578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1014:0,43,255:26,0 chr1 152084579 . T . PASS END=152084579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:26,0 chr1 152084580 . C . PASS END=152084580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 152084581 . T . PASS END=152084582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1008:0,60,255:26,0 chr1 152084583 . C . PASS END=152084583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152084584 . T . PASS END=152084585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 152084586 . C . PASS END=152084586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152084587 . T . PASS END=152084587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 152084588 . C . PASS END=152084592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152084593 . T . PASS END=152084593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 152084594 . C . PASS END=152084595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 152084596 . C . PASS END=152084605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 152084606 . G . PASS END=152084606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,925:0,53,255:24,0 chr1 152084607 . C . PASS END=152084612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:25,0 chr1 152084613 . G . PASS END=152084613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:22,0 chr1 152084614 . C . PASS END=152084623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,64,255:26,0 chr1 152084624 . C . PASS END=152084624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1000:0,38,255:25,0 chr1 152084625 . C . PASS END=152084625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 152084626 . T . PASS END=152084626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152084627 . C . PASS END=152084627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:25,0 chr1 152084628 . C . PASS END=152084630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 152084631 . C . PASS END=152084631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:26,0 chr1 152084632 . T . PASS END=152084635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 152084636 . G . PASS END=152084637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152084638 . C . PASS END=152084638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 152084639 . T . PASS END=152084639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152084640 . C . PASS END=152084643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1043:0,60,255:28,0 chr1 152084644 . T . PASS END=152084645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152084646 . C . PASS END=152084647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 152084648 . G . PASS END=152084648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 152084649 . C . PASS END=152084654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 152084655 . C . PASS END=152084656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:30,0 chr1 152084657 . T . PASS END=152084657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1017:0,52,255:28,0 chr1 152084658 . C . PASS END=152084659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1150:0,85,255:30,0 chr1 152084660 . C . PASS END=152084660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:30,0 chr1 152084661 . C . PASS END=152084661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 152084662 . T . PASS END=152084662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1185:0,86,255:30,0 chr1 152084663 . C . PASS END=152084663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:29,0 chr1 152084664 . C . PASS END=152084665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1111:0,82,255:30,0 chr1 152084666 . G . PASS END=152084666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:41:34:0,41,1080:0,41,255:30,0 chr1 152084667 . C . PASS END=152084668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:66:33:0,66,1145:0,66,255:31,0 chr1 152084669 . C . PASS END=152084671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1025:0,30,255:32,0 chr1 152084672 . G . PASS END=152084674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:44:36:0,44,1125:0,44,255:33,0 chr1 152084675 . T . PASS END=152084675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:33,0 chr1 152084676 . C . PASS END=152084676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:33,0 chr1 152084677 . A . PASS END=152084677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1128:0,88,255:34,0 chr1 152084678 . G . PASS END=152084678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1164:0,58,255:33,0 chr1 152084679 . C . PASS END=152084679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1211:0,88,255:34,0 chr1 152084680 . T . PASS END=152084680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1224:0,58,255:33,0 chr1 152084681 . G . PASS END=152084681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:34,0 chr1 152084682 . C . PASS END=152084682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:56:35:0,56,1167:0,56,255:32,0 chr1 152084683 . T . PASS END=152084684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1213:0,88,255:34,0 chr1 152084685 . C . PASS END=152084685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1153:0,41,255:32,0 chr1 152084686 . T . PASS END=152084686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:33,0 chr1 152084687 . C . PASS END=152084687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:32,0 chr1 152084688 . G . PASS END=152084688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1039:0,39,255:30,0 chr1 152084689 . C . PASS END=152084690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1100:0,55,255:31,0 chr1 152084691 . C . PASS END=152084692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:32,0 chr1 152084693 . T . PASS END=152084693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1118:0,88,255:32,0 chr1 152084694 . C . PASS END=152084694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:32,0 chr1 152084695 . T . PASS END=152084695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1205:0,64,255:33,0 chr1 152084696 . C . PASS END=152084696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:30:37:0,30,1086:0,30,255:31,0 chr1 152084697 . C . PASS END=152084698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1235:0,91,255:34,0 chr1 152084699 . C . PASS END=152084699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:23:37:0,23,1129:0,23,255:32,0 chr1 152084700 . C . PASS END=152084726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1254:0,80,255:37,0 chr1 152084727 . G . PASS END=152084728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:36:0,61,1225:0,61,255:33,0 chr1 152084729 . G . PASS END=152084729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1227:0,91,255:33,0 chr1 152084730 . C . PASS END=152084730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:32,0 chr1 152084731 . C . PASS END=152084734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1239:0,89,255:34,0 chr1 152084735 . C . PASS END=152084735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:33,0 chr1 152084736 . C . PASS END=152084737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1225:0,89,255:34,0 chr1 152084738 . C . PASS END=152084738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1108:0,55,255:31,0 chr1 152084739 . C . PASS END=152084740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1213:0,88,255:34,0 chr1 152084741 . G . PASS END=152084741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:30,0 chr1 152084742 . C . PASS END=152084745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1233:0,86,255:32,0 chr1 152084746 . T . PASS END=152084747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:31,0 chr1 152084748 . G . PASS END=152084749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 152084750 . G . PASS END=152084753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:32:0,69,1117:0,69,255:26,0 chr1 152084754 . C . PASS END=152084760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 152084761 . T . PASS END=152084766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:76:27:0,76,1072:0,76,255:26,0 chr1 152084767 . T . PASS END=152084768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152084769 . G . PASS END=152084771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 152084772 . C . PASS END=152084774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 152084775 . T . PASS END=152084775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,845:0,37,255:24,0 chr1 152084776 . A . PASS END=152084777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152084778 . T . PASS END=152084778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,874:0,15,255:24,0 chr1 152084779 . T . PASS END=152084784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 152084785 . T . PASS END=152084815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:26:0,60,900:0,70,255:26,0 chr1 152084816 . C . PASS END=152084816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,911:0,45,255:20,0 chr1 152084817 . C . PASS END=152084843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,792:0,63,255:26,0 chr1 152084844 . C . PASS END=152084847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:27,0 chr1 152084848 . T . PASS END=152084848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 152084849 . C . PASS END=152084849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,764:0,47,255:25,0 chr1 152084850 . C . PASS END=152084864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:25,0 chr1 152084865 . C . LowGQ END=152084865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,617:11,0,255:21,0 chr1 152084866 . T . PASS END=152084866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152084867 . C . LowGQ END=152084867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,6:26:0:26:0,0,579:22,0,255:19,0 chr1 152084868 . T . PASS END=152084873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,921:0,62,255:25,0 chr1 152084874 . C . PASS END=152084881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 152084882 . G . PASS END=152084884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152084885 . C . PASS END=152084886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152084887 . C . PASS END=152084899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,917:0,67,255:26,0 chr1 152084900 . G . PASS END=152084900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152084901 . C . PASS END=152084901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,845:0,34,255:24,0 chr1 152084902 . T . PASS END=152084902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152084903 . C . PASS END=152084903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 152084904 . C . PASS END=152084914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 152084915 . A . PASS END=152084915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 152084916 . C . PASS END=152084923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152084924 . C . PASS END=152084924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 152084925 . T . PASS END=152084927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152084928 . C . PASS END=152084951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,909:0,64,255:25,0 chr1 152084952 . C . PASS END=152084952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 152084953 . C . PASS END=152084973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,870:0,61,255:26,0 chr1 152084974 . T . PASS END=152084996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,720:0,42,255:19,0 chr1 152084997 . C . PASS END=152084997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 152084998 . T . PASS END=152085004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 152085005 . T . PASS END=152085005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:16,0 chr1 152085006 . T . PASS END=152085010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 152085011 . G . PASS END=152085011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 152085012 . C . PASS END=152085016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 152085017 . T . PASS END=152085017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:16,0 chr1 152085018 . C . PASS END=152085020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 152085021 . C . PASS END=152085021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 152085022 . T . PASS END=152085023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 152085024 . G . PASS END=152085024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 152085025 . C . PASS END=152085025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 152085026 . G . PASS END=152085026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 152085027 . G . PASS END=152085032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 152085033 . C . PASS END=152085035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 152085036 . C . PASS END=152085045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:14,0 chr1 152085046 . A . PASS END=152085049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152085050 . G . PASS END=152085051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152085052 . T . PASS END=152085059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 152085060 . T . PASS END=152085062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152085063 . C . PASS END=152085063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 152085064 . A . PASS END=152085070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr1 152085071 . C . PASS END=152085071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 152085072 . T . PASS END=152085075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 152085076 . T . PASS END=152085076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 152085077 . C . PASS END=152085108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,570:0,40,255:18,0 chr1 152085109 . C . PASS END=152085117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:21,0 chr1 152085118 . T . PASS END=152085119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 152085120 . C . PASS END=152085120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,743:0,39,255:19,0 chr1 152085121 . T . PASS END=152085121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152085122 . C . PASS END=152085122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 152085123 . T . PASS END=152085129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr1 152085130 . G . PASS END=152085130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,795:0,36,255:23,0 chr1 152085131 . C . PASS END=152085137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 152085138 . C . PASS END=152085147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,882:0,84,255:29,0 chr1 152085148 . T . PASS END=152085148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:28,0 chr1 152085149 . C . PASS END=152085153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152085154 . C . PASS END=152085154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 152085155 . A . PASS END=152085156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152085157 . T . PASS END=152085157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1001:0,51,255:28,0 chr1 152085158 . C . PASS END=152085164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1028:0,87,255:30,0 chr1 152085165 . T . PASS END=152085165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 152085166 . T . PASS END=152085172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 152085173 . A . PASS END=152085173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 152085174 . C . PASS END=152085175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152085176 . G . PASS END=152085176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:28,0 chr1 152085177 . C . PASS END=152085181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 152085182 . C . PASS END=152085182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 152085183 . G . PASS END=152085194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1005:0,87,255:29,0 chr1 152085195 . C . PASS END=152085195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 152085196 . C . PASS END=152085216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1172:0,90,255:31,0 chr1 152085217 . T . PASS END=152085217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1016:0,76,255:30,0 chr1 152085218 . C . PASS END=152085218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 152085219 . T . PASS END=152085219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 152085220 . T . PASS END=152085224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1074:0,93,255:31,0 chr1 152085225 . C . PASS END=152085225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr1 152085226 . T . PASS END=152085226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152085227 . C . PASS END=152085227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1024:0,60,255:28,0 chr1 152085228 . A . PASS END=152085233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 152085234 . C . PASS END=152085234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:15:32:0,15,819:0,15,255:26,0 chr1 152085235 . T . PASS END=152085235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 152085236 . C . PASS END=152085236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1011:0,66,255:29,0 chr1 152085237 . C . PASS END=152085261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1194:0,81,255:35,0 chr1 152085262 . T . PASS END=152085262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1404:0,76,255:31,0 chr1 152085263 . G . PASS END=152085382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1202:0,84,255:40,0 chr1 152085383 . C . PASS END=152085383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:30,0 chr1 152085384 . A . PASS END=152085467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:36:0,90,1350:0,97,255:40,0 chr1 152085468 . G . PASS END=152085504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:42:0,96,1526:0,96,255:40,0 chr1 152085505 . A C, 163.42 PASS DP=42;MQ=250.00;MQRankSum=1.650;ReadPosRankSum=0.908;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,41,0:0.976,0.000:42:1,23,0:0,18,0:113:201,116,0,1583,123,1590:255,110,0:1,0:1.6342e+02,1.1342e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,16,25:0,1,24,17 chr1 152085506 . G . PASS END=152085525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:37:0,89,1421:0,89,255:37,0 chr1 152085526 . A . PASS END=152085526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1109:0,61,255:31,0 chr1 152085527 . G . PASS END=152085532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 152085533 . C . PASS END=152085542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:23,0 chr1 152085543 . G . PASS END=152085554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,56,255:19,0 chr1 152086419 . C . PASS END=152086554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:37:0,97,1299:0,97,255:40,0 chr1 152086555 . A . PASS END=152086555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:17:37:0,17,1202:0,17,255:30,2 chr1 152086556 . T . PASS END=152086556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:38:37:0,38,1209:0,38,255:32,1 chr1 152127220 . T . PASS END=152127417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:35:0,93,1264:0,94,255:40,0 chr1 152127418 . A . PASS END=152127444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1155:0,90,255:30,0 chr1 152127445 . G . PASS END=152127450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr1 152127451 . C . PASS END=152127451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152127452 . T . PASS END=152127454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 152127455 . T C, 49.37 PASS DP=31;MQ=249.09;MQRankSum=4.704;ReadPosRankSum=2.521;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,14,0:0.452,0.000:31:8,5,0:9,9,0:48:84,0,50,501,600,1101:255,0,255:12,0:4.9368e+01,7.1964e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,5,9:8,9,8,6 chr1 152127456 . C . PASS END=152127492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,71,255:26,0 chr1 152127493 . C . PASS END=152127523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:24:0,63,945:0,65,255:24,0 chr1 152127524 . C . PASS END=152127525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 152127526 . A . PASS END=152127526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 152127527 . C . PASS END=152127530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 152127531 . A . PASS END=152127531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 152127532 . T . PASS END=152127537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 152127538 . C . PASS END=152127539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 152127540 . A . PASS END=152127543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 152127544 . T . PASS END=152127546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 152127547 . C . PASS END=152127547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:29,0 chr1 152127548 . C . PASS END=152127549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:31,0 chr1 152127550 . T . PASS END=152127550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1044:0,68,255:30,0 chr1 152127551 . T . PASS END=152127551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 152127552 . T . PASS END=152127553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:33:0,63,1145:0,63,255:31,0 chr1 152127554 . T . PASS END=152127556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:33,0 chr1 152127557 . C . PASS END=152127557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 152127558 . A . PASS END=152127567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:34,0 chr1 152127568 . T . PASS END=152127568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:33,0 chr1 152127569 . T . PASS END=152127998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:35:0,80,1208:0,80,255:40,0 chr1 152127999 . G . PASS END=152127999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:70:63:0,70,2023:0,70,255:40,0 chr1 152128000 . C . PASS END=152128142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:89:59:0,89,1800:0,89,255:40,0 chr1 152128143 . G . PASS END=152128143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,6:64:78:64:0,78,1887:0,78,255:40,0 chr1 152128144 . C . PASS END=152128148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:62:0,108,1800:0,108,255:40,0 chr1 152128149 . T . PASS END=152128149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,6:65:73:65:0,73,1889:0,73,255:40,0 chr1 152128150 . G . PASS END=152128191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,118,1800:0,118,255:40,0 chr1 152128192 . G . PASS END=152128192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:36:60:0,36,1665:0,36,255:40,0 chr1 152128193 . G . PASS END=152128231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:57:0,80,1800:0,80,255:40,0 chr1 152128232 . T . LowGQ END=152128232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,10:62:0:62:0,0,1528:2,0,255:40,0 chr1 152128233 . T . PASS END=152128257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:86:53:0,86,1679:0,86,255:40,0 chr1 152128258 . A . PASS END=152128258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:68:52:0,68,1712:0,68,255:40,0 chr1 152128259 . T . PASS END=152128358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:81:44:0,81,1247:0,81,255:40,0 chr1 152128359 . T . PASS END=152128359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1415:0,76,255:36,0 chr1 152128360 . C . PASS END=152128364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,113,1495:0,113,255:39,0 chr1 152128365 . C . PASS END=152128365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1399:0,74,255:38,0 chr1 152128366 . A . PASS END=152128366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1443:0,57,255:37,0 chr1 152128367 . T . PASS END=152128371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1387:0,104,255:38,0 chr1 152128372 . A . PASS END=152128372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1369:0,51,255:35,0 chr1 152128373 . G . PASS END=152128377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,111,1665:0,126,255:40,0 chr1 152128378 . T . PASS END=152128378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:39,0 chr1 152128379 . T . PASS END=152128484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:37:0,84,1184:0,84,255:40,0 chr1 152128485 . C . PASS END=152128485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1243:0,59,255:33,0 chr1 152128486 . C . PASS END=152128491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1358:0,98,255:35,0 chr1 152128492 . T . PASS END=152128492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:32,0 chr1 152128493 . T . PASS END=152128495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1341:0,81,255:33,0 chr1 152128496 . C . PASS END=152128497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:36:0,72,1261:0,72,255:32,0 chr1 152128498 . G . PASS END=152128498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 152128499 . T . PASS END=152128499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1122:0,69,255:32,0 chr1 152128500 . T . PASS END=152128500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:25:36:0,25,1067:0,25,255:28,0 chr1 152128501 . T . PASS END=152128501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:47:36:0,47,1234:0,47,255:30,0 chr1 152128502 . G . PASS END=152128505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1280:0,92,255:32,0 chr1 152128506 . G . PASS END=152128506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:32,0 chr1 152128507 . A . PASS END=152128507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 152128508 . T . PASS END=152128508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1194:0,39,255:31,0 chr1 152128509 . C . PASS END=152128512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1341:0,95,255:33,0 chr1 152128513 . A . PASS END=152128513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1196:0,64,255:28,0 chr1 152128514 . T . PASS END=152128515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:40:0,90,1404:0,90,255:35,0 chr1 152128516 . A . PASS END=152128516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:12:41:0,12,1194:0,12,255:32,0 chr1 152128517 . T . PASS END=152128517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1274:0,51,255:33,0 chr1 152128518 . A . PASS END=152128518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr1 152128519 . A . PASS END=152128520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:35,0 chr1 152128521 . A . LowGQ END=152128521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:0:41:0,0,1310:1,0,255:30,0 chr1 152128522 . C . PASS END=152128529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1356:0,87,255:37,0 chr1 152128530 . T . PASS END=152128531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1268:0,65,255:33,0 chr1 152128532 . C . PASS END=152128532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 152128533 . T . PASS END=152128533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:33,0 chr1 152128534 . G . PASS END=152128534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 152128535 . T . PASS END=152128535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:31,0 chr1 152128536 . C . PASS END=152128536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:33,0 chr1 152128537 . C . PASS END=152128537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1252:0,62,255:32,0 chr1 152128538 . A . PASS END=152128538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1178:0,42,255:31,0 chr1 152128539 . T . PASS END=152128539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1365:0,98,255:34,0 chr1 152128540 . T . PASS END=152128540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:17:38:0,17,1003:0,17,255:29,0 chr1 152128541 . T . PASS END=152128541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1302:0,81,255:32,0 chr1 152128542 . G . PASS END=152128543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:67:38:0,67,1318:0,67,255:33,0 chr1 152128544 . C . PASS END=152128545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1390:0,86,255:33,0 chr1 152128546 . A . PASS END=152128546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1294:0,67,255:32,0 chr1 152128547 . T . PASS END=152128548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1333:0,95,255:35,0 chr1 152128549 . G . PASS END=152128549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:34,0 chr1 152128550 . T . PASS END=152128551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1373:0,98,255:35,0 chr1 152128552 . G . PASS END=152128552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:33,0 chr1 152128553 . G . PASS END=152128558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1229:0,91,255:33,0 chr1 152128559 . T . PASS END=152128559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1211:0,69,255:32,0 chr1 152128560 . G . PASS END=152128560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:47:36:0,47,1218:0,47,255:31,0 chr1 152128561 . A . PASS END=152128561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:20:36:0,20,1086:0,20,255:28,0 chr1 152128562 . C . PASS END=152128562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:31,0 chr1 152128563 . C . PASS END=152128563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1177:0,58,255:28,0 chr1 152128564 . T . PASS END=152128567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:33,0 chr1 152128568 . C . PASS END=152128568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 152128569 . T . PASS END=152128571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1205:0,88,255:32,0 chr1 152128572 . C . PASS END=152128572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 152128573 . T . PASS END=152128574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:32,0 chr1 152128575 . G . PASS END=152128575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,1037:0,36,255:28,0 chr1 152128576 . C . PASS END=152128577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 152128578 . G . PASS END=152128578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:41:34:0,41,1135:0,41,255:29,0 chr1 152128579 . A . PASS END=152128579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:28,0 chr1 152128580 . C . PASS END=152128580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1069:0,35,255:27,0 chr1 152128581 . T . PASS END=152128582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:29,0 chr1 152128583 . T . PASS END=152128587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1209:0,86,255:35,0 chr1 152128588 . G . PASS END=152128588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1307:0,75,255:36,0 chr1 152128589 . G . PASS END=152128608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:38:0,84,1338:0,84,255:39,0 chr1 152128609 . C . PASS END=152128609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1269:0,54,255:35,0 chr1 152128610 . G . PASS END=152128617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1260:0,87,255:39,0 chr1 152128618 . G . PASS END=152128618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1327:0,76,255:37,0 chr1 152128619 . T . PASS END=152128743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:38:0,85,1413:0,85,255:40,0 chr1 152128744 . T . PASS END=152128744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 152128745 . A . PASS END=152128817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1250:0,91,255:38,0 chr1 152128818 . G . PASS END=152128819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1078:0,74,255:26,0 chr1 152128820 . G . PASS END=152129047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:32:0,84,1241:0,89,255:40,0 chr1 152129048 . T . PASS END=152129064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:88:58:0,88,1800:0,88,255:40,0 chr1 152129065 . GTGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA G, 49.06 PASS DP=83;MQ=221.06;MQRankSum=-4.275;ReadPosRankSum=0.614;FractionInformativeReads=0.904;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,33,0:0.440,0.000:75:22,11,0:20,22,0:48:78,0,50,1371,1998,3369:0,186,255:40,0:4.9061e+01,7.5588e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,29.00,32.00,34.77,63.77,37.77:21,21,21,12:21,21,17,16 chr1 152129066 . T . PASS END=152129070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,173,255:40,0 chr1 152129071 . G . PASS END=152129071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:57:63:0,57,2086:0,57,255:40,0 chr1 152129072 . G . PASS END=152129086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:62:0,120,1800:0,172,255:40,0 chr1 152129087 . T . LowGQ END=152129087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,29:64:0:64:0,0,225:255,0,255:32,0 chr1 152129088 . T . PASS END=152129093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,176,255:40,0 chr1 152129094 . A . LowGQ END=152129094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,30:66:0:66:0,0,210:255,0,255:34,0 chr1 152129095 . C . PASS END=152129099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,173,255:40,0 chr1 152129100 . C . LowGQ END=152129101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,17:72:0:70:0,0,1449:255,0,255:40,0 chr1 152129102 . T . PASS END=152129114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,200,255:40,0 chr1 152129115 . T . LowGQ END=152129115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,16:71:0:71:0,0,1466:255,0,255:40,0 chr1 152129116 . G . PASS END=152129135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,177,255:40,0 chr1 152129136 . C . LowGQ END=152129137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,8:70:0:70:0,0,1955:62,0,255:40,0 chr1 152129138 . T . PASS END=152129145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:68:0,120,1800:0,191,255:40,0 chr1 152129146 . A . PASS END=152129146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,6:72:6:72:0,6,2234:0,6,255:40,0 chr1 152129147 . T . PASS END=152129152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,3:71:99:69:0,120,1800:0,163,255:40,0 chr1 152129153 . T . PASS END=152129436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:35:0,84,1260:0,105,255:40,0 chr1 152130228 . C . PASS END=152130350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:34:0,84,1260:0,102,255:40,0 chr1 152130351 . C . PASS END=152130359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 152130360 . A . PASS END=152130365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 152185552 . T . PASS END=152185555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1119:0,93,255:32,0 chr1 152185556 . T . PASS END=152185556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:31,0 chr1 152185557 . G . PASS END=152185558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1365:0,108,255:36,0 chr1 152185559 . T . PASS END=152185559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:35,0 chr1 152185560 . A . PASS END=152185711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:36:0,93,1317:0,95,255:40,0 chr1 152185712 . T . PASS END=152185721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,98,255:32,0 chr1 152185722 . A . PASS END=152185749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,917:0,62,255:26,0 chr1 152185750 . G A, 50.00 PASS DP=26;MQ=201.40;MQRankSum=2.451;ReadPosRankSum=2.398;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,16,0:0.615,0.000:26:4,6,0:6,10,0:47:85,0,47,543,358,901:255,0,255:9,0:5.0000e+01,8.5683e-05,5.0132e+01,4.5000e+02,3.9236e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,6,10:7,3,8,8 chr1 152185751 . T . PASS END=152185761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr1 152185762 . C G, 41.43 PASS DP=25;MQ=189.59;MQRankSum=-2.185;ReadPosRankSum=2.825;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,8,0:0.320,0.000:25:7,4,0:10,4,0:41:76,0,47,176,176,176:255,0,255:15,0:4.1431e+01,3.5595e-04,5.0000e+01,1.7620e+02,2.1097e+02,1.7921e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,11,3,5:8,9,5,3 chr1 152185763 . T . PASS END=152185766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:24,0 chr1 152185767 . C . PASS END=152185767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:22,0 chr1 152185768 . T G, 41.43 PASS DP=24;MQ=186.65;MQRankSum=-2.113;ReadPosRankSum=1.439;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,8,0:0.333,0.000:24:6,4,0:10,4,0:41:76,0,47,176,176,176:252,0,255:13,0:4.1431e+01,3.5595e-04,5.0000e+01,1.7620e+02,2.1097e+02,1.7921e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,10,3,5:8,8,5,3 chr1 152185769 . G . PASS END=152185770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152185771 . A . PASS END=152185771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 152185772 . C . PASS END=152185772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 152185773 . C . PASS END=152185773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 152185774 . A G, 41.43 PASS DP=23;MQ=183.40;MQRankSum=-2.033;ReadPosRankSum=-0.226;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:5,4,0:10,4,0:41:76,0,47,176,176,176:255,0,255:13,0:4.1431e+01,3.5595e-04,5.0000e+01,1.7620e+02,2.1097e+02,1.7921e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,9,3,5:8,7,5,3 chr1 152185775 . G . PASS END=152185779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 152185780 . G A, 41.43 PASS DP=23;MQ=181.93;MQRankSum=-1.904;ReadPosRankSum=-0.807;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:5,4,0:10,4,0:41:76,0,47,176,176,176:255,0,255:15,0:4.1431e+01,3.5595e-04,5.0000e+01,1.7620e+02,2.1097e+02,1.7921e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,10,3,5:9,6,5,3 chr1 152185781 . T . PASS END=152185788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 152185789 . G . PASS END=152185789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:23,0 chr1 152185790 . T C, 32.58 PASS DP=26;MQ=164.82;MQRankSum=-1.065;ReadPosRankSum=-0.152;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,6,0:0.231,0.000:26:9,2,0:11,4,0:33:67,0,47,167,167,167:168,0,255:19,0:3.2583e+01,2.4402e-03,5.0002e+01,1.6735e+02,2.0212e+02,1.7036e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,11,3,3:12,8,5,1 chr1 152185791 . G . PASS END=152185791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 152185792 . G A, 32.58 PASS DP=26;MQ=164.82;MQRankSum=-1.065;ReadPosRankSum=-0.274;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,6,0:0.231,0.000:26:9,2,0:11,4,0:33:67,0,47,167,167,167:160,0,255:19,0:3.2583e+01,2.4402e-03,5.0002e+01,1.6735e+02,2.0212e+02,1.7036e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,11,3,3:12,8,5,1 chr1 152185793 . C . PASS END=152185795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:23,0 chr1 152185796 . A G, 32.58 PASS DP=26;MQ=164.82;MQRankSum=-1.065;ReadPosRankSum=-1.248;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,6,0:0.231,0.000:26:9,2,0:11,4,0:33:67,0,47,167,167,167:190,0,255:18,0:3.2583e+01,2.4402e-03,5.0002e+01,1.6735e+02,2.0212e+02,1.7036e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,11,3,3:12,8,5,1 chr1 152185797 . G . PASS END=152185799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 152185800 . A . PASS END=152185814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,46,255:19,0 chr1 152185815 . C . LowGQ END=152185816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,451:89,0,255:15,0 chr1 152185817 . C . PASS END=152185818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 152185819 . A . LowGQ END=152185819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,551:53,0,255:16,0 chr1 152185820 . T . PASS END=152185822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 152185823 . C . LowGQ END=152185823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,441:76,0,255:15,0 chr1 152185824 . G . PASS END=152185825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 152185826 . C . PASS END=152185826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 152185827 . C . PASS END=152185827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 152185828 . A . PASS END=152185828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 152185829 . T . PASS END=152185829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 152185830 . A . PASS END=152185830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 152185831 . G . PASS END=152185832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 152185833 . C . LowGQ END=152185833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,512:23,0,255:16,0 chr1 152185834 . A . PASS END=152185834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 152185835 . G . PASS END=152185838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 152185839 . A . PASS END=152185841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 152185842 . G . PASS END=152185842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 152185843 . A . PASS END=152185843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 152185844 . C . PASS END=152185848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 152185849 . G . PASS END=152185849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 152185850 . C . PASS END=152185851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 152185852 . A . PASS END=152185857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 152185858 . A . PASS END=152185858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:10,0 chr1 152185859 . C . PASS END=152185859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 152185860 . G . PASS END=152185864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 152185865 . C . PASS END=152185865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 152185866 . C . PASS END=152185870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 152185871 . C . PASS END=152185873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 152185874 . G . PASS END=152185875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152185876 . A . PASS END=152185876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 152185877 . G . PASS END=152185880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152185881 . G . PASS END=152185882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 152185883 . C . PASS END=152185890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 152185891 . A . PASS END=152185891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 152185892 . G . PASS END=152185892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152185893 . A . PASS END=152185899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152185900 . C . PASS END=152185900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 152185901 . T . PASS END=152185901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 152185902 . G . PASS END=152185902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 152185903 . G . PASS END=152185908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 152185909 . G . PASS END=152185909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 152185910 . G . PASS END=152185920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 152185921 . T . PASS END=152185921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152185922 . C . PASS END=152185922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 152185923 . C . PASS END=152185950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr1 152185951 . A . PASS END=152185966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:6:0,11,180:0,11,202:6,0 chr1 152185967 . C . PASS END=152185967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 152185968 . C . PASS END=152185974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr1 152185975 . A . LowGQ END=152185975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr1 152185976 . T . PASS END=152185990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 152185991 . G . LowGQ END=152185991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152185992 . A . PASS END=152186004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 152186005 . G . PASS END=152186025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 152186026 . G . LowGQ END=152186041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:2:0,0,78:0,0,78:2,0 chr1 152186042 . A G, 41.53 PASS DP=2;MQ=42.06;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,1,0:0,1,0:5:78,6,0,78,6,78:78,6,0:0,0:4.1529e+01,4.7781e+00,1.7587e+00,7.6299e+01,3.9548e+01,7.9299e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,2:0,0,1,1 chr1 152186043 . A . PASS END=152186057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:3,0 chr1 152186058 . G . PASS END=152186073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:5,0 chr1 152186074 . A . LowGQ END=152186075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,140:3,0 chr1 152186076 . G . PASS END=152186077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:6,0 chr1 152186078 . C . PASS END=152186079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152186080 . T . PASS END=152186099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 152186100 . C . PASS END=152186100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 152186101 . G . PASS END=152186102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 152186103 . G . PASS END=152186103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 152186104 . G . PASS END=152186108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 152186109 . A . PASS END=152186109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 152186110 . G . PASS END=152186111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152186112 . A . PASS END=152186121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr1 152186122 . A . PASS END=152186122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:9,0 chr1 152186123 . C . PASS END=152186133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 152186134 . T . PASS END=152186134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 152186135 . C . PASS END=152186144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:12,0 chr1 152186145 . T . PASS END=152186145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 152186146 . A . PASS END=152186149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 152186150 . G . PASS END=152186151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 152186152 . C . PASS END=152186170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 152186171 . T . PASS END=152186171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:10,0 chr1 152186172 . G . PASS END=152186173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,411:0,36,255:12,0 chr1 152186174 . C . PASS END=152186174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 152186175 . G . PASS END=152186181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 152186182 . G . PASS END=152186182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 152186183 . C . PASS END=152186183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 152186184 . C . PASS END=152186184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 152186185 . C . PASS END=152186189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr1 152186190 . A . PASS END=152186190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr1 152186191 . C . PASS END=152186191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 152186192 . T . PASS END=152186192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 152186193 . G . PASS END=152186193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 152186194 . A . PASS END=152186204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,398:0,36,255:12,0 chr1 152186205 . A . PASS END=152186205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 152186206 . C . PASS END=152186206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 152186207 . C . PASS END=152186207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,310:0,3,255:8,0 chr1 152186208 . C . PASS END=152186208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 152186209 . A . PASS END=152186214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 152186215 . A . PASS END=152186215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 152186216 . C . PASS END=152186216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152186217 . C . PASS END=152186217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 152186218 . A . PASS END=152186218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152186219 . T . PASS END=152186219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 152186220 . A . PASS END=152186220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152186221 . G . PASS END=152186221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 152186222 . T . PASS END=152186222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:9,0 chr1 152186223 . G . PASS END=152186225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152186226 . A . LowGQ END=152186226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,278:22,0,255:8,0 chr1 152186227 . A . PASS END=152186228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 152186229 . A . PASS END=152186230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 152186231 . G . PASS END=152186232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152186233 . A . PASS END=152186233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 152186234 . C . PASS END=152186235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152186236 . T . PASS END=152186236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152186237 . G . PASS END=152186237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 152186238 . A . PASS END=152186242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152186243 . G . PASS END=152186243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152186244 . A . PASS END=152186244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 152186245 . T . PASS END=152186245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152186246 . C . PASS END=152186247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:16:11:0,16,341:0,16,255:10,0 chr1 152186248 . G . PASS END=152186255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,360:0,33,255:11,0 chr1 152186256 . C . PASS END=152186257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 152186258 . C . PASS END=152186258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 152186259 . C . PASS END=152186268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 152186269 . C . PASS END=152186269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 152186270 . T . PASS END=152186272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 152186273 . C . PASS END=152186273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 152186274 . C . PASS END=152186277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 152186278 . T . PASS END=152186278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 152186279 . C . PASS END=152186279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 152186280 . T . PASS END=152186282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 152186283 . A . PASS END=152186284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 152186285 . C . PASS END=152186285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 152186286 . C . PASS END=152186288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 152186289 . G . PASS END=152186289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 152186290 . T . PASS END=152186293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 152186294 . C . LowGQ END=152186294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 152186295 . C . PASS END=152186295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152186296 . G . PASS END=152186296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 152186297 . T . PASS END=152186298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152186299 . G . PASS END=152186300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 152186301 . C . PASS END=152186301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152186302 . A . LowGQ END=152186302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:6,0 chr1 152186303 . G . PASS END=152186303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152186304 . A . PASS END=152186304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 152186305 . G . PASS END=152186305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152186306 . G . PASS END=152186306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 152186307 . A . PASS END=152186307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 152186308 . G . PASS END=152186308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:4,0 chr1 152186309 . T . PASS END=152186312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,241:6,0 chr1 152186313 . C . PASS END=152186313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:5,0 chr1 152186314 . T . PASS END=152186314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 152186315 . G . LowGQ END=152186315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:5,0 chr1 152186316 . A . PASS END=152186317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 152186318 . C . LowGQ END=152186319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:6:0,0,177:0,0,177:5,0 chr1 152186320 . A . PASS END=152186320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 152186321 . G . LowGQ END=152186321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:5,0 chr1 152186322 . A . PASS END=152186323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 152186324 . C . PASS END=152186325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 152186326 . A . PASS END=152186328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 152186329 . C . PASS END=152186329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 152186330 . T . PASS END=152186330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 152186331 . G . PASS END=152186332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 152186333 . C . PASS END=152186333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 152186334 . T . PASS END=152186337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 152186338 . A . PASS END=152186338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 152186339 . C . PASS END=152186344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,243:7,0 chr1 152186345 . G . PASS END=152186345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 152186346 . A . PASS END=152186346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152186347 . C . LowGQ END=152186347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:7,0,217:6,0 chr1 152186348 . T . PASS END=152186348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 152186349 . G . PASS END=152186353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 152186354 . G . LowGQ END=152186354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,235:4,0,239:8,0 chr1 152186355 . A . PASS END=152186356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 152186357 . C . PASS END=152186357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 152186358 . T . PASS END=152186358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 152186359 . A . PASS END=152186360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,308:0,14,255:10,0 chr1 152186361 . A . LowGQ END=152186361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,311:6,0,255:10,0 chr1 152186362 . C . PASS END=152186363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 152186364 . C . PASS END=152186364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 152186365 . G . PASS END=152186365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 152186366 . T A, 4.57 DRAGENSnpHardQUAL DP=10;MQ=11.01;MQRankSum=0.480;ReadPosRankSum=1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,2,0:0.200,0.000:10:5,0,0:3,2,0:4:37,0,14,64,278,342:36,0,255:9,0:4.5721e+00,1.9498e+00,1.8950e+01,6.5477e+01,3.1475e+02,3.4650e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,0,2,0:5,3,0,2 chr1 152186367 . G . PASS END=152186367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 152186368 . G . PASS END=152186369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:17:11:0,17,371:0,17,255:11,0 chr1 152186370 . G . PASS END=152186378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 152186379 . C . PASS END=152186379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 152186380 . A . PASS END=152186380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 152186381 . G . PASS END=152186381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 152186382 . A . PASS END=152186390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152186391 . C . PASS END=152186391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 152186392 . T . PASS END=152186392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152186393 . A . PASS END=152186393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,323:0,8,255:11,0 chr1 152186394 . A . PASS END=152186394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 152186395 . G . PASS END=152186395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr1 152186396 . C . PASS END=152186411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 152186412 . C . PASS END=152186412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 152186413 . A . PASS END=152186415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152186416 . G . PASS END=152186417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 152186418 . T . PASS END=152186418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152186419 . G . PASS END=152186419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 152186420 . G . PASS END=152186421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152186422 . A G, 10.88 PASS DP=10;MQ=11.92;MQRankSum=0.296;ReadPosRankSum=2.166;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,3,0:0.300,0.000:10:3,2,0:4,1,0:10:45,0,14,107,242,350:80,0,255:8,0:1.0884e+01,4.5543e-01,1.7455e+01,1.0778e+02,2.7762e+02,3.5318e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,0,3,0:3,4,2,1 chr1 152186423 . G . PASS END=152186423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 152186424 . A . PASS END=152186424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,303:0,16,255:10,0 chr1 152186425 . C . PASS END=152186451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr1 152186452 . G . PASS END=152186454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 152186455 . G . PASS END=152186455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152186456 . C . PASS END=152186456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 152186457 . T . PASS END=152186459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152186460 . G . PASS END=152186465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 152186466 . G . PASS END=152186485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 152186486 . T . PASS END=152186486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 152186487 . G . PASS END=152186489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 152186490 . C . PASS END=152186490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 152186491 . G . PASS END=152186520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 152186521 . C . PASS END=152186530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 152186531 . T . PASS END=152186533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 152186534 . C . PASS END=152186536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152186537 . G . PASS END=152186537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 152186538 . A . PASS END=152186549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:25,0 chr1 152186550 . A . PASS END=152186661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:30:0,90,1133:0,90,255:40,0 chr1 152186662 . A . PASS END=152186698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:146,2:148:99:128:0,120,1800:0,255,255:40,0 chr1 152186699 . T . LowGQ END=152186699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:144,16:160:0:160:0,0,4773:101,0,255:40,0 chr1 152186700 . G . PASS END=152186765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:182,0:182:99:164:0,120,1800:0,197,255:40,0 chr1 152186766 . G A, 0.01 DRAGENSnpHardQUAL DP=160;MQ=19.26;MQRankSum=3.980;ReadPosRankSum=4.280;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:140,20,0:0.125,0.000:160:72,3,0:68,17,0:27:8,0,30,658,4945,5603:230,0,255:40,0:9.6665e-03,2.6532e+01,5.9865e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:55,85,15,5:79,61,6,14 chr1 152186767 . G . PASS END=152186803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:144,2:146:99:116:0,120,1800:0,194,255:40,0 chr1 152186804 . T . PASS END=152187145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:70:0,120,1800:0,122,255:40,0 chr1 152187146 . G . PASS END=152187182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,120,1800:0,166,255:40,0 chr1 152187183 . C A, 0.05 DRAGENSnpHardQUAL DP=67;MQ=19.52;MQRankSum=2.806;ReadPosRankSum=0.097;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:57,10,0:0.149,0.000:67:19,1,0:38,9,0:19:16,0,29,357,2038,2396:186,0,255:40,0:5.1876e-02,1.9257e+01,5.1257e+01,3.7654e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,42,1,9:33,24,8,2 chr1 152187184 . G . PASS END=152187220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,99,1582:0,99,255:40,0 chr1 152187221 . C . PASS END=152187238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:41:0,90,1441:0,90,255:40,0 chr1 152187239 . T . PASS END=152187239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 152187240 . A . PASS END=152187240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:37,0 chr1 152187241 . G . PASS END=152187275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:41:0,82,1474:0,82,255:40,0 chr1 152187276 . C . LowGQ END=152187276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,9:44:0:44:0,0,1014:164,0,255:32,0 chr1 152187277 . G . PASS END=152187296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:38:0,93,1395:0,98,255:40,0 chr1 152187297 . T . LowGQ END=152187297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:0:41:0,0,1114:32,0,255:34,0 chr1 152187298 . G . PASS END=152187302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:39:0,96,1440:0,117,255:34,0 chr1 152187303 . A . PASS END=152187303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:4:40:0,4,1226:0,4,255:33,0 chr1 152187304 . T . PASS END=152187331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1227:0,89,255:36,0 chr1 152187332 . C . PASS END=152187337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1288:0,92,255:35,0 chr1 152187338 . G . PASS END=152187338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 152187339 . T . PASS END=152187514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:36:0,81,1258:0,81,255:40,0 chr1 152187515 . C . PASS END=152187553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:75:0,120,1800:0,192,255:40,0 chr1 152187554 . C T, 13.29 PASS DP=81;MQ=17.50;MQRankSum=3.637;ReadPosRankSum=5.484;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:59,22,0:0.272,0.000:81:32,9,0:27,13,0:13:48,0,30,779,2074,2853:255,0,255:40,0:1.3294e+01,2.1051e-01,3.3211e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,27,13,9:31,28,12,10 chr1 152187555 . T . PASS END=152187561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:72:0,120,1800:0,200,255:40,0 chr1 152187562 . A C, 239.23 PASS DP=72;MQ=16.33;FractionInformativeReads=0.986 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,71,0:1.000,0.000:71:0,33,0:0,38,0:210:277,213,0,2715,213,2715:255,217,0:0,0:2.3923e+02,2.1023e+02,0.0000e+00,4.5000e+02,2.4500e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,41,30:0,0,39,32 chr1 152187563 . T . PASS END=152187583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:71:0,120,1800:0,213,255:40,0 chr1 152187584 . C . LowGQ END=152187584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,16:127:0:127:0,0,3704:164,0,255:40,0 chr1 152187585 . G . PASS END=152187588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:133,0:133:99:128:0,120,1800:0,255,255:40,0 chr1 152187589 . G A, 4.04 DRAGENSnpHardQUAL DP=134;MQ=20.11;MQRankSum=1.009;ReadPosRankSum=1.151;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:111,23,0:0.172,0.000:134:51,9,0:60,14,0:4:37,0,28,137,137,137:255,0,255:40,0:4.0366e+00,2.1845e+00,3.2851e+01,1.3881e+02,1.7358e+02,1.4182e+02:0.00,34.77,37.78,34.77,69.54,37.78:64,47,12,11:62,49,12,11 chr1 152187590 . T . PASS END=152187605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:144,1:145:99:135:0,120,1800:0,255,255:40,0 chr1 152187606 . G . LowGQ END=152187606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:141,16:157:0:157:0,0,4626:118,0,255:40,0 chr1 152187607 . G . PASS END=152187627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:183,0:183:99:157:0,120,1800:0,255,255:40,0 chr1 152187628 . A G, 0.38 DRAGENSnpHardQUAL DP=205;MQ=21.83;MQRankSum=1.458;ReadPosRankSum=5.832;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:171,34,0:0.166,0.000:205:86,16,0:85,18,0:11:24,0,34,1216,6050,7266:255,0,255:40,0:3.7755e-01,1.0796e+01,4.7463e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:79,92,11,23:90,81,19,15 chr1 152187629 . T . PASS END=152187665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:209,1:210:99:203:0,120,1800:0,255,255:40,0 chr1 152187666 . C . PASS END=152187767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:148,1:149:81:55:0,81,1215:0,141,255:40,0 chr1 152187768 . T . PASS END=152187772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:66:42:0,66,990:0,110,255:23,0 chr1 152187773 . T . PASS END=152187783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:25,0 chr1 152187784 . A . PASS END=152187785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 152187786 . A . PASS END=152187789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 152187790 . A . PASS END=152187790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 152187791 . G . PASS END=152187796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr1 152187797 . T . PASS END=152187804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:33:21:0,33,495:0,53,255:13,0 chr1 152187805 . G . PASS END=152187809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:15:0,42,582:0,45,255:15,0 chr1 152187810 . G A, 52.68 PASS DP=16;MQ=11.51;FractionInformativeReads=0.938 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,8,0:0,7,0:41:90,45,0,550,45,550:255,48,0:0,0:5.2684e+01,4.1684e+01,3.1815e-04,4.5000e+02,7.6454e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,7:0,0,7,8 chr1 152187811 . C . PASS END=152187812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 152187813 . C . PASS END=152187813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 152187814 . A . PASS END=152187823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,693:0,60,255:26,0 chr1 152187824 . C . PASS END=152187825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 152187826 . G . PASS END=152187826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 152187827 . C . PASS END=152187847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1041:0,84,255:34,0 chr1 152187848 . G . PASS END=152187861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:35:0,98,1289:0,98,255:39,0 chr1 152187862 . A . PASS END=152187862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 152187863 . T . PASS END=152187895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1404:0,90,255:40,0 chr1 152187896 . T . PASS END=152187934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:43:0,94,1537:0,94,255:40,0 chr1 152187935 . C T, 1.41 DRAGENSnpHardQUAL DP=59;MQ=21.14;MQRankSum=4.020;ReadPosRankSum=-1.761;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:47,12,0:0.203,0.000:59:26,8,0:21,4,0:6:31,0,29,429,1636,2065:255,0,255:40,0:1.4100e+00,5.5743e+00,3.7574e+01,4.3492e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,26,11,1:20,27,9,3:152187935 chr1 152187936 . G . PASS END=152187944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:59:0,120,1800:0,164,255:40,0 chr1 152187945 . C T, 8.46 DRAGENSnpHardQUAL DP=62;MQ=21.65;MQRankSum=4.400;ReadPosRankSum=-0.040;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:46,16,0:0.258,0.000:62:26,9,0:20,7,0:8:43,0,29,572,1618,2190:255,0,255:40,0:8.4585e+00,6.7095e-01,3.2671e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,25,14,2:21,25,9,7:152187935 chr1 152187946 . A . PASS END=152187984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,167,255:40,0 chr1 152187985 . G . PASS END=152188071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,157,255:40,0 chr1 152188072 . A . PASS END=152188108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:97:0,120,1800:0,255,255:40,0 chr1 152188109 . T A, 25.84 PASS DP=100;MQ=23.28;MQRankSum=2.368;ReadPosRankSum=3.540;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:62,38,0:0.380,0.000:100:25,19,0:37,19,0:26:61,0,34,1306,2086,3392:255,0,255:40,0:2.5844e+01,1.2126e-02,3.7345e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:37,25,19,19:28,34,16,22 chr1 152188110 . G . PASS END=152188175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:102:0,120,1800:0,214,255:40,0 chr1 152188176 . G A, 0.04 DRAGENSnpHardQUAL DP=106;MQ=23.72;MQRankSum=-0.398;ReadPosRankSum=1.012;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:90,15,0:0.143,0.000:105:35,9,0:55,6,0:20:15,0,34,500,3176,3676:249,0,255:40,0:4.1011e-02,2.0270e+01,5.7603e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:50,40,6,9:37,53,8,7 chr1 152188177 . G . PASS END=152188213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:103:0,120,1800:0,255,255:40,0 chr1 152188214 . T . PASS END=152188375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,1:117:99:101:0,120,1800:0,237,255:40,0 chr1 152188376 . C . PASS END=152188412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,1:139:99:133:0,120,1800:0,255,255:40,0 chr1 152188413 . C T, 0.70 DRAGENSnpHardQUAL DP=135;MQ=30.43;MQRankSum=1.236;ReadPosRankSum=2.858;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:115,20,0:0.148,0.000:135:52,10,0:63,10,0:8:27,0,40,670,3922,4592:255,0,255:40,0:6.9789e-01,8.2845e+00,5.0951e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:58,57,5,15:61,54,11,9 chr1 152188414 . G . PASS END=152188462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:135,1:136:99:128:0,120,1800:0,255,255:40,0 chr1 152188463 . G A, 3.46 DRAGENSnpHardQUAL DP=137;MQ=29.85;MQRankSum=3.018;ReadPosRankSum=5.737;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:112,25,0:0.182,0.000:137:54,12,0:58,13,0:3:36,0,40,857,3953,4810:255,0,255:40,0:3.4557e+00,2.6066e+00,4.5273e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:59,53,9,16:65,47,14,11 chr1 152188464 . A . PASS END=152188500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:136,1:137:99:131:0,120,1800:0,255,255:40,0 chr1 152188501 . A . PASS END=152188726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:32:0,84,1260:0,86,255:40,0 chr1 152188727 . A . PASS END=152188727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:28,0 chr1 152188728 . A . PASS END=152188736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:29,0 chr1 152188737 . A . PASS END=152188737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:28,0 chr1 152188738 . C . PASS END=152188743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 152188744 . T . PASS END=152188760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:68:26:0,68,1035:0,68,255:26,0 chr1 152188761 . G . PASS END=152188768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 152188769 . C . PASS END=152188770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1008:0,68,255:27,0 chr1 152188771 . A . PASS END=152188774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:29,0 chr1 152188775 . A . PASS END=152188775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:28,0 chr1 152188776 . A . PASS END=152188776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 152188777 . G . PASS END=152188777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 152188778 . T . PASS END=152188780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152188781 . C . PASS END=152188781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 152188782 . C . PASS END=152188783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152188784 . G . PASS END=152188784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 152188785 . A . PASS END=152188785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 152188786 . G . PASS END=152188786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 152188787 . C . PASS END=152188809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1294:0,80,255:35,0 chr1 152188810 . A . PASS END=152188846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1221:0,81,255:40,0 chr1 152188847 . A G, 0.08 DRAGENSnpHardQUAL DP=50;MQ=15.60;MQRankSum=0.446;ReadPosRankSum=1.691;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:41,8,0:0.163,0.000:49:22,4,0:19,4,0:17:18,0,27,285,1434,1718:141,0,255:40,0:8.4094e-02,1.7176e+01,4.7176e+01,3.0172e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,14,5,3:20,21,5,3 chr1 152188848 . C . PASS END=152188919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,130,255:40,0 chr1 152188920 . C T, 17.18 PASS DP=67;MQ=15.76;MQRankSum=1.235;ReadPosRankSum=-0.905;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,23,0:0.343,0.000:67:26,9,0:18,14,0:17:52,0,28,786,1558,2344:255,0,255:40,0:1.7181e+01,8.7377e-02,3.1087e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,21,15,8:19,25,7,16 chr1 152188921 . G . PASS END=152188997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:48:0,120,1800:0,121,255:40,0 chr1 152188998 . C T, 0.14 DRAGENSnpHardQUAL DP=46;MQ=14.79;MQRankSum=2.430;ReadPosRankSum=1.549;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:40,6,0:0.130,0.000:46:16,3,0:24,3,0:15:20,0,22,122,122,122:91,0,255:36,0:1.4100e-01,1.4971e+01,3.9604e+01,1.3659e+02,1.7136e+02,1.3960e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,28,0,6:18,22,3,3 chr1 152188999 . G . PASS END=152189039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:32:0,81,1215:0,95,255:40,0 chr1 152189040 . A . PASS END=152189054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:26,0 chr1 152189055 . G C, 95.27 PASS DP=29;MQ=12.62;FractionInformativeReads=0.966 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,12,0:0,16,0:81:133,84,0,1083,84,1083:255,84,0:0,0:9.5272e+01,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,28:0,0,16,12 chr1 152189056 . T . PASS END=152189074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:24,0 chr1 152189075 . T . PASS END=152189092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,552:0,48,255:18,0 chr1 152189093 . C . PASS END=152189094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 152189095 . T . PASS END=152189122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,335:0,30,255:13,0 chr1 152189123 . G . PASS END=152189130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 152189131 . A . PASS END=152189131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:6,0 chr1 152189132 . C . PASS END=152189133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 152189134 . T . PASS END=152189154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,194:0,15,194:6,0 chr1 152189155 . G . LowGQ END=152189155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr1 152189156 . T . PASS END=152189158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 152189159 . C . PASS END=152189160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 152189161 . A . PASS END=152189161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 152189162 . G . PASS END=152189162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 152189163 . A . PASS END=152189164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 152189165 . G . PASS END=152189165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 152189166 . A . PASS END=152189167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr1 152189168 . T . LowGQ END=152189178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:5:0,0,94:0,0,118:3,0 chr1 152189179 . A . PASS END=152189184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:4,0 chr1 152189185 . G . LowGQ END=152189185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 152189186 . T . PASS END=152189186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 152189187 . G . LowGQ END=152189187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 152189188 . G . PASS END=152189193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 152189194 . A . LowGQ END=152189196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 152189197 . G . PASS END=152189198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 152189199 . C . LowGQ END=152189200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 152189201 . G . PASS END=152189205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 152189206 . C . LowGQ END=152189206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,2:4:0:4:0,0,45:21,0,66:2,0 chr1 152189207 . T . LowGQ END=152189241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,70:0,0,70:3,0 chr1 152189242 . A G, 2.19 DRAGENSnpHardQUAL DP=2;MQ=10.51;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:1,1,0:0,0,0:4:33,0,11,36,36,72:33,0,33:1,0:2.1870e+00,4.1977e+00,1.8198e+01,3.9967e+01,7.4748e+01,7.8747e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,1,0,1:0,1,0,1 chr1 152189243 . G . PASS END=152189277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:2,0 chr1 152189278 . G . LowDepth;LowGQ END=152189495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr1 152189496 . C . LowDepth;LowGQ END=152190058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 152190059 . T . LowGQ END=152190201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,22:0,0,31:2,0 chr1 152190202 . A . PASS END=152190203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 152190204 . C . LowGQ END=152190204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152190205 . A . PASS END=152190331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,111:0,12,111:6,0 chr1 152190332 . T . LowGQ END=152190332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:19,0,96:3,0 chr1 152190333 . G . PASS END=152190339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 152190340 . G . LowDepth;LowGQ END=152190408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 152190409 . G . PASS END=152190411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 152190412 . G . LowGQ END=152190412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 152190413 . C . PASS END=152190414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 152190415 . C . PASS END=152190421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 152190422 . T . LowGQ END=152190422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 152190423 . G . PASS END=152190423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 152190424 . A . LowGQ END=152190424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr1 152190425 . C . PASS END=152190426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 152190427 . G . LowGQ END=152190428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,100:16,0,118:4,0 chr1 152190429 . A . PASS END=152190430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:5,0 chr1 152190431 . C . LowGQ END=152190431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 152190432 . C . PASS END=152190450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr1 152190451 . G . LowGQ END=152190451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,114:15,0,129:4,0 chr1 152190452 . T C, 3.71 DRAGENSnpHardQUAL DP=6;MQ=11.00;MQRankSum=-1.231;ReadPosRankSum=1.231;FractionInformativeReads=0.833;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,2,0:0.400,0.000:5:2,2,0:1,0,0:3:36,0,8,71,107,179:76,0,98:3,0:3.7112e+00,2.7404e+00,1.3721e+01,7.4211e+01,1.4487e+02,1.8457e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,3,2,0:1,2,2,0 chr1 152190453 . G . PASS END=152190454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,172:0,18,172:6,0 chr1 152190455 . G . PASS END=152190455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:5,0 chr1 152190456 . A . PASS END=152190486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,172:0,18,172:6,0 chr1 152190487 . A . PASS END=152190487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,139:0,1,139:4,0 chr1 152190488 . C . PASS END=152190489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 152190490 . C . PASS END=152190493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,180:6,0 chr1 152190494 . G . PASS END=152190495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 152190496 . T . PASS END=152190511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 152190512 . G . PASS END=152190524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,197:0,21,197:7,0 chr1 152190525 . C . PASS END=152190558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 152190559 . C . LowGQ END=152190559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152190560 . T . PASS END=152190565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 152190566 . T . LowGQ END=152190566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152190567 . A . PASS END=152190618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 152190619 . G . PASS END=152190644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr1 152190645 . T . PASS END=152190654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 152190655 . C . PASS END=152190655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 152190656 . C . PASS END=152190661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 152190662 . G . PASS END=152190668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 152190669 . A . PASS END=152190669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 152190670 . C . PASS END=152190681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 152190682 . G A, 10.66 PASS DP=12;MQ=18.79;MQRankSum=-1.977;ReadPosRankSum=2.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,5,0:0.417,0.000:12:4,2,0:3,3,0:11:45,0,38,179,250,429:158,0,235:7,0:1.0663e+01,3.9014e-01,4.1390e+01,1.7916e+02,2.8547e+02,4.3251e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,0,5,0:4,3,2,3 chr1 152190683 . T . PASS END=152190719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 152190720 . C T, 38.18 PASS DP=13;MQ=18.31;MQRankSum=3.016;ReadPosRankSum=2.074;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,7,0:0.538,0.000:13:3,4,0:3,3,0:14:73,0,11,242,215,457:224,0,193:6,0:3.8177e+01,1.7671e-01,1.4010e+01,2.4249e+02,2.4954e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,0,7,0:3,3,4,3 chr1 152190721 . G . PASS END=152190722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 152190723 . G . PASS END=152190747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,440:0,45,255:19,0 chr1 152190748 . G . PASS END=152190757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 152190758 . C . PASS END=152190758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152190759 . C . PASS END=152190763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,774:0,53,255:19,0 chr1 152190764 . C . PASS END=152190779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,776:0,66,255:26,0 chr1 152190780 . A . PASS END=152190781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 152190782 . C . PASS END=152190782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 152190783 . C . PASS END=152190785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 152190786 . A . PASS END=152190786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 152190787 . G . PASS END=152190797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1105:0,93,255:36,0 chr1 152190798 . C . PASS END=152190806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:35,0 chr1 152190807 . A . PASS END=152190807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:31,0 chr1 152190808 . A . PASS END=152190834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1418:0,87,255:40,0 chr1 152190835 . G A, 42.88 PASS DP=47;MQ=31.70;MQRankSum=0.267;ReadPosRankSum=1.887;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,25,0:0.532,0.000:47:11,10,0:11,15,0:40:78,0,40,876,729,1605:255,0,255:21,0:4.2875e+01,4.2170e-04,4.3419e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,12,13:11,11,13,12 chr1 152190836 . C . PASS END=152190872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:47:0,86,1645:0,86,255:40,0 chr1 152190873 . G . PASS END=152190907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,129,255:40,0 chr1 152190908 . T . PASS END=152190944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:89:47:0,89,1652:0,89,255:40,0 chr1 152190945 . C T, 46.35 PASS DP=46;MQ=72.25;MQRankSum=0.394;ReadPosRankSum=4.243;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,28,0:0.609,0.000:46:7,12,0:11,16,0:43:81,0,42,936,644,1580:255,0,255:17,0:4.6350e+01,2.3117e-04,4.5223e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,11,17:7,11,13,15 chr1 152190946 . T . PASS END=152190982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:95:45:0,95,1505:0,95,255:40,0 chr1 152190983 . T . PASS END=152191031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:43:0,87,1566:0,87,255:40,0 chr1 152191032 . C . PASS END=152191032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:68:54:0,68,1792:0,68,255:40,0 chr1 152191033 . A . PASS END=152191053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:85:53:0,85,1793:0,85,255:40,0 chr1 152191054 . A . PASS END=152191054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1868:0,71,255:40,0 chr1 152191055 . C . PASS END=152191064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,107,1733:0,107,255:40,0 chr1 152191065 . G . PASS END=152191065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1823:0,79,255:40,0 chr1 152191066 . T . PASS END=152191077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:50:0,98,1798:0,98,255:40,0 chr1 152191078 . A . PASS END=152191078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1664:0,67,255:40,0 chr1 152191079 . G . PASS END=152191082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:52:0,118,1800:0,118,255:40,0 chr1 152191083 . T . PASS END=152191083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:73:53:0,73,1820:0,73,255:40,0 chr1 152191084 . A . PASS END=152191170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:46:0,98,1659:0,98,255:40,1 chr1 152191171 . A . PASS END=152191171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1558:0,61,255:40,0 chr1 152191172 . C . PASS END=152191467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:81:29:0,81,1056:0,84,255:40,2 chr1 152191468 . G . PASS END=152191468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 152191469 . C . PASS END=152191469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152191470 . C . PASS END=152191470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 152191471 . C . PASS END=152191471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152191472 . G . PASS END=152191472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 152191473 . A . PASS END=152191474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 152191475 . G . PASS END=152191475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 152191476 . C . PASS END=152191476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 152191477 . G . PASS END=152191477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:27,0 chr1 152191478 . T . PASS END=152191483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:30,0 chr1 152191484 . G . PASS END=152191484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:29,0 chr1 152191485 . A . PASS END=152191485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:31,0 chr1 152191486 . G . PASS END=152191486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:29,0 chr1 152191487 . G . PASS END=152191487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:29,0 chr1 152191488 . C . PASS END=152191494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:29,0 chr1 152191495 . A . PASS END=152191495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 152191496 . T . PASS END=152191497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 152191498 . C . PASS END=152191498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 152191499 . T . PASS END=152191504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 152191505 . T . PASS END=152191517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:25:0,75,915:0,75,255:26,0 chr1 152191518 . G . PASS END=152191518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 152191519 . A . PASS END=152191522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 152191523 . G . PASS END=152191533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152191534 . A . PASS END=152191534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 152191535 . T . PASS END=152191541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 152191542 . C . PASS END=152191548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 152191549 . T . PASS END=152191549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:24,0 chr1 152191550 . G . PASS END=152191562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 152191563 . A . PASS END=152191564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 152191565 . G . PASS END=152191565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 152191566 . T . PASS END=152191573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:28,0 chr1 152191574 . T . PASS END=152191574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 152191575 . G . PASS END=152191585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 152191586 . C . PASS END=152191599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,1000:0,70,255:26,0 chr1 152191600 . T . PASS END=152191600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:23,0 chr1 152191601 . G . PASS END=152191604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr1 152191605 . C . PASS END=152191611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152191612 . A . PASS END=152191621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:26,0 chr1 152191622 . T . PASS END=152191625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 152191626 . C . PASS END=152191635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,909:0,67,255:26,0 chr1 152191636 . G . PASS END=152191642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 152191643 . T . PASS END=152191656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,881:0,64,255:26,0 chr1 152191657 . A . PASS END=152191657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,701:0,28,255:23,0 chr1 152191658 . C . PASS END=152191671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,925:0,67,255:26,0 chr1 152191672 . T . PASS END=152191681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:25,0 chr1 152191682 . T . PASS END=152191683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,754:0,42,255:22,0 chr1 152191684 . A . PASS END=152191685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152191686 . A . PASS END=152191686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 152191687 . A . PASS END=152191687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 152191688 . T . PASS END=152191688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 152191689 . G . PASS END=152191689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 152191690 . G . PASS END=152191690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,784:0,41,255:20,0 chr1 152191691 . C . PASS END=152191691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152191692 . C . PASS END=152191708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,751:0,47,255:19,0 chr1 152191709 . C G, 50.00 PASS DP=18;MQ=240.54;MQRankSum=0.906;ReadPosRankSum=2.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,11,0:0.611,0.000:18:7,5,0:0,6,0:48:85,0,48,365,250,615:255,0,253:7,0:5.0000e+01,7.6364e-05,5.1216e+01,3.6461e+02,2.8512e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,5,6:3,4,5,6 chr1 152191710 . T . PASS END=152191713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,613:0,40,255:17,0 chr1 152191714 . G . PASS END=152191714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 152191715 . C . PASS END=152191728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:16,0 chr1 152191729 . G . PASS END=152191729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 152191730 . C . PASS END=152191732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 152191733 . T . PASS END=152191734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 152191735 . G . PASS END=152191743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 152191744 . G . PASS END=152191745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 152191746 . G . PASS END=152191746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 152191747 . C . PASS END=152191829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,545:0,40,255:19,0 chr1 152191830 . A . PASS END=152191841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr1 152191842 . G . PASS END=152191863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,738:0,66,255:23,0 chr1 152191864 . A . PASS END=152191864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 152191865 . C . PASS END=152191878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 152191879 . G A, 50.00 PASS DP=25;MQ=210.09;MQRankSum=-2.746;ReadPosRankSum=2.066;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,16,0:0.640,0.000:25:4,7,0:5,9,0:37:85,0,34,556,264,821:255,0,229:9,0:5.0001e+01,9.4598e-04,3.6824e+01,4.5000e+02,2.9908e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,2,6,10:2,7,9,7 chr1 152191880 . T . PASS END=152191905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,65,255:24,0 chr1 152191906 . T . PASS END=152191906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 152191907 . G . PASS END=152191916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 152191917 . C . PASS END=152191925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:23,0 chr1 152191926 . T . PASS END=152191926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 152191927 . G . PASS END=152191932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:24,0 chr1 152191933 . G . PASS END=152191933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:21,0 chr1 152191934 . G . PASS END=152191934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152191935 . A . PASS END=152191935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 152191936 . G . PASS END=152191937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152191938 . A . PASS END=152191938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:22,0 chr1 152191939 . G . PASS END=152191956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,864:0,72,255:25,0 chr1 152191957 . A . PASS END=152191957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:20,0 chr1 152191958 . T . PASS END=152191983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 152191984 . T . PASS END=152191984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:24,0 chr1 152191985 . G . PASS END=152192021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,846:0,72,255:26,0 chr1 152192022 . A . PASS END=152192038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 152192039 . C . PASS END=152192039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 152192040 . C . PASS END=152192041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152192042 . T . PASS END=152192042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 152192043 . T . PASS END=152192043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 152192044 . G . PASS END=152192046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152192047 . T . PASS END=152192050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 152192051 . G . PASS END=152192051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152192052 . A . PASS END=152192055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1024:0,71,255:26,0 chr1 152192056 . A . PASS END=152192056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152192057 . C . PASS END=152192057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 152192058 . C . PASS END=152192058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152192059 . G . PASS END=152192059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,947:0,18,255:24,0 chr1 152192060 . G . PASS END=152192066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152192067 . A . PASS END=152192067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152192068 . C . PASS END=152192076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1216:0,83,255:30,0 chr1 152192077 . G . PASS END=152192078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:31,0 chr1 152192079 . C . PASS END=152192079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 152192080 . G . PASS END=152192081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1141:0,80,255:29,0 chr1 152192082 . A . PASS END=152192082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:30,0 chr1 152192083 . G . PASS END=152192088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:34,0 chr1 152192089 . A . PASS END=152192089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr1 152192090 . G . PASS END=152192097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1196:0,85,255:37,0 chr1 152192098 . A . LowGQ END=152192099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:0:38:0,0,1070:0,0,255:36,0 chr1 152192100 . A . PASS END=152192101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1405:0,117,255:39,0 chr1 152192102 . T . LowGQ END=152192102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:0:39:0,0,1039:71,0,255:33,0 chr1 152192103 . C . PASS END=152192103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:38,0 chr1 152192104 . G . PASS END=152192113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,107,1346:0,107,255:40,0 chr1 152192114 . C T, 44.43 PASS DP=41;MQ=160.33;MQRankSum=0.176;ReadPosRankSum=3.505;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,15,0:0.366,0.000:41:10,5,0:16,10,0:44:79,0,50,536,922,1458:255,0,255:28,0:4.4431e+01,1.7836e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,14,8,7:16,10,8,7 chr1 152192115 . G . PASS END=152192152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:83:43:0,83,1513:0,83,255:40,0 chr1 152192153 . T . PASS END=152192153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1605:0,64,255:40,0 chr1 152192154 . G . PASS END=152192162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,105,1686:0,105,255:40,0 chr1 152192163 . G T, 1.28 DRAGENSnpHardQUAL DP=45;MQ=135.01;MQRankSum=-3.489;ReadPosRankSum=0.785;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:39,6,0:0.133,0.000:45:14,3,0:25,3,0:6:30,0,50,186,1393,1579:135,0,255:32,0:1.2794e+00,5.9319e+00,5.8932e+01,1.9166e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,21,2,4:15,24,3,3 chr1 152192164 . A . PASS END=152192218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,100,1660:0,100,255:40,0 chr1 152192219 . G C, 0.08 DRAGENSnpHardQUAL DP=64;MQ=107.38;MQRankSum=-2.775;ReadPosRankSum=1.232;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:58,6,0:0.094,0.000:64:26,3,0:32,3,0:17:17,0,50,214,2026,2241:67,0,255:40,0:8.0240e-02,1.7374e+01,7.0324e+01,2.3186e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,33,2,4:23,35,3,3 chr1 152192220 . T . PASS END=152192292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:94:53:0,94,1800:0,94,255:40,0 chr1 152192293 . C T, 44.03 PASS DP=52;MQ=94.06;MQRankSum=-4.551;ReadPosRankSum=2.579;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,23,0:0.442,0.000:52:12,8,0:17,15,0:43:79,0,48,783,992,1776:255,0,255:27,0:4.4026e+01,2.0399e-04,5.1300e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,8,15:15,14,11,12 chr1 152192294 . G . PASS END=152192330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,107,1800:0,107,255:40,0 chr1 152192331 . C . PASS END=152192425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:36:0,93,1357:0,93,255:40,0 chr1 152192426 . G . PASS END=152192426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:31,0 chr1 152192427 . G . PASS END=152192429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1308:0,92,255:32,0 chr1 152192430 . C . PASS END=152192430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 152192431 . A . PASS END=152192458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:33:0,80,1194:0,80,255:34,0 chr1 152192459 . T . PASS END=152192459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:30,0 chr1 152192460 . C . PASS END=152192486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1140:0,82,255:31,0 chr1 152192487 . A . PASS END=152192487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 152192488 . C . PASS END=152192488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 152192489 . T . PASS END=152192489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 152192490 . G . PASS END=152192491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 152192492 . C . PASS END=152192517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,921:0,62,255:26,0 chr1 152192518 . T . PASS END=152192538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:26,0 chr1 152192539 . A . PASS END=152192539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 152192540 . G . PASS END=152192554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,872:0,64,255:26,0 chr1 152192555 . T C, 49.52 PASS DP=27;MQ=178.01;MQRankSum=-1.237;ReadPosRankSum=0.024;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,13,0:0.481,0.000:27:5,6,0:9,7,0:48:84,0,50,457,501,958:255,0,255:14,0:4.9521e+01,7.0152e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,3,10:9,5,6,7 chr1 152192556 . A . PASS END=152192556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152192557 . G . PASS END=152192562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152192563 . A . PASS END=152192563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 152192564 . G . PASS END=152192565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152192566 . T . PASS END=152192568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 152192569 . A . PASS END=152192571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152192572 . T . PASS END=152192572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152192573 . G . PASS END=152192574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152192575 . A . PASS END=152192582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,1072:0,76,255:26,0 chr1 152192583 . C . PASS END=152192583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152192584 . T . PASS END=152192630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:24:0,65,906:0,65,255:26,0 chr1 152192631 . C T, 48.67 PASS DP=24;MQ=197.97;MQRankSum=1.435;ReadPosRankSum=-1.142;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,10,0:0.417,0.000:24:7,6,0:7,4,0:47:83,0,50,358,472,829:255,0,255:14,0:4.8670e+01,8.0765e-05,5.3000e+01,3.5762e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,6,4:6,8,6,4 chr1 152192632 . G . PASS END=152192646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,886:0,72,255:25,0 chr1 152192647 . A . PASS END=152192647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:22,0 chr1 152192648 . C . PASS END=152192648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152192649 . C . PASS END=152192649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 152192650 . T . PASS END=152192653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152192654 . C . PASS END=152192654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 152192655 . C . PASS END=152192655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 152192656 . A . PASS END=152192656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 152192657 . G . PASS END=152192660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,907:0,75,255:25,0 chr1 152192661 . C . PASS END=152192661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 152192662 . A . PASS END=152192676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:26:0,63,939:0,64,255:26,0 chr1 152192677 . A . PASS END=152192686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:22:0,54,810:0,59,255:18,0 chr1 152192687 . T C, 112.75 PASS DP=22;MQ=226.76;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,11,0:0,11,0:63:151,66,0,811,66,811:255,66,0:0,0:1.1275e+02,6.2749e+01,2.3297e-06,4.5000e+02,9.7519e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,9:0,0,12,10 chr1 152192688 . C . PASS END=152192695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 152192696 . G . PASS END=152192707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:22,0 chr1 152192708 . C . PASS END=152192708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:21,0 chr1 152192709 . C . PASS END=152192724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 152192725 . G . PASS END=152192738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 152192739 . C . PASS END=152192741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 152192742 . A . PASS END=152192742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 152192743 . T . PASS END=152192746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 152192747 . C . PASS END=152192774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:26,0 chr1 152192775 . T . PASS END=152192777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 152192778 . C . PASS END=152192787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr1 152192788 . G . PASS END=152192816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,931:0,72,255:25,0 chr1 152192817 . C . PASS END=152192817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 152192818 . A . PASS END=152192824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,962:0,78,255:26,0 chr1 152192825 . C T, 50.00 PASS DP=25;MQ=245.21;MQRankSum=1.768;ReadPosRankSum=1.985;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,13,0:0.520,0.000:25:3,6,0:9,7,0:48:85,0,50,465,429,894:255,0,255:12,0:5.0000e+01,6.5751e-05,5.2915e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,4,9:4,8,7,6 chr1 152192826 . C . PASS END=152192862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 152192863 . G . PASS END=152192876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:24,0 chr1 152192877 . A . PASS END=152192877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 152192878 . G . PASS END=152192888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 152192889 . C . PASS END=152192889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 152192890 . A . PASS END=152192890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 152192891 . G . PASS END=152192894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 152192895 . C . PASS END=152192895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 152192896 . A . PASS END=152192896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152192897 . T . PASS END=152192897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:27,0 chr1 152192898 . G . PASS END=152192915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:29,0 chr1 152192916 . A . PASS END=152192916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 152192917 . C . PASS END=152192920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152192921 . C . PASS END=152192926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 152192927 . C . PASS END=152192940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:30,0 chr1 152192941 . G . PASS END=152192948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 152192949 . T . PASS END=152192949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 152192950 . T . PASS END=152192950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152192951 . G . PASS END=152192974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 152192975 . T . PASS END=152192975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 152192976 . G . PASS END=152192977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 152192978 . T C, 116.22 PASS DP=23;MQ=209.57;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,14,0:0,9,0:66:154,69,0,889,69,889:255,69,0:0,0:1.1622e+02,6.6223e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,12:0,0,12,11 chr1 152192979 . G . PASS END=152192983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 152192984 . T . PASS END=152193011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,50,255:19,0 chr1 152193012 . C . PASS END=152193012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 152193013 . A . PASS END=152193016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 152193017 . T . PASS END=152193017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 152193018 . T . PASS END=152193020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 152193021 . T . PASS END=152193021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:16,0 chr1 152193022 . A . PASS END=152193030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 152193031 . G . PASS END=152193036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:25,0 chr1 152193037 . T . PASS END=152193037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr1 152193038 . C . PASS END=152193043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,901:0,72,255:25,0 chr1 152193044 . C . PASS END=152193044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 152193045 . C . PASS END=152193049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 152193050 . T . PASS END=152193051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 152193052 . A G, 119.23 PASS DP=24;MQ=222.35;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,10,0:0,14,0:69:157,72,0,923,72,923:255,75,0:0,0:1.1923e+02,6.9230e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,8:0,0,6,18 chr1 152193053 . T . PASS END=152193053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152193054 . G . PASS END=152193054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 152193055 . T . PASS END=152193061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,923:0,62,255:25,0 chr1 152193062 . A . PASS END=152193062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 152193063 . A . PASS END=152193063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:27,0 chr1 152193064 . G . PASS END=152193071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,926:0,84,255:29,0 chr1 152193072 . T . PASS END=152193072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,915:0,54,255:26,0 chr1 152193073 . C . PASS END=152193074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152193075 . G . PASS END=152193075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 152193076 . G . PASS END=152193078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152193079 . T . PASS END=152193080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1047:0,60,255:28,0 chr1 152193081 . A . PASS END=152193081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 152193082 . G . PASS END=152193089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1109:0,90,255:30,0 chr1 152193090 . C . PASS END=152193090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 152193091 . A . PASS END=152193098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 152193099 . C . PASS END=152193099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 152193100 . A . PASS END=152193101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1109:0,90,255:30,0 chr1 152193102 . G . PASS END=152193102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 152193103 . G . PASS END=152193115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:37,0 chr1 152193116 . C . PASS END=152193116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 152193117 . T . PASS END=152193120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1351:0,83,255:40,0 chr1 152193121 . G T, 48.26 PASS DP=42;MQ=225.73;MQRankSum=2.859;ReadPosRankSum=2.605;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,18,0:0.429,0.000:42:9,8,0:15,10,0:47:83,0,50,644,850,1494:255,0,255:24,0:4.8261e+01,8.6460e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,6,9,9:9,15,7,11 chr1 152193122 . C . PASS END=152193131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:43:0,96,1530:0,96,255:40,0 chr1 152193132 . G . PASS END=152193132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1558:0,58,255:40,0 chr1 152193133 . T . PASS END=152193133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:18:45:0,18,1368:0,18,255:39,0 chr1 152193134 . T . PASS END=152193158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:39:0,84,1348:0,84,255:40,0 chr1 152193159 . A . PASS END=152193245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,99,1366:0,99,255:40,0 chr1 152193246 . C . PASS END=152193285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,108,1620:0,119,255:40,0 chr1 152193286 . G T, 42.16 PASS DP=45;MQ=161.83;MQRankSum=-0.945;ReadPosRankSum=4.649;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,14,0:0.318,0.000:44:14,3,0:16,11,0:42:77,0,47,177,177,177:255,0,255:29,0:4.2164e+01,3.0728e-04,5.0000e+01,1.7693e+02,2.1170e+02,1.7994e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,15,4,10:17,13,9,5:152193286 chr1 152193287 . T . PASS END=152193290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 152193291 . G T, 42.16 PASS DP=45;MQ=161.83;MQRankSum=-0.945;ReadPosRankSum=4.019;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,14,0:0.318,0.000:44:14,3,0:16,11,0:42:77,0,47,177,177,177:255,0,255:29,0:4.2164e+01,3.0728e-04,5.0000e+01,1.7693e+02,2.1170e+02,1.7994e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,15,4,10:17,13,9,5:152193286 chr1 152193292 . T . PASS END=152193331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,116,1606:0,116,255:40,0 chr1 152193332 . C . PASS END=152193502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:97:38:0,97,1234:0,97,255:40,0 chr1 152193503 . T . PASS END=152193525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,96,255:34,0 chr1 152193526 . G . PASS END=152193526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 152193527 . C . PASS END=152193543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1186:0,86,255:33,0 chr1 152193544 . A G, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.863;ReadPosRankSum=4.357;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:15,18,0:0.545,0.000:33:7,6,0:8,12,0:47:85,0,46,185,185,185:255,0,255:15,0:5.0000e+01,9.2673e-05,4.9448e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,6,8,10:7,8,10,8:152193544 chr1 152193545 . T . PASS END=152193546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:33,0 chr1 152193547 . G A, 571.91 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,33,0:1.000,0.000:33:0,13,0:0,20,0:450:610,525,0,710,710,710:255,99,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,16:0,0,17,16:152193544 chr1 152193548 . G . PASS END=152193588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1221:0,86,255:38,0 chr1 152193589 . G . PASS END=152193813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,102,1509:0,102,255:40,0 chr1 152193814 . T . PASS END=152193850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,134,255:40,0 chr1 152193851 . C T, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.105;ReadPosRankSum=2.784;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,27,0:0.529,0.000:51:10,15,0:14,12,0:48:85,0,50,929,847,1776:255,0,255:23,0:5.0000e+01,6.6527e-05,5.2745e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,13,14:14,10,13,14 chr1 152193852 . G . PASS END=152193888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,146,255:40,0 chr1 152193889 . A . PASS END=152193952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,103,1395:0,103,255:40,0 chr1 152193953 . G . PASS END=152193955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,101,1449:0,101,255:37,0 chr1 152193956 . T . PASS END=152193956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:35,0 chr1 152193957 . C . PASS END=152193966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:38:0,90,1372:0,90,255:38,0 chr1 152195592 . C . PASS END=152195616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1338:0,103,255:40,0 chr1 152195617 . T . PASS END=152195678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:42:0,93,1405:0,93,255:40,0 chr1 152195679 . T . PASS END=152195698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:47:0,81,1215:0,106,255:40,0 chr1 152195699 . C . PASS END=152195706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:60:44:0,60,900:0,102,255:26,0 chr1 152195707 . A . PASS END=152195707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:54:44:0,54,810:0,132,255:18,0 chr1 152195708 . C . PASS END=152195709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:33:43:0,33,495:0,129,255:12,0 chr1 152195710 . C . PASS END=152195713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:24:38:0,24,360:0,110,255:8,0 chr1 152195714 . G . PASS END=152195726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:12:32:0,12,180:0,75,255:6,0 chr1 152195727 . C . PASS END=152195727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:9:32:0,9,135:0,96,255:3,0 chr1 152195728 . AT A, 87.55 PASS DP=33;MQ=249.85;MQRankSum=2.765;ReadPosRankSum=-0.207;FractionInformativeReads=0.909;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:3,27,0:0.900,0.000:30:3,13,0:0,14,0:38:104,41,0,204,204,204:255,0,90:3,36:8.7548e+01,3.7548e+01,7.6396e-04,2.2232e+02,2.3532e+02,2.2533e+02:0.00,13.00,16.01,34.77,47.77,37.78:1,2,11,16:1,2,13,14 chr1 152195729 . T . LowGQ END=152195729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,36:40:0:40:0,0,0:255,0,27:3,36 chr1 152275176 . T . PASS END=152276111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:91:38:0,91,1357:0,91,255:40,0 chr1 152276112 . C . PASS END=152276148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:86:0,120,1800:0,248,255:40,0 chr1 152276149 . C T, 49.25 PASS DP=89;MQ=159.85;MQRankSum=-3.366;ReadPosRankSum=5.116;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,47,0:0.528,0.000:89:14,24,0:28,23,0:48:84,0,50,1624,1429,3052:255,0,255:40,0:4.9250e+01,7.4811e-05,5.2717e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,24,19,28:28,14,24,23 chr1 152276150 . G . PASS END=152276186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:81:0,120,1800:0,214,255:40,0 chr1 152276187 . T . PASS END=152276281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:43:0,93,1530:0,93,255:40,0 chr1 152276282 . C . PASS END=152276282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1443:0,52,255:39,0 chr1 152276283 . T . PASS END=152276339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:39:0,96,1485:0,96,255:40,0 chr1 152276340 . T . PASS END=152276376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,136,255:40,0 chr1 152276377 . C G, 1.40 DRAGENSnpHardQUAL DP=66;MQ=35.03;MQRankSum=-0.758;ReadPosRankSum=1.354;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:53,13,0:0.197,0.000:66:30,5,0:23,8,0:6:31,0,42,465,1878,2343:255,0,255:40,0:1.3968e+00,5.6063e+00,5.0856e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,20,12,1:26,27,4,9 chr1 152276378 . T . PASS END=152276458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:67:0,120,1800:0,173,255:40,0 chr1 152276459 . C T, 6.95 DRAGENSnpHardQUAL DP=104;MQ=37.81;MQRankSum=-1.177;ReadPosRankSum=2.372;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:80,24,0:0.231,0.000:104:43,12,0:37,12,0:7:41,0,44,858,2796,3654:255,0,255:40,0:6.9456e+00,9.8029e-01,4.8105e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:48,32,9,15:47,33,13,11 chr1 152276460 . T . PASS END=152276496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:104:0,120,1800:0,255,255:40,0 chr1 152276497 . G . PASS END=152276545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,2:94:99:76:0,120,1800:0,185,255:40,0 chr1 152276546 . A . PASS END=152276582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,136,255:40,0 chr1 152276583 . C G, 0.27 DRAGENSnpHardQUAL DP=62;MQ=70.55;MQRankSum=-3.780;ReadPosRankSum=0.679;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:52,10,0:0.161,0.000:62:32,6,0:20,4,0:12:23,0,47,342,1730,2071:179,0,255:40,0:2.6682e-01,1.2248e+01,6.2648e+01,3.5377e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,37,3,7:25,27,5,5:152276583 chr1 152276584 . T . PASS END=152276597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,178,255:40,0 chr1 152276598 . G A, 0.01 DRAGENSnpHardQUAL DP=59;MQ=78.45;MQRankSum=-4.778;ReadPosRankSum=-0.374;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:49,10,0:0.169,0.000:59:27,7,0:22,3,0:25:9,0,47,321,1744,2065:180,0,255:40,0:1.2701e-02,2.5346e+01,7.5746e+01,3.4593e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,32,2,8:21,28,5,5:152276583 chr1 152276599 . T . PASS END=152276625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:54:0,97,1800:0,97,255:40,0 chr1 152276626 . G C, 1.96 DRAGENSnpHardQUAL DP=59;MQ=80.71;MQRankSum=-4.642;ReadPosRankSum=-1.586;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:48,11,0:0.186,0.000:59:25,6,0:23,5,0:4:32,0,47,332,1716,2048:227,0,255:40,0:1.9593e+00,4.3997e+00,5.4800e+01,3.3604e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,32,5,6:25,23,4,7 chr1 152276627 . T . LowGQ END=152276628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:0:59:0,0,1771:17,0,255:40,0 chr1 152276629 . G . PASS END=152276658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,166,255:40,0 chr1 152276659 . T C, 0.06 DRAGENSnpHardQUAL DP=63;MQ=86.43;MQRankSum=-2.092;ReadPosRankSum=-0.069;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:54,9,0:0.143,0.000:63:29,4,0:25,5,0:18:16,0,44,144,144,144:160,0,255:40,0:6.2283e-02,1.8465e+01,6.5865e+01,1.6285e+02,1.9762e+02,1.6587e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,35,9,0:24,30,4,5:152276659 chr1 152276660 . G C, 0.68 DRAGENSnpHardQUAL DP=63;MQ=86.43;MQRankSum=-2.198;ReadPosRankSum=0.180;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:53,9,0:0.145,0.000:62:29,4,0:24,5,0:8:27,0,44,144,144,144:176,0,255:40,0:6.7582e-01,8.4131e+00,5.5813e+01,1.5280e+02,1.8757e+02,1.5581e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,34,9,0:23,30,4,5:152276659 chr1 152276661 . A . PASS END=152276670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,168,255:40,0 chr1 152276671 . C T, 1.95 DRAGENSnpHardQUAL DP=59;MQ=92.18;MQRankSum=-2.477;ReadPosRankSum=-1.465;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:50,9,0:0.153,0.000:59:26,4,0:24,5,0:4:32,0,48,319,1759,2078:171,0,255:40,0:1.9489e+00,4.4181e+00,5.5268e+01,3.2380e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,30,6,3:24,26,5,4:152276659 chr1 152276672 . G . PASS END=152276698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,164,255:40,0 chr1 152276699 . A . LowGQ END=152276699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,7:63:0:63:0,0,1885:30,0,255:40,0 chr1 152276700 . C . PASS END=152276710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,173,255:40,0 chr1 152276711 . C . PASS END=152276734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,161,255:40,0 chr1 152276735 . T . PASS END=152276771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:46:0,86,1566:0,86,255:40,0 chr1 152276772 . C A, 50.00 PASS DP=49;MQ=169.32;MQRankSum=-0.470;ReadPosRankSum=3.110;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:14,13,0:10,12,0:48:85,0,50,886,850,1736:255,0,255:21,0:5.0000e+01,6.5492e-05,5.2962e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,15,16,9:9,15,14,11 chr1 152276773 . C . PASS END=152276776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 152276777 . G . PASS END=152276777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1682:0,67,255:40,0 chr1 152276778 . C . PASS END=152276809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,105,1678:0,105,255:40,0 chr1 152276810 . G . PASS END=152276833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,153,255:40,0 chr1 152276834 . A . PASS END=152276870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,132,255:40,0 chr1 152276871 . A G, 50.00 PASS DP=58;MQ=185.74;MQRankSum=-3.187;ReadPosRankSum=3.549;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,33,0:0.569,0.000:58:16,18,0:9,15,0:48:85,0,48,1180,878,2059:255,0,255:23,0:5.0000e+01,7.5329e-05,5.1343e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,10,19,14:14,11,14,19:152276871 chr1 152276872 . T . PASS END=152276888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,174,255:40,0 chr1 152276889 . A G, 50.00 PASS DP=60;MQ=177.54;MQRankSum=-2.708;ReadPosRankSum=4.886;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:26,34,0:0.567,0.000:60:17,17,0:9,17,0:48:85,0,48,1216,930,2146:255,0,255:25,0:5.0000e+01,7.4552e-05,5.1451e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,20,14:14,12,19,15:152276871 chr1 152276890 . T . PASS END=152276926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,157,255:40,0 chr1 152276927 . G . PASS END=152277017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,159,255:40,2 chr1 152277018 . G . PASS END=152277054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,158,255:40,0 chr1 152277055 . C G, 46.58 PASS DP=78;MQ=96.39;MQRankSum=-2.314;ReadPosRankSum=4.643;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,38,0:0.487,0.000:78:16,21,0:24,17,0:45:81,0,48,1306,1422,2729:255,0,255:39,0:4.6584e+01,1.3098e-04,5.0850e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,21,21,17:21,19,14,24 chr1 152277056 . C . PASS END=152277092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,202,255:40,0 chr1 152277093 . C . PASS END=152277130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,191,255:40,0 chr1 152277131 . G . PASS END=152277167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,175,255:40,0 chr1 152277168 . A G, 44.53 PASS DP=69;MQ=78.00;MQRankSum=-1.996;ReadPosRankSum=4.071;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,31,0:0.449,0.000:69:20,16,0:18,15,0:43:79,0,46,1051,1258,2309:255,0,255:35,0:4.4535e+01,2.0813e-04,4.8950e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,18,15,16:20,18,14,17 chr1 152277169 . G . PASS END=152277205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:72:0,120,1800:0,183,255:40,0 chr1 152277206 . A . PASS END=152277307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,184,255:40,0 chr1 152277308 . T . PASS END=152277344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,134,255:40,0 chr1 152277345 . C T, 47.10 PASS DP=58;MQ=104.82;MQRankSum=1.524;ReadPosRankSum=2.992;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,34,0:0.586,0.000:58:8,13,0:16,21,0:44:82,0,45,1064,858,1922:255,0,255:24,0:4.7100e+01,1.6101e-04,4.7546e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,17,18,16:15,9,19,15 chr1 152277346 . T . PASS END=152277395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,147,255:40,0 chr1 152277396 . T C, 47.40 PASS DP=57;MQ=118.61;MQRankSum=0.473;ReadPosRankSum=4.302;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,31,0:0.544,0.000:57:10,14,0:16,17,0:46:82,0,47,1072,881,1953:255,0,255:22,0:4.7400e+01,1.2089e-04,5.0146e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,8,17,14:14,12,16,15 chr1 152277397 . T . PASS END=152277433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,142,255:40,0 chr1 152277434 . C . PASS END=152277679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,147,255:40,0 chr1 152277680 . A . PASS END=152277716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,102,1530:0,118,255:40,0 chr1 152277717 . C A, 35.15 PASS DP=47;MQ=85.13;MQRankSum=-2.179;ReadPosRankSum=3.001;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,15,0:0.319,0.000:47:15,3,0:17,12,0:35:70,0,47,536,1107,1644:255,0,255:22,0:3.5148e+01,1.3691e-03,5.0201e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,19,5,10:18,14,7,8 chr1 152277718 . A . PASS END=152277753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,93,255:35,0 chr1 152277754 . T . PASS END=152277754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:29,0 chr1 152277755 . C . PASS END=152277759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 152277760 . T . PASS END=152277782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:25,0 chr1 152277783 . T . PASS END=152277821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,917:0,65,255:25,0 chr1 152277822 . T C, 0.70 DRAGENSnpHardQUAL DP=26;MQ=68.19;MQRankSum=-2.736;ReadPosRankSum=3.091;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:22,4,0:0.154,0.000:26:10,0,0:12,4,0:8:27,0,42,142,142,142:55,0,255:21,0:7.0182e-01,8.2619e+00,5.3712e+01,1.5070e+02,1.8547e+02,1.5371e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,10,0,4:12,10,4,0:152277822 chr1 152277823 . G . PASS END=152277825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 152277826 . A C, 0.70 DRAGENSnpHardQUAL DP=26;MQ=68.19;MQRankSum=-2.736;ReadPosRankSum=2.096;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:22,4,0:0.154,0.000:26:10,0,0:12,4,0:8:27,0,42,142,142,142:77,0,255:21,0:7.0182e-01,8.2619e+00,5.3712e+01,1.5070e+02,1.8547e+02,1.5371e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,10,0,4:12,10,4,0:152277822 chr1 152277827 . C . PASS END=152277832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 152277833 . G . PASS END=152277833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 152277834 . C . PASS END=152277839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152277840 . G . PASS END=152277840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152277841 . C . PASS END=152277844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 152277845 . C . PASS END=152277851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 152277852 . T . PASS END=152277852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 152277853 . T . PASS END=152277866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1169:0,80,255:30,0 chr1 152277867 . T . PASS END=152277881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 152277882 . A . PASS END=152277883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 152277884 . T . PASS END=152277884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:27,0 chr1 152277885 . T . PASS END=152277890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152277891 . T . PASS END=152277891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 152277892 . C . PASS END=152277918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:31,0 chr1 152277919 . C . PASS END=152277920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:67:28:0,67,955:0,67,255:26,0 chr1 152277921 . T . PASS END=152277952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1217:0,86,255:34,0 chr1 152277953 . C . PASS END=152277953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 152277954 . T . PASS END=152278023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:34,0 chr1 152278024 . T . PASS END=152278024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,922:0,38,255:31,0 chr1 152278025 . G . PASS END=152278036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1299:0,108,255:37,0 chr1 152278037 . T . PASS END=152278037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:34,0 chr1 152278038 . G . PASS END=152278043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:37:0,98,1380:0,98,255:37,0 chr1 152278044 . A . PASS END=152278044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:33,0 chr1 152278045 . C . PASS END=152278046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 152278047 . G . PASS END=152278047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1365:0,43,255:34,0 chr1 152278048 . T . PASS END=152278048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 152278049 . A . PASS END=152278049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1321:0,43,255:34,0 chr1 152278050 . T . PASS END=152278074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:34:0,86,1194:0,86,255:38,0 chr1 152278075 . T . PASS END=152278075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:30,0 chr1 152278076 . C . PASS END=152278082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 152278083 . C . PASS END=152278083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 152278084 . T . PASS END=152278094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 152278095 . G . PASS END=152278095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:25,0 chr1 152278096 . G . PASS END=152278101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 152278102 . T . PASS END=152278102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:26,0 chr1 152278103 . G . PASS END=152278103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152278104 . T . PASS END=152278104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 152278105 . C . PASS END=152278106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 152278107 . T . PASS END=152278136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,786:0,66,255:25,0 chr1 152278137 . G . PASS END=152278148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:19,0 chr1 152278149 . C . PASS END=152278150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:18:0,39,585:0,54,255:13,0 chr1 152278151 . G . PASS END=152278151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:13,0 chr1 152278152 . T . PASS END=152278175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,40,255:13,0 chr1 152278176 . G . PASS END=152278188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 152278189 . T . PASS END=152278189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:14,0 chr1 152278190 . G . PASS END=152278199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 152278200 . T . PASS END=152278205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 152278206 . T . PASS END=152278206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:12,0 chr1 152278207 . G . PASS END=152278207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152278208 . A . PASS END=152278208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 152278209 . C . PASS END=152278211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 152278212 . G . PASS END=152278212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 152278213 . C . PASS END=152278214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 152278215 . A . PASS END=152278215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 152278216 . C . PASS END=152278219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 152278220 . C . PASS END=152278221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 152278222 . G . PASS END=152278222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152278223 . A . PASS END=152278224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 152278225 . T . PASS END=152278225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 152278226 . C . PASS END=152278226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 152278227 . T . PASS END=152278233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 152278234 . C . PASS END=152278234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 152278235 . T . PASS END=152278248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 152278249 . C . PASS END=152278249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 152278250 . C . PASS END=152278253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 152278254 . C . PASS END=152278256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152278257 . T . PASS END=152278259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 152278260 . G . PASS END=152278261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 152278262 . G . PASS END=152278262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 152278263 . G . PASS END=152278263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 152278264 . G . PASS END=152278266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 152278267 . G . PASS END=152278270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 152278271 . C . LowGQ END=152278271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:3,0,255:5,0 chr1 152278272 . T . PASS END=152278272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 152278273 . G . PASS END=152278273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:6,0 chr1 152278274 . A . PASS END=152278274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 152278275 . C . LowGQ END=152278275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,294:9,0,255:8,0 chr1 152278276 . T . PASS END=152278283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 152278284 . T . PASS END=152278284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 152278285 . G . PASS END=152278285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 152278286 . A . LowGQ END=152278286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 152278287 . G . PASS END=152278294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr1 152278295 . A . PASS END=152278295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 152278296 . A . PASS END=152278300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 152278301 . C . PASS END=152278301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 152278302 . C . PASS END=152278308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 152278309 . T . PASS END=152278309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 152278310 . C . PASS END=152278310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 152278311 . A . PASS END=152278311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:8,0 chr1 152278312 . C . PASS END=152278320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,288:0,27,255:9,0 chr1 152278321 . C . PASS END=152278321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 152278322 . T . PASS END=152278331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 152278332 . C . PASS END=152278332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:8,0 chr1 152278333 . C . PASS END=152278335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr1 152278336 . C . PASS END=152278362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,335:0,30,255:13,0 chr1 152278363 . G . PASS END=152278363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 152278364 . A . PASS END=152278365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152278366 . G . PASS END=152278366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 152278367 . C . PASS END=152278367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152278368 . T . PASS END=152278368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,396:0,12,255:13,0 chr1 152278369 . T . PASS END=152278369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 152278370 . G . PASS END=152278374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,472:0,39,255:13,0 chr1 152278375 . T . PASS END=152278379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 152278380 . A . PASS END=152278380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 152278381 . A . PASS END=152278382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 152278383 . G . PASS END=152278384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:14,0 chr1 152278385 . C . PASS END=152278456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,527:0,40,255:19,0 chr1 152278457 . G . PASS END=152278458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152278459 . T . PASS END=152278463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152278464 . G . PASS END=152278465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 152278466 . A . PASS END=152278467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152278468 . G . PASS END=152278476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 152278477 . T . PASS END=152278477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:19,0 chr1 152278478 . G . PASS END=152278482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152278483 . C . PASS END=152278485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 152278486 . G . PASS END=152278495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:23,0 chr1 152278496 . G . PASS END=152278496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 152278497 . T . PASS END=152278499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:27,0 chr1 152278500 . G . PASS END=152278500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152278501 . T . PASS END=152278501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 152278502 . G . PASS END=152278514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152278515 . T . PASS END=152278516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152278517 . G . PASS END=152278517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152278518 . T . PASS END=152278525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 152278526 . T . PASS END=152278526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 152278527 . G . PASS END=152278554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:33:0,93,1395:0,99,255:40,0 chr1 152278555 . T C, 18.73 PASS DP=44;MQ=52.22;MQRankSum=-0.705;ReadPosRankSum=1.138;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,11,0:0.250,0.000:44:11,4,0:22,7,0:19:53,0,44,365,1178,1543:242,0,255:33,0:1.8734e+01,5.8608e-02,4.7309e+01,3.6460e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,7,7,4:16,17,4,7 chr1 152278556 . C . PASS END=152278592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,118,1487:0,118,255:40,0 chr1 152278593 . T . PASS END=152278651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:68:0,120,1800:0,179,255:40,0 chr1 152278652 . A . PASS END=152278688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:83:0,120,1800:0,134,255:40,0 chr1 152278689 . C A, 45.85 PASS DP=102;MQ=64.99;MQRankSum=-2.802;ReadPosRankSum=1.857;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,70,0:0.686,0.000:102:11,41,0:21,29,0:37:81,0,35,2424,1136,3560:255,0,255:28,0:4.5851e+01,8.2610e-04,3.7846e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,15,47,23:20,12,40,30 chr1 152278690 . A . PASS END=152278726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:101:0,120,1800:0,255,255:40,0 chr1 152278727 . C . PASS END=152278770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:85:100:0,85,1800:0,85,255:40,0 chr1 152278771 . T . PASS END=152278771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,8:122:78:122:0,78,3875:0,78,255:40,0 chr1 152278772 . G . PASS END=152278776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,0:127:99:123:0,99,1800:0,99,255:40,0 chr1 152278777 . G . PASS END=152278813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:143,0:143:99:130:0,120,1800:0,150,255:40,0 chr1 152278814 . C T, 10.22 DRAGENSnpHardQUAL DP=145;MQ=59.64;MQRankSum=-6.349;ReadPosRankSum=1.255;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:117,28,0:0.193,0.000:145:71,13,0:46,15,0:10:45,0,43,145,145,145:255,0,255:40,0:1.0223e+01,4.3357e-01,4.6384e+01,1.4499e+02,1.7976e+02,1.4800e+02:0.00,34.77,37.78,34.77,69.54,37.78:63,54,13,15:67,50,18,10 chr1 152278815 . G . PASS END=152278855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:143,1:144:99:130:0,120,1800:0,255,255:40,0 chr1 152278856 . T G, 32.91 PASS DP=126;MQ=57.16;MQRankSum=1.425;ReadPosRankSum=1.990;FractionInformativeReads=0.992;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:86,39,0:0.312,0.000:125:52,22,0:34,17,0:33:68,0,46,1365,2985,4350:255,0,255:40,0:3.2906e+01,2.2804e-03,4.8952e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:43,43,22,17:43,43,23,16 chr1 152278857 . T . PASS END=152278893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,0:129:99:124:0,120,1800:0,255,255:40,0 chr1 152278894 . C . PASS END=152278981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,1:119:99:110:0,120,1800:0,255,255:40,0 chr1 152278982 . T . PASS END=152279018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,0:127:99:121:0,120,1800:0,199,255:40,0 chr1 152279019 . G A, 14.57 PASS DP=129;MQ=29.79;MQRankSum=1.949;ReadPosRankSum=4.781;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:100,29,0:0.225,0.000:129:43,14,0:57,15,0:15:49,0,39,951,3482,4432:255,0,255:40,0:1.4574e+01,1.5445e-01,4.2488e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:49,51,12,17:56,44,13,16 chr1 152279020 . T . PASS END=152279056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:88:0,120,1800:0,231,255:40,0 chr1 152279057 . G . PASS END=152279144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:81:31:0,81,1202:0,83,255:40,0 chr1 152279145 . G . PASS END=152279145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152279146 . A . PASS END=152279146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152279147 . G . PASS END=152279148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 152279149 . A . PASS END=152279160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1200:0,83,255:31,0 chr1 152279161 . T . PASS END=152279161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:26,0 chr1 152279162 . G . PASS END=152279162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 152279163 . T . PASS END=152279163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:27,0 chr1 152279164 . C . PASS END=152279177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 152279178 . T . PASS END=152279178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 152279179 . G . PASS END=152279186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1064:0,84,255:30,0 chr1 152279187 . A . PASS END=152279215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 152279216 . G . PASS END=152279223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 152279224 . G . PASS END=152279225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152279226 . C . PASS END=152279235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:18,0 chr1 152279236 . G . PASS END=152279239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 152279240 . A . PASS END=152279254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 152279255 . C . PASS END=152279255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 152279256 . T . PASS END=152279256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:14,0 chr1 152279257 . G . PASS END=152279268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 152279269 . T . PASS END=152279269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 152279270 . G . PASS END=152279270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 152279271 . T . PASS END=152279272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 152279273 . C . PASS END=152279287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 152279288 . C . PASS END=152279304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,35,255:13,0 chr1 152279305 . C . PASS END=152279305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 152279306 . C . PASS END=152279308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 152279309 . G . PASS END=152279314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 152279315 . C . PASS END=152279318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152279319 . G . PASS END=152279319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 152279320 . T . PASS END=152279320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,480:0,1,255:13,0 chr1 152279321 . C . PASS END=152279321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 152279322 . T . PASS END=152279335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 152279336 . A . PASS END=152279336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152279337 . A . PASS END=152279337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr1 152279338 . G . PASS END=152279346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152279347 . T . PASS END=152279357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 152279358 . T . PASS END=152279368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152279369 . A . PASS END=152279370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 152279371 . C . PASS END=152279371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 152279372 . T . PASS END=152279372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 152279373 . G . PASS END=152279376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 152279377 . G . PASS END=152279377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 152279378 . C . PASS END=152279378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152279379 . T . PASS END=152279379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 152279380 . G . PASS END=152279381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152279382 . C . PASS END=152279390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,498:0,31,255:13,0 chr1 152279391 . G . PASS END=152279392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 152279393 . G . PASS END=152279394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:3:14:0,3,457:0,3,255:11,0 chr1 152279395 . G . PASS END=152279395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 152279396 . A . PASS END=152279396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:12,0 chr1 152279397 . T . PASS END=152279397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152279398 . C . PASS END=152279398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 152279399 . C . PASS END=152279399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 152279400 . A . PASS END=152279401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 152279402 . G . PASS END=152279402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 152279403 . T . PASS END=152279403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:14,0 chr1 152279404 . C . PASS END=152279404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 152279405 . T . PASS END=152279405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 152279406 . T G, 33.23 PASS DP=14;MQ=36.53;MQRankSum=0.919;ReadPosRankSum=-0.071;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,4,0:0.286,0.000:14:6,1,0:4,3,0:33:68,0,41,143,358,501:127,0,255:10,0:3.3234e+01,2.2312e-03,4.4127e+01,1.4307e+02,3.9238e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,3,1:8,2,2,2 chr1 152279407 . T . PASS END=152279409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 152279410 . C . PASS END=152279410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 152279411 . C . PASS END=152279411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 152279412 . T . PASS END=152279412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 152279413 . G . PASS END=152279414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 152279415 . A . PASS END=152279415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:13,0 chr1 152279416 . C . PASS END=152279417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 152279418 . T . PASS END=152279418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 152279419 . G . PASS END=152279419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 152279420 . A . PASS END=152279420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:14,0 chr1 152279421 . T . PASS END=152279425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 152279426 . C . PASS END=152279426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 152279427 . C . PASS END=152279429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 152279430 . T . PASS END=152279432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 152279433 . A . PASS END=152279433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 152279434 . T . PASS END=152279434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,462:0,17,255:13,0 chr1 152279435 . G . PASS END=152279435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:12,0 chr1 152279436 . G . PASS END=152279436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 152279437 . G . PASS END=152279437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 152279438 . A . PASS END=152279438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:12,0 chr1 152279439 . T . PASS END=152279443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,498:0,31,255:13,0 chr1 152279444 . C . PASS END=152279445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,540:0,34,255:13,0 chr1 152279446 . G . PASS END=152279446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 152279447 . C . PASS END=152279447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,525:0,32,255:13,0 chr1 152279448 . C . PASS END=152279448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 152279449 . T . PASS END=152279450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,557:0,32,255:13,0 chr1 152279451 . T . PASS END=152279453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 152279454 . A . PASS END=152279454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr1 152279455 . C . PASS END=152279458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 152279459 . A . PASS END=152279459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:12,0 chr1 152279460 . G . PASS END=152279461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152279462 . A . PASS END=152279462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:12,0 chr1 152279463 . A . PASS END=152279463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 152279464 . G . PASS END=152279464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 152279465 . T . PASS END=152279465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 152279466 . C . PASS END=152279468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:15,0 chr1 152279469 . T . PASS END=152279469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 152279470 . G . PASS END=152279470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 152279471 . T . PASS END=152279471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 152279472 . G . PASS END=152279473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 152279474 . G . PASS END=152279478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 152279479 . G . PASS END=152279480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 152279481 . G . PASS END=152279482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:16,0 chr1 152279483 . C . PASS END=152279486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 152279487 . T . PASS END=152279487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 152279488 . T . PASS END=152279494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr1 152279495 . A . PASS END=152279499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,922:0,66,255:25,0 chr1 152279500 . T . PASS END=152279513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:30,0 chr1 152279514 . A . PASS END=152279514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 152279515 . T . PASS END=152279526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1131:0,80,255:34,0 chr1 152279527 . T . PASS END=152279527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:34,0 chr1 152279528 . C . PASS END=152279691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:36:0,96,1473:0,96,255:40,0 chr1 152279692 . G . PASS END=152279699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1305:0,114,255:37,0 chr1 152279700 . T . PASS END=152279700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1185:0,61,255:30,0 chr1 152279701 . G . PASS END=152279701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:39:0,93,1395:0,100,255:31,0 chr1 152279702 . A . PASS END=152279702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:30,0 chr1 152279703 . T . PASS END=152279728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1247:0,89,255:34,0 chr1 152279729 . C T, 47.18 PASS DP=37;MQ=169.12;MQRankSum=-3.939;ReadPosRankSum=1.916;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,16,0:0.432,0.000:37:10,6,0:11,10,0:46:82,0,50,572,748,1320:255,0,255:17,0:4.7179e+01,1.0484e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,11,5:11,10,7,9 chr1 152279730 . A . PASS END=152279766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1205:0,89,255:40,0 chr1 152279767 . G . PASS END=152279803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,99,1426:0,101,255:40,0 chr1 152279804 . C . PASS END=152279840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,110,1441:0,110,255:40,0 chr1 152279841 . G C, 48.25 PASS DP=51;MQ=142.29;MQRankSum=-4.041;ReadPosRankSum=1.854;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,29,0:0.569,0.000:51:13,12,0:9,17,0:46:83,0,48,1008,730,1738:255,0,255:20,0:4.8250e+01,9.7591e-05,5.1230e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,15,14:8,14,14,15 chr1 152279842 . T . PASS END=152279919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,120,1800:0,122,255:40,0 chr1 152279920 . A G, 47.50 PASS DP=45;MQ=134.12;MQRankSum=-4.375;ReadPosRankSum=4.066;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,29,0:0.644,0.000:45:6,12,0:10,17,0:43:82,0,42,1029,536,1564:255,0,255:16,0:4.7500e+01,2.1149e-04,4.5096e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,19,10:7,9,16,13 chr1 152279921 . A . PASS END=152279957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,122,255:40,0 chr1 152279958 . T . PASS END=152279994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,140,255:40,0 chr1 152279995 . T . PASS END=152280031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:58:0,120,1800:0,151,255:40,0 chr1 152280032 . T C, 48.10 PASS DP=61;MQ=136.21;MQRankSum=-4.251;ReadPosRankSum=4.251;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,35,0:0.574,0.000:61:10,15,0:16,20,0:46:83,0,48,1223,914,2137:255,0,255:24,0:4.8100e+01,1.0225e-04,5.0926e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,14,21:16,10,16,19 chr1 152280033 . G . PASS END=152280069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,173,255:40,0 chr1 152280070 . G . PASS END=152280132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,157,255:40,0 chr1 152280133 . C . PASS END=152280169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,120,1800:0,121,255:40,0 chr1 152280170 . C G, 41.59 PASS DP=54;MQ=90.01;MQRankSum=-0.260;ReadPosRankSum=3.914;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,20,0:0.370,0.000:54:19,10,0:15,10,0:41:76,0,49,715,1208,1923:255,0,255:31,0:4.1594e+01,3.2851e-04,5.1950e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,17,10,10:18,16,12,8 chr1 152280171 . T . PASS END=152280207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,99,1530:0,99,255:40,0 chr1 152280208 . G . PASS END=152280227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:40:0,103,1512:0,103,255:39,0 chr1 152280228 . T . PASS END=152280264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1466:0,87,255:40,0 chr1 152280265 . C G, 30.78 PASS DP=44;MQ=48.59;MQRankSum=1.807;ReadPosRankSum=4.655;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,15,0:0.341,0.000:44:14,6,0:15,9,0:31:66,0,43,421,1021,1442:255,0,255:26,0:3.0778e+01,3.7320e-03,4.6379e+01,4.2122e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,10,6,9:14,15,5,10 chr1 152280266 . T . PASS END=152280346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,120,1744:0,120,255:40,0 chr1 152280347 . C T, 4.07 DRAGENSnpHardQUAL DP=60;MQ=47.14;MQRankSum=0.497;ReadPosRankSum=0.420;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,11,0:0.183,0.000:60:22,5,0:27,6,0:4:37,0,45,385,1702,2088:238,0,255:40,0:4.0670e+00,2.1611e+00,5.0361e+01,3.8758e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,17,7,4:25,24,3,8 chr1 152280348 . T . PASS END=152280371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,176,255:40,0 chr1 152280372 . G A, 26.07 PASS DP=66;MQ=47.41;MQRankSum=-0.873;ReadPosRankSum=1.233;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,19,0:0.292,0.000:65:20,9,0:26,10,0:26:61,0,45,642,1644,2286:255,0,255:40,0:2.6069e+01,1.0815e-02,4.8211e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,24,13,6:22,24,9,10 chr1 152280373 . T . PASS END=152280409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,190,255:40,0 chr1 152280410 . A . PASS END=152280433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,194,255:40,0 chr1 152280434 . A . PASS END=152280470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,197,255:40,0 chr1 152280471 . C G, 19.30 PASS DP=83;MQ=77.40;MQRankSum=-3.180;ReadPosRankSum=5.631;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:62,20,0:0.244,0.000:82:27,9,0:35,11,0:19:54,0,48,715,2165,2880:255,0,255:40,0:1.9299e+01,5.1373e-02,5.1351e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,41,7,13:34,28,10,10 chr1 152280472 . T . PASS END=152280510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,211,255:40,0 chr1 152280511 . G . PASS END=152280519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:86:0,120,1800:0,242,255:40,0 chr1 152280520 . T . PASS END=152280558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,152,255:40,0 chr1 152280559 . T C, 2.73 DRAGENSnpHardQUAL DP=56;MQ=133.44;MQRankSum=-4.551;ReadPosRankSum=4.707;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:47,9,0:0.161,0.000:56:27,6,0:20,3,0:3:34,0,50,306,1639,1945:165,0,255:40,0:2.7331e+00,3.3065e+00,5.6306e+01,3.0922e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,30,7,2:23,24,8,1:152280559 chr1 152280560 . G . PASS END=152280572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,101,1750:0,101,255:40,0 chr1 152280573 . C A, 3.03 DRAGENSnpHardQUAL DP=54;MQ=143.19;MQRankSum=-4.688;ReadPosRankSum=2.994;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:45,9,0:0.167,0.000:54:26,6,0:19,3,0:3:35,0,50,293,1567,1860:164,0,255:40,0:3.0325e+00,2.9882e+00,5.5988e+01,2.9590e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,24,7,2:26,19,8,1:152280559 chr1 152280574 . G . PASS END=152280596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,137,255:40,0 chr1 152280597 . A G, 0.03 DRAGENSnpHardQUAL DP=50;MQ=154.70;MQRankSum=-3.950;ReadPosRankSum=0.625;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:43,6,0:0.122,0.000:49:26,5,0:17,1,0:22:13,0,50,215,1471,1685:99,0,255:38,0:2.8231e-02,2.1885e+01,7.4885e+01,2.3648e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,26,5,1:22,21,6,0:152280559 chr1 152280598 . T . PASS END=152280613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,133,255:40,0 chr1 152280614 . C . LowGQ END=152280614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:0:47:0,0,1341:69,0,255:37,0 chr1 152280615 . A . PASS END=152280634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,101,1418:0,101,255:40,0 chr1 152280635 . C . PASS END=152280641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1451:0,117,255:39,0 chr1 152280642 . T . PASS END=152280645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1412:0,101,255:39,0 chr1 152280646 . C . PASS END=152280646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1457:0,49,255:35,0 chr1 152280647 . G . PASS END=152280648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 152280649 . G . PASS END=152280649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1366:0,46,255:36,0 chr1 152280650 . G . PASS END=152280657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,105,1575:0,107,255:39,0 chr1 152280658 . G . PASS END=152280658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:13:43:0,13,1404:0,13,255:36,0 chr1 152280659 . T . PASS END=152280664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,111,1665:0,123,255:38,0 chr1 152280665 . G . PASS END=152280665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1396:0,46,255:37,0 chr1 152280666 . C . PASS END=152280668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 152280669 . T . LowGQ END=152280671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:0:40:0,0,1208:0,0,255:35,0 chr1 152280672 . T . PASS END=152280684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,108,1620:0,120,255:40,0 chr1 152280685 . C . LowGQ END=152280685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:0:45:0,0,1333:58,0,255:37,0 chr1 152280686 . C . PASS END=152280686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 152280687 . C . LowGQ END=152280688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:45:0,0,1197:97,0,255:36,0 chr1 152280689 . C . PASS END=152280690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 152280691 . A . LowGQ END=152280691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:46:0,0,1194:111,0,255:36,0 chr1 152280692 . G . PASS END=152280735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:44:0,87,1681:0,87,255:40,0 chr1 152280736 . T C, 33.50 PASS DP=53;MQ=205.46;MQRankSum=-5.534;ReadPosRankSum=2.848;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:37,15,0:0.288,0.000:52:27,9,0:10,6,0:33:68,0,50,533,1278,1811:255,0,255:37,0:3.3497e+01,1.9634e-03,5.3002e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,14,10,5:19,18,8,7:152280736 chr1 152280737 . G . PASS END=152280758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,142,255:40,0 chr1 152280759 . A G, 44.36 PASS DP=63;MQ=188.96;MQRankSum=-6.077;ReadPosRankSum=0.730;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:38,24,0:0.387,0.000:62:26,15,0:12,9,0:44:79,0,50,858,1350,2208:255,0,255:36,0:4.4357e+01,1.8095e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,15,15,9:21,17,12,12:152280736 chr1 152280760 . T . PASS END=152280781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,154,255:40,0 chr1 152280782 . A G, 49.10 PASS DP=67;MQ=180.87;MQRankSum=-4.309;ReadPosRankSum=0.048;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,47,0:0.701,0.000:67:13,29,0:7,18,0:46:84,0,46,184,184,184:255,0,255:19,0:4.9100e+01,1.0976e-04,4.8854e+01,1.8387e+02,2.1864e+02,1.8688e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,9,28,19:12,8,26,21 chr1 152280783 . T . PASS END=152280787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,187,255:40,0 chr1 152280788 . T G, 49.10 PASS DP=67;MQ=180.87;MQRankSum=-6.447;ReadPosRankSum=0.601;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,29,0:0.433,0.000:67:26,16,0:12,13,0:46:84,0,46,184,184,184:255,0,255:35,0:4.9100e+01,1.0976e-04,4.8854e+01,1.8387e+02,2.1864e+02,1.8688e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,18,19,10:22,16,16,13 chr1 152280789 . T . PASS END=152280863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:68:0,120,1800:0,166,255:40,0 chr1 152280864 . A G, 48.30 PASS DP=87;MQ=131.00;MQRankSum=-6.524;ReadPosRankSum=1.503;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,61,0:0.709,0.000:86:12,31,0:13,30,0:38:83,0,35,2071,893,2964:255,0,255:21,0:4.8301e+01,7.4946e-04,3.8019e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,16,34,27:12,13,26,35 chr1 152280865 . G . PASS END=152280899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:88:0,120,1800:0,229,255:40,0 chr1 152280900 . T G, 46.94 PASS DP=88;MQ=135.20;MQRankSum=-6.784;ReadPosRankSum=5.004;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,40,0:0.460,0.000:87:27,16,0:20,24,0:46:82,0,50,1402,1636,3038:255,0,255:40,0:4.6943e+01,1.0950e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,23,21,19:22,25,19,21 chr1 152280901 . T . PASS END=152280937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:88:0,120,1800:0,193,255:40,0 chr1 152280938 . G . PASS END=152280964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:95:0,120,1800:0,154,255:40,0 chr1 152280965 . C . PASS END=152281006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:90:0,120,1800:0,253,255:40,0 chr1 152281007 . A G, 47.87 PASS DP=93;MQ=201.09;MQRankSum=-7.655;ReadPosRankSum=3.060;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:55,38,0:0.409,0.000:93:34,18,0:21,20,0:46:83,0,47,183,183,183:255,0,255:40,0:4.7871e+01,1.1442e-04,5.0000e+01,1.8264e+02,2.1741e+02,1.8565e+02:0.00,34.77,37.78,34.77,69.54,37.78:36,19,17,21:31,24,19,19:152281007 chr1 152281008 . A G, 47.87 PASS DP=94;MQ=200.67;MQRankSum=-7.720;ReadPosRankSum=2.425;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:55,39,0:0.415,0.000:94:34,19,0:21,20,0:46:83,0,47,183,183,183:255,0,255:40,0:4.7871e+01,1.1442e-04,5.0000e+01,1.8264e+02,2.1741e+02,1.8565e+02:0.00,34.77,37.78,34.77,69.54,37.78:36,19,18,21:31,24,20,19:152281007 chr1 152281009 . T . PASS END=152281038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:87:0,120,1800:0,229,255:40,0 chr1 152281039 . G A, 45.99 PASS DP=97;MQ=200.61;MQRankSum=-6.724;ReadPosRankSum=2.221;FractionInformativeReads=0.990;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:58,38,0:0.396,0.000:96:32,20,0:26,18,0:45:81,0,50,1326,2063,3389:255,0,255:40,0:4.5987e+01,1.3124e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,25,18,20:33,25,18,20 chr1 152281040 . C . PASS END=152281076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:89:0,120,1800:0,223,255:40,0 chr1 152281077 . G . PASS END=152281190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:86:0,120,1800:0,238,255:40,0 chr1 152281191 . C . PASS END=152281227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:94:0,120,1800:0,255,255:40,0 chr1 152281228 . C G, 36.37 PASS DP=98;MQ=127.97;MQRankSum=-3.590;ReadPosRankSum=4.087;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:67,31,0:0.316,0.000:98:43,17,0:24,14,0:36:71,0,50,1109,2284,3393:255,0,255:40,0:3.6368e+01,1.0257e-03,5.2701e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,35,16,15:34,33,22,9 chr1 152281229 . T . PASS END=152281289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,0:123:99:99:0,120,1800:0,255,255:40,0 chr1 152281290 . A G, 30.65 PASS DP=125;MQ=115.68;MQRankSum=-6.491;ReadPosRankSum=4.627;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:90,35,0:0.280,0.000:125:54,21,0:36,14,0:31:65,0,49,1251,3092,4343:255,0,255:40,0:3.0653e+01,3.7647e-03,5.2104e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:52,38,18,17:50,40,22,13:152281290 chr1 152281291 . T . PASS END=152281303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:136,0:136:99:125:0,120,1800:0,255,255:40,0 chr1 152281304 . A C, 29.73 PASS DP=135;MQ=119.61;MQRankSum=-6.341;ReadPosRankSum=5.947;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:98,37,0:0.274,0.000:135:60,22,0:38,15,0:30:65,0,49,1286,3457,4744:255,0,255:40,0:2.9733e+01,4.6469e-03,5.2105e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:58,40,19,18:52,46,22,15:152281290 chr1 152281305 . G . PASS END=152281341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,1:139:99:134:0,120,1800:0,255,255:40,0 chr1 152281342 . G . PASS END=152281441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:124,0:124:99:96:0,120,1800:0,255,255:40,0 chr1 152281442 . A . PASS END=152281478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:82:0,120,1800:0,203,255:40,0 chr1 152281479 . G T, 49.00 PASS DP=82;MQ=147.83;MQRankSum=-5.107;ReadPosRankSum=4.481;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,52,0:0.634,0.000:82:14,26,0:16,26,0:45:84,0,44,1696,1073,2769:255,0,255:25,0:4.9000e+01,1.4030e-04,4.7043e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,18,34:13,17,20,32 chr1 152281480 . T . PASS END=152281522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:71:0,120,1800:0,199,255:40,0 chr1 152281523 . A C, 26.49 PASS DP=83;MQ=137.31;MQRankSum=-6.381;ReadPosRankSum=3.100;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:61,22,0:0.265,0.000:83:30,11,0:31,11,0:26:61,0,50,758,2112,2870:255,0,255:40,0:2.6493e+01,9.7700e-03,5.3010e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,34,7,15:34,27,10,12:152281523 chr1 152281524 . A . PASS END=152281533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,233,255:40,0 chr1 152281534 . A T, 20.97 PASS DP=81;MQ=136.43;MQRankSum=-6.024;ReadPosRankSum=5.021;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:62,19,0:0.235,0.000:81:30,10,0:32,9,0:21:56,0,50,680,2160,2839:255,0,255:40,0:2.0973e+01,3.4875e-02,5.3035e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,32,5,14:32,30,14,5:152281523 chr1 152281535 . G . PASS END=152281573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,196,255:40,0 chr1 152281574 . C . PASS END=152281634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:59:0,120,1800:0,147,255:40,0 chr1 152281635 . C . PASS END=152281635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:28:61:0,28,1978:0,28,255:40,0 chr1 152281636 . C . PASS END=152281643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,149,255:40,0 chr1 152281644 . T . PASS END=152281644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1756:0,79,255:40,0 chr1 152281645 . G . PASS END=152281645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 152281646 . A . PASS END=152281646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1831:0,79,255:40,0 chr1 152281647 . T . PASS END=152281652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,120,1800:0,136,255:40,0 chr1 152281653 . T . PASS END=152281689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,106,1710:0,106,255:40,0 chr1 152281690 . C T, 49.27 PASS DP=42;MQ=190.76;MQRankSum=-1.845;ReadPosRankSum=2.805;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:13,13,0:10,6,0:48:84,0,50,651,757,1407:255,0,255:23,0:4.9273e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,6,13:9,14,4,15 chr1 152281691 . G . PASS END=152281727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,113,1554:0,113,255:40,0 chr1 152281728 . G . PASS END=152281910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:35:0,93,1216:0,93,255:40,0 chr1 152281911 . T . PASS END=152281947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,152,255:40,0 chr1 152281948 . G A, 39.52 PASS DP=64;MQ=169.89;MQRankSum=-1.587;ReadPosRankSum=2.130;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,21,0:0.328,0.000:64:24,12,0:19,9,0:39:74,0,50,743,1509,2252:255,0,255:40,0:3.9522e+01,5.0662e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,19,10,11:21,22,7,14 chr1 152281949 . C . PASS END=152281985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,170,255:40,0 chr1 152281986 . G . PASS END=152282229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:32:0,86,1233:0,86,255:40,0 chr1 152282230 . T . PASS END=152282230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:29,0 chr1 152282231 . T . PASS END=152282256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1122:0,83,255:33,0 chr1 152282257 . T . PASS END=152282257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:30,0 chr1 152282258 . C . PASS END=152282266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1087:0,82,255:33,0 chr1 152282267 . G A, 50.00 PASS DP=36;MQ=227.46;MQRankSum=-0.111;ReadPosRankSum=0.744;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,18,0:0.500,0.000:36:8,5,0:10,13,0:48:85,0,50,628,606,1234:255,0,255:15,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,9,9:5,13,8,10 chr1 152282268 . C . PASS END=152282269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 152282270 . C . PASS END=152282270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:26,0 chr1 152282271 . A . PASS END=152282310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,85,255:34,0 chr1 152282311 . C T, 50.00 PASS DP=36;MQ=202.87;MQRankSum=-2.631;ReadPosRankSum=-0.417;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,21,0:0.583,0.000:36:8,6,0:7,15,0:47:85,0,48,743,499,1241:255,0,255:14,0:5.0000e+01,8.0765e-05,5.0646e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,13,8:8,7,10,11 chr1 152282312 . G . PASS END=152282328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1278:0,92,255:34,0 chr1 152282329 . C . PASS END=152282329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:32,0 chr1 152282330 . C . PASS END=152282348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1164:0,85,255:35,0 chr1 152282349 . T . PASS END=152282378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1194:0,83,255:35,0 chr1 152282379 . G . PASS END=152282379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1163:0,55,255:27,0 chr1 152282380 . G . PASS END=152282383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 152282384 . T . PASS END=152282384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,953:0,68,255:29,0 chr1 152282385 . C . PASS END=152282386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:30,0 chr1 152282387 . C . PASS END=152282387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 152282388 . T . PASS END=152282396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1180:0,93,255:31,0 chr1 152282397 . A . PASS END=152282397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:25,0 chr1 152282398 . G . PASS END=152282398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152282399 . T . PASS END=152282399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 152282400 . G . PASS END=152282401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 152282402 . C . PASS END=152282402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 152282403 . T . PASS END=152282404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152282405 . A . PASS END=152282405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr1 152282406 . T . PASS END=152282406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152282407 . T . PASS END=152282407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:24,0 chr1 152282408 . G . PASS END=152282435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,73,255:25,0 chr1 152282436 . A . PASS END=152282444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 152282445 . A . PASS END=152282447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152282448 . T . PASS END=152282449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:43:20:0,43,577:0,43,255:19,0 chr1 152282450 . C . PASS END=152282450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 152282451 . T . PASS END=152282451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,611:0,27,255:18,0 chr1 152282452 . T . PASS END=152282454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 152282455 . T . PASS END=152282463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 152282464 . G . PASS END=152282464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152282465 . G . PASS END=152282465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 152282466 . G . PASS END=152282466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 152282467 . T . PASS END=152282469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 152282470 . C . PASS END=152282470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 152282471 . T . PASS END=152282487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 152282488 . T . PASS END=152282489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 152282490 . C . PASS END=152282490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152282491 . T . PASS END=152282491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 152282492 . C . PASS END=152282496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152282497 . G . PASS END=152282497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 152282498 . C . PASS END=152282503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152282504 . C . PASS END=152282505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 152282506 . T . PASS END=152282507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152282508 . A . PASS END=152282508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 152282509 . T . PASS END=152282517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152282518 . G . PASS END=152282530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,721:0,57,255:19,0 chr1 152282531 . A . PASS END=152282532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 152282533 . C . PASS END=152282533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 152282534 . G . PASS END=152282544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 152282545 . T . PASS END=152282545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr1 152282546 . C . PASS END=152282552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 152282553 . G . PASS END=152282556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 152282557 . C . PASS END=152282561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 152282562 . A . PASS END=152282564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 152282565 . G . PASS END=152282602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:24,0 chr1 152282603 . T . PASS END=152282604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 152282605 . G . PASS END=152282644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 152282645 . G . PASS END=152282646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152282647 . C . PASS END=152282683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1096:0,87,255:36,0 chr1 152282684 . G A, 50.00 PASS DP=39;MQ=223.49;MQRankSum=0.694;ReadPosRankSum=1.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,22,0:0.564,0.000:39:8,10,0:9,12,0:48:85,0,49,778,608,1386:255,0,255:15,0:5.0000e+01,7.3517e-05,5.1607e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,4,13,9:8,9,13,9 chr1 152282685 . T . PASS END=152282721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1235:0,102,255:37,0 chr1 152282722 . T . PASS END=152282879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1250:0,87,255:40,0 chr1 152282880 . C . PASS END=152282899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,107,1490:0,107,255:40,0 chr1 152282900 . T . PASS END=152282900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1413:0,74,255:39,0 chr1 152282901 . G . PASS END=152282916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,110,1573:0,110,255:40,0 chr1 152282917 . G T, 48.97 PASS DP=40;MQ=204.51;MQRankSum=-0.775;ReadPosRankSum=2.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,18,0:0.450,0.000:40:13,11,0:9,7,0:48:84,0,50,586,770,1356:255,0,255:22,0:4.8968e+01,7.6882e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,10,8:8,14,7,11 chr1 152282918 . A . PASS END=152282954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:38:0,82,1374:0,82,255:40,0 chr1 152282955 . G . PASS END=152283198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:38:0,81,1234:0,81,255:40,0 chr1 152283199 . C . PASS END=152283235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:90:0,120,1800:0,246,255:40,0 chr1 152283236 . T C, 45.77 PASS DP=95;MQ=131.07;MQRankSum=-7.370;ReadPosRankSum=4.972;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,42,0:0.442,0.000:95:23,27,0:30,15,0:45:81,0,50,1457,1866,3323:255,0,255:40,0:4.5771e+01,1.3668e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,25,19,23:28,25,22,20 chr1 152283237 . G . PASS END=152283282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:90:0,120,1800:0,252,255:40,0 chr1 152283283 . C T, 47.72 PASS DP=90;MQ=140.12;MQRankSum=-7.270;ReadPosRankSum=5.485;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,43,0:0.478,0.000:90:21,26,0:26,17,0:47:82,0,50,1472,1583,3054:255,0,255:40,0:4.7723e+01,9.5003e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,31,19,24:26,21,18,25 chr1 152283284 . G . PASS END=152283320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,228,255:40,0 chr1 152283321 . T . PASS END=152283422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:38:0,97,1236:0,97,255:40,0 chr1 152283423 . T . PASS END=152283423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1189:0,59,255:34,0 chr1 152283424 . T . PASS END=152283462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:94:37:0,94,1274:0,94,255:39,0 chr1 152283463 . T . PASS END=152283463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1365:0,73,255:31,0 chr1 152283464 . C . PASS END=152283476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:89:34:0,89,1294:0,89,255:33,0 chr1 152283477 . A . PASS END=152283477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1237:0,77,255:32,0 chr1 152283478 . T . PASS END=152283488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:33,0 chr1 152283489 . G . PASS END=152283489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 152283490 . G . PASS END=152283622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:33:0,89,1205:0,89,255:39,0 chr1 152283623 . A . PASS END=152283623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1285:0,65,255:35,0 chr1 152283624 . G . PASS END=152283824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:39:0,96,1167:0,96,255:40,0 chr1 152283825 . G . PASS END=152283861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,158,255:40,1 chr1 152283862 . G C, 46.35 PASS DP=65;MQ=102.51;MQRankSum=-3.227;ReadPosRankSum=4.098;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,36,0:0.554,0.000:65:12,18,0:17,18,0:45:81,0,47,1194,984,2192:255,0,255:30,0:4.6350e+01,1.4600e-04,4.9799e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,16,20,16:14,15,22,14 chr1 152283863 . C . PASS END=152283899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,153,255:40,0 chr1 152283900 . C . PASS END=152283937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,146,255:40,0 chr1 152283938 . G . PASS END=152283974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:98:50:0,98,1762:0,98,255:40,0 chr1 152283975 . A G, 45.65 PASS DP=50;MQ=70.77;MQRankSum=-1.495;ReadPosRankSum=3.391;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,28,0:0.560,0.000:50:10,14,0:12,14,0:43:80,0,44,907,785,1692:255,0,255:20,0:4.5650e+01,1.9984e-04,4.7261e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,10,18:10,12,18,10 chr1 152283976 . G . PASS END=152284012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,107,1800:0,107,255:40,0 chr1 152284013 . A . PASS END=152284160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:90:42:0,90,1434:0,90,255:40,0 chr1 152284161 . A . PASS END=152284202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:36:0,95,1347:0,95,255:40,0 chr1 152284203 . T C, 40.17 PASS DP=47;MQ=109.74;MQRankSum=-5.568;ReadPosRankSum=2.159;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,17,0:0.362,0.000:47:14,11,0:16,6,0:39:75,0,45,175,175,175:255,0,255:29,0:4.0173e+01,4.8927e-04,4.7800e+01,1.7494e+02,2.0971e+02,1.7795e+02:0.00,34.77,37.78,34.77,69.54,37.78:21,9,9,8:15,15,7,10:152284203 chr1 152284204 . T . PASS END=152284207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,120,1800:0,133,255:40,0 chr1 152284208 . T C, 40.17 PASS DP=49;MQ=110.26;MQRankSum=-5.631;ReadPosRankSum=0.861;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:31,18,0:0.367,0.000:49:14,11,0:17,7,0:39:75,0,45,175,175,175:255,0,255:30,0:4.0173e+01,4.8927e-04,4.7800e+01,1.7494e+02,2.0971e+02,1.7795e+02:0.00,34.77,37.78,34.77,69.54,37.78:22,9,10,8:15,16,7,11:152284203 chr1 152284209 . G A, 40.17 PASS DP=50;MQ=110.62;MQRankSum=-5.669;ReadPosRankSum=1.061;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:32,18,0:0.360,0.000:50:14,11,0:18,7,0:39:75,0,45,175,175,175:255,0,255:31,0:4.0173e+01,4.8927e-04,4.7800e+01,1.7494e+02,2.0971e+02,1.7795e+02:0.00,34.77,37.78,34.77,69.54,37.78:23,9,10,8:15,17,7,11:152284203 chr1 152284210 . C . PASS END=152284252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:52:0,120,1800:0,123,255:40,0 chr1 152284253 . G . PASS END=152284376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,141,255:40,0 chr1 152284377 . G . PASS END=152284377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:49:55:0,49,1847:0,49,255:40,0 chr1 152284378 . T . PASS END=152284423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:52:0,82,1800:0,82,255:40,0 chr1 152284424 . G . PASS END=152284424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,5:74:29:74:0,29,2429:0,29,255:40,0 chr1 152284425 . T . PASS END=152284477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,191,255:40,0 chr1 152284478 . A . PASS END=152284478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,4:74:68:74:0,68,2511:0,68,255:40,0 chr1 152284479 . C . PASS END=152284496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,209,255:40,0 chr1 152284497 . A . PASS END=152284497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,4:75:79:75:0,79,2543:0,79,255:40,0 chr1 152284498 . T . PASS END=152284504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,209,255:40,0 chr1 152284505 . C . PASS END=152284505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,5:77:38:77:0,38,2499:0,38,255:40,0 chr1 152284506 . A . PASS END=152284816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:95:62:0,95,1800:0,95,255:40,0 chr1 152284817 . T . PASS END=152284853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,117,1800:0,117,255:40,0 chr1 152284854 . A G, 50.00 PASS DP=70;MQ=156.57;MQRankSum=-3.062;ReadPosRankSum=3.062;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,39,0:0.557,0.000:70:15,23,0:16,16,0:48:85,0,49,1394,1043,2438:255,0,255:30,0:5.0000e+01,7.2481e-05,5.1753e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,19,18,21:16,15,18,21 chr1 152284855 . T . PASS END=152284891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,164,255:40,0 chr1 152284892 . G . PASS END=152285061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,103,1587:0,103,255:40,0 chr1 152285062 . T . PASS END=152285098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,154,255:40,0 chr1 152285099 . C T, 46.17 PASS DP=63;MQ=144.55;MQRankSum=0.358;ReadPosRankSum=5.247;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,25,0:0.397,0.000:63:20,15,0:18,10,0:45:81,0,50,878,1359,2237:255,0,255:34,0:4.6170e+01,1.2762e-04,5.2800e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,21,16,9:17,21,14,11 chr1 152285100 . T . PASS END=152285136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,176,255:40,0 chr1 152285137 . G . PASS END=152285424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:60:0,100,1800:0,100,255:40,0 chr1 152285425 . T . PASS END=152285425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,4:66:66:66:0,66,2215:0,66,255:40,0 chr1 152285426 . G . PASS END=152285530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:82:52:0,82,1800:0,82,255:40,0 chr1 152285531 . G . PASS END=152285531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1829:0,79,255:40,0 chr1 152285532 . C . PASS END=152285892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:43:0,102,1628:0,102,255:40,0 chr1 152285893 . C . PASS END=152285929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,152,255:40,0 chr1 152285930 . G A, 48.46 PASS DP=53;MQ=192.22;MQRankSum=-3.096;ReadPosRankSum=3.634;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,23,0:0.434,0.000:53:18,11,0:12,12,0:47:83,0,50,785,1036,1821:255,0,255:28,0:4.8460e+01,8.3612e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,10,13:13,17,8,15 chr1 152285931 . C . PASS END=152285998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:38:0,97,1485:0,97,255:40,0 chr1 152285999 . G . PASS END=152285999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:33,0 chr1 152286000 . T . PASS END=152286001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 152286002 . T C, 43.37 PASS DP=39;MQ=231.29;MQRankSum=-0.893;ReadPosRankSum=1.098;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,14,0:0.359,0.000:39:17,6,0:8,8,0:43:78,0,50,501,840,1341:255,0,255:22,0:4.3371e+01,2.2159e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,10,3,11:11,14,7,7 chr1 152286003 . G . PASS END=152286031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1379:0,95,255:36,0 chr1 152286032 . C T, 50.00 PASS DP=36;MQ=241.69;MQRankSum=1.123;ReadPosRankSum=1.756;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,18,0:0.500,0.000:36:12,8,0:6,10,0:48:85,0,50,605,591,1196:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,9,9:10,8,13,5 chr1 152286033 . A . PASS END=152286069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1172:0,85,255:35,0 chr1 152286070 . T . PASS END=152286070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152286071 . T . PASS END=152286071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 152286072 . T . PASS END=152286075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 152286076 . G . PASS END=152286079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 152286080 . G . PASS END=152286082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr1 152286083 . C . PASS END=152286090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1039:0,71,255:26,0 chr1 152286091 . T . PASS END=152286094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152286095 . T . PASS END=152286100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 152286101 . G . PASS END=152286102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152286103 . C . PASS END=152286121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 152286122 . G . PASS END=152286124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152286125 . C . PASS END=152286125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 152286126 . A . PASS END=152286329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:30:0,80,1133:0,80,255:40,0 chr1 152286330 . G . PASS END=152286366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,137,255:40,0 chr1 152286367 . C A, 50.00 PASS DP=50;MQ=229.71;MQRankSum=-1.319;ReadPosRankSum=2.551;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,28,0:0.560,0.000:50:14,15,0:8,13,0:48:85,0,49,865,779,1644:255,0,255:21,0:5.0000e+01,7.0410e-05,5.2066e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,14,14:12,10,17,11 chr1 152286368 . C . PASS END=152286404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,109,1678:0,109,255:40,0 chr1 152286405 . T . PASS END=152287223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:90:43:0,90,1350:0,106,255:40,0 chr1 152287795 . C . PASS END=152287932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:67:0,120,1800:0,167,255:40,1 chr1 152323086 . T . PASS END=152323089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,817:0,72,255:24,0 chr1 152323090 . T . PASS END=152323091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 152323092 . T . PASS END=152323092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 152323093 . C . PASS END=152323094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 152323095 . A . PASS END=152323095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:27,0 chr1 152323096 . G . PASS END=152323103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,951:0,87,255:30,0 chr1 152323104 . C . PASS END=152323104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:30,0 chr1 152323105 . T . PASS END=152323131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1109:0,80,255:40,0 chr1 152323132 . G T, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.534;ReadPosRankSum=1.157;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,21,0:0.500,0.000:42:13,11,0:8,10,0:48:85,0,50,657,751,1408:255,0,255:21,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,15,6:9,12,9,12 chr1 152323133 . A . PASS END=152323169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,114,1681:0,116,255:40,0 chr1 152323170 . A . PASS END=152323686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:34:0,80,1188:0,80,255:40,0 chr1 152323687 . G . PASS END=152323687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:30,0 chr1 152323688 . C . PASS END=152323706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1219:0,86,255:32,0 chr1 152323707 . A . PASS END=152323707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:29,0 chr1 152323708 . T . PASS END=152323713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1440:0,111,255:34,0 chr1 152323714 . G . PASS END=152323714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr1 152323715 . A . PASS END=152323756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:32:0,80,1168:0,80,255:36,0 chr1 152323757 . C . PASS END=152323757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr1 152323758 . T . PASS END=152323838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1174:0,84,255:39,0 chr1 152323839 . G . PASS END=152323839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1404:0,54,255:37,0 chr1 152323840 . T . PASS END=152323840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1352:0,68,255:37,0 chr1 152323841 . G . PASS END=152323843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:41:0,87,1399:0,87,255:37,0 chr1 152323844 . T . PASS END=152323847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:46:41:0,46,1366:0,46,255:38,0 chr1 152323848 . A . PASS END=152323862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1405:0,81,255:40,0 chr1 152323863 . A . PASS END=152323863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1504:0,66,255:40,0 chr1 152323864 . T . PASS END=152323938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:45:0,83,1435:0,83,255:40,0 chr1 152323939 . G . PASS END=152323939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,5:64:29:64:0,29,2071:0,29,255:40,0 chr1 152323940 . A . PASS END=152324085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:80:41:0,80,1390:0,80,255:40,0 chr1 152324086 . C . PASS END=152324086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1506:0,74,255:40,0 chr1 152324087 . C . PASS END=152324098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:44:0,115,1538:0,115,255:40,0 chr1 152324099 . C . PASS END=152324099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1397:0,60,255:37,0 chr1 152324100 . G . PASS END=152324110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1479:0,93,255:40,0 chr1 152324111 . G . PASS END=152324111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1405:0,60,255:36,0 chr1 152324112 . A . PASS END=152324113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,117,1755:0,126,255:39,0 chr1 152324114 . C . PASS END=152324114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1319:0,65,255:36,0 chr1 152324115 . G . PASS END=152324148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:82:39:0,82,1344:0,82,255:38,0 chr1 152324149 . C . PASS END=152324149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:32,0 chr1 152324150 . C . PASS END=152324163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,92,255:34,0 chr1 152324164 . T . PASS END=152324164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:29,0 chr1 152324165 . A . PASS END=152324181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:33,0 chr1 152324182 . G . PASS END=152324182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1102:0,55,255:29,0 chr1 152324183 . C . PASS END=152324194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1310:0,92,255:33,0 chr1 152324195 . T . PASS END=152324195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1080:0,69,255:30,0 chr1 152324196 . T . PASS END=152324241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1250:0,81,255:38,0 chr1 152324242 . T . PASS END=152324242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:35,0 chr1 152324243 . G . PASS END=152324252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:84:38:0,84,1280:0,84,255:38,0 chr1 152324253 . A . PASS END=152324253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1343:0,65,255:37,0 chr1 152324254 . T . PASS END=152324256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1465:0,104,255:39,0 chr1 152324257 . G . PASS END=152324257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1199:0,61,255:36,0 chr1 152324258 . C . PASS END=152324258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1216:0,51,255:35,0 chr1 152324259 . T . PASS END=152324259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1307:0,100,255:38,0 chr1 152324260 . G . PASS END=152324260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:37,0 chr1 152324261 . T . PASS END=152324261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:83:39:0,83,1124:0,83,255:36,0 chr1 152324262 . T . PASS END=152324262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:28:39:0,28,1097:0,28,255:33,0 chr1 152324263 . T . PASS END=152324269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1350:0,100,255:38,0 chr1 152324270 . G . PASS END=152324270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:32,0 chr1 152324271 . A . PASS END=152324277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1311:0,95,255:32,0 chr1 152324278 . C . PASS END=152324279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:60:33:0,60,1090:0,60,255:31,0 chr1 152324280 . G . PASS END=152324298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1101:0,80,255:33,0 chr1 152324299 . G . PASS END=152324299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr1 152324300 . A . PASS END=152324302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1161:0,80,255:30,0 chr1 152324303 . C . PASS END=152324303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:28,0 chr1 152324304 . T . PASS END=152324304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 152324305 . G . PASS END=152324305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,996:0,48,255:28,0 chr1 152324306 . A . PASS END=152324307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 152324308 . T . PASS END=152324308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 152324309 . C . PASS END=152324309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:26,0 chr1 152324310 . T . PASS END=152324310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:28,0 chr1 152324311 . G . PASS END=152324311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1022:0,46,255:27,0 chr1 152324312 . G . PASS END=152324312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 152324313 . A . PASS END=152324314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 152324315 . A . PASS END=152324315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1031:0,41,255:27,0 chr1 152324316 . G . PASS END=152324316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:28,0 chr1 152324317 . T . PASS END=152324317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:27,0 chr1 152324318 . G . PASS END=152324318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:50:33:0,50,1114:0,50,255:26,0 chr1 152324319 . A . PASS END=152324319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:28,0 chr1 152324320 . G . PASS END=152324320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:29,0 chr1 152324321 . A . PASS END=152324321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 152324322 . T . PASS END=152324323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:66:33:0,66,1115:0,66,255:29,0 chr1 152324324 . C . PASS END=152324324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1078:0,30,255:28,0 chr1 152324325 . A . PASS END=152324325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1040:0,66,255:29,0 chr1 152324326 . G . PASS END=152324326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1139:0,55,255:30,0 chr1 152324327 . C . PASS END=152324333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1081:0,85,255:35,0 chr1 152324334 . G . PASS END=152324334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1082:0,71,255:33,0 chr1 152324335 . T . PASS END=152324336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:34,0 chr1 152324337 . A . PASS END=152324337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 152324338 . G . PASS END=152324419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1081:0,82,255:36,0 chr1 152324420 . T . PASS END=152324420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 152324421 . T . PASS END=152324430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:36:0,82,1435:0,82,255:38,0 chr1 152324431 . C . PASS END=152324431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 152324432 . C . PASS END=152324439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,111,1366:0,111,255:37,0 chr1 152324440 . A . PASS END=152324440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:35,0 chr1 152324441 . T . PASS END=152324521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:34:0,81,1141:0,81,255:39,0 chr1 152324522 . T . PASS END=152324522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:26:38:0,26,1153:0,26,255:31,0 chr1 152324523 . G . PASS END=152324539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1141:0,82,255:34,0 chr1 152324540 . G . PASS END=152324540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1086:0,44,255:29,0 chr1 152324541 . T . PASS END=152324541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:30,0 chr1 152324542 . T . PASS END=152324542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:30,0 chr1 152324543 . G . PASS END=152324543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 152324544 . A . PASS END=152324546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1083:0,85,255:30,0 chr1 152324547 . C . PASS END=152324547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:25,0 chr1 152324548 . C . PASS END=152324548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1139:0,44,255:27,0 chr1 152324549 . T . PASS END=152324552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:29,0 chr1 152324553 . T . PASS END=152324557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:26,0 chr1 152324558 . T . PASS END=152324563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:29,0 chr1 152324564 . T . PASS END=152324564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:28,0 chr1 152324565 . G . PASS END=152324566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr1 152324567 . G . PASS END=152324567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 152324568 . T . PASS END=152324569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152324570 . C . PASS END=152324570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:28,0 chr1 152324571 . T . PASS END=152324571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152324572 . G . PASS END=152324572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 152324573 . A . PASS END=152324586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1125:0,80,255:32,0 chr1 152324587 . C . PASS END=152324587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 152324588 . C . PASS END=152324627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1125:0,82,255:31,0 chr1 152324628 . A . PASS END=152324628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 152324629 . G . PASS END=152324631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 152324632 . C . PASS END=152324633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1108:0,63,255:30,0 chr1 152324634 . C . PASS END=152324648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1087:0,83,255:33,0 chr1 152324649 . A . PASS END=152324649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:32,0 chr1 152324650 . C . PASS END=152324654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 152324655 . T . PASS END=152324655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:33,0 chr1 152324656 . C . PASS END=152324658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 152324659 . G . PASS END=152324660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:33,0 chr1 152324661 . C . PASS END=152324683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:38:0,82,1451:0,82,255:40,0 chr1 152324684 . A . PASS END=152324684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1472:0,71,255:38,0 chr1 152324685 . T . PASS END=152324687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:44:0,80,1559:0,80,255:40,0 chr1 152324688 . A . PASS END=152324688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:39,0 chr1 152324689 . G . PASS END=152324695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:42:0,93,1469:0,93,255:40,0 chr1 152324696 . C . PASS END=152324696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1468:0,77,255:39,0 chr1 152324697 . A . PASS END=152324757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:40:0,83,1397:0,83,255:40,0 chr1 152324758 . T . PASS END=152324758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1449:0,79,255:38,0 chr1 152324759 . C . PASS END=152324848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:39:0,84,1260:0,87,255:40,0 chr1 152324849 . C . PASS END=152324849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:32,0 chr1 152324850 . A . PASS END=152324854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1172:0,85,255:34,0 chr1 152324855 . G . PASS END=152324855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:33,0 chr1 152324856 . G . PASS END=152324862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1270:0,89,255:35,0 chr1 152324863 . G . PASS END=152324863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 152324864 . A . PASS END=152324864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1216:0,58,255:31,0 chr1 152324865 . C . PASS END=152324866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:30,0 chr1 152324867 . T . PASS END=152324867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:56:35:0,56,1191:0,56,255:28,0 chr1 152324868 . T . PASS END=152324872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:35:0,91,1191:0,91,255:31,0 chr1 152324873 . C . PASS END=152324873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:29,0 chr1 152324874 . A . PASS END=152324875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:31,0 chr1 152324876 . T . PASS END=152324883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,86,255:26,0 chr1 152324884 . G . PASS END=152324899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1131:0,80,255:33,0 chr1 152324900 . A . PASS END=152324900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:29,0 chr1 152324901 . C . PASS END=152324992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1233:0,86,255:40,0 chr1 152324993 . C . PASS END=152324993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 152324994 . A . PASS END=152325004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 152325005 . T . PASS END=152325005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 152325006 . G . PASS END=152325006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 152325007 . G . PASS END=152325007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 152325008 . C . PASS END=152325008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 152325009 . T . PASS END=152325010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1100:0,74,255:26,0 chr1 152325011 . G . PASS END=152325014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152325015 . A . PASS END=152325018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:26,0 chr1 152325019 . G . PASS END=152325020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1163:0,80,255:28,0 chr1 152325021 . G . PASS END=152325022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 152325023 . G . PASS END=152325023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152325024 . T . PASS END=152325078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,61,255:26,0 chr1 152325079 . T . PASS END=152325079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 152325080 . G . PASS END=152325102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:25,0 chr1 152325103 . G . PASS END=152325103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152325104 . T . PASS END=152325104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 152325105 . C . PASS END=152325106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152325107 . T . PASS END=152325137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:26,0 chr1 152325138 . A . PASS END=152325138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 152325139 . T . PASS END=152325153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,939:0,67,255:26,0 chr1 152325154 . G . PASS END=152325164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152325165 . T . PASS END=152325165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr1 152325166 . G . PASS END=152325185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1164:0,83,255:33,0 chr1 152325186 . A . PASS END=152325186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 152325187 . T . PASS END=152325195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1186:0,96,255:32,0 chr1 152325196 . G . PASS END=152325196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 152325197 . G . PASS END=152325203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:33,0 chr1 152325204 . G . PASS END=152325205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:34:0,66,1227:0,66,255:31,0 chr1 152325206 . A . PASS END=152325209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1241:0,86,255:32,0 chr1 152325210 . T . PASS END=152325211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:30,0 chr1 152325212 . A . PASS END=152325214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:31,0 chr1 152325215 . G . PASS END=152325215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:31,0 chr1 152325216 . T . PASS END=152325220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1149:0,82,255:32,0 chr1 152325221 . G . PASS END=152325222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1148:0,68,255:32,0 chr1 152325223 . T . PASS END=152325232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1174:0,83,255:33,0 chr1 152325233 . C . PASS END=152325233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 152325234 . T . PASS END=152325240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:33,0 chr1 152325241 . T . PASS END=152325241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:29,0 chr1 152325242 . G . PASS END=152325249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:33,0 chr1 152325250 . C . PASS END=152325250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 152325251 . C . PASS END=152325257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:38:0,84,1385:0,84,255:36,0 chr1 152325258 . T . PASS END=152325259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1394:0,79,255:36,0 chr1 152325260 . T . PASS END=152325267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1288:0,94,255:36,0 chr1 152325268 . A . PASS END=152325268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1137:0,72,255:32,0 chr1 152325269 . C . PASS END=152325269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 152325270 . C . PASS END=152325270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:33,0 chr1 152325271 . C . PASS END=152325273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1311:0,80,255:35,0 chr1 152325274 . G . PASS END=152325274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr1 152325275 . A . PASS END=152325277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:36:0,80,1288:0,80,255:33,0 chr1 152325278 . G . PASS END=152325278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:32,0 chr1 152325279 . C . PASS END=152325279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1327:0,95,255:33,0 chr1 152325280 . A . PASS END=152325280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:32,0 chr1 152325281 . C . PASS END=152325291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 152325292 . C . PASS END=152325292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:27,0 chr1 152325293 . T . PASS END=152325302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:29,0 chr1 152325303 . G . PASS END=152325304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr1 152325305 . G . PASS END=152325306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 152325307 . C . PASS END=152325310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,80,255:26,0 chr1 152325311 . A . PASS END=152325311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,952:0,54,255:25,0 chr1 152325312 . T . PASS END=152325338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,969:0,65,255:26,0 chr1 152325339 . T . PASS END=152325339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152325340 . C . PASS END=152325365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,864:0,61,255:26,0 chr1 152325366 . G . PASS END=152325366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152325367 . T . PASS END=152325367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 152325368 . G . PASS END=152325378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 152325379 . G . PASS END=152325400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,917:0,64,255:25,0 chr1 152325401 . G . PASS END=152325402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 152325403 . G . PASS END=152325403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 152325404 . T . PASS END=152325408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:29,0 chr1 152325409 . C . PASS END=152325409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 152325410 . C . PASS END=152325410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152325411 . G . PASS END=152325411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 152325412 . T . PASS END=152325417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1123:0,80,255:31,0 chr1 152325418 . T . PASS END=152325418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:28,0 chr1 152325419 . C . PASS END=152325420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:30,0 chr1 152325421 . T . PASS END=152325421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1068:0,63,255:28,0 chr1 152325422 . G . PASS END=152325423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr1 152325424 . A . PASS END=152325424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,948:0,63,255:28,0 chr1 152325425 . C . PASS END=152325426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1080:0,90,255:30,0 chr1 152325427 . G . PASS END=152325432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,950:0,60,255:29,0 chr1 152325433 . T . PASS END=152325433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152325434 . C . PASS END=152325434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 152325435 . T . PASS END=152325435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:26,0 chr1 152325436 . G . PASS END=152325443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 152325444 . A . PASS END=152325447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,889:0,67,255:26,0 chr1 152325448 . T . PASS END=152325448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:25,0 chr1 152325449 . G . PASS END=152325453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 152325454 . C . PASS END=152325454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:24,0 chr1 152325455 . C . PASS END=152325455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 152325456 . G . PASS END=152325457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152325458 . C . PASS END=152325459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 152325460 . T . PASS END=152325460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,828:0,9,255:23,0 chr1 152325461 . G . PASS END=152325461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152325462 . G . PASS END=152325463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:25,0 chr1 152325464 . C . PASS END=152325465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152325466 . T . PASS END=152325470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,879:0,67,255:26,0 chr1 152325471 . G . PASS END=152325471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr1 152325472 . T . PASS END=152325499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,64,255:25,0 chr1 152325500 . C . PASS END=152325507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,767:0,50,255:19,0 chr1 152325508 . T . PASS END=152325508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 152325509 . G . PASS END=152325509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 152325510 . C . PASS END=152325510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 152325511 . A . PASS END=152325511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152325512 . C . PASS END=152325512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 152325513 . T . PASS END=152325518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,847:0,69,255:23,0 chr1 152325519 . G . PASS END=152325520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 152325521 . C . PASS END=152325522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 152325523 . G . PASS END=152325523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:19,0 chr1 152325524 . T . PASS END=152325532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 152325533 . T . PASS END=152325534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 152325535 . T . PASS END=152325535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:19,0 chr1 152325536 . G . PASS END=152325536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,829:0,41,255:21,0 chr1 152325537 . G . PASS END=152325537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152325538 . C . PASS END=152325538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 152325539 . T . PASS END=152325539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 152325540 . A . PASS END=152325540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152325541 . G . PASS END=152325542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr1 152325543 . T . PASS END=152325543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,743:0,17,255:21,0 chr1 152325544 . C . PASS END=152325544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 152325545 . T . PASS END=152325545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:21,0 chr1 152325546 . C . PASS END=152325546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 152325547 . T . PASS END=152325547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:11:24:0,11,731:0,11,255:21,0 chr1 152325548 . G . PASS END=152325549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,775:0,55,255:22,0 chr1 152325550 . C . PASS END=152325550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152325551 . T . PASS END=152325555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr1 152325556 . G . PASS END=152325556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:20,0 chr1 152325557 . T . PASS END=152325558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:18,0 chr1 152325559 . G . PASS END=152325559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 152325560 . T . PASS END=152325560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr1 152325561 . C . PASS END=152325564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:24:0,44,853:0,44,255:20,0 chr1 152325565 . G . PASS END=152325566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:18,0 chr1 152325567 . C . PASS END=152325567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 152325568 . C . PASS END=152325569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,748:0,33,255:20,0 chr1 152325570 . T . PASS END=152325570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:20,0 chr1 152325571 . G . PASS END=152325571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152325572 . T . PASS END=152325573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 152325574 . T . PASS END=152325575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,721:0,24,255:20,0 chr1 152325576 . T . PASS END=152325576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 152325577 . G . PASS END=152325577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 152325578 . T . PASS END=152325578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 152325579 . G . PASS END=152325579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 152325580 . G . PASS END=152325580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 152325581 . T . PASS END=152325581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,566:0,16,255:19,0 chr1 152325582 . T . PASS END=152325583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:33:22:0,33,660:0,33,255:20,0 chr1 152325584 . G . PASS END=152325585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152325586 . T . PASS END=152325586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,696:0,19,255:19,0 chr1 152325587 . C . PASS END=152325587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 152325588 . A . PASS END=152325591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152325592 . C . PASS END=152325592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:21,0 chr1 152325593 . C . PASS END=152325593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:21,0 chr1 152325594 . A . PASS END=152325594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152325595 . G . PASS END=152325595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1094:0,49,255:29,0 chr1 152325596 . A . PASS END=152325598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:30,0 chr1 152325599 . A . PASS END=152325599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 152325600 . G . PASS END=152325628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:34:0,86,1202:0,86,255:36,0 chr1 152325629 . C . PASS END=152325629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:33,0 chr1 152325630 . A . PASS END=152325644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1224:0,94,255:37,0 chr1 152325645 . T . PASS END=152325645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:36,0 chr1 152325646 . C . PASS END=152325647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 152325648 . G . PASS END=152325648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1213:0,64,255:32,0 chr1 152325649 . T . PASS END=152325656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1341:0,95,255:36,0 chr1 152325657 . T . PASS END=152325657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:35,0 chr1 152325658 . A . PASS END=152325659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1357:0,95,255:36,0 chr1 152325660 . G . PASS END=152325661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:64:37:0,64,1257:0,64,255:36,0 chr1 152325662 . A . PASS END=152325682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1266:0,84,255:38,0 chr1 152325683 . A . PASS END=152325683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1168:0,75,255:36,0 chr1 152325684 . T . PASS END=152325694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,104,1398:0,104,255:40,0 chr1 152325695 . C . PASS END=152325731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:41:0,111,1665:0,123,255:40,0 chr1 152325732 . G A,C, 50.00 PASS DP=49;MQ=216.58;MQRankSum=-0.955;ReadPosRankSum=3.206;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,26,1,0:0.531,0.020,0.000:49:11,15,1,0:11,11,0,0:48:85,0,49,865,751,836,901,787,1652,1688:255,0,255:18,0:5.0000e+01,6.8081e-05,5.2479e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:15,7,17,10:10,12,12,15 chr1 152325733 . T . PASS END=152325769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:46:0,101,1665:0,101,255:40,0 chr1 152325770 . C . PASS END=152325816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,108,1558:0,108,255:40,0 chr1 152325817 . T . PASS END=152325817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1644:0,78,255:40,0 chr1 152325818 . G . PASS END=152325820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,150,255:40,0 chr1 152325821 . A . PASS END=152325821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:79:54:0,79,1749:0,79,255:40,0 chr1 152325822 . G . PASS END=152325920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,103,1622:0,103,255:40,0 chr1 152325921 . A . PASS END=152325921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,5:55:68:55:0,68,1781:0,68,255:40,0 chr1 152325922 . T . PASS END=152325925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,148,255:40,0 chr1 152325926 . T . PASS END=152325926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:78:54:0,78,1277:0,78,255:40,0 chr1 152325927 . T . PASS END=152326309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1191:0,81,255:40,0 chr1 152326310 . T . PASS END=152326310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:42:40:0,42,1332:0,42,255:35,0 chr1 152326311 . C . PASS END=152326846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:35:0,82,1280:0,82,255:40,1 chr1 152326847 . A . PASS END=152326847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1476:0,77,255:40,0 chr1 152326848 . G . PASS END=152327328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1260:0,85,255:40,0 chr1 152327329 . T . PASS END=152327329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:29,0 chr1 152327330 . C . PASS END=152327344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 152327345 . C . PASS END=152327351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,77,255:25,0 chr1 152327352 . C . PASS END=152327352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:25,0 chr1 152327353 . T . PASS END=152327364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:27:0,61,984:0,61,255:26,0 chr1 152327365 . G . PASS END=152327386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:32,0 chr1 152327387 . A . PASS END=152327387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:29,0 chr1 152327388 . G . PASS END=152327393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 152327394 . A . PASS END=152327400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152327401 . C . PASS END=152327401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 152327402 . C . PASS END=152327404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1039:0,71,255:26,0 chr1 152327405 . A . PASS END=152327419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:32,0 chr1 152327420 . A . PASS END=152327420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1170:0,50,255:32,0 chr1 152327421 . T . PASS END=152327423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:33,0 chr1 152327424 . A . PASS END=152327424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 152327425 . A . PASS END=152327425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1197:0,88,255:31,0 chr1 152327426 . A . PASS END=152327426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1064:0,69,255:30,0 chr1 152327427 . A . PASS END=152327431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1278:0,89,255:33,0 chr1 152327432 . G . PASS END=152327441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1238:0,89,255:35,0 chr1 152327442 . T . PASS END=152327442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1127:0,50,255:32,0 chr1 152327443 . G . PASS END=152327445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 152327446 . C . PASS END=152327446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:32,0 chr1 152327447 . C . PASS END=152327450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,102,1530:0,105,255:36,0 chr1 152327451 . T . PASS END=152327451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1150:0,78,255:34,0 chr1 152327452 . T . PASS END=152327459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,101,1382:0,101,255:39,0 chr1 152327460 . G . PASS END=152327460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,0 chr1 152327461 . C . PASS END=152327468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1457:0,104,255:38,0 chr1 152327469 . C T, 45.76 PASS DP=36;MQ=113.62;MQRankSum=-4.950;ReadPosRankSum=3.427;FractionInformativeReads=0.972;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,16,0:0.457,0.000:35:11,7,0:8,9,0:45:81,0,49,527,671,1199:255,0,255:21,0:4.5756e+01,1.4186e-04,5.2150e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,6,5,11:9,10,8,8:152327469 chr1 152327470 . T . PASS END=152327490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1293:0,84,255:38,0 chr1 152327491 . T . PASS END=152327491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:29,0 chr1 152327492 . G . PASS END=152327496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:31,0 chr1 152327497 . T . PASS END=152327497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:31,0 chr1 152327498 . A . PASS END=152327501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:36,0 chr1 152327502 . A G, 41.63 PASS DP=34;MQ=112.52;MQRankSum=-4.771;ReadPosRankSum=-1.824;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:20,13,0:0.394,0.000:33:11,4,0:9,9,0:41:76,0,48,447,699,1146:255,0,255:22,0:4.1626e+01,3.3135e-04,5.1250e+01,4.4853e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,5,8:9,11,6,7:152327469 chr1 152327503 . G . PASS END=152327503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:33:37:0,33,1190:0,33,255:34,0 chr1 152327504 . A . PASS END=152327504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:33,0 chr1 152327505 . C . PASS END=152327505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:34,0 chr1 152327506 . T . PASS END=152327508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1290:0,80,255:36,0 chr1 152327509 . T . PASS END=152327509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr1 152327510 . G . PASS END=152327520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:36:0,80,1260:0,80,255:31,0 chr1 152327521 . T . PASS END=152327524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1015:0,60,255:27,0 chr1 152327525 . G . PASS END=152327525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 152327526 . T C, 0.30 DRAGENSnpHardQUAL DP=27;MQ=133.87;MQRankSum=-3.464;ReadPosRankSum=-1.280;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:22,5,0:0.185,0.000:27:13,1,0:9,4,0:12:23,0,50,150,742,892:115,0,255:22,0:3.0020e-01,1.1753e+01,6.4753e+01,1.6173e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,1,4:15,7,3,2:152327469 chr1 152327527 . T . PASS END=152327527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr1 152327528 . G . PASS END=152327529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152327530 . C . PASS END=152327530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:27,0 chr1 152327531 . C . PASS END=152327533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr1 152327534 . A . PASS END=152327534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:25,0 chr1 152327535 . A G, 0.14 DRAGENSnpHardQUAL DP=25;MQ=138.58;MQRankSum=-3.150;ReadPosRankSum=-1.964;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:21,4,0:0.160,0.000:25:12,1,0:9,3,0:15:20,0,47,147,147,147:104,0,255:21,0:1.3510e-01,1.5139e+01,6.5139e+01,1.6213e+02,1.9690e+02,1.6514e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,12,0,4:12,9,3,1:152327469 chr1 152327536 . C . PASS END=152327537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152327538 . A . PASS END=152327539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 152327540 . A . PASS END=152327540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:25,0 chr1 152327541 . G . PASS END=152327541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 152327542 . T G, 0.14 DRAGENSnpHardQUAL DP=28;MQ=143.32;MQRankSum=-3.184;ReadPosRankSum=-1.477;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:24,4,0:0.143,0.000:28:13,1,0:11,3,0:15:20,0,47,147,147,147:93,0,255:24,0:1.3510e-01,1.5139e+01,6.5139e+01,1.6213e+02,1.9690e+02,1.6514e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,13,0,4:14,10,3,1:152327469 chr1 152327543 . A . PASS END=152327543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152327544 . T . PASS END=152327545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1045:0,60,255:25,0 chr1 152327546 . G . PASS END=152327546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:27,0 chr1 152327547 . T . PASS END=152327554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1149:0,82,255:29,0 chr1 152327555 . C . PASS END=152327555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:25,0 chr1 152327556 . A . PASS END=152327556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,994:0,24,255:25,0 chr1 152327557 . G . PASS END=152327557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 152327558 . T . LowGQ END=152327558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:0:33:0,0,902:4,0,255:27,0 chr1 152327559 . C . PASS END=152327574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1178:0,83,255:31,0 chr1 152327575 . C . PASS END=152327577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 152327578 . C . PASS END=152327579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1050:0,63,255:27,0 chr1 152327580 . G . PASS END=152327602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 152327603 . G . PASS END=152327603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1053:0,38,255:26,0 chr1 152327604 . T . PASS END=152327609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 152327610 . A . PASS END=152327610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 152327611 . A . PASS END=152327611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 152327612 . A . PASS END=152327612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 152327613 . G . PASS END=152327613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 152327614 . C . PASS END=152327614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 152327615 . C . PASS END=152327615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 152327616 . A . PASS END=152327624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1033:0,87,255:32,0 chr1 152327625 . A . PASS END=152327625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1186:0,28,255:31,0 chr1 152327626 . C . PASS END=152327631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1247:0,89,255:33,0 chr1 152327632 . C . PASS END=152327632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:31,0 chr1 152327633 . T . LowGQ END=152327633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:35:0,0,1000:28,0,255:28,0 chr1 152327634 . T . PASS END=152327648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:35:0,93,1440:0,93,255:39,0 chr1 152327649 . A . PASS END=152327649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1355:0,71,255:36,0 chr1 152327650 . A . PASS END=152327651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,101,1425:0,101,255:37,0 chr1 152327652 . G T, 11.71 PASS DP=36;MQ=155.09;MQRankSum=-4.077;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,7,0:0.194,0.000:36:16,6,0:13,1,0:12:46,0,47,147,147,147:163,0,255:30,0:1.1712e+01,3.0322e-01,5.0303e+01,1.4729e+02,1.8206e+02,1.5030e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,13,6,1:21,8,5,2 chr1 152327653 . C . PASS END=152327655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1394:0,101,255:37,0 chr1 152327656 . G A, 11.71 PASS DP=36;MQ=155.09;MQRankSum=-4.077;ReadPosRankSum=0.240;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,7,0:0.194,0.000:36:16,6,0:13,1,0:12:46,0,47,147,147,147:185,0,255:30,0:1.1712e+01,3.0322e-01,5.0303e+01,1.4729e+02,1.8206e+02,1.5030e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,13,6,1:21,8,5,2 chr1 152327657 . A . PASS END=152327657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1295:0,62,255:36,0 chr1 152327658 . T A, 11.71 PASS DP=36;MQ=155.09;MQRankSum=-4.077;ReadPosRankSum=0.320;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,7,0:0.194,0.000:36:16,6,0:13,1,0:12:46,0,47,147,147,147:149,0,255:30,0:1.1712e+01,3.0322e-01,5.0303e+01,1.4729e+02,1.8206e+02,1.5030e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,13,6,1:21,8,5,2 chr1 152327659 . G . PASS END=152327666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1333:0,84,255:38,0 chr1 152327667 . C T, 19.96 PASS DP=37;MQ=147.93;MQRankSum=-3.855;ReadPosRankSum=4.261;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,8,0:0.216,0.000:37:15,7,0:14,1,0:20:55,0,50,286,1029,1315:255,0,255:27,0:1.9957e+01,4.4106e-02,5.3044e+01,2.8613e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,7,1:16,13,6,2 chr1 152327668 . G . PASS END=152327706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:82:39:0,82,1364:0,82,255:40,0 chr1 152327707 . G . PASS END=152328192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:85:41:0,85,1510:0,85,255:40,0 chr1 152328193 . T . PASS END=152328193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:37,0 chr1 152328194 . G . PASS END=152328194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 152328195 . A . PASS END=152328195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1481:0,79,255:38,0 chr1 152328196 . C . PASS END=152328213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:42:0,105,1529:0,107,255:40,0 chr1 152328214 . T . PASS END=152328214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:37,0 chr1 152328215 . G . PASS END=152328342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:37:0,81,1349:0,81,255:40,0 chr1 152328343 . G . PASS END=152328343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:32,0 chr1 152328344 . A . PASS END=152328350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,97,255:34,0 chr1 152328351 . T . PASS END=152328351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1303:0,76,255:33,0 chr1 152328352 . C . PASS END=152328361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:85:35:0,85,1235:0,85,255:35,0 chr1 152328362 . G . PASS END=152328363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1075:0,74,255:30,0 chr1 152328364 . T . PASS END=152328364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 152328365 . G . PASS END=152328365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:28,0 chr1 152328366 . G . PASS END=152328373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,83,255:29,0 chr1 152328374 . C . PASS END=152328378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 152328379 . G . PASS END=152328380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 152328381 . C . PASS END=152328381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:26,0 chr1 152328382 . T . PASS END=152328397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1097:0,80,255:31,0 chr1 152328398 . T . PASS END=152328398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 152328399 . G . PASS END=152328399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1200:0,83,255:28,0 chr1 152328400 . T . PASS END=152328400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:27,0 chr1 152328401 . G . PASS END=152328403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1082:0,82,255:29,0 chr1 152328404 . G . PASS END=152328404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr1 152328405 . G . PASS END=152328405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1008:0,38,255:27,0 chr1 152328406 . C . PASS END=152328408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:29:0,63,1116:0,63,255:26,0 chr1 152328409 . T . PASS END=152328410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 152328411 . A G, 31.12 PASS DP=32;MQ=82.51;MQRankSum=-1.215;ReadPosRankSum=1.802;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,9,0:0.281,0.000:32:11,6,0:12,3,0:31:66,0,47,293,807,1100:255,0,255:22,0:3.1121e+01,3.3976e-03,5.0253e+01,2.9313e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,5,4:7,16,6,3 chr1 152328412 . C . PASS END=152328412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:30,0 chr1 152328413 . T . PASS END=152328413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:30,0 chr1 152328414 . A . PASS END=152328414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 152328415 . G . PASS END=152328415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr1 152328416 . A . PASS END=152328417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 152328418 . T . PASS END=152328419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1186:0,61,255:32,0 chr1 152328420 . A . PASS END=152328421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1180:0,83,255:32,0 chr1 152328422 . C . PASS END=152328422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 152328423 . T . PASS END=152328423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 152328424 . G . PASS END=152328424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:33,0 chr1 152328425 . A . PASS END=152328429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1294:0,92,255:34,0 chr1 152328430 . G . PASS END=152328430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:34,0 chr1 152328431 . A . PASS END=152328436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1321:0,95,255:37,0 chr1 152328437 . G . PASS END=152328437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:36,0 chr1 152328438 . T . PASS END=152328445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:37:0,83,1315:0,83,255:38,0 chr1 152328446 . A . PASS END=152328446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 152328447 . G . PASS END=152328447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:31:40:0,31,1218:0,31,255:36,0 chr1 152328448 . C . PASS END=152328448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1449:0,104,255:39,0 chr1 152328449 . C . PASS END=152328471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:40:0,87,1421:0,87,255:40,0 chr1 152328472 . C . PASS END=152328472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:37,0 chr1 152328473 . C . PASS END=152328506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:91:42:0,91,1490:0,91,255:40,0 chr1 152328507 . C . PASS END=152328507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:47:45:0,47,1447:0,47,255:39,0 chr1 152328508 . G . PASS END=152328635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:31:0,80,1109:0,80,255:40,0 chr1 152328636 . G . PASS END=152328638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 152328639 . A . PASS END=152328646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 152328647 . G . PASS END=152328647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr1 152328648 . T . PASS END=152328648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 152328649 . G . PASS END=152328651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,903:0,45,255:25,0 chr1 152328652 . C . PASS END=152328657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1030:0,68,255:26,0 chr1 152328658 . T . PASS END=152328658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:26,0 chr1 152328659 . C . PASS END=152328665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 152328666 . T . PASS END=152328666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 152328667 . C . PASS END=152328667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152328668 . C . PASS END=152328668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 152328669 . A . PASS END=152328670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 152328671 . A . PASS END=152328671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:25,0 chr1 152328672 . A . PASS END=152328676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 152328677 . A . PASS END=152328678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,894:0,42,255:25,0 chr1 152328679 . G . PASS END=152328684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,954:0,65,255:26,0 chr1 152328685 . C . PASS END=152328685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152328686 . C . PASS END=152328688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 152328689 . A . PASS END=152328689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 152328690 . G . PASS END=152328692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,885:0,42,255:26,0 chr1 152328693 . A . PASS END=152328693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:24,0 chr1 152328694 . G . PASS END=152328694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 152328695 . A . PASS END=152328695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 152328696 . C . PASS END=152328696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 152328697 . C . PASS END=152328699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:28,0 chr1 152328700 . T . PASS END=152328700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr1 152328701 . G . PASS END=152328703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1076:0,60,255:27,0 chr1 152328704 . G . PASS END=152328706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:29,0 chr1 152328707 . C . PASS END=152328707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:29,1 chr1 152328708 . A . PASS END=152328708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:37:34:0,37,1167:0,37,255:30,1 chr1 152328709 . A . PASS END=152328709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:32,0 chr1 152328710 . A . PASS END=152328710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1209:0,86,255:31,0 chr1 152328711 . A . PASS END=152328711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:30,0 chr1 152328712 . C . PASS END=152328729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,86,255:32,0 chr1 152328730 . A . PASS END=152328730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:26,0 chr1 152328731 . C . PASS END=152328731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152328732 . A . PASS END=152328732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 152328733 . G . PASS END=152328733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152328734 . A . PASS END=152328734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152328735 . C . PASS END=152328736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152328737 . C . PASS END=152328737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 152328738 . A . PASS END=152328740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152328741 . C . PASS END=152328741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr1 152328742 . T . PASS END=152328747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 152328748 . A . PASS END=152328748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 152328749 . A . PASS END=152328881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:31:0,83,1156:0,83,255:40,0 chr1 152328882 . T . PASS END=152328882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1845:0,79,255:40,0 chr1 152328883 . G . PASS END=152329145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:44:0,91,1563:0,91,255:40,0 chr1 152329146 . T . PASS END=152329146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:35,0 chr1 152329147 . G . PASS END=152329167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:38:0,88,1528:0,88,255:40,0 chr1 152329168 . T . PASS END=152329168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr1 152329169 . T . PASS END=152329173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:35,0 chr1 152329174 . G . PASS END=152329174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr1 152329175 . G . PASS END=152329199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1263:0,92,255:36,0 chr1 152329200 . T . PASS END=152329200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:34,0 chr1 152329201 . C . PASS END=152329202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:35,0 chr1 152329203 . T . PASS END=152329203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1116:0,53,255:33,0 chr1 152329204 . C . PASS END=152329204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 152329205 . T . PASS END=152329205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1196:0,53,255:33,0 chr1 152329206 . C . PASS END=152329397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:36:0,96,1413:0,104,255:40,0 chr1 152329398 . A . PASS END=152329434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:62:0,120,1800:0,175,255:40,0 chr1 152329435 . C T, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.838;ReadPosRankSum=4.909;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,35,0:0.547,0.000:64:15,19,0:14,16,0:48:85,0,49,1215,1029,2244:255,0,255:29,0:5.0000e+01,6.9116e-05,5.2285e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,15,20:12,17,15,20 chr1 152329436 . G . PASS END=152329472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:65:0,120,1800:0,168,255:40,0 chr1 152329473 . A . PASS END=152330123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:85:40:0,85,1383:0,85,255:40,2 chr1 152331223 . C . PASS END=152331239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1458:0,107,255:40,0 chr1 152331240 . G A, 50.00 PASS DP=42;MQ=248.56;MQRankSum=4.960;ReadPosRankSum=1.593;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,26,0:0.619,0.000:42:11,18,0:5,8,0:46:85,0,45,930,572,1502:255,0,255:16,0:5.0000e+01,1.1183e-04,4.8032e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,2,17,9:11,5,15,11 chr1 152331241 . C . PASS END=152331277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,114,1529:0,115,255:40,0 chr1 152331278 . A . PASS END=152331360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:37:0,101,1449:0,101,255:40,0 chr1 152382070 . T . PASS END=152382082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,721:0,57,255:19,0 chr1 152382083 . C . PASS END=152382086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 152382087 . T . PASS END=152382088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 152382089 . A . PASS END=152382105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:24,0 chr1 152382106 . T . PASS END=152382106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,744:0,55,255:23,0 chr1 152382107 . C . PASS END=152382112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:26,0 chr1 152382113 . G . PASS END=152382117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 152382118 . G . PASS END=152382119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152382120 . C T, 43.58 PASS DP=27;MQ=250.00;MQRankSum=4.140;ReadPosRankSum=2.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,9,0:0.333,0.000:27:7,2,0:11,7,0:43:78,0,50,322,615,937:252,0,255:18,0:4.3583e+01,2.1201e-04,5.3000e+01,3.2185e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,6,3:14,4,5,4 chr1 152382121 . T . PASS END=152382123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152382124 . C . PASS END=152382130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152382131 . T . PASS END=152382131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 152382132 . C . PASS END=152382148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 152382149 . T . PASS END=152382150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152382151 . G . PASS END=152382153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 152382154 . C . PASS END=152382157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,77,255:26,0 chr1 152382158 . G . PASS END=152382160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 152382161 . G . PASS END=152382163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152382164 . G . PASS END=152382165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 152382166 . A . PASS END=152382243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1041:0,84,255:33,0 chr1 152382244 . A . PASS END=152382245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1004:0,66,255:28,0 chr1 152382246 . C . PASS END=152382305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:32,0 chr1 152382306 . T . PASS END=152382306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 152382307 . C . PASS END=152383027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:29:0,81,1215:0,82,255:40,0 chr1 152383028 . T . PASS END=152383028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:26,0 chr1 152383029 . C . PASS END=152383040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 152383041 . A . PASS END=152383078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,71,255:25,0 chr1 152383079 . C . PASS END=152383080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152383081 . A . PASS END=152383081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 152383082 . G . PASS END=152383082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 152383083 . T . PASS END=152383084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152383085 . G . PASS END=152383096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 152383097 . G . PASS END=152383097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 152383098 . T . PASS END=152383098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,865:0,67,255:27,0 chr1 152383099 . C . PASS END=152383102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 152383103 . A . PASS END=152383103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr1 152383104 . C . PASS END=152383112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1019:0,87,255:29,0 chr1 152383113 . T . PASS END=152383113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 152383114 . G . PASS END=152383118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:29,0 chr1 152383119 . G . PASS END=152383143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,969:0,65,255:30,0 chr1 152383144 . T . PASS END=152383150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152383151 . C . PASS END=152383151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 152383152 . T . PASS END=152383153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1109:0,87,255:30,0 chr1 152383154 . C . PASS END=152383154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 152383155 . T . PASS END=152383156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1163:0,90,255:30,0 chr1 152383157 . C . PASS END=152383159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152383160 . T . PASS END=152383180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:29,0 chr1 152383181 . G . PASS END=152383181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:26,0 chr1 152383182 . C . PASS END=152383187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 152383188 . C . PASS END=152383205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 152383206 . T . PASS END=152383206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 152383207 . C . PASS END=152383235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr1 152383236 . C . PASS END=152383247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 152383248 . T . PASS END=152383282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 152383283 . C . PASS END=152383294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 152383295 . G . PASS END=152383297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 152383298 . T . PASS END=152383299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 152383300 . G . PASS END=152383304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152383305 . A . PASS END=152383305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 152383306 . G . PASS END=152383308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152383309 . C . PASS END=152383311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 152383312 . G . PASS END=152383312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:17,0 chr1 152383313 . G . PASS END=152383321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,690:0,46,255:19,0 chr1 152383322 . A . PASS END=152383348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,780:0,69,255:23,0 chr1 152383349 . T . PASS END=152383349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 152383350 . C . PASS END=152383351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152383352 . A . PASS END=152383352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 152383353 . C . PASS END=152383358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 152383359 . C . PASS END=152383360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152383361 . G . PASS END=152383365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 152383366 . G . PASS END=152383366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 152383367 . T . PASS END=152383369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 152383370 . T . PASS END=152383370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:22,0 chr1 152383371 . C . PASS END=152383373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 152383374 . C . PASS END=152383374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 152383375 . C . PASS END=152383375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 152383376 . A . PASS END=152383376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 152383377 . G . PASS END=152383383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 152383384 . C . PASS END=152383384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:21,0 chr1 152383385 . A . PASS END=152383385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 152383386 . G . PASS END=152383386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 152383387 . G . PASS END=152383390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 152383391 . T . PASS END=152383391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 152383392 . C . PASS END=152383398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152383399 . A . PASS END=152383399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 152383400 . G . PASS END=152383412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,748:0,66,255:22,0 chr1 152383413 . G . PASS END=152383419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,767:0,50,255:19,0 chr1 152384572 . C . PASS END=152384572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 152384573 . A . PASS END=152384573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 152384574 . C . PASS END=152384577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 152384578 . C . PASS END=152384578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 152384579 . A . PASS END=152384588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr1 152384589 . A . PASS END=152384589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,820:0,34,255:27,0 chr1 152384590 . C . PASS END=152384607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1062:0,90,255:30,0 chr1 152384608 . T . PASS END=152384608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 152384609 . T . PASS END=152384648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1119:0,83,255:32,0 chr1 152384649 . T . PASS END=152384649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 152384650 . C . PASS END=152384651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 152384652 . T . PASS END=152384652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 152384653 . T . PASS END=152384665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152384666 . A . PASS END=152384683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,906:0,62,255:26,0 chr1 152384684 . T . PASS END=152384685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr1 152384686 . A . PASS END=152384686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152384687 . A . PASS END=152384687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:21,0 chr1 152384688 . T . PASS END=152384691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 152384692 . T . PASS END=152384709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:20:0,43,658:0,43,255:19,0 chr1 152484011 . A . PASS END=152484011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 152484012 . T . PASS END=152484037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:19,0 chr1 152484038 . T . PASS END=152484040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152484041 . C . PASS END=152484041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 152484042 . A . PASS END=152484054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:24,0 chr1 152484055 . A . PASS END=152484056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,845:0,44,255:23,0 chr1 152484057 . G . PASS END=152484068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,856:0,75,255:25,0 chr1 152484069 . G . PASS END=152484069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 152484070 . C . PASS END=152484087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr1 152484088 . T . PASS END=152484089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 152484090 . A . PASS END=152484091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 152484092 . T . PASS END=152484093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 152484094 . T . PASS END=152484094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr1 152484095 . C . PASS END=152484095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152484096 . C . PASS END=152484096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 152484097 . T . PASS END=152484128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr1 152484129 . G A, 50.00 PASS DP=26;MQ=245.59;MQRankSum=2.308;ReadPosRankSum=0.974;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:3,6,0:10,7,0:48:85,0,50,456,436,892:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,2,2,11:5,8,9,4 chr1 152484130 . T . PASS END=152484138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,914:0,72,255:26,0 chr1 152484139 . A . PASS END=152484139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152484140 . T . PASS END=152484151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,939:0,67,255:26,0 chr1 152484152 . G . PASS END=152484154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152484155 . T . PASS END=152484155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:28,0 chr1 152484156 . C . PASS END=152484157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 152484158 . T . PASS END=152484158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:26,0 chr1 152484159 . C . PASS END=152484161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152484162 . G . PASS END=152484162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 152484163 . C . PASS END=152484166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152484167 . G . PASS END=152484173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152484174 . G . PASS END=152484174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 152484175 . C . PASS END=152484175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152484176 . T . PASS END=152484176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 152484177 . C . PASS END=152484184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 152484185 . T . PASS END=152484186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 152484187 . C . PASS END=152484188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152484189 . G . PASS END=152484189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 152484190 . C . PASS END=152484190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152484191 . A . PASS END=152484191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr1 152484192 . G . PASS END=152484193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152484194 . T . PASS END=152484194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,857:0,56,255:26,0 chr1 152484195 . C . PASS END=152484195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152484196 . T . PASS END=152484196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 152484197 . G . PASS END=152484197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152484198 . A . PASS END=152484200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 152484201 . G . PASS END=152484204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152484205 . T . PASS END=152484206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 152484207 . G . PASS END=152484209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152484210 . G . PASS END=152484228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 152484229 . G . PASS END=152484268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 152484269 . T . PASS END=152484280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 152484281 . G . PASS END=152484290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 152484291 . A . PASS END=152484291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:7,0 chr1 152484292 . G . PASS END=152484318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 152484319 . C . PASS END=152484327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 152484328 . G . PASS END=152484331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:7,0 chr1 152484332 . T . PASS END=152484336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 152484337 . C . PASS END=152484337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152484338 . T . PASS END=152484350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 152484351 . C . PASS END=152484367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 152487860 . A . PASS END=152487863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 152487864 . C . PASS END=152487907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,474:0,42,255:15,0 chr1 152487908 . T . PASS END=152487908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 152487909 . C . PASS END=152487917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 152487918 . G . PASS END=152487920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr1 152487921 . C . PASS END=152487922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152487923 . G . PASS END=152487923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr1 152487924 . C . PASS END=152487927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152487928 . G . PASS END=152487928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 152487929 . T . PASS END=152487941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 152487942 . C . PASS END=152487942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 152487943 . G . PASS END=152487961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 152487962 . T . PASS END=152487962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 152487963 . C . PASS END=152487978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr1 152487979 . C T, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.200;ReadPosRankSum=1.356;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,10,0:0.625,0.000:16:2,4,0:4,6,0:47:85,0,48,320,214,535:255,0,185:6,0:5.0000e+01,7.7917e-05,5.0988e+01,3.2041e+02,2.4926e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,7,3:4,2,7,3 chr1 152487980 . G . PASS END=152487981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,659:0,48,255:17,0 chr1 152487982 . C . PASS END=152487982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr1 152487983 . T . PASS END=152487984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 152487985 . C . PASS END=152487985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:13,0 chr1 152487986 . G . PASS END=152488008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:19,0 chr1 152488009 . A . PASS END=152488011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 152488012 . C . PASS END=152488012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 152488013 . T . PASS END=152488013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:13,0 chr1 152488014 . G . PASS END=152488014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 152488015 . C . PASS END=152488015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 152488016 . T . PASS END=152488016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 152488017 . G . PASS END=152488017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 152488018 . C . PASS END=152488018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 152488019 . G . PASS END=152488019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,482:0,17,255:13,0 chr1 152488020 . G . PASS END=152488025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr1 152488026 . G . PASS END=152488026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:13,0 chr1 152488027 . C . PASS END=152488027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 152488028 . T . PASS END=152488028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 152488029 . C . PASS END=152488030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152488031 . A . PASS END=152488031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr1 152488032 . C . PASS END=152488033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152488034 . A . LowGQ END=152488036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,404:0,0,255:14,0 chr1 152488037 . T . PASS END=152488038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 152488039 . C . PASS END=152488039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152488040 . T . PASS END=152488041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr1 152488042 . C . PASS END=152488042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152488043 . T . PASS END=152488043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 152488044 . G . PASS END=152488044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr1 152488045 . C . PASS END=152488051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 152488052 . A . PASS END=152488062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 152488063 . C T, 50.00 PASS DP=14;MQ=250.00;MQRankSum=2.933;ReadPosRankSum=1.067;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,9,0:0.643,0.000:14:2,2,0:3,7,0:47:85,0,47,321,179,499:255,0,152:5,0:5.0000e+01,8.2318e-05,5.0484e+01,3.2067e+02,2.1355e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,5,4:2,3,6,3 chr1 152488064 . C . PASS END=152488075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr1 152488076 . A . PASS END=152488076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 152488077 . G . PASS END=152488087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 152488088 . T . PASS END=152488090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 152488091 . T . PASS END=152488091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 152488092 . G . PASS END=152488094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 152488095 . G . PASS END=152488095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 152488096 . G . PASS END=152488100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 152488101 . G . PASS END=152488101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152488102 . C . PASS END=152488123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:14,0 chr1 152488124 . A . PASS END=152488131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 152488132 . G . PASS END=152488134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 152488135 . C . PASS END=152488135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 152488136 . T . PASS END=152488137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:25:14:0,25,405:0,25,255:9,0 chr1 152488138 . A . PASS END=152488138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:9,0 chr1 152488139 . G . PASS END=152488143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:11:0,27,405:0,33,255:9,0 chr1 152488144 . C . PASS END=152488145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152488146 . G . PASS END=152488146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 152488147 . C . PASS END=152488152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 152488153 . C . PASS END=152488159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 152538406 . T . PASS END=152538407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 152538408 . A . PASS END=152538408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 152538409 . G . PASS END=152538425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:17,0 chr1 152538426 . C . PASS END=152538426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 152538427 . G . PASS END=152538427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:15,0 chr1 152538428 . T . PASS END=152538434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 152538435 . A . PASS END=152538435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 152538436 . G . PASS END=152538440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 152538441 . A . PASS END=152538441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 152538442 . G . PASS END=152538460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,690:0,54,255:18,0 chr1 152538461 . C . PASS END=152538465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 152538466 . C . PASS END=152538513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 152538514 . G . PASS END=152538514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 152538515 . T . PASS END=152538546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:17,0 chr1 152538547 . A . PASS END=152538547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 152538548 . G . PASS END=152538562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 152538563 . G . PASS END=152538564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152538565 . G . PASS END=152538568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152538569 . G . PASS END=152538574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 152538575 . C . PASS END=152538575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 152538576 . A . PASS END=152538586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 152538587 . G . PASS END=152538587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152538588 . C . PASS END=152538597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 152538598 . A . PASS END=152538623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 152538624 . A . PASS END=152538628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152538629 . G . PASS END=152538632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 152538633 . A . PASS END=152538647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 152538648 . G . PASS END=152538657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 152538658 . C . PASS END=152538659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 152538660 . G . PASS END=152538660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 152538661 . C . PASS END=152538674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 152538675 . G . PASS END=152538678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 152538679 . G . PASS END=152538684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:14:10:0,14,270:0,14,255:7,0 chr1 152552134 . T . PASS END=152552141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr1 152552142 . A . PASS END=152552142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 152552143 . G . PASS END=152552152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr1 152552153 . C . PASS END=152552155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 152552156 . T . PASS END=152552156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 152552157 . G . PASS END=152552167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 152552168 . G . PASS END=152552168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 152552169 . A . PASS END=152552169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 152552170 . G . PASS END=152552179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152552180 . T . PASS END=152552180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,408:0,9,255:11,0 chr1 152552181 . G . PASS END=152552183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 152552184 . G . PASS END=152552184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152552185 . A . PASS END=152552190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152552191 . G . PASS END=152552191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 152552192 . C . PASS END=152552192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152552193 . C . PASS END=152552194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 152552195 . C . PASS END=152552201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 152552202 . A . PASS END=152552203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 152552204 . G . PASS END=152552220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr1 152552221 . C . PASS END=152552221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 152552222 . C . PASS END=152552237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 152552238 . G . PASS END=152552238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 152552239 . C . PASS END=152552285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,458:0,39,255:13,0 chr1 152552286 . C . PASS END=152552290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152552291 . G . PASS END=152552293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:12,0 chr1 152552294 . C . PASS END=152552294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152552295 . T . PASS END=152552295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 152552296 . T . PASS END=152552336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:17,0 chr1 152552337 . G . PASS END=152552337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 152552338 . G . PASS END=152552379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,546:0,51,255:19,0 chr1 152552380 . T . PASS END=152552380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,463:0,37,255:16,0 chr1 152552381 . T . PASS END=152552407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,599:0,51,255:17,0 chr1 152552408 . G . PASS END=152552412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 152573208 . A . PASS END=152573242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 152573243 . C . PASS END=152573243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 152573244 . C . PASS END=152573245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152573246 . T . PASS END=152573290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 152573291 . G . PASS END=152573298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 152573299 . C . PASS END=152573305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152573306 . C . PASS END=152573308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:17,0 chr1 152573309 . T . PASS END=152573309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 152573310 . T . PASS END=152573325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr1 152573326 . G . PASS END=152573332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152573333 . G . PASS END=152573344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 152573345 . C . PASS END=152573353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 152573354 . A . PASS END=152573354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 152573355 . A . PASS END=152573411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:23,0 chr1 152573412 . A . PASS END=152573412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152573413 . G . PASS END=152573414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152573415 . T . PASS END=152573415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 152573416 . C . PASS END=152573423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 152573424 . T . PASS END=152573424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 152573425 . G . PASS END=152573430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152573431 . G . PASS END=152573463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,47,255:19,0 chr1 152573464 . G . PASS END=152573470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 152573471 . T . PASS END=152573479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:13:0,21,315:0,39,255:8,0 chr1 152573480 . G . PASS END=152573485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 152573486 . C . PASS END=152573490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152573491 . G . PASS END=152573492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 152586287 . A . PASS END=152586290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,405:0,36,255:13,0 chr1 152586291 . C . PASS END=152586312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:18,0 chr1 152586313 . G . PASS END=152586338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,770:0,66,255:26,0 chr1 152586339 . C . PASS END=152586353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152586354 . C . PASS END=152586354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 152586355 . A . PASS END=152586358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 152586359 . A . PASS END=152586359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,874:0,73,255:27,0 chr1 152586360 . G . PASS END=152586420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1141:0,93,255:35,0 chr1 152586421 . T . PASS END=152586421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 152586422 . G . PASS END=152586443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1155:0,80,255:29,0 chr1 152586444 . G . PASS END=152586456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1006:0,68,255:26,0 chr1 152586457 . C . PASS END=152586463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152586464 . T . PASS END=152586478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 152586479 . C . PASS END=152586479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:24,0 chr1 152586480 . G . PASS END=152586484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152586485 . C . PASS END=152586485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 152586486 . G . PASS END=152586491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 152586492 . A . PASS END=152586492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 152586493 . G . PASS END=152586497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 152586498 . C . PASS END=152586498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 152586499 . C . PASS END=152586499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 152586500 . A . PASS END=152586501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:19,0 chr1 152586502 . C . PASS END=152586502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:18,0 chr1 152586503 . T . PASS END=152586508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,784:0,52,255:19,0 chr1 152586509 . G . PASS END=152586509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr1 152586510 . A . PASS END=152586510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152586511 . C . PASS END=152586511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152586512 . A . PASS END=152586549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 152586550 . C . PASS END=152586550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:12,0 chr1 152586551 . T . PASS END=152586552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 152586553 . T . PASS END=152586556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152586557 . T . PASS END=152586557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:11,0 chr1 152586558 . C . PASS END=152586559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152586560 . G . PASS END=152586560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 152586561 . G . PASS END=152586563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 152586564 . G . PASS END=152586569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 152586570 . G . PASS END=152586570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 152586571 . C . PASS END=152586572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 152586573 . G . PASS END=152586573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr1 152586574 . A . PASS END=152586574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 152595310 . T . PASS END=152595318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 152595319 . G . PASS END=152595370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,62,255:26,0 chr1 152595371 . C . PASS END=152595373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr1 152595374 . T . PASS END=152595374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 152595375 . C . PASS END=152595376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152595377 . C . PASS END=152595443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 152595444 . T . PASS END=152595480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 152595481 . G . PASS END=152595484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 152595485 . C . PASS END=152595509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:17,0 chr1 152595510 . A . PASS END=152595579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 152636582 . A . PASS END=152636680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,582:0,48,255:19,0 chr1 152636681 . C . PASS END=152636685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:20,0 chr1 152636686 . G . PASS END=152636695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 152636696 . C . PASS END=152636711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,792:0,66,255:24,0 chr1 152636712 . T . PASS END=152636712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,675:0,55,255:23,0 chr1 152636713 . C . PASS END=152636715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:26,0 chr1 152636716 . T . PASS END=152636724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr1 152636725 . T . PASS END=152636725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 152636726 . G . PASS END=152636731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:29,0 chr1 152636732 . A . PASS END=152636732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 152636733 . G . PASS END=152636739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152636740 . G . PASS END=152636740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 152636741 . A . PASS END=152636905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1161:0,80,255:37,0 chr1 152636906 . T . PASS END=152636914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 152648492 . A . PASS END=152648500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152648501 . C . PASS END=152648501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 152648502 . A . PASS END=152648511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,679:0,63,255:21,0 chr1 152648512 . G . PASS END=152648512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 152648513 . C . PASS END=152648530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,847:0,66,255:26,0 chr1 152648531 . C . PASS END=152648532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152648533 . C . PASS END=152648533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 152648534 . A . PASS END=152648536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152648537 . T . PASS END=152648537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 152648538 . G . PASS END=152648541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:27,0 chr1 152648542 . T . PASS END=152648546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,978:0,70,255:26,0 chr1 152648547 . A . PASS END=152648548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152648549 . T . PASS END=152648550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 152648551 . T . PASS END=152648552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152648553 . C . PASS END=152648557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,77,255:26,0 chr1 152648558 . A . PASS END=152648560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152648561 . T . PASS END=152648574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1011:0,76,255:26,0 chr1 152648575 . T . PASS END=152648575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152648576 . C . PASS END=152648578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 152648579 . C . PASS END=152648582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152648583 . A . PASS END=152648584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 152648585 . T . PASS END=152648621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,83,255:32,0 chr1 152648622 . T . PASS END=152648622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,979:0,63,255:27,0 chr1 152648623 . C . PASS END=152648665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1124:0,83,255:33,0 chr1 152648666 . A . PASS END=152648666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:27,0 chr1 152648667 . G . PASS END=152648708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1134:0,86,255:33,0 chr1 152648709 . T . PASS END=152648709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1080:0,65,255:29,0 chr1 152648710 . G . PASS END=152648774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1103:0,85,255:34,0 chr1 152648775 . A . PASS END=152648775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1145:0,69,255:30,0 chr1 152648776 . A . PASS END=152648811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1097:0,85,255:36,0 chr1 152648812 . G . PASS END=152648812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 152648813 . G . PASS END=152648815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 152648816 . T . PASS END=152648824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:28:0,71,1061:0,71,255:25,0 chr1 152659320 . A . PASS END=152659324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 152659325 . T . PASS END=152659345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr1 152659346 . G . PASS END=152659356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 152659357 . C . PASS END=152659357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 152659358 . T . PASS END=152659394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:18,0 chr1 152659395 . C . PASS END=152659403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 152659404 . C . PASS END=152659404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152659405 . C . PASS END=152659423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 152659424 . G . PASS END=152659430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 152659431 . G . PASS END=152659468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:25,0 chr1 152659469 . C . PASS END=152659476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 152659477 . G . PASS END=152659480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 152659481 . C . PASS END=152659511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1163:0,87,255:31,0 chr1 152659512 . A . PASS END=152659536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 152659537 . T . PASS END=152659541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 152659542 . C . PASS END=152659572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr1 152659573 . G . PASS END=152659573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:22,0 chr1 152659574 . G . PASS END=152659595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 152659596 . G . PASS END=152659630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,592:0,48,255:19,0 chr1 152659631 . C . PASS END=152659652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,496:0,39,255:13,0 chr1 152671378 . A . PASS END=152671378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 152671379 . T . PASS END=152671402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,358:0,33,255:12,0 chr1 152671403 . A . PASS END=152671403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 152671404 . G . PASS END=152671407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152671408 . C . PASS END=152671430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 152671431 . A . PASS END=152671431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 152671432 . A . PASS END=152671432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152671433 . A . PASS END=152671433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr1 152671434 . A . PASS END=152671435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152671436 . G . PASS END=152671436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 152671437 . C . PASS END=152671438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152671439 . C . PASS END=152671440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,496:0,6,255:13,0 chr1 152671441 . C . PASS END=152671442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 152671443 . C . PASS END=152671464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 152671465 . C . PASS END=152671471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 152671472 . G . PASS END=152671474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 152671475 . C . PASS END=152671514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,847:0,62,255:26,0 chr1 152671515 . C . PASS END=152671515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 152671516 . A . PASS END=152671536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,876:0,69,255:26,0 chr1 152671537 . T . PASS END=152671542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 152671543 . T . PASS END=152671548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 152671549 . G . PASS END=152671553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 152671554 . C . PASS END=152671554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 152671555 . T . PASS END=152671676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1119:0,80,255:35,0 chr1 152671677 . C . PASS END=152671698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:25,0 chr1 152681552 . A . PASS END=152681556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 152681557 . C . LowGQ END=152681557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 152681558 . T . PASS END=152681559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 152681560 . C . LowGQ END=152681560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152681561 . C . PASS END=152681561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 152681562 . A . LowGQ END=152681562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152681563 . G . PASS END=152681567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 152681568 . A . LowGQ END=152681568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152681569 . C . PASS END=152681569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 152681570 . C . LowGQ END=152681570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:24,0,132:4,0 chr1 152681571 . A . PASS END=152681580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:5,0 chr1 152681581 . C . PASS END=152681598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,202:6,0 chr1 152681599 . T . PASS END=152681630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,243:0,21,243:9,0 chr1 152681631 . C . PASS END=152681631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 152681632 . A . PASS END=152681632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 152681633 . A . PASS END=152681636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 152681637 . G . PASS END=152681637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 152681638 . T . PASS END=152681638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 152681639 . G . PASS END=152681639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 152681640 . C . PASS END=152681660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 152681661 . T . PASS END=152681661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:10,0 chr1 152681662 . C . PASS END=152681666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 152681667 . C . PASS END=152681667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 152681668 . C . LowGQ END=152681669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:8,0 chr1 152681670 . G . PASS END=152681670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 152681671 . C . LowGQ END=152681672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:11:0,0,349:6,0,255:8,0 chr1 152681673 . G . PASS END=152681673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152681674 . T . LowGQ END=152681675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:11:0,0,263:3,0,255:8,0 chr1 152681676 . G . PASS END=152681676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 152681677 . C . PASS END=152681677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 152681678 . T . PASS END=152681678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 152681679 . C . LowGQ END=152681679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:8,0 chr1 152681680 . C CAGCTCTGGGGGCTGCTGT, 49.81 PASS DP=14;MQ=232.17;MQRankSum=-0.935;ReadPosRankSum=0.312;FractionInformativeReads=0.929;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,6,0:0.462,0.000:13:4,2,0:3,4,0:48:79,0,50,252,637,889:116,0,255:7,5:4.9812e+01,6.7045e-05,5.3000e+01,2.5746e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:4,3,2,4:5,2,4,2 chr1 152681681 . A . LowGQ END=152681681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,271:69,0,255:11,0 chr1 152681682 . G . PASS END=152681694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 152681695 . T . LowGQ END=152681696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,304:30,0,255:11,0 chr1 152681697 . G . PASS END=152681698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 152681699 . T . LowGQ END=152681699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,349:38,0,255:10,0 chr1 152681700 . G . PASS END=152681702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 152681703 . G . LowGQ END=152681705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,319:39,0,255:10,0 chr1 152681706 . G . PASS END=152681706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 152681707 . C . LowGQ END=152681713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,280:38,0,255:9,0 chr1 152681714 . G . PASS END=152681715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 152681716 . A . LowGQ END=152681717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,319:3,0,255:10,0 chr1 152681718 . G . PASS END=152681718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152681719 . T . LowGQ END=152681720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 152681721 . G . PASS END=152681722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152681723 . T . LowGQ END=152681723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 152681724 . G . PASS END=152681725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152681726 . T . PASS END=152681731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152681732 . A . PASS END=152681740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 152681741 . A . PASS END=152681776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 152681777 . T C, 0.02 DRAGENSnpHardQUAL DP=9;MQ=243.98;MQRankSum=0.751;ReadPosRankSum=-0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:5,0,0:3,1,0:23:12,0,50,36,257,293:12,0,255:8,0:2.3698e-02,2.2644e+01,7.5644e+01,5.8411e+01,3.1475e+02,3.1875e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,0,1:2,6,1,0 chr1 152681778 . C . PASS END=152681778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 152681779 . C . PASS END=152681780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 152681781 . A . PASS END=152681783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152681784 . G . PASS END=152681794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:10,0 chr1 152681795 . G . PASS END=152681813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 152681814 . G . PASS END=152681851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,258:0,24,255:9,0 chr1 152691998 . A . PASS END=152692000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1119:0,85,255:34,0 chr1 152692001 . T . PASS END=152692001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:33,0 chr1 152692002 . G . PASS END=152692467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:34:0,99,1251:0,99,255:40,0 chr1 152692468 . T . PASS END=152692468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1416:0,72,255:40,0 chr1 152692469 . G . PASS END=152692594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:35:0,82,1258:0,82,255:40,0 chr1 152692595 . T . PASS END=152692595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1190:0,66,255:33,0 chr1 152692596 . G . PASS END=152692603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1247:0,86,255:34,0 chr1 152692604 . A . PASS END=152692604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:27,0 chr1 152692605 . A . PASS END=152692611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 152692612 . A . PASS END=152692613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 152692614 . G . PASS END=152692619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 152692620 . G . PASS END=152692623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:27:0,78,1170:0,81,255:26,0 chr1 152692624 . C . PASS END=152692626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152692627 . T . PASS END=152692628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 152692629 . G . PASS END=152692631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1169:0,80,255:29,0 chr1 152692632 . C . PASS END=152692632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 152692633 . T . PASS END=152692635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 152692636 . G . PASS END=152692636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 152692637 . G . PASS END=152692651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr1 152692652 . T . PASS END=152692652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 152692653 . G . PASS END=152692657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 152692658 . T . PASS END=152692658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 152692659 . G . PASS END=152692663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 152692664 . A . PASS END=152692664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 152692665 . G . PASS END=152692666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152692667 . T . PASS END=152692667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 152692668 . C . PASS END=152692669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152692670 . G . PASS END=152692670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 152692671 . G . PASS END=152692675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 152692676 . T . PASS END=152692676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 152692677 . G . PASS END=152692678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 152692679 . T . PASS END=152692679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 152692680 . G . PASS END=152692697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1149:0,83,255:33,0 chr1 152692698 . T . PASS END=152692713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,74,255:26,0 chr1 152692714 . T . PASS END=152692714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:24,0 chr1 152692715 . G . PASS END=152692735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,922:0,71,255:24,0 chr1 152692736 . G . PASS END=152692736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 152692737 . A . PASS END=152692748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr1 152692749 . A . PASS END=152692750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr1 152732065 . A . PASS END=152732398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:40:0,91,1476:0,91,255:40,0 chr1 152732399 . C . PASS END=152732435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,113,1800:0,113,255:40,0 chr1 152732436 . G C, 49.28 PASS DP=55;MQ=250.00;MQRankSum=6.330;ReadPosRankSum=2.324;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,25,0:0.455,0.000:55:10,12,0:20,13,0:48:84,0,50,875,1064,1939:255,0,255:27,0:4.9282e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,17,9,16:15,15,14,11 chr1 152732437 . T . PASS END=152732473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,142,255:40,0 chr1 152732474 . C . PASS END=152732546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:39:0,80,1371:0,80,255:40,0 chr1 152732547 . T . PASS END=152732547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 152732548 . G . PASS END=152732554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,81,255:36,0 chr1 152732555 . T . PASS END=152732555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 152732556 . G . PASS END=152732559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:28,0 chr1 152732560 . A . PASS END=152732566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 152732567 . G . PASS END=152732569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 152732570 . C . PASS END=152732570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:27,0 chr1 152732571 . T . PASS END=152732646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1186:0,83,255:40,0 chr1 152732647 . T . PASS END=152732647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr1 152732648 . T . PASS END=152732726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1139:0,80,255:37,0 chr1 152732727 . T . PASS END=152732727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:27,0 chr1 152732728 . C . PASS END=152732734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 152732735 . G . PASS END=152732735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:27,0 chr1 152732736 . G . PASS END=152732744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1133:0,80,255:28,0 chr1 152732745 . T . PASS END=152732745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:27,0 chr1 152732746 . A . PASS END=152732747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152732748 . T . PASS END=152732751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1070:0,74,255:27,0 chr1 152732752 . T . PASS END=152732752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:27,0 chr1 152732753 . G . PASS END=152732753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152732754 . T . PASS END=152732754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:25,0 chr1 152732755 . G . PASS END=152732773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:25,0 chr1 152732774 . A . PASS END=152732791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 152732792 . T . PASS END=152732796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 152732797 . G . PASS END=152732809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:17,0 chr1 152732810 . C . PASS END=152732810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 152732811 . T . PASS END=152732825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 152732826 . A . PASS END=152732826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 152732827 . T . PASS END=152732827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 152732828 . G . PASS END=152732828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,596:0,15,255:12,0 chr1 152732829 . C . PASS END=152732829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 152732830 . C . PASS END=152732831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 152732832 . T . PASS END=152732832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:14,0 chr1 152732833 . C . PASS END=152732837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 152732838 . T . PASS END=152732838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 152732839 . C . PASS END=152732871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:19,0 chr1 152732872 . T . PASS END=152732872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152732873 . C . PASS END=152732875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 152732876 . C . PASS END=152732879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 152732880 . A . PASS END=152732880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:19,0 chr1 152732881 . A . PASS END=152732898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:21,0 chr1 152732899 . T . PASS END=152732902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 152732903 . G . PASS END=152732934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr1 152732935 . T . PASS END=152732954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 152732955 . A . PASS END=152732956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,559:0,34,255:13,0 chr1 152732957 . C . PASS END=152732983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,537:0,41,255:18,0 chr1 152732984 . G . PASS END=152732984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 152732985 . T . PASS END=152732989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,617:0,57,255:19,0 chr1 152732990 . G . PASS END=152733011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 152733012 . C . PASS END=152733023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 152733024 . A . PASS END=152733034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 152733035 . A . PASS END=152733035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 152733036 . G . PASS END=152733047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 152733048 . G . PASS END=152733053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,721:0,49,255:20,0 chr1 152733054 . C . PASS END=152733055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152733056 . C . PASS END=152733056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 152733057 . C . PASS END=152733074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 152733075 . G . PASS END=152733096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 152733097 . G . PASS END=152733098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 152733099 . T . PASS END=152733100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152733101 . A . PASS END=152733126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr1 152733127 . C . PASS END=152733127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 152733128 . A . PASS END=152733143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 152733144 . G . PASS END=152733145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 152733146 . C . PASS END=152733146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 152733147 . C . PASS END=152733154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 152733155 . G . PASS END=152733155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 152733156 . C . PASS END=152733158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:30,0 chr1 152733159 . C . PASS END=152733159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152733160 . T . PASS END=152733160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 152733161 . C . PASS END=152733163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 152733164 . G . PASS END=152733263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1215:0,86,255:34,0 chr1 152733264 . A . PASS END=152733280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1202:0,83,255:31,0 chr1 152733281 . C . PASS END=152733281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr1 152733282 . A . PASS END=152733300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,89,255:31,0 chr1 152733301 . T A, 48.91 PASS DP=32;MQ=248.77;MQRankSum=4.767;ReadPosRankSum=2.108;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:6,7,0:12,7,0:47:84,0,50,493,636,1128:255,0,255:17,0:4.8908e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,5,5,9:7,11,6,8 chr1 152733302 . G . PASS END=152733305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 152733306 . A . PASS END=152733306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152733307 . A . PASS END=152733316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 152733317 . C . PASS END=152733338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 152733339 . A . PASS END=152733385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,795:0,69,255:25,0 chr1 152733386 . G . PASS END=152733386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152733387 . T . PASS END=152733387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 152733388 . C . PASS END=152733388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152733389 . C . PASS END=152733389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 152733390 . A . PASS END=152733396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 152733397 . C . PASS END=152733397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 152733398 . G . PASS END=152733400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152733401 . C . PASS END=152733402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,992:0,68,255:26,0 chr1 152733403 . G . PASS END=152733405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152733406 . C . PASS END=152733406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152733407 . C . PASS END=152733426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1163:0,80,255:30,0 chr1 152733427 . T . PASS END=152733445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,978:0,78,255:26,0 chr1 152733446 . G . PASS END=152733447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 152733448 . C . PASS END=152733467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 152733468 . G . PASS END=152733469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 152733470 . A . PASS END=152733474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 152733475 . G . PASS END=152733521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,676:0,57,255:19,0 chr1 152733522 . A . PASS END=152733522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 152733523 . A . PASS END=152733549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,613:0,48,255:17,0 chr1 152733550 . C . PASS END=152733553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 152733554 . G . PASS END=152733559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 152733560 . G . PASS END=152733572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:26,0 chr1 152733573 . C . PASS END=152733575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 152733576 . A . PASS END=152733576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 152733577 . A . PASS END=152733584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 152733585 . T . PASS END=152733585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 152733586 . C . PASS END=152733611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1017:0,84,255:31,0 chr1 152733612 . T . PASS END=152733613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 152733614 . A . PASS END=152733804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1108:0,87,255:40,0 chr1 152748848 . A . PASS END=152748848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 152748849 . T . PASS END=152748871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,863:0,61,255:26,0 chr1 152748872 . C . PASS END=152748880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:27,0 chr1 152748881 . C . PASS END=152748881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 152748882 . C . PASS END=152748883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 152748884 . C . PASS END=152748889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,959:0,65,255:26,0 chr1 152748890 . A . PASS END=152748890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:25,0 chr1 152748891 . A . PASS END=152748892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,992:0,70,255:26,0 chr1 152748893 . T . PASS END=152748895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152748896 . A . PASS END=152748906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr1 152748907 . C . PASS END=152748936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,631:0,43,255:22,0 chr1 152748937 . C . PASS END=152748939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152748940 . A . PASS END=152748940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:19,0 chr1 152748941 . A . PASS END=152748941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152748942 . A . PASS END=152748942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:19,0 chr1 152748943 . G . PASS END=152748943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 152748944 . T . PASS END=152748957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,898:0,62,255:23,0 chr1 152748958 . C . PASS END=152748958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:18,0 chr1 152748959 . C . PASS END=152748959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,714:0,14,255:17,0 chr1 152748960 . C . PASS END=152748963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,53,255:17,0 chr1 152748964 . T . PASS END=152748964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:17,0 chr1 152748965 . G . PASS END=152748975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr1 152748976 . C . PASS END=152748977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152748978 . G . PASS END=152748978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:19,0 chr1 152748979 . C . PASS END=152748982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:23,0 chr1 152748983 . G . PASS END=152748983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 152748984 . T . PASS END=152748984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 152748985 . C . PASS END=152748985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 152748986 . A . PASS END=152748989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 152748990 . C . PASS END=152748990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 152748991 . C . PASS END=152748991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152748992 . G . PASS END=152748992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:20,0 chr1 152748993 . G . PASS END=152748994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152748995 . G . PASS END=152748995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 152748996 . G . PASS END=152748996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 152748997 . C . PASS END=152748997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152748998 . T . PASS END=152748998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 152748999 . G . PASS END=152749003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 152749004 . G . PASS END=152749004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 152749005 . G . PASS END=152749007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 152749008 . C . PASS END=152749008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 152749009 . C . PASS END=152749017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152749018 . G . PASS END=152749018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 152749019 . G . PASS END=152749026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,770:0,60,255:21,0 chr1 152749027 . C . PASS END=152749027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 152749028 . A . PASS END=152749031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152749032 . C . PASS END=152749037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 152749038 . G . PASS END=152749041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152749042 . T . PASS END=152749086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 152749087 . C . PASS END=152749090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 152749091 . C . PASS END=152749098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:19,0 chr1 152749099 . G . PASS END=152749119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 152749120 . G . PASS END=152749121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152749122 . G . PASS END=152749124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 152749125 . C . PASS END=152749125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152749126 . T . PASS END=152749156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:23,0 chr1 152749157 . A . PASS END=152749157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 152749158 . G . PASS END=152749175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 152749176 . G . PASS END=152749200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:18,0 chr1 152749201 . C . PASS END=152749202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 152749203 . G . PASS END=152749203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 152749204 . A . PASS END=152749204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:14,0 chr1 152759776 . A . PASS END=152759801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,890:0,61,255:26,0 chr1 152759802 . G . PASS END=152759802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 152759803 . T . PASS END=152759804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152759805 . C . PASS END=152759805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 152759806 . C . PASS END=152759807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152759808 . G . PASS END=152759808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 152759809 . C . PASS END=152759811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 152759812 . C . PASS END=152759812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 152759813 . C . PASS END=152759816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 152759817 . C . PASS END=152759818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 152759819 . A . PASS END=152759823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152759824 . A . PASS END=152759844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,875:0,66,255:26,0 chr1 152759845 . T . PASS END=152759847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152759848 . C . PASS END=152759848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 152759849 . C . PASS END=152759849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:26,0 chr1 152759850 . C . PASS END=152759850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 152759851 . A . PASS END=152759852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:27,0 chr1 152759853 . C . PASS END=152759853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 152759854 . C . PASS END=152759854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 152759855 . C . PASS END=152759855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 152759856 . C . PASS END=152759856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 152759857 . A . PASS END=152759857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 152759858 . A . PASS END=152759858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:17:29:0,17,850:0,17,255:27,0 chr1 152759859 . A . PASS END=152759860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 152759861 . G . PASS END=152759861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 152759862 . C . PASS END=152759863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,970:0,56,255:28,0 chr1 152759864 . C . PASS END=152759866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 152759867 . C . PASS END=152759869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 152759870 . A . PASS END=152759870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152759871 . G . PASS END=152759871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr1 152759872 . T . PASS END=152759879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:29,0 chr1 152759880 . T . PASS END=152759880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:35:32:0,35,1071:0,35,255:27,0 chr1 152759881 . A . PASS END=152759886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:29,0 chr1 152759887 . C . PASS END=152759889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:31:0,68,1080:0,68,255:28,0 chr1 152759890 . C . PASS END=152759890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 152759891 . C . PASS END=152759891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1113:0,71,255:27,0 chr1 152759892 . A . PASS END=152759912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1156:0,83,255:32,0 chr1 152759913 . C . PASS END=152759948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1150:0,85,255:35,0 chr1 152759949 . C . PASS END=152759949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1088:0,47,255:28,0 chr1 152759950 . A G, 48.90 PASS DP=34;MQ=133.45;MQRankSum=-0.776;ReadPosRankSum=4.503;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,16,0:0.471,0.000:34:10,8,0:8,8,0:47:84,0,50,564,644,1208:255,0,255:15,0:4.8899e+01,7.9730e-05,5.2600e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,7,9:11,7,9,7 chr1 152759951 . G . PASS END=152759973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1188:0,90,255:32,0 chr1 152759974 . T . PASS END=152759974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:27,0 chr1 152759975 . G . PASS END=152759978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 152759979 . C . PASS END=152759987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,74,255:26,0 chr1 152759988 . G . PASS END=152759994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 152759995 . G . PASS END=152760003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152760004 . C . PASS END=152760041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 152760042 . A . PASS END=152760042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152760043 . C . PASS END=152760053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 152760054 . T . PASS END=152760087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:19,0 chr1 152760088 . T . PASS END=152760088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 152760089 . G . PASS END=152760090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 152760091 . T . PASS END=152760132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 152770271 . A . PASS END=152770286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 152770287 . G . PASS END=152770309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 152770310 . C . PASS END=152770310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 152770311 . C . PASS END=152770321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr1 152770322 . C . PASS END=152770324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152770325 . A . PASS END=152770325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 152770326 . A . PASS END=152770330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr1 152770331 . A . PASS END=152770331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr1 152770332 . C . PASS END=152770337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 152770338 . A . PASS END=152770338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 152770339 . G . PASS END=152770346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 152770347 . C . PASS END=152770351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 152770352 . A . PASS END=152770352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152770353 . A . PASS END=152770357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152770358 . C . PASS END=152770358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 152770359 . C . PASS END=152770385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 152770386 . G . PASS END=152770386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 152770387 . C . PASS END=152770387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 152770388 . T . PASS END=152770388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 152770389 . G . PASS END=152770409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 152770410 . G . PASS END=152770423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 152770424 . T . PASS END=152770425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152770426 . T . PASS END=152770426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 152770427 . G . PASS END=152770427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 152770428 . G . PASS END=152770428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 152770429 . G . PASS END=152770434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 152770435 . C . PASS END=152770438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 152770439 . G . PASS END=152770446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 152770447 . C . PASS END=152770447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 152770448 . T . PASS END=152770458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 152770459 . C . LowGQ END=152770459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:10,0 chr1 152770460 . T . PASS END=152770469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 152770470 . G . PASS END=152770484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,311:0,27,255:9,0 chr1 152770485 . G . PASS END=152770487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 152770488 . T . PASS END=152770489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152770490 . A . PASS END=152770492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 152770493 . C . PASS END=152770536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 152770537 . T . PASS END=152770537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 152770538 . G . PASS END=152770549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr1 152770550 . C . PASS END=152770583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 152770584 . G . PASS END=152770584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr1 152770585 . C . PASS END=152770591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 152770592 . C . LowGQ END=152770592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 152770593 . A . PASS END=152770604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 152770605 . G . LowGQ END=152770605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 152770606 . C . PASS END=152770615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 152777598 . T . PASS END=152777600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 152777601 . G . PASS END=152777603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 152777604 . G . PASS END=152777604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152777605 . C . PASS END=152777615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,798:0,50,255:19,0 chr1 152777616 . G . PASS END=152777639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 152777640 . G . PASS END=152777640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 152777641 . C . PASS END=152777655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 152777656 . G . PASS END=152777656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr1 152777657 . A . PASS END=152777684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,884:0,61,255:25,0 chr1 152777685 . G . PASS END=152777685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:23,0 chr1 152777686 . G . PASS END=152777720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,992:0,68,255:26,0 chr1 152777721 . G . PASS END=152777723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 152777724 . C . PASS END=152777724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 152777725 . A . PASS END=152777725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152777726 . G . PASS END=152777726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 152777727 . G . PASS END=152777738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 152777739 . T . PASS END=152777739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1009:0,51,255:29,1 chr1 152777740 . C . PASS END=152777740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:31:32:0,31,1082:0,31,255:30,1 chr1 152777741 . C . PASS END=152777830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1219:0,86,255:40,0 chr1 152777831 . A . PASS END=152777835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1280:0,80,255:33,0 chr1 152777836 . A . PASS END=152777836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:31,0 chr1 152777837 . C . PASS END=152777837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 152777838 . A . PASS END=152777838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1235:0,78,255:32,0 chr1 152777839 . G . PASS END=152777858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:33:0,81,1089:0,81,255:34,0 chr1 152777859 . C . PASS END=152777859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1105:0,71,255:28,0 chr1 152777860 . T . PASS END=152777861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 152777862 . T . PASS END=152777862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1047:0,49,255:27,0 chr1 152777863 . G . PASS END=152777867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 152777868 . A G, 47.99 PASS DP=29;MQ=167.56;MQRankSum=-2.768;ReadPosRankSum=2.369;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:8,4,0:9,8,0:46:83,0,47,183,183,183:255,0,255:18,0:4.7992e+01,1.1235e-04,5.0000e+01,1.8276e+02,2.1753e+02,1.8577e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,8,7,5:6,11,7,5 chr1 152777869 . C . PASS END=152777869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 152777870 . A . PASS END=152777870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr1 152777871 . C . PASS END=152777871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,872:0,21,255:26,0 chr1 152777872 . T . PASS END=152777873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 152777874 . T . PASS END=152777874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:27,0 chr1 152777875 . G . PASS END=152777875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 152777876 . G . PASS END=152777876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 152777877 . G . PASS END=152777877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 152777878 . G . PASS END=152777891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:29:0,60,1008:0,60,255:26,0 chr1 152777892 . A . PASS END=152777892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:21,0 chr1 152777893 . G . PASS END=152777896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,73,255:24,0 chr1 152777897 . A . PASS END=152777897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:20,0 chr1 152777898 . C . PASS END=152777899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:22,0 chr1 152777900 . T . PASS END=152777900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:19,0 chr1 152777901 . G . PASS END=152777902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:21,0 chr1 152777903 . G . PASS END=152777903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 152777904 . G . PASS END=152777905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 152777906 . T . PASS END=152777906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,809:0,44,255:19,0 chr1 152777907 . G . PASS END=152777908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 152777909 . A . PASS END=152777910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 152777911 . T . PASS END=152777911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 152777912 . T . PASS END=152777919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 152777920 . G . PASS END=152777924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,782:0,53,255:19,0 chr1 152777925 . G . PASS END=152777926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 152777927 . A . PASS END=152777930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,828:0,53,255:19,0 chr1 152777931 . C . PASS END=152777943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:23,0 chr1 152777944 . T . PASS END=152777944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 152777945 . G . PASS END=152777954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 152784923 . A . PASS END=152784937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,552:0,48,255:17,0 chr1 152784938 . A . PASS END=152784938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 152784939 . A . PASS END=152784961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,607:0,51,255:19,0 chr1 152784962 . C . PASS END=152784978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,686:0,60,255:21,0 chr1 152784979 . G . PASS END=152784979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,638:0,24,255:20,0 chr1 152784980 . T . PASS END=152784980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 152784981 . G . PASS END=152784982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,705:0,47,255:21,0 chr1 152784983 . C . PASS END=152784989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 152784990 . A . PASS END=152784998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:20:0,53,806:0,53,255:19,0 chr1 152784999 . C . PASS END=152785004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 152785005 . G . PASS END=152785010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 152785011 . C . PASS END=152785011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,593:0,32,255:17,0 chr1 152785012 . C . PASS END=152785017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,632:0,49,255:19,0 chr1 152785018 . G . PASS END=152785018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152785019 . T . PASS END=152785019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 152785020 . G . PASS END=152785022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 152785023 . C . PASS END=152785023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 152785024 . C . PASS END=152785030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,817:0,69,255:23,0 chr1 152785031 . T . PASS END=152785033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 152785034 . C . PASS END=152785038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 152785039 . A . PASS END=152785042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:56:24:0,56,855:0,56,255:20,0 chr1 152785043 . T . PASS END=152785044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 152785045 . T . PASS END=152785047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 152785048 . C . PASS END=152785051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 152785052 . T . PASS END=152785052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,737:0,22,255:19,0 chr1 152785053 . G . PASS END=152785053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152785054 . C . PASS END=152785054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:20,0 chr1 152785055 . A . PASS END=152785064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 152785065 . C . PASS END=152785065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr1 152785066 . C . PASS END=152785068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152785069 . A . PASS END=152785070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 152785071 . G . PASS END=152785071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 152785072 . C . PASS END=152785072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 152785073 . T . PASS END=152785074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 152785075 . C . PASS END=152785075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:22,0 chr1 152785076 . T . PASS END=152785076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 152785077 . G . PASS END=152785077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 152785078 . T . PASS END=152785083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 152785084 . C . PASS END=152785084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 152785085 . A . PASS END=152785088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 152785089 . C . PASS END=152785090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:19,0 chr1 152785091 . G . PASS END=152785095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 152785096 . A . PASS END=152785097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,855:0,59,255:19,0 chr1 152785098 . G . PASS END=152785111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:22,0 chr1 152785112 . T . PASS END=152785112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 152785113 . C . PASS END=152785125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:24,0 chr1 152785126 . C . PASS END=152785126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:18,0 chr1 152785127 . A . PASS END=152785132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr1 152785133 . G . PASS END=152785145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 152785146 . G . PASS END=152785148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 152785149 . G . PASS END=152785154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 152785155 . G . PASS END=152785155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 152785156 . C . PASS END=152785158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 152785159 . C . PASS END=152785159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 152785160 . C . PASS END=152785160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 152785161 . A . PASS END=152785161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 152785162 . C . PASS END=152785169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr1 152785170 . G A, 48.66 PASS DP=24;MQ=122.28;MQRankSum=0.927;ReadPosRankSum=2.317;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,11,0:0.458,0.000:24:6,3,0:7,8,0:47:83,0,49,393,436,830:255,0,255:11,0:4.8658e+01,8.6460e-05,5.2000e+01,3.9349e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,4,7:8,5,8,3 chr1 152785171 . T . PASS END=152785181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 152785182 . G . PASS END=152785207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 152785208 . T . PASS END=152785217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 152785218 . C . PASS END=152785218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 152785219 . C . PASS END=152785219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 152785220 . T . PASS END=152785220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 152785221 . C . PASS END=152785224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 152785225 . G . PASS END=152785247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,458:0,39,255:13,0 chr1 152785248 . G . PASS END=152785248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 152785249 . G . PASS END=152785258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 152785259 . C . PASS END=152785262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 152785263 . C . PASS END=152785263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 152785264 . T . PASS END=152785266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 152785267 . A . LowGQ END=152785267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:8,0 chr1 152785268 . G . PASS END=152785268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 152785269 . G . PASS END=152785279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 152799949 . A . PASS END=152799952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,601:0,57,255:19,0 chr1 152799953 . C . PASS END=152799979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,762:0,60,255:22,0 chr1 152799980 . A . PASS END=152799980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 152799981 . G . PASS END=152799996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,787:0,61,255:25,0 chr1 152799997 . A . PASS END=152799997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,776:0,45,255:22,0 chr1 152799998 . C . PASS END=152800004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,825:0,61,255:25,0 chr1 152800005 . G . PASS END=152800005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,762:0,45,255:22,0 chr1 152800006 . T . PASS END=152800010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,848:0,61,255:23,0 chr1 152800011 . T . PASS END=152800011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,792:0,45,255:21,0 chr1 152800012 . C . PASS END=152800014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 152800015 . A . PASS END=152800015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,778:0,31,255:21,0 chr1 152800016 . A . PASS END=152800021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:23,0 chr1 152800022 . C . PASS END=152800022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:21,0 chr1 152800023 . C . PASS END=152800034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,833:0,61,255:22,0 chr1 152800035 . C . PASS END=152800035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 152800036 . C . PASS END=152800043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 152800044 . G . PASS END=152800044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 152800045 . T . PASS END=152800047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:23,0 chr1 152800048 . C . PASS END=152800050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 152800051 . C . PASS END=152800065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr1 152800066 . G . PASS END=152800069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 152800070 . C . PASS END=152800070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 152800071 . T . PASS END=152800072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 152800073 . C . PASS END=152800073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:27,0 chr1 152800074 . C . PASS END=152800074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 152800075 . T . PASS END=152800076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:28,0 chr1 152800077 . C . PASS END=152800079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 152800080 . C . PASS END=152800080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 152800081 . A . PASS END=152800081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 152800082 . G . PASS END=152800082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 152800083 . T . PASS END=152800083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 152800084 . G . PASS END=152800085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1186:0,93,255:31,0 chr1 152800086 . C . PASS END=152800086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 152800087 . A . PASS END=152800090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152800091 . C . PASS END=152800091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 152800092 . C . PASS END=152800101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 152800102 . T . PASS END=152800102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 152800103 . G . PASS END=152800107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1172:0,93,255:32,0 chr1 152800108 . T . PASS END=152800108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 152800109 . C . PASS END=152800165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1164:0,80,255:32,0 chr1 152800166 . G . PASS END=152800166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 152800167 . G . PASS END=152800179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 152800180 . C . PASS END=152800189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1039:0,71,255:26,0 chr1 152800190 . G . PASS END=152800220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 152800221 . C . PASS END=152800221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 152800222 . T . PASS END=152800244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:17,0 chr1 152800245 . A . PASS END=152800281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,449:0,36,255:13,0 chr1 152815997 . A . PASS END=152815997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 152815998 . T . PASS END=152815998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 152815999 . G . PASS END=152816027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,720:0,44,255:19,0 chr1 152816028 . C . PASS END=152816028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 152816029 . T . PASS END=152816035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 152816036 . G . PASS END=152816046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,845:0,63,255:22,0 chr1 152816047 . C . PASS END=152816047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,0 chr1 152816048 . T . PASS END=152816056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 152816057 . C . PASS END=152816058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 152816059 . A . PASS END=152816059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 152816060 . A . PASS END=152816065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152816066 . A . PASS END=152816067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 152816068 . C . PASS END=152816068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 152816069 . C . PASS END=152816069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 152816070 . C . PASS END=152816077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1194:0,83,255:30,0 chr1 152816078 . G . PASS END=152816078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:29,0 chr1 152816079 . C . PASS END=152816082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 152816083 . C . PASS END=152816083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 152816084 . T . PASS END=152816133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1072:0,80,255:33,0 chr1 152816134 . C . PASS END=152816134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 152816135 . C . PASS END=152816182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1111:0,90,255:34,0 chr1 152816183 . T . PASS END=152816195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 152816196 . G . PASS END=152816198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 152816199 . C . PASS END=152816212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:21,0 chr1 152816213 . A . PASS END=152816232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,629:0,40,255:18,0 chr1 152816233 . C . PASS END=152816233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 152816234 . G . PASS END=152816239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 152833174 . A . PASS END=152833200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,325:0,27,255:9,0 chr1 152833201 . T . PASS END=152833216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 152833217 . A . PASS END=152833217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 152833218 . G . PASS END=152833231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 152833232 . A . PASS END=152833232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 152833233 . T . PASS END=152833233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 152833234 . C . PASS END=152833234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 152833235 . C . PASS END=152833236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 152833237 . T . PASS END=152833241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 152833242 . G . PASS END=152833243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 152833244 . G . PASS END=152833245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 152833246 . A . PASS END=152833248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 152833249 . C . PASS END=152833249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 152833250 . C . PASS END=152833267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:18,0 chr1 152833268 . G . PASS END=152833282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,686:0,60,255:21,0 chr1 152833283 . C . PASS END=152833285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 152833286 . C . PASS END=152833313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 152833314 . T . PASS END=152833314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 152833315 . T . PASS END=152833319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,840:0,69,255:24,0 chr1 152833320 . T . PASS END=152833320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 152833321 . A . PASS END=152833323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 152833324 . T . PASS END=152833324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 152833325 . C . PASS END=152833325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 152833326 . T . PASS END=152833326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 152833327 . G . PASS END=152833327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 152833328 . G . PASS END=152833328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:23,0 chr1 152833329 . C . PASS END=152833330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 152833331 . T . PASS END=152833331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 152833332 . T . PASS END=152833336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,833:0,72,255:24,0 chr1 152833337 . G . PASS END=152833337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 152833338 . C . PASS END=152833353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 152833354 . T . PASS END=152833354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 152833355 . C . PASS END=152833367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 152833368 . A . PASS END=152833370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 152833371 . A . PASS END=152833385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:22,0 chr1 152833386 . G . PASS END=152833386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 152833387 . C . PASS END=152833394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 152833395 . T . PASS END=152833395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 152833396 . T . PASS END=152833430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 152833431 . C . PASS END=152833452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:16:0,41,630:0,41,255:19,0 chr1 152833453 . T . PASS END=152833461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 152856899 . A . PASS END=152856899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:18,0 chr1 152856900 . T . PASS END=152856907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 152856908 . C . PASS END=152856909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:21,0 chr1 152856910 . G . PASS END=152856910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 152856911 . A . PASS END=152856911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 152856912 . C . PASS END=152856915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,863:0,72,255:26,0 chr1 152856916 . A . PASS END=152856916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr1 152856917 . C . PASS END=152856918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 152856919 . C . PASS END=152856919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 152856920 . A . PASS END=152856920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 152856921 . G . PASS END=152856927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 152856928 . C . PASS END=152856928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 152856929 . T . PASS END=152856935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152856936 . C . PASS END=152856936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 152856937 . A . PASS END=152856937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152856938 . A . PASS END=152856938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:27,0 chr1 152856939 . A . PASS END=152856939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152856940 . A . PASS END=152856940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 152856941 . G . PASS END=152856950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:30,0 chr1 152856951 . G . PASS END=152856953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 152856954 . G . PASS END=152856956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 152856957 . C . PASS END=152856958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 152856959 . C . PASS END=152856960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 152856961 . A . PASS END=152856961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 152856962 . C . PASS END=152857074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1090:0,80,255:40,0 chr1 152857075 . C . PASS END=152857075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr1 152857076 . C . PASS END=152857177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1081:0,80,255:39,0 chr1 152857178 . A . PASS END=152857178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,906:0,76,255:28,0 chr1 152857179 . C . PASS END=152857202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1202:0,83,255:33,0 chr1 152857203 . A . PASS END=152857205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1151:0,63,255:31,0 chr1 152857206 . A . PASS END=152857209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1149:0,93,255:31,0 chr1 152857210 . G . PASS END=152857210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 152857211 . C . PASS END=152857223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 152857224 . A . PASS END=152857224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr1 152857225 . A . PASS END=152857225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 152857226 . A . PASS END=152857226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr1 152857227 . A . PASS END=152857228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 152857229 . G . PASS END=152857230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 152857231 . G . PASS END=152857231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:25,0 chr1 152857232 . T . PASS END=152857239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:28:0,76,1019:0,76,255:26,0 chr1 152857240 . A . PASS END=152857240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:21,0 chr1 152857241 . A . PASS END=152857249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:23,0 chr1 152882274 . A . PASS END=152882287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 152882288 . C . PASS END=152882288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 152882289 . A . PASS END=152882293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,992:0,75,255:26,0 chr1 152882294 . G . PASS END=152882297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 152882298 . G . PASS END=152882298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 152882299 . T . PASS END=152882300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 152882301 . A . PASS END=152882301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 152882302 . C . PASS END=152882347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,942:0,81,255:33,0 chr1 152882348 . T . PASS END=152882350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 152882351 . A . PASS END=152882401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1058:0,80,255:33,0 chr1 152882402 . A . PASS END=152882402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 152882403 . T . PASS END=152882423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 152882424 . C . PASS END=152882424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152882425 . T . PASS END=152882449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1156:0,83,255:33,0 chr1 152882450 . A . PASS END=152882450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:31,0 chr1 152882451 . G . PASS END=152882851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1147:0,80,255:40,0 chr1 152882852 . G . PASS END=152882855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 152882856 . C . PASS END=152882862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 152882863 . A . PASS END=152882863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 152882864 . G . PASS END=152882865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 152882866 . A . PASS END=152882866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 152882867 . G . PASS END=152882867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:25,0 chr1 152882868 . C . PASS END=152882869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152882870 . G . PASS END=152882870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 152882871 . G . PASS END=152882871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 152882872 . A . PASS END=152882872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 152882873 . G . PASS END=152882873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 152882874 . G . PASS END=152882914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,846:0,61,255:26,0 chr1 152882915 . G . PASS END=152882915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:21,0 chr1 152882916 . C . PASS END=152882917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,961:0,65,255:22,0 chr1 152882918 . C . PASS END=152882920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,922:0,45,255:24,0 chr1 152882921 . A . PASS END=152882926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,970:0,67,255:26,0 chr1 152882927 . G . PASS END=152882927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 152882928 . C . PASS END=152882929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 152882930 . G . PASS END=152882930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:25,0 chr1 152882931 . G . PASS END=152882938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:25,0 chr1 152882939 . G . PASS END=152882939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 152882940 . C . PASS END=152882945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 152882946 . C . PASS END=152882946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 152882947 . T . PASS END=152882947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 152882948 . C . PASS END=152882951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 152882952 . G . LowGQ END=152882952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,9:27:0:27:0,0,349:223,0,255:18,0 chr1 152882953 . A . PASS END=152882953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 152882954 . G . PASS END=152882955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 152882956 . A . PASS END=152882956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 152882957 . G . PASS END=152882957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 152882958 . C . PASS END=152882960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:27,0 chr1 152882961 . G . PASS END=152882961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 152882962 . A . PASS END=152882962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 152882963 . G . PASS END=152882963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 152882964 . G . PASS END=152882964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 152882965 . G . PASS END=152882965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 152882966 . G . PASS END=152882969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 152882970 . C . PASS END=152882972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr1 152882973 . G . PASS END=152882974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 152882975 . G . PASS END=152882975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 152882976 . C . PASS END=152882976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:25,0 chr1 152882977 . T . PASS END=152882978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152882979 . C . LowGQ END=152882979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,11:29:0:29:0,0,310:255,0,255:16,0 chr1 152882980 . C . PASS END=152882980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 152882981 . A . LowGQ END=152882981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,9:29:0:29:0,0,382:196,0,255:16,0 chr1 152882982 . C CAGCAGCAGGAGGGGCAGCTGGAGCTCTCTG, 66.89 PASS DP=29;MQ=62.21;FractionInformativeReads=0.345 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,6,0:0,4,0:20:99,23,0,434,30,441:255,0,255:14,0:6.6890e+01,1.9840e+01,4.5297e-02,4.3623e+02,6.1916e+01,4.4853e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,3,7:0,0,3,7 chr1 152882983 . A . PASS END=152882986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 152882987 . G . PASS END=152882988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 152882989 . A . PASS END=152882989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 152882990 . G . PASS END=152882997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 152882998 . A . PASS END=152882998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 152882999 . G . PASS END=152883001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152883002 . G . PASS END=152883002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 152883003 . G . PASS END=152883009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152883010 . C . PASS END=152883014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 152883015 . C . PASS END=152883026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 152883027 . C . PASS END=152883031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 152883032 . G . PASS END=152883054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,74,255:24,0 chr1 152883055 . G . PASS END=152883056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:42:27:0,42,923:0,42,255:22,0 chr1 152883057 . C . PASS END=152883093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,945:0,62,255:25,0 chr1 152883094 . A . PASS END=152883094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 152883095 . G . PASS END=152883096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 152883097 . T . PASS END=152883110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr1 152883111 . A . PASS END=152883111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 152883112 . T . PASS END=152883125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:30,0 chr1 152883126 . T . PASS END=152883126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 152883127 . A . PASS END=152883133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:32,0 chr1 152883134 . A . PASS END=152883134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:30,0 chr1 152883135 . C . PASS END=152883154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:33,0 chr1 152883155 . G . PASS END=152883156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 152883157 . A . PASS END=152883162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:28,0 chr1 152883163 . A . PASS END=152883163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 152883164 . T . PASS END=152883167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 152883168 . C . PASS END=152883168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 152883169 . A . PASS END=152883173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152883174 . A . PASS END=152883180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,70,255:26,0 chr1 152883181 . C . PASS END=152883181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:19,0 chr1 152883182 . A . PASS END=152883182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,843:0,34,255:19,0 chr1 152883183 . G . PASS END=152883187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:21,0 chr1 152883188 . C . PASS END=152883188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:19,0 chr1 152883189 . C . PASS END=152883189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:19,0 chr1 152883190 . C . PASS END=152883190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:19,0 chr1 152883191 . A . PASS END=152883194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:21,0 chr1 152883195 . C . PASS END=152883195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:19,0 chr1 152883196 . A . PASS END=152883196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 152883197 . G . PASS END=152883200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 152883201 . A . PASS END=152883201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 152883202 . T . PASS END=152883202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 152883203 . G . PASS END=152883203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,775:0,17,255:21,0 chr1 152883204 . G . PASS END=152883204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 152883205 . G . PASS END=152883205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152883206 . G . PASS END=152883206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 152883207 . C . PASS END=152883208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152883209 . G . PASS END=152883210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 152883211 . T . PASS END=152883211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152883212 . G . PASS END=152883212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 152883213 . A . PASS END=152883214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 152883215 . G . PASS END=152883220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,806:0,41,255:21,0 chr1 152883221 . G . PASS END=152883221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr1 152883222 . G . PASS END=152883224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:19,0 chr1 152883225 . C . PASS END=152883225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 152883226 . A . PASS END=152883227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,806:0,53,255:18,0 chr1 152883228 . C . PASS END=152883229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:19,0 chr1 152883230 . G . PASS END=152883230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 152883231 . G . PASS END=152883231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 152883232 . A . PASS END=152883232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 152883233 . G . PASS END=152883245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 152883246 . C . PASS END=152883246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 152883247 . A . PASS END=152883253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152883254 . G . PASS END=152883254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 152883255 . C . PASS END=152883255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 152883256 . A . PASS END=152883256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:19,0 chr1 152883257 . G . PASS END=152883261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,806:0,53,255:20,0 chr1 152883262 . A . PASS END=152883262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 152883263 . G . PASS END=152883265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 152883266 . G . PASS END=152883266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,728:0,19,255:18,0 chr1 152883267 . C . PASS END=152883267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 152883268 . A . PASS END=152883268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 152883269 . A . PASS END=152883269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:19,0 chr1 152883270 . C . PASS END=152883275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 152883276 . C . PASS END=152883276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,696:0,11,255:18,0 chr1 152883277 . A . PASS END=152883279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 152883280 . T . PASS END=152883280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 152883281 . G . PASS END=152883288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 152883289 . A . PASS END=152883290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 152883291 . G . PASS END=152883295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr1 152883296 . G . PASS END=152883297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 152883298 . A . PASS END=152883306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 152883307 . A . PASS END=152883307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 152883308 . C . PASS END=152883321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 152883322 . A . PASS END=152883322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 152883323 . G . PASS END=152883328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 152883329 . G . PASS END=152883343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 152883344 . G . PASS END=152883344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 152883345 . C . PASS END=152883346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:18,0 chr1 152883347 . C . PASS END=152883351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 152883352 . A . PASS END=152883353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 152883354 . G . PASS END=152883357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 152883358 . A . PASS END=152883382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,641:0,41,255:19,0 chr1 152883383 . G . PASS END=152883383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 152883384 . C . PASS END=152883386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 152883387 . C . PASS END=152883388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:17,0 chr1 152883389 . G . PASS END=152883389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 152883390 . C . PASS END=152883390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 152883391 . T . PASS END=152883391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 152883392 . G . PASS END=152883392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 152883393 . A . PASS END=152883393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 152883394 . A . PASS END=152883395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 152883396 . C . PASS END=152883397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:18,0 chr1 152883398 . G . PASS END=152883401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 152883402 . G . PASS END=152883402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:18,0 chr1 152883403 . A . PASS END=152883421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,676:0,44,255:19,0 chr1 152883422 . A . PASS END=152883422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,592:0,30,255:15,0 chr1 152883423 . A . PASS END=152883423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,645:0,16,255:15,0 chr1 152883424 . A . PASS END=152883425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 152883426 . C . PASS END=152883426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,665:0,16,255:14,0 chr1 152883427 . A . PASS END=152883427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 152883428 . C . PASS END=152883429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 152883430 . T . PASS END=152883441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:22:0,44,768:0,44,255:20,0 chr1 152883442 . A . PASS END=152883442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:19,0 chr1 152883443 . G . PASS END=152883443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 152883444 . G . PASS END=152883444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:20,0 chr1 152883445 . G . PASS END=152883448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 152883449 . G . PASS END=152883449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 152883450 . C . PASS END=152883455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 152883456 . C . PASS END=152883458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 152883459 . C . PASS END=152883463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:25,0 chr1 152883464 . G . PASS END=152883464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 152883465 . C . PASS END=152883473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,850:0,75,255:26,0 chr1 152883474 . G . PASS END=152883480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:30,0 chr1 152883481 . T . PASS END=152883481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 152883482 . G . PASS END=152883522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1096:0,83,255:33,0 chr1 152883523 . A . PASS END=152883537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 152883538 . A . PASS END=152883558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 152883559 . A . PASS END=152883568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 152883569 . C . PASS END=152883570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 152883571 . T . PASS END=152883579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr1 152883580 . A . PASS END=152883580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:22,0 chr1 152883581 . G . PASS END=152883597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:25:0,66,990:0,68,255:25,0 chr1 152883598 . A . PASS END=152883612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 152883613 . A . PASS END=152883619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 152883620 . G . PASS END=152883620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 152883621 . T . PASS END=152883621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,965:0,76,255:27,0 chr1 152883622 . T . PASS END=152883716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1090:0,80,255:37,0 chr1 152883717 . C . PASS END=152883717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,1 chr1 152883718 . A . PASS END=152883720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:32,1 chr1 152883721 . T . PASS END=152883722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:74:36:0,74,1314:0,74,255:32,1 chr1 152883723 . G . PASS END=152883746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1305:0,92,255:34,0 chr1 152883747 . C . PASS END=152883748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1180:0,60,255:32,0 chr1 152883749 . C . PASS END=152883751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 152883752 . A . PASS END=152883755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1173:0,64,255:33,0 chr1 152883756 . C . PASS END=152883762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,102,255:33,0 chr1 152883763 . T . PASS END=152883764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:32,0 chr1 152883765 . G . PASS END=152883769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1350:0,108,255:33,0 chr1 152883770 . G . PASS END=152883770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr1 152883771 . C . PASS END=152883771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 152883772 . C . PASS END=152883772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr1 152883773 . A . PASS END=152883775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 152883776 . G . PASS END=152883776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:30,0 chr1 152883777 . C . PASS END=152883986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1156:0,80,255:40,0 chr1 152883987 . C . PASS END=152884002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,929:0,62,255:25,0 chr1 152884003 . A . PASS END=152884003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr1 152884004 . G . PASS END=152884023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:24,0 chr1 152884024 . A . PASS END=152884024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 152884025 . T . PASS END=152884030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 152884031 . A . PASS END=152884031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 152921031 . A . PASS END=152921035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,505:0,45,255:15,0 chr1 152921036 . T . PASS END=152921036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 152921037 . C . PASS END=152921058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:16,0 chr1 152921059 . C . PASS END=152921067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:13,0 chr1 152921068 . A . LowGQ END=152921068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,376:8,0,255:10,0 chr1 152921069 . G . PASS END=152921069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:8,0 chr1 152921070 . C . PASS END=152921070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:27:16:0,27,405:0,31,255:9,0 chr1 152921071 . A . PASS END=152921071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:9,0 chr1 152921072 . G . LowGQ END=152921072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,357:2,0,255:8,0 chr1 152921073 . TGCTGCCCCCCACCCCAGCAGC T, 72.38 PASS DP=14;MQ=225.54;FractionInformativeReads=0.571 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,2,0:0,6,0:22:104,25,0,357,25,357:0,9,255:8,3:7.2377e+01,2.2377e+01,2.5204e-02,3.5959e+02,5.7147e+01,3.6259e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,0,8:0,0,6,2 chr1 152921074 . G . LowGQ END=152921111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:6,9:15:0:6:0,0,0:0,0,0:8,3 chr1 152921112 . C . PASS END=152921113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:4,0 chr1 152921114 . G . PASS END=152921114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 152921115 . T . PASS END=152921117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 152921118 . T . LowGQ END=152921118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152921119 . G . PASS END=152921145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 152921146 . C . PASS END=152921147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,125:3,0 chr1 152921148 . C . PASS END=152921162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:4,0 chr1 152921163 . C . LowGQ END=152921163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 152921164 . C . PASS END=152921164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 152921165 . G C, 49.78 PASS DP=4;MQ=188.16;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,4,0:1.000,0.000:4:0,0,0:0,4,0:10:87,12,0,155,12,155:155,12,0:0,0:4.9780e+01,9.5497e+00,5.1085e-01,1.5245e+02,4.4320e+01,1.5545e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,4:0,0,4,0 chr1 152921166 . C . PASS END=152921202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 152921203 . G . PASS END=152921203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 152921204 . T . PASS END=152921208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:4:0,9,135:0,12,155:3,0 chr1 152921209 . C . PASS END=152921215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,164:6,0 chr1 152921216 . G . PASS END=152921216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr1 152921217 . C . PASS END=152921236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 152921237 . G . PASS END=152921245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,247:6,0 chr1 152921246 . C . LowGQ END=152921246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:5,0 chr1 152921247 . C . PASS END=152921251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,202:6,0 chr1 152921252 . A . LowGQ END=152921252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:21,0,154:4,0 chr1 152921253 . C . PASS END=152921253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr1 152921254 . C . PASS END=152921254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 152921255 . C . PASS END=152921256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,180:5,0 chr1 152921257 . A . PASS END=152921257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 152921258 . A . PASS END=152921260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:5,0 chr1 152921261 . G . LowGQ END=152921261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 152921262 . A . PASS END=152921262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 152921263 . C . LowGQ END=152921263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152921264 . C . PASS END=152921265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 152921266 . A . LowGQ END=152921267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 152921268 . C . PASS END=152921269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 152921270 . G . LowGQ END=152921270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:24,0,118:4,0 chr1 152921271 . C . PASS END=152921272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 152921273 . T . LowGQ END=152921273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,102:16,0,118:4,0 chr1 152921274 . T . PASS END=152921274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 152921275 . G . LowGQ END=152921275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 152921276 . C . PASS END=152921276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr1 152921277 . C . LowGQ END=152921279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 152921280 . C . PASS END=152921282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 152921283 . C . PASS END=152921284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 152921285 . A . LowGQ END=152921286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:7:0,0,172:0,0,172:7,0 chr1 152921287 . C . PASS END=152921288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 152921289 . A . LowGQ END=152921289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 152921290 . A . PASS END=152921291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,227:0,24,227:8,0 chr1 152921292 . T . PASS END=152921292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 152921293 . G . PASS END=152921296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 152921297 . G . LowGQ END=152921300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:0,0,247:7,0 chr1 152921301 . C . PASS END=152921303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,294:0,24,255:8,0 chr1 152921304 . T . LowGQ END=152921304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 152921305 . G . PASS END=152921311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921312 . C . LowGQ END=152921313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:0,0,225:7,0 chr1 152921314 . A . PASS END=152921314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,221:7,0 chr1 152921315 . G . LowGQ END=152921315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr1 152921316 . T . PASS END=152921316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921317 . G . PASS END=152921317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 152921318 . C . PASS END=152921318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921319 . C . PASS END=152921319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 152921320 . C . PASS END=152921320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921321 . A . PASS END=152921321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 152921322 . C . PASS END=152921326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921327 . T . LowGQ END=152921327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,209:15,0,223:7,0 chr1 152921328 . C . PASS END=152921328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921329 . A . PASS END=152921329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 152921330 . G . PASS END=152921331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921332 . A . LowGQ END=152921335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:0,0,233:7,0 chr1 152921336 . C . PASS END=152921336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921337 . C . PASS END=152921337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 152921338 . A . PASS END=152921338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921339 . G . PASS END=152921340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,202:0,7,202:7,0 chr1 152921341 . C . PASS END=152921341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 152921342 . G . PASS END=152921342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 152921343 . T . PASS END=152921347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921348 . G . PASS END=152921348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 152921349 . C . PASS END=152921350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 152921351 . G . PASS END=152921355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr1 152921356 . A . PASS END=152921356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:3,0 chr1 152921357 . A . PASS END=152921357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:4,0 chr1 152944367 . A . PASS END=152944370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 152944371 . C . PASS END=152944373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 152944374 . C . PASS END=152944379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 152944380 . A . PASS END=152944408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:25,0 chr1 152944409 . C . PASS END=152944413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 152944414 . G . PASS END=152944415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,867:0,70,255:26,0 chr1 152944416 . G . PASS END=152944421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 152944422 . A . PASS END=152944422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 152944423 . G . PASS END=152944437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 152944438 . G . PASS END=152944441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 152944442 . C . PASS END=152944453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:29,0 chr1 152944454 . C . PASS END=152944454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:29,0 chr1 152944455 . C . PASS END=152944455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 152944456 . C . PASS END=152944457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 152944458 . C . PASS END=152944467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:30,0 chr1 152944468 . T . PASS END=152944468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr1 152944469 . C . PASS END=152944482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1093:0,80,255:32,0 chr1 152944483 . A . PASS END=152944483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1090:0,63,255:28,0 chr1 152944484 . C . PASS END=152944556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1089:0,80,255:40,0 chr1 152944557 . A . PASS END=152944593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1350:0,98,255:38,0 chr1 152944594 . C T, 143.31 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,14,0:0,18,0:93:181,96,0,1241,96,1241:255,99,0:0,0:1.4331e+02,9.3311e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,21:0,0,15,17 chr1 152944595 . A . PASS END=152944596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 152944597 . A . PASS END=152944597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:30,0 chr1 152944598 . C . PASS END=152944606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 152957707 . A . PASS END=152957710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 152957711 . A . PASS END=152957732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:13,0 chr1 152957733 . T . PASS END=152957744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:17,0 chr1 152957745 . C . PASS END=152957754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,856:0,61,255:26,0 chr1 152957755 . C . PASS END=152957758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,999:0,81,255:27,0 chr1 152957759 . A . PASS END=152957766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 152957767 . G . PASS END=152957773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 152957774 . A . PASS END=152957774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 152957775 . A . PASS END=152957794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:35,0 chr1 152957795 . A . PASS END=152957831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:36:0,92,1272:0,92,255:40,0 chr1 152957832 . C A, 178.82 PASS DP=45;MQ=134.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,16,0:0,29,0:131:217,134,0,1582,134,1596:255,135,0:0,0:1.7882e+02,1.3057e+02,0.0000e+00,4.5000e+02,1.6535e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,27:0,0,27,18 chr1 152957833 . C . PASS END=152957886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,119,1651:0,119,255:40,0 chr1 152957887 . G A, 215.53 PASS DP=57;MQ=143.86;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,27,0:0,29,0:166:253,169,0,2131,169,2131:255,168,0:0,0:2.1553e+02,1.6553e+02,0.0000e+00,4.5000e+02,2.0030e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,34:0,0,33,23 chr1 152957888 . T . PASS END=152957924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:54:0,120,1800:0,148,255:40,0 chr1 152957925 . C . PASS END=152957974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:32:0,81,1215:0,86,255:40,0 chr1 152957975 . A . PASS END=152957975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr1 152957976 . A . PASS END=152957976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 152975497 . A . PASS END=152975497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 152975498 . T . PASS END=152975514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:25,0 chr1 152975515 . A . PASS END=152975518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr1 152975519 . A . PASS END=152975520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1014:0,68,255:28,0 chr1 152975521 . A . PASS END=152975532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1078:0,87,255:38,0 chr1 152975533 . C . PASS END=152975676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:91:38:0,91,1416:0,91,255:40,0 chr1 152975677 . G . PASS END=152975677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:34,0 chr1 152975678 . T . PASS END=152975678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 152975679 . C . PASS END=152975679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1365:0,51,255:34,0 chr1 152975680 . C . PASS END=152975681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,104,255:32,0 chr1 152975682 . T . PASS END=152975682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1372:0,43,255:30,0 chr1 152975683 . G . PASS END=152975714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,99,1485:0,116,255:40,0 chr1 152975715 . C . LowGQ END=152975715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,25:53:0:53:0,0,116:255,0,255:28,0 chr1 152975716 . T . PASS END=152975738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,117,1800:0,117,255:40,0 chr1 152975739 . T . LowGQ END=152975739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,15:54:0:54:0,0,854:255,0,255:39,0 chr1 152975740 . T . PASS END=152975762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,107,1800:0,107,255:40,0 chr1 152975763 . C A,T, 202.53 PASS DP=53;MQ=126.91;FractionInformativeReads=0.868 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0,0:1.000,0.000,0.000:46:0,20,0,0:0,26,0,0:152:240,156,0,1665,134,219,1891,155,1659,1885:255,162,0:0,0:2.0253e+02,1.5253e+02,0.0000e+00,4.5000e+02,1.6618e+02,2.1918e+02,4.5000e+02,1.8724e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,26,20:0,0,16,30 chr1 152975764 . T . PASS END=152975786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,149,255:40,0 chr1 152975787 . T . PASS END=152975787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:68:54:0,68,1853:0,68,255:40,0 chr1 152975788 . T . PASS END=152975828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,105,1800:0,105,255:40,0 chr1 152975829 . A G, 221.04 PASS DP=58;MQ=199.14;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,30,0:0,28,0:171:259,174,0,2173,174,2173:255,177,0:0,0:2.2104e+02,1.7104e+02,0.0000e+00,4.5000e+02,2.0581e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,26:0,0,24,34 chr1 152975830 . C . PASS END=152975866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,141,255:40,0 chr1 152975867 . A . PASS END=152975903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,128,255:40,0 chr1 152975904 . A . PASS END=152975940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:45:0,83,1576:0,83,255:40,0 chr1 152975941 . C G, 178.50 PASS DP=45;MQ=249.93;FractionInformativeReads=0.978 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,23,0:0,21,0:128:216,132,0,1618,132,1625:255,119,0:0,0:1.7850e+02,1.2850e+02,0.0000e+00,4.5000e+02,1.6328e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,28:0,0,27,17 chr1 152975942 . T . PASS END=152975972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,102,255:39,0 chr1 152975973 . A . PASS END=152975978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr1 152975979 . A . PASS END=152976006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,900:0,72,255:25,0 chr1 153004822 . A . PASS END=153004822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 153004823 . T . PASS END=153004832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr1 153004833 . G . PASS END=153004833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 153004834 . C . PASS END=153004847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1124:0,87,255:35,0 chr1 153004848 . T C, 150.57 PASS DP=35;MQ=207.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:101:188,104,0,288,288,288:255,105,0:0,0:1.5057e+02,1.0057e+02,0.0000e+00,2.8534e+02,3.2011e+02,2.8835e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,24,11:0,0,20,15:153004848 chr1 153004849 . T . PASS END=153004852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1319:0,105,255:37,0 chr1 153004853 . C T, 153.42 PASS DP=37;MQ=202.60;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,37,0:1.000,0.000:37:0,17,0:0,20,0:103:191,106,0,291,291,291:255,111,0:0,0:1.5342e+02,1.0342e+02,0.0000e+00,2.8819e+02,3.2296e+02,2.9120e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,26,11:0,0,20,17:153004848 chr1 153004854 . C . PASS END=153004862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1261:0,111,255:39,0 chr1 153004863 . T . PASS END=153004863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1088:0,69,255:37,0 chr1 153004864 . C . PASS END=153004893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1225:0,84,255:40,0 chr1 153004894 . T . PASS END=153004894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr1 153004895 . G . PASS END=153004895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1405:0,74,255:37,0 chr1 153004896 . C . PASS END=153004899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1499:0,90,255:38,0 chr1 153004900 . C . PASS END=153004901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:38,0 chr1 153004902 . T . PASS END=153004902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1327:0,51,255:36,0 chr1 153004903 . C . PASS END=153004907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1452:0,87,255:38,0 chr1 153004908 . T . PASS END=153004908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1352:0,57,255:31,0 chr1 153004909 . C . PASS END=153004945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:40:0,84,1346:0,84,255:40,0 chr1 153004946 . A . PASS END=153004982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:43:0,113,1559:0,113,255:40,0 chr1 153004983 . C T, 178.72 PASS DP=45;MQ=100.05;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,22,0:0,23,0:132:216,135,0,1675,135,1675:255,135,0:0,0:1.7872e+02,1.3152e+02,0.0000e+00,4.5000e+02,1.6629e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,26:0,0,22,23 chr1 153004984 . G . PASS END=153005020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,113,1582:0,113,255:40,0 chr1 153005021 . C . PASS END=153005082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1215:0,84,255:40,0 chr1 153005083 . C . PASS END=153005091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 153012604 . T . PASS END=153012822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:41:0,114,1710:0,123,255:40,0 chr1 153028993 . T . PASS END=153029099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:48:0,120,1800:0,128,255:40,0 chr1 153029100 . G . PASS END=153029136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1350:0,114,255:40,0 chr1 153029137 . C T, 43.72 PASS DP=41;MQ=59.50;MQRankSum=-0.274;ReadPosRankSum=2.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,20,0:0.488,0.000:41:7,9,0:14,11,0:42:78,0,44,707,705,1412:255,0,255:16,0:4.3720e+01,2.6845e-04,4.7125e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,7,13:13,8,12,8 chr1 153029138 . T . PASS END=153029167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:32,0 chr1 153029168 . G . PASS END=153029174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 153029175 . G . PASS END=153029211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,730:0,66,255:26,0 chr1 153043097 . T . PASS END=153043207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:36:0,88,1321:0,88,255:40,0 chr1 153043208 . G . PASS END=153043208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 153043209 . C . PASS END=153043213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:27,0 chr1 153043214 . C . PASS END=153043221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,99,255:26,0 chr1 153043222 . A . PASS END=153043224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153043225 . T . PASS END=153043225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153043226 . C . PASS END=153043227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153043228 . G . PASS END=153043237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 153043238 . T . PASS END=153043257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:18,0 chr1 153043258 . T . PASS END=153043258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 153043259 . G . PASS END=153043260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 153043261 . G . PASS END=153043284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr1 153043285 . G . PASS END=153043289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 153043290 . T . PASS END=153043294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 153043295 . C . PASS END=153043302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr1 153043303 . G . PASS END=153043315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:3:0,9,108:0,9,108:3,0 chr1 153066009 . T . PASS END=153066224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:66:0,120,1800:0,175,255:40,0 chr1 153066225 . C . PASS END=153066227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:85:0,120,1800:0,228,255:40,0 chr1 153084991 . T . PASS END=153085209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:93:40:0,93,1395:0,113,255:40,0 chr1 153122365 . T . PASS END=153122582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:80:32:0,80,1125:0,80,255:40,0 chr1 153122583 . A . PASS END=153122586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,120,1800:0,139,255:40,0 chr1 153177184 . A . PASS END=153177200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,590:0,51,255:19,0 chr1 153177201 . A . PASS END=153177215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,707:0,63,255:22,0 chr1 153177216 . C . PASS END=153177225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:31,0 chr1 153177226 . G . PASS END=153177226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 153177227 . A . PASS END=153177227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 153177228 . G . PASS END=153177228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 153177229 . C . PASS END=153177289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,946:0,95,255:35,0 chr1 153177290 . T . PASS END=153177290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr1 153177291 . A . PASS END=153177306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:35,0 chr1 153177307 . C . PASS END=153177307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:32,0 chr1 153177308 . G . PASS END=153177309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1270:0,92,255:32,0 chr1 153177310 . T . PASS END=153177310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 153177311 . G . PASS END=153177336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1122:0,88,255:34,0 chr1 153177337 . T . PASS END=153177337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:29,0 chr1 153177338 . G . PASS END=153177356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1125:0,82,255:33,0 chr1 153177357 . C . PASS END=153177357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:32,0 chr1 153177358 . C . PASS END=153177395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:32,0 chr1 153177396 . C . PASS END=153177455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,799:0,66,255:26,0 chr1 153177456 . A . PASS END=153177470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:19:0,47,720:0,47,255:18,0 chr1 153177471 . C . PASS END=153177471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 153177472 . C . PASS END=153177475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 153177476 . A . PASS END=153177480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:13,0 chr1 153190621 . A . PASS END=153190638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1203:0,99,255:35,0 chr1 153190639 . C . PASS END=153190639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:34,0 chr1 153190640 . A . PASS END=153190646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1349:0,105,255:36,0 chr1 153190647 . G . PASS END=153190647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr1 153190648 . C . PASS END=153190918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:36:0,89,1224:0,89,255:40,0 chr1 153190919 . T . PASS END=153190919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1122:0,77,255:35,0 chr1 153190920 . T . PASS END=153190957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:30:0,87,1263:0,89,255:36,0 chr1 153190958 . G . PASS END=153190958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 153190959 . C . PASS END=153190961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153190962 . G . PASS END=153190971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 153233426 . A . PASS END=153233544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:3,0 chr1 153233545 . C . PASS END=153233551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 153233552 . G . PASS END=153233577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 153233578 . C . PASS END=153233579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 153233580 . G . PASS END=153233580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 153233581 . C . PASS END=153233581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 153233582 . T C, 0.09 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:5,0,0:1,1,0:17:18,0,50,36,207,243:18,0,189:5,0:8.6364e-02,1.7059e+01,7.0059e+01,5.2912e+01,2.5851e+02,2.6259e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,0,1:3,3,1,0 chr1 153233583 . A . PASS END=153233589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 153233590 . C . PASS END=153233590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 153233591 . G . PASS END=153233594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr1 153233595 . G . PASS END=153233595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 153233596 . T . PASS END=153233600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr1 153233601 . A . PASS END=153233601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 153233602 . C . PASS END=153233604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 153233605 . T . PASS END=153233605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 153233606 . G . PASS END=153233619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr1 153233620 . C . PASS END=153233643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 153233644 . C . PASS END=153233644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 153233645 . G . PASS END=153233651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 153233652 . G . PASS END=153233658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:12,0 chr1 153233659 . A . PASS END=153233659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 153233660 . G . PASS END=153233661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 153233662 . C . PASS END=153233662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 153233663 . T . PASS END=153233690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 153233691 . A . PASS END=153233691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,313:0,5,255:10,0 chr1 153233692 . G . PASS END=153233713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:11,0 chr1 153233714 . T . PASS END=153233722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 153233723 . G . PASS END=153233726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 153233727 . C . PASS END=153233728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 153233729 . G . PASS END=153233733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 153233734 . T . PASS END=153233734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 153233735 . T . PASS END=153233743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 153233744 . G . PASS END=153233744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 153233745 . G . PASS END=153233746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 153233747 . G . PASS END=153233747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 153233748 . G . PASS END=153233752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 153233753 . G . PASS END=153233753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 153233754 . G . PASS END=153233754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 153233755 . C . PASS END=153233756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 153233757 . C . PASS END=153233757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 153233758 . C . PASS END=153233758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 153233759 . G . PASS END=153233759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 153233760 . G . LowGQ END=153233760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 153233761 . C . PASS END=153233761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 153233762 . T . LowGQ END=153233762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,279:14,0,255:8,0 chr1 153233763 . G . PASS END=153233763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 153233764 . C . PASS END=153233764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:10,0 chr1 153233765 . T . PASS END=153233765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 153233766 . T . LowGQ END=153233766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,255:28,0,255:8,0 chr1 153233767 . C . PASS END=153233768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 153233769 . C . PASS END=153233769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:11,0 chr1 153233770 . C . PASS END=153233770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 153233771 . T . LowGQ END=153233771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:10,0 chr1 153233772 . C . PASS END=153233772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 153233773 . C . LowGQ END=153233774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,371:0,0,255:10,0 chr1 153233775 . G . PASS END=153233775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr1 153233776 . T . LowGQ END=153233778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,311:0,0,255:9,0 chr1 153233779 . C . PASS END=153233779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 153233780 . G . PASS END=153233781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:16:11:0,16,349:0,16,255:9,0 chr1 153233782 . C . PASS END=153233782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:9,0 chr1 153233783 . G . PASS END=153233783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 153233784 . G . LowGQ END=153233784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:8,0 chr1 153233785 . C . PASS END=153233785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 153233786 . T . PASS END=153233786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 153233787 . C . PASS END=153233787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 153233788 . C . PASS END=153233788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 153233789 . T . PASS END=153233789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 153233790 . C . PASS END=153233792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 153233793 . G . LowGQ END=153233793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:9,0 chr1 153233794 . G . PASS END=153233794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 153233795 . G . PASS END=153233796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 153233797 . C . PASS END=153233802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,405:0,20,255:9,0 chr1 153233803 . C . PASS END=153233803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 153233804 . G . PASS END=153233805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 153233806 . C . PASS END=153233806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 153233807 . T . LowGQ END=153233807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:7,0 chr1 153233808 . G . PASS END=153233809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 153233810 . T . LowGQ END=153233811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,308:0,0,255:9,0 chr1 153233812 . C . PASS END=153233812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 153233813 . T . PASS END=153233814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 153233815 . C . PASS END=153233815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 153233816 . A . LowGQ END=153233816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,257:37,0,255:8,0 chr1 153233817 . G . PASS END=153233818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,324:0,14,255:9,0 chr1 153233819 . G . PASS END=153233820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 153233821 . T . PASS END=153233822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 153233823 . G . PASS END=153233824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 153233825 . G . PASS END=153233825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 153233826 . G . PASS END=153233827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 153233828 . G . PASS END=153233829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 153233830 . C . PASS END=153233831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 153233832 . C . LowGQ END=153233832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:11,0 chr1 153233833 . C . PASS END=153233834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:22:13:0,22,418:0,22,255:13,0 chr1 153233835 . C . PASS END=153233835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 153233836 . C . PASS END=153233836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 153233837 . G . PASS END=153233838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153233839 . G . PASS END=153233839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 153233840 . G . PASS END=153233842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr1 153233843 . G . PASS END=153233843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 153233844 . G . PASS END=153233845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 153233846 . T . PASS END=153233846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 153233847 . C . PASS END=153233851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 153233852 . T . PASS END=153233852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 153233853 . G . PASS END=153233854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 153233855 . T . PASS END=153233855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 153233856 . T . PASS END=153233867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:18,0 chr1 153233868 . G . PASS END=153233868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 153233869 . C . PASS END=153233874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 153233875 . C . PASS END=153233875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 153233876 . T . PASS END=153233881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,623:0,54,255:18,0 chr1 153233882 . G . PASS END=153233882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 153233883 . G . PASS END=153233883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 153233884 . C . PASS END=153233885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 153233886 . A . PASS END=153233912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,629:0,40,255:17,0 chr1 153233913 . G . PASS END=153233913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 153233914 . C . PASS END=153233918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,627:0,40,255:18,0 chr1 153233919 . C . PASS END=153233919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 153233920 . T . PASS END=153233923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 153233924 . G . PASS END=153233924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 153233925 . G . PASS END=153233940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,653:0,54,255:18,0 chr1 153233941 . C . PASS END=153233941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 153233942 . G . PASS END=153233942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 153233943 . G . PASS END=153233943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 153233944 . C . PASS END=153233945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 153233946 . C . PASS END=153233946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:13,0 chr1 153233947 . C . PASS END=153233947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153233948 . G . PASS END=153233948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 153233949 . G . PASS END=153233949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153233950 . C . PASS END=153233950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 153233951 . T . PASS END=153233957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 153233958 . C . PASS END=153233958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 153233959 . C . PASS END=153233959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 153233960 . A . PASS END=153233960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 153233961 . G . PASS END=153233962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153233963 . G . PASS END=153233963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 153233964 . G . PASS END=153233964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153233965 . C . PASS END=153233965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 153233966 . G . PASS END=153233968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153233969 . G . PASS END=153233969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 153233970 . G . PASS END=153233971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153233972 . G . PASS END=153233972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 153233973 . G . PASS END=153233973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 153233974 . C . PASS END=153233974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 153233975 . G . PASS END=153233976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 153233977 . C . PASS END=153233977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 153233978 . T . PASS END=153233978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153233979 . C . PASS END=153233981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 153233982 . T . PASS END=153233982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153233983 . C . PASS END=153233983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 153233984 . T . PASS END=153233984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 153233985 . G . PASS END=153233985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 153233986 . C . PASS END=153233991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 153233992 . C . PASS END=153233992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 153233993 . T . PASS END=153233993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153233994 . C . PASS END=153233994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 153233995 . T . PASS END=153233996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153233997 . G . PASS END=153233997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 153233998 . C . PASS END=153233998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153233999 . G . PASS END=153233999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 153234000 . G . PASS END=153234000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153234001 . C . PASS END=153234004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr1 153234005 . T . PASS END=153234005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:13,0 chr1 153234006 . C . PASS END=153234008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153234009 . G . PASS END=153234009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 153234010 . C . PASS END=153234010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153234011 . T . PASS END=153234011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:13,0 chr1 153234012 . G . PASS END=153234012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 153234013 . C . PASS END=153234013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 153234014 . G . PASS END=153234015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 153234016 . C . PASS END=153234018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 153234019 . A . PASS END=153234019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 153234020 . G . PASS END=153234020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 153234021 . G . PASS END=153234021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 153234022 . C . PASS END=153234024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 153234025 . C . PASS END=153234025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 153234026 . T . PASS END=153234034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 153234035 . A . PASS END=153234035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 153234036 . G . PASS END=153234038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 153234039 . G . PASS END=153234039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234040 . C . PASS END=153234040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 153234041 . T . PASS END=153234057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,421:0,31,255:12,0 chr1 153234058 . G . PASS END=153234058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,380:0,5,255:11,0 chr1 153234059 . C . PASS END=153234059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 153234060 . A . PASS END=153234061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 153234062 . C . PASS END=153234062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 153234063 . A . LowGQ END=153234064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,318:0,0,255:11,0 chr1 153234065 . G . PASS END=153234065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 153234066 . T . PASS END=153234066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 153234067 . C . PASS END=153234067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153234068 . A . PASS END=153234068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 153234069 . C . PASS END=153234071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153234072 . A . PASS END=153234072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 153234073 . G . PASS END=153234076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 153234077 . T . PASS END=153234077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 153234078 . C . PASS END=153234079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 153234080 . T . LowGQ END=153234080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr1 153234081 . G . PASS END=153234081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 153234082 . C . PASS END=153234082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 153234083 . G . PASS END=153234083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 153234084 . C . PASS END=153234085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 153234086 . C . PASS END=153234086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 153234087 . C . LowGQ END=153234089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,371:0,0,255:12,0 chr1 153234090 . A . PASS END=153234092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 153234093 . C . LowGQ END=153234093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 153234094 . G . PASS END=153234095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 153234096 . G . LowGQ END=153234096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 153234097 . T . PASS END=153234097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 153234098 . T . PASS END=153234098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,363:0,6,255:11,0 chr1 153234099 . A . PASS END=153234099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 153234100 . C . PASS END=153234103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153234104 . G . PASS END=153234104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 153234105 . G . PASS END=153234105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153234106 . G . PASS END=153234106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 153234107 . G . PASS END=153234107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153234108 . G . PASS END=153234108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 153234109 . G . PASS END=153234109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153234110 . T . PASS END=153234111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,449:0,23,255:12,0 chr1 153234112 . G . LowGQ END=153234112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr1 153234113 . T . PASS END=153234114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 153234115 . C . PASS END=153234116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 153234117 . G . LowGQ END=153234117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,360:0,0,255:11,0 chr1 153234118 . C . PASS END=153234118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 153234119 . G . PASS END=153234120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 153234121 . C . PASS END=153234121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:12,0 chr1 153234122 . G . PASS END=153234123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234124 . C . PASS END=153234124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:14,0 chr1 153234125 . G . PASS END=153234127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr1 153234128 . A . PASS END=153234128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 153234129 . G . PASS END=153234129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 153234130 . C . PASS END=153234130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:13,0 chr1 153234131 . G . PASS END=153234131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 153234132 . G . PASS END=153234132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 153234133 . C . PASS END=153234134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 153234135 . G . PASS END=153234135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 153234136 . A . PASS END=153234137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 153234138 . G . PASS END=153234138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 153234139 . C . PASS END=153234139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 153234140 . G . PASS END=153234141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 153234142 . C . PASS END=153234143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 153234144 . G . PASS END=153234145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 153234146 . T . PASS END=153234149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153234150 . C . PASS END=153234152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 153234153 . G . PASS END=153234153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:12,0 chr1 153234154 . C . PASS END=153234155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 153234156 . G . PASS END=153234158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153234159 . G . PASS END=153234161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 153234162 . G . PASS END=153234162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234163 . C . PASS END=153234163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153234164 . G . PASS END=153234166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234167 . G . PASS END=153234167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:13,0 chr1 153234168 . G . PASS END=153234168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 153234169 . G . PASS END=153234169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234170 . A . PASS END=153234170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 153234171 . G . PASS END=153234171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234172 . C . PASS END=153234172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 153234173 . T . PASS END=153234176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 153234177 . G . PASS END=153234177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 153234178 . C . PASS END=153234178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 153234179 . T . PASS END=153234181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 153234182 . G . PASS END=153234182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 153234183 . G . PASS END=153234194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 153234195 . C . PASS END=153234195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 153234196 . C . PASS END=153234204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 153234205 . C . PASS END=153234205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234206 . A . PASS END=153234207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 153234208 . C . PASS END=153234209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153234210 . G . PASS END=153234210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 153234211 . C . PASS END=153234297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:17,0 chr1 153234298 . T . PASS END=153234298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 153234299 . G . PASS END=153234299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 153234300 . G . PASS END=153234307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153234308 . G . PASS END=153234310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153234311 . C . PASS END=153234311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 153234312 . C . PASS END=153234320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 153234321 . A . PASS END=153234321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 153234322 . C . PASS END=153234329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 153234330 . A . PASS END=153234330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 153234331 . G . PASS END=153234351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 153234352 . G . LowGQ END=153234352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:9,0 chr1 153234353 . C . PASS END=153234353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 153234354 . C . PASS END=153234360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 153234361 . A . PASS END=153234361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 153234362 . T . PASS END=153234364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 153270432 . T . PASS END=153270454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1227:0,99,255:36,0 chr1 153270455 . T . PASS END=153270455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:35,0 chr1 153270456 . G . PASS END=153270555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:34:0,87,1305:0,95,255:40,0 chr1 153270556 . G . PASS END=153270558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 153270559 . C . PASS END=153270567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:30,0 chr1 153270568 . A . PASS END=153270568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 153270569 . G . PASS END=153270574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 153270575 . G . PASS END=153270610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 153271589 . C . PASS END=153271702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:38:0,93,1331:0,98,255:40,0 chr1 153271703 . G . PASS END=153271703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:36,0 chr1 153271704 . G . PASS END=153271707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1304:0,84,255:34,0 chr1 153274885 . T . PASS END=153274885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 153274886 . G . PASS END=153274886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 153274887 . A . PASS END=153274892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr1 153274893 . A . PASS END=153274895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:29,0 chr1 153274896 . G . PASS END=153274905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,89,255:30,0 chr1 153274906 . T . PASS END=153274906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 153274907 . T . PASS END=153274908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:31,0 chr1 153274909 . C . PASS END=153274909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 153274910 . G . PASS END=153274952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1147:0,80,255:39,0 chr1 153274953 . G . PASS END=153274953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr1 153274954 . C . PASS END=153274982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:92:36:0,92,1294:0,92,255:35,0 chr1 153274983 . A . PASS END=153274983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1229:0,77,255:33,0 chr1 153274984 . G . PASS END=153275069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1305:0,82,255:40,0 chr1 153275070 . G . PASS END=153275070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153275071 . A . PASS END=153275073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 153275074 . T . PASS END=153275081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 153275082 . A . PASS END=153275083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153276333 . C . PASS END=153276339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,612:0,48,255:19,0 chr1 153276340 . G . PASS END=153276349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,743:0,60,255:21,0 chr1 153276350 . G . PASS END=153276350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 153276351 . G . PASS END=153276378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,764:0,66,255:26,0 chr1 153276379 . T . PASS END=153276381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 153276382 . C . PASS END=153276384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 153276385 . A . PASS END=153276388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153276389 . A . PASS END=153276395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 153276396 . G . PASS END=153276399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 153276400 . A . PASS END=153276400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 153276401 . T . PASS END=153276403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 153276404 . C . PASS END=153276404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 153276405 . T . PASS END=153276410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153276411 . A . PASS END=153276431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 153276432 . C . PASS END=153276432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr1 153276433 . A . PASS END=153276453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,809:0,69,255:25,0 chr1 153276454 . A . PASS END=153276468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 153276469 . A . PASS END=153276478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 153276479 . C . PASS END=153276485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 153277423 . C . PASS END=153277428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1056:0,84,255:29,0 chr1 153277429 . T . PASS END=153277429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,970:0,56,255:28,0 chr1 153277430 . A . PASS END=153277439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1116:0,84,255:29,0 chr1 153277440 . A . PASS END=153277440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 153277441 . A . PASS END=153277447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 153277448 . G . PASS END=153277448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 153277449 . C . PASS END=153277487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1105:0,80,255:37,0 chr1 153277488 . T . PASS END=153277488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:33,0 chr1 153277489 . G . PASS END=153277501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1332:0,92,255:36,0 chr1 153277502 . A . PASS END=153277532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,947:0,64,255:26,0 chr1 153277533 . A . PASS END=153277533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:23,0 chr1 153277534 . C . PASS END=153277539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 153277540 . A . PASS END=153277540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 153277541 . G . PASS END=153277541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 153279542 . T . PASS END=153279567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:43:17:0,43,599:0,43,255:19,0 chr1 153279568 . G . PASS END=153279572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 153279573 . A . PASS END=153279573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 153279574 . G . PASS END=153279590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 153279591 . A . PASS END=153279591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 153279592 . C . PASS END=153279597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153279598 . C . PASS END=153279598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 153279599 . A . PASS END=153279612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,799:0,63,255:22,0 chr1 153279613 . A . PASS END=153279613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 153279614 . A . PASS END=153279633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,703:0,66,255:23,0 chr1 153279634 . C . PASS END=153279634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 153279635 . A . PASS END=153279638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 153279639 . C . PASS END=153279639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 153279640 . T . PASS END=153279648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 153279649 . G . PASS END=153279658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 153279659 . A . PASS END=153279670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,659:0,51,255:17,0 chr1 153279671 . G . PASS END=153279678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153279679 . C . PASS END=153279679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 153279680 . A . PASS END=153279683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 153279684 . G . PASS END=153279689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153279690 . T . PASS END=153279691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153279692 . C . PASS END=153279695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153279696 . C T, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.200;ReadPosRankSum=0.271;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,10,0:0.625,0.000:16:1,6,0:5,4,0:47:85,0,48,329,215,543:255,0,185:6,0:5.0000e+01,7.8176e-05,5.0983e+01,3.2889e+02,2.4933e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,3,7:2,4,5,5 chr1 153279697 . G . PASS END=153279698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153279699 . G . PASS END=153279706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:11,0 chr1 153279707 . G . PASS END=153279711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:12:0,24,360:0,36,255:9,0 chr1 153279712 . C . LowGQ END=153279712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:8,0 chr1 153279713 . C . PASS END=153279719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 153279720 . T . PASS END=153279720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 153279721 . G . PASS END=153279733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 153279734 . G . PASS END=153279743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 153280987 . C . PASS END=153280988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:25:0,67,931:0,67,255:27,0 chr1 153280989 . T . PASS END=153281014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:29:0,83,1056:0,83,255:33,0 chr1 153281015 . G . PASS END=153281015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:34,0 chr1 153281016 . A . PASS END=153281016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1203:0,91,255:35,0 chr1 153281017 . T . PASS END=153281017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:35,0 chr1 153281018 . G . PASS END=153281018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1329:0,108,255:36,0 chr1 153281019 . C . PASS END=153281019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1149:0,61,255:34,0 chr1 153281020 . T . PASS END=153281040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1208:0,84,255:37,0 chr1 153281041 . T . PASS END=153281041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1213:0,56,255:35,0 chr1 153281042 . C . PASS END=153281042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr1 153281043 . T . PASS END=153281058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,81,255:37,0 chr1 153281059 . C . PASS END=153281059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:44:38:0,44,1162:0,44,255:35,0 chr1 153281060 . T . PASS END=153281073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:33:0,90,1169:0,94,255:35,0 chr1 153281074 . A . PASS END=153281074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1038:0,68,255:29,0 chr1 153281075 . G . PASS END=153281077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1097:0,82,255:31,0 chr1 153281078 . G . PASS END=153281078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1009:0,30,255:26,0 chr1 153281079 . A . PASS END=153281080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 153281081 . C . PASS END=153281081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1033:0,52,255:27,0 chr1 153281082 . T . PASS END=153281084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 153281085 . G . PASS END=153281088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr1 153281089 . A . PASS END=153281089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 153281090 . A . PASS END=153281090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 153281091 . T . PASS END=153281091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,883:0,51,255:27,0 chr1 153281092 . C . PASS END=153281094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 153283087 . C . PASS END=153283101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,947:0,68,255:26,0 chr1 153283102 . C . PASS END=153283102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153283103 . C . PASS END=153283103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 153283104 . A . PASS END=153283108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1094:0,84,255:30,0 chr1 153283109 . G . PASS END=153283131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,61,255:26,0 chr1 153283132 . G . PASS END=153283132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 153283133 . C . PASS END=153283134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 153283135 . T . PASS END=153283135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 153283136 . C . PASS END=153283141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 153303034 . T . PASS END=153303113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1288:0,90,255:40,0 chr1 153303243 . T . PASS END=153303251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 153303252 . G A, 48.66 PASS DP=26;MQ=246.01;MQRankSum=3.633;ReadPosRankSum=2.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:8,7,0:7,4,0:47:83,0,50,393,536,930:255,0,255:15,0:4.8659e+01,8.0765e-05,5.3000e+01,3.9346e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,5,6:5,10,5,6 chr1 153303253 . A . PASS END=153303270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 153303271 . A . PASS END=153303289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1072:0,83,255:32,0 chr1 153303290 . G . PASS END=153303356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:33,0 chr1 153303357 . T . PASS END=153303393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,868:0,61,255:26,0 chr1 153303394 . T . PASS END=153303394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 153303395 . C . PASS END=153303397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 153303398 . G . PASS END=153303410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 153303411 . G . PASS END=153303421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,41,255:13,0 chr1 153309657 . C . PASS END=153309662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 153309663 . A . PASS END=153309663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 153309664 . G . PASS END=153309681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,807:0,62,255:26,0 chr1 153309682 . G . PASS END=153309694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 153309695 . T . PASS END=153309695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 153309696 . C . PASS END=153309698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 153309699 . C . PASS END=153309707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 153309708 . G . PASS END=153309715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 153309716 . G . PASS END=153309738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 153309739 . C . PASS END=153309739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 153309740 . C . PASS END=153309746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 153309747 . A . PASS END=153309747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 153309748 . A . PASS END=153309768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,856:0,63,255:24,0 chr1 153309769 . C . PASS END=153309775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:17,0 chr1 153312857 . T . PASS END=153312861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr1 153312862 . A . PASS END=153312862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 153312863 . C . PASS END=153312866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,860:0,72,255:24,0 chr1 153312867 . T . PASS END=153312867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 153312868 . G . PASS END=153312868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 153312869 . T . PASS END=153312869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 153312870 . C . PASS END=153312872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,876:0,72,255:24,0 chr1 153312873 . A . PASS END=153312873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 153312874 . T . PASS END=153312883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 153312884 . C . PASS END=153312887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 153312888 . C . PASS END=153312891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 153312892 . G . PASS END=153312892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153312893 . T . PASS END=153312893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 153312894 . A . PASS END=153313006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:27:0,81,948:0,81,255:40,0 chr1 153313007 . T . PASS END=153313040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:33,0 chr1 153313041 . C . PASS END=153313043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 153313044 . C T, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=2.990;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,15,0:0.517,0.000:29:7,7,0:7,8,0:48:85,0,50,536,501,1037:255,0,255:11,0:5.0000e+01,6.5492e-05,5.2928e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,3,12:8,6,11,4 chr1 153313045 . G . PASS END=153313052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:24,0 chr1 153313053 . A . PASS END=153313055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 153314103 . C . PASS END=153314106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1039:0,71,255:27,0 chr1 153314107 . C . PASS END=153314191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:30:0,83,1135:0,83,255:38,0 chr1 153314192 . T . PASS END=153314192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 153314193 . T . PASS END=153314238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1294:0,89,255:37,0 chr1 153314239 . A . PASS END=153314251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,81,255:26,0 chr1 153314252 . T . PASS END=153314255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:26:0,51,765:0,78,255:18,0 chr1 153315566 . C . PASS END=153315576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:30,0 chr1 153315577 . C . PASS END=153315577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 153315578 . C . PASS END=153315578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 153315579 . A G, 50.00 PASS DP=32;MQ=247.92;MQRankSum=3.743;ReadPosRankSum=1.141;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,18,0:0.581,0.000:31:5,3,0:8,15,0:48:85,0,48,643,453,1096:255,0,255:13,0:5.0000e+01,7.6105e-05,5.1237e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,8,10:5,8,11,7 chr1 153315580 . A . PASS END=153315588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1095:0,86,255:34,0 chr1 153315589 . A . PASS END=153315589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr1 153315590 . A . PASS END=153315616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:34:0,85,1164:0,85,255:40,0 chr1 153315617 . G . PASS END=153315684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:40:0,88,1443:0,88,255:40,0 chr1 153317645 . T . PASS END=153317655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:26,0 chr1 153317656 . A . PASS END=153317732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1031:0,81,255:40,0 chr1 153317733 . A . PASS END=153317733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1381:0,71,255:38,0 chr1 153317734 . C . PASS END=153317848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1215:0,96,255:40,0 chr1 153317849 . G . PASS END=153317858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,1035:0,66,255:26,0 chr1 153318578 . C . PASS END=153318667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,129,255:40,0 chr1 153320360 . C . PASS END=153320363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1336:0,100,255:37,0 chr1 153320364 . G . PASS END=153320400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1398:0,104,255:40,0 chr1 153320401 . G A, 49.74 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=3.981;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:9,13,0:12,6,0:48:85,0,50,643,751,1393:255,0,255:20,0:4.9740e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,9,10:12,9,11,8 chr1 153320402 . G . PASS END=153320408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1410:0,87,255:36,0 chr1 153320755 . C . PASS END=153320755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,252,255:40,0 chr1 153330760 . A . PASS END=153330865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:38:0,90,1357:0,90,255:40,0 chr1 153330866 . A . PASS END=153330866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:35,0 chr1 153330867 . A . PASS END=153330909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:36,0 chr1 153333120 . A . PASS END=153333126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 153333127 . A . PASS END=153333127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 153333128 . T . PASS END=153333134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:23,0 chr1 153333135 . G . PASS END=153333136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 153333137 . A . PASS END=153333140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,821:0,69,255:25,0 chr1 153333141 . G . PASS END=153333142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 153333143 . C . PASS END=153333143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 153333144 . A . PASS END=153333231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:29:0,80,1072:0,80,255:40,0 chr1 153333232 . G . PASS END=153333232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:32,0 chr1 153333233 . G . PASS END=153333235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 153333236 . C . PASS END=153333236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:31,0 chr1 153333237 . T . PASS END=153333269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr1 153333270 . C . PASS END=153333276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 153333277 . A . PASS END=153333292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:44:19:0,44,712:0,44,255:19,0 chr1 153333293 . C . PASS END=153333300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:21,0 chr1 153333301 . A . PASS END=153333314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 153346303 . C . PASS END=153346305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153346306 . C . PASS END=153346308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 153346309 . T . PASS END=153346309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:28,0 chr1 153346310 . T . PASS END=153346443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:30:0,83,1088:0,83,255:40,0 chr1 153346931 . C . PASS END=153346940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,687:0,63,255:21,0 chr1 153346941 . T . PASS END=153346941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr1 153346942 . T . PASS END=153346969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:25,0 chr1 153346970 . C . PASS END=153346973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 153346974 . T . PASS END=153346974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153346975 . C . PASS END=153347008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:37,0 chr1 153347009 . A . PASS END=153347009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:34,0 chr1 153347010 . A . PASS END=153347052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1082:0,82,255:35,0 chr1 153347053 . C . PASS END=153347053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 153347054 . T . PASS END=153347059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153347060 . T . PASS END=153347061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,887:0,70,255:27,0 chr1 153347062 . T . PASS END=153347062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153347063 . T . PASS END=153347068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 153362579 . C . PASS END=153362583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 153362584 . C . PASS END=153362584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153362585 . T . PASS END=153362585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 153362586 . T . PASS END=153362589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 153362590 . G . PASS END=153362590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 153362591 . G . PASS END=153362591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153362592 . C . PASS END=153362592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 153362593 . T . PASS END=153362593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr1 153362594 . T . PASS END=153362594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153362595 . T . PASS END=153362596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153362597 . T . PASS END=153362599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153362600 . A . PASS END=153362601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,1008:0,68,255:26,0 chr1 153362602 . G . PASS END=153362604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153362605 . T . PASS END=153362605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 153362606 . T . PASS END=153362608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 153362609 . T . PASS END=153362609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr1 153362610 . T . PASS END=153362611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 153362612 . G . PASS END=153362612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 153362613 . T . PASS END=153362617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153362618 . T . PASS END=153362618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,990:0,68,255:26,0 chr1 153362619 . G . PASS END=153362619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153362620 . C . PASS END=153362620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 153362621 . C . PASS END=153362660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1147:0,80,255:33,0 chr1 153362661 . T . PASS END=153362662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:27,0 chr1 153362663 . A . PASS END=153362663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153362664 . A . PASS END=153362664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 153362665 . C . PASS END=153362668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 153362669 . A . PASS END=153362669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 153362670 . C . PASS END=153362683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1202:0,96,255:32,0 chr1 153362684 . A . PASS END=153362694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 153362695 . T . PASS END=153362711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1100:0,87,255:29,0 chr1 153362712 . C . PASS END=153362719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:26,0 chr1 153362871 . C . PASS END=153363050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:97:44:0,97,1643:0,97,255:40,0 chr1 153363517 . C . PASS END=153363549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:45:0,86,1590:0,86,255:40,0 chr1 153390559 . A . PASS END=153390699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:82:44:0,82,1401:0,82,255:40,0 chr1 153391621 . G . PASS END=153391621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 153391622 . A . PASS END=153391625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,93,255:32,0 chr1 153391626 . A . PASS END=153391627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:31,0 chr1 153391628 . A . PASS END=153391767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1085:0,80,255:40,0 chr1 153391768 . T . PASS END=153391768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr1 153391769 . C . PASS END=153391769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,126,255:27,0 chr1 153391770 . T . PASS END=153391777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:28:0,63,945:0,84,255:26,0 chr1 153391778 . G . PASS END=153391785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,75,255:19,0 chr1 153394994 . A . PASS END=153394995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 153409534 . T . PASS END=153409698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:35:0,102,1335:0,104,255:40,0 chr1 153410665 . A . PASS END=153410666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 153410667 . A . PASS END=153410668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 153410669 . C . PASS END=153410784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:31:0,80,1148:0,80,255:40,0 chr1 153410785 . C . PASS END=153410792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,89,255:31,0 chr1 153410793 . G . PASS END=153410801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,72,255:25,0 chr1 153410802 . T . PASS END=153410802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:24,0 chr1 153410803 . C . PASS END=153410821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,886:0,61,255:24,0 chr1 153410822 . C A, 114.37 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:64:152,67,0,767,67,767:255,69,0:0,0:1.1437e+02,6.4370e+01,1.5532e-06,4.5000e+02,9.9140e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,13:0,0,14,9 chr1 153412410 . C . PASS END=153412425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,107,1496:0,107,255:38,0 chr1 153430282 . T . PASS END=153430295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,934:0,81,255:36,0 chr1 153430296 . C . PASS END=153430446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:37:0,99,1396:0,99,255:40,2 chr1 153431349 . A . PASS END=153431368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,150,255:40,0 chr1 153431369 . G . PASS END=153431405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,167,255:40,0 chr1 153431406 . C G, 263.24 PASS DP=72;MQ=154.65;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,36,0:0,36,0:213:301,216,0,2755,216,2755:255,216,0:0,0:2.6324e+02,2.1324e+02,0.0000e+00,4.5000e+02,2.4801e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,42,30:0,0,42,30 chr1 153431407 . T . PASS END=153431443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,181,255:40,0 chr1 153431444 . T . PASS END=153431489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:83:41:0,83,1485:0,83,255:40,0 chr1 153507172 . T . PASS END=153507175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 153507176 . C . PASS END=153507176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 153507177 . C . PASS END=153507180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 153507181 . G . PASS END=153507181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 153507182 . A . PASS END=153507182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 153507183 . G . PASS END=153507187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 153507188 . T . PASS END=153507188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 153507189 . C . PASS END=153507207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:28:0,82,1055:0,82,255:36,0 chr1 153507208 . G . PASS END=153507208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:34,0 chr1 153507209 . G . PASS END=153507306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:36:0,98,1365:0,98,255:40,0 chr1 153507678 . C . PASS END=153507690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,808:0,63,255:24,0 chr1 153507691 . A . PASS END=153507691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 153507692 . G . PASS END=153507696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr1 153507697 . T . PASS END=153507740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1023:0,81,255:30,0 chr1 153507741 . G . PASS END=153507757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 153507758 . A . PASS END=153507758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 153507759 . G . PASS END=153507794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,801:0,69,255:24,0 chr1 153507795 . C . PASS END=153507804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:18,0 chr1 153507805 . G . PASS END=153507815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:17:0,33,495:0,51,255:13,0 chr1 153509772 . T . PASS END=153509775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 153509776 . T . PASS END=153509776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 153509777 . T . PASS END=153509912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,980:0,84,255:40,0 chr1 153512530 . C . PASS END=153512681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:40:0,101,1498:0,101,255:40,0 chr1 153513097 . C . PASS END=153513118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:41:0,91,1435:0,91,255:40,0 chr1 153513861 . C . PASS END=153513947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:39:0,90,1313:0,90,255:40,0 chr1 153515716 . T . PASS END=153515737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,148,255:40,0 chr1 153516235 . T . PASS END=153516235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 153516236 . C . PASS END=153516236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 153516237 . A . PASS END=153516254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:24,0 chr1 153516255 . T . PASS END=153516255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 153516256 . A . PASS END=153516260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:24,0 chr1 153516261 . G . PASS END=153516261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 153516262 . G . PASS END=153516266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:25,0 chr1 153516267 . C . PASS END=153516268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,812:0,42,255:24,0 chr1 153516269 . T . PASS END=153516275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,74,255:25,0 chr1 153516276 . A . PASS END=153516276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 153516277 . T . PASS END=153516277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 153516278 . T . PASS END=153516278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,784:0,20,255:22,0 chr1 153516279 . C . PASS END=153516284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 153516285 . A . PASS END=153516285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 153516286 . C . PASS END=153516292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,1009:0,73,255:26,0 chr1 153516293 . G . PASS END=153516297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 153516298 . G . PASS END=153516298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 153516299 . C . PASS END=153516299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr1 153516300 . A . PASS END=153516304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 153516305 . A . PASS END=153516305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 153516306 . G . PASS END=153516309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 153516310 . G . PASS END=153516310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 153516311 . A . PASS END=153516322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1176:0,83,255:33,0 chr1 153516323 . T . PASS END=153516323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:30,0 chr1 153516324 . G . PASS END=153516366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:32,0 chr1 153516367 . C . PASS END=153516368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1047:0,52,255:29,0 chr1 153516369 . G . PASS END=153516369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 153516370 . C . PASS END=153516370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:28,0 chr1 153516371 . T . PASS END=153516374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1048:0,90,255:31,0 chr1 153516375 . G . PASS END=153516375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 153516376 . G . PASS END=153516376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 153516377 . A . PASS END=153516378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1091:0,60,255:28,0 chr1 153516379 . A . PASS END=153516384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 153516385 . T . PASS END=153516399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,933:0,65,255:26,0 chr1 153517130 . C . PASS END=153517266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1210:0,90,255:40,0 chr1 153517267 . C . PASS END=153517267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 153517268 . C . PASS END=153517270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 153520158 . C . PASS END=153520322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:30:0,86,1233:0,86,255:40,0 chr1 153520821 . C . PASS END=153520827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 153520828 . C . PASS END=153520828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr1 153520829 . A . PASS END=153520834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1054:0,84,255:33,0 chr1 153520835 . C . PASS END=153520835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 153520836 . C . PASS END=153520941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1205:0,86,255:39,0 chr1 153520942 . T . PASS END=153520956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr1 153520957 . G . PASS END=153520961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 153533915 . T . PASS END=153533917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 153533918 . G . PASS END=153533920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 153533921 . T . PASS END=153533921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:25,0 chr1 153533922 . C . PASS END=153533932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:30,0 chr1 153533933 . G . PASS END=153533933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 153533934 . C . PASS END=153534063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:33:0,86,1210:0,86,255:40,0 chr1 153534064 . T . PASS END=153534064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:28,0 chr1 153534065 . C . PASS END=153534067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr1 153535891 . C . PASS END=153535894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1129:0,80,255:33,0 chr1 153535895 . G . PASS END=153535895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr1 153535896 . C . PASS END=153536011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1215:0,87,255:40,0 chr1 153536012 . G . PASS END=153536012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 153536210 . C . PASS END=153536211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 153536212 . C . PASS END=153536221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1005:0,84,255:29,0 chr1 153536222 . G . PASS END=153536222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,966:0,73,255:29,0 chr1 153536223 . G . PASS END=153536226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 153536227 . G . PASS END=153536227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 153536228 . C . PASS END=153536228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153536229 . T . PASS END=153536229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 153536230 . C . PASS END=153536233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153536234 . G . PASS END=153536234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:29,0 chr1 153536235 . T . PASS END=153536247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1048:0,90,255:30,0 chr1 153536248 . T . PASS END=153536248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 153536249 . C . PASS END=153536267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:32:0,96,1188:0,96,255:38,0 chr1 153536268 . T . PASS END=153536268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1299:0,78,255:37,0 chr1 153536269 . T . PASS END=153536288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1328:0,100,255:39,0 chr1 153536289 . C . PASS END=153536289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 153536290 . A . PASS END=153536318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,99,255:38,0 chr1 153536319 . A . PASS END=153536319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 153536320 . C . PASS END=153536328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:27,0 chr1 153536329 . C . PASS END=153536339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 153536340 . G . PASS END=153536349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:19,0 chr1 153536350 . T . PASS END=153536353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,57,255:13,0 chr1 153580010 . C . PASS END=153580013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 153580014 . C . PASS END=153580045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:17,0 chr1 153580046 . T . PASS END=153580046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 153580047 . T . PASS END=153580069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,607:0,51,255:19,0 chr1 153580070 . G . PASS END=153580077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 153580078 . A . PASS END=153580079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153580080 . G . PASS END=153580110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:22,0 chr1 153580111 . C . PASS END=153580111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 153580112 . A . PASS END=153580118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 153580119 . G . PASS END=153580157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,551:0,45,255:19,0 chr1 153580158 . T . PASS END=153580158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 153580159 . T . PASS END=153580162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153580163 . T . PASS END=153580168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 153580475 . C . PASS END=153580475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 153580476 . G . PASS END=153580484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 153580485 . T . PASS END=153580485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 153580486 . G . PASS END=153580498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,917:0,64,255:26,0 chr1 153580499 . C . PASS END=153580506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 153580507 . T . PASS END=153580509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:25,0 chr1 153580510 . C . PASS END=153580514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153580515 . A . PASS END=153580517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 153580518 . C . PASS END=153580521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 153580522 . T . PASS END=153580522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 153580523 . C . PASS END=153580523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 153580524 . T . PASS END=153580524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 153580525 . T . PASS END=153580599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1158:0,93,255:37,0 chr1 153580600 . T . PASS END=153580600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:28,0 chr1 153580601 . C . PASS END=153580603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 153580604 . C . PASS END=153580627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,74,255:26,0 chr1 153587361 . T . PASS END=153587361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 153587362 . C . PASS END=153587362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1357:0,105,255:35,0 chr1 153587363 . A . PASS END=153587364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:34,0 chr1 153587365 . T . PASS END=153587365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1357:0,108,255:36,0 chr1 153587366 . G . PASS END=153587370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:69:36:0,69,1258:0,69,255:37,0 chr1 153587371 . C . PASS END=153587468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:38:0,84,1413:0,84,255:40,0 chr1 153587469 . G . PASS END=153587469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1700:0,70,255:40,0 chr1 153587470 . G . PASS END=153587498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:42:0,88,1512:0,88,255:40,0 chr1 153587711 . C . PASS END=153587714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 153587715 . A . PASS END=153587715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 153587716 . T . PASS END=153587717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 153587718 . A . PASS END=153587719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 153587720 . A . PASS END=153587731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 153587732 . C . PASS END=153587732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 153587733 . T . PASS END=153587736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 153587737 . T . PASS END=153587737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 153587738 . G . PASS END=153587743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 153587744 . G . PASS END=153587749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 153587750 . T . PASS END=153587750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 153587751 . A . PASS END=153587802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:28:0,81,1039:0,83,255:32,0 chr1 153587803 . A . PASS END=153587803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 153587804 . G . PASS END=153587808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 153587809 . T . PASS END=153587809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 153587810 . G . PASS END=153587817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 153587818 . T . PASS END=153587818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 153587819 . C . PASS END=153587823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153587824 . T . PASS END=153587854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 153587855 . A . PASS END=153587855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:23,0 chr1 153587856 . T . PASS END=153587857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 153588305 . C . PASS END=153588334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,111,1665:0,112,255:40,0 chr1 153591371 . T . PASS END=153591511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,95,255:40,0 chr1 153591512 . A . PASS END=153591512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 153591513 . T . PASS END=153591514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:27,0 chr1 153598796 . C . PASS END=153598796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 153598797 . T . PASS END=153598797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 153598798 . T . PASS END=153598807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,856:0,62,255:26,0 chr1 153598808 . G . PASS END=153598811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 153598812 . A . PASS END=153598812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 153598813 . A . PASS END=153598821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1019:0,81,255:29,0 chr1 153598822 . T . PASS END=153598822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 153598823 . A . PASS END=153598829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr1 153598830 . T . PASS END=153598830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 153598831 . C . PASS END=153598832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153598833 . T . PASS END=153598833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 153598834 . T . PASS END=153598839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:29,0 chr1 153598840 . C . PASS END=153598840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 153598841 . G . PASS END=153598856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,900:0,89,255:34,0 chr1 153598857 . T . PASS END=153598857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1087:0,50,255:28,0 chr1 153598858 . C . PASS END=153598878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1180:0,83,255:32,0 chr1 153598879 . C . PASS END=153598882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:32:0,68,1164:0,68,255:27,0 chr1 153598883 . G . PASS END=153598892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1208:0,83,255:30,0 chr1 153598893 . G . PASS END=153598893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:30,0 chr1 153598894 . T . PASS END=153598905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1166:0,96,255:32,0 chr1 153598906 . T . PASS END=153598906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr1 153598907 . C . PASS END=153598932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1182:0,93,255:33,0 chr1 153598933 . G . PASS END=153598935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153598936 . G . PASS END=153598941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 153598942 . C . PASS END=153598948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 153600549 . A . PASS END=153600591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,537:0,45,255:18,0 chr1 153600592 . C . PASS END=153600592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 153600593 . T . PASS END=153600608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:17,0 chr1 153600609 . G . PASS END=153600624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr1 153600903 . C . PASS END=153600972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1221:0,87,255:40,0 chr1 153602985 . G . PASS END=153603015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1305:0,90,255:39,0 chr1 153603016 . A . PASS END=153603016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1381:0,71,255:38,0 chr1 153603017 . C . PASS END=153603104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1260:0,94,255:40,0 chr1 153603105 . G . PASS END=153603105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 153603106 . C . PASS END=153603120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,85,255:33,0 chr1 153603121 . C . PASS END=153603122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 153603123 . C . PASS END=153603123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 153603124 . T . PASS END=153603138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,74,255:26,0 chr1 153603988 . G . PASS END=153603991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,137,255:40,0 chr1 153603992 . A . PASS END=153604008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr1 153604174 . G . PASS END=153604317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,4:70:99:50:0,120,1800:0,133,255:40,0 chr1 153609065 . A . PASS END=153609076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1049:0,83,255:34,0 chr1 153609077 . T . PASS END=153609129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1117:0,80,255:34,0 chr1 153610771 . C . PASS END=153610773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,903:0,64,255:26,0 chr1 153610774 . T . PASS END=153610796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,980:0,84,255:34,0 chr1 153610797 . A . PASS END=153610797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr1 153610798 . G . PASS END=153610900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1260:0,85,255:40,0 chr1 153610901 . C . PASS END=153610921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,64,255:26,0 chr1 153610922 . C . PASS END=153610923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:55:24:0,55,807:0,55,255:19,0 chr1 153610924 . G . PASS END=153610924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 153614719 . A . PASS END=153614722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 153614723 . G . PASS END=153614733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 153614734 . C . PASS END=153614734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 153614735 . G . PASS END=153614744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:19,0 chr1 153614745 . G . PASS END=153614747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153614748 . T . PASS END=153614748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,678:0,32,255:19,0 chr1 153614749 . A . PASS END=153614781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,63,255:26,0 chr1 153614782 . G . PASS END=153614795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:31,0 chr1 153614796 . A . PASS END=153614796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 153614797 . G . PASS END=153614925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:33:0,86,1241:0,86,255:40,0 chr1 153615703 . G . PASS END=153615718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1113:0,93,255:32,0 chr1 153615719 . A . PASS END=153615719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:30,0 chr1 153615720 . G . PASS END=153615807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1305:0,84,255:40,0 chr1 153615808 . G . PASS END=153615825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:23:0,60,900:0,69,255:25,0 chr1 153615826 . G . PASS END=153615840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr1 153617540 . G . PASS END=153617543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 153617544 . G . PASS END=153617545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 153617546 . G . LowGQ END=153617546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,5:16:0:16:0,0,344:35,0,255:11,0 chr1 153617547 . T . PASS END=153617547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 153617548 . A . PASS END=153617548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 153617549 . T . PASS END=153617549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 153617550 . G . PASS END=153617551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,418:0,1,255:14,0 chr1 153617552 . T . PASS END=153617552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr1 153617553 . A . PASS END=153617553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,454:0,34,255:16,0 chr1 153617554 . G . PASS END=153617556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:18,0 chr1 153617557 . C . PASS END=153617557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,527:0,21,255:16,0 chr1 153617558 . G . PASS END=153617561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:19,0 chr1 153617562 . A . PASS END=153617562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:17,0 chr1 153617563 . A . PASS END=153617563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,504:0,7,255:16,0 chr1 153617564 . G . PASS END=153617564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr1 153617565 . A . PASS END=153617565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,421:0,7,255:16,0 chr1 153617566 . G . PASS END=153617570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,576:0,40,255:19,0 chr1 153617571 . C . LowGQ END=153617571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,416:26,0,255:14,0 chr1 153617572 . T . PASS END=153617572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,584:0,18,255:18,0 chr1 153617573 . T . LowGQ END=153617574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,466:0,0,255:16,0 chr1 153617575 . G . PASS END=153617576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 153617577 . A . LowGQ END=153617577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,369:26,0,255:13,0 chr1 153617578 . G . PASS END=153617578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:17,0 chr1 153617579 . G . LowGQ END=153617579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,478:13,0,255:16,0 chr1 153617580 . C . PASS END=153617582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,570:0,40,255:18,0 chr1 153617583 . A . PASS END=153617583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:23:19:0,23,492:0,23,255:16,0 chr1 153617584 . G . PASS END=153617584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 153617585 . G . LowGQ END=153617585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,582:20,0,255:18,0 chr1 153617586 . C . PASS END=153617586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153617587 . C . PASS END=153617587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,741:0,36,255:19,0 chr1 153617588 . G . PASS END=153617588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153617589 . A . PASS END=153617591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,730:0,52,255:25,0 chr1 153617592 . C . PASS END=153617594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153617595 . T . PASS END=153617608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:36,0 chr1 153617609 . G . PASS END=153617735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1147:0,80,255:40,0 chr1 153617736 . C . PASS END=153617738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 153617739 . T . PASS END=153617742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 153617743 . T . PASS END=153617743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 153617744 . G . PASS END=153617745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 153631220 . A . PASS END=153631240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr1 153631241 . G . PASS END=153631315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,1047:0,80,255:38,0 chr1 153631316 . C . PASS END=153631316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:29,0 chr1 153631317 . T . PASS END=153631332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:32,0 chr1 153631333 . G . PASS END=153631333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:26,0 chr1 153631334 . C . PASS END=153631342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 153631343 . T . PASS END=153631357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:24,0 chr1 153631358 . G . PASS END=153631359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 153631360 . C . PASS END=153631362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 153631614 . A . PASS END=153631660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,105,1485:0,113,255:40,0 chr1 153631924 . A . PASS END=153632042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,102,1488:0,107,255:40,0 chr1 153633676 . G . PASS END=153633767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1005:0,87,255:36,0 chr1 153633768 . A . PASS END=153633777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:25,0 chr1 153634872 . T . PASS END=153634872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:33,0 chr1 153634873 . C . PASS END=153635015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1147:0,80,255:40,1 chr1 153635016 . T . PASS END=153635016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1005:0,79,255:27,0 chr1 153635017 . A . PASS END=153635018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 153635019 . T . PASS END=153635019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 153635020 . T . PASS END=153635020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153635021 . C . PASS END=153635022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1037:0,71,255:27,0 chr1 153635023 . G . PASS END=153635026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153635027 . C . PASS END=153635032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:25,0 chr1 153635181 . A . PASS END=153635252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,102,1575:0,102,255:40,0 chr1 153635253 . C . PASS END=153635259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:40:0,69,1035:0,120,255:25,0 chr1 153635260 . G . PASS END=153635260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:57:40:0,57,855:0,120,255:19,0 chr1 153635261 . C . PASS END=153635261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:40:0,60,900:0,120,255:20,0 chr1 153635262 . A . PASS END=153635263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:57:37:0,57,855:0,111,255:19,0 chr1 153635264 . A . PASS END=153635266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:20,0 chr1 153635267 . A . PASS END=153635267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 153635268 . T . PASS END=153635271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 153635495 . C . PASS END=153635500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 153635501 . T . PASS END=153635501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 153635502 . T . PASS END=153635516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 153635517 . G . PASS END=153635603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,994:0,81,255:34,0 chr1 153635604 . C . PASS END=153635604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 153635605 . A . PASS END=153635605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153635606 . G . PASS END=153635607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 153635608 . G . PASS END=153635609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 153635691 . C . PASS END=153635729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1174:0,83,255:33,0 chr1 153635730 . T . PASS END=153635731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1124:0,77,255:26,0 chr1 153635732 . G . PASS END=153635733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 153635734 . T . PASS END=153635734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1007:0,73,255:26,0 chr1 153635735 . C . PASS END=153635736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 153635737 . T . PASS END=153635752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:26,0 chr1 153636519 . T . PASS END=153636606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,110,1504:0,110,255:40,0 chr1 153636872 . G . PASS END=153636897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,187,255:40,0 chr1 153636898 . C . PASS END=153636950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,120,1800:0,150,255:40,0 chr1 153637696 . A . PASS END=153637696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 153637697 . A . PASS END=153637697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1377:0,52,255:38,0 chr1 153637698 . T . PASS END=153637802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:41:0,87,1305:0,105,255:40,0 chr1 153637803 . A . PASS END=153637806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:34:0,75,1125:0,102,255:26,0 chr1 153637807 . T . PASS END=153637812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:27,0 chr1 153638139 . C . PASS END=153638204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,132,255:40,0 chr1 153639972 . C . PASS END=153640113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:96:45:0,96,1440:0,135,255:40,0 chr1 153640114 . T . PASS END=153640114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1164:0,64,255:29,0 chr1 153640115 . G . PASS END=153640121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1341:0,95,255:33,0 chr1 153640122 . T . PASS END=153640122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1221:0,77,255:31,0 chr1 153640123 . T . PASS END=153640133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,963:0,85,255:31,0 chr1 153640476 . C . PASS END=153640553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,168,255:40,0 chr1 153640929 . C . PASS END=153641033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:33:0,86,1239:0,86,255:40,0 chr1 153642312 . C . PASS END=153642334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,155,255:40,0 chr1 153642335 . G . PASS END=153642354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,179,255:40,0 chr1 153642647 . C . PASS END=153642706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,134,255:40,0 chr1 153643394 . C . PASS END=153643398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,138,255:40,0 chr1 153651585 . A . PASS END=153651585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 153651586 . T . PASS END=153651589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr1 153651590 . G . LowGQ END=153651592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:0,0,155:5,0 chr1 153651593 . G . PASS END=153651597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,180:5,0 chr1 153651598 . G . LowGQ END=153651598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,147:13,0,160:4,0 chr1 153651599 . G . PASS END=153651610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr1 153651611 . C . PASS END=153651611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 153651612 . T . PASS END=153651612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 153651613 . C . PASS END=153651613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 153651614 . C . PASS END=153651637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,202:6,0 chr1 153651638 . G . PASS END=153651648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 153651649 . C . PASS END=153651678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr1 153651679 . C . PASS END=153651679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 153651680 . G . PASS END=153651687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 153651688 . T . LowGQ END=153651688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:6,0 chr1 153651689 . G . PASS END=153651706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 153651707 . G . PASS END=153651708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 153651709 . C . LowGQ END=153651712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 153651713 . G . PASS END=153651727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:13,0 chr1 153651728 . C . PASS END=153651751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 153651752 . A . PASS END=153651752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 153651753 . C . PASS END=153651765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr1 153651766 . T . PASS END=153651766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 153651767 . G . PASS END=153651784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,629:0,40,255:19,0 chr1 153651785 . G . PASS END=153651786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153651787 . C . PASS END=153651787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:19,0 chr1 153651788 . G . PASS END=153651821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:24,0 chr1 153651822 . A . PASS END=153651824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,855:0,59,255:19,0 chr1 153651825 . G . PASS END=153651832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1017:0,73,255:25,0 chr1 153651833 . C . PASS END=153651833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:24,0 chr1 153651834 . A . PASS END=153651836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 153651837 . A . PASS END=153651837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 153651838 . G . PASS END=153651840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 153651841 . A . PASS END=153651841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 153651842 . A . PASS END=153651855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 153651856 . T . PASS END=153651856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 153651857 . C . PASS END=153651866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 153651867 . A . PASS END=153651867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:19,0 chr1 153651868 . C . PASS END=153651889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 153651890 . G . PASS END=153651892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153651893 . C . PASS END=153651896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 153651897 . A . PASS END=153651897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 153651898 . A . PASS END=153651904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr1 153651905 . G . PASS END=153651905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 153651906 . C . PASS END=153651912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 153651913 . C . PASS END=153651913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr1 153651914 . C . PASS END=153651921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 153651922 . T . PASS END=153651922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 153651923 . C . PASS END=153651931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,768:0,63,255:23,0 chr1 153651932 . C . PASS END=153651932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 153651933 . G . PASS END=153651933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153651934 . G . PASS END=153651935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 153651936 . T . PASS END=153651936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153651937 . G . PASS END=153651937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 153651938 . C . PASS END=153651944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 153651945 . G . PASS END=153651945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 153651946 . C . PASS END=153651949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 153651950 . C . PASS END=153651953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 153651954 . C . PASS END=153651954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:16,0 chr1 153651955 . C . PASS END=153651960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 153651961 . G . PASS END=153651961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 153651962 . G . PASS END=153651966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:14,0 chr1 153651967 . T . PASS END=153651974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr1 153651975 . C . PASS END=153652010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:17,0 chr1 153652011 . G . PASS END=153652017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 153652018 . G . PASS END=153652018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 153652019 . C . PASS END=153652032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:22,0 chr1 153652033 . A . PASS END=153652034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 153652035 . G . PASS END=153652044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 153652045 . T . PASS END=153652086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 153652087 . T . PASS END=153652091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153652092 . G . PASS END=153652094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153652095 . G . PASS END=153652098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 153652099 . T . PASS END=153652109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 153652110 . C . PASS END=153652110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 153652111 . T . PASS END=153652124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 153652125 . C . PASS END=153652126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,770:0,60,255:21,0 chr1 153652127 . A . PASS END=153652127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 153652128 . G . PASS END=153652130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153652131 . C . PASS END=153652137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:24,0 chr1 153652138 . T . PASS END=153652138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:22,0 chr1 153652139 . C . PASS END=153652146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 153652147 . A . PASS END=153652147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:21,0 chr1 153652148 . C . PASS END=153652156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 153652157 . T . PASS END=153652157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 153652158 . G . PASS END=153652161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 153652162 . A . PASS END=153652163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 153652164 . G . PASS END=153652164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153652165 . A . PASS END=153652165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 153652166 . G . PASS END=153652176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 153652177 . T . PASS END=153652187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,56,255:19,0 chr1 153652188 . G . PASS END=153652188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:19,0 chr1 153652189 . G . PASS END=153652193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 153652194 . T . PASS END=153652194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:17,0 chr1 153652195 . T . PASS END=153652210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr1 153652211 . C . PASS END=153652213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 153652214 . C . PASS END=153652251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:19,0 chr1 153652252 . A . PASS END=153652252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 153652253 . C . PASS END=153652269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 153652270 . C . PASS END=153652273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,540:0,35,255:13,0 chr1 153652274 . G . PASS END=153652283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:14:0,21,315:0,42,255:8,0 chr1 153652284 . A . PASS END=153652285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:18:13:0,18,270:0,39,255:6,0 chr1 153652286 . C . PASS END=153652291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 153652292 . G . PASS END=153652293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 153652294 . G . PASS END=153652295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 153652296 . A . PASS END=153652299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 153652300 . G . PASS END=153652300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 153652301 . C . PASS END=153652305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,241:6,0 chr1 153652977 . T . PASS END=153652979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:26,0 chr1 153652980 . T . PASS END=153653138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1002:0,81,255:40,0 chr1 153653139 . G . PASS END=153653176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,798:0,63,255:26,0 chr1 153653656 . G . PASS END=153653738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,112,1485:0,112,255:40,0 chr1 153653739 . G . PASS END=153653739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:27:47:0,27,1303:0,27,255:36,0 chr1 153653740 . C . PASS END=153653766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:39:0,101,1385:0,101,255:39,0 chr1 153653767 . C . PASS END=153653767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1194:0,64,255:28,0 chr1 153653768 . T . PASS END=153653769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:29,0 chr1 153654180 . G . PASS END=153654315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:38:0,93,1343:0,93,255:40,2 chr1 153654974 . G . PASS END=153655065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,123,255:40,0 chr1 153655852 . G . PASS END=153655856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:31,0 chr1 153655857 . A . PASS END=153655857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 153655858 . C . PASS END=153655983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1180:0,81,255:40,0 chr1 153655984 . C . PASS END=153655987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,95,255:26,0 chr1 153656216 . A . PASS END=153656222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:29,0 chr1 153656223 . T . PASS END=153656224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 153656225 . C . PASS END=153656250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:29:0,80,1086:0,80,255:34,0 chr1 153656251 . G . PASS END=153656251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr1 153656252 . G . PASS END=153656290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1075:0,85,255:35,0 chr1 153656291 . T . PASS END=153656300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:68:29:0,68,1000:0,68,255:25,0 chr1 153657440 . G . PASS END=153657446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 153657447 . C . PASS END=153657447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 153657448 . A . PASS END=153657518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1147:0,80,255:34,0 chr1 153657519 . A . PASS END=153657553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 153657554 . G . PASS END=153657560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:23:0,45,675:0,69,255:19,0 chr1 153658282 . A . PASS END=153658346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:33:0,92,1195:0,92,255:38,0 chr1 153658347 . A . PASS END=153658356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:34:0,75,1125:0,94,255:26,0 chr1 153658599 . G . PASS END=153658676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,106,1598:0,106,255:40,0 chr1 153659122 . A . PASS END=153659122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153659123 . T . PASS END=153659123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 153659124 . G . PASS END=153659187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:31:0,90,1189:0,92,255:40,0 chr1 153659188 . T . PASS END=153659188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr1 153659189 . G . PASS END=153659220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,98,255:37,0 chr1 153659221 . C . PASS END=153659221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:30,0 chr1 153659222 . T . PASS END=153659226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 153659492 . G . PASS END=153659563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:46:0,105,1604:0,105,255:40,0 chr1 153659676 . G . PASS END=153659678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 153659679 . A . PASS END=153659697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 153659698 . G . PASS END=153659698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 153659699 . G . PASS END=153659706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1255:0,86,255:31,0 chr1 153659707 . G . PASS END=153659707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 153659708 . T . PASS END=153659759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:31:0,86,1133:0,86,255:35,0 chr1 153659760 . C . PASS END=153659760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr1 153659761 . T . PASS END=153659805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1178:0,83,255:34,0 chr1 153659806 . C . PASS END=153659832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 153660066 . C . PASS END=153660088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,166,255:40,0 chr1 153660110 . A . PASS END=153660265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:33:0,87,1249:0,88,255:40,0 chr1 153660529 . A . PASS END=153660530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 153660531 . A . PASS END=153660531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:21,0 chr1 153660532 . T . PASS END=153660533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 153660534 . A . PASS END=153660534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 153660535 . T . PASS END=153660535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 153660536 . C . PASS END=153660536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 153660537 . G . PASS END=153660539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 153660540 . C . PASS END=153660540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 153660541 . G . PASS END=153660548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,825:0,61,255:25,0 chr1 153660549 . C . PASS END=153660549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 153660550 . G . PASS END=153660560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,858:0,78,255:26,0 chr1 153660561 . C . PASS END=153660569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,880:0,64,255:26,0 chr1 153660570 . C . PASS END=153660570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:23,0 chr1 153660571 . G . PASS END=153660575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:23,0 chr1 153660576 . T . PASS END=153660576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:22,0 chr1 153660577 . C . PASS END=153660579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 153660580 . T . PASS END=153660580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:19,0 chr1 153660581 . G . PASS END=153660594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,62,255:23,0 chr1 153660595 . A . PASS END=153660595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 153660596 . C . PASS END=153660620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,847:0,62,255:26,0 chr1 153660621 . C . PASS END=153660621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 153660622 . A . PASS END=153660648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 153660649 . A . PASS END=153660652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 153660653 . G . PASS END=153660653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:26,0 chr1 153660654 . C . PASS END=153660655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 153660656 . A . PASS END=153660695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,792:0,64,255:26,0 chr1 153660696 . A . PASS END=153660697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153661429 . G . PASS END=153661439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,750:0,66,255:25,0 chr1 153661440 . G . PASS END=153661448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 153661449 . T . PASS END=153661449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:26,0 chr1 153661450 . G . PASS END=153661468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 153661469 . A . PASS END=153661469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:28,0 chr1 153661470 . T . PASS END=153661484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1117:0,80,255:34,0 chr1 153661485 . A . PASS END=153661485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,919:0,49,255:28,0 chr1 153661486 . C . PASS END=153661534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1180:0,83,255:34,0 chr1 153661535 . A . PASS END=153661572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,60,255:26,0 chr1 153661573 . T . PASS END=153661575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 153661664 . C . PASS END=153661694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:34:0,84,1286:0,84,255:39,0 chr1 153661695 . A . PASS END=153661695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1252:0,72,255:36,0 chr1 153661696 . C . PASS END=153661785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:39:0,81,1285:0,81,255:40,0 chr1 153661786 . A . PASS END=153661786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:31,0 chr1 153661787 . G . PASS END=153661787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 153661929 . G . PASS END=153661977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:43:0,90,1492:0,90,255:40,0 chr1 153661978 . A . PASS END=153661978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:35,0 chr1 153661979 . C . PASS END=153661995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:35:0,87,1305:0,88,255:35,0 chr1 153661996 . A . PASS END=153661996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:28,0 chr1 153661997 . G . PASS END=153661997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 153662282 . G . PASS END=153662311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 153662312 . G . PASS END=153662312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 153662313 . T . PASS END=153662316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 153662317 . A . PASS END=153662323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153662324 . C . PASS END=153662325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153662326 . T . PASS END=153662326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 153662327 . G . PASS END=153662334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 153662335 . C . PASS END=153662335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 153662336 . G . PASS END=153662341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 153662342 . C . PASS END=153662390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,839:0,63,255:25,0 chr1 153662391 . T . PASS END=153662391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 153662392 . G . PASS END=153662413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 153662414 . C . PASS END=153662452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,613:0,51,255:18,0 chr1 153662453 . A . PASS END=153662454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:17:0,37,585:0,37,255:13,0 chr1 153662455 . A . PASS END=153662456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153662760 . G . PASS END=153662858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:42:0,96,1440:0,96,255:40,0 chr1 153665582 . C . PASS END=153665591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,895:0,67,255:26,0 chr1 153665592 . C . PASS END=153665594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 153665595 . C . PASS END=153665595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 153665596 . T . PASS END=153665607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,966:0,84,255:28,0 chr1 153665608 . A . PASS END=153665608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:27,0 chr1 153665609 . C . PASS END=153665615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153665616 . T . PASS END=153665616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153665617 . G . PASS END=153665618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 153665619 . C . PASS END=153665619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 153665620 . C . PASS END=153665628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 153665629 . T . PASS END=153665629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:28,0 chr1 153665630 . T . PASS END=153665633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 153665634 . T . PASS END=153665634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 153665635 . G . PASS END=153665636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153665637 . T . PASS END=153665644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1037:0,74,255:26,0 chr1 153665645 . T . PASS END=153665645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:23,0 chr1 153665646 . G . PASS END=153665654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:24,0 chr1 153665655 . A . PASS END=153665655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,766:0,44,255:21,0 chr1 153665656 . G . PASS END=153665659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 153665660 . A . PASS END=153665660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 153665661 . T . PASS END=153665669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,895:0,62,255:26,0 chr1 153665670 . G . PASS END=153665670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 153665671 . A . PASS END=153665673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 153665828 . G . PASS END=153665832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,93,255:31,0 chr1 153665833 . A . PASS END=153665833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:30,0 chr1 153665834 . G . PASS END=153665859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1127:0,93,255:32,0 chr1 153665860 . T . PASS END=153665876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:26,0 chr1 153665877 . G . PASS END=153665883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:22,0 chr1 153665884 . A . PASS END=153665890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:18,0 chr1 153701111 . A . PASS END=153701111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:9,0 chr1 153701112 . T . PASS END=153701112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 153701113 . G . PASS END=153701113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 153701114 . G . LowGQ END=153701114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:8,0 chr1 153701115 . A . PASS END=153701123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 153701124 . A . PASS END=153701132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 153701133 . G . PASS END=153701133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 153701134 . G . PASS END=153701154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,397:0,33,255:12,0 chr1 153701155 . T . PASS END=153701155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 153701156 . T . PASS END=153701164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 153701165 . G . PASS END=153701171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 153701172 . G . PASS END=153701172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 153701173 . T . PASS END=153701178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 153701179 . A . PASS END=153701179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 153701180 . G . PASS END=153701184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,515:0,48,255:16,0 chr1 153701185 . A . LowGQ END=153701185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,457:7,0,255:14,0 chr1 153701186 . G . PASS END=153701187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 153701188 . G . PASS END=153701188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr1 153701189 . G . PASS END=153701197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 153701198 . G . PASS END=153701199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,565:0,32,255:13,0 chr1 153701200 . C . PASS END=153701201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 153701202 . C . PASS END=153701204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153701205 . G . PASS END=153701218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 153701219 . C . PASS END=153701219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 153701220 . T . PASS END=153701221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 153701222 . C . PASS END=153701229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 153701230 . C . PASS END=153701231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 153701232 . G . PASS END=153701237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 153701238 . A . PASS END=153701238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 153701239 . T . PASS END=153701246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,376:0,36,255:12,0 chr1 153701247 . A . LowGQ END=153701247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,364:3,0,255:11,0 chr1 153701248 . T . PASS END=153701248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:8,0 chr1 153701249 . G . PASS END=153701249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:8,0 chr1 153701250 . A . PASS END=153701255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 153701256 . A . PASS END=153701256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:8,0 chr1 153701257 . G . PASS END=153701260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 153713127 . A . PASS END=153713210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:35:0,81,1257:0,81,255:40,0 chr1 153713761 . G . PASS END=153713761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr1 153713762 . T . PASS END=153713762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:56:35:0,56,1175:0,56,255:32,0 chr1 153713763 . G . PASS END=153713844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:92:35:0,92,1238:0,92,255:40,0 chr1 153719433 . T . PASS END=153719525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,99,255:40,0 chr1 153719526 . C . PASS END=153719546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:26,0 chr1 153719755 . T . PASS END=153719839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:64:0,120,1800:0,136,255:40,0 chr1 153721165 . G . PASS END=153721231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:53:0,120,1800:0,130,255:40,0 chr1 153723571 . G . PASS END=153723715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,108,1620:0,116,255:40,0 chr1 153724755 . T . PASS END=153724884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1128:0,83,255:40,0 chr1 153727118 . G . PASS END=153727192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:37:0,94,1197:0,94,255:40,0 chr1 153727193 . A . PASS END=153727193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:34:38:0,34,1161:0,34,255:30,0 chr1 153727194 . A . PASS END=153727194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1125:0,50,255:31,0 chr1 153727195 . C . LowGQ END=153727195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,6:38:0:38:0,0,978:44,0,255:30,0 chr1 153727196 . T . PASS END=153727196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 153727197 . C . PASS END=153727197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1111:0,61,255:31,0 chr1 153727198 . C . PASS END=153727199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1236:0,94,255:33,0 chr1 153727200 . C . PASS END=153727200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:33,0 chr1 153727201 . T . PASS END=153727204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:35,0 chr1 153727205 . T . PASS END=153727205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr1 153727206 . G . PASS END=153727215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1142:0,88,255:34,0 chr1 153730048 . G . PASS END=153730072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1283:0,98,255:40,0 chr1 153730073 . A . PASS END=153730073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1424:0,77,255:39,0 chr1 153730074 . C . PASS END=153730229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:34:0,86,1247:0,86,255:40,0 chr1 153730230 . A . PASS END=153730230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:31,0 chr1 153730231 . A . PASS END=153730239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,1080:0,63,255:27,0 chr1 153732002 . T . PASS END=153732049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,105,1598:0,105,255:40,0 chr1 153732050 . C . PASS END=153732050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1588:0,77,255:40,0 chr1 153732051 . T . PASS END=153732080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:32:0,90,1350:0,96,255:40,0 chr1 153732081 . T . PASS END=153732081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 153732082 . G . PASS END=153732083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 153732084 . A . PASS END=153732089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,76,255:26,0 chr1 153732787 . A . PASS END=153732866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:89:46:0,89,1637:0,89,255:40,0 chr1 153733303 . A . PASS END=153733394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:42:0,104,1489:0,104,255:40,1 chr1 153733496 . G . PASS END=153733553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:61:0,120,1800:0,156,255:40,0 chr1 153734046 . A . PASS END=153734152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:42:0,93,1395:0,110,255:40,0 chr1 153735204 . T . PASS END=153735207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:31,0 chr1 153735208 . A . PASS END=153735208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 153735209 . A . PASS END=153735323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:32:0,84,1260:0,94,255:40,0 chr1 153735709 . G . PASS END=153735716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,102,1327:0,105,255:38,0 chr1 153735717 . A . PASS END=153735717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1284:0,75,255:37,0 chr1 153735718 . G . PASS END=153735838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:83:32:0,83,1193:0,83,255:40,0 chr1 153736308 . T . PASS END=153736362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,114,1346:0,114,255:40,0 chr1 153736594 . G . PASS END=153736606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1441:0,104,255:39,0 chr1 153736607 . C . PASS END=153736607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 153736608 . G . PASS END=153736610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 153736611 . G . PASS END=153736611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 153736612 . C . PASS END=153736697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1350:0,108,255:40,0 chr1 153737166 . G . PASS END=153737210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,155,255:40,0 chr1 153737420 . G . PASS END=153737539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1215:0,95,255:40,0 chr1 153740150 . C . PASS END=153740171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,684:0,44,255:19,0 chr1 153740172 . A . PASS END=153740213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 153740214 . C . PASS END=153740215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 153740216 . G . PASS END=153740216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 153740217 . C . PASS END=153740218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153740219 . C . PASS END=153740219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 153740220 . A . PASS END=153740234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 153740235 . G . PASS END=153740235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153740236 . A . PASS END=153740238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153740239 . T . PASS END=153740239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 153740240 . G . PASS END=153740241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153740242 . A . PASS END=153740242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 153740243 . G . PASS END=153740245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153740246 . C . PASS END=153740248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153740249 . C . PASS END=153740273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr1 153740274 . T . PASS END=153740292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:25,0 chr1 153740293 . T . PASS END=153740293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:19,0 chr1 153740294 . C . PASS END=153740300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 153740301 . G . PASS END=153740301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 153740302 . A . PASS END=153740303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 153741369 . T . PASS END=153741380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:44:0,80,1513:0,80,255:40,0 chr1 153741381 . A . PASS END=153741382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1482:0,61,255:40,0 chr1 153741383 . C . PASS END=153741396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:83:46:0,83,1554:0,83,255:40,0 chr1 153741397 . A . PASS END=153741397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1552:0,75,255:40,0 chr1 153741398 . G . PASS END=153741437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:38:0,90,1350:0,92,255:40,0 chr1 153742245 . C . PASS END=153742320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:45:0,88,1567:0,88,255:40,0 chr1 153742674 . T . PASS END=153742685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:25,0 chr1 153742686 . A . PASS END=153742686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 153742687 . C . PASS END=153742688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 153742689 . G . PASS END=153742689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 153742690 . G . PASS END=153742787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:30:0,84,1056:0,84,255:40,0 chr1 153743161 . A . PASS END=153743196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1225:0,89,255:40,0 chr1 153743197 . T . PASS END=153743204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1335:0,105,255:35,0 chr1 153743205 . G . PASS END=153743205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:31,0 chr1 153743206 . A . PASS END=153743209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 153744272 . G . PASS END=153744284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1216:0,83,255:36,0 chr1 153744285 . A . PASS END=153744285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1200:0,39,255:33,0 chr1 153744286 . T . PASS END=153744435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:37:0,87,1305:0,94,255:40,0 chr1 153744436 . A . PASS END=153744436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1235:0,56,255:27,0 chr1 153744437 . G . PASS END=153744439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,108,255:26,0 chr1 153744816 . C . PASS END=153744826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 153744827 . C . PASS END=153744832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 153744833 . G . PASS END=153744850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:26,0 chr1 153744851 . C . PASS END=153744860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 153744861 . G . PASS END=153744862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1025:0,71,255:27,0 chr1 153744863 . T . PASS END=153744864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153744865 . C . PASS END=153744872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1015:0,71,255:26,0 chr1 153744873 . C . PASS END=153744875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153744876 . G . PASS END=153744878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 153744879 . C . PASS END=153744884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 153744885 . G . PASS END=153744885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,984:0,32,255:26,0 chr1 153744886 . C . PASS END=153744886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 153744887 . G . PASS END=153744888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 153744889 . C . PASS END=153744889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 153744890 . T . PASS END=153744899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1055:0,80,255:32,0 chr1 153744900 . C . PASS END=153744900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 153744901 . A . PASS END=153744905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:33,0 chr1 153744906 . C . PASS END=153744906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1209:0,64,255:33,0 chr1 153744907 . A . PASS END=153744908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 153744909 . G . PASS END=153744909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 153744910 . C . PASS END=153744915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:34,0 chr1 153744916 . T . PASS END=153744916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:31,0 chr1 153744917 . G . PASS END=153744931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:32,0 chr1 153744932 . T . PASS END=153744932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 153744933 . C . PASS END=153744935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 153744936 . C . PASS END=153744937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1119:0,77,255:27,0 chr1 153744938 . T . PASS END=153744939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 153744940 . C . PASS END=153744941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 153744942 . G . PASS END=153744947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 153744948 . A . PASS END=153744960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:28:0,74,1086:0,74,255:26,0 chr1 153744961 . G . PASS END=153744962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 153744963 . C . PASS END=153744966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 153744967 . G . PASS END=153745146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1045:0,80,255:40,0 chr1 153745147 . C . PASS END=153745147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:30,0 chr1 153745148 . A . PASS END=153745150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,107,255:33,0 chr1 153745151 . A . PASS END=153745151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:28,0 chr1 153745152 . T . PASS END=153745164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1350:0,87,255:32,0 chr1 153745165 . T . PASS END=153745165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1005:0,79,255:29,0 chr1 153745166 . G . PASS END=153745171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 153745172 . A . PASS END=153745180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr1 153745181 . A . PASS END=153745181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:23,0 chr1 153745182 . G . PASS END=153745187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:25,0 chr1 153745401 . A . PASS END=153745409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:19,0 chr1 153745410 . T . PASS END=153745410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153745411 . C . PASS END=153745411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 153745412 . T . PASS END=153745421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 153745422 . G . PASS END=153745429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 153745430 . A . PASS END=153745430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 153745431 . A . PASS END=153745432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 153745433 . A . PASS END=153745433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:30,0 chr1 153745434 . T . PASS END=153745435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1154:0,93,255:31,0 chr1 153745436 . A . PASS END=153745436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 153745437 . G . PASS END=153745439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:32,0 chr1 153745440 . C . PASS END=153745440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 153745441 . T . PASS END=153745551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:35:0,87,1311:0,87,255:40,0 chr1 153745552 . G . PASS END=153745552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:32,0 chr1 153745553 . C . PASS END=153745557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:32,0 chr1 153745669 . G . PASS END=153745699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,995:0,84,255:29,0 chr1 153745700 . A . PASS END=153745700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 153745701 . G . PASS END=153745709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 153745710 . A . PASS END=153745731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,71,255:26,0 chr1 153745732 . T . PASS END=153745746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,681:0,41,255:19,0 chr1 153747590 . A . PASS END=153747618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,535:0,40,255:19,0 chr1 153747619 . C . PASS END=153747619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 153747620 . T . PASS END=153747623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,657:0,41,255:19,0 chr1 153747624 . A . PASS END=153747626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 153747627 . A . PASS END=153747628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 153747629 . A . PASS END=153747629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:17,0 chr1 153747630 . G . PASS END=153747634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153747635 . A . PASS END=153747635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 153747636 . A . PASS END=153747637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 153747638 . C . PASS END=153747638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,631:0,24,255:19,0 chr1 153747639 . C . PASS END=153747649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr1 153747650 . G . PASS END=153747650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 153747651 . G . PASS END=153747652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 153747653 . A . PASS END=153747653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 153747654 . G . PASS END=153747660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 153747661 . G . PASS END=153747681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,659:0,41,255:21,0 chr1 153747682 . G . PASS END=153747682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 153747683 . G . PASS END=153747683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 153747684 . T . PASS END=153747684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr1 153747685 . G . PASS END=153747685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr1 153747686 . C . PASS END=153747686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 153747687 . G . PASS END=153747696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 153747697 . C . PASS END=153747698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 153747699 . G . PASS END=153747711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:15,0 chr1 153747712 . C . PASS END=153747713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 153747714 . C . PASS END=153747716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 153747717 . C . PASS END=153747717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 153747718 . T . PASS END=153747729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 153747730 . T . PASS END=153747733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 153747734 . C . PASS END=153747734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:12,0 chr1 153747735 . T . PASS END=153747735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153747736 . G . PASS END=153747739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 153747740 . G . PASS END=153747745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 153747746 . G . PASS END=153747777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 153747778 . C . PASS END=153747781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153747782 . T . PASS END=153747805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:16:0,40,582:0,40,255:18,0 chr1 153747806 . T . PASS END=153747806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,558:0,24,255:13,0 chr1 153747807 . G . PASS END=153747810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 153747811 . A . PASS END=153747811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 153747812 . G . PASS END=153747825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:19,0 chr1 153747826 . G . PASS END=153747826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:18,0 chr1 153747827 . G . PASS END=153747827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 153747828 . T . PASS END=153747828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 153747829 . G . PASS END=153747831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:22,0 chr1 153747832 . A . PASS END=153747833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 153747834 . T . PASS END=153747834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:21,0 chr1 153747835 . G . PASS END=153747835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 153747836 . G . PASS END=153747841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 153747842 . T . PASS END=153747842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 153747843 . G . PASS END=153747845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 153747846 . A . PASS END=153747846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 153747847 . G . PASS END=153747857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:23,0 chr1 153747858 . C . PASS END=153747859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 153747860 . C . PASS END=153747872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,834:0,72,255:25,0 chr1 153747873 . A . PASS END=153747873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 153747874 . G . PASS END=153747899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,812:0,62,255:26,0 chr1 153747900 . G . PASS END=153747900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 153747901 . T . PASS END=153747903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 153747904 . T . PASS END=153747907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153747908 . A . PASS END=153747937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:24:0,63,931:0,64,255:25,0 chr1 153747938 . T . PASS END=153747945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 153747946 . G . PASS END=153747947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153747948 . C . PASS END=153747949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr1 153747950 . G . PASS END=153747952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153747953 . C . PASS END=153747953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 153747954 . C . PASS END=153747961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153747962 . G . PASS END=153747971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 153747972 . C . PASS END=153747975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153747976 . G . PASS END=153747976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 153747977 . G . PASS END=153747978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153747979 . T . PASS END=153747979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 153747980 . G . PASS END=153747980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153747981 . C . PASS END=153748011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 153748012 . A . PASS END=153748012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 153748013 . C . PASS END=153748016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 153748017 . T . PASS END=153748018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 153748019 . C . PASS END=153748019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 153748020 . T . PASS END=153748027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153748028 . A . PASS END=153748034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 153748035 . A . PASS END=153748035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 153748036 . C . PASS END=153748042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 153748043 . C . PASS END=153748053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,527:0,31,255:13,0 chr1 153748054 . C . PASS END=153748060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 153748061 . C . PASS END=153748061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 153748062 . C . PASS END=153748063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153748064 . G . PASS END=153748066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153748067 . G . PASS END=153748067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 153748068 . A . PASS END=153748068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153748069 . C . PASS END=153748069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153748070 . T . PASS END=153748079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 153748080 . C . PASS END=153748080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 153748081 . G . PASS END=153748089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 153748090 . T . PASS END=153748090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 153748091 . C . PASS END=153748096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 153748097 . T . PASS END=153748097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 153748098 . G . PASS END=153748118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 153748119 . G . PASS END=153748119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr1 153748120 . C . PASS END=153748173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,405:0,33,255:13,0 chr1 153748174 . G . PASS END=153748174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 153748175 . G . PASS END=153748210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 153748211 . G . PASS END=153748221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 153748222 . T . PASS END=153748222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 153748223 . C . PASS END=153748223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 153748224 . T . PASS END=153748224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 153748225 . C . PASS END=153748249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr1 153748250 . T . PASS END=153748250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153748251 . A . PASS END=153748253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 153748254 . C . PASS END=153748254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 153748255 . A . PASS END=153748270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:17,0 chr1 153748271 . A . PASS END=153748271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 153748272 . G . PASS END=153748277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,659:0,51,255:19,0 chr1 153748278 . G . PASS END=153748302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 153748303 . G . PASS END=153748303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 153748304 . C . PASS END=153748322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 153748323 . C . PASS END=153748338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 153748339 . C . PASS END=153748341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153748342 . C . PASS END=153748342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 153748343 . G . PASS END=153748345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 153748346 . G . PASS END=153748346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 153748347 . G . PASS END=153748347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:16,0 chr1 153748348 . G . PASS END=153748377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,629:0,47,255:18,0 chr1 153748378 . G . PASS END=153748378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 153748379 . G . PASS END=153748385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 153748386 . G . PASS END=153748386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 153748387 . A . PASS END=153748394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 153748395 . C . PASS END=153748408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 153748409 . G . PASS END=153748411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 153748412 . G . PASS END=153748476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:24,0 chr1 153748477 . A . PASS END=153748478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 153748479 . C . PASS END=153748481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153748482 . T . PASS END=153748501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,721:0,57,255:19,0 chr1 153748502 . G . PASS END=153748505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 153748506 . C . PASS END=153748533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr1 153748534 . G . PASS END=153748596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,819:0,62,255:25,0 chr1 153748597 . C . PASS END=153748640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:19,0 chr1 153748994 . A . PASS END=153748995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,450:0,39,255:13,0 chr1 153748996 . T . PASS END=153749008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:17,0 chr1 153749009 . T . PASS END=153749009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 153749010 . G . PASS END=153749011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 153749012 . A . PASS END=153749018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 153749019 . C . PASS END=153749019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 153749020 . C . PASS END=153749022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 153749023 . C . PASS END=153749023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 153749024 . C . PASS END=153749025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153749026 . G . PASS END=153749026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 153749027 . C . PASS END=153749041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,765:0,69,255:26,0 chr1 153749042 . G . PASS END=153749058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1350:0,93,255:34,0 chr1 153749059 . G . PASS END=153749059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:32,0 chr1 153749060 . C . PASS END=153749172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:36:0,96,1346:0,98,255:40,0 chr1 153749173 . T . PASS END=153749173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1349:0,70,255:32,0 chr1 153749174 . G . PASS END=153749180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:33,0 chr1 153749181 . C . PASS END=153749203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,878:0,60,255:26,0 chr1 153749538 . G . PASS END=153749538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 153749539 . C . PASS END=153749539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 153749540 . C . PASS END=153749541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 153749542 . C . PASS END=153749552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 153749553 . C . PASS END=153749554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 153749555 . C . PASS END=153749556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 153749557 . G . PASS END=153749557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 153749558 . A . PASS END=153749559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 153749560 . C . PASS END=153749560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 153749561 . A . PASS END=153749589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1158:0,84,255:34,0 chr1 153749590 . C . PASS END=153749590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:33,0 chr1 153749591 . T . PASS END=153749677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:34:0,87,1305:0,87,255:40,0 chr1 153749678 . G . PASS END=153749685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:30:0,77,1147:0,77,255:27,0 chr1 153749686 . C . PASS END=153749686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:27,0 chr1 153749687 . A . PASS END=153749688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 153749689 . G . PASS END=153749691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 153749692 . C . PASS END=153749696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153750237 . G . PASS END=153750260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,758:0,69,255:25,0 chr1 153750261 . A . PASS END=153750261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 153750262 . G . PASS END=153750262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 153750263 . T . PASS END=153750263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 153750264 . T . PASS END=153750264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,662:0,25,255:21,0 chr1 153750265 . C . PASS END=153750323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,892:0,61,255:26,0 chr1 153750324 . T . PASS END=153750325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 153750326 . G . PASS END=153750327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 153750328 . G . PASS END=153750361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,460:0,42,255:19,0 chr1 153750637 . A . PASS END=153750639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 153750640 . A . PASS END=153750640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153750641 . A . PASS END=153750641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153750642 . G . PASS END=153750642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 153750643 . G . PASS END=153750663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 153750664 . C . PASS END=153750665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 153750666 . G . PASS END=153750679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 153750680 . G . PASS END=153750680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 153750681 . C . PASS END=153750706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:18:0,47,692:0,47,255:19,0 chr1 153750707 . G . PASS END=153750716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 153750717 . G . PASS END=153750719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 153750720 . C . PASS END=153750721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153750722 . T . PASS END=153750722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:20,0 chr1 153750723 . C . PASS END=153750725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 153750726 . G . PASS END=153750726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 153750727 . C . PASS END=153750728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 153750729 . C . PASS END=153750729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 153750730 . C . PASS END=153750732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 153750733 . C . PASS END=153750733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:20,0 chr1 153750734 . A . PASS END=153750734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 153750735 . G . PASS END=153750744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 153750745 . A . PASS END=153750746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,685:0,55,255:22,0 chr1 153750747 . A . PASS END=153750752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 153750753 . A . PASS END=153750753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 153750754 . C . PASS END=153750776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:25,0 chr1 153750777 . C . PASS END=153750777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 153750778 . A . PASS END=153750779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr1 153750780 . C . PASS END=153750780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:24,0 chr1 153750781 . A . PASS END=153750800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,962:0,71,255:26,0 chr1 153750801 . C . PASS END=153750802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 153750803 . C . PASS END=153750803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 153750804 . T . PASS END=153750807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 153750808 . G . PASS END=153750831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 153750939 . C . PASS END=153751029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:40:0,87,1372:0,87,255:40,0 chr1 153751163 . G . PASS END=153751163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 153751164 . T . PASS END=153751164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 153751165 . G . PASS END=153751167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,892:0,65,255:26,0 chr1 153751168 . C . PASS END=153751172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153751173 . G . PASS END=153751174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 153751175 . T . PASS END=153751177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:27,0 chr1 153751178 . T . PASS END=153751191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr1 153751192 . A . PASS END=153751192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,843:0,45,255:24,0 chr1 153751193 . G . PASS END=153751211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,914:0,62,255:26,0 chr1 153751212 . G . PASS END=153751224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 153751225 . G . PASS END=153751225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153751226 . G . PASS END=153751248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1194:0,86,255:36,0 chr1 153751249 . T . PASS END=153751249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:33,0 chr1 153751250 . T . PASS END=153751254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 153751255 . A . PASS END=153751255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:31,0 chr1 153751256 . A . PASS END=153751336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1169:0,80,255:37,0 chr1 153751337 . A . PASS END=153751337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 153751338 . T . PASS END=153751351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 153751352 . A . PASS END=153751357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 153751358 . T . PASS END=153751361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 153751590 . G . PASS END=153751687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:42:0,90,1388:0,90,255:40,0 chr1 153751819 . G . PASS END=153751838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1172:0,87,255:31,0 chr1 153751839 . A . PASS END=153751839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 153751840 . T . PASS END=153751930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1180:0,92,255:37,0 chr1 153751931 . C . PASS END=153751931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 153751932 . C . PASS END=153751942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 153751943 . G . PASS END=153751949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153752302 . G . PASS END=153752303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 153752304 . G . PASS END=153752308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 153752309 . T . PASS END=153752309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 153752310 . G . PASS END=153752314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 153752315 . C . PASS END=153752322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 153752323 . A . PASS END=153752323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 153752324 . C . PASS END=153752339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1056:0,90,255:30,0 chr1 153752340 . A . PASS END=153752340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 153752341 . G . PASS END=153752341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr1 153752342 . T . PASS END=153752342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 153752343 . T . PASS END=153752343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 153752344 . C . PASS END=153752356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1046:0,80,255:32,0 chr1 153752357 . A . PASS END=153752357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr1 153752358 . G . PASS END=153752387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:34,0 chr1 153752388 . A . PASS END=153752405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1078:0,77,255:26,0 chr1 153752406 . G . PASS END=153752416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 153752417 . C . PASS END=153752417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 153752418 . C . PASS END=153752423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153752424 . G . PASS END=153752424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 153752425 . C . PASS END=153752425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr1 153752426 . C . PASS END=153752432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:25,0 chr1 153752433 . A . PASS END=153752478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,582:0,48,255:19,0 chr1 153761961 . C . PASS END=153761989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,94:3,0 chr1 153761990 . C . PASS END=153762016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 153762017 . C . PASS END=153762051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 153762052 . C . PASS END=153762065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:12,0 chr1 153762066 . C . PASS END=153762066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 153762067 . T . PASS END=153762078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,354:0,36,255:12,0 chr1 153762079 . A . PASS END=153762079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 153762080 . A . PASS END=153762085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 153762086 . A . PASS END=153762094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 153762095 . T . PASS END=153762095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 153762096 . G . PASS END=153762114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,537:0,42,255:19,0 chr1 153762115 . G . PASS END=153762126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:23,0 chr1 153762127 . G . PASS END=153762127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 153762128 . A . PASS END=153762137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 153762138 . A . PASS END=153762138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:19,0 chr1 153762139 . G . PASS END=153762139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153762140 . T . PASS END=153762140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:21,0 chr1 153762141 . C . PASS END=153762148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 153762149 . T . PASS END=153762149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 153762150 . C . PASS END=153762196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:23,0 chr1 153762197 . G . PASS END=153762197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 153762198 . C . PASS END=153762208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 153762209 . A . PASS END=153762209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 153762210 . T . PASS END=153762218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 153762219 . A . PASS END=153762248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,545:0,48,255:19,0 chr1 153762249 . C . PASS END=153762249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 153762250 . C . PASS END=153762252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 153762253 . C . PASS END=153762253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 153762254 . G . PASS END=153762254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153762255 . G . PASS END=153762258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:16:0,33,495:0,35,255:12,0 chr1 153762414 . C . PASS END=153762415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153762416 . T . PASS END=153762418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,419:0,23,255:12,0 chr1 153762419 . C . PASS END=153762420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 153762421 . G . PASS END=153762423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153762424 . T . PASS END=153762424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 153762425 . T . PASS END=153762428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153762429 . G . PASS END=153762429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 153762430 . A . PASS END=153762439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:19,0 chr1 153762440 . T . PASS END=153762441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:22,0 chr1 153762442 . C . PASS END=153762442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 153762443 . T . PASS END=153762443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,668:0,22,255:21,0 chr1 153762444 . T . PASS END=153762452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,848:0,69,255:25,0 chr1 153762453 . C . PASS END=153762453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:24,0 chr1 153762454 . C . PASS END=153762464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,836:0,75,255:26,0 chr1 153762465 . G . PASS END=153762466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153762467 . A . PASS END=153762477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 153762478 . C . PASS END=153762478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:26,0 chr1 153762479 . T . PASS END=153762480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 153762481 . G . PASS END=153762499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,864:0,61,255:26,0 chr1 153762500 . T . PASS END=153762500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,726:0,39,255:21,0 chr1 153762501 . C . PASS END=153762506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 153762507 . C . PASS END=153762507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 153762508 . T . PASS END=153762512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,649:0,66,255:22,0 chr1 153762513 . C . PASS END=153762513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 153762514 . T . PASS END=153762516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr1 153762517 . C . PASS END=153762517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 153762518 . G . PASS END=153762525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,734:0,66,255:22,0 chr1 153762526 . G . PASS END=153762536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,731:0,49,255:19,0 chr1 153762537 . A . PASS END=153762538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 153762539 . G . PASS END=153762550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,645:0,43,255:19,0 chr1 153762551 . A . PASS END=153762552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 153768987 . A . PASS END=153769019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:39:0,88,1399:0,88,255:40,0 chr1 153769020 . T . PASS END=153769039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,111,1391:0,117,255:40,0 chr1 153771959 . T . PASS END=153771967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 153771968 . T . PASS END=153771968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 153771969 . G . PASS END=153771976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 153771977 . T . PASS END=153771977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 153771978 . G . PASS END=153771979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 153771980 . A . PASS END=153771980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 153771981 . G . PASS END=153771994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 153771995 . T . PASS END=153771995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 153771996 . G . PASS END=153771996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr1 153771997 . T . PASS END=153771998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 153771999 . T . PASS END=153771999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:26,0 chr1 153772000 . G . PASS END=153772000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 153772001 . G . PASS END=153772001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 153772002 . G . PASS END=153772006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 153772007 . A . PASS END=153772007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 153772008 . G . PASS END=153772020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1078:0,87,255:30,0 chr1 153772021 . A . PASS END=153772023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr1 153772024 . G . PASS END=153772050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 153772051 . A . PASS END=153772067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,74,255:26,0 chr1 153772068 . T . PASS END=153772069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 153772070 . G . PASS END=153772073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 153772074 . G . PASS END=153772074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 153772075 . C . PASS END=153772077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 153772078 . G . PASS END=153772078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 153772079 . T . PASS END=153772091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 153772092 . C . PASS END=153772092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 153772093 . C . PASS END=153772095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 153772096 . G . PASS END=153772096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 153772097 . G . PASS END=153772104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 153772105 . C . PASS END=153772105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,676:0,32,255:17,0 chr1 153772106 . C . PASS END=153772119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 153772120 . T . PASS END=153772121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:18,0 chr1 153772122 . G . PASS END=153772129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,607:0,40,255:20,0 chr1 153772130 . T . PASS END=153772133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 153772134 . A . PASS END=153772134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 153772135 . G . PASS END=153772135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153772136 . C . PASS END=153772136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 153772137 . C . PASS END=153772138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:23,0 chr1 153772139 . T . PASS END=153772139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 153772140 . G . PASS END=153772152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,878:0,75,255:25,0 chr1 153772153 . A . PASS END=153772153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 153772154 . T . PASS END=153772154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 153772155 . C . PASS END=153772158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 153772159 . G . PASS END=153772159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 153772160 . C . PASS END=153772161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153772162 . T . PASS END=153772162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 153772163 . G . PASS END=153772172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1048:0,84,255:29,0 chr1 153772173 . C . PASS END=153772173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 153772174 . G . PASS END=153772174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:28,0 chr1 153772175 . C . PASS END=153772176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 153772177 . T . PASS END=153772177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr1 153772178 . T . PASS END=153772184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1012:0,90,255:30,0 chr1 153772185 . G . PASS END=153772185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 153772186 . A . PASS END=153772199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:33,0 chr1 153772200 . G . PASS END=153772200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:31,0 chr1 153772201 . G . PASS END=153772212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1296:0,92,255:34,0 chr1 153772213 . T . PASS END=153772213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr1 153772214 . C . PASS END=153772231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:34,0 chr1 153772232 . G . PASS END=153772232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 153772233 . G . PASS END=153772276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1133:0,82,255:33,0 chr1 153772277 . A . PASS END=153772277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 153772278 . G . PASS END=153772278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 153772279 . G . PASS END=153772280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 153772281 . G . PASS END=153772283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 153772284 . T . PASS END=153772307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 153772308 . G . PASS END=153772323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,53,255:19,0 chr1 153772324 . G . PASS END=153772325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 153772326 . A . PASS END=153772379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,621:0,51,255:19,0 chr1 153772380 . G . PASS END=153772383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153772384 . G . PASS END=153772432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,553:0,44,255:19,0 chr1 153772433 . G . PASS END=153772433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 153772434 . T . PASS END=153772434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 153772435 . C . PASS END=153772439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 153772440 . G . PASS END=153772440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 153772441 . C . PASS END=153772451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 153772452 . A . PASS END=153772452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 153772453 . G . PASS END=153772466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 153772467 . G . PASS END=153772470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 153772471 . C . PASS END=153772471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:18,0 chr1 153772472 . T . PASS END=153772486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 153772487 . G . PASS END=153772498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 153772499 . C . PASS END=153772509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 153772510 . T . PASS END=153772510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 153772511 . C . PASS END=153772513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153772514 . G . PASS END=153772515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153772516 . G . PASS END=153772563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 153772564 . G . PASS END=153772564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 153772565 . C . PASS END=153772601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:19,0 chr1 153772602 . C . PASS END=153772614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:22,0 chr1 153772615 . A . PASS END=153772616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 153772617 . G . PASS END=153772620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 153772621 . T . PASS END=153772669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,629:0,41,255:19,0 chr1 153772670 . T . PASS END=153772670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 153772671 . C . PASS END=153772675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 153772676 . C . PASS END=153772676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 153772677 . A . PASS END=153772677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 153772678 . C . PASS END=153772678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:15,0 chr1 153772679 . T . PASS END=153772679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 153772680 . C . PASS END=153772680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 153772681 . C . PASS END=153772681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 153772682 . C . PASS END=153772690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 153772691 . A . PASS END=153772691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 153772692 . C . PASS END=153772692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 153772693 . T . PASS END=153772693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 153772694 . G . PASS END=153772703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,660:0,54,255:18,0 chr1 153772704 . G . PASS END=153772704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:15,0 chr1 153772705 . G . PASS END=153772720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 153772721 . T . PASS END=153772721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 153772722 . G . PASS END=153772729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 153772730 . A . PASS END=153772730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,449:0,15,255:14,0 chr1 153772731 . C . PASS END=153772735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,682:0,51,255:18,0 chr1 153772736 . A . PASS END=153772736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:17,0 chr1 153772737 . C . PASS END=153772745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 153772746 . A . PASS END=153772746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,633:0,27,255:17,0 chr1 153772747 . A . PASS END=153772759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:18,0 chr1 153772760 . A . PASS END=153772760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,501:0,37,255:16,0 chr1 153772761 . A . PASS END=153772761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 153772762 . A . PASS END=153772762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:16,0 chr1 153772763 . T . PASS END=153772763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 153772764 . C . PASS END=153772766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 153772767 . A . PASS END=153772767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,560:0,23,255:16,0 chr1 153772768 . A . PASS END=153772771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr1 153772772 . T . PASS END=153772772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr1 153772773 . C . PASS END=153772773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 153772774 . C . PASS END=153772784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 153772785 . A . PASS END=153772785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,586:0,24,255:14,0 chr1 153772786 . C . PASS END=153772788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 153772789 . A . PASS END=153772789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:20:18:0,20,454:0,20,255:14,0 chr1 153772790 . C . PASS END=153772795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 153772796 . G . PASS END=153772796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 153772797 . C . PASS END=153772799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 153772800 . G . PASS END=153772800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 153772801 . T . LowGQ END=153772801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,390:0,0,255:12,0 chr1 153772802 . T . PASS END=153772802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 153772803 . A . PASS END=153772804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr1 153772805 . C . PASS END=153772807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153772808 . C . PASS END=153772808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 153772809 . T . PASS END=153772812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,458:0,39,255:13,0 chr1 153772813 . T . PASS END=153772813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 153772814 . C . PASS END=153772816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 153772817 . G . PASS END=153772817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 153772818 . C . PASS END=153772821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 153772822 . T . PASS END=153772823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 153772824 . C . PASS END=153772825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 153772826 . C . PASS END=153772826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 153772827 . C . PASS END=153772828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 153772829 . T . PASS END=153772830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,405:0,25,255:12,0 chr1 153772831 . C . PASS END=153772832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153772833 . C . PASS END=153772833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 153772834 . C . PASS END=153772835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153772836 . G . PASS END=153772836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 153772837 . G . PASS END=153772838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153772839 . G . PASS END=153772839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 153772840 . G . PASS END=153772841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 153772842 . T . PASS END=153772842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr1 153772843 . C . PASS END=153772861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 153772862 . A . PASS END=153772862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 153772863 . C . PASS END=153772867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 153772868 . A . PASS END=153772868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 153772869 . A . PASS END=153772871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 153772872 . T . PASS END=153772895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:8:0,21,258:0,23,255:9,0 chr1 153782653 . T . PASS END=153782654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 153782655 . A . PASS END=153782655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 153782656 . T . PASS END=153782665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:24,0 chr1 153782666 . C . PASS END=153782679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,992:0,81,255:36,0 chr1 153782680 . T . PASS END=153782680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:35,0 chr1 153782681 . A . PASS END=153782723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1280:0,92,255:38,0 chr1 153782724 . G . PASS END=153782724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:34,0 chr1 153782725 . G . PASS END=153782782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1172:0,83,255:35,0 chr1 153782783 . A . PASS END=153782786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 153784207 . C . PASS END=153784209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,470:0,45,255:15,0 chr1 153784210 . G . PASS END=153784210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 153784211 . C . PASS END=153784217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 153784218 . A . PASS END=153784220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:15,0 chr1 153784221 . A . PASS END=153784237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr1 153784238 . C . PASS END=153784238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153784239 . A . PASS END=153784239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 153784240 . A . PASS END=153784240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 153784241 . C . PASS END=153784242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 153784243 . G . PASS END=153784248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 153784249 . C . PASS END=153784254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 153784255 . C . PASS END=153784256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153784257 . A . PASS END=153784258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 153784259 . G . PASS END=153784259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153784260 . T . PASS END=153784261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,640:0,49,255:20,0 chr1 153784262 . T . PASS END=153784263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 153784264 . A . PASS END=153784264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153784265 . A . PASS END=153784269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 153784270 . T . PASS END=153784270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 153784271 . G . PASS END=153784272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153784273 . A . PASS END=153784273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:19,0 chr1 153784274 . G . PASS END=153784274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153784275 . C . PASS END=153784276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 153784277 . G . PASS END=153784278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153784279 . C . PASS END=153784292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 153784293 . C . PASS END=153784293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 153784294 . C . PASS END=153784324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 153784498 . C . PASS END=153784600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:32:0,87,1158:0,90,255:40,0 chr1 153784601 . T . PASS END=153784601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:28,0 chr1 153784602 . C . PASS END=153784607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1154:0,83,255:30,0 chr1 153784608 . C . PASS END=153784608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 153785725 . C . PASS END=153785725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 153785726 . C . PASS END=153785728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 153785729 . T . PASS END=153785729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 153785730 . T . PASS END=153785730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 153785731 . C . PASS END=153785731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 153785732 . C . PASS END=153785740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr1 153785741 . G . PASS END=153785741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 153785742 . G . PASS END=153785743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 153785744 . T . PASS END=153785744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,676:0,32,255:20,0 chr1 153785745 . T . PASS END=153785745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 153785746 . T . PASS END=153785749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 153785750 . A . PASS END=153785750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 153785751 . A . PASS END=153785753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153785754 . G . PASS END=153785754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 153785755 . C . PASS END=153785755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 153785756 . A . PASS END=153785760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153785761 . T . PASS END=153785761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 153785762 . C . PASS END=153785781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,678:0,60,255:26,0 chr1 153785782 . C . PASS END=153785783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 153785784 . T . PASS END=153785784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr1 153785785 . T . PASS END=153785788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 153785789 . A . PASS END=153785789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:25,0 chr1 153785790 . G . PASS END=153785801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:28,0 chr1 153785802 . T . PASS END=153785802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,826:0,67,255:27,0 chr1 153785803 . T . PASS END=153785805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 153785806 . A . PASS END=153785807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 153785808 . G . PASS END=153785815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1363:0,95,255:34,0 chr1 153785816 . C . PASS END=153785816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:32,0 chr1 153785817 . T . PASS END=153785819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1225:0,86,255:32,0 chr1 153785820 . T . PASS END=153785820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:30,0 chr1 153785821 . C . PASS END=153785829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:35,0 chr1 153785830 . T . PASS END=153785830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1122:0,66,255:34,0 chr1 153785831 . C . PASS END=153785834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1279:0,89,255:35,0 chr1 153785835 . C . PASS END=153785835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:32,0 chr1 153785836 . C . PASS END=153785837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 153785838 . T . PASS END=153785838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:32,0 chr1 153785839 . T . PASS END=153785892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:36:0,82,1296:0,82,255:38,0 chr1 153785893 . A . PASS END=153785893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1209:0,78,255:33,0 chr1 153785894 . G . PASS END=153785917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1172:0,85,255:34,0 chr1 153785918 . A . PASS END=153785928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr1 153785930 . T . PASS END=153785930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 153788749 . C . PASS END=153788749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 153788750 . T . PASS END=153788750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 153788751 . T . PASS END=153788759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:65:23:0,65,809:0,65,255:26,0 chr1 153788760 . A . PASS END=153788766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 153788767 . T . PASS END=153788767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 153788768 . C . PASS END=153788890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1220:0,87,255:40,0 chr1 153788891 . T . PASS END=153788891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:69:50:0,69,1388:0,69,255:40,0 chr1 153788892 . T . PASS END=153788892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 153788893 . T . PASS END=153788893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1668:0,78,255:40,0 chr1 153788894 . G . PASS END=153788957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:36:0,81,1371:0,81,255:40,0 chr1 153788958 . A . PASS END=153788958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:34,0 chr1 153788959 . G . PASS END=153788973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1327:0,95,255:35,0 chr1 153788974 . T . PASS END=153788974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 153788975 . G . PASS END=153789002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:98:37:0,98,1357:0,98,255:37,0 chr1 153789003 . G . PASS END=153789003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:35,0 chr1 153789004 . C . PASS END=153789051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1172:0,81,255:37,0 chr1 153789052 . A . PASS END=153789052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:28,0 chr1 153789053 . A . PASS END=153789054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 153789055 . A . PASS END=153789055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 153789056 . A . PASS END=153789064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153789848 . C . PASS END=153789848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:23,0 chr1 153789849 . G . PASS END=153789849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 153789850 . G . PASS END=153789853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 153789854 . A . PASS END=153789854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 153789855 . T . PASS END=153789864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:31,0 chr1 153789865 . C . PASS END=153789865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 153789866 . G . PASS END=153790018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:31:0,80,1142:0,80,255:40,0 chr1 153790516 . C . PASS END=153790532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 153790533 . T . PASS END=153790533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,615:0,30,255:19,0 chr1 153790534 . T . PASS END=153790538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 153790539 . G . PASS END=153790552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 153790553 . G . PASS END=153790601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1033:0,84,255:33,0 chr1 153790602 . C . PASS END=153790602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 153790603 . A . PASS END=153790614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 153790615 . A . PASS END=153790615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 153790616 . A . PASS END=153790616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153790617 . C . PASS END=153790620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153790621 . A . PASS END=153790636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:25,0 chr1 153790637 . A . PASS END=153790641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 153790642 . T . PASS END=153790642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:18,0 chr1 153790643 . G . PASS END=153790648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 153791263 . T . PASS END=153791263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 153791266 . C . PASS END=153791266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 153791267 . C . PASS END=153791267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1078:0,49,255:30,0 chr1 153791268 . T . PASS END=153791282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:32:0,88,1122:0,88,255:34,0 chr1 153791283 . T . PASS END=153791283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1191:0,77,255:32,0 chr1 153791284 . C . PASS END=153791398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,86,255:40,0 chr1 153792082 . C . PASS END=153792206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:33:0,87,1305:0,97,255:40,0 chr1 153792207 . G . PASS END=153792207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:27,0 chr1 153792208 . C . PASS END=153792211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1155:0,90,255:30,0 chr1 153800487 . A . PASS END=153800487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 153800488 . C . PASS END=153800493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:30,0 chr1 153800494 . T . PASS END=153800494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 153800495 . C . PASS END=153800783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1133:0,81,255:40,1 chr1 153800784 . A . PASS END=153800784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr1 153800785 . C . PASS END=153800814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1177:0,80,255:32,0 chr1 153800815 . T . PASS END=153800815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:28,0 chr1 153800816 . C . PASS END=153800823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 153902773 . C . PASS END=153902807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,872:0,62,255:26,0 chr1 153902808 . A . PASS END=153902808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 153902809 . G . PASS END=153902816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 153902817 . C . PASS END=153902846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1147:0,80,255:30,0 chr1 153902847 . G . PASS END=153902850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr1 153902851 . C . PASS END=153902851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153902852 . A . PASS END=153902882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,884:0,72,255:26,0 chr1 153902883 . T . PASS END=153902883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 153902884 . G . PASS END=153902903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:23,0 chr1 153902904 . T . PASS END=153902904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 153902905 . C . PASS END=153902911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 153902912 . A . PASS END=153902918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 153903015 . C . PASS END=153903079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,111,1484:0,112,255:40,0 chr1 153903168 . C . PASS END=153903176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 153903177 . T . PASS END=153903177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 153903178 . G . PASS END=153903204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1157:0,93,255:31,0 chr1 153903205 . T . PASS END=153903205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 153903206 . T . PASS END=153903239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1164:0,93,255:31,0 chr1 153903240 . T . PASS END=153903240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 153903241 . T . PASS END=153903258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1035:0,87,255:30,0 chr1 153903259 . G . PASS END=153903259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 153903260 . C . PASS END=153903274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:29,0 chr1 153903275 . T . PASS END=153903276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153903277 . C . PASS END=153903277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153903278 . C . PASS END=153903286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 153903287 . G . PASS END=153903287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:24,0 chr1 153903288 . G . PASS END=153903301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,67,255:25,0 chr1 153903302 . G . PASS END=153903315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:19:0,48,720:0,57,255:18,0 chr1 153903316 . C . PASS END=153903316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:15,0 chr1 153903317 . C . PASS END=153903320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 153903321 . T . PASS END=153903321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 153903322 . G . PASS END=153903333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 153903423 . T . PASS END=153903430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 153903431 . C . PASS END=153903431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153903432 . T . PASS END=153903432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 153903433 . C . PASS END=153903434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153903435 . A . PASS END=153903436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 153903437 . A . PASS END=153903437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153903438 . G . PASS END=153903442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 153903443 . T . PASS END=153903443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 153903444 . A . PASS END=153903455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,660:0,41,255:18,0 chr1 153903456 . A . PASS END=153903456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 153903457 . G . PASS END=153903480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 153903481 . A . PASS END=153903481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:17,0 chr1 153903482 . T . PASS END=153903516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,621:0,48,255:17,0 chr1 153903517 . A . PASS END=153903517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:14,0 chr1 153903518 . G . PASS END=153903521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 153903522 . T . PASS END=153903533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 153903534 . A . PASS END=153903534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 153903535 . T . PASS END=153903540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 153904680 . C . PASS END=153904693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,415:0,36,255:13,0 chr1 153904694 . G . PASS END=153904698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 153904699 . T . PASS END=153904699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 153904700 . C . PASS END=153904700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 153904701 . A . PASS END=153904701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 153904702 . C . PASS END=153904703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 153904704 . G . PASS END=153904704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 153904705 . G . PASS END=153904724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr1 153904725 . T . PASS END=153904731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153904732 . C . PASS END=153904733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 153904734 . G . PASS END=153904745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr1 153904746 . C . PASS END=153904746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153904747 . C . PASS END=153904759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:26,0 chr1 153904760 . A . PASS END=153904763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153904764 . A . PASS END=153904764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,742:0,50,255:25,0 chr1 153904765 . A . PASS END=153904768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 153904769 . T . PASS END=153904769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 153904770 . C . PASS END=153904779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 153904780 . A . PASS END=153904780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,907:0,67,255:27,0 chr1 153904781 . T . PASS END=153904807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1016:0,84,255:31,0 chr1 153904808 . A . PASS END=153904808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 153904809 . C . PASS END=153904864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1200:0,83,255:33,0 chr1 153904865 . C . PASS END=153904865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 153904866 . C . PASS END=153904867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1019:0,54,255:25,0 chr1 153904868 . G . PASS END=153904872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1070:0,74,255:26,0 chr1 153904873 . C . PASS END=153904873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153904874 . T . PASS END=153904878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:23,0 chr1 153904879 . T . PASS END=153904879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:19,0 chr1 153904880 . A . PASS END=153904882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 153904883 . C . PASS END=153904883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:19,0 chr1 153904884 . C . PASS END=153904884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,67,255:20,0 chr1 153904885 . C . PASS END=153904916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:19:0,50,670:0,50,255:19,0 chr1 153905118 . C . PASS END=153905127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr1 153905128 . C . PASS END=153905135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153905136 . G . PASS END=153905179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:19,0 chr1 153905180 . G . PASS END=153905197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 153905198 . C . PASS END=153905200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153905201 . G . PASS END=153905201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153905202 . G . PASS END=153905211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 153905212 . T . PASS END=153905241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,717:0,63,255:22,0 chr1 153905242 . G . PASS END=153905242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,686:0,27,255:20,0 chr1 153905243 . G . PASS END=153905244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153905245 . C . PASS END=153905245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153905246 . T . PASS END=153905247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153905248 . G . PASS END=153905249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 153905250 . G . PASS END=153905251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153905252 . C . PASS END=153905253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 153905337 . C . PASS END=153905339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 153905340 . G . PASS END=153905503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,980:0,81,255:40,0 chr1 153905504 . A . PASS END=153905504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:27,0 chr1 153905505 . A . PASS END=153905506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 153905673 . T . PASS END=153905673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:40,0 chr1 153905674 . T . PASS END=153905795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:41:0,88,1485:0,88,255:40,0 chr1 153905959 . C . PASS END=153905966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 153905967 . C . PASS END=153905973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,743:0,60,255:21,0 chr1 153905974 . T . PASS END=153905974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 153905975 . C . PASS END=153905976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153905977 . A . PASS END=153905986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153905987 . C . PASS END=153905993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 153905994 . G . PASS END=153905994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 153905995 . C . PASS END=153905998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 153905999 . A . PASS END=153906007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,774:0,50,255:19,0 chr1 153906008 . A . PASS END=153906008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,664:0,35,255:18,0 chr1 153906009 . T . PASS END=153906023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:17:0,50,592:0,50,255:17,0 chr1 153906024 . C . PASS END=153906024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 153906025 . T . PASS END=153906032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr1 153906033 . G . PASS END=153906033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 153906034 . C . PASS END=153906034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 153906035 . A . PASS END=153906035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 153906036 . G . PASS END=153906051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr1 153906052 . A . PASS END=153906052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:16,0 chr1 153906053 . G . PASS END=153906060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 153906061 . A . PASS END=153906074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 153906075 . G . PASS END=153906075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 153906076 . G . PASS END=153906076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153906077 . G . PASS END=153906077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 153906078 . A . PASS END=153906079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153906080 . T . PASS END=153906109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,47,255:18,0 chr1 153906110 . C . PASS END=153906110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr1 153906111 . G . PASS END=153906112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 153906113 . G . PASS END=153906113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153906114 . C . PASS END=153906126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 153906127 . T . PASS END=153906147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,413:0,36,255:13,0 chr1 153906148 . C . PASS END=153906148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 153906149 . T . PASS END=153906158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 153906159 . C . PASS END=153906177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 153906178 . A . PASS END=153906178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 153906179 . C . PASS END=153906205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr1 153906206 . T . PASS END=153906257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 153906258 . C . PASS END=153906258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 153906259 . C . PASS END=153906283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 153906284 . A . PASS END=153906304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:6,0 chr1 153906305 . A . PASS END=153906347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 153906611 . T . PASS END=153906613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 153906614 . G . PASS END=153906645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:19,0 chr1 153906646 . C . PASS END=153906658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 153906659 . C . PASS END=153906661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153906662 . G . PASS END=153906720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:24,0 chr1 153906721 . G . PASS END=153906721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 153906722 . C . PASS END=153906724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,930:0,72,255:24,0 chr1 153906725 . A . PASS END=153906725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr1 153906726 . A . PASS END=153906730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 153906731 . T . PASS END=153906731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 153906732 . C . PASS END=153906743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 153906744 . A . PASS END=153906767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 153906768 . C . PASS END=153906778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:14:0,35,540:0,35,255:12,0 chr1 153907236 . C . PASS END=153907277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:24:0,45,675:0,56,255:19,0 chr1 153907278 . CCTGCTGCTG C,CCTGCTG, 47.91 PASS DP=36;MQ=248.17;MQRankSum=3.885;ReadPosRankSum=1.318;FractionInformativeReads=0.944;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,5,0:0.412,0.147,0.000:34:6,4,3,0:9,10,2,0:47:57,0,50,271,321,322,317,381,579,626:255,0,255:15,22:4.7911e+01,9.1896e-05,5.3000e+01,2.7077e+02,3.3028e+02,3.2457e+02,3.4294e+02,4.1550e+02,4.5000e+02,4.5000e+02:0.00,9.00,12.00,9.00,18.00,12.00,34.77,43.77,43.77,37.77:7,8,13,6:8,7,11,8 chr1 153907279 . C . LowGQ END=153907288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:24,16:40:0:34:0,0,0:255,0,255:32,22 chr1 153907289 . T . PASS END=153907293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:33,0 chr1 153907294 . C . PASS END=153907294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr1 153907295 . T . PASS END=153907296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 153907297 . C . PASS END=153907297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1156:0,28,255:33,0 chr1 153907298 . T . PASS END=153907305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,99,1485:0,105,255:37,0 chr1 153907306 . T . PASS END=153907306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:26:40:0,26,1286:0,26,255:35,1 chr1 153907307 . T . PASS END=153907334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:83:39:0,83,1412:0,83,255:40,1 chr1 153907335 . T . PASS END=153907403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1155:0,80,255:40,0 chr1 153907404 . C . PASS END=153907435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,860:0,61,255:26,0 chr1 153907436 . A . PASS END=153907436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:22,0 chr1 153907437 . C . PASS END=153907439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 153907440 . C . PASS END=153907440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 153908536 . C . PASS END=153908658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,85,255:40,0 chr1 153908659 . A . PASS END=153908659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:25,0 chr1 153908660 . C . PASS END=153908660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 153908661 . A . PASS END=153908664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 153909018 . C . PASS END=153909031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 153909032 . C . PASS END=153909037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 153909038 . T . PASS END=153909038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 153909039 . G . PASS END=153909055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,939:0,72,255:26,0 chr1 153909056 . G . PASS END=153909056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 153909057 . C . PASS END=153909059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 153909060 . C . PASS END=153909060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 153909061 . A . PASS END=153909061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 153909062 . C . PASS END=153909063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 153909064 . T . PASS END=153909064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 153909065 . G . PASS END=153909068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 153909069 . G C, 48.84 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=3.432;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,13,0:0.433,0.000:30:8,6,0:9,7,0:47:84,0,50,465,608,1073:255,0,255:17,0:4.8838e+01,7.8435e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,7,6:7,10,8,5 chr1 153909070 . G . PASS END=153909077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 153909078 . C . PASS END=153909078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:27,0 chr1 153909079 . A . PASS END=153909106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1141:0,93,255:32,0 chr1 153909107 . G . PASS END=153909116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 153909117 . A . PASS END=153909117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 153909118 . G . PASS END=153909122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 153909123 . A . PASS END=153909137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,76,255:26,0 chr1 153909138 . C . PASS END=153909145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 153909146 . A . PASS END=153909164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 153909165 . G . PASS END=153909165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 153909166 . G . PASS END=153909167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 153909168 . C . PASS END=153909168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 153909169 . C . PASS END=153909171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 153909172 . A . PASS END=153909172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 153909173 . G . PASS END=153909175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 153909176 . C . PASS END=153909176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 153909177 . A . PASS END=153909181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 153909182 . C . PASS END=153909182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 153909183 . A . PASS END=153909213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,630:0,41,255:19,0 chr1 153909214 . A . PASS END=153909214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr1 153909215 . C . PASS END=153909217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 153909218 . T . PASS END=153909218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 153909219 . C . PASS END=153909223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 153909224 . C . PASS END=153909224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 153909964 . C . PASS END=153909975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,894:0,62,255:26,0 chr1 153909976 . G . PASS END=153910090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:27:0,80,994:0,80,255:40,0 chr1 153910200 . C . PASS END=153910200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr1 153910201 . A . PASS END=153910208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 153910209 . G . PASS END=153910211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 153910212 . G . PASS END=153910213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153910214 . G . PASS END=153910214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr1 153910215 . G . PASS END=153910233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,795:0,63,255:25,0 chr1 153910234 . A . PASS END=153910234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 153910235 . G . PASS END=153910242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 153910243 . C . PASS END=153910257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:31,0 chr1 153910258 . T . PASS END=153910259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 153910260 . A . PASS END=153910262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 153910263 . A . PASS END=153910263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1038:0,77,255:30,0 chr1 153910264 . C . PASS END=153910276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1066:0,93,255:31,0 chr1 153910277 . T . PASS END=153910277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:30,0 chr1 153910278 . C . PASS END=153910278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 153910279 . C . PASS END=153910279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 153910280 . T . PASS END=153910283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1156:0,93,255:31,0 chr1 153910284 . A . PASS END=153910284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 153910285 . G . PASS END=153910297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 153910298 . C . PASS END=153910298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:27,0 chr1 153910299 . A . PASS END=153910309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 153910310 . C . PASS END=153910313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153910314 . T . PASS END=153910314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:23,0 chr1 153910315 . C . PASS END=153910324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:23,0 chr1 153910325 . C . PASS END=153910339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,50,255:18,0 chr1 153911376 . C . PASS END=153911521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:37:0,90,1350:0,95,255:40,0 chr1 153912065 . C . PASS END=153912073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 153912074 . A . PASS END=153912075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 153912076 . A . PASS END=153912076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 153912077 . A . PASS END=153912080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 153912081 . G . PASS END=153912081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 153912082 . T . PASS END=153912086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 153912087 . A . PASS END=153912088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 153912089 . C . PASS END=153912093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 153912094 . C . PASS END=153912094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 153912095 . G . PASS END=153912096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 153912097 . G . PASS END=153912097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 153912098 . C . PASS END=153912112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,861:0,66,255:23,0 chr1 153912113 . C . PASS END=153912113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 153912114 . C . PASS END=153912145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:28,0 chr1 153912146 . C . PASS END=153912146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 153912147 . C . PASS END=153912147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 153912148 . T . PASS END=153912153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 153912154 . A . PASS END=153912159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:26,0 chr1 153912160 . G . PASS END=153912160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 153912161 . C . PASS END=153912161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr1 153912162 . C . PASS END=153912175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1089:0,80,255:31,0 chr1 153912176 . A . PASS END=153912176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 153912177 . G . PASS END=153912183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:34,0 chr1 153912184 . T . PASS END=153912184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr1 153912185 . G . PASS END=153912244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1115:0,80,255:35,0 chr1 153912245 . A . PASS END=153912245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr1 153912246 . C . PASS END=153912249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 153912250 . A . PASS END=153912250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 153912251 . G . PASS END=153912254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 153912255 . T . PASS END=153912255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 153912256 . G . PASS END=153912263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153912264 . C . PASS END=153912280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr1 153912632 . T . PASS END=153912633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr1 153912634 . T . PASS END=153912634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 153912635 . G . PASS END=153912636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1015:0,84,255:28,0 chr1 153912637 . T . PASS END=153912637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 153912638 . C . PASS END=153912641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 153912642 . C . PASS END=153912646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 153912647 . G . PASS END=153912654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153912655 . T . PASS END=153912656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,808:0,70,255:27,0 chr1 153912657 . T . PASS END=153912660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153912661 . A . PASS END=153912662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153912663 . T . PASS END=153912663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 153912664 . G . PASS END=153912664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 153912665 . T . PASS END=153912665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 153912666 . G . PASS END=153912666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153912667 . G . PASS END=153912685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:26,0 chr1 153912686 . G . PASS END=153912687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:23:0,50,768:0,50,255:20,0 chr1 153912688 . C . PASS END=153912695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 153912696 . C . PASS END=153912698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr1 153912699 . G . PASS END=153912699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153912700 . G . PASS END=153912732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 153912907 . T . PASS END=153912908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153912909 . G . PASS END=153912909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr1 153912910 . A . PASS END=153912911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 153912912 . G . PASS END=153912912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 153912913 . A . PASS END=153912926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 153912927 . A . PASS END=153912928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153912929 . G . PASS END=153912940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1305:0,90,255:30,0 chr1 153912941 . T . PASS END=153912941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 153912942 . G . PASS END=153912951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1127:0,82,255:33,0 chr1 153912952 . G . PASS END=153912952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr1 153912953 . G . PASS END=153912978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1244:0,89,255:35,0 chr1 153912979 . G . PASS END=153912979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:29,0 chr1 153912980 . A . PASS END=153912997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1202:0,83,255:30,0 chr1 153912998 . A . PASS END=153912999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153913000 . G . PASS END=153913010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1209:0,86,255:28,0 chr1 153913011 . A . PASS END=153913036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,922:0,62,255:26,0 chr1 153913037 . G . PASS END=153913038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,945:0,42,255:26,0 chr1 153913039 . C . PASS END=153913052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,64,255:26,0 chr1 153913053 . G . PASS END=153913077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 153913078 . A . PASS END=153913078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:13,0 chr1 153913079 . T . PASS END=153913082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 153913380 . C . PASS END=153913381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153913382 . A . PASS END=153913401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,884:0,66,255:26,0 chr1 153913402 . C . PASS END=153913407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 153913408 . A . PASS END=153913411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 153913412 . G . PASS END=153913459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:30,0 chr1 153913460 . C . PASS END=153913460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 153913461 . C . PASS END=153913469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 153913470 . T . PASS END=153913470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 153913471 . G . PASS END=153913478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 153913479 . C . PASS END=153913479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 153913480 . A . PASS END=153913484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153913485 . A . PASS END=153913500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:25,0 chr1 153913501 . A . PASS END=153913501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 153913502 . G . PASS END=153913520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 153913521 . A . PASS END=153913524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:19,0 chr1 153913707 . C . PASS END=153913707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr1 153913708 . T . PASS END=153913709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:28,0 chr1 153913710 . A . PASS END=153913755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1136:0,80,255:33,0 chr1 153913756 . A . PASS END=153913756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr1 153913757 . G . PASS END=153913757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 153913758 . G . PASS END=153913758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 153913759 . G . PASS END=153913765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 153913850 . C . PASS END=153913851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 153913852 . G . PASS END=153913857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153913858 . G . PASS END=153913871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:14:0,31,540:0,31,255:13,0 chr1 153913872 . T . PASS END=153913872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 153913873 . G . PASS END=153913880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 153913881 . G . PASS END=153913882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 153913883 . G . PASS END=153913884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 153913885 . A . PASS END=153913916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 153914345 . G . PASS END=153914345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 153914346 . C . PASS END=153914347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 153914348 . T . LowGQ END=153914349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:0:16:0,0,451:0,0,255:14,0 chr1 153914350 . C . PASS END=153914350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,527:0,17,255:14,0 chr1 153914351 . A . PASS END=153914351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:14,0 chr1 153914352 . A . PASS END=153914352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 153914353 . G . LowGQ END=153914354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:4,0,255:15,0 chr1 153914355 . G . PASS END=153914355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 153914356 . T . PASS END=153914356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 153914357 . A . PASS END=153914357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:14,0 chr1 153914358 . G . PASS END=153914358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 153914359 . G . PASS END=153914360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:15,0 chr1 153914361 . G . PASS END=153914361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:15,0 chr1 153914362 . G . PASS END=153914362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr1 153914363 . T . PASS END=153914363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 153914364 . G . PASS END=153914377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,582:0,40,255:19,0 chr1 153914378 . G . PASS END=153914394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,838:0,61,255:26,0 chr1 153914395 . G . PASS END=153914506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1055:0,80,255:34,0 chr1 153914507 . A . PASS END=153914507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr1 153914508 . G . PASS END=153914524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr1 153914525 . G . PASS END=153914565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,65,255:26,0 chr1 153914566 . G . PASS END=153914589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:19:0,44,662:0,44,255:20,0 chr1 153914663 . C . PASS END=153914664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153914665 . T . PASS END=153914665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:19,0 chr1 153914666 . A . PASS END=153914689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:23,0 chr1 153914690 . A . PASS END=153914690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 153914691 . A . PASS END=153914707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 153914708 . C . PASS END=153914758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1064:0,80,255:34,0 chr1 153914759 . C . PASS END=153914760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1039:0,71,255:27,0 chr1 153914761 . G . PASS END=153914762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153914763 . C . PASS END=153914802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr1 153914803 . T . PASS END=153914803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 153914804 . G . PASS END=153914806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 153914807 . C . PASS END=153914814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr1 153914815 . G . PASS END=153914815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:17,0 chr1 153914816 . G . PASS END=153914821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 153914822 . G . PASS END=153914822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,580:0,24,255:15,0 chr1 153914823 . C . PASS END=153914832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr1 153915032 . C . PASS END=153915074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1205:0,93,255:34,0 chr1 153915075 . A . PASS END=153915090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 153915091 . G . PASS END=153915101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:42:23:0,42,630:0,45,255:19,0 chr1 153915354 . C . PASS END=153915389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:16,0 chr1 153915390 . A . PASS END=153915390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 153915391 . G . PASS END=153915400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:18,0 chr1 153915401 . T . PASS END=153915401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 153915402 . G . PASS END=153915405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 153915406 . T . PASS END=153915406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153915407 . C . PASS END=153915475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,613:0,40,255:19,0 chr1 153915476 . C . PASS END=153915476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr1 153915477 . C . PASS END=153915506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,668:0,57,255:19,0 chr1 153915507 . C . PASS END=153915508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 153915509 . C . PASS END=153915526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 153915527 . G . PASS END=153915529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 153915530 . T . PASS END=153915584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,630:0,41,255:19,0 chr1 153915585 . T . PASS END=153915585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 153915586 . T . PASS END=153915589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153915590 . T . PASS END=153915606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 153916534 . C . PASS END=153916569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,764:0,63,255:24,0 chr1 153916570 . C . PASS END=153916570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 153916571 . G . PASS END=153916582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 153916583 . C . PASS END=153916583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 153916584 . G . PASS END=153916590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:26,0 chr1 153916591 . G . PASS END=153916594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 153916595 . C . PASS END=153916595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 153916596 . A . PASS END=153916600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153916601 . G . PASS END=153916605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,990:0,71,255:25,0 chr1 153916606 . C . PASS END=153916607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:22,0 chr1 153916608 . A . PASS END=153916612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,71,255:24,0 chr1 153916613 . T . PASS END=153916613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 153916614 . G . PASS END=153916619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,930:0,72,255:24,0 chr1 153916620 . C . PASS END=153916620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 153916621 . A . PASS END=153916621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 153916622 . A . PASS END=153916622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 153916623 . G . PASS END=153916646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:25,0 chr1 153916647 . G . PASS END=153916649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 153916650 . G . PASS END=153916650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 153916651 . C . PASS END=153916704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,784:0,63,255:26,0 chr1 153916705 . T . PASS END=153916708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 153916709 . T . PASS END=153916709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 153916710 . G . PASS END=153916710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 153916711 . A . PASS END=153916715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 153916716 . C . PASS END=153916852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1202:0,82,255:39,1 chr1 153916853 . C . PASS END=153916853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:51:34:0,51,1173:0,51,255:28,1 chr1 153916854 . C . PASS END=153916854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:30,0 chr1 153916855 . C . PASS END=153916859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:31,0 chr1 153916860 . C . PASS END=153916861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1176:0,69,255:31,0 chr1 153916862 . C . PASS END=153916864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:31,0 chr1 153916865 . T . PASS END=153916865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:28,0 chr1 153916866 . C . PASS END=153916869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 153916870 . G . PASS END=153916870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:27,0 chr1 153916871 . C . PASS END=153916873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 153917611 . C . PASS END=153917618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 153917619 . A . PASS END=153917620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153920286 . G A, 49.93 PASS DP=31;MQ=250.00;MQRankSum=4.724;ReadPosRankSum=1.443;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,15,0:0.484,0.000:31:7,11,0:9,4,0:47:85,0,47,185,185,185:255,0,255:14,0:4.9929e+01,8.7495e-05,5.0000e+01,1.8470e+02,2.1947e+02,1.8771e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,9,9,6:8,8,7,8 chr1 153920585 . T . PASS END=153920601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 153920602 . T . PASS END=153920607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 153920608 . A . PASS END=153920608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 153920609 . T . PASS END=153920612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 153920613 . T . PASS END=153920613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 153920614 . C . PASS END=153920639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:26,0 chr1 153920640 . G . PASS END=153920644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153920645 . G . PASS END=153920659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,71,255:26,0 chr1 153920660 . G . PASS END=153920661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 153920662 . T . PASS END=153920734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,831:0,62,255:27,0 chr1 153920735 . T . PASS END=153920735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:25,0 chr1 153920736 . G . PASS END=153920749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,868:0,61,255:26,0 chr1 153920750 . A . PASS END=153920750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:21,0 chr1 153920751 . G . PASS END=153920751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 153920752 . G . PASS END=153920752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:19,0 chr1 153920753 . C . PASS END=153920754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 153920755 . C . PASS END=153920771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr1 153920772 . G . PASS END=153920772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:16,0 chr1 153920773 . C . PASS END=153920789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,615:0,40,255:17,0 chr1 153920790 . C . PASS END=153920790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 153920791 . C . PASS END=153920795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,712:0,44,255:19,0 chr1 153920796 . G . PASS END=153920798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153920799 . G . PASS END=153920805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,751:0,47,255:19,0 chr1 153920934 . C . PASS END=153920939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 153920940 . G . PASS END=153920943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153920944 . G . PASS END=153920944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 153920945 . A . PASS END=153920951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,955:0,75,255:26,0 chr1 153920952 . G . PASS END=153920954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153920955 . C . PASS END=153921000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,939:0,64,255:26,0 chr1 153921001 . G . PASS END=153921001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 153921002 . T . PASS END=153921023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr1 153921024 . T . PASS END=153921039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,919:0,81,255:29,0 chr1 153921040 . T . PASS END=153921040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:27,0 chr1 153921041 . A . PASS END=153921055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153921056 . T . PASS END=153921073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,980:0,70,255:26,0 chr1 153921074 . T . PASS END=153921074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153921075 . C . PASS END=153921095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 153921096 . G . PASS END=153921096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr1 153921097 . G . PASS END=153921098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 153921099 . T . PASS END=153921099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:21,0 chr1 153921100 . C . PASS END=153921100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 153921101 . T . PASS END=153921120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:44:21:0,44,810:0,44,255:19,0 chr1 153921365 . T . PASS END=153921376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1512:0,120,255:40,0 chr1 153921591 . A . PASS END=153921594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 153921595 . C . PASS END=153921601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 153921602 . T . PASS END=153921602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 153921603 . G . PASS END=153921604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 153921605 . A . PASS END=153921605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 153921606 . G . PASS END=153921613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 153921614 . T . PASS END=153921629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 153921630 . C . PASS END=153921635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 153921636 . C . PASS END=153921636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 153921637 . C . PASS END=153921651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:22,0 chr1 153921652 . C . PASS END=153921705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,607:0,50,255:19,0 chr1 153921706 . G . PASS END=153921706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153921707 . A . PASS END=153921713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 153921714 . C . PASS END=153921725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 153921726 . C . PASS END=153921726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 153921727 . T . PASS END=153921728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 153921729 . A . PASS END=153921729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 153921730 . G . PASS END=153921734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:11,0 chr1 153921735 . C . PASS END=153921738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 153921739 . C . PASS END=153921740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 153921741 . T . PASS END=153921743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 153921744 . C . PASS END=153921744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 153921745 . T . PASS END=153921745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr1 153921746 . G . PASS END=153921757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:10,0 chr1 153921758 . T . PASS END=153921758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 153921759 . T . PASS END=153921767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 153921768 . G . PASS END=153921769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 153921770 . G . PASS END=153921770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 153921771 . C . PASS END=153921779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 153921780 . C . PASS END=153921783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 153921784 . A . PASS END=153921785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 153921786 . C . PASS END=153921786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 153921787 . A . PASS END=153921844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,252:9,0 chr1 153921845 . T . PASS END=153921860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 153923736 . C . PASS END=153923736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 153923737 . T . PASS END=153923737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 153923738 . G . PASS END=153923755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:24,0 chr1 153923756 . T . PASS END=153923756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 153923757 . G . PASS END=153923774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,923:0,62,255:26,0 chr1 153923775 . A . PASS END=153923775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 153923776 . A . PASS END=153923783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,864:0,64,255:25,0 chr1 153923784 . G . PASS END=153923784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:23,0 chr1 153923785 . G . PASS END=153923790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:27,0 chr1 153923791 . T . PASS END=153923791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153923792 . G . PASS END=153923792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153923793 . C . PASS END=153923796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153923797 . T . PASS END=153923797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:26,0 chr1 153923798 . G . PASS END=153923799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153923800 . G . PASS END=153923802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 153923803 . C . PASS END=153923804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 153923805 . T . PASS END=153923805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:27,0 chr1 153923806 . C . PASS END=153923807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153923808 . G . PASS END=153923808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 153923809 . G . PASS END=153923812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 153923813 . C . PASS END=153923813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 153923814 . G . PASS END=153923827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 153923828 . G . PASS END=153923839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,978:0,67,255:27,0 chr1 153923840 . G . PASS END=153923840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr1 153923841 . G . PASS END=153923856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:25,0 chr1 153923857 . C . PASS END=153923860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 153923861 . G . PASS END=153923866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 153923867 . G . PASS END=153923885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:17,0 chr1 153923886 . A . PASS END=153923886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 153923887 . G . PASS END=153923887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 153923888 . C . PASS END=153923888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 153923889 . A . PASS END=153923889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 153923890 . G . PASS END=153923894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 153923895 . A . PASS END=153923895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 153923896 . G . PASS END=153923905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 153923906 . C . PASS END=153923906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 153923907 . C . PASS END=153923909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 153923910 . A . PASS END=153923910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 153923911 . A . PASS END=153923917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 153923918 . A . PASS END=153923918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr1 153923919 . T . PASS END=153923923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 153923924 . T . PASS END=153923924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 153923925 . G . PASS END=153923925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 153923926 . G . PASS END=153923926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 153923927 . A . PASS END=153923930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 153923931 . G . PASS END=153923932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr1 153923933 . A . PASS END=153923933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 153923934 . G . PASS END=153923934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 153923935 . G . PASS END=153923936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:23,0 chr1 153923937 . A . PASS END=153923943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 153923944 . G . PASS END=153923944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:21,0 chr1 153923945 . A . PASS END=153923950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 153923951 . G . PASS END=153923951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,764:0,45,255:22,0 chr1 153923952 . A . PASS END=153923953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,880:0,64,255:25,0 chr1 153923954 . C . PASS END=153924010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1025:0,83,255:33,0 chr1 153924011 . A . PASS END=153924011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 153924012 . G . PASS END=153924018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 153924019 . G . PASS END=153924019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 153924020 . C . PASS END=153924024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153924025 . A . PASS END=153924025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 153924026 . G . PASS END=153924026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr1 153924027 . A . PASS END=153924040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,930:0,62,255:26,0 chr1 153924041 . G . PASS END=153924043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 153924044 . A . PASS END=153924080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,876:0,62,255:25,0 chr1 153924081 . C . PASS END=153924081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 153924082 . T . PASS END=153924082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:20,0 chr1 153924083 . G . PASS END=153924083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 153924084 . G . PASS END=153924087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 153924088 . T . PASS END=153924088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr1 153924089 . T . PASS END=153924096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 153924097 . C . PASS END=153924139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr1 153924140 . G . PASS END=153924140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:14,0 chr1 153924141 . T . PASS END=153924142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 153924494 . C . PASS END=153924495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 153924496 . G . PASS END=153924496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 153924497 . G . PASS END=153924498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 153924499 . G . PASS END=153924499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 153924500 . C . PASS END=153924512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,604:0,48,255:16,0 chr1 153924513 . G . PASS END=153924513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 153924514 . C . PASS END=153924529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 153924530 . T . PASS END=153924530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 153924531 . G . PASS END=153924538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:17,0 chr1 153924539 . C . PASS END=153924539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 153924540 . C . PASS END=153924540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 153924541 . A . PASS END=153924541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 153924542 . G . PASS END=153924546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 153924547 . G . PASS END=153924547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153924548 . T . PASS END=153924548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 153924549 . C . PASS END=153924549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153924550 . A . PASS END=153924550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 153924551 . T . PASS END=153924553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 153924554 . T . PASS END=153924554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 153924555 . G . PASS END=153924557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 153924558 . G . PASS END=153924558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 153924559 . G . PASS END=153924560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153924561 . C . PASS END=153924561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,723:0,38,255:21,0 chr1 153924562 . A . PASS END=153924563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153924564 . A . PASS END=153924564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,568:0,19,255:19,0 chr1 153924565 . T . PASS END=153924569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 153924570 . G . PASS END=153924570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:22,0 chr1 153924571 . G . PASS END=153924571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 153924572 . T . PASS END=153924572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 153924573 . A . PASS END=153924576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,758:0,72,255:25,0 chr1 153924577 . T . PASS END=153924577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 153924578 . T . PASS END=153924578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 153924579 . G . PASS END=153924579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr1 153924580 . C . PASS END=153924584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:26,0 chr1 153924585 . A . PASS END=153924585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,868:0,48,255:25,0 chr1 153924586 . C . PASS END=153924586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 153924587 . T . PASS END=153924587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 153924588 . C . PASS END=153924591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,850:0,64,255:26,0 chr1 153924592 . C . PASS END=153924592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,872:0,54,255:24,0 chr1 153924593 . T . PASS END=153924596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,919:0,70,255:26,0 chr1 153924597 . G . PASS END=153924597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:24,0 chr1 153924598 . T . PASS END=153924599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153924600 . G . PASS END=153924600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153924601 . G . PASS END=153924602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,970:0,70,255:26,0 chr1 153924603 . T . PASS END=153924603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 153924604 . G . PASS END=153924604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 153924605 . T . PASS END=153924607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,889:0,81,255:28,0 chr1 153924608 . C . PASS END=153924608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:26,0 chr1 153924609 . T . PASS END=153924609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 153924610 . T . PASS END=153924611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 153924612 . A . PASS END=153924612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,878:0,54,255:25,0 chr1 153924613 . G . PASS END=153924615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153924616 . T . PASS END=153924616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:26,0 chr1 153924617 . C . PASS END=153924618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153924619 . A . PASS END=153924619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,896:0,73,255:26,0 chr1 153924620 . G . PASS END=153924624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 153924625 . G . PASS END=153924625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 153924626 . T . PASS END=153924626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,897:0,53,255:26,0 chr1 153924627 . G . PASS END=153924629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153924630 . C . PASS END=153924630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 153924631 . A . PASS END=153924632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr1 153924633 . T . PASS END=153924633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 153924634 . G . PASS END=153924655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:29:0,83,975:0,83,255:31,0 chr1 153924656 . T . PASS END=153924657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr1 153924658 . A . PASS END=153924690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1127:0,83,255:32,0 chr1 153924691 . G . PASS END=153924691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153924692 . G . PASS END=153924692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 153924693 . T . PASS END=153924697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153924698 . G . PASS END=153924704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 153924705 . C . PASS END=153924713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr1 153924714 . A . PASS END=153924714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,916:0,37,255:22,0 chr1 153924715 . G . PASS END=153924720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr1 153924721 . T . PASS END=153924721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 153924722 . C . PASS END=153924723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 153924724 . G . PASS END=153924725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,62,255:18,0 chr1 153924726 . A . PASS END=153924726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:18,0 chr1 153924727 . G . PASS END=153924735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 153924736 . A . PASS END=153924738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 153924873 . T . PASS END=153924922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:49:0,103,1721:0,103,255:40,0 chr1 153925047 . C . PASS END=153925126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,178,255:40,0 chr1 153925281 . C . PASS END=153925310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:86:0,120,1800:0,223,255:40,0 chr1 153925356 . C . PASS END=153925374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:52:0,120,1800:0,152,255:40,0 chr1 153925742 . C . PASS END=153925752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:23,0 chr1 153925753 . C . PASS END=153925753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 153925754 . T . PASS END=153925780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:24,0 chr1 153925781 . C . PASS END=153925783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr1 153925784 . G . PASS END=153925784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 153925785 . G . PASS END=153925785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 153925786 . T . PASS END=153925787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,829:0,36,255:22,0 chr1 153925788 . G . PASS END=153925788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 153925789 . G . PASS END=153925790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:21,0 chr1 153925791 . A . PASS END=153925791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 153925792 . T . PASS END=153925793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 153925794 . C . PASS END=153925794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 153925795 . T . PASS END=153925796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 153925797 . G . PASS END=153925799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153925800 . A . PASS END=153925800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 153925801 . C . PASS END=153925801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153925802 . T . PASS END=153925804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 153925805 . G . PASS END=153925805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 153925806 . G . PASS END=153925806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr1 153925807 . T . PASS END=153925807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 153925808 . T . PASS END=153925808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 153925809 . C . PASS END=153925810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 153925811 . T . PASS END=153925811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 153925812 . C . PASS END=153925815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 153925816 . C . PASS END=153925818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 153925819 . G . PASS END=153925830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:19,0 chr1 153925831 . G . PASS END=153925838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 153925839 . G . PASS END=153925840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr1 153925841 . T . PASS END=153925842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 153925843 . G . PASS END=153925845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 153926014 . C . PASS END=153926040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:24,0 chr1 153926041 . A . PASS END=153926044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153926045 . G . PASS END=153926045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 153926046 . C . PASS END=153926049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 153926050 . T . PASS END=153926050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 153926051 . T . PASS END=153926057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 153926058 . A . PASS END=153926076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 153926077 . A . PASS END=153926077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 153926078 . T C, 49.89 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=1.021;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:8,4,0:2,5,0:48:85,0,50,322,358,679:255,0,255:6,0:4.9888e+01,6.6269e-05,5.3000e+01,3.2190e+02,3.9236e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,5,4:5,5,4,5 chr1 153926079 . C . PASS END=153926082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,40,255:13,0 chr1 153926731 . C . PASS END=153926792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,114,1710:0,129,255:40,0 chr1 153927349 . G . PASS END=153927372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:18,0 chr1 153927373 . G . PASS END=153927373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 153927374 . G . PASS END=153927374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 153927375 . A . PASS END=153927377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 153927378 . C . PASS END=153927385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 153927386 . C . PASS END=153927389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 153927390 . G . PASS END=153927390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 153927391 . A . PASS END=153927391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 153927392 . T . PASS END=153927394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 153927395 . C . PASS END=153927401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 153927402 . C . PASS END=153927403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,706:0,46,255:19,0 chr1 153927404 . C . PASS END=153927408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 153927409 . C . PASS END=153927409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 153927410 . A . PASS END=153927411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 153927412 . C . PASS END=153927412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 153927413 . A . PASS END=153927416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153927417 . C . PASS END=153927441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,613:0,51,255:19,0 chr1 153927442 . A . PASS END=153927442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 153927443 . T . PASS END=153927465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,605:0,40,255:19,0 chr1 153927541 . C . PASS END=153927544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1247:0,86,255:32,0 chr1 153927545 . A . PASS END=153927545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr1 153927546 . A . PASS END=153927553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1178:0,83,255:32,0 chr1 153927554 . A . PASS END=153927554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1156:0,68,255:30,0 chr1 153927555 . G . PASS END=153927619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1214:0,92,255:40,0 chr1 153927620 . A . PASS END=153927620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr1 153927621 . G . PASS END=153927642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:38:0,87,1236:0,87,255:39,0 chr1 153930537 . C . PASS END=153930540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153930541 . T . PASS END=153930559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:26,0 chr1 153930821 . C . PASS END=153930821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 153930822 . C . PASS END=153930822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 153930823 . G . PASS END=153930830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 153930831 . C . PASS END=153930831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr1 153930832 . C . PASS END=153930834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 153930835 . T . PASS END=153930835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 153930836 . G . PASS END=153930840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 153930841 . T . PASS END=153930854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:17,0 chr1 153930855 . A . PASS END=153930855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 153930856 . A . PASS END=153930875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,538:0,51,255:18,0 chr1 153930876 . T . PASS END=153930876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 153930877 . G . PASS END=153930892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,631:0,41,255:18,0 chr1 153930893 . C . PASS END=153930893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 153930894 . G . PASS END=153930897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 153930898 . T . PASS END=153930898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,482:0,21,255:15,0 chr1 153930899 . C . PASS END=153930904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 153930905 . A . PASS END=153930905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 153930906 . C . PASS END=153930908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 153930909 . A . PASS END=153930911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:15,0 chr1 153930912 . T . PASS END=153930916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,621:0,51,255:17,0 chr1 153930917 . C . PASS END=153930917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 153930918 . G . PASS END=153930924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 153930925 . A . PASS END=153930925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153930926 . A . PASS END=153930926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 153930927 . G . PASS END=153930936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:35:14:0,35,585:0,35,255:14,0 chr1 153930937 . T . PASS END=153930953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:9:0,27,349:0,27,255:9,0 chr1 153930954 . T . PASS END=153930964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 153930965 . C . PASS END=153930965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 153930966 . G . PASS END=153930969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,380:0,33,255:11,0 chr1 153930970 . C . PASS END=153930971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 153930972 . A . PASS END=153930973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 153932574 . C . PASS END=153932585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 153932586 . G . PASS END=153932586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 153932587 . A . PASS END=153932594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:9,0 chr1 153932595 . G . PASS END=153932631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 153932632 . A . PASS END=153932645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 153932646 . T . PASS END=153932652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153932653 . G . PASS END=153932660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 153932661 . C . PASS END=153932670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153932671 . G . PASS END=153932671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 153932672 . G . PASS END=153932687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 153932688 . G . PASS END=153932717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 153932718 . G . PASS END=153932730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 153932731 . G . PASS END=153932731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 153932732 . A . PASS END=153932736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 153932737 . G . PASS END=153932737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 153932738 . C . PASS END=153932739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 153932740 . A . PASS END=153932742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:11,0 chr1 153932743 . T . PASS END=153932752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 153932753 . G . PASS END=153932759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 153932760 . C . PASS END=153932765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 153932766 . T . PASS END=153932795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,599:0,48,255:19,0 chr1 153932796 . A . PASS END=153932796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:17,0 chr1 153932797 . G . PASS END=153932797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 153932798 . G . PASS END=153932798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:18,0 chr1 153932799 . T . PASS END=153932829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,653:0,44,255:19,0 chr1 153932830 . G . PASS END=153932839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 153932840 . G . PASS END=153932840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 153932841 . T . PASS END=153932870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 153932871 . G . PASS END=153932871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 153932872 . G . PASS END=153932892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 153932893 . C . PASS END=153932904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 153932905 . A . PASS END=153932907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153932908 . A . PASS END=153932955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 153932956 . A . PASS END=153932956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153932957 . C . PASS END=153932960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153932961 . C . PASS END=153932980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 153932981 . G . PASS END=153932994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 153932995 . A . PASS END=153932996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1007:0,73,255:26,0 chr1 153932997 . C . PASS END=153933048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1194:0,92,255:34,0 chr1 153933049 . T . PASS END=153933049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1124:0,44,255:27,0 chr1 153933050 . G . PASS END=153933120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:36,0 chr1 153933121 . T . PASS END=153933121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 153933122 . C . PASS END=153933153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,102,255:37,0 chr1 153933154 . G . PASS END=153933165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:34:0,69,1035:0,86,255:26,0 chr1 153933166 . T . PASS END=153933172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 153933173 . T . PASS END=153933173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 153933174 . C . PASS END=153933178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 153933179 . G . PASS END=153933200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,833:0,61,255:26,0 chr1 153933201 . C . PASS END=153933207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 153933208 . A . PASS END=153933208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:18,0 chr1 153933209 . A . PASS END=153933230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 153934696 . C . PASS END=153934708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,833:0,72,255:26,0 chr1 153934709 . G . PASS END=153934712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 153934713 . C . PASS END=153934713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:26,0 chr1 153934714 . C . PASS END=153934718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:30,0 chr1 153934719 . C . PASS END=153934719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,883:0,73,255:29,0 chr1 153934720 . C . PASS END=153934725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1217:0,86,255:33,0 chr1 153934726 . T . PASS END=153934726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 153934727 . A . PASS END=153934796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1166:0,85,255:35,0 chr1 153934797 . T . PASS END=153934797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr1 153934798 . T . PASS END=153934805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:35,0 chr1 153934806 . T . PASS END=153934806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:29,0 chr1 153934807 . C . PASS END=153934823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1103:0,86,255:30,0 chr1 153934824 . A . PASS END=153934824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 153934825 . A . PASS END=153934826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153935005 . C . PASS END=153935018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr1 153935019 . T . PASS END=153935019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 153935020 . T . PASS END=153935037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,627:0,51,255:18,0 chr1 153935038 . G . PASS END=153935095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 153935096 . C . PASS END=153935101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 153935102 . C . PASS END=153935116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 153935117 . C . PASS END=153935174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,513:0,45,255:19,0 chr1 153935175 . T . PASS END=153935183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:15:0,30,450:0,31,255:13,0 chr1 153935184 . G . PASS END=153935191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,31,255:8,0 chr1 153936129 . T . PASS END=153936179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr1 153941002 . A . PASS END=153941007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153941008 . C . PASS END=153941023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:24,0 chr1 153941024 . T . PASS END=153941024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 153941025 . G . PASS END=153941034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,986:0,75,255:26,0 chr1 153941035 . T . PASS END=153941041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 153941042 . A . PASS END=153941051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 153941052 . G . PASS END=153941052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 153941053 . G . PASS END=153941057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 153941058 . C . PASS END=153941060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 153941061 . C . PASS END=153941068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 153941069 . G . PASS END=153941072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153941073 . C . PASS END=153941073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 153941074 . G . PASS END=153941076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 153941077 . C . PASS END=153941077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 153941078 . T . PASS END=153941082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153941083 . C . PASS END=153941084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 153941085 . G . PASS END=153941104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1088:0,87,255:30,0 chr1 153941105 . C . PASS END=153941120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 153941121 . T . PASS END=153941121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 153941122 . A . PASS END=153941147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 153941148 . C . PASS END=153941148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 153941149 . T . PASS END=153941149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153941150 . G . PASS END=153941150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 153941151 . G . PASS END=153941154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 153941155 . T . PASS END=153941155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:16,0 chr1 153941156 . C . PASS END=153941171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,651:0,41,255:17,0 chr1 153941172 . C . PASS END=153941175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:17:0,38,585:0,38,255:13,0 chr1 153941406 . G . PASS END=153941409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:31,0 chr1 153941410 . T . PASS END=153941410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr1 153941411 . T . PASS END=153941476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1124:0,80,255:37,0 chr1 153941477 . A . PASS END=153941502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1272:0,92,255:38,0 chr1 153941503 . T . PASS END=153941503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:31,0 chr1 153941504 . C . PASS END=153941513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1205:0,91,255:33,0 chr1 153941514 . C T, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=3.383;FractionInformativeReads=0.972;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,18,0:0.514,0.000:35:4,11,0:13,7,0:48:85,0,50,620,595,1215:255,0,255:14,0:5.0000e+01,6.5492e-05,5.2936e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,8,10:10,7,9,9 chr1 153941515 . C . PASS END=153941517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 153941518 . G . PASS END=153941549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:24:0,61,945:0,61,255:26,0 chr1 153941550 . A . PASS END=153941551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 153941552 . C . PASS END=153941556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 153941557 . C . PASS END=153941560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153941561 . T . PASS END=153941623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,621:0,47,255:19,0 chr1 153941624 . A . PASS END=153941625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153941626 . A . PASS END=153941652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr1 153941810 . A . PASS END=153941816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 153941817 . G . PASS END=153941831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 153941832 . G . PASS END=153941832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 153941833 . G . PASS END=153941845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1117:0,90,255:30,0 chr1 153941846 . G . PASS END=153941846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 153941847 . C . PASS END=153941853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 153941854 . A . PASS END=153941854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 153941855 . G . PASS END=153941859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 153941860 . C . PASS END=153941881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 153941882 . A . PASS END=153941883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,829:0,56,255:19,0 chr1 153941884 . A . PASS END=153941884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 153941885 . T . PASS END=153941885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr1 153941886 . C . PASS END=153941896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 153941897 . C . PASS END=153941913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 153941914 . G . PASS END=153941915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 153941916 . G . PASS END=153941916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 153941917 . C . PASS END=153941925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,31,255:11,0 chr1 153941926 . A . PASS END=153941934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,28,255:9,0 chr1 153945220 . C . PASS END=153945330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1350:0,85,255:40,0 chr1 153945448 . G . PASS END=153945508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1066:0,82,255:33,0 chr1 153945509 . A . PASS END=153945509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:28,0 chr1 153945510 . C . PASS END=153945518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 153945519 . G . PASS END=153945519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr1 153945520 . C . PASS END=153945522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1162:0,93,255:31,0 chr1 153945523 . A . PASS END=153945523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 153945524 . A . PASS END=153945544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1170:0,90,255:31,0 chr1 153945545 . T . PASS END=153945545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 153945546 . G . PASS END=153945550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 153945551 . G . PASS END=153945556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:24,0 chr1 153945671 . G . PASS END=153945739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,101,1464:0,101,255:40,0 chr1 153945856 . C . PASS END=153945940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:49:0,120,1800:0,147,255:40,0 chr1 153946096 . A . PASS END=153946101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,962:0,65,255:26,0 chr1 153946102 . C . PASS END=153946103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,880:0,42,255:27,2 chr1 153946104 . T . PASS END=153946112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr1 153946113 . G . PASS END=153946114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 153946115 . C . PASS END=153946126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 153946127 . T . PASS END=153946127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 153946128 . G . PASS END=153946128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153946129 . C . PASS END=153946129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 153946130 . C . PASS END=153946131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153946132 . A . PASS END=153946134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1078:0,74,255:26,0 chr1 153946135 . T . PASS END=153946137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153946138 . A . PASS END=153946138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 153946139 . G . PASS END=153946141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 153946142 . C . PASS END=153946158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,990:0,68,255:25,0 chr1 153946159 . G . PASS END=153946159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,809:0,39,255:21,0 chr1 153946160 . A . PASS END=153946164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,884:0,61,255:22,0 chr1 153946165 . G . PASS END=153946174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 153946175 . A . PASS END=153946175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 153946176 . T . PASS END=153946176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 153946177 . T . PASS END=153946178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153946179 . C . PASS END=153946179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:20,0 chr1 153946180 . C . PASS END=153946182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153946183 . C . PASS END=153946183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 153946184 . C . PASS END=153946187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 153946188 . C . PASS END=153946192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 153946348 . T . PASS END=153946485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:36:0,92,1264:0,92,255:40,0 chr1 153946486 . G . PASS END=153946486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1313:0,60,255:32,0 chr1 153946487 . G . PASS END=153946509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,98,255:35,0 chr1 153946510 . T . PASS END=153946530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:23,0 chr1 153946531 . A . PASS END=153946531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:17,0 chr1 153946532 . T . PASS END=153946533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 153946534 . A . PASS END=153946535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 153946536 . A . PASS END=153946536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 153946537 . T . PASS END=153946538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,634:0,60,255:20,0 chr1 153946539 . T . PASS END=153946541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr1 153947155 . C . PASS END=153947190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1033:0,84,255:33,0 chr1 153947191 . A . PASS END=153947191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:32,0 chr1 153947192 . G . PASS END=153947263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1227:0,86,255:35,0 chr1 153947264 . C . PASS END=153947265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1180:0,60,255:32,0 chr1 153947266 . T . PASS END=153947279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1135:0,96,255:32,0 chr1 153947280 . A . PASS END=153947284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 153947285 . C . PASS END=153947289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 153947290 . T . PASS END=153947311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1055:0,74,255:26,0 chr1 153948302 . C . PASS END=153948381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:97:35:0,97,1303:0,97,255:40,0 chr1 153949169 . A . PASS END=153949172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,128,255:40,0 chr1 153949173 . C . PASS END=153949285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:52:0,120,1800:0,120,255:40,0 chr1 153949452 . C . PASS END=153949489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:43:0,91,1551:0,91,255:40,0 chr1 153949646 . C . PASS END=153949681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:34:0,80,1318:0,80,255:37,0 chr1 153949682 . A . PASS END=153949682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 153949683 . G . PASS END=153949728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1194:0,83,255:36,0 chr1 153954575 . T . PASS END=153954636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:32:0,93,1233:0,96,255:40,0 chr1 153954637 . G . PASS END=153954652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1107:0,80,255:32,0 chr1 153954867 . T . PASS END=153954920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,99,1485:0,110,255:40,0 chr1 153955011 . C . PASS END=153955012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153955013 . C . PASS END=153955013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 153955014 . A . PASS END=153955020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 153955021 . T . PASS END=153955021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,709:0,30,255:20,0 chr1 153955022 . T . PASS END=153955076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,840:0,61,255:26,0 chr1 153955195 . C . PASS END=153955195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 153955196 . T . PASS END=153955200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 153955201 . G . PASS END=153955207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 153955208 . T . PASS END=153955209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 153955210 . C . PASS END=153955223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr1 153955224 . T . PASS END=153955224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:27,0 chr1 153955225 . C . PASS END=153955225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 153955226 . T . PASS END=153955236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:30,0 chr1 153955237 . G . PASS END=153955237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 153955238 . T . PASS END=153955266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1102:0,87,255:31,0 chr1 153955267 . C . PASS END=153955284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,967:0,65,255:26,0 chr1 153955695 . C . PASS END=153955772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:48:0,116,1719:0,116,255:40,0 chr1 153955997 . C . PASS END=153956057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:91:47:0,91,1507:0,91,255:40,0 chr1 153957197 . C . PASS END=153957257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,111,1714:0,111,255:40,0 chr1 153958589 . C . PASS END=153958600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:25,0 chr1 153958601 . T . PASS END=153958601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 153958602 . G . PASS END=153958613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 153958614 . G . PASS END=153958614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 153958615 . A . PASS END=153958616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 153958617 . G . PASS END=153958619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 153958620 . G . PASS END=153958620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 153958621 . T . PASS END=153958621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 153958622 . C . PASS END=153958622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 153958623 . C . PASS END=153958625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1084:0,87,255:29,0 chr1 153958626 . T . PASS END=153958640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 153958641 . C . PASS END=153958681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:31,0 chr1 153958682 . A . PASS END=153958682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 153958683 . C . PASS END=153958685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 153958686 . G . PASS END=153958699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1008:0,68,255:26,0 chr1 153958700 . A . PASS END=153958700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 153958701 . G . PASS END=153958712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 153963273 . A . PASS END=153963278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr1 153963390 . G . PASS END=153963505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1164:0,83,255:40,0 chr1 153963506 . C . PASS END=153963506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 153963507 . C . PASS END=153963507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 153963508 . C . PASS END=153963510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,87,255:24,0 chr1 153963591 . C . PASS END=153963592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 153963593 . C . PASS END=153963599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 153963600 . G . PASS END=153963600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 153963601 . A . PASS END=153963601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 153963602 . T . PASS END=153963602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 153963603 . C . PASS END=153963678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1072:0,81,255:38,0 chr1 153963679 . T . PASS END=153963679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 153963680 . C . PASS END=153963694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1109:0,80,255:30,0 chr1 153963695 . C . PASS END=153963695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 153963696 . C . PASS END=153963696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153963697 . C . PASS END=153963699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 153964042 . G . PASS END=153964043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 153964044 . T . PASS END=153964079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr1 153964080 . A . PASS END=153964080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,516:0,51,255:21,0 chr1 153964081 . C . PASS END=153964087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 153964088 . T . PASS END=153964088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 153964089 . T . PASS END=153964097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:23,0 chr1 153964098 . G . PASS END=153964101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,820:0,53,255:19,0 chr1 153964102 . G . PASS END=153964104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 153964105 . C . PASS END=153964105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 153964106 . C . PASS END=153964116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 153964117 . G . PASS END=153964117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 153964118 . C . PASS END=153964118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 153964119 . C . PASS END=153964140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,50,255:18,0 chr1 153964141 . G . PASS END=153964142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 153964143 . C . PASS END=153964143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 153964144 . T . PASS END=153964144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:13,0 chr1 153964145 . T . PASS END=153964149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 153964150 . A . PASS END=153964152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr1 153964541 . G . PASS END=153964541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153964542 . A . PASS END=153964544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 153964545 . T . PASS END=153964546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153964547 . C . PASS END=153964547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 153964548 . C . PASS END=153964548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153964549 . T . PASS END=153964549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 153964550 . T . PASS END=153964550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 153964551 . C . PASS END=153964551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 153964552 . A . PASS END=153964552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153964553 . G . PASS END=153964553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 153964554 . G . PASS END=153964554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153964555 . A . PASS END=153964555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 153964556 . G . PASS END=153964556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:29,0 chr1 153964557 . G . PASS END=153964557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153964558 . A . PASS END=153964558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 153964559 . A . PASS END=153964559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 153964560 . G . PASS END=153964566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:27,0 chr1 153964567 . T . PASS END=153964567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr1 153964568 . A . PASS END=153964569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 153965311 . T . PASS END=153965315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,605:0,51,255:17,0 chr1 153965316 . G . PASS END=153965321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 153965322 . T . PASS END=153965322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 153965323 . A . PASS END=153965334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,978:0,69,255:26,0 chr1 153965335 . A . PASS END=153965340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:27,0 chr1 153965341 . C . PASS END=153965357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr1 153965358 . A . PASS END=153965358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,945:0,50,255:24,0 chr1 153965359 . T . PASS END=153965371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 153965372 . C . PASS END=153965377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 153965378 . A . PASS END=153965378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 153965379 . A . PASS END=153965401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1019:0,84,255:30,0 chr1 153965402 . T . PASS END=153965402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:28,0 chr1 153965403 . T . PASS END=153965411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr1 153965491 . C . PASS END=153965565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1260:0,92,255:40,0 chr1 153967552 . C . PASS END=153967651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1169:0,86,255:40,0 chr1 153967652 . G . PASS END=153967656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,105,255:25,0 chr1 153973332 . C . PASS END=153973506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1189:0,81,255:40,0 chr1 153973507 . G . PASS END=153973518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,77,255:24,0 chr1 153973519 . T . PASS END=153973519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 153973520 . G . PASS END=153973522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 153973523 . G . PASS END=153973536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 153974211 . C . PASS END=153974219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 153974220 . C . PASS END=153974220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 153974221 . C . PASS END=153974226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,615:0,43,255:19,0 chr1 153974227 . A . PASS END=153974240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:26,0 chr1 153974241 . C . PASS END=153974356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1007:0,81,255:40,0 chr1 153974357 . C . PASS END=153974357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:32,0 chr1 153974358 . A . PASS END=153974402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1208:0,83,255:35,0 chr1 153974403 . G . PASS END=153974403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 153974404 . A . PASS END=153974404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 153974405 . G . PASS END=153974416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:26,0 chr1 153974417 . G . PASS END=153974417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 153974418 . C . PASS END=153974422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:20,0 chr1 153974423 . C . PASS END=153974447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,53,255:19,0 chr1 153974448 . G . PASS END=153974461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,540:0,32,255:13,0 chr1 153982448 . C . PASS END=153982596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:36:0,90,1291:0,91,255:40,0 chr1 153982597 . C . PASS END=153982597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:29,0 chr1 153984720 . C . PASS END=153984846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,99,1438:0,99,255:40,0 chr1 153991409 . C . PASS END=153991409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 153991410 . T . PASS END=153991508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1202:0,93,255:40,0 chr1 153991509 . A . PASS END=153991530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 153991531 . A . PASS END=153991545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,698:0,57,255:19,0 chr1 153994602 . C . PASS END=153994605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1344:0,111,255:37,0 chr1 153994606 . C . PASS END=153994606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1160:0,55,255:35,0 chr1 153994607 . T . PASS END=153994609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1404:0,111,255:37,0 chr1 153994610 . C . PASS END=153994646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:94:37:0,94,1340:0,94,255:40,0 chr1 153994647 . C T, 49.62 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=2.992;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:11,9,0:13,12,0:48:84,0,50,743,842,1585:255,0,255:21,0:4.9623e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,11,10:10,14,9,12 chr1 153994648 . A . PASS END=153994684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:42:0,97,1461:0,97,255:40,0 chr1 153994685 . A . PASS END=153994812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:30:0,81,1215:0,90,255:40,0 chr1 153994813 . G . PASS END=153994813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:25,0 chr1 153994814 . T . PASS END=153994816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 153994817 . T . PASS END=153994817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,809:0,36,255:25,0 chr1 153994818 . C . PASS END=153994819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 153995598 . C . PASS END=153995606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:25,0 chr1 153995607 . G . PASS END=153995607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 153995608 . C . PASS END=153995613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:30,0 chr1 153995614 . A . PASS END=153995614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:28,0 chr1 153995615 . A . PASS END=153995685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1042:0,83,255:35,0 chr1 153995686 . T . PASS END=153995686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr1 153995687 . G . PASS END=153995729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1172:0,85,255:36,0 chr1 153995730 . A . PASS END=153995739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1072:0,74,255:26,0 chr1 153995740 . G . PASS END=153995746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 153995747 . C . PASS END=153995751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:21,0 chr1 153995752 . G . PASS END=153995769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:17:0,42,630:0,47,255:19,0 chr1 153995770 . C . PASS END=153995773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 153998018 . C . PASS END=153998025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr1 153998026 . C . PASS END=153998046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:24,0 chr1 153998047 . C . PASS END=153998062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1017:0,81,255:31,0 chr1 153998063 . A . PASS END=153998063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 153998064 . G . PASS END=153998067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1066:0,93,255:31,0 chr1 153998068 . T . PASS END=153998068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 153998069 . G . PASS END=153998143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1133:0,83,255:36,0 chr1 153998144 . A . PASS END=153998144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:29,0 chr1 153998145 . T . PASS END=153998150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr1 153998151 . A . PASS END=153998153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 153998154 . C . PASS END=153998157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 153998158 . T . PASS END=153998160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 153998161 . G . PASS END=153998162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 153998163 . A . PASS END=153998170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 153998171 . A . PASS END=153998175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 153998176 . C . PASS END=153998176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 153998177 . G . PASS END=153998188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:19,0 chr1 153998189 . T . PASS END=153998192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,470:0,34,255:13,0 chr1 153999982 . C . PASS END=154000073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1233:0,87,255:40,0 chr1 154002372 . C . PASS END=154002400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:24,0 chr1 154002401 . A . PASS END=154002401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 154002402 . C . PASS END=154002418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,765:0,69,255:25,0 chr1 154002419 . G . PASS END=154002419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 154002420 . C . PASS END=154002420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 154002421 . C . PASS END=154002421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 154002422 . C . PASS END=154002422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 154002423 . A . PASS END=154002423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr1 154002424 . G . PASS END=154002425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 154002426 . G . PASS END=154002430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 154002431 . T . PASS END=154002446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:25,0 chr1 154002447 . A . PASS END=154002447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,792:0,28,255:21,0 chr1 154002448 . G . PASS END=154002455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 154002456 . G . PASS END=154002485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,551:0,45,255:19,0 chr1 154002486 . G . PASS END=154002486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 154002487 . A . PASS END=154002492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154002493 . A . PASS END=154002493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 154002494 . T . PASS END=154002494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154002495 . G . PASS END=154002500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 154002501 . G . PASS END=154002502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 154002503 . T . PASS END=154002505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 154002506 . G . PASS END=154002506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 154002507 . C . PASS END=154002507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 154002508 . T . PASS END=154002508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 154002509 . C . PASS END=154002509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 154002510 . T . PASS END=154002510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 154002511 . A . PASS END=154002511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 154002512 . C . PASS END=154002512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 154002513 . T . PASS END=154002513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 154002514 . G . PASS END=154002514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 154002515 . G . PASS END=154002518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 154002519 . C . PASS END=154002519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 154002520 . T . PASS END=154002530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 154018545 . C . PASS END=154018545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:20,0 chr1 154018546 . T . PASS END=154018566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,853:0,62,255:26,0 chr1 154018567 . T . PASS END=154018567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154018568 . C . PASS END=154018568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 154018569 . C . PASS END=154018580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:31,0 chr1 154018581 . T . PASS END=154018581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr1 154018582 . T . PASS END=154018589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1186:0,93,255:31,0 chr1 154018590 . A . PASS END=154018590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 154018591 . G . PASS END=154018613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:36,0 chr1 154018614 . A . PASS END=154018614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:35,0 chr1 154018615 . T . PASS END=154018644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:36:0,98,1307:0,98,255:38,0 chr1 154018645 . G . PASS END=154018645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1345:0,78,255:35,0 chr1 154018646 . T . PASS END=154018663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:37:0,93,1395:0,111,255:36,0 chr1 154018664 . C . PASS END=154018664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:35,0 chr1 154018665 . A . PASS END=154018676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:38:0,80,1092:0,80,255:38,0 chr1 154018765 . C . PASS END=154018845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,111,1720:0,111,255:40,0 chr1 154026704 . C . PASS END=154026883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1215:0,90,255:40,0 chr1 154027246 . C . PASS END=154027308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,172,255:40,0 chr1 154029291 . T . PASS END=154029412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:37:0,80,1230:0,80,255:40,0 chr1 154029413 . G . PASS END=154029423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,108,1620:0,128,255:40,0 chr1 154030565 . G . PASS END=154030692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:41:0,93,1373:0,93,255:40,0 chr1 154031041 . C . PASS END=154031169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:34:0,89,1296:0,89,255:40,0 chr1 154033016 . C . PASS END=154033117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,111,1665:0,118,255:40,0 chr1 154033418 . C . PASS END=154033522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:43:0,96,1439:0,96,255:40,0 chr1 154034062 . T . PASS END=154034150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:42:0,91,1394:0,91,255:40,0 chr1 154042749 . C . PASS END=154042919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:80:32:0,80,1131:0,80,255:40,1 chr1 154042920 . C . PASS END=154042921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1278:0,70,255:29,1 chr1 154042922 . C . PASS END=154042923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:27,0 chr1 154042924 . C . PASS END=154042931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,80,255:26,0 chr1 154042932 . A . PASS END=154042941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:21:0,51,765:0,53,255:19,0 chr1 154061897 . C . PASS END=154061903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154061904 . T . PASS END=154061921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:24,0 chr1 154061922 . G . PASS END=154061997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1047:0,84,255:39,0 chr1 154061998 . G . PASS END=154061998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 154061999 . A . PASS END=154062050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1147:0,80,255:40,0 chr1 154062051 . C . PASS END=154062051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 154062052 . C . PASS END=154062064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 154062065 . G . PASS END=154062065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:26,0 chr1 154062066 . A . PASS END=154062067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154062068 . A . PASS END=154062070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 154067411 . T . PASS END=154067411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 154067412 . T . PASS END=154067413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 154067414 . T . PASS END=154067415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1022:0,68,255:26,0 chr1 154067416 . C . PASS END=154067564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1111:0,81,255:40,0 chr1 154067565 . C . PASS END=154067567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 154067568 . C . PASS END=154067569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154067570 . T . PASS END=154067570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr1 154067571 . T . PASS END=154067574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154067575 . A . PASS END=154067588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr1 154067589 . A . PASS END=154067589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:19,0 chr1 154067590 . C . PASS END=154067591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 154067592 . G . PASS END=154067592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:16,0 chr1 154067593 . A . PASS END=154067593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:16,0 chr1 154067594 . C . PASS END=154067597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:16,0 chr1 154067598 . C . PASS END=154067607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:15:0,33,495:0,45,255:13,0 chr1 154067608 . A . PASS END=154067608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 154067609 . T . PASS END=154067632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 154072474 . C . PASS END=154072485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:97:37:0,97,1299:0,97,255:39,0 chr1 154072486 . A . PASS END=154072486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:38,0 chr1 154072487 . T . PASS END=154072588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,101,1427:0,101,255:40,0 chr1 154072589 . G . PASS END=154072589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:32,0 chr1 154072590 . A . PASS END=154072599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:34:0,87,1305:0,95,255:33,0 chr1 154072600 . T . PASS END=154072619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:26:0,66,990:0,72,255:25,0 chr1 154076488 . C . PASS END=154076496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1150:0,92,255:35,0 chr1 154076497 . G . PASS END=154076497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:31,0 chr1 154076498 . A . PASS END=154076498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 154076499 . A . PASS END=154076499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 154076500 . G . PASS END=154076686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:42:0,93,1395:0,93,255:40,0 chr1 154090201 . C . PASS END=154090201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 154090202 . T . LowGQ END=154090202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,6:21:0:21:0,0,377:37,0,255:15,0 chr1 154090203 . T . PASS END=154090203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,0 chr1 154090204 . A . PASS END=154090204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,639:0,35,255:21,0 chr1 154090205 . A . PASS END=154090205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 154090206 . T . PASS END=154090206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,607:0,19,255:20,0 chr1 154090207 . T . PASS END=154090207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,869:0,75,255:25,0 chr1 154090208 . T . PASS END=154090208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:24,0 chr1 154090209 . C . LowGQ END=154090209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,5:26:0:26:0,0,665:27,0,255:21,0 chr1 154090210 . T . PASS END=154090210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,862:0,61,255:25,0 chr1 154090211 . C . PASS END=154090211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,697:0,44,255:24,0 chr1 154090212 . C . PASS END=154090213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,854:0,61,255:26,0 chr1 154090214 . T . PASS END=154090214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,737:0,28,255:23,0 chr1 154090215 . A . PASS END=154090215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,887:0,78,255:26,0 chr1 154090216 . T . PASS END=154090216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:25,0 chr1 154090217 . C . PASS END=154090217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,776:0,9,255:24,0 chr1 154090218 . G . PASS END=154090218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 154090219 . A . PASS END=154090219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,764:0,47,255:25,0 chr1 154090220 . A . PASS END=154090221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 154090222 . G . PASS END=154090222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,737:0,15,255:23,0 chr1 154090223 . G . PASS END=154090223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 154090224 . G . PASS END=154090224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154090225 . A . PASS END=154090225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,870:0,26,255:26,0 chr1 154090226 . T . PASS END=154090226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154090227 . T . PASS END=154090227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:29,0 chr1 154090228 . T . PASS END=154090229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 154090230 . G . PASS END=154090230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:13:32:0,13,942:0,13,255:27,0 chr1 154090231 . T . PASS END=154090231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 154090232 . A . PASS END=154090232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1104:0,65,255:30,0 chr1 154090233 . C . PASS END=154090233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1025:0,41,255:30,0 chr1 154090234 . A . PASS END=154090246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1073:0,80,255:39,0 chr1 154090247 . A . PASS END=154090247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1295:0,62,255:37,0 chr1 154090248 . C . PASS END=154090308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:39:0,87,1301:0,87,255:40,0 chr1 154090309 . T . PASS END=154090309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1355:0,71,255:34,0 chr1 154090310 . G . PASS END=154090313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1419:0,104,255:36,0 chr1 154090314 . C . PASS END=154090314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:35,0 chr1 154090315 . A . PASS END=154090344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1186:0,83,255:37,0 chr1 154090345 . G . PASS END=154090348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,945:0,89,255:21,0 chr1 154090349 . C . PASS END=154090352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:31:0,57,855:0,93,255:19,0 chr1 154090353 . C . PASS END=154090356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 154091147 . C . PASS END=154091284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:63:0,120,1800:0,165,255:40,0 chr1 154098799 . C . PASS END=154098939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:44:0,119,1665:0,119,255:40,0 chr1 154099787 . A . PASS END=154099890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:35:0,86,1296:0,86,255:40,0 chr1 154099891 . A . PASS END=154099893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr1 154101753 . C . PASS END=154101821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,127,255:40,0 chr1 154108290 . T . PASS END=154108349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:32:0,96,1181:0,96,255:40,0 chr1 154108350 . T . PASS END=154108386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,117,1648:0,117,255:40,0 chr1 154108387 . G A, 194.01 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,21,0:0,28,0:144:232,147,0,332,332,332:255,147,0:0,0:1.9401e+02,1.4401e+02,0.0000e+00,3.2878e+02,3.6355e+02,3.3179e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,35:0,0,24,25 chr1 154108388 . T . PASS END=154108424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1395:0,103,255:40,0 chr1 154108425 . A . PASS END=154108426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,117,255:29,0 chr1 154108427 . T . PASS END=154108427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:28,0 chr1 154108428 . G . PASS END=154108445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1135:0,93,255:32,0 chr1 154108446 . C . PASS END=154108448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:25,0 chr1 154110582 . C . PASS END=154110688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,117,1800:0,117,255:40,1 chr1 154110689 . A . PASS END=154110710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:87:46:0,87,1305:0,122,255:40,0 chr1 154110711 . C . PASS END=154110714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:72:46:0,72,1080:0,105,255:26,0 chr1 154112278 . C . PASS END=154112428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:47:0,120,1800:0,123,255:40,0 chr1 154113907 . C . PASS END=154114000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,117,1755:0,130,255:40,0 chr1 154115922 . C . PASS END=154116051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:32:0,81,1215:0,88,255:40,0 chr1 154116052 . C . PASS END=154116053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,80,255:23,0 chr1 154125212 . C . PASS END=154125212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 154125213 . T . PASS END=154125214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 154125215 . T . PASS END=154125216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 154125217 . T . PASS END=154125217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:27,0 chr1 154125218 . C . PASS END=154125348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:29:0,81,1086:0,87,255:40,0 chr1 154127318 . C . PASS END=154127320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,870:0,69,255:24,0 chr1 154127321 . G . PASS END=154127326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr1 154127327 . C . PASS END=154127327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 154127328 . A . PASS END=154127347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 154127348 . A . PASS END=154127348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 154127349 . G . PASS END=154127380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,973:0,84,255:32,0 chr1 154127381 . G . PASS END=154127383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr1 154127384 . A . PASS END=154127450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1159:0,83,255:36,0 chr1 154127451 . G . PASS END=154127476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:26:0,66,990:0,74,255:27,0 chr1 154127477 . A . PASS END=154127477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 154127478 . G . PASS END=154127493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 154127494 . T . PASS END=154127494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,736:0,52,255:20,0 chr1 154127495 . C . PASS END=154127499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154127500 . T . PASS END=154127507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154127508 . G . PASS END=154127509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 154127510 . C . PASS END=154127510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:18,0 chr1 154127511 . A . PASS END=154127511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:17,0 chr1 154127512 . G . PASS END=154127520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:17,0 chr1 154130115 . C . PASS END=154130189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:31:0,86,1119:0,86,255:38,0 chr1 154130190 . C . PASS END=154130190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 154130191 . A . PASS END=154130197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,976:0,93,255:31,0 chr1 154131445 . T . PASS END=154131478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1225:0,86,255:35,0 chr1 154131479 . T . PASS END=154131479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1234:0,77,255:34,0 chr1 154131480 . C . PASS END=154131524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1227:0,91,255:36,0 chr1 154134316 . C . PASS END=154134316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 154134487 . A . PASS END=154134487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 154134512 . C . PASS END=154134512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 154134543 . T . PASS END=154134543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1710:0,144,255:38,0 chr1 154134548 . T . PASS END=154134548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 154134913 . G . PASS END=154134913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:85:0,120,1800:0,222,255:40,0 chr1 154134973 . T . PASS END=154134973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr1 154134976 . C . PASS END=154134976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr1 154135007 . T . PASS END=154135007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 154135147 . A . PASS END=154135147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 154135174 . G . PASS END=154135174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 154135209 . G . PASS END=154135209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 154135607 . T . PASS END=154135607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1323:0,120,255:40,0 chr1 154135777 . C . PASS END=154135777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 154135834 . C . PASS END=154135834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 154135872 . A . PASS END=154135872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 154135888 . C . PASS END=154135888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 154135900 . C . PASS END=154135900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr1 154135970 . C . PASS END=154135970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 154135990 . C . PASS END=154135990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 154136024 . C . PASS END=154136024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 154136541 . A . PASS END=154136541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154136553 . G . PASS END=154136553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 154136594 . C . PASS END=154136594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 154136606 . C . PASS END=154136606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154136656 . T . PASS END=154136656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 154136657 . G . PASS END=154136657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 154137115 . T . PASS END=154137115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,246,255:40,0 chr1 154137398 . C . PASS END=154137398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 154138261 . G . PASS END=154138261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,114,1710:0,138,255:37,0 chr1 154138282 . A . PASS END=154138282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 154138297 . A . PASS END=154138297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,179,255:40,0 chr1 154138312 . A . PASS END=154138312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 154138360 . C . PASS END=154138360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 154138378 . G . PASS END=154138378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr1 154138398 . A . PASS END=154138398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:81:0,120,1800:0,227,255:40,0 chr1 154138446 . G . PASS END=154138446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 154138449 . T . PASS END=154138449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 154138752 . G . PASS END=154138752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 154138761 . C . PASS END=154138761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 154138892 . C . PASS END=154138892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 154138966 . C . PASS END=154138966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 154139016 . T . PASS END=154139016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 154139054 . C . PASS END=154139054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154139757 . G . PASS END=154139757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 154139914 . G . PASS END=154139914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 154139924 . A . PASS END=154139924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 154139931 . G . PASS END=154139931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 154140007 . A . PASS END=154140007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 154140088 . C . PASS END=154140088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154140101 . T . PASS END=154140101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 154140110 . T . PASS END=154140110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154140130 . C . PASS END=154140130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 154140159 . C . PASS END=154140159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154140256 . G . PASS END=154140256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 154140325 . C . PASS END=154140325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 154140352 . G . PASS END=154140352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 154140367 . G . PASS END=154140367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 154140372 . G . PASS END=154140372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 154140381 . G . PASS END=154140381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 154140413 . T . PASS END=154140417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 154141781 . A . PASS END=154141859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:48:0,120,1800:0,140,255:40,0 chr1 154141873 . G . PASS END=154141873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 154142453 . C . PASS END=154142453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 154142876 . C . PASS END=154142946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,174,255:40,0 chr1 154142948 . G . PASS END=154142948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 154142952 . G . PASS END=154142952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 154143125 . C . PASS END=154143187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:99:0,120,1800:0,255,255:40,0 chr1 154143885 . C . PASS END=154143885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 154143889 . C . PASS END=154143964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:40:0,96,1440:0,97,255:40,0 chr1 154143968 . T . PASS END=154143968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 154144505 . C . PASS END=154144580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,123,255:40,0 chr1 154145384 . G . PASS END=154145454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,101,1404:0,101,255:40,0 chr1 154145553 . C . PASS END=154145553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:65:0,120,1800:0,162,255:40,0 chr1 154145560 . C . PASS END=154145677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,137,255:40,0 chr1 154145690 . G . PASS END=154145690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 154148591 . C . PASS END=154148600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,117:3,0 chr1 154148601 . C . PASS END=154148608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 154148609 . G . LowGQ END=154148609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 154148610 . C . PASS END=154148625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:6,0 chr1 154148626 . C . PASS END=154148674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:9,0 chr1 154148675 . T . PASS END=154148675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,233:0,10,233:8,0 chr1 154148676 . C . PASS END=154148698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,282:0,27,255:9,0 chr1 154148699 . T . PASS END=154148699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:6,0 chr1 154148700 . T . PASS END=154148708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 154148709 . C . PASS END=154148709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 154148710 . C . PASS END=154148710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr1 154148711 . A . PASS END=154148724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 154155464 . C . PASS END=154155465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 154155466 . G . PASS END=154155519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,474:0,42,255:18,0 chr1 154155520 . C . PASS END=154155537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 154155538 . G . PASS END=154155581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:19,0 chr1 154155582 . G . PASS END=154155595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr1 154163662 . A . PASS END=154163787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:50:0,109,1800:0,109,255:40,0 chr1 154164378 . C . PASS END=154164468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:29:0,87,1072:0,87,255:40,0 chr1 154164469 . A . PASS END=154164469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1374:0,54,255:39,0 chr1 154164470 . T . PASS END=154164477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1340:0,82,255:40,0 chr1 154164478 . T . PASS END=154164478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1313:0,68,255:36,0 chr1 154164479 . T . PASS END=154164491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1350:0,81,255:37,0 chr1 154164492 . C . PASS END=154164493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:30,0 chr1 154164494 . T . PASS END=154164494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 154171903 . T . PASS END=154172004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:88:38:0,88,1422:0,88,255:40,0 chr1 154172935 . C . PASS END=154172946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,939:0,78,255:26,0 chr1 154172947 . C . PASS END=154172951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154172952 . T . PASS END=154172952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 154172953 . G . PASS END=154172958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:30,0 chr1 154172959 . T . PASS END=154172959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 154172960 . G . PASS END=154173046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,89,255:40,0 chr1 154173047 . G . PASS END=154173064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,900:0,61,255:26,0 chr1 154178074 . C . PASS END=154178078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,207,255:40,0 chr1 154178079 . G A, 46.71 PASS DP=70;MQ=250.00;MQRankSum=7.008;ReadPosRankSum=7.008;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,28,0:0.406,0.000:69:20,13,0:21,15,0:46:81,0,50,936,1466,2402:255,0,255:40,0:4.6713e+01,1.1442e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,23,16,12:21,20,17,11 chr1 154178080 . A . PASS END=154178114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:66:0,120,1800:0,183,255:40,0 chr1 154178751 . C . PASS END=154178783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,132,255:40,0 chr1 154179929 . T . PASS END=154179935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 154179936 . G . PASS END=154179940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154179941 . C . PASS END=154179944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154179945 . A . PASS END=154179945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 154179946 . A . PASS END=154179946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154179947 . T . PASS END=154179947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 154179948 . G . PASS END=154179956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 154179957 . T . PASS END=154179957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 154179958 . T . PASS END=154179975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,824:0,61,255:24,0 chr1 154179976 . A . PASS END=154179976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,860:0,36,255:24,0 chr1 154179977 . T . PASS END=154179979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,834:0,75,255:25,0 chr1 154179980 . A . PASS END=154179980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 154179981 . A . PASS END=154179985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 154179986 . G . PASS END=154179994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 154179995 . A . PASS END=154179995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 154179996 . C . PASS END=154179999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,820:0,80,255:27,0 chr1 154180000 . T . PASS END=154180024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,953:0,62,255:26,0 chr1 154180025 . T . PASS END=154180040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:29,0 chr1 154180041 . G . PASS END=154180057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,992:0,70,255:26,0 chr1 154180058 . G . PASS END=154180060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154180061 . C . PASS END=154180101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 154180102 . A . PASS END=154180103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 154180104 . C . PASS END=154180119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 154180120 . T . PASS END=154180124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 154184792 . T . PASS END=154184798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154184799 . G . PASS END=154184805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:30,0 chr1 154184806 . G . PASS END=154184806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 154184807 . C . PASS END=154184819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 154184820 . T . PASS END=154184821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1053:0,71,255:28,0 chr1 154184822 . C . PASS END=154184822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154184823 . T . PASS END=154184823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 154184824 . G . PASS END=154184826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154184827 . A . PASS END=154184827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:28,0 chr1 154184828 . G . PASS END=154184828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154184829 . C . PASS END=154184829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 154184830 . G . PASS END=154184842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 154184843 . C . PASS END=154184845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 154184846 . G . PASS END=154184846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 154184847 . C . PASS END=154184847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 154184848 . C . PASS END=154184851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 154184852 . G . PASS END=154184852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 154184853 . A . PASS END=154184853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154184854 . C . PASS END=154184854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:27,0 chr1 154184934 . C . PASS END=154184937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1016:0,71,255:25,0 chr1 154184938 . G . PASS END=154184938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 154184939 . T . PASS END=154184947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,83,255:26,0 chr1 154184948 . G . PASS END=154184950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 154184951 . C . PASS END=154184951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 154184952 . T . PASS END=154184979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1172:0,83,255:36,0 chr1 154184980 . A . PASS END=154184980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr1 154184981 . T . PASS END=154185100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:36:0,80,1136:0,80,255:40,0 chr1 154186369 . C . PASS END=154186422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,143,255:40,0 chr1 154186933 . T . PASS END=154186955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1360:0,101,255:39,0 chr1 154186956 . T . PASS END=154187029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:37:0,86,1299:0,86,255:40,0 chr1 154187030 . A . PASS END=154187030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:27,0 chr1 154187031 . T . PASS END=154187039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1164:0,85,255:30,0 chr1 154187040 . T . PASS END=154187047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,76,255:23,0 chr1 154187048 . G . PASS END=154187048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 154187049 . T . PASS END=154187050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,93,255:22,0 chr1 154191192 . T . PASS END=154191258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:33:0,85,1188:0,85,255:40,0 chr1 154191259 . G . PASS END=154191259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:29,0 chr1 154191260 . G . PASS END=154191261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1266:0,84,255:30,0 chr1 154192312 . C . PASS END=154192403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1228:0,88,255:40,0 chr1 154192404 . G . PASS END=154192413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,88,255:25,0 chr1 154192818 . C . PASS END=154192883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,107,1482:0,107,255:40,0 chr1 154197600 . A . PASS END=154197689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,135,255:40,0 chr1 154199758 . G . PASS END=154199778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,191,255:40,0 chr1 154199779 . C . PASS END=154199835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,180,255:40,0 chr1 154201091 . T . PASS END=154201201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:98:44:0,98,1590:0,98,255:40,0 chr1 154207067 . C . PASS END=154207071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:24,0 chr1 154207072 . C . PASS END=154207072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 154207073 . T . PASS END=154207093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:24:0,67,846:0,67,255:26,0 chr1 154207094 . A . PASS END=154207094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,931:0,45,255:25,0 chr1 154207095 . A . PASS END=154207095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154207096 . G . PASS END=154207267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1003:0,83,255:40,0 chr1 154207268 . G . PASS END=154207268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 154207672 . T . PASS END=154207672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,767:0,56,255:27,0 chr1 154207673 . T . PASS END=154207673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154207674 . C . PASS END=154207674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 154207675 . G . PASS END=154207687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 154207688 . T . PASS END=154207689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,992:0,70,255:29,0 chr1 154207690 . G . PASS END=154207753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1103:0,86,255:38,0 chr1 154207754 . T . PASS END=154207761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,74,255:26,0 chr1 154207762 . G . PASS END=154207770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:21:0,54,810:0,63,255:19,0 chr1 154209042 . G . PASS END=154209087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:89:0,120,1800:0,233,255:40,0 chr1 154209500 . A . PASS END=154209510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:37:0,91,1543:0,91,255:40,0 chr1 154209511 . C . PASS END=154209511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1398:0,71,255:40,0 chr1 154209512 . A . PASS END=154209612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:40:0,96,1440:0,98,255:40,0 chr1 154213989 . G . PASS END=154214041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,138,255:40,0 chr1 154214208 . A . PASS END=154214273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:51:0,91,1687:0,91,255:40,0 chr1 154215693 . C . PASS END=154215707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1125:0,93,255:31,0 chr1 154215708 . A . PASS END=154215708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:29,0 chr1 154215709 . T . PASS END=154215709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:29,0 chr1 154215710 . C . PASS END=154215752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:32,0 chr1 154215753 . A . PASS END=154215753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1001:0,54,255:27,0 chr1 154215754 . A . PASS END=154215761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 154215762 . A . PASS END=154215778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 154218680 . A . PASS END=154218680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 154218681 . A . PASS END=154218685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,983:0,90,255:30,0 chr1 154218686 . C . PASS END=154218686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 154218687 . C . PASS END=154218690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1088:0,90,255:34,0 chr1 154218691 . C . PASS END=154218801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:34:0,89,1258:0,89,255:40,0 chr1 154218802 . C . PASS END=154218802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:29,0 chr1 154218803 . T . PASS END=154218804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 154218805 . C . PASS END=154218819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,75,255:26,0 chr1 154218820 . C . PASS END=154218820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 154218821 . T . PASS END=154218821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 154218822 . T . PASS END=154218822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 154218823 . C . PASS END=154218827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 154218828 . A . PASS END=154218844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 154218845 . C . PASS END=154218846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 154218847 . G . PASS END=154218848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 154218849 . A . PASS END=154218855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:19:0,33,495:0,57,255:13,0 chr1 154221715 . G . PASS END=154221734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 154221735 . A . PASS END=154221735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,945:0,37,255:24,0 chr1 154221736 . T . PASS END=154221738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:26,0 chr1 154221739 . G . PASS END=154221743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154221744 . T . PASS END=154221751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 154221752 . A . PASS END=154221906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:81:29:0,81,1215:0,87,255:40,0 chr1 154221907 . C . PASS END=154221913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:66:32:0,66,990:0,96,255:25,0 chr1 154223517 . A . PASS END=154223542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:18,0 chr1 154223543 . G . PASS END=154223562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr1 154223563 . G . PASS END=154223568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 154223569 . G . PASS END=154223569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154223570 . G . PASS END=154223572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154223573 . T . PASS END=154223574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154223575 . T . PASS END=154223694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1213:0,83,255:37,0 chr1 154223695 . A . PASS END=154223695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:29,0 chr1 154223696 . C . PASS END=154223712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1089:0,82,255:32,0 chr1 154223713 . T . PASS END=154223713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:29,0 chr1 154223714 . T . PASS END=154223717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1093:0,80,255:30,0 chr1 154223718 . A . PASS END=154223718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:28,0 chr1 154223719 . C . PASS END=154223734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1178:0,83,255:35,0 chr1 154223735 . C . PASS END=154223735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr1 154223736 . C . PASS END=154223794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1202:0,84,255:36,0 chr1 154223957 . A . PASS END=154224129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:29:0,81,1072:0,87,255:40,0 chr1 154226376 . T . PASS END=154226391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:30:0,89,1125:0,89,255:36,0 chr1 154226392 . A . PASS END=154226392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:35,0 chr1 154226393 . T . PASS END=154226544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1215:0,92,255:40,0 chr1 154226545 . A . PASS END=154226546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 154226547 . G . PASS END=154226556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:28,0 chr1 154226557 . C . PASS END=154226565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:28:0,63,945:0,68,255:26,0 chr1 154227312 . A . PASS END=154227313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:52:0,120,1800:0,123,255:40,0 chr1 154227314 . T . PASS END=154227314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1738:0,76,255:40,0 chr1 154227315 . G . PASS END=154227343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:83:53:0,83,1800:0,83,255:40,0 chr1 154227344 . A . PASS END=154227366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,109,1800:0,109,255:40,0 chr1 154227628 . G . PASS END=154227632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,831:0,69,255:26,0 chr1 154227633 . A . PASS END=154227639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:30,0 chr1 154227640 . C . PASS END=154227640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 154227641 . T . PASS END=154227646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 154227647 . G . PASS END=154227658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1116:0,77,255:26,0 chr1 154227659 . A . PASS END=154227671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1058:0,84,255:33,0 chr1 154227672 . A . PASS END=154227672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:34,0 chr1 154227673 . G . PASS END=154227702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1221:0,89,255:38,0 chr1 154227703 . C . PASS END=154227703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr1 154227704 . A . PASS END=154227734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1366:0,101,255:40,0 chr1 154227735 . T . PASS END=154227735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1396:0,68,255:38,0 chr1 154227736 . C . PASS END=154227760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1260:0,94,255:40,0 chr1 154227761 . C . PASS END=154227768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1031:0,71,255:26,0 chr1 154227769 . A . PASS END=154227769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,906:0,37,255:23,0 chr1 154227770 . G . PASS END=154227772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,962:0,67,255:22,0 chr1 154227773 . T . PASS END=154227773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:20,0 chr1 154227774 . C . PASS END=154227776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 154227777 . A . PASS END=154227783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 154227784 . C . PASS END=154227784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:15,0 chr1 154227785 . C . PASS END=154227802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,659:0,41,255:18,0 chr1 154228159 . C . PASS END=154228231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,144,255:40,0 chr1 154229539 . C . PASS END=154229540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 154229541 . C . PASS END=154229645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1025:0,84,255:40,0 chr1 154229646 . T . PASS END=154229646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:33,0 chr1 154229647 . C . PASS END=154229734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1202:0,83,255:37,0 chr1 154229822 . G . PASS END=154229910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:37:0,86,1390:0,86,255:40,0 chr1 154231453 . C . PASS END=154231506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,145,255:40,0 chr1 154232424 . G . PASS END=154232505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:32:0,80,1169:0,80,255:40,0 chr1 154233368 . G . PASS END=154233387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,595:0,54,255:19,0 chr1 154233388 . C . PASS END=154233412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:25,0 chr1 154233413 . C . PASS END=154233413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 154233414 . G . PASS END=154233421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 154233422 . C . PASS END=154233491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1067:0,82,255:33,0 chr1 154233492 . G . PASS END=154233492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr1 154233493 . C . PASS END=154233530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,88,255:34,0 chr1 154233531 . T . PASS END=154233534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:66:35:0,66,1170:0,66,255:26,0 chr1 154233535 . G . PASS END=154233535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 154233536 . G . PASS END=154233563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr1 154233564 . G . PASS END=154233564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 154233565 . T . PASS END=154233569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 154233570 . G . PASS END=154233571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,782:0,50,255:19,0 chr1 154233572 . C . PASS END=154233572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154233573 . T . PASS END=154233579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:19,0 chr1 154233580 . T . PASS END=154233585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 154234068 . G . PASS END=154234173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1260:0,98,255:40,0 chr1 154235579 . G . PASS END=154235628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,125,255:40,0 chr1 154238977 . G . PASS END=154239014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:36:0,90,1294:0,90,255:40,0 chr1 154239015 . A . PASS END=154239015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:37,0 chr1 154239016 . T . PASS END=154239022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:41:0,85,1488:0,85,255:38,0 chr1 154239023 . T . PASS END=154239023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1364:0,65,255:31,0 chr1 154239024 . T . PASS END=154239035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1260:0,101,255:32,0 chr1 154239036 . A . PASS END=154239044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:29:0,66,990:0,87,255:25,0 chr1 154241233 . C . PASS END=154241238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:24,0 chr1 154241239 . T . PASS END=154241239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,742:0,55,255:23,0 chr1 154241240 . T . PASS END=154241244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 154241245 . A . PASS END=154241245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 154241246 . A . PASS END=154241268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:25,0 chr1 154241269 . C . PASS END=154241269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 154241270 . C . PASS END=154241271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 154241272 . G . PASS END=154241272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 154241273 . C . PASS END=154241274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 154241275 . G . PASS END=154241275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 154241276 . C . PASS END=154241276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 154241277 . T . PASS END=154241284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr1 154241285 . A . PASS END=154241285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 154241286 . C . PASS END=154241286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154241287 . T . PASS END=154241287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 154241288 . T . PASS END=154241293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:28,0 chr1 154241294 . C . PASS END=154241305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:25,0 chr1 154241306 . G . PASS END=154241310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:29,0 chr1 154241311 . G . PASS END=154241311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 154241312 . G . PASS END=154241317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 154241318 . T . PASS END=154241318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 154241319 . C . PASS END=154241328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 154241329 . A . PASS END=154241329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr1 154241330 . C . PASS END=154241335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154241336 . C . PASS END=154241345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 154241346 . A . PASS END=154241346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:22,0 chr1 154241347 . C . PASS END=154241350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,822:0,70,255:26,0 chr1 154241351 . C . PASS END=154241351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,789:0,53,255:22,0 chr1 154241352 . C . PASS END=154241352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,782:0,21,255:20,0 chr1 154241353 . C . LowGQ END=154241353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,717:16,0,255:19,0 chr1 154241354 . C . PASS END=154241355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,768:0,31,255:21,0 chr1 154241356 . T . LowGQ END=154241356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,634:6,0,255:21,0 chr1 154241357 . T . PASS END=154241357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,781:0,42,255:23,0 chr1 154241358 . T . PASS END=154241358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,687:0,31,255:19,0 chr1 154241359 . A . LowGQ END=154241359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,6:27:0:27:0,0,566:41,0,255:17,0 chr1 154241360 . T . PASS END=154241361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,870:0,64,255:22,0 chr1 154241362 . C . PASS END=154241362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:22,0 chr1 154241363 . A . LowGQ END=154241363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,5:25:0:25:0,0,588:8,0,255:17,0 chr1 154241364 . C . PASS END=154241366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:25:25:0,25,660:0,25,255:20,0 chr1 154241367 . T . PASS END=154241367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,677:0,19,255:19,0 chr1 154241368 . C . PASS END=154241369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:24:0,42,762:0,42,255:19,0 chr1 154241370 . G . PASS END=154241370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 154241371 . A . PASS END=154241371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:19,0 chr1 154241372 . C . PASS END=154241372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,696:0,22,255:16,0 chr1 154241373 . C . PASS END=154241373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:18,0 chr1 154241374 . C . PASS END=154241374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:18,0 chr1 154241375 . C . PASS END=154241375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:19,0 chr1 154241376 . C . PASS END=154241376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,687:0,30,255:20,0 chr1 154241377 . C . PASS END=154241377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154241378 . A . PASS END=154241379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,673:0,19,255:17,0 chr1 154241380 . C . PASS END=154241380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:19,0 chr1 154241381 . A . PASS END=154241381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,643:0,19,255:17,0 chr1 154241382 . G . PASS END=154241382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 154241383 . C . PASS END=154241384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:21:0,30,615:0,30,255:19,0 chr1 154241385 . G . PASS END=154241387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,624:0,46,255:20,0 chr1 154241388 . G . PASS END=154241388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,634:0,27,255:19,0 chr1 154241389 . C . PASS END=154241389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:18,0 chr1 154241390 . A . PASS END=154241390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 154241391 . T . PASS END=154241391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,623:0,16,255:18,0 chr1 154241392 . T . PASS END=154241392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,524:0,32,255:18,0 chr1 154241393 . C . PASS END=154241393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 154241394 . T . PASS END=154241394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 154241395 . C . PASS END=154241395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 154241396 . A . PASS END=154241396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:19,0 chr1 154241397 . G . PASS END=154241398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 154241399 . T . PASS END=154241399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,685:0,30,255:19,0 chr1 154241400 . C . PASS END=154241400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 154241401 . C . PASS END=154241401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:18,0 chr1 154241402 . T . PASS END=154241402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:19,0 chr1 154241403 . T . LowGQ END=154241403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,576:6,0,255:17,0 chr1 154241404 . C . PASS END=154241404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr1 154241405 . A . PASS END=154241405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,653:0,33,255:18,0 chr1 154241406 . C . LowGQ END=154241406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,609:4,0,255:18,0 chr1 154241407 . C . PASS END=154241407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,627:0,30,255:18,0 chr1 154241408 . A . LowGQ END=154241408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,538:7,0,255:18,0 chr1 154241409 . T . PASS END=154241409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,605:0,30,255:19,0 chr1 154241410 . C . PASS END=154241411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,524:0,15,255:19,0 chr1 154241412 . C . PASS END=154241413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 154241414 . T . PASS END=154241414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,632:0,13,255:18,0 chr1 154241415 . G . PASS END=154241415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154241416 . C . PASS END=154241417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr1 154241418 . G . PASS END=154241418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,625:0,32,255:18,0 chr1 154241419 . C . PASS END=154241419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,643:0,8,255:18,0 chr1 154241420 . A . PASS END=154241420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,662:0,32,255:19,0 chr1 154241421 . G . PASS END=154241427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:19,0 chr1 154241428 . C . PASS END=154241428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:16,0 chr1 154241429 . A . PASS END=154241430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:16,0 chr1 154241838 . C . PASS END=154241888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,182,255:40,0 chr1 154242676 . A . PASS END=154242683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:25,0 chr1 154242684 . C . PASS END=154242685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 154242686 . G . PASS END=154242693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 154242694 . A . PASS END=154242702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 154242703 . A . PASS END=154242703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 154242704 . G . PASS END=154242718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:32,0 chr1 154242719 . A . PASS END=154242719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1080:0,65,255:29,0 chr1 154242720 . G . PASS END=154242735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 154242736 . T . PASS END=154242747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,970:0,67,255:24,0 chr1 154242748 . A . PASS END=154242748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 154242749 . G . PASS END=154242754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 154242755 . G . PASS END=154242755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 154242756 . C . PASS END=154242765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,917:0,72,255:25,0 chr1 154242766 . A . PASS END=154242771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 154243357 . G . PASS END=154243395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,111,1543:0,113,255:40,0 chr1 154245050 . A . PASS END=154245050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 154245200 . A . PASS END=154245204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154245205 . C . PASS END=154245205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154245206 . C . PASS END=154245206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 154245207 . T . PASS END=154245233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1072:0,84,255:30,0 chr1 154245234 . G . PASS END=154245236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 154245237 . T . PASS END=154245237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154245238 . T . PASS END=154245238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 154245239 . C . PASS END=154245244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154245245 . C . PASS END=154245252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr1 154245812 . C . PASS END=154245834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,540:0,40,255:20,0 chr1 154245835 . G . PASS END=154245845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,689:0,63,255:22,0 chr1 154245846 . G . PASS END=154245846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 154245847 . A . PASS END=154245852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr1 154245853 . A . PASS END=154245854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:20,0 chr1 154245855 . G . PASS END=154245860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 154245861 . G . PASS END=154245861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 154245862 . A . PASS END=154245862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154245863 . G . PASS END=154245863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:20,0 chr1 154245864 . G . PASS END=154245876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,740:0,69,255:23,0 chr1 154245877 . A . PASS END=154245877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:22,0 chr1 154245878 . A . PASS END=154245894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,831:0,69,255:25,0 chr1 154245895 . G . PASS END=154245895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 154245896 . T . PASS END=154245917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 154245918 . C . PASS END=154245925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 154245926 . C . PASS END=154245926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr1 154245927 . C . PASS END=154245958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1102:0,87,255:29,0 chr1 154245959 . C . PASS END=154245960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 154245961 . G . PASS END=154245970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1039:0,81,255:27,0 chr1 154245971 . A . PASS END=154246003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:26,0 chr1 154246004 . T . PASS END=154246005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 154246006 . A . PASS END=154246006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:19,0 chr1 154246007 . C . PASS END=154246007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 154246008 . C . PASS END=154246010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 154246011 . G . PASS END=154246015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 154246016 . A . PASS END=154246016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 154246017 . G . PASS END=154246025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 154246026 . A . PASS END=154246026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 154246027 . G . PASS END=154246027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154246028 . C . PASS END=154246028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 154246029 . A . PASS END=154246038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 154246039 . A . PASS END=154246039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 154246040 . T . PASS END=154246040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154246041 . A . PASS END=154246041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 154246042 . T . PASS END=154246042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154246043 . G . PASS END=154246066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,681:0,41,255:20,0 chr1 154246067 . T . PASS END=154246067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 154246068 . C . PASS END=154246074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr1 154246226 . C . PASS END=154246437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1225:0,89,255:40,0 chr1 154247422 . G . PASS END=154247422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 154247426 . T . PASS END=154247478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:64:0,120,1800:0,179,255:40,0 chr1 154247554 . T . PASS END=154247737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,120,1800:0,121,255:40,0 chr1 154247869 . A . PASS END=154247959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:36:0,98,1394:0,98,255:40,0 chr1 154248092 . A . PASS END=154248178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,124,255:40,0 chr1 154248224 . A . PASS END=154248224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 154248257 . C . PASS END=154248257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,178,255:40,0 chr1 154293632 . A . PASS END=154293633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 154293634 . G . PASS END=154293637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1150:0,90,255:32,0 chr1 154293638 . T . PASS END=154293661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1188:0,96,255:34,0 chr1 154293662 . A . PASS END=154293662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:33,0 chr1 154293663 . T . PASS END=154293674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:92:34:0,92,1316:0,92,255:33,0 chr1 154293675 . G A, 49.76 PASS DP=36;MQ=126.18;MQRankSum=0.856;ReadPosRankSum=2.472;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,17,0:0.472,0.000:36:8,6,0:11,11,0:48:85,0,50,608,679,1288:255,0,255:19,0:4.9758e+01,6.9634e-05,5.2600e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,9,8:13,6,8,9 chr1 154293676 . G . PASS END=154293698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,95,255:34,0 chr1 154293699 . A . PASS END=154293699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 154293700 . G . PASS END=154293700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 154293701 . T . PASS END=154293709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1084:0,74,255:26,0 chr1 154293710 . G . PASS END=154293710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154293711 . A . PASS END=154293711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154293712 . G . PASS END=154293712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154293713 . T . PASS END=154293713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 154293714 . T . PASS END=154293715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154293716 . C . PASS END=154293729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,781:0,64,255:26,0 chr1 154293730 . A . PASS END=154293730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:20,0 chr1 154293731 . C . PASS END=154293736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:23,0 chr1 154294406 . C . PASS END=154294410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 154294411 . C . PASS END=154294411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 154294412 . C . PASS END=154294424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 154294425 . C . PASS END=154294425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154294426 . T . PASS END=154294438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,992:0,68,255:26,0 chr1 154294439 . G . PASS END=154294440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 154294441 . C . PASS END=154294463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,911:0,78,255:26,0 chr1 154294464 . A G, 2.63 DRAGENSnpHardQUAL DP=26;MQ=55.62;MQRankSum=-1.457;ReadPosRankSum=0.533;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:22,4,0:0.154,0.000:26:10,3,0:12,1,0:3:34,0,45,145,145,145:77,0,255:21,0:2.6334e+00,3.4231e+00,5.0973e+01,1.4796e+02,1.8273e+02,1.5097e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,10,1,3:12,10,2,2:154294464 chr1 154294465 . C . PASS END=154294470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 154294471 . C T, 2.63 DRAGENSnpHardQUAL DP=26;MQ=55.62;MQRankSum=-1.457;ReadPosRankSum=-1.030;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:22,4,0:0.154,0.000:26:10,3,0:12,1,0:3:34,0,45,145,145,145:77,0,255:21,0:2.6334e+00,3.4231e+00,5.0973e+01,1.4796e+02,1.8273e+02,1.5097e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,10,1,3:12,10,2,2:154294464 chr1 154294472 . A . PASS END=154294498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 154294499 . G . LowGQ END=154294499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,759:5,0,255:20,0 chr1 154294500 . T . PASS END=154294510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 154294511 . A . PASS END=154294511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 154294512 . T . PASS END=154294513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154294514 . T . PASS END=154294524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,707:0,49,255:19,0 chr1 154294525 . T . PASS END=154294529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 154294530 . T . PASS END=154294533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 154294534 . A . PASS END=154294534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:15,0 chr1 154294535 . G . PASS END=154294535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 154295458 . G . PASS END=154295554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:29:0,85,1064:0,85,255:40,0 chr1 154295555 . T . PASS END=154295591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,131,255:40,0 chr1 154295592 . C T, 48.37 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=1.465;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:14,7,0:14,14,0:46:83,0,47,183,183,183:255,0,255:26,0:4.8366e+01,1.0665e-04,5.0000e+01,1.8314e+02,2.1791e+02,1.8615e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,13,12,9:15,13,10,11 chr1 154295593 . A . PASS END=154295595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,120,1800:0,131,255:40,0 chr1 154295717 . A . PASS END=154295835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:43:0,96,1530:0,96,255:40,0 chr1 154296065 . G . PASS END=154296066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154296067 . T . PASS END=154296068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154296069 . T . PASS END=154296069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 154296070 . G . PASS END=154296075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:29,0 chr1 154296076 . T . PASS END=154296076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 154296077 . G . PASS END=154296080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:31,0 chr1 154296081 . T . PASS END=154296081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 154296082 . G . PASS END=154296370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:31:0,93,1157:0,93,255:40,0 chr1 154296758 . T . PASS END=154296758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 154296759 . G . PASS END=154296771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:8,0 chr1 154296772 . G . PASS END=154296801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 154296802 . T . PASS END=154296807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 154296808 . C . PASS END=154296821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 154296822 . G . PASS END=154296826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 154296827 . T . PASS END=154296827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 154296828 . T . PASS END=154296831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 154296832 . A . PASS END=154296844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,512:0,31,255:15,0 chr1 154296845 . T . PASS END=154296846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 154296847 . T . PASS END=154296847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 154296848 . G . PASS END=154296899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,623:0,41,255:19,0 chr1 154296900 . A . PASS END=154296900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 154296901 . A . PASS END=154296902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154296903 . G . PASS END=154296910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 154296911 . G . PASS END=154296952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,637:0,48,255:19,0 chr1 154296953 . A . PASS END=154296956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154300276 . A . PASS END=154300337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:75:0,120,1800:0,194,255:40,1 chr1 154300581 . G . PASS END=154300639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,103,1342:0,103,255:40,0 chr1 154300640 . G . PASS END=154300640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1372:0,54,255:37,0 chr1 154300641 . C . PASS END=154300648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1482:0,110,255:40,0 chr1 154301464 . A . PASS END=154301464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 154301465 . T . PASS END=154301465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 154301466 . G . PASS END=154301469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,623:0,51,255:18,0 chr1 154301470 . G . PASS END=154301470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 154301471 . T . PASS END=154301471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 154301472 . C . PASS END=154301472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 154301473 . C . PASS END=154301481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr1 154301482 . A . PASS END=154301482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,520:0,21,255:16,0 chr1 154301483 . T . PASS END=154301484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 154301485 . C . PASS END=154301485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:17,0 chr1 154301486 . C . PASS END=154301487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:18,0 chr1 154301488 . G . PASS END=154301488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 154301489 . A . PASS END=154301490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 154301491 . A . PASS END=154301491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:1:19:0,1,484:0,1,255:15,0 chr1 154301492 . A . PASS END=154301493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 154301494 . T . PASS END=154301494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,576:0,18,255:14,0 chr1 154301495 . G . PASS END=154301499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,570:0,43,255:15,0 chr1 154301500 . C . PASS END=154301500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:14,0 chr1 154301501 . G . PASS END=154301501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,427:0,4,255:13,0 chr1 154301502 . G . PASS END=154301506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 154301507 . A . LowGQ END=154301508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,372:0,0,255:14,0 chr1 154301509 . G . PASS END=154301512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154301513 . C . PASS END=154301513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 154301514 . T . PASS END=154301514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,427:0,15,255:12,0 chr1 154301515 . C . PASS END=154301515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154301516 . C . PASS END=154301516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:13,0 chr1 154301517 . C . PASS END=154301517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154301518 . T . PASS END=154301519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:13,0 chr1 154301520 . T . LowGQ END=154301520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,429:5,0,255:13,0 chr1 154301521 . T . PASS END=154301521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154301522 . G . PASS END=154301523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,454:0,31,255:12,0 chr1 154301524 . A . PASS END=154301525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:11,0 chr1 154301526 . C . PASS END=154301527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 154301528 . G . PASS END=154301529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 154301530 . A . PASS END=154301531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 154301532 . G . PASS END=154301532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,376:0,25,255:11,0 chr1 154301533 . A . PASS END=154301534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:12,0 chr1 154301535 . G . PASS END=154301535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,302:0,3,255:10,0 chr1 154301536 . C . PASS END=154301538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:12,0 chr1 154301539 . T . PASS END=154301539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:2:12:0,2,213:0,2,213:9,0 chr1 154301540 . C . PASS END=154301540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 154301541 . T . PASS END=154301542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 154301543 . G . PASS END=154301543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 154301544 . G . PASS END=154301547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,386:0,20,255:9,0 chr1 154301548 . A . LowGQ END=154301548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,221:42,0,255:8,0 chr1 154301549 . C . PASS END=154301549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 154301550 . A . LowGQ END=154301550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,263:0,0,255:6,0 chr1 154301551 . G . PASS END=154301551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 154302872 . A . PASS END=154302873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:48:0,111,1609:0,111,255:40,0 chr1 154302874 . G . PASS END=154302874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:28:49:0,28,1451:0,28,255:40,0 chr1 154302875 . A . PASS END=154302876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,114,1690:0,114,255:40,0 chr1 154302877 . G . PASS END=154302877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,7:50:6:50:0,6,1412:0,6,255:40,0 chr1 154302878 . A . PASS END=154302879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr1 154302880 . A . PASS END=154302880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:53:50:0,53,1490:0,53,255:40,0 chr1 154302881 . G . PASS END=154302882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr1 154302883 . A . LowGQ END=154302883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,9:51:0:51:0,0,1294:85,0,255:40,0 chr1 154302884 . G . PASS END=154302888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:52:0,84,1685:0,84,255:40,0 chr1 154302889 . C . PASS END=154302889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,6:52:14:52:0,14,1543:0,14,255:40,0 chr1 154302890 . G . PASS END=154302892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr1 154302893 . C . PASS END=154302893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:15:53:0,15,1504:0,15,255:38,0 chr1 154302894 . T . PASS END=154302895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,109,1687:0,109,255:40,0 chr1 154302896 . A . PASS END=154302896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:9:53:0,9,1545:0,9,255:39,0 chr1 154302897 . T . PASS END=154302897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:53:0,120,1800:0,126,255:40,0 chr1 154302898 . G . PASS END=154302898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:68:52:0,68,1660:0,68,255:40,0 chr1 154302899 . A . PASS END=154302901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,103,1654:0,103,255:40,0 chr1 154302902 . G . PASS END=154302902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1423:0,77,255:37,0 chr1 154302903 . A . PASS END=154302903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr1 154302904 . G . LowGQ END=154302904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,7:47:0:47:0,0,1213:56,0,255:35,0 chr1 154302905 . A . PASS END=154302908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:91:46:0,91,1470:0,91,255:40,0 chr1 154302909 . C . PASS END=154302909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:55:46:0,55,1307:0,55,255:37,0 chr1 154302910 . A . PASS END=154302910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1562:0,118,255:40,0 chr1 154302911 . A . PASS END=154302911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:35:45:0,35,1249:0,35,255:37,0 chr1 154302912 . T . PASS END=154302912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1426:0,112,255:40,0 chr1 154302913 . G . PASS END=154302913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:48:43:0,48,1187:0,48,255:39,0 chr1 154302914 . A . PASS END=154302914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1395:0,112,255:40,0 chr1 154302915 . G . LowGQ END=154302915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,10:43:0:43:0,0,987:59,0,255:32,0 chr1 154302916 . A . PASS END=154302917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 154302918 . A . PASS END=154302918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1299:0,79,255:38,0 chr1 154302919 . T . PASS END=154302919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 154302920 . T . PASS END=154302920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:32:44:0,32,1121:0,32,255:36,0 chr1 154302921 . C . PASS END=154302922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,101,1367:0,101,255:39,0 chr1 154302923 . A . PASS END=154302923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:30:45:0,30,1260:0,30,255:35,0 chr1 154302924 . G . PASS END=154302924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1303:0,52,255:35,0 chr1 154302925 . T . PASS END=154302925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1468:0,102,255:38,0 chr1 154302926 . A . PASS END=154302926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1232:0,65,255:33,0 chr1 154302927 . T . PASS END=154302927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:32:44:0,32,1217:0,32,255:31,0 chr1 154302928 . G . PASS END=154302928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1389:0,96,255:36,0 chr1 154302929 . C . PASS END=154302929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:29:43:0,29,1081:0,29,255:32,0 chr1 154302930 . G . PASS END=154302930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,128,255:38,0 chr1 154303291 . A . PASS END=154303404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:83:59:0,83,1800:0,83,255:40,0 chr1 154303524 . T . PASS END=154303622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,120,255:40,0 chr1 154303920 . T . PASS END=154303931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1080:0,90,255:31,0 chr1 154303932 . A . PASS END=154303932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,985:0,76,255:26,0 chr1 154303933 . G . PASS END=154303938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 154303939 . A . PASS END=154303969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1107:0,80,255:33,0 chr1 154303970 . G . PASS END=154303972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 154303973 . C . PASS END=154303975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 154303976 . T C, 49.93 PASS DP=33;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=3.296;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,16,0:0.485,0.000:33:11,9,0:6,7,0:48:85,0,50,564,592,1156:255,0,255:15,0:4.9933e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,7,9:10,7,8,8 chr1 154303977 . G . PASS END=154303979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,82,255:28,0 chr1 154303980 . A . PASS END=154303980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 154303981 . T . PASS END=154303981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 154304082 . C . PASS END=154304104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1218:0,96,255:34,0 chr1 154304105 . A . PASS END=154304105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:28,0 chr1 154304106 . T . PASS END=154304120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 154304121 . T . PASS END=154304121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr1 154304122 . A . PASS END=154304129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1034:0,83,255:30,0 chr1 154304130 . G . PASS END=154304130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 154304131 . C . PASS END=154304131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 154304132 . T . PASS END=154304132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 154304133 . A . PASS END=154304138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 154304139 . T . PASS END=154304139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 154304140 . A . PASS END=154304145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 154304146 . T . PASS END=154304146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:29:32:0,29,787:0,29,255:28,0 chr1 154304147 . T . PASS END=154304148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:32,0 chr1 154304149 . G . PASS END=154304149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 154304150 . T . PASS END=154304154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1210:0,96,255:32,0 chr1 154304430 . G . PASS END=154304500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,104,1592:0,104,255:40,0 chr1 154305094 . C . PASS END=154305152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,150,255:40,0 chr1 154305153 . G . PASS END=154305173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,134,255:40,0 chr1 154306583 . G . PASS END=154306585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 154306586 . A . PASS END=154306586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1473:0,79,255:38,0 chr1 154306587 . A . PASS END=154306741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:42:0,96,1131:0,96,255:40,0 chr1 154306979 . G . PASS END=154307067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1318:0,92,255:40,0 chr1 154309824 . A . PASS END=154309829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,795:0,61,255:26,0 chr1 154309830 . G . PASS END=154309830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154309831 . G . PASS END=154309834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154309835 . C . PASS END=154309843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 154309844 . C . PASS END=154309844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 154309845 . A . PASS END=154309977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1111:0,81,255:40,0 chr1 154309978 . T . PASS END=154309978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1317:0,62,255:35,0 chr1 154309979 . C . PASS END=154309980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 154309981 . T . PASS END=154309981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr1 154309982 . C . PASS END=154310010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1288:0,81,255:39,0 chr1 154310011 . T . PASS END=154310047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:34:0,90,1274:0,90,255:40,0 chr1 154310048 . C G, 49.95 PASS DP=43;MQ=250.00;MQRankSum=5.600;ReadPosRankSum=2.588;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,21,0:0.488,0.000:43:7,12,0:15,9,0:47:85,0,47,185,185,185:255,0,255:19,0:4.9953e+01,8.7237e-05,5.0000e+01,1.8472e+02,2.1949e+02,1.8773e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,10,12,9:7,15,11,10 chr1 154310049 . T . PASS END=154310059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,105,1575:0,113,255:38,0 chr1 154310060 . A . PASS END=154310060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:35,0 chr1 154310061 . G . PASS END=154310085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1202:0,86,255:34,0 chr1 154310086 . C . PASS END=154310119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1094:0,86,255:33,0 chr1 154310120 . G . PASS END=154310120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154310121 . T . PASS END=154310126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 154310127 . T . PASS END=154310150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,914:0,62,255:26,0 chr1 154313330 . T . PASS END=154313330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 154313331 . G . PASS END=154313332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:30,0 chr1 154313333 . G . PASS END=154313333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 154313334 . G . PASS END=154313336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 154313337 . G . PASS END=154313337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 154313338 . T . PASS END=154313338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:28,0 chr1 154313339 . C . PASS END=154313358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1094:0,83,255:33,0 chr1 154313359 . A . PASS END=154313363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:31,1 chr1 154313364 . A . PASS END=154313530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:33:0,87,1243:0,92,255:40,0 chr1 154313531 . C . PASS END=154313538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr1 154314956 . G . PASS END=154314999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,160,255:40,0 chr1 154315272 . A . PASS END=154315272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,952:0,59,255:25,0 chr1 154315273 . G . PASS END=154315281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 154315282 . C . PASS END=154315282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 154315283 . T . PASS END=154315284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154315285 . T . PASS END=154315285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 154315286 . T . PASS END=154315301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1035:0,84,255:29,0 chr1 154315302 . C . PASS END=154315302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 154315303 . C . PASS END=154315305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 154315306 . T . PASS END=154315310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 154315311 . G . PASS END=154315311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:24,0 chr1 154315312 . A . PASS END=154315316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 154315317 . A . PASS END=154315320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154315321 . T . PASS END=154315321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,982:0,68,255:26,0 chr1 154315322 . C . PASS END=154315327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:29,0 chr1 154315328 . T . PASS END=154315328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 154315329 . T . PASS END=154315336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1033:0,87,255:29,0 chr1 154315337 . C . PASS END=154315338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154315339 . G . PASS END=154315346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 154315347 . G . PASS END=154315347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 154315348 . A . PASS END=154315357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,83,255:32,0 chr1 154315358 . G . PASS END=154315358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr1 154315359 . A . PASS END=154315367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1180:0,85,255:31,0 chr1 154315368 . C . PASS END=154315375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:31:0,65,1056:0,65,255:26,0 chr1 154315376 . G . PASS END=154315377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154315378 . A . PASS END=154315378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:25,0 chr1 154315379 . T . PASS END=154315379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,842:0,42,255:24,0 chr1 154315380 . G . PASS END=154315383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr1 154315384 . T . PASS END=154315384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,755:0,48,255:21,0 chr1 154315385 . C . PASS END=154315390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:23,0 chr1 154315391 . C . PASS END=154315391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:21,0 chr1 154315392 . C . PASS END=154315394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 154315395 . C . PASS END=154315395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,749:0,36,255:19,0 chr1 154315396 . T . PASS END=154315396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 154315397 . T . PASS END=154315399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154315400 . C . PASS END=154315409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,662:0,46,255:17,0 chr1 154315410 . A . PASS END=154315410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,676:0,32,255:16,0 chr1 154315411 . C . PASS END=154315413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr1 154315414 . T . PASS END=154315414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 154315415 . C . PASS END=154315415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:13,0 chr1 154315416 . A . PASS END=154315417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 154315418 . G . PASS END=154315420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:14,0 chr1 154315421 . A . PASS END=154315421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 154315422 . G . PASS END=154315422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 154315423 . A . PASS END=154315437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:18,0 chr1 154315589 . G . PASS END=154315598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,840:0,72,255:26,0 chr1 154315599 . C . PASS END=154315602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 154315603 . A . PASS END=154315603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 154315604 . A . PASS END=154315701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:37,0 chr1 154315702 . A . PASS END=154315702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:29,0 chr1 154315703 . T . PASS END=154315704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,95,255:29,0 chr1 154315705 . G . PASS END=154315705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:29,0 chr1 154315706 . G . PASS END=154315715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:31,0 chr1 154315716 . C . PASS END=154315716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr1 154315717 . A . PASS END=154315723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:29,0 chr1 154315724 . A . PASS END=154315747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,939:0,62,255:25,0 chr1 154315748 . A . PASS END=154315748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 154315749 . C . PASS END=154315754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 154315755 . C . PASS END=154315777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,53,255:19,0 chr1 154315929 . T . PASS END=154316044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:40:0,92,1316:0,92,255:40,0 chr1 154316369 . G . PASS END=154316371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:25,0 chr1 154316372 . T . PASS END=154316372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 154316373 . A . PASS END=154316378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 154316379 . G . PASS END=154316379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 154316380 . G . PASS END=154316380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 154316381 . G . PASS END=154316396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:31,0 chr1 154316397 . T . PASS END=154316410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1172:0,93,255:32,0 chr1 154316411 . A . PASS END=154316411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 154316412 . A . PASS END=154316423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 154316424 . A . PASS END=154316424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:27,0 chr1 154316425 . A . PASS END=154316433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 154316434 . C T, 47.82 PASS DP=34;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=3.622;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,14,0:0.412,0.000:34:11,6,0:9,8,0:47:83,0,50,493,685,1178:255,0,255:19,0:4.7820e+01,9.3449e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,7,9,5:6,14,7,7 chr1 154316435 . G . PASS END=154316471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1148:0,89,255:35,0 chr1 154316472 . C . PASS END=154316490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 154316491 . C . PASS END=154316498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 154316499 . C . PASS END=154316521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 154316522 . A . PASS END=154316523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,975:0,76,255:26,0 chr1 154316524 . C . PASS END=154316533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:29,0 chr1 154316598 . G . PASS END=154316730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:41:0,87,1462:0,87,255:40,0 chr1 154316871 . A . PASS END=154316976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:34:0,80,1255:0,80,255:40,0 chr1 154317117 . G . PASS END=154317143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,978:0,65,255:26,0 chr1 154317144 . A . PASS END=154317152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 154317153 . C T, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.375;ReadPosRankSum=2.681;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,17,0:0.607,0.000:28:7,11,0:4,6,0:47:85,0,47,591,393,984:255,0,255:11,0:5.0000e+01,8.4907e-05,5.0191e+01,4.5000e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,9,8:8,3,9,8 chr1 154317154 . G . PASS END=154317154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154317155 . T . PASS END=154317174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 154317175 . C . PASS END=154317175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 154317176 . A . PASS END=154317186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 154317187 . T . PASS END=154317187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:20,0 chr1 154317188 . C . PASS END=154317188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 154317189 . T . PASS END=154317190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154317191 . C . PASS END=154317226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,746:0,63,255:23,0 chr1 154317227 . G . PASS END=154317238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,682:0,46,255:19,0 chr1 154317239 . T . PASS END=154317239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 154317240 . G . PASS END=154317261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 154317447 . G . PASS END=154317455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 154317456 . C . PASS END=154317465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 154317466 . A . PASS END=154317487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:18,0 chr1 154317488 . G . PASS END=154317488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 154317489 . A . PASS END=154317489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,599:0,43,255:19,0 chr1 154317490 . C . PASS END=154317490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 154317491 . A . PASS END=154317491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 154317492 . G . PASS END=154317492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 154317493 . C . PASS END=154317493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 154317494 . G . PASS END=154317498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,762:0,66,255:22,0 chr1 154317499 . C . PASS END=154317499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 154317500 . C . PASS END=154317502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 154317503 . C . PASS END=154317503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:21,0 chr1 154317504 . A . PASS END=154317504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154317505 . A . PASS END=154317505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 154317506 . A . PASS END=154317540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,898:0,62,255:26,0 chr1 154317541 . A . PASS END=154317547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 154317548 . G . PASS END=154317549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:29:0,75,1124:0,77,255:26,0 chr1 154317550 . T . PASS END=154317561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:30:0,85,1111:0,85,255:30,0 chr1 154317562 . T . PASS END=154317562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 154317563 . C . PASS END=154317574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 154317575 . G . PASS END=154317575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 154317576 . A . PASS END=154317580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 154317581 . T . PASS END=154317581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 154317582 . G . PASS END=154317587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 154317588 . C . PASS END=154317593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154317594 . A . PASS END=154317616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 154317617 . C . PASS END=154317617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 154317618 . A . PASS END=154317620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154317621 . A . PASS END=154317630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:25,0 chr1 154317798 . C . PASS END=154317808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,807:0,64,255:26,0 chr1 154317809 . G . PASS END=154317830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1156:0,84,255:33,0 chr1 154317831 . A . PASS END=154317831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1194:0,71,255:31,0 chr1 154317832 . A . PASS END=154317893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:34,0 chr1 154317894 . T . PASS END=154317895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154317896 . C . PASS END=154317899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 154317900 . T . PASS END=154317901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154317902 . G . PASS END=154317907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 154317908 . G . PASS END=154317909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154317910 . G . PASS END=154317911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154317912 . G . PASS END=154317914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 154317915 . G . PASS END=154317986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,983:0,80,255:33,0 chr1 154317987 . T . PASS END=154318021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,894:0,68,255:26,0 chr1 154318276 . A . PASS END=154318287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr1 154318288 . C . PASS END=154318288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:32,0 chr1 154318289 . A . PASS END=154318359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1288:0,81,255:40,0 chr1 154318707 . G . PASS END=154318707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 154318708 . A . PASS END=154318709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 154318710 . G . PASS END=154318734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:24,0 chr1 154318735 . A . PASS END=154318788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:31:0,90,1256:0,92,255:36,0 chr1 154318789 . T . PASS END=154318789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1219:0,69,255:31,0 chr1 154318790 . C . PASS END=154318799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1310:0,92,255:33,0 chr1 154318800 . A . PASS END=154318800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 154318801 . T . PASS END=154318828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1200:0,83,255:33,0 chr1 154318829 . C . PASS END=154318829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 154318830 . A . PASS END=154318838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1066:0,90,255:30,0 chr1 154318839 . A . PASS END=154318839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 154318840 . T . PASS END=154318858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1094:0,85,255:31,0 chr1 154318859 . T . PASS END=154318859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 154318860 . G . PASS END=154318864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 154318865 . C . PASS END=154318865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 154318866 . A . PASS END=154318871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:29,0 chr1 154318872 . G . PASS END=154318877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:29:0,69,1035:0,71,255:25,0 chr1 154318878 . G . PASS END=154318878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:23,0 chr1 154318879 . G . PASS END=154318885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:23,0 chr1 154318886 . G . PASS END=154318887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 154318888 . T . PASS END=154318891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 154318892 . T . PASS END=154318893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:23,0 chr1 154318894 . A . PASS END=154318911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 154318912 . T . PASS END=154318929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 154318930 . T . PASS END=154318930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 154318931 . G . PASS END=154318944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 154318945 . G . PASS END=154318948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 154318949 . G . PASS END=154318949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 154318950 . C . PASS END=154318952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 154319096 . A . PASS END=154319100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,992:0,78,255:26,0 chr1 154319101 . G . PASS END=154319103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 154319104 . C . PASS END=154319105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154319106 . A . PASS END=154319218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,93,255:40,0 chr1 154319219 . C . PASS END=154319234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 154320884 . G . PASS END=154320902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,770:0,62,255:26,0 chr1 154320903 . G . PASS END=154320904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 154320905 . C . PASS END=154320909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1030:0,68,255:27,0 chr1 154320910 . C . PASS END=154320941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1031:0,84,255:36,0 chr1 154320942 . A G, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.248;ReadPosRankSum=2.704;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,20,0:0.526,0.000:38:11,14,0:7,6,0:47:85,0,47,185,185,185:255,0,255:17,0:5.0000e+01,8.7754e-05,4.9899e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,5,9,11:14,4,9,11 chr1 154320943 . G . PASS END=154320949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,101,1449:0,101,255:37,0 chr1 154320950 . G . PASS END=154320950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:36,0 chr1 154320951 . C . PASS END=154320979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1241:0,86,255:37,0 chr1 154320980 . T . PASS END=154321012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1052:0,82,255:33,0 chr1 154321013 . C . PASS END=154321013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 154321014 . G . PASS END=154321014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154321316 . G . PASS END=154321322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154321323 . A . PASS END=154321323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154321324 . C . PASS END=154321324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 154321325 . A . PASS END=154321362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:19,0 chr1 154321363 . C . PASS END=154321399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 154321400 . T . PASS END=154321402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154321403 . G . PASS END=154321456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,809:0,65,255:26,0 chr1 154321457 . A . PASS END=154321457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 154321458 . A . PASS END=154321498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,931:0,69,255:25,0 chr1 154321499 . C . PASS END=154321500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 154321501 . C . PASS END=154321542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,786:0,66,255:22,0 chr1 154321543 . T . PASS END=154321591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr1 154321592 . T . PASS END=154321594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 154378106 . A . PASS END=154378106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 154378107 . T . PASS END=154378107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr1 154378108 . G . PASS END=154378109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,643:0,51,255:17,0 chr1 154378110 . T . PASS END=154378110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 154378111 . G . PASS END=154378120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 154378121 . T . PASS END=154378121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 154378122 . G . PASS END=154378127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr1 154378128 . T . PASS END=154378150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:31:12:0,31,421:0,31,255:13,0 chr1 154378151 . C . PASS END=154378151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 154378152 . C . PASS END=154378169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:12,0 chr1 154378170 . C . PASS END=154378170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 154378171 . A . PASS END=154378186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 154378187 . C . PASS END=154378190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 154381103 . A G, 48.74 PASS DP=50;MQ=250.00;MQRankSum=6.010;ReadPosRankSum=3.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,22,0:0.440,0.000:50:14,13,0:14,9,0:47:84,0,50,784,992,1776:255,0,255:23,0:4.8744e+01,7.9730e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,17,15,7:15,13,16,6 chr1 154401672 . A . PASS END=154401672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 154401673 . G . PASS END=154401678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 154401679 . G A, 50.00 PASS DP=9;MQ=250.00;MQRankSum=1.666;ReadPosRankSum=0.762;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,7,0:0.778,0.000:9:2,5,0:0,2,0:38:85,0,35,250,72,322:244,0,50:2,0:5.0001e+01,7.3937e-04,3.7952e+01,2.5043e+02,1.0630e+02,3.2496e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,5,2:0,2,5,2 chr1 154401680 . A . PASS END=154401682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 154401683 . G . PASS END=154401684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 154401685 . C . PASS END=154401687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154401688 . G . PASS END=154401715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 154401716 . A . PASS END=154401716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 154401717 . C . PASS END=154401723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 154401724 . C . PASS END=154401749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,413:0,36,255:13,0 chr1 154401750 . A . PASS END=154401755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 154401756 . C . PASS END=154401756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 154401757 . T . PASS END=154401757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 154401758 . G . PASS END=154401758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 154401759 . T . PASS END=154401772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,562:0,51,255:19,0 chr1 154401773 . A . PASS END=154401773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:18,0 chr1 154401774 . G . PASS END=154401776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr1 154401777 . A . PASS END=154401777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,582:0,10,255:17,0 chr1 154401778 . G . PASS END=154401778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 154401779 . C . PASS END=154401783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 154401784 . T . PASS END=154401784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr1 154401785 . G . PASS END=154401785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 154401786 . C . PASS END=154401786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 154401787 . A . PASS END=154401790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:23,0 chr1 154401791 . T . PASS END=154401791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:21,0 chr1 154401792 . C . PASS END=154401792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 154401793 . C . PASS END=154401794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 154401795 . A . PASS END=154401799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 154401800 . A . PASS END=154401802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 154401803 . A . PASS END=154401804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:36:23:0,36,690:0,36,255:21,0 chr1 154401805 . A . PASS END=154401805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr1 154401806 . T . PASS END=154401806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:7:23:0,7,664:0,7,255:20,0 chr1 154401807 . G . PASS END=154401809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 154401810 . C . PASS END=154401810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 154401811 . T . PASS END=154401812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 154401813 . G . PASS END=154401813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 154401814 . C . PASS END=154401815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 154401816 . T . PASS END=154401816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:21,0 chr1 154401817 . G . PASS END=154401818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154401819 . G . PASS END=154401819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,748:0,33,255:21,0 chr1 154401820 . A . PASS END=154401820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154401821 . A . PASS END=154401821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 154401822 . G . PASS END=154401823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 154401824 . A . PASS END=154401824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,599:0,33,255:17,0 chr1 154401825 . G . PASS END=154401826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154401827 . C . PASS END=154401832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:20,0 chr1 154401833 . C . PASS END=154401833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,607:0,19,255:18,0 chr1 154401834 . T . PASS END=154401834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154401835 . G . PASS END=154401835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,654:0,49,255:19,0 chr1 154401836 . A . LowGQ END=154401836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,482:4,0,255:16,0 chr1 154401837 . G . PASS END=154401837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154401838 . G . PASS END=154401840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:19,0 chr1 154401841 . G . PASS END=154401843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154401844 . G . PASS END=154401844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,686:0,49,255:19,0 chr1 154401845 . C . PASS END=154401847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154401848 . C . PASS END=154401848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:19,0 chr1 154401849 . T . PASS END=154401863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,62,255:21,0 chr1 154401864 . A . PASS END=154401876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 154401877 . C . PASS END=154401883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 154401884 . G . PASS END=154401888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 154401889 . C . PASS END=154401896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr1 154401897 . G . PASS END=154401899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:14,0 chr1 154401900 . C . PASS END=154401901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:14:0,39,585:0,42,255:13,0 chr1 154401902 . G . PASS END=154401906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154401907 . C . PASS END=154401920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 154402959 . T . PASS END=154402960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 154402961 . C . PASS END=154402961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 154402962 . C . LowGQ END=154402962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:25,0,255:7,0 chr1 154402963 . C . PASS END=154402972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 154402973 . C . PASS END=154402984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr1 154402985 . T . PASS END=154402996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154402997 . A . PASS END=154403033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 154403034 . G . PASS END=154403034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 154403035 . G . PASS END=154403036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 154403037 . G . PASS END=154403057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 154403058 . A . PASS END=154403058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,247:0,10,247:7,0 chr1 154403059 . G . PASS END=154403063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 154403064 . T . PASS END=154403064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr1 154403065 . G . PASS END=154403076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr1 154403077 . G . PASS END=154403079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,233:6,0 chr1 154403080 . G . PASS END=154403080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 154403081 . T . PASS END=154403082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 154406995 . T . PASS END=154407134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1164:0,93,255:40,0 chr1 154407135 . G . PASS END=154407135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 154407136 . C . PASS END=154407139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154407140 . T . PASS END=154407140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 154407141 . T . PASS END=154407155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1023:0,84,255:28,0 chr1 154407156 . C . PASS END=154407176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 154407466 . T . PASS END=154407470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:24,0 chr1 154407471 . C . PASS END=154407471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 154407472 . C . PASS END=154407482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,906:0,72,255:26,0 chr1 154407483 . G . PASS END=154407495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:28,0 chr1 154407496 . T . PASS END=154407496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 154407497 . C . PASS END=154407513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:29,0 chr1 154407514 . A . PASS END=154407514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 154407515 . C . PASS END=154407568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1164:0,83,255:36,0 chr1 154407569 . C . PASS END=154407569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:32,0 chr1 154407570 . T . PASS END=154407582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1164:0,85,255:34,0 chr1 154407583 . T . PASS END=154407583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1124:0,44,255:30,0 chr1 154407584 . T . PASS END=154407586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:31,0 chr1 154407587 . G . PASS END=154407587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 154407588 . C . PASS END=154407591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154407592 . G . PASS END=154407592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 154407593 . A . PASS END=154407593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154407594 . T . PASS END=154407594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:27,0 chr1 154407595 . A . PASS END=154407597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 154407598 . G . PASS END=154407598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1045:0,52,255:27,0 chr1 154407599 . G . PASS END=154407603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154407604 . A . PASS END=154407622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,65,255:26,0 chr1 154407623 . A . PASS END=154407623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:21,0 chr1 154407624 . A . PASS END=154407629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 154407630 . A . PASS END=154407632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 154408445 . G . PASS END=154408447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 154408448 . A . PASS END=154408458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154408459 . G . PASS END=154408469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:17,0 chr1 154408470 . T . PASS END=154408470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 154408471 . C . PASS END=154408494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,698:0,54,255:19,0 chr1 154408495 . G . PASS END=154408501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 154408502 . G . PASS END=154408502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 154408503 . T . PASS END=154408512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 154408513 . T . PASS END=154408513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 154408514 . C . PASS END=154408520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 154408521 . A . PASS END=154408521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr1 154408522 . G . PASS END=154408572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 154408573 . C . PASS END=154408576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154408577 . C . PASS END=154408583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154408584 . C . PASS END=154408586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 154417523 . G . PASS END=154417570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,120,1800:0,130,255:40,0 chr1 154420601 . A . PASS END=154420647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:34:0,90,1395:0,90,255:39,0 chr1 154422387 . G . PASS END=154422456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,99,1485:0,100,255:40,0 chr1 154426549 . G . PASS END=154426647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,102,1475:0,111,255:40,0 chr1 154426964 . T . PASS END=154426965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 154426966 . C . PASS END=154426966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:31,0 chr1 154426967 . A . PASS END=154426969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:34:0,88,1181:0,88,255:33,0 chr1 154426970 . A C, 49.97 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=0.050;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:5,8,0:13,9,0:47:85,0,47,185,185,185:255,0,255:18,0:4.9971e+01,8.7237e-05,5.0000e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,13,6,11:12,6,13,4 chr1 154426971 . T . PASS END=154427007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:35:0,102,1266:0,105,255:40,0 chr1 154427008 . G . PASS END=154427059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:35:0,96,1440:0,101,255:40,0 chr1 154430092 . C T, 49.09 PASS DP=58;MQ=249.29;MQRankSum=6.496;ReadPosRankSum=5.808;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,26,0:0.448,0.000:58:13,14,0:19,12,0:48:84,0,50,930,1144,2074:255,0,255:27,0:4.9087e+01,7.5329e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,13,13,13:16,16,13,13 chr1 154432420 . T C, 47.81 PASS DP=52;MQ=250.00;MQRankSum=6.103;ReadPosRankSum=6.103;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,22,0:0.423,0.000:52:16,12,0:14,10,0:47:83,0,50,750,1073,1823:255,0,255:30,0:4.7814e+01,9.3708e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,15,11,11:19,11,11,11 chr1 154437610 . G . PASS END=154437666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,529:0,48,255:19,0 chr1 154437667 . G . PASS END=154437706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,930:0,62,255:26,0 chr1 154437707 . C . PASS END=154437707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 154437708 . C . PASS END=154437710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 154437711 . C . PASS END=154437713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154437714 . C . PASS END=154437714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 154437715 . A . PASS END=154437726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1027:0,87,255:29,0 chr1 154437727 . T . PASS END=154437727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 154437728 . C . PASS END=154437732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 154437733 . C . PASS END=154437734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 154437735 . C . PASS END=154437739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 154437740 . C . PASS END=154437740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 154437741 . C . PASS END=154437743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154437744 . T . PASS END=154437744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 154437745 . G . PASS END=154437745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 154437746 . T . PASS END=154437746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,854:0,29,255:24,0 chr1 154437747 . C . PASS END=154437757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 154437758 . C . PASS END=154437758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 154437759 . T . PASS END=154437792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,803:0,62,255:26,0 chr1 154437793 . A . PASS END=154437793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 154437794 . G . PASS END=154437798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 154437799 . C . PASS END=154437799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 154437800 . A . PASS END=154437801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 154437802 . G . PASS END=154437803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 154437804 . A . PASS END=154437832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 154437833 . A . PASS END=154437856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:19,0 chr1 154442817 . T . PASS END=154442838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,170,255:40,0 chr1 154456625 . T . PASS END=154456785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:28:0,81,996:0,84,255:40,0 chr1 154456786 . T . PASS END=154456798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:29:0,66,990:0,87,255:25,0 chr1 154456799 . T . PASS END=154456799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,901:0,54,255:21,0 chr1 154456800 . C . PASS END=154456802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:22,0 chr1 154456803 . T . PASS END=154456803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:19,0 chr1 154456804 . G . PASS END=154456806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 154456807 . T . PASS END=154456808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:24:0,57,855:0,72,255:19,0 chr1 154456809 . G . PASS END=154456809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 154456810 . T . PASS END=154456810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 154456811 . C . PASS END=154456811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 154458415 . T . PASS END=154458523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1210:0,86,255:40,0 chr1 154458524 . G . PASS END=154458535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:25,0 chr1 154458536 . C . PASS END=154458538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,837:0,56,255:19,0 chr1 154459003 . G . PASS END=154459010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 154459011 . C . PASS END=154459030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:19,0 chr1 154459031 . C . PASS END=154459031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:18,0 chr1 154459032 . C . PASS END=154459040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 154459041 . T . PASS END=154459041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr1 154459042 . C . PASS END=154459051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 154459052 . G . PASS END=154459052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 154459053 . G . PASS END=154459072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:24:0,68,796:0,68,255:26,0 chr1 154459073 . G . PASS END=154459078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 154459079 . T . PASS END=154459128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr1 154459129 . A . PASS END=154459159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 154461527 . C . PASS END=154461535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:26,0 chr1 154461536 . C . PASS END=154461626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1063:0,81,255:40,0 chr1 154461627 . C . PASS END=154461627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:35,0 chr1 154461628 . C . PASS END=154461628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 154461629 . G . PASS END=154461629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:34,0 chr1 154461630 . C . PASS END=154461639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1327:0,84,255:37,0 chr1 154461640 . T . PASS END=154461640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1330:0,68,255:33,0 chr1 154461641 . C . PASS END=154461656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1360:0,81,255:36,0 chr1 154461657 . T . PASS END=154461658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:75:36:0,75,1231:0,75,255:31,0 chr1 154461659 . C . PASS END=154461697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:31:0,80,1260:0,80,255:34,0 chr1 154461698 . T . PASS END=154461698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 154461699 . C . PASS END=154461700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154461701 . C . PASS END=154461701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 154461702 . C . PASS END=154461725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1164:0,87,255:31,0 chr1 154461726 . T . PASS END=154461726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 154461727 . T . PASS END=154461806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1096:0,90,255:40,0 chr1 154461807 . A . PASS END=154461814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154461815 . A . PASS END=154461818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 154461819 . C . PASS END=154461827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 154461828 . A . PASS END=154461828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:24,0 chr1 154461829 . A . PASS END=154461832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr1 154468095 . T . PASS END=154468165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:57:0,120,1800:0,122,255:40,0 chr1 154468166 . T . PASS END=154468194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:93:53:0,93,1395:0,159,255:40,0 chr1 154468195 . G . PASS END=154468198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:69:53:0,69,1035:0,143,255:25,0 chr1 154471588 . C . PASS END=154471595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 154471596 . A . PASS END=154471596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,872:0,50,255:26,0 chr1 154471597 . T . PASS END=154471696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,918:0,81,255:40,0 chr1 154471697 . G . PASS END=154471698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 154471699 . C . PASS END=154471702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 154471703 . T . PASS END=154471712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1092:0,74,255:26,0 chr1 154471713 . A . PASS END=154471713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:25,0 chr1 154471714 . C . PASS END=154471714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 154473912 . C . PASS END=154473941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,662:0,54,255:19,0 chr1 154473942 . G . PASS END=154473961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:23,0 chr1 154473962 . A . PASS END=154473962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 154473963 . G . PASS END=154473978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,839:0,69,255:23,0 chr1 154473979 . G . PASS END=154473979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 154473980 . C . PASS END=154473996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:24,0 chr1 154473997 . G . PASS END=154474026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 154474027 . C . PASS END=154474027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr1 154474028 . T . PASS END=154474036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:17,0 chr1 154474037 . T . PASS END=154474037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 154474038 . C . PASS END=154474056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,630:0,40,255:18,0 chr1 154474057 . T . PASS END=154474057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,580:0,37,255:15,0 chr1 154474058 . T . PASS END=154474064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 154474065 . C . PASS END=154474065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 154474066 . C . PASS END=154474066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 154474067 . T . PASS END=154474068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 154474069 . T . PASS END=154474069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,449:0,15,255:13,0 chr1 154474070 . T . PASS END=154474074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 154474075 . T . PASS END=154474083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 154474084 . C . PASS END=154474084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 154474085 . A . PASS END=154474093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 154474094 . T . PASS END=154474094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 154474095 . C . PASS END=154474096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 154474097 . T . PASS END=154474100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 154474101 . T . PASS END=154474101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,441:0,3,255:13,0 chr1 154474102 . G . PASS END=154474104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 154474105 . C . PASS END=154474113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:15:0,34,537:0,34,255:14,0 chr1 154474114 . G . PASS END=154474115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154474116 . C . PASS END=154474130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 154474131 . C G, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.165;ReadPosRankSum=0.471;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,8,0:0.571,0.000:14:4,4,0:2,4,0:48:85,0,49,252,210,462:246,0,168:5,0:5.0000e+01,6.7822e-05,5.2489e+01,2.5181e+02,2.4503e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,2,6:3,3,6,2 chr1 154474132 . C . PASS END=154474135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 154474136 . A . PASS END=154474158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 154474159 . G . PASS END=154474165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 154474166 . G . PASS END=154474168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154474169 . T . PASS END=154474173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154474174 . C . PASS END=154474192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 154474193 . A . PASS END=154474193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,324:0,3,255:9,0 chr1 154474194 . C . PASS END=154474194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 154474195 . A . PASS END=154474195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr1 154474196 . G . PASS END=154474203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:11,0 chr1 154474204 . T . PASS END=154474208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 154474209 . G . PASS END=154474209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 154474210 . G . PASS END=154474217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,327:0,27,255:9,0 chr1 154474218 . G . PASS END=154474218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 154474219 . C . PASS END=154474220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 154474221 . G . PASS END=154474221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 154474222 . G . PASS END=154474225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 154474226 . T . LowGQ END=154474226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:7,0 chr1 154474227 . G . PASS END=154474227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 154474228 . C . PASS END=154474229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 154474230 . G . LowGQ END=154474230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,263:17,0,255:8,0 chr1 154474231 . C . PASS END=154474231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 154474232 . T . PASS END=154474232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 154474233 . C . PASS END=154474237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 154474238 . G . LowGQ END=154474238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:10,0 chr1 154474239 . C . PASS END=154474241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 154474242 . G . LowGQ END=154474242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 154474243 . G . PASS END=154474245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 154474246 . G . PASS END=154474246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 154474247 . C . PASS END=154474248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 154474249 . G . PASS END=154474249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 154474250 . A . PASS END=154474256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 154474257 . G . PASS END=154474257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 154474258 . C . PASS END=154474273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 154474274 . C . PASS END=154474276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 154474277 . G . PASS END=154474279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 154474280 . C . PASS END=154474280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 154474281 . A . PASS END=154474284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 154474285 . C . PASS END=154474285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 154474286 . C . PASS END=154474288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 154474289 . C . PASS END=154474289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 154474290 . C . PASS END=154474290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 154474291 . G . PASS END=154474291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 154474292 . C . PASS END=154474293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 154474294 . T . PASS END=154474294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 154474295 . C . PASS END=154474295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 154474296 . C . PASS END=154474296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 154474297 . G . PASS END=154474300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 154474301 . T . PASS END=154474302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 154474303 . T . PASS END=154474303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 154474304 . T . PASS END=154474304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 154474305 . G . PASS END=154474305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,343:0,5,255:11,0 chr1 154474306 . C . PASS END=154474306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 154474307 . G . PASS END=154474319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 154474320 . G . PASS END=154474320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 154474321 . C . PASS END=154474322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 154474323 . G . PASS END=154474323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 154474324 . C . PASS END=154474329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 154474330 . G . PASS END=154474365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,612:0,45,255:19,0 chr1 154474366 . G . PASS END=154474369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 154474370 . A . PASS END=154474372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 154474373 . C . PASS END=154474448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,679:0,63,255:26,0 chr1 154474449 . C . PASS END=154474449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 154474450 . G . PASS END=154474491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,914:0,72,255:25,0 chr1 154474492 . G . PASS END=154474497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:18,0 chr1 154474498 . T . PASS END=154474502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:33:22:0,33,495:0,66,255:13,0 chr1 154479380 . A . PASS END=154479381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr1 154479694 . A . PASS END=154479708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,185,255:40,0 chr1 154479709 . T . PASS END=154479796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,140,255:40,0 chr1 154480899 . G . PASS END=154480957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:97:0,120,1800:0,255,255:40,0 chr1 154482272 . G . PASS END=154482327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,85,255:39,0 chr1 154482328 . C . PASS END=154482331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 154482332 . C . PASS END=154482332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 154482333 . A . PASS END=154482346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 154492780 . G . PASS END=154492850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,162,255:40,0 chr1 154493799 . C . PASS END=154493926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,944:0,87,255:40,0 chr1 154493927 . A . PASS END=154493949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 154493950 . C . PASS END=154493955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 154505263 . G . PASS END=154505263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 154505264 . G . PASS END=154505269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 154505270 . C T, 50.00 PASS DP=9;MQ=250.00;MQRankSum=1.666;ReadPosRankSum=0.067;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,7,0:0.778,0.000:9:1,6,0:1,1,0:45:85,0,44,242,71,314:236,0,50:2,0:5.0000e+01,1.3823e-04,4.6614e+01,2.4232e+02,1.0624e+02,3.1679e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,1,6,1:2,0,5,2 chr1 154505271 . G . PASS END=154505288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr1 154505289 . C . PASS END=154505293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 154505294 . T . PASS END=154505296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154505297 . G . PASS END=154505306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr1 154505307 . C . PASS END=154505307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 154505308 . A . PASS END=154505321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 154505322 . G . PASS END=154505327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 154505328 . A . PASS END=154505328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 154505329 . A . PASS END=154505348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 154505349 . T . PASS END=154505350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 154505351 . A . PASS END=154505364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,553:0,45,255:17,0 chr1 154505395 . A . PASS END=154505414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr1 154505415 . G . PASS END=154505415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 154505416 . A . PASS END=154505422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 154505423 . T . PASS END=154505423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:14,0 chr1 154505424 . G . PASS END=154505445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 154505446 . A . PASS END=154505448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 154505449 . C . PASS END=154505450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 154505451 . C . PASS END=154505456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,32,255:10,0 chr1 154505457 . T . PASS END=154505488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 154505489 . G . PASS END=154505489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 154505583 . A . PASS END=154505587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,821:0,69,255:23,0 chr1 154505588 . A . PASS END=154505588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 154505589 . T . PASS END=154505610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr1 154505611 . T . PASS END=154505611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:24,0 chr1 154505612 . T . PASS END=154505619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,891:0,75,255:25,0 chr1 154505620 . C . PASS END=154505635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 154505636 . A . PASS END=154505636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 154505637 . T . PASS END=154505640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 154505641 . G . PASS END=154505643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154505644 . A . PASS END=154505654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 154505655 . C . PASS END=154505666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 154505667 . A . PASS END=154505683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,929:0,62,255:26,0 chr1 154505684 . A . PASS END=154505684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 154505685 . T . PASS END=154505695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 154505696 . T . PASS END=154505696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 154505697 . T . PASS END=154505703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 154505704 . C T, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=1.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,13,0:0.591,0.000:22:2,6,0:7,7,0:48:85,0,48,465,285,750:255,0,253:8,0:5.0000e+01,7.6105e-05,5.1223e+01,4.5000e+02,3.1999e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,4,9:7,2,7,6 chr1 154505705 . G . PASS END=154505705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154505706 . T . PASS END=154505710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:17,0 chr1 154506954 . C . PASS END=154506954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154506955 . C . PASS END=154507063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1139:0,80,255:40,0 chr1 154507064 . A . PASS END=154507064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 154507065 . C . PASS END=154507070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 154507071 . T . PASS END=154507080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:27:0,66,978:0,67,255:26,0 chr1 154512706 . A . PASS END=154512708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:33,0 chr1 154514500 . G . PASS END=154514542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1135:0,82,255:32,0 chr1 154515207 . C . PASS END=154515297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1256:0,81,255:40,0 chr1 154516439 . A . PASS END=154516439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 154516440 . G . PASS END=154516446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 154516447 . T . PASS END=154516449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 154516450 . T . PASS END=154516450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154516451 . G . PASS END=154516451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 154516452 . G . PASS END=154516454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154516455 . C . PASS END=154516455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 154516456 . T . PASS END=154516459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 154516460 . C . PASS END=154516460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 154516461 . C . PASS END=154516467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr1 154516468 . A . PASS END=154516468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 154516469 . A . PASS END=154516473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:19,0 chr1 154516474 . T . PASS END=154516476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 154516477 . G A, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=2.324;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,12,0:0.632,0.000:19:5,4,0:2,8,0:47:85,0,47,421,250,672:255,0,189:7,0:5.0000e+01,8.5683e-05,5.0111e+01,4.2123e+02,2.8509e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,6,6:2,5,8,4 chr1 154516478 . A . PASS END=154516480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 154516481 . C . PASS END=154516481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 154516482 . C . PASS END=154516482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 154516483 . T . PASS END=154516483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:19,0 chr1 154516484 . G . PASS END=154516485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 154516486 . G . PASS END=154516488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154516489 . G . PASS END=154516490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154516491 . C . PASS END=154516491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:19,0 chr1 154516492 . T . PASS END=154516495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 154516496 . A . PASS END=154516496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:20,0 chr1 154516497 . C . PASS END=154516500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 154516501 . T . PASS END=154516502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 154516503 . C . PASS END=154516504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154516505 . T . PASS END=154516505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 154516506 . A . PASS END=154516514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 154516515 . G . PASS END=154516518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154516519 . A . PASS END=154516519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:19,0 chr1 154516520 . G . PASS END=154516520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 154516521 . G . PASS END=154516521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154516522 . C . PASS END=154516522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 154516523 . G . PASS END=154516525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 154516526 . G . PASS END=154516533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:18,0 chr1 154516534 . T . PASS END=154516553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,653:0,44,255:19,0 chr1 154516554 . A . PASS END=154516554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 154516555 . C . PASS END=154516570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 154516571 . T C, 95.15 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,8,0:0,8,0:45:133,48,0,612,48,612:255,48,0:0,0:9.5153e+01,4.5153e+01,1.3254e-04,4.5000e+02,7.9923e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,9:0,0,11,5 chr1 154516572 . A . PASS END=154516583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 154516584 . G . PASS END=154516586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 154516848 . G . PASS END=154516848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154516849 . C . PASS END=154516849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 154516850 . T . PASS END=154516869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 154516870 . C . PASS END=154516870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 154516871 . T . PASS END=154516871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154516872 . C . PASS END=154516872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 154516873 . T . PASS END=154516873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154516874 . G . PASS END=154516876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154516877 . T . PASS END=154516877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 154516878 . A . PASS END=154516894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr1 154516895 . G . PASS END=154516895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 154516896 . G . PASS END=154516909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 154516910 . C . PASS END=154516910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 154516911 . T . PASS END=154516921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 154516922 . C . PASS END=154516952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,770:0,63,255:26,0 chr1 154516953 . G . PASS END=154516971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:18,0 chr1 154516972 . A . PASS END=154516972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 154516973 . T . PASS END=154516974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154516975 . A . PASS END=154516977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154516978 . G . PASS END=154516978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154516979 . A . PASS END=154516979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 154516980 . C . PASS END=154516993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 154517271 . G . PASS END=154517271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 154517272 . T . PASS END=154517277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 154517278 . G . PASS END=154517359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1019:0,87,255:37,0 chr1 154517360 . G . PASS END=154517407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,900:0,61,255:25,0 chr1 154517408 . C . PASS END=154517408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 154517409 . A . PASS END=154517415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:21,0 chr1 154517416 . C . PASS END=154517425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,654:0,46,255:18,0 chr1 154519885 . A . PASS END=154520033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:36:0,108,1333:0,108,255:40,0 chr1 154520154 . T . PASS END=154520186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,152,255:40,0 chr1 154522914 . T . PASS END=154522945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,170,255:40,0 chr1 154523414 . C . PASS END=154523479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1197:0,89,255:37,0 chr1 154523480 . A . PASS END=154523480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1156:0,58,255:27,0 chr1 154523873 . T . PASS END=154523925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1097:0,90,255:36,0 chr1 154523926 . T . PASS END=154523926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:32,0 chr1 154523927 . C . PASS END=154523938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1164:0,83,255:32,0 chr1 154523939 . T . PASS END=154523939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:29,0 chr1 154523940 . G . PASS END=154523956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 154523957 . A . PASS END=154523968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 154524247 . C . PASS END=154524291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1083:0,89,255:36,0 chr1 154524292 . A . PASS END=154524292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr1 154524293 . T . PASS END=154524295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1319:0,97,255:33,0 chr1 154524397 . C . PASS END=154524444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:90:42:0,90,1331:0,90,255:40,0 chr1 154524445 . G . PASS END=154524445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1427:0,71,255:37,0 chr1 154524446 . G . PASS END=154524455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:41:0,84,1393:0,84,255:38,0 chr1 154524569 . T . PASS END=154524659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,115,1418:0,115,255:40,0 chr1 154524880 . T . PASS END=154524935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,107,1800:0,107,255:40,0 chr1 154524936 . G . PASS END=154524940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,159,255:40,0 chr1 154525212 . C . PASS END=154525213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 154525214 . C . PASS END=154525214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 154525215 . C . PASS END=154525215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 154525216 . T . PASS END=154525217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:29,0 chr1 154525218 . T . PASS END=154525284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1255:0,89,255:35,0 chr1 154525285 . A . PASS END=154525296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1056:0,76,255:26,0 chr1 154525508 . A . PASS END=154525648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,114,1710:0,118,255:40,0 chr1 154527211 . C . PASS END=154527261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,105,1566:0,105,255:40,0 chr1 154527904 . C . PASS END=154528008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:42:0,96,1440:0,96,255:40,0 chr1 154528336 . C . PASS END=154528440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:31:0,86,1141:0,86,255:40,0 chr1 154530703 . C . PASS END=154530756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:19,0 chr1 154530757 . G . PASS END=154530760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 154530761 . T . PASS END=154530764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154530765 . G . PASS END=154530765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154530766 . T . PASS END=154530827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,527:0,45,255:19,0 chr1 154530828 . C . PASS END=154530828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 154530829 . G . PASS END=154530830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154530831 . C . PASS END=154530843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 154530844 . G . PASS END=154530844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 154530845 . G . PASS END=154530845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 154530846 . C . PASS END=154530846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 154530847 . A . PASS END=154530849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 154530850 . G . PASS END=154530852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 154530853 . G . PASS END=154530854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 154530855 . A . PASS END=154530855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 154530856 . G . PASS END=154530868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 154530869 . C . PASS END=154530890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:8:0,21,315:0,24,255:9,0 chr1 154530891 . G . LowGQ END=154530891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,218:7,0,225:7,0 chr1 154530892 . C . PASS END=154530892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 154530893 . T . PASS END=154530893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 154530894 . T . PASS END=154530896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 154530897 . G . PASS END=154530897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 154530898 . C . PASS END=154530898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 154530899 . T . PASS END=154530899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,202:0,7,202:7,0 chr1 154530900 . C . PASS END=154530910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 154530911 . C . PASS END=154530938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,164:0,15,164:6,0 chr1 154530939 . G . PASS END=154530939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 154530940 . G . PASS END=154530950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 154530951 . C . PASS END=154530951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:3,0 chr1 154530952 . C . PASS END=154530955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr1 154530956 . G . LowGQ END=154530966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,100:0,0,104:3,0 chr1 154530967 . C . PASS END=154530991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 154530992 . C . PASS END=154531029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:3:0,3,45:0,9,94:3,0 chr1 154540225 . G . PASS END=154540225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 154540521 . A . PASS END=154540526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1235:0,102,255:36,0 chr1 154540527 . C . PASS END=154540527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:35,0 chr1 154540528 . G . PASS END=154540584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:36:0,81,1319:0,81,255:38,0 chr1 154540590 . G . PASS END=154540590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 154541935 . C . PASS END=154541935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 154541938 . G . PASS END=154542081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:30:0,87,1109:0,90,255:40,0 chr1 154542082 . T . PASS END=154542082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:41:0,75,1125:0,123,255:25,0 chr1 154542083 . G . PASS END=154542083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 154542249 . C . PASS END=154542319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,116,1572:0,116,255:40,0 chr1 154542734 . G . PASS END=154542744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,101,1396:0,101,255:40,0 chr1 154542745 . T . PASS END=154542745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1355:0,73,255:37,0 chr1 154542746 . T . PASS END=154542822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1260:0,84,255:40,0 chr1 154542823 . A . PASS END=154542833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1035:0,92,255:25,0 chr1 154542834 . T . PASS END=154542843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:26:0,48,720:0,78,255:18,0 chr1 154543665 . T . PASS END=154543675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr1 154543676 . T . PASS END=154543687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,988:0,81,255:31,0 chr1 154543688 . C . PASS END=154543688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 154543689 . C . PASS END=154543707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1233:0,89,255:34,0 chr1 154543708 . G . PASS END=154543709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1260:0,72,255:32,0 chr1 154543710 . C . PASS END=154543867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,90,255:40,0 chr1 154543868 . A . PASS END=154543868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 154543869 . G . PASS END=154543874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 154543875 . C . PASS END=154543876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154543877 . G . PASS END=154543879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 154543880 . T . PASS END=154543880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 154543881 . G . PASS END=154543881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154543882 . G . PASS END=154543916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 154543917 . G . PASS END=154543917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 154543918 . G . PASS END=154543950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,800:0,66,255:25,0 chr1 154543951 . G . PASS END=154543951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 154543952 . A . PASS END=154543963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr1 154543964 . T . PASS END=154543964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 154543965 . G . PASS END=154543971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 154543972 . A . PASS END=154543972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 154543973 . C . PASS END=154543988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 154543989 . T . PASS END=154543989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 154543990 . C . PASS END=154543990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 154543991 . G . PASS END=154543991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 154543992 . C . PASS END=154543993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 154543994 . G . PASS END=154543994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 154543995 . C . PASS END=154543995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 154543996 . A . PASS END=154543996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 154543997 . A . PASS END=154543998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 154543999 . C . PASS END=154544000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 154544001 . G . PASS END=154544009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,908:0,61,255:23,0 chr1 154544010 . C . PASS END=154544010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 154544011 . A . PASS END=154544012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 154544013 . C . PASS END=154544013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,756:0,33,255:22,0 chr1 154544014 . A . PASS END=154544014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 154544015 . T . PASS END=154544016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154544017 . A . PASS END=154544017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 154544018 . A . PASS END=154544018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr1 154544019 . C . PASS END=154544020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 154544021 . T . PASS END=154544021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 154544022 . C . PASS END=154544023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 154544024 . T . PASS END=154544024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,782:0,28,255:23,0 chr1 154544025 . C . PASS END=154544039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,870:0,61,255:26,0 chr1 154544040 . C . PASS END=154544040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:23,0 chr1 154544041 . A . PASS END=154544045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:25,0 chr1 154544046 . C . PASS END=154544046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,938:0,37,255:24,0 chr1 154544047 . T . PASS END=154544047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 154544048 . C . PASS END=154544048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:24,0 chr1 154544049 . G . PASS END=154544087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,925:0,64,255:25,0 chr1 154544088 . C . PASS END=154544088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 154544089 . G . PASS END=154544097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr1 154544098 . A . PASS END=154544098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 154544099 . C . PASS END=154544122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,68,255:25,0 chr1 154544123 . C . PASS END=154544123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr1 154544124 . G . PASS END=154544141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 154544142 . G . PASS END=154544223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,590:0,44,255:19,0 chr1 154544224 . A . PASS END=154544224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 154544225 . C . PASS END=154544266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,558:0,45,255:17,0 chr1 154544267 . A . PASS END=154544267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 154544268 . C . PASS END=154544281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,552:0,48,255:16,0 chr1 154544282 . C . PASS END=154544284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 154544285 . A . PASS END=154544297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:15,0 chr1 154544298 . C . PASS END=154544300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154544301 . G . PASS END=154544304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154544305 . A . PASS END=154544305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:13,0 chr1 154544306 . A . PASS END=154544323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 154544324 . A . PASS END=154544324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr1 154544325 . G . PASS END=154544359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:12,0 chr1 154544360 . A . PASS END=154544360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 154544361 . T . PASS END=154544362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 154544363 . A . PASS END=154544363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 154544364 . T . PASS END=154544364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 154544365 . T . PASS END=154544365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 154544366 . G . PASS END=154544389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr1 154544390 . G . PASS END=154544406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 154544407 . C . PASS END=154544407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 154544408 . G . PASS END=154544424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 154544425 . C . PASS END=154544425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154544426 . T . PASS END=154544427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 154544428 . T . PASS END=154544437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,488:0,39,255:13,0 chr1 154544438 . A . PASS END=154544438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 154544439 . A . PASS END=154544441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 154544442 . C . PASS END=154544482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 154544483 . C . PASS END=154544484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 154544485 . G . PASS END=154544493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154544494 . T . PASS END=154544496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154544497 . G . PASS END=154544497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154544498 . C . PASS END=154544510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 154544511 . G . PASS END=154544523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 154544524 . C . PASS END=154544529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 154544530 . G . PASS END=154544533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154544534 . G . PASS END=154544535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 154544536 . C . PASS END=154544536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 154544537 . C . PASS END=154544537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 154544538 . C . PASS END=154544538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,790:0,20,255:20,0 chr1 154544539 . G . PASS END=154544553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,869:0,69,255:26,0 chr1 154544554 . C . PASS END=154544572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 154544573 . G . PASS END=154544573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr1 154544574 . G . PASS END=154544613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1023:0,81,255:32,0 chr1 154544614 . C . PASS END=154544623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 154544624 . A . PASS END=154544624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 154544625 . C . PASS END=154544631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154544632 . C . PASS END=154544637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:24,0 chr1 154544640 . G . PASS END=154544640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 154548237 . G . PASS END=154548408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:42:0,117,1645:0,119,255:40,1 chr1 154548721 . T C, 140.30 PASS DP=31;MQ=249.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:90:178,93,0,1186,93,1186:255,93,0:0,0:1.4030e+02,9.0295e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,14:0,0,11,20 chr1 154548880 . G . PASS END=154548880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 154549124 . G . PASS END=154549128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 154549129 . A . PASS END=154549129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154549130 . G . PASS END=154549146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:29,0 chr1 154549147 . T . PASS END=154549147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:26,0 chr1 154549148 . G . PASS END=154549167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,74,255:26,0 chr1 154549168 . A . PASS END=154549169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 154549170 . T . PASS END=154549175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 154554554 . G . PASS END=154554554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 154554646 . C . PASS END=154554646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154554696 . G . PASS END=154554696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 154554951 . A AGGGGCATG, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,5,0:0,7,0:33:115,36,0,540,36,540:255,0,41:0,12:8.3124e+01,3.3124e+01,2.1167e-03,4.5000e+02,6.7894e+01,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,7,5:0,0,8,4 chr1 154554965 . G . LowGQ END=154554966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,418:32,0,255:13,0 chr1 154555129 . A . PASS END=154555129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154555148 . A . PASS END=154555148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 154555363 . A . PASS END=154555363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 154555411 . T . PASS END=154555411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 154555481 . T . PASS END=154555481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 154555531 . A . PASS END=154555531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 154555554 . G . PASS END=154555554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 154555570 . G . PASS END=154555570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 154555716 . A . PASS END=154555716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 154555828 . G . PASS END=154555828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 154555876 . T . PASS END=154555876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154555938 . C . PASS END=154555938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 154555946 . T . PASS END=154555946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 154555960 . T . PASS END=154555960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154556061 . G . PASS END=154556061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 154556090 . G . PASS END=154556090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 154556178 . A . PASS END=154556178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1073:0,82,255:30,0 chr1 154556246 . G . PASS END=154556246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 154556293 . G . PASS END=154556293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 154556397 . C . PASS END=154556398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154556457 . C . PASS END=154556457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:24,0 chr1 154556470 . G . PASS END=154556470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154556533 . C . PASS END=154556533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 154556568 . C . PASS END=154556568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154556670 . T . PASS END=154556670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 154556692 . C . PASS END=154556692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 154556755 . T . PASS END=154556755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154556762 . C . PASS END=154556762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 154556803 . A . PASS END=154556803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154556814 . C . PASS END=154556814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154556921 . G . PASS END=154556921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 154556959 . C . PASS END=154556959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 154556962 . A . PASS END=154556962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 154556965 . A . PASS END=154556965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 154556981 . G . PASS END=154556981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1341:0,84,255:34,0 chr1 154557076 . A . PASS END=154557076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 154557171 . G . PASS END=154557171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:63:0,111,2077:0,111,255:40,3 chr1 154557222 . C . PASS END=154557222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr1 154557282 . C . PASS END=154557519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:39:0,96,1424:0,96,255:40,2 chr1 154557693 . C . PASS END=154557722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:38:0,96,1415:0,96,255:40,0 chr1 154557723 . A . PASS END=154557809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1215:0,98,255:40,0 chr1 154557810 . A . PASS END=154557810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 154557811 . C . PASS END=154557820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 154558229 . C . PASS END=154558341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:32:0,86,1173:0,86,255:40,0 chr1 154558657 . C . PASS END=154558657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 154558658 . C . PASS END=154558658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 154558659 . A . PASS END=154558660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154558661 . T . PASS END=154558661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 154558662 . G . PASS END=154558669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 154558670 . T . PASS END=154558671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 154558672 . T . PASS END=154558686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr1 154558687 . G . PASS END=154558687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:25,0 chr1 154558688 . C . PASS END=154558688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154558689 . A . PASS END=154558689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 154558690 . G . PASS END=154558695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 154558696 . G . PASS END=154558696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154558697 . G . PASS END=154558705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 154558706 . T . PASS END=154558706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 154558707 . G . PASS END=154558798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:31:0,84,1260:0,92,255:40,0 chr1 154558799 . A . PASS END=154558799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr1 154558800 . G . PASS END=154558803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 154558804 . C . PASS END=154558804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1080:0,66,255:27,0 chr1 154558805 . A . PASS END=154558808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 154558809 . T . PASS END=154558839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 154558842 . G . PASS END=154558842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154559296 . T . PASS END=154559301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 154559302 . G . PASS END=154559318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:18,0 chr1 154559319 . T . PASS END=154559319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 154559320 . G . PASS END=154559326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,647:0,54,255:19,0 chr1 154559327 . G . PASS END=154559339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,587:0,60,255:24,0 chr1 154559340 . G . PASS END=154559340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 154559341 . G . PASS END=154559363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,894:0,72,255:25,0 chr1 154559364 . A . PASS END=154559366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 154559367 . C . PASS END=154559370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154559371 . G . PASS END=154559371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 154559372 . T . PASS END=154559375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 154559376 . C . PASS END=154559412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 154559413 . A . PASS END=154559417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 154560601 . C . PASS END=154560601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 154560602 . G . PASS END=154560602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:30,0 chr1 154560603 . T . PASS END=154560611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1097:0,93,255:32,0 chr1 154560612 . T . PASS END=154560612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1040:0,79,255:31,0 chr1 154560613 . T . PASS END=154560723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1155:0,80,255:40,0 chr1 154560724 . A . PASS END=154560726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:32:0,78,1170:0,96,255:26,0 chr1 154560727 . G . PASS END=154560729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 154560730 . C . PASS END=154560734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:25,0 chr1 154561027 . C . PASS END=154561149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,120,1800:0,123,255:40,0 chr1 154561156 . A . PASS END=154561156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 154561835 . C . PASS END=154561835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 154561845 . C . PASS END=154561939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:40:0,93,1395:0,120,255:40,0 chr1 154562227 . A . PASS END=154562227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 154562233 . C . PASS END=154562235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 154562236 . T . PASS END=154562267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,61,255:26,0 chr1 154562268 . G . PASS END=154562270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154562271 . T . PASS END=154562271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,946:0,70,255:26,0 chr1 154562272 . C . PASS END=154562283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:29,0 chr1 154562284 . T . PASS END=154562284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 154562285 . G . PASS END=154562285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154562286 . A . PASS END=154562287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1008:0,60,255:28,0 chr1 154562288 . G . PASS END=154562297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1133:0,80,255:30,0 chr1 154562298 . A . PASS END=154562299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,996:0,65,255:29,0 chr1 154562300 . C . PASS END=154562300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:27,0 chr1 154562301 . T . PASS END=154562301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:27,0 chr1 154562302 . T . PASS END=154562306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:28,0 chr1 154562307 . C . PASS END=154562307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 154562308 . C . PASS END=154562310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 154562311 . G . PASS END=154562311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 154562312 . C . PASS END=154562313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154562314 . A . PASS END=154562314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 154562315 . G . PASS END=154562315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:30,0 chr1 154562316 . G . PASS END=154562316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 154562317 . A . PASS END=154562328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:30,0 chr1 154562329 . T . PASS END=154562329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 154562330 . G . PASS END=154562330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154562331 . T . PASS END=154562332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 154562333 . A . PASS END=154562333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 154562334 . G . PASS END=154562334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 154562335 . T . PASS END=154562336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 154562337 . A . PASS END=154562337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,892:0,40,255:25,0 chr1 154562338 . G . PASS END=154562338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154562339 . A . PASS END=154562339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:27,0 chr1 154562340 . G . PASS END=154562344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1073:0,93,255:31,0 chr1 154562345 . G . PASS END=154562345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 154562346 . A . PASS END=154562348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 154562349 . C . PASS END=154562349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 154562350 . A . PASS END=154562353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 154562354 . G . PASS END=154562377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1023:0,71,255:26,0 chr1 154562378 . A . PASS END=154562378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:22,0 chr1 154562379 . T . PASS END=154562396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:24,0 chr1 154562397 . A . PASS END=154562397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:20,0 chr1 154562398 . G . PASS END=154562404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr1 154562660 . T . LowGQ END=154562660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,5:24:0:24:0,0,476:114,0,255:17,0 chr1 154562661 . G . PASS END=154562661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,972:0,51,255:25,0 chr1 154562662 . T . LowGQ END=154562662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,764:49,0,255:24,0 chr1 154562663 . C . PASS END=154562663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,986:0,43,255:25,0 chr1 154562664 . T . LowGQ END=154562664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,762:65,0,255:24,0 chr1 154562665 . T . PASS END=154562666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:32:29:0,32,862:0,32,255:25,0 chr1 154562667 . G . PASS END=154562668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:25,0 chr1 154562669 . C . LowGQ END=154562670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:28:0,0,781:10,0,255:24,0 chr1 154562671 . G . PASS END=154562671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr1 154562672 . T . LowGQ END=154562672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,842:4,0,255:24,0 chr1 154562673 . G . PASS END=154562673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,861:0,23,255:25,0 chr1 154562674 . C . PASS END=154562674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1023:0,35,255:30,0 chr1 154562675 . T . PASS END=154562675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:19:33:0,19,977:0,19,255:28,0 chr1 154562676 . T . PASS END=154562676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1091:0,39,255:31,0 chr1 154562677 . C . PASS END=154562677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:32,0 chr1 154562678 . T . PASS END=154562678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1172:0,85,255:33,0 chr1 154562679 . G . PASS END=154562679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:32,0 chr1 154562680 . G . PASS END=154562680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1141:0,50,255:33,0 chr1 154562681 . G . PASS END=154562682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:34,0 chr1 154562683 . A . PASS END=154562683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1096:0,58,255:33,0 chr1 154562684 . C . PASS END=154562684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1250:0,91,255:34,0 chr1 154562685 . C . PASS END=154562685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:35,0 chr1 154562686 . T . PASS END=154562686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:28:36:0,28,1054:0,28,255:32,0 chr1 154562687 . T . PASS END=154562687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1199:0,91,255:35,0 chr1 154562688 . G . PASS END=154562689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:34,0 chr1 154562690 . G . PASS END=154562690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:34,0 chr1 154562691 . A . PASS END=154562691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:34,0 chr1 154562692 . G . PASS END=154562696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1302:0,92,255:37,0 chr1 154562697 . A . PASS END=154562697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:37,0 chr1 154562698 . G . PASS END=154562699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 154562700 . A . PASS END=154562700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1324:0,59,255:36,0 chr1 154562701 . T . PASS END=154562702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1307:0,97,255:37,0 chr1 154562703 . G . PASS END=154562703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 154562704 . T . PASS END=154562711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:38:0,87,1490:0,87,255:40,0 chr1 154562712 . A . PASS END=154562712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:38,0 chr1 154562713 . G . PASS END=154562738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:41:0,96,1504:0,96,255:40,0 chr1 154562739 . T . PASS END=154562739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:38,0 chr1 154562740 . C . PASS END=154562831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:33:0,84,1260:0,90,255:40,0 chr1 154562832 . T . PASS END=154562844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:25,0 chr1 154562845 . C . PASS END=154562862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr1 154562863 . C . PASS END=154562880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 154562881 . C . PASS END=154562885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:8,0 chr1 154569271 . G . PASS END=154569271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 154569281 . T . PASS END=154569355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,988:0,84,255:40,2 chr1 154569356 . A . PASS END=154569356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1598:0,66,255:40,2 chr1 154569357 . A . PASS END=154569391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:38:0,94,1530:0,94,255:40,0 chr1 154569392 . A . PASS END=154569392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1267:0,62,255:35,0 chr1 154569393 . C . PASS END=154569404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1361:0,84,255:38,0 chr1 154569405 . T . PASS END=154569405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1282:0,62,255:32,0 chr1 154569406 . C . PASS END=154569407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 154569408 . T . PASS END=154569408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:34,0 chr1 154569409 . C . PASS END=154569416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1319:0,95,255:34,0 chr1 154569417 . T . PASS END=154569417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:30,0 chr1 154569418 . G . PASS END=154569434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1180:0,83,255:29,0 chr1 154569435 . C . PASS END=154569441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:23,0 chr1 154569442 . A . PASS END=154569442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:21,0 chr1 154569443 . T . PASS END=154569448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:24,0 chr1 154569449 . G . PASS END=154569449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 154569450 . A . PASS END=154569465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:25,0 chr1 154569466 . T . PASS END=154569466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 154569467 . T . PASS END=154569471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,917:0,75,255:25,0 chr1 154569591 . C . PASS END=154569591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154569599 . C . PASS END=154569603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 154569604 . T . PASS END=154569620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 154569621 . T . PASS END=154569697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1016:0,81,255:36,0 chr1 154569698 . C . PASS END=154569698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr1 154569699 . A . PASS END=154569731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1225:0,86,255:34,0 chr1 154569732 . C . PASS END=154569743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:26,0 chr1 154570304 . T . PASS END=154570442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1215:0,96,255:40,0 chr1 154570443 . A . PASS END=154570452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:25,0 chr1 154570874 . C . PASS END=154570874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154570878 . C . PASS END=154571038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1094:0,83,255:40,0 chr1 154571039 . T . PASS END=154571039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:28,0 chr1 154571040 . G . PASS END=154571040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1202:0,36,255:28,0 chr1 154571041 . A . PASS END=154571041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:28,0 chr1 154571042 . T . PASS END=154571061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:29:0,83,1078:0,83,255:30,0 chr1 154573517 . C . PASS END=154573521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,984:0,65,255:26,0 chr1 154573522 . T . PASS END=154573726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1055:0,81,255:39,0 chr1 154573727 . T . PASS END=154573727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 154573728 . T . PASS END=154573766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1213:0,90,255:35,0 chr1 154573767 . T . PASS END=154573767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:34,0 chr1 154573768 . T . PASS END=154573850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:33:0,89,1199:0,89,255:38,0 chr1 154573851 . G . PASS END=154573851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:34,0 chr1 154573852 . C . PASS END=154573864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1371:0,95,255:34,0 chr1 154573865 . T . PASS END=154573865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1219:0,69,255:33,0 chr1 154573866 . T . PASS END=154573866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:32,0 chr1 154573867 . T . PASS END=154573929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1156:0,83,255:37,0 chr1 154573930 . T . PASS END=154573966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,95,255:35,0 chr1 154573967 . T C, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,15,0:0,21,0:105:193,108,0,1395,108,1395:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,19:0,0,20,16 chr1 154573968 . T . PASS END=154574004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1249:0,89,255:34,0 chr1 154574005 . A . PASS END=154574072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1249:0,89,255:34,0 chr1 154574073 . T . PASS END=154574073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:27,0 chr1 154574074 . T . PASS END=154574079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1272:0,92,255:31,0 chr1 154574080 . T . PASS END=154574081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,82,255:26,0 chr1 154574082 . G . PASS END=154574094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1305:0,101,255:31,0 chr1 154574095 . C . PASS END=154574095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:29,0 chr1 154574096 . C . PASS END=154574195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1174:0,81,255:39,0 chr1 154574196 . A . LowGQ END=154574196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,7:39:0:39:0,0,878:22,0,255:32,0 chr1 154574197 . G . PASS END=154574311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1227:0,87,255:40,0 chr1 154574312 . G . PASS END=154574312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:32,0 chr1 154574313 . A . PASS END=154574387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1243:0,81,255:40,0 chr1 154574388 . G . PASS END=154574388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1078:0,45,255:32,0 chr1 154574389 . C . PASS END=154574394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1252:0,97,255:36,0 chr1 154574395 . A . PASS END=154574395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1173:0,78,255:33,0 chr1 154574396 . A . PASS END=154574397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1287:0,95,255:34,0 chr1 154574398 . A . PASS END=154574398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1092:0,45,255:32,0 chr1 154574399 . T . PASS END=154574403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1228:0,94,255:36,0 chr1 154574404 . T . PASS END=154574405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:33,0 chr1 154574406 . A . PASS END=154574419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,103,1366:0,103,255:38,0 chr1 154574420 . T . PASS END=154574420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1320:0,70,255:36,0 chr1 154574421 . T . PASS END=154574656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:36:0,81,1215:0,81,255:40,0 chr1 154574657 . T . PASS END=154574657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 154574658 . T . PASS END=154574771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1155:0,80,255:38,0 chr1 154574772 . T . PASS END=154574775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 154574776 . A . PASS END=154574776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 154574777 . C . PASS END=154574782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr1 154574783 . G . PASS END=154574784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr1 154574785 . A . PASS END=154574785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 154574786 . G . PASS END=154574789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1280:0,69,255:33,0 chr1 154574790 . G . PASS END=154574819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1219:0,99,255:34,0 chr1 154574820 . T C, 149.33 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,17,0:0,17,0:99:187,102,0,1310,102,1310:255,102,0:0,0:1.4933e+02,9.9327e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,22:0,0,15,19 chr1 154574821 . G . PASS END=154574826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,99,1302:0,102,255:37,0 chr1 154574827 . C . PASS END=154574827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:36,0 chr1 154574828 . A . PASS END=154574857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1260:0,96,255:37,0 chr1 154574858 . T . PASS END=154574860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 154574861 . C . PASS END=154574861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154574862 . T . PASS END=154574862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:24,0 chr1 154574863 . G . PASS END=154574879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:25:0,65,931:0,65,255:26,0 chr1 154574880 . C . PASS END=154574880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 154574881 . A . PASS END=154574883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 154574884 . T . PASS END=154574886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 154574887 . T . PASS END=154574913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,990:0,65,255:26,0 chr1 154574914 . G . PASS END=154574920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 154574921 . G . PASS END=154574925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 154574926 . C . PASS END=154574944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1088:0,87,255:30,0 chr1 154574945 . C . PASS END=154574945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 154574946 . C . PASS END=154575002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1017:0,84,255:37,0 chr1 154575003 . A . PASS END=154575039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1414:0,101,255:40,0 chr1 154575040 . C T, 178.96 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,24,0:0,20,0:129:217,132,0,1658,132,1658:255,132,0:0,0:1.7896e+02,1.2896e+02,0.0000e+00,4.5000e+02,1.6373e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,26:0,0,26,18 chr1 154575041 . C . PASS END=154575077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,98,255:40,0 chr1 154575078 . T . PASS END=154575089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,93,255:31,0 chr1 154575090 . T . PASS END=154575100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 154575101 . C . PASS END=154575102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr1 154580468 . C . PASS END=154580468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 154580469 . T . PASS END=154580482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,862:0,61,255:25,0 chr1 154580553 . A . PASS END=154580553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 154580567 . C . PASS END=154580567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 154580636 . G . PASS END=154580636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154597539 . T . PASS END=154597571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:33:0,90,1350:0,99,255:40,0 chr1 154600331 . C . PASS END=154600332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 154600333 . G . PASS END=154600333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 154600334 . G . PASS END=154600334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 154600335 . T . PASS END=154600335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 154600336 . C . PASS END=154600336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 154600337 . T . PASS END=154600341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154600342 . C . PASS END=154600346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 154600347 . T . PASS END=154600354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154600355 . C . PASS END=154600356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154600357 . G . PASS END=154600362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 154600363 . C . PASS END=154600363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154600364 . A . PASS END=154600364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,678:0,32,255:19,0 chr1 154600365 . C . PASS END=154600367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154600368 . G . PASS END=154600371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 154600372 . A G, 91.69 PASS DP=16;MQ=235.93;FractionInformativeReads=0.938 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,5,0:0,10,0:42:129,45,0,536,45,536:255,60,0:0,0:9.1686e+01,4.1686e+01,2.9459e-04,4.5000e+02,7.6456e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,13:0,0,12,3 chr1 154600373 . C . PASS END=154600373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 154600374 . T . PASS END=154600389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:33:20:0,33,495:0,43,255:13,0 chr1 154600390 . A . LowGQ END=154600415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,6:21:0:19:0,0,136:50,0,255:18,0 chr1 154600416 . G . PASS END=154600416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 154600417 . T . LowGQ END=154600418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,7:24:0:24:0,0,383:94,0,255:17,0 chr1 154600419 . G . PASS END=154600419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 154600420 . C . LowGQ END=154600434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,6:25:0:23:0,0,498:22,0,255:19,0 chr1 154600435 . G . PASS END=154600435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:18,0 chr1 154600436 . T . LowGQ END=154600437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,612:39,0,255:18,0 chr1 154600438 . G . PASS END=154600438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 154600439 . G . PASS END=154600439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154600440 . G . PASS END=154600440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 154600441 . A . LowGQ END=154600441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,698:0,0,255:20,0 chr1 154600442 . A . PASS END=154600442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,682:0,14,255:20,0 chr1 154600443 . T . PASS END=154600443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:20,0 chr1 154600444 . C . PASS END=154600444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 154600445 . A . PASS END=154600446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr1 154600447 . T . PASS END=154600447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,660:0,11,255:20,0 chr1 154600448 . G . PASS END=154600449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154600450 . T . PASS END=154600452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,668:0,11,255:19,0 chr1 154600453 . G . PASS END=154600454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154600455 . T . LowGQ END=154600456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,684:3,0,255:19,0 chr1 154600457 . G . PASS END=154600457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154600458 . C . LowGQ END=154600458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,690:3,0,255:18,0 chr1 154600459 . A . PASS END=154600459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,658:0,11,255:17,0 chr1 154600460 . G . PASS END=154600460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:17,0 chr1 154600461 . A . PASS END=154600461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:16,0 chr1 154600462 . T . PASS END=154600467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,675:0,44,255:16,0 chr1 154600468 . A . PASS END=154600468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,637:0,8,255:15,0 chr1 154600469 . C . PASS END=154600469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 154600470 . A . PASS END=154600472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:14,0 chr1 154600473 . A . PASS END=154600474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 154680452 . T . PASS END=154680452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 154680453 . T . PASS END=154680453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 154680454 . A . PASS END=154680506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,490:0,42,255:18,0 chr1 154680507 . A . PASS END=154680507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr1 154680508 . T . PASS END=154680528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,643:0,48,255:17,0 chr1 154680529 . T . PASS END=154680529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:16,0 chr1 154680530 . G . PASS END=154680536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 154680537 . G . PASS END=154680537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 154680538 . T . PASS END=154680546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 154680547 . C . PASS END=154680547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 154680548 . C . PASS END=154680554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 154680555 . A . PASS END=154680557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 154680558 . C . PASS END=154680562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 154680563 . G . PASS END=154680565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 154680566 . C . PASS END=154680567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154680568 . C . PASS END=154680584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:11,0 chr1 154680585 . A . LowGQ END=154680589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:13:0,0,396:0,0,255:11,1 chr1 154680590 . C . PASS END=154680604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 154680605 . C . PASS END=154680606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 154680607 . G . PASS END=154680633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 154680634 . A . PASS END=154680641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 154680642 . C . PASS END=154680644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154680645 . G . PASS END=154680645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154680646 . C . PASS END=154680646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 154680647 . G . PASS END=154680708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,599:0,48,255:19,0 chr1 154680709 . C . PASS END=154680710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 154680711 . T . PASS END=154680737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,651:0,51,255:19,0 chr1 154680738 . A . PASS END=154680738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:16,0 chr1 154680739 . C . PASS END=154680742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 154680743 . C . PASS END=154680743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 154680744 . T . PASS END=154680747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 154680748 . T . PASS END=154680748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 154685940 . C . PASS END=154686009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,146,255:40,0 chr1 154687352 . T . PASS END=154687479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,120,1800:0,138,255:40,0 chr1 154698392 . C . PASS END=154698393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 154698394 . G . PASS END=154698394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:23,0 chr1 154698395 . C . PASS END=154698402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154698403 . G . PASS END=154698403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154698404 . C . PASS END=154698404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154698405 . T . PASS END=154698418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1102:0,84,255:29,0 chr1 154698419 . G . PASS END=154698419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 154698420 . A . PASS END=154698481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:29:0,87,1057:0,87,255:36,0 chr1 154698482 . A . PASS END=154698490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:30:0,72,1080:0,74,255:26,0 chr1 154698491 . G . PASS END=154698502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:21:0,51,765:0,62,255:19,0 chr1 154705479 . C . PASS END=154705485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 154705486 . C . PASS END=154705491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:29,0 chr1 154705492 . A . PASS END=154705492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 154705493 . G . PASS END=154705498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:30,0 chr1 154705499 . A . PASS END=154705499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 154705500 . G . PASS END=154705609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1147:0,80,255:40,0 chr1 154705610 . G . PASS END=154705620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,77,255:26,0 chr1 154709520 . C . PASS END=154709539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,137,255:40,0 chr1 154709540 . A C, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.415;ReadPosRankSum=5.547;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:13,16,0:15,12,0:48:85,0,50,993,973,1966:255,0,255:27,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,14,14:19,9,18,10 chr1 154709541 . G . PASS END=154709564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,149,255:40,0 chr1 154744450 . C . PASS END=154744460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,652:0,41,255:19,0 chr1 154744461 . C . PASS END=154744461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 154744462 . A . PASS END=154744462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 154744463 . C . PASS END=154744466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 154744467 . C . PASS END=154744468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 154744469 . G . PASS END=154744470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 154744471 . C . PASS END=154744471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 154744472 . C . PASS END=154744474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 154744475 . G . PASS END=154744475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr1 154744476 . C . PASS END=154744481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 154744482 . T . PASS END=154744482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 154744483 . G . PASS END=154744491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,878:0,75,255:25,0 chr1 154744492 . A . PASS END=154744492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 154744493 . G . PASS END=154744500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 154744501 . G . PASS END=154744501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 154744502 . A . PASS END=154744505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 154744506 . C . PASS END=154744506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 154744507 . G . PASS END=154744507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 154744508 . A . PASS END=154744526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 154744527 . A . PASS END=154744527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 154744528 . G . PASS END=154744528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154744529 . A . PASS END=154744529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 154744530 . T . PASS END=154744536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 154744537 . G . PASS END=154744539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:26,0 chr1 154744540 . C . PASS END=154744540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 154744541 . G . PASS END=154744564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1022:0,68,255:26,0 chr1 154744565 . A . PASS END=154744571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 154744572 . T . PASS END=154744572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 154744573 . C . PASS END=154744581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 154744582 . G . PASS END=154744603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 154744604 . G . PASS END=154744605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,817:0,42,255:20,0 chr1 154744606 . A . PASS END=154744606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 154744607 . T . PASS END=154744610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,59,255:20,0 chr1 154744611 . T . PASS END=154744613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 154744614 . A . PASS END=154744614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 154744615 . G . PASS END=154744628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr1 154744629 . G . PASS END=154744631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154744632 . G . PASS END=154744632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154744633 . C . PASS END=154744633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 154744634 . A . PASS END=154744634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154744635 . T . PASS END=154744649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 154744650 . G . PASS END=154744651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 154744652 . T . PASS END=154744657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,56,255:19,0 chr1 154744658 . C . PASS END=154744669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 154744670 . G . PASS END=154744679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 154744680 . G . PASS END=154744700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 154744701 . C . PASS END=154744723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:19,0 chr1 154744724 . A . PASS END=154744724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 154744725 . A . PASS END=154744763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 154744764 . G . PASS END=154744786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,691:0,60,255:21,0 chr1 154744787 . A . PASS END=154744806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,49,255:19,0 chr1 154744807 . C . PASS END=154744808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 154744809 . G . PASS END=154744813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154744814 . C . PASS END=154744814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:10,0 chr1 154744815 . G . PASS END=154744821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 154744822 . G . PASS END=154744823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154744824 . T . PASS END=154744824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 154744825 . C . PASS END=154744851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 154744852 . A G, 49.86 PASS DP=15;MQ=248.11;MQRankSum=3.183;ReadPosRankSum=3.183;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:1,4,0:7,3,0:48:85,0,50,250,286,537:226,0,255:7,0:4.9855e+01,6.6527e-05,5.3000e+01,2.5035e+02,3.2093e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,6,1,6:5,3,4,3 chr1 154744853 . T . PASS END=154744869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 154794565 . C . PASS END=154794660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:43:0,116,1800:0,116,255:40,0 chr1 154832171 . C . PASS END=154832188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1669:0,120,255:40,0 chr1 154841508 . C . PASS END=154841702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,963:0,88,255:40,0 chr1 154841703 . G . PASS END=154841703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:28,0 chr1 154841704 . G . PASS END=154841705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 154841706 . A . PASS END=154841707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 154841708 . G . PASS END=154841735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 154841736 . A . PASS END=154841754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:23:0,62,945:0,62,255:26,0 chr1 154841755 . G . PASS END=154841782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,47,255:19,0 chr1 154841783 . C . PASS END=154841783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 154841784 . G . PASS END=154841809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:17:0,46,593:0,46,255:19,0 chr1 154841810 . A . PASS END=154841810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 154841811 . A . PASS END=154841843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,562:0,40,255:20,0 chr1 154841844 . G . PASS END=154841846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154841847 . G . PASS END=154841847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 154841848 . A . PASS END=154841866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 154841867 . T . PASS END=154841867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 154841868 . G . PASS END=154841873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 154841874 . G . PASS END=154841874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 154841875 . C . PASS END=154841906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,878:0,69,255:25,0 chr1 154841907 . G . PASS END=154841907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 154841908 . C . PASS END=154841938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,825:0,61,255:24,0 chr1 154841939 . T . PASS END=154841939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 154841940 . G . PASS END=154841944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:23,0 chr1 154841945 . C . PASS END=154841945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 154841946 . C . PASS END=154841949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154841950 . C . PASS END=154841950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 154841951 . G . PASS END=154841953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154841954 . G . PASS END=154841954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 154841955 . C . PASS END=154841955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 154841956 . A . PASS END=154841956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 154841957 . C . PASS END=154841958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 154841959 . A . PASS END=154841960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,851:0,42,255:21,0 chr1 154841961 . G . PASS END=154841970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 154841971 . T . PASS END=154841971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:21,0 chr1 154841972 . G . PASS END=154841984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 154841985 . G . PASS END=154841986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 154841987 . C . PASS END=154841989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 154841990 . C . PASS END=154841990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:20,0 chr1 154841991 . G . PASS END=154841993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 154841994 . A . PASS END=154841994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154841995 . G . PASS END=154841996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154841997 . C . PASS END=154842000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:55:22:0,55,784:0,55,255:20,0 chr1 154842001 . C . PASS END=154842004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,862:0,61,255:23,0 chr1 154842005 . T . PASS END=154842005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 154842006 . A . PASS END=154842008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 154842009 . T . PASS END=154842009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 154842010 . G . PASS END=154842023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:25,0 chr1 154842024 . G . PASS END=154842027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154842028 . C . PASS END=154842028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 154842029 . C . PASS END=154842029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 154842030 . A . PASS END=154842031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,947:0,64,255:27,0 chr1 154842032 . G . PASS END=154842034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 154842035 . A . PASS END=154842035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 154842036 . G . PASS END=154842036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,917:0,32,255:27,0 chr1 154842037 . T . PASS END=154842039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154842040 . T . PASS END=154842040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:27,0 chr1 154842041 . C . PASS END=154842042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154842043 . T . PASS END=154842043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:28,0 chr1 154842044 . T . PASS END=154842047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 154842048 . A . PASS END=154842049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:29,0 chr1 154842050 . T . PASS END=154842051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 154842052 . A . PASS END=154842052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr1 154842053 . G . PASS END=154842058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 154842059 . T . PASS END=154842059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 154842060 . G . PASS END=154842060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 154842061 . C . PASS END=154842061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 154842062 . C . PASS END=154842062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154842063 . T . PASS END=154842063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 154842064 . T . PASS END=154842070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 154842071 . A . PASS END=154842082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,955:0,67,255:26,0 chr1 154842083 . G . PASS END=154842091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 154842092 . T . PASS END=154842093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 154842094 . G . PASS END=154842096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 154842097 . T . PASS END=154842113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,955:0,67,255:26,0 chr1 154842114 . C . PASS END=154842118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 154842119 . A . PASS END=154842121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154842122 . C . PASS END=154842149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:40,0 chr1 154842150 . G . PASS END=154842177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:46:0,82,1795:0,82,255:40,0 chr1 154842178 . A . PASS END=154842178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:3:58:0,3,1831:0,3,255:40,0 chr1 154842179 . G . PASS END=154842179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,136,255:40,0 chr1 154842180 . C . PASS END=154842180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:28:61:0,28,1980:0,28,255:40,0 chr1 154842181 . T . LowGQ END=154842181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:0:63:0,0,1885:43,0,255:40,0 chr1 154842182 . G . PASS END=154842182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,120,1800:0,157,255:40,0 chr1 154842183 . A . LowGQ END=154842183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,9:65:0:65:0,0,1723:154,0,255:40,0 chr1 154842184 . G . PASS END=154842184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:66:0,120,1800:0,143,255:40,0 chr1 154842185 . A . LowGQ END=154842187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,11:66:0:65:0,0,1499:0,0,255:40,0 chr1 154842188 . G . PASS END=154842188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,160,255:40,0 chr1 154842189 . G . LowGQ END=154842190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,12:67:0:67:0,0,1540:219,0,255:22,0 chr1 154842191 . G . PASS END=154842191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:96:66:0,96,1440:0,159,255:32,0 chr1 154842192 . A . LowGQ END=154842192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,13:66:0:66:0,0,1506:255,0,255:15,0 chr1 154842193 . T . PASS END=154842193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:78:66:0,78,1170:0,160,255:26,0 chr1 154842194 . G . PASS END=154842194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:81:66:0,81,1215:0,159,255:26,0 chr1 154842195 . C . PASS END=154842195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:78:66:0,78,1170:0,198,255:26,0 chr1 154842196 . G . LowGQ END=154842196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,14:67:0:67:0,0,1458:255,0,255:12,0 chr1 154842197 . G . PASS END=154842197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:78:67:0,78,1170:0,163,255:25,0 chr1 154842198 . T . LowGQ END=154842198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,13:66:0:66:0,0,1414:255,0,255:12,0 chr1 154842199 . G GGCTGCTGCTGCT,GGCTGCTGCTGCTGCT,GGCTGCTGCT, 396.24 PASS DP=66;MQ=231.84;FractionInformativeReads=0.788 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,25,17,10,0:0.481,0.327,0.192,0.000:52:0,14,9,4,0:0,11,8,6,0:48:400,352,49,348,0,52,851,214,171,223,613,245,197,461,441:255,0,255:0,57:3.9624e+02,3.5009e+02,4.9860e+01,3.4624e+02,6.6527e-05,5.3000e+01,4.5000e+02,2.1375e+02,1.7108e+02,2.2408e+02,4.5000e+02,2.7770e+02,2.2932e+02,4.5000e+02,4.5000e+02:0.00,2.00,5.00,2.00,4.00,5.00,2.00,4.00,4.00,5.00,34.77,36.77,36.77,36.77,37.77:0,0,29,23:0,0,26,26 chr1 154842200 . G . LowGQ END=154842200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,34:68:0:68:0,0,8:255,0,255:40,0 chr1 154842201 . C . PASS END=154842242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,172,255:40,1 chr1 154842243 . A . LowGQ END=154842244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,7:72:0:72:0,0,2201:33,0,255:40,0 chr1 154842245 . G . PASS END=154842249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:71:0,120,1800:0,200,255:40,0 chr1 154842250 . G . LowGQ END=154842250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,6:71:0:71:0,0,2241:11,0,255:40,0 chr1 154842251 . G . PASS END=154842251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr1 154842252 . A . PASS END=154842252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,6:71:3:71:0,3,2271:0,3,255:40,0 chr1 154842253 . G . PASS END=154842253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,5:71:20:71:0,20,2298:0,20,255:40,0 chr1 154842254 . G . PASS END=154842370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1215:0,96,255:40,0 chr1 154842371 . G . PASS END=154842407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:26,0 chr1 154842408 . C . PASS END=154842408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 154842409 . C . PASS END=154842411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,853:0,66,255:22,0 chr1 154842412 . G . PASS END=154842418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:23:0,45,675:0,59,255:17,0 chr1 154842419 . G . PASS END=154842434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:14:0,33,495:0,42,255:13,0 chr1 154842435 . G . PASS END=154842440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:41:14:0,41,334:0,41,255:14,0 chr1 154897605 . C . LowGQ END=154897605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:0:34:0,0,1000:23,0,255:30,0 chr1 154897606 . T . PASS END=154897606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,984:0,36,255:30,0 chr1 154897607 . A . PASS END=154897609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1164:0,85,255:33,0 chr1 154897610 . G . LowGQ END=154897610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,977:14,0,255:30,0 chr1 154897611 . T . PASS END=154897611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1158:0,88,255:34,0 chr1 154897612 . C . PASS END=154897612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1106:0,17,255:31,0 chr1 154897613 . T . PASS END=154897613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1133:0,50,255:33,0 chr1 154897614 . G . PASS END=154897615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1168:0,88,255:34,0 chr1 154897616 . A . PASS END=154897616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:34,0 chr1 154897617 . G . PASS END=154897618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1215:0,88,255:35,0 chr1 154897619 . G . PASS END=154897619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:34,0 chr1 154897620 . G . PASS END=154897622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1325:0,105,255:35,0 chr1 154897623 . A . PASS END=154897623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1073:0,57,255:33,0 chr1 154897624 . A . PASS END=154897625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1187:0,88,255:34,0 chr1 154897626 . T . PASS END=154897626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:27:35:0,27,1065:0,27,255:32,0 chr1 154897627 . T . PASS END=154897627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 154897628 . C . PASS END=154897628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 154897629 . T . PASS END=154897631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 154897632 . C . PASS END=154897632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:27:35:0,27,1140:0,27,255:32,0 chr1 154897633 . A . PASS END=154897633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 154897634 . G . PASS END=154897634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr1 154897635 . G . PASS END=154897637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1236:0,92,255:35,0 chr1 154897638 . C . PASS END=154897638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:33,0 chr1 154897639 . T . PASS END=154897639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:35,0 chr1 154897640 . C . PASS END=154897640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1161:0,45,255:33,0 chr1 154897641 . C . PASS END=154897641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 154897642 . A . PASS END=154897642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1246:0,72,255:36,0 chr1 154897643 . A . PASS END=154897644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1296:0,80,255:36,0 chr1 154897645 . T . PASS END=154897645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1224:0,47,255:34,0 chr1 154897646 . G . PASS END=154897647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:75:36:0,75,1241:0,75,255:35,0 chr1 154897648 . T . PASS END=154897648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1327:0,108,255:36,0 chr1 154897649 . C . PASS END=154897649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:35,0 chr1 154897650 . C . PASS END=154897671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:36:0,82,1349:0,82,255:40,0 chr1 154897672 . T . PASS END=154897672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1426:0,79,255:36,0 chr1 154897673 . G . PASS END=154897674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:93:44:0,93,1552:0,93,255:40,0 chr1 154897675 . T . PASS END=154897675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1336:0,68,255:36,0 chr1 154897676 . T . PASS END=154897697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1390:0,87,255:39,0 chr1 154897698 . C . PASS END=154897698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 154897699 . C . PASS END=154897705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,101,1374:0,101,255:37,0 chr1 154897706 . T . PASS END=154897706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:33,0 chr1 154897707 . G . PASS END=154897731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:35:0,83,1232:0,83,255:35,0 chr1 154897732 . T . PASS END=154897741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,900:0,87,255:22,0 chr1 154898830 . C . PASS END=154898830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1092:0,87,255:29,0 chr1 154898831 . T . PASS END=154898832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 154898833 . G . PASS END=154898835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 154898836 . T . PASS END=154898837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 154898838 . A . PASS END=154898842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 154898843 . C . PASS END=154898843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 154898844 . C . PASS END=154898846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154898847 . C . PASS END=154898847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 154898848 . C . PASS END=154898881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1088:0,83,255:34,0 chr1 154898882 . G . PASS END=154898882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:30,0 chr1 154898883 . C . PASS END=154898895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:32,0 chr1 154898896 . T . PASS END=154898896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:29,0 chr1 154898897 . C . PASS END=154898907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr1 154898908 . A . PASS END=154898908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 154898909 . G . PASS END=154898911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 154898912 . C . PASS END=154898912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:27,0 chr1 154898913 . T . PASS END=154898914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154898915 . C . PASS END=154898915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,920:0,37,255:26,0 chr1 154898916 . C . PASS END=154898919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:28,0 chr1 154898920 . A . PASS END=154898920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,854:0,51,255:26,0 chr1 154898921 . C . PASS END=154898921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 154898922 . C . PASS END=154898922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 154898923 . A . PASS END=154898923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:26,0 chr1 154898924 . C . PASS END=154898925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154898926 . G . PASS END=154898933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,976:0,68,255:26,0 chr1 154898934 . G . PASS END=154898934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,908:0,29,255:22,0 chr1 154898935 . A . PASS END=154898943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:25,0 chr1 154898944 . G . PASS END=154898944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:19,0 chr1 154898945 . T . PASS END=154898945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 154898946 . G . PASS END=154898946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 154898947 . T . PASS END=154898950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr1 154898951 . A . PASS END=154898953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,855:0,59,255:19,0 chr1 154898954 . C . PASS END=154898954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:18,0 chr1 154898955 . A . PASS END=154898956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,747:0,52,255:19,0 chr1 154898957 . C . PASS END=154898958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154898959 . G . PASS END=154898959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 154901500 . C . PASS END=154901505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 154901506 . G . PASS END=154901630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:31:0,84,1260:0,93,255:40,0 chr1 154901631 . T . PASS END=154901631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:30,0 chr1 154901632 . C . PASS END=154901644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,92,255:32,0 chr1 154901645 . C . PASS END=154901652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,65,255:25,0 chr1 154904828 . C . PASS END=154904891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:55:0,120,1800:0,161,255:40,0 chr1 154908871 . C . PASS END=154908923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:33:0,89,1213:0,89,255:40,0 chr1 154909067 . C . PASS END=154909124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1243:0,86,255:34,0 chr1 154909125 . G . PASS END=154909157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr1 154909158 . C . PASS END=154909158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 154909159 . C . PASS END=154909159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154909160 . A . PASS END=154909160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 154909161 . T . PASS END=154909161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154917500 . T . PASS END=154917576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1072:0,87,255:35,0 chr1 154917577 . T . PASS END=154917577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 154917578 . G . PASS END=154917582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154917583 . T . PASS END=154917586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154917587 . C . PASS END=154917588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154917589 . C . PASS END=154917593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 154918048 . C . PASS END=154918153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:35:0,80,1163:0,80,255:39,0 chr1 154918154 . T . PASS END=154918154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:30,0 chr1 154918155 . G . PASS END=154918174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:32,0 chr1 154918175 . A . PASS END=154918176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,847:0,65,255:31,0 chr1 154918177 . T . PASS END=154918183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1186:0,83,255:30,0 chr1 154918184 . A . PASS END=154918184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 154918185 . G . PASS END=154918187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 154918188 . G . PASS END=154918197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 154918198 . T . PASS END=154918204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 154918205 . A . PASS END=154918238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,962:0,78,255:26,0 chr1 154918239 . G . PASS END=154918239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 154918240 . G . PASS END=154918241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154918242 . T . PASS END=154918242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154918243 . A . PASS END=154918265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,71,255:27,0 chr1 154918266 . C . PASS END=154918270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154918271 . G . PASS END=154918274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 154918275 . C . PASS END=154918279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154918280 . C . PASS END=154918282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 154918283 . A . PASS END=154918284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154918285 . T . PASS END=154918301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,939:0,78,255:26,0 chr1 154918302 . G . PASS END=154918320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr1 154918321 . A . PASS END=154918365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:26,0 chr1 154918366 . G . PASS END=154918387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:22:0,42,630:0,66,255:19,0 chr1 154918388 . A . PASS END=154918388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 154918389 . G . PASS END=154918398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:20:0,57,855:0,60,255:19,0 chr1 154918399 . G . PASS END=154918415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 154918416 . C . PASS END=154918427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 154918428 . C . PASS END=154918428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 154918429 . C . PASS END=154918438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1172:0,87,255:31,0 chr1 154918439 . G . PASS END=154918439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:29,0 chr1 154918440 . G . PASS END=154918475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1086:0,80,255:32,0 chr1 154918476 . A . PASS END=154918476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 154918477 . G . PASS END=154918519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1027:0,87,255:34,0 chr1 154918520 . T . PASS END=154918520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:30,0 chr1 154918521 . C . PASS END=154918549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,83,255:32,0 chr1 154918550 . T . PASS END=154918555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr1 154918556 . C . PASS END=154918652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1124:0,80,255:36,0 chr1 154918653 . C . PASS END=154918653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 154918654 . C . PASS END=154918673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1123:0,80,255:32,0 chr1 154918674 . A . PASS END=154918674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 154918675 . T . PASS END=154918677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1172:0,83,255:31,0 chr1 154918678 . T . PASS END=154918678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 154918679 . T . PASS END=154918698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:31,0 chr1 154918699 . T . PASS END=154918710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:29:0,62,1035:0,62,255:26,0 chr1 154918711 . T . PASS END=154918711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,875:0,12,255:22,0 chr1 154918712 . C . PASS END=154918719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:24,0 chr1 154918720 . T . PASS END=154918721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:21,0 chr1 154918722 . T . PASS END=154918736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 154918737 . C . PASS END=154918755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:17:0,45,675:0,50,255:18,0 chr1 154918756 . T . PASS END=154918756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 154918757 . G . PASS END=154918762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 154918763 . T . PASS END=154918792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 154918793 . A . PASS END=154918802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 154918803 . G . PASS END=154918826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 154918827 . C . PASS END=154918827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 154918828 . T . PASS END=154918838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154918839 . G . PASS END=154918839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 154918840 . G . PASS END=154918843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154918844 . A . PASS END=154918844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:13,0 chr1 154918845 . T . PASS END=154918845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr1 154918846 . C . PASS END=154918849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 154918850 . G . PASS END=154918850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 154918851 . G . PASS END=154918872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 154918873 . T . PASS END=154918873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154918874 . G . PASS END=154918874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 154918875 . A . PASS END=154918881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154918882 . T . PASS END=154918882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 154918883 . C . PASS END=154918964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:14:0,40,543:0,40,255:18,0 chr1 154918965 . C . PASS END=154918966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 154918967 . T . PASS END=154918967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 154918968 . T . PASS END=154918969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 154918970 . A . PASS END=154918973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 154918974 . C . PASS END=154918975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154918976 . G . PASS END=154918977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154918978 . G . PASS END=154918982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 154918983 . A . PASS END=154918983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154918984 . G . PASS END=154918999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 154919000 . T . PASS END=154919002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 154919003 . G . PASS END=154919003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154919004 . C . PASS END=154919004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 154919005 . T . PASS END=154919013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr1 154919014 . C . PASS END=154919014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 154919015 . T . PASS END=154919019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 154919020 . T . PASS END=154919042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,737:0,57,255:19,0 chr1 154919043 . T . PASS END=154919048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 154919049 . C . PASS END=154919053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 154919054 . T . PASS END=154919077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,759:0,47,255:19,0 chr1 154919078 . T . PASS END=154919079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 154919080 . C T, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=1.395;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:3,6,0:7,7,0:48:85,0,49,434,358,791:255,0,255:10,0:5.0000e+01,6.9375e-05,5.2249e+01,4.3376e+02,3.9245e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,10,3:5,5,7,6 chr1 154919081 . C . PASS END=154919094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 154919095 . A . PASS END=154919095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 154919096 . C . PASS END=154919103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 154919104 . G . PASS END=154919117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,46,255:18,0 chr1 154919118 . G . PASS END=154919120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154919121 . G . PASS END=154919147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:31:13:0,31,437:0,31,255:14,0 chr1 154919148 . C . PASS END=154919154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 154919155 . T . PASS END=154919155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 154919156 . G . PASS END=154919157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 154919158 . A . PASS END=154919158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 154919159 . G . PASS END=154919170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:18,0 chr1 154919171 . G . PASS END=154919172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 154919173 . G . PASS END=154919184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 154919185 . G . PASS END=154919217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 154919218 . G . PASS END=154919235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:17,0 chr1 154919236 . C . PASS END=154919236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 154919237 . C . PASS END=154919237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154919238 . T . PASS END=154919238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 154919239 . T . PASS END=154919239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154919240 . T . PASS END=154919240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 154919241 . G . PASS END=154919246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 154919247 . G . PASS END=154919279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 154919722 . T . PASS END=154919732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 154919733 . G . PASS END=154919762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,203:0,21,203:8,0 chr1 154919763 . G . PASS END=154919766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 154919767 . A . PASS END=154919767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 154919768 . T . PASS END=154919772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 154919773 . G . PASS END=154919773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 154919774 . G . PASS END=154919802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:12,0 chr1 154919803 . A . PASS END=154919803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 154919804 . T . PASS END=154919826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 154919827 . G . PASS END=154919846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr1 154919847 . G . PASS END=154919851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 154919852 . A . PASS END=154919855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154919856 . G . PASS END=154919857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154919858 . G . PASS END=154919861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:21,0 chr1 154919862 . C . PASS END=154919880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:26,0 chr1 154919881 . G . PASS END=154919884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 154919885 . G . PASS END=154919885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 154919886 . T . PASS END=154919913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1072:0,87,255:34,0 chr1 154919914 . C . PASS END=154919914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr1 154919915 . C . PASS END=154919969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1103:0,80,255:34,0 chr1 154919970 . G . PASS END=154920002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 154920003 . G . PASS END=154920011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:18,0 chr1 154920012 . C . PASS END=154920014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154920015 . T . PASS END=154920016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154920017 . A . PASS END=154920020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154920021 . C . PASS END=154920023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 154920024 . C . PASS END=154920024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154920118 . C . PASS END=154920118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 154920119 . T . PASS END=154920119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 154920120 . G . PASS END=154920142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1111:0,90,255:31,0 chr1 154920143 . A . PASS END=154920143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 154920144 . C . PASS END=154920156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 154920157 . G . PASS END=154920161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 154920162 . C . PASS END=154920163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 154920164 . T . PASS END=154920188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,74,255:26,0 chr1 154920458 . C . PASS END=154920474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1263:0,86,255:33,0 chr1 154920475 . A . PASS END=154920475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:28,0 chr1 154920476 . G . PASS END=154920477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr1 154920478 . C . PASS END=154920480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 154920481 . C . PASS END=154920481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 154920609 . C . PASS END=154920609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 154920610 . T . PASS END=154920610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 154920611 . G . PASS END=154920626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 154920627 . C . PASS END=154920629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154920630 . G . PASS END=154920636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 154920637 . C . PASS END=154920637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 154920638 . A . PASS END=154920638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 154920639 . G . PASS END=154920657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 154920658 . G . PASS END=154920658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 154920659 . C . PASS END=154920663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:12,0 chr1 154920664 . G . PASS END=154920665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 154920666 . T . PASS END=154920666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 154920667 . G . PASS END=154920669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 154920670 . G . PASS END=154920670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 154920671 . G . PASS END=154920673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 154920674 . A . PASS END=154920688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 154920689 . C . PASS END=154920730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 154920731 . A . PASS END=154920731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 154920732 . C . PASS END=154920739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 154920740 . T . PASS END=154920740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 154920741 . G . PASS END=154920763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,729:0,54,255:19,0 chr1 154920764 . C . PASS END=154920768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 154920769 . T . PASS END=154920780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 154920781 . C . PASS END=154920797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:22,0 chr1 154920798 . T . PASS END=154920798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 154920799 . G . PASS END=154920858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,823:0,61,255:26,0 chr1 154920859 . G . PASS END=154920877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr1 154923708 . C . PASS END=154923717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 154923718 . G . PASS END=154923718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 154923719 . G . PASS END=154923734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:18,0 chr1 154923735 . G . PASS END=154923740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154923741 . G . PASS END=154923741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 154923742 . G . PASS END=154923743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 154923744 . T . PASS END=154923744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 154923745 . C . PASS END=154923750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 154923751 . T . PASS END=154923751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 154923752 . T . PASS END=154923761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 154923762 . G . PASS END=154923794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:31,0 chr1 154923795 . T . PASS END=154923795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 154923796 . C . PASS END=154923837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 154923838 . A . PASS END=154923847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 154923848 . C . PASS END=154923853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154923854 . A . PASS END=154923854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,694:0,66,255:26,0 chr1 154923855 . C . PASS END=154923856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154923857 . T . PASS END=154923857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 154923858 . C . PASS END=154923858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 154923859 . A . PASS END=154923861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154923862 . T . PASS END=154923867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 154923868 . G . PASS END=154923873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 154923947 . C . PASS END=154923958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 154923959 . C . PASS END=154923960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 154923961 . C . PASS END=154923961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154923962 . C . PASS END=154923972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 154923973 . T . PASS END=154923973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154923974 . G . PASS END=154923975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154923976 . T . PASS END=154923976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154923977 . G . PASS END=154923979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 154923980 . A . PASS END=154923997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 154923998 . C . PASS END=154924011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,987:0,81,255:28,0 chr1 154924271 . C . PASS END=154924386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:36:0,95,1415:0,95,255:40,0 chr1 154924387 . A . PASS END=154924387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1357:0,43,255:29,0 chr1 154924388 . C . PASS END=154924390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr1 154924391 . G . PASS END=154924391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:29,0 chr1 154924392 . C . PASS END=154924397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,92,255:29,0 chr1 154926147 . C . PASS END=154926152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,100,1368:0,100,255:38,0 chr1 154926153 . G . PASS END=154926153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1322:0,68,255:34,0 chr1 154926154 . C . PASS END=154926190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,92,255:37,0 chr1 154926191 . A . PASS END=154926191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1160:0,74,255:26,0 chr1 154926192 . G . PASS END=154926197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154931255 . T . PASS END=154931269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 154931270 . A . PASS END=154931270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 154931271 . G . PASS END=154931286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 154931287 . T . PASS END=154931287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 154931288 . G . PASS END=154931289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154931290 . C . PASS END=154931290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 154931291 . C . PASS END=154931315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 154931316 . T . PASS END=154931343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,775:0,60,255:24,0 chr1 154931344 . C . PASS END=154931344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 154931345 . C . PASS END=154931357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr1 154931358 . G . PASS END=154931358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 154931359 . C . PASS END=154931371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 154931372 . C . PASS END=154931389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,628:0,43,255:19,0 chr1 154931390 . A . PASS END=154931393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 154931394 . A . PASS END=154931394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 154931395 . T . PASS END=154931415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 154931416 . A . PASS END=154931416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 154931417 . C . PASS END=154931432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,847:0,69,255:23,0 chr1 154931433 . G . PASS END=154931433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 154931434 . C . PASS END=154931458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:25,0 chr1 154931459 . A . PASS END=154931504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 154931505 . G . PASS END=154931505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 154931506 . G . PASS END=154931513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 154931514 . T . PASS END=154931514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,1 chr1 154931515 . G . LowGQ END=154931515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,530:0,0,255:14,1 chr1 154931516 . G . PASS END=154931516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 154931517 . G . PASS END=154931529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 154931530 . C . PASS END=154931557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,443:0,36,255:13,0 chr1 154931558 . G . LowGQ END=154931558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 154931559 . T . PASS END=154931590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:12,0 chr1 154931591 . G . PASS END=154931591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 154931592 . C . PASS END=154931603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:12,0 chr1 154931604 . A . PASS END=154931609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 154931610 . G . PASS END=154931610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 154931611 . G . PASS END=154931612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:15,0 chr1 154931613 . T . PASS END=154931613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 154931614 . G . PASS END=154931615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 154931616 . T . PASS END=154931616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 154931617 . T . PASS END=154931630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,446:0,45,255:15,0 chr1 154931631 . G . PASS END=154931631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154931632 . C . PASS END=154931632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154931633 . A . PASS END=154931633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 154931634 . G . PASS END=154931644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 154931645 . T . PASS END=154931646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 154931647 . A . PASS END=154931654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:18,0 chr1 154931655 . T . PASS END=154931655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 154931656 . C . PASS END=154931658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,586:0,54,255:18,0 chr1 154931659 . G . PASS END=154931660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 154931661 . G . PASS END=154931664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 154931665 . A . PASS END=154931665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 154931666 . A . PASS END=154931666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 154931667 . G . PASS END=154931667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 154931668 . C . PASS END=154931670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 154931671 . T . PASS END=154931671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 154931672 . A . PASS END=154931675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:18,0 chr1 154931676 . G . PASS END=154931676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 154931677 . C . PASS END=154931677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 154931678 . A . PASS END=154931678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 154931679 . G . PASS END=154931692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 154931693 . C . PASS END=154931696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 154931697 . C . PASS END=154931698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 154931699 . C . PASS END=154931704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:20,0 chr1 154931705 . C . PASS END=154931709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 154931710 . C . PASS END=154931710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 154931711 . A . PASS END=154931712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 154931713 . C . PASS END=154931714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 154931715 . G . PASS END=154931718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154931719 . C . PASS END=154931720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:19,0 chr1 154931721 . G . PASS END=154931722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154931723 . A . PASS END=154931723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,647:0,46,255:19,0 chr1 154931724 . A . PASS END=154931728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 154931729 . A . PASS END=154931731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,676:0,46,255:19,0 chr1 154931732 . G . PASS END=154931739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154931740 . C . PASS END=154931740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 154931741 . A . PASS END=154931743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 154931744 . A . PASS END=154931747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:19,0 chr1 154931748 . G . PASS END=154931749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154931750 . A . PASS END=154931750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 154931751 . C . PASS END=154931751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154931752 . T . PASS END=154931752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:18,0 chr1 154931753 . T . PASS END=154931753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154931754 . G . PASS END=154931754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154931755 . T . PASS END=154931755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 154931756 . G . PASS END=154931762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 154931763 . G . PASS END=154931763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 154931764 . G . PASS END=154931777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 154931778 . C . PASS END=154931778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:20,0 chr1 154931779 . C . PASS END=154931786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 154931787 . G . PASS END=154931787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 154931788 . G . PASS END=154931802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:25,0 chr1 154931803 . A . PASS END=154931804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,706:0,46,255:20,0 chr1 154931805 . G . PASS END=154931809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 154931810 . A . PASS END=154931810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 154931811 . A . PASS END=154931814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 154931815 . G . PASS END=154931819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,753:0,49,255:19,0 chr1 154931820 . C . PASS END=154931823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154931824 . G . PASS END=154931832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154931833 . A . PASS END=154931833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,639:0,29,255:18,0 chr1 154931834 . T . PASS END=154931834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154931835 . C . PASS END=154931836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 154931837 . T . PASS END=154931837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:18,0 chr1 154931838 . T . PASS END=154931875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,623:0,41,255:18,0 chr1 154931876 . C . PASS END=154931876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 154931877 . T . PASS END=154931897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 154931898 . A . PASS END=154931898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 154931899 . T . PASS END=154931908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 154931909 . T . PASS END=154931909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 154931910 . C . PASS END=154931910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154931911 . C . PASS END=154931913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154931914 . C . PASS END=154931915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154931916 . A . PASS END=154931928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,32,255:13,0 chr1 154931929 . T . PASS END=154931929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 154931930 . C . PASS END=154931938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 154931939 . A . PASS END=154931939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 154931940 . C . PASS END=154931945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 154931946 . G . PASS END=154931946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 154931947 . G . PASS END=154931949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 154931950 . T . PASS END=154931951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 154931952 . A . LowGQ END=154931952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:7,0 chr1 154931953 . A . PASS END=154931953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:8,0 chr1 154931954 . G . PASS END=154931968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 154931969 . C . PASS END=154931979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 154931980 . G . PASS END=154931980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 154931981 . T . PASS END=154931988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 154931989 . G . PASS END=154931989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:9,0 chr1 154931990 . A . PASS END=154931995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 154931996 . C . PASS END=154931996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,290:0,2,255:9,0 chr1 154931997 . A . PASS END=154931997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 154931998 . T . PASS END=154931999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 154932000 . T . PASS END=154932003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154932004 . C . PASS END=154932004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 154932005 . T . PASS END=154932013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154932014 . G . PASS END=154932018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 154932019 . C . PASS END=154932019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 154932020 . A . PASS END=154932026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154932027 . T . PASS END=154932027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 154932028 . G . PASS END=154932036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 154932037 . T . PASS END=154932037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 154932038 . G . PASS END=154932053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 154932054 . A . PASS END=154932054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 154932055 . T . PASS END=154932055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 154932056 . A . PASS END=154932056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,378:0,20,255:9,0 chr1 154932057 . G . PASS END=154932059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 154932060 . T . PASS END=154932060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 154932061 . T . PASS END=154932068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,360:0,33,255:11,0 chr1 154932069 . A . LowGQ END=154932069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,333:6,0,255:10,0 chr1 154932070 . A . PASS END=154932089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,366:0,33,255:13,0 chr1 154932090 . A . PASS END=154932090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 154932091 . G . PASS END=154932119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 154932120 . C . PASS END=154932126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:12,0 chr1 154932127 . C . PASS END=154932128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 154932129 . G . PASS END=154932139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 154932140 . G . PASS END=154932140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 154932141 . C . PASS END=154932142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 154932143 . C . PASS END=154932165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 154932166 . A . PASS END=154932166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 154932167 . G . PASS END=154932195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,590:0,41,255:19,0 chr1 154932196 . A . PASS END=154932196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 154932197 . T . PASS END=154932233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,599:0,51,255:17,0 chr1 154932234 . T . PASS END=154932234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 154932235 . C . PASS END=154932235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 154932236 . A . PASS END=154932236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 154932237 . T . PASS END=154932251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,540:0,51,255:17,0 chr1 154932252 . G . PASS END=154932253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 154932254 . T . PASS END=154932257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 154932258 . A . PASS END=154932258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 154932259 . C . PASS END=154932272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 154932273 . A . PASS END=154932273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 154932274 . T . PASS END=154932287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 154932288 . G . PASS END=154932288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154932289 . G . PASS END=154932290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 154932291 . G . PASS END=154932291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 154932292 . C . PASS END=154932292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:12,0 chr1 154932293 . A . PASS END=154932295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,496:0,31,255:13,0 chr1 154932296 . C . PASS END=154932305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,511:0,42,255:14,0 chr1 154932306 . T . PASS END=154932307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154932308 . T . PASS END=154932314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154932315 . G . PASS END=154932320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 154932321 . C . PASS END=154932321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 154932322 . C . PASS END=154932322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 154933453 . C . PASS END=154933493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:40:0,93,1376:0,93,255:40,0 chr1 154933494 . T . PASS END=154933494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:63:43:0,63,1309:0,63,255:36,0 chr1 154933495 . T . PASS END=154933502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1482:0,107,255:40,0 chr1 154933950 . C . PASS END=154933987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,584:0,40,255:19,0 chr1 154933988 . G . PASS END=154934003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,31,255:13,0 chr1 154934004 . C . PASS END=154934007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 154934008 . A . PASS END=154934008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 154934009 . C . PASS END=154934010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 154934011 . T . PASS END=154934011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,416:0,9,255:12,0 chr1 154934012 . C . PASS END=154934020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 154934021 . T . PASS END=154934021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 154934022 . T . PASS END=154934041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,470:0,45,255:15,0 chr1 154934042 . G . PASS END=154934048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 154934049 . C . PASS END=154934049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr1 154934050 . C . PASS END=154934052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 154934089 . A . PASS END=154934100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:12,0 chr1 154934101 . T . PASS END=154934102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 154934103 . G . PASS END=154934132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 154934133 . G . PASS END=154934133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 154934134 . G . PASS END=154934152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 154934153 . G . PASS END=154934153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 154934154 . C . PASS END=154934156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154934157 . C . PASS END=154934172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 154934173 . C . PASS END=154934175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154934176 . C . PASS END=154934183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 154934184 . A . PASS END=154934184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 154934185 . A . PASS END=154934204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 154934205 . A . PASS END=154934206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 154934207 . T . PASS END=154934211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 154934212 . G . PASS END=154934212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 154934213 . C . PASS END=154934215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 154934216 . T . PASS END=154934216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 154934217 . C . PASS END=154934233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:43:19:0,43,668:0,43,255:19,0 chr1 154934234 . G . PASS END=154934234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 154934235 . C . PASS END=154934247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 154934248 . C . PASS END=154934252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 154934253 . G . PASS END=154934253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 154934254 . G . PASS END=154934269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:23,0 chr1 154934270 . C . PASS END=154934270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 154934271 . G . PASS END=154934271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 154934272 . G . PASS END=154934280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,56,255:19,0 chr1 154934281 . A . PASS END=154934281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,67,255:19,0 chr1 154934282 . C . PASS END=154934282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:18,0 chr1 154934283 . T . PASS END=154934284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154934285 . A . PASS END=154934285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,688:0,33,255:18,0 chr1 154934286 . G . PASS END=154934288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 154934289 . C . PASS END=154934290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 154934291 . G . PASS END=154934291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154934292 . C . PASS END=154934292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 154934293 . G . PASS END=154934307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 154934308 . G . PASS END=154934308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 154934309 . G . PASS END=154934314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 154934315 . A . PASS END=154934315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 154934316 . C . PASS END=154934328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 154934329 . C . PASS END=154934329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 154934330 . T . PASS END=154934352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 154934353 . A . PASS END=154934356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 154934357 . G . PASS END=154934360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 154934361 . T . PASS END=154934362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 154934363 . C . PASS END=154934374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 154934375 . G . PASS END=154934375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 154934376 . C . PASS END=154934378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 154934379 . G . PASS END=154934379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 154934380 . T . PASS END=154934388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 154934389 . T . PASS END=154934389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 154934390 . C . PASS END=154934408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,762:0,66,255:22,0 chr1 154934409 . C . PASS END=154934448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:19,0 chr1 154934449 . T . PASS END=154934449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 154934450 . G . PASS END=154934454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 154934455 . A . PASS END=154934457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,57,255:13,0 chr1 154934458 . G . PASS END=154934459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 154934460 . A . PASS END=154934462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,63,255:12,0 chr1 154934463 . A . PASS END=154934468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:15,0 chr1 154934469 . G . PASS END=154934500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 154934501 . A . PASS END=154934513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:17,0 chr1 154934514 . C . PASS END=154934514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:16,0 chr1 154934515 . C . PASS END=154934531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 154934532 . C . PASS END=154934540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,770:0,60,255:22,0 chr1 154934541 . C . PASS END=154934542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154934543 . G . PASS END=154934572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,870:0,65,255:26,0 chr1 154934573 . G . PASS END=154934573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 154934574 . C . PASS END=154934574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 154934575 . C . PASS END=154934579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 154934580 . C . PASS END=154934582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154934583 . A . PASS END=154934604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1049:0,87,255:29,0 chr1 154934605 . G . PASS END=154934605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 154934606 . G . PASS END=154934611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 154934612 . A . PASS END=154934612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 154934613 . C . PASS END=154934621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 154934622 . G . PASS END=154934622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 154934623 . G . PASS END=154934634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 154934635 . C . PASS END=154934635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 154934636 . G . PASS END=154934637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154934638 . A . PASS END=154934638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 154934639 . A . PASS END=154934639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154934640 . C . PASS END=154934659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,71,255:26,0 chr1 154934660 . A . PASS END=154934662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr1 154934663 . C . PASS END=154934666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 154934667 . G . PASS END=154934710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:19,0 chr1 154934711 . C . PASS END=154934711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 154934712 . G . PASS END=154934722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 154934723 . A . PASS END=154934727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 154934728 . C . PASS END=154934728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 154934729 . C . PASS END=154934732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 154934733 . G . PASS END=154934745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 154936279 . T . PASS END=154936282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1157:0,93,255:31,0 chr1 154936283 . A . PASS END=154936283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 154936284 . G . PASS END=154936407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1215:0,93,255:40,0 chr1 154936566 . C . PASS END=154936666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:37:0,96,1424:0,96,255:40,0 chr1 154936667 . T . PASS END=154936667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1167:0,69,255:36,0 chr1 154936668 . C . PASS END=154936698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1266:0,84,255:38,0 chr1 154936699 . A . PASS END=154936700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:39:0,75,1125:0,117,255:26,0 chr1 154936701 . A . PASS END=154936708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,104,255:28,0 chr1 154936709 . C . PASS END=154936731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,874:0,62,255:26,0 chr1 154936732 . C . PASS END=154936742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:53:23:0,53,806:0,53,255:19,0 chr1 154936743 . G . PASS END=154936743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 154936744 . G . PASS END=154936762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 154936763 . G . PASS END=154936764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 154937845 . C . PASS END=154937846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 154937847 . A . PASS END=154937847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:33,0 chr1 154937848 . A . PASS END=154937857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:38,0 chr1 154937858 . C . PASS END=154937858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1202:0,64,255:35,0 chr1 154937859 . T . PASS END=154937914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,99,1322:0,99,255:40,0 chr1 154937915 . C . PASS END=154937949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,117,1800:0,117,255:40,0 chr1 154937950 . G . PASS END=154937950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:62:56:0,62,1527:0,62,255:40,0 chr1 154937951 . A . PASS END=154937951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 154937952 . G . LowGQ END=154937952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,11:58:0:58:0,0,1254:60,0,255:40,0 chr1 154937953 . G . PASS END=154937954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:62:58:0,62,1525:0,62,255:40,0 chr1 154937955 . A . PASS END=154937955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 154937956 . T . PASS END=154937956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,8:58:26:58:0,26,1455:0,26,255:40,0 chr1 154937957 . A . PASS END=154937989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,140,255:40,0 chr1 154937990 . C . PASS END=154938159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,99,1575:0,99,255:40,0 chr1 154938160 . G . PASS END=154938160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1377:0,51,255:37,0 chr1 154938161 . C . PASS END=154938211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:38:0,93,1443:0,93,255:40,0 chr1 154938212 . A . PASS END=154938212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:31,0 chr1 154938213 . C . PASS END=154938231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:29:0,81,1215:0,83,255:33,0 chr1 154938232 . C . PASS END=154938236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154938237 . G . PASS END=154938238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 154938239 . A . PASS END=154938239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 154938240 . G . PASS END=154938250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 154938251 . A . PASS END=154938257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 154938422 . T . PASS END=154938422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 154938423 . C . PASS END=154938433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,755:0,69,255:23,0 chr1 154938434 . G . PASS END=154938434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 154938435 . G . PASS END=154938442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:26,0 chr1 154938443 . G . PASS END=154938447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154938448 . C . PASS END=154938449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 154938450 . G . PASS END=154938470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 154938471 . G . PASS END=154938471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 154938472 . G . PASS END=154938556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1125:0,86,255:35,0 chr1 154938638 . C . PASS END=154938639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 154938640 . G . PASS END=154938640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 154938641 . G . PASS END=154938641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 154938642 . A . PASS END=154938642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 154938643 . C . PASS END=154938660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1202:0,87,255:31,0 chr1 154938661 . A . PASS END=154938661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 154938662 . T . PASS END=154938675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1103:0,90,255:30,0 chr1 154938676 . T . PASS END=154938676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 154938677 . C . PASS END=154938681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 154938682 . T . PASS END=154938682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 154938683 . C . PASS END=154938707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:28:0,83,1070:0,83,255:34,0 chr1 154938795 . C . PASS END=154938828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1208:0,83,255:33,0 chr1 154938829 . T . PASS END=154938832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 154938833 . G . PASS END=154938911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1260:0,99,255:40,0 chr1 154938912 . C . PASS END=154938912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:40:47:0,40,1110:0,40,255:40,0 chr1 154938913 . C . PASS END=154939020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,114,1800:0,114,255:40,0 chr1 154940146 . C . PASS END=154940269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1064:0,87,255:40,0 chr1 154940270 . C . PASS END=154940271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 154940272 . G . PASS END=154940273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154940456 . C . PASS END=154940507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,118,1800:0,118,255:40,0 chr1 154940680 . C . PASS END=154940733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,104,1295:0,104,255:40,0 chr1 154940971 . C . PASS END=154940972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154940973 . G . PASS END=154940974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154940975 . T . PASS END=154940975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 154940976 . T . PASS END=154940982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 154940983 . T . PASS END=154940983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 154940984 . G . PASS END=154940988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1074:0,90,255:30,0 chr1 154940989 . C . PASS END=154940990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 154940991 . T . PASS END=154941008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:30,0 chr1 154941009 . T . PASS END=154941009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:28,0 chr1 154941010 . G . PASS END=154941010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 154941011 . G . PASS END=154941040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1050:0,82,255:30,0 chr1 154941041 . A . PASS END=154941042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1007:0,73,255:27,0 chr1 154941043 . T . PASS END=154941043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154941044 . T . PASS END=154941044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 154941045 . T . PASS END=154941050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154941051 . T . PASS END=154941051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 154941052 . A . PASS END=154941055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 154941056 . C . PASS END=154941057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154941058 . C . PASS END=154941058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 154941059 . C . PASS END=154941071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 154941072 . T . PASS END=154941072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:25,0 chr1 154941073 . G . PASS END=154941090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 154941247 . C . PASS END=154941283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,64,255:26,0 chr1 154941284 . G . PASS END=154941307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:16:0,40,635:0,40,255:19,0 chr1 154941308 . T . PASS END=154941308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 154941309 . C . PASS END=154941310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 154941854 . C . PASS END=154941864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,886:0,75,255:25,0 chr1 154941865 . A . PASS END=154941865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 154941866 . G . PASS END=154941869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 154941870 . G . PASS END=154941870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 154941871 . G . PASS END=154941903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,869:0,61,255:25,0 chr1 154941904 . G . PASS END=154941919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:18:0,51,765:0,54,255:18,0 chr1 154941920 . A . PASS END=154941920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:14,0 chr1 154941921 . T . PASS END=154941924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 154942508 . C . PASS END=154942509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 154942510 . G . PASS END=154942510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 154942511 . A . PASS END=154942515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 154942516 . A . PASS END=154942526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 154942527 . C . PASS END=154942547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 154942548 . T . PASS END=154942594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 154942595 . G . PASS END=154942611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:8:0,21,315:0,24,255:9,0 chr1 154942612 . C . PASS END=154942615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 154942616 . A . PASS END=154942632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 154942633 . C . PASS END=154942699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:13,0 chr1 154942700 . G . PASS END=154942700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 154942701 . T . PASS END=154942724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,443:0,39,255:13,0 chr1 154942725 . C . PASS END=154942725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 154942726 . C . PASS END=154942726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 154942727 . C . PASS END=154942736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 154942737 . T . PASS END=154942737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 154942738 . C . PASS END=154942757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 154942758 . C . PASS END=154942764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 154942765 . A . PASS END=154942766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 154942767 . C . PASS END=154942769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154942770 . G . PASS END=154942770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:13,0 chr1 154942771 . G . PASS END=154942772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 154942773 . C . PASS END=154942773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,513:0,12,255:13,0 chr1 154942774 . G . PASS END=154942777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 154942778 . C . PASS END=154942794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr1 154942795 . G . PASS END=154942848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,521:0,45,255:19,0 chr1 154942849 . C . PASS END=154942849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:19,0 chr1 154942850 . C . PASS END=154942851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154942852 . C . PASS END=154942852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 154942853 . A . PASS END=154942863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:23,0 chr1 154942864 . G . PASS END=154942867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,855:0,56,255:19,0 chr1 154942868 . G . PASS END=154942869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 154942870 . T . PASS END=154942880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,696:0,44,255:19,0 chr1 154942881 . G . PASS END=154942885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 154942886 . A . PASS END=154942886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 154942887 . G . PASS END=154942891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 154942892 . T . PASS END=154942892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 154942893 . G . PASS END=154942965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,815:0,61,255:26,0 chr1 154942966 . G . PASS END=154942975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 154942976 . C . PASS END=154942977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 154942978 . T . PASS END=154942991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:18,0 chr1 154942992 . A . PASS END=154942992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,512:0,21,255:14,0 chr1 154942993 . G . PASS END=154942994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 154942995 . A . PASS END=154942995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 154942996 . G . PASS END=154942996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 154942997 . A . PASS END=154942999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,585:0,37,255:13,0 chr1 154943000 . C . PASS END=154943002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 154947222 . A . PASS END=154947232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,922:0,69,255:24,0 chr1 154947233 . A . PASS END=154947233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:23,0 chr1 154947234 . C . PASS END=154947251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,796:0,78,255:26,0 chr1 154947252 . A . PASS END=154947262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,979:0,87,255:29,0 chr1 154947263 . C . PASS END=154947280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,922:0,62,255:25,0 chr1 154947378 . A . PASS END=154947388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:34:0,87,1247:0,89,255:32,0 chr1 154950463 . A . PASS END=154950607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:48:0,120,1800:0,144,255:40,0 chr1 154951201 . A . PASS END=154951253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,134,255:40,0 chr1 154956171 . A . PASS END=154956217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,607:0,49,255:19,0 chr1 154956218 . G . PASS END=154956229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:23,0 chr1 154956230 . A . PASS END=154956230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 154956231 . A . PASS END=154956252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 154956253 . G . PASS END=154956254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 154956255 . G . PASS END=154956260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 154956261 . C . PASS END=154956261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 154956262 . T . PASS END=154956265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 154956266 . A . PASS END=154956289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,714:0,47,255:19,0 chr1 154956290 . C . PASS END=154956292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154956293 . C . PASS END=154956293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 154956294 . C . PASS END=154956298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr1 154956299 . T . PASS END=154956299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 154956300 . C . PASS END=154956323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 154956324 . T . PASS END=154956336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,731:0,49,255:19,0 chr1 154956337 . C . PASS END=154956337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr1 154956338 . C . PASS END=154956353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,590:0,40,255:19,0 chr1 154956354 . G . PASS END=154956359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:16:0,39,585:0,48,255:13,0 chr1 154956360 . C . PASS END=154956363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154956364 . G . PASS END=154956365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 154956366 . C . PASS END=154956375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 154956376 . T . PASS END=154956376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 154956377 . G . PASS END=154956389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 154956390 . T . PASS END=154956390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 154956391 . G . PASS END=154956404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,492:0,45,255:17,0 chr1 154956405 . T . PASS END=154956405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,519:0,34,255:16,0 chr1 154956406 . T . PASS END=154956406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,574:0,51,255:17,0 chr1 154956407 . T . PASS END=154956407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr1 154956408 . G . PASS END=154956443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,629:0,40,255:18,0 chr1 154956444 . G . PASS END=154956444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 154956445 . G . PASS END=154956451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 154956452 . A . PASS END=154956452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 154956453 . G . PASS END=154956469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,552:0,48,255:17,0 chr1 154956470 . T . PASS END=154956470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 154956471 . A . PASS END=154956478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 154956479 . T . PASS END=154956479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 154956480 . G . PASS END=154956482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 154956483 . C . PASS END=154956483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 154956484 . T . PASS END=154956488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 154956489 . C . PASS END=154956489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:15,0 chr1 154956490 . C . PASS END=154956507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,552:0,48,255:16,0 chr1 154956508 . C . PASS END=154956508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr1 154956509 . T . PASS END=154956513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 154956514 . T . PASS END=154956514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 154956515 . C . PASS END=154956515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 154956516 . A . PASS END=154956516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,491:0,34,255:14,0 chr1 154956517 . T . PASS END=154956517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 154956518 . C . PASS END=154956518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 154956519 . A . PASS END=154956520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 154956521 . T . PASS END=154956521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 154956522 . G . PASS END=154956522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 154956523 . T . PASS END=154956523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,501:0,37,255:15,0 chr1 154956524 . T . PASS END=154956525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 154956526 . G . PASS END=154956526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 154956527 . A . PASS END=154956529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 154956530 . T . PASS END=154956530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 154956531 . G . PASS END=154956533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 154956534 . A . PASS END=154956536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,492:0,32,255:14,0 chr1 154956537 . C . PASS END=154956539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154956540 . A . PASS END=154956542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 154960506 . A . PASS END=154960513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 154960514 . A . PASS END=154960514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 154960515 . T . PASS END=154960516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 154960517 . A . PASS END=154960517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 154960518 . T . PASS END=154960518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154960519 . C . PASS END=154960522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154960523 . A . PASS END=154960524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 154960525 . C . PASS END=154960533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 154960534 . T . PASS END=154960534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:13,0 chr1 154960535 . T . PASS END=154960540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:18,0 chr1 154960541 . C . PASS END=154960541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 154960542 . T . PASS END=154960545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr1 154960546 . G . PASS END=154960550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 154960551 . G . PASS END=154960551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 154960552 . A . PASS END=154960554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 154960555 . G . PASS END=154960560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154960561 . T . PASS END=154960561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr1 154960562 . C . PASS END=154960568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,955:0,78,255:26,0 chr1 154960569 . T . PASS END=154960569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr1 154960570 . T . PASS END=154960574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 154960575 . C . PASS END=154960593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,994:0,80,255:34,0 chr1 154960594 . A . PASS END=154960594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr1 154960595 . C . PASS END=154960602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1134:0,85,255:34,0 chr1 154960603 . C . PASS END=154960603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:32,0 chr1 154960604 . C . PASS END=154960630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:35,0 chr1 154960631 . C . PASS END=154960631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:26,0 chr1 154960632 . C . PASS END=154960644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:27:0,74,1047:0,74,255:26,0 chr1 154960645 . T . PASS END=154960647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 154960648 . G . PASS END=154960648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 154960649 . C . PASS END=154960653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 154960654 . T . PASS END=154960679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,911:0,68,255:26,0 chr1 154960680 . A . PASS END=154960685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 154960686 . G . PASS END=154960692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1100:0,74,255:26,0 chr1 154960693 . A . PASS END=154960697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1163:0,87,255:30,0 chr1 154960698 . A . PASS END=154960698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 154960699 . C . PASS END=154960704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154960705 . T . PASS END=154960705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,896:0,73,255:28,0 chr1 154960706 . C . PASS END=154960713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1013:0,90,255:30,0 chr1 154960714 . G . PASS END=154960714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 154960715 . C . PASS END=154960724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1172:0,93,255:31,0 chr1 154960725 . G . PASS END=154960751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 154960752 . A . PASS END=154960761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 154960762 . A . PASS END=154960767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 154960768 . C . PASS END=154960768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154960769 . C . PASS END=154960773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154960774 . A . PASS END=154960774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154960775 . G . PASS END=154960781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 154960782 . G . PASS END=154960784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 154960785 . C . PASS END=154960787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1100:0,74,255:26,0 chr1 154960788 . G . PASS END=154960792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 154960793 . T . PASS END=154960793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 154960794 . G . PASS END=154960801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1247:0,96,255:33,0 chr1 154960802 . G . PASS END=154960802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:30,0 chr1 154960803 . C . PASS END=154960829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1186:0,86,255:34,0 chr1 154960830 . G . PASS END=154960838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,80,255:26,0 chr1 154960839 . G . PASS END=154960847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 154960848 . G . PASS END=154960857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 154960858 . G . PASS END=154960858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154960859 . G . PASS END=154960859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154960860 . G . PASS END=154960861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 154960862 . G . PASS END=154960862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154960863 . A . PASS END=154960907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1180:0,84,255:31,0 chr1 154960908 . G . PASS END=154960909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154960910 . T . PASS END=154960928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 154960929 . T . PASS END=154960932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr1 154960933 . G . PASS END=154960933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154960934 . A . PASS END=154960938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 154960939 . C . PASS END=154960947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:29,0 chr1 154960948 . C . PASS END=154960948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 154960949 . C . PASS END=154961042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1102:0,87,255:35,0 chr1 154961043 . T . PASS END=154961055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 154961056 . A . PASS END=154961059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 154961060 . A . PASS END=154961135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,64,255:24,0 chr1 154961136 . C . PASS END=154961136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 154961137 . T . PASS END=154961148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 154961149 . C . PASS END=154961158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 154961159 . C . PASS END=154961159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 154961160 . A . PASS END=154961168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 154961169 . T . PASS END=154961169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1052:0,79,255:28,0 chr1 154961170 . A . PASS END=154961173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 154961174 . G . PASS END=154961174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 154961175 . G . PASS END=154961181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 154961182 . T . PASS END=154961182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 154961183 . G . PASS END=154961270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1133:0,90,255:37,0 chr1 154961271 . A . PASS END=154961321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,776:0,66,255:25,0 chr1 154961322 . T . PASS END=154961325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,774:0,50,255:19,0 chr1 154961326 . G . PASS END=154961327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154961328 . A . PASS END=154961328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 154961329 . G . PASS END=154961329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:16,0 chr1 154961330 . G . PASS END=154961352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,560:0,48,255:17,0 chr1 154961353 . A . PASS END=154961353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 154961354 . T . PASS END=154961359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 154961360 . A . PASS END=154961362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 154961363 . C . PASS END=154961375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:15,0 chr1 154961376 . C . PASS END=154961376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 154961377 . C . PASS END=154961379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 154961380 . G . PASS END=154961390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 154962036 . G . PASS END=154962036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154962037 . G . PASS END=154962047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:22,0 chr1 154962048 . G . PASS END=154962048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 154962049 . G . PASS END=154962052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154962053 . A . PASS END=154962053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 154962054 . A . PASS END=154962056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154962057 . T . PASS END=154962057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 154962058 . G . PASS END=154962074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,770:0,63,255:26,0 chr1 154962075 . C . PASS END=154962075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154962076 . C . PASS END=154962076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 154962077 . A . PASS END=154962089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1119:0,90,255:30,0 chr1 154962090 . T . PASS END=154962090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 154962091 . G . PASS END=154962093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154962094 . T . PASS END=154962094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 154962095 . C . PASS END=154962102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 154962103 . C . PASS END=154962164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 154962165 . T . PASS END=154962165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 154962166 . C . PASS END=154962166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154962167 . C . PASS END=154962183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,50,255:19,0 chr1 154962635 . G . PASS END=154962636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1001:0,71,255:28,0 chr1 154962637 . A . PASS END=154962740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:32:0,83,1186:0,83,255:40,0 chr1 154962815 . G . PASS END=154962854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,89,255:33,0 chr1 154962855 . C . PASS END=154962857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154962858 . G . PASS END=154962863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 154962864 . G . PASS END=154962867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 154962868 . A . PASS END=154962868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:23,0 chr1 154962869 . A . PASS END=154962874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 154962875 . G . PASS END=154962882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 154962883 . A . PASS END=154962883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 154962884 . C . PASS END=154962886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154962887 . C . PASS END=154962913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,953:0,62,255:26,0 chr1 154962914 . C . PASS END=154962915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154962916 . G . PASS END=154962928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr1 154962929 . C . PASS END=154962929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr1 154962930 . T . PASS END=154962933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 154962934 . C . PASS END=154962947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 154962948 . C . PASS END=154962948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 154962949 . C . PASS END=154962975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 154962976 . C . PASS END=154962993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,992:0,65,255:25,0 chr1 154962994 . A . PASS END=154962994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 154962995 . C . PASS END=154962999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 154963000 . T . PASS END=154963000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 154963001 . G . PASS END=154963004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154965041 . A . PASS END=154965046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 154965047 . C . PASS END=154965064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,576:0,41,255:19,0 chr1 154965065 . T . PASS END=154965078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:22,0 chr1 154965079 . T . PASS END=154965079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 154965080 . C . PASS END=154965084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,878:0,69,255:24,0 chr1 154965085 . G . PASS END=154965085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 154965086 . C . PASS END=154965089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,801:0,72,255:24,0 chr1 154965090 . G . PASS END=154965090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 154965091 . G . PASS END=154965107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 154965108 . G . PASS END=154965108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154965109 . A . PASS END=154965109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:26,0 chr1 154965110 . T . PASS END=154965113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 154965114 . C . PASS END=154965114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 154965115 . C . PASS END=154965138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,90,255:40,0 chr1 154965189 . G . PASS END=154965266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,111,1665:0,150,255:40,0 chr1 154965378 . A . PASS END=154965379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:24,0 chr1 154965380 . A . PASS END=154965380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:23,0 chr1 154965381 . C . PASS END=154965386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 154965387 . A . PASS END=154965387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 154965388 . C . PASS END=154965394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,955:0,75,255:26,0 chr1 154965395 . G . PASS END=154965395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 154965396 . T . PASS END=154965396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:4:27:0,4,869:0,4,255:25,0 chr1 154965397 . C . PASS END=154965397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 154965398 . G . PASS END=154965404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 154965405 . T . PASS END=154965408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr1 154965409 . G . PASS END=154965410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154965411 . G . PASS END=154965412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1064:0,62,255:27,0 chr1 154965413 . G . PASS END=154965413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154965414 . G . PASS END=154965414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr1 154965415 . A . PASS END=154965415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154965416 . A . PASS END=154965418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154965419 . C . PASS END=154965420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154965421 . G . PASS END=154965421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 154965422 . C . PASS END=154965422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 154965423 . C . PASS END=154965426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 154965427 . A . PASS END=154965457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 154965458 . A . PASS END=154965458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:20,0 chr1 154965459 . C . PASS END=154965464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr1 154965465 . A . PASS END=154965465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 154965466 . G . PASS END=154965466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154965467 . C . PASS END=154965492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,552:0,47,255:19,0 chr1 154965493 . G . PASS END=154965493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 154965494 . A . PASS END=154965495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 154965496 . C . PASS END=154965496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 154965497 . G . PASS END=154965502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 154965503 . C . PASS END=154965513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 154966084 . A . PASS END=154966090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 154966091 . C . PASS END=154966099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 154966100 . A . PASS END=154966100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 154966101 . G . PASS END=154966101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 154966102 . C . PASS END=154966102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 154966103 . C . PASS END=154966113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:19,0 chr1 154966114 . A . PASS END=154966118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 154966119 . A . PASS END=154966119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 154966120 . C . PASS END=154966121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 154966122 . C . PASS END=154966122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 154966123 . T . PASS END=154966123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 154966124 . T . PASS END=154966124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr1 154966125 . C . PASS END=154966133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 154966134 . A . PASS END=154966134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 154966135 . G . PASS END=154966158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:25,0 chr1 154966159 . C . PASS END=154966159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 154966160 . G . PASS END=154966185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:26,0 chr1 154966186 . G . PASS END=154966198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 154966199 . T . PASS END=154966230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:26,0 chr1 154966231 . C . PASS END=154966242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr1 154966243 . T . PASS END=154966249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:16:0,30,450:0,48,255:11,0 chr1 154966250 . T . PASS END=154966253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:27:14:0,27,405:0,28,255:9,0 chr1 154966254 . G . PASS END=154966262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 154966263 . G . PASS END=154966269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 154983225 . A . PASS END=154983238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:12,0 chr1 154983239 . A . PASS END=154983239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,305:0,19,255:11,0 chr1 154983240 . C . PASS END=154983255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,368:0,36,255:13,0 chr1 154983256 . C . PASS END=154983257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:12,0 chr1 154983258 . G . PASS END=154983258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 154983259 . G . PASS END=154983262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154983263 . A . PASS END=154983263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 154983264 . G . PASS END=154983264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:13,0 chr1 154983265 . A . PASS END=154983267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 154983268 . C . PASS END=154983270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr1 154983271 . A . PASS END=154983272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154983273 . G . PASS END=154983273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 154983274 . C . PASS END=154983274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154983275 . T . PASS END=154983291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,459:0,31,255:13,0 chr1 154983292 . G . PASS END=154983292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 154983293 . G . PASS END=154983294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 154983295 . G . PASS END=154983295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 154983296 . G . PASS END=154983296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 154983297 . A . PASS END=154983297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:13,0 chr1 154983298 . G . PASS END=154983298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 154983299 . G . PASS END=154983299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 154983300 . G . PASS END=154983304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 154983305 . A . PASS END=154983305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 154983306 . G . PASS END=154983308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 154983309 . G . PASS END=154983309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 154983310 . A . PASS END=154983324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,629:0,40,255:18,0 chr1 154983325 . A . PASS END=154983325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 154983326 . G . PASS END=154983334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 154983335 . A . PASS END=154983335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 154983336 . G . PASS END=154983347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 154983348 . G . PASS END=154983348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 154983349 . G . PASS END=154983350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 154983351 . G . PASS END=154983356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 154983357 . G . PASS END=154983357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 154983358 . G . PASS END=154983361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 154983362 . A . PASS END=154983365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,701:0,49,255:20,0 chr1 154983366 . T . PASS END=154983367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154983368 . A . PASS END=154983368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 154983369 . G . PASS END=154983372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 154983373 . T . PASS END=154983373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 154983374 . C . PASS END=154983376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 154983377 . C . PASS END=154983377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 154983378 . A . PASS END=154983380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 154983381 . A . PASS END=154983381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 154983382 . T . PASS END=154983389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 154983390 . A . PASS END=154983390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 154983391 . G . PASS END=154983392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154983393 . A . PASS END=154983400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 154983401 . A . PASS END=154983401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:14,0 chr1 154983402 . C . PASS END=154983416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 154983417 . C . PASS END=154983417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:17,0 chr1 154983418 . C . PASS END=154983438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,598:0,48,255:18,0 chr1 154983439 . C . PASS END=154983451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,540:0,31,255:13,0 chr1 154983452 . C . PASS END=154983452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 154983453 . T . PASS END=154983464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 154983465 . T . PASS END=154983465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 154983466 . C . PASS END=154983474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 154983475 . C . PASS END=154983475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 154983476 . C . PASS END=154983480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr1 154983481 . A . PASS END=154983483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 154983484 . G . PASS END=154983488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 154983489 . G . PASS END=154983491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:14:0,21,315:0,42,255:7,0 chr1 154987131 . G . PASS END=154987134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,779:0,66,255:23,0 chr1 154987135 . A . PASS END=154987135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 154987136 . G . PASS END=154987136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 154987137 . A . PASS END=154987137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 154987138 . T . PASS END=154987138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 154987139 . G . PASS END=154987139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 154987140 . G . PASS END=154987154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,860:0,69,255:26,0 chr1 154987155 . G . PASS END=154987175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 154987176 . C . PASS END=154987205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,969:0,68,255:25,0 chr1 154987206 . C . PASS END=154987207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 154987208 . C . PASS END=154987209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 154987210 . A . PASS END=154987211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 154987212 . G . PASS END=154987238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,886:0,61,255:25,0 chr1 154987239 . G . PASS END=154987252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 154987253 . G . PASS END=154987258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 154987259 . G . PASS END=154987259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154987260 . G . PASS END=154987260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154987261 . G . PASS END=154987262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 154987263 . C . PASS END=154987276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 154987277 . C . PASS END=154987277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 154987278 . C . PASS END=154987278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154987279 . A . PASS END=154987279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 154987280 . C . PASS END=154987282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154987283 . G . PASS END=154987288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 154987289 . G . PASS END=154987289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 154987290 . C . PASS END=154987303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 154987304 . C . PASS END=154987309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 154987310 . C . PASS END=154987310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 154987311 . T . PASS END=154987316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 154987317 . A . PASS END=154987336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,652:0,43,255:19,0 chr1 154987337 . T . PASS END=154987363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:23,0 chr1 154987364 . T . PASS END=154987364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 154987365 . A . PASS END=154987368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:23,0 chr1 154987369 . G . PASS END=154987369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 154987370 . G . PASS END=154987377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 154987378 . C . PASS END=154987378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 154987379 . T . PASS END=154987416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,65,255:24,0 chr1 154987417 . T . PASS END=154987424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 154987425 . G . PASS END=154987426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154987427 . G . PASS END=154987427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 154987428 . G . PASS END=154987452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 154987453 . C . PASS END=154987453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 154987454 . C . PASS END=154987454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 154987455 . T . PASS END=154987488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,776:0,66,255:23,0 chr1 154987489 . T . PASS END=154987490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154987491 . C . PASS END=154987494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 154987495 . C . PASS END=154987495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 154987496 . T . PASS END=154987524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:19,0 chr1 154987525 . T . PASS END=154987525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154987526 . C T, 45.30 PASS DP=23;MQ=250.00;MQRankSum=3.841;ReadPosRankSum=1.711;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:10,3,0:5,5,0:45:80,0,50,286,523,810:241,0,255:14,0:4.5301e+01,1.4988e-04,5.3000e+01,2.8613e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,4,4:10,5,5,3 chr1 154987527 . C . PASS END=154987529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 154987530 . T . PASS END=154987548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 154987549 . T . PASS END=154987554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 154987555 . T . PASS END=154987555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:19,0 chr1 154987556 . T . PASS END=154987559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 154987560 . C . PASS END=154987563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 154987564 . G . PASS END=154987628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,507:0,45,255:18,0 chr1 154987629 . G . PASS END=154987630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,565:0,32,255:15,0 chr1 154987631 . C . PASS END=154987631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 154987632 . T . PASS END=154987632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:15,0 chr1 154987633 . T . PASS END=154987647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:19,0 chr1 154987648 . C . PASS END=154987652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 154987653 . G . PASS END=154987657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 154987658 . T . PASS END=154987659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154987660 . C . PASS END=154987661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 154987662 . A . PASS END=154987662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 154987663 . A . PASS END=154987668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:17,0 chr1 154987669 . A . PASS END=154987669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:15,0 chr1 154987670 . A . PASS END=154987714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,653:0,43,255:19,0 chr1 154987715 . A . PASS END=154987735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:23,0 chr1 154987736 . C . PASS END=154987736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 154987737 . A . PASS END=154987771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,749:0,61,255:26,0 chr1 154987772 . G . PASS END=154987772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr1 154987773 . G . PASS END=154987774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:24,0 chr1 154987775 . G . PASS END=154987775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 154987776 . G . PASS END=154987782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,947:0,67,255:27,0 chr1 154987783 . C . PASS END=154987785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 154987786 . A . PASS END=154987808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 154987809 . A . PASS END=154987839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:18:0,43,675:0,43,255:19,0 chr1 154987840 . A . PASS END=154987840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:18,0 chr1 154987841 . G . PASS END=154987843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,767:0,50,255:19,0 chr1 154987844 . G . PASS END=154987844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154987845 . G . PASS END=154987845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:18,0 chr1 154987846 . A . PASS END=154987846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 154987847 . G . PASS END=154987847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,709:0,35,255:19,0 chr1 154987848 . G . PASS END=154987849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154987850 . G . PASS END=154987850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 154987851 . G . PASS END=154987851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 154987852 . C . PASS END=154987852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 154987853 . G . PASS END=154987868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,637:0,41,255:19,0 chr1 154987869 . A . PASS END=154987869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:16,0 chr1 154987870 . G . PASS END=154987870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 154987871 . T . PASS END=154987873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 154987874 . G . PASS END=154987874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 154987875 . G . PASS END=154987875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 154987876 . G . PASS END=154987876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 154987877 . C . PASS END=154987877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 154987878 . A . PASS END=154987878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 154987879 . G . PASS END=154987879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:16,0 chr1 154987880 . T . PASS END=154987888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:17,0 chr1 154987889 . G . PASS END=154987889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 154987890 . G . PASS END=154987903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,615:0,40,255:18,0 chr1 154987904 . T . PASS END=154987904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 154987905 . C . PASS END=154987908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 154987909 . C . PASS END=154987909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 154987910 . A . PASS END=154987927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 154987928 . T . PASS END=154987928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:16,0 chr1 154987929 . G . PASS END=154987933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 154987934 . T . PASS END=154987934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 154987935 . C . PASS END=154987944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,609:0,43,255:18,0 chr1 154987945 . A . PASS END=154987945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 154987946 . C . PASS END=154987957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,607:0,41,255:19,0 chr1 154987958 . G . PASS END=154987958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 154987959 . G . PASS END=154987959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:18,0 chr1 154987960 . G . PASS END=154987960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 154987961 . T . PASS END=154987961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,593:0,43,255:19,0 chr1 154987962 . G . PASS END=154987962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 154987963 . A . PASS END=154987964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 154987965 . G . PASS END=154987965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 154987966 . A . PASS END=154987968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 154987969 . A . PASS END=154987969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:17,0 chr1 154987970 . A . PASS END=154987974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 154987975 . A . PASS END=154987975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,568:0,27,255:14,0 chr1 154987976 . G . PASS END=154987985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,562:0,40,255:16,0 chr1 154987986 . T . PASS END=154987986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,527:0,21,255:14,0 chr1 154987987 . A . PASS END=154987988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 154987989 . C . PASS END=154988034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,576:0,40,255:17,0 chr1 154988035 . C . PASS END=154988035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 154988036 . A . PASS END=154988060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,668:0,51,255:18,0 chr1 154988061 . G . PASS END=154988061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 154988062 . C . PASS END=154988067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 154988068 . A . PASS END=154988071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 154988072 . T . PASS END=154988072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 154988073 . G . PASS END=154988077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,829:0,66,255:22,0 chr1 154988078 . G . PASS END=154988078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 154988079 . A . PASS END=154988105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,825:0,66,255:23,0 chr1 154988106 . G . PASS END=154988107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 154988108 . C . PASS END=154988150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,784:0,63,255:25,0 chr1 154988151 . A . PASS END=154988151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 154988152 . A . PASS END=154988158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,978:0,74,255:26,0 chr1 154988159 . C . PASS END=154988164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 154988165 . G . PASS END=154988165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 154988166 . A . PASS END=154988170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:28,0 chr1 154988171 . T . PASS END=154988173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154988174 . G . PASS END=154988176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 154988177 . G . PASS END=154988180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 154988181 . C . PASS END=154988186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154988187 . T . PASS END=154988187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 154988188 . G . PASS END=154988203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,956:0,81,255:30,0 chr1 154988204 . T . PASS END=154988204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:27,0 chr1 154988205 . G . PASS END=154988215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 154988216 . A . PASS END=154988216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 154988217 . C . PASS END=154988226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 154988227 . A . PASS END=154988227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 154988228 . C . PASS END=154988266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1103:0,93,255:34,0 chr1 154988267 . G . PASS END=154988289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,939:0,75,255:26,0 chr1 154988290 . G . PASS END=154988290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 154988696 . G . PASS END=154988698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr1 154988699 . C . PASS END=154988699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:21,0 chr1 154988700 . G . PASS END=154988701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 154988702 . C . PASS END=154988711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 154988712 . A . PASS END=154988712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 154988713 . T . PASS END=154988722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 154988723 . G . PASS END=154988723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 154988724 . A . PASS END=154988724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 154988725 . A . PASS END=154988725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 154988726 . G . PASS END=154988755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 154988756 . G . PASS END=154988756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154988757 . C . PASS END=154988757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 154988758 . A . PASS END=154988764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 154988765 . A . PASS END=154988770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154988771 . C . PASS END=154988772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 154988773 . T . PASS END=154988773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:26,0 chr1 154988774 . C . PASS END=154988801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:29,0 chr1 154988802 . A . PASS END=154988810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr1 154988811 . C . PASS END=154988868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1057:0,83,255:32,0 chr1 154988869 . A . PASS END=154988886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,895:0,65,255:26,0 chr1 154988887 . T . PASS END=154988887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154988888 . C . PASS END=154988900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,74,255:26,0 chr1 154988901 . T . PASS END=154988901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:26,0 chr1 154988902 . G . PASS END=154988902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 154988903 . C . PASS END=154988913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:31,0 chr1 154988914 . G . PASS END=154988915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 154988916 . A . PASS END=154988919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 154988920 . G . PASS END=154988937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:29,0 chr1 154988938 . A . PASS END=154988938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 154988939 . T . PASS END=154988939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154988940 . G . PASS END=154988940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 154988941 . C . PASS END=154988941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154988942 . A . PASS END=154988945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1062:0,74,255:28,0 chr1 154988946 . C . PASS END=154988946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 154988947 . C . PASS END=154988956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1031:0,71,255:26,0 chr1 154988957 . A G, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=2.252;FractionInformativeReads=0.966;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,16,0:0.571,0.000:28:7,10,0:5,6,0:48:85,0,49,535,392,928:255,0,255:10,0:5.0000e+01,7.2740e-05,5.1719e+01,4.5000e+02,4.2701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,7,9:7,5,7,9 chr1 154988958 . C . PASS END=154988994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,939:0,65,255:26,0 chr1 154988995 . A . PASS END=154989014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:26,0 chr1 154989015 . G . PASS END=154989015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154989016 . A . PASS END=154989016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 154989017 . C . PASS END=154989017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 154989018 . A . PASS END=154989020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,955:0,67,255:26,0 chr1 154989021 . T . PASS END=154989025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154989026 . C . PASS END=154989038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 154989039 . C . PASS END=154989039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:24,0 chr1 154989040 . G . PASS END=154989045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 154989046 . G . PASS END=154989046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr1 154989047 . G . PASS END=154989064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,886:0,72,255:26,0 chr1 154989065 . T . PASS END=154989065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 154989066 . G . PASS END=154989070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 154989071 . C . PASS END=154989071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 154989072 . C . PASS END=154989075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 154989076 . T . PASS END=154989076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 154989077 . C . PASS END=154989077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 154989078 . T . PASS END=154989078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:21,0 chr1 154989079 . C . PASS END=154989089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 154989090 . C . PASS END=154989090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 154989091 . C . PASS END=154989099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154989100 . A . PASS END=154989120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 154989121 . C . PASS END=154989121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:13,0 chr1 154989122 . C . PASS END=154989126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr1 154989127 . C . PASS END=154989140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,482:0,39,255:13,0 chr1 154989141 . G . PASS END=154989159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 154989160 . A . PASS END=154989161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 154991020 . T . PASS END=154991020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr1 154991021 . T . PASS END=154991022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 154991023 . T . PASS END=154991023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 154991024 . T . PASS END=154991024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:15,0 chr1 154991025 . T . PASS END=154991025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr1 154991026 . G . PASS END=154991026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr1 154991027 . G . LowGQ END=154991027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:14,0 chr1 154991028 . G . PASS END=154991034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:16:0,12,543:0,12,255:17,0 chr1 154991035 . G . PASS END=154991036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:18,0 chr1 154991037 . G . PASS END=154991037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 154991038 . G . PASS END=154991038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:18,0 chr1 154991039 . G . PASS END=154991039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:17,0 chr1 154991040 . A . PASS END=154991041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr1 154991042 . G . PASS END=154991047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,706:0,24,255:21,0 chr1 154991048 . G . PASS END=154991048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 154991049 . G . PASS END=154991050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr1 154991051 . A . LowGQ END=154991051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,698:14,0,255:21,0 chr1 154991052 . G . PASS END=154991053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:23,0 chr1 154991054 . G . PASS END=154991054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 154991055 . A . LowGQ END=154991055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,644:0,0,255:21,0 chr1 154991056 . G . PASS END=154991057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 154991058 . G . PASS END=154991058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,783:0,25,255:22,0 chr1 154991059 . A . PASS END=154991059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 154991060 . G . PASS END=154991061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 154991062 . T . PASS END=154991062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:24,0 chr1 154991063 . G . PASS END=154991066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,879:0,61,255:26,0 chr1 154991067 . G . PASS END=154991067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,816:0,31,255:24,0 chr1 154991068 . A . PASS END=154991070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,839:0,61,255:27,0 chr1 154991071 . G . PASS END=154991073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 154991074 . T . PASS END=154991074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 154991075 . G . PASS END=154991076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 154991077 . G . PASS END=154991077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 154991078 . G . PASS END=154991079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154991080 . T . PASS END=154991081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,892:0,40,255:27,0 chr1 154991082 . C . PASS END=154991082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 154991083 . T . PASS END=154991083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 154991084 . G . PASS END=154991087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 154991088 . C . PASS END=154991089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:30,0 chr1 154991090 . G . PASS END=154991098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1180:0,83,255:32,0 chr1 154991099 . G . PASS END=154991099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr1 154991100 . C . PASS END=154991111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1197:0,86,255:34,0 chr1 154991112 . C . PASS END=154991112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:32,0 chr1 154991113 . G . PASS END=154991181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:34:0,91,1374:0,91,255:40,0 chr1 154991182 . T . PASS END=154991182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1496:0,71,255:35,0 chr1 154991183 . A . PASS END=154991185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:37,0 chr1 154991186 . G . PASS END=154991186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:36,0 chr1 154991187 . G . PASS END=154991208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,89,255:37,0 chr1 154991209 . C . PASS END=154991229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,63,255:26,0 chr1 154991230 . C . PASS END=154991236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:17,0 chr1 154995593 . C . PASS END=154995594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 154995595 . G . PASS END=154995611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr1 154995612 . C . PASS END=154995612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 154995613 . C . PASS END=154995635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,607:0,41,255:19,0 chr1 154995636 . C . PASS END=154995647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,717:0,60,255:21,0 chr1 154995648 . G . PASS END=154995653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 154995654 . G . PASS END=154995654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154995655 . C . PASS END=154995655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 154995656 . A . PASS END=154995660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 154995661 . C . PASS END=154995661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 154995662 . C . PASS END=154995733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,781:0,69,255:24,0 chr1 154995840 . A . PASS END=154995933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:91:32:0,91,1327:0,91,255:40,0 chr1 154996047 . T . PASS END=154996054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:33:0,88,1197:0,88,255:35,0 chr1 154996055 . T . PASS END=154996055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 154996056 . G . PASS END=154996096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:36:0,81,1308:0,81,255:40,0 chr1 154996308 . C . PASS END=154996308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154996309 . T . PASS END=154996309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 154996310 . T . PASS END=154996325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 154996326 . T . PASS END=154996326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 154996327 . G . PASS END=154996333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 154996334 . A . PASS END=154996395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,637:0,48,255:19,0 chr1 154996396 . C . PASS END=154996396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 154996397 . A . PASS END=154996416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr1 154996417 . T . PASS END=154996431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 154996432 . G . PASS END=154996435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 154996948 . C . PASS END=154996968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:15:0,40,551:0,40,255:19,0 chr1 154996969 . G . PASS END=154996974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:24,0 chr1 154996975 . C . PASS END=154996975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 154996976 . T . PASS END=154996979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 154996980 . G . PASS END=154997009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr1 154997010 . T . PASS END=154997060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,864:0,61,255:26,0 chr1 154997061 . C . PASS END=154997078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:19,0 chr1 154998778 . C . PASS END=154998792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,856:0,69,255:25,0 chr1 154998793 . G . PASS END=154998822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 154998823 . C . PASS END=154998830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 154998831 . C . PASS END=154998838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 154998839 . C . PASS END=154998857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,986:0,78,255:26,0 chr1 154998858 . A . PASS END=154998861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 154998862 . T . PASS END=154998878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 154999024 . C . PASS END=154999029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 154999030 . C . PASS END=154999191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:30:0,85,1166:0,85,255:40,0 chr1 155001709 . T . PASS END=155001873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:31:0,83,1189:0,83,255:40,0 chr1 155002560 . C . PASS END=155002567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:19,0 chr1 155002568 . A . PASS END=155002595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:26,0 chr1 155002596 . G . PASS END=155002687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1047:0,80,255:33,0 chr1 155002688 . T . PASS END=155002688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1068:0,63,255:29,0 chr1 155002689 . T . PASS END=155002698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1186:0,93,255:31,0 chr1 155002699 . A . PASS END=155002699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 155002700 . T . PASS END=155002702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 155002703 . C . PASS END=155002717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1015:0,71,255:26,0 chr1 155002908 . T . PASS END=155003054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:33:0,84,1223:0,84,255:40,0 chr1 155003055 . A . PASS END=155003055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1730:0,76,255:40,0 chr1 155003056 . A . PASS END=155003121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:82:40:0,82,1449:0,82,255:40,0 chr1 155003645 . G . PASS END=155003650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:30,0 chr1 155003651 . C . PASS END=155003651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 155003652 . G . PASS END=155003710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:30:0,85,1053:0,85,255:36,0 chr1 155004050 . G . PASS END=155004050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:22,0 chr1 155004051 . G . PASS END=155004051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 155004052 . C . PASS END=155004052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,875:0,31,255:23,0 chr1 155004053 . T . PASS END=155004053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:23,0 chr1 155004054 . G . PASS END=155004055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:24,0 chr1 155004056 . C . PASS END=155004060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,925:0,42,255:26,0 chr1 155004061 . C . PASS END=155004061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 155004062 . C . PASS END=155004062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155004063 . A . PASS END=155004063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 155004064 . C . PASS END=155004066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:46:30:0,46,1039:0,46,255:27,0 chr1 155004067 . A . PASS END=155004067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 155004068 . G . PASS END=155004070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 155004071 . C . PASS END=155004071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 155004072 . C . PASS END=155004072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155004073 . A . PASS END=155004073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:29,0 chr1 155004074 . G . PASS END=155004075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,886:0,66,255:29,0 chr1 155004076 . T . PASS END=155004076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 155004077 . T . PASS END=155004077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:29,2 chr1 155004078 . G . LowGQ END=155004079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:0:32:0,0,986:3,0,255:30,2 chr1 155004080 . A . PASS END=155004083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1216:0,83,255:32,0 chr1 155004084 . C . PASS END=155004084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:32,0 chr1 155004085 . A . PASS END=155004087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:32,0 chr1 155004088 . A . PASS END=155004088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1196:0,85,255:32,0 chr1 155004089 . G . PASS END=155004089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr1 155004090 . C . PASS END=155004228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1260:0,82,255:40,0 chr1 155004229 . A . PASS END=155004239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr1 155004240 . A . PASS END=155004241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,61,255:19,0 chr1 155004242 . C . PASS END=155004245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 155004246 . G . PASS END=155004247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 155005143 . C . PASS END=155005244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,111,1681:0,111,255:40,0 chr1 155005570 . T . PASS END=155005586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:19,0 chr1 155005587 . G . PASS END=155005618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,814:0,63,255:26,0 chr1 155005619 . G . PASS END=155005725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,92,255:36,0 chr1 155005726 . G . PASS END=155005740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:25,0 chr1 155005910 . T . PASS END=155005930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,953:0,65,255:26,0 chr1 155005931 . G . PASS END=155005998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:37,0 chr1 155005999 . A . PASS END=155005999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 155006000 . G . PASS END=155006053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1365:0,84,255:38,0 chr1 155006054 . G . PASS END=155006068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,102,1530:0,111,255:37,0 chr1 155006069 . C . PASS END=155006069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 155006070 . T . PASS END=155006090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1223:0,94,255:34,0 chr1 155006091 . A G, 49.94 PASS DP=37;MQ=250.00;MQRankSum=5.181;ReadPosRankSum=2.841;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,0:0.486,0.000:37:8,9,0:11,9,0:48:85,0,50,643,657,1300:255,0,255:16,0:4.9944e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,14,8,10:12,7,11,7 chr1 155006092 . C . PASS END=155006105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:31,0 chr1 155006106 . A . PASS END=155006117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:67:26:0,67,857:0,67,255:26,0 chr1 155006118 . C . PASS END=155006119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 155006120 . C . PASS END=155006128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:21,0 chr1 155006129 . G . PASS END=155006130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 155006131 . T . PASS END=155006131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 155006132 . C . PASS END=155006135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,640:0,63,255:21,0 chr1 155006136 . T . PASS END=155006137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155006138 . C . PASS END=155006142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155006143 . A . PASS END=155006144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,735:0,50,255:19,0 chr1 155006145 . G . PASS END=155006149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155006150 . G . PASS END=155006168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 155006169 . T . PASS END=155006170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 155006171 . T . PASS END=155006175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155006176 . A . PASS END=155006176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 155006177 . T . PASS END=155006177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155006513 . A . PASS END=155006573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:60:0,120,1800:0,146,255:40,0 chr1 155006814 . G . PASS END=155006826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,954:0,70,255:26,0 chr1 155006827 . C . PASS END=155006838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr1 155006839 . A . PASS END=155006839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 155006840 . A . PASS END=155006843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155006844 . C . PASS END=155006848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:25,0 chr1 155006849 . T . PASS END=155006849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,984:0,40,255:24,0 chr1 155006850 . C . PASS END=155006855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,998:0,68,255:25,0 chr1 155006856 . G . PASS END=155006856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 155006857 . A . PASS END=155006859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr1 155006860 . C . PASS END=155006860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 155006861 . C . PASS END=155006883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:25,0 chr1 155006884 . T . PASS END=155006884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:21,0 chr1 155006885 . G . PASS END=155006903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 155006904 . C . PASS END=155006904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 155006905 . T . PASS END=155006924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:25,0 chr1 155006925 . C . PASS END=155006925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 155006926 . T . PASS END=155006936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 155006937 . C . PASS END=155006937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 155006938 . T . PASS END=155006939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 155006940 . C . PASS END=155006940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 155006941 . C . PASS END=155006947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:23,0 chr1 155006948 . C . PASS END=155006948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:23,0 chr1 155006949 . T . PASS END=155006951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 155006952 . A . PASS END=155006952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr1 155006953 . G . PASS END=155006961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:26,0 chr1 155006962 . T . PASS END=155006970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr1 155006971 . A . PASS END=155006971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 155006972 . G . PASS END=155006972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 155006973 . C . PASS END=155006983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 155006984 . T . PASS END=155006985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,875:0,56,255:22,0 chr1 155006986 . C . PASS END=155006989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 155006990 . C . PASS END=155006990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 155006991 . A . PASS END=155006993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 155006994 . G . PASS END=155006994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 155006995 . C . PASS END=155006998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:23,0 chr1 155006999 . C T, 48.22 PASS DP=22;MQ=249.73;MQRankSum=3.873;ReadPosRankSum=2.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,9,0:0.409,0.000:22:6,3,0:7,6,0:47:83,0,50,293,465,758:235,0,255:13,0:4.8221e+01,8.7237e-05,5.3000e+01,2.9304e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,6,3:9,4,4,5 chr1 155007000 . C . PASS END=155007020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 155007021 . G . PASS END=155007028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,53,255:20,0 chr1 155007029 . G . PASS END=155007036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:24,0 chr1 155007129 . G . PASS END=155007143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:31,0 chr1 155007144 . T . PASS END=155007144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 155007145 . G . PASS END=155007161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1081:0,93,255:33,0 chr1 155007162 . T . PASS END=155007162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:32,0 chr1 155007163 . C . PASS END=155007176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:33,0 chr1 155007177 . A . PASS END=155007179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 155007180 . T . PASS END=155007192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1101:0,82,255:32,0 chr1 155007193 . C . PASS END=155007193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1078:0,57,255:31,0 chr1 155007194 . A . PASS END=155007203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1188:0,96,255:33,0 chr1 155011879 . G . PASS END=155011886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:19,0 chr1 155011887 . G . PASS END=155011887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 155011888 . C . PASS END=155011912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 155011913 . C . PASS END=155011917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 155011918 . G . PASS END=155011926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155011927 . G . PASS END=155011930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155011931 . C . PASS END=155011931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr1 155011932 . C . PASS END=155011951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,861:0,66,255:25,0 chr1 155011952 . G . PASS END=155011952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 155011953 . G . PASS END=155011953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 155011954 . G . PASS END=155011954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 155011955 . C . PASS END=155011971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 155011972 . T . PASS END=155011997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,527:0,42,255:18,0 chr1 155011998 . A . PASS END=155012007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 155012961 . G . PASS END=155012970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 155012971 . C . PASS END=155012971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 155012972 . A . PASS END=155013069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1120:0,87,255:40,0 chr1 155013070 . C . PASS END=155013100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,876:0,69,255:26,0 chr1 155013873 . A . PASS END=155013874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155013875 . T . PASS END=155013875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 155013876 . A . PASS END=155013880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 155013881 . A . PASS END=155013881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,399:0,6,255:14,0 chr1 155013882 . G . PASS END=155013882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 155013883 . A . PASS END=155013884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 155013885 . T . PASS END=155013885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 155013886 . T . PASS END=155013891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155013892 . G . PASS END=155013892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 155013893 . A . PASS END=155013902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 155013903 . C . PASS END=155013903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 155013904 . G . PASS END=155013910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 155013911 . C . PASS END=155013911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 155013912 . T . PASS END=155013913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 155013914 . C . PASS END=155013914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 155013915 . G . PASS END=155013918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr1 155013919 . C . PASS END=155013921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:16,0 chr1 155013922 . T . PASS END=155013922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 155013923 . T . PASS END=155013923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 155013924 . G . PASS END=155013929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 155013930 . C . PASS END=155013930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 155013931 . T . PASS END=155013931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155013932 . G . PASS END=155013932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 155013933 . G . PASS END=155013934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 155013935 . T . PASS END=155013935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 155013936 . G . PASS END=155013939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 155013940 . A . PASS END=155013940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 155013941 . G . PASS END=155013946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155013947 . T . PASS END=155013947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 155013948 . A . PASS END=155013986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,621:0,41,255:18,0 chr1 155013987 . G . PASS END=155013987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 155013988 . G . PASS END=155014005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,582:0,40,255:19,0 chr1 155014006 . G . PASS END=155014009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 155014010 . G . PASS END=155014026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,698:0,57,255:19,0 chr1 155014027 . C . PASS END=155014028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 155014029 . T . PASS END=155014073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,621:0,41,255:19,0 chr1 155014074 . A . PASS END=155014084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,42,255:13,0 chr1 155014085 . C . PASS END=155014085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 155014086 . T . PASS END=155014086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 155014087 . C . PASS END=155014087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 155014088 . C . PASS END=155014088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155014089 . T . PASS END=155014089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155014190 . A . PASS END=155014197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 155014198 . A . PASS END=155014198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 155014199 . A . PASS END=155014199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 155014200 . C . PASS END=155014200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 155014201 . C . PASS END=155014201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 155014202 . A . PASS END=155014203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155014204 . G . PASS END=155014208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155014209 . A . PASS END=155014209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:25,0 chr1 155014210 . C . PASS END=155014216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155014217 . G . PASS END=155014217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155014218 . C . PASS END=155014218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 155014219 . C . PASS END=155014220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155014221 . T . PASS END=155014221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 155014222 . C . PASS END=155014222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 155014223 . G . PASS END=155014224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155014225 . T . PASS END=155014226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155014227 . G . PASS END=155014233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155014234 . C . PASS END=155014234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155014235 . G . PASS END=155014237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 155014238 . A . PASS END=155014309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1064:0,90,255:35,0 chr1 155014310 . A . PASS END=155014310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 155014311 . G . PASS END=155014312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155014313 . T . PASS END=155014313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 155014314 . C . PASS END=155014321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1080:0,90,255:30,0 chr1 155014322 . G . PASS END=155014322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 155014323 . C . PASS END=155014324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 155014325 . T . PASS END=155014330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 155014331 . A . PASS END=155014333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,855:0,74,255:19,0 chr1 155015211 . T . PASS END=155015286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1145:0,80,255:38,0 chr1 155015287 . T . PASS END=155015287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:29,0 chr1 155015288 . A . PASS END=155015327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1135:0,82,255:33,0 chr1 155015328 . T . PASS END=155015328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 155015329 . C . PASS END=155015332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 155015828 . G . PASS END=155015833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 155015834 . A . PASS END=155015834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 155015835 . A . PASS END=155015848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,559:0,40,255:19,0 chr1 155015849 . C . PASS END=155015852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 155015853 . G . PASS END=155015853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 155015854 . G . PASS END=155015855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 155015856 . T . PASS END=155015856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155015857 . C . PASS END=155015866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,752:0,63,255:22,0 chr1 155015867 . T . PASS END=155015867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 155015868 . G . PASS END=155015876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 155015877 . T . PASS END=155015962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,629:0,41,255:19,0 chr1 155015963 . A . PASS END=155015963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 155015964 . C . PASS END=155015977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 155015978 . C . PASS END=155015985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 155018369 . G . PASS END=155018468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,115,1477:0,115,255:40,0 chr1 155018601 . G . PASS END=155018688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:41:0,93,1332:0,93,255:40,0 chr1 155018689 . G . PASS END=155018689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1221:0,59,255:33,0 chr1 155018690 . C . PASS END=155018696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1485:0,120,255:36,0 chr1 155018836 . G . PASS END=155018928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:38:0,87,1413:0,87,255:40,2 chr1 155018929 . C . PASS END=155018930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1482:0,60,255:36,2 chr1 155018931 . C . PASS END=155018947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1215:0,88,255:37,0 chr1 155018948 . A . PASS END=155018962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,63,255:26,0 chr1 155019665 . G . PASS END=155019672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 155019673 . C . PASS END=155019681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 155019682 . A . PASS END=155019682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,436:0,31,255:15,0 chr1 155019683 . C . PASS END=155019683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 155019684 . T . PASS END=155019684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 155019685 . G . PASS END=155019705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:18,0 chr1 155019706 . C . PASS END=155019709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 155019710 . A C, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=2.532;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:6,6,0:4,4,0:48:85,0,50,292,358,650:255,0,255:10,0:5.0000e+01,6.5233e-05,5.3000e+01,2.9213e+02,3.9244e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,9,1:7,3,7,3 chr1 155019711 . T . PASS END=155019747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,636:0,43,255:19,0 chr1 155019748 . G . PASS END=155019753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:18,0 chr1 155019754 . C . PASS END=155019754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 155019755 . T . PASS END=155019763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 155019764 . A . PASS END=155019764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:14,0 chr1 155019765 . C . PASS END=155019765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 155019766 . A . PASS END=155019766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 155019767 . G . PASS END=155019780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 155019781 . C . PASS END=155019788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,520:0,31,255:15,0 chr1 155020263 . C . PASS END=155020264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 155020265 . T . PASS END=155020269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155020270 . G . PASS END=155020351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1235:0,90,255:37,0 chr1 155020352 . C . PASS END=155020352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:28,0 chr1 155020353 . A . PASS END=155020359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 155020360 . T . PASS END=155020360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr1 155020361 . G . PASS END=155020378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 155020379 . G . PASS END=155020405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:24:0,67,914:0,67,255:26,0 chr1 155020533 . C . PASS END=155020536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1246:0,105,255:36,0 chr1 155020537 . A . PASS END=155020537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1113:0,75,255:33,0 chr1 155020538 . G . PASS END=155020538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 155020539 . A . PASS END=155020539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1102:0,75,255:33,0 chr1 155020540 . A . PASS END=155020641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1270:0,84,255:40,0 chr1 155020642 . C . PASS END=155020646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:23,0 chr1 155021470 . G . PASS END=155021470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 155021471 . T . PASS END=155021471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 155021472 . C . PASS END=155021475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 155021476 . A . PASS END=155021476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 155021477 . C . PASS END=155021479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 155021480 . A . PASS END=155021480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 155021481 . G . PASS END=155021485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 155021486 . A . PASS END=155021486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 155021487 . G . PASS END=155021491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1066:0,82,255:32,0 chr1 155021492 . T . PASS END=155021492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1108:0,52,255:30,0 chr1 155021493 . C . PASS END=155021577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1133:0,80,255:39,0 chr1 155021578 . C . PASS END=155021578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1069:0,38,255:25,0 chr1 155021579 . G . PASS END=155021580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155021581 . T . PASS END=155021595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 155023093 . C . PASS END=155023104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 155023105 . G . PASS END=155023110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 155023111 . A . PASS END=155023169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,512:0,41,255:19,0 chr1 155023170 . C . PASS END=155023170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 155023171 . C . PASS END=155023176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155023177 . C . PASS END=155023182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 155023183 . A . PASS END=155023193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155023194 . C . PASS END=155023199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 155023200 . G . PASS END=155023200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155023201 . T . PASS END=155023220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 155023221 . G . PASS END=155023245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,50,255:18,0 chr1 155023246 . G . PASS END=155023246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 155023247 . A . PASS END=155023270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:16,0 chr1 155023271 . T . PASS END=155023281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 155023282 . C . PASS END=155023283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 155023284 . C . PASS END=155023319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr1 155023320 . C . PASS END=155023320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 155023321 . G . PASS END=155023336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,352:0,33,255:12,0 chr1 155023337 . C . PASS END=155023344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 155023863 . A . PASS END=155023871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr1 155023872 . G . PASS END=155023877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:25,0 chr1 155023878 . C . PASS END=155023878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 155023879 . T . PASS END=155023925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 155023926 . C . PASS END=155023926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 155023927 . C . PASS END=155023936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,961:0,75,255:25,0 chr1 155023937 . T . PASS END=155023937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:22,0 chr1 155023938 . A . PASS END=155023940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:24,0 chr1 155023941 . G . PASS END=155023941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 155025007 . T . PASS END=155025014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,870:0,75,255:26,0 chr1 155025015 . T . PASS END=155025016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 155025017 . C . PASS END=155025035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 155025117 . T . PASS END=155025120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 155025121 . G . PASS END=155025129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 155025130 . T . PASS END=155025154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,645:0,43,255:19,0 chr1 155025155 . G . PASS END=155025163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155025164 . C . PASS END=155025164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 155025165 . A . PASS END=155025166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 155025167 . G . PASS END=155025169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155025170 . G . PASS END=155025170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155025171 . A . PASS END=155025171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 155025172 . G . PASS END=155025206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:23,0 chr1 155025207 . A . PASS END=155025207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 155025208 . G . PASS END=155025226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 155025227 . C . PASS END=155025253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:19,0 chr1 155025893 . A . PASS END=155025969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:40:0,97,1506:0,97,255:40,0 chr1 155026386 . G . PASS END=155026402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr1 155026403 . G . PASS END=155026411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:31,0 chr1 155026412 . T . PASS END=155026412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 155026413 . G . PASS END=155026430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1109:0,80,255:32,0 chr1 155026431 . T . PASS END=155026431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 155026432 . G . PASS END=155026439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 155026440 . G . PASS END=155026440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:27,0 chr1 155026441 . G . PASS END=155026446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 155026447 . A . PASS END=155026447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 155026448 . G . PASS END=155026449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155026450 . G . PASS END=155026464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1011:0,73,255:26,0 chr1 155026626 . G . PASS END=155026702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:44:0,96,1440:0,99,255:40,0 chr1 155026790 . A . PASS END=155026798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:31,0 chr1 155026799 . G . PASS END=155026799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:31,0 chr1 155026800 . G . PASS END=155026856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1188:0,85,255:37,0 chr1 155026857 . C . PASS END=155026857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 155026858 . C . PASS END=155026864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 155026865 . T . PASS END=155026865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 155026866 . A . PASS END=155026866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155026867 . T . PASS END=155026867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:26,0 chr1 155026868 . T . PASS END=155026878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 155026879 . A . PASS END=155026882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 155026883 . T . PASS END=155026883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,787:0,50,255:23,0 chr1 155026884 . C . PASS END=155026885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155026886 . C . PASS END=155026886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155026887 . C . PASS END=155026904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 155026905 . T . PASS END=155026941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 155026942 . A C, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:69:157,72,0,921,72,921:255,72,0:0,0:1.1923e+02,6.9230e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,13:0,0,12,12 chr1 155026943 . G . PASS END=155026943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155026944 . C . PASS END=155026952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 155026953 . C . PASS END=155026973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:13:0,33,495:0,39,255:13,0 chr1 155026974 . A . PASS END=155026974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 155026975 . T . PASS END=155026979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 155026980 . C . PASS END=155026982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 155028266 . A . PASS END=155028268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,117,1459:0,117,255:39,0 chr1 155028269 . C . PASS END=155028269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:38,0 chr1 155028270 . G . PASS END=155028328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1395:0,107,255:40,0 chr1 155028408 . G . PASS END=155028413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:24,0 chr1 155028414 . A . PASS END=155028414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 155028415 . A . PASS END=155028445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,886:0,61,255:26,0 chr1 155028446 . C . PASS END=155028447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 155028448 . C . PASS END=155028462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:23,0 chr1 155028463 . T . PASS END=155028463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,705:0,36,255:19,0 chr1 155028464 . C . PASS END=155028476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 155028556 . T . PASS END=155028559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 155028560 . T . PASS END=155028560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 155028561 . C . PASS END=155028561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:23,0 chr1 155028562 . C . PASS END=155028584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:27,0 chr1 155028585 . A . PASS END=155028590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 155028591 . G . PASS END=155028591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 155028592 . G . PASS END=155028725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:32:0,80,1177:0,80,255:40,0 chr1 155028862 . T . PASS END=155028946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:35:0,88,1235:0,88,255:40,0 chr1 155029429 . G . PASS END=155029436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,791:0,66,255:23,0 chr1 155029437 . C . PASS END=155029437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 155029438 . A . PASS END=155029448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:24,0 chr1 155029449 . G . PASS END=155029449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 155029450 . G . PASS END=155029484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,882:0,62,255:26,0 chr1 155029485 . C . PASS END=155029485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 155029486 . A . PASS END=155029506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 155029507 . T . PASS END=155029507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155029508 . T . PASS END=155029515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155029516 . A . PASS END=155029518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 155029519 . A . PASS END=155029526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155029527 . C . PASS END=155029529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 155029530 . T . PASS END=155029531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:18,0 chr1 155029532 . C . PASS END=155029532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,659:0,8,255:17,0 chr1 155029533 . A . PASS END=155029536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:16,0 chr1 155029537 . C . PASS END=155029537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:15,0 chr1 155029538 . C . PASS END=155029543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:16,0 chr1 155029544 . C . PASS END=155029544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 155029545 . A . PASS END=155029568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 155029569 . C . PASS END=155029570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 155029571 . C . PASS END=155029575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 155029576 . G . PASS END=155029577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 155029664 . C . PASS END=155029667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 155029668 . C . PASS END=155029668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 155029669 . T . PASS END=155029693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,529:0,45,255:17,0 chr1 155029694 . C . PASS END=155029694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 155029695 . A . PASS END=155029703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,657:0,41,255:18,0 chr1 155029704 . G . PASS END=155029705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155029706 . C . PASS END=155029706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 155029707 . C . PASS END=155029712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 155029713 . A . PASS END=155029714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 155029715 . A . PASS END=155029725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,894:0,69,255:26,0 chr1 155029726 . A . PASS END=155029726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 155029727 . T . PASS END=155029727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:25,0 chr1 155029728 . G . PASS END=155029729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155029730 . A . PASS END=155029730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr1 155029731 . A . PASS END=155029731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155029732 . T . PASS END=155029732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155029733 . G . PASS END=155029738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 155029739 . C . PASS END=155029740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155029741 . G . PASS END=155029760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 155029761 . A . PASS END=155029772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 155029773 . A . PASS END=155029794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,864:0,64,255:26,0 chr1 155029795 . T . PASS END=155029796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,897:0,42,255:25,0 chr1 155029797 . T . PASS END=155029807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,690:0,61,255:24,0 chr1 155029808 . G . PASS END=155029808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 155029809 . G . PASS END=155029809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 155029810 . G . PASS END=155029810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr1 155029811 . C . PASS END=155029811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 155029812 . G . PASS END=155029812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 155029813 . A . PASS END=155029814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 155029815 . C . PASS END=155029817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 155029818 . T . PASS END=155029818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:18,0 chr1 155029819 . G . PASS END=155029838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:19,0 chr1 155030113 . G . PASS END=155030151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:23,0 chr1 155030152 . C . PASS END=155030152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 155030153 . T . PASS END=155030179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,923:0,69,255:25,0 chr1 155030180 . A . PASS END=155030180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 155030181 . C . PASS END=155030183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 155030184 . A . PASS END=155030184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 155030185 . C . PASS END=155030194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 155030195 . A . PASS END=155030195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 155030196 . A . PASS END=155030205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,902:0,75,255:25,0 chr1 155030327 . C . PASS END=155030352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:19,0 chr1 155030353 . T . PASS END=155030359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 155030360 . A . PASS END=155030360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 155030361 . G . PASS END=155030372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,735:0,60,255:20,0 chr1 155030373 . A . PASS END=155030373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155030374 . C . PASS END=155030383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 155030384 . T . PASS END=155030394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 155030395 . A . PASS END=155030413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:22,0 chr1 155030414 . C . PASS END=155030414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 155030415 . C . PASS END=155030421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 155030422 . C . PASS END=155030429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 155030430 . G . PASS END=155030431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155030432 . G . PASS END=155030439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr1 155030440 . G . PASS END=155030460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 155030461 . T . PASS END=155030466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 155030467 . C . PASS END=155030467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155030468 . A . PASS END=155030469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155030470 . G . PASS END=155030474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155030475 . G . PASS END=155030485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,712:0,44,255:19,0 chr1 155030486 . T . PASS END=155030486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 155030487 . C . PASS END=155030487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155030488 . C . PASS END=155030489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155030490 . A . PASS END=155030492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:56:22:0,56,855:0,56,255:20,0 chr1 155030493 . C . PASS END=155030501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 155030502 . G . PASS END=155030502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 155030503 . C . PASS END=155030519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:26,0 chr1 155030520 . C . PASS END=155030540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr1 155030541 . C . PASS END=155030541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 155030542 . A . PASS END=155030544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 155030545 . T . PASS END=155030545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 155030546 . T . PASS END=155030556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 155030557 . A C, 134.28 PASS DP=29;MQ=249.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,10,0:0,19,0:84:172,87,0,1116,87,1116:255,87,0:0,0:1.3428e+02,8.4279e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,15:0,0,13,16 chr1 155030558 . G . PASS END=155030560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155030561 . A . PASS END=155030572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 155030573 . A . PASS END=155030574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 155030575 . T . PASS END=155030576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 155030577 . C . PASS END=155030577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:21,0 chr1 155030578 . T . PASS END=155030594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:25,0 chr1 155030595 . G . PASS END=155030608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr1 155030609 . A . PASS END=155030616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,62,255:19,0 chr1 155030617 . G . PASS END=155030618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 155030619 . C . PASS END=155030619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 155030620 . C . PASS END=155030622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155030623 . C . PASS END=155030631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,676:0,46,255:19,0 chr1 155030722 . A . PASS END=155030728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 155030729 . A . PASS END=155030729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 155030730 . T . PASS END=155030744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,723:0,63,255:22,0 chr1 155030745 . A . PASS END=155030745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 155030746 . G . PASS END=155030769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:23,0 chr1 155030770 . T . PASS END=155030770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 155030771 . C . PASS END=155030801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,878:0,69,255:25,0 chr1 155030802 . A . PASS END=155030802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 155030803 . G . PASS END=155030830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 155030831 . A . PASS END=155030831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 155030832 . A . PASS END=155030849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 155030850 . T . PASS END=155030850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:21,0 chr1 155030851 . G . PASS END=155030884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 155030885 . A . PASS END=155030894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 155030895 . G . PASS END=155030896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155030897 . A . PASS END=155030921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr1 155030922 . G . PASS END=155030930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 155030931 . G . PASS END=155030932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 155030933 . G . PASS END=155030936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 155030937 . A . PASS END=155030937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr1 155030938 . A . PASS END=155030942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 155030943 . A . PASS END=155030943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 155030944 . G . PASS END=155030946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155030947 . G . PASS END=155030950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155031186 . G . PASS END=155031222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:25,0 chr1 155031223 . T . PASS END=155031223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,711:0,22,255:22,0 chr1 155031224 . G . PASS END=155031263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,878:0,61,255:25,0 chr1 155032378 . G . PASS END=155032423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1434:0,101,255:40,0 chr1 155032424 . C . PASS END=155032424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr1 155032425 . C . PASS END=155032441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1302:0,89,255:35,0 chr1 155032442 . A . PASS END=155032442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:34,0 chr1 155032443 . G . PASS END=155032444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 155032445 . T . PASS END=155032445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:33,0 chr1 155032446 . C . PASS END=155032450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:34,0 chr1 155032681 . C . PASS END=155032682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 155032683 . A . PASS END=155032683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr1 155032684 . C . PASS END=155032691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1011:0,84,255:30,0 chr1 155032692 . C . PASS END=155032692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 155032693 . T . PASS END=155032819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:31:0,87,1350:0,87,255:40,0 chr1 155033239 . G . PASS END=155033240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 155033241 . C . PASS END=155033241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 155033242 . A . PASS END=155033279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,692:0,54,255:19,0 chr1 155033280 . A . PASS END=155033291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,643:0,51,255:17,0 chr1 155033292 . T . PASS END=155033308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:12,0 chr1 155033891 . C . PASS END=155033892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155033893 . G . PASS END=155033898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 155033899 . T . PASS END=155033900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 155033901 . C . PASS END=155033917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 155033918 . C T, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=2.783;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,8,0:0.500,0.000:16:5,1,0:3,7,0:48:85,0,50,278,279,557:254,0,254:7,0:5.0000e+01,6.5233e-05,5.3000e+01,2.7809e+02,3.1409e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,5,3:4,4,4,4 chr1 155033919 . C . PASS END=155033926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 155033927 . A . PASS END=155033927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 155033928 . G . PASS END=155033946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr1 155033947 . T . PASS END=155033955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155033956 . G . PASS END=155033962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,385:0,39,255:13,0 chr1 155033963 . C . PASS END=155033963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 155033964 . A . PASS END=155033965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155034380 . G . PASS END=155034381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155034382 . T . PASS END=155034382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 155034383 . G . PASS END=155034395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 155034396 . G . PASS END=155034399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155034400 . C . PASS END=155034435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,734:0,63,255:24,0 chr1 155034436 . G . PASS END=155034436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 155034437 . G . PASS END=155034439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155034440 . A . PASS END=155034440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 155034441 . G . PASS END=155034449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 155034450 . A . PASS END=155034455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 155034456 . C . PASS END=155034460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155034461 . G . PASS END=155034478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,53,255:19,0 chr1 155034479 . G . PASS END=155034479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 155034480 . C . PASS END=155034481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:14,0 chr1 155034482 . T . PASS END=155034490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:15:0,33,495:0,45,255:13,0 chr1 155034721 . T . PASS END=155034744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr1 155034745 . C . PASS END=155034749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 155034750 . A . PASS END=155034750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 155034751 . A . PASS END=155034774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,243:0,21,243:9,0 chr1 155034775 . C . PASS END=155034775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 155034776 . A . PASS END=155034776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 155034777 . G . PASS END=155034796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,368:0,33,255:12,0 chr1 155034797 . A . PASS END=155034797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 155034798 . C . PASS END=155034809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 155034810 . A . PASS END=155034810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr1 155034811 . G . PASS END=155034814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 155034815 . C . PASS END=155034818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155034819 . A . PASS END=155034819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr1 155034820 . A . PASS END=155034820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155034821 . T . PASS END=155034821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 155034822 . C . PASS END=155034826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 155034827 . C . PASS END=155034829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155034830 . T . PASS END=155034831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155034832 . G . PASS END=155034832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 155034833 . T . PASS END=155034835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155034836 . T . PASS END=155034836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 155034837 . A . PASS END=155034837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155034838 . C . PASS END=155034838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 155034839 . C . PASS END=155034839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 155034840 . C . PASS END=155034840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155034841 . T . PASS END=155034845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:18,0 chr1 155034936 . A . PASS END=155034960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 155034961 . T . PASS END=155034978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr1 155036300 . A . PASS END=155036316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr1 155036317 . G . PASS END=155036348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,701:0,60,255:26,0 chr1 155036349 . G . PASS END=155036350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 155036351 . T . PASS END=155036355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr1 155036356 . T . PASS END=155036356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:25,0 chr1 155036357 . C . PASS END=155036396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,914:0,62,255:25,0 chr1 155036397 . A . PASS END=155036397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 155036398 . C . PASS END=155036398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155036399 . T . PASS END=155036412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:20:0,45,675:0,53,255:19,0 chr1 155039206 . G . PASS END=155039210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 155039211 . T . PASS END=155039211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 155039212 . T . PASS END=155039219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155039220 . A . PASS END=155039220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,389:0,25,255:12,0 chr1 155039221 . C . PASS END=155039223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155039224 . C . PASS END=155039324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,512:0,40,255:19,0 chr1 155039325 . T . PASS END=155039325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:14,0 chr1 155039326 . G . PASS END=155039333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 155039334 . C . PASS END=155039335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr1 155039336 . G . PASS END=155039347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 155039348 . T . PASS END=155039352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 155039353 . G . PASS END=155039368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:23,0 chr1 155039369 . G . PASS END=155039369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 155039370 . C . PASS END=155039382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr1 155039383 . G . PASS END=155039398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 155039399 . T . PASS END=155039399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 155039400 . T . PASS END=155039451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1140:0,83,255:33,0 chr1 155039452 . C . PASS END=155039452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr1 155039453 . G . PASS END=155039472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1041:0,84,255:29,0 chr1 155039473 . A . PASS END=155039473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 155039474 . G . PASS END=155039480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:25,0 chr1 155039481 . A . PASS END=155039484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 155039485 . C . PASS END=155039491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 155039492 . T . PASS END=155039492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 155039848 . C . PASS END=155039916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,104,1435:0,104,255:40,0 chr1 155041329 . A . PASS END=155041329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 155041330 . G . PASS END=155041330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155041331 . T . PASS END=155041341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 155041342 . C . PASS END=155041343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 155041344 . A . PASS END=155041344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 155041345 . T . PASS END=155041350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:29,0 chr1 155041351 . T . PASS END=155041351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 155041352 . G . PASS END=155041352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155041353 . G . PASS END=155041353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 155041354 . G . PASS END=155041417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1103:0,83,255:32,0 chr1 155041418 . T . PASS END=155041447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,64,255:26,0 chr1 155041448 . C . PASS END=155041450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 155041451 . C . PASS END=155041465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,876:0,69,255:25,0 chr1 155041475 . A . PASS END=155041478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:29,0 chr1 155041479 . T . PASS END=155041480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 155041481 . C . PASS END=155041487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1040:0,87,255:29,0 chr1 155041488 . T . PASS END=155041488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 155041489 . C . PASS END=155041500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 155041501 . G . PASS END=155041505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155041506 . C . PASS END=155041520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 155041521 . G . PASS END=155041521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 155041522 . G . PASS END=155041608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1057:0,80,255:32,0 chr1 155041609 . A . PASS END=155041609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 155041610 . G . PASS END=155041613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1047:0,81,255:27,0 chr1 155041614 . A . PASS END=155041641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 155041642 . C . PASS END=155041649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr1 155051418 . A . PASS END=155051426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 155051427 . G . PASS END=155051439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,264:0,24,255:9,0 chr1 155051440 . T . PASS END=155051442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 155051443 . T . PASS END=155051469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 155051470 . T . PASS END=155051477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155051478 . C . PASS END=155051478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 155051479 . T . PASS END=155051479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155051480 . G . PASS END=155051520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 155051521 . T . PASS END=155051540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr1 155051541 . C . PASS END=155051541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 155051542 . A . PASS END=155051545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 155057567 . C . PASS END=155057578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 155057579 . G . PASS END=155057598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 155057599 . A . PASS END=155057609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:18,0 chr1 155057610 . T . PASS END=155057610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 155057611 . A . PASS END=155057627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 155057628 . C . PASS END=155057630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155057631 . C . PASS END=155057637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr1 155057638 . A . PASS END=155057644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:13,0 chr1 155057645 . GGGGGTGGGCCCC G, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=2.117;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,9,0:0.562,0.000:16:6,8,0:1,1,0:48:79,0,49,378,294,672:255,0,187:6,14:5.0000e+01,6.8081e-05,5.2454e+01,3.8368e+02,3.2870e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:3,4,5,4:2,5,6,3 chr1 155057646 . G . LowGQ END=155057658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,14:21:0:17:0,0,0:255,0,164:16,14 chr1 155057659 . G . PASS END=155057659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 155057660 . G . PASS END=155057660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 155057661 . G . PASS END=155057665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr1 155057666 . A . PASS END=155057666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,510:0,4,255:14,0 chr1 155057667 . C . PASS END=155057668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155057669 . G . PASS END=155057669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:16,0 chr1 155057670 . G . PASS END=155057682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,607:0,40,255:19,0 chr1 155057683 . G . PASS END=155057684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 155057685 . G . PASS END=155057690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 155057691 . C . PASS END=155057691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155057692 . A . PASS END=155057692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 155057693 . G . PASS END=155057693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155057694 . T . PASS END=155057694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 155057695 . A . PASS END=155057703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 155057704 . A . PASS END=155057704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 155057705 . C . PASS END=155057705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155057706 . A . PASS END=155057707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155057708 . G . PASS END=155057708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:18,0 chr1 155057709 . G . PASS END=155057737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 155057738 . C . PASS END=155057740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 155057741 . C . PASS END=155057749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 155057750 . C . PASS END=155057750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 155057751 . T . PASS END=155057765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 155057766 . T . PASS END=155057766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 155057767 . G . PASS END=155057779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 155057780 . C . PASS END=155057780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 155057781 . G . PASS END=155057856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,507:0,45,255:16,0 chr1 155057857 . C . PASS END=155057866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 155057867 . G . PASS END=155057879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:9:0,23,360:0,23,255:9,0 chr1 155057880 . T . PASS END=155057880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 155058353 . C . PASS END=155058418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,101,1412:0,101,255:40,0 chr1 155058604 . C . PASS END=155058610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,599:0,40,255:19,0 chr1 155058611 . C . PASS END=155058615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr1 155058616 . G . PASS END=155058616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 155058617 . G . PASS END=155058619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 155058620 . G . PASS END=155058620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 155058621 . A . PASS END=155058625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 155058626 . G . PASS END=155058626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,593:0,43,255:19,0 chr1 155058627 . G . PASS END=155058635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,626:0,60,255:22,0 chr1 155058636 . C . PASS END=155058637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr1 155058638 . C . PASS END=155058639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr1 155058640 . C . PASS END=155058640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:23,0 chr1 155058641 . C . PASS END=155058646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,922:0,72,255:24,0 chr1 155058647 . C . PASS END=155058647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 155058648 . A . PASS END=155058651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 155058652 . T . PASS END=155058652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 155058653 . G . PASS END=155058653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:19,0 chr1 155058654 . G . PASS END=155058654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155058655 . G . PASS END=155058655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:20,0 chr1 155058656 . C . PASS END=155058660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 155058661 . A . PASS END=155058661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 155058662 . T . PASS END=155058664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 155058665 . G . PASS END=155058665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 155058666 . A . PASS END=155058668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 155058669 . A . PASS END=155058669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 155058670 . T . PASS END=155058670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 155058671 . C . PASS END=155058671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 155058672 . A . PASS END=155058673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,724:0,66,255:22,0 chr1 155058674 . C . PASS END=155058674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:20,0 chr1 155058675 . G . PASS END=155058681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:23,0 chr1 155058889 . A . PASS END=155058893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr1 155058894 . T . PASS END=155058894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 155058895 . T . PASS END=155058895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 155058896 . T . PASS END=155058896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 155058897 . G . PASS END=155058905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 155058906 . A . PASS END=155058906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,493:0,37,255:17,0 chr1 155058907 . A . PASS END=155058914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 155058915 . G . PASS END=155058919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 155058920 . C . PASS END=155058921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155058922 . A . PASS END=155058922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155058923 . G . PASS END=155058923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 155058924 . C . PASS END=155058934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155058935 . C . PASS END=155058936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 155058937 . T . PASS END=155058955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155058956 . A . PASS END=155058956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 155058957 . C . PASS END=155058967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 155058968 . G . PASS END=155058968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 155058969 . C . PASS END=155058975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 155058976 . C . PASS END=155058976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 155058977 . C . PASS END=155058983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,764:0,66,255:22,0 chr1 155058984 . A . PASS END=155058984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 155058985 . T . PASS END=155058985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 155058986 . C . PASS END=155058986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 155058987 . G . PASS END=155058995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,726:0,66,255:22,0 chr1 155058996 . C . PASS END=155058996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 155058997 . T . PASS END=155058998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155058999 . A . PASS END=155059000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 155059001 . G . PASS END=155059001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155059002 . A . PASS END=155059002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 155059003 . C . PASS END=155059016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155059017 . T . PASS END=155059019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:17,0 chr1 155100454 . A . PASS END=155100454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 155100455 . T . PASS END=155100455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 155100456 . G . PASS END=155100473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr1 155100474 . T . PASS END=155100474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,955:0,73,255:27,0 chr1 155100475 . C . PASS END=155100529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1085:0,80,255:34,0 chr1 155100530 . A . PASS END=155100545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,870:0,64,255:26,0 chr1 155103815 . G . PASS END=155103827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,864:0,61,255:25,0 chr1 155103828 . G . PASS END=155103877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1039:0,81,255:38,0 chr1 155103878 . G . PASS END=155103878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 155103879 . C . PASS END=155103881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:35,0 chr1 155103882 . T . PASS END=155103882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:34,0 chr1 155103883 . A . PASS END=155103918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1333:0,95,255:37,0 chr1 155103919 . A . PASS END=155103919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr1 155103920 . G . PASS END=155103936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:29,0 chr1 155103937 . T . PASS END=155103939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155103940 . A . PASS END=155103942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 155103943 . A . PASS END=155103943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 155103944 . T . PASS END=155103946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155103947 . G . PASS END=155103963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 155103964 . A . PASS END=155103964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 155103965 . G . PASS END=155103971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 155103972 . T . PASS END=155103972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 155103973 . C . PASS END=155103980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 155103981 . C . PASS END=155103991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:20:0,53,782:0,53,255:19,0 chr1 155103992 . G . PASS END=155104068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,762:0,62,255:25,0 chr1 155104069 . T . PASS END=155104069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 155104070 . G . PASS END=155104079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:22,0 chr1 155104080 . T . PASS END=155104080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:20,0 chr1 155104081 . T . PASS END=155104081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155104082 . C . PASS END=155104082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 155104083 . A . PASS END=155104096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 155104097 . C . PASS END=155104109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:18,0 chr1 155104110 . T . PASS END=155104110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 155105979 . C . PASS END=155106016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:39:0,90,1402:0,90,255:40,0 chr1 155106017 . T . PASS END=155106044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:44:0,93,1469:0,93,255:40,0 chr1 155106206 . C . PASS END=155106226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,149,255:40,0 chr1 155106227 . A T, 44.05 PASS DP=57;MQ=250.00;MQRankSum=6.245;ReadPosRankSum=4.442;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,21,0:0.368,0.000:57:19,12,0:17,9,0:44:79,0,50,751,1241,1992:255,0,255:32,0:4.4046e+01,1.9285e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,22,16,5:19,17,11,10 chr1 155106228 . C . PASS END=155106256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,126,255:40,0 chr1 155106431 . A . PASS END=155106512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,120,1800:0,123,255:40,0 chr1 155106513 . C . PASS END=155106543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,103,1619:0,103,255:40,0 chr1 155108063 . A . PASS END=155108072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:26,0 chr1 155108073 . G . PASS END=155108074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155108148 . A . PASS END=155108156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1291:0,108,255:37,0 chr1 155108388 . A . PASS END=155108434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1164:0,88,255:35,0 chr1 155108435 . G . PASS END=155108442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:36:0,75,1125:0,95,255:26,0 chr1 155108443 . C . PASS END=155108445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1260:0,105,255:28,0 chr1 155108446 . T . PASS END=155108447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155108448 . G . PASS END=155108450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 155108451 . A . PASS END=155108467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 155108775 . C . PASS END=155108828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:34:0,92,1183:0,92,255:37,0 chr1 155108829 . G . PASS END=155108829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr1 155108830 . C . PASS END=155108864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,83,255:37,0 chr1 155108865 . C . PASS END=155108866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 155108867 . G . PASS END=155108872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 155109304 . C . PASS END=155109308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1402:0,98,255:39,0 chr1 155109309 . T . PASS END=155109309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:37,0 chr1 155109310 . G . PASS END=155109389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:37:0,85,1361:0,85,255:40,0 chr1 155109390 . T . PASS END=155109390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:32,0 chr1 155109391 . G . PASS END=155109410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:33,0 chr1 155109411 . A . PASS END=155109411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 155109412 . T . PASS END=155109420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 155109421 . T . PASS END=155109427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:26,0 chr1 155110037 . C . PASS END=155110166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1196:0,93,255:40,0 chr1 155110167 . T . PASS END=155110186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:22:0,60,900:0,66,255:25,0 chr1 155110187 . C . PASS END=155110196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:19,0 chr1 155110197 . T . PASS END=155110198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 155110455 . G . PASS END=155110574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,155,255:40,0 chr1 155110638 . C . PASS END=155110649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,149,255:40,0 chr1 155110656 . G . PASS END=155110757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:33:0,90,1296:0,92,255:40,0 chr1 155112438 . T . PASS END=155112438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 155112439 . C . PASS END=155112439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 155112440 . A . PASS END=155112440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 155112441 . G . PASS END=155112446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,558:0,48,255:16,0 chr1 155112447 . C . PASS END=155112447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155112448 . A . PASS END=155112451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 155112452 . C . PASS END=155112452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 155112453 . C . PASS END=155112455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 155112456 . G . PASS END=155112456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 155112457 . C . PASS END=155112457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 155112458 . G . PASS END=155112458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 155112459 . G . PASS END=155112481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:19,0 chr1 155112482 . G . PASS END=155112482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 155112483 . T . PASS END=155112483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 155112484 . A . PASS END=155112490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 155112491 . T . PASS END=155112491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 155112492 . C . PASS END=155112520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,860:0,69,255:26,0 chr1 155112521 . C . PASS END=155112532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 155112533 . C . PASS END=155112537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155112538 . C . PASS END=155112539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155112540 . A . PASS END=155112542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 155112543 . G . PASS END=155112548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 155112549 . A . PASS END=155112549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1047:0,38,255:25,0 chr1 155112550 . G . PASS END=155112551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1039:0,71,255:26,0 chr1 155112552 . G . PASS END=155112564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 155112565 . C . PASS END=155112568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 155112569 . C . PASS END=155112569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155112570 . G . PASS END=155112571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155112572 . C . PASS END=155112600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 155112601 . C . PASS END=155112601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 155112602 . A . PASS END=155112608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 155112609 . T . PASS END=155112628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 155112629 . G . PASS END=155112643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1092:0,87,255:29,0 chr1 155112644 . C . PASS END=155112644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 155112645 . T . PASS END=155112649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1056:0,87,255:30,0 chr1 155112650 . T . PASS END=155112650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 155112651 . G . PASS END=155112659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1202:0,93,255:32,0 chr1 155112660 . C . PASS END=155112692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 155112693 . A . PASS END=155112693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 155112694 . A . PASS END=155112700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 155112701 . G . PASS END=155112701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 155112702 . C . PASS END=155112708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155112709 . T . PASS END=155112728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 155112729 . A . PASS END=155112734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 155112735 . A . PASS END=155112800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,630:0,40,255:19,0 chr1 155112801 . G . PASS END=155112806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 155141885 . A . PASS END=155142095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:35:0,81,1217:0,81,255:40,0 chr1 155142263 . A . PASS END=155142266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 155142267 . C . PASS END=155142333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,100,1660:0,100,255:40,0 chr1 155145041 . T . PASS END=155145201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:85:39:0,85,1452:0,85,255:40,0 chr1 155145202 . C . PASS END=155145202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:35,0 chr1 155145203 . A . PASS END=155145235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1380:0,87,255:39,0 chr1 155145236 . C . PASS END=155145236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:34,0 chr1 155145237 . C . PASS END=155145265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,1149:0,82,255:36,0 chr1 155145266 . A . PASS END=155145266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 155145267 . G . PASS END=155145273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 155145274 . G . PASS END=155145275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 155145276 . T . PASS END=155145282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:30,0 chr1 155145283 . C . PASS END=155145283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 155145284 . A . PASS END=155145284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 155145285 . G . PASS END=155145285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 155145286 . C . PASS END=155145290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 155145291 . G . PASS END=155145321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:24,0 chr1 155145322 . C . PASS END=155145324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 155145325 . G . PASS END=155145327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 155145328 . C . PASS END=155145353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr1 155145354 . T . PASS END=155145355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 155145356 . C . PASS END=155145368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:17,0 chr1 155145697 . C . PASS END=155145699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155145700 . T . PASS END=155145710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155145711 . C . PASS END=155145736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1047:0,81,255:33,0 chr1 155145737 . C . PASS END=155145737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr1 155145738 . A . PASS END=155145778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:32:0,89,1194:0,89,255:40,0 chr1 155145793 . C . PASS END=155145950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:39:0,87,1305:0,104,255:40,0 chr1 155145951 . C . PASS END=155145959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:33:0,60,900:0,99,255:25,0 chr1 155146443 . A . PASS END=155146450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155146451 . G . PASS END=155146458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,784:0,66,255:22,0 chr1 155146459 . A . PASS END=155146460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155146461 . A . PASS END=155146467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 155146468 . C . PASS END=155146468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr1 155146469 . C . PASS END=155146473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 155146474 . C . PASS END=155146494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,637:0,54,255:19,0 chr1 155146495 . T . PASS END=155146495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 155146496 . C . PASS END=155146502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 155146503 . A . PASS END=155146503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 155146504 . G . PASS END=155146505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 155147094 . A . PASS END=155147102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:34,0 chr1 155147103 . A . PASS END=155147103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1255:0,75,255:33,0 chr1 155147104 . A . PASS END=155147117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1075:0,85,255:34,0 chr1 155147290 . A . PASS END=155147296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 155147297 . C . PASS END=155147297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:11,0 chr1 155147298 . G . PASS END=155147298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 155147299 . A . PASS END=155147300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 155147301 . G . PASS END=155147303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 155147304 . G . PASS END=155147304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:12,0 chr1 155147305 . A . PASS END=155147307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155147308 . G . PASS END=155147308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 155147309 . G . PASS END=155147309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155147310 . G . PASS END=155147311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 155147312 . T . PASS END=155147313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155147496 . A . PASS END=155147522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,550:0,45,255:15,0 chr1 155147523 . A . PASS END=155147523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 155147524 . G . PASS END=155147525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 155147526 . G . PASS END=155147526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155147527 . G . PASS END=155147541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:17,0 chr1 155147542 . A . PASS END=155147543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:31:16:0,31,504:0,31,255:14,0 chr1 155147544 . G . PASS END=155147558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 155147662 . C . PASS END=155147686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1227:0,89,255:33,0 chr1 155147687 . G . PASS END=155147687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr1 155147688 . G . PASS END=155147748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1302:0,81,255:38,0 chr1 155147862 . A . PASS END=155147870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 155147871 . A . PASS END=155147872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155147873 . G . PASS END=155147877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155147878 . T . PASS END=155147878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 155147879 . G . PASS END=155147879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155147880 . G . PASS END=155147880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 155147881 . A . PASS END=155147887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 155147888 . A . PASS END=155147888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155147889 . C . PASS END=155147898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155147899 . C . PASS END=155147943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 155147944 . C . PASS END=155147950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 155147951 . C . PASS END=155147951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155147952 . G . PASS END=155147963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 155147964 . T . PASS END=155148017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,540:0,40,255:19,0 chr1 155148018 . A . PASS END=155148018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 155148019 . G . PASS END=155148019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 155148020 . C . PASS END=155148023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,574:0,12,255:15,0 chr1 155148024 . G . PASS END=155148024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 155148025 . A . PASS END=155148027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr1 155148028 . C . PASS END=155148034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 155148035 . T . PASS END=155148067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 155148068 . C . PASS END=155148068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 155148069 . C . PASS END=155148069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155148070 . T . PASS END=155148070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 155148071 . C . PASS END=155148078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 155148079 . G . PASS END=155148080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 155148081 . A . PASS END=155148082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 155148083 . T . PASS END=155148086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 155148087 . C . PASS END=155148087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 155148088 . C . PASS END=155148093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,360:0,22,255:9,0 chr1 155148094 . C . PASS END=155148106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 155148107 . C . PASS END=155148107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 155148108 . C . PASS END=155148109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155148110 . G . PASS END=155148113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155148114 . C . PASS END=155148120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155148121 . C . PASS END=155148121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 155148122 . A . PASS END=155148123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 155148364 . G . PASS END=155148375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,746:0,66,255:26,0 chr1 155148376 . A . PASS END=155148532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:27:0,80,1031:0,80,255:40,0 chr1 155148533 . T . PASS END=155148533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:32,0 chr1 155148534 . G . PASS END=155148679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,83,255:38,0 chr1 155148680 . C . PASS END=155148680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 155148681 . C . PASS END=155148682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 155148683 . G . PASS END=155148683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 155148684 . C . PASS END=155148686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155148687 . A . PASS END=155148707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,938:0,64,255:25,0 chr1 155149408 . G . PASS END=155149521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1260:0,98,255:40,0 chr1 155149522 . C . PASS END=155149548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,884:0,69,255:24,0 chr1 155149549 . A . PASS END=155149551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155149671 . G . PASS END=155149680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155149681 . C . PASS END=155149709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1062:0,86,255:34,0 chr1 155149710 . C . PASS END=155149710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr1 155149711 . A . PASS END=155149717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:33,0 chr1 155149718 . G A, 48.63 PASS DP=37;MQ=250.00;MQRankSum=5.135;ReadPosRankSum=2.161;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,16,0:0.432,0.000:37:8,10,0:13,6,0:47:83,0,50,572,722,1295:255,0,255:18,0:4.8633e+01,8.1283e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,9,7:10,11,13,3 chr1 155149719 . G . PASS END=155149737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:31,0 chr1 155149738 . A . PASS END=155149748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1053:0,71,255:25,0 chr1 155149749 . G . PASS END=155149749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:23,0 chr1 155149750 . C . PASS END=155149752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155149753 . T . PASS END=155149754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 155149755 . A . PASS END=155149755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155149756 . G . PASS END=155149757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155149758 . C . PASS END=155149766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 155150478 . G . PASS END=155150480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 155150481 . A . PASS END=155150481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 155150482 . G . PASS END=155150484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 155150485 . G . PASS END=155150485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 155150486 . T . PASS END=155150490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155150491 . A . PASS END=155150491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr1 155150492 . G . PASS END=155150500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 155150501 . G . PASS END=155150501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 155150502 . G . PASS END=155150526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1205:0,88,255:33,0 chr1 155150527 . T . PASS END=155150527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1190:0,66,255:32,2 chr1 155150528 . G . PASS END=155150528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1249:0,39,255:32,2 chr1 155150529 . G . PASS END=155150529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr1 155150530 . G . PASS END=155150690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1177:0,80,255:38,0 chr1 155150691 . C . PASS END=155150694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 155150695 . C . PASS END=155150699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155150700 . T . PASS END=155150700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,928:0,57,255:24,0 chr1 155150701 . T . PASS END=155150725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:25,0 chr1 155150726 . C . PASS END=155150731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 155150968 . G . PASS END=155150989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,925:0,62,255:26,0 chr1 155150990 . C . PASS END=155151066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1086:0,80,255:32,0 chr1 155151067 . G . PASS END=155151079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,972:0,70,255:25,0 chr1 155151080 . T . PASS END=155151080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:22,0 chr1 155151081 . T . PASS END=155151085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 155151086 . C . PASS END=155151089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:17,0 chr1 155151285 . G . PASS END=155151290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:30,0 chr1 155151291 . G . PASS END=155151291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 155151292 . C . PASS END=155151292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155151293 . C . PASS END=155151293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 155151294 . A . PASS END=155151295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155151296 . C . PASS END=155151296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 155151297 . G . PASS END=155151301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155151302 . C . PASS END=155151322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,914:0,62,255:25,0 chr1 155152108 . T . PASS END=155152131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 155152132 . C . PASS END=155152199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,687:0,60,255:23,0 chr1 155152200 . T . PASS END=155152202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 155152203 . C . PASS END=155152204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 155152205 . C . PASS END=155152206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 155152207 . A . PASS END=155152208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:21,0 chr1 155152209 . A . PASS END=155152216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 155152217 . G . PASS END=155152237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 155152238 . T . PASS END=155152283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,553:0,48,255:19,0 chr1 155152284 . G . PASS END=155152284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 155152285 . G . PASS END=155152312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,615:0,40,255:19,0 chr1 155152313 . C . PASS END=155152313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155152314 . A . PASS END=155152359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 155152360 . G . PASS END=155152360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr1 155152361 . C . PASS END=155152363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 155152364 . C . PASS END=155152375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,565:0,32,255:13,0 chr1 155152376 . T . PASS END=155152376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 155152377 . G . PASS END=155152377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 155152378 . A . PASS END=155152392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 155152393 . A . PASS END=155152393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 155152394 . C . PASS END=155152399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 155152400 . C . PASS END=155152400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 155152401 . C . PASS END=155152404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 155152405 . C . PASS END=155152410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:8,0 chr1 155152911 . G . PASS END=155152978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:24,0 chr1 155154328 . T . PASS END=155154329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155154330 . C . PASS END=155154340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155154341 . C . PASS END=155154341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 155154342 . C . PASS END=155154342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155154343 . T . PASS END=155154343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 155154344 . C . PASS END=155154344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155154345 . G . PASS END=155154345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 155154346 . A . PASS END=155154346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 155154347 . T . PASS END=155154349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155154350 . C . PASS END=155154350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr1 155154351 . C . PASS END=155154354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155154355 . G . LowGQ END=155154355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:14,0 chr1 155154356 . G . PASS END=155154357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:15,0 chr1 155154358 . G . PASS END=155154358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 155154359 . C . PASS END=155154365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 155154366 . C . PASS END=155154366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155154367 . G . PASS END=155154368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155154369 . G . PASS END=155154369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 155154370 . A . PASS END=155154370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155154371 . G . PASS END=155154371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155154372 . C . PASS END=155154375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 155154376 . T . PASS END=155154376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 155154377 . G . PASS END=155154380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 155154381 . A . PASS END=155154381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr1 155154382 . T . PASS END=155154382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 155154383 . C . PASS END=155154383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155154384 . A . PASS END=155154384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 155154385 . G . PASS END=155154388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155154389 . G . PASS END=155154389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155154390 . G . PASS END=155154398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:19,0 chr1 155154399 . G . PASS END=155154399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 155154400 . C . PASS END=155154401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155154402 . G . PASS END=155154426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:25,0 chr1 155154427 . T . PASS END=155154427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 155154428 . G . PASS END=155154429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 155154430 . T . PASS END=155154430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 155154431 . G . PASS END=155154432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:25,0 chr1 155154433 . T . PASS END=155154433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 155154434 . G . PASS END=155154440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 155154441 . G . PASS END=155154441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 155154442 . A . PASS END=155154448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 155154449 . G . PASS END=155154449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:21,0 chr1 155154450 . C . PASS END=155154450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 155154451 . T . PASS END=155154451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 155154452 . G . PASS END=155154468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,847:0,69,255:24,0 chr1 155154469 . G . PASS END=155154469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:22,0 chr1 155154470 . T . PASS END=155154474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 155154475 . A . PASS END=155154485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 155154486 . G . PASS END=155154486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 155154487 . G . PASS END=155154492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155154493 . T . PASS END=155154493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 155154494 . G . PASS END=155154494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr1 155154495 . G . PASS END=155154495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 155154496 . C . PASS END=155154496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155154497 . T . PASS END=155154497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 155154498 . G . PASS END=155154498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155154499 . T . PASS END=155154499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 155154500 . G . PASS END=155154514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 155154515 . C . PASS END=155154515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 155154516 . T . PASS END=155154534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1127:0,80,255:31,0 chr1 155154535 . A . PASS END=155154535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:27,0 chr1 155154536 . C . PASS END=155154536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 155154537 . C . PASS END=155154537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1143:0,68,255:28,0 chr1 155154538 . C . PASS END=155154623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:31:0,82,1149:0,82,255:40,0 chr1 155154624 . A . PASS END=155154624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1706:0,70,255:40,0 chr1 155154625 . G . PASS END=155154669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1215:0,91,255:40,0 chr1 155154670 . A . PASS END=155154670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1058:0,65,255:27,0 chr1 155154671 . G . PASS END=155154671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 155154672 . T . PASS END=155154672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:27,0 chr1 155154673 . G . PASS END=155154673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155154674 . A . PASS END=155154674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 155156273 . G . PASS END=155156287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 155156288 . C . PASS END=155156307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,529:0,42,255:16,0 chr1 155156308 . A . PASS END=155156308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 155156309 . G . PASS END=155156322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,574:0,48,255:16,0 chr1 155156323 . A . PASS END=155156323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 155156324 . G . PASS END=155156350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,651:0,41,255:19,0 chr1 155156351 . C . PASS END=155156354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155156355 . G . PASS END=155156355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 155156356 . G . PASS END=155156366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 155156367 . A . PASS END=155156367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 155156368 . T . PASS END=155156420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 155156421 . C . PASS END=155156423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 155156424 . A . PASS END=155156426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155156427 . G . PASS END=155156444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:18:0,42,630:0,44,255:18,0 chr1 155156445 . C . PASS END=155156445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155156446 . T . PASS END=155156446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 155156447 . G . PASS END=155156473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 155156474 . C . PASS END=155156557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,601:0,51,255:19,0 chr1 155156558 . G . PASS END=155156559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 155156560 . G . PASS END=155156560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 155156561 . C . PASS END=155156561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 155156562 . C . PASS END=155156576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,706:0,44,255:19,0 chr1 155156577 . A . PASS END=155156577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 155156578 . T . PASS END=155156585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:19,0 chr1 155156586 . G . PASS END=155156586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 155156587 . G . PASS END=155156588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 155156589 . G . PASS END=155156594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:20:0,36,540:0,60,255:13,0 chr1 155156595 . C . PASS END=155156612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 155156613 . G . PASS END=155156618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155156619 . A . PASS END=155156619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 155156620 . A . PASS END=155156630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155156631 . A . PASS END=155156631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 155156632 . A . PASS END=155156641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 155156642 . T . PASS END=155156642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 155156643 . G . PASS END=155156666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 155158611 . C . PASS END=155158612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 155158613 . A . PASS END=155158613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 155158614 . C . PASS END=155158614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155158615 . A . PASS END=155158615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 155158616 . A . PASS END=155158660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,845:0,69,255:25,0 chr1 155158661 . T . PASS END=155158661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 155158662 . G . PASS END=155158668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:22,0 chr1 155158669 . C . PASS END=155158669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 155158670 . C . PASS END=155158672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 155158673 . T . PASS END=155158673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 155158674 . A . PASS END=155158683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155158684 . A . PASS END=155158684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 155158685 . C . PASS END=155158685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155159248 . C . PASS END=155159280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1371:0,95,255:39,0 chr1 155159701 . C . PASS END=155159702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 155159703 . T . PASS END=155159703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:7,0 chr1 155159704 . C . PASS END=155159704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155159705 . T . PASS END=155159705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 155159706 . C . PASS END=155159722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:13,0 chr1 155159723 . G . PASS END=155159750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,551:0,40,255:19,0 chr1 155159751 . G . PASS END=155159751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 155159752 . G . PASS END=155159752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 155159753 . G . PASS END=155159763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:25,0 chr1 155159764 . G . PASS END=155159764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 155159765 . G . PASS END=155159825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,876:0,69,255:26,0 chr1 155159826 . T . PASS END=155159826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:21,0 chr1 155159827 . C . PASS END=155159850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 155159931 . C . PASS END=155160052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:33:0,82,1141:0,82,255:40,0 chr1 155160198 . C . PASS END=155160198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 155160199 . G . PASS END=155160199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 155160200 . C . PASS END=155160203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 155160204 . C . PASS END=155160204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 155160205 . G . PASS END=155160217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1062:0,87,255:30,0 chr1 155160218 . A . PASS END=155160218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 155160219 . G . PASS END=155160334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:31:0,80,1163:0,80,255:40,0 chr1 155160484 . C . PASS END=155160539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,132,255:40,0 chr1 155160639 . C . PASS END=155160639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 155160640 . A . PASS END=155160640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155160641 . T . PASS END=155160643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155160644 . C . PASS END=155160644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155160645 . A . PASS END=155160645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 155160646 . G . PASS END=155160648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1117:0,80,255:31,0 chr1 155160649 . A . PASS END=155160649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:29,0 chr1 155160650 . T . PASS END=155160663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:31,0 chr1 155160664 . T . PASS END=155160664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 155160665 . C . PASS END=155160677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:31:0,85,1118:0,85,255:31,0 chr1 155160678 . G . PASS END=155160678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 155160679 . G . PASS END=155160704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:33,0 chr1 155160705 . A . PASS END=155160705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr1 155160706 . A . PASS END=155160706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1148:0,83,255:31,0 chr1 155160707 . A . PASS END=155160707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1003:0,66,255:30,0 chr1 155160708 . C . PASS END=155160714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1180:0,83,255:32,0 chr1 155160715 . T . PASS END=155160715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,939:0,79,255:30,0 chr1 155160716 . T . PASS END=155160793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:32:0,82,1111:0,82,255:40,0 chr1 155160794 . G . PASS END=155160794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1415:0,77,255:40,0 chr1 155160795 . A . PASS END=155161130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:43:0,89,1487:0,89,255:40,1 chr1 155161131 . G . PASS END=155161167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:85:0,120,1800:0,187,255:40,2 chr1 155161168 . C G, 50.00 PASS DP=87;MQ=123.67;MQRankSum=-1.377;ReadPosRankSum=5.790;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,51,0:0.600,0.000:85:19,29,0:15,22,0:47:85,0,47,1719,1180,2906:255,0,255:32,0:5.0000e+01,8.5683e-05,5.0116e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,17,20,31:22,12,36,15 chr1 155161169 . G . PASS END=155161205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,3:93:99:89:0,120,1800:0,176,255:40,0 chr1 155161206 . G . PASS END=155161251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,125,255:40,0 chr1 155161252 . A . PASS END=155161252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:62:58:0,62,1701:0,62,255:40,0 chr1 155161253 . C . PASS END=155161257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:54:0,99,1800:0,99,255:40,0 chr1 155161258 . T . PASS END=155161258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:37:53:0,37,1550:0,37,255:38,0 chr1 155161259 . G . PASS END=155161267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,103,1530:0,103,255:40,0 chr1 155161268 . G . PASS END=155161269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:68:46:0,68,1365:0,68,255:37,0 chr1 155161270 . G . PASS END=155161271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:41:46:0,41,1335:0,41,255:34,0 chr1 155161272 . G . PASS END=155161272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1528:0,74,255:35,0 chr1 155161273 . G . PASS END=155161273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:16:45:0,16,1392:0,16,255:34,0 chr1 155161274 . T . PASS END=155161275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,99,1480:0,99,255:38,0 chr1 155161276 . G . PASS END=155161277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:43:0,60,1406:0,60,255:32,0 chr1 155161278 . G . PASS END=155161279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:42:0,93,1390:0,93,255:35,0 chr1 155161280 . C . PASS END=155161280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:15:42:0,15,1243:0,15,255:29,0 chr1 155161281 . C . LowGQ END=155161281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:0:42:0,0,1164:1,0,255:28,0 chr1 155161282 . G . PASS END=155161282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1302:0,67,255:30,0 chr1 155161283 . G . PASS END=155161285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1238:0,84,255:32,0 chr1 155161286 . C . PASS END=155161286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:47:38:0,47,1103:0,47,255:28,0 chr1 155161287 . C . PASS END=155161287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1097:0,72,255:30,0 chr1 155161288 . G . PASS END=155161288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1181:0,88,255:31,0 chr1 155161289 . G . PASS END=155161289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1095:0,72,255:30,0 chr1 155161290 . C . PASS END=155161290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1143:0,85,255:31,0 chr1 155161291 . C . PASS END=155161291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1058:0,69,255:30,0 chr1 155161292 . T . PASS END=155161292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,956:0,49,255:27,0 chr1 155161293 . G . PASS END=155161293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1076:0,66,255:27,0 chr1 155161294 . G . PASS END=155161294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1008:0,49,255:27,0 chr1 155161295 . T . PASS END=155161295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1058:0,82,255:28,0 chr1 155161296 . G . PASS END=155161296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:28,0 chr1 155161297 . T . PASS END=155161298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,992:0,46,255:27,1 chr1 155161299 . C . PASS END=155161299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:15:32:0,15,809:0,15,255:26,1 chr1 155161300 . G . PASS END=155161300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:28:32:0,28,907:0,28,255:26,1 chr1 155161301 . G . LowGQ END=155161301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,926:3,0,255:25,1 chr1 155161302 . G . PASS END=155161302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:14:32:0,14,943:0,14,255:26,1 chr1 155161303 . G . PASS END=155161303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:27:31:0,27,946:0,27,255:26,1 chr1 155161304 . C . LowGQ END=155161304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:0:30:0,0,744:5,0,255:27,0 chr1 155161305 . C . PASS END=155161305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:26,0 chr1 155161306 . G . PASS END=155161306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:27,0 chr1 155161307 . A . PASS END=155161307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,854:0,18,255:24,0 chr1 155161308 . G . PASS END=155161308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:1:30:0,1,792:0,1,255:22,0 chr1 155161309 . G . PASS END=155161309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,892:0,18,255:25,0 chr1 155161310 . T . PASS END=155161311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,917:0,43,255:22,0 chr1 155161312 . A . LowGQ END=155161312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,5:30:0:30:0,0,648:58,0,255:17,0 chr1 155161313 . C . PASS END=155161313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,900:0,40,255:18,0 chr1 155161314 . A . PASS END=155161315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:24:30:0,24,845:0,24,255:19,0 chr1 155161316 . C . LowGQ END=155161316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,5:30:0:30:0,0,826:7,0,255:14,0 chr1 155161317 . G . PASS END=155161317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:30:0,48,720:0,90,255:16,0 chr1 155161318 . T . LowGQ END=155161319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,727:0,0,255:13,0 chr1 155161320 . G . PASS END=155161321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,720:0,42,255:16,0 chr1 155161322 . C . PASS END=155161322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:14:26:0,14,715:0,14,255:16,0 chr1 155161323 . T . PASS END=155161323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,609:0,25,255:12,0 chr1 155161324 . G . PASS END=155161324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:13,0 chr1 155161325 . G . PASS END=155161325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:22:0,42,630:0,49,255:13,0 chr1 155161326 . G . PASS END=155161327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:33:20:0,33,495:0,35,255:13,0 chr1 155161328 . G . PASS END=155161328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:9,0 chr1 155161329 . G . PASS END=155161329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:10,0 chr1 155161330 . G . PASS END=155161330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:27:19:0,27,405:0,40,255:8,0 chr1 155161331 . C . PASS END=155161331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,545:0,10,255:8,0 chr1 155161332 . G . PASS END=155161333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:30:19:0,30,450:0,40,255:10,0 chr1 155161334 . T . PASS END=155161335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr1 155161336 . G . PASS END=155161337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:18:17:0,18,270:0,35,255:6,0 chr1 155161338 . G . LowGQ END=155161338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,449:10,0,255:5,0 chr1 155161339 . C . PASS END=155161340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:18:14:0,18,270:0,42,255:6,0 chr1 155161341 . C . PASS END=155161341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,380:0,9,255:5,0 chr1 155161342 . G . PASS END=155161346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:10:0,12,180:0,16,255:6,0 chr1 155161347 . C . LowGQ END=155161347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,149:18,0,167:4,0 chr1 155161348 . G . PASS END=155161348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,247:4,0 chr1 155161349 . G . PASS END=155161353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,135:0,4,149:3,0 chr1 155161354 . G . LowGQ END=155161363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:3:0,0,55:0,0,60:3,0 chr1 155161364 . C . PASS END=155161366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 155161367 . A . LowGQ END=155161367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,2:4:0:4:0,0,14:21,0,36:2,0 chr1 155161368 . G . PASS END=155161369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 155161370 . T . LowGQ END=155161427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,1:3:0:2:0,0,0:0,0,0:3,0 chr1 155161428 . G . PASS END=155161428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 155161429 . G . PASS END=155161430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:4,0 chr1 155161431 . G . LowGQ END=155161431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 155161432 . A . PASS END=155161432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 155161433 . C . LowGQ END=155161436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:4:0,0,94:0,0,96:3,0 chr1 155161437 . G . PASS END=155161437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 155161438 . T . LowGQ END=155161438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 155161439 . G . PASS END=155161441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 155161442 . C . LowGQ END=155161443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,3:7:0:7:0,0,53:12,0,118:4,0 chr1 155161444 . G . PASS END=155161448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 155161449 . G . LowGQ END=155161451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,69:10,0,112:6,0 chr1 155161452 . G . PASS END=155161453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 155161454 . T . LowGQ END=155161454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:15,0,137:4,0 chr1 155161455 . G . PASS END=155161456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 155161457 . A . PASS END=155161457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 155161458 . G . PASS END=155161458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 155161459 . C . PASS END=155161459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 155161460 . C . PASS END=155161460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 155161461 . C . LowGQ END=155161461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,108:29,0,137:4,0 chr1 155161462 . G . PASS END=155161465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 155161466 . C . LowGQ END=155161467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:0,0,137:5,0 chr1 155161468 . G . PASS END=155161468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 155161469 . G . PASS END=155161469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 155161470 . C . LowGQ END=155161472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,78:0,0,115:5,0 chr1 155161473 . G . PASS END=155161473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 155161474 . G . LowGQ END=155161477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,122:0,0,133:5,0 chr1 155161478 . C . PASS END=155161486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 155161487 . A . PASS END=155161487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 155161488 . G . PASS END=155161498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,164:0,18,164:6,0 chr1 155161499 . G . PASS END=155161501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 155161502 . C . PASS END=155161503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,149:0,4,149:6,0 chr1 155161504 . G T, 2.31 DRAGENSnpHardQUAL DP=5;MQ=4.34;MQRankSum=-1.026;ReadPosRankSum=1.026;FractionInformativeReads=0.800;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:2,2,0:0.500,0.000:4:1,2,0:1,0,0:4:33,0,9,43,57,100:34,0,143:4,0:2.3116e+00,4.1093e+00,1.6109e+01,4.6824e+01,9.6078e+01,1.0702e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,1,2,0:2,0,2,0 chr1 155161505 . G . LowGQ END=155161505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:5,0 chr1 155161506 . G . PASS END=155161508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 155161509 . G . LowGQ END=155161509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:5,0 chr1 155161510 . G . PASS END=155161530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,166:0,15,166:6,0 chr1 155161531 . C . PASS END=155161531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 155161532 . T . PASS END=155161533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 155161534 . G . PASS END=155161534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 155161535 . T . PASS END=155161535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr1 155161536 . G . PASS END=155161540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 155161541 . G . PASS END=155161541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr1 155161542 . G . PASS END=155161543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,197:0,21,197:7,0 chr1 155161544 . C . LowGQ END=155161545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,153:0,0,165:6,0 chr1 155161546 . G . PASS END=155161548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 155161549 . G . PASS END=155161549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 155161550 . T . PASS END=155161551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 155161552 . A . PASS END=155161553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr1 155161554 . A . PASS END=155161555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:5,0 chr1 155161556 . C . PASS END=155161559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 155161560 . G . PASS END=155161560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 155161561 . G . PASS END=155161561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 155161562 . C . PASS END=155161563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:4:7:0,4,148:0,4,148:6,0 chr1 155161564 . G . PASS END=155161565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 155161566 . G . PASS END=155161566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 155161567 . G . PASS END=155161568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:5,0 chr1 155161569 . G . LowGQ END=155161586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:0:5:0,0,83:0,0,101:5,0 chr1 155161587 . C T, 5.45 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=2.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:105,15,0:0,0:5.4528e+00,4.4732e+00,4.4635e+00,4.0223e+01,3.9243e+01,4.3223e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,0:0,0,1,0 chr1 155161588 . G . LowGQ END=155161625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,1:5:0:3:0,0,0:0,0,0:8,0 chr1 155161626 . G . PASS END=155161626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:9,0 chr1 155161627 . C . LowGQ END=155161629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,127:50,0,177:9,0 chr1 155161630 . G . PASS END=155161630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 155161631 . G . LowGQ END=155161631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,255:33,0,255:10,0 chr1 155161632 . G . PASS END=155161632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:9,0 chr1 155161633 . G . LowGQ END=155161638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:13:0,0,225:0,0,236:14,0 chr1 155161639 . C . PASS END=155161639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:14,0 chr1 155161640 . T . PASS END=155161640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,465:0,4,255:15,0 chr1 155161641 . G . PASS END=155161641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:17,0 chr1 155161642 . G C, 27.72 PASS DP=16;MQ=65.83;MQRankSum=-0.387;ReadPosRankSum=0.143;FractionInformativeReads=0.688;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,5,0:0.455,0.000:11:4,3,0:2,2,0:28:62,0,42,162,162,162:222,0,255:9,0:2.7722e+01,7.4896e-03,4.4757e+01,1.6249e+02,1.9726e+02,1.6550e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,2,5,0:2,4,3,2 chr1 155161643 . T . LowGQ END=155161643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,480:51,0,255:16,0 chr1 155161644 . G C, 24.20 PASS DP=20;MQ=67.62;MQRankSum=-0.884;ReadPosRankSum=0.766;FractionInformativeReads=0.750;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,6,0:0.400,0.000:15:6,4,0:3,2,0:24:59,0,42,159,159,159:225,0,255:13,0:2.4202e+01,1.6681e-02,4.4767e+01,1.5897e+02,1.9374e+02,1.6198e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,3,6,0:3,6,4,2 chr1 155161645 . T . LowGQ END=155161645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,5:24:0:24:0,0,549:55,0,255:19,0 chr1 155161646 . C . PASS END=155161646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,807:0,36,255:23,0 chr1 155161647 . C . PASS END=155161647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,654:0,25,255:21,0 chr1 155161648 . G . PASS END=155161648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 155161649 . G . PASS END=155161649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,717:0,19,255:22,0 chr1 155161650 . G . LowGQ END=155161652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,5:26:0:25:0,0,635:0,0,255:23,0 chr1 155161653 . C . PASS END=155161654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,842:0,64,255:25,0 chr1 155161655 . A . PASS END=155161655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:1:30:0,1,845:0,1,255:26,0 chr1 155161656 . G . PASS END=155161656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1013:0,62,255:29,0 chr1 155161657 . G . LowGQ END=155161658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:32:0,0,862:6,0,255:28,0 chr1 155161659 . G . PASS END=155161660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1044:0,68,255:32,0 chr1 155161661 . C . PASS END=155161661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1084:0,55,255:30,0 chr1 155161662 . A . PASS END=155161662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:31:38:0,31,1047:0,31,255:33,0 chr1 155161663 . C . PASS END=155161664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:89:41:0,89,1285:0,89,255:39,0 chr1 155161665 . G . PASS END=155161666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1234:0,62,255:40,0 chr1 155161667 . G . PASS END=155161668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1410:0,90,255:40,0 chr1 155161669 . G . PASS END=155161670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:43:0,60,1269:0,60,255:40,0 chr1 155161671 . T . PASS END=155161671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,115,1402:0,115,255:40,0 chr1 155161672 . T G, 48.13 PASS DP=39;MQ=91.63;MQRankSum=-0.155;ReadPosRankSum=0.086;FractionInformativeReads=0.872;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,16,0:0.471,0.000:34:11,8,0:7,8,0:46:83,0,46,183,183,183:255,0,255:24,0:4.8127e+01,1.2141e-04,4.9000e+01,1.8290e+02,2.1767e+02,1.8591e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,6,12,4:9,9,10,6 chr1 155161673 . G C, 48.13 PASS DP=39;MQ=91.63;MQRankSum=0.542;ReadPosRankSum=-0.227;FractionInformativeReads=0.872;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,14,0:0.412,0.000:34:12,7,0:8,7,0:46:83,0,46,183,183,183:255,0,255:29,0:4.8127e+01,1.2141e-04,4.9000e+01,1.8290e+02,2.1767e+02,1.8591e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,8,12,2:10,10,9,5 chr1 155161674 . G . PASS END=155161676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:44:0,115,1491:0,115,255:40,0 chr1 155161677 . G C, 48.13 PASS DP=41;MQ=92.91;MQRankSum=0.683;ReadPosRankSum=-0.650;FractionInformativeReads=0.854;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,15,0:0.429,0.000:35:12,7,0:8,8,0:46:83,0,46,183,183,183:255,0,255:26,0:4.8127e+01,1.2141e-04,4.9000e+01,1.8290e+02,2.1767e+02,1.8591e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,8,13,2:10,10,9,6 chr1 155161678 . G . PASS END=155161678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1521:0,105,255:40,0 chr1 155161679 . C . PASS END=155161679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,6:48:44:48:0,44,1259:0,44,255:40,0 chr1 155161680 . G . PASS END=155161699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:90:50:0,90,1623:0,90,255:40,0 chr1 155161700 . T . PASS END=155161700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:78:61:0,78,1816:0,78,255:40,0 chr1 155161701 . G . PASS END=155161704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:61:0,120,1800:0,141,255:40,0 chr1 155161705 . T . PASS END=155161705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,8:67:68:67:0,68,1901:0,68,255:40,0 chr1 155161706 . C . PASS END=155161719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:67:0,120,1800:0,146,255:40,0 chr1 155161720 . A . PASS END=155162029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:46:0,86,1713:0,86,255:40,0 chr1 155162030 . T . PASS END=155162059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:38:0,90,1350:0,110,255:40,0 chr1 155162060 . C . PASS END=155162066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:26,0 chr1 155162067 . C T, 48.70 PASS DP=30;MQ=249.97;MQRankSum=3.892;ReadPosRankSum=0.209;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,13,0:0.433,0.000:30:9,5,0:8,8,0:47:83,0,50,420,608,1028:255,0,255:16,0:4.8704e+01,8.0247e-05,5.3000e+01,4.2018e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,5,8:9,8,7,6 chr1 155162068 . G . PASS END=155162078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 155162079 . T . PASS END=155162079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,887:0,45,255:23,0 chr1 155162080 . G . PASS END=155162080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 155162081 . C . PASS END=155162093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:19:0,45,675:0,57,255:19,0 chr1 155162094 . T . PASS END=155162094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:14,0 chr1 155162095 . G . PASS END=155162098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 155162099 . T . PASS END=155162101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 155162577 . C . PASS END=155162583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr1 155162584 . C . PASS END=155162584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 155162585 . A . PASS END=155162611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 155162612 . G . PASS END=155162615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155162616 . A . PASS END=155162623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,909:0,67,255:26,0 chr1 155162624 . C . PASS END=155162624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:24,0 chr1 155162625 . C . PASS END=155162634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 155165632 . T . PASS END=155165647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1086:0,80,255:32,0 chr1 155165648 . A . PASS END=155165648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:30,0 chr1 155165649 . G . PASS END=155165666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1163:0,80,255:31,0 chr1 155165667 . G . PASS END=155165680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1000:0,68,255:26,0 chr1 155165681 . G . PASS END=155165682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155165683 . C . PASS END=155165690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 155165778 . C . PASS END=155165782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 155165783 . C . PASS END=155165785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 155165786 . C . PASS END=155165800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:19:0,43,653:0,43,255:19,0 chr1 155165801 . G . PASS END=155165802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 155165803 . C . PASS END=155165803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155165804 . C . PASS END=155165806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155165807 . A . PASS END=155165807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 155165808 . T . PASS END=155165818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,723:0,63,255:21,0 chr1 155165819 . T . PASS END=155165819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 155165820 . G . PASS END=155165824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 155165825 . A . PASS END=155165825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 155165826 . A . PASS END=155165826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 155165827 . G . PASS END=155165829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155165830 . G . PASS END=155165832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 155165833 . T . PASS END=155165834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 155165835 . C . PASS END=155165839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,894:0,64,255:25,0 chr1 155165840 . A . PASS END=155165840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 155165841 . G . PASS END=155165841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 155165842 . A . PASS END=155165842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 155165843 . C . PASS END=155165855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,880:0,75,255:25,0 chr1 155165856 . T . PASS END=155165856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 155165857 . G . PASS END=155165862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:24,0 chr1 155165863 . G . PASS END=155165863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:22,0 chr1 155165864 . T . PASS END=155165865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr1 155165866 . A . PASS END=155165866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 155165867 . A . PASS END=155165869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 155165870 . A . PASS END=155165870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 155165871 . T . PASS END=155165872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155165873 . A . PASS END=155165873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 155165874 . C . PASS END=155165877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155165878 . A . PASS END=155165878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 155165879 . G . PASS END=155165891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 155165892 . G . PASS END=155165892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 155165893 . C . PASS END=155165895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 155165896 . G . PASS END=155165896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 155165897 . G . PASS END=155165899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 155165900 . C . PASS END=155165907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,52,255:19,0 chr1 155165908 . G . PASS END=155165917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:17:0,39,585:0,51,255:13,0 chr1 155166832 . C . PASS END=155166843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 155166844 . A . PASS END=155166844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,442:0,31,255:14,0 chr1 155166845 . C . PASS END=155166876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:18,0 chr1 155166877 . G . PASS END=155166880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,754:0,60,255:21,0 chr1 155166881 . T . PASS END=155166881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 155166882 . C . PASS END=155166922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,772:0,63,255:26,0 chr1 155166923 . G . PASS END=155166927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155166928 . A . PASS END=155166936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 155166937 . G . PASS END=155166937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155166938 . G . PASS END=155166938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 155166939 . G . PASS END=155166945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1133:0,80,255:29,0 chr1 155166946 . C . PASS END=155166968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,984:0,77,255:26,0 chr1 155166969 . G . PASS END=155166974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 155166975 . C . PASS END=155166975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 155166976 . T . PASS END=155166980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 155166981 . T . PASS END=155166994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,841:0,72,255:25,0 chr1 155166995 . A . PASS END=155166995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 155166996 . T . PASS END=155167004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 155167254 . C . PASS END=155167254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr1 155167255 . T . PASS END=155167255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155167256 . T . PASS END=155167256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 155167257 . G . PASS END=155167257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155167258 . A . PASS END=155167270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:23,0 chr1 155167271 . G . PASS END=155167271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 155167272 . C . PASS END=155167273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 155167274 . G . PASS END=155167276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 155167277 . C . PASS END=155167278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 155167279 . A . PASS END=155167279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:23,0 chr1 155167280 . C . PASS END=155167280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 155167281 . C . PASS END=155167281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 155167282 . G . PASS END=155167282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 155167283 . C . PASS END=155167283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 155167284 . C . PASS END=155167285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 155167286 . G . PASS END=155167286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155167287 . G . PASS END=155167290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 155167291 . G . PASS END=155167381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1192:0,83,255:39,0 chr1 155167382 . A . PASS END=155167382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:31,0 chr1 155167383 . G . PASS END=155167389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1266:0,91,255:33,0 chr1 155167390 . T . PASS END=155167390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr1 155167391 . C . PASS END=155167396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1196:0,85,255:31,0 chr1 155167397 . C . PASS END=155167397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:26,0 chr1 155167398 . T . PASS END=155167399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 155167400 . T . PASS END=155167403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:32:0,61,1125:0,61,255:26,0 chr1 155167404 . C . PASS END=155167404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:23,0 chr1 155167405 . A . PASS END=155167407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:24,0 chr1 155167408 . T . PASS END=155167408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:24,0 chr1 155167409 . G . PASS END=155167411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:25,0 chr1 155167412 . A . PASS END=155167412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:23,0 chr1 155167413 . G . PASS END=155167413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 155167414 . G . PASS END=155167414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:24,0 chr1 155167415 . T . LowGQ END=155167415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,692:11,0,255:22,0 chr1 155167416 . G . PASS END=155167416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:23,0 chr1 155167417 . C . PASS END=155167424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,782:0,42,255:24,0 chr1 155167425 . G . PASS END=155167425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 155167426 . T . PASS END=155167426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,784:0,23,255:21,0 chr1 155167427 . C . PASS END=155167428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:23,0 chr1 155167429 . A . PASS END=155167429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr1 155167430 . C . PASS END=155167430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:20,0 chr1 155167431 . A . PASS END=155167432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,61,255:18,0 chr1 155167433 . C . PASS END=155167433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,836:0,31,255:16,0 chr1 155167434 . A . PASS END=155167434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,770:0,9,255:18,0 chr1 155167435 . T . PASS END=155167435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 155167436 . T . PASS END=155167436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,850:0,42,255:20,0 chr1 155167437 . G . PASS END=155167437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,64,255:19,0 chr1 155167438 . A . PASS END=155167439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,859:0,31,255:17,0 chr1 155167440 . G . PASS END=155167441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:25:0,51,765:0,58,255:17,0 chr1 155167442 . C . LowGQ END=155167443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:22:0,0,516:13,0,255:13,0 chr1 155167444 . G . PASS END=155167445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:33:22:0,33,585:0,33,255:15,0 chr1 155167446 . G . PASS END=155167446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,653:0,19,255:11,0 chr1 155167447 . T . PASS END=155167447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 155167448 . A . LowGQ END=155167450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:21:0,0,471:0,0,255:10,0 chr1 155167671 . C . PASS END=155167719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:64:0,120,1800:0,174,255:40,0 chr1 155167833 . C . PASS END=155167840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:31,0 chr1 155167841 . G . PASS END=155167843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:30,0 chr1 155167844 . C . PASS END=155168011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1337:0,84,255:40,0 chr1 155168200 . C . PASS END=155168378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1070:0,81,255:40,0 chr1 155168379 . T . PASS END=155168379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:32,0 chr1 155168380 . G . PASS END=155168393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1186:0,83,255:33,0 chr1 155169595 . C . PASS END=155169610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,102,1250:0,102,255:38,0 chr1 155169611 . C . PASS END=155169611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 155169612 . A . PASS END=155169647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1218:0,86,255:37,0 chr1 155169773 . C . PASS END=155169884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:34:0,90,1350:0,102,255:40,0 chr1 155169885 . G . PASS END=155169885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr1 155169886 . T . PASS END=155169890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:30,0 chr1 155169891 . T . PASS END=155169891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:25,0 chr1 155169892 . C . PASS END=155169893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 155169894 . A . PASS END=155169898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:27,0 chr1 155169899 . G . PASS END=155169900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155169901 . A . PASS END=155169903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 155169904 . C . PASS END=155169904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:26,0 chr1 155170242 . C . PASS END=155170373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:92:43:0,92,1438:0,92,255:40,0 chr1 155170374 . C . PASS END=155170374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1262:0,65,255:32,0 chr1 155170375 . T . PASS END=155170383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,102,1530:0,109,255:35,0 chr1 155170384 . G . PASS END=155170384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1277:0,79,255:35,0 chr1 155170385 . A . PASS END=155170390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:95:40:0,95,1348:0,95,255:38,0 chr1 155170391 . C . PASS END=155170391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1136:0,56,255:34,0 chr1 155170392 . G . PASS END=155170394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:41:0,89,1253:0,89,255:37,0 chr1 155170395 . A . PASS END=155170395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:34:41:0,34,1144:0,34,255:34,0 chr1 155170396 . G . PASS END=155170396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:42:41:0,42,1087:0,42,255:34,0 chr1 155170397 . T . PASS END=155170399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,103,255:35,0 chr1 155170400 . T . PASS END=155170400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1026:0,66,255:31,0 chr1 155170401 . C . PASS END=155170401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1311:0,84,255:32,0 chr1 155170688 . C . PASS END=155170692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1034:0,90,255:30,0 chr1 155170693 . C . PASS END=155170693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 155170694 . A . PASS END=155170757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1066:0,90,255:40,0 chr1 155170758 . T . PASS END=155170758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:28:39:0,28,1103:0,28,255:32,0 chr1 155170759 . C . PASS END=155170795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1291:0,81,255:37,0 chr1 155170885 . C . PASS END=155170887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 155170888 . T . PASS END=155170888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,646:0,38,255:21,0 chr1 155170889 . T . PASS END=155170891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 155170892 . C . PASS END=155170892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 155170893 . A . PASS END=155170914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,65,255:26,0 chr1 155170915 . G . PASS END=155170920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:29,0 chr1 155170921 . T . PASS END=155170921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 155170922 . G . PASS END=155170935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1117:0,90,255:31,0 chr1 155170936 . G . PASS END=155170962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 155170963 . C . PASS END=155170990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,47,255:19,0 chr1 155170991 . T . PASS END=155170995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 155171208 . C . PASS END=155171208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 155171209 . T . PASS END=155171217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 155171218 . A . PASS END=155171218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 155171219 . C . PASS END=155171222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 155171223 . A . PASS END=155171223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 155171224 . C . PASS END=155171225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 155171226 . A . PASS END=155171226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 155171227 . T . PASS END=155171240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr1 155171241 . A . PASS END=155171241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,537:0,15,255:17,0 chr1 155171242 . C . PASS END=155171247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr1 155171248 . G . PASS END=155171250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 155171251 . T . PASS END=155171251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155171252 . G . PASS END=155171254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155171255 . T . PASS END=155171257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155171258 . G . PASS END=155171260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 155171261 . A . PASS END=155171261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 155171262 . G . PASS END=155171293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 155171294 . C . PASS END=155171294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 155171295 . T . PASS END=155171346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,884:0,66,255:25,0 chr1 155171347 . C . PASS END=155171360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 155171748 . C . PASS END=155171825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:53:0,120,1800:0,122,255:40,0 chr1 155172052 . C . PASS END=155172066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr1 155172067 . G . PASS END=155172092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,764:0,63,255:26,0 chr1 155172093 . C . PASS END=155172098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr1 155172099 . T . PASS END=155172100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 155172101 . C . PASS END=155172126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 155172127 . A . PASS END=155172127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:26,0 chr1 155172128 . C . PASS END=155172129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 155172130 . G . PASS END=155172133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155172134 . A . PASS END=155172134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:25,0 chr1 155172135 . A . PASS END=155172141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 155172142 . C . PASS END=155172146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,972:0,70,255:25,0 chr1 155172147 . T . PASS END=155172154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 155172155 . C . PASS END=155172155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,917:0,53,255:27,0 chr1 155172156 . A . PASS END=155172165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 155172166 . C . PASS END=155172188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,68,255:26,0 chr1 155172189 . C . PASS END=155172192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 155172603 . C . PASS END=155172605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 155172606 . A . LowGQ END=155172606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 155172607 . T . PASS END=155172607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 155172608 . T . PASS END=155172612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 155172613 . T . PASS END=155172619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,490:0,42,255:17,0 chr1 155172620 . A . PASS END=155172620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 155172621 . G . PASS END=155172623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155172624 . G . PASS END=155172624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 155172625 . G . PASS END=155172628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155172629 . C . PASS END=155172629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 155172630 . G . PASS END=155172637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,666:0,54,255:19,0 chr1 155172638 . G . PASS END=155172646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:23,0 chr1 155172647 . G . PASS END=155172647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 155172648 . G . PASS END=155172650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 155172651 . G . PASS END=155172651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 155172652 . C . PASS END=155172652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 155172653 . A . PASS END=155172653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 155172654 . G . PASS END=155172680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,831:0,62,255:26,0 chr1 155172681 . G . PASS END=155172682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 155172683 . A . PASS END=155172686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1008:0,68,255:26,0 chr1 155172687 . T . PASS END=155172692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 155172693 . G . PASS END=155172695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 155172696 . G . PASS END=155172703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1163:0,80,255:29,0 chr1 155172704 . C . PASS END=155172704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:28,0 chr1 155172705 . T . PASS END=155172707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 155172708 . G . PASS END=155172708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 155172709 . A . PASS END=155172714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1019:0,87,255:29,0 chr1 155172715 . G . PASS END=155172715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 155172716 . G . PASS END=155172718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 155172719 . T . PASS END=155172720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 155172721 . G . PASS END=155172722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 155172723 . G . PASS END=155172723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:27,0 chr1 155172724 . C . PASS END=155172734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 155172735 . A . PASS END=155172736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 155172737 . G . PASS END=155172738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 155172739 . T . PASS END=155172739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155172740 . G . PASS END=155172751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 155172877 . C . PASS END=155172928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:40:0,97,1582:0,97,255:40,0 chr1 155173014 . C . PASS END=155173096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,108,1673:0,108,255:40,0 chr1 155173304 . C . PASS END=155173329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:41:0,93,1477:0,93,255:40,0 chr1 155173330 . A . PASS END=155173330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:34,0 chr1 155174646 . C . PASS END=155174748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,106,1352:0,106,255:40,0 chr1 155174851 . C . PASS END=155174903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1440:0,105,255:40,2 chr1 155174904 . C . PASS END=155174904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1504:0,60,255:39,2 chr1 155174905 . C . PASS END=155174905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1457:0,49,255:39,0 chr1 155174906 . G . PASS END=155175107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:41:0,84,1260:0,113,255:40,0 chr1 155175991 . C . PASS END=155175991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 155175992 . T . PASS END=155175993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,71,255:23,0 chr1 155175994 . T . PASS END=155175994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 155175995 . G . PASS END=155176000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 155176001 . C . PASS END=155176001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:21,0 chr1 155176002 . T . PASS END=155176008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr1 155176009 . C . PASS END=155176187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1016:0,81,255:40,0 chr1 155176188 . A . PASS END=155176192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:25,0 chr1 155176193 . A . PASS END=155176193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:24,0 chr1 155176194 . A . PASS END=155176197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 155176762 . T . PASS END=155176774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 155176775 . A . PASS END=155176780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 155176781 . A . PASS END=155176781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 155176782 . C . PASS END=155176789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 155176790 . A . PASS END=155176790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,243:0,13,243:9,0 chr1 155176791 . T . LowGQ END=155176791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:3,0,255:8,0 chr1 155176792 . T . PASS END=155176792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 155176793 . T . PASS END=155176793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 155176794 . G . PASS END=155176794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 155176795 . A . PASS END=155176797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 155176798 . T . LowGQ END=155176798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:9,0 chr1 155176799 . G . PASS END=155176813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,366:0,33,255:13,0 chr1 155176814 . C . PASS END=155176814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 155176815 . G . PASS END=155176817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 155176818 . A . PASS END=155176819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,397:0,25,255:13,0 chr1 155176820 . G . PASS END=155176825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:43:16:0,43,675:0,43,255:19,0 chr1 155176826 . G . PASS END=155176849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,837:0,62,255:26,0 chr1 155176850 . G . PASS END=155176856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr1 155176857 . G . PASS END=155176857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 155176858 . G . PASS END=155176974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1094:0,81,255:40,0 chr1 155176975 . A . PASS END=155176979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:29:0,74,1170:0,74,255:26,0 chr1 155176980 . C . PASS END=155176990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 155176991 . G . PASS END=155177011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 155177589 . C . PASS END=155177621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:23,0 chr1 155177622 . A . PASS END=155177636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr1 155177637 . C . LowGQ END=155177637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:17,0,255:16,0 chr1 155177638 . C . PASS END=155177640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,681:0,41,255:16,0 chr1 155177641 . G . PASS END=155177642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:15,0 chr1 155177643 . C . PASS END=155177644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 155177645 . C . PASS END=155177645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 155177646 . C . LowGQ END=155177646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:26,0,255:14,0 chr1 155177647 . C . PASS END=155177651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 155177652 . G . PASS END=155177652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,566:0,20,255:14,0 chr1 155177653 . T . PASS END=155177653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 155177654 . T . PASS END=155177654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155177655 . C . PASS END=155177657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr1 155177658 . G . PASS END=155177658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155177659 . C . PASS END=155177661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,474:0,9,255:13,0 chr1 155177662 . C . PASS END=155177663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155177664 . C . PASS END=155177665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 155177666 . A . PASS END=155177666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155177667 . T . PASS END=155177667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,480:0,6,255:13,0 chr1 155178596 . A . PASS END=155178600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr1 155178601 . G . PASS END=155178612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 155178613 . C . PASS END=155178638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 155178639 . G . PASS END=155178654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 155178655 . G . PASS END=155178696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:16:0,43,637:0,43,255:19,0 chr1 155178697 . C . PASS END=155178697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 155178698 . T . PASS END=155178698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155178699 . G . PASS END=155178700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 155178701 . C . PASS END=155178702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155178703 . C . PASS END=155178703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 155178704 . A . PASS END=155178704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 155178705 . G . PASS END=155178706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 155178707 . C . PASS END=155178707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 155178708 . G . PASS END=155178708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 155178709 . C . PASS END=155178713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,698:0,44,255:20,0 chr1 155178714 . G . PASS END=155178714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 155178715 . A . PASS END=155178715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 155178716 . C . PASS END=155178716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 155178717 . C . PASS END=155178717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155178718 . C . PASS END=155178718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 155178719 . C . PASS END=155178719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 155178720 . G . PASS END=155178720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155178721 . C . PASS END=155178721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 155178722 . T . PASS END=155178724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155178725 . C . PASS END=155178725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 155178726 . C . PASS END=155178726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155178727 . A . PASS END=155178727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 155178728 . G . PASS END=155178728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155178729 . A . PASS END=155178729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr1 155178730 . G . PASS END=155178731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155178732 . C . PASS END=155178732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr1 155178733 . T . PASS END=155178744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr1 155178745 . A . PASS END=155178779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:18,0 chr1 155178780 . A . PASS END=155178780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,468:0,31,255:13,0 chr1 155178781 . C . PASS END=155178781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155178782 . A T, 49.55 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=1.482;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,7,0:0.438,0.000:16:4,5,0:5,2,0:48:84,0,50,250,285,535:223,0,255:8,0:4.9553e+01,6.9893e-05,5.3000e+01,2.5029e+02,3.1979e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,5,2:5,4,3,4 chr1 155178783 . C . PASS END=155178796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 155178797 . G . PASS END=155178805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 155178806 . G . PASS END=155178819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 155178820 . C . PASS END=155178826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 155178827 . C . PASS END=155178828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155178829 . C . PASS END=155178832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 155178833 . T . PASS END=155178844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155178845 . C . PASS END=155178850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 155178851 . C . PASS END=155178851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 155178852 . C . PASS END=155178853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 155178854 . T . PASS END=155178854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155178855 . C . PASS END=155178866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 155178867 . G . PASS END=155178867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 155178868 . C . PASS END=155178878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 155178879 . C . PASS END=155178879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 155178880 . C . PASS END=155178888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 155178889 . A . PASS END=155178889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 155178890 . G . PASS END=155178895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr1 155178896 . A . PASS END=155178896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 155178897 . G . PASS END=155178897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 155178898 . T . PASS END=155178898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,344:0,22,255:12,0 chr1 155178899 . C . PASS END=155178908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 155178909 . G . PASS END=155178909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 155178910 . A . PASS END=155178910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr1 155178911 . A . PASS END=155178922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 155178923 . C . PASS END=155178923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 155178924 . C . PASS END=155178924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 155178925 . G . PASS END=155178927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 155178928 . G . PASS END=155178928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 155178929 . A . PASS END=155178929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 155178930 . T . LowGQ END=155178930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,243:9,0,252:9,0 chr1 155178931 . C . PASS END=155178931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 155178932 . T . LowGQ END=155178932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:9,0 chr1 155178933 . C . PASS END=155178935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 155178936 . C . PASS END=155178936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 155178937 . A . PASS END=155178949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 155178950 . G . LowGQ END=155178950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,227:23,0,249:9,0 chr1 155178951 . C . PASS END=155178952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 155178953 . A . PASS END=155178953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155178954 . C . PASS END=155178954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 155178955 . G . PASS END=155178961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155178962 . G . PASS END=155178962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:8,0 chr1 155178963 . G . PASS END=155178963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155178964 . G . PASS END=155178966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 155178967 . G . PASS END=155178967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 155178968 . G . PASS END=155178968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr1 155178969 . T . PASS END=155178969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 155178970 . G . PASS END=155178984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:12,0 chr1 155178985 . C . PASS END=155178985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 155178986 . A . PASS END=155178987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 155178988 . G . PASS END=155178988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 155178989 . C . PASS END=155178999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 155179000 . A . PASS END=155179000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 155179001 . G . PASS END=155179001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 155179002 . A . PASS END=155179002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 155179003 . A . PASS END=155179042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:12,0 chr1 155179043 . A . PASS END=155179043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 155179044 . T . PASS END=155179068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 155179069 . C . PASS END=155179107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:9,0 chr1 155179108 . C . PASS END=155179115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:4,0 chr1 155179116 . C . PASS END=155179118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,249:3,0 chr1 155179119 . T . PASS END=155179123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 155180137 . A . PASS END=155180152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr1 155180153 . C . PASS END=155180153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr1 155180154 . T . PASS END=155180165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 155180166 . G . PASS END=155180215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,878:0,62,255:26,0 chr1 155180216 . A . PASS END=155180218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 155180219 . C . PASS END=155180223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155180224 . G . PASS END=155180224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155180225 . G . PASS END=155180226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155180339 . G . PASS END=155180339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 155180340 . A . PASS END=155180341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 155180342 . C . PASS END=155180342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 155180343 . T . PASS END=155180351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,908:0,61,255:26,0 chr1 155180352 . C . PASS END=155180360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 155180361 . C . PASS END=155180361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 155180362 . A . PASS END=155180381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1147:0,80,255:31,0 chr1 155180382 . A . PASS END=155180382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:29,0 chr1 155180383 . G . PASS END=155180393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 155180394 . G . PASS END=155180394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 155180395 . A . PASS END=155180395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155180396 . T . PASS END=155180396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr1 155180397 . C . PASS END=155180397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155180398 . A . PASS END=155180418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr1 155181918 . A . PASS END=155181919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 155181920 . G . PASS END=155181921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 155181922 . A . PASS END=155181922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr1 155181923 . C . PASS END=155181937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:30,0 chr1 155181938 . T . PASS END=155181938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 155181939 . C . PASS END=155181991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:30:0,85,1096:0,85,255:34,0 chr1 155181992 . G . PASS END=155181992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 155181993 . A . PASS END=155182003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 155182004 . G . PASS END=155182010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:23,0 chr1 155182176 . G . PASS END=155182183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 155182184 . T . PASS END=155182184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 155182185 . T . PASS END=155182212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 155182213 . A . PASS END=155182215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155182216 . T . PASS END=155182216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155182217 . G . PASS END=155182217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155182218 . A . PASS END=155182271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 155182272 . G . PASS END=155182274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155182275 . C . PASS END=155182286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 155182287 . C . PASS END=155182292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 155182293 . A . PASS END=155182293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 155182294 . T . PASS END=155182299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 155182300 . G . PASS END=155182341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:18,0 chr1 155182342 . A . PASS END=155182342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:15,0 chr1 155182343 . A . PASS END=155182358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,676:0,54,255:19,0 chr1 155182485 . C . PASS END=155182497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,893:0,75,255:26,0 chr1 155182498 . C . PASS END=155182501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 155182502 . G . PASS END=155182520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,68,255:26,0 chr1 155182521 . T . PASS END=155182521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr1 155182522 . C . PASS END=155182547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,762:0,66,255:23,0 chr1 155182548 . T . PASS END=155182548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 155182549 . T . PASS END=155182551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,717:0,66,255:22,0 chr1 155182552 . T . PASS END=155182552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 155182553 . T . PASS END=155182556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 155182557 . G . PASS END=155182558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 155182559 . T . PASS END=155182559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155182560 . G . PASS END=155182560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 155182561 . C . PASS END=155182561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155183028 . C . LowGQ END=155183182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,1:2:0:1:0,0,0:0,0,11:2,0 chr1 155183275 . C . LowDepth;LowGQ END=155183489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 155204786 . T . PASS END=155204797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 155204798 . C . PASS END=155204803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 155204804 . G . PASS END=155204804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 155204805 . T . PASS END=155204806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 155204807 . G . PASS END=155204810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 155204811 . T . PASS END=155204814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155204815 . T . PASS END=155204815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 155204816 . G . PASS END=155204816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155204817 . G . PASS END=155204838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 155204839 . C . PASS END=155204847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,515:0,12,255:16,0 chr1 155204848 . C . PASS END=155204849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 155204850 . A . PASS END=155204855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,559:0,12,255:17,0 chr1 155204856 . G . PASS END=155204866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:18,0 chr1 155204867 . G . PASS END=155204878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr1 155204879 . A . PASS END=155204879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155204880 . T . PASS END=155204884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155204885 . A . PASS END=155204885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 155204886 . G . PASS END=155204889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 155204890 . A . PASS END=155204890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 155204891 . G . PASS END=155204892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155204898 . A . PASS END=155204898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 155204900 . C . PASS END=155204900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:21,0 chr1 155204976 . T . PASS END=155204976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1349:0,95,255:34,0 chr1 155204986 . C . PASS END=155205002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:38:0,90,1421:0,90,255:40,0 chr1 155205003 . A . PASS END=155205003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1366:0,68,255:39,0 chr1 155205004 . A . PASS END=155205102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:98:41:0,98,1466:0,98,255:40,0 chr1 155205115 . A . PASS END=155205115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 155205134 . C . PASS END=155205134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 155205470 . A . PASS END=155205470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 155205472 . C . PASS END=155205494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,848:0,69,255:26,0 chr1 155205495 . C . PASS END=155205503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 155205504 . T . PASS END=155205504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,858:0,67,255:27,0 chr1 155205505 . T . PASS END=155205515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr1 155205516 . G . PASS END=155205516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 155205517 . T . PASS END=155205544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1033:0,84,255:31,0 chr1 155205545 . T . PASS END=155205545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 155205546 . G . PASS END=155205556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 155205557 . T . PASS END=155205557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 155205558 . A . PASS END=155205578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1164:0,90,255:31,0 chr1 155205579 . T . PASS END=155205579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 155205580 . T . PASS END=155205607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1101:0,90,255:30,0 chr1 155205608 . T . PASS END=155205610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 155205611 . A . PASS END=155205611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:23,0 chr1 155205612 . G . PASS END=155205619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr1 155205620 . C . PASS END=155205621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 155205622 . T . PASS END=155205631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr1 155205632 . G . PASS END=155205635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 155206036 . C . PASS END=155206047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 155206048 . G . PASS END=155206212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,986:0,80,255:40,0 chr1 155206213 . T . PASS END=155206243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,915:0,72,255:25,0 chr1 155206244 . T . PASS END=155206244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:21,0 chr1 155206245 . C . PASS END=155206249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155206250 . T . PASS END=155206260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 155207132 . C . PASS END=155207348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,84,255:40,0 chr1 155207349 . T . PASS END=155207370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:25,0 chr1 155207925 . T . PASS END=155208097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,99,1473:0,99,255:40,0 chr1 155208308 . C . PASS END=155208309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,915:0,62,255:25,0 chr1 155208310 . T . PASS END=155208310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 155208311 . G . PASS END=155208316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 155208317 . G . PASS END=155208317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr1 155208318 . G . PASS END=155208320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 155208321 . T . PASS END=155208321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:23,0 chr1 155208322 . C . PASS END=155208333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 155208334 . G . PASS END=155208334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr1 155208335 . G . PASS END=155208335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 155208336 . C . PASS END=155208340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 155208341 . G . PASS END=155208341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 155208342 . T . PASS END=155208344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 155208345 . T . PASS END=155208345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 155208346 . G . PASS END=155208361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1072:0,80,255:35,0 chr1 155208362 . A . PASS END=155208362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1152:0,66,255:33,0 chr1 155208363 . G . PASS END=155208415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1337:0,84,255:40,0 chr1 155208416 . T . PASS END=155208416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1271:0,34,255:31,0 chr1 155208417 . A . PASS END=155208441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1109:0,80,255:33,0 chr1 155209407 . C . PASS END=155209553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,107,1459:0,107,255:40,0 chr1 155209677 . C . PASS END=155209678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 155209679 . G . PASS END=155209685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 155209686 . T . PASS END=155209686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 155209687 . G . PASS END=155209820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1025:0,83,255:35,0 chr1 155209821 . A . PASS END=155209840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:23,0 chr1 155209841 . A . PASS END=155209852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 155209853 . A . PASS END=155209857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 155209858 . G . PASS END=155209868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 155210420 . C . PASS END=155210508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1266:0,87,255:40,0 chr1 155210877 . C . PASS END=155210903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,125,255:40,0 chr1 155211106 . T . PASS END=155211106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155217187 . T . PASS END=155217193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:25,0 chr1 155217194 . C . PASS END=155217196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 155217197 . A . PASS END=155217200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr1 155217201 . C . PASS END=155217205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:31,0 chr1 155217206 . G . PASS END=155217206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 155217207 . C . PASS END=155217241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1170:0,93,255:36,0 chr1 155217242 . C . PASS END=155217242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 155217243 . C . PASS END=155217304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1135:0,85,255:37,0 chr1 155217305 . A . PASS END=155217305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 155217306 . G . PASS END=155217306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155217307 . A . PASS END=155217307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:26,0 chr1 155217308 . A . PASS END=155217312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr1 155217313 . T . PASS END=155217320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 155217573 . T . PASS END=155217627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr1 155217628 . C . PASS END=155217631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 155217632 . G . PASS END=155217642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 155217643 . C . PASS END=155217659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,488:0,39,255:13,0 chr1 155217660 . C . PASS END=155217660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155217661 . C . PASS END=155217664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155217665 . G . PASS END=155217741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,48,255:19,0 chr1 155217742 . G . PASS END=155217746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 155217841 . C . PASS END=155217846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 155217847 . A . PASS END=155217848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 155217849 . G . PASS END=155217872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 155217873 . G . PASS END=155217914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 155217915 . G . PASS END=155217930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 155217931 . G . PASS END=155217931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 155217932 . C . PASS END=155217933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 155217934 . G . PASS END=155217934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155217935 . C . PASS END=155217937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 155217938 . T . PASS END=155217938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,512:0,21,255:14,0 chr1 155217939 . T . PASS END=155217940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 155217941 . A . PASS END=155217942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 155217943 . G . PASS END=155217944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,543:0,31,255:14,0 chr1 155217945 . C . PASS END=155217963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,623:0,41,255:19,0 chr1 155217964 . T . PASS END=155217965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155217966 . C . PASS END=155217967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155217968 . G . PASS END=155218001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:24,0 chr1 155218002 . G . PASS END=155218002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 155218003 . C . PASS END=155218038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:24,0 chr1 155218039 . C . PASS END=155218039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 155218040 . A . PASS END=155218085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,856:0,69,255:25,0 chr1 155218086 . A . PASS END=155218094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:15,0 chr1 155218196 . C . PASS END=155218247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1189:0,88,255:37,0 chr1 155218248 . A . PASS END=155218248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1072:0,41,255:31,0 chr1 155218249 . A . PASS END=155218253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:32,0 chr1 155218254 . C . PASS END=155218254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:27,0 chr1 155218255 . C . PASS END=155218264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1241:0,86,255:32,0 chr1 155220067 . C . PASS END=155220072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 155220073 . C . PASS END=155220098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 155220099 . C . PASS END=155220109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 155220110 . T . PASS END=155220153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 155220154 . G . PASS END=155220154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 155220155 . C . PASS END=155220159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 155220160 . G . PASS END=155220160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 155220161 . T . PASS END=155220170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 155220171 . G . LowGQ END=155220171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:10,0 chr1 155220172 . A . PASS END=155220172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155220173 . A . PASS END=155220173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:12,0 chr1 155220174 . C . PASS END=155220174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155220175 . C . PASS END=155220178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 155220179 . G . PASS END=155220179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155220180 . C . PASS END=155220180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:11,0 chr1 155220181 . T . PASS END=155220181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155220182 . A . PASS END=155220183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 155220184 . C . LowGQ END=155220184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 155220185 . G . PASS END=155220185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155220186 . C . PASS END=155220186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 155220187 . T . LowGQ END=155220188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,355:0,0,255:11,0 chr1 155220189 . A . PASS END=155220189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155220190 . A . PASS END=155220190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 155220191 . G . PASS END=155220193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 155220194 . A . PASS END=155220197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 155220198 . G . PASS END=155220201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155220202 . G . PASS END=155220205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155220206 . T . PASS END=155220221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 155220222 . G . PASS END=155220222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 155220223 . C . PASS END=155220231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 155220232 . G . PASS END=155220232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:13,0 chr1 155220233 . G . PASS END=155220235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 155220236 . C . PASS END=155220249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 155220250 . C . PASS END=155220274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:17,0 chr1 155220275 . G . PASS END=155220290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:13:0,39,451:0,39,255:13,0 chr1 155220291 . G . PASS END=155220294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 155220295 . A . PASS END=155220309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 155220310 . G . PASS END=155220310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 155220311 . G . PASS END=155220335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr1 155220336 . C . PASS END=155220336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 155220337 . C . PASS END=155220339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 155220340 . G . PASS END=155220340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 155220341 . T . PASS END=155220368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,403:0,36,255:12,0 chr1 155220369 . G . PASS END=155220387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 155220388 . G . PASS END=155220388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 155220389 . T . PASS END=155220396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 155220397 . G . PASS END=155220397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 155220398 . C . PASS END=155220429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:19,0 chr1 155220430 . G . PASS END=155220430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 155220431 . C . PASS END=155220439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 155220440 . G . PASS END=155220447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 155220448 . T . PASS END=155220448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 155220449 . G . PASS END=155220462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr1 155220463 . C . PASS END=155220463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 155220464 . A . PASS END=155220473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 155220474 . T . PASS END=155220475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:20,0 chr1 155220476 . G . PASS END=155220477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155220478 . T . PASS END=155220484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155220485 . A . PASS END=155220485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:19,0 chr1 155220486 . A . PASS END=155220491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,546:0,40,255:19,0 chr1 155220492 . A . PASS END=155220492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 155220493 . C . PASS END=155220517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 155220518 . C . PASS END=155220526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 155220527 . C . PASS END=155220527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155220528 . A . PASS END=155220529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155220530 . C . PASS END=155220531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 155220532 . G . PASS END=155220546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 155220547 . A . PASS END=155220583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 155220584 . C . PASS END=155220586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155220587 . C . PASS END=155220598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:15,0 chr1 155220599 . G . PASS END=155220599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 155220600 . C . PASS END=155220611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 155220612 . A . PASS END=155220612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155220886 . C . PASS END=155220894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 155220895 . T . LowGQ END=155220895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,286:0,0,255:9,0 chr1 155220896 . G . PASS END=155220905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr1 155220906 . C . PASS END=155220915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155220916 . T . PASS END=155220916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 155220917 . G . PASS END=155220917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155220918 . C . PASS END=155220920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 155220921 . G . PASS END=155220921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 155220922 . A . PASS END=155220922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 155220923 . G . PASS END=155220923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 155220924 . C . PASS END=155220924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 155220925 . C . PASS END=155220925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 155220926 . A . PASS END=155220928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 155220929 . G . PASS END=155220931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 155220932 . A . PASS END=155220933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 155220934 . G . PASS END=155220937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 155220938 . A . PASS END=155220938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 155220939 . G . PASS END=155220944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 155220945 . A . PASS END=155220946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 155220947 . G . PASS END=155220954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 155220955 . C . LowGQ END=155220955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr1 155221293 . C . PASS END=155221391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1208:0,84,255:40,0 chr1 155221392 . G . PASS END=155221392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr1 155221524 . C . PASS END=155221524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155221525 . T . PASS END=155221526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 155221527 . T . PASS END=155221527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:20,0 chr1 155221528 . G . PASS END=155221528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 155221529 . T . PASS END=155221529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155221530 . G . PASS END=155221530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 155221531 . C . PASS END=155221533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155221534 . C . PASS END=155221534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,698:0,19,255:19,0 chr1 155221535 . T . PASS END=155221537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155221538 . T . PASS END=155221538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 155221539 . T . PASS END=155221539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:19,0 chr1 155221540 . C . PASS END=155221540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 155221541 . T . PASS END=155221541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 155221542 . G . PASS END=155221542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,646:0,24,255:20,0 chr1 155221543 . A . PASS END=155221544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,703:0,66,255:22,0 chr1 155221545 . C . PASS END=155221548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 155221549 . A . PASS END=155221549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:17,0 chr1 155221550 . G . PASS END=155221550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 155221551 . G . PASS END=155221551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,778:0,28,255:20,0 chr1 155221552 . T . PASS END=155221552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 155221553 . A . PASS END=155221554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:21,0 chr1 155221555 . A . PASS END=155221555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 155221556 . C . PASS END=155221556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 155221557 . T . PASS END=155221557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155221558 . C . PASS END=155221558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 155221559 . T . PASS END=155221563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:68:23:0,68,697:0,68,255:23,0 chr1 155221564 . G . PASS END=155221564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 155221565 . A . PASS END=155221565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 155221566 . T . PASS END=155221566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 155221567 . A . PASS END=155221567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,725:0,38,255:22,0 chr1 155221568 . G . PASS END=155221569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:23,0 chr1 155221570 . A . PASS END=155221570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,662:0,36,255:21,0 chr1 155221571 . G . PASS END=155221573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 155221574 . C . PASS END=155221574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 155221575 . G . PASS END=155221584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 155221585 . C . PASS END=155221585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 155221586 . A . PASS END=155221586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:21,0 chr1 155221587 . G . PASS END=155221588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155221589 . C . PASS END=155221589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 155221590 . G . PASS END=155221591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 155221592 . G . PASS END=155221592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 155221593 . A . PASS END=155221597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,764:0,69,255:23,0 chr1 155221598 . T . PASS END=155221599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr1 155221600 . C . PASS END=155221601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 155221602 . T . PASS END=155221602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 155221603 . C . PASS END=155221607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 155221608 . T . PASS END=155221608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:20,0 chr1 155221609 . C . PASS END=155221614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 155221615 . T . PASS END=155221627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,568:0,47,255:17,0 chr1 155221628 . A . PASS END=155221628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,515:0,20,255:15,0 chr1 155221629 . G . PASS END=155221649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 155221650 . C . PASS END=155221659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 155221660 . G . PASS END=155221661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:22:13:0,22,426:0,22,255:12,0 chr1 155221662 . C . PASS END=155221667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 155221668 . G . PASS END=155221671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 155221672 . C . PASS END=155221681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:10,0 chr1 155221682 . C . PASS END=155221699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 155223416 . C . PASS END=155223523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:50:0,120,1800:0,130,255:40,0 chr1 155223650 . C . PASS END=155223658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:18,0 chr1 155223659 . C . PASS END=155223711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,790:0,63,255:25,0 chr1 155223712 . A . PASS END=155223741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1177:0,80,255:31,0 chr1 155223742 . A . PASS END=155223743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 155223744 . G . PASS END=155223744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155223745 . G . PASS END=155223769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,901:0,65,255:26,0 chr1 155223875 . C . PASS END=155223967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1096:0,81,255:40,0 chr1 155223968 . C . PASS END=155223968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1259:0,77,255:31,0 chr1 155223969 . A . PASS END=155223974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1296:0,89,255:34,0 chr1 155223975 . A . PASS END=155223975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1092:0,30,255:31,0 chr1 155223976 . A . PASS END=155223985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1103:0,85,255:34,0 chr1 155224191 . C . PASS END=155224247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,149,255:40,0 chr1 155224444 . C . PASS END=155224453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,931:0,78,255:26,0 chr1 155224454 . G . PASS END=155224467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1155:0,80,255:31,0 chr1 155224468 . G . PASS END=155224468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 155224469 . G . PASS END=155224502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:32:0,82,1125:0,82,255:34,0 chr1 155224503 . A . PASS END=155224503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1201:0,64,255:33,0 chr1 155224504 . G . PASS END=155224556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:34,0 chr1 155224557 . C . PASS END=155224627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 155224628 . C . PASS END=155224653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,690:0,54,255:19,0 chr1 155224654 . A . PASS END=155224654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 155224655 . G . PASS END=155224660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 155224661 . G . PASS END=155224661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 155224662 . G . PASS END=155224668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 155226064 . T . PASS END=155226130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:18,0 chr1 155226131 . G . PASS END=155226132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155226133 . G . PASS END=155226141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 155226142 . G . PASS END=155226167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155226168 . C . PASS END=155226201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,675:0,44,255:19,0 chr1 155226202 . G . PASS END=155226203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 155226204 . A . PASS END=155226210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155226465 . C . PASS END=155226485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 155226486 . T . PASS END=155226486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 155226487 . A . PASS END=155226547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,808:0,62,255:26,0 chr1 155226548 . T . PASS END=155226573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 155226574 . A . PASS END=155226574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 155226575 . T . PASS END=155226582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 155227076 . C . PASS END=155227177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,3:95:99:61:0,120,1800:0,120,255:40,1 chr1 155227289 . C . PASS END=155227448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,99,1483:0,110,255:40,0 chr1 155228617 . A . PASS END=155228617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 155228618 . C . PASS END=155228618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155228619 . A . PASS END=155228619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 155228620 . T . PASS END=155228687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1250:0,87,255:40,2 chr1 155228688 . A . PASS END=155228688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1459:0,60,255:40,2 chr1 155228689 . A . PASS END=155228726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:32:0,91,1258:0,91,255:40,0 chr1 155228727 . G . PASS END=155228727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr1 155228728 . G . PASS END=155228735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1060:0,93,255:31,0 chr1 155228736 . T . PASS END=155228736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1007:0,46,255:25,0 chr1 155228737 . T . PASS END=155228743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,900:0,76,255:22,0 chr1 155228744 . A . PASS END=155228745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 155230121 . T . PASS END=155230217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1137:0,80,255:40,0 chr1 155230218 . A . PASS END=155230218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 155230219 . G . PASS END=155230227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:27,0 chr1 155230228 . G . PASS END=155230228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155230229 . C . PASS END=155230229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155230230 . T . PASS END=155230231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155230232 . C . PASS END=155230236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 155230237 . G . PASS END=155230237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 155230238 . A . PASS END=155230239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 155230240 . G . PASS END=155230241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,993:0,51,255:27,0 chr1 155230328 . C . PASS END=155230329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155230330 . G . PASS END=155230336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 155230337 . G . PASS END=155230368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:23,0 chr1 155230369 . T . PASS END=155230369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 155230370 . G . PASS END=155230384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:25,0 chr1 155230385 . C . PASS END=155230385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 155230386 . T . PASS END=155230398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 155230399 . C . PASS END=155230399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 155230400 . T . PASS END=155230408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,876:0,69,255:24,0 chr1 155230409 . A . PASS END=155230409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 155230410 . G . PASS END=155230422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 155230423 . G . PASS END=155230447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 155230448 . T . PASS END=155230448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 155230449 . G . PASS END=155230450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 155231448 . C . PASS END=155231449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 155231450 . C . PASS END=155231450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 155231451 . C . PASS END=155231455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 155231456 . T . PASS END=155231456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,871:0,27,255:29,0 chr1 155231457 . C . PASS END=155231519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1061:0,88,255:40,0 chr1 155231520 . T . PASS END=155231524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,86,255:26,0 chr1 155231525 . C . PASS END=155231525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155231877 . C . PASS END=155231877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155231878 . T . PASS END=155231878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:19,0 chr1 155231879 . G . PASS END=155231887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,833:0,61,255:24,0 chr1 155231888 . T . PASS END=155231888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:24,0 chr1 155231889 . G . PASS END=155231916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:26,0 chr1 155231917 . T . PASS END=155231917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,886:0,50,255:26,0 chr1 155231918 . T . PASS END=155231942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:22:0,65,776:0,65,255:26,0 chr1 155233009 . T . PASS END=155233010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 155233011 . A . PASS END=155233034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:26,0 chr1 155233035 . C . PASS END=155233044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1005:0,81,255:29,0 chr1 155233045 . G . PASS END=155233045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 155233046 . T . PASS END=155233120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1064:0,86,255:34,0 chr1 155233121 . T . PASS END=155233122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 155233123 . A . PASS END=155233124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:27,0 chr1 155233125 . A . PASS END=155233125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 155233126 . C . PASS END=155233133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:28,0 chr1 155233134 . T . PASS END=155233137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:30:0,65,1094:0,65,255:27,0 chr1 155233138 . T . PASS END=155233143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:28,0 chr1 155233144 . C . PASS END=155233144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr1 155233145 . A . PASS END=155233150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 155233151 . A . PASS END=155233181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,68,255:26,0 chr1 155233182 . T . PASS END=155233191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 155233741 . C . PASS END=155233831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1104:0,88,255:39,0 chr1 155234012 . C . PASS END=155234012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 155234013 . T . PASS END=155234074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:32,0 chr1 155234075 . T . PASS END=155234075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 155234076 . C . PASS END=155234091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 155234259 . C . PASS END=155234298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1219:0,81,255:38,0 chr1 155234299 . C . PASS END=155234300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1280:0,67,255:33,0 chr1 155234301 . G . PASS END=155234341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1466:0,110,255:40,0 chr1 155234436 . C . PASS END=155234565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:42:0,102,1530:0,120,255:40,0 chr1 155235651 . C . PASS END=155235745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1228:0,89,255:40,0 chr1 155236520 . A . PASS END=155236684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:84:40:0,84,1260:0,103,255:40,0 chr1 155236685 . G . PASS END=155236686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,88,255:26,0 chr1 155237801 . T . PASS END=155237917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,108,1620:0,151,255:40,0 chr1 155238084 . C . PASS END=155238121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,104,1711:0,104,255:40,0 chr1 155238122 . C . PASS END=155238122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1714:0,78,255:40,0 chr1 155238123 . C . PASS END=155238150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,108,1673:0,108,255:40,0 chr1 155238499 . A . PASS END=155238499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 155238500 . T . PASS END=155238500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 155238501 . C . PASS END=155238504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155238505 . C . PASS END=155238505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:25,0 chr1 155238506 . T . PASS END=155238509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155238510 . A . PASS END=155238510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 155238511 . G . PASS END=155238512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 155238513 . C . PASS END=155238513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 155238514 . A . PASS END=155238514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1045:0,84,255:28,0 chr1 155238515 . G . PASS END=155238515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 155238516 . T . PASS END=155238516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 155238517 . C . PASS END=155238517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 155238518 . C . PASS END=155238519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 155238520 . C . PASS END=155238521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1024:0,60,255:30,0 chr1 155238522 . A . PASS END=155238522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1031:0,38,255:29,0 chr1 155238523 . C . PASS END=155238523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 155238524 . G . PASS END=155238524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,998:0,43,255:28,0 chr1 155238525 . T . PASS END=155238526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 155238527 . G . PASS END=155238527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:29,0 chr1 155238528 . T . PASS END=155238528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 155238529 . A . PASS END=155238529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 155238530 . G . PASS END=155238531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1072:0,63,255:30,0 chr1 155238532 . T . PASS END=155238532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 155238533 . G . PASS END=155238533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:29,0 chr1 155238534 . A . PASS END=155238534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1015:0,27,255:28,0 chr1 155238535 . G . PASS END=155238542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1119:0,82,255:31,0 chr1 155238543 . T . PASS END=155238546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:32:0,78,1170:0,83,255:26,0 chr1 155238547 . C . PASS END=155238547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:24,0 chr1 155238548 . G . PASS END=155238549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 155238550 . C . PASS END=155238550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:23,0 chr1 155238551 . G . PASS END=155238551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 155238552 . T . PASS END=155238552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,956:0,56,255:24,0 chr1 155238553 . C . PASS END=155238557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 155238558 . A . PASS END=155238562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:26:0,60,900:0,61,255:25,0 chr1 155238563 . C . PASS END=155238563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:19,0 chr1 155238564 . T . PASS END=155238569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,833:0,61,255:21,0 chr1 155238570 . C . PASS END=155238570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 155238571 . T . PASS END=155238571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:19,0 chr1 155238572 . C . PASS END=155238572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 155238573 . C . PASS END=155238573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,676:0,36,255:19,0 chr1 155238574 . G . PASS END=155238584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,52,255:18,0 chr1 155238585 . T . PASS END=155238585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:13,0 chr1 155238586 . G . PASS END=155238586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:15,0 chr1 155239279 . C . PASS END=155239283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 155239284 . A . PASS END=155239285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 155239286 . G . PASS END=155239293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:30,0 chr1 155239294 . A . PASS END=155239294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 155239295 . A . PASS END=155239295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 155239296 . A . PASS END=155239296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:31,0 chr1 155239297 . T . PASS END=155239485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:27:0,80,1031:0,80,255:40,0 chr1 155239486 . G . PASS END=155239507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr1 155240599 . C . PASS END=155240617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:15,0 chr1 155240618 . A . PASS END=155240618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 155240619 . G . PASS END=155240626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,553:0,45,255:16,0 chr1 155240627 . C . PASS END=155240627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 155240628 . T . PASS END=155240645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:19,0 chr1 155240646 . C . PASS END=155240646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,543:0,10,255:15,0 chr1 155240647 . C . PASS END=155240651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 155240652 . A . PASS END=155240652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155240653 . C . PASS END=155240653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr1 155240654 . T . PASS END=155240657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 155240658 . A . PASS END=155240658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 155240659 . C . PASS END=155240662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 155240663 . A . PASS END=155240663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 155240664 . C . PASS END=155240671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 155240672 . G . PASS END=155240672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 155240673 . A . PASS END=155240675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 155240676 . T . PASS END=155240678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,760:0,52,255:22,0 chr1 155240679 . T . PASS END=155240681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 155240682 . T . PASS END=155240683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 155240684 . G . PASS END=155240684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 155240685 . C . PASS END=155240685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:24,0 chr1 155240686 . T . PASS END=155240689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155240690 . G . PASS END=155240690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:25,0 chr1 155240691 . C . PASS END=155240694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 155240695 . C . PASS END=155240695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,903:0,45,255:25,0 chr1 155240696 . G . PASS END=155240703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 155240704 . T . PASS END=155240704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:23,0 chr1 155240705 . A . PASS END=155240705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:25,0 chr1 155240706 . G . PASS END=155240706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155240707 . T . PASS END=155240709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 155240710 . T . PASS END=155240710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,921:0,51,255:24,0 chr1 155240711 . C . PASS END=155240714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155240715 . G . PASS END=155240715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155240716 . T . PASS END=155240716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,853:0,12,255:24,0 chr1 155240717 . A . PASS END=155240720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,939:0,64,255:25,0 chr1 155240721 . C . PASS END=155240721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr1 155240722 . C . PASS END=155240728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:24,0 chr1 155240729 . T . PASS END=155240729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 155240730 . G . PASS END=155240732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:24,0 chr1 155240733 . T . PASS END=155240733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 155240734 . C . PASS END=155240738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 155240739 . T . PASS END=155240739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 155240740 . G . PASS END=155240741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155240742 . G . PASS END=155240742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 155240743 . G . PASS END=155240745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155240746 . T . PASS END=155240767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:18:0,47,637:0,47,255:20,0 chr1 155240768 . T . PASS END=155240768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:15,0 chr1 155247382 . A . PASS END=155247415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,139:0,12,139:6,0 chr1 155247416 . G . PASS END=155247454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 155247455 . T . PASS END=155247455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 155247456 . T . PASS END=155247466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155247467 . C . PASS END=155247467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 155247468 . T . PASS END=155247479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 155247480 . C . PASS END=155247553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,366:0,30,255:13,0 chr1 155247554 . A . PASS END=155247554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr1 155247555 . C . PASS END=155247571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 155247572 . T . PASS END=155247572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 155247573 . G . PASS END=155247616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 155247617 . A . PASS END=155247639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 155247640 . C . PASS END=155247643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:5,0 chr1 155247644 . C . PASS END=155247644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:3,0 chr1 155247645 . C . PASS END=155247651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:4,0 chr1 155247652 . G . LowGQ END=155247659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,135:0,0,140:3,0 chr1 155249070 . A . PASS END=155249161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1039:0,84,255:40,0 chr1 155249162 . C . PASS END=155249162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:30,0 chr1 155249163 . T . PASS END=155249172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:30,0 chr1 155249173 . T . PASS END=155249203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 155249204 . A . PASS END=155249206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 155252202 . G . PASS END=155252380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1142:0,84,255:40,0 chr1 155252381 . A . PASS END=155252381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1274:0,67,255:34,0 chr1 155252382 . G . PASS END=155252415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1288:0,92,255:36,0 chr1 155252416 . C . PASS END=155252416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:30,0 chr1 155252417 . G . PASS END=155252439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1205:0,88,255:34,0 chr1 155252440 . T . PASS END=155252440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1099:0,74,255:33,0 chr1 155252441 . T . PASS END=155252479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:33:0,91,1250:0,91,255:36,0 chr1 155252480 . T . PASS END=155252480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr1 155252481 . C . PASS END=155252547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:35:0,83,1241:0,83,255:38,0 chr1 155252548 . A . PASS END=155252548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:31,0 chr1 155252549 . T . PASS END=155252559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1174:0,85,255:33,0 chr1 155252560 . A . PASS END=155252560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:31,0 chr1 155252561 . C . PASS END=155252562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 155252563 . A . PASS END=155252563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr1 155252564 . A . PASS END=155252602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr1 155252603 . T . PASS END=155252617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,65,255:25,0 chr1 155252618 . A . PASS END=155252626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:19:0,43,577:0,43,255:19,0 chr1 155252627 . A . PASS END=155252627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,596:0,27,255:17,0 chr1 155252628 . G . PASS END=155252631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 155253765 . A . PASS END=155253767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,951:0,87,255:29,0 chr1 155253768 . T . PASS END=155253768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 155253769 . T . PASS END=155253888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:29:0,81,1215:0,87,255:40,0 chr1 155253889 . T . PASS END=155253899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:28:0,75,1125:0,82,255:26,0 chr1 155253900 . T . PASS END=155253906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 155253907 . T . PASS END=155253922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 155253923 . G . PASS END=155253926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:22:0,57,855:0,66,255:19,0 chr1 155254330 . A . PASS END=155254343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 155254344 . C . PASS END=155254344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 155254345 . C . PASS END=155254358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,584:0,51,255:18,0 chr1 155254359 . T . PASS END=155254359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 155254360 . G . PASS END=155254370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,662:0,54,255:19,0 chr1 155254371 . G . PASS END=155254372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155254373 . C . PASS END=155254379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr1 155254380 . C . PASS END=155254381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155254382 . A . PASS END=155254396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,690:0,57,255:19,0 chr1 155254397 . G . PASS END=155254407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 155254408 . C . PASS END=155254411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155254412 . C . PASS END=155254416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155254417 . G . PASS END=155254437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 155254438 . C . PASS END=155254438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:17,0 chr1 155254439 . T . PASS END=155254447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 155254448 . T . PASS END=155254448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 155254449 . C . PASS END=155254450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 155254451 . G . PASS END=155254474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 155254475 . A . PASS END=155254476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155254477 . G . PASS END=155254548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,607:0,45,255:19,0 chr1 155254956 . T . PASS END=155254956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 155254957 . A . PASS END=155254957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 155254958 . C . PASS END=155254958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155254959 . A . PASS END=155254959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 155254960 . A . PASS END=155254967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155254968 . G . PASS END=155254969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,853:0,56,255:23,0 chr1 155254970 . G . PASS END=155254972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,850:0,72,255:25,0 chr1 155254973 . G . PASS END=155254973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:28,0 chr1 155254974 . T . PASS END=155254974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 155254975 . A . PASS END=155254975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:29,0 chr1 155254976 . C . PASS END=155254976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1085:0,90,255:30,0 chr1 155254977 . A . PASS END=155254977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:28,0 chr1 155254978 . T . PASS END=155254978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 155254979 . G . PASS END=155254979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 155254980 . T . PASS END=155254981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1162:0,96,255:32,0 chr1 155254982 . C . PASS END=155254982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1044:0,65,255:31,0 chr1 155254983 . T . PASS END=155254983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 155254984 . T . PASS END=155254984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 155254985 . C . PASS END=155254991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:32,0 chr1 155254992 . C . PASS END=155254992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:8:32:0,8,953:0,8,255:27,0 chr1 155254993 . T . PASS END=155255000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:31,0 chr1 155255001 . G . PASS END=155255001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1086:0,49,255:29,0 chr1 155255002 . A . PASS END=155255003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 155255004 . A . PASS END=155255004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 155255005 . C . PASS END=155255008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:33:0,88,1107:0,88,255:33,0 chr1 155255009 . G . PASS END=155255009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:32,0 chr1 155255010 . C . PASS END=155255021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1091:0,85,255:33,0 chr1 155255022 . G . PASS END=155255022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1031:0,52,255:27,0 chr1 155255023 . A . PASS END=155255023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1158:0,85,255:29,0 chr1 155255024 . G . PASS END=155255024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:19:35:0,19,1021:0,19,255:27,0 chr1 155255025 . T . PASS END=155255025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1103:0,72,255:29,0 chr1 155255026 . A . PASS END=155255026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:30,0 chr1 155255027 . C . PASS END=155255027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:38:35:0,38,972:0,38,255:27,0 chr1 155255028 . T . PASS END=155255028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 155255029 . A . PASS END=155255029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1059:0,39,255:26,0 chr1 155255030 . T . PASS END=155255030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,101,255:31,0 chr1 155255031 . G . PASS END=155255031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1103:0,72,255:29,0 chr1 155255032 . A . PASS END=155255032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 155255033 . G . LowGQ END=155255033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,7:35:0:35:0,0,770:62,0,255:24,0 chr1 155255034 . C . PASS END=155255037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 155255038 . G . PASS END=155255038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1031:0,30,255:28,0 chr1 155255039 . C . PASS END=155255039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1039:0,52,255:28,0 chr1 155255040 . T . PASS END=155255040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,951:0,65,255:29,0 chr1 155255041 . A . PASS END=155255047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1022:0,82,255:32,0 chr1 155255048 . C . LowGQ END=155255048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:33:0,0,756:7,0,255:28,0 chr1 155255049 . A . PASS END=155255049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:33,0 chr1 155255050 . A . PASS END=155255050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:19:33:0,19,953:0,19,255:27,0 chr1 155255051 . G . LowGQ END=155255052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,717:17,0,255:25,0 chr1 155255053 . T . PASS END=155255053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1117:0,82,255:30,0 chr1 155255054 . G . PASS END=155255054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,975:0,65,255:29,0 chr1 155255055 . T . PASS END=155255056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1036:0,82,255:31,0 chr1 155255057 . C . PASS END=155255057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:29,0 chr1 155255058 . G . PASS END=155255058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:1:33:0,1,779:0,1,255:26,0 chr1 155255059 . A . PASS END=155255059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,894:0,32,255:27,0 chr1 155255060 . T . PASS END=155255060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1111:0,82,255:30,0 chr1 155255061 . G . PASS END=155255061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,826:0,21,255:28,0 chr1 155255062 . A . PASS END=155255063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,922:0,62,255:30,0 chr1 155255064 . G . LowGQ END=155255064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,7:31:0:31:0,0,599:24,0,255:24,0 chr1 155255065 . A . PASS END=155255065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 155255066 . A . PASS END=155255067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr1 155255068 . G . PASS END=155255068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,867:0,59,255:28,0 chr1 155255069 . C . PASS END=155255071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:60:31:0,60,810:0,60,255:29,0 chr1 155255072 . C . PASS END=155255072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 155255073 . C . LowGQ END=155255073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,7:32:0:32:0,0,698:35,0,255:23,0 chr1 155255074 . T . PASS END=155255074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:29:32:0,29,824:0,29,255:26,0 chr1 155255075 . G . PASS END=155255077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 155255078 . C . PASS END=155255078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,960:0,76,255:28,0 chr1 155255079 . G . PASS END=155255079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,853:0,59,255:27,0 chr1 155255080 . A . PASS END=155255080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,928:0,76,255:29,0 chr1 155255081 . G . PASS END=155255081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155255082 . C . PASS END=155255082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,797:0,43,255:24,0 chr1 155255083 . T . PASS END=155255083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:26,0 chr1 155255084 . G . PASS END=155255084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,92,255:27,0 chr1 155255085 . A . PASS END=155255085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,792:0,59,255:25,0 chr1 155255086 . G . PASS END=155255088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr1 155255089 . A . PASS END=155255089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,781:0,53,255:24,0 chr1 155255090 . G . PASS END=155255102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,859:0,65,255:26,0 chr1 155255515 . G . PASS END=155255533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 155255534 . G . PASS END=155255534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 155255535 . T . PASS END=155255562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:19,0 chr1 155255563 . T . PASS END=155255563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:17,0 chr1 155255564 . T . PASS END=155255567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 155255568 . C . PASS END=155255568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 155255569 . C . PASS END=155255569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155255570 . A . PASS END=155255581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 155255582 . G . PASS END=155255582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 155255583 . C . PASS END=155255597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,837:0,69,255:25,0 chr1 155255598 . T . PASS END=155255598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,648:0,28,255:21,0 chr1 155255599 . C . PASS END=155255599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 155255600 . T . PASS END=155255600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,799:0,45,255:22,0 chr1 155255601 . C . PASS END=155255620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,893:0,75,255:25,0 chr1 155255621 . T . PASS END=155255621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:22,0 chr1 155255622 . C . PASS END=155255648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 155255649 . T . PASS END=155255698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,706:0,57,255:19,0 chr1 155255699 . G . PASS END=155255742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,404:0,33,255:13,0 chr1 155255743 . T . PASS END=155255755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 155256964 . A . PASS END=155256975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,390:0,33,255:12,0 chr1 155256976 . T . PASS END=155256976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 155256977 . A . PASS END=155256977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 155256978 . A . PASS END=155256978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr1 155256979 . C . PASS END=155256995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 155256996 . G . PASS END=155256997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 155256998 . C . PASS END=155256999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155257000 . G . PASS END=155257000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155257001 . T . PASS END=155257001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 155257002 . G . PASS END=155257004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155257005 . C . PASS END=155257005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 155257006 . G . PASS END=155257037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,604:0,48,255:19,0 chr1 155257038 . A . PASS END=155257038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr1 155257039 . G . PASS END=155257053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:18,0 chr1 155257054 . A . PASS END=155257054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 155257055 . T . PASS END=155257067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 155257068 . G . PASS END=155257068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155257069 . A . PASS END=155257069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 155257070 . G . PASS END=155257079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 155257080 . A . PASS END=155257082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 155257083 . C . PASS END=155257103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 155257104 . G . PASS END=155257104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 155257105 . C . PASS END=155257120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:10,0 chr1 155257121 . C . PASS END=155257121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 155257122 . C . PASS END=155257125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 155257126 . T . PASS END=155257128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 155257572 . G . PASS END=155257573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 155257574 . A . PASS END=155257574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 155257575 . A . PASS END=155257579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,756:0,69,255:23,0 chr1 155257580 . A . PASS END=155257581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,736:0,52,255:23,0 chr1 155257582 . T . PASS END=155257587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr1 155257588 . A . PASS END=155257588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 155257589 . C . PASS END=155257611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr1 155257612 . A . PASS END=155257612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 155257613 . A . PASS END=155257617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 155257618 . A . PASS END=155257618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 155257619 . G . PASS END=155257746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,825:0,62,255:26,0 chr1 155257747 . G . PASS END=155257748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155257749 . T . PASS END=155257780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 155257781 . T . PASS END=155257796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 155257797 . C . PASS END=155257797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 155257798 . C . PASS END=155257812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 155257813 . G . PASS END=155257817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr1 155257818 . C T, 49.56 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=0.869;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,11,0:0.458,0.000:24:6,6,0:7,5,0:48:84,0,50,364,459,823:255,0,255:12,0:4.9561e+01,6.9893e-05,5.3000e+01,3.6426e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,7,4:6,7,4,7 chr1 155257819 . T . PASS END=155257819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 155257820 . C . PASS END=155257820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155257821 . T . PASS END=155257821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:17,0 chr1 155257822 . G . PASS END=155257845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 155257846 . C . PASS END=155257855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr1 155257856 . G . PASS END=155257872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,900:0,72,255:24,0 chr1 155257873 . C . PASS END=155257876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 155257877 . G . PASS END=155257877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 155257878 . C . PASS END=155257879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:24:0,42,800:0,42,255:23,0 chr1 155257880 . G . PASS END=155257881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 155257882 . C . PASS END=155257883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr1 155257884 . C . PASS END=155257914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr1 155257915 . T . PASS END=155257915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 155257916 . G . PASS END=155257919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 155257920 . C . PASS END=155257920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 155257921 . A . PASS END=155257941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 155257942 . G . PASS END=155257945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155257946 . G . PASS END=155257946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:17,0 chr1 155257947 . C . PASS END=155257949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155257950 . C . PASS END=155257954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 155257955 . G . PASS END=155257958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155257959 . G . PASS END=155257959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:19,0 chr1 155257960 . A . PASS END=155257963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155257964 . C . PASS END=155257987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 155257988 . G . PASS END=155257988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155257989 . G . PASS END=155257991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 155257992 . G . PASS END=155257992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:12,0 chr1 155257993 . C . PASS END=155258009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,540:0,32,255:13,0 chr1 155258010 . T . PASS END=155258010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 155258011 . G . PASS END=155258012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 155258013 . G . PASS END=155258015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 155258016 . C . PASS END=155258019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 155258020 . T . PASS END=155258020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 155258021 . C . PASS END=155258032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 155258033 . G . PASS END=155258037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 155258038 . G . PASS END=155258039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155258040 . G . PASS END=155258054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 155258055 . G . PASS END=155258056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155258057 . C . PASS END=155258058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155258059 . C . PASS END=155258062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155258063 . C . PASS END=155258116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,607:0,48,255:19,0 chr1 155258117 . G . PASS END=155258117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 155258118 . G . PASS END=155258118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 155258119 . G . PASS END=155258125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155258126 . G . PASS END=155258162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,803:0,66,255:23,0 chr1 155258163 . T . PASS END=155258164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 155258165 . G . PASS END=155258168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 155258169 . A . PASS END=155258169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 155258170 . A . PASS END=155258178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 155258179 . G . PASS END=155258224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 155258225 . C . PASS END=155258229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155258230 . T . PASS END=155258230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr1 155258231 . C . PASS END=155258236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155258237 . C . PASS END=155258244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 155258245 . C . PASS END=155258254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 155259086 . C . PASS END=155259086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:120:0,120,1800:0,255,255:40,0 chr1 155259258 . C . PASS END=155259258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 155259296 . A . PASS END=155259296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 155259322 . G . PASS END=155259322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 155259470 . A . PASS END=155259470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 155259497 . A . PASS END=155259497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 155259584 . G . PASS END=155259584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 155259608 . A . PASS END=155259608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1123:0,80,255:29,0 chr1 155259628 . T . PASS END=155259628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 155259781 . C . PASS END=155259781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 155259863 . G . PASS END=155259864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 155260007 . A . PASS END=155260007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 155260012 . A . PASS END=155260012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155260014 . G . PASS END=155260014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 155260021 . G . PASS END=155260021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155260088 . G . PASS END=155260088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 155260349 . G . PASS END=155260350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 155260363 . T . PASS END=155260363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 155260364 . C . PASS END=155260364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 155260365 . A . PASS END=155260450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1108:0,80,255:40,0 chr1 155260451 . A . PASS END=155260469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:25:0,72,938:0,75,255:26,0 chr1 155261547 . C . PASS END=155261568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 155261569 . C . PASS END=155261569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:29,0 chr1 155261570 . C . PASS END=155261668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:31:0,88,1188:0,88,255:40,0 chr1 155261669 . G . PASS END=155261693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:26:0,71,1031:0,71,255:26,0 chr1 155261694 . C . PASS END=155261696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155261697 . G . PASS END=155261725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,880:0,61,255:26,0 chr1 155261726 . G . PASS END=155261726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 155261727 . A . PASS END=155261728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 155262968 . C . PASS END=155262970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,853:0,69,255:26,0 chr1 155262971 . C . PASS END=155262971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 155262972 . C . PASS END=155262982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:31,0 chr1 155262983 . A . PASS END=155262983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 155262984 . G . PASS END=155262997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:33,0 chr1 155262998 . G . PASS END=155263000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 155263001 . G . PASS END=155263007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1280:0,92,255:34,0 chr1 155263008 . A . PASS END=155263008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1211:0,56,255:33,0 chr1 155263009 . C . PASS END=155263066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,92,255:37,0 chr1 155263067 . G . PASS END=155263067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 155263068 . G . PASS END=155263079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1155:0,90,255:31,0 chr1 155263080 . G . PASS END=155263090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 155263091 . A . PASS END=155263091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155263092 . A . PASS END=155263094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,956:0,70,255:26,0 chr1 155263095 . G . PASS END=155263098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 155263099 . C . PASS END=155263099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 155263100 . C . PASS END=155263121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,84,255:34,0 chr1 155263122 . C . PASS END=155263122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:31,0 chr1 155263123 . C . PASS END=155263134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1404:0,111,255:38,0 chr1 155263186 . A . PASS END=155263186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 155263229 . C . PASS END=155263310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1260:0,102,255:40,0 chr1 155263311 . A . PASS END=155263311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr1 155263312 . G . PASS END=155263333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:31,0 chr1 155263334 . T . PASS END=155263339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 155263340 . T . PASS END=155263340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:25,0 chr1 155263341 . G . PASS END=155263353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,862:0,64,255:26,0 chr1 155263354 . G . PASS END=155263354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:24,0 chr1 155263355 . G . PASS END=155263376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 155263377 . A . PASS END=155263377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 155263378 . G . PASS END=155263379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155263380 . A . PASS END=155263380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 155263381 . T . PASS END=155263381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:19,0 chr1 155263385 . G . PASS END=155263385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 155263394 . G . PASS END=155263394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 155264006 . C . PASS END=155264176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:35:0,81,1215:0,89,255:40,0 chr1 155264188 . G . PASS END=155264188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 155264261 . C . PASS END=155264261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:15,0 chr1 155264273 . C . PASS END=155264273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:14,0 chr1 155264274 . T . PASS END=155264295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,440:0,45,255:15,0 chr1 155264296 . A . PASS END=155264305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155264306 . A . PASS END=155264308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 155264309 . A . PASS END=155264309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 155264310 . T . PASS END=155264324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:19,0 chr1 155264325 . C . PASS END=155264359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:23,0 chr1 155264360 . T . PASS END=155264360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 155264361 . C . PASS END=155264364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155264365 . G . PASS END=155264365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 155264366 . G . PASS END=155264371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr1 155264372 . C . PASS END=155264372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 155264373 . G . PASS END=155264384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,881:0,62,255:26,0 chr1 155264385 . C . PASS END=155264385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,873:0,45,255:24,0 chr1 155264386 . A . PASS END=155264386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 155264387 . A . PASS END=155264388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 155264389 . G . PASS END=155264389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155264390 . A . PASS END=155264390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:24,0 chr1 155264391 . C . PASS END=155264399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:27:0,67,978:0,67,255:26,0 chr1 155264400 . C . PASS END=155264400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155264401 . C . PASS END=155264422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,922:0,62,255:26,0 chr1 155264423 . A . PASS END=155264423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,883:0,31,255:22,0 chr1 155264424 . G . PASS END=155264429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 155264430 . G . PASS END=155264430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:25,0 chr1 155264431 . G . PASS END=155264433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 155264434 . G . PASS END=155264434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 155264435 . T . PASS END=155264478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,930:0,62,255:25,0 chr1 155264479 . G . PASS END=155264480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr1 155264481 . T . PASS END=155264486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 155264487 . C . PASS END=155264487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 155264488 . C . PASS END=155264495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155264496 . T . PASS END=155264523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 155264524 . G . PASS END=155264524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr1 155264525 . G . PASS END=155264532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 155264533 . T . PASS END=155264540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:12,0 chr1 155264541 . G . PASS END=155264543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:11,0 chr1 155264907 . C . PASS END=155264927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,807:0,63,255:26,0 chr1 155264928 . A . PASS END=155264929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155264930 . A . PASS END=155264941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,962:0,67,255:26,0 chr1 155264942 . T . PASS END=155264950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,992:0,81,255:31,0 chr1 155264951 . A . PASS END=155264951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr1 155264952 . T . PASS END=155264962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 155264963 . A . PASS END=155264963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 155264964 . C . PASS END=155264964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155264965 . C . PASS END=155264965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 155264966 . G . PASS END=155264973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 155264974 . C . PASS END=155264975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155264976 . G . PASS END=155264978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155264979 . C . PASS END=155265005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,930:0,72,255:24,0 chr1 155265006 . T . PASS END=155265006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 155265007 . G . PASS END=155265007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155265008 . T . PASS END=155265008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 155265009 . T . PASS END=155265013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155265014 . T . PASS END=155265018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 155265019 . C . PASS END=155265019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155265020 . C . PASS END=155265021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155265022 . C . PASS END=155265022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:19,0 chr1 155265023 . G . PASS END=155265025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155265026 . C . PASS END=155265026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 155265027 . G . PASS END=155265027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155265028 . G . PASS END=155265028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155265029 . A . PASS END=155265031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 155265032 . G . PASS END=155265055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 155265056 . T . PASS END=155265056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 155265057 . G . PASS END=155265057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 155265058 . G . PASS END=155265058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 155265059 . G . PASS END=155265063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 155265064 . C . PASS END=155265064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 155265065 . T . PASS END=155265069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr1 155265070 . C . PASS END=155265070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 155265071 . A . PASS END=155265076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 155265077 . A . PASS END=155265077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:14,0 chr1 155265078 . C . PASS END=155265081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155265082 . C . PASS END=155265082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 155265083 . G . PASS END=155265087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr1 155265088 . T . PASS END=155265090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 155265091 . A . PASS END=155265093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr1 155265214 . G . PASS END=155265214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155265227 . C . PASS END=155265231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1218:0,86,255:32,0 chr1 155265232 . T . PASS END=155265232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:31,0 chr1 155265233 . G . PASS END=155265233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1174:0,85,255:32,0 chr1 155265234 . C . PASS END=155265234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:32,0 chr1 155265235 . A . PASS END=155265309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1125:0,80,255:38,0 chr1 155265310 . G . PASS END=155265310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 155265311 . C . PASS END=155265348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1196:0,95,255:36,0 chr1 155265349 . T . PASS END=155265349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 155265350 . C . PASS END=155265350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 155265351 . A . PASS END=155265351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 155265352 . G . PASS END=155265353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 155265354 . A . PASS END=155265359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:26,0 chr1 155265370 . G . PASS END=155265370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155265456 . C . PASS END=155265484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,902:0,75,255:26,0 chr1 155265485 . G . PASS END=155265485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 155265486 . C . PASS END=155265504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:24,0 chr1 155265505 . T . PASS END=155265505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr1 155265506 . T . PASS END=155265511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 155265512 . T . PASS END=155265512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:18,0 chr1 155265513 . C . PASS END=155265538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 155265539 . A . PASS END=155265539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 155265540 . T . PASS END=155265543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 155265544 . G . PASS END=155265547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155265556 . A . PASS END=155265556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155269889 . C . PASS END=155269891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 155269892 . T . PASS END=155269892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 155269893 . G . PASS END=155269893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 155269894 . G . PASS END=155269907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 155269908 . G . PASS END=155269908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 155269909 . G . PASS END=155269909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 155269910 . T . PASS END=155269910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 155269911 . A . PASS END=155269913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 155269914 . G . PASS END=155269914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 155269915 . C . PASS END=155269924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:24,0 chr1 155269925 . C . PASS END=155269925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 155269926 . G . PASS END=155269929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 155269930 . T . PASS END=155269930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 155269931 . C . PASS END=155269931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 155269932 . G . PASS END=155269932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 155269933 . G . PASS END=155269947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 155269948 . A . PASS END=155269948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 155269949 . G . PASS END=155269957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 155269958 . G . PASS END=155269958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 155269959 . T . PASS END=155269962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 155269963 . A . PASS END=155269963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 155269964 . G . PASS END=155269995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 155269996 . T . PASS END=155269996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 155269997 . G . PASS END=155270000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 155270001 . C . PASS END=155270001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 155270002 . T . PASS END=155270004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 155270005 . A . PASS END=155270005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:20,0 chr1 155270006 . A . PASS END=155270008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 155270009 . A . PASS END=155270009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 155270010 . G . PASS END=155270012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155270013 . A . PASS END=155270015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 155270016 . G . PASS END=155270023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 155270024 . C . PASS END=155270033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:18,0 chr1 155270034 . T . PASS END=155270034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 155270035 . T . PASS END=155270050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,507:0,45,255:15,0 chr1 155270051 . G . PASS END=155270059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 155270060 . A . PASS END=155270060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:10,0 chr1 155270061 . C . PASS END=155270065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 155270066 . C . PASS END=155270070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 155270071 . C . PASS END=155270071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 155270072 . C . PASS END=155270072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 155270672 . C . PASS END=155270678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1186:0,83,255:31,0 chr1 155270680 . C . PASS END=155270680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 155271087 . C . PASS END=155271088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1260:0,105,255:35,0 chr1 155271089 . C . PASS END=155271089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:34,0 chr1 155271090 . C . PASS END=155271186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1241:0,84,255:40,0 chr1 155279482 . T . PASS END=155279482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 155279581 . A . PASS END=155279583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,850:0,75,255:25,0 chr1 155279584 . C . PASS END=155279589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 155279590 . T . PASS END=155279590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 155279591 . C . PASS END=155279594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 155279595 . C . PASS END=155279605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,947:0,67,255:26,0 chr1 155279606 . C . PASS END=155279608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 155279609 . T . PASS END=155279609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:27,0 chr1 155279610 . G . PASS END=155279616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:31,0 chr1 155279617 . T . PASS END=155279617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 155279618 . T . PASS END=155279638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:36,0 chr1 155279639 . G . PASS END=155279639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 155279640 . G . PASS END=155279652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,101,1388:0,101,255:37,0 chr1 155279653 . A . PASS END=155279653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 155279654 . G . PASS END=155279654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:35,0 chr1 155279655 . G . PASS END=155279720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1260:0,82,255:40,0 chr1 155279721 . C . PASS END=155279725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr1 155279726 . G . PASS END=155279732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 155279733 . C . PASS END=155279735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 155279736 . A . PASS END=155279736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155279737 . G . PASS END=155279756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 155279834 . A . PASS END=155279957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:32:0,87,1305:0,96,255:40,0 chr1 155279958 . C . PASS END=155279977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:25,0 chr1 155279978 . T . PASS END=155279978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:19,0 chr1 155279979 . A . PASS END=155279984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155279985 . C . PASS END=155279996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 155282046 . G . PASS END=155282164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,1111:0,90,255:40,0 chr1 155282165 . T . PASS END=155282165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr1 155282166 . G . PASS END=155282184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:32,0 chr1 155282185 . T . PASS END=155282186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155282829 . A . PASS END=155282829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,4:110:99:110:0,120,1800:0,236,255:40,0 chr1 155287732 . C . PASS END=155287812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:37:0,84,1429:0,84,255:40,0 chr1 155287960 . C . PASS END=155287972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,754:0,63,255:24,0 chr1 155287973 . T . PASS END=155287973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 155287974 . G . PASS END=155287987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,884:0,72,255:26,0 chr1 155287988 . A . PASS END=155288051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:32,0 chr1 155288052 . T . PASS END=155288052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 155288053 . T . PASS END=155288056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 155288057 . T . PASS END=155288057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 155288058 . G . PASS END=155288073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1070:0,87,255:30,0 chr1 155288074 . T . PASS END=155288074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 155288075 . T . PASS END=155288075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:27,0 chr1 155288076 . C . PASS END=155288084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 155288456 . A . PASS END=155288460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr1 155288461 . C . PASS END=155288464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 155288465 . C . PASS END=155288477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,955:0,78,255:26,0 chr1 155288478 . G . PASS END=155288480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 155288481 . A . PASS END=155288481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155288482 . G . PASS END=155288544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1074:0,80,255:33,0 chr1 155288647 . G . PASS END=155288719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,99,1485:0,110,255:40,0 chr1 155289402 . G . PASS END=155289719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:54:0,120,1800:0,134,255:40,0 chr1 155290200 . G . PASS END=155290382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:84:33:0,84,1258:0,91,255:40,0 chr1 155290383 . T . PASS END=155290383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:36,0 chr1 155290384 . A . PASS END=155290400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:37:0,83,1299:0,83,255:37,0 chr1 155290569 . T . PASS END=155290582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr1 155290583 . A . PASS END=155290583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 155290584 . C . PASS END=155290617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,599:0,48,255:18,0 chr1 155290618 . G . PASS END=155290620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155290621 . G . PASS END=155290624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,31,255:9,0 chr1 155290625 . G . PASS END=155290629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:17:0,36,540:0,51,255:13,0 chr1 155290630 . G . PASS END=155290643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 155290644 . C . PASS END=155290644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155290645 . C . PASS END=155290649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 155290650 . G . PASS END=155290650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 155290651 . C . PASS END=155290653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 155290654 . A . PASS END=155290655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 155290656 . G . PASS END=155290657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 155290658 . G . PASS END=155290659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 155290660 . G . PASS END=155290664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 155290665 . T . PASS END=155290670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 155290671 . G . PASS END=155290673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 155290674 . C . PASS END=155290674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 155290675 . A . PASS END=155290675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:13,0 chr1 155290676 . G . PASS END=155290676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr1 155290677 . G . PASS END=155290679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 155290680 . A . PASS END=155290680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 155290681 . G . PASS END=155290687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 155290688 . C . PASS END=155290688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 155290689 . T . PASS END=155290716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,621:0,41,255:19,0 chr1 155290717 . C . PASS END=155290729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr1 155290730 . A . PASS END=155290730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:22,0 chr1 155290731 . C . PASS END=155290732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 155290733 . G . PASS END=155290733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 155290734 . T . PASS END=155290778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,856:0,62,255:26,0 chr1 155290779 . C . PASS END=155290779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 155290780 . C . PASS END=155290794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:22,0 chr1 155290795 . C . PASS END=155290795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 155290796 . G . PASS END=155290800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 155290801 . A . PASS END=155290803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 155290804 . G . PASS END=155290808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:21,0 chr1 155290809 . A . PASS END=155290809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:20,0 chr1 155290810 . G . PASS END=155290810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 155290811 . A . PASS END=155290811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,834:0,50,255:20,0 chr1 155290812 . C . PASS END=155290818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 155290819 . A . PASS END=155290819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:19,0 chr1 155290820 . C . PASS END=155290820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155290821 . C . PASS END=155290821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 155290822 . T . PASS END=155290833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 155290834 . G . PASS END=155290834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 155290835 . C . PASS END=155290877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 155290878 . G . PASS END=155290878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 155290879 . C . PASS END=155290880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155290881 . G . PASS END=155290881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 155290882 . T . PASS END=155290904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:23,0 chr1 155290905 . A . PASS END=155290906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:22,0 chr1 155290907 . G . PASS END=155290956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,914:0,62,255:25,0 chr1 155290957 . A . PASS END=155290957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 155290958 . G . PASS END=155291004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,861:0,69,255:25,0 chr1 155291005 . G . PASS END=155291005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155291006 . C . PASS END=155291036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr1 155291037 . T . PASS END=155291037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 155291038 . T . PASS END=155291045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:20,0 chr1 155291046 . T . PASS END=155291063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,721:0,47,255:19,0 chr1 155291064 . C . PASS END=155291064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:16,0 chr1 155291065 . G . PASS END=155291071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:18:0,41,645:0,41,255:16,0 chr1 155291072 . C . PASS END=155291075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,41,255:13,0 chr1 155291076 . C . PASS END=155291080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr1 155291081 . A . PASS END=155291081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,584:0,26,255:14,0 chr1 155291082 . T . PASS END=155291084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 155291085 . T . PASS END=155291085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:18,0 chr1 155291086 . C . PASS END=155291090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155291091 . T . PASS END=155291091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 155291092 . C . PASS END=155291093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155291094 . T . PASS END=155291094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 155291095 . T . PASS END=155291095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:16,0 chr1 155291096 . T . PASS END=155291097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155291098 . A . PASS END=155291098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 155291099 . G . PASS END=155291117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,621:0,40,255:19,0 chr1 155291118 . C . PASS END=155291118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 155291119 . C . PASS END=155291132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,676:0,44,255:19,0 chr1 155291133 . C . PASS END=155291133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 155291134 . T . PASS END=155291137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr1 155291138 . A . PASS END=155291138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:17,0 chr1 155291139 . G . PASS END=155291140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155291141 . A . PASS END=155291141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,643:0,13,255:17,0 chr1 155291142 . A . PASS END=155291153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:16,0 chr1 155291154 . G . PASS END=155291155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 155291156 . G . PASS END=155291158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155291159 . C . PASS END=155291206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:13,0 chr1 155291207 . G . PASS END=155291208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 155291209 . C . PASS END=155291226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 155291227 . C . PASS END=155291229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 155291230 . C . PASS END=155291240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 155291241 . C . PASS END=155291256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 155291257 . T . PASS END=155291257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr1 155291258 . T . PASS END=155291272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:8,0 chr1 155291273 . G . PASS END=155291273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 155291274 . C . PASS END=155291279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 155291565 . A . PASS END=155291565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 155291566 . T . PASS END=155291566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 155291567 . G . PASS END=155291568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 155291569 . T . PASS END=155291569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 155291570 . G . PASS END=155291572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 155291573 . C . PASS END=155291582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 155291583 . G . PASS END=155291584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 155291585 . T . PASS END=155291586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr1 155291587 . T . PASS END=155291593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:29,0 chr1 155291594 . C . PASS END=155291594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,0 chr1 155291595 . A . PASS END=155291637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1144:0,87,255:34,0 chr1 155291638 . A . PASS END=155291638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 155291639 . C . PASS END=155291648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 155291649 . C . PASS END=155291649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 155291650 . G . PASS END=155291650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 155291651 . T . PASS END=155291651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:29,0 chr1 155291652 . C . PASS END=155291653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 155291654 . T . PASS END=155291665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,79,255:26,0 chr1 155291666 . G . PASS END=155291669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 155291670 . C . PASS END=155291670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:28,0 chr1 155291671 . C . PASS END=155291671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 155291672 . T . PASS END=155291672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 155291673 . T . PASS END=155291673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 155291674 . T . PASS END=155291674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 155291675 . G . PASS END=155291680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 155291681 . A . PASS END=155291681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:27,0 chr1 155291682 . C . PASS END=155291689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 155291690 . T . PASS END=155291708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr1 155291709 . A . PASS END=155291709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 155291710 . A . PASS END=155291728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:26,0 chr1 155291729 . C . PASS END=155291731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155291732 . T . PASS END=155291742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,67,255:26,0 chr1 155291743 . T . PASS END=155291743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:19,0 chr1 155291744 . G . PASS END=155291747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr1 155291748 . G . PASS END=155291748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 155291749 . C . PASS END=155291751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155291752 . A . PASS END=155291754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:22,0 chr1 155291755 . C . PASS END=155291756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 155291757 . A . PASS END=155291758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 155291759 . C . PASS END=155291759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155291760 . A . PASS END=155291760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:18,0 chr1 155291761 . G . PASS END=155291761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 155291762 . C . PASS END=155291765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,61,255:20,0 chr1 155291766 . G . PASS END=155291766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:21,0 chr1 155291767 . C . PASS END=155291772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,886:0,61,255:22,0 chr1 155291773 . C . PASS END=155291776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:23:0,57,855:0,58,255:19,0 chr1 155291777 . C . PASS END=155291781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155291782 . G . PASS END=155291782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr1 155291783 . C . PASS END=155291783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr1 155291784 . T . PASS END=155291787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 155291788 . A . PASS END=155291792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 155291793 . C . PASS END=155291793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 155291794 . A . PASS END=155291805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr1 155291806 . T . PASS END=155291806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 155291807 . A . PASS END=155291833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,631:0,41,255:19,0 chr1 155291834 . G . PASS END=155291834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:18,0 chr1 155291835 . G . PASS END=155291839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155291840 . G . PASS END=155291840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155291841 . G . PASS END=155291841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155291842 . G . PASS END=155291842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 155291843 . G . PASS END=155291843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155291844 . G . PASS END=155291845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 155291846 . T . PASS END=155291849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 155291850 . T . PASS END=155291850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 155291851 . C . PASS END=155291880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,754:0,63,255:24,0 chr1 155291881 . T . PASS END=155291881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 155291882 . C . PASS END=155291882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 155291883 . A . PASS END=155291883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 155291884 . G . PASS END=155291886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 155291887 . C . PASS END=155291887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 155291888 . C . PASS END=155291890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 155291891 . C . PASS END=155291891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 155291892 . T . PASS END=155291901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,705:0,68,255:23,0 chr1 155291902 . G . PASS END=155291929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,765:0,50,255:20,0 chr1 155291930 . C . PASS END=155291955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr1 155291956 . A . PASS END=155291956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 155291957 . T . PASS END=155291961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr1 155291962 . A . PASS END=155291966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 155291967 . C . PASS END=155291984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:25,0 chr1 155291985 . C . PASS END=155291985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155291986 . T . PASS END=155292024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 155292025 . C . PASS END=155292027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 155292028 . G . PASS END=155292034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155292035 . G . PASS END=155292036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155292037 . A . PASS END=155292038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155292039 . A . PASS END=155292050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1141:0,84,255:30,0 chr1 155292051 . T . PASS END=155292074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,962:0,78,255:26,0 chr1 155292075 . T . PASS END=155292075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,693:0,44,255:24,0 chr1 155292076 . C . PASS END=155292082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,842:0,78,255:26,0 chr1 155292083 . A . PASS END=155292083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 155292084 . C . PASS END=155292096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1024:0,71,255:26,0 chr1 155292097 . T . PASS END=155292097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:22,0 chr1 155292098 . G . PASS END=155292125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 155292126 . T . PASS END=155292144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 155292145 . C . PASS END=155292145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 155292146 . A . PASS END=155292146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 155292147 . G . PASS END=155292148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 155292149 . C . PASS END=155292158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 155292159 . G . PASS END=155292179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:26,0 chr1 155292180 . G . PASS END=155292180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155292181 . A . PASS END=155292184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:24,0 chr1 155292185 . C . PASS END=155292213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1219:0,85,255:36,0 chr1 155292214 . A . PASS END=155292214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:34,0 chr1 155292215 . T . PASS END=155292217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1357:0,108,255:37,0 chr1 155292218 . G . PASS END=155292218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1152:0,78,255:35,0 chr1 155292219 . A . PASS END=155292268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,101,1388:0,101,255:38,0 chr1 155292269 . G . PASS END=155292269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1323:0,78,255:38,2 chr1 155292270 . A . PASS END=155292270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:34:40:0,34,1310:0,34,255:37,2 chr1 155292271 . A . PASS END=155292313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:39:0,86,1390:0,86,255:40,0 chr1 155292314 . A . PASS END=155292314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:40,0 chr1 155292315 . A . PASS END=155292433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:38:0,89,1321:0,89,255:40,0 chr1 155292434 . A . PASS END=155292434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:37,0 chr1 155292435 . G . PASS END=155292463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1215:0,96,255:40,0 chr1 155292464 . A . PASS END=155292464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1426:0,79,255:27,0 chr1 155292465 . A . PASS END=155292470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,91,255:29,0 chr1 155292471 . G . PASS END=155292471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:27,0 chr1 155292472 . T . PASS END=155292477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 155292478 . A . PASS END=155292478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 155292479 . G . PASS END=155292482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155292483 . C . PASS END=155292504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:26:0,66,990:0,71,255:26,0 chr1 155292505 . C . PASS END=155292505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:21,0 chr1 155292506 . G . PASS END=155292509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 155292510 . T . PASS END=155292510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 155292511 . T . PASS END=155292513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155292514 . A . PASS END=155292514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 155292515 . C . PASS END=155292516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155292517 . A . PASS END=155292517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 155292518 . G . PASS END=155292534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 155292535 . A . PASS END=155292535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 155292536 . G . PASS END=155292537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 155292538 . G . PASS END=155292538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:15,0 chr1 155292539 . G . PASS END=155292539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 155292540 . G . PASS END=155292556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:30:15:0,30,450:0,41,255:13,0 chr1 155292557 . T . PASS END=155292557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 155292558 . G . PASS END=155292559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155292560 . C . PASS END=155292572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 155292573 . A . PASS END=155292596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 155292597 . G . PASS END=155292615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:9:0,20,333:0,20,255:9,0 chr1 155292616 . A . PASS END=155292648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 155292649 . C . LowGQ END=155292649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 155292650 . G . PASS END=155292721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 155292722 . G . PASS END=155292724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 155292725 . T . PASS END=155292730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:15,0 chr1 155292731 . C . PASS END=155292738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 155292739 . T . PASS END=155292739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:11,0 chr1 155292740 . T . PASS END=155292740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 155292741 . G . PASS END=155292741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 155292742 . G . PASS END=155292743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 155292744 . T . PASS END=155292744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr1 155292745 . G . PASS END=155292747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 155292748 . C . PASS END=155292748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 155292749 . T . PASS END=155292755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 155292756 . C . PASS END=155292756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr1 155292757 . C . PASS END=155292757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155292758 . G . PASS END=155292759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,282:0,16,255:9,0 chr1 155292760 . C . PASS END=155292760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155292761 . C . PASS END=155292761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 155292762 . C . PASS END=155292762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155292763 . G . LowGQ END=155292763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,255:0,0,255:8,0 chr1 155292764 . G . PASS END=155292764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155292765 . C . PASS END=155292765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:9,0 chr1 155292766 . C . PASS END=155292766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr1 155292767 . C . PASS END=155292769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155292770 . A . PASS END=155292770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 155292771 . C . PASS END=155292775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 155292776 . G . LowGQ END=155292776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,241:50,0,255:8,0 chr1 155292777 . C . PASS END=155292778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 155292779 . T . LowGQ END=155292780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:12:0,0,255:0,0,255:11,0 chr1 155292781 . T . PASS END=155292781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155292782 . C . PASS END=155292782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:12,0 chr1 155292783 . C . PASS END=155292784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155292785 . T . LowGQ END=155292785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,308:11,0,255:10,0 chr1 155292786 . C . PASS END=155292786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr1 155292787 . C . PASS END=155292789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 155292790 . G . LowGQ END=155292791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,241:0,0,255:11,0 chr1 155292792 . A . PASS END=155292792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,399:0,39,255:13,0 chr1 155292793 . G . LowGQ END=155292795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,304:0,0,255:12,0 chr1 155292796 . A . PASS END=155292796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 155292797 . G . LowGQ END=155292798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,349:0,0,255:11,0 chr1 155292799 . A . PASS END=155292799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 155292800 . G . LowGQ END=155292800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,316:11,0,255:10,0 chr1 155292801 . A . PASS END=155292801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 155292802 . A . PASS END=155292802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155292803 . C . LowGQ END=155292803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,286:33,0,255:9,0 chr1 155292804 . C . PASS END=155292804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155292805 . G . LowGQ END=155292807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,316:0,0,255:10,0 chr1 155292808 . C . PASS END=155292808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 155292809 . T . LowGQ END=155292809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,235:25,0,255:9,0 chr1 155292810 . G . PASS END=155292811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 155292812 . A . PASS END=155292812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,457:0,11,255:11,0 chr1 155292813 . C . PASS END=155292813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 155292814 . T . LowGQ END=155292814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,341:16,0,255:7,0 chr1 155292815 . G . PASS END=155292817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 155292818 . G . PASS END=155292818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,354:0,3,255:9,0 chr1 155292819 . C . PASS END=155292819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 155292820 . C . PASS END=155292821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 155292822 . A . LowGQ END=155292823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,365:0,0,255:10,0 chr1 155292824 . A . PASS END=155292824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 155292825 . G . LowGQ END=155292825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,332:8,0,255:9,0 chr1 155292826 . C . PASS END=155292826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,368:0,25,255:11,0 chr1 155292827 . G . PASS END=155292827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,310:0,3,255:10,0 chr1 155292828 . G . PASS END=155292828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 155292829 . A . LowGQ END=155292829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,196:64,0,255:9,0 chr1 155292830 . G . PASS END=155292830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 155292831 . G . PASS END=155292833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 155292834 . C . LowGQ END=155292835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,288:0,0,255:10,0 chr1 155292836 . G . PASS END=155292837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 155292838 . C . PASS END=155292838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155292839 . C . PASS END=155292839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 155292840 . G . LowGQ END=155292840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,241:42,0,255:9,0 chr1 155292841 . A . PASS END=155292841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 155292842 . G . LowGQ END=155292842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:19,0,255:10,0 chr1 155292843 . G . PASS END=155292843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 155292844 . A . LowGQ END=155292845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,296:0,0,255:10,0 chr1 155292846 . G . PASS END=155292847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 155292848 . C . LowGQ END=155292848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,277:14,0,255:8,0 chr1 155292849 . C . PASS END=155292849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 155292850 . G . PASS END=155292851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:9,0 chr1 155292852 . G . PASS END=155292852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 155292853 . C . LowGQ END=155292854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:11:0,0,255:0,0,255:9,0 chr1 155292855 . G . PASS END=155292855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155292856 . T . PASS END=155292857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 155292858 . A . PASS END=155292858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 155292859 . G . LowGQ END=155292859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,269:3,0,255:7,0 chr1 155292860 . C . PASS END=155292860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:7,0 chr1 155292861 . C . PASS END=155292862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 155292863 . A . PASS END=155292865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:7,0 chr1 155292866 . G . LowGQ END=155292866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,233:25,0,255:7,0 chr1 155292867 . G . PASS END=155292867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 155292868 . C . PASS END=155292869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:6,0 chr1 155292870 . G . LowGQ END=155292870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:6,0 chr1 155292871 . G . PASS END=155292872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:6,0 chr1 155292873 . G . LowGQ END=155292874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:6,0 chr1 155292875 . G . PASS END=155292876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 155292877 . A . LowGQ END=155292880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:0,0,210:7,0 chr1 155292881 . C . PASS END=155292881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 155292882 . C . LowGQ END=155292882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr1 155292883 . C . PASS END=155292888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 155292889 . C . PASS END=155292889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 155292890 . G . LowGQ END=155292891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,194:4,0,200:8,0 chr1 155292892 . A . PASS END=155292894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 155292895 . A . PASS END=155292895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr1 155292896 . G . PASS END=155292913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 155292914 . C . PASS END=155292914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 155292915 . C . PASS END=155292916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 155292917 . G . PASS END=155292917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:4,0 chr1 155292918 . G . PASS END=155292921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 155293193 . C . PASS END=155293195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 155293196 . G . PASS END=155293200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 155293201 . C . PASS END=155293220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,376:0,36,255:13,0 chr1 155293221 . G . PASS END=155293225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 155293226 . T . PASS END=155293226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 155293227 . C . PASS END=155293251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:16,0 chr1 155293252 . C . PASS END=155293252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 155293253 . T . PASS END=155293270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:17,0 chr1 155293271 . C . PASS END=155293271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 155293272 . A . PASS END=155293284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155293285 . T . PASS END=155293285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:13,0 chr1 155293286 . C . PASS END=155293288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 155293289 . T . PASS END=155293297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 155293298 . C . PASS END=155293299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155293300 . C . PASS END=155293300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:15,0 chr1 155293301 . C . PASS END=155293306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,521:0,48,255:16,0 chr1 155293307 . C . PASS END=155293307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 155293308 . C . PASS END=155293308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 155293309 . G . PASS END=155293309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 155293310 . G . PASS END=155293311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 155293312 . T . PASS END=155293312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 155293313 . G . PASS END=155293318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155293319 . G . PASS END=155293320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 155293321 . G . PASS END=155293327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 155293328 . T . PASS END=155293328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 155293329 . G . PASS END=155293332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 155293333 . C . PASS END=155293334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 155293335 . G . PASS END=155293336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155293337 . T . PASS END=155293337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 155293338 . G . PASS END=155293339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 155293340 . G . PASS END=155293349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:13,0 chr1 155293350 . C . PASS END=155293351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 155293352 . C . PASS END=155293352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,635:0,13,255:17,0 chr1 155293353 . C . PASS END=155293358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,599:0,40,255:19,0 chr1 155293359 . G . PASS END=155293359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:17,0 chr1 155293360 . G . PASS END=155293361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 155293362 . G . PASS END=155293364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155293365 . G . PASS END=155293368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155293369 . C . PASS END=155293369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 155293370 . T . PASS END=155293373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155293374 . C . PASS END=155293376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 155293377 . C . PASS END=155293379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155293380 . C . PASS END=155293380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 155293381 . C . PASS END=155293381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 155293382 . T . PASS END=155293382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,666:0,46,255:20,0 chr1 155293383 . G . PASS END=155293396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:21,0 chr1 155293397 . C . PASS END=155293397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 155293398 . C . PASS END=155293428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,795:0,68,255:25,0 chr1 155293429 . T . PASS END=155293438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 155293439 . G . PASS END=155293439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 155293440 . C . PASS END=155293445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 155293446 . G . PASS END=155293446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 155293447 . C . PASS END=155293457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 155293458 . G . PASS END=155293465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1201:0,89,255:34,0 chr1 155293466 . C . PASS END=155293466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:33,0 chr1 155293467 . G . PASS END=155293471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:34:0,91,1205:0,91,255:34,0 chr1 155293472 . T . PASS END=155293472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1070:0,38,255:31,0 chr1 155293473 . T . PASS END=155293480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:33,0 chr1 155293481 . G . PASS END=155293481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:32,0 chr1 155293482 . T . PASS END=155293482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:32,0 chr1 155293483 . A . PASS END=155293483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1184:0,50,255:31,0 chr1 155293484 . G . PASS END=155293484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:33,0 chr1 155293485 . C . PASS END=155293486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:56:37:0,56,1106:0,56,255:34,0 chr1 155293487 . C . PASS END=155293487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1238:0,75,255:35,0 chr1 155293488 . C . PASS END=155293488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1189:0,34,255:33,0 chr1 155293489 . T . PASS END=155293489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1194:0,53,255:33,0 chr1 155293490 . T . PASS END=155293490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:35,0 chr1 155293491 . C . PASS END=155293491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1217:0,56,255:32,0 chr1 155293492 . C . PASS END=155293492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 155293493 . C . PASS END=155293493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1140:0,39,255:30,0 chr1 155293494 . C . PASS END=155293494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 155293495 . G . PASS END=155293495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:17:37:0,17,1058:0,17,255:30,0 chr1 155293496 . C . PASS END=155293496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:44:38:0,44,1146:0,44,255:32,0 chr1 155293497 . C . PASS END=155293498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1252:0,75,255:33,0 chr1 155293499 . C . PASS END=155293499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1117:0,39,255:32,0 chr1 155293500 . G . PASS END=155293500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1091:0,55,255:32,0 chr1 155293501 . G . PASS END=155293501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1222:0,75,255:33,0 chr1 155293502 . C . PASS END=155293502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:6:37:0,6,972:0,6,255:31,0 chr1 155293503 . T . PASS END=155293504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:37:0,93,1021:0,93,255:34,0 chr1 155293505 . C . PASS END=155293505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:33,0 chr1 155293506 . C . PASS END=155293506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:33,0 chr1 155293507 . C . PASS END=155293508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1268:0,83,255:34,0 chr1 155293509 . A . LowGQ END=155293509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,11:39:0:39:0,0,651:124,0,255:26,0 chr1 155293510 . C . PASS END=155293510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:37:41:0,37,1304:0,37,255:35,0 chr1 155293511 . C . PASS END=155293511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1390:0,71,255:37,0 chr1 155293512 . C . PASS END=155293512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:54:44:0,54,1414:0,54,255:39,0 chr1 155293513 . C . PASS END=155293513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 155293514 . G . LowGQ END=155293514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,7:43:0:43:0,0,967:24,0,255:33,0 chr1 155293515 . C . PASS END=155293515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:59:43:0,59,1316:0,59,255:39,0 chr1 155293516 . C . PASS END=155293516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1410:0,90,255:40,0 chr1 155293517 . A . LowGQ END=155293518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,7:43:0:43:0,0,911:32,0,255:33,1 chr1 155293519 . G . PASS END=155293519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:82:46:0,82,1463:0,82,255:40,0 chr1 155293520 . T . LowGQ END=155293521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,10:46:0:46:0,0,1059:23,0,255:37,0 chr1 155293522 . C . PASS END=155293523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:49:46:0,49,1344:0,49,255:39,0 chr1 155293524 . C . PASS END=155293524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 155293525 . G . LowGQ END=155293525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,9:46:0:46:0,0,1100:34,0,255:35,0 chr1 155293526 . C . PASS END=155293527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:83:46:0,83,1415:0,83,255:40,0 chr1 155293528 . C . PASS END=155293528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1413:0,63,255:40,0 chr1 155293529 . C . PASS END=155293532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:45:0,80,1466:0,80,255:40,0 chr1 155293533 . G . PASS END=155293533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:37:45:0,37,1221:0,37,255:37,0 chr1 155293534 . C . PASS END=155293534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:88:46:0,88,1535:0,88,255:40,0 chr1 155293535 . T . LowGQ END=155293535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,9:45:0:45:0,0,1067:51,0,255:35,0 chr1 155293536 . G . PASS END=155293537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:44:46:0,44,1319:0,44,255:40,0 chr1 155293538 . C . PASS END=155293538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr1 155293539 . A . LowGQ END=155293539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,9:46:0:46:0,0,1138:40,0,255:36,0 chr1 155293540 . C . PASS END=155293541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,100,1644:0,100,255:40,0 chr1 155293542 . G . LowGQ END=155293542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,8:50:0:50:0,0,1304:19,0,255:40,0 chr1 155293543 . C . PASS END=155293543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:98:49:0,98,1672:0,98,255:40,0 chr1 155293544 . A . LowGQ END=155293544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,8:50:0:50:0,0,1323:5,0,255:40,0 chr1 155293545 . A . PASS END=155293545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:50:50:0,50,1449:0,50,255:40,0 chr1 155293546 . C . PASS END=155293547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,117,1685:0,117,255:40,0 chr1 155293548 . T . LowGQ END=155293548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,9:50:0:50:0,0,1261:72,0,255:40,0 chr1 155293549 . C . PASS END=155293549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,117,1723:0,117,255:40,0 chr1 155293550 . G . PASS END=155293550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:8:50:0,8,1393:0,8,255:40,0 chr1 155293551 . T . PASS END=155293552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:67:50:0,67,1460:0,67,255:40,0 chr1 155293553 . C . PASS END=155293553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:99:51:0,104,1759:0,104,255:40,0 chr1 155293554 . G . PASS END=155293554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:72:51:0,72,1590:0,72,255:40,0 chr1 155293555 . C . PASS END=155293556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 155293557 . G . LowGQ END=155293558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,8:51:0:51:0,0,1408:16,0,255:40,0 chr1 155293559 . A . PASS END=155293559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:99:51:0,103,1697:0,103,255:40,0 chr1 155293560 . G . LowGQ END=155293560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,7:51:0:51:0,0,1410:30,0,255:40,0 chr1 155293561 . G . PASS END=155293561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1566:0,67,255:40,0 chr1 155293562 . C . PASS END=155293562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:45:51:0,45,1581:0,45,255:40,0 chr1 155293563 . C . PASS END=155293565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1703:0,120,255:40,0 chr1 155293566 . T . PASS END=155293566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,7:52:26:52:0,26,1546:0,26,255:40,0 chr1 155293567 . C . PASS END=155293575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:84:49:0,84,1643:0,84,255:40,0 chr1 155293576 . A . PASS END=155293576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:59:49:0,59,1551:0,59,255:40,0 chr1 155293577 . G . PASS END=155293582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:97:47:0,97,1597:0,97,255:40,0 chr1 155293583 . C . PASS END=155293584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,121,255:40,0 chr1 155293585 . T . PASS END=155293585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:52:46:0,52,1496:0,52,255:39,0 chr1 155293586 . C . PASS END=155293586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1457:0,72,255:37,0 chr1 155293587 . G . PASS END=155293589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,107,1601:0,107,255:40,0 chr1 155293590 . T . PASS END=155293590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1423:0,66,255:37,0 chr1 155293591 . C . PASS END=155293596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:43:0,80,1485:0,80,255:38,0 chr1 155293597 . A . PASS END=155293597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:18:42:0,18,1305:0,18,255:32,0 chr1 155293598 . G . PASS END=155293599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:42:0,90,1350:0,93,255:32,0 chr1 155293600 . C . PASS END=155293600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1341:0,76,255:28,0 chr1 155293601 . T . PASS END=155293603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1350:0,87,255:30,0 chr1 155294209 . A . PASS END=155294220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 155294221 . T . PASS END=155294221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr1 155294222 . G . PASS END=155294236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,854:0,69,255:24,0 chr1 155294237 . G . PASS END=155294238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 155294239 . A . PASS END=155294239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 155294240 . G . PASS END=155294240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 155294241 . G . PASS END=155294241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 155294242 . C . PASS END=155294259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:25,0 chr1 155294260 . C . PASS END=155294260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 155294261 . G . PASS END=155294261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 155294262 . G . PASS END=155294262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:21,0 chr1 155294263 . T . PASS END=155294273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 155294274 . A G, 125.25 PASS DP=27;MQ=246.94;FractionInformativeReads=0.963 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,13,0:0,13,0:75:163,78,0,992,78,992:255,78,0:0,0:1.2525e+02,7.5247e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,14:0,0,15,11 chr1 155294275 . C . PASS END=155294293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,901:0,62,255:25,0 chr1 155294294 . C . PASS END=155294294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 155294295 . G . PASS END=155294309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,857:0,62,255:26,0 chr1 155294310 . A . PASS END=155294311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:26:0,45,675:0,78,255:15,0 chr1 155294312 . A . PASS END=155294318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:24:0,42,630:0,72,255:15,0 chr1 155294319 . A . PASS END=155294323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:17:0,39,585:0,51,255:13,0 chr1 155294324 . G . PASS END=155294324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 155294325 . G . PASS END=155294335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 155294636 . T . PASS END=155294642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 155294643 . T . PASS END=155294649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,602:0,60,255:23,0 chr1 155294650 . T . PASS END=155294650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 155294651 . C . PASS END=155294652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 155294653 . T . PASS END=155294653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 155294654 . T . PASS END=155294675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr1 155294676 . G . PASS END=155294676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 155294677 . C . PASS END=155294681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 155294682 . G . PASS END=155294686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 155294687 . T . PASS END=155294708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 155294709 . T . PASS END=155294709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 155294710 . G . PASS END=155294734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,923:0,75,255:26,0 chr1 155294893 . G . PASS END=155294898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,930:0,66,255:24,0 chr1 155294899 . T . PASS END=155294899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 155294900 . G . PASS END=155294922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 155294923 . A . PASS END=155294923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 155294924 . T . PASS END=155294931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 155294932 . T . PASS END=155294932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 155294933 . C . PASS END=155294934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155294935 . C . PASS END=155294960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,653:0,41,255:19,0 chr1 155294961 . G . PASS END=155294962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 155294963 . G . PASS END=155294963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 155294964 . C . PASS END=155294964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr1 155294965 . A . PASS END=155294969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:18,0 chr1 155294999 . A . PASS END=155295000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr1 155295001 . G . PASS END=155295001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 155295002 . A . PASS END=155295005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:27:17:0,27,405:0,37,255:9,0 chr1 155295006 . G . PASS END=155295015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:14:0,30,450:0,37,255:13,0 chr1 155295016 . G . PASS END=155295050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:18,0 chr1 155295051 . T . PASS END=155295051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 155295052 . G . PASS END=155295081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,720:0,44,255:19,0 chr1 155295082 . G . PASS END=155295107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 155295108 . C . PASS END=155295126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,676:0,54,255:19,0 chr1 155295127 . G . PASS END=155295134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 155295135 . C . PASS END=155295152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,743:0,47,255:19,0 chr1 155295153 . T . PASS END=155295153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155295154 . G . PASS END=155295156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 155295157 . G . PASS END=155295157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155295158 . A . PASS END=155295161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 155295162 . C . PASS END=155295170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155295171 . C . PASS END=155295171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 155295172 . G . PASS END=155295179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 155295180 . A . PASS END=155295182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 155295183 . C . PASS END=155295202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 155295203 . A . PASS END=155295203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 155295204 . A . PASS END=155295249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 155295250 . C . PASS END=155295259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 155295260 . G . PASS END=155295265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155295266 . G . PASS END=155295266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr1 155295267 . C . PASS END=155295277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155295278 . C . PASS END=155295281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 155295358 . G . PASS END=155295463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:34:0,93,1296:0,96,255:40,0 chr1 155295655 . C . PASS END=155295701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,139,255:40,0 chr1 155296371 . G . PASS END=155296374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 155296375 . G . PASS END=155296381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,837:0,66,255:26,0 chr1 155296382 . C . PASS END=155296448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1158:0,88,255:35,0 chr1 155296449 . T . PASS END=155296449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 155296450 . G . PASS END=155296506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1172:0,93,255:32,0 chr1 155296507 . G . PASS END=155296523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:24,0 chr1 155296524 . C . PASS END=155296524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 155296525 . C . PASS END=155296527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155296528 . G . PASS END=155296545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:19,0 chr1 155296546 . T . PASS END=155296563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 155296564 . T . PASS END=155296564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 155296565 . C . PASS END=155296566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 155296567 . A . PASS END=155296567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 155296568 . G . PASS END=155296582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 155296583 . A . PASS END=155296588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 155296589 . G . PASS END=155296595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 155296596 . T . PASS END=155296596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,405:0,3,255:11,0 chr1 155296597 . G . PASS END=155296610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,415:0,39,255:13,0 chr1 155296611 . G . PASS END=155296613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 155296614 . T . PASS END=155296625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 155296626 . T . PASS END=155296626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 155296627 . T . PASS END=155296651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,380:0,33,255:12,0 chr1 155296652 . T . PASS END=155296652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 155296653 . C . PASS END=155296667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,389:0,36,255:12,0 chr1 155296668 . C . PASS END=155296672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 155296673 . A . PASS END=155296673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 155296674 . A . PASS END=155296677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155296678 . T . PASS END=155296678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155296679 . C . PASS END=155296679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 155296680 . C . PASS END=155296681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155296682 . A . PASS END=155296684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155296685 . C . PASS END=155296691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 155296692 . G . PASS END=155296692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 155296693 . C . PASS END=155296700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 155296701 . A . PASS END=155296705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155296706 . T . PASS END=155296706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:11,0 chr1 155296707 . T . PASS END=155296707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 155296708 . G . PASS END=155296711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155296712 . C . PASS END=155296712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 155296713 . A . PASS END=155296721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,495:0,31,255:13,0 chr1 155296722 . G . PASS END=155296722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,452:0,9,255:11,0 chr1 155296723 . G . PASS END=155296726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,495:0,31,255:12,0 chr1 155296727 . T . LowGQ END=155296727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,394:13,0,255:11,0 chr1 155296728 . A . PASS END=155296755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 155296756 . T . PASS END=155296756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 155296757 . C . PASS END=155296780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 155296781 . C . PASS END=155296781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 155296782 . A . PASS END=155296782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155296783 . T . PASS END=155296799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 155296800 . A . PASS END=155296800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155296801 . A . PASS END=155296801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 155296802 . G . PASS END=155296802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155296803 . G . PASS END=155296812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 155296813 . G . PASS END=155296814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 155296815 . G . PASS END=155296851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:19,0 chr1 155296852 . C . PASS END=155296855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 155296856 . T . PASS END=155296891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,623:0,44,255:19,0 chr1 155296892 . G . PASS END=155296892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 155296893 . C . PASS END=155296894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 155296895 . G . PASS END=155296895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 155296896 . A . PASS END=155296904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 155296905 . A . PASS END=155296905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 155296906 . T . PASS END=155296906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155296907 . G . PASS END=155296923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 155297941 . G . PASS END=155297944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr1 155297945 . C . PASS END=155297945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 155297946 . C . PASS END=155297953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155297954 . T . PASS END=155298017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1086:0,84,255:38,0 chr1 155298018 . C . PASS END=155298048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 155298049 . G . PASS END=155298049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 155298050 . A . PASS END=155298050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 155298051 . T . PASS END=155298066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 155300194 . G . PASS END=155300194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 155300195 . G . PASS END=155300197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 155300198 . G . PASS END=155300207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,970:0,67,255:26,0 chr1 155300208 . T . PASS END=155300208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155300209 . C . PASS END=155300210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:27,0 chr1 155300211 . G . PASS END=155300212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 155300213 . G . PASS END=155300213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 155300214 . A . PASS END=155300226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1097:0,87,255:32,0 chr1 155300227 . A . PASS END=155300227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 155300228 . A . PASS END=155300232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 155300233 . T . PASS END=155300233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:31,0 chr1 155300234 . G . PASS END=155300258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1114:0,86,255:36,0 chr1 155300259 . A . PASS END=155300259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:33,0 chr1 155300260 . A . PASS END=155300282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1325:0,95,255:37,0 chr1 155300283 . T . PASS END=155300283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:33,0 chr1 155300284 . G . PASS END=155300326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1185:0,80,255:36,0 chr1 155300327 . C . PASS END=155300335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1035:0,71,255:25,0 chr1 155300336 . G . PASS END=155300343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,68,255:19,0 chr1 155300344 . T . PASS END=155300345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:20,0 chr1 155300346 . C . PASS END=155300346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 155300347 . C . PASS END=155300351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155300352 . T . PASS END=155300362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 155307451 . T . PASS END=155307542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,105,1552:0,109,255:40,0 chr1 155307880 . C . PASS END=155307918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1186:0,85,255:39,0 chr1 155307919 . T . PASS END=155307919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1336:0,68,255:36,0 chr1 155307920 . C . PASS END=155307998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,106,1620:0,106,255:40,0 chr1 155307999 . G . PASS END=155307999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1543:0,58,255:40,2 chr1 155308000 . T . PASS END=155308000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:62:45:0,62,1531:0,62,255:40,1 chr1 155308001 . T . PASS END=155308181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:35:0,90,1350:0,96,255:40,0 chr1 155309119 . C . PASS END=155309159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,99,1637:0,99,255:40,0 chr1 155311727 . C . PASS END=155311729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155311730 . G . PASS END=155311730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 155311731 . A . PASS END=155311737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1001:0,84,255:28,0 chr1 155311738 . T . PASS END=155311738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 155311739 . T . PASS END=155311740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 155311741 . T . PASS END=155311741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 155311742 . G . PASS END=155311746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 155311747 . T . PASS END=155311748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 155311749 . A . PASS END=155311749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155311750 . G . PASS END=155311751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1039:0,71,255:28,0 chr1 155311752 . T . PASS END=155311763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,965:0,87,255:31,0 chr1 155311764 . T . PASS END=155311764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 155311765 . G . PASS END=155311782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,99,1336:0,100,255:37,0 chr1 155311783 . T . PASS END=155311783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 155311784 . G . PASS END=155311868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:34:0,95,1349:0,95,255:39,0 chr1 155311869 . T . PASS END=155311869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 155311870 . G . PASS END=155311889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:34,0 chr1 155311890 . C . PASS END=155311893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 155313105 . C . PASS END=155313106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr1 155313107 . T . PASS END=155313110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 155313111 . A . PASS END=155313111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1117:0,65,255:31,0 chr1 155313112 . A . PASS END=155313277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:92:32:0,92,1122:0,92,255:40,0 chr1 155313395 . T . PASS END=155313408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:28,0 chr1 155313409 . A . PASS END=155313409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 155313410 . A . PASS END=155313413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:29,0 chr1 155313414 . T . PASS END=155313414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:28,0 chr1 155313415 . C . PASS END=155313530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:29:0,81,1116:0,84,255:40,0 chr1 155313531 . C . PASS END=155313533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1108:0,77,255:26,0 chr1 155313974 . C . PASS END=155314036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:36:0,85,1131:0,85,255:40,0 chr1 155314037 . A . PASS END=155314037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:30,0 chr1 155314038 . G . PASS END=155314058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1294:0,89,255:32,0 chr1 155314059 . A . PASS END=155314059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 155314060 . A . PASS END=155314061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 155314062 . C . PASS END=155314064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1074:0,63,255:26,0 chr1 155315897 . T . PASS END=155315998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,101,1443:0,101,255:40,0 chr1 155316174 . C . PASS END=155316201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1148:0,83,255:33,0 chr1 155316202 . T . PASS END=155316202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 155316203 . C . PASS END=155316248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1103:0,87,255:30,0 chr1 155316249 . G . PASS END=155316259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1011:0,71,255:26,0 chr1 155316260 . C . PASS END=155316260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155317447 . C . PASS END=155317460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:36,0 chr1 155317461 . A . PASS END=155317461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr1 155317462 . C . PASS END=155317660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:36:0,103,1382:0,103,255:40,0 chr1 155317661 . T . PASS END=155317661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1285:0,75,255:36,0 chr1 155317662 . C . PASS END=155317682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,95,255:38,0 chr1 155317683 . G . PASS END=155317690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,77,255:25,0 chr1 155317691 . T . PASS END=155317691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:54:31:0,54,810:0,93,255:18,0 chr1 155317692 . A . PASS END=155317692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,900:0,83,255:20,0 chr1 155317693 . C . PASS END=155317693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr1 155317694 . T . PASS END=155317694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:19,0 chr1 155317695 . T . PASS END=155317695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 155319118 . C . PASS END=155319121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 155319122 . G . PASS END=155319228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1055:0,80,255:40,0 chr1 155319229 . C . PASS END=155319237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,87,255:26,0 chr1 155319238 . A . PASS END=155319245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 155319246 . C . PASS END=155319250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 155319333 . T . PASS END=155319360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1357:0,81,255:37,0 chr1 155319361 . G . PASS END=155319361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1230:0,62,255:32,0 chr1 155319362 . A . PASS END=155319384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1319:0,105,255:36,0 chr1 155319385 . A . PASS END=155319386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:36:0,75,1150:0,75,255:32,0 chr1 155319387 . T . PASS END=155319387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 155322497 . C . PASS END=155322526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,925:0,67,255:26,0 chr1 155322527 . C . PASS END=155322534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:29,0 chr1 155322535 . A . PASS END=155322535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 155322536 . T . PASS END=155322603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1141:0,83,255:38,0 chr1 155322604 . A . PASS END=155322604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:31,0 chr1 155322605 . C . PASS END=155322622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:34,0 chr1 155322623 . G . PASS END=155322624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 155322625 . G . PASS END=155322627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 155322628 . G . PASS END=155322642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:24,0 chr1 155322643 . A . PASS END=155322643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 155322644 . A . PASS END=155322649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,799:0,66,255:22,0 chr1 155324264 . C . PASS END=155324272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 155324273 . T . PASS END=155324273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:27,0 chr1 155324274 . A . PASS END=155324274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 155324275 . T . PASS END=155324275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 155324276 . T . PASS END=155324276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 155324277 . C . PASS END=155324277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 155324278 . C . PASS END=155324283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:30,0 chr1 155324284 . T . PASS END=155324284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,964:0,60,255:28,0 chr1 155324285 . C . PASS END=155324285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 155324286 . T . PASS END=155324286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:28,0 chr1 155324287 . C . PASS END=155324303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1172:0,83,255:38,0 chr1 155324304 . A . PASS END=155324304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1119:0,64,255:35,0 chr1 155324305 . C . PASS END=155324330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:97:38:0,97,1313:0,97,255:40,0 chr1 155324331 . A . PASS END=155324331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1308:0,70,255:34,0 chr1 155324332 . T . PASS END=155324409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1260:0,82,255:38,0 chr1 155324410 . A . PASS END=155324410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:27,0 chr1 155324411 . A . PASS END=155324414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155324415 . A . PASS END=155324415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 155324416 . A . PASS END=155324420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 155324421 . C . PASS END=155324421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 155327107 . C . PASS END=155327201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1093:0,87,255:40,0 chr1 155327376 . C . PASS END=155327405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,881:0,72,255:26,0 chr1 155327406 . C . PASS END=155327431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,927:0,81,255:29,0 chr1 155327432 . T . PASS END=155327432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 155327433 . G . PASS END=155327460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1195:0,89,255:36,0 chr1 155327461 . C . PASS END=155327461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:32,0 chr1 155327462 . T . PASS END=155327505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1133:0,82,255:33,0 chr1 155327506 . C . PASS END=155327514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 155327515 . T . PASS END=155327520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 155327521 . A . PASS END=155327521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 155327522 . A . PASS END=155327524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155327525 . C . PASS END=155327525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 155327526 . A . PASS END=155327526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155327527 . C . PASS END=155327529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 155327530 . T . PASS END=155327530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,909:0,45,255:25,0 chr1 155327531 . T . PASS END=155327531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 155327532 . A . PASS END=155327537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155327538 . T . PASS END=155327538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 155327539 . T . PASS END=155327539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:23,0 chr1 155327540 . G . PASS END=155327540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 155330092 . C . PASS END=155330192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,99,1485:0,100,255:40,0 chr1 155330193 . T . PASS END=155330195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,99,1485:0,141,255:34,0 chr1 155330196 . C . PASS END=155330200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:42:0,69,1035:0,110,255:25,0 chr1 155340295 . C . PASS END=155340410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:33:0,81,1215:0,92,255:40,0 chr1 155340411 . G . PASS END=155340414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:33:0,75,1125:0,99,255:26,0 chr1 155340415 . T . PASS END=155340424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:29,0 chr1 155340425 . G . PASS END=155340425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1065:0,62,255:27,0 chr1 155340426 . C . PASS END=155340432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:29,0 chr1 155340433 . A . PASS END=155340434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 155340435 . C . PASS END=155340441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 155340568 . C . PASS END=155340591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1316:0,92,255:36,0 chr1 155340592 . T . PASS END=155340592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 155340593 . C . PASS END=155340732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1255:0,86,255:40,0 chr1 155340733 . C . PASS END=155340756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,64,255:25,0 chr1 155340757 . C . PASS END=155340759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:19,0 chr1 155340760 . T . PASS END=155340760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:15,0 chr1 155340761 . C . PASS END=155340774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,668:0,47,255:19,0 chr1 155348072 . C . PASS END=155348180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:43:0,105,1643:0,105,255:40,0 chr1 155348294 . T . PASS END=155348339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:76:0,120,1800:0,179,255:40,0 chr1 155349834 . C . PASS END=155349922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:76:0,120,1800:0,197,255:40,0 chr1 155365250 . C . PASS END=155365258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:51:0,90,1704:0,90,255:40,0 chr1 155365259 . T . PASS END=155365259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,6:54:62:54:0,62,1572:0,62,255:40,0 chr1 155365260 . G . PASS END=155365267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:54:0,110,1800:0,110,255:40,0 chr1 155365268 . G . PASS END=155365268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:79:56:0,79,1742:0,79,255:40,0 chr1 155365269 . A . PASS END=155365307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:90:56:0,90,1800:0,90,255:40,0 chr1 155365308 . C . PASS END=155365308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:31:56:0,31,1457:0,31,255:40,0 chr1 155365309 . T . PASS END=155365312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:96:56:0,96,1706:0,96,255:40,0 chr1 155365313 . C . PASS END=155365313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:68:56:0,68,1489:0,68,255:40,0 chr1 155365314 . T . PASS END=155365316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:56:0,87,1711:0,87,255:40,0 chr1 155365317 . C . PASS END=155365317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:53:56:0,53,1453:0,53,255:40,0 chr1 155365318 . T . PASS END=155365344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:53:0,84,1442:0,84,255:40,0 chr1 155378160 . C . PASS END=155378193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:75:0,120,1800:0,209,255:40,0 chr1 155385535 . T . PASS END=155385536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 155385537 . T . PASS END=155385537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 155385538 . G . PASS END=155385539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 155385540 . A . PASS END=155385540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 155385541 . G . PASS END=155385549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr1 155385550 . A . PASS END=155385550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,499:0,37,255:17,0 chr1 155385551 . C . PASS END=155385552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 155385553 . T . PASS END=155385553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 155385554 . C . PASS END=155385554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 155385555 . A . PASS END=155385556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,790:0,50,255:23,0 chr1 155385557 . A . PASS END=155385564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,898:0,72,255:26,0 chr1 155385565 . C . PASS END=155385565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,999:0,81,255:27,0 chr1 155385566 . C . PASS END=155385567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155385568 . G . PASS END=155385573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 155385574 . T . PASS END=155385574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 155385575 . G . PASS END=155385579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1017:0,87,255:29,0 chr1 155385580 . T . PASS END=155385580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 155385581 . T . PASS END=155385581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 155385582 . C . PASS END=155385582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 155385583 . T . PASS END=155385585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 155385586 . T . PASS END=155385586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 155385587 . T . PASS END=155385589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr1 155385590 . G . PASS END=155385591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 155385592 . G . PASS END=155385592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 155385593 . G . PASS END=155385593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 155385594 . A . PASS END=155385612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1020:0,87,255:31,0 chr1 155385613 . C . PASS END=155385613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr1 155385614 . T . PASS END=155385614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 155385615 . T . PASS END=155385615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 155385616 . G . PASS END=155385623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 155385624 . A . PASS END=155385624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1002:0,79,255:29,0 chr1 155385625 . G . PASS END=155385628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1046:0,90,255:30,0 chr1 155385629 . G . PASS END=155385629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 155385630 . C . PASS END=155385631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155385632 . C . PASS END=155385632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 155385633 . A . PASS END=155385638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 155385639 . C . PASS END=155385639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 155385640 . A . PASS END=155385640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155385641 . A . PASS END=155385641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 155385642 . G . PASS END=155385644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155385645 . A . PASS END=155385659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:27:0,63,945:0,65,255:26,0 chr1 155385660 . A . PASS END=155385660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,914:0,34,255:19,0 chr1 155385661 . G . PASS END=155385667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 155385668 . C . PASS END=155385668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155385669 . T . PASS END=155385669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 155385670 . G . PASS END=155385670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155385671 . G . PASS END=155385672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 155385673 . G . PASS END=155385674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155385675 . T . PASS END=155385690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:19,0 chr1 155385691 . A . PASS END=155385704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:13:0,36,540:0,37,255:13,0 chr1 155385705 . T . PASS END=155385709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 155385710 . T . PASS END=155385714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr1 155408118 . C . PASS END=155408589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:89:36:0,89,1267:0,89,255:40,0 chr1 155408590 . A . PASS END=155408590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1156:0,39,255:32,0 chr1 155408591 . C . PASS END=155408597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1247:0,89,255:35,0 chr1 155408598 . G . PASS END=155408613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,96,255:34,0 chr1 155408614 . T . PASS END=155408614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 155408615 . A . PASS END=155408622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 155408623 . A . PASS END=155408623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 155408624 . A . PASS END=155408625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155408626 . A . PASS END=155408626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:26,0 chr1 155408627 . G . PASS END=155408634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 155408635 . T C, 131.26 PASS DP=29;MQ=250.00;FractionInformativeReads=0.966 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,13,0:0,15,0:81:169,84,0,269,269,269:255,87,0:0,0:1.3126e+02,8.1261e+01,0.0000e+00,2.6603e+02,3.0080e+02,2.6904e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,18:0,0,15,13 chr1 155408636 . G . PASS END=155408636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 155408637 . A . PASS END=155408637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:27,0 chr1 155408638 . C . PASS END=155408638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 155408639 . T . PASS END=155408640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 155408641 . C . PASS END=155408654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,1024:0,60,255:26,0 chr1 155408655 . C . PASS END=155408658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr1 155408659 . C . PASS END=155408659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 155408660 . T . PASS END=155408660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155408661 . G . PASS END=155408661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 155408662 . G . PASS END=155408672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1194:0,83,255:31,0 chr1 155408673 . G . PASS END=155408686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:31,0 chr1 155408687 . G . PASS END=155408690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 155408691 . C . PASS END=155408693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155408694 . C . PASS END=155408694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 155408695 . G . PASS END=155408739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1184:0,83,255:34,0 chr1 155408740 . C . PASS END=155408740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr1 155408741 . A . PASS END=155408834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1169:0,80,255:36,0 chr1 155408835 . G . PASS END=155408859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,902:0,64,255:25,0 chr1 155410290 . T . PASS END=155410384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:50:0,118,1800:0,118,255:40,0 chr1 155429588 . C . PASS END=155429689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:37:0,88,1399:0,88,255:40,0 chr1 155447677 . C . PASS END=155447693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:25,0 chr1 155447694 . G . PASS END=155447706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:28,0 chr1 155447707 . A . PASS END=155447707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:27,0 chr1 155447708 . A . PASS END=155447739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1070:0,84,255:35,0 chr1 155447740 . G . PASS END=155447740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 155447741 . T . PASS END=155447953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1228:0,86,255:40,0 chr1 155447954 . C . PASS END=155447954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:38,0 chr1 155447955 . A . PASS END=155448004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:39:0,84,1333:0,84,255:40,0 chr1 155448005 . T . PASS END=155448005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1505:0,61,255:39,0 chr1 155448006 . C . PASS END=155448014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:42:0,93,1389:0,93,255:40,0 chr1 155448015 . A . PASS END=155448015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1316:0,78,255:38,0 chr1 155448016 . A . PASS END=155448506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:41:0,82,1330:0,82,255:40,0 chr1 155448507 . G . PASS END=155448507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:62:47:0,62,1419:0,62,255:40,0 chr1 155448508 . G . PASS END=155448508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1360:0,58,255:40,0 chr1 155448509 . C . PASS END=155449047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:36:0,81,1324:0,81,255:40,0 chr1 155449048 . T . PASS END=155449048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1230:0,72,255:33,0 chr1 155449049 . T . PASS END=155449079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:35:0,84,1241:0,84,255:37,0 chr1 155449080 . T . PASS END=155449118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,925:0,62,255:26,0 chr1 155449119 . T . PASS END=155449122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr1 155449123 . G . PASS END=155449126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,955:0,67,255:29,0 chr1 155449127 . T . PASS END=155449127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr1 155449128 . G . PASS END=155449128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 155449129 . T . PASS END=155449139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1080:0,90,255:30,0 chr1 155449140 . A . PASS END=155449140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 155449141 . A . PASS END=155449150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1054:0,87,255:29,0 chr1 155449151 . A . PASS END=155449151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,928:0,37,255:26,0 chr1 155449152 . G . PASS END=155449153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 155449154 . A . PASS END=155449154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,996:0,59,255:29,0 chr1 155449155 . T . PASS END=155449157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155449158 . G . PASS END=155449158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 155449159 . G . PASS END=155449167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 155449168 . T . PASS END=155449168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 155449169 . A . PASS END=155449171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155449172 . A . PASS END=155449172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 155449173 . G . PASS END=155449187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:29,0 chr1 155449188 . C . PASS END=155449188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 155449189 . T . PASS END=155449189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155449190 . C . PASS END=155449192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1108:0,77,255:27,0 chr1 155449193 . C . PASS END=155449193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:28,0 chr1 155449194 . T . PASS END=155449195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,996:0,79,255:28,0 chr1 155449196 . T . PASS END=155449196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 155449197 . G . PASS END=155449197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 155449198 . A . PASS END=155449199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155449200 . G . PASS END=155449200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:27,0 chr1 155449201 . C . PASS END=155449204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:28,0 chr1 155449205 . C . PASS END=155449207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155449208 . C . PASS END=155449208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 155449209 . A . PASS END=155449210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 155449211 . T . PASS END=155449211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 155449212 . G . PASS END=155449220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 155449221 . T . PASS END=155449221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 155449222 . G . PASS END=155449280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1396:0,81,255:40,0 chr1 155449281 . A . PASS END=155449281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 155449282 . A . PASS END=155449289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:41:0,84,1397:0,84,255:40,0 chr1 155449290 . T . PASS END=155449290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:39,0 chr1 155449291 . C . PASS END=155449875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:87:37:0,87,1305:0,93,255:40,0 chr1 155449876 . G . PASS END=155449876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:30,0 chr1 155449877 . G . PASS END=155449912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1113:0,80,255:33,0 chr1 155449913 . A . PASS END=155449913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 155449914 . G . PASS END=155449914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155449915 . T . PASS END=155449915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 155449916 . G . PASS END=155449917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155449918 . C . PASS END=155449918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 155449919 . A . PASS END=155449919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155449920 . A . PASS END=155449923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 155449924 . A . PASS END=155449926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:27,0 chr1 155449927 . G . PASS END=155449928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 155449929 . G . PASS END=155449929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,82,255:26,0 chr1 155449930 . C . PASS END=155449938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:30:0,69,1035:0,79,255:26,0 chr1 155449939 . G . PASS END=155449956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:31,0 chr1 155449957 . T . PASS END=155449957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:33,0 chr1 155449958 . G . PASS END=155449987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1205:0,88,255:35,0 chr1 155449988 . G . PASS END=155449988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1251:0,59,255:33,0 chr1 155449989 . C . PASS END=155450001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:36:0,80,1213:0,80,255:37,0 chr1 155450002 . G . PASS END=155450002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:37,2 chr1 155450003 . A . PASS END=155450003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1327:0,48,255:37,2 chr1 155450004 . A . PASS END=155450004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:39,0 chr1 155450005 . A . PASS END=155450195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:34:0,89,1266:0,89,255:40,0 chr1 155450196 . T . PASS END=155450196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:34,0 chr1 155450197 . C . PASS END=155450216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1350:0,100,255:39,0 chr1 155450217 . A . PASS END=155450217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1357:0,70,255:31,0 chr1 155450218 . C . PASS END=155450234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1260:0,96,255:36,0 chr1 155450235 . A . PASS END=155450235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 155450236 . G . PASS END=155450264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1014:0,80,255:34,0 chr1 155450265 . G . PASS END=155450265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:33,0 chr1 155450266 . G . PASS END=155450360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:30:0,81,1205:0,88,255:40,0 chr1 155450361 . G . PASS END=155450362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 155450363 . G . PASS END=155450363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155450364 . G . PASS END=155450364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,907:0,73,255:26,0 chr1 155450365 . G . PASS END=155450365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,876:0,40,255:24,0 chr1 155450366 . T . PASS END=155450373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 155450374 . T . PASS END=155450397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,945:0,62,255:26,0 chr1 155450398 . A . PASS END=155450399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155450400 . T . PASS END=155450400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 155450401 . T . PASS END=155450404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155450405 . A . PASS END=155450405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 155450406 . T . PASS END=155450407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155450408 . T . PASS END=155450414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 155450415 . G . PASS END=155450416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155450417 . G . PASS END=155450447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,858:0,62,255:25,0 chr1 155450448 . C . PASS END=155450448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:22,0 chr1 155450449 . T . PASS END=155450451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,894:0,64,255:25,0 chr1 155450452 . C . PASS END=155450452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155450453 . T . PASS END=155450453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:25,0 chr1 155450454 . A . PASS END=155450454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:23,0 chr1 155450455 . A . PASS END=155450472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,978:0,67,255:26,0 chr1 155450473 . A . PASS END=155450473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155450474 . C . PASS END=155450474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr1 155450475 . C . PASS END=155450476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 155450477 . G . PASS END=155450477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 155450478 . C . PASS END=155450489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:30,0 chr1 155450490 . G . PASS END=155450490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:29,0 chr1 155450491 . C . PASS END=155450501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1233:0,86,255:35,0 chr1 155450502 . G . PASS END=155450502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:34,0 chr1 155450503 . T . PASS END=155450518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1244:0,94,255:35,0 chr1 155450519 . T . PASS END=155450519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:32,0 chr1 155450520 . C . PASS END=155450525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1283:0,100,255:36,0 chr1 155450526 . C . PASS END=155450527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1250:0,40,255:38,2 chr1 155450528 . T . PASS END=155450537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:38:0,96,1440:0,101,255:37,0 chr1 155450538 . G . PASS END=155450538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1307:0,73,255:31,0 chr1 155450539 . G . PASS END=155451098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1155:0,81,255:40,0 chr1 155451099 . T . PASS END=155451099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1574:0,77,255:40,0 chr1 155451100 . T . PASS END=155451195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:40:0,87,1276:0,87,255:40,0 chr1 155451196 . T . PASS END=155451196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:40:40:0,40,1231:0,40,255:36,0 chr1 155451197 . A . PASS END=155451203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1366:0,103,255:40,0 chr1 155451204 . T . PASS END=155451204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1267:0,67,255:37,0 chr1 155451205 . C . PASS END=155451258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:94:42:0,94,1485:0,94,255:40,0 chr1 155451259 . T . PASS END=155451259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1341:0,73,255:37,0 chr1 155451260 . C . PASS END=155452210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1215:0,80,255:40,0 chr1 155452211 . A . PASS END=155452223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 155452224 . T . PASS END=155452224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:19,0 chr1 155452225 . A . PASS END=155452240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 155490891 . T . PASS END=155490904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:38,0 chr1 155490905 . A . PASS END=155490905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:37,0 chr1 155490906 . G . PASS END=155491310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1210:0,85,255:40,0 chr1 155580040 . A . PASS END=155580043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 155580044 . C . PASS END=155580044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 155580045 . G . PASS END=155580056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155580057 . G . PASS END=155580057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155580058 . G . PASS END=155580068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 155580069 . A . PASS END=155580069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 155580070 . C . PASS END=155580072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 155580073 . C . PASS END=155580073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 155580074 . A . PASS END=155580080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,459:0,36,255:13,0 chr1 155580081 . A . PASS END=155580087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 155580088 . G . PASS END=155580089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 155580090 . C . PASS END=155580090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 155580091 . G . PASS END=155580103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr1 155580104 . C . PASS END=155580104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 155580105 . G . PASS END=155580106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 155580107 . A . PASS END=155580112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 155580113 . G . LowGQ END=155580113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:8,0 chr1 155580114 . G . PASS END=155580123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr1 155580216 . G . PASS END=155580216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155580217 . A . PASS END=155580217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 155580218 . T . PASS END=155580221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 155580222 . G . PASS END=155580262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 155580263 . G . PASS END=155580273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 155580274 . A . PASS END=155580311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 155580312 . G . PASS END=155580340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 155580341 . G . LowGQ END=155580341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,255:12,0,255:7,0 chr1 155580342 . G . PASS END=155580351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 155580830 . G . PASS END=155580841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 155580842 . C . PASS END=155580863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 155580864 . C . PASS END=155580884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,197:0,21,197:9,0 chr1 155580885 . T . PASS END=155580885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 155580886 . G . PASS END=155580887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 155580888 . T . PASS END=155580888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 155580889 . G . PASS END=155580892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 155580893 . T . PASS END=155580893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 155580894 . A . PASS END=155580899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,238:8,0 chr1 155581007 . G . PASS END=155581007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 155581008 . C . PASS END=155581013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 155581014 . A . PASS END=155581059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1020:0,87,255:37,0 chr1 155581060 . T . PASS END=155581060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1294:0,56,255:34,0 chr1 155581061 . C . PASS END=155581082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1266:0,81,255:38,0 chr1 155581218 . G . PASS END=155581224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 155581225 . A . PASS END=155581225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 155581226 . C . PASS END=155581226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 155581227 . T . PASS END=155581227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 155581228 . C . PASS END=155581233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1061:0,71,255:26,0 chr1 155581234 . A . PASS END=155581236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:27,0 chr1 155581237 . G . PASS END=155581317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1216:0,83,255:40,0 chr1 155581318 . C . PASS END=155581318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:38,0 chr1 155581319 . G . PASS END=155581344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:36:0,82,1427:0,82,255:40,0 chr1 155581345 . G . PASS END=155581345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr1 155581346 . C . PASS END=155581372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,92,255:34,0 chr1 155581373 . A . PASS END=155581390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:64:27:0,64,947:0,64,255:25,0 chr1 155581391 . A . PASS END=155581394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:19,0 chr1 155581480 . G . PASS END=155581484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 155581485 . T . PASS END=155581487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 155581488 . C . PASS END=155581488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 155581489 . C . PASS END=155581489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 155581490 . A . LowGQ END=155581490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,204:4,0 chr1 155581491 . C . PASS END=155581503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,172:5,0 chr1 155581504 . C . LowGQ END=155581521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,90:0,0,64:3,0 chr1 155581522 . T . PASS END=155581523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr1 155581524 . C . LowGQ END=155581524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:4,0 chr1 155581525 . C . PASS END=155581534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:4,0 chr1 155581535 . C . PASS END=155581585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,64:0,9,64:3,0 chr1 155581586 . C . PASS END=155581627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:6,0 chr1 155581628 . C . PASS END=155581638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr1 155581639 . T . PASS END=155581639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr1 155581640 . T . PASS END=155581643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 155581757 . A G, 85.04 PASS DP=17;MQ=30.85;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,6,0:0,11,0:48:123,51,0,630,51,630:255,51,0:0,0:8.5041e+01,4.7708e+01,7.3517e-05,4.5000e+02,8.2478e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,0:0,0,6,11 chr1 155581758 . T . PASS END=155581766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 155581767 . G . PASS END=155581767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 155581768 . T . PASS END=155581774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 155581775 . G . PASS END=155581775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 155581776 . A . PASS END=155581794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,649:0,41,255:19,0 chr1 155581795 . T . PASS END=155581799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 155581800 . G . PASS END=155581813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 155581814 . G . PASS END=155581814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 155581815 . T . PASS END=155581819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,771:0,72,255:26,0 chr1 155581820 . A . PASS END=155581859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,950:0,83,255:33,0 chr1 155581860 . A . PASS END=155581860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:29,0 chr1 155581861 . T . PASS END=155581891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1117:0,80,255:34,0 chr1 155581973 . G . PASS END=155581973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 155581974 . G . PASS END=155581995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 155581996 . G . PASS END=155581998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155581999 . C . PASS END=155582006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 155582007 . T . PASS END=155582013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 155582014 . G . PASS END=155582014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:27,0 chr1 155582015 . G . PASS END=155582015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155582016 . T . PASS END=155582065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,931:0,62,255:26,0 chr1 155582066 . A . PASS END=155582066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,922:0,34,255:20,0 chr1 155582067 . T . PASS END=155582078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,64,255:23,0 chr1 155582079 . G . PASS END=155582079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 155582080 . C . PASS END=155582082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 155582083 . G . PASS END=155582083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155582084 . C . PASS END=155582107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,870:0,63,255:25,0 chr1 155582209 . G . PASS END=155582215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,753:0,49,255:19,0 chr1 155582216 . A . PASS END=155582216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 155582217 . G . PASS END=155582217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155582218 . A . PASS END=155582218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,737:0,22,255:19,0 chr1 155582219 . G . PASS END=155582223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,713:0,47,255:20,0 chr1 155582224 . A . PASS END=155582224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:19,0 chr1 155582225 . T . PASS END=155582225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 155582226 . C . PASS END=155582226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155582227 . T . PASS END=155582233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 155582234 . T . PASS END=155582234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,621:0,30,255:16,0 chr1 155582235 . A . PASS END=155582244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:40:19:0,40,592:0,40,255:17,0 chr1 155582245 . G . PASS END=155582251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 155582252 . G . PASS END=155582252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155582253 . T . PASS END=155582256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155582257 . G . PASS END=155582260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155582261 . A . PASS END=155582288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,880:0,62,255:26,0 chr1 155582289 . C . PASS END=155582296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 155582297 . C . PASS END=155582297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 155582298 . C . PASS END=155582300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 155582301 . G . PASS END=155582359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,892:0,61,255:26,0 chr1 155582360 . A . PASS END=155582361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,815:0,55,255:22,0 chr1 155582362 . G . PASS END=155582362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155582635 . G . PASS END=155582656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:19,0 chr1 155582657 . G . PASS END=155582669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:24,0 chr1 155582670 . T . PASS END=155582670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 155582671 . A . PASS END=155582677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1008:0,75,255:26,0 chr1 155582678 . T . PASS END=155582691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:30,0 chr1 155582692 . G . PASS END=155582692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 155582693 . T . PASS END=155582735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1041:0,80,255:31,0 chr1 155582736 . G . PASS END=155582736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 155582737 . G . PASS END=155582739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 155582740 . G . PASS END=155582740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 155582741 . A . PASS END=155582750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 155582751 . C . PASS END=155582761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 155582762 . A . PASS END=155582762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155582763 . A . PASS END=155582766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 155582840 . G . PASS END=155582841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 155582842 . G . PASS END=155582845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 155582846 . A . PASS END=155582846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:18,0 chr1 155582847 . C . PASS END=155582854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155582855 . G . PASS END=155582855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 155582856 . C . PASS END=155582860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 155582861 . A . PASS END=155582861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr1 155582862 . T . PASS END=155582863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155582864 . C . PASS END=155582864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 155582865 . C . PASS END=155582872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155582873 . T . PASS END=155582873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155582874 . T . PASS END=155582886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,754:0,63,255:26,0 chr1 155582887 . G . PASS END=155582887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 155582888 . T . PASS END=155582888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 155582889 . C . PASS END=155582908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 155582909 . C . PASS END=155582910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,990:0,68,255:26,0 chr1 155582911 . G . PASS END=155582911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155582912 . T . PASS END=155582912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,891:0,73,255:27,0 chr1 155582913 . T . PASS END=155582914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155582915 . G . PASS END=155582915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 155582916 . G . PASS END=155582938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1041:0,84,255:30,0 chr1 155582939 . C . PASS END=155582941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1119:0,79,255:26,0 chr1 155582942 . T . PASS END=155582943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 155582944 . T . PASS END=155582944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr1 155582945 . G . PASS END=155582952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 155582953 . G . PASS END=155582953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 155582954 . G . PASS END=155582954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155582955 . A . PASS END=155582955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 155582956 . G . PASS END=155582965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1258:0,90,255:35,0 chr1 155582966 . A . PASS END=155582966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 155582967 . C . PASS END=155583016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1210:0,86,255:35,0 chr1 155583017 . C . PASS END=155583024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 155583216 . C . PASS END=155583328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:34:0,81,1215:0,85,255:40,0 chr1 155583329 . T . PASS END=155583329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 155583330 . T . PASS END=155583332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,92,255:27,0 chr1 155583333 . A . PASS END=155583345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr1 155583346 . T . PASS END=155583357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,720:0,47,255:19,0 chr1 155583448 . T . PASS END=155583448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:9,0 chr1 155583449 . T . PASS END=155583464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:10,0 chr1 155583465 . T . PASS END=155583468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155583469 . T . LowGQ END=155583471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,288:6,0,255:9,0 chr1 155583472 . C . PASS END=155583472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 155583473 . T . PASS END=155583473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:10,0 chr1 155583474 . G . LowGQ END=155583476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:13:0,0,404:0,0,255:10,0 chr1 155583477 . G . PASS END=155583491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 155583492 . A . PASS END=155583493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 155583494 . C . PASS END=155583494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 155583495 . C . PASS END=155583497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 155583498 . A . PASS END=155583498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr1 155583499 . C . PASS END=155583499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 155583500 . C . PASS END=155583500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155583501 . T . PASS END=155583501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 155583502 . C . PASS END=155583502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 155583503 . T . PASS END=155583507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:17,0 chr1 155583508 . A . PASS END=155583508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:15,0 chr1 155583509 . A . PASS END=155583516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:18,0 chr1 155583517 . T . PASS END=155583517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 155583518 . C . PASS END=155583519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 155583520 . A . PASS END=155583520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 155583521 . C . PASS END=155583523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 155583524 . G . PASS END=155583524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 155583525 . G . PASS END=155583525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 155583526 . T . PASS END=155583526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155583527 . A . PASS END=155583528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 155583529 . G . PASS END=155583531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155583532 . T . PASS END=155583532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 155583533 . C . PASS END=155583536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155583537 . A . PASS END=155583537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 155583538 . T . PASS END=155583541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 155583542 . T . PASS END=155583542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:14,0 chr1 155583543 . C . PASS END=155583550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 155583551 . G . PASS END=155583551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr1 155583552 . G . PASS END=155583553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 155583554 . G . PASS END=155583554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 155583555 . C . PASS END=155583565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 155583825 . G . PASS END=155583825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 155583826 . T . PASS END=155583826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,952:0,68,255:27,0 chr1 155583827 . C . PASS END=155583827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 155583828 . T . PASS END=155583828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 155583829 . C . PASS END=155583832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 155583833 . T . PASS END=155583854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 155583855 . G . PASS END=155583858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,791:0,55,255:19,0 chr1 155583859 . G . PASS END=155583877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,771:0,69,255:23,0 chr1 155583878 . A . PASS END=155583890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:17:0,45,675:0,51,255:17,0 chr1 155583891 . T . PASS END=155583895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 155583896 . C . PASS END=155583912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 155583913 . A . PASS END=155583915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 155583916 . C . PASS END=155583919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 155583920 . G . PASS END=155583974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 155583975 . G . PASS END=155584064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 155629448 . T . PASS END=155629452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 155629453 . G . PASS END=155629453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 155629454 . A . PASS END=155629454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155629455 . A . PASS END=155629455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 155629456 . A . PASS END=155629461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,652:0,54,255:18,0 chr1 155629462 . T . PASS END=155629462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 155629463 . G . PASS END=155629479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr1 155629480 . C . PASS END=155629495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 155629496 . G . PASS END=155629498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,767:0,50,255:19,0 chr1 155629499 . A . PASS END=155629499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:18,0 chr1 155629500 . A . PASS END=155629504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 155629505 . C . PASS END=155629508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 155629509 . A . PASS END=155629509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 155629510 . A . PASS END=155629513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155629514 . C . PASS END=155629517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr1 155629518 . G . PASS END=155629534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 155629535 . A . PASS END=155629535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 155629536 . G . PASS END=155629536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155629537 . A . PASS END=155629537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:20,0 chr1 155629538 . C . PASS END=155629541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155629542 . T . PASS END=155629542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 155629543 . G . PASS END=155629544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 155629545 . A . PASS END=155629545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 155629546 . T . PASS END=155629547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 155629548 . C . PASS END=155629550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155629551 . T . PASS END=155629553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 155629554 . G . PASS END=155629561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1145:0,80,255:30,0 chr1 155629562 . C . PASS END=155629563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1092:0,63,255:27,0 chr1 155629564 . C . PASS END=155629567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 155629568 . A . PASS END=155629574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,1045:0,63,255:26,0 chr1 155629575 . C . PASS END=155629576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:25,0 chr1 155629577 . T . PASS END=155629590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,886:0,64,255:26,0 chr1 155629591 . T . PASS END=155629592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155629593 . A . PASS END=155629593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 155629594 . C . PASS END=155629596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 155629597 . C . PASS END=155629597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 155629598 . G . PASS END=155629601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,978:0,81,255:31,0 chr1 155629602 . C . PASS END=155629602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 155629603 . A . PASS END=155629604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 155629605 . C . PASS END=155629605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 155629606 . G . PASS END=155629611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1082:0,93,255:33,0 chr1 155629612 . C . PASS END=155629613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1113:0,60,255:32,0 chr1 155629614 . C . PASS END=155629619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1186:0,83,255:34,0 chr1 155629620 . T . PASS END=155629620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:32,0 chr1 155629621 . C . PASS END=155629627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1327:0,98,255:36,0 chr1 155629628 . T . PASS END=155629628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1184:0,58,255:33,0 chr1 155629629 . C . PASS END=155629644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1146:0,91,255:37,0 chr1 155629645 . T . PASS END=155629645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:37,0 chr1 155629646 . A . PASS END=155629646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 155629647 . T . PASS END=155629647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:36,0 chr1 155629648 . C . PASS END=155629652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:37,0 chr1 155629653 . G . PASS END=155629653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:34,0 chr1 155629654 . G . PASS END=155629675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,102,1496:0,107,255:40,0 chr1 155629676 . C . PASS END=155629676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1457:0,76,255:37,0 chr1 155629677 . A . PASS END=155629793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1365:0,84,255:40,0 chr1 155629794 . T . PASS END=155629794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:30,0 chr1 155629795 . G . PASS END=155629801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1189:0,88,255:33,0 chr1 155629802 . A . PASS END=155629802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:31,0 chr1 155629803 . T . PASS END=155629805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1388:0,98,255:35,0 chr1 155629806 . T . PASS END=155629806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr1 155629807 . C . PASS END=155629829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1305:0,93,255:36,0 chr1 155629830 . T . PASS END=155629830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:32,0 chr1 155629831 . T . PASS END=155629834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1271:0,89,255:35,0 chr1 155629835 . A . PASS END=155629835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr1 155629836 . G . PASS END=155629975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1264:0,87,255:40,0 chr1 155629976 . C . PASS END=155629977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:36:0,77,1257:0,77,255:34,0 chr1 155629978 . G . PASS END=155629992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1302:0,92,255:37,0 chr1 155629993 . C . PASS END=155629993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:34,0 chr1 155629994 . A . PASS END=155630021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1297:0,87,255:36,0 chr1 155630022 . G . PASS END=155630022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:31,0 chr1 155630023 . T . PASS END=155630032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1147:0,80,255:31,0 chr1 155630033 . A . PASS END=155630033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:29,0 chr1 155630034 . G . PASS END=155630044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1201:0,86,255:30,0 chr1 155630045 . A . PASS END=155630045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 155630046 . G . PASS END=155630058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1186:0,83,255:31,0 chr1 155630059 . T . PASS END=155630059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1061:0,49,255:28,0 chr1 155630060 . A . PASS END=155630066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1127:0,82,255:31,0 chr1 155630067 . G . PASS END=155630067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 155630068 . C . PASS END=155630069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 155630070 . G . PASS END=155630070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:29,0 chr1 155630071 . G . PASS END=155630072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 155630073 . T . PASS END=155630073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1148:0,75,255:31,0 chr1 155630074 . T . PASS END=155630079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1264:0,92,255:33,0 chr1 155630080 . A . PASS END=155630080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 155630081 . G . PASS END=155630106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1166:0,85,255:34,0 chr1 155630107 . T . PASS END=155630107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr1 155630108 . T . PASS END=155630145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1233:0,89,255:39,0 chr1 155630146 . A . PASS END=155630147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1270:0,67,255:34,0 chr1 155630148 . G . PASS END=155630157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:39:0,101,1388:0,101,255:40,0 chr1 155630158 . A . PASS END=155630158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1471:0,57,255:38,0 chr1 155630159 . G . PASS END=155630724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:37:0,81,1346:0,81,255:40,0 chr1 155631020 . T . PASS END=155631214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:96:40:0,96,1361:0,96,255:40,0 chr1 155638418 . T . PASS END=155638568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:29:0,87,975:0,87,255:40,0 chr1 155640111 . T . PASS END=155640134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,760:0,63,255:25,0 chr1 155640135 . A . PASS END=155640201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1227:0,86,255:38,0 chr1 155640202 . T . PASS END=155640202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr1 155640203 . G . PASS END=155640227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1260:0,90,255:38,0 chr1 155640228 . T . PASS END=155640228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 155640229 . G . PASS END=155640235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1092:0,87,255:29,0 chr1 155640236 . C . PASS END=155640236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155640237 . A . PASS END=155640237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155640238 . A . PASS END=155640246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 155640247 . A . PASS END=155640251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 155640252 . T . PASS END=155640252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,849:0,67,255:26,0 chr1 155640253 . T . PASS END=155640253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155640254 . G . PASS END=155640255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155642351 . C . PASS END=155642351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:15,0 chr1 155642352 . A . PASS END=155642362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 155642363 . C . PASS END=155642363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 155642364 . A . PASS END=155642364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 155642365 . G . PASS END=155642365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 155642366 . T . PASS END=155642383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,537:0,48,255:16,0 chr1 155642384 . C . PASS END=155642384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 155642385 . A . PASS END=155642420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:20,0 chr1 155642421 . C . PASS END=155642437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,825:0,66,255:24,0 chr1 155642438 . T . PASS END=155642438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 155642439 . A . PASS END=155642440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 155642441 . A . PASS END=155642442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:22,0 chr1 155642443 . G . PASS END=155642447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:25,0 chr1 155642448 . G . PASS END=155642452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 155642453 . G . PASS END=155642458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 155642459 . G . PASS END=155642459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:24,0 chr1 155642460 . A . PASS END=155642466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,886:0,75,255:25,0 chr1 155642467 . G . PASS END=155642467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 155642468 . G . PASS END=155642499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 155642500 . T . PASS END=155642500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 155642501 . G . PASS END=155642506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr1 155642507 . A . PASS END=155642507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 155642508 . G . PASS END=155642523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,893:0,75,255:25,0 chr1 155644801 . A . PASS END=155644804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:30,0 chr1 155644805 . C . PASS END=155644805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 155644806 . A . PASS END=155644806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 155644807 . T . PASS END=155644807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 155644808 . A . PASS END=155644887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:31:0,83,1166:0,83,255:40,0 chr1 155646339 . C . PASS END=155646357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr1 155646358 . A . PASS END=155646359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 155646360 . T . PASS END=155646360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:26,0 chr1 155646361 . C . PASS END=155646364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 155646365 . T . PASS END=155646365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:27,0 chr1 155646366 . C . PASS END=155646366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 155646367 . C . PASS END=155646367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:19:32:0,19,1033:0,19,255:28,0 chr1 155646368 . T . PASS END=155646516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:32:0,86,1210:0,86,255:40,0 chr1 155646517 . T . PASS END=155646537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,90,255:26,0 chr1 155649083 . T . PASS END=155649104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,177,255:40,0 chr1 155649200 . C . PASS END=155649303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:57:0,120,1800:0,154,255:40,0 chr1 155650207 . A . PASS END=155650247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:83:0,120,1800:0,246,255:40,0 chr1 155657862 . C . PASS END=155657885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 155657886 . G . PASS END=155657895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 155657896 . A . PASS END=155657899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 155657900 . G . PASS END=155657911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr1 155657912 . G . PASS END=155657912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 155657913 . T . PASS END=155657913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 155657914 . G . PASS END=155657914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155657915 . G . PASS END=155657959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,531:0,48,255:17,0 chr1 155657960 . C . PASS END=155657964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 155657965 . G . PASS END=155658009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:16:0,43,590:0,43,255:19,0 chr1 155658010 . G . PASS END=155658010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 155658011 . A . PASS END=155658011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:20,0 chr1 155658012 . G . PASS END=155658013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 155658014 . A . PASS END=155658016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 155658017 . A . PASS END=155658019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 155658020 . G . PASS END=155658021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 155658022 . A . PASS END=155658022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 155658023 . A . PASS END=155658023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,742:0,58,255:22,0 chr1 155658024 . G . PASS END=155658025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 155658026 . T . PASS END=155658026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 155658027 . G . PASS END=155658028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155658029 . A . PASS END=155658029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 155658030 . G . PASS END=155658032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 155658033 . C . PASS END=155658034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 155658035 . A . PASS END=155658035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 155658036 . A . PASS END=155658036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 155658037 . A . PASS END=155658042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 155658043 . A . PASS END=155658043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 155658044 . A . PASS END=155658049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 155658050 . G . PASS END=155658053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,775:0,50,255:19,0 chr1 155658054 . A . PASS END=155658054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:17,0 chr1 155658055 . G . PASS END=155658055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155658056 . G . PASS END=155658101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,595:0,40,255:19,0 chr1 155658102 . A . PASS END=155658102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 155658103 . C . PASS END=155658109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr1 155658110 . T . PASS END=155658110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 155658111 . G . PASS END=155658138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 155658139 . C . PASS END=155658139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 155658140 . C . PASS END=155658143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 155658144 . G . PASS END=155658153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:13,0 chr1 155658154 . C . PASS END=155658172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 155658173 . G . PASS END=155658173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 155658174 . C . PASS END=155658188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 155658189 . C . PASS END=155658191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 155658192 . A . PASS END=155658236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr1 155658237 . T . PASS END=155658237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 155658238 . T . PASS END=155658255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 155658721 . C . PASS END=155658724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 155658725 . C . PASS END=155658726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 155658727 . G . PASS END=155658730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155658731 . T . PASS END=155658731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 155658732 . C . PASS END=155658733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155658734 . T . PASS END=155658734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 155658735 . C . PASS END=155658746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 155658747 . G . PASS END=155658759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:25,0 chr1 155658760 . T . PASS END=155658767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:24:0,45,675:0,72,255:17,0 chr1 155679571 . A . PASS END=155679595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:64:0,120,1800:0,135,255:40,0 chr1 155679596 . T . PASS END=155679615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,131,255:40,0 chr1 155686797 . T . PASS END=155686919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:82:40:0,82,1413:0,82,255:40,0 chr1 155691308 . G . PASS END=155691319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,778:0,66,255:26,0 chr1 155691320 . G . PASS END=155691320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155691321 . A . PASS END=155691324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 155691325 . G . PASS END=155691471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:31:0,80,1153:0,80,255:40,0 chr1 155691472 . G . PASS END=155691481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:32:0,60,900:0,79,255:22,0 chr1 155695173 . G . PASS END=155695281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:58:0,120,1800:0,146,255:40,0 chr1 155695718 . A . PASS END=155695807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,117,1637:0,119,255:40,0 chr1 155695808 . A . PASS END=155695808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1488:0,72,255:33,0 chr1 155695809 . T . PASS END=155695810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,99,1601:0,99,255:37,0 chr1 155697399 . C . PASS END=155697399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 155697400 . T . PASS END=155697400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 155697401 . C . PASS END=155697529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:32:0,80,1158:0,80,255:40,0 chr1 155698833 . A . PASS END=155698913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1215:0,91,255:40,0 chr1 155698999 . G . PASS END=155698999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 155699000 . G . PASS END=155699014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 155699015 . G . PASS END=155699015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 155699016 . G . PASS END=155699017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155699018 . A . PASS END=155699028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,74,255:24,0 chr1 155699029 . G . PASS END=155699030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 155699031 . A . PASS END=155699031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 155699032 . G . PASS END=155699034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,851:0,81,255:27,0 chr1 155699035 . G . PASS END=155699035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 155699036 . G . PASS END=155699036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 155699037 . A . PASS END=155699037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 155699038 . A . PASS END=155699038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 155699039 . T . PASS END=155699049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr1 155699050 . G . PASS END=155699068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,987:0,84,255:28,0 chr1 155699069 . C . PASS END=155699121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:26,0 chr1 155699122 . G . PASS END=155699144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:19,0 chr1 155699145 . A . PASS END=155699146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,635:0,18,255:16,0 chr1 155699147 . A . PASS END=155699147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 155699148 . T . PASS END=155699157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 155701147 . A . PASS END=155701206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,187,255:40,0 chr1 155701735 . C . PASS END=155701743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,842:0,75,255:25,0 chr1 155701744 . G . PASS END=155701744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 155701745 . C . PASS END=155701750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 155701751 . T . PASS END=155701751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 155701752 . G . PASS END=155701762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,68,255:25,0 chr1 155701763 . G . PASS END=155701763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 155701764 . C . PASS END=155701768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,937:0,65,255:26,0 chr1 155701769 . C . PASS END=155701774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155701775 . C . PASS END=155701801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:26,0 chr1 155701802 . T . PASS END=155701803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 155701804 . C . PASS END=155701806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 155701807 . C . PASS END=155701824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 155706399 . G . PASS END=155706417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:9,0 chr1 155706418 . G . PASS END=155706418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:8,0 chr1 155706419 . G . PASS END=155706422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 155706423 . G . PASS END=155706437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 155706438 . G . PASS END=155706438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 155706439 . C . PASS END=155706443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 155706444 . G . PASS END=155706444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155706445 . C . PASS END=155706448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155706449 . A . PASS END=155706449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 155706450 . T . PASS END=155706455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155706456 . T . PASS END=155706456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 155706457 . C . PASS END=155706458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 155706459 . C . PASS END=155706460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155706461 . G . PASS END=155706463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155706464 . T . PASS END=155706470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 155706471 . G . PASS END=155706472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 155706473 . G . PASS END=155706485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 155706737 . G . PASS END=155706854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:43:0,111,1710:0,111,255:40,0 chr1 155707948 . C . PASS END=155708002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1263:0,89,255:37,0 chr1 155708003 . G . PASS END=155708003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 155708004 . C . PASS END=155708005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 155708006 . G . PASS END=155708006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 155708007 . C . PASS END=155708033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1296:0,92,255:36,0 chr1 155720375 . T . PASS END=155720387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,906:0,72,255:24,0 chr1 155720388 . T . PASS END=155720388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:20,0 chr1 155720389 . C . PASS END=155720414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,923:0,72,255:26,0 chr1 155720415 . T . PASS END=155720423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:28,0 chr1 155720424 . T . PASS END=155720424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 155720425 . G . PASS END=155720428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155720429 . T . PASS END=155720429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155720430 . G . PASS END=155720435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 155720436 . C . PASS END=155720436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 155720437 . T . PASS END=155720445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1142:0,93,255:32,0 chr1 155720446 . T . PASS END=155720453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:32:0,75,1125:0,96,255:26,0 chr1 155720454 . T . PASS END=155720483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1166:0,80,255:33,0 chr1 155720484 . G . PASS END=155720484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:27,0 chr1 155720485 . T . PASS END=155720485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:26,0 chr1 155720486 . G . PASS END=155720492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,86,255:28,0 chr1 155720493 . A . PASS END=155720502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:27,0 chr1 155720503 . G . PASS END=155720503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:24,0 chr1 155720504 . T . PASS END=155720507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,854:0,64,255:26,0 chr1 155720508 . C . PASS END=155720508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,900:0,34,255:25,0 chr1 155720509 . G . PASS END=155720509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 155720510 . A . PASS END=155720510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 155720511 . A . PASS END=155720511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 155720512 . A . PASS END=155720512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 155720513 . A . PASS END=155720514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 155720515 . G . PASS END=155720521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr1 155720522 . A . PASS END=155720524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:23,0 chr1 155721558 . C . PASS END=155721660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1242:0,89,255:40,0 chr1 155721751 . C . PASS END=155722043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:33:0,90,1344:0,92,255:40,1 chr1 155722044 . T . PASS END=155722044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:29,0 chr1 155722045 . C . PASS END=155722045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 155722046 . T . PASS END=155722046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 155722047 . G . PASS END=155722052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155722053 . T . PASS END=155722084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr1 155722085 . G . PASS END=155722086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:19,0 chr1 155722087 . T . PASS END=155722091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:20,0 chr1 155722092 . G . PASS END=155722095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:22,0 chr1 155722096 . C . PASS END=155722104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:26,0 chr1 155722105 . T . PASS END=155722113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,899:0,81,255:30,0 chr1 155722114 . T . PASS END=155722114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1002:0,24,255:28,0 chr1 155722115 . C . PASS END=155722121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 155722122 . A . PASS END=155722122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 155722123 . T . PASS END=155722136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 155722137 . C . PASS END=155722153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:23:0,69,892:0,69,255:26,0 chr1 155722154 . T . PASS END=155722154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 155722155 . C . PASS END=155722163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 155722164 . T . PASS END=155722164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:22,0 chr1 155722165 . T . PASS END=155722181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:24,0 chr1 155722182 . C . PASS END=155722182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 155722183 . T . PASS END=155722199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,832:0,72,255:24,0 chr1 155722200 . C . PASS END=155722200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 155722201 . T . PASS END=155722214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 155722215 . A . PASS END=155722217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 155722218 . C . PASS END=155722218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155722219 . T . PASS END=155722241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 155722242 . A . PASS END=155722247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:33:17:0,33,495:0,37,255:11,0 chr1 155722248 . G . PASS END=155722248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 155722249 . T . PASS END=155722252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:20:0,33,495:0,60,255:13,0 chr1 155722253 . G . PASS END=155722254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:21:0,42,630:0,50,255:14,0 chr1 155722255 . A . PASS END=155722255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 155722256 . C . PASS END=155722262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 155722263 . A . PASS END=155722263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:16,0 chr1 155722264 . G . PASS END=155722274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 155722275 . A . PASS END=155722275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 155722276 . A . PASS END=155722276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 155722277 . A . PASS END=155722278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 155722279 . T . PASS END=155722279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 155722280 . G . PASS END=155722281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 155722282 . G . PASS END=155722282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 155722283 . G . PASS END=155722298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 155722299 . A . PASS END=155722300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 155722301 . G . PASS END=155722301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155722302 . T . PASS END=155722302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 155722303 . G . PASS END=155722308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155722309 . C . PASS END=155722325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,660:0,54,255:19,0 chr1 155722326 . T . PASS END=155722326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 155722327 . T . PASS END=155722328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155722329 . T . PASS END=155722329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 155722330 . G . PASS END=155722336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155722337 . T . PASS END=155722337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 155722338 . C . PASS END=155722351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:15,0 chr1 155722352 . A . PASS END=155722352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 155722353 . T . PASS END=155722357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 155722358 . A . PASS END=155722362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155722363 . C . PASS END=155722363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr1 155722364 . T . PASS END=155722373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 155722374 . C . PASS END=155722381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 155722995 . C . PASS END=155723032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,578:0,48,255:19,0 chr1 155723033 . G . PASS END=155723042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:26,0 chr1 155723043 . G . PASS END=155723138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,992:0,81,255:36,0 chr1 155723139 . C . PASS END=155723139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:29,0 chr1 155723140 . T . PASS END=155723143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:29,0 chr1 155723144 . T . PASS END=155723144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:27,2 chr1 155723145 . G . PASS END=155723145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1072:0,30,255:27,2 chr1 155723146 . G . PASS END=155723146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1123:0,58,255:28,0 chr1 155723147 . G . PASS END=155723150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 155723151 . T . PASS END=155723174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,849:0,60,255:26,0 chr1 155723175 . C . PASS END=155723175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,849:0,31,255:20,0 chr1 155723176 . C . PASS END=155723179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,945:0,65,255:23,0 chr1 155723180 . C . PASS END=155723180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,909:0,50,255:23,0 chr1 155723181 . T . PASS END=155723187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr1 155723188 . G . PASS END=155723188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr1 155723189 . G . PASS END=155723195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr1 155723196 . T . PASS END=155723201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 155723202 . A . PASS END=155723205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:39:22:0,39,585:0,53,255:13,0 chr1 155724166 . C . PASS END=155724262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:36:0,93,1283:0,98,255:40,0 chr1 155724263 . T . PASS END=155724263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:67:43:0,67,1399:0,67,255:31,0 chr1 155724264 . C . PASS END=155724264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1440:0,112,255:32,0 chr1 155724265 . T . PASS END=155724265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1249:0,67,255:30,0 chr1 155724266 . G . PASS END=155724275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1143:0,85,255:31,0 chr1 155724276 . T . PASS END=155724276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:29,0 chr1 155724277 . C . PASS END=155724277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 155724278 . T . PASS END=155724278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1025:0,52,255:25,0 chr1 155724279 . C . PASS END=155724279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,102,255:23,0 chr1 155726749 . C . PASS END=155726868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:50:0,120,1800:0,140,255:40,0 chr1 155726971 . C . PASS END=155727082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:40:0,84,1260:0,109,255:40,0 chr1 155727083 . C . PASS END=155727083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:41:0,75,1125:0,123,255:25,0 chr1 155727084 . C . PASS END=155727087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,110,255:27,0 chr1 155727088 . G . PASS END=155727089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 155727090 . G . PASS END=155727091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:28,0 chr1 155727092 . A . PASS END=155727104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:26,0 chr1 155727105 . G . PASS END=155727114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:23:0,48,720:0,64,255:18,0 chr1 155727682 . C . LowDepth;LowGQ END=155727825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 155730235 . T . PASS END=155730411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:37:0,81,1215:0,111,255:40,0 chr1 155730412 . A . PASS END=155730426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:24:0,66,990:0,72,255:25,0 chr1 155730427 . T . PASS END=155730432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 155731981 . C . PASS END=155731986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 155731987 . C . PASS END=155731988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 155731989 . G . PASS END=155731989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 155731990 . A . PASS END=155731991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 155731992 . A . PASS END=155731992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 155731993 . A . PASS END=155731994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,607:0,48,255:17,0 chr1 155731995 . C . PASS END=155731995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 155731996 . T . PASS END=155731998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 155731999 . G . PASS END=155731999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 155732000 . G . PASS END=155732008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,607:0,54,255:19,0 chr1 155732009 . A . PASS END=155732032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:24,0 chr1 155732033 . T . PASS END=155732033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 155732034 . C . PASS END=155732047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 155732048 . T . PASS END=155732052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:27,0 chr1 155732053 . A . PASS END=155732054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,978:0,65,255:27,0 chr1 155732055 . C . PASS END=155732060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1019:0,84,255:30,0 chr1 155732061 . G . PASS END=155732061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 155732062 . C . PASS END=155732069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1156:0,93,255:32,0 chr1 155732070 . G . PASS END=155732070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr1 155732071 . C . PASS END=155732078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:34,0 chr1 155732079 . T . PASS END=155732079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:31,0 chr1 155732080 . G . PASS END=155732080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1278:0,89,255:32,0 chr1 155732081 . T . PASS END=155732081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:31,0 chr1 155732082 . C . PASS END=155732125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1131:0,80,255:32,0 chr1 155732126 . T . PASS END=155732126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 155732127 . G . PASS END=155732127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155732128 . A . PASS END=155732128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:26,0 chr1 155732129 . T . PASS END=155732136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,964:0,70,255:26,0 chr1 155732137 . G . PASS END=155732137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:25,0 chr1 155732138 . C . PASS END=155732138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155732139 . C . PASS END=155732163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:26,0 chr1 155732164 . T . PASS END=155732165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 155733103 . C . PASS END=155733121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:26,0 chr1 155733122 . C . PASS END=155733329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,994:0,81,255:40,0 chr1 155733330 . A . PASS END=155733330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 155733331 . G . PASS END=155733337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 155733338 . C . PASS END=155733339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1011:0,71,255:28,0 chr1 155733340 . G . PASS END=155733343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155733344 . C . PASS END=155733355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:27:0,69,1035:0,71,255:26,0 chr1 155734635 . C . PASS END=155735205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:31:0,86,1194:0,86,255:40,0 chr1 155735206 . G . PASS END=155735207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 155735208 . A . PASS END=155735224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 155735225 . C . PASS END=155735233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 155735234 . T . PASS END=155735234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:22,0 chr1 155735235 . A . PASS END=155735238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,963:0,67,255:24,0 chr1 155735239 . C . PASS END=155735249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 155735250 . T . PASS END=155735250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 155735251 . C . PASS END=155735260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 155735261 . C . PASS END=155735262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:27,0 chr1 155735263 . T . PASS END=155735263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,934:0,56,255:25,0 chr1 155735264 . C . PASS END=155735281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1031:0,71,255:25,0 chr1 155735282 . C . PASS END=155735282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 155735283 . C . PASS END=155735309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:25,0 chr1 155735310 . A . PASS END=155735311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr1 155735312 . G . PASS END=155735319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,70,255:25,0 chr1 155735320 . T . PASS END=155735320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,1 chr1 155735321 . T . PASS END=155735321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,792:0,23,255:24,0 chr1 155735322 . G . PASS END=155735342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 155735343 . C . PASS END=155735346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155735347 . G . PASS END=155735356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 155735357 . C . PASS END=155735358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 155735359 . A . PASS END=155735359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 155735360 . G . PASS END=155736500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:29:0,80,1111:0,80,255:40,0 chr1 155737216 . C . PASS END=155737292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:37:0,84,1260:0,108,255:40,0 chr1 155737293 . A . PASS END=155737293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:29,2 chr1 155737294 . T . PASS END=155737294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:25:37:0,25,1141:0,25,255:28,2 chr1 155737295 . T . PASS END=155737295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:32,0 chr1 155737296 . T . PASS END=155737319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1073:0,85,255:34,0 chr1 155737320 . T . PASS END=155737320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:29,0 chr1 155737321 . C . PASS END=155737332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:31:0,86,1058:0,86,255:31,0 chr1 155740858 . T . PASS END=155741008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:98:38:0,98,1358:0,98,255:40,0 chr1 155742857 . T . PASS END=155742866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr1 155742867 . C . PASS END=155742879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 155742880 . G . PASS END=155742880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 155742881 . A . PASS END=155742884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 155742885 . T . PASS END=155742911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,919:0,81,255:34,0 chr1 155742912 . A . PASS END=155742912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:34,0 chr1 155742913 . A . PASS END=155742953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1213:0,91,255:35,0 chr1 155742954 . T . PASS END=155742954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr1 155742955 . G . PASS END=155742970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,89,255:31,0 chr1 155742971 . A . PASS END=155742971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 155742972 . C . PASS END=155742974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 155742975 . G . PASS END=155742975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 155742976 . C . PASS END=155742977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 155742978 . T . PASS END=155742979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 155742980 . G . PASS END=155742983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155742984 . A . PASS END=155742988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,948:0,70,255:26,0 chr1 155742989 . G . PASS END=155742989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,836:0,50,255:23,0 chr1 155742990 . G . PASS END=155743001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,953:0,65,255:23,0 chr1 155744793 . C . PASS END=155744795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,390:0,33,255:12,0 chr1 155744796 . T . PASS END=155744796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 155744797 . C . PASS END=155744798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 155744799 . T . PASS END=155744799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:12,0 chr1 155744800 . C . PASS END=155744800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 155744801 . T . PASS END=155744801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:5:13:0,5,274:0,5,255:11,0 chr1 155744802 . T . PASS END=155744805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 155744806 . A . PASS END=155744806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 155744807 . G . PASS END=155744807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 155744808 . T . PASS END=155744808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 155744809 . T . PASS END=155744826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,399:0,39,255:13,0 chr1 155744827 . A . PASS END=155744827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 155744828 . A . PASS END=155744835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr1 155744836 . A . PASS END=155744836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 155744837 . T . PASS END=155744845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 155744846 . A . PASS END=155744846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 155744847 . A . PASS END=155744853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 155744854 . A . PASS END=155744854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 155744855 . A . PASS END=155744857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 155744858 . A . PASS END=155744858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 155744859 . G . PASS END=155744861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 155744862 . G . PASS END=155744868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 155744869 . T . PASS END=155744869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr1 155744870 . C . PASS END=155744874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 155744875 . C . PASS END=155744875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 155744876 . A . PASS END=155744909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,811:0,61,255:26,0 chr1 155744910 . G . PASS END=155744911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 155744912 . T . PASS END=155744930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,874:0,60,255:26,0 chr1 155744931 . C . PASS END=155744931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 155744932 . G . PASS END=155744954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,804:0,75,255:25,0 chr1 155744955 . C . PASS END=155744955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 155744956 . C . PASS END=155744964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,868:0,61,255:25,0 chr1 155746186 . A . PASS END=155746187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 155746188 . G . PASS END=155746199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,746:0,63,255:25,0 chr1 155746200 . T . PASS END=155746210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:31,0 chr1 155746211 . T . PASS END=155746211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 155746212 . C . PASS END=155746249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1133:0,86,255:35,0 chr1 155746250 . A . PASS END=155746250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 155746251 . T . PASS END=155746261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:34,0 chr1 155746262 . A . PASS END=155746272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:25,0 chr1 155747413 . C . PASS END=155747413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 155747414 . T . PASS END=155747414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 155747415 . G . PASS END=155747415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 155747416 . C . PASS END=155747418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 155747419 . C . PASS END=155747419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 155747420 . A . PASS END=155747420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 155747421 . T . PASS END=155747421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 155747422 . C . PASS END=155747424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 155747425 . C . PASS END=155747425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 155747426 . T . PASS END=155747431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 155747432 . A . PASS END=155747432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,717:0,38,255:22,0 chr1 155747433 . G . PASS END=155747433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 155747434 . T . PASS END=155747434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 155747435 . C . PASS END=155747440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,917:0,62,255:27,0 chr1 155747441 . C . PASS END=155747442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155747443 . C . PASS END=155747443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 155747444 . T . PASS END=155747444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155747445 . G . PASS END=155747445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 155747446 . T . PASS END=155747448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 155747449 . T . PASS END=155747449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 155747450 . G . PASS END=155747472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1135:0,80,255:35,0 chr1 155747473 . A . PASS END=155747474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1081:0,74,255:32,0 chr1 155747475 . C . PASS END=155747477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:36,0 chr1 155747478 . T . PASS END=155747478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1140:0,61,255:34,0 chr1 155747479 . C . PASS END=155747611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:37:0,90,1347:0,95,255:40,0 chr1 155753777 . C . PASS END=155753880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:54:0,120,1800:0,130,255:40,0 chr1 155755125 . A . PASS END=155755134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,135,255:40,0 chr1 155755135 . A . PASS END=155755165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,111,1676:0,111,255:40,0 chr1 155764841 . T . PASS END=155764844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,886:0,42,255:26,0 chr1 155764845 . G . PASS END=155764849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 155764850 . T . PASS END=155764850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 155764851 . C . PASS END=155764862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 155764863 . A . PASS END=155764863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 155764864 . G . PASS END=155764919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1172:0,93,255:35,0 chr1 155764920 . A . PASS END=155764920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 155764921 . T . PASS END=155764936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1155:0,80,255:28,0 chr1 155764937 . C . PASS END=155764937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 155764938 . T . PASS END=155764938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155764939 . T . PASS END=155764942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:26,0 chr1 155774740 . C . PASS END=155774748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,861:0,62,255:26,0 chr1 155774749 . C . PASS END=155774766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,988:0,84,255:30,0 chr1 155774767 . G . PASS END=155774767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 155774768 . T . PASS END=155774877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1103:0,88,255:37,0 chr1 155774878 . C . PASS END=155774878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 155774879 . T . PASS END=155774886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 155774887 . G . PASS END=155774918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr1 155774919 . C . PASS END=155774927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,50,255:19,0 chr1 155774928 . A . PASS END=155774932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr1 155783425 . C . PASS END=155783425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 155783426 . T . PASS END=155783426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 155783427 . G . PASS END=155783427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 155783428 . G . PASS END=155783431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:23,0 chr1 155783432 . G . PASS END=155783432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:21,0 chr1 155783433 . A . PASS END=155783440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 155783441 . C . PASS END=155783441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:23,0 chr1 155783442 . A . PASS END=155783444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 155783445 . C . PASS END=155783445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 155783446 . T . PASS END=155783447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 155783448 . G . PASS END=155783448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,876:0,39,255:25,0 chr1 155783449 . A . PASS END=155783463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,917:0,62,255:26,0 chr1 155783464 . C . PASS END=155783470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,942:0,81,255:29,0 chr1 155783471 . A . PASS END=155783471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:28,0 chr1 155783472 . C . PASS END=155783476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1066:0,87,255:31,0 chr1 155783477 . T . PASS END=155783477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 155783478 . G . PASS END=155783483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1125:0,93,255:32,0 chr1 155783484 . T . PASS END=155783484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr1 155783485 . C . PASS END=155783485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 155783486 . T . PASS END=155783486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 155783487 . C . PASS END=155783491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 155783492 . A . PASS END=155783492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1066:0,65,255:31,0 chr1 155783493 . A . PASS END=155783493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 155783494 . A . PASS END=155783494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 155783495 . G . PASS END=155783495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 155783496 . T . PASS END=155783496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:47:32:0,47,1067:0,47,255:27,0 chr1 155783497 . A . PASS END=155783498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 155783499 . T . PASS END=155783499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:16:32:0,16,943:0,16,255:25,0 chr1 155783500 . A . PASS END=155783502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 155783503 . T . PASS END=155783503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 155783504 . C . PASS END=155783530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 155783531 . G . PASS END=155783531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr1 155783532 . G . PASS END=155783552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1122:0,83,255:33,0 chr1 155783553 . C . PASS END=155783556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:22,0 chr1 155783557 . A . PASS END=155783561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,810:0,77,255:19,0 chr1 155783562 . T . PASS END=155783563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 155783564 . T . PASS END=155783566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 155783567 . C . PASS END=155783584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155783585 . A . PASS END=155783585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 155783586 . C . PASS END=155783586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:15,0 chr1 155783587 . T . PASS END=155783595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:17,0 chr1 155784121 . C . PASS END=155784130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,101,1407:0,101,255:40,0 chr1 155784131 . A . PASS END=155784131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1311:0,76,255:39,0 chr1 155784132 . T . PASS END=155784240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:93:42:0,93,1432:0,93,255:40,0 chr1 155785596 . C . PASS END=155785629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,135,255:40,0 chr1 155785630 . G . PASS END=155785691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,117,1755:0,128,255:40,0 chr1 155786003 . C . PASS END=155786053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:86:0,120,1800:0,218,255:40,0 chr1 155790397 . C . PASS END=155790447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,3:89:99:76:0,120,1800:0,185,255:40,0 chr1 155791265 . A . PASS END=155791339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:66:0,120,1800:0,166,255:40,0 chr1 155792077 . A . PASS END=155792267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:34:0,88,1166:0,88,255:40,0 chr1 155796628 . C . PASS END=155796632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 155796633 . G . PASS END=155796644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:19,0 chr1 155796645 . C . PASS END=155796658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,654:0,60,255:26,0 chr1 155796659 . C . PASS END=155796662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 155796663 . T . PASS END=155796664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 155796665 . C . PASS END=155796681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,993:0,84,255:29,0 chr1 155796682 . G . PASS END=155796682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 155796683 . A . PASS END=155796719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:31:0,86,1233:0,86,255:40,0 chr1 155796720 . T . PASS END=155796720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1357:0,54,255:38,0 chr1 155796721 . C . PASS END=155796790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1224:0,92,255:39,0 chr1 155796791 . C . PASS END=155796819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 155823067 . C . PASS END=155823068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 155823069 . C . PASS END=155823069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 155823070 . C . PASS END=155823086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,933:0,75,255:26,0 chr1 155823087 . T . PASS END=155823087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 155823088 . C . PASS END=155823088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 155823089 . A . PASS END=155823094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr1 155823095 . C . PASS END=155823095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 155823096 . T . PASS END=155823237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1105:0,87,255:40,0 chr1 155823238 . G . PASS END=155823238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:32,0 chr1 155823239 . A . PASS END=155823260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1296:0,81,255:37,0 chr1 155823261 . G . PASS END=155823261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:30,0 chr1 155823262 . T . PASS END=155823284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1194:0,83,255:34,0 chr1 155823285 . T . PASS END=155823285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:31,0 chr1 155823286 . C . PASS END=155823535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1173:0,85,255:40,0 chr1 155823536 . T . PASS END=155823548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,77,255:25,0 chr1 155823549 . C . PASS END=155823550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 155823551 . T . PASS END=155823560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 155823561 . C . PASS END=155823561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:22,0 chr1 155823562 . A . PASS END=155823564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 155823565 . G . PASS END=155823565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 155823566 . C . PASS END=155823570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 155823571 . T . PASS END=155823571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 155829553 . A . PASS END=155829586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,124,255:40,0 chr1 155837756 . A . PASS END=155837757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 155837758 . G . PASS END=155837770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 155837771 . T . PASS END=155837771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 155837772 . G . PASS END=155837776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 155837777 . G . PASS END=155837777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 155837778 . C . PASS END=155837788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr1 155837789 . C . PASS END=155837817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1027:0,84,255:33,0 chr1 155837818 . A . PASS END=155837818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 155837819 . C . PASS END=155837827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1233:0,88,255:32,0 chr1 155837828 . T . PASS END=155837836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1350:0,99,255:32,0 chr1 155837837 . G . PASS END=155837837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:31,0 chr1 155837838 . C . PASS END=155837863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1241:0,86,255:34,0 chr1 155837864 . A . PASS END=155837864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1191:0,69,255:32,2 chr1 155837865 . G C, 138.37 PASS DP=34;MQ=250.00;MQRankSum=1.631;ReadPosRankSum=0.917;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,33,0:0.971,0.000:34:0,19,0:1,14,0:88:176,91,0,276,276,276:255,108,0:0,2:1.3837e+02,8.8374e+01,0.0000e+00,2.7314e+02,3.0791e+02,2.7615e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,17,16:1,0,19,14 chr1 155837866 . A . PASS END=155837866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 155837867 . A . PASS END=155837873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 155837874 . A . PASS END=155837874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:30,0 chr1 155837875 . C . PASS END=155837876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:31,0 chr1 155837877 . A . PASS END=155837877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1263:0,75,255:31,0 chr1 155837878 . T . PASS END=155837902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:34:0,83,1226:0,83,255:34,0 chr1 155837903 . G . PASS END=155837907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1332:0,92,255:35,0 chr1 155837908 . A . PASS END=155837908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr1 155837909 . G . PASS END=155837910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1396:0,101,255:35,0 chr1 155837911 . A . PASS END=155837911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:34,0 chr1 155837912 . T . PASS END=155837952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:35:0,86,1151:0,86,255:37,0 chr1 155837953 . G . PASS END=155837953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 155837954 . T . PASS END=155837961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:34,0 chr1 155837962 . G . PASS END=155837962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:27,0 chr1 155837963 . A . PASS END=155837968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,91,255:29,0 chr1 155837969 . A . PASS END=155837969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:27,0 chr1 155837970 . T . PASS END=155837975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1169:0,80,255:30,0 chr1 155837976 . T . PASS END=155837976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 155837977 . G . PASS END=155837980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 155837981 . G . PASS END=155837981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 155837982 . G . PASS END=155837985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 155837986 . G . PASS END=155837986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 155837987 . G . PASS END=155838014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1216:0,83,255:33,0 chr1 155838015 . A . PASS END=155838015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:25,0 chr1 155838016 . G . PASS END=155838017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 155838018 . A . PASS END=155838021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 155838022 . G . PASS END=155838022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 155838023 . C . PASS END=155838024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 155838025 . G . PASS END=155838026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155838027 . C . PASS END=155838027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 155838028 . C . PASS END=155838032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155838033 . A . PASS END=155838033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:25,0 chr1 155838034 . A . PASS END=155838034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr1 155838035 . G . PASS END=155838040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 155838041 . A . PASS END=155838041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 155838042 . C . PASS END=155838042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 155838043 . A . PASS END=155838061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,893:0,64,255:26,0 chr1 155838062 . G . PASS END=155838066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155838067 . G . PASS END=155838068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155838069 . A . PASS END=155838069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155838070 . T . PASS END=155838078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:26,0 chr1 155838079 . G . PASS END=155838109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 155838110 . A . PASS END=155838112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 155838113 . A . PASS END=155838125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:28,0 chr1 155838126 . T . PASS END=155838127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155838128 . T . PASS END=155838129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155838130 . A . PASS END=155838133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 155838134 . G . PASS END=155838226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr1 155838227 . T . PASS END=155838227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1365:0,73,255:37,0 chr1 155838228 . C . PASS END=155838229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1443:0,117,255:39,0 chr1 155838230 . C . PASS END=155838241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1421:0,104,255:40,0 chr1 155838242 . T . PASS END=155838242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1303:0,51,255:35,0 chr1 155838243 . G . PASS END=155838266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,101,1412:0,101,255:39,0 chr1 155838267 . T C, 163.00 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,22,0:0,17,0:113:201,116,0,1424,116,1424:255,117,0:0,0:1.6300e+02,1.1300e+02,0.0000e+00,4.5000e+02,1.4777e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,20:0,0,18,21 chr1 155838268 . G . PASS END=155838291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1350:0,84,255:37,0 chr1 155838292 . A . PASS END=155838292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:29,0 chr1 155838293 . C . PASS END=155838304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,88,255:31,0 chr1 155838305 . A . PASS END=155838313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1186:0,83,255:28,0 chr1 155838314 . T . PASS END=155838314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 155838315 . C . PASS END=155838318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 155838319 . A . PASS END=155838320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 155838321 . G . PASS END=155838321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155838322 . A . PASS END=155838322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:26,0 chr1 155838323 . C . PASS END=155838332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 155838333 . T . PASS END=155838333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 155838334 . G . PASS END=155838337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 155838338 . A . PASS END=155838338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 155838339 . A . PASS END=155838429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1208:0,83,255:36,0 chr1 155838430 . C . PASS END=155838430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 155838431 . T . PASS END=155838439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1063:0,84,255:28,0 chr1 155838440 . T . PASS END=155838441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 155838442 . G . PASS END=155838444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 155838445 . C . PASS END=155838445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:26,0 chr1 155838446 . T . PASS END=155838450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 155838451 . T . PASS END=155838451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155838452 . T . PASS END=155838460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 155838461 . T . PASS END=155838512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:26,0 chr1 155838513 . A . PASS END=155838523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 155838524 . T . PASS END=155838525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155838526 . G . PASS END=155838550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 155838551 . T . PASS END=155838574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,336:0,33,255:11,0 chr1 155838575 . A . PASS END=155838582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 155850291 . A . PASS END=155850414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,116,1576:0,116,255:40,0 chr1 155850980 . G . PASS END=155851101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,111,1720:0,111,255:40,0 chr1 155851102 . A . PASS END=155851102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1619:0,75,255:40,0 chr1 155851103 . T . PASS END=155851168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:37:0,93,1327:0,95,255:40,0 chr1 155851169 . A . PASS END=155851169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:30,0 chr1 155851170 . G . PASS END=155851200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,86,255:34,0 chr1 155851201 . G . PASS END=155851209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:31:0,75,1125:0,86,255:26,0 chr1 155851210 . G . PASS END=155851218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1086:0,87,255:29,0 chr1 155851219 . A . PASS END=155851219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 155851220 . G . PASS END=155851226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:29,0 chr1 155851227 . T . PASS END=155851229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 155851230 . A . PASS END=155851236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 155851237 . A . PASS END=155851237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:28,0 chr1 155851238 . G . PASS END=155851249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 155851250 . A . PASS END=155851253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155851254 . C . PASS END=155851260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155851261 . A . PASS END=155851261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 155851262 . A . PASS END=155851262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 155851263 . G . PASS END=155851284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 155851285 . C . PASS END=155851285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 155851286 . T . PASS END=155851290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 155851291 . G . PASS END=155851299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:18,0 chr1 155870179 . T . PASS END=155870294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:94:41:0,94,1496:0,94,255:40,0 chr1 155870295 . T . PASS END=155870295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1460:0,74,255:40,0 chr1 155870296 . C . PASS END=155870358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:37:0,80,1335:0,80,255:40,0 chr1 155870359 . A . PASS END=155870359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:32,0 chr1 155870360 . A . PASS END=155870378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1296:0,94,255:33,0 chr1 155870379 . G . PASS END=155870387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:30,0 chr1 155870388 . C . PASS END=155870388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 155870389 . C . PASS END=155870393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 155870394 . C . PASS END=155870394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 155870395 . T . PASS END=155870397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155870398 . T . PASS END=155870409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 155874102 . C . PASS END=155874103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 155874104 . G . PASS END=155874293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:29:0,87,1102:0,87,255:40,0 chr1 155874394 . C . PASS END=155874401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:80:0,120,1800:0,207,255:40,0 chr1 155874522 . C . PASS END=155874595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:61:0,120,1800:0,177,255:40,2 chr1 155880236 . C . PASS END=155880236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr1 155880241 . C . PASS END=155880297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:48:0,102,1530:0,128,255:40,0 chr1 155880447 . C . PASS END=155880465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:18,0 chr1 155880466 . A . PASS END=155880466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 155880467 . G . PASS END=155880491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:19,0 chr1 155880492 . C . PASS END=155880499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 155880500 . A . PASS END=155880500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,635:0,30,255:19,0 chr1 155880501 . G . PASS END=155880503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 155880504 . C . PASS END=155880504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155880505 . A . PASS END=155880512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 155880513 . T . PASS END=155880514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155880515 . C . PASS END=155880518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155880519 . A . PASS END=155880523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,790:0,50,255:19,0 chr1 155880524 . C . PASS END=155880535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 155880536 . C . PASS END=155880536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 155880537 . G . PASS END=155880538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 155880539 . G . PASS END=155880568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr1 155880569 . T . PASS END=155880569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 155880570 . C . PASS END=155880572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 155880573 . C G, 50.00 PASS DP=25;MQ=250.00;MQRankSum=3.783;ReadPosRankSum=2.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,18,0:0.720,0.000:25:3,11,0:4,7,0:42:85,0,40,557,250,808:255,0,188:6,0:5.0000e+01,2.6379e-04,4.2948e+01,4.5000e+02,2.8504e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,1,10,8:4,3,9,9 chr1 155880574 . G . PASS END=155880583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 155880584 . A . PASS END=155880584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:23,0 chr1 155880585 . G . PASS END=155880588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 155880589 . A . PASS END=155880589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:22,0 chr1 155880590 . A . PASS END=155880595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:24,0 chr1 155880669 . C . PASS END=155880676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,120,1444:0,120,255:40,0 chr1 155883912 . C . PASS END=155884105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:37:0,94,1374:0,94,255:40,0 chr1 155884106 . G . PASS END=155884111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:49:0,90,1350:0,114,255:32,0 chr1 155885614 . T . PASS END=155885755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:40:0,99,1485:0,120,255:40,0 chr1 155886416 . C . PASS END=155886528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:42:0,93,1395:0,105,255:40,1 chr1 155887290 . C . PASS END=155887292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:34,0 chr1 155887293 . G . PASS END=155887293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:34,0 chr1 155887294 . T . PASS END=155887300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1213:0,91,255:36,0 chr1 155887301 . G . PASS END=155887301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1175:0,77,255:34,0 chr1 155887302 . C . PASS END=155887310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1252:0,92,255:36,0 chr1 155887311 . T . PASS END=155887311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:34,0 chr1 155887312 . T . PASS END=155887312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1185:0,58,255:33,0 chr1 155887313 . C . PASS END=155887317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1183:0,91,255:36,0 chr1 155887318 . T . PASS END=155887318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1100:0,42,255:32,0 chr1 155887319 . C . PASS END=155887324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1230:0,94,255:39,0 chr1 155887325 . G . PASS END=155887325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1197:0,67,255:36,0 chr1 155887326 . T . PASS END=155887329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1321:0,100,255:39,0 chr1 155887330 . T . PASS END=155887330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1276:0,64,255:38,0 chr1 155887331 . C . PASS END=155887333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:40,0 chr1 155887334 . C . PASS END=155887334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1300:0,57,255:36,0 chr1 155887335 . T . PASS END=155887342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1338:0,84,255:39,0 chr1 155887343 . G . PASS END=155887343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1366:0,79,255:37,0 chr1 155887344 . T . PASS END=155887355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:98:44:0,98,1349:0,98,255:40,0 chr1 155887356 . C . PASS END=155887356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:38:46:0,38,1234:0,38,255:38,0 chr1 155887357 . T . PASS END=155887365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:46:0,88,1377:0,88,255:40,0 chr1 155887366 . C . PASS END=155887366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1271:0,71,255:37,0 chr1 155887367 . T . PASS END=155887371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:45:0,85,1303:0,85,255:40,0 chr1 155887372 . A . PASS END=155887372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:29:45:0,29,1177:0,29,255:35,0 chr1 155887373 . G . PASS END=155887379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:43:0,84,1260:0,97,255:38,0 chr1 155887380 . C . PASS END=155887380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,7:45:18:45:0,18,1103:0,18,255:23,0 chr1 155887381 . T . PASS END=155887385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:44:0,90,1350:0,115,255:33,0 chr1 155887386 . C . PASS END=155887386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:29:43:0,29,1074:0,29,255:26,0 chr1 155887387 . T . PASS END=155887391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:41:0,89,1246:0,89,255:34,0 chr1 155887392 . C . PASS END=155887392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:72:41:0,72,1043:0,72,255:31,0 chr1 155887393 . T . PASS END=155887425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1186:0,83,255:37,0 chr1 155887426 . A . PASS END=155887463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:26,0 chr1 155891166 . C . PASS END=155891172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 155891173 . G . PASS END=155891201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:23,0 chr1 155891202 . C . PASS END=155891202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 155891203 . G . PASS END=155891209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,854:0,69,255:24,0 chr1 155891210 . G . PASS END=155891210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 155891211 . T . PASS END=155891220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,800:0,75,255:26,0 chr1 155891221 . G . PASS END=155891247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:29:0,83,1260:0,83,255:39,0 chr1 155891248 . A . PASS END=155891248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr1 155891249 . A . PASS END=155891419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:39:0,87,1305:0,104,255:40,0 chr1 155891652 . C . PASS END=155891709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:67:0,120,1800:0,201,255:40,0 chr1 155893418 . T . PASS END=155893478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1133:0,89,255:40,0 chr1 155895423 . C . PASS END=155895424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 155895425 . G . PASS END=155895468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,747:0,62,255:25,0 chr1 155895469 . G . PASS END=155895490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1097:0,87,255:31,0 chr1 155895491 . G . PASS END=155895491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 155895492 . C . PASS END=155895527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1180:0,93,255:33,0 chr1 155895528 . A . PASS END=155895528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1086:0,41,255:30,0 chr1 155895529 . T . PASS END=155895552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1188:0,96,255:34,0 chr1 155895553 . G . PASS END=155895554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 155895555 . C . PASS END=155895556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,98,255:27,0 chr1 155895557 . T . PASS END=155895561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1170:0,69,255:26,0 chr1 155895562 . C . PASS END=155895564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:28,0 chr1 155895565 . T . PASS END=155895565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 155895566 . C . PASS END=155895588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 155895589 . C . PASS END=155895592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 155895593 . A . PASS END=155895605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:17:0,51,607:0,51,255:19,0 chr1 155895606 . A . PASS END=155895606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,507:0,20,255:16,0 chr1 155895607 . C . PASS END=155895611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 155895612 . A . PASS END=155895612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 155895613 . A . PASS END=155895615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 155895616 . T . PASS END=155895623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 155895624 . A . PASS END=155895634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:11:0,27,405:0,33,255:9,0 chr1 155896467 . C . PASS END=155896630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:32:0,83,1158:0,83,255:40,0 chr1 155896895 . T . PASS END=155896947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,161,255:40,0 chr1 155899087 . C . PASS END=155899166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:44:0,99,1468:0,99,255:40,0 chr1 155899503 . C . PASS END=155899631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:40:0,90,1350:0,102,255:40,0 chr1 155903424 . C . PASS END=155903437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 155903438 . T . PASS END=155903438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 155903439 . C . PASS END=155903445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 155903446 . G . PASS END=155903515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,235:0,21,235:9,0 chr1 155903516 . C . PASS END=155903524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 155903525 . G . PASS END=155903546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 155903547 . A . PASS END=155903547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 155903548 . C . PASS END=155903569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 155903570 . C . PASS END=155903585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 155903586 . T . PASS END=155903587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 155903588 . G . PASS END=155903612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,413:0,33,255:13,0 chr1 155903613 . A . PASS END=155903613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 155903614 . G . PASS END=155903626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 155903627 . A . PASS END=155903627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:10,0 chr1 155903628 . T . PASS END=155903639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 155903640 . C . PASS END=155903640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 155904127 . C . PASS END=155904139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:40,0 chr1 155904140 . G . PASS END=155904153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:37,0 chr1 155904154 . C . PASS END=155904154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:31,0 chr1 155904155 . C . PASS END=155904164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1350:0,102,255:32,0 chr1 155911501 . A . PASS END=155911524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:33:0,90,1264:0,90,255:39,0 chr1 155911525 . T . PASS END=155911525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1268:0,70,255:36,0 chr1 155911526 . C . PASS END=155911554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1366:0,103,255:40,0 chr1 155911555 . T . PASS END=155911555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1389:0,79,255:37,0 chr1 155911556 . C . PASS END=155911622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1178:0,83,255:38,0 chr1 155911623 . G . PASS END=155911623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:28,0 chr1 155911624 . G . PASS END=155911624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 155911625 . T . PASS END=155911626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:32:0,75,1125:0,96,255:25,0 chr1 155911627 . G . PASS END=155911627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 155911628 . C . PASS END=155911700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,902:0,65,255:26,0 chr1 155911701 . T . PASS END=155911711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155911712 . C . PASS END=155911751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,947:0,65,255:26,0 chr1 155911752 . T . PASS END=155911752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 155911753 . C . PASS END=155911759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 155911760 . A . PASS END=155911760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155911761 . C . PASS END=155911764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 155911765 . G . PASS END=155911765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155911766 . G . PASS END=155911777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 155911778 . C . PASS END=155911778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 155911779 . T . PASS END=155911779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:25,0 chr1 155911780 . C . PASS END=155911782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 155911783 . C . PASS END=155911783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 155911784 . C . PASS END=155911787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 155911788 . T . PASS END=155911788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 155911789 . T . PASS END=155911793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 155911794 . A . PASS END=155911794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 155911795 . G . PASS END=155911805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 155911806 . A . PASS END=155911806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:28,0 chr1 155911807 . C . PASS END=155911840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1113:0,80,255:34,0 chr1 155911841 . G . PASS END=155911843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 155911844 . A . PASS END=155911849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:28,0 chr1 155911850 . T . PASS END=155911850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:27,0 chr1 155911851 . T . PASS END=155911866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 155911867 . C . PASS END=155911870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155911871 . A . PASS END=155911871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:24,0 chr1 155911872 . C . PASS END=155911883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,955:0,65,255:26,0 chr1 155911884 . C . PASS END=155911884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 155911885 . A . PASS END=155911885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 155911886 . T . PASS END=155911891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:27,0 chr1 155911892 . T . PASS END=155911921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 155911922 . G . PASS END=155911930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 155911931 . C . PASS END=155911964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,823:0,63,255:26,0 chr1 155911965 . C . PASS END=155911967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 155911968 . C . PASS END=155911990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,978:0,78,255:26,0 chr1 155911991 . C . PASS END=155911991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:22,0 chr1 155911992 . A . PASS END=155911995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr1 155911996 . T . PASS END=155911996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:24,0 chr1 155911997 . G . PASS END=155912018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1047:0,81,255:36,0 chr1 155912019 . G . PASS END=155912019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 155912020 . G . PASS END=155912077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1055:0,84,255:37,0 chr1 155912078 . T . PASS END=155912085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 155912086 . C . PASS END=155912088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155912089 . A . PASS END=155912090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155912091 . C . PASS END=155912096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155912097 . C . PASS END=155912107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 155912108 . C . PASS END=155912112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155912113 . C . PASS END=155912113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 155912114 . A . PASS END=155912137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,86,255:31,0 chr1 155912138 . T . PASS END=155912166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 155912167 . A . PASS END=155912178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:18,0 chr1 155912179 . C . PASS END=155912185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155912186 . C . PASS END=155912203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,698:0,57,255:19,0 chr1 155912204 . A . PASS END=155912219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,782:0,63,255:26,0 chr1 155912220 . C . PASS END=155912220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155912221 . A . PASS END=155912221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 155912222 . G . PASS END=155912224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 155912225 . G . PASS END=155912225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:24,0 chr1 155912226 . G . PASS END=155912226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 155912227 . G . PASS END=155912229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 155912230 . G . PASS END=155912231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 155912232 . G . PASS END=155912240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:28,0 chr1 155912241 . T . PASS END=155912241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 155912242 . G . PASS END=155912256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 155912257 . G . PASS END=155912257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 155912258 . C . PASS END=155912258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,842:0,56,255:24,0 chr1 155912259 . T . PASS END=155912264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 155912265 . C . PASS END=155912273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1036:0,80,255:30,0 chr1 155912274 . C . PASS END=155912274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 155912275 . T . PASS END=155912407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1062:0,83,255:40,0 chr1 155912408 . G . PASS END=155912408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 155912409 . C . PASS END=155912415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1225:0,86,255:31,0 chr1 155912416 . C . PASS END=155912439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:25:0,62,945:0,62,255:24,0 chr1 155912440 . C . PASS END=155912440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:24,0 chr1 155912441 . G . PASS END=155912448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1030:0,68,255:25,0 chr1 155912449 . C . PASS END=155912460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,801:0,69,255:23,0 chr1 155912461 . G . PASS END=155912461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 155912462 . C . PASS END=155912485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,848:0,61,255:24,0 chr1 155912486 . T C, 118.77 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,13,0:0,11,0:69:157,72,0,901,72,901:255,72,0:0,0:1.1877e+02,6.8772e+01,5.1772e-07,4.5000e+02,1.0354e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,18:0,0,11,13 chr1 155912487 . G . PASS END=155912487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155912488 . A . PASS END=155912488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 155912489 . G . PASS END=155912499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 155912500 . C . PASS END=155912503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 155912504 . G . PASS END=155912505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 155912506 . G . PASS END=155912506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 155912507 . G . PASS END=155912507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 155912508 . A . PASS END=155912508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:19,0 chr1 155912509 . G . PASS END=155912511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:21,0 chr1 155912512 . T . PASS END=155912512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 155912513 . G . PASS END=155912518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155912519 . A . PASS END=155912519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 155912520 . A . PASS END=155912520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 155912521 . C . PASS END=155912521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 155912522 . A . PASS END=155912523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 155912524 . G . PASS END=155912539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr1 155912540 . T . PASS END=155912565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,684:0,54,255:19,0 chr1 155912566 . C . PASS END=155912576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 155912577 . C . PASS END=155912601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:18,0 chr1 155912602 . C . PASS END=155912625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 155917733 . T . PASS END=155917755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:24,0 chr1 155917756 . C . PASS END=155917756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 155917757 . C . PASS END=155917776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:26,0 chr1 155917777 . C . PASS END=155917782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155917783 . G . PASS END=155917806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,864:0,72,255:26,0 chr1 155920060 . C . PASS END=155920061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 155920062 . C . PASS END=155920070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 155920071 . G . PASS END=155920071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155920072 . T . PASS END=155920103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:26,0 chr1 155920104 . G . PASS END=155920158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,949:0,84,255:36,0 chr1 155920159 . T . PASS END=155920159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:32,0 chr1 155920160 . G . PASS END=155920238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1272:0,84,255:37,0 chr1 155920239 . A . PASS END=155920239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1257:0,64,255:30,0 chr1 155920240 . C . PASS END=155920252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1272:0,92,255:32,0 chr1 155920253 . G . PASS END=155920253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:28,0 chr1 155920254 . C . PASS END=155920258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:30,0 chr1 155920259 . A . PASS END=155920273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,66,255:26,0 chr1 155920620 . C . PASS END=155920700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,545:0,44,255:19,0 chr1 155920701 . G . PASS END=155920701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 155920702 . G . PASS END=155920707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,582:0,48,255:16,0 chr1 155920708 . T . PASS END=155920708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 155920709 . C . PASS END=155920734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 155920735 . A . PASS END=155920735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155920736 . G . PASS END=155920798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:19,0 chr1 155920799 . T . PASS END=155920799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 155920800 . C . PASS END=155920800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 155920801 . T . PASS END=155920801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 155920802 . C . PASS END=155920802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 155920803 . C . PASS END=155920803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 155920804 . C . PASS END=155920840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,645:0,51,255:19,0 chr1 155920841 . G . PASS END=155920859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 155920860 . G . PASS END=155920865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 155920866 . C . PASS END=155920898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,869:0,66,255:23,0 chr1 155920899 . C . PASS END=155920900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155920901 . G . PASS END=155920904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:23,0 chr1 155920905 . T . PASS END=155920905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:32:27:0,32,873:0,32,255:23,0 chr1 155920906 . A . PASS END=155920925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,955:0,68,255:26,0 chr1 155920926 . C . PASS END=155920940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 155920941 . A . PASS END=155920942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 155920943 . G . PASS END=155920957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 155920958 . T . PASS END=155920958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 155920959 . G . PASS END=155920959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155920960 . C . PASS END=155920960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 155920961 . C . PASS END=155920968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 155920969 . C . PASS END=155920969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 155920970 . C . PASS END=155920991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1020:0,82,255:33,0 chr1 155920992 . C . PASS END=155920992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 155920993 . A . PASS END=155921030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1062:0,80,255:32,0 chr1 155921031 . T . PASS END=155921033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 155921034 . C . PASS END=155921036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155921037 . C . PASS END=155921063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 155921274 . C . PASS END=155921324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:37:0,94,1312:0,94,255:40,0 chr1 155921532 . C . PASS END=155921547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:40,0 chr1 155921548 . A . PASS END=155921548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1214:0,76,255:34,0 chr1 155921549 . G . PASS END=155921567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:41:0,108,1535:0,110,255:40,0 chr1 155921710 . C . PASS END=155921777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,114,1710:0,126,255:40,0 chr1 155921907 . T . PASS END=155921912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 155921913 . T . PASS END=155921913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 155921914 . G . PASS END=155921928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,868:0,69,255:26,0 chr1 155921929 . G . PASS END=155921930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155921931 . T . PASS END=155921931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 155921932 . A . PASS END=155921979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:33,0 chr1 155921980 . G . PASS END=155922004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,984:0,65,255:26,0 chr1 155922005 . A . PASS END=155922005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 155922006 . G . PASS END=155922010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 155922011 . T . PASS END=155922026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 155922419 . C . PASS END=155922420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 155922421 . T . PASS END=155922421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 155922422 . C . PASS END=155922434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 155922435 . C . PASS END=155922436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 155922437 . G . PASS END=155922444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 155922445 . C . PASS END=155922445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 155922446 . G . PASS END=155922475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,931:0,64,255:26,0 chr1 155922476 . A . PASS END=155922478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 155922479 . G . PASS END=155922497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,962:0,67,255:26,0 chr1 155922498 . G . PASS END=155922573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1227:0,88,255:38,0 chr1 155922574 . T . PASS END=155922574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,987:0,63,255:27,0 chr1 155922575 . C . PASS END=155922577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:29,0 chr1 155922578 . G . PASS END=155922578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 155922579 . C . PASS END=155922583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 155922584 . G . PASS END=155922584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 155922585 . C . PASS END=155922593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 155922594 . T . PASS END=155922595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,946:0,70,255:27,0 chr1 155922596 . C . PASS END=155922597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155922598 . C . PASS END=155922619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:25,0 chr1 155924693 . T . PASS END=155924760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:37:0,80,1421:0,80,255:40,0 chr1 155927504 . G . PASS END=155927504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155927505 . T . PASS END=155927673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:29:0,80,1177:0,80,255:40,0 chr1 155928109 . A . PASS END=155928109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 155928111 . C . PASS END=155928187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1305:0,91,255:40,0 chr1 155931452 . C . PASS END=155931455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 155931456 . G . PASS END=155931457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 155931458 . A . PASS END=155931469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 155931470 . C . PASS END=155931503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,374:0,30,255:13,0 chr1 155931504 . T . PASS END=155931504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 155931505 . T . PASS END=155931547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr1 155931548 . G . PASS END=155931548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 155931549 . C . PASS END=155931550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155931551 . C . PASS END=155931558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 155931559 . T . PASS END=155931559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 155931560 . G . PASS END=155931586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:17,0 chr1 155931587 . T . PASS END=155931633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 155931634 . A . PASS END=155931665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,512:0,42,255:19,0 chr1 155931666 . T . PASS END=155931668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 155931669 . T . PASS END=155931669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 155931670 . G . PASS END=155931682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:23,0 chr1 155931683 . G . PASS END=155931683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 155931684 . G . PASS END=155931686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 155931687 . C . PASS END=155931700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,729:0,57,255:19,0 chr1 155931896 . C . PASS END=155931988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:31:0,82,1149:0,82,255:40,0 chr1 155931989 . T . PASS END=155931989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:27,0 chr1 155931990 . G . PASS END=155931990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155931991 . A . PASS END=155931991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 155931992 . G . PASS END=155931995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155931996 . G . PASS END=155931996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 155931997 . G . PASS END=155931997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 155931998 . C . PASS END=155931998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 155931999 . G . PASS END=155932006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 155932007 . T . PASS END=155932013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 155932384 . C . PASS END=155932411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 155932412 . C . PASS END=155932472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1139:0,80,255:35,0 chr1 155932473 . A . PASS END=155932474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 155932475 . G . PASS END=155932478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 155932479 . T . PASS END=155932482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr1 155932483 . C . PASS END=155932484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 155932485 . T . PASS END=155932486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 155932487 . T . PASS END=155932488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 155932489 . C . PASS END=155932509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr1 155932724 . C . PASS END=155932738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 155932739 . A . PASS END=155932739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 155932740 . T . PASS END=155932751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,768:0,63,255:25,0 chr1 155932752 . T . PASS END=155932752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 155932753 . G . PASS END=155932792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,871:0,64,255:26,0 chr1 155932793 . G . PASS END=155932931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1055:0,84,255:37,0 chr1 155932932 . A . PASS END=155932949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,1035:0,72,255:25,0 chr1 155932950 . T . PASS END=155932958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:17,0 chr1 155932959 . T . PASS END=155932959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:16,0 chr1 155932960 . C . PASS END=155932964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 155932965 . T . PASS END=155932974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:16:0,33,495:0,48,255:13,0 chr1 155934779 . C . PASS END=155934782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 155934783 . G . PASS END=155934826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:26,0 chr1 155934827 . G . PASS END=155934846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:30,0 chr1 155934847 . A . PASS END=155934847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 155934848 . G . PASS END=155934889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1022:0,83,255:32,0 chr1 155934890 . A . PASS END=155934890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,948:0,60,255:27,0 chr1 155934891 . G . PASS END=155934893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 155934894 . A . PASS END=155934904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:25,0 chr1 155934905 . C . PASS END=155934906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:26:0,57,855:0,78,255:19,0 chr1 155934907 . C . PASS END=155934922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:21,0 chr1 155935094 . C . PASS END=155935094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1311:0,108,255:36,0 chr1 155935095 . T . PASS END=155935095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:33,0 chr1 155935096 . T . PASS END=155935172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1131:0,84,255:40,0 chr1 155935173 . C . PASS END=155935173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:30,0 chr1 155935174 . A . PASS END=155935183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,89,255:30,0 chr1 155935184 . G . PASS END=155935203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:22:0,61,870:0,61,255:26,0 chr1 155935422 . C . PASS END=155935429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 155935430 . G . PASS END=155935437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 155935438 . T . PASS END=155935438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 155935439 . A . PASS END=155935446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 155935447 . T . PASS END=155935447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:27,0 chr1 155935448 . C . PASS END=155935490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1047:0,84,255:31,0 chr1 155935491 . A . PASS END=155935491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1143:0,68,255:28,0 chr1 155935492 . G . PASS END=155935492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 155935493 . G . PASS END=155935493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 155935494 . G . PASS END=155935494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 155935495 . A . PASS END=155935495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 155935496 . C . PASS END=155935506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 155935507 . T . PASS END=155935541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,847:0,62,255:26,0 chr1 155935542 . C . PASS END=155935542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 155935543 . G . PASS END=155935551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,909:0,75,255:25,0 chr1 155936207 . T . PASS END=155936207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:35,0 chr1 155936208 . C . PASS END=155936270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1365:0,84,255:39,0 chr1 155936611 . C . PASS END=155936678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,107,1526:0,107,255:40,0 chr1 155938947 . T . PASS END=155938957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,623:0,54,255:18,0 chr1 155938958 . A . PASS END=155938958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 155938959 . G . PASS END=155938965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 155938966 . C . PASS END=155938966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 155938967 . T . PASS END=155938971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 155938972 . T . PASS END=155938972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 155938973 . G . PASS END=155938988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr1 155938989 . A . PASS END=155938990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 155938991 . G . PASS END=155938994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 155938995 . A . PASS END=155938995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 155938996 . G . PASS END=155939001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:25,0 chr1 155939002 . G . PASS END=155939024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 155939025 . T . PASS END=155939027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,1 chr1 155939028 . T . PASS END=155939032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155939033 . A . PASS END=155939033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,919:0,48,255:27,0 chr1 155939034 . G . PASS END=155939037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1031:0,84,255:28,0 chr1 155939038 . C . PASS END=155939041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155939042 . T . PASS END=155939042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155939043 . T . PASS END=155939043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr1 155939044 . G . PASS END=155939066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:26,0 chr1 155939067 . C . PASS END=155939072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:20,0 chr1 155939073 . T . PASS END=155939080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 155939081 . T . PASS END=155939081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 155939082 . T . PASS END=155939086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 155939087 . C . PASS END=155939091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:18,0 chr1 155939325 . C . PASS END=155939343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1116:0,87,255:32,0 chr1 155939344 . T . PASS END=155939344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 155939345 . G . PASS END=155939363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1157:0,93,255:32,0 chr1 155939944 . C . PASS END=155939951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,104,1598:0,104,255:40,0 chr1 155939952 . T . PASS END=155939952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1574:0,72,255:40,0 chr1 155939953 . C . PASS END=155939994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,134,255:40,0 chr1 155948156 . C . PASS END=155948157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 155948158 . T . PASS END=155948158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155948159 . G . PASS END=155948165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155948166 . A . PASS END=155948184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,535:0,31,255:13,0 chr1 155948185 . T . PASS END=155948186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr1 155948187 . C . PASS END=155948187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155948188 . G . PASS END=155948188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,421:0,11,255:13,0 chr1 155948189 . C . PASS END=155948189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 155948190 . G . PASS END=155948190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr1 155948191 . C . PASS END=155948192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 155948193 . C . PASS END=155948193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155948194 . G . PASS END=155948194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:12,0 chr1 155948195 . C . PASS END=155948195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155948196 . G . PASS END=155948196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,413:0,3,255:12,0 chr1 155948197 . T . PASS END=155948203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 155948204 . T . PASS END=155948204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 155948205 . T . PASS END=155948208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 155948209 . T . PASS END=155948210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 155948211 . C . PASS END=155948216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 155948217 . A . LowGQ END=155948217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 155948218 . T . PASS END=155948218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 155949302 . A . PASS END=155949313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,105,1574:0,105,255:40,0 chr1 155952898 . C . PASS END=155952988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1260:0,96,255:40,0 chr1 155952989 . C . PASS END=155952991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,80,255:26,0 chr1 155954185 . C . PASS END=155954224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:37,0 chr1 155955123 . C . PASS END=155955126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 155955127 . T . PASS END=155955127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:28,0 chr1 155955128 . G . PASS END=155955240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:33:0,89,1294:0,89,255:40,0 chr1 155959025 . C . PASS END=155959078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1156:0,90,255:40,0 chr1 155959079 . T . PASS END=155959079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:34,0 chr1 155959080 . T . PASS END=155959142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1350:0,98,255:39,0 chr1 155960632 . G . PASS END=155960647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 155960648 . C . PASS END=155960648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 155960649 . G . PASS END=155960683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr1 155960684 . A . PASS END=155960684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 155960685 . G . PASS END=155960706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:23,0 chr1 155960707 . G . PASS END=155960722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:18,0 chr1 155960723 . G . PASS END=155960723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 155960724 . A . PASS END=155960726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 155960727 . T . PASS END=155960728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 155960729 . T . PASS END=155960729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 155960730 . G . PASS END=155960743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:12,0 chr1 155960744 . T . PASS END=155960744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 155960745 . G . PASS END=155960745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155960746 . C . LowGQ END=155960746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:9,0 chr1 155960747 . G . PASS END=155960751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155960752 . A . PASS END=155960752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 155960753 . T . PASS END=155960753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 155973434 . C . PASS END=155973441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 155973442 . C . PASS END=155973442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 155973443 . T . PASS END=155973461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:17,0 chr1 155973462 . A . PASS END=155973462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 155973463 . G . PASS END=155973509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,615:0,40,255:19,0 chr1 155973510 . C . PASS END=155973520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 155976722 . C . PASS END=155976726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 155976727 . A . PASS END=155976727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 155976728 . C . PASS END=155976728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 155976729 . C . PASS END=155976729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 155976730 . T . PASS END=155976734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 155976735 . A . PASS END=155976735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 155976736 . G . PASS END=155976791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 155976792 . T . PASS END=155976802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:15:0,35,585:0,35,255:13,0 chr1 155976803 . G . PASS END=155976820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr1 155976821 . T . PASS END=155976822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 155976823 . C . PASS END=155976826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155976827 . T . PASS END=155976827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 155976828 . C . PASS END=155976828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 155976829 . A . PASS END=155976830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 155979331 . T . PASS END=155979441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1105:0,83,255:40,0 chr1 155981601 . A . PASS END=155981612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:48:0,115,1734:0,115,255:40,0 chr1 155981613 . G . PASS END=155981613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:43:55:0,43,1546:0,43,255:40,0 chr1 155981614 . A . PASS END=155981615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 155981616 . T . PASS END=155981616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,8:54:29:54:0,29,1419:0,29,255:40,0 chr1 155981617 . C . PASS END=155981617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 155981618 . G . PASS END=155981618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:79:54:0,79,1548:0,79,255:40,0 chr1 155981619 . C . PASS END=155981678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,117,1741:0,117,255:40,0 chr1 155982318 . T . PASS END=155982319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 155982320 . A . PASS END=155982321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 155982322 . C . PASS END=155982322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 155982323 . T . PASS END=155982333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 155982334 . A . PASS END=155982338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 155982339 . A . PASS END=155982356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 155984752 . C . PASS END=155984753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 155984754 . C . PASS END=155984756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 155984757 . C . PASS END=155984757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr1 155984758 . G . PASS END=155984762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 155984763 . C . PASS END=155984763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 155984764 . A . PASS END=155984764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr1 155984765 . T . PASS END=155984776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1105:0,83,255:33,0 chr1 155984777 . A . PASS END=155984777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1169:0,47,255:32,0 chr1 155984778 . G . PASS END=155984807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1227:0,88,255:35,0 chr1 155984808 . A . PASS END=155984808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:32,0 chr1 155984809 . A . PASS END=155984828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1239:0,89,255:35,0 chr1 155984829 . G . PASS END=155984848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:26,0 chr1 155984849 . A . PASS END=155984849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,590:0,16,255:18,0 chr1 155984850 . C . PASS END=155984852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 155984853 . T . PASS END=155984860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 155988043 . C . PASS END=155988044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1288:0,102,255:34,0 chr1 155988045 . A . PASS END=155988045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1013:0,68,255:31,0 chr1 155988046 . G . PASS END=155988150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1209:0,86,255:40,0 chr1 155988151 . A . PASS END=155988159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:29:0,66,1061:0,66,255:26,0 chr1 155989024 . T . PASS END=155989057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,117,1755:0,120,255:40,0 chr1 155989804 . C . PASS END=155989958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1094:0,89,255:40,0 chr1 155990057 . C . PASS END=155990137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:46:0,101,1787:0,101,255:40,0 chr1 155990679 . C . PASS END=155990680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 155990681 . T . PASS END=155990681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 155990682 . T . PASS END=155990692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1188:0,96,255:32,0 chr1 155990693 . A . PASS END=155990693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1026:0,79,255:28,0 chr1 155990694 . C . PASS END=155990730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:31,0 chr1 155990731 . A . PASS END=155990731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 155990732 . G . PASS END=155990735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 156003023 . C . PASS END=156003025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 156003026 . A . PASS END=156003026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,691:0,49,255:21,0 chr1 156003027 . T . PASS END=156003067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,800:0,66,255:25,0 chr1 156006769 . T . PASS END=156006776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:25,0 chr1 156006777 . G . PASS END=156006788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1048:0,84,255:29,0 chr1 156006789 . G . PASS END=156006789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 156006790 . C . PASS END=156006808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1012:0,90,255:32,0 chr1 156006809 . T . PASS END=156006809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:30,0 chr1 156006810 . T . PASS END=156006847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1202:0,83,255:36,0 chr1 156006848 . G . PASS END=156006848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:32,0 chr1 156006849 . C . PASS END=156006860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1086:0,89,255:35,0 chr1 156006861 . T . PASS END=156006861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:33,0 chr1 156006862 . G . PASS END=156006891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:30:0,84,1254:0,89,255:37,0 chr1 156006892 . C . PASS END=156006892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 156006893 . T . PASS END=156006896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156006897 . G . PASS END=156006897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 156006898 . A . PASS END=156006901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 156006902 . C . PASS END=156006907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:27,0 chr1 156006908 . T . PASS END=156006908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:23,0 chr1 156006909 . C . PASS END=156006921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,830:0,61,255:24,0 chr1 156011276 . C . PASS END=156011278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156011279 . T . PASS END=156011279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:14,0 chr1 156011280 . G . PASS END=156011280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156011281 . A . PASS END=156011281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156011282 . G . PASS END=156011300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 156011301 . A . PASS END=156011301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 156011302 . G . PASS END=156011336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,574:0,44,255:19,0 chr1 156011337 . C . PASS END=156011352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 156011353 . G . PASS END=156011353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 156011354 . A . PASS END=156011359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 156011360 . T . PASS END=156011370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,714:0,46,255:19,0 chr1 156011371 . T . PASS END=156011385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,776:0,66,255:22,0 chr1 156011386 . T . PASS END=156011389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156011390 . G . PASS END=156011390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156011391 . G . PASS END=156011391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156011392 . C . PASS END=156011393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156011394 . T . PASS END=156011398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,53,255:19,0 chr1 156011399 . C . PASS END=156011401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 156011402 . A . PASS END=156011406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr1 156011407 . C . PASS END=156011443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 156011444 . T C, 49.87 PASS DP=17;MQ=185.84;MQRankSum=-0.818;ReadPosRankSum=0.914;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:5,6,0:4,2,0:48:85,0,50,277,322,599:251,0,255:8,0:4.9874e+01,6.6527e-05,5.3000e+01,2.7691e+02,3.5668e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,4,4:6,3,2,6 chr1 156011445 . A . PASS END=156011458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr1 156011459 . A . PASS END=156011459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 156011460 . A . PASS END=156011462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 156011663 . C . PASS END=156011676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1027:0,87,255:31,0 chr1 156011677 . A . PASS END=156011677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr1 156011678 . G . PASS END=156011776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:31:0,90,1127:0,93,255:40,0 chr1 156011777 . A . PASS END=156011777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr1 156011778 . T . PASS END=156011778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 156011944 . C . PASS END=156011944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156011945 . T . PASS END=156011945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 156011946 . G . PASS END=156011956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 156011957 . A . PASS END=156011958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 156011959 . T . PASS END=156011959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 156011960 . G . PASS END=156011960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 156011961 . G . PASS END=156011985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,876:0,66,255:24,0 chr1 156011986 . C . PASS END=156011987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156011988 . G . PASS END=156011996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 156011997 . T . PASS END=156011997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 156011998 . C . PASS END=156012004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156012005 . A . PASS END=156012007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156012008 . A . PASS END=156012008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156012009 . G . PASS END=156012011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 156012012 . G . PASS END=156012014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156012015 . C . PASS END=156012015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 156012016 . A . PASS END=156012016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156012017 . T . PASS END=156012017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 156012018 . T . PASS END=156012019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156012020 . A . PASS END=156012020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 156012021 . C . PASS END=156012027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:25,0 chr1 156012151 . T . PASS END=156012168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:51:0,104,1800:0,104,255:40,0 chr1 156012565 . C . PASS END=156012704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:94:37:0,94,1064:0,94,255:40,0 chr1 156013789 . C . PASS END=156013793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:23,0 chr1 156013794 . C . PASS END=156013794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156013795 . C . PASS END=156013805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:26,0 chr1 156013806 . G . PASS END=156013809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156013810 . T . PASS END=156013810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 156013811 . G . PASS END=156013818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1133:0,80,255:31,0 chr1 156013819 . A . PASS END=156013819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,802:0,21,255:28,0 chr1 156013820 . G . PASS END=156013828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156013829 . G . PASS END=156013829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 156013830 . A . PASS END=156013841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 156013842 . A . PASS END=156013842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 156013843 . C . PASS END=156013858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1060:0,93,255:31,0 chr1 156013859 . T . PASS END=156013859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156013860 . C . PASS END=156013871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:28,0 chr1 156013872 . T . PASS END=156013903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 156013904 . G . PASS END=156013906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156013907 . C . PASS END=156013907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 156013908 . G . PASS END=156013908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156013909 . A . PASS END=156013909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 156013910 . G . PASS END=156013916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 156013917 . C . PASS END=156013917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 156013918 . A . PASS END=156013923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1185:0,80,255:29,0 chr1 156013924 . T . PASS END=156013924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 156013925 . A . PASS END=156013925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 156013926 . G . PASS END=156013931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr1 156013932 . G . PASS END=156013932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 156013933 . G . PASS END=156013934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 156013935 . T . PASS END=156013935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr1 156013936 . C . PASS END=156013941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 156013942 . T . PASS END=156013942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,898:0,76,255:28,0 chr1 156013943 . C . PASS END=156013948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 156013949 . C . PASS END=156013949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 156013950 . C . PASS END=156013951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156013952 . C . PASS END=156013952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 156013953 . A . PASS END=156013953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:23,0 chr1 156013954 . G . PASS END=156013956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156013957 . G . PASS END=156013960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156013961 . G . PASS END=156013983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,886:0,61,255:26,0 chr1 156013984 . C . PASS END=156013984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:23,0 chr1 156013985 . G . PASS END=156013999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:25,0 chr1 156014000 . G . PASS END=156014000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr1 156014001 . G . PASS END=156014013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,870:0,61,255:25,0 chr1 156014014 . A . PASS END=156014014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 156018292 . C . PASS END=156018298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1255:0,89,255:33,0 chr1 156018299 . C . PASS END=156018299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 156018300 . G . PASS END=156018450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,99,1418:0,101,255:40,0 chr1 156020082 . C . PASS END=156020251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:36:0,92,1332:0,92,255:40,0 chr1 156020252 . A . PASS END=156020252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:32,0 chr1 156020253 . C . PASS END=156020262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:34,0 chr1 156020263 . C . PASS END=156020270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr1 156020271 . C . PASS END=156020289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 156020290 . A . PASS END=156020290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 156020291 . A . PASS END=156020298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 156020299 . G . PASS END=156020302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 156020303 . C . PASS END=156020309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:17,0 chr1 156020310 . T . PASS END=156020310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:16,0 chr1 156020311 . A . PASS END=156020318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:18,0 chr1 156020319 . C . PASS END=156020344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 156020901 . A . PASS END=156020916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr1 156020917 . A . PASS END=156020929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 156020930 . C . PASS END=156020930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 156020931 . C . PASS END=156020941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:9,0 chr1 156020942 . C . PASS END=156020946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 156020947 . A . PASS END=156020947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 156020948 . G . PASS END=156020951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 156020952 . G . PASS END=156020955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156020956 . C . PASS END=156020956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 156020957 . C . PASS END=156020962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156020963 . C . PASS END=156020970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 156020971 . C . PASS END=156020971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 156020972 . C . PASS END=156020980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 156020981 . C . PASS END=156020981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 156020982 . T . PASS END=156020996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:12,0 chr1 156020997 . A . PASS END=156020997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 156020998 . G . PASS END=156021001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 156021002 . C . PASS END=156021002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 156021003 . T . PASS END=156021005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:18,0 chr1 156021006 . C . PASS END=156021007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 156021008 . G . PASS END=156021008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 156021009 . A . PASS END=156021009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 156021010 . G . PASS END=156021018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156021019 . C . PASS END=156021020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,582:0,34,255:16,0 chr1 156021021 . G . PASS END=156021021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 156021022 . G . PASS END=156021022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 156021023 . G . PASS END=156021024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr1 156021025 . A . PASS END=156021025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 156021026 . G . PASS END=156021026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156021027 . G . PASS END=156021027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 156021028 . G . PASS END=156021034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,623:0,57,255:19,0 chr1 156021035 . G . PASS END=156021036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156021037 . T . PASS END=156021044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 156021045 . G . PASS END=156021045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156021046 . C . PASS END=156021046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156021047 . G . PASS END=156021082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:24,0 chr1 156021083 . G . PASS END=156021083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 156021084 . G . PASS END=156021088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156021089 . G . PASS END=156021089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156021090 . A . PASS END=156021091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,68,255:22,0 chr1 156021092 . G . PASS END=156021092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156021093 . C . PASS END=156021102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 156021103 . A . PASS END=156021103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156021104 . G . PASS END=156021105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 156021106 . T . PASS END=156021106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156021107 . G . PASS END=156021118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr1 156021497 . T . PASS END=156021648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1258:0,84,255:40,0 chr1 156023385 . C . PASS END=156023386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 156023387 . C . PASS END=156023387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 156023388 . C . PASS END=156023388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 156023389 . T . PASS END=156023389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 156023390 . T . PASS END=156023392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 156023393 . C . PASS END=156023393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,485:0,1,255:14,0 chr1 156023394 . C . PASS END=156023394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 156023395 . G . PASS END=156023396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 156023397 . G . PASS END=156023398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 156023399 . C . PASS END=156023399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 156023400 . T . PASS END=156023400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:16,0 chr1 156023401 . C . PASS END=156023401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 156023402 . G . PASS END=156023402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 156023403 . A . PASS END=156023403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 156023404 . T . PASS END=156023404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 156023405 . C . PASS END=156023405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 156023406 . G . PASS END=156023407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 156023408 . A . PASS END=156023408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 156023409 . G . PASS END=156023409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 156023410 . A . PASS END=156023410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:15,0 chr1 156023411 . T . PASS END=156023413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,576:0,51,255:17,0 chr1 156023414 . C . PASS END=156023414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156023415 . A . PASS END=156023415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023416 . A . PASS END=156023417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 156023418 . T . PASS END=156023418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023419 . T . PASS END=156023419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 156023420 . C . PASS END=156023420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:14,0 chr1 156023421 . C . PASS END=156023421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023422 . T . PASS END=156023422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:14,0 chr1 156023423 . C . PASS END=156023423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,490:0,4,255:14,0 chr1 156023424 . C . PASS END=156023424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023425 . T . PASS END=156023425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 156023426 . T . PASS END=156023426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,443:0,18,255:15,0 chr1 156023427 . G . PASS END=156023427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023428 . T . PASS END=156023428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 156023429 . C . PASS END=156023431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr1 156023432 . T . PASS END=156023432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023433 . G . PASS END=156023433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 156023434 . G . PASS END=156023441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023442 . G . PASS END=156023442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 156023443 . A . PASS END=156023443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156023444 . C . PASS END=156023444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 156023445 . G . PASS END=156023445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,490:0,4,255:14,0 chr1 156023446 . G . PASS END=156023446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156023447 . T . PASS END=156023447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:16,0 chr1 156023448 . G . PASS END=156023448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,1 chr1 156023449 . A . PASS END=156023449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 156023450 . C . LowGQ END=156023450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:13,0 chr1 156023451 . C . PASS END=156023452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156023453 . G . LowGQ END=156023453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:14,0 chr1 156023454 . A . PASS END=156023454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 156023455 . A . PASS END=156023455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156023456 . T . PASS END=156023456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 156023457 . G . PASS END=156023462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156023463 . C . PASS END=156023463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:10,0 chr1 156023464 . C . PASS END=156023464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:12,0 chr1 156023465 . T . LowGQ END=156023465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,402:2,0,255:9,0 chr1 156023466 . C . PASS END=156023466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:11,0 chr1 156023467 . G . LowGQ END=156023467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,449:21,0,255:10,0 chr1 156023468 . T . PASS END=156023473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:24:16:0,24,360:0,31,255:8,0 chr1 156023474 . C . LowGQ END=156023474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,480:7,0,255:7,0 chr1 156023475 . C . PASS END=156023477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:7,0 chr1 156023478 . G . LowGQ END=156023479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,255:0,0,255:7,0 chr1 156023480 . T . PASS END=156023484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:12:11:0,12,180:0,16,255:7,0 chr1 156023485 . T . LowGQ END=156023492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:0:7:0,0,135:0,0,151:3,0 chr1 156024681 . A . PASS END=156024705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 156024706 . A . PASS END=156024706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:21,0 chr1 156024707 . G . PASS END=156024718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 156024719 . A . PASS END=156024719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 156024720 . G . PASS END=156024722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156024723 . A . PASS END=156024724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156024725 . C . PASS END=156024728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 156024729 . G . PASS END=156024748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 156025054 . G . PASS END=156025058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:33,0 chr1 156025059 . T . PASS END=156025064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1189:0,86,255:33,0 chr1 156025065 . A . PASS END=156025065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1147:0,47,255:30,0 chr1 156025066 . C . PASS END=156025095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:34:0,80,1218:0,80,255:40,0 chr1 156025096 . C T, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.923;ReadPosRankSum=4.478;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,25,0:0.521,0.000:48:10,15,0:13,10,0:48:85,0,50,865,815,1680:255,0,255:21,0:5.0000e+01,6.5751e-05,5.2877e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,12,13:12,11,10,15 chr1 156025097 . G . PASS END=156025133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,128,255:40,0 chr1 156025134 . G . PASS END=156025213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:34:0,82,1287:0,82,255:40,0 chr1 156025214 . A . PASS END=156025216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:22,0 chr1 156027769 . G . PASS END=156027858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,105,1575:0,125,255:40,0 chr1 156028069 . G . PASS END=156028077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1102:0,87,255:36,0 chr1 156028078 . G . PASS END=156028078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:35,0 chr1 156028079 . G . PASS END=156028178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:38:0,98,1366:0,98,255:40,0 chr1 156028179 . T . PASS END=156028179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:36,0 chr1 156028180 . G . PASS END=156028200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1350:0,94,255:35,0 chr1 156031192 . A . PASS END=156031234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1482:0,102,255:40,0 chr1 156035702 . T . PASS END=156035702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 156035703 . G . PASS END=156035705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 156035706 . G . PASS END=156035707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 156035708 . T . PASS END=156035711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 156035712 . C . PASS END=156035712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr1 156035713 . G . PASS END=156035814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:30:0,86,1093:0,86,255:40,0 chr1 156035815 . A . PASS END=156035815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:30,0 chr1 156035816 . C . PASS END=156035845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1305:0,89,255:34,0 chr1 156035846 . C . PASS END=156035846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 156035847 . T . PASS END=156035850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 156035851 . A . PASS END=156035851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1005:0,54,255:28,0 chr1 156035852 . T . PASS END=156035860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 156035861 . C . PASS END=156035861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 156035862 . A . PASS END=156035864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156035865 . T . PASS END=156035872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 156035873 . A . PASS END=156035873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:19,0 chr1 156035874 . G . PASS END=156035881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,68,255:21,0 chr1 156035882 . G . PASS END=156035882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 156035883 . A . PASS END=156035884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156035885 . C . PASS END=156035886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:50:22:0,50,790:0,50,255:21,0 chr1 156035887 . A . PASS END=156035889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 156035890 . A . PASS END=156035896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 156035897 . C . PASS END=156035897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:15,0 chr1 156038061 . G . PASS END=156038071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:26,0 chr1 156038072 . G . PASS END=156038082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,964:0,84,255:31,0 chr1 156038083 . G . PASS END=156038083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 156038084 . C . PASS END=156038084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 156038085 . C . PASS END=156038085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 156038086 . C . PASS END=156038248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1166:0,83,255:39,0 chr1 156038249 . T . PASS END=156038254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr1 156039462 . A . PASS END=156039542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,120,1800:0,135,255:40,0 chr1 156039951 . A . PASS END=156039951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 156039952 . A . PASS END=156039952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 156039953 . A . PASS END=156039953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 156039954 . T . PASS END=156039970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,971:0,87,255:30,0 chr1 156039971 . A . PASS END=156039972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1062:0,74,255:29,0 chr1 156039973 . G . PASS END=156039975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156039976 . G . PASS END=156039976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 156039977 . A . PASS END=156039982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:31:0,86,1180:0,86,255:33,0 chr1 156039983 . A . PASS END=156039983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 156039984 . A . PASS END=156039992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1243:0,102,255:35,0 chr1 156039993 . G . PASS END=156039993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1140:0,72,255:33,0 chr1 156039994 . G . PASS END=156040032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1255:0,86,255:36,0 chr1 156040033 . G . PASS END=156040033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:28,0 chr1 156040034 . G . PASS END=156040038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156040039 . T . PASS END=156040067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:26,0 chr1 156040068 . T . PASS END=156040071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 156040072 . C . PASS END=156040073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156040074 . T . PASS END=156040078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 156046365 . T . PASS END=156046365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 156046366 . T . PASS END=156046366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 156046367 . A . PASS END=156046443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,845:0,66,255:26,0 chr1 156046444 . A . PASS END=156046446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:27,0 chr1 156046447 . G . PASS END=156046447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 156046448 . C . PASS END=156046448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 156046449 . A . PASS END=156046474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,922:0,72,255:26,0 chr1 156046475 . C . PASS END=156046475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 156046476 . G . PASS END=156046476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 156046477 . C . PASS END=156046478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156046479 . G . PASS END=156046504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 156046505 . T . PASS END=156046505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,654:0,49,255:20,0 chr1 156046506 . C . PASS END=156046510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156046511 . A . PASS END=156046530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 156046531 . C . PASS END=156046531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 156046532 . C . PASS END=156046559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 156046560 . A . PASS END=156046560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 156046561 . C . PASS END=156046561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156046562 . C . PASS END=156046563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156046564 . A . PASS END=156046564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr1 156046565 . G . PASS END=156046576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,454:0,42,255:14,0 chr1 156046577 . C . PASS END=156046588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 156046589 . C . PASS END=156046591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156046592 . C . PASS END=156046592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:13,0 chr1 156046593 . C . PASS END=156046626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,620:0,45,255:16,0 chr1 156046627 . C . PASS END=156046627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:13,0 chr1 156046628 . C . PASS END=156046633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 156046634 . A . PASS END=156046636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156046637 . T . PASS END=156046637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 156046638 . G . PASS END=156046685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,613:0,44,255:19,0 chr1 156046686 . A . PASS END=156046686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,2 chr1 156046687 . G . LowGQ END=156046689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,545:9,0,255:18,2 chr1 156046690 . G . PASS END=156046690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:20,0 chr1 156046691 . A . PASS END=156046703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 156046704 . G . PASS END=156046744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,674:0,43,255:19,0 chr1 156046745 . G . PASS END=156046798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:23,0 chr1 156046799 . T . PASS END=156046799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 156046800 . G . PASS END=156046815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,900:0,72,255:26,0 chr1 156046816 . G . PASS END=156046816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr1 156046817 . G . PASS END=156046839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:25,0 chr1 156046840 . A . PASS END=156046840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 156046841 . A . PASS END=156046852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 156046853 . G . PASS END=156046853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:21,0 chr1 156046854 . C . PASS END=156046860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 156046861 . A . PASS END=156046861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 156046862 . G . PASS END=156046867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:23,0 chr1 156046868 . G . PASS END=156046868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 156046869 . G . PASS END=156046874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 156046875 . A . PASS END=156046875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 156046876 . A . PASS END=156046889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 156046890 . T . PASS END=156046892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156046893 . G . PASS END=156046959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,908:0,72,255:26,0 chr1 156046960 . A . PASS END=156046960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 156046961 . C . PASS END=156046967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 156046968 . G . PASS END=156046971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 156046972 . T . PASS END=156046995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 156046996 . G . PASS END=156046996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 156046997 . C . PASS END=156046998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156046999 . T . PASS END=156047011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 156047012 . C . PASS END=156047014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156047015 . G . PASS END=156047064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,44,255:19,0 chr1 156047065 . A . PASS END=156047072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 156047073 . C . PASS END=156047074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156047075 . C . PASS END=156047075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 156047076 . G . PASS END=156047078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156047079 . C . PASS END=156047079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156047080 . T . PASS END=156047089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,44,255:16,0 chr1 156047090 . C . PASS END=156047090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 156047091 . A . PASS END=156047128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 156047129 . C . PASS END=156047129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 156047130 . G . PASS END=156047141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr1 156047142 . A . PASS END=156047142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:18,0 chr1 156047143 . C . PASS END=156047164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr1 156047165 . T . PASS END=156047165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:18,0 chr1 156047166 . G . PASS END=156047169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,660:0,44,255:19,0 chr1 156047170 . G . PASS END=156047187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,640:0,60,255:21,0 chr1 156047188 . T . PASS END=156047188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 156047189 . T . PASS END=156047197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,725:0,63,255:21,0 chr1 156047198 . C . PASS END=156047198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156047199 . C . PASS END=156047211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 156047212 . A . PASS END=156047212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156047213 . C . PASS END=156047222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 156047223 . C . PASS END=156047224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156047225 . C . PASS END=156047259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 156047260 . T . PASS END=156047260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 156047261 . G . PASS END=156047275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 156047276 . G . PASS END=156047278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156047279 . C . PASS END=156047282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156047283 . A . PASS END=156047284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156047285 . C . PASS END=156047286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr1 156047287 . A . PASS END=156047287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156047288 . A . PASS END=156047288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,911:0,56,255:27,0 chr1 156047289 . G . PASS END=156047295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 156047296 . C . PASS END=156047296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 156047297 . C . PASS END=156047387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:29:0,80,1056:0,80,255:35,0 chr1 156047388 . T . PASS END=156047388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr1 156047389 . G . PASS END=156047403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:35,0 chr1 156047404 . G . PASS END=156047404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:32,0 chr1 156047405 . G . PASS END=156047426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1157:0,82,255:35,0 chr1 156047427 . C . PASS END=156047427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:30,0 chr1 156047428 . T . PASS END=156047430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 156047431 . A . PASS END=156047447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:24:0,62,870:0,62,255:26,0 chr1 156047448 . G . PASS END=156047448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 156047449 . G . PASS END=156047462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 156047463 . A . PASS END=156047463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 156047464 . A . PASS END=156047465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156047466 . C . PASS END=156047466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 156047467 . T . PASS END=156047469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156047470 . C . PASS END=156047473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,753:0,49,255:17,0 chr1 156051336 . C . PASS END=156051349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 156051350 . A . PASS END=156051353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 156051354 . C . PASS END=156051354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 156051355 . G . PASS END=156051428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,374:0,33,255:13,0 chr1 156051429 . C . PASS END=156051465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 156051466 . T . LowGQ END=156051466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,216:17,0,233:8,0 chr1 156051467 . T . PASS END=156051467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr1 156051468 . T . PASS END=156051476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156051477 . T . PASS END=156051477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 156051478 . G . PASS END=156051478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156051479 . G . PASS END=156051487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 156051488 . G . PASS END=156051496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:7:0,10,180:0,10,255:5,0 chr1 156051497 . G . LowGQ END=156051503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,90:0,0,118:2,0 chr1 156051504 . G . LowDepth;LowGQ END=156051565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 156051566 . G . PASS END=156051591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr1 156051592 . C . PASS END=156051642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 156051643 . A . PASS END=156051664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:13,0 chr1 156051665 . A . PASS END=156051666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 156051667 . A . PASS END=156051667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:13,0 chr1 156051668 . G . PASS END=156051688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr1 156051689 . T . PASS END=156051689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 156051690 . C . PASS END=156051771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,631:0,44,255:19,0 chr1 156051772 . T . PASS END=156051789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:11:0,33,426:0,33,255:12,0 chr1 156084484 . C . PASS END=156084485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 156084487 . C . PASS END=156084487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 156084500 . T . PASS END=156084500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 156084527 . C . PASS END=156084527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156084568 . C . PASS END=156084568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 156084572 . T . PASS END=156084572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 156084601 . G . PASS END=156084601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 156084648 . C . PASS END=156084648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156084666 . T . PASS END=156084666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 156084698 . A . PASS END=156084698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 156084705 . C . PASS END=156084706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 156084709 . C . PASS END=156084714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 156084715 . G . PASS END=156084715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 156084716 . A . PASS END=156084716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156084717 . C . PASS END=156084725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 156084726 . A . PASS END=156084726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:17,0 chr1 156084727 . G . PASS END=156084727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 156084728 . C . PASS END=156084728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:17,0 chr1 156084729 . G . PASS END=156084740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 156084741 . G . PASS END=156084741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 156084742 . C . PASS END=156084754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:19,0 chr1 156084755 . G . PASS END=156084755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 156084756 . C . PASS END=156084758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 156084759 . G . PASS END=156084772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,856:0,61,255:24,0 chr1 156084773 . T . PASS END=156084773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 156084774 . C . PASS END=156084779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:26,0 chr1 156084780 . C . PASS END=156084796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:29,0 chr1 156084797 . C . PASS END=156084856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,847:0,62,255:26,0 chr1 156084857 . C . PASS END=156084857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 156084858 . G . PASS END=156084867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr1 156084868 . A . PASS END=156084868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 156084869 . A . PASS END=156084880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,901:0,64,255:26,0 chr1 156084881 . G . PASS END=156084891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 156084892 . T . PASS END=156084892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:28,0 chr1 156084893 . C . PASS END=156084897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 156084898 . C . PASS END=156084900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1064:0,76,255:26,0 chr1 156084901 . C . PASS END=156084902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 156084903 . A . PASS END=156084909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,80,255:26,0 chr1 156084910 . A . PASS END=156084911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156084912 . A . PASS END=156084913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 156084914 . G . PASS END=156084918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 156084919 . C . PASS END=156084946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,917:0,75,255:26,0 chr1 156084947 . G . PASS END=156084988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1039:0,84,255:32,0 chr1 156084989 . T . PASS END=156084989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr1 156084990 . C . PASS END=156084998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:30,0 chr1 156084999 . A . PASS END=156084999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 156085000 . G . PASS END=156085004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 156085005 . G . PASS END=156085006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 156085007 . G . PASS END=156085007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 156085008 . C . PASS END=156085013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 156085014 . T . PASS END=156085028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:24,0 chr1 156085029 . G . PASS END=156085062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,46,255:21,0 chr1 156085063 . G . PASS END=156085063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156085064 . C . PASS END=156085066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 156085070 . G . PASS END=156085070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156085077 . C . PASS END=156085077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 156095995 . A . PASS END=156096014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,128,255:40,0 chr1 156096527 . A . PASS END=156096527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 156096528 . T . PASS END=156096528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,997:0,71,255:28,0 chr1 156096529 . T . PASS END=156096532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1005:0,87,255:30,0 chr1 156096533 . C . PASS END=156096533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 156096534 . A . PASS END=156096534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:30,0 chr1 156096535 . G . PASS END=156096535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1024:0,46,255:29,0 chr1 156096536 . T . PASS END=156096537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1066:0,93,255:31,0 chr1 156096538 . A . PASS END=156096538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:29,0 chr1 156096539 . T . PASS END=156096542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 156096543 . A . PASS END=156096544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,956:0,60,255:30,0 chr1 156096545 . G . PASS END=156096545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 156096546 . A . PASS END=156096546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 156096547 . G . PASS END=156096551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 156096594 . A . PASS END=156096694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1169:0,80,255:40,0 chr1 156096695 . A . PASS END=156096710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 156099641 . A . PASS END=156099668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1069:0,83,255:34,0 chr1 156099669 . T G, 149.33 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:99:187,102,0,1310,102,1310:255,102,0:0,0:1.4933e+02,9.9327e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,14:0,0,23,11 chr1 156099670 . G . PASS END=156099699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr1 156100406 . A . PASS END=156100406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 156100408 . C . PASS END=156100415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr1 156100416 . A . PASS END=156100416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,919:0,56,255:28,0 chr1 156100417 . G . PASS END=156100486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1072:0,80,255:34,0 chr1 156100487 . G . PASS END=156100489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1170:0,66,255:29,0 chr1 156100490 . G . PASS END=156100490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1172:0,58,255:25,0 chr1 156100491 . C . PASS END=156100500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:31:0,63,945:0,93,255:26,0 chr1 156100501 . T . PASS END=156100501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:38:29:0,38,959:0,38,255:20,0 chr1 156100502 . G . PASS END=156100511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 156100512 . A . PASS END=156100512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 156100513 . G . PASS END=156100513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 156100514 . A . PASS END=156100514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 156100515 . A . PASS END=156100538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 156100539 . A . PASS END=156100539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156100540 . T . PASS END=156100566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 156100570 . G . PASS END=156100570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156100576 . C . PASS END=156100576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 156100609 . T . PASS END=156100609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156104183 . C . PASS END=156104183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr1 156104194 . C . PASS END=156104320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:92:36:0,92,1332:0,92,255:40,0 chr1 156104328 . T . PASS END=156104328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 156104544 . C . PASS END=156104544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 156104585 . A . PASS END=156104586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,117,1755:0,126,255:39,0 chr1 156104594 . A . PASS END=156104594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 156104596 . G . PASS END=156104739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:31:0,81,1215:0,93,255:40,0 chr1 156104740 . G . PASS END=156104741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156104742 . G . PASS END=156104758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156104759 . C . PASS END=156104767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 156104770 . C . PASS END=156104770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156104965 . T . PASS END=156104965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 156104977 . G . PASS END=156104990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 156104991 . G . PASS END=156104991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156104992 . G . PASS END=156105027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 156105028 . T C, 77.11 PASS DP=10;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,5,0:0,5,0:27:115,30,0,388,30,388:255,30,0:0,0:7.7106e+01,2.7106e+01,8.4680e-03,3.8474e+02,6.1876e+01,3.8774e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,7:0,0,6,4 chr1 156105029 . G . PASS END=156105058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr1 156105059 . C . PASS END=156105065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 156105066 . A . PASS END=156105083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 156105084 . T . PASS END=156105084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 156105085 . C . PASS END=156105102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 156105103 . G . PASS END=156105105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 156105115 . C . PASS END=156105115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 156105652 . G . PASS END=156105655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 156105656 . C . PASS END=156105665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 156105666 . C . PASS END=156105666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 156105667 . A . PASS END=156105679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:47:16:0,47,404:0,47,255:16,0 chr1 156105680 . A . LowGQ END=156105680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,341:2,0,255:13,0 chr1 156105681 . C . PASS END=156105686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,548:0,51,255:18,0 chr1 156105687 . T . LowGQ END=156105687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,313:13,0,255:14,0 chr1 156105688 . T . PASS END=156105690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,562:0,54,255:18,0 chr1 156105691 . G . PASS END=156105691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,452:0,21,255:16,0 chr1 156105692 . C . PASS END=156105692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,599:0,54,255:18,0 chr1 156105693 . T . PASS END=156105693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,468:0,21,255:16,0 chr1 156105694 . G . PASS END=156105696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,609:0,54,255:18,0 chr1 156105697 . A . PASS END=156105697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:20:18:0,20,446:0,20,255:15,0 chr1 156105698 . G . PASS END=156105698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr1 156105699 . C . PASS END=156105700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156105701 . A . LowGQ END=156105701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,360:10,0,255:15,0 chr1 156105702 . A . PASS END=156105704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 156105705 . A . LowGQ END=156105705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,388:13,0,255:13,0 chr1 156105706 . G . PASS END=156105706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:14,0 chr1 156105707 . G . PASS END=156105707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 156105708 . C . PASS END=156105708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:6:18:0,6,446:0,6,255:15,0 chr1 156105709 . G . PASS END=156105711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 156105712 . G . PASS END=156105712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,533:0,21,255:14,0 chr1 156105713 . C . PASS END=156105713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 156105714 . T . PASS END=156105714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 156105715 . T . PASS END=156105715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:16,0 chr1 156105716 . C . PASS END=156105716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,476:0,21,255:16,0 chr1 156105717 . G . PASS END=156105717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 156105718 . A . PASS END=156105719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 156105720 . A . LowGQ END=156105720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,509:18,0,255:17,0 chr1 156105721 . C . PASS END=156105721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156105722 . C . PASS END=156105722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156105723 . T . PASS END=156105723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,554:0,15,255:18,0 chr1 156105724 . G . PASS END=156105725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156105726 . A . PASS END=156105726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:18,0 chr1 156105727 . G . PASS END=156105728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 156105729 . A . PASS END=156105730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156105731 . T . PASS END=156105731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,643:0,8,255:18,0 chr1 156105732 . C . PASS END=156105732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156105733 . A . PASS END=156105733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:18,0 chr1 156105734 . C . PASS END=156105735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,647:0,46,255:20,0 chr1 156105736 . G . PASS END=156105743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,699:0,63,255:22,0 chr1 156105744 . A . PASS END=156105744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 156105745 . G . PASS END=156105745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 156105746 . C . PASS END=156105746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,739:0,38,255:20,0 chr1 156105747 . G . PASS END=156105749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 156105750 . A . PASS END=156105750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,766:0,39,255:19,0 chr1 156105751 . C . PASS END=156105752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 156105753 . C . PASS END=156105754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 156105755 . A . PASS END=156105758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 156105759 . G . PASS END=156105759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:21,0 chr1 156105760 . G . PASS END=156105760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156105761 . C . PASS END=156105761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 156105762 . G . PASS END=156105763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156105764 . C . PASS END=156105764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 156105765 . T . PASS END=156105777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,807:0,66,255:23,0 chr1 156105778 . G . PASS END=156105778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:22,0 chr1 156105779 . G . PASS END=156105779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,890:0,72,255:24,0 chr1 156105780 . A . PASS END=156105780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 156105781 . G . PASS END=156105787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,961:0,65,255:25,0 chr1 156105788 . A . PASS END=156105788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,962:0,53,255:24,0 chr1 156105789 . T . PASS END=156105790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:25,0 chr1 156105791 . G . PASS END=156105793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 156105794 . G . PASS END=156105794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 156105795 . A . PASS END=156105804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 156105805 . A . PASS END=156105806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156105807 . G . PASS END=156105808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156105809 . A . PASS END=156105809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:27,0 chr1 156105810 . T . PASS END=156105810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 156105811 . G . PASS END=156105814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156105815 . C . PASS END=156105858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:26,0 chr1 156105859 . C . PASS END=156105862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 156105863 . G . PASS END=156105863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156105864 . A . PASS END=156105886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,49,255:19,0 chr1 156105887 . A . PASS END=156105887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 156105888 . A . PASS END=156105890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 156105891 . T . PASS END=156105910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:17,0 chr1 156105911 . A . PASS END=156105911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 156105912 . G . PASS END=156105913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156105918 . C . PASS END=156105918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156106002 . C . PASS END=156106002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156106004 . G . PASS END=156106012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 156106013 . T . PASS END=156106013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 156106014 . G . PASS END=156106039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,847:0,69,255:24,0 chr1 156106040 . G . PASS END=156106040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 156106041 . C . PASS END=156106062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 156106063 . T . PASS END=156106063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 156106064 . C . PASS END=156106074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:22,0 chr1 156106075 . C . PASS END=156106094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,49,255:19,0 chr1 156106095 . C . PASS END=156106095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:17,1 chr1 156106096 . A . PASS END=156106096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:15:22:0,15,672:0,15,255:16,1 chr1 156106097 . A . PASS END=156106100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 156106101 . G . PASS END=156106106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,837:0,66,255:24,0 chr1 156106107 . A . PASS END=156106107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,587:0,38,255:22,0 chr1 156106108 . C . PASS END=156106114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr1 156106115 . C . PASS END=156106122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:28,0 chr1 156106123 . A . PASS END=156106123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,907:0,67,255:27,0 chr1 156106124 . G . PASS END=156106147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1019:0,84,255:32,0 chr1 156106148 . C . PASS END=156106184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:36:0,91,1250:0,91,255:40,0 chr1 156106185 . T C, 173.41 PASS DP=42;MQ=249.74;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,22,0:0,20,0:123:211,126,0,1620,126,1620:255,126,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,17:0,0,19,23 chr1 156106186 . G . PASS END=156106222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,110,1535:0,110,255:40,0 chr1 156106223 . A . PASS END=156106248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:42:0,91,1484:0,91,255:40,0 chr1 156106249 . A . PASS END=156106249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1480:0,74,255:34,0 chr1 156106250 . A . PASS END=156106259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:41:0,84,1332:0,84,255:39,0 chr1 156106260 . G . PASS END=156106260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1419:0,49,255:38,0 chr1 156106261 . C . PASS END=156106331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:38:0,84,1430:0,84,255:40,0 chr1 156106332 . T . PASS END=156106340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:34,0 chr1 156106706 . C . PASS END=156106707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 156106710 . A . PASS END=156106710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156106712 . G . PASS END=156106719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:33,0 chr1 156106720 . C . PASS END=156106720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:34,0 chr1 156106721 . A . PASS END=156106778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:30:0,84,1188:0,86,255:34,0 chr1 156106779 . T . PASS END=156106779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 156106780 . C . PASS END=156106780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156106781 . C . PASS END=156106793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,978:0,70,255:25,0 chr1 156106794 . C . PASS END=156106794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156106795 . C . PASS END=156106795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 156106796 . C . PASS END=156106820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1156:0,83,255:36,0 chr1 156106824 . G . PASS END=156106825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:36,0 chr1 156106827 . G . PASS END=156106827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 156106833 . C . PASS END=156106833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 156106902 . A . PASS END=156106902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:29,0 chr1 156106904 . A . PASS END=156106925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1241:0,96,255:33,0 chr1 156106926 . C . PASS END=156106926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:30,0 chr1 156106927 . C . PASS END=156106989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:34,0 chr1 156106990 . C . PASS END=156106990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156106991 . C . PASS END=156107013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 156107014 . C . PASS END=156107024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:28:0,69,1035:0,74,255:26,0 chr1 156107028 . G . PASS END=156107028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 156107033 . C . PASS END=156107033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 156107433 . T . PASS END=156107433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156107437 . C . PASS END=156107437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 156107442 . C . PASS END=156107442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 156107444 . G . PASS END=156107546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1141:0,80,255:40,0 chr1 156107547 . C . PASS END=156107547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156107548 . G . PASS END=156107553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 156107554 . G . PASS END=156107555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 156107562 . G . PASS END=156107562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156107591 . G . PASS END=156107591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156107617 . G . PASS END=156107617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 156107658 . C . PASS END=156107658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156108268 . T . PASS END=156108268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 156108271 . C . PASS END=156108273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 156108279 . G . PASS END=156108299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 156108300 . G . PASS END=156108306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:12,0 chr1 156108307 . C . PASS END=156108307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 156108308 . C . PASS END=156108311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 156108312 . G . PASS END=156108380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:17,0 chr1 156108381 . A . PASS END=156108381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 156108382 . G . PASS END=156108397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:19,0 chr1 156108398 . G . PASS END=156108406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 156108407 . A . PASS END=156108448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,615:0,54,255:19,0 chr1 156108449 . T . PASS END=156108456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:17:0,36,540:0,51,255:13,0 chr1 156108457 . A . PASS END=156108457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156108458 . C . PASS END=156108464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:13,0 chr1 156108465 . G . PASS END=156108497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 156108498 . A . PASS END=156108498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 156108499 . A . PASS END=156108560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 156108561 . T . PASS END=156108561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 156108562 . G . PASS END=156108573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 156108574 . A . PASS END=156108574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:15,0 chr1 156108575 . A . PASS END=156108575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 156108576 . T . PASS END=156108576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 156108577 . C . PASS END=156108615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,590:0,41,255:19,0 chr1 156108616 . G . PASS END=156108616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 156108617 . T . PASS END=156108618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156108619 . G . PASS END=156108642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 156108643 . T . PASS END=156108649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,654:0,46,255:19,0 chr1 156108650 . C . PASS END=156108653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156108654 . A . PASS END=156108654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 156108655 . G . PASS END=156108688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr1 156108689 . G . PASS END=156108717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 156108718 . G . PASS END=156108754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,459:0,39,255:13,0 chr1 156108755 . C . PASS END=156108756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 156108757 . G . PASS END=156108770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr1 156108860 . T . PASS END=156108860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr1 156108869 . A . PASS END=156108897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1181:0,88,255:35,0 chr1 156108902 . G . PASS END=156108903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156109561 . A . PASS END=156109630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:45:0,88,1496:0,88,255:40,0 chr1 156119535 . A . PASS END=156119559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1216:0,83,255:35,0 chr1 156123310 . C . PASS END=156123310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 156123420 . G . PASS END=156123420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156123521 . A . PASS END=156123521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 156124370 . A . PASS END=156124386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 156124387 . G . PASS END=156124405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 156124406 . C . PASS END=156124406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 156124407 . T . PASS END=156124417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr1 156124418 . T . PASS END=156124428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 156124429 . A . PASS END=156124434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156124435 . T . PASS END=156124441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156124442 . C . PASS END=156124446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 156124447 . G . PASS END=156124470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 156124471 . C T, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:0,0,0:7,1,0:20:15,0,50,36,249,285:15,0,239:6,0:4.2106e-02,2.0157e+01,7.3157e+01,5.5880e+01,3.0410e+02,3.0805e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,6,0,1:6,1,1,0 chr1 156124472 . G . PASS END=156124488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 156124489 . C . PASS END=156124495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:6,0 chr1 156124496 . A . PASS END=156124507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:6:3:0,6,90:0,9,116:3,0 chr1 156124508 . G . PASS END=156124508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 156126205 . G . PASS END=156126206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:25,0 chr1 156126207 . G . PASS END=156126208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 156126209 . T . PASS END=156126209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 156126210 . G . PASS END=156126328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,1008:0,80,255:38,0 chr1 156126329 . T . PASS END=156126329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:27,0 chr1 156126330 . A . PASS END=156126333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 156126334 . A . PASS END=156126349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:25:0,63,945:0,75,255:25,0 chr1 156126350 . C . PASS END=156126353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 156126354 . C . PASS END=156126365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:21,0 chr1 156127861 . A . PASS END=156127923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,139,255:40,1 chr1 156128178 . G . PASS END=156128264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1019:0,87,255:40,0 chr1 156128265 . T . PASS END=156128265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:34,0 chr1 156128266 . T . PASS END=156128271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 156128272 . T . PASS END=156128272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1079:0,75,255:34,0 chr1 156128273 . T . PASS END=156128277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1299:0,108,255:36,0 chr1 156128510 . G . PASS END=156128510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 156128511 . A . PASS END=156128511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 156128512 . A . PASS END=156128520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 156128521 . T . PASS END=156128521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 156128522 . T . PASS END=156128525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 156128526 . A . PASS END=156128526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 156128527 . C . PASS END=156128531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 156128532 . T . PASS END=156128532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 156128533 . G . PASS END=156128539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:26,0 chr1 156128540 . T . PASS END=156128548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156128549 . A . PASS END=156128549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156128550 . A . PASS END=156128553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156128554 . C . PASS END=156128554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 156128555 . A . PASS END=156128559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156128560 . G . PASS END=156128560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 156128561 . G . PASS END=156128561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:25,0 chr1 156128562 . G . PASS END=156128571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr1 156128572 . A . PASS END=156128572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 156128573 . A . PASS END=156128577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1027:0,87,255:29,0 chr1 156128578 . C . PASS END=156128588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 156128589 . C . PASS END=156128597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 156128598 . A . PASS END=156128610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:24,0 chr1 156128611 . G . PASS END=156128612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 156128613 . T . PASS END=156128615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 156130234 . A . PASS END=156130236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr1 156130237 . G . PASS END=156130237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 156130238 . G . PASS END=156130238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 156130239 . A . PASS END=156130239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 156130240 . T . PASS END=156130240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156130241 . G . PASS END=156130241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156130242 . C . PASS END=156130243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:28,0 chr1 156130244 . C . PASS END=156130344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:31:0,82,1133:0,82,255:40,0 chr1 156130345 . T . PASS END=156130345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1305:0,65,255:32,0 chr1 156130346 . G . PASS END=156130350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,104,255:34,0 chr1 156130696 . A . PASS END=156130697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1064:0,65,255:31,0 chr1 156130698 . G . PASS END=156130698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:31,0 chr1 156130699 . A . PASS END=156130699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:31,0 chr1 156130700 . C . PASS END=156130701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:33,0 chr1 156130702 . C . PASS END=156130706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:34:0,69,1204:0,69,255:35,0 chr1 156130707 . T . PASS END=156130707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1078:0,91,255:35,0 chr1 156130708 . T . PASS END=156130709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1268:0,72,255:36,0 chr1 156130710 . G . PASS END=156130713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1333:0,81,255:37,0 chr1 156130714 . C . PASS END=156130715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:36,0 chr1 156130716 . G . PASS END=156130721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1286:0,81,255:37,0 chr1 156130722 . C . PASS END=156130722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1290:0,70,255:37,0 chr1 156130723 . C . PASS END=156130723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1349:0,84,255:37,0 chr1 156130724 . T . PASS END=156130724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1325:0,62,255:37,0 chr1 156130725 . T . PASS END=156130725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1186:0,51,255:35,0 chr1 156130726 . C . PASS END=156130726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:9:39:0,9,1249:0,9,255:36,0 chr1 156130727 . G . PASS END=156130728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:39:0,90,1426:0,90,255:39,0 chr1 156130729 . C . PASS END=156130729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1385:0,74,255:38,0 chr1 156130730 . C . PASS END=156130730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1382:0,90,255:39,0 chr1 156130731 . C . PASS END=156130731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1357:0,51,255:38,0 chr1 156130732 . A . PASS END=156130732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1347:0,73,255:38,0 chr1 156130733 . G . PASS END=156130740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1399:0,87,255:40,0 chr1 156130741 . A . PASS END=156130741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1418:0,76,255:38,0 chr1 156130742 . C . PASS END=156130744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:42:0,93,1328:0,93,255:40,0 chr1 156130745 . C . PASS END=156130745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:49:43:0,49,1333:0,49,255:37,0 chr1 156130746 . T . PASS END=156130746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1470:0,112,255:40,0 chr1 156130747 . T . PASS END=156130747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1328:0,79,255:38,0 chr1 156130748 . C . PASS END=156130748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1480:0,96,255:39,0 chr1 156130749 . T . PASS END=156130749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1380:0,79,255:38,0 chr1 156130750 . T . PASS END=156130778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:41:0,88,1406:0,88,255:40,0 chr1 156130779 . T . PASS END=156130779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:46:43:0,46,1164:0,46,255:34,0 chr1 156130780 . T . PASS END=156130786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:42:0,96,1394:0,96,255:39,0 chr1 156130787 . G . PASS END=156130787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1345:0,76,255:36,0 chr1 156130788 . C . PASS END=156130794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1342:0,90,255:39,0 chr1 156130795 . C . PASS END=156130795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1474:0,107,255:35,0 chr1 156130796 . A . PASS END=156130796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1282:0,73,255:33,0 chr1 156130797 . T . PASS END=156130797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1325:0,51,255:33,0 chr1 156130798 . C . PASS END=156130807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,98,255:36,0 chr1 156130808 . T . PASS END=156130808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1247:0,64,255:24,0 chr1 156130809 . A . PASS END=156130810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,97,255:27,0 chr1 156130811 . A . PASS END=156130812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1125:0,81,255:24,0 chr1 156130813 . T . PASS END=156130813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:13:34:0,13,963:0,13,255:21,0 chr1 156130814 . C . PASS END=156130814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 156130815 . T . PASS END=156130815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,765:0,4,255:19,0 chr1 156130816 . G . PASS END=156130818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,869:0,70,255:24,0 chr1 156130819 . A . PASS END=156130820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,820:0,53,255:23,0 chr1 156130827 . G . PASS END=156130827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,870:0,51,255:24,0 chr1 156131137 . A . LowGQ END=156131137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,280:19,0,255:10,0 chr1 156131138 . A . PASS END=156131138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 156131139 . T . LowGQ END=156131140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:0,0,255:11,0 chr1 156131141 . A . PASS END=156131152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 156131153 . A . PASS END=156131153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 156131154 . A . PASS END=156131155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 156131156 . A . PASS END=156131156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:11,0 chr1 156131157 . G . PASS END=156131158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 156131159 . T . PASS END=156131159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:11,0 chr1 156131160 . G . PASS END=156131162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 156131163 . G . PASS END=156131163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 156131164 . C . PASS END=156131164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:11,0 chr1 156131165 . A . PASS END=156131165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 156131166 . G . PASS END=156131178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 156131179 . A . PASS END=156131220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:19,0 chr1 156131221 . C . PASS END=156131232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 156131233 . G . PASS END=156131233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156131234 . T . PASS END=156131247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:22,0 chr1 156131248 . G . PASS END=156131251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 156131252 . T . PASS END=156131252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 156131253 . G . PASS END=156131254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156131255 . T . PASS END=156131255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 156131256 . C . PASS END=156131259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 156131260 . G . PASS END=156131260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156131261 . C . PASS END=156131261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156131262 . C . PASS END=156131268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156131269 . C . PASS END=156131274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 156131275 . G . PASS END=156131299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,71,255:26,0 chr1 156131300 . C . PASS END=156131309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,53,255:19,0 chr1 156132735 . G . PASS END=156132735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 156132736 . C . PASS END=156132738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:24,0 chr1 156132739 . G . PASS END=156132740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,752:0,55,255:23,0 chr1 156132741 . T . PASS END=156132742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 156132743 . G . PASS END=156132743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 156132744 . C . PASS END=156132746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:26,0 chr1 156132747 . G . PASS END=156132749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 156132750 . C . PASS END=156132750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 156132751 . A . PASS END=156132753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 156132754 . A . PASS END=156132754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 156132755 . G . PASS END=156132763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:33,0 chr1 156132764 . T . PASS END=156132764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:30,0 chr1 156132765 . T . PASS END=156132774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1231:0,86,255:32,0 chr1 156132775 . T . PASS END=156132775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1028:0,68,255:28,0 chr1 156132776 . C . PASS END=156132859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,947:0,82,255:39,0 chr1 156132860 . C . PASS END=156132863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 156132864 . G . PASS END=156132864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156132865 . A . PASS END=156132865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:26,0 chr1 156132866 . C . PASS END=156132867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 156132868 . A . PASS END=156132885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,919:0,70,255:25,0 chr1 156142617 . T . PASS END=156142622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr1 156142623 . G . PASS END=156142643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,899:0,64,255:26,0 chr1 156142644 . G . PASS END=156142669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 156142670 . C . PASS END=156142677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr1 156142678 . A . PASS END=156142687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1141:0,87,255:30,0 chr1 156142688 . G . PASS END=156142688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 156142689 . G . PASS END=156142696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1141:0,93,255:31,0 chr1 156142697 . G . PASS END=156142697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 156142698 . C . PASS END=156142719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1119:0,93,255:31,0 chr1 156142720 . T . PASS END=156142747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,847:0,69,255:26,0 chr1 156142748 . A . PASS END=156142756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156142757 . C . PASS END=156142761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156142762 . A . PASS END=156142784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 156142785 . T . PASS END=156142797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:12,0 chr1 156144613 . C . PASS END=156144717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1133:0,90,255:40,0 chr1 156144718 . T . PASS END=156144718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:25,0 chr1 156144719 . G . PASS END=156144726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 156144727 . C . PASS END=156144731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:25,0 chr1 156144877 . G . PASS END=156144885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:31,0 chr1 156144886 . T . PASS END=156144886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1011:0,63,255:30,0 chr1 156144887 . T . PASS END=156144957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1164:0,88,255:35,0 chr1 156144958 . T . PASS END=156145014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 156145015 . C . PASS END=156145015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 156145016 . T . PASS END=156145017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156145018 . C . PASS END=156145018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 156145019 . T . PASS END=156145034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 156145347 . G . PASS END=156145368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:26,0 chr1 156145369 . G . PASS END=156145369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156145370 . A . PASS END=156145373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156145374 . G . PASS END=156145384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 156145385 . A . PASS END=156145385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr1 156145386 . G . PASS END=156145388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156145389 . G . PASS END=156145389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156145390 . G . PASS END=156145410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr1 156145411 . A . PASS END=156145414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1139:0,77,255:27,0 chr1 156145415 . G . PASS END=156145415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156145416 . G . PASS END=156145445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,947:0,72,255:26,0 chr1 156145446 . C . PASS END=156145446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:22,0 chr1 156145447 . A . PASS END=156145447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156146183 . C . PASS END=156146183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156146196 . T . PASS END=156146204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1131:0,87,255:30,0 chr1 156146205 . T . PASS END=156146205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 156146206 . C . PASS END=156146208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 156146209 . G . PASS END=156146209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 156146210 . G . PASS END=156146217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 156146218 . C T, 49.45 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=4.108;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,14,0:0.452,0.000:31:8,6,0:9,8,0:48:84,0,50,501,578,1079:255,0,255:15,0:4.9445e+01,7.1187e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,8,6:6,11,6,8 chr1 156146219 . A . PASS END=156146255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:32:0,90,1290:0,96,255:40,0 chr1 156146256 . C . PASS END=156146456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,109,1691:0,109,255:40,0 chr1 156146457 . A . PASS END=156146457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1729:0,78,255:40,0 chr1 156146458 . A . PASS END=156146602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1197:0,87,255:40,0 chr1 156146603 . A . PASS END=156146639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1125:0,90,255:33,0 chr1 156146640 . G A, 45.31 PASS DP=31;MQ=246.44;MQRankSum=4.476;ReadPosRankSum=0.947;FractionInformativeReads=0.968;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,11,0:0.367,0.000:30:11,4,0:8,7,0:45:80,0,50,385,679,1065:255,0,255:19,0:4.5310e+01,1.4962e-04,5.3000e+01,3.8510e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,11,6,5:8,11,5,6 chr1 156146641 . G . PASS END=156146642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 156146643 . G . PASS END=156146653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:64:30:0,64,1035:0,64,255:28,0 chr1 156146654 . G . PASS END=156146654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 156146655 . G . PASS END=156146655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 156146656 . C . PASS END=156146662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,86,255:29,0 chr1 156146663 . A . PASS END=156146663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:27,0 chr1 156146664 . C . PASS END=156146677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1103:0,90,255:31,0 chr1 156146678 . G . PASS END=156146788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:32:0,82,969:0,82,255:40,0 chr1 156146890 . C . PASS END=156146890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156146967 . C . PASS END=156146967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:24,0 chr1 156146969 . C . PASS END=156146969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 156146975 . G . PASS END=156146976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 156146996 . A . PASS END=156146996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156147122 . C . PASS END=156147122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 156147154 . G . PASS END=156147154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 156147159 . T . PASS END=156147159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 156147273 . G . PASS END=156147273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 156147310 . A . PASS END=156147310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 156147358 . A . PASS END=156147358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156147454 . C . PASS END=156147455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr1 156147475 . T . PASS END=156147475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:33,0 chr1 156147499 . A . PASS END=156147499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:31,0 chr1 156169639 . A . PASS END=156169647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,122,255:40,0 chr1 156169648 . A . PASS END=156169878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:41:0,86,1385:0,86,255:40,0 chr1 156169879 . A . PASS END=156169879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1372:0,69,255:36,0 chr1 156169880 . C . PASS END=156169990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:35:0,92,1316:0,92,255:40,0 chr1 156169991 . C . PASS END=156169991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr1 156169992 . A . PASS END=156170050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1109:0,82,255:36,0 chr1 156170051 . T . PASS END=156170053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 156170054 . T . PASS END=156170056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 156170057 . A . PASS END=156170057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:26,0 chr1 156170058 . A . PASS END=156170124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1233:0,86,255:38,0 chr1 156170125 . T . PASS END=156170125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:37,0 chr1 156170126 . T . PASS END=156170196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:38:0,97,1303:0,97,255:40,0 chr1 156170197 . G . PASS END=156170197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:36,0 chr1 156170198 . T . PASS END=156170225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,89,255:37,0 chr1 156170226 . C . PASS END=156170241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:24,0 chr1 156170242 . C . PASS END=156170242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 156170243 . C . PASS END=156170246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156170247 . C . PASS END=156170247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:19,0 chr1 156170248 . T . PASS END=156170253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156170254 . T . PASS END=156170255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 156170256 . C . PASS END=156170261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156170262 . A . PASS END=156170263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 156177653 . C . PASS END=156177658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 156177659 . T . PASS END=156177659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 156177660 . C . PASS END=156177664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 156177665 . C . PASS END=156177665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 156177666 . C . PASS END=156177669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156177670 . A . PASS END=156177670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 156177671 . T . PASS END=156177674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156177675 . A . PASS END=156177675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:18,0 chr1 156177676 . G . PASS END=156177687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,784:0,62,255:26,0 chr1 156177688 . T . PASS END=156177691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 156177692 . T . PASS END=156177692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 156177693 . G . PASS END=156177783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:29:0,83,1078:0,83,255:37,0 chr1 156177784 . G . PASS END=156177785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1147:0,77,255:27,0 chr1 156177786 . C . PASS END=156177786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156177787 . A . PASS END=156177804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,947:0,75,255:26,0 chr1 156180031 . G . PASS END=156180038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156180039 . C . PASS END=156180040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156180041 . A . PASS END=156180041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 156180042 . G . PASS END=156180064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,515:0,45,255:19,0 chr1 156180065 . G . PASS END=156180080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:22,0 chr1 156180081 . A . PASS END=156180081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 156180082 . G . PASS END=156180089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:25,0 chr1 156180090 . T . PASS END=156180090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 156180091 . T . PASS END=156180119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,797:0,72,255:25,0 chr1 156180120 . A . PASS END=156180129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,806:0,80,255:28,0 chr1 156180130 . G . PASS END=156180135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156180136 . C . PASS END=156180137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 156180138 . T . PASS END=156180153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr1 156180154 . G . PASS END=156180156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156180157 . G . PASS END=156180183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,65,255:26,0 chr1 156180184 . A . PASS END=156180222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:19,0 chr1 156182807 . A . PASS END=156182817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 156182818 . A . PASS END=156182818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:23,0 chr1 156182819 . A . PASS END=156182848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,870:0,65,255:25,0 chr1 156182849 . G . PASS END=156182849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,2 chr1 156182850 . A . PASS END=156182850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,900:0,12,255:23,2 chr1 156182851 . A . PASS END=156182851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 156182852 . A . PASS END=156182862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,933:0,78,255:26,0 chr1 156182863 . G . PASS END=156182867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,881:0,81,255:27,0 chr1 156182868 . C . PASS END=156182913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,823:0,65,255:26,0 chr1 156182914 . G . PASS END=156182926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,50,255:18,0 chr1 156182927 . A . PASS END=156182927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 156182928 . T . PASS END=156182933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 156182934 . A . PASS END=156182950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:12,0 chr1 156182951 . C . PASS END=156182951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 156182952 . T . PASS END=156182962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 156182963 . G . PASS END=156182963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 156182964 . G . PASS END=156182967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 156195348 . C . PASS END=156195370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1117:0,80,255:34,0 chr1 156195371 . G . PASS END=156195459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:36:0,85,1343:0,85,255:40,0 chr1 156202111 . C . PASS END=156202135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1241:0,89,255:40,0 chr1 156202136 . A . PASS END=156202172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,107,1504:0,107,255:40,0 chr1 156202173 . A G, 50.00 PASS DP=43;MQ=249.25;MQRankSum=5.600;ReadPosRankSum=3.146;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,22,0:0.512,0.000:43:12,6,0:9,16,0:48:85,0,50,787,751,1538:255,0,255:21,0:5.0000e+01,6.5492e-05,5.2953e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,9,13:8,13,13,9 chr1 156202174 . A . PASS END=156202210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:36:0,81,1215:0,85,255:40,0 chr1 156202211 . A . PASS END=156202216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:33:0,72,1080:0,83,255:25,0 chr1 156203419 . G . PASS END=156203425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1060:0,93,255:31,0 chr1 156203426 . T . PASS END=156203426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 156203427 . C . PASS END=156203429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 156203430 . T . PASS END=156203430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 156203431 . G . PASS END=156203442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,925:0,84,255:34,0 chr1 156203443 . G . PASS END=156203443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:31,0 chr1 156203444 . A . PASS END=156203519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:34:0,86,1218:0,86,255:40,0 chr1 156206079 . G . PASS END=156206097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 156206098 . G . PASS END=156206113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,735:0,60,255:23,0 chr1 156206114 . G . PASS END=156206116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156206117 . T . PASS END=156206117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 156206118 . T . PASS END=156206214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1157:0,82,255:37,0 chr1 156206215 . G . PASS END=156206215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:27,0 chr1 156206216 . G . PASS END=156206217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 156206218 . C . PASS END=156206218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:26,0 chr1 156206219 . G . PASS END=156206239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1178:0,83,255:30,0 chr1 156206240 . A . PASS END=156206240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:27,0 chr1 156206241 . G . PASS END=156206242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 156206243 . T . PASS END=156206260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,71,255:27,0 chr1 156206261 . A . PASS END=156206262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 156206263 . C . PASS END=156206267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 156206268 . C . PASS END=156206268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 156206269 . T . PASS END=156206271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 156206272 . C . PASS END=156206274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,56,255:18,0 chr1 156209339 . G . PASS END=156209392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1133:0,82,255:35,0 chr1 156212023 . A . PASS END=156212027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156212028 . A . PASS END=156212029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 156212030 . C . PASS END=156212030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156212031 . C . PASS END=156212031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 156212032 . C . PASS END=156212035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156212036 . C . PASS END=156212037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 156212038 . C . PASS END=156212040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156212041 . C . PASS END=156212041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 156212042 . T . PASS END=156212050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 156212051 . T . PASS END=156212051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 156212052 . G . PASS END=156212053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 156212054 . C . PASS END=156212059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 156212060 . C . PASS END=156212061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156212062 . G . PASS END=156212065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr1 156212066 . T . PASS END=156212066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,728:0,47,255:23,0 chr1 156212067 . T . PASS END=156212080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr1 156212081 . A . PASS END=156212081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:23,0 chr1 156212082 . G . PASS END=156212082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 156212083 . G . PASS END=156212083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:20,0 chr1 156212084 . C . PASS END=156212086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 156212344 . G . PASS END=156212348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 156212349 . A . PASS END=156212349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 156212350 . A . PASS END=156212359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,609:0,44,255:19,0 chr1 156212360 . T . PASS END=156212366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 156212367 . T . PASS END=156212367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 156212368 . C . PASS END=156212374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 156212375 . A . PASS END=156212375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr1 156212376 . G . PASS END=156212376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 156212377 . G . PASS END=156212378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156212379 . G . PASS END=156212379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:19,0 chr1 156212380 . C . PASS END=156212382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156212553 . C . PASS END=156212557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 156212558 . G . PASS END=156212558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156212559 . T . PASS END=156212559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 156212560 . G . PASS END=156212563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:20,0 chr1 156212564 . A . PASS END=156212568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 156212569 . G . PASS END=156212571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156212572 . G . PASS END=156212572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 156212573 . G . PASS END=156212576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156212577 . G . PASS END=156212578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,798:0,50,255:20,0 chr1 156212579 . G . PASS END=156212580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156212581 . G . PASS END=156212581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 156212582 . G . PASS END=156212602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,771:0,69,255:23,0 chr1 156212603 . T . PASS END=156212603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 156212604 . A . PASS END=156212605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 156212606 . C . PASS END=156212606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 156212607 . T . PASS END=156212610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr1 156212611 . T . PASS END=156212611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 156212612 . C . PASS END=156212614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 156212615 . T . PASS END=156212615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,754:0,38,255:22,0 chr1 156212616 . G . PASS END=156212616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 156212617 . G . PASS END=156212618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 156212619 . T . PASS END=156212619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr1 156212620 . G . PASS END=156212620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 156212621 . G . PASS END=156212621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,844:0,69,255:23,0 chr1 156212622 . G . PASS END=156212622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 156212824 . A . PASS END=156212824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 156212825 . G . PASS END=156212825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156212826 . C . PASS END=156212829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156212830 . A . PASS END=156212830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 156212831 . G . PASS END=156212844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:18,0 chr1 156212845 . T . PASS END=156212845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 156212846 . C . PASS END=156212856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 156212857 . C . PASS END=156212878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,721:0,60,255:23,0 chr1 156212879 . A . PASS END=156212879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156212880 . A . PASS END=156212896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 156212897 . T . PASS END=156212929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,674:0,46,255:19,0 chr1 156212930 . C . PASS END=156212944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 156212945 . C . PASS END=156212953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,743:0,47,255:18,0 chr1 156213257 . G A, 173.41 PASS DP=42;MQ=249.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,22,0:0,20,0:123:211,126,0,1620,126,1620:255,126,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,23:0,0,25,17 chr1 156213652 . T . PASS END=156213660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 156213661 . A . PASS END=156213661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 156213662 . C . PASS END=156213662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 156213663 . A . PASS END=156213663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 156213664 . C . PASS END=156213666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 156213667 . A . PASS END=156213669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 156213670 . C . PASS END=156213670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:13,0 chr1 156213671 . A . PASS END=156213697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,491:0,40,255:17,0 chr1 156213698 . C . PASS END=156213717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 156213718 . C . PASS END=156213718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156213719 . C . PASS END=156213741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:24,0 chr1 156213742 . T . PASS END=156213742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 156213743 . G . PASS END=156213753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 156213754 . T . PASS END=156213754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 156213755 . A . PASS END=156213760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 156213761 . C . PASS END=156213761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156213762 . C . PASS END=156213769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156213770 . T . PASS END=156213770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 156213771 . C . PASS END=156213773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 156213774 . T . PASS END=156213784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 156213785 . C . PASS END=156213792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,656:0,60,255:20,0 chr1 156213793 . T . PASS END=156213807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,714:0,46,255:19,0 chr1 156213808 . T . PASS END=156213808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:15,0 chr1 156213809 . G . PASS END=156213815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:17,0 chr1 156213816 . C . PASS END=156213816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:14,0 chr1 156213817 . C . PASS END=156213817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156213818 . A . PASS END=156213818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:14,0 chr1 156213819 . G . PASS END=156213825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 156213826 . A . PASS END=156213826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,515:0,12,255:14,0 chr1 156213827 . T . PASS END=156213828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156213829 . C . LowGQ END=156213829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,449:13,0,255:13,0 chr1 156213830 . G . PASS END=156213835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 156213836 . A . PASS END=156213847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156213848 . C . PASS END=156213851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 156213852 . A . PASS END=156213867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 156213868 . A . PASS END=156213882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 156213883 . C . PASS END=156213889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 156213890 . C . PASS END=156213892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156213893 . C . PASS END=156213899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156213900 . A . PASS END=156213908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 156213909 . G . PASS END=156213919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:9:0,15,225:0,27,255:6,0 chr1 156213920 . T . LowGQ END=156213920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:8,0 chr1 156213921 . C . PASS END=156213922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156213923 . C . PASS END=156213943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 156213944 . C . PASS END=156213944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 156213945 . C . PASS END=156213945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 156213946 . C . PASS END=156213946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 156213947 . C . PASS END=156213953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 156213954 . G . PASS END=156213970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,446:0,42,255:17,0 chr1 156213971 . A . PASS END=156213971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 156213972 . G . PASS END=156213977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:17,0 chr1 156213978 . G . PASS END=156213980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 156213981 . C . PASS END=156213981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 156213982 . T . PASS END=156213991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:23,0 chr1 156213992 . A . PASS END=156213992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:24,0 chr1 156213993 . A . PASS END=156213998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 156213999 . G . PASS END=156213999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 156214000 . T . PASS END=156214007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 156214008 . A . PASS END=156214008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 156214009 . A . PASS END=156214019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,917:0,62,255:26,0 chr1 156214020 . A . PASS END=156214021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156214022 . G . PASS END=156214027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 156214028 . G . PASS END=156214031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156214032 . C . PASS END=156214032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 156214033 . C . PASS END=156214052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 156214053 . G . PASS END=156214053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 156214054 . T . PASS END=156214058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156214059 . A . PASS END=156214060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,992:0,68,255:26,0 chr1 156214061 . T . PASS END=156214065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 156214066 . C . PASS END=156214066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 156214067 . T . PASS END=156214193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:37,0 chr1 156214194 . C . PASS END=156214194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 156214373 . C . PASS END=156214463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,111,1440:0,112,255:40,0 chr1 156214481 . C . PASS END=156214517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,105,1459:0,107,255:40,0 chr1 156214518 . G . PASS END=156214518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr1 156214519 . C . PASS END=156214671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,81,255:40,0 chr1 156214672 . A . PASS END=156214685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,62,255:26,0 chr1 156214686 . C . PASS END=156214702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:20:0,54,810:0,60,255:19,0 chr1 156214933 . C . PASS END=156214990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:35:0,83,1260:0,83,255:38,0 chr1 156214991 . A . PASS END=156215009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:26,0 chr1 156215010 . G . PASS END=156215010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,800:0,28,255:20,0 chr1 156215011 . G . PASS END=156215012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 156215013 . T . PASS END=156215013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 156215014 . T . PASS END=156215014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156215015 . T . PASS END=156215015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 156215016 . C . PASS END=156215020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156215021 . T . PASS END=156215021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 156215022 . C . PASS END=156215027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 156215028 . A . PASS END=156215028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 156215029 . A . PASS END=156215030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156215031 . T . PASS END=156215031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:18,0 chr1 156215032 . G . PASS END=156215038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 156215039 . G . PASS END=156215039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 156215040 . G . PASS END=156215045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 156215046 . A . PASS END=156215046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 156215047 . A . PASS END=156215050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 156215051 . C . PASS END=156215056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr1 156215326 . C . PASS END=156215331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 156215332 . T . PASS END=156215332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 156215333 . A . PASS END=156215336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156215337 . G . PASS END=156215362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 156215363 . T . PASS END=156215365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156215366 . G . PASS END=156215373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 156215374 . G . PASS END=156215374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 156215375 . C . PASS END=156215381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:17,0 chr1 156215382 . A . PASS END=156215382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,543:0,20,255:16,0 chr1 156215383 . A . PASS END=156215384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 156215385 . G . PASS END=156215386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 156215387 . A . PASS END=156215387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 156215388 . C . PASS END=156215388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156215389 . T . PASS END=156215389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 156215390 . G . PASS END=156215399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156215400 . G . PASS END=156215400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 156215401 . C . PASS END=156215407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 156215408 . G . PASS END=156215408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 156215409 . C . PASS END=156215428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 156215429 . A . PASS END=156215429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 156215430 . G . PASS END=156215431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 156215432 . C . PASS END=156215436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 156215437 . T . PASS END=156215443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:11:0,24,360:0,33,255:9,0 chr1 156215444 . A . LowGQ END=156215444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:8,0 chr1 156215445 . G . PASS END=156215450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:8,0 chr1 156215451 . G . PASS END=156215451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 156215452 . C . PASS END=156215452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 156215573 . C . PASS END=156215577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 156215578 . C . PASS END=156215586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:23,0 chr1 156215587 . C . PASS END=156215587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 156215588 . T . PASS END=156215589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 156215590 . A . PASS END=156215590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 156215591 . G . PASS END=156215591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 156215592 . C . PASS END=156215592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr1 156215593 . G . PASS END=156215599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 156215600 . A . PASS END=156215600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 156215601 . G . PASS END=156215608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,955:0,65,255:26,0 chr1 156215609 . A . PASS END=156215617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:30,0 chr1 156215618 . T . PASS END=156215618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 156215619 . G . PASS END=156215626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156215627 . T . PASS END=156215627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:30,0 chr1 156215628 . G . PASS END=156215636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 156215637 . C . PASS END=156215637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:30,0 chr1 156215638 . A . PASS END=156215761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1194:0,86,255:38,0 chr1 156215762 . G . PASS END=156215762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:29,0 chr1 156215763 . C . PASS END=156215786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1210:0,86,255:32,0 chr1 156215787 . G . PASS END=156215787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 156215788 . G . PASS END=156215792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 156215793 . T . PASS END=156215793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 156215794 . G . PASS END=156215811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 156215812 . C . PASS END=156215813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 156215814 . C . PASS END=156215819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 156215820 . C . PASS END=156215820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 156215821 . T . PASS END=156216041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1164:0,83,255:40,1 chr1 156216472 . C . PASS END=156216477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 156216478 . G . PASS END=156216494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 156216495 . G . PASS END=156216501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 156216502 . G . PASS END=156216506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 156216507 . G . PASS END=156216520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 156216521 . A . PASS END=156216522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 156217748 . C . PASS END=156217777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:40:15:0,40,507:0,40,255:19,0 chr1 156217778 . G . PASS END=156217786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156217787 . G . PASS END=156217795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156217796 . C . PASS END=156217806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 156217807 . G . PASS END=156217808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 156217809 . G . PASS END=156217818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr1 156217819 . G . PASS END=156217819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 156217820 . C . PASS END=156217857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 156217858 . G . PASS END=156217859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 156217860 . G . PASS END=156217860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:15,0 chr1 156217861 . G . PASS END=156217890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,636:0,40,255:19,0 chr1 156217891 . A . PASS END=156217893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,646:0,60,255:20,0 chr1 156217894 . G . PASS END=156217894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 156217895 . G . PASS END=156217901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 156217902 . G . PASS END=156217903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,798:0,50,255:19,0 chr1 156217904 . G . PASS END=156217904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156217905 . A . PASS END=156217915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,765:0,50,255:18,0 chr1 156217916 . C . PASS END=156217918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156217919 . T . PASS END=156217919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr1 156217920 . G . PASS END=156217931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156217932 . G . PASS END=156217933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156217934 . G . PASS END=156217934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156217935 . A . PASS END=156217946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,753:0,49,255:19,0 chr1 156217947 . T . PASS END=156217948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 156217949 . G . PASS END=156217959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 156217960 . T . PASS END=156217968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 156217969 . A . PASS END=156217969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 156217970 . G . PASS END=156218006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 156218007 . C . PASS END=156218040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:18,0 chr1 156218041 . C . PASS END=156218054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 156218055 . A . PASS END=156218071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,327:0,27,255:9,0 chr1 156218072 . T . PASS END=156218072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 156220378 . T . PASS END=156220393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 156220394 . C . PASS END=156220401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 156220402 . G . PASS END=156220418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 156220419 . T . PASS END=156220421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 156220422 . T . PASS END=156220431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 156220432 . A . PASS END=156220445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:20:0,45,675:0,60,255:19,0 chr1 156220446 . C . PASS END=156220461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:13:0,36,540:0,39,255:13,0 chr1 156220649 . C . PASS END=156220766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1305:0,90,255:40,0 chr1 156220767 . T . PASS END=156220767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 156220768 . C . PASS END=156220772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156220773 . A . PASS END=156220781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 156220782 . A . PASS END=156220783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 156220784 . A . PASS END=156220787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:21,0 chr1 156221194 . C . PASS END=156221268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1302:0,84,255:39,0 chr1 156222205 . C . PASS END=156222295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,102,1529:0,102,255:40,0 chr1 156222710 . C . PASS END=156222726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1041:0,86,255:34,0 chr1 156222727 . A . PASS END=156222727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:33,0 chr1 156222728 . C . PASS END=156222869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1258:0,81,255:40,0 chr1 156223240 . C . PASS END=156223299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1227:0,86,255:39,0 chr1 156228796 . C . PASS END=156228801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,598:0,48,255:19,0 chr1 156228802 . G . PASS END=156228809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 156228810 . C . PASS END=156228817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 156228818 . T . PASS END=156228818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 156228819 . G . PASS END=156228831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 156228832 . C . PASS END=156228850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1078:0,84,255:31,0 chr1 156228851 . A . PASS END=156228851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 156228852 . T . PASS END=156228853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156228854 . C . PASS END=156228854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 156228855 . T . PASS END=156228898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1153:0,80,255:31,0 chr1 156228899 . T . PASS END=156228940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,808:0,66,255:26,0 chr1 156228941 . A . PASS END=156228941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 156228942 . T . PASS END=156228944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156228945 . G . PASS END=156228954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr1 156230242 . C . PASS END=156230251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 156230252 . G . PASS END=156230259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 156230260 . C . PASS END=156230260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 156230261 . A . PASS END=156230265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 156230266 . C . PASS END=156230266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:1:27:0,1,751:0,1,255:23,0 chr1 156230267 . C . PASS END=156230268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156230269 . A . PASS END=156230272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 156230273 . G . PASS END=156230274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,937:0,45,255:27,0 chr1 156230275 . G . PASS END=156230277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 156230278 . A . PASS END=156230280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 156230281 . G . PASS END=156230284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 156230285 . A . PASS END=156230285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 156230286 . A . PASS END=156230289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 156230290 . T . PASS END=156230290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1083:0,49,255:29,0 chr1 156230291 . C . PASS END=156230291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 156230292 . T . PASS END=156230292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:31,0 chr1 156230293 . G . PASS END=156230385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1202:0,86,255:35,0 chr1 156230386 . A . PASS END=156230386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 156230387 . A . PASS END=156230388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156230389 . A . PASS END=156230389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr1 156230390 . T . PASS END=156230397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1058:0,82,255:30,0 chr1 156230398 . C . PASS END=156230398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 156230399 . T . PASS END=156230399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156230400 . C . PASS END=156230403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 156230404 . A . PASS END=156230404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:24,0 chr1 156230405 . C . PASS END=156230411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:24,0 chr1 156230412 . C . PASS END=156230412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 156230413 . C . PASS END=156230417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,64,255:20,0 chr1 156231124 . C . PASS END=156231199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:43:0,108,1620:0,115,255:40,0 chr1 156233186 . C . PASS END=156233350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:36:0,90,1350:0,108,255:40,0 chr1 156233351 . C . PASS END=156233355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,105,255:25,0 chr1 156233356 . C . PASS END=156233356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 156233357 . A . PASS END=156233361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 156235572 . C . PASS END=156235584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,856:0,72,255:24,0 chr1 156235585 . C . PASS END=156235591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 156235592 . A . PASS END=156235592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,0 chr1 156235593 . C . PASS END=156235593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 156235594 . A . PASS END=156235594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:29,0 chr1 156235595 . T . PASS END=156235597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 156235598 . C . PASS END=156235598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 156235599 . C . PASS END=156235619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1048:0,83,255:32,0 chr1 156235620 . T . PASS END=156235620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 156235621 . G . PASS END=156235643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:33:0,96,1296:0,99,255:38,0 chr1 156235644 . T . PASS END=156235645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1304:0,72,255:35,0 chr1 156235646 . G . PASS END=156235667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1258:0,86,255:34,0 chr1 156235668 . A . PASS END=156235676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 156235677 . C . PASS END=156235687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,61,255:19,0 chr1 156235688 . C . PASS END=156235692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156235693 . C . PASS END=156235706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr1 156235707 . T . PASS END=156235710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156235711 . G . PASS END=156235733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 156235734 . T . PASS END=156235735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 156235736 . G . PASS END=156235738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156235739 . A . PASS END=156235761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,876:0,69,255:23,0 chr1 156235762 . T . PASS END=156235762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 156235763 . G . PASS END=156235820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 156235821 . A . PASS END=156235830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 156235831 . C . PASS END=156235831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 156235832 . T . PASS END=156235845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1035:0,87,255:30,0 chr1 156235846 . A . PASS END=156235846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 156235847 . T . PASS END=156235848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156235849 . T . PASS END=156235849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 156235850 . T . PASS END=156235855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156235856 . T . PASS END=156235856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 156235857 . C . PASS END=156235862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156235863 . G . PASS END=156235863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 156235864 . G . PASS END=156235867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156235868 . T . PASS END=156235868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr1 156235869 . C . PASS END=156235869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 156235870 . C . PASS END=156235870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 156235871 . T . PASS END=156235874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1066:0,90,255:30,0 chr1 156235875 . T . PASS END=156235875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 156235876 . A . PASS END=156235884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:32,0 chr1 156235885 . C . PASS END=156235885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:27,0 chr1 156235886 . G . PASS END=156235889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 156235890 . C . PASS END=156235890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 156235891 . T . PASS END=156235892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156235893 . T . PASS END=156235893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 156235894 . T . PASS END=156235894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:27,0 chr1 156235895 . T . PASS END=156235895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156235896 . C . PASS END=156235896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 156235897 . A . PASS END=156235897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156235898 . G . PASS END=156235917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,917:0,62,255:26,0 chr1 156235918 . A . PASS END=156235918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 156235919 . C . PASS END=156235921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 156235922 . T . PASS END=156235922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 156235923 . C . PASS END=156235928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 156235929 . T . PASS END=156235946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,720:0,47,255:19,0 chr1 156235947 . C . PASS END=156235947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,659:0,8,255:15,1 chr1 156235948 . T . PASS END=156235948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:16,1 chr1 156235949 . G . PASS END=156235951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:28:21:0,28,702:0,28,255:15,1 chr1 156235952 . C . LowGQ END=156235953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:20:0,0,594:0,0,255:15,1 chr1 156235954 . C . PASS END=156235956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,615:0,40,255:16,0 chr1 156235957 . A . PASS END=156235957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:15,0 chr1 156235958 . C . PASS END=156235961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,675:0,41,255:18,0 chr1 156235962 . C . PASS END=156235962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156235963 . C . PASS END=156235965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 156235966 . G . PASS END=156235967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156235968 . C . PASS END=156235968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 156235969 . T . PASS END=156235993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:24,0 chr1 156235994 . A . PASS END=156235994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 156235995 . A . PASS END=156236001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 156236002 . A . PASS END=156236002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 156236003 . C . PASS END=156236023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,953:0,65,255:26,0 chr1 156236024 . A . PASS END=156236038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:29,0 chr1 156236039 . C . PASS END=156236039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 156236040 . G . PASS END=156236052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:30,0 chr1 156236053 . A . PASS END=156236053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:27,0 chr1 156236054 . C . PASS END=156236064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 156236065 . A . PASS END=156236065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 156236066 . G . PASS END=156236068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156236069 . A . PASS END=156236070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156236071 . C . PASS END=156236074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156236075 . C . PASS END=156236079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,836:0,67,255:26,0 chr1 156236080 . C . PASS END=156236082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156236083 . T . PASS END=156236083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 156236084 . C . PASS END=156236087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 156236088 . C . PASS END=156236088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 156236089 . C . PASS END=156236091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156236092 . A . PASS END=156236093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 156236094 . C . PASS END=156236095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 156236096 . A . PASS END=156236096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 156236097 . C . PASS END=156236099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156236100 . G . PASS END=156236100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr1 156236101 . G . PASS END=156236102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 156236103 . G . PASS END=156236125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 156236126 . T . PASS END=156236171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,590:0,44,255:19,0 chr1 156236332 . C . PASS END=156236469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:36:0,92,1302:0,92,255:40,0 chr1 156237261 . C . PASS END=156237267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,947:0,64,255:26,0 chr1 156237268 . C . PASS END=156237276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 156237277 . G . PASS END=156237277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 156237278 . T . PASS END=156237446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1260:0,84,255:40,0 chr1 156237447 . A . PASS END=156237447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:53:38:0,53,1251:0,53,255:31,0 chr1 156237448 . G . PASS END=156237458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1225:0,80,255:33,0 chr1 156237459 . A . PASS END=156237459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:29,0 chr1 156237460 . G . PASS END=156237468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:32,0 chr1 156237469 . G . PASS END=156237469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:27,0 chr1 156237906 . C . PASS END=156237974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,171,255:40,0 chr1 156238081 . C . PASS END=156238108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,126,255:40,0 chr1 156238109 . T . PASS END=156238109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1734:0,71,255:40,0 chr1 156238110 . C . PASS END=156238206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:32:0,80,1133:0,80,255:40,0 chr1 156242111 . C . PASS END=156242118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:24,0 chr1 156242119 . G . PASS END=156242119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 156242120 . T . PASS END=156242122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 156242123 . C . PASS END=156242123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 156242124 . A . PASS END=156242132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 156242133 . C . PASS END=156242133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:23,0 chr1 156242134 . T . PASS END=156242141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,939:0,64,255:26,0 chr1 156242142 . T . PASS END=156242143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,958:0,81,255:28,0 chr1 156242144 . T . PASS END=156242144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 156242145 . A . PASS END=156242160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 156242161 . C . PASS END=156242161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156242162 . A . PASS END=156242162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156242163 . G . PASS END=156242189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,978:0,78,255:26,0 chr1 156243152 . C . PASS END=156243232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:31:0,81,1188:0,85,255:40,0 chr1 156243233 . G . PASS END=156243233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 156243234 . A . PASS END=156243236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 156243237 . T . PASS END=156243241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 156244388 . A . PASS END=156244477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:37:0,93,1300:0,98,255:40,0 chr1 156246876 . C . PASS END=156246876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 156246877 . T . PASS END=156246890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1064:0,84,255:32,0 chr1 156246891 . T . PASS END=156246891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:31,0 chr1 156246892 . G . PASS END=156246928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:33:0,99,1211:0,99,255:40,0 chr1 156246929 . T . PASS END=156246929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1388:0,68,255:39,0 chr1 156246930 . G . PASS END=156247012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,90,255:40,0 chr1 156247013 . G . PASS END=156247013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 156247014 . T . PASS END=156247015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156247016 . C . PASS END=156247016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 156247017 . T . PASS END=156247021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 156247022 . C . PASS END=156247022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 156247023 . T . PASS END=156247024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156247025 . T . PASS END=156247032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr1 156247716 . C . PASS END=156247742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1148:0,85,255:34,0 chr1 156247743 . A . PASS END=156247743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr1 156247744 . A . PASS END=156247836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,89,255:40,0 chr1 156247837 . A . PASS END=156247839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1170:0,80,255:26,0 chr1 156248727 . T . PASS END=156248825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,137,255:40,0 chr1 156252398 . C . PASS END=156252401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 156252402 . A . PASS END=156252403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 156252404 . A . PASS END=156252437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1012:0,87,255:30,0 chr1 156252438 . C . PASS END=156252450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,71,255:27,0 chr1 156252451 . T . PASS END=156252471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,665:0,41,255:19,0 chr1 156255018 . A . PASS END=156255033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 156255034 . C . PASS END=156255048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 156255049 . A . PASS END=156255061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 156255062 . T . PASS END=156255074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 156255075 . A . PASS END=156255075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 156255076 . A . PASS END=156255088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 156255089 . G . PASS END=156255112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 156255113 . G . PASS END=156255116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 156255117 . G . PASS END=156255137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 156255138 . T . PASS END=156255139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 156255140 . C . PASS END=156255148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 156255149 . T . PASS END=156255149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 156255150 . G C, 50.00 PASS DP=10;MQ=250.00;MQRankSum=2.383;ReadPosRankSum=1.866;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,6,0:0.600,0.000:10:2,3,0:2,3,0:48:85,0,49,215,143,358:238,0,122:4,0:5.0000e+01,7.0152e-05,5.2126e+01,2.1460e+02,1.7782e+02,3.6065e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,3,3:3,1,2,4 chr1 156255151 . A . PASS END=156255167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 156255168 . T . LowGQ END=156255168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr1 156255169 . C . PASS END=156255179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 156255180 . T . PASS END=156255180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:10,0 chr1 156255181 . C . PASS END=156255187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 156255188 . A . PASS END=156255188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 156255189 . G . PASS END=156255247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,604:0,48,255:19,0 chr1 156255248 . C . PASS END=156255302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:24,0 chr1 156255303 . G . PASS END=156255303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 156255304 . A . PASS END=156255309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,925:0,78,255:26,0 chr1 156255310 . A . PASS END=156255316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156255317 . G . PASS END=156255339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 156255340 . C . PASS END=156255340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 156255341 . C . PASS END=156255351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr1 156255352 . A . PASS END=156255352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 156255353 . G . PASS END=156255374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 156255375 . C . PASS END=156255375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156255376 . T . PASS END=156255376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr1 156255377 . G . PASS END=156255377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156255378 . C . PASS END=156255407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,676:0,43,255:19,0 chr1 156255408 . C . PASS END=156255409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156255410 . T . PASS END=156255413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,715:0,49,255:19,0 chr1 156255414 . G . PASS END=156255414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 156255415 . A . PASS END=156255420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:22,0 chr1 156255421 . A . PASS END=156255421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:21,0 chr1 156255422 . G . PASS END=156255425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 156255426 . A . PASS END=156255426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:18,0 chr1 156255427 . T . PASS END=156255431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:18,0 chr1 156255432 . C . PASS END=156255432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:18,0 chr1 156255433 . G . PASS END=156255448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,638:0,44,255:19,0 chr1 156255449 . C . PASS END=156255449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:15,0 chr1 156255450 . C . PASS END=156255457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:18:0,42,630:0,44,255:15,0 chr1 156255458 . G . PASS END=156255459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:20:17:0,20,567:0,20,255:15,0 chr1 156255460 . G . PASS END=156255460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 156255461 . C . PASS END=156255463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 156255464 . T . PASS END=156255464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156255465 . G . PASS END=156255465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr1 156255466 . A . PASS END=156255466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 156255467 . G . PASS END=156255467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 156255468 . G . PASS END=156255468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 156255469 . C . PASS END=156255469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 156255470 . A . PASS END=156255470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 156255471 . G . PASS END=156255471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156255472 . G . PASS END=156255473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 156255474 . G . PASS END=156255474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr1 156255475 . A . PASS END=156255475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 156255476 . G . PASS END=156255476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 156255477 . G . PASS END=156255517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:18,0 chr1 156255518 . C . PASS END=156255525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 156255526 . C . PASS END=156255526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156255527 . T . PASS END=156255531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 156255532 . G . PASS END=156255532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 156255533 . C . PASS END=156255539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 156255540 . G . PASS END=156255540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 156255541 . C . PASS END=156255549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,925:0,67,255:26,0 chr1 156255550 . T . PASS END=156255550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156255551 . G . PASS END=156255564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 156255565 . G . PASS END=156255577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156255578 . G . PASS END=156255583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 156255584 . C . PASS END=156255584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156255585 . G . PASS END=156255591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,998:0,68,255:26,0 chr1 156255592 . G . PASS END=156255597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr1 156255598 . A . PASS END=156255634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1169:0,80,255:38,0 chr1 156255635 . C G, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=3.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,21,0:0.553,0.000:38:11,8,0:6,13,0:47:85,0,46,185,185,185:255,0,255:18,0:5.0000e+01,9.3967e-05,4.9348e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,12,5,16:5,12,10,11 chr1 156255636 . G . PASS END=156255637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1197:0,81,255:38,0 chr1 156255638 . A . PASS END=156255638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1164:0,64,255:34,0 chr1 156255639 . C . PASS END=156255672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1191:0,81,255:37,0 chr1 156255673 . A . PASS END=156255686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 156255687 . T . PASS END=156255687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,874:0,62,255:27,0 chr1 156255688 . T . PASS END=156255693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156255694 . T . PASS END=156255694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 156255695 . C . PASS END=156255702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156255703 . T . PASS END=156255703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 156255704 . G . PASS END=156255711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1031:0,84,255:28,0 chr1 156255712 . T . PASS END=156255712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 156255713 . G . PASS END=156255721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 156255722 . C . PASS END=156255734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:25,0 chr1 156255735 . C . PASS END=156255740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:25:0,44,810:0,44,255:19,0 chr1 156255741 . T . PASS END=156255741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:19,0 chr1 156255742 . G . PASS END=156255757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,675:0,41,255:19,0 chr1 156255758 . C . PASS END=156255764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 156255765 . A . PASS END=156255769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:13:0,21,315:0,39,255:9,0 chr1 156255770 . G . PASS END=156255774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:18:13:0,18,270:0,39,255:6,0 chr1 156256051 . G . PASS END=156256099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,537:0,44,255:19,0 chr1 156256100 . C . PASS END=156256100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156256101 . T . PASS END=156256103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,751:0,50,255:20,0 chr1 156256104 . G . PASS END=156256107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 156256108 . A . PASS END=156256108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr1 156256109 . G . PASS END=156256109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156256110 . C . PASS END=156256112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 156256113 . C . PASS END=156256113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:19,0 chr1 156256114 . G . PASS END=156256115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156256116 . C . PASS END=156256116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 156256117 . G . PASS END=156256119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156256120 . A . PASS END=156256120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 156256121 . G . PASS END=156256134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,838:0,61,255:26,0 chr1 156256135 . G . PASS END=156256137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 156256138 . G . PASS END=156256140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 156256141 . A . PASS END=156256157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:30,0 chr1 156256158 . C . PASS END=156256158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:29,0 chr1 156256159 . A . PASS END=156256254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1046:0,87,255:39,0 chr1 156256255 . C . PASS END=156256255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 156256256 . C . PASS END=156256261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 156256262 . C . PASS END=156256264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 156261176 . G . PASS END=156261210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:19,0 chr1 156261211 . C . PASS END=156261214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 156261215 . C . PASS END=156261215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156261216 . C . PASS END=156261222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,886:0,69,255:24,0 chr1 156261223 . T . PASS END=156261223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 156261224 . C . PASS END=156261237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 156261238 . C . PASS END=156261238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 156261239 . G . PASS END=156261258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 156261259 . T . PASS END=156261259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:22,0 chr1 156261260 . G . PASS END=156261264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156261265 . T . PASS END=156261265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:21,0 chr1 156261266 . G . PASS END=156261266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156261267 . T . PASS END=156261267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 156261268 . G . PASS END=156261283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,861:0,61,255:24,0 chr1 156261284 . G . PASS END=156261285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,672:0,41,255:23,0 chr1 156261286 . T . PASS END=156261299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,951:0,65,255:26,0 chr1 156261300 . G . PASS END=156261300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 156261301 . A . PASS END=156261306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:70:27:0,70,934:0,70,255:26,0 chr1 156261307 . T . PASS END=156261307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156261308 . G . PASS END=156261316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,73,255:25,0 chr1 156261317 . C . PASS END=156261317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:22,0 chr1 156261318 . A . PASS END=156261323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 156261324 . A . PASS END=156261324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:24,0 chr1 156261325 . G . PASS END=156261333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 156261334 . A . PASS END=156261337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:45:25:0,45,795:0,45,255:23,0 chr1 156261338 . C . PASS END=156261353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:24,0 chr1 156261354 . T . PASS END=156261354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 156261355 . C . PASS END=156261363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,68,255:26,0 chr1 156261364 . A . PASS END=156261368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 156261369 . A . PASS END=156261422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:22:0,60,900:0,62,255:26,0 chr1 156261423 . G . PASS END=156261423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 156261424 . C . PASS END=156261428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156261429 . T . PASS END=156261448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 156262803 . T . PASS END=156262804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 156262805 . A . PASS END=156262805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 156262806 . G . PASS END=156262821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,861:0,69,255:23,0 chr1 156262822 . C . PASS END=156262822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 156262823 . A . PASS END=156262826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 156262827 . A . PASS END=156262827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:22,0 chr1 156262828 . G . PASS END=156262828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 156262829 . C . PASS END=156262829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,780:0,58,255:22,0 chr1 156262830 . G . PASS END=156262835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 156262836 . T . PASS END=156262836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 156262837 . A . PASS END=156262842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 156262843 . T . PASS END=156262843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 156262844 . G . PASS END=156262846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:25,0 chr1 156262847 . C . PASS END=156262852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 156262853 . C . PASS END=156262853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 156262854 . T . PASS END=156262907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:30:0,82,1131:0,82,255:39,0 chr1 156262908 . A . PASS END=156262908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1243:0,48,255:34,0 chr1 156262909 . G . PASS END=156262910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:96:42:0,96,1512:0,96,255:38,0 chr1 156262911 . C . PASS END=156262911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:37,0 chr1 156262912 . C . PASS END=156262924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:40:0,82,1443:0,82,255:38,0 chr1 156262925 . G . PASS END=156262925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1433:0,76,255:34,0 chr1 156262926 . G . PASS END=156262931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:38:0,85,1358:0,85,255:36,0 chr1 156262932 . G . PASS END=156262932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 156262933 . C . PASS END=156262933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1307:0,97,255:35,0 chr1 156262934 . C . PASS END=156262934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr1 156262935 . A . PASS END=156262940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1305:0,81,255:36,0 chr1 156262941 . C . PASS END=156262941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr1 156262942 . C . PASS END=156262971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:37:0,82,1366:0,82,255:38,0 chr1 156262972 . G . PASS END=156262973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:77:36:0,77,1304:0,77,255:32,0 chr1 156262974 . G . PASS END=156262976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:33,0 chr1 156262977 . A . PASS END=156262978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:71:34:0,71,1210:0,71,255:32,0 chr1 156262979 . G . PASS END=156262980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1371:0,84,255:36,0 chr1 156262981 . C . PASS END=156262981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 156262982 . C . PASS END=156262996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1303:0,83,255:36,0 chr1 156262997 . C . PASS END=156262997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:32,0 chr1 156262998 . G . PASS END=156263000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1340:0,81,255:35,0 chr1 156263111 . C . PASS END=156263364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:37:0,81,1386:0,81,255:40,0 chr1 156263365 . C . PASS END=156263365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:30,0 chr1 156263366 . A . PASS END=156263367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 156263409 . C . PASS END=156263472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1148:0,85,255:34,0 chr1 156263473 . G . PASS END=156263474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 156263475 . G . PASS END=156263478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1215:0,95,255:28,0 chr1 156263479 . T . PASS END=156263501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 156263781 . C . PASS END=156263986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:37:0,81,1421:0,81,255:40,0 chr1 156263987 . G . PASS END=156263988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 156263989 . G . PASS END=156263991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,108,255:27,0 chr1 156263992 . T . PASS END=156264027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 156264156 . C . PASS END=156264157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156264158 . T . PASS END=156264158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 156264159 . G . PASS END=156264162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:31,0 chr1 156264163 . G . PASS END=156264163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,984:0,43,255:28,0 chr1 156264164 . C . PASS END=156264164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 156264165 . C . PASS END=156264165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 156264166 . A . PASS END=156264169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 156264170 . T . PASS END=156264172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:30,0 chr1 156264173 . C . PASS END=156264173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 156264174 . A . PASS END=156264174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr1 156264175 . T . PASS END=156264356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:85:31:0,85,1052:0,85,255:40,0 chr1 156264467 . C . PASS END=156264676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:31:0,84,1038:0,93,255:40,0 chr1 156264677 . G . PASS END=156264708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 156264709 . G . PASS END=156264709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156264710 . C . PASS END=156264711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 156264712 . C . PASS END=156264776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:19,0 chr1 156264777 . C . PASS END=156264777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:14,0 chr1 156264778 . C . PASS END=156264778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156264779 . A . PASS END=156264779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 156264780 . G . PASS END=156264791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,550:0,45,255:15,0 chr1 156264792 . T . PASS END=156264802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 156264803 . G . PASS END=156264807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 156265317 . C . PASS END=156265317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 156265318 . T . PASS END=156265318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 156265319 . G . PASS END=156265326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 156265327 . T . PASS END=156265327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 156265328 . T . PASS END=156265329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 156265330 . T . PASS END=156265330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 156265331 . C . PASS END=156265335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 156265336 . A . PASS END=156265336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 156265337 . G . PASS END=156265337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156265338 . C . PASS END=156265342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156265343 . C . PASS END=156265343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 156265344 . A . PASS END=156265344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156265345 . A . PASS END=156265345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:14,0 chr1 156265346 . A . LowGQ END=156265346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,326:19,0,255:14,0 chr1 156265347 . T . PASS END=156265347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,541:0,34,255:15,0 chr1 156265348 . G . PASS END=156265351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 156265352 . C . PASS END=156265352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 156265353 . T . PASS END=156265353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 156265354 . G . PASS END=156265354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:16,0 chr1 156265355 . C . LowGQ END=156265355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,435:18,0,255:15,0 chr1 156265356 . A . PASS END=156265360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,544:0,40,255:19,0 chr1 156265361 . G . PASS END=156265361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,582:0,27,255:18,0 chr1 156265362 . A . PASS END=156265362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 156265363 . A . PASS END=156265363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,537:0,27,255:18,0 chr1 156265364 . G . PASS END=156265364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,482:0,10,255:17,0 chr1 156265365 . T . PASS END=156265369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,624:0,60,255:20,0 chr1 156265370 . T . PASS END=156265370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:20:0,26,515:0,26,255:18,0 chr1 156265371 . C . PASS END=156265372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:20,0 chr1 156265373 . A . PASS END=156265374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,679:0,63,255:21,0 chr1 156265375 . A . PASS END=156265375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,515:0,13,255:16,0 chr1 156265376 . G . PASS END=156265380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:19,0 chr1 156265381 . A . LowGQ END=156265381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,463:20,0,255:13,0 chr1 156265382 . G . PASS END=156265392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,524:0,40,255:18,0 chr1 156265393 . G . PASS END=156265394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,499:0,24,255:16,0 chr1 156265395 . A . PASS END=156265398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,532:0,40,255:18,0 chr1 156265399 . T . PASS END=156265400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:20:18:0,20,423:0,20,255:16,0 chr1 156265401 . C . PASS END=156265401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,537:0,15,255:16,0 chr1 156265402 . C . PASS END=156265411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 156265412 . A . PASS END=156265412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 156265413 . G . PASS END=156265418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 156265419 . C . PASS END=156265436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,553:0,48,255:16,0 chr1 156268561 . T . PASS END=156268562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 156268563 . A . PASS END=156268563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 156268564 . G . PASS END=156268575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1039:0,81,255:40,0 chr1 156268576 . C . PASS END=156268576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:40,0 chr1 156268577 . A . PASS END=156268692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:38:0,81,1215:0,100,255:40,0 chr1 156268693 . G . PASS END=156268693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr1 156268694 . C . PASS END=156268709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1057:0,87,255:29,0 chr1 156268710 . T . PASS END=156268733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 156268734 . G . PASS END=156268736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156268737 . T . PASS END=156268738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 156268739 . A . PASS END=156268752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 156268753 . C . PASS END=156268781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,64,255:26,0 chr1 156268782 . G . PASS END=156268782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:21,0 chr1 156268783 . C . PASS END=156268790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 156268791 . G . PASS END=156268791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 156268792 . T . PASS END=156268856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,870:0,65,255:26,0 chr1 156268857 . A . PASS END=156268857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 156268858 . T . PASS END=156268942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,861:0,62,255:26,0 chr1 156268943 . G . PASS END=156268945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 156268946 . T . PASS END=156268949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156268950 . A . PASS END=156268965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 156268966 . C . PASS END=156268966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 156268967 . G . PASS END=156268967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:11,0 chr1 156268968 . C . PASS END=156268973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:19:0,30,450:0,40,255:11,0 chr1 156268974 . A . PASS END=156268974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:9,0 chr1 156268975 . G . PASS END=156268980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:11,0 chr1 156278990 . T . PASS END=156278997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr1 156278998 . G . PASS END=156278998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 156278999 . G . PASS END=156279004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:25,0 chr1 156279005 . A . PASS END=156279005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 156279006 . T . PASS END=156279038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,885:0,62,255:26,0 chr1 156279039 . C . PASS END=156279039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 156279040 . C . PASS END=156279042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156279043 . T . PASS END=156279043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156279044 . C . PASS END=156279050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,742:0,66,255:23,0 chr1 156279051 . T . PASS END=156279052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156279053 . G . PASS END=156279054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156279055 . C . PASS END=156279066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:20:0,44,704:0,44,255:19,0 chr1 156279067 . C . PASS END=156279069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 156279070 . C . PASS END=156279094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,43,255:19,0 chr1 156280349 . C . PASS END=156280356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 156280357 . C . PASS END=156280357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 156280358 . T . PASS END=156280442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1103:0,83,255:36,0 chr1 156280443 . A . PASS END=156280461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:26,0 chr1 156280462 . T . PASS END=156280462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:19,0 chr1 156280463 . C . PASS END=156280463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 156280464 . T . PASS END=156280480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,576:0,40,255:19,0 chr1 156280741 . C . PASS END=156280750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,635:0,51,255:17,0 chr1 156280751 . G . PASS END=156280751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 156280752 . T . PASS END=156280760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:17,0 chr1 156280761 . G . PASS END=156280763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156280764 . T . PASS END=156280771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 156280772 . G . PASS END=156280775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 156280776 . C . PASS END=156280784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 156280785 . G . PASS END=156280842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,790:0,62,255:26,0 chr1 156280843 . T . PASS END=156280853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr1 156280854 . T . PASS END=156280854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 156280855 . C . PASS END=156280875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 156280876 . C . PASS END=156280900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,930:0,72,255:26,0 chr1 156280901 . G . PASS END=156280901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 156280902 . A . PASS END=156280915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 156280916 . G . PASS END=156280919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156280920 . C . PASS END=156280922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 156280923 . G . PASS END=156280924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156280925 . T . PASS END=156280944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:23:0,61,861:0,61,255:25,0 chr1 156280945 . G . PASS END=156280945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 156280946 . C . PASS END=156280962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,876:0,66,255:23,0 chr1 156280963 . A . PASS END=156280971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 156280972 . G . PASS END=156280972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:17,0 chr1 156280973 . T . PASS END=156280981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 156280982 . A . PASS END=156280982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156280983 . C . PASS END=156280986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156281832 . C . PASS END=156281835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:30,0 chr1 156281836 . A . PASS END=156281837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:29,0 chr1 156281838 . A . PASS END=156281847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,953:0,90,255:31,0 chr1 156281848 . C . PASS END=156281848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 156281849 . T . PASS END=156282009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:31:0,81,1215:0,93,255:40,0 chr1 156282010 . G . PASS END=156282012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,103,255:25,0 chr1 156286957 . C . PASS END=156287038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,120,1800:0,125,255:40,0 chr1 156287206 . C . PASS END=156287212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1133:0,87,255:30,0 chr1 156287213 . G . PASS END=156287213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 156287214 . C . PASS END=156287216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 156287217 . T . PASS END=156287217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 156287218 . T . PASS END=156287338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:30:0,83,1194:0,83,255:40,0 chr1 156288659 . C . PASS END=156288660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 156288661 . G . PASS END=156288661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 156288662 . G . PASS END=156288672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156288673 . T . PASS END=156288677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 156288678 . T . PASS END=156288678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 156288679 . A . PASS END=156288683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156288684 . A . PASS END=156288694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,615:0,43,255:19,0 chr1 156288695 . C . PASS END=156288719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,845:0,66,255:26,0 chr1 156288720 . A . PASS END=156288727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 156288728 . C . PASS END=156288733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 156288734 . A . PASS END=156288735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156288736 . G . PASS END=156288767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 156288768 . C . PASS END=156288784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 156288785 . G . PASS END=156288808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 156290630 . C . PASS END=156290636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156290637 . A . PASS END=156290637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 156290638 . C . PASS END=156290648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:31,0 chr1 156290649 . T . PASS END=156290649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr1 156290650 . T . PASS END=156290651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1178:0,93,255:32,0 chr1 156290652 . T . PASS END=156290652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:31,0 chr1 156290653 . T . PASS END=156290811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1084:0,85,255:40,0 chr1 156290812 . G . PASS END=156290816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 156294763 . C . PASS END=156294763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 156294764 . T . PASS END=156294765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 156294766 . A . PASS END=156294777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:25,0 chr1 156294778 . G . PASS END=156294855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1125:0,90,255:39,0 chr1 156294856 . T . PASS END=156294880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,900:0,61,255:26,0 chr1 156303338 . C . PASS END=156303434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,120,1800:0,122,255:40,0 chr1 156304504 . C . PASS END=156304566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,154,255:40,0 chr1 156304659 . C . PASS END=156304709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,156,255:40,0 chr1 156305618 . C . PASS END=156305679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,157,255:40,0 chr1 156307945 . T . PASS END=156307975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,99,1520:0,99,255:40,0 chr1 156308531 . A . PASS END=156308547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,102,1357:0,108,255:36,0 chr1 156308548 . C . PASS END=156308548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1278:0,70,255:32,0 chr1 156308549 . G . PASS END=156308561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:36,0 chr1 156309526 . G . PASS END=156309582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,120,1800:0,127,255:40,0 chr1 156314371 . T . PASS END=156314376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 156314377 . C . PASS END=156314377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 156314378 . C . PASS END=156314386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 156314387 . A . PASS END=156314391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 156314392 . A . PASS END=156314445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1086:0,84,255:40,0 chr1 156314446 . C . PASS END=156314446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 156314447 . A . PASS END=156314491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1188:0,81,255:37,0 chr1 156314492 . G . PASS END=156314492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:29,0 chr1 156314493 . C . PASS END=156314499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr1 156316559 . T . PASS END=156316560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 156316561 . G . PASS END=156316573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 156316574 . A . PASS END=156316574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 156316575 . G . PASS END=156316587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,74,255:26,0 chr1 156316588 . C . PASS END=156316588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156316589 . T . PASS END=156316589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:27,0 chr1 156316590 . C . PASS END=156316651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:32:0,92,1129:0,92,255:38,0 chr1 156316652 . T . PASS END=156316652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:34,0 chr1 156316653 . T . PASS END=156316713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1116:0,87,255:36,0 chr1 156316714 . T . PASS END=156316729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr1 156316730 . C . PASS END=156316731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156316732 . C . PASS END=156316732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156316733 . C . PASS END=156316740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,798:0,53,255:19,0 chr1 156316741 . T . PASS END=156316741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:17,0 chr1 156316742 . T . PASS END=156316767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,657:0,41,255:19,0 chr1 156316768 . A . PASS END=156316773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 156335846 . A . PASS END=156335846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 156335847 . T . PASS END=156335863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:26,0 chr1 156335864 . T . PASS END=156335874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1194:0,93,255:33,0 chr1 156335875 . G . PASS END=156335876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:33:0,64,1210:0,64,255:32,0 chr1 156335877 . C . PASS END=156335905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1202:0,83,255:40,0 chr1 156335906 . G . PASS END=156335906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1340:0,77,255:40,0 chr1 156335907 . C . PASS END=156336006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:84:33:0,84,1260:0,99,255:40,0 chr1 156336007 . C . PASS END=156336010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,93,255:24,0 chr1 156336011 . T . PASS END=156336011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:22,0 chr1 156336012 . C . PASS END=156336012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:22,0 chr1 156336013 . C . PASS END=156336014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1093:0,57,255:22,0 chr1 156336015 . T . PASS END=156336015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 156336016 . A . PASS END=156336017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:22,0 chr1 156336018 . T . PASS END=156336018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 156336019 . G . PASS END=156336019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 156336020 . T . PASS END=156336021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 156336022 . T . PASS END=156336022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:19,0 chr1 156336023 . G . PASS END=156336023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156337535 . A . PASS END=156337637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,130,255:40,0 chr1 156337808 . A . PASS END=156337862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,190,255:40,0 chr1 156339041 . A . PASS END=156339047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 156339048 . G . PASS END=156339048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156339049 . G . PASS END=156339049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 156339050 . T . PASS END=156339050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,304:0,2,255:9,0 chr1 156339051 . C . PASS END=156339051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 156339052 . T . PASS END=156339054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156339055 . T . PASS END=156339055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 156339056 . A . PASS END=156339056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156339057 . G . PASS END=156339057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 156339058 . C . PASS END=156339062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156339063 . C . PASS END=156339081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr1 156339082 . G . PASS END=156339083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,324:0,14,255:10,0 chr1 156339084 . T . PASS END=156339089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,441:0,36,255:13,0 chr1 156339090 . T . PASS END=156339090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 156339091 . G . PASS END=156339097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 156339098 . C . PASS END=156339098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr1 156339099 . T . PASS END=156339099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 156339100 . C . PASS END=156339100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:15,0 chr1 156339101 . T . PASS END=156339102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 156339103 . C . PASS END=156339103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 156339104 . C . LowGQ END=156339104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,541:1,0,255:16,0 chr1 156339105 . T . PASS END=156339105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 156339106 . C . PASS END=156339107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 156339108 . A . PASS END=156339108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,443:0,4,255:15,0 chr1 156339109 . G . PASS END=156339112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 156339113 . G . PASS END=156339113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 156339114 . C . PASS END=156339116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 156339117 . C . PASS END=156339117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:17,0 chr1 156339118 . T . PASS END=156339118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,639:0,57,255:19,0 chr1 156339119 . G . PASS END=156339120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156339121 . C . PASS END=156339121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 156339122 . G . PASS END=156339126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr1 156339127 . C . LowGQ END=156339127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,455:45,0,255:14,0 chr1 156339128 . T . PASS END=156339131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156339132 . C . LowGQ END=156339132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,510:6,0,255:15,0 chr1 156339133 . T . PASS END=156339133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 156339134 . G . LowGQ END=156339134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,508:20,0,255:16,0 chr1 156339135 . T . PASS END=156339135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 156339136 . C . PASS END=156339136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,568:0,30,255:19,0 chr1 156339137 . T . PASS END=156339140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 156339141 . T . PASS END=156339141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,595:0,46,255:20,0 chr1 156339142 . C . PASS END=156339144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 156339145 . C . PASS END=156339145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,584:0,15,255:19,0 chr1 156339146 . T . PASS END=156339146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr1 156339147 . A . PASS END=156339147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 156339148 . C . PASS END=156339148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:19,0 chr1 156339149 . A . PASS END=156339153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156339154 . C . PASS END=156339154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,576:0,30,255:18,0 chr1 156339155 . A . PASS END=156339157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156339158 . A . PASS END=156339158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,532:0,29,255:17,0 chr1 156339159 . C . PASS END=156339164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156339165 . C . PASS END=156339219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,621:0,51,255:18,0 chr1 156339220 . C . PASS END=156339227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,38,255:13,0 chr1 156347092 . G . PASS END=156347093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:17,0 chr1 156347094 . T . PASS END=156347108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 156347109 . G . PASS END=156347120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,831:0,63,255:23,0 chr1 156347121 . G . PASS END=156347121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 156347122 . T . PASS END=156347130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,720:0,69,255:23,0 chr1 156347131 . G A, 45.30 PASS DP=23;MQ=250.00;MQRankSum=3.841;ReadPosRankSum=2.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:8,1,0:7,7,0:45:80,0,50,278,528,807:219,0,255:15,0:4.5298e+01,1.4988e-04,5.3000e+01,2.7804e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,3,5:10,5,4,4 chr1 156347132 . C . PASS END=156347137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 156347138 . C . PASS END=156347138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 156347139 . A . PASS END=156347142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156347143 . T . PASS END=156347143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 156347144 . C . PASS END=156347168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:26,0 chr1 156347169 . A . PASS END=156347174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr1 156347175 . G . PASS END=156347176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156347177 . C . PASS END=156347177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:26,0 chr1 156347178 . T . PASS END=156347178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 156347179 . T . PASS END=156347197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 156347198 . C . PASS END=156347198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 156347199 . T . PASS END=156347199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,896:0,84,255:28,0 chr1 156347200 . T . PASS END=156347219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 156347220 . C . PASS END=156347235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:18,0 chr1 156347236 . T . PASS END=156347236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:14,0 chr1 156347237 . C . PASS END=156347250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr1 156347251 . G . PASS END=156347266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,540:0,32,255:13,0 chr1 156347267 . T . PASS END=156347278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 156347781 . C . PASS END=156347877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,99,1343:0,99,255:40,0 chr1 156347878 . C . PASS END=156347878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:47:45:0,47,1479:0,47,255:34,0 chr1 156347879 . T . PASS END=156347889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:40:0,96,1445:0,96,255:38,0 chr1 156347890 . C . PASS END=156347890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1349:0,73,255:34,0 chr1 156347891 . T . PASS END=156347902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1319:0,81,255:37,0 chr1 156347903 . A . PASS END=156347903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:37:39:0,37,1194:0,37,255:28,0 chr1 156347904 . T . PASS END=156347904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1223:0,61,255:30,0 chr1 156347905 . G . PASS END=156347907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1252:0,84,255:31,0 chr1 156347908 . T . PASS END=156347908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1141:0,75,255:30,0 chr1 156347909 . T . PASS END=156347909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:38:0,96,1440:0,98,255:31,0 chr1 156347910 . T . PASS END=156347910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:30,0 chr1 156347911 . G . PASS END=156347911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:31,0 chr1 156347912 . T . PASS END=156347912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1132:0,50,255:31,0 chr1 156347913 . G . PASS END=156347913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 156347914 . C . PASS END=156347914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1089:0,49,255:30,0 chr1 156347915 . T . PASS END=156347916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:32,0 chr1 156347917 . C . PASS END=156347917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1047:0,30,255:29,0 chr1 156347918 . T . PASS END=156347918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1180:0,85,255:31,0 chr1 156347919 . T . PASS END=156347919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:24:34:0,24,1019:0,24,255:30,0 chr1 156347920 . C . PASS END=156347920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:30,0 chr1 156347921 . A . PASS END=156347921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:29,0 chr1 156347922 . T . PASS END=156347922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:24:34:0,24,1066:0,24,255:27,0 chr1 156347923 . C . PASS END=156347923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1055:0,52,255:26,0 chr1 156347924 . T . PASS END=156347924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:8:34:0,8,1039:0,8,255:25,0 chr1 156347925 . C . PASS END=156347925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:26,0 chr1 156347926 . C . LowGQ END=156347927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:0:33:0,0,882:0,0,255:23,1 chr1 156347928 . G . PASS END=156347930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:27,0 chr1 156347931 . G . PASS END=156347931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 156348043 . G . PASS END=156348043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156348044 . T . PASS END=156348044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 156348045 . G . PASS END=156348051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156348052 . G . PASS END=156348055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156348056 . G . PASS END=156348057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 156348058 . G . PASS END=156348058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156348059 . G . PASS END=156348059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 156348060 . C . PASS END=156348162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,91,255:40,0 chr1 156348163 . T . PASS END=156348168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 156348169 . T . PASS END=156348169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:24,0 chr1 156348170 . C . PASS END=156348190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 156351138 . G . PASS END=156351183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:19,0 chr1 156351184 . C . PASS END=156351188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 156351189 . C . PASS END=156351189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156351190 . G . PASS END=156351190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 156351191 . C . PASS END=156351219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 156351220 . C . PASS END=156351291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,615:0,45,255:19,0 chr1 156351292 . G . PASS END=156351304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 156351597 . G . PASS END=156351597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 156351598 . T . PASS END=156351598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 156351599 . C . PASS END=156351602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 156351603 . A . PASS END=156351603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 156351604 . T . PASS END=156351604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156351605 . C . PASS END=156351605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 156351606 . C . PASS END=156351612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156351613 . C . PASS END=156351613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr1 156351614 . A . PASS END=156351615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 156351616 . C . PASS END=156351618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 156351619 . T . PASS END=156351619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr1 156351620 . G . PASS END=156351649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,770:0,66,255:25,0 chr1 156351650 . T . PASS END=156351650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 156351651 . G . PASS END=156351657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 156351658 . T . PASS END=156351658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 156351659 . G . PASS END=156351684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:24,0 chr1 156351685 . C . PASS END=156351696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr1 156351697 . C . PASS END=156351703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 156351704 . T . PASS END=156351715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,721:0,57,255:19,0 chr1 156351716 . G . PASS END=156351723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 156351724 . A . PASS END=156351734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,59,255:19,0 chr1 156351859 . C . PASS END=156351873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr1 156351874 . A . PASS END=156351874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 156351875 . A . PASS END=156351892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,625:0,41,255:19,0 chr1 156351893 . C . PASS END=156351900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 156351901 . G . PASS END=156351944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,1 chr1 156351945 . G . PASS END=156351945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 156351946 . G . PASS END=156351949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156351950 . T . PASS END=156351951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 156351952 . C . PASS END=156351952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156351953 . T . PASS END=156351954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:14,0 chr1 156351955 . G . PASS END=156351955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:13,0 chr1 156351956 . T . PASS END=156351956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156351957 . G . PASS END=156351957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr1 156351958 . G . PASS END=156351958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156351959 . C . PASS END=156351959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156351960 . T . PASS END=156351960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 156351961 . G . PASS END=156351961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 156351962 . G . PASS END=156351962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156351963 . A . PASS END=156351963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 156351964 . C . PASS END=156351964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr1 156351965 . T . PASS END=156351965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 156351966 . T . PASS END=156351966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156351967 . G . PASS END=156351967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr1 156351968 . C . PASS END=156351968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:14,0 chr1 156351969 . C . PASS END=156351969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156351970 . A . PASS END=156351970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156351971 . C . PASS END=156351971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 156351972 . C . PASS END=156351983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 156351984 . C . PASS END=156351992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 156352539 . C . PASS END=156352541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 156352542 . G . PASS END=156352542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 156352543 . G . PASS END=156352561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,398:0,36,255:13,0 chr1 156352562 . T . PASS END=156352562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 156352563 . A . PASS END=156352563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 156352564 . G . PASS END=156352567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 156352568 . A . PASS END=156352568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr1 156352569 . G . PASS END=156352579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr1 156352580 . G . PASS END=156352587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr1 156352588 . T . PASS END=156352588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:22,0 chr1 156352589 . C . PASS END=156352592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 156352593 . G . PASS END=156352594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 156352595 . C . PASS END=156352632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:22,0 chr1 156352633 . T . PASS END=156352634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,611:0,49,255:20,0 chr1 156352635 . T . PASS END=156352638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156352639 . T . PASS END=156352660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 156354082 . G . PASS END=156354134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,162,255:40,0 chr1 156354318 . G . PASS END=156354325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:15:29:0,15,225:0,71,255:5,0 chr1 156354326 . C . LowGQ END=156354346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:30,0:30:0:29:0,0,0:0,74,255:3,0 chr1 156354347 . TC T, 142.57 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,11,0:0,21,0:93:168,96,0,724,96,724:255,57,0:0,44:1.4257e+02,9.2573e+01,0.0000e+00,4.5000e+02,1.2734e+02,4.5000e+02:0.00,22.00,25.00,34.77,56.77,37.77:0,0,15,17:0,0,14,18 chr1 156354349 . C . LowGQ END=156354349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,31:34:0:34:0,0,0:255,0,14:33,0 chr1 156354350 . C . PASS END=156354354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 156354355 . C . PASS END=156354356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 156354357 . G . PASS END=156354366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1286:0,89,255:34,0 chr1 156354367 . A G, 151.42 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,11,0:0,24,0:101:189,104,0,1298,104,1298:255,105,0:0,0:1.5142e+02,1.0142e+02,0.0000e+00,4.5000e+02,1.3619e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,16,19 chr1 156354368 . C . PASS END=156354373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1239:0,89,255:33,0 chr1 156354374 . G . PASS END=156354374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1117:0,72,255:32,0 chr1 156354375 . G . PASS END=156354382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1243:0,102,255:34,0 chr1 156354383 . T . PASS END=156354385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:34:0,69,1174:0,69,255:33,0 chr1 156354386 . C . PASS END=156354392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,85,255:31,0 chr1 156354569 . G . PASS END=156354580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1312:0,105,255:35,0 chr1 156354581 . C . PASS END=156354581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 156354582 . A . PASS END=156354629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,95,255:36,0 chr1 156354630 . A . PASS END=156354637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1125:0,93,255:26,0 chr1 156374318 . T . PASS END=156374389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:75:0,120,1800:0,196,255:40,0 chr1 156374390 . T . PASS END=156374393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,197,255:40,0 chr1 156376872 . C . PASS END=156376974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:32:0,93,1385:0,96,255:40,0 chr1 156376975 . A . PASS END=156376975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 156376976 . G . PASS END=156376978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 156376979 . C . PASS END=156376979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr1 156376980 . A . PASS END=156376989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1296:0,92,255:36,0 chr1 156377634 . T . PASS END=156377767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,105,1421:0,106,255:40,0 chr1 156379409 . C . PASS END=156379414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,969:0,75,255:25,0 chr1 156379415 . G . PASS END=156379415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:24,0 chr1 156379416 . G . PASS END=156379420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156379421 . C . PASS END=156379439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:29,0 chr1 156379440 . A . PASS END=156379440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 156379441 . G . PASS END=156379448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 156379449 . T . PASS END=156379464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 156382314 . A . PASS END=156382386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,154,255:40,0 chr1 156383205 . T . PASS END=156383210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 156383211 . A . PASS END=156383211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 156383212 . A . PASS END=156383229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 156383230 . G . PASS END=156383230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 156383231 . C . PASS END=156383254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 156383255 . T . PASS END=156383278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 156383279 . A . PASS END=156383289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,50,255:18,0 chr1 156384446 . C . PASS END=156384522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:40,0 chr1 156384523 . A . PASS END=156384545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:26,0 chr1 156386561 . C . PASS END=156386631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:41:0,105,1575:0,122,255:40,0 chr1 156391347 . A . PASS END=156391366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:40:0,114,1673:0,119,255:40,0 chr1 156396590 . C . PASS END=156396664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,149,255:40,0 chr1 156399168 . C . PASS END=156399173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,817:0,66,255:23,0 chr1 156399174 . T . PASS END=156399177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156399178 . T . PASS END=156399180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 156399181 . G . PASS END=156399182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156399183 . A . PASS END=156399183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 156399184 . G . PASS END=156399208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,987:0,84,255:32,0 chr1 156399209 . C . PASS END=156399209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 156399210 . G . PASS END=156399292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1243:0,98,255:39,0 chr1 156399293 . A . PASS END=156399293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1241:0,64,255:28,0 chr1 156399294 . T . PASS END=156399301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1193:0,86,255:30,0 chr1 156399302 . T . PASS END=156399340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,801:0,61,255:26,0 chr1 156399822 . T . PASS END=156399823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:25,0 chr1 156399824 . G . PASS END=156399911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:29:0,87,1057:0,87,255:40,0 chr1 156403961 . C . PASS END=156403968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1174:0,96,255:33,0 chr1 156403969 . T . PASS END=156403969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:31,0 chr1 156403970 . T . PASS END=156403992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1213:0,86,255:36,0 chr1 156403993 . T . PASS END=156403993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1283:0,73,255:37,0 chr1 156403994 . G . PASS END=156404009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,109,1316:0,109,255:40,0 chr1 156404010 . A . PASS END=156404010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:62:44:0,62,1430:0,62,255:40,0 chr1 156404011 . T . PASS END=156404102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,99,1390:0,105,255:40,0 chr1 156426145 . T . PASS END=156426163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,113,1518:0,113,255:40,0 chr1 156437437 . T . PASS END=156437448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 156437785 . C . PASS END=156437791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 156437792 . T . PASS END=156437811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 156437812 . A . PASS END=156437812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,706:0,19,255:19,0 chr1 156437813 . G . PASS END=156437815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 156437816 . G . PASS END=156437816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 156437817 . A . PASS END=156437840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,829:0,66,255:26,0 chr1 156437841 . C . PASS END=156437841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 156437842 . T . PASS END=156437847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156437848 . C . PASS END=156437850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156437851 . C . PASS END=156437852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 156437853 . G . PASS END=156437854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156437855 . C . PASS END=156437855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 156437856 . C . PASS END=156437860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156437861 . G . PASS END=156437862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1016:0,71,255:28,0 chr1 156437863 . G . PASS END=156437864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156437865 . G . PASS END=156437866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 156437867 . C . PASS END=156437870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156437871 . A . PASS END=156437871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 156437872 . G . PASS END=156437877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156437878 . C . PASS END=156437922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 156437923 . G . PASS END=156437926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr1 156437927 . C . PASS END=156437939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:21,0 chr1 156437940 . C . PASS END=156437979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,668:0,41,255:19,0 chr1 156437980 . A . PASS END=156438012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,358:0,33,255:13,0 chr1 156438013 . C . PASS END=156438047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 156438048 . T . PASS END=156438050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 156438051 . C . PASS END=156438064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:7,0 chr1 156438065 . C . PASS END=156438076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:6,0 chr1 156438077 . A . PASS END=156438077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 156438078 . G . PASS END=156438090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 156438091 . G . PASS END=156438091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 156438572 . A . PASS END=156438582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,706:0,51,255:19,0 chr1 156438583 . G . PASS END=156438583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 156438584 . A . PASS END=156438584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156438585 . G . PASS END=156438589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,789:0,63,255:24,0 chr1 156438590 . A . PASS END=156438590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:24,0 chr1 156438591 . C . PASS END=156438599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,961:0,75,255:26,0 chr1 156438600 . G . PASS END=156438607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 156438608 . T . PASS END=156438609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156438610 . T . PASS END=156438666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1215:0,83,255:37,0 chr1 156438667 . C . PASS END=156438667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:30,0 chr1 156438668 . G . PASS END=156438683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:31,0 chr1 156438684 . G . PASS END=156438738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:26,0 chr1 156438739 . A . PASS END=156438742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 156438743 . C . PASS END=156438746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156438747 . G . PASS END=156438753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 156438754 . C . PASS END=156438760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 156438761 . G . PASS END=156438778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:18,0 chr1 156438779 . A . PASS END=156438779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 156438780 . A . PASS END=156438786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156438787 . G . PASS END=156438787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 156438788 . A . PASS END=156438802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr1 156438803 . A . PASS END=156438808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 156438809 . T . PASS END=156438812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 156444900 . C . PASS END=156444903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 156444904 . G . PASS END=156444924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1089:0,82,255:34,0 chr1 156444925 . A . PASS END=156444925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:33,0 chr1 156444926 . G . PASS END=156445005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:35,0 chr1 156445006 . G . PASS END=156445023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,62,255:26,0 chr1 156445024 . A . PASS END=156445029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 156446286 . C . PASS END=156446306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,111,1720:0,111,255:40,0 chr1 156446804 . C . PASS END=156446806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 156446807 . G . PASS END=156446807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 156446808 . T . PASS END=156446811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 156446812 . G . PASS END=156446812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 156446813 . C . PASS END=156446815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 156446816 . T . PASS END=156446816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:20,0 chr1 156446817 . A . PASS END=156446817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 156446818 . A . PASS END=156446822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,833:0,69,255:24,0 chr1 156446823 . T . PASS END=156446824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr1 156446825 . T . PASS END=156446827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 156446828 . T . PASS END=156446828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 156446829 . G . PASS END=156446837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 156446838 . G . PASS END=156446838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 156446839 . T . PASS END=156446841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156446842 . T . PASS END=156446842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,725:0,38,255:20,0 chr1 156446843 . G . PASS END=156446844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 156446845 . C . PASS END=156446847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156446848 . G . PASS END=156446848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:18,0 chr1 156446849 . C . PASS END=156446854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 156446855 . G . PASS END=156446855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 156446856 . G . PASS END=156446862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 156446863 . G . PASS END=156446863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 156446864 . G . PASS END=156446865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156446866 . T . PASS END=156446866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 156446867 . G . PASS END=156446870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156446871 . G . PASS END=156446871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 156446872 . C . PASS END=156446873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 156446874 . C . PASS END=156446874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 156446875 . C . PASS END=156446881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 156446882 . G . PASS END=156446882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr1 156446883 . G . PASS END=156446883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156446884 . T . PASS END=156446884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 156446885 . G . PASS END=156446885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156446886 . C . PASS END=156446887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:18,0 chr1 156446888 . G . PASS END=156446888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156446889 . T . PASS END=156446889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 156446890 . G . PASS END=156446892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 156446893 . T . PASS END=156446893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 156446894 . A . PASS END=156446894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156446895 . G . PASS END=156446895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 156446896 . G . PASS END=156446902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 156446903 . T C, 43.90 PASS DP=24;MQ=250.00;MQRankSum=3.889;ReadPosRankSum=2.419;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,8,0:0.333,0.000:24:7,2,0:9,6,0:43:79,0,50,257,543,801:224,0,255:14,0:4.3903e+01,1.9855e-04,5.3000e+01,2.5735e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,2,6:6,10,4,4 chr1 156446904 . G . PASS END=156446921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 156446922 . A . PASS END=156446922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 156446923 . C . PASS END=156446932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:23,0 chr1 156446933 . G . PASS END=156446933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 156446934 . C . PASS END=156446940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 156446941 . C . PASS END=156446944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156446945 . G . PASS END=156446958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:19,0 chr1 156446959 . G . PASS END=156446961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr1 156446962 . C . PASS END=156446968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr1 156446969 . A . PASS END=156446976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 156446977 . C . PASS END=156446994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:20:7:0,20,271:0,20,255:9,0 chr1 156449082 . C . PASS END=156449086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 156449087 . G . PASS END=156449087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 156449088 . G . PASS END=156449088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 156449089 . G . PASS END=156449108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr1 156449109 . C . PASS END=156449111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 156449112 . T . PASS END=156449138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1217:0,86,255:34,0 chr1 156449378 . C . PASS END=156449379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156449380 . G . PASS END=156449380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 156449381 . C . PASS END=156449386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156449387 . C . PASS END=156449399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 156449400 . C . PASS END=156449400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156449401 . A . PASS END=156449401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156449402 . G . PASS END=156449402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 156449403 . G . PASS END=156449425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,576:0,44,255:21,0 chr1 156449426 . G . PASS END=156449435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 156449436 . C . PASS END=156449437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156449438 . G . PASS END=156449452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:25,0 chr1 156449453 . G . PASS END=156449453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 156449454 . C . PASS END=156449460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 156449461 . T . PASS END=156449461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 156449462 . C . PASS END=156449491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr1 156449492 . T . PASS END=156449492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 156449493 . G . PASS END=156449507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:20,0 chr1 156449508 . G . PASS END=156449536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,623:0,43,255:19,0 chr1 156449537 . T . PASS END=156449537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:14,0 chr1 156449538 . G . PASS END=156449547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 156449548 . A . PASS END=156449550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 156449551 . G . PASS END=156449553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 156449554 . A . PASS END=156449565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:15:0,33,495:0,45,255:13,0 chr1 156449566 . A . PASS END=156449566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:10,0 chr1 156449567 . A . PASS END=156449588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:12,0 chr1 156450435 . G . PASS END=156450540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:92:40:0,92,1401:0,92,255:40,0 chr1 156450541 . T . PASS END=156450541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,5:55:68:55:0,68,1682:0,68,255:40,0 chr1 156450542 . C . PASS END=156450549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,102,1713:0,102,255:40,0 chr1 156450550 . C . PASS END=156450550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:70:51:0,70,1543:0,70,255:39,0 chr1 156450551 . T . PASS END=156450555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:50:0,94,1595:0,94,255:40,0 chr1 156450556 . T . PASS END=156450556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:70:51:0,70,1582:0,70,255:40,0 chr1 156450557 . T . PASS END=156450559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:94:50:0,94,1506:0,94,255:40,0 chr1 156450560 . T . PASS END=156450560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:67:50:0,67,1401:0,67,255:34,0 chr1 156450561 . G . PASS END=156450561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,117,1755:0,150,255:39,0 chr1 156450562 . T . PASS END=156450562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:21:45:0,21,1158:0,21,255:34,0 chr1 156450563 . G . PASS END=156450569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:80:45:0,80,1491:0,80,255:39,0 chr1 156450626 . C . PASS END=156450702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:34:0,80,1189:0,80,255:36,0 chr1 156450703 . G . PASS END=156450707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1316:0,92,255:33,0 chr1 156450708 . T . PASS END=156450708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr1 156450709 . C . PASS END=156450739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1233:0,86,255:33,0 chr1 156450740 . G A, 49.01 PASS DP=32;MQ=246.11;MQRankSum=4.767;ReadPosRankSum=2.032;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:9,8,0:9,6,0:48:84,0,50,500,615,1116:255,0,255:15,0:4.9007e+01,7.6364e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,1,13:8,10,7,7 chr1 156450741 . T . PASS END=156450741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 156450742 . T . PASS END=156450742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:28,0 chr1 156450743 . G . PASS END=156450751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:30,0 chr1 156450752 . C . PASS END=156450752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:25,0 chr1 156450753 . T . PASS END=156450753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr1 156450754 . T . PASS END=156450763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:29:0,60,900:0,77,255:26,0 chr1 156452229 . C . PASS END=156452366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:34:0,81,1238:0,81,255:40,0 chr1 156452367 . G . PASS END=156452372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:34:0,69,1035:0,102,255:26,0 chr1 156452373 . T . PASS END=156452375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 156452376 . C . PASS END=156452377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 156452378 . C . PASS END=156452381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156452382 . C . PASS END=156452395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:24,0 chr1 156452396 . T . PASS END=156452396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 156452397 . C . PASS END=156452406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 156452407 . C . PASS END=156452407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156452408 . C . PASS END=156452412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156452413 . T . PASS END=156452413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 156452414 . T . PASS END=156452422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 156452423 . T . PASS END=156452432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 156453031 . C . PASS END=156453041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1282:0,94,255:37,0 chr1 156453042 . G . PASS END=156453042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:35,1 chr1 156453043 . C . PASS END=156453043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:39:0,82,1356:0,82,255:37,1 chr1 156453044 . T . PASS END=156453044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1314:0,68,255:36,0 chr1 156453045 . C . PASS END=156453084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:36:0,89,1203:0,89,255:39,0 chr1 156496278 . T . PASS END=156496391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,145,255:40,0 chr1 156497744 . C . PASS END=156497852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:37:0,87,1418:0,87,255:40,0 chr1 156498301 . T . PASS END=156498402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:33:0,85,1337:0,85,255:40,0 chr1 156498708 . T . PASS END=156498710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 156498711 . G . PASS END=156498721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 156498722 . C . PASS END=156498723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 156498724 . G . PASS END=156498725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 156498726 . T . PASS END=156498752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 156498753 . C . PASS END=156498874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr1 156499897 . C . PASS END=156499903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr1 156499904 . A . PASS END=156499904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 156499905 . G . PASS END=156499910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 156499911 . C . PASS END=156499911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 156499912 . C . PASS END=156499925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 156499926 . A . PASS END=156499926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 156499927 . G . PASS END=156499931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 156499932 . T . PASS END=156499933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 156499934 . C . PASS END=156499934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 156499935 . T . PASS END=156499959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,870:0,64,255:26,0 chr1 156499960 . A . PASS END=156499960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:23,0 chr1 156499961 . A . PASS END=156499968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,945:0,62,255:24,0 chr1 156499969 . T C, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,13,0:0,12,0:72:160,75,0,932,75,932:255,75,0:0,0:1.2178e+02,7.1779e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,10:0,0,13,12 chr1 156499970 . A . PASS END=156499993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:23,0 chr1 156499994 . T . PASS END=156499997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr1 156499998 . C . PASS END=156500001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156500002 . C . PASS END=156500004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156500005 . T . PASS END=156500005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156500006 . G . PASS END=156500006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156500007 . G . PASS END=156500009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156500010 . G . PASS END=156500028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,61,255:23,0 chr1 156500029 . T . PASS END=156500029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:17,0 chr1 156500030 . G . PASS END=156500031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 156500032 . G . PASS END=156500049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:20:0,47,735:0,47,255:19,0 chr1 156500050 . C . PASS END=156500057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156500058 . T . PASS END=156500090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,690:0,54,255:19,0 chr1 156500091 . G . PASS END=156500109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 156500952 . T . PASS END=156500957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1174:0,88,255:35,0 chr1 156500958 . T . PASS END=156500958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:34,0 chr1 156500959 . C . PASS END=156501027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1149:0,81,255:37,0 chr1 156501028 . A . PASS END=156501028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:27,0 chr1 156501029 . G . PASS END=156501034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156501035 . T . PASS END=156501039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 156502772 . C . PASS END=156502783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1435:0,104,255:40,0 chr1 156502784 . C . PASS END=156502820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:43:0,116,1800:0,116,255:40,0 chr1 156502821 . C T, 49.93 PASS DP=57;MQ=250.00;MQRankSum=6.411;ReadPosRankSum=5.575;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,27,0:0.482,0.000:56:17,16,0:12,11,0:47:85,0,47,185,185,185:255,0,255:29,0:4.9929e+01,8.7495e-05,5.0000e+01,1.8470e+02,2.1947e+02,1.8771e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,17,10,17:16,13,11,16 chr1 156502822 . T . PASS END=156502858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:55:0,120,1800:0,138,255:40,0 chr1 156502859 . T . PASS END=156502898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,99,1485:0,116,255:40,0 chr1 156503565 . C . PASS END=156503578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,878:0,69,255:24,0 chr1 156503579 . A . PASS END=156503584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:26,0 chr1 156503585 . G . PASS END=156503585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 156503586 . G . PASS END=156503586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 156503587 . C . PASS END=156503603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,995:0,81,255:31,0 chr1 156503604 . C . PASS END=156503604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 156503605 . C . PASS END=156503656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1180:0,90,255:32,0 chr1 156503657 . T . PASS END=156503667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1008:0,71,255:26,0 chr1 156503801 . C . PASS END=156503809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:33:0,95,1235:0,95,255:37,0 chr1 156503810 . G . PASS END=156503810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 156503811 . T . PASS END=156503933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,107,1322:0,107,255:40,0 chr1 156504293 . C . PASS END=156504333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,592:0,40,255:19,0 chr1 156504334 . C . PASS END=156504348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 156504349 . C . PASS END=156504356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr1 156504357 . A . PASS END=156504357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:17,0 chr1 156504358 . G . PASS END=156504362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:49:18:0,49,645:0,49,255:18,0 chr1 156504363 . C . PASS END=156504363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 156504364 . C . PASS END=156504364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,582:0,23,255:17,0 chr1 156504365 . T . PASS END=156504368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 156504369 . C . PASS END=156504369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 156504370 . A . PASS END=156504375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,654:0,41,255:19,0 chr1 156504376 . A . PASS END=156504376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 156504377 . G . PASS END=156504382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,737:0,47,255:18,0 chr1 156504383 . T . PASS END=156504384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156504385 . T . PASS END=156504387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156504388 . G . PASS END=156504391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156504392 . T . PASS END=156504392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 156504393 . G . PASS END=156504395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156504396 . C . PASS END=156504396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 156504397 . C . PASS END=156504399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 156504400 . A . PASS END=156504402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 156504403 . C . PASS END=156504404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 156504405 . C . PASS END=156504405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr1 156504406 . C . PASS END=156504407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156504408 . G . PASS END=156504418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:24,0 chr1 156504419 . T . PASS END=156504419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:23,0 chr1 156504420 . G . PASS END=156504427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,947:0,64,255:26,0 chr1 156504428 . G . PASS END=156504428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 156504429 . C . PASS END=156504429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 156504430 . C . PASS END=156504447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr1 156504448 . C . PASS END=156504449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 156504450 . T . PASS END=156504461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 156504462 . C . PASS END=156504462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 156504463 . G . PASS END=156504470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 156504471 . C . PASS END=156504471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 156504472 . A . PASS END=156504473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156504474 . G . PASS END=156504474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 156504475 . A . PASS END=156504476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156504477 . C . PASS END=156504477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 156504478 . C . PASS END=156504497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr1 156504498 . A . PASS END=156504518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:25,0 chr1 156504519 . C . PASS END=156504525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,60,255:19,0 chr1 156504955 . C . PASS END=156505023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,113,1693:0,113,255:40,0 chr1 156505024 . A . PASS END=156505039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,111,1665:0,117,255:40,0 chr1 156506967 . A . PASS END=156506967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156506973 . G . PASS END=156506981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr1 156506982 . T . PASS END=156506982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 156506983 . C . PASS END=156507089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:33:0,85,1196:0,85,255:40,0 chr1 156507090 . G . PASS END=156507090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr1 156507091 . G . PASS END=156507103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 156507104 . T . PASS END=156507113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:24,0 chr1 156508601 . C . PASS END=156508612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:26,0 chr1 156508613 . G . PASS END=156508613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 156508614 . T . PASS END=156508825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:30:0,90,1147:0,90,255:40,0 chr1 156509166 . T . PASS END=156509180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 156509181 . A . PASS END=156509181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156509182 . G . PASS END=156509329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1163:0,87,255:40,0 chr1 156509630 . C . PASS END=156509782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1215:0,87,255:40,0 chr1 156510500 . C . PASS END=156510509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1096:0,90,255:30,0 chr1 156510510 . A . PASS END=156510510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 156510511 . T . PASS END=156510516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 156510517 . T . PASS END=156510517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:30,0 chr1 156510518 . C . PASS END=156510690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,81,255:40,0 chr1 156510691 . G . PASS END=156510691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:26,0 chr1 156510692 . A . PASS END=156510695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:27,0 chr1 156510696 . T . PASS END=156510696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:25,0 chr1 156510697 . G . PASS END=156510698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156510699 . G . PASS END=156510708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,68,255:25,0 chr1 156513773 . C . PASS END=156513842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,109,1546:0,109,255:40,0 chr1 156513944 . A . PASS END=156514015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,113,1596:0,113,255:40,0 chr1 156514181 . C . PASS END=156514264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:53:0,117,1755:0,143,255:40,0 chr1 156517865 . C . PASS END=156517868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 156517869 . A . PASS END=156517869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 156517870 . T . PASS END=156517898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr1 156517899 . A . PASS END=156517899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 156517900 . G . PASS END=156517902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,929:0,62,255:24,0 chr1 156517903 . A . PASS END=156517903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 156517904 . G . PASS END=156517906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 156517907 . G . PASS END=156517907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156517908 . G . PASS END=156517914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156517915 . C . PASS END=156517923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 156517924 . T . PASS END=156517924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 156517925 . C . PASS END=156517931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr1 156517932 . A . PASS END=156517932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 156517933 . C . PASS END=156517944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr1 156517945 . G . PASS END=156517945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr1 156517946 . G . PASS END=156517959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156517960 . G . PASS END=156517981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr1 156517982 . G . PASS END=156517985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156517986 . T . PASS END=156517992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156517993 . G . PASS END=156517993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 156517994 . C . PASS END=156517994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 156517995 . T . PASS END=156518005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 156518006 . A . PASS END=156518007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156518008 . A . PASS END=156518008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156518009 . G . PASS END=156518013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 156518014 . C . PASS END=156518014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156518015 . A . PASS END=156518019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,782:0,50,255:19,0 chr1 156518020 . C . PASS END=156518032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156518033 . T . PASS END=156518035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156518140 . C . PASS END=156518142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156518143 . G . PASS END=156518143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 156518144 . A . PASS END=156518144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156518145 . T . PASS END=156518158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,881:0,67,255:26,0 chr1 156518159 . A . PASS END=156518159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 156518160 . G . PASS END=156518160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156518161 . G . PASS END=156518240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1149:0,87,255:38,0 chr1 156518241 . C . PASS END=156518241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1033:0,55,255:32,0 chr1 156518242 . A . PASS END=156518267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:33,0 chr1 156518268 . A . PASS END=156518279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,84,255:26,0 chr1 156518373 . C . PASS END=156518378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 156518379 . G A, 139.38 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:89:177,92,0,1135,92,1135:255,93,0:0,0:1.3938e+02,8.9376e+01,0.0000e+00,4.5000e+02,1.2415e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,14:0,0,13,18 chr1 156518380 . C . PASS END=156518382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156518383 . T . PASS END=156518383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 156518384 . T . PASS END=156518416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,947:0,92,255:38,0 chr1 156518417 . T . PASS END=156518442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,105,1390:0,110,255:40,0 chr1 156518443 . C . PASS END=156518443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr1 156518444 . C . PASS END=156518452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:35,0 chr1 156518453 . G . PASS END=156518453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1255:0,61,255:32,0 chr1 156518454 . C . PASS END=156518466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1305:0,96,255:34,0 chr1 156518467 . C . PASS END=156518467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:15:32:0,15,908:0,15,255:26,0 chr1 156518468 . C . PASS END=156518470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 156518471 . A . PASS END=156518471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 156518472 . A . PASS END=156518483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 156518484 . T . PASS END=156518499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr1 156518500 . C . PASS END=156518500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 156518501 . T . PASS END=156518501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr1 156518502 . C . PASS END=156518510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156518511 . C . PASS END=156518519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 156518520 . T . PASS END=156518520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:17,0 chr1 156518521 . G . PASS END=156518538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,613:0,51,255:18,0 chr1 156518539 . C . PASS END=156518540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 156520053 . T . PASS END=156520059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,621:0,40,255:18,0 chr1 156520060 . A . PASS END=156520060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,558:0,24,255:17,0 chr1 156520061 . G . PASS END=156520061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 156520062 . C . PASS END=156520126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,870:0,61,255:25,0 chr1 156520127 . C . PASS END=156520127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 156520128 . C . PASS END=156520132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 156520133 . T . PASS END=156520135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,845:0,56,255:19,0 chr1 156520136 . C . PASS END=156520141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 156520142 . A . PASS END=156520142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156520143 . C . PASS END=156520143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156521497 . C . PASS END=156521660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:36:0,90,1305:0,90,255:40,0 chr1 156521766 . G . PASS END=156521887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:90:36:0,90,1308:0,92,255:40,0 chr1 156524027 . C . PASS END=156524032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 156524033 . G . PASS END=156524033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 156524034 . C . PASS END=156524036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156524037 . T . PASS END=156524037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:19,0 chr1 156524038 . T . PASS END=156524041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 156524042 . C . PASS END=156524042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 156524043 . C . PASS END=156524043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 156524044 . T . PASS END=156524045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,639:0,29,255:19,0 chr1 156524046 . C . PASS END=156524051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156524052 . C . PASS END=156524052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 156524053 . A . PASS END=156524054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 156524055 . C . PASS END=156524055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 156524056 . C . PASS END=156524061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156524062 . T . PASS END=156524062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,635:0,13,255:18,0 chr1 156524063 . G . PASS END=156524064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 156524065 . G . PASS END=156524065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 156524066 . G . PASS END=156524080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 156524081 . C . PASS END=156524081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 156524082 . T . PASS END=156524088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 156524089 . G . PASS END=156524089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 156524090 . A . PASS END=156524101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr1 156524102 . T . PASS END=156524102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 156524103 . C . PASS END=156524104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 156524105 . C . PASS END=156524109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,774:0,50,255:19,0 chr1 156524110 . C . PASS END=156524112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156524113 . C . PASS END=156524114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156524115 . G . PASS END=156524115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156524116 . G . PASS END=156524116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 156524117 . G . PASS END=156524122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 156524123 . T . PASS END=156524156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,651:0,41,255:19,0 chr1 156524157 . C . PASS END=156524157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:15,0 chr1 156524158 . C . PASS END=156524166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 156524167 . C . PASS END=156524167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 156524168 . T . PASS END=156524171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr1 156524172 . C . PASS END=156524172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 156524173 . C . PASS END=156524181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 156524182 . C . PASS END=156524183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 156524184 . C . PASS END=156524184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 156526325 . C . PASS END=156526325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 156526326 . C . PASS END=156526326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156526327 . C . PASS END=156526328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 156526329 . T . PASS END=156526330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 156526331 . C . PASS END=156526331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,643:0,5,255:18,0 chr1 156526332 . T . PASS END=156526332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 156526333 . G . PASS END=156526333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 156526334 . C . PASS END=156526335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,680:0,44,255:19,0 chr1 156526336 . G . PASS END=156526360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,795:0,63,255:23,0 chr1 156526361 . G . PASS END=156526387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,980:0,80,255:32,0 chr1 156526388 . T . PASS END=156526388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:30,0 chr1 156526389 . G . PASS END=156526406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1249:0,99,255:34,0 chr1 156526407 . G . PASS END=156526431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1186:0,86,255:35,0 chr1 156526432 . C . PASS END=156526432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:32,0 chr1 156526433 . A . PASS END=156526443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1263:0,89,255:33,0 chr1 156526444 . T C, 148.86 PASS DP=34;MQ=249.54;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:99:187,102,0,1258,102,1258:255,102,0:0,0:1.4886e+02,9.8856e+01,0.0000e+00,4.5000e+02,1.3363e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,20:0,0,16,18 chr1 156526445 . C . PASS END=156526463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:33,0 chr1 156526464 . A . PASS END=156526472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1053:0,60,255:25,0 chr1 156526473 . A . PASS END=156526481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,59,255:18,0 chr1 156526482 . A . PASS END=156526485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:19:0,48,720:0,57,255:16,0 chr1 156530726 . T . PASS END=156530789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1144:0,88,255:40,0 chr1 156530790 . C . PASS END=156530790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:33,0 chr1 156530791 . A . PASS END=156530813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1235:0,91,255:35,0 chr1 156531630 . C . PASS END=156531652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,659:0,48,255:22,0 chr1 156531653 . A . PASS END=156531657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:24,0 chr1 156531658 . A . PASS END=156531658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 156531659 . G . PASS END=156531668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 156531669 . G . PASS END=156531669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156531670 . T . PASS END=156531670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 156531671 . A . PASS END=156531672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156531673 . C . PASS END=156531673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156531674 . A . PASS END=156531678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156531679 . G . PASS END=156531679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156531680 . C . PASS END=156531682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156531683 . A . PASS END=156531687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 156531688 . C . PASS END=156531698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:30,0 chr1 156531699 . T . PASS END=156531699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 156531700 . C . PASS END=156531700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156531701 . G . PASS END=156531701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 156531702 . C . PASS END=156531712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 156531713 . C . PASS END=156531717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:24,0 chr1 156531718 . T . PASS END=156531718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:21,0 chr1 156531719 . C . PASS END=156531731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,895:0,67,255:24,0 chr1 156531732 . G . PASS END=156531743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 156531744 . A . PASS END=156531744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 156531745 . G . PASS END=156531746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 156531747 . G . PASS END=156531747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 156531748 . C . PASS END=156531748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156531749 . T . PASS END=156531749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 156531750 . C . PASS END=156531750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156531751 . T . PASS END=156531751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:25,0 chr1 156531752 . G . PASS END=156531753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:25,0 chr1 156531754 . C . PASS END=156531761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1019:0,73,255:26,0 chr1 156531762 . G . PASS END=156531762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156531763 . G . PASS END=156531768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 156531769 . T . PASS END=156531771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156531772 . A . PASS END=156531773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:27,0 chr1 156531774 . A . PASS END=156531774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156531775 . A . PASS END=156531777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:27,0 chr1 156531778 . T . PASS END=156531778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr1 156531779 . C . PASS END=156531781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 156531782 . G . PASS END=156531782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 156531783 . A . PASS END=156531793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1000:0,68,255:25,0 chr1 156532230 . T . PASS END=156532249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,893:0,62,255:25,0 chr1 156532378 . C . PASS END=156532457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,170,255:40,0 chr1 156532926 . A . PASS END=156532939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 156532940 . T . PASS END=156532940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 156532941 . G . PASS END=156532952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,690:0,54,255:19,0 chr1 156532953 . C . PASS END=156532954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 156532955 . T . PASS END=156532955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 156532956 . C . PASS END=156532976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:24,0 chr1 156532977 . T C, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,9,0:0,15,0:69:157,72,0,931,72,931:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,11:0,0,12,12 chr1 156532978 . T . PASS END=156532984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 156532985 . C . PASS END=156532985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 156532986 . G . PASS END=156532996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 156532997 . G . PASS END=156533004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 156533005 . A . PASS END=156533007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,950:0,48,255:28,0 chr1 156533008 . T . PASS END=156533008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 156533009 . T . PASS END=156533009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,950:0,48,255:28,0 chr1 156533010 . C . PASS END=156533012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:32,0 chr1 156533013 . C . PASS END=156533013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 156533014 . A . PASS END=156533014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr1 156533015 . G . PASS END=156533019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1128:0,83,255:33,0 chr1 156533020 . G . PASS END=156533021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr1 156533022 . A . PASS END=156533023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1227:0,86,255:34,0 chr1 156533024 . T . PASS END=156533024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:32,0 chr1 156533025 . G . PASS END=156533038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:34,0 chr1 156533039 . C . PASS END=156533039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:56:35:0,56,1191:0,56,255:30,0 chr1 156533040 . A . PASS END=156533048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1156:0,83,255:32,0 chr1 156533049 . G . PASS END=156533050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:73:37:0,73,1278:0,73,255:29,0 chr1 156533051 . C . PASS END=156533057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:36:0,81,1260:0,81,255:32,0 chr1 156533058 . C . PASS END=156533058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr1 156533059 . A . PASS END=156533063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1155:0,80,255:30,0 chr1 156533064 . T . PASS END=156533064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:29,0 chr1 156533065 . C . PASS END=156533065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:30,0 chr1 156533066 . G . PASS END=156533066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:29,0 chr1 156533067 . C . PASS END=156533067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:31,0 chr1 156533068 . T . PASS END=156533068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr1 156533069 . C . PASS END=156533070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 156533071 . A . PASS END=156533071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 156533072 . C . PASS END=156533072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr1 156533073 . T . PASS END=156533073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,986:0,46,255:28,0 chr1 156533074 . G . PASS END=156533077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156533078 . C . PASS END=156533078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 156533079 . A . PASS END=156533086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 156533087 . C . PASS END=156533087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr1 156533088 . A . PASS END=156533088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 156533089 . A . PASS END=156533092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156533093 . C . PASS END=156533097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:25,0 chr1 156533098 . G . PASS END=156533098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:25,0 chr1 156533099 . C . PASS END=156533104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:25,0 chr1 156533345 . C . PASS END=156533458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:38:0,93,1347:0,93,255:40,0 chr1 156533549 . C . PASS END=156533616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,129,255:40,0 chr1 156534407 . C . PASS END=156534407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1482:0,117,255:39,0 chr1 156534408 . T . PASS END=156534408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr1 156534409 . G . PASS END=156534483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:39:0,89,1300:0,89,255:40,0 chr1 156535819 . C . PASS END=156535896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:35:0,92,1324:0,92,255:40,0 chr1 156536182 . C . PASS END=156536195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:24,0 chr1 156536196 . G . PASS END=156536218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr1 156536219 . A . PASS END=156536219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 156536220 . A . PASS END=156536220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156536221 . G C, 137.28 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,15,0:0,15,0:87:175,90,0,1131,90,1131:255,90,0:0,0:1.3728e+02,8.7280e+01,0.0000e+00,4.5000e+02,1.2205e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,18:0,0,15,15 chr1 156536222 . G . PASS END=156536250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:30:0,84,1247:0,89,255:35,0 chr1 156536251 . T C, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:102:190,105,0,1349,105,1349:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,14,21 chr1 156536252 . A . PASS END=156536288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1402:0,98,255:39,0 chr1 156536289 . C . PASS END=156536315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1233:0,86,255:33,0 chr1 156536316 . C . PASS END=156536325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 156536326 . G . PASS END=156536333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr1 156536334 . T . PASS END=156536334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:21,0 chr1 156536335 . C . PASS END=156536338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,71,255:21,0 chr1 156539168 . C . PASS END=156539191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:23,0 chr1 156539192 . A . PASS END=156539221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,884:0,69,255:26,0 chr1 156539222 . T . PASS END=156539222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 156539223 . G . PASS END=156539237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156539238 . C . PASS END=156539255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 156542270 . C . PASS END=156542307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,95,255:37,0 chr1 156542308 . G . PASS END=156542308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 156542309 . C . PASS END=156542309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:45:32:0,45,799:0,45,255:22,0 chr1 156542310 . T . PASS END=156542310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 156542311 . C . PASS END=156542311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1003:0,49,255:23,0 chr1 156542312 . T . PASS END=156542321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 156551157 . A . PASS END=156551164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 156551165 . C . PASS END=156551190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:15:0,43,535:0,43,255:19,0 chr1 156551191 . G . PASS END=156551193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156551194 . C . PASS END=156551204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156551205 . C . PASS END=156551217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156551218 . A . PASS END=156551242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,674:0,44,255:19,0 chr1 156551243 . G . PASS END=156551243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 156551244 . C . PASS END=156551263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,501:0,45,255:16,0 chr1 156551264 . C . PASS END=156551268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 156551269 . C . PASS END=156551269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156551270 . C . PASS END=156551272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 156551273 . C . PASS END=156551280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156551281 . C . PASS END=156551281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156551282 . T . PASS END=156551282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 156551283 . G . PASS END=156551305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,374:0,33,255:13,0 chr1 156551306 . C . PASS END=156551306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156551307 . C . PASS END=156551319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 156551320 . C . PASS END=156551323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 156551324 . G . PASS END=156551325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156551326 . A . PASS END=156551374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,629:0,41,255:19,0 chr1 156551375 . G . PASS END=156551402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 156551403 . T . PASS END=156551403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 156551404 . T . PASS END=156551429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 156551430 . A . PASS END=156551431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 156551432 . T . PASS END=156551443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 156551444 . C . PASS END=156551444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 156551445 . A . PASS END=156551446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156551447 . A . PASS END=156551447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 156551448 . G . PASS END=156551451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156551452 . T . PASS END=156551455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 156551456 . G . PASS END=156551456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:18,0 chr1 156551457 . C . PASS END=156551471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,714:0,57,255:19,0 chr1 156551472 . C . PASS END=156551472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:15,0 chr1 156551473 . A . PASS END=156551479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,729:0,47,255:19,0 chr1 156551480 . A . PASS END=156551484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 156551485 . A . PASS END=156551486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 156551487 . G . PASS END=156551488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156551489 . A . PASS END=156551530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:19,0 chr1 156551531 . G . PASS END=156551533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156551534 . C . PASS END=156551534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 156551535 . T . PASS END=156551535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156551536 . A . PASS END=156551565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:18,0 chr1 156551566 . T . PASS END=156551566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 156551567 . G . PASS END=156551599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 156551600 . G . PASS END=156551613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 156551614 . A . PASS END=156551614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156551615 . G . PASS END=156551664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:23,0 chr1 156551665 . C . PASS END=156551665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 156551666 . T . PASS END=156551666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156551667 . G . PASS END=156551667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 156551668 . A . PASS END=156551679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 156551680 . A . PASS END=156551680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156551681 . C . PASS END=156551688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 156551689 . A . PASS END=156551689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 156551690 . G . PASS END=156551690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156551691 . G . PASS END=156551691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 156551692 . A . PASS END=156551692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 156551693 . A . PASS END=156551693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156551694 . G . PASS END=156551717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:25,0 chr1 156551718 . A . PASS END=156551718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 156551719 . G . PASS END=156551719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 156551720 . A . PASS END=156551720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:22,0 chr1 156551721 . C . PASS END=156551721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 156551722 . A . PASS END=156551722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 156551723 . G . PASS END=156551732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 156551733 . G . PASS END=156551733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 156551734 . C . PASS END=156551734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156551735 . A . PASS END=156551735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,68,255:19,0 chr1 156551736 . G . LowGQ END=156551736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,5:24:0:24:0,0,557:11,0,255:16,0 chr1 156551737 . C . PASS END=156551739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 156551740 . T . PASS END=156551740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,585:0,22,255:16,0 chr1 156551741 . G . PASS END=156551741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156551742 . G . PASS END=156551742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 156551743 . C . PASS END=156551743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:19,0 chr1 156551744 . A . PASS END=156551744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,622:0,25,255:17,0 chr1 156551745 . C . PASS END=156551745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 156551746 . T . PASS END=156551746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,637:0,19,255:17,0 chr1 156551747 . G . PASS END=156551747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:20,0 chr1 156551748 . G . PASS END=156551748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156551749 . G . PASS END=156551750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156551751 . G . PASS END=156551751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156551752 . C . PASS END=156551752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr1 156551753 . T . PASS END=156551753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:19,0 chr1 156551754 . G . PASS END=156551754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 156551755 . C . PASS END=156551755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:19,0 chr1 156551756 . G . PASS END=156551756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156551757 . G . PASS END=156551757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 156551758 . C . PASS END=156551758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,694:0,35,255:18,0 chr1 156551759 . A . PASS END=156551759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,625:0,16,255:14,0 chr1 156551760 . G . PASS END=156551760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 156551761 . G . PASS END=156551761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:18,0 chr1 156551762 . A . PASS END=156551765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,786:0,52,255:19,0 chr1 156551766 . A . PASS END=156551767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:20,0 chr1 156551768 . G . PASS END=156551768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:21,0 chr1 156551769 . C . PASS END=156551769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 156551770 . T . PASS END=156551770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:21,0 chr1 156551771 . G . PASS END=156551771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 156551772 . A . PASS END=156551773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 156551774 . G . PASS END=156551775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,792:0,55,255:22,0 chr1 156551776 . G . PASS END=156551777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 156551778 . G . PASS END=156551778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 156551779 . G . PASS END=156551781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 156551782 . G . PASS END=156551783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,806:0,53,255:21,0 chr1 156551784 . C . PASS END=156551784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156551785 . A . PASS END=156551785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:21,0 chr1 156551786 . T . PASS END=156551786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 156551787 . C . PASS END=156551787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156551788 . G . PASS END=156551788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 156551789 . G . PASS END=156551789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156551790 . G . PASS END=156551791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr1 156551792 . G . PASS END=156551793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156551794 . G . PASS END=156551796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 156551797 . A . PASS END=156551797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:17,0 chr1 156551798 . A . PASS END=156551799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 156551800 . T . PASS END=156551800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:17,0 chr1 156551801 . T . PASS END=156551801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:17,0 chr1 156551802 . G . PASS END=156551802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:19,0 chr1 156551803 . T . PASS END=156551804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156551805 . C . PASS END=156551805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 156551806 . A . PASS END=156551806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156551807 . G . PASS END=156551807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 156551808 . G . PASS END=156551810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156551811 . C . PASS END=156551811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 156551812 . T . PASS END=156551820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,630:0,60,255:20,0 chr1 156551821 . G . PASS END=156551821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 156551822 . C . PASS END=156551825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156551826 . A . PASS END=156551826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 156551827 . G . PASS END=156551828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156551829 . C . PASS END=156551832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 156551833 . C . PASS END=156551833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 156551834 . C . PASS END=156551836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 156551837 . G . PASS END=156551837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr1 156551838 . A . PASS END=156551841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156551842 . G . PASS END=156551845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 156551846 . T . PASS END=156551846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:17,0 chr1 156551847 . G . PASS END=156551850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,731:0,49,255:19,0 chr1 156551851 . G . PASS END=156551853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156551854 . G . PASS END=156551862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 156552023 . G . PASS END=156552033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,862:0,61,255:25,0 chr1 156552034 . A . PASS END=156552035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,827:0,42,255:23,0 chr1 156552036 . C . PASS END=156552037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156552038 . A . PASS END=156552046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1024:0,87,255:30,0 chr1 156552047 . T . PASS END=156552047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 156552048 . G . PASS END=156552049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1133:0,93,255:31,0 chr1 156552050 . G . PASS END=156552050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 156552051 . C . PASS END=156552051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156552052 . T . PASS END=156552052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 156552053 . A . PASS END=156552066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1208:0,83,255:32,0 chr1 156552067 . C . PASS END=156552067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 156552068 . T . PASS END=156552079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:33,0 chr1 156552080 . C . PASS END=156552080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:31,0 chr1 156552081 . C . PASS END=156552119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1280:0,92,255:35,0 chr1 156552120 . G . PASS END=156552120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:32,0 chr1 156552121 . C . PASS END=156552142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1065:0,82,255:33,0 chr1 156552143 . T . PASS END=156552143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:30,0 chr1 156552144 . A . PASS END=156552153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:31,0 chr1 156552154 . G . PASS END=156552154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:27,0 chr1 156552155 . G . PASS END=156552155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156552156 . G . PASS END=156552213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,814:0,62,255:26,0 chr1 156552214 . G . PASS END=156552223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:16,0 chr1 156552224 . A . PASS END=156552226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:16:0,33,495:0,48,255:12,0 chr1 156552834 . G . PASS END=156552859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr1 156552860 . G . PASS END=156552860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156552861 . G . PASS END=156552861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 156552862 . C . PASS END=156552864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156552865 . G . PASS END=156552865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 156552866 . A . PASS END=156552868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 156552869 . T . PASS END=156552891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,631:0,43,255:19,0 chr1 156552892 . G . PASS END=156552892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156552893 . A . PASS END=156552899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,790:0,50,255:19,0 chr1 156552900 . T . PASS END=156552907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 156552908 . C . PASS END=156552908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 156552909 . A . PASS END=156552911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 156552912 . A . PASS END=156552913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 156552914 . G . PASS END=156552915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156552916 . T . PASS END=156552942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,653:0,43,255:19,0 chr1 156552943 . G . PASS END=156552943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:14,0 chr1 156552944 . C . PASS END=156552944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 156552945 . A . PASS END=156552945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr1 156552946 . G . PASS END=156552962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 156553114 . G . PASS END=156553148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1133:0,82,255:38,0 chr1 156553149 . G . PASS END=156553209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,92,255:39,0 chr1 156553210 . A . PASS END=156553210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 156553211 . A . PASS END=156553212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 156553213 . T . PASS END=156553223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:25,0 chr1 156553224 . A . PASS END=156553225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 156553226 . C . PASS END=156553226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156553227 . A . PASS END=156553242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 156553589 . A . PASS END=156553589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:29,0 chr1 156553590 . A . PASS END=156553590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 156553591 . G . PASS END=156553591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1116:0,49,255:30,0 chr1 156553592 . G . PASS END=156553592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr1 156553593 . A . PASS END=156553595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1157:0,82,255:32,0 chr1 156553596 . C . PASS END=156553596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr1 156553597 . A . PASS END=156553599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:31,0 chr1 156553600 . T . PASS END=156553601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1049:0,44,255:30,0 chr1 156553602 . C . PASS END=156553602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:32,0 chr1 156553603 . T . PASS END=156553605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:32,0 chr1 156553606 . G . PASS END=156553606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1136:0,53,255:31,0 chr1 156553607 . C . PASS END=156553607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1263:0,86,255:32,0 chr1 156553608 . G . PASS END=156553608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1182:0,71,255:32,0 chr1 156553609 . A . PASS END=156553615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1105:0,96,255:32,0 chr1 156553616 . C . PASS END=156553616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr1 156553617 . T . PASS END=156553624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1142:0,80,255:32,0 chr1 156553625 . A . PASS END=156553625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr1 156553626 . A . PASS END=156553631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1133:0,82,255:30,0 chr1 156553632 . C . PASS END=156553632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 156553633 . A . PASS END=156553633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:24,0 chr1 156553634 . G . PASS END=156553657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,922:0,62,255:26,0 chr1 156553658 . C . PASS END=156553658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 156553659 . A . PASS END=156553665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 156553666 . G . PASS END=156553687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:17,0 chr1 156554669 . A . PASS END=156554670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 156554671 . T . PASS END=156554672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 156554673 . C . PASS END=156554674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 156554675 . G . PASS END=156554675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 156554676 . C . PASS END=156554723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:31:0,86,1172:0,86,255:40,1 chr1 156554724 . C . PASS END=156554724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:75:42:0,75,1484:0,75,255:40,1 chr1 156554725 . C . PASS END=156554766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:36:0,88,1309:0,88,255:40,0 chr1 156554917 . A . PASS END=156555023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:37:0,96,1346:0,98,255:40,0 chr1 156555505 . T . PASS END=156555618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:37:0,89,1355:0,89,255:40,0 chr1 156555741 . G . PASS END=156555752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:31,0 chr1 156555753 . G . PASS END=156555753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 156555754 . G . PASS END=156555985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1260:0,90,255:40,0 chr1 156555986 . T . PASS END=156556007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1263:0,89,255:33,0 chr1 156556008 . T . PASS END=156556008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:31,0 chr1 156556009 . G . PASS END=156556022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,108,255:33,0 chr1 156556023 . C T, 49.51 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=2.931;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,16,0:0.457,0.000:35:8,9,0:11,7,0:48:84,0,50,572,643,1215:255,0,255:17,0:4.9509e+01,7.0410e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,4,12:8,11,7,9 chr1 156556024 . G . PASS END=156556060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1350:0,81,255:38,1 chr1 156556061 . G . PASS END=156556158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1166:0,83,255:40,0 chr1 156556261 . G . PASS END=156556283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,114,1568:0,116,255:40,0 chr1 156556284 . G . PASS END=156556320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,105,1653:0,105,255:40,0 chr1 156556321 . G A, 40.70 PASS DP=47;MQ=249.53;MQRankSum=4.861;ReadPosRankSum=3.087;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,16,0:0.340,0.000:47:19,8,0:12,8,0:40:75,0,50,512,1051,1563:255,0,255:29,0:4.0699e+01,3.9141e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,10,6:10,21,8,8 chr1 156556322 . G . PASS END=156556342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:40:0,96,1476:0,96,255:40,0 chr1 156561597 . A . PASS END=156561613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 156561614 . G . PASS END=156561616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 156561617 . G . PASS END=156561622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 156561623 . C T, 0.01 DRAGENSnpHardQUAL DP=10;MQ=244.98;MQRankSum=1.393;ReadPosRankSum=1.393;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:5,0,0:4,1,0:26:9,0,50,36,322,358:9,0,255:9,0:1.0683e-02,2.6097e+01,7.9097e+01,6.1868e+01,3.8276e+02,3.8676e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,0,1:3,6,1,0 chr1 156561624 . C . PASS END=156561645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 156561646 . C . LowGQ END=156561646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 156561647 . G . PASS END=156561650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 156561651 . G C, 84.73 PASS DP=13;MQ=246.07;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,7,0:0,6,0:35:123,38,0,223,223,223:255,39,0:0,0:8.4727e+01,3.4727e+01,1.4628e-03,2.1950e+02,2.5427e+02,2.2251e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,9,4:0,0,7,6 chr1 156561652 . T . PASS END=156561676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,433:0,36,255:12,0 chr1 156561677 . C . LowGQ END=156561677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 156561678 . G . PASS END=156561688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 156561689 . G . PASS END=156561739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 156561740 . C . PASS END=156561749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 156561750 . A . PASS END=156561771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 156561772 . A . PASS END=156561772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 156561773 . C . PASS END=156561778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 156561893 . C . PASS END=156561908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,931:0,62,255:26,0 chr1 156561909 . G . PASS END=156561909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156561910 . C . PASS END=156561954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,886:0,61,255:26,0 chr1 156561955 . A . PASS END=156561955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 156561956 . A . PASS END=156561958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr1 156561959 . T . PASS END=156561959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 156561960 . A . PASS END=156561967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156561968 . G . PASS END=156561970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 156561971 . C . PASS END=156561990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 156561991 . C . PASS END=156561993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156561994 . T . PASS END=156561998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 156561999 . A . PASS END=156562001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 156562157 . G . PASS END=156562164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 156562165 . C . PASS END=156562168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156562169 . A . PASS END=156562169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 156562170 . C . PASS END=156562172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156562173 . C . PASS END=156562180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,939:0,64,255:27,0 chr1 156562181 . A . PASS END=156562181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156562182 . G . PASS END=156562199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1094:0,87,255:38,0 chr1 156562200 . T . PASS END=156562200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr1 156562201 . G . PASS END=156562232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:38:0,89,1240:0,89,255:40,0 chr1 156562233 . A . PASS END=156562233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:58:46:0,58,1415:0,58,255:40,0 chr1 156562234 . T . PASS END=156562267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:43:0,81,1158:0,81,255:40,0 chr1 156562349 . G . PASS END=156562457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,108,1620:0,116,255:40,0 chr1 156562458 . C . PASS END=156562463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:69:40:0,69,1035:0,107,255:25,0 chr1 156563200 . C . PASS END=156563217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,668:0,43,255:19,0 chr1 156563218 . C . PASS END=156563224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr1 156563225 . A . PASS END=156563240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,994:0,80,255:32,0 chr1 156563241 . C . PASS END=156563241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 156563242 . A . PASS END=156563337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1135:0,80,255:38,0 chr1 156563338 . A . PASS END=156563369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,84,255:38,0 chr1 156563370 . G . PASS END=156563374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:38:0,72,1080:0,76,255:25,0 chr1 156563375 . G A, 154.90 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,19,0:0,17,0:105:193,108,0,1364,108,1364:255,111,0:0,0:1.5490e+02,1.0490e+02,0.0000e+00,4.5000e+02,1.3967e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,21:0,0,18,18 chr1 156563376 . G . PASS END=156563376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:25,0 chr1 156563377 . A . PASS END=156563377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1148:0,53,255:25,0 chr1 156563378 . G . PASS END=156563385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1125:0,63,255:26,0 chr1 156563386 . C . PASS END=156563386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:25,0 chr1 156563387 . C . PASS END=156563388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 156563389 . T . PASS END=156563389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:17:29:0,17,910:0,17,255:24,0 chr1 156563390 . A . PASS END=156563390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr1 156563391 . C . PASS END=156563392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 156563393 . C . PASS END=156563394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,962:0,45,255:24,0 chr1 156563395 . C . PASS END=156563396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 156563397 . T . PASS END=156563397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 156563398 . G . PASS END=156563398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 156563399 . A . PASS END=156563399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr1 156563400 . C . PASS END=156563400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 156563401 . T . PASS END=156563401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,809:0,26,255:21,0 chr1 156563402 . C . PASS END=156563403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:22,0 chr1 156563404 . T G, 49.64 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=2.375;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,11,0:0.458,0.000:24:6,5,0:7,6,0:48:84,0,50,393,465,858:255,0,255:9,0:4.9641e+01,6.8857e-05,5.3000e+01,3.9334e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,3,8:6,7,3,8 chr1 156563405 . G . PASS END=156563408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr1 156563409 . A . PASS END=156563409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156563410 . C . PASS END=156563412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:20,0 chr1 156563413 . C . PASS END=156563413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:18,0 chr1 156563414 . A . PASS END=156563414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:19,0 chr1 156563415 . G . PASS END=156563416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156563417 . T . PASS END=156563421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr1 156563674 . G . PASS END=156563688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,842:0,78,255:26,0 chr1 156563689 . A . PASS END=156563689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 156563690 . G . PASS END=156563698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:31,0 chr1 156563699 . T . PASS END=156563699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 156563700 . G . PASS END=156563725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1194:0,93,255:34,0 chr1 156563726 . A C, 154.88 PASS DP=36;MQ=219.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,18,0:0,18,0:105:193,108,0,293,293,293:255,108,0:0,0:1.5488e+02,1.0488e+02,0.0000e+00,2.8965e+02,3.2442e+02,2.9266e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,17:0,0,19,17 chr1 156563727 . T . PASS END=156563765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1248:0,92,255:39,0 chr1 156563766 . G . PASS END=156563773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,105,1575:0,117,255:40,0 chr1 156563774 . C . PASS END=156563812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,99,1553:0,99,255:40,0 chr1 156563813 . G A, 182.42 PASS DP=44;MQ=208.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,24,0:0,20,0:132:220,135,0,320,320,320:255,135,0:0,0:1.8242e+02,1.3242e+02,0.0000e+00,3.1719e+02,3.5196e+02,3.2020e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,21,23:0,0,17,27 chr1 156563814 . A . PASS END=156563851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:37:0,93,1395:0,94,255:40,0 chr1 156563852 . C T, 146.30 PASS DP=33;MQ=220.24;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,16,0:0,17,0:96:184,99,0,284,284,284:255,99,0:0,0:1.4630e+02,9.6302e+01,0.0000e+00,2.8107e+02,3.1584e+02,2.8408e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,19:0,0,13,20 chr1 156563853 . G . PASS END=156563861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:32,0 chr1 156563862 . T . PASS END=156563862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:29,0 chr1 156563863 . A . PASS END=156563870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1131:0,83,255:30,0 chr1 156563871 . C . PASS END=156563876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1055:0,74,255:26,0 chr1 156565005 . T . PASS END=156565007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:30:40:0,30,450:0,120,255:10,0 chr1 156565008 . C . PASS END=156565024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:21:41:0,21,315:0,107,255:9,0 chr1 156565025 . T . PASS END=156565031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:12:49:0,12,180:0,131,255:6,0 chr1 156565032 . C . LowGQ END=156565048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:51,0:51:0:50:0,0,0:0,145,255:2,0 chr1 156565049 . A AAC, 209.55 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,25,0:0,29,0:160:242,163,0,2430,163,2430:255,162,0:0,76:2.0955e+02,1.5955e+02,0.0000e+00,4.5000e+02,1.9432e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,20,34:0,0,33,21 chr1 156565050 . A . LowGQ END=156565050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,54:55:0:55:0,0,0:255,126,0:40,0 chr1 156565051 . G . PASS END=156565092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,151,255:40,0 chr1 156565093 . T . PASS END=156565177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:32:0,87,1305:0,96,255:40,0 chr1 156565178 . C . PASS END=156565178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:28,0 chr1 156565179 . C . PASS END=156565180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156565181 . T . PASS END=156565181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:29,0 chr1 156565182 . G . PASS END=156565193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr1 156565194 . T . PASS END=156565194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:28,0 chr1 156565195 . T . PASS END=156565207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1141:0,83,255:31,0 chr1 156565208 . C . PASS END=156565208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 156565209 . C . PASS END=156565209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:27,0 chr1 156565210 . A . PASS END=156565211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,82,255:26,0 chr1 156565212 . C . PASS END=156565224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1111:0,82,255:29,0 chr1 156565225 . T . PASS END=156565225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:26,0 chr1 156565226 . G . PASS END=156565250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1095:0,82,255:33,0 chr1 156565251 . T . PASS END=156565252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr1 156565253 . T . PASS END=156565255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1180:0,83,255:31,0 chr1 156565256 . T . PASS END=156565256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1097:0,50,255:30,0 chr1 156565257 . G . PASS END=156565264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1172:0,83,255:33,0 chr1 156565265 . G . PASS END=156565268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1151:0,63,255:32,0 chr1 156565269 . G . PASS END=156565318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1177:0,86,255:38,0 chr1 156565319 . C . PASS END=156565319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1034:0,50,255:33,0 chr1 156565320 . C . PASS END=156565320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1183:0,70,255:35,0 chr1 156565321 . T . PASS END=156565362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,109,1399:0,109,255:40,0 chr1 156565363 . A . PASS END=156565364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1191:0,73,255:37,0 chr1 156565365 . C . PASS END=156565371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,105,1575:0,123,255:39,0 chr1 156565372 . T . PASS END=156565372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1446:0,77,255:37,0 chr1 156565373 . C . PASS END=156565468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1260:0,88,255:40,0 chr1 156565469 . C . PASS END=156565469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1182:0,78,255:30,0 chr1 156565470 . T . PASS END=156565471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 156565472 . C . PASS END=156565472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1013:0,68,255:29,0 chr1 156565473 . T . PASS END=156565502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1150:0,80,255:31,0 chr1 156565503 . C . PASS END=156565504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:30,1 chr1 156565505 . T . PASS END=156565512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 156565513 . G . PASS END=156565514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:28,0 chr1 156565515 . G . PASS END=156565517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 156565518 . C . PASS END=156565531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:64:26:0,64,915:0,64,255:26,0 chr1 156565532 . G . PASS END=156565532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:23,0 chr1 156565533 . C . PASS END=156565540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 156565541 . G . PASS END=156565541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 156565542 . G . PASS END=156565547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 156565548 . A . PASS END=156565550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 156565551 . G . PASS END=156565554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:20,0 chr1 156565555 . T . PASS END=156565557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156565558 . C . PASS END=156565559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:22,0 chr1 156565560 . T . PASS END=156565560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,829:0,36,255:22,0 chr1 156565561 . T . PASS END=156565562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 156565563 . G . PASS END=156565594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,644:0,44,255:19,0 chr1 156565595 . C . PASS END=156565598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 156565599 . G . PASS END=156565631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:19,0 chr1 156565632 . A . PASS END=156565632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 156565633 . C . PASS END=156565641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 156565873 . T . PASS END=156565923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,102,1670:0,102,255:40,1 chr1 156566179 . A . PASS END=156566179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1496:0,110,255:40,0 chr1 156566180 . T . PASS END=156566180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1349:0,76,255:38,0 chr1 156566181 . C . PASS END=156566270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:40:0,82,1454:0,82,255:40,0 chr1 156566499 . C . PASS END=156566528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,861:0,62,255:26,0 chr1 156566529 . T . PASS END=156566553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,886:0,75,255:26,0 chr1 156566554 . G . PASS END=156566564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 156566565 . C . PASS END=156566578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr1 156566579 . T . PASS END=156566581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156566582 . A . PASS END=156566582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,949:0,76,255:27,0 chr1 156566583 . G . PASS END=156566585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1078:0,84,255:28,0 chr1 156566586 . G . PASS END=156566588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 156566589 . C . PASS END=156566637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1177:0,80,255:35,0 chr1 156566638 . G . PASS END=156566638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1279:0,64,255:34,0 chr1 156566639 . A . PASS END=156566699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1250:0,81,255:38,0 chr1 156566700 . T . PASS END=156566719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,908:0,61,255:27,0 chr1 156566720 . T . PASS END=156566738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:20:0,47,720:0,47,255:19,0 chr1 156567616 . T . PASS END=156567621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1050:0,90,255:30,0 chr1 156567622 . G . PASS END=156567633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,93,255:26,0 chr1 156567634 . C . PASS END=156567634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:57:32:0,57,855:0,96,255:19,0 chr1 156567635 . A . PASS END=156567635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:20,0 chr1 156567636 . C . PASS END=156567646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:20,0 chr1 156567647 . G . PASS END=156567667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:51:33:0,51,765:0,83,255:19,0 chr1 156567668 . T . PASS END=156567677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:33:35:0,33,495:0,82,255:13,0 chr1 156567678 . C CT, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.147;ReadPosRankSum=-0.099;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,26,0:0.650,0.000:40:8,11,0:6,15,0:44:79,0,42,877,419,1296:255,0,255:12,37:5.0000e+01,1.7939e-04,4.5040e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:6,8,17,9:8,6,10,16 chr1 156567679 . T . LowGQ END=156567679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:15,25:40:0:40:0,0,0:255,0,255:32,0 chr1 156567680 . A . PASS END=156567680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:96:40:0,96,1440:0,104,255:32,0 chr1 156567681 . A . PASS END=156567681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1276:0,72,255:30,0 chr1 156567682 . G . PASS END=156567709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1207:0,92,255:35,0 chr1 156567710 . T . PASS END=156567710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1202:0,53,255:33,0 chr1 156567711 . C . PASS END=156567714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1620:0,111,255:37,0 chr1 156567827 . C . PASS END=156567913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:95:46:0,95,1717:0,95,255:40,0 chr1 156568019 . C . PASS END=156568111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,109,1320:0,109,255:40,0 chr1 156568213 . C . PASS END=156568229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:43:0,99,1565:0,99,255:40,0 chr1 156568230 . T . PASS END=156568230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:39,0 chr1 156568231 . C . PASS END=156568286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:40:0,90,1385:0,90,255:40,0 chr1 156568760 . C . PASS END=156568838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:43:0,95,1568:0,95,255:40,0 chr1 156571201 . C . PASS END=156571228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,931:0,65,255:26,0 chr1 156571229 . C . PASS END=156571231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156593283 . A . PASS END=156593284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156593285 . G . PASS END=156593285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 156593286 . C . PASS END=156593298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr1 156593299 . C . PASS END=156593299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 156593300 . C . PASS END=156593303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:25,0 chr1 156593304 . C . PASS END=156593304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:22,0 chr1 156593305 . C . PASS END=156593305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156593306 . C . PASS END=156593306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:23,0 chr1 156593307 . A . PASS END=156593308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156593309 . A . PASS END=156593309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr1 156593310 . C . PASS END=156593317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 156593318 . C . PASS END=156593318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:29:26:0,29,842:0,29,255:23,0 chr1 156593319 . T . PASS END=156593319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 156593320 . T . PASS END=156593320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:25,0 chr1 156593321 . C . PASS END=156593323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 156593324 . T . PASS END=156593327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156593328 . T . PASS END=156593328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr1 156593329 . G . PASS END=156593362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,685:0,60,255:26,0 chr1 156593363 . C . PASS END=156593367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,666:0,44,255:19,0 chr1 156593599 . C . LowGQ END=156593600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 156593601 . T . PASS END=156593601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 156593602 . C . LowGQ END=156593607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:0,0,255:11,0 chr1 156593608 . C . PASS END=156593608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 156593609 . G . LowGQ END=156593609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 156593610 . G . PASS END=156593610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 156593611 . G . PASS END=156593611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 156593612 . C . PASS END=156593612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 156593613 . C . PASS END=156593613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 156593614 . C . PASS END=156593614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr1 156593615 . C . PASS END=156593615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 156593616 . C . PASS END=156593616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 156593617 . A . PASS END=156593617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 156593618 . C . PASS END=156593620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 156593621 . C . PASS END=156593621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 156593622 . C . PASS END=156593622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 156593623 . T . PASS END=156593624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 156593625 . C . PASS END=156593629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,657:0,41,255:19,0 chr1 156593630 . C . PASS END=156593630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 156593631 . C . PASS END=156593631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 156593632 . C . PASS END=156593632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 156593633 . C . PASS END=156593634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 156593635 . T . PASS END=156593637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 156593638 . A . PASS END=156593641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 156593642 . G . PASS END=156593642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156593643 . G . PASS END=156593650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,707:0,49,255:19,0 chr1 156593651 . C . PASS END=156593656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156593657 . T . PASS END=156593659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 156593660 . T . PASS END=156593660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 156593661 . G . PASS END=156593662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 156593663 . G . PASS END=156593663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 156593664 . G . PASS END=156593665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 156593666 . C . PASS END=156593668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 156593669 . G . PASS END=156593669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 156593670 . G . PASS END=156593673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156593674 . C . PASS END=156593677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 156593678 . G . PASS END=156593688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 156593689 . T . PASS END=156593689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,751:0,22,255:20,0 chr1 156593690 . G . PASS END=156593704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 156593705 . C . PASS END=156593730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:18:0,41,681:0,41,255:19,0 chr1 156593731 . T . PASS END=156593733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,44,255:13,0 chr1 156593734 . A . PASS END=156593749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,535:0,42,255:14,0 chr1 156593750 . G . PASS END=156593763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,31,255:13,0 chr1 156593764 . T . PASS END=156593765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 156593766 . A . PASS END=156593766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156593767 . T . PASS END=156593767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 156593768 . C . PASS END=156593771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156593772 . A . PASS END=156593772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 156593773 . A . PASS END=156593796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 156593797 . G . PASS END=156593797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 156593798 . G . PASS END=156593802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 156593803 . T . PASS END=156593803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 156593804 . G . PASS END=156593815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 156593816 . C . PASS END=156593818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 156593819 . G . PASS END=156593819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 156593820 . A . PASS END=156593822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 156593823 . C . PASS END=156593823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 156593824 . G . PASS END=156593828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 156593829 . G . PASS END=156593838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 156593839 . T . PASS END=156593841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156593842 . A . PASS END=156593875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr1 156593876 . G . PASS END=156593880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 156593881 . A . PASS END=156593885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 156593886 . C . PASS END=156593886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 156593887 . G . PASS END=156593912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 156593913 . A . PASS END=156593931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:14,0 chr1 156593932 . C . PASS END=156593932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr1 156593933 . G . PASS END=156593934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 156593935 . T . PASS END=156593948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 156593949 . G . PASS END=156593949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 156593950 . A . PASS END=156593952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:11,0 chr1 156594143 . G . PASS END=156594147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 156594148 . G . PASS END=156594148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 156594149 . T . PASS END=156594149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 156594150 . G . PASS END=156594155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 156594156 . G . PASS END=156594156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 156594157 . T . PASS END=156594168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,521:0,45,255:17,0 chr1 156594169 . C . PASS END=156594169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr1 156594170 . G . PASS END=156594176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,585:0,51,255:18,0 chr1 156594177 . G . PASS END=156594177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 156594178 . T . PASS END=156594243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,592:0,41,255:19,0 chr1 156594244 . T . PASS END=156594244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 156594245 . C . PASS END=156594259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:17,0 chr1 156594393 . C . PASS END=156594395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 156594396 . G . PASS END=156594396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 156594397 . G . PASS END=156594401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 156594402 . A . PASS END=156594403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 156594404 . G . PASS END=156594410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 156594411 . A . PASS END=156594412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 156594413 . T . PASS END=156594447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:26,0 chr1 156594448 . G . PASS END=156594448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156594449 . C . PASS END=156594452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:23,0 chr1 156594453 . A . PASS END=156594464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,86,255:31,0 chr1 156594465 . C . PASS END=156594465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1141:0,25,255:30,0 chr1 156594466 . C . PASS END=156594466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 156594467 . G . PASS END=156594470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:30,0 chr1 156594471 . G . PASS END=156594471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:28,0 chr1 156594472 . C . PASS END=156594473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:29,0 chr1 156594474 . C . PASS END=156594475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156594476 . C . PASS END=156594476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 156594477 . C . PASS END=156594477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156594478 . G . PASS END=156594480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 156594481 . C . PASS END=156594481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1069:0,38,255:28,0 chr1 156594482 . G . PASS END=156594482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr1 156594483 . G . PASS END=156594483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156594484 . C . PASS END=156594486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:27,0 chr1 156594487 . C . PASS END=156594487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 156594488 . C . PASS END=156594488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156594489 . G . PASS END=156594489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 156594490 . A . PASS END=156594490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156594491 . G . PASS END=156594497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 156594498 . C . PASS END=156594498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156594499 . C . PASS END=156594499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 156594500 . G . PASS END=156594500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156594501 . G . PASS END=156594502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 156594503 . A . PASS END=156594503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,856:0,31,255:26,0 chr1 156594504 . T . PASS END=156594504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr1 156594505 . C . PASS END=156594505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156594506 . C . PASS END=156594507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr1 156594508 . C . PASS END=156594508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 156594509 . A . PASS END=156594509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 156594510 . G . PASS END=156594513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr1 156594514 . C . PASS END=156594514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:14:36:0,14,1185:0,14,255:32,0 chr1 156594515 . G . PASS END=156594519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1241:0,66,255:33,0 chr1 156594520 . C . PASS END=156594521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 156594522 . G . PASS END=156594524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:33,0 chr1 156594525 . A . PASS END=156594525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1290:0,80,255:35,0 chr1 156594526 . C . PASS END=156594526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 156594527 . C . PASS END=156594527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 156594528 . G . PASS END=156594528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:37,0 chr1 156594529 . G . PASS END=156594591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:29:0,83,1100:0,83,255:37,0 chr1 156594592 . A . PASS END=156594603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,77,255:28,0 chr1 156594604 . G . PASS END=156594604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156594605 . G . PASS END=156594605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156594606 . G . PASS END=156594612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 156594613 . T . PASS END=156594633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 156594634 . G . PASS END=156594634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 156594635 . G . PASS END=156594650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:26,0 chr1 156594651 . G . PASS END=156594652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 156594893 . G . PASS END=156594895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 156594896 . A . PASS END=156594896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 156594897 . A . PASS END=156594905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:12,0 chr1 156594906 . C . PASS END=156594906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 156594907 . G . PASS END=156594907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 156594908 . T . PASS END=156594908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr1 156594909 . G . PASS END=156594910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 156594911 . C . PASS END=156594912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 156594913 . G . PASS END=156594924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 156594925 . C . PASS END=156594925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 156594926 . T . PASS END=156594926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 156594927 . G . PASS END=156594940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 156594941 . C . PASS END=156594941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 156594942 . G . PASS END=156594943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 156594944 . C . PASS END=156594945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 156594946 . T . PASS END=156594946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 156594947 . G . PASS END=156594957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 156594958 . G . PASS END=156594958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 156594959 . G . PASS END=156594959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 156594960 . C . PASS END=156594960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 156594961 . G . PASS END=156594965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:17,0 chr1 156594966 . G . PASS END=156594967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 156594968 . T . PASS END=156594968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 156594969 . G . PASS END=156594969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 156594970 . G . PASS END=156594983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,546:0,51,255:17,0 chr1 156594984 . C . PASS END=156594984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156594985 . C . PASS END=156594985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 156594986 . T . PASS END=156595024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr1 156595025 . A . PASS END=156595028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156595029 . C . PASS END=156595090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,930:0,72,255:26,0 chr1 156595091 . G . PASS END=156595091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 156595092 . G . PASS END=156595098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156595099 . G . PASS END=156595103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156595104 . C . PASS END=156595105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156595106 . G . PASS END=156595106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:18,0 chr1 156595107 . A . PASS END=156595135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr1 156595136 . A . PASS END=156595141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156595142 . C . PASS END=156595143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 156595144 . G . PASS END=156595145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:18:14:0,18,270:0,42,255:6,0 chr1 156595146 . C . PASS END=156595150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr1 156595151 . G . PASS END=156595157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:15:11:0,15,225:0,33,255:6,0 chr1 156595158 . C . PASS END=156595176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 156615175 . A . PASS END=156615175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,872:0,54,255:24,0 chr1 156615176 . T . PASS END=156615177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156615178 . T . PASS END=156615178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 156615179 . T . PASS END=156615179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,925:0,53,255:27,0 chr1 156615180 . G . PASS END=156615183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 156615184 . A . PASS END=156615184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:26,0 chr1 156615185 . G . PASS END=156615185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,865:0,67,255:27,0 chr1 156615186 . T . PASS END=156615189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1003:0,80,255:33,0 chr1 156615190 . G . PASS END=156615190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:36,0 chr1 156615191 . A . PASS END=156615193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:39:0,87,1269:0,87,255:39,0 chr1 156615194 . G A, 50.00 PASS DP=37;MQ=249.63;MQRankSum=5.166;ReadPosRankSum=3.398;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,20,0:0.541,0.000:37:8,8,0:9,12,0:48:85,0,50,628,599,1227:255,0,255:18,0:5.0000e+01,6.6786e-05,5.2678e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,10,10:10,7,12,8 chr1 156615195 . G . PASS END=156615210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1300:0,87,255:40,0 chr1 156615211 . A . PASS END=156615211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1329:0,54,255:39,0 chr1 156615212 . A . PASS END=156615231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:44:0,96,1438:0,96,255:40,0 chr1 156615232 . G . PASS END=156615301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:41:0,85,1395:0,85,255:40,0 chr1 156615839 . C . PASS END=156615913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:92:36:0,92,1294:0,92,255:38,0 chr1 156615914 . A . PASS END=156615914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:33,0 chr1 156615915 . T . PASS END=156615920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:35:0,94,1266:0,94,255:33,0 chr1 156615921 . G . PASS END=156615921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:30,0 chr1 156615922 . G . PASS END=156615937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1203:0,88,255:31,0 chr1 156616593 . A . PASS END=156616628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,304:0,24,255:9,0 chr1 156616629 . C . PASS END=156616632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 156616633 . A . PASS END=156616634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 156616635 . T . PASS END=156616635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 156616636 . G . PASS END=156616636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 156616637 . C . LowGQ END=156616637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 156616638 . A . PASS END=156616638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 156616639 . G . PASS END=156616641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 156616642 . C . PASS END=156616642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 156616643 . G . PASS END=156616643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 156616644 . T . PASS END=156616644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:12,0 chr1 156616645 . G . PASS END=156616646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 156616647 . T . PASS END=156616648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 156616649 . G . PASS END=156616651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 156616652 . G . PASS END=156616652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 156616653 . G . PASS END=156616656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 156616657 . C . PASS END=156616657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 156616658 . C . PASS END=156616658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156616659 . T . PASS END=156616663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 156616664 . A . PASS END=156616664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 156616665 . T . PASS END=156616666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 156616667 . C . PASS END=156616667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 156616668 . C . PASS END=156616678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr1 156616679 . C . PASS END=156616679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 156616680 . A . PASS END=156616680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:19,0 chr1 156616681 . C . PASS END=156616684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156616685 . C . PASS END=156616685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:20,0 chr1 156616686 . T . PASS END=156616687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 156616688 . C . PASS END=156616688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 156616689 . G . PASS END=156616705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 156616706 . C . PASS END=156616713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 156616714 . G . PASS END=156616716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156616717 . G . PASS END=156616717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 156616718 . G . PASS END=156616720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156616721 . T . PASS END=156616721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 156616722 . C . PASS END=156616734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 156616735 . G . PASS END=156616736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156616737 . G . PASS END=156616746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 156616747 . G . PASS END=156616747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 156616748 . T . PASS END=156616764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156616765 . A . PASS END=156616765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 156616766 . G . PASS END=156616766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 156616767 . A . PASS END=156616836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 156616837 . G . PASS END=156616837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 156616838 . T . PASS END=156616844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:16,0 chr1 156616845 . C . PASS END=156616845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 156616846 . G . PASS END=156616846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 156616847 . T . PASS END=156616847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 156616848 . C . PASS END=156616850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,601:0,51,255:18,0 chr1 156616851 . T . PASS END=156616851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 156616852 . C . PASS END=156616854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 156616855 . C . PASS END=156616855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 156616856 . G . PASS END=156616857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156616858 . C . PASS END=156616859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 156616860 . T . PASS END=156616877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:17,0 chr1 156616878 . A . PASS END=156616878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:16,0 chr1 156616879 . G . PASS END=156616890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,654:0,44,255:19,0 chr1 156616891 . C . PASS END=156616891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:19,0 chr1 156616892 . G . PASS END=156616895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156616896 . C . PASS END=156616897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,562:0,43,255:19,0 chr1 156616898 . G . PASS END=156616899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 156616900 . T . PASS END=156616900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 156616901 . A . PASS END=156616901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156616902 . T . PASS END=156616903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,646:0,24,255:19,0 chr1 156616904 . T . PASS END=156616904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156616905 . A . PASS END=156616913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,684:0,46,255:19,0 chr1 156616914 . A . LowGQ END=156616914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,484:4,0,255:15,0 chr1 156616915 . G . PASS END=156616916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 156616917 . T . PASS END=156616917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:17,0 chr1 156616918 . C . PASS END=156616921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:18,0 chr1 156616922 . C . PASS END=156616922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:16,0 chr1 156616923 . A . PASS END=156616933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,613:0,40,255:17,0 chr1 156616934 . G . PASS END=156616934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 156616935 . A . PASS END=156616937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:15,0 chr1 156616938 . G . PASS END=156616938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 156616939 . C . PASS END=156616941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 156616942 . C . PASS END=156616942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 156616943 . G . PASS END=156616944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156616945 . C . PASS END=156616945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:12,0 chr1 156616946 . G . PASS END=156616947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:32:16:0,32,565:0,32,255:16,0 chr1 156616948 . T . PASS END=156616951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 156616952 . G . PASS END=156616952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 156616953 . A . LowGQ END=156616953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,496:37,0,255:16,0 chr1 156616954 . G . PASS END=156616956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,645:0,41,255:18,0 chr1 156616957 . C . PASS END=156616957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:16,0 chr1 156616958 . A . PASS END=156616958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,615:0,40,255:17,0 chr1 156616959 . A . PASS END=156616959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,502:0,7,255:15,0 chr1 156616960 . G . PASS END=156616961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156616962 . T . PASS END=156616962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:19,0 chr1 156616963 . C . LowGQ END=156616963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,627:6,0,255:18,0 chr1 156616964 . A . PASS END=156616964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156616965 . A . PASS END=156616965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,595:0,49,255:19,0 chr1 156616966 . A . LowGQ END=156616966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,382:40,0,255:15,0 chr1 156616967 . G . PASS END=156616967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156617138 . G . PASS END=156617169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,142,255:40,0 chr1 156617300 . G . PASS END=156617300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:20,0 chr1 156617301 . G . PASS END=156617305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 156617306 . T . PASS END=156617306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 156617307 . C . PASS END=156617307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 156617308 . T . PASS END=156617308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,0 chr1 156617309 . T . PASS END=156617309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 156617310 . T . PASS END=156617310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,664:0,27,255:21,0 chr1 156617311 . C . PASS END=156617313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 156617314 . T . PASS END=156617314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 156617315 . A . PASS END=156617320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 156617321 . A . PASS END=156617321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:21,0 chr1 156617322 . G . PASS END=156617322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156617323 . G . PASS END=156617324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 156617325 . C . PASS END=156617328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:24,0 chr1 156617329 . G . PASS END=156617330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 156617331 . C . PASS END=156617344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,892:0,62,255:25,0 chr1 156617345 . C . PASS END=156617352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 156617353 . G . PASS END=156617364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 156617365 . G . PASS END=156617365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156617366 . C . PASS END=156617366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:26,0 chr1 156617367 . C . PASS END=156617387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,962:0,67,255:26,0 chr1 156617388 . C . PASS END=156617400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 156617401 . G . PASS END=156617418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr1 156617419 . T . PASS END=156617472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,593:0,48,255:18,0 chr1 156617473 . A . PASS END=156617474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:13,0 chr1 156617775 . G . PASS END=156617777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:32,0 chr1 156617778 . T . PASS END=156617778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1125:0,68,255:30,0 chr1 156617779 . C . PASS END=156617872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,93,255:40,0 chr1 156617873 . A . PASS END=156617891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,62,255:25,0 chr1 156617892 . A . PASS END=156617892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 156617893 . G . PASS END=156617901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 156617902 . G . PASS END=156617902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 156618360 . G . PASS END=156618368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:24,0 chr1 156618369 . T . PASS END=156618369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 156618370 . C . PASS END=156618371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156618372 . T . PASS END=156618372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 156618373 . G . PASS END=156618374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156618375 . G . PASS END=156618376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,853:0,56,255:23,0 chr1 156618377 . G . PASS END=156618388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr1 156618389 . A . PASS END=156618416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,899:0,81,255:29,0 chr1 156618417 . A . PASS END=156618420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156618421 . C . PASS END=156618425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156618426 . A . PASS END=156618426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 156618427 . G . PASS END=156618427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156618428 . C . PASS END=156618462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,931:0,65,255:26,0 chr1 156618463 . T . PASS END=156618463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 156618464 . G . PASS END=156618468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 156618469 . C . PASS END=156618524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,645:0,41,255:19,0 chr1 156618525 . G . PASS END=156618525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:16,0 chr1 156618526 . C . PASS END=156618527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 156618528 . A . PASS END=156618553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 156618554 . T . PASS END=156618554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 156618555 . G . PASS END=156618558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 156618559 . T . LowGQ END=156618561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:11,2 chr1 156618562 . G . PASS END=156618591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 156618592 . C . PASS END=156618592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156618593 . T . PASS END=156618593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156618594 . T . PASS END=156618628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 156618629 . C . PASS END=156618638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 156618639 . T . PASS END=156618639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 156618640 . C . PASS END=156618653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:11,0 chr1 156621248 . A . PASS END=156621270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,847:0,69,255:25,0 chr1 156621271 . C . PASS END=156621303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1149:0,80,255:33,0 chr1 156621304 . T . PASS END=156621304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:29,0 chr1 156621305 . C . PASS END=156621455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1141:0,80,255:40,0 chr1 156621456 . A . PASS END=156621456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1265:0,64,255:28,0 chr1 156621457 . G . PASS END=156621461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:30,0 chr1 156621462 . G . PASS END=156621472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,79,255:26,0 chr1 156621473 . C . PASS END=156621474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 156621475 . C . PASS END=156621475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:19,0 chr1 156621476 . T . PASS END=156621480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,65,255:21,0 chr1 156621481 . G . PASS END=156621481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 156622040 . A . PASS END=156622040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 156622041 . A . PASS END=156622041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 156622042 . T . PASS END=156622048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 156622049 . C . PASS END=156622049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 156622050 . A . PASS END=156622054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:25,0 chr1 156622055 . C . PASS END=156622057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 156622058 . T . PASS END=156622058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 156622059 . G . PASS END=156622059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr1 156622060 . G . PASS END=156622060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 156622061 . T . PASS END=156622081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1141:0,83,255:33,0 chr1 156622082 . A . PASS END=156622082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 156622083 . A . PASS END=156622084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1219:0,91,255:32,0 chr1 156622085 . A . PASS END=156622085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:32,0 chr1 156622086 . G . PASS END=156622087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 156622088 . A . PASS END=156622089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:69:36:0,69,1243:0,69,255:34,0 chr1 156622090 . G . PASS END=156622193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:81:34:0,81,1215:0,84,255:39,0 chr1 156622194 . C . PASS END=156622205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 156622206 . C . PASS END=156622223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1028:0,89,255:30,0 chr1 156622224 . T . PASS END=156622224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,856:0,78,255:28,0 chr1 156622225 . C . PASS END=156622240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1124:0,87,255:30,0 chr1 156622241 . C . PASS END=156622241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:22,0 chr1 156622242 . A . PASS END=156622264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 156622265 . A . PASS END=156622265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,720:0,11,255:19,0 chr1 156622266 . G . PASS END=156622274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 156622275 . A . PASS END=156622312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,698:0,44,255:19,0 chr1 156622313 . A . PASS END=156622314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156622315 . G . PASS END=156622315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 156622316 . G . PASS END=156622316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156622317 . A . PASS END=156622317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 156622318 . G . PASS END=156622323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 156622324 . G . PASS END=156622324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 156622325 . A . PASS END=156622348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,845:0,65,255:25,0 chr1 156622349 . A . PASS END=156622349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 156622350 . T . PASS END=156622351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 156622352 . G . PASS END=156622353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,853:0,41,255:21,0 chr1 156622354 . C . PASS END=156622365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 156622366 . A . PASS END=156622366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 156622367 . C . PASS END=156622373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:25,0 chr1 156622374 . C . PASS END=156622375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 156622376 . C . PASS END=156622393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr1 156622394 . T . PASS END=156622395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156622396 . G . PASS END=156622396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 156622397 . C . PASS END=156622397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:27,0 chr1 156622398 . A . PASS END=156622398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 156622399 . T . PASS END=156622407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156622408 . C . PASS END=156622410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1186:0,93,255:31,0 chr1 156622411 . T . PASS END=156622411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 156622412 . C . PASS END=156622412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 156622413 . C . PASS END=156622413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr1 156622414 . A . PASS END=156622415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr1 156622416 . T . PASS END=156622416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:30,0 chr1 156622417 . C . PASS END=156622454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1101:0,80,255:35,0 chr1 156622455 . T . PASS END=156622455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:29,0 chr1 156622456 . C . PASS END=156622456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 156622457 . C . PASS END=156622457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:30,0 chr1 156622458 . T . PASS END=156622472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:31,0 chr1 156622473 . C . PASS END=156622535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,939:0,69,255:26,0 chr1 156622536 . A . PASS END=156622536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156622537 . C . PASS END=156622545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 156622546 . G . PASS END=156622555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:52:23:0,52,784:0,52,255:19,0 chr1 156622556 . G . PASS END=156622558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 156622559 . A . PASS END=156622559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 156622560 . G . PASS END=156622575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 156622576 . G . PASS END=156622576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 156622577 . A . PASS END=156622585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 156622586 . C . PASS END=156622593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr1 156622594 . A . PASS END=156622594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156622595 . C . PASS END=156622734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:28:0,81,1215:0,84,255:40,0 chr1 156622735 . C . PASS END=156622735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156622736 . C . PASS END=156622739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 156622740 . G . PASS END=156622754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,923:0,64,255:26,0 chr1 156622755 . C . PASS END=156622755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:19,0 chr1 156622756 . T . PASS END=156622758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr1 156626074 . G . PASS END=156626093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1166:0,86,255:34,0 chr1 156626094 . T . PASS END=156626094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:31,0 chr1 156626095 . G . PASS END=156626149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1164:0,83,255:37,0 chr1 156626150 . G . PASS END=156626150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1131:0,52,255:29,0 chr1 156626151 . C . PASS END=156626155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 156626156 . C . PASS END=156626156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:25,0 chr1 156626157 . T . PASS END=156626157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,909:0,43,255:23,0 chr1 156626158 . A . PASS END=156626166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,71,255:25,0 chr1 156626167 . A . PASS END=156626167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,861:0,26,255:19,0 chr1 156626168 . C . PASS END=156626168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 156626169 . C . PASS END=156626171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,723:0,52,255:19,0 chr1 156626172 . T . PASS END=156626172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,613:0,19,255:16,0 chr1 156626173 . G . PASS END=156626181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,49,255:19,0 chr1 156626730 . G . PASS END=156626735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 156626736 . G . PASS END=156626736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 156626737 . C . PASS END=156626860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1064:0,82,255:40,0 chr1 156626861 . A . PASS END=156626861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 156626862 . C . PASS END=156626867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156626868 . A . PASS END=156626882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:26:0,72,1080:0,78,255:26,0 chr1 156626883 . T . PASS END=156626888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:24,0 chr1 156627467 . A . PASS END=156627472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,684:0,57,255:19,0 chr1 156627473 . A . PASS END=156627479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,743:0,60,255:22,0 chr1 156627480 . G . PASS END=156627480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 156627481 . T . PASS END=156627547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,815:0,62,255:26,0 chr1 156627548 . T . PASS END=156627548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 156627549 . G . PASS END=156627549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156627919 . C . PASS END=156628011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1141:0,82,255:40,0 chr1 156628012 . A . PASS END=156628012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 156628013 . G . PASS END=156628034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1310:0,92,255:38,0 chr1 156628035 . C . PASS END=156628053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:24:0,63,945:0,72,255:24,0 chr1 156628054 . A . PASS END=156628063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,56,255:19,0 chr1 156628335 . T . PASS END=156628335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 156628336 . G . PASS END=156628380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:19,0 chr1 156628381 . C . PASS END=156628381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 156628382 . C . PASS END=156628382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 156628383 . G . PASS END=156628384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 156628385 . C . PASS END=156628389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156628390 . G . PASS END=156628391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156628392 . T . PASS END=156628392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156628393 . G . PASS END=156628408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,755:0,66,255:24,0 chr1 156628409 . A . PASS END=156628409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr1 156628410 . C . PASS END=156628470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,807:0,66,255:25,0 chr1 156628471 . C . PASS END=156628525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,545:0,45,255:19,0 chr1 156628819 . G . PASS END=156628915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr1 156628916 . C . PASS END=156628926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:24,0 chr1 156639114 . C . PASS END=156639116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 156639117 . G . PASS END=156639125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 156639126 . T . PASS END=156639126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 156639127 . G . PASS END=156639147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:26,0 chr1 156639148 . C . PASS END=156639154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 156639155 . T . PASS END=156639155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 156639156 . C . PASS END=156639160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 156639161 . T . PASS END=156639164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156639165 . C . PASS END=156639168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156639169 . A . PASS END=156639177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 156639178 . C . PASS END=156639200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 156639201 . C . PASS END=156639204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 156639205 . G . PASS END=156639208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156639209 . A . PASS END=156639233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,898:0,62,255:25,0 chr1 156639234 . C . PASS END=156639235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,831:0,55,255:20,0 chr1 156639236 . C . PASS END=156639244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 156639245 . A . PASS END=156639270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 156639271 . A . PASS END=156639271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 156639272 . C . PASS END=156639282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 156639283 . C . PASS END=156639289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 156639290 . C . PASS END=156639290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 156639291 . C . PASS END=156639294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 156639295 . T . PASS END=156639316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr1 156639317 . T . PASS END=156639319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 156639320 . T . PASS END=156639327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 156639328 . C . PASS END=156639428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,330:0,36,255:13,0 chr1 156639429 . T . PASS END=156639429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr1 156639430 . A . PASS END=156639434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 156639435 . G . PASS END=156639435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 156639436 . C . PASS END=156639436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:11,0 chr1 156639437 . C . PASS END=156639445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 156639446 . T . PASS END=156639459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 156639460 . A . PASS END=156639460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156639461 . A . PASS END=156639463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 156639464 . A . PASS END=156639470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 156639471 . G . PASS END=156639471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156639472 . T . PASS END=156639472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156639473 . C . PASS END=156639474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156639475 . G . PASS END=156639475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156639476 . A . PASS END=156639494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 156639495 . A . PASS END=156639496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156639497 . G . PASS END=156639498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156639499 . T . PASS END=156639506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 156639507 . G . PASS END=156639522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 156639523 . T . PASS END=156639523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 156639524 . C . PASS END=156639542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:17,0 chr1 156639543 . A . PASS END=156639543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 156639544 . C . PASS END=156639546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 156639547 . G . PASS END=156639583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,629:0,41,255:18,0 chr1 156639584 . T C, 48.97 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=3.096;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:6,4,0:5,4,0:48:84,0,50,286,385,671:245,0,255:9,0:4.8968e+01,7.6882e-05,5.3000e+01,2.8614e+02,4.2005e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,6,2:8,3,4,4 chr1 156639585 . G . PASS END=156639635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:17,0 chr1 156639636 . G A, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=1.203;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:3,4,0:5,5,0:35:85,0,32,311,278,589:255,0,251:8,0:5.0001e+01,1.4351e-03,3.4943e+01,3.1084e+02,3.1291e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,0,3,6:3,5,4,5 chr1 156639637 . G . PASS END=156639673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,612:0,41,255:19,0 chr1 156639674 . G . PASS END=156639686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,637:0,54,255:19,0 chr1 156639687 . C . PASS END=156639699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:22,0 chr1 156639700 . T . PASS END=156639700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:20,0 chr1 156639701 . C . PASS END=156639702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 156639703 . T . PASS END=156639703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 156639704 . G . PASS END=156639705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 156639706 . T . PASS END=156639706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 156639707 . C . PASS END=156639707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,678:0,38,255:21,0 chr1 156639708 . C . PASS END=156639708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156639709 . T . PASS END=156639709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 156639710 . C . PASS END=156639713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 156639714 . T . PASS END=156639721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 156639722 . C . PASS END=156639722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 156639723 . C . PASS END=156639723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156639724 . C . PASS END=156639724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr1 156639725 . C . PASS END=156639735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,903:0,75,255:26,0 chr1 156639736 . T . PASS END=156639736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 156639737 . C . PASS END=156639752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,872:0,61,255:25,0 chr1 156639753 . G A, 49.01 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=0.882;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:5,5,0:10,6,0:48:84,0,50,393,448,841:255,0,255:14,0:4.9013e+01,7.6364e-05,5.3000e+01,3.9335e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,3,8:9,6,3,8 chr1 156639754 . G . PASS END=156639760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:21,0 chr1 156639761 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=1.038;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,15,0:0.577,0.000:26:5,5,0:6,10,0:48:85,0,49,520,377,898:255,0,255:10,0:5.0000e+01,7.2999e-05,5.1658e+01,4.5000e+02,4.1219e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,4,11:4,7,8,7 chr1 156639762 . A . PASS END=156639766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:21,0 chr1 156639767 . G . PASS END=156639767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 156639768 . A . PASS END=156639768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 156639769 . T . PASS END=156639769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156639770 . C . PASS END=156639770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 156639771 . C . PASS END=156639773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 156639774 . G . PASS END=156639782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 156639783 . A . PASS END=156639783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:18,0 chr1 156639784 . T . PASS END=156639799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:18,0 chr1 156639800 . G . PASS END=156639800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:16,0 chr1 156639801 . C . PASS END=156639801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 156639802 . A . PASS END=156639804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:18,0 chr1 156639805 . T . PASS END=156639805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,602:0,24,255:14,0 chr1 156639806 . G . PASS END=156639806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:15,0 chr1 156639807 . G . PASS END=156639807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:16,0 chr1 156639808 . C . PASS END=156639809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:17,0 chr1 156639810 . C . PASS END=156639810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr1 156639811 . A . PASS END=156639811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 156639812 . G . PASS END=156639812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,604:0,10,255:15,0 chr1 156639813 . A . PASS END=156639813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 156639814 . G . LowGQ END=156639814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,549:7,0,255:15,0 chr1 156639815 . G . PASS END=156639816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:17,0 chr1 156639817 . T . PASS END=156639817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 156639818 . C . PASS END=156639819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 156639820 . G . PASS END=156639820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 156639821 . C . PASS END=156639821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156639822 . C . PASS END=156639822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 156639823 . A . PASS END=156639828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,765:0,50,255:19,0 chr1 156639829 . C . PASS END=156639829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:18,0 chr1 156639830 . C . PASS END=156639831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,790:0,50,255:19,0 chr1 156639832 . G . PASS END=156639833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156639834 . G . PASS END=156639834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156639835 . A . LowGQ END=156639835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,667:6,0,255:17,0 chr1 156639836 . C . PASS END=156639838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:18,0 chr1 156639839 . C . PASS END=156639839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:16,0 chr1 156639840 . A . PASS END=156639846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,590:0,40,255:17,0 chr1 156639847 . A . PASS END=156639847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:16,0 chr1 156639848 . A . PASS END=156639849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 156639850 . G . PASS END=156639850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 156639851 . G . PASS END=156639853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:17,0 chr1 156639854 . C . PASS END=156639854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 156639855 . C . PASS END=156639857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 156639858 . A . PASS END=156639858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156639859 . G . PASS END=156639860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156639861 . C . PASS END=156639861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156639862 . C . PASS END=156639862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 156639863 . C . PASS END=156639864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156639865 . A . PASS END=156639865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 156639866 . G . PASS END=156639866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156639867 . G . PASS END=156639867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:18,0 chr1 156639868 . T . PASS END=156639877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156639878 . C . PASS END=156639884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 156639885 . C . PASS END=156639895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,759:0,50,255:18,0 chr1 156639896 . C . PASS END=156639896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 156639897 . A . PASS END=156639931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,50,255:19,0 chr1 156639932 . C . PASS END=156639932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 156639933 . C . PASS END=156639941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,692:0,57,255:19,0 chr1 156639942 . G . PASS END=156639989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 156639990 . C . PASS END=156640041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,607:0,51,255:18,0 chr1 156640042 . C . PASS END=156640043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 156640044 . C . PASS END=156640066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 156640067 . G . PASS END=156640067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 156640068 . G . PASS END=156640076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 156640077 . C . PASS END=156640098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,540:0,32,255:13,0 chr1 156640099 . G . PASS END=156640099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 156640100 . T . PASS END=156640107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 156640108 . A . PASS END=156640108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 156640109 . G . PASS END=156640115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156640116 . C . PASS END=156640116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 156640117 . T . PASS END=156640118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 156640119 . C . PASS END=156640126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 156640127 . C . PASS END=156640145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 156640146 . T . PASS END=156640146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 156640147 . T . PASS END=156640155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 156640156 . G A, 44.99 PASS DP=16;MQ=250.00;MQRankSum=3.059;ReadPosRankSum=1.020;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,5,0:0.312,0.000:16:8,1,0:3,4,0:44:80,0,50,171,393,564:130,0,255:10,0:4.4988e+01,1.5946e-04,5.3000e+01,1.7090e+02,4.2800e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,3,2:7,4,3,2 chr1 156640157 . G . PASS END=156640168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 156640169 . T . PASS END=156640180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 156640181 . C . PASS END=156640182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156640183 . A . PASS END=156640193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 156640194 . C . PASS END=156640235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 156640236 . C . PASS END=156640236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 156640237 . C . PASS END=156640237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 156640238 . C . PASS END=156640238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 156640239 . C . PASS END=156640240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 156640241 . A . PASS END=156640241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,360:0,22,255:12,0 chr1 156640242 . G . PASS END=156640243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 156640244 . T . PASS END=156640245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 156640246 . G . PASS END=156640246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 156640247 . C . PASS END=156640247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 156640248 . C . PASS END=156640253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 156640254 . A . PASS END=156640255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 156640256 . T . PASS END=156640256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 156640257 . C . PASS END=156640270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 156640271 . G . PASS END=156640271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156640272 . C . PASS END=156640272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 156640273 . T . PASS END=156640284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 156640285 . G . PASS END=156640285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 156640286 . C . PASS END=156640287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 156640288 . T . PASS END=156640288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 156640289 . C . PASS END=156640299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:17,0 chr1 156640300 . G . PASS END=156640300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 156640301 . G . PASS END=156640303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156640304 . T . PASS END=156640304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 156640305 . G . PASS END=156640307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,673:0,41,255:17,0 chr1 156640308 . C T, 50.00 PASS DP=19;MQ=247.41;MQRankSum=3.633;ReadPosRankSum=1.184;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:2,5,0:7,5,0:48:85,0,50,329,306,635:255,0,255:9,0:5.0000e+01,6.5492e-05,5.2931e+01,3.2869e+02,3.4072e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,6,4:2,7,3,7 chr1 156640309 . G . PASS END=156640309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 156640310 . T . PASS END=156640329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 156640330 . A . PASS END=156640333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 156640334 . G . PASS END=156640334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 156640335 . T . PASS END=156640345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,884:0,63,255:23,0 chr1 156640346 . C . PASS END=156640352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr1 156640353 . T . PASS END=156640354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 156640355 . C . PASS END=156640356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 156640357 . T . PASS END=156640357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156640358 . C . PASS END=156640358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156640359 . T . PASS END=156640359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:20,0 chr1 156640360 . G . PASS END=156640368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 156640369 . G . PASS END=156640369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr1 156640370 . G . PASS END=156640377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156640378 . G . PASS END=156640378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156640379 . A . PASS END=156640396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,845:0,63,255:22,0 chr1 156640397 . T . PASS END=156640397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 156640398 . G . PASS END=156640402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156640403 . C . PASS END=156640403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 156640404 . C . PASS END=156640404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156640405 . A . PASS END=156640406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156640407 . G . PASS END=156640424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr1 156640425 . C . PASS END=156640425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 156640426 . T . PASS END=156640432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156640433 . C . PASS END=156640434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156640435 . C . PASS END=156640436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156640437 . C . PASS END=156640437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr1 156640438 . C . PASS END=156640446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,760:0,63,255:21,0 chr1 156640447 . T . PASS END=156640449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156640450 . G . PASS END=156640450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156640451 . C . PASS END=156640451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 156640452 . C . PASS END=156640459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 156640460 . C . PASS END=156640460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 156640461 . C . PASS END=156640465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 156640466 . T . PASS END=156640475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:25,0 chr1 156640476 . G . PASS END=156640476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 156640477 . G . PASS END=156640486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr1 156640487 . A . PASS END=156640487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:21,0 chr1 156640488 . A . PASS END=156640502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 156640503 . C T, 49.95 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=0.849;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,13,0:0.481,0.000:27:7,9,0:7,4,0:48:85,0,50,465,472,937:255,0,255:14,0:4.9951e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,6,7:9,5,6,7 chr1 156640504 . C . PASS END=156640524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,884:0,61,255:26,0 chr1 156640525 . G . PASS END=156640525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 156640526 . T . PASS END=156640526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 156640527 . C . PASS END=156640540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr1 156640541 . C . PASS END=156640567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1062:0,84,255:31,0 chr1 156640568 . C . PASS END=156640568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 156640569 . C . PASS END=156640578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 156640579 . A . PASS END=156640579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 156640580 . C . PASS END=156640581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 156640582 . C . PASS END=156640582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 156640583 . T . PASS END=156640595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 156640596 . A . PASS END=156640596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,948:0,60,255:26,0 chr1 156640597 . C . PASS END=156640597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156640598 . T . PASS END=156640598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr1 156640599 . C . PASS END=156640602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156640603 . T . PASS END=156640604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156640605 . T . PASS END=156640605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156640606 . T . PASS END=156640614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 156640615 . G . PASS END=156640621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156640622 . T . PASS END=156640636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,992:0,65,255:25,0 chr1 156640637 . T . PASS END=156640637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 156640638 . C . PASS END=156640650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 156640651 . T . PASS END=156640656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 156640657 . A . PASS END=156640657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,681:0,5,255:17,0 chr1 156640658 . G . PASS END=156640658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,705:0,36,255:17,0 chr1 156640659 . C . PASS END=156640661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 156640662 . T . PASS END=156640662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:17,0 chr1 156640663 . C . PASS END=156640665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 156640666 . A . LowGQ END=156640666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,543:4,0,255:14,0 chr1 156640667 . C . PASS END=156640677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,43,255:16,0 chr1 156640678 . G A, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=1.775;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,11,0:0.579,0.000:19:4,4,0:4,7,0:46:85,0,46,185,185,185:255,0,228:6,0:5.0000e+01,1.0070e-04,4.8805e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,7,1,10:3,5,6,5 chr1 156640679 . G . PASS END=156640682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:17,0 chr1 156640683 . T . PASS END=156640683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,551:0,2,255:16,0 chr1 156640684 . G . PASS END=156640685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 156640686 . C . PASS END=156640686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 156640687 . T . PASS END=156640687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 156640688 . C . PASS END=156640688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 156640689 . A . PASS END=156640691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 156640692 . T . PASS END=156640692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:15,0 chr1 156640693 . C . PASS END=156640693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:15,0 chr1 156640694 . C . PASS END=156640695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 156640696 . G . PASS END=156640696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 156640697 . C . PASS END=156640715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,631:0,41,255:19,0 chr1 156640716 . A . PASS END=156640718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 156640719 . C . PASS END=156640732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:21,0 chr1 156640733 . T . PASS END=156640750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,690:0,46,255:19,0 chr1 156640751 . G . PASS END=156640753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156640754 . C . PASS END=156640762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 156640763 . G . PASS END=156640770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156640771 . T . PASS END=156640811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,698:0,57,255:19,0 chr1 156640812 . G . PASS END=156640812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:14,0 chr1 156640813 . G . PASS END=156640818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:15,0 chr1 156640819 . T . PASS END=156640824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 156640825 . C . PASS END=156640826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 156640827 . T . PASS END=156640828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:14,0 chr1 156640829 . G . PASS END=156640850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:15,0 chr1 156640851 . C . PASS END=156640852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156640853 . C . PASS END=156640854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156640855 . T . PASS END=156640859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 156640860 . G . PASS END=156640860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156640861 . T . PASS END=156640862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156640863 . C . PASS END=156640867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156640868 . G . PASS END=156640881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 156640882 . C . PASS END=156640899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,599:0,45,255:19,0 chr1 156640900 . T . PASS END=156640912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:25,0 chr1 156640913 . T . PASS END=156640913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:24,0 chr1 156640914 . C . PASS END=156640919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr1 156640920 . T . PASS END=156640920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 156640921 . T . PASS END=156640929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,856:0,75,255:26,0 chr1 156640930 . G . PASS END=156640933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156640934 . T . PASS END=156640934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156640935 . C . PASS END=156641238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:29:0,80,1197:0,80,255:40,0 chr1 156641239 . T . PASS END=156641239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:40,0 chr1 156641240 . G . PASS END=156641240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1537:0,90,255:40,0 chr1 156641241 . A . PASS END=156641241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:40,0 chr1 156641242 . C . PASS END=156641266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:43:0,90,1500:0,90,255:40,0 chr1 156641267 . A . PASS END=156641267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1438:0,69,255:40,0 chr1 156641268 . T . PASS END=156641275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:82:46:0,82,1408:0,82,255:40,0 chr1 156641276 . T . PASS END=156641276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1496:0,66,255:40,0 chr1 156641277 . C . PASS END=156641557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:38:0,83,1283:0,83,255:40,0 chr1 156641558 . T . PASS END=156641558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1274:0,67,255:32,0 chr1 156641559 . T . PASS END=156641621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1205:0,86,255:35,0 chr1 156641622 . T . PASS END=156641622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:29,0 chr1 156641623 . T . PASS END=156641626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 156641627 . G . PASS END=156641627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:32,0 chr1 156641628 . A . PASS END=156641633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1233:0,86,255:31,0 chr1 156641634 . T . PASS END=156641634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1089:0,72,255:31,0 chr1 156641635 . T . PASS END=156641664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:35:0,91,1243:0,91,255:37,0 chr1 156641665 . T . PASS END=156641665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1127:0,72,255:32,0 chr1 156641666 . G . PASS END=156641845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1073:0,82,255:39,0 chr1 156641846 . T . PASS END=156641846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 156641847 . A . PASS END=156641916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1215:0,84,255:36,0 chr1 156641917 . G . PASS END=156641917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:28,0 chr1 156641918 . C . PASS END=156641963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1255:0,86,255:35,0 chr1 156641964 . C . PASS END=156641966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:34,1 chr1 156641967 . T . PASS END=156642004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:88:35:0,88,1213:0,88,255:37,0 chr1 156642005 . A . PASS END=156642005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1132:0,75,255:32,0 chr1 156642006 . A . PASS END=156642013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:35:0,90,1226:0,91,255:32,0 chr1 156642014 . A . PASS END=156642014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1136:0,74,255:31,0 chr1 156642015 . T . PASS END=156642025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1119:0,82,255:35,0 chr1 156642026 . C . PASS END=156642026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr1 156642027 . C . PASS END=156642032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1212:0,89,255:35,0 chr1 156642033 . T . PASS END=156642033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 156642034 . G . PASS END=156642057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1175:0,91,255:36,0 chr1 156642058 . C . PASS END=156642058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:27,0 chr1 156642059 . C . PASS END=156642060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:30,0 chr1 156642061 . T . PASS END=156642061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr1 156642062 . C . PASS END=156642066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:30,0 chr1 156642067 . G . PASS END=156642068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,962:0,60,255:28,0 chr1 156642069 . T . PASS END=156642080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 156642081 . T . PASS END=156642081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:26,0 chr1 156642082 . T . PASS END=156642085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:27,0 chr1 156642086 . T . PASS END=156642088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156642089 . C . PASS END=156642095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 156642096 . C . PASS END=156642096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:25,0 chr1 156642097 . A . PASS END=156642097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156642098 . G . PASS END=156642098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 156642099 . G . PASS END=156642101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 156642102 . T . PASS END=156642102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr1 156642103 . T . PASS END=156642124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:30:0,82,1103:0,82,255:33,0 chr1 156642125 . T . PASS END=156642125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 156642126 . T . PASS END=156642127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156642128 . C . PASS END=156642128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:28,0 chr1 156642129 . T . PASS END=156642129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 156642130 . G . PASS END=156642140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1148:0,83,255:31,0 chr1 156642141 . T . PASS END=156642141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:30,0 chr1 156642142 . T . PASS END=156642147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 156642148 . A . PASS END=156642148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:26,0 chr1 156642149 . C . PASS END=156642153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1055:0,80,255:28,0 chr1 156642154 . T . PASS END=156642154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 156642155 . C . PASS END=156642156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:30,0 chr1 156642157 . T . PASS END=156642157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 156642158 . T . PASS END=156642226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:31:0,88,1053:0,88,255:37,0 chr1 156642227 . T . PASS END=156642227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:37,0 chr1 156642228 . T . PASS END=156642312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1213:0,86,255:40,0 chr1 156642313 . G . PASS END=156642347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,74,255:26,0 chr1 156642348 . T . PASS END=156642348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 156642349 . T . PASS END=156642349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156642350 . C . PASS END=156642350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 156642351 . T . PASS END=156642351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156642352 . T . PASS END=156642352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:26,0 chr1 156642353 . T . PASS END=156642387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,775:0,61,255:26,0 chr1 156642388 . C . PASS END=156642388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,953:0,37,255:25,0 chr1 156642389 . T . PASS END=156642389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156642390 . G . PASS END=156642393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 156642394 . A . PASS END=156642394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 156642395 . G . PASS END=156642409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1028:0,82,255:31,0 chr1 156642410 . A . PASS END=156642410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 156642411 . T . PASS END=156642424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1180:0,83,255:32,0 chr1 156642425 . A . PASS END=156642425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:30,0 chr1 156642426 . G . PASS END=156642481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1003:0,84,255:40,0 chr1 156642482 . G . PASS END=156642482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1468:0,77,255:38,0 chr1 156642483 . C . PASS END=156642542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:36:0,91,1213:0,91,255:40,0 chr1 156642543 . A . PASS END=156642543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:32,0 chr1 156642544 . G . PASS END=156642555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1243:0,91,255:32,0 chr1 156642556 . G . PASS END=156642556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:31,0 chr1 156642557 . A . PASS END=156642557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1108:0,52,255:30,0 chr1 156642558 . G . PASS END=156642566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1202:0,83,255:34,0 chr1 156642567 . G . PASS END=156642567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr1 156642568 . C . PASS END=156642569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,94,255:30,0 chr1 156642570 . G . PASS END=156642570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:30,0 chr1 156642571 . A . PASS END=156642574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,94,255:30,0 chr1 156642575 . G . PASS END=156642576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:29,0 chr1 156642577 . G . PASS END=156642577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 156642578 . G . PASS END=156642578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1202:0,58,255:29,0 chr1 156642579 . T . PASS END=156642586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1133:0,82,255:31,0 chr1 156642587 . A . PASS END=156642590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:60:33:0,60,1164:0,60,255:30,0 chr1 156642591 . A . PASS END=156642593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr1 156642594 . G . PASS END=156642594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:29,0 chr1 156642595 . T . PASS END=156642603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1247:0,86,255:32,0 chr1 156642604 . G . PASS END=156642609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:33:0,57,855:0,99,255:19,0 chr1 156642610 . C . PASS END=156642617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:20,0 chr1 156642618 . G . PASS END=156642622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:20:0,57,855:0,60,255:19,0 chr1 156642623 . C . PASS END=156642640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 156642641 . G . PASS END=156642647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:17,0 chr1 156642648 . T . PASS END=156642648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:15,0 chr1 156642649 . G . PASS END=156642668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 156642669 . A . PASS END=156642669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 156642670 . G . PASS END=156642671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156642672 . A . PASS END=156642672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 156642673 . A . PASS END=156642682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,599:0,48,255:17,0 chr1 156642683 . T . PASS END=156642683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 156642684 . G . PASS END=156642688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 156642689 . C . PASS END=156642689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 156642690 . A . PASS END=156642697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 156642698 . G . PASS END=156642712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr1 156642713 . G . PASS END=156642715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156642716 . T . PASS END=156642717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156642718 . C . PASS END=156642729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:16:0,40,509:0,40,255:18,0 chr1 156642730 . G . PASS END=156642732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:21,0 chr1 156642733 . T . PASS END=156642733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 156642734 . G . PASS END=156642737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156642738 . C . PASS END=156642740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 156642741 . A . PASS END=156642741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156642742 . G . PASS END=156642742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:19,0 chr1 156642743 . A . PASS END=156642744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156642745 . A . PASS END=156642745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 156642746 . G . PASS END=156642764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 156642765 . G . PASS END=156642775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 156642776 . C . PASS END=156642776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 156642777 . T . PASS END=156642777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 156642778 . A . PASS END=156642778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 156642779 . C . PASS END=156642803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,597:0,40,255:19,0 chr1 156642804 . G . PASS END=156642804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 156642805 . G . PASS END=156642808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 156642809 . G . PASS END=156642809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 156642810 . G . PASS END=156642810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:19,0 chr1 156642811 . A . PASS END=156642811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156642812 . T . PASS END=156642813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 156642814 . G . PASS END=156642819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156642820 . C . PASS END=156642826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 156642827 . A . PASS END=156642827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:20,0 chr1 156642828 . G . PASS END=156642836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 156642837 . A . PASS END=156642837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 156642838 . C . PASS END=156642863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:21:0,61,784:0,61,255:25,0 chr1 156642864 . A . PASS END=156642864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 156642865 . A . PASS END=156642868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 156642869 . A . PASS END=156642869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 156642870 . G . PASS END=156642876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 156642877 . A . PASS END=156642879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:52:23:0,52,784:0,52,255:19,0 chr1 156642880 . G . PASS END=156642881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156642882 . T . PASS END=156642882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156642883 . G . PASS END=156642888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 156642889 . A . PASS END=156642889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr1 156642890 . G . PASS END=156642893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156642894 . A . PASS END=156642894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 156642895 . G . PASS END=156642896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156642897 . A . PASS END=156642897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 156642898 . G . PASS END=156642901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 156642902 . A . PASS END=156642902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,580:0,13,255:17,0 chr1 156642903 . G . PASS END=156642905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 156642906 . T . PASS END=156642907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 156642908 . A . PASS END=156642915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,850:0,72,255:26,0 chr1 156642916 . G . PASS END=156642916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:24,0 chr1 156642917 . A . PASS END=156642917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 156642918 . A . PASS END=156642918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:25,0 chr1 156642919 . G . PASS END=156642919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,864:0,61,255:25,0 chr1 156642920 . T . PASS END=156642920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,784:0,45,255:24,0 chr1 156642921 . T . PASS END=156642958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,848:0,61,255:26,0 chr1 156642959 . C . PASS END=156642959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 156642960 . C . PASS END=156642962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156642963 . T . PASS END=156642997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 156643246 . C . PASS END=156643248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 156643249 . G . PASS END=156643249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 156643250 . A . PASS END=156643257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 156643258 . G . PASS END=156643263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:76:29:0,76,1064:0,76,255:27,0 chr1 156643264 . T . PASS END=156643302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 156643303 . C . PASS END=156643319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 156645008 . C . PASS END=156645010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 156645011 . T . PASS END=156645016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 156645017 . G . PASS END=156645017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 156645018 . C . PASS END=156645018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 156645019 . C . PASS END=156645019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 156645020 . A . PASS END=156645020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 156645021 . C . PASS END=156645028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 156645029 . C . PASS END=156645029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 156645030 . T . PASS END=156645067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:18,0 chr1 156645068 . T . PASS END=156645068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 156645069 . C . PASS END=156645128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:17,0 chr1 156645129 . C . PASS END=156645132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 156646274 . C . PASS END=156646275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:5,0 chr1 156646276 . G . PASS END=156646276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr1 156646277 . G . PASS END=156646277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 156646278 . A . PASS END=156646279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,211:6,0 chr1 156646280 . C . PASS END=156646280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:5,0 chr1 156646281 . T . PASS END=156646281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,247:6,0 chr1 156646282 . T . PASS END=156646285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 156646286 . A . PASS END=156646286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 156646287 . G . PASS END=156646292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 156646293 . C . LowGQ END=156646293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:8,0 chr1 156646294 . G . PASS END=156646295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 156646296 . A . LowGQ END=156646296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:8,0 chr1 156646297 . G . PASS END=156646297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 156646298 . C . PASS END=156646299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 156646300 . G . PASS END=156646300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,211:0,10,211:8,0 chr1 156646301 . C . PASS END=156646302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 156646303 . C . LowGQ END=156646303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,235:4,0,239:8,0 chr1 156646304 . C . PASS END=156646305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 156646306 . G . PASS END=156646306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 156646307 . C . PASS END=156646307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 156646308 . C . PASS END=156646308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 156646309 . A . PASS END=156646310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 156646311 . C . PASS END=156646311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 156646312 . G . PASS END=156646313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 156646314 . C . PASS END=156646314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 156646315 . C . PASS END=156646315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 156646316 . C . PASS END=156646316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 156646317 . T . PASS END=156646318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 156646319 . C . PASS END=156646319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 156646320 . A . PASS END=156646322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr1 156646323 . C . PASS END=156646323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,272:0,13,255:9,0 chr1 156646324 . T . PASS END=156646324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 156646325 . C . LowGQ END=156646325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,247:3,0,250:8,0 chr1 156646326 . T . PASS END=156646326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 156646327 . G . PASS END=156646327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:10,0 chr1 156646328 . T . PASS END=156646328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 156646329 . T . PASS END=156646329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 156646330 . C . PASS END=156646332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 156646333 . A . PASS END=156646334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 156646335 . G . PASS END=156646335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 156646336 . C . PASS END=156646336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 156646337 . T . PASS END=156646341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 156646342 . T . PASS END=156646342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr1 156646343 . G . PASS END=156646360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,344:0,33,255:11,0 chr1 156646361 . G . PASS END=156646362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,303:0,16,255:9,0 chr1 156646363 . G . PASS END=156646365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156646366 . C . LowGQ END=156646366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,274:6,0,255:9,0 chr1 156646367 . A . PASS END=156646369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 156646370 . C . PASS END=156646370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 156646371 . T . PASS END=156646372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 156646373 . G . PASS END=156646374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,199:0,13,199:9,0 chr1 156646375 . G . PASS END=156646375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 156646376 . C . PASS END=156646378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,266:0,16,255:10,0 chr1 156646379 . C . PASS END=156646379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 156646380 . T . LowGQ END=156646380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,257:14,0,255:9,0 chr1 156646381 . G . PASS END=156646381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr1 156646382 . C . PASS END=156646382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,358:0,33,255:11,0 chr1 156646383 . A . PASS END=156646383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 156646384 . G . PASS END=156646385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,338:0,36,255:12,0 chr1 156646386 . T . LowGQ END=156646386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,233:14,0,247:9,0 chr1 156646387 . C . PASS END=156646388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 156646389 . A . PASS END=156646389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,299:0,19,255:11,0 chr1 156646390 . G . PASS END=156646401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,354:0,36,255:12,0 chr1 156646402 . G . PASS END=156646402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 156646403 . G . PASS END=156646405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:8,0 chr1 156646406 . A . PASS END=156646408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 156646409 . C . PASS END=156646421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 156646422 . C . PASS END=156646431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156646432 . C . PASS END=156646434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 156646435 . G . PASS END=156646435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 156646436 . G . PASS END=156646436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 156646437 . G . PASS END=156646437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 156646438 . C . PASS END=156646458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 156646459 . T . LowGQ END=156646459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,410:10,0,255:12,0 chr1 156646460 . G . PASS END=156646469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr1 156646470 . C . PASS END=156646483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,465:0,36,255:12,0 chr1 156646484 . G . PASS END=156646486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 156646487 . C . PASS END=156646493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 156646494 . C . PASS END=156646494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 156646495 . C . PASS END=156646496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 156646497 . C . PASS END=156646502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 156646503 . G . PASS END=156646512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 156646513 . G . PASS END=156646515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156646516 . G . PASS END=156646516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,437:0,6,255:12,0 chr1 156646517 . C . PASS END=156646536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:12,0 chr1 156646537 . C . PASS END=156646548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 156646549 . C . LowGQ END=156646549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:8,0 chr1 156646550 . G . PASS END=156646555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr1 156646556 . C . PASS END=156646556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 156646557 . C . PASS END=156646595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr1 156646596 . T . PASS END=156646596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 156646597 . G . PASS END=156646602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 156646603 . T . PASS END=156646603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 156646604 . C . PASS END=156646617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,333:0,27,255:9,0 chr1 156646618 . C . PASS END=156646630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 156646631 . C . PASS END=156646639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 156646640 . A . PASS END=156646652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr1 156646653 . C . PASS END=156646653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 156646654 . G . PASS END=156646667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 156646668 . A G, 50.00 PASS DP=10;MQ=250.00;MQRankSum=2.450;ReadPosRankSum=1.668;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,5,0:0.500,0.000:10:5,3,0:0,2,0:48:85,0,50,178,179,356:164,0,164:5,0:5.0000e+01,6.5233e-05,5.3000e+01,1.7761e+02,2.1352e+02,3.5935e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,2,3:3,2,4,1 chr1 156646669 . C . PASS END=156646675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 156646676 . A . PASS END=156646677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 156646678 . T . PASS END=156646679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156646680 . A . PASS END=156646692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:10,0 chr1 156646693 . C . PASS END=156646698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156646699 . T . PASS END=156646705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156646706 . C . PASS END=156646717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 156646718 . C . PASS END=156646737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 156646738 . C . PASS END=156646744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 156646745 . C . PASS END=156646753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156646754 . G . PASS END=156646806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 156646807 . G . PASS END=156646807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:12,0 chr1 156646808 . G . PASS END=156646808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156646809 . T . PASS END=156646809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 156646810 . T . PASS END=156646812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 156646813 . C . PASS END=156646813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156646814 . G . PASS END=156646815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156646816 . G . PASS END=156646816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:12,0 chr1 156646817 . C . PASS END=156646818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156646819 . C . PASS END=156646819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 156646820 . C . PASS END=156646820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156646821 . A . PASS END=156646821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 156646822 . C . PASS END=156646832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156646833 . T . PASS END=156646836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156646837 . T . PASS END=156646837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:12,0 chr1 156646838 . C . PASS END=156646841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 156646842 . C . PASS END=156646843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156646844 . C . PASS END=156646850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 156646851 . T . PASS END=156646851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 156646852 . G . PASS END=156646852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 156646853 . G . PASS END=156646854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:10,0 chr1 156646855 . C . PASS END=156646855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 156646856 . A . PASS END=156646856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 156646857 . A . PASS END=156646857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 156646858 . C . PASS END=156646858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:11,0 chr1 156646859 . G . PASS END=156646861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 156646862 . G . PASS END=156646862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 156646863 . G . PASS END=156646866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 156646867 . G . PASS END=156646867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 156646868 . C . PASS END=156646870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 156646871 . G . PASS END=156646871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 156646872 . G . PASS END=156646882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 156646883 . G . PASS END=156646883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 156646884 . T . PASS END=156646885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 156646886 . G . PASS END=156646886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 156646887 . T . PASS END=156646888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156646889 . G . PASS END=156646889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 156646890 . G . PASS END=156646890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156646891 . C . PASS END=156646891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 156646892 . A . PASS END=156646892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156646893 . T . PASS END=156646893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156646894 . G . PASS END=156646925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr1 156646926 . C . PASS END=156646926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 156646927 . G . PASS END=156646947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,665:0,41,255:17,0 chr1 156646948 . T . PASS END=156646948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 156646949 . G . PASS END=156646949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 156646950 . A . PASS END=156646950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:16,0 chr1 156646951 . G . PASS END=156646951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:15,0 chr1 156646952 . C . PASS END=156646952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 156646953 . A . PASS END=156646953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 156646954 . G . PASS END=156646954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 156646955 . C . PASS END=156646955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 156646956 . T . PASS END=156646956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 156646957 . C . PASS END=156646975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:19,0 chr1 156646976 . C . PASS END=156646976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr1 156646977 . T . PASS END=156646988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 156646989 . A . PASS END=156646989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:13,0 chr1 156646990 . G . PASS END=156646990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156646991 . G . PASS END=156646991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 156646992 . T . PASS END=156646993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 156646994 . G . PASS END=156646994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156646995 . G . PASS END=156647000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156647001 . A . PASS END=156647001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr1 156647002 . G . PASS END=156647002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156647003 . G . PASS END=156647003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 156647004 . C . PASS END=156647008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 156647009 . A . PASS END=156647009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,382:0,12,255:12,0 chr1 156647010 . T . PASS END=156647010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156647011 . T . PASS END=156647011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 156647012 . G . PASS END=156647015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr1 156647016 . T . PASS END=156647016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 156647017 . C . PASS END=156647022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr1 156647023 . T . PASS END=156647023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 156647024 . C . PASS END=156647025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,468:0,45,255:16,0 chr1 156647026 . G . LowGQ END=156647026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,313:2,0,255:13,0 chr1 156647027 . A . PASS END=156647037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,515:0,48,255:16,0 chr1 156647038 . C . PASS END=156647044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 156647045 . G . PASS END=156647045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 156647046 . C . PASS END=156647046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 156647047 . A . PASS END=156647047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 156647048 . G . PASS END=156647051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 156647052 . T . PASS END=156647052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 156647053 . C . PASS END=156647056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156669818 . T . PASS END=156669868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:48:0,89,1660:0,89,255:40,0 chr1 156670334 . C . PASS END=156670450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:32:0,89,1233:0,89,255:40,0 chr1 156670666 . C . PASS END=156670804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:34:0,96,1288:0,100,255:40,0 chr1 156670805 . G . PASS END=156670805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1412:0,68,255:34,0 chr1 156670806 . C . PASS END=156670832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,95,255:36,0 chr1 156670833 . T . PASS END=156670843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:26,0 chr1 156670844 . C . PASS END=156670844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 156675169 . C . PASS END=156675238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:47:0,84,1626:0,84,255:40,0 chr1 156693141 . C . PASS END=156693254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:55:0,120,1800:0,164,255:40,0 chr1 156693940 . C . PASS END=156693941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,726:0,66,255:22,0 chr1 156693942 . G . PASS END=156693942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 156693943 . G . PASS END=156693944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 156693945 . T . PASS END=156693946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 156693947 . T . PASS END=156693947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156693948 . C . PASS END=156693948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 156693949 . C . PASS END=156693949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156693950 . C . PASS END=156693950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156693951 . G . PASS END=156693951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156693952 . G . PASS END=156693952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 156693953 . T . PASS END=156693956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156693957 . G . PASS END=156693958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,868:0,44,255:24,0 chr1 156693959 . A . PASS END=156693960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 156693961 . C . PASS END=156693962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:25:0,45,831:0,45,255:24,0 chr1 156693963 . T . PASS END=156693963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr1 156693964 . C . PASS END=156693965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,895:0,81,255:27,0 chr1 156693966 . T . PASS END=156693966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 156693967 . G . PASS END=156693972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:28,0 chr1 156693973 . A . PASS END=156693973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,924:0,70,255:27,0 chr1 156693974 . T . PASS END=156693975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156693976 . C . PASS END=156693977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,883:0,70,255:27,0 chr1 156693978 . T . PASS END=156693978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:27,0 chr1 156693979 . C . PASS END=156693979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 156693980 . A . PASS END=156693980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:26,0 chr1 156693981 . G . PASS END=156693982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,992:0,68,255:27,0 chr1 156693983 . G . PASS END=156693985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,975:0,84,255:29,0 chr1 156693986 . A . PASS END=156693986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,845:0,37,255:26,0 chr1 156693987 . T . PASS END=156693987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:28,0 chr1 156693988 . G . PASS END=156693989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1033:0,87,255:31,0 chr1 156693990 . T . PASS END=156693990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 156693991 . G . PASS END=156693994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1148:0,93,255:31,0 chr1 156693995 . T . PASS END=156693995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr1 156693996 . T . PASS END=156693998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:31,0 chr1 156693999 . C . PASS END=156693999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1072:0,52,255:28,0 chr1 156694000 . C . PASS END=156694016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1111:0,82,255:31,0 chr1 156694017 . G . PASS END=156694017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:28,0 chr1 156694018 . G . PASS END=156694018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 156694019 . T . PASS END=156694020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:40:32:0,40,875:0,40,255:26,0 chr1 156694021 . G . PASS END=156694022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,995:0,65,255:28,0 chr1 156694023 . G . PASS END=156694025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:30,0 chr1 156694026 . G . PASS END=156694026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 156694027 . G . PASS END=156694140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:32:0,82,1280:0,82,255:40,0 chr1 156694255 . C . PASS END=156694356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:41:0,102,1530:0,107,255:40,0 chr1 156696698 . C . PASS END=156696698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 156696699 . T . PASS END=156696707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:25,0 chr1 156696708 . G . PASS END=156696708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 156696709 . C . PASS END=156696711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:25:0,67,909:0,67,255:27,0 chr1 156696712 . T . PASS END=156696718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,995:0,84,255:30,0 chr1 156696719 . G . PASS END=156696719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 156696720 . G . PASS END=156696723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1166:0,93,255:32,0 chr1 156696724 . T . PASS END=156696724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:31,0 chr1 156696725 . G . PASS END=156696725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1235:0,99,255:33,0 chr1 156696726 . G . PASS END=156696726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr1 156696727 . C . PASS END=156696739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1190:0,89,255:35,0 chr1 156696740 . C . PASS END=156696740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:31,0 chr1 156696741 . T . PASS END=156696741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 156696742 . G . PASS END=156696742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:32,0 chr1 156696743 . C . PASS END=156697018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:81:37:0,81,1319:0,81,255:40,0 chr1 156697019 . C . PASS END=156697055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,152,255:40,0 chr1 156697056 . T C, 50.00 PASS DP=68;MQ=245.48;MQRankSum=4.273;ReadPosRankSum=5.787;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,37,0:0.544,0.000:68:16,12,0:15,25,0:48:85,0,49,1323,1072,2395:255,0,255:29,0:5.0000e+01,6.9116e-05,5.2270e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,9,11,26:17,14,22,15 chr1 156697057 . T . PASS END=156697093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:58:0,120,1800:0,158,255:40,0 chr1 156697094 . A . PASS END=156697227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:36:0,90,1343:0,90,255:40,0 chr1 156697228 . T . PASS END=156697228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1284:0,65,255:34,0 chr1 156697229 . C . PASS END=156697429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:34:0,86,1231:0,86,255:40,0 chr1 156697430 . C . PASS END=156697430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:26,0 chr1 156697431 . A . PASS END=156697431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 156697432 . G . PASS END=156697437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:32:0,60,900:0,80,255:25,0 chr1 156697438 . T . PASS END=156697444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:51:24:0,51,765:0,67,255:19,0 chr1 156698897 . A . PASS END=156698904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 156698905 . C . PASS END=156698905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 156698906 . A . PASS END=156698912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:26,0 chr1 156698913 . C . PASS END=156698921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 156698922 . T . PASS END=156698922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 156698923 . C . PASS END=156698923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 156698924 . T . PASS END=156698924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:27,0 chr1 156698925 . C . PASS END=156698946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr1 156698947 . A . PASS END=156698969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,71,255:26,0 chr1 156698970 . T . PASS END=156698991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,637:0,50,255:19,0 chr1 156698992 . G . PASS END=156698992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 156698993 . G . PASS END=156698994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 156698995 . T . PASS END=156699004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,37,255:13,0 chr1 156699005 . A . PASS END=156699005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 156699006 . T . PASS END=156699007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 156701783 . G . PASS END=156701907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:38:0,94,1306:0,94,255:40,0 chr1 156702073 . G . PASS END=156702258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:30:0,84,1260:0,90,255:40,0 chr1 156702259 . G . PASS END=156702265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:34:0,72,1080:0,86,255:26,0 chr1 156702777 . T . PASS END=156702839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1152:0,81,255:39,0 chr1 156703169 . G . PASS END=156703172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156703173 . A . PASS END=156703174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156703175 . C . PASS END=156703175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 156703176 . T . PASS END=156703190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 156703191 . C . PASS END=156703191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:26,0 chr1 156703192 . T . PASS END=156703259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,964:0,84,255:34,0 chr1 156703260 . T . PASS END=156703299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 156703300 . G . PASS END=156703305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 156703306 . C . PASS END=156703306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr1 156703307 . C . PASS END=156703312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 156703801 . G . PASS END=156703823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,646:0,41,255:19,0 chr1 156703824 . C . PASS END=156703824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:20,0 chr1 156703825 . T . PASS END=156703829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,922:0,72,255:24,0 chr1 156703830 . A . PASS END=156703830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 156703831 . C . PASS END=156703843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,809:0,72,255:26,0 chr1 156703844 . G . PASS END=156703890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1047:0,81,255:38,0 chr1 156703891 . G . PASS END=156703891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 156703892 . A . PASS END=156703935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,92,255:36,0 chr1 156703936 . C . PASS END=156703936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:31,0 chr1 156703937 . A . PASS END=156703973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1133:0,80,255:33,0 chr1 156703974 . C . PASS END=156703974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 156703975 . T . PASS END=156703975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:26,0 chr1 156703976 . T . PASS END=156703976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156703977 . C . PASS END=156703982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156703983 . C . PASS END=156703995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:24,0 chr1 156703996 . G . PASS END=156703996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156703997 . T . PASS END=156703999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 156704000 . C . PASS END=156704000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr1 156704001 . C . PASS END=156704029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:25,0 chr1 156704030 . A . PASS END=156704030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 156704031 . G . PASS END=156704090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:26,0 chr1 156704091 . A . PASS END=156704091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:23,0 chr1 156704092 . C . PASS END=156704120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:26,0 chr1 156704121 . C . PASS END=156704125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 156704126 . C . PASS END=156704127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 156704128 . C . PASS END=156704134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr1 156704135 . A . PASS END=156704135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr1 156704136 . A . PASS END=156704145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 156704146 . C . PASS END=156704146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr1 156704147 . G . PASS END=156704150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156704151 . A . PASS END=156704152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156704153 . A . PASS END=156704153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:25,0 chr1 156704154 . G . PASS END=156704154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156704155 . A . PASS END=156704156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 156704157 . A . PASS END=156704180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr1 156704181 . C . PASS END=156704183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 156704184 . C . PASS END=156704184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 156704185 . T . PASS END=156704188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,83,255:25,0 chr1 156704189 . G . PASS END=156704192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:29,0 chr1 156704193 . A . PASS END=156704193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr1 156704194 . G . PASS END=156704197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 156704198 . T . PASS END=156704198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 156704199 . G . PASS END=156704206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:32,0 chr1 156704207 . T . PASS END=156704207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr1 156704208 . C . PASS END=156704228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr1 156704229 . G . PASS END=156704229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1070:0,41,255:30,0 chr1 156704230 . C . PASS END=156704234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:31,0 chr1 156704235 . T . PASS END=156704235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 156704236 . C . PASS END=156704238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156704239 . C . PASS END=156704239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 156704240 . C . PASS END=156704244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 156704245 . G . PASS END=156704245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 156704246 . T . PASS END=156704246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156704247 . G . PASS END=156704258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,68,255:26,0 chr1 156704259 . C . PASS END=156704267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:56:24:0,56,845:0,56,255:19,0 chr1 156704268 . C . PASS END=156704268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:18,0 chr1 156704269 . G . PASS END=156704273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,690:0,44,255:18,0 chr1 156704274 . C . PASS END=156704275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 156704276 . A . PASS END=156704278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 156704279 . T . PASS END=156704279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:21:0,42,630:0,46,255:13,0 chr1 156704280 . T . PASS END=156704280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 156704281 . G . PASS END=156704281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,582:0,27,255:13,0 chr1 156704282 . A . PASS END=156704282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 156704283 . A . PASS END=156704285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:34:17:0,34,491:0,34,255:12,0 chr1 156705517 . A . PASS END=156705545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 156705546 . G . PASS END=156705555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,988:0,84,255:31,0 chr1 156705556 . C . PASS END=156705592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1172:0,86,255:34,0 chr1 156705593 . G C, 154.89 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1359,108,1359:255,108,0:0,0:1.5489e+02,1.0489e+02,0.0000e+00,4.5000e+02,1.3966e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,17:0,0,21,15 chr1 156705594 . T . PASS END=156705630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:36:0,85,1482:0,85,255:40,0 chr1 156705631 . G . PASS END=156705684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,97,255:39,0 chr1 156705685 . G . PASS END=156705685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:28,0 chr1 156705686 . T . PASS END=156705697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 156705698 . C . PASS END=156705701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 156706411 . C . PASS END=156706521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,128,255:40,0 chr1 156706522 . G . PASS END=156706555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,114,1710:0,122,255:40,0 chr1 156707190 . T . PASS END=156707326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:40:0,94,1575:0,94,255:40,0 chr1 156707438 . C . PASS END=156707531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:89:41:0,89,1472:0,89,255:40,0 chr1 156707532 . T . PASS END=156707532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:37,0 chr1 156707533 . G . PASS END=156707554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1194:0,83,255:37,0 chr1 156707555 . T . PASS END=156707555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1073:0,60,255:29,0 chr1 156707556 . C . PASS END=156707556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 156707557 . T . PASS END=156707557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:29,0 chr1 156707558 . C . PASS END=156707561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 156707562 . G . PASS END=156707562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 156707563 . G . PASS END=156707564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156707565 . T . PASS END=156707568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 156707823 . C . PASS END=156707926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:32:0,87,1305:0,92,255:40,0 chr1 156708135 . T . PASS END=156708135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 156708136 . G . PASS END=156708138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156708139 . T . PASS END=156708142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 156708143 . G . PASS END=156708143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156708144 . C . PASS END=156708144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr1 156708145 . C . PASS END=156708146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 156708147 . T . PASS END=156708147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1156:0,50,255:33,0 chr1 156708148 . C . PASS END=156708206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:34:0,88,1197:0,88,255:40,0 chr1 156708207 . A . PASS END=156708230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1235:0,86,255:34,0 chr1 156708314 . C . PASS END=156708321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:29,0 chr1 156708322 . C . PASS END=156708322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 156708323 . A . PASS END=156708350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 156708351 . A . PASS END=156708351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:29,0 chr1 156708352 . T . PASS END=156708359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 156708360 . A . PASS END=156708360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 156708361 . C . PASS END=156708365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 156708366 . A . PASS END=156708366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:27,0 chr1 156708367 . C . PASS END=156708368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 156708369 . G . PASS END=156708369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 156708370 . G . PASS END=156708372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156708373 . G . PASS END=156708385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,848:0,61,255:26,0 chr1 156708386 . T . PASS END=156708386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 156708387 . G . PASS END=156708402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,908:0,61,255:23,0 chr1 156708403 . T . PASS END=156708403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156708404 . G . PASS END=156708412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 156708413 . A . PASS END=156708440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,43,255:19,0 chr1 156708441 . T . PASS END=156708441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:15,0 chr1 156708442 . A . PASS END=156708442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:15,0 chr1 156708443 . A . PASS END=156708443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 156708444 . T . PASS END=156708466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 156708467 . T . PASS END=156708473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,520:0,31,255:13,0 chr1 156708474 . G . PASS END=156708478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156708479 . C . PASS END=156708496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 156713241 . C . LowGQ END=156713241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 156713242 . T . PASS END=156713244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 156713245 . A . PASS END=156713245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 156713246 . G . PASS END=156713247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 156713444 . C . PASS END=156713453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 156713454 . C . PASS END=156713474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 156713475 . C . PASS END=156713480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 156713481 . C . PASS END=156713481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 156713482 . C . PASS END=156713483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:25,0 chr1 156713484 . T . PASS END=156713484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 156713485 . G . PASS END=156713511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,890:0,62,255:25,0 chr1 156713512 . C T, 118.32 PASS DP=24;MQ=244.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,15,0:0,9,0:68:156,71,0,871,71,871:255,72,0:0,0:1.1832e+02,6.8318e+01,5.1772e-07,4.5000e+02,1.0309e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,9:0,0,12,12 chr1 156713513 . T . PASS END=156713534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:24,0 chr1 156713535 . C . PASS END=156713535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 156713536 . C . PASS END=156713549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1008:0,68,255:26,0 chr1 156713550 . G . PASS END=156713560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 156713561 . G . PASS END=156713563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156713564 . C . PASS END=156713564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 156713565 . T . PASS END=156713569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 156713570 . T . PASS END=156713570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1024:0,46,255:29,0 chr1 156713571 . T . PASS END=156713579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1172:0,93,255:31,0 chr1 156713580 . C . PASS END=156713580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:31,0 chr1 156713581 . C . PASS END=156713623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1127:0,82,255:34,0 chr1 156713624 . T . PASS END=156713624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:26,0 chr1 156713625 . C . PASS END=156713658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,987:0,84,255:29,0 chr1 156713659 . T . PASS END=156713659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,865:0,70,255:27,0 chr1 156713660 . T . PASS END=156713662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 156713663 . G . PASS END=156713663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 156713664 . G . PASS END=156713665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156713666 . G . PASS END=156713670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,70,255:21,0 chr1 156713955 . C . PASS END=156714161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:32:0,96,1150:0,96,255:40,0 chr1 156714800 . C . PASS END=156714938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:88:39:0,88,1465:0,88,255:40,0 chr1 156715089 . G . PASS END=156715098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:24,0 chr1 156715099 . T . PASS END=156715099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:23,0 chr1 156715100 . C . PASS END=156715103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,833:0,61,255:25,2 chr1 156715104 . A . PASS END=156715104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:26,0 chr1 156715105 . A . PASS END=156715132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 156715133 . T . PASS END=156715133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 156715134 . G . PASS END=156715134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156715135 . A . PASS END=156715135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 156715136 . T . PASS END=156715137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156715138 . T . PASS END=156715138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 156715139 . C . PASS END=156715154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 156715155 . A . PASS END=156715156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr1 156715157 . C . PASS END=156715160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156715161 . T . PASS END=156715161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156715162 . C . PASS END=156715165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156721135 . C . PASS END=156721136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 156721137 . G . PASS END=156721144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr1 156721145 . C . PASS END=156721145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 156721146 . A . PASS END=156721146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 156721147 . G . PASS END=156721147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 156721148 . T . PASS END=156721153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 156721154 . T . PASS END=156721154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 156721155 . A . PASS END=156721162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 156721163 . A . PASS END=156721163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:22,0 chr1 156721164 . T . PASS END=156721183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,787:0,72,255:24,0 chr1 156721184 . C . PASS END=156721194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 156721195 . C . PASS END=156721195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156721196 . T . PASS END=156721196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156721197 . C . PASS END=156721204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 156721205 . C . PASS END=156721205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 156721206 . G . PASS END=156721216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 156721217 . G . PASS END=156721217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:19,0 chr1 156721218 . A . PASS END=156721220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156721221 . T . PASS END=156721221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 156721830 . C . PASS END=156721861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,605:0,54,255:19,0 chr1 156721862 . T . PASS END=156721867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156721868 . C . PASS END=156721868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 156721869 . A . PASS END=156721875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156721876 . C . PASS END=156721895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,665:0,41,255:17,0 chr1 156722021 . C . PASS END=156722034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 156722035 . C . PASS END=156722043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 156722044 . C . PASS END=156722044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 156722045 . G . PASS END=156722053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 156722054 . T . PASS END=156722054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 156722055 . T . PASS END=156722064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1058:0,87,255:31,0 chr1 156722065 . G . PASS END=156722065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr1 156722066 . T . PASS END=156722070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr1 156722071 . C . PASS END=156722073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1020:0,63,255:31,0 chr1 156722074 . T . PASS END=156722088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr1 156722089 . G . PASS END=156722089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 156722090 . C . PASS END=156722090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156722091 . T . PASS END=156722092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:28,0 chr1 156722093 . G . PASS END=156722095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156722096 . T . PASS END=156722096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,962:0,60,255:27,0 chr1 156722097 . T . PASS END=156722097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:28,0 chr1 156722098 . T . PASS END=156722101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 156722102 . A . PASS END=156722102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156722103 . G . PASS END=156722103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 156722104 . C . PASS END=156722105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 156722106 . A . PASS END=156722106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156722107 . G . PASS END=156722108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 156722109 . A . PASS END=156722109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156722110 . G . PASS END=156722110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:26,0 chr1 156722111 . A . PASS END=156722111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156722112 . T . PASS END=156722112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 156722113 . G . PASS END=156722113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156722114 . G . PASS END=156722115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 156722116 . C . PASS END=156722116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:24,0 chr1 156722117 . A . PASS END=156722122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 156722123 . T . PASS END=156722123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,837:0,34,255:23,0 chr1 156722124 . T . PASS END=156722124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156722125 . G . PASS END=156722125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156722126 . A . PASS END=156722139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:26,0 chr1 156722140 . C . PASS END=156722148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,61,255:19,0 chr1 156722149 . G . PASS END=156722154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156722155 . T . PASS END=156722155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 156737564 . A . PASS END=156737596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr1 156737597 . A . PASS END=156737597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:16,0 chr1 156737598 . G . PASS END=156737604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 156737605 . G . PASS END=156737608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156737609 . G . PASS END=156737610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156737611 . G . PASS END=156737624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 156737625 . C . PASS END=156737626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156737627 . G . PASS END=156737644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:21,0 chr1 156737645 . G . PASS END=156737648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156737649 . C . PASS END=156737649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156737650 . T . PASS END=156737662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,53,255:19,0 chr1 156737663 . G . PASS END=156737669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156737670 . G . PASS END=156737721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,668:0,43,255:19,0 chr1 156737722 . G . PASS END=156737722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr1 156737723 . C . PASS END=156737730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,562:0,40,255:18,0 chr1 156737731 . G . PASS END=156737731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,541:0,24,255:15,0 chr1 156737732 . A . PASS END=156737732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,526:0,7,255:14,0 chr1 156737733 . T . PASS END=156737734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,532:0,40,255:17,0 chr1 156737735 . C . PASS END=156737735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 156737736 . T . PASS END=156737736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:15,0 chr1 156737737 . G . PASS END=156737737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 156737738 . G . PASS END=156737742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,576:0,40,255:18,0 chr1 156737743 . A . PASS END=156737743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:17,0 chr1 156737744 . G . PASS END=156737754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,564:0,43,255:18,0 chr1 156737755 . G . LowGQ END=156737755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,443:21,0,255:16,0 chr1 156737756 . C . PASS END=156737757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 156737758 . G . PASS END=156737758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,566:0,5,255:16,0 chr1 156737759 . C . PASS END=156737759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 156737760 . T . LowGQ END=156737760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,466:12,0,255:16,0 chr1 156737761 . G . PASS END=156737766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:18,0 chr1 156737767 . T . PASS END=156737767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,578:0,26,255:15,0 chr1 156737768 . C . LowGQ END=156737768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,433:32,0,255:12,0 chr1 156737769 . C . PASS END=156737769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 156737770 . C . PASS END=156737770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:15,0 chr1 156737771 . C . PASS END=156737772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 156737773 . A . PASS END=156737773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:14,0 chr1 156737774 . C . PASS END=156737775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,562:0,40,255:15,0 chr1 156737776 . C . PASS END=156737776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:15,0 chr1 156737777 . A . PASS END=156737777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:15,0 chr1 156737778 . C . PASS END=156737783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,509:0,48,255:16,0 chr1 156737784 . A . LowGQ END=156737784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,416:2,0,255:13,0 chr1 156737785 . C . PASS END=156737785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 156737786 . C . PASS END=156737789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156737790 . G . PASS END=156737790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,462:0,17,255:14,0 chr1 156737791 . G . PASS END=156737792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156737793 . T . PASS END=156737793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,462:0,17,255:14,0 chr1 156737794 . T . PASS END=156737794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156737795 . C . PASS END=156737796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,463:0,15,255:13,0 chr1 156737797 . G . PASS END=156737800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156737801 . C . PASS END=156737801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:16,0 chr1 156737802 . C . PASS END=156737803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 156737804 . C . PASS END=156737804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 156737805 . C . PASS END=156737809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 156737810 . T . PASS END=156737810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,552:0,27,255:16,0 chr1 156737811 . T . PASS END=156737815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,615:0,43,255:18,0 chr1 156737816 . T . PASS END=156737816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 156737817 . T . PASS END=156737826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:18,0 chr1 156737827 . A . PASS END=156737828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,620:0,21,255:19,0 chr1 156737829 . G . PASS END=156737845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 156737846 . G . PASS END=156737846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,549:0,10,255:16,0 chr1 156737847 . G . PASS END=156737856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,668:0,46,255:19,0 chr1 156737857 . G . PASS END=156737892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,686:0,60,255:23,0 chr1 156737893 . G . PASS END=156737893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 156737894 . G . PASS END=156737897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156737898 . T . PASS END=156737910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 156737911 . A . PASS END=156737916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 156737917 . T . PASS END=156737931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr1 156737932 . C . PASS END=156737954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 156737955 . C . PASS END=156737955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 156737956 . C . PASS END=156737968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 156737969 . C T, 47.11 PASS DP=19;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=0.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:5,5,0:7,2,0:46:82,0,50,250,424,674:214,0,255:10,0:4.7110e+01,1.0613e-04,5.3000e+01,2.5041e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,2,5:4,8,4,3 chr1 156737970 . C . PASS END=156738005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:18,0 chr1 156738006 . C . PASS END=156738006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 156738007 . G . PASS END=156738011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 156738012 . C . PASS END=156738021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr1 156738022 . T . PASS END=156738031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:10:0,21,315:0,30,255:9,0 chr1 156752074 . T . PASS END=156752085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:93:0,120,1800:0,255,255:40,0 chr1 156752086 . G . PASS END=156752121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:88:0,120,1800:0,217,255:40,0 chr1 156756400 . G . PASS END=156756400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 156756401 . G . PASS END=156756403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156756404 . C . PASS END=156756404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156756405 . C . PASS END=156756558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1147:0,80,255:40,0 chr1 156756559 . A . PASS END=156756559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1078:0,65,255:28,0 chr1 156756560 . C . PASS END=156756563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 156756564 . C . PASS END=156756564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 156756565 . T . PASS END=156756580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr1 156756581 . T . PASS END=156756581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 156756582 . G . PASS END=156756582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156756583 . G . PASS END=156756583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 156756584 . G . PASS END=156756601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:31,0 chr1 156756602 . C . PASS END=156756602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 156756603 . G . PASS END=156756603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156756604 . T . PASS END=156756604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156756605 . C . PASS END=156756609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 156756610 . T . PASS END=156756610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:26,0 chr1 156756611 . C . PASS END=156756614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:30,0 chr1 156756615 . T . PASS END=156756616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 156756617 . T . PASS END=156756620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 156756621 . G . PASS END=156756621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 156756622 . G . PASS END=156756623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156756624 . T . PASS END=156756626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr1 156756627 . T . PASS END=156756627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr1 156756628 . G . PASS END=156756634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1047:0,74,255:26,0 chr1 156756635 . G . PASS END=156756637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156756638 . C . PASS END=156756639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 156756640 . G . PASS END=156756640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156756641 . C . PASS END=156756641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:25,0 chr1 156756642 . C . PASS END=156756644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 156756645 . G . PASS END=156756646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156756647 . A . PASS END=156756647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 156756648 . G . PASS END=156756649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 156756650 . T . PASS END=156756650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 156756651 . G . PASS END=156756653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156756654 . A . PASS END=156756654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 156756655 . A . PASS END=156756662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:28,0 chr1 156756663 . C . PASS END=156756665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156756666 . G . PASS END=156756666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 156756667 . C . PASS END=156756670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156756671 . A . PASS END=156756671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 156756672 . A . PASS END=156756676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 156756677 . A . PASS END=156756677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 156756678 . C . PASS END=156756752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1163:0,80,255:35,0 chr1 156756753 . A . PASS END=156756755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:25,0 chr1 156756756 . C . PASS END=156756806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:29,0 chr1 156756807 . A . PASS END=156756807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 156756808 . G . PASS END=156756808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156756809 . A . PASS END=156756809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 156756810 . G . PASS END=156756845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1147:0,80,255:31,0 chr1 156756846 . T . PASS END=156756846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 156756847 . G . PASS END=156756848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr1 156756849 . A . PASS END=156756850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1034:0,69,255:31,0 chr1 156756851 . T . PASS END=156756869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1148:0,83,255:35,0 chr1 156756870 . A . PASS END=156756870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1191:0,77,255:33,0 chr1 156756871 . A . PASS END=156756882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1282:0,92,255:35,0 chr1 156756883 . T . PASS END=156756883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:31,0 chr1 156756884 . G . PASS END=156756884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 156756885 . G . PASS END=156756885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:31,0 chr1 156756886 . A . PASS END=156756918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1258:0,90,255:34,0 chr1 156756919 . C . PASS END=156756919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 156756920 . A . PASS END=156756920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156756921 . G . PASS END=156756921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 156756922 . T . PASS END=156756923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156756924 . T . PASS END=156756924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 156756925 . T . PASS END=156756930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156756931 . T . PASS END=156756948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,914:0,62,255:26,0 chr1 156756949 . G . PASS END=156756949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 156756950 . C . PASS END=156756955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156756956 . C . PASS END=156756956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr1 156756957 . T . PASS END=156756958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 156756959 . A . PASS END=156756959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,764:0,55,255:23,0 chr1 156756960 . T . PASS END=156756962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:24,0 chr1 156756963 . T . PASS END=156756963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 156756964 . C . PASS END=156756966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 156760859 . G . PASS END=156760897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1241:0,99,255:40,0 chr1 156760898 . A . PASS END=156760898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1401:0,51,255:38,0 chr1 156760899 . T . PASS END=156760954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1307:0,90,255:40,0 chr1 156761045 . G . PASS END=156761085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1056:0,87,255:32,0 chr1 156761086 . C . PASS END=156761086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:28,0 chr1 156761087 . T . PASS END=156761098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 156761099 . C . PASS END=156761099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 156761100 . T . PASS END=156761108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 156761109 . A . PASS END=156761109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 156761110 . G . PASS END=156761110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 156761489 . G . PASS END=156761492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 156761493 . A . PASS END=156761513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:18,0 chr1 156761514 . C . PASS END=156761535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:25,0 chr1 156761536 . C . PASS END=156761536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 156761537 . C . PASS END=156761546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,811:0,61,255:26,0 chr1 156761547 . A . PASS END=156761547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:24,0 chr1 156761548 . A . PASS END=156761579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 156761580 . A . PASS END=156761580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 156761581 . A . PASS END=156761584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 156764457 . T . PASS END=156764467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,887:0,62,255:26,0 chr1 156764468 . G . PASS END=156764468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 156764469 . C . PASS END=156764470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156764471 . G . PASS END=156764543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1101:0,80,255:33,0 chr1 156764544 . C . PASS END=156764558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,78,255:26,0 chr1 156764559 . A . PASS END=156764559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:20,0 chr1 156764560 . A . PASS END=156764560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 156764561 . G . PASS END=156764563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 156764564 . A . PASS END=156764588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,537:0,44,255:19,0 chr1 156764589 . T . PASS END=156764590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156764591 . A . PASS END=156764600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 156767068 . A . PASS END=156767109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:34:0,90,1260:0,94,255:40,0 chr1 156767110 . C . PASS END=156767110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1590:0,77,255:40,0 chr1 156767111 . A . PASS END=156767133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:41:0,91,1346:0,91,255:40,0 chr1 156770166 . G . PASS END=156770252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:37:0,85,1360:0,85,255:40,0 chr1 156776970 . C . PASS END=156776973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 156776974 . T . PASS END=156776974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,435:0,15,255:13,0 chr1 156776975 . G . PASS END=156776975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 156776976 . A . PASS END=156776976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:13,0 chr1 156776977 . G . PASS END=156776985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,613:0,48,255:17,0 chr1 156776986 . A . PASS END=156776986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:16,0 chr1 156776987 . G . PASS END=156776989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 156776990 . G . PASS END=156776990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,529:0,24,255:17,0 chr1 156776991 . A . PASS END=156776991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 156776992 . A . PASS END=156776993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:21:20:0,21,620:0,21,255:19,0 chr1 156776994 . C . PASS END=156776997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:21,0 chr1 156776998 . G . PASS END=156776998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 156776999 . C . PASS END=156776999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156777000 . C . PASS END=156777001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,676:0,33,255:19,0 chr1 156777002 . G . PASS END=156777004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156777005 . C . PASS END=156777005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 156777006 . T . PASS END=156777008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156777009 . G . PASS END=156777009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 156777010 . T . PASS END=156777013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,817:0,66,255:24,0 chr1 156777014 . G . PASS END=156777014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 156777015 . A . PASS END=156777020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,787:0,72,255:24,0 chr1 156777021 . C . PASS END=156777021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 156777022 . T . PASS END=156777025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156777026 . T . PASS END=156777026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr1 156777027 . A . PASS END=156777030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 156777031 . A . PASS END=156777033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:22,0 chr1 156777034 . T . PASS END=156777036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 156777037 . T . PASS END=156777037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,686:0,38,255:20,0 chr1 156777038 . G . PASS END=156777047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,833:0,61,255:22,0 chr1 156777048 . G . PASS END=156777048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,717:0,41,255:18,0 chr1 156777049 . T . PASS END=156777049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 156777050 . G . PASS END=156777052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:25:0,41,687:0,41,255:19,0 chr1 156777053 . T . PASS END=156777055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 156777056 . A . PASS END=156777057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,611:0,49,255:19,0 chr1 156777058 . G . PASS END=156777058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156777059 . C . PASS END=156777059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,570:0,29,255:18,0 chr1 156777060 . G . PASS END=156777062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156777063 . T . PASS END=156777063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:19,0 chr1 156777064 . G . PASS END=156777068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156777069 . C . PASS END=156777069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,542:0,46,255:19,0 chr1 156777070 . T . PASS END=156777072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156777073 . T . PASS END=156777106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,712:0,44,255:19,0 chr1 156777107 . T . PASS END=156777107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr1 156777108 . C . PASS END=156777115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 156777116 . G . PASS END=156777116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 156777117 . C . PASS END=156777123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156777124 . G . PASS END=156777130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 156777131 . C . PASS END=156777137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,405:0,26,255:10,0 chr1 156778995 . C . PASS END=156779000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 156779001 . T . PASS END=156779011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:19,0 chr1 156779012 . G . PASS END=156779034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:22,0 chr1 156779035 . A . PASS END=156779038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,751:0,50,255:20,0 chr1 156779039 . G . PASS END=156779072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr1 156779073 . C . PASS END=156779108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,47,255:19,0 chr1 156779109 . G . PASS END=156779120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 156779121 . C . PASS END=156779121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 156779122 . A . PASS END=156779122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 156779123 . T . PASS END=156779123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 156779124 . G . PASS END=156779137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 156779138 . T . PASS END=156779138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 156779139 . G . PASS END=156779150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:12,0 chr1 156779151 . C . PASS END=156779161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:12:0,22,360:0,22,255:9,0 chr1 156779162 . T . PASS END=156779165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 156779166 . A . PASS END=156779176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 156779177 . T . PASS END=156779177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 156779178 . G . PASS END=156779182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 156779183 . G . PASS END=156779183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 156779184 . T . PASS END=156779195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 156779196 . G . PASS END=156779196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 156779197 . T . PASS END=156779197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 156779198 . G . PASS END=156779216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 156779217 . G . PASS END=156779217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 156779218 . T . PASS END=156779223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 156779224 . T . PASS END=156779224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 156779225 . C . PASS END=156779231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr1 156779232 . C . PASS END=156779271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:12,0 chr1 156779272 . A . PASS END=156779272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 156779273 . G . PASS END=156779282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 156779453 . C . PASS END=156779463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1080:0,90,255:30,0 chr1 156779464 . C . PASS END=156779464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 156779465 . G . PASS END=156779516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:30:0,83,1150:0,83,255:40,0 chr1 156779517 . C . PASS END=156779518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:71:42:0,71,1429:0,71,255:38,0 chr1 156779519 . G . PASS END=156779593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:37:0,84,1328:0,84,255:40,0 chr1 156779594 . A . PASS END=156779594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:28,0 chr1 156779595 . G . PASS END=156779596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 156779597 . A . PASS END=156779597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:29,0 chr1 156779598 . G . PASS END=156779598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:31,0 chr1 156779599 . T . PASS END=156779599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:14:34:0,14,1059:0,14,255:29,0 chr1 156783640 . C . PASS END=156783654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr1 156783655 . C . PASS END=156783655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 156783656 . T . PASS END=156783671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,495:0,48,255:18,0 chr1 156783672 . C . PASS END=156783707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,762:0,63,255:25,0 chr1 156783708 . G . PASS END=156783708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 156783709 . C . PASS END=156783718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156783719 . A . PASS END=156783730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156783731 . G . PASS END=156783732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156783733 . G . PASS END=156783763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr1 156783764 . T . PASS END=156783764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:18,0 chr1 156783765 . C . PASS END=156783765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156783766 . C . PASS END=156783768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156783769 . G . PASS END=156783783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 156783784 . G . PASS END=156783808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,714:0,57,255:19,0 chr1 156783997 . C . PASS END=156783999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 156784000 . T . PASS END=156784000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 156784001 . A . PASS END=156784007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 156784008 . C . PASS END=156784008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 156784009 . A . PASS END=156784016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,724:0,66,255:23,0 chr1 156784017 . C . PASS END=156784017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 156784018 . A . PASS END=156784020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:23,0 chr1 156784021 . G . PASS END=156784021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 156784022 . C . PASS END=156784039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,978:0,69,255:26,0 chr1 156784040 . C . PASS END=156784042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156784043 . A . PASS END=156784043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 156784044 . G . PASS END=156784061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1153:0,80,255:32,0 chr1 156784062 . G . PASS END=156784062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 156784063 . G . PASS END=156784081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1089:0,93,255:32,0 chr1 156784082 . C . PASS END=156784082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:31,0 chr1 156784083 . C . PASS END=156784093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:31,0 chr1 156784094 . T . PASS END=156784094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 156784095 . G . PASS END=156784103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 156784104 . A . PASS END=156784104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 156784105 . G . PASS END=156784106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156784107 . G . PASS END=156784116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1108:0,74,255:25,0 chr1 156784829 . C . PASS END=156784848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,659:0,41,255:19,0 chr1 156784849 . G . PASS END=156784893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:25,0 chr1 156784894 . G . PASS END=156784894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 156784895 . G . PASS END=156784897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 156784898 . T . PASS END=156784899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,891:0,64,255:26,0 chr1 156784900 . C . PASS END=156784900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 156784901 . T . PASS END=156784944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr1 156784945 . T . PASS END=156784951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 156784952 . A . PASS END=156784952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 156784953 . C . PASS END=156784958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 156784959 . C . PASS END=156784960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:24:0,36,811:0,36,255:21,1 chr1 156784961 . G . PASS END=156784961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 156784962 . C . PASS END=156784975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 156784976 . C . PASS END=156784981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 156784982 . T C, 49.63 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=1.216;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,9,0:0.450,0.000:20:3,5,0:8,4,0:48:84,0,50,293,336,629:255,0,255:10,0:4.9631e+01,6.9116e-05,5.3000e+01,2.9311e+02,3.7060e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,4,5:7,4,4,5 chr1 156784983 . T . PASS END=156784989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:17,0 chr1 156784990 . A . PASS END=156785005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:14:0,36,540:0,42,255:13,0 chr1 156785006 . G . PASS END=156785013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 156785622 . A . PASS END=156785629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,169,255:40,0 chr1 156785630 . G . PASS END=156785630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:71:56:0,71,1759:0,71,255:40,0 chr1 156785798 . C . PASS END=156785818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,117,1621:0,119,255:40,0 chr1 156785819 . G . PASS END=156785904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:92:39:0,92,1354:0,92,255:40,0 chr1 156786467 . C . PASS END=156786468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:29,0 chr1 156786469 . T . PASS END=156786492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:32,0 chr1 156786493 . A . PASS END=156786493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr1 156786494 . A . PASS END=156786500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 156810665 . T . PASS END=156810691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 156810692 . G . PASS END=156810692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156810693 . C . PASS END=156810698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 156810699 . T . PASS END=156810699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 156810700 . C . PASS END=156810769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,792:0,62,255:26,0 chr1 156810770 . C . PASS END=156810770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 156810771 . G . PASS END=156810792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,65,255:24,0 chr1 156810793 . G . PASS END=156810794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:21,0 chr1 156810795 . C . PASS END=156810841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,886:0,61,255:23,0 chr1 156810842 . G . PASS END=156810842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 156810843 . A . PASS END=156810858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 156810859 . G . PASS END=156810861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156810862 . G . PASS END=156810863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156810864 . T . PASS END=156810865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,684:0,46,255:19,0 chr1 156810866 . C . PASS END=156810874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156810875 . G . PASS END=156810896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,647:0,41,255:19,0 chr1 156811186 . A . PASS END=156811320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:39:0,90,1418:0,90,255:40,0 chr1 156811457 . C . PASS END=156811465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 156811466 . G . PASS END=156811467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:29,0 chr1 156811468 . G . PASS END=156811472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 156811473 . T . PASS END=156811473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 156811474 . G . PASS END=156811479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 156811480 . G . PASS END=156811481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,938:0,65,255:30,0 chr1 156811482 . T . PASS END=156811483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1139:0,90,255:31,0 chr1 156811484 . C . PASS END=156811484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:30,0 chr1 156811485 . C . PASS END=156811486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr1 156811487 . T . PASS END=156811488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 156811489 . T . PASS END=156811508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1125:0,80,255:34,0 chr1 156811509 . T . PASS END=156811509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 156811510 . C . PASS END=156811520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1135:0,85,255:34,0 chr1 156811521 . G . PASS END=156811521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 156811522 . C . PASS END=156811554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:34,0 chr1 156811555 . T . PASS END=156811581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 156811582 . G . PASS END=156811586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,677:0,49,255:19,0 chr1 156811873 . G . PASS END=156812063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:33:0,84,1249:0,99,255:40,0 chr1 156812190 . C . PASS END=156812229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1194:0,86,255:34,0 chr1 156812230 . T . PASS END=156812231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1224:0,69,255:30,1 chr1 156812232 . C . PASS END=156812244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,96,255:31,0 chr1 156812245 . A . PASS END=156812245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:29,0 chr1 156812246 . A . PASS END=156812253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1133:0,90,255:31,0 chr1 156812254 . A . PASS END=156812254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:29,0 chr1 156812255 . T . PASS END=156812263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 156812264 . T . PASS END=156812264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:28,0 chr1 156812265 . T . PASS END=156812273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 156812274 . C . PASS END=156812274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 156812275 . T . PASS END=156812275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:22,0 chr1 156812276 . G . PASS END=156812289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:23,0 chr1 156812290 . A . PASS END=156812290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 156812291 . G . PASS END=156812295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 156812296 . C . PASS END=156812300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 156812796 . C . PASS END=156813025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:37:0,94,1236:0,94,255:40,0 chr1 156813219 . T . PASS END=156813271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,129,255:40,0 chr1 156813967 . C . PASS END=156813996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,972:0,80,255:34,0 chr1 156813997 . G . PASS END=156813997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1180:0,50,255:32,0 chr1 156813998 . C . PASS END=156814062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1188:0,85,255:40,0 chr1 156814063 . T . PASS END=156814063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1117:0,55,255:31,0 chr1 156814064 . C . PASS END=156814072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:33,0 chr1 156814254 . C . PASS END=156814258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:29,0 chr1 156814259 . C . PASS END=156814259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 156814260 . C . PASS END=156814265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1033:0,87,255:31,0 chr1 156814266 . T . PASS END=156814266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 156814267 . G . PASS END=156814270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 156814271 . A . PASS END=156814271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 156814272 . A . PASS END=156814282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:36,0 chr1 156814283 . T . PASS END=156814283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1193:0,78,255:35,0 chr1 156814284 . C . PASS END=156814284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 156814285 . T . PASS END=156814285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:34,0 chr1 156814286 . G . PASS END=156814394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:35:0,87,1305:0,87,255:40,2 chr1 156814395 . A . PASS END=156814401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1035:0,99,255:26,0 chr1 156814402 . C . PASS END=156814415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:51:20:0,51,765:0,60,255:18,0 chr1 156814416 . C . PASS END=156814416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156814499 . C . PASS END=156814586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1196:0,85,255:37,0 chr1 156814587 . T . PASS END=156814587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 156814588 . T . PASS END=156814591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:27,0 chr1 156814592 . G . PASS END=156814612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:27,0 chr1 156814613 . T . PASS END=156814615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 156814616 . T . PASS END=156814616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:17,0 chr1 156814617 . G . PASS END=156814631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 156814632 . T . PASS END=156814635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,43,255:13,0 chr1 156814868 . T . PASS END=156814897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1268:0,91,255:36,0 chr1 156814898 . T . PASS END=156814898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 156814899 . G . PASS END=156814902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1260:0,89,255:35,0 chr1 156814903 . G . PASS END=156814903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1141:0,50,255:33,0 chr1 156814904 . C . PASS END=156815069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,84,255:40,0 chr1 156815070 . G . PASS END=156815070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 156815071 . C . PASS END=156815088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:31,0 chr1 156815164 . C . PASS END=156815205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1125:0,93,255:36,0 chr1 156815411 . A . PASS END=156815416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1372:0,87,255:39,0 chr1 156815417 . A . PASS END=156815417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1341:0,73,255:38,0 chr1 156815418 . T . PASS END=156815423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1425:0,90,255:40,0 chr1 156815424 . T . PASS END=156815424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1457:0,68,255:38,0 chr1 156815425 . C . PASS END=156815425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1319:0,59,255:37,0 chr1 156815426 . G . PASS END=156815434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1405:0,104,255:39,0 chr1 156815435 . A . PASS END=156815435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1373:0,73,255:36,0 chr1 156815436 . G . PASS END=156815436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 156815437 . A . PASS END=156815437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1238:0,70,255:35,0 chr1 156815438 . A . PASS END=156815469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1289:0,81,255:37,0 chr1 156815470 . T . PASS END=156815470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:34,0 chr1 156815471 . T . PASS END=156815542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1140:0,82,255:37,0 chr1 156815543 . G . PASS END=156815559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:61:26:0,61,892:0,61,255:26,0 chr1 156815560 . T . PASS END=156815560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,876:0,39,255:23,0 chr1 156815561 . T . PASS END=156815562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:24,0 chr1 156815563 . G . PASS END=156815563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 156815564 . C . PASS END=156815606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:25,0 chr1 156815744 . C . PASS END=156815748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 156815749 . T . PASS END=156815751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156815752 . C . PASS END=156815752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:19,0 chr1 156815753 . A . PASS END=156815758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 156815759 . C . PASS END=156815759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 156815760 . A . PASS END=156815778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,686:0,60,255:22,0 chr1 156815779 . T . PASS END=156815785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 156815786 . C . PASS END=156815793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:20,0 chr1 156815794 . T . PASS END=156815800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 156815801 . G . PASS END=156815803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 156815804 . C . PASS END=156815805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,759:0,50,255:20,0 chr1 156815806 . A . PASS END=156815828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:26,0 chr1 156815829 . G . PASS END=156815830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156815831 . G . PASS END=156815831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:28,0 chr1 156815832 . C . PASS END=156815891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1097:0,80,255:36,0 chr1 156815892 . G . PASS END=156815893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:28,0 chr1 156815894 . C . PASS END=156815902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 156815903 . C . PASS END=156815909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156815910 . A . PASS END=156815911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156816311 . C . PASS END=156816313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 156816314 . C . PASS END=156816314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 156816315 . A . PASS END=156816333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:17,0 chr1 156816334 . A . PASS END=156816334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:16,0 chr1 156816335 . C . PASS END=156816351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr1 156816352 . C . PASS END=156816353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156816354 . T . PASS END=156816355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156816356 . G . PASS END=156816359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156816360 . A . PASS END=156816360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 156816361 . G . PASS END=156816362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156816363 . G . PASS END=156816365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 156816366 . G . PASS END=156816374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156816375 . A . PASS END=156816377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 156816378 . G . PASS END=156816394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,861:0,69,255:25,0 chr1 156816395 . G . PASS END=156816395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 156816396 . C . PASS END=156816431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 156816432 . G . PASS END=156816435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 156816436 . A . PASS END=156816437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 156816438 . G . PASS END=156816439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156816440 . T . PASS END=156816440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 156816441 . C . PASS END=156816441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156816442 . A . PASS END=156816442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 156816443 . C . PASS END=156816450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 156816451 . T . PASS END=156816451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 156816452 . C . PASS END=156816457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr1 156816458 . T . PASS END=156816458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 156816459 . G . PASS END=156816476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1105:0,93,255:34,0 chr1 156816477 . C . PASS END=156816477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 156816478 . A . PASS END=156816506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:35,0 chr1 156816507 . A . PASS END=156816507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:33,0 chr1 156816508 . C . PASS END=156816515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1221:0,102,255:34,0 chr1 156816516 . T . PASS END=156816516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:30,0 chr1 156816517 . G . PASS END=156816527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:31,0 chr1 156816528 . C . PASS END=156816549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:24:0,62,953:0,62,255:26,0 chr1 156818713 . G . PASS END=156818716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,992:0,78,255:26,0 chr1 156818717 . C . PASS END=156818732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:34,0 chr1 156818733 . G . PASS END=156818733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:33,0 chr1 156818734 . A . PASS END=156818803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:33:0,89,1249:0,89,255:37,0 chr1 156818804 . T . PASS END=156818804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr1 156818805 . C . PASS END=156818823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1166:0,83,255:33,0 chr1 156818824 . A . PASS END=156818838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,986:0,67,255:25,0 chr1 156818839 . C . PASS END=156818839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,855:0,71,255:19,0 chr1 156819038 . A . PASS END=156819039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156819040 . G . PASS END=156819043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 156819044 . C . PASS END=156819045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156819046 . C . PASS END=156819047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 156819048 . G . PASS END=156819048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156819049 . T . PASS END=156819049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 156819050 . C . PASS END=156819072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1110:0,80,255:35,0 chr1 156819073 . T . PASS END=156819075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:35,0 chr1 156819076 . G . PASS END=156819123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1282:0,89,255:37,0 chr1 156819124 . A . PASS END=156819124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:31,0 chr1 156819125 . T . PASS END=156819153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:31,0 chr1 156819154 . G . PASS END=156819166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,71,255:25,0 chr1 156819167 . T . PASS END=156819167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:22,0 chr1 156819168 . G . PASS END=156819172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 156819173 . C . PASS END=156819174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156819175 . G . PASS END=156819184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:22,0 chr1 156819185 . G . PASS END=156819207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:16:0,41,630:0,41,255:20,0 chr1 156819208 . A . PASS END=156819208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 156819209 . G . PASS END=156819209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156819210 . C . PASS END=156819210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:9,0 chr1 156819211 . T . PASS END=156819212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,495:0,31,255:11,0 chr1 156819213 . T . PASS END=156819213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:10,0 chr1 156819214 . T . PASS END=156819216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 156819217 . A . PASS END=156819217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr1 156819218 . G . PASS END=156819219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 156819220 . T . PASS END=156819220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:10,0 chr1 156819221 . T . PASS END=156819224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 156819225 . G . PASS END=156819225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 156819226 . T . PASS END=156819235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,398:0,36,255:13,0 chr1 156819236 . C . PASS END=156819236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 156819237 . G . PASS END=156819240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 156819241 . A . PASS END=156819241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,411:0,3,255:12,0 chr1 156819242 . G . PASS END=156819242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156819243 . A . LowGQ END=156819243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,404:10,0,255:12,0 chr1 156819244 . G . PASS END=156819244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 156819245 . T . PASS END=156819245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156819246 . G . LowGQ END=156819246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,382:2,0,255:12,0 chr1 156819247 . T . PASS END=156819247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,366:0,12,255:11,0 chr1 156819248 . A . LowGQ END=156819248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,324:8,0,255:7,0 chr1 156819249 . G . PASS END=156819249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 156819250 . T . PASS END=156819250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:9,0 chr1 156819251 . T . PASS END=156819251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,327:0,9,255:8,0 chr1 156819252 . C . PASS END=156819252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 156821082 . C . PASS END=156821093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 156821094 . G . PASS END=156821094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 156821095 . C . PASS END=156821097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,679:0,63,255:21,0 chr1 156821098 . C . PASS END=156821100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156821101 . C . PASS END=156821101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,554:0,29,255:17,0 chr1 156821102 . C . PASS END=156821107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,62,255:19,0 chr1 156821108 . T . PASS END=156821110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156821111 . T . PASS END=156821111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:19,0 chr1 156821112 . T . PASS END=156821123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 156821124 . A . PASS END=156821128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156821129 . G . PASS END=156821129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156821130 . C . PASS END=156821130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 156821131 . C . PASS END=156821145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 156821146 . C . PASS END=156821147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 156821148 . A . PASS END=156821151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,766:0,61,255:25,0 chr1 156821152 . A . PASS END=156821152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:22,0 chr1 156821153 . G . PASS END=156821199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,809:0,62,255:24,0 chr1 156821200 . T . PASS END=156821226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:19,0 chr1 156821438 . A . PASS END=156821529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1144:0,88,255:40,0 chr1 156821530 . C . PASS END=156821537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,79,255:25,0 chr1 156821538 . G . PASS END=156821538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:21,0 chr1 156821539 . C . PASS END=156821539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:28:0,63,945:0,67,255:21,0 chr1 156821540 . A . PASS END=156821567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,605:0,40,255:18,0 chr1 156821568 . G . PASS END=156821568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 156821569 . T . PASS END=156821574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 156821575 . A . PASS END=156821580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:17:0,37,585:0,37,255:13,0 chr1 156821680 . C . PASS END=156821682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 156821683 . C . PASS END=156821686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156821687 . T . PASS END=156821687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,582:0,5,255:18,0 chr1 156821688 . A . PASS END=156821694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 156821695 . G . PASS END=156821696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156821697 . G . PASS END=156821697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 156821698 . A . PASS END=156821699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156821700 . G . PASS END=156821703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,706:0,46,255:19,0 chr1 156821704 . G . PASS END=156821730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,837:0,63,255:25,0 chr1 156821731 . T . PASS END=156821731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 156821732 . G . PASS END=156821740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,801:0,72,255:25,0 chr1 156821741 . C . PASS END=156821741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 156821742 . G . PASS END=156821753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,909:0,75,255:25,0 chr1 156821754 . A . PASS END=156821754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr1 156821755 . C . PASS END=156821755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 156821756 . G . PASS END=156821766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:23,0 chr1 156821767 . G . PASS END=156821775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 156821776 . C . PASS END=156821776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156821777 . T . PASS END=156821777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 156821778 . G . PASS END=156821780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 156821781 . A . PASS END=156821783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 156821784 . G . PASS END=156821787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156821788 . T . PASS END=156821788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 156821789 . C . PASS END=156821789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156821790 . A . PASS END=156821791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156821792 . C . PASS END=156821792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156821793 . T . PASS END=156821793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 156821794 . G . PASS END=156821794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156821795 . T . PASS END=156821803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,706:0,46,255:19,0 chr1 156821804 . G . PASS END=156821804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 156821805 . C . PASS END=156821818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,706:0,46,255:19,0 chr1 156821819 . G . PASS END=156821825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156821826 . G . PASS END=156821826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 156821827 . C . PASS END=156821832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 156821833 . G . PASS END=156821845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 156821846 . G . PASS END=156821851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156821852 . C . PASS END=156821853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156821854 . C . PASS END=156821878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr1 156821879 . C . PASS END=156821879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 156821880 . T . PASS END=156821881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156821882 . C . PASS END=156821882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 156821883 . A . PASS END=156821883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156821884 . C . PASS END=156821884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 156821885 . A . PASS END=156821889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 156821890 . C . PASS END=156821890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 156821891 . G . PASS END=156821906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,848:0,69,255:24,0 chr1 156821907 . G . PASS END=156821907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 156821908 . C . PASS END=156821911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 156821912 . A . PASS END=156821929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 156821930 . T . PASS END=156821930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr1 156821931 . G . PASS END=156821972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,576:0,44,255:19,0 chr1 156821973 . G . PASS END=156821983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,535:0,31,255:13,0 chr1 156823544 . C . PASS END=156823547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 156823548 . C . PASS END=156823548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 156823549 . T . PASS END=156823600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,786:0,62,255:26,0 chr1 156823601 . T . PASS END=156823602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 156823603 . T . PASS END=156823636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,68,255:26,0 chr1 156823637 . C . PASS END=156823637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 156823638 . A . PASS END=156823639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 156823640 . G . PASS END=156823645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 156823646 . C . PASS END=156823653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 156823654 . C . PASS END=156823654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 156823655 . A . PASS END=156823655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 156823656 . C . PASS END=156823675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 156823676 . C . PASS END=156823679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156823680 . G . PASS END=156823682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156823683 . G . PASS END=156823688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 156823689 . G . PASS END=156823726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,869:0,62,255:25,0 chr1 156823727 . T . PASS END=156823727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 156823728 . G . PASS END=156823728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 156823729 . G . PASS END=156823756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,584:0,40,255:19,0 chr1 156823757 . C . PASS END=156823764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 156823765 . A . PASS END=156823788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,698:0,57,255:19,0 chr1 156823789 . A . PASS END=156823796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156823797 . C . PASS END=156823798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 156823799 . G . PASS END=156823827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,803:0,62,255:26,0 chr1 156823828 . A . PASS END=156823828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156823829 . A . PASS END=156823837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,842:0,65,255:26,0 chr1 156823838 . G . PASS END=156823842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 156823843 . T . PASS END=156823844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:74:30:0,74,1063:0,74,255:26,0 chr1 156823845 . G . PASS END=156823848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 156823849 . A . PASS END=156823849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:28,0 chr1 156823850 . G . PASS END=156823859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 156823860 . C . PASS END=156823860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 156823861 . G . PASS END=156823863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 156823864 . C . PASS END=156823864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 156823865 . C . PASS END=156823868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 156823869 . G . PASS END=156823869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 156823870 . A . PASS END=156823870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:28,0 chr1 156823871 . T . PASS END=156823871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 156823872 . G . PASS END=156823872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156823873 . A . PASS END=156823905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1250:0,89,255:34,0 chr1 156823906 . T . PASS END=156823906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:31,0 chr1 156823907 . C . PASS END=156823932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:34,0 chr1 156823933 . A . PASS END=156823933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 156823934 . G . PASS END=156823977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1294:0,92,255:36,0 chr1 156823978 . A . PASS END=156823978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:31,0 chr1 156823979 . A . PASS END=156824095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1252:0,81,255:40,0 chr1 156828329 . C . PASS END=156828331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156828332 . C . PASS END=156828336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr1 156828337 . G . PASS END=156828337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 156828338 . T . PASS END=156828339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 156828340 . T . PASS END=156828357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:28,0 chr1 156828358 . G . PASS END=156828363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156828364 . A . PASS END=156828377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 156828378 . G . PASS END=156828400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 156828401 . T . PASS END=156828401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 156828402 . A . PASS END=156828412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 156828413 . T . PASS END=156828413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156830727 . A . PASS END=156830763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,205:0,21,205:9,0 chr1 156830764 . A . LowGQ END=156830764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:8,0 chr1 156830765 . C . PASS END=156830785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr1 156830786 . C . PASS END=156830789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 156830790 . C . PASS END=156830794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156830795 . G . PASS END=156830808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr1 156830809 . T . PASS END=156830809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 156830810 . G . PASS END=156830813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156830814 . T . PASS END=156830814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,525:0,32,255:15,0 chr1 156830815 . C . PASS END=156830826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 156830827 . C . PASS END=156830828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 156830829 . C . PASS END=156830831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 156830832 . T . PASS END=156830845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr1 156830846 . C . PASS END=156830846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 156830847 . T . PASS END=156830848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 156830849 . C . PASS END=156830849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 156830850 . C . PASS END=156830876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,692:0,44,255:19,0 chr1 156830877 . A . PASS END=156830878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 156830879 . C . PASS END=156830914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 156830915 . C . PASS END=156830915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 156830916 . G . PASS END=156830925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 156830926 . A . PASS END=156830930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156830931 . A . PASS END=156830931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 156830932 . C . PASS END=156830934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 156830935 . A . PASS END=156830937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 156830938 . T . PASS END=156830938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 156830948 . C . PASS END=156830948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 156834141 . C . PASS END=156834141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156834146 . C . PASS END=156834146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 156834147 . T . PASS END=156834147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 156834148 . A . PASS END=156834156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156834157 . A . PASS END=156834157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 156834158 . C . PASS END=156834159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 156834160 . A . PASS END=156834164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 156834165 . C . PASS END=156834177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,917:0,69,255:25,0 chr1 156834178 . T . PASS END=156834178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 156834179 . G . PASS END=156834206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,902:0,61,255:25,0 chr1 156834207 . G . PASS END=156834207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 156834208 . A . PASS END=156834211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 156834212 . G . PASS END=156834212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 156834213 . A . PASS END=156834218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156834219 . C . PASS END=156834219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156834220 . T . PASS END=156834221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156834515 . C . PASS END=156834515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 156834520 . C . PASS END=156834591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:36:0,90,1316:0,92,255:40,0 chr1 156834596 . G . PASS END=156834596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 156834817 . G . PASS END=156834817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:34,0 chr1 156834864 . G . PASS END=156834936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1149:0,80,255:36,0 chr1 156834937 . T . PASS END=156834937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 156834938 . T . PASS END=156834940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156834941 . C . PASS END=156834954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:25,0 chr1 156836700 . A . PASS END=156836700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156836702 . G . PASS END=156836702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156836703 . A . PASS END=156836703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:27,0 chr1 156836704 . A . PASS END=156836770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1135:0,85,255:35,0 chr1 156836773 . G . PASS END=156836773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 156837895 . G . PASS END=156837896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 156837897 . G . PASS END=156837897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:18,0 chr1 156837898 . T . PASS END=156837898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:18,0 chr1 156837899 . C . PASS END=156837899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156837900 . C . PASS END=156837900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 156837901 . T . PASS END=156837902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 156837903 . T . PASS END=156837903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 156837904 . C . PASS END=156837904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 156837905 . G . PASS END=156837906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 156837907 . G . PASS END=156837908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 156837909 . A . PASS END=156837912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 156837913 . C . PASS END=156837913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr1 156837914 . T . PASS END=156837914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,811:0,72,255:24,0 chr1 156837915 . C . PASS END=156837915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 156837916 . T . PASS END=156837916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 156837917 . G . PASS END=156837917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 156837918 . C . PASS END=156837918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 156837919 . A . PASS END=156837927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,886:0,61,255:26,0 chr1 156837928 . G . PASS END=156837928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 156837929 . T . PASS END=156837929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,886:0,61,255:25,0 chr1 156837930 . G . PASS END=156837932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr1 156837933 . C . PASS END=156837933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:26,0 chr1 156837934 . T . PASS END=156837936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 156837937 . G . PASS END=156837937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156837938 . C . PASS END=156837938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 156837939 . T . PASS END=156837940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156837941 . G . PASS END=156837942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 156837943 . T . PASS END=156837944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,86,255:28,0 chr1 156837945 . C . PASS END=156837945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr1 156837946 . A . PASS END=156837949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr1 156837950 . C . PASS END=156837950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 156837951 . T . PASS END=156837956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1035:0,84,255:30,0 chr1 156837957 . G . PASS END=156837958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 156837959 . G . PASS END=156837959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156837960 . G . PASS END=156837960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 156837961 . A . PASS END=156837969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 156837970 . G . PASS END=156837970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 156837971 . C . PASS END=156837993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 156837994 . A . PASS END=156837994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 156837995 . G . PASS END=156837995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156837996 . T . PASS END=156837996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 156837997 . G . PASS END=156837997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156837998 . T . PASS END=156837998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:26,0 chr1 156837999 . C . PASS END=156838000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156838001 . T . PASS END=156838002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156838003 . G . PASS END=156838007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 156838008 . G . PASS END=156838027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:24,0 chr1 156838028 . C . PASS END=156838028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:20,0 chr1 156838029 . A . PASS END=156838036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156838037 . C . PASS END=156838037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 156838038 . T . PASS END=156838039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156838040 . T . PASS END=156838042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,774:0,50,255:19,0 chr1 156838282 . G . PASS END=156838282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 156838295 . A . PASS END=156838295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 156838297 . G . PASS END=156838418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1002:0,81,255:35,0 chr1 156838419 . G . PASS END=156838419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 156838420 . A . PASS END=156838422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 156838423 . A . PASS END=156838438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,65,255:26,0 chr1 156838439 . G . PASS END=156838440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,75,255:18,0 chr1 156838443 . A . PASS END=156838443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156841414 . G . PASS END=156841433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:25,0 chr1 156841434 . C . PASS END=156841547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1008:0,81,255:40,0 chr1 156841558 . G . PASS END=156841558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 156843392 . T . PASS END=156843392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 156843425 . T . PASS END=156843425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1048:0,69,255:30,0 chr1 156843426 . C . PASS END=156843427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 156843428 . C . PASS END=156843428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:21:34:0,21,978:0,21,255:28,0 chr1 156843429 . G . PASS END=156843431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1142:0,85,255:31,0 chr1 156843432 . C . PASS END=156843432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:29,0 chr1 156843433 . A . LowGQ END=156843433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:0:32:0,0,845:1,0,255:26,0 chr1 156843434 . G . PASS END=156843436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:69:36:0,69,1086:0,69,255:33,0 chr1 156843437 . T . PASS END=156843437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1144:0,91,255:34,0 chr1 156843438 . G . PASS END=156843438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1006:0,74,255:30,0 chr1 156843439 . C . PASS END=156843442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:41:36:0,41,835:0,41,255:30,0 chr1 156843443 . T . LowGQ END=156843443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,7:35:0:35:0,0,714:12,0,255:25,0 chr1 156843444 . G . PASS END=156843444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:21:35:0,21,804:0,21,255:27,0 chr1 156843445 . C . PASS END=156843445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1025:0,88,255:31,0 chr1 156843446 . A . PASS END=156843446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:38:35:0,38,897:0,38,255:28,0 chr1 156843447 . C . PASS END=156843447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1217:0,89,255:30,0 chr1 156843448 . A . PASS END=156843448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1158:0,66,255:31,0 chr1 156843449 . C . PASS END=156843449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:24:34:0,24,1036:0,24,255:28,0 chr1 156843450 . G . LowGQ END=156843450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,7:33:0:33:0,0,692:68,0,255:25,0 chr1 156843451 . G . PASS END=156843452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,993:0,66,255:28,0 chr1 156843453 . G . PASS END=156843457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1081:0,82,255:30,0 chr1 156843458 . A . LowGQ END=156843458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,10:34:0:34:0,0,535:101,0,255:22,0 chr1 156843459 . G . PASS END=156843459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1031:0,52,255:29,0 chr1 156843460 . A T, 0.12 DRAGENSnpHardQUAL DP=24;MQ=241.49;MQRankSum=1.167;ReadPosRankSum=2.500;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:18,6,0:0.250,0.000:24:11,2,0:7,4,0:16:19,0,47,147,147,147:109,0,255:24,0:1.2258e-01,1.5555e+01,6.5555e+01,1.6254e+02,1.9731e+02,1.6555e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,8,6,0:7,11,2,4 chr1 156843461 . T . PASS END=156843461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 156843462 . G . LowGQ END=156843462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,9:33:0:33:0,0,624:73,0,255:23,0 chr1 156843463 . C . PASS END=156843463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:15:33:0,15,736:0,15,255:24,0 chr1 156843464 . A . PASS END=156843464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,911:0,49,255:25,0 chr1 156843465 . C . PASS END=156843466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1066:0,71,255:29,0 chr1 156843467 . A . PASS END=156843467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1092:0,55,255:26,0 chr1 156843468 . C . PASS END=156843468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 156843469 . T . LowGQ END=156843470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,596:3,0,255:23,0 chr1 156843471 . G . PASS END=156843472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 156843473 . G . PASS END=156843473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1078:0,69,255:26,0 chr1 156843474 . C . PASS END=156843474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:7:32:0,7,742:0,7,255:24,0 chr1 156843475 . A . PASS END=156843475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1055:0,88,255:29,0 chr1 156843476 . T . LowGQ END=156843477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:34:0,0,717:7,0,255:28,0 chr1 156843478 . C . PASS END=156843478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1005:0,46,255:29,0 chr1 156843479 . C . PASS END=156843480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 156843481 . T . LowGQ END=156843481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,7:33:0:33:0,0,719:39,0,255:26,0 chr1 156843482 . T . PASS END=156843482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1009:0,52,255:29,0 chr1 156843483 . C . PASS END=156843483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,893:0,32,255:29,0 chr1 156843484 . T . PASS END=156843484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,903:0,49,255:29,0 chr1 156843485 . C . LowGQ END=156843485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,814:1,0,255:25,0 chr1 156843486 . T . PASS END=156843486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,964:0,27,255:28,0 chr1 156843487 . G . PASS END=156843489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1000:0,82,255:31,0 chr1 156843490 . G . PASS END=156843490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:29,0 chr1 156843491 . A . LowGQ END=156843491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,828:45,0,255:25,0 chr1 156843492 . T . PASS END=156843493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,922:0,62,255:29,0 chr1 156843494 . G . PASS END=156843497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 156843498 . G . PASS END=156843498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,856:0,43,255:26,0 chr1 156843499 . C . PASS END=156843500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156843501 . G . PASS END=156843501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,858:0,10,255:26,0 chr1 156843502 . G . PASS END=156843503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156843504 . A . PASS END=156843505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1066:0,63,255:28,0 chr1 156843506 . C . PASS END=156843506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 156843507 . G . PASS END=156843507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,911:0,57,255:26,0 chr1 156843508 . T . PASS END=156843508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 156843509 . C . PASS END=156843509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr1 156843510 . T . LowGQ END=156843510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,848:37,0,255:26,0 chr1 156843511 . C . PASS END=156843511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 156843512 . T . PASS END=156843512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:7:31:0,7,925:0,7,255:27,0 chr1 156843513 . G . PASS END=156843513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:29,0 chr1 156843514 . C . PASS END=156843515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:31,0 chr1 156843516 . C . PASS END=156843516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1006:0,46,255:27,0 chr1 156843517 . T . PASS END=156843517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,1000:0,29,255:27,0 chr1 156843518 . G . PASS END=156843518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 156843519 . G . PASS END=156843520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 156843521 . T . PASS END=156843521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:26,0 chr1 156843522 . C . PASS END=156843522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:28,0 chr1 156843523 . T . PASS END=156843524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156843525 . C . PASS END=156843525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1031:0,49,255:28,0 chr1 156843526 . A . PASS END=156843527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 156843528 . T . PASS END=156843528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,889:0,32,255:27,0 chr1 156843529 . G . PASS END=156843529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1039:0,46,255:25,0 chr1 156843530 . G . PASS END=156843531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 156843532 . T . PASS END=156843532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 156843533 . C . PASS END=156843533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,963:0,43,255:25,0 chr1 156843534 . C . PASS END=156843534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156843535 . G . PASS END=156843535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,974:0,59,255:26,0 chr1 156843536 . T . PASS END=156843541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:28:0,70,972:0,70,255:27,0 chr1 156843542 . A . PASS END=156843543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156843544 . G . PASS END=156843545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,909:0,40,255:25,0 chr1 156843546 . G . PASS END=156843546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156843547 . A . PASS END=156843548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:40:30:0,40,906:0,40,255:26,0 chr1 156843549 . C . PASS END=156843552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 156843553 . T . PASS END=156843553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,928:0,37,255:24,0 chr1 156843554 . T . PASS END=156843554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156843555 . C . PASS END=156843555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,903:0,53,255:26,0 chr1 156843556 . A . PASS END=156843556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156843557 . T . PASS END=156843557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:24,0 chr1 156843558 . C . PASS END=156843558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,889:0,12,255:23,0 chr1 156843559 . T . PASS END=156843559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,817:0,51,255:24,0 chr1 156843560 . T . PASS END=156843560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 156843561 . C . PASS END=156843561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:23,0 chr1 156843562 . A . PASS END=156843563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 156843564 . T . PASS END=156843564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,831:0,26,255:22,0 chr1 156843565 . G . PASS END=156843565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,814:0,9,255:22,0 chr1 156843566 . A . PASS END=156843569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:24,0 chr1 156843570 . C . PASS END=156843570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:24,0 chr1 156843571 . C . PASS END=156843571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 156843572 . T . PASS END=156843572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:22,0 chr1 156843573 . G . PASS END=156843575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,880:0,64,255:22,0 chr1 156843576 . G . PASS END=156843577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:24:0,42,814:0,42,255:23,0 chr1 156843578 . C . PASS END=156843583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr1 156843584 . C . PASS END=156843718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,986:0,81,255:39,0 chr1 156843719 . C . PASS END=156843719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:31,0 chr1 156843720 . T . PASS END=156843743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:32,0 chr1 156843744 . C . PASS END=156843748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156843749 . C . PASS END=156843751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156844175 . T . PASS END=156844192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:44:0,93,1383:0,93,255:40,0 chr1 156844352 . T . PASS END=156844352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr1 156844359 . A . PASS END=156844359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 156844362 . G . PASS END=156844418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,117,1634:0,117,255:40,0 chr1 156844683 . C . PASS END=156844683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 156844692 . C . PASS END=156844692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 156844698 . G . PASS END=156844801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:45:0,91,1558:0,91,255:40,0 chr1 156844809 . G . PASS END=156844809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:90:44:0,90,1350:0,99,255:29,0 chr1 156845312 . G . PASS END=156845318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 156845319 . T . PASS END=156845319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 156845320 . G . PASS END=156845331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 156845332 . G . PASS END=156845337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 156845338 . G . PASS END=156845338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 156845339 . G . PASS END=156845347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 156845348 . T . PASS END=156845348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:26,0 chr1 156845349 . G . PASS END=156845354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 156845355 . G . PASS END=156845366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 156845367 . A . PASS END=156845367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:24,0 chr1 156845368 . T . PASS END=156845384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:26,0 chr1 156845385 . G . PASS END=156845388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 156845389 . C . PASS END=156845391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156845392 . A . PASS END=156845393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156845394 . C . PASS END=156845398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 156845399 . G . PASS END=156845401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156845402 . A . PASS END=156845445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:26,0 chr1 156845446 . T . PASS END=156845446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 156845447 . T . PASS END=156845447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:18,0 chr1 156845448 . C . PASS END=156845448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:19,0 chr1 156845449 . A . PASS END=156845456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,743:0,50,255:19,0 chr1 156845457 . C . PASS END=156845457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr1 156845458 . T . PASS END=156845458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 156845863 . C . PASS END=156846002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,105,1575:0,135,255:40,0 chr1 156846006 . A . PASS END=156846006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,102,1530:0,132,255:34,0 chr1 156846191 . G . PASS END=156846195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 156846196 . T . PASS END=156846232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,659:0,51,255:18,0 chr1 156846233 . G A, 48.81 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=2.931;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:5,3,0:6,5,0:47:84,0,50,241,369,610:215,0,255:8,0:4.8806e+01,7.8953e-05,5.3000e+01,2.4126e+02,4.0387e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,2,6:7,4,5,3 chr1 156846234 . C . PASS END=156846262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,704:0,44,255:19,0 chr1 156846263 . G . PASS END=156846270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 156846271 . A . PASS END=156846273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:22,0 chr1 156846274 . T . PASS END=156846274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 156846275 . C . PASS END=156846318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,66,255:26,0 chr1 156846319 . T . PASS END=156846342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:17:0,44,675:0,44,255:19,0 chr1 156846343 . G . PASS END=156846363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,404:0,33,255:13,0 chr1 156846364 . G . PASS END=156846364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 156848914 . A . PASS END=156848916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 156848917 . C . PASS END=156848917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 156848918 . C . PASS END=156848952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:19,0 chr1 156848953 . G . PASS END=156848957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:21,0 chr1 156848958 . T . PASS END=156848992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 156848993 . G . PASS END=156848993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 156848994 . C . PASS END=156848994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156848995 . C T, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=2.698;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:7,9,0:3,4,0:48:85,0,49,465,350,815:255,0,255:10,0:5.0000e+01,6.9893e-05,5.2145e+01,4.5000e+02,3.8438e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,9,4:7,3,9,4 chr1 156848996 . G . PASS END=156849018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:24,0 chr1 156849019 . G . PASS END=156849019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 156849020 . A . PASS END=156849032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 156849033 . C . PASS END=156849047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 156849048 . T . PASS END=156849048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:22,0 chr1 156849049 . G . PASS END=156849085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 156849086 . C . PASS END=156849086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 156849087 . A . PASS END=156849090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 156849091 . A . PASS END=156849091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 156849092 . C . PASS END=156849104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,785:0,66,255:23,0 chr1 156849105 . T . PASS END=156849105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr1 156849106 . T . PASS END=156849117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:25,0 chr1 156849118 . C . PASS END=156849118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 156849119 . A . PASS END=156849123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156849124 . C . PASS END=156849124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 156849125 . A . PASS END=156849133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,840:0,72,255:24,0 chr1 156849134 . T . PASS END=156849134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:19,0 chr1 156849135 . A . PASS END=156849138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 156849139 . C . PASS END=156849155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:20:0,48,713:0,49,255:19,0 chr1 156849157 . A . PASS END=156849157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 156849783 . C . PASS END=156849783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 156849785 . T . PASS END=156849785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 156849791 . G . PASS END=156849823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,762:0,63,255:26,0 chr1 156849824 . A . PASS END=156849902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1016:0,81,255:36,0 chr1 156849903 . T . PASS END=156849903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:28,0 chr1 156849904 . C . PASS END=156849912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr1 156849913 . C . PASS END=156849913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 156849914 . G . PASS END=156849919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156849920 . C . PASS END=156849937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 156849938 . T . PASS END=156849939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156849940 . C . PASS END=156849949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,68,255:26,0 chr1 156849962 . C . PASS END=156849962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 156850241 . A . PASS END=156850246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,161,255:40,0 chr1 156851238 . G . PASS END=156851238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 156851249 . G . PASS END=156851249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 156851250 . C . PASS END=156851258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 156851259 . G . PASS END=156851259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 156851260 . C . PASS END=156851260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 156851261 . A . PASS END=156851315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:18,0 chr1 156851316 . C . PASS END=156851351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:13,0 chr1 156851352 . A . PASS END=156851355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 156851356 . C . PASS END=156851358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 156851359 . C . PASS END=156851360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 156851361 . G . PASS END=156851410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:13,0 chr1 156851411 . G . PASS END=156851413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 156851414 . T . PASS END=156851431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 156851432 . T . PASS END=156851432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 156851433 . A . PASS END=156851434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 156851440 . C . PASS END=156851440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 156851473 . C . PASS END=156851473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156851490 . C . PASS END=156851490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 156851530 . G . PASS END=156851530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156852463 . A C, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=5.071;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,24,0:0.571,0.000:42:10,11,0:8,13,0:48:85,0,48,847,636,1483:255,0,255:16,0:5.0000e+01,7.5847e-05,5.1259e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,6,18:8,10,15,9 chr1 156869047 . G . PASS END=156869047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1513:0,113,255:39,0 chr1 156869714 . G . PASS END=156869714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 156873510 . A . PASS END=156873511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 156873512 . G . PASS END=156873512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 156873513 . A . PASS END=156873518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 156873519 . G . PASS END=156873521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156873522 . C . PASS END=156873522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 156873523 . G . PASS END=156873531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 156873532 . G . PASS END=156873532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 156873533 . A . PASS END=156873534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156873535 . G . PASS END=156873535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 156873536 . T . PASS END=156873536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 156873537 . G . PASS END=156873537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 156873538 . A . PASS END=156873576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1117:0,90,255:35,0 chr1 156873577 . A . PASS END=156873577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:30,0 chr1 156873578 . G . PASS END=156873604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1294:0,89,255:34,0 chr1 156873605 . G . PASS END=156873605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr1 156873606 . C . PASS END=156873618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:33,0 chr1 156873619 . T . PASS END=156873619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:31,0 chr1 156873620 . C . PASS END=156873689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1263:0,89,255:37,0 chr1 156873690 . C . PASS END=156873711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:37:0,98,1372:0,98,255:38,0 chr1 156873712 . C . PASS END=156873712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,0 chr1 156873713 . T . PASS END=156873719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1451:0,114,255:39,0 chr1 156873720 . T . PASS END=156873720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1246:0,78,255:35,0 chr1 156873721 . G . PASS END=156873726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:39:0,96,1440:0,117,255:36,0 chr1 156873727 . G A, 50.00 PASS DP=39;MQ=249.39;MQRankSum=4.699;ReadPosRankSum=1.039;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,25,0:0.641,0.000:39:6,15,0:8,10,0:45:85,0,44,807,493,1300:255,0,255:13,0:5.0000e+01,1.3513e-04,4.6757e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,10,15:5,9,14,11 chr1 156873728 . C . PASS END=156873754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:37:0,104,1370:0,104,255:39,0 chr1 156873755 . G . PASS END=156873755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr1 156873756 . T . PASS END=156873764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:37,0 chr1 156873765 . G . PASS END=156873816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1188:0,85,255:37,0 chr1 156873817 . A . PASS END=156873819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:24,0 chr1 156874540 . C . PASS END=156874549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,435:0,39,255:13,0 chr1 156874550 . A . PASS END=156874550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 156874551 . C . PASS END=156874560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156874561 . G . PASS END=156874566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 156874567 . C . PASS END=156874574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156874575 . C . PASS END=156874585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 156874586 . C . PASS END=156874592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 156874593 . C . PASS END=156874593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:11,0 chr1 156874594 . A . PASS END=156874596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr1 156874597 . G . PASS END=156874597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 156874598 . C . PASS END=156874598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 156874599 . C . PASS END=156874599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 156874600 . C . PASS END=156874607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 156874608 . G . PASS END=156874608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 156874609 . G . PASS END=156874630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:18,0 chr1 156874631 . T . PASS END=156874631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr1 156874632 . G . PASS END=156874632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:18,0 chr1 156874633 . C . PASS END=156874637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 156874638 . A . PASS END=156874638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 156874639 . G . PASS END=156874644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 156874736 . A . PASS END=156874775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1225:0,86,255:34,0 chr1 156874776 . C . PASS END=156874776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:29,0 chr1 156874777 . A . PASS END=156874780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 156874781 . T . PASS END=156874781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:27,0 chr1 156874782 . C . PASS END=156874784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156874785 . T . PASS END=156874790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:29:0,62,1041:0,62,255:26,0 chr1 156875116 . G . PASS END=156875116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 156875117 . G . PASS END=156875146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:29:0,86,1049:0,86,255:35,0 chr1 156875147 . G . PASS END=156875193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1060:0,83,255:36,0 chr1 156875194 . T . PASS END=156875194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 156875195 . G . PASS END=156875199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 156875200 . C . PASS END=156875216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,1125:0,63,255:26,0 chr1 156876068 . C . PASS END=156876160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:34:0,102,1288:0,102,255:40,0 chr1 156876429 . A . PASS END=156876434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 156876435 . C . PASS END=156876456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr1 156876457 . G . PASS END=156876463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 156876464 . A . PASS END=156876464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,688:0,44,255:19,0 chr1 156876465 . A . PASS END=156876477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 156876478 . C . PASS END=156876478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 156876479 . G . PASS END=156876479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 156876480 . G . PASS END=156876480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 156876481 . C . PASS END=156876488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 156876489 . G . PASS END=156876489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 156876490 . C . PASS END=156876494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr1 156876495 . G . PASS END=156876496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 156876497 . G . PASS END=156876508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,898:0,62,255:25,0 chr1 156876509 . G . PASS END=156876509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 156876510 . G . PASS END=156876515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 156876516 . G . PASS END=156876516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 156876517 . T . PASS END=156876523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,870:0,75,255:25,0 chr1 156876524 . C . PASS END=156876524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 156876525 . C . PASS END=156876526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 156876527 . T . PASS END=156876527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:24,0 chr1 156876528 . C . PASS END=156876577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:25,0 chr1 156876578 . G . PASS END=156876578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 156876579 . G . PASS END=156876585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 156876586 . C . PASS END=156876586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 156876587 . T . PASS END=156876596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 156876597 . G . PASS END=156876614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 156876615 . C . PASS END=156876620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr1 156876621 . G . PASS END=156876627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 156876628 . C . PASS END=156876628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 156876629 . C . PASS END=156876657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,621:0,48,255:17,0 chr1 156876658 . G . PASS END=156876672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 156877402 . C . PASS END=156877409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1003:0,83,255:35,0 chr1 156877410 . T . PASS END=156877410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:33,0 chr1 156877411 . G . PASS END=156877419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1620:0,111,255:40,0 chr1 156877420 . C . PASS END=156877456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,105,1595:0,105,255:40,0 chr1 156877457 . T C, 188.45 PASS DP=47;MQ=249.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,18,0:0,29,0:138:226,141,0,1794,141,1794:255,141,0:0,0:1.8845e+02,1.3845e+02,0.0000e+00,4.5000e+02,1.7322e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,21:0,0,25,22 chr1 156877458 . C . PASS END=156877494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,114,1545:0,115,255:40,0 chr1 156877495 . C . PASS END=156877520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1247:0,86,255:38,0 chr1 156877521 . T . PASS END=156877522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,990:0,99,255:22,0 chr1 156877707 . G . PASS END=156877710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,635:0,51,255:19,0 chr1 156877711 . C . PASS END=156877712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 156877713 . A . PASS END=156877713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 156877714 . T . PASS END=156877759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:25,0 chr1 156877760 . C . PASS END=156877773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr1 156877774 . G . PASS END=156877785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:28,0 chr1 156877786 . G . PASS END=156877786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 156877787 . C . PASS END=156877788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156877789 . T . PASS END=156877790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,926:0,45,255:26,0 chr1 156877791 . T . PASS END=156877791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156877792 . G . PASS END=156877796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,986:0,67,255:26,0 chr1 156877797 . C A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=-0.411;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:5,9,0:6,5,0:48:85,0,49,456,365,821:255,0,255:11,0:5.0000e+01,6.9634e-05,5.2190e+01,4.5000e+02,3.9938e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,8,6:5,6,7,7 chr1 156877798 . G . PASS END=156877804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1016:0,68,255:26,0 chr1 156877805 . T . PASS END=156877805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr1 156877806 . G . PASS END=156877823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr1 156877824 . C . PASS END=156877825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 156877826 . G . PASS END=156877829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:20,0 chr1 156877830 . T . PASS END=156877830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:19,0 chr1 156877831 . A . PASS END=156877833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,64,255:20,0 chr1 156877834 . C . PASS END=156877843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:26:0,50,765:0,50,255:19,0 chr1 156877920 . G . PASS END=156877920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 156877921 . T . PASS END=156877922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1047:0,74,255:29,0 chr1 156877923 . C . PASS END=156877927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 156877928 . A . PASS END=156877973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:32:0,93,1303:0,96,255:36,0 chr1 156877974 . C . PASS END=156877974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr1 156877975 . G . PASS END=156877993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1286:0,89,255:34,0 chr1 156877994 . G . PASS END=156877994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 156877995 . T . PASS END=156878009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1294:0,89,255:34,0 chr1 156878010 . C . PASS END=156878010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:28,0 chr1 156878011 . G . PASS END=156878030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 156878031 . C . PASS END=156878032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 156878033 . G . PASS END=156878035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 156878036 . T . PASS END=156878045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1069:0,71,255:26,0 chr1 156878046 . C . PASS END=156878062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156878063 . T . PASS END=156878095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,768:0,66,255:27,0 chr1 156878096 . A . PASS END=156878123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 156878124 . C . PASS END=156878132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:27:15:0,27,405:0,29,255:9,0 chr1 156878447 . C . PASS END=156878455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 156878456 . G . PASS END=156878463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,484:0,42,255:15,0 chr1 156878464 . G . PASS END=156878464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 156878465 . G . PASS END=156878470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:17,0 chr1 156878471 . C . PASS END=156878471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 156878472 . T . PASS END=156878493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:19,0 chr1 156878494 . G . PASS END=156878501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156878502 . T . PASS END=156878512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,697:0,46,255:19,0 chr1 156878513 . C . PASS END=156878525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:24,0 chr1 156878526 . A . PASS END=156878526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 156878527 . C . PASS END=156878530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 156878531 . T C, 46.71 PASS DP=24;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=1.908;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:6,3,0:9,6,0:45:81,0,47,181,181,181:232,0,255:14,0:4.6707e+01,1.3616e-04,5.0000e+01,1.8148e+02,2.1625e+02,1.8449e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,9,7,2:9,6,3,6 chr1 156878532 . G . PASS END=156878536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 156878537 . A . PASS END=156878537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:20,0 chr1 156878538 . G . PASS END=156878544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 156878545 . A . PASS END=156878545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 156878546 . G . PASS END=156878563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:24:0,60,878:0,70,255:25,0 chr1 156878564 . G . PASS END=156878564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr1 156878565 . C . PASS END=156878566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 156878567 . C . PASS END=156878567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:23,0 chr1 156878568 . G . PASS END=156878568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 156878569 . G . PASS END=156878576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:25,0 chr1 156878577 . T . PASS END=156878577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 156878578 . G . PASS END=156878594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 156878595 . C . PASS END=156878595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 156878596 . T . PASS END=156878596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 156878597 . C . PASS END=156878597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 156878598 . T . PASS END=156878599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 156878600 . T . PASS END=156878600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:18,0 chr1 156878601 . C . PASS END=156878602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 156878603 . G . PASS END=156878603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 156878604 . T . PASS END=156878604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:18,0 chr1 156878605 . G . PASS END=156878605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:19,0 chr1 156878606 . C . PASS END=156878608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156878609 . G . PASS END=156878619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,642:0,47,255:19,0 chr1 156878620 . C . PASS END=156878620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,643:0,16,255:15,0 chr1 156878621 . G . PASS END=156878621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 156878708 . G . PASS END=156878715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:18,0 chr1 156878716 . C . PASS END=156878719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 156878720 . G . PASS END=156878721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 156878722 . T . PASS END=156878722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 156878723 . A . PASS END=156878723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 156878724 . G . PASS END=156878732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr1 156878733 . C . PASS END=156878733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 156878734 . T . PASS END=156878736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr1 156878737 . T C, 45.75 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=-0.085;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,9,0:0.360,0.000:25:6,4,0:10,5,0:45:81,0,50,293,489,782:252,0,255:16,0:4.5753e+01,1.3720e-04,5.3000e+01,2.9300e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,6,3:6,10,5,4 chr1 156878738 . G . PASS END=156878774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:25:0,67,745:0,67,255:26,0 chr1 156878775 . G . PASS END=156878782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 156878783 . G . PASS END=156878801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 156878802 . T . PASS END=156878812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 156878813 . T . PASS END=156878813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr1 156878814 . G . PASS END=156878825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr1 156878826 . A . PASS END=156878826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:22,0 chr1 156878827 . A . PASS END=156878828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 156879543 . G . PASS END=156879550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr1 156879551 . C . PASS END=156879555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 156879556 . T . PASS END=156879564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr1 156879565 . T . PASS END=156879565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 156879566 . G . PASS END=156879579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 156879580 . C T, 49.77 PASS DP=17;MQ=249.77;MQRankSum=3.416;ReadPosRankSum=2.069;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:6,1,0:3,7,0:48:85,0,50,229,322,550:199,0,255:9,0:4.9766e+01,6.7563e-05,5.3000e+01,2.2850e+02,3.5652e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,2,5,3:6,3,4,4 chr1 156879581 . G . PASS END=156879582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 156879583 . A . PASS END=156879584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 156879585 . C . PASS END=156879597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr1 156879598 . T . PASS END=156879598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 156879599 . T . PASS END=156879617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 156879618 . G . PASS END=156879629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,576:0,51,255:17,0 chr1 156879630 . C . PASS END=156879630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 156879631 . A . PASS END=156879644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,531:0,48,255:16,0 chr1 156879645 . A . PASS END=156879646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 156879647 . A . PASS END=156879658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,537:0,48,255:16,0 chr1 156879659 . A . PASS END=156879659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 156879660 . C . PASS END=156879680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,554:0,40,255:17,0 chr1 156879681 . G . PASS END=156879681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 156879682 . G . PASS END=156879686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156879687 . A . PASS END=156879691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:12,0 chr1 156879692 . C . PASS END=156879706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 156879798 . A . PASS END=156879805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 156879806 . G . PASS END=156879813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 156879814 . A . PASS END=156879815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 156879816 . G . PASS END=156879819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1086:0,84,255:29,0 chr1 156879820 . G . PASS END=156879820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 156879821 . T . PASS END=156879826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 156879827 . T . PASS END=156879827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 156879828 . C . PASS END=156879832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 156879833 . T . PASS END=156879833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 156879834 . G . PASS END=156879836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156879837 . T . PASS END=156879837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 156879838 . G . PASS END=156879838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 156879839 . T . PASS END=156879839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:27,0 chr1 156879840 . G . PASS END=156879840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 156879841 . A . PASS END=156879851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1178:0,86,255:31,0 chr1 156879852 . G . PASS END=156879864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:26:0,72,1080:0,78,255:26,0 chr1 156879865 . T . PASS END=156879865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:24,0 chr1 156879866 . T . PASS END=156879889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:25,0 chr1 156879890 . T . PASS END=156879890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156879891 . G . PASS END=156879895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156879896 . G . PASS END=156879900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 156880026 . G . PASS END=156880035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 156880036 . C . PASS END=156880036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 156880037 . C . PASS END=156880041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 156880042 . G . PASS END=156880172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:37:0,87,1319:0,87,255:40,0 chr1 156880410 . C . PASS END=156880412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 156880413 . G . PASS END=156880452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:26,0 chr1 156880453 . G . PASS END=156880453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156880454 . T . PASS END=156880470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr1 156880471 . C . PASS END=156880471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 156880472 . T . PASS END=156880511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 156880512 . G . PASS END=156880519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:16,0 chr1 156880520 . C . PASS END=156880524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:15,0 chr1 156880525 . C . PASS END=156880525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 156880526 . T . PASS END=156880526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 156880527 . G . PASS END=156880530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156880531 . C . PASS END=156880535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156881959 . C T, 49.32 PASS DP=37;MQ=249.10;MQRankSum=5.166;ReadPosRankSum=4.556;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,17,0:0.459,0.000:37:10,9,0:10,8,0:48:84,0,50,550,707,1257:255,0,255:19,0:4.9320e+01,7.2481e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,8,13,4:8,12,9,8 chr1 156882039 . C . PASS END=156882167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,117,1755:0,138,255:40,0 chr1 156882261 . C . PASS END=156882261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 156882286 . G . PASS END=156882414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1305:0,90,255:40,0 chr1 156882562 . G . PASS END=156882566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156882567 . C . PASS END=156882568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 156882569 . G . PASS END=156882573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,853:0,63,255:24,0 chr1 156882574 . C . PASS END=156882585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,898:0,84,255:29,0 chr1 156882586 . T . PASS END=156882586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 156882587 . G . PASS END=156882588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156882589 . C . PASS END=156882596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1131:0,77,255:26,0 chr1 156882597 . C . PASS END=156882601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 156882602 . A . PASS END=156882602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 156882603 . G . PASS END=156882626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:30,0 chr1 156882627 . A . PASS END=156882628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 156882629 . T . PASS END=156882651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 156882652 . T . PASS END=156882653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 156882654 . G . PASS END=156882670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 156882671 . A . PASS END=156882673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1039:0,71,255:26,0 chr1 156882674 . G . PASS END=156882678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156882679 . T . PASS END=156882743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,821:0,66,255:26,0 chr1 156882744 . C . PASS END=156882754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:20:0,53,814:0,53,255:19,0 chr1 156882755 . C . PASS END=156882773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 156882774 . G . PASS END=156882774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156882986 . A . PASS END=156882988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:22,0 chr1 156882989 . T . PASS END=156882989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 156882990 . C . PASS END=156882995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 156882996 . G C, 49.68 PASS DP=22;MQ=245.13;MQRankSum=3.923;ReadPosRankSum=3.198;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:7,5,0:5,5,0:48:84,0,50,350,400,750:255,0,255:11,0:4.9678e+01,6.8598e-05,5.3000e+01,3.4957e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,7,3:4,8,8,2 chr1 156882997 . A . PASS END=156882999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 156883000 . T . PASS END=156883000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 156883001 . A . PASS END=156883001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 156883002 . C . PASS END=156883002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 156883003 . A . PASS END=156883009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,908:0,69,255:24,0 chr1 156883010 . A . PASS END=156883010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 156883011 . C . PASS END=156883013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 156883014 . C . PASS END=156883014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 156883015 . T . PASS END=156883019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 156883020 . C . PASS END=156883020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 156883021 . C . PASS END=156883033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:23,0 chr1 156883034 . C . PASS END=156883036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 156883037 . T . PASS END=156883037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr1 156883038 . G . PASS END=156883041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156883042 . C . PASS END=156883042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,700:0,22,255:18,0 chr1 156883043 . A . PASS END=156883048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156883049 . C . PASS END=156883049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,668:0,24,255:20,0 chr1 156883050 . C . PASS END=156883050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 156883051 . C . PASS END=156883051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 156883052 . C . PASS END=156883052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 156883053 . A . PASS END=156883053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 156883054 . A . PASS END=156883056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,650:0,63,255:21,0 chr1 156883057 . C . PASS END=156883058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 156883059 . C . PASS END=156883059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:20,0 chr1 156883060 . C . PASS END=156883060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 156883061 . C . PASS END=156883062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 156883063 . C . PASS END=156883063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 156883064 . C . PASS END=156883064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 156883065 . C . PASS END=156883065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 156883066 . C . PASS END=156883066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 156883067 . C . PASS END=156883067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 156883068 . T . PASS END=156883070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156883071 . C . PASS END=156883074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,631:0,46,255:19,0 chr1 156883183 . G . PASS END=156883198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,734:0,63,255:23,0 chr1 156883199 . T . PASS END=156883199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 156883200 . T . PASS END=156883214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:25,0 chr1 156883215 . C A, 50.00 PASS DP=27;MQ=247.76;MQRankSum=3.663;ReadPosRankSum=3.716;FractionInformativeReads=0.963;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,16,0:0.615,0.000:26:4,11,0:6,5,0:47:85,0,47,543,345,889:255,0,255:10,0:5.0000e+01,8.5683e-05,5.0130e+01,4.5000e+02,3.8002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,9,7:3,7,10,6 chr1 156883216 . C . PASS END=156883252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,921:0,62,255:26,0 chr1 156883253 . A . PASS END=156883255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 156883256 . C . PASS END=156883256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156883257 . C . PASS END=156883285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 156883286 . G . PASS END=156883286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156883287 . G . PASS END=156883291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 156883292 . C . PASS END=156883315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 156883484 . G . PASS END=156883492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 156883493 . G . PASS END=156883493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 156883494 . C . PASS END=156883526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:18,0 chr1 156883527 . T . PASS END=156883527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 156883528 . G . PASS END=156883552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,584:0,48,255:17,0 chr1 156883644 . G . PASS END=156883695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,476:0,42,255:16,0 chr1 156883696 . G . PASS END=156883696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 156883697 . A . PASS END=156883716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 156883717 . G . PASS END=156883717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 156883718 . G . PASS END=156883722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:17,0 chr1 156883723 . G . PASS END=156883723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 156883724 . C . PASS END=156883741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,615:0,48,255:17,0 chr1 156883742 . C . PASS END=156883742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 156883743 . C . PASS END=156883756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 156883757 . T . PASS END=156883757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 156883758 . A . PASS END=156883758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156883759 . C . PASS END=156883759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr1 156883760 . A . PASS END=156883766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156883767 . T . PASS END=156883767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 156883768 . G . PASS END=156883769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 156883770 . A . PASS END=156883770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 156883771 . A . PASS END=156883775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 156883776 . C . PASS END=156883786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 156883787 . T . PASS END=156883787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:10,0 chr1 156883788 . C . PASS END=156883806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 156883807 . T . PASS END=156883815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,398:0,36,255:12,0 chr1 156883816 . G . PASS END=156883816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 156883817 . G . PASS END=156883817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 156883818 . A . PASS END=156883818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 156883819 . C . PASS END=156883825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 156883826 . A . PASS END=156883826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 156883827 . G . PASS END=156883830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156883831 . G . PASS END=156883831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156883832 . C . PASS END=156883832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr1 156883833 . G . PASS END=156883834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156883835 . C . PASS END=156883835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156883836 . A . PASS END=156883840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 156883841 . C . LowGQ END=156883841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,257:37,0,255:9,0 chr1 156883842 . A . PASS END=156883845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 156883846 . A . PASS END=156883846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 156883847 . C . PASS END=156883849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 156883850 . A . PASS END=156883850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 156883851 . G . PASS END=156883851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:6,0 chr1 156883852 . A . PASS END=156883853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 156883854 . A . PASS END=156883855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:6,0 chr1 156883856 . A . PASS END=156883856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 156883857 . G . PASS END=156883875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:10:6:0,10,225:0,10,186:6,0 chr1 156883876 . C . PASS END=156883881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:5,0 chr1 156883882 . C . LowGQ END=156883892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,135:0,0,140:4,0 chr1 156884439 . A . PASS END=156884454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 156884455 . C . PASS END=156884455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 156884456 . T . PASS END=156884456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156884457 . C . PASS END=156884459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156884460 . A . PASS END=156884461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156884462 . C . PASS END=156884464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 156884465 . C . PASS END=156884465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 156884466 . C . PASS END=156884493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,895:0,62,255:26,0 chr1 156884494 . C . PASS END=156884499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 156884500 . C . PASS END=156884503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,865:0,45,255:27,0 chr1 156884504 . C . PASS END=156884507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 156884508 . A . PASS END=156884511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 156884512 . C . PASS END=156884512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 156884513 . A . PASS END=156884515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 156884516 . C . PASS END=156884517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156884518 . C . PASS END=156884541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:28:0,81,1148:0,82,255:31,0 chr1 156884542 . T . PASS END=156884542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 156884543 . C . PASS END=156884546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 156884547 . T . PASS END=156884550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 156884551 . G . PASS END=156884583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:25,0 chr1 156884584 . C T, 49.85 PASS DP=25;MQ=249.84;MQRankSum=3.508;ReadPosRankSum=2.529;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:9,5,0:4,7,0:47:85,0,47,185,185,185:255,0,255:10,0:4.9847e+01,8.8531e-05,5.0000e+01,1.8462e+02,2.1939e+02,1.8763e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,8,6,6:7,6,5,7 chr1 156884585 . C . PASS END=156884586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:20,0 chr1 156884587 . T . PASS END=156884588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,853:0,58,255:19,0 chr1 156884589 . G . PASS END=156884589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:19,0 chr1 156884590 . A . PASS END=156884590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156885491 . T . PASS END=156885491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 156890596 . A . PASS END=156890601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 156890602 . A . PASS END=156890610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 156890611 . A . PASS END=156890611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 156890612 . G . PASS END=156890627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 156890628 . A . PASS END=156890634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 156890635 . G . PASS END=156890662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:17,0 chr1 156890663 . C . PASS END=156890663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 156890664 . T . PASS END=156890668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 156890669 . C . PASS END=156890669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 156890670 . G . PASS END=156890671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 156890672 . T C, 49.45 PASS DP=16;MQ=248.34;MQRankSum=3.281;ReadPosRankSum=3.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,7,0:0.438,0.000:16:4,4,0:5,3,0:48:84,0,50,250,314,564:223,0,255:9,0:4.9454e+01,7.0928e-05,5.3000e+01,2.5031e+02,3.4871e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,3,1,6:5,4,2,5 chr1 156890673 . G . PASS END=156890680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 156890681 . A . PASS END=156890681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 156890682 . G . PASS END=156890701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:16,0 chr1 156890702 . A . PASS END=156890702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,487:0,31,255:15,0 chr1 156890703 . G . PASS END=156890706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,566:0,48,255:16,0 chr1 156890707 . C . PASS END=156890707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 156890708 . C . PASS END=156890709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 156890710 . G . PASS END=156890713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 156890714 . C . PASS END=156890725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:13:0,35,540:0,35,255:13,0 chr1 156890726 . C . PASS END=156890726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 156890727 . C . PASS END=156890732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 156890733 . G . PASS END=156890733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 156890734 . G . PASS END=156890734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 156890735 . A . PASS END=156890735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 156890736 . G . PASS END=156890736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 156890737 . G . PASS END=156890739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 156890740 . G . PASS END=156890743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:11:0,20,405:0,20,255:9,0 chr1 156890744 . C . PASS END=156890745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 156890746 . A . PASS END=156890748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:8,0 chr1 156890749 . A . PASS END=156890755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:13:10:0,13,225:0,13,255:6,0 chr1 156891403 . A . PASS END=156891453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,2:77:99:67:0,120,1800:0,154,255:40,0 chr1 156891454 . A . PASS END=156891481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:64:0,120,1800:0,129,255:40,1 chr1 156893741 . A . PASS END=156893743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:17,0 chr1 156893744 . A . PASS END=156893744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 156893745 . G . PASS END=156893759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 156893760 . G . PASS END=156893760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 156893761 . G . PASS END=156893766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 156893767 . G . PASS END=156893770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156893771 . C . PASS END=156893775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156893776 . T . PASS END=156893776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 156893777 . T . PASS END=156893791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:24,0 chr1 156893792 . C . PASS END=156893793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 156893794 . C . PASS END=156893813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 156893814 . C . PASS END=156893824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 156893825 . T . PASS END=156893827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:36:20:0,36,540:0,44,255:13,0 chr1 156893828 . A . PASS END=156893832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156893833 . C . PASS END=156893836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 156893837 . G . PASS END=156893844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156893845 . C . PASS END=156893846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156893847 . G . PASS END=156893847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:11,0 chr1 156893848 . C . PASS END=156893858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 156893859 . C . PASS END=156893867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156893868 . T . PASS END=156893868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr1 156893869 . T . PASS END=156893869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 156893870 . T . PASS END=156893870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 156893871 . G . PASS END=156893876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 156893877 . A . PASS END=156893877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 156893878 . A . LowGQ END=156893878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:5,0 chr1 156893879 . A . PASS END=156893883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:6,0 chr1 156893884 . A . LowGQ END=156893884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,247:12,0,255:4,0 chr1 156893885 . C . PASS END=156893890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,241:5,0 chr1 156894216 . A . PASS END=156894216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,850:0,67,255:27,0 chr1 156894217 . C . PASS END=156894219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:29,0 chr1 156894220 . T . PASS END=156894220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:28,0 chr1 156894221 . C . PASS END=156894235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr1 156894236 . T . PASS END=156894236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 156894237 . C . PASS END=156894247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1186:0,93,255:33,0 chr1 156894248 . A . PASS END=156894248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 156894249 . A . PASS END=156894264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1158:0,86,255:34,0 chr1 156894265 . A . PASS END=156894265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,937:0,68,255:32,0 chr1 156894266 . T . PASS END=156894309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1194:0,83,255:34,0 chr1 156894310 . G . PASS END=156894312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1092:0,74,255:26,0 chr1 156894313 . C . PASS END=156894322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 156894323 . G . PASS END=156894331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 156894332 . A . PASS END=156894338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 156894339 . T . PASS END=156894344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 156894435 . G . PASS END=156894503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:36:0,85,1305:0,85,255:40,0 chr1 156894504 . C . PASS END=156894504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr1 156894505 . C . PASS END=156894506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156894507 . T . PASS END=156894510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1124:0,77,255:26,0 chr1 156894730 . C . PASS END=156894787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1233:0,86,255:34,0 chr1 156894788 . C . PASS END=156894793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 156894794 . T . PASS END=156894794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr1 156894795 . C . PASS END=156894800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 156894801 . C . PASS END=156894807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 156896315 . A . PASS END=156896323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1260:0,107,255:37,0 chr1 156896324 . T . PASS END=156896328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,111,255:29,0 chr1 156896329 . A . PASS END=156896332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:35:0,78,1170:0,105,255:26,0 chr1 156896977 . A . PASS END=156897062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,143,255:40,0 chr1 156897288 . G . PASS END=156897292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,505:0,45,255:15,0 chr1 156897293 . C . PASS END=156897293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 156897294 . G . PASS END=156897294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 156897295 . C . PASS END=156897295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:14,0 chr1 156897296 . A . PASS END=156897297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 156897298 . T . PASS END=156897298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 156897299 . T . PASS END=156897307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,537:0,48,255:17,0 chr1 156897308 . G . PASS END=156897308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 156897309 . G . PASS END=156897309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156897310 . A . PASS END=156897310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 156897311 . A . PASS END=156897311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 156897312 . C . PASS END=156897314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156897315 . T . PASS END=156897315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,600:0,15,255:18,0 chr1 156897316 . A . PASS END=156897316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:19,0 chr1 156897317 . A . PASS END=156897318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156897319 . A . PASS END=156897321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156897322 . G . PASS END=156897322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:18,0 chr1 156897323 . A . PASS END=156897323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156897324 . C . PASS END=156897324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156897325 . G . PASS END=156897325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 156897326 . A . PASS END=156897329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156897330 . C . PASS END=156897330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156897331 . G . PASS END=156897333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,790:0,50,255:19,0 chr1 156897334 . G . PASS END=156897349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 156897350 . A . PASS END=156897350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 156897351 . G . PASS END=156897351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 156897352 . G . PASS END=156897354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 156897355 . C . PASS END=156897367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,995:0,81,255:29,0 chr1 156897368 . A . PASS END=156897389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:24:0,71,908:0,71,255:26,0 chr1 156897390 . C . PASS END=156897391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156897392 . C . PASS END=156897404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 156897405 . T . PASS END=156897405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr1 156897406 . T . PASS END=156897413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,886:0,61,255:26,0 chr1 156897414 . C . PASS END=156897421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 156897422 . A . PASS END=156897422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,895:0,45,255:27,0 chr1 156897423 . C . PASS END=156897423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 156897424 . G . PASS END=156897427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 156897428 . G . PASS END=156897428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 156897429 . C . PASS END=156897429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156897430 . G . PASS END=156897440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,964:0,70,255:26,0 chr1 156897441 . C . PASS END=156897441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:23,0 chr1 156897442 . G . PASS END=156897447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:24,0 chr1 156897525 . G . PASS END=156897525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156897526 . G . PASS END=156897526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 156897527 . C . PASS END=156897552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 156897553 . G . PASS END=156897553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:19,0 chr1 156897554 . G . PASS END=156897603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:22,0 chr1 156897604 . C . PASS END=156897607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 156897608 . G . PASS END=156897608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156897707 . G . PASS END=156897713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr1 156897714 . G . PASS END=156897714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 156897715 . C . PASS END=156897718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 156897719 . T . PASS END=156897719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 156897720 . T . PASS END=156897737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,666:0,54,255:18,0 chr1 156897738 . A . PASS END=156897738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 156897739 . A . PASS END=156897775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr1 156897776 . A . PASS END=156897776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 156897777 . C . PASS END=156897796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr1 156899024 . G . PASS END=156899034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:24,0 chr1 156899035 . G . PASS END=156899065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,962:0,81,255:35,0 chr1 156899072 . C . PASS END=156899212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:36:0,94,1296:0,94,255:40,0 chr1 156899213 . A . PASS END=156899213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:34,0 chr1 156899214 . A . PASS END=156899221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1349:0,108,255:36,0 chr1 156899428 . G . PASS END=156899443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1107:0,86,255:34,0 chr1 156899444 . A . PASS END=156899444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1130:0,74,255:33,0 chr1 156899445 . G . PASS END=156899489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:36,0 chr1 156899490 . G . PASS END=156899495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:73:30:0,73,1001:0,73,255:26,0 chr1 156899496 . A . PASS END=156899498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156899499 . T . PASS END=156899509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1030:0,68,255:26,0 chr1 156899510 . C . PASS END=156899521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:21:0,45,675:0,59,255:18,0 chr1 156900321 . A . PASS END=156900409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1222:0,84,255:40,0 chr1 156901705 . C . PASS END=156901819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,120,1800:0,124,255:40,0 chr1 156902216 . G . PASS END=156902221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 156902222 . G A, 31.20 PASS DP=21;MQ=250.00;MQRankSum=3.000;ReadPosRankSum=1.926;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,4,0:0.190,0.000:21:7,3,0:10,1,0:31:66,0,50,143,600,743:92,0,255:15,0:3.1197e+01,3.3198e-03,5.3003e+01,1.4304e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,3,1:9,8,4,0 chr1 156902223 . C . PASS END=156902224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 156902225 . T . PASS END=156902226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 156902227 . A . PASS END=156902227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 156902228 . C . PASS END=156902228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 156902229 . A . PASS END=156902231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 156902232 . G . PASS END=156902241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:31,0 chr1 156902242 . G . PASS END=156902242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 156902243 . A . PASS END=156902258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1156:0,89,255:32,0 chr1 156902259 . G A, 42.36 PASS DP=35;MQ=249.64;MQRankSum=4.778;ReadPosRankSum=-0.156;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,12,0:0.343,0.000:35:10,4,0:13,8,0:42:77,0,50,425,815,1240:255,0,255:20,0:4.2362e+01,2.7388e-04,5.3000e+01,4.2517e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,9,3:13,10,5,7:156902259 chr1 156902260 . G . PASS END=156902280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1333:0,98,255:39,0 chr1 156902281 . T G, 39.40 PASS DP=40;MQ=250.00;MQRankSum=5.053;ReadPosRankSum=2.628;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:27,13,0:0.325,0.000:40:10,4,0:17,9,0:39:74,0,50,465,958,1423:255,0,255:26,0:3.9397e+01,5.2086e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,8,5:14,13,7,6:156902259 chr1 156902282 . C . PASS END=156902318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1311:0,92,255:39,0 chr1 156902319 . G . PASS END=156902330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1350:0,93,255:31,0 chr1 156902331 . C . PASS END=156902331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 156902332 . C . PASS END=156902337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 156902645 . A . PASS END=156902647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 156902648 . A . PASS END=156902648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr1 156902649 . A . PASS END=156902650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156902651 . T . PASS END=156902652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 156902653 . C . PASS END=156902656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 156902657 . G . PASS END=156902657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 156902658 . C . PASS END=156902658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156902659 . C . PASS END=156902659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 156902660 . C . PASS END=156902665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 156902666 . T . PASS END=156902666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 156902667 . G . PASS END=156902734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1205:0,83,255:37,0 chr1 156902735 . G . PASS END=156902760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 156902761 . G . PASS END=156902761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 156905792 . T . PASS END=156905834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1266:0,95,255:38,0 chr1 156905835 . A . PASS END=156905835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:34,0 chr1 156905836 . G . PASS END=156905850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1327:0,105,255:35,0 chr1 156906608 . C . PASS END=156906615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,894:0,72,255:25,0 chr1 156906616 . G . PASS END=156906616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 156906617 . G . PASS END=156906619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr1 156906620 . A . PASS END=156906629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1041:0,84,255:29,0 chr1 156906630 . T . PASS END=156906630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:28,0 chr1 156906631 . T . PASS END=156906633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 156906634 . T . PASS END=156906634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 156906635 . G . PASS END=156906669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1143:0,88,255:35,0 chr1 156906670 . G . PASS END=156906670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr1 156906671 . C . PASS END=156906719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1221:0,94,255:36,0 chr1 156906720 . A . PASS END=156906720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:33,0 chr1 156906721 . C . PASS END=156906733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,88,255:34,0 chr1 156906734 . T . PASS END=156906736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:33:0,75,1125:0,85,255:26,0 chr1 156906737 . T . PASS END=156906738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 156906739 . C . PASS END=156906771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,831:0,66,255:25,0 chr1 156906772 . A . PASS END=156906772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:20,0 chr1 156906773 . G . PASS END=156906773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 156906774 . C . PASS END=156906797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,559:0,45,255:19,0 chr1 156907041 . C . PASS END=156907080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,519:0,42,255:18,0 chr1 156907081 . T C, 49.09 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=2.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:5,5,0:6,3,0:48:84,0,50,286,365,651:253,0,255:11,0:4.9088e+01,7.5329e-05,5.3000e+01,2.8613e+02,3.9944e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,5,3:7,4,4,4 chr1 156907082 . G . PASS END=156907085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 156907086 . G . PASS END=156907091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 156907092 . G . PASS END=156907092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 156907093 . C . PASS END=156907095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 156907096 . A . PASS END=156907096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 156907097 . C . PASS END=156907102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 156907103 . T . PASS END=156907105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156907106 . G . PASS END=156907115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 156907116 . T . PASS END=156907116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,2 chr1 156907117 . G . PASS END=156907117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,775:0,3,255:20,2 chr1 156907118 . G . PASS END=156907118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 156907119 . A . PASS END=156907121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156907122 . A . PASS END=156907122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:19,0 chr1 156907123 . G . PASS END=156907125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156907126 . C . PASS END=156907126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 156907127 . G . PASS END=156907145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 156907146 . A . PASS END=156907146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 156907147 . T . PASS END=156907148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 156907149 . G . PASS END=156907149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 156907150 . T . PASS END=156907153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 156907154 . C . PASS END=156907154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 156907155 . T . PASS END=156907159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 156907160 . G . PASS END=156907160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 156907161 . C . PASS END=156907161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 156907162 . A . PASS END=156907202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,665:0,41,255:18,0 chr1 156907203 . A . PASS END=156907213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr1 156907214 . G . PASS END=156907220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 156907221 . G . PASS END=156907239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 156907240 . G C, 49.87 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=-0.722;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:6,3,0:3,5,0:48:85,0,50,286,322,608:255,0,255:9,0:4.9873e+01,6.6527e-05,5.3000e+01,2.8604e+02,3.5665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,3,2,6:7,2,5,3 chr1 156907241 . T . PASS END=156907244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 156907245 . T . PASS END=156907258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 156907259 . C . PASS END=156907259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 156907260 . T . PASS END=156907261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 156907262 . A . PASS END=156907277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,349:0,27,255:9,0 chr1 156907278 . A . PASS END=156907281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 156907282 . C . PASS END=156907282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 156907283 . A . PASS END=156907288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 156908210 . C . PASS END=156908228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,933:0,75,255:26,0 chr1 156908229 . T . PASS END=156908233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 156908234 . C . PASS END=156908234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 156908235 . T . PASS END=156908235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 156908236 . T . PASS END=156908236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 156908237 . C . PASS END=156908237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 156908238 . A . PASS END=156908238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 156908239 . G . PASS END=156908244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156908245 . C . PASS END=156908260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,984:0,65,255:25,0 chr1 156908261 . C . PASS END=156908262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 156908263 . C . PASS END=156908271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:26:0,60,900:0,62,255:23,0 chr1 156908272 . A . PASS END=156908272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 156908273 . G . PASS END=156908282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 156908283 . A . PASS END=156908283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 156908284 . A . PASS END=156908289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 156908290 . C . PASS END=156908290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 156908291 . T . PASS END=156908291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 156908292 . G . PASS END=156908292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 156908293 . C . PASS END=156908294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 156908295 . T . PASS END=156908305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:17,0 chr1 156909340 . C . PASS END=156909340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 156909341 . T . PASS END=156909352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,864:0,72,255:26,0 chr1 156909353 . T . PASS END=156909356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 156909357 . T . PASS END=156909357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr1 156909358 . A . PASS END=156909361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:30,0 chr1 156909362 . T . PASS END=156909362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 156909363 . C . PASS END=156909363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 156909364 . C . PASS END=156909364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 156909365 . T . PASS END=156909365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 156909366 . G . PASS END=156909366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,1022:0,29,255:28,0 chr1 156909367 . C . PASS END=156909367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 156909368 . T . PASS END=156909368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 156909369 . G . PASS END=156909397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1141:0,84,255:38,0 chr1 156909398 . A . PASS END=156909398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1382:0,49,255:36,0 chr1 156909399 . T . PASS END=156909402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1604:0,113,255:40,0 chr1 156909403 . T . PASS END=156909403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1441:0,79,255:39,0 chr1 156909404 . G . PASS END=156909533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1349:0,87,255:40,0 chr1 156909534 . T . PASS END=156909534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1205:0,77,255:33,0 chr1 156909535 . C . PASS END=156909555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1233:0,86,255:33,0 chr1 156909556 . C . PASS END=156909556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:32,0 chr1 156909557 . T . PASS END=156909654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1211:0,86,255:40,0 chr1 156909655 . T . PASS END=156909657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:30,0 chr1 156909658 . G . PASS END=156909662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1205:0,91,255:31,0 chr1 156909663 . G . PASS END=156909663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr1 156909664 . G . PASS END=156909666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 156909667 . G . PASS END=156909667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 156909668 . C . PASS END=156909677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 156909678 . A . PASS END=156909679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 156909680 . G . PASS END=156909683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156909684 . A . PASS END=156909685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 156909686 . A . PASS END=156909686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 156909687 . T . PASS END=156909687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 156909688 . G . PASS END=156909688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156909689 . T . PASS END=156909689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 156909690 . C . PASS END=156909690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 156909691 . G . PASS END=156909691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 156909692 . C . PASS END=156909694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,919:0,67,255:26,0 chr1 156909695 . G A, 50.00 PASS DP=28;MQ=248.93;MQRankSum=3.837;ReadPosRankSum=2.274;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:7,7,0:7,7,0:48:85,0,50,501,493,993:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,4,10:10,4,7,7 chr1 156909696 . T . PASS END=156909702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 156909999 . C . PASS END=156910000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:29,0 chr1 156910001 . T . PASS END=156910001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:27,0 chr1 156910002 . C . PASS END=156910015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1048:0,87,255:30,0 chr1 156910016 . T . PASS END=156910016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 156910017 . C . PASS END=156910034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1086:0,90,255:31,0 chr1 156910035 . A . PASS END=156910035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 156910036 . C . PASS END=156910071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1130:0,86,255:34,0 chr1 156910072 . T . PASS END=156910072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1170:0,63,255:26,0 chr1 156910073 . G . PASS END=156910073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 156910074 . T . PASS END=156910102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 156910103 . G . PASS END=156910103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156910104 . A . PASS END=156910107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 156910108 . G . PASS END=156910122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 156910123 . G . PASS END=156910125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 156910126 . A . PASS END=156910130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 156910131 . G . PASS END=156910133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 156910134 . C . PASS END=156910139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 156910140 . C . PASS END=156910168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:24:0,62,914:0,62,255:26,0 chr1 156910169 . T . PASS END=156910169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr1 156910170 . C . PASS END=156910177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 156910178 . A . PASS END=156910203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr1 156910204 . C . PASS END=156910204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 156910205 . T . PASS END=156910205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156910206 . G . PASS END=156910208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,540:0,34,255:13,0 chr1 156910209 . A . PASS END=156910217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 156910847 . T . PASS END=156910849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:45:25:0,45,675:0,59,255:16,0 chr1 156911164 . C . PASS END=156911225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,144,255:40,0 chr1 156911656 . C . PASS END=156911667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,459:0,36,255:13,0 chr1 156911668 . G . PASS END=156911683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr1 156911684 . G . PASS END=156911684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr1 156911685 . C . PASS END=156911754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,627:0,51,255:18,0 chr1 156911755 . A . PASS END=156911755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 156911756 . C . PASS END=156911771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 156911772 . C . PASS END=156911772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 156911773 . T . PASS END=156911776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 156911777 . T . PASS END=156911777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 156911778 . C . PASS END=156911781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 156912482 . G . PASS END=156912572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,117,1560:0,117,255:40,0 chr1 156913727 . C . PASS END=156913872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,993:0,82,255:40,0 chr1 156913873 . T . PASS END=156913877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 156913878 . C . PASS END=156913881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 156913882 . A . PASS END=156913883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 156913884 . C . PASS END=156913886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 156913887 . G . PASS END=156913894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:24,0 chr1 156914150 . C . PASS END=156914193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:34:0,91,1205:0,91,255:40,0 chr1 156914194 . T . PASS END=156914217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:41:0,81,1215:0,107,255:39,0 chr1 156914218 . T . PASS END=156914225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:72:42:0,72,1080:0,126,255:26,0 chr1 156914811 . C . PASS END=156914813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr1 156914814 . G . PASS END=156914815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 156914816 . A . PASS END=156914816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:20:0,26,499:0,26,255:18,0 chr1 156914817 . C . PASS END=156914828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 156914829 . G . PASS END=156914829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 156914830 . G . PASS END=156914831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 156914832 . G . PASS END=156914832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 156914833 . T . PASS END=156914841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:23,0 chr1 156914842 . C . PASS END=156914843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,836:0,53,255:23,0 chr1 156914844 . C . PASS END=156914855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr1 156914856 . G . PASS END=156914856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 156914857 . G . PASS END=156914865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1147:0,90,255:30,0 chr1 156914866 . C . PASS END=156914866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 156914867 . G . PASS END=156914892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1148:0,83,255:31,0 chr1 156914893 . C . PASS END=156914893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:29,0 chr1 156914894 . G . PASS END=156914912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 156914913 . C . PASS END=156914917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156914918 . C . PASS END=156914918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 156914919 . A . PASS END=156914953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,848:0,61,255:26,0 chr1 156914954 . G . PASS END=156914979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 156914980 . G . PASS END=156914980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 156914981 . A . PASS END=156914981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 156914982 . G . PASS END=156914984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:17:0,38,585:0,38,255:15,0 chr1 156914985 . G . PASS END=156914989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 156915837 . C . PASS END=156915837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:19,0 chr1 156915838 . C . PASS END=156915847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:23,0 chr1 156915848 . T . PASS END=156915848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 156915849 . T . PASS END=156915868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:26,0 chr1 156915869 . A . PASS END=156915872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 156915873 . G . PASS END=156915873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 156915874 . G . PASS END=156915901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,979:0,81,255:29,0 chr1 156915902 . A . PASS END=156915902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:28,0 chr1 156915903 . T . PASS END=156915906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 156915907 . G . PASS END=156915932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 156915933 . A . PASS END=156915933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:21,0 chr1 156915934 . C . PASS END=156915947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:22,0 chr1 156915948 . C . PASS END=156915948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 156915949 . A . PASS END=156915949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 156915950 . G . PASS END=156915954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 156916454 . C . PASS END=156916454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:35:44:0,35,1280:0,35,255:39,0 chr1 156916455 . T . PASS END=156916456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:44:0,82,1390:0,82,255:40,0 chr1 156916457 . C . LowGQ END=156916457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,8:44:0:44:0,0,1152:23,0,255:35,0 chr1 156916458 . A . PASS END=156916458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1327:0,66,255:39,0 chr1 156916459 . T . PASS END=156916459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,115,1515:0,115,255:40,0 chr1 156916460 . G . PASS END=156916460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:21:45:0,21,1227:0,21,255:38,0 chr1 156916461 . A . PASS END=156916461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 156916462 . A . PASS END=156916462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:38:46:0,38,1205:0,38,255:39,0 chr1 156916463 . G . PASS END=156916463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,127,255:40,0 chr1 156916464 . A . PASS END=156916464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,8:48:11:48:0,11,1103:0,11,255:39,0 chr1 156916465 . G . PASS END=156916465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 156916466 . C . PASS END=156916467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:25:47:0,25,1263:0,25,255:40,0 chr1 156916468 . G . PASS END=156916468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:93:48:0,93,1397:0,93,255:40,0 chr1 156916469 . G . LowGQ END=156916469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,9:48:0:48:0,0,1177:6,0,255:39,0 chr1 156916470 . A . PASS END=156916470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 156916471 . A . LowGQ END=156916471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,16:49:0:49:0,0,828:163,0,255:32,0 chr1 156916472 . T . PASS END=156916522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,135,255:40,0 chr1 156916523 . A . PASS END=156916579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,109,1760:0,109,255:40,0 chr1 156916728 . C . PASS END=156916807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:29:0,82,1086:0,82,255:33,0 chr1 156917096 . T . PASS END=156917113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1119:0,93,255:32,0 chr1 156917114 . C . PASS END=156917114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 156917115 . A . PASS END=156917115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr1 156917116 . G . PASS END=156917130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:32,0 chr1 156917131 . A . PASS END=156917131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:31,0 chr1 156917132 . G . PASS END=156917136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr1 156917137 . G . PASS END=156917137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:31,0 chr1 156917138 . C . PASS END=156917195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1132:0,83,255:33,0 chr1 156917196 . C . PASS END=156917198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 156917199 . G . PASS END=156917199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 156917200 . A . PASS END=156917213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:27:0,66,990:0,81,255:26,0 chr1 156917214 . C . PASS END=156917238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,630:0,41,255:19,0 chr1 156917239 . A . PASS END=156917239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 156917240 . G . PASS END=156917242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 156917561 . C . PASS END=156917582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 156917583 . A . PASS END=156917583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 156917584 . A . PASS END=156917594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:26,0 chr1 156917595 . G . PASS END=156917620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,994:0,80,255:34,0 chr1 156917621 . C . PASS END=156917621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 156917622 . C . PASS END=156917697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1215:0,80,255:36,0 chr1 156917698 . T . PASS END=156917712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 156917713 . T . PASS END=156917732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 156917733 . G . PASS END=156917733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 156917734 . G . PASS END=156917746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:14,0 chr1 156917747 . T . PASS END=156917748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 156917973 . C . PASS END=156918020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,110,1374:0,110,255:40,0 chr1 156918111 . C . PASS END=156918111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 156918112 . T . PASS END=156918112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:31,0 chr1 156918113 . G . PASS END=156918119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1379:0,95,255:36,0 chr1 156918120 . A . PASS END=156918120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1226:0,59,255:35,0 chr1 156918121 . G . PASS END=156918179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1371:0,84,255:40,0 chr1 156918180 . A . PASS END=156918180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:33,0 chr1 156918181 . T . PASS END=156918198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1180:0,83,255:34,0 chr1 156918199 . A . PASS END=156918199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:30,0 chr1 156918200 . G . PASS END=156918223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1200:0,83,255:35,0 chr1 156918224 . A . PASS END=156918224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 156918225 . G . PASS END=156918278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1139:0,80,255:37,0 chr1 156918279 . T . PASS END=156918279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:28,0 chr1 156918280 . C . PASS END=156918293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1123:0,80,255:29,0 chr1 156918294 . G . PASS END=156918311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,925:0,67,255:26,0 chr1 156918365 . C . PASS END=156918383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 156918384 . A . PASS END=156918386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156918387 . C . PASS END=156918394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 156918395 . C . PASS END=156918400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156918401 . G . PASS END=156918404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156918405 . T . PASS END=156918405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156918406 . C . PASS END=156918406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 156918407 . C . PASS END=156918408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 156918409 . C . PASS END=156918413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 156918414 . A . PASS END=156918414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 156918415 . C . PASS END=156918417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 156921365 . C . PASS END=156921491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:37:0,96,1386:0,101,255:40,0 chr1 156924684 . C . PASS END=156924713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:95:0,120,1800:0,234,255:40,0 chr1 156925495 . T . PASS END=156925594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:60:0,120,1800:0,180,255:40,0 chr1 156926212 . C . PASS END=156926341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:29:0,83,1100:0,83,255:40,0 chr1 156926342 . A . PASS END=156926356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:23,0 chr1 156927584 . C . PASS END=156927607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,173,255:40,0 chr1 156928534 . A . PASS END=156928534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 156928535 . A . PASS END=156928565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:29,0 chr1 156928566 . A . PASS END=156928566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr1 156928567 . G . PASS END=156928656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1078:0,82,255:36,0 chr1 156928838 . C . PASS END=156928928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1189:0,87,255:39,0 chr1 156928929 . G . PASS END=156928934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:25,0 chr1 156930210 . C . PASS END=156930252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,213,255:40,0 chr1 156931469 . C . PASS END=156931567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,113,1778:0,113,255:40,0 chr1 156932995 . C . PASS END=156933095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,102,1543:0,102,255:40,0 chr1 156933096 . T . PASS END=156933096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1427:0,60,255:35,0 chr1 156933312 . C . PASS END=156933321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,117,1755:0,120,255:40,0 chr1 156933322 . A . PASS END=156933322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1476:0,77,255:40,0 chr1 156933323 . A . PASS END=156933386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:40:0,95,1292:0,95,255:40,0 chr1 156937779 . C . PASS END=156937788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 156937789 . G . PASS END=156937828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1057:0,87,255:29,0 chr1 156937829 . G . PASS END=156937831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 156937832 . G . PASS END=156937878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1196:0,83,255:36,0 chr1 156937879 . C . PASS END=156937892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,953:0,62,255:26,0 chr1 156937893 . T . PASS END=156937896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156937897 . G . PASS END=156937909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 156937910 . T . PASS END=156937910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:21,0 chr1 156937911 . C . PASS END=156937916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:23,0 chr1 156939074 . C . PASS END=156939080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,892:0,69,255:25,0 chr1 156939081 . A . PASS END=156939081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 156939082 . G . PASS END=156939083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 156939084 . G . PASS END=156939104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:29,0 chr1 156939105 . G . PASS END=156939132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1169:0,80,255:32,0 chr1 156939133 . A . PASS END=156939137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 156939138 . A . PASS END=156939143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:23,0 chr1 156939144 . A . PASS END=156939144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,832:0,51,255:23,0 chr1 156939145 . G . PASS END=156939150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,953:0,62,255:24,0 chr1 156939790 . C . PASS END=156939835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1440:0,87,255:40,0 chr1 156941489 . C . PASS END=156941501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:26,0 chr1 156941502 . G . PASS END=156941506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 156941507 . C . PASS END=156941513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 156941514 . A . PASS END=156941532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1133:0,84,255:30,0 chr1 156941533 . T . PASS END=156941533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 156941534 . G . PASS END=156941584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1155:0,89,255:35,0 chr1 156941585 . C . PASS END=156941604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:25,0 chr1 156941605 . T . PASS END=156941608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,806:0,53,255:18,0 chr1 156946775 . C . PASS END=156946846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,129,255:40,0 chr1 156947996 . C . PASS END=156948140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1143:0,81,255:40,0 chr1 156948141 . G . PASS END=156948141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1083:0,74,255:31,0 chr1 156948142 . A . PASS END=156948142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 156948143 . G . PASS END=156948143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1077:0,74,255:29,0 chr1 156948144 . C . PASS END=156948157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:31,0 chr1 156948158 . T . PASS END=156948174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:24:0,66,990:0,72,255:23,0 chr1 156949021 . A . PASS END=156949069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:38:0,81,1219:0,81,255:40,0 chr1 156949070 . G . PASS END=156949071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:70:39:0,70,1349:0,70,255:36,0 chr1 156949072 . C . PASS END=156949072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1410:0,98,255:36,0 chr1 156949073 . G . PASS END=156949073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:36,0 chr1 156949074 . T . PASS END=156949078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1364:0,98,255:37,0 chr1 156950229 . T . PASS END=156950278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:37:0,90,1350:0,110,255:40,0 chr1 156954131 . C . PASS END=156954229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:37:0,82,1457:0,82,255:40,0 chr1 156955874 . C . PASS END=156955939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,111,1482:0,114,255:40,0 chr1 156955940 . C . PASS END=156955940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:38,0 chr1 156955941 . T . PASS END=156955964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,87,255:38,0 chr1 156955965 . C . PASS END=156955965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 156956291 . C . PASS END=156956298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:90:0,120,1800:0,255,255:40,0 chr1 156956299 . A . PASS END=156956305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:95:0,120,1800:0,255,255:40,0 chr1 156957502 . C . PASS END=156957534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,114,1698:0,114,255:40,0 chr1 157014091 . C . PASS END=157014122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,155,255:40,0 chr1 157016188 . C . PASS END=157016207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:18:0,33,495:0,54,255:12,0 chr1 157062441 . T . PASS END=157062448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,682:0,57,255:19,0 chr1 157062449 . G . PASS END=157062465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,892:0,63,255:25,0 chr1 157062466 . G . PASS END=157062475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,865:0,81,255:27,0 chr1 157062476 . T . PASS END=157062476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,945:0,32,255:27,0 chr1 157062477 . C . PASS END=157062548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1097:0,83,255:36,0 chr1 157062549 . G . PASS END=157062561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1045:0,71,255:26,0 chr1 157062562 . C . PASS END=157062567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 157062568 . G . PASS END=157062568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 157062569 . C . PASS END=157062573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 157062574 . A . PASS END=157062621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 157062622 . A . PASS END=157062627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 157062628 . A . PASS END=157062629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157062630 . C . PASS END=157062631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 157062632 . T . PASS END=157062636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 157062637 . C . PASS END=157062639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 157062640 . G . PASS END=157062641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 157062642 . A . PASS END=157062642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157062643 . C . PASS END=157062653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 157062654 . C . PASS END=157062655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157062656 . C . PASS END=157062658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157062659 . C . PASS END=157062669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 157062670 . A . PASS END=157062670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 157062671 . G . PASS END=157062695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr1 157062696 . G T, 46.46 PASS DP=26;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=2.556;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,10,0:0.385,0.000:26:10,1,0:6,9,0:46:81,0,50,299,572,871:255,0,255:14,0:4.6456e+01,1.1985e-04,5.3000e+01,2.9875e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,6,4:11,5,5,5 chr1 157062697 . A . PASS END=157062698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 157062699 . G . PASS END=157062701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 157062702 . C . PASS END=157062709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 157062710 . C . PASS END=157062710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 157062711 . T . PASS END=157062720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:23,0 chr1 157062721 . A . PASS END=157062721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 157062722 . T . PASS END=157062733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 157062734 . A . PASS END=157062774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:24,0 chr1 157062775 . A . PASS END=157062775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,868:0,48,255:23,0 chr1 157062776 . A . PASS END=157062790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,923:0,64,255:24,0 chr1 157062791 . A . PASS END=157062791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 157062792 . G . PASS END=157062794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 157062795 . C . PASS END=157062795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 157062796 . C . PASS END=157062798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 157062799 . T . PASS END=157062799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,852:0,44,255:21,0 chr1 157062800 . T . PASS END=157062830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,839:0,65,255:26,0 chr1 157062831 . G . PASS END=157062834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 157062835 . G . PASS END=157062836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157062837 . G . PASS END=157062837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157062838 . G . PASS END=157062838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:26,0 chr1 157062839 . C . PASS END=157062844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157062845 . C . PASS END=157062845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 157062846 . A . PASS END=157062846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 157062847 . G . PASS END=157062847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157062848 . G . PASS END=157062850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157062851 . G . PASS END=157062861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 157062862 . A . PASS END=157062864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157062865 . C . PASS END=157062878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:25,0 chr1 157062879 . G . PASS END=157062879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 157062880 . C . PASS END=157062895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 157062896 . A . PASS END=157062914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:18,0 chr1 157062915 . A . PASS END=157062919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:11,0 chr1 157067660 . G . PASS END=157067752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1241:0,84,255:40,0 chr1 157067753 . G . PASS END=157067753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:32,0 chr1 157067754 . A . PASS END=157067778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1202:0,86,255:34,0 chr1 157067779 . A . PASS END=157067779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1070:0,49,255:27,0 chr1 157067780 . G . PASS END=157067780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 157068498 . C . PASS END=157068515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,919:0,78,255:26,0 chr1 157068516 . G . PASS END=157068535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1055:0,84,255:40,0 chr1 157068536 . A . PASS END=157068536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1289:0,65,255:38,0 chr1 157068537 . C . PASS END=157068669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:36:0,90,1350:0,104,255:40,1 chr1 157068670 . C . PASS END=157068670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:29,0 chr1 157068671 . T . PASS END=157068684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1178:0,83,255:30,0 chr1 157068685 . T . PASS END=157068685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 157068686 . A . PASS END=157068687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:28,0 chr1 157068933 . C . PASS END=157068958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:24,0 chr1 157068959 . A . PASS END=157068959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 157068960 . T . PASS END=157068970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,925:0,72,255:25,0 chr1 157068971 . T . PASS END=157068971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,738:0,42,255:22,0 chr1 157068972 . T . PASS END=157068989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:24,0 chr1 157068990 . C . PASS END=157068990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 157068991 . A . PASS END=157069001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 157069002 . A . PASS END=157069003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157069004 . C . PASS END=157069004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157069005 . T . PASS END=157069010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 157069011 . G . PASS END=157069011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 157069012 . G . PASS END=157069083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1125:0,83,255:37,0 chr1 157069084 . G . PASS END=157069084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 157069085 . C . PASS END=157069116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:33:0,94,1263:0,94,255:36,0 chr1 157069117 . G . PASS END=157069150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:33,0 chr1 157069151 . C . PASS END=157069152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 157069153 . A . PASS END=157069153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 157069154 . A G, 48.91 PASS DP=32;MQ=197.75;MQRankSum=0.703;ReadPosRankSum=1.576;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:10,6,0:8,8,0:47:84,0,50,500,619,1120:255,0,255:15,0:4.8912e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,14,7,7:6,12,9,5 chr1 157069155 . T . PASS END=157069170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 157069258 . C . PASS END=157069260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 157069261 . A C, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.937;ReadPosRankSum=2.236;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,14,0:0.609,0.000:23:4,8,0:5,6,0:47:85,0,48,501,322,823:255,0,255:9,0:5.0000e+01,8.1024e-05,5.0622e+01,4.5000e+02,3.5670e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,7,7:8,1,5,9 chr1 157069262 . G . PASS END=157069272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr1 157069273 . C . PASS END=157069273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 157069274 . G . PASS END=157069284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 157069285 . G . PASS END=157069285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 157069286 . G . PASS END=157069298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,861:0,66,255:23,0 chr1 157069299 . A . PASS END=157069309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,831:0,69,255:23,0 chr1 157069310 . G . PASS END=157069315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 157094633 . C . PASS END=157094638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,673:0,41,255:19,0 chr1 157094639 . A . PASS END=157094639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 157094640 . T . PASS END=157094640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 157094641 . C . PASS END=157094641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 157094642 . A . PASS END=157094644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 157094645 . A . PASS END=157094645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 157094646 . G . PASS END=157094649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 157094650 . C . PASS END=157094650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:20,0 chr1 157094651 . T . PASS END=157094652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 157094653 . T . PASS END=157094653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 157094654 . T . PASS END=157094657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 157094658 . A . PASS END=157094658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 157094659 . A . PASS END=157094666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:23,0 chr1 157094667 . G . PASS END=157094667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 157094668 . G . PASS END=157094691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,935:0,84,255:29,0 chr1 157094692 . T . PASS END=157094692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 157094693 . G . PASS END=157094704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 157094705 . C . PASS END=157094706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 157094707 . G . PASS END=157094718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1003:0,87,255:29,0 chr1 157094719 . C . PASS END=157094719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 157094720 . A . PASS END=157094720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 157094721 . G . PASS END=157094721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 157094722 . G . PASS END=157094726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 157094727 . T . PASS END=157094739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,972:0,71,255:26,0 chr1 157094740 . G . PASS END=157094741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157094742 . T . PASS END=157094742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:24,0 chr1 157094743 . T . PASS END=157094748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:26,0 chr1 157094749 . G . PASS END=157094749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,900:0,37,255:23,0 chr1 157094750 . A . PASS END=157094753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1024:0,71,255:27,0 chr1 157094754 . T . PASS END=157094759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:28,0 chr1 157094760 . G . PASS END=157094760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157094761 . G . PASS END=157094761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr1 157094762 . C . PASS END=157094768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1147:0,80,255:30,0 chr1 157094769 . G . PASS END=157094773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,920:0,60,255:28,0 chr1 157094774 . T . PASS END=157094774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1015:0,38,255:28,0 chr1 157094775 . T . PASS END=157094775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,987:0,62,255:29,0 chr1 157094776 . C . PASS END=157094776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 157094777 . T . PASS END=157094777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 157094778 . T . PASS END=157094778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 157094779 . T . PASS END=157094779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,998:0,43,255:25,0 chr1 157094780 . C . PASS END=157094780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 157094781 . T . PASS END=157094789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,1000:0,70,255:26,0 chr1 157094790 . G . PASS END=157094790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:24,0 chr1 157094791 . C . PASS END=157094793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:25,0 chr1 157094794 . T . PASS END=157094794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,815:0,23,255:23,0 chr1 157094795 . G . PASS END=157094806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:23,0 chr1 157094807 . A . PASS END=157094807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 157094808 . G . PASS END=157094811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:23,0 chr1 157094812 . T . PASS END=157094812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:22,0 chr1 157094813 . A . PASS END=157094823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,939:0,65,255:26,0 chr1 157094824 . C . PASS END=157094824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157094825 . T . PASS END=157094825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 157094826 . T . PASS END=157094830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 157094831 . C . PASS END=157094839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:26,0 chr1 157094840 . A . PASS END=157094840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:21,0 chr1 157094841 . G . PASS END=157094871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,61,255:24,0 chr1 157094872 . A . PASS END=157094872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 157094873 . G . PASS END=157094898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,876:0,66,255:23,0 chr1 157094899 . G . PASS END=157094899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 157094900 . G . PASS END=157094906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 157094907 . A . PASS END=157094907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 157094908 . T . PASS END=157094920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr1 157094921 . C . PASS END=157094922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 157094923 . C . PASS END=157094942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:23,0 chr1 157094943 . A . PASS END=157094943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 157094944 . C . PASS END=157094947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 157094948 . G . PASS END=157094948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 157094949 . C . PASS END=157094951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 157094952 . T . PASS END=157094952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 157094953 . C . PASS END=157095019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,868:0,61,255:26,0 chr1 157095020 . A . PASS END=157095020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 157095021 . G . PASS END=157095032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 157095033 . A . PASS END=157095039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 157095040 . G . PASS END=157095044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157095045 . A . PASS END=157095046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 157095047 . A . PASS END=157095047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr1 157095048 . G . PASS END=157095053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 157095054 . A . PASS END=157095054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 157095055 . T . PASS END=157095133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1233:0,86,255:35,0 chr1 157095134 . C . PASS END=157095134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 157095135 . A . PASS END=157095261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1094:0,90,255:40,0 chr1 157095262 . A . PASS END=157095262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 157095263 . A . PASS END=157095263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157095264 . T . PASS END=157095264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 157095265 . G . PASS END=157095269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157095270 . T . PASS END=157095270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 157095271 . A . PASS END=157095271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 157095272 . G . PASS END=157095272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 157095273 . T . PASS END=157095275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1050:0,90,255:30,0 chr1 157095276 . T . PASS END=157095276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr1 157095277 . T . PASS END=157095280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 157095281 . T . PASS END=157095281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 157095282 . T . PASS END=157095319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1064:0,82,255:37,0 chr1 157095320 . A . PASS END=157095320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:43:41:0,43,1286:0,43,255:30,0 chr1 157095321 . G . PASS END=157095584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1147:0,84,255:40,0 chr1 157095585 . T . PASS END=157095585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1386:0,65,255:35,0 chr1 157095586 . C . PASS END=157095620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:37,0 chr1 157095621 . C . PASS END=157095631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:29:0,66,990:0,77,255:25,0 chr1 157095632 . C . PASS END=157095636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1072:0,87,255:29,0 chr1 157095637 . G . PASS END=157095637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 157095638 . G . PASS END=157095645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,959:0,87,255:29,0 chr1 157095646 . C . PASS END=157095657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:27:0,73,1041:0,73,255:26,0 chr1 157095658 . T . PASS END=157095658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:26,0 chr1 157095659 . A . PASS END=157095659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 157095660 . G . PASS END=157095660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 157095661 . C . PASS END=157095677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:32,0 chr1 157095678 . T . PASS END=157095678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:30,0 chr1 157095679 . G . PASS END=157095680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 157095681 . A . PASS END=157095681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:31,0 chr1 157095682 . C . PASS END=157095692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr1 157095693 . G . PASS END=157095693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 157095694 . G . PASS END=157095733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:32,0 chr1 157095734 . G . PASS END=157095734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 157095735 . G . PASS END=157095736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 157095737 . T . PASS END=157095738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 157095739 . T . PASS END=157095739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157095740 . T . PASS END=157095741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 157095742 . G . PASS END=157095742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157095743 . C . PASS END=157095743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 157095744 . A . PASS END=157095753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1141:0,90,255:30,0 chr1 157095754 . C . PASS END=157095754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 157095755 . A . PASS END=157095755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157095756 . C . PASS END=157095756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 157095757 . T . PASS END=157095757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:26,0 chr1 157095758 . C . PASS END=157095771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr1 157103872 . T . PASS END=157104019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:52:0,112,1800:0,112,255:40,0 chr1 157105263 . C . PASS END=157105286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,570:0,51,255:17,0 chr1 157105287 . T . PASS END=157105287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr1 157105288 . A . PASS END=157105321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 157105322 . G . PASS END=157105330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 157105331 . C . PASS END=157105331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 157105332 . A . PASS END=157105336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 157105337 . A . PASS END=157105337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 157105338 . T . PASS END=157105342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 157105343 . A . PASS END=157105343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 157105344 . T . PASS END=157105346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,886:0,69,255:24,0 chr1 157105347 . T . PASS END=157105348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 157105349 . G . PASS END=157105357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,856:0,72,255:24,0 chr1 157105358 . T . PASS END=157105358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 157105359 . T . PASS END=157105364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 157105365 . T . PASS END=157105365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 157105366 . A . PASS END=157105370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 157105371 . C . PASS END=157105371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 157105372 . C . PASS END=157105399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 157105400 . C . PASS END=157105402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 157105403 . T . PASS END=157105403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 157105404 . T . PASS END=157105434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1033:0,84,255:31,0 chr1 157105435 . A . PASS END=157105435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 157105436 . C . PASS END=157105452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1111:0,90,255:30,0 chr1 157105453 . A . PASS END=157105453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 157105454 . G . PASS END=157105467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 157105468 . C . PASS END=157105498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:25,0 chr1 157105499 . C . PASS END=157105499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 157105500 . C . PASS END=157105500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 157106099 . C . PASS END=157106144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:40:0,90,1441:0,90,255:40,0 chr1 157485392 . T . PASS END=157485523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,118,1800:0,118,255:40,1 chr1 157485524 . C . PASS END=157485554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,138,255:40,0 chr1 157485632 . C . PASS END=157485634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:30,0 chr1 157485635 . G . PASS END=157485635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:28,0 chr1 157485636 . T . PASS END=157485643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1161:0,80,255:30,0 chr1 157485644 . A . PASS END=157485644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 157485645 . T . PASS END=157485645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157485646 . G . PASS END=157485646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 157485647 . C . PASS END=157485652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 157485653 . G . PASS END=157485653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 157485654 . T . PASS END=157485655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157485656 . A . PASS END=157485656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 157485657 . G . PASS END=157485660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 157485661 . C . PASS END=157485661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 157485662 . C . PASS END=157485662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 157485663 . A . PASS END=157485663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157488219 . C . PASS END=157488287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:64:0,120,1800:0,178,255:40,0 chr1 157488490 . C . PASS END=157488490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1067:0,17,255:30,0 chr1 157488491 . A . PASS END=157488491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:32,0 chr1 157488492 . T . PASS END=157488492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1175:0,69,255:30,0 chr1 157488493 . T . PASS END=157488493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1155:0,36,255:28,0 chr1 157488494 . A . PASS END=157488524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:41:0,87,1390:0,87,255:40,0 chr1 157488525 . G . PASS END=157488572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1255:0,86,255:40,0 chr1 157489533 . C . PASS END=157489534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 157489535 . G A, 50.00 PASS DP=47;MQ=249.11;MQRankSum=5.220;ReadPosRankSum=2.144;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,31,0:0.660,0.000:47:8,15,0:8,16,0:43:85,0,41,1072,556,1628:255,0,255:16,0:5.0000e+01,2.0968e-04,4.4173e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,16,15:11,5,16,15 chr1 157489536 . G . PASS END=157489560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,114,1773:0,114,255:40,0 chr1 157490221 . C . PASS END=157490223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 157490224 . C . PASS END=157490224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 157490225 . T . PASS END=157490227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 157490228 . T . PASS END=157490228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 157490229 . C . PASS END=157490238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,648:0,60,255:21,0 chr1 157490239 . A . PASS END=157490239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 157490240 . G . PASS END=157490242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 157490243 . G . PASS END=157490243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 157490244 . T . PASS END=157490245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 157490246 . G . PASS END=157490247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157490248 . G . PASS END=157490248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 157490249 . C . PASS END=157490259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1056:0,87,255:29,0 chr1 157490260 . C . PASS END=157490260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:29,0 chr1 157490261 . C . PASS END=157490261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1006:0,35,255:28,0 chr1 157490262 . G . PASS END=157490263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 157490264 . A . PASS END=157490264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:29,0 chr1 157490265 . G . PASS END=157490265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 157490266 . C . PASS END=157490269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr1 157490270 . G . PASS END=157490270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 157490271 . C . PASS END=157490271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 157490272 . C . PASS END=157490274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1164:0,60,255:30,0 chr1 157490275 . C . PASS END=157490279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:31,0 chr1 157490280 . C . PASS END=157490283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:60:33:0,60,1172:0,60,255:35,0 chr1 157490284 . G . PASS END=157490284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 157490285 . C . PASS END=157490286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1288:0,69,255:34,0 chr1 157490287 . G . PASS END=157490287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 157490288 . G . PASS END=157490288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:33,0 chr1 157490289 . C . PASS END=157490351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,989:0,81,255:35,0 chr1 157490807 . C . PASS END=157490810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 157490811 . G . PASS END=157490812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 157490813 . T . PASS END=157490824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 157490825 . C . PASS END=157490826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 157490827 . G . PASS END=157490839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 157490840 . G . PASS END=157490840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 157490841 . G . PASS END=157490849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 157490850 . G . PASS END=157490850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 157490851 . C . PASS END=157490860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,637:0,48,255:17,0 chr1 157490861 . C . PASS END=157490864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:16,0 chr1 157490865 . A . PASS END=157490865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 157490866 . C . PASS END=157490879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:18,0 chr1 157490880 . A . PASS END=157490880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:13,0 chr1 157490881 . G . PASS END=157490884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 157490885 . G . PASS END=157490925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:19,0 chr1 157490926 . G . PASS END=157490932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,744:0,63,255:21,0 chr1 157490933 . A . PASS END=157490938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 157490939 . T . PASS END=157490941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 157490942 . C . PASS END=157490959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:18:0,40,605:0,40,255:19,0 chr1 157490960 . G . PASS END=157490960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 157490961 . A . PASS END=157490973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,637:0,54,255:18,0 chr1 157490974 . A . PASS END=157490977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 157490978 . T . PASS END=157490986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,582:0,48,255:16,0 chr1 157490987 . A . PASS END=157490990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 157490991 . T . PASS END=157491005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr1 157491006 . G . PASS END=157491006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 157491007 . T . PASS END=157491008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 157491009 . A . PASS END=157491009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 157491010 . A . PASS END=157491029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 157491030 . C . PASS END=157491030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 157491031 . G . PASS END=157491040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 157491041 . T . PASS END=157491061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 157491062 . G . PASS END=157491077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 157491078 . C . PASS END=157491082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 157494028 . T . PASS END=157494030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 157494031 . G . PASS END=157494031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 157494032 . T . PASS END=157494032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 157494033 . T . PASS END=157494052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,886:0,61,255:25,0 chr1 157494053 . G . PASS END=157494056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 157494057 . G . PASS END=157494057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:26,0 chr1 157494058 . G . PASS END=157494081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1078:0,87,255:30,0 chr1 157494082 . T . PASS END=157494082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 157494083 . G . PASS END=157494086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 157494087 . C . PASS END=157494092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1046:0,77,255:26,0 chr1 157494093 . C . PASS END=157494095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 157494096 . T . PASS END=157494097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1048:0,63,255:26,0 chr1 157494098 . C . PASS END=157494098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157494099 . G . PASS END=157494103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 157494104 . G . PASS END=157494104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:23,0 chr1 157494105 . C . PASS END=157494113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,925:0,64,255:24,0 chr1 157494114 . C . PASS END=157494114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 157494115 . A . PASS END=157494116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 157494117 . T . PASS END=157494117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 157494118 . G . PASS END=157494121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 157494122 . G . PASS END=157494122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 157494123 . C . PASS END=157494124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 157494125 . T . PASS END=157494125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 157494126 . C . PASS END=157494127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 157494128 . C . PASS END=157494136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 157494137 . A . PASS END=157494142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 157494143 . G . PASS END=157494143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 157494144 . A . PASS END=157494148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 157494149 . T . PASS END=157494149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:19,0 chr1 157494150 . C . PASS END=157494161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,738:0,63,255:23,0 chr1 157494162 . A . PASS END=157494164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,746:0,52,255:19,0 chr1 157494165 . G . PASS END=157494166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 157494167 . T . PASS END=157494167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:19,0 chr1 157494168 . T . PASS END=157494168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 157494169 . G . PASS END=157494184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,720:0,42,255:19,0 chr1 157494185 . C . PASS END=157494187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 157494188 . G . PASS END=157494188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 157494189 . A . PASS END=157494189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 157494190 . G . PASS END=157494215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,713:0,44,255:19,0 chr1 157494216 . C . PASS END=157494221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:20,0 chr1 157494222 . C . PASS END=157494239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,729:0,54,255:19,0 chr1 157494240 . G . PASS END=157494240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 157494241 . G . PASS END=157494262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,613:0,40,255:19,0 chr1 157494263 . G . PASS END=157494280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,744:0,60,255:21,0 chr1 157494281 . A . PASS END=157494281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 157494282 . G . PASS END=157494285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 157494286 . G . PASS END=157494326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,50,255:19,0 chr1 157494327 . G . PASS END=157494347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 157497407 . C . PASS END=157497412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 157497413 . C . PASS END=157497418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 157497419 . G . PASS END=157497434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:13,0 chr1 157497435 . G . PASS END=157497447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 157497448 . A . PASS END=157497452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 157497453 . A . PASS END=157497453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 157497454 . T . PASS END=157497466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 157497467 . A . PASS END=157497471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 157497472 . T . PASS END=157497472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:18,0 chr1 157497473 . A . PASS END=157497489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 157497490 . G . PASS END=157497529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:25,0 chr1 157497530 . G . PASS END=157497558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:29,0 chr1 157497559 . T . PASS END=157497561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 157497562 . T . PASS END=157497565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157497566 . A . PASS END=157497569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:25,0 chr1 157497570 . C . PASS END=157497570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157497571 . C . PASS END=157497589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 157497590 . A . PASS END=157497590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr1 157497591 . G . PASS END=157497598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 157497599 . G . PASS END=157497599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 157497600 . G . PASS END=157497609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 157497610 . T . PASS END=157497610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 157497611 . G . PASS END=157497624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,817:0,69,255:23,0 chr1 157497625 . T . PASS END=157497625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 157497626 . C . PASS END=157497626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 157497627 . C . PASS END=157497657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr1 157497658 . A . PASS END=157497662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 157497663 . G . PASS END=157497663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 157497664 . A . PASS END=157497665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 157497666 . G . PASS END=157497667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 157497668 . T . PASS END=157497685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,474:0,39,255:13,0 chr1 157504306 . T . PASS END=157504306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 157504307 . T . PASS END=157504307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,2 chr1 157504308 . A . LowGQ END=157504308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,582:12,0,255:16,2 chr1 157504309 . G . PASS END=157504309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 157504310 . G . PASS END=157504315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 157504316 . A . PASS END=157504331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:24,0 chr1 157504332 . A . PASS END=157504332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,627:0,55,255:23,0 chr1 157504333 . C . PASS END=157504338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,824:0,72,255:24,0 chr1 157504339 . T . PASS END=157504339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 157504340 . T . PASS END=157504361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,846:0,62,255:26,0 chr1 157504362 . A . PASS END=157504362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,909:0,45,255:26,0 chr1 157504363 . C . PASS END=157504363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157504364 . T . PASS END=157504365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157504366 . A . PASS END=157504366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 157504367 . G . PASS END=157504367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 157504368 . C . PASS END=157504378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 157504379 . T . PASS END=157504416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:26,0 chr1 157504417 . G . PASS END=157504500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1109:0,83,255:33,0 chr1 157504501 . G . PASS END=157504511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 157504512 . C . PASS END=157504512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157504513 . T . PASS END=157504513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 157504514 . C . PASS END=157504557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1139:0,80,255:33,0 chr1 157504558 . A . PASS END=157504558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 157504559 . T . PASS END=157504561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 157504562 . T . PASS END=157504562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 157504563 . A . PASS END=157504566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 157504567 . C . PASS END=157504568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157504569 . G . PASS END=157504578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 157504579 . T . PASS END=157504579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:28,0 chr1 157504580 . T . PASS END=157504590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1172:0,93,255:32,0 chr1 157504591 . T . PASS END=157504591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:29,0 chr1 157504592 . C . PASS END=157504599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 157504600 . T . PASS END=157504600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr1 157504601 . T . PASS END=157504601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157504602 . C . PASS END=157504602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 157504603 . A . PASS END=157504608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157504609 . A . PASS END=157504609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:27,0 chr1 157504610 . A . PASS END=157504615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 157504616 . A . PASS END=157504616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 157504617 . C . PASS END=157504621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 157504622 . G . PASS END=157504622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 157504623 . C . PASS END=157504623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:27,0 chr1 157504624 . T . PASS END=157504637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 157504638 . G . PASS END=157504650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1041:0,71,255:26,0 chr1 157504651 . G . PASS END=157504651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:22,0 chr1 157504652 . C . PASS END=157504659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,62,255:22,0 chr1 157504660 . G . PASS END=157504682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:18,0 chr1 157508876 . C . PASS END=157508881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 157508882 . C T, 50.00 PASS DP=13;MQ=199.40;MQRankSum=2.262;ReadPosRankSum=-0.566;FractionInformativeReads=0.846;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,8,0:0.727,0.000:11:2,2,0:1,6,0:45:85,0,44,286,107,393:255,0,111:4,0:5.0000e+01,1.3461e-04,4.6780e+01,2.8617e+02,1.4206e+02,3.9646e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,1,5,3:1,2,3,5 chr1 157508883 . G . PASS END=157508887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 157508888 . G . PASS END=157508888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:10,0 chr1 157508889 . G . PASS END=157508895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:12,0 chr1 157508896 . G . PASS END=157508896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 157508897 . C . PASS END=157508897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 157508898 . C . PASS END=157508911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:16,0 chr1 157508912 . G . PASS END=157508912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 157508913 . G . PASS END=157508919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,643:0,51,255:17,0 chr1 157508920 . C . PASS END=157508923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 157508924 . T . PASS END=157508924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 157508925 . G . PASS END=157508947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,637:0,44,255:18,0 chr1 157508948 . C . PASS END=157508948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 157508949 . T . PASS END=157508959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 157508960 . C . PASS END=157508960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr1 157508961 . A . PASS END=157508965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 157508966 . G . PASS END=157508966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 157508967 . A . PASS END=157508975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,684:0,57,255:19,0 chr1 157508976 . G . PASS END=157508981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 157508982 . C . PASS END=157508987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 157508988 . T . PASS END=157509024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 157509025 . C T, 50.00 PASS DP=19;MQ=232.98;MQRankSum=-0.784;ReadPosRankSum=3.592;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,11,0:0.579,0.000:19:2,5,0:6,6,0:48:85,0,49,365,286,651:255,0,253:8,0:5.0000e+01,7.0152e-05,5.2088e+01,3.6455e+02,3.2086e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,4,7:5,3,6,5 chr1 157509026 . C . PASS END=157509056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 157509057 . T . PASS END=157509057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 157509058 . G . PASS END=157509062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 157509063 . T . PASS END=157509063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr1 157509064 . C . PASS END=157509077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,660:0,54,255:18,0 chr1 157509078 . G . PASS END=157509078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 157509079 . T . PASS END=157509080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 157509081 . A . PASS END=157509103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,466:0,39,255:13,0 chr1 157509104 . A . PASS END=157509104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 157509105 . A . PASS END=157509110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,427:0,39,255:13,0 chr1 157509111 . G . PASS END=157509111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 157509112 . T . PASS END=157509112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 157509113 . C . PASS END=157509123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 157509124 . C . PASS END=157509126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 157509127 . A . PASS END=157509129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 157509130 . T . PASS END=157509130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 157509131 . T . PASS END=157509138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 157509139 . G . PASS END=157509139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 157509140 . G . PASS END=157509154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,266:0,24,255:8,0 chr1 157512649 . C . PASS END=157512660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 157512661 . G . PASS END=157512690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,775:0,60,255:26,0 chr1 157512691 . G . PASS END=157512695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157512696 . T . PASS END=157512704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 157512705 . G . PASS END=157512910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1147:0,80,255:40,0 chr1 157512911 . A . PASS END=157512912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:25,0 chr1 157512913 . G . PASS END=157512917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:37:0,87,1305:0,98,255:30,0 chr1 157512918 . G . PASS END=157512927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1062:0,74,255:26,0 chr1 157514052 . T . PASS END=157514054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 157514055 . G . PASS END=157514055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 157514056 . C . PASS END=157514061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 157514062 . T . PASS END=157514062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 157514063 . A . PASS END=157514076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 157514077 . G . PASS END=157514079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 157514080 . G . PASS END=157514093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:26,0 chr1 157514094 . T . PASS END=157514094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:25,0 chr1 157514095 . G . PASS END=157514095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157514096 . T . PASS END=157514096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:24,0 chr1 157514097 . A . PASS END=157514110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,903:0,62,255:26,0 chr1 157514111 . G . PASS END=157514113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 157514114 . T . PASS END=157514114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 157514115 . T . PASS END=157514115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:25,0 chr1 157514116 . A . PASS END=157514126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 157514127 . A . PASS END=157514127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr1 157514128 . C . PASS END=157514136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 157514137 . T . PASS END=157514137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:25,0 chr1 157514138 . T . PASS END=157514166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 157514167 . C . PASS END=157514168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 157514169 . G . PASS END=157514169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 157514170 . G . PASS END=157514171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 157514172 . A . PASS END=157514172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:26,0 chr1 157514173 . G . PASS END=157514230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:26,0 chr1 157514231 . A . PASS END=157514234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 157514235 . C . PASS END=157514238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 157514239 . C . PASS END=157514241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 157514242 . C . PASS END=157514248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 157514249 . G . PASS END=157514265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,746:0,52,255:19,0 chr1 157514266 . G . PASS END=157514272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 157514273 . G . PASS END=157514336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,605:0,40,255:19,0 chr1 157514621 . C . PASS END=157514629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:35,0 chr1 157514630 . G . PASS END=157514630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 157514631 . G . PASS END=157514708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:36:0,81,1339:0,81,255:40,0 chr1 157514709 . A . PASS END=157514709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,7:66:67:66:0,67,1751:0,67,255:40,0 chr1 157514710 . C . PASS END=157514854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:80:33:0,80,1202:0,80,255:40,0 chr1 157514855 . C . PASS END=157514855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 157514856 . T . PASS END=157514858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 157514859 . C . PASS END=157514872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,848:0,64,255:26,0 chr1 157516733 . C . PASS END=157516755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,885:0,75,255:26,0 chr1 157516756 . G . PASS END=157516837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:35:0,84,1288:0,84,255:40,0 chr1 157516838 . T . LowGQ END=157516838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,9:55:0:55:0,0,1476:28,0,255:40,0 chr1 157516839 . T . PASS END=157516962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:31:0,90,1157:0,93,255:40,0 chr1 157516963 . A . PASS END=157516963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 157516964 . A . PASS END=157516966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 157516967 . T . PASS END=157516967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr1 157516968 . A . PASS END=157516982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1082:0,82,255:30,0 chr1 157516983 . C . PASS END=157516983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157516984 . C . PASS END=157516984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:25,0 chr1 157516985 . T . PASS END=157516987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157519350 . C . PASS END=157519370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,155,255:40,0 chr1 157522122 . C . PASS END=157522152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1318:0,102,255:35,0 chr1 157545314 . T . PASS END=157545400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:37:0,84,1344:0,84,255:40,0 chr1 157545489 . C . PASS END=157545520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,146,255:40,0 chr1 157548264 . C . PASS END=157548332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,166,255:40,0 chr1 157548560 . C . PASS END=157548631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1258:0,89,255:40,0 chr1 157548632 . C . PASS END=157548642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:31,0 chr1 157550111 . C . PASS END=157550138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:34:0,88,1174:0,88,255:37,0 chr1 157551321 . C . PASS END=157551431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,81,255:40,0 chr1 157551432 . T . PASS END=157551434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:32:0,69,1035:0,79,255:24,0 chr1 157555958 . C . PASS END=157555970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:16,0 chr1 157555971 . A . PASS END=157555971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 157555972 . T . PASS END=157555994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:19,0 chr1 157555995 . G . PASS END=157556001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 157556002 . C . PASS END=157556002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 157556003 . T . PASS END=157556011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:22,0 chr1 157556012 . C . PASS END=157556013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 157556014 . G . PASS END=157556017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 157556018 . A . PASS END=157556018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 157556019 . G . PASS END=157556028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,917:0,64,255:25,0 chr1 157556029 . C . PASS END=157556039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 157556040 . C . PASS END=157556063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,939:0,75,255:26,0 chr1 157556064 . C . PASS END=157556064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157556065 . T . PASS END=157556106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,881:0,62,255:26,0 chr1 157556107 . T . PASS END=157556107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:20,0 chr1 157556108 . G . PASS END=157556118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 157556119 . C . PASS END=157556119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 157556120 . G . PASS END=157556127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 157556128 . G . PASS END=157556128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 157556129 . A . PASS END=157556130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 157556131 . A . PASS END=157556131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:21,0 chr1 157556132 . A . PASS END=157556133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 157556134 . G . PASS END=157556148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:19:0,51,714:0,53,255:19,0 chr1 157556149 . C . PASS END=157556158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:21,0 chr1 157556159 . C . PASS END=157556199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,576:0,50,255:18,0 chr1 157556200 . C . PASS END=157556211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:12,0 chr1 157556212 . T . PASS END=157556220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 157556221 . A . PASS END=157556221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 157556222 . G . PASS END=157556236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 157556237 . C . PASS END=157556242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 157556243 . T . PASS END=157556243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 157556244 . C . PASS END=157556244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 157556245 . C . PASS END=157556245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 157557066 . G . PASS END=157557068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:23,0 chr1 157557069 . G . PASS END=157557070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157557071 . A . PASS END=157557071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 157557072 . C . PASS END=157557072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157557073 . A . PASS END=157557073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:28,0 chr1 157557074 . T . PASS END=157557077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 157557078 . T . PASS END=157557078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr1 157557079 . C . PASS END=157557219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:30:0,83,1096:0,83,255:40,0 chr1 157557220 . T . PASS END=157557220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:32,0 chr1 157557221 . C . PASS END=157557243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1225:0,89,255:32,0 chr1 157557244 . G . PASS END=157557244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 157557245 . G . PASS END=157557255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:29,0 chr1 157557256 . C . PASS END=157557283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 157557284 . A . PASS END=157557284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 157557285 . G . PASS END=157557290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,83,255:26,0 chr1 157557291 . C . PASS END=157557311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 157557312 . G . PASS END=157557345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 157557346 . T . PASS END=157557350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,715:0,49,255:18,0 chr1 157557655 . C . PASS END=157557667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr1 157557668 . T . PASS END=157557668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 157557669 . A . PASS END=157557895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:82:32:0,82,1149:0,82,255:40,0 chr1 157557896 . C . PASS END=157557905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:39:29:0,39,585:0,70,255:13,0 chr1 157557906 . G . PASS END=157557908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:15,0 chr1 157557909 . T . PASS END=157557909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,473:0,1,255:14,0 chr1 157558994 . C . PASS END=157559000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr1 157559001 . A . PASS END=157559001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 157559002 . A . PASS END=157559004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 157559005 . A . PASS END=157559005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr1 157559006 . G . PASS END=157559012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr1 157559013 . C . PASS END=157559026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,729:0,60,255:26,0 chr1 157559027 . G . PASS END=157559208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1023:0,81,255:40,0 chr1 157559209 . C . PASS END=157559219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:28:0,71,1024:0,71,255:26,0 chr1 157559220 . G . PASS END=157559220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:23,0 chr1 157559221 . A . PASS END=157559246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,758:0,64,255:26,0 chr1 157559247 . T . PASS END=157559247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 157559248 . G . PASS END=157559248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 157566118 . C . PASS END=157566138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,167,255:40,0 chr1 157567704 . C . PASS END=157567713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1329:0,100,255:36,0 chr1 157567714 . C . PASS END=157567734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,102,1530:0,108,255:39,0 chr1 157646502 . C . PASS END=157646558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:96:0,120,1800:0,255,255:40,0 chr1 157648500 . C . PASS END=157648504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 157648505 . G . PASS END=157648510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,966:0,81,255:28,0 chr1 157648511 . A . PASS END=157648511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,850:0,67,255:27,0 chr1 157648512 . G . PASS END=157648521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1133:0,90,255:35,0 chr1 157648522 . A . PASS END=157648522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:44:39:0,44,986:0,44,255:31,0 chr1 157648523 . C . PASS END=157648646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:39:0,82,1318:0,82,255:40,0 chr1 157648732 . C . PASS END=157648763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,176,255:40,0 chr1 157650492 . C . PASS END=157650560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1730:0,120,255:40,0 chr1 157650771 . C . PASS END=157650889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1215:0,105,255:40,0 chr1 157653007 . C . PASS END=157653034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,158,255:40,0 chr1 157659588 . C . PASS END=157659591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 157659592 . T . PASS END=157659593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157659594 . T . PASS END=157659624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1133:0,80,255:37,0 chr1 157659625 . A . PASS END=157659625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 157659626 . G . PASS END=157659693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1227:0,90,255:40,0 chr1 157659694 . G . PASS END=157659694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 157659695 . T . PASS END=157659707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:29,0 chr1 157660045 . C . PASS END=157660045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 157660046 . T . PASS END=157660057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:22,0 chr1 157660058 . T . PASS END=157660058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 157660059 . G . PASS END=157660065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,813:0,66,255:22,0 chr1 157660066 . C . PASS END=157660067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:22,0 chr1 157660068 . T . PASS END=157660068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 157660069 . T . PASS END=157660069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 157660070 . A . PASS END=157660079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 157660080 . G . PASS END=157660080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 157660081 . C . PASS END=157660091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,992:0,78,255:26,0 chr1 157660092 . T . PASS END=157660092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 157660093 . T . PASS END=157660093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:27,0 chr1 157660094 . G . PASS END=157660295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:29:0,83,1141:0,83,255:40,0 chr1 157660296 . A . PASS END=157660323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 157665119 . C . PASS END=157665136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,607:0,54,255:18,0 chr1 157665137 . C . PASS END=157665151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:23,0 chr1 157665152 . G . PASS END=157665152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 157665153 . G . PASS END=157665176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,925:0,69,255:26,0 chr1 157665177 . A . PASS END=157665177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 157665178 . C . PASS END=157665180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 157665181 . G . PASS END=157665181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 157665182 . A . PASS END=157665192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 157665193 . G . PASS END=157665193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 157665194 . A . PASS END=157665194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,840:0,29,255:26,0 chr1 157665195 . A . PASS END=157665195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 157665196 . T . PASS END=157665196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 157665197 . G . PASS END=157665208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1031:0,84,255:28,0 chr1 157665209 . G . PASS END=157665209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,892:0,29,255:26,0 chr1 157665210 . A . PASS END=157665210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 157665211 . G . PASS END=157665211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 157665212 . A . PASS END=157665213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr1 157665214 . A . PASS END=157665214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:28,0 chr1 157665215 . G . PASS END=157665226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:31,0 chr1 157665227 . C . PASS END=157665227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 157665228 . T . PASS END=157665236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1141:0,93,255:32,0 chr1 157665237 . A . PASS END=157665240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:26,0 chr1 157665241 . G . PASS END=157665249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1215:0,89,255:30,0 chr1 157665250 . C . PASS END=157665250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr1 157665251 . T . PASS END=157665275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1186:0,83,255:31,0 chr1 157665276 . A . PASS END=157665315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr1 157665316 . T . PASS END=157665327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 157665328 . T . PASS END=157665328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 157665329 . C . PASS END=157665329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 157665330 . C . PASS END=157665330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 157665331 . A . PASS END=157665331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 157665332 . G . PASS END=157665333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 157665334 . A . PASS END=157665369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,582:0,45,255:19,0 chr1 157665370 . A . PASS END=157665380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 157665381 . A . PASS END=157665381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 157665382 . G . PASS END=157665382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 157665383 . G . PASS END=157665388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 157665389 . A . PASS END=157665389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:7,0 chr1 157665390 . T . PASS END=157665408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 157665409 . A . PASS END=157665409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 157665410 . A . PASS END=157665412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 157665830 . T . PASS END=157665832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,786:0,30,255:23,0 chr1 157665833 . T . PASS END=157665833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 157665834 . C . PASS END=157665834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 157665835 . A . PASS END=157665835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 157665836 . C . PASS END=157665837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 157665838 . G . PASS END=157665838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 157665839 . T . PASS END=157665839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 157665840 . G . PASS END=157665845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:28:0,48,1008:0,48,255:29,0 chr1 157665846 . A . PASS END=157665846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr1 157665847 . A . PASS END=157665848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 157665849 . C . PASS END=157665849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 157665850 . C . PASS END=157665850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 157665851 . A . PASS END=157665855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:30,0 chr1 157665856 . C . PASS END=157666075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1164:0,81,255:40,0 chr1 157666076 . C . PASS END=157666076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:29,0 chr1 157666077 . G . PASS END=157666083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:30,0 chr1 157666084 . C . PASS END=157666084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 157666085 . G . PASS END=157666117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,845:0,66,255:26,0 chr1 157666930 . T . PASS END=157667214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:33:0,90,1304:0,90,255:40,0 chr1 157667449 . C . PASS END=157667709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:86:39:0,86,1117:0,86,255:40,0 chr1 157668174 . C . PASS END=157668352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,110,1512:0,110,255:40,0 chr1 157668353 . A . PASS END=157668389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:37:0,81,1215:0,107,255:40,0 chr1 157668390 . T C, 42.36 PASS DP=35;MQ=250.00;MQRankSum=4.778;ReadPosRankSum=1.755;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,12,0:0.343,0.000:35:7,4,0:16,8,0:42:77,0,50,429,815,1244:255,0,255:19,0:4.2363e+01,2.7388e-04,5.3000e+01,4.2914e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,18,6,6:15,8,6,6 chr1 157668391 . G . PASS END=157668401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:28,0 chr1 157668402 . C . PASS END=157668419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 157669482 . C . PASS END=157669502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,129,255:40,0 chr1 157670249 . T . PASS END=157670279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,103,1673:0,103,255:40,0 chr1 157716452 . T . PASS END=157716462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1234:0,102,255:36,0 chr1 157716463 . T . PASS END=157716463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr1 157716464 . A . PASS END=157716590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:94:37:0,94,1252:0,94,255:40,0 chr1 157716661 . C . PASS END=157716664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1341:0,98,255:35,0 chr1 157716665 . T . PASS END=157716666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:38:0,78,1170:0,83,255:26,0 chr1 157716667 . C . PASS END=157716689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,906:0,89,255:31,0 chr1 157718343 . C . PASS END=157718408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,146,255:40,0 chr1 157718665 . C . PASS END=157718750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,110,1508:0,110,255:40,0 chr1 157719440 . C . PASS END=157719467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:93:0,120,1800:0,255,255:40,0 chr1 157736586 . C . PASS END=157736761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:87:40:0,87,1423:0,87,255:40,0 chr1 157737021 . C . PASS END=157737028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 157737029 . G . PASS END=157737034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 157737035 . G . PASS END=157737035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 157737036 . G . PASS END=157737036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 157737037 . C . PASS END=157737042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:17,0 chr1 157737043 . C . PASS END=157737043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 157737044 . T . PASS END=157737056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr1 157737057 . C . PASS END=157737068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 157737069 . T . PASS END=157737069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 157737070 . G . PASS END=157737072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 157737073 . G . PASS END=157737073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 157737074 . G . PASS END=157737085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:22,0 chr1 157737086 . T . PASS END=157737086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 157737087 . A . PASS END=157737088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 157737089 . T . PASS END=157737089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 157737090 . T . PASS END=157737124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:22,0 chr1 157737125 . G . PASS END=157737134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,782:0,50,255:19,0 chr1 157737135 . C . PASS END=157737152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,770:0,60,255:21,0 chr1 157737153 . T . PASS END=157737158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 157737159 . C . PASS END=157737159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 157737160 . A . PASS END=157737164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 157737165 . T . PASS END=157737165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 157737166 . G . PASS END=157737167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 157737168 . C . PASS END=157737168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 157737169 . A . PASS END=157737169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr1 157737170 . T . PASS END=157737183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 157737184 . T . PASS END=157737184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 157737185 . T . PASS END=157737195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 157737196 . T . PASS END=157737198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 157737199 . G . PASS END=157737203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 157737204 . A . PASS END=157737205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 157737206 . C . PASS END=157737229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,917:0,69,255:26,0 chr1 157737230 . T . PASS END=157737230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 157737231 . C . PASS END=157737237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,992:0,78,255:26,0 chr1 157737238 . G . PASS END=157737356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1205:0,89,255:36,0 chr1 157737357 . A . PASS END=157737357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,924:0,68,255:30,0 chr1 157737358 . C . PASS END=157737373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1233:0,86,255:33,0 chr1 157737374 . T . PASS END=157737381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,900:0,76,255:25,0 chr1 157737382 . G . PASS END=157737423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:18,0 chr1 157738204 . T . PASS END=157738216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr1 157738217 . A . PASS END=157738217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 157738218 . T . PASS END=157738218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 157738219 . T . PASS END=157738228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 157738229 . G . PASS END=157738246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:26,0 chr1 157738247 . G . PASS END=157738262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:31,0 chr1 157738263 . C . PASS END=157738263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 157738264 . A . PASS END=157738271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1075:0,80,255:32,0 chr1 157738272 . T . PASS END=157738272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:30,0 chr1 157738273 . T . PASS END=157738278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1143:0,96,255:32,0 chr1 157738279 . C . PASS END=157738279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,959:0,55,255:28,0 chr1 157738280 . A . PASS END=157738287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1146:0,88,255:30,0 chr1 157738288 . C . PASS END=157738288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr1 157738289 . T . PASS END=157738289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 157738290 . T . PASS END=157738290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:27,0 chr1 157738291 . T . PASS END=157738308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1094:0,80,255:30,0 chr1 157738309 . G . PASS END=157738309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 157738310 . C . PASS END=157738320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1094:0,90,255:30,0 chr1 157738321 . G . PASS END=157738321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 157738322 . G . PASS END=157738332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1095:0,93,255:31,0 chr1 157738333 . T . PASS END=157738334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 157738335 . T . PASS END=157738358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1139:0,80,255:34,0 chr1 157738359 . G . PASS END=157738360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 157738361 . C . PASS END=157738401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1101:0,80,255:32,0 chr1 157738402 . C . PASS END=157738402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:25,0 chr1 157738403 . C . PASS END=157738404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 157738405 . C . PASS END=157738409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 157738410 . C . PASS END=157738451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 157738452 . G . PASS END=157738462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 157738463 . C . PASS END=157738463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 157738464 . T . PASS END=157738485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 157738486 . G . PASS END=157738486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 157738487 . G . PASS END=157738491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 157739656 . T . PASS END=157739656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 157739657 . C . PASS END=157739657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 157739658 . T . PASS END=157739659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 157739660 . C . PASS END=157739666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 157739667 . A . PASS END=157739668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:24,0 chr1 157739669 . C . PASS END=157739680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 157739681 . G . PASS END=157739681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 157739682 . C . PASS END=157739692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,909:0,75,255:26,0 chr1 157739693 . G . PASS END=157739694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 157739695 . T . PASS END=157739695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 157739696 . C . PASS END=157739697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 157739698 . T . PASS END=157739700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 157739701 . G . PASS END=157739705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157739706 . A . PASS END=157739708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157739709 . G . PASS END=157739885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1133:0,82,255:40,0 chr1 157739886 . C . PASS END=157739939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:25:0,62,820:0,62,255:26,0 chr1 157739940 . T . PASS END=157739940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 157740199 . C . PASS END=157740209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:31,0 chr1 157740210 . A . PASS END=157740210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1033:0,62,255:30,0 chr1 157740211 . T . PASS END=157740219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1149:0,83,255:36,0 chr1 157740220 . T . PASS END=157740220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1255:0,56,255:35,0 chr1 157740221 . A . PASS END=157740317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:93:37:0,93,1254:0,93,255:40,0 chr1 157740318 . A . PASS END=157740318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1527:0,74,255:40,0 chr1 157740319 . A . PASS END=157740383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1147:0,80,255:40,0 chr1 157740384 . T . PASS END=157740384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 157740385 . G . PASS END=157740405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 157740406 . C . PASS END=157740412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:25,0 chr1 157740413 . G . PASS END=157740413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:24,0 chr1 157740414 . T . PASS END=157740440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,898:0,62,255:26,0 chr1 157740441 . A . PASS END=157740441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 157740442 . C . PASS END=157740442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 157740443 . A . PASS END=157740456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,682:0,44,255:19,0 chr1 157745565 . C . PASS END=157745585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,185,255:40,0 chr1 157746833 . C . PASS END=157746863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,183,255:40,0 chr1 157765889 . T . PASS END=157765960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,166,255:40,0 chr1 157766891 . C . PASS END=157766922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,185,255:40,0 chr1 157767537 . A . PASS END=157767610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:62:0,120,1800:0,179,255:40,0 chr1 157767658 . C . PASS END=157767729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,120,1800:0,144,255:40,0 chr1 157767951 . C . PASS END=157767962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,116,1612:0,116,255:40,0 chr1 157767963 . T . PASS END=157767999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,111,1653:0,111,255:40,0 chr1 157768000 . G C, 50.00 PASS DP=50;MQ=250.00;MQRankSum=6.010;ReadPosRankSum=-0.381;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,28,0:0.560,0.000:50:16,17,0:6,11,0:48:85,0,49,994,763,1756:255,0,255:22,0:5.0000e+01,7.2222e-05,5.1767e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,17,11:17,5,12,16 chr1 157768001 . G . PASS END=157768033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,105,1575:0,109,255:40,0 chr1 157769848 . C . PASS END=157769875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,183,255:40,0 chr1 157771251 . C . PASS END=157771251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 157771252 . T . PASS END=157771252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 157771253 . A . PASS END=157771253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 157771254 . T . PASS END=157771254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 157771255 . T . PASS END=157771258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 157771259 . C . PASS END=157771259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 157771260 . T . PASS END=157771279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:30:0,86,1096:0,86,255:35,0 chr1 157771280 . A . PASS END=157771280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1184:0,36,255:33,0 chr1 157771281 . A . PASS END=157771283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1321:0,108,255:36,0 chr1 157771284 . A . PASS END=157771284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:34,0 chr1 157771285 . G . PASS END=157771381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,107,1488:0,107,255:40,0 chr1 157771705 . C . PASS END=157771709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 157771710 . A . PASS END=157771710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 157771711 . A . LowGQ END=157771711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,305:3,0,255:11,0 chr1 157771712 . G . PASS END=157771715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 157771716 . A . PASS END=157771716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 157771717 . G . PASS END=157771757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 157771758 . G . PASS END=157771761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 157771762 . C . PASS END=157771769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 157771770 . T . PASS END=157771770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 157771771 . A . PASS END=157771782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 157771783 . G . PASS END=157771783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 157771784 . T . PASS END=157771812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 157771813 . C . PASS END=157771813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr1 157771814 . T . PASS END=157771843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 157771844 . C . PASS END=157771852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:9,0 chr1 157771853 . A . PASS END=157771853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:6,0 chr1 157771854 . T . PASS END=157771858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:7,0 chr1 157771859 . G . PASS END=157771859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 157771860 . T . PASS END=157771860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,286:0,24,255:8,0 chr1 157771861 . G . PASS END=157771871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:12,0 chr1 157771872 . T . PASS END=157771872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 157771873 . A . PASS END=157771878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 157771879 . T . PASS END=157771879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 157771880 . C . PASS END=157771881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 157771882 . G . PASS END=157771882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 157771883 . A . PASS END=157771891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 157771892 . T . PASS END=157771892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,370:0,9,255:11,0 chr1 157771893 . C . PASS END=157771893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 157771894 . T . LowGQ END=157771894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,377:8,0,255:10,0 chr1 157771895 . C . PASS END=157771895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 157771896 . A . PASS END=157771896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 157771897 . G . PASS END=157771899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,490:0,31,255:14,0 chr1 157771900 . C . PASS END=157771900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 157771901 . C . PASS END=157771901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:14,0 chr1 157771902 . T . PASS END=157771902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 157771903 . C . PASS END=157771913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 157771914 . T . PASS END=157771914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 157771915 . C . PASS END=157771925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:18,0 chr1 157771926 . T . PASS END=157771926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr1 157771927 . C . PASS END=157771950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:19,0 chr1 157771951 . C . PASS END=157771952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 157771953 . C . PASS END=157771954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,743:0,47,255:19,0 chr1 157771955 . G . PASS END=157771956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 157771957 . G . PASS END=157771962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 157771963 . G . PASS END=157771972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 157771973 . A . PASS END=157771973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 157771974 . G . PASS END=157771978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 157771979 . C . PASS END=157771983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 157772167 . T . PASS END=157772170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 157772171 . G . PASS END=157772172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 157772173 . C . PASS END=157772177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 157772178 . A . PASS END=157772202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,584:0,48,255:19,0 chr1 157772203 . G . PASS END=157772204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 157772205 . C . PASS END=157772205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 157772206 . C . PASS END=157772207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 157772208 . T . PASS END=157772208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 157772209 . A . PASS END=157772227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:26,0 chr1 157772228 . G . PASS END=157772233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 157772234 . T . PASS END=157772235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 157772236 . G . PASS END=157772243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr1 157772244 . T . PASS END=157772244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 157772245 . C . PASS END=157772246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:30,0 chr1 157772247 . C . PASS END=157772247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 157772248 . T . PASS END=157772256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1148:0,80,255:32,0 chr1 157772257 . C . PASS END=157772257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:31,0 chr1 157772258 . T . PASS END=157772262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:33,0 chr1 157772263 . G . PASS END=157772263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:30,0 chr1 157772264 . A . PASS END=157772267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:33:0,88,1205:0,88,255:32,0 chr1 157772268 . T . PASS END=157772268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:30,0 chr1 157772269 . C . PASS END=157772286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1185:0,80,255:36,0 chr1 157772287 . A . PASS END=157772287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:34,0 chr1 157772288 . A . PASS END=157772407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,83,255:38,0 chr1 157772408 . T . PASS END=157772412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:74:30:0,74,1100:0,74,255:26,0 chr1 157772413 . C . PASS END=157772414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 157772415 . G . PASS END=157772415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 157772416 . G . PASS END=157772417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157772418 . G . PASS END=157772434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,788:0,62,255:27,0 chr1 157772435 . C . PASS END=157772454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,44,255:19,0 chr1 157773635 . T . PASS END=157773654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr1 157773655 . C . PASS END=157773659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 157773660 . G . PASS END=157773662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 157773663 . C . PASS END=157773717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:19,0 chr1 157773718 . T . PASS END=157773726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr1 157773727 . A . PASS END=157773727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,738:0,38,255:22,0 chr1 157773728 . T . PASS END=157773749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,845:0,69,255:24,0 chr1 157773750 . G . PASS END=157773750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 157773751 . G . PASS END=157773773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 157773774 . G . PASS END=157773774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 157773775 . G . PASS END=157773779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 157773780 . G . PASS END=157773780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 157773781 . G . PASS END=157773816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,858:0,62,255:26,0 chr1 157773817 . G . PASS END=157773833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 157773834 . C . PASS END=157773834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 157773835 . A . PASS END=157773835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157773836 . T . PASS END=157773836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr1 157773837 . C . PASS END=157773842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 157773843 . C . PASS END=157773843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,988:0,56,255:26,0 chr1 157773844 . G . PASS END=157773846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157773847 . A . PASS END=157773863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 157773864 . C . PASS END=157773865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 157773866 . C . PASS END=157773872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,61,255:20,0 chr1 157773873 . A . PASS END=157773896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,706:0,57,255:19,0 chr1 157773897 . C . PASS END=157773901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 157776892 . C . PASS END=157776912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,159,255:40,0 chr1 157789797 . C . PASS END=157789827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,118,1800:0,118,255:40,0 chr1 157797387 . T . PASS END=157797414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,191,255:40,0 chr1 157801754 . C . PASS END=157801758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:36,0 chr1 157802982 . C . PASS END=157802993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 157802994 . C . PASS END=157803000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 157803001 . A . PASS END=157803009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:18,0 chr1 157803010 . G . PASS END=157803010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:17,0 chr1 157803011 . T . PASS END=157803016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 157803017 . C . PASS END=157803018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 157803019 . G . PASS END=157803051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr1 157803052 . C . PASS END=157803061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 157803062 . T . PASS END=157803062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 157803063 . G . PASS END=157803074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 157803075 . A . PASS END=157803075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 157803076 . G . PASS END=157803080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr1 157803081 . G . PASS END=157803081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 157803082 . A . PASS END=157803085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 157803086 . T . PASS END=157803088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1088:0,79,255:27,0 chr1 157803089 . T . PASS END=157803098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1058:0,80,255:30,0 chr1 157803099 . T . PASS END=157803099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 157803100 . G . PASS END=157803103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 157803104 . C . PASS END=157803104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 157803105 . C . PASS END=157803228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:31:0,84,1224:0,84,255:39,0 chr1 157803229 . T . PASS END=157803229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1434:0,76,255:34,0 chr1 157803230 . A . PASS END=157803257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1350:0,98,255:36,0 chr1 157803258 . C . PASS END=157803267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:32:0,72,1080:0,96,255:25,0 chr1 157803268 . G . PASS END=157803271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157803272 . T . PASS END=157803297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,68,255:25,0 chr1 157803298 . G . PASS END=157803298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 157803299 . G . PASS END=157803301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 157803302 . T . PASS END=157803302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 157804197 . C . PASS END=157804208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,887:0,62,255:26,0 chr1 157804209 . C . PASS END=157804226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,867:0,81,255:30,0 chr1 157804227 . G . PASS END=157804227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 157804228 . G . PASS END=157804228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 157804229 . T . PASS END=157804229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:30,0 chr1 157804230 . T . PASS END=157804235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr1 157804236 . T . PASS END=157804236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:30,0 chr1 157804237 . G . PASS END=157804240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 157804241 . T . PASS END=157804241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 157804242 . T . PASS END=157804246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 157804247 . C . PASS END=157804251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,1025:0,60,255:26,0 chr1 157804252 . C . PASS END=157804256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 157804257 . A . PASS END=157804271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,76,255:26,0 chr1 157804272 . G . PASS END=157804279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157804280 . T . PASS END=157804280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 157804281 . C . PASS END=157804281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 157804282 . T . PASS END=157804283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 157804284 . G . PASS END=157804309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1124:0,80,255:29,0 chr1 157804310 . C . PASS END=157804318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 157804319 . T . PASS END=157804319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 157804320 . T . PASS END=157804323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 157804324 . G . PASS END=157804326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 157804327 . A . PASS END=157804333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 157804334 . T . PASS END=157804350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr1 157804351 . T . PASS END=157804358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 157804359 . G . PASS END=157804360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 157804361 . A . PASS END=157804361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 157804362 . C . PASS END=157804372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 157804373 . C . PASS END=157804403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,793:0,61,255:26,0 chr1 157804404 . C . PASS END=157804404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 157804405 . C . PASS END=157804427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:24,0 chr1 157804428 . A . PASS END=157804432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 157804433 . G . PASS END=157804447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:25,0 chr1 157804448 . T . PASS END=157804448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 157804449 . G . PASS END=157804452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 157804453 . C . PASS END=157804453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 157804454 . T . PASS END=157804462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 157804463 . A . PASS END=157804463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 157804464 . C . PASS END=157804466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 157804467 . G . PASS END=157804472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:54:23:0,54,810:0,61,255:19,0 chr1 157804473 . T . PASS END=157804473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,731:0,30,255:18,0 chr1 157804474 . G . PASS END=157804499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:18,0 chr1 157804500 . T . PASS END=157804500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 157804501 . G . PASS END=157804527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 157804528 . G . PASS END=157804538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 157805625 . T . PASS END=157805634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1111:0,80,255:33,0 chr1 157805635 . T . PASS END=157805635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:31,0 chr1 157805636 . G . PASS END=157805796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1099:0,81,255:40,0 chr1 157805797 . T . PASS END=157805797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr1 157805798 . C . PASS END=157805806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1233:0,89,255:31,0 chr1 157805807 . A . PASS END=157805807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:29,0 chr1 157805808 . G . PASS END=157805811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr1 157805812 . C . PASS END=157805812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 157805813 . C . PASS END=157805816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 157805817 . A . PASS END=157805860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:24:0,60,900:0,62,255:26,0 chr1 157805861 . G . PASS END=157805861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:19,0 chr1 157805862 . T . PASS END=157805864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 157805865 . C . PASS END=157805865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 157805866 . C . PASS END=157805881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 157805882 . T . PASS END=157805897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,47,255:19,0 chr1 157805898 . C . PASS END=157805898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 157805899 . T . PASS END=157805901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 157805902 . A . PASS END=157805914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,31,255:14,0 chr1 157805915 . C . PASS END=157805918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 157805919 . C . PASS END=157805927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 157805928 . G . LowGQ END=157805928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:9,0 chr1 157805929 . C . PASS END=157805935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 157805936 . G . LowGQ END=157805936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:7,0 chr1 157805937 . A . PASS END=157805945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr1 157809174 . C . PASS END=157809200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:64:0,120,1800:0,143,255:40,0 chr1 157811464 . C . PASS END=157811491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,170,255:40,0 chr1 157963467 . A . PASS END=157963489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 157963490 . C . PASS END=157963490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,492:0,34,255:15,0 chr1 157963491 . C . PASS END=157963493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 157963494 . A . PASS END=157963494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 157963495 . C . PASS END=157963517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:17,0 chr1 157963518 . G . PASS END=157963518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 158045903 . G . PASS END=158045915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:18,0 chr1 158045916 . C . PASS END=158045925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 158045926 . G . PASS END=158045926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 158045927 . A . PASS END=158045938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 158045939 . A . PASS END=158045939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 158045940 . G . PASS END=158045952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,847:0,63,255:23,0 chr1 158045953 . G . PASS END=158045953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 158045954 . G . PASS END=158045971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:26,0 chr1 158045972 . C . PASS END=158045975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 158045976 . T . PASS END=158045999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,922:0,65,255:26,0 chr1 158046000 . T . PASS END=158046000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 158046001 . G . PASS END=158046006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 158046007 . T . PASS END=158046007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 158046008 . G . PASS END=158046025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 158046026 . C . PASS END=158046026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:19,0 chr1 158046027 . C . PASS END=158046027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 158046028 . C . PASS END=158046052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,559:0,45,255:19,0 chr1 158047781 . C . PASS END=158047785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:26,0 chr1 158047786 . C . PASS END=158047787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 158047788 . A . PASS END=158047788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,856:0,64,255:26,0 chr1 158047789 . C . PASS END=158047798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1009:0,81,255:30,0 chr1 158047799 . T . PASS END=158047799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 158047800 . T . PASS END=158047810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:31,0 chr1 158047811 . C . PASS END=158047811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:30,0 chr1 158047812 . A . PASS END=158047921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1142:0,88,255:38,0 chr1 158047922 . C . PASS END=158047930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:26,0 chr1 158054212 . T . PASS END=158054219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 158054220 . G . PASS END=158054220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 158054221 . A . PASS END=158054229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,892:0,72,255:26,0 chr1 158054230 . G . PASS END=158054230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:27,0 chr1 158054231 . G . PASS END=158054233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 158054234 . T . PASS END=158054234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 158054235 . G . PASS END=158054346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1141:0,82,255:40,0 chr1 158054347 . A . PASS END=158054357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,84,255:26,0 chr1 158054358 . G . PASS END=158054361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 158054362 . C . PASS END=158054362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 158054363 . C . PASS END=158054369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:18,0 chr1 158056386 . G . PASS END=158056536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:85:38:0,85,1305:0,85,255:40,0 chr1 158057545 . A . PASS END=158057547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 158057548 . C . PASS END=158057563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 158057564 . G . PASS END=158057581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:32,0 chr1 158057582 . G . PASS END=158057582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 158057583 . G . PASS END=158057595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1327:0,95,255:36,0 chr1 158057596 . A . PASS END=158057632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1090:0,91,255:38,0 chr1 158057633 . C G, 47.16 PASS DP=38;MQ=250.00;MQRankSum=5.137;ReadPosRankSum=4.032;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,15,0:0.395,0.000:38:10,8,0:13,7,0:45:82,0,47,182,182,182:255,0,255:23,0:4.7164e+01,1.2684e-04,5.0000e+01,1.8193e+02,2.1670e+02,1.8494e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,10,9,6:12,11,10,5 chr1 158057634 . G . PASS END=158057641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1274:0,84,255:39,0 chr1 158057642 . G . PASS END=158057642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:36,0 chr1 158057643 . G . PASS END=158057650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1380:0,101,255:37,0 chr1 158057796 . G . PASS END=158057944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,105,1543:0,110,255:40,0 chr1 158058117 . T . PASS END=158058119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 158058120 . C . PASS END=158058120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 158058121 . T . PASS END=158058128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:19,0 chr1 158058129 . T . PASS END=158058132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 158058133 . A . PASS END=158058133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 158058134 . G . PASS END=158058134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 158058135 . T . PASS END=158058135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:22,0 chr1 158058136 . T . PASS END=158058138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 158058139 . C . PASS END=158058140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 158058141 . C . PASS END=158058145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 158058146 . C . PASS END=158058146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 158058147 . C . PASS END=158058157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,850:0,72,255:25,0 chr1 158058158 . G . PASS END=158058158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 158058159 . A . PASS END=158058159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr1 158058160 . C . PASS END=158058162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 158058163 . T . PASS END=158058163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:35:28:0,35,880:0,35,255:24,0 chr1 158058164 . G . PASS END=158058166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 158058167 . T . PASS END=158058168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr1 158058169 . T . PASS END=158058174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 158058175 . G . PASS END=158058175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 158058176 . A . PASS END=158058184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1111:0,82,255:32,0 chr1 158058185 . T . PASS END=158058185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1064:0,65,255:29,0 chr1 158058186 . G . PASS END=158058186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:29,0 chr1 158058187 . T . PASS END=158058189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 158058190 . C . PASS END=158058194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1131:0,80,255:30,0 chr1 158058195 . T . PASS END=158058195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,932:0,38,255:29,0 chr1 158058196 . T . PASS END=158058199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1125:0,90,255:30,1 chr1 158058200 . A . LowGQ END=158058201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,8:31:0:31:0,0,636:53,0,255:26,1 chr1 158058202 . T . PASS END=158058202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:58:31:0,58,1068:0,58,255:26,1 chr1 158058203 . C . LowGQ END=158058209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,647:3,0,255:23,1 chr1 158058210 . T . PASS END=158058213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1008:0,60,255:26,0 chr1 158058214 . T . PASS END=158058214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,817:0,40,255:24,0 chr1 158058215 . C . PASS END=158058215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 158058216 . T . PASS END=158058216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:4:30:0,4,878:0,4,255:24,0 chr1 158058217 . C . PASS END=158058217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 158058218 . A . PASS END=158058220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,74,255:25,0 chr1 158058221 . T . PASS END=158058222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:34:28:0,34,793:0,34,255:23,0 chr1 158058223 . G . PASS END=158058234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:24,0 chr1 158058235 . C . PASS END=158058235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr1 158058236 . T . PASS END=158058239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 158058240 . A . PASS END=158058244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,56,255:19,0 chr1 158059244 . G . PASS END=158059244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:18,0 chr1 158059245 . G . PASS END=158059252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 158059253 . C . PASS END=158059253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 158059254 . C . PASS END=158059254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 158059255 . T . PASS END=158059255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 158059256 . C . PASS END=158059260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,878:0,72,255:24,0 chr1 158059261 . C . PASS END=158059261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 158059262 . T . PASS END=158059262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 158059263 . C . PASS END=158059266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 158059267 . A . PASS END=158059273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr1 158059274 . G . PASS END=158059274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 158059275 . C . PASS END=158059275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 158059276 . T . PASS END=158059280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:29,0 chr1 158059281 . T . PASS END=158059281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr1 158059282 . C . PASS END=158059282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 158059283 . T . PASS END=158059283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 158059284 . C . PASS END=158059285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 158059286 . G . PASS END=158059286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 158059287 . C . PASS END=158059290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 158059291 . G . PASS END=158059292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 158059293 . T . PASS END=158059294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 158059295 . C . PASS END=158059295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 158059296 . T . PASS END=158059296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 158059297 . G . PASS END=158059309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 158059310 . C . PASS END=158059312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158059313 . C . PASS END=158059313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 158059314 . T . PASS END=158059314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 158059315 . G . PASS END=158059315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 158059316 . C . PASS END=158059320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 158059321 . G . PASS END=158059321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 158059322 . A . PASS END=158059342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 158059343 . G . PASS END=158059343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 158059344 . C . PASS END=158059344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 158059345 . T . PASS END=158059345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 158059346 . G . PASS END=158059346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 158059347 . G . PASS END=158059347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 158059348 . C . PASS END=158059353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 158059354 . C . PASS END=158059364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 158059365 . C . PASS END=158059367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 158059368 . T . PASS END=158059371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 158059372 . G . PASS END=158059372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 158059373 . C . PASS END=158059397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,893:0,64,255:26,0 chr1 158059398 . A . PASS END=158059404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 158059405 . G . PASS END=158059415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 158059416 . A . PASS END=158059416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 158059417 . C . PASS END=158059418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 158059508 . G . PASS END=158059521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:34:0,88,1203:0,88,255:35,0 chr1 158059522 . T . PASS END=158059522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:34,0 chr1 158059523 . C . PASS END=158059524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:36,0 chr1 158059525 . A . PASS END=158059525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:35,0 chr1 158059526 . G . PASS END=158059601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,82,255:40,0 chr1 158059602 . C . PASS END=158059608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 158061148 . G . PASS END=158061152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,897:0,78,255:26,0 chr1 158061153 . G . PASS END=158061153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 158061154 . G . PASS END=158061154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 158061155 . C . PASS END=158061159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 158061160 . A . PASS END=158061160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 158061161 . A . PASS END=158061164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 158061165 . G . PASS END=158061165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 158061166 . A . PASS END=158061166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,787:0,50,255:26,0 chr1 158061167 . A . PASS END=158061168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,980:0,84,255:31,0 chr1 158061169 . T . PASS END=158061169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 158061170 . T . PASS END=158061212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:35:0,82,1286:0,82,255:40,0 chr1 158061213 . C . PASS END=158061213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1474:0,74,255:38,0 chr1 158061214 . A . PASS END=158061214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 158061215 . A . PASS END=158061215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1221:0,65,255:38,0 chr1 158061216 . C . PASS END=158061310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1117:0,80,255:40,0 chr1 158061311 . G . PASS END=158061315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 158061316 . G . PASS END=158061316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr1 158061317 . G . PASS END=158061321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,74,255:24,0 chr1 158061322 . G . PASS END=158061322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:21,0 chr1 158061323 . C . PASS END=158061331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:24,0 chr1 158061332 . A . PASS END=158061332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:20,0 chr1 158061333 . G . PASS END=158061338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 158061339 . A . PASS END=158061342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 158061343 . C . PASS END=158061346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 158063129 . A . PASS END=158063129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,574:0,15,255:17,0 chr1 158063130 . G . PASS END=158063140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:23,0 chr1 158063141 . T . PASS END=158063141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 158063142 . G . PASS END=158063142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 158063143 . G . PASS END=158063143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 158063144 . G . PASS END=158063149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,845:0,62,255:26,0 chr1 158063150 . T . PASS END=158063154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 158063155 . G . PASS END=158063158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 158063159 . C . PASS END=158063159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 158063160 . C . PASS END=158063165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 158063166 . C . PASS END=158063181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:29,0 chr1 158063182 . C . PASS END=158063182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 158063183 . T . PASS END=158063184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 158063185 . A . PASS END=158063187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 158063188 . T . PASS END=158063191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1026:0,90,255:31,0 chr1 158063192 . T . PASS END=158063192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:29,0 chr1 158063193 . C . PASS END=158063206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1046:0,87,255:30,0 chr1 158063207 . T . PASS END=158063208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 158063209 . T . PASS END=158063219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1117:0,90,255:30,0 chr1 158063220 . C . PASS END=158063220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:28,0 chr1 158063221 . C . PASS END=158063224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 158063225 . G . PASS END=158063225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 158063226 . C . PASS END=158063227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 158063228 . G . PASS END=158063229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:27,0 chr1 158063230 . A . PASS END=158063231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 158063232 . A . PASS END=158063232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr1 158063233 . G . PASS END=158063233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 158063234 . G . PASS END=158063235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 158063236 . A . PASS END=158063236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 158063413 . G . PASS END=158063552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,108,1288:0,108,255:40,0 chr1 158064103 . T . PASS END=158064106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 158064107 . T . LowGQ END=158064107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,8:31:0:31:0,0,551:40,0,255:22,0 chr1 158064108 . T . PASS END=158064108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 158064109 . A . PASS END=158064109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,834:0,43,255:28,0 chr1 158064110 . A . PASS END=158064112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,921:0,93,255:32,0 chr1 158064113 . A . PASS END=158064113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,903:0,46,255:29,0 chr1 158064114 . T . PASS END=158064115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1061:0,96,255:32,0 chr1 158064116 . A . LowGQ END=158064116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,6:32:0:32:0,0,774:4,0,255:26,0 chr1 158064117 . T . PASS END=158064123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,963:0,82,255:33,0 chr1 158064124 . C . PASS END=158064124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,967:0,65,255:30,0 chr1 158064125 . T . PASS END=158064126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1111:0,82,255:33,0 chr1 158064127 . A . PASS END=158064127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,980:0,52,255:30,0 chr1 158064128 . A . PASS END=158064131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:34,0 chr1 158064132 . G . PASS END=158064132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1052:0,71,255:30,0 chr1 158064133 . G . PASS END=158064136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:34,0 chr1 158064137 . T . PASS END=158064137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1070:0,45,255:29,0 chr1 158064138 . G . PASS END=158064154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1089:0,85,255:33,0 chr1 158064155 . A . PASS END=158064155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:30,0 chr1 158064156 . C . PASS END=158064163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1150:0,85,255:33,0 chr1 158064164 . A . PASS END=158064164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1055:0,52,255:30,0 chr1 158064165 . G . PASS END=158064166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 158064167 . A . PASS END=158064167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1019:0,52,255:26,0 chr1 158064168 . G . PASS END=158064169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 158064170 . A . PASS END=158064170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:26,0 chr1 158064171 . T . PASS END=158064172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,82,255:27,0 chr1 158064173 . A . PASS END=158064173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,976:0,49,255:24,0 chr1 158064174 . G . PASS END=158064176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,82,255:27,0 chr1 158064177 . G . PASS END=158064177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:26,0 chr1 158064178 . A . PASS END=158064178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:26,0 chr1 158064179 . A . PASS END=158064179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 158064180 . G . PASS END=158064180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 158064434 . G . PASS END=158064444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:18,0 chr1 158064445 . T . PASS END=158064445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 158064446 . G . PASS END=158064461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 158064462 . G . PASS END=158064462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 158064463 . T . PASS END=158064483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,706:0,54,255:19,0 chr1 158064484 . T . PASS END=158064484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 158064485 . T . PASS END=158064485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 158064486 . C . PASS END=158064486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 158064487 . C . PASS END=158064487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 158064488 . A . PASS END=158064500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 158064501 . A . PASS END=158064501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 158064502 . T . PASS END=158064541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,809:0,72,255:24,0 chr1 158064542 . C . PASS END=158064542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 158064543 . G . PASS END=158064544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr1 158064545 . C . PASS END=158064545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 158064546 . C . PASS END=158064546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 158064547 . C . PASS END=158064549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 158064550 . A . PASS END=158064563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,886:0,64,255:26,0 chr1 158064564 . A . PASS END=158064564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:22,0 chr1 158064565 . C . PASS END=158064595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:23,0 chr1 158064596 . A . PASS END=158064596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 158064597 . G . PASS END=158064616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:23,0 chr1 158064617 . T . PASS END=158064617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 158064618 . A . PASS END=158064623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 158064624 . C . PASS END=158064624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 158064625 . T . PASS END=158064627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 158064628 . G . PASS END=158064638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 158064639 . C . PASS END=158064640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 158064641 . G . PASS END=158064660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 158064661 . C . PASS END=158064662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:21:0,30,704:0,30,255:15,0 chr1 158064663 . C . PASS END=158064692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,553:0,48,255:18,0 chr1 158064693 . A . PASS END=158064693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 158064694 . C . PASS END=158064701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 158064702 . A . PASS END=158064702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 158064703 . G . PASS END=158064709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:17,0 chr1 158064710 . T . PASS END=158064710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 158064711 . C . PASS END=158064712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 158064713 . C . PASS END=158064713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 158064714 . A . PASS END=158064728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 158064729 . C . PASS END=158064729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 158064730 . A . PASS END=158064791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,660:0,43,255:19,0 chr1 158064792 . C . PASS END=158064802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 158064803 . G . PASS END=158064803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:21,0 chr1 158064804 . C . PASS END=158064820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,864:0,69,255:24,0 chr1 158064821 . A . PASS END=158064821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 158064822 . A . PASS END=158064843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 158064844 . C . PASS END=158064844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 158064845 . T . PASS END=158064845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 158064846 . C . PASS END=158064847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 158064848 . T . PASS END=158064850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 158064851 . A . PASS END=158064859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 158064860 . C . PASS END=158064877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,945:0,62,255:26,0 chr1 158064878 . C . PASS END=158064878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 158064879 . G . PASS END=158064884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 158064885 . A . PASS END=158064885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 158064886 . G . PASS END=158064887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 158064888 . A . PASS END=158064888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:20,0 chr1 158064889 . G . PASS END=158064895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 158064896 . C . PASS END=158064910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,643:0,40,255:19,0 chr1 158097652 . T . PASS END=158097815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1141:0,80,255:40,0 chr1 158097816 . T . PASS END=158097825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 158097826 . C . PASS END=158097839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,745:0,49,255:19,0 chr1 158097840 . A . PASS END=158097842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 158097843 . C . PASS END=158097850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 158097851 . T . PASS END=158097851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 158097852 . G . PASS END=158097864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 158150892 . A . PASS END=158150906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1241:0,89,255:35,0 chr1 158150907 . T . PASS END=158150908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1134:0,75,255:34,0 chr1 158150909 . T . PASS END=158150952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:35,0 chr1 158151245 . T . PASS END=158151252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 158151253 . A . PASS END=158151255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 158151256 . C . PASS END=158151279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr1 158151280 . A . PASS END=158151282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 158151283 . T . PASS END=158151283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 158151284 . C . PASS END=158151309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr1 158151310 . C . PASS END=158151310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 158151311 . G . PASS END=158151314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 158151315 . C . PASS END=158151315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 158151316 . G . PASS END=158151320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 158151321 . C . PASS END=158151321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 158151322 . T . PASS END=158151343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:16,0 chr1 158151344 . A . PASS END=158151344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 158151345 . G . PASS END=158151353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 158151354 . C . PASS END=158151354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 158151355 . T . PASS END=158151364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr1 158151365 . A . PASS END=158151365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 158151366 . C . PASS END=158151371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 158151372 . C . PASS END=158151373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 158151374 . C . PASS END=158151378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 158151379 . C . PASS END=158151389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 158151390 . G . PASS END=158151416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 158151417 . C . PASS END=158151429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:13,0 chr1 158151430 . A . PASS END=158151430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr1 158151431 . C . PASS END=158151463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 158151464 . G . LowGQ END=158151464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:11,0 chr1 158151465 . C . PASS END=158151472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 158151473 . G . PASS END=158151492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr1 158151493 . A . PASS END=158151511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,156:0,15,156:6,0 chr1 158151822 . A . PASS END=158151837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,792:0,66,255:22,0 chr1 158151838 . G . PASS END=158151838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 158151839 . G . PASS END=158151855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:26,0 chr1 158151856 . G . PASS END=158151876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1148:0,87,255:31,0 chr1 158151877 . A . PASS END=158151877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1101:0,57,255:27,0 chr1 158151878 . A . PASS END=158151880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 158151881 . A . PASS END=158151881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1062:0,69,255:29,0 chr1 158151882 . A . PASS END=158151919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1144:0,83,255:33,0 chr1 158151920 . A . PASS END=158151922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1044:0,60,255:29,0 chr1 158151923 . T . PASS END=158151923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 158151924 . T . PASS END=158151924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:32,0 chr1 158151925 . C . PASS END=158151941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:32,0 chr1 158151942 . A . PASS END=158151942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 158151943 . G . PASS END=158151943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 158151944 . C . PASS END=158151947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 158151948 . C . PASS END=158151954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr1 158151955 . G . PASS END=158151956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:30:0,75,1125:0,90,255:25,0 chr1 158151957 . C . PASS END=158151957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,978:0,13,255:24,0 chr1 158151958 . C . PASS END=158151960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 158151961 . A . PASS END=158151961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 158151962 . C . PASS END=158151962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 158151963 . T . PASS END=158151972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,970:0,60,255:29,0 chr1 158151973 . C . PASS END=158151989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1111:0,90,255:31,0 chr1 158151990 . T . PASS END=158151990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 158151991 . C . PASS END=158152008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1202:0,93,255:33,0 chr1 158152009 . G . PASS END=158152009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:28,0 chr1 158152010 . A . PASS END=158152045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:30,0 chr1 158152046 . C . PASS END=158152067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,947:0,65,255:26,0 chr1 158152068 . T . PASS END=158152068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 158152069 . T . PASS END=158152070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,62,255:19,0 chr1 158152071 . A . PASS END=158152079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 158152080 . A . PASS END=158152080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 158152081 . G . PASS END=158152083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 158152084 . G . PASS END=158152100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 158152668 . T . PASS END=158152672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 158152673 . C . PASS END=158152681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 158152682 . T . PASS END=158152682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 158152683 . G . PASS END=158152692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:22,0 chr1 158152693 . T . PASS END=158152693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 158152694 . G . PASS END=158152696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 158152697 . C . PASS END=158152700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 158152701 . G . PASS END=158152710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,892:0,72,255:24,0 chr1 158152711 . T . PASS END=158152711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 158152712 . G . PASS END=158152720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,886:0,62,255:26,0 chr1 158152721 . C . PASS END=158152723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 158152724 . C . PASS END=158152724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 158152725 . T . PASS END=158152726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr1 158152727 . G . PASS END=158152727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 158152728 . T . PASS END=158152761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1062:0,87,255:34,0 chr1 158152762 . A . PASS END=158152762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1215:0,75,255:32,0 chr1 158152763 . T . PASS END=158152926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,81,255:40,0 chr1 158152927 . G . PASS END=158152946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,67,255:26,0 chr1 158153726 . G . PASS END=158153811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1080:0,81,255:40,0 chr1 158153812 . T . PASS END=158153812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1248:0,70,255:35,0 chr1 158153813 . T . PASS END=158153825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:38:0,89,1230:0,89,255:39,0 chr1 158153919 . T . PASS END=158153923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,109,1476:0,109,255:40,0 chr1 158153924 . A . PASS END=158153940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,102,1530:0,113,255:40,0 chr1 158218177 . A . PASS END=158218201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,155,255:40,0 chr1 158224460 . A . PASS END=158224517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,187,255:40,0 chr1 158224874 . G . PASS END=158225115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,1119:0,80,255:40,0 chr1 158225116 . T . PASS END=158225116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 158225117 . A . PASS END=158225135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,892:0,83,255:30,0 chr1 158225136 . T . PASS END=158225136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 158225137 . G . PASS END=158225139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 158225140 . T . PASS END=158225140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 158225794 . A . PASS END=158225794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 158225795 . T . PASS END=158225796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 158225797 . C . PASS END=158225797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 158225798 . T . PASS END=158225798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:20,0 chr1 158225799 . T . PASS END=158225799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,672:0,52,255:21,0 chr1 158225800 . T . PASS END=158225803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 158225804 . G . PASS END=158225804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 158225805 . A . PASS END=158225805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 158225806 . T . PASS END=158225806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 158225807 . A . PASS END=158225809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 158225810 . G . PASS END=158225811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 158225812 . T . PASS END=158225812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:32,0 chr1 158225813 . G . PASS END=158226058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:33:0,84,1249:0,84,255:40,0 chr1 158226059 . T . PASS END=158226059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1170:0,75,255:32,0 chr1 158226060 . C . PASS END=158226072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1242:0,86,255:34,0 chr1 158226576 . T . PASS END=158226584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 158226585 . A . PASS END=158226602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr1 158226603 . G . PASS END=158226814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,1039:0,81,255:40,0 chr1 158226815 . C . PASS END=158226832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,65,255:25,0 chr1 158226833 . C . PASS END=158226854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 158227211 . A . PASS END=158227301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:37:0,96,1366:0,96,255:40,0 chr1 158227471 . T . PASS END=158227480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 158257717 . T . PASS END=158257800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,101,1396:0,101,255:40,0 chr1 158257801 . T . PASS END=158257829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,105,1575:0,128,255:40,0 chr1 158259855 . A . PASS END=158259915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,135,255:40,0 chr1 158260924 . C . PASS END=158260925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 158260926 . T . PASS END=158260926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 158260927 . C . PASS END=158260929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 158260930 . A . PASS END=158260930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 158260931 . G . PASS END=158260932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 158260933 . A . PASS END=158260933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 158260934 . A . PASS END=158260942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:16,0 chr1 158260943 . C . PASS END=158260943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 158260944 . T . PASS END=158260958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,568:0,40,255:19,0 chr1 158260959 . A . PASS END=158260961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:21,0 chr1 158260962 . T . PASS END=158260962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 158260963 . T . PASS END=158260970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 158260971 . G . PASS END=158260973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 158260974 . A . PASS END=158260974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 158260975 . A . PASS END=158260975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 158260976 . C . PASS END=158260981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 158260982 . C . PASS END=158260982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:23,0 chr1 158260983 . T . PASS END=158260983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 158260984 . G . PASS END=158260991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 158260992 . G . PASS END=158260992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 158260993 . G . PASS END=158260993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 158260994 . T . PASS END=158261005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1305:0,90,255:38,0 chr1 158261006 . A . PASS END=158261006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 158261007 . T . PASS END=158261172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:38:0,87,1305:0,107,255:40,0 chr1 158261173 . G . PASS END=158261174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 158261175 . C . PASS END=158261184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,90,255:28,0 chr1 158261185 . C . PASS END=158261185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 158261186 . G . PASS END=158261186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158261187 . A . PASS END=158261190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 158261874 . A . PASS END=158262146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1009:0,86,255:40,0 chr1 158262147 . A . PASS END=158262155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr1 158262386 . T . PASS END=158262388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 158262389 . G . PASS END=158262443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,770:0,60,255:26,0 chr1 158262444 . G . PASS END=158262446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 158262447 . T . PASS END=158262447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 158262448 . T . PASS END=158262449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158262450 . T . PASS END=158262453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 158262454 . G . PASS END=158262463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 158262464 . T . PASS END=158262464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 158262465 . C . PASS END=158262472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 158262473 . A . PASS END=158262473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 158262474 . G . PASS END=158262602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1080:0,84,255:40,0 chr1 158262603 . T . PASS END=158262603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr1 158262604 . G . PASS END=158262629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1164:0,83,255:32,0 chr1 158262630 . C . PASS END=158262645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 158262646 . G . PASS END=158262664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,712:0,44,255:19,0 chr1 158263002 . G . PASS END=158263092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,161,255:40,0 chr1 158263245 . C . PASS END=158263396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:41:0,81,1575:0,81,255:40,0 chr1 158264626 . T . PASS END=158264650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,100,1668:0,100,255:40,0 chr1 158264651 . G . PASS END=158264651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1573:0,74,255:40,0 chr1 158264652 . A . PASS END=158264806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:34:0,84,1260:0,100,255:40,0 chr1 158264807 . G . PASS END=158264828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:42:18:0,42,630:0,54,255:18,0 chr1 158297992 . T . PASS END=158298047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,153,255:40,0 chr1 158298711 . C . PASS END=158298730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:53:0,104,1795:0,104,255:40,0 chr1 158298731 . T . PASS END=158298804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,99,1509:0,99,255:40,0 chr1 158299160 . T . PASS END=158299421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:80:32:0,80,1147:0,80,255:40,0 chr1 158299422 . C . PASS END=158299426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:36:0,75,1125:0,101,255:26,0 chr1 158299427 . C . PASS END=158299431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,89,255:27,0 chr1 158299432 . G . PASS END=158299438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,976:0,68,255:26,0 chr1 158299642 . C . PASS END=158299856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:30:0,90,1065:0,90,255:40,0 chr1 158299857 . A . PASS END=158299857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1447:0,77,255:36,0 chr1 158299858 . A . PASS END=158299904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,96,255:40,0 chr1 158299905 . T . PASS END=158299920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,68,255:26,0 chr1 158300586 . A . PASS END=158300823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1150:0,85,255:40,0 chr1 158300824 . A . PASS END=158300834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:29:0,62,1035:0,62,255:25,0 chr1 158300835 . A . PASS END=158300835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,811:0,39,255:22,0 chr1 158300836 . G . PASS END=158300846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr1 158300847 . G . PASS END=158300852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:18,0 chr1 158301153 . C . PASS END=158301213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,142,255:40,0 chr1 158323779 . A . PASS END=158323836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,140,255:40,0 chr1 158324167 . C . PASS END=158324175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr1 158324176 . C . PASS END=158324186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 158324187 . T . PASS END=158324187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 158324188 . A . PASS END=158324189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 158324190 . C . PASS END=158324190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 158324191 . A . PASS END=158324198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 158324199 . G . PASS END=158324199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1111:0,63,255:32,0 chr1 158324200 . C . PASS END=158324387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:35:0,82,1316:0,82,255:40,0 chr1 158324388 . C . PASS END=158324424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1305:0,95,255:40,0 chr1 158324425 . A G, 50.00 PASS DP=36;MQ=250.00;MQRankSum=4.981;ReadPosRankSum=0.925;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,22,0:0.611,0.000:36:8,12,0:6,10,0:47:85,0,46,787,501,1288:255,0,255:13,0:5.0000e+01,9.6815e-05,4.9108e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,8,14:7,7,12,10 chr1 158324426 . G . PASS END=158324429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:33,0 chr1 158324430 . G . PASS END=158324459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 158324460 . G . PASS END=158324462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 158324463 . T . PASS END=158324463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 158325090 . A . PASS END=158325359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1327:0,81,255:40,0 chr1 158325617 . T . PASS END=158325626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:18,0 chr1 158325627 . G . PASS END=158325627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 158325628 . G . PASS END=158325628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 158325629 . C . PASS END=158325635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr1 158325636 . G . PASS END=158325644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:28,0 chr1 158325645 . C . PASS END=158325645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 158325646 . C . PASS END=158325860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1119:0,88,255:40,0 chr1 158325861 . C . PASS END=158325875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:24,0 chr1 158325876 . T . PASS END=158325895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,668:0,43,255:19,0 chr1 158326288 . G . PASS END=158326381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,160,255:40,2 chr1 158326518 . T . PASS END=158326686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:40:0,99,1371:0,99,255:40,2 chr1 158368312 . T . PASS END=158368314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 158368315 . G A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=1.998;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:4,8,0:7,6,0:48:85,0,49,498,385,884:255,0,255:11,0:5.0000e+01,6.9634e-05,5.2214e+01,4.5000e+02,4.2012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,3,7,7:7,4,11,3 chr1 158368316 . C . PASS END=158368320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 158368321 . C . PASS END=158368322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1012:0,49,255:27,1 chr1 158368323 . T . PASS END=158368323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 158368324 . G . PASS END=158368338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1166:0,86,255:34,0 chr1 158368339 . T . PASS END=158368339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr1 158368340 . C . PASS END=158368352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1119:0,85,255:36,0 chr1 158368353 . T . PASS END=158368417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1275:0,95,255:38,0 chr1 158368418 . A . PASS END=158368420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:36:0,75,1125:0,108,255:26,0 chr1 158368421 . G . PASS END=158368455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1185:0,86,255:35,0 chr1 158368456 . G . PASS END=158368456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 158368457 . G . PASS END=158368503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1241:0,89,255:38,0 chr1 158368504 . G . PASS END=158368540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1355:0,95,255:39,0 chr1 158368541 . A G, 49.91 PASS DP=41;MQ=250.00;MQRankSum=5.464;ReadPosRankSum=3.352;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,20,0:0.488,0.000:41:8,10,0:13,10,0:48:85,0,50,658,751,1409:255,0,255:20,0:4.9909e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,11,9:7,14,9,11 chr1 158368542 . C . PASS END=158368578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:39:0,82,1295:0,82,255:40,0 chr1 158368579 . G . PASS END=158368808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,100,1318:0,100,255:40,0 chr1 158368809 . C . PASS END=158368834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:39:0,84,1228:0,84,255:37,0 chr1 158368835 . A . PASS END=158368835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1223:0,64,255:33,0 chr1 158368836 . G . PASS END=158368845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:37:0,94,1214:0,94,255:35,0 chr1 158368846 . T C, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=3.611;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,21,0:0.553,0.000:38:4,12,0:13,9,0:48:85,0,49,722,546,1268:255,0,255:14,0:5.0000e+01,7.0928e-05,5.1965e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,8,13:11,6,13,8 chr1 158368847 . A . PASS END=158368848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1290:0,80,255:35,0 chr1 158368849 . G . PASS END=158368849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 158368850 . A . PASS END=158368855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:37:0,93,1311:0,95,255:35,0 chr1 158368856 . G . PASS END=158368856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:31,0 chr1 158368857 . T . PASS END=158368859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1215:0,80,255:31,0 chr1 158368860 . A . PASS END=158368864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:35:0,75,1125:0,89,255:26,0 chr1 158368865 . A . PASS END=158368865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:25,0 chr1 158368866 . G . PASS END=158368866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:25,0 chr1 158368867 . A . PASS END=158368867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:25,0 chr1 158368868 . G . PASS END=158368883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,81,255:25,0 chr1 158368884 . C . PASS END=158368919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr1 158368920 . A . PASS END=158368920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 158368921 . G . PASS END=158368928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,932:0,70,255:26,0 chr1 158368929 . A . PASS END=158368929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr1 158368930 . A . PASS END=158368931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 158368932 . C . PASS END=158368939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr1 158368940 . A . PASS END=158368940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 158368941 . G . PASS END=158368942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 158368943 . A . PASS END=158368943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 158368944 . A . PASS END=158368944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 158368945 . A . PASS END=158368945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 158368946 . A . PASS END=158368949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1029:0,84,255:28,0 chr1 158368950 . A . PASS END=158368950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 158368951 . C . PASS END=158368959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:30,0 chr1 158368960 . G . PASS END=158368960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1147:0,44,255:29,0 chr1 158368961 . G . PASS END=158368977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 158368978 . G . PASS END=158368980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,931:0,63,255:30,0 chr1 158368981 . G . LowGQ END=158368981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,744:23,0,255:24,0 chr1 158368982 . G . PASS END=158368990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 158368991 . T . PASS END=158368991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:32,0 chr1 158368992 . C . PASS END=158369104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1142:0,81,255:39,0 chr1 158369105 . C . PASS END=158369105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 158369106 . G . PASS END=158369122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1226:0,88,255:36,0 chr1 158369123 . G . PASS END=158369123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:34,0 chr1 158369124 . T . PASS END=158369151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1156:0,83,255:35,0 chr1 158369152 . T . PASS END=158369163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 158369164 . G . PASS END=158369175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 158369176 . C . PASS END=158369180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 158369181 . G . PASS END=158369182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 158369183 . T . PASS END=158369183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 158369184 . G . PASS END=158369203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 158369204 . A . PASS END=158369220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 158369221 . C . PASS END=158369226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,72,255:18,0 chr1 158369227 . A . PASS END=158369233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:33:15:0,33,495:0,38,255:13,0 chr1 158369234 . G . PASS END=158369234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 158369235 . T . PASS END=158369237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr1 158369238 . T . PASS END=158369243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 158369244 . T . PASS END=158369256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 158389718 . T . PASS END=158390055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:91:43:0,91,1615:0,91,255:40,0 chr1 158390056 . T . PASS END=158390056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1652:0,78,255:40,0 chr1 158390057 . G . PASS END=158390069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:95:49:0,95,1685:0,95,255:40,0 chr1 158390070 . T . PASS END=158390070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1664:0,78,255:40,0 chr1 158390071 . G . PASS END=158390214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:49:0,84,1693:0,84,255:40,0 chr1 158390215 . C . PASS END=158390251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,146,255:40,0 chr1 158390252 . T G, 49.91 PASS DP=56;MQ=206.71;MQRankSum=-1.984;ReadPosRankSum=5.329;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,27,0:0.482,0.000:56:13,11,0:16,16,0:48:85,0,50,966,992,1958:255,0,255:28,0:4.9912e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,13,14:12,17,15,12 chr1 158390253 . A . PASS END=158390289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,155,255:40,0 chr1 158390290 . A . PASS END=158390463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,169,255:40,0 chr1 158390464 . T . PASS END=158390500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,158,255:40,0 chr1 158390501 . G A, 49.73 PASS DP=74;MQ=171.20;MQRankSum=0.401;ReadPosRankSum=-0.054;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,35,0:0.473,0.000:74:20,16,0:19,19,0:48:85,0,50,1215,1371,2586:255,0,255:33,0:4.9727e+01,6.9375e-05,5.2750e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,21,19,16:23,16,20,15 chr1 158390502 . T . PASS END=158390538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,154,255:40,0 chr1 158390539 . C . PASS END=158390656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:32:0,84,1260:0,96,255:40,0 chr1 158435352 . A . PASS END=158436114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:98:40:0,98,1665:0,98,255:40,0 chr1 158436115 . C . PASS END=158436115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,6:67:73:67:0,73,2041:0,73,255:40,0 chr1 158436116 . C . PASS END=158436261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,123,255:40,0 chr1 158436262 . C . PASS END=158436293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,123,255:40,0 chr1 158442116 . A . PASS END=158442142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,196,255:40,0 chr1 158449668 . A . PASS END=158449720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:39:0,103,1350:0,103,255:40,0 chr1 158449721 . T . PASS END=158449757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,147,255:40,0 chr1 158449758 . G A, 49.91 PASS DP=62;MQ=250.00;MQRankSum=6.754;ReadPosRankSum=4.064;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,30,0:0.484,0.000:62:18,13,0:14,17,0:48:85,0,50,1073,1136,2208:255,0,255:28,0:4.9906e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,17,16,14:15,17,17,13 chr1 158449759 . A . PASS END=158449795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,133,255:40,0 chr1 158449796 . T . PASS END=158450366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:32:0,83,1164:0,83,255:40,0 chr1 158450367 . A . PASS END=158450367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr1 158450368 . T . PASS END=158450369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1340:0,92,255:34,0 chr1 158450370 . T . PASS END=158450370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr1 158450371 . G . PASS END=158450371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1340:0,92,255:34,0 chr1 158450372 . T . PASS END=158450372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:33,0 chr1 158450373 . G . PASS END=158450434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:36:0,86,1382:0,86,255:40,0 chr1 158450435 . A . PASS END=158450435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1629:0,64,255:40,0 chr1 158450436 . G . PASS END=158450490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:44:0,86,1644:0,86,255:40,0 chr1 158450491 . C . PASS END=158450491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1496:0,72,255:40,0 chr1 158450492 . T . PASS END=158450528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:43:0,99,1263:0,99,255:40,0 chr1 158450529 . T A, 49.61 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=3.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:12,8,0:12,13,0:48:84,0,50,722,821,1544:255,0,255:23,0:4.9609e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,17,11,10:13,11,12,9 chr1 158450530 . C . PASS END=158450566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:43:0,108,1620:0,113,255:40,0 chr1 158450567 . T . PASS END=158450675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,99,1411:0,104,255:40,0 chr1 158516918 . T . PASS END=158516939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,848:0,61,255:26,0 chr1 158516940 . C . PASS END=158517104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,972:0,81,255:40,0 chr1 158517105 . T . PASS END=158517141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:44:0,108,1596:0,116,255:40,0 chr1 158517142 . C T, 49.78 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=2.561;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,21,0:0.477,0.000:44:15,5,0:8,16,0:48:85,0,50,722,822,1545:255,0,255:19,0:4.9782e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,13,8:14,9,11,10 chr1 158517143 . G . PASS END=158517179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:82:42:0,82,1387:0,82,255:40,0 chr1 158517180 . C . PASS END=158517872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:44:0,95,1517:0,95,255:40,0 chr1 158517873 . A . PASS END=158517873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1629:0,64,255:35,0 chr1 158517874 . C . PASS END=158517895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:41:0,96,1440:0,123,255:40,0 chr1 158532441 . T . PASS END=158532442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 158532443 . A . PASS END=158532703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:29:0,80,1116:0,80,255:40,0 chr1 158532704 . A . PASS END=158532704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1239:0,67,255:31,0 chr1 158532705 . C . PASS END=158532723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1247:0,86,255:32,0 chr1 158532724 . G . PASS END=158532724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr1 158532725 . C . PASS END=158532736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 158532737 . C . PASS END=158532738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 158532739 . G . PASS END=158532740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 158532741 . G . PASS END=158532742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 158532743 . A . PASS END=158532743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 158532744 . T . PASS END=158532789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,792:0,64,255:26,0 chr1 158532790 . A . PASS END=158532790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 158532791 . G . PASS END=158532800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:24,0 chr1 158532801 . T . PASS END=158532801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 158532802 . A . PASS END=158532803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 158532804 . T . PASS END=158532804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:20,0 chr1 158532805 . A . PASS END=158532825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 158532826 . G . PASS END=158532827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158532828 . G . PASS END=158532829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 158532830 . A . PASS END=158532830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158532831 . G . PASS END=158532831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 158532832 . G . PASS END=158532841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:32,0 chr1 158532842 . G A, 50.00 PASS DP=35;MQ=249.58;MQRankSum=4.472;ReadPosRankSum=3.185;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,18,0:0.514,0.000:35:2,9,0:15,9,0:48:85,0,50,643,570,1213:255,0,255:15,0:5.0000e+01,6.5751e-05,5.2910e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,6,12:6,11,5,13 chr1 158532843 . T . PASS END=158532879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1127:0,80,255:34,0 chr1 158532880 . T . PASS END=158533102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:33:0,82,1247:0,82,255:40,0 chr1 158533103 . T . PASS END=158533139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:46:0,120,1800:0,128,255:40,0 chr1 158533140 . A G, 47.03 PASS DP=45;MQ=250.00;MQRankSum=5.618;ReadPosRankSum=3.556;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,18,0:0.400,0.000:45:16,11,0:11,7,0:46:82,0,50,635,859,1493:255,0,255:26,0:4.7028e+01,1.0795e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,20,8,10:14,13,11,7 chr1 158533141 . A . PASS END=158533223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:43:0,110,1620:0,110,255:40,0 chr1 158533224 . A G, 49.98 PASS DP=55;MQ=249.87;MQRankSum=5.884;ReadPosRankSum=3.611;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,27,0:0.491,0.000:55:12,12,0:16,15,0:48:85,0,50,937,933,1870:255,0,255:24,0:4.9983e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,10,17:14,14,15,12 chr1 158533225 . C . PASS END=158533261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,140,255:40,0 chr1 158533262 . T . PASS END=158533297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,111,1665:0,134,255:40,0 chr1 158533298 . C . PASS END=158533299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:27:45:0,27,1496:0,27,255:40,3 chr1 158533300 . A . PASS END=158533300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1566:0,58,255:40,0 chr1 158533301 . A . PASS END=158533332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,102,1446:0,102,255:40,0 chr1 158533333 . G . PASS END=158533333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1254:0,72,255:35,0 chr1 158533334 . G . PASS END=158533360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1338:0,101,255:38,0 chr1 158533361 . A . PASS END=158533361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1114:0,77,255:31,0 chr1 158533362 . C . PASS END=158533379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,92,255:32,0 chr1 158533380 . A . PASS END=158533382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:31:0,65,1100:0,65,255:26,0 chr1 158533383 . C . PASS END=158533383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 158533384 . A . PASS END=158533388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:24,0 chr1 158533389 . T . PASS END=158533389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,894:0,40,255:22,0 chr1 158533390 . C . PASS END=158533394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 158548709 . T . PASS END=158548721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 158548722 . G . PASS END=158548722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 158548723 . C . PASS END=158548739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1117:0,80,255:35,0 chr1 158548740 . A . PASS END=158548740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:32,0 chr1 158548741 . T . PASS END=158549226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:34:0,86,1219:0,86,255:40,0 chr1 158549227 . T . PASS END=158549263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:51:0,120,1800:0,126,255:40,0 chr1 158549264 . G A, 49.97 PASS DP=55;MQ=250.00;MQRankSum=6.356;ReadPosRankSum=3.106;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,27,0:0.491,0.000:55:10,16,0:18,11,0:48:85,0,50,961,993,1955:255,0,255:28,0:4.9972e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,13,14:20,8,16,11 chr1 158549265 . A . PASS END=158549301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:53:0,118,1800:0,118,255:40,0 chr1 158549302 . T . PASS END=158549382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,128,255:40,0 chr1 158549383 . C . PASS END=158549419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:44:0,96,1440:0,116,255:40,0 chr1 158549420 . C T, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.105;ReadPosRankSum=2.651;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,27,0:0.529,0.000:51:16,18,0:8,9,0:48:85,0,50,930,847,1777:255,0,255:19,0:5.0000e+01,6.6527e-05,5.2746e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,13,14:16,8,10,17 chr1 158549421 . G . PASS END=158549491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,104,1333:0,104,255:40,0 chr1 158549492 . C T, 49.86 PASS DP=50;MQ=250.00;MQRankSum=6.049;ReadPosRankSum=1.719;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:26,24,0:0.480,0.000:50:15,12,0:11,12,0:48:85,0,50,858,930,1788:255,0,255:25,0:4.9863e+01,6.6527e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,15,9:15,11,11,13:158549492 chr1 158549493 . C . PASS END=158549510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,146,255:40,0 chr1 158549511 . A G, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.177;ReadPosRankSum=3.011;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:26,26,0:0.500,0.000:52:16,14,0:10,12,0:48:85,0,50,922,914,1836:255,0,255:26,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,9,17,9:15,11,11,15:158549492 chr1 158549512 . T . PASS END=158549548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,146,255:40,0 chr1 158549549 . G . PASS END=158549689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:48:0,113,1755:0,113,255:40,1 chr1 158576229 . A . PASS END=158576239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,676:0,46,255:19,0 chr1 158576240 . C . PASS END=158576244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:23,0 chr1 158576245 . T . PASS END=158576245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 158576246 . A . PASS END=158576259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,894:0,72,255:26,0 chr1 158576260 . A . PASS END=158576276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:28:0,83,859:0,83,255:31,0 chr1 158576277 . T . PASS END=158576277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 158576278 . T . PASS END=158576284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1205:0,93,255:33,0 chr1 158576285 . T . PASS END=158576285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr1 158576286 . T . PASS END=158576300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1164:0,85,255:32,0 chr1 158576301 . C . PASS END=158576301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:30,0 chr1 158576302 . T . PASS END=158576756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1111:0,82,255:40,2 chr1 158576757 . T . PASS END=158576757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:62:44:0,62,1382:0,62,255:40,2 chr1 158576758 . T . PASS END=158576902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1164:0,83,255:40,0 chr1 158576903 . A . PASS END=158576903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1305:0,65,255:29,0 chr1 158576904 . C . PASS END=158576933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1194:0,81,255:38,0 chr1 158576934 . A . PASS END=158576934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1142:0,64,255:33,0 chr1 158576935 . A . PASS END=158576946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1303:0,83,255:37,0 chr1 158576947 . C . PASS END=158576947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 158576948 . T . PASS END=158577170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1263:0,81,255:40,0 chr1 158580545 . C . PASS END=158580545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 158580634 . A . PASS END=158580634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 158580667 . A . PASS END=158580667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:84:0,120,1800:0,236,255:40,0 chr1 158580675 . C . PASS END=158580675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,247,255:40,0 chr1 158580713 . A . PASS END=158580713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,238,255:40,0 chr1 158580731 . A . PASS END=158580731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 158580735 . G . PASS END=158580735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,203,255:40,0 chr1 158580758 . C . PASS END=158580758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr1 158580760 . T . PASS END=158580760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 158581054 . T . PASS END=158581172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1279:0,89,255:40,0 chr1 158581173 . T . PASS END=158581179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:31:0,63,945:0,80,255:23,0 chr1 158582607 . C . PASS END=158582608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 158582609 . G . PASS END=158582613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 158582614 . A . PASS END=158582614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:28,0 chr1 158582615 . T . PASS END=158582620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1050:0,87,255:30,0 chr1 158582621 . C . PASS END=158582621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,952:0,59,255:29,0 chr1 158582622 . T . PASS END=158582645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1096:0,82,255:37,0 chr1 158582646 . T C,G, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.166;ReadPosRankSum=1.661;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,19,1,0:0.514,0.027,0.000:37:11,10,0,0:6,9,1,0:48:85,0,50,647,593,678,661,600,1246,1260:255,0,255:17,0:5.0000e+01,6.6527e-05,5.2759e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:10,7,12,8:8,9,12,8 chr1 158582647 . G . PASS END=158582683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,99,1429:0,99,255:40,0 chr1 158582684 . A . PASS END=158582732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1350:0,81,255:40,0 chr1 158582733 . C . PASS END=158582733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:28,0 chr1 158582734 . A . PASS END=158582735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 158582736 . T . PASS END=158582751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,1009:0,63,255:26,0 chr1 158583503 . G . PASS END=158583503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 158583511 . C . PASS END=158583657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,100,1248:0,100,255:40,0 chr1 158583665 . A . PASS END=158583665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:31,0 chr1 158584043 . T . PASS END=158584052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,224,255:40,0 chr1 158584053 . T . PASS END=158584090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:80:0,120,1800:0,172,255:40,0 chr1 158584091 . A G, 48.97 PASS DP=79;MQ=249.67;MQRankSum=7.594;ReadPosRankSum=-1.308;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,35,0:0.443,0.000:79:21,17,0:23,18,0:48:84,0,50,1227,1534,2761:255,0,255:37,0:4.8969e+01,7.6882e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,21,13,22:26,18,19,16 chr1 158584092 . T . PASS END=158584096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,158,255:40,0 chr1 158584099 . G . PASS END=158584099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:71:0,120,1800:0,166,255:38,0 chr1 158584103 . G GA,GAA, 12.59 PASS DP=68;MQ=249.61;MQRankSum=6.396;ReadPosRankSum=-1.829;FractionInformativeReads=0.912;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,16,5,0:0.258,0.081,0.000:62:21,8,2,0:20,8,3,0:13:23,0,50,57,271,107,85,224,351,304:255,0,255:37,26:1.2586e+01,2.4632e-01,5.3246e+01,5.7243e+01,2.8247e+02,1.1024e+02,1.0948e+02,2.5946e+02,3.8631e+02,3.3147e+02:0.00,11.00,14.00,11.00,22.00,14.00,34.77,45.77,45.77,37.77:17,24,5,16:21,20,10,11 chr1 158585006 . T . PASS END=158585020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,928:0,84,255:34,0 chr1 158585021 . T . PASS END=158585021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr1 158585022 . G . PASS END=158585180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1233:0,84,255:40,0 chr1 158585181 . C . PASS END=158585193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:28:0,75,1125:0,84,255:25,0 chr1 158585203 . C . PASS END=158585203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 158587322 . C . PASS END=158587322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:89:0,120,1800:0,251,255:40,0 chr1 158587327 . T . PASS END=158587352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:91:0,120,1800:0,223,255:40,0 chr1 158587353 . G . PASS END=158587378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:84:0,120,1800:0,219,255:40,0 chr1 158587382 . G . PASS END=158587382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr1 158587390 . C T, 50.00 PASS DP=78;MQ=250.00;MQRankSum=7.585;ReadPosRankSum=5.434;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,41,0:0.526,0.000:78:13,19,0:24,22,0:48:85,0,50,1467,1275,2741:255,0,255:32,0:5.0000e+01,6.6527e-05,5.2755e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,26,12,29:25,12,22,19 chr1 158587829 . C . PASS END=158587846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,158,255:40,0 chr1 158587858 . G . PASS END=158587858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr1 158589012 . C . PASS END=158589124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,111,1704:0,111,255:40,0 chr1 158589960 . C . PASS END=158589967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:16,0 chr1 158589968 . T . PASS END=158589968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 158589969 . G . PASS END=158589980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:19,0 chr1 158589981 . C . PASS END=158589992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 158589993 . T . PASS END=158589998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 158589999 . C . PASS END=158590031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,61,255:26,0 chr1 158590032 . A . PASS END=158590034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 158590035 . C . PASS END=158590038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1061:0,71,255:26,0 chr1 158590039 . C . PASS END=158590045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:31,0 chr1 158590046 . C . PASS END=158590046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 158590047 . C . PASS END=158590196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:31:0,87,1156:0,88,255:40,0 chr1 158590197 . T . PASS END=158590197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:36,0 chr1 158590198 . T . PASS END=158590208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1394:0,101,255:37,0 chr1 158590209 . G . PASS END=158590209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:31,0 chr1 158590210 . T . PASS END=158590230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr1 158590231 . G . PASS END=158590231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 158590232 . C . PASS END=158590232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158590233 . A . PASS END=158590233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 158590234 . A . PASS END=158590237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 158590238 . C . PASS END=158590245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:25,0 chr1 158590246 . A . PASS END=158590255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,62,255:19,0 chr1 158590256 . C . PASS END=158590256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 158592761 . A . PASS END=158592761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1310:0,81,255:35,0 chr1 158592767 . T . PASS END=158592980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:37:0,84,1260:0,94,255:40,0 chr1 158592981 . T . PASS END=158592981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:27,0 chr1 158592982 . C . PASS END=158592982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,92,255:27,0 chr1 158592985 . G . PASS END=158592985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:25,0 chr1 158592989 . A . PASS END=158592989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 158595936 . C . PASS END=158596012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,158,255:40,0 chr1 158596027 . C . PASS END=158596027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,164,255:40,0 chr1 158596629 . C . PASS END=158596797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:36:0,95,1289:0,95,255:40,0 chr1 158597415 . C . PASS END=158597513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,169,255:40,2 chr1 158597523 . T . PASS END=158597524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,186,255:40,0 chr1 158604333 . C . PASS END=158604465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,126,255:40,0 chr1 158604478 . G . PASS END=158604478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 158604597 . C . PASS END=158604597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 158605703 . C . PASS END=158605821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1305:0,81,255:40,0 chr1 158605822 . A . PASS END=158605824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 158605828 . A . PASS END=158605828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 158606431 . C . PASS END=158606518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1249:0,99,255:40,0 chr1 158606519 . T . PASS END=158606551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 158606553 . T . PASS END=158606553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 158607823 . T . PASS END=158607825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 158607826 . A . PASS END=158607863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:32:0,83,1172:0,83,255:36,0 chr1 158607864 . G . PASS END=158607864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 158607865 . A . PASS END=158607897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:38:0,114,1390:0,114,255:40,0 chr1 158607898 . T . PASS END=158607934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,132,255:40,0 chr1 158607935 . T G, 48.83 PASS DP=59;MQ=250.00;MQRankSum=6.542;ReadPosRankSum=-1.336;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,26,0:0.441,0.000:59:18,12,0:15,14,0:47:84,0,50,927,1135,2063:255,0,255:31,0:4.8834e+01,7.8435e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,15,15,11:15,18,19,7 chr1 158607936 . G . PASS END=158607972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:56:0,120,1800:0,155,255:40,0 chr1 158607973 . T . PASS END=158608031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:36:0,91,1379:0,91,255:40,0 chr1 158609372 . C . PASS END=158609476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:38:0,96,1427:0,96,255:40,0 chr1 158609648 . G . PASS END=158609648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 158609660 . C . PASS END=158609797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:35:0,87,1305:0,101,255:40,0 chr1 158612201 . C . PASS END=158612206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,962:0,67,255:24,0 chr1 158612207 . G . PASS END=158612207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 158612208 . G . PASS END=158612211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 158612212 . C . PASS END=158612235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1194:0,90,255:36,0 chr1 158612236 . A G, 49.80 PASS DP=36;MQ=249.84;MQRankSum=5.102;ReadPosRankSum=4.151;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,17,0:0.472,0.000:36:7,7,0:12,10,0:48:85,0,50,608,643,1251:255,0,255:19,0:4.9804e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,9,8:11,8,9,8 chr1 158612237 . C . PASS END=158612273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:37:0,111,1374:0,111,255:40,0 chr1 158612274 . A . PASS END=158612325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:33:0,82,1149:0,82,255:40,0 chr1 158612326 . A . PASS END=158612326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 158612327 . T . PASS END=158612331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 158612332 . T . PASS END=158612332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr1 158612604 . C . PASS END=158612766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:95:33:0,95,1227:0,95,255:40,0 chr1 158613112 . C . PASS END=158613215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:28:0,84,1031:0,84,255:40,0 chr1 158614043 . C . PASS END=158614186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:31:0,85,1156:0,85,255:40,0 chr1 158614978 . C . PASS END=158614982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:35,0 chr1 158614983 . A . PASS END=158614983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1162:0,75,255:33,0 chr1 158614984 . C . PASS END=158615175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:36:0,90,1299:0,94,255:40,0 chr1 158615285 . C . PASS END=158615384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,111,1665:0,129,255:40,0 chr1 158617329 . C . PASS END=158617347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1282:0,105,255:39,0 chr1 158617348 . G . PASS END=158617510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:38:0,96,1361:0,104,255:40,0 chr1 158617521 . A . PASS END=158617521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,102,255:22,0 chr1 158618299 . C . PASS END=158618433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:30:0,80,1169:0,80,255:40,0 chr1 158618434 . A . PASS END=158618434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr1 158618435 . T . PASS END=158618442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 158618443 . T . PASS END=158618443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 158619646 . C . PASS END=158619655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,915:0,75,255:26,0 chr1 158619656 . C . PASS END=158619661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,944:0,84,255:28,0 chr1 158619662 . C . PASS END=158619662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 158619663 . A . PASS END=158619690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1033:0,84,255:35,0 chr1 158619691 . T . PASS END=158619712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1263:0,89,255:35,0 chr1 158619713 . A . PASS END=158619715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1019:0,76,255:26,0 chr1 158619716 . A . PASS END=158619716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1040:0,54,255:25,0 chr1 158619717 . A . PASS END=158619727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:27:0,73,1003:0,73,255:26,0 chr1 158619728 . A C, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,14,0:0,12,0:75:163,78,0,1000,78,1000:255,81,0:0,0:1.2525e+02,7.5250e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,17:0,0,11,15 chr1 158619729 . A . PASS END=158619732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr1 158619733 . A . PASS END=158619733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,917:0,53,255:27,0 chr1 158619734 . A . PASS END=158619734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 158619735 . T . PASS END=158619735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 158619736 . T . PASS END=158619736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 158619737 . C . PASS END=158619737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 158621142 . G . PASS END=158621142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 158621147 . C . PASS END=158621147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 158621157 . C . PASS END=158621258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,150,255:40,0 chr1 158622257 . C . PASS END=158622260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:41:0,109,1407:0,109,255:40,0 chr1 158622261 . T . PASS END=158622261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1481:0,79,255:39,0 chr1 158622262 . G . PASS END=158622323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,101,1353:0,101,255:40,0 chr1 158622324 . G . PASS END=158622360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,132,255:40,0 chr1 158622361 . C . LowGQ END=158622362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,9:57:0:57:0,0,1439:0,0,255:40,0 chr1 158622363 . T . PASS END=158622398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,134,255:40,0 chr1 158622399 . A . PASS END=158622437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1225:0,85,255:40,0 chr1 158622438 . C . PASS END=158622440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,80,255:24,0 chr1 158622441 . T . PASS END=158622441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:24,0 chr1 158622442 . A . PASS END=158622443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 158622453 . G . PASS END=158622453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 158623056 . G . PASS END=158623056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1233:0,96,255:32,0 chr1 158623059 . C . PASS END=158623059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 158623064 . T . PASS END=158623215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1203:0,87,255:40,0 chr1 158623229 . A . PASS END=158623229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 158624401 . C . PASS END=158624401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 158624402 . T . PASS END=158624402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 158624403 . T . PASS END=158624420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr1 158624421 . G . PASS END=158624421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158624422 . C . PASS END=158624422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 158624423 . G . PASS END=158624428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 158624429 . A . PASS END=158624429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr1 158624430 . C . PASS END=158624440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:30,0 chr1 158624441 . T . PASS END=158624441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 158624442 . T . PASS END=158624507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1097:0,89,255:34,0 chr1 158624508 . C . PASS END=158624518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:29:0,66,990:0,71,255:27,0 chr1 158624519 . A . PASS END=158624530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:22:0,51,765:0,66,255:19,0 chr1 158624531 . T . PASS END=158624532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 158624533 . T . PASS END=158624538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 158624548 . A . PASS END=158624548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 158626354 . C . PASS END=158626377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,116,1489:0,116,255:40,0 chr1 158626378 . C T, 48.21 PASS DP=58;MQ=250.00;MQRankSum=6.433;ReadPosRankSum=2.644;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,24,0:0.414,0.000:58:19,14,0:15,10,0:46:83,0,47,183,183,183:255,0,255:34,0:4.8214e+01,1.0898e-04,5.0000e+01,1.8298e+02,2.1775e+02,1.8599e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,14,13,11:19,15,15,9 chr1 158626379 . A . PASS END=158626415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,142,255:40,0 chr1 158626416 . A . PASS END=158626446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,152,255:40,0 chr1 158626459 . A . PASS END=158626459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 158627260 . A . LowGQ END=158627260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,8:30:0:30:0,0,555:101,0,255:22,0 chr1 158627267 . C . PASS END=158627267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1062:0,66,255:31,0 chr1 158627268 . C . PASS END=158627269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1158:0,99,255:34,0 chr1 158627270 . A . PASS END=158627270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:21:34:0,21,911:0,21,255:30,0 chr1 158627271 . G . LowGQ END=158627271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,790:36,0,255:27,0 chr1 158627272 . C . PASS END=158627272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1146:0,102,255:34,0 chr1 158627273 . T . LowGQ END=158627273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,816:26,0,255:28,0 chr1 158627274 . G . PASS END=158627274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,886:0,19,255:29,0 chr1 158627275 . C . PASS END=158627275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1031:0,52,255:31,0 chr1 158627276 . T . LowGQ END=158627276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,8:35:0:35:0,0,743:42,0,255:27,0 chr1 158627277 . T . PASS END=158627277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1122:0,88,255:34,0 chr1 158627278 . C . PASS END=158627280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:50:35:0,50,960:0,50,255:33,0 chr1 158627281 . C . PASS END=158627281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:2:34:0,2,897:0,2,255:28,0 chr1 158627282 . A . PASS END=158627282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1099:0,88,255:33,0 chr1 158627283 . T . PASS END=158627283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1136:0,66,255:32,0 chr1 158627284 . C . PASS END=158627284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1160:0,88,255:33,0 chr1 158627285 . A . PASS END=158627285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1137:0,55,255:28,0 chr1 158627286 . G . LowGQ END=158627286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,901:0,0,255:29,0 chr1 158627287 . C . PASS END=158627288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1041:0,55,255:30,0 chr1 158627289 . C . PASS END=158627290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1110:0,91,255:31,0 chr1 158627291 . A . LowGQ END=158627292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,7:36:0:36:0,0,889:19,0,255:27,0 chr1 158627293 . A . PASS END=158627293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1219:0,81,255:33,0 chr1 158627294 . G . PASS END=158627294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:17:38:0,17,1049:0,17,255:30,0 chr1 158627295 . T . PASS END=158627295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,113,255:32,0 chr1 158627296 . T . PASS END=158627296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:17:38:0,17,1152:0,17,255:31,0 chr1 158627297 . A . PASS END=158627297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:9:38:0,9,1070:0,9,255:31,0 chr1 158627298 . G . PASS END=158627298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:29:39:0,29,1178:0,29,255:33,0 chr1 158627299 . T . PASS END=158627299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:12:39:0,12,1131:0,12,255:34,0 chr1 158627300 . A . PASS END=158627300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1241:0,53,255:34,0 chr1 158627301 . T . PASS END=158627304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:80:39:0,80,1280:0,80,255:40,0 chr1 158627305 . C . PASS END=158627305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1434:0,69,255:40,0 chr1 158627306 . T . PASS END=158627307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:45:0,96,1517:0,96,255:40,0 chr1 158627308 . C . PASS END=158627308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:35:46:0,35,1435:0,35,255:40,0 chr1 158627309 . A . PASS END=158627310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,122,255:40,0 chr1 158627311 . T . PASS END=158627311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:60:46:0,60,1450:0,60,255:40,0 chr1 158627312 . A . PASS END=158627312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1558:0,105,255:40,0 chr1 158627313 . G . PASS END=158627313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1452:0,66,255:40,0 chr1 158627314 . G . PASS END=158627314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1582:0,105,255:40,0 chr1 158627315 . T C, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.425;ReadPosRankSum=1.248;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,23,0:0.561,0.000:41:12,12,0:6,11,0:48:85,0,49,822,570,1393:255,0,255:19,0:5.0000e+01,7.1964e-05,5.1819e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,13,8,15:9,9,9,14 chr1 158627316 . T . PASS END=158627316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1517:0,75,255:40,0 chr1 158627317 . C . PASS END=158627318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:51:0,103,1690:0,103,255:40,0 chr1 158627319 . T . PASS END=158627319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:65:51:0,65,1704:0,65,255:40,0 chr1 158627320 . T . PASS END=158627321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:98:51:0,98,1717:0,98,255:40,0 chr1 158627322 . T . PASS END=158627322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:50:51:0,50,1568:0,50,255:40,0 chr1 158627323 . C . PASS END=158627323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1714:0,67,255:40,0 chr1 158627324 . T . PASS END=158627327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:89:50:0,89,1676:0,89,255:40,0 chr1 158627328 . A . PASS END=158627328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:55:50:0,55,1606:0,55,255:40,0 chr1 158627329 . T . PASS END=158627352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,120,255:40,0 chr1 158627353 . C . PASS END=158627363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,143,255:40,0 chr1 158627364 . T . PASS END=158627364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1659:0,75,255:40,0 chr1 158627365 . G . PASS END=158627438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:36:0,98,1349:0,98,255:40,0 chr1 158627439 . T . PASS END=158627439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1041:0,72,255:31,0 chr1 158627440 . T . PASS END=158627450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:32,0 chr1 158627451 . A . PASS END=158627469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,901:0,64,255:26,0 chr1 158627470 . C . PASS END=158627470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 158627471 . T . PASS END=158627471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 158627472 . G . PASS END=158627473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,731:0,49,255:19,0 chr1 158627474 . A . PASS END=158627474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 158627475 . G . PASS END=158627484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,668:0,43,255:19,0 chr1 158627487 . A . PASS END=158627487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 158631077 . C . PASS END=158631105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:49:0,113,1800:0,113,255:40,0 chr1 158631106 . G C, 44.04 PASS DP=65;MQ=250.00;MQRankSum=6.681;ReadPosRankSum=3.718;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,24,0:0.369,0.000:65:20,9,0:21,15,0:44:79,0,50,830,1408,2238:255,0,255:40,0:4.4035e+01,1.9337e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,18,10,14:22,19,15,9 chr1 158631107 . T . PASS END=158631143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,148,255:40,0 chr1 158631144 . C . PASS END=158631200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:49:0,120,1800:0,133,255:40,0 chr1 158632479 . A . PASS END=158632479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 158632491 . C . PASS END=158632493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1140:0,60,255:32,0 chr1 158632494 . A . PASS END=158632500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1107:0,60,255:34,0 chr1 158632501 . T . PASS END=158632502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr1 158632503 . G . PASS END=158632504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:66:35:0,66,1189:0,66,255:36,0 chr1 158632505 . A . PASS END=158632507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,101,1374:0,101,255:38,0 chr1 158632508 . A . PASS END=158632513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr1 158632514 . G . PASS END=158632530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,117,1459:0,117,255:40,0 chr1 158632531 . T C, 50.00 PASS DP=45;MQ=249.98;MQRankSum=5.722;ReadPosRankSum=3.174;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,24,0:0.533,0.000:45:7,14,0:14,10,0:48:85,0,50,859,735,1594:255,0,255:21,0:5.0000e+01,6.7045e-05,5.2622e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,8,14,10:11,10,8,16 chr1 158632532 . C . PASS END=158632568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,108,1717:0,108,255:40,0 chr1 158632569 . T . PASS END=158632591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,125,255:40,0 chr1 158632592 . C . PASS END=158632592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:72:52:0,72,1448:0,72,255:40,0 chr1 158632593 . T . PASS END=158632716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,98,255:40,0 chr1 158632717 . T . PASS END=158632722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:30:0,63,945:0,86,255:26,0 chr1 158632723 . T . PASS END=158632735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:22:0,54,810:0,66,255:19,0 chr1 158636106 . C . PASS END=158636110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 158636111 . G . PASS END=158636111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 158636112 . A . PASS END=158636126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:26,0 chr1 158636127 . C . PASS END=158636154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1156:0,93,255:34,0 chr1 158636155 . T . PASS END=158636155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:65:35:0,65,958:0,65,255:33,0 chr1 158636156 . T . PASS END=158636168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1167:0,91,255:37,0 chr1 158636169 . C . PASS END=158636169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:36,0 chr1 158636170 . A . PASS END=158636177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,100,1232:0,100,255:39,0 chr1 158636178 . C . PASS END=158636178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1158:0,67,255:35,0 chr1 158636179 . C . PASS END=158636186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1244:0,84,255:38,0 chr1 158636187 . C . PASS END=158636222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1250:0,81,255:38,0 chr1 158636223 . G . PASS END=158636223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:25,0 chr1 158636224 . C T, 50.00 PASS DP=36;MQ=249.97;MQRankSum=4.574;ReadPosRankSum=1.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,26,0:0.722,0.000:36:4,9,0:6,17,0:38:85,0,36,185,185,185:255,0,255:8,0:5.0001e+01,6.2105e-04,3.8761e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,8,9,17:6,4,16,10 chr1 158636225 . G . PASS END=158636225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 158636226 . C . PASS END=158636226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:27,0 chr1 158636227 . T . PASS END=158636232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:28,0 chr1 158636233 . T . PASS END=158636233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 158636234 . C . PASS END=158636252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1041:0,87,255:30,0 chr1 158636253 . T . PASS END=158636253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 158636254 . T . PASS END=158636258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 158636259 . C . PASS END=158636261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 158636262 . C . PASS END=158636263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:27,0 chr1 158636264 . G . PASS END=158636265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 158636266 . T . PASS END=158636282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:27:0,60,900:0,67,255:24,0 chr1 158636283 . G . PASS END=158636287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 158636302 . A . PASS END=158636302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 158637647 . C . PASS END=158637819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:85:29:0,85,1049:0,85,255:40,0 chr1 158637820 . C . PASS END=158637842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:55:0,81,1215:0,152,255:40,0 chr1 158637843 . T . PASS END=158637852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:60:49:0,60,900:0,126,255:24,0 chr1 158637861 . A . PASS END=158637861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:18:40:0,18,270:0,120,255:6,0 chr1 158637865 . GAAA GAA,GA,G,GAAAAA, 104.59 PASS DP=36;MQ=250.00;MQRankSum=2.306;ReadPosRankSum=1.793;FractionInformativeReads=0.944;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:2,15,11,4,2,0:0.441,0.324,0.118,0.059,0.000:34:0,7,4,2,1,0:2,8,7,2,1,0:24:117,69,27,61,0,56,133,41,108,97,256,87,99,230,143,120,36,55,120,165,97:255,0,255:2,39:1.0459e+02,6.3454e+01,2.4050e+01,5.4590e+01,1.7522e-02,5.3018e+01,1.2728e+02,4.0888e+01,1.0763e+02,9.3888e+01,2.5035e+02,8.6928e+01,9.8829e+01,2.2999e+02,1.3993e+02,1.4284e+02,6.4402e+01,8.3590e+01,1.4903e+02,1.9368e+02,1.2232e+02:0.00,6.00,9.00,6.00,12.00,9.00,6.00,12.00,12.00,9.00,6.00,12.00,12.00,12.00,9.00,34.77,40.77,40.77,40.77,40.77,37.77:1,1,8,24:1,1,20,12 chr1 158639194 . C . PASS END=158639194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr1 158639197 . C . PASS END=158639344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:39:0,81,1215:0,99,255:40,0 chr1 158639345 . G . PASS END=158639345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:26,0 chr1 158639346 . G . PASS END=158639352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:27,0 chr1 158639353 . G . PASS END=158639353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 158639499 . C . PASS END=158639563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,190,255:40,0 chr1 158639564 . T . PASS END=158639576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,156,255:40,0 chr1 158639586 . T . PASS END=158639586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,157,255:40,0 chr1 158641133 . T . PASS END=158641137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1235:0,102,255:38,0 chr1 158641138 . T . PASS END=158641138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:38,0 chr1 158641139 . C . PASS END=158641235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:38:0,87,1340:0,87,255:40,1 chr1 158641236 . A . PASS END=158641236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:34,0 chr1 158641237 . G . PASS END=158641241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1264:0,81,255:34,0 chr1 158641242 . G . PASS END=158641242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:30,0 chr1 158641243 . C . PASS END=158641243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 158641849 . C . PASS END=158641857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1024:0,84,255:29,0 chr1 158641858 . A . PASS END=158641858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 158641859 . C . PASS END=158641860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr1 158641861 . C . PASS END=158641861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 158641862 . A . PASS END=158641865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 158641866 . A . PASS END=158641866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 158641867 . A . PASS END=158641952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1147:0,80,255:40,0 chr1 158641953 . G . PASS END=158641956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:33:0,78,1170:0,99,255:26,0 chr1 158641957 . G . PASS END=158641958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 158641959 . C . PASS END=158641964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:21,0 chr1 158641965 . A . PASS END=158641966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:21,0 chr1 158641967 . T . PASS END=158641967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,893:0,32,255:19,0 chr1 158641968 . T . PASS END=158641971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:21:0,54,810:0,63,255:19,0 chr1 158641972 . G . PASS END=158641972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr1 158641973 . T . PASS END=158641986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 158641990 . T . PASS END=158641990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 158644106 . T . PASS END=158644106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 158644119 . C . PASS END=158644220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:45:0,89,1674:0,89,255:40,0 chr1 158644330 . C . PASS END=158644331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr1 158644332 . T . PASS END=158644465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1172:0,83,255:40,0 chr1 158645931 . C . PASS END=158645944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1258:0,102,255:37,0 chr1 158645945 . C . PASS END=158645945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr1 158645946 . A . PASS END=158646061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1167:0,83,255:40,0 chr1 158646062 . T . PASS END=158646078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:25,0 chr1 158646079 . C . PASS END=158646085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 158646097 . A . PASS END=158646097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 158647473 . G . PASS END=158647473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1274:0,102,255:34,0 chr1 158647480 . C . PASS END=158647494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:38:0,98,1398:0,98,255:40,0 chr1 158647495 . A T,C, 173.41 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,1,0:0.977,0.023,0.000:43:0,21,0,0:0,21,1,0:120:211,126,0,1584,91,175,1619,126,1583,1618:255,129,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.2241e+02,1.7541e+02,4.5000e+02,1.5817e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,25,18:0,0,25,18 chr1 158647496 . G . PASS END=158647521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:43:0,96,1375:0,96,255:40,0 chr1 158647522 . A G, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.703;ReadPosRankSum=-0.032;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,32,0:0.653,0.000:49:9,15,0:8,17,0:44:85,0,42,1079,608,1687:255,0,255:15,0:5.0000e+01,1.7862e-04,4.5069e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,7,20,12:8,9,21,11 chr1 158647523 . C . PASS END=158647559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,142,255:40,0 chr1 158647560 . C . PASS END=158647593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,141,255:40,0 chr1 158647594 . C . PASS END=158647624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:38:0,84,1357:0,84,255:40,0 chr1 158647630 . G . PASS END=158647630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 158648184 . T . PASS END=158648184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 158648191 . C . PASS END=158648200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,519:0,45,255:15,0 chr1 158648201 . G . PASS END=158648201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 158648202 . T . PASS END=158648209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,623:0,51,255:19,0 chr1 158648210 . T . PASS END=158648250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,715:0,60,255:26,0 chr1 158648251 . C . PASS END=158648255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 158648256 . A . PASS END=158648283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,894:0,64,255:26,0 chr1 158648284 . T . PASS END=158648285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 158648286 . T . PASS END=158648290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 158648291 . T . PASS END=158648291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 158648292 . A . PASS END=158648293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 158648294 . A . PASS END=158648294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 158648295 . C . PASS END=158648295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 158648296 . T . PASS END=158648296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 158648297 . G . PASS END=158648301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 158648302 . A . PASS END=158648324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:18,0 chr1 158648329 . T . PASS END=158648329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 158650373 . C . PASS END=158650515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:87:43:0,87,1305:0,97,255:40,0 chr1 158650516 . C . PASS END=158650519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:69:37:0,69,1035:0,111,255:24,0 chr1 158651317 . C . PASS END=158651317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:23,0 chr1 158651318 . T . PASS END=158651319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 158651320 . G . PASS END=158651321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,748:0,58,255:24,0 chr1 158651322 . C . PASS END=158651326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 158651327 . A . PASS END=158651327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 158651328 . T . PASS END=158651410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,986:0,81,255:38,0 chr1 158651411 . A . PASS END=158651411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:31,0 chr1 158651412 . G . PASS END=158651442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1156:0,83,255:33,0 chr1 158651443 . C . PASS END=158651444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:24,0 chr1 158651445 . C . PASS END=158651446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:29:0,40,921:0,40,255:23,0 chr1 158651447 . T . PASS END=158651452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 158651453 . T . PASS END=158651457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 158653161 . C . PASS END=158653286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:98:43:0,98,1492:0,98,255:40,0 chr1 158654898 . C . PASS END=158654998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:38:0,114,1421:0,114,255:40,0 chr1 158654999 . A . PASS END=158655035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,184,255:40,0 chr1 158655036 . G A, 247.73 PASS DP=67;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,34,0:0,33,0:198:286,201,0,2535,201,2535:255,201,0:0,0:2.4773e+02,1.9773e+02,0.0000e+00,4.5000e+02,2.3250e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,29:0,0,37,30 chr1 158655037 . A . PASS END=158655073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,148,255:40,0 chr1 158655074 . C . PASS END=158655124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:46:0,111,1665:0,117,255:40,0 chr1 158655125 . T . PASS END=158655137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1426:0,101,255:38,0 chr1 158656284 . G . PASS END=158656307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:89:0,120,1800:0,251,255:40,0 chr1 158656347 . CAG C,CAGAGAG,CAGAG,CAGAGAGAG, 214.77 PASS DP=113;MQ=249.90;MQRankSum=2.832;ReadPosRankSum=0.130;FractionInformativeReads=0.690;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 2/2:3,2,62,9,2,0:0.026,0.795,0.115,0.026,0.000:78:2,2,32,6,1,0:1,0,30,3,1,0:101:229,1922,273,168,215,0,1066,1112,93,151,791,864,165,634,223,2022,2022,2022,2022,2022,2022:255,0,255:3,85:2.1477e+02,4.5000e+02,2.7310e+02,1.6477e+02,2.2310e+02,0.0000e+00,4.5000e+02,4.5000e+02,1.0070e+02,1.5070e+02,4.5000e+02,4.5000e+02,1.7304e+02,4.5000e+02,2.2304e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,11.00,14.01,11.00,22.00,14.01,11.00,22.00,22.00,14.01,11.00,22.00,22.00,22.00,14.01,34.77,45.77,45.77,45.77,45.77,37.78:1,2,38,37:0,3,48,27 chr1 158656427 . T . LowGQ END=158656427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,11:97:0:97:0,0,2605:47,0,255:6,10 chr1 158669468 . C . PASS END=158669646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,155,255:40,0 chr1 158669647 . T . PASS END=158669683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:66:0,120,1800:0,182,255:40,0 chr1 158669684 . A G, 50.00 PASS DP=70;MQ=249.94;MQRankSum=7.162;ReadPosRankSum=1.633;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,38,0:0.543,0.000:70:16,20,0:16,18,0:48:85,0,49,1306,1108,2414:255,0,255:30,0:5.0000e+01,6.8598e-05,5.2362e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,13,21,17:19,13,19,19 chr1 158669685 . A . PASS END=158669721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,133,255:40,0 chr1 158669722 . T . PASS END=158670442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,108,1537:0,113,255:40,0 chr1 158686958 . T . PASS END=158687706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:36:0,89,1442:0,89,255:40,0 chr1 158687707 . A . PASS END=158687743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1770:0,120,255:40,0 chr1 158687744 . A G, 50.00 PASS DP=61;MQ=250.00;MQRankSum=6.701;ReadPosRankSum=2.258;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,31,0:0.508,0.000:61:15,12,0:15,19,0:48:85,0,50,1064,1032,2096:255,0,255:29,0:5.0000e+01,6.5233e-05,5.2983e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,13,19,12:14,16,16,15 chr1 158687745 . T . PASS END=158687781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,153,255:40,0 chr1 158687782 . T . PASS END=158687953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:55:0,108,1620:0,158,255:40,0 chr1 158724606 . A . PASS END=158724684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1800:0,131,255:40,0 chr1 158724685 . A . PASS END=158724721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:68:0,120,1800:0,166,255:40,0 chr1 158724722 . G C, 45.19 PASS DP=68;MQ=250.00;MQRankSum=6.884;ReadPosRankSum=4.272;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,26,0:0.382,0.000:68:20,15,0:22,11,0:45:80,0,50,850,1443,2314:255,0,255:36,0:4.5187e+01,1.5325e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,24,5,21:22,20,14,12 chr1 158724723 . T . PASS END=158724749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,148,255:40,0 chr1 158724750 . C T, 46.38 PASS DP=68;MQ=250.00;MQRankSum=6.931;ReadPosRankSum=0.338;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,27,0:0.397,0.000:68:19,15,0:22,12,0:46:81,0,50,917,1427,2344:255,0,255:30,0:4.6375e+01,1.2192e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,24,11,16:19,22,15,12 chr1 158724751 . A . PASS END=158724787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,106,1375:0,106,255:40,0 chr1 158724788 . C . PASS END=158724806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,118,1552:0,118,255:40,0 chr1 158724807 . A . PASS END=158724843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:42:0,90,1353:0,90,255:40,0 chr1 158724844 . G A, 41.44 PASS DP=45;MQ=250.00;MQRankSum=5.373;ReadPosRankSum=2.278;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,15,0:0.341,0.000:44:12,11,0:17,4,0:41:76,0,50,536,1028,1565:255,0,255:26,0:4.1442e+01,3.3342e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,8,7:17,12,4,11 chr1 158724845 . C . PASS END=158724881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:43:0,114,1710:0,114,255:40,0 chr1 158724882 . G . PASS END=158724927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,114,1710:0,119,255:40,0 chr1 158724928 . A . PASS END=158724960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:44:0,94,1590:0,94,255:40,0 chr1 158724961 . G . PASS END=158724961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1525:0,63,255:40,0 chr1 158724962 . C . PASS END=158724964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1643:0,119,255:40,0 chr1 158724965 . T C, 30.15 PASS DP=45;MQ=250.00;MQRankSum=5.069;ReadPosRankSum=3.426;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,12,0:0.267,0.000:45:18,8,0:15,4,0:30:65,0,50,393,1176,1569:255,0,255:32,0:3.0149e+01,4.2202e-03,5.3004e+01,3.9250e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,15,6,6:17,16,6,6 chr1 158724966 . T . PASS END=158724987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,99,1598:0,99,255:40,0 chr1 158724988 . A G, 32.03 PASS DP=48;MQ=250.00;MQRankSum=5.244;ReadPosRankSum=1.914;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,13,0:0.277,0.000:47:18,9,0:16,4,0:32:67,0,50,457,1216,1673:255,0,255:32,0:3.2028e+01,2.7453e-03,5.3003e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,17,7,6:21,13,7,6 chr1 158724989 . G . PASS END=158725005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:47:0,120,1800:0,127,255:40,0 chr1 158725006 . C T, 32.33 PASS DP=47;MQ=250.00;MQRankSum=5.221;ReadPosRankSum=3.806;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,13,0:0.283,0.000:46:17,8,0:16,5,0:32:67,0,50,407,1170,1577:255,0,255:32,0:3.2331e+01,2.5614e-03,5.3003e+01,4.0746e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,21,6,7:16,17,7,6 chr1 158725007 . A . PASS END=158725043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,110,1735:0,110,255:40,0 chr1 158725044 . G . PASS END=158725084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,105,1520:0,110,255:40,0 chr1 158725085 . C . PASS END=158725085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 158725086 . C . PASS END=158725135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:39:0,101,1380:0,101,255:40,0 chr1 158725136 . C . PASS END=158725136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1613:0,75,255:40,0 chr1 158725137 . T . PASS END=158725156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,134,255:40,0 chr1 158725157 . G . PASS END=158725193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,129,255:40,0 chr1 158725194 . T C, 49.99 PASS DP=55;MQ=250.00;MQRankSum=6.356;ReadPosRankSum=3.628;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,27,0:0.491,0.000:55:19,13,0:9,14,0:48:85,0,50,956,935,1891:255,0,255:24,0:4.9995e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,16,11:11,17,12,15 chr1 158725195 . G . PASS END=158725236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,110,1800:0,110,255:40,0 chr1 158725237 . C T, 49.95 PASS DP=52;MQ=250.00;MQRankSum=6.114;ReadPosRankSum=1.649;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,25,0:0.490,0.000:51:17,14,0:9,11,0:48:85,0,50,854,921,1776:255,0,255:24,0:4.9951e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,17,9,16:8,18,8,17 chr1 158725238 . T . PASS END=158725268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,105,1575:0,119,255:40,0 chr1 158725269 . C T, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.615;ReadPosRankSum=0.663;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,25,0:0.568,0.000:44:10,12,0:9,13,0:48:85,0,48,850,647,1497:255,0,255:15,0:5.0000e+01,7.5329e-05,5.1356e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,14,11:10,9,9,16 chr1 158725270 . T . PASS END=158725300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,99,1474:0,99,255:40,0 chr1 158725301 . G A, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=-0.089;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:18,24,0:0.571,0.000:42:7,12,0:11,12,0:48:85,0,48,814,599,1413:255,0,255:17,0:5.0000e+01,7.6364e-05,5.1188e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,12,14,10:9,9,8,16:158725301 chr1 158725302 . G . PASS END=158725309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,109,1468:0,109,255:40,0 chr1 158725310 . A T, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.432;ReadPosRankSum=-0.102;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:17,25,0:0.595,0.000:42:7,12,0:10,13,0:47:85,0,47,802,608,1410:255,0,255:17,0:5.0000e+01,8.4648e-05,5.0234e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,11,12,13:10,7,11,14:158725301 chr1 158725311 . G . PASS END=158725344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:40:0,105,1529:0,105,255:40,0 chr1 158725345 . G A, 50.00 PASS DP=41;MQ=249.74;MQRankSum=4.954;ReadPosRankSum=2.732;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,22,0:0.537,0.000:41:7,10,0:12,12,0:47:85,0,47,185,185,185:255,0,255:18,0:5.0000e+01,9.0343e-05,4.9668e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,11,10,12:10,9,10,12 chr1 158725346 . G . PASS END=158725382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:41:0,90,1500:0,90,255:40,0 chr1 158725383 . G . PASS END=158725452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:41:0,93,1438:0,93,255:40,0 chr1 158725453 . C . PASS END=158725489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,108,1620:0,111,255:40,0 chr1 158725490 . G A, 49.40 PASS DP=46;MQ=250.00;MQRankSum=5.778;ReadPosRankSum=3.021;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,21,0:0.457,0.000:46:7,9,0:18,12,0:48:84,0,50,751,857,1608:255,0,255:22,0:4.9404e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,15,10,11:12,13,12,9 chr1 158725491 . T . PASS END=158725563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:39:0,85,1393:0,85,255:40,0 chr1 158725564 . A G, 49.49 PASS DP=40;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=2.042;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,18,0:0.462,0.000:39:9,5,0:12,13,0:48:84,0,50,644,751,1395:255,0,255:21,0:4.9493e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,7,11:15,6,12,6 chr1 158725565 . A . PASS END=158725585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:36:0,94,1268:0,94,255:38,0 chr1 158725586 . T . PASS END=158725586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:31,0 chr1 158725587 . A . PASS END=158725601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:33,0 chr1 158725602 . C . PASS END=158725606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:32,0 chr1 158725607 . T . PASS END=158725624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:26,0 chr1 158725625 . G . PASS END=158725626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 158725627 . C . PASS END=158725635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 158725636 . A . PASS END=158725637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 158735534 . T . PASS END=158735557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1026:0,80,255:31,0 chr1 158735558 . T . PASS END=158735594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:31:0,91,1103:0,91,255:37,0 chr1 158735595 . C T, 44.38 PASS DP=38;MQ=250.00;MQRankSum=5.026;ReadPosRankSum=2.270;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,14,0:0.378,0.000:37:13,9,0:10,5,0:44:79,0,50,406,814,1221:255,0,255:23,0:4.4381e+01,1.8017e-04,5.3000e+01,4.0629e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,8,6:10,13,11,3 chr1 158735596 . G . PASS END=158735609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1311:0,95,255:37,0 chr1 158735610 . A . PASS END=158735610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1227:0,64,255:32,0 chr1 158735611 . A . PASS END=158735632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:34,0 chr1 158735633 . C . PASS END=158735653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,93,255:31,0 chr1 158735654 . G . PASS END=158735656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 158735657 . C . PASS END=158735657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:27,0 chr1 158735658 . T . PASS END=158735674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1186:0,86,255:32,0 chr1 158735675 . G . PASS END=158735675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:33,0 chr1 158735676 . T . PASS END=158735690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1311:0,105,255:35,0 chr1 158735691 . T C, 49.94 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=2.129;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:8,7,0:10,10,0:48:85,0,50,600,628,1227:255,0,255:18,0:4.9936e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,9,8:8,10,7,10 chr1 158735692 . G . PASS END=158735703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1241:0,89,255:34,0 chr1 158735704 . A . PASS END=158735704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 158735705 . A . PASS END=158735739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1249:0,89,255:36,0 chr1 158735740 . A G, 49.78 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=3.663;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,15,0:0.469,0.000:32:10,6,0:7,9,0:48:85,0,50,536,563,1100:255,0,255:16,0:4.9784e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,8,7:9,8,7,8 chr1 158735741 . G . PASS END=158735772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:31,0 chr1 158735773 . T . PASS END=158735773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:27,0 chr1 158735774 . G . PASS END=158735774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 158735775 . C . PASS END=158735777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 158735778 . G . PASS END=158735783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 158735784 . G . PASS END=158735784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 158735785 . A . PASS END=158735801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 158735802 . G . PASS END=158735802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1261:0,65,255:30,0 chr1 158735803 . T . PASS END=158735817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,91,255:33,0 chr1 158735818 . C . PASS END=158735818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:30,0 chr1 158735819 . A . PASS END=158735854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1349:0,95,255:37,0 chr1 158735855 . C . PASS END=158735891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1201:0,86,255:39,0 chr1 158735892 . A G, 47.58 PASS DP=41;MQ=250.00;MQRankSum=5.385;ReadPosRankSum=3.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,17,0:0.415,0.000:41:9,13,0:15,4,0:46:82,0,50,576,822,1398:255,0,255:23,0:4.7580e+01,9.7591e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,10,7:10,14,12,5 chr1 158735893 . T . PASS END=158735929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,110,1543:0,110,255:40,0 chr1 158735930 . G . PASS END=158735999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:44:0,111,1590:0,111,255:40,0 chr1 158736000 . A . PASS END=158736000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1460:0,77,255:40,0 chr1 158736001 . C . PASS END=158736067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:33:0,88,1144:0,88,255:40,0 chr1 158736068 . G . PASS END=158736117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,884:0,61,255:25,0 chr1 158736118 . C . PASS END=158736118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:24,0 chr1 158736119 . C . PASS END=158736131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1000:0,68,255:26,0 chr1 158736132 . A . PASS END=158736133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158736134 . A . PASS END=158736134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,921:0,65,255:26,0 chr1 158736135 . T . PASS END=158736166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1024:0,80,255:33,0 chr1 158736167 . A . PASS END=158736167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:32,0 chr1 158736168 . T . PASS END=158736177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1209:0,86,255:33,0 chr1 158736178 . G . PASS END=158736196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1162:0,93,255:32,0 chr1 158736197 . A . PASS END=158736197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 158736198 . A . PASS END=158736214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:32,0 chr1 158736215 . G A, 145.86 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,17,0:0,16,0:96:184,99,0,1248,99,1248:255,99,0:0,0:1.4586e+02,9.5858e+01,0.0000e+00,4.5000e+02,1.3063e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,17:0,0,14,19 chr1 158736216 . A . PASS END=158736221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:32,0 chr1 158736222 . T . PASS END=158736222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1004:0,79,255:31,0 chr1 158736223 . T . PASS END=158736229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:32,0 chr1 158736230 . C . PASS END=158736230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 158736231 . A . PASS END=158736237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:27,0 chr1 158736238 . G . PASS END=158736246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,71,255:24,0 chr1 158736247 . C . PASS END=158736247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:21,0 chr1 158736248 . A . PASS END=158736251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:25,0 chr1 158736252 . G . PASS END=158736252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 158736253 . T . PASS END=158736260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1180:0,83,255:30,0 chr1 158736261 . A . PASS END=158736261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1018:0,79,255:30,0 chr1 158736262 . G . PASS END=158736332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:38,0 chr1 158736333 . A . PASS END=158736333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 158736334 . G . PASS END=158736398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1040:0,87,255:36,0 chr1 158736399 . A . PASS END=158736399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1303:0,75,255:34,0 chr1 158736400 . T . PASS END=158736409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:36,0 chr1 158736410 . C . PASS END=158736410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:31,0 chr1 158736411 . T . PASS END=158736430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:30,0 chr1 158736431 . G . PASS END=158736456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:27,0 chr1 158736457 . A . PASS END=158736460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 158736461 . C . PASS END=158736464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 158736465 . G . PASS END=158736472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 158746472 . T . PASS END=158746658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:38:0,81,1216:0,81,255:40,0 chr1 158746659 . A . PASS END=158746659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:34,0 chr1 158746660 . T . PASS END=158746664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1268:0,94,255:36,0 chr1 158746665 . C . PASS END=158746665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:33,0 chr1 158746666 . T . PASS END=158746919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:38:0,98,1365:0,98,255:40,0 chr1 158746920 . C . PASS END=158746920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:37,1 chr1 158746921 . A . PASS END=158746921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:86:40:0,86,1423:0,86,255:38,1 chr1 158746922 . A . PASS END=158746922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1402:0,68,255:39,0 chr1 158746923 . A . PASS END=158747371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:36:0,82,1262:0,82,255:40,0 chr1 158747372 . G . PASS END=158747372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1224:0,58,255:30,0 chr1 158747373 . G . PASS END=158747391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 158747392 . A . PASS END=158747396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 158747397 . G . PASS END=158747397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 158747398 . C . PASS END=158747399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 158747400 . A . PASS END=158747400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:21,0 chr1 158747401 . G . PASS END=158747416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,71,255:23,0 chr1 158747417 . T . PASS END=158747417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 158747418 . T . PASS END=158747425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:33:21:0,33,495:0,63,255:13,0 chr1 158811944 . A . PASS END=158812208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:48:0,107,1800:0,107,255:40,0 chr1 158813069 . T . PASS END=158813205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:36:0,99,1485:0,108,255:40,0 chr1 158813745 . A . PASS END=158813856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:30:0,86,1000:0,86,255:40,0 chr1 158813857 . A . PASS END=158813857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:31,0 chr1 158813858 . T . PASS END=158813869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:31,0 chr1 158813870 . C . PASS END=158813874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 158813875 . C . PASS END=158813875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 158813876 . C . PASS END=158813890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:24:0,62,953:0,62,255:26,0 chr1 158813891 . A . PASS END=158813891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 158813892 . T . PASS END=158813892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,792:0,28,255:21,0 chr1 158813893 . C . PASS END=158813905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 158813906 . T . PASS END=158813912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:22:0,48,720:0,56,255:17,0 chr1 158815377 . A . PASS END=158815782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:29:0,80,1064:0,80,255:40,0 chr1 158815783 . T . PASS END=158815783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 158815784 . G . PASS END=158815784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 158815785 . T . PASS END=158815793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:30:0,75,1125:0,90,255:26,0 chr1 158817518 . A . PASS END=158817524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,108,1687:0,108,255:40,0 chr1 158817525 . T . PASS END=158817525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1668:0,75,255:40,0 chr1 158817526 . A . PASS END=158817706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:48:0,105,1602:0,105,255:40,0 chr1 158818980 . G . PASS END=158819027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:100:0,120,1800:0,255,255:40,0 chr1 158906701 . A . PASS END=158906953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:31:0,93,1186:0,93,255:40,0 chr1 158906954 . A . PASS END=158906954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 158906955 . A . PASS END=158906965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 158908187 . T . PASS END=158908332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:83:32:0,83,1222:0,83,255:40,0 chr1 158908870 . A . PASS END=158908873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 158908874 . G . PASS END=158908874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 158908875 . A . PASS END=158908883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 158908884 . A . PASS END=158908884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 158908885 . T . PASS END=158908885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 158908886 . C . PASS END=158908886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 158908887 . T . PASS END=158908887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 158908888 . G . PASS END=158908889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 158908890 . A . PASS END=158908890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 158908891 . G . PASS END=158908894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 158908895 . A . PASS END=158908896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,767:0,50,255:21,0 chr1 158908897 . A . PASS END=158908905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 158908906 . A . PASS END=158908906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 158908907 . A . PASS END=158908917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:23,0 chr1 158908918 . A . PASS END=158908918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 158908919 . T . PASS END=158908922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:22,0 chr1 158908923 . C . PASS END=158908923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 158908924 . A . PASS END=158908946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:25,0 chr1 158908947 . C . PASS END=158908947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 158908948 . T . PASS END=158908948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 158908949 . C . PASS END=158908956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 158908957 . G . PASS END=158908958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 158908959 . C . PASS END=158908960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158908961 . G . PASS END=158908967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 158908968 . C . PASS END=158908968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158908969 . A . PASS END=158908971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:25,0 chr1 158908972 . G . PASS END=158908972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 158908973 . C . PASS END=158908973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 158908974 . C . PASS END=158908987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1062:0,84,255:28,0 chr1 158908988 . C . PASS END=158909003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:25,0 chr1 158909004 . A . PASS END=158909004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 158909005 . T . PASS END=158909015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,892:0,72,255:25,0 chr1 158909016 . A . PASS END=158909016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 158909017 . C . PASS END=158909017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 158909018 . C . PASS END=158909024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 158909025 . T . PASS END=158909034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 158909035 . G . PASS END=158909036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:27:0,57,855:0,67,255:19,0 chr1 158909037 . G . PASS END=158909037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 158909193 . G . PASS END=158909194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 158909195 . A . PASS END=158909195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 158909196 . T . PASS END=158909201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1255:0,86,255:33,0 chr1 158909202 . A . PASS END=158909351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:34:0,86,1255:0,86,255:40,0 chr1 158911767 . A . PASS END=158912189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:53:0,117,1755:0,136,255:40,0 chr1 158913580 . A . PASS END=158913765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:81:40:0,81,1215:0,113,255:40,1 chr1 158913766 . C . PASS END=158913768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 158914665 . A . PASS END=158914666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 158914667 . A . PASS END=158914667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,734:0,58,255:22,0 chr1 158914668 . C . PASS END=158914675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 158914676 . T . PASS END=158914676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 158914677 . A . PASS END=158914681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,828:0,78,255:26,0 chr1 158914682 . C . PASS END=158914683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 158914684 . A . PASS END=158914684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 158914685 . G . PASS END=158914832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:29:0,87,995:0,87,255:40,0 chr1 158943437 . A . PASS END=158943501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:44:0,116,1596:0,116,255:40,0 chr1 158943502 . G . PASS END=158943538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:62:0,120,1800:0,149,255:40,0 chr1 158943539 . C T, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.646;ReadPosRankSum=1.146;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,30,0:0.500,0.000:60:12,14,0:18,16,0:47:85,0,47,185,185,185:255,0,255:28,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,15,11,19:17,13,9,21 chr1 158943540 . A . PASS END=158943556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,149,255:40,0 chr1 158946491 . G . PASS END=158946517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:62:0,120,1800:0,179,255:40,0 chr1 158957599 . A . PASS END=158957628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,3:93:99:90:0,120,1800:0,205,255:40,1 chr1 158958633 . A . PASS END=158958647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,106,1407:0,106,255:40,0 chr1 158969761 . T . PASS END=158970101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1152:0,84,255:40,0 chr1 158970102 . T . PASS END=158970102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1156:0,78,255:27,0 chr1 158984459 . A . PASS END=158984735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:38:0,84,1149:0,84,255:40,0 chr1 158985662 . T . PASS END=158985742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:30:0,81,1141:0,89,255:40,0 chr1 158985743 . A . PASS END=158985743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:32,0 chr1 158985744 . A . PASS END=158985749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:33,0 chr1 158985750 . A . PASS END=158985750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:28,0 chr1 158985751 . G . PASS END=158985761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1164:0,85,255:31,0 chr1 158985762 . A . PASS END=158985775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:26,0 chr1 158985776 . A . PASS END=158985776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 158985777 . G . PASS END=158985777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 158986323 . A . PASS END=158986323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 158986324 . A . PASS END=158986324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 158986325 . A . PASS END=158986326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:25,0 chr1 158986327 . G . PASS END=158986327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 158986328 . A . PASS END=158986328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 158986329 . A . PASS END=158986332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 158986333 . A . PASS END=158986333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 158986334 . A . PASS END=158986334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 158986335 . T . PASS END=158986335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 158986336 . C . PASS END=158986340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 158986341 . A . PASS END=158986344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 158986345 . A . PASS END=158986346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1149:0,90,255:31,0 chr1 158986347 . A . PASS END=158986348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1049:0,76,255:31,0 chr1 158986349 . G . PASS END=158986439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:32:0,95,1150:0,95,255:40,0 chr1 158986440 . C . PASS END=158986451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1190:0,83,255:33,0 chr1 158986452 . A . PASS END=158986452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 158986453 . C . PASS END=158986454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr1 158986455 . T . PASS END=158986455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr1 158986456 . C . PASS END=158986456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 158986457 . A . PASS END=158986458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 158986459 . T . PASS END=158986459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 158986460 . G . PASS END=158986463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 158986464 . G . PASS END=158986476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,67,255:24,0 chr1 158986477 . G C, 50.00 PASS DP=27;MQ=245.71;MQRankSum=1.488;ReadPosRankSum=-0.073;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:7,9,0:5,6,0:47:85,0,46,185,185,185:255,0,255:10,0:5.0000e+01,9.4744e-05,4.9275e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,9,5,10:4,8,7,8 chr1 158986478 . T . PASS END=158986478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 158986479 . T . PASS END=158986479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 158986480 . C . PASS END=158986480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 158986481 . T . PASS END=158986481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 158986482 . T . PASS END=158986483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 158986484 . A . PASS END=158986490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,678:0,49,255:19,0 chr1 158988019 . A . PASS END=158988437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:44:0,81,1215:0,120,255:40,0 chr1 158988438 . T . PASS END=158988441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:66:40:0,66,990:0,120,255:23,0 chr1 158990131 . A . PASS END=158990209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,150,255:40,0 chr1 158990210 . G . PASS END=158990246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:43:0,120,1800:0,128,255:40,0 chr1 158990247 . A G, 182.43 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,22,0:0,23,0:132:220,135,0,1737,135,1737:255,135,0:0,0:1.8243e+02,1.3243e+02,0.0000e+00,4.5000e+02,1.6720e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,26:0,0,28,17 chr1 158990248 . C . PASS END=158990284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:39:0,102,1382:0,103,255:40,0 chr1 158990285 . C . PASS END=158990306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:35:0,96,1410:0,101,255:36,0 chr1 158990307 . T . PASS END=158990319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:24:0,60,900:0,72,255:24,0 chr1 159002314 . A . PASS END=159002336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 159002337 . A . PASS END=159002352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,640:0,60,255:25,0 chr1 159002353 . A . PASS END=159002356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 159002357 . T . PASS END=159002357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 159002358 . G . PASS END=159002384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1111:0,82,255:34,0 chr1 159002385 . T . PASS END=159002385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1278:0,56,255:32,0 chr1 159002386 . C . PASS END=159002453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1141:0,82,255:39,0 chr1 159002454 . A . PASS END=159002454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,992:0,60,255:27,0 chr1 159002455 . A . PASS END=159002460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1056:0,87,255:29,0 chr1 159002461 . T . PASS END=159002461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 159002462 . C . PASS END=159002469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1017:0,87,255:29,0 chr1 159002470 . T . PASS END=159002470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 159002471 . T . PASS END=159002477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:28,0 chr1 159002478 . C . PASS END=159002481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 159015087 . A . PASS END=159015091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 159015092 . T . PASS END=159015094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 159015095 . A . PASS END=159015099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,360:0,33,255:11,0 chr1 159015100 . C . PASS END=159015101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 159015102 . A . PASS END=159015105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 159015106 . C . PASS END=159015106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr1 159015107 . C . PASS END=159015107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 159015108 . A . LowGQ END=159015108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,327:3,0,255:11,0 chr1 159015109 . A . PASS END=159015120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,338:0,33,255:12,0 chr1 159015121 . T . PASS END=159015121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 159015122 . C . PASS END=159015125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 159015126 . A . PASS END=159015126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 159015127 . G . PASS END=159015127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 159015128 . G . PASS END=159015136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr1 159015137 . A . PASS END=159015137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 159015138 . C . PASS END=159015143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 159015144 . G . PASS END=159015144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 159015145 . A . PASS END=159015147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 159015148 . G . PASS END=159015151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 159015152 . T . PASS END=159015152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 159015153 . C . PASS END=159015156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 159015157 . T . PASS END=159015166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 159015167 . G . PASS END=159015168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 159015169 . T . PASS END=159015169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 159015170 . C . PASS END=159015173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 159015174 . A . PASS END=159015174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 159015175 . C . PASS END=159015175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 159015176 . C . PASS END=159015176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:23,0 chr1 159015177 . A . PASS END=159015178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:25:0,74,925:0,74,255:29,0 chr1 159015179 . C . PASS END=159015243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1028:0,82,255:34,0 chr1 159015244 . T . PASS END=159015244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,910:0,60,255:29,0 chr1 159015245 . C . PASS END=159015251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1090:0,93,255:31,0 chr1 159015252 . A . PASS END=159015252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 159015253 . C . PASS END=159015253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 159015254 . G . PASS END=159015254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 159017359 . G . PASS END=159017412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,169,255:40,0 chr1 159019222 . A . LowGQ END=159019253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,16:0,0,24:3,0 chr1 159019254 . C . PASS END=159019255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 159019256 . T . PASS END=159019260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 159019261 . A . PASS END=159019262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 159019263 . G . PASS END=159019265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,22,255:11,0 chr1 159019266 . G . PASS END=159019274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 159019275 . G . PASS END=159019291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 159019292 . T . PASS END=159019312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:26,0 chr1 159019313 . G . PASS END=159019316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr1 159019317 . A . PASS END=159019317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 159019318 . G . PASS END=159019324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1172:0,93,255:33,0 chr1 159019325 . C . PASS END=159019325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr1 159019326 . T . PASS END=159019330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1090:0,99,255:33,0 chr1 159019331 . G . PASS END=159019331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:31,0 chr1 159019332 . C . PASS END=159019338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1242:0,102,255:37,0 chr1 159019339 . C . PASS END=159019339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:35,0 chr1 159019340 . A . PASS END=159019389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1241:0,95,255:38,0 chr1 159021469 . T . PASS END=159021482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1286:0,89,255:38,0 chr1 159021483 . G . PASS END=159021490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,110,1390:0,110,255:40,0 chr1 159021491 . A . PASS END=159021491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1413:0,71,255:38,0 chr1 159021492 . A . PASS END=159021670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:37:0,85,1321:0,85,255:40,0 chr1 159021671 . A . PASS END=159021671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr1 159021672 . G . PASS END=159021888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:89:38:0,89,1449:0,89,255:40,0 chr1 159022110 . A . PASS END=159022140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:92:0,120,1800:0,255,255:40,0 chr1 159023323 . A . PASS END=159023514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:34:0,87,1305:0,98,255:40,0 chr1 159024611 . G . PASS END=159024630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,111,1620:0,111,255:40,0 chr1 159024631 . C . PASS END=159024667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:52:0,120,1800:0,138,255:40,0 chr1 159024668 . A T, 47.81 PASS DP=55;MQ=250.00;MQRankSum=6.271;ReadPosRankSum=0.964;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,23,0:0.418,0.000:55:13,12,0:19,11,0:47:83,0,50,760,1050,1810:255,0,255:29,0:4.7806e+01,9.3708e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,16,14,9:15,17,13,10 chr1 159024669 . C . PASS END=159024691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:92:46:0,92,1596:0,92,255:40,0 chr1 159032482 . C . PASS END=159032485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:77:0,120,1800:0,195,255:40,0 chr1 159032486 . G . PASS END=159032487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,6:78:1:78:0,1,2165:0,1,255:40,10 chr1 159032488 . T . PASS END=159032508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:76:0,120,1800:0,157,255:40,0 chr1 159033276 . C . PASS END=159033464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,110,1800:0,110,255:40,0 chr1 159035700 . C . PASS END=159035727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:30:0,86,892:0,86,255:38,0 chr1 159035728 . A . PASS END=159035728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 159035729 . T . PASS END=159036119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:30:0,87,1080:0,90,255:40,0 chr1 159038358 . C . PASS END=159038358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 159038359 . T . PASS END=159038359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr1 159038360 . T . PASS END=159038360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1174:0,96,255:32,0 chr1 159038361 . A . PASS END=159038361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 159038362 . A . PASS END=159038368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1132:0,82,255:32,0 chr1 159038369 . G . PASS END=159038369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 159038370 . A . PASS END=159038373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1241:0,99,255:33,0 chr1 159038374 . A . PASS END=159038374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1032:0,66,255:31,0 chr1 159038375 . C . PASS END=159038387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1152:0,99,255:35,0 chr1 159038388 . A . PASS END=159038388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:35,0 chr1 159038389 . C . PASS END=159038412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1201:0,92,255:38,0 chr1 159038413 . A . PASS END=159038413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:34,0 chr1 159038414 . T . PASS END=159038467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,86,255:38,0 chr1 159038468 . T . PASS END=159038481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,80,255:26,0 chr1 159038482 . T . PASS END=159038486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:27:0,45,675:0,81,255:16,0 chr1 159038487 . A . PASS END=159038491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:21:0,39,585:0,47,255:13,0 chr1 159043028 . C . PASS END=159043040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1127:0,80,255:36,0 chr1 159043041 . C T, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.102;ReadPosRankSum=3.644;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,19,0:0.528,0.000:36:10,13,0:7,6,0:48:85,0,50,680,600,1280:255,0,255:17,0:5.0000e+01,6.6527e-05,5.2758e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,11,8:10,7,9,10 chr1 159043042 . T . PASS END=159043042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1333:0,108,255:36,0 chr1 159043043 . C . PASS END=159043043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:34,0 chr1 159043044 . C . PASS END=159043045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1380:0,111,255:37,0 chr1 159043046 . G . PASS END=159043046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr1 159043047 . A . PASS END=159043050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1303:0,95,255:37,0 chr1 159043051 . C . PASS END=159043051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr1 159043052 . G . PASS END=159043078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,107,1360:0,107,255:40,0 chr1 159043079 . T . PASS END=159043248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1176:0,81,255:40,0 chr1 159043249 . A . PASS END=159043250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr1 159043251 . G . PASS END=159043263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1225:0,96,255:32,0 chr1 159043264 . A . PASS END=159043264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 159043265 . G . PASS END=159043266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 159043267 . A . PASS END=159043267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 159043268 . T . PASS END=159043269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 159043270 . T . PASS END=159043289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 159141556 . A . PASS END=159141557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 159141558 . G . PASS END=159141558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 159141559 . G . PASS END=159141563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 159141564 . C . PASS END=159141564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 159141565 . C . PASS END=159141566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 159141567 . A . PASS END=159141567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 159141568 . G . PASS END=159141568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 159141569 . C . PASS END=159141569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 159141570 . C . PASS END=159141570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 159141571 . G . PASS END=159141576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:17,0 chr1 159141577 . C . PASS END=159141594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,762:0,62,255:26,0 chr1 159141595 . C . PASS END=159141598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:27,0 chr1 159141599 . T . PASS END=159141643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,939:0,65,255:26,0 chr1 159159561 . G . PASS END=159159581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:23,0 chr1 159159582 . T . PASS END=159159582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 159159583 . G . PASS END=159159587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:26,0 chr1 159159588 . T . PASS END=159159588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 159159589 . G . PASS END=159159612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 159159613 . G . PASS END=159159613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 159159614 . G . PASS END=159159616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159159617 . A . PASS END=159159618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 159159619 . C . PASS END=159159636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1064:0,87,255:29,0 chr1 159159637 . C . PASS END=159159646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 159159647 . A . PASS END=159159647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,837:0,34,255:22,0 chr1 159159648 . T . PASS END=159159648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 159159649 . G . PASS END=159159650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:25:0,42,884:0,42,255:24,0 chr1 159159651 . T . PASS END=159159662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 159160460 . G . PASS END=159160460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 159160461 . G . PASS END=159160461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 159160462 . C . PASS END=159160467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:18,0 chr1 159160468 . C . PASS END=159160468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 159160469 . T . PASS END=159160471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 159160472 . G . PASS END=159160502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr1 159160503 . A . PASS END=159160503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 159160504 . T . PASS END=159160538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 159160539 . A . PASS END=159160539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 159160540 . G . PASS END=159160542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 159160543 . A . PASS END=159160551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:17,0 chr1 159161324 . G . PASS END=159161378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,105,1449:0,114,255:40,0 chr1 159161726 . A . PASS END=159161726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 159161727 . C . PASS END=159161727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 159161728 . A . PASS END=159161732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 159161733 . G . PASS END=159161746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr1 159161747 . A . PASS END=159161748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 159161749 . G . PASS END=159161749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 159161750 . A . PASS END=159161750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 159161751 . A . PASS END=159161820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1111:0,80,255:35,0 chr1 159161821 . T . PASS END=159161822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 159161823 . G . PASS END=159161825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 159161826 . T . PASS END=159161847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,898:0,62,255:26,0 chr1 159161848 . T . PASS END=159161848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,808:0,9,255:20,0 chr1 159161849 . A . PASS END=159161849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:20,0 chr1 159161850 . C . PASS END=159161852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 159161853 . T . PASS END=159161853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:19,0 chr1 159161854 . G . PASS END=159161854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 159161855 . G . PASS END=159161856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 159161857 . G . PASS END=159161860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 159161861 . A . PASS END=159161861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:19,0 chr1 159161862 . G . PASS END=159161862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 159161863 . A . PASS END=159161866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 159162368 . C . PASS END=159162370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr1 159162371 . T . PASS END=159162371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1001:0,51,255:28,0 chr1 159162372 . T . PASS END=159162372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 159162373 . C . PASS END=159162373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 159162374 . G . PASS END=159162378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 159162379 . A . PASS END=159162380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:32:0,68,1064:0,68,255:31,0 chr1 159162381 . T . PASS END=159162511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:32:0,82,1133:0,82,255:40,0 chr1 159162512 . C . PASS END=159162520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:25,0 chr1 159163213 . G . PASS END=159163335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1172:0,83,255:40,0 chr1 159163336 . A . PASS END=159163346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,80,255:26,0 chr1 159163347 . C . PASS END=159163350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 159163660 . G . PASS END=159163661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 159163662 . G . PASS END=159163799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,940:0,81,255:40,0 chr1 159163800 . A . PASS END=159163800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:27,0 chr1 159163801 . G . PASS END=159163805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:29,0 chr1 159163806 . A . PASS END=159163807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:27,0 chr1 159163808 . C . PASS END=159163821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,67,255:26,0 chr1 159163822 . A . PASS END=159163830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,706:0,46,255:17,0 chr1 159166154 . A . PASS END=159166154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 159166155 . C . PASS END=159166169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:33,0 chr1 159166170 . G . PASS END=159166170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:30,0 chr1 159166171 . A . PASS END=159166235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,87,255:39,0 chr1 159166236 . C . PASS END=159166237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 159166238 . A . PASS END=159166240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159166241 . C . PASS END=159166244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 159166681 . C . PASS END=159166691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 159166692 . A . PASS END=159166709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:26,0 chr1 159166710 . G . PASS END=159166825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:37,0 chr1 159166826 . G . PASS END=159166844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:23,0 chr1 159166845 . T . PASS END=159166846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 159166847 . A . PASS END=159166847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159166848 . A . PASS END=159166850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 159169541 . A . PASS END=159169546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 159169547 . G . PASS END=159169603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1008:0,81,255:40,0 chr1 159169604 . T . PASS END=159169640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:37:0,87,1395:0,87,255:40,0 chr1 159169641 . T C, 149.32 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,12,0:0,22,0:99:187,102,0,1294,102,1294:255,102,0:0,0:1.4932e+02,9.9321e+01,0.0000e+00,4.5000e+02,1.3409e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,20:0,0,14,20 chr1 159169642 . G . PASS END=159169647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:33,0 chr1 159169648 . T . PASS END=159169648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 159169649 . A . PASS END=159169663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:29,0 chr1 159169664 . A . PASS END=159169666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 159170594 . G . PASS END=159170611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 159170612 . A . PASS END=159170636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1094:0,80,255:30,0 chr1 159170637 . A . PASS END=159170637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 159170638 . G . PASS END=159170642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1155:0,90,255:32,0 chr1 159170643 . G . PASS END=159170643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 159170644 . G . PASS END=159170648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1194:0,96,255:32,0 chr1 159170649 . G A, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=3.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,18,0:0.562,0.000:32:9,10,0:5,8,0:47:85,0,46,185,185,185:255,0,255:12,0:5.0000e+01,9.5003e-05,4.9250e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,6,5,13:9,5,13,5 chr1 159170650 . G . PASS END=159170674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:28,0 chr1 159170675 . A . PASS END=159170675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 159170676 . G . PASS END=159170678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 159170679 . A . PASS END=159170686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 159170687 . A . PASS END=159170699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,901:0,65,255:25,0 chr1 159170700 . A . PASS END=159170700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 159170701 . T . PASS END=159170704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 159170705 . T . PASS END=159170705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 159170706 . C . PASS END=159170709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 159170710 . T . PASS END=159170710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 159170711 . A . PASS END=159170712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 159174750 . A . PASS END=159174761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:30,0 chr1 159174762 . C . PASS END=159174762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 159174763 . T . PASS END=159174767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 159174768 . A . PASS END=159174770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 159175224 . A . PASS END=159175230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,908:0,72,255:24,0 chr1 159175231 . C . PASS END=159175238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1164:0,83,255:37,0 chr1 159175239 . T . PASS END=159175239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 159175240 . A . PASS END=159175316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,101,1390:0,101,255:40,0 chr1 159175317 . T . PASS END=159175353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:42:0,96,1476:0,96,255:40,0 chr1 159175354 . G A, 191.46 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,24,0:0,24,0:141:229,144,0,1844,144,1844:255,144,0:0,0:1.9146e+02,1.4146e+02,0.0000e+00,4.5000e+02,1.7623e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,26:0,0,32,16 chr1 159175355 . T . PASS END=159175391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,124,255:40,0 chr1 159175392 . A . PASS END=159175472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,92,255:40,0 chr1 159175473 . A . PASS END=159175473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 159175474 . T . PASS END=159175479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 159175480 . T . PASS END=159175480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 159175481 . C . PASS END=159175487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 159175488 . C . PASS END=159175539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:26,0 chr1 159175540 . T . PASS END=159175540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 159175541 . G . PASS END=159175570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 159175571 . C . PASS END=159175571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:22,0 chr1 159175572 . G . PASS END=159175583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 159175584 . G . PASS END=159175591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:27,0 chr1 159175592 . T . PASS END=159175638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,65,255:26,0 chr1 159175639 . A . PASS END=159175639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 159175640 . T . PASS END=159175643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 159175644 . T . PASS END=159175658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,737:0,57,255:19,0 chr1 159175659 . G . PASS END=159175662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 159175663 . T . PASS END=159175664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 159175665 . C . PASS END=159175678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 159175679 . T . PASS END=159175698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 159175699 . T . PASS END=159175699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 159175700 . G . PASS END=159175704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 159175705 . C . PASS END=159175705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 159175706 . A . PASS END=159175713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 159175714 . T . PASS END=159175722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr1 159175723 . T . PASS END=159175723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 159175724 . C . PASS END=159175726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 159175727 . C . PASS END=159175737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 159175738 . C . PASS END=159175740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159175741 . T . PASS END=159175744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159175745 . A . PASS END=159175751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159175752 . G . PASS END=159175754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 159175755 . G . PASS END=159175757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 159175758 . G . PASS END=159175758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 159175759 . C . PASS END=159175814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,884:0,62,255:25,0 chr1 159175815 . A . PASS END=159175815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 159175816 . C . PASS END=159175822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:25,0 chr1 159175823 . A . PASS END=159175829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 159175830 . A . PASS END=159175830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 159175831 . C . PASS END=159175838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 159175839 . A . PASS END=159175860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:25,0 chr1 159175861 . C . PASS END=159175864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 159175865 . A . PASS END=159175878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr1 159175879 . T . PASS END=159175879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 159175880 . C . PASS END=159175893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 159175894 . C . PASS END=159175931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,598:0,48,255:21,0 chr1 159175932 . T . PASS END=159175940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 159175941 . G . PASS END=159175941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 159175942 . G . PASS END=159175955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 159175956 . A . PASS END=159175965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:12,0 chr1 159175966 . T . PASS END=159175966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:10,0 chr1 159175967 . G . PASS END=159175977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr1 159175978 . T . PASS END=159175978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 159175979 . T . PASS END=159175987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 159175988 . G . PASS END=159175988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 159175989 . T . PASS END=159175990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 159175991 . G . PASS END=159175992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 159175993 . C . PASS END=159175998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr1 159175999 . G . PASS END=159176003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 159176004 . G . PASS END=159176016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 159176017 . A . PASS END=159176044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,713:0,60,255:26,0 chr1 159176045 . G . PASS END=159176048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 159176049 . T . PASS END=159176049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 159176050 . C . PASS END=159176066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:30,0 chr1 159176067 . C . PASS END=159176067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 159176068 . A . PASS END=159176116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1127:0,93,255:34,0 chr1 159176117 . C . PASS END=159176118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 159176119 . G . PASS END=159176125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 159176126 . T . PASS END=159176126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:27,0 chr1 159176127 . A . PASS END=159176131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 159176132 . C . PASS END=159176132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 159176133 . C . PASS END=159176144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:29,0 chr1 159176145 . C . PASS END=159176176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 159176177 . G . PASS END=159176202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:18:0,41,601:0,41,255:19,0 chr1 159176203 . G . PASS END=159176203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,560:0,23,255:16,0 chr1 159176204 . G . PASS END=159176219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 159176220 . A . PASS END=159176240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr1 159272155 . A . PASS END=159272209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,143,255:40,0 chr1 159272644 . C . PASS END=159272664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:75:0,120,1800:0,212,255:40,0 chr1 159273718 . T . PASS END=159273972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:96:32:0,96,1083:0,96,255:40,0 chr1 159275778 . A . PASS END=159275781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 159275782 . G . PASS END=159275782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 159275783 . C . PASS END=159275789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:17,0 chr1 159275790 . T . PASS END=159275791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 159275792 . C . PASS END=159275803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,637:0,41,255:19,0 chr1 159275804 . G . PASS END=159275820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr1 159275821 . C . PASS END=159275821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 159275822 . C . PASS END=159275834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,953:0,62,255:24,0 chr1 159275835 . T . PASS END=159275835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:22,0 chr1 159275836 . C . PASS END=159275851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 159275852 . A . PASS END=159275852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 159275853 . G . PASS END=159275861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,978:0,75,255:26,0 chr1 159275862 . A . PASS END=159275862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 159275863 . T . PASS END=159275864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1008:0,71,255:27,0 chr1 159275865 . T . PASS END=159275873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1249:0,89,255:34,0 chr1 159275874 . T . PASS END=159275875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 159275876 . A . PASS END=159275877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1278:0,89,255:35,0 chr1 159275878 . C . PASS END=159275879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:34,0 chr1 159275880 . A . PASS END=159276001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:39:0,82,1350:0,82,255:40,0 chr1 159276002 . G . PASS END=159276012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:31:0,63,945:0,78,255:25,0 chr1 159276013 . C . PASS END=159276013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 159276014 . C . PASS END=159276015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 159276016 . C . PASS END=159276016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 159276017 . A . PASS END=159276018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 159276019 . C . PASS END=159276019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 159276020 . A . PASS END=159276023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 159276024 . C . PASS END=159276035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 159277538 . C . PASS END=159277702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:36:0,81,1215:0,108,255:40,0 chr1 159277703 . C . PASS END=159277705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 159277706 . A . PASS END=159277707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159277708 . C . PASS END=159277720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:27:0,66,990:0,71,255:26,0 chr1 159277721 . G . PASS END=159277721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:20,0 chr1 159277722 . A . PASS END=159277722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 159283460 . T . PASS END=159283463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:22,0 chr1 159283464 . T . PASS END=159283464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 159283465 . A . PASS END=159283467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 159283468 . T . PASS END=159283468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 159283469 . A . PASS END=159283473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 159283474 . T . PASS END=159283474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 159283475 . A . PASS END=159283486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 159283487 . A . PASS END=159283489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 159283490 . G . PASS END=159283490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 159283491 . C . PASS END=159283491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 159283492 . C . PASS END=159283492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:29,0 chr1 159283493 . T . PASS END=159283494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1123:0,66,255:30,0 chr1 159283495 . C . PASS END=159283501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1133:0,80,255:33,0 chr1 159283502 . T . PASS END=159283502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:31,0 chr1 159283503 . C . PASS END=159283523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:33:0,92,1166:0,92,255:35,0 chr1 159283524 . T . PASS END=159283524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1170:0,75,255:31,0 chr1 159283525 . T . PASS END=159283525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:32,0 chr1 159283526 . T . PASS END=159283526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr1 159283527 . T . PASS END=159283547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1257:0,89,255:35,0 chr1 159283548 . G . PASS END=159283548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:29,0 chr1 159283549 . A . PASS END=159283551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1141:0,82,255:29,0 chr1 159283552 . A . PASS END=159283553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:30:0,54,1009:0,54,255:28,0 chr1 159283554 . C . PASS END=159283558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 159283559 . A . PASS END=159283559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr1 159283560 . C . PASS END=159283561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 159283562 . T . PASS END=159283562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 159283563 . C . PASS END=159283564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr1 159283565 . T . PASS END=159283565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 159283566 . T . PASS END=159283572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 159283573 . C . PASS END=159283573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,984:0,29,255:27,0 chr1 159283574 . A . PASS END=159283574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 159283575 . G . PASS END=159283575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 159283576 . G . PASS END=159283580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 159283581 . A . PASS END=159283584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 159283585 . A . PASS END=159283588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:27:0,74,1086:0,74,255:26,0 chr1 159283589 . G . PASS END=159283599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 159283600 . G . PASS END=159283602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 159283603 . A . PASS END=159283603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:22,0 chr1 159283604 . G . PASS END=159283625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,884:0,72,255:24,0 chr1 159283626 . A . PASS END=159283626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 159283627 . T . PASS END=159283651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,64,255:23,0 chr1 159283652 . C . PASS END=159283652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 159283653 . T . PASS END=159283653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159283654 . G . PASS END=159283655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 159283656 . G . PASS END=159283660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 159283661 . A . PASS END=159283661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 159283662 . G . PASS END=159283695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:26,0 chr1 159283696 . G . PASS END=159283697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 159283698 . A . PASS END=159283699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 159283700 . G . PASS END=159283700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159283701 . A . PASS END=159283704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:26,0 chr1 159283705 . C . PASS END=159283708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 159283709 . T . PASS END=159283745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1208:0,83,255:33,0 chr1 159283746 . T C, 48.98 PASS DP=34;MQ=249.71;MQRankSum=4.301;ReadPosRankSum=4.925;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:10,7,0:9,8,0:48:84,0,50,528,680,1208:255,0,255:18,0:4.8977e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,9,6:12,7,5,10 chr1 159283747 . G . PASS END=159283771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:33,0 chr1 159283772 . A . PASS END=159283772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr1 159283773 . A . PASS END=159283773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 159283774 . T . PASS END=159283774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1077:0,46,255:26,0 chr1 159283775 . G . PASS END=159283783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:32,0 chr1 159283784 . G . PASS END=159284449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1151:0,81,255:40,0 chr1 159401994 . A . PASS END=159402252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:39:0,90,1518:0,90,255:40,0 chr1 159402253 . T . PASS END=159402289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:58:0,120,1800:0,140,255:40,0 chr1 159402290 . C T, 47.83 PASS DP=55;MQ=250.00;MQRankSum=6.271;ReadPosRankSum=2.449;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,23,0:0.418,0.000:55:14,8,0:18,15,0:47:83,0,50,806,1108,1914:255,0,255:31,0:4.7831e+01,9.3190e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,13,9,14:15,17,16,7 chr1 159402291 . G . PASS END=159402327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:49:0,111,1647:0,111,255:40,0 chr1 159402328 . A . PASS END=159402456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,95,255:40,0 chr1 159402457 . G . PASS END=159402457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:40,0 chr1 159402458 . C . PASS END=159402541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:43:0,96,1623:0,96,255:40,0 chr1 159402542 . G . PASS END=159402557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:50:0,87,1305:0,145,255:39,0 chr1 159402558 . G . PASS END=159402567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:69:49:0,69,1035:0,137,255:26,0 chr1 159402568 . A . PASS END=159402568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:57:48:0,57,855:0,144,255:19,0 chr1 159402569 . C . PASS END=159402573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:60:48:0,60,900:0,144,255:20,0 chr1 159402574 . C . PASS END=159402583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:51:46:0,51,765:0,103,255:18,0 chr1 159402584 . G GT, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.831;ReadPosRankSum=0.481;FractionInformativeReads=0.959;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,26,0:0.553,0.000:47:9,11,0:12,15,0:48:79,0,49,834,649,1483:255,0,255:19,34:5.0000e+01,7.1187e-05,5.1934e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:10,11,14,12:14,7,17,9 chr1 159402585 . T . LowGQ END=159402585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,23:47:0:47:0,0,47:255,0,255:40,0 chr1 159402586 . T . PASS END=159402627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,122,255:40,0 chr1 159402628 . G . PASS END=159402657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,117,1784:0,117,255:40,0 chr1 159402658 . T . PASS END=159402694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,108,1520:0,110,255:40,0 chr1 159402695 . A C, 49.62 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=3.014;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:12,13,0:12,8,0:48:84,0,50,751,842,1593:255,0,255:20,0:4.9623e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,10,11:14,10,10,11 chr1 159402696 . G . PASS END=159402732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:41:0,93,1359:0,93,255:40,0 chr1 159402733 . A . PASS END=159402908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1164:0,80,255:40,0 chr1 159402909 . G . PASS END=159402909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 159402910 . C . PASS END=159402919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 159402920 . C . PASS END=159402928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 159409549 . A . PASS END=159409570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1635:0,119,255:40,0 chr1 159409571 . G . PASS END=159409696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,117,1672:0,117,255:40,0 chr1 159409697 . T . PASS END=159409733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,157,255:40,0 chr1 159409734 . G T, 215.08 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,29,0:0,27,0:165:253,168,0,2125,168,2125:255,168,0:0,0:2.1508e+02,1.6508e+02,0.0000e+00,4.5000e+02,1.9985e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,37:0,0,26,30 chr1 159409735 . G . PASS END=159409771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,102,1692:0,102,255:40,0 chr1 159409772 . G . PASS END=159409819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:41:0,90,1350:0,100,255:40,0 chr1 159409820 . G . PASS END=159409856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,108,1527:0,110,255:40,0 chr1 159409857 . A G, 49.74 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=4.746;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,21,0:0.477,0.000:44:10,9,0:13,12,0:48:85,0,50,693,814,1508:255,0,255:22,0:4.9745e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,13,8:9,14,11,10 chr1 159409858 . T . PASS END=159409894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,116,1651:0,116,255:40,0 chr1 159409895 . T . PASS END=159410505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1119:0,81,255:40,2 chr1 159410506 . T . PASS END=159410506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 159410507 . C . PASS END=159410511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 159504868 . T . PASS END=159504889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,764:0,69,255:25,0 chr1 159504890 . A . PASS END=159504978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:30:0,85,1180:0,85,255:40,0 chr1 159504979 . G . PASS END=159504979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:30,0 chr1 159504980 . A . PASS END=159504992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1119:0,82,255:33,0 chr1 159504993 . T . PASS END=159504993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:30,0 chr1 159504994 . T . PASS END=159505007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1180:0,85,255:31,0 chr1 159505008 . C . PASS END=159505008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr1 159505009 . T . PASS END=159505027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1158:0,96,255:36,0 chr1 159505028 . G . PASS END=159505028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr1 159505029 . C . PASS END=159505181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:35:0,89,1263:0,89,255:40,0 chr1 159505182 . T . PASS END=159505182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 159505183 . C . PASS END=159505186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:34,0 chr1 159505187 . A . PASS END=159505187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:34,0 chr1 159505188 . A . PASS END=159505200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:35:0,80,1128:0,80,255:34,0 chr1 159505201 . A . PASS END=159505202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:31,0 chr1 159505203 . A . PASS END=159505230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:32:0,83,1156:0,83,255:37,0 chr1 159505231 . A . PASS END=159505231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr1 159505232 . A . PASS END=159505318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:36:0,80,1290:0,80,255:39,0 chr1 159505319 . A . PASS END=159505319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 159505320 . C . PASS END=159505408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:37:0,86,1398:0,86,255:40,0 chr1 159505409 . A . PASS END=159505409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1320:0,79,255:38,0 chr1 159505410 . G . PASS END=159505797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:42:0,105,1659:0,105,255:40,0 chr1 159557712 . A . PASS END=159557775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,119,1748:0,119,255:40,0 chr1 159557891 . A . PASS END=159558128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:34:0,84,1098:0,88,255:40,0 chr1 159558129 . C . PASS END=159558129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:33,0 chr1 159558130 . A . PASS END=159558135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1207:0,91,255:36,0 chr1 159558136 . A . PASS END=159558136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:34,0 chr1 159558137 . T . PASS END=159558150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1318:0,92,255:34,0 chr1 159558151 . G . PASS END=159558151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:29,0 chr1 159558152 . C . PASS END=159558153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1263:0,86,255:32,0 chr1 159558154 . C . PASS END=159558156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,990:0,99,255:26,0 chr1 159558157 . G . PASS END=159558220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1129:0,86,255:40,0 chr1 159558221 . C . PASS END=159558257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,118,1463:0,118,255:40,0 chr1 159558258 . A G, 182.44 PASS DP=46;MQ=247.28;FractionInformativeReads=0.978 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,22,0:0,23,0:132:220,135,0,1745,135,1745:255,135,0:0,0:1.8244e+02,1.3244e+02,0.0000e+00,4.5000e+02,1.6721e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,22:0,0,20,25 chr1 159558259 . G . PASS END=159558295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1366:0,100,255:40,0 chr1 159558296 . A . PASS END=159558366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,91,255:36,0 chr1 159558367 . T . PASS END=159558367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 159558368 . C . PASS END=159558378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:28,0 chr1 159558379 . C . PASS END=159558399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 159558400 . T . PASS END=159558413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159558414 . T . PASS END=159558414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 159558415 . C . PASS END=159558416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 159558417 . C . PASS END=159558424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 159558425 . A . PASS END=159558430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 159558431 . T . PASS END=159558457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,725:0,63,255:26,0 chr1 159558458 . T . PASS END=159558458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 159558459 . C . PASS END=159558460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159558461 . G . PASS END=159558472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,47,255:16,0 chr1 159558473 . T . PASS END=159558473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:14,0 chr1 159558474 . C . PASS END=159558479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr1 159558480 . A . PASS END=159558480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:14,0 chr1 159558481 . C . PASS END=159558483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 159558484 . T . PASS END=159558490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:15:0,30,450:0,31,255:14,0 chr1 159558491 . G . PASS END=159558498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:13:0,24,360:0,39,255:9,0 chr1 159682233 . C . PASS END=159682233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr1 159683091 . G . PASS END=159683091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr1 159683315 . T . PASS END=159683315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 159683316 . C . PASS END=159683316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 159683317 . A . PASS END=159683317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 159683318 . G . PASS END=159683318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 159683319 . G . PASS END=159683322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,809:0,66,255:23,0 chr1 159683323 . A . PASS END=159683323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,766:0,53,255:21,0 chr1 159683324 . C . PASS END=159683325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 159683326 . G . PASS END=159683326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159683327 . C . PASS END=159683328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 159683329 . G . PASS END=159683333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 159683334 . T . PASS END=159683335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 159683336 . G . PASS END=159683345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 159683346 . T . PASS END=159683346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 159683347 . C . PASS END=159683928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:86:31:0,86,1263:0,86,255:40,0 chr1 159684186 . T . LowGQ END=159684186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,8:51:0:51:0,0,1167:17,0,255:40,0 chr1 159684215 . C . PASS END=159684275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,119,1800:0,119,255:40,0 chr1 159684665 . G T,A, 221.88 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,18,6,0:0.750,0.250,0.000:24:0,9,2,0:0,9,4,0:39:291,207,71,636,0,85,842,207,636,842:255,72,0:0,0:2.2188e+02,1.7188e+02,3.9361e+01,4.5000e+02,5.2500e-04,5.3001e+01,4.5000e+02,2.0665e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,9,15:0,0,12,12 chr1 159750891 . A . PASS END=159750909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 159750910 . A . PASS END=159750910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 159750911 . C . PASS END=159750951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 159750952 . T . PASS END=159750967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 159750968 . C . PASS END=159750969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 159750970 . A . PASS END=159750977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159750978 . T . PASS END=159750978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159750979 . T . PASS END=159750979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 159750980 . C . PASS END=159750993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 159750994 . G . PASS END=159751008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,712:0,44,255:19,0 chr1 159751009 . T . PASS END=159751010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 159751011 . T . PASS END=159751017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,47,255:14,0 chr1 159751018 . C . PASS END=159751020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 159751021 . A . PASS END=159751028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 159751029 . C . PASS END=159751056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 159751057 . T . PASS END=159751061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr1 159751062 . C . PASS END=159751067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 159751068 . C . LowGQ END=159751068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr1 159751069 . G . PASS END=159751075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 159751076 . C . PASS END=159751083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 159751084 . A . PASS END=159751107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:11,0 chr1 159751108 . A . PASS END=159751108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 159751109 . G . PASS END=159751113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 159751114 . A . PASS END=159751155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:9,0 chr1 159751156 . A . PASS END=159751156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 159751157 . G . PASS END=159751157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 159751943 . G . PASS END=159751943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159751944 . C . PASS END=159751955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 159751956 . A . PASS END=159751961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 159751962 . C . PASS END=159751962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 159751963 . T . PASS END=159751972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1050:0,90,255:30,0 chr1 159751973 . G . PASS END=159751973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 159751974 . G . PASS END=159752008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1260:0,90,255:39,0 chr1 159752009 . A . PASS END=159752009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:38,0 chr1 159752010 . A . PASS END=159752098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,102,255:40,0 chr1 159752099 . G . PASS END=159752128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 159770384 . A . PASS END=159770403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,175,255:40,0 chr1 159772205 . A . PASS END=159772245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,120,1800:0,135,255:40,0 chr1 159776386 . T . PASS END=159776406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,169,255:40,0 chr1 159777968 . T . PASS END=159777973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 159777974 . T . PASS END=159777974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 159777975 . G . PASS END=159777983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr1 159777984 . A . PASS END=159777984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159777985 . G . PASS END=159777988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 159777989 . G . PASS END=159777990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159777991 . C . PASS END=159777991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 159777992 . C . PASS END=159778006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1001:0,87,255:30,0 chr1 159778007 . A . PASS END=159778007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 159778008 . A . PASS END=159778012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 159778013 . A . PASS END=159778014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1022:0,76,255:28,0 chr1 159778015 . G . PASS END=159778017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 159778018 . C . PASS END=159778018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 159778019 . T . PASS END=159778041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1113:0,82,255:34,0 chr1 159778042 . A . PASS END=159778042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1263:0,64,255:30,0 chr1 159778043 . A . PASS END=159778233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,92,255:40,0 chr1 159778234 . G . PASS END=159778234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 159778751 . A . PASS END=159778775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,156:0,15,156:6,0 chr1 159778776 . T . PASS END=159778785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 159778786 . T . PASS END=159778786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 159778787 . C . PASS END=159778803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 159778804 . G . PASS END=159778823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 159778824 . A . PASS END=159778824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,282:0,16,255:10,0 chr1 159778825 . T . PASS END=159778875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,410:0,33,255:13,0 chr1 159778876 . T . PASS END=159778886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 159778887 . C . PASS END=159778896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr1 159778897 . T . PASS END=159778901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 159778902 . G . PASS END=159778902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 159778903 . G . PASS END=159778935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,545:0,48,255:16,0 chr1 159778936 . G . PASS END=159778936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 159778937 . G . PASS END=159778945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 159778946 . A . PASS END=159778946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 159778947 . G . PASS END=159778947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 159778948 . G . PASS END=159778948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 159778949 . G . PASS END=159778949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 159778950 . A . PASS END=159778964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr1 159778965 . C . PASS END=159778965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 159778966 . T . PASS END=159778971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr1 159778972 . G . PASS END=159778972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 159778973 . A . PASS END=159778973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 159778974 . G . PASS END=159778979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 159778980 . C . PASS END=159778980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 159778981 . C . PASS END=159778981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 159778982 . C . PASS END=159778982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 159778983 . T C, 50.00 PASS DP=16;MQ=162.23;MQRankSum=-2.332;ReadPosRankSum=0.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,10,0:0.625,0.000:16:5,4,0:1,6,0:47:85,0,48,355,212,567:255,0,182:6,0:5.0000e+01,7.9471e-05,5.0803e+01,3.5526e+02,2.4693e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,5,5:2,4,3,7 chr1 159778984 . G . PASS END=159778992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 159778993 . C . PASS END=159778993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 159778994 . A . PASS END=159778994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:12,0 chr1 159778995 . G . PASS END=159779020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 159779021 . A . PASS END=159779024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 159779025 . C . PASS END=159779026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 159779027 . G . PASS END=159779031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 159779032 . C . PASS END=159779033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 159779034 . G . PASS END=159779035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 159779192 . C . PASS END=159779203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 159779204 . G . PASS END=159779210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr1 159779211 . G . PASS END=159779211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 159779212 . C . PASS END=159779216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:17,0 chr1 159779217 . T . PASS END=159779217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 159779218 . C . PASS END=159779236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,592:0,41,255:19,0 chr1 159779237 . A . PASS END=159779239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159779240 . C . PASS END=159779259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,698:0,44,255:19,0 chr1 159779260 . C . PASS END=159779260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 159779261 . A . PASS END=159779279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:18,0 chr1 159779280 . G . PASS END=159779291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:20,0 chr1 159779292 . T . PASS END=159779292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 159779293 . C . PASS END=159779300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 159779301 . G . PASS END=159779301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 159779302 . T . PASS END=159779308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr1 159779309 . T . PASS END=159779309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 159779310 . C . PASS END=159779326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,856:0,69,255:25,0 chr1 159779327 . T . PASS END=159779327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:23,0 chr1 159779328 . T . PASS END=159779338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,893:0,75,255:26,0 chr1 159779339 . A . PASS END=159779345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 159779346 . T . PASS END=159779346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 159779347 . C . PASS END=159779349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 159779350 . T . PASS END=159779350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 159779351 . G . PASS END=159779361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 159779362 . A . PASS END=159779362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 159779363 . C . PASS END=159779363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 159779364 . C . PASS END=159779367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1108:0,74,255:26,0 chr1 159779368 . C . PASS END=159779371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 159779372 . T . PASS END=159779372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:26,0 chr1 159779373 . C . PASS END=159779374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 159779375 . T . PASS END=159779385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 159779386 . T . PASS END=159779386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr1 159779387 . C . PASS END=159779388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 159779389 . G . PASS END=159779390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 159779391 . A . PASS END=159779392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 159779393 . A . PASS END=159779393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 159779394 . G . PASS END=159779396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 159779397 . T . PASS END=159779397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr1 159779398 . G . PASS END=159779407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 159779408 . A . PASS END=159779408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 159779409 . C . PASS END=159779416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 159779417 . A . PASS END=159779429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 159779430 . T . PASS END=159779430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,883:0,31,255:22,0 chr1 159779431 . G . PASS END=159779440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,877:0,64,255:24,0 chr1 159779441 . A . PASS END=159779441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 159779442 . G . PASS END=159779448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 159779449 . G . PASS END=159779473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 159779884 . G . PASS END=159779893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 159779894 . C . PASS END=159779894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 159779895 . T . PASS END=159779902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 159779903 . T . PASS END=159779903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 159779904 . C . PASS END=159779921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,917:0,72,255:26,0 chr1 159779922 . G . PASS END=159779926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 159779927 . T . PASS END=159779927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 159779928 . T . PASS END=159779950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1049:0,84,255:30,0 chr1 159779951 . C . PASS END=159779951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 159779952 . C . PASS END=159779959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 159779960 . T . PASS END=159779960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 159779961 . A . PASS END=159779970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr1 159779971 . C . PASS END=159779990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,870:0,64,255:25,0 chr1 159779991 . T . PASS END=159779991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 159779992 . C . PASS END=159780003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 159780004 . C . PASS END=159780006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 159783279 . G . PASS END=159783341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:31:0,86,1225:0,86,255:40,0 chr1 159783342 . A . PASS END=159783342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,900:0,76,255:29,0 chr1 159783343 . C . PASS END=159783344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 159783947 . G . PASS END=159783957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:50:0,120,1800:0,134,255:40,0 chr1 159784011 . T . PASS END=159784082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:42:0,108,1620:0,122,255:40,0 chr1 159785218 . C . PASS END=159785220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 159785221 . G . PASS END=159785222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 159785223 . T . PASS END=159785223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 159785224 . C . PASS END=159785234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 159785235 . A . PASS END=159785238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 159785239 . T . PASS END=159785239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 159785240 . G . PASS END=159785246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,280:0,27,255:9,0 chr1 159785247 . A . PASS END=159785249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 159785326 . G . PASS END=159785333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,652:0,43,255:19,0 chr1 159785334 . T . PASS END=159785341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 159785342 . G . PASS END=159785342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 159785343 . T . PASS END=159785360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 159785361 . G . PASS END=159785361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 159785362 . C . PASS END=159785369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 159785370 . T C, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,9,0:0,14,0:66:154,69,0,884,69,884:255,69,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,10:0,0,13,10 chr1 159785371 . G . PASS END=159785371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:22,0 chr1 159785372 . A . PASS END=159785376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 159785377 . T . PASS END=159785377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 159785378 . C . PASS END=159785407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,870:0,72,255:24,0 chr1 159785408 . C . PASS END=159785424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:18,0 chr1 159785425 . A G, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,729,57,729:255,57,0:0,0:1.0418e+02,5.4182e+01,1.6567e-05,4.5000e+02,8.8952e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,10:0,0,10,9 chr1 159785426 . G . PASS END=159785445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 159785446 . T . PASS END=159785447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 159785448 . C . PASS END=159785451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 159796689 . A . PASS END=159796700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr1 159796701 . C A, 49.36 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.269;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:9,6,0:6,6,0:48:84,0,50,428,491,919:255,0,255:14,0:4.9362e+01,7.1964e-05,5.3000e+01,4.2797e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,8,4:7,8,6,6 chr1 159796702 . C . PASS END=159796728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,878:0,62,255:24,0 chr1 159799656 . C . PASS END=159799659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 159799660 . A . PASS END=159799660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 159799661 . C . PASS END=159799663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 159799664 . C . PASS END=159799666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 159799667 . A . PASS END=159799667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 159799668 . T . PASS END=159799670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 159799671 . C . PASS END=159799682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 159799683 . C . LowGQ END=159799683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:11,0 chr1 159799684 . C . PASS END=159799687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 159799688 . G . PASS END=159799689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 159799690 . G . PASS END=159799691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 159799692 . T . PASS END=159799692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 159799693 . G . PASS END=159799695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 159799696 . C . PASS END=159799696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 159799697 . A . PASS END=159799698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 159799699 . A . PASS END=159799699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,513:0,20,255:16,0 chr1 159799700 . G . PASS END=159799731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,607:0,41,255:19,0 chr1 159799732 . T . PASS END=159799732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr1 159799733 . C . PASS END=159799733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159799734 . C . PASS END=159799746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 159799747 . A . PASS END=159799757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:18,0 chr1 159799758 . C . PASS END=159799758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 159799759 . T . PASS END=159799759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 159799760 . A . PASS END=159799768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 159799769 . T . PASS END=159799788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:18:0,47,652:0,47,255:18,0 chr1 159799789 . G . PASS END=159799789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 159799790 . C . PASS END=159799790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 159799791 . T . PASS END=159799795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 159799796 . G . PASS END=159799825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 159799826 . C . PASS END=159799826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 159799827 . T . PASS END=159799835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 159799836 . C . PASS END=159799837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 159799838 . C . PASS END=159799838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 159799839 . G . PASS END=159799845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 159799846 . G . PASS END=159799846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 159799847 . G . PASS END=159799857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:23,0 chr1 159799858 . G . PASS END=159799858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 159799859 . C . PASS END=159799873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 159799874 . A . PASS END=159799874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:22,0 chr1 159799875 . G . PASS END=159799904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,845:0,62,255:23,0 chr1 159799905 . A . PASS END=159799905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 159799906 . C . PASS END=159799928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 159799929 . T . PASS END=159799934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:19,0 chr1 159799935 . A . PASS END=159799938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159799939 . A . PASS END=159799939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 159799940 . A . PASS END=159799941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 159799942 . G . PASS END=159799942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 159799943 . G . PASS END=159799944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 159799945 . C . PASS END=159799973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 159799974 . A . PASS END=159799974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 159799975 . G . PASS END=159799978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 159799979 . T . PASS END=159799979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 159799980 . A . PASS END=159799982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 159802666 . A . PASS END=159802667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 159802668 . G . PASS END=159802682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:26,0 chr1 159802683 . G . PASS END=159802971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1047:0,81,255:40,0 chr1 159803052 . C . PASS END=159803183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,102,1530:0,113,255:40,0 chr1 159803900 . G . PASS END=159804021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1255:0,89,255:40,0 chr1 159804974 . G . PASS END=159805050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,110,1499:0,110,255:40,0 chr1 159806875 . G . PASS END=159806876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 159806877 . C . PASS END=159807101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:27:0,81,1023:0,81,255:40,0 chr1 159807708 . T . PASS END=159807817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,176,255:40,0 chr1 159810501 . C . PASS END=159810503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 159810504 . T . PASS END=159810512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 159810513 . G . PASS END=159810521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 159810522 . A . PASS END=159810522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 159810523 . G . PASS END=159810525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 159810526 . A . PASS END=159810526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 159810527 . G . PASS END=159810535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1003:0,80,255:32,0 chr1 159810536 . A . PASS END=159810536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr1 159810537 . G . PASS END=159810599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:32:0,91,1202:0,91,255:40,0 chr1 159810600 . G . PASS END=159810600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1488:0,71,255:39,0 chr1 159810601 . C . PASS END=159810656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1219:0,86,255:37,0 chr1 159810916 . C . PASS END=159811010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:39:0,81,1215:0,113,255:40,0 chr1 159811011 . C . PASS END=159811023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:25,0 chr1 159811024 . A . PASS END=159811024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:19,0 chr1 159811025 . G . PASS END=159811025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 159824543 . T . PASS END=159824558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr1 159824559 . T . PASS END=159824562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,178:0,15,178:5,0 chr1 159824563 . T . LowGQ END=159824563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 159824564 . G . PASS END=159824568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 159824569 . G . PASS END=159824592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 159824593 . C . PASS END=159824593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 159824594 . C . PASS END=159824609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 159824610 . A . PASS END=159824610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 159824611 . C . PASS END=159824616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 159824617 . C . PASS END=159824631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 159824632 . G . PASS END=159824657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 159824658 . G . PASS END=159824658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 159824659 . T . PASS END=159824666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 159824667 . G . PASS END=159824667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 159824668 . C . PASS END=159824681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 159824682 . T . PASS END=159824682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 159824683 . C . PASS END=159824687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 159824688 . C . PASS END=159824688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 159824689 . C . PASS END=159824706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,559:0,45,255:19,0 chr1 159824707 . C . PASS END=159824708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159824709 . T . PASS END=159824790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:19,0 chr1 159824791 . T . PASS END=159824816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 159824966 . T . PASS END=159824966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1234:0,91,255:32,0 chr1 159824967 . G C, 154.89 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,14,0:0,22,0:105:193,108,0,1366,108,1366:255,108,0:0,0:1.5489e+02,1.0489e+02,0.0000e+00,4.5000e+02,1.3966e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,18:0,0,18,18 chr1 159824968 . T . PASS END=159824981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:33,0 chr1 159824982 . T . PASS END=159824982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1068:0,52,255:31,0 chr1 159824983 . C . PASS END=159824986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 159824987 . G . PASS END=159824987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr1 159824988 . G . PASS END=159825004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1202:0,83,255:32,0 chr1 159825005 . G . PASS END=159825013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 159825014 . G . PASS END=159825023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,80,255:26,0 chr1 159825024 . C . PASS END=159825024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 159825025 . C . PASS END=159825025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 159825026 . A . PASS END=159825027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:25,0 chr1 159825673 . C . PASS END=159825677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 159825678 . C . PASS END=159825678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 159825679 . T . PASS END=159825693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 159825694 . C . PASS END=159825701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 159825702 . C . PASS END=159825706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 159825707 . C . PASS END=159825707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 159825708 . G . PASS END=159825714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 159825715 . C . PASS END=159825718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 159825719 . C . PASS END=159825719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 159825720 . G . PASS END=159825783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,551:0,41,255:19,0 chr1 159825784 . A . PASS END=159825786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 159825787 . A . PASS END=159825787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159825788 . G . PASS END=159825807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 159825808 . A . PASS END=159825808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 159825809 . G . PASS END=159825815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:24,0 chr1 159825816 . C . PASS END=159825816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 159825817 . A . PASS END=159825850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,754:0,63,255:25,0 chr1 159825851 . T . PASS END=159825864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,682:0,44,255:19,0 chr1 159825865 . C . PASS END=159825865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 159825866 . G . PASS END=159825871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 159826314 . C . PASS END=159826433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:42:0,87,1460:0,87,255:40,0 chr1 159827535 . C . PASS END=159827535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 159827536 . T . PASS END=159827536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 159827537 . T . PASS END=159827560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,497:0,45,255:19,0 chr1 159827561 . T . PASS END=159827563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:19,0 chr1 159827564 . T . PASS END=159827573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159827574 . G . PASS END=159827589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,770:0,63,255:26,0 chr1 159827590 . G . PASS END=159827595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 159827596 . G . PASS END=159827596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 159827597 . G . PASS END=159827711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,87,255:40,0 chr1 159827712 . A . PASS END=159827712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:32,0 chr1 159827713 . T . PASS END=159827724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:34,0 chr1 159827725 . C . PASS END=159827741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:28:0,63,945:0,69,255:29,0 chr1 159827742 . G . PASS END=159827745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,855:0,45,255:20,0 chr1 159827746 . T . PASS END=159827748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 159827749 . A . PASS END=159827753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 159827754 . G . PASS END=159827754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159827755 . T . PASS END=159827755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 159827756 . G . PASS END=159827756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159827880 . C . PASS END=159828070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:85:34:0,85,1319:0,85,255:40,0 chr1 159828071 . T . PASS END=159828081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,900:0,83,255:24,0 chr1 159828524 . C . PASS END=159828528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 159828529 . T . PASS END=159828531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 159828532 . C . PASS END=159828549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:17,0 chr1 159828550 . C . PASS END=159828550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 159828551 . T . PASS END=159828559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr1 159828560 . C . PASS END=159828564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159828565 . T . PASS END=159828565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 159828566 . C . PASS END=159828575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 159828576 . T . PASS END=159828594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:23,0 chr1 159828595 . A . PASS END=159828595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 159828596 . G . PASS END=159828600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 159828601 . C . PASS END=159828601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 159828602 . A . PASS END=159828612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr1 159828613 . C T, 49.79 PASS DP=26;MQ=250.00;MQRankSum=4.295;ReadPosRankSum=3.729;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:5,6,0:9,6,0:48:85,0,50,429,443,872:255,0,255:13,0:4.9788e+01,6.7304e-05,5.3000e+01,4.2914e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,4,8:8,6,4,8 chr1 159828614 . G . PASS END=159828650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 159828651 . A . PASS END=159828654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 159828655 . A . PASS END=159828658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 159828659 . G . PASS END=159828659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 159828660 . A . PASS END=159828660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 159828661 . C . PASS END=159828662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 159828663 . T . PASS END=159828664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 159828665 . C . PASS END=159828665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 159828666 . T . PASS END=159828691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,50,255:19,0 chr1 159828692 . A . PASS END=159828698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:16:0,30,450:0,48,255:13,0 chr1 159828699 . A . PASS END=159828702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:21:16:0,21,315:0,48,255:7,0 chr1 159832263 . C . PASS END=159832281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:95:32:0,95,1158:0,95,255:35,0 chr1 159832282 . T . PASS END=159832282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:32,0 chr1 159832283 . A . PASS END=159832298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1335:0,95,255:35,0 chr1 159832299 . C . PASS END=159832299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1160:0,66,255:33,0 chr1 159832300 . T . PASS END=159832305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr1 159832306 . T . PASS END=159832306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1103:0,72,255:30,0 chr1 159832307 . C . PASS END=159832311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:34:0,84,1148:0,85,255:32,0 chr1 159842275 . T . PASS END=159842282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1199:0,86,255:36,0 chr1 159842283 . C . PASS END=159842283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:35,0 chr1 159842284 . A . PASS END=159842316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:36:0,95,1313:0,95,255:39,0 chr1 159842317 . A . PASS END=159842317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:34,0 chr1 159842318 . G . PASS END=159842353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1173:0,81,255:35,0 chr1 159842734 . C . PASS END=159842743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 159842744 . C . PASS END=159842771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,490:0,42,255:18,0 chr1 159842772 . G . PASS END=159842772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 159842773 . C . PASS END=159842802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,645:0,54,255:19,0 chr1 159842803 . A . PASS END=159842813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr1 159842814 . C . PASS END=159842836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,676:0,43,255:19,0 chr1 159842837 . T . PASS END=159842837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 159842838 . C . PASS END=159842839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159842840 . G . PASS END=159842844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 159842845 . T . PASS END=159842859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,709:0,66,255:24,0 chr1 159842860 . T . PASS END=159842860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 159842861 . C . PASS END=159842869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 159842870 . G . PASS END=159842872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 159842873 . G . PASS END=159842876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 159842877 . G . PASS END=159842877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 159842878 . A . PASS END=159842935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,840:0,62,255:26,0 chr1 159842936 . T . PASS END=159842936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:22,0 chr1 159842937 . C . PASS END=159842941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:22,0 chr1 159842942 . T . PASS END=159842942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 159842943 . C . PASS END=159842943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 159842944 . T . PASS END=159842944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 159842945 . G . PASS END=159842946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 159842947 . T . PASS END=159842947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 159842948 . C . PASS END=159842954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 159842955 . A . PASS END=159842958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,836:0,53,255:19,0 chr1 159846346 . C . PASS END=159846355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1036:0,82,255:31,0 chr1 159846356 . T . PASS END=159846356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:28,0 chr1 159846357 . C . PASS END=159846361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1180:0,83,255:30,0 chr1 159846362 . A . PASS END=159846362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,845:0,62,255:29,0 chr1 159846363 . C . PASS END=159846366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 159846367 . T . PASS END=159846367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:31,0 chr1 159846368 . C . PASS END=159846579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:32:0,89,1193:0,89,255:40,0 chr1 159847139 . C . PASS END=159847252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:28:0,83,995:0,83,255:40,0 chr1 159850344 . C . PASS END=159850344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 159850345 . A . PASS END=159850346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 159850347 . C . PASS END=159850353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159850354 . T . PASS END=159850354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:26,0 chr1 159850355 . T . PASS END=159850360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 159850361 . A . PASS END=159850361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,880:0,73,255:28,0 chr1 159850362 . C . PASS END=159850366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:34,0 chr1 159850367 . T . PASS END=159850367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:34,0 chr1 159850368 . C . PASS END=159850490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1249:0,89,255:40,0 chr1 159854226 . C . PASS END=159854240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1058:0,90,255:31,0 chr1 159854241 . T . PASS END=159854241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:29,0 chr1 159854242 . T . PASS END=159854354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:32:0,90,1289:0,90,255:40,0 chr1 159854355 . T . PASS END=159854355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 159856301 . C . PASS END=159856311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,893:0,64,255:26,0 chr1 159856312 . C . PASS END=159856312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,782:0,31,255:24,0 chr1 159856313 . T . PASS END=159856313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 159856314 . C . PASS END=159856314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 159856315 . C . PASS END=159856315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 159856316 . C . PASS END=159856318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:30:0,65,980:0,65,255:31,0 chr1 159856319 . C . PASS END=159856452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:81:32:0,81,1113:0,81,255:40,0 chr1 159856453 . G . PASS END=159856453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 159856454 . G . PASS END=159856465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,89,255:33,0 chr1 159856466 . G . PASS END=159856479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:26,0 chr1 159857631 . C . PASS END=159857633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 159857634 . G . PASS END=159857636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 159857637 . C . PASS END=159857637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 159857638 . A . PASS END=159857797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1000:0,81,255:40,0 chr1 159857798 . C . PASS END=159857799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:41:0,78,1170:0,123,255:26,0 chr1 159857800 . T . PASS END=159857801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:42:0,84,1260:0,126,255:28,0 chr1 159858142 . C . PASS END=159858151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:19,0 chr1 159858152 . T . PASS END=159858164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 159858165 . T . PASS END=159858165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 159858166 . G . PASS END=159858175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,870:0,62,255:25,0 chr1 159858176 . T . PASS END=159858176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 159858177 . C . PASS END=159858177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:24,0 chr1 159858178 . C . PASS END=159858179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr1 159858180 . T . PASS END=159858180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 159858181 . G . PASS END=159858183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 159858184 . C . PASS END=159858193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,920:0,81,255:28,0 chr1 159858194 . T . PASS END=159858194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 159858195 . C . PASS END=159858195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159858196 . T . PASS END=159858198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 159858199 . G . PASS END=159858245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:33,0 chr1 159858246 . T . PASS END=159858246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 159858247 . G . PASS END=159858252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 159858253 . T . PASS END=159858266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1039:0,71,255:26,0 chr1 159858267 . A . PASS END=159858267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 159858268 . G . PASS END=159858278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 159858279 . T . PASS END=159858279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 159858280 . G . PASS END=159858286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 159860270 . A . PASS END=159860270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 159860271 . T . PASS END=159860374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1086:0,95,255:40,0 chr1 159860375 . A . PASS END=159860385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:31:0,72,1080:0,93,255:26,0 chr1 159860386 . G . PASS END=159860386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:24,0 chr1 159860387 . C . PASS END=159860401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,842:0,64,255:25,0 chr1 159860402 . T . PASS END=159860412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,55,255:19,0 chr1 159862970 . C . PASS END=159862989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1026:0,84,255:32,0 chr1 159862990 . T . PASS END=159862990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:31,0 chr1 159862991 . C . PASS END=159862991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr1 159862992 . T . PASS END=159862992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1041:0,66,255:31,0 chr1 159862993 . C . PASS END=159863095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1139:0,80,255:40,0 chr1 159869886 . C . PASS END=159869888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,49,255:19,0 chr1 159888590 . T . PASS END=159888602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,613:0,51,255:19,0 chr1 159888603 . C . PASS END=159888610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:25,0 chr1 159888611 . C . PASS END=159888731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1125:0,84,255:39,0 chr1 159889064 . T . PASS END=159889095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:61:21:0,61,717:0,61,255:26,0 chr1 159889096 . C . PASS END=159889097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 159889098 . C . PASS END=159889111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 159889112 . A . PASS END=159889114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159889115 . G . PASS END=159889117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 159889118 . A . PASS END=159889119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159889120 . C . PASS END=159889139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,969:0,65,255:26,0 chr1 159889140 . T . PASS END=159889162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:17:0,45,675:0,51,255:19,0 chr1 159889163 . T . PASS END=159889163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 159889164 . T . PASS END=159889164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 159889165 . T . PASS END=159889165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,491:0,20,255:15,0 chr1 159889166 . C . PASS END=159889166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 159889451 . C . PASS END=159889451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 159889452 . T . PASS END=159889452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 159889453 . T . PASS END=159889454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 159889455 . C . PASS END=159889457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 159889458 . G . PASS END=159889470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,590:0,45,255:16,0 chr1 159889471 . T . PASS END=159889471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 159889472 . G . PASS END=159889500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 159889501 . C . PASS END=159889501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 159889502 . G . PASS END=159889524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr1 159889525 . G . PASS END=159889534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 159889535 . C . PASS END=159889535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 159889536 . C . PASS END=159889542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 159889543 . T . PASS END=159889543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 159889544 . T . PASS END=159889550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 159889551 . C . PASS END=159889555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,405:0,22,255:9,0 chr1 159889556 . T . PASS END=159889557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 159889558 . G . PASS END=159889562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 159889563 . C . PASS END=159889565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 159889566 . G . PASS END=159889568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 159889569 . C . PASS END=159889587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 159889588 . C . PASS END=159889594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 159889595 . G . PASS END=159889595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 159889596 . G . PASS END=159889614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:8,0 chr1 159889615 . T . PASS END=159889615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 159889616 . C . PASS END=159889625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,250:8,0 chr1 159890120 . C . PASS END=159890151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,255:0,21,255:9,0 chr1 159890152 . C . PASS END=159890159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 159890160 . G . PASS END=159890167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 159890168 . C . PASS END=159890170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 159890171 . G . PASS END=159890171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 159890172 . C . PASS END=159890187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,504:0,39,255:13,0 chr1 159890188 . A . PASS END=159890299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 159890300 . T . PASS END=159890320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:12,0 chr1 159890321 . C . PASS END=159890324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 159890325 . G . PASS END=159890327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 159893226 . C . PASS END=159893226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 159893227 . T . PASS END=159893227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 159893228 . C . PASS END=159893260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,842:0,61,255:25,0 chr1 159897135 . T . PASS END=159897151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 159897152 . G . PASS END=159897163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 159897164 . G . PASS END=159897193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:18,0 chr1 159897194 . C . PASS END=159897225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,738:0,63,255:24,0 chr1 159897226 . A . PASS END=159897227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 159897228 . G . PASS END=159897231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 159897232 . T . PASS END=159897232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 159897233 . C . PASS END=159897274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,886:0,72,255:26,0 chr1 159897275 . G . PASS END=159897277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159897278 . C . PASS END=159897301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:25,0 chr1 159897302 . C . PASS END=159897302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 159897303 . T . PASS END=159897308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 159897309 . C . PASS END=159897316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr1 159897550 . C . PASS END=159897564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:18,0 chr1 159897565 . C . PASS END=159897571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 159897572 . T . PASS END=159897574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 159897575 . G . PASS END=159897606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:24,0 chr1 159897607 . T . PASS END=159897607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr1 159897608 . C . PASS END=159897621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:25,0 chr1 159897622 . T . PASS END=159897622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 159897623 . G . PASS END=159897632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,945:0,75,255:25,0 chr1 159897633 . A . PASS END=159897633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 159897634 . A . PASS END=159897654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,53,255:19,0 chr1 159897655 . T . PASS END=159897661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:20:0,30,450:0,52,255:13,0 chr1 159897662 . C . PASS END=159897665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:21:20:0,21,315:0,44,255:9,0 chr1 159897666 . G . PASS END=159897667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:18:20:0,18,270:0,43,255:6,0 chr1 159897668 . T . LowGQ END=159897677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:17,0:17:0:15:0,0,0:0,28,255:3,0 chr1 159897948 . C . PASS END=159897956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 159897957 . A . PASS END=159897957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 159897958 . C . PASS END=159897990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr1 159897991 . C . PASS END=159897997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 159897998 . A . PASS END=159897998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 159897999 . C . PASS END=159898009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 159898010 . G . PASS END=159898038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 159898039 . A . PASS END=159898039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 159898040 . G . PASS END=159898062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:19,0 chr1 159898063 . T . PASS END=159898083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:19,0 chr1 159898084 . A . PASS END=159898099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:13:0,36,488:0,39,255:13,0 chr1 159898100 . A G, 50.00 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=3.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,7,0:0.538,0.000:13:4,2,0:2,5,0:48:85,0,50,250,215,465:232,0,171:6,0:5.0000e+01,6.6010e-05,5.2831e+01,2.5032e+02,2.4932e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,1,6:2,4,4,3 chr1 159898101 . C . PASS END=159898123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 159898124 . T . PASS END=159898135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 159898136 . A . PASS END=159898137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 159898138 . G . PASS END=159898143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 159898144 . G . PASS END=159898150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 159898151 . C . PASS END=159898161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 159898162 . C . PASS END=159898170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 159898171 . T . PASS END=159898177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 159898178 . A . PASS END=159898242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:9,0 chr1 159898243 . C . PASS END=159898294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,325:0,30,255:13,0 chr1 159898295 . A . PASS END=159898301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 159898302 . C . PASS END=159898312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 159898313 . G . PASS END=159898317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:15,0 chr1 159898318 . C . PASS END=159898336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 159898337 . G . PASS END=159898339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 159898340 . C . PASS END=159898385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr1 159898386 . A . PASS END=159898394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:23:11:0,23,360:0,23,255:10,0 chr1 159898395 . C . PASS END=159898399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 159898400 . G . PASS END=159898409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 159898410 . A . PASS END=159898410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 159898411 . G . PASS END=159898411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 159898412 . G . PASS END=159898413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 159898414 . G . PASS END=159898415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 159898416 . C . PASS END=159898423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 159898424 . T . PASS END=159898424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 159898425 . G . PASS END=159898430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 159898431 . G . PASS END=159898432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 159898433 . A . PASS END=159898439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 159898440 . G . PASS END=159898443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 159898444 . C . PASS END=159898472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,451:0,39,255:13,0 chr1 159898473 . T . PASS END=159898473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 159898474 . C . PASS END=159898486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 159898487 . G . PASS END=159898487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 159898488 . G . PASS END=159898526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,458:0,42,255:17,0 chr1 159898527 . A . PASS END=159898527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,541:0,34,255:16,0 chr1 159898528 . A . PASS END=159898529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr1 159898530 . G . PASS END=159898530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 159898531 . A . PASS END=159898543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 159898544 . C . PASS END=159898544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 159898545 . T . PASS END=159898616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:18,0 chr1 159898617 . A . PASS END=159898617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 159898618 . C . PASS END=159898622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,50,255:16,0 chr1 159898623 . C . PASS END=159898626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 159898627 . C . PASS END=159898628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 159898629 . T . PASS END=159898629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,521:0,37,255:13,0 chr1 159898630 . C . PASS END=159898636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 159898637 . C . PASS END=159898643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 159898644 . A . PASS END=159898644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:10,0 chr1 159898645 . T . PASS END=159898671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 159898672 . T . PASS END=159898678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 159898679 . A . PASS END=159898679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 159898680 . G . PASS END=159898706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,27,255:9,0 chr1 159898707 . G . LowGQ END=159898707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:4,0,255:6,0 chr1 159898708 . C . PASS END=159898726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 159898727 . A . PASS END=159898754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 159898755 . C . PASS END=159898755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 159898756 . C . PASS END=159898758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 159898759 . G . PASS END=159898759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 159898760 . G . PASS END=159898763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 159898764 . T . PASS END=159898764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 159898765 . T . PASS END=159898776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 159898777 . C . PASS END=159898790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,537:0,41,255:18,0 chr1 159898791 . C . PASS END=159898797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159898798 . C . PASS END=159898800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 159898801 . G . PASS END=159898802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159898803 . G . PASS END=159898803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 159898804 . C . PASS END=159898806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159898807 . A . PASS END=159898808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 159898871 . T . PASS END=159898875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 159898876 . C . PASS END=159898879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 159898880 . G . PASS END=159898880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 159898881 . A . PASS END=159898882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 159898883 . A . PASS END=159898883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 159898884 . G . PASS END=159898893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:29,0 chr1 159898894 . A . PASS END=159898894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 159898895 . C . PASS END=159898895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 159898896 . A . PASS END=159898898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 159898899 . A . PASS END=159898902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 159898903 . C . PASS END=159898904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 159898905 . G . PASS END=159898905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 159898906 . A . PASS END=159898906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 159898907 . G . PASS END=159898907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 159899141 . G . PASS END=159899183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:52:0,120,1800:0,129,255:40,0 chr1 159899428 . C . PASS END=159899449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:18,0 chr1 159899450 . G . PASS END=159899464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:22:0,62,831:0,62,255:26,0 chr1 159899465 . G . PASS END=159899468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 159899469 . C . PASS END=159899469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 159899470 . G . PASS END=159899491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1149:0,87,255:34,0 chr1 159899492 . G . PASS END=159899492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 159899493 . A . PASS END=159899534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1219:0,99,255:36,0 chr1 159899535 . A . PASS END=159899535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:29,0 chr1 159899536 . C . PASS END=159899551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1194:0,83,255:31,0 chr1 159899552 . G . PASS END=159899567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,937:0,62,255:25,0 chr1 159899568 . C . PASS END=159899568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 159899569 . C . PASS END=159899573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 159899574 . A . PASS END=159899574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 159899575 . G . PASS END=159899577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 159899578 . G . PASS END=159899578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:22,0 chr1 159899579 . C . PASS END=159899584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 159899585 . C . PASS END=159899604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,54,255:19,0 chr1 159899681 . C . PASS END=159899681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 159899682 . G . PASS END=159899683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 159899684 . A . PASS END=159899684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 159899685 . A . PASS END=159899685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr1 159899686 . G . PASS END=159899686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 159899687 . T . PASS END=159899687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,733:0,38,255:21,0 chr1 159899688 . G . PASS END=159899688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 159899689 . G . PASS END=159899689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 159899690 . A . PASS END=159899696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 159899697 . G . PASS END=159899697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 159899698 . G . PASS END=159899699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,823:0,69,255:23,0 chr1 159899700 . C . PASS END=159899700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 159899701 . G . PASS END=159899701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 159899702 . T . PASS END=159899702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 159899703 . G . PASS END=159899733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,861:0,66,255:23,0 chr1 159899734 . A . PASS END=159899750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 159899751 . C . PASS END=159899765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 159899979 . C . PASS END=159899979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 159899980 . T . PASS END=159899992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:16,0 chr1 159899993 . G . PASS END=159899993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 159899994 . C . PASS END=159899994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 159899995 . A . PASS END=159899995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 159899996 . C . PASS END=159899997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 159899998 . A . PASS END=159899998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 159899999 . G . PASS END=159899999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 159900000 . C . PASS END=159900000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 159900001 . A . PASS END=159900021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,574:0,40,255:19,0 chr1 159900022 . A . PASS END=159900022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,602:0,24,255:17,0 chr1 159900023 . C . PASS END=159900023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 159900024 . A . PASS END=159900024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,576:0,18,255:18,0 chr1 159900025 . G . PASS END=159900025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 159900026 . C . PASS END=159900026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,621:0,26,255:18,0 chr1 159900027 . C . PASS END=159900029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 159900030 . G . PASS END=159900032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 159900033 . C . PASS END=159900033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 159900034 . A . PASS END=159900038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 159900039 . C . PASS END=159900039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 159900040 . T . PASS END=159900069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:25,0 chr1 159900070 . A . PASS END=159900070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 159900071 . A . PASS END=159900071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,758:0,39,255:22,0 chr1 159900072 . G . PASS END=159900072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 159900073 . A . PASS END=159900073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:23,0 chr1 159900074 . C . PASS END=159900076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 159900077 . A . PASS END=159900077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 159900078 . G . PASS END=159900090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,795:0,69,255:24,0 chr1 159900091 . T . PASS END=159900091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:22,0 chr1 159900092 . T . PASS END=159900098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 159900099 . C . PASS END=159900104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr1 159900105 . T . PASS END=159900105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:16,0 chr1 159900106 . G . PASS END=159900111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:19:0,52,721:0,52,255:19,0 chr1 159900112 . T . PASS END=159900115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 159900116 . A . PASS END=159900147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:17,0 chr1 159900148 . G . PASS END=159900149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 159900150 . C . PASS END=159900150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:12,0 chr1 159900151 . A . PASS END=159900152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 159900153 . C . PASS END=159900153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 159900154 . A . PASS END=159900160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:11,0 chr1 159900161 . G . PASS END=159900167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 159900168 . G . PASS END=159900183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 159900184 . A . PASS END=159900187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,394:0,20,255:9,0 chr1 159900188 . C . PASS END=159900229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:13,0 chr1 159900482 . C . PASS END=159900482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 159900483 . T . PASS END=159900501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:29,0 chr1 159900502 . A . PASS END=159900502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 159900503 . T . PASS END=159900562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1149:0,93,255:39,0 chr1 159900563 . T . PASS END=159900567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:67:35:0,67,1255:0,67,255:30,0 chr1 159900568 . G . PASS END=159900577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 159900578 . C . PASS END=159900590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr1 159900591 . G . PASS END=159900618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr1 159900619 . G . PASS END=159900619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 159900620 . A . PASS END=159900624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 159900625 . C . PASS END=159900652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 159900653 . T . PASS END=159900657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 159900928 . A . PASS END=159900930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 159900931 . G . PASS END=159900932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 159900933 . G . PASS END=159900933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 159900934 . G . PASS END=159900990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1180:0,85,255:35,0 chr1 159900991 . A . PASS END=159900991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:29,0 chr1 159900992 . C . PASS END=159900992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 159900993 . A . PASS END=159900993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 159900994 . T . PASS END=159901026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1218:0,81,255:36,0 chr1 159901027 . T . PASS END=159901027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1132:0,75,255:33,0 chr1 159901028 . T . PASS END=159901049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:85:34:0,85,1188:0,85,255:35,0 chr1 159901050 . G . PASS END=159901050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:28,0 chr1 159901051 . C . PASS END=159901051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 159901243 . C . PASS END=159901258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:13:0,32,504:0,32,255:13,0 chr1 159901259 . C . PASS END=159901282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:16,0 chr1 159901283 . A . PASS END=159901283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 159901284 . G . PASS END=159901290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr1 159901291 . T . PASS END=159901291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 159901292 . G . PASS END=159901292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 159901293 . G . PASS END=159901293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 159901294 . C . PASS END=159901296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 159901297 . T . PASS END=159901298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 159901299 . C . PASS END=159901337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,690:0,51,255:19,0 chr1 159901338 . A . PASS END=159901338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 159901339 . G . PASS END=159901357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 159901358 . G . PASS END=159901359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 159901360 . C . PASS END=159901379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 159901380 . A . PASS END=159901393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 159901602 . C . PASS END=159901612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:21,0 chr1 159901613 . A . PASS END=159901613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,601:0,46,255:20,0 chr1 159901614 . G . PASS END=159901622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,671:0,63,255:23,0 chr1 159901623 . A . PASS END=159901623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 159901624 . G . PASS END=159901649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,872:0,69,255:25,0 chr1 159901650 . G . PASS END=159901650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 159901651 . A . PASS END=159901693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 159901694 . G . PASS END=159901707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:17:0,43,668:0,43,255:19,0 chr1 159901708 . G . PASS END=159901708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 159901709 . C . PASS END=159901718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 159902302 . C . PASS END=159902305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 159902306 . A . PASS END=159902306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 159902307 . G . PASS END=159902321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:23,0 chr1 159902322 . C . PASS END=159902322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 159902323 . A . PASS END=159902337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,772:0,69,255:25,0 chr1 159902338 . G . PASS END=159902338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 159902339 . G . PASS END=159902339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159902340 . T . PASS END=159902340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 159902341 . A . PASS END=159902354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:32,0 chr1 159902355 . A . PASS END=159902355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:30,0 chr1 159902356 . G . PASS END=159902363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1164:0,96,255:34,0 chr1 159902364 . A . PASS END=159902364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 159902365 . G . PASS END=159902371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr1 159902372 . T . PASS END=159902372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1087:0,72,255:31,0 chr1 159902373 . C . PASS END=159902389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:34,0 chr1 159902390 . T . PASS END=159902391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 159902392 . C . PASS END=159902394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 159902395 . C . PASS END=159902396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 159902397 . G . PASS END=159902401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 159902402 . A . PASS END=159902402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 159902403 . T . PASS END=159902403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 159902404 . G . PASS END=159902431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,908:0,61,255:26,0 chr1 159902432 . C . PASS END=159902432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:22,0 chr1 159902433 . A . PASS END=159902442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 159903980 . C . PASS END=159903985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr1 159903986 . C . PASS END=159903986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 159903987 . A . PASS END=159903998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:23,0 chr1 159903999 . T . PASS END=159904000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,806:0,53,255:23,0 chr1 159904001 . T . PASS END=159904005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:26,0 chr1 159904006 . C . PASS END=159904010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 159904011 . G . PASS END=159904014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 159904015 . A . PASS END=159904016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159904017 . C . PASS END=159904024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 159904025 . G . PASS END=159904027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159904028 . C . PASS END=159904031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,976:0,68,255:27,0 chr1 159904032 . G . PASS END=159904036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 159904037 . G . PASS END=159904038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 159904039 . T . PASS END=159904043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 159904044 . C . PASS END=159904044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 159904045 . G . PASS END=159904046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 159904047 . A . PASS END=159904047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,828:0,70,255:27,0 chr1 159904048 . C . PASS END=159904067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 159904068 . G . PASS END=159904082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,976:0,67,255:26,0 chr1 159904083 . A . PASS END=159904083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 159904084 . G . PASS END=159904084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 159904085 . G . PASS END=159904085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 159904086 . G . PASS END=159904092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 159904093 . C . PASS END=159904093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 159904094 . A . PASS END=159904122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,945:0,64,255:25,0 chr1 159904215 . A . PASS END=159904293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1233:0,81,255:38,0 chr1 159904294 . A . PASS END=159904294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:29,0 chr1 159904295 . T . PASS END=159904300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:30,0 chr1 159904301 . T . PASS END=159904311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1069:0,71,255:25,0 chr1 159904312 . C . PASS END=159904312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 159904313 . A . PASS END=159904313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 159904314 . G . PASS END=159904325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr1 159904326 . C . PASS END=159904326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 159904327 . G . PASS END=159904342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1119:0,87,255:30,0 chr1 159904343 . A . PASS END=159904343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 159904344 . C . PASS END=159904347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 159904348 . G . PASS END=159904360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:21,0 chr1 159904471 . C . PASS END=159904471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159904472 . T . PASS END=159904483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 159904484 . C . PASS END=159904511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:22,0 chr1 159904512 . G . PASS END=159904512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 159904513 . G . PASS END=159904547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,876:0,69,255:26,0 chr1 159904548 . C . PASS END=159904563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 159904564 . G . PASS END=159904597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 159904598 . C . PASS END=159904612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,47,255:19,0 chr1 159906189 . C . PASS END=159906193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:39,0 chr1 159906194 . A . PASS END=159906282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,86,255:40,0 chr1 159906283 . G . PASS END=159906283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 159906284 . A . PASS END=159906287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 159906288 . G . PASS END=159906288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr1 159906289 . C . PASS END=159906289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 159906290 . A . PASS END=159906299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 159906300 . T . PASS END=159906300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:24,0 chr1 159906301 . C . PASS END=159906302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 159906303 . G . PASS END=159906306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 159906544 . T . PASS END=159906564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 159906565 . G . PASS END=159906568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,590:0,45,255:16,0 chr1 159906569 . A . PASS END=159906569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 159906570 . G . PASS END=159906572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 159906573 . C . PASS END=159906573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 159906574 . C . PASS END=159906595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 159906596 . A . PASS END=159906596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 159906597 . C . PASS END=159906629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:16,0 chr1 159906630 . G . PASS END=159906635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 159906636 . T . PASS END=159906636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:12,0 chr1 159906637 . C . PASS END=159906646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 159906647 . A . PASS END=159906649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 159906650 . T . PASS END=159906653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 159906654 . G . PASS END=159906663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 159906664 . C . PASS END=159906698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 159907476 . A . PASS END=159907484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,773:0,61,255:25,0 chr1 159907485 . T . PASS END=159907485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 159907486 . C . PASS END=159907489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 159907490 . T . PASS END=159907490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 159907491 . G . PASS END=159907491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 159907492 . C . PASS END=159907492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 159907493 . A . PASS END=159907493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 159907494 . C . PASS END=159907494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 159907495 . C . PASS END=159907495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:29,0 chr1 159907496 . C . PASS END=159907497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 159907498 . G . PASS END=159907498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:30,0 chr1 159907499 . G . PASS END=159907501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 159907502 . C . PASS END=159907503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 159907504 . G . PASS END=159907504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 159907505 . T . PASS END=159907505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 159907506 . T . PASS END=159907508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr1 159907509 . C . PASS END=159907510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 159907511 . A . PASS END=159907511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 159907512 . A . PASS END=159907512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:30,0 chr1 159907513 . A . PASS END=159907516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1060:0,93,255:31,0 chr1 159907517 . T . PASS END=159907517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1035:0,54,255:29,0 chr1 159907518 . C . PASS END=159907543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:32,0 chr1 159907544 . A . PASS END=159907544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:29,0 chr1 159907545 . A . PASS END=159907567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1117:0,80,255:32,0 chr1 159907568 . T . PASS END=159907573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1053:0,71,255:26,0 chr1 159907574 . T . PASS END=159907582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:27,0 chr1 159907583 . A . PASS END=159907599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,886:0,64,255:26,0 chr1 159907600 . A . PASS END=159907600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:21,0 chr1 159907601 . G . PASS END=159907601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159907602 . A . PASS END=159907605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,723:0,49,255:20,0 chr1 159907606 . C . PASS END=159907608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159907609 . C . PASS END=159907610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,723:0,49,255:20,0 chr1 159907611 . T . PASS END=159907615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159907616 . A . PASS END=159907628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,47,255:19,0 chr1 159912753 . C . PASS END=159912758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 159912759 . A . PASS END=159912759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 159912760 . A . PASS END=159912760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:19,0 chr1 159912761 . T . PASS END=159912761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 159912762 . C . PASS END=159912763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 159912764 . G . PASS END=159912768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,734:0,63,255:22,0 chr1 159912769 . A . PASS END=159912769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 159912770 . A . PASS END=159912776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,732:0,69,255:25,0 chr1 159912777 . G . PASS END=159912777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 159912778 . A . PASS END=159912781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:25:0,71,893:0,71,255:27,0 chr1 159912782 . T . PASS END=159912784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 159912785 . A . PASS END=159912785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 159912786 . G . PASS END=159912813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1175:0,83,255:36,0 chr1 159912814 . G . PASS END=159912814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1213:0,78,255:33,0 chr1 159912815 . A . PASS END=159912815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 159912816 . A . PASS END=159912816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1217:0,28,255:33,0 chr1 159912817 . T . PASS END=159912818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:35,0 chr1 159912819 . C . PASS END=159912821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:37:0,98,1349:0,98,255:36,0 chr1 159912822 . A . PASS END=159912822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1211:0,59,255:35,0 chr1 159912823 . G . PASS END=159912823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 159912824 . C . PASS END=159912824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 159912825 . G . PASS END=159912825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:35,0 chr1 159912826 . C . PASS END=159912826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:34,0 chr1 159912827 . A . PASS END=159912829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1227:0,81,255:35,0 chr1 159912830 . C . PASS END=159912830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1233:0,42,255:32,0 chr1 159912831 . A . PASS END=159912831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1303:0,75,255:32,0 chr1 159912832 . C . PASS END=159912834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:39:0,82,1329:0,82,255:34,0 chr1 159912835 . G . PASS END=159912835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1266:0,62,255:33,0 chr1 159912836 . A . PASS END=159912837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:81:40:0,81,1330:0,81,255:34,0 chr1 159912838 . G . PASS END=159912838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1282:0,62,255:33,0 chr1 159912839 . A . PASS END=159912839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 159912840 . C . PASS END=159912840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:35,0 chr1 159912841 . A . PASS END=159912841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 159912842 . T . PASS END=159912842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1197:0,56,255:34,0 chr1 159912843 . G . PASS END=159912843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 159912844 . C . PASS END=159912844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1221:0,72,255:35,0 chr1 159912845 . A . PASS END=159912845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:16:37:0,16,1030:0,16,255:34,1 chr1 159912846 . G . PASS END=159912847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:37:0,76,1353:0,76,255:38,1 chr1 159912848 . G . PASS END=159912848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1398:0,114,255:38,0 chr1 159912849 . G . PASS END=159912858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:38:0,62,1288:0,62,255:38,0 chr1 159912859 . G . PASS END=159912862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1374:0,81,255:40,0 chr1 159912863 . G . PASS END=159912864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:37,0 chr1 159912865 . G . PASS END=159912868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1368:0,81,255:38,0 chr1 159912869 . A . PASS END=159912869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1351:0,65,255:33,0 chr1 159912870 . G . PASS END=159912871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1398:0,81,255:34,0 chr1 159912872 . A . PASS END=159912872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1335:0,65,255:32,0 chr1 159912873 . G . PASS END=159912877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1350:0,84,255:35,0 chr1 159912878 . C . PASS END=159912878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:30,0 chr1 159912879 . A . PASS END=159912891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,102,255:34,0 chr1 159912892 . A . PASS END=159912919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 159912920 . A . PASS END=159912920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:19,0 chr1 159912921 . C . PASS END=159912921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159912922 . C . PASS END=159912922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:18,0 chr1 159912923 . A . PASS END=159912923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:17,0 chr1 159912924 . C . PASS END=159912941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:17,0 chr1 159913187 . C . PASS END=159913199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 159913200 . G . PASS END=159913209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 159913210 . A . PASS END=159913210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 159913211 . G . PASS END=159913214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 159913215 . G . PASS END=159913215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 159913216 . A . PASS END=159913233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 159913234 . C . PASS END=159913234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr1 159913235 . A . PASS END=159913244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 159921451 . T . PASS END=159921459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:19,0 chr1 159921460 . G . PASS END=159921460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 159921461 . C . PASS END=159921477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 159921478 . C . PASS END=159921479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 159921480 . C . PASS END=159921483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159921484 . C . PASS END=159921484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159921485 . C . PASS END=159921488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 159921489 . A . PASS END=159921509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,856:0,61,255:26,0 chr1 159921510 . G . PASS END=159921510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 159921511 . T . PASS END=159921511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 159921512 . T . PASS END=159921512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 159921513 . T . PASS END=159921513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,878:0,54,255:27,0 chr1 159921514 . C . PASS END=159921515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 159921516 . T . PASS END=159921516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:27,0 chr1 159921517 . C . PASS END=159921518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 159921519 . T . PASS END=159921519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,911:0,56,255:27,0 chr1 159921520 . C . PASS END=159921520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,935:0,70,255:27,0 chr1 159921521 . C . PASS END=159921522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 159921523 . T . PASS END=159921523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 159921524 . G . PASS END=159921528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 159921529 . T . PASS END=159921529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,821:0,37,255:25,0 chr1 159921530 . T . PASS END=159921533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 159921534 . G . PASS END=159921534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 159921535 . T . PASS END=159921538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 159921539 . T . PASS END=159921539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 159921540 . T . PASS END=159921541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 159921542 . T . PASS END=159921542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:29,0 chr1 159921543 . G . PASS END=159921546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 159921547 . T . PASS END=159921547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 159921548 . C . PASS END=159921574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:31,0 chr1 159921575 . A . PASS END=159921575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 159921576 . T . PASS END=159921576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:28,0 chr1 159921577 . T . PASS END=159921578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 159921579 . C . PASS END=159921579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:28,0 chr1 159921580 . C . PASS END=159921582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 159921583 . G . PASS END=159921583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 159921584 . A . PASS END=159921586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 159921587 . A . PASS END=159921587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 159921588 . A . PASS END=159921589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 159921590 . A . PASS END=159921590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 159921591 . A . PASS END=159921592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 159921593 . A . PASS END=159921629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:22:0,61,784:0,61,255:26,0 chr1 159921630 . A . PASS END=159921630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 159921631 . A . PASS END=159921632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 159921633 . G . PASS END=159921633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 159921634 . C . PASS END=159921635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159921636 . T . PASS END=159921636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,570:0,18,255:18,0 chr1 159921637 . C . PASS END=159921638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159921639 . C . PASS END=159921646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,720:0,47,255:19,0 chr1 159921647 . T . PASS END=159921656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:31:16:0,31,520:0,31,255:13,0 chr1 159922052 . C . PASS END=159922053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 159922054 . G . PASS END=159922086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:19,0 chr1 159922087 . C . PASS END=159922094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 159922095 . G . PASS END=159922095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 159922096 . C . PASS END=159922114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 159922115 . T . PASS END=159922115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159922116 . G . PASS END=159922116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 159922117 . C . PASS END=159922119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 159922120 . G . PASS END=159922160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,847:0,69,255:24,0 chr1 159922161 . G . PASS END=159922167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 159922168 . G . PASS END=159922170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 159922171 . C . PASS END=159922171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 159922172 . C . PASS END=159922176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 159922177 . T . PASS END=159922177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 159922178 . G . PASS END=159922180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159922181 . A . PASS END=159922181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 159922182 . T . PASS END=159922193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 159922194 . A . PASS END=159922212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr1 159922213 . C . PASS END=159922215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 159922216 . T . PASS END=159922227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,765:0,50,255:19,0 chr1 159922228 . A . PASS END=159922228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:18,0 chr1 159922229 . T . PASS END=159922229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 159922230 . G . PASS END=159922235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 159922236 . C . PASS END=159922240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 159922241 . C . PASS END=159922242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159922243 . A . PASS END=159922246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 159922247 . A . PASS END=159922248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 159922249 . C . PASS END=159922255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 159922256 . G . PASS END=159922260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 159922261 . A . PASS END=159922283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 159922284 . A . PASS END=159922284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 159922285 . C . PASS END=159922319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,515:0,45,255:17,0 chr1 159922320 . C . PASS END=159922324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 159923099 . G . PASS END=159923110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:25,0 chr1 159923111 . T G, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,932,75,932:255,75,0:0,0:1.2178e+02,7.1776e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,6:0,0,14,11 chr1 159923112 . A . PASS END=159923127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 159923128 . G . PASS END=159923148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1113:0,87,255:32,0 chr1 159923149 . A . PASS END=159923169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1166:0,96,255:32,0 chr1 159923170 . A . PASS END=159923170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:30,0 chr1 159923171 . G . PASS END=159923415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1260:0,92,255:40,0 chr1 159923416 . C . PASS END=159923416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:27,0 chr1 159923417 . A . PASS END=159923420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,99,255:29,0 chr1 159923421 . T . PASS END=159923421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,963:0,79,255:27,0 chr1 159923422 . C . PASS END=159923443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1133:0,90,255:32,0 chr1 159923882 . C . PASS END=159923884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:67:24:0,67,878:0,67,255:27,0 chr1 159923885 . C . PASS END=159923894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1057:0,84,255:30,0 chr1 159923895 . C . PASS END=159923895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 159923896 . A . PASS END=159923906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 159923907 . C . PASS END=159923913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 159923914 . G . PASS END=159923918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 159923919 . G . PASS END=159923919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 159923920 . G . PASS END=159923927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 159943588 . C . PASS END=159943717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:33:0,88,1203:0,88,255:40,0 chr1 159952932 . C . PASS END=159952937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,114,1800:0,114,255:40,0 chr1 159969210 . T . PASS END=159969284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,153,255:40,0 chr1 160000258 . C . PASS END=160001048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:32:0,82,1121:0,82,255:40,0 chr1 160001049 . T . PASS END=160001049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 160001050 . C . PASS END=160001352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:30:0,84,1048:0,84,255:40,0 chr1 160001353 . C . PASS END=160001353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 160001354 . G . PASS END=160001361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1141:0,90,255:30,0 chr1 160001362 . G . PASS END=160001362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 160001363 . G . PASS END=160001406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:32:0,93,1202:0,95,255:37,0 chr1 160001407 . C . PASS END=160001407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:35,0 chr1 160001408 . C . PASS END=160001480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1180:0,83,255:38,0 chr1 160001481 . C . PASS END=160001481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 160001482 . C . PASS END=160001486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1141:0,82,255:28,0 chr1 160001487 . T . PASS END=160001487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:27,0 chr1 160001488 . C . PASS END=160001497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 160001498 . A . PASS END=160001498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 160001499 . G . PASS END=160001503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 160001504 . T . PASS END=160001529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,848:0,61,255:26,0 chr1 160001799 . G . PASS END=160001799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 160007264 . C . PASS END=160007264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 160007330 . C . PASS END=160007330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 160007343 . A . PASS END=160007343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:64:0,120,1800:0,159,255:40,0 chr1 160007413 . G . PASS END=160007413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 160007446 . T . PASS END=160007446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160007566 . T . PASS END=160007566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1123:0,80,255:29,0 chr1 160007677 . G . PASS END=160007677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 160007725 . C . PASS END=160007725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 160008003 . C . PASS END=160008003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1271:0,99,255:33,0 chr1 160008013 . C . PASS END=160008013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr1 160008025 . G . PASS END=160008025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 160008053 . G . PASS END=160008053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 160008079 . A . PASS END=160008079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr1 160008109 . G . PASS END=160008109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 160008160 . A . PASS END=160008160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 160008212 . C . PASS END=160008212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 160008287 . A . PASS END=160008287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 160008356 . G . PASS END=160008356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 160008429 . C . PASS END=160008429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 160008506 . A . PASS END=160008506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,114,1710:0,124,255:38,0 chr1 160008534 . C . PASS END=160008534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 160008559 . C . PASS END=160008559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 160008587 . T . PASS END=160008587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 160008629 . C . PASS END=160008629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 160008653 . C . PASS END=160008653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160008663 . G . PASS END=160008663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160008667 . G . PASS END=160008667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 160008693 . C . PASS END=160008693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160008704 . C . PASS END=160008704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 160008724 . A . PASS END=160008724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160008777 . A . PASS END=160008777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160008789 . A . PASS END=160008789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 160008810 . G . PASS END=160008810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160008941 . A . PASS END=160008941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 160009035 . T . PASS END=160009035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160009328 . A . PASS END=160009328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 160009344 . G . PASS END=160009344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,148,255:40,0 chr1 160009356 . A . PASS END=160009356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr1 160009374 . G . PASS END=160009374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 160009394 . C . PASS END=160009395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 160009530 . A . PASS END=160009530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 160009748 . G . PASS END=160009748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 160009925 . C . PASS END=160009925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 160010018 . C . PASS END=160010018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 160010022 . A . PASS END=160010022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 160010135 . T . PASS END=160010135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 160010192 . T . PASS END=160010192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 160010292 . C . PASS END=160010391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:98:45:0,98,1762:0,98,255:40,0 chr1 160010400 . T . PASS END=160010400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr1 160010449 . G . PASS END=160010449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 160010454 . C . PASS END=160010454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 160010503 . A . PASS END=160010503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 160010821 . T . PASS END=160010821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160010836 . G . PASS END=160010836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 160010917 . A . PASS END=160010917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 160010946 . T . PASS END=160010946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 160011012 . G . PASS END=160011012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160011110 . G . PASS END=160011110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 160011131 . C . PASS END=160011131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160011162 . T . PASS END=160011162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 160011183 . T . PASS END=160011202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,884:0,65,255:26,0 chr1 160011203 . C . PASS END=160011214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:31:0,89,1219:0,89,255:34,0 chr1 160011215 . T . PASS END=160011215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 160011216 . G . PASS END=160011510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:33:0,87,1282:0,89,255:40,1 chr1 160011511 . C . PASS END=160011511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:39,0 chr1 160011512 . G . PASS END=160011616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:37:0,91,1443:0,91,255:40,0 chr1 160011617 . C . PASS END=160011617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr1 160011618 . A . PASS END=160011640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:33:0,87,1305:0,99,255:35,0 chr1 160011641 . T . PASS END=160011641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:28,0 chr1 160011642 . C . PASS END=160011642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160011643 . T . PASS END=160011643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 160011644 . C . PASS END=160011646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 160011647 . C . PASS END=160011648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 160011649 . T . PASS END=160011651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 160011652 . T . PASS END=160011653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 160011654 . G . PASS END=160011661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 160011662 . G . PASS END=160011662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160011663 . G . PASS END=160011672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 160011673 . A . PASS END=160011673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 160011674 . G . PASS END=160011674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 160011675 . T . PASS END=160011675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:28,0 chr1 160011676 . T . PASS END=160011686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 160011687 . C . PASS END=160011714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,71,255:26,0 chr1 160011715 . A . PASS END=160011715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 160011716 . T . PASS END=160011716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:17,0 chr1 160011717 . A . PASS END=160011717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160011718 . T . PASS END=160011718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 160011719 . T . PASS END=160011727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:22,0 chr1 160011728 . G . PASS END=160011735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,798:0,50,255:19,0 chr1 160011736 . A . PASS END=160011738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,898:0,62,255:22,0 chr1 160011739 . C . PASS END=160011739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 160011740 . A . PASS END=160011745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,815:0,66,255:25,0 chr1 160011746 . T . PASS END=160011746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 160011747 . G . PASS END=160011747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 160011748 . C . PASS END=160011748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 160011749 . C . PASS END=160011757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 160011758 . A . PASS END=160011758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 160011759 . G . PASS END=160011765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 160011766 . A . PASS END=160011766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,969:0,29,255:25,0 chr1 160011767 . C . PASS END=160011769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 160011770 . C . PASS END=160011770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:26,0 chr1 160011771 . A . PASS END=160011782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 160011783 . A . PASS END=160011785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 160011786 . A . PASS END=160011787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160011788 . T . PASS END=160011789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160011790 . G . PASS END=160011798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 160011799 . C . PASS END=160011800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:30,0 chr1 160011801 . C . PASS END=160011827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1119:0,90,255:31,0 chr1 160011828 . G . PASS END=160011828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 160011829 . A . PASS END=160011840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:31:0,82,1149:0,82,255:31,0 chr1 160011841 . A . PASS END=160011845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1073:0,60,255:31,0 chr1 160011846 . G . PASS END=160011846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:31,0 chr1 160011847 . A . PASS END=160011847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr1 160011848 . T . PASS END=160011848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 160011849 . T . PASS END=160011849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:33,0 chr1 160011850 . T . PASS END=160011880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1197:0,84,255:35,0 chr1 160011881 . T . PASS END=160011881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1190:0,66,255:28,0 chr1 160011882 . A . PASS END=160011886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1221:0,89,255:31,0 chr1 160011887 . G . PASS END=160011887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1016:0,49,255:29,0 chr1 160011888 . C . PASS END=160011963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:33:0,80,1090:0,80,255:37,0 chr1 160011964 . A . PASS END=160011964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:33,0 chr1 160011965 . G . PASS END=160011967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 160011968 . A . PASS END=160011968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:32,0 chr1 160011969 . G . PASS END=160012143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1272:0,83,255:40,1 chr1 160012144 . A . PASS END=160012154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,79,255:25,0 chr1 160012155 . C . PASS END=160012157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 160012158 . C . PASS END=160012159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 160012160 . G . PASS END=160012165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:28,0 chr1 160012166 . T . PASS END=160012211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,925:0,62,255:26,0 chr1 160012212 . G . PASS END=160012212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 160012213 . C . PASS END=160012213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 160012214 . T . PASS END=160012220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 160012221 . A . PASS END=160012221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 160012222 . T . PASS END=160012222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160012223 . C . PASS END=160012223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 160012224 . T . PASS END=160012306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1211:0,84,255:38,0 chr1 160012307 . T . PASS END=160012322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 160039811 . C . PASS END=160039811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 160039979 . G . PASS END=160039979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 160039994 . G . PASS END=160039994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 160053650 . A . LowGQ END=160053656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,61:0,0,69:3,0 chr1 160053657 . G . PASS END=160053673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr1 160053674 . G . LowGQ END=160053674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 160053675 . A . PASS END=160053704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,149:5,0 chr1 160053705 . A . LowGQ END=160053708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:5:0,0,135:0,0,140:3,0 chr1 160053709 . C . PASS END=160053747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 160053748 . C . PASS END=160053754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,111:3,0 chr1 160053755 . G . PASS END=160053796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,164:6,0 chr1 160053797 . A . PASS END=160053797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 160053798 . G . PASS END=160053805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr1 160053806 . C . PASS END=160053838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr1 160053839 . G . PASS END=160053849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 160053850 . C . PASS END=160053852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 160053853 . G . LowGQ END=160053855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:5,0 chr1 160053856 . G . PASS END=160053856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 160053857 . G . LowGQ END=160053857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:5,0 chr1 160053858 . A . PASS END=160053860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:6,0 chr1 160053861 . A . LowGQ END=160053861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,139:34,0,173:5,0 chr1 160053862 . G . PASS END=160053864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 160053865 . G . PASS END=160053865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 160053866 . C . PASS END=160053866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 160053867 . C . LowGQ END=160053871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,153:0,0,165:6,0 chr1 160053872 . C . PASS END=160053872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,152:0,21,152:7,0 chr1 160053873 . G . LowGQ END=160053873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,131:12,0,143:5,0 chr1 160053874 . C . PASS END=160053875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 160053876 . G . PASS END=160053876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:6,0 chr1 160053877 . C . PASS END=160053878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,181:0,21,181:7,0 chr1 160053879 . G . LowGQ END=160053879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,161:12,0,173:5,0 chr1 160053880 . C . PASS END=160053881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,182:0,21,182:8,0 chr1 160053882 . G . LowGQ END=160053882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,155:9,0,164:6,0 chr1 160053883 . C . PASS END=160053884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 160053885 . A . LowGQ END=160053885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,147:9,0,156:6,0 chr1 160053886 . G . PASS END=160053886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 160053887 . C . PASS END=160053887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 160053888 . G . PASS END=160053888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 160053889 . C . PASS END=160053889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 160053890 . T . LowGQ END=160053890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,208:6,0,214:7,0 chr1 160053891 . A . PASS END=160053896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,260:0,27,255:9,0 chr1 160053897 . A . PASS END=160053899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,197:0,10,197:8,0 chr1 160053900 . A . PASS END=160053900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 160053901 . G . LowGQ END=160053901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,172:6,0,178:7,0 chr1 160053902 . G . PASS END=160053904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 160053905 . G . PASS END=160053906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr1 160053907 . C . LowGQ END=160053907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,258:9,0,255:9,0 chr1 160053908 . C . PASS END=160053908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 160053909 . G . PASS END=160053909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 160053910 . G . PASS END=160053910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 160053911 . T . PASS END=160053911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 160053912 . G . PASS END=160053912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 160053913 . C . PASS END=160053913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr1 160053914 . A . PASS END=160053914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 160053915 . A . PASS END=160053915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 160053916 . C . LowGQ END=160053917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,432:2,0,255:14,0 chr1 160053918 . T . PASS END=160053918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 160053919 . G . PASS END=160053920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 160053921 . A . PASS END=160053921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 160053922 . G . PASS END=160053922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 160053923 . C . PASS END=160053924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 160053925 . G . PASS END=160053928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:17,0 chr1 160053929 . A . PASS END=160053929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 160053930 . A . PASS END=160053930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 160053931 . C . PASS END=160053931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 160053932 . G . PASS END=160053940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 160053941 . A . PASS END=160053941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,535:0,24,255:14,0 chr1 160053942 . C . PASS END=160053942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 160053943 . A . PASS END=160053943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 160053944 . T . PASS END=160053973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:18,0 chr1 160053974 . C . PASS END=160053974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 160053975 . T . PASS END=160053984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr1 160053985 . G . PASS END=160053991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 160053992 . C . PASS END=160053992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 160053993 . G . PASS END=160054063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,762:0,62,255:26,0 chr1 160054064 . A . PASS END=160054066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 160054067 . G . PASS END=160054144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,845:0,66,255:26,0 chr1 160054145 . G . PASS END=160054145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 160054146 . C . PASS END=160054149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 160054150 . C . PASS END=160054150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:20,0 chr1 160054151 . T . PASS END=160054151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 160054152 . T . PASS END=160054152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 160054153 . C . PASS END=160054153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160054154 . C . PASS END=160054155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 160054156 . C . PASS END=160054162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 160054163 . A . PASS END=160054180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,721:0,47,255:19,0 chr1 160054181 . A . PASS END=160054194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 160054195 . C . PASS END=160054210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 160054211 . C . PASS END=160054213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 160054214 . T . PASS END=160054228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 160054229 . G . PASS END=160054240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 160054241 . C . PASS END=160054283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,499:0,45,255:17,0 chr1 160054284 . G . PASS END=160054284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 160054285 . C . PASS END=160054289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 160054290 . T . PASS END=160054293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 160054294 . C . PASS END=160054317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 160054318 . G . PASS END=160054321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 160054322 . G . PASS END=160054322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 160054323 . C . PASS END=160054341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 160054342 . C . PASS END=160054342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 160054343 . T . PASS END=160054348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 160054349 . G . PASS END=160054349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 160054350 . C . PASS END=160054350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 160054351 . C . PASS END=160054351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 160054352 . G . PASS END=160054364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,504:0,31,255:13,0 chr1 160054365 . G . PASS END=160054365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 160054366 . C . PASS END=160054369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 160054370 . G . PASS END=160054370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 160054371 . G . PASS END=160054377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 160054378 . C . PASS END=160054378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:11,0 chr1 160054379 . T . PASS END=160054380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 160054381 . C . PASS END=160054381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:10,0 chr1 160054382 . C . PASS END=160054384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:14:0,31,495:0,31,255:11,0 chr1 160054385 . A . PASS END=160054386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:10,0 chr1 160054387 . G . PASS END=160054399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 160054400 . G . PASS END=160054402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 160054403 . T . PASS END=160054403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 160054404 . T . PASS END=160054451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,537:0,40,255:19,0 chr1 160054452 . G . PASS END=160054452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 160054453 . C . PASS END=160054456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 160054457 . C . PASS END=160054474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 160054475 . G . PASS END=160054475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 160054476 . A . PASS END=160054477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,756:0,66,255:22,0 chr1 160054478 . T . PASS END=160054479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr1 160054480 . C . PASS END=160054485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 160054486 . G . PASS END=160054486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 160054487 . C . PASS END=160054487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160054488 . T . PASS END=160054488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 160054489 . G . PASS END=160054520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 160054521 . C . PASS END=160054521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160054522 . G . PASS END=160054531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 160054532 . C . PASS END=160054532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 160054533 . G . PASS END=160054536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 160054537 . C . PASS END=160054537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr1 160054538 . T . PASS END=160054542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 160054543 . C . PASS END=160054543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 160054544 . G . PASS END=160054544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160054545 . T . PASS END=160054545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 160054546 . C . PASS END=160054547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160054548 . C . PASS END=160054548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 160054549 . G . PASS END=160054549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160054550 . C . PASS END=160054558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 160054559 . A . PASS END=160054559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 160054560 . T . PASS END=160054560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160054561 . C . PASS END=160054561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:16,0 chr1 160054562 . A . PASS END=160054566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,720:0,44,255:17,0 chr1 160054567 . C . PASS END=160054567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 160054568 . G . PASS END=160054570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 160054571 . A . PASS END=160054571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:15,0 chr1 160054572 . T . PASS END=160054572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 160054573 . C . PASS END=160054573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 160054574 . G . PASS END=160054574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 160054575 . A . PASS END=160054576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 160054577 . G . PASS END=160054578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 160054579 . C . PASS END=160054579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 160054580 . G . PASS END=160054581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 160054582 . C . PASS END=160054582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 160054583 . A . PASS END=160054583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 160054584 . G . PASS END=160054590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 160054591 . C . PASS END=160054591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,565:0,7,255:13,0 chr1 160054592 . T . PASS END=160054594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 160054595 . G . PASS END=160054598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:30:16:0,30,450:0,32,255:14,0 chr1 160054599 . C . PASS END=160054610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:12:0,21,315:0,29,255:9,0 chr1 160054611 . C . PASS END=160054617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 160054618 . G . PASS END=160054618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 160054619 . A . PASS END=160054619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 160054620 . G . PASS END=160054620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,390:0,8,255:10,0 chr1 160054621 . G . PASS END=160054621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 160054622 . G . LowGQ END=160054623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,321:0,0,255:10,0 chr1 160054624 . C . PASS END=160054632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 160054633 . G . PASS END=160054638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 160054639 . C . PASS END=160054639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 160054640 . G . PASS END=160054648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 160054649 . G . LowGQ END=160054650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:8,0 chr1 160054651 . G . PASS END=160054654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 160054655 . A . LowGQ END=160054655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:7,0 chr1 160054656 . T . PASS END=160054659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,303:0,27,255:9,0 chr1 160054660 . G . PASS END=160054660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 160054661 . G . PASS END=160054670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 160057276 . G . PASS END=160057277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 160057278 . A . PASS END=160057281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 160057282 . C . PASS END=160057283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 160057284 . T . PASS END=160057289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr1 160057290 . G . PASS END=160057292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 160057293 . C . PASS END=160057296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160057297 . G . PASS END=160057297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160057298 . C . PASS END=160057298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 160057299 . T . PASS END=160057300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160057301 . C . PASS END=160057301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 160057302 . T . PASS END=160057386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1080:0,86,255:33,0 chr1 160057387 . G . PASS END=160057387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 160057388 . C . PASS END=160057389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160057390 . T . PASS END=160057390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 160057391 . T . PASS END=160057397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 160057398 . A . PASS END=160057398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:27,0 chr1 160057399 . C . PASS END=160057406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 160057407 . G . PASS END=160057407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:24,0 chr1 160057408 . T . PASS END=160057423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,986:0,67,255:26,0 chr1 160057424 . C . PASS END=160057425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:51:25:0,51,765:0,65,255:17,0 chr1 160057426 . G . PASS END=160057434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,67,255:22,0 chr1 160057435 . A . PASS END=160057435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,701:0,41,255:19,0 chr1 160057436 . G . PASS END=160057436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 160057437 . C . PASS END=160057438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:20,0 chr1 160057439 . G . PASS END=160057440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 160057441 . C . PASS END=160057442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:33:24:0,33,804:0,33,255:21,0 chr1 160057443 . G . PASS END=160057443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160057444 . A . PASS END=160057444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 160057445 . G . PASS END=160057446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160057447 . C . PASS END=160057447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:22,0 chr1 160057448 . T . PASS END=160057448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 160057449 . G . PASS END=160057449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160057450 . C . PASS END=160057451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 160057452 . G . PASS END=160057452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160057453 . C . PASS END=160057453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 160057454 . C . PASS END=160057455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 160057456 . G . PASS END=160057456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160057457 . C . PASS END=160057458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:19,0 chr1 160057459 . T . PASS END=160057464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:18,0 chr1 160057465 . C . PASS END=160057465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr1 160057466 . C . PASS END=160057466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:15,0 chr1 160057467 . C . PASS END=160057467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr1 160057468 . A . PASS END=160057469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,46,255:14,0 chr1 160057470 . C . PASS END=160057470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:14,0 chr1 160057471 . T . PASS END=160057471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:14,0 chr1 160057472 . C . PASS END=160057474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:36:18:0,36,540:0,38,255:12,0 chr1 160057475 . C . PASS END=160057475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:11,0 chr1 160057476 . T . PASS END=160057476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 160057477 . G . LowGQ END=160057477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,474:26,0,255:11,0 chr1 160057478 . G . PASS END=160057478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 160057479 . T . PASS END=160057479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:11,0 chr1 160057480 . C . PASS END=160057481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:15:0,20,482:0,20,255:12,0 chr1 160057482 . A . PASS END=160057482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:11,0 chr1 160057483 . T . LowGQ END=160057485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,449:0,0,255:12,0 chr1 160057486 . C . PASS END=160057486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 160057487 . C . PASS END=160057487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 160057488 . A . LowGQ END=160057488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,390:25,0,255:11,0 chr1 160057489 . G . PASS END=160057490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 160057491 . C . PASS END=160057491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 160057492 . G . PASS END=160057493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 160057494 . C . LowGQ END=160057495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,357:10,0,255:13,0 chr1 160057496 . G . PASS END=160057497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 160057498 . A . PASS END=160057499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,486:0,15,255:13,0 chr1 160057500 . G . LowGQ END=160057500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,443:7,0,255:12,0 chr1 160057501 . A . PASS END=160057502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:12,0 chr1 160057503 . A . PASS END=160057503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,421:0,15,255:10,0 chr1 160057504 . A . LowGQ END=160057504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,432:24,0,255:9,0 chr1 160057505 . G . PASS END=160057506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 160057507 . T . LowGQ END=160057507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,412:24,0,255:9,0 chr1 160057508 . G . PASS END=160057508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:10,0 chr1 160057509 . G . PASS END=160057509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 160057510 . A . PASS END=160057510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:9,0 chr1 160057511 . G . PASS END=160057511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:9,0 chr1 160057512 . G . PASS END=160057512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr1 160057513 . A . LowGQ END=160057513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,294:11,0,255:6,0 chr1 160057514 . G . PASS END=160057514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:8,0 chr1 160057515 . G . PASS END=160057515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:8,0 chr1 160057516 . A . LowGQ END=160057516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,263:50,0,255:6,0 chr1 160057517 . G . PASS END=160057517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:8,0 chr1 160057518 . G . PASS END=160057518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 160057519 . G . PASS END=160057519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,335:0,5,255:9,0 chr1 160057520 . G . PASS END=160057520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 160057521 . G . PASS END=160057521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:9,0 chr1 160057522 . C T,G, 69.35 PASS DP=11;MQ=239.53;FractionInformativeReads=0.818 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,1,0:0.889,0.111,0.000:9:0,7,0,0:0,1,1,0:21:109,26,2,273,0,83,309,26,272,307:255,16,0:1,0:6.9346e+01,2.1116e+01,3.7956e-02,2.6820e+02,3.0157e+01,8.1387e+01,3.0436e+02,5.5885e+01,3.0180e+02,3.0522e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,9,0:0,0,7,2 chr1 160057523 . G . PASS END=160057523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,312:0,2,255:9,0 chr1 160057524 . G . PASS END=160057525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,288:0,16,255:9,0 chr1 160057526 . G . LowGQ END=160057529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,5:11:0:11:0,0,132:0,0,200:10,1 chr1 160057530 . G . PASS END=160057530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr1 160057531 . G . PASS END=160057531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,329:0,33,255:11,0 chr1 160057532 . G . PASS END=160057532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 160057533 . G . LowGQ END=160057534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,249:0,0,249:9,0 chr1 160057535 . G . PASS END=160057535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 160057536 . G . PASS END=160057537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 160057538 . T . LowGQ END=160057538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,5:11:0:11:0,0,150:50,0,200:6,0 chr1 160057539 . G . PASS END=160057540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,411:0,36,255:13,0 chr1 160057541 . G . PASS END=160057557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 160057558 . A . PASS END=160057562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 160057563 . C . PASS END=160057574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:24:12:0,24,360:0,26,255:11,0 chr1 160057575 . C . PASS END=160057586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 160057587 . G . PASS END=160057589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 160057590 . A . PASS END=160057598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 160057599 . A . PASS END=160057599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 160057600 . A . PASS END=160057607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,303:0,27,255:9,0 chr1 160061613 . T . PASS END=160061622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1087:0,93,255:31,0 chr1 160061623 . C . PASS END=160061623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 160061624 . G . PASS END=160061694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1143:0,80,255:34,0 chr1 160061695 . C . PASS END=160061708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:24,0 chr1 160061709 . C . PASS END=160061728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:19,0 chr1 160062072 . C . PASS END=160062089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:18,0 chr1 160062090 . C . PASS END=160062103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr1 160062104 . G . PASS END=160062106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 160062107 . C . PASS END=160062107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:26,0 chr1 160062108 . G . PASS END=160062115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 160062116 . C . PASS END=160062119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 160062120 . C . PASS END=160062124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160062125 . T . PASS END=160062125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 160062126 . A . PASS END=160062126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160062127 . C . PASS END=160062163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:25,0 chr1 160062164 . G . PASS END=160062190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,654:0,41,255:19,0 chr1 160062191 . G . PASS END=160062212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,685:0,60,255:23,0 chr1 160062213 . G . PASS END=160062213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 160062214 . C . PASS END=160062217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 160062218 . T . PASS END=160062218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:19,0 chr1 160062219 . G . PASS END=160062221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 160062222 . T . PASS END=160062222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 160062223 . T . PASS END=160062231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 160062232 . C . PASS END=160062340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,566:0,45,255:19,0 chr1 160062341 . T . PASS END=160062364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 160062365 . C . PASS END=160062408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,490:0,41,255:19,0 chr1 160062409 . G . PASS END=160062409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 160062410 . T . PASS END=160062410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 160062411 . T . PASS END=160062413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 160062414 . A . PASS END=160062414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 160062415 . C . PASS END=160062416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 160062417 . G . PASS END=160062417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 160062418 . C . PASS END=160062419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 160062420 . G . PASS END=160062421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 160062422 . G . PASS END=160062470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,630:0,40,255:19,0 chr1 160062471 . C . PASS END=160062471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 160062472 . C . PASS END=160062475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 160062476 . A . PASS END=160062476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 160062477 . G . PASS END=160062480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 160062481 . C . PASS END=160062481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 160062482 . A . PASS END=160062483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:16,0 chr1 160062484 . A . PASS END=160062484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 160062485 . C . PASS END=160062485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 160062714 . C . PASS END=160062716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 160062717 . C . PASS END=160062733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:13,0 chr1 160062734 . G . PASS END=160062753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,468:0,42,255:17,0 chr1 160062754 . A . PASS END=160062754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 160062755 . C . PASS END=160062813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,592:0,41,255:19,0 chr1 160062814 . G . PASS END=160062814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160062815 . T . PASS END=160062815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 160062816 . A . PASS END=160062843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:25,0 chr1 160062844 . C . PASS END=160062844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 160062845 . T . PASS END=160062845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 160062846 . C . PASS END=160062846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 160062847 . T . PASS END=160062876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,65,255:25,0 chr1 160062877 . C . PASS END=160062877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 160062878 . T . PASS END=160062900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 160062901 . C . PASS END=160062930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,52,255:19,0 chr1 160062931 . C . PASS END=160062931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160062932 . T . PASS END=160062932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr1 160062933 . C . PASS END=160063002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 160063003 . G . PASS END=160063037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 160063038 . C . PASS END=160063038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 160063039 . T . PASS END=160063052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,668:0,54,255:18,0 chr1 160063053 . G . PASS END=160063053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 160063054 . C . PASS END=160063056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 160063057 . T . PASS END=160063057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:14,0 chr1 160063058 . T . PASS END=160063061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 160063062 . A . PASS END=160063071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,28,255:10,0 chr1 160063072 . T . PASS END=160063076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 160063077 . C . PASS END=160063092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 160063093 . A . PASS END=160063093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 160063094 . G . PASS END=160063121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 160063500 . A . PASS END=160063502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 160063503 . G . PASS END=160063512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,860:0,63,255:23,0 chr1 160063513 . A . PASS END=160063513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr1 160063514 . T . PASS END=160063516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 160063517 . A . PASS END=160063517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 160063518 . C . PASS END=160063521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 160063522 . G . PASS END=160063524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 160063525 . C . PASS END=160063526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 160063527 . G . PASS END=160063532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 160063533 . C . PASS END=160063533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 160063534 . C . PASS END=160063538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1066:0,90,255:32,0 chr1 160063539 . T . PASS END=160063539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 160063540 . C . PASS END=160063625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1125:0,83,255:35,0 chr1 160063626 . C . PASS END=160063629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 160063630 . C . PASS END=160063638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:28,0 chr1 160063639 . C . PASS END=160063640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1086:0,74,255:28,0 chr1 160063641 . T . PASS END=160063641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 160063642 . G . PASS END=160063651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,1078:0,63,255:26,0 chr1 160063652 . T . PASS END=160063652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160063653 . C . PASS END=160063653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:26,0 chr1 160063654 . G . PASS END=160063661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:29,0 chr1 160063662 . C . PASS END=160063683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,984:0,65,255:25,0 chr1 160063684 . T . PASS END=160063684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 160063685 . G . PASS END=160063692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 160063693 . T . PASS END=160063693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 160063694 . C . PASS END=160063694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 160063695 . G . PASS END=160063717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:23,0 chr1 160063718 . T . PASS END=160063718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 160063719 . C . PASS END=160063727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,900:0,72,255:26,0 chr1 160063728 . A . PASS END=160063753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1078:0,87,255:33,0 chr1 160063754 . T . PASS END=160063754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:32,0 chr1 160063755 . G . PASS END=160063776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1191:0,91,255:35,0 chr1 160063777 . T . PASS END=160063777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 160063778 . G . PASS END=160063866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1213:0,92,255:40,0 chr1 160063867 . C . PASS END=160063871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:32:0,75,1125:0,96,255:26,0 chr1 160063872 . C . PASS END=160063877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160063878 . C . PASS END=160063889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:24:0,60,900:0,70,255:23,0 chr1 160063890 . G . PASS END=160063890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 160063891 . G . PASS END=160063894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 160063895 . G . PASS END=160063909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:18,0 chr1 160063910 . C . PASS END=160063922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:11,0 chr1 160063923 . C . LowGQ END=160063923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,333:6,0,255:9,0 chr1 160063924 . T . PASS END=160063934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:10,0 chr1 160063935 . C . PASS END=160063945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr1 160063946 . A . PASS END=160063946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 160063947 . G . PASS END=160063956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 160063957 . A . PASS END=160063961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 160064659 . C . PASS END=160064662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 160064663 . C . PASS END=160064663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 160064664 . A . PASS END=160064672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,492:0,45,255:17,0 chr1 160064673 . T . PASS END=160064673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 160064674 . T . PASS END=160064676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 160064677 . C . PASS END=160064677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 160064678 . G . PASS END=160064698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,599:0,44,255:19,0 chr1 160064699 . G . PASS END=160064714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:26,0 chr1 160064715 . G . PASS END=160064715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160064716 . T . PASS END=160064716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 160064717 . G . PASS END=160064722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 160064723 . C . PASS END=160064723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:26,0 chr1 160064724 . T . PASS END=160064728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 160064729 . A . PASS END=160064729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:25,0 chr1 160064730 . A . PASS END=160064733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,972:0,67,255:27,0 chr1 160064734 . C . PASS END=160064738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 160064739 . T . PASS END=160064739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:27,0 chr1 160064740 . C . PASS END=160064741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 160064742 . T . PASS END=160064742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 160064743 . G . PASS END=160064760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:30,0 chr1 160064761 . T . PASS END=160064761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 160064762 . C . PASS END=160064778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:32,0 chr1 160064779 . C . PASS END=160064779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 160064780 . A . PASS END=160064798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1150:0,85,255:34,0 chr1 160064799 . T . PASS END=160064799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1191:0,69,255:32,0 chr1 160064800 . G . PASS END=160064866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1250:0,91,255:40,0 chr1 160064867 . A . PASS END=160064867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1459:0,74,255:39,0 chr1 160064868 . A . PASS END=160064978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,86,255:38,0 chr1 160064979 . G . PASS END=160064984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr1 160064985 . C . PASS END=160065020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:16,0 chr1 160065021 . G . PASS END=160065034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 160065035 . T . PASS END=160065036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 160068199 . C . PASS END=160068201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 160068202 . G . PASS END=160068202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 160068203 . C . PASS END=160068205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 160068206 . T . PASS END=160068206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,599:0,18,255:18,0 chr1 160068207 . A . PASS END=160068207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 160068208 . G . PASS END=160068208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:18,0 chr1 160068209 . C . PASS END=160068216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 160068217 . G . PASS END=160068217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 160068218 . C . PASS END=160068220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 160068221 . C . PASS END=160068221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:18,0 chr1 160068222 . G . PASS END=160068225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 160068226 . G . PASS END=160068226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 160068227 . C . PASS END=160068228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 160068229 . A . PASS END=160068232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 160068233 . C . PASS END=160068240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160068241 . G . PASS END=160068241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 160068242 . C . PASS END=160068261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 160068262 . T . PASS END=160068262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 160068624 . C . LowGQ END=160068628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,100:0,0,115:4,0 chr1 160068629 . A C, 59.55 PASS DP=5;MQ=233.90;FractionInformativeReads=0.800 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,4,0:1.000,0.000:4:0,1,0:0,3,0:10:97,12,0,155,12,155:233,18,0:0,0:5.9550e+01,9.5497e+00,5.1080e-01,1.5259e+02,4.4320e+01,1.5559e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,3:0,0,4,0 chr1 160068630 . G . LowGQ END=160068636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,137:4,0 chr1 160077854 . C . PASS END=160077854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:75:0,120,1800:0,187,255:40,0 chr1 160085506 . G . PASS END=160085506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 160085652 . A . PASS END=160085663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1357:0,98,255:37,0 chr1 160090690 . C . PASS END=160090690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 160090696 . G . PASS END=160090697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 160090698 . T . PASS END=160090698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 160090699 . G . PASS END=160090703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 160090704 . T . PASS END=160090706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 160090707 . G . PASS END=160090719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,886:0,66,255:24,0 chr1 160090720 . G . PASS END=160090720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 160090721 . C . PASS END=160090728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 160090729 . G . PASS END=160090732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 160090733 . A . PASS END=160090741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 160090742 . G . PASS END=160090742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:27,0 chr1 160090743 . C . PASS END=160090743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 160090744 . G . PASS END=160090744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 160090745 . G . PASS END=160090745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 160090746 . C . PASS END=160090746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160090747 . A . PASS END=160090751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 160090752 . G . PASS END=160090762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 160090763 . A . PASS END=160090772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:26,0 chr1 160090773 . G . PASS END=160090773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr1 160090774 . G . PASS END=160090776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,992:0,78,255:26,0 chr1 160090777 . G . PASS END=160090777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:24,0 chr1 160090778 . A . PASS END=160090801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,909:0,62,255:26,0 chr1 160090803 . G . PASS END=160090803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:22,0 chr1 160090970 . T . PASS END=160090970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1419:0,114,255:38,0 chr1 160090982 . G . PASS END=160091041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:40:0,81,1215:0,93,255:40,0 chr1 160093003 . G . PASS END=160093067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:31:0,90,1113:0,90,255:40,0 chr1 160093068 . T . PASS END=160093068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1549:0,77,255:37,0 chr1 160093069 . C . PASS END=160093184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1197:0,86,255:40,0 chr1 160093185 . G . PASS END=160093185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 160093186 . G . PASS END=160093186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 160093187 . A . PASS END=160093187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160093188 . T . PASS END=160093204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,71,255:26,0 chr1 160093205 . A . PASS END=160093205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 160093206 . T . PASS END=160093206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160093209 . G . PASS END=160093209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160093733 . C . PASS END=160093734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160093735 . A . PASS END=160093737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160093738 . T . PASS END=160093738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 160093739 . C . PASS END=160093821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:28:0,83,1025:0,83,255:37,0 chr1 160093822 . T . PASS END=160093822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 160093823 . T . PASS END=160093823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 160093824 . C . PASS END=160093824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 160093825 . C . PASS END=160093832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 160093833 . A . PASS END=160093833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 160093834 . C . PASS END=160093834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160093835 . A . PASS END=160093846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,77,255:26,0 chr1 160094085 . G . PASS END=160094220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,103,1575:0,103,255:40,0 chr1 160094920 . C . PASS END=160094920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 160094926 . G . PASS END=160095018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,552:0,41,255:19,0 chr1 160095019 . T . PASS END=160095041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,34,255:13,0 chr1 160095042 . A . PASS END=160095043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 160095046 . G . PASS END=160095046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 160097342 . G . PASS END=160097352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 160097353 . G . PASS END=160097357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr1 160097358 . T . PASS END=160097358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 160097359 . G . PASS END=160097372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,584:0,51,255:18,0 chr1 160097373 . A . PASS END=160097376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:23,0 chr1 160097377 . C . PASS END=160097377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 160097378 . G . PASS END=160097379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 160097380 . A . PASS END=160097380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 160097381 . C . PASS END=160097384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 160097385 . G . PASS END=160097385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 160097386 . A . PASS END=160097391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,953:0,65,255:26,0 chr1 160097392 . C . PASS END=160097392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 160097393 . G . PASS END=160097397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 160097398 . G . PASS END=160097402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160097403 . T . PASS END=160097403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 160097404 . C . PASS END=160097414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:29,0 chr1 160097415 . C . PASS END=160097415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 160097416 . C . PASS END=160097419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160097420 . A . PASS END=160097420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:27,0 chr1 160097421 . G . PASS END=160097421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160097422 . G . PASS END=160097422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 160097423 . T . PASS END=160097561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1103:0,80,255:40,0 chr1 160097562 . C . PASS END=160097579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:24:0,60,900:0,72,255:26,0 chr1 160097580 . C . PASS END=160097588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 160097589 . G . PASS END=160097590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 160097591 . G . PASS END=160097592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160097593 . C . PASS END=160097599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160097600 . C . PASS END=160097610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 160097615 . G . PASS END=160097615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 160097617 . G . PASS END=160097617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 160098437 . A . PASS END=160098437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 160098442 . G . PASS END=160098449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:18,0 chr1 160098450 . G . PASS END=160098469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:26,0 chr1 160098470 . T . PASS END=160098470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 160098471 . G . PASS END=160098471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160098472 . G . PASS END=160098472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160098473 . C . PASS END=160098473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 160098474 . A . PASS END=160098474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 160098475 . C . PASS END=160098477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160098478 . A . PASS END=160098478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 160098479 . A . PASS END=160098513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1123:0,80,255:32,0 chr1 160098514 . A . PASS END=160098514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,940:0,60,255:25,0 chr1 160098515 . C . PASS END=160098515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160098516 . G . PASS END=160098517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1092:0,74,255:26,0 chr1 160098518 . T . PASS END=160098523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 160098524 . C . PASS END=160098524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 160098525 . C . PASS END=160098527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr1 160098528 . G . PASS END=160098528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 160098529 . T . PASS END=160098540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 160098541 . T . PASS END=160098541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 160098542 . C . PASS END=160098544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160098545 . A . PASS END=160098546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 160098547 . A . PASS END=160098549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 160098550 . A . PASS END=160098551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 160098552 . G . PASS END=160098561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:28,0 chr1 160098562 . A . PASS END=160098563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 160098564 . C . PASS END=160098566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 160098567 . G . PASS END=160098567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 160098568 . A . PASS END=160098576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:30,0 chr1 160098577 . A . PASS END=160098577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 160098578 . C . PASS END=160098578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr1 160098579 . C . PASS END=160098579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 160098580 . G . PASS END=160098583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 160098584 . C . PASS END=160098586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 160098587 . A . PASS END=160098587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:25,0 chr1 160098588 . C . PASS END=160098596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,947:0,64,255:25,0 chr1 160098597 . C . PASS END=160098597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 160098598 . G . PASS END=160098600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,876:0,61,255:23,0 chr1 160098601 . A . PASS END=160098601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr1 160098602 . A . PASS END=160098607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 160098608 . T . PASS END=160098608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 160098609 . C . PASS END=160098611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160098612 . T . PASS END=160098613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,768:0,33,255:22,0 chr1 160098614 . A . PASS END=160098616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 160098617 . C . PASS END=160098618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 160098619 . G . PASS END=160098620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160098621 . C . PASS END=160098629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,765:0,50,255:19,0 chr1 160098630 . A . PASS END=160098630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:16,0 chr1 160098631 . G . PASS END=160098634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,676:0,41,255:17,0 chr1 160098635 . A . PASS END=160098635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 160098636 . G . PASS END=160098640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr1 160098645 . T . PASS END=160098645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 160098770 . G . PASS END=160098788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 160098789 . A . PASS END=160098792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160098793 . C . PASS END=160098793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 160098794 . C . PASS END=160098799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160098800 . G . PASS END=160098824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,884:0,63,255:24,0 chr1 160098825 . T . PASS END=160098825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 160098826 . C . PASS END=160098844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:22,0 chr1 160098845 . T . PASS END=160098870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,53,255:19,0 chr1 160098871 . G . PASS END=160098879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 160099056 . C . PASS END=160099066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,62,255:26,0 chr1 160099067 . T . PASS END=160099071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1019:0,81,255:28,0 chr1 160099072 . A . PASS END=160099072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 160099073 . T . PASS END=160099190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1103:0,87,255:40,0 chr1 160099195 . G . PASS END=160099195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:29,0 chr1 160099892 . C . PASS END=160099897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 160099898 . A . PASS END=160099910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 160099911 . A . PASS END=160099911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,644:0,33,255:20,0 chr1 160099912 . A . PASS END=160099918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:25,0 chr1 160099919 . C . PASS END=160099920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 160099921 . C . PASS END=160099921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 160099922 . C . PASS END=160099937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 160099938 . T . PASS END=160099938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160099939 . G . PASS END=160099942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160099943 . A . PASS END=160099943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:26,0 chr1 160099944 . A . PASS END=160099979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1252:0,87,255:36,0 chr1 160099980 . C . PASS END=160099980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:34,0 chr1 160099981 . C . PASS END=160100081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:39:0,102,1452:0,102,255:40,0 chr1 160100203 . C . PASS END=160100204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:29,0 chr1 160100209 . T . PASS END=160100209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 160100212 . G . PASS END=160100221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1170:0,83,255:32,0 chr1 160100222 . A . PASS END=160100222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,973:0,65,255:29,0 chr1 160100223 . C . PASS END=160100243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1152:0,96,255:36,0 chr1 160100244 . T . PASS END=160100244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:33,0 chr1 160100245 . T . PASS END=160100352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:32:0,90,1224:0,92,255:40,0 chr1 160100353 . A . PASS END=160100353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:29,0 chr1 160100354 . T . PASS END=160100376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr1 160100377 . C . PASS END=160100378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160100379 . G . PASS END=160100387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,68,255:18,0 chr1 160100390 . A . PASS END=160100390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 160104274 . G . PASS END=160104294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,970:0,75,255:26,0 chr1 160104295 . C . PASS END=160104410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,958:0,81,255:40,0 chr1 160104935 . A . PASS END=160104936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160104937 . A . PASS END=160104937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:29,0 chr1 160104938 . A . PASS END=160105085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:31:0,83,1150:0,83,255:40,0 chr1 160105093 . C . PASS END=160105093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,99,1485:0,150,255:33,0 chr1 160105224 . G . PASS END=160105224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160105225 . G . PASS END=160105225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 160105226 . A . PASS END=160105227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160105228 . C . PASS END=160105228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 160105229 . C . PASS END=160105229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160105230 . A . PASS END=160105230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 160105231 . T . PASS END=160105234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 160105235 . G . PASS END=160105236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 160105237 . C . PASS END=160105246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 160105247 . T . PASS END=160105247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr1 160105248 . G . PASS END=160105248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 160105249 . A . PASS END=160105249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,901:0,50,255:24,0 chr1 160105250 . C . PASS END=160105263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,931:0,67,255:25,0 chr1 160105264 . C . PASS END=160105264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160105265 . C . PASS END=160105292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,825:0,72,255:26,0 chr1 160105293 . A . PASS END=160105294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 160105295 . T . PASS END=160105299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr1 160105300 . T . PASS END=160105300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:22,0 chr1 160105301 . G . PASS END=160105305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:24,0 chr1 160105306 . T . PASS END=160105306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,843:0,45,255:21,0 chr1 160105307 . C . PASS END=160105314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:25,0 chr1 160105315 . C . PASS END=160105315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:21,0 chr1 160105316 . T . PASS END=160105358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 160105359 . A . PASS END=160105359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 160105360 . A . PASS END=160105364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 160105365 . G . PASS END=160105365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 160105366 . C . PASS END=160105384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,878:0,72,255:24,0 chr1 160105385 . G . PASS END=160105392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,59,255:17,0 chr1 160105622 . C . PASS END=160105622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 160105629 . G . PASS END=160105646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,621:0,48,255:19,0 chr1 160105647 . A . PASS END=160105648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 160105649 . T . PASS END=160105649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 160105650 . T . PASS END=160105669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:26,0 chr1 160105670 . A . PASS END=160105685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:31,0 chr1 160105686 . T . PASS END=160105686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:30,0 chr1 160105687 . C . PASS END=160105757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1081:0,80,255:33,0 chr1 160105758 . T . PASS END=160105758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1016:0,76,255:28,0 chr1 160105759 . T . PASS END=160105767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 160105768 . C . PASS END=160105783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,68,255:26,0 chr1 160106037 . G . PASS END=160106063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:31:0,88,1144:0,88,255:39,0 chr1 160106064 . G . PASS END=160106064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1321:0,65,255:38,0 chr1 160106065 . C . PASS END=160106155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,97,255:40,0 chr1 160106156 . G . PASS END=160106156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:27,0 chr1 160106157 . A . PASS END=160106160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 160106175 . G . PASS END=160106175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 160106346 . C . PASS END=160106346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 160106353 . C . PASS END=160106353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 160106360 . G . PASS END=160106478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:29:0,82,1102:0,82,255:40,0 chr1 160106479 . C . PASS END=160106479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:32,0 chr1 160106480 . T . PASS END=160106491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,94,255:34,0 chr1 160106492 . A . PASS END=160106493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,95,255:26,0 chr1 160106494 . G . PASS END=160106505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:32:0,66,990:0,80,255:25,0 chr1 160106691 . A . PASS END=160106821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:41:0,90,1418:0,90,255:40,0 chr1 160109430 . G . PASS END=160109531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:33:0,84,1260:0,99,255:40,0 chr1 160109683 . A . PASS END=160109764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:37:0,84,1260:0,95,255:40,0 chr1 160109765 . T . PASS END=160109765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:25,0 chr1 160109766 . A . PASS END=160109769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,98,255:27,0 chr1 160109770 . T . PASS END=160109774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:31:0,69,1035:0,93,255:25,0 chr1 160109780 . C . PASS END=160109780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 160111084 . G . PASS END=160111112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,125,255:40,0 chr1 160111130 . C . PASS END=160111130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 160111137 . T . PASS END=160111137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 160111185 . G . PASS END=160111185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:36,0 chr1 160111232 . A . PASS END=160111232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 160111255 . G . PASS END=160111255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr1 160111259 . C . PASS END=160111259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 160111287 . C . PASS END=160111287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 160111398 . G . PASS END=160111398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160111495 . C . PASS END=160111495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 160111600 . G . PASS END=160111600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,860:0,69,255:23,0 chr1 160111623 . C . PASS END=160111623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160111647 . G . PASS END=160111647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160111760 . A . PASS END=160111760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 160111962 . C . PASS END=160111962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 160111982 . G . PASS END=160111982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 160112022 . A . PASS END=160112022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 160112044 . T . PASS END=160112044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 160112119 . G . PASS END=160112119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 160112147 . A . PASS END=160112147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 160112659 . G . PASS END=160112659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160112742 . C . PASS END=160112742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 160112751 . C . PASS END=160112751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160112824 . C . PASS END=160112824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 160112849 . C . PASS END=160112849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 160112927 . G . PASS END=160112927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 160112947 . C . PASS END=160112947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 160113065 . T . PASS END=160113065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:34,0 chr1 160113177 . G . PASS END=160113177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160113182 . C . PASS END=160113182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 160113185 . A . PASS END=160113185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 160113259 . T . PASS END=160113259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 160113296 . A . PASS END=160113296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 160113335 . C . PASS END=160113335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,126,255:27,0 chr1 160121831 . A . PASS END=160121960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,92,255:40,0 chr1 160121961 . A . PASS END=160121968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:34:0,63,945:0,91,255:25,0 chr1 160121969 . G . PASS END=160121969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:5:34:0,5,848:0,5,255:17,0 chr1 160121970 . T . PASS END=160121971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,922:0,62,255:20,0 chr1 160121972 . G . PASS END=160121972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,840:0,43,255:20,0 chr1 160121973 . T . PASS END=160121975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,87,255:21,0 chr1 160121976 . T . PASS END=160121977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr1 160122955 . G . PASS END=160123014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:38:0,81,1188:0,81,255:40,0 chr1 160123156 . A . PASS END=160123177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr1 160123178 . T . PASS END=160123178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 160123179 . G . PASS END=160123185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,970:0,78,255:26,0 chr1 160124835 . G . PASS END=160124837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1357:0,108,255:36,0 chr1 160124838 . C . PASS END=160124874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1222:0,92,255:37,0 chr1 160124875 . G A, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.539;ReadPosRankSum=4.539;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,16,0:0.552,0.000:29:9,5,0:4,11,0:48:85,0,49,556,446,1002:255,0,255:18,0:5.0000e+01,6.8081e-05,5.2471e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,10,2,14:5,8,11,5 chr1 160124876 . T . PASS END=160124891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:37:0,103,1301:0,103,255:40,0 chr1 160124892 . A . PASS END=160124892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,7:40:4:40:0,4,998:0,4,255:31,0 chr1 160124893 . C . PASS END=160124896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:87:40:0,87,1311:0,87,255:38,0 chr1 160124897 . A . LowGQ END=160124897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,11:42:0:42:0,0,814:135,0,255:30,0 chr1 160124898 . C . PASS END=160124903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:39,0 chr1 160124904 . A . LowGQ END=160124904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,13:42:0:42:0,0,671:156,0,255:28,0 chr1 160124905 . C . PASS END=160124906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,102,1530:0,123,255:38,0 chr1 160124907 . A . PASS END=160124907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:14:42:0,14,1083:0,14,255:31,0 chr1 160124908 . C . PASS END=160124908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr1 160124909 . T . LowGQ END=160124909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,10:44:0:44:0,0,989:56,0,255:29,0 chr1 160124910 . C . PASS END=160124911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1472:0,96,255:35,0 chr1 160124912 . A . PASS END=160124912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1280:0,62,255:33,0 chr1 160124913 . G . LowGQ END=160124913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,10:43:0:43:0,0,914:96,0,255:29,0 chr1 160124914 . A . PASS END=160124914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,108,1620:0,112,255:35,0 chr1 160124915 . A . PASS END=160124915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1242:0,62,255:33,0 chr1 160124916 . T . PASS END=160124916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:45:43:0,45,1099:0,45,255:33,0 chr1 160124917 . G . LowGQ END=160124917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,8:42:0:42:0,0,1006:21,0,255:33,0 chr1 160124918 . G . PASS END=160124919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1366:0,100,255:37,0 chr1 160124920 . T . LowGQ END=160124920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:0:39:0,0,1047:5,0,255:33,0 chr1 160124921 . C . PASS END=160124922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1228:0,84,255:36,0 chr1 160124923 . A . PASS END=160124923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1148:0,51,255:35,0 chr1 160124924 . A . PASS END=160124924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1262:0,100,255:35,0 chr1 160124925 . T . LowGQ END=160124925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:0:39:0,0,1065:2,0,255:32,0 chr1 160124926 . T . PASS END=160124926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1304:0,84,255:34,0 chr1 160124927 . C . PASS END=160124927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:48:38:0,48,1155:0,48,255:33,0 chr1 160124928 . T . PASS END=160124928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1247:0,64,255:34,0 chr1 160124929 . G . PASS END=160124932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1390:0,86,255:38,0 chr1 160124933 . G . PASS END=160124933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1141:0,50,255:33,0 chr1 160124934 . C . PASS END=160124934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:34,0 chr1 160124935 . A . PASS END=160124935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1286:0,45,255:34,0 chr1 160124936 . A . PASS END=160124936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1357:0,98,255:34,0 chr1 160124937 . C . PASS END=160124937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1341:0,62,255:30,0 chr1 160124938 . T . LowGQ END=160124938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:0:39:0,0,1106:19,0,255:28,0 chr1 160124939 . G . PASS END=160124941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:41:0,102,1530:0,106,255:35,0 chr1 160124942 . C . PASS END=160124942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1365:0,76,255:33,0 chr1 160124943 . G . PASS END=160124944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,102,1530:0,107,255:34,0 chr1 160124945 . A . PASS END=160124945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:33,0 chr1 160124946 . G . PASS END=160124947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr1 160124948 . C . LowGQ END=160124948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:0:39:0,0,1033:25,0,255:31,0 chr1 160124949 . T . PASS END=160124950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1260:0,94,255:33,0 chr1 160124951 . C . PASS END=160124951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1190:0,56,255:32,0 chr1 160124952 . T . PASS END=160124953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:37:0,98,1373:0,98,255:36,0 chr1 160124954 . C . PASS END=160124955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1349:0,98,255:34,0 chr1 160124956 . T . PASS END=160124956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:25:37:0,25,1186:0,25,255:34,0 chr1 160124957 . C . PASS END=160124961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1332:0,92,255:35,0 chr1 160124962 . T . PASS END=160124962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:34,0 chr1 160124963 . A . PASS END=160124984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,88,255:36,0 chr1 160124985 . T . PASS END=160124985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,904:0,54,255:29,0 chr1 160124986 . T . PASS END=160124986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 160124987 . T . PASS END=160125017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,923:0,62,255:26,0 chr1 160125018 . G . PASS END=160125018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 160125019 . A . PASS END=160125035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 160125036 . A . PASS END=160125038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 160125835 . C . PASS END=160125836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:30,0 chr1 160125837 . C . PASS END=160125837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 160125838 . T . PASS END=160125838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1082:0,63,255:29,0 chr1 160125839 . A . PASS END=160125948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1127:0,80,255:40,0 chr1 160128792 . C . PASS END=160128827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1214:0,91,255:37,0 chr1 160128828 . A . PASS END=160128828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1053:0,77,255:34,0 chr1 160128829 . T . PASS END=160128889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:36:0,92,1302:0,92,255:40,0 chr1 160128890 . T . PASS END=160128890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr1 160128891 . G . PASS END=160128897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1349:0,105,255:35,0 chr1 160128898 . T . PASS END=160128898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr1 160128899 . C . PASS END=160128906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr1 160128907 . T . PASS END=160128907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,997:0,68,255:30,0 chr1 160128908 . C . PASS END=160128914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:31,0 chr1 160128915 . C . PASS END=160128923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,79,255:25,0 chr1 160128924 . A . PASS END=160128926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:51:27:0,51,765:0,71,255:17,0 chr1 160129199 . G . PASS END=160129313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:40:0,81,1215:0,110,255:40,0 chr1 160129314 . A . PASS END=160129316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:25,0 chr1 160133946 . G . PASS END=160133955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:18,0 chr1 160133956 . G . PASS END=160133962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 160133963 . G . PASS END=160133966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,714:0,46,255:19,0 chr1 160133967 . T . PASS END=160133979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 160133980 . C . PASS END=160134167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:28:0,80,1131:0,80,255:40,0 chr1 160134168 . G . PASS END=160134203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:36:0,81,1215:0,90,255:40,0 chr1 160134204 . C . PASS END=160134204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 160134205 . C T, 48.55 PASS DP=35;MQ=250.00;MQRankSum=4.983;ReadPosRankSum=-1.817;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,15,0:0.429,0.000:35:6,9,0:14,6,0:47:83,0,50,536,686,1223:255,0,255:16,0:4.8552e+01,8.2318e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,16,6,9:16,4,8,7 chr1 160134206 . A . PASS END=160134213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,77,255:24,0 chr1 160134214 . T . PASS END=160134214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:28:0,45,675:0,84,255:15,0 chr1 160136318 . G . PASS END=160136322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160136323 . C . PASS END=160136323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 160136324 . C . PASS END=160136330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,962:0,75,255:26,0 chr1 160136331 . T . PASS END=160136332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 160136333 . A . PASS END=160136333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160136334 . C . PASS END=160136334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160136335 . A . PASS END=160136335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 160136336 . G . PASS END=160136338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160136339 . A . PASS END=160136339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 160136340 . A . PASS END=160136349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1157:0,87,255:31,0 chr1 160136350 . G A, 136.37 PASS DP=31;MQ=141.88;FractionInformativeReads=0.968 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,18,0:0,12,0:86:174,89,0,1097,89,1097:255,93,0:0,0:1.3637e+02,8.6368e+01,0.0000e+00,4.5000e+02,1.2114e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,11:0,0,17,13 chr1 160136351 . C . PASS END=160136387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1166:0,86,255:38,0 chr1 160136388 . A . PASS END=160136470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1440:0,93,255:40,0 chr1 160136471 . T . PASS END=160136471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1204:0,70,255:33,0 chr1 160136472 . T . PASS END=160136472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1242:0,59,255:32,0 chr1 160136473 . T . PASS END=160136473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr1 160136474 . G . PASS END=160136474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:32,0 chr1 160136475 . A . PASS END=160136476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1190:0,66,255:30,0 chr1 160136477 . A . PASS END=160136477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:29,0 chr1 160136478 . T . PASS END=160136481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:30,0 chr1 160136482 . C . PASS END=160136483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 160136484 . T . PASS END=160136496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 160136497 . C . PASS END=160136516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 160136758 . G . PASS END=160136777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1070:0,84,255:32,0 chr1 160136778 . T . PASS END=160136778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:31,0 chr1 160136779 . C . PASS END=160136789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:36,0 chr1 160136790 . T . PASS END=160136790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1005:0,74,255:34,0 chr1 160136791 . T . PASS END=160136800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1288:0,92,255:36,0 chr1 160136801 . C . PASS END=160136801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr1 160136802 . C . PASS END=160136857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,89,255:37,0 chr1 160136858 . C . PASS END=160136867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:26,0 chr1 160137068 . A . PASS END=160137215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:36:0,87,1418:0,87,255:40,0 chr1 160137216 . A . PASS END=160137216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1205:0,64,255:30,0 chr1 160137217 . A . PASS END=160137217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 160139463 . G . PASS END=160139473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,433:0,36,255:13,0 chr1 160139474 . G . PASS END=160139510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 160139511 . A . PASS END=160139511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,566:0,27,255:17,0 chr1 160139512 . G . PASS END=160139512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 160139513 . C . PASS END=160139518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,697:0,60,255:20,0 chr1 160139519 . T . PASS END=160139541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 160139542 . A . PASS END=160139542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 160139543 . A . PASS END=160139572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,621:0,51,255:18,0 chr1 160139573 . T . PASS END=160139573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 160139574 . G . PASS END=160139585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 160139586 . C . PASS END=160139589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,543:0,31,255:13,0 chr1 160139590 . G . PASS END=160139599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 160139600 . A . PASS END=160139600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 160139601 . T . PASS END=160139640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,621:0,45,255:18,0 chr1 160139641 . T . PASS END=160139641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 160139642 . C . PASS END=160139651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:10,0 chr1 160139652 . A . PASS END=160139652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:9,0 chr1 160139653 . C . PASS END=160139656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,426:0,33,255:11,0 chr1 160139657 . A . PASS END=160139657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr1 160139658 . C . PASS END=160139661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 160141041 . A . PASS END=160141046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 160141047 . A . PASS END=160141047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,913:0,51,255:25,0 chr1 160141048 . T . PASS END=160141055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr1 160141056 . C . PASS END=160141059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 160141060 . A . PASS END=160141061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1030:0,68,255:27,0 chr1 160141062 . G . PASS END=160141073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 160141074 . A . PASS END=160141074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:28,0 chr1 160141075 . C . PASS END=160141086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1101:0,80,255:34,0 chr1 160141087 . T . PASS END=160141087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1115:0,69,255:32,0 chr1 160141088 . G . PASS END=160141158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,102,1368:0,102,255:40,0 chr1 160141159 . T . PASS END=160141195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:39:0,94,1405:0,94,255:40,0 chr1 160141196 . C T, 163.91 PASS DP=40;MQ=250.00;FractionInformativeReads=0.975 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,20,0:0,19,0:114:202,117,0,1475,117,1475:255,123,0:0,0:1.6391e+02,1.1391e+02,0.0000e+00,4.5000e+02,1.4868e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,21:0,0,21,18 chr1 160141197 . T . PASS END=160141230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,95,255:36,0 chr1 160141375 . G . PASS END=160141402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1143:0,89,255:36,0 chr1 160141403 . C . PASS END=160141403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 160141404 . T . PASS END=160141492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:36:0,101,1427:0,101,255:40,0 chr1 160141493 . T . PASS END=160141493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr1 160141494 . C . PASS END=160141509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,92,255:36,0 chr1 160141510 . C . PASS END=160141533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr1 160141534 . G . PASS END=160141539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 160141540 . G . PASS END=160141544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 160141545 . A . PASS END=160141547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 160143371 . G . PASS END=160143406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:34,0 chr1 160143407 . A . PASS END=160143407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:33,0 chr1 160143408 . A . PASS END=160143498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1164:0,80,255:39,0 chr1 160143499 . C . PASS END=160143507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,71,255:24,0 chr1 160143901 . T . PASS END=160143909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,955:0,75,255:26,0 chr1 160143910 . A . PASS END=160143911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160143912 . C . PASS END=160143914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,986:0,70,255:27,0 chr1 160143915 . T . PASS END=160143919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 160143920 . G . PASS END=160143920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 160143921 . T . PASS END=160144049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1260:0,90,255:40,0 chr1 160144050 . T . PASS END=160144050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:27,0 chr1 160144051 . G . PASS END=160144051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 160144369 . G . PASS END=160144389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:19,0 chr1 160144390 . G . PASS END=160144394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr1 160144395 . C . PASS END=160144395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 160144396 . G . PASS END=160144400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:23,0 chr1 160144401 . G . PASS END=160144401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 160144402 . A . PASS END=160144444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:23:0,61,829:0,61,255:26,0 chr1 160144445 . T . PASS END=160144445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr1 160144446 . G . PASS END=160144473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,772:0,69,255:25,0 chr1 160144474 . C . PASS END=160144474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 160144475 . A . PASS END=160144479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:24,0 chr1 160144480 . G . PASS END=160144503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:18:0,40,621:0,40,255:19,0 chr1 160144504 . A . PASS END=160144504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 160144505 . A . PASS END=160144529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,554:0,51,255:18,0 chr1 160144530 . G . PASS END=160144535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 160144536 . G . PASS END=160144537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 160145882 . G . PASS END=160146007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1225:0,92,255:40,0 chr1 160146008 . T . PASS END=160146008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:28,0 chr1 160146009 . C . PASS END=160146015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:29,0 chr1 160146016 . A . PASS END=160146036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,984:0,65,255:26,0 chr1 160146269 . G . PASS END=160146279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,945:0,62,255:26,0 chr1 160146280 . C . PASS END=160146363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,987:0,80,255:36,0 chr1 160146364 . T . PASS END=160146364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1129:0,71,255:28,0 chr1 160146365 . C . PASS END=160146375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:30:0,80,1141:0,80,255:28,0 chr1 160146376 . G . PASS END=160146376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr1 160146377 . G . PASS END=160146386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 160146387 . A . PASS END=160146387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 160146388 . G . PASS END=160146392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 160147309 . G . PASS END=160147314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 160147315 . T . PASS END=160147326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:24,0 chr1 160147327 . C . PASS END=160147327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 160147328 . T . PASS END=160147331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:25,0 chr1 160147332 . T . PASS END=160147332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 160147333 . T . PASS END=160147333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,929:0,75,255:25,0 chr1 160147334 . C . PASS END=160147336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 160147337 . T . PASS END=160147337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 160147338 . A . PASS END=160147338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 160147339 . C . PASS END=160147344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 160147345 . T . PASS END=160147347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 160147348 . T . PASS END=160147348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 160147349 . A . PASS END=160147351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160147352 . C . PASS END=160147352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 160147353 . C . PASS END=160147360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 160147361 . G . PASS END=160147361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 160147362 . A . PASS END=160147423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1029:0,87,255:31,0 chr1 160147424 . T . PASS END=160147431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:25,0 chr1 160147432 . A . PASS END=160147446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:23:0,51,765:0,56,255:19,0 chr1 160147447 . A . PASS END=160147447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:16,0 chr1 160147448 . G . PASS END=160147454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,47,255:17,0 chr1 160151474 . A . PASS END=160151487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,114,1336:0,114,255:40,0 chr1 160151488 . A . PASS END=160151557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,106,1721:0,106,255:40,0 chr1 160151558 . A . PASS END=160151558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:69:50:0,69,1456:0,69,255:37,0 chr1 160151559 . T . PASS END=160151581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,99,1530:0,99,255:40,0 chr1 160151582 . T . PASS END=160151599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:42:0,84,1260:0,98,255:35,0 chr1 160151600 . A . PASS END=160151604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:66:42:0,66,990:0,110,255:24,0 chr1 160151720 . A . PASS END=160151722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:30,0 chr1 160151723 . C . PASS END=160151723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 160151724 . A . PASS END=160151724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160151725 . A . PASS END=160151725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 160151726 . A . PASS END=160151726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,898:0,51,255:28,0 chr1 160151727 . G . PASS END=160151727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160151728 . T . PASS END=160151728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1031:0,38,255:28,0 chr1 160151729 . C . PASS END=160151732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1131:0,80,255:31,0 chr1 160151733 . A . PASS END=160151733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 160151734 . T . PASS END=160151736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:33,0 chr1 160151737 . T . PASS END=160151737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:31,0 chr1 160151738 . T . PASS END=160151746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:34,0 chr1 160151747 . G . PASS END=160151747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:33,0 chr1 160151748 . G . PASS END=160151749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1335:0,72,255:35,0 chr1 160151750 . G . PASS END=160151802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,87,255:40,0 chr1 160151803 . T . PASS END=160151804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 160151805 . C . PASS END=160151805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:25,0 chr1 160151806 . G . PASS END=160151813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:25,0 chr1 160151814 . C . PASS END=160151814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 160151815 . C . PASS END=160151820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 160151821 . A . PASS END=160151821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 160156066 . G . PASS END=160156157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:36:0,84,1296:0,84,255:40,0 chr1 160156461 . G . PASS END=160156489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:40:0,98,1490:0,98,255:40,0 chr1 160160542 . A . PASS END=160160545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 160160546 . G . PASS END=160160546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 160160547 . T . PASS END=160160562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,853:0,66,255:26,0 chr1 160160563 . G . PASS END=160160579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1047:0,81,255:37,0 chr1 160160580 . G . PASS END=160160580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 160160581 . G . PASS END=160160581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 160160582 . G . PASS END=160160582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 160160583 . T . PASS END=160160583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1340:0,59,255:36,0 chr1 160160584 . C . PASS END=160160820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:37:0,98,1357:0,98,255:40,0 chr1 160162592 . T . PASS END=160162596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 160162597 . A . PASS END=160162597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 160162598 . G . PASS END=160162602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160162603 . A . PASS END=160162603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 160162604 . G . PASS END=160162613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:26,0 chr1 160162614 . A . PASS END=160162616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 160162617 . A . PASS END=160162617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,826:0,64,255:26,0 chr1 160162618 . G . PASS END=160162622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 160162623 . T . PASS END=160162643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 160162644 . C . PASS END=160162644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr1 160162645 . T . PASS END=160162646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 160162647 . A . PASS END=160162648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 160162649 . A . PASS END=160162651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 160162652 . G . PASS END=160162653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,800:0,53,255:21,0 chr1 160162654 . T . PASS END=160162663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 160162664 . G . PASS END=160162664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:19,0 chr1 160162665 . C . PASS END=160162672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:21,0 chr1 160162673 . C . PASS END=160162676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 160163537 . G . PASS END=160163541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:29,0 chr1 160163542 . A . PASS END=160163542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 160163543 . C . PASS END=160163547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 160163548 . G . PASS END=160163548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 160163549 . T . PASS END=160163637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:31:0,90,1349:0,93,255:40,0 chr1 160164802 . G . PASS END=160164802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 160164803 . T . PASS END=160164804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 160164805 . C . PASS END=160164805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 160164806 . T . PASS END=160164913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:31:0,92,1164:0,92,255:40,0 chr1 160165251 . A . PASS END=160165324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:24,0 chr1 160165687 . G . PASS END=160165817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1215:0,93,255:40,0 chr1 160167359 . A . PASS END=160167398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:33:0,82,1305:0,82,255:40,0 chr1 160167399 . A . PASS END=160167399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:29,0 chr1 160167400 . C . PASS END=160167404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 160168465 . A . PASS END=160168465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr1 160168467 . G . PASS END=160168493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1147:0,80,255:39,0 chr1 160168494 . G . PASS END=160168521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:38:0,98,1372:0,98,255:40,0 chr1 160168743 . A . PASS END=160168843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,106,1659:0,106,255:40,0 chr1 160169641 . C . PASS END=160169715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,102,1452:0,102,255:40,0 chr1 160171035 . G . PASS END=160171036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1227:0,99,255:33,0 chr1 160171037 . G . PASS END=160171038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 160171039 . A . PASS END=160171166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:34:0,96,1221:0,101,255:40,0 chr1 160178395 . A . PASS END=160178452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:37:0,84,1260:0,110,255:40,0 chr1 160178453 . C . PASS END=160178454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1219:0,69,255:28,0 chr1 160178455 . G . PASS END=160178455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 160181333 . T . PASS END=160181483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:35:0,87,1305:0,89,255:40,0 chr1 160181484 . G . PASS END=160181486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 160181487 . C . PASS END=160181488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 160181489 . A . PASS END=160181489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:25,0 chr1 160181490 . C . PASS END=160181490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 160181491 . A . PASS END=160181492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:25,0 chr1 160181493 . C . PASS END=160181496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,85,255:28,0 chr1 160181497 . C . PASS END=160181497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:27,0 chr1 160181498 . T . PASS END=160181499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 160181500 . G . PASS END=160181500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:27,0 chr1 160181501 . A . PASS END=160181501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 160181502 . C . PASS END=160181506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,823:0,73,255:27,0 chr1 160182900 . A . PASS END=160182905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1512:0,117,255:40,0 chr1 160182906 . T . PASS END=160182906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:42:40:0,42,1195:0,42,255:38,0 chr1 160182907 . C . PASS END=160183055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:35:0,90,1350:0,105,255:40,0 chr1 160183212 . A . PASS END=160183212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,983:0,79,255:30,0 chr1 160183213 . C . PASS END=160183254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:32,0 chr1 160183255 . T . PASS END=160183255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1056:0,57,255:29,2 chr1 160183256 . C . PASS END=160183256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1124:0,30,255:29,2 chr1 160183257 . C . PASS END=160183257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr1 160183258 . C . PASS END=160183272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:31,0 chr1 160183273 . C . PASS END=160183276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 160186655 . C . PASS END=160186698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,137,255:40,0 chr1 160187382 . T . PASS END=160187394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,604:0,48,255:19,0 chr1 160187395 . C . PASS END=160187397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160187398 . T . PASS END=160187398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 160187399 . G . PASS END=160187399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160187400 . C . PASS END=160187403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160187404 . C . PASS END=160187480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,798:0,63,255:25,0 chr1 160187481 . C . PASS END=160187481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 160187482 . C . PASS END=160187487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,930:0,72,255:24,0 chr1 160187488 . T . PASS END=160187498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr1 160188114 . C . PASS END=160188129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1192:0,95,255:38,0 chr1 160188130 . T . PASS END=160188130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 160188131 . G . PASS END=160188230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:35:0,96,1376:0,96,255:40,0 chr1 160188639 . A . PASS END=160188736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,99,1485:0,110,255:40,0 chr1 160188737 . G . PASS END=160188737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:32,0 chr1 160188738 . G . PASS END=160188753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:33,0 chr1 160188754 . T . PASS END=160188754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,914:0,79,255:27,0 chr1 160188755 . T . PASS END=160188755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:27,0 chr1 160188756 . T . PASS END=160188758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 160190890 . T . PASS END=160190977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:39:0,94,1443:0,94,255:40,0 chr1 160190978 . A . PASS END=160190978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:35,0 chr1 160190979 . G . PASS END=160190985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:34,0 chr1 160190986 . C . PASS END=160191000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:64:26:0,64,925:0,64,255:25,0 chr1 160192441 . C . PASS END=160192558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:97:38:0,97,1335:0,97,255:40,0 chr1 160192559 . T . PASS END=160192559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1171:0,59,255:32,0 chr1 160192560 . T . PASS END=160192560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:33,0 chr1 160192561 . G . PASS END=160192561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 160192562 . A . PASS END=160192562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:29,0 chr1 160192563 . C . PASS END=160192571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1215:0,94,255:30,0 chr1 160194232 . C . PASS END=160194338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1260:0,86,255:40,0 chr1 160194339 . T . PASS END=160194339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr1 160194852 . C . PASS END=160194909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:88:38:0,88,1415:0,88,255:40,0 chr1 160195381 . C . PASS END=160195453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:35:0,87,1305:0,89,255:40,0 chr1 160201087 . C . PASS END=160201089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 160201090 . A . PASS END=160201090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 160201091 . C . PASS END=160201095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,937:0,84,255:30,0 chr1 160201096 . T . PASS END=160201096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 160201097 . G . PASS END=160201197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:86:34:0,86,1159:0,86,255:40,0 chr1 160206925 . G . PASS END=160207019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:38:0,111,1665:0,114,255:40,0 chr1 160208397 . C . PASS END=160208409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 160208410 . C . PASS END=160208422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr1 160208423 . C . PASS END=160208423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 160208424 . C . PASS END=160208438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:19,0 chr1 160208439 . C . PASS END=160208439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 160208440 . T . PASS END=160208440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 160208441 . T . PASS END=160208467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,923:0,66,255:25,0 chr1 160208468 . C . PASS END=160208468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 160208469 . T . PASS END=160208469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 160208470 . A . PASS END=160208496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr1 160208497 . A . PASS END=160208504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 160208505 . A . PASS END=160208505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr1 160208506 . G . PASS END=160208528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,831:0,66,255:25,0 chr1 160208529 . A . PASS END=160208529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 160208530 . A . PASS END=160208537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr1 160209388 . C . PASS END=160209528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1247:0,86,255:40,0 chr1 160209529 . T . PASS END=160209529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 160209530 . G . PASS END=160209536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 160209537 . G . PASS END=160209538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1139:0,77,255:26,0 chr1 160209539 . C . PASS END=160209539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 160209540 . G . PASS END=160209546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,80,255:26,0 chr1 160209547 . A . PASS END=160209547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160209548 . T . PASS END=160209551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 160209552 . A . PASS END=160209557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 160209558 . C . PASS END=160209600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,886:0,62,255:26,0 chr1 160209601 . C . PASS END=160209601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 160209602 . T . PASS END=160209614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 160209615 . G . PASS END=160209616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 160209617 . G . PASS END=160209638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,961:0,65,255:26,0 chr1 160209639 . C . PASS END=160209706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1031:0,81,255:30,0 chr1 160209707 . C . PASS END=160209707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 160209708 . G . PASS END=160209709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr1 160209710 . G . PASS END=160209710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160209711 . C . PASS END=160209738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,86,255:31,0 chr1 160209739 . G . PASS END=160209739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr1 160209740 . G . PASS END=160209742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160209743 . G . PASS END=160209743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr1 160209744 . G . PASS END=160209746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr1 160209747 . G . PASS END=160209749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 160209750 . C . PASS END=160209750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 160209751 . T . PASS END=160209754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160209755 . C . PASS END=160209755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 160209756 . A . PASS END=160209762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 160209763 . T . PASS END=160209801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 160209802 . T . PASS END=160209802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 160209803 . A . PASS END=160209814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 160209815 . T . PASS END=160209815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 160209816 . C . PASS END=160209825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,876:0,69,255:23,0 chr1 160209826 . G . PASS END=160209826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 160209827 . T . PASS END=160209840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr1 160209841 . A . PASS END=160209841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:23,0 chr1 160209842 . G . PASS END=160209843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,1008:0,68,255:25,0 chr1 160209844 . C . PASS END=160209846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 160209847 . C . PASS END=160209847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr1 160209848 . T . PASS END=160209848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 160209849 . T . PASS END=160209849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 160209850 . G . PASS END=160209850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 160209851 . C . PASS END=160209854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:24,0 chr1 160209855 . G . PASS END=160209862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:35:0,87,1305:0,95,255:30,0 chr1 160209863 . C . PASS END=160209863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:28,0 chr1 160209864 . G . PASS END=160209882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,889:0,82,255:33,0 chr1 160209883 . C . PASS END=160209883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1050:0,69,255:30,0 chr1 160209884 . T . PASS END=160209901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1113:0,85,255:33,0 chr1 160209902 . T . PASS END=160209902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:32,0 chr1 160209903 . C . PASS END=160209904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,99,1485:0,105,255:35,0 chr1 160209905 . T . PASS END=160209906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:36:0,64,1156:0,64,255:34,0 chr1 160209907 . T . PASS END=160209922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:36:0,85,1203:0,85,255:39,1 chr1 160209923 . T . PASS END=160209923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1329:0,51,255:39,0 chr1 160209924 . G . PASS END=160209998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1281:0,87,255:40,0 chr1 160209999 . T . PASS END=160209999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1221:0,61,255:30,0 chr1 160210000 . C . PASS END=160210083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1062:0,83,255:37,0 chr1 160210084 . C . PASS END=160210084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 160210085 . T . PASS END=160210100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 160210101 . A . PASS END=160210107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:70:29:0,70,954:0,70,255:26,0 chr1 160210108 . C . PASS END=160210110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 160210111 . C . PASS END=160210133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,68,255:25,0 chr1 160210134 . T . PASS END=160210141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:16,0 chr1 160210142 . G . PASS END=160210144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:21:0,39,585:0,63,255:13,0 chr1 160210145 . C . PASS END=160210145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 160210146 . T . PASS END=160210160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:14:0,35,585:0,35,255:13,0 chr1 160213750 . C . PASS END=160213824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:69:0,120,1800:0,196,255:40,0 chr1 160246624 . T . PASS END=160246624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 160246786 . A . PASS END=160246786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1427:0,82,255:38,0 chr1 160246805 . T . PASS END=160246805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 160246918 . C . PASS END=160246918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 160246928 . G . PASS END=160246928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 160246958 . G . PASS END=160246958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 160247117 . C . PASS END=160247117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 160247186 . G . PASS END=160247186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 160247273 . A . PASS END=160247273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,94,255:29,0 chr1 160247361 . A . PASS END=160247361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160247489 . G . PASS END=160247489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 160247551 . T . PASS END=160247551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 160247580 . G . PASS END=160247580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 160247596 . A . PASS END=160247596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 160247749 . C . PASS END=160247749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 160247879 . G . PASS END=160247879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 160247891 . A . PASS END=160247891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 160247921 . C . PASS END=160247981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,125,255:40,0 chr1 160248006 . C . PASS END=160248006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 160248011 . C . PASS END=160248011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 160248178 . A . PASS END=160248178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 160248196 . G . PASS END=160248196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160248238 . G . PASS END=160248238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 160248272 . C . PASS END=160248272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 160248328 . C . PASS END=160248328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:28,0 chr1 160248343 . C . PASS END=160248343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 160248370 . C . PASS END=160248370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 160248407 . T . PASS END=160248407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1404:0,101,255:33,0 chr1 160248445 . T . PASS END=160248445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 160248477 . G . PASS END=160248477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 160248487 . C . PASS END=160248487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160248600 . G . PASS END=160248600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 160248625 . G . PASS END=160248625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 160248679 . G . PASS END=160248679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 160248759 . C . PASS END=160248759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160248872 . G . PASS END=160248872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160248914 . T . PASS END=160248914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 160248980 . C . PASS END=160248980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160249169 . C . PASS END=160249169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 160249203 . G . PASS END=160249203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 160249263 . C . PASS END=160249263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 160249341 . T . PASS END=160249424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:36:0,84,1260:0,97,255:40,0 chr1 160249561 . T . PASS END=160249635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,154,255:40,0 chr1 160249860 . C . PASS END=160250006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:33:0,86,1233:0,86,255:40,0 chr1 160250007 . T . PASS END=160250007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:31,0 chr1 160250008 . T . PASS END=160250024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,88,255:32,0 chr1 160250025 . C . PASS END=160250036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:26:0,70,978:0,70,255:26,0 chr1 160250038 . T . PASS END=160250038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 160251829 . C . PASS END=160251829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:18,0 chr1 160251830 . T . PASS END=160251853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,631:0,41,255:19,0 chr1 160251854 . G . PASS END=160251859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 160251860 . A . PASS END=160251860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 160251861 . G . PASS END=160251861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:20,0 chr1 160251862 . C . PASS END=160251870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,909:0,66,255:25,0 chr1 160251871 . G . PASS END=160251871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 160251872 . G . PASS END=160251884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr1 160251885 . G . PASS END=160251885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 160251886 . C . PASS END=160251887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1100:0,74,255:26,0 chr1 160251888 . T . PASS END=160251888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:24,0 chr1 160251889 . A . PASS END=160251891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr1 160251892 . A . PASS END=160251895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160251896 . T . PASS END=160251896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 160251897 . G . PASS END=160251924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:29,0 chr1 160251925 . A . PASS END=160251940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 160251941 . C . PASS END=160251945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160251946 . C . PASS END=160251959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr1 160251960 . T . PASS END=160251960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 160251961 . G . PASS END=160251985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:22,0 chr1 160251986 . G . PASS END=160251987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160251988 . G . PASS END=160251990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160252205 . A . PASS END=160252205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 160252207 . C . PASS END=160252292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,111,1665:0,146,255:40,0 chr1 160252299 . G . PASS END=160252299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,105,1575:0,134,255:34,0 chr1 160252734 . C . PASS END=160252899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:34:0,86,1189:0,86,255:40,0 chr1 160252903 . C . PASS END=160252904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:29,0 chr1 160253320 . T . PASS END=160253327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,613:0,40,255:19,0 chr1 160253328 . T . PASS END=160253345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr1 160253346 . T . PASS END=160253346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:24,0 chr1 160253347 . C . PASS END=160253374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,895:0,78,255:26,0 chr1 160253375 . G . PASS END=160253392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:31,0 chr1 160253393 . G . PASS END=160253393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:28,0 chr1 160253394 . G . PASS END=160253404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 160253405 . G . PASS END=160253429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,901:0,78,255:26,0 chr1 160253921 . C . PASS END=160253930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1481:0,90,255:39,0 chr1 160254835 . G . PASS END=160254835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 160254838 . C . PASS END=160254838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 160254845 . T . PASS END=160254845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 160254846 . T . PASS END=160254848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 160254849 . C . PASS END=160254849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 160254850 . A . PASS END=160254851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:22,0 chr1 160254852 . A . PASS END=160254852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,656:0,35,255:21,0 chr1 160254853 . A . PASS END=160254853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 160254854 . G . PASS END=160254854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr1 160254855 . C . PASS END=160254865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,781:0,66,255:24,0 chr1 160254866 . C . PASS END=160254868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 160254869 . T . PASS END=160254870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160254871 . T . PASS END=160254871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 160254872 . C . PASS END=160254872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160254873 . C . PASS END=160254874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 160254875 . C . PASS END=160254877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,884:0,72,255:24,0 chr1 160254878 . C . PASS END=160254878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 160254879 . G . PASS END=160254880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 160254881 . C . PASS END=160254882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 160254883 . C . PASS END=160254883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 160254884 . C . PASS END=160254885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 160254886 . A . PASS END=160254889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 160254890 . T . PASS END=160254890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 160254891 . A . PASS END=160254896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr1 160254897 . T . PASS END=160254897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 160254898 . T . PASS END=160254907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 160254908 . C . PASS END=160254908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 160254909 . G . PASS END=160254910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 160254911 . C . PASS END=160254911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 160254912 . C . PASS END=160254914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,726:0,69,255:23,0 chr1 160254918 . G . PASS END=160254918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 160254931 . T . PASS END=160254931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160259947 . T . PASS END=160260006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:61:0,120,1800:0,154,255:40,0 chr1 160260282 . T . PASS END=160260284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:33,0 chr1 160260285 . G . PASS END=160260285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr1 160260286 . G . PASS END=160260429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1148:0,81,255:40,0 chr1 160260430 . T . PASS END=160260430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1372:0,68,255:35,0 chr1 160260431 . A . PASS END=160260440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:40:0,102,1390:0,103,255:36,0 chr1 160260441 . G . PASS END=160260441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1315:0,73,255:33,0 chr1 160260442 . G . PASS END=160260443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1396:0,101,255:35,0 chr1 160260444 . A . PASS END=160260444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1317:0,62,255:33,0 chr1 160260445 . T . PASS END=160260463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1132:0,88,255:35,0 chr1 160260464 . G . PASS END=160260464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:27,0 chr1 160260465 . G . PASS END=160260476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1166:0,86,255:32,0 chr1 160261125 . C . PASS END=160261134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 160261135 . A . PASS END=160261141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 160261142 . G . PASS END=160261143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 160261144 . T . PASS END=160261144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:26,0 chr1 160261145 . T . PASS END=160261219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1017:0,81,255:34,0 chr1 160261220 . G . PASS END=160261221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 160261222 . G . PASS END=160261230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 160261231 . A . PASS END=160261231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 160261232 . G . PASS END=160261233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 160261234 . A . PASS END=160261286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,862:0,65,255:26,0 chr1 160261605 . T . PASS END=160261605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 160261609 . C . PASS END=160261719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,111,1710:0,111,255:40,0 chr1 160261798 . C . PASS END=160261798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,111,1665:0,132,255:37,0 chr1 160261802 . C . PASS END=160261983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,102,255:40,0 chr1 160261984 . C . PASS END=160261984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 160261985 . C . PASS END=160261986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 160261987 . T . PASS END=160261988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 160262274 . C . PASS END=160262385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:33:0,81,1119:0,82,255:40,0 chr1 160262386 . T . PASS END=160262386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:26,0 chr1 160262387 . T . PASS END=160262391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160262392 . C . PASS END=160262402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,74,255:26,0 chr1 160262403 . T . PASS END=160262410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,720:0,61,255:19,0 chr1 160262956 . C . PASS END=160263024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,134,255:40,0 chr1 160263176 . C . PASS END=160263208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1136:0,81,255:38,0 chr1 160263209 . A . PASS END=160263209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:34,0 chr1 160263210 . A . PASS END=160263240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1115:0,89,255:35,0 chr1 160263241 . C . PASS END=160263241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 160263242 . A . PASS END=160263242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 160263243 . G . PASS END=160263243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1080:0,85,255:24,0 chr1 160263244 . G . PASS END=160263253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:45:29:0,45,675:0,56,255:18,0 chr1 160264274 . C . PASS END=160264383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,110,1793:0,110,255:40,0 chr1 160264558 . C . PASS END=160264647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,102,1530:0,123,255:40,0 chr1 160265526 . C . PASS END=160265540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1243:0,93,255:34,0 chr1 160265541 . T . PASS END=160265541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:32,0 chr1 160265542 . G . PASS END=160265552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1227:0,102,255:34,0 chr1 160265553 . A . PASS END=160265565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1256:0,81,255:39,0 chr1 160265566 . A . PASS END=160265566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1302:0,67,255:36,0 chr1 160265567 . G . PASS END=160265631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:36:0,93,1426:0,93,255:40,0 chr1 160265632 . A . PASS END=160265632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 160265633 . G . PASS END=160265649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1195:0,88,255:34,0 chr1 160265851 . T . PASS END=160265939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,118,1800:0,118,255:40,0 chr1 160267128 . C . PASS END=160267129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1488:0,93,255:40,0 chr1 160267133 . T . PASS END=160267228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,115,1800:0,115,255:40,0 chr1 160267346 . C . PASS END=160267514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:39:0,93,1451:0,93,255:40,2 chr1 160267515 . T . PASS END=160267515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:59:43:0,59,1353:0,59,255:37,2 chr1 160267516 . T . PASS END=160267535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:88:35:0,88,1350:0,88,255:38,0 chr1 160268635 . C . PASS END=160268773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:37:0,84,1260:0,86,255:40,0 chr1 160268774 . T . PASS END=160268781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:36:0,69,1035:0,97,255:26,0 chr1 160268892 . C . PASS END=160269016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:37:0,99,1321:0,100,255:40,0 chr1 160269017 . A . PASS END=160269017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:34,0 chr1 160269018 . G . PASS END=160269034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1402:0,98,255:34,0 chr1 160269035 . T . PASS END=160269035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:51:34:0,51,815:0,51,255:30,0 chr1 160269036 . T . PASS END=160269051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 160269052 . T . PASS END=160269054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:24,0 chr1 160275223 . C . PASS END=160275338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:83:29:0,83,997:0,83,255:40,0 chr1 160275339 . T . PASS END=160275339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,7:62:69:62:0,69,1627:0,69,255:40,0 chr1 160275340 . T . PASS END=160275388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,138,255:40,0 chr1 160275478 . C . PASS END=160275536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,189,255:40,0 chr1 160275537 . T . PASS END=160275563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,182,255:40,0 chr1 160276144 . C . PASS END=160276283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:87:30:0,87,1193:0,90,255:40,0 chr1 160276953 . C . PASS END=160277034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1197:0,83,255:38,0 chr1 160277035 . G . PASS END=160277035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 160278891 . C . PASS END=160278966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:39:0,99,1485:0,117,255:40,0 chr1 160279982 . T . PASS END=160280048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,167,255:40,0 chr1 160281658 . C . PASS END=160281781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1194:0,85,255:40,0 chr1 160281782 . T . PASS END=160281782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 160281783 . A . PASS END=160281783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 160281784 . A . PASS END=160281804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,815:0,68,255:25,0 chr1 160281805 . T . PASS END=160281805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 160281806 . G . PASS END=160281808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 160282873 . A . PASS END=160282873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 160282875 . C . PASS END=160282957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:32:0,96,1127:0,96,255:40,0 chr1 160283780 . C . PASS END=160283786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 160283787 . A . PASS END=160283789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 160283790 . T . PASS END=160283790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 160283791 . A . PASS END=160283801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:35,0 chr1 160283802 . G . PASS END=160283802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:35,0 chr1 160283803 . A . PASS END=160283903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,90,255:40,0 chr1 160283904 . A . PASS END=160283915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1023:0,71,255:24,0 chr1 160293221 . C . PASS END=160293225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:33:0,96,1440:0,99,255:37,0 chr1 160293226 . A . PASS END=160293226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1223:0,64,255:34,0 chr1 160293227 . T . PASS END=160293320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1292:0,81,255:40,0 chr1 160295333 . C . PASS END=160295442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,135,255:40,0 chr1 160302238 . C . PASS END=160302311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:49:0,112,1800:0,112,255:40,2 chr1 160302312 . G . PASS END=160302347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:34:0,81,1215:0,102,255:40,0 chr1 160303393 . C . PASS END=160303415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:96:40:0,96,1496:0,96,255:40,0 chr1 160303416 . G A, 175.04 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,20,0:0,23,0:125:213,128,0,1559,128,1559:255,129,0:0,0:1.7504e+02,1.2504e+02,0.0000e+00,4.5000e+02,1.5981e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,27:0,0,23,20 chr1 160303417 . T . PASS END=160303453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:43:0,97,1584:0,97,255:40,0 chr1 160303454 . G . PASS END=160303469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:93:39:0,93,1395:0,99,255:36,0 chr1 160305032 . A . PASS END=160305112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:43:0,120,1800:0,121,255:40,0 chr1 160305115 . G . PASS END=160305115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 160309694 . T . PASS END=160309694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 160309699 . C . PASS END=160309701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,130,255:40,0 chr1 160309702 . A . PASS END=160309772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,114,1665:0,114,255:40,0 chr1 160309971 . C . PASS END=160310084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,108,1620:0,117,255:40,0 chr1 160312921 . C . PASS END=160312935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1111:0,85,255:34,0 chr1 160312936 . T . PASS END=160312936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,940:0,52,255:28,0 chr1 160312937 . C . PASS END=160312944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1162:0,83,255:31,0 chr1 160312945 . C . PASS END=160312945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 160312946 . G . PASS END=160312952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 160312953 . G . PASS END=160312953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 160312954 . T . PASS END=160312959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 160312960 . T . PASS END=160312960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,972:0,79,255:26,0 chr1 160313187 . A . PASS END=160313188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 160313189 . G . PASS END=160313203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr1 160313204 . T . PASS END=160313205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 160313206 . G . PASS END=160313214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:29,0 chr1 160313215 . C . PASS END=160313215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 160313216 . T . PASS END=160313216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr1 160313217 . G . PASS END=160313244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,931:0,75,255:26,0 chr1 160313245 . T . PASS END=160313245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 160313246 . T . PASS END=160313266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 160313267 . A . PASS END=160313271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 160313494 . G . PASS END=160313509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,227:8,0 chr1 160313510 . C . PASS END=160313510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 160313511 . G . LowGQ END=160313511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:6,0 chr1 160313512 . A . PASS END=160313512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 160313513 . G . PASS END=160313513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 160313514 . C . PASS END=160313599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 160313600 . A . PASS END=160313600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 160313601 . G . PASS END=160313616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 160313617 . G . PASS END=160313617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 160313618 . C . PASS END=160313624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 160314266 . T . PASS END=160314404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:63:0,120,1800:0,136,255:40,0 chr1 160314512 . G . PASS END=160314616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:31:0,87,1189:0,87,255:40,0 chr1 160318789 . C . PASS END=160318790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 160318791 . T . PASS END=160318791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 160318792 . C . PASS END=160318902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1064:0,84,255:40,0 chr1 160318903 . A . PASS END=160318912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:31,0 chr1 160319276 . G . PASS END=160319435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:39:0,81,1215:0,101,255:40,0 chr1 160319436 . G . PASS END=160319441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,86,255:26,0 chr1 160319442 . T . PASS END=160319451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,924:0,81,255:27,0 chr1 160319452 . A . PASS END=160319452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 160319453 . T . PASS END=160319460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 160319895 . G . PASS END=160319901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,976:0,65,255:25,0 chr1 160319902 . C . PASS END=160319904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160319905 . C . PASS END=160319905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 160319906 . A . PASS END=160319907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1092:0,87,255:29,0 chr1 160319908 . T . PASS END=160319908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:28,0 chr1 160319909 . T . PASS END=160320040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:29:0,87,1013:0,87,255:40,0 chr1 160321012 . T . PASS END=160321027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:26,0 chr1 160321028 . A . PASS END=160321075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1055:0,84,255:34,0 chr1 160321076 . A . PASS END=160321078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:29,0 chr1 160321079 . T . PASS END=160321098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1194:0,96,255:32,0 chr1 160321099 . G . PASS END=160321102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 160321103 . T . PASS END=160321121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 160321122 . G . PASS END=160321122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160321123 . C . PASS END=160321123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:25,0 chr1 160321124 . G . PASS END=160321130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 160321131 . C . PASS END=160321131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr1 160321132 . T . PASS END=160321154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 160321155 . C . PASS END=160321162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,720:0,75,255:19,0 chr1 160321486 . A . PASS END=160321595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:44:0,81,1572:0,81,255:40,0 chr1 160321844 . C . PASS END=160321864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:25,0 chr1 160321865 . T . PASS END=160321865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 160321866 . G . PASS END=160321868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 160321869 . A . PASS END=160321870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 160321871 . G . PASS END=160321903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,870:0,61,255:25,0 chr1 160321904 . T . PASS END=160321904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,843:0,45,255:23,0 chr1 160321905 . T . PASS END=160321943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,923:0,62,255:26,0 chr1 160321944 . C . PASS END=160321957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,52,255:18,0 chr1 160321958 . A . PASS END=160321958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 160321959 . C . PASS END=160321966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:17,0 chr1 160321967 . C . PASS END=160321967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:15,0 chr1 160321968 . G . PASS END=160321968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 160321969 . C . PASS END=160321975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 160321976 . A . PASS END=160321982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 160321983 . T . PASS END=160321983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 160321984 . C . PASS END=160321984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 160321985 . T . PASS END=160321987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,566:0,48,255:16,0 chr1 160321988 . T . PASS END=160321988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr1 160321989 . T . PASS END=160321989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:15,0 chr1 160321990 . T . PASS END=160321990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 160321991 . C . PASS END=160321994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:13,0 chr1 160321995 . G . PASS END=160321995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 160321996 . G . PASS END=160321996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 160322677 . G . PASS END=160322782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:36:0,83,1199:0,83,255:40,0 chr1 160322950 . G . PASS END=160323027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1143:0,83,255:40,0 chr1 160323113 . G . PASS END=160323121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 160323908 . G . PASS END=160323924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,817:0,61,255:25,0 chr1 160323925 . C . PASS END=160323926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 160323927 . C . PASS END=160323941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,898:0,62,255:25,0 chr1 160323942 . G . PASS END=160323944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 160323945 . C . PASS END=160323945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 160323946 . T . PASS END=160323990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1097:0,85,255:33,0 chr1 160323991 . T . PASS END=160323991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,963:0,73,255:26,0 chr1 160323992 . C . PASS END=160324003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 160324004 . T . PASS END=160324004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 160324005 . C . PASS END=160324006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160324007 . C . PASS END=160324012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 160324013 . C . PASS END=160324013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:28,0 chr1 160324014 . G . PASS END=160324014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 160324015 . A . PASS END=160324015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:20:30:0,20,897:0,20,255:28,0 chr1 160324016 . T . PASS END=160324030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:30,0 chr1 160324031 . A . PASS END=160324031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 160324032 . A . PASS END=160324034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 160324035 . T . PASS END=160324035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,936:0,59,255:27,0 chr1 160324036 . C . PASS END=160324036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 160324037 . T . PASS END=160324037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 160324038 . C . PASS END=160324042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 160324043 . G . PASS END=160324077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 160324078 . C . PASS END=160324078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 160324079 . A . PASS END=160324079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 160324080 . A . PASS END=160324080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 160325445 . A . PASS END=160325547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:34:0,80,1272:0,80,255:40,0 chr1 160325653 . G . PASS END=160325662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1449:0,101,255:39,0 chr1 160325663 . A . PASS END=160325663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1303:0,65,255:37,0 chr1 160325664 . T . PASS END=160325749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1310:0,92,255:40,0 chr1 160326050 . G . PASS END=160326137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,102,1530:0,117,255:40,0 chr1 160326390 . G . PASS END=160326541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:33:0,86,1231:0,86,255:40,0 chr1 160326542 . G . PASS END=160326542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:31,0 chr1 160326543 . A . PASS END=160326544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1202:0,86,255:31,0 chr1 160326831 . C . PASS END=160326982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,83,255:40,0 chr1 160326983 . T . PASS END=160326983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr1 160326984 . G . PASS END=160326988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 160326989 . C . PASS END=160327031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,870:0,61,255:26,0 chr1 160327032 . A . PASS END=160327032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 160327033 . A . PASS END=160327033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 160327034 . A . PASS END=160327043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr1 160327939 . T . PASS END=160327943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 160327944 . C . PASS END=160327944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1200:0,58,255:31,0 chr1 160327945 . A . PASS END=160328061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:90:33:0,90,1350:0,99,255:40,0 chr1 160340522 . A . PASS END=160340522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 160340523 . T . PASS END=160340523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 160340524 . G . PASS END=160340526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 160340527 . G . PASS END=160340532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 160340533 . C . PASS END=160340533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 160340534 . T . PASS END=160340544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 160340545 . G . PASS END=160340546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,645:0,43,255:19,0 chr1 160340547 . A . PASS END=160340551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 160340552 . G . PASS END=160340556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 160340557 . G . PASS END=160340557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:18,0 chr1 160340558 . C . PASS END=160340560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 160340561 . C . PASS END=160340562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160340563 . C . PASS END=160340563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 160340564 . A . PASS END=160340565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 160340566 . C . PASS END=160340566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 160340567 . C . PASS END=160340567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 160340568 . A . PASS END=160340568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:20,0 chr1 160340569 . C . PASS END=160340575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160340576 . A . PASS END=160340576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 160340577 . C . PASS END=160340589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:24,0 chr1 160340590 . C . PASS END=160340590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 160340591 . A . PASS END=160340595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 160340596 . C . PASS END=160340596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 160340597 . T . PASS END=160340603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 160340604 . G . PASS END=160340606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 160340607 . G . PASS END=160340609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 160340610 . C . PASS END=160340645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:19,0 chr1 160340646 . G . PASS END=160340646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,666:0,21,255:18,0 chr1 160340647 . G . PASS END=160340657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 160340658 . G . PASS END=160340659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 160340660 . G . PASS END=160340660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 160340661 . G . PASS END=160340661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160340662 . C . PASS END=160340662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 160340663 . C . PASS END=160340663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:21,0 chr1 160340664 . C . PASS END=160340666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 160340667 . A . PASS END=160340668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,803:0,61,255:23,0 chr1 160340669 . C . PASS END=160340669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 160340670 . C . PASS END=160340670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:22,0 chr1 160340671 . G . PASS END=160340671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 160340672 . G . PASS END=160340672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:23,0 chr1 160340673 . G . PASS END=160340673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:22,0 chr1 160340674 . A . PASS END=160340674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:22,0 chr1 160340675 . G . PASS END=160340675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 160340676 . A . PASS END=160340676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,759:0,42,255:23,0 chr1 160340677 . G . PASS END=160340678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:24,0 chr1 160340679 . C . PASS END=160340679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:23,0 chr1 160340680 . T . PASS END=160340680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 160340681 . G . PASS END=160340681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160340682 . G . PASS END=160340682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:32:27:0,32,881:0,32,255:22,0 chr1 160340683 . C . PASS END=160340684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:45:26:0,45,875:0,45,255:23,0 chr1 160340685 . G . LowGQ END=160340686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,663:19,0,255:21,0 chr1 160340687 . A . PASS END=160340688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:23:26:0,23,826:0,23,255:23,0 chr1 160340689 . A . LowGQ END=160340689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,676:77,0,255:21,0 chr1 160340690 . G . PASS END=160340690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,812:0,28,255:22,0 chr1 160340691 . A . PASS END=160340691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,687:0,31,255:22,0 chr1 160340692 . C . PASS END=160340692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:23,0 chr1 160340693 . C . LowGQ END=160340700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,5:26:0:26:0,0,673:3,0,255:21,0 chr1 160340701 . T . PASS END=160340701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,798:0,31,255:21,0 chr1 160340702 . C . PASS END=160340702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,773:0,15,255:19,0 chr1 160340703 . T . LowGQ END=160340703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,6:26:0:26:0,0,632:44,0,255:16,0 chr1 160340704 . G . PASS END=160340704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,843:0,45,255:20,0 chr1 160340705 . A . LowGQ END=160340706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,690:2,0,255:18,0 chr1 160340707 . C . PASS END=160340707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:12:26:0,12,757:0,12,255:17,0 chr1 160340708 . C . PASS END=160340708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:20,0 chr1 160340709 . G . PASS END=160340709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 160340710 . C . LowGQ END=160340710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,700:11,0,255:18,0 chr1 160340711 . G . PASS END=160340711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:19,0 chr1 160340712 . A . LowGQ END=160340712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,8:25:0:25:0,0,460:102,0,255:14,0 chr1 160340713 . G . PASS END=160340713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,764:0,55,255:21,0 chr1 160340714 . G . LowGQ END=160340716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,389:11,0,255:18,0 chr1 160340717 . C . PASS END=160340717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 160340718 . G . PASS END=160340718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,574:0,3,255:18,0 chr1 160340719 . C . PASS END=160340719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160340720 . C . PASS END=160340721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:21,0 chr1 160340722 . G . LowGQ END=160340722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,520:42,0,255:17,0 chr1 160340723 . C . PASS END=160340723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,453:0,35,255:20,0 chr1 160340724 . G . LowGQ END=160340724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,458:73,0,255:17,0 chr1 160340725 . C . PASS END=160340725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,539:0,51,255:20,0 chr1 160340726 . C . PASS END=160340726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,639:0,13,255:19,0 chr1 160340727 . G . LowGQ END=160340728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,7:23:0:23:0,0,299:45,0,255:15,0 chr1 160340729 . C . PASS END=160340729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160340730 . G . LowGQ END=160340730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,7:23:0:23:0,0,406:61,0,255:15,0 chr1 160340731 . C . PASS END=160340732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160340733 . G . PASS END=160340733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 160340734 . C . PASS END=160340737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,795:0,69,255:23,0 chr1 160340738 . A . PASS END=160340739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,656:0,52,255:21,0 chr1 160340740 . A . PASS END=160340740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 160340741 . G . PASS END=160340741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,704:0,58,255:23,0 chr1 160340742 . C . PASS END=160340745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,74,255:24,0 chr1 160340746 . G . PASS END=160340746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,764:0,47,255:21,0 chr1 160340747 . T . PASS END=160340754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,856:0,64,255:24,0 chr1 160340755 . G . PASS END=160340755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,706:0,3,255:19,0 chr1 160340756 . G . PASS END=160340756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,835:0,42,255:20,0 chr1 160340757 . C . PASS END=160340759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 160340760 . A . PASS END=160340760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 160340761 . C . PASS END=160340761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 160340762 . G . PASS END=160340762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,713:0,3,255:20,0 chr1 160340763 . C . PASS END=160340765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 160340766 . C . PASS END=160340766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:19,0 chr1 160340767 . G . LowGQ END=160340767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,592:25,0,255:19,0 chr1 160340768 . C . PASS END=160340769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 160340770 . A . PASS END=160340771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 160340772 . A . PASS END=160340772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:20,0 chr1 160340773 . A . PASS END=160340773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 160340774 . C . PASS END=160340776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,611:0,30,255:19,0 chr1 160340777 . A . PASS END=160340777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160340778 . T . PASS END=160340778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:19,0 chr1 160340779 . C . PASS END=160340779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 160340780 . C . PASS END=160340780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:18,0 chr1 160340781 . G . LowGQ END=160340781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,535:9,0,255:18,0 chr1 160340782 . C . PASS END=160340785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 160340786 . G . PASS END=160340786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160340787 . A . PASS END=160340790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160340791 . C . PASS END=160340791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160340792 . T . PASS END=160340792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,615:0,10,255:20,0 chr1 160340793 . T . PASS END=160340794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 160340795 . A . PASS END=160340795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 160340796 . A . PASS END=160340798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 160340799 . T . PASS END=160340810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,730:0,49,255:20,0 chr1 160340811 . A . PASS END=160340813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160340814 . T . PASS END=160340814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 160340815 . G . PASS END=160340819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160340820 . A . PASS END=160340821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160340822 . C . PASS END=160340822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160340823 . T . PASS END=160340838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,44,255:17,0 chr1 160340839 . C . PASS END=160340859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:35:13:0,35,407:0,35,255:13,0 chr1 160340860 . G . PASS END=160340868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,503:0,42,255:14,0 chr1 160340869 . T . PASS END=160340880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 160340881 . C . PASS END=160340923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,23,255:8,0 chr1 160385628 . A . PASS END=160385638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 160385639 . G . PASS END=160385639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160385640 . T . PASS END=160385642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 160385643 . C . PASS END=160385646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 160385647 . A . PASS END=160385668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:34,0 chr1 160385669 . G . PASS END=160385669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:32,0 chr1 160385670 . G . PASS END=160385698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:33:0,86,1202:0,86,255:35,0 chr1 160385852 . G . PASS END=160385858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 160385859 . C . PASS END=160385859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 160385860 . G . PASS END=160385873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,908:0,61,255:26,0 chr1 160385874 . T . PASS END=160385877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 160385878 . A . PASS END=160385899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,937:0,65,255:26,0 chr1 160385900 . G . PASS END=160385900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 160385901 . G . PASS END=160385901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 160385902 . A . PASS END=160385902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 160385903 . C . PASS END=160385922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,870:0,72,255:25,0 chr1 160385923 . C . PASS END=160385947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 160385948 . T . PASS END=160385948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 160385949 . G . PASS END=160385951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 160385952 . T . PASS END=160385952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 160385953 . C . PASS END=160385968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 160385969 . G . PASS END=160385972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 160388792 . G . PASS END=160388794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr1 160388795 . G . PASS END=160388795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 160388796 . A . PASS END=160388819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,805:0,61,255:26,0 chr1 160388820 . T . PASS END=160388821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:42:27:0,42,876:0,42,255:25,0 chr1 160388822 . G . PASS END=160388844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,911:0,62,255:26,0 chr1 160388845 . C . PASS END=160388846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 160388847 . T . PASS END=160388847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr1 160388848 . C . PASS END=160388852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:31,0 chr1 160388853 . A . PASS END=160388853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 160388854 . T . PASS END=160388872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 160388873 . G . PASS END=160388873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160388874 . C . PASS END=160388875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 160388876 . A . PASS END=160388887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 160388888 . G . PASS END=160388894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 160388895 . T . PASS END=160388915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:21:0,63,770:0,63,255:21,0 chr1 160388916 . A . PASS END=160388916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 160388917 . C . PASS END=160388953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr1 160388954 . T . PASS END=160388954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 160388955 . C . PASS END=160388962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 160388963 . A . PASS END=160389029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,540:0,40,255:19,0 chr1 160389030 . C . PASS END=160389035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 160389036 . A . PASS END=160389036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 160389037 . G . PASS END=160389091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,870:0,62,255:26,0 chr1 160389092 . G . PASS END=160389133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1094:0,84,255:31,0 chr1 160389134 . T . PASS END=160389134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,959:0,76,255:28,0 chr1 160389135 . T . PASS END=160389153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 160389154 . T . PASS END=160389154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 160389155 . A . PASS END=160389183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:34,0 chr1 160389184 . C . PASS END=160389184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:29,2 chr1 160389185 . T . PASS END=160389185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1172:0,36,255:29,2 chr1 160389186 . A . PASS END=160389186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr1 160389187 . C . PASS END=160389190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 160389191 . C . PASS END=160389202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:27:0,69,1035:0,81,255:25,0 chr1 160389203 . G . PASS END=160389203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 160389204 . T . PASS END=160389215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 160389216 . A . PASS END=160389231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1027:0,84,255:29,0 chr1 160389232 . C . PASS END=160389244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:26,0 chr1 160389245 . G . PASS END=160389250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 160389251 . T . PASS END=160389251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:27,0 chr1 160389252 . T . PASS END=160389254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 160389255 . C . PASS END=160389255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 160389256 . C . PASS END=160389296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1186:0,83,255:33,0 chr1 160389297 . C . PASS END=160389307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,80,255:26,0 chr1 160389308 . C . PASS END=160389310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 160389311 . G . PASS END=160389327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 160389328 . G . PASS END=160389384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1149:0,83,255:32,0 chr1 160389385 . C . PASS END=160389386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 160389387 . T . PASS END=160389389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160389390 . G . PASS END=160389390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 160389391 . C . PASS END=160389395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 160389396 . T . PASS END=160389396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 160389397 . C . PASS END=160389397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160389398 . A . PASS END=160389399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 160389735 . T . PASS END=160389735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:30,0 chr1 160389736 . C . PASS END=160389751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1255:0,86,255:33,0 chr1 160389752 . A . PASS END=160389773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1111:0,82,255:33,0 chr1 160389774 . T . PASS END=160389783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,1080:0,66,255:25,0 chr1 160390196 . C . PASS END=160390196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 160390201 . C . PASS END=160390206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:44:0,85,1324:0,85,255:40,0 chr1 160390207 . G . PASS END=160390207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1513:0,69,255:40,0 chr1 160390208 . C . PASS END=160390337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:47:0,111,1674:0,111,255:40,1 chr1 160390842 . A . PASS END=160390940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1072:0,85,255:40,0 chr1 160390941 . C . PASS END=160390952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,74,255:25,0 chr1 160390953 . G . PASS END=160390956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 160390957 . G . PASS END=160390960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:21,0 chr1 160390961 . C . PASS END=160390977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:19:0,45,675:0,49,255:19,0 chr1 160393842 . G . PASS END=160393843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160393844 . T . PASS END=160393845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 160393846 . G . PASS END=160393853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 160393854 . G . PASS END=160393854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 160393855 . G . PASS END=160393867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:33,0 chr1 160393868 . T . PASS END=160393869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 160393870 . A . PASS END=160393870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:30,0 chr1 160393871 . C . PASS END=160393904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:34:0,87,1385:0,87,255:40,0 chr1 160393905 . A G, 49.79 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=2.681;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:7,6,0:14,13,0:48:85,0,50,672,751,1422:255,0,255:21,0:4.9785e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,11,8:11,10,12,7 chr1 160393906 . A . PASS END=160393942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:39:0,83,1191:0,83,255:40,0 chr1 160393943 . A . PASS END=160394067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1078:0,83,255:40,0 chr1 160394068 . C . PASS END=160394073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 160394908 . G . PASS END=160394936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:18,0 chr1 160394937 . A C, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=2.155;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,12,0:0.632,0.000:19:3,7,0:4,5,0:47:85,0,47,421,248,669:255,0,214:6,0:5.0000e+01,8.5683e-05,5.0110e+01,4.2106e+02,2.8267e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,9,3:3,4,6,6 chr1 160394938 . C . PASS END=160394943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 160394944 . A . PASS END=160394988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,908:0,61,255:26,0 chr1 160394989 . G . PASS END=160394997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr1 160394998 . G . PASS END=160394998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 160394999 . A . PASS END=160395002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:33,0 chr1 160395003 . G A, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.951;ReadPosRankSum=2.605;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,18,0:0.529,0.000:34:5,10,0:11,8,0:48:85,0,50,644,535,1179:255,0,255:16,0:5.0000e+01,6.6786e-05,5.2692e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,2,13,5:3,13,13,5 chr1 160395004 . G . PASS END=160395012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1279:0,89,255:36,0 chr1 160395013 . G . PASS END=160395013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:34,0 chr1 160395014 . G . PASS END=160395040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1405:0,104,255:40,0 chr1 160395041 . T . PASS END=160395100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:42:0,96,1527:0,96,255:40,0 chr1 160395101 . C . PASS END=160395101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:40,0 chr1 160395102 . C . PASS END=160395132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:40:0,96,1421:0,96,255:40,0 chr1 160395133 . T . PASS END=160395133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:69:40:0,69,1055:0,69,255:34,0 chr1 160395134 . T . PASS END=160395139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1319:0,95,255:34,0 chr1 160395140 . T . PASS END=160395140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr1 160395141 . G . PASS END=160395141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 160395142 . A . PASS END=160395142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1127:0,36,255:27,0 chr1 160395143 . G . PASS END=160395146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:30,0 chr1 160395147 . G . PASS END=160395151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1080:0,88,255:26,0 chr1 160395152 . C . PASS END=160395152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1157:0,50,255:24,0 chr1 160395153 . T . PASS END=160395153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,85,255:25,0 chr1 160395154 . G . PASS END=160395154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:23,0 chr1 160395155 . A . PASS END=160395158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,900:0,71,255:24,0 chr1 160395159 . C . PASS END=160395159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:19,0 chr1 160395160 . T . PASS END=160395160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:18,0 chr1 160395161 . C . PASS END=160395164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,855:0,42,255:19,0 chr1 160395165 . G . PASS END=160395166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:21,0 chr1 160395167 . G . PASS END=160395168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,894:0,48,255:20,0 chr1 160456497 . T . PASS END=160456544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,129,255:40,0 chr1 160456837 . T . PASS END=160456965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:52:0,120,1800:0,120,255:40,0 chr1 160458878 . C . PASS END=160458960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:97:44:0,97,1398:0,97,255:40,0 chr1 160459988 . C . PASS END=160460026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,115,1800:0,115,255:40,0 chr1 160460365 . C . PASS END=160460475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:55:0,120,1800:0,138,255:40,0 chr1 160460915 . C . PASS END=160460922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 160460923 . A . PASS END=160460923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,481:0,24,255:16,0 chr1 160460924 . G . PASS END=160460924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 160460925 . C . PASS END=160460927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160460928 . C . PASS END=160460930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 160460931 . G . PASS END=160460931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160460932 . G . PASS END=160460932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 160460933 . C . PASS END=160460940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,886:0,63,255:24,0 chr1 160460941 . G . PASS END=160460941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 160460942 . A . PASS END=160460943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 160460944 . A . PASS END=160460944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 160460945 . A . PASS END=160460945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 160460946 . G . PASS END=160460946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 160460947 . G . PASS END=160460947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 160460948 . A . PASS END=160460956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:28,0 chr1 160460957 . T . PASS END=160460957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 160460958 . G . PASS END=160460965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 160460966 . T . PASS END=160460966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 160460967 . C . PASS END=160461141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:30:0,84,1260:0,90,255:40,0 chr1 160461142 . T . PASS END=160461142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:44:46:0,44,1474:0,44,255:40,0 chr1 160461143 . G . PASS END=160461145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,108,1652:0,108,255:40,0 chr1 160461146 . T . PASS END=160461178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:39:0,84,1341:0,84,255:40,0 chr1 160465851 . T . PASS END=160465854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 160465855 . T . PASS END=160465855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 160465856 . A . PASS END=160465862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 160465863 . G . PASS END=160465867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,815:0,66,255:26,0 chr1 160465868 . T . PASS END=160465871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 160465872 . T . PASS END=160465872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 160465873 . G . PASS END=160465876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 160465877 . A . PASS END=160465877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:26,0 chr1 160465878 . G . PASS END=160465900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1080:0,90,255:33,0 chr1 160465901 . A . PASS END=160465901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1108:0,41,255:29,0 chr1 160465902 . T . PASS END=160466173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,890:0,84,255:40,0 chr1 160466174 . A . PASS END=160466174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 160466175 . C . PASS END=160466181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 160466182 . C . PASS END=160466183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 160492934 . C . PASS END=160492982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:66:0,120,1800:0,145,255:40,0 chr1 160516308 . A G, 163.46 PASS DP=39;MQ=248.62;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,25,0:0,14,0:113:201,116,0,1422,116,1422:255,117,0:0,0:1.6346e+02,1.1346e+02,0.0000e+00,4.5000e+02,1.4823e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,20:0,0,17,22 chr1 160518046 . C . PASS END=160518111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:38:0,87,1334:0,87,255:40,0 chr1 160519707 . C . PASS END=160519766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,143,255:40,0 chr1 160519767 . C . PASS END=160519769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,105,1575:0,156,255:39,0 chr1 160520728 . C . PASS END=160520825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:41:0,90,1505:0,90,255:40,0 chr1 160522495 . A . PASS END=160522527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,120,1800:0,129,255:40,0 chr1 160523150 . C . PASS END=160523262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1186:0,87,255:40,0 chr1 160523263 . T . PASS END=160523287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 160523685 . C . PASS END=160523700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,692:0,51,255:19,0 chr1 160523701 . G . PASS END=160523707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 160523708 . A . PASS END=160523708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,613:0,43,255:19,0 chr1 160523709 . T . PASS END=160523717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 160523718 . A . PASS END=160523724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 160523725 . G . PASS END=160523725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160523726 . C . PASS END=160523733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 160523734 . G . PASS END=160523740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,841:0,61,255:25,0 chr1 160523741 . G . PASS END=160523822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1139:0,80,255:35,0 chr1 160523823 . A . PASS END=160523823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr1 160523824 . A . PASS END=160523838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1066:0,80,255:31,0 chr1 160523839 . C . PASS END=160523839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr1 160523840 . T . PASS END=160523887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1183:0,83,255:34,0 chr1 160523888 . T . PASS END=160523888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1124:0,60,255:29,0 chr1 160523889 . T . PASS END=160523922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1078:0,83,255:32,0 chr1 160523923 . T . PASS END=160523936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 160535194 . G . PASS END=160535201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 160535202 . T . PASS END=160535207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 160535208 . T . PASS END=160535225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:26,0 chr1 160535226 . G . PASS END=160535524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1116:0,83,255:40,0 chr1 160535525 . T . PASS END=160535525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr1 160535526 . G . PASS END=160535535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 160549182 . A . PASS END=160549227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,99,1485:0,103,255:40,0 chr1 160580067 . T . PASS END=160580132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,135,255:40,0 chr1 160580538 . T . PASS END=160580588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,111,1474:0,117,255:40,0 chr1 160582278 . C . PASS END=160582285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1119:0,80,255:32,0 chr1 160582286 . A . PASS END=160582287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 160582288 . T . PASS END=160582288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 160582289 . C . PASS END=160582294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1194:0,93,255:31,0 chr1 160582295 . C . PASS END=160582295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 160582296 . A . PASS END=160582309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 160582310 . C . PASS END=160582310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:33,0 chr1 160582311 . A . PASS END=160582347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:33,0 chr1 160582348 . G . PASS END=160582350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 160582351 . T . PASS END=160582363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 160582364 . G . PASS END=160582370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 160589566 . A . PASS END=160589639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,132,255:40,1 chr1 160593293 . C . PASS END=160593375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,123,255:40,0 chr1 160593886 . C . PASS END=160593975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:34:0,96,1440:0,102,255:40,0 chr1 160604403 . C . PASS END=160604407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 160604408 . G . PASS END=160604408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 160604409 . G . PASS END=160604435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,861:0,64,255:26,0 chr1 160604436 . T . PASS END=160604447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 160604448 . A . PASS END=160604448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:23,0 chr1 160604449 . A . PASS END=160604450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:24,0 chr1 160604451 . T . PASS END=160604451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr1 160604452 . G . PASS END=160604455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 160604456 . C . PASS END=160604456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 160604457 . T . PASS END=160604458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 160604459 . A . PASS END=160604459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 160604460 . T . PASS END=160604467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1030:0,68,255:25,0 chr1 160604468 . C . PASS END=160604470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160604471 . A . PASS END=160604471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 160604472 . C . PASS END=160604472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160604473 . G A, 49.62 PASS DP=28;MQ=249.18;MQRankSum=3.777;ReadPosRankSum=2.764;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,13,0:0.464,0.000:28:6,4,0:9,9,0:48:84,0,50,435,529,964:255,0,255:15,0:4.9620e+01,6.9116e-05,5.3000e+01,4.3531e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,6,7:8,7,5,8 chr1 160604474 . G . PASS END=160604476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:32,0 chr1 160604477 . C . PASS END=160604478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,979:0,63,255:31,0 chr1 160604479 . G . PASS END=160604505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1164:0,83,255:34,0 chr1 160604506 . G . PASS END=160604506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 160604507 . C . PASS END=160604510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 160604511 . G . PASS END=160604636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1163:0,81,255:38,0 chr1 160604637 . C . PASS END=160604676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:25,0 chr1 160604677 . G . PASS END=160604687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,690:0,46,255:19,0 chr1 160606981 . C . PASS END=160607006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,740:0,63,255:26,0 chr1 160607007 . C . PASS END=160607008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 160607009 . C . PASS END=160607010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 160607011 . G . PASS END=160607011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 160607012 . A . PASS END=160607012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 160607013 . A . PASS END=160607014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1032:0,87,255:29,0 chr1 160607015 . T . PASS END=160607015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 160607016 . G . PASS END=160607016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 160607017 . A . PASS END=160607017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 160607018 . A . PASS END=160607021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 160607022 . T . PASS END=160607022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr1 160607023 . T . PASS END=160607292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1155:0,80,255:40,0 chr1 160607293 . T . PASS END=160607293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr1 160607294 . C . PASS END=160607301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 160607302 . A . PASS END=160607310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 160607311 . T . PASS END=160607311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:23,0 chr1 160607312 . G . PASS END=160607316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,1014:0,68,255:24,0 chr1 160607317 . C . PASS END=160607319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 160616660 . C . PASS END=160616735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:37:0,93,1441:0,93,255:40,0 chr1 160648842 . T . PASS END=160648921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,101,1403:0,101,255:40,0 chr1 160650885 . T . PASS END=160650887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 160650888 . C . PASS END=160650912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,576:0,40,255:19,0 chr1 160650913 . A G, 100.72 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,9,0:0,9,0:51:138,54,0,669,54,669:255,54,0:0,0:1.0072e+02,5.0717e+01,3.6758e-05,4.5000e+02,8.5487e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,7:0,0,6,12 chr1 160650914 . T . PASS END=160650925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr1 160650926 . C . PASS END=160650928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 160650929 . T . PASS END=160650930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr1 160650931 . C . PASS END=160650943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:22,0 chr1 160650944 . A . PASS END=160650950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 160650951 . G . PASS END=160650954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 160650955 . C . PASS END=160650957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 160650958 . T . PASS END=160650958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 160650959 . G . PASS END=160650968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:23,0 chr1 160650969 . C . PASS END=160650969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr1 160650970 . A . PASS END=160650972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 160650973 . T . PASS END=160650973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 160650974 . C . PASS END=160650981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:23,0 chr1 160650982 . T . PASS END=160650984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 160650985 . T . PASS END=160650991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 160650992 . C . PASS END=160650993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:15,0 chr1 160650994 . A . PASS END=160650994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:15,0 chr1 160650995 . G . PASS END=160650996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:17,0 chr1 160650997 . G . PASS END=160651006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,962:0,78,255:26,0 chr1 160651007 . G . PASS END=160651007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 160651008 . A . PASS END=160651010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,955:0,78,255:26,0 chr1 160651011 . G . PASS END=160651049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:35,0 chr1 160651050 . G . PASS END=160651050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:34,0 chr1 160651051 . A . PASS END=160651087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:92:35:0,92,1169:0,92,255:39,0 chr1 160651088 . T . PASS END=160651088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1388:0,73,255:37,0 chr1 160651089 . A . PASS END=160651167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:34:0,84,1264:0,84,255:40,0 chr1 160651168 . T . PASS END=160651168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:28,0 chr1 160651169 . C . PASS END=160651178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:31,0 chr1 160651179 . C . PASS END=160651179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 160651180 . A . PASS END=160651196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1129:0,80,255:32,0 chr1 160651197 . A . PASS END=160651197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1078:0,47,255:30,0 chr1 160651198 . T . PASS END=160651220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1158:0,83,255:30,0 chr1 160651221 . T . PASS END=160651221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:27,0 chr1 160651222 . A . PASS END=160651225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 160651226 . T . PASS END=160651227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:28,0 chr1 160651228 . T . PASS END=160651228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160651229 . C . PASS END=160651252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:26,0 chr1 160651253 . C . PASS END=160651258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:22:0,54,810:0,59,255:18,0 chr1 160654552 . T . PASS END=160654573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:13,0 chr1 160654574 . C . PASS END=160654587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:18,0 chr1 160654588 . G . PASS END=160654589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr1 160654590 . G . PASS END=160654602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:19,0 chr1 160654603 . C . PASS END=160654603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 160654604 . T . PASS END=160654612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 160654613 . G . PASS END=160654613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160654614 . C . PASS END=160654958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:29:0,81,1215:0,87,255:40,0 chr1 160654959 . C . PASS END=160654968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:26,0 chr1 160654969 . T . PASS END=160654979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:18,0 chr1 160681472 . C . PASS END=160681553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,111,1665:0,115,255:40,0 chr1 160709092 . A . PASS END=160709146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:48:0,104,1800:0,104,255:40,0 chr1 160717984 . G . PASS END=160717990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 160717991 . A . PASS END=160717991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 160717992 . G . PASS END=160717992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 160717993 . C . PASS END=160718202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:28:0,84,1055:0,84,255:40,0 chr1 160718203 . T . PASS END=160718204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 160718205 . A . PASS END=160718209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 160718210 . A . PASS END=160718210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,953:0,79,255:30,0 chr1 160718211 . C . PASS END=160718234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 160718235 . T . PASS END=160718242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 160718243 . G . PASS END=160718243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 160718244 . G . PASS END=160718259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:22,0 chr1 160718260 . C . PASS END=160718261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 160718262 . C . PASS END=160718266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 160718267 . G . PASS END=160718279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 160718280 . C . PASS END=160718289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 160718290 . T . LowGQ END=160718292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:14:0,0,390:0,0,255:13,2 chr1 160718293 . T . PASS END=160718295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 160718296 . A . PASS END=160718304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 160719611 . A . PASS END=160719634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,862:0,66,255:25,0 chr1 160719635 . C . PASS END=160719649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,942:0,80,255:31,0 chr1 160719650 . G . PASS END=160719650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 160719651 . C . PASS END=160719653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1135:0,80,255:32,0 chr1 160719654 . T . PASS END=160719655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1034:0,65,255:31,0 chr1 160719656 . A . PASS END=160719674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1098:0,80,255:34,0 chr1 160719675 . C . PASS END=160719675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:29,0 chr1 160719676 . A . PASS END=160719679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1195:0,88,255:32,0 chr1 160719680 . T . PASS END=160719680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:32,0 chr1 160719681 . G . PASS END=160719689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:36:0,94,1244:0,94,255:34,0 chr1 160719690 . C . PASS END=160719690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:31,0 chr1 160719691 . A . PASS END=160719779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:32:0,81,1119:0,81,255:37,0 chr1 160719780 . C . PASS END=160719780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:32,0 chr1 160719781 . T . PASS END=160720213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:36:0,90,1261:0,94,255:40,1 chr1 160721135 . A . PASS END=160721238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:41:0,90,1350:0,113,255:40,0 chr1 160721976 . A . PASS END=160722026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,165,255:40,0 chr1 160722027 . A . PASS END=160722038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,137,255:40,0 chr1 160722896 . A . PASS END=160722967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,153,255:40,0 chr1 160765978 . A . PASS END=160766098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1208:0,83,255:40,0 chr1 160766099 . T . PASS END=160766101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 160766900 . G . PASS END=160766906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:24,0 chr1 160766907 . T . PASS END=160766907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 160766908 . C . PASS END=160766920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,795:0,72,255:24,0 chr1 160766921 . T . PASS END=160766922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 160766923 . T . PASS END=160766923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 160766924 . C . PASS END=160766953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:34,0 chr1 160766954 . G . PASS END=160766954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:31,0 chr1 160766955 . C . PASS END=160767022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1249:0,89,255:37,0 chr1 160767023 . C . PASS END=160767054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:33,0 chr1 160767055 . T . PASS END=160767059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 160767060 . G A, 39.59 PASS DP=28;MQ=248.68;MQRankSum=3.777;ReadPosRankSum=2.810;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,13,0:0.464,0.000:28:10,6,0:5,7,0:39:74,0,50,399,536,936:255,0,255:13,0:3.9593e+01,4.9885e-04,5.3000e+01,3.9940e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,2,11:6,9,7,6 chr1 160767061 . T . PASS END=160767065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr1 160768616 . A . PASS END=160768628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 160768629 . G . PASS END=160768632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 160768633 . G . PASS END=160768634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 160768635 . G . PASS END=160768669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,235:8,0 chr1 160768670 . A . PASS END=160768670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr1 160768671 . A . PASS END=160768672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 160768673 . T . PASS END=160768679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,243:6,0 chr1 160768680 . C . PASS END=160768687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 160768688 . C . PASS END=160768707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 160768708 . A . PASS END=160768719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 160769476 . A . PASS END=160769853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1090:0,85,255:40,0 chr1 160769854 . T . PASS END=160769854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:25,0 chr1 160769855 . T . PASS END=160769856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 160769857 . A . PASS END=160769864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,84,255:26,0 chr1 160769865 . C . PASS END=160769872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:24:0,51,765:0,62,255:18,0 chr1 160771580 . C . PASS END=160771586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,699:0,63,255:21,0 chr1 160771587 . T . PASS END=160771587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 160771588 . A . PASS END=160771608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:24,0 chr1 160771609 . G . PASS END=160771609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 160771610 . T . PASS END=160771625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr1 160771626 . C . PASS END=160771630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 160771631 . C . PASS END=160771632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,73,255:24,0 chr1 160771633 . C . PASS END=160771637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160771638 . G . PASS END=160771638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 160771639 . G . PASS END=160771640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 160771641 . G . PASS END=160771641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 160771642 . G . PASS END=160771643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 160771644 . C . PASS END=160771669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,937:0,64,255:26,0 chr1 160771670 . C . PASS END=160771670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 160771671 . C . PASS END=160771676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 160771677 . T . PASS END=160771677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 160771678 . G . PASS END=160771679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160771680 . G . PASS END=160771699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr1 160771700 . A . PASS END=160771707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 160783426 . A . PASS END=160783426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,824:0,37,255:24,0 chr1 160783427 . G . PASS END=160783428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1037:0,71,255:27,0 chr1 160783429 . A . PASS END=160783445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1048:0,87,255:30,0 chr1 160783446 . G . PASS END=160783447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 160783448 . C . PASS END=160783448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 160783449 . A . PASS END=160783449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr1 160783450 . C . PASS END=160783452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 160783453 . T . PASS END=160783455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:29,0 chr1 160783456 . A . PASS END=160783484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1203:0,83,255:33,0 chr1 160783485 . T . PASS END=160783485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1122:0,30,255:29,0 chr1 160783486 . G . PASS END=160783687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1215:0,86,255:40,0 chr1 160783688 . G . PASS END=160783701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:25,0 chr1 160784210 . A . PASS END=160784215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:16,0 chr1 160784216 . G . PASS END=160784216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 160784217 . A . PASS END=160784225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 160784226 . A . PASS END=160784226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 160784227 . G . PASS END=160784234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 160784235 . A . PASS END=160784235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 160784236 . A . PASS END=160784237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 160784238 . G . PASS END=160784242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 160784243 . A . PASS END=160784243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 160784244 . G . PASS END=160784247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,724:0,63,255:22,0 chr1 160784248 . G . PASS END=160784257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:31,0 chr1 160784258 . T . PASS END=160784259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 160784260 . C . PASS END=160784266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:32,0 chr1 160784267 . A . PASS END=160784267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr1 160784268 . G . PASS END=160784343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1188:0,83,255:36,0 chr1 160784344 . A . PASS END=160784344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr1 160784345 . T . PASS END=160784379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1196:0,85,255:34,0 chr1 160784380 . C . PASS END=160784380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:30,0 chr1 160784381 . C . PASS END=160784398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1210:0,86,255:32,0 chr1 160784399 . A . PASS END=160784399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1178:0,36,255:32,0 chr1 160784400 . T . PASS END=160784422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1172:0,83,255:31,0 chr1 160784423 . T . PASS END=160784423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1038:0,54,255:27,0 chr1 160784424 . C . PASS END=160784424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 160784425 . T . PASS END=160784425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr1 160784426 . C . PASS END=160784427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1094:0,77,255:26,0 chr1 160784428 . A . PASS END=160784446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 160784447 . A . PASS END=160784447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 160784448 . G . PASS END=160784541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:35,0 chr1 160784542 . C . PASS END=160784551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 160786384 . G . PASS END=160786386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 160786387 . G . PASS END=160786389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 160786390 . T . PASS END=160786390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 160786391 . G . PASS END=160786391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr1 160786392 . A . PASS END=160786393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 160786394 . G . PASS END=160786394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 160786395 . A . PASS END=160786396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 160786397 . G . PASS END=160786397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 160786398 . C . PASS END=160786398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 160786399 . C . PASS END=160786399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:20,0 chr1 160786400 . C . PASS END=160786404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,740:0,66,255:22,0 chr1 160786405 . T . PASS END=160786405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 160786406 . C . PASS END=160786408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 160786409 . G . PASS END=160786410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 160786411 . G . PASS END=160786417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 160786418 . C . PASS END=160786418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 160786419 . A . PASS END=160786443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,878:0,72,255:24,0 chr1 160786444 . G . PASS END=160786471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:37,0 chr1 160786472 . C . PASS END=160786472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:34,0 chr1 160786473 . G . PASS END=160786606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:37:0,99,1352:0,100,255:40,0 chr1 160786607 . T . PASS END=160786607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:32,0 chr1 160786608 . G . PASS END=160786624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,101,255:32,0 chr1 160786625 . C . PASS END=160786628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:32:0,78,1170:0,80,255:26,0 chr1 160786629 . T . PASS END=160786632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 160786633 . T . PASS END=160786653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1111:0,82,255:30,0 chr1 160788008 . G . PASS END=160788109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:39:0,80,1107:0,80,255:40,0 chr1 160789111 . G . PASS END=160789158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,117,1798:0,117,255:40,0 chr1 160789159 . C . PASS END=160789164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,134,255:40,0 chr1 160793255 . A . PASS END=160793263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr1 160793264 . C . PASS END=160793272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:25,0 chr1 160793273 . C . PASS END=160793336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1094:0,87,255:34,0 chr1 160793337 . A . PASS END=160793349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:26:0,75,1125:0,78,255:26,0 chr1 160793350 . A . PASS END=160793355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160793356 . G . PASS END=160793357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 160793358 . C . PASS END=160793557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:30:0,83,1193:0,83,255:40,0 chr1 160793558 . C . PASS END=160793576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,945:0,67,255:26,0 chr1 160793577 . C . PASS END=160793577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 160793578 . A . PASS END=160793578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 160793579 . A . PASS END=160793586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,56,255:19,0 chr1 160793971 . G . PASS END=160794135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,108,1584:0,116,255:40,0 chr1 160797538 . G . PASS END=160797606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,123,255:40,0 chr1 160801137 . C . PASS END=160801209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,99,1485:0,115,255:40,0 chr1 160801210 . T . PASS END=160801210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,0 chr1 160801211 . T . PASS END=160801211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 160801212 . T . PASS END=160801213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:34,0 chr1 160801214 . C . PASS END=160801217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:34,0 chr1 160802309 . C . PASS END=160802365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,105,1800:0,105,255:40,2 chr1 160802480 . T . PASS END=160802509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,125,255:40,0 chr1 160803841 . C . PASS END=160803902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:39:0,81,1215:0,117,255:40,0 chr1 160803903 . A . PASS END=160803904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:38:0,78,1170:0,101,255:26,0 chr1 160803905 . G . PASS END=160803906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1215:0,98,255:27,0 chr1 160805985 . C . PASS END=160806044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,157,255:40,2 chr1 160807715 . T C, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=1.932;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,8,0:0.667,0.000:12:4,2,0:0,6,0:35:85,0,32,278,143,421:255,0,119:3,0:5.0001e+01,1.4341e-03,3.4946e+01,2.7798e+02,1.7787e+02,4.2408e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,4,6,2:0,4,2,6 chr1 160808241 . G . PASS END=160808308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,105,1575:0,112,255:40,0 chr1 160808729 . C . PASS END=160808738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1168:0,91,255:34,0 chr1 160808739 . C . PASS END=160808739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1105:0,75,255:33,0 chr1 160808740 . T . PASS END=160808817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:36:0,103,1316:0,103,255:40,2 chr1 160808818 . A . PASS END=160808818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1651:0,72,255:40,2 chr1 160808819 . A . PASS END=160808839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:43:0,111,1665:0,121,255:40,0 chr1 160811000 . C . PASS END=160811012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:26,0 chr1 160811013 . C . PASS END=160811017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 160811018 . A . PASS END=160811018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 160811019 . G . PASS END=160811021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160811022 . C . PASS END=160811023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 160811024 . G . PASS END=160811049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1156:0,83,255:35,0 chr1 160811050 . C . PASS END=160811050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 160811051 . A . PASS END=160811164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1209:0,81,255:40,0 chr1 160811165 . A . PASS END=160811193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 160811194 . A . PASS END=160811194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:20,0 chr1 160811195 . C . PASS END=160811196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:21,0 chr1 160811197 . A . PASS END=160811197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 160811198 . A . PASS END=160811210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,809:0,66,255:23,0 chr1 160811211 . C . PASS END=160811211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 160811212 . A . PASS END=160811213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 160811214 . T . PASS END=160811214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,766:0,39,255:22,0 chr1 160811215 . T . PASS END=160811240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,864:0,64,255:25,0 chr1 160811241 . C . PASS END=160811241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:20,0 chr1 160811242 . C . PASS END=160811244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 160811245 . T . PASS END=160811245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 160811246 . G . PASS END=160811259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 160811260 . G . PASS END=160811285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,607:0,47,255:19,0 chr1 160811286 . A . PASS END=160811286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,599:0,26,255:17,0 chr1 160811287 . G . PASS END=160811287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 160811288 . A . PASS END=160811288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr1 160811289 . T . PASS END=160811290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 160811374 . C . PASS END=160811380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,909:0,78,255:26,0 chr1 160811381 . A . PASS END=160811384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160811385 . A . PASS END=160811385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,885:0,67,255:26,0 chr1 160811386 . C . PASS END=160811414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1011:0,80,255:32,0 chr1 160811415 . G . PASS END=160811415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:30,0 chr1 160811416 . A . PASS END=160811689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1151:0,80,255:40,0 chr1 160811690 . T . PASS END=160811691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 160832407 . C . PASS END=160832467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,864:0,61,255:26,0 chr1 160846454 . T . PASS END=160846454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 160846455 . C . PASS END=160846455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 160846456 . A . PASS END=160846456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 160846457 . A . PASS END=160846457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 160846458 . C . PASS END=160846463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:25,0 chr1 160846464 . A . PASS END=160846464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 160846465 . A . PASS END=160846469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 160846470 . A . PASS END=160846488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 160846489 . T . PASS END=160846489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:27,0 chr1 160846490 . C . PASS END=160846550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1025:0,80,255:36,0 chr1 160846551 . T . PASS END=160846552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1153:0,72,255:32,0 chr1 160846553 . T . PASS END=160846553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1255:0,56,255:32,0 chr1 160846554 . C . PASS END=160846556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:33,0 chr1 160846557 . C . PASS END=160846585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 160846586 . T . PASS END=160846586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 160846587 . C . PASS END=160846587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 160846588 . C . PASS END=160846601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:19:0,44,704:0,44,255:19,0 chr1 160846602 . C . PASS END=160846606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 160849101 . G . PASS END=160849119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,111,1681:0,111,255:40,0 chr1 160849120 . G . PASS END=160849204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,117,1651:0,117,255:40,0 chr1 160850378 . G . PASS END=160850457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:32:0,93,1097:0,95,255:40,0 chr1 160850458 . T . PASS END=160850474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,945:0,78,255:26,0 chr1 160850475 . T . PASS END=160850475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 160850476 . T . PASS END=160850477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 160850478 . T . PASS END=160850478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 160850479 . C . PASS END=160850491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 160850492 . G . PASS END=160850498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 160850944 . C . PASS END=160850953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 160850954 . C . PASS END=160850954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 160850955 . C . PASS END=160850973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,446:0,45,255:18,0 chr1 160850974 . T . PASS END=160850995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 160850996 . G . PASS END=160851008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:23,0 chr1 160851009 . G . PASS END=160851009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 160851010 . C . PASS END=160851021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:25,0 chr1 160851022 . T . PASS END=160851022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 160851023 . C . PASS END=160851027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:26,0 chr1 160851028 . G . PASS END=160851028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 160851029 . T . PASS END=160851033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 160851034 . C . PASS END=160851037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 160851038 . G . PASS END=160851102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,884:0,62,255:26,0 chr1 160851747 . C . PASS END=160851753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 160851754 . T . PASS END=160851754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 160851755 . C . PASS END=160851760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 160851761 . T . PASS END=160851761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 160851762 . C . PASS END=160851788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1121:0,87,255:32,0 chr1 160851789 . G . PASS END=160851810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1324:0,92,255:35,0 chr1 160851811 . T . PASS END=160851811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:33,0 chr1 160851812 . C . PASS END=160851825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1304:0,92,255:35,0 chr1 160851826 . A T, 155.69 PASS DP=37;MQ=109.30;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,17,0:0,20,0:107:193,110,0,1375,110,1375:255,111,0:0,0:1.5569e+02,1.0744e+02,0.0000e+00,4.5000e+02,1.4221e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,20:0,0,19,18 chr1 160851827 . C . PASS END=160851872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:34,0 chr1 160851873 . C . PASS END=160851874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:34:0,78,1170:0,89,255:26,0 chr1 160851875 . T . PASS END=160851885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:29,0 chr1 160851886 . T . PASS END=160851893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 160851894 . G A, 132.12 PASS DP=29;MQ=106.86;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:84:170,87,0,1100,87,1100:255,87,0:0,0:1.3212e+02,8.4273e+01,0.0000e+00,4.5000e+02,1.1904e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,19:0,0,18,11 chr1 160851895 . T . PASS END=160851919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,68,255:26,0 chr1 160851920 . C . PASS END=160851920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 160851921 . G . PASS END=160851926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:26,0 chr1 160851927 . C . PASS END=160851928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 160851929 . C . PASS END=160851931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160851932 . A . PASS END=160851938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:29,0 chr1 160851939 . G . PASS END=160851939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 160851940 . T . PASS END=160851953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:28,0 chr1 160851954 . G . PASS END=160851984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,963:0,67,255:26,0 chr1 160851985 . T . PASS END=160851993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr1 160851994 . T . PASS END=160851994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 160853218 . C . PASS END=160853312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:39:0,93,1396:0,93,255:40,0 chr1 160853313 . T . PASS END=160853313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1355:0,71,255:32,0 chr1 160853314 . C . PASS END=160853316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:96:40:0,96,1440:0,103,255:33,0 chr1 160854610 . C . PASS END=160854667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,111,1532:0,111,255:40,0 chr1 160914930 . T . PASS END=160914944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,754:0,60,255:25,0 chr1 160914945 . G . PASS END=160914946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 160914947 . G . PASS END=160914947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 160914948 . T . PASS END=160914948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 160914949 . A . PASS END=160914949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 160914950 . C . PASS END=160914951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 160914952 . G . PASS END=160914952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160914953 . C . PASS END=160914982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1044:0,80,255:33,0 chr1 160914983 . T . PASS END=160914983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,997:0,46,255:31,0 chr1 160914984 . C . PASS END=160914986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1150:0,85,255:33,0 chr1 160914987 . A . PASS END=160914987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1193:0,55,255:31,0 chr1 160914988 . A . PASS END=160915024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1195:0,86,255:34,0 chr1 160915025 . A . PASS END=160915025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:30,0 chr1 160915026 . G . PASS END=160915039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1257:0,89,255:33,0 chr1 160915040 . G . PASS END=160915042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 160915043 . G . PASS END=160915044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,98,255:27,0 chr1 160915045 . T . PASS END=160915059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 160915060 . A . PASS END=160915081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,675:0,43,255:19,0 chr1 160915082 . G . PASS END=160915082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:16,0 chr1 160917719 . A . PASS END=160917822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:88:33:0,88,1395:0,88,255:40,0 chr1 160919836 . G . PASS END=160919836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 160919837 . T . PASS END=160919837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1156:0,75,255:33,0 chr1 160919838 . T . PASS END=160919956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1260:0,96,255:40,0 chr1 160920343 . C . PASS END=160920362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,604:0,60,255:21,0 chr1 160920363 . T . PASS END=160920363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 160920364 . A . PASS END=160920366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 160920367 . T . PASS END=160920367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 160920368 . C . PASS END=160920394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,762:0,62,255:26,0 chr1 160920395 . G . PASS END=160920403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1124:0,87,255:29,0 chr1 160920404 . C . PASS END=160920404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 160920405 . T . PASS END=160920406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 160920407 . A . PASS END=160920407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,953:0,40,255:23,0 chr1 160920408 . G . PASS END=160920410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 160920411 . G . PASS END=160920418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 160920419 . T . PASS END=160920421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 160920422 . C . PASS END=160920424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 160920425 . C . PASS END=160920433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 160920434 . A . PASS END=160920434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:24,0 chr1 160920435 . T . PASS END=160920449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:25,0 chr1 160920450 . G . PASS END=160920460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 160920461 . A . PASS END=160920501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,847:0,65,255:25,0 chr1 160920833 . C . PASS END=160920853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,119,1643:0,119,255:40,0 chr1 160920854 . C . PASS END=160920928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,110,1700:0,110,255:40,0 chr1 160920929 . C . PASS END=160920965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1395:0,111,255:40,0 chr1 160920966 . C T, 156.61 PASS DP=37;MQ=127.40;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,23,0:0,14,0:108:194,111,0,1434,111,1434:255,111,0:0,0:1.5661e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,19:0,0,20,17 chr1 160920967 . G . PASS END=160920975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1208:0,83,255:31,0 chr1 160920976 . T . PASS END=160920976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1020:0,60,255:27,0 chr1 160920977 . C . PASS END=160921003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 160921004 . G . PASS END=160921006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 160921007 . G . PASS END=160921008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 160921009 . C . PASS END=160921016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 160921017 . G . PASS END=160921018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 160921019 . A . PASS END=160921020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 160921021 . T . PASS END=160921021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 160921022 . C . PASS END=160921022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 160921023 . A . PASS END=160921031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,972:0,70,255:27,0 chr1 160921032 . A . PASS END=160921032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:24,0 chr1 160921033 . A . PASS END=160921052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 160921053 . T . PASS END=160921053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:19,0 chr1 160921054 . T . PASS END=160921058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 160921059 . G . PASS END=160921059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 160921060 . T . PASS END=160921062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 160921063 . G . PASS END=160921077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:17:0,46,706:0,46,255:17,0 chr1 160921078 . C . PASS END=160921080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 160922410 . C . PASS END=160922414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:34,0 chr1 160922415 . G . PASS END=160922415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:35,0 chr1 160922416 . C . PASS END=160922453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:42:0,82,1443:0,82,255:40,0 chr1 160922454 . G . PASS END=160922454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:76:49:0,76,1688:0,76,255:40,0 chr1 160922455 . G . PASS END=160922523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,114,1517:0,114,255:40,0 chr1 160924177 . C . PASS END=160924240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,99,1465:0,104,255:40,0 chr1 160924517 . C . PASS END=160924531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,118,1800:0,118,255:40,0 chr1 160968661 . T . PASS END=160968696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,131,255:40,0 chr1 160968833 . T . PASS END=160968881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:42:0,81,1330:0,81,255:40,0 chr1 160969186 . C . PASS END=160969267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:39:0,87,1410:0,87,255:40,0 chr1 160969430 . T . PASS END=160969537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,129,255:40,0 chr1 160969666 . C . PASS END=160969768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:35:0,88,1219:0,88,255:40,0 chr1 160969936 . C . PASS END=160969937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1258:0,105,255:35,0 chr1 160969938 . G . PASS END=160969938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:34,0 chr1 160969939 . C . PASS END=160969967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:34:0,88,1199:0,88,255:35,0 chr1 160969968 . A . PASS END=160969985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 160969986 . G . PASS END=160969986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 160969987 . G . PASS END=160969995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 160969996 . G . PASS END=160969996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 160969997 . G . PASS END=160970115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1103:0,83,255:35,0 chr1 160970116 . A . PASS END=160970116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 160970117 . A . PASS END=160970125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 160970126 . T . PASS END=160970129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 160970130 . A . PASS END=160970136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 160970137 . C . PASS END=160970138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 160970421 . C . PASS END=160970567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:36:0,90,1313:0,90,255:40,0 chr1 160970810 . C . PASS END=160970917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:40:0,90,1335:0,97,255:40,0 chr1 160971075 . G . PASS END=160971106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:38:0,97,1305:0,97,255:40,0 chr1 160971107 . G . PASS END=160971130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:32:0,96,1225:0,96,255:40,0 chr1 160971131 . A . PASS END=160971131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:31,0 chr1 160971132 . A . PASS END=160971143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1202:0,96,255:32,0 chr1 160990800 . A . PASS END=160990863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:36:0,96,1380:0,96,255:40,0 chr1 160991180 . T . PASS END=160991277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:38:0,87,1305:0,93,255:40,0 chr1 161007565 . C . PASS END=161007573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:25,0 chr1 161007574 . T . PASS END=161007574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 161007575 . T . PASS END=161007589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,828:0,62,255:26,0 chr1 161007590 . C . PASS END=161007590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161007591 . T . PASS END=161007591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 161007592 . A . PASS END=161007616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1094:0,80,255:32,0 chr1 161007669 . T . PASS END=161007677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr1 161007678 . A . PASS END=161007678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:21,0 chr1 161007679 . G . PASS END=161007694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:26,0 chr1 161007695 . C . PASS END=161007705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,86,255:32,0 chr1 161007706 . G . PASS END=161007706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 161007707 . T . PASS END=161007742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:31,0 chr1 161007743 . G . PASS END=161007773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:26,0 chr1 161007774 . G . PASS END=161007774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 161007775 . A . PASS END=161007780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr1 161007781 . T . PASS END=161007781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr1 161007782 . C . PASS END=161007799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:25,0 chr1 161007800 . T . PASS END=161007800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:24,0 chr1 161007801 . C . PASS END=161007822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,840:0,61,255:25,0 chr1 161007823 . A . PASS END=161007823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:22,0 chr1 161007824 . A . PASS END=161007834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 161007835 . T . PASS END=161007846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:19,0 chr1 161007847 . G . PASS END=161007858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,504:0,31,255:13,0 chr1 161007859 . T . PASS END=161007859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 161007860 . C . PASS END=161007865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 161008341 . C . PASS END=161008341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 161008342 . C . PASS END=161008350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr1 161008351 . G . PASS END=161008351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 161008352 . A . PASS END=161008352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 161008353 . G . PASS END=161008353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 161008354 . C . PASS END=161008355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 161008356 . C . PASS END=161008484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1335:0,87,255:40,0 chr1 161008670 . C . PASS END=161008679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1125:0,80,255:30,0 chr1 161009523 . G A, 36.12 PASS DP=27;MQ=250.00;MQRankSum=3.845;ReadPosRankSum=0.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,7,0:0.259,0.000:27:9,5,0:11,2,0:36:71,0,50,250,686,937:190,0,255:19,0:3.6122e+01,1.0827e-03,5.3001e+01,2.5012e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,3,4:7,13,5,2 chr1 161009710 . T . PASS END=161009799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,110,1474:0,110,255:40,0 chr1 161009992 . C . PASS END=161010102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:33:0,84,1260:0,99,255:40,0 chr1 161010103 . T . PASS END=161010109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,80,255:26,0 chr1 161010110 . C . PASS END=161010120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:25:0,57,855:0,64,255:19,0 chr1 161010366 . C . PASS END=161010367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161010368 . G . PASS END=161010377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:22,0 chr1 161010378 . G . PASS END=161010378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 161010379 . G . PASS END=161010380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 161010381 . G . PASS END=161010381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 161010382 . C . PASS END=161010382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 161010383 . T . PASS END=161010383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr1 161010384 . C . PASS END=161010385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 161010386 . C . PASS END=161010388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 161010389 . T . PASS END=161010389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:30,0 chr1 161010390 . A . PASS END=161010460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:32:0,83,1233:0,83,255:39,0 chr1 161010604 . C . PASS END=161010662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1388:0,101,255:39,0 chr1 161011114 . G . PASS END=161011201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:45:0,81,1800:0,81,255:40,0 chr1 161011441 . C . PASS END=161011458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:23,0 chr1 161011459 . C . PASS END=161011459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 161011460 . C . PASS END=161011460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 161011461 . T . PASS END=161011461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 161011462 . G . PASS END=161011462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:22,0 chr1 161011463 . C . PASS END=161011464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161011465 . C . PASS END=161011465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 161011466 . C . PASS END=161011471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161011472 . T . PASS END=161011472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 161011473 . G . PASS END=161011477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:24,0 chr1 161011478 . T . PASS END=161011478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 161011479 . G . PASS END=161011485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 161011486 . G . PASS END=161011486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161011487 . G . PASS END=161011490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 161011491 . G . PASS END=161011491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161011492 . T . PASS END=161011497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 161011498 . C . PASS END=161011501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 161011502 . A . PASS END=161011502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 161011503 . G . PASS END=161011503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:28,0 chr1 161011504 . C . PASS END=161011615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1125:0,83,255:36,0 chr1 161011616 . G . PASS END=161011625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:30:0,66,990:0,80,255:26,0 chr1 161011626 . T . PASS END=161011626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:22,0 chr1 161011627 . G . PASS END=161011630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:23,0 chr1 161011631 . C . PASS END=161011634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 161011635 . G . PASS END=161011635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:18,0 chr1 161011636 . C . PASS END=161011636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 161011906 . C . PASS END=161011910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,671:0,63,255:22,0 chr1 161011911 . T . PASS END=161011911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 161011912 . C . PASS END=161011916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 161011917 . A . PASS END=161011917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 161011918 . T . PASS END=161011918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 161011919 . T . PASS END=161011919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 161011920 . G . PASS END=161011923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 161011924 . G . PASS END=161011924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 161011925 . G . PASS END=161011933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 161011934 . C . PASS END=161011934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 161011935 . C . PASS END=161011937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,914:0,72,255:24,0 chr1 161011938 . T . PASS END=161011938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 161011939 . G . PASS END=161011946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,914:0,72,255:24,0 chr1 161011947 . C . PASS END=161011947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 161011948 . A . PASS END=161011958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,898:0,72,255:25,0 chr1 161011959 . T . PASS END=161011959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,803:0,44,255:24,0 chr1 161011960 . T . PASS END=161011960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 161011961 . T . PASS END=161011961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 161011962 . G . PASS END=161011995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr1 161011996 . C . PASS END=161012004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:23:0,42,630:0,59,255:19,0 chr1 161012005 . C . PASS END=161012005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr1 161012006 . A . PASS END=161012006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:14,0 chr1 161012007 . C . PASS END=161012007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:24:0,39,585:0,72,255:13,0 chr1 161012345 . C . PASS END=161012351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 161012352 . C . PASS END=161012352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 161012353 . C . PASS END=161012361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,868:0,61,255:26,0 chr1 161012362 . T . PASS END=161012460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,978:0,81,255:38,0 chr1 161012623 . C . PASS END=161012627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1365:0,98,255:38,0 chr1 161012628 . T . PASS END=161012672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:38:0,91,1551:0,91,255:40,0 chr1 161013058 . C . PASS END=161013065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,130,255:40,0 chr1 161017505 . T . PASS END=161017508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 161017509 . A . PASS END=161017509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 161017510 . G . PASS END=161017510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 161017511 . T . PASS END=161017517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,768:0,60,255:22,0 chr1 161017518 . C . PASS END=161017518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 161017519 . C . PASS END=161017528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr1 161017529 . G . PASS END=161017529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 161017530 . T . PASS END=161017533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 161017534 . C . PASS END=161017534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 161017535 . C . PASS END=161017550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 161017551 . T . PASS END=161017551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 161017552 . A . PASS END=161017554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 161017555 . A . PASS END=161017555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 161017556 . C . PASS END=161017570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:23,0 chr1 161017571 . C . PASS END=161017571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 161017572 . A . PASS END=161017572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:19,0 chr1 161017573 . A . PASS END=161017578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 161017579 . G . PASS END=161017579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 161017580 . G . PASS END=161017581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr1 161017582 . C . PASS END=161017602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,682:0,44,255:19,0 chr1 161017603 . G . PASS END=161017605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 161017606 . G . PASS END=161017618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:17:0,43,629:0,43,255:16,0 chr1 161017619 . A . PASS END=161017619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 161017620 . C . PASS END=161017640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 161017641 . G . PASS END=161017641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr1 161017642 . C . PASS END=161017650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:18,0 chr1 161017651 . A . PASS END=161017651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 161017652 . T . PASS END=161017673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,631:0,44,255:19,0 chr1 161017674 . G . PASS END=161017674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 161017675 . G . PASS END=161017712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,596:0,48,255:19,0 chr1 161017713 . G . PASS END=161017740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:22,0 chr1 161017741 . C . PASS END=161017741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 161017742 . C . PASS END=161017749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161017750 . A . PASS END=161017769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 161017770 . C . PASS END=161017773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161017774 . G . PASS END=161017792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,737:0,57,255:19,0 chr1 161017793 . G . PASS END=161017796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:23,0 chr1 161017797 . C . PASS END=161017797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 161017798 . G . PASS END=161017802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 161017803 . A . PASS END=161017804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161017805 . G . PASS END=161017847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,768:0,63,255:25,0 chr1 161017848 . G . PASS END=161017849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr1 161017850 . G . PASS END=161017851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 161017852 . A . PASS END=161017881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,705:0,47,255:19,0 chr1 161017882 . C . PASS END=161017890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161017891 . T . PASS END=161017920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,662:0,44,255:19,0 chr1 161017921 . G . PASS END=161017973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,784:0,62,255:24,0 chr1 161017974 . A . PASS END=161017979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 161017980 . G . PASS END=161017982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161017983 . T . PASS END=161017983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 161017984 . T . PASS END=161018009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 161018010 . A . PASS END=161018010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 161018011 . C . PASS END=161018016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161018017 . G . PASS END=161018074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,629:0,51,255:19,0 chr1 161018075 . G . PASS END=161018090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 161018091 . T . PASS END=161018093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 161018094 . G . PASS END=161018101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 161018102 . C . PASS END=161018102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 161018103 . T . PASS END=161018111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 161018112 . G . PASS END=161018112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 161018113 . G . PASS END=161018113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 161018114 . C . PASS END=161018142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 161018143 . G . PASS END=161018143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 161018144 . G . PASS END=161018148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 161018149 . C . PASS END=161018217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,553:0,41,255:19,0 chr1 161018218 . A . PASS END=161018232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:24,0 chr1 161018233 . T . PASS END=161018233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 161018234 . G . PASS END=161018236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 161018237 . C . PASS END=161018237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 161018238 . T . PASS END=161018248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 161018249 . G . PASS END=161018252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 161018253 . C . PASS END=161018253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 161018254 . C . PASS END=161018260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 161018261 . C . PASS END=161018261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:28,0 chr1 161018262 . C . PASS END=161018653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:31:0,86,1122:0,86,255:40,0 chr1 161018654 . C . PASS END=161018654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:5:44:0,5,1243:0,5,255:35,0 chr1 161018655 . T . PASS END=161018690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:39:0,81,1342:0,81,255:40,0 chr1 161018691 . T . PASS END=161018691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1221:0,51,255:37,0 chr1 161018692 . C . PASS END=161018692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 161018693 . T . PASS END=161018693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1349:0,73,255:37,0 chr1 161018694 . C . PASS END=161018729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:40:0,90,1218:0,102,255:40,0 chr1 161018730 . T . PASS END=161018730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1191:0,59,255:28,0 chr1 161018731 . C . PASS END=161018738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1250:0,84,255:33,0 chr1 161018739 . T . PASS END=161018739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1294:0,67,255:29,0 chr1 161018740 . C . PASS END=161018741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 161018742 . T . PASS END=161018742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1136:0,66,255:32,0 chr1 161018743 . C . PASS END=161018745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1209:0,89,255:33,0 chr1 161018746 . T . PASS END=161018746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1056:0,55,255:29,0 chr1 161018747 . G . PASS END=161018751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1038:0,82,255:32,0 chr1 161018752 . T . PASS END=161018752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:30,0 chr1 161018753 . T . PASS END=161018756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:29,0 chr1 161018757 . G . PASS END=161018757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,978:0,46,255:25,0 chr1 161018758 . C . PASS END=161018758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 161018759 . C . PASS END=161018764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,82,255:26,0 chr1 161018765 . C . PASS END=161018765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 161018766 . T . PASS END=161018767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:62:32:0,62,926:0,62,255:27,0 chr1 161018768 . G . PASS END=161018769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 161018770 . T . PASS END=161018770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:27,0 chr1 161018771 . C . PASS END=161018771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 161018772 . T . PASS END=161018772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,910:0,70,255:27,0 chr1 161018773 . C . PASS END=161018773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161018774 . T . PASS END=161018774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 161018775 . G . PASS END=161018775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161018776 . G . PASS END=161018788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1008:0,71,255:27,0 chr1 161018789 . C . PASS END=161018790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 161018791 . C . PASS END=161018808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:25,0 chr1 161018809 . T . PASS END=161018809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 161018810 . G . PASS END=161018825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,908:0,64,255:26,0 chr1 161018826 . T . PASS END=161018848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr1 161018849 . G . PASS END=161018858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:26,0 chr1 161018859 . T . PASS END=161018861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:26:0,51,765:0,78,255:17,0 chr1 161018862 . T . PASS END=161018870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:21,0 chr1 161018871 . T . PASS END=161018871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,623:0,10,255:19,0 chr1 161018872 . G . PASS END=161018872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161018873 . T . PASS END=161018873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 161018874 . C . PASS END=161018879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161018880 . G . PASS END=161018885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 161018886 . C . PASS END=161018886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161018887 . T . PASS END=161018887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 161018888 . T . PASS END=161018889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161018890 . C . PASS END=161018890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:19,0 chr1 161018891 . A . PASS END=161018897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr1 161018898 . G . PASS END=161018898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 161018899 . C . PASS END=161018935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,719:0,62,255:24,0 chr1 161018936 . T . PASS END=161018936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,813:0,45,255:22,0 chr1 161018937 . G . PASS END=161018953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 161018954 . A . PASS END=161018954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr1 161018955 . A . PASS END=161018971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,64,255:24,0 chr1 161018972 . A . PASS END=161018972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:23,0 chr1 161018973 . T . PASS END=161018982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,961:0,75,255:25,0 chr1 161018983 . G . PASS END=161018983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 161018984 . G . PASS END=161018992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 161018993 . C . PASS END=161018993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 161018994 . T . PASS END=161018996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,914:0,62,255:24,0 chr1 161018997 . C . PASS END=161018998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 161018999 . A . PASS END=161018999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 161019000 . T . PASS END=161019000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 161019001 . T . PASS END=161019002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,894:0,75,255:25,0 chr1 161019003 . T . PASS END=161019010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 161019011 . A . PASS END=161019012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 161019013 . C . PASS END=161019019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:26,0 chr1 161019020 . C . PASS END=161019039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,964:0,81,255:33,0 chr1 161019040 . G C, 47.69 PASS DP=34;MQ=247.83;MQRankSum=4.881;ReadPosRankSum=1.522;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,14,0:0.412,0.000:34:7,5,0:13,9,0:47:82,0,50,493,707,1200:255,0,255:20,0:4.7688e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,6,8:10,10,7,7 chr1 161019041 . G . PASS END=161019072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1243:0,88,255:34,0 chr1 161019073 . C . PASS END=161019073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:29,0 chr1 161019074 . C . PASS END=161019075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:29,0 chr1 161019076 . C . PASS END=161019076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 161019077 . A . PASS END=161019077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 161019078 . T . PASS END=161019084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 161019085 . A . PASS END=161019085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 161019086 . C . PASS END=161019086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161019087 . A . PASS END=161019088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 161019089 . G . PASS END=161019093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 161019094 . C . PASS END=161019095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1003:0,60,255:27,0 chr1 161019096 . A . PASS END=161019097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161019098 . G . PASS END=161019117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,945:0,62,255:26,0 chr1 161019118 . C . PASS END=161019118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 161019119 . C . PASS END=161019124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 161019214 . C . PASS END=161019223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 161019224 . A . PASS END=161019224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 161019225 . C . PASS END=161019231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 161019232 . G . PASS END=161019232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 161019233 . A . PASS END=161019251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 161019252 . T . PASS END=161019279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:19,0 chr1 161019280 . G . PASS END=161019315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:23,0 chr1 161019316 . A . PASS END=161019317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 161019318 . C . PASS END=161019319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:22,0 chr1 161019320 . T . PASS END=161019320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 161019321 . C . PASS END=161019321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 161019322 . T . PASS END=161019322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 161019323 . G . PASS END=161019340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,845:0,69,255:23,0 chr1 161019341 . T . PASS END=161019341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:21,0 chr1 161019342 . C . PASS END=161019373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr1 161019374 . G . PASS END=161019375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 161019376 . G . PASS END=161019381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 161019382 . C . PASS END=161019385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:22:0,50,765:0,50,255:18,0 chr1 161019386 . T . PASS END=161019418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr1 161019419 . A . PASS END=161019419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 161019420 . A . PASS END=161019441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:22,0 chr1 161019442 . C . PASS END=161019479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,560:0,48,255:19,0 chr1 161021104 . C . PASS END=161021109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,627:0,40,255:19,0 chr1 161021110 . G . PASS END=161021111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 161021112 . C . PASS END=161021116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,714:0,46,255:19,0 chr1 161021117 . G . PASS END=161021120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 161021121 . A . PASS END=161021121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 161021122 . G . PASS END=161021126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 161021127 . G . PASS END=161021127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 161021128 . G . PASS END=161021132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 161021133 . G . PASS END=161021135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 161021136 . C . PASS END=161021137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 161021138 . A . PASS END=161021139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,776:0,52,255:23,0 chr1 161021140 . G . PASS END=161021144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 161021145 . G . PASS END=161021145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:24,0 chr1 161021146 . A . PASS END=161021157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,961:0,65,255:26,0 chr1 161021158 . G . PASS END=161021158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161021159 . C . PASS END=161021159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:25,0 chr1 161021160 . C . PASS END=161021162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1016:0,71,255:27,0 chr1 161021163 . T . PASS END=161021212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1127:0,82,255:37,0 chr1 161021213 . G . PASS END=161021213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:33,0 chr1 161021214 . T . PASS END=161021227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1185:0,94,255:36,0 chr1 161021228 . C . PASS END=161021228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:33,0 chr1 161021229 . G . PASS END=161021238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,95,255:34,0 chr1 161021239 . T . PASS END=161021246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:33:0,75,1125:0,89,255:26,0 chr1 161021247 . G . PASS END=161021293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1169:0,80,255:32,0 chr1 161021294 . G . PASS END=161021295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 161021296 . C . PASS END=161021322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1125:0,89,255:30,0 chr1 161021323 . T . PASS END=161021323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 161021324 . G . PASS END=161021350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1164:0,90,255:31,0 chr1 161021351 . A . PASS END=161021351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 161021352 . G . PASS END=161021357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 161021358 . G . PASS END=161021358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 161021359 . G . PASS END=161021366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1163:0,80,255:30,0 chr1 161021367 . G . PASS END=161021367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 161021368 . G . PASS END=161021375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 161021376 . T . PASS END=161021376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,776:0,70,255:28,0 chr1 161021377 . T . PASS END=161021377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161021378 . T . PASS END=161021410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 161021411 . T . PASS END=161021411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:21,0 chr1 161021412 . T . PASS END=161021414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 161021415 . C . PASS END=161021426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 161021427 . T . PASS END=161021445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,615:0,51,255:17,0 chr1 161021446 . A . PASS END=161021446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 161021447 . G . PASS END=161021452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 161021453 . A . PASS END=161021454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 161021455 . G . PASS END=161021460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 161021461 . A . PASS END=161021461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 161021462 . T . PASS END=161021465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161021466 . C . PASS END=161021466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 161021467 . T . PASS END=161021467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr1 161021468 . T . PASS END=161021473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 161021474 . G . PASS END=161021474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 161021475 . G . PASS END=161021477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 161021478 . C . LowGQ END=161021479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,402:0,0,255:11,0 chr1 161021480 . G . PASS END=161021480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161021481 . C . PASS END=161021481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 161021482 . T . PASS END=161021482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,363:0,6,255:11,0 chr1 161021483 . G . PASS END=161021485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,466:0,36,255:13,0 chr1 161021486 . C . LowGQ END=161021486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,365:22,0,255:10,0 chr1 161021487 . C . PASS END=161021487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 161021488 . C . PASS END=161021489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 161021490 . A . LowGQ END=161021490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,357:30,0,255:10,0 chr1 161021491 . C . PASS END=161021491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 161021492 . C . PASS END=161021492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 161021493 . A . LowGQ END=161021494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,341:0,0,255:10,0 chr1 161021495 . C . PASS END=161021498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 161021499 . T . PASS END=161021499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,339:0,6,255:10,0 chr1 161021500 . C . PASS END=161021500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 161021501 . T . PASS END=161021501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr1 161021502 . G . LowGQ END=161021502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,371:8,0,255:10,0 chr1 161021503 . G . PASS END=161021503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 161021504 . C . PASS END=161021504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 161021505 . T . PASS END=161021505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:9,0 chr1 161022076 . C . PASS END=161022097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,864:0,69,255:28,0 chr1 161022098 . A . PASS END=161022098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 161022099 . C . PASS END=161022099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 161022100 . T . PASS END=161022153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1172:0,81,255:38,0 chr1 161022230 . C . PASS END=161022235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,976:0,65,255:24,0 chr1 161022236 . C . PASS END=161022236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,837:0,26,255:21,0 chr1 161022237 . C . PASS END=161022245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,862:0,61,255:22,0 chr1 161022246 . C . PASS END=161022246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 161022247 . C . PASS END=161022247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 161022248 . G . PASS END=161022249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:21,0 chr1 161022250 . G . PASS END=161022250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 161022251 . G . PASS END=161022254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:19,0 chr1 161022255 . T . PASS END=161022255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,451:0,35,255:16,0 chr1 161022256 . T . PASS END=161022263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,717:0,47,255:19,0 chr1 161022264 . A . PASS END=161022264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161022265 . G . PASS END=161022265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 161022266 . T . PASS END=161022266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,697:0,35,255:20,0 chr1 161022267 . C . PASS END=161022270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161022271 . T . PASS END=161022271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:22,0 chr1 161022272 . G . PASS END=161022277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 161022278 . A . PASS END=161022278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,685:0,39,255:21,0 chr1 161022279 . G . PASS END=161022279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 161022280 . C . PASS END=161022284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 161022285 . T . PASS END=161022285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:21,0 chr1 161022286 . A . PASS END=161022288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 161022289 . T . PASS END=161022290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:21,0 chr1 161022291 . G . PASS END=161022292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161022293 . A . PASS END=161022293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 161022294 . G . PASS END=161022294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161022295 . A . PASS END=161022296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,751:0,50,255:22,0 chr1 161022297 . A . PASS END=161022300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,732:0,66,255:22,0 chr1 161022301 . C . PASS END=161022301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 161022302 . T . PASS END=161022310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 161022311 . T . PASS END=161022319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,637:0,43,255:18,0 chr1 161022320 . A . PASS END=161022320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,557:0,10,255:15,0 chr1 161022321 . A . PASS END=161022327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 161022328 . T . PASS END=161022328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 161022329 . T . PASS END=161022331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,577:0,54,255:18,0 chr1 161022332 . T . PASS END=161022332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 161022333 . C . PASS END=161022333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 161022416 . T . PASS END=161022417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:22:0,50,767:0,50,255:19,0 chr1 161022418 . G . PASS END=161022418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 161022419 . T . PASS END=161022436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 161022437 . A . PASS END=161022437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr1 161022438 . T . PASS END=161022439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,892:0,61,255:25,0 chr1 161022440 . G . PASS END=161022441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,803:0,42,255:24,0 chr1 161022442 . A . PASS END=161022449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,895:0,62,255:26,0 chr1 161022450 . G . PASS END=161022450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:23,0 chr1 161022451 . C . PASS END=161022452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 161022453 . G . PASS END=161022453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:24,0 chr1 161022454 . C . PASS END=161022466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 161022467 . C . PASS END=161022467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 161022468 . C . PASS END=161022470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 161022471 . C . PASS END=161022471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 161022472 . G . PASS END=161022480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 161022481 . C . PASS END=161022503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 161022504 . G . PASS END=161022506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 161022507 . G . PASS END=161022507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161022508 . T . PASS END=161022508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161022509 . G . PASS END=161022515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161022516 . G . PASS END=161022516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:25,0 chr1 161022517 . C . PASS END=161022567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,861:0,69,255:26,0 chr1 161022568 . C . PASS END=161022587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,610:0,49,255:19,0 chr1 161023048 . C . PASS END=161023174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:84:41:0,84,1260:0,94,255:40,0 chr1 161023175 . C . PASS END=161023175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 161024156 . C . PASS END=161024261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1177:0,80,255:40,0 chr1 161024262 . T . PASS END=161024262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:26,0 chr1 161024263 . C . PASS END=161024263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 161024413 . C . PASS END=161024495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:33:0,95,1197:0,95,255:40,0 chr1 161026178 . A . PASS END=161026322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:36:0,94,1046:0,94,255:40,0 chr1 161029404 . C . PASS END=161029409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 161029410 . T . PASS END=161029410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 161029411 . T . PASS END=161029412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 161029413 . T . PASS END=161029414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 161029415 . G . PASS END=161029418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 161029419 . T . PASS END=161029419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 161029420 . T . PASS END=161029430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,850:0,72,255:26,0 chr1 161029431 . C . PASS END=161029431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 161029432 . C . PASS END=161029437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,984:0,68,255:27,0 chr1 161029438 . G . PASS END=161029453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 161029454 . C . PASS END=161029476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr1 161029477 . A . PASS END=161029477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,730:0,36,255:23,0 chr1 161029478 . T . PASS END=161029493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 161029494 . A . PASS END=161029506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,56,255:19,0 chr1 161039318 . C . PASS END=161039318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 161039319 . C . PASS END=161039335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:31,0 chr1 161039336 . G . PASS END=161039336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 161039337 . C . PASS END=161039414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1133:0,83,255:35,0 chr1 161042451 . T . PASS END=161042453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 161042454 . G . PASS END=161042462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 161042463 . T . PASS END=161042463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr1 161042464 . C . PASS END=161042471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:28,0 chr1 161042472 . A . PASS END=161042472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 161042473 . T . PASS END=161042473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,936:0,84,255:28,0 chr1 161042474 . T . PASS END=161042474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:27,0 chr1 161042475 . G . PASS END=161042477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 161042478 . G . PASS END=161042478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr1 161042479 . T . PASS END=161042528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1033:0,84,255:33,0 chr1 161042529 . A . PASS END=161042529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr1 161042530 . A . PASS END=161042556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1075:0,85,255:34,0 chr1 161042557 . T . PASS END=161042557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:29,0 chr1 161042558 . C . PASS END=161042577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 161042578 . T . PASS END=161042578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1016:0,24,255:25,0 chr1 161042579 . C . PASS END=161042625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1140:0,83,255:34,0 chr1 161042626 . T . PASS END=161042626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 161042627 . C . PASS END=161042641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1210:0,86,255:32,0 chr1 161042642 . G . PASS END=161042675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,906:0,65,255:26,0 chr1 161042948 . C . PASS END=161042952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 161042953 . C . PASS END=161042953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 161042954 . T . PASS END=161042967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 161042968 . G . PASS END=161042968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161042969 . G . PASS END=161042971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 161042972 . C . PASS END=161042976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161042977 . G . PASS END=161042977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 161042978 . A . PASS END=161042978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161042979 . G . PASS END=161042980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 161042981 . G . PASS END=161042989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161042990 . A . PASS END=161043011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:30,0 chr1 161043012 . C . PASS END=161043012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 161043013 . A . PASS END=161043047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1117:0,80,255:32,0 chr1 161043048 . A . PASS END=161043048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161043049 . T . PASS END=161043054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 161043055 . T . PASS END=161043067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 161043068 . T . PASS END=161043089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:46:19:0,46,674:0,46,255:19,0 chr1 161043510 . C . PASS END=161043585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,102,1530:0,109,255:40,0 chr1 161044007 . T . PASS END=161044166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:95:34:0,95,1349:0,95,255:40,1 chr1 161044401 . C . PASS END=161044443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,800:0,61,255:26,0 chr1 161044444 . A . PASS END=161044444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 161044445 . T . PASS END=161044460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,892:0,72,255:26,0 chr1 161044461 . C . PASS END=161044461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 161044462 . G . PASS END=161044473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 161044474 . G . PASS END=161044495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 161044496 . A . PASS END=161044496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 161044497 . A . PASS END=161044497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161044498 . G . PASS END=161044517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:25,0 chr1 161044518 . C . PASS END=161044518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 161044519 . T . PASS END=161044525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 161044526 . C . PASS END=161044545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 161044546 . C . PASS END=161044548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 161044549 . C . PASS END=161044549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161046145 . C . PASS END=161046147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 161046148 . G . PASS END=161046243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,995:0,84,255:40,0 chr1 161046244 . C . PASS END=161046244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:33,0 chr1 161046245 . T . PASS END=161046265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:35,0 chr1 161047243 . A . PASS END=161047250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:19,0 chr1 161047251 . T . PASS END=161047254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,746:0,66,255:22,0 chr1 161047255 . G . PASS END=161047255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 161047256 . G . PASS END=161047257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 161047258 . T . PASS END=161047260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,864:0,69,255:24,0 chr1 161047261 . G . LowGQ END=161047261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,767:5,0,255:22,0 chr1 161047262 . G . PASS END=161047263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 161047264 . T . PASS END=161047264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 161047265 . G . PASS END=161047268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr1 161047269 . C . PASS END=161047272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 161047273 . G . PASS END=161047273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 161047274 . G . PASS END=161047277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 161047278 . T . PASS END=161047278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 161047279 . G . PASS END=161047279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 161047280 . G . PASS END=161047280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 161047281 . A . PASS END=161047283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 161047284 . A . PASS END=161047284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 161047285 . G . PASS END=161047286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 161047287 . C . PASS END=161047287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 161047288 . C . PASS END=161047389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1201:0,86,255:37,0 chr1 161047390 . A . PASS END=161047420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 161047421 . G . PASS END=161047421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 161047422 . T . PASS END=161047425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 161047426 . A . PASS END=161047426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 161047427 . G . PASS END=161047443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,62,255:22,0 chr1 161047444 . G . PASS END=161047496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:16:0,47,568:0,47,255:19,0 chr1 161047497 . A . PASS END=161047497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 161047498 . G . PASS END=161047506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr1 161047507 . C . PASS END=161047507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 161047508 . A . PASS END=161047516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:15,0 chr1 161047517 . T . PASS END=161047533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,474:0,39,255:13,0 chr1 161049380 . C . PASS END=161049384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 161049385 . A . PASS END=161049385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 161049386 . C . PASS END=161049392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:19,0 chr1 161049393 . C . PASS END=161049395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 161049396 . C . PASS END=161049404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161049405 . C . PASS END=161049415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 161049416 . C . PASS END=161049416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 161049417 . G . PASS END=161049423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 161049424 . A . PASS END=161049425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 161049426 . G . PASS END=161049426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr1 161049427 . G . PASS END=161049456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 161049457 . T . PASS END=161049458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 161049459 . C . PASS END=161049461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161049462 . C . PASS END=161049511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,576:0,48,255:19,0 chr1 161049512 . G . PASS END=161049512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 161049513 . C . PASS END=161049528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 161049529 . C . PASS END=161049550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,421:0,36,255:13,0 chr1 161049551 . C . PASS END=161049564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 161049565 . T . PASS END=161049569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161049570 . G . PASS END=161049573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 161049574 . A . PASS END=161049574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 161049575 . G . PASS END=161049608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:19,0 chr1 161049609 . C . PASS END=161049689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,800:0,63,255:24,0 chr1 161049690 . C . PASS END=161049691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161049692 . C . PASS END=161049701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 161049702 . C . PASS END=161049717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 161049718 . A . PASS END=161049719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 161049720 . C . PASS END=161049734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 161049735 . C . PASS END=161049739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 161059008 . C . PASS END=161059086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1260:0,93,255:40,0 chr1 161068326 . A . PASS END=161068326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 161068327 . T . PASS END=161068327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 161068328 . G . PASS END=161068336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr1 161068337 . C . PASS END=161068337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 161068338 . G . PASS END=161068342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 161068343 . C . PASS END=161068343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 161068344 . C . PASS END=161068347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 161068348 . G . PASS END=161068348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 161068349 . T . PASS END=161068349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 161068350 . C . PASS END=161068350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 161068351 . G . PASS END=161068358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,584:0,48,255:17,0 chr1 161068359 . G . PASS END=161068380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 161068381 . C . PASS END=161068382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,790:0,52,255:21,0 chr1 161068383 . G . PASS END=161068390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr1 161068391 . G . PASS END=161068427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,801:0,69,255:26,0 chr1 161068428 . G A, 47.81 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=2.468;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,10,0:0.400,0.000:25:11,3,0:4,7,0:47:83,0,50,355,536,892:255,0,255:15,0:4.7814e+01,9.3708e-05,5.3000e+01,3.5515e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,4,6:6,9,7,3 chr1 161068429 . A . PASS END=161068457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,838:0,69,255:24,0 chr1 161068458 . G . PASS END=161068460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,729:0,49,255:19,0 chr1 161068461 . C . PASS END=161068461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161068462 . T . PASS END=161068462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 161068463 . C . PASS END=161068463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161068464 . C . PASS END=161068464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 161068465 . T . PASS END=161068465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:19,0 chr1 161068466 . A . PASS END=161068473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 161068474 . G . PASS END=161068479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161068480 . G . PASS END=161068494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:19:0,47,634:0,47,255:19,0 chr1 161068495 . A . PASS END=161068496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 161068497 . A . PASS END=161068527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr1 161068528 . C . PASS END=161068534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 161068535 . A . PASS END=161068535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 161068536 . T . PASS END=161068537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161068538 . G . PASS END=161068538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 161068539 . G . PASS END=161068553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 161068554 . C . PASS END=161068564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 161068565 . T . PASS END=161068565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,870:0,64,255:26,0 chr1 161068566 . C . PASS END=161068575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 161068576 . C . PASS END=161068576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 161068577 . G . PASS END=161068582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 161068583 . C . PASS END=161068583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 161068584 . G . PASS END=161068584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 161068585 . T . PASS END=161068585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:28,0 chr1 161068586 . G . PASS END=161068589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 161068590 . G . PASS END=161068590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr1 161068591 . G . PASS END=161068591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161068592 . G . PASS END=161068592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 161068593 . C . PASS END=161068604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 161068605 . G . PASS END=161068605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:26,0 chr1 161068606 . T . PASS END=161068607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 161068608 . G . PASS END=161068609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 161068610 . G . PASS END=161068611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161068612 . G . PASS END=161068634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,69,255:25,0 chr1 161068635 . T . PASS END=161068636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 161068637 . G . PASS END=161068644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 161068645 . T . PASS END=161068645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161068646 . G . PASS END=161068646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161068647 . A . PASS END=161068647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 161068648 . C . PASS END=161068666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:20,0 chr1 161068667 . C . PASS END=161068670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,714:0,46,255:19,0 chr1 161068671 . G . PASS END=161068676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 161068677 . G . PASS END=161068678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 161068679 . G . PASS END=161068682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 161068683 . T . PASS END=161068683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161068684 . G . PASS END=161068685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161068686 . A . PASS END=161068713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,50,255:19,0 chr1 161068714 . C . PASS END=161068715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 161068716 . G . PASS END=161068716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 161068717 . G . PASS END=161068724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 161068725 . A . PASS END=161068725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr1 161068726 . G . PASS END=161068726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 161068727 . T . PASS END=161068727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:11,0 chr1 161068728 . C . PASS END=161068728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 161068729 . A . PASS END=161068729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 161068730 . C . PASS END=161068733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 161068734 . T . PASS END=161068735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 161068736 . C . PASS END=161068747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,358:0,33,255:12,0 chr1 161068748 . T . PASS END=161068748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 161068749 . G . PASS END=161068754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 161068755 . G . PASS END=161068808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:18,0 chr1 161068809 . A . PASS END=161068822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,32,255:13,0 chr1 161068823 . A . PASS END=161068828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 161068829 . G . PASS END=161068843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 161068844 . C . PASS END=161068845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 161068846 . C . PASS END=161068847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 161068848 . T . PASS END=161068852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 161069136 . C . PASS END=161069160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1035:0,87,255:30,0 chr1 161069161 . G . PASS END=161069161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 161069162 . C . PASS END=161069295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1210:0,86,255:40,0 chr1 161069369 . T . PASS END=161069372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 161069373 . T . PASS END=161069373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr1 161069374 . T . PASS END=161069485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:32:0,93,1205:0,96,255:40,0 chr1 161069486 . C . PASS END=161069486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1423:0,74,255:40,0 chr1 161069487 . T . PASS END=161069568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:37:0,84,1260:0,94,255:40,0 chr1 161069569 . T . PASS END=161069569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:28,0 chr1 161069570 . C . PASS END=161069574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:30,0 chr1 161069575 . T . PASS END=161069575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:38:33:0,38,1110:0,38,255:27,0 chr1 161069576 . C . PASS END=161069579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 161069580 . G . PASS END=161069580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:24,0 chr1 161069581 . A . PASS END=161069586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 161069851 . G . PASS END=161069869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 161069870 . G . PASS END=161069911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,519:0,42,255:19,0 chr1 161069912 . C . PASS END=161069921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 161069922 . T . PASS END=161069932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr1 161069933 . T . PASS END=161069935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 161069936 . T . PASS END=161069936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 161069937 . C . PASS END=161069938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 161069939 . G . PASS END=161069939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 161069940 . C . PASS END=161069945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 161069946 . C . PASS END=161069977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,654:0,43,255:19,0 chr1 161069978 . A . PASS END=161069979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 161069980 . C . PASS END=161069987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 161069988 . C . PASS END=161070009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,405:0,36,255:13,0 chr1 161070010 . T . PASS END=161070014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 161070473 . C . PASS END=161070475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 161070476 . G . PASS END=161070498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,814:0,63,255:26,0 chr1 161070499 . T . PASS END=161070515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1002:0,81,255:37,0 chr1 161070516 . C . PASS END=161070516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:36,0 chr1 161070517 . C . PASS END=161070644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,96,255:40,0 chr1 161070645 . T . PASS END=161070649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:24,0 chr1 161071838 . C . PASS END=161071961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,107,1411:0,107,255:40,0 chr1 161072077 . C . PASS END=161072165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:36:0,88,1395:0,88,255:40,0 chr1 161087742 . C . PASS END=161087760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr1 161087761 . C . PASS END=161087761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 161087762 . C . PASS END=161087770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 161087771 . C . PASS END=161087771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 161087772 . G . PASS END=161087773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 161087774 . C . PASS END=161087791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1030:0,68,255:26,0 chr1 161087792 . C . PASS END=161087792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:22,0 chr1 161087793 . G . PASS END=161087797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 161087798 . G . PASS END=161087816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:40:19:0,40,635:0,40,255:18,0 chr1 161087947 . A . PASS END=161087955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,688:0,44,255:19,0 chr1 161087956 . G . PASS END=161087957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 161087958 . T . PASS END=161087960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 161087961 . A . PASS END=161087961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,660:0,24,255:17,0 chr1 161087962 . T . PASS END=161087983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:18:0,43,653:0,43,255:18,0 chr1 161087984 . T . PASS END=161087984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,557:0,10,255:15,0 chr1 161087985 . A . PASS END=161087997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,43,255:18,0 chr1 161087998 . C . PASS END=161087998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 161087999 . G . PASS END=161087999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 161088289 . A . PASS END=161088341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:58:0,120,1800:0,158,255:40,0 chr1 161088576 . G . PASS END=161088582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 161088583 . T G, 49.37 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=2.401;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,14,0:0.452,0.000:31:10,8,0:7,6,0:48:84,0,50,501,605,1106:255,0,255:16,0:4.9368e+01,7.1964e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,7,7:10,7,5,9 chr1 161088584 . T . PASS END=161088588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:30,0 chr1 161088589 . A . PASS END=161088589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 161088590 . C . PASS END=161088601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1119:0,90,255:31,0 chr1 161088602 . A . PASS END=161088602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 161088603 . C . PASS END=161088605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 161088606 . A . PASS END=161088606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr1 161088607 . T . PASS END=161088620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 161088621 . G . PASS END=161088642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:28:0,83,995:0,83,255:30,0 chr1 161088643 . C . PASS END=161088643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 161088644 . A . PASS END=161088645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161088646 . C . PASS END=161088671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,745:0,67,255:26,0 chr1 161088924 . G . PASS END=161088926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 161088927 . C . PASS END=161088927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 161088928 . A . PASS END=161088929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 161088930 . A . PASS END=161088930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 161088931 . G . PASS END=161088933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 161088934 . A . PASS END=161088934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 161088935 . T . PASS END=161088941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:18,0 chr1 161088942 . C . PASS END=161088942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 161088943 . T . PASS END=161088953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:18,0 chr1 161088954 . C . PASS END=161088954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 161088955 . T . PASS END=161088963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:19,0 chr1 161088964 . C . PASS END=161088973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr1 161088974 . C . PASS END=161088974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 161088975 . T . PASS END=161088980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,869:0,69,255:26,0 chr1 161088981 . C . PASS END=161088981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 161088982 . C . PASS END=161088982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 161088983 . A . PASS END=161088990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:28,0 chr1 161088991 . T . PASS END=161088993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 161088994 . A . PASS END=161089010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1133:0,93,255:31,0 chr1 161089011 . G . PASS END=161089011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 161089012 . A . PASS END=161089038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1111:0,83,255:36,0 chr1 161089039 . C . PASS END=161089039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:35,0 chr1 161089040 . G . PASS END=161089042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 161089043 . A . PASS END=161089043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:32,0 chr1 161089044 . G . PASS END=161089065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1186:0,90,255:32,0 chr1 161089066 . C . PASS END=161089066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 161089067 . T . PASS END=161089068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 161089069 . G . PASS END=161089069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 161089070 . C . PASS END=161089102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1149:0,93,255:32,0 chr1 161089103 . G . PASS END=161089103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:28,0 chr1 161089104 . G . PASS END=161089115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 161089116 . G . PASS END=161089117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,99,255:26,0 chr1 161089118 . C . PASS END=161089132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,89,255:29,0 chr1 161089133 . A . PASS END=161089136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161089137 . A . PASS END=161089137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161089138 . C . PASS END=161089138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 161089139 . T . PASS END=161089139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161089140 . G . PASS END=161089155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,954:0,78,255:26,0 chr1 161089156 . G . PASS END=161089156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 161089157 . A . PASS END=161089176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:25,0 chr1 161089177 . A . PASS END=161089178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161089299 . G . PASS END=161089389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,99,255:40,0 chr1 161089390 . C . PASS END=161089402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,71,255:26,0 chr1 161089609 . G . PASS END=161089613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 161089614 . G . PASS END=161089617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161089618 . T . PASS END=161089618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 161089619 . G . PASS END=161089628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr1 161089629 . A . PASS END=161089629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr1 161089630 . G . PASS END=161089630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161089631 . G . PASS END=161089631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:27,0 chr1 161089632 . A . PASS END=161089635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 161089636 . C . PASS END=161089636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:30,0 chr1 161089637 . A . PASS END=161089638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 161089639 . A . PASS END=161089639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1137:0,69,255:30,0 chr1 161089640 . T . PASS END=161089658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1230:0,91,255:36,0 chr1 161089659 . C . PASS END=161089659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:35,0 chr1 161089660 . C . PASS END=161089739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1125:0,80,255:40,0 chr1 161089740 . A . PASS END=161089740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161089741 . A . PASS END=161089742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161089897 . A . PASS END=161089898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr1 161089899 . T . PASS END=161089902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,909:0,62,255:26,0 chr1 161089903 . C . PASS END=161089903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr1 161089904 . T . PASS END=161089910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:26,0 chr1 161089911 . C . PASS END=161089911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161089912 . T . PASS END=161089912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 161089913 . G . PASS END=161089933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1150:0,80,255:35,0 chr1 161089934 . A . PASS END=161089934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 161089935 . A . PASS END=161090008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1189:0,91,255:39,0 chr1 161090009 . C . PASS END=161090010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 161090011 . G . PASS END=161090011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:25,0 chr1 161090012 . C . PASS END=161090022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 161090289 . G . PASS END=161090290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 161090291 . G . PASS END=161090291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 161090292 . T . PASS END=161090322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:18,0 chr1 161090323 . G . PASS END=161090325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 161090326 . A . PASS END=161090326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 161090327 . T . PASS END=161090332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 161090333 . G . PASS END=161090334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161090335 . C . PASS END=161090344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr1 161090345 . G . PASS END=161090363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:31,0 chr1 161090364 . A . PASS END=161090364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1022:0,68,255:31,0 chr1 161090365 . A . PASS END=161090366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:30,0 chr1 161090367 . A . PASS END=161090367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,0 chr1 161090368 . G . PASS END=161090368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 161090369 . A . PASS END=161090369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 161090370 . G . PASS END=161090372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161090373 . A . PASS END=161090373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 161090374 . G . PASS END=161090377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:30,0 chr1 161090378 . T . PASS END=161090378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 161090379 . G . PASS END=161090379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161090380 . G . PASS END=161090380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 161090381 . C . PASS END=161090397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 161090398 . A . PASS END=161090398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr1 161090399 . C . PASS END=161090403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 161090404 . G . PASS END=161090404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr1 161090405 . G . PASS END=161090408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 161090409 . A . PASS END=161090411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161090412 . G . PASS END=161090417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161090418 . G . PASS END=161090439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr1 161090440 . G . PASS END=161090440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 161090441 . C . PASS END=161090448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 161090449 . T . PASS END=161090449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 161090450 . T . PASS END=161090455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 161090456 . A . PASS END=161090456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 161090457 . A . PASS END=161090457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 161090458 . T . PASS END=161090458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 161090459 . A . PASS END=161090459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:22,0 chr1 161090460 . G . PASS END=161090471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 161090472 . C . PASS END=161090475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161090476 . G . PASS END=161090476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:18,0 chr1 161090477 . A . PASS END=161090508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 161090509 . A . PASS END=161090509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 161090510 . C . PASS END=161090511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 161090512 . G . PASS END=161090526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:12,0 chr1 161090527 . A . PASS END=161090527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 161090528 . T . PASS END=161090542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 161090543 . C . PASS END=161090543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 161090544 . C . PASS END=161090547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,380:0,33,255:11,0 chr1 161090548 . T . PASS END=161090548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 161090549 . G . PASS END=161090555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 161091937 . T . PASS END=161092003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,986:0,81,255:32,0 chr1 161092004 . T . PASS END=161092004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 161092005 . C . PASS END=161092006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161092007 . A . PASS END=161092031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,892:0,61,255:26,0 chr1 161092032 . C . PASS END=161092032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 161092033 . A . PASS END=161092033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 161092034 . T . PASS END=161092039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 161092040 . A . PASS END=161092112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,955:0,65,255:27,0 chr1 161092113 . G . PASS END=161092123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1141:0,84,255:30,0 chr1 161092124 . T . PASS END=161092124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:32:31:0,32,1055:0,32,255:29,0 chr1 161092125 . C . PASS END=161092145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,95,255:33,0 chr1 161092146 . A . PASS END=161092146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 161092147 . C . PASS END=161092170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:32,0 chr1 161092171 . C . PASS END=161092201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:26:0,62,945:0,62,255:26,0 chr1 161092202 . T . PASS END=161092202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161092203 . G . PASS END=161092204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 161092205 . T . PASS END=161092210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 161092211 . C . PASS END=161092211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 161092212 . G . PASS END=161092213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161092214 . T . PASS END=161092222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,914:0,73,255:26,0 chr1 161092223 . C . PASS END=161092234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1045:0,81,255:29,0 chr1 161092235 . T . PASS END=161092235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 161092236 . C . PASS END=161092242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 161092243 . G . PASS END=161092243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 161092244 . T . PASS END=161092255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 161092256 . T . PASS END=161092269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:25,0 chr1 161092270 . A . PASS END=161092277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:22:0,56,845:0,56,255:19,0 chr1 161092278 . G . PASS END=161092284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr1 161092285 . G . PASS END=161092313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,615:0,51,255:19,0 chr1 161092775 . A . PASS END=161092781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 161092782 . A . PASS END=161092785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 161092786 . T . PASS END=161092786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 161092787 . A . PASS END=161092788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 161092789 . A . PASS END=161092789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,725:0,69,255:28,0 chr1 161092790 . C . PASS END=161092795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr1 161092796 . A . PASS END=161092796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 161092797 . G . PASS END=161092798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 161092799 . G . PASS END=161092946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:34:0,82,1247:0,82,255:40,0 chr1 161092947 . T . PASS END=161092948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:29,0 chr1 161092949 . G . PASS END=161092949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 161092950 . C . PASS END=161092950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 161092951 . C . PASS END=161092954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 161092955 . T . PASS END=161092973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 161092974 . C . PASS END=161092974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 161092975 . G . PASS END=161092978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 161092979 . T . PASS END=161092982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:16,0 chr1 161092983 . G . PASS END=161092996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:13:0,30,450:0,31,255:13,0 chr1 161092997 . G . PASS END=161092997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:9,0 chr1 161092998 . A . PASS END=161093000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr1 161093001 . G . PASS END=161093001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 161093002 . T . PASS END=161093011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 161093629 . C . PASS END=161093629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 161093630 . T . PASS END=161093630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 161093631 . G . PASS END=161093631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 161093632 . T . PASS END=161093636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr1 161093637 . G . PASS END=161093639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:22,0 chr1 161093640 . G . PASS END=161093640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 161093641 . G . PASS END=161093641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 161093642 . C . PASS END=161093648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 161093649 . G . PASS END=161093652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 161093653 . T . PASS END=161093653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 161093654 . T . PASS END=161093656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161093657 . T . PASS END=161093657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 161093658 . T . PASS END=161093658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161093659 . C . PASS END=161093659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 161093660 . T . PASS END=161093660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161093661 . G . PASS END=161093661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 161093662 . G . PASS END=161093664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 161093665 . C . PASS END=161093665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 161093666 . A . PASS END=161093666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161093667 . C . PASS END=161093668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 161093669 . G . PASS END=161093721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1125:0,80,255:35,0 chr1 161093722 . C . PASS END=161093723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 161093724 . A . PASS END=161093724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 161093725 . G . PASS END=161093725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 161093726 . A . PASS END=161093728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 161093729 . A . PASS END=161093730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 161093731 . G . PASS END=161093731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,953:0,18,255:25,0 chr1 161093732 . G . PASS END=161093732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161093733 . C . PASS END=161093734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161093735 . C . PASS END=161093736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161093928 . C . PASS END=161093945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,823:0,69,255:26,0 chr1 161093946 . G . PASS END=161093947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 161093948 . G . PASS END=161093948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 161093949 . T . PASS END=161093989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1062:0,84,255:36,0 chr1 161093990 . A . PASS END=161093990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1239:0,64,255:30,0 chr1 161093991 . G . PASS END=161094152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1263:0,89,255:40,0 chr1 161094153 . C . PASS END=161094189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,105,1575:0,113,255:40,0 chr1 161094190 . A G, 43.67 PASS DP=41;MQ=250.00;MQRankSum=5.264;ReadPosRankSum=0.961;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,15,0:0.366,0.000:41:14,9,0:12,6,0:43:78,0,50,527,930,1457:255,0,255:25,0:4.3670e+01,2.0839e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,7,8:13,13,11,4 chr1 161094191 . T . PASS END=161094227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,84,255:38,0 chr1 161094228 . T . PASS END=161094229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1202:0,93,255:31,0 chr1 161094230 . G . PASS END=161094230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 161094231 . C . PASS END=161094239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1180:0,93,255:31,0 chr1 161094240 . T . PASS END=161094240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:28,0 chr1 161094241 . T . PASS END=161094245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 161094246 . C . PASS END=161094252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 161123788 . A . PASS END=161123910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:46:0,103,1574:0,103,255:40,0 chr1 161126740 . T . PASS END=161126807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,101,1441:0,101,255:40,0 chr1 161127044 . G . PASS END=161127107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:87:0,120,1800:0,190,255:40,0 chr1 161127407 . A . PASS END=161127483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,120,1800:0,123,255:40,0 chr1 161127911 . G . PASS END=161128001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,120,255:40,0 chr1 161128202 . C . PASS END=161128219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1161:0,80,255:35,0 chr1 161128220 . G . PASS END=161128220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr1 161128221 . T . PASS END=161128230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1343:0,108,255:36,0 chr1 161128231 . T . PASS END=161128231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr1 161128232 . G . PASS END=161128247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1242:0,91,255:38,0 chr1 161128248 . G . PASS END=161128248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 161128249 . C . PASS END=161128265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:36,0 chr1 161128266 . A . PASS END=161128266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1152:0,69,255:30,0 chr1 161128267 . G . PASS END=161128279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:30,0 chr1 161128280 . T . PASS END=161128280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 161128281 . G . PASS END=161128282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161129491 . A . PASS END=161129491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:19,0 chr1 161129492 . T . PASS END=161129493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 161129494 . G . PASS END=161129494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 161129495 . C . PASS END=161129495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 161129496 . G . PASS END=161129500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 161129501 . G . PASS END=161129501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 161129502 . T . PASS END=161129502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,673:0,19,255:19,0 chr1 161129503 . G . PASS END=161129503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,733:0,38,255:21,0 chr1 161129504 . G . PASS END=161129506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161129507 . G . PASS END=161129508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 161129509 . G . PASS END=161129509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,678:0,35,255:21,0 chr1 161129510 . C . PASS END=161129521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 161129522 . A . PASS END=161129522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 161129523 . C . PASS END=161129525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 161129526 . C . PASS END=161129556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 161130410 . G . PASS END=161130418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 161130419 . G . PASS END=161130438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:28,0 chr1 161130439 . G . PASS END=161130439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 161130440 . G . PASS END=161130453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1100:0,87,255:33,0 chr1 161130454 . C . PASS END=161130454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:31,0 chr1 161130455 . C . PASS END=161130515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1188:0,89,255:34,0 chr1 161130516 . T . PASS END=161130516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 161130517 . T . PASS END=161130535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1155:0,90,255:30,0 chr1 161130536 . A . PASS END=161130552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:26,0 chr1 161130553 . A . PASS END=161130553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 161130554 . G . PASS END=161130555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 161130556 . C . PASS END=161130556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 161130557 . T . PASS END=161130558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 161130559 . T . PASS END=161130559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:20,0 chr1 161130560 . G . PASS END=161130564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 161130565 . A . PASS END=161130565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 161130566 . A . PASS END=161130569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 161130570 . C . PASS END=161130570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:22,0 chr1 161130571 . C . PASS END=161130577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 161130578 . C . PASS END=161130578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,876:0,39,255:24,0 chr1 161130579 . G . PASS END=161130598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:25,0 chr1 161130599 . G . PASS END=161130599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 161130600 . G . PASS END=161130602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 161130603 . T . PASS END=161130603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 161130604 . G . PASS END=161130610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 161130611 . G . PASS END=161130611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 161130612 . A . PASS END=161130612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 161130613 . A . PASS END=161130613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 161130614 . C . PASS END=161130620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 161130621 . A . PASS END=161130621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:22,0 chr1 161130622 . G . PASS END=161130659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:23,0 chr1 161130660 . G . PASS END=161130660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161130661 . T . PASS END=161130694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,922:0,72,255:26,0 chr1 161130695 . C . PASS END=161130698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 161130699 . T . PASS END=161130700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161130701 . C . PASS END=161130702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161130703 . T . PASS END=161130711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 161130712 . A . PASS END=161130717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 161130718 . A . PASS END=161130719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1066:0,65,255:29,0 chr1 161130720 . C . PASS END=161130727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1012:0,90,255:30,0 chr1 161130728 . T . PASS END=161130728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 161130729 . T . PASS END=161130732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 161130733 . T . PASS END=161130733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1025:0,54,255:30,0 chr1 161130734 . C . PASS END=161130834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1194:0,86,255:35,0 chr1 161130835 . T . PASS END=161130836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 161130837 . G . PASS END=161130840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:28,0 chr1 161130841 . T . PASS END=161130841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161130842 . G . PASS END=161130847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 161130848 . A . PASS END=161130850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 161130851 . C . PASS END=161130851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 161130852 . G . PASS END=161130854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 161130855 . T . PASS END=161130858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 161130859 . C . PASS END=161130864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 161130865 . G . PASS END=161130990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,630:0,40,255:19,0 chr1 161130991 . C . PASS END=161131005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 161131006 . G . PASS END=161131007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 161131008 . C . PASS END=161131020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:10,0 chr1 161131021 . T . PASS END=161131030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 161131828 . G . PASS END=161131887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,101,1800:0,101,255:40,0 chr1 161132060 . T . PASS END=161132167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,83,255:38,0 chr1 161132168 . G . PASS END=161132180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 161132405 . C . PASS END=161132451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,995:0,84,255:40,0 chr1 161132452 . G . PASS END=161132452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:40,0 chr1 161132453 . C . PASS END=161132495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:44:0,85,1501:0,85,255:40,0 chr1 161132496 . T . PASS END=161132496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:37,0 chr1 161132497 . C . PASS END=161132516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1344:0,90,255:40,0 chr1 161132709 . C . PASS END=161132710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 161132711 . A . PASS END=161132711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 161132712 . G . PASS END=161132861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1109:0,80,255:40,0 chr1 161132862 . A . PASS END=161132864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 161133345 . T . PASS END=161133409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:49:0,81,1662:0,81,255:40,0 chr1 161133668 . A . PASS END=161133771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:38:0,87,1305:0,107,255:40,0 chr1 161133954 . A . PASS END=161133954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1182:0,56,255:35,0 chr1 161133955 . A . PASS END=161133956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1364:0,111,255:37,0 chr1 161133957 . G . PASS END=161133960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1110:0,72,255:36,0 chr1 161133961 . T . PASS END=161133962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1335:0,95,255:37,0 chr1 161133963 . G . PASS END=161133963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:34,0 chr1 161133964 . C . PASS END=161134040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:37:0,93,1331:0,93,255:40,0 chr1 161134324 . G . PASS END=161134505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1111:0,87,255:40,0 chr1 161134506 . C . PASS END=161134531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,71,255:26,0 chr1 161134532 . T . PASS END=161134532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 161134533 . G . PASS END=161134553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,770:0,63,255:26,0 chr1 161134554 . C . PASS END=161134557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 161134558 . T . PASS END=161134559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 161134560 . T . PASS END=161134563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 161134564 . G . PASS END=161134566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 161134567 . A . PASS END=161134567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 161134568 . G . PASS END=161134569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 161134570 . A . PASS END=161134570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:22,0 chr1 161134571 . G . PASS END=161134578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr1 161134579 . C . PASS END=161134579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 161134580 . C . PASS END=161134603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:26,0 chr1 161134604 . T . PASS END=161134604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr1 161134605 . G . PASS END=161134616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,922:0,62,255:26,0 chr1 161134617 . G . PASS END=161134620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161134621 . T . PASS END=161134623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 161134624 . G . PASS END=161134653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:31,0 chr1 161134654 . T . PASS END=161134654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:30,0 chr1 161134655 . C . PASS END=161134662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 161134663 . A . PASS END=161134663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 161134664 . A . PASS END=161134672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1157:0,93,255:31,0 chr1 161134673 . T . PASS END=161134674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 161134675 . G . PASS END=161134695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 161134696 . C . PASS END=161134719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,900:0,63,255:26,0 chr1 161134720 . A . PASS END=161134720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 161134721 . G . PASS END=161134727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 161134728 . A . PASS END=161134732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161134819 . G . PASS END=161134827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,980:0,60,255:27,0 chr1 161134828 . T . PASS END=161134828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 161134829 . A . PASS END=161134829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 161134830 . T . PASS END=161134849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1057:0,80,255:33,0 chr1 161134850 . C . PASS END=161134850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 161134851 . A . PASS END=161134871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:34:0,95,1274:0,95,255:36,0 chr1 161134872 . T . PASS END=161134872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:34,0 chr1 161134873 . A . PASS END=161134898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,105,255:37,0 chr1 161134899 . T . PASS END=161134899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:30,0 chr1 161134900 . G . PASS END=161134909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1166:0,85,255:32,0 chr1 161134910 . T . PASS END=161134910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 161134911 . T . PASS END=161134918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1161:0,80,255:30,0 chr1 161134919 . C . PASS END=161134919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 161134920 . T . PASS END=161134922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161134923 . A . PASS END=161134923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 161134924 . A . PASS END=161134924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 161134925 . T . PASS END=161134925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 161134926 . G . PASS END=161134933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:30,0 chr1 161135147 . T . PASS END=161135192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:33,0 chr1 161135193 . G . PASS END=161135219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,856:0,61,255:27,0 chr1 161135220 . C . PASS END=161135220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:20,0 chr1 161135221 . C . PASS END=161135221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 161135222 . A . PASS END=161135236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:20:0,42,630:0,44,255:19,0 chr1 161135237 . A . PASS END=161135237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:27:19:0,27,405:0,57,255:9,0 chr1 161135858 . A . PASS END=161135865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 161135866 . G A, 45.79 PASS DP=18;MQ=250.00;MQRankSum=3.325;ReadPosRankSum=2.482;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,6,0:0.333,0.000:18:6,5,0:6,1,0:45:81,0,50,207,400,607:171,0,255:12,0:4.5793e+01,1.3616e-04,5.3000e+01,2.0655e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,3,3:8,4,4,2 chr1 161135867 . C . PASS END=161135869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:19,0 chr1 161135870 . C . PASS END=161135889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:24,0 chr1 161135890 . T . PASS END=161135890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 161135891 . G . PASS END=161135903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr1 161135904 . C . PASS END=161135935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 161135936 . T . PASS END=161135936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 161135937 . C . PASS END=161135948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,829:0,66,255:22,0 chr1 161135949 . C . PASS END=161135963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,49,255:18,0 chr1 161136220 . G . PASS END=161136220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 161136225 . G . PASS END=161136225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 161136260 . C . PASS END=161136260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161136291 . T . PASS END=161136291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161136297 . A . PASS END=161136297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161136322 . G . PASS END=161136322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 161136630 . G . PASS END=161136638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1096:0,90,255:30,0 chr1 161136639 . T . PASS END=161136639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 161136640 . G . PASS END=161136692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1139:0,83,255:38,0 chr1 161136693 . A . PASS END=161136724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr1 161136737 . C . PASS END=161136737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 161136890 . G . PASS END=161136899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:32:0,82,1149:0,82,255:40,0 chr1 161136900 . T . PASS END=161136900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1496:0,79,255:39,0 chr1 161136901 . G . PASS END=161137024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1249:0,89,255:40,0 chr1 161137131 . T . PASS END=161137143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,116,1800:0,116,255:40,0 chr1 161137145 . G . PASS END=161137277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:40:0,93,1395:0,104,255:40,0 chr1 161137285 . A . PASS END=161137285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:23,0 chr1 161137705 . A . PASS END=161137706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:18,0 chr1 161137707 . G . PASS END=161137708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 161137709 . G . PASS END=161137718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 161137719 . C . PASS END=161137719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161137720 . C . PASS END=161137720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 161137721 . C . PASS END=161137752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:26,0 chr1 161137753 . G . PASS END=161137758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 161137759 . C . PASS END=161137761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161137762 . T . PASS END=161137773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 161137774 . T . PASS END=161137774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr1 161137775 . C . PASS END=161137782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:31,0 chr1 161137783 . A . PASS END=161137783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 161137784 . G . PASS END=161137832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1173:0,88,255:35,0 chr1 161137833 . T . PASS END=161137833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:31,0 chr1 161137834 . G . PASS END=161137857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:32,0 chr1 161137858 . C . PASS END=161137858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 161137859 . G . PASS END=161137865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1133:0,90,255:30,0 chr1 161137866 . A . PASS END=161137866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:27,0 chr1 161137867 . G . PASS END=161137871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 161137872 . T . PASS END=161137872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 161137873 . G . PASS END=161137879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 161137880 . C . PASS END=161137900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,945:0,66,255:23,0 chr1 161137901 . G . PASS END=161137917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:17,0 chr1 161137920 . G . PASS END=161137920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 161138203 . T . PASS END=161138338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1291:0,94,255:40,0 chr1 161138339 . A . PASS END=161138339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:27,0 chr1 161138340 . T . PASS END=161138340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 161138341 . A . PASS END=161138341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:28,0 chr1 161138342 . T . PASS END=161138345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr1 161138346 . T . PASS END=161138363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,945:0,60,255:26,0 chr1 161138364 . C . PASS END=161138365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:24:0,57,855:0,72,255:19,0 chr1 161138366 . G . PASS END=161138366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 161138777 . C . PASS END=161138777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 161138783 . G . PASS END=161138791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 161138792 . C . PASS END=161138792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 161138793 . A . PASS END=161138796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,961:0,65,255:26,0 chr1 161138797 . C . PASS END=161138797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:26,0 chr1 161138798 . C . PASS END=161138804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 161138805 . A . PASS END=161138805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:27,0 chr1 161138806 . G . PASS END=161138964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1011:0,84,255:40,0 chr1 161138965 . C . PASS END=161138965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 161138966 . G . PASS END=161138966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 161138967 . C . PASS END=161138967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161138968 . T . PASS END=161138973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:24,0 chr1 161139450 . G . PASS END=161139458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:31:0,91,1103:0,91,255:36,0 chr1 161139459 . A . PASS END=161139459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1264:0,77,255:35,0 chr1 161139460 . G . PASS END=161139464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1280:0,94,255:36,0 chr1 161139465 . A . PASS END=161139465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr1 161139466 . G . PASS END=161139466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 161139467 . C . PASS END=161139467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 161139468 . A . PASS END=161139490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1395:0,104,255:37,0 chr1 161139491 . T . PASS END=161139491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:30,0 chr1 161139492 . A . PASS END=161139510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1231:0,86,255:34,0 chr1 161139692 . C . PASS END=161139692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 161139696 . T . PASS END=161139807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:33:0,80,1208:0,80,255:38,0 chr1 161139808 . T . PASS END=161139808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr1 161139809 . G . PASS END=161139811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161139812 . C . PASS END=161139814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161140199 . G . PASS END=161140202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:23,0 chr1 161140203 . T . PASS END=161140203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 161140204 . T . PASS END=161140220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:24,0 chr1 161140221 . C . PASS END=161140243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr1 161140244 . G . PASS END=161140244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 161140245 . G . PASS END=161140246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 161140247 . A . PASS END=161140249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:52:30:0,52,1078:0,52,255:29,0 chr1 161140250 . G . PASS END=161140304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1176:0,83,255:35,0 chr1 161140305 . T . PASS END=161140306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 161140307 . A . PASS END=161140309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:27,0 chr1 161140410 . G . PASS END=161140436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,886:0,62,255:26,0 chr1 161140437 . A . PASS END=161140455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1140:0,84,255:32,0 chr1 161140456 . G . PASS END=161140456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 161140457 . T . PASS END=161140555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1136:0,86,255:38,0 chr1 161140556 . C . PASS END=161140559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:70:29:0,70,986:0,70,255:25,0 chr1 161140563 . A . PASS END=161140563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 161140697 . A . PASS END=161140705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr1 161140706 . C . PASS END=161140707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 161140708 . C . PASS END=161140710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 161140711 . G . PASS END=161140734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1241:0,86,255:32,0 chr1 161140735 . A . PASS END=161140735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,999:0,79,255:29,0 chr1 161140736 . C . PASS END=161140742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 161140743 . A . PASS END=161140743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 161140744 . G . PASS END=161140757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1157:0,93,255:31,0 chr1 161140758 . T . PASS END=161140758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr1 161140759 . G . PASS END=161140765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 161140824 . A . PASS END=161140848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:25,0 chr1 161140849 . T . PASS END=161140860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:18,0 chr1 161140861 . C . PASS END=161140878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,807:0,66,255:23,0 chr1 161140879 . C . PASS END=161140893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,668:0,47,255:19,0 chr1 161140894 . T . PASS END=161140894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 161140895 . G . PASS END=161140897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 161140898 . G . PASS END=161140900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 161140901 . A . PASS END=161140901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 161140902 . A . PASS END=161140902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 161140903 . T . PASS END=161140905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,62,255:18,0 chr1 161140906 . C . PASS END=161140906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 161140907 . T . PASS END=161140907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 161140908 . G . PASS END=161140919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,751:0,60,255:20,0 chr1 161140920 . G . PASS END=161140946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr1 161140947 . G . PASS END=161140947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 161140948 . C . PASS END=161140957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 161140958 . A . PASS END=161140963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,630:0,45,255:14,0 chr1 161140964 . T . PASS END=161140964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 161140965 . G . PASS END=161140965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 161140966 . A . PASS END=161140966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161141606 . T . PASS END=161141608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 161141609 . G . PASS END=161141628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 161141629 . T . PASS END=161141683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:26,0 chr1 161141684 . C . PASS END=161141684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161141685 . T . PASS END=161141685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 161141686 . C . PASS END=161141688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 161141689 . G . PASS END=161141689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:28,0 chr1 161141690 . A . PASS END=161141772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1127:0,80,255:35,0 chr1 161141773 . T . PASS END=161141773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1074:0,60,255:28,0 chr1 161141774 . G . PASS END=161141798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1125:0,80,255:35,0 chr1 161141799 . T . PASS END=161141799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1087:0,72,255:32,0 chr1 161141800 . C . PASS END=161141817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:35,0 chr1 161141818 . A . PASS END=161141859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 161141860 . T . PASS END=161141865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr1 161141866 . C . PASS END=161141879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,748:0,65,255:23,0 chr1 161142017 . C . PASS END=161142121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,103,1665:0,103,255:40,0 chr1 161143395 . C . PASS END=161143427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1319:0,95,255:39,0 chr1 161143428 . C . PASS END=161143428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 161143429 . C . PASS END=161143504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1215:0,107,255:40,0 chr1 161143505 . G . PASS END=161143512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:26,0 chr1 161143513 . G . PASS END=161143517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 161143645 . C . PASS END=161143763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,109,1715:0,109,255:40,0 chr1 161143764 . C . PASS END=161143800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:36:0,93,1395:0,108,255:40,0 chr1 161143801 . G A, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=4.440;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,19,0:0.559,0.000:34:3,15,0:12,4,0:48:85,0,49,679,536,1216:255,0,255:13,0:5.0000e+01,7.0928e-05,5.1979e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,8,11:9,6,6,13 chr1 161143802 . T . PASS END=161143811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1101:0,80,255:31,0 chr1 161143812 . T . PASS END=161143812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:29,0 chr1 161143813 . T . PASS END=161143813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161143814 . G . PASS END=161143827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,76,255:29,0 chr1 161143828 . T . PASS END=161143838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 161143839 . C . PASS END=161143839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161144783 . C . PASS END=161144789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,491:0,45,255:17,0 chr1 161144790 . A . PASS END=161144790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 161144791 . T . PASS END=161144803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:17,0 chr1 161144804 . A . PASS END=161144804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 161144805 . T . PASS END=161144831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,599:0,41,255:19,0 chr1 161144832 . G . PASS END=161144840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 161144841 . T . PASS END=161144841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 161144842 . G . PASS END=161144843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:22,0 chr1 161144844 . T . PASS END=161144845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 161144846 . G . PASS END=161144853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 161144854 . G . PASS END=161144854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 161144855 . G . PASS END=161144871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 161144872 . G . PASS END=161144872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 161144873 . G . PASS END=161144917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 161144918 . A . PASS END=161144919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 161144920 . C . PASS END=161144926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 161144927 . G . PASS END=161144929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 161144930 . G . PASS END=161144967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,764:0,66,255:24,0 chr1 161144968 . C . PASS END=161144976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 161144977 . C . PASS END=161144991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 161144992 . G . PASS END=161144992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161144993 . G . PASS END=161144993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161144994 . C . PASS END=161145003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161145004 . C . PASS END=161145004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161145005 . C T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=3.137;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:4,3,0:6,7,0:48:85,0,50,329,358,686:255,0,255:9,0:5.0000e+01,6.5233e-05,5.3000e+01,3.2888e+02,3.9237e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,5,5:6,4,6,4 chr1 161145006 . G . PASS END=161145018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr1 161145598 . C . PASS END=161145602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 161145603 . A . PASS END=161145603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 161145604 . G . PASS END=161145607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,607:0,40,255:18,0 chr1 161145608 . A . PASS END=161145622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:26,0 chr1 161145623 . G . PASS END=161145649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1109:0,87,255:36,0 chr1 161145650 . A . PASS END=161145650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:33,0 chr1 161145651 . C . PASS END=161145653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1341:0,81,255:34,0 chr1 161145654 . C . PASS END=161145655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 161145656 . T . PASS END=161145661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:37:0,87,1317:0,87,255:37,0 chr1 161145662 . C . PASS END=161145662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 161145663 . C . PASS END=161145681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:37:0,80,1327:0,80,255:38,0 chr1 161145682 . T . PASS END=161145682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1396:0,73,255:35,0 chr1 161145683 . A . PASS END=161145761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:40:0,85,1400:0,85,255:40,2 chr1 161145762 . C . PASS END=161145762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1481:0,57,255:34,2 chr1 161145763 . C . PASS END=161145801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,85,255:35,0 chr1 161145802 . C . PASS END=161145802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 161145803 . C . PASS END=161145804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:27,0 chr1 161145805 . C . PASS END=161145816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:25,0 chr1 161145817 . G . PASS END=161145850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 161146639 . A . PASS END=161146639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161146640 . C . PASS END=161146642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161146643 . A . PASS END=161146643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 161146644 . G . PASS END=161146654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 161146655 . A . PASS END=161146655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,790:0,38,255:20,0 chr1 161146656 . G . PASS END=161146659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161146660 . C . PASS END=161146660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:20,0 chr1 161146661 . G . PASS END=161146666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,762:0,66,255:22,0 chr1 161146667 . G A, 39.75 PASS DP=22;MQ=250.00;MQRankSum=3.502;ReadPosRankSum=2.322;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,6,0:0.273,0.000:22:11,2,0:5,4,0:40:75,0,50,207,572,779:158,0,255:16,0:3.9754e+01,4.8125e-04,5.3000e+01,2.0661e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,4,2:9,7,4,2 chr1 161146668 . T . PASS END=161146670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 161146671 . T . PASS END=161146680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:30,0 chr1 161146681 . G . PASS END=161146681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 161146682 . T . PASS END=161146703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1088:0,90,255:35,0 chr1 161146704 . A . PASS END=161146704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:33,0 chr1 161146705 . G . PASS END=161146723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:35,0 chr1 161146724 . C . LowGQ END=161146724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:35:0,0,868:17,0,255:26,0 chr1 161146725 . T . PASS END=161146767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1099:0,88,255:34,0 chr1 161146768 . A . PASS END=161146768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:33,0 chr1 161146769 . G . PASS END=161146774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1241:0,86,255:33,0 chr1 161146775 . G . PASS END=161146775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr1 161146776 . T . PASS END=161146778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1143:0,85,255:32,0 chr1 161146779 . C . PASS END=161146779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:26,0 chr1 161146780 . C . PASS END=161146782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1133:0,82,255:28,0 chr1 161146783 . C . PASS END=161146783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1016:0,49,255:25,0 chr1 161146784 . T . PASS END=161146784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:27,0 chr1 161146785 . G . PASS END=161146789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 161146790 . C . PASS END=161146790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:27,0 chr1 161146791 . T . PASS END=161146791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161146792 . G . PASS END=161146792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 161146793 . T . PASS END=161146799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161146800 . A . PASS END=161146800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr1 161146801 . C . PASS END=161146804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 161146805 . C . PASS END=161146805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 161146806 . C . PASS END=161146806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:24,0 chr1 161146807 . C . PASS END=161146819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,64,255:25,0 chr1 161146820 . A . PASS END=161146820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,901:0,50,255:19,0 chr1 161146821 . G . PASS END=161146824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,80,255:20,0 chr1 161146825 . A . PASS END=161146825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,737:0,28,255:15,0 chr1 161146826 . G . PASS END=161146859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:40:19:0,40,540:0,40,255:19,0 chr1 161146860 . T . PASS END=161146860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:16,0 chr1 161146861 . C . PASS END=161146866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 161146867 . T . PASS END=161146872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,487:0,37,255:13,0 chr1 161147180 . G . PASS END=161147190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,558:0,48,255:17,0 chr1 161147191 . G . PASS END=161147191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 161147192 . A . PASS END=161147197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr1 161147198 . T . PASS END=161147200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 161147201 . C . PASS END=161147201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 161147202 . A . PASS END=161147213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 161147214 . T . PASS END=161147214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 161147215 . G . PASS END=161147234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,63,255:24,0 chr1 161147235 . C . PASS END=161147235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 161147236 . A . PASS END=161147257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,923:0,72,255:25,0 chr1 161147258 . A . PASS END=161147258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 161147259 . G . PASS END=161147264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 161147265 . G . PASS END=161147265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 161147266 . C . PASS END=161147271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 161147272 . C . PASS END=161147272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 161147273 . C . PASS END=161147290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr1 161147291 . T . PASS END=161147313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 161147314 . T . PASS END=161147314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 161147315 . G . PASS END=161147330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 161147331 . G . PASS END=161147347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 161147348 . G . PASS END=161147353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 161160740 . T . PASS END=161160740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 161160741 . C . PASS END=161160747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 161160748 . T . PASS END=161160755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr1 161160756 . C . PASS END=161160764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 161160765 . A . PASS END=161160765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 161160766 . G . PASS END=161160799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,321:0,30,255:12,0 chr1 161160800 . A . PASS END=161160801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 161160802 . G . PASS END=161160829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr1 161160830 . C . PASS END=161160830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 161160831 . C . PASS END=161160834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 161160835 . G . PASS END=161160836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 161160837 . G . PASS END=161160860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 161160861 . A . PASS END=161160861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 161160862 . G . PASS END=161160877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 161160878 . A . PASS END=161160878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 161160879 . G . PASS END=161160905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 161160906 . A . PASS END=161160906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 161160907 . A . PASS END=161160975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,405:0,36,255:13,0 chr1 161160976 . T . PASS END=161160976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 161160977 . G . PASS END=161160986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 161160987 . G . PASS END=161160987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 161160988 . C . PASS END=161160991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 161160992 . C . PASS END=161160993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:18:14:0,18,270:0,42,255:6,0 chr1 161160994 . G . PASS END=161161013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,310:0,24,255:9,0 chr1 161161014 . G . PASS END=161161055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 161161056 . G . PASS END=161161096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:17,0 chr1 161161097 . G . PASS END=161161100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 161161101 . A . PASS END=161161101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161161102 . A . PASS END=161161131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 161161132 . T . PASS END=161161132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161161133 . G . PASS END=161161134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 161161135 . C . PASS END=161161174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 161161175 . G . PASS END=161161190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 161161191 . C . PASS END=161161196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:32,0 chr1 161161197 . T . PASS END=161161197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1107:0,44,255:31,1 chr1 161161198 . G . PASS END=161161199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:33,1 chr1 161161200 . G . PASS END=161161246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1197:0,99,255:35,0 chr1 161161247 . G . PASS END=161161283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1176:0,92,255:35,0 chr1 161161284 . G C, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.078;ReadPosRankSum=3.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,20,0:0.556,0.000:36:7,10,0:9,10,0:48:85,0,49,707,564,1272:255,0,255:16,0:5.0000e+01,7.0669e-05,5.2032e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,8,12:9,7,10,10 chr1 161161285 . G . PASS END=161161321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,92,255:39,0 chr1 161161322 . G . PASS END=161161325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:36:0,72,1080:0,92,255:26,0 chr1 161161326 . G . PASS END=161161332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 161161333 . G . PASS END=161161339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:26,0 chr1 161161340 . T . PASS END=161161341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 161161342 . G . PASS END=161161349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:21,0 chr1 161161350 . C . PASS END=161161352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161161353 . A . PASS END=161161354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 161161855 . C . PASS END=161161883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,894:0,62,255:26,0 chr1 161161884 . G . PASS END=161161885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 161161886 . T . PASS END=161161888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161161889 . A . PASS END=161161981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1225:0,87,255:40,0 chr1 161161982 . G . PASS END=161161982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:29,0 chr1 161161983 . G . PASS END=161161997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1086:0,84,255:30,0 chr1 161161998 . G . PASS END=161162005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:27,0 chr1 161162006 . G . PASS END=161162006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:21,0 chr1 161162007 . G . PASS END=161162018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 161162019 . C . PASS END=161162022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 161162023 . T . PASS END=161162023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:17,0 chr1 161162024 . C . PASS END=161162030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:20:0,46,682:0,46,255:19,0 chr1 161163003 . C . PASS END=161163008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 161163009 . C . PASS END=161163020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:18,0 chr1 161163021 . G . PASS END=161163036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,787:0,69,255:25,0 chr1 161163037 . T C, 47.81 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=2.302;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,10,0:0.400,0.000:25:7,6,0:8,4,0:47:83,0,50,358,536,894:255,0,255:15,0:4.7815e+01,9.3708e-05,5.3000e+01,3.5760e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,7,3:9,6,7,3 chr1 161163038 . G . PASS END=161163044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:26,0 chr1 161163045 . G . PASS END=161163074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,83,255:30,0 chr1 161163075 . C . PASS END=161163078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 161163079 . C . PASS END=161163079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:31,0 chr1 161163080 . C . PASS END=161163104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1127:0,85,255:33,0 chr1 161163105 . G . PASS END=161163105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr1 161163106 . G . PASS END=161163118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 161163119 . T . PASS END=161163119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:28,0 chr1 161163120 . C . PASS END=161163138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 161163139 . T . PASS END=161163160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,917:0,64,255:25,0 chr1 161163161 . C . PASS END=161163171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,810:0,53,255:19,0 chr1 161163172 . G . PASS END=161163173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161163174 . C . PASS END=161163174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 161163175 . A . PASS END=161163175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:19,0 chr1 161163176 . G . PASS END=161163178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161163430 . C . PASS END=161163446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 161163447 . T . PASS END=161163485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:25,0 chr1 161163486 . T . PASS END=161163487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 161163488 . A . PASS END=161163490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161163491 . G . PASS END=161163497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1133:0,80,255:30,0 chr1 161163498 . C . PASS END=161163498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr1 161163499 . C . PASS END=161163502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1156:0,93,255:31,0 chr1 161163503 . A . PASS END=161163503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 161163504 . T . PASS END=161163530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1127:0,93,255:32,0 chr1 161163531 . C . PASS END=161163531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 161163532 . G . PASS END=161163536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 161163537 . G . PASS END=161163550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,70,255:24,0 chr1 161163551 . A . PASS END=161163570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:19,0 chr1 161163571 . A . PASS END=161163571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 161163572 . G . PASS END=161163595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:17,0 chr1 161163596 . C . PASS END=161163602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 161163603 . C . PASS END=161163616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 161163725 . A . PASS END=161163741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,243:0,24,243:9,0 chr1 161163742 . G . PASS END=161163782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,327:0,30,255:13,0 chr1 161163783 . G . PASS END=161163790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr1 161163791 . G . PASS END=161163791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr1 161163792 . G . PASS END=161163795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 161163796 . T . PASS END=161163796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 161163797 . G . PASS END=161163803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161163804 . G . PASS END=161163806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161163807 . C . PASS END=161163821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 161163822 . G . PASS END=161163836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 161163837 . T . PASS END=161163844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 161163845 . G . PASS END=161163847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161163848 . G . PASS END=161163854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161163855 . G . PASS END=161163865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr1 161163866 . G . PASS END=161163866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 161163867 . G . PASS END=161163867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 161163868 . C . PASS END=161163868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 161163869 . A . PASS END=161163880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,917:0,75,255:25,0 chr1 161163881 . C . PASS END=161163881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 161163882 . G . PASS END=161163936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 161163937 . C . PASS END=161163982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:18,0 chr1 161163983 . A . PASS END=161163992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,520:0,31,255:13,0 chr1 161163993 . T . PASS END=161164006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:9:0,21,315:0,23,255:9,0 chr1 161164007 . G . PASS END=161164011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 161165255 . C . PASS END=161165425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1305:0,104,255:40,0 chr1 161165961 . C . PASS END=161165961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:32,0 chr1 161165962 . C . PASS END=161165962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:32,0 chr1 161165963 . A . PASS END=161165963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1125:0,82,255:32,0 chr1 161165964 . G . PASS END=161165965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1202:0,42,255:36,0 chr1 161165966 . T . PASS END=161165974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1316:0,81,255:38,0 chr1 161165975 . G . PASS END=161165975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1355:0,70,255:37,0 chr1 161165976 . C . PASS END=161165978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1388:0,81,255:39,0 chr1 161165979 . T . PASS END=161165979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1351:0,73,255:35,0 chr1 161165980 . G . PASS END=161165982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:41:0,92,1475:0,92,255:37,0 chr1 161165983 . G . PASS END=161165983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1350:0,68,255:35,0 chr1 161165984 . G . PASS END=161165989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,105,1482:0,107,255:36,0 chr1 161165990 . T . PASS END=161165990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1288:0,59,255:35,0 chr1 161165991 . G . PASS END=161166093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:35:0,81,1288:0,81,255:39,0 chr1 161166284 . C . PASS END=161166524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:31:0,81,1166:0,86,255:40,0 chr1 161166525 . T . PASS END=161166525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr1 161166526 . T . PASS END=161166539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr1 161166540 . T . PASS END=161166540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr1 161166541 . G . PASS END=161166545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 161166546 . A . PASS END=161166589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,67,255:26,0 chr1 161166590 . T . PASS END=161166590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161166591 . A . PASS END=161166594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161166595 . C . PASS END=161166595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 161166596 . C . PASS END=161166598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161166599 . A . PASS END=161166600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr1 161166601 . C . PASS END=161166603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161166604 . G . PASS END=161166604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 161166605 . G . PASS END=161166606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161166607 . A . PASS END=161166624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 161166625 . C . PASS END=161166625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 161166626 . T . PASS END=161166660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:16:0,40,615:0,40,255:19,0 chr1 161166661 . A . PASS END=161166665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 161166666 . A . PASS END=161166666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 161166667 . A . PASS END=161166670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161167785 . C . PASS END=161167785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 161167786 . T . PASS END=161167786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 161167787 . T . PASS END=161167789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 161167790 . C . PASS END=161167790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 161167791 . T . PASS END=161167791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 161167792 . C . PASS END=161167792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:21,0 chr1 161167793 . T . PASS END=161167794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr1 161167795 . C . PASS END=161167806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,856:0,69,255:24,0 chr1 161167807 . C . PASS END=161167807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 161167808 . T . PASS END=161167812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 161167813 . C . PASS END=161167813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 161167814 . T . PASS END=161167822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 161167823 . G . PASS END=161167823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 161167824 . A . PASS END=161167844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,878:0,72,255:24,0 chr1 161167845 . A . PASS END=161167845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 161167846 . C . PASS END=161167856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr1 161167857 . G . PASS END=161167857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 161167858 . G . PASS END=161167883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 161167884 . A . PASS END=161167909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,607:0,40,255:19,0 chr1 161167910 . G . PASS END=161167925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,495:0,32,255:13,0 chr1 161167926 . G . PASS END=161167926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,418:0,8,255:10,0 chr1 161167927 . G . PASS END=161167941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 161167942 . T . PASS END=161167942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 161167943 . C . PASS END=161167958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:12,0 chr1 161167959 . T . PASS END=161167959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 161167960 . A . PASS END=161167977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,433:0,36,255:13,0 chr1 161167978 . C . PASS END=161168010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 161168011 . G . PASS END=161168016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 161168017 . C . PASS END=161168078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:18,0 chr1 161168079 . G . PASS END=161168079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 161168080 . C . PASS END=161168085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 161168086 . T . PASS END=161168086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 161168087 . A . PASS END=161168091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 161168092 . A . PASS END=161168093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 161168094 . T . PASS END=161168130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,584:0,41,255:19,0 chr1 161168131 . A . PASS END=161168131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:18,0 chr1 161168132 . G . PASS END=161168134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 161168135 . C . PASS END=161168135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,672:0,30,255:18,0 chr1 161168136 . T . PASS END=161168136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161168137 . A . PASS END=161168137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,654:0,24,255:19,0 chr1 161168138 . G . PASS END=161168139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161168140 . A . PASS END=161168140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 161168141 . G . PASS END=161168141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161168142 . C . PASS END=161168143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,668:0,43,255:19,0 chr1 161168144 . G . PASS END=161168145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 161168146 . G . PASS END=161168147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 161168148 . C . PASS END=161168151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 161168152 . C . PASS END=161168152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 161168153 . C . PASS END=161168153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 161168154 . A . PASS END=161168154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 161168155 . A . PASS END=161168157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 161168158 . G . PASS END=161168158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 161168159 . C . PASS END=161168162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 161168163 . C . PASS END=161168163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:18,0 chr1 161168164 . A . PASS END=161168164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 161168165 . A . PASS END=161168165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161168166 . G . PASS END=161168168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 161168169 . G . PASS END=161168169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,665:0,16,255:17,0 chr1 161168170 . C . PASS END=161168176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,731:0,49,255:18,0 chr1 161168177 . G . PASS END=161168177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:19,0 chr1 161168178 . C . PASS END=161168183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:18,0 chr1 161168184 . A . PASS END=161168184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,507:0,24,255:16,0 chr1 161168185 . G . PASS END=161168187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 161168188 . G . PASS END=161168189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:21:18:0,21,460:0,21,255:15,0 chr1 161168190 . G . LowGQ END=161168190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,541:15,0,255:15,0 chr1 161168191 . C . PASS END=161168200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:17,0 chr1 161168201 . G . PASS END=161168201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,652:0,29,255:14,0 chr1 161168202 . C . PASS END=161168212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:16,0 chr1 161168213 . C . PASS END=161168213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 161168214 . G . PASS END=161168219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:18,0 chr1 161168220 . C . PASS END=161168220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 161168221 . T . PASS END=161168222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,652:0,54,255:19,0 chr1 161168223 . C . PASS END=161168224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 161168225 . C . PASS END=161168231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 161168232 . C . PASS END=161168232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161168233 . A . PASS END=161168237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 161168238 . C . PASS END=161168251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,756:0,60,255:22,0 chr1 161168252 . G . PASS END=161168252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 161168253 . G . PASS END=161168275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,711:0,66,255:22,0 chr1 161168276 . A . PASS END=161168276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 161168277 . G . PASS END=161168291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 161168292 . C . PASS END=161168292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 161168293 . A . PASS END=161168295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:24:0,68,992:0,68,255:27,0 chr1 161168296 . A . PASS END=161168296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 161168297 . G . PASS END=161168297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 161168298 . T . PASS END=161168305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 161168306 . G . PASS END=161168312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1037:0,71,255:26,0 chr1 161168313 . C . PASS END=161168314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161168315 . C . PASS END=161168326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:26,0 chr1 161168327 . G . PASS END=161168327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:25,0 chr1 161168328 . C . PASS END=161168337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 161168338 . G . PASS END=161168338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:27,0 chr1 161168339 . G . PASS END=161168346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 161168347 . A . PASS END=161168381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,923:0,62,255:26,0 chr1 161168382 . C . PASS END=161168382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 161168383 . A . PASS END=161168403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,917:0,75,255:26,0 chr1 161168404 . C . PASS END=161168417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:19:0,48,720:0,55,255:19,0 chr1 161169165 . G . PASS END=161169165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 161169207 . G . PASS END=161169207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 161169255 . C . PASS END=161169255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 161171953 . C . PASS END=161171953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 161171958 . G . PASS END=161171958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 161172017 . C . PASS END=161172017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,913:0,62,255:20,0 chr1 161172020 . G . PASS END=161172020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 161172148 . C . PASS END=161172148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 161172156 . C . PASS END=161172156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 161172176 . A . PASS END=161172181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:26,0 chr1 161172182 . G . PASS END=161172192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1024:0,81,255:32,0 chr1 161172193 . T . PASS END=161172193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr1 161172194 . T . PASS END=161172195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr1 161172196 . G . PASS END=161172232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1178:0,96,255:37,0 chr1 161172233 . C A, 46.31 PASS DP=38;MQ=250.00;MQRankSum=5.137;ReadPosRankSum=2.986;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,15,0:0.395,0.000:38:12,11,0:11,4,0:45:81,0,50,536,822,1359:255,0,255:22,0:4.6313e+01,1.2322e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,9,6:15,8,7,8 chr1 161172234 . C . PASS END=161172270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1247:0,86,255:37,0 chr1 161172284 . C . PASS END=161172284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 161173227 . A . PASS END=161173332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:38:0,87,1382:0,87,255:40,0 chr1 161173333 . G . PASS END=161173333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:33,0 chr1 161176197 . A . PASS END=161176206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:26,0 chr1 161176207 . T . PASS END=161176209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 161176210 . A . PASS END=161176210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:27,0 chr1 161176211 . A . PASS END=161176211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 161176212 . A . PASS END=161176212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 161176213 . G . PASS END=161176214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 161176215 . A . PASS END=161176215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 161176216 . C . PASS END=161176221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1001:0,84,255:31,0 chr1 161176222 . T . PASS END=161176222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:30,0 chr1 161176223 . G . PASS END=161176345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1097:0,80,255:40,0 chr1 161176346 . C . PASS END=161176350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161176351 . C . PASS END=161176351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161176352 . A . PASS END=161176357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 161176358 . A . PASS END=161176358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,878:0,32,255:25,0 chr1 161176359 . A . PASS END=161176377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 161176378 . C . PASS END=161176387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,775:0,50,255:19,0 chr1 161176392 . G . PASS END=161176392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 161178983 . G . PASS END=161179103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:40:0,95,1504:0,95,255:40,0 chr1 161179114 . C . PASS END=161179114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 161179270 . C . PASS END=161179270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 161179273 . T . PASS END=161179275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1236:0,94,255:35,0 chr1 161179276 . T . PASS END=161179276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:34,0 chr1 161179277 . G . PASS END=161179317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:35:0,80,1187:0,80,255:36,0 chr1 161179318 . T . PASS END=161179318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:33,0 chr1 161179319 . G . PASS END=161179337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1276:0,83,255:35,0 chr1 161179338 . C . PASS END=161179338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1184:0,61,255:32,0 chr1 161179339 . T . PASS END=161179367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1107:0,85,255:36,0 chr1 161179368 . T . PASS END=161179368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,972:0,79,255:30,0 chr1 161179369 . T . PASS END=161179376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 161179377 . A . PASS END=161179377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 161179378 . G . PASS END=161179378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 161179379 . G . PASS END=161179384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,80,255:25,0 chr1 161179385 . G . PASS END=161179385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 161179635 . C . PASS END=161179635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161179647 . A . PASS END=161179649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 161179650 . T . PASS END=161179650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1050:0,69,255:31,0 chr1 161179651 . T . PASS END=161179721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,89,255:38,0 chr1 161179733 . C . PASS END=161179733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161179890 . T . PASS END=161179890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1172:0,85,255:32,0 chr1 161179901 . G . PASS END=161179914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:40:0,88,1465:0,88,255:40,0 chr1 161179915 . G . PASS END=161179969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:38:0,82,1300:0,82,255:40,0 chr1 161179970 . T . PASS END=161179970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1287:0,65,255:35,0 chr1 161179971 . T . PASS END=161179978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1395:0,81,255:36,0 chr1 161180090 . A . PASS END=161180090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 161180094 . T . PASS END=161180179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,117,1755:0,122,255:40,0 chr1 161180187 . G . PASS END=161180187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 161180381 . T . PASS END=161180497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1243:0,84,255:40,0 chr1 161180498 . T . PASS END=161180500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 161182141 . G . PASS END=161182270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1133:0,87,255:40,0 chr1 161183170 . A . PASS END=161183172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161183173 . T . PASS END=161183173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 161183174 . C . PASS END=161183183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr1 161183184 . A . PASS END=161183184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 161183185 . C . PASS END=161183252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,839:0,62,255:25,0 chr1 161183253 . T . PASS END=161183254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161183255 . A . PASS END=161183255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161183256 . G . PASS END=161183256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 161183257 . G . PASS END=161183261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 161183262 . C . PASS END=161183265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,810:0,53,255:19,0 chr1 161183272 . A . PASS END=161183272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161183428 . T . PASS END=161183428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 161183439 . G . PASS END=161183522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1169:0,80,255:40,0 chr1 161183654 . G . PASS END=161183731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,130,255:40,0 chr1 161183942 . C . PASS END=161183942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr1 161183946 . G . PASS END=161183983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,197,255:40,0 chr1 161184170 . G . PASS END=161184170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 161184875 . A G, 44.09 PASS DP=37;MQ=249.08;MQRankSum=4.183;ReadPosRankSum=-0.461;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,13,0:0.361,0.000:36:11,4,0:12,9,0:44:79,0,50,464,786,1250:255,0,255:22,0:4.4086e+01,1.9130e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,7,6:12,11,4,9 chr1 161185112 . A . PASS END=161185160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,130,255:40,0 chr1 161187776 . C . PASS END=161187867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:29:0,85,1080:0,85,255:40,0 chr1 161188031 . A . PASS END=161188066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,151,255:40,0 chr1 161188493 . A . PASS END=161188513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,142,255:40,0 chr1 161188671 . G . PASS END=161188692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:97:46:0,97,1637:0,97,255:40,0 chr1 161188693 . A . PASS END=161188693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1670:0,78,255:40,0 chr1 161188694 . G . PASS END=161188733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:44:0,114,1552:0,114,255:40,0 chr1 161192195 . T . PASS END=161192312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,157,255:40,0 chr1 161192707 . C . PASS END=161192795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:34:0,99,1358:0,102,255:40,0 chr1 161192796 . G . PASS END=161192815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:40:0,97,1530:0,97,255:40,0 chr1 161192816 . T . PASS END=161192816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1187:0,48,255:33,0 chr1 161192817 . T . PASS END=161192829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:36:0,84,1327:0,84,255:35,0 chr1 161192830 . A . PASS END=161192830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:29,0 chr1 161192831 . A . PASS END=161192831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 161192832 . C . PASS END=161192832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1219:0,69,255:30,0 chr1 161192833 . C . PASS END=161192838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,91,255:28,0 chr1 161192839 . T . PASS END=161192840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 161192845 . CCACACACACACA C, 46.36 PASS DP=36;MQ=248.30;MQRankSum=2.872;ReadPosRankSum=-0.032;FractionInformativeReads=0.639;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:9,1,0:6,7,0:45:49,0,47,149,149,149:99,0,255:7,8:4.6356e+01,1.4393e-04,5.0000e+01,1.8113e+02,1.8413e+02,1.8414e+02:0.00,3.00,6.01,34.77,37.77,37.78:8,7,2,6:6,9,7,1 chr1 161192890 . T . PASS END=161192890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 161192891 . C . PASS END=161192893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr1 161192894 . C . PASS END=161192895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161192896 . G . PASS END=161192902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:40:30:0,40,890:0,40,255:27,0 chr1 161192903 . C . PASS END=161192904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:26,0 chr1 161192905 . G . PASS END=161192905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 161192906 . C . PASS END=161192906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:26,0 chr1 161192907 . A . PASS END=161192907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,907:0,10,255:25,0 chr1 161192908 . G . PASS END=161192918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,970:0,67,255:26,0 chr1 161192919 . C . PASS END=161192920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 161192921 . T . PASS END=161192929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 161192930 . A . PASS END=161192931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161192932 . C . PASS END=161192960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr1 161192961 . C . PASS END=161192961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 161192962 . C . PASS END=161192967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 161192968 . C . PASS END=161192971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161192972 . A . PASS END=161192972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 161192973 . A . PASS END=161192974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161192975 . G . PASS END=161192975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,856:0,64,255:26,0 chr1 161192976 . G . PASS END=161192976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 161192977 . T . PASS END=161192977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:27,0 chr1 161192978 . A . PASS END=161192981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 161192982 . A . PASS END=161192982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 161192983 . G . PASS END=161192987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr1 161192988 . A . PASS END=161192988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:29,0 chr1 161192989 . T . PASS END=161192995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1021:0,90,255:30,0 chr1 161192996 . A . PASS END=161193012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,65,255:24,0 chr1 161193013 . T . PASS END=161193017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,56,255:19,0 chr1 161193018 . A . PASS END=161193018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,703:0,38,255:18,0 chr1 161193019 . G . PASS END=161193035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,832:0,65,255:24,0 chr1 161193036 . T . PASS END=161193036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 161193037 . G . PASS END=161193056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,917:0,72,255:25,0 chr1 161193140 . C . PASS END=161193141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr1 161193142 . T . PASS END=161193142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 161193143 . C . PASS END=161193152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1038:0,87,255:32,0 chr1 161193153 . G . PASS END=161193153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:31,0 chr1 161193154 . A . PASS END=161193179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1217:0,86,255:35,0 chr1 161193180 . G . PASS END=161193180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 161193181 . A . PASS END=161193215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,88,255:36,0 chr1 161193292 . C . PASS END=161193366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:41:0,93,1480:0,93,255:40,0 chr1 161196280 . A . PASS END=161196289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,513:0,45,255:18,0 chr1 161196290 . C . PASS END=161196305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,778:0,66,255:24,0 chr1 161196306 . A . PASS END=161196306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 161196307 . A . PASS END=161196308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:24,0 chr1 161196309 . G . PASS END=161196309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:23,0 chr1 161196310 . G . PASS END=161196321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,795:0,72,255:24,0 chr1 161196322 . C . PASS END=161196322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 161196323 . G . PASS END=161196324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 161196325 . C . PASS END=161196325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 161196326 . G . PASS END=161196328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 161196329 . G . PASS END=161196329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 161196330 . C . PASS END=161196339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 161196340 . G . PASS END=161196341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,779:0,56,255:23,0 chr1 161196342 . G . PASS END=161196347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 161196348 . C . PASS END=161196348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:19,0 chr1 161196349 . C . PASS END=161196349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 161196350 . T . PASS END=161196350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 161196351 . G . PASS END=161196351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 161196352 . C . PASS END=161196359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,55,255:19,0 chr1 161196360 . T . PASS END=161196360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,715:0,35,255:18,0 chr1 161196361 . G . PASS END=161196370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,674:0,44,255:19,0 chr1 161196371 . A . PASS END=161196371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 161196372 . T . PASS END=161196376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,647:0,46,255:19,0 chr1 161196377 . T . PASS END=161196392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 161196393 . A . PASS END=161196393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,556:0,43,255:19,0 chr1 161196394 . G . PASS END=161196394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 161196678 . A . PASS END=161196681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,864:0,75,255:26,0 chr1 161196682 . A . PASS END=161196685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 161196686 . C . PASS END=161196686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 161196687 . C . PASS END=161196706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:30,0 chr1 161196707 . A . PASS END=161196707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 161196708 . A . PASS END=161196712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161196713 . G . PASS END=161196713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr1 161196714 . T . PASS END=161196719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 161196720 . A . PASS END=161196720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 161196721 . C . PASS END=161196727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 161196728 . C . PASS END=161196745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 161197048 . G . PASS END=161197049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 161197050 . G . PASS END=161197064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:27,0 chr1 161197065 . C . PASS END=161197067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:30:0,54,1063:0,54,255:28,0 chr1 161197068 . G . PASS END=161197068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161197069 . A . PASS END=161197069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 161197070 . G . PASS END=161197070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161197071 . T . PASS END=161197071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr1 161197072 . G . PASS END=161197072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161197073 . C . PASS END=161197073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:28,0 chr1 161197074 . C . PASS END=161197074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 161197075 . C . PASS END=161197075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:28,0 chr1 161197076 . T . PASS END=161197076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 161197077 . G . PASS END=161197079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 161197080 . C . PASS END=161197082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1055:0,60,255:29,0 chr1 161197083 . G . PASS END=161197083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr1 161197084 . C . PASS END=161197084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,1008:0,21,255:28,0 chr1 161197085 . C . PASS END=161197085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 161197086 . G . PASS END=161197088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:31,0 chr1 161197089 . A . PASS END=161197089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 161197090 . T . PASS END=161197090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:29,0 chr1 161197091 . A . PASS END=161197093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 161197094 . A . PASS END=161197094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1000:0,38,255:29,0 chr1 161197095 . C . PASS END=161197095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1192:0,83,255:32,0 chr1 161197096 . C . PASS END=161197097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:60:33:0,60,1100:0,60,255:32,0 chr1 161197098 . C . PASS END=161197098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:32,0 chr1 161197099 . C . PASS END=161197100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 161197101 . T . PASS END=161197102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1073:0,82,255:32,0 chr1 161197103 . C . PASS END=161197103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:31,0 chr1 161197104 . G . PASS END=161197105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 161197106 . C . PASS END=161197106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:31,0 chr1 161197107 . C . PASS END=161197108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:30,0 chr1 161197109 . A . PASS END=161197109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr1 161197110 . T . PASS END=161197111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1133:0,82,255:32,0 chr1 161197112 . C . PASS END=161197112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1102:0,52,255:30,0 chr1 161197113 . A . PASS END=161197113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1113:0,68,255:30,0 chr1 161197114 . G . PASS END=161197118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:29,0 chr1 161197119 . T . PASS END=161197119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1058:0,65,255:28,0 chr1 161197120 . T . PASS END=161197123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:28,0 chr1 161197124 . A . PASS END=161197124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 161197125 . G . PASS END=161197125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161197126 . C . PASS END=161197127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 161197128 . C . PASS END=161197128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:25,0 chr1 161197129 . A . PASS END=161197134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,931:0,67,255:26,0 chr1 161197135 . A . PASS END=161197135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 161197136 . C . PASS END=161197136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:24,0 chr1 161197137 . T . PASS END=161197137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:24,0 chr1 161197138 . G . PASS END=161197140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:24,0 chr1 161197426 . G . PASS END=161197489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1209:0,84,255:40,0 chr1 161197490 . T . PASS END=161197490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:72:50:0,72,1624:0,72,255:40,0 chr1 161197491 . C . PASS END=161197527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:88:46:0,88,1532:0,88,255:40,0 chr1 161197674 . A . PASS END=161197779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,99,1530:0,99,255:40,0 chr1 161197976 . T . PASS END=161198068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1202:0,86,255:37,0 chr1 161198069 . C . PASS END=161198069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:31,0 chr1 161198070 . C . PASS END=161198082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1208:0,94,255:37,0 chr1 161198083 . G . PASS END=161198083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 161198084 . C . PASS END=161198098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1296:0,94,255:37,0 chr1 161198218 . C . PASS END=161198224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:44:0,116,1604:0,116,255:40,0 chr1 161198225 . C . PASS END=161198294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:47:0,108,1643:0,108,255:40,0 chr1 161198505 . G . PASS END=161198607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,141,255:40,0 chr1 161198746 . G . PASS END=161198885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:37:0,90,1485:0,90,255:40,2 chr1 161199472 . T . PASS END=161199562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:37:0,98,1313:0,98,255:40,0 chr1 161199587 . T . PASS END=161199618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:34,0 chr1 161199619 . T . PASS END=161199620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr1 161199621 . G . PASS END=161199621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161199622 . C . PASS END=161199622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161199623 . A . PASS END=161199626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161199627 . A . PASS END=161199627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161199628 . G . PASS END=161199669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1149:0,82,255:32,0 chr1 161199670 . T . PASS END=161199685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr1 161199686 . C . PASS END=161199687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 161199688 . G . PASS END=161199692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 161199693 . C . PASS END=161199693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 161199694 . C . PASS END=161199698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 161199699 . A . PASS END=161199699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 161199700 . A . PASS END=161199702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,724:0,66,255:22,0 chr1 161199703 . T . PASS END=161199703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 161199704 . C . PASS END=161199716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr1 161200539 . T . PASS END=161200548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,100,1698:0,100,255:40,0 chr1 161200549 . A . PASS END=161200585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,141,255:40,0 chr1 161200586 . T G, 50.00 PASS DP=55;MQ=250.00;MQRankSum=6.258;ReadPosRankSum=3.403;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,30,0:0.556,0.000:54:11,17,0:13,13,0:48:85,0,49,1073,850,1923:255,0,255:23,0:5.0000e+01,7.1187e-05,5.1924e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,18,12:12,12,15,15 chr1 161200587 . C . PASS END=161200623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,145,255:40,0 chr1 161200624 . T . PASS END=161200723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,123,255:40,0 chr1 161200818 . C . PASS END=161201034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,118,1800:0,118,255:40,0 chr1 161201035 . A . PASS END=161201035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:64:53:0,64,1692:0,64,255:40,0 chr1 161201096 . C . PASS END=161201254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:46:0,93,1395:0,110,255:40,0 chr1 161201255 . G . PASS END=161201263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:42:0,84,1260:0,90,255:31,0 chr1 161201264 . A . PASS END=161201264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:38:0,72,1080:0,114,255:24,0 chr1 161202597 . C . PASS END=161202599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1143:0,93,255:32,0 chr1 161202600 . A . PASS END=161202601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr1 161202602 . G . PASS END=161202604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1051:0,99,255:33,0 chr1 161202605 . G A, 49.48 PASS DP=33;MQ=250.00;MQRankSum=4.863;ReadPosRankSum=1.754;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,15,0:0.455,0.000:33:8,8,0:10,7,0:48:84,0,50,529,607,1135:255,0,255:18,0:4.9480e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,8,7:7,11,7,8 chr1 161202606 . G . PASS END=161202642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1234:0,95,255:40,0 chr1 161202643 . T . PASS END=161202736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:37:0,87,1305:0,87,255:40,0 chr1 161202959 . C . PASS END=161202959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 161202960 . C . PASS END=161202960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 161202961 . T . PASS END=161202961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 161202962 . A . PASS END=161202962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 161202963 . A . PASS END=161202963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 161202964 . A . PASS END=161202964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,377:0,28,255:12,0 chr1 161202965 . C . PASS END=161202967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,427:0,39,255:13,0 chr1 161202968 . C . PASS END=161202968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 161202969 . A . PASS END=161202973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 161202974 . C . PASS END=161202975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161202976 . G . PASS END=161202976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161202977 . T . PASS END=161202977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 161202978 . T . PASS END=161202978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161202979 . C . PASS END=161202982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 161202983 . C . PASS END=161202983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 161202984 . A . PASS END=161202984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 161202985 . T . PASS END=161203001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,584:0,41,255:19,0 chr1 161203002 . G . PASS END=161203050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,825:0,66,255:25,0 chr1 161203051 . G . PASS END=161203051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 161203052 . T . PASS END=161203053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161203054 . G . PASS END=161203055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161203056 . A . PASS END=161203072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,962:0,68,255:26,0 chr1 161203073 . C . PASS END=161203074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161203075 . G . PASS END=161203075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 161203076 . C . PASS END=161203078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161203079 . C . PASS END=161203081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161203082 . G . PASS END=161203083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161203084 . C . PASS END=161203092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 161203093 . C . PASS END=161203093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 161203094 . T . PASS END=161203105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:25,0 chr1 161203106 . C . PASS END=161203106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 161203107 . A . PASS END=161203114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:23,0 chr1 161203115 . T . PASS END=161203115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 161203116 . G . PASS END=161203126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,922:0,72,255:24,0 chr1 161203127 . C . PASS END=161203128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 161203227 . G . PASS END=161203227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 161204217 . A . PASS END=161204217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 161204538 . C . PASS END=161204538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 161205637 . T . PASS END=161205637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 161205638 . G . PASS END=161205651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 161205652 . C . PASS END=161205664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 161205665 . C . PASS END=161205683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 161205684 . G . PASS END=161205751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 161205752 . T . PASS END=161205761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 161205762 . G . PASS END=161205767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 161206249 . C . PASS END=161206355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:40:0,80,1451:0,80,255:40,0 chr1 161207831 . C . PASS END=161208025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:39:0,96,1381:0,101,255:40,0 chr1 161208026 . T . PASS END=161208026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:35,0 chr1 161208027 . G . PASS END=161208043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,95,255:35,0 chr1 161208044 . A . PASS END=161208044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 161208045 . C . PASS END=161208055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,986:0,81,255:27,0 chr1 161208056 . G . PASS END=161208058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161208059 . C . PASS END=161208059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161208060 . A . PASS END=161208095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,885:0,67,255:26,0 chr1 161208096 . A . PASS END=161208098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,61,255:19,0 chr1 161208099 . G . PASS END=161208103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161208104 . T . PASS END=161208130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:20:0,42,630:0,47,255:18,0 chr1 161208131 . T . PASS END=161208131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:13,0 chr1 161208132 . G . PASS END=161208133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 161208134 . G . PASS END=161208147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 161208148 . A . PASS END=161208148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 161208149 . C . PASS END=161208151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr1 161208152 . A . PASS END=161208152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 161208153 . T . PASS END=161208153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 161228765 . A . PASS END=161228773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1006:0,68,255:24,0 chr1 161229032 . A . PASS END=161229049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,117,1755:0,129,255:40,0 chr1 161253458 . C . PASS END=161253458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1402:0,73,255:38,0 chr1 161253459 . T . PASS END=161253512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,111,1363:0,111,255:40,0 chr1 161254129 . G . PASS END=161254271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:35:0,93,1395:0,104,255:40,0 chr1 161274084 . T . PASS END=161274131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:86:0,120,1800:0,217,255:40,0 chr1 161274592 . T . PASS END=161274592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 161274618 . T . PASS END=161274618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 161274646 . C . PASS END=161274646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,172:2,0 chr1 161274712 . G . LowGQ END=161274712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,3:4:0:4:0,0,0:74,0,27:1,0 chr1 161274763 . C . PASS END=161274763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 161274808 . A . PASS END=161274808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr1 161274914 . C . PASS END=161274914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1410:0,101,255:37,0 chr1 161274923 . G . PASS END=161274923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 161274985 . T . PASS END=161274985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 161275144 . G . PASS END=161275144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 161275231 . A . PASS END=161275231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 161275297 . G . PASS END=161275297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161275306 . G . PASS END=161275306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161275325 . T . PASS END=161275325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 161275415 . G . PASS END=161275415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 161275471 . C . PASS END=161275471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:27,0 chr1 161275474 . T . PASS END=161275475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 161275476 . A . PASS END=161275476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:28,0 chr1 161275477 . C . PASS END=161275477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 161275478 . T . PASS END=161275478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 161275479 . T . PASS END=161275479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 161275480 . G . PASS END=161275486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 161275487 . T . PASS END=161275487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:28,0 chr1 161275488 . T . PASS END=161275493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 161275494 . C . PASS END=161275494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:30,0 chr1 161275495 . C . PASS END=161275498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 161275499 . A . PASS END=161275499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:30,0 chr1 161275500 . T . PASS END=161275513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 161275514 . T . PASS END=161275514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr1 161275515 . T . PASS END=161275515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 161275516 . T . PASS END=161275516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 161275517 . T . PASS END=161275520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161275521 . G . PASS END=161275536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 161275537 . G . PASS END=161275537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161275538 . G . PASS END=161275565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr1 161275566 . T . PASS END=161275566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:21,0 chr1 161275567 . C . PASS END=161275590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,847:0,69,255:24,0 chr1 161275591 . C . PASS END=161275623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 161275624 . C . PASS END=161275626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 161275627 . C . PASS END=161275703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,631:0,40,255:19,0 chr1 161275704 . C . PASS END=161275705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:15,0 chr1 161275706 . T . PASS END=161275715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,584:0,40,255:19,0 chr1 161275716 . T . PASS END=161275716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,584:0,18,255:18,0 chr1 161275717 . G . PASS END=161275723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,623:0,57,255:19,0 chr1 161275724 . T . PASS END=161275724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:18,0 chr1 161275725 . T . PASS END=161275727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,592:0,40,255:19,0 chr1 161275728 . T . PASS END=161275729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 161275730 . C . PASS END=161275730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 161275731 . T . PASS END=161275739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,717:0,60,255:21,0 chr1 161275740 . G . PASS END=161275740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 161275741 . G . PASS END=161275745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 161275746 . G . PASS END=161275746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:18,0 chr1 161275747 . C . PASS END=161275747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 161275748 . A . PASS END=161275750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,820:0,53,255:19,0 chr1 161275751 . G . PASS END=161275759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 161275760 . A . PASS END=161275760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:21,0 chr1 161275761 . C . PASS END=161275761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 161275762 . T . PASS END=161275764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 161275765 . C . PASS END=161275765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 161275766 . G . PASS END=161275767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 161275770 . G . PASS END=161275770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161275772 . G . PASS END=161275772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161275774 . G . PASS END=161275774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161275894 . T . PASS END=161275894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 161275897 . C . PASS END=161275905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 161275906 . C . PASS END=161275906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 161275907 . G . PASS END=161275912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161275913 . C . PASS END=161275913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 161275914 . G . PASS END=161275914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161275915 . A . PASS END=161275915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:28,0 chr1 161275916 . C . PASS END=161275920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1113:0,93,255:31,0 chr1 161275921 . C . PASS END=161275921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 161275922 . C . PASS END=161275936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1202:0,83,255:33,0 chr1 161275937 . C . PASS END=161275937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:30,0 chr1 161275938 . A . PASS END=161275947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 161275948 . T . PASS END=161275948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1033:0,41,255:26,0 chr1 161275949 . C . PASS END=161275953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 161275954 . T . PASS END=161275954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:24,0 chr1 161275955 . A . PASS END=161275958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 161275960 . T . PASS END=161275960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161275962 . C . PASS END=161275962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161276116 . T . PASS END=161276117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161276119 . C . PASS END=161276119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 161276120 . T . PASS END=161276120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,955:0,35,255:27,0 chr1 161276121 . G . PASS END=161276190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:32,0 chr1 161276191 . A . PASS END=161276194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 161276195 . G . PASS END=161276195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1019:0,54,255:26,0 chr1 161276196 . C . PASS END=161276196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161276197 . A . PASS END=161276197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 161276198 . C . PASS END=161276198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161276199 . C . PASS END=161276220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 161276221 . A . PASS END=161276249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,415:0,42,255:19,0 chr1 161276250 . T . PASS END=161276253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 161276254 . A . PASS END=161276254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 161276255 . C . PASS END=161276255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 161276263 . G . PASS END=161276263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 161276496 . A . PASS END=161276505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,925:0,64,255:26,0 chr1 161276506 . A . PASS END=161276544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1155:0,80,255:40,0 chr1 161276545 . T . PASS END=161276545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1400:0,79,255:40,0 chr1 161276546 . C . PASS END=161276694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,1215:0,84,255:40,0 chr1 161276695 . T . PASS END=161276704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,67,255:26,0 chr1 161276705 . G . PASS END=161276705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:20,0 chr1 161276706 . G . PASS END=161276706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 161276707 . A . PASS END=161276711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,765:0,42,255:19,0 chr1 161276712 . C . PASS END=161276712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:17,0 chr1 161277048 . C . PASS END=161277059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:15:0,41,551:0,41,255:19,0 chr1 161277060 . T . PASS END=161277082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:24,0 chr1 161277083 . G . PASS END=161277083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 161277084 . C . PASS END=161277132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:24,0 chr1 161277133 . C . PASS END=161277140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 161277141 . G . PASS END=161277144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 161277145 . A . PASS END=161277145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 161277146 . C . PASS END=161277158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 161277159 . A . PASS END=161277187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 161277188 . C . PASS END=161277188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 161277189 . C . PASS END=161277197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 161277198 . C . PASS END=161277199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 161277200 . G . PASS END=161277215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:9:0,26,327:0,26,255:9,0 chr1 161277217 . G . PASS END=161277217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 161277219 . A . PASS END=161277219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 161279624 . C . PASS END=161279624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 161279628 . C . PASS END=161279635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:25,0 chr1 161279636 . A . PASS END=161279637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 161279638 . A . PASS END=161279639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,824:0,75,255:25,0 chr1 161279640 . A . PASS END=161279640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:24,0 chr1 161279641 . A . PASS END=161279641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 161279642 . G . PASS END=161279643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 161279644 . G . PASS END=161279644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 161279645 . C . PASS END=161279651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr1 161279652 . G . PASS END=161279652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 161279653 . C . PASS END=161279658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 161279659 . T . PASS END=161279674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,984:0,68,255:26,0 chr1 161279675 . T . PASS END=161279676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161279677 . A . PASS END=161279677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 161279678 . G . PASS END=161279685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 161279686 . C . PASS END=161279700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr1 161279701 . G . PASS END=161279701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:19,0 chr1 161279702 . G . PASS END=161279715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 161279716 . C . PASS END=161279718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161279719 . G . PASS END=161279719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr1 161279720 . G . PASS END=161279725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 161279744 . G . PASS END=161279744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 161284192 . C . PASS END=161284193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 161284196 . A . PASS END=161284198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,617:0,54,255:19,0 chr1 161284199 . G . PASS END=161284205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 161284206 . T . PASS END=161284215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 161284218 . G . PASS END=161284218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 161284220 . C . PASS END=161284220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 161284221 . T . PASS END=161284221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161293392 . C . PASS END=161293392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1396:0,101,255:38,0 chr1 161293400 . G . PASS END=161293402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1457:0,104,255:40,0 chr1 161293404 . A . PASS END=161293447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:40:0,87,1310:0,87,255:40,0 chr1 161293448 . T . PASS END=161293461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1305:0,99,255:32,0 chr1 161293463 . A . PASS END=161293463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 161293465 . G . PASS END=161293465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,92,255:28,0 chr1 161298185 . G . PASS END=161298190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 161298191 . T . PASS END=161298191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 161298192 . T . PASS END=161298214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:19,0 chr1 161298215 . A . PASS END=161298240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:23,0 chr1 161298241 . A . PASS END=161298256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,47,255:19,0 chr1 161298257 . G . PASS END=161298261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:17:0,36,540:0,51,255:12,0 chr1 161298262 . C . PASS END=161298264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 161298265 . T . PASS END=161298265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:13,0 chr1 161298266 . C . PASS END=161298266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 161298267 . T . PASS END=161298273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 161298274 . A . PASS END=161298274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:11,0 chr1 161298275 . T . PASS END=161298284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 161298285 . C . PASS END=161298288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 161298290 . A . PASS END=161298290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 161309352 . C . PASS END=161309376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,150,255:40,0 chr1 161310384 . T . PASS END=161310446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:49:0,117,1755:0,131,255:40,0 chr1 161310448 . A . PASS END=161310448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,111,1665:0,147,255:37,0 chr1 161310450 . G . PASS END=161310450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,111,1665:0,141,255:37,0 chr1 161326467 . G . PASS END=161326469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 161326470 . T . PASS END=161326480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 161326481 . G . PASS END=161326481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 161326482 . G . PASS END=161326484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 161326485 . T . PASS END=161326485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 161326486 . G . PASS END=161326497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,792:0,66,255:27,0 chr1 161326498 . A . PASS END=161326504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 161326505 . G . PASS END=161326505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:26,0 chr1 161326506 . G . PASS END=161326522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:30,0 chr1 161326523 . T . PASS END=161326523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:29,0 chr1 161326524 . T . PASS END=161326542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1156:0,83,255:30,0 chr1 161326543 . G . PASS END=161326543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 161326544 . T . PASS END=161326555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:36,0 chr1 161326556 . G . PASS END=161326556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:28,0 chr1 161326557 . C . PASS END=161326579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,92,255:31,0 chr1 161326580 . G . PASS END=161326595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 161326596 . T . PASS END=161326596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr1 161326597 . C . PASS END=161326608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:22,0 chr1 161326609 . C . PASS END=161326631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:18:0,40,643:0,40,255:19,0 chr1 161332105 . T . PASS END=161332105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161332113 . C . PASS END=161332114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:27,0 chr1 161332116 . C . PASS END=161332116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,942:0,60,255:27,0 chr1 161332118 . G . PASS END=161332118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 161332119 . A . PASS END=161332139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:95:37:0,95,1319:0,95,255:40,0 chr1 161332140 . C . PASS END=161332330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:40:0,85,1321:0,85,255:40,0 chr1 161332855 . A . PASS END=161332855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 161332930 . G . PASS END=161332930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,120,255:31,0 chr1 161332951 . C . PASS END=161332951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1473:0,114,255:38,0 chr1 161332996 . A . PASS END=161332996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1457:0,104,255:37,0 chr1 161333003 . G . PASS END=161333003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 161333078 . C . PASS END=161333078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,102,255:21,0 chr1 161333086 . G . PASS END=161333086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 161333093 . G . PASS END=161333093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 161333235 . G . PASS END=161333235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 161333275 . G . PASS END=161333275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 161333321 . T . PASS END=161333321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 161333382 . C . PASS END=161333382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,108,1620:0,135,255:36,0 chr1 161333404 . G . PASS END=161333404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1170:0,50,255:30,2 chr1 161333537 . C . PASS END=161333537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 161333555 . C . PASS END=161333555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 161333704 . G . PASS END=161333704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 161333757 . G . PASS END=161333757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 161333807 . C . PASS END=161333807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 161333873 . A . PASS END=161333873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1305:0,108,255:36,0 chr1 161333918 . G . PASS END=161333918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161333922 . A . PASS END=161333922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161334007 . G . PASS END=161334007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr1 161334066 . C . PASS END=161334066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 161334112 . T . PASS END=161334112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 161334121 . C . PASS END=161334121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 161334141 . G . PASS END=161334141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161334243 . A . PASS END=161334243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1285:0,111,255:37,0 chr1 161334364 . C . PASS END=161334364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 161334459 . C . PASS END=161334459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 161334463 . C . PASS END=161334463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:33,0 chr1 161334487 . G . PASS END=161334487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 161334497 . G . PASS END=161334497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 161334755 . T . PASS END=161334757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 161334758 . G . PASS END=161334758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 161334759 . G . PASS END=161334760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 161334761 . T . PASS END=161334761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 161334762 . T . PASS END=161334940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:31:0,90,1119:0,92,255:40,0 chr1 161335316 . C . PASS END=161335321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 161335322 . T . PASS END=161335325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 161335326 . A . PASS END=161335326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:24,0 chr1 161335327 . T . PASS END=161335338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 161335339 . G . PASS END=161335393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1158:0,83,255:35,0 chr1 161335394 . G . PASS END=161335395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1095:0,72,255:32,0 chr1 161335396 . C . PASS END=161335419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1195:0,86,255:33,0 chr1 161335420 . T . PASS END=161335432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:71:26:0,71,1069:0,71,255:26,0 chr1 161335433 . A . PASS END=161335444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr1 161335445 . C . PASS END=161335445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 161335446 . T . PASS END=161335450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 161335451 . A . PASS END=161335452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 161335453 . G . PASS END=161335469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:21,0 chr1 161335470 . A T, 49.90 PASS DP=21;MQ=249.31;MQRankSum=3.063;ReadPosRankSum=3.063;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:6,4,0:5,6,0:48:85,0,50,350,393,743:255,0,255:11,0:4.9897e+01,6.6269e-05,5.3000e+01,3.4956e+02,4.2828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,2,8:3,8,6,4 chr1 161335471 . T . PASS END=161335478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 161335479 . C . PASS END=161335492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 161335988 . C . PASS END=161336068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,120,1800:0,122,255:40,0 chr1 161336229 . C . PASS END=161336291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,187,255:40,0 chr1 161337632 . C . PASS END=161337658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,117,1755:0,119,255:40,0 chr1 161475258 . A . PASS END=161475342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:40:0,120,1535:0,120,255:40,0 chr1 161475777 . C . PASS END=161475797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,161,255:40,0 chr1 161476123 . G . PASS END=161476135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:26,0 chr1 161476136 . A . PASS END=161476142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 161476143 . G . PASS END=161476143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr1 161476144 . C . PASS END=161476147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161476148 . A . PASS END=161476148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 161476149 . A . PASS END=161476149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 161476150 . C . PASS END=161476167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1202:0,84,255:31,0 chr1 161476168 . A . PASS END=161476168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 161476169 . A . PASS END=161476173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 161476174 . C . PASS END=161476174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 161476175 . T . PASS END=161476393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1274:0,84,255:40,0 chr1 161476394 . A . PASS END=161476394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:31,0 chr1 161476395 . G . PASS END=161476417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,92,255:33,0 chr1 161476418 . G . PASS END=161476431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:64:27:0,64,915:0,64,255:26,0 chr1 161479610 . A . PASS END=161479618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:18,0 chr1 161479619 . T . PASS END=161479619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 161479620 . G . PASS END=161479620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:18,0 chr1 161479621 . C . PASS END=161479622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 161479623 . C . PASS END=161479630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:26,0 chr1 161479631 . C . PASS END=161479707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1047:0,84,255:40,0 chr1 161479708 . A . PASS END=161479744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,129,255:40,0 chr1 161479745 . A G, 218.90 PASS DP=58;MQ=112.36;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,33,0:0,25,0:172:257,175,0,2225,175,2225:255,175,0:0,0:2.1890e+02,1.7155e+02,0.0000e+00,4.5000e+02,2.0632e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,29:0,0,26,32 chr1 161479746 . T . PASS END=161479782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,157,255:40,0 chr1 161479783 . A . PASS END=161479861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:90:37:0,90,1350:0,111,255:40,0 chr1 161479862 . A . PASS END=161479864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:75:38:0,75,1125:0,81,255:26,0 chr1 161480624 . T . PASS END=161480628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 161480629 . A . PASS END=161480629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:35,0 chr1 161480630 . G . PASS END=161480746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,104,1435:0,104,255:40,0 chr1 161483685 . C . PASS END=161483722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:75:0,120,1800:0,201,255:40,0 chr1 161487765 . C . PASS END=161487804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,120,1800:0,135,255:40,0 chr1 161487805 . T . PASS END=161487805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:25:60:0,25,1978:0,25,255:40,0 chr1 161487806 . T . PASS END=161487938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:40:0,99,1485:0,116,255:40,0 chr1 161489379 . G . PASS END=161489389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,162,255:40,0 chr1 161489592 . C . PASS END=161489704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1045:0,83,255:39,0 chr1 161489705 . C . PASS END=161489709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 161489710 . A . PASS END=161489710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:23,0 chr1 161489711 . G . PASS END=161489721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:24,0 chr1 161489722 . T . PASS END=161489722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 161489723 . C . PASS END=161489726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 161489727 . G . PASS END=161489754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,644:0,54,255:19,0 chr1 161489755 . A . PASS END=161489758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 161493080 . C . PASS END=161493194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1215:0,90,255:40,0 chr1 161493195 . G . PASS END=161493198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:25,0 chr1 161494449 . A . PASS END=161494454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 161494455 . G . LowGQ END=161494455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:9,0 chr1 161494456 . C . PASS END=161494459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 161494460 . A . PASS END=161494464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 161494465 . A . PASS END=161494465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 161494466 . G . PASS END=161494491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 161494492 . C . PASS END=161494512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,233:0,18,233:6,0 chr1 161494513 . T . PASS END=161494525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 161494526 . C . PASS END=161494540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,219:6,0 chr1 161494541 . G . PASS END=161494550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 161494551 . C . PASS END=161494567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr1 161494568 . G . PASS END=161494577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 161494578 . G . PASS END=161494578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 161494579 . T . PASS END=161494603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:9,0 chr1 161494604 . G . PASS END=161494621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 161494622 . G . PASS END=161494624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr1 161494625 . C . PASS END=161494625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 161494626 . C . PASS END=161494630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 161494631 . G . PASS END=161494631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 161494632 . G . PASS END=161494632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161494633 . C . PASS END=161494633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 161494634 . C . PASS END=161494634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161494635 . C . PASS END=161494661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,568:0,45,255:18,0 chr1 161494662 . G . PASS END=161494663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 161494664 . C . PASS END=161494673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 161494674 . A . PASS END=161494674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 161494675 . T . PASS END=161494683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 161494684 . A . PASS END=161494684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 161494685 . G . PASS END=161494699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,584:0,51,255:19,0 chr1 161494700 . G . PASS END=161494700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 161494701 . G . PASS END=161494703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 161494704 . C . PASS END=161494704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:20,0 chr1 161494705 . A . PASS END=161494713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:24,0 chr1 161494714 . T . PASS END=161494714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 161494715 . G . PASS END=161494717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 161494718 . G . PASS END=161494718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:22,0 chr1 161494719 . C . PASS END=161494734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,880:0,75,255:25,0 chr1 161494735 . T . PASS END=161494736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 161494737 . G . PASS END=161494749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:21,0 chr1 161494750 . G . PASS END=161494752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 161494753 . A . PASS END=161494758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 161494759 . A . PASS END=161494759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 161494760 . G . PASS END=161494781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 161494782 . G . PASS END=161494784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161494785 . G . PASS END=161494809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,768:0,66,255:22,0 chr1 161494810 . T . PASS END=161494810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:20,0 chr1 161494811 . C . PASS END=161494832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,845:0,66,255:25,0 chr1 161494833 . A . PASS END=161494833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,782:0,20,255:23,0 chr1 161494834 . T . PASS END=161494869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,831:0,66,255:24,0 chr1 161494870 . T . PASS END=161494870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 161494871 . G . PASS END=161494880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:23,0 chr1 161494881 . G . PASS END=161494881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 161494882 . T . PASS END=161494882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 161494883 . G . PASS END=161494883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 161494884 . A . PASS END=161494889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 161494890 . G . PASS END=161494890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 161494891 . T . PASS END=161494892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 161494893 . C . PASS END=161494903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 161494904 . C . PASS END=161494905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161494906 . A . PASS END=161494906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 161494907 . T . PASS END=161494946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:22,0 chr1 161494947 . G . PASS END=161494958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 161494959 . G . PASS END=161494965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 161494966 . G . PASS END=161494979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,53,255:20,0 chr1 161494980 . C . PASS END=161494982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 161494983 . A . PASS END=161494996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,698:0,44,255:19,0 chr1 161494997 . C . PASS END=161494997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr1 161494998 . G . PASS END=161495010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:18,0 chr1 161495011 . A . PASS END=161495011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 161495012 . C . PASS END=161495019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 161495020 . G . PASS END=161495020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr1 161495021 . C . PASS END=161495029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,613:0,40,255:19,0 chr1 161495030 . G . PASS END=161495033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:21,0 chr1 161495034 . A . PASS END=161495034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:20,0 chr1 161495035 . A . PASS END=161495041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 161495042 . C . PASS END=161495042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 161495043 . A . PASS END=161495043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161495044 . T . PASS END=161495044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:19,0 chr1 161495045 . T . PASS END=161495046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161495047 . T . PASS END=161495050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 161495051 . C . PASS END=161495051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161495052 . C . PASS END=161495073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,720:0,47,255:18,0 chr1 161495074 . T . PASS END=161495074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,596:0,27,255:16,0 chr1 161495075 . G . PASS END=161495099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:17:0,43,607:0,43,255:18,0 chr1 161495100 . G . PASS END=161495100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 161495101 . T . PASS END=161495102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 161495103 . T . PASS END=161495103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:14,0 chr1 161495104 . T . PASS END=161495105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 161495106 . G . PASS END=161495106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:14,0 chr1 161495107 . A . PASS END=161495108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 161495109 . G . PASS END=161495109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 161495110 . T . PASS END=161495112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:15,0 chr1 161495113 . A . PASS END=161495113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr1 161495114 . A . PASS END=161495116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 161495117 . C . PASS END=161495117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 161495118 . A . PASS END=161495119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 161495120 . T . PASS END=161495120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:10,0 chr1 161495121 . G . PASS END=161495129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,34,255:13,0 chr1 161495130 . A . PASS END=161495137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 161495138 . G . PASS END=161495139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161495140 . G . PASS END=161495191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,599:0,41,255:19,0 chr1 161495192 . G . PASS END=161495195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 161495196 . A . PASS END=161495196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 161495197 . A . PASS END=161495197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 161495198 . G . PASS END=161495198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,659:0,8,255:19,0 chr1 161495199 . C . PASS END=161495199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 161495200 . A . PASS END=161495200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 161495201 . T . PASS END=161495203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:23,0 chr1 161495204 . G . PASS END=161495204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 161495205 . A . PASS END=161495210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 161495211 . C . PASS END=161495221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 161495222 . C . PASS END=161495222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 161495223 . A . PASS END=161495223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 161495224 . A . PASS END=161495225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 161495226 . C . PASS END=161495226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 161495227 . G . PASS END=161495229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161495230 . C . PASS END=161495231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161495232 . C . PASS END=161495232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 161495233 . T . PASS END=161495239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 161495240 . G . PASS END=161495240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 161495241 . C . PASS END=161495247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 161495248 . C . PASS END=161495248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 161495249 . A . PASS END=161495256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 161495257 . A . PASS END=161495257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 161495258 . G . PASS END=161495261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 161495262 . G . PASS END=161495265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 161495266 . A . PASS END=161495276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:22,0 chr1 161495277 . T . PASS END=161495277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 161495278 . C . PASS END=161495282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 161495283 . A . PASS END=161495290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,798:0,50,255:20,0 chr1 161495291 . G . PASS END=161495291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161495292 . G . PASS END=161495292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 161495293 . C . PASS END=161495293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161495294 . C . PASS END=161495295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 161495296 . C . PASS END=161495296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161495297 . C . PASS END=161495297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161495298 . C . PASS END=161495298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161495299 . T . PASS END=161495299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161495300 . G . PASS END=161495306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 161495307 . G . PASS END=161495307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 161495308 . A . PASS END=161495312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161495313 . C . PASS END=161495329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,692:0,57,255:19,0 chr1 161495330 . C . PASS END=161495330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161495331 . T . PASS END=161495340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,767:0,50,255:20,0 chr1 161495341 . C . PASS END=161495363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 161495364 . G . PASS END=161495384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 161495385 . C . PASS END=161495393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,495:0,32,255:13,0 chr1 161495394 . C . PASS END=161495394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 161495395 . T . PASS END=161495404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 161495405 . G . PASS END=161495408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161495409 . A . PASS END=161495409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr1 161495410 . A . PASS END=161495414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 161495415 . C . PASS END=161495415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 161495416 . T . PASS END=161495420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 161495421 . G . PASS END=161495421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 161495422 . A . PASS END=161495447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:18,0 chr1 161495448 . C . PASS END=161495448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 161495449 . A . PASS END=161495451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 161495452 . A . PASS END=161495452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 161495453 . C . PASS END=161495464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,676:0,54,255:19,0 chr1 161495465 . G . PASS END=161495466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 161495467 . G . PASS END=161495517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,651:0,48,255:19,0 chr1 161495518 . A . PASS END=161495518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr1 161495519 . C . PASS END=161495523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 161495524 . A . PASS END=161495524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 161495525 . G . PASS END=161495526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 161495527 . A . PASS END=161495527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 161495528 . G . PASS END=161495528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 161495529 . C . PASS END=161495529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 161495530 . T . PASS END=161495537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 161495538 . A . PASS END=161495538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 161495539 . G . PASS END=161495542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 161495543 . C . PASS END=161495566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,504:0,39,255:13,0 chr1 161495567 . T . PASS END=161495567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 161495568 . G . PASS END=161495586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 161495587 . C . PASS END=161495588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 161495589 . G . PASS END=161495589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 161495590 . T . PASS END=161495590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:9,0 chr1 161495591 . G . PASS END=161495593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 161495594 . G . PASS END=161495600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 161495601 . G . PASS END=161495602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 161495603 . C . PASS END=161495622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,288:0,27,255:9,0 chr1 161495623 . A . PASS END=161495623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 161495624 . T . PASS END=161495625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 161495626 . T . PASS END=161495626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 161495627 . C . PASS END=161495629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 161495630 . G . PASS END=161495630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 161495631 . C . PASS END=161495645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 161495646 . C . PASS END=161495657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,255:0,21,255:9,0 chr1 161495658 . G . PASS END=161495664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 161495665 . A . PASS END=161495667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 161495668 . C . PASS END=161495692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 161495693 . G . PASS END=161495693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:13,0 chr1 161495694 . A . PASS END=161495694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 161495695 . T . PASS END=161495714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,492:0,45,255:19,0 chr1 161495715 . C . PASS END=161495716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 161495717 . C . PASS END=161495718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161495719 . C . PASS END=161495739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr1 161495740 . C . PASS END=161495740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 161495741 . C . PASS END=161495744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 161495745 . T . PASS END=161495745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 161495746 . A . PASS END=161495747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 161495748 . T . PASS END=161495748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 161495749 . C . PASS END=161495769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,856:0,69,255:24,0 chr1 161495770 . T . PASS END=161495770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 161495771 . C . PASS END=161495779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,939:0,75,255:26,0 chr1 161495780 . G . PASS END=161495793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 161495794 . G . PASS END=161495794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 161495795 . G . PASS END=161495847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1141:0,80,255:35,0 chr1 161495848 . C . PASS END=161495884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1130:0,99,255:36,0 chr1 161495885 . T C, 152.23 PASS DP=36;MQ=101.56;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,15,0:0,21,0:104:190,107,0,1338,107,1338:255,111,0:0,0:1.5223e+02,1.0443e+02,0.0000e+00,4.5000e+02,1.3920e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,16:0,0,17,19 chr1 161495886 . T . PASS END=161495922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:36:0,80,1234:0,80,255:38,0 chr1 161495923 . C . PASS END=161496005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1375:0,84,255:40,0 chr1 161496006 . A . PASS END=161496006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:32,0 chr1 161496007 . T . PASS END=161496021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:34,0 chr1 161496022 . A . PASS END=161496025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 161496026 . G . PASS END=161496046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 161496047 . C . PASS END=161496067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 161496068 . C . PASS END=161496069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,882:0,42,255:25,1 chr1 161496070 . A . PASS END=161496070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 161496071 . A . PASS END=161496072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161496073 . A . PASS END=161496094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1022:0,68,255:26,0 chr1 161496095 . C . PASS END=161496095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161496096 . C . PASS END=161496112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1030:0,68,255:25,0 chr1 161496113 . G . PASS END=161496113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 161496114 . C . PASS END=161496134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 161496135 . A . PASS END=161496135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 161496136 . A . PASS END=161496148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,854:0,75,255:26,0 chr1 161496149 . G . PASS END=161496149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161496150 . G . PASS END=161496161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,797:0,64,255:26,0 chr1 161496162 . A . PASS END=161496163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 161496164 . G . PASS END=161496164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr1 161496165 . C . PASS END=161496165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 161496166 . A . PASS END=161496174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,77,255:26,0 chr1 161496175 . G . PASS END=161496181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 161496182 . A . PASS END=161496182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 161496183 . G . PASS END=161496183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161496184 . T . PASS END=161496218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,836:0,61,255:26,0 chr1 161496219 . A . PASS END=161496219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,878:0,50,255:24,0 chr1 161496220 . A . PASS END=161496232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,894:0,62,255:24,0 chr1 161496233 . G . PASS END=161496233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,837:0,26,255:21,0 chr1 161496234 . C . PASS END=161496241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:24,0 chr1 161496242 . G . PASS END=161496242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr1 161496243 . A . PASS END=161496254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,925:0,75,255:26,0 chr1 161496255 . C . PASS END=161496257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 161496258 . A . PASS END=161496258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 161496259 . T . PASS END=161496260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 161496261 . T . PASS END=161496290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,64,255:26,0 chr1 161496291 . G . PASS END=161496291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:23,0 chr1 161496292 . G . PASS END=161496292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 161496293 . G . PASS END=161496293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:23,0 chr1 161496294 . C . PASS END=161496296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:24,0 chr1 161496297 . G . PASS END=161496297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:25,0 chr1 161496298 . G . PASS END=161496342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,931:0,69,255:26,0 chr1 161496343 . A . PASS END=161496343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:20,0 chr1 161496344 . C . PASS END=161496350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 161496351 . A . PASS END=161496380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:19,0 chr1 161512802 . T . PASS END=161512989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,121,255:40,0 chr1 161514491 . C . PASS END=161514504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:36,0 chr1 161514505 . A . PASS END=161514541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:37:0,95,1362:0,95,255:40,0 chr1 161514542 . A C, 201.02 PASS DP=54;MQ=47.30;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,27,0:0,27,0:160:239,163,0,2086,163,2086:255,162,0:0,0:2.0102e+02,1.5952e+02,0.0000e+00,4.5000e+02,1.9429e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,19:0,0,32,22 chr1 161514543 . A . PASS END=161514579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,143,255:40,0 chr1 161514580 . G . PASS END=161514716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:37:0,84,1350:0,84,255:40,0 chr1 161514717 . C . PASS END=161514739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 161514740 . A . PASS END=161514740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 161514741 . C . PASS END=161514748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 161518211 . C . PASS END=161518211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 161518212 . G . PASS END=161518213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 161518214 . T . PASS END=161518214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 161518215 . A . PASS END=161518223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:25,0 chr1 161518224 . T . PASS END=161518224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:24,0 chr1 161518225 . A . PASS END=161518458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,1008:0,81,255:40,0 chr1 161518459 . G . PASS END=161518468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 161518801 . C . PASS END=161518821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:81:0,120,1800:0,230,255:40,0 chr1 161519487 . C . PASS END=161519499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1078:0,80,255:33,0 chr1 161519500 . A . PASS END=161519500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 161519501 . G . PASS END=161519651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1172:0,83,255:40,0 chr1 161519652 . T . PASS END=161519652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1376:0,71,255:38,0 chr1 161519653 . T . PASS END=161519665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1390:0,81,255:40,0 chr1 161519666 . A . PASS END=161519666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1404:0,76,255:35,0 chr1 161519667 . C . PASS END=161519672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:89:40:0,89,1429:0,89,255:37,0 chr1 161519673 . C . PASS END=161519673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:35,0 chr1 161519674 . T . PASS END=161519723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:33:0,80,1186:0,80,255:37,0 chr1 161519724 . C . PASS END=161519724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr1 161519725 . A . PASS END=161519725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161519726 . G . PASS END=161519726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 161519727 . G . PASS END=161519729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 161519730 . G . PASS END=161519731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 161519732 . A . PASS END=161519732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr1 161519733 . A . PASS END=161519736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 161519737 . G . PASS END=161519737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 161519738 . C . PASS END=161519781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:32:0,80,1141:0,80,255:35,0 chr1 161519782 . G . PASS END=161519782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1134:0,75,255:29,0 chr1 161519783 . G . PASS END=161519787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1263:0,89,255:32,0 chr1 161519788 . T . PASS END=161519788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1119:0,63,255:31,0 chr1 161519789 . G . PASS END=161519802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1210:0,96,255:32,0 chr1 161519803 . G . PASS END=161519803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 161519804 . G . PASS END=161519806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:32,0 chr1 161519807 . A . PASS END=161519807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 161519808 . C . PASS END=161519819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:30,0 chr1 161519820 . G . PASS END=161519820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:26,0 chr1 161519821 . C . PASS END=161519821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 161519822 . C . PASS END=161519827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 161519828 . G . PASS END=161519834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 161519835 . C . PASS END=161519835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,984:0,32,255:23,0 chr1 161519836 . A . PASS END=161519838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 161519839 . C . PASS END=161519839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:23,0 chr1 161519840 . A . PASS END=161519841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:23,0 chr1 161551228 . A . LowDepth;LowGQ END=161551339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 161558212 . C . LowDepth;LowGQ END=161558232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 161559352 . C . PASS END=161559609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:83:33:0,83,1194:0,83,255:40,0 chr1 161560934 . A . PASS END=161561008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1097:0,80,255:37,0 chr1 161561009 . A . PASS END=161561009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 161561010 . G . PASS END=161561011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 161561012 . A . PASS END=161561012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 161561013 . C . PASS END=161561018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 161561019 . T . PASS END=161561019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 161561020 . C . PASS END=161561022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 161561023 . G . PASS END=161561024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 161561025 . C . PASS END=161561028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 161561029 . G . PASS END=161561031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 161561032 . A . PASS END=161561033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:48:29:0,48,955:0,48,255:25,0 chr1 161561034 . A . PASS END=161561035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161561036 . T . PASS END=161561036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:24,0 chr1 161561037 . C . PASS END=161561039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 161561040 . C . PASS END=161561051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1186:0,84,255:33,0 chr1 161561052 . A . PASS END=161561052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1121:0,63,255:31,0 chr1 161561053 . T . PASS END=161561063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1142:0,85,255:33,0 chr1 161561064 . T . PASS END=161561064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1080:0,69,255:31,0 chr1 161561065 . T . PASS END=161561083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:34:0,86,1194:0,86,255:36,0 chr1 161561084 . T . PASS END=161561084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1164:0,78,255:31,0 chr1 161561085 . C . PASS END=161561156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1213:0,84,255:37,0 chr1 161561157 . C . PASS END=161561185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1148:0,83,255:34,0 chr1 161561186 . A . PASS END=161561188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:23,0 chr1 161561919 . C . PASS END=161561924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 161561925 . G . PASS END=161561941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,247:0,21,247:9,0 chr1 161561942 . A . PASS END=161561942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 161561943 . T . PASS END=161561944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,272:0,3,255:10,0 chr1 161561945 . A . PASS END=161561945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 161561946 . T . PASS END=161561946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:11,0 chr1 161561947 . T . PASS END=161561951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 161561952 . C . PASS END=161561952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 161561953 . T . PASS END=161561958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 161561959 . C . PASS END=161561959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 161561960 . A . PASS END=161561984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:12,0 chr1 161561985 . T . PASS END=161561985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 161561986 . T . PASS END=161561992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 161561993 . G . PASS END=161561993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 161561994 . T . PASS END=161562005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:12,0 chr1 161562006 . T . PASS END=161562006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr1 161562007 . C . PASS END=161562010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 161562011 . T . PASS END=161562011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 161562012 . G . PASS END=161562019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 161562020 . A . PASS END=161562020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 161562021 . A . PASS END=161562022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 161562023 . C . PASS END=161562023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 161562024 . G . PASS END=161562032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 161565343 . C . PASS END=161565380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:96:0,120,1800:0,255,255:40,0 chr1 161569420 . C . PASS END=161569420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 161569421 . C . PASS END=161569421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 161569422 . A . PASS END=161569422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 161569423 . C . PASS END=161569426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 161569427 . G . PASS END=161569429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1015:0,84,255:29,0 chr1 161569430 . G . PASS END=161569430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr1 161569431 . T . PASS END=161569431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 161569432 . C . PASS END=161569432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 161569433 . A . PASS END=161569433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 161569434 . A . PASS END=161569434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:29,0 chr1 161569435 . A . PASS END=161569456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1078:0,90,255:35,0 chr1 161569457 . A . PASS END=161569531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:35:0,81,1336:0,81,255:40,0 chr1 161569532 . A . PASS END=161569568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:38:0,92,1395:0,92,255:40,0 chr1 161569569 . C T, 145.69 PASS DP=38;MQ=25.52;FractionInformativeReads=0.974 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,17,0:0,20,0:108:183,111,0,1417,111,1417:255,114,0:0,0:1.4569e+02,1.0835e+02,0.0000e+00,4.5000e+02,1.4312e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,26:0,0,19,18 chr1 161569570 . G . PASS END=161569580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:32,0 chr1 161569581 . C . PASS END=161569593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:26,0 chr1 161594305 . T . PASS END=161594429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:42:0,96,1463:0,96,255:40,0 chr1 161595935 . C . PASS END=161596132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,1002:0,81,255:40,0 chr1 161596133 . T . PASS END=161596133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1340:0,67,255:33,0 chr1 161596134 . C . PASS END=161596160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:33:0,81,1194:0,83,255:35,0 chr1 161596161 . C . PASS END=161596161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 161596162 . A . PASS END=161596171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 161596172 . G . PASS END=161596175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 161596176 . C . PASS END=161596176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr1 161596177 . T . PASS END=161596192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 161599568 . C . PASS END=161599576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 161599577 . C . PASS END=161599579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 161599580 . C . PASS END=161599580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 161599581 . T . PASS END=161599608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 161599609 . A . PASS END=161599609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 161599610 . G . PASS END=161599620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:12,0 chr1 161599621 . C . PASS END=161599622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 161599623 . C . PASS END=161599623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 161599624 . C . PASS END=161599630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 161599631 . C . PASS END=161599635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 161599636 . C . PASS END=161599636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 161599637 . T . PASS END=161599637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 161599638 . G . PASS END=161599651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,629:0,41,255:18,0 chr1 161599652 . C . PASS END=161599652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 161599653 . A . PASS END=161599653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 161599654 . G . PASS END=161599654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,0 chr1 161599655 . C . PASS END=161599655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 161599656 . G . PASS END=161599657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 161599658 . C . PASS END=161599658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 161599659 . A . PASS END=161599659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:14,0 chr1 161599660 . A . PASS END=161599670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 161599671 . C . PASS END=161599671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 161599672 . G . PASS END=161599692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,681:0,41,255:19,0 chr1 161599693 . T C, 95.60 PASS DP=20;MQ=30.37;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,12,0:0,8,0:56:133,59,0,709,59,709:255,60,0:0,0:9.5603e+01,5.6270e+01,1.0354e-05,4.5000e+02,9.1040e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,10:0,0,8,12 chr1 161599694 . T . PASS END=161599696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 161599697 . C . PASS END=161599715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 161599716 . G . PASS END=161599716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 161599717 . G . PASS END=161599726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 161599727 . C . PASS END=161599727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 161599728 . A . PASS END=161599730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:24,0 chr1 161599731 . G . PASS END=161599732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 161599733 . A . PASS END=161599733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 161599734 . G . PASS END=161599740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 161599741 . C . PASS END=161599745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 161599746 . G . PASS END=161599747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 161599748 . A . PASS END=161599754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 161599755 . A . PASS END=161599755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:29,0 chr1 161599756 . G . PASS END=161599757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 161599758 . C . PASS END=161599759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 161599760 . C . PASS END=161599766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 161599767 . C . PASS END=161599767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 161599768 . T . PASS END=161599777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:30,0 chr1 161599778 . C . PASS END=161599788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 161599789 . T . PASS END=161599800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 161599801 . A . PASS END=161599816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 161599817 . G . PASS END=161599825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,691:0,49,255:18,0 chr1 161600158 . C . PASS END=161600178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,161,255:40,0 chr1 161600845 . C . PASS END=161600869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:35,0 chr1 161600870 . G . PASS END=161600918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1299:0,100,255:38,0 chr1 161600919 . A . PASS END=161600919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1078:0,69,255:29,0 chr1 161600920 . T . PASS END=161600922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 161600923 . G . PASS END=161600950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 161600951 . A . PASS END=161600951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 161600952 . C . PASS END=161600957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 161600958 . G . PASS END=161600958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 161600959 . G . PASS END=161600970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 161600971 . T . PASS END=161600992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 161632646 . G . LowDepth;LowGQ END=161632646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 161633032 . A . LowDepth;LowGQ END=161633143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 161640042 . C . LowDepth;LowGQ END=161640062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 161641182 . C . PASS END=161641439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:43:0,120,1800:0,129,255:40,0 chr1 161642765 . A . PASS END=161642765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 161642766 . G . PASS END=161642766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1092:0,63,255:27,0 chr1 161642767 . T . PASS END=161642767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 161642768 . G . PASS END=161642768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 161642769 . G . PASS END=161642770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:29,0 chr1 161642771 . T . PASS END=161642771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 161642772 . G . PASS END=161642781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:29,0 chr1 161642782 . A . PASS END=161642782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr1 161642783 . C . PASS END=161642784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 161642785 . C . PASS END=161642785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1062:0,54,255:28,0 chr1 161642786 . C . PASS END=161642792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 161642793 . G . PASS END=161642793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 161642794 . G . PASS END=161642794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 161642795 . A . PASS END=161642795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 161642796 . G . PASS END=161642796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 161642797 . T . PASS END=161642797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 161642798 . T . PASS END=161642800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 161642801 . A . PASS END=161642801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 161642802 . G . PASS END=161642802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161642803 . G . PASS END=161642805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:26,0 chr1 161642806 . G . PASS END=161642817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:31,0 chr1 161642818 . G . PASS END=161642818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:29,0 chr1 161642819 . T . PASS END=161642849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:35,0 chr1 161642850 . T . PASS END=161642850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr1 161642851 . C . PASS END=161642947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1141:0,82,255:36,0 chr1 161642948 . G . PASS END=161642970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 161642971 . A . PASS END=161643006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,607:0,48,255:18,0 chr1 161643007 . A . PASS END=161643007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 161643008 . T . PASS END=161643008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 161643009 . C . PASS END=161643011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:16,0 chr1 161643012 . T . PASS END=161643012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:14,0 chr1 161643013 . G . PASS END=161643013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 161643014 . T . PASS END=161643014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:16,0 chr1 161643015 . C . PASS END=161643015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 161643016 . C . PASS END=161643016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 161643017 . A . PASS END=161643018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 161643019 . G . PASS END=161643019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 161643254 . G . PASS END=161643276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,692:0,54,255:19,0 chr1 161643277 . A . PASS END=161643280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 161643281 . A . PASS END=161643281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161643282 . G . PASS END=161643303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:20,0 chr1 161643304 . G . PASS END=161643312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 161643750 . C . LowDepth;LowGQ END=161643851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr1 161643852 . A . LowDepth END=161643863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 161645047 . C . PASS END=161645053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,907:0,64,255:25,0 chr1 161645054 . A . PASS END=161645055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 161645056 . G . PASS END=161645056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:29,0 chr1 161645057 . A . PASS END=161645062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1148:0,90,255:31,0 chr1 161645063 . T . PASS END=161645063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 161645064 . G . PASS END=161645064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 161645065 . A . PASS END=161645065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 161645066 . G . PASS END=161645101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1178:0,86,255:35,0 chr1 161645102 . A . PASS END=161645102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:30,0 chr1 161645103 . G . PASS END=161645221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1349:0,95,255:40,0 chr1 161645222 . G . PASS END=161645246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:35,0 chr1 161645247 . T . PASS END=161645253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:29:0,76,1072:0,76,255:26,0 chr1 161645254 . G . PASS END=161645254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161645255 . C . PASS END=161645258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,984:0,68,255:26,0 chr1 161645259 . T G, 129.11 PASS DP=28;MQ=114.43;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,13,0:0,15,0:81:167,84,0,1062,84,1062:255,84,0:0,0:1.2911e+02,8.1263e+01,0.0000e+00,4.5000e+02,1.1603e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,18:0,0,19,9 chr1 161645260 . A . PASS END=161645261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 161647118 . C . PASS END=161647126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 161647127 . C . PASS END=161647127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161647128 . T . PASS END=161647128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr1 161647129 . A . PASS END=161647129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161647130 . A . PASS END=161647140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 161647141 . G . PASS END=161647141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 161647142 . C . PASS END=161647144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 161647145 . A . PASS END=161647146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 161647147 . A . PASS END=161647147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,877:0,32,255:26,0 chr1 161647148 . A . PASS END=161647155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 161647266 . G . PASS END=161647271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 161647272 . A . PASS END=161647272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:23,0 chr1 161647273 . A . PASS END=161647274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161647275 . A . PASS END=161647278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161647279 . T . PASS END=161647279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 161647280 . C . PASS END=161647283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 161647284 . T . PASS END=161647284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 161647285 . A . PASS END=161647290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 161647291 . T . PASS END=161647306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,955:0,67,255:26,0 chr1 161647307 . T . PASS END=161647310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:25:0,57,855:0,67,255:19,0 chr1 161647311 . C . PASS END=161647315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 161647316 . A . PASS END=161647316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 161647317 . G . PASS END=161647323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 161647324 . A . PASS END=161647343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 161677004 . A . PASS END=161677007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr1 161677008 . T . PASS END=161677133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:32:0,84,1310:0,84,255:40,0 chr1 161680265 . C . PASS END=161680282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,177,255:40,0 chr1 161680550 . C . PASS END=161680563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 161680564 . A . PASS END=161680564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 161680565 . C . PASS END=161680569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr1 161680570 . C . PASS END=161680702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1215:0,82,255:40,0 chr1 161680998 . A . PASS END=161681021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,643:0,40,255:19,0 chr1 161681022 . C . PASS END=161681029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 161681030 . G . PASS END=161681031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,591:0,43,255:19,0 chr1 161681032 . T . PASS END=161681032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 161681033 . T . PASS END=161681043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 161681044 . C . PASS END=161681047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr1 161681048 . C . PASS END=161681049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 161681050 . G . PASS END=161681054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161681055 . T . PASS END=161681068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,731:0,49,255:19,0 chr1 161681069 . T . PASS END=161681069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161681070 . G . PASS END=161681070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 161681071 . G . PASS END=161681073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161681074 . A . PASS END=161681081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,660:0,46,255:19,0 chr1 161681082 . C . PASS END=161681086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 161681087 . A . PASS END=161681087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161681088 . C . PASS END=161681092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 161681093 . G . PASS END=161681093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 161681094 . T . PASS END=161681103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,825:0,66,255:23,0 chr1 161681104 . C . PASS END=161681104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 161681105 . C . PASS END=161681112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr1 161681113 . C . PASS END=161681113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 161681114 . T . PASS END=161681157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,886:0,61,255:26,0 chr1 161681158 . C . PASS END=161681182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr1 161681183 . C . PASS END=161681183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 161681184 . A . PASS END=161681193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,651:0,41,255:18,0 chr1 161681194 . C . PASS END=161681194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:15,0 chr1 161681195 . A . PASS END=161681206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr1 161681207 . C . PASS END=161681207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:15,0 chr1 161681208 . A . PASS END=161681214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:16,0 chr1 161681215 . T . PASS END=161681217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 161681218 . T . PASS END=161681218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:12,0 chr1 161681219 . C . PASS END=161681221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 161681222 . G . PASS END=161681222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 161681223 . G . PASS END=161681227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 161681228 . C . PASS END=161681228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 161681229 . C . PASS END=161681231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 161681232 . A . PASS END=161681232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 161681233 . A . PASS END=161681236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 161681237 . G . PASS END=161681237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 161681238 . C . PASS END=161681245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 161681246 . G . PASS END=161681252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:13:0,27,405:0,39,255:9,0 chr1 161681253 . T . PASS END=161681255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 161681256 . C . PASS END=161681256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 161681257 . A . PASS END=161681264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 161681724 . A . PASS END=161681742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 161681743 . T . PASS END=161681771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,795:0,69,255:26,0 chr1 161681772 . A . PASS END=161681779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 161681780 . A G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=2.889;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,16,0:0.533,0.000:30:9,8,0:5,8,0:48:85,0,50,564,485,1049:255,0,255:12,0:5.0000e+01,6.6786e-05,5.2710e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,4,10,6:7,7,10,6 chr1 161681781 . G . PASS END=161681781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161681782 . C . PASS END=161681805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1086:0,90,255:30,0 chr1 161681806 . A . PASS END=161681807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1086:0,74,255:26,0 chr1 161681808 . A . PASS END=161681808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161681809 . G . PASS END=161681809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 161681810 . T . PASS END=161681817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1163:0,90,255:30,0 chr1 161681818 . G . PASS END=161681959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1149:0,80,255:37,0 chr1 161681960 . G . PASS END=161681982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 161681983 . C . PASS END=161681983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 161681984 . C . PASS END=161681994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 161681995 . G . PASS END=161682001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:18,0 chr1 161682002 . G . PASS END=161682002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:14,0 chr1 161682003 . T . PASS END=161682008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:15,0 chr1 161682875 . G . PASS END=161682886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 161682887 . C . PASS END=161682989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1042:0,82,255:37,0 chr1 161682990 . T . PASS END=161682990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:26,0 chr1 161682991 . T . PASS END=161682993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 161682994 . G . PASS END=161682994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 161682995 . A . PASS END=161683008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 161683009 . T . PASS END=161683009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 161683010 . C . PASS END=161683044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:32,0 chr1 161683045 . C . PASS END=161683046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:26,0 chr1 161683047 . C . PASS END=161683050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1260:0,86,255:28,0 chr1 161683051 . A . PASS END=161683051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 161683052 . T . PASS END=161683058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1125:0,80,255:28,0 chr1 161683059 . T . PASS END=161683066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:26,0 chr1 161683067 . A . PASS END=161683079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:30,0 chr1 161683080 . T . PASS END=161683080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:29,0 chr1 161683081 . G . PASS END=161683089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 161683090 . C . PASS END=161683090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 161683091 . T . PASS END=161683096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 161683097 . G . PASS END=161683098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161683099 . C . PASS END=161683110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 161683111 . G . PASS END=161683125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 161683126 . T . PASS END=161683126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 161683127 . C . PASS END=161683128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 161683129 . G . PASS END=161683135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 161683136 . G A, 49.36 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:9,7,0:6,5,0:48:84,0,50,421,508,929:255,0,255:14,0:4.9361e+01,7.1964e-05,5.3000e+01,4.2118e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,11,5,7:8,7,6,6 chr1 161683137 . G . PASS END=161683147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 161683148 . C . PASS END=161683148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:20,0 chr1 161683149 . C . PASS END=161683151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 161683152 . A . PASS END=161683167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:19:0,42,630:0,52,255:18,0 chr1 161683168 . T . PASS END=161683170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 161692463 . A . PASS END=161692492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1248:0,86,255:34,0 chr1 161692493 . G . PASS END=161692493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:32,0 chr1 161692779 . T . PASS END=161692799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,151,255:40,0 chr1 161693157 . C . PASS END=161693159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 161693160 . C . PASS END=161693160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:15,0 chr1 161693161 . T . PASS END=161693161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 161693162 . C . PASS END=161693167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 161693168 . A . PASS END=161693169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:16,0 chr1 161693170 . G . PASS END=161693170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 161693171 . C . PASS END=161693171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,552:0,15,255:17,0 chr1 161693172 . C . PASS END=161693182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr1 161693183 . C . PASS END=161693195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 161693196 . G . PASS END=161693196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 161693197 . G . PASS END=161693202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr1 161693203 . C . PASS END=161693203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 161693204 . A . PASS END=161693206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:25,0 chr1 161693207 . T . PASS END=161693207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 161693208 . T . PASS END=161693214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,873:0,62,255:26,0 chr1 161693215 . G . PASS END=161693216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 161693217 . A . PASS END=161693217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 161693218 . G . PASS END=161693218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 161693219 . C . PASS END=161693219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 161693220 . G . PASS END=161693221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 161693222 . G . PASS END=161693223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,976:0,65,255:26,0 chr1 161693224 . A . PASS END=161693232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,944:0,81,255:30,0 chr1 161693233 . G . PASS END=161693233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr1 161693234 . T . PASS END=161693243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1156:0,83,255:31,0 chr1 161693244 . A . PASS END=161693244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:31,0 chr1 161693245 . C . PASS END=161693279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1156:0,83,255:35,0 chr1 161693280 . C . PASS END=161693281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 161693282 . C . PASS END=161693294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:29,0 chr1 161693295 . G . PASS END=161693297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:25,0 chr1 161693298 . A . PASS END=161693301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 161693302 . A . PASS END=161693302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 161693303 . C . PASS END=161693312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 161693313 . C . PASS END=161693314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 161693315 . C . PASS END=161693317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161693318 . A . PASS END=161693322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1031:0,74,255:26,0 chr1 161693323 . G . PASS END=161693325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 161693326 . C . PASS END=161693327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 161693328 . T . PASS END=161693328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161693329 . T . PASS END=161693329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 161693330 . G . PASS END=161693332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161693333 . G . PASS END=161693333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 161693334 . T . PASS END=161693336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161693337 . A . PASS END=161693362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,970:0,67,255:26,0 chr1 161693363 . A . PASS END=161693383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:18:0,41,630:0,41,255:18,0 chr1 161693384 . G . PASS END=161693399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,34,255:13,0 chr1 161693400 . C . PASS END=161693411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:11:0,24,360:0,25,255:10,0 chr1 161695611 . A . PASS END=161695623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 161695624 . G . PASS END=161695630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:9,0 chr1 161695631 . C . PASS END=161695638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 161695639 . G T, 80.11 PASS DP=11;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,5,0:0,6,0:30:118,33,0,427,33,427:255,33,0:0,0:8.0111e+01,3.0111e+01,4.2365e-03,4.2350e+02,6.4881e+01,4.2649e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,3:0,0,6,5 chr1 161695640 . C . PASS END=161695658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 161695659 . C . PASS END=161695675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 161695676 . C . PASS END=161695676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 161695677 . G . PASS END=161695697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,629:0,45,255:17,0 chr1 161695698 . T . PASS END=161695698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 161695699 . C . PASS END=161695734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,684:0,54,255:19,0 chr1 161695735 . G . PASS END=161695755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 161695756 . C . PASS END=161695774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr1 161695775 . G . PASS END=161695775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 161695776 . C . PASS END=161695776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 161695777 . G . PASS END=161695777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 161695778 . C . PASS END=161695823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,676:0,54,255:19,0 chr1 161695824 . T . PASS END=161695873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 161695874 . C . PASS END=161695877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 161696493 . A . PASS END=161696493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 161696494 . G . PASS END=161696505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:11,0 chr1 161696506 . G . PASS END=161696506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 161696507 . C . PASS END=161696507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 161696508 . C . PASS END=161696508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 161696509 . G . PASS END=161696514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 161696515 . G . PASS END=161696515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 161696516 . A . PASS END=161696516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,286:0,3,255:10,0 chr1 161696517 . G . PASS END=161696519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr1 161696520 . T . PASS END=161696521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 161696522 . A . PASS END=161696555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 161696556 . G . PASS END=161696556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161696557 . T . PASS END=161696570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 161696571 . G . PASS END=161696572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 161696573 . T . PASS END=161696584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:13,0 chr1 161696585 . C . PASS END=161696590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 161696591 . C . PASS END=161696598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 161696599 . G . PASS END=161696599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 161696600 . C . PASS END=161696603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 161696604 . A . PASS END=161696606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 161696607 . C . PASS END=161696615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161696616 . A . PASS END=161696616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 161696617 . G . PASS END=161696644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 161696645 . G . PASS END=161696665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 161696666 . G . PASS END=161696670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 161696671 . G . PASS END=161696673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161696674 . C . PASS END=161696674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 161696675 . A . PASS END=161696675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161696676 . C . PASS END=161696677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 161696678 . G . PASS END=161696692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 161696693 . G . PASS END=161696703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 161696704 . C . PASS END=161696705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 161696706 . A . PASS END=161696729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 161696730 . C . LowGQ END=161696730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:9,0 chr1 161696731 . C . PASS END=161696744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 161696745 . T . PASS END=161696781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 161696782 . G C, 50.00 PASS DP=10;MQ=250.00;MQRankSum=2.166;ReadPosRankSum=0.895;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,7,0:0.700,0.000:10:3,5,0:0,2,0:47:85,0,46,250,107,358:255,0,83:3,0:5.0000e+01,9.2932e-05,4.9427e+01,2.5035e+02,1.4207e+02,3.6065e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,1,4,3:2,1,4,3 chr1 161696783 . G . PASS END=161696783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 161697037 . G . PASS END=161697037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 161697038 . T . PASS END=161697038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 161697039 . T . PASS END=161697047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 161697048 . G . PASS END=161697059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 161697060 . A . PASS END=161697060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 161697061 . C . PASS END=161697083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 161697084 . G . PASS END=161697084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 161697085 . C . PASS END=161697086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 161697087 . G . PASS END=161697098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:19,0 chr1 161697099 . G . PASS END=161697102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 161697103 . A . PASS END=161697114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161697115 . C . PASS END=161697122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 161697123 . A . PASS END=161697123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 161697124 . A . PASS END=161697139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 161697140 . A . PASS END=161697140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr1 161697141 . T . PASS END=161697186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,914:0,62,255:26,0 chr1 161697187 . T . PASS END=161697187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:20,0 chr1 161697188 . G . PASS END=161697225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:22,0 chr1 161697226 . C . PASS END=161697228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 161697229 . C . PASS END=161697234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 161697235 . C . PASS END=161697246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,50,255:19,0 chr1 161697247 . C . PASS END=161697296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,62,255:23,0 chr1 161697297 . C . PASS END=161697297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 161697298 . G . PASS END=161697300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 161697301 . A . PASS END=161697301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,726:0,44,255:21,0 chr1 161697302 . A . PASS END=161697313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,930:0,72,255:24,0 chr1 161697314 . C . PASS END=161697314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr1 161697315 . A . PASS END=161697315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 161697316 . A . PASS END=161697316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr1 161697317 . A . PASS END=161697356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,898:0,62,255:26,0 chr1 161697357 . C . PASS END=161697365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 161697366 . C . PASS END=161697370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 161697371 . G . PASS END=161697379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161697380 . A . PASS END=161697391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 161697392 . C . PASS END=161697392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:21,0 chr1 161697393 . C . PASS END=161697409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:23,0 chr1 161697410 . T . PASS END=161697410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 161697411 . G . PASS END=161697417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 161697418 . C . PASS END=161697418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:20,2 chr1 161697419 . G . PASS END=161697419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,783:0,3,255:20,2 chr1 161697420 . G . PASS END=161697420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 161697421 . G . PASS END=161697428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 161697429 . G . PASS END=161697437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 161697438 . C . PASS END=161697438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 161697439 . C . PASS END=161697444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 161697445 . A . PASS END=161697446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 161697447 . A . PASS END=161697447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:12,0 chr1 161697448 . G . PASS END=161697452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 161719592 . A . PASS END=161719593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 161719594 . G . PASS END=161719595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 161719596 . T . PASS END=161719596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 161719597 . G . PASS END=161719626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 161719627 . G . PASS END=161719629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 161719630 . C . PASS END=161719630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 161719631 . A . PASS END=161719631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 161719632 . G . PASS END=161719632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 161719633 . C . PASS END=161719634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 161719635 . A . PASS END=161719641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 161719642 . C . PASS END=161719648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 161719649 . A . PASS END=161719649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 161719650 . G . PASS END=161719692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 161719693 . G . PASS END=161719693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 161719694 . T . PASS END=161719718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr1 161719719 . C . PASS END=161719719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 161719720 . G . PASS END=161719743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 161719744 . G . PASS END=161719746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 161719747 . C . PASS END=161719755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 161719756 . C . PASS END=161719756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 161719757 . G . PASS END=161719793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,621:0,51,255:17,0 chr1 161719794 . C . PASS END=161719794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 161719795 . G . PASS END=161719797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 161719798 . G . PASS END=161719812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,725:0,60,255:23,0 chr1 161719813 . T . PASS END=161719813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 161719814 . C . PASS END=161719815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 161719816 . A . PASS END=161719816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 161719817 . T . PASS END=161719829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr1 161719830 . T . PASS END=161719830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 161719831 . G . PASS END=161719832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 161719833 . C . PASS END=161719833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 161719834 . A . PASS END=161719835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 161719836 . C . PASS END=161719837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,792:0,55,255:19,0 chr1 161719838 . C . PASS END=161719841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 161719842 . A . PASS END=161719843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 161719844 . A . PASS END=161719846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 161719847 . C . PASS END=161719847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 161719848 . C . PASS END=161719860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 161719861 . A . PASS END=161719862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 161719863 . T . PASS END=161719865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:21,0 chr1 161719866 . G . PASS END=161719868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 161719869 . A . PASS END=161719892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:22,0 chr1 161719893 . T . PASS END=161719897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 161719898 . C . PASS END=161719919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 161719920 . C . PASS END=161719935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 161720922 . G . PASS END=161720924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 161720925 . C . LowGQ END=161720925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 161720926 . T . PASS END=161720942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 161720943 . C . PASS END=161720947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 161720948 . G . PASS END=161720956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 161720957 . C . PASS END=161720961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 161721445 . G . PASS END=161721448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,871:0,78,255:26,0 chr1 161721449 . C . PASS END=161721449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 161721450 . T . PASS END=161721450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,834:0,53,255:27,0 chr1 161721451 . T . PASS END=161721457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 161721458 . T . PASS END=161721458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 161721459 . C . PASS END=161721571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:28:0,84,1047:0,84,255:40,0 chr1 161721656 . G . PASS END=161721669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,130,255:40,0 chr1 161721670 . T . PASS END=161721706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,167,255:40,0 chr1 161721707 . C T, 36.82 PASS DP=65;MQ=249.45;MQRankSum=5.749;ReadPosRankSum=2.978;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,20,0:0.308,0.000:65:25,11,0:20,9,0:37:72,0,50,715,1601,2317:255,0,255:40,0:3.6817e+01,9.2552e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,24,6,14:25,20,13,7 chr1 161721708 . G . PASS END=161721744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,164,255:40,0 chr1 161721745 . G . PASS END=161721774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,159,255:40,0 chr1 161722158 . A . PASS END=161722234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,150,255:40,0 chr1 161722235 . T . PASS END=161722254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:34:0,87,1305:0,102,255:40,0 chr1 161722865 . G . PASS END=161722875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:31,0 chr1 161722876 . T . PASS END=161722876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,996:0,79,255:30,0 chr1 161722877 . T . PASS END=161723030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1073:0,89,255:40,0 chr1 161723031 . T . PASS END=161723046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,77,255:26,0 chr1 161723047 . G . PASS END=161723050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 161723051 . G . PASS END=161723051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 161726576 . C . PASS END=161726594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,885:0,75,255:26,0 chr1 161726595 . G . PASS END=161726611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1055:0,84,255:33,0 chr1 161726612 . T . PASS END=161726612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr1 161726613 . T . PASS END=161726711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,1175:0,82,255:37,0 chr1 161726712 . T . PASS END=161726712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 161726713 . G . PASS END=161726725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 161726726 . G . PASS END=161726737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:26,0 chr1 161736151 . A . PASS END=161736156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 161736157 . G . PASS END=161736177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,837:0,66,255:24,0 chr1 161736178 . A . PASS END=161736186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:29,0 chr1 161736187 . T . PASS END=161736187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 161736188 . C . PASS END=161736232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1091:0,83,255:34,0 chr1 161736237 . G . PASS END=161736237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 161748034 . A . PASS END=161748110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:49:0,96,1440:0,140,255:40,0 chr1 161751700 . A . PASS END=161751700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 161751702 . G . PASS END=161751789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:61:0,120,1800:0,183,255:40,0 chr1 161753780 . T . PASS END=161753886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,99,1377:0,105,255:40,0 chr1 161761195 . C . PASS END=161761196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 161761198 . G . PASS END=161761308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:36:0,90,1350:0,92,255:40,0 chr1 161761309 . G . PASS END=161761309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:30,0 chr1 161761310 . G . PASS END=161761325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,89,255:34,0 chr1 161761326 . T . PASS END=161761328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:21,0 chr1 161761914 . A . PASS END=161761917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:31,0 chr1 161761918 . T . PASS END=161761919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:32:0,60,1066:0,60,255:32,0 chr1 161761920 . G . PASS END=161761921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:32,0 chr1 161761922 . C . PASS END=161761923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1068:0,61,255:32,0 chr1 161761924 . G . PASS END=161762105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,988:0,82,255:40,0 chr1 161762106 . C . PASS END=161762113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,74,255:26,0 chr1 161762114 . A . PASS END=161762114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,864:0,42,255:20,0 chr1 161762115 . A . PASS END=161762117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:20,0 chr1 161771842 . G . PASS END=161771849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 161771850 . G . PASS END=161771852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr1 161771853 . T . PASS END=161771857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161771858 . G . PASS END=161771879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:34,0 chr1 161771880 . C . PASS END=161771880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:30,0 chr1 161771881 . T . PASS END=161772025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:34:0,89,1294:0,89,255:40,0 chr1 161772026 . T . PASS END=161772026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:30,0 chr1 161772027 . G . PASS END=161772046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1158:0,83,255:33,0 chr1 161772047 . A . PASS END=161772047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:30,0 chr1 161772048 . A . PASS END=161772060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1141:0,82,255:31,0 chr1 161772061 . A . PASS END=161772062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 161789423 . A . PASS END=161789608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:30:0,81,1163:0,90,255:40,0 chr1 161790860 . A . PASS END=161790951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:45:0,105,1575:0,119,255:40,0 chr1 161790954 . A . PASS END=161790954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 161790956 . G . PASS END=161790956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr1 161816239 . C . PASS END=161816239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 161816240 . A . PASS END=161816370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,1174:0,83,255:40,0 chr1 161821455 . C . PASS END=161821625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:93:47:0,93,1395:0,108,255:40,0 chr1 161823014 . G . PASS END=161823048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,130,255:40,0 chr1 161823049 . A . PASS END=161823114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,177,255:40,0 chr1 161823118 . G . PASS END=161823118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 161829997 . G . PASS END=161830019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,114,1429:0,114,255:40,0 chr1 161830020 . T . PASS END=161830067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:43:0,93,1395:0,93,255:40,0 chr1 161832988 . C . PASS END=161833102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:36:0,102,1530:0,108,255:40,0 chr1 161836151 . T . PASS END=161836162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:79:0,120,1800:0,224,255:40,0 chr1 161882086 . G . PASS END=161882170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:72:0,120,1800:0,182,255:40,0 chr1 161928236 . A . PASS END=161928236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 161928237 . G . PASS END=161928256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:36,0 chr1 161928257 . A . PASS END=161928257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:34,0 chr1 161928258 . C . PASS END=161928260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1341:0,108,255:38,0 chr1 161928261 . C . PASS END=161928261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,0 chr1 161928262 . G . PASS END=161928289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,104,1283:0,104,255:40,0 chr1 161928290 . T . PASS END=161928326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,115,1529:0,115,255:40,0 chr1 161928327 . A G, 47.85 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=4.584;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:9,13,0:17,6,0:47:83,0,50,642,901,1544:255,0,255:25,0:4.7852e+01,9.2932e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,8,11:16,10,8,11 chr1 161928328 . G . PASS END=161928364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,107,1488:0,107,255:40,0 chr1 161928365 . C . PASS END=161928405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1305:0,95,255:40,0 chr1 161928406 . A . PASS END=161928406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:28,0 chr1 161928407 . C . PASS END=161928419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 161928420 . C . PASS END=161928431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr1 161928432 . G . PASS END=161928442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,50,255:19,0 chr1 161928443 . A . PASS END=161928443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:14,0 chr1 161928444 . G . PASS END=161928444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 161953465 . T . PASS END=161953878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:29:0,80,1068:0,80,255:40,0 chr1 161953879 . T . PASS END=161953879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:27,0 chr1 161953880 . C . PASS END=161953889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1194:0,83,255:30,0 chr1 161953890 . T . PASS END=161953891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 161953892 . G . PASS END=161953896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1172:0,93,255:31,0 chr1 161953897 . C . PASS END=161953897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 161953898 . T . PASS END=161953908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 161953909 . G . PASS END=161953910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 161953911 . C . PASS END=161953913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 161953914 . G . PASS END=161953916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,1064:0,76,255:26,0 chr1 161953917 . G . PASS END=161953936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:31,0 chr1 161953937 . T . PASS END=161953937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr1 161953938 . A . PASS END=161953945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 161953946 . T . PASS END=161953950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,73,255:26,0 chr1 161953951 . G . PASS END=161953973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,956:0,84,255:28,0 chr1 161953974 . T . PASS END=161953974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 161953975 . G . PASS END=161953983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161953984 . A . PASS END=161953986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 161953987 . G . PASS END=161953987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 161953988 . T . PASS END=161953991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:27,0 chr1 161953992 . A . PASS END=161953992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 161953993 . G . PASS END=161954001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,67,255:26,0 chr1 161954002 . A . PASS END=161954002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:26,0 chr1 161954003 . T . PASS END=161954004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 161954005 . G . PASS END=161954007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 161954008 . T . PASS END=161954029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:25:0,75,939:0,75,255:26,0 chr1 161954030 . C . PASS END=161954030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 161954031 . A . PASS END=161954048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 161954049 . A . PASS END=161954051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr1 161954052 . A . PASS END=161954055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 161954056 . G . PASS END=161954066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 161954594 . C . PASS END=161954594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 161954595 . T . PASS END=161954595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 161954596 . T . PASS END=161954627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1044:0,82,255:35,0 chr1 161954628 . C . PASS END=161954628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:33,0 chr1 161954629 . A . PASS END=161954725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,81,255:40,0 chr1 161954726 . G . PASS END=161954751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 161954752 . A . PASS END=161954752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:21,0 chr1 161954753 . G . PASS END=161954753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 161954754 . A . PASS END=161954754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 161954755 . G . PASS END=161954770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:22,0 chr1 161966172 . T . PASS END=161966284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,89,255:40,0 chr1 161967615 . C . PASS END=161967621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 161967622 . A . PASS END=161967622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 161967623 . T . PASS END=161967629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:23,0 chr1 161967630 . T . PASS END=161967630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 161967631 . G . PASS END=161967637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 161967638 . T . PASS END=161967638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 161967639 . C . PASS END=161967642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 161967643 . T . PASS END=161967643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 161967644 . T . PASS END=161967653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr1 161967654 . G . PASS END=161967658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr1 161967659 . G . PASS END=161967659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 161967660 . G . PASS END=161967669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:34,0 chr1 161967670 . G . PASS END=161967670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 161967671 . G . PASS END=161967680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1278:0,89,255:34,0 chr1 161967681 . A G, 151.88 PASS DP=35;MQ=249.83;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:102:190,105,0,1319,105,1319:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,12:0,0,15,20 chr1 161967682 . C . PASS END=161967718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1280:0,89,255:35,0 chr1 161967719 . A . PASS END=161967729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 161967730 . A . PASS END=161967731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:28:0,72,1080:0,74,255:26,0 chr1 161967732 . G . PASS END=161967746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:36,0 chr1 161967747 . G . PASS END=161967747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:27,0 chr1 161967748 . C . PASS END=161967758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 161967759 . T . PASS END=161967759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 161967760 . C . PASS END=161967761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 161967762 . A . PASS END=161967762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:28,0 chr1 161967763 . T . PASS END=161967776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 161967777 . A . PASS END=161967777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:30,0 chr1 161967778 . C . PASS END=161967788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:30,0 chr1 161967789 . G . PASS END=161967789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 161967790 . A . PASS END=161967798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 161967799 . T . PASS END=161967799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 161967800 . G . PASS END=161967807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 161967808 . C . PASS END=161967808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 161967809 . T . PASS END=161967933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1208:0,81,255:40,0 chr1 161967934 . G . PASS END=161967934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 161967935 . A . PASS END=161968013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1161:0,80,255:35,0 chr1 161968014 . C . PASS END=161968026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 161968027 . C . PASS END=161968027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 161968028 . T . PASS END=161968034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 161968035 . T . PASS END=161968035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 161968036 . G . PASS END=161968046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 161968047 . T . PASS END=161968050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:18,0 chr1 161968051 . G . PASS END=161968051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:16,0 chr1 161968052 . G . PASS END=161968058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr1 161968059 . T . PASS END=161968059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 161968060 . G . PASS END=161968079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 161968080 . T . PASS END=161968080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 161968081 . C . PASS END=161968087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 161968088 . T . PASS END=161968088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:17,0 chr1 161968089 . G . PASS END=161968110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 161968111 . T . PASS END=161968129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,35,255:13,0 chr1 161968130 . A . PASS END=161968139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 161969903 . G . PASS END=161969909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 161969910 . T . PASS END=161969910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 161969911 . T . PASS END=161969917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,764:0,66,255:22,0 chr1 161969918 . C . PASS END=161969918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 161969919 . A . PASS END=161969920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 161969921 . T . PASS END=161969921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr1 161969922 . C . PASS END=161969922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 161969923 . T . PASS END=161969923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 161969924 . C . PASS END=161969925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 161969926 . T . PASS END=161969926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 161969927 . C . PASS END=161969938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,776:0,66,255:23,0 chr1 161969939 . T . PASS END=161969939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 161969940 . G . PASS END=161969957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,803:0,61,255:25,0 chr1 161969958 . G . PASS END=161969958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:23,0 chr1 161969959 . C . PASS END=161969969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:26:0,67,939:0,67,255:25,0 chr1 161969970 . A . PASS END=161969970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,848:0,51,255:23,0 chr1 161969971 . G . PASS END=161969971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 161969972 . T . PASS END=161969972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,729:0,15,255:22,0 chr1 161969973 . G . PASS END=161969973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:26,0 chr1 161969974 . G . PASS END=161969974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161969975 . G . PASS END=161969975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 161969976 . C . PASS END=161969976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,735:0,4,255:23,0 chr1 161969977 . T . PASS END=161969977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,811:0,28,255:25,0 chr1 161969978 . G . PASS END=161969978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 161969979 . G . PASS END=161969980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161969981 . A . PASS END=161969981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:25,0 chr1 161969982 . G . PASS END=161969984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 161969985 . C . PASS END=161969985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161969986 . G . PASS END=161969986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,924:0,70,255:26,0 chr1 161969987 . G . PASS END=161969987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,859:0,24,255:24,0 chr1 161969988 . C . PASS END=161969988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:26,0 chr1 161969989 . C . PASS END=161969990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,859:0,70,255:27,0 chr1 161969991 . G . PASS END=161969991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:3:28:0,3,775:0,3,255:24,0 chr1 161969992 . C . PASS END=161969993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:29,0 chr1 161969994 . T . PASS END=161969995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,851:0,70,255:28,0 chr1 161969996 . T . PASS END=161969996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,972:0,51,255:28,0 chr1 161969997 . C . PASS END=161969999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,898:0,73,255:28,0 chr1 161970000 . G . PASS END=161970003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 161970004 . A . PASS END=161970004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 161970005 . C . PASS END=161970006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 161970007 . T . PASS END=161970007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 161970008 . G . PASS END=161970010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 161970011 . T . PASS END=161970011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:27,0 chr1 161970012 . C . PASS END=161970012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 161970013 . T . PASS END=161970019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,79,255:26,0 chr1 161970020 . G . PASS END=161970020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 161970021 . C . PASS END=161970021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr1 161970022 . C . PASS END=161970022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 161970023 . G . PASS END=161970023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:28,0 chr1 161970024 . C . PASS END=161970028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr1 161970029 . A . PASS END=161970029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 161970030 . C . PASS END=161970047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1249:0,86,255:33,0 chr1 161970048 . A . PASS END=161970048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr1 161970049 . G . PASS END=161970057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:32,0 chr1 161970058 . C . PASS END=161970058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:32,0 chr1 161970059 . G . PASS END=161970077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1178:0,83,255:32,0 chr1 161970078 . G . PASS END=161970087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:72:33:0,72,1080:0,82,255:26,0 chr1 161970088 . T . PASS END=161970088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:24,0 chr1 161970089 . G . PASS END=161970094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1062:0,74,255:26,0 chr1 161970095 . A . PASS END=161970097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161970098 . C . PASS END=161970098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 161970099 . G . PASS END=161970101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 161970102 . T . PASS END=161970103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 161970104 . C . PASS END=161970105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 161970106 . T . PASS END=161970115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1016:0,68,255:25,1 chr1 161970116 . A . PASS END=161970116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 161970117 . C . PASS END=161970123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,984:0,68,255:25,0 chr1 161970124 . T . PASS END=161970125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 161970126 . A . PASS END=161970134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr1 161973546 . C . PASS END=161973548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 161976087 . C . PASS END=161976095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,933:0,65,255:26,0 chr1 161976096 . G . PASS END=161976196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:33:0,99,1189:0,99,255:40,0 chr1 161976197 . C . PASS END=161976233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:38:0,81,1305:0,81,255:40,0 chr1 161976234 . A G, 47.16 PASS DP=39;MQ=250.00;MQRankSum=5.137;ReadPosRankSum=-0.239;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,15,0:0.395,0.000:38:12,5,0:11,10,0:45:82,0,47,182,182,182:255,0,255:16,0:4.7157e+01,1.2710e-04,5.0000e+01,1.8193e+02,2.1670e+02,1.8494e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,9,9,6:9,14,5,10 chr1 161976235 . T . PASS END=161976235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:29,0 chr1 161976236 . T . PASS END=161976247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:33:0,60,900:0,82,255:24,0 chr1 161976248 . G . PASS END=161976254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:42:32:0,42,630:0,96,255:19,0 chr1 161976255 . A . PASS END=161976257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:21:32:0,21,315:0,96,255:9,0 chr1 161976258 . C . LowGQ END=161976263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:29,0:29:0:28:0,0,0:0,56,255:2,0 chr1 161987190 . C . PASS END=161987297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:36:0,95,1349:0,95,255:40,0 chr1 161989709 . C . PASS END=161989743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:26,0 chr1 161989744 . G . PASS END=161989772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr1 161989773 . A . PASS END=161989774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 161989775 . G . PASS END=161989778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 161989779 . G . PASS END=161989779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr1 161989780 . A . PASS END=161989785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 161989786 . G . PASS END=161989802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1041:0,81,255:29,0 chr1 161989803 . T . PASS END=161989804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 161989805 . G . PASS END=161989888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1139:0,80,255:34,0 chr1 161989889 . C . PASS END=161989889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr1 161989890 . C . PASS END=161989900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 161989901 . T . PASS END=161989901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,951:0,76,255:29,0 chr1 161989902 . C . PASS END=161989905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 161989906 . C . PASS END=161989941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr1 161989942 . T . PASS END=161989961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:17,0 chr1 161989962 . T . PASS END=161989962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 161989963 . C . PASS END=161989965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 161989966 . C . PASS END=161989972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 161993047 . C . PASS END=161993052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 161993053 . T . PASS END=161993053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 161993054 . A . PASS END=161993058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 161993059 . G . PASS END=161993060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,463:0,25,255:13,0 chr1 161993061 . T . PASS END=161993062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 161993063 . T . PASS END=161993063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 161993064 . C . PASS END=161993067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 161993068 . G . PASS END=161993068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 161993069 . T . PASS END=161993069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 161993070 . T . PASS END=161993070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 161993071 . G . PASS END=161993071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:13,0 chr1 161993072 . T . PASS END=161993075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 161993076 . C . PASS END=161993076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 161993077 . C . PASS END=161993082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 161993083 . T . PASS END=161993084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 161993085 . G . PASS END=161993087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 161993088 . G . PASS END=161993088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 161993089 . A . PASS END=161993090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161993091 . T . PASS END=161993091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 161993092 . C . PASS END=161993093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161993094 . C . PASS END=161993095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 161993096 . T . PASS END=161993096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 161993097 . C . PASS END=161993105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 161993106 . G . PASS END=161993106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 161993107 . C . PASS END=161993111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 161993112 . C . PASS END=161993116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 161993117 . T . PASS END=161993117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 161993118 . G . PASS END=161993126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 161993127 . G . PASS END=161993127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 161993128 . G . PASS END=161993131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 161993132 . T . PASS END=161993160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,374:0,33,255:13,0 chr1 161993161 . C . PASS END=161993163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 161993164 . C . PASS END=161993187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 161993188 . G . PASS END=161993188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 161993189 . A . PASS END=161993212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 161993213 . T . PASS END=161993213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 161993214 . T . PASS END=161993220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 162030688 . C G, 41.71 PASS DP=55;MQ=249.98;MQRankSum=6.044;ReadPosRankSum=5.071;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,19,0:0.345,0.000:55:19,9,0:17,10,0:41:76,0,50,679,1285,1965:255,0,255:30,0:4.1711e+01,3.1453e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,21,10,9:18,18,12,7 chr1 162039968 . A . PASS END=162039982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,660:0,54,255:18,0 chr1 162039983 . A . PASS END=162040040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,831:0,62,255:26,0 chr1 162040041 . C . PASS END=162040041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 162040042 . C . PASS END=162040047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr1 162040048 . G . PASS END=162040048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 162040049 . C . PASS END=162040049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 162040050 . A . PASS END=162040050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 162040051 . C . PASS END=162040055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 162040056 . T . PASS END=162040057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 162040058 . T . PASS END=162040064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:23,0 chr1 162040065 . A . PASS END=162040065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 162040066 . G . PASS END=162040069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 162040070 . A . PASS END=162040070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr1 162040071 . A . PASS END=162040072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 162085685 . G T, 45.02 PASS DP=60;MQ=250.00;MQRankSum=6.462;ReadPosRankSum=4.865;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,23,0:0.383,0.000:60:21,10,0:16,13,0:44:80,0,50,704,1257,1962:255,0,255:37,0:4.5016e+01,1.5868e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,17,9,14:22,15,12,11 chr1 162124195 . T . PASS END=162124266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,154,255:40,0 chr1 162237090 . C T, 119.23 PASS DP=25;MQ=250.00;FractionInformativeReads=0.960 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,15,0:0,9,0:69:157,72,0,931,72,931:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,17:0,0,12,12 chr1 162244012 . C T, 146.32 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,15,0:0,18,0:96:184,99,0,1271,99,1271:255,99,0:0,0:1.4632e+02,9.6318e+01,0.0000e+00,4.5000e+02,1.3109e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,16:0,0,19,14 chr1 162257134 . T . PASS END=162257226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,165,255:40,0 chr1 162270423 . C . PASS END=162270496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,118,1800:0,118,255:40,0 chr1 162302807 . G . PASS END=162302915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:34:0,102,1242:0,102,255:40,0 chr1 162313625 . A . PASS END=162313629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:18,0 chr1 162313630 . A . PASS END=162313630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr1 162313631 . G . PASS END=162313634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 162313635 . T . PASS END=162313649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,676:0,43,255:19,0 chr1 162313650 . C . PASS END=162313658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:25,0 chr1 162313659 . A . PASS END=162313659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 162313660 . G . PASS END=162313663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,978:0,67,255:26,0 chr1 162313664 . T . PASS END=162313666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162313667 . G . PASS END=162313667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 162313668 . A . PASS END=162313669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162313670 . G . PASS END=162313678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 162313679 . A . PASS END=162313684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1111:0,87,255:30,0 chr1 162313685 . A . PASS END=162313685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 162313686 . G . PASS END=162313690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr1 162313691 . C . PASS END=162313691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 162313692 . A . PASS END=162313697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:32,0 chr1 162313698 . C . PASS END=162313712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1166:0,86,255:34,0 chr1 162313713 . A . PASS END=162313713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:30,0 chr1 162313714 . T . PASS END=162313718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 162313719 . A . PASS END=162313719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:30,0 chr1 162313720 . G . PASS END=162313725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1162:0,83,255:32,0 chr1 162313726 . T . PASS END=162313727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 162313728 . G . PASS END=162313733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 162313734 . G . PASS END=162313734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:32:0,72,1080:0,80,255:23,0 chr1 162313735 . C T, 143.30 PASS DP=32;MQ=249.14;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,21,0:0,11,0:93:181,96,0,281,281,281:255,96,0:0,0:1.4330e+02,9.3298e+01,0.0000e+00,2.7807e+02,3.1284e+02,2.8108e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,13:0,0,16,16 chr1 162313736 . G . PASS END=162313739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:30:0,63,1035:0,63,255:24,0 chr1 162313740 . G . PASS END=162313741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:32:27:0,32,865:0,32,255:21,0 chr1 162313742 . A . PASS END=162313745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 162313746 . G . PASS END=162313746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:20,0 chr1 162313747 . C . PASS END=162313749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 162313750 . C . PASS END=162313766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,635:0,40,255:19,0 chr1 162324977 . G . PASS END=162324991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:26,0 chr1 162324992 . G . PASS END=162325123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,994:0,81,255:40,0 chr1 162325124 . G . PASS END=162325124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1249:0,57,255:33,0 chr1 162325125 . C . PASS END=162325134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:36:0,90,1300:0,92,255:35,0 chr1 162325135 . G . PASS END=162325143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,89,255:26,0 chr1 162325151 . A . PASS END=162325151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:22,0 chr1 162326750 . G . PASS END=162326846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:38:0,81,1331:0,81,255:40,0 chr1 162326847 . T . PASS END=162326886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:40:0,96,1440:0,116,255:40,0 chr1 162326887 . C . LowGQ END=162326891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:0:39:0,0,1196:0,0,255:38,6 chr1 162326892 . A . PASS END=162326926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,101,255:38,0 chr1 162330602 . T . PASS END=162330604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 162330605 . G . PASS END=162330645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1011:0,80,255:32,0 chr1 162330646 . C . PASS END=162330646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 162330647 . A . PASS END=162330663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 162330664 . T . PASS END=162330664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr1 162330665 . A . PASS END=162330668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 162330669 . T . PASS END=162330669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 162330670 . C . PASS END=162330673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 162330674 . C . PASS END=162330675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 162330676 . G . PASS END=162330676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162330677 . G . PASS END=162330677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:25,0 chr1 162330678 . C . PASS END=162330681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162330682 . G . PASS END=162330682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:25,0 chr1 162330683 . C . PASS END=162330684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162330685 . C . PASS END=162330685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 162330686 . T . PASS END=162330686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:25,0 chr1 162330687 . C . PASS END=162330687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 162330688 . A . PASS END=162330688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:24,0 chr1 162330689 . C . PASS END=162330694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,886:0,64,255:25,0 chr1 162330695 . A . PASS END=162330695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:21,0 chr1 162330696 . T . PASS END=162330698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:23,0 chr1 162330699 . A . PASS END=162330699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr1 162330700 . G . PASS END=162330700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 162330701 . G . PASS END=162330701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 162330702 . A . PASS END=162330703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 162330704 . C . PASS END=162330704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:22,0 chr1 162330705 . T . PASS END=162330706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 162330707 . G . PASS END=162330709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 162330710 . T . PASS END=162330710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,731:0,39,255:21,0 chr1 162330711 . C . PASS END=162330713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 162330714 . G . PASS END=162330714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 162335140 . A . PASS END=162335140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 162335141 . T . PASS END=162335141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 162335142 . G . PASS END=162335146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 162335147 . T . PASS END=162335171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 162335172 . T . PASS END=162335172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 162335173 . G . PASS END=162335190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:12,0 chr1 162335191 . C . PASS END=162335191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 162335192 . A . PASS END=162335207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:12,0 chr1 162335208 . G . LowGQ END=162335208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 162335209 . G . PASS END=162335218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 162335219 . C . PASS END=162335245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr1 162335246 . C . LowGQ END=162335246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 162335247 . C . PASS END=162335249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 162335250 . G . PASS END=162335255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 162335256 . C T, 49.86 PASS DP=15;MQ=250.00;MQRankSum=3.183;ReadPosRankSum=1.794;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:4,4,0:4,3,0:48:85,0,50,250,277,527:226,0,255:7,0:4.9856e+01,6.6527e-05,5.3000e+01,2.5025e+02,3.1195e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,4,3:5,3,3,4 chr1 162335257 . G . PASS END=162335260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 162335261 . A . PASS END=162335263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 162335264 . A . PASS END=162335264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 162335265 . G . PASS END=162335271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 162335272 . C . PASS END=162335287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 162335288 . T . PASS END=162335293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 162335294 . A . PASS END=162335296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 162335297 . A . PASS END=162335299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 162335300 . T . PASS END=162335359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:16,0 chr1 162336842 . T . PASS END=162336846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 162336847 . T . PASS END=162336847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 162336848 . C . PASS END=162336849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 162336850 . C . PASS END=162336850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 162336851 . A . PASS END=162336858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 162336859 . T . PASS END=162336859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 162336860 . T . PASS END=162336870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,560:0,40,255:19,0 chr1 162336871 . A . PASS END=162336884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:24,0 chr1 162336885 . A . PASS END=162336885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 162336886 . G . PASS END=162336894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 162336895 . G . PASS END=162336895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,794:0,41,255:23,0 chr1 162336896 . T . PASS END=162336900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,874:0,72,255:24,0 chr1 162336901 . T . PASS END=162336901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:23,0 chr1 162336902 . G . PASS END=162336902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 162336903 . T . PASS END=162336903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:19,0 chr1 162336904 . G . PASS END=162336920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:23,0 chr1 162336921 . G . PASS END=162336921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 162336922 . C . PASS END=162336925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:23,0 chr1 162336926 . A . PASS END=162336926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 162336927 . G . PASS END=162336941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,868:0,69,255:24,0 chr1 162336942 . G . PASS END=162336942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 162336943 . C . PASS END=162336943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 162336944 . C . PASS END=162336944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 162336945 . G . PASS END=162336952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 162336953 . C . PASS END=162336953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 162336954 . G . PASS END=162336957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 162336958 . T . PASS END=162336958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 162336959 . T . PASS END=162336964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 162336965 . A . PASS END=162336966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 162336967 . T . PASS END=162336973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 162336974 . A . PASS END=162336975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 162336976 . C . PASS END=162336985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 162336986 . G . PASS END=162336987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 162336988 . C . PASS END=162337000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:21,0 chr1 162337001 . G . PASS END=162337001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 162337002 . C . PASS END=162337020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:22,0 chr1 162337021 . G . PASS END=162337021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 162337022 . A . PASS END=162337033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 162337034 . T . PASS END=162337057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,47,255:18,0 chr1 162337058 . C . PASS END=162337061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:20,0 chr1 162337062 . A . PASS END=162337062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 162337063 . G . PASS END=162337063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 162337064 . C . PASS END=162337109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,586:0,41,255:19,0 chr1 162337110 . A . PASS END=162337110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr1 162337111 . G . PASS END=162337120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,660:0,54,255:18,0 chr1 162337121 . T . PASS END=162337121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 162337122 . C . PASS END=162337131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 162337132 . T . PASS END=162337136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 162337137 . G . PASS END=162337140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 162337141 . A . PASS END=162337141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 162337142 . A . PASS END=162337143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 162337144 . A . PASS END=162337144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 162337145 . C . PASS END=162337150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 162337151 . A . PASS END=162337152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 162337153 . A . PASS END=162337165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 162337166 . A . PASS END=162337166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 162337167 . C . PASS END=162337167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 162337168 . T . PASS END=162337222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr1 162337223 . T . PASS END=162337223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:15,0 chr1 162337224 . G . PASS END=162337237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,584:0,51,255:17,0 chr1 162337238 . A . PASS END=162337249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr1 162337250 . C . PASS END=162337257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:8,0 chr1 162343838 . C . PASS END=162343839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 162343840 . A . PASS END=162343840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 162343841 . G . PASS END=162343842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 162343843 . G . PASS END=162343843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 162343844 . A . PASS END=162343844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 162343845 . C . PASS END=162343874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:15,0 chr1 162343875 . A . PASS END=162343883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 162343884 . G . PASS END=162343909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 162343910 . G . PASS END=162343972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,390:0,33,255:13,0 chr1 162343973 . G . PASS END=162343973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 162343974 . C . PASS END=162343991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 162343992 . C . PASS END=162344010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 162344011 . C . PASS END=162344020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 162344021 . G . PASS END=162344021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 162344022 . T . PASS END=162344031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 162344032 . G . PASS END=162344068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 162344069 . G A, 48.48 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=2.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,5,0:0.385,0.000:13:2,2,0:6,3,0:47:83,0,50,179,286,465:155,0,255:8,0:4.8483e+01,8.3354e-05,5.3000e+01,1.7880e+02,3.2090e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,1,4:3,5,4,1 chr1 162344070 . C . PASS END=162344073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr1 162344074 . T . PASS END=162344074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 162344075 . G . PASS END=162344088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 162344089 . G . PASS END=162344106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 162344107 . A . PASS END=162344194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,592:0,41,255:19,0 chr1 162344195 . G . PASS END=162344206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,795:0,63,255:23,0 chr1 162344207 . A . PASS END=162344207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:22,0 chr1 162344208 . C . PASS END=162344214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:26,0 chr1 162344215 . T . PASS END=162344222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 162344223 . A . PASS END=162344223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 162344224 . T . PASS END=162344248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 162344249 . C . PASS END=162344256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 162344257 . C . PASS END=162344258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 162344259 . T . PASS END=162344262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 162344263 . G . PASS END=162344268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 162344269 . C . PASS END=162344270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:32:0,44,1051:0,44,255:28,0 chr1 162344271 . T . PASS END=162344352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:33:0,86,1194:0,86,255:40,0 chr1 162344353 . T . PASS END=162344389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:36:0,80,1168:0,80,255:40,0 chr1 162344390 . A G, 167.38 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,19,0:0,21,0:117:205,120,0,1531,120,1531:255,120,0:0,0:1.6738e+02,1.1738e+02,0.0000e+00,4.5000e+02,1.5215e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,15:0,0,18,22 chr1 162344391 . T . PASS END=162344427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:37:0,87,1402:0,87,255:39,0 chr1 162344428 . C . PASS END=162344463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,113,1568:0,113,255:40,0 chr1 162344512 . C . PASS END=162344520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,144,255:40,0 chr1 162344521 . A . PASS END=162344557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,137,255:40,0 chr1 162344558 . G A, 48.75 PASS DP=57;MQ=250.00;MQRankSum=6.425;ReadPosRankSum=1.102;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,25,0:0.439,0.000:57:12,13,0:20,12,0:47:84,0,50,892,1097,1989:255,0,255:30,0:4.8755e+01,7.9471e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,16,12,13:16,16,12,13 chr1 162344559 . G . PASS END=162344595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,115,1545:0,115,255:40,0 chr1 162344596 . T . PASS END=162344704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:37:0,80,1350:0,80,255:40,0 chr1 162344705 . A . PASS END=162344705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:29,0 chr1 162344706 . C . PASS END=162344709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 162344710 . C . PASS END=162344714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1205:0,96,255:33,0 chr1 162345080 . C . PASS END=162345090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,104,1354:0,104,255:40,0 chr1 162345091 . G A, 182.44 PASS DP=45;MQ=249.43;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,20,0:0,25,0:132:220,135,0,1743,135,1743:255,135,0:0,0:1.8244e+02,1.3244e+02,0.0000e+00,4.5000e+02,1.6721e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,14:0,0,24,21 chr1 162345092 . C . PASS END=162345128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,104,1771:0,104,255:40,0 chr1 162345129 . G . PASS END=162345161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:55:0,120,1800:0,152,255:40,0 chr1 162345162 . T . PASS END=162345193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,111,1665:0,128,255:40,0 chr1 162346458 . C . PASS END=162346580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:42:0,110,1565:0,110,255:40,1 chr1 162348704 . A . PASS END=162348821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:43:0,95,1530:0,95,255:40,0 chr1 162351681 . T . PASS END=162351681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 162351682 . T . PASS END=162351682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:19,0 chr1 162351683 . G . PASS END=162351716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:24,0 chr1 162351717 . T . PASS END=162351717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 162351718 . C . PASS END=162351727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,953:0,75,255:26,0 chr1 162351728 . C . PASS END=162351734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 162351735 . C . PASS END=162351735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 162351736 . C . PASS END=162351742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 162351743 . T . PASS END=162351743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 162351744 . C . PASS END=162351746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 162351747 . T . PASS END=162351747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 162351748 . C . PASS END=162351765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 162351766 . C . PASS END=162351798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 162351799 . T . PASS END=162351810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 162351811 . G . PASS END=162351812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 162351813 . C . PASS END=162351817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr1 162351818 . C . PASS END=162351818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 162351819 . T . PASS END=162351821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 162351822 . G . PASS END=162351836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr1 162351837 . A . PASS END=162351837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 162351838 . G . PASS END=162351853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr1 162351854 . G . PASS END=162351856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162351857 . A . PASS END=162351871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1030:0,68,255:26,0 chr1 162351872 . A . PASS END=162351879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 162351880 . T . PASS END=162351880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 162351881 . G . PASS END=162351886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:30,0 chr1 162351887 . C . PASS END=162351887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 162351888 . T . PASS END=162351990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1157:0,82,255:37,0 chr1 162351991 . T . PASS END=162351991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 162351992 . T . PASS END=162351997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 162351998 . G . PASS END=162352001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 162352002 . A . PASS END=162352002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr1 162352003 . T . PASS END=162352005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 162352006 . A . PASS END=162352006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:24,0 chr1 162352007 . A . PASS END=162352008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:25,0 chr1 162352972 . G . PASS END=162352973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 162352974 . C . PASS END=162352986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 162352987 . A . PASS END=162352991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 162352992 . T . PASS END=162352992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 162352993 . T . PASS END=162353030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1119:0,87,255:35,0 chr1 162353031 . G . PASS END=162353031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 162353032 . A . PASS END=162353063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:31:0,84,1209:0,86,255:34,0 chr1 162353064 . T . PASS END=162353065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 162353066 . C . PASS END=162353076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,83,255:28,0 chr1 162353077 . A . PASS END=162353080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 162353081 . C . PASS END=162353085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:23,0 chr1 162353086 . C . PASS END=162353092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr1 162353093 . A . PASS END=162353095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 162353096 . C . PASS END=162353098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 162353099 . G . PASS END=162353113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr1 162353114 . C . PASS END=162353117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 162353118 . C . PASS END=162353118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 162353119 . A . PASS END=162353126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 162353127 . A . PASS END=162353135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,63,255:19,0 chr1 162353136 . A . PASS END=162353136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 162353137 . C . PASS END=162353160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 162353161 . C . PASS END=162353171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:21,0 chr1 162353172 . A . PASS END=162353174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 162353175 . C . PASS END=162353178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 162353179 . A . PASS END=162353198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,659:0,41,255:19,0 chr1 162353199 . A . PASS END=162353210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,717:0,60,255:22,0 chr1 162353211 . G . LowGQ END=162353211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,541:0,0,255:18,0 chr1 162353212 . A . PASS END=162353212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 162353213 . G . PASS END=162353213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,536:0,16,255:19,0 chr1 162353214 . G . PASS END=162353214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,599:0,35,255:21,0 chr1 162353215 . C . PASS END=162353227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,793:0,69,255:23,0 chr1 162353228 . A . PASS END=162353228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 162353229 . A . PASS END=162353354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,833:0,72,255:26,0 chr1 162353355 . T . PASS END=162353355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 162353356 . C . PASS END=162353381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:26,0 chr1 162353382 . A . PASS END=162353382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:25,0 chr1 162353383 . G . PASS END=162353384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162353385 . C . PASS END=162353386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 162353387 . T . PASS END=162353387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:25,0 chr1 162353388 . G . PASS END=162353389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 162353390 . G . PASS END=162353393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 162353394 . A . PASS END=162353394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 162353395 . T . PASS END=162353395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162353396 . G . PASS END=162353397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 162353398 . C . PASS END=162353399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162353400 . G . PASS END=162353400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 162353401 . C . PASS END=162353402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 162353403 . C . PASS END=162353405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr1 162353406 . C . PASS END=162353407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 162353408 . C . PASS END=162353421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,963:0,67,255:26,0 chr1 162353422 . C . PASS END=162353432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 162353433 . A . PASS END=162353459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,953:0,65,255:26,0 chr1 162353460 . T . PASS END=162353460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 162353461 . G . PASS END=162353461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 162353462 . T . PASS END=162353462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 162353463 . C . PASS END=162353464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 162353465 . T . PASS END=162353465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,65,255:19,0 chr1 162353466 . T . PASS END=162353466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:18,0 chr1 162353467 . T . PASS END=162353473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 162367070 . T . PASS END=162367070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 162367071 . C T, 212.06 PASS DP=55;MQ=249.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,26,0:0,29,0:162:250,165,0,350,350,350:255,165,0:0,0:2.1206e+02,1.6206e+02,0.0000e+00,3.4683e+02,3.8160e+02,3.4984e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,30,25:0,0,29,26 chr1 162367072 . A . PASS END=162367105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,118,1800:0,118,255:40,0 chr1 162368713 . C . PASS END=162368715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 162368716 . A . PASS END=162368716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 162368717 . A . PASS END=162368718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1021:0,96,255:32,0 chr1 162368719 . T . PASS END=162368719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 162368720 . G . PASS END=162368855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:32:0,93,1186:0,96,255:40,0 chr1 162368856 . G . PASS END=162368856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr1 162368857 . T . PASS END=162368865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:35,0 chr1 162368866 . A . PASS END=162368877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:26:0,60,900:0,78,255:25,0 chr1 162372529 . C . PASS END=162372592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,157,255:40,0 chr1 162381673 . G . PASS END=162381779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:29:0,80,1174:0,80,255:40,0 chr1 162381780 . A . PASS END=162381780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1016:0,43,255:24,0 chr1 162381781 . C . PASS END=162381787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:25,0 chr1 162381788 . G . PASS END=162381792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:27:0,49,810:0,49,255:19,0 chr1 162381793 . T . PASS END=162381797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:21,0 chr1 162381798 . C . PASS END=162381806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,765:0,50,255:18,0 chr1 162467041 . A . PASS END=162467086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,104,1242:0,104,255:40,0 chr1 162467791 . A . PASS END=162467860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:17,0 chr1 162467861 . A . PASS END=162467862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 162467863 . G . PASS END=162467868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 162467869 . A . PASS END=162467869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 162467870 . G . PASS END=162467872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 162467873 . G . PASS END=162467873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 162467874 . T . PASS END=162467910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,450:0,36,255:13,0 chr1 162467911 . C . PASS END=162467940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 162467941 . G . PASS END=162467941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 162467942 . G . PASS END=162467944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 162467945 . C . PASS END=162467945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr1 162467946 . C . PASS END=162467966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,382:0,36,255:13,0 chr1 162467967 . A . PASS END=162467980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 162467981 . C . PASS END=162467981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 162467982 . T . PASS END=162467992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 162467993 . C . PASS END=162468016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 162468017 . A . PASS END=162468017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 162468018 . G . PASS END=162468032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 162468033 . A . PASS END=162468033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 162468034 . C . PASS END=162468049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 162468050 . G . PASS END=162468058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 162469745 . T . PASS END=162469755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,707:0,60,255:26,0 chr1 162469756 . G . PASS END=162469759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,992:0,81,255:30,0 chr1 162469760 . T . PASS END=162469760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr1 162469761 . G . PASS END=162469976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:31:0,86,963:0,86,255:40,0 chr1 162469977 . T . PASS END=162469977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1215:0,75,255:29,0 chr1 162469978 . G . PASS END=162469991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:32,0 chr1 162469992 . T . PASS END=162469992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 162469993 . T . PASS END=162469998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 162469999 . C . PASS END=162470002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:26,0 chr1 162470003 . T . PASS END=162470018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr1 162470019 . C . PASS END=162470034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,939:0,67,255:26,0 chr1 162470035 . C . PASS END=162470035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 162470036 . A . PASS END=162470036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:19,0 chr1 162470037 . G . PASS END=162470037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 162470703 . G . PASS END=162470704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 162470705 . T . PASS END=162470705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 162470706 . G . PASS END=162470709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:26,0 chr1 162470710 . A . PASS END=162470710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,809:0,39,255:25,0 chr1 162470711 . G . PASS END=162470712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:26,0 chr1 162470713 . A . PASS END=162470722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 162470723 . A . PASS END=162470724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:67:28:0,67,954:0,67,255:29,0 chr1 162470725 . A . PASS END=162470726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 162470727 . G . PASS END=162470727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 162470728 . G . PASS END=162470728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 162470729 . G . PASS END=162470729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 162470730 . T . PASS END=162470743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1073:0,80,255:33,0 chr1 162470744 . A . PASS END=162470745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:60:33:0,60,1149:0,60,255:32,0 chr1 162470746 . C . PASS END=162470785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1089:0,82,255:33,0 chr1 162470786 . T . PASS END=162470786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:29,0 chr1 162470787 . G . PASS END=162470877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1350:0,84,255:40,0 chr1 162470878 . G . PASS END=162470878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:29,0 chr1 162470879 . A . PASS END=162470886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 162470887 . A . PASS END=162470887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 162470888 . A . PASS END=162470894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1154:0,93,255:31,0 chr1 162473544 . G . PASS END=162473638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,117,1800:0,117,255:40,0 chr1 162482290 . C . PASS END=162482366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:49:0,120,1800:0,147,255:40,0 chr1 162482515 . C . PASS END=162482613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,111,1665:0,114,255:40,0 chr1 162487892 . A . PASS END=162487980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,143,255:40,0 chr1 162492194 . G . PASS END=162492194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 162492195 . T . PASS END=162492195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 162492196 . C . PASS END=162492198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1135:0,85,255:35,0 chr1 162492199 . T . PASS END=162492199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:33,0 chr1 162492200 . G . PASS END=162492203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:36,0 chr1 162492204 . A . PASS END=162492204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr1 162492205 . G . PASS END=162492340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:36:0,93,1395:0,108,255:40,0 chr1 162535859 . A . PASS END=162535860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162535861 . G . PASS END=162535861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 162535862 . A . PASS END=162536112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:28:0,80,942:0,80,255:40,2 chr1 162536113 . T . PASS END=162536136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,61,255:26,0 chr1 162536137 . A . PASS END=162536138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:17,0 chr1 162546567 . G . PASS END=162546595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1091:0,83,255:37,0 chr1 162546596 . G . PASS END=162546596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1308:0,59,255:36,0 chr1 162546597 . C . PASS END=162546669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:38:0,98,1380:0,98,255:40,0 chr1 162546670 . T . PASS END=162546670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:53:51:0,53,1367:0,53,255:40,0 chr1 162546671 . T . PASS END=162546728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,111,1545:0,113,255:40,0 chr1 162546729 . A . PASS END=162546729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1404:0,46,255:35,0 chr1 162546730 . G . PASS END=162546771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,81,255:38,0 chr1 162549218 . G . PASS END=162549393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:91:43:0,91,1530:0,91,255:40,0 chr1 162551077 . A . PASS END=162551086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1380:0,98,255:40,0 chr1 162551087 . T . PASS END=162551087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:40,0 chr1 162551088 . G . PASS END=162551249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,99,1485:0,117,255:40,0 chr1 162557265 . G . PASS END=162557283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 162557284 . C . PASS END=162557443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1071:0,87,255:40,0 chr1 162557444 . G . PASS END=162557444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 162557445 . A . PASS END=162557448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 162557449 . A . PASS END=162557458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 162558483 . T . PASS END=162558485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 162558486 . T . PASS END=162558486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 162558487 . T . PASS END=162558623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:29:0,87,1111:0,87,255:40,0 chr1 162560113 . G . PASS END=162560278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,108,1304:0,112,255:40,0 chr1 162560279 . T . PASS END=162560279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1277:0,75,255:35,0 chr1 162560280 . C . PASS END=162560301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1355:0,95,255:37,0 chr1 162562522 . C . PASS END=162562572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:55:0,120,1800:0,136,255:40,0 chr1 162567582 . C . PASS END=162567648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:64:0,120,1800:0,153,255:40,0 chr1 162569061 . G . PASS END=162569153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:39:0,90,1395:0,90,255:40,1 chr1 162602295 . C . PASS END=162602295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 162602355 . G . PASS END=162602355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 162602366 . G . PASS END=162602366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 162602392 . C . PASS END=162602392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 162602394 . T . PASS END=162602394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 162625086 . G . PASS END=162625086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 162688854 . A . PASS END=162688935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,116,1800:0,116,255:40,0 chr1 162722885 . C . PASS END=162722987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:28:0,80,1041:0,80,255:40,0 chr1 162724414 . G . PASS END=162724418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr1 162724419 . A . PASS END=162724419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 162724420 . C . PASS END=162724420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 162724421 . T . PASS END=162724423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 162724424 . G . PASS END=162724424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 162724425 . A . PASS END=162724429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:30,0 chr1 162724430 . G . PASS END=162724430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 162724431 . G . PASS END=162724433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 162724434 . A . PASS END=162724434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 162724435 . T . PASS END=162724506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1097:0,88,255:34,0 chr1 162724507 . C . PASS END=162724507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1156:0,50,255:31,0 chr1 162724508 . C . PASS END=162724523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:33,0 chr1 162724524 . T . PASS END=162724524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:29,0 chr1 162724525 . G . PASS END=162724551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:32,0 chr1 162724552 . A . PASS END=162724552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr1 162724553 . G . PASS END=162724570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1149:0,82,255:31,0 chr1 162724571 . G . PASS END=162724585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,86,255:26,0 chr1 162724586 . A . PASS END=162724594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 162724595 . A . PASS END=162724595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 162724596 . G . PASS END=162724601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 162724602 . A . PASS END=162724626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,870:0,62,255:26,0 chr1 162724627 . G . PASS END=162724627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 162724628 . A . PASS END=162724642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:23,0 chr1 162724643 . C . PASS END=162724645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 162724934 . C . PASS END=162724934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 162724946 . G . PASS END=162725076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:39:0,87,1305:0,117,255:40,0 chr1 162725077 . C . PASS END=162725093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,77,255:25,0 chr1 162725454 . A . PASS END=162725544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:82:40:0,82,1395:0,82,255:40,0 chr1 162725545 . A . PASS END=162725545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:30,0 chr1 162725546 . G . PASS END=162725546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 162725547 . C . PASS END=162725548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:27,0 chr1 162725549 . G . PASS END=162725549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 162725550 . T . PASS END=162725554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:63:33:0,63,945:0,68,255:24,0 chr1 162725555 . T . PASS END=162725559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:45:28:0,45,855:0,45,255:22,0 chr1 162729577 . C . PASS END=162729577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 162729586 . C . PASS END=162729593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:24,0 chr1 162729594 . A . PASS END=162729594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 162729595 . A . PASS END=162729596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr1 162729597 . G . PASS END=162729607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,995:0,81,255:29,0 chr1 162729608 . T . PASS END=162729608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:28,0 chr1 162729609 . T . PASS END=162729616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr1 162729617 . G . PASS END=162729617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 162729618 . G . PASS END=162729618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 162729619 . T . PASS END=162729619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:26,0 chr1 162729620 . G . PASS END=162729624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1109:0,80,255:31,0 chr1 162729625 . T . PASS END=162729625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 162729626 . G . PASS END=162729628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 162729629 . C . PASS END=162729629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 162729630 . T . PASS END=162729722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1156:0,84,255:40,0 chr1 162729723 . A . PASS END=162729725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 162729726 . T . PASS END=162729726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 162729727 . C . PASS END=162729730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 162729731 . T . PASS END=162729731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,987:0,54,255:26,0 chr1 162729732 . T . PASS END=162729732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 162729733 . T . PASS END=162729733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1005:0,54,255:26,0 chr1 162729734 . G . PASS END=162729766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,876:0,61,255:26,0 chr1 162729767 . A . PASS END=162729769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 162731001 . G . PASS END=162731241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:31:0,80,1123:0,80,255:40,0 chr1 162731242 . C . PASS END=162731244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 162731256 . A . PASS END=162731256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 162735791 . A . PASS END=162735853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:53:0,120,1800:0,152,255:40,0 chr1 162737019 . A . PASS END=162737147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:82:31:0,82,1066:0,82,255:40,0 chr1 162737148 . A . PASS END=162737148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:31,0 chr1 162737149 . G . PASS END=162737149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 162740092 . G . PASS END=162740097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 162740098 . C . PASS END=162740100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 162740101 . A . PASS END=162740103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 162740104 . A . PASS END=162740146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,938:0,75,255:26,0 chr1 162740147 . A . PASS END=162740289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:31:0,90,1349:0,93,255:40,0 chr1 162740290 . G . PASS END=162740326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,127,255:40,0 chr1 162740327 . T C, 232.21 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,33,0:0,29,0:182:270,185,0,2292,185,2292:255,186,0:0,0:2.3221e+02,1.8221e+02,0.0000e+00,4.5000e+02,2.1698e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,43,19:0,0,34,28 chr1 162740328 . G . PASS END=162740356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,140,255:40,0 chr1 162740442 . A . PASS END=162740563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:87:42:0,87,1426:0,87,255:40,0 chr1 162741814 . G . PASS END=162741814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 162741815 . C . PASS END=162741860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:26,0 chr1 162741861 . G . PASS END=162741873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 162741874 . C . PASS END=162741874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 162741875 . A . PASS END=162741877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 162741878 . G . PASS END=162741878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 162741879 . G . PASS END=162741931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1101:0,82,255:33,0 chr1 162741932 . T . PASS END=162741932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 162741933 . G . PASS END=162741959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1194:0,83,255:31,0 chr1 162741960 . A . PASS END=162741960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 162741961 . A . PASS END=162741996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1194:0,90,255:31,0 chr1 162741997 . T . PASS END=162741999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 162742000 . C . PASS END=162742010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 162742011 . A . PASS END=162742012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:27,0 chr1 162742013 . G . PASS END=162742015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 162742016 . G . PASS END=162742037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr1 162742043 . T . PASS END=162742043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 162743259 . G . PASS END=162743300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1072:0,84,255:38,0 chr1 162743301 . A . PASS END=162743301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1288:0,62,255:37,0 chr1 162743302 . A . PASS END=162743373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:31:0,89,1149:0,89,255:40,0 chr1 162743374 . A . PASS END=162743375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr1 162743376 . A . PASS END=162743380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1097:0,93,255:31,0 chr1 162743381 . T . PASS END=162743385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 162743386 . G . PASS END=162743386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 162745442 . G . PASS END=162745633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:39:0,86,1366:0,86,255:40,0 chr1 162745926 . T . PASS END=162746161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:28:0,81,1215:0,84,255:40,0 chr1 162748370 . G . PASS END=162748519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:33:0,93,1190:0,99,255:40,0 chr1 162749855 . T . PASS END=162749855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,4:86:99:86:0,104,2946:0,104,255:40,5 chr1 162749902 . A . PASS END=162750036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,174,255:40,0 chr1 162750052 . G . PASS END=162750052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 162750078 . C . PASS END=162750078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 162750084 . A . PASS END=162750084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 162750113 . C . PASS END=162750113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 162750188 . C . PASS END=162750188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:30:31:0,30,450:0,77,255:10,0 chr1 162750206 . T . LowGQ END=162750206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:13,1:14:0:14:0,0,0:0,11,255:0,0 chr1 162750210 . CTT C, 75.05 PASS DP=12;MQ=243.83;FractionInformativeReads=0.833 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,10,0:1.000,0.000:10:0,6,0:0,4,0:25:87,28,0,187,187,187:255,0,39:0,12:7.5050e+01,2.5050e+01,1.3599e-02,2.0982e+02,2.1882e+02,2.1283e+02:0.00,9.00,12.01,34.77,43.77,37.78:0,0,4,6:0,0,6,4:162750208 chr1 162760591 . A . PASS END=162760595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1001:0,87,255:29,0 chr1 162760596 . A . PASS END=162760625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1119:0,87,255:31,0 chr1 162762449 . T . PASS END=162762454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:17,0 chr1 162762455 . T . PASS END=162762455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 162762456 . G . PASS END=162762473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,808:0,62,255:26,0 chr1 162762474 . C . PASS END=162762659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:28:0,81,1111:0,84,255:40,0 chr1 162762660 . T . PASS END=162762660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,7:56:52:56:0,52,1560:0,52,255:38,0 chr1 162762661 . C . PASS END=162762668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,121,255:40,0 chr1 162765411 . G . PASS END=162765415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1157:0,93,255:31,0 chr1 162765416 . T . PASS END=162765416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 162765417 . C . PASS END=162765437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1200:0,83,255:33,0 chr1 162765438 . C . PASS END=162765451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:33,0 chr1 162765452 . A . PASS END=162765453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 162766375 . G . PASS END=162766438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,2:105:99:64:0,120,1800:0,162,255:40,0 chr1 162766439 . A . PASS END=162766467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:82:0,120,1800:0,215,255:40,0 chr1 162767592 . A . PASS END=162767592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 162767593 . A . PASS END=162767593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 162767594 . A . PASS END=162767599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr1 162767600 . T . PASS END=162767601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 162767602 . C . PASS END=162767602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 162767603 . A . PASS END=162767603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 162767604 . T . PASS END=162767613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,987:0,81,255:38,0 chr1 162767614 . A . PASS END=162767614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr1 162767615 . C . PASS END=162767727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,114,1710:0,117,255:40,0 chr1 162769533 . A . PASS END=162769535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1319:0,95,255:36,0 chr1 162769536 . C . PASS END=162769536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1246:0,72,255:36,0 chr1 162769537 . G . PASS END=162769540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1371:0,95,255:37,0 chr1 162769541 . A . PASS END=162769541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1248:0,59,255:36,0 chr1 162769542 . C . PASS END=162769543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:38,0 chr1 162769544 . G . PASS END=162769727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:95:40:0,95,1421:0,95,255:40,0 chr1 162770003 . G . PASS END=162770083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:36:0,94,1303:0,94,255:40,0 chr1 162773221 . G . PASS END=162773222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 162773223 . T . PASS END=162773223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1031:0,41,255:30,0 chr1 162773224 . C . PASS END=162773325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:32:0,89,1174:0,89,255:40,0 chr1 162774057 . C . PASS END=162774060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1419:0,117,255:39,0 chr1 162774061 . G . PASS END=162774061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:38,0 chr1 162774062 . C . PASS END=162774094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1350:0,101,255:40,0 chr1 162774095 . T . PASS END=162774095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1260:0,70,255:28,0 chr1 162774096 . A . PASS END=162774110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 162774111 . C . PASS END=162774113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,987:0,73,255:26,0 chr1 162775184 . G . PASS END=162775229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1435:0,101,255:40,0 chr1 162775230 . A . PASS END=162775266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1198:0,83,255:40,0 chr1 162775267 . C T, 39.44 PASS DP=36;MQ=46.94;MQRankSum=0.578;ReadPosRankSum=3.850;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,15,0:0.417,0.000:36:12,6,0:9,9,0:39:74,0,43,537,722,1259:255,0,255:21,0:3.9442e+01,6.0293e-04,4.6001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,9,6:14,7,10,5 chr1 162775268 . A . PASS END=162775282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1343:0,105,255:36,0 chr1 162782088 . A . PASS END=162782107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:34:0,93,1395:0,97,255:40,0 chr1 162782108 . T . PASS END=162782144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,117,1766:0,117,255:40,1 chr1 162782145 . A G, 41.88 PASS DP=54;MQ=49.48;MQRankSum=-1.055;ReadPosRankSum=2.647;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,27,0:0.500,0.000:54:12,13,0:15,14,0:41:77,0,43,929,926,1854:255,0,255:26,0:4.1875e+01,3.8209e-04,4.6375e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,17,15,12:15,12,7,20 chr1 162782146 . A . PASS END=162782182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,110,1800:0,110,255:40,0 chr1 162782183 . G . PASS END=162782210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:34:0,90,1350:0,102,255:40,0 chr1 162822912 . C . PASS END=162822951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:70:0,120,1800:0,201,255:40,0 chr1 162824555 . T . PASS END=162825149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:85:34:0,85,1134:0,85,255:40,1 chr1 162825422 . C . PASS END=162825536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:42:0,99,1560:0,99,255:40,0 chr1 162825537 . T . PASS END=162825537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1435:0,79,255:35,0 chr1 162825538 . C . PASS END=162825548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1473:0,104,255:38,0 chr1 162829250 . C . PASS END=162829250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 162829251 . T . PASS END=162829252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 162829253 . G . PASS END=162829254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 162829255 . T . PASS END=162829255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 162829256 . G . PASS END=162829259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 162829260 . C . PASS END=162829260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 162829261 . C . PASS END=162829268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1086:0,90,255:30,0 chr1 162829269 . T . PASS END=162829269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 162829270 . T . PASS END=162829274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 162829275 . T . PASS END=162829275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 162829276 . T . PASS END=162829279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 162829280 . G . PASS END=162829280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 162829281 . C . PASS END=162829448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:32:0,96,1210:0,96,255:40,0 chr1 162830798 . C . PASS END=162830821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,238,255:40,0 chr1 163033691 . C . PASS END=163033691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 163038725 . A . PASS END=163038782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,120,1800:0,138,255:40,0 chr1 163039042 . G . PASS END=163039252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:32:0,84,1260:0,86,255:40,0 chr1 163039253 . G . PASS END=163039253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 163039254 . A . PASS END=163039270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 163039271 . T . PASS END=163039310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,806:0,62,255:26,0 chr1 163039311 . T . PASS END=163039311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 163039312 . T . PASS END=163039314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 163039315 . G . PASS END=163039318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:17,0 chr1 163039777 . T C, 45.74 PASS DP=57;MQ=250.00;MQRankSum=6.303;ReadPosRankSum=-0.352;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,22,0:0.386,0.000:57:14,12,0:21,10,0:45:81,0,50,787,1186,1973:255,0,255:33,0:4.5742e+01,1.3746e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,19,11,11:21,14,11,11 chr1 163040495 . G T, 173.41 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,27,0:0,15,0:123:211,126,0,1629,126,1629:255,126,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,22:0,0,23,19 chr1 163042185 . T . PASS END=163042289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,134,255:40,0 chr1 163042595 . A . PASS END=163042652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,107,1472:0,107,255:40,0 chr1 163042653 . G . PASS END=163042653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1700:0,78,255:40,0 chr1 163042654 . A . PASS END=163042656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,114,1721:0,114,255:40,0 chr1 163043246 . G . PASS END=163043389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:97:44:0,97,1645:0,97,255:40,0 chr1 163043390 . T . PASS END=163043390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:25:55:0,25,1214:0,25,255:40,0 chr1 163043391 . C . PASS END=163043412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:43:0,105,1575:0,112,255:40,0 chr1 163044111 . G . PASS END=163044350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,102,1800:0,102,255:40,0 chr1 163044409 . G . PASS END=163044420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:57:0,120,1800:0,139,255:40,0 chr1 163113260 . G T, 49.11 PASS DP=67;MQ=250.00;MQRankSum=6.992;ReadPosRankSum=3.575;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,30,0:0.448,0.000:67:19,12,0:18,18,0:48:84,0,50,1055,1278,2334:255,0,255:35,0:4.9115e+01,7.5070e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,17,15,15:18,19,19,11 chr1 163117132 . C . PASS END=163117138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 163117139 . A . PASS END=163117151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 163117152 . A . PASS END=163117152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 163117153 . A . PASS END=163117278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1125:0,86,255:40,0 chr1 163117279 . G . PASS END=163117287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 163117288 . A . PASS END=163117293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 163122328 . C . PASS END=163122333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1366:0,111,255:38,0 chr1 163122334 . A . PASS END=163122334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1265:0,75,255:37,0 chr1 163122335 . C . PASS END=163122479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:33:0,82,1305:0,82,255:40,0 chr1 163122480 . G . PASS END=163122480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 163122481 . G . PASS END=163122490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:30,0 chr1 163122491 . A . PASS END=163122492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 163122493 . A . PASS END=163122493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:30,0 chr1 163122494 . C . PASS END=163122501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1224:0,83,255:31,0 chr1 163122502 . T . PASS END=163122506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:31:0,75,1125:0,83,255:25,0 chr1 163131705 . A . PASS END=163131766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,111,1665:0,123,255:40,0 chr1 163138048 . T . PASS END=163138158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,120,1800:0,128,255:40,0 chr1 163142348 . C . PASS END=163142382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:105:0,120,1800:0,255,255:40,0 chr1 163172582 . C . PASS END=163172611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,155,255:40,0 chr1 163172612 . A . PASS END=163172625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,176,255:40,0 chr1 163187316 . A . PASS END=163187384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:69:0,120,1800:0,197,255:40,0 chr1 163295842 . A . PASS END=163295964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:43:0,93,1395:0,129,255:40,0 chr1 163297278 . C . PASS END=163297284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,233,255:40,0 chr1 163297285 . T . PASS END=163297321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:83:0,120,1800:0,233,255:40,0 chr1 163297322 . A C, 45.83 PASS DP=95;MQ=250.00;MQRankSum=8.185;ReadPosRankSum=6.117;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:58,37,0:0.389,0.000:95:32,19,0:26,18,0:45:81,0,50,1314,2037,3351:255,0,255:40,0:4.5831e+01,1.3513e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:36,22,20,17:30,28,16,21 chr1 163297323 . T . PASS END=163297352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:84:0,120,1800:0,239,255:40,0 chr1 163298018 . A . PASS END=163298094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:75:0,120,1800:0,225,255:40,0 chr1 163298636 . G . PASS END=163298697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:65:0,120,1800:0,183,255:40,0 chr1 163306541 . A . PASS END=163306638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,141,255:40,0 chr1 163307810 . A . PASS END=163307883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:59:0,120,1800:0,177,255:40,0 chr1 163309171 . T . PASS END=163309181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,167,255:40,0 chr1 163309182 . T . PASS END=163309218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,175,255:40,0 chr1 163309219 . A T, 49.37 PASS DP=83;MQ=250.00;MQRankSum=7.810;ReadPosRankSum=0.306;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,38,0:0.458,0.000:83:21,23,0:24,15,0:48:84,0,50,1285,1536,2821:255,0,255:40,0:4.9368e+01,7.1964e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,25,19,19:24,21,14,24 chr1 163309220 . A . PASS END=163309267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:68:0,120,1800:0,173,255:40,0 chr1 163310154 . A . PASS END=163310216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:102:0,120,1800:0,254,255:40,0 chr1 163313523 . A . PASS END=163313538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:71:0,120,1800:0,167,255:40,0 chr1 163313539 . C T, 49.19 PASS DP=75;MQ=250.00;MQRankSum=7.413;ReadPosRankSum=3.709;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,34,0:0.453,0.000:75:20,13,0:21,21,0:48:84,0,50,1150,1413,2564:255,0,255:40,0:4.9188e+01,7.4034e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,14,19,15:20,21,20,14 chr1 163313540 . G . PASS END=163313576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,209,255:40,0 chr1 163313577 . A . PASS END=163313652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:59:0,120,1800:0,160,255:40,0 chr1 163313653 . A . PASS END=163313660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,125,255:40,0 chr1 163315468 . C . PASS END=163315608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,117,1755:0,122,255:40,0 chr1 163317553 . A . PASS END=163317587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:35:0,90,1374:0,90,255:40,0 chr1 163317588 . G . PASS END=163317588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:58:60:0,58,1762:0,58,255:40,0 chr1 163317589 . T . PASS END=163317727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:81:50:0,81,1215:0,134,255:40,0 chr1 163317728 . A . PASS END=163317728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:78:44:0,78,1170:0,132,255:26,0 chr1 163318735 . G . PASS END=163318870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:46:0,120,1800:0,136,255:40,0 chr1 163325125 . G . PASS END=163325237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:89:44:0,89,1395:0,89,255:40,0 chr1 163325238 . G . PASS END=163325238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:28:42:0,28,1113:0,28,255:27,0 chr1 163325239 . A . PASS END=163325248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1225:0,86,255:33,0 chr1 163325249 . T . PASS END=163325249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:31,0 chr1 163325250 . G . PASS END=163325259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1117:0,82,255:33,0 chr1 164529060 . A . PASS END=164529070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 164529071 . G . PASS END=164529075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:16,0 chr1 164529076 . G . PASS END=164529076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 164529077 . G . PASS END=164529085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:19,0 chr1 164529086 . T . PASS END=164529088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 164529089 . C . PASS END=164529089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 164529090 . C . PASS END=164529090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 164529091 . A . PASS END=164529091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 164529092 . T . PASS END=164529095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 164529096 . G . PASS END=164529097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 164529098 . G . PASS END=164529124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:25,0 chr1 164529125 . G . PASS END=164529129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 164529130 . A . PASS END=164529130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 164529131 . G . PASS END=164529137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1108:0,87,255:32,0 chr1 164529138 . C . PASS END=164529138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 164529139 . A . PASS END=164529141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1113:0,96,255:33,0 chr1 164529142 . A . PASS END=164529142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:31,0 chr1 164529143 . T . PASS END=164529165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:33:0,85,1164:0,85,255:33,0 chr1 164529166 . A . PASS END=164529166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:30,0 chr1 164529167 . G . PASS END=164529171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1249:0,99,255:33,0 chr1 164529172 . G . PASS END=164529172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 164529173 . G . PASS END=164529204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1203:0,88,255:35,0 chr1 164529205 . A . PASS END=164529205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:33,0 chr1 164529206 . A . PASS END=164529219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1233:0,89,255:34,0 chr1 164529220 . C . PASS END=164529221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:70:36:0,70,1217:0,70,255:27,0 chr1 164529222 . G . PASS END=164529227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:29,0 chr1 164529228 . A . PASS END=164529228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:27,0 chr1 164529229 . G . PASS END=164529242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1150:0,85,255:30,0 chr1 164529243 . C . PASS END=164529244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 164529245 . G . PASS END=164529250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,88,255:30,0 chr1 164529383 . C . PASS END=164529404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:65:0,120,1800:0,191,255:40,0 chr1 164532475 . A . PASS END=164532548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:66:0,110,1800:0,110,255:40,0 chr1 164595166 . A . PASS END=164595174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:29,0 chr1 164595175 . A . PASS END=164595175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 164595176 . G . PASS END=164595290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:31:0,87,1141:0,93,255:40,0 chr1 164595291 . C . PASS END=164595296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 164595297 . C . PASS END=164595302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 164595303 . C . PASS END=164595310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:24,0 chr1 164595311 . T . PASS END=164595312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,798:0,51,255:21,0 chr1 164595313 . T . PASS END=164595320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,861:0,69,255:23,0 chr1 164595321 . G . PASS END=164595321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:22,0 chr1 164595322 . G . PASS END=164595322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 164595323 . A . PASS END=164595331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:23:0,42,630:0,53,255:17,0 chr1 164595332 . A . PASS END=164595333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr1 164761730 . G . PASS END=164761737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 164761738 . T . PASS END=164761738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 164761739 . A . PASS END=164761783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1136:0,80,255:35,0 chr1 164761784 . C . PASS END=164761812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,834:0,61,255:26,0 chr1 164761813 . C . PASS END=164761813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 164761814 . G . PASS END=164761837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 164761838 . G . PASS END=164761839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 164761840 . G . PASS END=164761879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 164761880 . G . PASS END=164761884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 164761885 . T . PASS END=164761888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 164761889 . G . PASS END=164761949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,44,255:19,0 chr1 164761950 . A . PASS END=164761963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:15:0,34,540:0,34,255:14,0 chr1 164761964 . A . PASS END=164761965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:11,0 chr1 164761966 . A . PASS END=164761975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 164768934 . A . PASS END=164768934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 164768936 . G . PASS END=164769126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1105:0,83,255:40,0 chr1 164776779 . G . PASS END=164776779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:30,0 chr1 164776780 . C . PASS END=164776914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:33:0,92,1187:0,92,255:40,0 chr1 164781226 . G . PASS END=164781372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:45:0,93,1395:0,135,255:40,0 chr1 164781373 . T . PASS END=164781386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:27:0,66,1027:0,66,255:26,0 chr1 164789309 . G . PASS END=164789406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:31:0,83,1141:0,83,255:40,0 chr1 164789407 . A . PASS END=164789421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:38:0,96,1440:0,114,255:38,0 chr1 164790774 . G . PASS END=164790863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:37:0,88,1350:0,88,255:40,0 chr1 164815821 . G . PASS END=164815827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 164815828 . G . PASS END=164815830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 164815831 . G . PASS END=164815832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,933:0,67,255:27,0 chr1 164815833 . T . PASS END=164815913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:29:0,86,1078:0,86,255:36,0 chr1 164818577 . C . PASS END=164818616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:35,0 chr1 164818617 . G . PASS END=164818617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr1 164818618 . A . PASS END=164818637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:33,0 chr1 164818638 . G . PASS END=164818639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:24,0 chr1 164853779 . G . PASS END=164853799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,206,255:40,0 chr1 165173117 . T . PASS END=165173133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:24,0 chr1 165173134 . A . PASS END=165173134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 165173135 . A . PASS END=165173144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 165173145 . G . PASS END=165173178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:36:0,89,1336:0,89,255:40,0 chr1 165173179 . A . PASS END=165173215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:37:0,98,1410:0,98,255:40,0 chr1 165173216 . A G, 157.42 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,22,0:0,15,0:107:195,110,0,295,295,295:255,111,0:0,0:1.5742e+02,1.0742e+02,0.0000e+00,2.9219e+02,3.2696e+02,2.9520e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,19:0,0,13,24 chr1 165173217 . T . PASS END=165173217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:33,0 chr1 165173218 . C . PASS END=165173253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,81,255:35,0 chr1 165173254 . G . PASS END=165173258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,83,255:28,0 chr1 165173259 . T . PASS END=165173277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,931:0,75,255:26,0 chr1 165175101 . C . PASS END=165175117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:18,0 chr1 165175118 . T . PASS END=165175118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 165175119 . C . PASS END=165175126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,668:0,43,255:19,0 chr1 165175127 . A . PASS END=165175127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 165175128 . T . PASS END=165175128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 165175129 . C . PASS END=165175143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:26,0 chr1 165175144 . A . PASS END=165175144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,846:0,39,255:25,0 chr1 165175145 . C . PASS END=165175148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 165175149 . G . PASS END=165175153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 165175154 . A . PASS END=165175154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 165175155 . A . PASS END=165175192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1070:0,80,255:33,0 chr1 165175193 . A . PASS END=165175193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 165175194 . G . PASS END=165175214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 165175215 . C . PASS END=165175218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 165175219 . G . PASS END=165175219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr1 165175220 . T . PASS END=165175253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,870:0,61,255:26,0 chr1 165175254 . C . PASS END=165175260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr1 165175261 . G . PASS END=165175261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:16,0 chr1 165175262 . T . PASS END=165175266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,609:0,46,255:16,0 chr1 165175267 . C . PASS END=165175267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 165175268 . T . PASS END=165175270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 165175271 . G . PASS END=165175271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 165176829 . T . PASS END=165176851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,191,255:40,0 chr1 165177300 . C . PASS END=165177330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:21:0,63,792:0,63,255:26,0 chr1 165177331 . T . PASS END=165177331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:24,3 chr1 165177332 . T . LowGQ END=165177335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:0:28:0,0,859:0,0,255:26,3 chr1 165177336 . G . PASS END=165177344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 165177345 . G . PASS END=165177345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 165177346 . C . PASS END=165177347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 165177348 . G . PASS END=165177369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,862:0,61,255:26,0 chr1 165179936 . C . PASS END=165180013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,119,1800:0,119,255:40,0 chr1 165182878 . C . PASS END=165182879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,864:0,65,255:26,0 chr1 165182880 . T . PASS END=165182905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,970:0,81,255:36,0 chr1 165182906 . A . PASS END=165182906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1144:0,77,255:35,0 chr1 165182907 . A . PASS END=165183038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,87,255:40,0 chr1 165183039 . C . PASS END=165183050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 165218645 . C . PASS END=165218649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:22,0 chr1 165218650 . T . PASS END=165218650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 165218651 . C . PASS END=165218675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:25,0 chr1 165218676 . G . PASS END=165218678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 165218679 . C T, 49.95 PASS DP=28;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=1.286;FractionInformativeReads=0.964;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,13,0:0.481,0.000:27:9,6,0:5,7,0:48:85,0,50,465,472,937:255,0,255:14,0:4.9952e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,3,10,3:10,4,9,4 chr1 165218680 . A . PASS END=165218716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1064:0,84,255:34,0 chr1 165218717 . G . PASS END=165218754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1164:0,83,255:35,0 chr1 165218755 . A . PASS END=165218791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,105,255:38,0 chr1 165218792 . G A, 48.98 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=1.350;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,17,0:0.447,0.000:38:8,10,0:13,7,0:48:84,0,50,579,751,1330:255,0,255:20,0:4.8985e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,8,9:13,8,9,8 chr1 165218793 . G . PASS END=165218829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,110,1201:0,110,255:40,0 chr1 165218830 . T . PASS END=165218848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,102,1620:0,102,255:40,0 chr1 165218849 . A . PASS END=165218849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:34,0 chr1 165218850 . G . PASS END=165218851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,108,1620:0,116,255:36,0 chr1 165218852 . A . PASS END=165218852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr1 165218853 . G . PASS END=165218871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1327:0,92,255:36,0 chr1 165218872 . A . PASS END=165218872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:29,0 chr1 165218873 . A . PASS END=165218877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,88,255:29,0 chr1 165232645 . C . PASS END=165232667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:90:0,120,1800:0,240,255:40,1 chr1 165322313 . T . PASS END=165322320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 165322321 . G . PASS END=165322325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 165322326 . A . PASS END=165322326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 165322327 . C . PASS END=165322475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:30:0,87,1305:0,90,255:40,0 chr1 165322476 . C . PASS END=165322479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:36:0,75,1125:0,97,255:26,0 chr1 165322480 . C . PASS END=165322485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:29,0 chr1 165322486 . G . PASS END=165322486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:27,0 chr1 165322487 . C . PASS END=165322499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 165324721 . C . PASS END=165324796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1286:0,89,255:40,0 chr1 165370500 . T . PASS END=165370506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:25,0 chr1 165370507 . A . PASS END=165370507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 165370508 . T . PASS END=165370508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 165370509 . C . PASS END=165370509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 165370510 . T . PASS END=165370515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,902:0,62,255:26,0 chr1 165370516 . G . PASS END=165370529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1003:0,81,255:31,0 chr1 165370530 . C . PASS END=165370530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 165370531 . T . PASS END=165370645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1111:0,80,255:40,0 chr1 165370646 . A . PASS END=165370646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:26,0 chr1 165370647 . C . PASS END=165370647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 165376049 . C . PASS END=165376080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:89:42:0,89,1543:0,89,255:40,0 chr1 165376081 . G . PASS END=165376154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,101,1364:0,101,255:40,0 chr1 165377464 . C . PASS END=165377514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,108,1673:0,108,255:40,0 chr1 165377515 . T . PASS END=165377551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:43:0,93,1395:0,96,255:40,0 chr1 165377552 . G A, 178.50 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,21,0:0,23,0:128:216,132,0,1631,132,1631:255,132,0:0,0:1.7850e+02,1.2850e+02,0.0000e+00,4.5000e+02,1.6327e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,38:0,0,23,21 chr1 165377553 . A . PASS END=165377555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,99,1485:0,111,255:34,0 chr1 165378795 . C . PASS END=165378807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:32:0,88,1166:0,88,255:36,0 chr1 165378808 . A . PASS END=165378808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr1 165378809 . G . PASS END=165378811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:36,0 chr1 165378812 . G . PASS END=165378813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:35,0 chr1 165378814 . C . PASS END=165378927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,123,255:40,0 chr1 165379939 . C . PASS END=165380068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1172:0,85,255:40,0 chr1 165380186 . C . PASS END=165380345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:88:39:0,88,1551:0,88,255:40,0 chr1 165380346 . G . PASS END=165380346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:33,0 chr1 165386278 . C . PASS END=165386278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:14:26:0,14,677:0,14,255:23,0 chr1 165386279 . T . PASS END=165386281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,884:0,61,255:27,0 chr1 165386282 . C . PASS END=165386282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,900:0,37,255:26,0 chr1 165386283 . C . PASS END=165386283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 165386284 . T . PASS END=165386293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,967:0,84,255:30,0 chr1 165386294 . C . PASS END=165386294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 165386295 . A . PASS END=165386354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1243:0,81,255:40,1 chr1 165386355 . A . PASS END=165386355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:37,0 chr1 165386356 . G . PASS END=165386425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1158:0,85,255:38,0 chr1 165386426 . G . PASS END=165386430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 165386431 . C . PASS END=165386441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:26:0,42,630:0,78,255:17,0 chr1 165386442 . A . PASS END=165386446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 165386447 . G . PASS END=165386447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 165386448 . T . PASS END=165386457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr1 165389107 . C . PASS END=165389128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:33:0,89,1249:0,89,255:40,0 chr1 165389129 . G A, 172.48 PASS DP=42;MQ=249.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,19,0:0,23,0:122:210,125,0,1554,125,1554:255,129,0:0,0:1.7248e+02,1.2248e+02,0.0000e+00,4.5000e+02,1.5725e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,17:0,0,22,20 chr1 165389130 . G . PASS END=165389166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,106,1737:0,106,255:40,0 chr1 165389167 . A . PASS END=165389242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:33:0,81,1215:0,92,255:40,0 chr1 165389243 . C . PASS END=165389251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,83,255:26,0 chr1 165397956 . C . PASS END=165397960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 165397961 . A . PASS END=165397961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 165397962 . G . PASS END=165397978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:9,0 chr1 165397979 . A . PASS END=165397997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 165397998 . T . PASS END=165397998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 165397999 . G . PASS END=165398012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 165398013 . G . PASS END=165398013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 165398014 . G . PASS END=165398016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 165398017 . G . PASS END=165398023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 165398024 . T . PASS END=165398039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 165398040 . T . PASS END=165398041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 165398042 . G . PASS END=165398077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 165398078 . C . PASS END=165398085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 165398086 . A . PASS END=165398086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 165398087 . G . PASS END=165398089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 165398090 . T . PASS END=165398114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 165398115 . T C, 44.88 PASS DP=11;MQ=250.00;MQRankSum=2.262;ReadPosRankSum=2.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,3,0:0.273,0.000:11:4,3,0:4,0,0:44:80,0,50,107,286,393:83,0,255:8,0:4.4880e+01,1.6283e-04,5.3000e+01,1.0728e+02,3.2085e+02,3.9637e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,1,2:5,3,1,2 chr1 165398116 . G . PASS END=165398148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,1 chr1 165398149 . G . PASS END=165398149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 165398150 . T . PASS END=165398152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 165398153 . A . PASS END=165398163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 165398164 . G . PASS END=165398164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 165398165 . A . PASS END=165398166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 165398167 . G . PASS END=165398188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 165398189 . T . PASS END=165398195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 165398196 . A . PASS END=165398196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 165398197 . G . PASS END=165398202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 165398203 . C . PASS END=165398203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 165414082 . C . PASS END=165414130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,128,255:40,0 chr1 165513534 . A . PASS END=165513537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 165513538 . C . PASS END=165513538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 165513539 . C . PASS END=165513539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 165513540 . C . PASS END=165513540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 165513541 . T . PASS END=165514143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:80:29:0,80,1094:0,80,255:40,0 chr1 165514144 . T . PASS END=165514149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 165514150 . C . PASS END=165514155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:30,0 chr1 165532742 . A . PASS END=165532759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 165532760 . G . PASS END=165532768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr1 165532769 . C . PASS END=165532800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,729:0,60,255:25,0 chr1 165532801 . G . PASS END=165532801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 165532802 . T . PASS END=165532802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 165532803 . G . PASS END=165532812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,946:0,78,255:26,0 chr1 165532813 . C . PASS END=165532838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1119:0,90,255:30,0 chr1 165532839 . G . PASS END=165532839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 165532840 . G . PASS END=165532904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1047:0,82,255:36,0 chr1 165532905 . T . PASS END=165532905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:33,0 chr1 165532906 . G . PASS END=165532946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:34,0 chr1 165532947 . C . PASS END=165532947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 165532948 . C . PASS END=165532948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 165532949 . G . PASS END=165532949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 165532950 . C . PASS END=165532952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 165532953 . C . PASS END=165532963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 165532964 . A . PASS END=165532964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 165532965 . A . PASS END=165532965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 165532966 . G . PASS END=165532967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 165532968 . A . PASS END=165532973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1147:0,90,255:30,0 chr1 165532974 . G . PASS END=165532975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 165532976 . A . PASS END=165532979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1164:0,93,255:31,0 chr1 165532980 . G . PASS END=165532981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1016:0,60,255:28,0 chr1 165532982 . C . PASS END=165532983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 165532984 . G . PASS END=165532984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:26,0 chr1 165532985 . G . PASS END=165532988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 165532989 . T . PASS END=165533004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,962:0,74,255:26,0 chr1 165533005 . C A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=3.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,15,0:0.577,0.000:26:4,4,0:7,11,0:48:85,0,49,536,394,930:255,0,255:11,0:5.0000e+01,7.2999e-05,5.1659e+01,4.5000e+02,4.2828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,8,8,7:6,5,5,10 chr1 165533006 . G . PASS END=165533035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 165533036 . T . PASS END=165533042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr1 165533043 . G . PASS END=165533058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 165533059 . T . PASS END=165533061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 165601477 . A . PASS END=165601493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1218:0,96,255:33,0 chr1 165601494 . G . PASS END=165601494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 165601495 . C . PASS END=165601503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 165601504 . C . PASS END=165601505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 165601506 . C . PASS END=165601508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 165601509 . C . PASS END=165601511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 165619078 . A . PASS END=165619078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr1 165619079 . C T, 49.41 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=4.873;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,22,0:0.458,0.000:48:8,16,0:18,6,0:48:84,0,50,758,893,1651:255,0,255:26,0:4.9405e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,14,16,6:14,12,12,10 chr1 165619080 . G . PASS END=165619116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:48:0,120,1800:0,136,255:40,0 chr1 165619117 . G . PASS END=165619201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,105,1575:0,120,255:40,0 chr1 165620251 . T . PASS END=165620251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr1 165620252 . A . PASS END=165620253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 165620254 . C . PASS END=165620254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 165620255 . C . PASS END=165620324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,994:0,81,255:40,0 chr1 165621215 . G . PASS END=165621272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,137,255:40,1 chr1 165623516 . C . PASS END=165623588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,142,255:40,0 chr1 165624605 . A . PASS END=165624630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,615:0,51,255:19,0 chr1 165624631 . C . PASS END=165624653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr1 165624654 . C . PASS END=165624656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 165624657 . G . PASS END=165624659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 165624660 . G . PASS END=165624662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 165624663 . C . PASS END=165624664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 165624665 . C . PASS END=165624718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1158:0,86,255:34,0 chr1 165624719 . G . PASS END=165624734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:24,0 chr1 165624735 . C . PASS END=165624735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 165624736 . C . PASS END=165624740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 165624741 . A . PASS END=165624741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:17,0 chr1 165632287 . T . PASS END=165632366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:62:0,120,1800:0,151,255:40,0 chr1 165632367 . T . PASS END=165632367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,7:63:71:63:0,71,1451:0,71,255:40,0 chr1 165632368 . C . PASS END=165632381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,119,1736:0,119,255:40,0 chr1 165634255 . C . PASS END=165634330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,146,255:40,0 chr1 165634331 . A . PASS END=165634349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:52:0,90,1350:0,120,255:40,0 chr1 165634350 . T . PASS END=165634364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:33:0,60,900:0,83,255:26,0 chr1 165634365 . T . PASS END=165634367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:57:32:0,57,855:0,96,255:19,0 chr1 165636546 . C . PASS END=165636687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,106,1620:0,106,255:40,0 chr1 165638163 . T . PASS END=165638171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,117,1800:0,117,255:40,1 chr1 165638172 . A . PASS END=165638172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:58:56:0,58,1845:0,58,255:40,0 chr1 165638173 . A . PASS END=165638250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,140,255:40,0 chr1 165638499 . C . PASS END=165638516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1142:0,96,255:32,0 chr1 165638517 . G . PASS END=165638517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr1 165638518 . A . PASS END=165638683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:36:0,90,1078:0,91,255:40,0 chr1 165638684 . A . PASS END=165638685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr1 165638686 . A . PASS END=165638687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 165648679 . C . PASS END=165648807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:33:0,96,1338:0,98,255:40,0 chr1 165648808 . C . PASS END=165648819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:69:37:0,69,1035:0,111,255:25,0 chr1 165649724 . C . PASS END=165649725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 165649726 . T . PASS END=165649730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 165649731 . C . PASS END=165649734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:22,0 chr1 165649735 . T . PASS END=165649735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,725:0,38,255:22,0 chr1 165649736 . G . PASS END=165649740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:25,0 chr1 165649741 . C . PASS END=165649778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1047:0,80,255:35,0 chr1 165649779 . T . PASS END=165649779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:34,0 chr1 165649780 . G . PASS END=165649870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:32:0,81,1215:0,93,255:40,0 chr1 165649871 . C . PASS END=165649880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,74,255:26,0 chr1 165649881 . A . PASS END=165649881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:23,0 chr1 165649882 . C . PASS END=165649895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 165649896 . G . PASS END=165649910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:15:0,42,598:0,45,255:16,0 chr1 165649911 . A . PASS END=165649920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 165651344 . C . PASS END=165651464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,1023:0,84,255:40,0 chr1 165651465 . C . PASS END=165651478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,110,1565:0,110,255:40,0 chr1 165652218 . C . PASS END=165652219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 165652220 . G . PASS END=165652220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 165652221 . C . PASS END=165652223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1139:0,90,255:31,0 chr1 165652224 . T . PASS END=165652224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 165652225 . G . PASS END=165652235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:34,0 chr1 165652236 . A . PASS END=165652272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:36:0,92,1305:0,92,255:40,0 chr1 165652273 . A G, 203.51 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,22,0:0,30,0:154:241,157,0,2016,157,2016:255,156,0:0,0:2.0351e+02,1.5351e+02,0.0000e+00,4.5000e+02,1.8828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,24:0,0,20,32 chr1 165652274 . A . PASS END=165652310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,134,255:40,0 chr1 165652311 . T . PASS END=165652347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1301:0,81,255:40,0 chr1 165664489 . C . PASS END=165664634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:40:0,81,1215:0,104,255:40,0 chr1 165667615 . C . PASS END=165667615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:13,0 chr1 165667616 . G . PASS END=165667623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 165667624 . G . PASS END=165667624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 165667625 . C . PASS END=165667638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:16,0 chr1 165667639 . C . PASS END=165667639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 165667640 . G . PASS END=165667642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 165667643 . A . PASS END=165667643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 165667644 . C . PASS END=165667658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,653:0,41,255:19,0 chr1 165667659 . G . PASS END=165667662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 165667663 . C . PASS END=165667663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 165667664 . C . PASS END=165667664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 165667665 . A . PASS END=165667665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:19,0 chr1 165667666 . C . PASS END=165667668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 165667669 . G . PASS END=165667669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 165667670 . G . PASS END=165667677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 165667678 . C . PASS END=165667678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:18,0 chr1 165667679 . G . PASS END=165667679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 165667680 . C . PASS END=165667681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 165667682 . G . PASS END=165667682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 165667683 . T . PASS END=165667693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 165667694 . C . PASS END=165667694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 165667695 . T . PASS END=165667695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 165667696 . G . PASS END=165667701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 165667702 . C . PASS END=165667719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 165667720 . T . PASS END=165667720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 165667721 . C . PASS END=165667721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 165667722 . A . PASS END=165667722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:15,0 chr1 165667723 . T . PASS END=165667723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 165667724 . G . PASS END=165667724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 165667725 . G . PASS END=165667741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 165667742 . C . PASS END=165667743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:12,0 chr1 165667744 . G . PASS END=165667749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr1 165667750 . T . PASS END=165667750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 165667751 . G . PASS END=165667780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 165667781 . T G, 49.72 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=2.637;FractionInformativeReads=0.917;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,5,0:0.455,0.000:11:1,3,0:5,2,0:48:84,0,50,150,215,365:139,0,200:5,0:4.9718e+01,6.8081e-05,5.3000e+01,1.5012e+02,2.4930e+02,3.6765e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,3,2:4,2,5,0 chr1 165667782 . G . PASS END=165667789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 165667790 . A . PASS END=165667790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 165667791 . A . PASS END=165667795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,402:0,33,255:11,0 chr1 165697260 . T . PASS END=165697358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:35:0,88,1104:0,88,255:40,0 chr1 165712404 . C . PASS END=165712509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:95:36:0,95,1284:0,95,255:40,0 chr1 165712510 . G . PASS END=165712542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:50:0,81,1215:0,150,255:40,0 chr1 165712543 . T . PASS END=165712548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:75:40:0,75,1125:0,88,255:26,0 chr1 165721336 . C . PASS END=165721336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr1 165721339 . A . PASS END=165721398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:75:0,120,1800:0,217,255:40,0 chr1 165721399 . A . PASS END=165721406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:93:0,120,1800:0,230,255:40,0 chr1 165723465 . C . PASS END=165723511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:90:0,120,1800:0,191,255:40,0 chr1 165728762 . C . PASS END=165728821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:66:0,120,1800:0,183,255:40,0 chr1 165737429 . A . PASS END=165737506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,130,255:40,0 chr1 165737719 . C . PASS END=165737725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:49:0,97,1441:0,97,255:40,0 chr1 165737726 . C . PASS END=165737726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:63:49:0,63,1278:0,63,255:40,0 chr1 165737727 . A . PASS END=165737729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,113,1517:0,113,255:40,0 chr1 165737730 . G . PASS END=165737730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,7:50:33:50:0,33,1246:0,33,255:40,0 chr1 165737731 . A . PASS END=165737741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,103,1484:0,103,255:40,0 chr1 165737742 . A . PASS END=165737752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,143,255:40,0 chr1 165737919 . C . PASS END=165737930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 165737931 . G . PASS END=165737933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,693:0,49,255:19,0 chr1 165737934 . C . PASS END=165737948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,939:0,64,255:23,0 chr1 165737949 . T . PASS END=165737949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 165737950 . A . PASS END=165737959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 165737960 . A . PASS END=165737960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:19,0 chr1 165737961 . G . PASS END=165737972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,61,255:26,0 chr1 165737973 . C . PASS END=165738135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:29:0,84,1057:0,86,255:40,0 chr1 165738136 . G . PASS END=165738141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:32:0,60,900:0,63,255:26,0 chr1 165797071 . A . PASS END=165797077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 165797078 . G . PASS END=165797078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 165797079 . G . PASS END=165797125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,847:0,69,255:25,0 chr1 165797126 . A . PASS END=165797126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 165797127 . G . PASS END=165797163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,878:0,61,255:24,0 chr1 165797164 . G . PASS END=165797164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 165797165 . G . PASS END=165797169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 165854581 . A . PASS END=165854616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:84:0,120,1800:0,215,255:40,0 chr1 165859441 . T . PASS END=165859441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:32,0 chr1 165859442 . C . PASS END=165859592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:33:0,87,1263:0,87,255:40,0 chr1 165859593 . C . PASS END=165859600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,104,255:34,0 chr1 165860463 . A . PASS END=165860559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:38:0,93,1318:0,93,255:40,0 chr1 165864682 . A . PASS END=165864683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 165864684 . G . PASS END=165864684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 165864685 . T . PASS END=165864685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr1 165864686 . T . PASS END=165864690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:22,0 chr1 165864691 . A . PASS END=165864691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 165864692 . T . PASS END=165864702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:27,0 chr1 165864703 . C . PASS END=165864842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1108:0,87,255:40,0 chr1 165864843 . C . PASS END=165864843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 165864844 . G . PASS END=165864866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr1 165864867 . A . PASS END=165864878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,903:0,67,255:26,0 chr1 165865427 . G . PASS END=165865427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 165865428 . A . PASS END=165865436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 165865437 . A . PASS END=165865437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 165865438 . C . PASS END=165865443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,808:0,66,255:26,0 chr1 165865444 . C . PASS END=165865512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:27:0,80,1016:0,80,255:40,0 chr1 165865513 . T . PASS END=165865513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:32,0 chr1 165865514 . G . PASS END=165865536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1260:0,95,255:36,0 chr1 165865537 . A . PASS END=165865537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 165865538 . T . PASS END=165865554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 165865555 . G . PASS END=165865564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 165865565 . C . PASS END=165865569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:56:24:0,56,855:0,56,255:19,0 chr1 165872419 . T . PASS END=165872516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,117,1800:0,117,255:40,0 chr1 165875158 . A . PASS END=165875206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,178,255:40,0 chr1 165876921 . T . PASS END=165876923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 165876924 . C . PASS END=165876924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,820:0,53,255:27,0 chr1 165876925 . C . PASS END=165876925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:29,0 chr1 165876926 . A . PASS END=165876926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:28,0 chr1 165876927 . T . PASS END=165876931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1092:0,87,255:29,0 chr1 165876932 . C . PASS END=165876932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr1 165876933 . T . PASS END=165876934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 165876935 . A . PASS END=165876935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 165876936 . T . PASS END=165877046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,1127:0,82,255:40,0 chr1 165877047 . G . PASS END=165877047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:28,0 chr1 165877048 . C . PASS END=165877048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 165877049 . A . PASS END=165877049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:28,0 chr1 165877050 . G . PASS END=165877050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 165877051 . G . PASS END=165877060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:26,0 chr1 166029846 . T . PASS END=166029900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,135,255:40,0 chr1 166039478 . C . PASS END=166039479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 166039480 . A . PASS END=166039480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 166039481 . C . PASS END=166039525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,607:0,51,255:19,0 chr1 166039526 . C . PASS END=166039526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 166039527 . A . PASS END=166039531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 166039532 . G . PASS END=166039532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 166039533 . A . PASS END=166039533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 166039534 . C . PASS END=166039534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 166039535 . C . PASS END=166039550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,782:0,50,255:19,0 chr1 166039551 . T . PASS END=166039562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 166039563 . A . PASS END=166039563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 166039564 . G . PASS END=166039570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 166039571 . A . PASS END=166039571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:22,2 chr1 166039572 . G . PASS END=166039572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:8:26:0,8,794:0,8,255:22,2 chr1 166039573 . G . PASS END=166039573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr1 166039574 . G . PASS END=166039577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 166039578 . A . PASS END=166039579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr1 166039580 . G . PASS END=166039596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 166039597 . G . PASS END=166039637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1041:0,80,255:32,0 chr1 166039638 . G . PASS END=166039638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 166039639 . C . PASS END=166039644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1149:0,93,255:31,0 chr1 166039645 . G . PASS END=166039645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 166039646 . C . PASS END=166039860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1157:0,83,255:37,0 chr1 166039861 . A . PASS END=166039897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:35,0 chr1 166039898 . C G, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,12,0:0,25,0:108:196,111,0,1427,111,1427:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,18:0,0,16,21 chr1 166039899 . A . PASS END=166039935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,99,1280:0,105,255:40,0 chr1 166039936 . C . PASS END=166039963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,88,255:38,0 chr1 166039964 . T . PASS END=166039982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 166039983 . G . PASS END=166039988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 166039989 . T . PASS END=166040000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 166135223 . A . PASS END=166135224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 166135225 . G . PASS END=166135225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 166135226 . C . PASS END=166135232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 166135233 . C . PASS END=166135249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 166135250 . A . PASS END=166135250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 166135251 . A . PASS END=166135267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 166135268 . G . PASS END=166135268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 166135269 . C . PASS END=166135289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:13,0 chr1 166135290 . A . PASS END=166135290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 166135291 . G . PASS END=166135316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 166135317 . T . PASS END=166135317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 166135318 . G . PASS END=166135346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 166135347 . G . PASS END=166135375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 166135376 . G . PASS END=166135376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 166135377 . T . PASS END=166135381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 166135382 . T . PASS END=166135382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 166135383 . C . PASS END=166135392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 166135393 . G . PASS END=166135393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 166135394 . G . PASS END=166135407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 166135408 . G . PASS END=166135422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 166135423 . G . PASS END=166135445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 166135446 . G . PASS END=166135476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 166135477 . A . LowGQ END=166135485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,100:0,0,104:3,0 chr1 166810194 . A . PASS END=166810311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1132:0,86,255:40,0 chr1 166810312 . C . PASS END=166810325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:25,0 chr1 166815849 . G . PASS END=166815962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1155:0,80,255:40,0 chr1 166815963 . G . PASS END=166815963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:29,0 chr1 166815964 . T . PASS END=166815969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,92,255:30,0 chr1 166815970 . C . PASS END=166815975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,88,255:26,0 chr1 166816731 . A . PASS END=166816829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,117,1755:0,140,255:40,0 chr1 166818175 . A . PASS END=166818177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 166818178 . A . PASS END=166818178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 166818179 . T . PASS END=166818184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:26,0 chr1 166818185 . A . PASS END=166818191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 166818192 . G . PASS END=166818192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 166818193 . T . PASS END=166818260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:28:0,83,1041:0,83,255:38,0 chr1 166818261 . A . PASS END=166818261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr1 166818262 . G . PASS END=166818310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:33:0,80,1194:0,80,255:36,0 chr1 166818311 . T . PASS END=166818311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 166818312 . G . PASS END=166818312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 166818313 . A . PASS END=166818313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:25,0 chr1 166818314 . G . PASS END=166818314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 166818315 . G . PASS END=166818334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,65,255:26,0 chr1 166818335 . C . PASS END=166818336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 166818337 . T . PASS END=166818357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:24,0 chr1 166818358 . T . PASS END=166818358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr1 166818359 . C . PASS END=166818373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 166818374 . A . PASS END=166818374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 166818375 . G . PASS END=166818383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 166818384 . T . PASS END=166818384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 166818385 . T . PASS END=166818410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,784:0,66,255:24,0 chr1 166818411 . A . PASS END=166818411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 166818412 . G . PASS END=166818414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 166818415 . A . PASS END=166818415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 166818416 . C . PASS END=166818422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 166818423 . G . PASS END=166818428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,978:0,81,255:30,0 chr1 166818429 . A . PASS END=166818452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,886:0,64,255:26,0 chr1 166818453 . G . PASS END=166818453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:25,0 chr1 166818454 . A . PASS END=166818483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:26,0 chr1 166818484 . A . PASS END=166818484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 166818485 . G . PASS END=166818490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 166818491 . A . PASS END=166818491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 166818492 . G . PASS END=166818513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:23,0 chr1 166818514 . A . PASS END=166818514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,784:0,41,255:22,0 chr1 166818515 . C . PASS END=166818525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,793:0,69,255:24,0 chr1 166818526 . T . PASS END=166818526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 166818527 . G . PASS END=166818532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 166818533 . A . PASS END=166818533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 166818534 . C . PASS END=166818554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:24,0 chr1 166818555 . A . PASS END=166818555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 166818556 . T . PASS END=166818572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,840:0,72,255:24,0 chr1 166818573 . G . PASS END=166818574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 166818575 . C . PASS END=166818579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:25,0 chr1 166818580 . A . PASS END=166818580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr1 166818581 . G . PASS END=166818624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,892:0,61,255:24,0 chr1 166818625 . T . PASS END=166818626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 166818627 . A . PASS END=166818667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:26,0 chr1 166818668 . G . PASS END=166818668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 166818669 . A . PASS END=166818682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 166818683 . T . PASS END=166818683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr1 166818684 . C . PASS END=166818699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:22,0 chr1 166818700 . A . PASS END=166818700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 166818701 . A . PASS END=166818705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 166818706 . A . PASS END=166818706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:22,0 chr1 166818707 . C . PASS END=166818714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,771:0,69,255:23,0 chr1 166818715 . A . PASS END=166818715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 166818716 . G . PASS END=166818731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,878:0,62,255:25,0 chr1 166818732 . A . PASS END=166818732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:22,0 chr1 166818733 . G . PASS END=166818733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 166818734 . C . PASS END=166818734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,868:0,44,255:23,0 chr1 166818735 . T . PASS END=166818739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 166818740 . T . PASS END=166818740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,631:0,25,255:19,0 chr1 166818741 . T . PASS END=166818741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:20,0 chr1 166818742 . G . PASS END=166818744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 166818745 . G . PASS END=166818745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 166818746 . T . PASS END=166818752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 166818753 . A . PASS END=166818753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 166818754 . T . PASS END=166818760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr1 166818761 . A . PASS END=166818762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 166818763 . G . PASS END=166818766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 166818767 . T . PASS END=166818767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr1 166818768 . G . PASS END=166818773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:21,0 chr1 166818774 . T . PASS END=166818774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 166818775 . C . PASS END=166818777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 166818778 . T . PASS END=166818781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,806:0,53,255:19,0 chr1 166818782 . G . PASS END=166818786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 166818787 . A . PASS END=166818787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 166818788 . A . PASS END=166818825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,768:0,62,255:26,0 chr1 166818826 . A . PASS END=166818827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 166818828 . A . PASS END=166818828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 166818829 . A . PASS END=166818829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 166818830 . A . PASS END=166818839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 166818840 . T . PASS END=166818841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 166818842 . C . PASS END=166818842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 166818843 . C . PASS END=166818844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 166818845 . G . PASS END=166818857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1008:0,68,255:26,0 chr1 166818858 . G . PASS END=166818859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 166818860 . T . PASS END=166818862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 166818863 . G . PASS END=166818863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 166818864 . C . PASS END=166818864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr1 166818865 . G . PASS END=166818949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1118:0,83,255:38,0 chr1 166818950 . T . PASS END=166818950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1298:0,70,255:36,0 chr1 166818951 . G . PASS END=166818996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:36:0,89,1172:0,89,255:39,0 chr1 166818997 . A . PASS END=166818997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr1 166818998 . A . PASS END=166819000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1266:0,91,255:34,0 chr1 166819001 . A . PASS END=166819001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1094:0,44,255:31,0 chr1 166819002 . C . PASS END=166819063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1177:0,80,255:34,0 chr1 166819064 . T . PASS END=166819064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1107:0,69,255:32,0 chr1 166819065 . T . PASS END=166819073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:34,0 chr1 166819074 . A . PASS END=166819074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 166819075 . C . PASS END=166819082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,95,255:28,0 chr1 166819083 . C . PASS END=166819083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:26,0 chr1 166819084 . C . PASS END=166819086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 166819087 . C . PASS END=166819087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 166819088 . G . PASS END=166819092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 166819093 . A . PASS END=166819093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 166819094 . G . PASS END=166819107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 166819108 . T . PASS END=166819108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 166819109 . G . PASS END=166819115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 166819116 . C . PASS END=166819123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 166819124 . C . PASS END=166819124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 166819125 . C . PASS END=166819134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,83,255:26,0 chr1 166819135 . G . PASS END=166819137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 166819138 . T . PASS END=166819139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 166819140 . A . PASS END=166819149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 166819150 . T . PASS END=166819151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 166819152 . A . PASS END=166819155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 166819156 . A . PASS END=166819157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 166819158 . G . PASS END=166819181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1017:0,87,255:30,0 chr1 166819182 . C . PASS END=166819194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 166819195 . C . PASS END=166819214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 166819215 . A . PASS END=166819215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 166819216 . T . PASS END=166819217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 166819218 . C . PASS END=166819226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,74,255:26,0 chr1 166819227 . A . PASS END=166819234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 166819235 . C . PASS END=166819235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 166819236 . C . PASS END=166819237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 166819238 . G . PASS END=166819238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:25,0 chr1 166819239 . G . PASS END=166819242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 166819243 . A . PASS END=166819245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 166819246 . C . PASS END=166819266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:30,0 chr1 166819267 . C . PASS END=166819267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 166819268 . C . PASS END=166819276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 166819277 . C . PASS END=166819277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 166819278 . A . PASS END=166819283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1108:0,80,255:29,0 chr1 166819284 . A . PASS END=166819284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1045:0,46,255:25,0 chr1 166819285 . C . PASS END=166819296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 166819297 . T . PASS END=166819338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,68,255:26,0 chr1 166819339 . T . PASS END=166819352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 166819353 . C . PASS END=166819357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 166819358 . G . PASS END=166819646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:34:0,86,1306:0,86,255:40,0 chr1 166826804 . T . PASS END=166826810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:33,0 chr1 166826811 . A . PASS END=166826928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:34:0,91,1243:0,91,255:40,0 chr1 166826929 . T . PASS END=166826942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:26:0,60,900:0,78,255:25,0 chr1 166826943 . A . PASS END=166826953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:21:0,45,675:0,63,255:18,0 chr1 166826954 . C . PASS END=166826954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:15,0 chr1 166826955 . A . PASS END=166826956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 166827356 . C . PASS END=166827356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 166827357 . T . PASS END=166827357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 166827358 . G . PASS END=166827371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:26,0 chr1 166827372 . A . PASS END=166827374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,887:0,81,255:27,0 chr1 166827375 . T . PASS END=166827375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 166827376 . C . PASS END=166827395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:29,0 chr1 166827396 . A . PASS END=166827396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 166827397 . A . PASS END=166827399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 166827400 . A . PASS END=166827400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:29,0 chr1 166827401 . T . PASS END=166827449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1083:0,80,255:33,0 chr1 166827450 . T . PASS END=166827450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:29,0 chr1 166827451 . C . PASS END=166827473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1008:0,80,255:30,0 chr1 166827474 . G . PASS END=166827481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr1 166827482 . A . PASS END=166827488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:25:0,45,675:0,75,255:19,0 chr1 166827489 . C . PASS END=166827496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:30:19:0,30,450:0,57,255:13,0 chr1 166827497 . G . PASS END=166827498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:27:18:0,27,405:0,54,255:9,0 chr1 166827499 . G . PASS END=166827501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:10,0 chr1 166827502 . C . PASS END=166827504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 166827505 . T . PASS END=166827505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 166827506 . A . PASS END=166827517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,341:0,27,255:9,0 chr1 166827518 . G . PASS END=166827518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 166829423 . C . PASS END=166829425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 166829426 . T . PASS END=166829426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 166829427 . C . PASS END=166829431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,909:0,78,255:26,0 chr1 166829432 . A . PASS END=166829432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:25,0 chr1 166829433 . A . PASS END=166829435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 166829436 . T . PASS END=166829436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 166829437 . G . PASS END=166829574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:31:0,93,1157:0,93,255:40,0 chr1 166831440 . C . PASS END=166831440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 166831441 . T . PASS END=166831441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 166831442 . C . PASS END=166831445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:26,0 chr1 166831446 . A . PASS END=166831615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:27:0,81,1016:0,81,255:40,0 chr1 166831616 . C . PASS END=166831616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:37,0 chr1 166831617 . T . PASS END=166831646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1305:0,108,255:37,0 chr1 166831647 . A . PASS END=166831649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:39:0,72,1080:0,117,255:26,0 chr1 166833061 . A . PASS END=166833137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:83:38:0,83,1279:0,83,255:40,0 chr1 166833138 . A . PASS END=166833138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1390:0,68,255:33,0 chr1 166833139 . A . PASS END=166833152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,107,255:35,0 chr1 166833153 . C . PASS END=166833158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:32:0,63,945:0,63,255:26,0 chr1 166838682 . C . PASS END=166838747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,139,255:40,0 chr1 166839000 . C . PASS END=166839091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:79:0,120,1800:0,193,255:40,0 chr1 166845397 . T . PASS END=166845397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 166845398 . G . PASS END=166845398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 166845399 . T . PASS END=166845410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 166845411 . C . PASS END=166845419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 166845420 . C . PASS END=166845423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 166845424 . C . PASS END=166845424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 166845425 . T . PASS END=166845425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 166845426 . T . PASS END=166845431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 166845432 . C . PASS END=166845432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 166845433 . T . PASS END=166845433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 166845434 . T . PASS END=166845434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:28,0 chr1 166845435 . C . PASS END=166845436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 166845437 . T . PASS END=166845437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 166845438 . G . PASS END=166845442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 166845443 . C . PASS END=166845443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 166845444 . C . PASS END=166845462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:31,0 chr1 166845463 . G . PASS END=166845469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 166845470 . T . PASS END=166845470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 166888525 . T . PASS END=166888627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:53:0,120,1800:0,129,255:40,0 chr1 166889944 . G . PASS END=166889969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:11,0 chr1 166889970 . T . PASS END=166889970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 166889971 . C . PASS END=166889971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 166889972 . T . PASS END=166889973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 166889974 . C . PASS END=166889974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 166889975 . T . PASS END=166889975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 166889976 . T . PASS END=166889999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 166890000 . G . PASS END=166890000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 166890001 . G . PASS END=166890006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 166890007 . G . PASS END=166890007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 166890008 . C . PASS END=166890010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 166890011 . C . PASS END=166890017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 166890018 . A . PASS END=166890020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 166890021 . G . PASS END=166890024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 166890025 . G . PASS END=166890026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 166890027 . G . PASS END=166890027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:12,0 chr1 166890028 . G . PASS END=166890028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 166890029 . G . PASS END=166890036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 166890037 . C . PASS END=166890039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 166890040 . C . PASS END=166890040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 166890041 . T . PASS END=166890062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:12,0 chr1 166890063 . C . PASS END=166890063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 166890064 . G . PASS END=166890077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:13,0 chr1 166890078 . C . PASS END=166890098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 166890099 . C . PASS END=166890099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 166890100 . G . PASS END=166890118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:14,0 chr1 166890119 . G . PASS END=166890119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 166890120 . G . PASS END=166890124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 166890125 . C . PASS END=166890144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 166890145 . G . PASS END=166890154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:15,0 chr1 166890155 . A . PASS END=166890155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 166890156 . G . PASS END=166890174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 166890175 . T . PASS END=166890185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,460:0,31,255:13,0 chr1 166890186 . G . PASS END=166890208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 166890209 . T . PASS END=166890220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 166890221 . T . PASS END=166890221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 166890222 . G . PASS END=166890230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 166890231 . G . PASS END=166890231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 166890232 . C . PASS END=166890232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 166890233 . G . PASS END=166890234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 166890235 . G . PASS END=166890235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 166890236 . C . PASS END=166890236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 166890237 . T . PASS END=166890237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 166890238 . G . PASS END=166890240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 166890241 . C . PASS END=166890243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 166890244 . G . PASS END=166890249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 166890250 . G . PASS END=166890264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:12,0 chr1 166890265 . T . PASS END=166890287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:8:0,20,315:0,20,255:9,0 chr1 166890288 . C . PASS END=166890294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 166890295 . C . PASS END=166890300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 166890301 . G . PASS END=166890331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 166890332 . G . PASS END=166890332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 166890333 . G . PASS END=166890371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr1 166890372 . C . PASS END=166890387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 166890388 . C . PASS END=166890399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 166890400 . C . PASS END=166890432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,258:0,27,255:9,0 chr1 166890433 . G . PASS END=166890459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 166890460 . G . PASS END=166890462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 166890463 . G . PASS END=166890465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 166890466 . C . PASS END=166890468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 166890469 . G . PASS END=166890471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 166890472 . C . PASS END=166890476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 166890477 . C . PASS END=166890494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 166890495 . C . PASS END=166890495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 166890496 . T . PASS END=166890506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 166890507 . G . PASS END=166890509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 166890510 . G . PASS END=166890510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:13,0 chr1 166890511 . C . PASS END=166890516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,521:0,45,255:19,0 chr1 166890517 . G . PASS END=166890547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,717:0,63,255:23,0 chr1 166890548 . A . PASS END=166890548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,750:0,50,255:20,0 chr1 166890549 . T . PASS END=166890566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,671:0,63,255:21,0 chr1 166890567 . C . PASS END=166890567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 166890568 . C . PASS END=166890574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 166890575 . A . PASS END=166890575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 166890576 . A . PASS END=166890590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:20,0 chr1 166890591 . G . PASS END=166890592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:19,0 chr1 166890593 . A . PASS END=166890596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 166890597 . C . PASS END=166890616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:19,0 chr1 166891609 . T . PASS END=166891687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,146,255:40,0 chr1 166891830 . C . PASS END=166892046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:36:0,90,1263:0,90,255:40,0 chr1 166892428 . T . PASS END=166892429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr1 166896304 . A . PASS END=166896417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1117:0,80,255:40,0 chr1 166904538 . C . PASS END=166904574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,515:0,45,255:19,0 chr1 166904575 . G . PASS END=166904586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 166904587 . C . PASS END=166904587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 166904588 . G . PASS END=166904590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 166904591 . T . PASS END=166904594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 166904595 . C . PASS END=166904600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 166904601 . G . PASS END=166904603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 166904604 . T . PASS END=166904607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 166904608 . A . PASS END=166904608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 166904609 . G . PASS END=166904612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 166904613 . A . PASS END=166904613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 166904614 . G . PASS END=166904633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr1 166904634 . C . PASS END=166904648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,674:0,44,255:19,0 chr1 166904649 . A . PASS END=166904657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:13,0 chr1 166904658 . G . PASS END=166904665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:9,0 chr1 166904666 . G . PASS END=166904666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:7,0 chr1 166904667 . A . PASS END=166904686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 166904687 . G . PASS END=166904687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 166904688 . C . PASS END=166904692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 166904693 . G . PASS END=166904714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,188:6,0 chr1 166905828 . A . PASS END=166905835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr1 166905836 . G . PASS END=166905869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:24,0 chr1 166905870 . G . PASS END=166905873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 166905874 . A . PASS END=166905874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 166905875 . T . PASS END=166905878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 166905879 . A . PASS END=166905882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 166905883 . G . PASS END=166905883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 166905884 . C . PASS END=166905885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 166905886 . G . PASS END=166905898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:30,0 chr1 166905899 . C . PASS END=166905899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 166905900 . A . PASS END=166905909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 166905910 . G . PASS END=166905910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 166905911 . C . PASS END=166905928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1127:0,90,255:31,0 chr1 166905929 . A . PASS END=166905929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 166905930 . A . PASS END=166905942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:29,0 chr1 166905943 . G . PASS END=166905951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 166905952 . C . PASS END=166905954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 166905955 . C . PASS END=166905972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,820:0,64,255:26,0 chr1 166905973 . C . PASS END=166905974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 166908751 . C . PASS END=166908807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,191,255:40,0 chr1 166925970 . C . PASS END=166925977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1186:0,83,255:32,0 chr1 166925978 . A . PASS END=166925978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:31,0 chr1 166925979 . G . PASS END=166926047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1188:0,84,255:40,0 chr1 166926048 . C . PASS END=166926048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr1 166926049 . G . PASS END=166926050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr1 166926051 . T . PASS END=166926051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 166926052 . G . PASS END=166926055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 166926056 . C . PASS END=166926070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:24:0,69,930:0,70,255:24,0 chr1 166926071 . C . PASS END=166926071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 166926072 . C . PASS END=166926075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 166926076 . T . PASS END=166926076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 166926077 . T . PASS END=166926086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 166926087 . C . PASS END=166926088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:23,0 chr1 166926089 . T . PASS END=166926089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 166927006 . C . PASS END=166927008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:18,0 chr1 166927009 . G . PASS END=166927014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,648:0,60,255:23,0 chr1 166927015 . T . PASS END=166927015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 166927016 . C . PASS END=166927021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr1 166927022 . C . PASS END=166927034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 166927035 . T . PASS END=166927035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 166927036 . A . PASS END=166927040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 166927041 . T . PASS END=166927041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 166927042 . C . PASS END=166927112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1091:0,85,255:35,0 chr1 166927113 . A . PASS END=166927113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1045:0,63,255:27,0 chr1 166927114 . A . PASS END=166927124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:29,0 chr1 166927125 . C . PASS END=166927125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 166927126 . A . PASS END=166927127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 166927128 . T . PASS END=166927128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 166927129 . C . PASS END=166927132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,991:0,87,255:29,0 chr1 166927133 . G . PASS END=166927133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 166927134 . T . PASS END=166927138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr1 166927139 . C . PASS END=166927148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 166927149 . G . PASS END=166927149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 166927150 . A . PASS END=166927150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,944:0,76,255:30,0 chr1 166927151 . T . PASS END=166927157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:30,0 chr1 166927158 . C . PASS END=166927158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 166927159 . G . PASS END=166927168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:30,0 chr1 166927169 . C . PASS END=166927173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,83,255:26,0 chr1 166927174 . C . PASS END=166927177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 166927178 . G . PASS END=166927213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,947:0,65,255:26,0 chr1 166927214 . C . PASS END=166927216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 166927217 . C . PASS END=166927219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,937:0,65,255:26,0 chr1 166927220 . C . PASS END=166927315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1180:0,83,255:36,0 chr1 166927316 . G . PASS END=166927337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,931:0,75,255:25,0 chr1 166927338 . G . PASS END=166927338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:23,0 chr1 166942139 . C . PASS END=166942139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 166942140 . T . PASS END=166942140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 166942141 . T . PASS END=166942143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 166942144 . G A, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.805;ReadPosRankSum=3.147;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:7,9,0:9,7,0:48:85,0,50,572,572,1144:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,10,6:10,6,7,9 chr1 166942145 . T . PASS END=166942181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1304:0,99,255:38,0 chr1 166942182 . C . PASS END=166942203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,104,1467:0,104,255:39,0 chr1 166942204 . T . PASS END=166942213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:37:0,75,1125:0,104,255:26,0 chr1 166942214 . C . PASS END=166942229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1216:0,83,255:29,0 chr1 166942419 . C . PASS END=166942483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:40:0,84,1407:0,84,255:40,0 chr1 166942484 . A . PASS END=166942484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1441:0,79,255:33,0 chr1 166942485 . T . PASS END=166942485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,108,1620:0,129,255:36,0 chr1 166944460 . C . PASS END=166944505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:50:0,120,1800:0,128,255:40,0 chr1 166954583 . A . PASS END=166954585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,179,255:40,0 chr1 166958590 . A . PASS END=166958613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1141:0,83,255:37,0 chr1 166958614 . A . PASS END=166958614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:37,0 chr1 166958615 . A . PASS END=166958704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:37:0,94,1421:0,94,255:40,0 chr1 166958705 . G . PASS END=166958713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr1 166958714 . A . PASS END=166958714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 166958715 . C . PASS END=166958721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 166958974 . C . PASS END=166959027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1318:0,84,255:40,0 chr1 166959028 . G . PASS END=166959028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:30,0 chr1 166959029 . C . PASS END=166959052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 166959053 . C . PASS END=166959066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 166960615 . A . PASS END=166960714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:34:0,89,1167:0,89,255:40,0 chr1 166961923 . C . PASS END=166961924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:30,0 chr1 166961925 . C . PASS END=166961947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:34:0,85,1188:0,85,255:40,0 chr1 166961948 . T . PASS END=166962067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:41:0,96,1459:0,96,255:40,0 chr1 166962068 . T . PASS END=166962068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1451:0,74,255:33,0 chr1 166962069 . A . PASS END=166962078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:38:0,97,1335:0,97,255:34,0 chr1 166963265 . G . PASS END=166963306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,227,255:40,0 chr1 166973417 . G . PASS END=166973541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:52:0,120,1800:0,156,255:40,0 chr1 166974313 . T . PASS END=166974367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,183,255:40,0 chr1 166974493 . A . PASS END=166974631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:35:0,84,1260:0,98,255:40,0 chr1 166974632 . A . PASS END=166974634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 166985459 . G . PASS END=166985521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:91:0,120,1800:0,227,255:40,0 chr1 166987064 . G . PASS END=166987069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:32,0 chr1 166987070 . C . PASS END=166987070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 166987071 . A . PASS END=166987196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:32:0,96,1217:0,96,255:40,0 chr1 166990322 . A . PASS END=166990397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:83:0,120,1800:0,235,255:40,0 chr1 166990905 . G . PASS END=166991092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:45:0,99,1631:0,99,255:40,0 chr1 167023571 . T . PASS END=167023703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:88:33:0,88,1219:0,88,255:40,0 chr1 167024213 . G . PASS END=167024222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1086:0,87,255:34,0 chr1 167024223 . C . PASS END=167024223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 167024224 . C . PASS END=167024318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1241:0,81,255:40,0 chr1 167024319 . T . PASS END=167024336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:24:0,60,900:0,72,255:25,0 chr1 167024337 . C . PASS END=167024344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,53,255:19,0 chr1 167024345 . G . PASS END=167024345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:15,0 chr1 167024346 . A . PASS END=167024348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:16,0 chr1 167024967 . G . PASS END=167024972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1218:0,96,255:32,0 chr1 167024973 . T . PASS END=167024973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 167024974 . G . PASS END=167025086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1211:0,87,255:40,0 chr1 167032819 . C . PASS END=167032846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:25,0 chr1 167032847 . C . PASS END=167032847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 167032848 . A . PASS END=167032850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:26,0 chr1 167032851 . A . PASS END=167032866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 167032867 . A . PASS END=167032867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 167032868 . G . PASS END=167032869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1155:0,90,255:30,0 chr1 167032870 . T . PASS END=167032870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 167032871 . G . PASS END=167032900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1202:0,93,255:31,0 chr1 167032901 . T . PASS END=167032901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 167032902 . T . PASS END=167032910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 167032911 . A . PASS END=167032911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 167032912 . G . PASS END=167032927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:28,0 chr1 167032928 . A . PASS END=167032956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,67,255:26,0 chr1 167032957 . C . PASS END=167032962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,759:0,50,255:19,0 chr1 167032963 . T . PASS END=167032963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 167032964 . G . PASS END=167032974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,692:0,46,255:19,0 chr1 167038159 . C . PASS END=167038169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:22:0,64,791:0,64,255:26,0 chr1 167038170 . A . PASS END=167038175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,952:0,81,255:29,0 chr1 167038176 . A . PASS END=167038176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:28,0 chr1 167038177 . C . PASS END=167038177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167038178 . A . PASS END=167038178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 167038179 . C . PASS END=167038179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 167038180 . G . PASS END=167038180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 167038181 . T . PASS END=167038186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 167038187 . G . PASS END=167038187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 167038188 . G . PASS END=167038375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:34:0,88,1382:0,88,255:40,0 chr1 167042622 . C . PASS END=167042622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,884:0,47,255:25,0 chr1 167042623 . G . PASS END=167042629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,951:0,65,255:26,0 chr1 167042630 . T . PASS END=167042645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:29,0 chr1 167042646 . C . PASS END=167042646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr1 167042647 . C . PASS END=167042648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 167042649 . T . PASS END=167042649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,991:0,71,255:27,0 chr1 167042650 . T . PASS END=167042705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1207:0,87,255:36,0 chr1 167042706 . A . PASS END=167042706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:30,0 chr1 167042707 . C . PASS END=167042711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr1 167042712 . T . PASS END=167042712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1244:0,72,255:32,0 chr1 167042713 . C . PASS END=167042724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1234:0,102,255:35,0 chr1 167042725 . C . PASS END=167042761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1143:0,85,255:35,0 chr1 167042762 . C T, 50.00 PASS DP=32;MQ=249.63;MQRankSum=4.202;ReadPosRankSum=0.886;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:8,6,0:8,10,0:48:85,0,50,572,572,1144:255,0,255:16,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,11,8,8:5,11,8,8 chr1 167042763 . G . PASS END=167042776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 167051482 . C . PASS END=167051548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:86:0,120,1800:0,214,255:40,0 chr1 167057263 . A . PASS END=167057268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 167057269 . A . PASS END=167057269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 167057270 . G . PASS END=167057278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 167057279 . T . PASS END=167057279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 167057280 . C . PASS END=167057292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1094:0,83,255:34,0 chr1 167057293 . T . PASS END=167057293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 167057294 . T . PASS END=167057330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1217:0,86,255:34,0 chr1 167057331 . T . PASS END=167057331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 167057332 . G . PASS END=167057473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1192:0,83,255:37,0 chr1 167057474 . T . PASS END=167057476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:24,0 chr1 167057477 . C . PASS END=167057482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 167057483 . C . PASS END=167057483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr1 167057484 . C . PASS END=167057495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:29,0 chr1 167057496 . A . PASS END=167057515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 167057516 . A . PASS END=167057547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,923:0,64,255:25,0 chr1 167057548 . T . PASS END=167057548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 167057549 . G . PASS END=167057552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 167057553 . G A, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,10,0:0,11,0:60:148,63,0,814,63,814:255,63,0:0,0:1.1020e+02,6.0204e+01,4.1418e-06,4.5000e+02,9.4974e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,9:0,0,7,14 chr1 167057554 . A . PASS END=167057554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 167057555 . C . PASS END=167057555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 167057556 . C . PASS END=167057557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,799:0,33,255:23,0 chr1 167057558 . T . PASS END=167057558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,773:0,72,255:24,0 chr1 167057559 . T . PASS END=167057559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 167057560 . G . PASS END=167057560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 167057561 . A . PASS END=167057561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 167057562 . A . PASS END=167057581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 167057582 . C . PASS END=167057584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 167057585 . T . PASS END=167057585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 167057586 . G . PASS END=167057586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 167057587 . G . PASS END=167057587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 167057588 . C . PASS END=167057588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 167057589 . A . PASS END=167057591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 167057592 . G . PASS END=167057592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167057593 . G . PASS END=167057593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 167057594 . C . PASS END=167057594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 167057595 . T . PASS END=167057595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 167057596 . A . PASS END=167057597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 167057598 . T . PASS END=167057598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,904:0,73,255:26,0 chr1 167057599 . T . PASS END=167057600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 167057601 . A G, 49.31 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=-1.509;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:7,4,0:9,8,0:47:84,0,47,184,184,184:255,0,255:15,0:4.9307e+01,9.4485e-05,5.0000e+01,1.8408e+02,2.1885e+02,1.8709e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,5,5,7:6,10,7,5 chr1 167057602 . C . PASS END=167057602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167057603 . T . PASS END=167057603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1008:0,43,255:26,0 chr1 167057604 . A . PASS END=167057605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 167057606 . T . PASS END=167057606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:28,0 chr1 167057607 . T . PASS END=167057619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1028:0,82,255:32,0 chr1 167057620 . T C, 46.23 PASS DP=36;MQ=249.70;MQRankSum=4.907;ReadPosRankSum=-0.593;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,13,0:0.361,0.000:36:9,5,0:14,8,0:45:81,0,47,181,181,181:255,0,255:23,0:4.6234e+01,1.4678e-04,5.0000e+01,1.8100e+02,2.1577e+02,1.8401e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,11,4,9:10,13,8,5:167057620 chr1 167057621 . T . PASS END=167057623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1270:0,92,255:32,0 chr1 167057624 . A . PASS END=167057624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:30,0 chr1 167057625 . T . PASS END=167057625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 167057626 . A G, 46.23 PASS DP=36;MQ=249.70;MQRankSum=4.865;ReadPosRankSum=-0.836;FractionInformativeReads=0.972;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,13,0:0.371,0.000:35:9,6,0:13,7,0:45:81,0,47,181,181,181:255,0,255:22,0:4.6234e+01,1.4678e-04,5.0000e+01,1.8100e+02,2.1577e+02,1.8401e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,11,5,8:10,12,8,5:167057620 chr1 167057627 . C . PASS END=167057635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 167057636 . G A, 38.11 PASS DP=36;MQ=249.70;MQRankSum=4.705;ReadPosRankSum=0.412;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,11,0:0.306,0.000:36:10,5,0:15,6,0:38:73,0,50,393,857,1251:255,0,255:25,0:3.8111e+01,6.9276e-04,5.3001e+01,3.9346e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,3,8:14,11,5,6:167057620 chr1 167057637 . A . PASS END=167057649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:35,0 chr1 167057650 . G . PASS END=167057650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:28,0 chr1 167057651 . C . PASS END=167057675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,86,255:31,0 chr1 167057676 . C . PASS END=167057676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:27,0 chr1 167057677 . C . PASS END=167057678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 167057679 . T . PASS END=167057679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr1 167057680 . C . PASS END=167057684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 167057685 . T . PASS END=167057685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 167057686 . C . PASS END=167057686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 167057687 . T . PASS END=167057687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167057688 . T . PASS END=167057688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167057689 . A . PASS END=167057689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 167057690 . A . PASS END=167057692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167057693 . T . PASS END=167057693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,977:0,73,255:28,0 chr1 167057694 . A . PASS END=167057704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 167057705 . G . PASS END=167057705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 167057706 . A . PASS END=167057707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 167057708 . G . PASS END=167057708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 167057709 . A . PASS END=167057710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 167057711 . A . PASS END=167057711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 167057712 . A . PASS END=167057715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 167057716 . G . PASS END=167057716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 167057717 . G . PASS END=167057724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:31,0 chr1 167057725 . G A, 45.19 PASS DP=35;MQ=250.00;MQRankSum=4.673;ReadPosRankSum=-0.089;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,11,0:0.314,0.000:35:11,5,0:13,6,0:44:80,0,47,180,180,180:255,0,255:24,0:4.5185e+01,1.7499e-04,5.0000e+01,1.7996e+02,2.1473e+02,1.8297e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,12,3,8:11,13,5,6 chr1 167057726 . T . PASS END=167057737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1294:0,89,255:34,0 chr1 167057738 . G . PASS END=167057738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:31,0 chr1 167057739 . G . PASS END=167057765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:31,0 chr1 167057766 . G A, 45.19 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=-2.032;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:8,7,0:10,7,0:44:80,0,47,180,180,180:255,0,255:16,0:4.5185e+01,1.7499e-04,5.0000e+01,1.7996e+02,2.1473e+02,1.8297e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,6,7,7:8,10,6,8 chr1 167057767 . G . PASS END=167057803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1125:0,80,255:39,0 chr1 167057804 . G . PASS END=167057884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:85:34:0,85,1180:0,85,255:39,0 chr1 167057885 . C . PASS END=167057905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:24:0,69,1035:0,72,255:24,0 chr1 167057906 . T . PASS END=167057906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 167057907 . T . PASS END=167057911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 167057912 . T . PASS END=167057912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:19,0 chr1 167057913 . C . PASS END=167057917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 167057918 . C . PASS END=167057921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:17,0 chr1 167058560 . G . PASS END=167058646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:32:0,87,1292:0,92,255:40,0 chr1 167058647 . A . PASS END=167058648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 167059482 . C . PASS END=167059499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:37,0 chr1 167059500 . A . PASS END=167059524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1274:0,98,255:37,0 chr1 167060023 . C . PASS END=167060023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 167060024 . C . PASS END=167060042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:28:0,83,1047:0,83,255:40,0 chr1 167060043 . A . PASS END=167060079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,141,255:40,0 chr1 167060080 . T C, 233.15 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,35,0:0,27,0:183:271,186,0,2360,186,2360:255,187,0:0,0:2.3315e+02,1.8315e+02,0.0000e+00,4.5000e+02,2.1792e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,30:0,0,33,29 chr1 167060081 . T . PASS END=167060117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,143,255:40,0 chr1 167060118 . A . PASS END=167060174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,114,1710:0,169,255:40,0 chr1 167064087 . A . PASS END=167064087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 167064088 . T . PASS END=167064196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1105:0,80,255:40,0 chr1 167082947 . G . PASS END=167083037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:35:0,83,1260:0,83,255:40,0 chr1 167083038 . G . PASS END=167083041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 167086565 . A . PASS END=167086567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,871:0,81,255:27,0 chr1 167086568 . T . PASS END=167086568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 167086569 . C . PASS END=167086580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 167086581 . G . PASS END=167086581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 167086582 . G . PASS END=167086586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 167086587 . A . PASS END=167086587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 167086588 . G . PASS END=167086604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1116:0,87,255:36,0 chr1 167086605 . A . PASS END=167086605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:34,0 chr1 167086606 . G . PASS END=167086726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1105:0,83,255:40,0 chr1 167086727 . T . PASS END=167086727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:27,0 chr1 167086728 . T . PASS END=167086741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 167086742 . A . PASS END=167086742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 167086743 . G . PASS END=167086752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1072:0,87,255:29,0 chr1 167086753 . A . PASS END=167086756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 167086757 . A . PASS END=167086759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 167086760 . T . PASS END=167086792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,878:0,69,255:26,0 chr1 167086793 . A . PASS END=167086793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 167086794 . G . PASS END=167086796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 167088486 . G . PASS END=167088507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:26,0 chr1 167088508 . A . PASS END=167088511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 167088512 . T . PASS END=167088512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 167088513 . G . PASS END=167088520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:34,0 chr1 167088521 . T . PASS END=167088521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 167088522 . G . PASS END=167088698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:35:0,89,1263:0,89,255:40,0 chr1 167088699 . C . PASS END=167088703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,89,255:25,0 chr1 167095024 . G . PASS END=167095027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,692:0,46,255:19,0 chr1 167095028 . A . PASS END=167095030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 167095031 . C . PASS END=167095031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 167095032 . C . PASS END=167095033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,819:0,72,255:24,0 chr1 167095034 . G . PASS END=167095034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 167095035 . G . PASS END=167095036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 167095037 . C . PASS END=167095037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 167095038 . A . PASS END=167095048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:26,0 chr1 167095049 . G . PASS END=167095052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 167095053 . A . PASS END=167095054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 167095055 . C . PASS END=167095066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 167095067 . A . PASS END=167095068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 167095069 . T . PASS END=167095085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 167095086 . C . PASS END=167095087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 167095088 . G . PASS END=167095105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1117:0,87,255:30,0 chr1 167095106 . G . PASS END=167095106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 167095107 . G . PASS END=167095110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1163:0,80,255:32,0 chr1 167095111 . T . PASS END=167095111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,997:0,65,255:30,0 chr1 167095112 . C . PASS END=167095113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1249:0,89,255:34,0 chr1 167095114 . T . PASS END=167095114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1156:0,58,255:32,0 chr1 167095115 . G . PASS END=167095120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1255:0,89,255:34,0 chr1 167095121 . T . PASS END=167095121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:30,0 chr1 167095122 . T . PASS END=167095125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1240:0,92,255:31,0 chr1 167095126 . T . PASS END=167095148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:32,0 chr1 167095149 . A . PASS END=167095149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:30,0 chr1 167095150 . T . PASS END=167095162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:31,0 chr1 167095163 . G C, 139.84 PASS DP=31;MQ=248.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,20,0:0,11,0:90:178,93,0,1173,93,1173:255,93,0:0,0:1.3984e+02,8.9841e+01,0.0000e+00,4.5000e+02,1.2461e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,17:0,0,13,18 chr1 167095164 . G . PASS END=167095196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1099:0,80,255:32,0 chr1 167095197 . A . PASS END=167095197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:28,0 chr1 167095198 . A . PASS END=167095200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:30,0 chr1 167095201 . T . PASS END=167095221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1082:0,82,255:31,0 chr1 167095222 . A . PASS END=167095224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1020:0,76,255:31,0 chr1 167095225 . A . PASS END=167095225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 167095226 . T . PASS END=167095226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:30,0 chr1 167095227 . G . PASS END=167095227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:30,0 chr1 167095228 . G . PASS END=167095228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:30,0 chr1 167095229 . C . PASS END=167095242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:31,0 chr1 167095243 . C . PASS END=167095291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,71,255:26,0 chr1 167095292 . A . PASS END=167095334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,647:0,47,255:20,0 chr1 167095335 . C . PASS END=167095338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 167095339 . T . PASS END=167095339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 167095340 . G . PASS END=167095340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 167095341 . A . PASS END=167095341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 167095342 . G . PASS END=167095342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 167095343 . T . PASS END=167095343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 167095344 . G . PASS END=167095347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:22,0 chr1 167095348 . C . PASS END=167095355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 167095356 . G . PASS END=167095356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:16,0 chr1 167095357 . G . PASS END=167095378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 167095379 . G . PASS END=167095379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 167095380 . C . PASS END=167095383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 167095384 . T . PASS END=167095384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 167095385 . C . PASS END=167095391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 167095392 . A . PASS END=167095392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr1 167095393 . T . PASS END=167095393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 167095394 . A . PASS END=167095394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 167095395 . G . PASS END=167095400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:16,0 chr1 167095401 . G . PASS END=167095401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr1 167095402 . A . PASS END=167095402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr1 167095403 . G . PASS END=167095405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 167095406 . G . PASS END=167095406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 167095407 . G . PASS END=167095407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 167095408 . A . PASS END=167095408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr1 167095409 . G . PASS END=167095417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 167095418 . G . PASS END=167095418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 167095419 . T . PASS END=167095419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 167095420 . A . PASS END=167095420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,521:0,20,255:15,0 chr1 167095421 . C . PASS END=167095421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:14,0 chr1 167095422 . G . PASS END=167095422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 167095423 . A . PASS END=167095423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 167095424 . G . PASS END=167095424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 167095425 . C . PASS END=167095440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:11:0,30,450:0,33,255:11,0 chr1 167095441 . A . PASS END=167095441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 167095442 . G . PASS END=167095442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 167095443 . G . PASS END=167095444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 167095445 . C . PASS END=167095445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 167095446 . C . PASS END=167095448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 167095449 . C . PASS END=167095449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 167095450 . T . PASS END=167095452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 167095453 . C . PASS END=167095453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 167095454 . A . PASS END=167095455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 167095456 . A . PASS END=167095463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 167095464 . C . PASS END=167095464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:8,0 chr1 167095465 . C . PASS END=167095467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 167095468 . A . PASS END=167095468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 167095469 . G . PASS END=167095474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr1 167095475 . A . PASS END=167095475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 167095476 . G . PASS END=167095494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 167095495 . C . PASS END=167095496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 167095497 . T . PASS END=167095497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 167095498 . C . PASS END=167095515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 167095516 . A . PASS END=167095516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 167095517 . G . PASS END=167095529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 167095530 . G . PASS END=167095541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,621:0,48,255:17,0 chr1 167095542 . A . PASS END=167095542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 167095543 . T . PASS END=167095573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,582:0,40,255:19,0 chr1 167095574 . G . PASS END=167095584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 167095585 . A . PASS END=167095585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 167095586 . A . PASS END=167095590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,840:0,63,255:24,0 chr1 167095591 . A . PASS END=167095591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 167095592 . C . PASS END=167095592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 167095593 . C . PASS END=167095593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,797:0,56,255:22,0 chr1 167095594 . G . PASS END=167095601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 167095602 . G . PASS END=167095602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,836:0,20,255:22,0 chr1 167095603 . G . PASS END=167095604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 167095605 . A . PASS END=167095605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:22,0 chr1 167095606 . G . PASS END=167095606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 167095607 . G . PASS END=167095609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 167095610 . G . PASS END=167095618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,825:0,61,255:26,0 chr1 167095619 . G . PASS END=167095620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 167095621 . A . PASS END=167095621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 167095622 . G . PASS END=167095622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 167095623 . G . PASS END=167095624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,870:0,45,255:26,0 chr1 167095625 . G . PASS END=167095625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 167095626 . G . PASS END=167095627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:26,0 chr1 167095628 . G . PASS END=167095628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,825:0,51,255:25,0 chr1 167095629 . A . PASS END=167095629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167095630 . G . PASS END=167095630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,875:0,56,255:26,0 chr1 167095631 . C . PASS END=167095631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,959:0,32,255:25,0 chr1 167095632 . G . PASS END=167095633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 167095634 . C . PASS END=167095641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 167095642 . C . PASS END=167095643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167095644 . T . PASS END=167095644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 167095645 . C . PASS END=167095655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1058:0,90,255:31,0 chr1 167095656 . C . PASS END=167095656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr1 167095657 . G . PASS END=167095662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:31,0 chr1 167095663 . G . PASS END=167095663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:28,1 chr1 167095664 . C . PASS END=167095678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 167095679 . C . PASS END=167095680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,80,255:25,0 chr1 167095681 . G . PASS END=167095704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:30,0 chr1 167095705 . A . PASS END=167095705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:29,0 chr1 167095706 . C . PASS END=167095716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1141:0,90,255:30,0 chr1 167095717 . T . PASS END=167095727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr1 167095728 . C . PASS END=167095738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr1 167095739 . G . PASS END=167095739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 167095740 . A . PASS END=167095760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 167095761 . A . PASS END=167095761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 167095762 . G . PASS END=167095764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 167095765 . G A, 49.91 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=2.475;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:7,4,0:6,8,0:48:85,0,50,429,465,893:255,0,255:11,0:4.9915e+01,6.6010e-05,5.3000e+01,4.2876e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,8,4:8,5,6,6 chr1 167095766 . C . PASS END=167095779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 167095780 . T . PASS END=167095802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1124:0,84,255:30,0 chr1 167095803 . G . PASS END=167095805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 167095806 . T . PASS END=167095807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 167095808 . G . PASS END=167095843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1255:0,86,255:33,0 chr1 167095844 . C . PASS END=167095848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 167095849 . G . PASS END=167095849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr1 167095850 . G . PASS END=167095877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1227:0,89,255:36,0 chr1 167095878 . G . PASS END=167095878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1101:0,44,255:32,0 chr1 167095879 . C . PASS END=167095880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1242:0,91,255:34,0 chr1 167095881 . G A, 49.81 PASS DP=36;MQ=250.00;MQRankSum=5.102;ReadPosRankSum=4.500;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,17,0:0.472,0.000:36:9,8,0:10,9,0:47:85,0,47,185,185,185:255,0,255:18,0:4.9814e+01,8.8790e-05,5.0000e+01,1.8458e+02,2.1935e+02,1.8759e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,5,10,7:8,11,9,8 chr1 167095882 . C . PASS END=167095890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:36,0 chr1 167095891 . G . PASS END=167095891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr1 167095892 . C . PASS END=167095918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,105,255:36,0 chr1 167095919 . G . PASS END=167095983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:35:0,84,1288:0,84,255:37,0 chr1 167095984 . A . PASS END=167095984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1256:0,59,255:33,0 chr1 167095985 . C . PASS END=167095992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1371:0,95,255:35,0 chr1 167095993 . C . PASS END=167095993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:32,0 chr1 167095994 . T . PASS END=167096020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1355:0,84,255:39,0 chr1 167096021 . A . PASS END=167096021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:37,0 chr1 167096022 . A . PASS END=167096120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1294:0,89,255:38,0 chr1 167096121 . A . PASS END=167096121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 167096122 . G . PASS END=167096126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 167096127 . A . PASS END=167096127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 167096128 . C . PASS END=167096128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167096129 . A . PASS END=167096129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 167096130 . G . PASS END=167096133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167096134 . A . PASS END=167096134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 167096135 . C . PASS END=167096135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 167096136 . C . PASS END=167096136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 167096137 . A . PASS END=167096143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167096144 . G . PASS END=167096144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 167096145 . A . PASS END=167096145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167096146 . A . PASS END=167096146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 167096147 . G . PASS END=167096151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 167096152 . A . PASS END=167096158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 167096159 . G . PASS END=167096160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 167096161 . A . PASS END=167096162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 167096163 . A . PASS END=167096163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 167096164 . A . PASS END=167096165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 167096166 . G . PASS END=167096180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:30,0 chr1 167096181 . A . PASS END=167096189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1086:0,77,255:26,0 chr1 167096190 . G . PASS END=167096191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 167096192 . G . PASS END=167096192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:27,0 chr1 167096193 . G . PASS END=167096194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 167096195 . G . PASS END=167096195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 167096196 . G . PASS END=167096200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 167096201 . C . PASS END=167096207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1108:0,74,255:26,0 chr1 167096208 . G . PASS END=167096208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:24,0 chr1 167096209 . G . PASS END=167096236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,970:0,67,255:25,0 chr1 167096237 . A . PASS END=167096237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 167096238 . C . PASS END=167096238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 167096239 . A . PASS END=167096239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 167096240 . A . PASS END=167096241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 167096242 . G . PASS END=167096242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 167096243 . G . PASS END=167096278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 167096279 . G . PASS END=167096279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 167096280 . G . PASS END=167096350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:21:0,60,837:0,61,255:26,0 chr1 167096351 . G . PASS END=167096357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 167096358 . T . PASS END=167096358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 167096359 . C . PASS END=167096392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1111:0,80,255:32,0 chr1 167096393 . G . PASS END=167096394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 167096395 . C . PASS END=167096404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 167096405 . G . PASS END=167096405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 167096406 . A . PASS END=167096406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 167096407 . G . PASS END=167096408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 167096409 . A . PASS END=167096413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167096414 . G . PASS END=167096427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,77,255:28,0 chr1 167096428 . A . PASS END=167096471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:30,0 chr1 167096472 . A . PASS END=167096476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,76,255:25,0 chr1 167096477 . C . PASS END=167096488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:30,0 chr1 167096489 . G . PASS END=167096489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 167096490 . C . PASS END=167096499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 167096500 . C . PASS END=167096500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 167096501 . A . PASS END=167096506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1057:0,87,255:29,0 chr1 167096507 . G . PASS END=167096517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 167096518 . C . PASS END=167096520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 167096521 . T . PASS END=167096559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,870:0,62,255:26,0 chr1 167096560 . T . PASS END=167096609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,582:0,41,255:19,0 chr1 167096610 . T . PASS END=167096610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:15,0 chr1 167096611 . C . PASS END=167096615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 167096616 . T . PASS END=167096616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 167096617 . C . PASS END=167096617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 167096618 . T . PASS END=167096618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr1 167096619 . G . PASS END=167096623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 167096624 . A . PASS END=167096638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:13,0 chr1 167096639 . A . PASS END=167096639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 167096640 . C . PASS END=167096651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 167096652 . T . PASS END=167096652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 167096653 . G . PASS END=167096670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:13,0 chr1 167096671 . T . PASS END=167096678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 167096679 . C . PASS END=167096689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 167096690 . C . PASS END=167096749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:19,0 chr1 167096750 . C . PASS END=167096767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:26,0 chr1 167096768 . C . PASS END=167096778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1139:0,84,255:31,0 chr1 167096779 . C . PASS END=167096779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 167096780 . A . PASS END=167096790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1156:0,83,255:32,0 chr1 167096791 . C . PASS END=167096791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr1 167096792 . C . PASS END=167097021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1147:0,80,255:40,0 chr1 167097022 . G . PASS END=167097022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:31,0 chr1 167097023 . G . PASS END=167097038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1202:0,83,255:34,0 chr1 167097039 . A . PASS END=167097039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 167097040 . G . PASS END=167097058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,101,255:33,0 chr1 167097059 . A . PASS END=167097059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr1 167097060 . T . PASS END=167097529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:34:0,87,1250:0,88,255:40,1 chr1 167097530 . C . PASS END=167097566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1430:0,105,255:40,0 chr1 167097567 . G A, 49.27 PASS DP=46;MQ=250.00;MQRankSum=5.778;ReadPosRankSum=2.073;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,21,0:0.457,0.000:46:11,10,0:14,11,0:48:84,0,50,695,894,1590:255,0,255:24,0:4.9268e+01,7.3258e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,4,10,11:11,14,7,14 chr1 167097568 . A . PASS END=167097604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,107,1800:0,107,255:40,0 chr1 167097605 . C . PASS END=167097701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:50:0,120,1800:0,137,255:40,0 chr1 167097702 . T . PASS END=167097702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:74:63:0,74,1638:0,74,255:40,0 chr1 167097703 . T . PASS END=167097738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:93:48:0,93,1800:0,93,255:40,0 chr1 167097739 . C A, 194.46 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,17,0:0,32,0:144:232,147,0,1865,147,1865:255,150,0:0,0:1.9446e+02,1.4446e+02,0.0000e+00,4.5000e+02,1.7923e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,24:0,0,25,24 chr1 167097740 . T . PASS END=167097776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,103,1650:0,103,255:40,0 chr1 167097777 . A . PASS END=167097838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,100,1360:0,100,255:40,0 chr1 167097839 . G . PASS END=167097839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1046:0,53,255:33,0 chr1 167097840 . G . PASS END=167097840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:17:40:0,17,1045:0,17,255:33,0 chr1 167097841 . A . PASS END=167097845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1198:0,81,255:36,0 chr1 167190135 . A . PASS END=167190177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:35:0,80,1219:0,80,255:39,0 chr1 167190178 . C . PASS END=167190178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1148:0,50,255:31,0 chr1 167190179 . G . PASS END=167190195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1247:0,86,255:33,0 chr1 167272711 . A . PASS END=167272811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:69:0,120,1800:0,152,255:40,1 chr1 167298516 . A . PASS END=167298543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,165,255:40,0 chr1 167301707 . A . PASS END=167301772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:50:0,117,1751:0,117,255:40,0 chr1 167307444 . A . PASS END=167307462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr1 167307463 . T . PASS END=167307463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 167307464 . C . PASS END=167307465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 167307466 . T . PASS END=167307485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,914:0,65,255:26,0 chr1 167307486 . T . PASS END=167307487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 167307488 . A . PASS END=167307495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,900:0,72,255:24,0 chr1 167334704 . G . PASS END=167334708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:26,0 chr1 167334709 . C . PASS END=167334711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr1 167334712 . A . PASS END=167334712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:27,0 chr1 167334713 . C . PASS END=167334766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 167334767 . C . PASS END=167334800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:25,0 chr1 167334801 . T . PASS END=167334804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,751:0,50,255:18,0 chr1 167339398 . G . PASS END=167339451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,132,255:40,0 chr1 167341154 . T . PASS END=167341273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:37:0,93,1395:0,94,255:40,0 chr1 167343345 . C . PASS END=167343345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 167343346 . T . PASS END=167343349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:22,0 chr1 167343350 . T . PASS END=167343350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 167343351 . T . PASS END=167343354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr1 167343355 . C . PASS END=167343355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:21,0 chr1 167343356 . G . PASS END=167343358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 167343359 . T . PASS END=167343359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 167343360 . G . PASS END=167343370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:22:0,62,945:0,62,255:26,0 chr1 167343371 . G . PASS END=167343373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1035:0,84,255:29,0 chr1 167343374 . A . PASS END=167343374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:28,0 chr1 167343375 . C . PASS END=167343375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 167343376 . T . PASS END=167343381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1094:0,90,255:31,0 chr1 167343382 . A . PASS END=167343382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 167343383 . G . PASS END=167343386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 167343387 . G . PASS END=167343387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 167343388 . C . PASS END=167343507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1149:0,80,255:35,0 chr1 167343508 . T . PASS END=167343508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:26,0 chr1 167343509 . G . PASS END=167343533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 167345266 . G . PASS END=167345266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 167345267 . A . PASS END=167345284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,62,255:25,0 chr1 167345285 . A . PASS END=167345294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 167345295 . G . PASS END=167345295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 167345296 . C . PASS END=167345300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:32,0 chr1 167345301 . T . PASS END=167345301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,932:0,49,255:30,0 chr1 167345302 . C . PASS END=167345316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1216:0,81,255:37,0 chr1 167345317 . T . PASS END=167345317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:17:39:0,17,897:0,17,255:31,0 chr1 167345318 . T . PASS END=167345358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1227:0,81,255:37,0 chr1 167345359 . T . PASS END=167345359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:73:35:0,73,988:0,73,255:31,0 chr1 167345360 . T . PASS END=167345378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:33,0 chr1 167345379 . C . PASS END=167345384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr1 167345385 . C . PASS END=167345388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167345389 . C . PASS END=167345392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,878:0,64,255:26,0 chr1 167353094 . G . PASS END=167353188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,99,1485:0,131,255:40,0 chr1 167358825 . C . PASS END=167358998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:38:0,84,1260:0,97,255:40,0 chr1 167365523 . G . PASS END=167365664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,140,255:40,0 chr1 167365770 . A . PASS END=167365777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:79:0,120,1800:0,202,255:40,0 chr1 167367231 . A . PASS END=167367349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1215:0,80,255:40,0 chr1 167367350 . T . PASS END=167367355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1016:0,71,255:24,0 chr1 167367356 . A . PASS END=167367356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:23,0 chr1 167367357 . A . PASS END=167367362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:22,0 chr1 167367363 . T . PASS END=167367363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,689:0,55,255:19,0 chr1 167367364 . C . PASS END=167367366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 167367367 . G . PASS END=167367370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:17,0 chr1 167368423 . A . PASS END=167368423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 167368424 . A . PASS END=167368424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:28,0 chr1 167368425 . T . PASS END=167368592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1134:0,89,255:40,0 chr1 167368593 . A . PASS END=167368602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:70:29:0,70,994:0,70,255:26,0 chr1 167370688 . G . PASS END=167370696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr1 167370697 . A . PASS END=167370699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,992:0,81,255:31,0 chr1 167370700 . C . PASS END=167370700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 167370701 . C . PASS END=167370751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1133:0,86,255:35,0 chr1 167370752 . T . PASS END=167370781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,778:0,66,255:25,0 chr1 167370782 . T . PASS END=167370782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 167370783 . T . PASS END=167370788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 167370789 . T . PASS END=167370789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 167370790 . A . PASS END=167370791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 167370792 . A . PASS END=167370792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 167370793 . G . PASS END=167370793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 167381196 . G . PASS END=167381199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,765:0,47,255:24,0 chr1 167381200 . T . PASS END=167381205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:26,0 chr1 167381206 . C . PASS END=167381206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 167381207 . A . PASS END=167381213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,933:0,65,255:26,0 chr1 167381214 . C . PASS END=167381214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 167381215 . C . PASS END=167381215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 167381216 . A . PASS END=167381218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 167381219 . A . PASS END=167381219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,963:0,21,255:27,0 chr1 167381220 . A . PASS END=167381227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:30,0 chr1 167381228 . A . PASS END=167381228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 167381229 . C . PASS END=167381391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1111:0,82,255:40,1 chr1 167381392 . G . PASS END=167381406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:25:0,72,1080:0,75,255:26,0 chr1 167381407 . A . PASS END=167381407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 167381408 . T . PASS END=167381426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,862:0,72,255:25,0 chr1 167381427 . C . PASS END=167381427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr1 167381428 . A . PASS END=167381433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 167381434 . T . PASS END=167381434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 167381435 . G . PASS END=167381445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr1 167381446 . A . PASS END=167381446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 167381447 . G . PASS END=167381464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 167381465 . A . PASS END=167381471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 167381472 . G . PASS END=167381472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 167381473 . T . PASS END=167381473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:19,0 chr1 167381474 . C . PASS END=167381474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 167381475 . T . PASS END=167381505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:19,0 chr1 167381506 . C . PASS END=167381508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 167381509 . A . PASS END=167381512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 167381513 . C . PASS END=167381514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 167381515 . G . PASS END=167381515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 167381516 . A . PASS END=167381518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 167381519 . G . PASS END=167381519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 167381520 . C . PASS END=167381520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 167381521 . A . PASS END=167381539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:18,0 chr1 167381540 . G . PASS END=167381541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 167382263 . A . PASS END=167382275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:33:0,93,1349:0,95,255:36,0 chr1 167382276 . A . PASS END=167382276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 167382277 . G . PASS END=167382336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:40:0,84,1393:0,84,255:40,0 chr1 167382337 . T . PASS END=167382351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:35,0 chr1 167384737 . C . PASS END=167384778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,768:0,62,255:26,0 chr1 167384779 . C . PASS END=167384908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1149:0,80,255:39,0 chr1 167384909 . A . PASS END=167384909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 167384910 . T . PASS END=167384924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 167384925 . G . PASS END=167384927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 167384928 . C . PASS END=167384945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:29,0 chr1 167384946 . G . PASS END=167384948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 167384949 . A . PASS END=167384956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 167384957 . C . PASS END=167384969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 167384970 . A . PASS END=167384978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 167384979 . T . PASS END=167384980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 167384981 . T . PASS END=167384981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,817:0,48,255:23,0 chr1 167384982 . C . PASS END=167384992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,937:0,65,255:25,0 chr1 167384993 . G . PASS END=167384993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 167384994 . G . PASS END=167385009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 167385010 . C . PASS END=167385010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 167385011 . T . PASS END=167385015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,1 chr1 167385016 . C . PASS END=167385018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:34:23:0,34,810:0,34,255:20,1 chr1 167385019 . C . PASS END=167385023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 167385024 . A . PASS END=167385026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 167385027 . A . PASS END=167385027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:19,0 chr1 167385028 . C . PASS END=167385029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 167385030 . G . PASS END=167385030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:18,0 chr1 167385031 . C . PASS END=167385047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:19:0,42,630:0,43,255:19,0 chr1 167385286 . G . PASS END=167385302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:60:0,84,1260:0,113,255:40,0 chr1 167385303 . G . PASS END=167385306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:63:60:0,63,945:0,130,255:24,0 chr1 167385307 . A . PASS END=167385311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:42:60:0,42,630:0,130,255:17,0 chr1 167385312 . C . PASS END=167385315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:30:56:0,30,450:0,57,255:12,0 chr1 167385316 . C . PASS END=167385316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:27:56:0,27,405:0,151,255:9,0 chr1 167385317 . C . PASS END=167385322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:12:54:0,12,180:0,117,255:5,1 chr1 167385323 . T . PASS END=167385323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:9:54:0,9,135:0,162,255:3,0 chr1 167385324 . TAAA TAA,TA,T, 82.28 PASS DP=53;MQ=247.05;MQRankSum=4.197;ReadPosRankSum=-0.329;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:12,28,8,5,0:0.528,0.151,0.094,0.000:53:9,12,3,3,0:3,16,5,2,0:23:90,35,0,88,22,74,153,56,202,108,302,302,302,302,302:255,0,255:2,64:8.2280e+01,3.2280e+01,2.0022e-02,8.4515e+01,2.3972e+01,7.3972e+01,1.5009e+02,5.8299e+01,2.0436e+02,1.0830e+02,3.2913e+02,3.3413e+02,3.3413e+02,3.3413e+02,3.3214e+02:0.00,5.00,8.01,5.00,10.00,8.01,5.00,10.00,10.00,8.01,34.77,39.77,39.77,39.77,37.78:9,3,19,22:8,4,26,15 chr1 167385325 . A . LowGQ END=167385326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:15,65:80:0:62:0,0,0:255,0,255:14,62 chr1 167400918 . T . PASS END=167400920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 167400921 . G . PASS END=167400921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 167400922 . C . PASS END=167400928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:38,0 chr1 167400929 . G . PASS END=167400929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr1 167400930 . C . PASS END=167400983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,93,255:40,0 chr1 167402261 . C . PASS END=167402267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 167402268 . A . PASS END=167402268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,934:0,48,255:27,0 chr1 167402269 . G . PASS END=167402275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 167402276 . G . PASS END=167402276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 167402277 . T . PASS END=167402282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:28,0 chr1 167402283 . T . PASS END=167402283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:27,0 chr1 167402284 . T . PASS END=167402294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 167402295 . C . PASS END=167402295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 167402296 . G . PASS END=167402296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167403257 . C . PASS END=167403264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:34,0 chr1 167403265 . T . PASS END=167403265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 167403266 . C . PASS END=167403287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1243:0,91,255:35,0 chr1 167403288 . T . PASS END=167403289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 167403290 . C . PASS END=167403290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 167403291 . G . PASS END=167403292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:28,0 chr1 167403293 . C . PASS END=167403295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 167403296 . C . PASS END=167403296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 167403297 . T . PASS END=167403298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 167403299 . A . PASS END=167403300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,931:0,43,255:27,0 chr1 167403301 . C . PASS END=167403305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 167403306 . T . PASS END=167403306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 167403307 . G . PASS END=167403311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 167403312 . T . PASS END=167403312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,925:0,57,255:26,0 chr1 167403313 . C . PASS END=167403313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 167403319 . G . PASS END=167403319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 167404636 . A . PASS END=167404671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,120,1800:0,128,255:40,0 chr1 167407804 . T . PASS END=167407804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 167407807 . C . PASS END=167407819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,128,255:40,0 chr1 167407820 . A . PASS END=167407887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:87:43:0,87,1305:0,95,255:40,0 chr1 167408581 . G . PASS END=167408632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,111,1501:0,111,255:40,0 chr1 167408633 . C . PASS END=167408637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,105,1667:0,105,255:40,0 chr1 167409893 . G . PASS END=167409893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 167409895 . A . PASS END=167409895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 167409901 . C . PASS END=167410004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,99,1457:0,104,255:40,0 chr1 167417580 . C . PASS END=167417661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1186:0,86,255:40,0 chr1 167463201 . C . PASS END=167463211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,698:0,44,255:19,0 chr1 167463212 . C . PASS END=167463251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:23,0 chr1 167463252 . T . PASS END=167463272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:15:0,40,590:0,40,255:19,0 chr1 167463273 . T . PASS END=167463274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 167463275 . G . PASS END=167463275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 167463276 . G . PASS END=167463280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 167463281 . G . PASS END=167463293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:10:0,24,360:0,30,255:9,0 chr1 167487637 . G . PASS END=167487637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 167487645 . C . PASS END=167487661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:23,0 chr1 167487662 . G . PASS END=167487668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 167487669 . G . PASS END=167487679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 167487680 . G . PASS END=167487702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,676:0,57,255:19,0 chr1 167502526 . T . PASS END=167502528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 167502529 . C . PASS END=167502541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr1 167502542 . T . PASS END=167502542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 167502543 . T . PASS END=167502543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1017:0,87,255:29,0 chr1 167502544 . T . PASS END=167502544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 167502545 . G . PASS END=167502549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 167502550 . A . PASS END=167502551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,927:0,70,255:28,0 chr1 167502552 . T . PASS END=167502593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:29:0,84,1033:0,86,255:33,0 chr1 167502594 . G . PASS END=167502594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 167502595 . A . PASS END=167502600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 167502601 . C . PASS END=167502626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 167502627 . T . PASS END=167502627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 167502628 . C . PASS END=167502630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 167502631 . C . PASS END=167502631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 167502632 . C . PASS END=167502634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 167511535 . T . PASS END=167511538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:80:0,120,1800:0,210,255:40,0 chr1 167515338 . T . PASS END=167515383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1294:0,81,255:39,0 chr1 167515384 . C . PASS END=167515384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr1 167515385 . A . PASS END=167515492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:33:0,81,1215:0,92,255:40,0 chr1 167515493 . C . PASS END=167515522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,831:0,62,255:26,0 chr1 167517239 . C . PASS END=167517339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:36:0,81,1215:0,92,255:40,0 chr1 167517340 . G . PASS END=167517358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:26,0 chr1 167522625 . C . PASS END=167522625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 167522626 . T . PASS END=167522626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 167522627 . G . PASS END=167522637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 167522638 . A . PASS END=167522640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 167522641 . G . PASS END=167522641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 167522642 . A . PASS END=167522643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 167522644 . A . PASS END=167522644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 167522645 . G . PASS END=167522645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 167522646 . C . PASS END=167522647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 167522648 . G . PASS END=167522648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 167522649 . C . PASS END=167522649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 167522650 . A . PASS END=167522650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 167522651 . G . PASS END=167522655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 167522656 . C . PASS END=167522656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 167522657 . T . PASS END=167522659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 167522660 . G . PASS END=167522660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 167522661 . G . PASS END=167522668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 167522669 . A . PASS END=167522669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 167522670 . G . PASS END=167522676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 167522677 . C . PASS END=167522678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 167522679 . G . PASS END=167522688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 167522689 . C . PASS END=167522689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 167522690 . C . PASS END=167522694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 167522695 . G . PASS END=167522695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 167522696 . G . PASS END=167522712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 167522713 . A . PASS END=167522713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:12,0 chr1 167522714 . G . PASS END=167522720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 167522721 . G . PASS END=167522721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 167522722 . G . PASS END=167522723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 167522724 . G . PASS END=167522727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 167522728 . G . PASS END=167522728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 167522729 . G . PASS END=167522729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 167522730 . C . PASS END=167522797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,612:0,44,255:19,0 chr1 167522798 . A . PASS END=167522823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr1 167522824 . C . PASS END=167522834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:9,0 chr1 167522835 . C . PASS END=167522835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 167522836 . G . PASS END=167522840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:8,0 chr1 167522841 . C . PASS END=167522841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 167522842 . A . PASS END=167522847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 167522848 . G . PASS END=167522882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,188:6,0 chr1 167522883 . G . PASS END=167522923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 167522924 . A . PASS END=167522924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 167522925 . C . PASS END=167522932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 167522933 . G . PASS END=167522933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 167522934 . G . PASS END=167522935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 167522936 . C . PASS END=167522940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 167522941 . A . PASS END=167522941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 167522942 . G . PASS END=167522978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 167599661 . A . PASS END=167599666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 167653137 . G . PASS END=167653146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr1 167653147 . C . PASS END=167653148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 167653149 . G . PASS END=167653159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,680:0,44,255:19,0 chr1 167653160 . C . PASS END=167653161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 167653162 . A . PASS END=167653162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 167653163 . T . PASS END=167653220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,902:0,72,255:25,0 chr1 167653221 . G . PASS END=167653221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 167653222 . C . PASS END=167653233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 167653234 . A . PASS END=167653238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,807:0,55,255:19,0 chr1 167654658 . A . PASS END=167654671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,807:0,63,255:23,0 chr1 167654672 . A . PASS END=167654672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 167654673 . C . PASS END=167654674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 167654675 . A . PASS END=167654675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:21,0 chr1 167654676 . A . PASS END=167654686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 167654687 . A . PASS END=167654694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,836:0,53,255:20,0 chr1 167654695 . G . PASS END=167654699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 167654700 . C . PASS END=167654703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 167654704 . C . PASS END=167654707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 167654708 . G . PASS END=167654708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:19,0 chr1 167654709 . T . PASS END=167654728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,603:0,60,255:20,0 chr1 167654729 . G . PASS END=167654729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 167654730 . G . PASS END=167654733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 167654734 . A . PASS END=167654747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,652:0,43,255:19,0 chr1 167659286 . A . PASS END=167659357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:35:0,90,1288:0,90,255:40,0 chr1 167663336 . G . PASS END=167663348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,491:0,42,255:15,0 chr1 167663349 . T . PASS END=167663349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 167663350 . T . PASS END=167663368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:19,0 chr1 167663369 . C . PASS END=167663377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 167663378 . T . PASS END=167663378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 167663379 . C . PASS END=167663381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 167663382 . C . PASS END=167663382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 167663383 . C . PASS END=167663398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 167663399 . A . PASS END=167663399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 167663400 . A . PASS END=167663406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 167663407 . G . PASS END=167663407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 167663408 . G . PASS END=167663409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 167663410 . G . PASS END=167663416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 167663417 . T . PASS END=167663417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 167663418 . T . PASS END=167663418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 167663419 . T . PASS END=167663427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 167663428 . A . PASS END=167663429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 167663430 . C . PASS END=167663431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 167663432 . T . PASS END=167663432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 167663433 . C . PASS END=167663434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 167663435 . A . PASS END=167663448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 167663449 . T . PASS END=167663450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 167663451 . G . PASS END=167663477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,630:0,41,255:18,0 chr1 167663478 . A . PASS END=167663513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 167663514 . G . LowGQ END=167663514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:10,0 chr1 167663515 . C . PASS END=167663516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 167663517 . G . PASS END=167663521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 167663522 . C . LowGQ END=167663522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:7,0 chr1 167663523 . T . PASS END=167663526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:8,0 chr1 167663527 . C . PASS END=167663539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,233:6,0 chr1 167666336 . G . PASS END=167666340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 167666341 . G . PASS END=167666341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 167666342 . A . PASS END=167666342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 167666343 . C . PASS END=167666347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 167666348 . G . PASS END=167666348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 167666349 . G . PASS END=167666351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr1 167666352 . C . PASS END=167666352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 167666353 . A . PASS END=167666365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:26,0 chr1 167666366 . C . PASS END=167666719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,988:0,81,255:40,0 chr1 167666720 . A . PASS END=167666720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1172:0,61,255:29,0 chr1 167666721 . C . PASS END=167666746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1095:0,82,255:33,0 chr1 167666747 . T . PASS END=167666747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1201:0,64,255:31,0 chr1 167666748 . G . PASS END=167666784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr1 167666785 . A . PASS END=167666785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 167666786 . G . PASS END=167666787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 167666788 . A . PASS END=167666788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 167666789 . G . PASS END=167666793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1127:0,96,255:32,0 chr1 167666794 . G . PASS END=167666794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:30,0 chr1 167666795 . G . PASS END=167666798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1194:0,96,255:32,0 chr1 167666799 . A . PASS END=167666799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:30,0 chr1 167666800 . G . PASS END=167666805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1154:0,83,255:32,0 chr1 167666806 . A . PASS END=167666806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1031:0,27,255:28,0 chr1 167666807 . G . PASS END=167666820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1266:0,94,255:35,0 chr1 167666821 . G . PASS END=167666821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1216:0,61,255:32,0 chr1 167666822 . A . PASS END=167666823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1296:0,94,255:35,0 chr1 167666824 . G . PASS END=167666825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:30:37:0,30,1011:0,30,255:30,0 chr1 167666826 . T . PASS END=167666842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1205:0,91,255:34,0 chr1 167666843 . G . PASS END=167666843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1120:0,78,255:33,0 chr1 167666844 . G . PASS END=167666887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1213:0,91,255:38,0 chr1 167666888 . G . PASS END=167666888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,975:0,68,255:31,0 chr1 167666889 . C . PASS END=167666897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:34,0 chr1 167666898 . A . PASS END=167666898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:27,0 chr1 167666899 . G . PASS END=167666900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 167666901 . A . PASS END=167666903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 167666904 . C . PASS END=167666920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 167666921 . G . PASS END=167666926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 167666927 . G . PASS END=167666927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 167666928 . T . PASS END=167666942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1023:0,74,255:26,0 chr1 167666943 . T . PASS END=167666947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167666948 . A . PASS END=167666948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 167666949 . A . PASS END=167666955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 167666956 . A . PASS END=167666956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:23,0 chr1 167666957 . A . PASS END=167666967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 167666968 . A . PASS END=167666968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:24,0 chr1 167666969 . A . PASS END=167667032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:21:0,61,792:0,61,255:26,0 chr1 167667033 . A . PASS END=167667033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 167667034 . G . PASS END=167667042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 167667043 . T . PASS END=167667061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:16:0,48,620:0,48,255:18,0 chr1 167667062 . G . PASS END=167667062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr1 167667063 . C . PASS END=167667073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:16,0 chr1 167667074 . C . PASS END=167667078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:15:0,34,540:0,34,255:14,0 chr1 167667079 . G . PASS END=167667079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 167673901 . G . PASS END=167673906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:34:0,89,1241:0,89,255:32,0 chr1 167673907 . A . PASS END=167673908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,1 chr1 167673909 . T . PASS END=167673933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1363:0,95,255:37,0 chr1 167691389 . A . PASS END=167691443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 167691444 . G . PASS END=167691464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 167691465 . C . PASS END=167691479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 167734807 . C . PASS END=167734808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 167734809 . T . PASS END=167734809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:23,0 chr1 167734810 . T . PASS END=167734812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 167734813 . T . PASS END=167734813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 167734814 . C . PASS END=167734818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:26,0 chr1 167734819 . G . PASS END=167734819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 167734820 . T . PASS END=167734820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 167734821 . G . PASS END=167734840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,889:0,80,255:35,0 chr1 167734841 . T . PASS END=167734841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1281:0,75,255:35,0 chr1 167734842 . G . PASS END=167734973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:36:0,93,1393:0,98,255:40,0 chr1 167734974 . C . PASS END=167734986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:26:0,72,1080:0,78,255:26,0 chr1 167741512 . T . PASS END=167741705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1215:0,85,255:40,0 chr1 167741706 . G . PASS END=167741706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:26,0 chr1 167741707 . C . PASS END=167741725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1000:0,68,255:26,0 chr1 167742473 . A . PASS END=167742605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:34:0,91,1243:0,91,255:40,0 chr1 167745301 . C . PASS END=167745403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:37:0,110,1412:0,110,255:40,0 chr1 167757057 . G . PASS END=167757081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:40:0,103,1435:0,103,255:40,0 chr1 167757082 . A . PASS END=167757082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1755:0,71,255:40,0 chr1 167757083 . C . PASS END=167757158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:39:0,85,1338:0,85,255:40,0 chr1 167778915 . T . PASS END=167779073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:34:0,84,1260:0,86,255:40,0 chr1 167779074 . T . PASS END=167779076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 167779962 . T . PASS END=167779979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,909:0,78,255:26,0 chr1 167779980 . G . PASS END=167779985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 167779986 . C . PASS END=167779987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 167779988 . C . PASS END=167780111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:31:0,86,1249:0,86,255:40,0 chr1 167780112 . A . PASS END=167780112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:27,0 chr1 167780113 . G . PASS END=167780121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:33:0,84,1225:0,86,255:31,0 chr1 167780122 . G . PASS END=167780122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 167780123 . T . PASS END=167780128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 167780129 . G . PASS END=167780131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 167780132 . C . PASS END=167780136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 167780137 . A . PASS END=167780137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 167780138 . G . PASS END=167780138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 167780139 . A . PASS END=167780140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 167780141 . T . PASS END=167780144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 167780145 . C . PASS END=167780150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 167787310 . C . PASS END=167787505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:31:0,89,1157:0,89,255:40,0 chr1 167791262 . C . PASS END=167791379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:40:0,114,1710:0,120,255:40,0 chr1 167792246 . C . PASS END=167792361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,99,1485:0,117,255:40,0 chr1 167793714 . C . PASS END=167793810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:41:0,100,1460:0,100,255:40,0 chr1 167793889 . C . PASS END=167793920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1148:0,85,255:36,0 chr1 167793921 . A . PASS END=167793921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:35,0 chr1 167793922 . T . PASS END=167793935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1325:0,95,255:36,0 chr1 167793936 . A . PASS END=167793936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1223:0,64,255:33,0 chr1 167793937 . C . PASS END=167793998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1485:0,93,255:40,0 chr1 167793999 . A . PASS END=167793999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1346:0,73,255:37,0 chr1 167794000 . T . PASS END=167794048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1219:0,81,255:39,0 chr1 167794049 . A . PASS END=167794049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:27,0 chr1 167794050 . G . PASS END=167794051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 167794052 . C . PASS END=167794052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 167794053 . A . PASS END=167794053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 167794054 . G . PASS END=167794080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 167794081 . A . PASS END=167794093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:48:21:0,48,720:0,59,255:19,0 chr1 167798505 . C . PASS END=167798519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,653:0,43,255:19,0 chr1 167798520 . A . PASS END=167798520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,646:0,24,255:19,0 chr1 167798521 . G . PASS END=167798527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,799:0,63,255:23,0 chr1 167798528 . G . PASS END=167798661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1019:0,81,255:40,0 chr1 167802225 . C . PASS END=167802396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:35:0,92,1284:0,92,255:40,0 chr1 167802397 . A . PASS END=167802400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,83,255:24,0 chr1 167803208 . C . PASS END=167803315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,110,1573:0,110,255:40,0 chr1 167803880 . T . PASS END=167803895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,157,255:40,0 chr1 167803896 . T A, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.743;ReadPosRankSum=5.118;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,36,0:0.571,0.000:63:10,24,0:17,12,0:48:85,0,48,1217,947,2163:255,0,255:27,0:5.0000e+01,7.5070e-05,5.1358e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,10,21,15:16,11,23,13 chr1 167803897 . A . PASS END=167803932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,153,255:40,0 chr1 167805547 . C . PASS END=167805555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 167805556 . A . PASS END=167805558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 167805559 . A . PASS END=167805559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:27,0 chr1 167805560 . C . PASS END=167805571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,807:0,80,255:34,0 chr1 167805572 . T . PASS END=167805572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:32,0 chr1 167805573 . A . PASS END=167805578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1219:0,88,255:36,0 chr1 167805579 . A . PASS END=167805579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:35,0 chr1 167805580 . T . PASS END=167805778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:36:0,80,1252:0,80,255:40,0 chr1 167806487 . C . PASS END=167806556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:70:0,120,1800:0,167,255:40,0 chr1 167814801 . T . PASS END=167814814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:21,0 chr1 167814815 . G . PASS END=167814824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:25,0 chr1 167814825 . T . PASS END=167814825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:24,0 chr1 167814826 . C . PASS END=167814843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,930:0,62,255:26,0 chr1 167814844 . G . PASS END=167814844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 167814845 . T . PASS END=167814845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 167814846 . C . PASS END=167814867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1072:0,90,255:30,0 chr1 167814868 . C . PASS END=167814868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 167814869 . A . PASS END=167814870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 167814871 . T . PASS END=167814871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 167814872 . G . PASS END=167815069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1156:0,83,255:40,0 chr1 167815070 . A . PASS END=167815070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1398:0,54,255:36,0 chr1 167815071 . G . PASS END=167815078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1413:0,81,255:37,0 chr1 167815079 . T . PASS END=167815079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1275:0,78,255:32,0 chr1 167815080 . C . PASS END=167815080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:31,0 chr1 167815081 . T . PASS END=167815082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:31,0 chr1 167815083 . C . PASS END=167815083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:31,0 chr1 167815084 . A . PASS END=167815088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:34:0,69,1080:0,69,255:31,0 chr1 167815089 . G . PASS END=167815091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,88,255:27,0 chr1 167815223 . C . PASS END=167815226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:26,0 chr1 167815227 . C . PASS END=167815227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:24,0 chr1 167815228 . C . PASS END=167815256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,856:0,61,255:26,0 chr1 167815257 . A . PASS END=167815296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:38,2 chr1 167815297 . T . PASS END=167815297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1490:0,60,255:37,2 chr1 167815298 . T . PASS END=167815313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:42:0,87,1361:0,87,255:40,0 chr1 167815314 . A . PASS END=167815314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1452:0,77,255:40,0 chr1 167815315 . T . PASS END=167815367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,108,1421:0,108,255:40,0 chr1 167815368 . C . PASS END=167815368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1375:0,74,255:40,0 chr1 167815369 . A . PASS END=167815443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1305:0,95,255:40,0 chr1 167815444 . C . PASS END=167815449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,76,255:26,0 chr1 167815450 . A . PASS END=167815451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 167815452 . C . PASS END=167815472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:26,0 chr1 167815473 . C . PASS END=167815473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 167815474 . A . PASS END=167815476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 167815477 . C . PASS END=167815477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 167815478 . T . PASS END=167815479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:23:0,56,851:0,56,255:19,0 chr1 167815480 . T . PASS END=167815480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 167815481 . C . PASS END=167815501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:18,0 chr1 167817599 . C . PASS END=167817601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 167817602 . T . PASS END=167817638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,109,1800:0,109,255:40,0 chr1 167817639 . A G, 225.74 PASS DP=60;MQ=249.47;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,26,0:0,34,0:176:264,179,0,2193,179,2193:255,180,0:0,0:2.2574e+02,1.7574e+02,0.0000e+00,4.5000e+02,2.1051e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,31:0,0,35,25 chr1 167817640 . C . PASS END=167817676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,167,255:40,0 chr1 167817677 . C . PASS END=167817725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:87:48:0,87,1305:0,128,255:40,0 chr1 167817726 . C . PASS END=167817727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:78:49:0,78,1170:0,147,255:26,0 chr1 167823591 . T . PASS END=167823711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,120,1800:0,123,255:40,0 chr1 167823712 . T . PASS END=167823712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1566:0,72,255:38,0 chr1 167823713 . C . PASS END=167823720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:45:0,90,1350:0,96,255:39,0 chr1 167823721 . C . PASS END=167823727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:69:37:0,69,1035:0,72,255:24,0 chr1 167825403 . G . PASS END=167825411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1125:0,90,255:34,0 chr1 167825412 . T . PASS END=167825412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1164:0,71,255:33,0 chr1 167825413 . C . PASS END=167825447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:85:34:0,85,1156:0,85,255:40,0 chr1 167825448 . A . PASS END=167825448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1429:0,57,255:40,0 chr1 167825449 . T . PASS END=167825484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,103,1490:0,103,255:40,0 chr1 167825485 . T C, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=1.838;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,23,0:0.535,0.000:43:13,13,0:7,10,0:48:85,0,50,822,715,1538:255,0,255:18,0:5.0000e+01,6.7304e-05,5.2587e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,7,15,8:16,4,13,10 chr1 167825486 . G . PASS END=167825522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1380:0,98,255:40,0 chr1 167825523 . C . PASS END=167825568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:42:0,98,1448:0,98,255:40,0 chr1 167825569 . T . PASS END=167825605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,111,1552:0,116,255:40,0 chr1 167825606 . A G, 50.00 PASS DP=51;MQ=250.00;MQRankSum=5.931;ReadPosRankSum=0.842;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,30,0:0.600,0.000:50:13,13,0:7,17,0:47:85,0,47,1015,679,1694:255,0,255:19,0:5.0000e+01,9.0602e-05,4.9633e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,14,16:12,8,15,15 chr1 167825607 . A . PASS END=167825631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,125,255:40,0 chr1 167825632 . A . PASS END=167825632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1408:0,77,255:40,0 chr1 167825633 . C . PASS END=167825639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr1 167825640 . T . PASS END=167825640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1543:0,74,255:40,0 chr1 167825641 . C . PASS END=167825643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 167825644 . C . PASS END=167825666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:38:0,90,1395:0,90,255:40,0 chr1 167825667 . T . PASS END=167825667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1069:0,74,255:29,0 chr1 167825668 . C . PASS END=167825674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1164:0,85,255:31,0 chr1 167825675 . T . PASS END=167825675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:29,0 chr1 167825676 . A . PASS END=167825676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:29,0 chr1 167825677 . T . PASS END=167825677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr1 167829045 . C . PASS END=167829131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,117,1755:0,135,255:40,0 chr1 167830109 . C . PASS END=167830295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:33:0,81,1215:0,83,255:40,0 chr1 167830296 . A . PASS END=167830301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 167839495 . C . PASS END=167839648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:30:0,81,1215:0,90,255:40,0 chr1 167844369 . C . PASS END=167844424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,180,255:40,0 chr1 167847684 . A . PASS END=167847686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,653:0,43,255:19,0 chr1 167847687 . T . PASS END=167847698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:25,0 chr1 167847699 . C . PASS END=167847704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1028:0,87,255:30,0 chr1 167847705 . T . PASS END=167847705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 167847706 . A . PASS END=167847871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1151:0,85,255:40,0 chr1 167847872 . G . PASS END=167847873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:26,0 chr1 167849353 . C . PASS END=167849368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,120,1800:0,125,255:40,0 chr1 167849369 . C . PASS END=167849374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,147,255:40,0 chr1 167849375 . G . PASS END=167849413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,115,1800:0,115,255:40,0 chr1 167849414 . A G, 49.11 PASS DP=48;MQ=250.00;MQRankSum=5.831;ReadPosRankSum=4.312;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,21,0:0.447,0.000:47:14,14,0:12,7,0:48:84,0,50,751,893,1644:255,0,255:25,0:4.9110e+01,7.5070e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,11,14,7:13,13,13,8 chr1 167849415 . C . PASS END=167849429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:94:46:0,94,1580:0,94,255:40,0 chr1 167849723 . A . PASS END=167849723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 167849729 . T . PASS END=167849847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:38:0,108,1535:0,113,255:40,0 chr1 167852675 . C . PASS END=167852705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1185:0,83,255:39,0 chr1 167852706 . C . PASS END=167852706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 167852707 . C . PASS END=167852715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1300:0,117,255:39,0 chr1 167852716 . T . PASS END=167852716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr1 167852717 . C . PASS END=167852862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:37:0,92,1103:0,92,255:40,0 chr1 167852863 . C . PASS END=167852863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 167852864 . A . PASS END=167852866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1211:0,91,255:33,0 chr1 167863091 . C . PASS END=167863096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr1 167863097 . C . PASS END=167863097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 167863098 . A . PASS END=167863098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 167863099 . A . PASS END=167863099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 167863100 . A . PASS END=167863109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr1 167863110 . A . PASS END=167863179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,956:0,81,255:38,0 chr1 167865833 . T . PASS END=167865833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,221,255:40,0 chr1 167865834 . T . PASS END=167865870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,2:94:99:78:0,120,1800:0,217,255:40,0 chr1 167865871 . G A, 50.00 PASS DP=104;MQ=249.26;MQRankSum=8.455;ReadPosRankSum=5.787;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,54,0:0.519,0.000:104:27,25,0:23,29,0:48:85,0,50,1923,1759,3682:255,0,255:40,0:5.0000e+01,6.6010e-05,5.2857e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,21,33,21:32,18,26,28 chr1 167865872 . T . PASS END=167865908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:100:0,120,1800:0,255,255:40,1 chr1 167865909 . G . PASS END=167865929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:99:90:0,120,1800:0,238,255:40,0 chr1 167868661 . C . PASS END=167868661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 167868662 . T . PASS END=167868662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 167868663 . T . PASS END=167868672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:26,0 chr1 167868673 . C . PASS END=167868682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 167868683 . A . PASS END=167868684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,873:0,70,255:27,0 chr1 167868685 . A . PASS END=167868763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1072:0,87,255:39,0 chr1 167868764 . T . PASS END=167868764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:35,0 chr1 167868765 . T . PASS END=167868775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1343:0,97,255:37,0 chr1 167868776 . C . PASS END=167868776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr1 167868777 . G . PASS END=167868825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1258:0,81,255:37,0 chr1 167868826 . A . PASS END=167868826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1155:0,55,255:32,0 chr1 167868827 . T . PASS END=167868832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 167868833 . A . PASS END=167868833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:30,0 chr1 167868834 . A . PASS END=167868839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 167868840 . A . PASS END=167868840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:29,0 chr1 167868841 . C . PASS END=167868843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 167868844 . G . PASS END=167868861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,65,255:26,0 chr1 167868862 . C . PASS END=167868862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:19,0 chr1 167868863 . A . PASS END=167868866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 167870900 . C . PASS END=167870911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1025:0,84,255:31,0 chr1 167870912 . G . PASS END=167870912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 167870913 . G . PASS END=167870914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 167870915 . T . PASS END=167870915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 167870916 . G . PASS END=167871059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1158:0,85,255:40,0 chr1 167871254 . C . PASS END=167871292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:115:0,120,1800:0,233,255:40,0 chr1 167873125 . T . PASS END=167873229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,99,1480:0,99,255:40,0 chr1 167874157 . T . PASS END=167874352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:34:0,87,1305:0,88,255:40,0 chr1 167874353 . T . PASS END=167874353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:26,0 chr1 167874354 . G . PASS END=167874357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr1 167874358 . T . PASS END=167874359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr1 167874360 . C . PASS END=167874360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 167874361 . T . PASS END=167874370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,850:0,64,255:23,0 chr1 167874371 . G . PASS END=167874378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:18,0 chr1 167887561 . T . PASS END=167887597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,201,255:40,0 chr1 167889217 . C . PASS END=167889328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,105,1800:0,105,255:40,0 chr1 167889785 . C . PASS END=167889869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,108,1620:0,120,255:40,0 chr1 167893735 . C . PASS END=167893758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,222,255:40,0 chr1 167893759 . G A, 50.00 PASS DP=86;MQ=250.00;MQRankSum=7.981;ReadPosRankSum=2.349;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,43,0:0.500,0.000:86:26,26,0:17,17,0:48:85,0,50,1537,1491,3029:255,0,255:31,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,22,17,26:22,21,16,27 chr1 167893760 . A . PASS END=167893775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:78:0,120,1800:0,218,255:40,0 chr1 167904971 . C . PASS END=167904972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 167904973 . G . PASS END=167904973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 167904974 . C . PASS END=167904974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 167904975 . T . PASS END=167904976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 167904977 . G . PASS END=167904978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 167904979 . T . PASS END=167904998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,559:0,40,255:19,0 chr1 167904999 . T . PASS END=167904999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 167905000 . T . PASS END=167905053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,568:0,40,255:18,0 chr1 167905054 . A . PASS END=167905057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 167905058 . C . PASS END=167905058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 167905059 . T . PASS END=167905068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 167905069 . G . PASS END=167905069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 167905070 . C . PASS END=167905079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 167906150 . A . PASS END=167906201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:32:0,85,1095:0,85,255:40,0 chr1 167906202 . C . PASS END=167906237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:44:0,85,1514:0,85,255:40,0 chr1 167906238 . G . PASS END=167906238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:38,0 chr1 167906239 . A C, 170.40 PASS DP=41;MQ=245.72;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,15,0:0,26,0:120:208,123,0,1580,123,1580:255,129,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,24:0,0,25,16 chr1 167906240 . T . PASS END=167906244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:95:42:0,95,1428:0,95,255:39,0 chr1 167906245 . G . PASS END=167906245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1481:0,79,255:32,0 chr1 167906246 . G . PASS END=167906246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,102,1530:0,110,255:33,0 chr1 167921038 . G . PASS END=167921099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:64:0,120,1800:0,161,255:40,0 chr1 167935867 . G . PASS END=167935959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:62:0,120,1800:0,161,255:40,0 chr1 167944068 . G . PASS END=167944253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,111,1800:0,111,255:40,0 chr1 167956733 . A . PASS END=167956846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:31:0,93,1150:0,93,255:40,0 chr1 167960442 . G . PASS END=167960463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,841:0,62,255:26,0 chr1 167960464 . G . PASS END=167960466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 167960467 . C . PASS END=167960467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 167960468 . T . PASS END=167960528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:28:0,81,1003:0,81,255:40,0 chr1 167960529 . A . PASS END=167960529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1388:0,73,255:34,0 chr1 167960530 . G . PASS END=167960559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:34:0,87,1305:0,94,255:35,0 chr1 167960560 . T . PASS END=167960571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,86,255:26,0 chr1 167960572 . C . PASS END=167960574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 167960575 . C . PASS END=167960577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 167962464 . G . PASS END=167962464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 167962465 . G . PASS END=167962474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 167962475 . G . PASS END=167962498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:31:0,83,1224:0,83,255:40,0 chr1 167962499 . G T, 49.85 PASS DP=48;MQ=177.97;MQRankSum=-1.011;ReadPosRankSum=1.238;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,23,0:0.479,0.000:48:15,12,0:10,11,0:48:85,0,50,818,884,1702:255,0,255:24,0:4.9851e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,17,6:15,10,12,11 chr1 167962500 . C . PASS END=167962536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:46:0,117,1759:0,117,255:40,0 chr1 167962537 . C . PASS END=167962678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:36:0,90,1350:0,108,255:40,0 chr1 167971720 . T . PASS END=167971813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:34:0,84,1260:0,92,255:40,0 chr1 167973108 . G . PASS END=167973227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:33:0,89,1271:0,89,255:40,0 chr1 167973771 . G . PASS END=167973796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1197:0,88,255:37,0 chr1 167973797 . A . PASS END=167973797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1075:0,77,255:35,0 chr1 167973798 . C . PASS END=167974017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:38:0,81,1215:0,113,255:40,0 chr1 167974018 . A . PASS END=167974030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:26:0,60,900:0,78,255:26,0 chr1 167974031 . G . PASS END=167974031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:17,0 chr1 167985019 . A . PASS END=167985062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,576:0,40,255:19,0 chr1 167985063 . C . PASS END=167985064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 167985065 . A . PASS END=167985096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,713:0,47,255:19,0 chr1 167985097 . G . PASS END=167985102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 167985103 . A . PASS END=167985103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 167985104 . A . PASS END=167985106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 167985107 . G . PASS END=167985111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 167985112 . C . PASS END=167985112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr1 167985113 . T . PASS END=167985119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:17,0 chr1 167985120 . A . PASS END=167985120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 167985121 . C . PASS END=167985124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 167985125 . G . PASS END=167985125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 167985126 . C . PASS END=167985127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 167985128 . A . PASS END=167985128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 167985129 . C . PASS END=167985135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 167985136 . C . PASS END=167985141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 167985142 . C . PASS END=167985142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 167985143 . T . PASS END=167985149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 167985150 . T . PASS END=167985150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:9,0 chr1 167985151 . C . PASS END=167985163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:10,0 chr1 167985164 . C . PASS END=167985179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,294:0,24,255:8,0 chr1 167985180 . C . PASS END=167985189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 167988783 . G . PASS END=167988803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 167988804 . C . PASS END=167988804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 167988805 . T . PASS END=167988807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 167988808 . C . PASS END=167988808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 167988809 . T . PASS END=167988812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 167988813 . G . PASS END=167988813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 167988814 . C . PASS END=167988815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 167988816 . C . PASS END=167988816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 167988817 . A . PASS END=167988820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 167988821 . T . PASS END=167988822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 167988823 . A . PASS END=167988823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:13,0 chr1 167992226 . A . PASS END=167992285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,138,255:40,0 chr1 168007609 . A . PASS END=168007726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:42:0,95,1498:0,95,255:40,0 chr1 168012263 . G . PASS END=168012378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:36:0,105,1575:0,108,255:40,0 chr1 168013823 . A . PASS END=168013849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,164,255:40,0 chr1 168013850 . T C, 48.75 PASS DP=68;MQ=249.40;MQRankSum=6.565;ReadPosRankSum=4.193;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,30,0:0.441,0.000:68:18,14,0:20,16,0:47:84,0,50,1044,1359,2403:255,0,255:37,0:4.8750e+01,7.9730e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,20,19,11:16,22,13,17 chr1 168013851 . G . PASS END=168013887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,180,255:40,0 chr1 168013888 . G . PASS END=168013909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,170,255:40,0 chr1 168014138 . C . PASS END=168014414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:31:0,87,1149:0,93,255:40,0 chr1 168014415 . T . PASS END=168014417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 168014418 . C . PASS END=168014418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 168014419 . C . PASS END=168014424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,95,255:26,0 chr1 168014425 . C . PASS END=168014429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:28,0 chr1 168014430 . C . PASS END=168014442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:27:0,60,900:0,67,255:26,0 chr1 168014443 . T . PASS END=168014444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:24:0,57,855:0,72,255:19,0 chr1 168014445 . T . PASS END=168014455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:33:19:0,33,495:0,44,255:12,0 chr1 168014456 . C . PASS END=168014465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:11:0,18,270:0,33,255:6,0 chr1 168020130 . A . PASS END=168020152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,173,255:40,0 chr1 168020153 . T . PASS END=168020171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,191,255:40,0 chr1 168032859 . A . PASS END=168032997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:47:0,108,1620:0,120,255:40,0 chr1 168034828 . A . PASS END=168034980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1134:0,88,255:40,0 chr1 168034981 . C . PASS END=168034984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,74,255:25,0 chr1 168035615 . T . PASS END=168035703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,180,255:40,0 chr1 168037596 . G . PASS END=168037701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:59:0,120,1800:0,134,255:40,0 chr1 168044609 . A . PASS END=168044670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:39:0,82,1344:0,82,255:40,0 chr1 168044671 . T . PASS END=168044671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1253:0,54,255:35,0 chr1 168044672 . A . PASS END=168044673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:39,0 chr1 168054769 . T . PASS END=168054774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 168054775 . C . PASS END=168054806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 168054807 . T . PASS END=168054816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 168054817 . C . PASS END=168054835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 168054836 . A . PASS END=168054853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 168054854 . C . PASS END=168054855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 168054856 . G . LowGQ END=168054858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,318:6,0,255:11,2 chr1 168054859 . C . PASS END=168054870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr1 168054871 . C . PASS END=168054882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 168054883 . C . PASS END=168054884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 168054885 . G . PASS END=168054888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 168054889 . T . PASS END=168054889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 168054890 . G . PASS END=168054918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 168054919 . C . PASS END=168054925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 168054926 . A . PASS END=168054945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:15,0 chr1 168054946 . C . PASS END=168054946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 168054947 . T . PASS END=168055034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,523:0,41,255:19,0 chr1 168056823 . C . PASS END=168056825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 168056826 . T . PASS END=168056909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:34:0,91,1191:0,91,255:40,0 chr1 168056910 . A . PASS END=168056910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 168056911 . C . PASS END=168056925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr1 168056926 . C . PASS END=168056933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,79,255:24,0 chr1 168056934 . T . PASS END=168056934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,984:0,46,255:20,0 chr1 168056935 . A . PASS END=168056942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 168059802 . C . PASS END=168059828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 168059829 . T . PASS END=168059830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 168059831 . T . PASS END=168059831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 168059832 . C . PASS END=168059848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 168059849 . T . PASS END=168059849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 168059850 . G . PASS END=168059864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 168059865 . C . PASS END=168059865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 168059866 . A G, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=3.204;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:7,2,0:4,8,0:48:85,0,50,357,393,750:255,0,255:9,0:4.9897e+01,6.6269e-05,5.3000e+01,3.5749e+02,4.2764e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,6,4:6,5,4,6 chr1 168059867 . C . PASS END=168059879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 168059880 . C . PASS END=168059896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr1 168059897 . A . PASS END=168059903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 168059904 . G . PASS END=168059905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 168059906 . T . PASS END=168059906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr1 168065746 . C . PASS END=168065876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1091:0,89,255:38,0 chr1 168065877 . A . PASS END=168065877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:31,0 chr1 168065878 . T . PASS END=168065891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:35,0 chr1 168065892 . A . PASS END=168065892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1105:0,75,255:31,0 chr1 168065893 . C . PASS END=168066125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1155:0,80,255:40,0 chr1 168066126 . T . PASS END=168066126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 168066127 . T . PASS END=168066133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 168066134 . G . PASS END=168066134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 168066135 . G . PASS END=168066165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1094:0,90,255:30,0 chr1 168066166 . C . PASS END=168066167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 168066168 . G . PASS END=168066179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 168066180 . A . PASS END=168066180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 168066181 . C . PASS END=168066203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:35,0 chr1 168066204 . A . PASS END=168066204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:34,0 chr1 168066205 . C . PASS END=168066205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 168066206 . G . PASS END=168066206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 168066207 . C . PASS END=168066435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:34:0,93,1373:0,98,255:40,0 chr1 168066436 . T . PASS END=168066437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr1 168066438 . G . PASS END=168066449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:42:21:0,42,630:0,59,255:19,0 chr1 168066450 . G . PASS END=168066470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 168073715 . C . PASS END=168073715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 168073716 . G . PASS END=168073716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:15,0 chr1 168073717 . G . PASS END=168073721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 168073722 . T . PASS END=168073722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 168073723 . G . PASS END=168073723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 168073724 . G . PASS END=168073724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 168073725 . C . PASS END=168073727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 168073728 . T . PASS END=168073728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 168073729 . G . PASS END=168073766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:19,0 chr1 168073767 . G . PASS END=168073767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 168073768 . G . PASS END=168073768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 168073769 . T . PASS END=168073771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:25,0 chr1 168073772 . A . PASS END=168073772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 168073773 . G . PASS END=168073773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,831:0,23,255:23,0 chr1 168073774 . G . PASS END=168073774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 168073775 . A . PASS END=168073775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 168073776 . G . PASS END=168073776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:24,0 chr1 168073777 . G . PASS END=168073777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 168073778 . G . PASS END=168073778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,808:0,23,255:24,0 chr1 168073779 . C . PASS END=168073781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:25,0 chr1 168073782 . A . PASS END=168073782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 168073783 . G . PASS END=168073790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,860:0,39,255:25,0 chr1 168073791 . A . PASS END=168073791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 168073792 . C . PASS END=168073792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:22,0 chr1 168073793 . C . PASS END=168073793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:23,0 chr1 168073794 . A . PASS END=168073794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 168073795 . C . PASS END=168073800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,917:0,42,255:25,0 chr1 168073801 . A . PASS END=168073801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:24,0 chr1 168073802 . C . PASS END=168073805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,877:0,42,255:25,0 chr1 168073806 . A . PASS END=168073806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:24,0 chr1 168073807 . G . PASS END=168073810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 168073811 . C . PASS END=168073813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:24,0 chr1 168073814 . T . PASS END=168073814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,828:0,9,255:22,0 chr1 168073815 . C . PASS END=168073815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 168073816 . C . PASS END=168073816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 168073817 . C . PASS END=168073817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 168073818 . T . PASS END=168073818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:25,0 chr1 168073819 . G . PASS END=168073821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:25,0 chr1 168073822 . G . PASS END=168073822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,937:0,29,255:24,0 chr1 168073823 . A . PASS END=168073823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:24,0 chr1 168073824 . T . PASS END=168073824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:23,0 chr1 168073825 . G . PASS END=168073826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 168073827 . A . PASS END=168073828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 168073829 . C . PASS END=168073829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 168073830 . T . PASS END=168073831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 168073832 . G . PASS END=168073832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 168073833 . T . PASS END=168073834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 168073835 . A . PASS END=168073835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr1 168073836 . C . PASS END=168073841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 168073842 . A . PASS END=168073842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,898:0,73,255:28,0 chr1 168073843 . A . PASS END=168073853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1127:0,93,255:31,0 chr1 168073854 . A . PASS END=168073854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1001:0,63,255:27,0 chr1 168073855 . C . PASS END=168073874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1117:0,80,255:29,0 chr1 168073875 . A . PASS END=168073877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:25,0 chr1 168073878 . G . PASS END=168073894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1033:0,87,255:29,0 chr1 168073895 . A . PASS END=168073895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 168073896 . A . PASS END=168073904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 168073905 . T . PASS END=168073928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,71,255:26,0 chr1 168073929 . T . PASS END=168073959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:31,0 chr1 168073960 . C . PASS END=168073960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 168073961 . A . PASS END=168073984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1080:0,80,255:32,0 chr1 168073985 . A . PASS END=168073985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 168073986 . T . PASS END=168073999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 168074000 . T . PASS END=168074000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 168074001 . G . PASS END=168074022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 168074023 . G . PASS END=168074073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 168074074 . G . PASS END=168074077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 168074078 . T . PASS END=168074082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 168074083 . G . PASS END=168074107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:19:0,45,675:0,46,255:19,0 chr1 168074108 . G . PASS END=168074132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 168103114 . C . PASS END=168103138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,239,255:40,0 chr1 168104144 . C . PASS END=168104159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1271:0,89,255:34,0 chr1 168105495 . C . PASS END=168105495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 168105496 . T A, 46.96 PASS DP=17;MQ=250.00;MQRankSum=3.266;ReadPosRankSum=2.161;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,6,0:0.353,0.000:17:6,2,0:5,4,0:46:82,0,50,215,357,571:159,0,255:11,0:4.6961e+01,1.0924e-04,5.3000e+01,2.1459e+02,3.9127e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,3,3:5,6,5,1 chr1 168105497 . G . PASS END=168105498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 168105499 . T . PASS END=168105499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 168105500 . C . PASS END=168105508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 168105509 . T . PASS END=168105514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr1 168105515 . C . PASS END=168105515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 168105516 . C . PASS END=168105533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 168105534 . C . PASS END=168105545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,798:0,63,255:25,0 chr1 168105546 . T . PASS END=168105546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:24,0 chr1 168105547 . T . PASS END=168105547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 168105548 . T . PASS END=168105548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:24,0 chr1 168105549 . G . PASS END=168105553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr1 168105554 . G . PASS END=168105555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 168105556 . G . PASS END=168105556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 168105557 . C . PASS END=168105560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 168105561 . A . PASS END=168105561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 168105562 . C . PASS END=168105562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 168105563 . G . PASS END=168105579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,883:0,64,255:25,0 chr1 168105580 . C . PASS END=168105580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 168105581 . A . PASS END=168105583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 168105584 . G . PASS END=168105584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 168105585 . G . PASS END=168105585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 168105586 . G . PASS END=168105586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 168105587 . C . PASS END=168105587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 168105588 . G . PASS END=168105611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:18,0 chr1 168105612 . G . PASS END=168105612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:14,0 chr1 168105613 . G . PASS END=168105613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 168105614 . C . PASS END=168105620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:12,0 chr1 168105621 . C . PASS END=168105621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:9,0 chr1 168105622 . T . PASS END=168105624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 168105625 . G . PASS END=168105631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 168105632 . C . PASS END=168105632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 168105633 . A . PASS END=168105634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 168106628 . C . PASS END=168106659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,99,1485:0,102,255:36,0 chr1 168148316 . A . PASS END=168148324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:24,0 chr1 168148325 . C . PASS END=168148325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 168148326 . A . PASS END=168148381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,864:0,62,255:26,0 chr1 168148382 . T . PASS END=168148384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 168148385 . A . PASS END=168148409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 168148410 . A . PASS END=168148419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,59,255:19,0 chr1 168153140 . A . PASS END=168153293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:37:0,84,1260:0,85,255:40,0 chr1 168153294 . T . PASS END=168153319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr1 168154017 . G . PASS END=168154116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:52:0,120,1800:0,125,255:40,0 chr1 168160607 . G . PASS END=168160738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,111,1665:0,114,255:40,0 chr1 168161446 . C . PASS END=168161466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:97:0,120,1800:0,253,255:40,0 chr1 168165785 . A . PASS END=168165813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:86:47:0,86,1584:0,86,255:40,0 chr1 168165814 . G . PASS END=168165850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,168,255:40,0 chr1 168165851 . A . PASS END=168165880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,143,255:40,0 chr1 168168157 . G . PASS END=168168219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:72:0,120,1800:0,144,255:40,0 chr1 168169141 . C . PASS END=168169284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:43:0,119,1673:0,119,255:40,0 chr1 168195318 . A . PASS END=168195344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 168195345 . G . PASS END=168195380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:19,0 chr1 168200752 . G . PASS END=168200770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:53:0,120,1800:0,138,255:40,0 chr1 168200771 . T . PASS END=168200838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:57:0,120,1800:0,150,255:40,0 chr1 168201072 . G . PASS END=168201157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:97:47:0,97,1615:0,97,255:40,0 chr1 168204339 . T . PASS END=168204420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,121,255:40,0 chr1 168205827 . T . PASS END=168205862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:76:0,120,1800:0,187,255:40,0 chr1 168205950 . T . PASS END=168206008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,181,255:40,0 chr1 168208369 . G . PASS END=168208398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:106:0,120,1800:0,255,255:40,0 chr1 168211739 . G . PASS END=168211778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,158,255:40,0 chr1 168250329 . A . PASS END=168250335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,868:0,69,255:26,0 chr1 168250336 . T . PASS END=168250531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:31:0,84,1211:0,86,255:40,2 chr1 168260395 . T . PASS END=168260395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 168260398 . A . PASS END=168260402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,246:0,30,246:10,0 chr1 168260403 . T . PASS END=168260403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 168260404 . G . PASS END=168260418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:13,0 chr1 168260419 . G . PASS END=168260426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 168260427 . T . PASS END=168260427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 168260428 . C . PASS END=168260459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:17,0 chr1 168260460 . T . PASS END=168260461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 168260462 . C . PASS END=168260507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,628:0,48,255:18,0 chr1 168260508 . A . PASS END=168260508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,462:0,34,255:16,0 chr1 168260509 . C . PASS END=168260585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,629:0,51,255:19,0 chr1 168260586 . T . PASS END=168260587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,574:0,34,255:15,0 chr1 168260588 . G . PASS END=168260588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 168260589 . G . PASS END=168260589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 168260590 . G . PASS END=168260596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 168260597 . T . PASS END=168260597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 168260598 . G . PASS END=168260608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 168260609 . C . PASS END=168260612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 168260613 . T . PASS END=168260616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 168260617 . C . PASS END=168260627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 168260628 . T . PASS END=168260654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 168260655 . G . PASS END=168260662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 168262382 . A . PASS END=168262407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1194:0,86,255:37,0 chr1 168262408 . T . PASS END=168262408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1223:0,64,255:34,0 chr1 168262409 . G . PASS END=168262479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:94:38:0,94,1394:0,94,255:40,0 chr1 168262480 . C . PASS END=168262503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:45:0,96,1590:0,96,255:40,0 chr1 168262504 . T . PASS END=168262504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1582:0,58,255:36,0 chr1 168262505 . C . PASS END=168262515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:40:0,84,1260:0,87,255:36,0 chr1 168262516 . G . PASS END=168262516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1294:0,48,255:25,0 chr1 168262522 . A AGT,AGTGTGT, 54.22 PASS DP=36;MQ=244.43;MQRankSum=1.898;ReadPosRankSum=0.551;FractionInformativeReads=0.417;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:5,9,1,0:0.600,0.067,0.000:15:1,4,0,0:4,5,1,0:4:57,5,0,69,24,76,78,23,95,93:30,0,255:3,9:5.4218e+01,4.2182e+00,2.0859e+00,6.7964e+01,2.5539e+01,7.8539e+01,1.0980e+02,5.7252e+01,1.2838e+02,1.2758e+02:0.00,2.00,5.00,2.00,4.00,5.00,34.77,36.77,36.77,37.77:3,2,3,7:1,4,5,5 chr1 168262529 . G . PASS END=168262529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:24:34:0,24,360:0,86,255:8,0 chr1 168262531 . G . PASS END=168262531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:24:31:0,24,360:0,93,255:8,0 chr1 168266862 . A . PASS END=168267023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,133,255:40,0 chr1 168269660 . A . PASS END=168269721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,106,1664:0,106,255:40,0 chr1 168274239 . A . PASS END=168274239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 168274246 . T . PASS END=168274434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:82:38:0,82,1305:0,82,255:40,0 chr1 168274436 . T . PASS END=168274436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 168277980 . T . PASS END=168278115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:33:0,83,1186:0,83,255:40,0 chr1 168281934 . C . PASS END=168281934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 168281946 . C . PASS END=168281946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 168281947 . C . PASS END=168281979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 168281980 . G . PASS END=168282014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,496:0,42,255:19,0 chr1 168282015 . C . PASS END=168282023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 168282024 . C . PASS END=168282025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 168282026 . C . PASS END=168282066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:24,0 chr1 168282067 . C . PASS END=168282067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 168282068 . C . PASS END=168282089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,933:0,78,255:26,0 chr1 168282090 . A . PASS END=168282090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 168282091 . C . PASS END=168282092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 168282093 . C . PASS END=168282097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 168282098 . C . PASS END=168282098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 168282099 . G . PASS END=168282100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 168282101 . C . PASS END=168282147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,922:0,62,255:26,0 chr1 168282148 . T . PASS END=168282148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 168282149 . C . PASS END=168282152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 168282153 . C . PASS END=168282159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,800:0,55,255:19,0 chr1 168282160 . G . PASS END=168282162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 168282163 . G . PASS END=168282166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 168282167 . C . PASS END=168282179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,786:0,66,255:22,0 chr1 168282180 . C . PASS END=168282180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 168282181 . G . PASS END=168282191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:22,0 chr1 168282192 . T . PASS END=168282194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,810:0,53,255:19,0 chr1 168282195 . C . PASS END=168282197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 168282198 . A . PASS END=168282198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 168282199 . G . PASS END=168282201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 168282202 . G . PASS END=168282204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 168282205 . G . PASS END=168282205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 168282206 . G . PASS END=168282222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 168282223 . T . PASS END=168282223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 168282224 . C . PASS END=168282233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 168282234 . T . PASS END=168282236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 168282237 . T . PASS END=168282240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 168282270 . G . PASS END=168282270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 168282328 . G . PASS END=168282328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 168282483 . T . PASS END=168282483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 168282498 . A . PASS END=168282498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 168282513 . A . PASS END=168282513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 168282602 . C . PASS END=168282602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 168282611 . C . PASS END=168282611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 168282827 . G . PASS END=168282827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 168282857 . T . PASS END=168282857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,682:0,36,255:19,0 chr1 168282894 . T . PASS END=168282894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 168282935 . G . PASS END=168282935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1363:0,95,255:32,0 chr1 168282986 . A . PASS END=168282986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 168283021 . A . PASS END=168283021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 168283049 . A . PASS END=168283049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 168283194 . C . PASS END=168283194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 168283266 . T . PASS END=168283266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,184,255:40,0 chr1 168283347 . T . PASS END=168283347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 168283444 . T . PASS END=168283444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1459:0,117,255:39,0 chr1 168283470 . C . PASS END=168283470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 168283475 . G . PASS END=168283475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 168283491 . C . PASS END=168283491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 168283565 . T . PASS END=168283565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 168510190 . C . PASS END=168510358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:81:37:0,81,1215:0,85,255:40,0 chr1 168511231 . A . PASS END=168511331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:36:0,84,1260:0,92,255:40,0 chr1 168511332 . T . PASS END=168511336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1094:0,69,255:26,0 chr1 168511337 . T . PASS END=168511340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:28,0 chr1 168511341 . T . PASS END=168511345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,80,255:25,0 chr1 168513142 . C . PASS END=168513146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 168513147 . A . PASS END=168513190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:42:0,120,1800:0,126,255:40,0 chr1 168513191 . G . PASS END=168513202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,127,255:40,0 chr1 168545876 . A . PASS END=168545906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,203,255:40,0 chr1 168545907 . T . PASS END=168545936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:61:0,120,1800:0,162,255:40,0 chr1 168549301 . G . PASS END=168549384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,101,1438:0,101,255:40,0 chr1 168549385 . C . PASS END=168549415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,110,1535:0,110,255:40,0 chr1 168550290 . T . PASS END=168550300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:85:34:0,85,1188:0,85,255:36,0 chr1 168550301 . A . PASS END=168550337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,108,1238:0,108,255:40,0 chr1 168550338 . A G, 28.40 PASS DP=51;MQ=50.74;MQRankSum=-3.928;ReadPosRankSum=3.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,16,0:0.314,0.000:51:16,9,0:19,7,0:28:63,0,45,572,1244,1816:255,0,255:34,0:2.8404e+01,6.3446e-03,4.8056e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,19,10,6:13,22,9,7 chr1 168550339 . T . PASS END=168550375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,153,255:40,0 chr1 168550376 . C . PASS END=168550458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,117,1755:0,125,255:40,0 chr1 168665787 . C . PASS END=168665853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,139,255:40,0 chr1 168670255 . C . PASS END=168670362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:58:0,120,1800:0,169,255:40,0 chr1 168683459 . C . PASS END=168683584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,113,1516:0,113,255:40,0 chr1 168698108 . C . PASS END=168698135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1221:0,83,255:37,0 chr1 168698136 . C . PASS END=168698172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,107,1382:0,107,255:40,0 chr1 168698173 . C T, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.209;ReadPosRankSum=2.868;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,29,0:0.547,0.000:53:9,15,0:15,14,0:48:85,0,49,1034,764,1798:255,0,255:24,0:5.0000e+01,7.0669e-05,5.2041e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,8,22,7:9,15,16,13 chr1 168698174 . G . PASS END=168698210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,163,255:40,0 chr1 168698211 . C . PASS END=168698320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,105,1575:0,123,255:40,0 chr1 168698321 . T . PASS END=168698321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:35:43:0,35,1412:0,35,255:35,0 chr1 168698322 . G . PASS END=168698353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1181:0,88,255:36,0 chr1 168698354 . T . PASS END=168698354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:26,0 chr1 168698355 . A . PASS END=168698368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1133:0,90,255:30,0 chr1 168698369 . A . PASS END=168698393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,74,255:26,0 chr1 168698394 . A . PASS END=168698412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 169076068 . A . PASS END=169076072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 169076073 . C . PASS END=169076073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 169076074 . C . PASS END=169076164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1135:0,83,255:34,0 chr1 169076174 . G . PASS END=169076174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 169080608 . T . PASS END=169080612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 169080613 . A . PASS END=169080613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,618:0,38,255:18,0 chr1 169080614 . T . PASS END=169080633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,929:0,62,255:26,0 chr1 169080634 . T . PASS END=169080655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:29,0 chr1 169080656 . T . PASS END=169080656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 169080657 . C . PASS END=169080661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:30,0 chr1 169080662 . T . PASS END=169080662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 169080663 . C . PASS END=169080706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:31,0 chr1 169080707 . C . PASS END=169080723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:26,0 chr1 169080724 . G . PASS END=169080736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,698:0,44,255:19,0 chr1 169094122 . G . PASS END=169094126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 169094127 . A . PASS END=169094128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 169094129 . A . PASS END=169094129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 169094130 . C . PASS END=169094134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 169094135 . T . PASS END=169094135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 169094136 . C . PASS END=169094137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 169094138 . T . PASS END=169094147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1180:0,86,255:35,0 chr1 169094148 . A . PASS END=169094148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1264:0,72,255:36,0 chr1 169094149 . A . PASS END=169094238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:95:37:0,95,1275:0,95,255:40,0 chr1 169094239 . C . PASS END=169094239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr1 169094240 . A . PASS END=169094252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1219:0,88,255:33,0 chr1 169094253 . G . PASS END=169094253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:29,0 chr1 169094254 . A . PASS END=169094262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1148:0,82,255:31,0 chr1 169094263 . T . PASS END=169094263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:28,0 chr1 169094264 . T . PASS END=169094271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr1 169094272 . G . PASS END=169094272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 169094273 . T . PASS END=169094273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 169094274 . G . PASS END=169094275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 169094276 . C . PASS END=169094276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 169094277 . G . PASS END=169094277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:24,0 chr1 169096462 . A . PASS END=169096467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1217:0,89,255:34,0 chr1 169096468 . C . PASS END=169096468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr1 169096469 . C . PASS END=169096646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:94:37:0,94,1272:0,94,255:40,2 chr1 169099248 . C . PASS END=169099328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:40:0,114,1485:0,115,255:40,0 chr1 169100530 . C . PASS END=169100793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:46:0,120,1800:0,127,255:40,0 chr1 169102023 . C . PASS END=169102055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:78:0,120,1800:0,195,255:40,0 chr1 169128447 . T . PASS END=169128452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:58:0,120,1800:0,167,255:40,0 chr1 169138685 . C . PASS END=169138685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 169138686 . T . PASS END=169138686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 169138687 . C . PASS END=169138692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 169138693 . G . PASS END=169138693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 169138694 . G . PASS END=169138792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:29:0,87,1049:0,87,255:40,0 chr1 169159914 . T . PASS END=169159943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,116,1559:0,116,255:40,0 chr1 169199956 . A . PASS END=169200057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:56:0,111,1665:0,130,255:40,0 chr1 169204369 . A . PASS END=169204437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,0:131:99:110:0,120,1800:0,255,255:40,0 chr1 169206861 . C . PASS END=169206925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:40:0,96,1440:0,96,255:40,0 chr1 169216282 . T . PASS END=169216298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1396:0,101,255:39,0 chr1 169256541 . C . PASS END=169256561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,129,255:40,0 chr1 169256562 . T . PASS END=169256646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,113,1792:0,113,255:40,0 chr1 169267794 . T . PASS END=169267813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,881:0,75,255:26,0 chr1 169267814 . A . PASS END=169267814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 169267815 . A . PASS END=169267818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 169267819 . G . PASS END=169267819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169267820 . G . PASS END=169267820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 169267821 . G . PASS END=169267827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 169267828 . G . PASS END=169267828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:30,0 chr1 169267829 . C . PASS END=169267857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1388:0,98,255:35,0 chr1 169267858 . A . PASS END=169267858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1217:0,53,255:34,1 chr1 169267859 . G . PASS END=169267860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1292:0,70,255:35,1 chr1 169267861 . G . PASS END=169267975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:80:32:0,80,1093:0,80,255:40,0 chr1 169267976 . C . PASS END=169267979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 169267980 . T . PASS END=169267980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:23,0 chr1 169267981 . G . PASS END=169267982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 169267983 . A . PASS END=169267983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:25,0 chr1 169267984 . A . PASS END=169267985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 169267986 . A . PASS END=169267986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:24,0 chr1 169267987 . A . PASS END=169267998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,842:0,61,255:25,0 chr1 169267999 . T . PASS END=169268001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 169272383 . T . PASS END=169272409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,230,255:40,0 chr1 169272410 . A . PASS END=169272433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,239,255:40,0 chr1 169279208 . C . PASS END=169279318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:54:0,111,1665:0,137,255:40,0 chr1 169292355 . T . PASS END=169292358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1000:0,87,255:29,0 chr1 169292359 . C . PASS END=169292359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 169292360 . T . PASS END=169292361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 169292362 . T . PASS END=169292362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 169292363 . C . PASS END=169292521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:87:29:0,87,1049:0,87,255:40,0 chr1 169293631 . C . PASS END=169293738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:56:0,120,1800:0,144,255:40,0 chr1 169336946 . C . PASS END=169336948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 169338761 . A . PASS END=169338788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,1:111:99:110:0,120,1800:0,255,255:40,0 chr1 169345778 . T . PASS END=169345780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 169345781 . C . PASS END=169346274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:30:0,84,1157:0,84,255:40,0 chr1 169347568 . G . PASS END=169347754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:31:0,81,1215:0,88,255:40,0 chr1 169347755 . T . PASS END=169347755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 169347756 . C . PASS END=169347757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1063:0,84,255:28,0 chr1 169347758 . T . PASS END=169347767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 169349719 . G . PASS END=169349785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1141:0,81,255:40,0 chr1 169349786 . G . PASS END=169349822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,113,1545:0,113,255:40,0 chr1 169349823 . G A, 48.42 PASS DP=41;MQ=250.00;MQRankSum=5.385;ReadPosRankSum=4.168;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,17,0:0.415,0.000:41:14,7,0:10,10,0:46:83,0,47,183,183,183:255,0,255:23,0:4.8422e+01,1.0587e-04,5.0000e+01,1.8319e+02,2.1796e+02,1.8620e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,14,8,9:14,10,10,7 chr1 169349824 . T . PASS END=169349847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:40:0,84,1416:0,84,255:40,0 chr1 169351300 . A . PASS END=169351519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,107,1542:0,107,255:40,0 chr1 169356235 . G . PASS END=169356420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,114,1710:0,128,255:40,0 chr1 169364285 . T . PASS END=169364300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:30,0 chr1 169364301 . G . PASS END=169364301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:29,0 chr1 169364302 . T . PASS END=169364309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:31,0 chr1 169364310 . A . PASS END=169364310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 169364311 . A . PASS END=169364314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,984:0,93,255:31,0 chr1 169364315 . T . PASS END=169364315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:30,0 chr1 169364316 . T . PASS END=169364325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:32,0 chr1 169364326 . A . PASS END=169364326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 169364327 . C . PASS END=169364444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:33:0,90,1241:0,90,255:40,0 chr1 169366475 . T . PASS END=169366629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:40:0,120,1476:0,120,255:40,2 chr1 169388209 . T . PASS END=169388397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:92:58:0,92,1800:0,92,255:40,0 chr1 169390601 . C . PASS END=169391116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1128:0,86,255:40,0 chr1 169391117 . C . PASS END=169391153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,204,255:40,0 chr1 169391154 . A G, 48.00 PASS DP=86;MQ=249.95;MQRankSum=7.436;ReadPosRankSum=4.959;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,36,0:0.419,0.000:86:22,19,0:28,17,0:47:83,0,50,1259,1599,2858:255,0,255:40,0:4.8001e+01,9.0602e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,23,16,20:27,23,19,17 chr1 169391155 . A . PASS END=169391191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,195,255:40,0 chr1 169391192 . A . PASS END=169391537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:81:31:0,81,1215:0,81,255:40,0 chr1 169391538 . T . PASS END=169391551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 169394049 . C . PASS END=169394165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:81:0,120,1800:0,226,255:40,0 chr1 169433159 . A . PASS END=169433160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1270:0,111,255:37,0 chr1 169433178 . A . PASS END=169433178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1319:0,97,255:33,0 chr1 169433499 . A . PASS END=169433499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 169433540 . A . PASS END=169433540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:77:0,120,1800:0,215,255:40,0 chr1 169433544 . G . PASS END=169433544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr1 169433563 . G . PASS END=169433564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:78:0,120,1800:0,218,255:40,0 chr1 169433594 . C . PASS END=169433594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:70:0,120,1800:0,155,255:40,0 chr1 169433738 . A . PASS END=169433738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 169433841 . A . PASS END=169433841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 169433901 . T . PASS END=169433901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 169434187 . A . PASS END=169434187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 169434374 . T . PASS END=169434374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 169434429 . A . PASS END=169434429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 169434449 . C . PASS END=169434449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 169434460 . G . PASS END=169434460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,175,255:40,0 chr1 169434647 . A . PASS END=169434647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 169434697 . A . PASS END=169434697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 169434832 . T . PASS END=169434832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 169434913 . G . PASS END=169434913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 169435036 . G . PASS END=169435036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 169435056 . T . PASS END=169435056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr1 169435087 . T . PASS END=169435215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:68:0,120,1800:0,188,255:40,0 chr1 169437349 . C . PASS END=169437357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1235:0,102,255:35,0 chr1 169437358 . A . PASS END=169437358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:34,0 chr1 169437359 . A . PASS END=169437490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:34:0,88,1083:0,88,255:40,0 chr1 169437882 . G . PASS END=169437887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr1 169437888 . A . PASS END=169437892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 169437893 . G . PASS END=169437895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 169437896 . G . PASS END=169437898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 169437899 . T . PASS END=169437899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 169437900 . A . PASS END=169437916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:19,0 chr1 169437917 . G . PASS END=169437923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:23,0 chr1 169437924 . A . PASS END=169438074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:27:0,81,1019:0,81,255:40,0 chr1 169439202 . C . PASS END=169439203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 169439204 . A . PASS END=169439204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 169439205 . G . PASS END=169439226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,515:0,42,255:16,0 chr1 169439227 . G . PASS END=169439227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 169439228 . C . PASS END=169439240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,529:0,40,255:19,0 chr1 169439241 . T . PASS END=169439241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 169439242 . A . PASS END=169439242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:19,0 chr1 169439243 . G . PASS END=169439245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 169439246 . G . PASS END=169439246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 169439247 . C . PASS END=169439248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr1 169439249 . T . PASS END=169439249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 169439250 . A . PASS END=169439255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:25,0 chr1 169439256 . A . PASS END=169439256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:24,0 chr1 169439257 . A . PASS END=169439257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 169439258 . G . PASS END=169439258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr1 169439259 . G . PASS END=169439265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 169439266 . T . PASS END=169439266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,910:0,50,255:26,0 chr1 169439267 . T . PASS END=169439279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,929:0,65,255:26,0 chr1 169439280 . C . PASS END=169439280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 169439281 . C . PASS END=169439282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 169439283 . G . PASS END=169439296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 169439297 . A . PASS END=169439297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 169439298 . C . PASS END=169439424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:30:0,82,1096:0,82,255:40,0 chr1 169439425 . C . PASS END=169439425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 169446387 . G . PASS END=169446387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 169446391 . A . PASS END=169446391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 169446393 . C . PASS END=169446402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:19,0 chr1 169446403 . A . PASS END=169446414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:23,0 chr1 169446415 . T . PASS END=169446415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 169446416 . C . PASS END=169446419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr1 169446420 . A . PASS END=169446420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,869:0,34,255:25,0 chr1 169446421 . T . PASS END=169446435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 169446436 . G . PASS END=169446446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 169446447 . C . PASS END=169446448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 169446449 . C . PASS END=169446464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:26,0 chr1 169446465 . G . PASS END=169446473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 169446474 . T . PASS END=169446481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 169446482 . C . PASS END=169446489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 169446490 . A . PASS END=169446490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 169446491 . T . PASS END=169446493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 169446494 . C . PASS END=169446498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 169446499 . T . PASS END=169446504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 169446505 . A . PASS END=169446505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 169446506 . C . PASS END=169446517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 169446518 . T . PASS END=169446523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 169446524 . T . PASS END=169446526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169446527 . G . PASS END=169446530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1053:0,71,255:26,0 chr1 169446531 . G . PASS END=169446535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 169446536 . A . PASS END=169446539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 169446540 . A . PASS END=169446555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1133:0,90,255:30,0 chr1 169446556 . A . PASS END=169446560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 169446561 . C T, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=2.903;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:6,7,0:9,8,0:48:85,0,50,536,532,1069:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,6,9:6,9,4,11 chr1 169446562 . T . PASS END=169446579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 169446580 . A . PASS END=169446583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 169446584 . A . PASS END=169446584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 169446585 . G . PASS END=169446598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1019:0,81,255:29,0 chr1 169446599 . C . PASS END=169446604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1111:0,87,255:30,0 chr1 169446605 . A . PASS END=169446605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 169446606 . A . PASS END=169446619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1097:0,80,255:31,0 chr1 169446620 . A . PASS END=169446620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:27,0 chr1 169446621 . G . PASS END=169446638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1194:0,83,255:31,0 chr1 169446639 . C . PASS END=169446639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:29,0 chr1 169446640 . A . PASS END=169446656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:31,0 chr1 169446657 . T . PASS END=169446657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:29,0 chr1 169446658 . G . PASS END=169446902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:32:0,83,1027:0,83,255:40,1 chr1 169446903 . A . PASS END=169446903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:27,0 chr1 169446904 . G . PASS END=169446904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1169:0,55,255:26,0 chr1 169446905 . G . PASS END=169446909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1183:0,91,255:30,0 chr1 169446910 . T . PASS END=169446910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1200:0,61,255:29,0 chr1 169446911 . A . PASS END=169446911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1311:0,95,255:31,0 chr1 169446912 . A . PASS END=169446912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:30,0 chr1 169446913 . C . PASS END=169446922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:37:0,86,1352:0,86,255:38,0 chr1 169446923 . C . PASS END=169446923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:37,0 chr1 169446924 . T . PASS END=169446928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1333:0,84,255:38,0 chr1 169446929 . C . PASS END=169446929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:37,0 chr1 169446930 . A . PASS END=169446932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1441:0,101,255:36,0 chr1 169446933 . G . PASS END=169446933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:34,0 chr1 169446934 . A . PASS END=169446946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1215:0,84,255:36,0 chr1 169446947 . G . PASS END=169446947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1202:0,61,255:27,0 chr1 169446948 . T . PASS END=169446951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1127:0,83,255:29,0 chr1 169446952 . A . PASS END=169446952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:26,0 chr1 169446953 . C . PASS END=169446953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 169446954 . C . PASS END=169446954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:26,0 chr1 169446955 . A . PASS END=169446955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:25,0 chr1 169446956 . G . PASS END=169446956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169446957 . G . PASS END=169446957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 169446958 . T . PASS END=169446958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169446959 . A . PASS END=169446959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:22,0 chr1 169446960 . A . PASS END=169446963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,990:0,67,255:22,0 chr1 169446964 . T . PASS END=169446969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:48:27:0,48,765:0,48,255:19,0 chr1 169446970 . C . PASS END=169446970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,731:0,17,255:16,0 chr1 169446971 . A . PASS END=169446971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:16,0 chr1 169446972 . T . PASS END=169446974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,52,255:17,0 chr1 169446975 . T . PASS END=169446975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:14,0 chr1 169446976 . G . PASS END=169446979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,599:0,40,255:15,0 chr1 169446980 . A . PASS END=169446980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,604:0,23,255:14,0 chr1 169446981 . A . PASS END=169446981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 169446982 . A . PASS END=169446982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:13,0 chr1 169446983 . T . PASS END=169446983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 169446984 . T . PASS END=169446985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:33:18:0,33,495:0,37,255:12,0 chr1 169446986 . C . PASS END=169446986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,565:0,7,255:10,0 chr1 169446987 . A . PASS END=169446987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,490:0,21,255:10,0 chr1 169446988 . T . PASS END=169446989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 169446990 . G . PASS END=169446990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:9,0 chr1 169446991 . A . PASS END=169446995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,34,255:12,0 chr1 169447008 . GA G,GAA, 0.20 DRAGENIndelHardQUAL DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=0.059;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,4,2,0:0.267,0.133,0.000:15:2,2,2,0:7,2,0,0:13:0,2,52,19,45,69,21,58,69,72:163,0,255:9,6:2.0162e-01,1.3526e+01,6.6526e+01,3.0177e+01,6.6775e+01,8.3177e+01,5.6250e+01,1.0415e+02,1.1520e+02,1.0951e+02:0.00,11.00,14.00,11.00,22.00,14.00,34.77,45.77,45.77,37.77:3,6,1,5:6,3,3,3 chr1 169454801 . C . PASS END=169454805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 169454806 . T . PASS END=169454806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:12,0 chr1 169454807 . C . PASS END=169454808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 169454809 . C . PASS END=169454836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:19,0 chr1 169454837 . G . PASS END=169454839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 169454840 . C . PASS END=169454841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 169454842 . G . PASS END=169454859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 169454860 . A . PASS END=169454902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,589:0,48,255:18,0 chr1 169454903 . G . PASS END=169454903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 169454904 . G . PASS END=169454926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,489:0,45,255:16,0 chr1 169454927 . A . PASS END=169454946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 169454947 . G . PASS END=169454950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 169454951 . C . PASS END=169454951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 169454952 . A . PASS END=169454952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 169454953 . C . PASS END=169454970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,398:0,36,255:12,0 chr1 169454971 . C . PASS END=169454980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,449:0,36,255:12,0 chr1 169454981 . A . PASS END=169454997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,319:0,27,255:9,0 chr1 169454998 . C . PASS END=169454998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 169454999 . A . PASS END=169455001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 169455002 . C . PASS END=169455004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 169455006 . C . PASS END=169455006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 169455016 . G . PASS END=169455016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 169455107 . C . PASS END=169455107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 169455118 . G . PASS END=169455118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 169455167 . C . PASS END=169455167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 169455200 . G . PASS END=169455200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 169481200 . G . PASS END=169481200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 169481403 . G . PASS END=169481403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 169481498 . C . PASS END=169481498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 169481514 . C . PASS END=169481514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 169481612 . A . PASS END=169481612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 169481639 . G . PASS END=169481639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 169481694 . C . PASS END=169481694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 169481771 . C . PASS END=169481771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:34,0 chr1 169481775 . T . PASS END=169481775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 169481836 . A . PASS END=169481836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 169481852 . C . PASS END=169481852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 169481938 . T . PASS END=169481938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 169482020 . G . PASS END=169482020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 169482063 . A . PASS END=169482063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 169482118 . C . PASS END=169482119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 169482147 . C . PASS END=169482147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 169482381 . C . PASS END=169482381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 169482419 . T . PASS END=169482419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 169482508 . A . PASS END=169482508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 169482660 . T . PASS END=169482660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 169482679 . G . PASS END=169482679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 169482713 . A . PASS END=169482713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 169482789 . C . PASS END=169482789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 169482953 . A . PASS END=169482953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr1 169482970 . G . PASS END=169482970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 169483075 . G . PASS END=169483075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 169483110 . G . PASS END=169483110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 169483151 . G . PASS END=169483151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,102,1530:0,123,255:34,0 chr1 169483155 . G . PASS END=169483155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 169483161 . G . PASS END=169483161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 169483185 . T . PASS END=169483185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 169483188 . A . PASS END=169483188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 169483263 . A . PASS END=169483263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 169483335 . A . PASS END=169483335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 169483394 . T . PASS END=169483394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 169483402 . G . PASS END=169483402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,154,255:40,0 chr1 169483447 . T . PASS END=169483447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr1 169483476 . C . PASS END=169483476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 169483551 . C . PASS END=169483696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:47:0,120,1800:0,123,255:40,0 chr1 169483697 . T . PASS END=169483697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1446:0,77,255:40,0 chr1 169484682 . C . PASS END=169484864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,108,1507:0,108,255:40,0 chr1 169487650 . C . PASS END=169487658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:31,0 chr1 169487659 . C . PASS END=169487659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 169487660 . C . PASS END=169487801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:31:0,93,1111:0,93,255:40,0 chr1 169489751 . A . PASS END=169489751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr1 169489758 . C . PASS END=169489902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:35:0,93,1327:0,95,255:40,0 chr1 169492435 . C . PASS END=169492441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:32,0 chr1 169492442 . T . PASS END=169492442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 169492443 . T . PASS END=169492445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1276:0,108,255:36,0 chr1 169492446 . T . PASS END=169492446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1237:0,77,255:35,0 chr1 169492447 . T . PASS END=169492590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:36:0,96,1335:0,96,255:40,0 chr1 169493039 . C . PASS END=169493142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:48:0,113,1800:0,113,255:40,0 chr1 169493149 . T . PASS END=169493149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 169494071 . T . PASS END=169494071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 169494075 . C . PASS END=169494146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,129,255:40,0 chr1 169495139 . C . PASS END=169495255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:96:38:0,96,1382:0,96,255:40,0 chr1 169497153 . C . PASS END=169497153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 169497154 . A . PASS END=169497154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 169497155 . G . PASS END=169497169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,853:0,69,255:24,0 chr1 169497170 . A . PASS END=169497170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 169497171 . C . PASS END=169497301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1096:0,90,255:40,0 chr1 169497302 . C . PASS END=169497302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1260:0,75,255:32,0 chr1 169497303 . C . PASS END=169497330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:35,0 chr1 169497331 . G . PASS END=169497331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 169497332 . G . PASS END=169497332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 169498835 . G . PASS END=169498835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 169498846 . C . PASS END=169498853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1388:0,101,255:39,0 chr1 169498854 . T . PASS END=169498854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:37,0 chr1 169498855 . C . PASS END=169498864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1316:0,100,255:39,0 chr1 169498865 . T . PASS END=169498865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1386:0,65,255:38,0 chr1 169498866 . T . PASS END=169498871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1421:0,104,255:40,0 chr1 169498872 . T . PASS END=169499046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:31:0,81,1149:0,93,255:40,0 chr1 169499047 . T . PASS END=169499056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1061:0,71,255:25,0 chr1 169499066 . C . PASS END=169499066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 169500024 . T . PASS END=169500033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,720:0,44,255:19,0 chr1 169500034 . G . PASS END=169500036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 169500037 . G . PASS END=169500037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 169500038 . A . PASS END=169500039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 169500040 . T . PASS END=169500040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:20,0 chr1 169500041 . A . PASS END=169500043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 169500044 . A . PASS END=169500044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 169500045 . G . PASS END=169500077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 169500078 . T . PASS END=169500078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 169500079 . G . PASS END=169500085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,839:0,66,255:24,0 chr1 169500086 . A . PASS END=169500086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 169500087 . T . PASS END=169500099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,884:0,72,255:24,0 chr1 169500100 . T . PASS END=169500100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 169500101 . G . PASS END=169500111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1014:0,68,255:26,0 chr1 169500112 . G . PASS END=169500117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 169500118 . C . PASS END=169500120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 169500121 . C . PASS END=169500194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1019:0,80,255:35,0 chr1 169500195 . T . PASS END=169500195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:34,0 chr1 169500196 . T . PASS END=169500197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1236:0,105,255:35,0 chr1 169500198 . T . PASS END=169500198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:34,0 chr1 169500199 . T . PASS END=169500228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:36,0 chr1 169500229 . T . PASS END=169500229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:27,0 chr1 169500230 . A . PASS END=169500234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 169500235 . C . PASS END=169500235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 169500236 . T . PASS END=169500236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 169500237 . G . PASS END=169500237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr1 169500238 . G . PASS END=169500238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 169500239 . A . PASS END=169500239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:27,0 chr1 169500240 . T . PASS END=169500240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 169500241 . G . PASS END=169500260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,886:0,64,255:26,0 chr1 169500274 . T . PASS END=169500274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 169505744 . T . PASS END=169505902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:36:0,81,1260:0,81,255:40,0 chr1 169505903 . T . PASS END=169505918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:26:0,63,945:0,78,255:26,0 chr1 169509532 . C . PASS END=169509546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1126:0,96,255:32,0 chr1 169509547 . G . PASS END=169509547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:34,0 chr1 169509548 . A . PASS END=169509568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:35:0,89,1249:0,89,255:40,0 chr1 169509569 . C . PASS END=169509569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1455:0,71,255:38,0 chr1 169509570 . A . PASS END=169510195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:41:0,97,1491:0,97,255:40,0 chr1 169510196 . C . PASS END=169510232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:45:0,91,1544:0,91,255:40,0 chr1 169510233 . G A, 50.00 PASS DP=50;MQ=164.74;MQRankSum=0.113;ReadPosRankSum=3.351;FractionInformativeReads=0.960;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,24,0:0.500,0.000:48:9,10,0:15,14,0:48:85,0,50,753,854,1607:255,0,255:20,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,8,11,13:9,15,13,11 chr1 169510234 . G . PASS END=169510258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,107,1800:0,107,255:40,0 chr1 169510259 . G . PASS END=169510259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1839:0,71,255:40,0 chr1 169510260 . G . PASS END=169510270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,155,255:40,0 chr1 169510271 . C . PASS END=169510437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:59:0,106,1800:0,106,255:40,0 chr1 169510438 . T . PASS END=169510474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,165,255:40,0 chr1 169510475 . G T, 49.70 PASS DP=74;MQ=162.98;MQRankSum=0.639;ReadPosRankSum=4.060;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,35,0:0.473,0.000:74:15,13,0:24,22,0:48:84,0,50,1158,1364,2521:255,0,255:30,0:4.9702e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,19,13,22:18,21,19,16 chr1 169510476 . G . PASS END=169510512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,128,255:40,0 chr1 169510513 . C . PASS END=169510715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:60:0,116,1800:0,116,255:40,0 chr1 169510716 . G . PASS END=169510790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:86:44:0,86,1576:0,86,255:40,0 chr1 169510791 . A . PASS END=169512003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:38:0,96,1339:0,96,255:40,0 chr1 169512004 . G . PASS END=169512004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1429:0,57,255:39,0 chr1 169512005 . A . PASS END=169512258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:40:0,85,1336:0,85,255:40,0 chr1 169512259 . T . PASS END=169512259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1378:0,76,255:37,0 chr1 169512260 . C . PASS END=169512352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1174:0,83,255:40,0 chr1 169513534 . C . PASS END=169513535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 169513536 . A . PASS END=169513536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 169513537 . C . PASS END=169513549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1135:0,80,255:35,0 chr1 169513550 . G . PASS END=169513550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:33,0 chr1 169513551 . A . PASS END=169513761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:89:35:0,89,1279:0,89,255:40,0 chr1 169515680 . T . PASS END=169515830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:96:43:0,96,1440:0,119,255:40,0 chr1 169519039 . C . PASS END=169519043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:18,0 chr1 169519044 . T . PASS END=169519044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 169519045 . T . PASS END=169519045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 169519046 . C . PASS END=169519048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 169519049 . T C, 111.80 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,12,0:0,10,0:62:150,65,0,250,250,250:255,66,0:0,0:1.1180e+02,6.1800e+01,2.8475e-06,2.4657e+02,2.8134e+02,2.4958e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,8:0,0,10,12 chr1 169519050 . G . PASS END=169519060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:22:0,66,803:0,66,255:26,0 chr1 169519061 . G . PASS END=169519063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:28,0 chr1 169519064 . C . PASS END=169519064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 169519065 . T . PASS END=169519065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 169519066 . G . PASS END=169519066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 169519067 . C . PASS END=169519086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:32:0,82,1111:0,82,255:40,0 chr1 169519087 . T . PASS END=169519253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:36:0,87,1305:0,90,255:40,0 chr1 169519878 . C . PASS END=169519977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,163,255:40,0 chr1 169519979 . T . PASS END=169519979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 169519990 . A . PASS END=169519990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 169521795 . T . PASS END=169521811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,112,1590:0,112,255:40,0 chr1 169521812 . C . PASS END=169521848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,134,255:40,0 chr1 169521849 . T C, 50.00 PASS DP=63;MQ=249.17;MQRankSum=6.666;ReadPosRankSum=5.317;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,38,0:0.603,0.000:63:12,21,0:13,17,0:46:85,0,46,1335,836,2172:255,0,255:25,0:5.0000e+01,9.8109e-05,4.8992e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,15,21,17:9,16,14,24 chr1 169521850 . T . PASS END=169521886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,174,255:40,0 chr1 169521887 . C . PASS END=169521972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,108,1620:0,119,255:40,0 chr1 169524420 . T . PASS END=169524585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:35:0,81,1215:0,82,255:40,0 chr1 169524587 . T . PASS END=169524587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:32:0,54,810:0,66,255:17,0 chr1 169525884 . C . PASS END=169525895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 169525896 . T . PASS END=169525896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 169525897 . T . PASS END=169526099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:29:0,81,1060:0,82,255:40,0 chr1 169526100 . T . PASS END=169526100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 169526101 . T . PASS END=169526105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 169528391 . C . PASS END=169528530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1111:0,90,255:40,0 chr1 169528531 . G . PASS END=169528534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 169529781 . G . PASS END=169529781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 169529792 . C . PASS END=169529792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 169529793 . T . PASS END=169529794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr1 169529795 . T . PASS END=169529806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,645:0,43,255:19,0 chr1 169529807 . G . PASS END=169529826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,715:0,60,255:26,0 chr1 169529827 . G . PASS END=169529834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 169529835 . A . PASS END=169529835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 169529836 . T . PASS END=169529846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 169529847 . A . PASS END=169529852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 169529853 . A . PASS END=169529853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 169529854 . T . PASS END=169529856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 169529857 . G . PASS END=169529857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 169529858 . A . PASS END=169529858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 169529859 . G . PASS END=169529990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:29:0,80,1139:0,80,255:40,0 chr1 169529991 . A . PASS END=169529991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:27,0 chr1 169529992 . A . PASS END=169529995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 169529996 . A . PASS END=169529996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 169529997 . A . PASS END=169529998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 169529999 . A . PASS END=169530004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:29:0,62,990:0,62,255:26,0 chr1 169541459 . C . PASS END=169541581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:37:0,96,1358:0,96,255:40,0 chr1 169551669 . C . PASS END=169551681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,131,255:40,0 chr1 169551682 . T C, 50.00 PASS DP=61;MQ=250.00;MQRankSum=6.658;ReadPosRankSum=-0.022;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,34,0:0.557,0.000:61:13,20,0:14,14,0:48:85,0,49,1171,929,2100:255,0,255:27,0:5.0000e+01,7.1705e-05,5.1858e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,11,23,11:14,13,19,15 chr1 169551683 . T . PASS END=169551719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,150,255:40,0 chr1 169551720 . T . PASS END=169551760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,137,255:40,0 chr1 169555467 . C . PASS END=169555472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 169555473 . T . PASS END=169555473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,804:0,64,255:26,0 chr1 169555474 . T . PASS END=169555490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:30,0 chr1 169555491 . T . PASS END=169555491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 169555492 . A . PASS END=169555624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:31:0,80,980:0,80,255:40,0 chr1 169555664 . A . PASS END=169555664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 169555708 . C . PASS END=169555708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 169555734 . G . PASS END=169555734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 169559386 . T . PASS END=169559440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:69:0,120,1800:0,183,255:40,0 chr1 169560664 . C . PASS END=169560684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:106:0,120,1800:0,247,255:40,0 chr1 169560685 . T . PASS END=169560694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,3:111:99:105:0,120,1800:0,255,255:40,0 chr1 169562843 . C . PASS END=169562852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 169562853 . G . PASS END=169562853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 169562854 . A . PASS END=169562864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,937:0,65,255:26,0 chr1 169562865 . T . PASS END=169562870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 169562871 . A . PASS END=169562871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:31,0 chr1 169562872 . G . PASS END=169562959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1213:0,83,255:37,0 chr1 169562960 . C . PASS END=169562962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1031:0,71,255:25,0 chr1 169563930 . C . PASS END=169563936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,755:0,61,255:26,0 chr1 169563937 . G . PASS END=169563938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 169563939 . T . PASS END=169563939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,875:0,70,255:27,0 chr1 169563940 . T . PASS END=169563940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 169563941 . G . PASS END=169563941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 169563942 . G . PASS END=169563950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1274:0,96,255:35,0 chr1 169563951 . T G, 50.00 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=1.540;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,19,0:0.543,0.000:35:9,8,0:7,11,0:48:85,0,50,651,548,1199:255,0,255:16,0:5.0000e+01,6.7822e-05,5.2507e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,4,11,8:9,7,10,9 chr1 169563952 . T . PASS END=169563952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1349:0,105,255:35,0 chr1 169563953 . G . PASS END=169563953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:34,0 chr1 169563954 . A . PASS END=169563988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1249:0,89,255:39,0 chr1 169563989 . G . PASS END=169564081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:34:0,85,1151:0,85,255:40,0 chr1 169564082 . G . PASS END=169564082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:28,0 chr1 169564083 . G . PASS END=169564090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1115:0,80,255:30,0 chr1 169564091 . A . PASS END=169564109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,62,255:25,0 chr1 169564110 . T . PASS END=169564110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:19,0 chr1 169564111 . C . PASS END=169564112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 169564113 . C . PASS END=169564115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 169565163 . C . PASS END=169565167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 169565168 . C . PASS END=169565168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 169565169 . A . PASS END=169565185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,651:0,51,255:19,0 chr1 169565186 . G . PASS END=169565220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:25,0 chr1 169565221 . G . PASS END=169565227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1194:0,84,255:31,0 chr1 169565228 . A . PASS END=169565228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 169565229 . T . PASS END=169565328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1202:0,86,255:33,0 chr1 169565329 . G . PASS END=169565359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 169565360 . A . PASS END=169565360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 169565361 . G . PASS END=169565362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 169565363 . G . PASS END=169565372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr1 169566229 . C . PASS END=169566275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:40:0,83,1346:0,83,255:40,0 chr1 169566276 . T . PASS END=169566312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:94:50:0,94,1559:0,94,255:40,0 chr1 169566313 . C T, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.236;ReadPosRankSum=3.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,27,0:0.509,0.000:53:16,17,0:10,10,0:48:85,0,50,966,901,1867:255,0,255:25,0:5.0000e+01,6.5492e-05,5.2958e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,9,9,18:17,9,11,16 chr1 169566314 . A . PASS END=169566350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,117,1755:0,129,255:40,0 chr1 169566351 . C . PASS END=169566379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1260:0,99,255:40,0 chr1 169566380 . C . PASS END=169566395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,74,255:25,0 chr1 169566396 . A . PASS END=169566396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,748:0,41,255:20,0 chr1 169566397 . G . PASS END=169566399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 169566400 . C . PASS END=169566414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,775:0,50,255:19,0 chr1 169572264 . C . PASS END=169572449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:36:0,92,1280:0,92,255:40,1 chr1 169576181 . T . PASS END=169576344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1250:0,91,255:40,0 chr1 169576345 . G . PASS END=169576345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:33,0 chr1 169576346 . G . PASS END=169576372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,92,255:35,0 chr1 169578742 . C . PASS END=169578742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 169578743 . T . PASS END=169578747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 169578748 . A . PASS END=169578748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 169578749 . G . PASS END=169578779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:25,0 chr1 169578780 . T . PASS END=169578780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 169578781 . T . PASS END=169578781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,812:0,28,255:23,0 chr1 169578782 . A . PASS END=169578790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:26,0 chr1 169578791 . A . PASS END=169578796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 169578797 . A . PASS END=169578797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 169578798 . T . PASS END=169578816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1119:0,90,255:33,0 chr1 169578817 . A . PASS END=169578818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 169578819 . C . PASS END=169578838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1186:0,92,255:32,0 chr1 169578839 . A . PASS END=169578839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr1 169578840 . C . PASS END=169578869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,93,255:34,0 chr1 169578870 . G . PASS END=169578870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:29,0 chr1 169578871 . A . PASS END=169578892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1169:0,80,255:30,0 chr1 169578893 . G . PASS END=169578903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:25,0 chr1 169578904 . T . PASS END=169578904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 169578905 . C . PASS END=169578911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:20,0 chr1 169578912 . G . PASS END=169578912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 169578913 . G . PASS END=169578913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 169578914 . C . PASS END=169578914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 169578915 . T . PASS END=169578916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 169578917 . A . PASS END=169578925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 169578926 . A . PASS END=169578926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,590:0,13,255:16,0 chr1 169578927 . G . PASS END=169578927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 169580730 . C . PASS END=169580747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:65:23:0,65,779:0,65,255:26,0 chr1 169580748 . G . PASS END=169580750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 169580751 . C . PASS END=169580751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 169580752 . A . PASS END=169580754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 169580755 . C . PASS END=169580765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 169580766 . A . PASS END=169580766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:28,0 chr1 169580767 . G . PASS END=169580776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1111:0,90,255:34,0 chr1 169580777 . C . PASS END=169580777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:32,0 chr1 169580778 . G . PASS END=169580847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1067:0,85,255:37,0 chr1 169580848 . A . PASS END=169580855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 169580856 . G . PASS END=169580866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:23,0 chr1 169580867 . C . PASS END=169580873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,810:0,53,255:19,0 chr1 169580874 . T . PASS END=169580874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:19,0 chr1 169580875 . G . PASS END=169580880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:19:0,57,714:0,57,255:19,0 chr1 169580881 . T . PASS END=169580883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 169580884 . A . PASS END=169580884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 169580885 . C T, 46.03 PASS DP=20;MQ=250.00;MQRankSum=3.566;ReadPosRankSum=2.694;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,7,0:0.350,0.000:20:7,3,0:6,4,0:45:81,0,50,242,457,699:203,0,255:12,0:4.6028e+01,1.3021e-04,5.3000e+01,2.4232e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,5,2:8,5,1,6 chr1 169580886 . T . PASS END=169580894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:18,0 chr1 169580895 . C . PASS END=169580897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,63,255:12,0 chr1 169580898 . G . PASS END=169580912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:14:0,24,360:0,34,255:9,0 chr1 169580913 . C . PASS END=169580915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:18:13:0,18,270:0,39,255:6,0 chr1 169581455 . C . PASS END=169581472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,664:0,63,255:22,0 chr1 169581473 . G . PASS END=169581473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 169581474 . G . PASS END=169581477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 169581478 . G . PASS END=169581479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 169581480 . C . PASS END=169581480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 169581481 . C . PASS END=169581617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:31:0,83,1111:0,83,255:40,0 chr1 169581618 . C . PASS END=169581628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:28:0,60,900:0,84,255:25,0 chr1 169581629 . G . PASS END=169581632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 169581633 . C . PASS END=169581636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 169581637 . G . PASS END=169581640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 169582166 . C . PASS END=169582171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:19,0 chr1 169582172 . C . PASS END=169582201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:22,0 chr1 169582202 . G . PASS END=169582202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 169582203 . A . PASS END=169582204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 169582205 . G . PASS END=169582205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 169582206 . C . PASS END=169582206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 169582207 . C . PASS END=169582207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 169582208 . A . PASS END=169582218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:24,0 chr1 169582219 . C . PASS END=169582219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 169582220 . T . PASS END=169582229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr1 169582230 . C . PASS END=169582235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1033:0,87,255:29,0 chr1 169582236 . C . PASS END=169582236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 169582237 . T . PASS END=169582237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 169582238 . T . PASS END=169582238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 169582239 . G . PASS END=169582306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1111:0,80,255:32,0 chr1 169582307 . T . PASS END=169582328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 169582329 . G . PASS END=169582329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:19,0 chr1 169582330 . C . PASS END=169582332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 169582333 . A . PASS END=169582339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:21:0,51,765:0,55,255:19,0 chr1 169582340 . C . PASS END=169582350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:17:0,33,495:0,51,255:12,0 chr1 169582351 . C . PASS END=169582352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:16:0,27,405:0,48,255:9,0 chr1 169582824 . C . PASS END=169582825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1182:0,99,255:33,0 chr1 169582826 . T . PASS END=169582826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 169582827 . A . PASS END=169582931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1260:0,81,255:40,0 chr1 169586266 . C . PASS END=169586266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 169586267 . T . PASS END=169586623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1155:0,80,255:40,0 chr1 169586624 . T . PASS END=169586624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr1 169586625 . G . PASS END=169586652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1124:0,82,255:34,0 chr1 169588367 . C . PASS END=169588389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,117,1755:0,123,255:40,0 chr1 169588390 . A . PASS END=169588457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:42:0,96,1440:0,125,255:40,0 chr1 169599310 . C . PASS END=169599312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,208,255:40,0 chr1 169660925 . T . PASS END=169660943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:69:0,120,1800:0,177,255:40,0 chr1 169665676 . C . PASS END=169665694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,126,255:40,0 chr1 169670701 . C . PASS END=169670829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:95:37:0,95,1293:0,95,255:40,0 chr1 169672396 . T . PASS END=169672549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:41:0,82,1434:0,82,255:40,0 chr1 169672550 . A . PASS END=169672561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1260:0,101,255:35,0 chr1 169672562 . T . PASS END=169672567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:63:38:0,63,945:0,101,255:26,0 chr1 169672568 . C . PASS END=169672574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:45:32:0,45,675:0,96,255:18,0 chr1 169672575 . T . PASS END=169672579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,540:0,51,255:12,0 chr1 169672580 . C . PASS END=169672581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:27:25:0,27,405:0,75,255:9,0 chr1 169673709 . C . PASS END=169673709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:25,0 chr1 169673710 . T . PASS END=169673710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 169673711 . T . PASS END=169673726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:26,0 chr1 169673727 . G . PASS END=169673729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 169673730 . A . PASS END=169673730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 169673731 . T . PASS END=169673731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 169673732 . G . PASS END=169673736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 169673737 . G . PASS END=169673823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,987:0,84,255:37,0 chr1 169673824 . G . PASS END=169673824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:32,0 chr1 169673825 . A . PASS END=169673854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,92,255:34,0 chr1 169673855 . G . PASS END=169673856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 169673857 . A . PASS END=169673859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 169673860 . C . PASS END=169673892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,68,255:23,0 chr1 169673893 . C . PASS END=169673894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 169676483 . C . PASS END=169676485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:40,0 chr1 169676486 . A G, 45.94 PASS DP=41;MQ=250.00;MQRankSum=5.332;ReadPosRankSum=2.205;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,16,0:0.390,0.000:41:12,9,0:13,7,0:45:81,0,50,570,831,1401:255,0,255:24,0:4.5939e+01,1.3228e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,14,9,7:10,15,8,8 chr1 169676487 . C . PASS END=169676523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:41:0,93,1482:0,93,255:40,0 chr1 169676524 . C . PASS END=169676587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:32:0,87,1305:0,96,255:40,0 chr1 169676588 . A . PASS END=169676590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:32:0,54,810:0,96,255:18,0 chr1 169677558 . C . PASS END=169677562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 169677563 . T . PASS END=169677563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1059:0,60,255:29,0 chr1 169677564 . A . PASS END=169677588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1069:0,80,255:32,0 chr1 169677589 . G . PASS END=169677589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 169677590 . C . PASS END=169677609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:34,0 chr1 169677610 . G . PASS END=169677610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr1 169677611 . C . PASS END=169677638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1089:0,80,255:32,0 chr1 169677639 . T . PASS END=169677639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:32,0 chr1 169677640 . C . PASS END=169677671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:34:0,96,1364:0,98,255:37,0 chr1 169677672 . T . PASS END=169677708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1388:0,84,255:35,0 chr1 169677709 . A G, 49.52 PASS DP=37;MQ=250.00;MQRankSum=5.166;ReadPosRankSum=1.905;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,17,0:0.459,0.000:37:9,5,0:11,12,0:47:84,0,47,184,184,184:255,0,255:16,0:4.9521e+01,9.1896e-05,5.0000e+01,1.8429e+02,2.1906e+02,1.8730e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,8,7,10:13,7,13,4 chr1 169677710 . A . PASS END=169677711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,95,255:32,0 chr1 169677712 . A . PASS END=169677712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:30,0 chr1 169677713 . G . PASS END=169677716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:33:0,96,1440:0,99,255:32,0 chr1 169677717 . T . PASS END=169677717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:30,0 chr1 169677718 . G . PASS END=169677746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1150:0,80,255:34,0 chr1 169677747 . C . PASS END=169677747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 169677748 . T . PASS END=169677748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr1 169677749 . A . PASS END=169677768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:32,0 chr1 169677769 . G . PASS END=169677769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:32,0 chr1 169677770 . T . PASS END=169677774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1183:0,102,255:34,0 chr1 169677775 . A . PASS END=169677775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:30,0 chr1 169677776 . G . PASS END=169677791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1172:0,83,255:31,0 chr1 169677792 . G . PASS END=169677792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 169677793 . A . PASS END=169677808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1124:0,80,255:29,0 chr1 169677809 . T . PASS END=169677809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 169677810 . C . PASS END=169677810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 169677811 . A . PASS END=169677812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 169677813 . T . PASS END=169677814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 169677815 . T . PASS END=169677816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 169677817 . C . PASS END=169677821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 169677822 . T . PASS END=169677822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 169677823 . G . PASS END=169677824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 169677825 . T . PASS END=169677825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:27,0 chr1 169677826 . T . PASS END=169677827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:29,0 chr1 169677828 . G . PASS END=169677829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1099:0,77,255:28,0 chr1 169677830 . A . PASS END=169677830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 169677831 . T . PASS END=169677833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1100:0,77,255:26,0 chr1 169677834 . C . PASS END=169677842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 169677843 . C . PASS END=169677844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 169677845 . G . PASS END=169677847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 169677848 . T . PASS END=169677848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:26,0 chr1 169677849 . A . PASS END=169677853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169677854 . T . PASS END=169677854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,848:0,64,255:26,0 chr1 169677855 . C . PASS END=169677864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 169677865 . T . PASS END=169677866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 169677867 . T . PASS END=169677872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169677873 . C . PASS END=169677921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,887:0,64,255:26,0 chr1 169677922 . G . PASS END=169677923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 169677924 . T . PASS END=169677924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 169677925 . T . PASS END=169677944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,59,255:19,0 chr1 169679577 . C . PASS END=169679590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,146,255:40,0 chr1 169679591 . G . PASS END=169679658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:64:0,120,1800:0,142,255:40,0 chr1 169680637 . C . PASS END=169680678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:38:0,85,1372:0,85,255:40,0 chr1 169694885 . T . PASS END=169694942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1458:0,107,255:40,0 chr1 169695048 . C . PASS END=169695069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,185,255:40,0 chr1 169695840 . C . PASS END=169695851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr1 169695852 . A . PASS END=169695852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 169695853 . T . PASS END=169695859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,900:0,72,255:26,0 chr1 169695860 . A . PASS END=169695862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 169695863 . C . PASS END=169695864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 169695865 . G . PASS END=169695868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:31,0 chr1 169695869 . A . PASS END=169695871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 169695872 . A . PASS END=169695872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 169695873 . A . PASS END=169695873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 169695874 . T . PASS END=169695929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1153:0,80,255:38,0 chr1 169695930 . T . PASS END=169695930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:29,0 chr1 169695931 . G . PASS END=169695944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1155:0,80,255:31,0 chr1 169695945 . G . PASS END=169695945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 169695946 . A . PASS END=169695947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169696490 . C . PASS END=169696491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 169696492 . T . PASS END=169696492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 169696493 . C . PASS END=169696504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1164:0,90,255:31,0 chr1 169696505 . G . PASS END=169696505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 169696506 . C . PASS END=169696589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1188:0,86,255:36,0 chr1 169696590 . C . PASS END=169696593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:25,0 chr1 169696594 . G . PASS END=169696605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,88,255:29,0 chr1 169696606 . G . PASS END=169696616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,79,255:26,0 chr1 169696617 . G . PASS END=169696622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 169696623 . C . PASS END=169696623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 169696624 . A . PASS END=169696626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 169696627 . T . PASS END=169696654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,969:0,65,255:26,0 chr1 169696655 . A . PASS END=169696658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 169696659 . T . PASS END=169696662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 169696663 . A . PASS END=169696663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 169696664 . C . PASS END=169696666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:20,0 chr1 169696880 . C . PASS END=169696893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,905:0,81,255:30,0 chr1 169696894 . A . PASS END=169696894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 169696895 . C . PASS END=169696906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1156:0,83,255:34,0 chr1 169696907 . A . PASS END=169696907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:33,0 chr1 169696908 . T . PASS END=169697038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:35:0,102,1489:0,102,255:40,0 chr1 169697039 . G . PASS END=169697050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,108,255:35,0 chr1 169697051 . C . PASS END=169697057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,89,255:25,0 chr1 169697058 . G . PASS END=169697058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:22,0 chr1 169697059 . C . PASS END=169697068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 169697199 . C . PASS END=169697203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1144:0,99,255:33,0 chr1 169697204 . C . PASS END=169697375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:35:0,87,1227:0,89,255:40,0 chr1 169697376 . T . PASS END=169697379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,89,255:26,0 chr1 169697380 . C . PASS END=169697381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 169697382 . G . PASS END=169697387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 169698327 . C . PASS END=169698328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 169698329 . T . PASS END=169698336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,610:0,60,255:20,0 chr1 169698337 . T . PASS END=169698337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:18,0 chr1 169698338 . G . PASS END=169698341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr1 169698342 . T . PASS END=169698342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 169698343 . T . PASS END=169698344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 169698345 . G . PASS END=169698345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 169698346 . C . PASS END=169698348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 169698349 . T . PASS END=169698349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 169698350 . G . PASS END=169698369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:26,0 chr1 169698370 . G . PASS END=169698511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1016:0,81,255:39,0 chr1 169698512 . A . PASS END=169698512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:27,0 chr1 169698513 . C . PASS END=169698515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 169698620 . C . PASS END=169698620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 169698629 . C . PASS END=169698751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:35:0,91,1211:0,91,255:40,0 chr1 169698752 . C . PASS END=169698788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,99,1377:0,99,255:40,0 chr1 169698789 . A G, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=3.232;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:12,13,0:8,7,0:48:85,0,50,707,699,1406:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,15,7,13:13,7,8,12 chr1 169698790 . T . PASS END=169698801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1378:0,87,255:36,0 chr1 169698802 . T . PASS END=169698814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,80,255:25,0 chr1 169699573 . C . PASS END=169699584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:24,0 chr1 169699585 . G . PASS END=169699592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 169699593 . G . PASS END=169699593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 169699594 . C . PASS END=169699608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,952:0,84,255:32,0 chr1 169699609 . A . PASS END=169699609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1023:0,27,255:30,0 chr1 169699610 . G . PASS END=169699737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1224:0,83,255:40,0 chr1 169699738 . C . PASS END=169699746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr1 169699747 . T . PASS END=169699758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,720:0,75,255:17,0 chr1 169700502 . T C, 160.89 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,21,0:0,17,0:111:199,114,0,299,299,299:255,117,0:0,0:1.6089e+02,1.1089e+02,0.0000e+00,2.9566e+02,3.3043e+02,2.9867e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,20:0,0,23,15 chr1 169700976 . T . PASS END=169700998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:30:0,83,1058:0,83,255:38,0 chr1 169700999 . A . PASS END=169701011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1390:0,103,255:39,0 chr1 169701012 . A . PASS END=169701012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1188:0,78,255:37,0 chr1 169701013 . C . PASS END=169701022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1422:0,120,255:40,0 chr1 169701023 . T . PASS END=169701046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1330:0,81,255:40,0 chr1 169701047 . T . PASS END=169701047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1435:0,79,255:39,0 chr1 169701048 . C . PASS END=169701059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1426:0,90,255:40,0 chr1 169701060 . T G, 49.61 PASS DP=41;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=2.444;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,19,0:0.463,0.000:41:13,10,0:9,9,0:48:84,0,50,664,758,1422:255,0,255:22,0:4.9614e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,9,10:14,8,10,9 chr1 169701061 . G . PASS END=169701083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:32:0,87,1305:0,96,255:39,0 chr1 169701756 . C . PASS END=169701859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:83:33:0,83,1172:0,83,255:40,0 chr1 169701860 . T . PASS END=169701900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,100,1334:0,100,255:40,0 chr1 169701901 . T C, 48.45 PASS DP=43;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=3.607;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,18,0:0.419,0.000:43:12,11,0:13,7,0:46:83,0,47,183,183,183:255,0,255:24,0:4.8448e+01,1.0562e-04,5.0000e+01,1.8322e+02,2.1799e+02,1.8623e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,17,9,9:13,12,8,10:169701901 chr1 169701902 . T . PASS END=169701903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 169701904 . T C, 48.45 PASS DP=43;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=3.607;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,18,0:0.419,0.000:43:12,11,0:13,7,0:46:83,0,47,183,183,183:255,0,255:22,0:4.8448e+01,1.0562e-04,5.0000e+01,1.8322e+02,2.1799e+02,1.8623e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,17,9,9:13,12,8,10:169701901 chr1 169701905 . G . PASS END=169701945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:38:0,89,1380:0,89,255:40,0 chr1 169701946 . G . PASS END=169702072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:35:0,93,1308:0,95,255:39,0 chr1 169702073 . T . PASS END=169702073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr1 169702074 . C . PASS END=169702131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:35,0 chr1 169702132 . G . PASS END=169702139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 169702717 . C . PASS END=169702753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:71:0,120,1800:0,158,255:40,0 chr1 169761718 . T . PASS END=169762836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:30:0,80,1185:0,80,255:40,0 chr1 169764244 . A . PASS END=169764253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 169764254 . A . PASS END=169764254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:16,0 chr1 169764255 . A . PASS END=169764256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 169764257 . G . PASS END=169764265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,898:0,66,255:24,0 chr1 169764266 . C . PASS END=169764266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 169764267 . A . PASS END=169764267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 169764268 . G . PASS END=169764309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,833:0,72,255:25,0 chr1 169764310 . G . PASS END=169764315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 169764316 . T . PASS END=169764317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 169764318 . C . PASS END=169764318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 169764319 . C . PASS END=169764347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr1 169764348 . A . PASS END=169764354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 169768060 . T . PASS END=169768079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:96:0,120,1800:0,245,255:40,0 chr1 169768080 . C A, 42.89 PASS DP=99;MQ=250.00;MQRankSum=7.949;ReadPosRankSum=7.073;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:68,31,0:0.313,0.000:99:29,15,0:39,16,0:42:78,0,47,178,178,178:255,0,255:40,0:4.2887e+01,2.6689e-04,5.0000e+01,1.7766e+02,2.1243e+02,1.8067e+02:0.00,34.77,37.78,34.77,69.54,37.78:36,32,11,20:41,27,15,16 chr1 169768081 . A . PASS END=169768099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:100:0,120,1800:0,251,255:40,0 chr1 169770024 . A . PASS END=169770112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,177,255:40,0 chr1 169771762 . A . PASS END=169771866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:49:0,120,1800:0,146,255:40,0 chr1 169772310 . A . PASS END=169772310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 169772311 . C . PASS END=169772322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1123:0,80,255:37,0 chr1 169772323 . T . PASS END=169772450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,111,1582:0,116,255:40,0 chr1 169773216 . A . PASS END=169773226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 169773227 . T . PASS END=169773230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:30,0 chr1 169773231 . T . PASS END=169773231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:29,0 chr1 169773232 . A . PASS END=169773389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:80:31:0,80,1177:0,80,255:40,1 chr1 169775145 . T . PASS END=169775229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,138,255:40,0 chr1 169776932 . G . PASS END=169777070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:90:54:0,90,1800:0,90,255:40,0 chr1 169790820 . G . PASS END=169790900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:86:0,120,1800:0,245,255:40,0 chr1 169792549 . G . PASS END=169792604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,6:78:99:66:0,107,1800:0,107,255:40,0 chr1 169792605 . G . PASS END=169792613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,161,255:40,0 chr1 169796192 . C . PASS END=169796330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1156:0,80,255:40,0 chr1 169796331 . A . PASS END=169796331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:27,0 chr1 169796332 . G . PASS END=169796335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 169796336 . A . PASS END=169796336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:26,0 chr1 169796337 . T . PASS END=169796338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 169796339 . A . PASS END=169796340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1147:0,77,255:26,0 chr1 169796852 . A . PASS END=169796870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1132:0,83,255:35,0 chr1 169796871 . G . PASS END=169796871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 169796872 . T . PASS END=169796937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1215:0,89,255:39,0 chr1 169796938 . A . PASS END=169796968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:26,0 chr1 169796969 . A . PASS END=169796981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:18,0 chr1 169798404 . G . PASS END=169798428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:31:0,90,1203:0,91,255:38,0 chr1 169798429 . T . PASS END=169798429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1296:0,51,255:36,0 chr1 169798430 . A . PASS END=169798590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:41:0,84,1399:0,84,255:40,0 chr1 169799400 . G . PASS END=169799482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,100,1620:0,100,255:40,0 chr1 169799837 . A . PASS END=169799842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,158,255:40,0 chr1 169799843 . G . PASS END=169799879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:57:0,120,1800:0,171,255:40,0 chr1 169799880 . G T, 42.72 PASS DP=67;MQ=249.99;MQRankSum=6.741;ReadPosRankSum=3.616;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,24,0:0.358,0.000:67:22,10,0:21,14,0:42:77,0,50,825,1538,2363:255,0,255:39,0:4.2722e+01,2.5369e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,21,10,14:21,22,12,12 chr1 169799881 . C . PASS END=169799888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,182,255:40,0 chr1 169801558 . A . PASS END=169801647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,126,255:40,0 chr1 169806068 . C . PASS END=169806200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:38:0,84,1354:0,84,255:40,0 chr1 169806201 . A . PASS END=169806201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:33,0 chr1 169806202 . A . PASS END=169806202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 169806203 . T . PASS END=169806203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:31,0 chr1 169806204 . G . PASS END=169806239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,1167:0,85,255:33,0 chr1 169806240 . A . PASS END=169806240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 169806241 . A . PASS END=169806242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 169806243 . T . PASS END=169806243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 169806244 . A . PASS END=169806253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1020:0,90,255:30,0 chr1 169811558 . A . PASS END=169811680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:97:38:0,97,1311:0,97,255:40,0 chr1 169812815 . G . PASS END=169812910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:60:0,120,1800:0,140,255:40,0 chr1 169816831 . G . PASS END=169816944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:54:0,117,1755:0,145,255:40,0 chr1 169818641 . G . PASS END=169818662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1170:0,83,255:38,0 chr1 169818663 . C . PASS END=169818663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1418:0,76,255:38,0 chr1 169818664 . C . PASS END=169818726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1215:0,102,255:40,0 chr1 169818727 . G . PASS END=169818727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:26,0 chr1 169818728 . T . PASS END=169818733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:29,0 chr1 169818734 . C . PASS END=169818745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 169819406 . G . PASS END=169819483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:30:0,90,1155:0,90,255:40,0 chr1 169819484 . A . PASS END=169819486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,160,255:40,0 chr1 169819579 . C . PASS END=169819604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,106,1375:0,106,255:40,0 chr1 169819605 . A G, 46.93 PASS DP=52;MQ=249.70;MQRankSum=4.327;ReadPosRankSum=0.988;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,21,0:0.404,0.000:52:17,9,0:14,12,0:46:82,0,50,743,1079,1822:255,0,255:24,0:4.6933e+01,1.0976e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,6,15:19,12,12,9 chr1 169819606 . G . PASS END=169819647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,108,1598:0,114,255:40,0 chr1 169820958 . A . PASS END=169821092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,108,1521:0,108,255:40,0 chr1 169821107 . T . PASS END=169821194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,124,255:40,0 chr1 169821931 . C . PASS END=169821959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,501:0,48,255:19,0 chr1 169821960 . C . PASS END=169821963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 169821964 . T . PASS END=169821964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 169821965 . G . PASS END=169821969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr1 169821970 . G . PASS END=169821970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 169821971 . A . PASS END=169821971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:28,0 chr1 169821972 . A . PASS END=169821973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr1 169821974 . A . PASS END=169821974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 169821975 . G . PASS END=169821977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1157:0,82,255:33,0 chr1 169821978 . C . PASS END=169821978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr1 169821979 . A . PASS END=169822001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:33:0,80,1274:0,80,255:40,0 chr1 169822002 . A . PASS END=169822002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:39,0 chr1 169822003 . G . PASS END=169822119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1215:0,91,255:40,0 chr1 169822120 . C . PASS END=169822125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1108:0,63,255:26,0 chr1 169822126 . T . PASS END=169822127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 169822128 . A . PASS END=169822128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 169822854 . T . PASS END=169822888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:43:0,89,1543:0,89,255:40,0 chr1 169822889 . C . PASS END=169822913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,117,1755:0,129,255:40,0 chr1 169823411 . C . PASS END=169823622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1197:0,84,255:40,0 chr1 169823623 . G . PASS END=169823659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1203:0,88,255:36,0 chr1 169823660 . C T, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.951;ReadPosRankSum=1.708;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,18,0:0.529,0.000:34:9,9,0:7,9,0:48:85,0,50,636,544,1179:255,0,255:16,0:5.0000e+01,6.6786e-05,5.2694e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,6,12:11,5,9,9 chr1 169823661 . A . PASS END=169823717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1148:0,83,255:32,0 chr1 169823718 . T C, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.805;ReadPosRankSum=0.509;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:10,10,0:6,6,0:48:85,0,50,564,572,1137:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,8,8:9,7,8,8 chr1 169823719 . G . PASS END=169823719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr1 169823720 . G . PASS END=169823736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 169823737 . A . PASS END=169823738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 169823739 . G . PASS END=169823789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1405:0,81,255:40,0 chr1 169823790 . C G, 49.15 PASS DP=49;MQ=250.00;MQRankSum=5.960;ReadPosRankSum=1.518;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,22,0:0.449,0.000:49:16,13,0:11,9,0:48:84,0,50,757,880,1636:255,0,255:25,0:4.9147e+01,7.4552e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,12,12,10:14,13,11,11 chr1 169823791 . C . PASS END=169823827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,108,1714:0,108,255:40,0 chr1 169823828 . T . PASS END=169824030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,114,1643:0,116,255:40,0 chr1 169824031 . C . PASS END=169824067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1407:0,104,255:40,0 chr1 169824068 . A G, 49.74 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=0.515;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:12,9,0:9,10,0:48:85,0,50,614,715,1328:255,0,255:21,0:4.9736e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,16,8,11:8,13,12,7 chr1 169824069 . T . PASS END=169824103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:40:0,90,1256:0,90,255:40,0 chr1 169824104 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=0.582;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:12,9,0:8,11,0:48:85,0,50,641,678,1320:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,15,5,15:9,11,10,10 chr1 169824105 . C . PASS END=169824105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr1 169824937 . C . PASS END=169825079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:38:0,100,1354:0,100,255:40,0 chr1 169825080 . A . PASS END=169825080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:54:44:0,54,1414:0,54,255:38,0 chr1 169825081 . C . PASS END=169825098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:35:0,84,1260:0,105,255:39,0 chr1 169828182 . C . PASS END=169828188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,103,1272:0,103,255:40,0 chr1 169828189 . A . PASS END=169828189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1197:0,70,255:37,0 chr1 169828190 . G . PASS END=169828289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:40:0,93,1279:0,93,255:40,0 chr1 169828290 . C . PASS END=169828320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,102,255:39,0 chr1 169828321 . G . PASS END=169828326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:29:0,75,1125:0,87,255:26,0 chr1 169828327 . G A, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=1.085;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,17,0:0.586,0.000:29:7,7,0:5,10,0:48:85,0,48,600,429,1029:255,0,255:11,0:5.0000e+01,7.6882e-05,5.1121e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,7,10:7,5,7,10 chr1 169828328 . C . PASS END=169828335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:27:0,63,945:0,70,255:26,0 chr1 169828336 . A . PASS END=169828336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,904:0,48,255:19,0 chr1 169828337 . C . PASS END=169828341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:20,0 chr1 169828342 . G . PASS END=169828353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr1 169831754 . C . PASS END=169831759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,643:0,41,255:19,0 chr1 169831760 . C . PASS END=169831765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 169831766 . G . PASS END=169831782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 169831783 . C . PASS END=169831788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,860:0,69,255:24,0 chr1 169831789 . T . PASS END=169831789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:24,0 chr1 169831790 . G . PASS END=169831790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 169831791 . A . PASS END=169831791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 169831792 . A . PASS END=169831799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 169831800 . A . PASS END=169831808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 169831809 . T . PASS END=169831809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 169831810 . C . PASS END=169831812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 169831813 . T . PASS END=169831813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 169831814 . G . PASS END=169831858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:31:0,87,1148:0,93,255:39,0 chr1 169831859 . C . PASS END=169831859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 169831860 . A . PASS END=169831892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1341:0,84,255:40,0 chr1 169831893 . A . PASS END=169831893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:31,0 chr1 169831894 . A . PASS END=169831901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1305:0,92,255:33,0 chr1 169831902 . G . PASS END=169831902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:30,0 chr1 169831903 . G . PASS END=169831917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 169831918 . G . PASS END=169831931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:25:0,63,945:0,68,255:25,0 chr1 169831932 . G . PASS END=169831933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 169831934 . A . PASS END=169831934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 169831935 . T . PASS END=169831935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:19,0 chr1 169831936 . G . PASS END=169831938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 169833510 . C . PASS END=169833649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,138,255:40,0 chr1 169836037 . T . PASS END=169836114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,176,255:40,0 chr1 169838069 . C . PASS END=169838180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:52:0,120,1800:0,143,255:40,0 chr1 169839396 . C . PASS END=169839479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,96,255:40,0 chr1 169839480 . G . PASS END=169839498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,73,255:26,0 chr1 169842837 . C . PASS END=169842893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:50:0,120,1800:0,123,255:40,0 chr1 169845119 . C . PASS END=169845232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:36:0,96,1440:0,101,255:40,0 chr1 169847775 . T . PASS END=169847904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,102,255:40,0 chr1 169847905 . T . PASS END=169847905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 169847906 . C . PASS END=169847908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,98,255:27,0 chr1 169847909 . C . PASS END=169847916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:74:30:0,74,1086:0,74,255:26,0 chr1 169847917 . G . PASS END=169847917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 169847918 . A . PASS END=169847934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr1 169847935 . C . PASS END=169847960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,628:0,43,255:18,0 chr1 169857817 . C . PASS END=169857836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:29:0,87,1041:0,87,255:40,0 chr1 169857837 . T . PASS END=169857837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1350:0,65,255:40,0 chr1 169857838 . G . PASS END=169857967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:34:0,81,1305:0,81,255:40,0 chr1 169857968 . T . PASS END=169857971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,86,255:26,0 chr1 169857972 . C . PASS END=169857973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 169857974 . G . PASS END=169857981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,84,255:26,0 chr1 169890817 . T . PASS END=169890895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,120,1800:0,121,255:40,0 chr1 169890896 . G . PASS END=169890922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,130,255:40,0 chr1 169892207 . T . PASS END=169892243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:78:0,120,1800:0,204,255:40,0 chr1 169894951 . T . PASS END=169894996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,149,255:40,0 chr1 169923152 . C . PASS END=169923251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,170,255:40,0 chr1 169930187 . C . PASS END=169930376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,115,1653:0,115,255:40,0 chr1 169941654 . C . PASS END=169941723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,2:113:99:92:0,120,1800:0,255,255:40,0 chr1 169941724 . A . PASS END=169941739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:77:0,120,1800:0,231,255:40,0 chr1 169947226 . G . PASS END=169947324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:71:0,120,1800:0,181,255:40,0 chr1 169951113 . C . PASS END=169951238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:43:0,120,1800:0,129,255:40,0 chr1 169951843 . C . PASS END=169952001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:29:0,81,1209:0,87,255:40,0 chr1 169952002 . C . PASS END=169952008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:36:0,75,1125:0,95,255:25,0 chr1 169952411 . A . PASS END=169952422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,109,1284:0,109,255:40,0 chr1 169952423 . T . PASS END=169952522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:33:0,83,1172:0,83,255:40,0 chr1 169952523 . C . PASS END=169952523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:29,0 chr1 169953723 . C . PASS END=169953831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:77:0,120,1800:0,230,255:40,0 chr1 169961296 . C . PASS END=169961396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,99,1405:0,99,255:40,0 chr1 169985603 . C . PASS END=169985765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:43:0,120,1800:0,129,255:40,0 chr1 169993559 . C . PASS END=169993724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,105,1596:0,105,255:40,0 chr1 169993725 . A . PASS END=169993737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:37:0,84,1373:0,84,255:37,0 chr1 170001027 . C . PASS END=170001125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:73:0,120,1800:0,164,255:40,0 chr1 170003513 . C . PASS END=170003637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:45:0,111,1665:0,122,255:40,0 chr1 170004595 . C . PASS END=170004600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1228:0,89,255:35,0 chr1 170004601 . A . PASS END=170004601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1162:0,75,255:34,0 chr1 170004602 . A . PASS END=170004611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1226:0,91,255:35,0 chr1 170004612 . G . PASS END=170004612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:32,0 chr1 170004613 . A . PASS END=170004621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:91:36:0,91,1168:0,91,255:38,0 chr1 170004622 . A . PASS END=170004622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1457:0,76,255:37,0 chr1 170004623 . T . PASS END=170004683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1260:0,87,255:40,0 chr1 170004684 . A . PASS END=170004684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:25,0 chr1 170004685 . A . PASS END=170004686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 170004687 . G . PASS END=170004687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:28,0 chr1 170004688 . G . PASS END=170004688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:26,0 chr1 170004689 . C . PASS END=170004691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 170004692 . T . PASS END=170004692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr1 170004693 . T . PASS END=170004694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 170007431 . C . PASS END=170007564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,117,1755:0,121,255:40,0 chr1 170007565 . T . PASS END=170007565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:66:49:0,66,1553:0,66,255:36,0 chr1 170007566 . C . PASS END=170007572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,135,255:40,0 chr1 170008374 . C . PASS END=170008429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,169,255:40,0 chr1 170010818 . C . PASS END=170010902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:44:0,100,1684:0,100,255:40,0 chr1 170015853 . C . PASS END=170016007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:41:0,105,1575:0,117,255:40,0 chr1 170024446 . A . PASS END=170024577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:85:34:0,85,1180:0,85,255:40,0 chr1 170043577 . C . PASS END=170043580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 170043581 . T . PASS END=170043581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 170043582 . G . PASS END=170043586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 170043587 . A . PASS END=170043601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 170043602 . C . PASS END=170043608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 170054176 . C . PASS END=170054178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 170054179 . G . PASS END=170054179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 170054180 . T . PASS END=170054185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 170054186 . C . PASS END=170054186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:23,0 chr1 170054187 . C . PASS END=170054226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr1 170054227 . C . PASS END=170054227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 170054228 . C . PASS END=170054231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 170054232 . T . PASS END=170054232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 170054233 . C . PASS END=170054238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 170054239 . G . PASS END=170054239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 170054240 . C . PASS END=170054252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 170115249 . A . PASS END=170115391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1127:0,90,255:40,0 chr1 170115392 . A . PASS END=170115392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:30,0 chr1 170115393 . A . PASS END=170115394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:30,0 chr1 170115395 . T . PASS END=170115395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 170115396 . C . PASS END=170115399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 170115400 . T . PASS END=170115402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 170129659 . T . PASS END=170129674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1241:0,89,255:34,0 chr1 170129675 . A . PASS END=170129675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr1 170129676 . A . PASS END=170129804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:34:0,86,1210:0,86,255:40,0 chr1 170129805 . T . PASS END=170129805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1051:0,27,255:28,0 chr1 170129806 . C . PASS END=170129827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1119:0,80,255:32,0 chr1 170129828 . T . PASS END=170129834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 170135643 . G . PASS END=170135655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:25,0 chr1 170135656 . C . PASS END=170135668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:31,0 chr1 170135669 . C T, 49.73 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=2.983;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:17,15,0:0.469,0.000:32:12,12,0:5,3,0:48:85,0,50,537,608,1145:255,0,255:16,0:4.9731e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,12,3:12,5,11,4:170135669 chr1 170135670 . G . PASS END=170135692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1219:0,99,255:35,0 chr1 170135693 . A G, 49.74 PASS DP=40;MQ=249.29;MQRankSum=4.821;ReadPosRankSum=0.379;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,19,0:0.475,0.000:40:13,14,0:8,5,0:48:85,0,50,630,743,1373:255,0,255:18,0:4.9740e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,13,6:6,15,10,9:170135669 chr1 170135694 . G . PASS END=170135759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:39:0,97,1527:0,97,255:40,0 chr1 170135760 . T C, 48.83 PASS DP=43;MQ=250.00;MQRankSum=5.564;ReadPosRankSum=0.746;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,19,0:0.442,0.000:43:13,12,0:11,7,0:47:84,0,50,675,854,1529:255,0,255:21,0:4.8827e+01,7.8694e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,15,4:13,11,10,9 chr1 170135761 . C . PASS END=170135827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1350:0,81,255:39,0 chr1 170135828 . C T, 45.36 PASS DP=42;MQ=250.00;MQRankSum=5.374;ReadPosRankSum=1.800;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,16,0:0.381,0.000:42:16,10,0:10,6,0:45:80,0,50,564,863,1427:255,0,255:21,0:4.5358e+01,1.4833e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,12,5,11:12,14,7,9 chr1 170135829 . A . PASS END=170135852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1178:0,83,255:32,0 chr1 170135853 . T . PASS END=170135853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr1 170135854 . T . PASS END=170135859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 170135860 . G . PASS END=170135865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 170135866 . A . PASS END=170135866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 170135867 . T . PASS END=170135892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:24:0,67,878:0,67,255:26,0 chr1 170136627 . G . PASS END=170136629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 170136630 . A . PASS END=170136630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 170136631 . C . PASS END=170136663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,709:0,60,255:26,0 chr1 170136664 . C . PASS END=170136664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 170136665 . C . PASS END=170136667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 170136668 . T . PASS END=170136668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:24,0 chr1 170136669 . G . PASS END=170136694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,875:0,81,255:28,0 chr1 170136695 . A . PASS END=170136697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 170136698 . A . PASS END=170136698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 170136699 . T . PASS END=170136705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 170136706 . G . PASS END=170136749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1172:0,83,255:36,0 chr1 170136750 . A . PASS END=170136786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,98,255:36,0 chr1 170136787 . C T, 48.98 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=2.081;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:7,11,0:12,4,0:48:84,0,50,528,679,1208:255,0,255:17,0:4.8978e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,8,7:9,10,8,7 chr1 170136788 . C . PASS END=170136815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1164:0,83,255:35,0 chr1 170136816 . T . PASS END=170136816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr1 170136817 . G . PASS END=170136824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1202:0,83,255:33,0 chr1 170136825 . A . PASS END=170136846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1189:0,83,255:33,0 chr1 170136847 . G . PASS END=170136865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:25:0,63,945:0,71,255:26,0 chr1 170136866 . A . PASS END=170136866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 170136867 . T . PASS END=170136872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 170136873 . C . PASS END=170136873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 170136874 . A . PASS END=170136874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 170136875 . C . PASS END=170136875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:19,0 chr1 170136876 . T . PASS END=170136876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 170136877 . G . PASS END=170136877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 170136878 . C . PASS END=170136880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:15,0 chr1 170136881 . A . PASS END=170136881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:13,0 chr1 170136882 . G . PASS END=170136883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:14,0 chr1 170136884 . G . PASS END=170136894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:14:0,39,585:0,42,255:13,0 chr1 170136895 . C . PASS END=170136898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 170501289 . G . PASS END=170501291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 170501292 . G . PASS END=170501304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:24,0 chr1 170501305 . G . PASS END=170501306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr1 170501307 . G . PASS END=170501307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 170501308 . T . PASS END=170501308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr1 170501309 . T . PASS END=170501309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 170501310 . G . PASS END=170501312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 170501313 . A . PASS END=170501313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 170501314 . G . PASS END=170501332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1050:0,84,255:30,0 chr1 170501333 . G . PASS END=170501334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 170501335 . C . PASS END=170501347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1105:0,93,255:33,0 chr1 170501348 . G . PASS END=170501384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1182:0,89,255:35,0 chr1 170501385 . A C, 149.33 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,19,0:0,15,0:99:187,102,0,1318,102,1318:255,102,0:0,0:1.4933e+02,9.9331e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,21:0,0,18,16 chr1 170501386 . T . PASS END=170501386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1294:0,102,255:34,0 chr1 170501387 . T . PASS END=170501387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1086:0,69,255:32,0 chr1 170501388 . C . PASS END=170501405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:34,0 chr1 170501406 . G . PASS END=170501422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:25:0,63,945:0,71,255:25,0 chr1 170501423 . A . PASS END=170501425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 170501438 . G . PASS END=170501438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 170502605 . G . PASS END=170502620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,809:0,62,255:26,0 chr1 170502621 . C . PASS END=170502786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1031:0,84,255:40,0 chr1 170502787 . T . PASS END=170502787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 170502788 . C . PASS END=170502789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 170502790 . A . PASS END=170502792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 170505451 . A . PASS END=170505507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,117,1574:0,119,255:40,0 chr1 170508351 . A . PASS END=170508357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:28:0,83,823:0,83,255:34,0 chr1 170508358 . T . PASS END=170508358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:32,0 chr1 170508359 . G . PASS END=170508388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:35:0,92,1199:0,92,255:39,0 chr1 170508389 . A . PASS END=170508389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1067:0,53,255:35,0 chr1 170508390 . G . PASS END=170508555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:42:0,90,1535:0,90,255:40,0 chr1 170508556 . C . PASS END=170508556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1764:0,79,255:40,0 chr1 170508557 . A . PASS END=170508708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:41:0,98,1466:0,98,255:40,0 chr1 170511630 . A . PASS END=170511630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 170511632 . G . PASS END=170511639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1205:0,102,255:34,0 chr1 170511640 . A . PASS END=170511640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr1 170511641 . A . PASS END=170511641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1311:0,105,255:35,0 chr1 170511642 . T . PASS END=170511733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:35:0,89,1205:0,89,255:40,0 chr1 170513837 . A . PASS END=170513837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 170513846 . A . PASS END=170513847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1224:0,102,255:34,0 chr1 170513848 . C . PASS END=170513848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 170513849 . C . PASS END=170513991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:33:0,83,1110:0,83,255:40,0 chr1 170521156 . G . PASS END=170521338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:40:0,109,1423:0,109,255:40,0 chr1 170521339 . T . PASS END=170521375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:46:0,117,1798:0,117,255:40,0 chr1 170521376 . G A, 176.42 PASS DP=44;MQ=249.36;FractionInformativeReads=0.977 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,21,0:0,22,0:126:214,129,0,1667,129,1667:255,135,0:0,0:1.7642e+02,1.2642e+02,0.0000e+00,4.5000e+02,1.6119e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,24:0,0,25,18 chr1 170521377 . A . PASS END=170521413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,101,1378:0,101,255:40,0 chr1 170521414 . A . PASS END=170521603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1800:0,128,255:40,1 chr1 170521705 . G . PASS END=170521705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 170521825 . G . PASS END=170521825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 170521952 . G . PASS END=170521952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 170522007 . A . PASS END=170522007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,111,1665:0,132,255:37,0 chr1 170522201 . A . PASS END=170522201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 170522215 . A . PASS END=170522215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 170522256 . T . PASS END=170522256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr1 170522374 . A . PASS END=170522374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,158,255:40,0 chr1 170522406 . T . PASS END=170522406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr1 170522421 . A . PASS END=170522421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 170522547 . A . PASS END=170522547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,240,255:40,0 chr1 170522583 . A . PASS END=170522583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 170522601 . A . PASS END=170522601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:93:0,120,1800:0,224,255:40,0 chr1 170522642 . A . PASS END=170522642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:91:0,120,1800:0,255,255:40,0 chr1 170522666 . T . PASS END=170522666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr1 170522730 . T . PASS END=170522730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 170522763 . G . PASS END=170522763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 170522908 . T . PASS END=170522908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 170633360 . A . PASS END=170633365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 170633366 . T . PASS END=170633366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 170633367 . C . PASS END=170633375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 170633376 . G . PASS END=170633404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr1 170633405 . G . PASS END=170633405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 170633406 . G . PASS END=170633455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,529:0,45,255:19,0 chr1 170633456 . A . PASS END=170633456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,558:0,24,255:17,0 chr1 170633457 . A . PASS END=170633495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,599:0,40,255:19,0 chr1 170633496 . G . PASS END=170633548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,62,255:24,0 chr1 170633549 . C . PASS END=170633549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 170633550 . T . PASS END=170633556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 170633557 . G . PASS END=170633558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 170633559 . C . PASS END=170633569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 170633570 . A . PASS END=170633580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 170633581 . C . PASS END=170633582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 170633583 . A . PASS END=170633600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:16:0,41,630:0,41,255:19,0 chr1 170688867 . A . PASS END=170688867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 170688868 . T . PASS END=170688870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 170688871 . C . PASS END=170688871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 170688872 . C . PASS END=170688876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,992:0,65,255:26,0 chr1 170688877 . G . PASS END=170688878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 170688879 . A . PASS END=170688879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 170688880 . C . PASS END=170688882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 170688883 . A . PASS END=170688883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 170688884 . G . PASS END=170688892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,989:0,81,255:29,0 chr1 170688893 . A . PASS END=170688893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr1 170688894 . A . PASS END=170688985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1057:0,80,255:37,0 chr1 170688986 . G . PASS END=170688986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:34,0 chr1 170688987 . C . PASS END=170689027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1205:0,91,255:36,0 chr1 170689028 . G . PASS END=170689042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 170695361 . G . PASS END=170695546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:37:0,103,1381:0,103,255:40,0 chr1 170699418 . A . PASS END=170699472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,114,1539:0,114,255:40,0 chr1 170705189 . C . PASS END=170705278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,994:0,81,255:40,0 chr1 170705279 . G . PASS END=170705279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:34,0 chr1 170705280 . G . PASS END=170705294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:36,0 chr1 170705295 . T . PASS END=170705303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 170705304 . A . PASS END=170705304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:22,0 chr1 170705305 . A . PASS END=170705305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 170705306 . C . PASS END=170705327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:16:0,42,630:0,48,255:18,0 chr1 170914698 . A . PASS END=170914722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:124,0:124:99:120:0,120,1800:0,255,255:40,0 chr1 170916668 . A . PASS END=170916683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,139,255:40,0 chr1 170916684 . T . PASS END=170916714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,124,255:40,0 chr1 170927602 . G . PASS END=170927621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,156,255:40,0 chr1 170927622 . A . PASS END=170927681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:98:58:0,98,1800:0,98,255:40,0 chr1 170928603 . C . PASS END=170928603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:26,0 chr1 170928604 . T . PASS END=170928609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,770:0,80,255:27,0 chr1 170928610 . G . PASS END=170928611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 170928612 . T . PASS END=170928612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 170928613 . C . PASS END=170928613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 170928614 . C . PASS END=170928616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,114,1451:0,114,255:39,0 chr1 170928617 . T . PASS END=170928617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1355:0,71,255:36,0 chr1 170928618 . A . PASS END=170928633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,106,1346:0,106,255:40,0 chr1 170928634 . C . PASS END=170928670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,111,1537:0,111,255:40,0 chr1 170928671 . T C, 46.11 PASS DP=51;MQ=249.62;MQRankSum=5.971;ReadPosRankSum=0.666;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,20,0:0.392,0.000:51:16,10,0:15,10,0:45:81,0,50,687,998,1685:255,0,255:31,0:4.6114e+01,1.2788e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,19,12,8:19,12,8,12 chr1 170928672 . T . PASS END=170928708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,117,1759:0,117,255:40,0 chr1 170928709 . A . PASS END=170928733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1303:0,97,255:40,0 chr1 170928734 . T . PASS END=170928738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1318:0,92,255:35,0 chr1 170931031 . A . PASS END=170931117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,163,255:40,0 chr1 170934292 . G . PASS END=170934396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,99,1429:0,99,255:40,0 chr1 170940889 . A . PASS END=170941024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:90:36:0,90,1350:0,90,255:40,0 chr1 170952563 . A . PASS END=170952675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,114,1544:0,116,255:40,0 chr1 170955702 . A . PASS END=170955851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:48:0,99,1485:0,119,255:40,0 chr1 170958996 . G . PASS END=170959144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:50:0,120,1800:0,150,255:40,0 chr1 170959690 . A . PASS END=170959772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:64:0,120,1800:0,148,255:40,0 chr1 170961305 . C . PASS END=170961470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:39:0,96,1520:0,96,255:40,0 chr1 170964530 . G . PASS END=170964672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:33:0,91,1440:0,91,255:40,0 chr1 170965648 . G . PASS END=170965785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,111,1558:0,116,255:40,0 chr1 170967295 . A . PASS END=170967297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:32,0 chr1 170967298 . T . PASS END=170967298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 170967299 . C . PASS END=170967541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:83:32:0,83,1180:0,83,255:40,0 chr1 170983258 . C . PASS END=170983394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:44:0,81,1215:0,132,255:40,1 chr1 170983395 . G . PASS END=170983395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:75:44:0,75,1125:0,132,255:25,0 chr1 170984151 . G . PASS END=170984159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,133,255:40,0 chr1 170985304 . A . PASS END=170985305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1056:0,87,255:31,0 chr1 170985306 . A . PASS END=170985306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr1 170985307 . G . PASS END=170985476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:29:0,80,1157:0,80,255:40,0 chr1 170985477 . T . PASS END=170985477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 170993536 . A . PASS END=170993688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,119,1800:0,119,255:40,0 chr1 170993790 . G . PASS END=170993906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:50:0,120,1800:0,140,255:40,0 chr1 170994459 . A . PASS END=170994561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,141,255:40,0 chr1 171031273 . G . PASS END=171031335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:101:0,120,1800:0,240,255:40,0 chr1 171033240 . T . PASS END=171033448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:88:35:0,88,1227:0,88,255:40,0 chr1 171033449 . A . PASS END=171033449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:31,0 chr1 171033450 . G . PASS END=171033463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,92,255:31,0 chr1 171033464 . A . PASS END=171033466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,90,255:21,0 chr1 171033467 . G . PASS END=171033481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:24:0,45,675:0,72,255:19,0 chr1 171061800 . A . PASS END=171061932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1203:0,86,255:40,0 chr1 171061944 . T . PASS END=171061944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 171070221 . A . PASS END=171070235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,180,255:40,0 chr1 171070276 . A . PASS END=171070347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,177,255:40,0 chr1 171072926 . G . PASS END=171073114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:40:0,99,1474:0,99,255:40,0 chr1 171076816 . A . PASS END=171076928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:92:35:0,92,1230:0,92,255:40,0 chr1 171076929 . T . PASS END=171076965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,114,1710:0,129,255:40,0 chr1 171076966 . G A, 178.49 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,17,0:0,27,0:128:216,131,0,1607,131,1607:255,132,0:0,0:1.7849e+02,1.2849e+02,0.0000e+00,4.5000e+02,1.6326e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,26:0,0,27,17 chr1 171076967 . A . PASS END=171076978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,108,1463:0,110,255:40,0 chr1 171076991 . T . PASS END=171076991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1227:0,91,255:34,0 chr1 171077220 . G . PASS END=171077226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 171077227 . C . PASS END=171077227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:30,0 chr1 171077228 . C . PASS END=171077235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:32,0 chr1 171077236 . A . PASS END=171077334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:33:0,82,1125:0,82,255:40,0 chr1 171077335 . C . PASS END=171077357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,92,255:35,0 chr1 171077358 . A . PASS END=171077362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:32:0,69,1035:0,96,255:25,0 chr1 171077375 . G . PASS END=171077375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 171079933 . T . PASS END=171079933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 171079939 . G . PASS END=171079949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1218:0,86,255:37,0 chr1 171079950 . T . PASS END=171079950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1260:0,75,255:37,0 chr1 171079951 . T . PASS END=171080115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1177:0,80,255:40,0 chr1 171080116 . T . PASS END=171080116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 171080117 . A . PASS END=171080117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 171080118 . T . PASS END=171080130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 171080131 . T . PASS END=171080131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:24,0 chr1 171080132 . T . PASS END=171080135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr1 171080136 . T . PASS END=171080138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:19,0 chr1 171083147 . A . PASS END=171083154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:25,0 chr1 171083155 . G . PASS END=171083173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1033:0,81,255:34,0 chr1 171083174 . C T, 50.00 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=1.341;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,19,0:0.543,0.000:35:5,12,0:11,7,0:48:85,0,49,679,564,1243:255,0,255:16,0:5.0000e+01,6.8081e-05,5.2438e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,2,12,7:5,11,9,10 chr1 171083175 . G . PASS END=171083175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1335:0,105,255:35,0 chr1 171083176 . A . PASS END=171083177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:34,0 chr1 171083178 . G . PASS END=171083241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:35:0,105,1313:0,105,255:40,0 chr1 171083242 . A G, 47.10 PASS DP=51;MQ=250.00;MQRankSum=6.019;ReadPosRankSum=0.775;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,21,0:0.412,0.000:51:14,12,0:16,9,0:46:82,0,50,681,1028,1709:255,0,255:30,0:4.7099e+01,1.0639e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,11,12,9:17,13,11,10 chr1 171083243 . G . PASS END=171083279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,132,255:40,0 chr1 171083280 . G . PASS END=171083430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:32:0,86,1263:0,86,255:40,0 chr1 171083431 . T . PASS END=171083431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr1 171083432 . T . PASS END=171083450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 171083451 . G . PASS END=171083471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:24:0,69,865:0,70,255:26,0 chr1 171083472 . C . PASS END=171083472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 171083473 . A . PASS END=171083495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 171083496 . A . PASS END=171083496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 171083497 . T . PASS END=171083498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 171083499 . A . PASS END=171083499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 171083500 . A . PASS END=171083502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 171085348 . G . PASS END=171085357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:87:0,120,1800:0,247,255:40,0 chr1 171085358 . T . PASS END=171085420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:88:0,120,1800:0,230,255:40,0 chr1 171086240 . G . PASS END=171086253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,856:0,69,255:26,0 chr1 171086254 . A . PASS END=171086265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,919:0,81,255:29,0 chr1 171086266 . C . PASS END=171086266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 171086267 . A . PASS END=171086269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 171086270 . T . PASS END=171086270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 171086271 . T . PASS END=171086275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr1 171086276 . T . PASS END=171086276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:28,0 chr1 171086277 . G . PASS END=171086284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:30,0 chr1 171086285 . G . PASS END=171086285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 171086286 . G . PASS END=171086291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1087:0,82,255:33,0 chr1 171086292 . C . PASS END=171086292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1027:0,66,255:28,0 chr1 171086293 . T . PASS END=171086295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:33:0,87,1071:0,91,255:32,0 chr1 171086296 . C . PASS END=171086297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1067:0,74,255:30,0 chr1 171086298 . T . PASS END=171086330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1124:0,83,255:33,0 chr1 171086331 . C . PASS END=171086331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:30,0 chr1 171086332 . T . PASS END=171086358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1046:0,85,255:32,0 chr1 171086359 . T . PASS END=171086359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 171086360 . G . PASS END=171086360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 171086361 . G . PASS END=171086361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 171086362 . A . PASS END=171086367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:28,0 chr1 171086368 . A . PASS END=171086368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:28,2 chr1 171086369 . T . PASS END=171086369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1116:0,30,255:28,2 chr1 171086370 . T . PASS END=171086370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:29,0 chr1 171086371 . T . PASS END=171086371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 171086372 . T . PASS END=171086373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 171086374 . G . PASS END=171086377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171086378 . T . PASS END=171086582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,989:0,90,255:40,0 chr1 171086586 . T . PASS END=171086586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr1 171086634 . G . PASS END=171086634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 171086843 . A . PASS END=171086843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 171086946 . C . PASS END=171086946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 171086956 . A . PASS END=171086956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 171154439 . A . PASS END=171154498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,111,1786:0,111,255:40,0 chr1 171154853 . A . PASS END=171154921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,120,1800:0,127,255:40,0 chr1 171154922 . G . PASS END=171154958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,114,1710:0,122,255:40,0 chr1 171154959 . A G, 49.82 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=3.713;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,21,0:0.477,0.000:44:11,11,0:12,10,0:48:85,0,50,751,807,1558:255,0,255:20,0:4.9820e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,17,8,13:12,11,16,5 chr1 171154960 . T . PASS END=171154961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr1 171154962 . T . PASS END=171154966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 171154967 . G . PASS END=171154975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1215:0,104,255:28,0 chr1 171154976 . A . PASS END=171154984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr1 171162474 . G . PASS END=171162662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:48:0,120,1800:0,137,255:40,0 chr1 171165788 . A . PASS END=171165789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 171165790 . A . PASS END=171165791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 171165792 . C . PASS END=171165792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:27,0 chr1 171165793 . T . PASS END=171165793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 171165794 . G . PASS END=171165794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 171165795 . T . PASS END=171165798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 171165799 . T . PASS END=171165799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,984:0,35,255:26,0 chr1 171165800 . A . PASS END=171165804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 171165805 . G . PASS END=171165805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 171165806 . A . PASS END=171165813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 171165814 . T . PASS END=171165815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1047:0,74,255:29,0 chr1 171165816 . C . PASS END=171165817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 171165818 . G . PASS END=171165819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr1 171165820 . T . PASS END=171165821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 171165822 . T . PASS END=171165822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:30,0 chr1 171165823 . C . PASS END=171165823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr1 171165824 . T . PASS END=171165824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 171165825 . C . PASS END=171165900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1077:0,93,255:40,0 chr1 171165901 . T . PASS END=171165901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:32,0 chr1 171165902 . T . PASS END=171165910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1271:0,89,255:33,0 chr1 171165911 . C . PASS END=171165940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,878:0,61,255:26,0 chr1 171165941 . T . PASS END=171165950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 171168485 . G . PASS END=171168507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,134,255:40,0 chr1 171168508 . T . PASS END=171168544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,149,255:40,0 chr1 171168545 . T C, 49.99 PASS DP=67;MQ=249.96;MQRankSum=6.603;ReadPosRankSum=5.336;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,33,0:0.493,0.000:67:20,18,0:14,15,0:48:85,0,50,1170,1208,2378:255,0,255:34,0:4.9985e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,18,16,17:18,16,19,14 chr1 171168546 . T . PASS END=171168583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,160,255:40,0 chr1 171168584 . C T, 49.54 PASS DP=68;MQ=249.96;MQRankSum=7.056;ReadPosRankSum=3.583;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,31,0:0.456,0.000:68:21,17,0:16,14,0:47:84,0,47,184,184,184:255,0,255:32,0:4.9537e+01,9.1637e-05,5.0000e+01,1.8431e+02,2.1908e+02,1.8732e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,27,14,17:20,17,20,11 chr1 171168585 . A G, 1072.18 PASS DP=67;MQ=249.96;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,37,0:0,30,0:450:1110,1025,0,1210,1210,1210:255,201,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,23,44:0,0,39,28 chr1 171168586 . G . PASS END=171168627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:41:0,87,1305:0,107,255:40,0 chr1 171173004 . G . PASS END=171173008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 171173009 . T . PASS END=171173009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 171173010 . A . PASS END=171173013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1019:0,54,255:30,0 chr1 171173014 . G . PASS END=171173019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 171173020 . G . PASS END=171173021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr1 171173022 . C . PASS END=171173022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 171173023 . A . PASS END=171173026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1196:0,85,255:35,0 chr1 171173027 . C . PASS END=171173027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:36,0 chr1 171173028 . A . PASS END=171173203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:37:0,94,1252:0,94,255:40,0 chr1 171174418 . A . PASS END=171174418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,975:0,76,255:30,0 chr1 171174419 . T . PASS END=171174419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1074:0,57,255:31,0 chr1 171174420 . A . PASS END=171174773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:33:0,82,1089:0,82,255:40,0 chr1 171176857 . G . PASS END=171176929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,160,255:40,0 chr1 171177933 . G . PASS END=171177952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:26,0 chr1 171177953 . A . PASS END=171178010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1003:0,81,255:37,0 chr1 171178011 . G . PASS END=171178011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:34,0 chr1 171178012 . A . PASS END=171178114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:37:0,92,1218:0,92,255:40,0 chr1 171178115 . A . PASS END=171178151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:47:0,86,1607:0,86,255:40,0 chr1 171178152 . A G, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=2.845;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,26,0:0.542,0.000:48:12,13,0:10,13,0:48:85,0,49,930,726,1656:255,0,255:20,0:5.0000e+01,6.8598e-05,5.2360e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,11,15:13,9,16,10 chr1 171178153 . C . PASS END=171178187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:40:0,86,1367:0,86,255:40,0 chr1 171178188 . G . PASS END=171178188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1435:0,74,255:40,0 chr1 171178189 . A . PASS END=171178189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 171178190 . A . PASS END=171178263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:34:0,85,1121:0,85,255:40,0 chr1 171178264 . T . PASS END=171178264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1194:0,71,255:32,0 chr1 171178265 . G . PASS END=171178265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 171178266 . C . PASS END=171178266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1209:0,72,255:32,0 chr1 171178267 . C . PASS END=171178275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:33,0 chr1 171178276 . T . PASS END=171178279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:29:0,63,945:0,71,255:21,0 chr1 171178280 . C . PASS END=171178284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,855:0,54,255:19,0 chr1 171217691 . C . PASS END=171217691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 171227215 . A . PASS END=171227339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1274:0,98,255:40,0 chr1 171227340 . G . PASS END=171227342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 171227343 . G . PASS END=171227343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 171227344 . C . PASS END=171227358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr1 171236682 . G . PASS END=171236870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:95:37:0,95,1309:0,95,255:40,0 chr1 171239716 . A . PASS END=171239736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:30:0,86,1133:0,86,255:40,0 chr1 171239737 . C . PASS END=171239775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1365:0,81,255:40,0 chr1 171244485 . A . PASS END=171244486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 171244487 . C . PASS END=171244488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,962:0,67,255:28,0 chr1 171244489 . A . PASS END=171244619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:29:0,83,1200:0,83,255:40,0 chr1 171244620 . C . PASS END=171244620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 171244621 . C . PASS END=171244624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 171244625 . T . PASS END=171244625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr1 171244626 . T . PASS END=171244627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 171244628 . G . PASS END=171244647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr1 171247868 . G . PASS END=171248010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:37:0,90,1350:0,104,255:40,0 chr1 171249925 . G . PASS END=171249937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 171249938 . C . PASS END=171250124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:28:0,80,1041:0,80,255:40,0 chr1 171251117 . G . PASS END=171251423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:32:0,81,1202:0,83,255:40,0 chr1 171251424 . A . PASS END=171251436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr1 171251437 . A . PASS END=171251437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 171251438 . A . PASS END=171251438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 171251439 . A . PASS END=171251439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:22,0 chr1 171251440 . C . PASS END=171251449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 171251450 . G . PASS END=171251472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:17:0,51,659:0,51,255:19,0 chr1 171252283 . G . PASS END=171252353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:51:0,118,1800:0,118,255:40,0 chr1 171252354 . T . PASS END=171252355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:55:0,110,1800:0,110,255:40,0 chr1 171253062 . A . PASS END=171253062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr1 171254341 . G . PASS END=171254573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1196:0,83,255:40,0 chr1 171254574 . A . PASS END=171254574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1358:0,79,255:37,0 chr1 171254575 . G . PASS END=171254683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:40:0,96,1430:0,96,255:40,0 chr1 171254890 . C . PASS END=171254890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 171288965 . A . PASS END=171288970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:31,0 chr1 171288971 . A . PASS END=171288971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 171288972 . A . PASS END=171289090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:32:0,83,1164:0,83,255:40,0 chr1 171289091 . T . PASS END=171289091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1202:0,70,255:35,0 chr1 171289092 . T . PASS END=171289096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:93:40:0,93,1395:0,104,255:37,0 chr1 171292143 . G . PASS END=171292331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:37:0,84,1374:0,84,255:40,0 chr1 171293277 . A . PASS END=171293439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1074:0,93,255:40,0 chr1 171300779 . G . PASS END=171300921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,111,1514:0,116,255:40,0 chr1 171301848 . G . PASS END=171301857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr1 171301858 . G . PASS END=171302042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:34:0,81,1128:0,86,255:40,0 chr1 171302043 . A . PASS END=171302047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:33:0,72,1080:0,74,255:25,0 chr1 171303550 . G . PASS END=171303890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1156:0,83,255:40,0 chr1 171303891 . G . PASS END=171303902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:26,0 chr1 171303905 . A . PASS END=171303905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 171306495 . G . PASS END=171306564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,161,255:40,0 chr1 171308365 . C . PASS END=171308524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:96:38:0,96,1374:0,96,255:40,0 chr1 171310552 . G . PASS END=171310594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 171310595 . G . PASS END=171310599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 171310600 . C . PASS END=171310609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,74,255:26,0 chr1 171310610 . A . PASS END=171310610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 171310611 . T . PASS END=171310611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:27,0 chr1 171310612 . C . PASS END=171310627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 171310628 . A . PASS END=171310628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 171310629 . C . PASS END=171310635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1169:0,80,255:31,0 chr1 171310636 . C . PASS END=171310636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 171310637 . A . PASS END=171310639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 171310640 . A . PASS END=171310640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 171310641 . T . PASS END=171310642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 171310643 . C . PASS END=171310662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,984:0,65,255:26,0 chr1 171310663 . T . PASS END=171310663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 171310664 . C . PASS END=171310674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,984:0,67,255:26,0 chr1 171310675 . T . PASS END=171310679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 171310680 . A . PASS END=171310680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 171310681 . A . PASS END=171310687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 171310688 . T . PASS END=171310695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1069:0,71,255:26,0 chr1 171310696 . A . PASS END=171310978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:31:0,81,1141:0,82,255:40,0 chr1 171481228 . A . PASS END=171481339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:82:40:0,82,1490:0,82,255:40,0 chr1 171482134 . T . PASS END=171482311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:43:0,120,1800:0,129,255:40,0 chr1 171483675 . A . PASS END=171483675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 171483676 . A . PASS END=171483676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 171483677 . C . PASS END=171483685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 171483686 . T . PASS END=171483716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1116:0,83,255:40,0 chr1 171483717 . A C, 175.02 PASS DP=43;MQ=249.07;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,18,0:0,25,0:125:213,128,0,313,313,313:255,129,0:0,0:1.7502e+02,1.2502e+02,0.0000e+00,3.0979e+02,3.4456e+02,3.1280e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,21:0,0,23,20 chr1 171483718 . G . PASS END=171483754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,113,1590:0,113,255:40,0 chr1 171483755 . C . PASS END=171483784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,128,255:40,0 chr1 171484873 . G . PASS END=171484873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 171484874 . A . PASS END=171484876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 171484877 . C . PASS END=171484877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:28,0 chr1 171484878 . C . PASS END=171484895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1097:0,82,255:33,0 chr1 171484896 . C . PASS END=171484896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:31,0 chr1 171484897 . A . PASS END=171484902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1170:0,83,255:35,0 chr1 171484903 . A . PASS END=171484904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1028:0,66,255:34,0 chr1 171484905 . T . PASS END=171484923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:35:0,81,1122:0,81,255:40,0 chr1 171484924 . C . PASS END=171484924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1527:0,77,255:40,0 chr1 171484925 . T . PASS END=171484949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1462:0,112,255:40,0 chr1 171484950 . G . PASS END=171484950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:51:43:0,51,1442:0,51,255:38,0 chr1 171484951 . A . PASS END=171484953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,113,1537:0,113,255:40,0 chr1 171484954 . C . PASS END=171484954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1465:0,79,255:37,0 chr1 171484955 . A . PASS END=171484994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,81,255:39,0 chr1 171484995 . C . PASS END=171484998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1000:0,70,255:25,0 chr1 171486730 . A . PASS END=171486737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:26,0 chr1 171486738 . T . PASS END=171486940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1111:0,82,255:40,0 chr1 171486941 . G . PASS END=171486949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,68,255:23,0 chr1 171486950 . T . PASS END=171486953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,70,255:18,0 chr1 171491316 . A . PASS END=171491398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:96:37:0,96,1347:0,99,255:40,0 chr1 171492360 . A . PASS END=171492360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 171492361 . G . PASS END=171492364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 171492365 . T . PASS END=171492366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 171492367 . C . PASS END=171492493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1185:0,80,255:40,0 chr1 171492574 . G . PASS END=171492661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,120,1800:0,144,255:40,0 chr1 171493960 . T . PASS END=171494104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,110,1612:0,110,255:40,0 chr1 171496930 . G . PASS END=171496932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr1 171496933 . C . PASS END=171496983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,195,255:40,0 chr1 171501482 . C . PASS END=171501494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,978:0,72,255:26,0 chr1 171501495 . A . PASS END=171501495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:25,0 chr1 171501496 . T . PASS END=171501497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr1 171501498 . G . PASS END=171501506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 171501507 . T . PASS END=171501507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:28,0 chr1 171501508 . A . PASS END=171501561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:33:0,92,1213:0,92,255:38,0 chr1 171501562 . A . PASS END=171501562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1103:0,61,255:32,0 chr1 171501563 . A . PASS END=171501588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1205:0,89,255:34,0 chr1 171501589 . A . PASS END=171501589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:32,0 chr1 171501590 . T . PASS END=171502100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:34:0,84,1188:0,84,255:40,2 chr1 171504567 . A . PASS END=171504736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:33:0,81,1156:0,81,255:40,0 chr1 171505168 . G . PASS END=171505186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1170:0,83,255:33,0 chr1 171505187 . A . PASS END=171505187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:31,0 chr1 171505188 . G . PASS END=171505193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:33,0 chr1 171505194 . G . PASS END=171505194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr1 171505195 . C . PASS END=171505383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:28:0,81,1055:0,84,255:40,0 chr1 171505384 . A . PASS END=171505393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 171505394 . T . PASS END=171505403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:23:0,51,765:0,69,255:19,0 chr1 171505404 . A . PASS END=171505404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 171505405 . C . PASS END=171505415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:15,0 chr1 171505416 . T . PASS END=171505417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 171506402 . G . PASS END=171506402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 171506403 . A . PASS END=171506403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 171506404 . A . PASS END=171506410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,861:0,66,255:25,0 chr1 171506411 . C . PASS END=171506414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 171506415 . T . PASS END=171506415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 171506416 . A . PASS END=171506450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:29:0,87,1056:0,87,255:38,0 chr1 171506451 . A . PASS END=171506451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 171506452 . C . PASS END=171506493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:39:0,95,1439:0,95,255:40,0 chr1 171506494 . A . PASS END=171506494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:22:46:0,22,1277:0,22,255:37,0 chr1 171506495 . G . PASS END=171506593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1260:0,84,255:40,0 chr1 171506594 . A . PASS END=171506599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,93,255:25,0 chr1 171506600 . C . PASS END=171506609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:24:0,54,810:0,72,255:19,0 chr1 171506610 . A . PASS END=171506612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 171509110 . G . PASS END=171509114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 171509115 . A . PASS END=171509120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:25,0 chr1 171509121 . C . PASS END=171509185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1008:0,81,255:35,0 chr1 171509186 . A . PASS END=171509186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:29,0 chr1 171509187 . A . PASS END=171509289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1172:0,83,255:39,0 chr1 171509290 . T . PASS END=171509326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1250:0,91,255:37,0 chr1 171509327 . G A, 159.82 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,17,0:0,21,0:110:198,113,0,298,298,298:255,114,0:0,0:1.5982e+02,1.0982e+02,0.0000e+00,2.9459e+02,3.2936e+02,2.9760e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,12,26:0,0,15,23 chr1 171509328 . C . PASS END=171509336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:37:0,87,1305:0,98,255:30,0 chr1 171509337 . A . PASS END=171509337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1279:0,64,255:29,0 chr1 171509338 . G . PASS END=171509364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1141:0,82,255:34,0 chr1 171509365 . G . PASS END=171509443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1255:0,89,255:36,0 chr1 171509444 . G . PASS END=171509444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:29,0 chr1 171509445 . G . PASS END=171509466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,86,255:31,0 chr1 171509467 . A . PASS END=171509468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 171509469 . G . PASS END=171509470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 171509471 . A . PASS END=171509471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:29,0 chr1 171509472 . T . PASS END=171509472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 171509473 . T . PASS END=171509473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:29,0 chr1 171509474 . G . PASS END=171510142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:31:0,80,1125:0,80,255:40,0 chr1 171510143 . G . LowGQ END=171510143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,9:44:0:44:0,0,917:40,0,255:34,0 chr1 171510144 . A . PASS END=171510145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:43:0,99,1179:0,99,255:40,0 chr1 171510146 . T . PASS END=171510146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:78:43:0,78,1115:0,78,255:38,0 chr1 171510147 . G . PASS END=171510147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:32:43:0,32,1158:0,32,255:36,0 chr1 171510148 . G . PASS END=171510642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:32:0,84,1260:0,85,255:40,0 chr1 171510643 . A . PASS END=171510673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 171510674 . C . PASS END=171510680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 171510681 . G . PASS END=171510722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,834:0,75,255:26,0 chr1 171510723 . G . PASS END=171510733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr1 171510734 . T . PASS END=171510734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 171510735 . G . PASS END=171510797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1094:0,87,255:39,0 chr1 171510798 . A . PASS END=171510798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr1 171510799 . G . PASS END=171511001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:38:0,87,1320:0,87,255:40,0 chr1 171511002 . T . PASS END=171511038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,113,1800:0,113,255:40,0 chr1 171511039 . C G, 180.55 PASS DP=49;MQ=247.11;MQRankSum=1.588;ReadPosRankSum=0.505;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,47,0:0.979,0.000:48:0,20,0:1,27,0:131:218,134,0,1749,141,1756:255,117,0:2,0:1.8055e+02,1.3055e+02,0.0000e+00,4.5000e+02,1.7231e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,28,19:0,1,21,26 chr1 171511040 . G . PASS END=171511076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,104,1560:0,104,255:40,0 chr1 171511077 . C . PASS END=171511147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,113,1710:0,113,255:40,0 chr1 171511148 . G . PASS END=171511148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:29:54:0,29,1589:0,29,255:40,5 chr1 171511149 . A . PASS END=171511149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:61:55:0,61,1775:0,61,255:40,1 chr1 171511150 . A . PASS END=171511198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,107,1625:0,107,255:40,0 chr1 171511199 . A . PASS END=171511199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1375:0,77,255:40,0 chr1 171511200 . A . PASS END=171511298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1241:0,81,255:40,0 chr1 171511299 . C . PASS END=171511299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:32,0 chr1 171511300 . A . PASS END=171511306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:33,0 chr1 171511307 . A . PASS END=171511307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1053:0,27,255:28,0 chr1 171511308 . A . PASS END=171511333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1141:0,82,255:31,0 chr1 171511334 . A . PASS END=171511334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 171511335 . G . PASS END=171511335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 171511336 . A . PASS END=171511339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:29:0,76,1048:0,76,255:26,0 chr1 171511340 . G . PASS END=171511340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:24,0 chr1 171511341 . G . PASS END=171511346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 171511347 . C . PASS END=171511347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:23,0 chr1 171511348 . A . PASS END=171511357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:24,0 chr1 171511358 . G . PASS END=171511358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 171511359 . G . PASS END=171511361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 171511362 . A . PASS END=171511363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr1 171511364 . A . PASS END=171511365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 171511366 . A . PASS END=171511368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,810:0,58,255:18,0 chr1 171514618 . G . PASS END=171514693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:29:0,81,1215:0,87,255:40,0 chr1 171514694 . G . PASS END=171514730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:73:0,120,1800:0,219,255:40,0 chr1 171514731 . C G, 323.43 PASS DP=92;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,92,0:1.000,0.000:92:0,49,0:0,43,0:273:361,276,0,3530,276,3530:255,255,0:0,0:3.2343e+02,2.7343e+02,0.0000e+00,4.4853e+02,3.0820e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,55,37:0,0,44,48 chr1 171514732 . T . PASS END=171514768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:90:0,120,1800:0,231,255:40,0 chr1 171514769 . A . PASS END=171514805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:61:0,120,1800:0,183,255:40,0 chr1 171514806 . T . PASS END=171514823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:47:0,84,1260:0,140,255:40,0 chr1 171514824 . C . PASS END=171514826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:66:45:0,66,990:0,135,255:23,0 chr1 171519225 . G . PASS END=171519379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:90:44:0,90,1350:0,109,255:40,0 chr1 171526379 . G . PASS END=171526380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 171526381 . C . PASS END=171526381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 171526382 . T . PASS END=171526532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:28:0,84,1022:0,84,255:40,0 chr1 171526533 . C . PASS END=171526569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,162,255:40,0 chr1 171526570 . G A, 236.14 PASS DP=64;MQ=250.00;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,35,0:0,28,0:186:274,189,0,2393,189,2393:255,192,0:0,0:2.3615e+02,1.8615e+02,0.0000e+00,4.5000e+02,2.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,33:0,0,38,25 chr1 171526571 . G . PASS END=171526607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,128,255:40,0 chr1 171526608 . C . PASS END=171526810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:36:0,84,1350:0,84,255:40,0 chr1 171526811 . T . PASS END=171526811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:29,0 chr1 171526812 . C . PASS END=171526854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1140:0,83,255:33,0 chr1 171526855 . A . PASS END=171526855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 171526856 . G . PASS END=171526881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 171526882 . G . PASS END=171526898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:27,0 chr1 171526899 . C . PASS END=171526900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171526901 . T . PASS END=171526902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171526903 . C . PASS END=171526904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 171526905 . C . PASS END=171526905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 171526906 . A . PASS END=171526911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 171526912 . C . PASS END=171526914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1030:0,68,255:24,0 chr1 171526915 . A . PASS END=171526917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 171526918 . C . PASS END=171526918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:26,0 chr1 171526919 . A . PASS END=171526940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:32,0 chr1 171526941 . C . PASS END=171526941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1023:0,27,255:29,0 chr1 171526942 . C . PASS END=171526953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr1 171526954 . T . PASS END=171526954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 171526955 . G . PASS END=171526969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 171526970 . G . PASS END=171526970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1021:0,57,255:27,0 chr1 171526971 . C . PASS END=171526971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 171526972 . C . PASS END=171526986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:28,0 chr1 171526987 . A . PASS END=171526987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 171526988 . G . PASS END=171526994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,881:0,67,255:25,0 chr1 171526995 . C . PASS END=171526995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,848:0,37,255:23,0 chr1 171526996 . C . PASS END=171526999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,942:0,70,255:26,0 chr1 171527000 . G . PASS END=171527001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:56:30:0,56,806:0,56,255:28,0 chr1 171527002 . C . PASS END=171527004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1141:0,80,255:29,0 chr1 171527005 . T . LowGQ END=171527005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,711:7,0,255:23,0 chr1 171527006 . A . PASS END=171527006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1095:0,82,255:29,0 chr1 171527007 . C . PASS END=171527007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,898:0,38,255:29,0 chr1 171527008 . C . PASS END=171527010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr1 171527011 . A . PASS END=171527011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:51:33:0,51,944:0,51,255:30,0 chr1 171527012 . G . PASS END=171527012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:21:34:0,21,873:0,21,255:29,0 chr1 171527013 . T . PASS END=171527015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1053:0,88,255:34,0 chr1 171527016 . C . PASS END=171527016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1012:0,68,255:30,0 chr1 171527017 . A . PASS END=171527017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 171527018 . G . LowGQ END=171527018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,856:1,0,255:27,0 chr1 171527019 . C . PASS END=171527025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1309:0,84,255:36,0 chr1 171527026 . T . LowGQ END=171527027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:0:38:0,0,889:0,0,255:29,0 chr1 171527028 . C . PASS END=171527028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1344:0,100,255:34,0 chr1 171527029 . T . LowGQ END=171527029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:0:38:0,0,942:6,0,255:31,0 chr1 171527030 . G . PASS END=171527037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:39:0,93,1216:0,93,255:39,0 chr1 171527038 . T . PASS END=171527038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1297:0,54,255:37,0 chr1 171527039 . G . PASS END=171527039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1327:0,76,255:39,0 chr1 171527040 . C . PASS END=171527044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1612:0,102,255:40,0 chr1 171527045 . G . PASS END=171527045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1535:0,77,255:40,0 chr1 171527046 . C . PASS END=171527216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:87:37:0,87,1304:0,87,255:40,0 chr1 171527217 . T . PASS END=171527217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:32,0 chr1 171527218 . G . PASS END=171527233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1194:0,86,255:34,0 chr1 171527234 . G . PASS END=171527234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1160:0,71,255:27,0 chr1 171527235 . A . PASS END=171527235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 171527236 . T . PASS END=171527236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1177:0,55,255:26,0 chr1 171527237 . A . PASS END=171527244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:29,0 chr1 171527245 . G . PASS END=171527252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,74,255:26,0 chr1 171527253 . C . PASS END=171527260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:23:0,45,675:0,69,255:18,0 chr1 171527261 . C . PASS END=171527263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,43,255:13,0 chr1 171527264 . A . PASS END=171527266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:14,0 chr1 171527267 . G . PASS END=171527267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,443:0,15,255:12,0 chr1 171527268 . A . PASS END=171527268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 171527269 . T . PASS END=171527269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 171527270 . A . PASS END=171527272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:14,0 chr1 171527273 . T . PASS END=171527273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 171527274 . C . PASS END=171527277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 171527278 . G . PASS END=171527278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:11,0 chr1 171527279 . A . PASS END=171527280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 171527281 . A . PASS END=171527281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 171527282 . T . PASS END=171527282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 171530157 . T . PASS END=171530242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,120,1800:0,129,255:40,0 chr1 171535372 . G . PASS END=171535560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:32:0,81,1202:0,83,255:40,0 chr1 171535731 . C . PASS END=171535978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:81:31:0,81,1215:0,91,255:40,0 chr1 171535979 . A . PASS END=171535982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,73,255:24,0 chr1 171537386 . G . PASS END=171537478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:98:43:0,98,1521:0,98,255:40,0 chr1 171540459 . G . PASS END=171540560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1023:0,81,255:40,0 chr1 171544066 . A . PASS END=171544231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:33:0,98,1199:0,98,255:40,0 chr1 171544232 . C . PASS END=171544232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 171544233 . T . PASS END=171544244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1263:0,89,255:34,0 chr1 171544245 . C . PASS END=171544250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:34:0,60,900:0,102,255:22,0 chr1 171544251 . T . PASS END=171544263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,44,255:19,0 chr1 171544264 . T . PASS END=171544267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 171546573 . G . PASS END=171546575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 171546576 . C . PASS END=171546762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:29:0,81,1215:0,85,255:40,0 chr1 171546763 . T . PASS END=171546770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:30:0,75,1125:0,90,255:25,0 chr1 171546771 . C . PASS END=171546773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 171546774 . C . PASS END=171546776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 171548493 . C . PASS END=171548597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:42:0,81,1215:0,101,255:40,0 chr1 171548598 . T . PASS END=171548605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:36:0,72,1080:0,91,255:25,0 chr1 171548967 . C . PASS END=171548971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr1 171548972 . T . PASS END=171548972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 171548973 . T . PASS END=171548976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 171548977 . T . PASS END=171548977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 171548978 . T . PASS END=171548987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:24,0 chr1 171548988 . C . PASS END=171548988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 171548989 . C . PASS END=171549005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,803:0,61,255:26,0 chr1 171549006 . C . PASS END=171549012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 171549013 . A . PASS END=171549013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 171549014 . A . PASS END=171549077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1126:0,80,255:34,0 chr1 171549078 . T . PASS END=171549092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1053:0,71,255:26,0 chr1 171549093 . C . PASS END=171549093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 171549094 . A . PASS END=171549099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:24,0 chr1 171549100 . A . PASS END=171549100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 171549101 . T . PASS END=171549103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 171553095 . A . PASS END=171553104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr1 171553105 . G . PASS END=171553311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,1066:0,84,255:40,0 chr1 171553312 . A . PASS END=171553326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr1 171553558 . G . PASS END=171553680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:83:30:0,83,1136:0,83,255:40,0 chr1 171556142 . G . PASS END=171556164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,105,1575:0,120,255:40,0 chr1 171556165 . G C, 202.57 PASS DP=53;MQ=250.00;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,27,0:0,25,0:153:240,156,0,1950,156,1950:255,159,0:0,0:2.0257e+02,1.5257e+02,0.0000e+00,4.5000e+02,1.8734e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,25:0,0,28,24 chr1 171556166 . C . PASS END=171556202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,146,255:40,0 chr1 171556203 . C . PASS END=171556347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:34:0,90,1350:0,99,255:40,0 chr1 171556348 . A . PASS END=171556348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:29,0 chr1 171556349 . A . PASS END=171556357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:30,0 chr1 171556358 . A . PASS END=171556359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:27,0 chr1 171556360 . A . PASS END=171556360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 171556787 . A . PASS END=171556890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,104,1433:0,104,255:40,0 chr1 171557518 . G . PASS END=171557644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,99,1485:0,103,255:40,0 chr1 171558508 . A . PASS END=171558508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr1 171558509 . T . PASS END=171558509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:24,0 chr1 171558510 . T . PASS END=171558510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,808:0,20,255:23,1 chr1 171558511 . C . PASS END=171558513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,726:0,47,255:24,0 chr1 171558514 . T . LowGQ END=171558514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,623:53,0,255:21,0 chr1 171558515 . C . PASS END=171558515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,770:0,17,255:24,0 chr1 171558516 . C T, 118.77 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,10,0:0,14,0:69:157,72,0,890,72,890:255,81,0:0,0:1.1877e+02,6.8768e+01,5.1772e-07,4.5000e+02,1.0354e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,16:0,0,14,10 chr1 171558517 . C . PASS END=171558518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,909:0,64,255:25,0 chr1 171558519 . G . PASS END=171558519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:4:31:0,4,884:0,4,255:26,0 chr1 171558520 . C . PASS END=171558520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 171558521 . C . PASS END=171558521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1024:0,24,255:28,0 chr1 171558522 . T . LowGQ END=171558522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:0:31:0,0,953:1,0,255:26,0 chr1 171558523 . A . PASS END=171558524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr1 171558525 . C . PASS END=171558526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1054:0,63,255:30,0 chr1 171558527 . T . PASS END=171558527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,1006:0,43,255:28,0 chr1 171558528 . G . PASS END=171558528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 171558529 . G . PASS END=171558530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,997:0,54,255:30,0 chr1 171558531 . C . PASS END=171558531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 171558532 . C . PASS END=171558533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 171558534 . T . PASS END=171558534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:5:31:0,5,898:0,5,255:27,0 chr1 171558535 . C . PASS END=171558535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 171558536 . C . PASS END=171558536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 171558537 . A . PASS END=171558539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1000:0,60,255:28,0 chr1 171558540 . G . PASS END=171558541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:30,0 chr1 171558542 . T . PASS END=171558542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:30,0 chr1 171558543 . A . PASS END=171558543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 171558544 . A . PASS END=171558546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1004:0,63,255:31,0 chr1 171558547 . G . PASS END=171558547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:30,0 chr1 171558548 . C . PASS END=171558551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 171558552 . A . PASS END=171558552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 171558553 . C . PASS END=171558553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:31,0 chr1 171558554 . A . PASS END=171558554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 171558555 . T . PASS END=171558555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:44:35:0,44,1188:0,44,255:33,0 chr1 171558556 . A . PASS END=171558557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 171558558 . T . PASS END=171558558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1218:0,31,255:34,0 chr1 171558559 . A . PASS END=171558569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1379:0,95,255:36,0 chr1 171558570 . A . PASS END=171558570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 171558571 . G . PASS END=171558628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,87,255:39,0 chr1 171558629 . C . PASS END=171558670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,781:0,75,255:26,0 chr1 171558671 . G . PASS END=171558680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:28,0 chr1 171558681 . A . PASS END=171558681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 171558682 . T . PASS END=171558682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 171558683 . C . PASS END=171558704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 171558705 . T . PASS END=171558715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 171558716 . C . PASS END=171558716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 171558717 . T . PASS END=171558744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 171560291 . A . PASS END=171560343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,114,1756:0,114,255:40,0 chr1 171560726 . G . PASS END=171560729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 171560730 . A . PASS END=171560730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 171560731 . G . PASS END=171560732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 171560733 . A . PASS END=171560733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 171560734 . G . PASS END=171560735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 171560736 . G . PASS END=171560745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr1 171560746 . T . PASS END=171560746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 171560747 . C . PASS END=171560747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 171560748 . T . PASS END=171560748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 171560749 . T . PASS END=171560768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:32,0 chr1 171560769 . T . PASS END=171560769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:33,0 chr1 171560770 . C . PASS END=171560943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:34:0,85,1055:0,85,255:40,0 chr1 171560944 . A . PASS END=171560944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1274:0,62,255:34,0 chr1 171560945 . A . PASS END=171560949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1363:0,84,255:37,0 chr1 171560950 . A . PASS END=171560950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1099:0,45,255:27,0 chr1 171560951 . C . PASS END=171560957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:37:0,84,1260:0,94,255:30,0 chr1 171560958 . C . PASS END=171560958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:27,0 chr1 171560959 . G . PASS END=171560959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 171560960 . A . PASS END=171560960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 171560961 . T . PASS END=171560963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 171560964 . A . PASS END=171560965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr1 171560966 . A . PASS END=171560966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,990:0,57,255:26,0 chr1 171560967 . C . PASS END=171560968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 171560969 . G . PASS END=171560969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 171560970 . A . PASS END=171560970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,874:0,45,255:27,0 chr1 171560971 . A . PASS END=171560971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 171560972 . G . PASS END=171560973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 171560974 . A . PASS END=171560974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,864:0,51,255:25,0 chr1 171560975 . A . PASS END=171560975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:25,0 chr1 171560976 . C . PASS END=171560976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:28,0 chr1 171560977 . A . PASS END=171560977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,900:0,40,255:25,0 chr1 171560978 . A . LowGQ END=171560981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,713:0,0,255:25,0 chr1 171560982 . C . PASS END=171560982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:25,0 chr1 171560983 . T . LowGQ END=171560983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:29:0,0,866:7,0,255:23,0 chr1 171560984 . T . PASS END=171560984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,859:0,21,255:23,0 chr1 171560985 . A . LowGQ END=171560986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,688:2,0,255:23,0 chr1 171593024 . A . PASS END=171593118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:52:0,120,1800:0,121,255:40,0 chr1 171595594 . A . PASS END=171595598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 171595599 . A . PASS END=171595599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,622:0,46,255:20,0 chr1 171595600 . G . PASS END=171595600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 171595601 . A . PASS END=171595601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 171595602 . T . PASS END=171595602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 171595603 . A . PASS END=171595603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,631:0,32,255:20,0 chr1 171595604 . A . PASS END=171595612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:21,0 chr1 171595613 . A . PASS END=171595613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 171595614 . A . PASS END=171595620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr1 171595621 . T . PASS END=171595621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 171595622 . G . PASS END=171595622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 171595623 . A . PASS END=171595623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 171595624 . A . PASS END=171595625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:24,0 chr1 171595626 . C . PASS END=171595626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 171595627 . T . PASS END=171595661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,817:0,62,255:26,0 chr1 171595662 . C . PASS END=171595662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,886:0,50,255:24,0 chr1 171595663 . C . PASS END=171595671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 171595672 . T . PASS END=171595673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171595674 . A . PASS END=171595680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 171595681 . C . PASS END=171595703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,630:0,45,255:17,0 chr1 171595704 . C . PASS END=171595705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 171595706 . C . PASS END=171595706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:11,0 chr1 171595707 . C . PASS END=171595714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 171595715 . C . PASS END=171595715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr1 171595716 . C . PASS END=171595732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:11,0 chr1 171595733 . G . PASS END=171595735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 171595736 . T . PASS END=171595739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 171595740 . A . PASS END=171595740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 171595741 . A . PASS END=171595741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 171604639 . G . PASS END=171604639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1274:0,102,255:34,0 chr1 171604734 . T . PASS END=171604734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 171604792 . C . PASS END=171604792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr1 171604824 . T . PASS END=171604824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 171604877 . G . PASS END=171604877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,120,255:31,0 chr1 171604883 . G . PASS END=171604883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr1 171604994 . C . PASS END=171604994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 171605065 . T . PASS END=171605261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:37:0,98,1373:0,98,255:40,0 chr1 171605262 . T . PASS END=171605262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:33,0 chr1 171605263 . G . PASS END=171605291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,96,255:35,0 chr1 171605292 . A . PASS END=171605307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,77,255:26,0 chr1 171605308 . C . PASS END=171605309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 171605310 . G . PASS END=171605324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,856:0,61,255:24,0 chr1 171605325 . T . PASS END=171605325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 171605326 . C . PASS END=171605329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 171605330 . C . PASS END=171605330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 171605331 . A . PASS END=171605338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,794:0,61,255:26,0 chr1 171605339 . T . PASS END=171605340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 171605341 . G . PASS END=171605360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,990:0,68,255:26,0 chr1 171605361 . T . PASS END=171605364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr1 171605365 . T . PASS END=171605365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171605366 . T . PASS END=171605367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,940:0,48,255:24,0 chr1 171605368 . G . PASS END=171605368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1030:0,35,255:24,0 chr1 171605369 . G . PASS END=171605369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 171605370 . A . PASS END=171605373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,993:0,51,255:26,0 chr1 171605374 . G . PASS END=171605375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 171605376 . C . PASS END=171605377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:51:30:0,51,1031:0,51,255:28,0 chr1 171605378 . A . PASS END=171605379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171605380 . G . PASS END=171605388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 171605389 . G . PASS END=171605389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 171605390 . G . PASS END=171605562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:30:0,82,1149:0,82,255:39,0 chr1 171605563 . A . PASS END=171605563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1225:0,56,255:30,0 chr1 171605564 . G . PASS END=171605565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1304:0,94,255:31,0 chr1 171605566 . G . PASS END=171605572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:60:33:0,60,1126:0,60,255:33,0 chr1 171605573 . A . PASS END=171605573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 171605574 . A . PASS END=171605575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1251:0,45,255:34,0 chr1 171605576 . T . PASS END=171605576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:36,0 chr1 171605577 . A . PASS END=171605577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:34,0 chr1 171605578 . G . PASS END=171605578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 171605579 . A . PASS END=171605579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1341:0,98,255:35,0 chr1 171605580 . G . PASS END=171605581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:76:38:0,76,1328:0,76,255:37,0 chr1 171605582 . C . PASS END=171605582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 171605583 . T . PASS END=171605583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:34,0 chr1 171605584 . C . PASS END=171605677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1374:0,81,255:40,0 chr1 171605678 . T . PASS END=171605678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 171605679 . A . PASS END=171605680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:98:38:0,98,1388:0,98,255:37,0 chr1 171605681 . T . PASS END=171605681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 171605682 . C . PASS END=171605682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 171605683 . A . PASS END=171605683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:36,0 chr1 171605684 . A . PASS END=171605685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 171605686 . A . PASS END=171605686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:36,0 chr1 171605687 . A . PASS END=171605747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:34:0,83,1190:0,83,255:40,0 chr1 171605748 . A . PASS END=171605748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:26,0 chr1 171605749 . G . PASS END=171605752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr1 171605753 . G . PASS END=171605755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr1 171605756 . T . PASS END=171605756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,963:0,21,255:28,0 chr1 171605757 . T . PASS END=171605757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 171605758 . G . PASS END=171605761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 171605762 . T . PASS END=171605788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,895:0,70,255:26,0 chr1 171605789 . G . PASS END=171605789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr1 171605790 . T . PASS END=171605808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 171605809 . C . PASS END=171605837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:17,0 chr1 171605838 . G . PASS END=171605849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 171607737 . C . PASS END=171607739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 171607740 . T . PASS END=171607770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,474:0,42,255:18,0 chr1 171607771 . T . PASS END=171607771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 171607772 . G . PASS END=171607829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,582:0,45,255:19,0 chr1 171607830 . G . PASS END=171607857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 171607858 . A . PASS END=171607862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 171612528 . C . PASS END=171612531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 171621148 . C . PASS END=171621149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,562:0,51,255:17,0 chr1 171621150 . T . PASS END=171621150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 171621151 . C . PASS END=171621156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 171621157 . A . PASS END=171621157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:14,0 chr1 171621158 . G . PASS END=171621169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr1 171621170 . A . PASS END=171621182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:25,0 chr1 171621183 . T . PASS END=171621183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 171621184 . C . PASS END=171621187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:26,0 chr1 171621188 . G . PASS END=171621348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1088:0,80,255:40,0 chr1 171621349 . T . PASS END=171621349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,959:0,76,255:26,0 chr1 171621350 . T . PASS END=171621351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 171621352 . G . PASS END=171621369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,71,255:26,0 chr1 171621370 . G . PASS END=171621392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 171621393 . T . PASS END=171621405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,71,255:26,0 chr1 171621406 . C . PASS END=171621409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 171621410 . C . PASS END=171621445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:24,0 chr1 171621446 . C . PASS END=171621446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 171621447 . A . PASS END=171621447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 171621448 . A . PASS END=171621449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:23,0 chr1 171621450 . T . PASS END=171621459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:24,0 chr1 171621460 . G . PASS END=171621462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 171621463 . T . PASS END=171621470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,945:0,62,255:24,0 chr1 171621471 . G . PASS END=171621487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1111:0,90,255:31,0 chr1 171621488 . G . PASS END=171621488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:29,0 chr1 171621489 . G . PASS END=171621573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1122:0,91,255:36,0 chr1 171621574 . T . PASS END=171621574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1241:0,61,255:32,0 chr1 171621575 . G . PASS END=171621726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:35:0,99,1344:0,100,255:40,0 chr1 171621727 . A . PASS END=171621727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:34,0 chr1 171621728 . G . PASS END=171621738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,111,255:32,0 chr1 171621739 . A . PASS END=171621751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr1 171673646 . T . PASS END=171673674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:92:0,120,1800:0,247,255:40,0 chr1 171675507 . T . PASS END=171675558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:83:0,120,1800:0,239,255:40,0 chr1 171678805 . T . PASS END=171678884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:59:0,120,1800:0,165,255:40,0 chr1 171679854 . C . PASS END=171679881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,101,1800:0,101,255:40,0 chr1 171679882 . C . PASS END=171679882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,10:71:23:71:0,23,1530:0,23,255:40,0 chr1 171679883 . T . PASS END=171679920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,177,255:40,0 chr1 171679921 . G . PASS END=171679954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,146,255:40,0 chr1 171688311 . T . PASS END=171688361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:87:0,120,1800:0,254,255:40,0 chr1 171697664 . A . PASS END=171697710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:78:0,120,1800:0,222,255:40,0 chr1 171707489 . C . PASS END=171707554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,120,1800:0,140,255:40,0 chr1 171751108 . A . PASS END=171751112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr1 171751113 . C . PASS END=171751119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:30,0 chr1 171751120 . C . PASS END=171751121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 171751122 . T . PASS END=171751129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1101:0,90,255:31,0 chr1 171751130 . C . PASS END=171751130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 171751131 . C . PASS END=171751133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 171751134 . G . PASS END=171751134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 171751135 . G . PASS END=171751198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1196:0,84,255:38,0 chr1 171751199 . G . PASS END=171751224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1178:0,83,255:34,0 chr1 171751225 . G . PASS END=171751235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:24,0 chr1 171751236 . T C, 50.00 PASS DP=27;MQ=249.96;MQRankSum=3.741;ReadPosRankSum=1.833;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,17,0:0.630,0.000:27:4,10,0:6,7,0:46:85,0,46,590,355,945:255,0,255:8,0:5.0000e+01,9.7850e-05,4.9014e+01,4.5000e+02,3.9007e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,5,12:7,3,6,11 chr1 171751237 . A . PASS END=171751246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 171751247 . A . PASS END=171751247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,689:0,47,255:20,0 chr1 171751248 . G . PASS END=171751252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 171751253 . G . PASS END=171751253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 171751254 . G . PASS END=171751255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 171751256 . A . PASS END=171751256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 171751257 . A . PASS END=171751257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 171751258 . A . PASS END=171751260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 171752880 . G . PASS END=171752884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1072:0,90,255:30,0 chr1 171752885 . G . PASS END=171752885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 171752886 . G . PASS END=171752888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 171752889 . A . PASS END=171752889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 171752890 . T . PASS END=171752891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 171752892 . G . PASS END=171752892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 171752893 . G . PASS END=171752893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 171752894 . G . PASS END=171752894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1065:0,62,255:29,0 chr1 171752895 . T . PASS END=171753001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:31:0,85,1119:0,85,255:40,0 chr1 171753002 . C . PASS END=171753038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,132,255:40,0 chr1 171753039 . A G, 49.53 PASS DP=54;MQ=250.00;MQRankSum=6.280;ReadPosRankSum=4.614;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,25,0:0.463,0.000:54:18,6,0:11,19,0:48:84,0,50,894,1029,1923:255,0,255:26,0:4.9528e+01,7.0152e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,12,13:11,18,11,14 chr1 171753040 . T . PASS END=171753076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,132,255:40,0 chr1 171753077 . G . PASS END=171753203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,89,255:40,0 chr1 171753204 . T . PASS END=171753204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr1 171753205 . C . PASS END=171753205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 171753206 . C . PASS END=171753208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 171753209 . G . PASS END=171753217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr1 171753218 . T . PASS END=171753243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,901:0,75,255:26,0 chr1 171753244 . A . PASS END=171753244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 171753245 . C . PASS END=171753248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,787:0,64,255:26,0 chr1 171753249 . T . PASS END=171753255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171753256 . A . PASS END=171753256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 171753257 . G . PASS END=171753260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 171753261 . T . PASS END=171753265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 171753266 . G . PASS END=171753268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 171753269 . G . PASS END=171753269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 171753270 . A . PASS END=171753270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,894:0,43,255:23,0 chr1 171753271 . G . PASS END=171753271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 171753272 . G . PASS END=171753272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:25,0 chr1 171753273 . G . PASS END=171753300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 171753301 . A . PASS END=171753301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 171753302 . G . PASS END=171753313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 171753314 . A . PASS END=171753314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171753315 . G . PASS END=171753315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 171753316 . A . PASS END=171753317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 171753318 . C . PASS END=171753348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1019:0,87,255:30,0 chr1 171753349 . T . PASS END=171753349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 171753350 . C . PASS END=171753351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 171753352 . T . PASS END=171753358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1084:0,74,255:26,0 chr1 171753359 . G . PASS END=171753365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1163:0,87,255:30,0 chr1 171753366 . C . PASS END=171753368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 171753369 . G . PASS END=171753379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1169:0,80,255:27,0 chr1 171753380 . T . PASS END=171753380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 171753381 . G . PASS END=171753384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 171753385 . T . PASS END=171753385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 171753386 . T . PASS END=171753386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 171753387 . C . PASS END=171753390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 171753391 . T . PASS END=171753391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:26,0 chr1 171753392 . C . PASS END=171753426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,878:0,65,255:26,0 chr1 171753427 . T . PASS END=171753427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 171753428 . G . PASS END=171753442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr1 171753443 . C . PASS END=171753443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 171753444 . G . PASS END=171753454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 171753455 . C . PASS END=171753455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 171753456 . G . PASS END=171753456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 171753457 . A . PASS END=171753460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 171753461 . G . PASS END=171753461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 171753462 . G . PASS END=171753463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171753464 . G . PASS END=171753468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171753469 . A . PASS END=171753474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 171753475 . A . PASS END=171753475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 171753476 . G . PASS END=171753481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 171753482 . T . PASS END=171753482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 171753483 . G . PASS END=171753493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 171753494 . C . PASS END=171753494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:27,0 chr1 171753495 . A . PASS END=171753506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 171753507 . C . PASS END=171753508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 171753509 . C . PASS END=171753517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 171753518 . G . PASS END=171753518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 171753519 . C . PASS END=171753523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 171753524 . G . PASS END=171753551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 171753552 . G . PASS END=171753555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 171753556 . C . PASS END=171753565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 171753566 . A . PASS END=171753568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1141:0,90,255:30,0 chr1 171753569 . C . PASS END=171753569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 171753570 . T . PASS END=171753589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:30,0 chr1 171753590 . C . PASS END=171753592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171753593 . C . PASS END=171753595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171753596 . C . PASS END=171753596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 171753597 . A . PASS END=171753611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 171753612 . C . PASS END=171753612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 171753613 . G . PASS END=171753617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 171753618 . A . PASS END=171753620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr1 171753621 . C . PASS END=171753623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171753624 . T . PASS END=171753624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,865:0,70,255:26,0 chr1 171753625 . T . PASS END=171753629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 171753630 . A . PASS END=171753630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 171753631 . T . PASS END=171753631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171753632 . T . PASS END=171753633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171753634 . T . PASS END=171753634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171753635 . C . PASS END=171753639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171755019 . T . PASS END=171755022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:25,0 chr1 171755023 . T . PASS END=171755023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 171755024 . C . PASS END=171755024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 171755025 . A . PASS END=171755025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 171755026 . G . PASS END=171755026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 171755027 . G . PASS END=171755132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1016:0,81,255:33,0 chr1 171755133 . A . PASS END=171755148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 171755149 . C . PASS END=171755169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,62,255:25,0 chr1 171755170 . G A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=2.436;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:5,7,0:6,7,0:48:85,0,49,498,393,891:255,0,255:11,0:5.0000e+01,6.9634e-05,5.2215e+01,4.5000e+02,4.2812e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,5,9:3,8,6,8 chr1 171755171 . G . PASS END=171755182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 171755183 . G . PASS END=171755207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 171755208 . C . PASS END=171755218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:17,0 chr1 171756875 . G . PASS END=171756876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 171756877 . C . PASS END=171756877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 171756878 . C . PASS END=171756882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 171756883 . T . PASS END=171756883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 171756884 . C . PASS END=171756899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:17,0 chr1 171756900 . A . PASS END=171756900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 171756901 . C . PASS END=171756906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,601:0,54,255:18,0 chr1 171756907 . G . PASS END=171756921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 171756922 . G . PASS END=171756923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 171756924 . A . PASS END=171756924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 171756925 . C . PASS END=171756941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,997:0,87,255:30,0 chr1 171756942 . T . PASS END=171756942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 171756943 . G . PASS END=171757000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1161:0,80,255:34,0 chr1 171757001 . C . PASS END=171757001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 171757002 . T . PASS END=171757016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1164:0,93,255:31,0 chr1 171757017 . A . PASS END=171757018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 171757019 . A . PASS END=171757041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 171757042 . C . PASS END=171757056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:25,0 chr1 171757057 . T . PASS END=171757059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:17,0 chr1 171757060 . G . PASS END=171757060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:16,0 chr1 171757061 . T . PASS END=171757070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,720:0,47,255:17,0 chr1 171759592 . C . PASS END=171759594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 171759595 . A . PASS END=171759595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 171759596 . G . PASS END=171759615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:26,0 chr1 171759616 . G . PASS END=171759678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1003:0,87,255:37,0 chr1 171759679 . A . PASS END=171759679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:31,0 chr1 171759680 . G . PASS END=171759719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1186:0,82,255:34,0 chr1 171759720 . G . PASS END=171759722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 171759723 . C . PASS END=171759724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 171759725 . T . PASS END=171759725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 171759726 . G . PASS END=171759727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 171759728 . C . PASS END=171759728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 171759729 . C . PASS END=171759729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 171759730 . T . PASS END=171759754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,841:0,61,255:26,0 chr1 171759755 . A . PASS END=171759756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,815:0,55,255:19,0 chr1 171761157 . A . PASS END=171761166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,779:0,66,255:24,0 chr1 171761167 . G . PASS END=171761167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 171761168 . G . PASS END=171761175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 171761176 . G . PASS END=171761176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 171761177 . G . PASS END=171761183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:23,0 chr1 171761184 . G . PASS END=171761184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 171761185 . C . PASS END=171761201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,853:0,69,255:26,0 chr1 171761202 . T . PASS END=171761203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 171761204 . C . PASS END=171761215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 171761216 . C . PASS END=171761216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 171761217 . A . PASS END=171761220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 171761221 . T . PASS END=171761227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 171761228 . C . PASS END=171761241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1076:0,77,255:27,0 chr1 171761242 . T . PASS END=171761245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 171761246 . G . PASS END=171761246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 171761247 . C . PASS END=171761276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1087:0,82,255:30,0 chr1 171761277 . T . PASS END=171761277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 171761278 . G . PASS END=171761286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 171761287 . G . PASS END=171761291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 171761292 . T . PASS END=171761296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 171761297 . T . PASS END=171761300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,903:0,67,255:27,0 chr1 171761301 . C . PASS END=171761316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr1 171761317 . G . PASS END=171761317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 171761318 . A . PASS END=171761321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 171761322 . T . PASS END=171761322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:29,0 chr1 171761323 . C . PASS END=171761324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 171761325 . A . PASS END=171761333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 171761334 . A . PASS END=171761334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:35:28:0,35,912:0,35,255:21,0 chr1 171761335 . T . PASS END=171761335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:22,0 chr1 171761336 . G . PASS END=171761344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,902:0,64,255:25,0 chr1 171761345 . T . PASS END=171761345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,754:0,42,255:20,0 chr1 171761346 . A . PASS END=171761346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 171761347 . T . PASS END=171761347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr1 171761348 . A . PASS END=171761361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,868:0,69,255:23,0 chr1 171761362 . A . PASS END=171761362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 171761363 . G . PASS END=171761363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 171761364 . G . PASS END=171761364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 171761365 . A . PASS END=171761366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 171761367 . G . PASS END=171761368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 171761369 . G . PASS END=171761370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 171761371 . A . PASS END=171761375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 171763536 . C . PASS END=171763536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 171763537 . A . PASS END=171763537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:28,0 chr1 171763538 . C . PASS END=171763556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1117:0,86,255:36,0 chr1 171763557 . T . PASS END=171763557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr1 171763558 . A . PASS END=171763559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1319:0,97,255:36,0 chr1 171763560 . T . PASS END=171763667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,99,1366:0,100,255:40,0 chr1 171765622 . G . PASS END=171765628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 171765629 . T . PASS END=171765632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:26,0 chr1 171765633 . C . PASS END=171765633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 171765634 . T . PASS END=171765634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 171765635 . C . PASS END=171765709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1039:0,84,255:40,0 chr1 171765710 . T . PASS END=171765710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1250:0,56,255:33,0 chr1 171765711 . G . PASS END=171765718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:37,0 chr1 171765719 . A . PASS END=171765719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1238:0,72,255:32,0 chr1 171765720 . A . PASS END=171765741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:34,0 chr1 171765742 . T . PASS END=171765742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:32,0 chr1 171765743 . C . PASS END=171765787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1169:0,80,255:35,0 chr1 171765788 . G . PASS END=171765795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 171765796 . A . PASS END=171765796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:26,0 chr1 171765797 . A . PASS END=171765833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:26,0 chr1 171765834 . G . PASS END=171765834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 171765835 . G . PASS END=171765842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 171765843 . T . PASS END=171765869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:15:0,43,551:0,43,255:19,0 chr1 171765870 . A . PASS END=171765895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 171765896 . A . PASS END=171765896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 171783015 . G . PASS END=171783148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:45:0,108,1659:0,108,255:40,0 chr1 171783149 . A . PASS END=171783163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:38:0,87,1305:0,114,255:38,0 chr1 171788613 . T . PASS END=171788648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:73:0,120,1800:0,168,255:40,0 chr1 171793058 . G . PASS END=171793087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:67:0,120,1800:0,150,255:40,0 chr1 171810797 . A . PASS END=171810798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,536:0,48,255:16,0 chr1 171810799 . G . PASS END=171810799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 171810800 . G . PASS END=171810814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:19,0 chr1 171810815 . G . PASS END=171810815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 171810816 . A . PASS END=171810826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 171810827 . C . PASS END=171810839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,846:0,63,255:25,0 chr1 171810840 . G . PASS END=171810840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 171810841 . T . PASS END=171810892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr1 171810893 . C . PASS END=171810893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 171810894 . A . PASS END=171810922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 171810923 . G . PASS END=171810932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 171810933 . C . PASS END=171810957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr1 171868476 . A . PASS END=171868507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,149,255:40,0 chr1 171890888 . G . PASS END=171890961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,114,1800:0,114,255:40,0 chr1 171956796 . A . PASS END=171956945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:37:0,81,1215:0,111,255:40,0 chr1 171958085 . T . PASS END=171958288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:37:0,87,1311:0,87,255:40,0 chr1 172001542 . G . PASS END=172001616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,149,255:40,0 chr1 172001617 . A . PASS END=172001629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,116,1800:0,116,255:40,0 chr1 172001630 . T . PASS END=172001630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,5:67:59:67:0,59,2008:0,59,255:40,0 chr1 172001631 . C . PASS END=172001636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,3:65:99:64:0,115,1800:0,115,255:40,0 chr1 172001637 . A . PASS END=172001637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:78:63:0,78,1960:0,78,255:40,0 chr1 172001638 . G . PASS END=172001640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:99:63:0,99,1485:0,134,255:40,0 chr1 172002245 . G . PASS END=172002389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:34:0,81,1215:0,86,255:40,0 chr1 172002390 . G . PASS END=172002401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:25,0 chr1 172002402 . T . PASS END=172002402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:21,0 chr1 172002403 . C . PASS END=172002404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 172002405 . G . PASS END=172002405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 172007459 . C . PASS END=172007601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,117,1755:0,131,255:40,0 chr1 172011149 . G . PASS END=172011152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:24,0 chr1 172011153 . G . PASS END=172011155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 172011156 . C . PASS END=172011156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 172011157 . A . PASS END=172011162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 172011163 . T . PASS END=172011163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 172011164 . T . PASS END=172011284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:32:0,93,1267:0,96,255:40,0 chr1 172013525 . A . PASS END=172013592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:71:0,120,1800:0,200,255:40,0 chr1 172017752 . G . PASS END=172017866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:35:0,87,1263:0,89,255:40,0 chr1 172017867 . A . PASS END=172017886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:29:0,69,992:0,70,255:29,2 chr1 172017887 . A . PASS END=172017890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 172024918 . G . PASS END=172024995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,101,1361:0,101,255:40,0 chr1 172037959 . C . PASS END=172038041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,99,1529:0,99,255:40,0 chr1 172038042 . C . PASS END=172038045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,111,1665:0,138,255:40,0 chr1 172050972 . G . PASS END=172051042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:96:42:0,96,1512:0,96,255:40,0 chr1 172061964 . T . PASS END=172062015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,113,1459:0,113,255:40,0 chr1 172062836 . G . PASS END=172062881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:69:0,120,1800:0,181,255:40,0 chr1 172100315 . G . PASS END=172100428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:40:0,90,1350:0,120,255:40,0 chr1 172102029 . A . PASS END=172102037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:71:0,120,1800:0,150,255:40,0 chr1 172134700 . A . PASS END=172134703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1371:0,95,255:35,0 chr1 172134704 . C . PASS END=172134704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr1 172134705 . T . PASS END=172134841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1260:0,87,255:40,0 chr1 172134842 . A . PASS END=172134843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,85,255:26,0 chr1 172151955 . G . PASS END=172152047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,156,255:40,0 chr1 172177295 . T . PASS END=172177312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:72:0,120,1800:0,200,255:40,0 chr1 172222713 . G . PASS END=172222822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:52:0,120,1800:0,139,255:40,0 chr1 172277868 . G . PASS END=172277868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1037:0,46,255:29,0 chr1 172277869 . A . PASS END=172277869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 172277870 . A . PASS END=172277871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1117:0,47,255:32,0 chr1 172277872 . G . PASS END=172277872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1117:0,25,255:32,0 chr1 172277873 . T . PASS END=172277873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:32,0 chr1 172277874 . A . PASS END=172277875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:36:0,75,1304:0,75,255:37,0 chr1 172277876 . A . PASS END=172277876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1294:0,59,255:36,0 chr1 172277877 . C . PASS END=172277877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 172277878 . A . PASS END=172277924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:38:0,82,1222:0,82,255:40,0 chr1 172277925 . C T, 45.30 PASS DP=47;MQ=250.00;MQRankSum=5.701;ReadPosRankSum=-0.055;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,18,0:0.383,0.000:47:12,13,0:17,5,0:45:80,0,50,644,1037,1681:255,0,255:30,0:4.5296e+01,1.5014e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,8,10:15,14,9,9 chr1 172277926 . G . PASS END=172277962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,106,1745:0,106,255:40,0 chr1 172277963 . A . PASS END=172278016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1327:0,84,255:40,0 chr1 172278017 . A . PASS END=172278017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:30,0 chr1 172278018 . G . PASS END=172278018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 172292469 . G . PASS END=172292480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr1 172348158 . G . PASS END=172348322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:38:0,80,1350:0,80,255:40,0 chr1 172356273 . G . PASS END=172356290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,886:0,69,255:24,0 chr1 172356291 . T . PASS END=172356291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 172356292 . C . PASS END=172356296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 172356297 . C . PASS END=172356297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 172356298 . T . PASS END=172356309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,947:0,67,255:26,0 chr1 172356310 . T . PASS END=172356339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:31,0 chr1 172356340 . T . PASS END=172356340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:30,0 chr1 172356341 . G . PASS END=172356366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1166:0,86,255:33,0 chr1 172356367 . G . PASS END=172356367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:31,0 chr1 172356368 . C . PASS END=172356399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:35:0,95,1271:0,95,255:37,0 chr1 172356400 . T . PASS END=172356436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1288:0,92,255:35,0 chr1 172356437 . A G, 151.88 PASS DP=37;MQ=250.00;FractionInformativeReads=0.946 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,15,0:0,20,0:102:190,105,0,1328,105,1328:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,23:0,0,18,17 chr1 172356438 . G . PASS END=172356442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:30,0 chr1 172356443 . C . PASS END=172356443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1247:0,53,255:29,0 chr1 172356444 . G . PASS END=172356462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 172356463 . C . PASS END=172356468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr1 172356469 . T . PASS END=172356469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,968:0,45,255:23,0 chr1 172356470 . G . PASS END=172356473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 172356474 . G . PASS END=172356474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 172356475 . A . PASS END=172356489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:19:0,54,810:0,57,255:19,0 chr1 172356490 . A . PASS END=172356490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 172356491 . C . PASS END=172356496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,613:0,54,255:18,0 chr1 172356497 . C . PASS END=172356499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 172357713 . G . PASS END=172357719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:12,0 chr1 172357720 . C . PASS END=172357744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:18,0 chr1 172357745 . G . PASS END=172357783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,853:0,63,255:26,0 chr1 172357784 . G . PASS END=172357784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 172357785 . C . PASS END=172357796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,955:0,78,255:26,0 chr1 172357797 . T . PASS END=172357797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 172357798 . C . PASS END=172357798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 172357799 . C . PASS END=172357800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 172357801 . G . PASS END=172357823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,939:0,72,255:26,0 chr1 172357824 . C . PASS END=172357836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:30,0 chr1 172357837 . C . PASS END=172357837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 172357838 . C . PASS END=172357854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1096:0,90,255:30,0 chr1 172357855 . G . PASS END=172357855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 172357856 . G . PASS END=172357866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 172357867 . C . PASS END=172357870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 172357871 . T . PASS END=172357872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 172357873 . C . PASS END=172357910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:24,0 chr1 172357911 . T . PASS END=172357927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:18,0 chr1 172357928 . G . PASS END=172357946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 172357947 . A . PASS END=172357947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,380:0,5,255:9,0 chr1 172357948 . A . PASS END=172357949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 172362589 . G . PASS END=172362610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1346:0,81,255:39,0 chr1 172362611 . G . PASS END=172362611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1343:0,76,255:37,0 chr1 172362612 . C . PASS END=172362625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1419:0,104,255:40,0 chr1 172376912 . C . PASS END=172376981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:40:0,84,1405:0,84,255:40,0 chr1 172387421 . G . PASS END=172387457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:86:0,120,1800:0,242,255:40,0 chr1 172390026 . A . PASS END=172390046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:110:0,120,1800:0,255,255:40,0 chr1 172397934 . A . PASS END=172397970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:86:0,120,1800:0,246,255:40,0 chr1 172399432 . G . PASS END=172399475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,99,1485:0,121,255:40,0 chr1 172400220 . T . PASS END=172400231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1507:0,112,255:40,0 chr1 172410869 . T . PASS END=172410929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,107,1452:0,107,255:40,0 chr1 172410930 . T . PASS END=172410966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,150,255:40,0 chr1 172410967 . G A, 232.68 PASS DP=62;MQ=237.12;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,23,0:0,39,0:183:270,186,0,2345,186,2345:255,186,0:0,0:2.3268e+02,1.8268e+02,0.0000e+00,4.5000e+02,2.1745e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,38:0,0,35,27 chr1 172410968 . A . PASS END=172411004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,122,255:40,0 chr1 172411005 . A . PASS END=172411458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:93:37:0,93,1395:0,99,255:40,0 chr1 172411459 . G . PASS END=172411495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:77:0,120,1800:0,204,255:40,0 chr1 172411496 . A G, 285.53 PASS DP=81;MQ=157.45;FractionInformativeReads=0.988 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,80,0:1.000,0.000:80:0,39,0:0,41,0:236:323,239,0,2977,239,2977:255,243,0:0,0:2.8553e+02,2.3593e+02,0.0000e+00,4.5000e+02,2.7070e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,41,39:0,0,40,40 chr1 172411497 . C . PASS END=172411533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:80:0,120,1800:0,194,255:40,0 chr1 172411534 . C . PASS END=172411625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:75:0,120,1800:0,197,255:40,0 chr1 172411626 . T . PASS END=172411626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,9:77:45:77:0,45,2047:0,45,255:40,0 chr1 172411627 . A . PASS END=172411750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:86:34:0,86,1233:0,86,255:40,0 chr1 172411751 . T . PASS END=172411759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:29:0,62,945:0,62,255:26,0 chr1 172411760 . C . PASS END=172411760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:20,0 chr1 172411761 . A . PASS END=172411762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,67,255:22,0 chr1 172413405 . A . PASS END=172413423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 172413424 . G . PASS END=172413425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 172414213 . G . PASS END=172414241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1114:0,83,255:38,0 chr1 172414242 . T . PASS END=172414242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1178:0,64,255:35,0 chr1 172414243 . T . PASS END=172414298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1172:0,85,255:40,0 chr1 172417581 . A . PASS END=172417595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:60:0,120,1800:0,147,255:40,0 chr1 172417596 . T . PASS END=172417671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:72:0,120,1800:0,183,255:40,0 chr1 172422162 . A . PASS END=172422162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1368:0,74,255:33,0 chr1 172422163 . T . PASS END=172422167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1273:0,87,255:39,0 chr1 172422168 . G . PASS END=172422168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1222:0,51,255:35,0 chr1 172422169 . A . PASS END=172422170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:95:40:0,95,1476:0,95,255:40,0 chr1 172422171 . A . PASS END=172422171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1394:0,76,255:39,0 chr1 172422172 . T . PASS END=172422198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:42:0,97,1347:0,97,255:40,0 chr1 172422199 . A . PASS END=172422199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:6:53:0,6,1300:0,6,255:40,0 chr1 172422200 . T . PASS END=172422211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:54:0,120,1800:0,129,255:40,0 chr1 172422212 . C . PASS END=172422212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,7:56:51:56:0,51,1461:0,51,255:40,0 chr1 172422213 . T . PASS END=172422226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:56:0,104,1696:0,104,255:40,0 chr1 172422227 . T . PASS END=172422227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:74:60:0,74,1601:0,74,255:40,0 chr1 172422228 . C . PASS END=172422238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:57:0,93,1605:0,93,255:40,0 chr1 172422239 . T . PASS END=172422239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,6:62:71:62:0,71,1684:0,71,255:40,0 chr1 172422240 . C . PASS END=172422329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:93:42:0,93,1395:0,115,255:40,0 chr1 172425555 . G . PASS END=172425566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1341:0,95,255:38,0 chr1 172425567 . C . PASS END=172425629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:39:0,97,1438:0,97,255:40,0 chr1 172431318 . G . PASS END=172431332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,181,255:40,1 chr1 172431333 . A G, 47.51 PASS DP=75;MQ=250.00;MQRankSum=7.332;ReadPosRankSum=5.299;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,31,0:0.413,0.000:75:22,15,0:22,16,0:46:82,0,50,1101,1545,2646:255,0,255:40,0:4.7514e+01,9.8627e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,19,12,19:23,21,20,11 chr1 172431334 . T . PASS END=172431385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,172,255:40,0 chr1 172434439 . A . PASS END=172434503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,148,255:40,0 chr1 172434747 . G . PASS END=172434774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:56:0,120,1800:0,161,255:40,0 chr1 172434775 . T . PASS END=172434805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,161,255:40,0 chr1 172437589 . A . PASS END=172437591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 172437592 . G A, 124.78 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,14,0:0,12,0:75:163,78,0,963,78,963:255,78,0:0,0:1.2478e+02,7.4782e+01,2.5886e-07,4.5000e+02,1.0955e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,8:0,0,18,8 chr1 172437593 . C . PASS END=172437593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 172437594 . A . PASS END=172437629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1000:0,81,255:40,0 chr1 172437630 . G . PASS END=172437724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:31:0,80,1107:0,80,255:40,1 chr1 172437725 . G . PASS END=172437725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr1 172437726 . A . PASS END=172437728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1074:0,90,255:30,0 chr1 172437729 . C . PASS END=172437729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr1 172437730 . A . PASS END=172437731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 172437732 . T . PASS END=172437734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 172501613 . A . PASS END=172501615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 172501616 . A . PASS END=172501617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 172501618 . A . PASS END=172501628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 172501629 . C . PASS END=172501638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:19,0 chr1 172501639 . T . PASS END=172501645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 172501646 . A . PASS END=172501646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 172501647 . C . PASS END=172501656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 172501657 . T . PASS END=172501657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr1 172501658 . C . PASS END=172501673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,792:0,66,255:25,0 chr1 172501674 . G . PASS END=172501680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 172501681 . G . PASS END=172501681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr1 172501682 . C . PASS END=172501689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 172501690 . A . PASS END=172501690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 172501691 . A . PASS END=172501697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:29,0 chr1 172501698 . T . PASS END=172501698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 172501699 . G . PASS END=172501746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:29:0,80,1064:0,80,255:35,0 chr1 172501747 . A . PASS END=172501747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1004:0,71,255:33,0 chr1 172501748 . C . PASS END=172501787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1253:0,84,255:39,0 chr1 172501788 . T . PASS END=172501788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 172501789 . G . PASS END=172501794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1263:0,89,255:33,0 chr1 172501795 . T . PASS END=172501795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1044:0,71,255:31,0 chr1 172501796 . C . PASS END=172501809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1233:0,86,255:33,0 chr1 172501810 . C . PASS END=172501819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 172501820 . G . PASS END=172501821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 172501822 . C . PASS END=172501856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr1 172501857 . G . PASS END=172501857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,825:0,36,255:23,0 chr1 172501858 . G . PASS END=172501865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,836:0,75,255:25,0 chr1 172501866 . A . PASS END=172501866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 172501867 . A . PASS END=172501871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 172501872 . G . PASS END=172501873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:23,0 chr1 172501874 . A . PASS END=172501875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 172501876 . T . PASS END=172501876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 172501877 . C . PASS END=172501889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 172501890 . T . PASS END=172501890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr1 172501891 . A . PASS END=172501891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 172501892 . C . PASS END=172501899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:24:0,45,675:0,58,255:19,0 chr1 172501900 . A . PASS END=172501902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,799:0,33,255:17,0 chr1 172501903 . G . PASS END=172501938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,50,255:19,0 chr1 172501939 . G . PASS END=172501939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 172502317 . G . PASS END=172502319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 172502320 . G . PASS END=172502321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 172502322 . C . PASS END=172502322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 172502323 . G . PASS END=172502331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 172502332 . C . PASS END=172502332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 172502333 . C . PASS END=172502334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 172502335 . G . PASS END=172502335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 172502336 . T . PASS END=172502345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 172502346 . G . PASS END=172502386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 172502387 . C . PASS END=172502391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 172502392 . G . PASS END=172502394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 172502395 . G . PASS END=172502428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 172502429 . C . PASS END=172502441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 172502442 . C . PASS END=172502455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 172502456 . G . PASS END=172502457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 172502458 . C . PASS END=172502478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 172502479 . T C, 49.27 PASS DP=12;MQ=250.00;MQRankSum=2.793;ReadPosRankSum=0.689;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,5,0:0.417,0.000:12:4,3,0:3,2,0:48:84,0,50,179,242,421:150,0,227:7,0:4.9273e+01,7.2999e-05,5.3000e+01,1.7880e+02,2.7704e+02,4.2406e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,2,3:6,1,2,3 chr1 172502480 . C . PASS END=172502516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 172502517 . G . PASS END=172502529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 172502530 . C . PASS END=172502530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 172502531 . C . PASS END=172502544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 172502545 . G . PASS END=172502557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 172502558 . G . PASS END=172502597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr1 172502598 . T . PASS END=172502616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,311:0,27,255:9,0 chr1 172502617 . C . PASS END=172502617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 172502618 . T . PASS END=172502637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 172520652 . G . PASS END=172520766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:34:0,90,1336:0,95,255:40,0 chr1 172522400 . G . PASS END=172522510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:73:0,120,1800:0,159,255:40,0 chr1 172525009 . A . PASS END=172525163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:37:0,108,1519:0,110,255:40,0 chr1 172526420 . T . PASS END=172526557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:36:0,80,1266:0,80,255:40,0 chr1 172526784 . C . PASS END=172526934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,113,1660:0,113,255:40,0 chr1 172538159 . A . PASS END=172538160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1105:0,93,255:33,0 chr1 172538161 . C . PASS END=172538161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:32,0 chr1 172538162 . T . PASS END=172538187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1210:0,92,255:40,0 chr1 172538188 . T . PASS END=172538188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:71:53:0,71,1749:0,71,255:40,0 chr1 172538189 . G . PASS END=172538282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,116,1800:0,116,255:40,0 chr1 172539187 . G . PASS END=172539311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:84:38:0,84,1305:0,84,255:40,0 chr1 172539803 . A . PASS END=172539870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:80:0,120,1800:0,236,255:40,0 chr1 172543031 . G . PASS END=172543138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:74:0,120,1800:0,197,255:40,0 chr1 172544658 . A . PASS END=172544763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,122,255:40,0 chr1 172546679 . A . PASS END=172546699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:93:0,120,1800:0,255,255:40,0 chr1 172546904 . G . PASS END=172546959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,131,255:40,0 chr1 172547438 . G . PASS END=172547529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,197,255:40,0 chr1 172548342 . A . PASS END=172548407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:76:0,120,1800:0,210,255:40,0 chr1 172554158 . A . PASS END=172554226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:67:0,120,1800:0,188,255:40,0 chr1 172554998 . G . PASS END=172555088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,104,1457:0,104,255:40,0 chr1 172557900 . G . PASS END=172557910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:19,0 chr1 172557911 . C . PASS END=172557912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 172557913 . G . PASS END=172557913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 172557914 . A . PASS END=172557914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 172557915 . A . PASS END=172558486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:29:0,87,1100:0,87,255:40,0 chr1 172558487 . T . PASS END=172558523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:54:0,120,1800:0,146,255:40,0 chr1 172558524 . A G, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.469;ReadPosRankSum=2.434;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,33,0:0.569,0.000:58:12,14,0:13,19,0:48:85,0,48,1146,857,2003:255,0,255:23,0:5.0000e+01,7.5847e-05,5.1280e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,20,13:19,6,15,18 chr1 172558525 . T . PASS END=172558561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,144,255:40,0 chr1 172558562 . A . PASS END=172559066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:43:0,114,1621:0,119,255:40,0 chr1 172560124 . G . PASS END=172560211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,131,255:40,0 chr1 172569204 . G . PASS END=172569308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:49:0,120,1800:0,147,255:40,0 chr1 172571204 . G . PASS END=172571358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:41:0,90,1350:0,98,255:40,0 chr1 172571836 . G . PASS END=172571927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1737:0,120,255:40,0 chr1 172577887 . T . PASS END=172577910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,184,255:40,0 chr1 172577911 . T . PASS END=172577942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,217,255:40,0 chr1 172578956 . A . PASS END=172579381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:35:0,81,1159:0,91,255:40,0 chr1 172579382 . G . PASS END=172579392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,900:0,81,255:25,0 chr1 172579393 . T . PASS END=172579393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:19,0 chr1 172579394 . A . PASS END=172579394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 172579395 . T . PASS END=172579395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:18,0 chr1 172579396 . C . PASS END=172579396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 172579397 . T . PASS END=172579397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:19,0 chr1 172579398 . A . PASS END=172579399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 172627498 . C T, 197.48 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,21,0:0,29,0:147:235,150,0,1931,150,1931:255,150,0:0,0:1.9748e+02,1.4748e+02,0.0000e+00,4.5000e+02,1.8225e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,26:0,0,27,23 chr1 172628206 . G . PASS END=172628206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 172628342 . A . PASS END=172628344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 172628345 . C . PASS END=172628347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 172628348 . C . PASS END=172628348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 172628349 . A . PASS END=172628349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,873:0,53,255:25,0 chr1 172628350 . G . PASS END=172628353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 172628354 . T . PASS END=172628355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 172628356 . C . PASS END=172628356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 172628357 . A . PASS END=172628357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 172628358 . A . PASS END=172628359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 172628360 . T . PASS END=172628361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1092:0,74,255:26,0 chr1 172628362 . C . PASS END=172628362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 172628363 . C . PASS END=172628363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 172628364 . C . PASS END=172628365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 172628366 . T . PASS END=172628366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 172628367 . A . PASS END=172628372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:29,0 chr1 172628373 . A . PASS END=172628373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 172628374 . G . PASS END=172628377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr1 172628378 . T . PASS END=172628378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 172628379 . A . PASS END=172628381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 172628382 . G . PASS END=172628383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 172628384 . G . PASS END=172628390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:30,0 chr1 172628391 . G . PASS END=172628391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:29,0 chr1 172628392 . C . PASS END=172628440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1172:0,83,255:35,0 chr1 172628441 . A . PASS END=172628443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 172628444 . T . PASS END=172628450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1125:0,80,255:29,0 chr1 172628451 . C . PASS END=172628472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1019:0,87,255:31,0 chr1 172628473 . G . PASS END=172628475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 172628476 . A . PASS END=172628478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 172628479 . A . PASS END=172628487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 172628488 . G A, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.416;ReadPosRankSum=2.852;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,21,0:0.677,0.000:31:1,6,0:9,15,0:43:85,0,41,726,337,1063:255,0,255:9,0:5.0000e+01,2.0347e-04,4.4336e+01,4.5000e+02,3.7186e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,8,13:6,4,7,14 chr1 172628489 . C . PASS END=172628497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 172628498 . C . PASS END=172628502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 172628503 . A . PASS END=172628503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 172628504 . C . PASS END=172628509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,1 chr1 172628510 . C . PASS END=172628513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:52:30:0,52,1076:0,52,255:29,1 chr1 172628514 . C . PASS END=172628525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1100:0,87,255:29,0 chr1 172628526 . C . PASS END=172628541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:26,0 chr1 172628542 . G . PASS END=172628542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 172628543 . C . PASS END=172628543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 172628544 . T . PASS END=172628544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:20,0 chr1 172628545 . G . PASS END=172628548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 172628549 . C . PASS END=172628560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,776:0,66,255:22,0 chr1 172628561 . A . PASS END=172628561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 172628562 . G . PASS END=172628562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,717:0,66,255:22,0 chr1 172628563 . A . PASS END=172628565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 172628566 . G . PASS END=172628566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 172628567 . A . PASS END=172628591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:20:0,46,646:0,46,255:19,0 chr1 172628592 . T . PASS END=172628592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,597:0,21,255:18,0 chr1 172628593 . T . PASS END=172628594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 172628595 . T . PASS END=172628597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 172628598 . T . PASS END=172628600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 172628601 . T . PASS END=172628605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 172628606 . A . PASS END=172628617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,721:0,47,255:19,0 chr1 172628618 . G . PASS END=172628620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 172628621 . T . PASS END=172628621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 172628622 . T . PASS END=172628624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 172628625 . T . PASS END=172628642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,630:0,41,255:19,0 chr1 172628643 . T . PASS END=172628647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 172628648 . C . PASS END=172628660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 172628661 . T . PASS END=172628681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 172628682 . T . PASS END=172628682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 172628683 . C . PASS END=172628689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 172629235 . T . PASS END=172629280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,140,255:40,0 chr1 172629283 . G . PASS END=172629283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr1 172633474 . G . PASS END=172633530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,113,1665:0,113,255:40,0 chr1 172633537 . A . PASS END=172633537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 172634750 . G . PASS END=172634750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 172634762 . G . PASS END=172634771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:33:0,94,1181:0,94,255:36,0 chr1 172634772 . C . PASS END=172635156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:37:0,80,1374:0,80,255:40,2 chr1 172635210 . A . PASS END=172635210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,114,1710:0,141,255:38,0 chr1 172635275 . G . PASS END=172635276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1482:0,107,255:37,0 chr1 172635359 . C . PASS END=172635359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 172635462 . A . PASS END=172635462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 173010507 . C . PASS END=173010822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,99,1485:0,115,255:40,0 chr1 173010823 . G . PASS END=173010839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,94,255:36,0 chr1 173010840 . T . PASS END=173010840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 173010841 . G . PASS END=173010841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,95,255:26,0 chr1 173010842 . A . PASS END=173010853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:27:0,69,1035:0,79,255:26,0 chr1 173013079 . C . PASS END=173013109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,164,255:40,0 chr1 173019881 . C . PASS END=173020102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:37:0,83,1325:0,83,255:40,0 chr1 173155655 . T . PASS END=173156004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:36:0,84,1237:0,86,255:40,0 chr1 173157660 . C . PASS END=173157708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:91:0,120,1800:0,255,255:40,0 chr1 173174450 . C . PASS END=173174452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,206,255:40,0 chr1 173174626 . C . PASS END=173174627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:37:0,75,1331:0,75,255:33,1 chr1 173174628 . T . PASS END=173174628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1147:0,94,255:33,0 chr1 173174629 . T . PASS END=173174629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 173174630 . T . PASS END=173174650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:35:0,81,1215:0,94,255:39,0 chr1 173174651 . G A, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=1.268;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,22,0:0.537,0.000:41:8,12,0:11,10,0:48:85,0,49,779,556,1335:255,0,255:19,0:5.0000e+01,6.9116e-05,5.2287e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,6,12,10:8,11,8,14 chr1 173174652 . T . PASS END=173174688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,109,1665:0,109,255:40,0 chr1 173174689 . C . PASS END=173174874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:47:0,117,1800:0,117,255:40,0 chr1 173176163 . C . PASS END=173176186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:26,0 chr1 173176187 . G . PASS END=173176324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,1016:0,81,255:40,0 chr1 173177105 . C . PASS END=173177354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:92:37:0,92,1295:0,92,255:40,0 chr1 173177355 . T . PASS END=173177383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:99:94:0,120,1800:0,255,255:40,0 chr1 173371398 . C . PASS END=173371415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,158,255:40,0 chr1 173411058 . C . PASS END=173411081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,159,255:40,0 chr1 173446537 . A . PASS END=173446538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:19,0 chr1 173446539 . G . PASS END=173446542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 173446543 . G . PASS END=173446543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 173446544 . G . PASS END=173446545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 173446546 . G . PASS END=173446546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 173446547 . G . PASS END=173446553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 173446554 . T . PASS END=173446554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 173446555 . C . PASS END=173446577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,878:0,75,255:25,0 chr1 173446578 . T . PASS END=173446578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 173446579 . G . PASS END=173446613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,61,255:26,0 chr1 173446614 . C . PASS END=173446631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 173450465 . A . PASS END=173450466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:12,0 chr1 173450467 . G . PASS END=173450467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 173450468 . G . PASS END=173450468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 173450469 . G . PASS END=173450469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr1 173450470 . G . PASS END=173450471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 173450472 . A . PASS END=173450472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 173450473 . T . PASS END=173450477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 173450478 . T . PASS END=173450498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,545:0,45,255:18,0 chr1 173450499 . A . PASS END=173450546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,731:0,60,255:26,0 chr1 173450547 . G . PASS END=173450548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1011:0,87,255:29,0 chr1 173450549 . A . PASS END=173450549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 173450550 . T . PASS END=173450557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1025:0,87,255:29,0 chr1 173450558 . G . PASS END=173450600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 173450601 . G . PASS END=173450618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 173450619 . A . PASS END=173450621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 173454500 . G . PASS END=173454502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,690:0,44,255:19,0 chr1 173454503 . A . PASS END=173454515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:24,0 chr1 173454516 . A . PASS END=173454518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 173454519 . G . PASS END=173454519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 173454520 . T . PASS END=173454521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 173454522 . A . PASS END=173454522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:28,0 chr1 173454523 . A . PASS END=173454534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1040:0,87,255:33,0 chr1 173454535 . A . PASS END=173454535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1214:0,72,255:32,0 chr1 173454536 . A . PASS END=173454548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1201:0,86,255:38,0 chr1 173454549 . C . PASS END=173454549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:38,0 chr1 173454550 . C . PASS END=173454636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1260:0,90,255:40,0 chr1 173454637 . A . PASS END=173454637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:28,0 chr1 173454638 . G . PASS END=173454640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 173454641 . C . PASS END=173454646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:25,0 chr1 173455394 . G . PASS END=173455396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 173455397 . T . PASS END=173455400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 173455401 . T . PASS END=173455412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr1 173455413 . A . PASS END=173455414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1022:0,68,255:28,0 chr1 173455415 . A . PASS END=173455417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:86:29:0,86,884:0,86,255:31,0 chr1 173455418 . A . PASS END=173455418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,882:0,76,255:30,0 chr1 173455419 . A . PASS END=173455428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1150:0,93,255:33,0 chr1 173455429 . G . PASS END=173455429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:36,0 chr1 173455430 . T . PASS END=173455510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1233:0,86,255:40,0 chr1 173455511 . A . PASS END=173455511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:27,0 chr1 173455512 . A . PASS END=173455516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 173455517 . G . PASS END=173455518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:26,0 chr1 173455519 . T . PASS END=173455524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 173455525 . C . PASS END=173455525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 173455526 . C . PASS END=173455526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 173455527 . C . PASS END=173455528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 173455529 . G . PASS END=173455530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,824:0,45,255:25,0 chr1 173455531 . T . PASS END=173455540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,923:0,64,255:25,0 chr1 173456874 . G . PASS END=173456877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 173456878 . G . PASS END=173456879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 173456880 . G . PASS END=173456880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 173456881 . A . PASS END=173456979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:30:0,90,1094:0,90,255:40,0 chr1 173456980 . T . PASS END=173456989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:41:0,87,1305:0,93,255:35,0 chr1 173456990 . A . PASS END=173456990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:27,0 chr1 173456991 . C . PASS END=173456999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:29,0 chr1 173457000 . T . PASS END=173457000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:24,0 chr1 173457001 . A . PASS END=173457002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1029:0,71,255:24,0 chr1 173470233 . T . PASS END=173470236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 173472405 . C . PASS END=173472465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:63:0,120,1800:0,173,255:40,0 chr1 173473483 . C . PASS END=173473520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:44:0,89,1607:0,89,255:40,0 chr1 173474386 . C . PASS END=173474470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,146,255:40,0 chr1 173475995 . C . PASS END=173476180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:93:39:0,93,1465:0,93,255:40,0 chr1 173478707 . C . PASS END=173478708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 173478709 . C . PASS END=173478734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1153:0,89,255:40,0 chr1 173478735 . T . PASS END=173478838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,120,1800:0,128,255:40,0 chr1 173486676 . C . PASS END=173486832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1168:0,89,255:40,0 chr1 173486833 . A . PASS END=173486836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:25,0 chr1 173486837 . T . PASS END=173486837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:23,0 chr1 173486838 . A . PASS END=173486843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 173490440 . A . PASS END=173490444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:57:0,99,1800:0,99,255:40,0 chr1 173490445 . C . PASS END=173490445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:77:57:0,77,1923:0,77,255:40,0 chr1 173490446 . C . PASS END=173490457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:83:54:0,83,1800:0,83,255:40,0 chr1 173490458 . A . PASS END=173490538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:50:0,93,1530:0,93,255:40,0 chr1 173493108 . C . PASS END=173493233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:44:0,119,1627:0,119,255:40,0 chr1 173493918 . C . PASS END=173494066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,102,1530:0,123,255:40,0 chr1 173495802 . C . PASS END=173495853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:80:0,120,1800:0,213,255:40,0 chr1 173499044 . C . PASS END=173499192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:87:44:0,87,1305:0,99,255:40,0 chr1 173499193 . T . PASS END=173499193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1288:0,62,255:29,0 chr1 173502748 . C . PASS END=173502936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:44:0,120,1800:0,121,255:40,0 chr1 173503623 . C . PASS END=173503821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:52:0,117,1755:0,135,255:40,0 chr1 173504969 . T . PASS END=173505066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,0:125:99:92:0,120,1800:0,238,255:40,0 chr1 173505067 . A . PASS END=173505088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:87:0,120,1800:0,229,255:40,0 chr1 173506081 . T . PASS END=173506090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,182,255:40,0 chr1 173506091 . T . PASS END=173506178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:67:0,120,1800:0,185,255:40,2 chr1 173516828 . C . PASS END=173516865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:76:0,120,1800:0,173,255:40,0 chr1 173516866 . T . PASS END=173516902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,166,255:40,0 chr1 173516903 . A G, 49.52 PASS DP=69;MQ=250.00;MQRankSum=7.117;ReadPosRankSum=2.172;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,32,0:0.464,0.000:69:19,13,0:18,19,0:48:84,0,50,1116,1315,2430:255,0,255:33,0:4.9517e+01,7.0410e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,19,14,18:16,21,13,19 chr1 173516904 . T . PASS END=173516923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:58:0,120,1800:0,135,255:40,0 chr1 173517528 . A . PASS END=173517539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,120,1800:0,132,255:40,0 chr1 173517540 . G A, 49.68 PASS DP=54;MQ=250.00;MQRankSum=6.227;ReadPosRankSum=2.094;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,25,0:0.472,0.000:53:17,10,0:11,15,0:48:84,0,50,865,1002,1867:255,0,255:28,0:4.9681e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,4,16,9:15,13,13,12 chr1 173517541 . A . PASS END=173517577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,132,255:40,0 chr1 173517578 . T . PASS END=173517691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:66:0,120,1800:0,180,255:40,0 chr1 173523872 . C . PASS END=173523953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:67:0,120,1800:0,163,255:40,0 chr1 173526479 . C . PASS END=173526647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:39:0,117,1437:0,117,255:40,0 chr1 173542321 . C . PASS END=173542464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:42:0,105,1575:0,116,255:40,0 chr1 173545800 . T . PASS END=173545899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:52:0,120,1800:0,123,255:40,0 chr1 173550986 . C . PASS END=173551147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:89:35:0,89,1241:0,89,255:40,0 chr1 173552645 . C . PASS END=173552665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,164,255:40,0 chr1 173552666 . T . PASS END=173552702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,167,255:40,0 chr1 173552703 . G A, 49.41 PASS DP=72;MQ=250.00;MQRankSum=7.267;ReadPosRankSum=4.227;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,33,0:0.458,0.000:72:22,16,0:17,17,0:48:84,0,50,1172,1386,2558:255,0,255:30,0:4.9408e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,26,14,19:18,21,17,16 chr1 173552704 . A . PASS END=173552761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:37:0,94,1575:0,94,255:40,0 chr1 173556804 . C . PASS END=173556969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:92:34:0,92,1324:0,92,255:40,0 chr1 173567043 . C . PASS END=173567171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:48:0,105,1575:0,105,255:40,0 chr1 173569256 . C . PASS END=173569356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,149,255:40,0 chr1 173570789 . C . PASS END=173570915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:92:36:0,92,1264:0,92,255:40,0 chr1 173572168 . A . PASS END=173572352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:45:0,120,1800:0,135,255:40,0 chr1 173572353 . T . PASS END=173572370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:49:0,84,1260:0,147,255:40,0 chr1 173579284 . T . PASS END=173579285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:33:0,88,1235:0,88,255:32,0 chr1 173579286 . A . PASS END=173579286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:30,0 chr1 173579287 . G . PASS END=173579287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 173579288 . T . PASS END=173579288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1107:0,77,255:34,0 chr1 173579289 . T . PASS END=173579292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:37:0,98,1365:0,98,255:37,0 chr1 173579293 . G . PASS END=173579293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1320:0,70,255:35,0 chr1 173579294 . G . PASS END=173579296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,103,1346:0,103,255:38,0 chr1 173579297 . T . PASS END=173579297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1316:0,68,255:35,0 chr1 173579298 . C . PASS END=173579354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:43:0,93,1505:0,93,255:40,0 chr1 173593926 . A . PASS END=173594064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:84:40:0,84,1332:0,84,255:40,0 chr1 173596204 . C . PASS END=173596204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:29,0 chr1 173596205 . T . PASS END=173596205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 173596206 . T . PASS END=173596219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1305:0,96,255:34,0 chr1 173596220 . A . PASS END=173596256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:34:0,88,1197:0,88,255:40,0 chr1 173596257 . A T, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.960;ReadPosRankSum=3.709;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,27,0:0.551,0.000:49:12,14,0:10,13,0:48:85,0,49,961,742,1709:255,0,255:21,0:5.0000e+01,7.0669e-05,5.2008e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,14,13:12,10,13,14:173596257 chr1 173596258 . A . PASS END=173596272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,127,255:40,0 chr1 173596273 . A G, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=3.617;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,29,0:0.580,0.000:50:11,15,0:10,14,0:47:85,0,48,1008,714,1723:255,0,255:20,0:5.0000e+01,7.9988e-05,5.0735e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,14,15:6,15,14,15:173596257 chr1 173596274 . T . PASS END=173596310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,133,255:40,0 chr1 173596311 . A . PASS END=173596442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:42:0,80,1404:0,80,255:40,0 chr1 173596443 . G . PASS END=173596443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1357:0,76,255:39,0 chr1 173596444 . A . PASS END=173596456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:41:0,92,1300:0,92,255:40,0 chr1 173604661 . A . PASS END=173604984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:39:0,101,1410:0,101,255:40,1 chr1 173605966 . C . PASS END=173605968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1200:0,83,255:32,2 chr1 173605969 . A . PASS END=173605969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1117:0,33,255:32,2 chr1 173605970 . A . PASS END=173605970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:33,0 chr1 173605971 . A . PASS END=173606141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:33:0,96,1199:0,99,255:40,0 chr1 173606142 . G . PASS END=173606175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:42:0,81,1215:0,122,255:40,0 chr1 173610818 . T . PASS END=173610822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,225,255:40,0 chr1 173615985 . C . PASS END=173616152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:84:39:0,84,1260:0,112,255:40,0 chr1 173628230 . C . PASS END=173628551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,111,1615:0,111,255:40,0 chr1 173628552 . C . PASS END=173628572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,108,1554:0,108,255:40,0 chr1 173645413 . A . PASS END=173645457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:76:0,120,1800:0,212,255:40,0 chr1 173684610 . A . PASS END=173684776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:28:0,80,1055:0,80,255:40,0 chr1 173684777 . C . PASS END=173684777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:78:44:0,78,1170:0,132,255:26,0 chr1 173684778 . C . PASS END=173684786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:28,0 chr1 173684787 . C . PASS END=173684793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:26,0 chr1 173685142 . G . PASS END=173685205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,120,1800:0,127,255:40,0 chr1 173702852 . G . PASS END=173702852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:24,0 chr1 173702853 . T . PASS END=173702859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 173702860 . A . PASS END=173702866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 173702867 . A . PASS END=173702867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 173702868 . C . PASS END=173702880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:30,0 chr1 173702881 . G . PASS END=173702881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 173702882 . A . PASS END=173702891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 173702892 . A . PASS END=173702892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:29,0 chr1 173702893 . C . PASS END=173703181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1141:0,84,255:40,0 chr1 173703182 . T . PASS END=173703182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:28,0 chr1 173703183 . A . PASS END=173703189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 173703190 . T . PASS END=173703191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 173703192 . C . PASS END=173703200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 173703201 . T . PASS END=173703209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,71,255:26,0 chr1 173703210 . A . PASS END=173703210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 173703211 . C . PASS END=173703211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 173703212 . C . PASS END=173703218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 173703219 . A . PASS END=173703220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1056:0,74,255:29,0 chr1 173703221 . A . PASS END=173703412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1117:0,80,255:40,0 chr1 173703413 . T . PASS END=173703413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:26,0 chr1 173703414 . A . PASS END=173703415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 173703416 . C . PASS END=173703416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:26,0 chr1 173703417 . T . PASS END=173703417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:26,0 chr1 173703418 . T . PASS END=173703418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 173703419 . T . PASS END=173703419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 173703420 . C . PASS END=173703420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 173703421 . A . PASS END=173703425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 173720903 . G . PASS END=173720903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr1 173720904 . T . PASS END=173720904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:27,0 chr1 173720905 . A . PASS END=173721032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1186:0,83,255:40,0 chr1 173721033 . T . PASS END=173721033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 173721034 . T . PASS END=173721034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 173721035 . C . PASS END=173721039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1170:0,75,255:26,0 chr1 173721040 . A . PASS END=173721040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 173721041 . A . PASS END=173721061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,67,255:26,0 chr1 173722352 . G . PASS END=173722446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:45:0,85,1368:0,85,255:40,0 chr1 173725062 . A . PASS END=173725163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:34:0,81,1215:0,101,255:40,0 chr1 173725164 . A . PASS END=173725169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:32:0,60,900:0,96,255:26,0 chr1 173725170 . C . PASS END=173725177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:25:0,45,855:0,45,255:19,0 chr1 173726115 . T . PASS END=173726115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,826:0,46,255:29,0 chr1 173726116 . T . PASS END=173726130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:32:0,92,1202:0,92,255:40,2 chr1 173726131 . T . PASS END=173726131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1625:0,75,255:40,2 chr1 173726132 . G . PASS END=173726278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:36:0,81,1215:0,103,255:40,0 chr1 173726279 . T . PASS END=173726282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr1 173726283 . T . PASS END=173726285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 173726286 . A . PASS END=173726298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr1 173735285 . G . PASS END=173735285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 173735286 . T . PASS END=173735286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:22:34:0,22,1022:0,22,255:29,0 chr1 173735287 . A . PASS END=173735296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1280:0,102,255:35,0 chr1 173735297 . A . PASS END=173735297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1054:0,55,255:32,0 chr1 173735298 . A . PASS END=173735418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:35:0,81,1215:0,87,255:40,0 chr1 173735419 . T . PASS END=173735428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:29:0,63,945:0,87,255:22,0 chr1 173743444 . G . PASS END=173743569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:39:0,87,1305:0,100,255:40,0 chr1 173743570 . C . PASS END=173743577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:63:34:0,63,945:0,64,255:24,0 chr1 173744773 . T . PASS END=173744777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 173744778 . C . PASS END=173744778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 173744779 . G . PASS END=173744803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,639:0,41,255:19,0 chr1 173744804 . G . PASS END=173744805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 173744806 . A . PASS END=173744806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 173744807 . C . PASS END=173744807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 173744808 . A . PASS END=173744808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 173744809 . C . PASS END=173744837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 173744838 . C . PASS END=173744964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1065:0,82,255:37,0 chr1 173744965 . C . PASS END=173744974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:26,0 chr1 173744975 . T . PASS END=173744981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:18,0 chr1 173751262 . G . PASS END=173751368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,116,1800:0,116,255:40,0 chr1 173754301 . G . PASS END=173754385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:44:0,99,1485:0,119,255:40,0 chr1 173769586 . T . PASS END=173769657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:78:0,120,1800:0,207,255:40,0 chr1 173772101 . C . PASS END=173772252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:31:0,80,1103:0,80,255:40,0 chr1 173772253 . T . PASS END=173772253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 173772254 . T . PASS END=173772264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1260:0,95,255:30,0 chr1 173772265 . T . PASS END=173772265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,94,255:25,0 chr1 173772266 . G . PASS END=173772277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1296:0,94,255:33,0 chr1 173772278 . T . PASS END=173772278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1111:0,47,255:31,0 chr1 173772279 . T . PASS END=173772279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1099:0,71,255:32,0 chr1 173772280 . T . PASS END=173772608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:32:0,84,1220:0,94,255:40,0 chr1 173772609 . C . PASS END=173772640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,61,255:26,0 chr1 173772641 . A . PASS END=173772643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr1 173776405 . C . PASS END=173776454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,682:0,65,255:26,0 chr1 173776455 . G . PASS END=173776471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:30,0 chr1 173776472 . T . PASS END=173776472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 173776473 . T . PASS END=173776473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:30,0 chr1 173776474 . G . PASS END=173776633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:31:0,87,1305:0,87,255:40,0 chr1 173776634 . A . PASS END=173776634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 173776635 . C . PASS END=173776642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,85,255:27,0 chr1 173776643 . G . PASS END=173776644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 173776645 . G . PASS END=173776647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 173776648 . A . PASS END=173776656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,934:0,70,255:26,0 chr1 173780270 . C . PASS END=173780421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1260:0,105,255:40,0 chr1 173780422 . C . PASS END=173780437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,947:0,60,255:26,0 chr1 173793825 . C . PASS END=173793825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 173793835 . G . PASS END=173793835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 173793846 . G . PASS END=173793846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 173793880 . G . PASS END=173793880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 173794149 . C . PASS END=173794149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 173794221 . A . PASS END=173794221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 173794368 . A . PASS END=173794372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr1 173794373 . C . PASS END=173794373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 173794374 . T . PASS END=173794374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 173794375 . T . PASS END=173794489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1066:0,80,255:40,0 chr1 173794490 . T . PASS END=173794490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 173794491 . C . PASS END=173794495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 173795821 . A . PASS END=173795821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 173795825 . A . PASS END=173795849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:41:0,90,1289:0,90,255:40,0 chr1 173795850 . C . PASS END=173795924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:36:0,90,1313:0,90,255:40,0 chr1 173797449 . T . PASS END=173797449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:21:46:0,21,1312:0,21,255:35,0 chr1 173797450 . T . PASS END=173797450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:45:0,96,1479:0,96,255:35,1 chr1 173797454 . C . LowGQ END=173797454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,8:46:0:46:0,0,1086:31,0,255:35,0 chr1 173797458 . C . PASS END=173797458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:52:47:0,52,1391:0,52,255:40,0 chr1 173797461 . C . LowGQ END=173797461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,7:47:0:47:0,0,1235:26,0,255:40,0 chr1 173797471 . G . PASS END=173797471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 173797472 . C . LowGQ END=173797476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,12:49:0:48:0,0,1147:6,0,255:40,0 chr1 173797477 . C . PASS END=173797477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:42:51:0,42,1629:0,42,255:40,0 chr1 173797478 . A . LowGQ END=173797478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,8:51:0:51:0,0,1311:16,0,255:40,0 chr1 173797479 . C . PASS END=173797479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:39:51:0,39,1526:0,39,255:40,0 chr1 173797480 . A . LowGQ END=173797480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,7:51:0:51:0,0,1321:0,0,255:40,0 chr1 173797481 . T . PASS END=173797481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:25:53:0,25,1467:0,25,255:40,0 chr1 173797482 . T . LowGQ END=173797482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,9:54:0:54:0,0,1192:91,0,255:40,0 chr1 173797483 . C . PASS END=173797483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:28:54:0,28,1556:0,28,255:40,0 chr1 173797484 . T . LowGQ END=173797484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,7:54:0:54:0,0,1535:21,0,255:40,0 chr1 173797485 . T . PASS END=173797485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:37:54:0,37,1662:0,37,255:40,0 chr1 173797486 . G . PASS END=173797487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:54:0,98,1724:0,98,255:40,0 chr1 173797488 . T . PASS END=173797488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:43:55:0,43,1615:0,43,255:40,0 chr1 173797489 . C . PASS END=173797489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:93:55:0,93,1823:0,93,255:40,0 chr1 173797490 . C . PASS END=173797490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:32:55:0,32,1693:0,32,255:40,0 chr1 173797491 . T . LowGQ END=173797492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:0:55:0,0,1543:0,0,255:40,0 chr1 173797493 . A . PASS END=173797493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:43:55:0,43,1659:0,43,255:40,0 chr1 173797494 . G . PASS END=173797494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 173797495 . A . PASS END=173797495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,8:55:18:55:0,18,1526:0,18,255:40,0 chr1 173797496 . G . PASS END=173797496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:55:0,120,1800:0,132,255:40,0 chr1 173797497 . A . LowGQ END=173797497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:0:55:0,0,1536:1,0,255:40,0 chr1 173797498 . T . PASS END=173797498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:49:55:0,49,1868:0,49,255:40,0 chr1 173797499 . T . PASS END=173797499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:70:55:0,70,1693:0,70,255:40,0 chr1 173797500 . T . PASS END=173797500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:82:56:0,82,1817:0,82,255:40,0 chr1 173797501 . C . PASS END=173797501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:66:56:0,66,1791:0,66,255:40,0 chr1 173797502 . G . PASS END=173797502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,151,255:40,0 chr1 173797503 . A . PASS END=173797503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,7:56:16:56:0,16,1574:0,16,255:40,0 chr1 173797504 . T . PASS END=173797509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:80:56:0,80,1784:0,80,255:40,0 chr1 173797510 . T . LowGQ END=173797510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,8:57:0:57:0,0,1640:20,0,255:40,0 chr1 173797511 . G . PASS END=173797514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,101,1697:0,101,255:40,0 chr1 173797515 . A . PASS END=173797515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:1:53:0,1,1521:0,1,255:40,0 chr1 173797516 . A . PASS END=173797516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:64:49:0,64,1525:0,64,255:40,0 chr1 173797517 . G . PASS END=173797517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,130,255:40,0 chr1 173797518 . T . PASS END=173797518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:69:49:0,69,1625:0,69,255:40,0 chr1 173797519 . T . PASS END=173797519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:55:48:0,55,1476:0,55,255:39,0 chr1 173797520 . A . PASS END=173797520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:94:47:0,94,1657:0,94,255:40,0 chr1 173797521 . T . PASS END=173797521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:71:47:0,71,1501:0,71,255:40,0 chr1 173797522 . C . PASS END=173797522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:39,0 chr1 173797523 . A . PASS END=173797523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:53:47:0,53,1458:0,53,255:38,0 chr1 173797524 . T . PASS END=173797526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,99,1578:0,99,255:40,0 chr1 173797527 . C . PASS END=173797527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:55:45:0,55,1434:0,55,255:38,0 chr1 173797528 . C . PASS END=173797528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1466:0,63,255:37,0 chr1 173797529 . C . PASS END=173797529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,108,1620:0,118,255:35,0 chr1 173797530 . A . PASS END=173797530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:57:45:0,57,1407:0,57,255:36,0 chr1 173797531 . G . PASS END=173797537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:44:0,99,1578:0,99,255:40,0 chr1 173799798 . T . PASS END=173799800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 173799801 . G . PASS END=173799801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 173799802 . C . PASS END=173799807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:26,0 chr1 173799808 . C . PASS END=173799808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 173799809 . T . PASS END=173799810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,925:0,64,255:27,0 chr1 173799811 . T . PASS END=173799814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 173799815 . G . PASS END=173799815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 173799816 . A . PASS END=173799816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 173799817 . A . PASS END=173799818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1008:0,71,255:28,0 chr1 173799819 . A . PASS END=173799820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 173799821 . T . PASS END=173799821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,843:0,37,255:27,0 chr1 173799822 . T . PASS END=173799824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 173799825 . T . PASS END=173799825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 173799826 . G . PASS END=173799865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1286:0,90,255:37,0 chr1 173799866 . A . PASS END=173799866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:30,0 chr1 173799867 . G . PASS END=173799888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,89,255:32,0 chr1 173799889 . A . PASS END=173799898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,84,255:26,0 chr1 173799899 . A . PASS END=173799899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:22,0 chr1 173799901 . T . PASS END=173799901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,901:0,32,255:22,0 chr1 173800673 . A . PASS END=173800768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,105,1575:0,131,255:40,0 chr1 173800770 . T . PASS END=173800770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,105,1575:0,150,255:35,0 chr1 173802513 . G . PASS END=173802516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1247:0,86,255:35,0 chr1 173802517 . A . PASS END=173802517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1213:0,72,255:35,0 chr1 173802518 . C . PASS END=173802637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:37:0,90,1266:0,90,255:40,0 chr1 173803611 . G . PASS END=173803657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,206,255:40,0 chr1 173806078 . G . PASS END=173806079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,927:0,81,255:28,0 chr1 173806080 . T . PASS END=173806080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 173806081 . G . PASS END=173806099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1003:0,84,255:31,0 chr1 173806100 . C . PASS END=173806100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 173806101 . A . PASS END=173806148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:34,0 chr1 173806149 . G . PASS END=173806149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 173806150 . T . PASS END=173806150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 173806151 . T . PASS END=173806151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 173806152 . T . PASS END=173806155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 173806156 . C . PASS END=173806165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 173806166 . T . PASS END=173806166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:23,0 chr1 173806167 . G . PASS END=173806184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,812:0,62,255:26,0 chr1 173807328 . A . PASS END=173807397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,136,255:40,0 chr1 173808505 . A . PASS END=173808505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 173808506 . T . PASS END=173808507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 173808508 . G . PASS END=173808641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:31:0,83,1156:0,83,255:40,0 chr1 173808642 . C . PASS END=173808653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1035:0,61,255:26,1 chr1 173808654 . T . PASS END=173808654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:23,0 chr1 173808655 . G . PASS END=173808678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:23,0 chr1 173808679 . A . PASS END=173808684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 173808690 . T . PASS END=173808690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 173810004 . A . PASS END=173810111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,105,1460:0,111,255:40,0 chr1 173814367 . A . PASS END=173814430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:93:0,120,1800:0,255,255:40,0 chr1 173819465 . G . PASS END=173819465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 173819466 . A . PASS END=173819466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 173819467 . A . PASS END=173819468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr1 173819469 . T . PASS END=173819469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:25,0 chr1 173819470 . C . PASS END=173819470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 173819471 . T . PASS END=173819471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 173819472 . T . PASS END=173819472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:25,0 chr1 173819473 . A . PASS END=173819473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr1 173819474 . C . PASS END=173819474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 173819475 . C . PASS END=173819515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1215:0,84,255:40,0 chr1 173819516 . G . PASS END=173819516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1512:0,63,255:40,0 chr1 173819517 . C . PASS END=173819617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:34:0,84,1260:0,95,255:40,0 chr1 173820974 . A . PASS END=173821078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:41:0,92,1459:0,92,255:40,1 chr1 173822487 . T . PASS END=173822495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 173822496 . T . PASS END=173822496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:16,0 chr1 173822497 . T . PASS END=173822512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 173822513 . G . PASS END=173822513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 173822514 . G . PASS END=173822527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr1 173822528 . T . PASS END=173822531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 173822532 . G . PASS END=173822533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 173822534 . A . PASS END=173822539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 173822540 . A . PASS END=173822540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 173822541 . G . PASS END=173822541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 173822542 . G . PASS END=173822551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 173822552 . C . PASS END=173822554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 173822555 . T . PASS END=173822561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 173822562 . A . PASS END=173822575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 173822576 . C . PASS END=173822576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 173822577 . C . PASS END=173822579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 173822580 . T . PASS END=173822580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 173822581 . G . PASS END=173822592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 173822593 . T . PASS END=173822593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 173822594 . C . PASS END=173822598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 173822599 . T . PASS END=173822599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 173822600 . C . PASS END=173822601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 173822602 . T . PASS END=173822602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 173822603 . C . PASS END=173822623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 173822624 . C . PASS END=173822624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 173822625 . A . PASS END=173822635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,786:0,66,255:23,0 chr1 173822636 . A . PASS END=173822636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 173822637 . T . PASS END=173822650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 173822651 . A . PASS END=173822651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 173822652 . T . PASS END=173822663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 173822664 . C . PASS END=173822668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 173822669 . C . PASS END=173822669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,681:0,8,255:17,0 chr1 173822670 . A . PASS END=173822676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:18,0 chr1 173822677 . T . PASS END=173822677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 173822678 . A . PASS END=173822680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 173822681 . T . PASS END=173822687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:18:0,33,495:0,54,255:13,0 chr1 173822688 . T . PASS END=173822693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,630:0,45,255:14,0 chr1 173822694 . G . PASS END=173822704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 173822705 . G . PASS END=173822705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 173822710 . C . PASS END=173822710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 173822933 . G . PASS END=173823043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,140,255:40,0 chr1 173825804 . G . PASS END=173825860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:59:0,112,1800:0,112,255:40,2 chr1 173825861 . C . PASS END=173825897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,102,1449:0,104,255:40,0 chr1 173825898 . T G, 50.00 PASS DP=40;MQ=249.68;MQRankSum=4.678;ReadPosRankSum=0.318;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,27,0:0.675,0.000:40:7,16,0:6,11,0:41:85,0,39,958,465,1423:255,0,255:12,0:5.0000e+01,3.0935e-04,4.2132e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,10,8,19:5,8,13,14 chr1 173825899 . A . PASS END=173825902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:35,0 chr1 173826656 . G . PASS END=173826657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 173826658 . T . PASS END=173826658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1009:0,51,255:29,0 chr1 173826659 . T . PASS END=173826661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:31,0 chr1 173826662 . A . PASS END=173826662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:30,0 chr1 173826663 . C . PASS END=173826843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:93:31:0,93,1186:0,93,255:40,0 chr1 173826995 . A . PASS END=173826995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,206,255:40,0 chr1 173827011 . C . PASS END=173827011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 173827274 . G . PASS END=173827274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 173827430 . G . PASS END=173827430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 173827487 . G . PASS END=173827487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 173827496 . T . PASS END=173827496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 173839364 . A . PASS END=173839402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:30,0 chr1 173839403 . T . PASS END=173839403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 173839404 . T . PASS END=173839598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:30:0,89,1141:0,89,255:40,0 chr1 173839599 . T . PASS END=173839599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:32,0 chr1 173839600 . T . PASS END=173839617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1217:0,86,255:34,0 chr1 173839618 . T . PASS END=173839618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr1 173839619 . T . PASS END=173839628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,102,255:31,0 chr1 173839629 . C . PASS END=173839638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:34:0,63,945:0,81,255:26,0 chr1 173839639 . A . PASS END=173839639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1140:0,50,255:25,0 chr1 173839640 . T . PASS END=173839640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 173839641 . G . PASS END=173839642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 173839643 . C . PASS END=173839646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1016:0,71,255:27,0 chr1 173839647 . A . PASS END=173839647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 173839648 . A . PASS END=173839664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,954:0,78,255:26,0 chr1 173839665 . G . PASS END=173839665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 173839666 . C . PASS END=173839666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 173839667 . T . PASS END=173839671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 173839672 . A . PASS END=173839672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 173839673 . A . PASS END=173839673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 173839674 . C . PASS END=173839674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 173839675 . A . PASS END=173839676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 173839677 . C . PASS END=173839677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 173839678 . T . PASS END=173839679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 173839680 . C . PASS END=173839680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 173839681 . C . PASS END=173839696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1027:0,87,255:29,0 chr1 173839697 . C . PASS END=173839697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:24,0 chr1 173839698 . A . PASS END=173839698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 173839699 . G . PASS END=173839701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 173839702 . T . PASS END=173839702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 173839703 . A . PASS END=173839711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1440:0,102,255:34,0 chr1 173839712 . A . PASS END=173839712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:31,0 chr1 173839713 . A . PASS END=173839922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1135:0,80,255:40,0 chr1 173839923 . T . PASS END=173839923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:28,0 chr1 173839924 . A . PASS END=173839925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 173839926 . G . PASS END=173839930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1080:0,77,255:29,0 chr1 173839931 . C . PASS END=173839933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 173839934 . G . PASS END=173839946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,86,255:26,0 chr1 173839947 . G . PASS END=173839952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 173839953 . A . PASS END=173839953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 173839954 . G . PASS END=173839957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 173839958 . A . PASS END=173839962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 173839963 . A . PASS END=173839963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:25,0 chr1 173839964 . C . PASS END=173839970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,976:0,68,255:26,0 chr1 173839971 . C . PASS END=173839981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 173839982 . A . PASS END=173839982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,914:0,51,255:29,0 chr1 173839983 . G . PASS END=173840290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:86:30:0,86,1103:0,86,255:40,0 chr1 173842605 . A . PASS END=173842616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 173842617 . C . PASS END=173842617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 173842618 . G . PASS END=173842618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 173842619 . G . PASS END=173842741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:29:0,83,1086:0,83,255:40,0 chr1 173842742 . G . PASS END=173842756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,67,255:26,0 chr1 173842757 . T . PASS END=173842767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:19,0 chr1 173854774 . G . PASS END=173854776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1070:0,87,255:29,0 chr1 173854777 . G . PASS END=173854777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 173854778 . A . PASS END=173854968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:29:0,80,989:0,80,255:40,0 chr1 173854969 . G . PASS END=173854969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 173854970 . G . PASS END=173854970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 173854971 . C . PASS END=173854971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1029:0,38,255:27,0 chr1 173854972 . A . PASS END=173854973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:28,0 chr1 173854974 . G . PASS END=173854996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1026:0,82,255:29,0 chr1 173854997 . T . PASS END=173854997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 173854998 . G . PASS END=173854998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 173854999 . G . PASS END=173855001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1064:0,76,255:26,0 chr1 173855002 . T . PASS END=173855003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 173855004 . T . PASS END=173855010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1055:0,74,255:26,0 chr1 173855011 . C . PASS END=173855054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1157:0,82,255:30,0 chr1 173855055 . C . PASS END=173855057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:28,1 chr1 173855058 . A . PASS END=173855066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:29,0 chr1 173855067 . C . PASS END=173855082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:25:0,72,1080:0,75,255:26,0 chr1 173855083 . A . PASS END=173855088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 173855089 . C . PASS END=173855095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 173855096 . G . PASS END=173855110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1007:0,87,255:31,0 chr1 173855111 . G . PASS END=173855111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 173855112 . C . PASS END=173855244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1219:0,86,255:40,0 chr1 173855245 . A . PASS END=173855257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,937:0,62,255:26,0 chr1 173855258 . A . PASS END=173855260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,65,255:19,0 chr1 173855261 . G . PASS END=173855262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,62,255:19,0 chr1 173873027 . T . PASS END=173873028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:19,0 chr1 173873029 . A . PASS END=173873033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 173873034 . A . PASS END=173873034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 173873035 . C . PASS END=173873040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 173873041 . G . PASS END=173873041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 173873042 . G . PASS END=173873042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 173873043 . T . PASS END=173873043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,742:0,55,255:22,0 chr1 173873044 . T . PASS END=173873182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1139:0,80,255:40,0 chr1 173873183 . T . PASS END=173873183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:27,0 chr1 173873184 . T . PASS END=173873188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:28,0 chr1 173873189 . G . PASS END=173873189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 173873190 . C . PASS END=173873192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1260:0,80,255:29,0 chr1 173873193 . T . PASS END=173873193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,88,255:25,0 chr1 173873194 . C . PASS END=173873199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 173873200 . T . PASS END=173873203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 173876588 . C . PASS END=173876598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1551:0,113,255:40,0 chr1 173876599 . C . PASS END=173876652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,108,1537:0,115,255:40,0 chr1 173876666 . C . PASS END=173876666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 173878685 . C . PASS END=173878685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 173878690 . C . PASS END=173878696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 173878697 . T . PASS END=173878697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 173878698 . T . PASS END=173878714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:18,0 chr1 173878715 . G . PASS END=173878717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 173878718 . C . PASS END=173878719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 173878720 . G . PASS END=173878726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 173878727 . A . PASS END=173878730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 173878731 . C . PASS END=173878741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 173878742 . C . PASS END=173878794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1002:0,81,255:36,0 chr1 173878795 . C . PASS END=173878831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1144:0,86,255:34,0 chr1 173878832 . T C, 160.90 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,19,0:0,19,0:111:199,114,0,1424,114,1424:255,114,0:0,0:1.6090e+02,1.1090e+02,0.0000e+00,4.5000e+02,1.4567e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,20:0,0,21,17 chr1 173878833 . T . PASS END=173878841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1227:0,88,255:35,0 chr1 173878842 . T . PASS END=173878842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:33,0 chr1 173878843 . C . PASS END=173878861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:34,0 chr1 173878862 . T C, 145.40 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,19,0:0,14,0:95:183,98,0,1221,98,1221:255,99,0:0,0:1.4540e+02,9.5395e+01,0.0000e+00,4.5000e+02,1.3017e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,17:0,0,16,17 chr1 173878863 . A . PASS END=173878874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:32,0 chr1 173878875 . C . PASS END=173878885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:32:0,63,945:0,89,255:25,0 chr1 173878886 . C . PASS END=173878886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 173878887 . T . PASS END=173878900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,77,255:26,0 chr1 173878901 . G . PASS END=173878903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:28,0 chr1 173878904 . C . PASS END=173878905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 173878906 . T . PASS END=173878907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 173878908 . G . PASS END=173878908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 173878909 . T . PASS END=173878909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 173878910 . G . PASS END=173878910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:27,0 chr1 173878911 . A . PASS END=173878912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:28,0 chr1 173878913 . G . PASS END=173878913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr1 173878914 . T . PASS END=173878914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 173878915 . C . PASS END=173878915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr1 173878916 . A . PASS END=173878916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 173878917 . T . PASS END=173878918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 173878919 . A . PASS END=173878919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 173878920 . C . PASS END=173878920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 173878921 . C . PASS END=173878921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:41:30:0,41,997:0,41,255:27,0 chr1 173878922 . T . PASS END=173878926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:32,0 chr1 173878927 . A . PASS END=173878927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:30,0 chr1 173878928 . G . PASS END=173878930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr1 173878931 . C . PASS END=173878931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,976:0,33,255:28,0 chr1 173878932 . A . PASS END=173878934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:33:0,88,1181:0,88,255:33,0 chr1 173878935 . T . PASS END=173878935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 173878936 . C . PASS END=173878936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1102:0,55,255:31,0 chr1 173878937 . A . PASS END=173878938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1279:0,89,255:34,0 chr1 173878939 . G . PASS END=173878939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1139:0,55,255:28,0 chr1 173878940 . C . PASS END=173878942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr1 173878943 . C . LowGQ END=173878943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,7:36:0:36:0,0,873:52,0,255:26,0 chr1 173878944 . T . PASS END=173878944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:31,0 chr1 173878945 . G . PASS END=173878947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1290:0,80,255:34,0 chr1 173878948 . T . PASS END=173878948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1213:0,64,255:31,0 chr1 173878949 . G . PASS END=173878950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 173878951 . C . PASS END=173878951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:11:36:0,11,1008:0,11,255:30,0 chr1 173878952 . T . PASS END=173878958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1199:0,94,255:36,0 chr1 173878959 . A . PASS END=173878959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1143:0,61,255:33,0 chr1 173878960 . C . PASS END=173878960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 173878961 . G . PASS END=173878961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1204:0,61,255:33,0 chr1 173878962 . C . PASS END=173878964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 173878965 . C . PASS END=173878966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:33:35:0,33,994:0,33,255:32,0 chr1 173878967 . A . PASS END=173878969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1215:0,105,255:35,0 chr1 173878970 . A . PASS END=173878971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:31,0 chr1 173878972 . G . PASS END=173878972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:32,0 chr1 173878973 . G . LowGQ END=173878973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,7:35:0:35:0,0,822:62,0,255:26,0 chr1 173878974 . A . PASS END=173878975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1114:0,88,255:33,0 chr1 173878976 . C . PASS END=173878976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1027:0,55,255:30,0 chr1 173878977 . T . PASS END=173878977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 173878978 . T . PASS END=173878978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1057:0,41,255:30,0 chr1 173878979 . G . PASS END=173878980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:33,0 chr1 173878981 . C . PASS END=173878981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,899:0,35,255:30,0 chr1 173878982 . T . PASS END=173878984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1122:0,99,255:33,0 chr1 173878985 . C . PASS END=173878985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:16:33:0,16,892:0,16,255:28,0 chr1 173878986 . T . PASS END=173878987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1272:0,102,255:36,0 chr1 173878988 . G . PASS END=173878988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:33:38:0,33,1117:0,33,255:34,0 chr1 173878989 . T . PASS END=173878990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1402:0,98,255:37,0 chr1 173878991 . C . PASS END=173878991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1099:0,64,255:34,0 chr1 173878992 . A . PASS END=173878993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:83:38:0,83,1215:0,83,255:36,0 chr1 173878994 . C . PASS END=173878994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1119:0,50,255:33,0 chr1 173878995 . A . PASS END=173878997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1226:0,100,255:37,0 chr1 173878998 . G . PASS END=173878998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1158:0,67,255:34,0 chr1 173878999 . A . PASS END=173879024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:37:0,80,1095:0,80,255:38,0 chr1 173879025 . T . PASS END=173879047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1208:0,83,255:32,0 chr1 173879048 . G . PASS END=173879050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 173879051 . C . PASS END=173879051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 173879052 . T . PASS END=173879074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,71,255:25,0 chr1 173879075 . C . PASS END=173879080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 173879892 . C . PASS END=173879892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 173879893 . T . PASS END=173879893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr1 173879894 . T . PASS END=173880018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:29:0,80,1111:0,80,255:40,0 chr1 173880019 . T . PASS END=173880019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 173880020 . C . PASS END=173880020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 173880021 . T . PASS END=173880021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 173880022 . G . PASS END=173880022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 173880023 . C . PASS END=173880023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 173880024 . A . PASS END=173880024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:26,0 chr1 173880025 . T . PASS END=173880029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 173880936 . C . PASS END=173880949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 173880950 . G . PASS END=173881152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:30:0,87,1066:0,90,255:40,0 chr1 173883687 . G . PASS END=173883687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 173883691 . C . PASS END=173883727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:26,0 chr1 173883728 . A . PASS END=173883730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 173883731 . T . PASS END=173883731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 173883732 . T . PASS END=173883734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 173883735 . T . PASS END=173883735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 173883736 . C . PASS END=173883740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 173883741 . C . PASS END=173883741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 173883742 . A . PASS END=173883754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1006:0,83,255:33,0 chr1 173883755 . A . PASS END=173883755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:29,0 chr1 173883756 . T . PASS END=173883768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1332:0,92,255:31,0 chr1 173883769 . C . PASS END=173883769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 173883770 . A . PASS END=173883809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:34,0 chr1 173883810 . G . PASS END=173883810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 173883811 . C . PASS END=173883989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1182:0,86,255:37,0 chr1 173883990 . C . PASS END=173884007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,930:0,62,255:25,0 chr1 173884008 . T . PASS END=173884027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:18:0,40,637:0,40,255:19,0 chr1 173884028 . A . PASS END=173884028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 173884029 . T . PASS END=173884052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 173884053 . C . PASS END=173884058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 173885425 . A . PASS END=173885425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 173886357 . C . PASS END=173886397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,105,1800:0,105,255:40,2 chr1 173886454 . C . PASS END=173886454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 173886485 . C . PASS END=173886485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 173907859 . T . PASS END=173907870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:28:0,83,1017:0,83,255:33,0 chr1 173907871 . A . PASS END=173907871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:32,0 chr1 173907872 . C . PASS END=173907997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1215:0,99,255:40,0 chr1 173907998 . T . PASS END=173908012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:62:23:0,62,945:0,62,255:26,0 chr1 173910403 . C . PASS END=173910518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:51:0,120,1800:0,130,255:40,0 chr1 173912580 . C . PASS END=173912581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1194:0,93,255:32,0 chr1 173912582 . T . PASS END=173912582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 173912583 . A . PASS END=173912583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:31,0 chr1 173912584 . C . PASS END=173912584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:30,0 chr1 173912585 . T . PASS END=173912593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1186:0,96,255:36,0 chr1 173912594 . G . PASS END=173912594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:35,0 chr1 173912595 . T . PASS END=173912599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1193:0,92,255:36,0 chr1 173912600 . T . PASS END=173912600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1146:0,77,255:35,0 chr1 173912601 . C . PASS END=173912607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1327:0,95,255:37,0 chr1 173912608 . A . PASS END=173912608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1287:0,64,255:35,0 chr1 173912609 . T . PASS END=173912615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1313:0,95,255:37,0 chr1 173912616 . T . PASS END=173912616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr1 173912617 . T . PASS END=173912733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1127:0,82,255:40,0 chr1 173912734 . A . PASS END=173912734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr1 173912735 . C . PASS END=173912738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 173912739 . C . PASS END=173912753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,922:0,72,255:24,0 chr1 173915614 . C . PASS END=173915746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1089:0,81,255:40,0 chr1 173915884 . C . PASS END=173915965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,111,255:40,0 chr1 173915966 . G . PASS END=173915974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,86,255:26,0 chr1 173916507 . C . PASS END=173916510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 173916511 . A . PASS END=173916511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 173916512 . A . PASS END=173916527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1028:0,87,255:31,0 chr1 173916528 . T . PASS END=173916528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 173916529 . A . PASS END=173916701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1141:0,80,255:40,0 chr1 173916702 . T . PASS END=173916709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,990:0,99,255:24,0 chr1 173916710 . C . PASS END=173916720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:23:0,48,720:0,69,255:17,0 chr1 173921124 . C . PASS END=173921254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:81:40:0,81,1215:0,104,255:40,0 chr1 173921255 . C . PASS END=173921256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 173921257 . T . PASS END=173921265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:32:0,60,900:0,87,255:25,0 chr1 173921266 . T . PASS END=173921270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:42:31:0,42,630:0,60,255:18,0 chr1 173921271 . C . PASS END=173921276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:36:28:0,36,540:0,67,255:13,0 chr1 173930215 . T . PASS END=173930215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 173930216 . T . PASS END=173930216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 173930217 . C . PASS END=173930229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:26,0 chr1 173930230 . G . PASS END=173930230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:24,0 chr1 173930231 . G . PASS END=173930231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 173930232 . T . PASS END=173930232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 173930233 . A . PASS END=173930249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1011:0,84,255:34,0 chr1 173930250 . A . PASS END=173930250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr1 173930251 . A . PASS END=173930254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1252:0,105,255:35,0 chr1 173930255 . G . PASS END=173930255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr1 173930256 . C . PASS END=173930257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1255:0,56,255:35,0 chr1 173930258 . A . PASS END=173930368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1180:0,97,255:40,0 chr1 173930369 . C . PASS END=173930382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:23:0,66,990:0,68,255:23,0 chr1 173930863 . T . PASS END=173931223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:35:0,84,1260:0,85,255:40,0 chr1 173931224 . T . PASS END=173931233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:63:32:0,63,945:0,96,255:26,0 chr1 173933111 . C . PASS END=173933113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 173933114 . G . PASS END=173933121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:26,0 chr1 173933122 . G . PASS END=173933137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:31,0 chr1 173933138 . G . PASS END=173933138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 173933139 . C . PASS END=173933272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1035:0,80,255:37,0 chr1 173933273 . T . PASS END=173933303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,953:0,62,255:26,0 chr1 173933304 . A . PASS END=173933304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 173933305 . C . PASS END=173933315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 173933316 . A . PASS END=173933325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr1 173933977 . A . PASS END=173933977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 173933978 . G . PASS END=173933990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,808:0,62,255:26,0 chr1 173933991 . T . PASS END=173934213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:27:0,81,1024:0,81,255:40,0 chr1 173934214 . C . PASS END=173934221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:69:36:0,69,1035:0,108,255:24,0 chr1 173934222 . T . PASS END=173934224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:54:31:0,54,810:0,54,255:19,0 chr1 173934225 . T . PASS END=173934248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 173934249 . T . PASS END=173934249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:20,0 chr1 173934250 . T . PASS END=173934255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,725:0,63,255:22,0 chr1 173934256 . A . PASS END=173934256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,678:0,35,255:21,0 chr1 173934257 . A . PASS END=173934258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 173939643 . T . PASS END=173939744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1172:0,83,255:40,0 chr1 173939745 . T . PASS END=173939755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:25,0 chr1 173941647 . C . PASS END=173941765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:39:0,90,1334:0,90,255:40,0 chr1 173947626 . C . PASS END=173947626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 173947627 . T . PASS END=173947758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:28:0,83,1011:0,83,255:40,0 chr1 173949947 . C . PASS END=173949949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,832:0,61,255:25,0 chr1 173949950 . G . PASS END=173949950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 173949951 . T . PASS END=173949951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 173949952 . C . PASS END=173949954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:30,0 chr1 173949955 . T . PASS END=173949955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 173949956 . A . PASS END=173949956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 173949957 . A . PASS END=173949957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:29,0 chr1 173949958 . T . PASS END=173949959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 173949960 . G . PASS END=173949960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 173949961 . A . PASS END=173949964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:33,0 chr1 173949965 . C . PASS END=173949965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:32,0 chr1 173949966 . A . PASS END=173950128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,91,255:40,0 chr1 173950129 . C . PASS END=173950143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:25:0,66,990:0,70,255:24,0 chr1 173950144 . T . PASS END=173950147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 173951865 . C . PASS END=173951877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:18,0 chr1 173951878 . G . PASS END=173951880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 173951881 . C . PASS END=173951883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1235:0,102,255:34,0 chr1 173951884 . T . PASS END=173951884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:33,0 chr1 173951885 . A . PASS END=173951885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1180:0,85,255:33,0 chr1 173951886 . A . PASS END=173951886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1113:0,63,255:33,0 chr1 173951887 . A . PASS END=173952040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:34:0,84,1173:0,92,255:40,0 chr1 173952556 . C . PASS END=173952558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 173952559 . G . PASS END=173952560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 173952561 . C . PASS END=173952562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 173952563 . A . PASS END=173952576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:34,0 chr1 173952577 . C . PASS END=173952715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:97:38:0,97,1413:0,97,255:40,0 chr1 173952716 . T . PASS END=173952716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:65:46:0,65,1094:0,65,255:39,0 chr1 173952717 . T . PASS END=173952768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1185:0,80,255:40,0 chr1 173952769 . T . PASS END=173952778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,74,255:26,0 chr1 173952779 . G . PASS END=173952793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:19,0 chr1 173952794 . T . PASS END=173952795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 173953637 . C . PASS END=173953637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 173953638 . T . PASS END=173953638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:31,0 chr1 173953639 . C . PASS END=173953640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:34,0 chr1 173953641 . A . PASS END=173953641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:34,0 chr1 173953642 . G . PASS END=173953750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,95,255:40,0 chr1 173953751 . C . PASS END=173953757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,84,255:24,0 chr1 173961893 . C . PASS END=173961893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr1 173961894 . T . PASS END=173961894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr1 173961895 . G . PASS END=173961897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,742:0,66,255:23,0 chr1 173961898 . C . PASS END=173961898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 173961899 . A . PASS END=173961917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,787:0,61,255:26,0 chr1 173961918 . G . PASS END=173961921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,838:0,80,255:27,0 chr1 173961922 . A . PASS END=173961922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 173961923 . G . PASS END=173961923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 173961924 . T . PASS END=173961924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,731:0,9,255:24,0 chr1 173961925 . T . PASS END=173961925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 173961926 . C . PASS END=173961926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:26,0 chr1 173961927 . A . PASS END=173961927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 173961928 . C . PASS END=173961928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 173961929 . A . PASS END=173961929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr1 173961930 . G . PASS END=173961933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1005:0,84,255:29,0 chr1 173961934 . G . PASS END=173961935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 173961936 . A . PASS END=173961954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 173961955 . T . PASS END=173961955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:28,0 chr1 173961956 . A . PASS END=173961958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 173961959 . G . PASS END=173961960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1100:0,66,255:26,0 chr1 173961961 . T . PASS END=173961967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,82,255:27,0 chr1 173961968 . A . PASS END=173962015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,917:0,62,255:27,0 chr1 173962016 . A . PASS END=173962033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1202:0,83,255:30,0 chr1 173962034 . A . PASS END=173962034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,868:0,76,255:27,0 chr1 173962035 . C . PASS END=173962071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1164:0,93,255:33,0 chr1 173962072 . T . PASS END=173962088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 173962089 . A . PASS END=173962089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,821:0,45,255:22,0 chr1 173962090 . G . PASS END=173962098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:24,0 chr1 173962099 . T . PASS END=173962099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 173962100 . C . PASS END=173962115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 173962116 . A . PASS END=173962116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:22,0 chr1 173962117 . C . PASS END=173962123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:23,0 chr1 174188296 . A . PASS END=174188433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,101,1684:0,101,255:40,0 chr1 174190110 . A . PASS END=174190292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,114,1621:0,119,255:40,0 chr1 174190293 . T . PASS END=174190293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:77:50:0,77,1306:0,77,255:36,0 chr1 174190294 . C . PASS END=174190300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:49:0,81,1215:0,130,255:35,0 chr1 174190301 . A . PASS END=174190302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr1 174200283 . A . PASS END=174200283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr1 174200284 . A . PASS END=174200285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 174200286 . T . PASS END=174200286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 174200287 . T . PASS END=174200288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 174200289 . C . PASS END=174200290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr1 174200291 . A . PASS END=174200292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,953:0,62,255:25,0 chr1 174200293 . A . PASS END=174200293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 174200294 . C . PASS END=174200294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 174200295 . C . PASS END=174200295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 174200296 . C . PASS END=174200299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1023:0,74,255:27,0 chr1 174200300 . C . PASS END=174200300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 174200301 . C . PASS END=174200302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:32,0 chr1 174200303 . T . PASS END=174200303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1131:0,41,255:30,0 chr1 174200304 . C . PASS END=174200304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr1 174200305 . T . PASS END=174200306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1318:0,92,255:33,0 chr1 174200307 . C . PASS END=174200307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr1 174200308 . T . PASS END=174200308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 174200309 . C . PASS END=174200309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1257:0,64,255:34,0 chr1 174200310 . C . PASS END=174200490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:35:0,81,1215:0,83,255:40,0 chr1 174200491 . G . PASS END=174200493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:30:0,75,1125:0,90,255:25,0 chr1 174210621 . A . PASS END=174210795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:32:0,80,1185:0,80,255:40,0 chr1 174212120 . A . PASS END=174212140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:55:0,120,1800:0,155,255:40,0 chr1 174219613 . G . PASS END=174219613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 174219614 . T . PASS END=174219614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 174219615 . A . PASS END=174219617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 174219618 . C . PASS END=174219618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 174219619 . A . PASS END=174219686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:29:0,80,1161:0,80,255:40,0 chr1 174219687 . A . PASS END=174219723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:41:0,90,1418:0,90,255:40,0 chr1 174219724 . A G, 49.87 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=0.460;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:10,9,0:11,10,0:48:85,0,50,671,686,1357:255,0,255:21,0:4.9871e+01,6.6527e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,6,13:11,10,12,7 chr1 174219725 . G . PASS END=174219742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:32:0,80,1109:0,80,255:36,0 chr1 174219743 . A . PASS END=174219743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:28,0 chr1 174219744 . A . PASS END=174219746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 174219747 . A . PASS END=174219747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 174219748 . G . PASS END=174219749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 174219750 . C . PASS END=174219750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:26,0 chr1 174219751 . G . PASS END=174219751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 174219752 . A . PASS END=174219753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:52:30:0,52,968:0,52,255:26,0 chr1 174219754 . G . PASS END=174219756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 174219757 . A . PASS END=174219757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 174219758 . A . PASS END=174219758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 174219759 . A . PASS END=174219759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,906:0,29,255:26,0 chr1 174219760 . G . PASS END=174219760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 174219761 . G . PASS END=174219762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr1 174219763 . A . PASS END=174219763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 174219764 . A . PASS END=174219766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 174219767 . T . PASS END=174219767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 174219768 . T . PASS END=174219768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 174219769 . A . PASS END=174219769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 174219770 . G . PASS END=174219770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 174221582 . A . PASS END=174221728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:70:0,120,1800:0,194,255:40,0 chr1 174241552 . A . PASS END=174241618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:69:0,120,1800:0,191,255:40,0 chr1 174244971 . G . PASS END=174245073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:39:0,90,1647:0,90,255:40,0 chr1 174247751 . A . PASS END=174247753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 174247754 . A . PASS END=174247756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 174247757 . A . PASS END=174247757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 174247758 . A . PASS END=174247762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:34,0 chr1 174247763 . A . PASS END=174247763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr1 174247764 . C . PASS END=174247766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 174247767 . G . PASS END=174247767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 174247768 . A . PASS END=174247917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,99,1512:0,99,255:40,0 chr1 174274124 . T . PASS END=174274127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 174274128 . A . PASS END=174274128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 174274129 . G . PASS END=174274129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 174274130 . G . PASS END=174274130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 174274131 . G . PASS END=174274148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:34,0 chr1 174274149 . C . PASS END=174274149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1111:0,72,255:32,0 chr1 174274150 . T . PASS END=174274246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:35:0,88,1120:0,88,255:40,0 chr1 174274247 . G . PASS END=174274247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:29,0 chr1 174274248 . A . PASS END=174274255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 174274256 . G . PASS END=174274256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 174274257 . C . PASS END=174274265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 174340117 . A . PASS END=174340210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:52:0,120,1800:0,123,255:40,0 chr1 174363133 . G . PASS END=174363135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,933:0,75,255:26,0 chr1 174363136 . C . PASS END=174363143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 174363144 . T . PASS END=174363144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 174363145 . T . PASS END=174363164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1072:0,87,255:34,0 chr1 174363165 . T . PASS END=174363165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:33,0 chr1 174363166 . G . PASS END=174363248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:37,0 chr1 174363249 . C . PASS END=174363254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:24,0 chr1 174363255 . T . PASS END=174363273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,54,255:18,0 chr1 174363274 . T . PASS END=174363274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:16,0 chr1 174363275 . A . PASS END=174363279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 174363280 . A . PASS END=174363283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,37,255:12,0 chr1 174417250 . A . PASS END=174417268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1123:0,80,255:36,0 chr1 174417269 . C . PASS END=174417880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:39:0,107,1526:0,107,255:40,0 chr1 174417881 . T . PASS END=174417881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1315:0,79,255:40,0 chr1 174417882 . T . PASS END=174417999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1235:0,84,255:40,0 chr1 174418000 . T . PASS END=174418000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1091:0,71,255:27,0 chr1 174418001 . C . PASS END=174418004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1217:0,86,255:29,0 chr1 174418005 . C . PASS END=174418007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:67:34:0,67,1161:0,67,255:28,1 chr1 174418008 . A . PASS END=174418008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1099:0,44,255:27,0 chr1 174418009 . G . PASS END=174418009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 174418010 . A . PASS END=174418010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:26,0 chr1 174418011 . G . PASS END=174418011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 174418012 . A . PASS END=174418021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,70,255:25,0 chr1 174418022 . G . PASS END=174418023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:28,0 chr1 174418024 . C . PASS END=174418031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 174418032 . T . PASS END=174418039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:29,0 chr1 174418040 . C . PASS END=174418040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 174418041 . C . PASS END=174418043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1124:0,87,255:29,0 chr1 174418044 . G . PASS END=174418053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 174418054 . A . PASS END=174418328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1194:0,81,255:40,0 chr1 174418329 . C . PASS END=174418330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 174418331 . T . PASS END=174418333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 174418334 . G . PASS END=174418335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 174516975 . C . PASS END=174516980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:30,0 chr1 174516981 . A . PASS END=174516981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:30,0 chr1 174516982 . T . PASS END=174516982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 174516983 . G . PASS END=174516983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 174516984 . A . PASS END=174516989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 174516990 . A . PASS END=174516990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 174516991 . G . PASS END=174517193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:37:0,108,1344:0,111,255:40,0 chr1 174606513 . G . PASS END=174606626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,117,1800:0,117,255:40,0 chr1 174637937 . A G, 46.94 PASS DP=35;MQ=250.00;MQRankSum=4.933;ReadPosRankSum=2.845;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,14,0:0.400,0.000:35:12,6,0:9,8,0:46:82,0,50,501,751,1252:255,0,255:21,0:4.6940e+01,1.0950e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,8,6:9,12,10,4 chr1 174652660 . G . PASS END=174652734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,126,255:40,0 chr1 174668663 . A . PASS END=174668788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:46:0,102,1530:0,122,255:40,0 chr1 174670255 . A . PASS END=174670260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,201,255:40,0 chr1 174670281 . A . PASS END=174670283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,197,255:40,0 chr1 174671251 . G . PASS END=174671251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 174671252 . A . PASS END=174671253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 174671254 . C . PASS END=174671394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:30:0,83,1260:0,83,255:40,0 chr1 174674339 . A . PASS END=174674342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:36:0,69,1035:0,92,255:26,0 chr1 174674343 . G . PASS END=174674349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:37:0,60,900:0,111,255:26,0 chr1 174674350 . T . PASS END=174674365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:42:39:0,42,630:0,67,255:18,0 chr1 174674366 . G . PASS END=174674368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:33:38:0,33,495:0,114,255:11,0 chr1 174674369 . A . PASS END=174674369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:21:38:0,21,315:0,114,255:7,0 chr1 174674370 . T . PASS END=174674371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:15:38:0,15,225:0,114,255:5,0 chr1 174674372 . G . LowGQ END=174674383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:37,0:37:0:36:0,0,0:0,72,255:3,1 chr1 174721451 . G . PASS END=174721492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:80:0,120,1800:0,152,255:40,0 chr1 174769471 . A . PASS END=174769638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:29:0,80,1070:0,80,255:40,0 chr1 174780970 . A . PASS END=174781098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:41:0,87,1521:0,87,255:40,0 chr1 174846530 . G . PASS END=174846530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:23,0 chr1 174846531 . T . PASS END=174846531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,781:0,50,255:23,0 chr1 174846532 . G . PASS END=174846532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 174846533 . G . PASS END=174846562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:84:34:0,84,1260:0,88,255:40,0 chr1 174846633 . A . PASS END=174846743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:90:53:0,90,1350:0,143,255:40,0 chr1 174926594 . G . PASS END=174926613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:56:0,120,1800:0,151,255:40,0 chr1 174926614 . G . PASS END=174926614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:77:60:0,77,1777:0,77,255:40,0 chr1 174926615 . A . PASS END=174926622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:60:0,120,1800:0,125,255:40,0 chr1 174926623 . G . PASS END=174926623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,10:62:20:62:0,20,1536:0,20,255:40,0 chr1 174926624 . A . PASS END=174926629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,159,255:40,0 chr1 174926630 . T . PASS END=174926630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,11:67:17:67:0,17,1480:0,17,255:40,0 chr1 174926631 . A . PASS END=174926686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,140,255:40,0 chr1 174927028 . T . PASS END=174927042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,181,255:40,0 chr1 174927263 . A . PASS END=174927310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,177,255:40,0 chr1 174934084 . A . PASS END=174934122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:91:0,120,1800:0,238,255:40,0 chr1 174938414 . A . PASS END=174938524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:63:0,120,1800:0,180,255:40,0 chr1 174945215 . G . PASS END=174945235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,135,255:40,0 chr1 174945236 . T . PASS END=174945319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,108,1620:0,140,255:40,0 chr1 174947944 . C . PASS END=174948027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:99:54:0,120,1800:0,144,255:40,0 chr1 174951971 . A . PASS END=174952042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,110,1449:0,110,255:40,0 chr1 174957778 . G . PASS END=174957975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:36:0,90,1302:0,90,255:40,0 chr1 174958986 . G . PASS END=174959130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,964:0,84,255:40,0 chr1 174959131 . G . PASS END=174959131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 174959132 . C . PASS END=174959134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,95,255:27,0 chr1 174959135 . A . PASS END=174959138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:37:0,60,900:0,111,255:26,0 chr1 174962724 . G . PASS END=174962744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,108,1620:0,123,255:40,0 chr1 174969317 . A . PASS END=174969317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 174969318 . T . PASS END=174969320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 174969321 . C . PASS END=174969321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 174969322 . T . PASS END=174969331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 174973750 . C . PASS END=174973755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 174973756 . A . PASS END=174973756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,858:0,59,255:24,0 chr1 174973757 . A . PASS END=174973758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr1 174973759 . G . PASS END=174973776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,986:0,81,255:38,0 chr1 174973777 . G T, 50.00 PASS DP=38;MQ=183.85;MQRankSum=0.088;ReadPosRankSum=2.466;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,21,0:0.553,0.000:38:7,11,0:10,10,0:48:85,0,49,710,608,1318:255,0,255:17,0:5.0000e+01,6.9893e-05,5.2169e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,5,18,3:10,7,12,9 chr1 174973778 . T . PASS END=174973814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,100,1334:0,100,255:40,0 chr1 174973815 . T . PASS END=174973960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:87:31:0,87,1305:0,93,255:40,0 chr1 174973961 . G . PASS END=174973961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 174973962 . T . PASS END=174973969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 174975881 . G . PASS END=174975886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1313:0,108,255:38,0 chr1 174975887 . A . PASS END=174975887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:37,0 chr1 174975888 . T . PASS END=174975900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1393:0,101,255:40,0 chr1 174975901 . T . PASS END=174975901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:55:40:0,55,1118:0,55,255:37,0 chr1 174975902 . T . PASS END=174975975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,105,1415:0,105,255:40,0 chr1 174975976 . A . PASS END=174975976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1377:0,73,255:35,0 chr1 174975977 . G . PASS END=174975977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 174976234 . G . PASS END=174976333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:45:0,97,1605:0,97,255:40,1 chr1 174977745 . G . PASS END=174977842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,111,1406:0,111,255:40,0 chr1 174979059 . G . PASS END=174979215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:83:33:0,83,1180:0,83,255:40,0 chr1 174983805 . T . PASS END=174983814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 174983815 . G . PASS END=174983823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:22,0 chr1 174983824 . A . PASS END=174983824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 174983825 . T . PASS END=174983827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 174983828 . C . PASS END=174983828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 174983829 . A . PASS END=174983839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr1 174983840 . C . PASS END=174983841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:22,0 chr1 174983842 . T . PASS END=174983843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 174983844 . G . PASS END=174983844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 174983845 . T . PASS END=174983860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,986:0,75,255:26,0 chr1 174983861 . A . PASS END=174983987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:31:0,82,1133:0,82,255:40,0 chr1 174987554 . C . PASS END=174987712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1099:0,83,255:40,0 chr1 174992408 . C . PASS END=174992544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:32:0,84,1151:0,84,255:40,0 chr1 175042238 . A . PASS END=175042256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,156,255:40,0 chr1 175046520 . G . PASS END=175046527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 175046528 . G . PASS END=175046630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:28:0,80,1134:0,80,255:35,0 chr1 175046631 . C . PASS END=175046633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:24,0 chr1 175046634 . C . PASS END=175046668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr1 175046669 . C . PASS END=175046669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 175046670 . A . PASS END=175046683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 175046684 . C . PASS END=175046702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,881:0,67,255:27,0 chr1 175046703 . T . PASS END=175046719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:29,0 chr1 175046720 . G . PASS END=175046751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,64,255:26,0 chr1 175046752 . T . PASS END=175046757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,908:0,61,255:22,0 chr1 175046758 . T . PASS END=175046758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 175046759 . G . PASS END=175046770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 175046771 . T . PASS END=175046778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,776:0,52,255:21,0 chr1 175046779 . G . PASS END=175046779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 175046780 . G . PASS END=175046784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:18,0 chr1 175046785 . G . PASS END=175046788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 175046789 . A G, 50.00 PASS DP=23;MQ=249.57;MQRankSum=3.354;ReadPosRankSum=2.616;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,12,0:0.522,0.000:23:7,7,0:4,5,0:48:85,0,50,429,393,822:255,0,255:9,0:5.0000e+01,6.5751e-05,5.2906e+01,4.2919e+02,4.2800e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,9,8,4:6,5,7,5 chr1 175046790 . G . PASS END=175046790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 175046791 . G . PASS END=175046793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 175046794 . G . PASS END=175046794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 175046795 . G . PASS END=175046807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,886:0,69,255:25,0 chr1 175046808 . T . PASS END=175046808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:24,0 chr1 175046809 . C . PASS END=175046817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,969:0,75,255:25,0 chr1 175046818 . C . PASS END=175046818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 175046819 . A . PASS END=175046819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 175046820 . A . PASS END=175046820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 175046821 . C . PASS END=175046821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 175046822 . A . PASS END=175046826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 175046827 . C . PASS END=175046827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 175046828 . C . PASS END=175046835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 175046836 . G . PASS END=175046836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 175046837 . C . PASS END=175046844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 175046845 . G . PASS END=175046845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 175046846 . G . PASS END=175046846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175046847 . A . PASS END=175046847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 175046848 . C . PASS END=175046854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1133:0,87,255:30,0 chr1 175046855 . T . PASS END=175046855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,912:0,76,255:30,0 chr1 175046856 . T . PASS END=175046924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1135:0,83,255:36,0 chr1 175046925 . A . PASS END=175046928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,74,255:25,0 chr1 175046929 . G . PASS END=175046930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 175046931 . G . PASS END=175046931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 175046932 . T . PASS END=175046957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:19,0 chr1 175046958 . T . PASS END=175046963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 175048469 . A . PASS END=175048470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 175048471 . C . PASS END=175048474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 175048475 . G . PASS END=175048491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 175048492 . C . PASS END=175048501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 175048502 . T . PASS END=175048502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr1 175048503 . C . PASS END=175048515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:15,0 chr1 175048516 . T . PASS END=175048516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr1 175048517 . G . PASS END=175048521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 175048522 . T . PASS END=175048523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 175048524 . C . PASS END=175048525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 175048526 . A . PASS END=175048526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 175048527 . C . PASS END=175048543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 175048544 . A . PASS END=175048545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 175048546 . G . PASS END=175048576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:19,0 chr1 175048577 . G . PASS END=175048577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 175048578 . G . PASS END=175048600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr1 175048601 . G . PASS END=175048603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 175048604 . T . PASS END=175048621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,706:0,57,255:19,0 chr1 175048622 . G . PASS END=175048636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 175048637 . T . PASS END=175048637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 175048638 . G . PASS END=175048663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:23,0 chr1 175048664 . G . PASS END=175048664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,715:0,30,255:22,0 chr1 175048665 . C . PASS END=175048672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr1 175048673 . A . PASS END=175048673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:20,0 chr1 175048674 . C . PASS END=175048684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 175048685 . A . PASS END=175048687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 175048688 . G . PASS END=175048698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 175048699 . C . PASS END=175048699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 175048700 . G . PASS END=175048701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 175048702 . G . PASS END=175048706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:51:23:0,51,765:0,59,255:19,0 chr1 175048707 . G . PASS END=175048712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:20,0 chr1 175048713 . G . PASS END=175048713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 175048714 . T . PASS END=175048725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 175048726 . T . PASS END=175048726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 175048727 . T . PASS END=175048733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 175048734 . G . PASS END=175048746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 175048747 . G . PASS END=175048747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 175048748 . A . PASS END=175048826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 175048827 . C . PASS END=175048827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 175048828 . C . PASS END=175048831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 175048832 . A . PASS END=175048832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 175048833 . C . PASS END=175048833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 175048834 . T . PASS END=175048837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 175048838 . C . PASS END=175048839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 175048840 . C . PASS END=175048843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:11,0 chr1 175049299 . T . PASS END=175049299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 175049300 . G . PASS END=175049315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 175049316 . C . PASS END=175049325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 175049326 . T . PASS END=175049336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 175049337 . G . PASS END=175049341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:30,0 chr1 175049342 . T . PASS END=175049378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1094:0,89,255:39,0 chr1 175049379 . G A, 35.71 PASS DP=40;MQ=250.00;MQRankSum=4.944;ReadPosRankSum=2.258;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,12,0:0.300,0.000:40:16,6,0:12,6,0:36:70,0,50,429,981,1411:255,0,255:28,0:3.5713e+01,1.1876e-03,5.3001e+01,4.2924e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,17,4,8:13,15,6,6 chr1 175049380 . A . PASS END=175049416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1431:0,87,255:40,0 chr1 175049417 . G . PASS END=175049518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1260:0,90,255:40,0 chr1 175049519 . G . PASS END=175049519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 175049520 . A . PASS END=175049521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 175049522 . T . PASS END=175049522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 175049523 . G . PASS END=175049530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,898:0,86,255:30,0 chr1 175049531 . T . PASS END=175049535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 175049536 . G . PASS END=175049538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 175049539 . C . PASS END=175049545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 175049546 . T . PASS END=175049546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,984:0,56,255:26,0 chr1 175049547 . C . PASS END=175049547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175049548 . T . PASS END=175049548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr1 175049549 . A . PASS END=175049559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1039:0,71,255:26,0 chr1 175049560 . C . PASS END=175049562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 175052886 . A . PASS END=175052886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 175052887 . C . PASS END=175052887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 175052888 . C . PASS END=175052895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:24,0 chr1 175052896 . G . PASS END=175052914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:29,0 chr1 175052915 . A . PASS END=175052916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 175052917 . A . PASS END=175052918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 175052919 . A . PASS END=175052919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 175052920 . T . PASS END=175052920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 175052921 . G . PASS END=175052921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 175052922 . A . PASS END=175052924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 175052925 . C . PASS END=175052925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 175052926 . T . PASS END=175053023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1014:0,82,255:40,0 chr1 175053024 . T . PASS END=175053024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:30,0 chr1 175053025 . C . PASS END=175053033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,92,255:32,0 chr1 175053034 . C . PASS END=175053063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,909:0,62,255:25,0 chr1 175053064 . C . PASS END=175053064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 175053065 . A . PASS END=175053065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr1 175053066 . T . PASS END=175053066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 175053067 . C . PASS END=175053071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,56,255:18,0 chr1 175054541 . G . PASS END=175054544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 175054545 . G . PASS END=175054547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 175054548 . C T, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=1.091;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,11,0:0.524,0.000:21:8,2,0:2,9,0:48:85,0,50,393,321,714:255,0,255:10,0:5.0000e+01,6.6010e-05,5.2853e+01,3.9342e+02,3.5554e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,6,5:6,4,7,4 chr1 175054549 . C . PASS END=175054557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 175054558 . G . PASS END=175054558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 175054559 . A . PASS END=175054559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:22,0 chr1 175054560 . G . PASS END=175054560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 175054561 . T . PASS END=175054577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:25,0 chr1 175054578 . G . PASS END=175054583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:30,0 chr1 175054584 . G . PASS END=175054585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:29,0 chr1 175054586 . G . PASS END=175054603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1117:0,84,255:30,0 chr1 175054604 . A . PASS END=175054614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 175054615 . C . PASS END=175054619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 175054620 . T . PASS END=175054630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,941:0,67,255:26,0 chr1 175063126 . A . PASS END=175063135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:19,0 chr1 175063136 . T . PASS END=175063146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:22,0 chr1 175063147 . T . PASS END=175063147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,766:0,53,255:20,0 chr1 175063148 . T . PASS END=175063153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 175063154 . T . PASS END=175063154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 175063155 . G . PASS END=175063163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,848:0,62,255:24,0 chr1 175063164 . A . PASS END=175063355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1031:0,81,255:40,0 chr1 175063356 . G . PASS END=175063356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 175063357 . G . PASS END=175063371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 175063372 . A . PASS END=175063389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:25,0 chr1 175066553 . A . PASS END=175066571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:25,0 chr1 175066572 . C . PASS END=175066579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 175066580 . C . PASS END=175066581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 175066582 . G . PASS END=175066587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175066588 . G . PASS END=175066592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 175066593 . T . LowGQ END=175066593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,6:28:0:28:0,0,701:15,0,255:20,0 chr1 175066594 . G . PASS END=175066595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 175066596 . G . PASS END=175066597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 175066598 . A . PASS END=175066598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:26,0 chr1 175066599 . T . PASS END=175066616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 175066617 . G . PASS END=175066640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 175066641 . C . PASS END=175066641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 175066642 . A . PASS END=175066704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,861:0,62,255:26,0 chr1 175066705 . G . PASS END=175066715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:19,0 chr1 175066716 . C . PASS END=175066716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:19,0 chr1 175066717 . A . PASS END=175066717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 175066718 . C . PASS END=175066722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 175066723 . C . PASS END=175066723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 175066724 . T . PASS END=175066747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,847:0,69,255:23,0 chr1 175066748 . A . PASS END=175066748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:22,0 chr1 175066749 . G . PASS END=175066752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:23,0 chr1 175066753 . A . PASS END=175066771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:18:0,45,645:0,45,255:18,0 chr1 175066772 . A . PASS END=175066774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 175066775 . A . PASS END=175066781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 175066782 . C . PASS END=175066782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 175066783 . C . PASS END=175066786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 175066787 . A . PASS END=175066788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,572:0,37,255:16,0 chr1 175066789 . A . PASS END=175066797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 175066798 . G . PASS END=175066815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:11:0,30,418:0,33,255:12,0 chr1 175066816 . A . PASS END=175066816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 175066817 . C . PASS END=175066819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 175067468 . A . PASS END=175067470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 175067471 . T . PASS END=175067471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 175067472 . T . PASS END=175067484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:23,0 chr1 175067485 . A . PASS END=175067485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:22,0 chr1 175067486 . A . PASS END=175067489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr1 175067490 . G . PASS END=175067490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 175067491 . G . PASS END=175067501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,860:0,69,255:25,0 chr1 175067502 . G . PASS END=175067502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 175067503 . G . PASS END=175067507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 175067508 . A . PASS END=175067508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:20,0 chr1 175067509 . G . PASS END=175067509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 175067510 . A . PASS END=175067510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 175067511 . G . PASS END=175067546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,878:0,69,255:24,0 chr1 175067547 . C . PASS END=175067602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,674:0,44,255:19,0 chr1 175067603 . T . PASS END=175067618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 175067619 . G . PASS END=175067621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 175067622 . G . PASS END=175067641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 175067642 . G . PASS END=175067642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 175067643 . C . PASS END=175067643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 175067644 . C . PASS END=175067654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,859:0,81,255:27,0 chr1 175067655 . T . PASS END=175067657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 175067658 . G . PASS END=175067660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175067661 . G . PASS END=175067663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 175067664 . C . PASS END=175067664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,878:0,54,255:24,0 chr1 175067665 . A . PASS END=175067677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr1 175067678 . G . PASS END=175067678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 175067679 . G . PASS END=175067692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr1 175067693 . A . PASS END=175067693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 175067694 . C . PASS END=175067697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 175067698 . G . PASS END=175067728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,714:0,57,255:19,0 chr1 175067729 . C . PASS END=175067731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr1 175086075 . A . PASS END=175086076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 175086077 . A . LowGQ END=175086077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:13,0,146:5,0 chr1 175086078 . T . PASS END=175086082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 175086083 . A . LowGQ END=175086083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,161:12,0,173:5,0 chr1 175086084 . G . PASS END=175086092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 175086093 . A . PASS END=175086095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 175086096 . T . PASS END=175086100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 175086101 . A . PASS END=175086104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 175086105 . A . PASS END=175086105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 175086106 . C . PASS END=175086106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 175086107 . C . PASS END=175086107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 175086108 . G . PASS END=175086135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr1 175086136 . C . PASS END=175086136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 175086137 . T . PASS END=175086142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 175086143 . C . PASS END=175086161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:15,0 chr1 175086162 . A . PASS END=175086162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:14,0 chr1 175086163 . C . PASS END=175086164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 175086165 . G . PASS END=175086172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 175086173 . G . PASS END=175086174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 175086175 . G . PASS END=175086200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:24,0 chr1 175086201 . A . PASS END=175086201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,805:0,56,255:22,0 chr1 175086202 . G . PASS END=175086231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,922:0,72,255:24,0 chr1 175086232 . G . PASS END=175086291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1188:0,86,255:33,0 chr1 175086292 . C . PASS END=175086292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 175086293 . C . PASS END=175086308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 175086309 . A . PASS END=175086309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 175086310 . G . PASS END=175086316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 175086317 . A . PASS END=175086323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 175086324 . A . PASS END=175086325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175086326 . A . PASS END=175086326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 175086327 . C . PASS END=175086328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:27,0 chr1 175086329 . A . PASS END=175086341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 175087697 . A . PASS END=175087697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 175087698 . C . PASS END=175087698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 175087699 . A . PASS END=175087699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 175087700 . T . PASS END=175087713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,415:0,39,255:13,0 chr1 175087714 . A . PASS END=175087715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 175087716 . C . PASS END=175087716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 175087717 . C . PASS END=175087719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 175087720 . G . PASS END=175087728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,607:0,48,255:17,0 chr1 175087729 . T C, 50.00 PASS DP=17;MQ=224.84;MQRankSum=-3.512;ReadPosRankSum=0.625;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:4,5,0:4,4,0:48:85,0,50,322,286,608:255,0,255:8,0:5.0000e+01,6.5751e-05,5.2874e+01,3.2175e+02,3.2093e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,3,6:3,5,5,4 chr1 175087730 . G . PASS END=175087731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 175087732 . G . PASS END=175087732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 175087733 . T . PASS END=175087734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 175087735 . A . PASS END=175087735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 175087736 . C . PASS END=175087739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 175087740 . G . PASS END=175087766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,823:0,63,255:25,0 chr1 175087767 . G . PASS END=175087767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:24,0 chr1 175087768 . G . PASS END=175087788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1052:0,84,255:30,0 chr1 175087789 . T . PASS END=175087790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,986:0,70,255:26,0 chr1 175087791 . T . PASS END=175087841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1177:0,80,255:32,0 chr1 175087842 . G . PASS END=175087853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1158:0,90,255:32,0 chr1 175087854 . C . PASS END=175087854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr1 175087855 . A . PASS END=175087858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:29,0 chr1 175087859 . C . PASS END=175087883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:25,0 chr1 175087884 . C T, 36.86 PASS DP=26;MQ=201.50;MQRankSum=-3.700;ReadPosRankSum=2.081;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,7,0:0.269,0.000:26:10,1,0:9,6,0:37:72,0,47,172,172,172:193,0,255:16,0:3.6856e+01,9.3924e-04,5.0001e+01,1.7163e+02,2.0640e+02,1.7464e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,5,3,4:7,12,5,2:175087884 chr1 175087885 . A G, 36.86 PASS DP=26;MQ=201.50;MQRankSum=-3.700;ReadPosRankSum=1.387;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,7,0:0.269,0.000:26:10,1,0:9,6,0:37:72,0,47,172,172,172:193,0,255:14,0:3.6856e+01,9.3924e-04,5.0001e+01,1.7163e+02,2.0640e+02,1.7464e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,5,3,4:7,12,5,2:175087884 chr1 175087886 . T . PASS END=175087889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 175087890 . G . PASS END=175087894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:21,0 chr1 175087895 . C . PASS END=175087905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 175087906 . T . PASS END=175087908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 175087909 . G . PASS END=175087915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 175087916 . A . PASS END=175087916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 175087917 . G . PASS END=175087917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 175087918 . G . PASS END=175087927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 175087928 . A . PASS END=175087931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr1 175087932 . C . PASS END=175087939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 175087940 . C . PASS END=175087945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 175087946 . C . PASS END=175087947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 175087948 . A . PASS END=175087960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,458:0,39,255:13,0 chr1 175092536 . A . PASS END=175092539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 175092540 . T . PASS END=175092540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 175092541 . G . PASS END=175092548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 175092549 . C . PASS END=175092549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 175092550 . A . PASS END=175092568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,645:0,41,255:18,0 chr1 175092569 . G . PASS END=175092574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,799:0,63,255:22,0 chr1 175092575 . C . PASS END=175092575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 175092576 . G . PASS END=175092578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 175092579 . G . PASS END=175092579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 175092580 . A . PASS END=175092582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 175092583 . A . PASS END=175092584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,729:0,49,255:20,0 chr1 175092585 . G . PASS END=175092585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 175092586 . G . PASS END=175092586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 175092587 . C . PASS END=175092602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 175092603 . C . PASS END=175092606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 175092607 . G . PASS END=175092608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 175092609 . T . PASS END=175092609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 175092610 . C . PASS END=175092636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:26,0 chr1 175092637 . C . PASS END=175092638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 175092639 . C . PASS END=175092645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:28,0 chr1 175092646 . T . PASS END=175092646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 175092647 . C . PASS END=175092654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 175092655 . G . PASS END=175092655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 175092656 . G . PASS END=175092673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1231:0,90,255:33,0 chr1 175092674 . C T, 149.33 PASS DP=34;MQ=214.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:99:187,102,0,1318,102,1318:255,102,0:0,0:1.4933e+02,9.9331e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,18:0,0,20,14 chr1 175092675 . G . PASS END=175092711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1290:0,102,255:35,0 chr1 175092712 . C . PASS END=175092796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,83,255:38,0 chr1 175092797 . C . PASS END=175092799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 175096091 . A . PASS END=175096115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1189:0,88,255:35,0 chr1 175096116 . T . PASS END=175096116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 175096117 . C . PASS END=175096197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1255:0,89,255:40,0 chr1 175096198 . C . PASS END=175096201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1056:0,76,255:26,0 chr1 175096202 . T . PASS END=175096207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 175096208 . A . PASS END=175096208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 175096209 . T . PASS END=175096212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175096213 . A . PASS END=175096221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:25,0 chr1 175097168 . G . PASS END=175097284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:31:0,89,1014:0,89,255:39,0 chr1 175097285 . A . PASS END=175097289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 175097290 . C . PASS END=175097290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 175097291 . C . PASS END=175097294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 175097295 . C . PASS END=175097298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 175097299 . A . PASS END=175097300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 175097731 . T . PASS END=175097856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1215:0,87,255:40,0 chr1 175097857 . T . PASS END=175097872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:25,0 chr1 175097873 . T . PASS END=175097873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 175097874 . G . PASS END=175097876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 175097877 . T . PASS END=175097882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 175104981 . G . PASS END=175105077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,99,1485:0,114,255:40,0 chr1 175105957 . G . PASS END=175105957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 175105958 . A . PASS END=175105962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 175105963 . A . PASS END=175105964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 175105965 . A . PASS END=175105965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 175105966 . A . PASS END=175105979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:37,0 chr1 175105980 . A . PASS END=175106113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:37:0,84,1260:0,93,255:40,0 chr1 175106114 . A . PASS END=175106114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:27,0 chr1 175106115 . G . PASS END=175106124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,89,255:30,0 chr1 175113523 . G . PASS END=175113540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:34:0,99,1288:0,102,255:40,0 chr1 175113541 . A . PASS END=175113577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,112,1410:0,112,255:40,0 chr1 175113578 . T C, 203.02 PASS DP=53;MQ=250.00;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,19,0:0,33,0:153:241,156,0,341,341,341:255,156,0:0,0:2.0302e+02,1.5302e+02,0.0000e+00,3.3779e+02,3.7256e+02,3.4080e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,25,27:0,0,30,22 chr1 175113579 . G . PASS END=175113615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:53:0,120,1800:0,135,255:40,0 chr1 175113616 . G . PASS END=175113680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:43:0,87,1305:0,95,255:40,0 chr1 175113681 . A . PASS END=175113682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 175113683 . T . PASS END=175113685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:28,0 chr1 175113686 . G . PASS END=175113686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 175116067 . G . PASS END=175116070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1242:0,91,255:36,0 chr1 175116071 . T . PASS END=175116071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1239:0,56,255:35,0 chr1 175116072 . G . PASS END=175116075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:81:39:0,81,1275:0,81,255:39,0 chr1 175116076 . T . PASS END=175116076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1226:0,70,255:37,0 chr1 175116077 . G . PASS END=175116090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:96:40:0,96,1332:0,96,255:40,0 chr1 175116091 . G . PASS END=175116091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1376:0,68,255:39,0 chr1 175116092 . G . PASS END=175116097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:88:45:0,88,1399:0,88,255:40,0 chr1 175116098 . A . PASS END=175116127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:44:0,80,1394:0,80,255:40,0 chr1 175116128 . T . PASS END=175116128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1674:0,78,255:40,0 chr1 175116129 . C . PASS END=175116173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:38:0,81,1302:0,81,255:40,0 chr1 175116174 . G . PASS END=175116174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr1 175116175 . C . PASS END=175116202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1266:0,91,255:36,0 chr1 175116203 . T . PASS END=175116203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 175116204 . C . PASS END=175116204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 175116205 . T . PASS END=175116205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1109:0,65,255:29,0 chr1 175116206 . G . PASS END=175116207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:29,0 chr1 175129305 . T . PASS END=175129454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:98:42:0,98,1467:0,98,255:40,0 chr1 175129455 . C . PASS END=175129489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:61:0,120,1800:0,144,255:40,0 chr1 175129490 . T . PASS END=175129490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,4:62:31:62:0,31,2071:0,31,255:40,8 chr1 175129491 . T . LowGQ END=175129492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,10:68:0:66:0,0,1794:96,0,255:40,8 chr1 175129493 . T . PASS END=175129493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,4:64:60:64:0,60,2185:0,60,255:40,0 chr1 175129494 . G . PASS END=175129529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,145,255:40,0 chr1 175129530 . A . PASS END=175129653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,106,1582:0,106,255:40,0 chr1 175129654 . A . PASS END=175129690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:42:0,96,1458:0,96,255:40,0 chr1 175129691 . G T, 49.30 PASS DP=42;MQ=250.00;MQRankSum=5.509;ReadPosRankSum=1.794;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:13,10,0:10,9,0:48:84,0,50,680,778,1458:255,0,255:23,0:4.9304e+01,7.2740e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,10,9:12,11,13,6 chr1 175129692 . C . PASS END=175129728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:42:0,85,1345:0,85,255:40,0 chr1 175129729 . G . PASS END=175129766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:38:0,94,1606:0,94,255:40,0 chr1 175129850 . C . PASS END=175129861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1225:0,86,255:34,0 chr1 175129862 . T . PASS END=175129862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:28,0 chr1 175129863 . G . PASS END=175129872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:31:0,86,1201:0,86,255:30,0 chr1 175129873 . T . PASS END=175129873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:27,0 chr1 175129874 . C . PASS END=175129875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 175129876 . C . PASS END=175129876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:23,0 chr1 175129877 . C . PASS END=175129877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 175129878 . A . PASS END=175129893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:23,0 chr1 175129894 . G . PASS END=175129923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:27:0,42,630:0,62,255:19,0 chr1 175129924 . C . LowGQ END=175129934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:16,13:29:0:27:0,0,0:255,0,255:23,13 chr1 175129935 . T . PASS END=175129935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:24,0 chr1 175129936 . T . PASS END=175129936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:24,0 chr1 175129937 . C . PASS END=175129944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:25,0 chr1 175129945 . TC T, 49.93 PASS DP=26;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=0.571;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,12,0:0.480,0.000:25:8,8,0:5,4,0:47:58,0,47,158,158,158:0,78,255:25,0:4.9934e+01,8.7495e-05,5.0000e+01,1.8470e+02,1.9270e+02,1.8771e+02:0.00,8.00,11.01,34.77,42.77,37.78:6,7,7,5:7,6,5,7:175129945 chr1 175129946 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=-0.354;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,13,0:0.520,0.000:25:8,8,0:4,5,0:47:85,0,47,185,185,185:255,0,255:12,0:5.0000e+01,8.7495e-05,4.9934e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,5,6,7:5,7,7,6 chr1 175129947 . TTCTTCTTG T, 49.93 PASS DP=26;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=0.408;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,12,0:0.480,0.000:25:8,8,0:5,4,0:47:60,0,47,160,160,160:0,78,255:24,0:4.9934e+01,8.7495e-05,5.0000e+01,1.8470e+02,1.9470e+02,1.8771e+02:0.00,10.00,13.01,34.77,44.77,37.78:6,7,7,5:7,6,5,7:175129945 chr1 175129948 . T . PASS END=175129948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:24,0 chr1 175129949 . C . PASS END=175129949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 175129950 . T . PASS END=175129954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 175129955 . G . LowGQ END=175129955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,12:25:0:25:0,0,53:255,0,255:11,0 chr1 175129956 . T . PASS END=175129980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,908:0,72,255:26,0 chr1 175129981 . T . PASS END=175129994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1134:0,85,255:33,0 chr1 175129995 . C . PASS END=175130045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1186:0,81,255:37,0 chr1 175130046 . A . PASS END=175130046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1277:0,65,255:33,0 chr1 175130047 . G . PASS END=175130050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 175130051 . C . PASS END=175130051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 175130052 . A . PASS END=175130104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1088:0,83,255:37,0 chr1 175130105 . G . PASS END=175130105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 175130106 . A . PASS END=175130109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 175130110 . T . PASS END=175130110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 175130111 . G . PASS END=175130118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 175130119 . T . PASS END=175130131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:24,0 chr1 175130132 . G . PASS END=175130132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 175130133 . G . PASS END=175130135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 175130136 . C . PASS END=175130136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 175130137 . T . PASS END=175130139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 175130140 . T . PASS END=175130142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,49,255:19,0 chr1 175130143 . T . PASS END=175130143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,544:0,27,255:12,0 chr1 175130144 . C . PASS END=175130149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:20:0,33,495:0,60,255:13,0 chr1 175292493 . T . PASS END=175292612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:36:0,82,1335:0,82,255:40,0 chr1 175293492 . C . PASS END=175293494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 175293495 . A . PASS END=175293495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 175293496 . C . PASS END=175293497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 175293498 . G . PASS END=175293506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,997:0,81,255:30,0 chr1 175293507 . C . PASS END=175293507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr1 175293508 . T . PASS END=175293619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1141:0,80,255:40,0 chr1 175293620 . A . PASS END=175293623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,940:0,51,255:28,0 chr1 175293624 . A . PASS END=175293628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 175293629 . G . PASS END=175293640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,70,255:25,0 chr1 175293641 . A . PASS END=175293641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:21,0 chr1 175293642 . G . PASS END=175293642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 175293643 . C . PASS END=175293644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 175293645 . G . PASS END=175293655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,53,255:18,0 chr1 175299210 . C . PASS END=175299216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr1 175299217 . G . PASS END=175299217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 175299218 . C . PASS END=175299219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 175299220 . G . PASS END=175299227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 175299228 . T . PASS END=175299228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 175299229 . T . PASS END=175299236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 175299237 . G . PASS END=175299237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 175299238 . G . PASS END=175299238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 175299239 . A . PASS END=175299240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 175299241 . T . PASS END=175299241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,548:0,21,255:18,0 chr1 175299242 . T . PASS END=175299244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 175299245 . T . PASS END=175299245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,562:0,21,255:18,0 chr1 175299246 . A . PASS END=175299258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 175299259 . G . PASS END=175299261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 175299262 . C . PASS END=175299262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 175299263 . T . PASS END=175299263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 175299264 . C . PASS END=175299267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 175299268 . A . PASS END=175299268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 175299269 . G . PASS END=175299271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 175299272 . A . PASS END=175299272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,689:0,47,255:20,0 chr1 175299273 . A . PASS END=175299300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 175299301 . T C, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=2.202;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:4,8,0:7,5,0:48:85,0,50,436,361,797:255,0,255:11,0:5.0000e+01,6.6786e-05,5.2706e+01,4.3598e+02,3.9622e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,8,5:4,7,9,4 chr1 175299302 . T . PASS END=175299309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 175299310 . C . PASS END=175299310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 175299311 . C . PASS END=175299314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 175299315 . T . PASS END=175299315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 175299316 . G . PASS END=175299319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 175299320 . A . PASS END=175299320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 175299321 . C . PASS END=175299322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 175299323 . C . PASS END=175299337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,630:0,41,255:19,0 chr1 175299338 . C . PASS END=175299338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:12,0 chr1 175299339 . C . PASS END=175299345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,37,255:12,0 chr1 175299346 . T . PASS END=175299347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 175299348 . T . PASS END=175299350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 175299351 . T . PASS END=175299351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 175299352 . C . PASS END=175299352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 175299353 . C . PASS END=175299353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 175299354 . T . PASS END=175299361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 175299362 . T . PASS END=175299367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 175299368 . A . PASS END=175299368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 175299369 . G . PASS END=175299371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 175304847 . C . PASS END=175304943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,110,1535:0,110,255:40,0 chr1 175306664 . A . PASS END=175306664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 175306665 . A . PASS END=175306669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 175306670 . G . PASS END=175306670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 175306671 . C . PASS END=175306786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,1039:0,84,255:40,0 chr1 175306787 . G . PASS END=175306788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 175306789 . C . PASS END=175306801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:29,0 chr1 175306802 . G . PASS END=175306810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 175306811 . G . PASS END=175306815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 175323527 . C . PASS END=175323544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:24,0 chr1 175323545 . A . PASS END=175323548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 175323549 . G . PASS END=175323549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 175323550 . A . PASS END=175323555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:31,0 chr1 175323556 . C . PASS END=175323556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 175323557 . T . PASS END=175323659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1149:0,89,255:39,0 chr1 175324639 . C . PASS END=175324652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:25,0 chr1 175324653 . C . PASS END=175324653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 175324654 . G . PASS END=175324665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,953:0,75,255:26,0 chr1 175324666 . G . PASS END=175324685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 175324686 . T . PASS END=175324686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 175324687 . C . PASS END=175324750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1040:0,80,255:31,0 chr1 175324751 . T . PASS END=175324751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:29,0 chr1 175324752 . T . PASS END=175324759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 175324760 . G . PASS END=175324769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 175325455 . G . PASS END=175325598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,104,1385:0,104,255:40,0 chr1 175328748 . C . PASS END=175328867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,105,1396:0,105,255:40,0 chr1 175331799 . C . PASS END=175331942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1215:0,95,255:40,0 chr1 175331943 . C . PASS END=175331945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 175332844 . C . PASS END=175332963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1217:0,86,255:40,0 chr1 175334146 . C . PASS END=175334158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 175334159 . G . PASS END=175334174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:13,0 chr1 175334175 . G . PASS END=175334176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 175334177 . G . PASS END=175334177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 175334178 . G . PASS END=175334196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:19,0 chr1 175334197 . C . PASS END=175334197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 175334198 . C . PASS END=175334203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 175334204 . G . PASS END=175334213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:24,0 chr1 175334214 . T . PASS END=175334215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 175334216 . C . PASS END=175334216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 175334217 . T . PASS END=175334221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 175334222 . G . PASS END=175334222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 175334223 . G . PASS END=175334236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 175334237 . C . PASS END=175334246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1141:0,93,255:32,0 chr1 175334247 . G . PASS END=175334247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 175334248 . C . PASS END=175334310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1205:0,89,255:36,0 chr1 175334311 . A . PASS END=175334311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1242:0,72,255:34,0 chr1 175334312 . G . PASS END=175334403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1123:0,80,255:36,0 chr1 175334404 . T . PASS END=175334415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:25,0 chr1 175335011 . C . PASS END=175335015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 175335016 . A . PASS END=175335017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 175335018 . A . PASS END=175335022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 175335023 . C . PASS END=175335027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 175335028 . G . PASS END=175335028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 175335029 . T . PASS END=175335029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 175335030 . G . PASS END=175335030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 175335031 . G . PASS END=175335041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 175335042 . C . PASS END=175335092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:14:0,40,520:0,40,255:19,0 chr1 175335093 . C . PASS END=175335093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:19,0 chr1 175335094 . T . PASS END=175335095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:22,0 chr1 175335096 . T . PASS END=175335096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 175335097 . A . PASS END=175335104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 175335105 . T . PASS END=175335105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 175335106 . A . PASS END=175335111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 175335112 . T . PASS END=175335112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 175335113 . A . PASS END=175335125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:26,0 chr1 175335126 . C . PASS END=175335126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 175335127 . T . PASS END=175335127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:26,0 chr1 175335128 . T . PASS END=175335135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 175335136 . G . PASS END=175335198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,878:0,61,255:26,0 chr1 175335199 . C . PASS END=175335199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 175335200 . T . PASS END=175335229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,870:0,61,255:26,0 chr1 175335230 . T . PASS END=175335230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,730:0,42,255:22,0 chr1 175335231 . C . PASS END=175335235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 175335236 . A . PASS END=175335236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 175335237 . G . PASS END=175335237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 175335238 . G . PASS END=175335241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 175335242 . C . PASS END=175335245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 175335246 . C . PASS END=175335246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 175335247 . A . PASS END=175335255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,707:0,63,255:21,0 chr1 175335256 . T . PASS END=175335256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:20,0 chr1 175335257 . C . PASS END=175335263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 175335264 . A . PASS END=175335274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:18,0 chr1 175336344 . C . PASS END=175336433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:38:0,84,1260:0,112,255:40,0 chr1 175348688 . C . PASS END=175348693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 175348694 . G . PASS END=175348699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 175348700 . C . PASS END=175348705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 175348706 . T . PASS END=175348722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:30,0 chr1 175348723 . C T, 139.84 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,15,0:0,16,0:90:178,93,0,1162,93,1162:255,93,0:0,0:1.3984e+02,8.9841e+01,0.0000e+00,4.5000e+02,1.2461e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,10:0,0,15,16 chr1 175348724 . T . PASS END=175348760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1125:0,80,255:36,0 chr1 175348761 . G . PASS END=175348825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,102,1451:0,102,255:40,0 chr1 175348826 . T . PASS END=175348826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1313:0,51,255:37,0 chr1 175348827 . G . PASS END=175348873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,92,255:38,0 chr1 175355168 . C . PASS END=175355181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1023:0,81,255:30,0 chr1 175355182 . G . PASS END=175355182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 175355183 . T . PASS END=175355189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 175355190 . A . PASS END=175355250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1092:0,86,255:32,0 chr1 175355251 . C . PASS END=175355252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 175355253 . C . PASS END=175355253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 175355254 . A . PASS END=175355255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 175355256 . G . PASS END=175355256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 175355257 . G . PASS END=175355266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,80,255:26,0 chr1 175355267 . A . PASS END=175355273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,65,255:19,0 chr1 175355274 . G . PASS END=175355277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 175355278 . A . PASS END=175355278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 175355279 . G . PASS END=175355282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 175355283 . A . PASS END=175355283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 175355284 . G . PASS END=175355285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 175355286 . C . PASS END=175355286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 175355287 . T . PASS END=175355293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 175355294 . G . PASS END=175355294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 175355295 . G . PASS END=175355296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 175355297 . A . PASS END=175355301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 175355302 . G . PASS END=175355302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 175355303 . T . PASS END=175355329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,890:0,62,255:25,0 chr1 175355330 . C . PASS END=175355330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,768:0,42,255:23,0 chr1 175355331 . A . PASS END=175355331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 175355332 . T . PASS END=175355332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,679:0,19,255:23,0 chr1 175355333 . A . PASS END=175355333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:24,0 chr1 175355334 . T . PASS END=175355336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 175355337 . C . PASS END=175355337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 175355338 . A . PASS END=175355343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,791:0,62,255:25,0 chr1 175355344 . A . PASS END=175355344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,832:0,47,255:25,0 chr1 175355345 . T . PASS END=175355350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,846:0,61,255:26,0 chr1 175355351 . C . PASS END=175355353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:31,0 chr1 175355354 . C . PASS END=175355383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1141:0,86,255:32,0 chr1 175355384 . A . PASS END=175355385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:27,0 chr1 175355386 . G . PASS END=175355386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 175355387 . C . PASS END=175355387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 175355388 . C . PASS END=175355389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 175355390 . C . PASS END=175355390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 175355391 . A G, 133.82 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,13,0:0,16,0:84:172,87,0,1095,87,1095:255,87,0:0,0:1.3382e+02,8.3825e+01,0.0000e+00,4.5000e+02,1.1859e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,13:0,0,16,13 chr1 175355392 . G . PASS END=175355401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1023:0,71,255:25,0 chr1 175355402 . C . PASS END=175355402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:38:29:0,38,943:0,38,255:20,0 chr1 175355403 . A . PASS END=175355407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:24,0 chr1 175355408 . G . PASS END=175355408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 175355409 . A . PASS END=175355412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,749:0,72,255:24,0 chr1 175355413 . A . PASS END=175355414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr1 175355415 . G . PASS END=175355416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 175355417 . T . PASS END=175355419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 175355420 . G . PASS END=175355420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:17,0 chr1 175355421 . C . PASS END=175355428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,56,255:19,0 chr1 175355429 . C . PASS END=175355437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:17,0 chr1 175360424 . C . PASS END=175360431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 175360432 . A . PASS END=175360442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,624:0,60,255:26,0 chr1 175360443 . G . PASS END=175360482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:34,0 chr1 175360483 . T . PASS END=175360483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1046:0,69,255:31,0 chr1 175360484 . T . PASS END=175360532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1217:0,86,255:36,0 chr1 175360533 . A . PASS END=175360533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 175360534 . A . PASS END=175360553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 175360554 . A . PASS END=175360569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:25,0 chr1 175360570 . T . PASS END=175360574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,69,255:19,0 chr1 175362916 . C . PASS END=175363031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,118,1800:0,118,255:40,0 chr1 175365680 . G . PASS END=175365682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 175365683 . T . PASS END=175365683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 175365684 . G . PASS END=175365688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 175365689 . C . PASS END=175365689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 175365690 . C . PASS END=175365700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr1 175365701 . T . PASS END=175365706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 175365707 . G . PASS END=175365714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 175365715 . A . PASS END=175365715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 175365716 . T . PASS END=175365751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,768:0,66,255:26,0 chr1 175365752 . T . PASS END=175365759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 175365760 . G . PASS END=175365848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,879:0,75,255:26,0 chr1 175365849 . G . PASS END=175365849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 175365850 . A . PASS END=175365851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 175365852 . C . PASS END=175365856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 175365857 . A . PASS END=175365867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 175365868 . G . PASS END=175365875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 175365876 . C . PASS END=175365877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 175365878 . C . PASS END=175365896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 175365897 . G . PASS END=175365897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 175365898 . G . PASS END=175365900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 175365901 . C . PASS END=175365901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 175365902 . T . PASS END=175365905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 175365906 . G . PASS END=175365906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:26,0 chr1 175365907 . C . PASS END=175365909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 175365910 . A . PASS END=175365940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 175365941 . C . PASS END=175365943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 175372276 . C . PASS END=175372285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 175372286 . G . PASS END=175372318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,629:0,48,255:19,0 chr1 175372319 . G . PASS END=175372319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 175372320 . A . PASS END=175372369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,676:0,51,255:19,0 chr1 175372370 . C . PASS END=175372370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 175372371 . T . PASS END=175372397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,560:0,41,255:19,0 chr1 175372398 . T . PASS END=175372398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 175372399 . C . PASS END=175372408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:20,0 chr1 175372409 . A . PASS END=175372409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,621:0,43,255:19,0 chr1 175372410 . C . PASS END=175372423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 175372424 . A . PASS END=175372448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:19,0 chr1 175372449 . C . PASS END=175372449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 175372450 . C . PASS END=175372450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 175372451 . A . PASS END=175372451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 175372452 . G . PASS END=175372455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,615:0,54,255:18,0 chr1 175372456 . A . PASS END=175372456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 175372457 . C . PASS END=175372475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,623:0,41,255:18,0 chr1 175372476 . T . PASS END=175372476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 175372477 . C . PASS END=175372488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:18:0,40,621:0,40,255:19,0 chr1 175372489 . G . PASS END=175372489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 175372490 . C . PASS END=175372499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,654:0,46,255:19,0 chr1 175372500 . A . PASS END=175372500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:16,0 chr1 175372501 . C . PASS END=175372504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:18,0 chr1 175372505 . C . PASS END=175372509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 175372510 . C . PASS END=175372510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 175372511 . G . PASS END=175372518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 175372519 . A . PASS END=175372519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 175372520 . G . PASS END=175372520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 175372521 . A . PASS END=175372521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 175372522 . G . PASS END=175372522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 175372523 . C . PASS END=175372523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:20,0 chr1 175372524 . C . PASS END=175372546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 175372547 . G . PASS END=175372554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 175372555 . G . PASS END=175372588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:24,0 chr1 175372589 . A . PASS END=175372589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 175372590 . C . PASS END=175372595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 175372596 . C . PASS END=175372596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 175372597 . A . PASS END=175372633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,886:0,64,255:26,0 chr1 175372634 . C . PASS END=175372640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr1 175372641 . C . PASS END=175372641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 175372642 . A . PASS END=175372643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 175372644 . T . PASS END=175372647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 175372648 . G . PASS END=175372650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 175372651 . C . PASS END=175372651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 175372652 . C . PASS END=175372694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1125:0,80,255:33,0 chr1 175372695 . C . PASS END=175372695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:29,0 chr1 175372696 . A . PASS END=175372703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 175372704 . A . PASS END=175372705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr1 175372706 . G . PASS END=175372706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 175372707 . C . PASS END=175372708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 175372709 . A . PASS END=175372712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 175372713 . T . PASS END=175372723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 175372724 . A . PASS END=175372724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:23,0 chr1 175372725 . C . PASS END=175372747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,922:0,62,255:26,0 chr1 175372748 . T . PASS END=175372748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:15,0 chr1 175372749 . T . PASS END=175372752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:15,0 chr1 175375352 . C . PASS END=175375355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 175375356 . G . PASS END=175375371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 175375372 . C . PASS END=175375376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr1 175375377 . G . PASS END=175375471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,987:0,81,255:38,0 chr1 175375472 . A . PASS END=175375472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:37,0 chr1 175375473 . T . PASS END=175375477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1382:0,114,255:38,0 chr1 175375478 . A . PASS END=175375514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:38:0,101,1426:0,101,255:40,0 chr1 175375515 . G A, 50.00 PASS DP=45;MQ=249.98;MQRankSum=5.110;ReadPosRankSum=3.663;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,29,0:0.644,0.000:45:9,12,0:7,17,0:44:85,0,43,1029,564,1593:255,0,255:14,0:5.0000e+01,1.6179e-04,4.5647e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,12,17:7,9,19,10 chr1 175375516 . A . PASS END=175375552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,102,1530:0,107,255:40,0 chr1 175375553 . C . PASS END=175375581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1288:0,94,255:36,0 chr1 175375582 . T . PASS END=175375582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1199:0,58,255:35,0 chr1 175375583 . C . PASS END=175375629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:38:0,83,1311:0,83,255:38,0 chr1 175375630 . G . PASS END=175375630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr1 175375631 . G . PASS END=175375645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,101,255:37,0 chr1 175375646 . A . PASS END=175375682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,98,255:37,0 chr1 175375683 . T C, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,17,0:0,19,0:105:193,108,0,1394,108,1394:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,21:0,0,24,12 chr1 175375684 . G . PASS END=175375720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1152:0,88,255:35,0 chr1 175375721 . A . PASS END=175375724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr1 175375725 . T . PASS END=175375725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1142:0,78,255:31,0 chr1 175375726 . C . PASS END=175375764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:92:36:0,92,1302:0,92,255:40,0 chr1 175375765 . G . PASS END=175375801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1260:0,95,255:39,0 chr1 175375802 . T C, 142.85 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,15,0:0,17,0:93:181,96,0,1211,96,1211:255,99,0:0,0:1.4285e+02,9.2850e+01,0.0000e+00,4.5000e+02,1.2762e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,18:0,0,13,19 chr1 175375803 . G . PASS END=175375806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:30,0 chr1 175375807 . A . PASS END=175375809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr1 175375810 . A . PASS END=175375810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:29,0 chr1 175375811 . G . PASS END=175375811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 175375812 . C . PASS END=175375812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 175375813 . A . PASS END=175375823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1119:0,90,255:30,0 chr1 175375824 . A . PASS END=175375837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr1 175375838 . C . PASS END=175375839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175375840 . T . PASS END=175375841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 175375842 . T . PASS END=175375850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr1 175914289 . T . PASS END=175914306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,193,255:40,0 chr1 175916331 . C . PASS END=175916375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,117,1755:0,125,255:40,0 chr1 175941076 . C . PASS END=175941216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:96:45:0,96,1485:0,96,255:40,0 chr1 175956079 . C . PASS END=175956235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:81:31:0,81,1097:0,83,255:40,1 chr1 175956236 . C . PASS END=175956239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 175957424 . C . PASS END=175957463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:39:0,96,1512:0,96,255:40,0 chr1 175957464 . G . PASS END=175957464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:77:57:0,77,1901:0,77,255:40,2 chr1 175957465 . T . PASS END=175957548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:41:0,97,1530:0,97,255:40,1 chr1 175958498 . G . PASS END=175958603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,102,255:40,0 chr1 175958604 . G . PASS END=175958615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:27:0,67,986:0,67,255:26,0 chr1 175996708 . C . PASS END=175996822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:33:0,89,1236:0,89,255:40,0 chr1 175996823 . C . PASS END=175996823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:29,0 chr1 175996824 . A . PASS END=175996824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 176012322 . C . PASS END=176012403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,99,1773:0,99,255:40,0 chr1 176012846 . C . PASS END=176012954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,120,1789:0,120,255:40,0 chr1 176015317 . C . PASS END=176015460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:34:0,86,1233:0,86,255:40,0 chr1 176050288 . C . PASS END=176050380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:95:37:0,95,1328:0,95,255:40,0 chr1 176050381 . C . PASS END=176050423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:78:0,120,1800:0,170,255:40,0 chr1 176054912 . C . PASS END=176055026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:54:0,120,1800:0,158,255:40,0 chr1 176085760 . C . PASS END=176085817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:51:0,120,1800:0,123,255:40,0 chr1 176102983 . A . PASS END=176103007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:71:0,120,1800:0,175,255:40,0 chr1 176103008 . T . PASS END=176103033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:81:76:0,81,1215:0,198,255:40,0 chr1 176103034 . A . PASS END=176103036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:78:75:0,78,1170:0,209,255:26,0 chr1 176104146 . C . PASS END=176104222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:42:0,110,1496:0,110,255:40,0 chr1 176105624 . T . PASS END=176105660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:61:0,120,1800:0,151,255:40,0 chr1 176105661 . T . PASS END=176105683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:52:0,120,1800:0,130,255:40,0 chr1 176118142 . C . PASS END=176118181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:74:0,120,1800:0,202,255:40,0 chr1 176118182 . A . PASS END=176118210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:72:0,120,1800:0,216,255:40,0 chr1 176132005 . T . PASS END=176132008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:30,0 chr1 176132009 . T . PASS END=176132009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 176132010 . C . PASS END=176132029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1125:0,90,255:40,0 chr1 176132030 . A . PASS END=176132030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1421:0,79,255:39,0 chr1 176132031 . C . PASS END=176132110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,114,1710:0,129,255:40,0 chr1 176132111 . C . PASS END=176132124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:39:0,100,1366:0,100,255:38,0 chr1 176132951 . G . PASS END=176133027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:51:0,120,1800:0,152,255:40,0 chr1 176137820 . T . PASS END=176137854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:36:0,84,1335:0,84,255:40,0 chr1 176137855 . A . PASS END=176137855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1504:0,79,255:36,0 chr1 176137856 . G . PASS END=176137882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1235:0,81,255:37,0 chr1 176137883 . C . PASS END=176137884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1125:0,72,255:25,0 chr1 176145046 . C . PASS END=176145050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1386:0,90,255:40,0 chr1 176145051 . A . PASS END=176145051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1331:0,59,255:38,0 chr1 176145052 . A . PASS END=176145123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:85:41:0,85,1374:0,85,255:40,0 chr1 176145124 . T . PASS END=176145143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:42:0,80,1260:0,80,255:40,0 chr1 176153769 . C . PASS END=176153828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:76:0,120,1800:0,211,255:40,0 chr1 176170481 . T . PASS END=176170481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 176175708 . C . PASS END=176175717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,452:0,42,255:15,0 chr1 176175718 . C . PASS END=176175718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr1 176175719 . G . PASS END=176175720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 176175721 . T . PASS END=176175721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 176175722 . G . PASS END=176175722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 176175723 . C . PASS END=176175725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 176175726 . T . PASS END=176175726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 176175727 . T . PASS END=176175729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 176175730 . C . PASS END=176175731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 176175732 . T . PASS END=176175732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 176175733 . C . PASS END=176175733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 176175734 . G . PASS END=176175734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 176175735 . T . PASS END=176175735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 176175736 . A . PASS END=176175752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,483:0,45,255:16,0 chr1 176175753 . T . PASS END=176175753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 176175754 . T . PASS END=176175759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr1 176175760 . G . PASS END=176175761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 176175762 . G . PASS END=176175784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 176175785 . G . PASS END=176175785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 176175786 . C . PASS END=176175789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 176175790 . C . PASS END=176175798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 176175799 . G . PASS END=176175810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr1 176175811 . T . PASS END=176175834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 176175835 . T . PASS END=176175835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 176175836 . G . PASS END=176175862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 176175863 . C . LowGQ END=176175863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:9,0 chr1 176175864 . G . PASS END=176175873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:10,0 chr1 176175874 . C . PASS END=176175909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 176175910 . A . PASS END=176175922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr1 176175923 . C . LowGQ END=176176018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:1:0,0,31:0,0,31:3,0 chr1 176176019 . G . PASS END=176176110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 176176111 . A . PASS END=176176114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,141:3,0 chr1 176525459 . A . PASS END=176525462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 176525463 . T . PASS END=176525463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 176525464 . G . PASS END=176525474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,864:0,75,255:26,0 chr1 176525475 . T . PASS END=176525494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1048:0,84,255:29,0 chr1 176525495 . A . PASS END=176525495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:26,0 chr1 176525496 . T . PASS END=176525498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 176525499 . T . PASS END=176525499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 176525500 . G . PASS END=176525540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:37,0 chr1 176525541 . G . PASS END=176525541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr1 176525542 . G . PASS END=176525594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,91,255:36,0 chr1 176525595 . A . PASS END=176525595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:29,0 chr1 176525596 . A . PASS END=176525612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 176525613 . T . PASS END=176525615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 176525616 . G . PASS END=176525619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 176525620 . C . PASS END=176525623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 176525624 . G . PASS END=176525628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 176525629 . A . PASS END=176525630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1054:0,74,255:26,0 chr1 176525631 . G . PASS END=176525637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 176525638 . A . PASS END=176525638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:27,0 chr1 176525639 . G . PASS END=176525652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 176525653 . T . PASS END=176525653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 176525654 . C . PASS END=176525655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 176525656 . C . PASS END=176525665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 176525666 . G . PASS END=176525670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 176525671 . C . PASS END=176525680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1108:0,77,255:26,0 chr1 176525681 . G . PASS END=176525687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 176525688 . A . PASS END=176525688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 176525689 . C . PASS END=176525784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1155:0,80,255:40,0 chr1 176525785 . A . PASS END=176525785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:34,0 chr1 176525786 . G . PASS END=176525831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,81,255:34,0 chr1 176525832 . C . PASS END=176525832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 176525833 . G . PASS END=176525834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 176525835 . C . PASS END=176525835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 176525836 . T . PASS END=176525841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 176525842 . A . PASS END=176525843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1099:0,77,255:26,0 chr1 176525844 . G . PASS END=176525863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1153:0,80,255:31,0 chr1 176525864 . G . PASS END=176525864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:28,0 chr1 176525865 . G . PASS END=176525878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 176525879 . C . PASS END=176525970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,864:0,62,255:26,0 chr1 176525971 . T . PASS END=176525973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 176525974 . T . PASS END=176525974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 176525975 . A . PASS END=176525982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 176525983 . C . PASS END=176526017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr1 176526018 . C . PASS END=176526021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 176526022 . A . PASS END=176526027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1031:0,71,255:26,0 chr1 176526028 . G . PASS END=176526028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 176526029 . G . PASS END=176526029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 176526030 . G . PASS END=176526030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 176526031 . C . PASS END=176526031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 176526032 . T . PASS END=176526038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 176526039 . A . PASS END=176526039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,997:0,54,255:30,0 chr1 176526040 . G . PASS END=176526040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 176526041 . T . PASS END=176526041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 176526042 . C . PASS END=176526070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1111:0,80,255:35,0 chr1 176526071 . C . PASS END=176526071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 176526072 . G . PASS END=176526105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:34:0,99,1485:0,102,255:39,0 chr1 176526106 . T . PASS END=176526106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1234:0,70,255:36,0 chr1 176526107 . T . PASS END=176526377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:38:0,85,1473:0,85,255:40,0 chr1 176563660 . G . PASS END=176563662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:18:0,46,698:0,46,255:19,0 chr1 176563663 . T . PASS END=176563664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 176563665 . T . PASS END=176563665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,680:0,33,255:19,0 chr1 176563666 . T . PASS END=176563691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,754:0,63,255:26,0 chr1 176563692 . G . PASS END=176563694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 176563695 . A . PASS END=176563695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 176563696 . A . PASS END=176563819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,926:0,81,255:34,0 chr1 176563820 . A . PASS END=176563820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 176563821 . C . PASS END=176563826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 176563827 . A . PASS END=176563827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 176563828 . C . PASS END=176563829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 176563830 . T . PASS END=176563830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 176563831 . G . PASS END=176563834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 176563835 . C . PASS END=176563873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,961:0,60,255:26,0 chr1 176563874 . G . PASS END=176563874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 176563875 . T . PASS END=176563879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr1 176563880 . G . PASS END=176563882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 176563883 . T . PASS END=176563884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 176563885 . G . PASS END=176563899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:28,0 chr1 176563900 . G . PASS END=176563902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 176563903 . G . PASS END=176563962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1119:0,82,255:35,0 chr1 176563963 . T . PASS END=176563963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1064:0,65,255:31,0 chr1 176563964 . G . PASS END=176564000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1137:0,93,255:37,0 chr1 176564001 . G . PASS END=176564003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 176564004 . C . PASS END=176564004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 176564005 . A . PASS END=176564005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:32,0 chr1 176564006 . C . PASS END=176564039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:38:0,88,1372:0,88,255:38,0 chr1 176564040 . C . PASS END=176564040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:35,0 chr1 176564041 . C . PASS END=176564097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1141:0,82,255:36,0 chr1 176564098 . A . PASS END=176564099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 176564100 . T . PASS END=176564112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1127:0,93,255:31,0 chr1 176564113 . C . PASS END=176564119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,82,255:26,0 chr1 176564120 . T . PASS END=176564122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 176564123 . G . PASS END=176564126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 176564127 . G . PASS END=176564138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 176564139 . T . PASS END=176564140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1049:0,44,255:29,1 chr1 176564141 . G . PASS END=176564154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:32,0 chr1 176564155 . A . PASS END=176564155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:28,0 chr1 176564156 . T . PASS END=176564162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 176564163 . T . PASS END=176564163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:28,0 chr1 176564164 . A . PASS END=176564169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 176564170 . G . PASS END=176564170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:28,0 chr1 176564171 . A . PASS END=176564172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 176564173 . T . PASS END=176564174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 176564175 . G . PASS END=176564175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 176564176 . A . PASS END=176564176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 176564177 . G . PASS END=176564180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1156:0,93,255:31,0 chr1 176564181 . C . PASS END=176564181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 176564182 . T . PASS END=176564196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:34,0 chr1 176564197 . C . PASS END=176564197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr1 176564198 . A . PASS END=176564218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1082:0,88,255:33,0 chr1 176564219 . T . PASS END=176564219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,965:0,79,255:30,0 chr1 176564220 . T . PASS END=176564696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1172:0,85,255:40,0 chr1 176564697 . C . PASS END=176564731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:26,0 chr1 176640106 . G . PASS END=176640112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr1 176640113 . A . PASS END=176640113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 176640114 . T . PASS END=176640137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:29:0,81,1215:0,86,255:34,0 chr1 176640138 . C . PASS END=176640138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1132:0,72,255:33,0 chr1 176640139 . C . PASS END=176640149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1252:0,105,255:36,0 chr1 176640150 . A . PASS END=176640152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:36,0 chr1 176640153 . G . PASS END=176640228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:36:0,94,1282:0,94,255:40,0 chr1 176640229 . C . PASS END=176640229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1179:0,66,255:30,0 chr1 176640230 . A . PASS END=176640232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:31,0 chr1 176640233 . G . PASS END=176640233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1209:0,66,255:30,0 chr1 176640234 . A . PASS END=176640239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1294:0,92,255:33,0 chr1 176640240 . T . PASS END=176640240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1178:0,63,255:30,0 chr1 176640241 . C . PASS END=176640249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1097:0,82,255:31,0 chr1 176640250 . G . PASS END=176640250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 176640251 . G . PASS END=176640251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 176659273 . G . PASS END=176659279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 176659280 . T . PASS END=176659280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 176659281 . G . PASS END=176659300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,784:0,63,255:26,0 chr1 176659301 . T . PASS END=176659322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:30,0 chr1 176659323 . A . PASS END=176659323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 176659324 . C . PASS END=176659331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 176659332 . C . PASS END=176659332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr1 176659333 . A . PASS END=176659338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1063:0,84,255:28,0 chr1 176659339 . T . PASS END=176659339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 176659340 . G . PASS END=176659343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 176659344 . C . PASS END=176659345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 176659346 . T . PASS END=176659350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 176659351 . T . PASS END=176659359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 176659360 . A . PASS END=176659485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,958:0,81,255:35,0 chr1 176659486 . G . PASS END=176659486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:34,0 chr1 176659487 . G . PASS END=176659557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1263:0,91,255:40,0 chr1 176659558 . G . PASS END=176659558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1185:0,75,255:30,0 chr1 176659559 . C . PASS END=176659569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,89,255:31,0 chr1 176659570 . T . PASS END=176659570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1034:0,57,255:26,0 chr1 176659571 . C . PASS END=176659573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 176659574 . C . PASS END=176659576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 176659577 . T . PASS END=176659577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,868:0,51,255:24,0 chr1 176659578 . G . PASS END=176659583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 176659584 . T . PASS END=176659584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 176659585 . T . PASS END=176659585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 176659586 . T . PASS END=176659588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 176659589 . T . PASS END=176659589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,848:0,64,255:26,0 chr1 176659590 . T . PASS END=176659597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,910:0,81,255:27,0 chr1 176659598 . A . PASS END=176659611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,878:0,64,255:25,0 chr1 176659612 . G . PASS END=176659612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr1 176659613 . C . PASS END=176659619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 176661262 . A . PASS END=176661266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:53:20:0,53,806:0,53,255:20,0 chr1 176661267 . A . PASS END=176661269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 176661270 . T . PASS END=176661270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 176661271 . G . PASS END=176661285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:22:0,62,799:0,62,255:25,0 chr1 176661286 . C . PASS END=176661288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 176661289 . C . PASS END=176661292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 176661293 . C . PASS END=176661303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:30,0 chr1 176661304 . G . PASS END=176661306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1111:0,77,255:30,0 chr1 176661307 . T . PASS END=176661381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1156:0,85,255:35,0 chr1 176661382 . T . PASS END=176661382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:33,0 chr1 176661383 . G . PASS END=176661405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1225:0,86,255:35,0 chr1 176661406 . C . PASS END=176661406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:28,0 chr1 176661407 . C . PASS END=176661417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1139:0,80,255:30,0 chr1 176661418 . A . PASS END=176661418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 176661419 . C . PASS END=176661419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 176661420 . T . PASS END=176661420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1062:0,60,255:28,0 chr1 176661421 . G . PASS END=176661435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 176661436 . G . PASS END=176661441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,947:0,67,255:26,0 chr1 176661442 . T . PASS END=176661449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:26:0,48,720:0,78,255:17,0 chr1 176661450 . G . PASS END=176661450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:15,0 chr1 176661451 . A . PASS END=176661452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:48:26:0,48,720:0,65,255:16,0 chr1 176661453 . A . PASS END=176661453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 176661454 . G . PASS END=176661454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 176664874 . G . PASS END=176664878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1039:0,71,255:26,0 chr1 176664879 . C . PASS END=176664884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 176664885 . G . PASS END=176664885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 176664886 . C . PASS END=176664906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1147:0,86,255:34,0 chr1 176664907 . A . PASS END=176664907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:31,0 chr1 176664908 . G . PASS END=176664989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1160:0,88,255:39,0 chr1 176664990 . C . PASS END=176664990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:27,0 chr1 176664991 . T . PASS END=176664995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 176668236 . G . PASS END=176668242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 176668243 . T . PASS END=176668243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 176668244 . G . PASS END=176668253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 176668254 . A . PASS END=176668254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 176668255 . G . PASS END=176668268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr1 176668269 . G . PASS END=176668280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 176668281 . G . PASS END=176668281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 176668282 . G . PASS END=176668300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:23,0 chr1 176668301 . T . PASS END=176668301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 176668302 . A . PASS END=176668343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,764:0,66,255:26,0 chr1 176668344 . G . PASS END=176668355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 176668356 . T . PASS END=176668381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:25,0 chr1 176668382 . A . PASS END=176668382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 176668383 . C . PASS END=176668391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:23,0 chr1 176668392 . T . PASS END=176668392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:22,0 chr1 176668393 . G . PASS END=176668399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 176668400 . A . PASS END=176668400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:19,0 chr1 176668401 . C . PASS END=176668406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 176668407 . T . PASS END=176668407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 176668408 . C . PASS END=176668408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 176668409 . T . PASS END=176668410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 176668411 . C . PASS END=176668412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 176668413 . T . PASS END=176668413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 176668414 . G . PASS END=176668414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 176668415 . G . PASS END=176668420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,751:0,50,255:19,0 chr1 176668421 . T . PASS END=176668423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 176668424 . C . PASS END=176668426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 176668427 . G . PASS END=176668427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 176668428 . T . PASS END=176668429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 176668430 . C . PASS END=176668440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 176668441 . A . PASS END=176668441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 176668442 . G . PASS END=176668445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 176668446 . T . PASS END=176668446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 176668447 . C . PASS END=176668450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 176668451 . C . PASS END=176668452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 176668453 . G . PASS END=176668454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 176668455 . A . PASS END=176668455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 176668456 . A . PASS END=176668457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 176668458 . A . PASS END=176668458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 176668459 . C . PASS END=176668467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 176668468 . A . PASS END=176668468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:20,0 chr1 176668469 . G . PASS END=176668472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 176668473 . A . PASS END=176668473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,764:0,41,255:21,0 chr1 176668474 . C . PASS END=176668475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 176668476 . T . PASS END=176668476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:20,0 chr1 176668477 . G . PASS END=176668479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 176668480 . C . PASS END=176668480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 176668481 . C . PASS END=176668486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 176668487 . G . PASS END=176668487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 176668488 . A . PASS END=176668500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,754:0,66,255:24,0 chr1 176668501 . C . PASS END=176668501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 176668502 . A . PASS END=176668516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,922:0,62,255:26,0 chr1 176668517 . A . PASS END=176668518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 176668519 . A . PASS END=176668520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,851:0,57,255:27,0 chr1 176668521 . T . PASS END=176668523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,950:0,84,255:28,0 chr1 176668524 . A . PASS END=176668524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,879:0,67,255:26,0 chr1 176668525 . C . PASS END=176668526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 176668527 . T . PASS END=176668528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:50:28:0,50,779:0,50,255:25,0 chr1 176668529 . G . PASS END=176668532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 176668533 . G . PASS END=176668533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 176668534 . G . PASS END=176668534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 176668535 . A . PASS END=176668535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,980:0,59,255:28,0 chr1 176668536 . A . PASS END=176668538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1188:0,90,255:32,0 chr1 176668539 . T . PASS END=176668539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 176668540 . G . PASS END=176668545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1111:0,80,255:32,0 chr1 176668546 . G . PASS END=176668546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 176668547 . G . PASS END=176668561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:33:0,91,1205:0,91,255:35,0 chr1 176668562 . T . PASS END=176668562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:31,0 chr1 176668563 . T . PASS END=176668566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1078:0,91,255:33,0 chr1 176668567 . T . PASS END=176668567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:29,0 chr1 176668568 . G . PASS END=176668588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1158:0,88,255:37,0 chr1 176668589 . G . PASS END=176668589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1166:0,78,255:35,0 chr1 176668590 . C . PASS END=176668617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1305:0,95,255:36,0 chr1 176668618 . C . PASS END=176668618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:29,0 chr1 176668619 . T . PASS END=176668628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1164:0,86,255:34,0 chr1 176668629 . G . PASS END=176668629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:32,0 chr1 176668630 . C . PASS END=176668725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:33:0,82,1336:0,82,255:40,0 chr1 176671743 . G . PASS END=176671866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:85:37:0,85,1355:0,85,255:40,0 chr1 176671867 . T . PASS END=176671871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,109,1799:0,109,255:40,0 chr1 176675495 . G . PASS END=176675586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,109,1635:0,109,255:40,0 chr1 176679119 . G . PASS END=176679152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:34:0,93,1259:0,98,255:40,0 chr1 176679153 . T . PASS END=176679153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1280:0,52,255:39,0 chr1 176679154 . G . LowGQ END=176679155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,7:48:0:48:0,0,1268:0,0,255:40,0 chr1 176679156 . C . PASS END=176679191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,112,1800:0,112,255:40,0 chr1 176679192 . A . PASS END=176679312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:35:0,86,1376:0,86,255:40,0 chr1 176680971 . A . PASS END=176680977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,635:0,51,255:18,0 chr1 176680978 . C . PASS END=176680986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:25,0 chr1 176680987 . A . PASS END=176680990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 176680991 . A . PASS END=176680991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 176680992 . G . PASS END=176680995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 176680996 . T . PASS END=176680996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 176680997 . A . PASS END=176681084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:30:0,85,1094:0,85,255:40,0 chr1 176681085 . A . PASS END=176681085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:26:40:0,26,1288:0,26,255:32,0 chr1 176681086 . G . PASS END=176681106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1241:0,89,255:35,0 chr1 176681107 . T . PASS END=176681107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1005:0,41,255:30,0 chr1 176681108 . T . PASS END=176681117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 176708762 . G . PASS END=176708897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,972:0,81,255:40,0 chr1 176709116 . G . PASS END=176709116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 176709117 . A . PASS END=176709117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 176709118 . A . PASS END=176709178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1215:0,84,255:40,0 chr1 176709179 . T . PASS END=176709179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:57:53:0,57,1729:0,57,255:40,0 chr1 176709180 . C . PASS END=176709329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:31:0,83,1172:0,83,255:40,0 chr1 176709330 . G . PASS END=176709330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 176709331 . A . PASS END=176709332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:27,0 chr1 176734802 . C . PASS END=176734808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:24,0 chr1 176734809 . C . PASS END=176734809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 176734810 . A . PASS END=176734812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 176734813 . G . PASS END=176734813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 176734814 . G . PASS END=176734818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 176734819 . G . PASS END=176734951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:28:0,81,988:0,82,255:40,0 chr1 176734952 . G . PASS END=176734965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,80,255:26,0 chr1 176734966 . C . PASS END=176734973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:16,0 chr1 176738743 . A . PASS END=176738743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 176738744 . A . PASS END=176738764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:18,0 chr1 176738765 . C . PASS END=176738783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,792:0,66,255:26,0 chr1 176738784 . G . PASS END=176738784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 176738785 . A . PASS END=176738785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,999:0,71,255:27,0 chr1 176738786 . A . PASS END=176738789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr1 176738790 . G . PASS END=176738790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 176738791 . A . PASS END=176738899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1086:0,83,255:40,0 chr1 176738900 . T . PASS END=176738918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 176738919 . A . PASS END=176738920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 176740103 . G . PASS END=176740281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:39:0,81,1215:0,82,255:40,0 chr1 176740282 . T . PASS END=176740291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:64:28:0,64,984:0,64,255:26,0 chr1 176740292 . A . PASS END=176740292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 176740293 . A . PASS END=176740298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,933:0,64,255:26,0 chr1 176740299 . A . PASS END=176740299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:26,0 chr1 176740300 . G . PASS END=176740312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,945:0,66,255:23,0 chr1 176740313 . G . PASS END=176740313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 176740314 . G . PASS END=176740316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 176758945 . C . PASS END=176758947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 176758948 . G . PASS END=176758972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:26,0 chr1 176758973 . G . PASS END=176758997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr1 176758998 . G . PASS END=176758998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 176758999 . C . PASS END=176759016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1255:0,86,255:32,0 chr1 176759017 . G . PASS END=176759017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:29,0 chr1 176759018 . C . PASS END=176759081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1210:0,86,255:34,0 chr1 176759082 . G . PASS END=176759087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:25,0 chr1 176759088 . T . PASS END=176759111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,613:0,51,255:18,0 chr1 176759112 . A . PASS END=176759113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 176760483 . C . PASS END=176760484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,909:0,64,255:26,0 chr1 176760485 . T . PASS END=176760522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:28:0,84,1031:0,84,255:39,0 chr1 176760523 . A . PASS END=176760523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:40,0 chr1 176760524 . G . PASS END=176760586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1305:0,98,255:40,0 chr1 176760587 . G . PASS END=176760598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:74:30:0,74,1039:0,74,255:26,0 chr1 176760599 . T . PASS END=176760600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:45:26:0,45,821:0,45,255:25,0 chr1 176760601 . A . PASS END=176760611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,832:0,61,255:25,0 chr1 176760612 . G . PASS END=176760618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 176762696 . G . PASS END=176762701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:31,0 chr1 176762702 . T . PASS END=176762702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 176762703 . G . PASS END=176762805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:33:0,88,1219:0,88,255:40,0 chr1 176769197 . A . PASS END=176769268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,100,1352:0,100,255:40,0 chr1 176809309 . C . PASS END=176809403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:41:0,85,1466:0,85,255:40,0 chr1 176809404 . G . PASS END=176809404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1412:0,68,255:34,0 chr1 176809405 . A . PASS END=176809405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1358:0,81,255:34,0 chr1 176809406 . A . PASS END=176809407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:34,0 chr1 176811516 . G . PASS END=176811590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:30:0,90,1085:0,90,255:40,0 chr1 176826747 . T . PASS END=176826786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,137,255:40,0 chr1 176833420 . C . PASS END=176833423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 176833424 . A . PASS END=176833424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 176833425 . T . PASS END=176833435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,824:0,69,255:26,0 chr1 176833436 . T . PASS END=176833597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1002:0,81,255:40,0 chr1 176833598 . A . PASS END=176833614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr1 176833615 . A . PASS END=176833619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 176833620 . T . PASS END=176833623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 176833624 . G . PASS END=176833642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 176833643 . A . PASS END=176833648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 176833649 . C . PASS END=176833649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 176833650 . C . PASS END=176833652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 176833653 . C . PASS END=176833656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 176833657 . C . PASS END=176833657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 176837976 . T . PASS END=176838159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1225:0,81,255:40,0 chr1 176838160 . A . PASS END=176838160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:31,0 chr1 176838161 . T . PASS END=176838163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:32,0 chr1 176845673 . C . PASS END=176845758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1188:0,93,255:40,0 chr1 176845759 . C . PASS END=176845773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr1 176851995 . A . PASS END=176852000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1271:0,89,255:37,0 chr1 176852001 . A . PASS END=176852001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1114:0,77,255:35,0 chr1 176852002 . T . PASS END=176852122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,95,255:40,0 chr1 176852123 . C . PASS END=176852130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr1 176853475 . C . PASS END=176853489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,826:0,69,255:26,0 chr1 176853490 . A . PASS END=176853492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 176853493 . G . PASS END=176853493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 176853494 . G . PASS END=176853502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 176853503 . G . PASS END=176853506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,948:0,70,255:26,0 chr1 176853507 . G . PASS END=176853523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,863:0,83,255:28,0 chr1 176853524 . G . PASS END=176853524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 176853525 . A . PASS END=176853553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1055:0,80,255:31,0 chr1 176853554 . T . PASS END=176853554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr1 176853555 . G . PASS END=176853587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1097:0,87,255:31,0 chr1 176853588 . A . PASS END=176853615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 176853616 . A . PASS END=176853616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,759:0,14,255:18,0 chr1 176853617 . G . PASS END=176853626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:18,0 chr1 176857207 . A . PASS END=176857220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1139:0,90,255:37,0 chr1 176857221 . A . PASS END=176857221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:48:38:0,48,1131:0,48,255:34,0 chr1 176857222 . G . PASS END=176857309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:38:0,99,1485:0,114,255:40,0 chr1 176857310 . A . PASS END=176857340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,99,1485:0,112,255:40,0 chr1 176863698 . C . PASS END=176863702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 176863703 . G . PASS END=176863729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:9,0 chr1 176863730 . A . PASS END=176863730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 176863731 . G . PASS END=176863731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 176863732 . A . PASS END=176863732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 176863733 . T . PASS END=176863734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 176863735 . G . PASS END=176863735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 176863736 . G . PASS END=176863747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,303:0,27,255:9,0 chr1 176863748 . T . LowGQ END=176863748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,233:12,0,245:8,0 chr1 176863749 . C . PASS END=176863752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 176863753 . T . PASS END=176863753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 176863754 . C . PASS END=176863771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:8,0 chr1 176863772 . C . PASS END=176863772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 176863773 . A . PASS END=176863786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:9,0 chr1 176863787 . T . PASS END=176863787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 176863788 . G . PASS END=176863789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 176863790 . A . PASS END=176863798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 176863799 . G . PASS END=176863799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 176863800 . A . PASS END=176863803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 176863804 . A . PASS END=176863804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 176863805 . G . PASS END=176863805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 176863806 . G . PASS END=176863820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 176863821 . G . PASS END=176863821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 176863822 . C . PASS END=176863832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 176863833 . G . PASS END=176863835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 176863836 . G C, 48.97 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=0.454;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:5,2,0:6,6,0:48:84,0,50,286,393,679:250,0,255:12,0:4.8967e+01,7.6882e-05,5.3000e+01,2.8590e+02,4.2804e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,6,2:4,7,2,6 chr1 176863837 . T . PASS END=176863850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 176863851 . G . PASS END=176863851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 176863852 . A . PASS END=176863866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 176863867 . T C, 49.57 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=2.051;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,9,0:0.450,0.000:20:5,2,0:6,7,0:48:84,0,50,322,393,715:255,0,255:12,0:4.9568e+01,6.9634e-05,5.3000e+01,3.2180e+02,4.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,6,3:4,7,3,6 chr1 176863868 . G . PASS END=176863870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 176863871 . T . PASS END=176863871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 176863872 . G . PASS END=176863874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 176863875 . G . PASS END=176863875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 176863876 . C . PASS END=176863877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 176863878 . G . PASS END=176863878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 176863879 . G . PASS END=176863881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 176863882 . T . PASS END=176863882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 176863883 . C . PASS END=176863896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 176863897 . A . PASS END=176863898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 176863899 . G . PASS END=176863904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 176863905 . T . PASS END=176863915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 176863916 . G . PASS END=176863916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 176863917 . C . PASS END=176863922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 176863923 . G . PASS END=176863923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 176863924 . G . PASS END=176863924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 176863925 . G . PASS END=176863926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 176863927 . T . PASS END=176863936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 176863937 . G . PASS END=176863951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:17,0 chr1 176863952 . C . PASS END=176863959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:15:0,36,540:0,45,255:13,0 chr1 176863960 . G . PASS END=176863961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 176863962 . G . PASS END=176863963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:12,0 chr1 176863964 . T . PASS END=176863964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 176863965 . G . PASS END=176863966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 176903288 . C . PASS END=176903291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1235:0,89,255:35,0 chr1 176903292 . A . PASS END=176903292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 176903293 . C . PASS END=176903470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:33:0,80,1215:0,80,255:40,0 chr1 176903471 . T . PASS END=176903476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 176905402 . C . PASS END=176905506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:38:0,81,1240:0,81,255:40,0 chr1 176913027 . C . PASS END=176913135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:33:0,89,1270:0,89,255:40,0 chr1 176913136 . A . PASS END=176913136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1429:0,71,255:39,0 chr1 176913137 . C . PASS END=176913143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:41:0,85,1482:0,85,255:40,0 chr1 176913144 . A . PASS END=176913144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1303:0,73,255:36,0 chr1 176913145 . G . PASS END=176913154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:40:0,82,1427:0,82,255:38,0 chr1 176915062 . C . PASS END=176915066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 176915067 . T . PASS END=176915067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 176915068 . G . PASS END=176915068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 176915069 . T . PASS END=176915069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1030:0,43,255:27,0 chr1 176915070 . T . PASS END=176915072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 176915073 . T . PASS END=176915073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 176915074 . T . PASS END=176915074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 176915075 . T . PASS END=176915076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1111:0,77,255:30,0 chr1 176915077 . A . PASS END=176915077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 176915078 . G . PASS END=176915079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:29,0 chr1 176915080 . A . PASS END=176915081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr1 176915082 . C . PASS END=176915083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 176915084 . G . PASS END=176915209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1121:0,84,255:40,0 chr1 176915210 . G . PASS END=176915210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1105:0,60,255:30,0 chr1 176915211 . T . PASS END=176915222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1163:0,80,255:30,0 chr1 176915223 . T . PASS END=176915251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,894:0,64,255:25,0 chr1 176915252 . T . PASS END=176915256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 176918321 . C . PASS END=176918321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 176918322 . C . PASS END=176918325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 176918326 . G . PASS END=176918337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,884:0,66,255:26,0 chr1 176918338 . G . PASS END=176918341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 176918342 . T . PASS END=176918342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 176918343 . A . PASS END=176918347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 176918348 . G . PASS END=176918348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:28,0 chr1 176918349 . T . PASS END=176918412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1096:0,86,255:34,0 chr1 176918413 . G . PASS END=176918413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 176918414 . T . PASS END=176918440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:31:0,83,1186:0,83,255:32,0 chr1 176918441 . T . PASS END=176918441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 176918442 . C . PASS END=176918443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 176918444 . T . PASS END=176918461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 176918462 . T . PASS END=176918463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr1 176918464 . C . PASS END=176918464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 176918465 . A . PASS END=176918476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:21:0,45,675:0,63,255:19,0 chr1 176918477 . C . PASS END=176918487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:15:0,33,495:0,45,255:12,0 chr1 176926814 . C . PASS END=176926815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 176926816 . C . PASS END=176926816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 176926817 . G . PASS END=176926824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 176926825 . T . PASS END=176926825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr1 176926826 . G . PASS END=176926829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1119:0,90,255:31,0 chr1 176926830 . T . PASS END=176926830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 176926831 . C . PASS END=176926831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 176926832 . C . PASS END=176926832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 176926833 . A . PASS END=176926835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 176926836 . T . PASS END=176926836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 176926837 . T . PASS END=176926839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 176926840 . G . PASS END=176926840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 176926841 . A . PASS END=176926842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 176926843 . C . PASS END=176926843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 176926844 . T . PASS END=176926846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 176926847 . A . PASS END=176926847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 176926848 . A . PASS END=176926850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 176926851 . C . PASS END=176926851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 176926852 . A . PASS END=176926854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 176926855 . G . PASS END=176926855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 176926856 . G . PASS END=176926862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 176926863 . T . PASS END=176926863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 176926864 . T . PASS END=176926878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1213:0,99,255:33,0 chr1 176926879 . T . PASS END=176926879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr1 176926880 . A . PASS END=176926894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:32,0 chr1 176926895 . G . PASS END=176926895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr1 176926896 . C . PASS END=176926905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1156:0,83,255:33,0 chr1 176926906 . C . PASS END=176926906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:29,0 chr1 176926907 . A . PASS END=176926913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:29,0 chr1 176926914 . T . PASS END=176926914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:27,0 chr1 176926915 . C . PASS END=176926916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 176926917 . A . PASS END=176926925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1092:0,74,255:26,0 chr1 176926926 . T . PASS END=176926927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 176926928 . C . PASS END=176926935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 176926936 . C . PASS END=176926936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 176926937 . G . PASS END=176926940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 176926941 . G . PASS END=176926951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:20:0,42,630:0,60,255:19,0 chr1 176926952 . C . PASS END=176926953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:13,0 chr1 176926954 . T . PASS END=176926964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:16,0 chr1 176927481 . C . PASS END=176927618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:31:0,90,1296:0,93,255:40,0 chr1 176934299 . C . PASS END=176934373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:54:0,120,1800:0,143,255:40,0 chr1 176983927 . C . PASS END=176984011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,104,1800:0,104,255:40,0 chr1 176992516 . C . PASS END=176992552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1299:0,92,255:36,0 chr1 176992553 . A G, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=1.572;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,21,0:0.583,0.000:36:6,12,0:9,9,0:47:85,0,48,743,500,1243:255,0,255:15,0:5.0000e+01,8.0765e-05,5.0645e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,13,8:10,5,10,11 chr1 176992554 . C . PASS END=176992590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1202:0,92,255:35,0 chr1 176992591 . A . PASS END=176992631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:33,0 chr1 176992632 . A . PASS END=176992648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 176992649 . A . PASS END=176992653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 176992654 . T . PASS END=176992676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 176992677 . T . PASS END=176992677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 176992678 . G . PASS END=176992691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 176992692 . A . PASS END=176992707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 176993719 . C . PASS END=176993868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:38:0,96,1390:0,96,255:40,0 chr1 176998770 . C . PASS END=176998869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:87:36:0,87,1305:0,87,255:40,0 chr1 176998870 . G . PASS END=176998870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 176998871 . G . PASS END=176998877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:33,0 chr1 176999942 . C . PASS END=177000088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:32:0,87,1305:0,96,255:40,0 chr1 177001592 . C . PASS END=177001592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 177001593 . T . PASS END=177001593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 177001594 . G . PASS END=177001599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:23,0 chr1 177001600 . A . PASS END=177001600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 177001601 . G . PASS END=177001620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,917:0,72,255:26,0 chr1 177001621 . T . PASS END=177001782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,1015:0,80,255:40,0 chr1 177001783 . T . PASS END=177001810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:26,0 chr1 177001811 . T . PASS END=177001811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 177001812 . C . PASS END=177001816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 177001817 . G . PASS END=177001817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 177001818 . T . PASS END=177001832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 177001833 . C . PASS END=177001834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 177001835 . G . PASS END=177001846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 177001847 . T . PASS END=177001847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 177001848 . G . PASS END=177001855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 177001856 . T . PASS END=177001856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 177001857 . C . PASS END=177001870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 177001871 . C . PASS END=177001871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:23,0 chr1 177001872 . A . PASS END=177001875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 177001876 . C . PASS END=177001876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 177001877 . T . PASS END=177001877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 177001878 . G . PASS END=177001881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 177001882 . C . PASS END=177001883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 177001884 . C . PASS END=177001953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1149:0,86,255:36,0 chr1 177001954 . A . PASS END=177001954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 177001955 . A . PASS END=177001956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 177001957 . A . PASS END=177001957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 177001958 . T . PASS END=177001961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 177001962 . C . PASS END=177001962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 177001963 . A . PASS END=177001963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:25,0 chr1 177001964 . G . PASS END=177001985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,917:0,71,255:26,0 chr1 177030214 . C . PASS END=177030215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr1 177030216 . T . PASS END=177030216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:33,0 chr1 177030217 . G . PASS END=177030357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,102,255:40,0 chr1 177030358 . C . PASS END=177030358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 177030359 . C . PASS END=177030367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 177030368 . A . PASS END=177030376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 177030377 . A . PASS END=177030377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:21,0 chr1 177030378 . T . PASS END=177030382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr1 177030383 . T . PASS END=177030397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,53,255:18,0 chr1 177030398 . A . PASS END=177030399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr1 177030400 . C . PASS END=177030401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr1 177133530 . C . PASS END=177133552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:19,0 chr1 177133553 . G . PASS END=177133559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:22,0 chr1 177133560 . C . PASS END=177133560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 177133561 . C . PASS END=177133562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 177133563 . G . PASS END=177133563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 177133564 . G . PASS END=177133580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,813:0,66,255:24,0 chr1 177133581 . T . PASS END=177133581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 177133582 . T . PASS END=177133582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,816:0,72,255:24,0 chr1 177133583 . T . PASS END=177133583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:22,0 chr1 177133584 . C . PASS END=177133584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 177133585 . T . PASS END=177133586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 177133587 . C . PASS END=177133587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 177133588 . C . PASS END=177133588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 177133589 . G . PASS END=177133589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,724:0,33,255:21,0 chr1 177133590 . G . PASS END=177133591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 177133592 . A . PASS END=177133593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 177133594 . G . PASS END=177133594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 177133595 . T . PASS END=177133595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 177133596 . C . PASS END=177133597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 177133598 . T . PASS END=177133599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,791:0,42,255:23,0 chr1 177133600 . G . PASS END=177133653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,854:0,61,255:26,0 chr1 177133654 . C . PASS END=177133654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 177133655 . A . PASS END=177133656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 177133657 . G . PASS END=177133657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 177133658 . T . PASS END=177133666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 177133667 . C . PASS END=177133670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 177133671 . G . PASS END=177133672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 177133673 . A . PASS END=177133679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,751:0,50,255:19,0 chr1 177133680 . G . PASS END=177133691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr1 177133692 . T . PASS END=177133692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 177133693 . G . PASS END=177133694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 177133695 . T . PASS END=177133709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:18:0,42,630:0,44,255:18,0 chr1 177133710 . A . PASS END=177133710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 177133711 . C . PASS END=177133711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 177133712 . T . PASS END=177133712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 177133713 . C . PASS END=177133713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 177133714 . C . PASS END=177133714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 177133715 . A . PASS END=177133716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:14,0 chr1 177133717 . C . PASS END=177133717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:12,0 chr1 177133718 . T . PASS END=177133718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:12,0 chr1 177133719 . C . PASS END=177133720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 177133721 . T . PASS END=177133721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr1 177133722 . T . PASS END=177133723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 177133724 . G . PASS END=177133724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 177133725 . A . PASS END=177133725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 177133726 . T . PASS END=177133727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,465:0,25,255:11,0 chr1 177133728 . G . PASS END=177133728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:11,0 chr1 177133729 . A . PASS END=177133729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 177133730 . T . PASS END=177133730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 177133731 . C . PASS END=177133732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 177133733 . A . PASS END=177133733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 177133734 . C . PASS END=177133735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 177133736 . T . PASS END=177133736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 177133737 . C . PASS END=177133737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 177133738 . G . PASS END=177133738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:11,0 chr1 177133739 . C . PASS END=177133740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 177133741 . G . PASS END=177133741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 177133742 . G . PASS END=177133744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 177133745 . G . PASS END=177133745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 177133746 . C . PASS END=177133747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 177133748 . G . PASS END=177133750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 177133751 . G . PASS END=177133751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr1 177133752 . C . PASS END=177133754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 177133755 . G . LowGQ END=177133755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 177133756 . C . PASS END=177133759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 177133760 . G . PASS END=177133778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 177133779 . A . PASS END=177133793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:9,0 chr1 177133794 . A G, 0.01 DRAGENSnpHardQUAL DP=10;MQ=250.00;MQRankSum=1.393;ReadPosRankSum=1.393;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:2,0,0:7,1,0:26:9,0,50,36,318,354:9,0,255:7,0:1.0650e-02,2.6111e+01,7.9111e+01,6.1867e+01,3.7876e+02,3.8275e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,0,1:5,4,1,0 chr1 177133795 . G . PASS END=177133795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 177133796 . A . PASS END=177133812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr1 177199013 . A . PASS END=177199023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 177199024 . G . PASS END=177199035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr1 177199036 . G . PASS END=177199042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 177199043 . G . PASS END=177199055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 177199056 . C . PASS END=177199060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 177199061 . G . PASS END=177199063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 177199064 . C . PASS END=177199105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr1 177199106 . T . PASS END=177199106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,482:0,21,255:14,0 chr1 177199107 . T . PASS END=177199118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,698:0,54,255:19,0 chr1 177199119 . C . PASS END=177199119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr1 177199120 . C . PASS END=177199130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 177199131 . C . PASS END=177199131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr1 177199132 . T . PASS END=177199149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:22,0 chr1 177199150 . T . PASS END=177199151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 177199152 . C . PASS END=177199158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 177199159 . A . PASS END=177199159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 177199160 . G . PASS END=177199169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:22,0 chr1 177199170 . A . PASS END=177199170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 177199171 . T . PASS END=177199171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 177199172 . C . PASS END=177199178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 177199179 . A . PASS END=177199198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,884:0,69,255:23,0 chr1 177199199 . G . PASS END=177199199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 177199200 . G . PASS END=177199214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 177199215 . C . PASS END=177199239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,590:0,48,255:19,0 chr1 177199240 . G . PASS END=177199251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,32,255:13,0 chr1 177199252 . G . PASS END=177199262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 177199263 . C . PASS END=177199264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 177199265 . A . PASS END=177199276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 177199277 . T . PASS END=177199277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 177199278 . A . PASS END=177199281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 177225055 . G . PASS END=177225245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:82:36:0,82,1236:0,82,255:40,0 chr1 177226312 . G . PASS END=177226330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1103:0,87,255:31,0 chr1 177226331 . T . PASS END=177226331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 177226332 . T . PASS END=177226333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr1 177226334 . T . PASS END=177226334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 177226335 . G . PASS END=177226469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1038:0,80,255:40,0 chr1 177226470 . A . PASS END=177226470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 177226471 . G . PASS END=177226479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 177226480 . G . PASS END=177226490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 177226491 . C . PASS END=177226491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 177226492 . A . PASS END=177226518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr1 177226519 . A . PASS END=177226519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,735:0,39,255:20,0 chr1 177226520 . G . PASS END=177226520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 177242624 . G . PASS END=177242706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:36:0,84,1371:0,84,255:40,0 chr1 177242707 . A . PASS END=177242707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 177242708 . G . PASS END=177242715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1200:0,83,255:31,0 chr1 177242716 . A . PASS END=177242716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:28,0 chr1 177242717 . G . PASS END=177242717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 177242718 . T . PASS END=177242718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr1 177242719 . A . PASS END=177242721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 177242722 . G . PASS END=177242722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:28,0 chr1 177242723 . T . PASS END=177242724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 177242725 . A . PASS END=177242725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 177242726 . C . PASS END=177242727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 177242728 . T . PASS END=177242728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:27,0 chr1 177242729 . G . PASS END=177242729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 177245334 . G . PASS END=177245351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,978:0,75,255:26,0 chr1 177245352 . C . PASS END=177245352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 177245353 . T . PASS END=177245353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 177245354 . G . PASS END=177245364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1116:0,87,255:35,0 chr1 177245365 . T . PASS END=177245365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:33,0 chr1 177245366 . G . PASS END=177245539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:35:0,87,1305:0,101,255:40,0 chr1 177245540 . G . PASS END=177245561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,77,255:26,0 chr1 177245562 . A . PASS END=177245570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,62,255:19,0 chr1 177247699 . A . PASS END=177247715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:21:0,63,754:0,63,255:26,0 chr1 177247716 . C . PASS END=177247716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 177247717 . T . PASS END=177247717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 177247718 . G . PASS END=177247725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 177247726 . T . PASS END=177247727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 177247728 . C . PASS END=177247754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1056:0,84,255:33,0 chr1 177247755 . G . PASS END=177247755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 177247756 . C . PASS END=177247811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:34,0 chr1 177247812 . G . PASS END=177247812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr1 177247813 . G . PASS END=177247816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 177247817 . T . PASS END=177247817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 177247818 . G . PASS END=177247828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 177247829 . G . PASS END=177247829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 177247830 . C . PASS END=177247830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 177247831 . T . PASS END=177247832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 177247833 . T . PASS END=177247841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 177247842 . A . PASS END=177247853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:24,0 chr1 177247854 . C G, 50.00 PASS DP=30;MQ=249.90;MQRankSum=4.043;ReadPosRankSum=1.545;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,18,0:0.600,0.000:30:7,16,0:5,2,0:47:85,0,47,614,400,1015:255,0,255:10,0:5.0000e+01,8.3871e-05,5.0311e+01,4.5000e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,7,11:4,8,9,9 chr1 177247855 . T . PASS END=177247871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 177247872 . C . PASS END=177247887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr1 177247888 . A . PASS END=177247891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 177247892 . C . PASS END=177247897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 177247898 . T . PASS END=177247913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 177247914 . A . PASS END=177247921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:17:0,36,540:0,51,255:13,0 chr1 177249548 . G . PASS END=177249564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:17,0 chr1 177249565 . G . PASS END=177249565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 177249566 . G . PASS END=177249571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 177249572 . A . PASS END=177249572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 177249573 . A . PASS END=177249591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:19,0 chr1 177249592 . G . PASS END=177249592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 177249593 . T . PASS END=177249593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 177249594 . G . PASS END=177249606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 177249607 . T . PASS END=177249607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 177249608 . T . PASS END=177249608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 177249609 . C . PASS END=177249609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,745:0,22,255:21,0 chr1 177249610 . C . PASS END=177249616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 177249617 . T . PASS END=177249617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 177249618 . T . PASS END=177249622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 177249623 . G . PASS END=177249623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 177249624 . G . PASS END=177249629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 177249630 . A . PASS END=177249659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:18:0,47,720:0,47,255:19,0 chr1 177249660 . T . PASS END=177249660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 177249661 . C . PASS END=177249683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 177249684 . T . PASS END=177249684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 177249685 . G . PASS END=177249699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 177249700 . G . PASS END=177249712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,35,255:13,0 chr1 177249713 . C . PASS END=177249736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,604:0,45,255:16,0 chr1 177249737 . A . PASS END=177249738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:14,0 chr1 177249739 . G . PASS END=177249740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 177249741 . T . PASS END=177249741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:13,0 chr1 177249742 . G . PASS END=177249744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 177249745 . G . PASS END=177249748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 177249749 . C . PASS END=177249772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:17,0 chr1 177249773 . C . PASS END=177249774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 177249775 . A . PASS END=177249781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:17,0 chr1 177249782 . G . PASS END=177249784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 177249785 . C . PASS END=177249792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 177249793 . A . PASS END=177249816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 177249817 . T . PASS END=177249818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 177249819 . C . PASS END=177249849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,807:0,63,255:22,0 chr1 177249850 . A . PASS END=177249887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,576:0,41,255:19,0 chr1 177249888 . G . PASS END=177249888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 177249889 . A . PASS END=177249889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 177249890 . G . PASS END=177249893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 177249894 . C . PASS END=177249894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 177249895 . A . PASS END=177249908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 177249909 . A . PASS END=177249909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 177249910 . G . PASS END=177249911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 177249912 . A . PASS END=177249923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 177249924 . C . PASS END=177249930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 177249931 . G . PASS END=177249933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 177249934 . G . PASS END=177249941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 177249942 . C . PASS END=177249943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 177249944 . T . PASS END=177249995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,806:0,62,255:26,0 chr1 177249996 . G . PASS END=177249998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 177249999 . C . PASS END=177249999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,962:0,53,255:25,0 chr1 177250000 . T . PASS END=177250001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 177250002 . G . PASS END=177250002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 177250003 . T . PASS END=177250003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 177250004 . G . PASS END=177250004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 177250005 . C . PASS END=177250005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:25,0 chr1 177250006 . A . PASS END=177250008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 177250009 . T . PASS END=177250011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 177250012 . T . PASS END=177250013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 177250014 . T . PASS END=177250020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,976:0,68,255:26,0 chr1 177250021 . T . PASS END=177250021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 177250022 . G . PASS END=177250031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 177250032 . A . PASS END=177250033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 177250034 . C . PASS END=177250034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 177250035 . T . PASS END=177250054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,997:0,80,255:32,0 chr1 177250055 . C . PASS END=177250055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr1 177250056 . C . PASS END=177250074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1180:0,83,255:32,0 chr1 177250075 . T . PASS END=177250075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 177250076 . C . PASS END=177250076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 177250077 . T . PASS END=177250086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 177250087 . C . PASS END=177250087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 177250088 . C . PASS END=177250088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 177250089 . T . PASS END=177250090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 177250091 . T . PASS END=177250091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:27,0 chr1 177250092 . G . PASS END=177250096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 177250097 . C . PASS END=177250102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 177250103 . C . PASS END=177250105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 177250106 . T . PASS END=177250106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:25,0 chr1 177250107 . G . PASS END=177250107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr1 177250108 . A . PASS END=177250112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 177250113 . T . PASS END=177250113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 177250114 . G . PASS END=177250115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:31,0 chr1 177250116 . T . PASS END=177250116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:30,0 chr1 177250117 . T . PASS END=177250128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr1 177250129 . A . PASS END=177250129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 177250130 . T . PASS END=177250145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1172:0,83,255:30,0 chr1 177250146 . G . PASS END=177250147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 177250148 . C . PASS END=177250150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 177250151 . G . PASS END=177250151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 177250152 . G . PASS END=177250487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:31:0,84,1260:0,84,255:40,0 chr1 177250488 . C . PASS END=177250488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 177250489 . G . PASS END=177250512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1350:0,100,255:37,0 chr1 177250513 . G . PASS END=177250513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:32,0 chr1 177250514 . C . PASS END=177250644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:35:0,90,1341:0,90,255:40,0 chr1 177250645 . C . PASS END=177250645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:32,0 chr1 177250646 . C . PASS END=177250664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1154:0,83,255:33,0 chr1 177898993 . T . PASS END=177899000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 177899001 . G . PASS END=177899002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 177899003 . T . PASS END=177899008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 177899009 . G . PASS END=177899016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 177899017 . A . PASS END=177899017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,905:0,70,255:28,0 chr1 177899018 . C . PASS END=177899020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 177899021 . T . PASS END=177899021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 177899022 . G . PASS END=177899036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 177899037 . G . PASS END=177899037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:28,0 chr1 177899038 . C . PASS END=177899043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 177899044 . C . PASS END=177899057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,953:0,65,255:26,0 chr1 177899058 . T . PASS END=177899064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 177899680 . C . PASS END=177899778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,108,1582:0,108,255:40,0 chr1 177901625 . C . PASS END=177901651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 177901652 . A . PASS END=177901652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 177901653 . G . PASS END=177901694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 177901695 . T . PASS END=177901695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 177901696 . C . PASS END=177901704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 177901833 . C . PASS END=177901846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 177901847 . A . PASS END=177901847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 177901848 . A . PASS END=177901863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 177901864 . C . PASS END=177901867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 177901868 . G . PASS END=177901870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 177901871 . G . PASS END=177901871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 177901872 . G . PASS END=177901878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:16,0 chr1 177901879 . A . PASS END=177901879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 177901880 . G . PASS END=177901883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 177901884 . A . PASS END=177901885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 177901886 . G . PASS END=177901895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:17,0 chr1 177901896 . A . PASS END=177901929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,429:0,34,255:15,0 chr1 177901930 . T . PASS END=177901930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 177901931 . C . PASS END=177901944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 177902349 . C . PASS END=177902350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1372:0,108,255:36,0 chr1 177902351 . C . PASS END=177902387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,102,1327:0,102,255:40,0 chr1 177902388 . G A, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.799;ReadPosRankSum=4.271;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,27,0:0.574,0.000:47:11,13,0:9,14,0:48:85,0,48,957,715,1673:255,0,255:19,0:5.0000e+01,7.7141e-05,5.1104e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,18,9:10,10,16,11 chr1 177902389 . G . PASS END=177902425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:47:0,114,1710:0,128,255:40,0 chr1 177902426 . T . PASS END=177902447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:42:0,99,1545:0,99,255:40,0 chr1 177902619 . C . PASS END=177902619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:34,0 chr1 177902620 . T . PASS END=177902622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1317:0,95,255:35,0 chr1 177902623 . G . PASS END=177902623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr1 177902624 . T . PASS END=177902771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:35:0,87,1288:0,87,255:40,0 chr1 177905433 . C . PASS END=177905500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,99,1485:0,110,255:40,0 chr1 177906349 . C . PASS END=177906352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 177906353 . G . PASS END=177906353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 177906354 . C . PASS END=177906357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 177906358 . G . PASS END=177906429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1133:0,84,255:34,0 chr1 177906430 . C . PASS END=177906430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr1 177906431 . T . PASS END=177906479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1131:0,80,255:32,0 chr1 177906480 . T . PASS END=177906491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:74:27:0,74,1078:0,74,255:26,0 chr1 177906492 . C . PASS END=177906498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:27,0 chr1 177906499 . C . PASS END=177906571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:25,0 chr1 177906572 . C . PASS END=177906574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 177906575 . C . PASS END=177906576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 177906577 . A . PASS END=177906579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 177906580 . G . PASS END=177906584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 177906585 . G . PASS END=177906608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 177906609 . T . PASS END=177906619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 177906620 . T . PASS END=177906630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 177906631 . C . PASS END=177906631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 177906632 . C . PASS END=177906648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 177908837 . C . PASS END=177908912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:37:0,81,1297:0,81,255:40,0 chr1 177909745 . C . PASS END=177909849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:32:0,91,1325:0,91,255:40,0 chr1 177911035 . C . PASS END=177911042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 177911043 . G . PASS END=177911047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 177911048 . A . PASS END=177911048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr1 177911049 . C . PASS END=177911059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:26,0 chr1 177911060 . G . PASS END=177911065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 177911066 . C . PASS END=177911066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 177911067 . T . PASS END=177911067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 177911068 . G . PASS END=177911068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:28,0 chr1 177911069 . C . PASS END=177911085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:35,0 chr1 177911086 . G . PASS END=177911086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr1 177911087 . A . PASS END=177911165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1094:0,80,255:36,0 chr1 177911166 . G . PASS END=177911175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:24,0 chr1 177913696 . C . PASS END=177913801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:38:0,90,1298:0,90,255:40,0 chr1 177915455 . T . PASS END=177915473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:51:0,120,1800:0,139,255:40,0 chr1 177915474 . A C, 206.04 PASS DP=53;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,26,0:0,27,0:156:244,159,0,1999,159,1999:255,159,0:0,0:2.0604e+02,1.5604e+02,0.0000e+00,4.5000e+02,1.9081e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,21:0,0,25,28 chr1 177915475 . T . PASS END=177915511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,115,1791:0,115,255:40,0 chr1 177915512 . T . PASS END=177915666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:85:32:0,85,1310:0,85,255:40,0 chr1 177916960 . C . PASS END=177916962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,925:0,42,255:26,0 chr1 177916963 . G . PASS END=177916965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 177916966 . T . PASS END=177916966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,814:0,9,255:24,0 chr1 177916967 . G . PASS END=177916968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr1 177916969 . C . PASS END=177916969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:28,0 chr1 177916970 . C . PASS END=177916970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 177916971 . C . PASS END=177916971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 177916972 . C . PASS END=177916975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,976:0,43,255:28,0 chr1 177916976 . G . PASS END=177916976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 177916977 . G . PASS END=177916977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 177916978 . C . PASS END=177916989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:35,0 chr1 177916990 . G . PASS END=177916990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1194:0,53,255:34,0 chr1 177916991 . C . PASS END=177917046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1208:0,91,255:36,0 chr1 177917047 . T . PASS END=177917047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr1 177917048 . C . PASS END=177917056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:34:0,84,1260:0,91,255:34,0 chr1 177917057 . C . PASS END=177917066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,74,255:24,0 chr1 177917067 . T . PASS END=177917067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 177917068 . C . PASS END=177917072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,64,255:21,0 chr1 177917073 . C . PASS END=177917076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 177917077 . A . PASS END=177917077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,774:0,25,255:15,0 chr1 177921049 . C . PASS END=177921130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,105,1575:0,111,255:40,0 chr1 177923414 . C . PASS END=177923511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1186:0,82,255:40,0 chr1 177927267 . C . PASS END=177927385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:35:0,99,1274:0,101,255:40,1 chr1 177927386 . A . PASS END=177927386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1427:0,71,255:32,0 chr1 177927387 . G . PASS END=177927401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:35:0,87,1302:0,89,255:35,0 chr1 177927402 . G . PASS END=177927404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1159:0,69,255:29,0 chr1 177927405 . G . PASS END=177927408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 177927409 . A . PASS END=177927409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:27,0 chr1 177927410 . G . PASS END=177927441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1158:0,85,255:33,0 chr1 177927442 . T . PASS END=177927442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:31,0 chr1 177927443 . C . PASS END=177927461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:31,0 chr1 177927462 . C . PASS END=177927462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 177927463 . A . PASS END=177927474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 177927475 . G . PASS END=177927475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 177927476 . C . PASS END=177927476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 177927477 . G . PASS END=177927497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,923:0,65,255:26,0 chr1 177927975 . C . PASS END=177927981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 177927982 . T . PASS END=177927982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 177927983 . G . PASS END=177927990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,939:0,65,255:26,0 chr1 177927991 . A . PASS END=177927994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 177927995 . G . PASS END=177927995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr1 177927996 . A . PASS END=177928007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr1 177928008 . C . PASS END=177928010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 177928011 . C . PASS END=177928011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 177928012 . A . PASS END=177928012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 177928013 . G . PASS END=177928018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:29,0 chr1 177928019 . C . PASS END=177928019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 177928020 . T . PASS END=177928029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 177928030 . C . PASS END=177928030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 177928031 . T . PASS END=177928036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 177928037 . G . PASS END=177928037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 177928038 . T . PASS END=177928039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 177928040 . T . PASS END=177928062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,908:0,64,255:26,0 chr1 177928063 . G . PASS END=177928063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 177928064 . C . PASS END=177928065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 177928066 . T . PASS END=177928066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 177928067 . T . PASS END=177928070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,787:0,72,255:24,0 chr1 177928071 . C . PASS END=177928071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 177928072 . T . PASS END=177928076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 177928077 . A . PASS END=177928077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 177928078 . A . PASS END=177928082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:22,0 chr1 177928083 . C . PASS END=177928083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 177928084 . A . PASS END=177928089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 177928090 . T . PASS END=177928090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 177928091 . C . PASS END=177928091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 177928092 . C . PASS END=177928094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 177928095 . C . PASS END=177928095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 177928096 . T . PASS END=177928106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,46,255:19,0 chr1 177928107 . T . PASS END=177928109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 177928110 . C . PASS END=177928110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:12,0 chr1 177929477 . C . PASS END=177929538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,208,255:40,0 chr1 177929926 . C . PASS END=177929939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,103,1698:0,103,255:40,0 chr1 177929940 . G A, 47.53 PASS DP=54;MQ=250.00;MQRankSum=6.146;ReadPosRankSum=4.341;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,22,0:0.415,0.000:53:13,12,0:18,10,0:46:82,0,50,771,1092,1863:255,0,255:30,0:4.7527e+01,9.8368e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,11,16,6:12,19,10,12 chr1 177929941 . T . PASS END=177929986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:53:0,120,1800:0,126,255:40,0 chr1 177929987 . T C, 49.86 PASS DP=69;MQ=250.00;MQRankSum=7.129;ReadPosRankSum=4.391;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,33,0:0.478,0.000:69:14,19,0:22,14,0:48:85,0,50,1180,1249,2429:255,0,255:35,0:4.9864e+01,6.6527e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,14,17,16:12,24,15,18 chr1 177929988 . G . PASS END=177930024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:69:0,120,1800:0,200,255:40,0 chr1 177930025 . A . PASS END=177930077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,175,255:40,0 chr1 177930725 . C . PASS END=177930725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 177930726 . A . PASS END=177930753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,980:0,80,255:31,0 chr1 177930754 . G . PASS END=177930754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 177930755 . C . PASS END=177930856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1166:0,83,255:40,0 chr1 177930857 . T . PASS END=177930862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1123:0,80,255:28,0 chr1 177930863 . A . PASS END=177930863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 177930864 . T . PASS END=177930866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 177930867 . T . PASS END=177930867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 177930868 . G . PASS END=177930868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 177930869 . G . PASS END=177930869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 177933306 . C . PASS END=177933405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1215:0,104,255:40,0 chr1 177933406 . C . PASS END=177933414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 177934182 . T . PASS END=177934302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:36:0,80,1250:0,80,255:40,0 chr1 177935028 . C . PASS END=177935140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:31:0,86,1183:0,86,255:40,0 chr1 177936818 . C . PASS END=177936818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 177936819 . T . PASS END=177936820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 177936821 . G . PASS END=177936821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 177936822 . A . PASS END=177936822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 177936823 . A . PASS END=177936823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,355:0,6,255:10,0 chr1 177936824 . T . PASS END=177936825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 177936826 . C . PASS END=177936826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 177936827 . A . PASS END=177936830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 177936831 . G . PASS END=177936831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 177936832 . A . PASS END=177936838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 177936839 . T . PASS END=177936839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 177936840 . A . PASS END=177936843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr1 177936844 . A . PASS END=177936844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 177936845 . C . PASS END=177936848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 177936849 . C . PASS END=177936849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 177936850 . G . PASS END=177936854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 177936855 . A . PASS END=177936855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:11,0 chr1 177936856 . G . PASS END=177936859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 177936860 . A . PASS END=177936868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,430:0,42,255:17,0 chr1 177936869 . A . PASS END=177936869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr1 177936870 . C . PASS END=177936871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 177936872 . G . PASS END=177936877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 177936878 . T . PASS END=177936878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 177936879 . G . PASS END=177936887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 177936888 . C . PASS END=177936888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 177936889 . T . PASS END=177936914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,786:0,63,255:25,0 chr1 177936915 . G . PASS END=177936918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 177936919 . A . PASS END=177936920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 177936921 . G . PASS END=177936964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1164:0,83,255:36,0 chr1 177936965 . T . PASS END=177936965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1140:0,75,255:31,0 chr1 177936966 . C . PASS END=177937007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1138:0,91,255:35,0 chr1 177937008 . G . PASS END=177937008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 177937009 . G . PASS END=177937027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,86,255:31,0 chr1 177937028 . T . PASS END=177937058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,940:0,70,255:26,0 chr1 177937059 . A . PASS END=177937070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,58,255:19,0 chr1 177937071 . C . PASS END=177937071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 177937072 . C . PASS END=177937090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 177937091 . A . PASS END=177937093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 177937094 . C . PASS END=177937111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 177937112 . T . PASS END=177937116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 178063628 . A . PASS END=178063643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 178063644 . C . PASS END=178063644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 178063645 . G . PASS END=178063664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 178063665 . C . PASS END=178063665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 178063666 . G . PASS END=178063669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 178063670 . T . PASS END=178063670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 178063671 . C . PASS END=178063691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 178063692 . C . PASS END=178063692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 178063693 . G . PASS END=178063705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 178063706 . T . PASS END=178063706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 178063707 . C . PASS END=178063707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 178063708 . G . PASS END=178063708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:14,0 chr1 178063709 . C . PASS END=178063713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:18,0 chr1 178063714 . G . PASS END=178063714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:18,2 chr1 178063715 . C . LowGQ END=178063715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:9,0,255:18,2 chr1 178063716 . C . PASS END=178063716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:21,0 chr1 178063717 . C . PASS END=178063722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr1 178063723 . G . PASS END=178063723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 178063724 . G . PASS END=178063726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 178063727 . C . PASS END=178063727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:22,0 chr1 178063728 . T . PASS END=178063731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr1 178063732 . C . PASS END=178063732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 178063733 . G . PASS END=178063747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,69,255:23,0 chr1 178063748 . A . PASS END=178063748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 178063749 . G . PASS END=178063777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:23,0 chr1 178063778 . C . PASS END=178063778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 178063779 . G . PASS END=178063820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 178063821 . G . PASS END=178063825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr1 178063826 . T . PASS END=178063826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:17,0 chr1 178063827 . A . PASS END=178063829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 178202427 . A . PASS END=178202769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:37:0,94,1268:0,94,255:40,0 chr1 178202770 . G . PASS END=178202806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,100,1722:0,100,255:40,0 chr1 178202807 . A G, 214.15 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,37,0:0,19,0:164:252,167,0,2067,167,2067:255,168,0:0,0:2.1415e+02,1.6415e+02,0.0000e+00,4.5000e+02,1.9892e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,27:0,0,24,32 chr1 178202808 . T . PASS END=178202844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:55:0,120,1800:0,160,255:40,0 chr1 178202845 . C . PASS END=178202996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:33:0,90,1341:0,95,255:40,0 chr1 178202997 . A . PASS END=178203004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1039:0,60,255:26,0 chr1 178203005 . A . PASS END=178203007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 178203008 . A . PASS END=178203008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:25,0 chr1 178203009 . A . PASS END=178203012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:23,0 chr1 178203013 . A . PASS END=178203015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:28:0,45,675:0,84,255:18,0 chr1 178220363 . A . PASS END=178220396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,181,255:40,0 chr1 178252699 . A . PASS END=178252723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1279:0,89,255:36,0 chr1 178252724 . T . PASS END=178252724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:34,0 chr1 178252725 . C . PASS END=178252820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1260:0,93,255:40,0 chr1 178252821 . A . PASS END=178252821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 178252822 . A . PASS END=178252822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 178252823 . G . PASS END=178252826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 178269127 . A . PASS END=178269253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:39:0,93,1395:0,104,255:40,0 chr1 178310731 . A . PASS END=178310743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,164,255:40,0 chr1 178358421 . A . PASS END=178358442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:86:0,120,1800:0,245,255:40,0 chr1 178359235 . A . PASS END=178359341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:38:0,93,1395:0,108,255:40,0 chr1 178389646 . G . PASS END=178389755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:34:0,84,1260:0,102,255:40,0 chr1 178408557 . G . PASS END=178408558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 178408559 . C . PASS END=178408582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,535:0,45,255:19,0 chr1 178408583 . A . PASS END=178408585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 178408586 . C . PASS END=178408587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 178408588 . C . PASS END=178408613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,764:0,63,255:22,0 chr1 178408614 . A . PASS END=178408614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 178408615 . T . PASS END=178408615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr1 178408616 . G . PASS END=178408622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1057:0,87,255:30,0 chr1 178408623 . A . PASS END=178408623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 178408624 . G . PASS END=178408627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 178408628 . A . PASS END=178408628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 178408629 . A . PASS END=178408652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:32,0 chr1 178408653 . A . PASS END=178408686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,914:0,62,255:26,0 chr1 178408687 . C . PASS END=178408687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 178408688 . T . PASS END=178408690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 178408691 . G . PASS END=178408710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:17:0,47,651:0,47,255:19,0 chr1 178410684 . G . PASS END=178410782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:97:38:0,97,1343:0,97,255:40,0 chr1 178411810 . G . PASS END=178412364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1302:0,81,255:40,0 chr1 178414653 . G . PASS END=178414793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:35:0,83,1274:0,83,255:40,0 chr1 178414794 . C . PASS END=178414797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:37:0,63,945:0,111,255:22,0 chr1 178420706 . G . PASS END=178420847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,102,255:40,0 chr1 178420848 . C . PASS END=178420850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr1 178421551 . T . PASS END=178421555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 178421556 . T . PASS END=178421556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 178421557 . C . PASS END=178421566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr1 178421567 . T . PASS END=178421567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 178421568 . T . PASS END=178421575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 178421576 . G . PASS END=178421576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 178421577 . T . PASS END=178421577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 178421578 . G . PASS END=178421696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:28:0,81,1095:0,84,255:37,0 chr1 178421697 . T . PASS END=178421699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 178421700 . A . PASS END=178421734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1163:0,80,255:32,0 chr1 178421735 . C . PASS END=178421753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,900:0,61,255:29,0 chr1 178421754 . C . PASS END=178421754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 178421755 . C . PASS END=178421760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 178421761 . C . PASS END=178421761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 178421762 . A . PASS END=178421780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:24,0 chr1 178421781 . T . PASS END=178421781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 178421782 . T . PASS END=178421786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 178421787 . A . PASS END=178421787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,811:0,56,255:20,0 chr1 178423582 . G . PASS END=178423783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:35:0,89,1215:0,89,255:40,0 chr1 178425835 . G . PASS END=178425843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1278:0,89,255:32,0 chr1 178425844 . T . PASS END=178425844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr1 178425845 . C . PASS END=178425991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1353:0,89,255:40,0 chr1 178425992 . T . PASS END=178425994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 178425995 . C . PASS END=178425998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,95,255:28,0 chr1 178425999 . T . PASS END=178425999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:27,0 chr1 178426000 . G . PASS END=178426004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1055:0,84,255:28,0 chr1 178426005 . G . PASS END=178426005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 178426006 . C . PASS END=178426006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 178426007 . A . PASS END=178426007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 178426008 . G . PASS END=178426010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 178426011 . A . PASS END=178426011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 178426012 . A . PASS END=178426013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 178426014 . A . PASS END=178426014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr1 178426015 . T . PASS END=178426031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:25,0 chr1 178426032 . C . PASS END=178426034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,62,255:19,0 chr1 178426818 . T . PASS END=178426829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1150:0,88,255:36,0 chr1 178426830 . A . PASS END=178426830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1065:0,52,255:34,0 chr1 178426831 . C . PASS END=178427213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,95,255:40,0 chr1 178427214 . C . PASS END=178427214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 178427215 . A . PASS END=178427345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1174:0,85,255:40,0 chr1 178427346 . A . PASS END=178427346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:29,0 chr1 178427347 . G . PASS END=178427360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 178427361 . T . PASS END=178427361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 178427362 . A . PASS END=178427362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:24,0 chr1 178427363 . G . PASS END=178427366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,96,255:26,0 chr1 178427367 . T . PASS END=178427367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr1 178427368 . C . PASS END=178427369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 178427370 . G . PASS END=178427380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:29,0 chr1 178427381 . T . PASS END=178427390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:31:0,69,957:0,76,255:28,0 chr1 178427391 . G . PASS END=178427398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr1 178427399 . T . PASS END=178427399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 178427400 . G . PASS END=178427400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 178427401 . C . PASS END=178427403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 178427404 . G . PASS END=178427405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1156:0,83,255:27,0 chr1 178427406 . T . PASS END=178427409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 178427410 . C . PASS END=178427411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 178427412 . C . PASS END=178427416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 178427417 . C . PASS END=178427431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:27,0 chr1 178427432 . G . PASS END=178427432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 178427433 . A . PASS END=178427439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 178427440 . A . PASS END=178427440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 178427441 . G . PASS END=178427645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1123:0,80,255:40,0 chr1 178427646 . A . PASS END=178427646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:31,0 chr1 178427647 . G . PASS END=178427661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:33,0 chr1 178427662 . A . PASS END=178427662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:26,0 chr1 178427663 . G . PASS END=178427666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 178427667 . A . PASS END=178427679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:26,0 chr1 178433413 . G . PASS END=178433418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 178433419 . T . PASS END=178433419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 178433420 . C . PASS END=178433547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1215:0,85,255:40,0 chr1 178435055 . T . PASS END=178435055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 178435056 . A . PASS END=178435062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:20,0 chr1 178435063 . A . PASS END=178435083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:22,0 chr1 178435084 . G . PASS END=178435084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,629:0,33,255:19,0 chr1 178435085 . C . PASS END=178435214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,771:0,62,255:26,0 chr1 178435215 . A . PASS END=178435215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 178435216 . G . PASS END=178435222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 178435223 . G . PASS END=178435223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 178435224 . A . PASS END=178435224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 178435225 . A . PASS END=178435229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 178435230 . A . PASS END=178435230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:17,0 chr1 178435231 . T . PASS END=178435242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,682:0,47,255:19,0 chr1 178435243 . A . PASS END=178435246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 178435247 . A . PASS END=178435247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 178435248 . T . PASS END=178435257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 178436469 . G . PASS END=178436556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,198,255:40,0 chr1 178439828 . G . PASS END=178439858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,116,1612:0,116,255:40,0 chr1 178442210 . G . PASS END=178442227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,108,1237:0,108,255:39,0 chr1 178442228 . C . PASS END=178442351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:37:0,95,1360:0,95,255:40,0 chr1 178442352 . A . PASS END=178442352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:35,0 chr1 178442353 . A . PASS END=178442356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1303:0,95,255:36,0 chr1 178442357 . A . PASS END=178442357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 178442358 . A . PASS END=178442374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1294:0,89,255:36,0 chr1 178448670 . C . PASS END=178448750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:69:0,120,1800:0,197,255:40,0 chr1 178451447 . C . PASS END=178451532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,156,255:40,0 chr1 178452310 . C . PASS END=178452395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:42:0,98,1478:0,98,255:40,0 chr1 178452396 . C . PASS END=178452398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 178452399 . C . PASS END=178452400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:44:0,81,1215:0,132,255:27,0 chr1 178452401 . C . PASS END=178452403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:41:0,75,1125:0,123,255:26,0 chr1 178452404 . T . PASS END=178452406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,126,255:27,0 chr1 178452407 . A . PASS END=178452417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,80,255:26,0 chr1 178455569 . C . PASS END=178455577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 178455578 . G . PASS END=178455582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 178455583 . G . PASS END=178455583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 178455584 . G . PASS END=178455584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 178455585 . C . PASS END=178455585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 178455586 . C . PASS END=178455587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 178455588 . G . PASS END=178455617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:18,0 chr1 178455618 . G . PASS END=178455663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 178455664 . G . PASS END=178455664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 178455665 . C . PASS END=178455693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:23,0 chr1 178455694 . A . PASS END=178455694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 178455695 . T . PASS END=178455697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 178455698 . T . PASS END=178455698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 178455699 . T . PASS END=178455703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,801:0,72,255:24,0 chr1 178455704 . T . PASS END=178455704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 178455705 . G . PASS END=178455706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 178455707 . T . PASS END=178455733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,47,255:19,0 chr1 178455734 . A . PASS END=178455734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:14,0 chr1 178455735 . G . PASS END=178455770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,609:0,41,255:18,0 chr1 178455771 . T . PASS END=178455777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,540:0,34,255:13,0 chr1 178455778 . A . PASS END=178455797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:19,0 chr1 178455798 . A . PASS END=178455800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 178455801 . G . PASS END=178455802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 178455803 . G . PASS END=178455814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 178455815 . G . PASS END=178455818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 178455819 . G . PASS END=178455819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 178455820 . G . PASS END=178455833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 178455834 . G . PASS END=178455854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:23,0 chr1 178455855 . T . PASS END=178455855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 178455856 . T . PASS END=178455893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,861:0,69,255:26,0 chr1 178455894 . A . PASS END=178455894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:20,0 chr1 178455895 . G . PASS END=178455918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,894:0,75,255:26,0 chr1 178455919 . G . PASS END=178455919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 178455920 . G . PASS END=178455929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 178455930 . G . PASS END=178455930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 178455931 . G . PASS END=178455935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr1 178455936 . C . PASS END=178455962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 178457636 . C . PASS END=178457734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:35:0,99,1485:0,105,255:40,0 chr1 178459207 . C . PASS END=178459230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:19,0 chr1 178459231 . G . PASS END=178459264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:22,0 chr1 178459265 . G . PASS END=178459266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 178459267 . A . PASS END=178459286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,826:0,72,255:25,0 chr1 178459287 . G . PASS END=178459287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 178459288 . C . PASS END=178459345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,862:0,61,255:26,0 chr1 178459346 . C . PASS END=178459348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 178459349 . G . PASS END=178459352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 178459353 . C . PASS END=178459353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 178459354 . T . PASS END=178459376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,65,255:26,0 chr1 178459377 . T . PASS END=178459377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:23,0 chr1 178459378 . T . PASS END=178459393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,900:0,62,255:26,0 chr1 178459394 . G . PASS END=178459395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 178459396 . C . PASS END=178459411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:26,0 chr1 178459412 . C . PASS END=178459412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 178459413 . T . PASS END=178459425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 178459426 . A . PASS END=178459427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,721:0,49,255:19,0 chr1 178459428 . C . PASS END=178459439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,892:0,69,255:23,0 chr1 178459440 . T . PASS END=178459440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 178459441 . T . PASS END=178459441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 178459442 . G . PASS END=178459442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 178459443 . C . PASS END=178459461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr1 178459462 . T . PASS END=178459462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 178459463 . C . PASS END=178459479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 178459480 . C . PASS END=178459499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,675:0,48,255:17,0 chr1 178459500 . T . PASS END=178459517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 178459518 . C . PASS END=178459518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 178459519 . A . PASS END=178459544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 178459545 . A . PASS END=178459566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 178459567 . C . PASS END=178459572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 178461636 . C . PASS END=178461654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1263:0,89,255:37,0 chr1 178461655 . C . PASS END=178461655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:35,0 chr1 178461656 . A . PASS END=178461701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1218:0,86,255:38,0 chr1 178463589 . C . PASS END=178463592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr1 178463593 . G . PASS END=178463593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 178463594 . T . PASS END=178463595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 178463596 . G . PASS END=178463596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 178463597 . C . PASS END=178463614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 178463615 . G . PASS END=178463615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 178463616 . C . PASS END=178463622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 178463623 . G . PASS END=178463623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 178463624 . G . PASS END=178463630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 178463631 . C . PASS END=178463632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 178463633 . C . PASS END=178463633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 178463634 . C . PASS END=178463651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr1 178463652 . G . PASS END=178463652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 178463653 . C . PASS END=178463661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 178463662 . C . PASS END=178463663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,604:0,35,255:14,0 chr1 178463664 . G . PASS END=178463686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,507:0,45,255:16,0 chr1 178463687 . A . PASS END=178463687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 178463688 . A . PASS END=178463688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 178463689 . T . PASS END=178463689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 178463690 . T . PASS END=178463691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 178463692 . A . PASS END=178463693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 178463694 . G . PASS END=178463695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 178463696 . A . PASS END=178463699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 178463700 . T . PASS END=178463700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 178463701 . C . PASS END=178463702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 178463703 . G . PASS END=178463703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,480:0,6,255:12,0 chr1 178463704 . G . PASS END=178463704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 178463705 . C . PASS END=178463705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 178463706 . C . PASS END=178463706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 178463707 . C . PASS END=178463707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 178463708 . C . PASS END=178463708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 178463709 . A . PASS END=178463717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 178463718 . C . PASS END=178463718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 178463719 . T . PASS END=178463719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 178463720 . G . PASS END=178463723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 178463724 . A . PASS END=178463734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 178463735 . C . PASS END=178463735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 178463736 . T . PASS END=178463736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 178463737 . G . PASS END=178463786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,701:0,60,255:26,0 chr1 178463787 . C . PASS END=178463787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 178463788 . C . PASS END=178463796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:25,0 chr1 178463797 . G . PASS END=178463800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 178463801 . A . PASS END=178463816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,911:0,67,255:26,0 chr1 178463817 . T . PASS END=178463835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,987:0,81,255:28,0 chr1 178463836 . C . PASS END=178463837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 178463838 . G . PASS END=178463844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 178463845 . G . PASS END=178463846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 178463847 . G . PASS END=178463848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 178463849 . T . PASS END=178463892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 178463893 . C . PASS END=178463893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:21,0 chr1 178463894 . A . PASS END=178463929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,876:0,66,255:24,0 chr1 178463930 . C . PASS END=178463945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:19,0 chr1 178466035 . C . PASS END=178466038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 178466039 . T . PASS END=178466039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 178466040 . G . PASS END=178466041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 178466042 . G . PASS END=178466042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 178466043 . C . PASS END=178466044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 178466045 . G . PASS END=178466049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 178466050 . A . PASS END=178466054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:21,0 chr1 178466055 . A . PASS END=178466056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,759:0,47,255:21,0 chr1 178466057 . C . PASS END=178466068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 178466069 . C . PASS END=178466069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 178466070 . A . PASS END=178466080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 178466081 . G . PASS END=178466086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 178466087 . T G, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,13,0:0,14,0:78:166,81,0,1047,81,1047:255,81,0:0,0:1.2826e+02,7.8263e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,10:0,0,17,10 chr1 178466088 . C . PASS END=178466090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 178466091 . G . PASS END=178466091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 178466092 . G . PASS END=178466095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 178466096 . T . PASS END=178466096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr1 178466097 . G . PASS END=178466102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 178466103 . G . PASS END=178466103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 178466104 . T . PASS END=178466104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 178466105 . G . PASS END=178466124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:33,0 chr1 178466125 . G . PASS END=178466125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr1 178466126 . A . PASS END=178466126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1058:0,60,255:32,0 chr1 178466127 . C . PASS END=178466144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1227:0,99,255:35,0 chr1 178466249 . C . PASS END=178466317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:34:0,93,1303:0,95,255:40,0 chr1 178482324 . A . PASS END=178482386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,118,1800:0,118,255:40,0 chr1 178483162 . A . PASS END=178483193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:40:0,84,1365:0,84,255:40,0 chr1 178483194 . G . PASS END=178483230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:43:0,100,1499:0,100,255:40,0 chr1 178483231 . G A, 172.48 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,23,0:0,19,0:122:210,125,0,1531,125,1531:255,129,0:0,0:1.7248e+02,1.2248e+02,0.0000e+00,4.5000e+02,1.5725e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,27:0,0,20,22 chr1 178483232 . C . PASS END=178483268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:42:0,93,1486:0,93,255:40,0 chr1 178483269 . G . PASS END=178483309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1057:0,82,255:37,0 chr1 178483310 . A . PASS END=178483318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,964:0,70,255:24,0 chr1 178483319 . A . PASS END=178483319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:21,0 chr1 178483320 . G . PASS END=178483320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 178483835 . A . PASS END=178483903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,141,255:40,0 chr1 178484994 . A . PASS END=178485050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,100,1690:0,100,255:40,0 chr1 178485728 . C . PASS END=178485809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,130,255:40,0 chr1 178489507 . G . PASS END=178489571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,112,1745:0,112,255:40,0 chr1 178489652 . A . PASS END=178489702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,110,1326:0,110,255:40,0 chr1 178489808 . T . PASS END=178489808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 178489809 . C . PASS END=178489940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:30:0,81,1215:0,83,255:40,0 chr1 178489941 . A . PASS END=178489977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:51:0,95,1655:0,95,255:40,0 chr1 178489978 . T G, 212.06 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,27,0:0,28,0:162:250,165,0,2073,165,2073:255,165,0:0,0:2.1206e+02,1.6206e+02,0.0000e+00,4.5000e+02,1.9683e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,30:0,0,31,24 chr1 178489979 . G . PASS END=178490015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,140,255:40,0 chr1 178490016 . G . PASS END=178490072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:37:0,98,1396:0,98,255:40,0 chr1 178490357 . G . PASS END=178490399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,163,255:40,0 chr1 178490693 . T . PASS END=178490756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,104,1451:0,104,255:40,0 chr1 178490807 . C . PASS END=178490859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,157,255:40,0 chr1 178491460 . G . PASS END=178491467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,931:0,64,255:26,0 chr1 178491468 . C . PASS END=178491476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 178491477 . G . PASS END=178491477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 178491478 . C . PASS END=178491562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1064:0,80,255:38,0 chr1 178491563 . T . PASS END=178491563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 178491564 . G . PASS END=178491567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 178491568 . G . PASS END=178491575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 178492437 . G . PASS END=178492446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 178492447 . T A, 116.21 PASS DP=23;MQ=248.04;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,16,0:0,7,0:66:154,69,0,867,69,867:255,69,0:0,0:1.1621e+02,6.6214e+01,1.0354e-06,4.5000e+02,1.0098e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,9:0,0,15,8 chr1 178492448 . G . PASS END=178492461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 178492462 . G . PASS END=178492474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,765:0,54,255:18,0 chr1 178745900 . A . PASS END=178745956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,124,255:40,0 chr1 178753553 . A . PASS END=178753657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:50:0,120,1800:0,149,255:40,0 chr1 178754692 . G . PASS END=178754742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:75:0,120,1800:0,218,255:40,0 chr1 178777180 . G . PASS END=178777263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,155,255:40,0 chr1 178780450 . G . PASS END=178780539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:57:0,120,1800:0,143,255:40,0 chr1 178790747 . A . PASS END=178790839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,102,1208:0,102,255:40,0 chr1 178802559 . T . PASS END=178802685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:51:0,111,1665:0,128,255:40,0 chr1 178820264 . T . PASS END=178820451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:85:35:0,85,1288:0,85,255:40,0 chr1 178821818 . C . PASS END=178821818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 178821819 . T . PASS END=178821829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 178821830 . C . PASS END=178821834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 178821835 . T . PASS END=178821835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 178821836 . C . PASS END=178821838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 178821839 . T . PASS END=178821839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 178821840 . G . PASS END=178822088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:96:33:0,96,1246:0,99,255:40,0 chr1 178822729 . C . PASS END=178822907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:38:0,84,1260:0,98,255:40,0 chr1 178822908 . A . PASS END=178822917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,1080:0,63,255:25,0 chr1 178822918 . T . PASS END=178822922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,71,255:19,0 chr1 178834089 . C . PASS END=178834565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:40:0,102,1283:0,102,255:40,0 chr1 178834566 . C . PASS END=178834602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,158,255:40,0 chr1 178834603 . T C, 49.83 PASS DP=59;MQ=250.00;MQRankSum=6.580;ReadPosRankSum=1.070;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,28,0:0.475,0.000:59:14,14,0:17,14,0:48:85,0,50,977,1035,2012:255,0,255:31,0:4.9832e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,13,11,17:13,18,15,13 chr1 178834604 . T . PASS END=178834640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,147,255:40,0 chr1 178834641 . C . PASS END=178834894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:84:36:0,84,1260:0,95,255:40,1 chr1 178834895 . C . PASS END=178834904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1008:0,70,255:25,0 chr1 178834905 . T . PASS END=178834905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:21,0 chr1 178834906 . C . PASS END=178834907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr1 178834908 . T . PASS END=178834908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 178834909 . C . PASS END=178834911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:23,0 chr1 178846633 . G . PASS END=178846770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:53:0,120,1800:0,152,255:40,0 chr1 178848037 . A . PASS END=178848127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,122,255:40,0 chr1 178852601 . G . PASS END=178852668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:43:0,93,1537:0,93,255:40,0 chr1 178854211 . G . PASS END=178854392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:86:34:0,86,1217:0,86,255:40,0 chr1 178855104 . T . PASS END=178855110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 178855111 . C . PASS END=178855111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 178855112 . A . PASS END=178855112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 178855113 . T . PASS END=178855180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1105:0,80,255:40,0 chr1 178855181 . A . PASS END=178855181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:36,0 chr1 178855182 . T . PASS END=178855233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:33:0,81,1157:0,82,255:38,0 chr1 178855234 . C . PASS END=178855234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 178855235 . T . PASS END=178855235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr1 178855236 . T . PASS END=178855254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 178855255 . G . PASS END=178855255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 178858777 . G . PASS END=178858796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:70:0,120,1800:0,200,255:40,0 chr1 178858797 . C . PASS END=178858831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:75:0,120,1800:0,221,255:40,0 chr1 178861365 . G . PASS END=178861442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,116,1590:0,116,255:40,0 chr1 178863054 . T . PASS END=178863159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,179,255:40,0 chr1 178866799 . G . PASS END=178866891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,137,255:40,0 chr1 178871241 . T . PASS END=178871254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1103:0,82,255:39,0 chr1 178871255 . C . PASS END=178871346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,120,1800:0,121,255:40,0 chr1 178875911 . G . PASS END=178876002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:60:0,120,1800:0,172,255:40,0 chr1 178885465 . G . PASS END=178885494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,165,255:40,0 chr1 179012983 . A . PASS END=179013041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1064:0,80,255:32,0 chr1 179013042 . C . PASS END=179013044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 179013045 . A . PASS END=179013046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 179013047 . T . PASS END=179013047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr1 179013048 . T . PASS END=179013061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1103:0,80,255:31,0 chr1 179013062 . A . PASS END=179013062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr1 179013063 . C . PASS END=179013151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1350:0,87,255:40,0 chr1 179013152 . A . PASS END=179013152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:32,0 chr1 179013153 . C . PASS END=179013166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1144:0,88,255:33,0 chr1 179013167 . C . PASS END=179013175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,99,255:33,0 chr1 179013176 . A . PASS END=179013176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1263:0,61,255:31,0 chr1 179013177 . G . PASS END=179013203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:35:0,81,1343:0,81,255:37,0 chr1 179013204 . G A, 42.79 PASS DP=37;MQ=231.50;MQRankSum=1.352;ReadPosRankSum=0.907;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,13,0:0.351,0.000:37:15,5,0:9,8,0:42:78,0,50,465,850,1315:255,0,255:22,0:4.2793e+01,2.5007e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,6,7:9,15,8,5 chr1 179013205 . G . PASS END=179013241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:35:0,86,1303:0,86,255:37,0 chr1 179013242 . T . PASS END=179013284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1272:0,92,255:36,0 chr1 179013285 . G . PASS END=179013285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr1 179013286 . G . PASS END=179013309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1150:0,80,255:32,0 chr1 179013310 . G . PASS END=179013313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1086:0,74,255:26,0 chr1 179013314 . T . PASS END=179013316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 179013317 . T . PASS END=179013319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 179013320 . T . PASS END=179013320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:23,0 chr1 179013321 . A . PASS END=179013331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,945:0,65,255:24,0 chr1 179013332 . G . PASS END=179013332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 179013333 . C . PASS END=179013337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,840:0,72,255:24,0 chr1 179013338 . A . PASS END=179013339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 179013340 . G . PASS END=179013350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 179013351 . A . PASS END=179013351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:20,0 chr1 179013352 . C . PASS END=179013359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 179013908 . G . PASS END=179013976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,2:107:99:96:0,120,1800:0,255,255:40,0 chr1 179019414 . G . PASS END=179019500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,111,1665:0,118,255:40,0 chr1 179023664 . G . PASS END=179023759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,86,255:40,0 chr1 179023760 . C . PASS END=179023773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:26:0,66,990:0,78,255:26,0 chr1 179033062 . G . PASS END=179033233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:37:0,90,1350:0,111,255:40,0 chr1 179033440 . G . PASS END=179033596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1197:0,81,255:40,0 chr1 179033597 . G . PASS END=179033617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:64:27:0,64,915:0,64,255:26,0 chr1 179033618 . G . PASS END=179033618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 179033619 . A . PASS END=179033631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:26,0 chr1 179035935 . C . PASS END=179035994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:37:0,97,1289:0,97,255:40,0 chr1 179041048 . C . PASS END=179041048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 179041049 . A . PASS END=179041056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,892:0,61,255:26,0 chr1 179041057 . G . PASS END=179041059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 179041060 . C . PASS END=179041060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 179041061 . A . PASS END=179041061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr1 179041062 . C . PASS END=179041062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,955:0,73,255:29,0 chr1 179041063 . C . PASS END=179041070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1064:0,90,255:30,0 chr1 179041071 . G . PASS END=179041071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1103:0,60,255:31,0 chr1 179041072 . A . PASS END=179041237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:33:0,86,1217:0,86,255:40,0 chr1 179041238 . A . PASS END=179041253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:29,0 chr1 179041254 . A . PASS END=179041254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:20,0 chr1 179041255 . C . PASS END=179041261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 179041262 . C . PASS END=179041262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 179041263 . C . PASS END=179041265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 179041266 . T . PASS END=179041266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,652:0,19,255:17,0 chr1 179041267 . C . PASS END=179041279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,759:0,50,255:19,0 chr1 179051264 . A . PASS END=179051299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr1 179051300 . T C, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,6,0:0,6,0:33:121,36,0,462,36,462:255,36,0:0,0:8.3118e+01,3.3118e+01,2.1195e-03,4.5000e+02,6.7888e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,6:0,0,4,8 chr1 179051301 . T . PASS END=179051337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 179051338 . C . PASS END=179051339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 179051340 . C . PASS END=179051343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 179051344 . C . PASS END=179051371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 179051372 . G . PASS END=179051374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 179051375 . T . PASS END=179051375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 179051376 . C . PASS END=179051377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 179051378 . G . PASS END=179051380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 179051381 . T . PASS END=179051389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:12,0 chr1 179051390 . C . PASS END=179051390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 179051391 . C . PASS END=179051396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 179051397 . T . PASS END=179051408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 179051409 . A . PASS END=179051445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 179051446 . G . PASS END=179051446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 179051447 . T . PASS END=179051463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 179051464 . C . PASS END=179051486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 179051487 . G . PASS END=179051509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,210:6,0 chr1 179051510 . A . PASS END=179051517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 179051518 . C . PASS END=179051522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 179051854 . C . PASS END=179051859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1149:0,82,255:31,0 chr1 179051860 . G . PASS END=179051860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:29,0 chr1 179051861 . G . PASS END=179051876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr1 179051877 . C . PASS END=179051883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1108:0,77,255:26,0 chr1 179051884 . G . PASS END=179051885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 179051886 . T . PASS END=179051886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 179051887 . G . PASS END=179051888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:27,0 chr1 179052075 . G . PASS END=179052078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,714:0,57,255:19,0 chr1 179052079 . G . PASS END=179052083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 179052084 . T . PASS END=179052084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 179052085 . T . PASS END=179052138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr1 179052139 . C . PASS END=179052139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 179052140 . A . PASS END=179052140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 179052141 . A . PASS END=179052142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 179052143 . G . PASS END=179052149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 179052150 . G . PASS END=179052150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr1 179052151 . C . PASS END=179052155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 179052156 . G . PASS END=179052181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,698:0,44,255:19,0 chr1 179052182 . T . PASS END=179052182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr1 179052183 . T . PASS END=179052188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 179054714 . A . PASS END=179054729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,131,255:40,0 chr1 179054730 . C . PASS END=179054804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:88:42:0,88,1504:0,88,255:40,0 chr1 179054805 . T . PASS END=179054805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1429:0,71,255:37,0 chr1 179054806 . G . PASS END=179054964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:34:0,85,1294:0,85,255:40,0 chr1 179054965 . C . PASS END=179054966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 179054967 . G . PASS END=179054968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,86,255:28,0 chr1 179054969 . G . PASS END=179054986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:25,0 chr1 179054987 . A . PASS END=179055000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:19,0 chr1 179055001 . T . PASS END=179055004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:15:18:0,15,598:0,15,255:17,0 chr1 179055005 . C . PASS END=179055019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 179055020 . C . PASS END=179055028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 179057046 . G . PASS END=179057046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 179057047 . A . PASS END=179057047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 179057048 . G . PASS END=179057073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 179057074 . C . PASS END=179057113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,739:0,60,255:23,0 chr1 179057114 . A . PASS END=179057114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 179057115 . G . PASS END=179057122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,876:0,61,255:25,0 chr1 179057123 . G . PASS END=179057123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 179057124 . C . PASS END=179057124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:25,0 chr1 179057125 . T . PASS END=179057128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:30,0 chr1 179057129 . C . PASS END=179057131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 179057132 . A . PASS END=179057145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1135:0,93,255:31,0 chr1 179057146 . T . PASS END=179057172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,71,255:26,0 chr1 179057173 . C . PASS END=179057173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 179057174 . C . PASS END=179057177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 179057178 . G . PASS END=179057178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 179057179 . A . PASS END=179057187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 179057188 . G . PASS END=179057190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 179057191 . C . PASS END=179057195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 179057196 . T . PASS END=179057224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,662:0,54,255:19,0 chr1 179063228 . T . PASS END=179063228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 179063229 . A . PASS END=179063229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:20,0 chr1 179063230 . A . PASS END=179063260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,848:0,61,255:30,0 chr1 179063261 . C . PASS END=179063263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1081:0,93,255:31,0 chr1 179063264 . A . PASS END=179063264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 179063265 . A . PASS END=179063268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1127:0,93,255:31,0 chr1 179063269 . T . PASS END=179063269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 179063270 . G . PASS END=179063277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1148:0,83,255:33,0 chr1 179063278 . C . PASS END=179063278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:31,0 chr1 179063279 . T . PASS END=179063306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1133:0,82,255:34,0 chr1 179063307 . G . PASS END=179063307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 179063308 . A . PASS END=179063310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 179063311 . A . PASS END=179063311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 179063312 . C . PASS END=179063322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:28,0 chr1 179063323 . A . PASS END=179063345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:25:0,66,990:0,68,255:27,0 chr1 179063346 . A . PASS END=179063346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 179063347 . C . PASS END=179063352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:23,0 chr1 179064103 . A . PASS END=179064106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 179064107 . T . PASS END=179064108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:13,0 chr1 179064109 . G . PASS END=179064111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 179064112 . T . PASS END=179064112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 179064113 . T . PASS END=179064113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 179064114 . G . PASS END=179064114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 179064115 . G . PASS END=179064119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,704:0,44,255:18,0 chr1 179064120 . A . PASS END=179064120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 179064121 . G . PASS END=179064124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr1 179064125 . T . PASS END=179064125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:17,0 chr1 179064126 . C . PASS END=179064138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 179064139 . A . PASS END=179064141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr1 179064142 . T . PASS END=179064142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 179064143 . G . PASS END=179064143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 179064144 . A . PASS END=179064144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 179064145 . T . PASS END=179064150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 179064151 . A . PASS END=179064151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 179064152 . C . PASS END=179064176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,870:0,61,255:25,0 chr1 179064177 . T . PASS END=179064177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 179064178 . A . PASS END=179064183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,925:0,78,255:26,0 chr1 179064184 . A . PASS END=179064184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 179064185 . C . PASS END=179064185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 179064186 . G . PASS END=179064186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 179064187 . T . PASS END=179064187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 179064188 . G . PASS END=179064188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 179064189 . A . PASS END=179064189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 179064190 . G . PASS END=179064191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 179064192 . C . PASS END=179064192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr1 179064193 . T . PASS END=179064332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1158:0,83,255:40,0 chr1 179064333 . A . PASS END=179064341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:32:0,72,1080:0,91,255:26,0 chr1 179064342 . T . PASS END=179064342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 179064343 . T . PASS END=179064343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 179064344 . C . PASS END=179064352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 179064353 . A . PASS END=179064353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 179066963 . G . PASS END=179067002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1260:0,87,255:40,0 chr1 179067003 . G . PASS END=179067007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,70,255:22,0 chr1 179067008 . C . PASS END=179067011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:22,0 chr1 179076853 . C . PASS END=179076853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 179076854 . T . PASS END=179076855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 179076856 . C . PASS END=179076904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1144:0,80,255:34,0 chr1 179076905 . A . PASS END=179076905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr1 179076906 . G . PASS END=179076909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1294:0,102,255:34,0 chr1 179076910 . A . PASS END=179076910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1121:0,63,255:31,0 chr1 179076911 . G . PASS END=179077052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,988:0,81,255:39,0 chr1 179077053 . G . PASS END=179077077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:27:0,65,937:0,65,255:26,0 chr1 179077078 . C . PASS END=179077080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179077081 . G . PASS END=179077083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr1 179077084 . G . PASS END=179077091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179077092 . C . PASS END=179077095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:65:27:0,65,969:0,65,255:26,0 chr1 179077096 . T . PASS END=179077136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1066:0,80,255:35,0 chr1 179077137 . G . PASS END=179077137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 179077138 . G . PASS END=179077152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:30,0 chr1 179077153 . T . PASS END=179077153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr1 179077154 . T . PASS END=179077162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 179077163 . G . PASS END=179077184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,892:0,61,255:26,0 chr1 179077185 . T . PASS END=179077185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 179077186 . G . PASS END=179077233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,773:0,66,255:25,0 chr1 179077234 . G . PASS END=179077234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 179077235 . G . PASS END=179077239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 179077240 . C . PASS END=179077243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 179077244 . A . PASS END=179077244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:16,0 chr1 179077245 . T . PASS END=179077250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 179077251 . A . PASS END=179077251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 179077252 . T . PASS END=179077256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 179077257 . G . PASS END=179077258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 179077259 . A . PASS END=179077265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,767:0,50,255:19,0 chr1 179077266 . C . PASS END=179077266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 179077267 . T . PASS END=179077267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 179077268 . T . PASS END=179077272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr1 179077273 . T . PASS END=179077273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 179077274 . G . PASS END=179077295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,984:0,65,255:26,0 chr1 179077296 . C . PASS END=179077296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179077297 . T . PASS END=179077297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 179077298 . T . PASS END=179077300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179077301 . C . PASS END=179077316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,947:0,78,255:26,0 chr1 179077317 . C . PASS END=179077317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 179077318 . G . PASS END=179077318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 179077319 . C . PASS END=179077325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 179077326 . C . PASS END=179077326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr1 179077327 . T . PASS END=179077328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 179077329 . C . PASS END=179077330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,960:0,60,255:29,0 chr1 179077331 . T . PASS END=179077332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 179077333 . C . PASS END=179077333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 179077334 . T . PASS END=179077344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1035:0,87,255:30,0 chr1 179077345 . C . PASS END=179077345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 179077346 . T . PASS END=179077360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 179077361 . G . PASS END=179077361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr1 179077362 . A . PASS END=179077362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179077363 . C . PASS END=179077380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,976:0,68,255:26,0 chr1 179077381 . A . PASS END=179077381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:23,0 chr1 179077382 . G . PASS END=179077385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,779:0,61,255:25,0 chr1 179077386 . G . PASS END=179077386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 179077387 . C . PASS END=179077389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 179077390 . T . PASS END=179077390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 179077391 . T . PASS END=179077395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:23,0 chr1 179077396 . A . PASS END=179077396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:19,0 chr1 179077397 . G . PASS END=179077402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:21,0 chr1 179077403 . G . PASS END=179077404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,889:0,42,255:23,0 chr1 179077405 . G . PASS END=179077405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 179077406 . C . PASS END=179077406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,809:0,26,255:20,0 chr1 179077407 . A . PASS END=179077407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:19,0 chr1 179077408 . G . PASS END=179077408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,801:0,36,255:21,0 chr1 179077409 . A . PASS END=179077409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:20,0 chr1 179077410 . T . PASS END=179077410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 179077411 . G . PASS END=179077411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 179077412 . G . PASS END=179077412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 179077413 . A . PASS END=179077417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,795:0,33,255:21,0 chr1 179077418 . T . PASS END=179077418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:19,0 chr1 179077419 . G . PASS END=179077419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 179077420 . C . PASS END=179077420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:16:24:0,16,709:0,16,255:17,0 chr1 179077421 . T . PASS END=179077422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:33:24:0,33,800:0,33,255:20,0 chr1 179077423 . C . PASS END=179077423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:19,0 chr1 179077424 . A . PASS END=179077424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:19,0 chr1 179077425 . G . PASS END=179077425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,841:0,39,255:20,0 chr1 179077426 . T . PASS END=179077426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,754:0,20,255:18,0 chr1 179077427 . A . PASS END=179077427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:20,0 chr1 179077428 . G . PASS END=179077428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 179077429 . T . PASS END=179077429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 179077430 . C . PASS END=179077431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:22:0,33,676:0,33,255:20,0 chr1 179077432 . C . PASS END=179077432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,670:0,13,255:20,0 chr1 179077433 . A . PASS END=179077433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,723:0,30,255:20,0 chr1 179077434 . T . PASS END=179077434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,670:0,13,255:19,0 chr1 179077435 . C . PASS END=179077435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 179077436 . A . PASS END=179077437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,654:0,13,255:17,0 chr1 179077438 . T . PASS END=179077438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr1 179077439 . G . PASS END=179077439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 179077440 . G . PASS END=179077449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,829:0,66,255:23,0 chr1 179077450 . T . PASS END=179077450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 179077451 . G . PASS END=179077471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:24:0,67,833:0,67,255:26,0 chr1 179077472 . C . PASS END=179077472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 179077473 . G . PASS END=179077473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 179077474 . T . PASS END=179077475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 179077476 . G . PASS END=179077484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr1 179077485 . C . PASS END=179077485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 179077486 . C . PASS END=179077490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,856:0,64,255:26,0 chr1 179077491 . C . PASS END=179077491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179077492 . T . PASS END=179077492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 179077493 . C . PASS END=179077493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179077494 . C . PASS END=179077495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 179077496 . G . PASS END=179077515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1133:0,83,255:33,0 chr1 179077516 . A . PASS END=179077516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:29,0 chr1 179077517 . G . PASS END=179077521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr1 179077522 . G . PASS END=179077522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:31,0 chr1 179077523 . A . PASS END=179077540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1140:0,83,255:32,0 chr1 179077541 . T . PASS END=179077541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:29,0 chr1 179077542 . G . PASS END=179077553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 179077554 . C . PASS END=179077554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 179077555 . A . PASS END=179077577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1135:0,80,255:32,0 chr1 179077578 . T . PASS END=179077579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 179077580 . T . PASS END=179077585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 179077586 . A . PASS END=179077586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 179077587 . G . PASS END=179077587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 179077588 . A . PASS END=179077588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 179077589 . G . PASS END=179077594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1056:0,87,255:31,0 chr1 179077595 . G . PASS END=179077638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,61,255:26,0 chr1 179077639 . G . PASS END=179077639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:19,0 chr1 179077640 . G . PASS END=179077641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 179077642 . G . PASS END=179077643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 179077644 . C . PASS END=179077645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr1 179077646 . G . PASS END=179077649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 179077650 . T . PASS END=179077650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 179077651 . G . PASS END=179077670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 179077671 . G . PASS END=179077674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 179077675 . C . PASS END=179077688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,885:0,72,255:26,0 chr1 179077689 . G . PASS END=179077691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 179077692 . C . PASS END=179077755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,917:0,75,255:26,0 chr1 179077756 . A . PASS END=179077756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 179077757 . G . PASS END=179077789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,61,255:26,0 chr1 179077790 . A . PASS END=179077790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 179077791 . T . PASS END=179077791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:16,0 chr1 179077792 . G . PASS END=179077796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,713:0,49,255:18,0 chr1 179077797 . G . PASS END=179077804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 179077805 . G . PASS END=179077806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 179077807 . G . PASS END=179077807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 179077808 . G . PASS END=179077808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 179077809 . G . PASS END=179077809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 179077810 . T . PASS END=179077810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 179077811 . G . PASS END=179077816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,845:0,69,255:23,0 chr1 179077817 . A . PASS END=179077817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 179077818 . G . PASS END=179077823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 179077824 . G . PASS END=179077860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr1 179077861 . T . PASS END=179077861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:17,0 chr1 179077862 . C . PASS END=179077874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:18,0 chr1 179077875 . G . PASS END=179077881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:24,0 chr1 179077882 . A . PASS END=179077882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 179077883 . C . PASS END=179077907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr1 179077908 . T . PASS END=179077908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr1 179077909 . G . PASS END=179077910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:27:0,69,1016:0,71,255:24,0 chr1 179077911 . C . PASS END=179077921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1003:0,87,255:29,0 chr1 179077922 . T . PASS END=179077922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 179077923 . C . PASS END=179077926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 179077927 . A . PASS END=179077927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr1 179077928 . T . PASS END=179077933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:30,0 chr1 179077934 . T . PASS END=179077934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 179077935 . C . PASS END=179077942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 179077943 . G . PASS END=179077943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 179077944 . A . PASS END=179077953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:36,0 chr1 179077954 . C . PASS END=179077954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:34,0 chr1 179077955 . A . PASS END=179078117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1202:0,83,255:40,0 chr1 179078118 . C . PASS END=179078131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr1 179078132 . A . PASS END=179078132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 179078133 . T . PASS END=179078160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1127:0,93,255:32,0 chr1 179078161 . G . PASS END=179078167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:24,0 chr1 179078168 . C . PASS END=179078168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:20,0 chr1 179078169 . A . PASS END=179078169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:26:31:0,26,772:0,26,255:20,0 chr1 179078170 . C . PASS END=179078171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:54:31:0,54,810:0,76,255:18,0 chr1 179078172 . C . PASS END=179078172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:21,0 chr1 179078173 . A . LowGQ END=179078173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,11:34:0:34:0,0,601:167,0,255:18,0 chr1 179078174 . C . PASS END=179078178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:57:34:0,57,855:0,89,255:19,0 chr1 179078179 . A . LowGQ END=179078180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,10:35:0:35:0,0,574:184,0,255:17,0 chr1 179078181 . C . PASS END=179078181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:51:35:0,51,765:0,105,255:17,0 chr1 179078182 . A . LowGQ END=179078184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,7:31:0:29:0,0,557:51,0,255:17,0 chr1 179078185 . G . PASS END=179078185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:29:0,45,675:0,70,255:15,0 chr1 179078186 . C . LowGQ END=179078186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,7:29:0:29:0,0,677:29,0,255:15,0 chr1 179078187 . C . PASS END=179078187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:48:28:0,48,720:0,50,255:15,0 chr1 179078188 . A . LowGQ END=179078188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,8:28:0:28:0,0,512:113,0,255:13,0 chr1 179078189 . C . PASS END=179078189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:39:27:0,39,585:0,81,255:13,0 chr1 179078190 . T . LowGQ END=179078191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,521:2,0,255:12,0 chr1 179078192 . C . PASS END=179078192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,754:0,31,255:12,0 chr1 179078193 . C . PASS END=179078196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:26:0,42,630:0,51,255:14,0 chr1 179078197 . A . LowGQ END=179078197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,10:26:0:26:0,0,180:255,0,255:13,1 chr1 179078198 . C . PASS END=179078198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:42:26:0,42,630:0,43,255:14,1 chr1 179078199 . C . PASS END=179078199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:15,0 chr1 179078200 . C . PASS END=179078202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:18,0 chr1 179078203 . A . LowGQ END=179078203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,8:25:0:25:0,0,252:227,0,255:17,0 chr1 179078204 . C . PASS END=179078205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 179078206 . A . LowGQ END=179078206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,6:26:0:26:0,0,464:132,0,255:19,0 chr1 179078207 . C . PASS END=179078208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr1 179078209 . G . LowGQ END=179078210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,7:27:0:27:0,0,434:108,0,255:20,0 chr1 179078211 . C . PASS END=179078211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,64,255:19,0 chr1 179078212 . G . LowGQ END=179078213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,7:28:0:27:0,0,557:32,0,255:19,0 chr1 179078214 . C . PASS END=179078214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,67,255:20,0 chr1 179078215 . A . LowGQ END=179078217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,7:30:0:28:0,0,657:7,0,255:21,0 chr1 179078218 . A . PASS END=179078218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,881:0,24,255:22,0 chr1 179078219 . C . LowGQ END=179078219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,6:30:0:30:0,0,779:31,0,255:21,0 chr1 179078220 . A . PASS END=179078220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,912:0,24,255:21,0 chr1 179078221 . G . LowGQ END=179078221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,6:30:0:30:0,0,779:31,0,255:20,0 chr1 179078222 . A . PASS END=179078222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:18:28:0,18,826:0,18,255:22,0 chr1 179078223 . G . LowGQ END=179078223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,781:10,0,255:23,0 chr1 179078224 . G . PASS END=179078224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:24,0 chr1 179078225 . T . PASS END=179078225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,840:0,4,255:22,0 chr1 179078226 . T . PASS END=179078227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,806:0,21,255:22,0 chr1 179078228 . C . PASS END=179078228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,70,255:23,0 chr1 179078229 . T . PASS END=179078229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,826:0,4,255:20,0 chr1 179078230 . C . PASS END=179078230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 179078231 . T . LowGQ END=179078231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,803:18,0,255:20,0 chr1 179078232 . G . PASS END=179078233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:33:35:0,33,1031:0,33,255:27,0 chr1 179078234 . G . PASS END=179078235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:22:35:0,22,1014:0,22,255:26,0 chr1 179078236 . A . LowGQ END=179078236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,910:0,0,255:25,0 chr1 179078237 . A . PASS END=179078238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,956:0,30,255:26,0 chr1 179078239 . G . LowGQ END=179078239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:35:0,0,1003:16,0,255:26,0 chr1 179078240 . C . PASS END=179078240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 179078241 . T . LowGQ END=179078241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,806:87,0,255:25,0 chr1 179078242 . C . PASS END=179078245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,82,255:26,0 chr1 179078246 . C . PASS END=179078247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 179078248 . A . LowGQ END=179078249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:34:0,0,886:61,0,255:27,0 chr1 179078250 . A . PASS END=179078250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1173:0,66,255:26,0 chr1 179078251 . G . LowGQ END=179078251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:0:36:0,0,1020:13,0,255:27,0 chr1 179078252 . C . PASS END=179078252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:20:36:0,20,1098:0,20,255:26,0 chr1 179078253 . A . PASS END=179078253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1069:0,17,255:26,0 chr1 179078254 . C . PASS END=179078254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:27,0 chr1 179078255 . T . LowGQ END=179078255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,912:56,0,255:27,0 chr1 179078256 . T . PASS END=179078257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:14:34:0,14,998:0,14,255:27,0 chr1 179078258 . G . PASS END=179078258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 179078259 . G . PASS END=179078259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1147:0,52,255:27,0 chr1 179078260 . T . PASS END=179078260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 179078261 . G . PASS END=179078261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,1008:0,32,255:27,0 chr1 179078262 . G . PASS END=179078262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 179078263 . C . LowGQ END=179078263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,922:37,0,255:27,0 chr1 179078264 . A . PASS END=179078264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,984:0,21,255:27,0 chr1 179078265 . C . PASS END=179078266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 179078267 . A . LowGQ END=179078268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:0:31:0,0,914:0,0,255:26,0 chr1 179078269 . A . PASS END=179078269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,930:0,24,255:27,0 chr1 179078270 . T . PASS END=179078270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,1008:0,10,255:27,0 chr1 179078271 . T . PASS END=179078271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1053:0,46,255:25,0 chr1 179078272 . C . PASS END=179078272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:16:32:0,16,997:0,16,255:25,0 chr1 179078273 . G . PASS END=179078273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:27:32:0,27,1033:0,27,255:25,0 chr1 179078274 . C . PASS END=179078275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1125:0,66,255:25,0 chr1 179078276 . T . PASS END=179078276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:8:32:0,8,921:0,8,255:24,0 chr1 179078277 . C . PASS END=179078277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1080:0,77,255:24,0 chr1 179078278 . T . LowGQ END=179078278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,906:15,0,255:25,0 chr1 179078279 . T . PASS END=179078280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1022:0,46,255:25,0 chr1 179078281 . C . PASS END=179078281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:25,0 chr1 179078282 . T . PASS END=179078282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,914:0,40,255:25,0 chr1 179078283 . G . PASS END=179078283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,951:0,27,255:25,0 chr1 179078284 . G . PASS END=179078285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1061:0,60,255:26,0 chr1 179078286 . C . PASS END=179078286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,1000:0,29,255:26,0 chr1 179078287 . A . LowGQ END=179078287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,843:21,0,255:26,0 chr1 179078288 . G . PASS END=179078288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr1 179078289 . G . PASS END=179078289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 179078290 . A . PASS END=179078290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:5:33:0,5,1045:0,5,255:30,0 chr1 179078291 . G . PASS END=179078291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:31,0 chr1 179078292 . T . PASS END=179078292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:31,0 chr1 179078293 . G . PASS END=179078555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1099:0,86,255:40,0 chr1 179078556 . C . PASS END=179078567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:29:0,60,900:0,61,255:25,0 chr1 179078568 . T . PASS END=179078569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:20,0 chr1 179078570 . A . PASS END=179078574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 179078575 . C . PASS END=179078576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 179079417 . C . PASS END=179079419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 179079420 . G . PASS END=179079426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:26,0 chr1 179079427 . A . PASS END=179079429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 179079430 . G . PASS END=179079449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,939:0,75,255:26,0 chr1 179079450 . C . PASS END=179079564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1009:0,81,255:39,0 chr1 179079565 . G . PASS END=179079590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:24,0 chr1 179079940 . T . PASS END=179079980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,151,255:40,0 chr1 179081444 . C . PASS END=179081533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,108,1620:0,114,255:40,0 chr1 179084013 . A . PASS END=179084024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,491:0,42,255:19,0 chr1 179084025 . G . PASS END=179084026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 179084027 . T . PASS END=179084027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr1 179084028 . C . PASS END=179084057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,707:0,63,255:26,0 chr1 179084058 . G . PASS END=179084065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 179084066 . C . PASS END=179084066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 179084067 . G . PASS END=179084067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 179084068 . A . PASS END=179084069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179084070 . A . PASS END=179084076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 179084077 . T . PASS END=179084084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:28,0 chr1 179084085 . G . PASS END=179084085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 179084086 . G . PASS END=179084086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 179084087 . T . PASS END=179084087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 179084088 . C . PASS END=179084089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 179084090 . T . PASS END=179084106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 179084107 . A . PASS END=179084135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,721:0,54,255:19,0 chr1 179084136 . T . PASS END=179084136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 179084137 . A . PASS END=179084143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 179084144 . T . PASS END=179084144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr1 179084145 . C . PASS END=179084155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 179084156 . A . PASS END=179084165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,495:0,31,255:12,0 chr1 179086467 . C . PASS END=179086472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr1 179086473 . C . PASS END=179086473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 179086474 . G . PASS END=179086474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr1 179086475 . T . PASS END=179086476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 179086477 . A . PASS END=179086477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 179086478 . G . PASS END=179086486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:21,0 chr1 179086487 . G . PASS END=179086487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 179086488 . A . PASS END=179086491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:21,0 chr1 179086492 . G . PASS END=179086493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:46:21:0,46,646:0,46,255:22,0 chr1 179086494 . T . PASS END=179086509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,68,255:26,0 chr1 179086510 . C . PASS END=179086530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1241:0,89,255:37,0 chr1 179086531 . A . PASS END=179086531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1276:0,78,255:35,0 chr1 179086532 . G . PASS END=179086547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1282:0,94,255:38,0 chr1 179086548 . C . PASS END=179086548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 179086549 . A . PASS END=179086635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:34:0,86,1233:0,86,255:40,0 chr1 179086636 . A . PASS END=179086636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:29,0 chr1 179086637 . C . PASS END=179086647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:31,0 chr1 179086648 . A . PASS END=179086648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr1 179086649 . T . PASS END=179086649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 179086650 . C . PASS END=179086651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 179087722 . C . PASS END=179087896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,99,1358:0,99,255:40,0 chr1 179087897 . C . PASS END=179087899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr1 179089325 . C . PASS END=179089409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,105,1575:0,113,255:40,0 chr1 179090730 . C . PASS END=179090734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:22,0 chr1 179090735 . A . PASS END=179090735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr1 179090736 . T . PASS END=179090740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr1 179090741 . T . PASS END=179090741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 179090742 . C . PASS END=179090754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:26,0 chr1 179090755 . A . PASS END=179090764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 179090765 . T . PASS END=179090765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,956:0,59,255:28,0 chr1 179090766 . C . PASS END=179090769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 179090770 . C . PASS END=179090770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 179090771 . A . PASS END=179090777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 179090778 . A . PASS END=179090778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 179090779 . A . PASS END=179090784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 179090785 . A . PASS END=179090785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,956:0,63,255:29,0 chr1 179090786 . C . PASS END=179090842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:32:0,93,1150:0,95,255:40,0 chr1 179090843 . T . PASS END=179090843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:34,0 chr1 179090844 . T . PASS END=179090849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:35:0,98,1311:0,98,255:35,0 chr1 179090850 . T . PASS END=179090850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1081:0,74,255:31,0 chr1 179090851 . T . PASS END=179090859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1211:0,91,255:34,0 chr1 179090860 . A . PASS END=179090860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr1 179090861 . T . PASS END=179090897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:34:0,84,1260:0,92,255:36,0 chr1 179090898 . G . PASS END=179090898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:32,0 chr1 179090899 . G . PASS END=179090899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 179090900 . G . PASS END=179090900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr1 179090901 . T . PASS END=179090923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:34,0 chr1 179090924 . C . PASS END=179090932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr1 179090933 . C . PASS END=179090933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:21,0 chr1 179090934 . A . PASS END=179090943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr1 179090944 . G . PASS END=179090944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179090945 . A . PASS END=179090945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 179090946 . G . PASS END=179090946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179090947 . T . PASS END=179090973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,823:0,66,255:26,0 chr1 179090974 . C . PASS END=179090974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 179090975 . T . PASS END=179090976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 179090977 . A . PASS END=179090987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:18,0 chr1 179090988 . A . PASS END=179090992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:18,0 chr1 179090993 . T . PASS END=179090993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 179090994 . C . PASS END=179090994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:11,0 chr1 179090995 . A . PASS END=179091002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:17:0,30,450:0,34,255:11,0 chr1 179095512 . C . PASS END=179095514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 179095515 . G . PASS END=179095515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 179095516 . C . PASS END=179095519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 179095520 . C . PASS END=179095526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr1 179095527 . G . PASS END=179095527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 179095528 . G . PASS END=179095528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 179095529 . T . PASS END=179095530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 179095531 . T . PASS END=179095531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 179095532 . T . PASS END=179095532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 179095533 . G . PASS END=179095533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 179095534 . A . PASS END=179095541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:19,0 chr1 179095542 . G . PASS END=179095546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:23,0 chr1 179095547 . A . PASS END=179095547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr1 179095548 . C . PASS END=179095551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 179095552 . C . PASS END=179095553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 179095554 . T . PASS END=179095583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,853:0,61,255:26,0 chr1 179095584 . C . PASS END=179095593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 179095594 . C . PASS END=179095594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 179095595 . T . PASS END=179095613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 179095614 . G . PASS END=179095615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:28,0 chr1 179095616 . A . PASS END=179095803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:28:0,83,1046:0,83,255:40,0 chr1 179095804 . T . PASS END=179095804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 179095805 . C . PASS END=179095807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 179100446 . C . PASS END=179100448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 179100449 . T . PASS END=179100449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 179100450 . A . PASS END=179100602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1055:0,84,255:40,0 chr1 179100603 . A . PASS END=179100616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:26:0,74,963:0,74,255:26,0 chr1 179102447 . C . PASS END=179102509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,165,255:40,0 chr1 179112068 . C . PASS END=179112068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 179112069 . T . PASS END=179112069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 179112070 . G . PASS END=179112070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 179112071 . T . PASS END=179112071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 179112072 . T . PASS END=179112072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 179112073 . A . PASS END=179112073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:21,0 chr1 179112074 . A . PASS END=179112074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 179112075 . G . PASS END=179112075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 179112076 . T . PASS END=179112076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 179112077 . C . PASS END=179112090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,845:0,66,255:24,0 chr1 179112091 . T . PASS END=179112091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 179112092 . C . PASS END=179112102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:26,0 chr1 179112103 . G . PASS END=179112173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1053:0,80,255:33,0 chr1 179112174 . G . PASS END=179112179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:26,0 chr1 179176263 . C . PASS END=179176302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:84:0,120,1800:0,202,255:40,0 chr1 179176303 . C . LowGQ END=179176306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,28:107:0:100:0,0,389:54,0,255:40,58 chr1 179176307 . T . PASS END=179176355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:95:79:0,95,1800:0,95,255:40,0 chr1 179176356 . T . PASS END=179176360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:80:0,120,1800:0,185,255:40,0 chr1 179176361 . A . PASS END=179176397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:77:0,120,1800:0,185,255:40,0 chr1 179176398 . G A, 50.00 PASS DP=76;MQ=249.97;MQRankSum=7.454;ReadPosRankSum=3.620;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,42,0:0.553,0.000:76:18,23,0:16,19,0:48:85,0,49,1384,1150,2534:255,0,255:33,0:5.0000e+01,7.0410e-05,5.2065e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,20,11,31:18,16,20,22 chr1 179176399 . G . PASS END=179176435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,181,255:40,0 chr1 179176436 . T . PASS END=179176482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:48:0,96,1440:0,144,255:40,0 chr1 179198376 . C . PASS END=179198376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 179198377 . A . PASS END=179198377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 179198378 . T . PASS END=179198378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,492:0,20,255:16,0 chr1 179198379 . G . PASS END=179198380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 179198381 . T . PASS END=179198381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 179198382 . G . PASS END=179198384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 179198385 . T . PASS END=179198385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 179198386 . G . PASS END=179198386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 179198387 . A . PASS END=179198388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,558:0,24,255:17,0 chr1 179198389 . G . PASS END=179198390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:18,0 chr1 179198391 . T . LowGQ END=179198391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,541:15,0,255:16,0 chr1 179198392 . A . PASS END=179198392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:18,0 chr1 179198393 . T . PASS END=179198393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,613:0,40,255:17,0 chr1 179198394 . T . PASS END=179198394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,572:0,24,255:16,0 chr1 179198395 . G . PASS END=179198395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:18,0 chr1 179198396 . A . PASS END=179198396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,596:0,10,255:17,0 chr1 179198397 . A . PASS END=179198398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:24:19:0,24,574:0,24,255:18,0 chr1 179198399 . C . PASS END=179198399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 179198400 . C . PASS END=179198400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 179198401 . G . PASS END=179198401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,582:0,2,255:17,0 chr1 179198402 . G . PASS END=179198407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,681:0,41,255:20,0 chr1 179198408 . G . PASS END=179198408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 179198409 . T . PASS END=179198409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 179198410 . G . PASS END=179198411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 179198412 . T . PASS END=179198412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 179198413 . G . PASS END=179198413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 179198414 . C . PASS END=179198414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:22,0 chr1 179198415 . G . PASS END=179198419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 179198420 . G . PASS END=179198420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 179198421 . C . PASS END=179198422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 179198423 . G . PASS END=179198424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,806:0,41,255:22,0 chr1 179198425 . G . PASS END=179198425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 179198426 . T . PASS END=179198426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr1 179198427 . C . PASS END=179198427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 179198428 . C . PASS END=179198467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr1 179198468 . A . PASS END=179198468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 179198469 . T . PASS END=179198475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 179198476 . G . PASS END=179198486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,815:0,63,255:24,0 chr1 179198487 . G . PASS END=179198487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 179198488 . C . PASS END=179198492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:26,0 chr1 179198493 . G . PASS END=179198493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 179198494 . C . PASS END=179198513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 179198514 . G . PASS END=179198514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 179198515 . G . PASS END=179198519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 179198520 . C . PASS END=179198520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 179198521 . C . PASS END=179198521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 179198522 . T . PASS END=179198522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:22,0 chr1 179198523 . G . PASS END=179198523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 179198524 . C . PASS END=179198524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:21,0 chr1 179198525 . T . PASS END=179198531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 179198532 . T . PASS END=179198532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:19,0 chr1 179271820 . A . PASS END=179271898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:51:0,115,1800:0,115,255:40,0 chr1 179271899 . G . PASS END=179271913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:61:0,120,1800:0,153,255:40,0 chr1 179271914 . A . PASS END=179271914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:68:57:0,68,1809:0,68,255:39,0 chr1 179271915 . G . PASS END=179271928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:84:52:0,84,1260:0,113,255:40,0 chr1 179271929 . C . PASS END=179271937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:60:46:0,60,900:0,111,255:24,0 chr1 179292572 . G . PASS END=179292630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,177,255:40,0 chr1 179304641 . G . PASS END=179304792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:49:0,114,1722:0,114,255:40,0 chr1 179306972 . G . PASS END=179307031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:77:0,120,1800:0,187,255:40,0 chr1 179308573 . T . PASS END=179308680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,121,255:40,0 chr1 179310163 . G . PASS END=179310164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 179310165 . T . PASS END=179310165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 179310166 . G . PASS END=179310167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 179310168 . T . PASS END=179310168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 179310169 . G . PASS END=179310411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1215:0,89,255:40,0 chr1 179310412 . A . PASS END=179310412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 179310413 . C . PASS END=179310417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 179310418 . T . PASS END=179310444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr1 179310445 . G . PASS END=179310445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 179311249 . A . PASS END=179311327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,140,255:40,0 chr1 179311997 . G . PASS END=179312078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,110,1710:0,110,255:40,0 chr1 179312725 . G . PASS END=179312751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:80:0,120,1800:0,186,255:40,0 chr1 179312752 . C T, 49.76 PASS DP=92;MQ=250.00;MQRankSum=8.200;ReadPosRankSum=4.710;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,43,0:0.473,0.000:91:19,17,0:29,26,0:48:85,0,50,1509,1651,3160:255,0,255:40,0:4.9758e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,28,22,21:29,19,28,15 chr1 179312753 . G . PASS END=179312770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:88:0,120,1800:0,246,255:40,0 chr1 179314082 . G . PASS END=179314182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:39:0,93,1395:0,113,255:40,0 chr1 179314183 . C . PASS END=179314183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:30,0 chr1 179314184 . C . PASS END=179314210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1072:0,80,255:30,0 chr1 179314211 . G . PASS END=179314211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr1 179316735 . G . PASS END=179316832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:49:0,90,1350:0,129,255:40,0 chr1 179317979 . G . PASS END=179318077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,3:69:93:44:0,93,1386:0,93,255:40,0 chr1 179319431 . T . PASS END=179319542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:97:40:0,97,1411:0,97,255:40,0 chr1 179319543 . T . PASS END=179319566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,89,255:36,0 chr1 179320452 . T . PASS END=179320597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:33:0,92,1316:0,92,255:40,0 chr1 179322720 . C . PASS END=179322776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,181,255:40,0 chr1 179335083 . A . PASS END=179335116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:43:0,97,1285:0,97,255:40,0 chr1 179335645 . A . PASS END=179335741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:37:0,96,1359:0,97,255:40,0 chr1 179337935 . G . PASS END=179337953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:34:0,96,1440:0,102,255:38,0 chr1 179337954 . G . PASS END=179337955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1240:0,78,255:39,2 chr1 179337956 . A . PASS END=179338067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:32:0,93,1395:0,96,255:40,0 chr1 179338068 . T . PASS END=179338068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 179338069 . G . PASS END=179338071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr1 179338072 . A . PASS END=179338107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr1 179339110 . G . PASS END=179339213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:33:0,87,1305:0,99,255:40,0 chr1 179347772 . G . PASS END=179347892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:36:0,90,1350:0,108,255:40,0 chr1 179348532 . C . PASS END=179348603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,184,255:40,0 chr1 179348604 . G . PASS END=179348617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,200,255:40,0 chr1 179351835 . C . PASS END=179351891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:69:0,120,1800:0,208,255:40,0 chr1 179352577 . G . PASS END=179352679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:37:0,81,1288:0,81,255:40,0 chr1 179354373 . A . PASS END=179354471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:85:44:0,85,1535:0,85,255:40,0 chr1 179354472 . G . PASS END=179354472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1474:0,74,255:35,0 chr1 179354473 . G . PASS END=179354494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1274:0,81,255:37,0 chr1 179363038 . A . PASS END=179363174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:35:0,90,1288:0,101,255:40,0 chr1 179363175 . C . PASS END=179363178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,86,255:25,0 chr1 179364233 . G . PASS END=179364325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,105,1629:0,105,255:40,2 chr1 179364326 . A . PASS END=179364326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:77:57:0,77,1959:0,77,255:40,0 chr1 179364327 . A . PASS END=179364337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,118,1800:0,118,255:40,0 chr1 179379683 . A . PASS END=179379714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,130,255:40,1 chr1 179380281 . A . PASS END=179380401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:38:0,114,1382:0,114,255:40,0 chr1 179398653 . G . PASS END=179398754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:80:0,120,1800:0,222,255:40,0 chr1 179399587 . G . PASS END=179399741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:43:0,99,1485:0,105,255:40,0 chr1 179401402 . T . PASS END=179401431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,154,255:40,0 chr1 179401432 . A . PASS END=179401477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:70:0,120,1800:0,173,255:40,0 chr1 179414105 . A C, 47.52 PASS DP=63;MQ=250.00;MQRankSum=6.592;ReadPosRankSum=2.016;FractionInformativeReads=0.968;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,25,0:0.410,0.000:61:13,16,0:23,9,0:46:82,0,50,894,1148,2042:255,0,255:35,0:4.7518e+01,9.8627e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,8,18,7:15,21,15,10 chr1 179414106 . T . PASS END=179414142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,167,255:40,0 chr1 179414143 . T . PASS END=179414339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:45:0,99,1485:0,110,255:40,0 chr1 179437578 . G . PASS END=179437776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:43:0,110,1700:0,110,255:40,2 chr1 179452263 . G . PASS END=179452343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:66:0,120,1800:0,178,255:40,0 chr1 179452344 . A . PASS END=179452356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,157,255:40,0 chr1 179460673 . A . PASS END=179460768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:34:0,99,1296:0,102,255:40,0 chr1 179460769 . G . PASS END=179460805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:57:0,120,1800:0,171,255:40,0 chr1 179460806 . C T, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.415;ReadPosRankSum=3.482;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:14,15,0:14,13,0:48:85,0,50,998,1001,1999:255,0,255:29,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,12,16:16,12,17,11 chr1 179460807 . G . PASS END=179460843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,99,1485:0,125,255:40,0 chr1 179460844 . T . PASS END=179460861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:33,0 chr1 179460862 . T . PASS END=179460862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:26,0 chr1 179460863 . A . PASS END=179460870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 179460871 . A . PASS END=179460872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 179461990 . T . PASS END=179462086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,137,255:40,0 chr1 179465052 . T . PASS END=179465082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,5:100:99:76:0,104,1800:0,104,255:40,0 chr1 179465083 . T . PASS END=179465111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:95:0,120,1800:0,149,255:40,0 chr1 179475968 . A . PASS END=179475973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,117,1668:0,117,255:40,0 chr1 179478431 . A . PASS END=179478538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:57:0,120,1800:0,133,255:40,0 chr1 179494469 . G . PASS END=179494565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:66:0,120,1800:0,150,255:40,0 chr1 179494566 . A . PASS END=179494582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:73:0,120,1800:0,201,255:40,0 chr1 179497462 . C . PASS END=179497566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:77:0,120,1800:0,232,255:40,0 chr1 179502105 . A . PASS END=179502110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,229,255:40,0 chr1 179502930 . A . PASS END=179503012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:53:0,115,1800:0,115,255:40,2 chr1 179503865 . G . PASS END=179504045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:89:45:0,89,1487:0,89,255:40,6 chr1 179504046 . G . PASS END=179504046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,7:99:72:99:0,72,3182:0,72,255:40,6 chr1 179504047 . A . PASS END=179504097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:84:0,120,1800:0,202,255:40,0 chr1 179519886 . A . PASS END=179519886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1217:0,99,255:33,0 chr1 179519968 . G . PASS END=179519968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:22,0 chr1 179520099 . G . PASS END=179520099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 179520109 . G . PASS END=179520109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr1 179520135 . C . PASS END=179520135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 179520181 . C . PASS END=179520182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 179520308 . C . PASS END=179520468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:34:0,85,1180:0,85,255:40,0 chr1 179520469 . A . PASS END=179520505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:42:0,87,1305:0,116,255:40,0 chr1 179520506 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.224;ReadPosRankSum=1.397;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,25,0:0.625,0.000:40:8,17,0:7,8,0:46:85,0,45,860,536,1396:255,0,255:12,0:5.0000e+01,1.1727e-04,4.7693e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,11,9,16:7,8,11,14 chr1 179520507 . G . PASS END=179520543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:32:0,83,1200:0,83,255:33,0 chr1 179520544 . T . PASS END=179520559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1178:0,93,255:31,0 chr1 179520560 . A . PASS END=179520584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,68,255:26,0 chr1 179520585 . A . PASS END=179520585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 179520586 . T . PASS END=179520587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 179520588 . T . PASS END=179520588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 179520595 . C . PASS END=179520595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 179520599 . T . PASS END=179520599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 179521727 . G . PASS END=179521727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 179521736 . A . PASS END=179521805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,847:0,69,255:25,0 chr1 179521806 . T . PASS END=179521817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr1 179521828 . A . PASS END=179521828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 179523611 . A . PASS END=179523666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:75:0,120,1800:0,225,255:40,0 chr1 179526160 . A . PASS END=179526162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 179526163 . T . PASS END=179526163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:20,0 chr1 179526164 . T . PASS END=179526169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:21,0 chr1 179526170 . C . PASS END=179526171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 179526172 . T . PASS END=179526173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 179526174 . G . PASS END=179526174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 179526175 . G . PASS END=179526181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 179526182 . T . PASS END=179526182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr1 179526183 . C . PASS END=179526194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:25,0 chr1 179526195 . A . PASS END=179526195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 179526196 . A . PASS END=179526198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 179526199 . A . PASS END=179526202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179526203 . C . PASS END=179526206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,955:0,67,255:26,0 chr1 179526207 . G . PASS END=179526213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 179526214 . C . PASS END=179526217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 179526218 . G . PASS END=179526229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1124:0,86,255:31,0 chr1 179526230 . G . PASS END=179526230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:44:31:0,44,1012:0,44,255:26,0 chr1 179526231 . C . PASS END=179526366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1000:0,82,255:40,0 chr1 179528814 . C . PASS END=179528880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:44:0,93,1536:0,93,255:40,2 chr1 179528881 . A . PASS END=179528881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:49:45:0,49,1359:0,49,255:39,2 chr1 179528882 . A . PASS END=179528897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:41:0,93,1338:0,93,255:40,0 chr1 179530366 . T . PASS END=179530366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:86:0,120,1800:0,241,255:40,0 chr1 179530401 . G . PASS END=179530401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:89:0,120,1800:0,229,255:40,1 chr1 179530409 . A . PASS END=179530409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 179530422 . A . PASS END=179530422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,255,255:40,0 chr1 179530424 . C . PASS END=179530496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:41:0,102,1530:0,106,255:40,0 chr1 179533783 . A . PASS END=179533783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 179533824 . C . PASS END=179533928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:75:0,120,1800:0,208,255:40,0 chr1 179533930 . T . PASS END=179533930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr1 179533984 . A . PASS END=179533984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 179544712 . T . PASS END=179544712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 179544726 . C . PASS END=179544831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:32:0,82,1157:0,82,255:40,0 chr1 179544832 . C . PASS END=179544832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1384:0,79,255:40,0 chr1 179544833 . T . PASS END=179544860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:42:0,108,1637:0,108,255:40,0 chr1 179544861 . C . PASS END=179544897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,107,1488:0,107,255:40,0 chr1 179544898 . T C, 46.29 PASS DP=40;MQ=250.00;MQRankSum=5.287;ReadPosRankSum=3.962;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,16,0:0.400,0.000:40:12,8,0:12,8,0:45:81,0,50,544,858,1402:255,0,255:24,0:4.6291e+01,1.2374e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,13,8,8:15,9,6,10 chr1 179544899 . C . PASS END=179544935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,977:0,81,255:39,0 chr1 179544936 . T . PASS END=179544939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 179544940 . C . PASS END=179544942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 179544943 . A . PASS END=179544958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:28,0 chr1 179544959 . C . PASS END=179544959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 179544960 . C . PASS END=179544961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 179544962 . C . PASS END=179544985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr1 179544986 . G . PASS END=179544999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:22:0,48,720:0,58,255:19,0 chr1 179545025 . C . PASS END=179545025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 179545078 . C . PASS END=179545078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 179561751 . A . PASS END=179561765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:17:0,43,591:0,43,255:19,0 chr1 179561766 . C . PASS END=179561770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 179561771 . A . PASS END=179561771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 179561772 . C . PASS END=179561774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr1 179561775 . G . PASS END=179561775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 179561776 . A . PASS END=179561784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 179561785 . G . PASS END=179561785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 179561786 . G . PASS END=179561789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 179561790 . G . PASS END=179561820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1048:0,87,255:32,0 chr1 179561821 . A . PASS END=179561821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr1 179561822 . T . PASS END=179561865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:33:0,91,1181:0,91,255:40,0 chr1 179561866 . T . PASS END=179561866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1156:0,78,255:35,0 chr1 179561867 . T . PASS END=179561908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:37:0,82,1245:0,82,255:38,0 chr1 179561909 . T . PASS END=179561909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1274:0,70,255:31,0 chr1 179561910 . A . PASS END=179561931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1224:0,83,255:32,0 chr1 179561932 . C . PASS END=179561934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 179561935 . A . PASS END=179561937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 179561938 . T . PASS END=179561959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr1 179561960 . A . PASS END=179561964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:23:0,42,630:0,53,255:18,0 chr1 179561965 . G . PASS END=179561978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:14:0,30,450:0,42,255:13,0 chr1 179561979 . A . PASS END=179561982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 179562595 . C . PASS END=179562595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 179562596 . C . PASS END=179562596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 179562597 . A . PASS END=179562597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 179562598 . T . PASS END=179562669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1119:0,80,255:40,0 chr1 179562670 . C . PASS END=179562706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:40:0,92,1467:0,92,255:40,0 chr1 179562707 . G A, 47.69 PASS DP=43;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=3.188;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,18,0:0.419,0.000:43:15,11,0:10,7,0:47:82,0,50,631,894,1525:255,0,255:24,0:4.7688e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,10,13,5:13,12,10,8 chr1 179562708 . A . PASS END=179562791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:43:0,84,1385:0,84,255:40,0 chr1 179562792 . G A, 48.70 PASS DP=64;MQ=250.00;MQRankSum=6.814;ReadPosRankSum=3.417;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,28,0:0.438,0.000:64:18,13,0:18,15,0:47:83,0,50,993,1251,2244:255,0,255:35,0:4.8699e+01,8.0247e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,14,19,9:18,18,14,14 chr1 179562793 . C . PASS END=179562829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,122,255:40,0 chr1 179562830 . A . PASS END=179562993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,116,1626:0,116,255:40,1 chr1 179562994 . G . PASS END=179563002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,99,1485:0,125,255:40,0 chr1 179564763 . G . PASS END=179564772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1205:0,99,255:34,0 chr1 179564773 . T . PASS END=179564773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:32,0 chr1 179564774 . A . PASS END=179564937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:89:34:0,89,1162:0,89,255:40,0 chr1 179564938 . T . PASS END=179564938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1403:0,71,255:32,0 chr1 179564939 . G . PASS END=179564939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:48:42:0,48,1352:0,48,255:32,0 chr1 179564940 . A . PASS END=179564940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:42:0,88,1504:0,88,255:31,0 chr1 179564941 . A . PASS END=179564941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1327:0,54,255:30,0 chr1 179564942 . A . PASS END=179564953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:38:0,81,1305:0,81,255:34,0 chr1 179587734 . C . PASS END=179587817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:68:0,120,1800:0,187,255:40,0 chr1 179590170 . G . PASS END=179590226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:74:0,120,1800:0,171,255:40,0 chr1 179599902 . G . PASS END=179599963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,143,255:40,0 chr1 179599964 . T . PASS END=179600000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,164,255:40,0 chr1 179600001 . A G, 48.99 PASS DP=67;MQ=249.94;MQRankSum=6.992;ReadPosRankSum=3.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,30,0:0.448,0.000:67:18,16,0:19,14,0:48:84,0,50,1023,1308,2331:255,0,255:28,0:4.8992e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,27,12,18:21,16,14,16 chr1 179600002 . A . PASS END=179600038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,135,255:40,0 chr1 179600039 . G . PASS END=179600055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1233:0,89,255:40,0 chr1 179603592 . T . PASS END=179603764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:38:0,96,1440:0,104,255:40,0 chr1 179604802 . C . PASS END=179604826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1357:0,98,255:40,0 chr1 179604827 . T . PASS END=179604863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,114,1795:0,114,255:40,0 chr1 179604864 . C T, 49.91 PASS DP=60;MQ=249.41;MQRankSum=6.183;ReadPosRankSum=3.817;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,29,0:0.483,0.000:60:20,18,0:11,11,0:48:85,0,50,1036,1101,2137:255,0,255:26,0:4.9907e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,11,18:12,19,16,13 chr1 179604865 . G . PASS END=179604901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,135,255:40,0 chr1 179604902 . T . PASS END=179605018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:38:0,87,1307:0,87,255:40,0 chr1 179605019 . T . PASS END=179605019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1270:0,78,255:33,0 chr1 179605020 . G . PASS END=179605020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 179605021 . C . PASS END=179605022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:32,0 chr1 179608974 . G . PASS END=179609125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1205:0,89,255:40,0 chr1 179609126 . T . PASS END=179609127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1299:0,78,255:33,0 chr1 179609128 . T . PASS END=179609128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 179609129 . T . PASS END=179609129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1264:0,70,255:33,0 chr1 179609130 . C . PASS END=179609140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,101,1410:0,101,255:37,0 chr1 179609141 . T . PASS END=179609141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1114:0,45,255:33,0 chr1 179609142 . T . PASS END=179609143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1382:0,86,255:34,0 chr1 179609144 . G . PASS END=179609144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:35,0 chr1 179609145 . A . PASS END=179609184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1105:0,85,255:34,0 chr1 179609185 . A . PASS END=179609185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 179609186 . A . PASS END=179609186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 179609514 . G . PASS END=179609580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,164,255:40,0 chr1 179620002 . G . PASS END=179620202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,102,1432:0,110,255:40,2 chr1 179621174 . G . PASS END=179621174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr1 179621175 . G . PASS END=179621175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 179621176 . T . PASS END=179621176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 179621177 . T . PASS END=179621180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 179621181 . G . PASS END=179621181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 179621182 . T . PASS END=179621183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 179621184 . A . PASS END=179621184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 179621185 . G . PASS END=179621197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1186:0,86,255:34,0 chr1 179621198 . G . PASS END=179621198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr1 179621199 . C . PASS END=179621313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:37:0,98,1313:0,98,255:40,0 chr1 179621314 . G . PASS END=179621314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:32,0 chr1 179621315 . A . PASS END=179621317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,95,255:28,0 chr1 179621318 . G . PASS END=179621332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:22:0,63,945:0,66,255:25,0 chr1 179623336 . C . PASS END=179623497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:55:0,113,1796:0,113,255:40,2 chr1 179631239 . G . PASS END=179631244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:26,0 chr1 179631245 . A . PASS END=179631246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,897:0,81,255:27,0 chr1 179631247 . C . PASS END=179631247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 179631248 . C . PASS END=179631421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:27:0,81,1019:0,81,255:40,0 chr1 179632483 . G . PASS END=179632626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:42:0,108,1565:0,108,255:40,0 chr1 179638329 . C . PASS END=179638335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 179638336 . A . PASS END=179638336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 179638337 . C . PASS END=179638352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:26,0 chr1 179638353 . G . PASS END=179638536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:27:0,81,994:0,81,255:40,0 chr1 179638537 . C . PASS END=179638539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:26,0 chr1 179659831 . T . PASS END=179659841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:26,0 chr1 179659842 . C . PASS END=179659844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179659845 . G . PASS END=179659845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 179659846 . A . PASS END=179659854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179659855 . A . PASS END=179659855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:26,0 chr1 179659856 . G . PASS END=179659860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 179659861 . A . PASS END=179659861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 179659862 . A . PASS END=179659876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 179659877 . C . PASS END=179659879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 179659880 . T . PASS END=179660012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,81,255:40,0 chr1 179660013 . G . PASS END=179660013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:30,0 chr1 179660014 . C . PASS END=179660019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1163:0,80,255:28,0 chr1 179660020 . T . PASS END=179660034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr1 179660035 . G . PASS END=179660036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:27:0,57,855:0,81,255:19,0 chr1 179660037 . C . PASS END=179660043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:21,0 chr1 179660044 . A . PASS END=179660060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:17,0 chr1 179660061 . A . PASS END=179660061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:13,0 chr1 179660062 . A . PASS END=179660063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 179660064 . A . PASS END=179660064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 179660065 . G . PASS END=179660073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 179660074 . C . PASS END=179660078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr1 179782233 . A . PASS END=179782303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:37:0,87,1305:0,95,255:40,0 chr1 179782304 . C . PASS END=179782325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:26,0 chr1 179782914 . T . PASS END=179782930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,560:0,41,255:19,0 chr1 179782931 . G . PASS END=179782937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:22,0 chr1 179782938 . A . PASS END=179782938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 179782939 . C . PASS END=179782961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,791:0,66,255:26,0 chr1 179782962 . G . PASS END=179782965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 179782966 . G . PASS END=179782967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 179782968 . G . PASS END=179782973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 179782974 . G . PASS END=179782975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 179782976 . C . PASS END=179782977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 179782978 . T . PASS END=179782987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 179782988 . T . PASS END=179782991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179782992 . A . PASS END=179782992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 179782993 . G . PASS END=179782995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 179782996 . G . PASS END=179782996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 179782997 . C . PASS END=179783013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:30,0 chr1 179783014 . G . PASS END=179783014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 179783015 . C . PASS END=179783021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1109:0,90,255:30,0 chr1 179783022 . C . PASS END=179783022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 179783023 . A . PASS END=179783051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 179783052 . C . PASS END=179783068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 179783069 . C . PASS END=179783069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:24,0 chr1 179783070 . T . PASS END=179783080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 179783081 . C . PASS END=179783082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 179783083 . G . PASS END=179783083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 179783084 . T . PASS END=179783091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr1 179783092 . C . PASS END=179783092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 179783093 . C . PASS END=179783093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 179783094 . G . PASS END=179783094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 179783095 . C . PASS END=179783105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 179783106 . A . PASS END=179783106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,977:0,40,255:25,0 chr1 179783107 . C . PASS END=179783107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179783108 . T . PASS END=179783114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 179783115 . T . PASS END=179783152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,675:0,43,255:19,0 chr1 179783153 . C . PASS END=179783156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 179783157 . G . PASS END=179783157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 179783158 . T . PASS END=179783158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 179783159 . G . PASS END=179783163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 179783164 . A . PASS END=179783165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr1 179783166 . G . PASS END=179783181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 179783182 . G . PASS END=179783202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 179783203 . A . PASS END=179783203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 179783204 . C . PASS END=179783206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 179783207 . C . PASS END=179783207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 179783208 . A . LowGQ END=179783208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,335:3,0,255:10,0 chr1 179783209 . A . PASS END=179783218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 179783219 . A . PASS END=179783219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 179783220 . C . PASS END=179783221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 179783222 . C . PASS END=179783222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 179783223 . C . PASS END=179783229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr1 179783230 . T . PASS END=179783234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 179783235 . T . PASS END=179783235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,338:0,25,255:13,0 chr1 179783236 . T . PASS END=179783236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:12,0 chr1 179783237 . G . PASS END=179783241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 179783242 . C . PASS END=179783242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 179783243 . A . PASS END=179783269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,523:0,45,255:16,0 chr1 179783270 . A . PASS END=179783273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:17:0,36,540:0,38,255:13,0 chr1 179783274 . T . PASS END=179783274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,474:0,21,255:11,0 chr1 179783275 . C . PASS END=179783276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 179783277 . G . PASS END=179783305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 179783306 . T . PASS END=179783324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,419:0,36,255:13,0 chr1 179815206 . T . PASS END=179815217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 179815218 . C . PASS END=179815548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:27:0,81,1008:0,81,255:40,0 chr1 179815549 . T . PASS END=179815549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 179815550 . T . PASS END=179815553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 179815554 . A . PASS END=179815556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 179815557 . C . PASS END=179815560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:27,0 chr1 179815561 . T . PASS END=179815579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 179815580 . C . PASS END=179815587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 179815588 . T . PASS END=179815588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 179815589 . T . PASS END=179815598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:30,0 chr1 179815599 . A . PASS END=179815599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 179815600 . C . PASS END=179815600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 179815601 . T . PASS END=179815601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 179815602 . G . PASS END=179815644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 179815645 . A . PASS END=179815645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr1 179815646 . C . PASS END=179815668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1078:0,87,255:32,0 chr1 179815669 . T . PASS END=179815669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr1 179815670 . C . PASS END=179815717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1177:0,80,255:34,0 chr1 179815718 . C . PASS END=179815719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 179815720 . G . PASS END=179815722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 179815723 . G . PASS END=179815758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,986:0,67,255:26,0 chr1 179815759 . G . PASS END=179815821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,964:0,81,255:35,0 chr1 179815822 . A . PASS END=179815822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 179815823 . A . PASS END=179815881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1231:0,86,255:36,0 chr1 179815882 . A . PASS END=179815882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr1 179815883 . C . PASS END=179815931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1350:0,90,255:40,0 chr1 179815932 . A . PASS END=179815932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:30,0 chr1 179815933 . G . PASS END=179815960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1066:0,80,255:33,0 chr1 179815961 . G . PASS END=179815961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 179815962 . G . PASS END=179815963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 179816670 . C . PASS END=179816771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:68:0,120,1800:0,138,255:40,0 chr1 179819980 . C . PASS END=179820379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:33:0,89,1225:0,89,255:40,0 chr1 179820380 . T . PASS END=179820380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1208:0,78,255:36,0 chr1 179820381 . T . PASS END=179820483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1049:0,80,255:38,0 chr1 179820484 . A . PASS END=179820484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:27,0 chr1 179820485 . A . PASS END=179820486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 179820487 . C . PASS END=179820487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1035:0,62,255:26,0 chr1 179820488 . C . PASS END=179820493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179820494 . A . PASS END=179820498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr1 179821767 . C . PASS END=179821800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:58:0,120,1800:0,159,255:40,0 chr1 179833916 . C . PASS END=179833916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 179833917 . T . PASS END=179833917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:31,0 chr1 179833918 . A . PASS END=179834306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:32:0,80,1136:0,80,255:40,0 chr1 179834307 . A . PASS END=179834311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:25,0 chr1 179851638 . A . PASS END=179851642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 179851643 . G . PASS END=179851643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 179851644 . G . PASS END=179851645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 179851646 . C . PASS END=179851660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 179851661 . A . PASS END=179851667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 179851668 . G . PASS END=179851697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,537:0,42,255:19,0 chr1 179851698 . C . PASS END=179851705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 179851706 . C . PASS END=179851829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,589:0,48,255:19,0 chr1 179851830 . G . PASS END=179851830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:15,0 chr1 179851831 . A . PASS END=179851834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:16,0 chr1 179851835 . G . PASS END=179851835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 179851836 . T . PASS END=179851900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,582:0,40,255:18,0 chr1 179851901 . A . PASS END=179851903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:15:0,39,585:0,45,255:13,0 chr1 179851904 . G . PASS END=179851906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 179851907 . C . PASS END=179851907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 179851908 . C . PASS END=179851946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:17,0 chr1 179851947 . T . PASS END=179851947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:16,0 chr1 179851948 . A . PASS END=179851978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 179851979 . G . PASS END=179851979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 179851980 . C . PASS END=179851992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:16,0 chr1 179851993 . C . PASS END=179851993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 179851994 . C . PASS END=179852006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,621:0,41,255:18,0 chr1 179852007 . A . PASS END=179852007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:16,0 chr1 179852008 . C . PASS END=179852016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 179852017 . C . PASS END=179852022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 179852023 . G . PASS END=179852023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 179852024 . C . PASS END=179852033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 179852034 . C . PASS END=179852036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 179852037 . C . PASS END=179852044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,729:0,49,255:19,0 chr1 179852045 . G . PASS END=179852045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 179852046 . C . PASS END=179852054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 179852055 . C . PASS END=179852055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:15,0 chr1 179852056 . T . PASS END=179852059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:17,0 chr1 179852060 . G . PASS END=179852060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 179852061 . C . PASS END=179852068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,524:0,48,255:17,0 chr1 179852069 . T . PASS END=179852070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 179852071 . T . PASS END=179852071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 179852072 . T . PASS END=179852072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 179852073 . A . PASS END=179852073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 179852074 . T C, 48.66 PASS DP=17;MQ=246.61;MQRankSum=2.391;ReadPosRankSum=2.879;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,7,0:0.412,0.000:17:6,3,0:4,4,0:47:83,0,50,222,358,579:212,0,255:8,0:4.8663e+01,8.0765e-05,5.3000e+01,2.2159e+02,3.9242e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,4,3:4,6,4,3 chr1 179852075 . G . PASS END=179852078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 179852079 . A . PASS END=179852079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:18,0 chr1 179852080 . G . PASS END=179852094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 179852095 . A . PASS END=179852101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 179852102 . T . PASS END=179852104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 179852105 . C . PASS END=179852106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 179852107 . C . PASS END=179852111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 179852112 . G . PASS END=179852127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,776:0,63,255:26,0 chr1 179852128 . G . PASS END=179852132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 179852133 . A . PASS END=179852133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 179852134 . G . PASS END=179852138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179852139 . A . PASS END=179852163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,992:0,68,255:26,0 chr1 179852164 . G . PASS END=179852164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179852165 . G . PASS END=179852166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 179852167 . G . PASS END=179852175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 179852176 . C . PASS END=179852176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:23,0 chr1 179852177 . C . PASS END=179852201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 179852749 . T . PASS END=179852749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 179852750 . G . PASS END=179852753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1031:0,84,255:30,0 chr1 179852754 . T . PASS END=179852754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 179852755 . G . PASS END=179852760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:31,0 chr1 179852761 . T . PASS END=179852761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 179852762 . G . PASS END=179852765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1111:0,93,255:31,0 chr1 179852766 . A . PASS END=179852766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:29,0 chr1 179852767 . A . PASS END=179852774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 179852775 . C . PASS END=179852776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1015:0,71,255:29,0 chr1 179852777 . C . PASS END=179852777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 179852778 . T . PASS END=179852779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:28,0 chr1 179852780 . T . PASS END=179852780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:27,0 chr1 179852781 . G . PASS END=179852785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 179852786 . C . PASS END=179852786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 179852787 . C . PASS END=179852790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 179852791 . A . PASS END=179852791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 179852792 . C . PASS END=179852796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr1 179852797 . A . PASS END=179852823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,840:0,65,255:26,0 chr1 179852824 . G . PASS END=179852825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:21,0 chr1 179852826 . C . PASS END=179852826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 179852827 . A . PASS END=179852827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 179852828 . A . PASS END=179852838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 179853827 . A . PASS END=179853905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,102,1332:0,108,255:40,0 chr1 179858444 . G A, 46.98 PASS DP=60;MQ=250.00;MQRankSum=6.462;ReadPosRankSum=1.901;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,23,0:0.383,0.000:60:21,18,0:16,5,0:45:82,0,47,182,182,182:255,0,255:37,0:4.6978e+01,1.3047e-04,5.0000e+01,1.8175e+02,2.1652e+02,1.8476e+02:0.00,34.77,37.78,34.77,69.54,37.78:24,13,17,6:18,19,14,9 chr1 179858445 . C . PASS END=179858481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,146,255:40,0 chr1 179858482 . C . PASS END=179858504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,156,255:40,0 chr1 179858507 . A . PASS END=179858507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 179869251 . T . PASS END=179869251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,120,1800:0,179,255:40,0 chr1 179869261 . A . PASS END=179869302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:66:0,120,1800:0,186,255:40,0 chr1 179870437 . G . PASS END=179870523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,141,255:40,0 chr1 179873101 . A . PASS END=179873157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:72:0,120,1800:0,170,255:40,0 chr1 179873162 . G . PASS END=179873162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,233,255:40,0 chr1 179876956 . A . PASS END=179876956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 179876958 . G . PASS END=179876987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:96:50:0,96,1800:0,96,255:40,0 chr1 179876988 . C G, 48.96 PASS DP=52;MQ=249.22;MQRankSum=5.619;ReadPosRankSum=1.050;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,23,0:0.442,0.000:52:13,6,0:16,17,0:48:84,0,50,822,1027,1849:255,0,255:21,0:4.8964e+01,7.6882e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,11,12:18,11,14,9 chr1 179876989 . T . PASS END=179876999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:53:0,96,1440:0,126,255:40,0 chr1 179877002 . A . PASS END=179877002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:78:51:0,78,1170:0,153,255:26,0 chr1 179877740 . G . PASS END=179877808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,109,1762:0,109,255:40,0 chr1 179877814 . T . PASS END=179877814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,108,1620:0,117,255:35,0 chr1 179882721 . C . PASS END=179882765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:98:0,120,1800:0,246,255:40,0 chr1 179883126 . C . PASS END=179883126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 179883133 . A . PASS END=179883189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,104,1566:0,104,255:40,0 chr1 179883194 . G . PASS END=179883194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 179886587 . A . PASS END=179886587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 179886588 . A . PASS END=179886591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1047:0,84,255:31,0 chr1 179886592 . A . PASS END=179886592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 179886593 . C . PASS END=179886604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1148:0,93,255:34,0 chr1 179886605 . A . PASS END=179886605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:32,0 chr1 179886606 . A . PASS END=179886697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1102:0,85,255:40,0 chr1 179886698 . A . PASS END=179886699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 179886700 . G . PASS END=179886712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1185:0,80,255:31,0 chr1 179886713 . C . PASS END=179886715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 179886716 . T . PASS END=179886716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,927:0,40,255:23,0 chr1 179886717 . T . PASS END=179886717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 179886718 . C . PASS END=179886720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 179886721 . G . PASS END=179886736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr1 179886737 . T . PASS END=179886737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 179886738 . G . PASS END=179886745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,931:0,72,255:25,0 chr1 179886746 . T . PASS END=179886746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 179886747 . T . PASS END=179886760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,917:0,62,255:25,0 chr1 179886761 . A . PASS END=179886761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 179886762 . A . PASS END=179886767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 179886768 . A . PASS END=179886774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:25:0,57,855:0,61,255:19,0 chr1 179886775 . A . PASS END=179886784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 179886785 . A . PASS END=179886785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 179886786 . A . PASS END=179886786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 179886787 . A . PASS END=179886787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:21,0 chr1 179886788 . G . PASS END=179886812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr1 179886813 . T . PASS END=179886869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1086:0,80,255:33,0 chr1 179886870 . A . PASS END=179886870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 179886871 . G . PASS END=179886891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:28,0 chr1 179886892 . T . PASS END=179886892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 179886893 . G . PASS END=179886901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 179886902 . A . PASS END=179886902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 179886903 . A . PASS END=179886903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 179886904 . C . PASS END=179886918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 179886919 . T . PASS END=179886924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 179886925 . T . PASS END=179886927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 179886928 . T . PASS END=179886934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 179886935 . G . PASS END=179886958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,65,255:25,0 chr1 179886959 . G . PASS END=179886963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 179886964 . G . PASS END=179886995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,804:0,67,255:26,0 chr1 179886996 . A . PASS END=179886996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,854:0,51,255:24,0 chr1 179886997 . C . PASS END=179887087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1099:0,80,255:40,0 chr1 179887088 . C . PASS END=179887124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:38:0,86,1376:0,86,255:40,0 chr1 179887125 . G A, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=0.963;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:12,9,0:7,10,0:48:85,0,50,679,651,1330:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,8,11:11,8,14,5 chr1 179887126 . G . PASS END=179887152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1350:0,106,255:38,0 chr1 179887153 . A . PASS END=179887153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1408:0,74,255:33,0 chr1 179887154 . C . PASS END=179887162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1312:0,90,255:40,0 chr1 179887163 . T . PASS END=179887204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:35:0,93,1333:0,95,255:39,0 chr1 179887205 . T . PASS END=179887205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:32,0 chr1 179887206 . T . PASS END=179887209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr1 179887210 . G . PASS END=179887210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1177:0,58,255:31,0 chr1 179887211 . A . PASS END=179887227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1252:0,92,255:35,0 chr1 179887228 . C . PASS END=179887228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1219:0,64,255:34,0 chr1 179887229 . T . PASS END=179887232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1374:0,111,255:37,0 chr1 179887233 . A . PASS END=179887233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1091:0,77,255:35,0 chr1 179887234 . G . PASS END=179887236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:36,0 chr1 179887237 . A . PASS END=179887237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1270:0,56,255:32,0 chr1 179887238 . A . PASS END=179887254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1192:0,92,255:36,0 chr1 179887255 . A . PASS END=179887255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1280:0,67,255:31,0 chr1 179887256 . C . PASS END=179887353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1072:0,80,255:37,0 chr1 179887354 . A . PASS END=179887374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr1 179924239 . A . PASS END=179924277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,398:0,36,255:12,0 chr1 179955316 . G . PASS END=179955389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:73:0,120,1800:0,203,255:40,0 chr1 179956375 . C . PASS END=179956421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,154,255:40,0 chr1 179959642 . C . PASS END=179959756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,116,1606:0,116,255:40,0 chr1 179961197 . A . PASS END=179961197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 179961198 . T . PASS END=179961198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 179961199 . G . PASS END=179961199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 179961200 . G . PASS END=179961222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:35,0 chr1 179961223 . G . PASS END=179961223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr1 179961224 . T . PASS END=179961311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:31:0,87,1305:0,92,255:40,0 chr1 179961312 . G . PASS END=179961312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 179961313 . A . PASS END=179961316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 179961317 . A . PASS END=179961317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:29,0 chr1 179961318 . T . PASS END=179961318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 179961319 . A . PASS END=179961319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 179961320 . A . PASS END=179961320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 179961321 . T . PASS END=179961321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 179961322 . C . PASS END=179961322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:32,0 chr1 179961323 . G . PASS END=179961323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 179961324 . T . PASS END=179961341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1033:0,82,255:31,0 chr1 179961342 . T . PASS END=179961342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1007:0,73,255:26,0 chr1 179961343 . T . PASS END=179961344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 179961345 . G . PASS END=179961354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,64,255:26,0 chr1 179961355 . A . PASS END=179961356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 179965688 . G . PASS END=179965688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 179965689 . G . PASS END=179965689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 179965690 . A . PASS END=179965695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 179965696 . A . PASS END=179965696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 179965697 . T . PASS END=179965698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 179965699 . G . PASS END=179965700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 179965701 . G . PASS END=179965701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:26,0 chr1 179965702 . C . PASS END=179965705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 179965706 . T . PASS END=179965706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr1 179965707 . T . PASS END=179966134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:87:29:0,87,1094:0,87,255:40,0 chr1 179966135 . A . PASS END=179966135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:63:49:0,63,1235:0,63,255:40,0 chr1 179966136 . C . PASS END=179966140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,111,1617:0,111,255:40,0 chr1 179966141 . A . PASS END=179966141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:50:48:0,50,1566:0,50,255:40,0 chr1 179966142 . A . PASS END=179966298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1133:0,80,255:40,0 chr1 179966299 . C . PASS END=179966306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,77,255:25,0 chr1 179966307 . A . PASS END=179966307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:21,0 chr1 179966308 . A . PASS END=179966310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,990:0,67,255:22,0 chr1 179972309 . G . PASS END=179972422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,155,255:40,0 chr1 179975589 . A . PASS END=179975677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:63:0,120,1800:0,173,255:40,0 chr1 179975678 . T . PASS END=179975702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:52:0,120,1800:0,129,255:40,0 chr1 179981064 . G . PASS END=179981071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:26,0 chr1 179981072 . C . PASS END=179981210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,1000:0,81,255:40,0 chr1 179982982 . G . PASS END=179983360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:28:0,84,1055:0,84,255:40,0 chr1 179983361 . T . PASS END=179983361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:76:55:0,76,1648:0,76,255:40,0 chr1 179983362 . G . PASS END=179983502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:47:0,97,1748:0,97,255:40,0 chr1 179983503 . G . PASS END=179983503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,8:47:8:47:0,8,1133:0,8,255:38,0 chr1 179983504 . C . PASS END=179983624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:36:0,84,1244:0,84,255:40,0 chr1 179983625 . T . PASS END=179983625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:31,0 chr1 179983626 . A . PASS END=179983627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 179983628 . G . PASS END=179983637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:30,0 chr1 179983638 . C . PASS END=179983640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 179984984 . G . PASS END=179985095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:37:0,84,1174:0,84,255:40,0 chr1 179985096 . C . PASS END=179985105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1125:0,72,255:26,0 chr1 179989084 . A . PASS END=179989093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1233:0,89,255:35,0 chr1 179989094 . A . PASS END=179989094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:34,0 chr1 179989095 . T . PASS END=179989336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:37:0,84,1313:0,84,255:40,0 chr1 179989337 . T . PASS END=179989337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:36,0 chr1 179989338 . T . PASS END=179989616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:92:36:0,92,1365:0,92,255:40,0 chr1 179989617 . A . PASS END=179989617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:43:44:0,43,1214:0,43,255:38,0 chr1 179989618 . T . PASS END=179989676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:88:35:0,88,1235:0,88,255:40,0 chr1 179989677 . C . PASS END=179989677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:35,0 chr1 179989678 . T . PASS END=179989704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:37:0,95,1303:0,95,255:40,0 chr1 179989705 . A . PASS END=179989741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,122,255:40,0 chr1 179989742 . G C, 49.72 PASS DP=49;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=4.057;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,23,0:0.469,0.000:49:7,9,0:19,14,0:48:84,0,50,815,901,1716:255,0,255:26,0:4.9718e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,11,9,14:14,12,11,12 chr1 179989743 . A . PASS END=179989779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,117,1755:0,121,255:40,0 chr1 179989780 . C . PASS END=179990144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:36:0,81,1310:0,81,255:40,0 chr1 179991833 . G . PASS END=179991841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,698:0,46,255:19,0 chr1 179991842 . A . PASS END=179991844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 179991845 . A . PASS END=179991845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:22,0 chr1 179991846 . G . PASS END=179991846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 179991847 . T . PASS END=179991854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1089:0,90,255:35,0 chr1 179991855 . A . PASS END=179991855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:34,0 chr1 179991856 . G . PASS END=179991957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:35:0,82,1296:0,82,255:40,0 chr1 179991958 . G . PASS END=179991958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:42:40:0,42,1254:0,42,255:38,3 chr1 179991959 . A . PASS END=179991959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:19:41:0,19,1294:0,19,255:38,3 chr1 179991960 . A . PASS END=179991960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1343:0,43,255:40,0 chr1 179991961 . A . PASS END=179991983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1385:0,101,255:40,0 chr1 179993554 . T . PASS END=179993712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1194:0,88,255:40,0 chr1 179993713 . A . PASS END=179993715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:33:0,72,1080:0,86,255:26,0 chr1 179993716 . A . PASS END=179993716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 179993717 . T . PASS END=179993717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 180000455 . G . PASS END=180000458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1459:0,84,255:40,2 chr1 180000459 . G . PASS END=180000459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1465:0,57,255:39,2 chr1 180000460 . G . PASS END=180000629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:87:41:0,87,1305:0,91,255:40,0 chr1 180002997 . T . PASS END=180002998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 180002999 . T . PASS END=180002999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:28,0 chr1 180003000 . C . PASS END=180003005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 180003006 . A . PASS END=180003006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 180003007 . G . PASS END=180003203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:32:0,80,1133:0,80,255:40,0 chr1 180003204 . G . PASS END=180003214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr1 180003215 . C . PASS END=180003217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:18,0 chr1 180006061 . G . PASS END=180006088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,623:0,41,255:19,0 chr1 180006089 . C . PASS END=180006102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,792:0,63,255:26,0 chr1 180006103 . C . PASS END=180006109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 180006110 . A . PASS END=180006110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 180006111 . C . PASS END=180006118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1070:0,87,255:30,0 chr1 180006119 . T . PASS END=180006119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 180006120 . C . PASS END=180006123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:31,0 chr1 180006124 . A . PASS END=180006124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 180006125 . C . PASS END=180006196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1172:0,88,255:36,0 chr1 180006197 . G . PASS END=180006208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:67:28:0,67,986:0,67,255:26,0 chr1 180006209 . A . PASS END=180006209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:24,0 chr1 180006210 . G . PASS END=180006210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,886:0,29,255:23,0 chr1 180006211 . C . PASS END=180006211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 180006212 . T . PASS END=180006213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 180006214 . A . PASS END=180006214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,846:0,39,255:24,0 chr1 180006215 . G . PASS END=180006221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr1 180006222 . A . PASS END=180006222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 180006223 . A . PASS END=180006224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,71,255:22,0 chr1 180010273 . G . PASS END=180010383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,102,1530:0,104,255:40,0 chr1 180010797 . G . PASS END=180010852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,815:0,61,255:26,0 chr1 180010853 . C . PASS END=180010854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 180010855 . T . PASS END=180010855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 180010856 . G . PASS END=180010858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 180010859 . G . PASS END=180010859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 180010860 . G . PASS END=180010865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1016:0,84,255:29,0 chr1 180010866 . A . PASS END=180010873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 180010874 . A . PASS END=180010894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 180010895 . A . PASS END=180010895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 180010896 . A . PASS END=180010898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 180010899 . G . PASS END=180010899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 180010900 . C . PASS END=180010900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180010901 . T . PASS END=180010910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,753:0,49,255:19,0 chr1 180010911 . A G, 46.09 PASS DP=23;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=1.467;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,8,0:0.364,0.000:22:6,4,0:8,4,0:45:81,0,50,257,494,751:222,0,255:11,0:4.6086e+01,1.2866e-04,5.3000e+01,2.5714e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,1,7:10,4,5,3 chr1 180010912 . C . PASS END=180010936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,621:0,41,255:17,0 chr1 180010937 . G . PASS END=180010937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 180012191 . A . PASS END=180012317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1147:0,80,255:40,0 chr1 180012318 . A . PASS END=180012318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 180012319 . A . PASS END=180012320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 180012321 . C . PASS END=180012321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 180012322 . A . PASS END=180012322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180012323 . G . PASS END=180012327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,947:0,67,255:26,0 chr1 180013186 . G . PASS END=180013308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,102,1388:0,108,255:40,0 chr1 180017671 . A . PASS END=180017840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:86:39:0,86,1358:0,86,255:40,0 chr1 180022105 . A . PASS END=180022299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:33:0,84,1260:0,99,255:40,0 chr1 180022300 . A . PASS END=180022300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:28,0 chr1 180022301 . G . PASS END=180022301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 180022885 . G . PASS END=180023047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,994:0,81,255:40,0 chr1 180023048 . C . PASS END=180023059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:32:0,69,1080:0,69,255:24,0 chr1 180023060 . A . PASS END=180023060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 180023061 . T . PASS END=180023062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 180023063 . A . PASS END=180023064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 180023065 . A . PASS END=180023068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,898:0,72,255:24,0 chr1 180023069 . A . PASS END=180023069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 180023550 . A . PASS END=180023637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:37:0,105,1459:0,107,255:40,0 chr1 180031355 . G . PASS END=180031364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:35:0,98,1304:0,98,255:37,0 chr1 180031365 . A . PASS END=180031365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 180031366 . A . PASS END=180031497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:36:0,87,1305:0,101,255:40,0 chr1 180031498 . A . PASS END=180031498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1158:0,74,255:28,0 chr1 180031499 . T . PASS END=180031501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1227:0,88,255:30,0 chr1 180034250 . G . PASS END=180034251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 180034252 . C . PASS END=180034257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,868:0,66,255:24,0 chr1 180034258 . T . PASS END=180034258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 180034259 . A . PASS END=180034263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,848:0,72,255:26,0 chr1 180034264 . T . PASS END=180034399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1019:0,81,255:40,0 chr1 180034400 . G . PASS END=180034402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 180034403 . G . PASS END=180034403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 180034404 . A . PASS END=180034407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:26,0 chr1 180042921 . A . PASS END=180043043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:90:40:0,90,1477:0,90,255:40,0 chr1 180044157 . G . PASS END=180044177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1058:0,90,255:30,0 chr1 180044178 . A . PASS END=180044178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 180044179 . A . PASS END=180044356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:30:0,81,1215:0,90,255:40,0 chr1 180047598 . A . PASS END=180047601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 180047602 . A . PASS END=180047604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 180047605 . A . PASS END=180047606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:26,0 chr1 180047607 . G . PASS END=180047784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:81:32:0,81,1057:0,82,255:40,0 chr1 180047785 . A . PASS END=180047799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:24:0,66,990:0,72,255:24,0 chr1 180047800 . T . PASS END=180047800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 180047801 . A . PASS END=180047805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 180047806 . A . PASS END=180047806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 180047807 . C . PASS END=180047807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 180047808 . A . PASS END=180047808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 180047809 . T . PASS END=180047809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,746:0,38,255:19,0 chr1 180049625 . T . PASS END=180049793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:35:0,87,1305:0,103,255:40,0 chr1 180049794 . C . PASS END=180049796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,102,255:24,0 chr1 180053153 . A . PASS END=180053153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 180053154 . A . PASS END=180053328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:90:30:0,90,1088:0,90,255:40,2 chr1 180056713 . T . PASS END=180056844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:54:0,81,1215:0,91,255:40,0 chr1 180056845 . C . PASS END=180056852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:75:30:0,75,1125:0,90,255:26,0 chr1 180059849 . A . PASS END=180059931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,132,255:40,0 chr1 180061749 . A . PASS END=180061749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 180061750 . T . PASS END=180061754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1149:0,82,255:30,0 chr1 180061755 . C . PASS END=180061755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 180061756 . A . PASS END=180061771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1305:0,93,255:40,0 chr1 180061772 . A . PASS END=180061772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1130:0,70,255:37,0 chr1 180061773 . G . PASS END=180063751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1215:0,85,255:40,2 chr1 180064658 . G . PASS END=180065065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:82:33:0,82,1180:0,82,255:40,0 chr1 180065173 . G . PASS END=180065319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,145,255:40,1 chr1 180067998 . A . PASS END=180068120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:52:0,120,1800:0,146,255:40,0 chr1 180080132 . G . PASS END=180080134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 180080135 . C . PASS END=180080146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:31,0 chr1 180080147 . G . PASS END=180080147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 180080148 . A . PASS END=180080152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1156:0,80,255:35,0 chr1 180080153 . G . PASS END=180080296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:38:0,96,1296:0,98,255:40,0 chr1 180124043 . A . PASS END=180124050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr1 180124051 . G . PASS END=180124117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 180124118 . G . PASS END=180124129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 180124130 . G . PASS END=180124139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 180124140 . C . PASS END=180124141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 180124142 . G . PASS END=180124143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 180124144 . G . PASS END=180124153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:4:0,9,135:0,12,155:3,0 chr1 180124154 . C . PASS END=180124160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 180124161 . A . PASS END=180124163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 180124164 . C . PASS END=180124169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 180124170 . C . PASS END=180124179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 180124180 . G . PASS END=180124218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 180124219 . C . PASS END=180124256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 180124257 . A . PASS END=180124288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr1 180124289 . C . PASS END=180124289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr1 180124290 . T . PASS END=180124296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:4,0 chr1 180124297 . A . PASS END=180124307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 180135626 . C . PASS END=180135634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,955:0,78,255:26,0 chr1 180135635 . C . PASS END=180135715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1041:0,80,255:33,0 chr1 180135716 . C . PASS END=180135716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 180135717 . G . PASS END=180135718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 180135719 . C . PASS END=180135726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 180144456 . T . PASS END=180144501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,132,255:40,0 chr1 180145066 . T . PASS END=180145066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 180145067 . G . PASS END=180145068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 180145069 . C . PASS END=180145069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 180145070 . T . PASS END=180145070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 180145071 . G . PASS END=180145071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:26,0 chr1 180145072 . G . PASS END=180145074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:27,0 chr1 180145075 . C . PASS END=180145075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 180145076 . T . PASS END=180145087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 180145088 . A G, 142.39 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,13,0:0,19,0:92:180,95,0,1182,95,1182:255,96,0:0,0:1.4239e+02,9.2393e+01,0.0000e+00,4.5000e+02,1.2716e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,14:0,0,15,17 chr1 180145089 . C . PASS END=180145105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1236:0,105,255:35,0 chr1 180145106 . T . PASS END=180145106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:34,0 chr1 180145107 . G . PASS END=180145125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1241:0,89,255:35,0 chr1 180145126 . A . PASS END=180145141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:32,0 chr1 180145142 . A . PASS END=180145142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:26,0 chr1 180145143 . G . PASS END=180145143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 180145144 . C . PASS END=180145158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:24,0 chr1 180145159 . A . PASS END=180145159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 180145160 . G . PASS END=180145160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 180145161 . C . PASS END=180145168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,53,255:18,0 chr1 180147929 . G . PASS END=180148019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:35:0,96,1440:0,103,255:40,0 chr1 180151309 . G . PASS END=180151309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 180151310 . T . PASS END=180151310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 180151311 . G . PASS END=180151312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,704:0,44,255:18,0 chr1 180151313 . C . PASS END=180151328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:25,0 chr1 180151329 . G . PASS END=180151330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 180151331 . A . PASS END=180151331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 180151332 . C . PASS END=180151342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,83,255:28,0 chr1 180151343 . C . PASS END=180151346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 180151347 . G . PASS END=180151348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180151349 . G . PASS END=180151349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 180151350 . C . PASS END=180151361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:30:0,84,1260:0,90,255:36,0 chr1 180151362 . C . PASS END=180151362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:33,0 chr1 180151363 . A . PASS END=180151448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1205:0,87,255:40,0 chr1 180151449 . C . PASS END=180151450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 180151451 . C . PASS END=180151451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 180151452 . C . PASS END=180151454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,102,255:26,0 chr1 180153051 . G . PASS END=180153059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,955:0,78,255:26,0 chr1 180153060 . A . PASS END=180153185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,980:0,81,255:40,0 chr1 180155188 . C . PASS END=180155199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:34:0,91,1128:0,91,255:37,0 chr1 180155200 . C . PASS END=180155200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:34,0 chr1 180155201 . A . PASS END=180155205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1335:0,95,255:37,0 chr1 180155206 . T . PASS END=180155206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1264:0,72,255:36,0 chr1 180155207 . G . PASS END=180155317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,89,255:40,0 chr1 180158687 . T . PASS END=180158688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 180158689 . T . PASS END=180158702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 180158703 . C . PASS END=180158703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:6:28:0,6,864:0,6,255:26,0 chr1 180158704 . C . PASS END=180158706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr1 180158707 . A . PASS END=180158707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,900:0,7,255:26,0 chr1 180158708 . G . PASS END=180158713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 180158714 . A . PASS END=180158714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 180158715 . A . PASS END=180158716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 180158717 . T . PASS END=180158717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 180158718 . T . PASS END=180158723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 180158724 . A . PASS END=180158724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:28,0 chr1 180158725 . C . PASS END=180158725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 180158726 . T . PASS END=180158726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 180158727 . C . PASS END=180158740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1127:0,82,255:31,0 chr1 180158741 . C . PASS END=180158741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 180158742 . T . PASS END=180158749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 180158750 . C . PASS END=180158750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 180158751 . A . PASS END=180158758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 180158759 . A . PASS END=180158772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1024:0,71,255:27,0 chr1 180158773 . C . PASS END=180158775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 180158776 . T . PASS END=180158776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:26,0 chr1 180158777 . T . PASS END=180158779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 180158780 . T . PASS END=180158801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 180158802 . G . PASS END=180158809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,853:0,58,255:19,0 chr1 180159568 . G . PASS END=180159705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:38:0,93,1395:0,101,255:40,0 chr1 180159706 . C . PASS END=180159706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:31,0 chr1 180159707 . A . PASS END=180159715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:32,0 chr1 180163348 . C . PASS END=180163351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 180163352 . G . PASS END=180163359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:17,0 chr1 180163360 . A . PASS END=180163360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 180163361 . G . PASS END=180163384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,721:0,54,255:19,0 chr1 180163385 . C . PASS END=180163387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 180163388 . G . PASS END=180163388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr1 180163389 . C . PASS END=180163392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,797:0,66,255:22,0 chr1 180163393 . A . PASS END=180163393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 180163394 . C . PASS END=180163413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:25,0 chr1 180163414 . G . PASS END=180163415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 180163416 . G . PASS END=180163433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 180163434 . A . PASS END=180163434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 180163435 . T . PASS END=180163439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 180163440 . G . PASS END=180163440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 180163441 . C . PASS END=180163455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,922:0,62,255:26,0 chr1 180163456 . G . PASS END=180163463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 180163464 . A . PASS END=180163482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,915:0,65,255:25,0 chr1 180163483 . T . PASS END=180163483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 180163484 . C . PASS END=180163485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 180163486 . G . PASS END=180163486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 180163487 . G . PASS END=180163493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 180163494 . T . PASS END=180163501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,845:0,56,255:19,0 chr1 180163502 . C . PASS END=180163505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 180163506 . A . PASS END=180163521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:18:0,47,720:0,47,255:17,0 chr1 180163522 . T . PASS END=180163522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 180163523 . T . PASS END=180163524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 180163525 . C . PASS END=180163527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 180165397 . G . PASS END=180165413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 180165414 . C . PASS END=180165417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 180165418 . A . PASS END=180165428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 180165429 . G . PASS END=180165523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,512:0,41,255:19,0 chr1 180165524 . G . PASS END=180165524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 180165525 . G . PASS END=180165557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,675:0,41,255:18,0 chr1 180165558 . T . PASS END=180165558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,471:0,37,255:15,0 chr1 180165559 . T . PASS END=180165565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,659:0,41,255:19,0 chr1 180165566 . A . PASS END=180165570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:23,0 chr1 180165571 . G . PASS END=180165571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 180165572 . G . PASS END=180165582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 180165583 . G . PASS END=180165583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:21,0 chr1 180165584 . G . PASS END=180165615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,900:0,62,255:26,0 chr1 180165616 . A . PASS END=180165616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 180165617 . G . PASS END=180165622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:25,0 chr1 180165623 . G . PASS END=180165624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 180165625 . T . PASS END=180165638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,947:0,75,255:25,0 chr1 180165639 . C . PASS END=180165642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 180165643 . A . PASS END=180165643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 180165644 . A . PASS END=180165648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:29,0 chr1 180165649 . G . PASS END=180165649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 180165650 . G . PASS END=180165656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1072:0,90,255:30,0 chr1 180165657 . A . PASS END=180165657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 180165658 . C . PASS END=180165660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 180165661 . T . PASS END=180165661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 180165662 . G . PASS END=180165677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 180165678 . G . PASS END=180165678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 180165679 . A . PASS END=180165691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:30,0 chr1 180165692 . C . PASS END=180165692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 180165693 . C . PASS END=180165703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,95,255:31,0 chr1 180165704 . C . PASS END=180165721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,953:0,60,255:26,0 chr1 180165722 . T . PASS END=180165722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:22,0 chr1 180165723 . G . PASS END=180165743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,976:0,65,255:25,0 chr1 180165744 . C . PASS END=180165744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 180165745 . C . PASS END=180165784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:26,0 chr1 180165785 . G . PASS END=180165790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 180165791 . T . PASS END=180165793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 180165794 . T . PASS END=180165794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:20,0 chr1 180165795 . G . PASS END=180165796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 180165797 . G . PASS END=180165797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 180165798 . C . PASS END=180165815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:23,0 chr1 180165816 . A . PASS END=180165816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 180165817 . G . PASS END=180165824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 180165825 . C . PASS END=180165825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr1 180165826 . A . PASS END=180165831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 180165832 . A . PASS END=180165843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,721:0,47,255:20,1 chr1 180165844 . A . PASS END=180165845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:21,1 chr1 180165846 . T . PASS END=180165855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,786:0,63,255:23,0 chr1 180165856 . G . PASS END=180165856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 180165857 . C . PASS END=180165889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:24:0,64,884:0,64,255:25,0 chr1 180165890 . G . PASS END=180165899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 180165900 . G . PASS END=180165900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 180165901 . A . PASS END=180165912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 180165913 . T . PASS END=180165913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:28,0 chr1 180165914 . C . PASS END=180165918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 180165919 . G . PASS END=180165919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 180165920 . C . PASS END=180165928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,89,255:30,0 chr1 180165929 . G . PASS END=180165937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr1 180165938 . C . PASS END=180165938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 180165939 . G . PASS END=180165946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr1 180165947 . C . PASS END=180165947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:24,0 chr1 180165948 . A . PASS END=180165967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,967:0,65,255:26,0 chr1 180165968 . C . PASS END=180165968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 180165969 . A . PASS END=180165971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 180165972 . C . PASS END=180165973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 180165974 . T . PASS END=180165981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 180165982 . A . PASS END=180165982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr1 180165983 . G . PASS END=180165984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180165985 . T . PASS END=180165985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr1 180165986 . G . PASS END=180165987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180165988 . A . PASS END=180165988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 180165989 . G . PASS END=180165992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 180165993 . C . PASS END=180166016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:19:0,47,706:0,47,255:19,0 chr1 180166017 . T . PASS END=180166028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 180166029 . C . PASS END=180166039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 180166040 . C . PASS END=180166044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180166045 . C . PASS END=180166046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 180166047 . T . PASS END=180166059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 180166060 . G . PASS END=180166061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,690:0,44,255:20,0 chr1 180166062 . C . PASS END=180166074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,806:0,62,255:24,0 chr1 180166075 . T . PASS END=180166075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:19,0 chr1 180166076 . C . PASS END=180166082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:21,0 chr1 180166083 . C . PASS END=180166083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 180166084 . T . PASS END=180166091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 180166092 . A . PASS END=180166092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 180166093 . T . PASS END=180166112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr1 180166113 . A . PASS END=180166113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 180166114 . C . PASS END=180166119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,922:0,62,255:25,0 chr1 180166120 . T . PASS END=180166120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 180166121 . C . PASS END=180166127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,931:0,75,255:25,0 chr1 180166128 . A . PASS END=180166128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:21,0 chr1 180166129 . A . PASS END=180166130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 180166131 . A . PASS END=180166131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:21,0 chr1 180166132 . T . PASS END=180166149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 180166150 . A . PASS END=180166150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 180166151 . T . PASS END=180166156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 180166157 . C . PASS END=180166172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr1 180166468 . C . PASS END=180166476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1620:0,116,255:40,0 chr1 180199444 . G . PASS END=180199444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr1 180199493 . A . PASS END=180199493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,803:0,48,255:23,0 chr1 180199531 . G . PASS END=180199531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180199544 . T . PASS END=180199544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:12,0 chr1 180199665 . A . PASS END=180199670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:33,0 chr1 180199671 . C . PASS END=180199671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:32,0 chr1 180199672 . A . PASS END=180199675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,99,1485:0,105,255:37,0 chr1 180199676 . T . PASS END=180199676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1239:0,56,255:35,0 chr1 180199677 . G . PASS END=180199740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:34:0,81,1197:0,81,255:39,0 chr1 180217420 . A . PASS END=180217436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:26,0 chr1 180217437 . G . PASS END=180217470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1054:0,80,255:32,0 chr1 180217471 . T . PASS END=180217471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 180217472 . G . PASS END=180217524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1180:0,86,255:34,0 chr1 180217525 . A . PASS END=180217582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:26,0 chr1 180217583 . C . PASS END=180217584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 180217585 . T . PASS END=180217592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 180217593 . T . PASS END=180217604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:16:0,42,630:0,48,255:15,0 chr1 180235366 . A . PASS END=180235382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 180235383 . C . PASS END=180235383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 180235384 . A . PASS END=180235388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 180235527 . G . PASS END=180235561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:26,0 chr1 180235562 . G . PASS END=180235563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 180235564 . A . PASS END=180235564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 180235565 . T . PASS END=180235579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1194:0,90,255:31,0 chr1 180235580 . T . PASS END=180235580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 180235581 . G . PASS END=180235599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1215:0,86,255:32,0 chr1 180235600 . T . PASS END=180235600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:30,0 chr1 180235601 . T . PASS END=180235702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1115:0,82,255:33,0 chr1 180235703 . A . PASS END=180235722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr1 180235723 . C . PASS END=180235729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 180235744 . C . PASS END=180235744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 180240513 . A . PASS END=180240513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 180240515 . A . PASS END=180240669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:36:0,84,1260:0,97,255:40,0 chr1 180240673 . A . PASS END=180240673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 180240969 . G . PASS END=180240970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 180240971 . T . PASS END=180240971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:21,0 chr1 180240972 . T . PASS END=180240989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,860:0,62,255:26,0 chr1 180240990 . G . PASS END=180240994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:28,0 chr1 180240995 . A . PASS END=180240995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,922:0,67,255:27,0 chr1 180240996 . A . PASS END=180241016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:30,0 chr1 180241017 . T . PASS END=180241017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 180241018 . G . PASS END=180241020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1127:0,93,255:31,0 chr1 180241021 . G . PASS END=180241021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 180241022 . G . PASS END=180241037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1133:0,80,255:34,0 chr1 180241038 . G . PASS END=180241038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 180241039 . C . PASS END=180241044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1239:0,86,255:33,0 chr1 180241045 . T . PASS END=180241045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:31,0 chr1 180241046 . A . PASS END=180241051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr1 180241052 . G . PASS END=180241052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr1 180241053 . C . PASS END=180241072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:33,0 chr1 180241073 . G . PASS END=180241073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr1 180241074 . C . PASS END=180241082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 180241083 . G . PASS END=180241095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1076:0,74,255:26,0 chr1 180241096 . T . PASS END=180241096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,807:0,48,255:20,0 chr1 180241097 . C . PASS END=180241102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:24,0 chr1 180241103 . A . PASS END=180241103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:20,0 chr1 180241104 . G . PASS END=180241104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 180241105 . G . PASS END=180241134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:19,0 chr1 180241135 . T . PASS END=180241135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 180241136 . T . PASS END=180241141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 180243320 . A . PASS END=180243714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:39:0,87,1260:0,87,255:40,0 chr1 180243722 . T . PASS END=180243722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,99,1485:0,110,255:32,0 chr1 180243731 . C . PASS END=180243731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,105,1575:0,132,255:35,0 chr1 180243742 . C . PASS END=180243742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,108,1620:0,110,255:36,0 chr1 180243805 . C . PASS END=180243805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 180243868 . A . PASS END=180243868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 180243935 . G . PASS END=180243935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 180243994 . T . PASS END=180243994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 180244003 . G . PASS END=180244003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 180244174 . G . PASS END=180244174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 180257498 . T . PASS END=180257507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,864:0,61,255:26,0 chr1 180257508 . C . PASS END=180257509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 180257510 . A . PASS END=180257510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 180257511 . G . PASS END=180257518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr1 180257519 . C . PASS END=180257519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 180257520 . C . PASS END=180257545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1099:0,83,255:32,0 chr1 180257546 . G . PASS END=180257546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 180257547 . C . PASS END=180257603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1141:0,82,255:37,0 chr1 180257604 . C . PASS END=180257615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 180257616 . A . PASS END=180257616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:25,0 chr1 180257617 . G . PASS END=180257617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 180257618 . C . PASS END=180257639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:41:18:0,41,660:0,41,255:19,0 chr1 180257640 . T . PASS END=180257640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:16,0 chr1 180257641 . C . PASS END=180257652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:18,0 chr1 180283827 . C . PASS END=180283857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:102:0,120,1800:0,255,255:40,0 chr1 180295593 . C . PASS END=180295626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:19,0 chr1 180295627 . G . PASS END=180295627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 180295628 . A . PASS END=180295628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,476:0,10,255:17,0 chr1 180295629 . G . PASS END=180295646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr1 180295647 . G . PASS END=180295647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 180295648 . C . PASS END=180295669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,831:0,69,255:23,0 chr1 180295670 . T . PASS END=180295677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 180295678 . C . PASS END=180295678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,704:0,19,255:16,0 chr1 180295679 . A . PASS END=180295679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:16,0 chr1 180295680 . T . PASS END=180295680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 180295681 . T . PASS END=180295691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:18,0 chr1 180295692 . T . PASS END=180295697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 180366651 . C . PASS END=180366651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 180366652 . T . PASS END=180366652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 180366653 . G . PASS END=180366730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1019:0,84,255:39,0 chr1 180366731 . G . PASS END=180366740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,1080:0,60,255:25,0 chr1 180366742 . T . PASS END=180366742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 180382501 . C . PASS END=180382606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:62:0,120,1800:0,141,255:40,1 chr1 180399315 . C . PASS END=180399397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:52:0,120,1800:0,148,255:40,0 chr1 180461404 . C . PASS END=180461405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 180461406 . G . PASS END=180461407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr1 180461408 . G . PASS END=180461426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,850:0,72,255:25,0 chr1 180461427 . G . PASS END=180461427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 180461428 . T . PASS END=180461428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,875:0,75,255:25,0 chr1 180461429 . T . PASS END=180461433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 180461434 . A . PASS END=180461434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 180461435 . A . PASS END=180461438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 180461439 . C . PASS END=180461440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 180461441 . G . PASS END=180461498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1140:0,80,255:34,0 chr1 180461499 . C . PASS END=180461500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 180464596 . C . PASS END=180464660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:61:0,120,1800:0,155,255:40,0 chr1 180471180 . C . PASS END=180471198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 180471199 . A . PASS END=180471200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:11:9:0,11,294:0,11,255:10,0 chr1 180471201 . G . PASS END=180471233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 180471234 . C . PASS END=180471234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 180471235 . A . PASS END=180471239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 180471240 . T . PASS END=180471243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 180471244 . A . PASS END=180471244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 180471245 . G . PASS END=180471255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 180471256 . G . PASS END=180471256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 180471257 . C . PASS END=180471262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 180471263 . C . PASS END=180471263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 180471264 . A . PASS END=180471267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 180471268 . A . PASS END=180471268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 180471269 . G . PASS END=180471286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 180471287 . T . PASS END=180471287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 180471288 . C . PASS END=180471288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 180471289 . T . PASS END=180471289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 180471290 . C . PASS END=180471331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,584:0,48,255:18,0 chr1 180471332 . C . PASS END=180471396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:13,0 chr1 180471397 . G . PASS END=180471397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 180471398 . C . PASS END=180471398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 180471399 . C . PASS END=180471401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 180601338 . A . PASS END=180601342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 180601343 . G . PASS END=180601343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 180601344 . T . PASS END=180601347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 180601348 . C . PASS END=180601348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 180601349 . C . PASS END=180601378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1102:0,83,255:33,0 chr1 180601379 . G . PASS END=180601379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:28,0 chr1 180601380 . T . PASS END=180601392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:30,0 chr1 180601393 . A . PASS END=180601393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:26,0 chr1 180601394 . C . PASS END=180601394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 180601395 . A . PASS END=180601395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 180601396 . T . PASS END=180601397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 180601398 . C . PASS END=180601402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 180601403 . T . PASS END=180601403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:21,0 chr1 180601404 . G . PASS END=180601406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:23,0 chr1 180651496 . G . PASS END=180651547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,182,255:40,0 chr1 180756889 . T . PASS END=180756958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:48:0,120,1800:0,128,255:40,0 chr1 180756959 . A . PASS END=180756990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,165,255:40,0 chr1 180772524 . A . PASS END=180772537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 180772538 . G . PASS END=180772554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:26,0 chr1 180772555 . T . PASS END=180772561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1088:0,84,255:30,0 chr1 180772562 . C . PASS END=180772562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 180772563 . A . PASS END=180772565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 180772566 . A . PASS END=180772566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 180772567 . T . PASS END=180772567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 180772568 . G . PASS END=180772568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 180772569 . A . PASS END=180772581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1103:0,83,255:35,0 chr1 180772582 . A . PASS END=180772582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1279:0,64,255:34,0 chr1 180772583 . C . PASS END=180772709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1211:0,91,255:39,0 chr1 180772710 . A . PASS END=180772729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:25:0,60,900:0,75,255:26,0 chr1 180772730 . C . PASS END=180772747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:18:0,43,654:0,43,255:20,0 chr1 180775198 . A . PASS END=180775331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:29:0,87,1049:0,87,255:40,0 chr1 180775332 . T . PASS END=180775332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:31,0 chr1 180775333 . A . PASS END=180775346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:32,0 chr1 180775347 . G . PASS END=180775347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 180775610 . G . PASS END=180775693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,102,1530:0,105,255:40,0 chr1 180780543 . C . PASS END=180780624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:49:0,120,1800:0,120,255:40,0 chr1 180793889 . C . PASS END=180793891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:30,0 chr1 180793892 . T . PASS END=180793892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 180793893 . A . PASS END=180794079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:82:33:0,82,1085:0,82,255:40,0 chr1 180794301 . A . PASS END=180794480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:31:0,90,1180:0,93,255:40,0 chr1 180804010 . T . PASS END=180804017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr1 180804018 . A . PASS END=180804024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,925:0,69,255:25,0 chr1 180804025 . G . PASS END=180804045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1011:0,84,255:34,0 chr1 180804046 . T . PASS END=180804046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:33,0 chr1 180804047 . T . PASS END=180804080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:36,0 chr1 180804081 . C . PASS END=180804082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 180804083 . T . PASS END=180804083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:26,0 chr1 180804084 . G . PASS END=180804085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 180804086 . C . PASS END=180804094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1172:0,83,255:30,0 chr1 180804095 . T . PASS END=180804095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 180804096 . G . PASS END=180804115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:30,0 chr1 180804116 . T . PASS END=180804116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 180804117 . C . PASS END=180804128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 180804129 . T . PASS END=180804129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,887:0,70,255:27,0 chr1 180804130 . T . PASS END=180804135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 180804136 . C . PASS END=180804136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 180804137 . T . PASS END=180804141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,944:0,84,255:28,0 chr1 180804142 . T . PASS END=180804142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 180804143 . G . PASS END=180804150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 180804151 . A . PASS END=180804151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:25,0 chr1 180804152 . G . PASS END=180804154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 180804155 . A . PASS END=180804174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:26,0 chr1 180804175 . T . PASS END=180804175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 180804176 . C . PASS END=180804177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 180804178 . G . PASS END=180804181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 180805658 . A . PASS END=180805662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 180805663 . G . PASS END=180805675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 180805676 . A . PASS END=180805676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 180805677 . A . PASS END=180805678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr1 180805679 . A . PASS END=180805679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 180805680 . T . PASS END=180805682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:21,0 chr1 180805683 . A . PASS END=180805685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 180805686 . T . PASS END=180805687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 180805688 . G . PASS END=180805694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,789:0,61,255:26,0 chr1 180805695 . G . PASS END=180805700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 180805701 . T . PASS END=180805701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 180805702 . G . PASS END=180805724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1271:0,89,255:37,0 chr1 180805725 . T . PASS END=180805725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:34,0 chr1 180805726 . C . PASS END=180805827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:36:0,81,1305:0,81,255:40,0 chr1 180805828 . G . PASS END=180805830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 180805831 . G . PASS END=180805832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:29,0 chr1 180805833 . C . PASS END=180805843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:29:0,69,1035:0,87,255:24,0 chr1 180805844 . C . PASS END=180805844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:23,0 chr1 180805845 . T . PASS END=180805845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:23,0 chr1 180805846 . C . PASS END=180805846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 180805847 . A . PASS END=180805849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 180805850 . A . PASS END=180805856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:24:0,45,675:0,72,255:16,0 chr1 180805857 . T . PASS END=180805863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:32:16:0,32,540:0,32,255:13,0 chr1 180832844 . A . PASS END=180832852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:24,0 chr1 180832853 . A . PASS END=180832853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 180832854 . C . PASS END=180832861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1057:0,84,255:29,0 chr1 180832862 . C . PASS END=180832862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 180832863 . T . PASS END=180832863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 180832864 . A . PASS END=180832864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:29,0 chr1 180832865 . T . PASS END=180832872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:35,0 chr1 180832873 . T . PASS END=180832873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:33,0 chr1 180832874 . T . PASS END=180832890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:98:35:0,98,1244:0,98,255:38,0 chr1 180832891 . T . PASS END=180832891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:37,0 chr1 180832892 . T . PASS END=180832983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:36:0,83,1139:0,83,255:40,0 chr1 180832984 . C . PASS END=180832984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:30,0 chr1 180832985 . G . PASS END=180832993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,92,255:31,0 chr1 180832994 . T . PASS END=180833010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:25,0 chr1 180842939 . G . PASS END=180842941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 180842942 . T . PASS END=180843076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1215:0,93,255:40,0 chr1 180843077 . C . PASS END=180843078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 180849212 . G . PASS END=180849431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,956:0,84,255:40,0 chr1 180849432 . C . PASS END=180849433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:25,0 chr1 180853140 . A . PASS END=180853140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 180853142 . A . PASS END=180853202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,154,255:40,0 chr1 180882380 . A . PASS END=180882380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,529:0,48,255:16,0 chr1 180882381 . T . PASS END=180882381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 180882382 . G . PASS END=180882392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:18,0 chr1 180882393 . A . PASS END=180882393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 180882394 . G . PASS END=180882429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:19,0 chr1 180885290 . A . PASS END=180885290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:10,0 chr1 180885291 . G . PASS END=180885297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 180885298 . A . PASS END=180885300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:20:12:0,20,410:0,20,255:12,0 chr1 180885301 . C . PASS END=180885313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 180885314 . A . PASS END=180885338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:17,0 chr1 180885339 . G . PASS END=180885339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:16,0 chr1 180885340 . C . PASS END=180885354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,613:0,41,255:18,0 chr1 180885355 . G . PASS END=180885362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180885363 . C . PASS END=180885374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 180885375 . A . PASS END=180885375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr1 180885376 . A . PASS END=180885392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 180885393 . C . PASS END=180885396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 180885397 . G . PASS END=180885397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 180885398 . G . PASS END=180885429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,521:0,45,255:16,0 chr1 180885430 . T C, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,10,0:0,7,0:48:136,51,0,639,51,639:255,51,0:0,0:9.8158e+01,4.8158e+01,6.6269e-05,4.5000e+02,8.2928e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,9:0,0,7,10 chr1 180885431 . G . PASS END=180885432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 180885433 . T . PASS END=180885433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 180885434 . G . PASS END=180885451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:43:16:0,43,598:0,43,255:19,0 chr1 180885452 . G . PASS END=180885454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 180885455 . A . PASS END=180885455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,723:0,39,255:20,0 chr1 180885456 . T . PASS END=180885467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,909:0,72,255:26,0 chr1 180885468 . C . PASS END=180885484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,889:0,64,255:26,0 chr1 180885485 . G . PASS END=180885488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 180885489 . G . PASS END=180885489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 180885490 . A . PASS END=180885491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 180885492 . T . PASS END=180885492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 180885493 . C . PASS END=180885494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1027:0,87,255:29,0 chr1 180885495 . A . PASS END=180885495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:26,0 chr1 180885496 . A . PASS END=180885497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180885498 . G . PASS END=180885508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1015:0,71,255:29,0 chr1 180885509 . G . PASS END=180885509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 180885510 . A . PASS END=180885511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 180885512 . G . PASS END=180885515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1101:0,80,255:31,0 chr1 180885516 . A . PASS END=180885516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1040:0,79,255:30,0 chr1 180885517 . A . PASS END=180885518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:31,0 chr1 180885519 . A . PASS END=180885519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,942:0,62,255:29,0 chr1 180885520 . T . PASS END=180885520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 180885521 . G . PASS END=180885521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1063:0,49,255:29,0 chr1 180885522 . A . PASS END=180885522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 180885523 . C . PASS END=180885525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1127:0,93,255:31,0 chr1 180885526 . T . PASS END=180885526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 180885527 . G . PASS END=180885527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 180885528 . G . PASS END=180885528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 180885529 . C . PASS END=180885532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 180885533 . A . PASS END=180885533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:28,0 chr1 180885534 . C . PASS END=180885546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:33,0 chr1 180885547 . C . PASS END=180885547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 180885548 . C . PASS END=180885652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,81,255:39,0 chr1 180885653 . T . PASS END=180885694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,914:0,62,255:26,0 chr1 180885695 . G . PASS END=180885695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 180885696 . G . PASS END=180885699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 180885700 . G . PASS END=180885700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 180885701 . C . PASS END=180885712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr1 180885713 . G . PASS END=180885713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 180885714 . G . PASS END=180885724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 180885725 . C . PASS END=180885741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 180885742 . G . PASS END=180885742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:15,0 chr1 180885743 . G . PASS END=180885747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,643:0,40,255:16,0 chr1 180885748 . C . PASS END=180885748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 180885749 . C . PASS END=180885757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 180885758 . T . PASS END=180885758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 180885759 . G . PASS END=180885764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr1 180885765 . G . PASS END=180885765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 180885766 . G . PASS END=180885829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,620:0,48,255:19,0 chr1 180885830 . T . PASS END=180885849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr1 180885850 . G . PASS END=180885850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr1 180885851 . G . PASS END=180885858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 180885859 . C . PASS END=180885859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 180885860 . T . PASS END=180885860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 180885861 . T . PASS END=180885876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1125:0,87,255:31,0 chr1 180885877 . T . PASS END=180885877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 180885878 . C . PASS END=180885932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1163:0,80,255:33,0 chr1 180885933 . C . PASS END=180885933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 180885934 . A . PASS END=180885966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1172:0,86,255:34,0 chr1 180885967 . C . PASS END=180885968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:28:0,78,1170:0,84,255:26,0 chr1 180885969 . T . PASS END=180885969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180885970 . T . PASS END=180885970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:27,0 chr1 180885971 . T . PASS END=180885976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180885977 . T . PASS END=180885978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 180885979 . G . PASS END=180885979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 180885980 . C . PASS END=180885980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr1 180885981 . G . PASS END=180885988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 180885989 . A . PASS END=180885989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 180885990 . G . PASS END=180885990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr1 180885991 . A . PASS END=180886005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:28:0,66,990:0,68,255:26,0 chr1 180886006 . G . PASS END=180886007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 180886008 . A . PASS END=180886028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 180886029 . G . PASS END=180886029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 180886030 . T . PASS END=180886030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,716:0,64,255:26,0 chr1 180886031 . C . PASS END=180886035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 180886036 . T . PASS END=180886036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 180886037 . C . PASS END=180886051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 180886052 . G . PASS END=180886052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 180886053 . C . PASS END=180886104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1118:0,90,255:37,0 chr1 180886105 . G . PASS END=180886105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:30,1 chr1 180886106 . T . PASS END=180886106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:38:0,80,1369:0,80,255:30,1 chr1 180886107 . G . PASS END=180886107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:31,0 chr1 180886108 . T . PASS END=180886214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:37,0 chr1 180886215 . T . PASS END=180886233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:26,0 chr1 180886234 . C . PASS END=180886234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 180886235 . A . PASS END=180886236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180886987 . A . PASS END=180887000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,854:0,72,255:26,0 chr1 180887001 . G . PASS END=180887001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 180887002 . A . PASS END=180887002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 180887003 . T . PASS END=180887007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 180887008 . A . PASS END=180887008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 180887009 . C . PASS END=180887042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1163:0,84,255:32,0 chr1 180887043 . C . PASS END=180887050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:23,0 chr1 180897566 . G . PASS END=180897568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:17,0 chr1 180897569 . C T, 49.82 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=2.550;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:3,3,0:6,5,0:48:85,0,50,255,322,577:237,0,255:9,0:4.9819e+01,6.7045e-05,5.3000e+01,2.5489e+02,3.5658e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,6,2:6,3,5,3 chr1 180897570 . G . PASS END=180897581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:22,0 chr1 180897582 . C . PASS END=180897590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr1 180897591 . G . PASS END=180897606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,994:0,80,255:32,0 chr1 180897607 . A . PASS END=180897607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 180897608 . T . PASS END=180897608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 180897609 . G . PASS END=180897614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1200:0,83,255:32,0 chr1 180897615 . G . PASS END=180897615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr1 180897616 . C . PASS END=180897702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:31:0,85,1166:0,85,255:39,0 chr1 180897703 . G . PASS END=180897705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:29,0 chr1 180897706 . G . PASS END=180897706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 180897707 . C . PASS END=180897708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 180897709 . G . PASS END=180897709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 180904251 . A . PASS END=180904259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,876:0,61,255:26,0 chr1 180904260 . C . PASS END=180904260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180904261 . A . PASS END=180904261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 180904262 . G . PASS END=180904263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180904264 . A . PASS END=180904264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 180904265 . G . PASS END=180904343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:40,0 chr1 180904344 . A . PASS END=180904393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,890:0,69,255:25,0 chr1 180904394 . T . PASS END=180904394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 180904395 . G . PASS END=180904402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,732:0,66,255:22,0 chr1 180904403 . A . PASS END=180904420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,50,255:19,0 chr1 180904421 . A . PASS END=180904424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 180904425 . C . PASS END=180904431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 180904432 . C . PASS END=180904432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 180904433 . G . PASS END=180904436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 180904437 . C . PASS END=180904451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 180904452 . G . PASS END=180904462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 180904463 . G . PASS END=180904465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 180904466 . A . PASS END=180904467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 180904468 . G . PASS END=180904475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 180904476 . C . PASS END=180904476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr1 180904477 . A . PASS END=180904528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,839:0,66,255:24,0 chr1 180904529 . C . PASS END=180904530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 180904531 . G . PASS END=180904531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 180904532 . A . PASS END=180904532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 180904533 . C . PASS END=180904533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 180904534 . T . PASS END=180904534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 180904535 . A . PASS END=180904538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 180904539 . C . PASS END=180904539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 180904540 . A . PASS END=180904543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:23,0 chr1 180904544 . G . PASS END=180904544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 180904545 . G . PASS END=180904545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 180904546 . G . PASS END=180904546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 180904547 . C . PASS END=180904553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 180904554 . G . PASS END=180904554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 180904555 . C . PASS END=180904567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:21,0 chr1 180904568 . G . PASS END=180904607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 180904608 . C . PASS END=180904618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,37,255:14,0 chr1 180904619 . C . PASS END=180904619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:12,0 chr1 180904620 . G . PASS END=180904622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 180904623 . A . PASS END=180904623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 180904624 . C . PASS END=180904624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,457:0,1,255:12,0 chr1 180904625 . C . PASS END=180904625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 180904626 . G . PASS END=180904626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 180904627 . C . PASS END=180904628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 180904629 . G . PASS END=180904636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr1 180904637 . G . PASS END=180904637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 180904638 . C . PASS END=180904642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,645:0,43,255:19,0 chr1 180904643 . A . PASS END=180904645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180904646 . G . PASS END=180904647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 180904648 . A . PASS END=180904648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 180904649 . G . PASS END=180904652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,737:0,47,255:21,0 chr1 180904653 . C . PASS END=180904653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 180904654 . C . PASS END=180904654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:21,0 chr1 180904655 . A . PASS END=180904655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 180904656 . G . PASS END=180904660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 180904661 . G . PASS END=180904661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 180904662 . C . PASS END=180904664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 180904665 . C . PASS END=180904665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:17,0 chr1 180904666 . A . PASS END=180904677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,659:0,41,255:19,0 chr1 180904678 . G . PASS END=180904678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr1 180904679 . A . PASS END=180904679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 180904680 . C . PASS END=180904680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,557:0,7,255:15,0 chr1 180904681 . C . PASS END=180904681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr1 180904682 . C . PASS END=180904682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 180904683 . G . PASS END=180904684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:17,0 chr1 180904685 . G . PASS END=180904685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 180904686 . C . PASS END=180904686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:17,0 chr1 180904687 . C . PASS END=180904689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 180904690 . G . PASS END=180904690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 180904691 . C . PASS END=180904691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 180904692 . C . PASS END=180904692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 180904693 . C . PASS END=180904700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:19,0 chr1 180904701 . G . PASS END=180904701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,596:0,10,255:17,0 chr1 180904702 . G . PASS END=180904702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 180904703 . C . PASS END=180904703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr1 180904704 . G . PASS END=180904704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr1 180904705 . C . PASS END=180904705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:18,0 chr1 180904706 . C . PASS END=180904706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr1 180904707 . C . PASS END=180904707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:18,0 chr1 180904708 . C . PASS END=180904708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:17,0 chr1 180904709 . C . PASS END=180904715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,643:0,40,255:17,0 chr1 180904716 . C . PASS END=180904716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:16,0 chr1 180904717 . A . PASS END=180904730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,554:0,40,255:17,0 chr1 180904731 . G . PASS END=180904731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 180904732 . C . PASS END=180904734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr1 180904735 . C . PASS END=180904735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 180904736 . A . PASS END=180904799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,615:0,40,255:19,0 chr1 180904800 . A . PASS END=180904800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr1 180904801 . G . PASS END=180904803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,684:0,44,255:19,0 chr1 180904804 . C . PASS END=180904805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 180904806 . C . PASS END=180904818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 180904819 . G . PASS END=180904821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 180904822 . T . PASS END=180904822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 180904823 . G . PASS END=180904823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr1 180904824 . G . PASS END=180904828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 180904829 . G . PASS END=180904829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 180904830 . G . PASS END=180904832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 180904833 . A . PASS END=180904833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 180904834 . A . PASS END=180904849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,892:0,66,255:25,0 chr1 180904850 . C . PASS END=180904852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 180904853 . T . PASS END=180904865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,1008:0,78,255:26,0 chr1 180904866 . G . PASS END=180904872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 180904873 . T . PASS END=180904875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 180904876 . G . PASS END=180904894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:33,0 chr1 180904895 . A . PASS END=180904895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:31,0 chr1 180904896 . C . PASS END=180904935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1169:0,80,255:34,0 chr1 180904936 . T . PASS END=180904936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:25,0 chr1 180904937 . C . PASS END=180904938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 180904939 . C . PASS END=180904939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:27,0 chr1 180904940 . A . PASS END=180904972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1057:0,84,255:30,0 chr1 180904973 . G . PASS END=180904973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 180904974 . C . PASS END=180904984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 180904985 . T . PASS END=180904985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 180904986 . G . PASS END=180905012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1117:0,84,255:30,0 chr1 180905013 . C . PASS END=180905023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,71,255:25,0 chr1 180905024 . C . PASS END=180905024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:22,0 chr1 180905025 . C . PASS END=180905038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,71,255:23,0 chr1 180905039 . C . PASS END=180905039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,742:0,55,255:22,0 chr1 180905040 . G . PASS END=180905047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 180905048 . C . PASS END=180905048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 180905049 . T . PASS END=180905057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 180905058 . T . PASS END=180905071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,696:0,44,255:19,0 chr1 180905072 . A . PASS END=180905072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180905073 . C . PASS END=180905086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,666:0,44,255:18,0 chr1 180905087 . A . PASS END=180905087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180905088 . T . PASS END=180905089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 180905090 . A . PASS END=180905090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180905091 . T . PASS END=180905091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 180905092 . G . PASS END=180905092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180905093 . T . PASS END=180905093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 180905094 . G . PASS END=180905095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 180905096 . A . PASS END=180905096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:20,0 chr1 180905097 . G . PASS END=180905099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 180905100 . G . PASS END=180905100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 180905101 . G . PASS END=180905102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 180905103 . A . PASS END=180905103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 180905104 . A . PASS END=180905105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 180905106 . T . PASS END=180905106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:19,0 chr1 180905107 . G . PASS END=180905109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 180905110 . G . PASS END=180905110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,725:0,38,255:20,0 chr1 180905111 . T . PASS END=180905112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 180905113 . A . PASS END=180905115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 180905116 . G . PASS END=180905116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr1 180905117 . A . PASS END=180905117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 180905118 . G . PASS END=180905118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:20,0 chr1 180905119 . G . PASS END=180905120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:15:21:0,15,554:0,15,255:19,0 chr1 180905121 . C . PASS END=180905122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 180905123 . G . PASS END=180905123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr1 180905124 . A . PASS END=180905124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 180905125 . G . PASS END=180905125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 180905126 . G . PASS END=180905126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 180905127 . A . PASS END=180905127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 180905128 . C . PASS END=180905139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 180905140 . G . PASS END=180905141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 180905142 . A . PASS END=180905148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr1 180905149 . T . PASS END=180905150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr1 180905151 . T . PASS END=180905161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,856:0,72,255:24,0 chr1 180905162 . A . PASS END=180905162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 180905163 . T . PASS END=180905165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 180905166 . C . PASS END=180905166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 180905167 . A . PASS END=180905171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr1 180905172 . T . PASS END=180905172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr1 180905173 . C . PASS END=180905180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,886:0,61,255:24,0 chr1 180905181 . G . PASS END=180905181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 180905182 . G . PASS END=180905183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 180905184 . G . PASS END=180905184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr1 180905185 . T . PASS END=180905187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 180905188 . A . PASS END=180905204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:20,0 chr1 180905205 . A . PASS END=180905205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:17,0 chr1 180905206 . C . PASS END=180905209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:18,0 chr1 180905210 . A . PASS END=180905210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 180905211 . G . PASS END=180905246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,651:0,51,255:18,0 chr1 180905247 . T . PASS END=180905247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 180905248 . C . PASS END=180905270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,674:0,51,255:18,0 chr1 180905271 . A . PASS END=180905273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 180905274 . C . PASS END=180905280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr1 180905281 . G . PASS END=180905286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 180905287 . G . PASS END=180905287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 180905288 . C . PASS END=180905300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 180905301 . C . PASS END=180905301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 180905302 . A . PASS END=180905314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 180905315 . C . PASS END=180905327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 180905328 . A . PASS END=180905328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 180905329 . G . PASS END=180905330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 180905331 . C . PASS END=180905331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 180905332 . C . PASS END=180905349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:24,0 chr1 180905350 . A . PASS END=180905350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 180905351 . G . PASS END=180905351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 180905352 . C T, 40.67 PASS DP=24;MQ=250.00;MQRankSum=3.747;ReadPosRankSum=0.508;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,7,0:0.292,0.000:24:7,4,0:10,3,0:40:75,0,50,250,608,859:199,0,255:17,0:4.0672e+01,3.9374e-04,5.3000e+01,2.5039e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,4,3:8,9,3,4 chr1 180905353 . C . PASS END=180905369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 180905370 . T . PASS END=180905370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 180905371 . G . PASS END=180905377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:23,0 chr1 180905378 . C . PASS END=180905378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 180905379 . T . PASS END=180905389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 180905390 . A . PASS END=180905390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 180905391 . A . PASS END=180905393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:15,0 chr1 180905394 . G . PASS END=180905394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:15,0 chr1 180905395 . A . PASS END=180905405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:22:0,48,720:0,56,255:18,0 chr1 180905406 . G . PASS END=180905406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,676:0,11,255:16,0 chr1 180905407 . C . PASS END=180905410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:53:19:0,53,654:0,53,255:19,0 chr1 180905411 . C . PASS END=180905411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 180905412 . T . PASS END=180905412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 180905413 . G . PASS END=180905414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 180905415 . C . PASS END=180905415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 180905416 . C . PASS END=180905426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 180905427 . C . PASS END=180905430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:20,0 chr1 180905431 . C . PASS END=180905433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180905434 . C . PASS END=180905434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 180905435 . C . PASS END=180905438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180905439 . A . PASS END=180905440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 180905441 . C . PASS END=180905441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180905442 . T . PASS END=180905447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 180905448 . G T, 38.95 PASS DP=22;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=3.788;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,8,0:0.364,0.000:22:6,6,0:8,2,0:39:74,0,50,286,499,785:244,0,255:11,0:3.8953e+01,5.7445e-04,5.3001e+01,2.8605e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,7,1:6,8,5,3 chr1 180905449 . T . PASS END=180905450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 180905451 . T . PASS END=180905455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 180905456 . A . PASS END=180905456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 180905457 . A . PASS END=180905463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180905464 . G . PASS END=180905464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 180905465 . C . PASS END=180905465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 180905466 . G . PASS END=180905466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 180905467 . C . PASS END=180905478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 180905479 . C . PASS END=180905485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,623:0,43,255:19,0 chr1 180905486 . G . PASS END=180905490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 180905491 . A . PASS END=180905491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 180905492 . C . PASS END=180905512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 180905513 . G . PASS END=180905513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 180905514 . G . PASS END=180905515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 180905516 . A . PASS END=180905516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 180905517 . G . PASS END=180905518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 180905519 . C . PASS END=180905520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 180905521 . G . PASS END=180905553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,878:0,66,255:24,0 chr1 180905554 . A . PASS END=180905554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr1 180905555 . C . PASS END=180905558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 180905559 . G . PASS END=180905559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 180905560 . C . PASS END=180905578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr1 180905579 . C . PASS END=180905625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr1 180905626 . C . PASS END=180905626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 180905627 . A . PASS END=180905628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180905629 . A . PASS END=180905656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,984:0,65,255:26,0 chr1 180905657 . A . PASS END=180905662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,56,255:22,0 chr1 180905663 . T . PASS END=180905673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,739:0,63,255:21,0 chr1 180905674 . T . PASS END=180905680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 180905681 . A . PASS END=180905681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:17,0 chr1 180905682 . C . PASS END=180905683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 180905684 . A . PASS END=180905698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr1 180905699 . C . PASS END=180905709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr1 180905710 . C . PASS END=180905716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 180905717 . A . PASS END=180905717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 180905718 . G . PASS END=180905718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180905719 . C . PASS END=180905778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 180905779 . G . PASS END=180905779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 180905780 . A . PASS END=180905781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 180905782 . C . PASS END=180905782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 180905783 . C . PASS END=180905788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:16,0 chr1 180905789 . T . PASS END=180905789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 180905790 . G . PASS END=180905801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 180905802 . A . PASS END=180905804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 180905805 . T . PASS END=180905806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr1 180907691 . G . PASS END=180907691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 180907692 . A . PASS END=180907721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 180907722 . T . PASS END=180907736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr1 180907737 . C . PASS END=180907753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:21,0 chr1 180907754 . T . PASS END=180907755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 180907756 . T . PASS END=180907759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 180907760 . T . PASS END=180907761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 180907762 . T . PASS END=180907763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 180907764 . C . PASS END=180907765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 180907766 . C . PASS END=180907769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 180907770 . G . PASS END=180907770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 180907771 . G . PASS END=180907802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr1 180907803 . C . PASS END=180907805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 180907806 . G . PASS END=180907806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 180907807 . C . PASS END=180907834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:19,0 chr1 180907835 . A . PASS END=180907835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 180907836 . T . PASS END=180907839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 180907840 . C . PASS END=180907847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,540:0,32,255:13,0 chr1 180910181 . A . PASS END=180910181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr1 180910182 . G . LowGQ END=180910182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,229:17,0,245:8,0 chr1 180910183 . C . PASS END=180910183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 180910184 . A . PASS END=180910184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 180910185 . T . LowGQ END=180910186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,250:0,0,255:10,0 chr1 180910187 . A . PASS END=180910187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 180910188 . G . LowGQ END=180910188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,302:25,0,255:10,0 chr1 180910189 . C . PASS END=180910189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 180910190 . A . PASS END=180910190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 180910191 . G . LowGQ END=180910191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,316:33,0,255:10,0 chr1 180910192 . G . PASS END=180910192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 180910193 . A . PASS END=180910193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,399:0,39,255:13,0 chr1 180910194 . G . PASS END=180910194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,371:0,6,255:11,0 chr1 180910195 . C . PASS END=180910195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 180910196 . T . PASS END=180910197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:11,0 chr1 180910198 . G . PASS END=180910199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 180910200 . A . PASS END=180910200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 180910201 . C . PASS END=180910202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 180910203 . G . LowGQ END=180910204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:13:0,0,379:0,0,255:13,0 chr1 180910205 . A . PASS END=180910206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 180910207 . C . PASS END=180910207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 180910208 . C . PASS END=180910208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 180910209 . G . LowGQ END=180910209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:27,0,255:12,0 chr1 180910210 . G . PASS END=180910210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 180910211 . C . PASS END=180910211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 180910212 . T . PASS END=180910212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 180910213 . C . PASS END=180910213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 180910214 . C . PASS END=180910217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 180910218 . T . LowGQ END=180910219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,466:0,0,255:15,0 chr1 180910220 . G . PASS END=180910220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:16,0 chr1 180910221 . G . PASS END=180910222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 180910223 . T . LowGQ END=180910224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:0,0,255:15,0 chr1 180910225 . C . PASS END=180910228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 180910229 . T . PASS END=180910229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:9:19:0,9,507:0,9,255:17,0 chr1 180910230 . T . PASS END=180910231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:18,0 chr1 180910232 . G . LowGQ END=180910232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,551:20,0,255:17,0 chr1 180910233 . G . PASS END=180910234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,627:0,40,255:18,0 chr1 180910235 . C . PASS END=180910235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr1 180910236 . C . PASS END=180910238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,684:0,47,255:20,0 chr1 180910239 . A . PASS END=180910240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 180910241 . C . PASS END=180910241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 180910242 . A . PASS END=180910243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180910244 . G . PASS END=180910244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 180910245 . A . PASS END=180910246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180910247 . A . PASS END=180910247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 180910248 . A . PASS END=180910248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 180910249 . G . PASS END=180910249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 180910250 . G . PASS END=180910250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180910251 . A . PASS END=180910251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 180910252 . G . PASS END=180910254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 180910255 . G . PASS END=180910255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 180910256 . C . PASS END=180910257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 180910258 . G . PASS END=180910259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 180910260 . A . PASS END=180910260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 180910261 . T . PASS END=180910261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr1 180910262 . A . PASS END=180910262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 180910263 . G . PASS END=180910263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,821:0,33,255:22,0 chr1 180910264 . C . PASS END=180910265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 180910266 . T . PASS END=180910266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 180910267 . C . PASS END=180910272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 180910273 . T . PASS END=180910273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 180910274 . G . PASS END=180910363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,62,255:24,0 chr1 180910364 . C . PASS END=180910384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 180910385 . A . PASS END=180910391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr1 180910392 . A . PASS END=180910393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 180910394 . G . PASS END=180910397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:10,0 chr1 180910398 . C . PASS END=180910403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 180910404 . T . PASS END=180910412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:10,0 chr1 180910413 . C . PASS END=180910421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 180913525 . G . PASS END=180913559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:35:0,100,1358:0,100,255:40,0 chr1 180913560 . T . PASS END=180913596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:47:0,113,1800:0,113,255:40,0 chr1 180913597 . A G, 218.54 PASS DP=58;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,26,0:0,31,0:169:256,172,0,2185,172,2185:255,171,0:0,0:2.1854e+02,1.6854e+02,0.0000e+00,4.5000e+02,2.0331e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,29:0,0,33,24 chr1 180913598 . A . PASS END=180913634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,134,255:40,0 chr1 180913635 . C . PASS END=180913652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,105,1575:0,117,255:40,0 chr1 180914439 . G . PASS END=180914468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 180914469 . C . PASS END=180914469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 180914470 . A . PASS END=180914477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 180914478 . G . PASS END=180914486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 180914487 . T . PASS END=180914487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 180914488 . G . PASS END=180914528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr1 180914529 . G . PASS END=180914531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 180914532 . C . PASS END=180914550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 180914551 . C . PASS END=180914557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 180914558 . T . PASS END=180914558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 180914559 . G . PASS END=180914559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 180914560 . C . PASS END=180914561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 180914562 . G . PASS END=180914565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 180914566 . T . PASS END=180914566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 180914567 . C . PASS END=180914583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,570:0,51,255:17,0 chr1 180914584 . G . PASS END=180914584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 180914585 . G . PASS END=180914602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 180914603 . G . PASS END=180914603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 180914604 . G . PASS END=180914617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 180914618 . A . PASS END=180914623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 180914624 . G . PASS END=180914624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr1 180914625 . T . PASS END=180914625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 180914626 . A . PASS END=180914628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 180914629 . C . PASS END=180914631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 180914632 . T . PASS END=180914632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 180914633 . C . PASS END=180914635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 180914636 . C . PASS END=180914636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 180914637 . T . PASS END=180914637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 180914638 . C . PASS END=180914643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 180914644 . C . PASS END=180914667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr1 180914668 . A . PASS END=180914675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 180914676 . A . PASS END=180914688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 180914689 . T . PASS END=180914724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 180919476 . G . PASS END=180919494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:19,0 chr1 180919495 . G . PASS END=180919506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 180919507 . C . PASS END=180919507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 180919508 . A . PASS END=180919521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,853:0,66,255:26,0 chr1 180919522 . C . PASS END=180919524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 180919525 . A . PASS END=180919577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,902:0,72,255:26,0 chr1 180919578 . C . PASS END=180919578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 180919579 . A . PASS END=180919608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 180919609 . C . PASS END=180919609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr1 180919610 . C . PASS END=180919623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 180919624 . G . PASS END=180919626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 180919627 . C . PASS END=180919627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 180919628 . T . PASS END=180919658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr1 180919659 . T . PASS END=180919663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 180919664 . C . PASS END=180919669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 180919930 . T . PASS END=180919935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,880:0,64,255:27,0 chr1 180919936 . T . PASS END=180919937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 180919938 . T . PASS END=180919938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 180919939 . A . PASS END=180919946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:32,0 chr1 180919947 . C . PASS END=180919947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:32,0 chr1 180919948 . T . PASS END=180919951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1138:0,89,255:35,0 chr1 180919952 . T . PASS END=180919952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,985:0,49,255:33,0 chr1 180919953 . T . PASS END=180919953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1217:0,108,255:36,0 chr1 180919954 . G . PASS END=180919954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr1 180919955 . G . PASS END=180919960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,100,1299:0,100,255:39,0 chr1 180919961 . G . PASS END=180919961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1330:0,68,255:36,0 chr1 180919962 . G . PASS END=180919988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,114,1458:0,116,255:40,0 chr1 180919989 . G . PASS END=180920025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:39:0,96,1440:0,101,255:40,0 chr1 180920026 . T C, 45.45 PASS DP=39;MQ=250.00;MQRankSum=5.182;ReadPosRankSum=2.757;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,15,0:0.385,0.000:39:14,8,0:10,7,0:45:80,0,50,537,858,1395:255,0,255:20,0:4.5448e+01,1.4574e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,5,10:10,14,8,7 chr1 180920027 . G . PASS END=180920040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:34,0 chr1 180920041 . T . PASS END=180920049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:30:0,60,900:0,90,255:24,0 chr1 180920050 . C . PASS END=180920054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:24:0,57,855:0,72,255:19,0 chr1 180945706 . T . PASS END=180945782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:36:0,96,1297:0,98,255:40,0 chr1 180953813 . C . PASS END=180953815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 180953816 . T . PASS END=180953852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,128,255:40,0 chr1 180953853 . A G, 47.24 PASS DP=51;MQ=249.05;MQRankSum=5.445;ReadPosRankSum=6.019;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,21,0:0.412,0.000:51:16,13,0:14,8,0:46:82,0,50,722,1036,1758:255,0,255:30,0:4.7242e+01,1.0380e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,11,10:16,14,9,12 chr1 180953854 . T . PASS END=180953890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:94:44:0,94,1560:0,94,255:40,0 chr1 180953891 . A . PASS END=180953907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:39:0,99,1451:0,112,255:40,0 chr1 180957375 . A . PASS END=180957390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:25,0 chr1 180957391 . G . PASS END=180957419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1041:0,83,255:34,0 chr1 180957420 . T . PASS END=180957420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 180957421 . T . PASS END=180957432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1274:0,102,255:34,0 chr1 180957433 . T . PASS END=180957433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:31,0 chr1 180957434 . G . PASS END=180957452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1148:0,83,255:32,0 chr1 180957453 . A . PASS END=180957453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 180957454 . A . PASS END=180957454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,926:0,56,255:22,0 chr1 180957455 . C . PASS END=180957481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:23,0 chr1 180959120 . C . PASS END=180959126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 180959127 . T . PASS END=180959127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr1 180959128 . G . PASS END=180959161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:34:0,89,1243:0,89,255:36,0 chr1 180959162 . T . PASS END=180959162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1124:0,75,255:33,0 chr1 180959163 . C . PASS END=180959217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1196:0,81,255:38,0 chr1 180959218 . T . PASS END=180959218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 180959219 . C . PASS END=180959223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 180959224 . T . PASS END=180959239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,64,255:27,0 chr1 180959240 . C . PASS END=180959244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,62,255:19,0 chr1 180959245 . C . PASS END=180959245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 180962499 . C . PASS END=180962504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,185,255:40,0 chr1 180962505 . A G, 50.00 PASS DP=67;MQ=250.00;MQRankSum=7.029;ReadPosRankSum=3.116;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,34,0:0.507,0.000:67:19,17,0:14,17,0:48:85,0,50,1208,1143,2351:255,0,255:33,0:5.0000e+01,6.5233e-05,5.2977e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,18,22,12:13,20,19,15 chr1 180962506 . T . PASS END=180962542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:67:0,120,1800:0,191,255:40,0 chr1 180962543 . A . PASS END=180962561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,218,255:40,0 chr1 180971742 . C . PASS END=180971836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,164,255:40,0 chr1 180974430 . T . PASS END=180974584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:31:0,80,1133:0,80,255:40,0 chr1 180974585 . G . PASS END=180974595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,77,255:21,0 chr1 180974596 . C . PASS END=180974598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:19,0 chr1 180974599 . T . PASS END=180974599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:18,0 chr1 180991775 . C . PASS END=180991809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,850:0,62,255:25,0 chr1 181003144 . A . PASS END=181003210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,108,1620:0,116,255:40,0 chr1 181018188 . G . PASS END=181018228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 181018229 . C . PASS END=181018262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr1 181018263 . G . PASS END=181018263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 181018264 . G . PASS END=181018264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 181018265 . T . PASS END=181018268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 181018269 . T . PASS END=181018279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 181018280 . C . PASS END=181018280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 181018281 . C . PASS END=181018352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr1 181018353 . C . PASS END=181018353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 181018354 . T . PASS END=181018364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 181018365 . A . PASS END=181018365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 181018366 . G . PASS END=181018400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 181018401 . T . PASS END=181018406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 181018407 . A . PASS END=181018407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,317:0,16,255:8,0 chr1 181018408 . G . PASS END=181018440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:9,0 chr1 181018441 . T . PASS END=181018446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 181018447 . A . PASS END=181018447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 181018448 . G . PASS END=181018448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 181019147 . G . PASS END=181019481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:30:0,84,1260:0,90,255:40,0 chr1 181021371 . A . PASS END=181021381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,799:0,66,255:27,0 chr1 181021382 . G . PASS END=181021406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,967:0,87,255:29,0 chr1 181021407 . T . PASS END=181021407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 181021408 . T . PASS END=181021408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 181021409 . C . PASS END=181021410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 181021411 . A . PASS END=181021455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1055:0,84,255:40,0 chr1 181021456 . A . PASS END=181021456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1369:0,74,255:37,0 chr1 181021457 . G . PASS END=181021560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,92,255:40,0 chr1 181021561 . A . PASS END=181021561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:27,0 chr1 181021562 . A . PASS END=181021583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1155:0,80,255:31,0 chr1 181021584 . G . PASS END=181021584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 181021585 . C . PASS END=181021586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 181021587 . A . PASS END=181021587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,961:0,40,255:25,0 chr1 181021588 . C . PASS END=181021591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 181021592 . T . PASS END=181021604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,67,255:26,0 chr1 181021605 . T . PASS END=181021625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,50,255:19,0 chr1 181021626 . T . PASS END=181021630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 181021631 . C . PASS END=181021634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 181021635 . A . PASS END=181021646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 181022709 . A . PASS END=181022709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 181022710 . A . PASS END=181022718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1202:0,83,255:35,0 chr1 181022719 . T . PASS END=181022719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1173:0,69,255:34,0 chr1 181022720 . A . PASS END=181022788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1168:0,84,255:40,0 chr1 181022789 . C . PASS END=181022802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,908:0,61,255:26,0 chr1 181022803 . A . PASS END=181022803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,732:0,44,255:22,0 chr1 181022804 . A . PASS END=181022813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:23,0 chr1 181024361 . A . PASS END=181024401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,180,255:40,0 chr1 181058039 . A . PASS END=181058039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,402:0,33,255:11,0 chr1 181058040 . T . PASS END=181058040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 181058041 . G . PASS END=181058048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr1 181058049 . A . PASS END=181058077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:18,0 chr1 181058078 . T . PASS END=181058087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr1 181058088 . A . PASS END=181058097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 181058098 . C . PASS END=181058098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 181058099 . T . PASS END=181058099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 181058100 . C . PASS END=181058102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 181058103 . G . PASS END=181058103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 181058104 . G . PASS END=181058113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 181058114 . G . PASS END=181058152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,660:0,43,255:19,0 chr1 181058153 . G . PASS END=181058157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 181058158 . G . PASS END=181058166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 181058167 . C . PASS END=181058167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:17,0 chr1 181058168 . C . PASS END=181058194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,668:0,51,255:18,0 chr1 181058195 . C . PASS END=181058199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 181058200 . C . PASS END=181058211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:12:0,24,360:0,36,255:8,0 chr1 181058212 . C . PASS END=181058238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr1 181058239 . A . PASS END=181058239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 181058240 . C . PASS END=181058275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr1 181058276 . C . PASS END=181058282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr1 181058283 . G . PASS END=181058287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:9,0 chr1 181058288 . G . PASS END=181058288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 181058289 . G . PASS END=181058290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 181058291 . G . PASS END=181058291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 181058292 . A . PASS END=181058292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:8,0 chr1 181058293 . G . PASS END=181058306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr1 181058307 . C . PASS END=181058312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 181058313 . G A, 50.00 PASS DP=11;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=1.749;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,6,0:0.545,0.000:11:2,2,0:3,4,0:48:85,0,50,215,179,393:177,0,161:5,0:5.0000e+01,6.6269e-05,5.2803e+01,2.1459e+02,2.1355e+02,3.9637e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,2,4:3,2,4,2 chr1 181058314 . T . PASS END=181058322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 181058323 . G . PASS END=181058350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,491:0,45,255:17,0 chr1 181058351 . T . PASS END=181058352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 181058353 . C . PASS END=181058353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 181058354 . T . PASS END=181058355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 181058356 . C . PASS END=181058356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 181058357 . G . PASS END=181058357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 181058358 . T . PASS END=181058358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 181058359 . C . PASS END=181058363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 181058364 . A . PASS END=181058364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 181058365 . C . PASS END=181058380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr1 181058381 . G . PASS END=181058381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 181058382 . A . PASS END=181058396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:17:0,44,629:0,44,255:19,0 chr1 181058397 . C . PASS END=181058397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 181058398 . C . PASS END=181058414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 181058415 . G . LowGQ END=181058415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,429:5,0,255:14,0 chr1 181058416 . G . PASS END=181058417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 181058418 . A . PASS END=181058418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 181058419 . C . PASS END=181058455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,531:0,48,255:17,0 chr1 181058456 . G . PASS END=181058456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 181058457 . C . PASS END=181058457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 181058458 . C . PASS END=181058466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,549:0,32,255:13,0 chr1 181058467 . C . PASS END=181058467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 181058468 . G . PASS END=181058468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 181058469 . T . PASS END=181058469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 181058470 . G . PASS END=181058471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,543:0,31,255:14,0 chr1 181058472 . A . PASS END=181058476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 181058477 . C . PASS END=181058477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:15,0 chr1 181058478 . C . PASS END=181058488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 181058489 . G . PASS END=181058534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:13,0 chr1 181058535 . C . PASS END=181058535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 181058536 . C . PASS END=181058540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 181058541 . T . PASS END=181058541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 181058542 . A . PASS END=181058557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:10,0 chr1 181058558 . C . PASS END=181058565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 181058566 . C . PASS END=181058567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 181058568 . G . PASS END=181058579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr1 181058580 . G . PASS END=181058580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 181058581 . C . PASS END=181058604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,166:6,0 chr1 181058605 . G . PASS END=181058605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,161:0,1,161:4,0 chr1 181058606 . G . PASS END=181058617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:5,0 chr1 181058618 . C G, 41.23 PASS DP=5;MQ=250.00;MQRankSum=1.231;ReadPosRankSum=0.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:2,3,0:0.600,0.000:5:0,2,0:2,1,0:41:76,0,50,99,72,171:85,0,62:2,0:4.1230e+01,3.5129e-04,5.2564e+01,9.9266e+01,1.0633e+02,1.7382e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,0,3:2,0,1,2:181058618 chr1 181058619 . G . PASS END=181058619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 181058620 . C . PASS END=181058642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:1:3:0,1,90:0,1,116:3,0 chr1 181058643 . A G, 57.00 PASS DP=3;MQ=247.36;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:7:94,9,0,116,9,116:116,9,0:0,0:5.6997e+01,6.9969e+00,9.6768e-01,1.1429e+02,4.1767e+01,1.1729e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,2:0,0,1,2:181058618 chr1 181058644 . A . PASS END=181058659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr1 181058660 . C . PASS END=181058680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 181058681 . T . PASS END=181058681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 181058682 . G . PASS END=181058686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 181058687 . A . PASS END=181058694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 181058695 . C . PASS END=181058696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 181058697 . G . PASS END=181058699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 181058700 . C . PASS END=181058702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 181058703 . C . PASS END=181058703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr1 181058704 . G . PASS END=181058704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 181058705 . G . PASS END=181058724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr1 181058725 . G . PASS END=181058741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:13,0 chr1 181058742 . G . PASS END=181058789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 181058790 . G . PASS END=181058790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 181058791 . T . PASS END=181058815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr1 181058816 . G . PASS END=181058834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 181058835 . T . PASS END=181058852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:21,0 chr1 181058853 . T . PASS END=181058853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 181058854 . C . PASS END=181058857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 181058858 . G . PASS END=181058858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 181058859 . G . PASS END=181058862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 181058863 . C . PASS END=181058881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 181058882 . C . PASS END=181058882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 181058883 . G . PASS END=181058883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 181058884 . G . PASS END=181058884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 181058885 . A . PASS END=181058885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 181058886 . A . PASS END=181058902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr1 181058903 . A . PASS END=181058903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:21,0 chr1 181058904 . G . PASS END=181058922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,870:0,72,255:26,0 chr1 181058923 . G . PASS END=181058923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:25,0 chr1 181058924 . G . PASS END=181058972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr1 181058973 . C . PASS END=181058973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:19,0 chr1 181058974 . G . PASS END=181058974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 181058975 . G . PASS END=181058981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 181058982 . G . PASS END=181058989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 181058990 . A . PASS END=181059005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 181059006 . C . PASS END=181059006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:14,0 chr1 181059007 . C . PASS END=181059013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 181059014 . G . PASS END=181059018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 181059019 . C . PASS END=181059019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 181059020 . T . PASS END=181059022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 181382283 . A . PASS END=181382286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:39,0 chr1 181382287 . T . PASS END=181382287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1310:0,48,255:37,0 chr1 181382288 . G . PASS END=181382397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,87,255:40,0 chr1 181382398 . T . PASS END=181382400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 181382401 . C . PASS END=181382402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 181382403 . C . PASS END=181382404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1006:0,68,255:26,0 chr1 181382405 . G . PASS END=181382406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 181382407 . C . PASS END=181382420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 181382421 . T . PASS END=181382421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 181382422 . G . PASS END=181382436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 181382437 . G . PASS END=181382474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:19,0 chr1 181382475 . A . PASS END=181382475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 181382476 . T . PASS END=181382488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 181382489 . C . PASS END=181382503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:12,0 chr1 181382504 . T . PASS END=181382504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 181382505 . G . PASS END=181382517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 181382518 . T . PASS END=181382518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 181382519 . C . PASS END=181382530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 181382531 . G . PASS END=181382531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 181382532 . G . PASS END=181382541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr1 181382542 . G . PASS END=181382542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 181382543 . C . PASS END=181382543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 181382544 . C . PASS END=181382545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 181382546 . G . PASS END=181382578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 181382579 . C . PASS END=181382601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 181382602 . G . PASS END=181382639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,360:0,33,255:13,0 chr1 181382640 . G . PASS END=181382640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 181382641 . A . PASS END=181382642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 181382643 . C . PASS END=181382644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 181382645 . G . PASS END=181382645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 181382646 . C . PASS END=181382646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 181382647 . G . PASS END=181382658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr1 181382659 . A . PASS END=181382659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 181382660 . G . PASS END=181382665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 181382666 . C . PASS END=181382666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 181382667 . G . PASS END=181382667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 181382668 . A . PASS END=181382668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 181382669 . G . PASS END=181382678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,553:0,45,255:16,0 chr1 181382679 . A . PASS END=181382679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 181382680 . T . PASS END=181382685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,545:0,48,255:16,0 chr1 181382686 . G . PASS END=181382689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr1 181382690 . C . PASS END=181382690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 181382691 . C . PASS END=181382696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 181382697 . G . PASS END=181382705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 181382706 . A . PASS END=181382708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 181382709 . G . PASS END=181382710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 181382711 . A . PASS END=181382713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,31,255:9,0 chr1 181382714 . G . PASS END=181382714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:8,0 chr1 181382715 . G . PASS END=181382716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,45,255:9,0 chr1 181452880 . G . PASS END=181452888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,886:0,75,255:25,0 chr1 181452889 . C . PASS END=181452890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 181452891 . T . PASS END=181452891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,0 chr1 181452892 . C . PASS END=181452892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 181452893 . G . PASS END=181452895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 181452896 . G . PASS END=181452915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1133:0,93,255:31,0 chr1 181452916 . A . PASS END=181452916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 181452917 . G . PASS END=181452977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1164:0,90,255:34,0 chr1 181452978 . C . PASS END=181452978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 181452979 . G . PASS END=181452986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1241:0,86,255:33,0 chr1 181452987 . C . PASS END=181452987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1080:0,69,255:31,0 chr1 181452988 . G . PASS END=181453039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1168:0,84,255:37,0 chr1 181453040 . A . PASS END=181453040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 181453041 . A . PASS END=181453052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1086:0,84,255:28,0 chr1 181453053 . T . PASS END=181453068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr1 181453069 . C . PASS END=181453076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr1 181453077 . A . PASS END=181453077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:28,0 chr1 181453078 . C . PASS END=181453078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 181453079 . A . PASS END=181453079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 181453080 . G . PASS END=181453110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1142:0,83,255:33,0 chr1 181453111 . T . PASS END=181453111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 181453112 . G . PASS END=181453118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 181453119 . A . PASS END=181453126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 181453127 . A . PASS END=181453127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 181453128 . A . PASS END=181453143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 181453144 . G . PASS END=181453144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr1 181453145 . C . PASS END=181453147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 181479613 . G . PASS END=181479613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1351:0,108,255:36,0 chr1 181479614 . C . PASS END=181479614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 181479615 . C . PASS END=181479713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,88,255:40,0 chr1 181479714 . G . PASS END=181479718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:26,0 chr1 181480507 . G . PASS END=181480643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,108,1800:0,108,255:40,0 chr1 181480644 . T . PASS END=181480644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:79:56:0,79,1724:0,79,255:39,0 chr1 181480645 . G . PASS END=181480646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,123,255:40,0 chr1 181546902 . C . PASS END=181546915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:26,0 chr1 181546916 . C . PASS END=181546916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 181546917 . A . PASS END=181546918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 181546919 . G . PASS END=181546920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 181546921 . A . PASS END=181546921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 181546922 . C . PASS END=181546922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 181546923 . C . PASS END=181546923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 181546924 . C . PASS END=181546934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:29,0 chr1 181546935 . T . PASS END=181546935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 181546936 . C . PASS END=181546936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 181546937 . A . PASS END=181546937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 181546938 . C . PASS END=181546940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1141:0,90,255:30,0 chr1 181546941 . G . PASS END=181546941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 181546942 . G . PASS END=181546950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 181546951 . A . PASS END=181546951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 181546952 . C . PASS END=181546961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,96,255:33,0 chr1 181546962 . T . PASS END=181546965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:33:0,78,1170:0,86,255:26,0 chr1 181546966 . C . PASS END=181546983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 181546984 . A . PASS END=181546987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1069:0,71,255:26,0 chr1 181546988 . T . PASS END=181546988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 181546989 . C . PASS END=181547005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 181548208 . G . PASS END=181548209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 181548210 . C . PASS END=181548210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 181548211 . T . PASS END=181548211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 181548212 . G . PASS END=181548212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 181548213 . C . PASS END=181548360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:32:0,83,1172:0,83,255:40,0 chr1 181549731 . G . PASS END=181549751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,560:0,48,255:19,0 chr1 181549752 . C . PASS END=181549756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,800:0,62,255:26,0 chr1 181549757 . C . PASS END=181549757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 181549758 . A . PASS END=181549758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 181549759 . C . PASS END=181549896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1128:0,83,255:40,0 chr1 181549897 . C . PASS END=181549909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:33:0,60,900:0,99,255:23,0 chr1 181549910 . A . PASS END=181549912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,69,255:19,0 chr1 181620474 . A . PASS END=181620577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,106,1800:0,106,255:40,0 chr1 181680090 . G . PASS END=181680100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1545:0,113,255:40,0 chr1 181680101 . A . PASS END=181680101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:35:46:0,35,1271:0,35,255:40,4 chr1 181680102 . A . LowGQ END=181680104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:0:47:0,0,1399:0,0,255:40,4 chr1 181680105 . G . PASS END=181680105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:43:49:0,43,1635:0,43,255:40,3 chr1 181680106 . A . PASS END=181680106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:17:48:0,17,1405:0,17,255:40,0 chr1 181680107 . G . PASS END=181680119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:49:0,91,1518:0,91,255:40,0 chr1 181680120 . G . PASS END=181680205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1215:0,83,255:40,0 chr1 181684474 . A . PASS END=181684527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,134,255:40,0 chr1 181685176 . T . PASS END=181685254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:35:0,93,1395:0,94,255:40,0 chr1 181685255 . C . PASS END=181685255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr1 181685256 . T . PASS END=181685259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:29,0 chr1 181685260 . C . PASS END=181685265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,80,255:26,0 chr1 181686229 . G . PASS END=181686229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 181686230 . C . PASS END=181686230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr1 181686231 . A . PASS END=181686253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:34:0,99,1485:0,102,255:40,0 chr1 181686254 . C . PASS END=181686422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:33:0,81,1215:0,86,255:40,0 chr1 181686423 . C . PASS END=181686423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:27,0 chr1 181686424 . T . PASS END=181686425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 181686426 . A . PASS END=181686438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:24,0 chr1 181687191 . A . PASS END=181687303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,119,1637:0,119,255:40,0 chr1 181688887 . G . PASS END=181688999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:37:0,82,1288:0,82,255:40,0 chr1 181689342 . G . PASS END=181689473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:53:0,110,1800:0,110,255:40,0 chr1 181689919 . G . PASS END=181689991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,119,1800:0,119,255:40,2 chr1 181690894 . A . PASS END=181691011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:90:30:0,90,1117:0,90,255:40,0 chr1 181693606 . A . PASS END=181693673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:85:40:0,85,1338:0,85,255:40,0 chr1 181695201 . G . PASS END=181695202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 181695203 . T . PASS END=181695203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,880:0,42,255:25,0 chr1 181695204 . G . PASS END=181695204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:25,0 chr1 181695205 . A . PASS END=181695206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,859:0,81,255:27,0 chr1 181695207 . C . PASS END=181695207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 181695208 . A . PASS END=181695208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 181695209 . G . PASS END=181695209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 181695210 . G . PASS END=181695210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 181695211 . A . PASS END=181695211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 181695212 . G . PASS END=181695212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 181695213 . G . PASS END=181695215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 181695216 . G . PASS END=181695218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 181695219 . G . PASS END=181695219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 181695220 . A . PASS END=181695220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,929:0,54,255:25,0 chr1 181695221 . G . PASS END=181695221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 181695222 . G . PASS END=181695222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 181695223 . C . PASS END=181695298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1048:0,84,255:40,0 chr1 181700311 . A . PASS END=181700367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:92:50:0,92,1571:0,92,255:40,0 chr1 181701520 . G . PASS END=181701523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 181701524 . G . PASS END=181701551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:6,0 chr1 181701552 . T . PASS END=181701568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 181701569 . A . PASS END=181701609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 181701610 . C . PASS END=181701610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 181701611 . C . PASS END=181701632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,443:0,36,255:13,0 chr1 181701633 . C . PASS END=181701636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 181701637 . G . PASS END=181701650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr1 181701651 . C . PASS END=181701672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:16,0 chr1 181701673 . C . PASS END=181701673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr1 181701674 . A . PASS END=181701681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 181701682 . C . PASS END=181701682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 181701683 . A . PASS END=181701684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 181701685 . T . PASS END=181701695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 181701696 . G . PASS END=181701696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 181701697 . C . PASS END=181701697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 181701698 . C . PASS END=181701703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 181701704 . C . PASS END=181701708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 181701709 . A . PASS END=181701738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:18,0 chr1 181701739 . C . PASS END=181701739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr1 181701740 . C . PASS END=181701751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:17,0 chr1 181701752 . A . PASS END=181701752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 181701753 . A . PASS END=181701779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 181701780 . G . PASS END=181701783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 181701784 . G . PASS END=181701785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 181701786 . C . PASS END=181701791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 181701792 . A . PASS END=181701792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,447:0,26,255:9,0 chr1 181701793 . G . PASS END=181701826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:11,0 chr1 181701827 . A . PASS END=181701828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 181701829 . C . PASS END=181701832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 181701833 . A . PASS END=181701833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr1 181701834 . G . PASS END=181701858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:11,0 chr1 181701859 . G . PASS END=181701859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 181701860 . G . PASS END=181701882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,459:0,36,255:13,0 chr1 181701883 . C . PASS END=181701897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,519:0,42,255:18,0 chr1 181701898 . T . PASS END=181701898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 181701899 . G . PASS END=181701934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 181701935 . G . PASS END=181701938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 181701939 . T . PASS END=181701941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 181701942 . C . PASS END=181701959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:25,0 chr1 181701960 . G . PASS END=181702049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1127:0,83,255:39,0 chr1 181702050 . G . PASS END=181702050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 181702051 . C . PASS END=181702053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:31,0 chr1 181702054 . G . PASS END=181702054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:31,0 chr1 181702055 . G . PASS END=181702088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1139:0,80,255:32,0 chr1 181702089 . G . PASS END=181702089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 181702090 . G . PASS END=181702090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 181702091 . G . PASS END=181702092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr1 181702093 . G . PASS END=181702093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 181702094 . A . PASS END=181702135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:22:0,60,792:0,61,255:26,0 chr1 181702136 . A . PASS END=181702136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr1 181702137 . C . PASS END=181702153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 181702154 . G . PASS END=181702154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 181702155 . C . PASS END=181702156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 181702157 . C . PASS END=181702170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 181702573 . G . PASS END=181702579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr1 181702580 . A . PASS END=181702588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 181702589 . G . PASS END=181702647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:19,0 chr1 181702648 . G . PASS END=181702649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 181702650 . C . PASS END=181702652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 181702653 . A . PASS END=181702762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,839:0,63,255:25,0 chr1 181702763 . A . PASS END=181702763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 181702764 . G . PASS END=181702798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 181702799 . A . PASS END=181702799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 181702800 . A . PASS END=181702822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 181702823 . A . PASS END=181702831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 181702832 . G . PASS END=181702832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:16,0 chr1 181702833 . T . PASS END=181702833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,637:0,8,255:15,0 chr1 181702834 . C . PASS END=181702837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr1 181702838 . G . PASS END=181702838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:15,0 chr1 181702839 . T . PASS END=181702839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 181702840 . C . PASS END=181702841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:15,0 chr1 181702842 . C . PASS END=181702842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 181702843 . C . PASS END=181702847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,529:0,12,255:16,0 chr1 181702848 . C . PASS END=181702849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 181702850 . G . PASS END=181702852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:14,0 chr1 181702853 . G . PASS END=181702853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 181702854 . T . PASS END=181702854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:14,0 chr1 181702855 . G . PASS END=181702856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,504:0,6,255:14,0 chr1 181702857 . A . PASS END=181702858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 181702859 . C . PASS END=181702859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:14,0 chr1 181702860 . C . PASS END=181702860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr1 181702861 . C . PASS END=181702862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 181702863 . T . LowGQ END=181702865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,426:0,0,255:14,0 chr1 181702866 . T . PASS END=181702866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 181702867 . G . PASS END=181702867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 181702868 . G . PASS END=181702868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 181702869 . A . PASS END=181702869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 181702870 . C . PASS END=181702872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 181702873 . A . PASS END=181702873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 181702874 . A . LowGQ END=181702876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:14:0,0,457:0,0,255:11,0 chr1 181702877 . G . PASS END=181702877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:10,0 chr1 181702878 . T . PASS END=181702878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr1 181702879 . G . PASS END=181702879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 181702880 . G . PASS END=181702881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:11,0 chr1 181702882 . G . PASS END=181702883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 181702884 . A . PASS END=181702885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 181702886 . A . PASS END=181702886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 181705411 . T . PASS END=181705570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:48:0,106,1775:0,106,255:40,0 chr1 181706661 . G . PASS END=181706784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:31:0,83,1148:0,83,255:40,0 chr1 181706785 . A . PASS END=181706785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr1 181706786 . A . PASS END=181706790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 181707503 . G . PASS END=181707562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,148,255:40,0 chr1 181708283 . A . PASS END=181708390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:35:0,91,1168:0,91,255:40,0 chr1 181708396 . G . PASS END=181708405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,121,255:40,0 chr1 181719612 . G . PASS END=181719623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,195,255:40,0 chr1 181721278 . G . PASS END=181721375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,151,255:40,0 chr1 181724373 . G . PASS END=181724533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:41:0,117,1755:0,123,255:40,0 chr1 181725092 . A . PASS END=181725109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:30:0,90,967:0,90,255:40,0 chr1 181725110 . T C, 194.47 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,24,0:0,25,0:144:232,147,0,1884,147,1884:255,147,0:0,0:1.9447e+02,1.4447e+02,0.0000e+00,4.5000e+02,1.7924e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,20:0,0,32,17 chr1 181725111 . G . PASS END=181725147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,133,255:40,0 chr1 181725148 . A . PASS END=181725229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1163:0,80,255:40,0 chr1 181726061 . A . PASS END=181726061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,615:0,57,255:19,0 chr1 181726062 . G . PASS END=181726074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:25,0 chr1 181726075 . C . PASS END=181726076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 181726077 . G . PASS END=181726078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 181726079 . A . PASS END=181726084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 181726085 . G . PASS END=181726085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 181726086 . A . PASS END=181726220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1135:0,85,255:40,0 chr1 181726221 . G . PASS END=181726221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1257:0,56,255:25,0 chr1 181726222 . G . PASS END=181726222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:25,0 chr1 181726223 . G . PASS END=181726223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 181726224 . G . PASS END=181726224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:27,0 chr1 181726225 . A . PASS END=181726232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr1 181726233 . A . PASS END=181726235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:27,0 chr1 181726236 . G . PASS END=181726236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr1 181726237 . A . PASS END=181726243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:26,0 chr1 181726244 . C . PASS END=181726246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 181726247 . C . PASS END=181726247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr1 181726248 . C . PASS END=181726258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:21:0,42,630:0,63,255:19,0 chr1 181726259 . T . PASS END=181726259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:14,0 chr1 181726260 . G . PASS END=181726262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 181727083 . A . PASS END=181727247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:34:0,81,1215:0,102,255:40,0 chr1 181727894 . T . PASS END=181727998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,120,1800:0,124,255:40,2 chr1 181727999 . T . PASS END=181727999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:60:54:0,60,1697:0,60,255:40,2 chr1 181728000 . T . PASS END=181728004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,114,1800:0,114,255:40,0 chr1 181731710 . A . PASS END=181731710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr1 181731711 . A . PASS END=181731793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:71:0,120,1800:0,170,255:40,0 chr1 181732542 . C . PASS END=181732657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:33:0,85,1249:0,85,255:40,0 chr1 181732658 . G . PASS END=181732667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,117,255:32,0 chr1 181735682 . G . PASS END=181735747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1322:0,87,255:40,0 chr1 181740429 . G . PASS END=181740520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,105,1598:0,105,255:40,0 chr1 181741202 . G . PASS END=181741211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr1 181741212 . G . PASS END=181741233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:26,0 chr1 181741234 . T . PASS END=181741263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,1002:0,80,255:34,0 chr1 181741264 . A . PASS END=181741300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:33:0,96,1260:0,99,255:38,0 chr1 181741301 . C T, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.181;ReadPosRankSum=4.148;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,19,0:0.514,0.000:37:10,10,0:8,9,0:48:85,0,50,680,644,1323:255,0,255:17,0:5.0000e+01,6.5492e-05,5.2943e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,12,7:13,5,9,10 chr1 181741302 . G . PASS END=181741309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1304:0,94,255:36,0 chr1 181741310 . C . PASS END=181741310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 181741311 . G . PASS END=181741338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1163:0,80,255:36,0 chr1 181741339 . T . PASS END=181741339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 181741340 . C . PASS END=181741340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:56:32:0,56,894:0,56,255:27,0 chr1 181741341 . T . PASS END=181741342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,95,255:28,0 chr1 181741343 . C . PASS END=181741344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr1 181741345 . T . PASS END=181741352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 181741353 . T . PASS END=181741353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:28,0 chr1 181741354 . T . PASS END=181741367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr1 181745237 . A . PASS END=181745363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:38:0,81,1215:0,110,255:40,0 chr1 181745364 . G . PASS END=181745364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 181748579 . C . PASS END=181748581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 181748582 . C . PASS END=181748582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 181748583 . A . PASS END=181748675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1078:0,84,255:40,0 chr1 181750563 . T . PASS END=181750659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:44:0,97,1528:0,97,255:40,0 chr1 181752815 . A . PASS END=181752815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 181752816 . G . PASS END=181752819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1335:0,80,255:32,0 chr1 181752820 . G . PASS END=181752820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1242:0,77,255:32,0 chr1 181752821 . G . PASS END=181752824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1257:0,89,255:33,0 chr1 181752825 . T . PASS END=181752825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:34,0 chr1 181752826 . G . PASS END=181752826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1227:0,37,255:35,0 chr1 181752827 . A . PASS END=181752827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 181752828 . T . PASS END=181752828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1312:0,62,255:36,0 chr1 181752829 . G . PASS END=181752876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:40:0,81,1421:0,81,255:40,0 chr1 181752877 . T . PASS END=181752882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:44:0,81,1215:0,116,255:31,0 chr1 181752883 . T . PASS END=181752889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:63:43:0,63,945:0,129,255:23,0 chr1 181752890 . C . PASS END=181752898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:57:35:0,57,855:0,105,255:19,0 chr1 181752899 . C . PASS END=181752899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:20,0 chr1 181752900 . T . PASS END=181752916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:51:32:0,51,765:0,96,255:19,0 chr1 181752917 . A . PASS END=181752920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:36:32:0,36,540:0,96,255:13,0 chr1 181753797 . G . PASS END=181753799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 181753800 . G . PASS END=181753904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1125:0,86,255:39,0 chr1 181754454 . C . PASS END=181754554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:66:0,120,1800:0,182,255:40,0 chr1 181754849 . A . PASS END=181754955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:93:40:0,93,1395:0,99,255:40,0 chr1 181759581 . G . PASS END=181759587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1349:0,81,255:37,0 chr1 181759588 . C . PASS END=181759588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr1 181759589 . G . PASS END=181759692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:37:0,108,1438:0,109,255:40,0 chr1 181762801 . G . PASS END=181762801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 181762802 . A . PASS END=181762805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 181762806 . A . PASS END=181762808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:18,0 chr1 181762809 . G . PASS END=181762830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,893:0,72,255:26,0 chr1 181762831 . C . PASS END=181762833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 181762834 . C . PASS END=181762834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 181762835 . C . PASS END=181762893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1095:0,80,255:34,0 chr1 181762894 . G . PASS END=181762894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 181762895 . C . PASS END=181762895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 181762896 . A . PASS END=181762896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 181762897 . T . PASS END=181762910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1119:0,80,255:31,0 chr1 181762911 . T . PASS END=181762923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:27:0,72,1080:0,77,255:26,0 chr1 181762924 . C . PASS END=181762924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,869:0,26,255:22,0 chr1 181762925 . C . PASS END=181762925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 181762926 . C . PASS END=181762926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 181762927 . C . PASS END=181762929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 181764000 . G . PASS END=181764158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1064:0,87,255:40,0 chr1 181764159 . C . PASS END=181764169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:25,0 chr1 181764170 . C . PASS END=181764172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 181764173 . T . PASS END=181764177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 181764178 . C . PASS END=181764180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:16,0 chr1 181765804 . G . PASS END=181765824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 181765825 . G . PASS END=181765830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr1 181765831 . G . PASS END=181765831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 181765832 . G . PASS END=181765875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,892:0,63,255:26,0 chr1 181765876 . C . PASS END=181765883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 181765884 . G . PASS END=181765884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 181765885 . T . PASS END=181765943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,934:0,84,255:32,0 chr1 181765944 . C . PASS END=181765961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr1 181765962 . A . PASS END=181765968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:23:0,41,810:0,41,255:19,0 chr1 181765969 . G . PASS END=181765969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 181765970 . C . PASS END=181765980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 181765981 . C . PASS END=181765981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 181765982 . G . PASS END=181765994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 181766437 . T . PASS END=181766437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 181767428 . G . PASS END=181767532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:6,0 chr1 181767533 . C . PASS END=181767550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,241:0,21,241:9,0 chr1 181767551 . C . PASS END=181767551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 181767552 . T . PASS END=181767611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr1 181767612 . T . PASS END=181767612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 181767613 . G . PASS END=181767614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 181767615 . C . PASS END=181767622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:12,0 chr1 181767623 . G . PASS END=181767626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 181767627 . T . PASS END=181767627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 181767628 . G . PASS END=181767657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:19,0 chr1 181767658 . T . PASS END=181767684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,687:0,63,255:22,0 chr1 181767685 . C . PASS END=181767685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,707:0,35,255:19,0 chr1 181767686 . C . PASS END=181767689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 181767690 . A . PASS END=181767690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 181767691 . T . PASS END=181767710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr1 181767711 . T . PASS END=181767711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,621:0,33,255:19,0 chr1 181767712 . C . PASS END=181767714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 181767715 . C . PASS END=181767715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 181767716 . G . PASS END=181767716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 181767717 . A . PASS END=181767757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 181767758 . T . PASS END=181767758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:15,0 chr1 181767759 . G . PASS END=181767790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr1 181767791 . G . PASS END=181767792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 181767793 . C . PASS END=181767797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 181767798 . C . PASS END=181767799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 181767800 . A . PASS END=181767807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:18,0 chr1 181767808 . G . PASS END=181767808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:17,0 chr1 181767809 . G . PASS END=181767829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 181767830 . T . PASS END=181767832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 181767833 . G . PASS END=181767836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 181767837 . C . PASS END=181767891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,346:0,36,255:13,0 chr1 181767892 . C . PASS END=181767919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,520:0,41,255:19,0 chr1 181767920 . G . PASS END=181767920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 181767921 . G . PASS END=181767936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:16,0 chr1 181767937 . G . PASS END=181767937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 181767938 . C . PASS END=181767938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 181767939 . T . PASS END=181767948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 181767949 . G . LowGQ END=181767949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr1 181767950 . G . PASS END=181767963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 181767964 . A . PASS END=181767964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:12,0 chr1 181767965 . T . PASS END=181767970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 182025439 . T . PASS END=182025440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 182025441 . A . PASS END=182025441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 182025442 . C . PASS END=182025443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 182025444 . C . PASS END=182025456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:17,0 chr1 182025457 . A . PASS END=182025457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 182025458 . G . PASS END=182025458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 182025459 . G . PASS END=182025459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:17,0 chr1 182025460 . G . PASS END=182025461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 182025462 . T . PASS END=182025462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 182025463 . G . PASS END=182025468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 182025469 . C . PASS END=182025478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 182025479 . G . PASS END=182025480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 182025481 . G . PASS END=182025481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 182025482 . C . PASS END=182025519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:24,0 chr1 182025520 . G . PASS END=182025520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 182025521 . G . PASS END=182025534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr1 182025535 . G . PASS END=182025535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 182025536 . C . PASS END=182025557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:26:0,65,969:0,65,255:26,0 chr1 182025558 . T . PASS END=182025567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 182025568 . G . PASS END=182025569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 182025570 . G . PASS END=182025571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 182025572 . A . PASS END=182025572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 182025573 . T . PASS END=182025583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 182025584 . T . PASS END=182025585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 182025586 . G . PASS END=182025589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 182025590 . A . PASS END=182025613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1014:0,68,255:26,0 chr1 182025614 . C . PASS END=182025615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182025616 . G . PASS END=182025616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 182025617 . C . PASS END=182025617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182025618 . C . PASS END=182025657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 182025658 . C . PASS END=182025658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 182025659 . T . PASS END=182025675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,925:0,65,255:26,0 chr1 182025676 . G . PASS END=182025676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr1 182025677 . G . PASS END=182025683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:29,0 chr1 182025684 . A . PASS END=182025686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,1056:0,76,255:26,0 chr1 182025687 . G . PASS END=182025687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:25,0 chr1 182025688 . G . PASS END=182025688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 182025689 . G . PASS END=182025692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 182025693 . A . PASS END=182025693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 182025694 . G . PASS END=182025694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 182025695 . G . PASS END=182025707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,950:0,68,255:26,0 chr1 182025708 . G . PASS END=182025708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182025709 . C . PASS END=182025709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 182025710 . G . PASS END=182025713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182025714 . A . PASS END=182025731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,969:0,65,255:25,0 chr1 182025732 . C . PASS END=182025732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:23,0 chr1 182025733 . A . PASS END=182025742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1022:0,68,255:26,0 chr1 182025743 . C . PASS END=182025743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:25,0 chr1 182025744 . G . PASS END=182025763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 182025764 . G . PASS END=182025773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,828:0,53,255:19,0 chr1 182025774 . C . PASS END=182025775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:20,0 chr1 182025776 . A . PASS END=182025787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 182025788 . C . PASS END=182025797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 182025798 . A . PASS END=182025798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 182025799 . C . PASS END=182025799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 182025800 . T . PASS END=182025800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 182025801 . T . PASS END=182025814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 182025815 . C . PASS END=182025816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 182025817 . G . PASS END=182025824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,44,255:13,0 chr1 182025825 . G . PASS END=182025827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:14,0 chr1 182025828 . T . PASS END=182025838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 182025839 . G . PASS END=182025841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 182025842 . A . PASS END=182025842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 182025843 . G . PASS END=182025844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 182025845 . T . PASS END=182025867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 182025868 . G . PASS END=182025868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 182025869 . C . PASS END=182025869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 182025870 . C . PASS END=182025873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 182025874 . G . PASS END=182025909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 182025910 . G . PASS END=182025910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 182025911 . C . PASS END=182025913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 182025914 . T . PASS END=182025915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 182025916 . G . PASS END=182025920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 182025921 . C . PASS END=182025944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,459:0,39,255:13,0 chr1 182025945 . A . PASS END=182025945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,280:0,6,255:11,0 chr1 182025946 . C . PASS END=182025947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 182025948 . C . PASS END=182025948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 182025949 . C . PASS END=182025952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 182025953 . T . PASS END=182025953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 182025954 . C . PASS END=182025959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 182025960 . C . PASS END=182025960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 182025961 . G . PASS END=182025961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 182025962 . G . PASS END=182025962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 182025963 . G . PASS END=182025966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 182025967 . G . PASS END=182025967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 182025968 . C . PASS END=182026013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,551:0,41,255:17,0 chr1 182026014 . A . PASS END=182026014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 182026015 . C . PASS END=182026033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,44,255:19,0 chr1 182026034 . A . PASS END=182026037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 182026038 . C . PASS END=182026045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 182026046 . G . PASS END=182026095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,798:0,63,255:25,0 chr1 182026096 . C . PASS END=182026097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:18,0 chr1 182026098 . G . PASS END=182026146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:21:0,60,715:0,61,255:26,0 chr1 182026147 . T . PASS END=182026147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 182026148 . T . PASS END=182026148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 182026149 . T . PASS END=182026153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1023:0,84,255:29,0 chr1 182026154 . C . PASS END=182026154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 182026155 . C . PASS END=182026235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1141:0,80,255:36,0 chr1 182026236 . C . PASS END=182026236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 182026237 . G . PASS END=182026296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1194:0,86,255:37,0 chr1 182026297 . T . PASS END=182026324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,921:0,62,255:26,0 chr1 182026325 . C . PASS END=182026325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 182026326 . C . PASS END=182026326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 182026327 . G . PASS END=182026327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 182026328 . C . PASS END=182026342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:24,0 chr1 182026343 . G . PASS END=182026361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:40:18:0,40,576:0,40,255:19,0 chr1 182026362 . G . PASS END=182026362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 182026363 . C . PASS END=182026371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,643:0,51,255:17,0 chr1 182026372 . G . PASS END=182026372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 182026373 . G . PASS END=182026376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 182026377 . G . PASS END=182026378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 182026379 . C . PASS END=182026386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 182026387 . C . PASS END=182026387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 182026388 . A . PASS END=182026388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:12,0 chr1 182026389 . G . PASS END=182026389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:14,0 chr1 182026390 . G . PASS END=182026390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 182026391 . C . PASS END=182026392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 182026393 . C . PASS END=182026393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:13,0 chr1 182026394 . C . PASS END=182026394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 182026395 . T . PASS END=182026396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,630:0,41,255:14,0 chr1 182026397 . T . PASS END=182026397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:14,0 chr1 182026398 . A . PASS END=182026401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 182026402 . A . PASS END=182026404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 182026405 . C . PASS END=182026423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 182026424 . T . PASS END=182026429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 182026430 . C . PASS END=182026432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 182026433 . C . PASS END=182026435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 182026436 . G . PASS END=182026439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 182026440 . G . PASS END=182026440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 182026441 . G . PASS END=182026456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,666:0,44,255:19,0 chr1 182026457 . C . PASS END=182026457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:17,0 chr1 182026458 . T . PASS END=182026482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:19,0 chr1 182026483 . G . PASS END=182026483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr1 182026484 . G . PASS END=182026484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 182026485 . C . PASS END=182026487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 182026488 . C . PASS END=182026490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 182026491 . G . PASS END=182026492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 182026493 . C . PASS END=182026496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 182026497 . C . PASS END=182026497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 182026498 . T . PASS END=182026498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182026499 . G . PASS END=182026499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,728:0,19,255:19,0 chr1 182026500 . G . PASS END=182026501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182026502 . G . PASS END=182026502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 182026503 . T . PASS END=182026511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,870:0,63,255:24,0 chr1 182026512 . C . PASS END=182026512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 182026513 . C . PASS END=182026572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:21:0,60,858:0,61,255:26,0 chr1 182026573 . A . PASS END=182026573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 182026574 . C . PASS END=182026601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,861:0,69,255:24,0 chr1 182026602 . T . PASS END=182026647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,911:0,81,255:30,0 chr1 182026648 . G . PASS END=182026659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 182026660 . A . PASS END=182026666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 182026667 . A . PASS END=182026667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:27,0 chr1 182026668 . C . PASS END=182026669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 182026670 . G . PASS END=182026681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:26:0,78,1000:0,78,255:26,0 chr1 182026682 . G . PASS END=182026682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 182026683 . C . PASS END=182026742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,837:0,66,255:26,0 chr1 182026743 . A . PASS END=182026743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 182026744 . C . PASS END=182026746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182026747 . T . PASS END=182026747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,618:0,49,255:19,0 chr1 182026748 . T . PASS END=182026757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 182026758 . G . PASS END=182026758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 182026759 . A . PASS END=182026762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 182026763 . C . PASS END=182026791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:18:0,47,720:0,47,255:19,0 chr1 182026792 . T . PASS END=182026795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 182026796 . G . PASS END=182026796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 182026797 . G . PASS END=182026798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 182026799 . G . PASS END=182026825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,592:0,51,255:19,0 chr1 182026826 . A . PASS END=182026826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 182026827 . C . PASS END=182026839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 182026840 . A . PASS END=182026840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,599:0,26,255:17,0 chr1 182026841 . C . PASS END=182026842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 182026843 . G . PASS END=182026843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 182026844 . G . PASS END=182026855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 182026856 . A . PASS END=182026856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 182026857 . T . PASS END=182026870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,578:0,51,255:18,0 chr1 182026871 . T . PASS END=182026871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 182026872 . G . PASS END=182026885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 182026886 . G . PASS END=182026886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182026887 . C . PASS END=182026898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,698:0,54,255:18,0 chr1 182026899 . C . PASS END=182026902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,584:0,18,255:18,0 chr1 182026903 . G . PASS END=182026903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 182026904 . A . PASS END=182026912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 182026913 . T . PASS END=182026917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 182026918 . T . PASS END=182026918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:16,0 chr1 182026919 . T . PASS END=182026921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 182026922 . C . PASS END=182026931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 182026932 . G . PASS END=182026933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 182026934 . G . PASS END=182026953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 182026954 . T . PASS END=182026954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 182026955 . T . PASS END=182026961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 182026962 . T . PASS END=182026963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 182026964 . A . PASS END=182026967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182026968 . G . PASS END=182026972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 182026973 . C . PASS END=182026974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182026975 . G . PASS END=182026976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 182026977 . C . PASS END=182026990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 182026991 . A . PASS END=182026991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 182026992 . C . PASS END=182027011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,955:0,72,255:26,0 chr1 182027012 . T . PASS END=182027015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182027016 . C . PASS END=182027016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 182027017 . G . PASS END=182027023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr1 182027024 . C . PASS END=182027026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 182027027 . C . PASS END=182027029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 182027030 . T . PASS END=182027030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 182027031 . C . PASS END=182027034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 182027035 . A . PASS END=182027035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 182027036 . T . PASS END=182027039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 182027040 . C . PASS END=182027043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr1 182027044 . C . PASS END=182027050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 182027051 . T . PASS END=182027051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1008:0,76,255:28,0 chr1 182027052 . T . PASS END=182027058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 182027059 . C . PASS END=182027060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 182027061 . G . PASS END=182027062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 182027063 . A . PASS END=182027063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:28,0 chr1 182027064 . T . PASS END=182027077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr1 182027078 . G . PASS END=182027078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 182027079 . C . PASS END=182027090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr1 182027091 . A . PASS END=182027091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,978:0,56,255:26,0 chr1 182027092 . G . PASS END=182027097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 182027098 . G . PASS END=182027098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:27,0 chr1 182027099 . A . PASS END=182027107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr1 182027108 . G . PASS END=182027119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,65,255:26,0 chr1 182027120 . C . PASS END=182027120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:20,0 chr1 182027121 . T . PASS END=182027136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,922:0,62,255:23,0 chr1 182027137 . T . PASS END=182027144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 182027145 . T . PASS END=182027145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr1 182350849 . G . PASS END=182350849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 182350904 . G . PASS END=182350904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182350909 . C . PASS END=182350909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182350936 . G . PASS END=182350936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:26,0 chr1 182350969 . G . PASS END=182350969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182350985 . C . PASS END=182350985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:25,0 chr1 182351077 . G . PASS END=182351077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 182351175 . C . PASS END=182351175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 182351227 . G . PASS END=182351227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 182351236 . A . PASS END=182351236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 182351308 . G . PASS END=182351308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 182351337 . T . PASS END=182351337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 182351368 . G . PASS END=182351368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 182351410 . A . PASS END=182351410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182351412 . G . PASS END=182351412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182351465 . G . PASS END=182351465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 182351546 . C . PASS END=182351546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 182351562 . C . PASS END=182351562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 182351579 . C . PASS END=182351579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr1 182351587 . G . PASS END=182351587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:21:16:0,21,315:0,48,255:7,0 chr1 182351608 . A . PASS END=182351608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:15:16:0,15,225:0,48,255:5,0 chr1 182351621 . T . PASS END=182351621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:3:17:0,3,45:0,12,255:0,0 chr1 182351627 . T A, 90.31 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,16,0:1.000,0.000:16:0,7,0:0,9,0:40:128,43,0,228,228,228:255,31,0:0,0:9.0314e+01,4.0314e+01,4.0410e-04,2.2508e+02,2.5985e+02,2.2809e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,6,10:0,0,9,7:182351627 chr1 182351750 . G . PASS END=182351750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 182351768 . G . PASS END=182351768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 182351848 . T . PASS END=182351848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 182351864 . A . PASS END=182351864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182351894 . G . PASS END=182351894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1449:0,114,255:38,0 chr1 182351944 . C . PASS END=182351944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 182351973 . T . PASS END=182351973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 182352030 . C . PASS END=182352030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 182352098 . T . PASS END=182352098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1382:0,114,255:38,0 chr1 182352248 . A . PASS END=182352248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 182352251 . T . PASS END=182352251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 182352259 . C . PASS END=182352259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr1 182352322 . C . PASS END=182352322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr1 182352482 . C . PASS END=182352483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:29,0 chr1 182352507 . C . PASS END=182352507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 182352559 . A . PASS END=182352559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,929:0,65,255:22,0 chr1 182352690 . A . PASS END=182352691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 182352818 . T . PASS END=182352818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 182352823 . A . PASS END=182352823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 182352853 . T . PASS END=182352853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182353013 . C . PASS END=182353013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 182353042 . T . PASS END=182353042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 182353059 . C . PASS END=182353059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 182353141 . G . PASS END=182353141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 182353234 . C . PASS END=182353235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 182353243 . G . PASS END=182353243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 182353251 . C . PASS END=182353251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 182353268 . G . PASS END=182353268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 182353291 . T . PASS END=182353291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 182353330 . A . PASS END=182353330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1350:0,111,255:37,0 chr1 182353371 . C . PASS END=182353371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 182353411 . C . PASS END=182353411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 182353438 . T . PASS END=182353438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,114,1710:0,168,255:38,0 chr1 182353540 . T . PASS END=182353858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:41:0,93,1395:0,105,255:40,0 chr1 182354492 . T . PASS END=182354502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:25,0 chr1 182354503 . C . PASS END=182354503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 182354504 . T . PASS END=182354528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 182354529 . A . PASS END=182354538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 182354539 . G . PASS END=182354539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 182354540 . C . PASS END=182354675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1170:0,82,255:40,0 chr1 182354676 . C . PASS END=182354676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:31,0 chr1 182354677 . A . PASS END=182354683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:34:0,93,1395:0,102,255:32,0 chr1 182354684 . A . PASS END=182354684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:31,0 chr1 182354685 . A . PASS END=182354691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr1 182354895 . C . PASS END=182354899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 182354900 . C . PASS END=182354900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 182354901 . A . PASS END=182354916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:25,0 chr1 182354917 . T . PASS END=182354917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 182354918 . T . PASS END=182355007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,900:0,62,255:26,0 chr1 182355008 . C . PASS END=182355008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr1 182355009 . A . PASS END=182355019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:17:0,42,630:0,51,255:16,0 chr1 182355020 . G . PASS END=182355022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 182355391 . C . PASS END=182355400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 182355401 . T . PASS END=182355401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 182355402 . G . PASS END=182355421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,894:0,72,255:25,0 chr1 182355422 . A . PASS END=182355422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 182355423 . C . PASS END=182355437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,970:0,78,255:26,0 chr1 182355438 . T . PASS END=182355455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:30,0 chr1 182355456 . T . PASS END=182355457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 182355458 . C . PASS END=182355459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 182355460 . C . PASS END=182355471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:28:0,69,1035:0,84,255:26,0 chr1 182355472 . C . PASS END=182355474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 182355475 . A . PASS END=182355475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 182355476 . C . PASS END=182355477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182355478 . A . PASS END=182355487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:25,0 chr1 182355488 . G . PASS END=182355488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:25,0 chr1 182355489 . T . PASS END=182355508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr1 182355509 . C . PASS END=182355537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr1 182356266 . C . PASS END=182356268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182356269 . C . PASS END=182356270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 182356271 . G . PASS END=182356279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:30,0 chr1 182356280 . T . PASS END=182356280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 182356281 . T . PASS END=182356361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:30:0,90,1139:0,90,255:40,0 chr1 182356362 . A . PASS END=182356389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,105,255:40,0 chr1 182356390 . T . PASS END=182356398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,84,255:25,0 chr1 182356399 . A G, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,13,0:0,15,0:81:169,84,0,1077,84,1077:255,84,0:0,0:1.3127e+02,8.1269e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,15:0,0,14,14 chr1 182356400 . G . PASS END=182356408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 182356409 . A . PASS END=182356409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 182356410 . A . PASS END=182356415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182356416 . A . PASS END=182356416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 182356417 . C . PASS END=182356427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,893:0,64,255:24,0 chr1 182357707 . C . PASS END=182357885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:96:32:0,96,1188:0,96,255:40,0 chr1 182359632 . C . PASS END=182359641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 182359642 . G . PASS END=182359642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr1 182359643 . A . PASS END=182359651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,787:0,66,255:24,0 chr1 182359652 . C . PASS END=182359652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 182359653 . G . PASS END=182359666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:26,0 chr1 182359667 . G . PASS END=182359670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 182359671 . T . PASS END=182359671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,910:0,50,255:26,0 chr1 182359672 . C . PASS END=182359681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr1 182359682 . T . PASS END=182359682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 182359683 . C . PASS END=182359689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 182359690 . T . PASS END=182359690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 182359691 . G . PASS END=182359691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 182359692 . G . PASS END=182359692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 182359693 . A . PASS END=182359696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 182359697 . G . PASS END=182359697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 182359698 . C . PASS END=182359699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 182359700 . T . PASS END=182359700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 182359701 . T . PASS END=182359702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 182359703 . G . PASS END=182359730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,74,255:26,0 chr1 182359731 . T . PASS END=182359731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 182359732 . G . PASS END=182359758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr1 182359759 . A . PASS END=182359759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 182359760 . G . PASS END=182359818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:26,0 chr1 182359819 . G . PASS END=182359819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:24,0 chr1 182359820 . G . PASS END=182359853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 182359854 . T . PASS END=182359854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,775:0,25,255:21,0 chr1 182359855 . C . PASS END=182359862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 182359863 . T . PASS END=182359863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,674:0,36,255:21,0 chr1 182359864 . T . PASS END=182359884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr1 182359885 . C . PASS END=182359900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 182359901 . C . PASS END=182359914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 182359915 . C . PASS END=182359921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 182359922 . C T, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=3.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:6,6,0:4,6,0:48:85,0,50,335,351,686:255,0,255:9,0:5.0000e+01,6.6010e-05,5.2826e+01,3.3473e+02,3.8620e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,5,7:5,5,7,5 chr1 182359923 . T . PASS END=182359942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:23,0 chr1 182359943 . A . PASS END=182359959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 182359960 . T . PASS END=182359978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 182359979 . G . PASS END=182359979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr1 182359980 . G . PASS END=182359983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 182359984 . C . PASS END=182359987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 182360310 . C . PASS END=182360321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,107,1410:0,107,255:38,0 chr1 182360322 . C . PASS END=182360322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:37,0 chr1 182360323 . A . PASS END=182360342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:38:0,94,1427:0,94,255:40,0 chr1 182360803 . C . PASS END=182360803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 182360833 . G . PASS END=182360833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 182360853 . A . PASS END=182360853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 182360856 . G . PASS END=182360856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 182360880 . C . PASS END=182360880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 182360910 . T . PASS END=182360910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 182360919 . C . PASS END=182360919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 182360973 . C . PASS END=182360973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 182361008 . G . PASS END=182361008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 182361114 . A . PASS END=182361114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 182361124 . G . PASS END=182361124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 182361189 . G . PASS END=182361189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 182361222 . C . PASS END=182361222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 182361260 . G . PASS END=182361260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 182361263 . C . PASS END=182361263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 182368799 . T . PASS END=182369040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1156:0,83,255:40,0 chr1 182369041 . C . PASS END=182369045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,99,1485:0,105,255:33,0 chr1 182369046 . A . PASS END=182369046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:30,0 chr1 182369047 . T . PASS END=182369059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1266:0,99,255:35,0 chr1 182369060 . C . PASS END=182369060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 182369061 . C . PASS END=182369077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1318:0,92,255:35,0 chr1 182369078 . G A, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,16,0:0,21,0:108:196,111,0,1427,111,1427:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,21:0,0,17,20 chr1 182369079 . G . PASS END=182369115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,105,1575:0,113,255:40,0 chr1 182369116 . A . PASS END=182369195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:38:0,96,1404:0,101,255:40,0 chr1 182369196 . A . PASS END=182369232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:40:0,84,1377:0,84,255:40,0 chr1 182369233 . A G, 164.35 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,20,0:0,19,0:114:202,117,0,1440,117,1440:255,120,0:0,0:1.6435e+02,1.1435e+02,0.0000e+00,4.5000e+02,1.4912e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,17:0,0,21,18 chr1 182369234 . A . PASS END=182369270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:35:0,91,1173:0,91,255:40,0 chr1 182369271 . G . PASS END=182369485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1357:0,81,255:40,0 chr1 182369486 . A . PASS END=182369486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1269:0,67,255:38,0 chr1 182369487 . A . PASS END=182369564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:41:0,86,1339:0,86,255:40,0 chr1 182369565 . C . PASS END=182369565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:37,0 chr1 182369566 . T . PASS END=182369620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1189:0,91,255:40,0 chr1 182419301 . A . PASS END=182419313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,162,255:40,0 chr1 182423093 . A . PASS END=182423108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,114,1684:0,114,255:40,0 chr1 182423109 . A . PASS END=182423145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,140,255:40,0 chr1 182423146 . G A, 42.94 PASS DP=59;MQ=250.00;MQRankSum=6.309;ReadPosRankSum=5.786;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,21,0:0.356,0.000:59:15,10,0:23,11,0:43:78,0,50,751,1322,2073:255,0,255:38,0:4.2944e+01,2.4230e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,19,10,11:16,22,13,8 chr1 182423147 . A . PASS END=182423175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,132,255:40,0 chr1 182427441 . C . PASS END=182427528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:68:0,120,1800:0,171,255:40,0 chr1 182429139 . A . PASS END=182429249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:56:0,120,1800:0,139,255:40,0 chr1 182429250 . A . PASS END=182429268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,207,255:40,0 chr1 182429759 . A . PASS END=182429765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:35,0 chr1 182429766 . A . PASS END=182429826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1106:0,89,255:35,0 chr1 182429827 . A . PASS END=182429850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:24:0,62,945:0,62,255:26,0 chr1 182429851 . C . PASS END=182429855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr1 182429856 . T . PASS END=182429858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 182429859 . A . PASS END=182429882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:18,0 chr1 182429883 . C . PASS END=182429889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:17:0,33,495:0,35,255:13,0 chr1 182429890 . A . PASS END=182429891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 182440417 . C . PASS END=182440514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1138:0,91,255:40,0 chr1 182440515 . A . PASS END=182440521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:34:0,63,945:0,102,255:25,0 chr1 182441531 . G . PASS END=182441534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182441535 . A . PASS END=182441535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 182441536 . G . PASS END=182441536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182441537 . A . PASS END=182441537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:22,0 chr1 182441538 . A . PASS END=182441548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:26,0 chr1 182441549 . T . PASS END=182441635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1017:0,80,255:37,0 chr1 182441636 . G . PASS END=182441636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 182441637 . G . PASS END=182441638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 182441639 . C . PASS END=182441663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,77,255:26,0 chr1 182441664 . G . PASS END=182441680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:19:0,42,630:0,57,255:19,0 chr1 182441681 . A . PASS END=182441692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 182442710 . A . PASS END=182442714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,821:0,66,255:22,0 chr1 182442715 . C . PASS END=182443058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1210:0,81,255:40,2 chr1 182443059 . G . PASS END=182443059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:31,0 chr1 182443060 . C . PASS END=182443065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:30,0 chr1 182443066 . G . PASS END=182443066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 182443067 . C . PASS END=182443075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:33,0 chr1 182443076 . T . PASS END=182443077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 182443078 . C . PASS END=182443086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:30,0 chr1 182443087 . G . PASS END=182443087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 182443088 . A . PASS END=182443092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:27,0 chr1 182443093 . T . PASS END=182443095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 182443096 . C . PASS END=182443102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182443103 . A . PASS END=182443103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 182443104 . G . PASS END=182443607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,995:0,83,255:40,0 chr1 182443608 . C . PASS END=182443660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,892:0,71,255:26,0 chr1 182443661 . A . PASS END=182443661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 182443662 . G . PASS END=182443671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr1 182443672 . T . PASS END=182443677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:19,0 chr1 182445329 . C . PASS END=182445454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:47:0,120,1800:0,136,255:40,0 chr1 182457420 . A . PASS END=182457482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,139,255:40,0 chr1 182457596 . A . PASS END=182457678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,116,1430:0,116,255:40,0 chr1 182458115 . A . PASS END=182458325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:30:0,81,1215:0,86,255:40,0 chr1 182458326 . T . PASS END=182458337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr1 182462157 . A . PASS END=182462264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:54:0,114,1800:0,114,255:40,0 chr1 182491139 . A . PASS END=182491172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,155,255:40,0 chr1 182491173 . A . PASS END=182491244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,165,255:40,0 chr1 182496714 . A . PASS END=182496714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 182496715 . A . PASS END=182496791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:32:0,89,1203:0,89,255:40,0 chr1 182496792 . C . PASS END=182496828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:52:0,120,1800:0,126,255:40,0 chr1 182496829 . A G, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.701;ReadPosRankSum=1.321;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,39,0:0.609,0.000:64:16,22,0:9,17,0:46:85,0,46,1314,863,2177:255,0,255:18,0:5.0000e+01,9.9144e-05,4.8922e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,16,23,16:10,15,22,17 chr1 182496830 . T . PASS END=182496866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,129,255:40,0 chr1 182496867 . A . PASS END=182496907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,111,1665:0,133,255:40,0 chr1 182499379 . A . PASS END=182499496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,102,1468:0,102,255:40,1 chr1 182499925 . G . PASS END=182499927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 182499928 . T . PASS END=182499928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr1 182499929 . A . PASS END=182500045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:34:0,89,1258:0,89,255:40,0 chr1 182501797 . A . PASS END=182501895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:51:0,120,1800:0,137,255:40,0 chr1 182501896 . C . PASS END=182501926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:55:0,120,1800:0,152,255:40,0 chr1 182509382 . A . PASS END=182509394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:26,0 chr1 182509395 . A . PASS END=182509413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:32:0,88,1194:0,88,255:35,0 chr1 182509414 . T . PASS END=182509414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:35,0 chr1 182509415 . C . PASS END=182509471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:36:0,95,1269:0,95,255:38,0 chr1 182509472 . T . PASS END=182509472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:36,0 chr1 182509473 . T . PASS END=182509498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1352:0,98,255:38,0 chr1 182509499 . G . PASS END=182509499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1333:0,62,255:29,0 chr1 182509500 . G . PASS END=182509509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:31:0,90,1350:0,93,255:31,0 chr1 182509510 . G . PASS END=182509510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 182509511 . T . PASS END=182509512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 182509513 . A . PASS END=182509513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 182509514 . A . PASS END=182509517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:30,0 chr1 182509518 . T . PASS END=182509518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr1 182509519 . G . PASS END=182509523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1101:0,90,255:30,0 chr1 182509524 . C . PASS END=182509536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:28:0,66,948:0,67,255:26,0 chr1 182509537 . T . PASS END=182509537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:20,0 chr1 182509538 . T . PASS END=182509539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:20,0 chr1 182509540 . T . PASS END=182509541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 182509542 . T . PASS END=182509543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 182509544 . C . PASS END=182509545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 182509546 . G . PASS END=182509556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:23,0 chr1 182517452 . A . PASS END=182517590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:85:34:0,85,1142:0,85,255:40,0 chr1 182517835 . G . PASS END=182517959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:92:34:0,92,1252:0,92,255:40,0 chr1 182519316 . A . PASS END=182519319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:61:0,120,1800:0,170,255:40,0 chr1 182520235 . G . PASS END=182520344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:38:0,90,1291:0,90,255:40,0 chr1 182522590 . G . PASS END=182522676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:33:0,96,1349:0,97,255:40,0 chr1 182523762 . C . PASS END=182523807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1071:0,80,255:37,0 chr1 182523808 . G . PASS END=182523808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:31,0 chr1 182523809 . C . PASS END=182523828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr1 182524857 . A . PASS END=182524881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,108,1295:0,108,255:40,0 chr1 182525159 . A . PASS END=182525192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,148,255:40,0 chr1 182529414 . G . PASS END=182529447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,104,1747:0,104,255:40,0 chr1 182544527 . T . PASS END=182544529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 182544530 . G . PASS END=182544531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 182544532 . A . PASS END=182544534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 182544535 . C . PASS END=182544535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 182544536 . A . PASS END=182544536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 182544537 . G . PASS END=182544537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 182544538 . G . PASS END=182544709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1049:0,86,255:40,0 chr1 182544710 . C . PASS END=182544713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 182545391 . T . PASS END=182545524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,100,1366:0,100,255:40,0 chr1 182549089 . T . PASS END=182549142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,147,255:40,0 chr1 182550360 . C . PASS END=182550360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1233:0,96,255:32,0 chr1 182550361 . T . PASS END=182550361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 182550362 . T . PASS END=182550492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1215:0,84,255:40,0 chr1 182551188 . C . PASS END=182551213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,906:0,62,255:25,0 chr1 182551214 . A . PASS END=182551214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 182551215 . C . PASS END=182551220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr1 182551221 . A . PASS END=182551251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1008:0,81,255:40,0 chr1 182551252 . C . PASS END=182551252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1441:0,68,255:36,0 chr1 182551253 . A . PASS END=182551255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:41:0,84,1435:0,84,255:39,0 chr1 182551256 . A . PASS END=182551256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1307:0,60,255:37,0 chr1 182551257 . T . PASS END=182551391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,92,255:40,0 chr1 182551392 . T . PASS END=182551393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:30:0,78,1170:0,90,255:26,0 chr1 182553216 . C . PASS END=182553301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1260:0,96,255:40,0 chr1 182554462 . C . PASS END=182554470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1285:0,100,255:40,0 chr1 182554471 . T . PASS END=182554471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1390:0,76,255:38,0 chr1 182554472 . G . PASS END=182554684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:38:0,85,1233:0,85,255:40,0 chr1 182554685 . T . PASS END=182554685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1192:0,58,255:27,0 chr1 182554686 . G . PASS END=182554698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,86,255:30,0 chr1 182554699 . T . PASS END=182554699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 182554700 . G . PASS END=182554709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 182554710 . C . PASS END=182554711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 182554712 . G . PASS END=182554712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182554713 . C . PASS END=182554719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,956:0,70,255:26,0 chr1 182554720 . G . PASS END=182554722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182554723 . A . PASS END=182554727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,939:0,67,255:26,0 chr1 182554728 . A . PASS END=182554728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr1 182554729 . C . PASS END=182554729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 182554730 . T . PASS END=182554730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 182554731 . T . PASS END=182554908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:31:0,84,1260:0,93,255:40,0 chr1 182554909 . C . PASS END=182554909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1474:0,52,255:34,0 chr1 182554910 . C . PASS END=182555029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1337:0,98,255:40,0 chr1 182555030 . A . PASS END=182555030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:31,0 chr1 182555031 . A . PASS END=182555042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:33,0 chr1 182555043 . T . PASS END=182555045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 182555046 . G . PASS END=182555054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1123:0,80,255:28,0 chr1 182555055 . C . PASS END=182555057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 182555058 . C . PASS END=182555058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 182555059 . G . PASS END=182555065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,914:0,73,255:26,0 chr1 182555066 . C . PASS END=182555075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 182555076 . G . PASS END=182555082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 182555083 . T . PASS END=182555088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 182555089 . G . PASS END=182555089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 182555090 . T . PASS END=182555090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,706:0,50,255:26,0 chr1 182555091 . T . PASS END=182555091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182555092 . T . PASS END=182555106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,923:0,64,255:26,0 chr1 182555107 . G . PASS END=182555107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:21,0 chr1 182555108 . C . PASS END=182555116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,64,255:22,0 chr1 182555117 . T . PASS END=182555117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr1 182555118 . G . PASS END=182555121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 182555122 . T . PASS END=182555134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,652:0,43,255:19,0 chr1 182555135 . T . PASS END=182555135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 182555136 . G . PASS END=182555144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,607:0,40,255:19,0 chr1 182555145 . A . PASS END=182555145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 182555146 . T . PASS END=182555149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,615:0,43,255:19,0 chr1 182555150 . T . PASS END=182555155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 182555156 . C . PASS END=182555156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 182555157 . T . PASS END=182555162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 182555163 . T . PASS END=182555165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,803:0,56,255:23,0 chr1 182555166 . A . PASS END=182555170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 182555171 . C . PASS END=182555179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 182555180 . C . PASS END=182555195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,808:0,67,255:26,0 chr1 182555196 . T . PASS END=182555197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182555198 . C . PASS END=182555200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 182555201 . C . PASS END=182555201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182555202 . A . PASS END=182555209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:26,0 chr1 182555210 . G . PASS END=182555218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 182555219 . A . PASS END=182555219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 182555220 . G . PASS END=182555221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 182555222 . C . PASS END=182555222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:26,0 chr1 182555223 . T . PASS END=182555224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 182555225 . C . PASS END=182555225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:26,0 chr1 182555226 . C . PASS END=182555227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,974:0,73,255:27,0 chr1 182555228 . T . PASS END=182555228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 182555229 . C . PASS END=182555229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 182555230 . T . PASS END=182555281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:29:0,83,1116:0,83,255:33,0 chr1 182555282 . A . PASS END=182555282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:32,0 chr1 182555283 . G . PASS END=182555290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1241:0,99,255:33,0 chr1 182555291 . A . PASS END=182555291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1137:0,66,255:29,0 chr1 182555292 . T . PASS END=182555301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1188:0,85,255:32,0 chr1 182555302 . C . PASS END=182555305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,80,255:26,0 chr1 182555306 . G . PASS END=182555308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 182555309 . C . PASS END=182555340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,909:0,62,255:26,0 chr1 182555341 . T . PASS END=182555341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182555342 . A . PASS END=182555350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,998:0,68,255:26,0 chr1 182555351 . G . PASS END=182555351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 182555352 . G . PASS END=182555364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,936:0,73,255:26,0 chr1 182555365 . C . PASS END=182555365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182555366 . C . PASS END=182555369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 182555370 . A . PASS END=182555381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:28,0 chr1 182555382 . A . PASS END=182555418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1188:0,83,255:34,0 chr1 182555419 . C A, 40.73 PASS DP=36;MQ=250.00;MQRankSum=4.816;ReadPosRankSum=1.661;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,12,0:0.333,0.000:36:11,7,0:13,5,0:40:76,0,50,392,850,1242:255,0,255:22,0:4.0726e+01,3.8934e-04,5.3000e+01,3.9206e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,15,7,5:12,12,8,4 chr1 182555420 . G . PASS END=182555456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,103,1358:0,103,255:40,0 chr1 182555457 . T . PASS END=182555565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:43:0,96,1518:0,96,255:40,0 chr1 182555566 . A . PASS END=182555602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:36:0,92,1280:0,92,255:40,0 chr1 182555603 . A G, 44.08 PASS DP=36;MQ=250.00;MQRankSum=4.907;ReadPosRankSum=2.272;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,13,0:0.361,0.000:36:11,8,0:12,5,0:44:79,0,50,465,786,1251:255,0,255:22,0:4.4084e+01,1.9130e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,5,8:10,13,4,9 chr1 182555604 . G . PASS END=182555640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1365:0,98,255:37,0 chr1 182555641 . T . PASS END=182555686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1205:0,86,255:36,0 chr1 182555687 . A . PASS END=182555688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,80,255:25,0 chr1 182555689 . G . PASS END=182555726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1149:0,80,255:32,0 chr1 182555727 . T . PASS END=182555727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:30,0 chr1 182555728 . C . PASS END=182555738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 182555739 . T . PASS END=182555739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:30,0 chr1 182555740 . G . PASS END=182555834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,95,255:40,0 chr1 182555835 . T . PASS END=182555839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 182555840 . T . PASS END=182555840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 182555841 . T . PASS END=182555841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 182555842 . G . PASS END=182555870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1094:0,90,255:32,0 chr1 182555871 . T . PASS END=182555871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:26,0 chr1 182555872 . C . PASS END=182555873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr1 182555874 . A . PASS END=182555874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 182555875 . C . PASS END=182555880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:27,0 chr1 182555881 . C . PASS END=182555882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 182555883 . C . PASS END=182555884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr1 182555885 . T . PASS END=182555885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:26,0 chr1 182555886 . C . PASS END=182555886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 182555887 . T . PASS END=182555895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 182555896 . A . PASS END=182555896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 182555897 . G . PASS END=182555918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:25,0 chr1 182555919 . T . PASS END=182555932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:19:0,50,765:0,50,255:19,0 chr1 182555933 . G . PASS END=182555941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:13,0 chr1 182569427 . T . PASS END=182569428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 182569429 . A . PASS END=182569429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:22,0 chr1 182569430 . G . PASS END=182569430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 182569431 . G . PASS END=182569445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:30,0 chr1 182569446 . T G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=3.111;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:6,7,0:9,8,0:48:85,0,50,528,537,1065:255,0,255:15,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,11,4:7,8,9,6 chr1 182569447 . C . PASS END=182569483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:29:0,87,1034:0,87,255:40,0 chr1 182569484 . G . PASS END=182569588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:38:0,98,1396:0,98,255:40,0 chr1 182569589 . G . PASS END=182569616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1164:0,80,255:35,0 chr1 182569617 . G . PASS END=182569617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr1 182569618 . T . PASS END=182569625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:32,0 chr1 182569626 . T C, 143.30 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,16,0:0,16,0:93:181,96,0,1216,96,1216:255,99,0:0,0:1.4330e+02,9.3302e+01,0.0000e+00,4.5000e+02,1.2807e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,19:0,0,21,11 chr1 182569627 . G . PASS END=182569631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1255:0,86,255:33,0 chr1 182569632 . T . PASS END=182569632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1094:0,52,255:31,0 chr1 182569633 . C . PASS END=182569648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:33,0 chr1 182571101 . C . PASS END=182571233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1006:0,82,255:40,0 chr1 182571234 . G . PASS END=182571239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 182571240 . A . PASS END=182571267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 182571555 . T . PASS END=182571619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:33:0,84,1217:0,86,255:40,0 chr1 182572364 . T . PASS END=182572474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:40:0,104,1465:0,104,255:40,0 chr1 182573351 . C . PASS END=182573351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 182573352 . T . PASS END=182573352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 182573353 . C . PASS END=182573371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:19,0 chr1 182573372 . A . PASS END=182573378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 182573379 . C . PASS END=182573380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 182573381 . A . PASS END=182573381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 182573382 . G . PASS END=182573385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 182573386 . G . PASS END=182573386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 182573387 . C . PASS END=182573393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 182573394 . T . PASS END=182573394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:20,0 chr1 182615870 . C . PASS END=182615881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,893:0,64,255:26,0 chr1 182615882 . C . PASS END=182615904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 182615905 . C . PASS END=182615905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:28,0 chr1 182615906 . T . PASS END=182615907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1123:0,80,255:29,0 chr1 182615908 . A . PASS END=182615908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1040:0,79,255:27,0 chr1 182615909 . G . PASS END=182615910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 182615911 . A . PASS END=182615911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 182615912 . C . PASS END=182616013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:29:0,83,1164:0,83,255:40,0 chr1 182616014 . C . PASS END=182616014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:27,0 chr1 182616015 . T . PASS END=182616037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 182616038 . G . PASS END=182616052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 182617272 . C . PASS END=182617272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 182617273 . T . PASS END=182617273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 182617274 . C . PASS END=182617278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 182617279 . G . PASS END=182617279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 182617280 . G . PASS END=182617280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 182617281 . A . PASS END=182617286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 182617287 . C . PASS END=182617290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr1 182617291 . T . PASS END=182617418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1071:0,80,255:39,0 chr1 182617419 . A . PASS END=182617428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,68,255:26,0 chr1 182617429 . G . PASS END=182617430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 182617431 . C . PASS END=182617434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 182617435 . C . PASS END=182617438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:51:26:0,51,765:0,65,255:19,0 chr1 182635104 . A . PASS END=182635168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,137,255:40,1 chr1 182636007 . T . PASS END=182636011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:38,0 chr1 182636012 . A . PASS END=182636012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1258:0,70,255:37,0 chr1 182636013 . G . PASS END=182636108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,116,1580:0,116,255:40,0 chr1 182638759 . C . PASS END=182638784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,117,1755:0,122,255:40,0 chr1 182640792 . T . PASS END=182640792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 182640793 . G . PASS END=182640813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1144:0,96,255:40,0 chr1 182640814 . C . PASS END=182640850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,108,1620:0,112,255:40,0 chr1 182640851 . T G, 45.78 PASS DP=42;MQ=250.00;MQRankSum=5.332;ReadPosRankSum=3.007;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,16,0:0.390,0.000:41:11,8,0:14,8,0:45:81,0,50,564,886,1450:255,0,255:22,0:4.5778e+01,1.3668e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,4,12:14,11,12,4:182640851 chr1 182640852 . C . PASS END=182640857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,105,1575:0,111,255:35,0 chr1 182640858 . A . PASS END=182640858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:33,0 chr1 182640859 . A . PASS END=182640863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1341:0,105,255:35,0 chr1 182640864 . T C, 42.36 PASS DP=35;MQ=250.00;MQRankSum=4.778;ReadPosRankSum=4.778;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,12,0:0.343,0.000:35:11,4,0:12,8,0:42:77,0,50,421,823,1244:255,0,255:23,0:4.2358e+01,2.7414e-04,5.3000e+01,4.2123e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,2,10:14,9,10,2:182640851 chr1 182640865 . T . PASS END=182640865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1280:0,105,255:35,0 chr1 182641954 . C . PASS END=182641959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,167,255:40,0 chr1 182763507 . A . PASS END=182763574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:45:0,105,1627:0,105,255:40,0 chr1 182772833 . A . PASS END=182772906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,108,1477:0,108,255:40,0 chr1 182775280 . T . PASS END=182775367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:28:0,83,980:0,83,255:40,0 chr1 182775494 . A . PASS END=182775527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 182775528 . G . PASS END=182775535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 182775536 . C . PASS END=182775536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 182775537 . C . PASS END=182775547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 182775548 . G . PASS END=182775569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,68,255:26,0 chr1 182775570 . C . PASS END=182775588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1088:0,84,255:31,0 chr1 182775589 . A . PASS END=182775589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,858:0,43,255:28,0 chr1 182775590 . G . PASS END=182775632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1178:0,83,255:34,0 chr1 182775633 . G . PASS END=182775633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 182775634 . T . PASS END=182775648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,90,255:31,0 chr1 182775649 . C . PASS END=182775663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr1 182775664 . A . PASS END=182775664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,856:0,47,255:21,0 chr1 182775665 . A . PASS END=182775666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:23,0 chr1 182781291 . G . PASS END=182781296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,152,255:40,0 chr1 182781297 . T . PASS END=182781348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,137,255:40,0 chr1 182783918 . G . PASS END=182783988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,108,1620:0,123,255:40,0 chr1 182783989 . C . PASS END=182783989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1457:0,68,255:36,0 chr1 182783990 . A . PASS END=182783993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:37,0 chr1 182785849 . A . PASS END=182785941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,118,1568:0,118,255:40,0 chr1 182787676 . T . PASS END=182787683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,988:0,84,255:31,0 chr1 182787684 . G . PASS END=182787684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 182787685 . A . PASS END=182787751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:31:0,89,1103:0,89,255:40,0 chr1 182787752 . T . PASS END=182787752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:57:54:0,57,1674:0,57,255:40,0 chr1 182787753 . C . PASS END=182787824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,115,1755:0,115,255:40,0 chr1 182787948 . C . PASS END=182787994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,163,255:40,0 chr1 182791250 . T . PASS END=182791334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,153,255:40,0 chr1 182794916 . T . PASS END=182794955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:91:0,120,1800:0,224,255:40,0 chr1 182797859 . G . PASS END=182797866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 182797867 . G . PASS END=182797867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 182797868 . T . PASS END=182797874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,963:0,75,255:26,0 chr1 182797875 . G . PASS END=182798003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1025:0,84,255:40,0 chr1 182798004 . C . PASS END=182798004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr1 182798005 . A . PASS END=182798029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1188:0,85,255:35,0 chr1 182798030 . A . PASS END=182798043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,77,255:26,0 chr1 182798738 . A . PASS END=182798814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,103,1324:0,103,255:40,0 chr1 182811702 . A . PASS END=182811812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,136,255:40,0 chr1 182812429 . G . PASS END=182812456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,146,255:40,0 chr1 182812457 . G . PASS END=182812569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:70:0,120,1800:0,194,255:40,0 chr1 182821368 . G . PASS END=182821368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 182821369 . T . PASS END=182821373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 182821374 . T . PASS END=182821384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,693:0,63,255:23,0 chr1 182821385 . A . PASS END=182821385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 182821386 . C . PASS END=182821389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,902:0,64,255:26,0 chr1 182821390 . C . PASS END=182821412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1009:0,81,255:29,0 chr1 182821413 . A . PASS END=182821413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 182821414 . A . PASS END=182821414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,920:0,87,255:29,0 chr1 182821415 . T . PASS END=182821415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 182821416 . G . PASS END=182821420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr1 182821421 . A . PASS END=182821431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 182821432 . C . PASS END=182821434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182821435 . C . PASS END=182821450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 182821451 . T . PASS END=182821451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,844:0,59,255:23,0 chr1 182821452 . C . PASS END=182821452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 182821453 . T . PASS END=182821453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 182821454 . T . PASS END=182821479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,771:0,72,255:24,0 chr1 182822441 . A . PASS END=182822451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 182822452 . G . PASS END=182822452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 182822453 . A . PASS END=182822457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr1 182822458 . G . PASS END=182822458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 182822459 . G . PASS END=182822460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 182822461 . G . PASS END=182822461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 182822462 . C . PASS END=182822462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 182822463 . C . PASS END=182822468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 182822469 . C . PASS END=182822469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 182822470 . T . PASS END=182822471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 182822472 . T . PASS END=182822472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 182822473 . G . PASS END=182822474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 182822475 . T . PASS END=182822475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 182822476 . G . PASS END=182822477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 182822478 . T . PASS END=182822478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr1 182822479 . C . PASS END=182822479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 182822480 . C . PASS END=182822480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 182822481 . T . PASS END=182822485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 182822486 . C . PASS END=182822486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 182822487 . C . PASS END=182822488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 182822489 . C . PASS END=182822490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 182822491 . T . PASS END=182822493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,557:0,32,255:14,0 chr1 182822494 . G . PASS END=182822494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 182822495 . A . PASS END=182822495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 182822496 . C . PASS END=182822499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 182822500 . G . PASS END=182822500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 182822501 . G . PASS END=182822502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:15,0 chr1 182822503 . G . PASS END=182822503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 182822504 . C . PASS END=182822515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,497:0,42,255:15,0 chr1 182822516 . A . PASS END=182822516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 182822517 . T . PASS END=182822550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,423:0,42,255:14,0 chr1 182822551 . G . PASS END=182822553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 182823165 . A . PASS END=182823296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:37:0,87,1305:0,100,255:40,0 chr1 182823297 . G . PASS END=182823297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:29,0 chr1 182823298 . G . PASS END=182823305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 182823306 . C . PASS END=182823313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:24,0 chr1 182825667 . G . PASS END=182825713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,164,255:40,0 chr1 182827239 . G . PASS END=182827250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:30,0 chr1 182827251 . G . PASS END=182827251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 182827252 . A . PASS END=182827345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:30:0,83,1073:0,83,255:40,0 chr1 182827346 . G . PASS END=182827346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1255:0,42,255:32,0 chr1 182827347 . G . PASS END=182827366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1215:0,86,255:33,0 chr1 182827367 . G . PASS END=182827375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,73,255:26,0 chr1 182827686 . G . PASS END=182827759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,134,255:40,0 chr1 182827760 . T . PASS END=182827775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,157,255:40,0 chr1 182827868 . C . PASS END=182828029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,111,1515:0,111,255:40,0 chr1 182828175 . G . PASS END=182828252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,146,255:40,0 chr1 182829128 . A . PASS END=182829304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:28:0,84,1054:0,84,255:40,0 chr1 182829305 . A . PASS END=182829319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:25,0 chr1 182835579 . C . PASS END=182835620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:32:0,85,1166:0,85,255:39,0 chr1 182835621 . T . PASS END=182835621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:38,0 chr1 182835622 . T . PASS END=182835712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1178:0,83,255:40,0 chr1 182835713 . T . PASS END=182835719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:23,0 chr1 182835720 . G . PASS END=182835720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 182836096 . G . PASS END=182836178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,173,255:40,0 chr1 182841472 . A . PASS END=182841479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 182841480 . C . PASS END=182841480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 182841481 . C . PASS END=182841628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:32:0,90,1350:0,95,255:40,0 chr1 182843989 . A . PASS END=182844089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:46:0,120,1800:0,120,255:40,0 chr1 182845185 . G . PASS END=182845398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:51:0,120,1800:0,140,255:40,0 chr1 182845582 . G . PASS END=182845676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,138,255:40,0 chr1 182845965 . G . PASS END=182846038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:67:0,120,1800:0,185,255:40,0 chr1 182847156 . G . PASS END=182847160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 182847161 . A . PASS END=182847165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 182847166 . A . PASS END=182847166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,697:0,47,255:19,0 chr1 182847167 . A . PASS END=182847177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr1 182847178 . G . PASS END=182847189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:31,0 chr1 182847190 . A . PASS END=182847190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr1 182847191 . T . PASS END=182847290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1117:0,80,255:40,0 chr1 182847291 . C . PASS END=182847291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 182847292 . C . PASS END=182847294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 182847295 . G . PASS END=182847296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 182847297 . T . PASS END=182847305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 182847306 . G . PASS END=182847308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,976:0,70,255:25,0 chr1 182848385 . A . PASS END=182848542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1161:0,80,255:40,0 chr1 182848543 . G . PASS END=182848545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 182849632 . A . PASS END=182849743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:42:0,99,1637:0,99,255:40,0 chr1 182850399 . C . PASS END=182850560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,120,1800:0,129,255:40,0 chr1 182850655 . A . PASS END=182850689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,126,255:40,0 chr1 182850690 . A . PASS END=182850726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,150,255:40,0 chr1 182850727 . T C, 217.63 PASS DP=57;MQ=234.15;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,25,0:0,32,0:168:255,171,0,2152,171,2152:255,171,0:0,0:2.1763e+02,1.6763e+02,0.0000e+00,4.5000e+02,2.0240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,30:0,0,33,24 chr1 182850728 . T . PASS END=182850764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,138,255:40,0 chr1 182850765 . A . PASS END=182850782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,108,1589:0,108,255:40,0 chr1 182852274 . A . PASS END=182852277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 182852278 . T . PASS END=182852503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,981:0,87,255:40,0 chr1 182852655 . A . PASS END=182852667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1380:0,101,255:39,0 chr1 182852668 . C . PASS END=182852668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr1 182852669 . C . PASS END=182852770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1161:0,80,255:40,0 chr1 182853748 . G . PASS END=182853751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 182853752 . A . PASS END=182853755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr1 182853756 . T . PASS END=182853757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,790:0,50,255:23,0 chr1 182853758 . C . PASS END=182853762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr1 182853763 . A . PASS END=182853764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr1 182853765 . C . PASS END=182853766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 182853767 . C . PASS END=182853773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 182853774 . C . PASS END=182853774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 182853775 . T . PASS END=182853921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:27:0,80,964:0,80,255:40,0 chr1 182853922 . T . PASS END=182853922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1197:0,77,255:28,0 chr1 182853923 . A . PASS END=182853924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 182853925 . C . PASS END=182853925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 182853926 . A . PASS END=182853930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:27,0 chr1 182853931 . T . PASS END=182853931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 182853932 . A . PASS END=182853932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 182853933 . T . PASS END=182853933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 182853934 . G . PASS END=182853935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 182853936 . T . PASS END=182853948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:25:0,63,907:0,67,255:26,0 chr1 182856218 . G . PASS END=182856231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,906:0,72,255:25,0 chr1 182856232 . C . PASS END=182856232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 182856233 . A . PASS END=182856238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:26,0 chr1 182856239 . T . PASS END=182856240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182856241 . C . PASS END=182856241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:25,0 chr1 182856242 . C . PASS END=182856243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182856244 . A . PASS END=182856244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 182856245 . G . PASS END=182856245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182856246 . A . PASS END=182856246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,946:0,70,255:28,0 chr1 182856247 . T . PASS END=182856373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1151:0,86,255:39,0 chr1 182856374 . T . PASS END=182856374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 182856375 . C . PASS END=182856380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr1 182856381 . G . PASS END=182856381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:32,0 chr1 182856382 . G . PASS END=182856465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1217:0,86,255:39,0 chr1 182856466 . C . PASS END=182856466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr1 182856467 . T . PASS END=182856485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1192:0,83,255:31,0 chr1 182856486 . T . PASS END=182856486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 182856487 . C . PASS END=182856488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182856489 . G . PASS END=182856489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 182856490 . G . PASS END=182856501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:28,0 chr1 182856502 . G . PASS END=182856505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 182856506 . A . PASS END=182856510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:30,0 chr1 182856511 . G . PASS END=182856511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:29,0 chr1 182856512 . T . PASS END=182856516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1208:0,83,255:31,0 chr1 182856517 . G . PASS END=182856517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 182856518 . G . PASS END=182856522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,82,255:29,0 chr1 182856523 . A . PASS END=182856530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:28:0,75,1125:0,84,255:26,0 chr1 182856531 . G . PASS END=182856531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr1 182856532 . G . PASS END=182856533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 182856534 . T . PASS END=182856534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:23,0 chr1 182856535 . A . PASS END=182856545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,61,255:24,0 chr1 182856546 . G . PASS END=182856546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 182856547 . G . PASS END=182856551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 182856552 . G . PASS END=182856552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 182856553 . G . PASS END=182856561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 182856562 . G . PASS END=182856569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 182869118 . T . PASS END=182869334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:96:37:0,96,1372:0,98,255:40,0 chr1 182869335 . T . PASS END=182869335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:30,0 chr1 182869336 . T . PASS END=182869354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1180:0,83,255:32,0 chr1 182869355 . G . PASS END=182869367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:24,0 chr1 182869368 . A . PASS END=182869369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,56,255:19,0 chr1 182872174 . C . PASS END=182872296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:36:0,81,1215:0,108,255:40,0 chr1 182873315 . C . PASS END=182873323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,659:0,41,255:19,0 chr1 182873324 . A . PASS END=182873324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 182873325 . G . PASS END=182873326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 182873327 . T . PASS END=182873327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:18,0 chr1 182873328 . A . PASS END=182873331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,692:0,46,255:19,0 chr1 182873332 . C . PASS END=182873332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr1 182873333 . A . PASS END=182873333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:18,0 chr1 182873334 . C . PASS END=182873336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:25,0 chr1 182873337 . T . PASS END=182873337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 182873338 . C . PASS END=182873340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 182873341 . T . PASS END=182873341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:25,0 chr1 182873342 . A . PASS END=182873353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,887:0,62,255:26,0 chr1 182873354 . A . PASS END=182873354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 182873355 . G . PASS END=182873355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 182873356 . C . PASS END=182873356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 182873357 . C . PASS END=182873357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 182873358 . C . PASS END=182873358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 182873359 . C . PASS END=182873359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr1 182873360 . T . PASS END=182873360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 182873361 . G . PASS END=182873361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 182873362 . T . PASS END=182873363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 182873364 . A . PASS END=182873364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 182873365 . G . PASS END=182873365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 182873366 . A . PASS END=182873367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:28,0 chr1 182873368 . C . PASS END=182873370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:33,0 chr1 182873371 . A . PASS END=182873371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:31,0 chr1 182873372 . C . PASS END=182873389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1202:0,81,255:38,0 chr1 182873390 . T . PASS END=182873390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:38,0 chr1 182873391 . T . PASS END=182873391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1386:0,101,255:38,0 chr1 182873392 . T . PASS END=182873392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1315:0,78,255:38,0 chr1 182873393 . T . PASS END=182873399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1405:0,104,255:39,0 chr1 182873400 . C . PASS END=182873400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:34,0 chr1 182873401 . A . PASS END=182873526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:37:0,93,1402:0,93,255:40,0 chr1 182873527 . G . PASS END=182873527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr1 182873528 . T . PASS END=182873536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:34,0 chr1 182873537 . A . PASS END=182873538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1022:0,71,255:31,0 chr1 182873539 . T . PASS END=182873560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1114:0,88,255:33,0 chr1 182873561 . A . PASS END=182873561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1218:0,75,255:28,0 chr1 182873562 . A . PASS END=182873565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:33:0,82,1095:0,82,255:29,0 chr1 182874631 . C . PASS END=182874784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:96:40:0,96,1389:0,96,255:40,0 chr1 182898782 . C . PASS END=182898887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:72:0,120,1800:0,200,255:40,0 chr1 182908311 . C . PASS END=182908529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:34:0,92,1325:0,92,255:40,0 chr1 182908602 . A . PASS END=182908688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:77:0,120,1800:0,215,255:40,0 chr1 182909464 . C . PASS END=182909465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 182909466 . G . PASS END=182909466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 182909467 . A . PASS END=182909476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:30,0 chr1 182909477 . A . PASS END=182909477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:29,0 chr1 182909478 . G . PASS END=182909487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:34,0 chr1 182909488 . A G, 50.00 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=2.921;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,18,0:0.514,0.000:35:7,9,0:10,9,0:48:85,0,50,644,555,1199:255,0,255:13,0:5.0000e+01,6.5751e-05,5.2910e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,3,12,6:6,11,11,7 chr1 182909489 . T . PASS END=182909525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:35:0,91,1219:0,91,255:40,0 chr1 182909526 . C . PASS END=182909673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:39:0,87,1305:0,101,255:40,0 chr1 182909674 . G . PASS END=182909678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr1 182920453 . C . PASS END=182920602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:30:0,87,1305:0,90,255:40,0 chr1 182921864 . C . PASS END=182921864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:17,0 chr1 182921865 . T . PASS END=182921867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 182921868 . C . PASS END=182921868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 182921869 . A . PASS END=182921869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 182921870 . G . PASS END=182921870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 182921871 . T . PASS END=182921871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 182921872 . C . PASS END=182921875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:23,0 chr1 182921876 . C . PASS END=182921876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 182921877 . A . PASS END=182921879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,864:0,69,255:24,0 chr1 182921880 . A . PASS END=182921881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr1 182921882 . T . PASS END=182921885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 182921886 . T . PASS END=182921886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr1 182921887 . C . PASS END=182921902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 182921903 . C . PASS END=182921903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 182921904 . T . PASS END=182921906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:25,0 chr1 182921907 . T . PASS END=182921907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 182921908 . C . PASS END=182921908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 182921909 . G . PASS END=182921923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,909:0,62,255:24,0 chr1 182921924 . C . PASS END=182921924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 182921925 . C . PASS END=182921925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 182921926 . T . PASS END=182921926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 182921927 . C . PASS END=182921927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 182921928 . A . PASS END=182921928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr1 182921929 . T . PASS END=182921940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,776:0,66,255:22,0 chr1 182921941 . A . PASS END=182921941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:19,0 chr1 182921942 . G . PASS END=182921942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182921943 . A . PASS END=182921943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 182921944 . C . PASS END=182921944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 182921945 . T . PASS END=182921956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,729:0,47,255:18,0 chr1 182921957 . C . PASS END=182921957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:17,0 chr1 182921958 . T . PASS END=182921961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:18,0 chr1 182921962 . C . PASS END=182921962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 182921963 . C . PASS END=182921972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:15,0 chr1 182921973 . T . PASS END=182921974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 182921975 . C . PASS END=182921975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 182921976 . T . PASS END=182921977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 182921978 . A . PASS END=182921992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 182921993 . G . PASS END=182921993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 182921994 . G . PASS END=182921999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 182922000 . T . PASS END=182922003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 182922004 . C . PASS END=182922008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:10,0 chr1 182922009 . G . PASS END=182922009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 182922010 . C . PASS END=182922072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,372:0,30,255:12,0 chr1 182922073 . C . PASS END=182922073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 182922074 . C . PASS END=182922084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr1 182922085 . C . PASS END=182922085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 182922086 . C . PASS END=182922100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr1 182922101 . C . PASS END=182922101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 182922102 . G . PASS END=182922106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 182922107 . A . PASS END=182922107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 182922108 . G . PASS END=182922128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 182922129 . A . PASS END=182922129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 182922130 . C . PASS END=182922130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 182922131 . T . PASS END=182922131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 182922132 . G . PASS END=182922142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 182922143 . G . PASS END=182922144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:13,0 chr1 182922145 . C . PASS END=182922145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 182922146 . C . PASS END=182922147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:13,0 chr1 182922148 . T . PASS END=182922177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:19,0 chr1 182922178 . A . PASS END=182922193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,668:0,60,255:22,0 chr1 182922194 . C . PASS END=182922195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 182922196 . T . PASS END=182922203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 182922204 . C . PASS END=182922204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 182922205 . G . PASS END=182922207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 182922208 . T . PASS END=182922208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 182922209 . G . PASS END=182922220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 182922221 . G . PASS END=182922221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 182922222 . G . PASS END=182922227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:22,0 chr1 182922228 . A . PASS END=182922229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 182922230 . T . PASS END=182922233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 182922234 . T . PASS END=182922268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 182992852 . A . LowGQ END=182992898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,1:2:0:2:0,0,22:0,0,33:3,0 chr1 182992899 . G . PASS END=182992903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 182992904 . G . PASS END=182992911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 182992912 . C . PASS END=182992913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 182992914 . G . PASS END=182992916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 182992917 . C . PASS END=182992917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr1 182992918 . G . PASS END=182992920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 182992921 . C . PASS END=182992922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 182992923 . G . PASS END=182992929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 182992930 . G . PASS END=182992930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 182992931 . C . PASS END=182992947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 182992948 . G . PASS END=182992948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 182992949 . C . PASS END=182992950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 182992951 . C . PASS END=182992951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 182992952 . A . PASS END=182992969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,319:0,30,255:13,0 chr1 182992970 . G . PASS END=182992970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 182992971 . C . PASS END=182992979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 182992980 . G . PASS END=182992980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 182992981 . G . PASS END=182992987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 182992988 . G . PASS END=182992988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 182992989 . G . PASS END=182992989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 182992990 . C . PASS END=182992992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 182992993 . C . LowGQ END=182992993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:12,0 chr1 182992994 . A . PASS END=182992999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 182993000 . G . PASS END=182993000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 182993001 . C . PASS END=182993002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 182993003 . T . PASS END=182993008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 182993009 . A . PASS END=182993009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:13,0 chr1 182993010 . G . PASS END=182993011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 182993012 . T . PASS END=182993012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 182993013 . C . PASS END=182993019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 182993020 . G . PASS END=182993022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 182993023 . G . PASS END=182993023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 182993024 . C . PASS END=182993024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 182993025 . C T, 49.23 PASS DP=14;MQ=250.00;MQRankSum=3.034;ReadPosRankSum=2.001;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,6,0:0.429,0.000:14:5,4,0:3,2,0:48:84,0,50,186,286,472:168,0,255:8,0:4.9234e+01,7.3517e-05,5.3000e+01,1.8585e+02,3.2092e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,4,2:4,4,2,4 chr1 182993026 . T . PASS END=182993031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 182993032 . G . PASS END=182993032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 182993033 . T . PASS END=182993036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 182993037 . T . PASS END=182993037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,371:0,6,255:10,0 chr1 182993038 . G . PASS END=182993042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 182993043 . G . PASS END=182993044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 182993045 . C . PASS END=182993048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 182993049 . C . PASS END=182993049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 182993050 . A . PASS END=182993050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:8,0 chr1 182993051 . A . PASS END=182993054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 182993055 . G . PASS END=182993060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,32,255:12,0 chr1 182993061 . G . PASS END=182993062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 182993063 . C . PASS END=182993077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:19,0 chr1 182993078 . A . PASS END=182993107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,707:0,60,255:25,0 chr1 182993108 . C . PASS END=182993110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 182993111 . A . PASS END=182993112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1015:0,71,255:28,0 chr1 182993113 . T . PASS END=182993115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 182993116 . T . PASS END=182993116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 182993117 . G . PASS END=182993227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1172:0,83,255:35,0 chr1 182993228 . G . PASS END=182993239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:26:0,60,900:0,68,255:25,0 chr1 182993240 . C . PASS END=182993263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,613:0,40,255:19,0 chr1 182993264 . A . PASS END=182993269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,54,255:13,0 chr1 183072463 . G . PASS END=183072480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 183072481 . C . PASS END=183072481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 183072482 . C . PASS END=183072482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 183072483 . T . PASS END=183072515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:29,0 chr1 183072516 . G . PASS END=183072516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 183072517 . A . PASS END=183072518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 183072519 . A . PASS END=183072519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:28,0 chr1 183072520 . G . PASS END=183072538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 183072539 . C . PASS END=183072549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 183072550 . A . PASS END=183072552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 183072553 . G . PASS END=183072557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 183072558 . T . PASS END=183072558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 183072559 . G . PASS END=183072568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 183072569 . C . PASS END=183072571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:23,0 chr1 183072572 . G . PASS END=183072572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 183072573 . T . PASS END=183072584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:71:27:0,71,1080:0,71,255:26,0 chr1 183072585 . T . PASS END=183072586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 183072587 . C . PASS END=183072587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 183072588 . T . PASS END=183072589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183072590 . T C, 49.27 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=3.635;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:8,5,0:7,7,0:48:84,0,50,429,529,958:255,0,255:15,0:4.9275e+01,7.2999e-05,5.3000e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,7,5:7,8,4,8 chr1 183072591 . G . PASS END=183072606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1057:0,84,255:29,0 chr1 183072607 . A . PASS END=183072607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,889:0,70,255:27,0 chr1 183072608 . G . PASS END=183072608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 183072609 . G . PASS END=183072609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 183072610 . C . PASS END=183072612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 183072613 . A . PASS END=183072613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,867:0,62,255:29,0 chr1 183072614 . C . PASS END=183072619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 183072620 . C . PASS END=183072620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 183072621 . T . PASS END=183072626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 183072627 . A . PASS END=183072627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 183072628 . G . PASS END=183072630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 183072631 . C . PASS END=183072641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:30,0 chr1 183072642 . G . PASS END=183072642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:29,0 chr1 183072643 . A . PASS END=183072662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1103:0,90,255:30,0 chr1 183072663 . G . PASS END=183072663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:30,0 chr1 183072664 . A . PASS END=183072667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:30,0 chr1 183072668 . A . PASS END=183072668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 183072669 . T . PASS END=183072698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1093:0,80,255:31,0 chr1 183072699 . A . PASS END=183072699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 183072700 . A . PASS END=183072704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 183072705 . G . PASS END=183072705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 183072706 . C . PASS END=183072713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 183072714 . A . PASS END=183072714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:30,0 chr1 183072715 . C . PASS END=183072720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1218:0,86,255:30,0 chr1 183072721 . A . PASS END=183072721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 183072722 . A . PASS END=183072722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 183072723 . G . PASS END=183072723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr1 183072724 . G . PASS END=183072726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 183072727 . G . PASS END=183072746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:23:0,61,900:0,61,255:26,0 chr1 183072747 . G . PASS END=183072747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 183072748 . A . PASS END=183072751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 183072752 . T . PASS END=183072758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 183072759 . G . PASS END=183072759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:18,0 chr1 183072760 . T . PASS END=183072767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 183077411 . G . PASS END=183077541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:37:0,101,1426:0,101,255:40,0 chr1 183079623 . A . PASS END=183079784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:39:0,81,1215:0,101,255:40,0 chr1 183079785 . C . PASS END=183079789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr1 183083666 . C . PASS END=183083666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 183083667 . C . PASS END=183083668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 183083669 . G . PASS END=183083669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 183083670 . T . PASS END=183083670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:20,0 chr1 183083671 . G . PASS END=183083671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 183083672 . A . PASS END=183083672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr1 183083673 . T . PASS END=183083682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 183083683 . C . PASS END=183083683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 183083684 . G . PASS END=183083693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,845:0,66,255:26,0 chr1 183083694 . A . PASS END=183083695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 183083696 . G . PASS END=183083696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 183083697 . C . PASS END=183083700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183083701 . T . PASS END=183083701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 183083702 . T . PASS END=183083707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 183083708 . C . PASS END=183083708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 183083709 . T . PASS END=183083714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 183083715 . C . PASS END=183083715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:31,0 chr1 183083716 . T . PASS END=183083732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:34:0,86,1202:0,86,255:39,0 chr1 183083733 . T . PASS END=183083733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:39,0 chr1 183083734 . G . PASS END=183083835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:42:0,86,1422:0,86,255:40,0 chr1 183083836 . T . PASS END=183083836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1496:0,79,255:36,0 chr1 183083837 . G . PASS END=183083854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:34:0,81,1215:0,102,255:33,0 chr1 183084655 . G . PASS END=183084657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:25,0 chr1 183084658 . C . PASS END=183084658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 183084659 . T . PASS END=183084659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:28,0 chr1 183084660 . C . PASS END=183084769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:34:0,90,1252:0,94,255:40,0 chr1 183084770 . C . PASS END=183084770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:30,0 chr1 183084771 . A . PASS END=183084772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 183085712 . G . PASS END=183085754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,120,1800:0,128,255:40,0 chr1 183085755 . A G, 44.26 PASS DP=62;MQ=249.43;MQRankSum=5.960;ReadPosRankSum=0.612;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,23,0:0.371,0.000:62:20,9,0:19,14,0:44:79,0,50,815,1358,2173:255,0,255:39,0:4.4264e+01,1.8457e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,17,14,9:21,18,8,15 chr1 183085756 . T . PASS END=183085792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,160,255:40,0 chr1 183085793 . A . PASS END=183085810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,145,255:40,0 chr1 183085902 . A . PASS END=183086038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:32:0,89,1095:0,89,255:40,0 chr1 183086455 . A . PASS END=183086577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:31:0,83,1172:0,83,255:40,0 chr1 183086669 . C . PASS END=183086691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:32:0,86,1194:0,86,255:36,0 chr1 183086692 . T . PASS END=183086692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:34,0 chr1 183086693 . T . PASS END=183086719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1345:0,100,255:39,0 chr1 183086720 . C . PASS END=183086756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,111,1523:0,112,255:40,0 chr1 183086757 . A C, 46.25 PASS DP=43;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=2.447;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,17,0:0.395,0.000:43:10,9,0:16,8,0:45:81,0,50,608,928,1536:255,0,255:24,0:4.6252e+01,1.2477e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,7,10:17,9,9,8 chr1 183086758 . G . PASS END=183086794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:41:0,93,1421:0,93,255:40,0 chr1 183086795 . C . PASS END=183086836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,96,255:40,0 chr1 183086837 . C . PASS END=183086840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,74,255:26,0 chr1 183086841 . T . PASS END=183086841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:23,0 chr1 183086842 . G . PASS END=183086842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 183086843 . T . PASS END=183086843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:23,0 chr1 183086844 . G . PASS END=183086847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:22,0 chr1 183086848 . T . PASS END=183086848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:21,0 chr1 183086849 . A . PASS END=183086858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 183087169 . G . PASS END=183087279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:38:0,87,1305:0,87,255:40,0 chr1 183087280 . A . PASS END=183087281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:34:0,78,1170:0,88,255:26,0 chr1 183090858 . G . PASS END=183090866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 183090867 . A . PASS END=183090867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 183090868 . T . PASS END=183090873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 183090874 . T . PASS END=183090874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 183090875 . G . PASS END=183091052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1096:0,89,255:40,0 chr1 183091053 . A . PASS END=183091075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 183091076 . A . PASS END=183091076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 183091077 . C . PASS END=183091077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 183091078 . A . PASS END=183091078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:20,0 chr1 183091079 . G . PASS END=183091079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 183091198 . G . PASS END=183091198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 183091199 . T . PASS END=183091200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 183091201 . T . PASS END=183091201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 183091202 . T . PASS END=183091286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1225:0,87,255:40,0 chr1 183091287 . T . PASS END=183091287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr1 183091288 . C . PASS END=183091339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,89,255:36,0 chr1 183091340 . C . PASS END=183091346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:28:0,75,1125:0,84,255:26,0 chr1 183091347 . A . PASS END=183091347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:24,0 chr1 183091348 . A . PASS END=183091359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:24,0 chr1 183091360 . G . PASS END=183091360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:21,0 chr1 183091361 . C . PASS END=183091363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 183091364 . C . PASS END=183091372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,50,255:18,0 chr1 183091373 . T . PASS END=183091373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:13,0 chr1 183091374 . A . PASS END=183091382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 183091383 . A . PASS END=183091383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr1 183091384 . C . PASS END=183091386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:17,0 chr1 183093766 . G . PASS END=183093766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 183093767 . T . PASS END=183093770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:26,0 chr1 183093771 . A . PASS END=183093771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,681:0,22,255:24,0 chr1 183093772 . G . PASS END=183093773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,847:0,65,255:27,0 chr1 183093774 . T . PASS END=183093793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1035:0,80,255:36,0 chr1 183093794 . C . PASS END=183093794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:37,0 chr1 183093795 . T . PASS END=183093837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:38:0,111,1665:0,114,255:40,0 chr1 183093838 . G . PASS END=183093874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,124,255:40,0 chr1 183093875 . T C, 45.66 PASS DP=59;MQ=250.00;MQRankSum=6.427;ReadPosRankSum=2.930;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,23,0:0.390,0.000:59:16,12,0:20,11,0:45:80,0,50,794,1271,2065:255,0,255:34,0:4.5663e+01,1.3953e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,15,12,11:15,21,11,12 chr1 183093876 . G . PASS END=183093912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,152,255:40,0 chr1 183093913 . T . PASS END=183094002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1181:0,83,255:40,0 chr1 183094003 . A . PASS END=183094011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 183094532 . C . PASS END=183094535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 183094536 . C . PASS END=183094536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 183094537 . A . PASS END=183094544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1202:0,93,255:32,0 chr1 183094545 . T . PASS END=183094545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr1 183094546 . C . PASS END=183094546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 183094547 . T C, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.960;ReadPosRankSum=1.309;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,17,0:0.500,0.000:34:9,7,0:8,10,0:48:85,0,50,600,606,1206:255,0,255:16,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,8,9:9,8,10,7 chr1 183094548 . G . PASS END=183094584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1227:0,81,255:40,0 chr1 183094585 . G . PASS END=183094685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:32:0,90,1350:0,91,255:40,1 chr1 183095255 . G . PASS END=183095255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 183095256 . T . PASS END=183095271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:30,0 chr1 183095272 . T . PASS END=183095273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 183095274 . G . PASS END=183095277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:31:0,61,1107:0,61,255:30,1 chr1 183095278 . C . PASS END=183095320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1188:0,90,255:39,0 chr1 183095321 . C . PASS END=183095321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr1 183095322 . C . PASS END=183095356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1194:0,83,255:36,0 chr1 183095357 . T . PASS END=183095383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,870:0,62,255:26,0 chr1 183095384 . T . PASS END=183095384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,828:0,28,255:21,0 chr1 183095385 . G . PASS END=183095397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 183096361 . C . PASS END=183096532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1260:0,84,255:40,0 chr1 183096533 . G . PASS END=183096539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr1 183097729 . G . PASS END=183097885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1202:0,86,255:40,0 chr1 183099479 . A . PASS END=183099489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 183099490 . A . PASS END=183099503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:24,0 chr1 183099504 . C . PASS END=183099663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:30:0,87,1014:0,90,255:40,0 chr1 183099664 . A . PASS END=183099684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,92,255:32,0 chr1 183100434 . T . PASS END=183100513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:58:0,120,1800:0,162,255:40,0 chr1 183101535 . T . PASS END=183101648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:42:0,110,1504:0,110,255:40,0 chr1 183101649 . T . PASS END=183101672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,146,255:40,0 chr1 183102541 . G . PASS END=183102553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:25,0 chr1 183102554 . A . PASS END=183102554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 183102555 . A . PASS END=183102557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,946:0,75,255:26,0 chr1 183102558 . A . PASS END=183102558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 183102559 . C . PASS END=183102560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 183102561 . T . PASS END=183102564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183102565 . A . PASS END=183102565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr1 183102566 . C . PASS END=183102566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183102567 . A . PASS END=183102567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 183102568 . G . PASS END=183102569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183102570 . A . PASS END=183102570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 183102571 . T . PASS END=183102580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 183102581 . C . PASS END=183102582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 183102583 . A . PASS END=183102583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,909:0,32,255:25,0 chr1 183102584 . G . PASS END=183102584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 183102585 . C . PASS END=183102588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 183102589 . C . PASS END=183102592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 183102593 . G . PASS END=183102596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 183102597 . A . PASS END=183102598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 183102599 . G . PASS END=183102610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 183102611 . A . PASS END=183102611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,974:0,73,255:26,0 chr1 183102612 . G . PASS END=183102622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1141:0,93,255:31,0 chr1 183102623 . A . PASS END=183102623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 183102624 . A . PASS END=183102624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 183102625 . A . PASS END=183102625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 183102626 . G . PASS END=183102632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 183102633 . A . PASS END=183102633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 183102634 . G . PASS END=183102634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 183102635 . A . PASS END=183102635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:26,0 chr1 183102636 . T . PASS END=183102636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 183102637 . C . PASS END=183102656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:25,0 chr1 183102657 . T . PASS END=183102657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr1 183102658 . G . PASS END=183102663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 183102664 . T . PASS END=183102664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,648:0,49,255:20,0 chr1 183102665 . T . PASS END=183102666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 183102667 . G . PASS END=183102678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:19,0 chr1 183102679 . A . PASS END=183102679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr1 183102680 . C . PASS END=183102680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 183102681 . T . PASS END=183102681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr1 183102682 . G . PASS END=183102682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 183102683 . G . PASS END=183102683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 183102684 . A . PASS END=183102685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 183103795 . A . PASS END=183103895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,165,255:40,0 chr1 183103896 . G . PASS END=183103896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,10:66:31:66:0,31,1589:0,31,255:40,0 chr1 183103897 . G . LowGQ END=183103897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,11:65:0:65:0,0,1427:11,0,255:40,0 chr1 183103898 . A . PASS END=183103944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:49:0,112,1800:0,112,255:40,0 chr1 183104177 . A . PASS END=183104291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,105,1552:0,116,255:40,0 chr1 183105521 . A . PASS END=183105527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:28,0 chr1 183105528 . T . PASS END=183105528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 183105529 . A . PASS END=183105533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 183105534 . T C, 49.67 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=1.813;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,15,0:0.469,0.000:32:7,7,0:10,8,0:48:84,0,50,499,608,1107:255,0,255:17,0:4.9673e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,7,8:7,10,7,8 chr1 183105535 . G . PASS END=183105571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1156:0,83,255:40,0 chr1 183105572 . G . PASS END=183105653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1215:0,96,255:40,0 chr1 183105654 . G . PASS END=183105661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 183105662 . C . PASS END=183105667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 183105668 . A . PASS END=183105686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,67,255:25,0 chr1 183105687 . T . PASS END=183105704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 183105705 . G A, 49.84 PASS DP=19;MQ=249.18;MQRankSum=2.817;ReadPosRankSum=1.919;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:5,2,0:5,7,0:48:85,0,50,293,352,645:255,0,255:8,0:4.9839e+01,6.6786e-05,5.3000e+01,2.9296e+02,3.8662e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,4,5:5,5,5,4 chr1 183105706 . A . PASS END=183105710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 183105711 . T . PASS END=183105720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:12,0 chr1 183106804 . A . PASS END=183106962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:36:0,87,1357:0,87,255:40,0 chr1 183109539 . G . PASS END=183109638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1260:0,98,255:40,0 chr1 183111669 . G . PASS END=183111925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:31:0,87,1291:0,87,255:40,0 chr1 183155211 . G . PASS END=183155211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 183155226 . T . PASS END=183155226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 183155232 . G . PASS END=183155232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 183155348 . T . PASS END=183155348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 183155409 . G . PASS END=183155409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 183155449 . C . PASS END=183155449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 183155473 . C . PASS END=183155473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 183155488 . A . PASS END=183155489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:24:0,42,829:0,42,255:22,0 chr1 183155490 . G . PASS END=183155500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,976:0,65,255:26,0 chr1 183155501 . G . PASS END=183155504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 183155505 . G . PASS END=183155505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 183155506 . G . PASS END=183155514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:29,0 chr1 183155515 . C . PASS END=183155515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 183155516 . T . PASS END=183155555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1109:0,87,255:31,0 chr1 183155556 . C . PASS END=183155566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,995:0,71,255:26,0 chr1 183177010 . C . PASS END=183177010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 183177014 . A . LowGQ END=183177014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,676:19,0,255:22,0 chr1 183177016 . T . PASS END=183177016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:29:30:0,29,955:0,29,255:28,0 chr1 183177017 . C . PASS END=183177018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:54:29:0,54,947:0,54,255:28,0 chr1 183177019 . G . PASS END=183177019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,870:0,32,255:27,0 chr1 183177020 . T . PASS END=183177020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 183177021 . G . PASS END=183177021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,886:0,32,255:27,0 chr1 183177022 . A . PASS END=183177022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,904:0,15,255:26,0 chr1 183177023 . T . PASS END=183177025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1117:0,80,255:31,0 chr1 183177026 . C . PASS END=183177026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr1 183177027 . A . PASS END=183177028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:30,0 chr1 183177029 . T . PASS END=183177029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:30,0 chr1 183177030 . G . PASS END=183177030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:30,0 chr1 183177031 . G . PASS END=183177032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:31,0 chr1 183177033 . A . PASS END=183177033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 183177034 . A . PASS END=183177034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 183177035 . G . PASS END=183177035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:34,0 chr1 183177036 . T . PASS END=183177036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1272:0,92,255:34,0 chr1 183177037 . C . PASS END=183177037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:33,0 chr1 183177038 . C . PASS END=183177040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1235:0,88,255:33,0 chr1 183177041 . G . PASS END=183177041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1221:0,77,255:32,0 chr1 183177042 . C . PASS END=183177043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1286:0,92,255:33,0 chr1 183177044 . G . PASS END=183177044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1357:0,59,255:36,0 chr1 183177045 . T . PASS END=183177046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1458:0,107,255:37,0 chr1 183177047 . T . PASS END=183177047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:29:41:0,29,1319:0,29,255:36,0 chr1 183177048 . A . PASS END=183177048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1460:0,87,255:38,0 chr1 183177049 . T . PASS END=183177049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:51:43:0,51,1369:0,51,255:38,0 chr1 183177050 . C . PASS END=183177050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1443:0,93,255:38,0 chr1 183177051 . T . PASS END=183177051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1392:0,54,255:37,0 chr1 183177052 . T . PASS END=183177053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1535:0,110,255:38,0 chr1 183177054 . G . PASS END=183177054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1404:0,76,255:38,0 chr1 183177055 . A . PASS END=183177138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:38:0,83,1183:0,83,255:40,0 chr1 183177139 . G . PASS END=183177139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1340:0,67,255:32,0 chr1 183177140 . C . PASS END=183177170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1140:0,83,255:35,0 chr1 183177171 . G . PASS END=183177199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,767:0,66,255:27,0 chr1 183177200 . C . PASS END=183177200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 183177201 . A . PASS END=183177205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 183184588 . G . PASS END=183184615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1174:0,85,255:40,0 chr1 183184616 . C T, 47.11 PASS DP=49;MQ=249.66;MQRankSum=5.889;ReadPosRankSum=2.370;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,20,0:0.408,0.000:49:14,11,0:15,9,0:46:82,0,50,699,1037,1737:255,0,255:27,0:4.7113e+01,1.0613e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,12,8:15,14,11,9 chr1 183184617 . G . PASS END=183184689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,124,255:40,0 chr1 183184690 . C T, 50.00 PASS DP=53;MQ=249.42;MQRankSum=6.135;ReadPosRankSum=2.579;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,29,0:0.558,0.000:52:9,13,0:14,16,0:47:85,0,46,185,185,185:255,0,255:21,0:5.0000e+01,9.5261e-05,4.9229e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,16,13,16:13,10,15,14 chr1 183184691 . G . PASS END=183184723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:38:0,90,1350:0,104,255:40,0 chr1 183187523 . A . PASS END=183187531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 183187532 . A . PASS END=183187544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 183187545 . A . PASS END=183187545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 183187546 . C . PASS END=183187564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 183187565 . C . PASS END=183187565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 183187566 . C . PASS END=183187586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 183187587 . T . PASS END=183187587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 183187588 . C . PASS END=183187594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 183187595 . C . PASS END=183187595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 183187596 . C . PASS END=183187602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 183187603 . C T, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.204;ReadPosRankSum=3.204;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:4,3,0:3,4,0:48:85,0,50,250,250,501:229,0,229:7,0:5.0000e+01,6.5233e-05,5.3000e+01,2.5025e+02,2.8511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,2,5:3,4,6,1 chr1 183187604 . A . PASS END=183187611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183187612 . A . PASS END=183187612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 183187613 . C . PASS END=183187624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 183187629 . T . PASS END=183187629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 183187637 . G . PASS END=183187637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 183189958 . A . PASS END=183189958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 183189960 . G . PASS END=183189963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 183189964 . C . PASS END=183189964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 183189965 . G . PASS END=183189969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,963:0,78,255:26,0 chr1 183189970 . G . PASS END=183189976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:32,0 chr1 183189977 . A . PASS END=183189977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 183189978 . T . PASS END=183189992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:33,0 chr1 183189993 . G . PASS END=183189993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr1 183189994 . A . PASS END=183190077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1186:0,83,255:40,0 chr1 183190078 . A . PASS END=183190096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:26:0,64,939:0,64,255:27,0 chr1 183190098 . T . PASS END=183190098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:24,0 chr1 183191222 . A . PASS END=183191222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 183191224 . A . PASS END=183191334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1034:0,90,255:40,0 chr1 183191335 . T . PASS END=183191335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:26,0 chr1 183191336 . T . PASS END=183191340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 183191341 . C . PASS END=183191341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 183191342 . T . PASS END=183191343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 183191344 . C . PASS END=183191346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 183192270 . C . PASS END=183192277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 183192278 . C . PASS END=183192278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 183192279 . T . PASS END=183192279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,541:0,45,255:15,0 chr1 183192280 . T . PASS END=183192280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 183192281 . G . PASS END=183192291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:19,0 chr1 183192292 . G . PASS END=183192303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 183192304 . T G, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.940;ReadPosRankSum=2.561;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,11,0:0.500,0.000:22:5,5,0:6,6,0:47:85,0,47,185,185,185:255,0,255:10,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,4,4,7:9,2,2,9 chr1 183192305 . C . PASS END=183192309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 183192310 . C . PASS END=183192310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,743:0,14,255:19,0 chr1 183192311 . C . PASS END=183192324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,931:0,66,255:26,0 chr1 183192325 . C . PASS END=183192341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1008:0,81,255:33,0 chr1 183192342 . G . PASS END=183192344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 183192345 . G . PASS END=183192345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 183192346 . A . PASS END=183192424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,88,255:36,0 chr1 183192425 . C . PASS END=183192442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,900:0,63,255:25,0 chr1 183192443 . A . PASS END=183192458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,676:0,50,255:18,0 chr1 183192459 . G . PASS END=183192459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:15,0 chr1 183192460 . G . PASS END=183192460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 183194728 . T . PASS END=183194728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 183194741 . A . PASS END=183194835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:39:0,87,1305:0,93,255:40,0 chr1 183194836 . A . PASS END=183194848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:29:0,63,945:0,83,255:26,0 chr1 183194849 . G . PASS END=183194856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:23:0,51,765:0,69,255:18,0 chr1 183195832 . G . PASS END=183195955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1213:0,81,255:40,0 chr1 183195956 . C . PASS END=183195956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:30,0 chr1 183195957 . T . PASS END=183195962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,86,255:29,0 chr1 183195963 . C . PASS END=183195963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:27,0 chr1 183195964 . T . PASS END=183195969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:29,0 chr1 183195970 . A . PASS END=183195970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr1 183195971 . G . PASS END=183195971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 183195972 . A . PASS END=183195972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,917:0,35,255:26,0 chr1 183195973 . G . PASS END=183195974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 183195975 . T . PASS END=183195975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 183195976 . T . PASS END=183195976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 183195977 . C . PASS END=183195978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 183195979 . G . PASS END=183195981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 183195982 . A . PASS END=183195982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 183195983 . G . PASS END=183195993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr1 183195994 . T . PASS END=183195994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 183195995 . T . PASS END=183195997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 183195998 . G . PASS END=183196015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,990:0,72,255:26,0 chr1 183196016 . A . PASS END=183196016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 183196017 . C . PASS END=183196020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 183196021 . C . PASS END=183196022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 183196023 . A . PASS END=183196027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 183196028 . G . PASS END=183196028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 183196029 . A . PASS END=183196033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 183196034 . C . PASS END=183196047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,60,255:19,0 chr1 183196048 . A . PASS END=183196051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 183196646 . C . PASS END=183196646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 183196650 . G . PASS END=183196659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,825:0,61,255:26,0 chr1 183196660 . T . PASS END=183196670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:30,0 chr1 183196671 . A . PASS END=183196671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 183196672 . G . PASS END=183196674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1062:0,90,255:30,0 chr1 183196675 . T . PASS END=183196675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 183196676 . C . PASS END=183196676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 183196677 . C . PASS END=183196677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 183196678 . T . PASS END=183196833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,1133:0,90,255:40,0 chr1 183197509 . G . PASS END=183197517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,676:0,43,255:19,0 chr1 183197518 . G . PASS END=183197518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 183197519 . T . PASS END=183197519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 183197520 . G . PASS END=183197520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 183197521 . A . PASS END=183197521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 183197522 . G . PASS END=183197523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 183197524 . T . PASS END=183197524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr1 183197525 . C . PASS END=183197554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,739:0,63,255:23,0 chr1 183197555 . T . PASS END=183197555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:20,0 chr1 183197556 . G . PASS END=183197560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,884:0,61,255:21,0 chr1 183197561 . A . PASS END=183197561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,847:0,48,255:21,0 chr1 183197562 . C . PASS END=183197583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 183197584 . A . PASS END=183197585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,814:0,53,255:21,0 chr1 183197586 . C . PASS END=183197590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 183197591 . T . PASS END=183197596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,828:0,53,255:19,0 chr1 183197597 . C . PASS END=183197604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 183197605 . A . PASS END=183197605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr1 183197606 . T . PASS END=183197612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 183197613 . C . PASS END=183197615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,837:0,56,255:23,0 chr1 183197616 . A . PASS END=183197624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 183197625 . G . PASS END=183197625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 183197626 . G . PASS END=183197628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 183197629 . A . PASS END=183197629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:21,0 chr1 183197630 . T . PASS END=183197630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 183197631 . T . PASS END=183197633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 183197634 . G . PASS END=183197649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr1 183197650 . G . PASS END=183197652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,812:0,41,255:23,0 chr1 183197653 . G . PASS END=183197653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 183197654 . T . PASS END=183197655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:22,0 chr1 183197656 . T . PASS END=183197656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 183197657 . G . PASS END=183197657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 183197658 . A . PASS END=183197659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 183197660 . G . PASS END=183197663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,784:0,55,255:19,0 chr1 183197664 . A . PASS END=183197696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,825:0,62,255:24,0 chr1 183197697 . T . PASS END=183197752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,576:0,44,255:19,0 chr1 183197753 . A . PASS END=183197754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 183197756 . T . PASS END=183197756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 183200095 . G . PASS END=183200238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:34:0,92,1227:0,92,255:40,0 chr1 183201321 . G . PASS END=183201321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 183201322 . A . PASS END=183201323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 183201324 . G . PASS END=183201324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 183201325 . G . PASS END=183201326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 183201327 . T . PASS END=183201327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 183201328 . C . PASS END=183201329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:17,0 chr1 183201330 . G . PASS END=183201346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,679:0,63,255:23,0 chr1 183201347 . A . PASS END=183201347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 183201348 . G . PASS END=183201353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 183201354 . G . PASS END=183201354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 183201355 . G . PASS END=183201364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:26,0 chr1 183201365 . T . PASS END=183201438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,964:0,81,255:34,0 chr1 183201439 . G . PASS END=183201479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:26,0 chr1 183201490 . C . PASS END=183201490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 183201787 . G . PASS END=183201819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr1 183201820 . A . PASS END=183201846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,695:0,63,255:22,0 chr1 183201847 . A . PASS END=183201847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 183201848 . G . PASS END=183201851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 183201852 . C . PASS END=183201852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 183201853 . G . PASS END=183201856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 183201857 . G . PASS END=183201857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 183201858 . G . PASS END=183201859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 183201860 . T . PASS END=183201860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:20,0 chr1 183201861 . G . PASS END=183201915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,779:0,61,255:25,0 chr1 183201916 . G . PASS END=183201917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 183201918 . G . PASS END=183201918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 183201919 . T . PASS END=183201920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 183201921 . C . PASS END=183201924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 183201925 . A . PASS END=183201932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr1 183201933 . A . PASS END=183201950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 183201951 . C . PASS END=183201951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:15,0 chr1 183201952 . A . PASS END=183201969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 183201970 . G C, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=3.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,9,0:0.562,0.000:16:4,2,0:3,7,0:48:85,0,49,322,242,564:255,0,215:7,0:5.0000e+01,6.8081e-05,5.2453e+01,3.2196e+02,2.7710e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,3,6:5,2,6,3 chr1 183201971 . T . PASS END=183201992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 183201994 . T . PASS END=183201994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 183203501 . G . PASS END=183203505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 183203506 . T . PASS END=183203519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:30,0 chr1 183203520 . C . PASS END=183203520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 183203521 . A . PASS END=183203581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1150:0,83,255:34,0 chr1 183204710 . C . PASS END=183204714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1210:0,90,255:32,0 chr1 183204715 . T . PASS END=183204716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1044:0,65,255:31,0 chr1 183204717 . G . PASS END=183204738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1169:0,80,255:39,0 chr1 183204739 . A . PASS END=183204739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:38,0 chr1 183204740 . A . PASS END=183204835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1271:0,89,255:40,0 chr1 183204836 . C . PASS END=183204852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:26:0,60,900:0,78,255:26,0 chr1 183204853 . G . PASS END=183204863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:20:0,57,855:0,60,255:19,0 chr1 183204864 . A . PASS END=183204866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 183204880 . G . PASS END=183204880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 183205595 . A . PASS END=183205595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1283:0,108,255:36,0 chr1 183205596 . T . PASS END=183205596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1037:0,74,255:34,0 chr1 183205597 . T . PASS END=183205601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1155:0,94,255:38,0 chr1 183205602 . A . PASS END=183205602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1138:0,66,255:36,0 chr1 183205603 . A . PASS END=183205739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:85:36:0,85,1379:0,85,255:40,1 chr1 183206486 . G . PASS END=183206535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1142:0,88,255:40,0 chr1 183206536 . T . PASS END=183206572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,105,1582:0,105,255:40,0 chr1 183206573 . G A, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.699;ReadPosRankSum=3.278;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,25,0:0.556,0.000:45:12,11,0:8,14,0:48:85,0,49,886,671,1557:255,0,255:19,0:5.0000e+01,7.1964e-05,5.1828e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,13,15,10:9,11,13,12 chr1 183206574 . A . PASS END=183206610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1305:0,98,255:40,0 chr1 183206611 . T . PASS END=183206619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1095:0,80,255:29,0 chr1 183206620 . A . PASS END=183206620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:28,0 chr1 183206621 . T . PASS END=183206622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 183206623 . G . PASS END=183206623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 183206624 . A . PASS END=183206625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 183206626 . A . PASS END=183206626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 183206627 . A . PASS END=183206629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 183206630 . T . PASS END=183206639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,64,255:23,0 chr1 183207440 . A . PASS END=183207440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 183207442 . A . PASS END=183207556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:41:0,96,1362:0,107,255:40,0 chr1 183208499 . A . PASS END=183208500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 183208501 . T . PASS END=183208501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,769:0,64,255:26,0 chr1 183208502 . T . PASS END=183208507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,978:0,81,255:33,0 chr1 183208508 . T . PASS END=183208508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:32,0 chr1 183208509 . G . PASS END=183208650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1162:0,83,255:40,0 chr1 183208651 . A . PASS END=183208654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,88,255:26,0 chr1 183208655 . A . PASS END=183208659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 183208660 . G . PASS END=183208672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,80,255:25,0 chr1 183208673 . T . PASS END=183208673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 183208674 . G . PASS END=183208678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 183208679 . T . PASS END=183208679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:21,0 chr1 183208680 . C . PASS END=183208694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 183208695 . A . PASS END=183208699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,56,255:21,0 chr1 183209175 . G . PASS END=183209175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1264:0,102,255:34,0 chr1 183209176 . A . PASS END=183209176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1093:0,69,255:31,0 chr1 183209177 . G . PASS END=183209333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,104,1405:0,104,255:40,0 chr1 183209427 . G . PASS END=183209534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:49:0,105,1575:0,131,255:40,0 chr1 183212280 . A . PASS END=183212280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 183212282 . A . PASS END=183212293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,336:0,33,255:12,0 chr1 183212294 . G . PASS END=183212312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr1 183212313 . G . PASS END=183212373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,664:0,63,255:26,0 chr1 183212374 . A . PASS END=183212374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 183212375 . T . PASS END=183212395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr1 183212396 . G . PASS END=183212396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183212397 . G . PASS END=183212401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1078:0,74,255:26,0 chr1 183212402 . G . PASS END=183212409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 183212410 . A . PASS END=183212410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 183212411 . G . PASS END=183212415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183212416 . C . PASS END=183212420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr1 183212421 . C . PASS END=183212423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183212424 . T . PASS END=183212424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 183212425 . T . PASS END=183212430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr1 183212431 . G . PASS END=183212450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr1 183212451 . T . PASS END=183212451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:24,0 chr1 183212452 . C . PASS END=183212479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 183212480 . T . PASS END=183212480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr1 183212481 . T . PASS END=183212481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:22,0 chr1 183212482 . A . PASS END=183212482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:22,0 chr1 183212483 . G . PASS END=183212491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,861:0,61,255:24,0 chr1 183212492 . T . PASS END=183212492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:20,0 chr1 183212493 . G . PASS END=183212500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 183212501 . G . PASS END=183212501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,837:0,23,255:21,0 chr1 183212502 . C . PASS END=183212503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 183212504 . G . PASS END=183212510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 183212511 . T . PASS END=183212533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,546:0,40,255:18,0 chr1 183212534 . G . PASS END=183212535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 183212735 . G . PASS END=183212735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 183212810 . A . PASS END=183212810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:32,0 chr1 183212832 . C . PASS END=183212832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 183212935 . T . PASS END=183212935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 183212940 . C . PASS END=183212940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 183213128 . A . PASS END=183213128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 183213165 . C . PASS END=183213165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 183213351 . A . PASS END=183213351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 183213381 . T . PASS END=183213381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,181,255:40,0 chr1 183213511 . C . PASS END=183213511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 183213521 . T . PASS END=183213521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 183213543 . C . PASS END=183213543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 183213556 . C . PASS END=183213556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 183213566 . A . PASS END=183213566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 183213567 . C . PASS END=183213567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 183213588 . C . PASS END=183213588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 183213594 . G . PASS END=183213594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 183213601 . G . PASS END=183213602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:17,0 chr1 183213673 . T . PASS END=183213674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 183213734 . G . PASS END=183213734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 183213779 . C . PASS END=183213779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 183213800 . G . PASS END=183213800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 183213933 . C . PASS END=183213933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 183213991 . T . PASS END=183213991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,117,1755:0,138,255:39,0 chr1 183214017 . A . PASS END=183214017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1388:0,101,255:36,0 chr1 183214152 . A . PASS END=183214152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 183214172 . G . PASS END=183214172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 183214182 . A . PASS END=183214182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,184,255:40,0 chr1 183214185 . A . PASS END=183214185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 183214209 . T . PASS END=183214209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr1 183214221 . G . PASS END=183214221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 183214235 . G . PASS END=183214235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr1 183221776 . C . PASS END=183221776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 183221777 . T . PASS END=183221785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 183221786 . G . PASS END=183221851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1058:0,89,255:37,0 chr1 183221852 . T . PASS END=183221852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr1 183221853 . G . PASS END=183221861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:30,0 chr1 183221862 . C . PASS END=183221863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 183221864 . T . PASS END=183221864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 183221865 . G . PASS END=183221878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,922:0,62,255:26,0 chr1 183230137 . C . PASS END=183230204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,102,1530:0,119,255:40,0 chr1 183230337 . T . PASS END=183230438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,106,1407:0,106,255:40,0 chr1 183247688 . A . PASS END=183247764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,104,1451:0,104,255:40,0 chr1 183253130 . C . PASS END=183253174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,111,1693:0,111,255:40,0 chr1 183253845 . C . PASS END=183253921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1197:0,92,255:38,0 chr1 183253922 . T . PASS END=183253925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 183255797 . C . PASS END=183255923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:53:0,117,1755:0,143,255:40,0 chr1 183259263 . C . PASS END=183259263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1092:0,87,255:29,0 chr1 183259264 . T . PASS END=183259264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 183259265 . T . PASS END=183259267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 183259268 . T . PASS END=183259269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 183259270 . A . PASS END=183259337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1139:0,80,255:36,0 chr1 183259338 . C . PASS END=183259341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:24,0 chr1 183261925 . C . PASS END=183261944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:35,0 chr1 183261945 . G . PASS END=183261945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr1 183261946 . A . PASS END=183261954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1266:0,102,255:34,0 chr1 183261955 . T . PASS END=183261955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:31,0 chr1 183261956 . G . PASS END=183261960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1294:0,89,255:33,0 chr1 183261961 . A . PASS END=183261962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1151:0,63,255:31,0 chr1 183261963 . G . PASS END=183261984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:33,0 chr1 183261985 . A . PASS END=183261985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:27,0 chr1 183261986 . C . PASS END=183261992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 183262840 . C . PASS END=183262928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:48:0,120,1800:0,144,255:40,0 chr1 183273805 . C . PASS END=183273874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:41:0,110,1482:0,110,255:40,0 chr1 183387318 . C . PASS END=183387323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,125,255:40,0 chr1 183387324 . T . PASS END=183387324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:75:51:0,75,1679:0,75,255:40,0 chr1 183387325 . C . PASS END=183387402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,115,1755:0,115,255:40,0 chr1 183441756 . A . PASS END=183441758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 183441759 . A . PASS END=183441767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1201:0,86,255:32,0 chr1 183441768 . A . PASS END=183441768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:31,0 chr1 183441769 . G . PASS END=183441772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1174:0,96,255:32,0 chr1 183441773 . G . PASS END=183441773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 183441774 . C . PASS END=183441780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1101:0,82,255:33,0 chr1 183441781 . T . PASS END=183441781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:31,0 chr1 183441782 . C . PASS END=183441784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 183471411 . A . PASS END=183471526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:63:0,120,1800:0,173,255:40,1 chr1 183481972 . G . PASS END=183481996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,3:109:99:105:0,120,1800:0,185,255:40,0 chr1 183481997 . A . PASS END=183482003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:109:0,120,1800:0,191,255:40,0 chr1 183485009 . A . PASS END=183485044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr1 183485045 . G . PASS END=183485045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 183485046 . G . PASS END=183485049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 183485050 . G . PASS END=183485052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 183485053 . C . PASS END=183485056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 183485057 . A . PASS END=183485060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 183485061 . C . PASS END=183485083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:28:0,80,993:0,80,255:28,0 chr1 183485084 . C . PASS END=183485108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 183485109 . G . PASS END=183485116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 183485117 . A . PASS END=183485118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 183485119 . C . PASS END=183485126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 183486761 . G . PASS END=183486800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:57:0,120,1800:0,148,255:40,0 chr1 183486823 . C . PASS END=183486858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,180,255:40,0 chr1 183486859 . G A, 48.29 PASS DP=91;MQ=250.00;MQRankSum=8.128;ReadPosRankSum=3.244;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,39,0:0.429,0.000:91:24,13,0:28,26,0:47:83,0,50,1363,1793,3156:255,0,255:40,0:4.8290e+01,8.6201e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,24,18,21:24,28,18,21 chr1 183486860 . C . PASS END=183486896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:83:0,120,1800:0,220,255:40,0 chr1 183486897 . G . PASS END=183486955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,120,1800:0,174,255:40,0 chr1 183495731 . T . PASS END=183495884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:37:0,87,1305:0,111,255:40,0 chr1 183495885 . T . PASS END=183495902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:26,0 chr1 183496761 . T . PASS END=183496764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr1 183496765 . A . PASS END=183496766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 183496767 . A . PASS END=183496771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:32,0 chr1 183496772 . T . PASS END=183496772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:31,0 chr1 183496773 . C . PASS END=183496805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:35,0 chr1 183496806 . G . PASS END=183496812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:26,0 chr1 183496813 . C . PASS END=183496828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 183496829 . T . PASS END=183496831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 183497091 . C . PASS END=183497093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1311:0,105,255:35,0 chr1 183497094 . G . PASS END=183497094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 183497095 . A . PASS END=183497110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1182:0,105,255:36,0 chr1 183497111 . A . PASS END=183497111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1263:0,53,255:33,0 chr1 183497112 . G . PASS END=183497154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:38,0 chr1 183497155 . C . PASS END=183497162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,901:0,67,255:26,0 chr1 183498027 . G . PASS END=183498173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:35:0,81,1215:0,84,255:40,0 chr1 183498174 . A . PASS END=183498177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:35:0,69,1035:0,89,255:25,0 chr1 183498533 . C . PASS END=183498637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:36:0,94,1351:0,94,255:40,0 chr1 183498638 . T . PASS END=183498638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1254:0,78,255:31,0 chr1 183498639 . C . PASS END=183498656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1227:0,88,255:34,0 chr1 183498657 . G . PASS END=183498657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:31,0 chr1 183498658 . A . PASS END=183498668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1000:0,83,255:33,0 chr1 183502299 . A . PASS END=183502461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:36:0,81,1215:0,85,255:40,0 chr1 183502811 . T . PASS END=183502815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr1 183502816 . T . PASS END=183502819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,906:0,84,255:30,0 chr1 183502820 . T . PASS END=183502820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 183502821 . T . PASS END=183502937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1094:0,83,255:40,0 chr1 183502938 . T . PASS END=183502938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:28,0 chr1 183502939 . C . PASS END=183502941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1208:0,83,255:28,0 chr1 183502942 . G . PASS END=183502942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 183502943 . A . PASS END=183502945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 183502946 . C . PASS END=183502967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 183506280 . C . PASS END=183506350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,153,255:40,0 chr1 183507515 . C . PASS END=183507575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,157,255:40,0 chr1 183510119 . G . PASS END=183510128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 183510129 . T . PASS END=183510130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 183510131 . T . PASS END=183510238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:34:0,86,1233:0,86,255:40,0 chr1 183511211 . G . PASS END=183511213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:34,0 chr1 183511214 . G . PASS END=183511214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:32,0 chr1 183511215 . A . PASS END=183511347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:34:0,102,1250:0,102,255:40,0 chr1 183511348 . A . PASS END=183511348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:51:55:0,51,1517:0,51,255:40,0 chr1 183511349 . T . PASS END=183511367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:51:0,89,1519:0,89,255:40,0 chr1 183511368 . T . PASS END=183511368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:51:54:0,51,1613:0,51,255:40,0 chr1 183511369 . C . PASS END=183511375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,108,1618:0,108,255:40,0 chr1 183511376 . A . PASS END=183511376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1652:0,78,255:40,0 chr1 183511377 . T . PASS END=183511637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:45:0,99,1373:0,99,255:40,0 chr1 183513488 . G . PASS END=183513618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:84:43:0,84,1260:0,109,255:40,0 chr1 183513619 . T . PASS END=183513632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:65:27:0,65,984:0,65,255:26,0 chr1 183514065 . G . PASS END=183514065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183514066 . G . PASS END=183514067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 183514068 . T . PASS END=183514073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 183514074 . C . PASS END=183514074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 183514075 . C . PASS END=183514075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 183514076 . C . PASS END=183514077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:18,0 chr1 183514078 . A . PASS END=183514078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,505:0,24,255:17,0 chr1 183514079 . A . PASS END=183514083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:19:0,46,595:0,46,255:20,0 chr1 183514084 . T . PASS END=183514101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 183514102 . G . PASS END=183514103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 183514104 . C . PASS END=183514105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 183514106 . T . PASS END=183514106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 183514107 . T . PASS END=183514108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 183514109 . T . PASS END=183514109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 183514110 . C . PASS END=183514118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 183514119 . C . PASS END=183514119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 183514120 . A . PASS END=183514131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,65,255:26,0 chr1 183514132 . C . PASS END=183514148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr1 183514149 . T . PASS END=183514149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 183514150 . C . PASS END=183514156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 183514157 . A . PASS END=183514157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 183514158 . C . PASS END=183514176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:31,0 chr1 183514177 . T . PASS END=183514180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 183514181 . T . PASS END=183514181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,967:0,54,255:25,0 chr1 183514182 . C . PASS END=183514183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 183514184 . C . PASS END=183514184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:26,0 chr1 183514185 . C . PASS END=183514185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr1 183514186 . A . PASS END=183514187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 183514188 . C . PASS END=183514188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 183514189 . A . PASS END=183514196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1061:0,71,255:27,0 chr1 183514197 . A . PASS END=183514197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 183514198 . G . PASS END=183514198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 183514199 . G . PASS END=183514203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 183514204 . A . PASS END=183514205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 183514206 . C . PASS END=183514206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 183514207 . T . PASS END=183514207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:30,0 chr1 183514208 . G . PASS END=183514363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1164:0,82,255:40,0 chr1 183514364 . G . PASS END=183514364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1172:0,71,255:28,0 chr1 183514365 . C . PASS END=183514365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 183514366 . T . PASS END=183514367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:27,0 chr1 183514368 . T . PASS END=183514376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 183514377 . A . PASS END=183514379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 183514380 . A . PASS END=183514380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:22,0 chr1 183514381 . A . PASS END=183514381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:23,0 chr1 183514382 . C . PASS END=183514382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:22,0 chr1 183514383 . A . PASS END=183514406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,61,255:24,0 chr1 183514407 . C . PASS END=183514407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 183514408 . T . PASS END=183514410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 183514411 . G . PASS END=183514423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:18,0 chr1 183514424 . C . PASS END=183514424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 183514425 . C . PASS END=183514429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 183514430 . C . PASS END=183514441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,480:0,39,255:13,0 chr1 183514442 . C . PASS END=183514442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 183514443 . A . PASS END=183514443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:13,0 chr1 183514444 . G . PASS END=183514444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 183514445 . C . PASS END=183514445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183514446 . A . PASS END=183514446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 183514447 . G . PASS END=183514447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 183515101 . T . PASS END=183515101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 183515102 . A . PASS END=183515102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 183515103 . T . PASS END=183515116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,860:0,69,255:25,0 chr1 183515117 . C . PASS END=183515118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183515119 . T . PASS END=183515119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 183515120 . C . PASS END=183515122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183515123 . A . PASS END=183515126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,986:0,67,255:27,0 chr1 183515127 . G . PASS END=183515127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 183515128 . C . PASS END=183515128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr1 183515129 . T . PASS END=183515427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1194:0,87,255:40,0 chr1 183515428 . G . PASS END=183515443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:26:0,64,891:0,64,255:25,0 chr1 183515444 . A . PASS END=183515444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:23,0 chr1 183515445 . G . PASS END=183515446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:23,0 chr1 183515447 . A . PASS END=183515447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:22,0 chr1 183515448 . T . PASS END=183515450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 183515451 . T . PASS END=183515451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:22,0 chr1 183515452 . G . PASS END=183515457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:25,0 chr1 183515458 . A . PASS END=183515458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 183515459 . G . PASS END=183515459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 183515460 . A . PASS END=183515460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 183515461 . A . PASS END=183515462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 183515463 . G . PASS END=183515463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 183515464 . C . PASS END=183515468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,74,255:23,0 chr1 183515469 . T . PASS END=183515470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:22,0 chr1 183515471 . A . PASS END=183515472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 183516238 . G . PASS END=183516240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:26,0 chr1 183516241 . C . PASS END=183516245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 183516246 . G . PASS END=183516246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 183516247 . A . PASS END=183516249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 183516250 . T . PASS END=183516250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 183516251 . C . PASS END=183516254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 183516255 . T . PASS END=183516255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:28,0 chr1 183516256 . C . PASS END=183516256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 183516257 . T . PASS END=183516257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 183516258 . G . PASS END=183516378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,89,255:40,0 chr1 183516379 . A . PASS END=183516387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,70,255:26,0 chr1 183518343 . A . PASS END=183518423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:44:0,94,1370:0,94,255:40,0 chr1 183518899 . G . PASS END=183519042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:31:0,81,1073:0,93,255:40,0 chr1 183519043 . C . PASS END=183519054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:26,0 chr1 183519055 . T . PASS END=183519058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:19,0 chr1 183519886 . A . PASS END=183519886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 183519887 . T . PASS END=183519893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,947:0,69,255:26,0 chr1 183519894 . A . PASS END=183519897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 183519898 . C . PASS END=183519898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 183519899 . A . PASS END=183519911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,979:0,81,255:29,0 chr1 183519912 . C . PASS END=183519912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1044:0,65,255:30,0 chr1 183519913 . C . PASS END=183520016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:32:0,80,1133:0,80,255:40,0 chr1 183520017 . G . PASS END=183520027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:26,0 chr1 183520028 . T . PASS END=183520028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:22,0 chr1 183520029 . G . PASS END=183520033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 183520034 . T . PASS END=183520035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:23,0 chr1 183520036 . G . PASS END=183520037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,841:0,39,255:23,0 chr1 183520038 . T . PASS END=183520038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 183520039 . G . PASS END=183520043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:23,0 chr1 183520044 . A . PASS END=183520044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 183520045 . C . PASS END=183520046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:23,0 chr1 183520047 . G . PASS END=183520048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 183520049 . T . PASS END=183520052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:21,0 chr1 183520053 . C . PASS END=183520055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 183520056 . G . PASS END=183520056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr1 183520180 . C . PASS END=183520201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:30:0,86,1141:0,86,255:40,0 chr1 183520202 . T . PASS END=183520202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1412:0,68,255:38,0 chr1 183520203 . T . PASS END=183520214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,120,1800:0,123,255:40,0 chr1 183520215 . A G, 49.66 PASS DP=45;MQ=249.31;MQRankSum=5.722;ReadPosRankSum=0.535;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,21,0:0.467,0.000:45:16,12,0:8,9,0:48:84,0,50,742,822,1564:255,0,255:24,0:4.9662e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,12,9:15,9,11,10 chr1 183520216 . C . PASS END=183520252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:45:0,97,1549:0,97,255:40,0 chr1 183520253 . T . PASS END=183520281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1215:0,89,255:40,0 chr1 183520282 . C . PASS END=183520282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 183520283 . T . PASS END=183520284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 183520285 . C . PASS END=183520285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 183520286 . C . PASS END=183520287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 183520288 . T . PASS END=183520288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 183520289 . G . PASS END=183520294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:28,0 chr1 183520295 . T . PASS END=183520311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:25:0,67,931:0,67,255:25,0 chr1 183520312 . T . PASS END=183520312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:24,0 chr1 183520313 . G . PASS END=183520316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:25,0 chr1 183520317 . A . PASS END=183520317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 183520318 . G . PASS END=183520321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 183520322 . A . PASS END=183520322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:19,0 chr1 183520323 . A . PASS END=183520323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 183520324 . A . PASS END=183520325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:19,0 chr1 183520953 . T . PASS END=183520955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:24,0 chr1 183520956 . A . PASS END=183520957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 183520958 . C . PASS END=183520958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 183520959 . T . PASS END=183520966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 183520967 . T . PASS END=183520967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 183520968 . T . PASS END=183520972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 183520973 . G . PASS END=183520973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 183520974 . A . PASS END=183520976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 183520977 . C . PASS END=183520977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 183520978 . A . PASS END=183521066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:38:0,90,1476:0,90,255:40,0 chr1 183522112 . A . PASS END=183522112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:8,0 chr1 183522113 . A . PASS END=183522119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr1 183522120 . G . PASS END=183522143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,344:0,30,255:12,0 chr1 183522144 . C . PASS END=183522144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 183522145 . A . PASS END=183522156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 183522157 . G . PASS END=183522157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 183522158 . A . PASS END=183522162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 183522163 . G . PASS END=183522163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr1 183522164 . A . PASS END=183522164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 183522165 . A . PASS END=183522166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 183522167 . G . PASS END=183522167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 183522168 . A . PASS END=183522168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 183522169 . A . PASS END=183522169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183522170 . G . LowGQ END=183522170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:5,0,255:12,0 chr1 183522171 . C . PASS END=183522173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183522174 . C . PASS END=183522174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 183522175 . A . PASS END=183522181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 183522182 . G . PASS END=183522184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 183522185 . T . PASS END=183522186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 183522187 . G . PASS END=183522188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 183522189 . C . PASS END=183522189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 183522190 . C . PASS END=183522195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 183522196 . G . PASS END=183522197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183522198 . G . PASS END=183522199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 183522200 . C . PASS END=183522202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 183522203 . G . PASS END=183522205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 183522206 . C . PASS END=183522206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 183522207 . C . PASS END=183522214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 183522215 . G . PASS END=183522215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 183522216 . C . PASS END=183522255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,570:0,48,255:18,0 chr1 183522256 . G . PASS END=183522256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 183522257 . C . PASS END=183522257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:11,0 chr1 183522258 . A . PASS END=183522258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 183522259 . G . PASS END=183522260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 183522261 . A . PASS END=183522263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 183522264 . G . PASS END=183522287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 183522288 . G . PASS END=183522288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 183522289 . A . PASS END=183522289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 183522290 . A . PASS END=183522290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 183522291 . A . PASS END=183522296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 183522297 . A . PASS END=183522297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 183522298 . C . PASS END=183522302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 183522303 . T . PASS END=183522304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183522305 . C . PASS END=183522306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 183522307 . T . PASS END=183522315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 183522316 . A . LowGQ END=183522316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,333:16,0,255:9,0 chr1 183522317 . G . PASS END=183522317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 183522318 . A . PASS END=183522318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:8,0 chr1 183522319 . C . PASS END=183522327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 183522328 . G . PASS END=183522328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 183522329 . G . PASS END=183522331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 183522332 . A . PASS END=183522332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 183522333 . A . PASS END=183522336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 183524706 . A . PASS END=183524706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,149,255:40,0 chr1 183524735 . T . PASS END=183524735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 183524740 . G . PASS END=183524740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 183524743 . A . PASS END=183524743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 183524808 . T . PASS END=183524808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:43:0,90,1350:0,129,255:30,0 chr1 183524855 . C A, 525.40 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,20,0:0,15,0:450:563,478,0,663,663,663:255,108,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,22:0,0,20,15 chr1 183524859 . G . LowGQ END=183524859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:0:36:0,0,1039:47,0,255:32,1 chr1 183524983 . A . PASS END=183524983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 183524991 . G . PASS END=183524991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr1 183525156 . T . PASS END=183525156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 183525253 . C . PASS END=183525365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,146,255:40,0 chr1 183525368 . G . PASS END=183525368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 183529231 . C . PASS END=183529408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:31:0,90,1350:0,93,255:40,0 chr1 183529411 . G . PASS END=183529411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:29,0 chr1 183529423 . G . PASS END=183529423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 183532330 . C . PASS END=183532396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,105,1382:0,105,255:40,0 chr1 183532397 . T . PASS END=183532397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1363:0,73,255:38,0 chr1 183532398 . C . PASS END=183532441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:83:36:0,83,1310:0,83,255:40,0 chr1 183532560 . G . PASS END=183532560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 183532568 . C . PASS END=183532570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 183532571 . C . PASS END=183532571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 183532572 . A . PASS END=183532600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,880:0,62,255:26,0 chr1 183532601 . T . PASS END=183532605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr1 183532606 . T . PASS END=183532606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 183532607 . A . PASS END=183532631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1027:0,84,255:34,0 chr1 183532632 . T . PASS END=183532632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:33,0 chr1 183532633 . A . PASS END=183532695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1217:0,89,255:36,0 chr1 183532696 . G . PASS END=183532718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,945:0,75,255:26,0 chr1 183532719 . T . PASS END=183532719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 183532720 . C . PASS END=183532720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 183533139 . C . PASS END=183533165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,194,255:40,0 chr1 183534839 . C . PASS END=183534839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr1 183534840 . T . PASS END=183534850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr1 183534851 . G . PASS END=183534851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 183534852 . G . PASS END=183534889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,962:0,78,255:26,0 chr1 183534890 . T . PASS END=183534894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183534895 . G . PASS END=183534914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 183536055 . C . PASS END=183536065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:26,0 chr1 183536066 . G . PASS END=183536066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 183536067 . C . PASS END=183536070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr1 183536071 . G . PASS END=183536072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 183536073 . G . PASS END=183536084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:27:0,72,1055:0,74,255:26,0 chr1 183536085 . C . PASS END=183536087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 183536088 . A . PASS END=183536088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 183536089 . A . PASS END=183536090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 183536091 . T . PASS END=183536092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 183536093 . G . PASS END=183536097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,883:0,83,255:28,0 chr1 183536098 . A . PASS END=183536098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 183536099 . G . PASS END=183536102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183536103 . G . PASS END=183536104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 183536105 . T . PASS END=183536108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 183536109 . G . PASS END=183536123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr1 183536338 . C . PASS END=183536338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 183536339 . C . PASS END=183536339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:29,0 chr1 183536340 . T . PASS END=183536480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1215:0,84,255:40,0 chr1 183538277 . C . PASS END=183538320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,122,255:40,0 chr1 183538324 . T . PASS END=183538324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 183539909 . C . PASS END=183539909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1226:0,102,255:34,0 chr1 183539915 . C . PASS END=183539974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1176:0,86,255:40,0 chr1 183539977 . A . PASS END=183539977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1480:0,107,255:38,0 chr1 183542320 . C . PASS END=183542406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1215:0,85,255:40,0 chr1 183542407 . T . PASS END=183542409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:23,0 chr1 183542410 . C . PASS END=183542414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,57,255:19,0 chr1 183542415 . A . PASS END=183542423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,825:0,69,255:23,0 chr1 183542424 . G . PASS END=183542424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 183542425 . C . PASS END=183542427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr1 183543622 . C . PASS END=183543624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 183543625 . G . PASS END=183543631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1147:0,87,255:30,0 chr1 183543632 . T . PASS END=183543632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:41:30:0,41,973:0,41,255:27,0 chr1 183543633 . C . PASS END=183543638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr1 183543639 . C . PASS END=183543639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 183543640 . C . PASS END=183543643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 183543644 . T . PASS END=183543644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:28,0 chr1 183543645 . C . PASS END=183543646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 183543647 . A . PASS END=183543647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 183543648 . T . PASS END=183543648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 183543649 . T . PASS END=183543649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 183543650 . T . PASS END=183543668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1125:0,80,255:37,0 chr1 183543669 . A . PASS END=183543669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:35,0 chr1 183543670 . C . PASS END=183543736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1390:0,81,255:40,0 chr1 183543737 . A . PASS END=183543737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,0 chr1 183543738 . A . PASS END=183543747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,101,255:37,0 chr1 183543748 . A . PASS END=183543748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1268:0,72,255:28,0 chr1 183543749 . T . PASS END=183543756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:28,0 chr1 183546731 . T . PASS END=183546731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 183546733 . C . PASS END=183546842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,102,1557:0,102,255:40,0 chr1 183556029 . C . PASS END=183556067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:28:0,80,1086:0,80,255:34,0 chr1 183556068 . A . PASS END=183556068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr1 183556069 . G . PASS END=183556071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1247:0,86,255:34,0 chr1 183556072 . A . PASS END=183556072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:32,0 chr1 183556073 . C . PASS END=183556082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1288:0,92,255:35,0 chr1 183556083 . C . PASS END=183556083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr1 183556084 . T . PASS END=183556107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1219:0,91,255:33,0 chr1 183556108 . A . PASS END=183556112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 183559291 . C . PASS END=183559293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 183559294 . C . PASS END=183559294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr1 183559295 . T . PASS END=183559297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1155:0,87,255:30,0 chr1 183559298 . G . PASS END=183559304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 183559305 . T . PASS END=183559305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr1 183559306 . C . PASS END=183559306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 183559307 . A . PASS END=183559307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 183559308 . T . PASS END=183559308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 183559309 . G . PASS END=183559312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 183559313 . T . PASS END=183559313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 183559314 . T . PASS END=183559334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:30:0,80,1177:0,80,255:36,0 chr1 183559335 . C . PASS END=183559335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 183559336 . A . PASS END=183559421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1288:0,92,255:38,0 chr1 183559422 . G . PASS END=183559422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:32,0 chr1 183559423 . C . PASS END=183559453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,92,255:32,0 chr1 183559454 . A . PASS END=183559464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:27:0,72,1076:0,74,255:26,0 chr1 183559562 . A . PASS END=183559562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 183559728 . G . PASS END=183559728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 183592592 . T . PASS END=183592606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,122,255:40,0 chr1 183596667 . C . PASS END=183596729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,129,255:40,0 chr1 183599596 . C . PASS END=183599614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,760:0,63,255:27,0 chr1 183599615 . A . PASS END=183599767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:28:0,84,1025:0,84,255:40,0 chr1 183599768 . C . PASS END=183599772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:26,0 chr1 183602217 . C . PASS END=183602298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:32:0,93,1395:0,96,255:40,0 chr1 183604652 . T . PASS END=183604682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:27:0,80,964:0,80,255:34,0 chr1 183604683 . C . PASS END=183604683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr1 183604684 . G . PASS END=183604785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:36:0,90,1344:0,101,255:39,0 chr1 183604786 . C . PASS END=183604786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:29,0 chr1 183604787 . T . PASS END=183604790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,105,255:30,0 chr1 183604791 . A . PASS END=183604791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:26,0 chr1 183604792 . C . PASS END=183604794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 183616813 . T . PASS END=183616824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 183616825 . T . PASS END=183616825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:32,1 chr1 183616826 . T . PASS END=183616828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:38:37:0,38,1185:0,38,255:34,1 chr1 183616829 . T . PASS END=183616829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1260:0,72,255:36,0 chr1 183616830 . T . PASS END=183616834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1264:0,92,255:37,0 chr1 183616835 . T . PASS END=183616835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr1 183616836 . T . PASS END=183617085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1203:0,81,255:40,1 chr1 183617086 . T . PASS END=183617086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1317:0,51,255:36,0 chr1 183617087 . C . PASS END=183617349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:42:0,85,1371:0,85,255:40,0 chr1 183617350 . T . PASS END=183617350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1395:0,71,255:36,0 chr1 183617351 . A . PASS END=183617916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:34:0,82,1259:0,82,255:40,1 chr1 183711293 . A . PASS END=183711424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,102,1530:0,120,255:40,0 chr1 183774432 . A . PASS END=183774458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1275:0,81,255:37,0 chr1 183775509 . A . PASS END=183775619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,117,1755:0,134,255:40,0 chr1 183816700 . G . PASS END=183816701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,682:0,44,255:19,0 chr1 183816702 . T . PASS END=183816707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 183816708 . G . PASS END=183816708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 183816709 . G . PASS END=183816711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 183816712 . C . PASS END=183816712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 183816713 . A . PASS END=183816740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,784:0,63,255:26,0 chr1 183816741 . A . PASS END=183816752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 183816753 . T . PASS END=183816756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 183816757 . A . PASS END=183816760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 183816761 . G . PASS END=183816761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 183816762 . G . PASS END=183816891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:29:0,82,1041:0,82,255:39,0 chr1 183816892 . G . PASS END=183816892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:29,0 chr1 183816893 . A . PASS END=183816895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:29,0 chr1 183816896 . T . PASS END=183816907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:25:0,66,990:0,70,255:25,0 chr1 183816908 . G . PASS END=183816908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr1 183835130 . G . PASS END=183835207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,137,255:40,0 chr1 183849750 . T . PASS END=183849774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1056:0,87,255:36,0 chr1 183849775 . T . PASS END=183849775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1264:0,72,255:34,0 chr1 183849776 . G . PASS END=183849776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 183849777 . G . PASS END=183849925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1215:0,88,255:40,0 chr1 183849926 . A . PASS END=183849933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,73,255:26,0 chr1 183849934 . A . PASS END=183849934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:22,0 chr1 183852920 . A . PASS END=183853044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:38:0,93,1395:0,98,255:40,0 chr1 183853857 . C . PASS END=183853873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,852:0,66,255:23,0 chr1 183853874 . A . PASS END=183853874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr1 183853875 . G . PASS END=183853876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 183853877 . G . PASS END=183853877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 183853878 . C . PASS END=183853898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1055:0,84,255:35,0 chr1 183853899 . A . PASS END=183853899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:34,0 chr1 183853900 . T . PASS END=183854072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:36:0,92,1276:0,92,255:40,0 chr1 183857608 . G . PASS END=183857711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,100,1312:0,100,255:40,0 chr1 183861211 . G . PASS END=183861295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,143,255:40,0 chr1 183866942 . G . PASS END=183867031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:34:0,92,1164:0,92,255:40,0 chr1 183869284 . G . PASS END=183869291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 183869292 . G . PASS END=183869293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 183869294 . A . PASS END=183869298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 183869299 . A . PASS END=183869300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 183869301 . T . PASS END=183869301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 183869302 . G . PASS END=183869355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:30,0 chr1 183869356 . C . PASS END=183869370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1000:0,78,255:26,0 chr1 183871702 . G . PASS END=183871734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,183,255:40,0 chr1 183873984 . G . PASS END=183874105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,99,1491:0,99,255:40,0 chr1 183876146 . C . PASS END=183876147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 183876148 . A . PASS END=183876148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 183876149 . T . PASS END=183876154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:25,0 chr1 183876155 . G . PASS END=183876157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 183876158 . A . PASS END=183876158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 183876159 . T . PASS END=183876161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 183876162 . G . PASS END=183876162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 183876163 . A . PASS END=183876163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 183876164 . G . PASS END=183876164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 183876165 . A . PASS END=183876166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr1 183876167 . T . PASS END=183876171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183876172 . C . PASS END=183876176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 183876177 . G . PASS END=183876180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 183876181 . A . PASS END=183876181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 183876182 . C T, 50.00 PASS DP=29;MQ=249.63;MQRankSum=3.969;ReadPosRankSum=1.601;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,16,0:0.552,0.000:29:7,10,0:6,6,0:48:85,0,49,572,465,1037:255,0,255:13,0:5.0000e+01,6.8857e-05,5.2327e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,8,8:6,7,8,8 chr1 183876183 . G . PASS END=183876183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 183876184 . C . PASS END=183876185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 183876186 . A . PASS END=183876186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 183876187 . G . PASS END=183876192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 183876193 . C . PASS END=183876193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 183876194 . C . PASS END=183876194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 183876195 . T . PASS END=183876195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 183876196 . C . PASS END=183876199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 183876200 . C . PASS END=183876218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:23,0 chr1 183876219 . G . PASS END=183876219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 183876220 . T . PASS END=183876225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 183876226 . G . PASS END=183876229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 183876230 . C . PASS END=183876235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 183881216 . A . PASS END=183881216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 183881217 . C . PASS END=183881221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:25,0 chr1 183881222 . T . PASS END=183881222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:23,0 chr1 183881223 . C . PASS END=183881227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 183881228 . G . PASS END=183881229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr1 183881230 . C . PASS END=183881230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 183881231 . T . PASS END=183881236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1024:0,87,255:29,0 chr1 183881237 . G . PASS END=183881237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 183881238 . A . PASS END=183881281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:31:0,90,1350:0,93,255:40,0 chr1 183881282 . C . PASS END=183881282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:40,0 chr1 183881283 . A . PASS END=183881293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,120,1800:0,126,255:40,0 chr1 183881294 . T . PASS END=183881294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1274:0,59,255:36,0 chr1 183881295 . G . PASS END=183881366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,90,255:40,0 chr1 183881367 . A . PASS END=183881367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 183881368 . C . PASS END=183881377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 183881378 . C . PASS END=183881388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:28:0,45,675:0,68,255:18,0 chr1 183881389 . A . PASS END=183881390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr1 183881391 . C . PASS END=183881391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 183881392 . C . PASS END=183881392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:18,0 chr1 183881393 . T . PASS END=183881402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:18,0 chr1 183885579 . A . PASS END=183885738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:95:47:0,95,1595:0,95,255:40,0 chr1 183885739 . T . PASS END=183885739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:66:48:0,66,1578:0,66,255:40,0 chr1 183885740 . G . PASS END=183885813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,96,255:40,0 chr1 183885814 . C . PASS END=183885814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 183885815 . A . PASS END=183885816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 183885817 . C . PASS END=183885817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 183885818 . A . PASS END=183885826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 183885827 . A . PASS END=183885835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr1 183891356 . T . PASS END=183891470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,116,1504:0,116,255:40,0 chr1 183895239 . A . PASS END=183895241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,732:0,66,255:24,0 chr1 183895242 . T . PASS END=183895242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 183895243 . T . PASS END=183895245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 183895246 . G . PASS END=183895246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 183895247 . A . PASS END=183895252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 183895253 . G . PASS END=183895253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 183895254 . A . PASS END=183895263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 183895264 . T . PASS END=183895264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 183895265 . G . PASS END=183895287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1116:0,87,255:40,0 chr1 183895288 . A . PASS END=183895288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1281:0,79,255:39,0 chr1 183895289 . G . PASS END=183895401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,96,255:40,0 chr1 183895402 . C . PASS END=183895426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,889:0,67,255:26,0 chr1 183899363 . T . PASS END=183899375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,128,255:40,0 chr1 183899376 . T . PASS END=183899376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1651:0,75,255:40,0 chr1 183899377 . C . PASS END=183899423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:39:0,93,1395:0,98,255:40,0 chr1 183907895 . T . PASS END=183907899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 183907900 . G . PASS END=183907919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,615:0,45,255:18,0 chr1 183907920 . G . PASS END=183907921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 183907922 . G . PASS END=183907923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 183907924 . C . PASS END=183907949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,826:0,72,255:26,0 chr1 183907950 . T . PASS END=183908084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,980:0,81,255:40,0 chr1 183908085 . C . PASS END=183908093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,900:0,87,255:26,0 chr1 183908094 . T . PASS END=183908094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 183908095 . G . PASS END=183908097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:20,0 chr1 183908098 . T . PASS END=183908111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,690:0,44,255:19,0 chr1 183908112 . A . PASS END=183908112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:12,0 chr1 183908113 . A . PASS END=183908113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 183908114 . G . PASS END=183908116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 183908117 . T . PASS END=183908130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:12:0,30,450:0,36,255:13,0 chr1 183908131 . C . PASS END=183908131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 183908132 . T . PASS END=183908141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 183908142 . C . PASS END=183908144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 183908145 . G . PASS END=183908151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 183908152 . A . PASS END=183908153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 183908154 . T . PASS END=183908171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:8:0,24,302:0,24,255:9,0 chr1 183909715 . A . PASS END=183909913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1172:0,88,255:40,0 chr1 183909914 . C . PASS END=183909921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,990:0,99,255:26,0 chr1 183913330 . A . PASS END=183913444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1215:0,86,255:40,0 chr1 183913445 . C . PASS END=183913457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:27:0,74,1092:0,74,255:26,0 chr1 183914566 . C . PASS END=183914654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,964:0,81,255:39,0 chr1 183914655 . G . PASS END=183914655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 183914656 . C . PASS END=183914693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:35,0 chr1 183914694 . G . PASS END=183914698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:25,0 chr1 183920141 . T . PASS END=183920218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:31:0,81,1215:0,87,255:40,0 chr1 183920219 . T . PASS END=183920219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 183920220 . T . PASS END=183920232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 183920233 . G . PASS END=183920247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 183923896 . C . PASS END=183923972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:62:0,120,1800:0,152,255:40,0 chr1 183925480 . A . PASS END=183925574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:50:0,115,1800:0,115,255:40,0 chr1 183925575 . G . PASS END=183925578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,134,255:40,0 chr1 183928051 . C . PASS END=183928106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:32:0,87,1305:0,90,255:40,0 chr1 183928107 . C . PASS END=183928107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:28,0 chr1 183928108 . T . PASS END=183928110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 183928111 . T . PASS END=183928111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1017:0,49,255:27,0 chr1 183933035 . T . PASS END=183933037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 183933038 . T . PASS END=183933038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 183933039 . T . PASS END=183933197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:87:30:0,87,1305:0,90,255:40,0 chr1 183938403 . C . PASS END=183938425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:18,0 chr1 183938426 . A . PASS END=183938426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 183938427 . A . PASS END=183938427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 183938428 . G . PASS END=183938434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,648:0,60,255:23,0 chr1 183938435 . A . PASS END=183938435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:21,0 chr1 183938436 . T . PASS END=183938444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 183938445 . A . PASS END=183938445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 183938446 . G . PASS END=183938446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 183938447 . G . PASS END=183938448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 183938449 . C . PASS END=183938449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 183938450 . C . PASS END=183938450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 183938451 . A . PASS END=183938451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 183938452 . G . PASS END=183938587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:39,0 chr1 183938588 . G . PASS END=183938607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,62,255:26,0 chr1 183942750 . C . PASS END=183942884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1086:0,83,255:40,0 chr1 183944231 . C . PASS END=183944333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1047:0,80,255:40,0 chr1 183944334 . T . PASS END=183944334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 183944335 . C . PASS END=183944336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr1 183944337 . T . PASS END=183944348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:31:0,69,1035:0,77,255:24,0 chr1 183947544 . T . PASS END=183947654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:48:0,120,1800:0,127,255:40,0 chr1 184006229 . C . PASS END=184006244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 184006245 . T . PASS END=184006269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,247:0,21,247:8,0 chr1 184006270 . G . PASS END=184006270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 184006271 . C . PASS END=184006273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 184006274 . C . PASS END=184006274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 184006275 . C . PASS END=184006281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 184006282 . G . PASS END=184006287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 184006288 . C . PASS END=184006308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 184006309 . G . PASS END=184006328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr1 184006329 . C . PASS END=184006332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 184006333 . G . PASS END=184006333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 184006334 . G . PASS END=184006336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 184006337 . C . PASS END=184006337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 184006338 . T . PASS END=184006338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 184006339 . C . PASS END=184006355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 184006356 . G . PASS END=184006356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 184006357 . G . PASS END=184006358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 184006359 . A . PASS END=184006359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 184006360 . A . PASS END=184006360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 184006361 . A . PASS END=184006361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 184006362 . C . PASS END=184006368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 184006369 . C . PASS END=184006369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 184006370 . T . PASS END=184006379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 184006380 . C . PASS END=184006406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 184006407 . A . PASS END=184006407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr1 184006408 . G . PASS END=184006424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 184006425 . C . PASS END=184006428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 184006429 . G . PASS END=184006429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 184006430 . A . PASS END=184006431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 184006432 . C . PASS END=184006479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 184006480 . G . PASS END=184006483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 184006484 . G . PASS END=184006488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr1 184006489 . C . PASS END=184006489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 184006490 . A . PASS END=184006491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:10:0,15,225:0,30,255:5,0 chr1 184020890 . A . PASS END=184020890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:35,0 chr1 184020891 . T . PASS END=184020891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1131:0,36,255:33,0 chr1 184020892 . G . PASS END=184021002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,92,255:40,0 chr1 184021003 . C . PASS END=184021021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:26,0 chr1 184021022 . A . PASS END=184021024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 184023488 . T . PASS END=184023569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:52:0,120,1800:0,154,255:40,0 chr1 184023862 . G . PASS END=184023872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,749:0,72,255:25,0 chr1 184023873 . C . PASS END=184023873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 184023874 . A . PASS END=184023877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 184023878 . A . PASS END=184023882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 184023883 . A . PASS END=184023883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,808:0,67,255:26,0 chr1 184023884 . C . PASS END=184023884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 184023885 . T . PASS END=184023885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 184023886 . G . PASS END=184023934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1179:0,88,255:35,0 chr1 184023935 . A . PASS END=184023935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1138:0,77,255:34,0 chr1 184023936 . G . PASS END=184023940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1258:0,89,255:35,0 chr1 184023941 . G . PASS END=184023941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:32,0 chr1 184023942 . G . PASS END=184023944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1205:0,88,255:32,0 chr1 184023945 . G . PASS END=184023945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1078:0,55,255:29,0 chr1 184023946 . G . PASS END=184023946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1197:0,88,255:29,0 chr1 184023947 . G . PASS END=184023948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1048:0,55,255:28,0 chr1 184023949 . T . PASS END=184023958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1189:0,88,255:30,0 chr1 184023959 . G . PASS END=184023981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 184023982 . C . PASS END=184023982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 184023983 . C . PASS END=184023989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 184023990 . C . PASS END=184023997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 184027295 . G . PASS END=184027301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:33,0 chr1 184039750 . A . PASS END=184039810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,131,255:40,0 chr1 184041185 . T . PASS END=184041254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,163,255:40,0 chr1 184041291 . G . PASS END=184041489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:42:0,110,1543:0,110,255:40,0 chr1 184041961 . A . PASS END=184041997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,197,255:40,0 chr1 184062759 . G . PASS END=184062883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:57:0,99,1485:0,149,255:40,0 chr1 184064165 . A . PASS END=184064186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1025:0,87,255:34,0 chr1 184064187 . C . PASS END=184064187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:33,0 chr1 184064188 . T . PASS END=184064226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:36:0,96,1380:0,96,255:40,0 chr1 184064259 . A . PASS END=184064273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,102,1588:0,102,255:40,0 chr1 184064824 . T . PASS END=184064842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 184064843 . C . PASS END=184064843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 184064844 . A . PASS END=184064854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,917:0,66,255:25,0 chr1 184064855 . C . PASS END=184064855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 184064856 . A . PASS END=184064856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 184064857 . G . PASS END=184064857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 184064858 . C . PASS END=184064861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 184064862 . A . PASS END=184064862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,948:0,51,255:29,0 chr1 184064863 . A . PASS END=184064877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1080:0,90,255:31,0 chr1 184064878 . A . PASS END=184064878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:29,0 chr1 184064879 . G . PASS END=184064887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 184064888 . A . PASS END=184064888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr1 184064889 . G . PASS END=184064889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 184064890 . A . PASS END=184064890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 184064891 . G . PASS END=184064909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:32,0 chr1 184064910 . T . PASS END=184064949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr1 184064950 . G . PASS END=184064950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 184064951 . T . PASS END=184064955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,624:0,60,255:20,0 chr1 184064956 . A . PASS END=184064961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 184088854 . A . PASS END=184088856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 184088857 . A . PASS END=184088857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 184088858 . A . PASS END=184088882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr1 184088883 . G . PASS END=184088888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:29,0 chr1 184088889 . G . PASS END=184088889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 184088890 . A . PASS END=184088896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 184088897 . A . PASS END=184088902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 184088903 . C . PASS END=184088906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 184088907 . A . PASS END=184088916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 184088917 . G . PASS END=184088921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,84,255:19,0 chr1 184088922 . C . PASS END=184088926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 184446644 . A . PASS END=184446737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,134,255:40,0 chr1 184476722 . A . PASS END=184476816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:48:0,120,1800:0,144,255:40,0 chr1 184478444 . C . PASS END=184478470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:50:0,120,1800:0,134,255:40,0 chr1 184559873 . G . PASS END=184559949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:71:0,120,1800:0,161,255:40,0 chr1 184561359 . G . PASS END=184561360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr1 184561361 . A . PASS END=184561401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:91:0,120,1800:0,221,255:40,0 chr1 184567535 . C . PASS END=184567595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,192,255:40,2 chr1 184588652 . G . PASS END=184588690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,173,255:40,0 chr1 184663197 . T . PASS END=184663543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:46:0,93,1395:0,120,255:40,0 chr1 184663544 . C . PASS END=184663580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,102,1530:0,102,255:40,0 chr1 184663581 . T C, 48.26 PASS DP=45;MQ=250.00;MQRankSum=5.615;ReadPosRankSum=0.948;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,19,0:0.432,0.000:44:13,12,0:12,7,0:47:83,0,50,651,885,1536:255,0,255:20,0:4.8257e+01,8.6719e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,6,13:10,15,9,10 chr1 184663582 . T . PASS END=184663606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:32:0,82,1164:0,82,255:34,0 chr1 184670503 . T . PASS END=184670678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:44:0,120,1800:0,131,255:40,0 chr1 184671945 . C . PASS END=184671946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 184671947 . C . PASS END=184671952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 184671953 . T . PASS END=184671953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr1 184671954 . T . PASS END=184672114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1038:0,87,255:40,0 chr1 184672115 . C . PASS END=184672130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,914:0,62,255:26,0 chr1 184675777 . C . PASS END=184675942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,99,1473:0,99,255:40,0 chr1 184677287 . C . PASS END=184677288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,969:0,75,255:26,0 chr1 184677289 . C . PASS END=184677426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,971:0,81,255:40,0 chr1 184677427 . T . PASS END=184677463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:34:0,87,1305:0,102,255:40,0 chr1 184677464 . G A, 43.51 PASS DP=34;MQ=250.00;MQRankSum=4.739;ReadPosRankSum=2.685;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,12,0:0.353,0.000:34:13,8,0:9,4,0:43:78,0,50,429,787,1216:255,0,255:19,0:4.3515e+01,2.1512e-04,5.3000e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,3,9:9,13,5,7 chr1 184677465 . A . PASS END=184677466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:29,0 chr1 184677467 . T . PASS END=184677471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,990:0,83,255:24,0 chr1 184677472 . T . PASS END=184677472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:14:34:0,14,992:0,14,255:20,0 chr1 184677473 . A . PASS END=184677475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:60:33:0,60,900:0,69,255:22,0 chr1 184677476 . A . PASS END=184677476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1101:0,57,255:20,0 chr1 184677477 . G . PASS END=184677478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:20,0 chr1 184679528 . T . PASS END=184679684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:39:0,93,1433:0,93,255:40,0 chr1 184680857 . A . PASS END=184681003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1302:0,92,255:40,0 chr1 184681004 . T . PASS END=184681004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1349:0,76,255:31,0 chr1 184681005 . C . PASS END=184681008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:36:0,87,1305:0,92,255:33,0 chr1 184681009 . G . PASS END=184681011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1080:0,69,255:24,0 chr1 184681567 . T . PASS END=184681732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:49:0,104,1800:0,104,255:40,0 chr1 184686022 . C . PASS END=184686146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:96:45:0,96,1440:0,131,255:40,0 chr1 184686674 . T . PASS END=184686757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:74:0,120,1800:0,151,255:40,0 chr1 184688296 . C . PASS END=184688379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,1:123:99:93:0,120,1800:0,255,255:40,0 chr1 184688577 . C . PASS END=184688702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:35:0,99,1485:0,105,255:40,0 chr1 184690423 . T . PASS END=184690520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,137,255:40,0 chr1 184692885 . C . PASS END=184692949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:67:0,120,1800:0,183,255:40,0 chr1 184692950 . C . PASS END=184692990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,3:95:81:86:0,81,1215:0,106,255:40,1 chr1 184695389 . C . PASS END=184695508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:33:0,81,1156:0,83,255:40,0 chr1 184695509 . A . PASS END=184695511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 184695512 . C . PASS END=184695513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 184695514 . T . PASS END=184695516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,79,255:26,0 chr1 184695517 . A . PASS END=184695517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 184695518 . A . PASS END=184695518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:27,0 chr1 184695519 . T . PASS END=184695520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 184695521 . A . PASS END=184695521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 184695522 . A . PASS END=184695523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 184701971 . T . PASS END=184702124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:96:40:0,96,1440:0,120,255:40,0 chr1 184703665 . C . PASS END=184703777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,2:77:99:54:0,120,1800:0,141,255:40,0 chr1 184706159 . C . PASS END=184706167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,234,255:40,0 chr1 184706168 . G . PASS END=184706198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,203,255:40,0 chr1 184706745 . T . PASS END=184706845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:40:0,114,1710:0,120,255:40,0 chr1 184718681 . C . PASS END=184718703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:96:0,120,1800:0,200,255:40,0 chr1 184718704 . C . PASS END=184718726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,3:109:99:108:0,120,1800:0,255,255:40,0 chr1 184723623 . C . PASS END=184723623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 184723624 . C . PASS END=184723624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 184723625 . A . PASS END=184723631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 184723632 . T . PASS END=184723671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr1 184723672 . A . PASS END=184723678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr1 184723679 . G . PASS END=184723679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 184723680 . G . PASS END=184723683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 184723684 . C . PASS END=184723684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 184723685 . C . PASS END=184723686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 184723687 . A . PASS END=184723700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 184723701 . G . PASS END=184723701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 184723702 . C . PASS END=184723720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr1 184723721 . T . PASS END=184723723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 184723724 . C . PASS END=184723745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 184723746 . G . PASS END=184723772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:13,0 chr1 184723773 . T . PASS END=184723780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 184760159 . T . PASS END=184760199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:57:0,120,1800:0,128,255:40,0 chr1 184764111 . T . PASS END=184764113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 184764114 . C . PASS END=184764140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,775:0,60,255:26,0 chr1 184764141 . C . PASS END=184764163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:29,0 chr1 184764164 . T . PASS END=184764164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 184764165 . C . PASS END=184764171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:31,0 chr1 184764172 . T . PASS END=184764172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr1 184764173 . C . PASS END=184764219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1202:0,83,255:32,0 chr1 184764220 . C . PASS END=184764220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:30,0 chr1 184764221 . A . PASS END=184764228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr1 184764229 . T . PASS END=184764229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 184764230 . C . PASS END=184764236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 184764237 . A . PASS END=184764238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 184764239 . G . PASS END=184764293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1202:0,86,255:34,0 chr1 184764294 . T . PASS END=184764294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:32,0 chr1 184764295 . T . PASS END=184764356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1197:0,86,255:34,0 chr1 184764357 . A . PASS END=184764357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 184764358 . C . PASS END=184764423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1166:0,83,255:33,0 chr1 184764424 . T . PASS END=184764426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,1005:0,76,255:26,0 chr1 184764427 . G . PASS END=184764428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 184764429 . A . PASS END=184764472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:26,0 chr1 184764473 . C . PASS END=184764473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 184764474 . C . PASS END=184764476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 184764477 . G . PASS END=184764477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:21,0 chr1 184764478 . G . PASS END=184764519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,961:0,65,255:26,0 chr1 184764520 . C . PASS END=184764524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 184764525 . T . PASS END=184764569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,939:0,64,255:26,0 chr1 184764570 . G . PASS END=184764571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 184764572 . G . PASS END=184764573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 184764574 . G . PASS END=184764577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 184764578 . G . PASS END=184764591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 184764592 . C . PASS END=184764592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:22,0 chr1 184764593 . T . PASS END=184764595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 184764596 . C . PASS END=184764596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:23,0 chr1 184764597 . T . PASS END=184764599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:24,0 chr1 184764600 . A . PASS END=184764600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 184764601 . C . PASS END=184764611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:26,0 chr1 184764612 . G . PASS END=184764612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 184764613 . T . PASS END=184764614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1015:0,73,255:28,0 chr1 184764615 . G . PASS END=184764616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 184764617 . C . PASS END=184764617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr1 184764618 . G . PASS END=184764624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 184764625 . A . PASS END=184764625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:26,0 chr1 184764626 . T . PASS END=184764631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 184764632 . C . PASS END=184764632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 184764633 . T . PASS END=184764633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,950:0,59,255:26,0 chr1 184764634 . G . PASS END=184764644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 184764645 . C . PASS END=184764645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1015:0,63,255:27,0 chr1 184764646 . T . PASS END=184764667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1073:0,80,255:31,0 chr1 184764668 . T . PASS END=184764668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:31,0 chr1 184764669 . T . PASS END=184764714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1172:0,85,255:34,0 chr1 184764715 . G . PASS END=184764715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr1 184764716 . G . PASS END=184764719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 184764720 . A . PASS END=184764720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 184764721 . G . PASS END=184764734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:32,0 chr1 184764735 . T . PASS END=184764735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr1 184764736 . T . PASS END=184764759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:32,0 chr1 184764760 . C . PASS END=184764760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 184764761 . T . PASS END=184764761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 184764762 . G . PASS END=184764762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 184764763 . A . PASS END=184764783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 184764784 . G . PASS END=184764784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 184764785 . C . PASS END=184764789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 184764790 . A . PASS END=184764790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 184764791 . T . PASS END=184764795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 184764796 . T . PASS END=184764892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,878:0,62,255:26,0 chr1 184764893 . C . PASS END=184764894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 184764895 . A . PASS END=184764904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 184764905 . C . PASS END=184764906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 184764907 . A . PASS END=184764909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 184764910 . G . PASS END=184764918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 184764919 . A . PASS END=184764919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 184764920 . C . PASS END=184764921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 184764922 . C . PASS END=184764942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 184764943 . G . PASS END=184765173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,994:0,80,255:40,0 chr1 184765174 . A . PASS END=184765220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,798:0,75,255:26,0 chr1 184765221 . T . PASS END=184765231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,59,255:20,0 chr1 184767213 . C . PASS END=184767324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:35:0,84,1260:0,89,255:40,0 chr1 184772719 . T . PASS END=184772826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,102,1530:0,120,255:40,0 chr1 184775080 . C . PASS END=184775190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,102,1442:0,102,255:40,0 chr1 184777208 . C . PASS END=184777340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:32:0,81,1205:0,88,255:40,0 chr1 184777341 . A . PASS END=184777364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:26,0 chr1 184777365 . A . PASS END=184777365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 184777366 . G . PASS END=184777369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:22,0 chr1 184787772 . C . PASS END=184787774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr1 184787775 . C . PASS END=184787776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 184787777 . T . PASS END=184787779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 184787780 . G . PASS END=184787786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 184787787 . A . PASS END=184787787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 184787788 . C . PASS END=184787959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1196:0,87,255:40,0 chr1 184792301 . C . PASS END=184792303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 184792304 . T . PASS END=184792304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 184792305 . G . PASS END=184792306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 184792307 . T . PASS END=184792307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 184792308 . C . PASS END=184792317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 184792318 . A . PASS END=184792318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 184792319 . A . PASS END=184792321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 184792322 . A . PASS END=184792322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,992:0,60,255:29,0 chr1 184792323 . G . PASS END=184792332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:32,0 chr1 184792333 . T . PASS END=184792333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,980:0,63,255:30,0 chr1 184792334 . T . PASS END=184792336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:32,0 chr1 184792337 . C . PASS END=184792337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:30,0 chr1 184792338 . A . PASS END=184792463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:32:0,83,1148:0,83,255:40,0 chr1 184792772 . A . PASS END=184792876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,117,1737:0,117,255:40,0 chr1 184800981 . C . PASS END=184801096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:36:0,91,1266:0,91,255:40,0 chr1 184853767 . C . PASS END=184853916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:34:0,81,1215:0,98,255:40,0 chr1 184853917 . T . PASS END=184853929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,984:0,68,255:24,0 chr1 184853930 . G . PASS END=184853931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,851:0,42,255:20,0 chr1 184853932 . A . PASS END=184853933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 184853934 . G . PASS END=184853934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:19,0 chr1 184859242 . C . PASS END=184859242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 184859243 . A . PASS END=184859243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1374:0,79,255:39,0 chr1 184859244 . A . PASS END=184859332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:43:0,86,1524:0,86,255:40,0 chr1 184859333 . A . PASS END=184859333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1551:0,77,255:37,0 chr1 184859334 . G . PASS END=184859351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:40:0,89,1350:0,89,255:40,0 chr1 184859352 . T . PASS END=184859356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:25,0 chr1 184863209 . C . PASS END=184863340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,120,1800:0,132,255:40,0 chr1 184868312 . C . PASS END=184868442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:34:0,87,1305:0,90,255:40,0 chr1 184933485 . T . PASS END=184933716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:52:0,112,1695:0,112,255:40,0 chr1 184943434 . C . PASS END=184943487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:33:0,95,1249:0,95,255:36,0 chr1 184943488 . T . PASS END=184943488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1157:0,58,255:33,0 chr1 185056686 . A . PASS END=185056772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:99:38:0,99,1413:0,103,255:40,0 chr1 185060711 . G . PASS END=185060871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:41:0,103,1621:0,103,255:40,0 chr1 185062193 . C . PASS END=185062408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:46:0,93,1395:0,99,255:40,0 chr1 185067204 . A . PASS END=185067435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1106:0,87,255:40,0 chr1 185067436 . C . PASS END=185067466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 185067467 . C . PASS END=185067472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:21:0,42,630:0,63,255:19,0 chr1 185067473 . C . PASS END=185067474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 185067475 . A . PASS END=185067476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:14,0 chr1 185068923 . A . PASS END=185068925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:23,0 chr1 185068926 . C . PASS END=185069094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:29:0,84,1186:0,87,255:40,0 chr1 185069332 . G . PASS END=185069433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:75:0,120,1800:0,224,255:40,0 chr1 185089151 . T . PASS END=185089403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,104,1378:0,104,255:40,0 chr1 185089515 . T . PASS END=185089641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:48:0,120,1800:0,140,255:40,0 chr1 185092989 . C . PASS END=185093051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:79:0,120,1800:0,175,255:40,0 chr1 185094068 . T . PASS END=185094239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:38:0,99,1372:0,99,255:40,0 chr1 185094240 . G . PASS END=185094242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1373:0,108,255:36,0 chr1 185097801 . C . PASS END=185097879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,120,1800:0,123,255:40,0 chr1 185106499 . C . PASS END=185106638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:39:0,114,1488:0,117,255:40,0 chr1 185106738 . C . PASS END=185106913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:36:0,92,1302:0,92,255:40,0 chr1 185106914 . C . PASS END=185106914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:30,0 chr1 185106915 . A . PASS END=185106918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,89,255:32,0 chr1 185106919 . G . PASS END=185106928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:67:28:0,67,895:0,67,255:26,0 chr1 185108499 . C . PASS END=185108711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:32:0,84,1180:0,84,255:40,0 chr1 185109105 . A . PASS END=185109105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 185109106 . T . PASS END=185109106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 185109107 . G . PASS END=185109108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 185109109 . A . PASS END=185109117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:27,0 chr1 185109118 . A . PASS END=185109130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1088:0,80,255:35,0 chr1 185109131 . C . PASS END=185109131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:34,0 chr1 185109132 . A . PASS END=185109333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:35:0,105,1349:0,105,255:40,0 chr1 185109334 . C . PASS END=185109341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:39:0,60,900:0,117,255:24,0 chr1 185109342 . A . PASS END=185109348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:42:27:0,42,630:0,42,255:16,0 chr1 185109349 . T . PASS END=185109349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,809:0,39,255:16,0 chr1 185109350 . T . PASS END=185109354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,720:0,42,255:17,0 chr1 185112489 . C . PASS END=185112568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,150,255:40,0 chr1 185113038 . C . PASS END=185113161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,99,1485:0,120,255:40,0 chr1 185114571 . C . PASS END=185114700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:49:0,120,1800:0,121,255:40,0 chr1 185116314 . C . PASS END=185116378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,191,255:40,0 chr1 185119511 . C . PASS END=185119624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,110,1520:0,110,255:40,0 chr1 185120957 . C . PASS END=185120970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:90:61:0,90,1800:0,90,255:40,0 chr1 185120971 . T . PASS END=185121067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:52:0,118,1800:0,118,255:40,0 chr1 185125610 . T . PASS END=185125634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:5,0 chr1 185125635 . G . PASS END=185125641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 185125642 . G . PASS END=185125652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 185125653 . G . PASS END=185125653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 185125654 . G . PASS END=185125678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:13,0 chr1 185125679 . C . PASS END=185125698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr1 185125699 . G . PASS END=185125699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 185125700 . G . PASS END=185125733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr1 185125734 . C . PASS END=185125734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 185125735 . G . PASS END=185125735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 185125736 . G . PASS END=185125736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 185125737 . A . PASS END=185125750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 185125751 . C . PASS END=185125751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 185125752 . C . PASS END=185125754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 185125755 . G . PASS END=185125758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 185125759 . C . PASS END=185125763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 185125764 . C . PASS END=185125764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:18,0 chr1 185125765 . G . PASS END=185125765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 185125766 . G . PASS END=185125768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 185125769 . T . PASS END=185125773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:20,0 chr1 185125774 . A . PASS END=185125778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 185125779 . G . PASS END=185125785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 185125786 . G . PASS END=185125786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:20,0 chr1 185125787 . C . PASS END=185125787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 185125788 . C . PASS END=185125788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:21,0 chr1 185125789 . A . PASS END=185125795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 185125796 . C . PASS END=185125824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,607:0,40,255:19,0 chr1 185125825 . T . PASS END=185125825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 185125826 . C . PASS END=185125832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,521:0,42,255:15,0 chr1 185125833 . C . PASS END=185125834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 185125835 . T . PASS END=185125835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 185125836 . A . PASS END=185125836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 185125837 . T . PASS END=185125843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr1 185125844 . T . PASS END=185125844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:13,0 chr1 185129974 . A . PASS END=185130057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:50:0,120,1800:0,133,255:40,0 chr1 185135704 . G . PASS END=185135707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,147,255:40,0 chr1 185135708 . A . PASS END=185135744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,162,255:40,0 chr1 185135745 . A G, 48.88 PASS DP=70;MQ=250.00;MQRankSum=7.141;ReadPosRankSum=6.692;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,31,0:0.443,0.000:70:15,13,0:24,18,0:47:84,0,50,1109,1395,2504:255,0,255:36,0:4.8879e+01,7.7917e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,19,13,18:20,19,15,16 chr1 185135746 . T . PASS END=185135782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,156,255:40,0 chr1 185135783 . T . PASS END=185135784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:59:0,120,1800:0,164,255:40,0 chr1 185137472 . A . PASS END=185137515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,3:101:99:89:0,120,1800:0,151,255:40,0 chr1 185137516 . A . PASS END=185137530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:91:0,120,1800:0,222,255:40,0 chr1 185139196 . A . PASS END=185139242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,184,255:40,0 chr1 185143504 . A . PASS END=185144208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:36:0,93,1280:0,93,255:40,0 chr1 185144209 . A . PASS END=185144209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr1 185144210 . A . PASS END=185144229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1211:0,96,255:33,0 chr1 185144230 . G . PASS END=185144234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 185144235 . A . PASS END=185144235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1093:0,57,255:25,0 chr1 185144236 . C . PASS END=185144241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 185144242 . C . PASS END=185144245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:26:0,54,810:0,71,255:19,0 chr1 185149523 . A . PASS END=185149582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:56:0,120,1800:0,163,255:40,0 chr1 185151078 . A . PASS END=185151210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:49:0,114,1710:0,128,255:40,2 chr1 185153375 . C . PASS END=185153476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:66:0,120,1800:0,185,255:40,0 chr1 185153875 . G . PASS END=185154063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1177:0,80,255:40,0 chr1 185159681 . A . PASS END=185159774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,117,1755:0,134,255:40,0 chr1 185171786 . G . PASS END=185171931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:33:0,84,1235:0,86,255:40,0 chr1 185173832 . A . PASS END=185173995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:42:0,84,1260:0,122,255:40,0 chr1 185175757 . A . PASS END=185175895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:80:48:0,80,1418:0,80,255:40,0 chr1 185183639 . C . PASS END=185183786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:81:46:0,81,1215:0,128,255:40,0 chr1 185183787 . G . PASS END=185183787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:78:46:0,78,1170:0,122,255:25,0 chr1 185190981 . G . PASS END=185191139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:47:0,102,1530:0,120,255:40,0 chr1 185191140 . A . PASS END=185191140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:34,0 chr1 185191141 . G . PASS END=185191150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,89,255:35,0 chr1 185191151 . T . PASS END=185191168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,1035:0,66,255:26,0 chr1 185200709 . C . PASS END=185200840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,138,255:40,0 chr1 185233447 . G . PASS END=185233489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,181,255:40,0 chr1 185236148 . G . PASS END=185236254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:50:0,120,1800:0,150,255:40,0 chr1 185240455 . G . PASS END=185240473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,115,1800:0,115,255:40,0 chr1 185240474 . A G, 215.51 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,30,0:0,26,0:166:253,169,0,2147,169,2154:255,171,0:0,0:2.1551e+02,1.6551e+02,0.0000e+00,4.5000e+02,2.0031e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,26:0,0,24,32 chr1 185240475 . A . PASS END=185240511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,154,255:40,0 chr1 185240512 . C . PASS END=185240521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:55:0,120,1800:0,132,255:40,0 chr1 185245736 . G . PASS END=185245800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:107:0,120,1800:0,255,255:40,0 chr1 185259806 . G . PASS END=185259928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1049:0,82,255:40,1 chr1 185259929 . G . PASS END=185259929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 185259930 . A . PASS END=185259935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 185267167 . T . PASS END=185267415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:32:0,87,1305:0,89,255:40,0 chr1 185267416 . T . PASS END=185267417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 185267418 . T . PASS END=185267420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 185268842 . C . PASS END=185269015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:49:0,120,1800:0,133,255:40,0 chr1 185269131 . G . PASS END=185269146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:63:0,112,1800:0,112,255:40,0 chr1 185269147 . A . PASS END=185269262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:68:0,120,1800:0,152,255:40,0 chr1 185269349 . C . PASS END=185269475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:36:0,90,1350:0,97,255:40,0 chr1 185269569 . C . PASS END=185269690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:83:30:0,83,1202:0,83,255:40,0 chr1 185270104 . C . PASS END=185270328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:32:0,85,1054:0,85,255:40,0 chr1 185270566 . T . PASS END=185270695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:42:0,90,1350:0,110,255:40,0 chr1 185274647 . C . PASS END=185274775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,128,255:40,0 chr1 185275617 . C . PASS END=185275619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:70:0,120,1800:0,197,255:40,0 chr1 185276092 . T . PASS END=185276271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:45:0,101,1355:0,101,255:40,0 chr1 185276621 . C . PASS END=185276794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:87:33:0,87,1247:0,89,255:40,0 chr1 185277099 . C . PASS END=185277149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,172,255:40,0 chr1 185277932 . C . PASS END=185278007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:87:0,120,1800:0,215,255:40,0 chr1 185278135 . T . PASS END=185278279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:96:45:0,96,1440:0,135,255:40,0 chr1 185278280 . G . PASS END=185278291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:34:0,69,1035:0,69,255:25,0 chr1 185278292 . C . PASS END=185278299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 185278300 . C . PASS END=185278304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 185278515 . C . PASS END=185278625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:54:0,120,1800:0,125,255:40,0 chr1 185703756 . G . PASS END=185703756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 185703761 . C . PASS END=185703761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 185703791 . A . PASS END=185703791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 185703825 . T . PASS END=185703825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1380:0,101,255:38,0 chr1 185703872 . T . PASS END=185703872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 185703882 . A . PASS END=185703882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1566:0,113,255:40,0 chr1 185703912 . A . PASS END=185704179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:34:0,84,1253:0,100,255:40,0 chr1 185815158 . A . PASS END=185815228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,173,255:40,0 chr1 185833602 . G . PASS END=185833602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 185833603 . G . PASS END=185833747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:34:0,92,1294:0,92,255:40,0 chr1 185833748 . G . PASS END=185833748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:30,0 chr1 185833749 . A . PASS END=185833757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:32,0 chr1 185833758 . C . PASS END=185833760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,91,255:26,0 chr1 185834873 . G . PASS END=185834902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:86:50:0,86,1609:0,86,255:40,0 chr1 185834903 . G . PASS END=185834995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,137,255:40,0 chr1 185878469 . G . PASS END=185878473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 185878474 . A . PASS END=185878474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 185878475 . A . PASS END=185878477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr1 185878478 . T . PASS END=185878478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 185878479 . G . PASS END=185878479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 185878480 . G . PASS END=185878480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 185878481 . G . PASS END=185878629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:31:0,93,1164:0,93,255:40,0 chr1 185878630 . C . PASS END=185878635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:38,0 chr1 185878636 . T . PASS END=185878640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:69:39:0,69,1035:0,101,255:26,0 chr1 185878649 . T . PASS END=185878649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 185880806 . G . PASS END=185880891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,120,1800:0,171,255:40,0 chr1 185880892 . G . PASS END=185880912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,114,1710:0,155,255:40,0 chr1 185891511 . A . PASS END=185891522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:32,0 chr1 185891523 . G . PASS END=185891523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:32,0 chr1 185891524 . G . PASS END=185891631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1234:0,81,255:40,0 chr1 185891639 . T . PASS END=185891639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 185892522 . G . PASS END=185892525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 185892526 . A . PASS END=185892526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:25,0 chr1 185892527 . C . PASS END=185892528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 185892529 . T . PASS END=185892785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:28:0,84,1070:0,84,255:40,0 chr1 185892792 . C . PASS END=185892792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,111,1665:0,132,255:37,0 chr1 185894179 . A . PASS END=185894323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:96:52:0,96,1440:0,144,255:40,0 chr1 185897678 . A . PASS END=185897782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1215:0,87,255:40,0 chr1 185897783 . A . PASS END=185897783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:34,1 chr1 185897784 . T . PASS END=185897784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:38:0,80,1369:0,80,255:34,1 chr1 185897785 . T . PASS END=185897785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 185897786 . T . PASS END=185897799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1260:0,88,255:35,0 chr1 185902681 . A . PASS END=185902695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,941:0,69,255:26,0 chr1 185902696 . T . PASS END=185902719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1031:0,84,255:31,0 chr1 185902720 . T . PASS END=185902720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 185902721 . C . PASS END=185902949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:87:31:0,87,1156:0,93,255:40,0 chr1 185902950 . G . PASS END=185902950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:41:0,75,1125:0,123,255:25,0 chr1 185902951 . T . PASS END=185902953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:42:0,81,1215:0,87,255:27,0 chr1 185902954 . A . PASS END=185902956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:72:41:0,72,1080:0,107,255:25,0 chr1 185931650 . A . PASS END=185931791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:31:0,87,1066:0,93,255:40,0 chr1 185932900 . G . PASS END=185933027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:46:0,120,1800:0,122,255:40,0 chr1 185933039 . C . PASS END=185933039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,114,1710:0,147,255:38,0 chr1 185934923 . G . PASS END=185934923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 185934934 . A . PASS END=185935047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:95:44:0,95,1635:0,95,255:40,0 chr1 185939467 . G . PASS END=185939625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:31:0,86,1218:0,86,255:40,0 chr1 185946919 . C . PASS END=185946921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1343:0,108,255:37,0 chr1 185946922 . C . PASS END=185946922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr1 185946923 . T . PASS END=185947113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:95:37:0,95,1349:0,95,255:40,0 chr1 185950110 . A . PASS END=185950205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,134,255:40,0 chr1 185951394 . T . PASS END=185951521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:35:0,80,1311:0,80,255:40,0 chr1 185953301 . T . PASS END=185953302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 185953303 . G . LowGQ END=185953303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 185953304 . C . PASS END=185953306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 185953307 . C . PASS END=185953311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 185953312 . T . PASS END=185953319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr1 185953320 . T . PASS END=185953324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr1 185953325 . G . PASS END=185953327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:31,0 chr1 185953328 . C . PASS END=185953328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:29,0 chr1 185953329 . G . PASS END=185953335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1119:0,93,255:38,0 chr1 185953336 . T . PASS END=185953336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 185953337 . G . PASS END=185953445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:34:0,81,1215:0,90,255:40,0 chr1 185956564 . T . PASS END=185956676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:36:0,98,1365:0,98,255:40,0 chr1 185956688 . A . PASS END=185956688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1488:0,110,255:36,0 chr1 185958620 . A . PASS END=185958620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 185958621 . A . PASS END=185958644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,732:0,60,255:22,0 chr1 185958645 . G . PASS END=185958645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 185958646 . T . PASS END=185958649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 185958650 . A . PASS END=185958655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 185958656 . T . PASS END=185958656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 185958657 . C . PASS END=185958774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1056:0,84,255:40,0 chr1 185958775 . C . PASS END=185958779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:25,0 chr1 185959407 . T . PASS END=185959575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:30:0,87,1125:0,87,255:40,0 chr1 185962314 . A . PASS END=185962423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,102,1530:0,108,255:40,0 chr1 185962424 . T . PASS END=185962425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 185962426 . A . PASS END=185962426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:31,0 chr1 185962427 . A . PASS END=185962441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,102,255:32,0 chr1 185963947 . T . PASS END=185963951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 185963952 . C . PASS END=185964196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:28:0,81,1215:0,84,255:40,0 chr1 185964197 . A . PASS END=185964209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,60,255:24,0 chr1 185964210 . C . PASS END=185964219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:20:0,46,668:0,46,255:19,0 chr1 185966561 . A . PASS END=185966656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:59:0,120,1800:0,177,255:40,0 chr1 185969177 . G . PASS END=185969367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,1078:0,84,255:40,0 chr1 185969368 . C . PASS END=185969371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,80,255:24,0 chr1 185970430 . T . PASS END=185970560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:50:0,116,1800:0,116,255:40,0 chr1 185970566 . T . PASS END=185970566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 185970726 . G . PASS END=185970873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:37:0,84,1260:0,90,255:40,0 chr1 185970884 . C . PASS END=185970884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:21,0 chr1 185972850 . T . PASS END=185972971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:32:0,93,1172:0,96,255:40,0 chr1 185972972 . G . PASS END=185972972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:35,0 chr1 185972973 . G . PASS END=185972976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:36,0 chr1 185976260 . G . PASS END=185976414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,3:64:83:36:0,83,1359:0,83,255:40,0 chr1 185984291 . T . PASS END=185984479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:94:37:0,94,1236:0,94,255:40,0 chr1 185984480 . G . PASS END=185984516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,105,1723:0,105,255:40,0 chr1 185984517 . T C, 47.68 PASS DP=48;MQ=250.00;MQRankSum=5.845;ReadPosRankSum=2.143;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,20,0:0.417,0.000:48:17,13,0:11,7,0:47:82,0,50,715,965,1680:255,0,255:28,0:4.7680e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,20,9,11:15,13,14,6 chr1 185984518 . G . PASS END=185984554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:42:0,96,1512:0,96,255:40,0 chr1 185984555 . A . PASS END=185984569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:40:0,96,1440:0,120,255:40,0 chr1 185985076 . A . PASS END=185985076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 185985090 . T . PASS END=185985091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1019:0,76,255:27,0 chr1 185985092 . C . PASS END=185985092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 185985093 . C . PASS END=185985093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:26,0 chr1 185985094 . T . PASS END=185985096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 185985097 . A . PASS END=185985098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,89,255:26,0 chr1 185985099 . T . PASS END=185985100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 185985101 . A . PASS END=185985101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 185985102 . T . PASS END=185985102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 185985103 . T . PASS END=185985103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 185985104 . G . PASS END=185985360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:30:0,81,1192:0,83,255:40,0 chr1 185985361 . T . PASS END=185985365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr1 185985366 . T . PASS END=185985367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 185985368 . T . PASS END=185985371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:25,0 chr1 185986095 . T . PASS END=185986203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:41:0,93,1395:0,110,255:40,0 chr1 185986210 . G . PASS END=185986210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr1 185987315 . G . PASS END=185987315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 185987316 . T . PASS END=185987316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 185987317 . G . PASS END=185987484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,1016:0,81,255:40,0 chr1 185988673 . T . PASS END=185988673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 185988674 . T . PASS END=185988682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,935:0,70,255:28,0 chr1 185988683 . A . PASS END=185988688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,999:0,90,255:30,0 chr1 185988689 . G . PASS END=185988689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 185988690 . T . PASS END=185988700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1202:0,86,255:32,0 chr1 185988701 . T . PASS END=185988701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 185988702 . T . PASS END=185988807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:34:0,83,1222:0,83,255:40,0 chr1 185988808 . C . PASS END=185988824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:22,0 chr1 185988825 . A . PASS END=185988827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 185992162 . A . PASS END=185992273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:34:0,90,1301:0,95,255:40,0 chr1 185992274 . T . PASS END=185992274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:30,0 chr1 185992275 . G . PASS END=185992276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr1 185992277 . A . PASS END=185992285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:30:0,63,945:0,90,255:25,0 chr1 186007066 . A . PASS END=186007167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,120,1800:0,125,255:40,0 chr1 186007949 . T . PASS END=186007949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1229:0,102,255:34,0 chr1 186007960 . G . PASS END=186008137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:30:0,81,1215:0,90,255:40,0 chr1 186008860 . T . PASS END=186008860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1117:0,47,255:32,0 chr1 186008861 . G . PASS END=186009011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:34:0,90,1280:0,90,255:40,0 chr1 186010145 . G . PASS END=186010146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1310:0,92,255:36,0 chr1 186010147 . T . PASS END=186010147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1262:0,78,255:38,0 chr1 186010148 . C . PASS END=186010268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:39:0,93,1393:0,102,255:40,0 chr1 186014820 . T . PASS END=186014982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:91:36:0,91,1311:0,91,255:40,0 chr1 186014983 . A . PASS END=186014983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:30,0 chr1 186014984 . A . PASS END=186014985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 186014986 . T . PASS END=186014986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:29,0 chr1 186014987 . G . PASS END=186014987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1089:0,82,255:30,0 chr1 186014988 . T . PASS END=186014988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:29,0 chr1 186014989 . G . PASS END=186014989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 186014990 . T . PASS END=186014990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:29,0 chr1 186014991 . T . PASS END=186014995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 186017875 . A . PASS END=186017971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,116,1582:0,116,255:40,0 chr1 186022084 . T . PASS END=186022206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:37:0,81,1279:0,81,255:40,0 chr1 186022953 . G . PASS END=186022953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1434:0,111,255:37,0 chr1 186022957 . G . PASS END=186023104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:38:0,87,1305:0,101,255:40,0 chr1 186023105 . T . PASS END=186023105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1283:0,51,255:27,0 chr1 186023106 . C . PASS END=186023118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,95,255:33,0 chr1 186024525 . T . PASS END=186024530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1186:0,96,255:34,0 chr1 186024531 . C . PASS END=186024532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 186024533 . A . PASS END=186024541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1360:0,108,255:38,0 chr1 186024542 . A . PASS END=186024542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:36,0 chr1 186024543 . A . PASS END=186024569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1446:0,101,255:40,0 chr1 186024570 . T C, 49.64 PASS DP=47;MQ=250.00;MQRankSum=5.852;ReadPosRankSum=2.228;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,22,0:0.468,0.000:47:12,13,0:13,9,0:48:84,0,50,758,865,1623:255,0,255:25,0:4.9639e+01,6.8857e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,14,15,7:12,13,14,8 chr1 186024571 . T . PASS END=186024607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,129,255:40,0 chr1 186024608 . G . PASS END=186024806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:44:0,114,1710:0,132,255:40,0 chr1 186026366 . C . PASS END=186026436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,113,1512:0,113,255:40,0 chr1 186026437 . T . PASS END=186026473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:67:0,120,1800:0,177,255:40,0 chr1 186026474 . T C, 42.28 PASS DP=71;MQ=250.00;MQRankSum=6.916;ReadPosRankSum=5.183;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,25,0:0.352,0.000:71:17,11,0:29,14,0:42:77,0,50,877,1635,2511:255,0,255:38,0:4.2283e+01,2.7854e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,30,12,13:27,19,12,13 chr1 186026475 . A . PASS END=186026511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,143,255:40,0 chr1 186026512 . A . PASS END=186026533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:35:0,93,1395:0,105,255:40,0 chr1 186030983 . G . PASS END=186031003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,105,1723:0,105,255:40,0 chr1 186031004 . T . PASS END=186031040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,138,255:40,0 chr1 186031041 . C T, 50.00 PASS DP=65;MQ=249.41;MQRankSum=6.047;ReadPosRankSum=0.249;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,34,0:0.531,0.000:64:15,17,0:15,17,0:48:85,0,50,1182,948,2131:255,0,255:28,0:5.0000e+01,6.7563e-05,5.2553e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,19,15:15,15,20,14 chr1 186031042 . G . PASS END=186031078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,122,255:40,0 chr1 186031079 . T . PASS END=186031096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,143,255:40,0 chr1 186031111 . T . PASS END=186031111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1568:0,116,255:39,0 chr1 186031646 . T . PASS END=186031732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,170,255:40,0 chr1 186034370 . G . PASS END=186034375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 186034376 . C . PASS END=186034376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 186034377 . A . PASS END=186034395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:65:22:0,65,778:0,65,255:26,0 chr1 186034396 . C . PASS END=186034396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 186034397 . A . PASS END=186034399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 186034400 . A . PASS END=186034537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:31:0,88,1211:0,88,255:40,0 chr1 186034538 . G . PASS END=186034544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,96,255:26,0 chr1 186034545 . C . PASS END=186034548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:31:0,54,810:0,93,255:18,0 chr1 186034549 . C . PASS END=186034552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:20,0 chr1 186034553 . A . PASS END=186034555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:18,0 chr1 186034556 . T . PASS END=186034558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:17,0 chr1 186034559 . T . PASS END=186034561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:17,0 chr1 186036966 . T . PASS END=186036966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 186036967 . A . PASS END=186036979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:30:0,90,1022:0,90,255:38,0 chr1 186036980 . G . PASS END=186036980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:37,0 chr1 186036981 . C . PASS END=186037121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:35:0,87,1333:0,87,255:40,0 chr1 186037122 . A . PASS END=186037122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1111:0,75,255:31,0 chr1 186037123 . T . PASS END=186037129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1197:0,88,255:33,0 chr1 186037130 . A . PASS END=186037130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1141:0,72,255:29,0 chr1 186037131 . T . PASS END=186037136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,88,255:31,0 chr1 186037137 . C . PASS END=186037137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:31,0 chr1 186037138 . A . PASS END=186037139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1150:0,85,255:31,0 chr1 186038795 . G . PASS END=186038908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:44:0,93,1395:0,119,255:40,0 chr1 186039744 . T . PASS END=186039874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:39:0,84,1260:0,84,255:40,0 chr1 186039875 . T . PASS END=186039885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:69:30:0,69,1035:0,73,255:26,0 chr1 186039886 . A . PASS END=186039889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:26:0,57,855:0,78,255:19,0 chr1 186039896 . C . PASS END=186039896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 186043873 . C . PASS END=186044023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:62:0,120,1800:0,162,255:40,0 chr1 186045560 . T . PASS END=186045561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1294:0,89,255:33,0 chr1 186045562 . C . PASS END=186045562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 186045563 . C . PASS END=186045569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 186045570 . T . PASS END=186045570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1160:0,74,255:33,0 chr1 186045571 . T . PASS END=186045711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:35:0,90,1291:0,90,255:40,0 chr1 186045712 . G . PASS END=186045712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1520:0,77,255:39,0 chr1 186045713 . G . PASS END=186045713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 186045714 . C . PASS END=186045714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1504:0,77,255:37,0 chr1 186045715 . C . PASS END=186045736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:36:0,92,1252:0,92,255:38,0 chr1 186045737 . A . PASS END=186045737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1218:0,61,255:29,0 chr1 186045738 . A . PASS END=186045742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,91,255:29,0 chr1 186045743 . T . PASS END=186045743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:27,0 chr1 186045744 . G . PASS END=186045754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 186045768 . C . PASS END=186045768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 186047239 . G . PASS END=186047352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,104,1413:0,104,255:40,0 chr1 186050325 . C . PASS END=186050325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 186050339 . T . PASS END=186050346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 186050347 . A . PASS END=186050359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,784:0,66,255:25,0 chr1 186050360 . C . PASS END=186050360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:23,0 chr1 186050361 . A . PASS END=186050365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,902:0,75,255:26,0 chr1 186050366 . G . PASS END=186050379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,978:0,81,255:36,0 chr1 186050380 . G . PASS END=186050416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1327:0,87,255:40,0 chr1 186050417 . A G, 49.63 PASS DP=43;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=2.471;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,20,0:0.465,0.000:43:12,7,0:11,13,0:48:84,0,50,707,786,1493:255,0,255:22,0:4.9631e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,10,10:13,10,7,13 chr1 186050418 . G . PASS END=186050454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,117,1784:0,117,255:40,0 chr1 186050455 . T . PASS END=186050497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1305:0,93,255:40,0 chr1 186050498 . A . PASS END=186050521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:24:0,63,894:0,64,255:26,0 chr1 186050522 . T . PASS END=186050522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 186050523 . G . PASS END=186050523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 186050524 . C . PASS END=186050526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 186051997 . A . PASS END=186052093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:37:0,96,1335:0,97,255:40,0 chr1 186055378 . T . PASS END=186055408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:37:0,95,1363:0,95,255:40,0 chr1 186055409 . A . PASS END=186055471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:43:0,96,1518:0,96,255:40,0 chr1 186055472 . T . PASS END=186055472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1459:0,74,255:36,0 chr1 186055473 . C . PASS END=186055492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,105,255:35,0 chr1 186055493 . G . PASS END=186055493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:26,0 chr1 186055494 . A . PASS END=186055499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:27,0 chr1 186055500 . C . PASS END=186055513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:23,0 chr1 186055514 . G . PASS END=186055525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 186055526 . T . PASS END=186055534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,41,255:13,0 chr1 186055535 . G . PASS END=186055535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 186055536 . C . PASS END=186055539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr1 186056337 . A . PASS END=186056337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr1 186056349 . G . PASS END=186056462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,140,255:40,0 chr1 186056575 . T . PASS END=186056777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:33:0,87,1305:0,99,255:40,0 chr1 186057064 . G . PASS END=186057143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:61:0,120,1800:0,183,255:40,0 chr1 186057144 . T . PASS END=186057145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:95:0,120,1800:0,255,255:40,0 chr1 186057267 . T . PASS END=186057267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,163,255:40,0 chr1 186057277 . T . PASS END=186057339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:59:0,120,1800:0,164,255:40,0 chr1 186057340 . C . PASS END=186057376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,141,255:40,0 chr1 186057377 . G A, 50.00 PASS DP=57;MQ=250.00;MQRankSum=6.425;ReadPosRankSum=1.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,32,0:0.561,0.000:57:11,14,0:14,18,0:46:85,0,46,185,185,185:255,0,255:21,0:5.0000e+01,1.0018e-04,4.8837e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,19,11,21:12,13,11,21 chr1 186057378 . A . PASS END=186057408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:42:0,96,1440:0,113,255:40,0 chr1 186057738 . A . PASS END=186057742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 186057743 . T . PASS END=186057887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,102,1530:0,124,255:40,0 chr1 186059890 . T . PASS END=186060031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,90,255:40,0 chr1 186060032 . T . PASS END=186060049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr1 186062266 . A . PASS END=186062371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,157,255:40,0 chr1 186062372 . T . PASS END=186062390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,148,255:40,0 chr1 186062618 . T . PASS END=186062766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:40:0,84,1260:0,104,255:40,0 chr1 186062767 . C . PASS END=186062776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:29:0,71,1047:0,71,255:26,0 chr1 186062777 . T . PASS END=186062777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr1 186062778 . A . PASS END=186062796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 186062797 . A . PASS END=186062797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 186062798 . T . PASS END=186062801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 186063408 . G . PASS END=186063505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,129,255:40,2 chr1 186064375 . C . PASS END=186064378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1316:0,92,255:36,0 chr1 186064379 . A . PASS END=186064379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 186064380 . C . PASS END=186064643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:36:0,93,1283:0,100,255:40,0 chr1 186064644 . A . PASS END=186064645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,108,255:20,0 chr1 186064646 . G . PASS END=186064647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:57:36:0,57,855:0,108,255:19,0 chr1 186064648 . T . PASS END=186064648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:20,0 chr1 186064649 . C . PASS END=186064653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:45:33:0,45,675:0,83,255:19,0 chr1 186072604 . A . PASS END=186072768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:38:0,84,1260:0,109,255:40,0 chr1 186072769 . G . PASS END=186072792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,942:0,65,255:26,0 chr1 186072793 . C . PASS END=186072800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:26:0,48,720:0,78,255:18,0 chr1 186076016 . G . PASS END=186076097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:53:0,120,1800:0,143,255:40,0 chr1 186077593 . T . PASS END=186077596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 186077597 . T . PASS END=186077729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:30:0,86,1058:0,86,255:40,0 chr1 186081944 . G . PASS END=186081955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,138,255:40,0 chr1 186081956 . G . PASS END=186082085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:41:0,84,1260:0,119,255:40,0 chr1 186083111 . T . PASS END=186083116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 186083117 . C . PASS END=186083117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 186083118 . A . PASS END=186083134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,911:0,64,255:28,0 chr1 186083135 . C . PASS END=186083139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 186083140 . A . PASS END=186083140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1037:0,63,255:28,0 chr1 186083141 . G . PASS END=186083141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 186083142 . C . PASS END=186083143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:30:0,60,1078:0,60,255:29,0 chr1 186083144 . T . PASS END=186083147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 186083148 . A . PASS END=186083149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 186083150 . T . PASS END=186083150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 186083151 . T . PASS END=186083151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1070:0,62,255:29,0 chr1 186083152 . C . PASS END=186083160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr1 186083161 . A . PASS END=186083161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:30,0 chr1 186083162 . A . PASS END=186083165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 186083166 . A . PASS END=186083167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 186083168 . C . PASS END=186083172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1127:0,96,255:34,0 chr1 186083173 . T . PASS END=186083173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:31,0 chr1 186083174 . T . PASS END=186083176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1172:0,85,255:33,0 chr1 186083177 . A . PASS END=186083177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:31,0 chr1 186083178 . A . PASS END=186083196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:32,0 chr1 186083197 . C . PASS END=186083197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:27,0 chr1 186083198 . C . PASS END=186083211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 186083212 . A . PASS END=186083212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 186083213 . C . PASS END=186083214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 186083215 . T . PASS END=186083215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 186083216 . G . PASS END=186083222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 186083223 . G . PASS END=186083223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 186083224 . G . PASS END=186083227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 186083228 . G . PASS END=186083228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 186083229 . A . PASS END=186083229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:23,0 chr1 186083230 . G . PASS END=186083243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:24:0,63,945:0,64,255:24,0 chr1 186083244 . G . PASS END=186083244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 186083245 . A . PASS END=186083250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 186083251 . G . PASS END=186083255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,50,255:18,0 chr1 186083951 . A . PASS END=186083957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 186083958 . A . PASS END=186083958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 186083959 . T . PASS END=186083959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 186083960 . C . PASS END=186083971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr1 186083972 . A . PASS END=186083972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 186083973 . T . PASS END=186084078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,1103:0,90,255:40,0 chr1 186084089 . G . PASS END=186084089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 186084390 . T . PASS END=186084546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:41:0,99,1543:0,99,255:40,0 chr1 186086126 . G . PASS END=186086247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:40:0,84,1260:0,107,255:40,0 chr1 186086591 . T . PASS END=186086615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:33:0,98,1271:0,98,255:40,0 chr1 186086616 . T . PASS END=186086747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:31:0,81,1215:0,93,255:40,1 chr1 186086748 . G . PASS END=186086755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,63,255:26,0 chr1 186088323 . G . PASS END=186088430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:40:0,89,1490:0,89,255:40,0 chr1 186088877 . A . PASS END=186089014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:31:0,93,1058:0,93,255:40,0 chr1 186089143 . G . PASS END=186089149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 186089150 . C . PASS END=186089267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1109:0,80,255:40,0 chr1 186089268 . A . PASS END=186089268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 186089269 . A . PASS END=186089273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 186089274 . C . PASS END=186089277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,76,255:22,0 chr1 186092083 . T . PASS END=186092113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:97:41:0,97,1661:0,97,255:40,0 chr1 186092114 . A . PASS END=186092343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:31:0,84,1260:0,93,255:40,0 chr1 186092344 . C . PASS END=186092352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,70,255:24,0 chr1 186094736 . T . PASS END=186094736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 186094737 . A . PASS END=186094737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 186094738 . C . PASS END=186094926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:81:27:0,81,936:0,81,255:40,0 chr1 186097210 . C . PASS END=186097216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 186097217 . A . PASS END=186097217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 186097218 . T . PASS END=186097218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 186097219 . T . PASS END=186097423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:28:0,81,1215:0,84,255:40,0 chr1 186099098 . C . PASS END=186099232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:40:0,81,1215:0,109,255:40,0 chr1 186099639 . A . PASS END=186099648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,923:0,64,255:26,0 chr1 186099649 . C . PASS END=186099669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,940:0,84,255:34,0 chr1 186099670 . T . PASS END=186099670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr1 186099671 . A . PASS END=186099824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:35:0,89,1279:0,89,255:40,0 chr1 186099825 . C . PASS END=186099829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:37:0,69,1035:0,78,255:24,0 chr1 186099838 . C . PASS END=186099838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 186101448 . T . PASS END=186101448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 186101460 . A . PASS END=186101501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,104,1800:0,104,255:40,0 chr1 186101502 . G . PASS END=186101538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,150,255:40,0 chr1 186101539 . A G, 49.89 PASS DP=50;MQ=250.00;MQRankSum=6.049;ReadPosRankSum=4.748;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,24,0:0.480,0.000:50:13,15,0:13,9,0:48:85,0,50,850,901,1752:255,0,255:24,0:4.9893e+01,6.6269e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,12,12:17,9,15,9 chr1 186101540 . A . PASS END=186101541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,119,1716:0,119,255:40,0 chr1 186105800 . G . PASS END=186106066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:30:0,84,1042:0,90,255:40,1 chr1 186106067 . A . PASS END=186106069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:78:44:0,78,1170:0,116,255:26,0 chr1 186106080 . T . PASS END=186106080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 186106630 . T . PASS END=186106641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 186106642 . T . PASS END=186106650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:22,0 chr1 186106651 . G . PASS END=186106797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1023:0,81,255:40,0 chr1 186106798 . C . PASS END=186106800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:37:0,78,1170:0,111,255:26,0 chr1 186106934 . T . PASS END=186107100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:33:0,81,1215:0,99,255:40,0 chr1 186107101 . C . PASS END=186107104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:31:0,66,990:0,82,255:24,0 chr1 186113295 . G . PASS END=186113295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 186113305 . T . PASS END=186113305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 186113306 . T . PASS END=186113309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 186113310 . G . PASS END=186113310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 186113311 . G . PASS END=186113322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr1 186113323 . C . PASS END=186113348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1035:0,84,255:30,0 chr1 186113349 . G . PASS END=186113350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:31:0,63,1132:0,63,255:29,0 chr1 186113351 . A . PASS END=186113383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1066:0,82,255:35,0 chr1 186113384 . A . PASS END=186113384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1191:0,77,255:34,0 chr1 186113385 . C . PASS END=186113385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 186113386 . T . PASS END=186113386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1028:0,71,255:33,0 chr1 186113387 . T . PASS END=186113404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:35:0,80,1228:0,80,255:36,0 chr1 186113405 . A . PASS END=186113405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 186113406 . G . PASS END=186113426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1205:0,87,255:34,0 chr1 186113427 . G . PASS END=186113427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 186113428 . A . PASS END=186113431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 186113432 . A . PASS END=186113447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,930:0,62,255:26,0 chr1 186113448 . C . PASS END=186113451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 186113452 . T . PASS END=186113461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:26,0 chr1 186113462 . A . PASS END=186113465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,65,255:19,0 chr1 186113466 . A . PASS END=186113467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 186113468 . T . PASS END=186113470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr1 186113471 . T . PASS END=186113471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr1 186113472 . C . PASS END=186113473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 186113474 . A . PASS END=186113474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 186113475 . A . PASS END=186113475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 186113665 . T . PASS END=186113835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:33:0,89,1190:0,89,255:40,0 chr1 186114535 . C . PASS END=186114550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 186114551 . T . PASS END=186114551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr1 186114552 . C . PASS END=186114552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 186114553 . C . PASS END=186114598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,771:0,65,255:26,0 chr1 186114599 . G . PASS END=186114666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1166:0,84,255:36,0 chr1 186114667 . A . PASS END=186114667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1279:0,64,255:33,0 chr1 186114668 . C . PASS END=186114705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:36,0 chr1 186114711 . C . PASS END=186114711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 186114885 . T . PASS END=186114888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 186114889 . T . PASS END=186114890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 186114891 . G . PASS END=186114900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 186114901 . A . PASS END=186114901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 186114902 . A . PASS END=186114907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 186114908 . C . PASS END=186114908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 186114909 . A . PASS END=186115036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:31:0,86,1218:0,86,255:40,0 chr1 186115037 . A . PASS END=186115055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:25:0,63,945:0,75,255:25,0 chr1 186115069 . T . PASS END=186115069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 186120321 . T . PASS END=186120321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,918:0,84,255:28,0 chr1 186120332 . G . PASS END=186120481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:48:0,120,1800:0,128,255:40,0 chr1 186120738 . G . PASS END=186120875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:40:0,96,1389:0,96,255:40,0 chr1 186120883 . T . PASS END=186120883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 186121882 . G . PASS END=186122003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:94:37:0,94,1167:0,94,255:40,0 chr1 186122010 . T . PASS END=186122010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 186122882 . G . PASS END=186123119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:33:0,97,1241:0,97,255:40,0 chr1 186134243 . G . PASS END=186134305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:33:0,85,1168:0,85,255:40,0 chr1 186135309 . C . PASS END=186135309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 186135316 . A . PASS END=186135316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr1 186135317 . T . PASS END=186135327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:34,0 chr1 186135328 . G . PASS END=186135328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:32,0 chr1 186135329 . T . PASS END=186135329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1158:0,53,255:33,0 chr1 186135330 . G . PASS END=186135412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:36:0,87,1258:0,87,255:40,0 chr1 186135413 . T . PASS END=186135413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:32,0 chr1 186135414 . G . PASS END=186135435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1150:0,85,255:34,0 chr1 186135448 . C . PASS END=186135448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 186135931 . C . PASS END=186135931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 186135940 . A . PASS END=186135941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 186135942 . A . PASS END=186136074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1040:0,87,255:40,0 chr1 186140469 . A . PASS END=186140582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:36:0,105,1435:0,107,255:40,0 chr1 186141131 . T . PASS END=186141131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 186141138 . A . PASS END=186141139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 186141140 . G . PASS END=186141143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 186141144 . A . PASS END=186141144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,960:0,70,255:28,0 chr1 186141145 . C . PASS END=186141161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1078:0,83,255:33,0 chr1 186141162 . T . PASS END=186141162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:32,0 chr1 186141163 . A . PASS END=186141263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:39:0,99,1352:0,99,255:40,0 chr1 186143646 . A . PASS END=186143774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:37:0,93,1266:0,93,255:40,0 chr1 186147548 . A . PASS END=186147549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 186147550 . A . PASS END=186147555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 186147556 . G . PASS END=186147556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 186147557 . A . PASS END=186147559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1066:0,90,255:31,0 chr1 186147560 . G . PASS END=186147560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:30,0 chr1 186147561 . T . PASS END=186147747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:32:0,83,1164:0,83,255:40,0 chr1 186147748 . T . PASS END=186147748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1320:0,68,255:37,0 chr1 186147749 . A . PASS END=186147874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:39:0,88,1354:0,88,255:40,0 chr1 186147875 . A . PASS END=186147875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:33,0 chr1 186147876 . G . PASS END=186147889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:30:0,84,1260:0,89,255:34,0 chr1 186147890 . C . PASS END=186147898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:26,0 chr1 186151291 . C . PASS END=186151291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 186151300 . A . PASS END=186151419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,123,255:40,0 chr1 186151431 . T . PASS END=186151431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr1 186157015 . A . PASS END=186157122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:38:0,86,1188:0,86,255:40,0 chr1 186157123 . A . PASS END=186157123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:32,0 chr1 186157124 . A . PASS END=186157139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1233:0,89,255:33,0 chr1 186157140 . G . PASS END=186157141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 186158644 . G . PASS END=186159010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:96:33:0,96,1211:0,99,255:40,0 chr1 186159028 . A . PASS END=186159028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 186159102 . A . PASS END=186159102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 186159233 . A . PASS END=186159233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 186159244 . G . PASS END=186159244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 186159337 . C . PASS END=186159337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 186159406 . T . PASS END=186159406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 186159428 . A . PASS END=186159428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1560:0,118,255:39,0 chr1 186159598 . T . PASS END=186159598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 186159664 . G . PASS END=186159664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 186159679 . A . PASS END=186159679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 186159699 . G . PASS END=186159699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:47:0,93,1395:0,141,255:31,0 chr1 186159882 . C . PASS END=186159882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 186159894 . C . PASS END=186159894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,144,255:40,0 chr1 186159912 . G . PASS END=186159912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 186159937 . T . PASS END=186159937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,178,255:40,0 chr1 186159992 . T . PASS END=186159992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 186266008 . A . PASS END=186266083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,133,255:40,0 chr1 186269223 . A . PASS END=186269345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:35:0,99,1485:0,105,255:40,0 chr1 186270724 . A . PASS END=186270843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,112,1717:0,112,255:40,0 chr1 186273240 . T . PASS END=186273389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:59:0,120,1800:0,172,255:40,0 chr1 186273926 . A . PASS END=186273956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:37:0,88,1380:0,88,255:40,0 chr1 186273957 . C . PASS END=186273993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:85:54:0,85,1746:0,85,255:40,0 chr1 186273994 . C T, 41.01 PASS DP=60;MQ=249.71;MQRankSum=6.237;ReadPosRankSum=4.540;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,20,0:0.339,0.000:59:14,12,0:25,8,0:41:76,0,50,686,1321,2007:255,0,255:37,0:4.1008e+01,3.6604e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,22,8,12:16,23,12,8 chr1 186273995 . G . PASS END=186274031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,119,1800:0,119,255:40,0 chr1 186274032 . A . PASS END=186274054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,124,255:40,0 chr1 186275450 . T . PASS END=186276177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:91:44:0,91,1621:0,91,255:40,1 chr1 186276178 . C . PASS END=186276178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:73:56:0,73,1635:0,73,255:40,0 chr1 186276179 . C . PASS END=186276197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,101,1560:0,101,255:40,0 chr1 186276198 . G . PASS END=186276198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,6:57:49:57:0,49,1668:0,49,255:40,0 chr1 186276199 . G . PASS END=186276215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,102,1800:0,102,255:40,0 chr1 186276216 . T . PASS END=186276216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,7:58:21:58:0,21,1653:0,21,255:40,0 chr1 186276217 . C . PASS END=186276217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,3:58:79:58:0,79,1785:0,79,255:40,0 chr1 186276218 . C . PASS END=186276247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:82:50:0,82,1603:0,82,255:40,0 chr1 186276248 . A . PASS END=186276248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:63:57:0,63,1886:0,63,255:40,0 chr1 186276249 . G . PASS END=186276291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:53:0,106,1800:0,106,255:40,1 chr1 186276292 . G . PASS END=186276292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,4:65:70:65:0,70,2068:0,70,255:40,0 chr1 186276293 . A . PASS END=186276305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:63:0,120,1800:0,137,255:40,0 chr1 186276306 . T . PASS END=186276307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:70:63:0,70,1869:0,70,255:40,0 chr1 186276308 . C . PASS END=186276333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,3:67:89:61:0,89,1800:0,89,255:40,0 chr1 186276334 . C . PASS END=186276334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,4:67:54:67:0,54,2120:0,54,255:40,0 chr1 186276335 . C . PASS END=186276385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,4:69:86:63:0,86,1800:0,86,255:40,0 chr1 186276386 . A . PASS END=186276386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,5:70:68:70:0,68,1936:0,68,255:40,0 chr1 186276387 . G . PASS END=186276399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:68:0,101,1800:0,101,255:40,0 chr1 186276400 . A . PASS END=186276400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:77:68:0,77,2156:0,77,255:40,0 chr1 186276401 . C . PASS END=186276408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:68:0,102,1800:0,102,255:40,0 chr1 186276409 . A . PASS END=186276409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,7:70:72:70:0,72,2222:0,72,255:40,0 chr1 186276410 . A . PASS END=186276438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:86:63:0,86,1800:0,86,255:40,0 chr1 186276439 . G . PASS END=186276439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,4:65:70:65:0,70,2127:0,70,255:40,0 chr1 186276440 . C . PASS END=186276507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:80:55:0,80,1726:0,80,255:40,1 chr1 186276508 . T . PASS END=186276508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:77:55:0,77,1714:0,77,255:40,0 chr1 186276509 . C . PASS END=186276509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:56:0,120,1800:0,135,255:40,0 chr1 186276510 . A . PASS END=186276510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:63:56:0,63,1745:0,63,255:40,0 chr1 186276511 . C . PASS END=186276512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,135,255:40,0 chr1 186276513 . C . PASS END=186276513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:74:56:0,74,1841:0,74,255:40,0 chr1 186276514 . A . PASS END=186276525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:94:56:0,94,1787:0,94,255:40,0 chr1 186276526 . G . PASS END=186276526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:75:60:0,75,1771:0,75,255:40,0 chr1 186276527 . A . PASS END=186276580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:50:0,81,1636:0,81,255:40,0 chr1 186276581 . C . PASS END=186276581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:62:50:0,62,1598:0,62,255:40,0 chr1 186276582 . C . PASS END=186276582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:6:50:0,6,1413:0,6,255:40,0 chr1 186276583 . C . PASS END=186276623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:80:43:0,80,1421:0,80,255:40,0 chr1 186276624 . A . PASS END=186276624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1396:0,57,255:33,0 chr1 186276625 . C . PASS END=186276628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:40:0,90,1402:0,90,255:36,0 chr1 186276629 . C . PASS END=186276629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1343:0,73,255:34,0 chr1 186276630 . A . PASS END=186276632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1277:0,81,255:35,0 chr1 186276633 . C . PASS END=186276633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:14:39:0,14,1165:0,14,255:32,0 chr1 186276634 . A . PASS END=186276634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1186:0,64,255:33,0 chr1 186276635 . C . PASS END=186276635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 186276636 . C . PASS END=186276636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1242:0,59,255:33,0 chr1 186276637 . A . PASS END=186276651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1236:0,94,255:36,0 chr1 186276652 . G . PASS END=186276652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:32,0 chr1 186276653 . C . PASS END=186276653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1410:0,98,255:32,0 chr1 186276654 . A . PASS END=186276654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:53:38:0,53,1282:0,53,255:30,0 chr1 186276655 . C . PASS END=186276656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:85:34:0,85,1196:0,85,255:31,0 chr1 186276657 . C . PASS END=186276657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1103:0,25,255:30,0 chr1 186276658 . A . PASS END=186276659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:32,0 chr1 186276660 . C . PASS END=186276660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:24,0 chr1 186276661 . A G, 49.46 PASS DP=30;MQ=189.13;MQRankSum=-0.644;ReadPosRankSum=0.644;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:11,9,0:5,5,0:48:84,0,50,349,535,884:255,0,255:14,0:4.9457e+01,7.0928e-05,5.3000e+01,3.4870e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,14,4,10:5,11,7,7 chr1 186276662 . C . PASS END=186276672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:25:0,60,945:0,60,255:25,0 chr1 186276673 . C . PASS END=186276673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:19,0 chr1 186276674 . C . PASS END=186276674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr1 186276675 . T . PASS END=186276675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 186276676 . G . PASS END=186276694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:19,0 chr1 186276695 . A . PASS END=186276695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:16,0 chr1 186276696 . G . PASS END=186276696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 186276697 . A . PASS END=186276697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:13,0 chr1 186276698 . C . PASS END=186276698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 186276699 . T . PASS END=186276707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 186276708 . C . PASS END=186276717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 186276718 . A . PASS END=186276749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 186276750 . A . PASS END=186276753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 186276754 . A . PASS END=186276757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 186276758 . C . PASS END=186276776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,227:6,0 chr1 186276777 . C . PASS END=186276781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 186276782 . C . PASS END=186276800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,405:0,33,255:13,0 chr1 186276801 . C . PASS END=186276803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 186276804 . C . PASS END=186276805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 186276806 . C . PASS END=186276809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 186276810 . T . PASS END=186276810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 186276811 . G . PASS END=186276820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 186276821 . C . PASS END=186276821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 186276822 . A . PASS END=186276838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,551:0,45,255:18,0 chr1 186276839 . A . PASS END=186276839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:17,0 chr1 186276840 . G . PASS END=186276855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,645:0,44,255:19,0 chr1 186276856 . C . PASS END=186276868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:22,0 chr1 186276869 . C . PASS END=186276869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 186276870 . T . PASS END=186276874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,892:0,69,255:25,0 chr1 186276875 . A . PASS END=186276875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 186276876 . C . PASS END=186276877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 186276878 . C . PASS END=186276884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 186276885 . G . PASS END=186276885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 186276886 . G . PASS END=186276888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 186276889 . C . PASS END=186276889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:25,0 chr1 186276890 . C . PASS END=186276891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 186276892 . G . PASS END=186276892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 186276893 . C . PASS END=186276895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 186276896 . C . PASS END=186276896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,966:0,56,255:27,0 chr1 186276897 . A . PASS END=186276899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,86,255:28,0 chr1 186276900 . T . PASS END=186276900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 186276901 . A . PASS END=186276901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr1 186276902 . C . PASS END=186276902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 186276903 . C . PASS END=186276903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 186276904 . C . PASS END=186276917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:32,0 chr1 186276918 . T . PASS END=186276918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:30,0 chr1 186276919 . C . PASS END=186276922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,91,255:31,0 chr1 186276923 . C . PASS END=186276923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1175:0,69,255:30,0 chr1 186276924 . T . PASS END=186276924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 186276925 . A . PASS END=186276925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1141:0,58,255:29,0 chr1 186276926 . C . PASS END=186276963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1117:0,82,255:31,0 chr1 186276964 . G . PASS END=186276964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:31,0 chr1 186276965 . C . PASS END=186276966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 186276967 . C . PASS END=186276967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr1 186276968 . C . PASS END=186276983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1236:0,92,255:37,0 chr1 186276984 . G . PASS END=186276984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:31,0 chr1 186276985 . A . PASS END=186276993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1319:0,95,255:35,0 chr1 186276994 . A . PASS END=186276994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:6:40:0,6,1050:0,6,255:30,0 chr1 186276995 . C . PASS END=186277003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1327:0,84,255:36,0 chr1 186277004 . A . PASS END=186277004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1268:0,70,255:34,0 chr1 186277005 . G . PASS END=186277017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:81:39:0,81,1327:0,81,255:38,0 chr1 186277018 . A . PASS END=186277018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1351:0,73,255:36,0 chr1 186277019 . C . PASS END=186277050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1275:0,90,255:37,0 chr1 186277051 . G . PASS END=186277087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1159:0,91,255:36,0 chr1 186277088 . G C, 167.39 PASS DP=40;MQ=117.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,22,0:0,18,0:117:205,120,0,1543,120,1543:255,120,0:0,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,19:0,0,19,21 chr1 186277089 . T . PASS END=186277125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,88,255:40,0 chr1 186277126 . C . PASS END=186277126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:37,0 chr1 186277127 . C . PASS END=186277274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:36:0,81,1140:0,81,255:40,0 chr1 186277275 . G . PASS END=186277275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1268:0,72,255:36,0 chr1 186277276 . G . PASS END=186277276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1197:0,56,255:34,0 chr1 186277277 . G . PASS END=186277280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:95:37:0,95,1327:0,95,255:36,0 chr1 186277281 . C . PASS END=186277281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:35,0 chr1 186277282 . A . PASS END=186277287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1374:0,101,255:37,0 chr1 186277288 . A . PASS END=186277288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1315:0,78,255:36,0 chr1 186277289 . C . PASS END=186277344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:38:0,84,1300:0,84,255:40,0 chr1 186277345 . A . PASS END=186277345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:37,0 chr1 186277346 . A . PASS END=186277431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:36:0,93,1176:0,95,255:37,0 chr1 186277432 . A . PASS END=186277432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1021:0,74,255:32,0 chr1 186277433 . C . PASS END=186277951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:93:36:0,93,1296:0,95,255:40,0 chr1 186277952 . C . PASS END=186277988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,147,255:40,2 chr1 186277989 . A G, 48.67 PASS DP=73;MQ=250.00;MQRankSum=7.288;ReadPosRankSum=4.353;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,32,0:0.438,0.000:73:22,17,0:19,15,0:47:83,0,50,1144,1466,2611:255,0,255:38,0:4.8674e+01,8.0765e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,21,17,15:21,20,18,14 chr1 186277990 . A . PASS END=186278026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:71:0,120,1800:0,152,255:40,0 chr1 186278027 . T . PASS END=186278250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:80:32:0,80,1260:0,80,255:40,0 chr1 186278251 . A . PASS END=186278272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:25,0 chr1 186278925 . A . PASS END=186279002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,120,1800:0,141,255:40,0 chr1 186280166 . G . PASS END=186280302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:95:37:0,95,1336:0,95,255:40,0 chr1 186280572 . G . PASS END=186280728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:94:33:0,94,1203:0,94,255:40,0 chr1 186281307 . G . PASS END=186281322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 186281323 . G . PASS END=186281326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1125:0,84,255:30,0 chr1 186281327 . A . PASS END=186281327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 186281328 . T . PASS END=186281504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:82:31:0,82,1149:0,82,255:40,0 chr1 186281901 . G . PASS END=186282026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:43:0,111,1665:0,111,255:40,0 chr1 186282813 . A . PASS END=186282910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,119,1703:0,119,255:40,0 chr1 186283103 . T . PASS END=186283158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:80:0,120,1800:0,159,255:40,0 chr1 186283761 . C . PASS END=186283856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:48:0,120,1800:0,138,255:40,0 chr1 186286614 . C . PASS END=186286732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,116,1598:0,116,255:40,0 chr1 186287579 . C . PASS END=186287735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:42:0,81,1665:0,81,255:40,0 chr1 186287865 . C . PASS END=186287960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:40:0,87,1410:0,87,255:40,0 chr1 186289444 . C . PASS END=186289550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:33:0,82,1074:0,82,255:40,0 chr1 186291450 . T . PASS END=186291544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,121,255:40,1 chr1 186291650 . C . PASS END=186291718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:46:0,120,1800:0,136,255:40,0 chr1 186292818 . C . PASS END=186292835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,820:0,61,255:26,0 chr1 186292836 . C . PASS END=186292837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 186292838 . C . PASS END=186292838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:26,0 chr1 186292839 . C . PASS END=186292844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:29,0 chr1 186292845 . T . PASS END=186292846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 186292847 . G . PASS END=186292850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 186292851 . A . PASS END=186292851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:26,0 chr1 186292852 . T . PASS END=186292852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 186292853 . G . PASS END=186292857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:26,0 chr1 186292858 . G . PASS END=186292859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 186292860 . C . PASS END=186292861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 186292862 . G . PASS END=186292991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:35:0,84,1260:0,92,255:40,0 chr1 186292992 . A . PASS END=186293001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,70,255:29,0 chr1 186293002 . C . PASS END=186293002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 186294896 . C . PASS END=186294986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,128,255:40,0 chr1 186295236 . C . PASS END=186295367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:55:0,105,1800:0,105,255:40,2 chr1 186296592 . C . PASS END=186296792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:30:0,84,1260:0,87,255:40,0 chr1 186300630 . T . PASS END=186300713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,156,255:40,0 chr1 186301327 . C . PASS END=186301327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 186301328 . T . PASS END=186301475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:31:0,85,1069:0,85,255:40,0 chr1 186302254 . C . PASS END=186302257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:23,0 chr1 186302258 . G . PASS END=186302258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:25,0 chr1 186302259 . C . PASS END=186302263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 186302264 . T . PASS END=186302264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr1 186302265 . A . PASS END=186302283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1117:0,90,255:37,0 chr1 186302284 . G . PASS END=186302285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:39:0,65,1357:0,65,255:38,0 chr1 186302286 . C . PASS END=186302514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1215:0,82,255:40,0 chr1 186302515 . C . PASS END=186302526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:67:27:0,67,947:0,67,255:26,0 chr1 186303457 . C . PASS END=186303467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:23,0 chr1 186303468 . T . PASS END=186303468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 186303469 . C . PASS END=186303474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:25,0 chr1 186303475 . G . PASS END=186303478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,971:0,84,255:28,0 chr1 186303479 . A . PASS END=186303479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr1 186303480 . G . PASS END=186303481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 186303482 . G . PASS END=186303482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 186303483 . G . PASS END=186303484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 186303485 . C . PASS END=186303485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 186303486 . A . PASS END=186303488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 186303489 . A . PASS END=186303489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 186303490 . C . PASS END=186303493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1305:0,108,255:36,0 chr1 186303494 . A . PASS END=186303494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:34,0 chr1 186303495 . G . PASS END=186303657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:34:0,81,1153:0,81,255:40,0 chr1 186303658 . T . PASS END=186303658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 186303659 . G . PASS END=186303659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 186303660 . C . PASS END=186303665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,90,255:26,0 chr1 186304200 . A . PASS END=186304261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,171,255:40,0 chr1 186304470 . C . PASS END=186304471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 186304472 . T . PASS END=186304472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:26,0 chr1 186304473 . A . PASS END=186304475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 186304476 . A . PASS END=186304476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 186304477 . G . PASS END=186304477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 186304478 . A . PASS END=186304480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 186304481 . G . PASS END=186304497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,89,255:34,0 chr1 186304498 . C . PASS END=186304498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:32,0 chr1 186304499 . T . PASS END=186304675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:35:0,96,1440:0,105,255:40,0 chr1 186305628 . C . PASS END=186305821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:36:0,84,1196:0,84,255:40,0 chr1 186305822 . A . PASS END=186305822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:31,0 chr1 186305823 . A . PASS END=186305826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:33,0 chr1 186306145 . C . PASS END=186306284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1215:0,93,255:40,0 chr1 186306285 . T . PASS END=186306288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:26,0 chr1 186307165 . C . PASS END=186307375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:46:0,105,1574:0,105,255:40,1 chr1 186308774 . C . PASS END=186308904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:50:0,120,1800:0,131,255:40,0 chr1 186310160 . C . PASS END=186310291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,102,1550:0,102,255:40,0 chr1 186310384 . C . PASS END=186310417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:56:0,120,1800:0,154,255:40,0 chr1 186310418 . C . PASS END=186310418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,9:80:54:80:0,54,2169:0,54,255:40,0 chr1 186310419 . T . PASS END=186310521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,107,1800:0,107,255:40,0 chr1 186312458 . C . PASS END=186312464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1195:0,99,255:35,0 chr1 186312465 . T . PASS END=186312465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 186312466 . T . PASS END=186312580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:35:0,83,1173:0,83,255:40,0 chr1 186312581 . A . PASS END=186312581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:34,0 chr1 186312582 . A . PASS END=186312594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1203:0,80,255:34,0 chr1 186312595 . G . PASS END=186312597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:33:0,78,1170:0,89,255:26,0 chr1 186312598 . G . PASS END=186312602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:28,0 chr1 186312603 . A . PASS END=186312603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1135:0,58,255:27,0 chr1 186312604 . A . PASS END=186312605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:28,0 chr1 186313038 . C . PASS END=186313211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:81:35:0,81,1168:0,81,255:40,1 chr1 186313212 . G . PASS END=186313222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,137,255:40,0 chr1 186313507 . C . PASS END=186313681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:37:0,81,1215:0,101,255:40,0 chr1 186313682 . T . PASS END=186313686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,92,255:26,0 chr1 186313687 . C . PASS END=186313690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 186313691 . G . PASS END=186313691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr1 186313692 . C . PASS END=186313695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 186313696 . C . PASS END=186313707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,900:0,61,255:25,0 chr1 186313708 . A . PASS END=186313708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 186313709 . G . PASS END=186313709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 186313710 . C . PASS END=186313710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 186314712 . T . PASS END=186314828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:37:0,95,1327:0,95,255:40,0 chr1 186315267 . C . PASS END=186315277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,105,1575:0,108,255:40,0 chr1 186315278 . T . PASS END=186315419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:43:0,102,1604:0,102,255:40,0 chr1 186316424 . C . PASS END=186316590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:44:0,96,1440:0,97,255:40,0 chr1 186319355 . C . PASS END=186319520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:65:0,120,1800:0,162,255:40,1 chr1 186320462 . A . PASS END=186320602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:87:42:0,87,1305:0,123,255:40,0 chr1 186321108 . C . PASS END=186321242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:38:0,104,1320:0,104,255:40,0 chr1 186322820 . T . PASS END=186322982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:58:0,120,1800:0,150,255:40,0 chr1 186323003 . C . PASS END=186323012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,188,255:40,0 chr1 186324542 . C . PASS END=186324690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,2:97:99:60:0,120,1800:0,153,255:40,0 chr1 186324767 . C . PASS END=186324898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:90:37:0,90,1350:0,107,255:40,0 chr1 186324899 . A . PASS END=186324899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1215:0,72,255:30,0 chr1 186324900 . G . PASS END=186324900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 186325418 . C . PASS END=186325418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 186325419 . A . PASS END=186325581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:92:32:0,92,1288:0,92,255:40,0 chr1 186326529 . T . PASS END=186326755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,116,1493:0,116,255:40,0 chr1 186327675 . C . PASS END=186327782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,116,1480:0,116,255:40,0 chr1 186328931 . C . PASS END=186328933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 186328934 . C . PASS END=186328942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:29,0 chr1 186328943 . T . PASS END=186328943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 186328944 . T . PASS END=186329128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:29:0,87,1101:0,87,255:40,0 chr1 186329405 . C . PASS END=186329496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,107,1800:0,107,255:40,0 chr1 186329897 . C . PASS END=186329906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:72:0,120,1800:0,188,255:40,0 chr1 186329907 . T . PASS END=186330037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:48:0,120,1800:0,139,255:40,0 chr1 186330754 . C . PASS END=186330762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,3:58:99:53:0,120,1800:0,124,255:40,0 chr1 186330763 . C . PASS END=186330763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,8:59:22:59:0,22,1605:0,22,255:40,0 chr1 186330764 . T . PASS END=186330841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,144,255:40,0 chr1 186330921 . C . PASS END=186331001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:59:0,120,1800:0,172,255:40,0 chr1 186331420 . C . PASS END=186331512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,2:110:99:91:0,120,1800:0,246,255:40,0 chr1 186331969 . C . PASS END=186331972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1193:0,89,255:35,0 chr1 186331973 . T . PASS END=186331973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:33,0 chr1 186331974 . C . PASS END=186331978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1252:0,105,255:35,0 chr1 186331979 . T . PASS END=186331979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:33,0 chr1 186331980 . T . PASS END=186331992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1169:0,89,255:36,0 chr1 186331993 . A . PASS END=186331993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:34,0 chr1 186331994 . C . PASS END=186332133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:36:0,90,1216:0,91,255:40,0 chr1 186332474 . C . PASS END=186332577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,181,255:40,0 chr1 186337018 . C . PASS END=186337114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,131,255:40,0 chr1 186340102 . C . PASS END=186340175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:57:0,120,1800:0,123,255:40,0 chr1 186342491 . T . PASS END=186342595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:41:0,96,1504:0,96,255:40,0 chr1 186344010 . C . PASS END=186344019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,881:0,65,255:26,0 chr1 186344020 . C . PASS END=186344022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 186344023 . A . PASS END=186344024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 186344025 . A . PASS END=186344032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,940:0,81,255:29,0 chr1 186344033 . T . PASS END=186344033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 186344034 . G . PASS END=186344035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr1 186344036 . C . PASS END=186344036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 186344037 . G . PASS END=186344050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1041:0,87,255:30,0 chr1 186344051 . T . PASS END=186344051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 186344052 . C . PASS END=186344113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1217:0,89,255:36,0 chr1 186344114 . T . PASS END=186344115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,105,255:25,0 chr1 186344116 . G . PASS END=186344127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1125:0,90,255:30,0 chr1 186344128 . G . PASS END=186344130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr1 186344131 . C . PASS END=186344131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 186344132 . T . PASS END=186344135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 186344136 . G . PASS END=186344136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 186344137 . G . PASS END=186344142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:26,0 chr1 186344143 . C . PASS END=186344159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:28,0 chr1 186344160 . T . PASS END=186344163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 186344164 . G . PASS END=186344167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 186344168 . G . PASS END=186344175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 186344180 . C . PASS END=186344187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,901:0,64,255:22,0 chr1 186344188 . A . PASS END=186344188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:21,0 chr1 186344189 . G . PASS END=186344243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,884:0,66,255:26,0 chr1 186344244 . C . PASS END=186344244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 186344245 . C . PASS END=186344246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 186344247 . G . PASS END=186344248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 186344249 . G . PASS END=186344254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 186344255 . G . PASS END=186344273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:19:0,41,673:0,41,255:19,0 chr1 186344274 . G . PASS END=186344274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:16,0 chr1 186344275 . T . PASS END=186344282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 186344283 . G . PASS END=186344292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 186344293 . C . PASS END=186344316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 186344317 . C . PASS END=186344318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 186344691 . C . PASS END=186344725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 186344726 . T . PASS END=186344726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 186344727 . G . PASS END=186344729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 186344730 . G . PASS END=186344737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:12,0 chr1 186344738 . G . PASS END=186344739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 186344740 . C . PASS END=186344742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 186344743 . T . PASS END=186344757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 186344758 . C . PASS END=186344760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 186348918 . A . PASS END=186349016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:43:0,120,1800:0,129,255:40,0 chr1 186352154 . T . PASS END=186352288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:32:0,84,1260:0,96,255:40,0 chr1 186355120 . G . PASS END=186355215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,148,255:40,0 chr1 186357574 . C . PASS END=186357680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,120,1800:0,132,255:40,0 chr1 186358720 . A . PASS END=186358756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,183,255:40,0 chr1 186359843 . A . PASS END=186359983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,139,255:40,0 chr1 186360828 . A . PASS END=186360923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:68:0,120,1800:0,197,255:40,0 chr1 186363079 . A . PASS END=186363081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,170,255:40,0 chr1 186363082 . A . PASS END=186363118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,160,255:40,0 chr1 186363119 . C G, 50.00 PASS DP=69;MQ=250.00;MQRankSum=7.129;ReadPosRankSum=5.376;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,36,0:0.522,0.000:69:17,22,0:16,14,0:48:85,0,50,1193,1151,2345:255,0,255:32,0:5.0000e+01,6.5751e-05,5.2883e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,20,20,16:15,18,20,16 chr1 186363120 . T . PASS END=186363147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:50:0,114,1710:0,124,255:40,0 chr1 186367431 . A . PASS END=186367565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:93:40:0,93,1373:0,93,255:40,0 chr1 186367566 . C . PASS END=186367566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1324:0,70,255:30,0 chr1 186367567 . T . PASS END=186367570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1260:0,117,255:30,0 chr1 186367571 . C . PASS END=186367573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,101,255:25,0 chr1 186368086 . G . PASS END=186368176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:45:0,120,1800:0,135,255:40,1 chr1 186370178 . A . PASS END=186370312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:71:0,120,1800:0,162,255:40,0 chr1 186375215 . A . PASS END=186375400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:97:37:0,97,1186:0,97,255:40,0 chr1 186380943 . T . PASS END=186380947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,209,255:40,0 chr1 186386676 . C . PASS END=186386786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:82:0,120,1800:0,220,255:40,0 chr1 186388141 . G . PASS END=186388208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,151,255:40,0 chr1 186413111 . T . PASS END=186413638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:92:48:0,92,1522:0,92,255:40,2 chr1 186415558 . C . PASS END=186415709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:37:0,87,1305:0,95,255:40,0 chr1 186418531 . C . PASS END=186418562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,164,255:40,0 chr1 186418563 . T . PASS END=186418591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:68:0,120,1800:0,163,255:40,0 chr1 186643058 . A G, 254.21 PASS DP=69;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,31,0:0,38,0:204:292,207,0,2638,207,2638:255,207,0:0,0:2.5421e+02,2.0421e+02,0.0000e+00,4.5000e+02,2.3898e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,38:0,0,39,30 chr1 186643485 . C . PASS END=186643491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 186643492 . T . PASS END=186643492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 186643493 . C . PASS END=186643493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 186643494 . A . PASS END=186643494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 186643495 . G . PASS END=186643500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:18,0 chr1 186643501 . C . PASS END=186643501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 186643502 . G . PASS END=186643508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:18,0 chr1 186643509 . T . PASS END=186643509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 186643510 . A . PASS END=186643510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:22,0 chr1 186643511 . G . PASS END=186643520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,925:0,75,255:26,0 chr1 186643521 . G . PASS END=186643521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 186643522 . G . PASS END=186643522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 186643523 . G . PASS END=186643532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,964:0,81,255:31,0 chr1 186643533 . A . PASS END=186643533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:33,0 chr1 186643534 . T . PASS END=186643894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:36:0,90,1319:0,90,255:40,0 chr1 186643950 . A . PASS END=186643950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,253,255:40,0 chr1 186644381 . C . PASS END=186644510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:36:0,80,1213:0,80,255:40,0 chr1 186644511 . A . PASS END=186644519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,80,255:26,0 chr1 186644520 . A . PASS END=186644520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:24,0 chr1 186644521 . C . PASS END=186644528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr1 186645030 . C . PASS END=186645294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:31:0,81,1113:0,92,255:40,0 chr1 186645295 . A . PASS END=186645311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr1 186645312 . C . PASS END=186645316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:17,0 chr1 186645599 . C . PASS END=186645604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:25,0 chr1 186645605 . G . PASS END=186645845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:88:34:0,88,1150:0,88,255:40,0 chr1 186645965 . C . PASS END=186646048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,119,1613:0,119,255:40,0 chr1 186646781 . C . PASS END=186646786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:26,0 chr1 186646787 . G . PASS END=186646796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:29,0 chr1 186646797 . T . PASS END=186646797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr1 186646798 . T . PASS END=186646950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1215:0,90,255:40,0 chr1 186646951 . G . PASS END=186646962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 186647393 . C . PASS END=186647394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 186647395 . T . PASS END=186647397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 186647398 . A . PASS END=186647399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 186647400 . A . PASS END=186647400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 186647401 . C . PASS END=186647401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 186647402 . C . PASS END=186647512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1133:0,80,255:40,0 chr1 186647513 . G . PASS END=186647531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,65,255:26,0 chr1 186647532 . T . PASS END=186647536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 186648190 . A . PASS END=186648333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,153,255:40,2 chr1 186648454 . G . PASS END=186648570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,114,1710:0,130,255:40,0 chr1 186649371 . C . PASS END=186649386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 186649387 . C . PASS END=186649387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr1 186649388 . A . PASS END=186649391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr1 186649392 . C . PASS END=186649396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 186649397 . C . PASS END=186649415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 186649416 . C . PASS END=186649422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:21,0 chr1 186650321 . C G, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,8,0:0,17,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,15:0,0,15,10 chr1 186651876 . G . PASS END=186651876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 186823487 . A . PASS END=186823519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,211,255:40,0 chr1 186839567 . G . PASS END=186839571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:31,0 chr1 186839572 . G . PASS END=186839572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 186839573 . C . PASS END=186839574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr1 186839575 . C . PASS END=186839648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:34:0,90,1350:0,99,255:40,0 chr1 186839747 . A . PASS END=186839823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,122,255:40,0 chr1 186839824 . T . PASS END=186839860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,128,255:40,0 chr1 186839861 . G A, 199.11 PASS DP=52;MQ=215.22;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,21,0:0,30,0:149:237,152,0,1874,152,1874:255,156,0:0,0:1.9911e+02,1.4911e+02,0.0000e+00,4.5000e+02,1.8388e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,36:0,0,25,26 chr1 186839862 . C . PASS END=186839876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:44:0,81,1215:0,119,255:40,0 chr1 186849186 . A . PASS END=186849186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 186862143 . T . PASS END=186862291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,104,1665:0,104,255:40,0 chr1 186863230 . A . PASS END=186863339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,195,255:40,0 chr1 186863340 . C . PASS END=186863343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr1 186876097 . G . PASS END=186876134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:77:0,120,1800:0,176,255:40,0 chr1 186880380 . C . PASS END=186880380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 186880381 . T . PASS END=186880381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 186880382 . C . PASS END=186880382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 186880383 . A . PASS END=186880383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 186880384 . T . PASS END=186880510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:35:0,89,1296:0,89,255:40,0 chr1 186880511 . C . PASS END=186880511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:29,0 chr1 186880512 . T . PASS END=186880515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:29,0 chr1 186880516 . C . PASS END=186880519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 186880520 . A . PASS END=186880520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:26,0 chr1 186880521 . T . PASS END=186880521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 186901895 . G . PASS END=186902031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:51:0,120,1800:0,140,255:40,0 chr1 186908140 . G . PASS END=186908334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,119,1546:0,119,255:40,0 chr1 186908335 . G . PASS END=186908362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,131,255:40,0 chr1 186909112 . A . PASS END=186909226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:38:0,111,1665:0,114,255:40,0 chr1 186915769 . A . PASS END=186915906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:59:0,120,1800:0,161,255:40,0 chr1 186916001 . G . PASS END=186916093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,105,1575:0,141,255:40,0 chr1 186919789 . A . PASS END=186919860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:33:0,91,1114:0,91,255:40,0 chr1 186925234 . G . PASS END=186925474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:40:0,102,1480:0,104,255:40,0 chr1 186925475 . A . PASS END=186925475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1333:0,62,255:33,0 chr1 186925476 . G . PASS END=186925476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 186934541 . A . PASS END=186934541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr1 186934542 . T . PASS END=186934547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 186934548 . T . PASS END=186934548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 186934549 . G . PASS END=186934561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:26,0 chr1 186934562 . T . PASS END=186934725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1210:0,87,255:40,0 chr1 186946725 . G . PASS END=186946874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:37:0,88,1374:0,88,255:40,0 chr1 186946875 . C . PASS END=186946911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:48:0,117,1759:0,117,255:40,0 chr1 186946912 . G A, 194.01 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,28,0:0,21,0:144:232,147,0,1847,147,1847:255,147,0:0,0:1.9401e+02,1.4401e+02,0.0000e+00,4.5000e+02,1.7878e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,31:0,0,25,24 chr1 186946913 . G . PASS END=186946920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 186947224 . G C, 181.52 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,26,0:0,19,0:132:219,135,0,1686,135,1686:255,135,0:0,0:1.8152e+02,1.3152e+02,0.0000e+00,4.5000e+02,1.6629e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,20:0,0,18,27 chr1 186948447 . G . PASS END=186948604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:64:0,120,1800:0,171,255:40,0 chr1 186957509 . G . PASS END=186957640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:56:0,120,1800:0,158,255:40,0 chr1 190067148 . T . PASS END=190068144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:34:0,87,1305:0,92,255:40,0 chr1 190068145 . C . PASS END=190068145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:29,0 chr1 190068146 . A . PASS END=190068167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1086:0,86,255:29,0 chr1 190068168 . C . PASS END=190068169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 190068170 . T . PASS END=190068178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 190068179 . G . PASS END=190068179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 190068180 . C . PASS END=190068211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1169:0,80,255:32,0 chr1 190068212 . T . PASS END=190068212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,979:0,76,255:28,0 chr1 190068213 . C . PASS END=190068213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 190068214 . T . PASS END=190068231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,930:0,62,255:26,0 chr1 190068232 . G . PASS END=190068232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 190068233 . A . PASS END=190068233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:21,0 chr1 190068234 . C . PASS END=190068235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 190068236 . G . PASS END=190068236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 190068237 . G . PASS END=190068244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 190068245 . T . PASS END=190068264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,581:0,40,255:19,0 chr1 190073440 . T . PASS END=190073443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr1 190123236 . T . PASS END=190123239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr1 190129798 . C . PASS END=190129801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 190129802 . G . PASS END=190129826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:25,0 chr1 190129827 . T . PASS END=190129827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 190129828 . T . PASS END=190129829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 190129830 . A . PASS END=190129836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 190129837 . C . PASS END=190129879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1109:0,80,255:34,0 chr1 190129880 . T . PASS END=190129880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 190129881 . T . PASS END=190130015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:30:0,86,1172:0,86,255:40,0 chr1 190130016 . T . PASS END=190130016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 190130017 . T . PASS END=190130017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 190130018 . C . PASS END=190130019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 190130020 . T . PASS END=190130020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 190195212 . C . PASS END=190195429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:31:0,81,1164:0,93,255:40,0 chr1 190195430 . G . PASS END=190195432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:25,0 chr1 190195433 . A . PASS END=190195448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:20:0,54,810:0,60,255:19,0 chr1 190203502 . C . PASS END=190203607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:53:0,120,1800:0,131,255:40,0 chr1 190233995 . C . PASS END=190233996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 190233997 . T . PASS END=190234006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:30,0 chr1 190234007 . G . PASS END=190234007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 190234008 . G . PASS END=190234022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1155:0,80,255:37,0 chr1 190234023 . T . PASS END=190234023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr1 190234024 . G . PASS END=190234185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1215:0,100,255:40,0 chr1 190250690 . C . PASS END=190250880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,120,1800:0,143,255:40,0 chr1 190408317 . C . PASS END=190408341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,1:122:99:116:0,120,1800:0,255,255:40,0 chr1 190412720 . C . PASS END=190412721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 190412722 . G . PASS END=190412726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 190412727 . A . PASS END=190412733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:30,0 chr1 190412734 . A . PASS END=190412734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 190412735 . G . PASS END=190412763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1149:0,93,255:38,0 chr1 190412764 . G T, 50.00 PASS DP=42;MQ=249.88;MQRankSum=5.332;ReadPosRankSum=2.713;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,25,0:0.610,0.000:41:8,11,0:8,14,0:46:85,0,46,876,571,1447:255,0,255:15,0:5.0000e+01,1.0096e-04,4.8781e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,10,15:10,6,16,9 chr1 190412765 . A . PASS END=190412801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,103,1373:0,103,255:39,0 chr1 190423785 . C . PASS END=190423997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:29:0,80,1133:0,80,255:40,0 chr1 190423998 . C . PASS END=190424009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr1 190424010 . C . PASS END=190424020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 192127768 . A . PASS END=192127886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:73:0,120,1800:0,149,255:40,0 chr1 192128350 . A . PASS END=192128451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:40:0,90,1350:0,104,255:40,0 chr1 192129508 . A . PASS END=192129569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:70:0,120,1800:0,197,255:40,0 chr1 192130608 . A . PASS END=192130617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,192,255:40,0 chr1 192150422 . A . PASS END=192150588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1440:0,105,255:40,0 chr1 192153427 . G . PASS END=192153678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:35:0,81,1215:0,89,255:40,0 chr1 192153679 . T . PASS END=192153684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,80,255:26,0 chr1 192312167 . A . PASS END=192312177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,211,255:40,0 chr1 192316443 . A . PASS END=192316519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:59:0,120,1800:0,134,255:40,0 chr1 192321177 . C . PASS END=192321343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:63:0,120,1800:0,187,255:40,0 chr1 192335051 . A . PASS END=192335221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:41:0,120,1800:0,123,255:40,0 chr1 192335222 . C . PASS END=192335247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:53:0,81,1215:0,112,255:40,0 chr1 192335248 . T . PASS END=192335249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:75:55:0,75,1125:0,131,255:25,0 chr1 192335250 . T . PASS END=192335254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:45:52:0,45,675:0,140,255:17,0 chr1 192544923 . A . PASS END=192545059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,113,1800:0,113,255:40,0 chr1 192545415 . T . PASS END=192545495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,118,1800:0,118,255:40,0 chr1 192545904 . A . PASS END=192545965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,162,255:40,0 chr1 192547352 . C . PASS END=192547352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1055:0,88,255:33,0 chr1 192547353 . T . PASS END=192547354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:71:35:0,71,985:0,71,255:33,0 chr1 192547355 . G . PASS END=192547356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1199:0,94,255:36,0 chr1 192547357 . C . PASS END=192547357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1061:0,77,255:34,0 chr1 192547358 . A . PASS END=192547361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1312:0,94,255:35,0 chr1 192547362 . T . PASS END=192547362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:8:36:0,8,922:0,8,255:28,0 chr1 192547363 . G . PASS END=192547363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:30:38:0,30,928:0,30,255:30,0 chr1 192547364 . T . PASS END=192547364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 192547365 . C . LowGQ END=192547365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:0:39:0,0,1011:3,0,255:33,0 chr1 192547366 . T . PASS END=192547366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1297:0,78,255:35,0 chr1 192547367 . T . PASS END=192547367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 192547368 . T . PASS END=192547368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:32,0 chr1 192547369 . G . PASS END=192547369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,6:38:14:38:0,14,925:0,14,255:29,0 chr1 192547370 . G . PASS END=192547370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 192547371 . A . PASS END=192547371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1190:0,67,255:31,0 chr1 192547372 . A . PASS END=192547372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 192547373 . G . PASS END=192547373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:20:39:0,20,1094:0,20,255:30,0 chr1 192547374 . T . PASS END=192547376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:39:0,102,1458:0,107,255:36,0 chr1 192547377 . C . PASS END=192547377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:21:42:0,21,1135:0,21,255:35,0 chr1 192547378 . C . PASS END=192547378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1415:0,109,255:37,0 chr1 192547379 . T . PASS END=192547379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1233:0,70,255:38,0 chr1 192547380 . A . PASS END=192547382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1379:0,109,255:40,0 chr1 192547383 . G . PASS END=192547383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1299:0,65,255:40,0 chr1 192547384 . T . PASS END=192547391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,105,1537:0,105,255:40,0 chr1 192547392 . C . PASS END=192547392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:66:48:0,66,1487:0,66,255:40,0 chr1 192547393 . A . PASS END=192547581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:93:48:0,93,1662:0,93,255:40,1 chr1 192548267 . A . PASS END=192548450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:88:38:0,88,1343:0,88,255:40,1 chr1 192548451 . G . PASS END=192548452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr1 192613465 . A . PASS END=192613529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,120,1800:0,123,255:40,0 chr1 192617056 . C . PASS END=192617117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:70:0,120,1800:0,195,255:40,0 chr1 192627331 . A . PASS END=192627333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 192627334 . G . PASS END=192627340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 192627341 . A . PASS END=192627495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:33:0,81,1124:0,83,255:40,0 chr1 192627496 . A . PASS END=192627496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:26,0 chr1 192627497 . G . PASS END=192627497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 192628468 . A . PASS END=192628653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,104,1660:0,104,255:40,0 chr1 192685313 . A . PASS END=192685323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,605:0,41,255:17,0 chr1 192685324 . C . PASS END=192685324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 192685325 . G . PASS END=192685336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:18,0 chr1 192685337 . A . PASS END=192685345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 192685346 . A . PASS END=192685361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:30,0 chr1 192685362 . T . PASS END=192685362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr1 192685363 . T . PASS END=192685364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 192685365 . A . PASS END=192685365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 192685366 . A . PASS END=192685366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 192685367 . C . PASS END=192685368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1123:0,77,255:27,0 chr1 192685369 . C . PASS END=192685380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1189:0,88,255:34,0 chr1 192685381 . A . PASS END=192685381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1199:0,69,255:34,0 chr1 192685382 . G . PASS END=192685407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1274:0,95,255:40,0 chr1 192685408 . T . PASS END=192685408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1377:0,74,255:38,0 chr1 192685409 . A . PASS END=192685627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:41:0,98,1298:0,98,255:40,0 chr1 192685628 . T . PASS END=192685644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1485:0,104,255:40,0 chr1 192685645 . T . PASS END=192685645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1335:0,76,255:35,0 chr1 192685646 . G . PASS END=192685650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1443:0,107,255:40,0 chr1 192685651 . A . PASS END=192685651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1289:0,79,255:37,0 chr1 192685652 . A . PASS END=192685664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:41:0,93,1466:0,93,255:40,0 chr1 192685665 . A G, 46.25 PASS DP=41;MQ=108.54;MQRankSum=-4.132;ReadPosRankSum=3.936;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,28,0:0.683,0.000:41:7,17,0:6,11,0:40:81,0,38,1001,465,1466:255,0,255:9,0:4.6250e+01,4.8720e-04,4.0533e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,12,16:2,11,13,15 chr1 192685666 . T . PASS END=192685699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:33:0,81,1288:0,81,255:35,0 chr1 192685700 . G . PASS END=192685702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:25,0 chr1 192685703 . T . PASS END=192685710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,1078:0,63,255:26,0 chr1 192685711 . A . PASS END=192685711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 192685712 . A . PASS END=192685712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 192685713 . G . PASS END=192685714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 192685715 . C . PASS END=192685734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 192685735 . T . PASS END=192685735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,866:0,59,255:23,0 chr1 192685736 . G . PASS END=192685756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,861:0,69,255:24,0 chr1 192685757 . T . PASS END=192685757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 192685758 . G . PASS END=192685760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 192685761 . T . PASS END=192685761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 192685762 . C . PASS END=192685762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 192685763 . A . PASS END=192685763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 192685764 . A . PASS END=192685764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 192685765 . C . PASS END=192685765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:19,0 chr1 192685766 . A . PASS END=192685768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 192685769 . C . PASS END=192685770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:19,0 chr1 192685771 . A . PASS END=192685771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 192685772 . G . PASS END=192685772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,731:0,30,255:16,0 chr1 192685773 . A . PASS END=192685773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,702:0,19,255:15,0 chr1 192685774 . A . PASS END=192685774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,53,255:15,0 chr1 192685775 . G . PASS END=192685775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,704:0,19,255:14,0 chr1 192685776 . A . PASS END=192685777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:23:0,45,675:0,52,255:15,0 chr1 192685778 . A . PASS END=192685778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:14,0 chr1 192685779 . A . PASS END=192685779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:22:0,42,630:0,50,255:14,0 chr1 192685780 . G . PASS END=192685780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,718:0,33,255:13,0 chr1 192685781 . T . PASS END=192685781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:13,0 chr1 192685782 . A . PASS END=192685783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:30:22:0,30,450:0,49,255:9,0 chr1 192778202 . A . PASS END=192778202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 192778203 . T . PASS END=192778203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 192778204 . G . PASS END=192778204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 192778205 . C . PASS END=192778210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,636:0,65,255:26,0 chr1 192778211 . G . PASS END=192778213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 192778214 . A . PASS END=192778214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 192778215 . T . PASS END=192778311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1039:0,84,255:38,0 chr1 192779296 . T . PASS END=192779397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:37:0,108,1387:0,111,255:40,0 chr1 192779500 . G . PASS END=192779562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,118,1800:0,118,255:40,0 chr1 192780111 . A . PASS END=192780136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,139,255:40,0 chr1 192780137 . T . PASS END=192780273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,99,1665:0,99,255:40,1 chr1 192780274 . A . PASS END=192780274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1552:0,69,255:38,0 chr1 192780275 . G . PASS END=192780277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 192780532 . A . PASS END=192780541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1233:0,86,255:37,0 chr1 192780542 . A . PASS END=192780542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1194:0,61,255:34,0 chr1 192780543 . T . PASS END=192780726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:37:0,98,1380:0,98,255:40,0 chr1 192781172 . C G, 45.94 PASS DP=69;MQ=219.00;MQRankSum=-4.002;ReadPosRankSum=5.723;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,27,0:0.391,0.000:69:21,12,0:21,15,0:45:81,0,50,929,1465,2394:255,0,255:40,0:4.5938e+01,1.3228e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,24,12,15:27,15,19,8 chr1 192985481 . T . PASS END=192985525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:90:0,120,1800:0,246,255:40,0 chr1 192987942 . C . PASS END=192987950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:98:0,120,1800:0,255,255:40,0 chr1 192989473 . T . PASS END=192989511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:63:0,120,1800:0,173,255:40,0 chr1 192989578 . T . PASS END=192989586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,178,255:40,0 chr1 192990227 . C . PASS END=192990325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:64:0,120,1800:0,176,255:40,0 chr1 192992056 . C . PASS END=192992169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:57:0,120,1800:0,164,255:40,0 chr1 192992974 . C . PASS END=192993076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,120,1800:0,174,255:40,0 chr1 192997215 . T . PASS END=192997278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,149,255:40,0 chr1 192998309 . C . PASS END=192998439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:92:36:0,92,1308:0,92,255:40,0 chr1 192998518 . C . PASS END=192998579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,130,255:40,0 chr1 192998662 . A . PASS END=192998786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:80:32:0,80,1155:0,80,255:40,0 chr1 192998787 . C . PASS END=192998787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:28,0 chr1 193013179 . C . PASS END=193013313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:83:43:0,83,1558:0,83,255:40,0 chr1 193018876 . C . PASS END=193018981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,132,255:40,0 chr1 193020884 . T . PASS END=193020947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:68:0,120,1800:0,179,255:40,0 chr1 193028315 . C . PASS END=193028319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 193028320 . C . PASS END=193028361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,772:0,63,255:25,0 chr1 193028362 . A . PASS END=193028362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 193028363 . G . PASS END=193028369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 193028370 . C . PASS END=193028373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 193028374 . C . PASS END=193028374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 193028375 . C . PASS END=193028376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 193028377 . G . PASS END=193028387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,1037:0,60,255:26,0 chr1 193028388 . C . PASS END=193028389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 193028390 . T . PASS END=193028390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 193028391 . G . PASS END=193028395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 193028396 . T . PASS END=193028397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 193028398 . G . PASS END=193028406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:30,0 chr1 193028407 . C . PASS END=193028407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 193028408 . G . PASS END=193028412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 193028413 . G . PASS END=193028413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 193028414 . A . PASS END=193028420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 193028421 . T . PASS END=193028422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,942:0,70,255:27,0 chr1 193028423 . T . PASS END=193028426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 193028427 . T . PASS END=193028429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 193028430 . C . PASS END=193028430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:24,0 chr1 193028431 . A . PASS END=193028437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:25,0 chr1 193028438 . C . PASS END=193028464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 193028465 . A . PASS END=193028465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr1 193028466 . T . PASS END=193028466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 193028467 . C . PASS END=193028471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1111:0,90,255:30,0 chr1 193028472 . C . PASS END=193028472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 193028473 . A . PASS END=193028473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 193028474 . A . PASS END=193028474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 193028475 . A . PASS END=193028478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,983:0,90,255:30,0 chr1 193028479 . G . PASS END=193028479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 193028480 . C . PASS END=193028487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr1 193028488 . C . PASS END=193028488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 193028489 . T . PASS END=193028493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 193028494 . A . PASS END=193028541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr1 193028542 . C . PASS END=193028545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 193028546 . C . PASS END=193028547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 193028548 . G . PASS END=193028556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 193028557 . A . PASS END=193028559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 193028560 . G . PASS END=193028576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,82,255:29,0 chr1 193028577 . C . PASS END=193028592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:25:0,66,990:0,75,255:26,0 chr1 193028593 . G . PASS END=193028593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:23,0 chr1 193028594 . A . PASS END=193028617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,817:0,61,255:25,0 chr1 193028618 . C . PASS END=193028621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 193028622 . T . PASS END=193028622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 193028623 . A . PASS END=193028628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,988:0,84,255:28,0 chr1 193028629 . T . PASS END=193028629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:28,0 chr1 193028630 . T . PASS END=193028638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr1 193028639 . C . PASS END=193028639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 193028640 . T . PASS END=193028640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 193028641 . G . PASS END=193028642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 193028643 . G . PASS END=193028645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 193028763 . C . PASS END=193028836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:18,0 chr1 193028837 . C . PASS END=193028837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 193028838 . G . PASS END=193028856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 193028857 . G . PASS END=193028862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:21,0 chr1 193028863 . T . PASS END=193028863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 193028864 . C . PASS END=193028915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:26,0 chr1 193028916 . T . PASS END=193028916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 193028917 . T . PASS END=193028937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:26,0 chr1 193028938 . C . PASS END=193028945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr1 193028946 . C . PASS END=193028946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 193028947 . G . PASS END=193028948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 193028949 . C . PASS END=193028949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 193028950 . C . PASS END=193028950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 193028951 . C . PASS END=193028951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 193028952 . C . PASS END=193028952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr1 193028953 . A . PASS END=193028953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 193028954 . G . PASS END=193028960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1057:0,87,255:31,0 chr1 193028961 . G . PASS END=193028961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 193028962 . C . PASS END=193028964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1146:0,93,255:31,0 chr1 193028965 . A . PASS END=193028965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,963:0,63,255:30,0 chr1 193028966 . T . PASS END=193029113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:30:0,84,1187:0,89,255:40,0 chr1 193029114 . G . PASS END=193029128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:26,0 chr1 193038185 . A . PASS END=193038193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 193038194 . T . PASS END=193038236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:27:0,81,984:0,81,255:40,0 chr1 193038237 . A . PASS END=193038237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1239:0,78,255:39,0 chr1 193038238 . T . PASS END=193038242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1389:0,96,255:40,0 chr1 193038243 . A . PASS END=193038243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1375:0,74,255:40,0 chr1 193038244 . G . PASS END=193038450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:30:0,81,1048:0,83,255:40,0 chr1 193038451 . A . PASS END=193038471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,892:0,61,255:25,0 chr1 193038472 . T . PASS END=193038519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1056:0,83,255:33,0 chr1 193038520 . T . PASS END=193038520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:30,0 chr1 193038521 . A . PASS END=193038764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:33:0,89,1145:0,89,255:40,0 chr1 193039684 . T . PASS END=193039704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,123,255:40,0 chr1 193039705 . C . PASS END=193039749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,120,1800:0,142,255:40,0 chr1 193044950 . G . PASS END=193045170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:38:0,90,1433:0,90,255:40,1 chr1 193045631 . G . PASS END=193045777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:56:0,120,1800:0,147,255:40,0 chr1 193046043 . G . PASS END=193046180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:83:33:0,83,1156:0,83,255:40,0 chr1 193050494 . A . PASS END=193050606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:37:0,84,1260:0,101,255:40,0 chr1 193050607 . C . PASS END=193050610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,108,255:26,0 chr1 193051316 . G . PASS END=193051419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,84,255:40,0 chr1 193051420 . T . PASS END=193051429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,79,255:27,0 chr1 193051692 . A . PASS END=193051722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:95:36:0,95,1363:0,95,255:40,0 chr1 193051723 . C . PASS END=193051838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,102,1525:0,102,255:40,0 chr1 193053709 . A . PASS END=193053861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:83:43:0,83,1535:0,83,255:40,0 chr1 193054119 . A . PASS END=193054132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:79:0,120,1800:0,204,255:40,0 chr1 193060781 . C . PASS END=193060815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,153,255:40,0 chr1 193065755 . T . PASS END=193065889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,137,255:40,0 chr1 193066714 . A . PASS END=193066880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:30:0,87,1305:0,87,255:40,0 chr1 193066881 . A . PASS END=193066881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 193066882 . A . PASS END=193066885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 193066886 . G . PASS END=193066890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr1 193070271 . T . PASS END=193070334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,111,1665:0,118,255:40,0 chr1 193074394 . C . PASS END=193074397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr1 193074398 . A . PASS END=193074408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 193074409 . G . PASS END=193074416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 193074417 . T . PASS END=193074417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 193074418 . C . PASS END=193074445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr1 193074446 . A . PASS END=193074446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 193074447 . G . PASS END=193074465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 193074466 . C . PASS END=193074466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 193074467 . T . PASS END=193074470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr1 193074471 . A . PASS END=193074495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,607:0,47,255:20,0 chr1 193074496 . G . PASS END=193074496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 193074497 . C . PASS END=193074497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 193074498 . G . PASS END=193074498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 193074499 . C . PASS END=193074499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 193074500 . G . PASS END=193074500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 193074501 . G . PASS END=193074506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 193074507 . A . PASS END=193074507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 193074508 . A . PASS END=193074511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,546:0,51,255:17,0 chr1 193074512 . T . PASS END=193074512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 193074647 . C . PASS END=193074650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 193074651 . T A, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,8,0:0,15,0:66:154,69,0,884,69,884:255,69,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,8:0,0,10,13 chr1 193074652 . C . PASS END=193074655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:25,0 chr1 193074656 . G . PASS END=193074656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 193074657 . C . PASS END=193074657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 193074658 . T . PASS END=193074660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 193074661 . G . PASS END=193074667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 193074668 . C . PASS END=193074686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1172:0,87,255:31,0 chr1 193074687 . G . PASS END=193074687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 193074688 . C . PASS END=193074688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 193074689 . T . PASS END=193074708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr1 193074709 . C . PASS END=193074739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 193074740 . C . PASS END=193074740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 193074741 . G . PASS END=193074742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 193074743 . C . PASS END=193074759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:18,0 chr1 193074760 . A . PASS END=193074768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,35,255:12,0 chr1 193091141 . G . PASS END=193091141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 193091145 . C . PASS END=193091145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 193091164 . A . PASS END=193091164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 193091188 . G . PASS END=193091188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 193091196 . C . PASS END=193091196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 193091210 . G . PASS END=193091210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 193091301 . C . PASS END=193091301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 193091319 . A . PASS END=193091319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr1 193091320 . G . PASS END=193091320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 193091329 . A . PASS END=193091329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1474:0,107,255:38,0 chr1 193091331 . A . PASS END=193091431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,107,1474:0,107,255:40,0 chr1 193091432 . G . PASS END=193091432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:39,0 chr1 193091433 . A . PASS END=193091452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1215:0,101,255:40,0 chr1 193091453 . T . PASS END=193091453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 193091454 . G . PASS END=193091454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 193091455 . T . PASS END=193091462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 193091465 . A . PASS END=193091465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 193094229 . T . PASS END=193094229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 193094240 . A . PASS END=193094240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 193094242 . G . PASS END=193094337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:44:0,120,1800:0,122,255:40,0 chr1 193094338 . A . PASS END=193094348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:57:0,120,1800:0,170,255:40,0 chr1 193094352 . G . PASS END=193094352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 193099302 . A . PASS END=193099373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:65:0,120,1800:0,143,255:40,0 chr1 193104521 . C . PASS END=193104528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1111:0,82,255:34,0 chr1 193104529 . G . PASS END=193104529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1179:0,66,255:33,0 chr1 193104530 . C . PASS END=193104583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:35:0,102,1530:0,105,255:40,0 chr1 193104661 . T . PASS END=193104661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr1 193104667 . T . PASS END=193104720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,137,255:40,0 chr1 193107215 . G . PASS END=193107303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,108,1559:0,113,255:40,0 chr1 193107306 . A . PASS END=193107306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 193107308 . G . PASS END=193107309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,111,1283:0,111,255:37,0 chr1 193110203 . A . PASS END=193110272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:40:0,87,1395:0,87,255:40,0 chr1 193110980 . G . PASS END=193111194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:86:38:0,86,1279:0,86,255:40,0 chr1 193111195 . A . PASS END=193111195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:31,0 chr1 193111196 . G . PASS END=193111197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:30,0 chr1 193116997 . A . PASS END=193117005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:33,0 chr1 193117006 . A . PASS END=193117006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 193117007 . A . PASS END=193117046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1146:0,83,255:36,0 chr1 193117047 . A . PASS END=193117047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr1 193117048 . G . PASS END=193117068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:91:37:0,91,1299:0,91,255:39,0 chr1 193117069 . C . PASS END=193117069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr1 193117070 . G . PASS END=193117090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:34,0 chr1 193117091 . C . PASS END=193117095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr1 193119434 . G . PASS END=193119512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,115,1736:0,115,255:40,0 chr1 193121510 . A . PASS END=193121574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:64:0,120,1800:0,134,255:40,0 chr1 193130253 . G . PASS END=193130324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:78:0,120,1800:0,213,255:40,0 chr1 193149424 . C . PASS END=193149425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 193149426 . A . PASS END=193149436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,685:0,60,255:22,0 chr1 193149437 . C . PASS END=193149437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 193149438 . G . PASS END=193149443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 193149444 . G . PASS END=193149445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,828:0,53,255:23,0 chr1 193149446 . T . PASS END=193149464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,878:0,69,255:26,0 chr1 193149465 . T . PASS END=193149481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,977:0,81,255:31,0 chr1 193149482 . G . PASS END=193149482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 193149483 . C . PASS END=193149489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:31,0 chr1 193149490 . C . PASS END=193149490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 193149491 . T . PASS END=193149494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 193149495 . T . PASS END=193149505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,77,255:26,0 chr1 193149506 . T . PASS END=193149507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 193149508 . G . PASS END=193149520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,853:0,64,255:26,0 chr1 193149521 . A . PASS END=193149523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 193149524 . A . PASS END=193149532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,942:0,70,255:26,0 chr1 193149533 . G . PASS END=193150692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:31:0,81,1205:0,91,255:40,0 chr1 193172919 . T . PASS END=193172919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 193172925 . G . PASS END=193172982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,140,255:40,0 chr1 193181190 . C . PASS END=193181190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,217,255:40,0 chr1 193181192 . C . PASS END=193181192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,238,255:40,0 chr1 193181195 . T . PASS END=193181230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,5:82:99:77:0,120,1800:0,163,255:40,2 chr1 193181235 . G . PASS END=193181236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:80:0,120,1800:0,240,255:40,0 chr1 193181511 . T . PASS END=193181512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,170,255:40,0 chr1 193181517 . T . PASS END=193181517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 193181520 . G . PASS END=193181607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:69:0,120,1800:0,171,255:40,0 chr1 193202120 . A . PASS END=193202120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 193202123 . A . PASS END=193202284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:96:43:0,96,1523:0,96,255:40,0 chr1 193205386 . G . PASS END=193205387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 193205388 . A . PASS END=193205388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:29,0 chr1 193205389 . C . PASS END=193205396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1202:0,96,255:35,0 chr1 193205397 . T . PASS END=193205398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1184:0,72,255:33,0 chr1 193205399 . G . PASS END=193205486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:34:0,91,1227:0,91,255:40,0 chr1 193205495 . C . PASS END=193205495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 193206838 . A . PASS END=193206838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr1 193206839 . T . PASS END=193206846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,923:0,75,255:25,0 chr1 193206847 . T . PASS END=193206869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:30,0 chr1 193218849 . C . PASS END=193218850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1191:0,91,255:34,0 chr1 193218856 . A . PASS END=193218856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 193218860 . T . PASS END=193219001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:47:0,102,1530:0,141,255:40,0 chr1 193219005 . A . PASS END=193219005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,105,1575:0,141,255:35,0 chr1 193219795 . A . PASS END=193219795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 193219806 . G . PASS END=193219842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:66:0,120,1800:0,197,255:40,0 chr1 193219854 . C . PASS END=193219854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 193219936 . A . PASS END=193219936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,211,255:40,0 chr1 193220086 . T . PASS END=193220086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 193220140 . A . PASS END=193220140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 193220295 . A . PASS END=193220295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,206,255:40,0 chr1 193220305 . A . PASS END=193220305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 193220525 . G . PASS END=193220525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 193220779 . G . PASS END=193220779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 193220790 . C . PASS END=193220790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 193220798 . T . PASS END=193220798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 193220814 . A . PASS END=193220814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 193220898 . A . PASS END=193220898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 193220916 . A T, 48.71 PASS DP=76;MQ=248.71;MQRankSum=6.980;ReadPosRankSum=0.210;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,33,0:0.434,0.000:76:21,17,0:22,16,0:47:83,0,50,1103,1385,2487:255,0,255:38,0:4.8713e+01,8.0247e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,20,20,13:31,12,18,15 chr1 193220917 . A . PASS END=193220917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 193220934 . A . PASS END=193220934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,255,255:40,0 chr1 193220974 . G . LowGQ END=193220974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,18:83:0:83:0,0,1722:255,0,255:40,22 chr1 193221093 . A . PASS END=193221093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr1 193221134 . C . PASS END=193221134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 193221138 . C . PASS END=193221138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 193221145 . A . PASS END=193221145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:90:0,120,1800:0,237,255:40,0 chr1 193221207 . T . PASS END=193221207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,203,255:40,0 chr1 193221284 . C . PASS END=193221284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,117,1755:0,128,255:38,0 chr1 193221314 . T . PASS END=193221314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 193221341 . T . PASS END=193221341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 193221377 . A . PASS END=193221377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 193221441 . A . PASS END=193221441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 193221486 . C . PASS END=193221486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 193221502 . A . PASS END=193221502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 193221603 . T . PASS END=193221603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 193221629 . A . PASS END=193221629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 193221631 . G . PASS END=193221631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 193221663 . G . PASS END=193221663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 193221675 . A . PASS END=193221675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr1 193221700 . C . PASS END=193221700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 193221798 . T . PASS END=193221798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,240,255:40,0 chr1 193221827 . T . PASS END=193221827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 193221885 . A . PASS END=193221885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 193221973 . A . PASS END=193221973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr1 193222262 . A . PASS END=193222262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 193222288 . C . PASS END=193222288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 193222297 . C . PASS END=193222297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr1 193222467 . A . PASS END=193222467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr1 193222481 . C . PASS END=193222481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:97:0,120,1800:0,255,255:40,0 chr1 193222493 . T . PASS END=193222493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 193222643 . A . PASS END=193222643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 193222804 . T . PASS END=193222805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 193222824 . T . PASS END=193222824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 193222928 . C . PASS END=193222928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 193223099 . A . PASS END=193223099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1391:0,120,255:40,0 chr1 193223108 . A . PASS END=193223108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 193223184 . G . PASS END=193223184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 193223247 . C . PASS END=193223247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 193223261 . T . PASS END=193223261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 193223384 . A . PASS END=193223384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 193223537 . C . PASS END=193223537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 193223556 . T . PASS END=193223556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 193223625 . C . PASS END=193223625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 193223627 . A . PASS END=193223627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr1 193223633 . T . PASS END=193223633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1710:0,144,255:38,0 chr1 193223717 . A . PASS END=193223717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 193223729 . G . PASS END=193223729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 196154898 . C . PASS END=196154898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr1 196197354 . T . PASS END=196197465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:35:0,96,1351:0,97,255:40,0 chr1 196205116 . A . PASS END=196205200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:68:0,120,1800:0,201,255:40,0 chr1 196227271 . C . PASS END=196227488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:56:0,118,1800:0,118,255:40,0 chr1 196227489 . G . PASS END=196227525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,160,255:40,0 chr1 196227526 . A G, 244.72 PASS DP=66;MQ=247.62;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,32,0:0,34,0:195:282,198,0,2495,198,2495:255,198,0:0,0:2.4472e+02,1.9472e+02,0.0000e+00,4.5000e+02,2.2949e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,34:0,0,36,30 chr1 196227527 . T . PASS END=196227563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,149,255:40,0 chr1 196227564 . G . PASS END=196227615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:33:0,81,1215:0,89,255:40,0 chr1 196227616 . T . PASS END=196227616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:27,0 chr1 196227617 . A . PASS END=196227621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 196227622 . A . PASS END=196227624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,987:0,73,255:26,0 chr1 196242598 . T . PASS END=196242618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:140,1:141:99:140:0,120,1800:0,255,255:40,0 chr1 196249978 . T . PASS END=196250118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:37:0,93,1395:0,111,255:40,0 chr1 196251403 . A . PASS END=196251484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:62:0,120,1800:0,185,255:40,0 chr1 196251485 . G . PASS END=196251486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:80:0,120,1800:0,193,255:40,0 chr1 196254787 . C . PASS END=196254888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:52:0,120,1800:0,121,255:40,0 chr1 196258974 . C . PASS END=196259150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:36:0,102,1530:0,108,255:40,0 chr1 196274364 . C . PASS END=196274475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:55:0,120,1800:0,127,255:40,0 chr1 196285022 . C . PASS END=196285027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1241:0,86,255:34,0 chr1 196285028 . A . PASS END=196285028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1209:0,66,255:34,0 chr1 196285029 . G . PASS END=196285144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1216:0,95,255:40,0 chr1 196285145 . A . PASS END=196285145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:25,0 chr1 196285146 . A . PASS END=196285146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 196285147 . G . PASS END=196285156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,74,255:25,0 chr1 196286360 . T . PASS END=196286399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:113:0,120,1800:0,255,255:40,0 chr1 196288614 . T . PASS END=196288685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:79:0,120,1800:0,196,255:40,0 chr1 196295847 . G . PASS END=196296019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:35:0,84,1260:0,88,255:40,0 chr1 196300286 . C . PASS END=196300391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:55:0,120,1800:0,149,255:40,0 chr1 196302977 . T . PASS END=196303190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:42:0,110,1512:0,110,255:40,0 chr1 196309471 . C . PASS END=196309486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:37,0 chr1 196309487 . G . PASS END=196309487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 196309488 . C . PASS END=196309681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:38:0,105,1575:0,114,255:40,0 chr1 196309682 . A . PASS END=196309682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:34,0 chr1 196309683 . A . PASS END=196309700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:36:0,82,1355:0,82,255:36,0 chr1 196311209 . T . PASS END=196311358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:83:41:0,83,1565:0,83,255:40,0 chr1 196312186 . C . PASS END=196312187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 196312188 . G . PASS END=196312192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 196312193 . G . PASS END=196312193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 196312194 . G . PASS END=196312194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 196312195 . A . PASS END=196312196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 196312197 . C . PASS END=196312206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,936:0,87,255:29,0 chr1 196312207 . C . PASS END=196312207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 196312208 . C . PASS END=196312208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 196312209 . T . PASS END=196312209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 196312210 . A . PASS END=196312211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 196312212 . A . PASS END=196312212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,960:0,70,255:27,0 chr1 196312213 . T . PASS END=196312217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 196312218 . G . PASS END=196312218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 196312219 . A . PASS END=196312221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 196312222 . T . PASS END=196312235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,71,255:26,0 chr1 196342270 . T . PASS END=196342378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:38:0,100,1454:0,100,255:40,0 chr1 196367693 . C . PASS END=196367801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,164,255:40,0 chr1 196375089 . C . PASS END=196375103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:96:0,120,1800:0,255,255:40,0 chr1 196392180 . A . PASS END=196392243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:36:0,105,1575:0,108,255:40,0 chr1 196394982 . T . PASS END=196395118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:93:42:0,93,1332:0,103,255:40,0 chr1 196397235 . C . PASS END=196397399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:40:0,99,1485:0,103,255:40,0 chr1 196398707 . C . PASS END=196398866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:32:0,83,1166:0,83,255:40,1 chr1 196398867 . A . PASS END=196398887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:25,0 chr1 196434423 . C . PASS END=196434517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:42:0,120,1800:0,126,255:40,0 chr1 196436833 . A . PASS END=196436916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,162,255:40,0 chr1 196438124 . T . PASS END=196438198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:75:0,120,1800:0,218,255:40,0 chr1 196448309 . C . PASS END=196448368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:82:0,120,1800:0,222,255:40,0 chr1 196451461 . C . PASS END=196451509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:75:0,120,1800:0,209,255:40,0 chr1 196458968 . C . PASS END=196459067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:77:0,120,1800:0,207,255:40,2 chr1 196461392 . T . PASS END=196461471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:92:0,120,1800:0,255,255:40,0 chr1 196498525 . C . PASS END=196498603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:32:0,84,1260:0,96,255:40,0 chr1 196498604 . A . PASS END=196498604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1034:0,65,255:26,0 chr1 196498605 . C . PASS END=196498606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 196498607 . T . PASS END=196498607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 196577345 . C . PASS END=196577439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,112,1800:0,112,255:40,0 chr1 196621073 . T . PASS END=196621073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 196621248 . A . PASS END=196621305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:61:0,120,1800:0,183,255:40,0 chr1 196642098 . T . PASS END=196642098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1341:0,105,255:35,0 chr1 196642108 . A . PASS END=196642258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1251:0,89,255:40,0 chr1 196642259 . A . PASS END=196642271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:25,0 chr1 196642272 . A . PASS END=196642272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 196642273 . A . PASS END=196642273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 196642274 . T . PASS END=196642290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,706:0,44,255:19,0 chr1 196642291 . A . PASS END=196642291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 196642292 . G . PASS END=196642293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 196642972 . T . PASS END=196642972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 196642987 . A . PASS END=196643092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:64:0,120,1800:0,180,255:40,0 chr1 196643098 . T . PASS END=196643098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,102,1530:0,173,255:33,0 chr1 196645119 . G . PASS END=196645195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:53:0,120,1800:0,146,255:40,0 chr1 196646603 . C . PASS END=196646603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 196646606 . T . PASS END=196646607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 196646608 . G . PASS END=196646608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 196646609 . T . PASS END=196646610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 196646611 . A . PASS END=196646614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 196646615 . G . PASS END=196646797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:84:29:0,84,1135:0,87,255:40,0 chr1 196648753 . A . PASS END=196648923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:47:0,120,1800:0,132,255:40,0 chr1 196654194 . A . PASS END=196654286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1302:0,92,255:40,0 chr1 196654287 . G . PASS END=196654323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,133,255:40,0 chr1 196654324 . A C, 220.64 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,27,0:0,31,0:171:258,174,0,2179,174,2179:255,174,0:0,0:2.2064e+02,1.7064e+02,0.0000e+00,4.5000e+02,2.0541e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,35:0,0,34,24 chr1 196654325 . A . PASS END=196654361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,95,255:40,0 chr1 196654362 . G . PASS END=196654367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:29,0 chr1 196658550 . T . PASS END=196658744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:84:28:0,84,1033:0,84,255:40,0 chr1 196659193 . G . PASS END=196659199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1227:0,99,255:33,0 chr1 196659200 . T . PASS END=196659214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1140:0,85,255:33,0 chr1 196659215 . G . PASS END=196659215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr1 196659216 . G . PASS END=196659236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1200:0,83,255:35,0 chr1 196659237 . C T, 150.87 PASS DP=35;MQ=147.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,20,0:0,15,0:102:189,105,0,1312,105,1312:255,105,0:0,0:1.5087e+02,1.0187e+02,0.0000e+00,4.5000e+02,1.3664e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,18:0,0,20,15 chr1 196659238 . A . PASS END=196659238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1141:0,58,255:31,0 chr1 196659239 . T . PASS END=196659274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:35:0,91,1227:0,91,255:40,0 chr1 196659275 . T . PASS END=196659350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:34:0,84,1260:0,100,255:40,0 chr1 196659351 . C . PASS END=196659369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,959:0,65,255:26,0 chr1 196659373 . A . PASS END=196659373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 196661506 . A . PASS END=196661510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,143,255:40,0 chr1 196670448 . G . PASS END=196670461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,110,1470:0,110,255:40,0 chr1 196682865 . A . PASS END=196682909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,120,1800:0,137,255:40,0 chr1 196682910 . C . PASS END=196682946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:74:0,120,1800:0,206,255:40,0 chr1 196682947 . G A, 319.95 PASS DP=91;MQ=208.45;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,91,0:1.000,0.000:91:0,36,0:0,55,0:270:358,273,0,3422,273,3422:255,255,0:0,0:3.1995e+02,2.6995e+02,0.0000e+00,4.4853e+02,3.0472e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,51:0,0,49,42 chr1 196682948 . A . PASS END=196682984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:89:0,120,1800:0,206,255:40,0 chr1 196682985 . G . PASS END=196683047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:42:0,114,1710:0,126,255:40,0 chr1 196684723 . A . PASS END=196684899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:84:40:0,84,1260:0,120,255:40,0 chr1 196694251 . A . PASS END=196694417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:84:41:0,84,1261:0,84,255:40,0 chr1 196694418 . A . PASS END=196694419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:75:43:0,75,1125:0,129,255:25,0 chr1 196694420 . A . PASS END=196694424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:43:0,81,1215:0,113,255:29,0 chr1 196694425 . A . PASS END=196694427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:63:44:0,63,945:0,131,255:22,0 chr1 196695600 . A . PASS END=196695782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:50:0,111,1665:0,129,255:40,0 chr1 196695891 . T . PASS END=196696070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:45:0,93,1395:0,104,255:40,0 chr1 196696933 . G A, 100.72 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,11,0:0,7,0:51:138,54,0,669,54,669:255,54,0:0,0:1.0072e+02,5.0716e+01,3.6758e-05,4.5000e+02,8.5486e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,14:0,0,5,13 chr1 196697476 . C . PASS END=196697652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:44:0,114,1710:0,117,255:40,0 chr1 196705954 . T . PASS END=196705954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 196705955 . G . PASS END=196705961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,721:0,60,255:24,0 chr1 196705962 . A . PASS END=196705963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 196705964 . A . PASS END=196705964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 196705965 . C . PASS END=196706136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:96:34:0,96,1440:0,102,255:40,0 chr1 196706144 . G . PASS END=196706144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:72:44:0,72,1080:0,132,255:24,0 chr1 196706605 . A . PASS END=196706612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1012:0,90,255:30,0 chr1 196706613 . C . PASS END=196706613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 196706614 . C . PASS END=196706790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:80:31:0,80,1097:0,80,255:40,0 chr1 196709749 . G . PASS END=196709755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,825:0,72,255:24,0 chr1 196709756 . T . PASS END=196709756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 196709757 . T . PASS END=196709757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 196709758 . G . PASS END=196709762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 196709763 . T . PASS END=196709777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,842:0,67,255:26,0 chr1 196709778 . T . PASS END=196709920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:32:0,87,1305:0,96,255:40,0 chr1 196709921 . A . PASS END=196709922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 196709935 . G . PASS END=196709935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:24,0 chr1 196710998 . A . PASS END=196710998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1225:0,99,255:33,0 chr1 196711005 . A . PASS END=196711013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:94:34:0,94,1226:0,94,255:38,0 chr1 196711014 . G . PASS END=196711014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:36,0 chr1 196711015 . T . PASS END=196711015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1239:0,64,255:35,0 chr1 196711016 . C . PASS END=196711181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:34:0,81,1215:0,82,255:40,0 chr1 196711185 . C . PASS END=196711185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 196712575 . T . PASS END=196712575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 196712577 . T . PASS END=196712577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 196712580 . A . PASS END=196712580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 196712582 . A . PASS END=196712595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:29:0,84,1260:0,87,255:40,0 chr1 196712596 . A T, 47.65 PASS DP=49;MQ=112.00;MQRankSum=-1.929;ReadPosRankSum=0.717;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,28,0:0.571,0.000:49:9,14,0:12,14,0:46:82,0,48,972,670,1643:255,0,255:21,0:4.7650e+01,1.0846e-04,5.1066e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,4,23,5:11,10,15,13 chr1 196712597 . A . PASS END=196712633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:82:51:0,82,1432:0,82,255:40,0 chr1 196712634 . A . PASS END=196712758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:69:0,120,1800:0,128,255:40,0 chr1 196712770 . T . PASS END=196712770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:99:61:0,120,1800:0,133,255:40,0 chr1 196714947 . A . PASS END=196714956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,100,1488:0,100,255:40,2 chr1 196714957 . A . PASS END=196714957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1607:0,72,255:40,2 chr1 196714958 . A . PASS END=196715129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:35:0,90,1336:0,95,255:40,0 chr1 196716241 . A . PASS END=196716443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:47:0,120,1800:0,124,255:40,0 chr1 196716457 . G . PASS END=196716457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 196716570 . G . PASS END=196716570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 196744017 . A . LowDepth;LowGQ END=196744074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196748292 . T . LowDepth;LowGQ END=196748486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196748927 . G . LowDepth;LowGQ END=196749103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196757346 . G . LowDepth;LowGQ END=196757528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196757875 . C . LowDepth;LowGQ END=196757960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196759175 . A . LowDepth;LowGQ END=196759357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196762447 . A . LowDepth;LowGQ END=196762643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196763708 . A . LowDepth;LowGQ END=196763733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196788975 . A . PASS END=196788989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 196788990 . A . PASS END=196788991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 196788992 . T . PASS END=196788995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 196788996 . A . PASS END=196788996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 196788997 . T . PASS END=196789002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 196789003 . T . PASS END=196789014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 196789015 . C . PASS END=196789015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 196789016 . C . PASS END=196789032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr1 196794607 . C . LowDepth;LowGQ END=196794801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196795959 . G . LowDepth;LowGQ END=196796135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196797200 . A . LowDepth;LowGQ END=196797376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196799630 . A . LowDepth;LowGQ END=196799813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196800927 . A . LowDepth;LowGQ END=196801129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 196827496 . A . PASS END=196827538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,111,1717:0,111,255:40,0 chr1 196857281 . A . PASS END=196857338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:88:0,120,1800:0,240,255:40,0 chr1 196869100 . T G, 48.69 PASS DP=55;MQ=250.00;MQRankSum=6.305;ReadPosRankSum=2.554;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,24,0:0.436,0.000:55:17,11,0:14,13,0:47:83,0,50,858,1072,1930:255,0,255:31,0:4.8691e+01,8.0506e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,13,12,12:10,21,11,13 chr1 196871548 . A . PASS END=196871563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1303:0,84,255:39,0 chr1 196871564 . T . PASS END=196871564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr1 196871565 . T . PASS END=196871566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 196871567 . T . PASS END=196871567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:37,0 chr1 196871568 . C . PASS END=196871679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,107,1474:0,107,255:40,0 chr1 196871680 . C . PASS END=196871712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:39:0,84,1260:0,117,255:40,0 chr1 196871713 . A . PASS END=196871716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:37:0,78,1170:0,111,255:26,0 chr1 196871717 . T C, 46.90 PASS DP=37;MQ=235.48;MQRankSum=1.222;ReadPosRankSum=0.696;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,15,0:0.405,0.000:37:12,6,0:10,9,0:46:82,0,50,497,787,1284:255,0,255:15,0:4.6904e+01,1.1028e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,15,4,11:13,9,9,6 chr1 196871718 . G . PASS END=196871724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:25,0 chr1 196871725 . C . PASS END=196871726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,855:0,42,255:21,0 chr1 196871727 . C . PASS END=196871731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:20,0 chr1 196871732 . G . PASS END=196871745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,54,255:18,0 chr1 196874238 . G . PASS END=196874318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:86:44:0,86,1582:0,86,255:40,0 chr1 196874319 . C . PASS END=196874355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,2:91:99:74:0,120,1800:0,212,255:40,0 chr1 196874356 . G T, 322.99 PASS DP=92;MQ=119.45;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,92,0:1.000,0.000:92:0,43,0:0,49,0:274:361,277,0,3549,277,3549:255,255,0:0,0:3.2299e+02,2.7389e+02,0.0000e+00,4.4853e+02,3.0866e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,44,48:0,0,47,45 chr1 196874357 . G . PASS END=196874393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:89:0,120,1800:0,226,255:40,0 chr1 196874394 . G . PASS END=196874420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,192,255:40,0 chr1 196875991 . A . PASS END=196876167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,117,1693:0,117,255:40,0 chr1 196876433 . T . PASS END=196876457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,110,1496:0,110,255:40,0 chr1 196876458 . A G,T, 47.37 PASS DP=47;MQ=234.48;MQRankSum=1.689;ReadPosRankSum=2.872;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,19,1,0:0.404,0.021,0.000:47:16,11,0,0:11,8,1,0:46:82,0,50,635,921,685,642,935,1563,1577:255,0,255:26,0:4.7373e+01,1.0122e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:11,16,6,14:12,15,11,9 chr1 196876459 . C . PASS END=196876495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:47:0,111,1668:0,111,255:40,0 chr1 196876496 . A . PASS END=196876624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,94,255:40,0 chr1 196876625 . A . PASS END=196876628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,82,255:26,0 chr1 196879411 . C . PASS END=196879608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:44:0,120,1800:0,132,255:40,0 chr1 196881870 . G . PASS END=196882052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:52:0,120,1800:0,139,255:40,0 chr1 196883625 . A . PASS END=196883792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:84:37:0,84,1299:0,84,255:40,0 chr1 196883793 . C . PASS END=196883801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:26,0 chr1 196884073 . T . PASS END=196884073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:23,0 chr1 196884074 . A . PASS END=196884075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,880:0,42,255:25,1 chr1 196884076 . T . PASS END=196884076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,840:0,39,255:26,0 chr1 196884077 . T . PASS END=196884079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 196884080 . T . PASS END=196884082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 196884083 . C . PASS END=196884083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 196884084 . A . PASS END=196884085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 196884086 . A . PASS END=196884086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 196884087 . T . PASS END=196884252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,1016:0,81,255:40,0 chr1 196884253 . C . PASS END=196884261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,73,255:25,0 chr1 196884262 . T . PASS END=196884268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:27:0,51,765:0,65,255:18,0 chr1 196885672 . G . PASS END=196885684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:74:0,120,1800:0,212,255:40,0 chr1 196885685 . T C, 45.05 PASS DP=78;MQ=63.31;MQRankSum=1.246;ReadPosRankSum=4.973;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,47,0:0.603,0.000:78:10,19,0:21,28,0:42:80,0,42,1665,1100,2765:255,0,255:30,0:4.5050e+01,2.8916e-04,4.4517e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,29,18:16,15,23,24 chr1 196885686 . A . PASS END=196885691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:77:0,120,1800:0,214,255:40,0 chr1 196887340 . A . PASS END=196887536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:46:0,120,1800:0,131,255:40,0 chr1 196913011 . A . PASS END=196913016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,127:4,0 chr1 196913017 . C . LowGQ END=196913017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 196913018 . T . PASS END=196913063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 196913064 . A . LowGQ END=196913064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr1 196913065 . G . PASS END=196913068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 196918585 . C . PASS END=196918779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:48:0,102,1800:0,102,255:40,0 chr1 196919982 . G . PASS END=196920110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,120,1800:0,147,255:40,0 chr1 196920111 . C . PASS END=196920147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,115,1537:0,115,255:40,0 chr1 196920148 . C T, 45.02 PASS DP=42;MQ=164.14;MQRankSum=-1.437;ReadPosRankSum=-0.142;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,16,0:0.381,0.000:42:12,7,0:14,9,0:44:80,0,50,544,930,1473:255,0,255:24,0:4.5020e+01,1.5843e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,19,5,11:15,11,10,6 chr1 196920149 . A . PASS END=196920159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,99,1485:0,110,255:40,0 chr1 196927021 . T . PASS END=196927033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,651:0,41,255:19,0 chr1 196927034 . A . PASS END=196927044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:23,0 chr1 196927045 . C . PASS END=196927045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 196927046 . T . PASS END=196927049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 196927050 . C . PASS END=196927054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:31,0 chr1 196927055 . T . PASS END=196927055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:31,0 chr1 196927056 . G . PASS END=196927066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1166:0,85,255:35,0 chr1 196927067 . C . PASS END=196927067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 196927068 . A . PASS END=196927203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:37:0,80,1252:0,80,255:40,0 chr1 196928011 . A . PASS END=196928210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:83:36:0,83,1335:0,83,255:40,0 chr1 196944178 . A . PASS END=196944244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,119,1657:0,119,255:40,0 chr1 196946717 . C . PASS END=196946717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr1 196946795 . A . PASS END=196946831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:96:0,120,1800:0,255,255:40,0 chr1 196946832 . T . PASS END=196946852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:76:0,120,1800:0,171,255:40,0 chr1 196952015 . G . PASS END=196952209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,114,1710:0,137,255:40,0 chr1 196953091 . G . PASS END=196953100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:25,0 chr1 196953101 . C . PASS END=196953102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 196953103 . T . PASS END=196953104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1013:0,71,255:26,0 chr1 196953105 . C . PASS END=196953261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:29:0,80,1139:0,80,255:40,0 chr1 196953262 . T . PASS END=196953267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:25,0 chr1 196953277 . A . PASS END=196953277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr1 196963210 . A . PASS END=196963376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:81:29:0,81,1057:0,86,255:40,0 chr1 196963377 . A . PASS END=196963386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:25,0 chr1 196964841 . T . PASS END=196964841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 196964844 . T . PASS END=196964844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:30,0 chr1 196964847 . G . PASS END=196965024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:95:35:0,95,1311:0,95,255:40,0 chr1 196965025 . T . PASS END=196965029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,176,255:40,0 chr1 196965152 . A . PASS END=196965331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:84:37:0,84,1260:0,97,255:40,0 chr1 196967258 . C . PASS END=196967420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:39:0,101,1434:0,101,255:40,0 chr1 196967421 . A . PASS END=196967434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:37:0,81,1215:0,95,255:40,0 chr1 196971612 . A . PASS END=196971613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr1 196971614 . A . PASS END=196971614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 196971615 . A . PASS END=196971619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:27,0 chr1 196971620 . G . PASS END=196971621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 196971622 . A . PASS END=196971622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:28,0 chr1 196971623 . C . PASS END=196971623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:32,0 chr1 196971624 . A . PASS END=196971624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 196971625 . A . PASS END=196971625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 196971626 . T . PASS END=196971627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:32,0 chr1 196971628 . C . PASS END=196971629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1121:0,64,255:32,0 chr1 196971630 . G . PASS END=196971630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:35,0 chr1 196971631 . C . PASS END=196971631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:34,0 chr1 196971632 . C . PASS END=196971636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1286:0,92,255:38,0 chr1 196971637 . G . PASS END=196971637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:36,0 chr1 196971638 . C . PASS END=196971794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:38:0,105,1504:0,105,255:40,0 chr1 196973789 . A . PASS END=196973789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr1 196973791 . A . PASS END=196973791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 196973792 . G . PASS END=196973793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 196973794 . C . PASS END=196973794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 196973795 . T . PASS END=196973802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1111:0,80,255:36,0 chr1 196973803 . A . PASS END=196973803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:34,0 chr1 196973804 . T . PASS END=196973942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:39:0,93,1395:0,105,255:40,0 chr1 196973943 . A . PASS END=196973944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 196973945 . A . PASS END=196973947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:35:0,81,1215:0,100,255:28,0 chr1 196973948 . G . PASS END=196973952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,89,255:22,0 chr1 196973953 . C . PASS END=196973954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:57:32:0,57,855:0,96,255:19,0 chr1 196973955 . G . PASS END=196973963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 196973964 . A . PASS END=196973966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 196973967 . T . PASS END=196973967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:16,0 chr1 196973968 . G . PASS END=196973973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:18,0 chr1 196977617 . A . PASS END=196977813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:35:0,105,1319:0,105,255:40,0 chr1 196978050 . T . PASS END=196978050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 196978137 . T . PASS END=196978137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 196978175 . A . PASS END=196978175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr1 196978227 . A . PASS END=196978227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 196978315 . C . PASS END=196978315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 196978331 . A . PASS END=196978331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 196978432 . G . PASS END=196978432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1466:0,117,255:39,0 chr1 196978467 . G . PASS END=196978467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 196978558 . C . PASS END=196978558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1336:0,90,255:34,0 chr1 196978673 . A . PASS END=196978673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 196978679 . G . PASS END=196978679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 196978743 . G . PASS END=196978743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 196978779 . G . PASS END=196978779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1336:0,57,255:35,0 chr1 196978787 . T . PASS END=196978787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1288:0,73,255:27,0 chr1 197008346 . G . PASS END=197008346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:65:0,120,1800:0,162,255:40,0 chr1 197008508 . C . PASS END=197008541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,172,255:40,0 chr1 197009429 . T . PASS END=197009507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,121,255:40,0 chr1 197009652 . C . PASS END=197009674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,154,255:40,0 chr1 197009675 . A . PASS END=197009760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:68:0,120,1800:0,154,255:40,0 chr1 197009761 . T . PASS END=197009797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:77:0,120,1800:0,220,255:40,0 chr1 197009798 . A G, 47.33 PASS DP=90;MQ=250.00;MQRankSum=8.036;ReadPosRankSum=6.970;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,37,0:0.411,0.000:90:27,15,0:26,22,0:46:82,0,50,1299,1859,3158:255,0,255:40,0:4.7331e+01,1.0199e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,20,18,19:29,24,24,13 chr1 197009799 . T . PASS END=197009835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:89:0,120,1800:0,240,255:40,0 chr1 197009836 . C . PASS END=197009865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:68:0,120,1800:0,184,255:40,0 chr1 197009870 . G . PASS END=197009870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 197019827 . C . PASS END=197020009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:55:0,120,1800:0,149,255:40,0 chr1 197020022 . G . PASS END=197020022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 197021764 . C . PASS END=197021964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:45:0,105,1575:0,114,255:40,0 chr1 197024845 . C . PASS END=197025027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:92:36:0,92,1318:0,92,255:40,0 chr1 197026143 . C . PASS END=197026328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:41:0,120,1800:0,122,255:40,0 chr1 197026332 . A . PASS END=197026332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 197026416 . C . PASS END=197026595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:59:0,120,1800:0,161,255:40,0 chr1 197029496 . C . PASS END=197029672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:43:0,105,1499:0,112,255:40,0 chr1 197030029 . T . PASS END=197030163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:55:0,120,1800:0,149,255:40,0 chr1 197030164 . T . PASS END=197030192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:45:0,81,1215:0,135,255:40,0 chr1 197030193 . G . PASS END=197030200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:42:0,69,1035:0,109,255:25,0 chr1 197030201 . T C, 170.39 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,23,0:0,18,0:120:208,123,0,1560,123,1560:255,123,0:0,0:1.7039e+02,1.2039e+02,0.0000e+00,4.5000e+02,1.5516e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,25:0,0,18,23 chr1 197030202 . G . PASS END=197030205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,99,255:25,0 chr1 197030914 . C . PASS END=197030983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,110,1513:0,110,255:40,0 chr1 197030984 . C . PASS END=197031020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,171,255:40,0 chr1 197031021 . C T, 253.27 PASS DP=69;MQ=249.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,33,0:0,36,0:203:291,206,0,391,391,391:255,207,0:0,0:2.5327e+02,2.0327e+02,0.0000e+00,3.8804e+02,4.2281e+02,3.9105e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,31,38:0,0,41,28 chr1 197031022 . G . PASS END=197031058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,132,255:40,0 chr1 197031059 . A . PASS END=197031077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:46:0,81,1215:0,114,255:40,0 chr1 197031078 . A . PASS END=197031081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:38:0,72,1080:0,114,255:25,0 chr1 197031082 . C . PASS END=197031099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:20:0,42,621:0,42,255:19,0 chr1 197031987 . T . PASS END=197031998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr1 197031999 . G . PASS END=197032018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr1 197032019 . G . PASS END=197032031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:32:0,83,1216:0,83,255:35,0 chr1 197032032 . T . PASS END=197032032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:32,0 chr1 197032033 . T . PASS END=197032172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:36:0,87,1297:0,95,255:40,0 chr1 197032173 . A . PASS END=197032174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 197032175 . C . PASS END=197032176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:27,0 chr1 197032177 . A . PASS END=197032187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,80,255:25,0 chr1 197036290 . C . PASS END=197036353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:67:0,120,1800:0,174,255:40,0 chr1 197036376 . G . PASS END=197036376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr1 197036383 . A . PASS END=197036383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,240,255:40,0 chr1 197053296 . A . PASS END=197053296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr1 197053309 . A . PASS END=197053309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,211,255:40,0 chr1 197053372 . C . PASS END=197053372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:86:0,120,1800:0,220,255:40,0 chr1 197053376 . G . PASS END=197053376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr1 197053393 . C . PASS END=197053393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,191,255:40,0 chr1 197053454 . C . PASS END=197053511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:87:0,120,1800:0,245,255:40,0 chr1 197053512 . A . PASS END=197053556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:78:0,108,1620:0,186,255:40,0 chr1 197055928 . C . PASS END=197055928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 197055933 . C . PASS END=197055962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:69:0,120,1800:0,157,255:40,0 chr1 197055963 . T . PASS END=197056102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:93:43:0,93,1395:0,122,255:40,0 chr1 197057386 . A . PASS END=197057562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:63:0,120,1800:0,178,255:40,0 chr1 197057634 . C . PASS END=197057634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:96:0,120,1800:0,255,255:40,0 chr1 197059059 . C . PASS END=197059214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:36:0,108,1299:0,108,255:40,0 chr1 197059221 . G . PASS END=197059221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:60:0,102,1945:0,102,255:40,3 chr1 197059326 . C . PASS END=197059518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:93:45:0,93,1395:0,119,255:40,0 chr1 197059528 . A . PASS END=197059528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,102,255:23,0 chr1 197059976 . T . PASS END=197059976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1251:0,102,255:34,0 chr1 197059980 . C . PASS END=197059980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 197059981 . T . PASS END=197059981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:28,0 chr1 197059982 . G . PASS END=197059994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1213:0,88,255:36,0 chr1 197059995 . T . PASS END=197059995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 197059996 . C . PASS END=197060142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:36:0,87,1296:0,87,255:40,0 chr1 197060143 . T . PASS END=197060143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:33,0 chr1 197060144 . T . PASS END=197060168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:34:0,86,1160:0,86,255:34,0 chr1 197060169 . T . PASS END=197060169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1005:0,58,255:27,0 chr1 197060170 . C . PASS END=197060170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 197060171 . T . PASS END=197060171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:36:0,66,990:0,108,255:22,0 chr1 197061037 . C . PASS END=197061186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:88:33:0,88,1337:0,88,255:40,0 chr1 197062180 . A . PASS END=197062180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 197062182 . T . PASS END=197062182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 197062183 . C . PASS END=197062183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 197062184 . T . PASS END=197062184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:28,0 chr1 197062185 . T . PASS END=197062360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:33:0,84,1182:0,99,255:40,0 chr1 197062361 . G . PASS END=197062375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:25:0,62,906:0,62,255:26,0 chr1 197062376 . A . PASS END=197062376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 197062377 . A . PASS END=197062382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 197062383 . T . PASS END=197062383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr1 197062384 . C . PASS END=197062389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 197062390 . C . PASS END=197062390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 197062391 . T . PASS END=197062391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 197063209 . C . PASS END=197063209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 197063214 . T . PASS END=197063311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,121,255:40,0 chr1 197065081 . T . PASS END=197065081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr1 197065127 . C . PASS END=197065294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:45:0,105,1575:0,119,255:40,0 chr1 197065303 . T . PASS END=197065303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr1 197069561 . C . PASS END=197069583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,109,1468:0,109,255:40,0 chr1 197069584 . T . PASS END=197069584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1350:0,60,255:40,0 chr1 197069585 . A . PASS END=197070404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:40:0,84,1352:0,84,255:40,2 chr1 197070405 . C . PASS END=197070441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,170,255:40,0 chr1 197070442 . G T, 48.92 PASS DP=77;MQ=250.00;MQRankSum=7.494;ReadPosRankSum=3.001;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,34,0:0.442,0.000:77:22,20,0:21,14,0:47:84,0,50,1189,1470,2658:255,0,255:39,0:4.8920e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,16,20,14:18,25,20,14 chr1 197070443 . G . PASS END=197070479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,195,255:40,0 chr1 197070480 . T . PASS END=197070657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:74:0,120,1800:0,199,255:40,0 chr1 197070658 . T . PASS END=197070696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:77:0,120,1800:0,206,255:40,0 chr1 197070697 . T C, 47.00 PASS DP=77;MQ=250.00;MQRankSum=7.401;ReadPosRankSum=2.612;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:46,31,0:0.403,0.000:77:22,18,0:24,13,0:46:82,0,50,1020,1380,2400:255,0,255:40,0:4.6997e+01,1.0846e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,27,10,21:23,23,17,14:197070697 chr1 197070698 . T . PASS END=197070706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:73:0,120,1800:0,212,255:40,0 chr1 197070707 . G A, 47.58 PASS DP=72;MQ=250.00;MQRankSum=7.190;ReadPosRankSum=3.284;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:42,30,0:0.417,0.000:72:20,16,0:22,14,0:46:82,0,50,1072,1473,2545:255,0,255:36,0:4.7576e+01,9.7591e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,28,10,20:22,20,14,16:197070697 chr1 197070708 . A . PASS END=197070746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,167,255:40,0 chr1 197070747 . T . PASS END=197070777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:59:0,120,1800:0,153,255:40,0 chr1 197070778 . C . PASS END=197070814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,143,255:40,0 chr1 197070815 . T C, 233.59 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,34,0:0,28,0:184:271,187,0,2380,187,2380:255,186,0:0,0:2.3359e+02,1.8359e+02,0.0000e+00,4.5000e+02,2.1836e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,31:0,0,37,25 chr1 197070816 . A . PASS END=197070855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,127,255:40,0 chr1 197070856 . G . PASS END=197070860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr1 197070861 . G . PASS END=197070900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,131,255:40,0 chr1 197070901 . A G, 221.09 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,32,0:0,26,0:171:259,174,0,2202,174,2202:255,174,0:0,0:2.2109e+02,1.7109e+02,0.0000e+00,4.5000e+02,2.0586e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,26:0,0,34,24 chr1 197070902 . C . PASS END=197070938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,143,255:40,0 chr1 197070939 . T . PASS END=197072382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:83:40:0,83,1454:0,83,255:40,0 chr1 197072383 . T . PASS END=197072419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,186,255:40,0 chr1 197072420 . T C, 50.00 PASS DP=73;MQ=250.00;MQRankSum=7.326;ReadPosRankSum=1.974;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,39,0:0.534,0.000:73:16,19,0:18,20,0:48:85,0,50,1350,1142,2493:255,0,255:33,0:5.0000e+01,6.7563e-05,5.2555e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,22,10,29:18,16,18,21 chr1 197072421 . T . PASS END=197072457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,187,255:40,0 chr1 197072458 . T . PASS END=197073158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:36:0,93,1303:0,97,255:40,0 chr1 197073159 . C . PASS END=197073195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,146,255:40,0 chr1 197073196 . G A, 48.30 PASS DP=56;MQ=250.00;MQRankSum=6.349;ReadPosRankSum=4.263;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,24,0:0.429,0.000:56:18,12,0:14,12,0:47:83,0,50,858,1114,1973:255,0,255:30,0:4.8298e+01,8.5942e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,18,13,11:20,12,11,13 chr1 197073197 . C . PASS END=197073233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,119,1800:0,119,255:40,0 chr1 197073234 . T . PASS END=197073894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:56:0,120,1800:0,125,255:40,0 chr1 197073895 . T . PASS END=197073931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:87:0,120,1800:0,226,255:40,0 chr1 197073932 . T C, 50.00 PASS DP=88;MQ=250.00;MQRankSum=7.981;ReadPosRankSum=4.845;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,43,0:0.500,0.000:86:27,20,0:16,23,0:48:85,0,50,1532,1407,2939:255,0,255:38,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,19,16,27:18,25,15,28 chr1 197073933 . T . PASS END=197073969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,210,255:40,0 chr1 197073970 . T . PASS END=197074315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:59:0,120,1800:0,167,255:40,0 chr1 197086919 . C . PASS END=197087113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,138,255:40,0 chr1 197087121 . A . PASS END=197087121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 197091045 . C . PASS END=197091173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:62:0,120,1800:0,165,255:40,0 chr1 197091185 . C . PASS END=197091185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr1 197091288 . C . PASS END=197091431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,166,255:40,0 chr1 197091435 . T . PASS END=197091435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr1 197091438 . T . PASS END=197091438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 197091518 . C . PASS END=197091536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,167,255:40,0 chr1 197091537 . A T, 224.11 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,31,0:0,28,0:174:262,177,0,2250,177,2250:255,180,0:0,0:2.2411e+02,1.7411e+02,0.0000e+00,4.5000e+02,2.0888e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,36:0,0,33,26 chr1 197091538 . G . PASS END=197091574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,142,255:40,0 chr1 197091575 . A . PASS END=197091711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:34:0,84,1260:0,92,255:40,0 chr1 197091712 . G . PASS END=197091712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:27,0 chr1 197091713 . T . PASS END=197091714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 197091715 . A . PASS END=197091725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,76,255:24,0 chr1 197093233 . A . PASS END=197093233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 197093240 . C . PASS END=197093461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:46:0,111,1658:0,111,255:40,0 chr1 197094000 . C . PASS END=197094029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,181,255:40,0 chr1 197094030 . C T, 48.78 PASS DP=73;MQ=250.00;MQRankSum=7.260;ReadPosRankSum=5.530;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,31,0:0.425,0.000:73:20,19,0:22,12,0:46:84,0,47,184,184,184:255,0,255:38,0:4.8776e+01,1.0096e-04,5.0000e+01,1.8355e+02,2.1832e+02,1.8656e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,29,16,15:19,23,12,19 chr1 197094031 . C . PASS END=197094067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,150,255:40,0 chr1 197094068 . T . PASS END=197094085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,173,255:40,0 chr1 197094175 . C . PASS END=197094296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:51:0,87,1305:0,130,255:40,0 chr1 197094297 . C . PASS END=197094309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,76,255:26,0 chr1 197094310 . T . PASS END=197094321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,63,255:18,0 chr1 197097605 . A . PASS END=197097605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 197097607 . T . PASS END=197097607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 197097615 . C . PASS END=197097615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 197097619 . C . PASS END=197097767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:31:0,81,1215:0,88,255:40,0 chr1 197097768 . A . PASS END=197097771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 197097772 . A . PASS END=197097778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 197097779 . A . PASS END=197097795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 197097806 . A . PASS END=197097806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 197098317 . C . PASS END=197098447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:52:0,120,1800:0,139,255:40,0 chr1 197099045 . C . PASS END=197099187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:96:32:0,96,1166:0,96,255:40,1 chr1 197101415 . C . PASS END=197101482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:49:0,84,1699:0,84,255:40,0 chr1 197102469 . A . PASS END=197102469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 197102474 . T . PASS END=197102474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 197102478 . A . PASS END=197102478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 197102480 . C . PASS END=197102505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:35:0,99,1485:0,105,255:40,0 chr1 197102506 . T . PASS END=197102708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:32:0,86,1194:0,86,255:40,0 chr1 197102709 . A . PASS END=197102725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1039:0,71,255:26,0 chr1 197102737 . C . PASS END=197102737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 197104220 . G . PASS END=197104221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 197104226 . C . PASS END=197104235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1286:0,89,255:33,0 chr1 197104236 . A . PASS END=197104236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1044:0,71,255:32,0 chr1 197104237 . T . PASS END=197104372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:34:0,102,1286:0,102,255:40,0 chr1 197108897 . C . PASS END=197108899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:32,0 chr1 197108900 . T . PASS END=197108900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 197108901 . T . PASS END=197108907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:32,0 chr1 197108908 . G . PASS END=197108908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:29,0 chr1 197108909 . G . PASS END=197109001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:83:33:0,83,1146:0,83,255:40,0 chr1 197109015 . G . PASS END=197109015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 197111448 . A . PASS END=197111448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 197111461 . C . PASS END=197112411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:54:0,120,1800:0,129,255:40,1 chr1 197112412 . T . PASS END=197112448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,194,255:40,0 chr1 197112449 . G C, 50.00 PASS DP=80;MQ=250.00;MQRankSum=7.684;ReadPosRankSum=3.907;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,42,0:0.525,0.000:80:14,23,0:24,19,0:48:85,0,50,1431,1335,2766:255,0,255:36,0:5.0000e+01,6.6010e-05,5.2827e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,23,17,25:21,17,18,24 chr1 197112450 . C . PASS END=197112532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:60:0,120,1800:0,157,255:40,0 chr1 197112533 . G A, 223.65 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,21,0:0,38,0:174:261,177,0,2224,177,2224:255,180,0:0,0:2.2365e+02,1.7365e+02,0.0000e+00,4.5000e+02,2.0842e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,35:0,0,32,27 chr1 197112534 . G . PASS END=197112570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,152,255:40,0 chr1 197112571 . A . PASS END=197112940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:38:0,96,1440:0,106,255:40,0 chr1 197113077 . A . PASS END=197113077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 197113087 . C . PASS END=197113110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,121,255:40,0 chr1 197113111 . A . PASS END=197113230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:53:0,120,1800:0,130,255:40,0 chr1 197115270 . C . PASS END=197115270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr1 197115271 . C . PASS END=197115271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:25,0 chr1 197115272 . T . PASS END=197115272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 197115273 . G . PASS END=197115273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:26,0 chr1 197115274 . C . PASS END=197115277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1056:0,87,255:29,0 chr1 197115278 . A . PASS END=197115279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:40:30:0,40,945:0,40,255:28,0 chr1 197115280 . G . PASS END=197115280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 197115281 . A . PASS END=197115282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,935:0,76,255:30,0 chr1 197115283 . A . PASS END=197115287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1052:0,93,255:32,0 chr1 197115288 . G . PASS END=197115288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:31,0 chr1 197115289 . C . PASS END=197115307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1191:0,89,255:40,0 chr1 197115308 . A . PASS END=197115308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1266:0,70,255:37,0 chr1 197115309 . G . PASS END=197115411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:83:40:0,83,1341:0,83,255:40,0 chr1 197115412 . G . PASS END=197115412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1350:0,68,255:37,0 chr1 197115413 . A . PASS END=197115502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:34:0,81,1252:0,81,255:39,0 chr1 197115503 . G . PASS END=197115503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 197115504 . C . PASS END=197115567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1233:0,89,255:40,0 chr1 197115577 . G . PASS END=197115577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 197115677 . G . PASS END=197115677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 197115756 . G . PASS END=197115756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1343:0,108,255:36,0 chr1 197115781 . A . PASS END=197115781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:28,0 chr1 197128489 . T . PASS END=197129144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:83:31:0,83,1164:0,83,255:40,0 chr1 197136917 . T . PASS END=197137047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:89:65:0,89,1800:0,89,255:40,0 chr1 197141290 . C . PASS END=197141378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:76:0,120,1800:0,212,255:40,0 chr1 197144140 . T . PASS END=197144245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,99,1457:0,99,255:40,0 chr1 197145140 . T . PASS END=197145144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:79:0,120,1800:0,224,255:40,0 chr1 197145694 . C . PASS END=197145800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:61:0,120,1800:0,166,255:40,0 chr1 197147547 . C . PASS END=197147642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:59:0,120,1800:0,147,255:40,0 chr1 197150118 . C . PASS END=197150213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,110,1800:0,110,255:40,0 chr1 197150214 . A . PASS END=197150245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:81:43:0,81,1215:0,96,255:40,0 chr1 197150246 . A . PASS END=197150246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr1 197150247 . C . PASS END=197150247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,126,255:27,0 chr1 197157422 . C . PASS END=197157549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:34:0,93,1395:0,102,255:40,0 chr1 197157550 . G . PASS END=197157550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 197157551 . T . PASS END=197157555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1194:0,83,255:30,0 chr1 197157556 . G . PASS END=197157556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:26,0 chr1 197157557 . A . PASS END=197157559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 197157560 . T . PASS END=197157560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1009:0,63,255:26,0 chr1 197157561 . C . PASS END=197157565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1125:0,80,255:29,0 chr1 197157566 . A . PASS END=197157566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr1 197157567 . A . PASS END=197157568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 197157569 . T . PASS END=197157569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:28,0 chr1 197159892 . A . PASS END=197159961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:88:0,120,1800:0,224,255:40,0 chr1 197160822 . C . PASS END=197160828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:34,0 chr1 197160829 . C . PASS END=197160829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr1 197160830 . A . PASS END=197160997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:34:0,87,1251:0,92,255:40,0 chr1 197160998 . T . PASS END=197161007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:30:0,69,1035:0,80,255:26,0 chr1 197161008 . C . PASS END=197161012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:18,0 chr1 197161013 . G . PASS END=197161013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:18,0 chr1 197161014 . T . PASS END=197161029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 197168484 . C . PASS END=197168484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 197168485 . T . PASS END=197168486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 197168487 . T . PASS END=197168501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:31,0 chr1 197168502 . T . PASS END=197168502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 197168503 . A . PASS END=197168679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:31:0,90,1350:0,93,255:40,0 chr1 197168680 . C . PASS END=197168680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:52:58:0,52,1699:0,52,255:40,0 chr1 197168681 . T . PASS END=197169603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:30:0,81,1194:0,86,255:40,1 chr1 197237339 . C . PASS END=197237339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 197237348 . G . PASS END=197237348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 197237487 . C . PASS END=197237488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 197237543 . A . PASS END=197237614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:73:0,120,1800:0,186,255:40,0 chr1 197297552 . A . PASS END=197298133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:36:0,80,1294:0,80,255:40,0 chr1 197313410 . G . PASS END=197313414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 197313415 . A . PASS END=197313423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 197313424 . A . PASS END=197313438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 197313439 . A . PASS END=197313441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 197313442 . T . PASS END=197313444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 197313445 . G . PASS END=197313466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:20:0,60,709:0,60,255:26,0 chr1 197313467 . G . PASS END=197313470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 197313471 . C . PASS END=197313471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 197313472 . T . PASS END=197313595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:28:0,83,1019:0,83,255:35,0 chr1 197313596 . G . PASS END=197313596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 197313597 . G . PASS END=197313598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 197313599 . G . PASS END=197313599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 197313600 . A . PASS END=197313606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 197316470 . A . PASS END=197316472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1203:0,91,255:35,0 chr1 197316473 . T . PASS END=197316595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:97:37:0,97,1281:0,97,255:40,0 chr1 197316596 . T . PASS END=197316602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:37:0,66,990:0,111,255:25,0 chr1 197316603 . T . PASS END=197316609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:54:26:0,54,810:0,78,255:19,0 chr1 197325961 . G . PASS END=197325966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,820:0,61,255:26,0 chr1 197325967 . C . PASS END=197326135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:30:0,80,1155:0,80,255:40,0 chr1 197326136 . A . PASS END=197326136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:32,0 chr1 197326137 . T . PASS END=197326143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:33,0 chr1 197326145 . T . PASS END=197326145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,86,255:28,0 chr1 197390115 . T . PASS END=197390115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 197390118 . A . PASS END=197390118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1496:0,104,255:39,0 chr1 197390127 . C . PASS END=197390127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 197390130 . G . PASS END=197390330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,118,1800:0,118,255:40,0 chr1 197390331 . C . PASS END=197390367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,132,255:40,0 chr1 197390368 . A G, 221.10 PASS DP=59;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,34,0:0,24,0:171:259,174,0,2216,174,2216:255,177,0:0,0:2.2110e+02,1.7110e+02,0.0000e+00,4.5000e+02,2.0587e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,31:0,0,31,27 chr1 197390369 . T . PASS END=197390405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,138,255:40,0 chr1 197390406 . C . PASS END=197390826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,88,255:40,0 chr1 197390827 . T . PASS END=197390858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:27:0,60,900:0,63,255:26,0 chr1 197390859 . C . PASS END=197390860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 197390861 . T . PASS END=197390861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 197390862 . C . PASS END=197390866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 197390867 . C . PASS END=197390872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1147:0,77,255:26,0 chr1 197390873 . T . PASS END=197390880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1085:0,80,255:29,0 chr1 197390881 . C . PASS END=197390882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1078:0,74,255:26,0 chr1 197390883 . G . PASS END=197390892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1305:0,105,255:34,0 chr1 197390893 . C . PASS END=197390893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:34,0 chr1 197390894 . A . PASS END=197390930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:95:35:0,95,1272:0,95,255:36,0 chr1 197390931 . T . PASS END=197390931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1146:0,77,255:35,0 chr1 197390932 . C . PASS END=197390933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1365:0,108,255:36,0 chr1 197390934 . C . PASS END=197390934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:35,0 chr1 197390935 . G . PASS END=197391047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:34:0,87,1275:0,87,255:40,0 chr1 197391048 . A . PASS END=197391048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1182:0,71,255:30,0 chr1 197391049 . C . PASS END=197391056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:31,0 chr1 197391057 . G . PASS END=197391082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:24:0,63,925:0,63,255:26,0 chr1 197391083 . A . PASS END=197391083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 197391084 . G . PASS END=197391086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 197396583 . G . PASS END=197397132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:96:32:0,96,1170:0,96,255:40,0 chr1 197398104 . A . PASS END=197398117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:26,0 chr1 197398118 . G . PASS END=197398123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 197398124 . G . PASS END=197398237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1205:0,89,255:40,0 chr1 197398238 . A . PASS END=197398238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 197398579 . T . PASS END=197398714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1296:0,94,255:40,0 chr1 197398715 . A . PASS END=197398744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 197398749 . G . PASS END=197398749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,990:0,68,255:21,0 chr1 197403823 . C . PASS END=197403823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1202:0,100,255:38,0 chr1 197403835 . G . PASS END=197404742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,118,1644:0,118,255:40,0 chr1 197407674 . T . PASS END=197407674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1471:0,104,255:37,0 chr1 197407677 . A . PASS END=197407809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:43:0,112,1410:0,112,255:40,0 chr1 197407814 . C . PASS END=197407815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 197407820 . A . PASS END=197407820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 197411296 . G . PASS END=197411305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1113:0,96,255:34,0 chr1 197411306 . G . PASS END=197411306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:33,0 chr1 197411307 . A . PASS END=197411548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:98:37:0,98,1360:0,98,255:40,0 chr1 197411619 . A . PASS END=197411663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:91:0,120,1800:0,207,255:40,1 chr1 197446678 . T . PASS END=197446683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,162,255:40,0 chr1 197446784 . A . PASS END=197446784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 197446794 . T . PASS END=197447009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:35:0,96,1440:0,105,255:40,0 chr1 197447090 . C . PASS END=197447090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 197447108 . G . PASS END=197447108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 197447125 . A . PASS END=197447125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 197447167 . G . PASS END=197447167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 197447180 . C . PASS END=197447180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 197447270 . A . PASS END=197447270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 197447298 . A . PASS END=197447298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 197447333 . C . PASS END=197447333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 197447336 . A . PASS END=197447336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 197447402 . T . PASS END=197447402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 197447421 . T . PASS END=197447421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 197479590 . T . PASS END=197479902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:83:42:0,83,1382:0,83,255:40,0 chr1 197479903 . A . PASS END=197479903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1462:0,55,255:38,0 chr1 197479904 . G . PASS END=197479915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1423:0,82,255:35,0 chr1 197479916 . T . PASS END=197479916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1264:0,59,255:35,0 chr1 197479917 . G . PASS END=197479917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 197479918 . T . PASS END=197479918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1219:0,56,255:34,0 chr1 197479919 . T . PASS END=197480060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1256:0,81,255:40,0 chr1 197480061 . G . PASS END=197480061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 197480062 . A . PASS END=197480071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 197480072 . G . PASS END=197480073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,1086:0,41,255:27,0 chr1 197480074 . T . PASS END=197480078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:29,0 chr1 197480079 . C . PASS END=197480088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:23,0 chr1 197480089 . G . PASS END=197480102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,57,255:19,0 chr1 197480858 . C . PASS END=197480858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 197480859 . G . PASS END=197480862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:23,0 chr1 197480863 . G . PASS END=197480873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,854:0,61,255:26,0 chr1 197480874 . A . PASS END=197480874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 197480875 . T . PASS END=197480875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 197480876 . G . PASS END=197480878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:32,0 chr1 197480879 . A . PASS END=197480879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:32,0 chr1 197480880 . T . PASS END=197480889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1320:0,96,255:38,0 chr1 197480890 . T . PASS END=197480926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,111,1574:0,113,255:40,0 chr1 197480927 . C T, 50.00 PASS DP=45;MQ=249.70;MQRankSum=5.152;ReadPosRankSum=2.641;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,22,0:0.500,0.000:44:10,14,0:12,8,0:48:85,0,50,749,728,1478:255,0,255:19,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,10,12:17,5,14,8 chr1 197480928 . T . PASS END=197480964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,116,1576:0,116,255:40,0 chr1 197480965 . C . PASS END=197481074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:37:0,93,1191:0,94,255:40,0 chr1 197482001 . T . PASS END=197482083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,102,1530:0,111,255:40,0 chr1 197509094 . C . PASS END=197509201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,137,255:40,0 chr1 197510089 . C . PASS END=197510145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:86:0,120,1800:0,211,255:40,0 chr1 197515052 . A . PASS END=197515120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:38:0,99,1485:0,109,255:40,0 chr1 197515863 . C . PASS END=197515903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:70:0,120,1800:0,196,255:40,0 chr1 197522111 . T . PASS END=197522242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:94:45:0,94,1463:0,94,255:40,0 chr1 197529954 . T . PASS END=197530004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:94:0,120,1800:0,252,255:40,0 chr1 197552282 . C . PASS END=197552383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:42:0,99,1485:0,108,255:40,0 chr1 197564338 . A . PASS END=197564340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1047:0,84,255:32,0 chr1 197564341 . T . PASS END=197564341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:30,0 chr1 197564342 . T . PASS END=197564463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:33:0,87,1228:0,91,255:40,0 chr1 197564875 . C . PASS END=197564877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:113:0,120,1800:0,255,255:40,0 chr1 197576203 . C . PASS END=197576262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:82:0,120,1800:0,214,255:40,0 chr1 197576263 . A . PASS END=197576288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:81:89:0,81,1215:0,254,255:40,0 chr1 197576289 . A . PASS END=197576292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:63:88:0,63,945:0,250,255:26,0 chr1 197576293 . G . PASS END=197576297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:51:86:0,51,765:0,255,255:19,0 chr1 197576298 . T . PASS END=197576301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:30:87:0,30,450:0,222,255:12,0 chr1 197576302 . T . PASS END=197576302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:24:85:0,24,360:0,200,255:7,0 chr1 197576303 . C . PASS END=197576304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:12:85:0,12,180:0,208,255:4,0 chr1 197581061 . C . PASS END=197581106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:69:0,120,1800:0,199,255:40,0 chr1 197586789 . C . PASS END=197586889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:35:0,98,1365:0,98,255:40,0 chr1 197611841 . A . PASS END=197611951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,112,1416:0,112,255:40,0 chr1 197614820 . A . PASS END=197614873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:70:0,120,1800:0,186,255:40,0 chr1 197616185 . C . PASS END=197616244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:61:0,120,1800:0,167,255:40,0 chr1 197621365 . C . PASS END=197621445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,196,255:40,0 chr1 197627430 . C . PASS END=197627499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:65:0,120,1800:0,191,255:40,0 chr1 197641167 . C . PASS END=197641286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:91:39:0,91,1354:0,91,255:40,0 chr1 197643250 . C . PASS END=197643299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,3:94:99:73:0,120,1800:0,212,255:40,0 chr1 197684161 . C . PASS END=197684204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,201,255:40,0 chr1 197704716 . T . PASS END=197704716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 197704717 . C T, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.110;ReadPosRankSum=2.583;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,12,0:0.706,0.000:17:2,4,0:3,8,0:45:85,0,44,421,179,600:255,0,143:5,0:5.0000e+01,1.3953e-04,4.6553e+01,4.2124e+02,2.1365e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,10,2:3,2,6,6 chr1 197704718 . G . PASS END=197704726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:17,0 chr1 197704727 . G . PASS END=197704754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:25,0 chr1 197704755 . G . PASS END=197704767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,986:0,78,255:26,0 chr1 197704778 . C . PASS END=197704926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:35:0,95,1341:0,95,255:40,0 chr1 197741998 . C . PASS END=197742062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,144,255:40,0 chr1 197743617 . C . PASS END=197743777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:31:0,83,1091:0,83,255:40,0 chr1 197744269 . T . PASS END=197744271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 197744272 . G . PASS END=197744277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 197744278 . C . PASS END=197744285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 197751120 . C . PASS END=197751175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,167,255:40,0 chr1 197871780 . A . PASS END=197871783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 197871784 . C . LowGQ END=197871788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr1 197871789 . A . PASS END=197871802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 197871803 . A . PASS END=197871809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 197871810 . G . PASS END=197871835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,296:0,27,255:9,0 chr1 197871836 . C T, 0.01 DRAGENSnpHardQUAL DP=10;MQ=250.00;MQRankSum=1.393;ReadPosRankSum=1.393;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:5,1,0:4,0,0:26:9,0,50,36,322,358:9,0,255:7,0:1.0657e-02,2.6108e+01,7.9108e+01,6.1868e+01,3.8273e+02,3.8672e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,2,1,0:5,4,1,0 chr1 197871837 . G . PASS END=197871848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 197871849 . C . PASS END=197871857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 197871858 . C . PASS END=197871858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 197871859 . T . PASS END=197871868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 197871869 . A . PASS END=197871869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr1 197871870 . G . PASS END=197871872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 197871873 . G . PASS END=197871891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr1 197871892 . G . PASS END=197871898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 197871899 . C . PASS END=197871901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 197871902 . C . PASS END=197871944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:16,0 chr1 197871945 . A . PASS END=197871945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 197871946 . C . PASS END=197871959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 197871960 . G . PASS END=197871961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 197871962 . G . PASS END=197871981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 197871982 . T . PASS END=197871995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 197871996 . A . PASS END=197871996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 197871997 . C . PASS END=197871997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 197871998 . C . LowGQ END=197871998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 197871999 . G . PASS END=197872000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 197872001 . G . PASS END=197872001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 197872002 . G . PASS END=197872004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 197872005 . G . PASS END=197872005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 197872006 . A . PASS END=197872006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 197872007 . G . PASS END=197872021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 197872022 . G . LowGQ END=197872022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:6,0 chr1 197872023 . C . PASS END=197872030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 197872031 . T . PASS END=197872031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:4,0 chr1 197872032 . G . PASS END=197872043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,205:5,0 chr1 197874926 . G . PASS END=197874948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:32:0,96,1194:0,96,255:40,0 chr1 197874949 . T C, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.464;ReadPosRankSum=2.334;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,21,0:0.512,0.000:41:10,13,0:10,8,0:48:85,0,50,751,678,1429:255,0,255:20,0:5.0000e+01,6.5492e-05,5.2928e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,13,8:9,11,11,10 chr1 197874950 . C . PASS END=197874986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:41:0,120,1800:0,123,255:40,0 chr1 197874987 . A . PASS END=197875027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,82,255:40,0 chr1 197876279 . T . PASS END=197876350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:73:0,120,1800:0,219,255:40,0 chr1 197881662 . A . PASS END=197881689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,125,255:40,0 chr1 197885809 . A . PASS END=197885881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:47:0,93,1395:0,115,255:40,0 chr1 197886954 . A . PASS END=197887056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1070:0,80,255:40,0 chr1 197887057 . A . PASS END=197887057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 197887058 . G . PASS END=197887074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1072:0,87,255:29,0 chr1 197887075 . C . PASS END=197887097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:25:0,63,945:0,71,255:27,0 chr1 197887098 . A . PASS END=197887098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 197887099 . A . PASS END=197887103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 197887104 . G . PASS END=197887127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,582:0,48,255:19,0 chr1 197887446 . G . PASS END=197887446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 197887447 . C . PASS END=197887448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 197887449 . T . PASS END=197887449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 197887450 . C . PASS END=197887475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:23,0 chr1 197887476 . A . PASS END=197887493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:19:0,54,810:0,57,255:19,0 chr1 197889102 . G . PASS END=197889126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,352:0,30,255:13,0 chr1 197889127 . A . PASS END=197889130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 197889131 . C . PASS END=197889131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr1 197889132 . G . PASS END=197889134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,665:0,41,255:18,0 chr1 197889135 . C . PASS END=197889140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 197889141 . G . PASS END=197889141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 197889142 . C . PASS END=197889149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 197889150 . G . PASS END=197889150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 197889151 . G . PASS END=197889151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 197889152 . G . PASS END=197889152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 197889153 . G . PASS END=197889153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 197889154 . G . PASS END=197889157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 197889158 . G . PASS END=197889169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 197889170 . G . PASS END=197889185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 197889186 . G . PASS END=197889186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 197889187 . T . PASS END=197889192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr1 197889193 . A . PASS END=197889194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 197889195 . C . PASS END=197889197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 197889198 . T . PASS END=197889203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 197889204 . C . PASS END=197889204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 197889205 . T . PASS END=197889205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:26,0 chr1 197889206 . G . PASS END=197889215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 197889216 . A . PASS END=197889216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 197889217 . A . PASS END=197889217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 197889218 . G . PASS END=197889218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 197889219 . T . PASS END=197889225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:30,0 chr1 197889226 . A . PASS END=197889226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 197889227 . A . PASS END=197889273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr1 197889274 . G . PASS END=197889304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr1 197890434 . A . PASS END=197890438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 197890439 . T . PASS END=197890441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 197890442 . C . PASS END=197890443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 197890444 . G . PASS END=197890459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr1 197890460 . G . PASS END=197890466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 197890467 . C . PASS END=197890591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:27:0,81,980:0,81,255:38,0 chr1 197890592 . G . PASS END=197890593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 197890594 . C . PASS END=197890594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 197890595 . T . PASS END=197890598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:26,0 chr1 197890599 . G . PASS END=197890600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 197890601 . A . PASS END=197890624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,894:0,62,255:26,0 chr1 197890625 . T . PASS END=197890625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 197890626 . C . PASS END=197890649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 197890650 . G . PASS END=197890660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 197890661 . C . PASS END=197890676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 197890677 . G . PASS END=197890677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 197890678 . A . PASS END=197890683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 197890684 . G . PASS END=197890689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 197890690 . G . PASS END=197890692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 197890693 . C . PASS END=197890708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr1 197890709 . G . PASS END=197890736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 197890737 . C . PASS END=197890744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr1 197890745 . G . PASS END=197890748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 197890749 . G . PASS END=197890764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:17,0 chr1 197890765 . G . PASS END=197890781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,592:0,51,255:17,0 chr1 197890782 . C . PASS END=197890789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 197896721 . G . PASS END=197896923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:86:34:0,86,1233:0,86,255:40,0 chr1 197898132 . G . PASS END=197898132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 197898133 . T . PASS END=197898133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 197898134 . T . PASS END=197898144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 197898145 . A . PASS END=197898160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:22,0 chr1 197898161 . C . PASS END=197898161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 197898162 . A . PASS END=197898182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,895:0,69,255:26,0 chr1 197898183 . G . PASS END=197898352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1204:0,82,255:40,0 chr1 197898353 . A . PASS END=197898371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:41:0,81,1107:0,85,255:38,0 chr1 197898372 . T . PASS END=197898372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1048:0,58,255:26,0 chr1 197898373 . T . PASS END=197898374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,91,255:27,0 chr1 197898375 . A . PASS END=197898389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:33:0,63,945:0,66,255:26,0 chr1 197901049 . G . PASS END=197901105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:61:0,120,1800:0,172,255:40,0 chr1 198201711 . A . PASS END=198201767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,150,255:40,0 chr1 198222170 . A . PASS END=198222302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:31:0,83,1164:0,83,255:40,0 chr1 198222303 . A . PASS END=198222304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,976:0,62,255:27,0 chr1 198222305 . G . PASS END=198222306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 198222307 . G . PASS END=198222310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:26,0 chr1 198225458 . G . PASS END=198225619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:37:0,96,1208:0,104,255:40,0 chr1 198231705 . A . PASS END=198231767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:75:0,120,1800:0,209,255:40,0 chr1 198233255 . C . PASS END=198233365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,120,1800:0,130,255:40,0 chr1 198247067 . T . PASS END=198247195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:81:41:0,81,1215:0,114,255:40,0 chr1 198247196 . A . PASS END=198247199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,83,255:26,0 chr1 198248084 . A . PASS END=198248191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:97:46:0,97,1651:0,97,255:40,0 chr1 198259416 . C . PASS END=198259483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:68:0,120,1800:0,159,255:40,0 chr1 198262075 . T . PASS END=198262169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:53:0,120,1800:0,159,255:40,0 chr1 198266257 . A . PASS END=198266370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:52:0,120,1800:0,139,255:40,0 chr1 198288542 . C . PASS END=198288652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,105,1575:0,124,255:40,0 chr1 198492521 . T . PASS END=198492524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr1 198492525 . T . PASS END=198492525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1011:0,62,255:30,0 chr1 198492526 . T . PASS END=198492694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:89:32:0,89,1151:0,89,255:40,0 chr1 198498211 . C . PASS END=198498311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,114,1682:0,114,255:40,0 chr1 198505809 . C . PASS END=198505854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,207,255:40,0 chr1 198509699 . T . PASS END=198509780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1328:0,93,255:40,0 chr1 198608399 . A . PASS END=198608471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:63:0,120,1800:0,159,255:40,0 chr1 198661476 . G . PASS END=198661513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,153,255:40,0 chr1 198663147 . G . LowGQ END=198663215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,22:0,0,33:3,0 chr1 198663216 . G . PASS END=198663228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 198663229 . T . LowGQ END=198663229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 198663230 . T . PASS END=198663260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr1 198663261 . A . PASS END=198663261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,103:0,1,103:5,0 chr1 198663262 . C . PASS END=198663262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 198663263 . C . PASS END=198663263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,161:0,1,161:5,0 chr1 198663264 . A . PASS END=198663273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,180:0,18,180:6,0 chr1 198663274 . G . PASS END=198663290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 198663291 . C . PASS END=198663318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr1 198663319 . A . LowGQ END=198663319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,66:21,0,87:5,0 chr1 198663320 . G . PASS END=198663334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 198663335 . C . PASS END=198663335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 198663336 . A . PASS END=198663356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,166:0,18,166:6,0 chr1 198663357 . G . LowGQ END=198663363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:0:5:0,0,90:0,0,140:2,0 chr1 198665841 . G . PASS END=198666012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:36:0,88,1211:0,88,255:40,0 chr1 198666013 . T . PASS END=198666029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,77,255:25,0 chr1 198666030 . A . PASS END=198666032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:24:0,45,675:0,56,255:15,0 chr1 198666033 . C . PASS END=198666038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:36:21:0,36,540:0,63,255:13,0 chr1 198668693 . G . PASS END=198668714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,762:0,63,255:26,0 chr1 198668715 . T . PASS END=198668748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr1 198668749 . T . PASS END=198668749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 198668750 . C . PASS END=198668765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 198668766 . G . PASS END=198668766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 198668767 . C . PASS END=198668767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 198668768 . A . PASS END=198668769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 198668770 . A . PASS END=198668779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 198668780 . G . PASS END=198668797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 198668798 . A . PASS END=198668798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr1 198668799 . A . PASS END=198668800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 198668801 . T . PASS END=198668804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 198668805 . C . PASS END=198668805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 198668806 . C . PASS END=198668833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,706:0,57,255:19,0 chr1 198671516 . A . PASS END=198671660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:41:0,105,1575:0,107,255:40,0 chr1 198672427 . A . PASS END=198672427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 198672428 . T . PASS END=198672501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1023:0,81,255:39,0 chr1 198672507 . A . PASS END=198672507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,89,255:29,0 chr1 198673598 . C . PASS END=198673598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 198673601 . C . PASS END=198673627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:62:0,120,1800:0,160,255:40,0 chr1 198675863 . A . PASS END=198676081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:43:0,103,1576:0,103,255:40,0 chr1 198677262 . G . PASS END=198677382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,114,1749:0,114,255:40,0 chr1 198677383 . T . PASS END=198677390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,114,1710:0,116,255:40,0 chr1 198678816 . G . PASS END=198678953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:54:0,120,1800:0,141,255:40,0 chr1 198682082 . G . PASS END=198682195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:34:0,87,1305:0,102,255:40,0 chr1 198682196 . A . PASS END=198682196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 198682197 . G . PASS END=198682197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 198682198 . A . PASS END=198682198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:26,0 chr1 198682199 . C . PASS END=198682201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 198685811 . A . PASS END=198685970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:43:0,105,1575:0,129,255:40,0 chr1 198685977 . A . PASS END=198685977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 198687223 . C . PASS END=198687227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 198687228 . A . PASS END=198687230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,654:0,60,255:21,0 chr1 198687231 . C . PASS END=198687231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 198687232 . A . PASS END=198687239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:25,0 chr1 198687240 . A . PASS END=198687240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,856:0,47,255:25,0 chr1 198687241 . A . PASS END=198687250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,901:0,62,255:25,0 chr1 198687251 . C . PASS END=198687252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 198687253 . C . PASS END=198687253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 198687254 . C . PASS END=198687431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:28:0,81,1003:0,84,255:40,0 chr1 198687437 . A . PASS END=198687437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr1 198691545 . G . PASS END=198691605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:82:0,120,1800:0,181,255:40,0 chr1 198697469 . A . PASS END=198697577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1651:0,120,255:40,0 chr1 198698263 . C . PASS END=198698263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr1 198698266 . C . PASS END=198698300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:78:0,120,1800:0,224,255:40,0 chr1 198700442 . G A, 44.54 PASS DP=53;MQ=249.74;MQRankSum=6.046;ReadPosRankSum=3.881;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,20,0:0.377,0.000:53:16,9,0:17,11,0:44:79,0,50,650,1141,1790:255,0,255:32,0:4.4543e+01,1.7422e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,14,7,13:16,17,8,12 chr1 198700746 . A . PASS END=198700855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,142,255:40,0 chr1 198701429 . A . PASS END=198701429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 198701430 . G . PASS END=198701432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 198701433 . T . PASS END=198701495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1246:0,89,255:38,0 chr1 198701496 . A . PASS END=198701496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1187:0,56,255:32,0 chr1 198701497 . C . PASS END=198701519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1218:0,91,255:35,0 chr1 198701609 . A . PASS END=198701685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:47:0,89,1661:0,89,255:40,0 chr1 198701692 . A . PASS END=198701692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 198703325 . G . PASS END=198703343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,163,255:40,0 chr1 198703344 . A . PASS END=198703361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,159,255:40,0 chr1 198703457 . G . PASS END=198703554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:36:0,101,1425:0,101,255:40,0 chr1 198704256 . A . PASS END=198704256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 198704257 . A . PASS END=198704259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 198704260 . A . PASS END=198704293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1125:0,90,255:40,0 chr1 198704294 . C T, 50.00 PASS DP=51;MQ=250.00;MQRankSum=5.971;ReadPosRankSum=3.772;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,31,0:0.608,0.000:51:10,11,0:10,20,0:46:85,0,46,1101,685,1786:255,0,255:19,0:5.0000e+01,1.0044e-04,4.8823e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,21,10:15,5,15,16 chr1 198704295 . A . PASS END=198704331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,134,255:40,0 chr1 198704332 . A . PASS END=198704371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1133:0,80,255:40,0 chr1 198704372 . C . PASS END=198704382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,73,255:23,0 chr1 198710998 . A . PASS END=198710998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:28,0 chr1 198710999 . A . PASS END=198711000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 198711001 . A . PASS END=198711001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 198711002 . A . PASS END=198711009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1048:0,90,255:32,0 chr1 198711010 . G . PASS END=198711010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:31,0 chr1 198711011 . C . PASS END=198711127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:32:0,86,1158:0,86,255:40,0 chr1 198711128 . T . PASS END=198711143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1215:0,103,255:38,0 chr1 198711144 . G . PASS END=198711155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:30:0,60,900:0,73,255:26,0 chr1 198711361 . T . PASS END=198711496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:38:0,93,1395:0,98,255:40,0 chr1 198711500 . T . PASS END=198711500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 198711502 . T . PASS END=198711502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 198713183 . G . PASS END=198713321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:31:0,81,1215:0,93,255:40,0 chr1 198713322 . C . PASS END=198713322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 198713323 . T . PASS END=198713323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 198713324 . G . PASS END=198713325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 198713326 . A . PASS END=198713329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 198713330 . C . PASS END=198713332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:24,0 chr1 198717238 . A . PASS END=198717269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:90:41:0,90,1336:0,90,255:40,0 chr1 198717270 . G . PASS END=198717328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:72:0,120,1800:0,168,255:40,0 chr1 198718545 . A . PASS END=198718666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:34:0,85,1158:0,85,255:40,0 chr1 198718667 . T . PASS END=198718667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1396:0,65,255:31,0 chr1 198718668 . C . PASS END=198718675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,87,255:34,0 chr1 198718676 . A . PASS END=198718678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:35:0,66,1125:0,66,255:25,0 chr1 198719615 . A . PASS END=198719615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 198719621 . A . PASS END=198719750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:36:0,97,1267:0,97,255:40,0 chr1 198719751 . A . PASS END=198719751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1427:0,74,255:35,0 chr1 198719752 . C . PASS END=198719755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:33,0 chr1 198721378 . G . PASS END=198721500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:36:0,108,1313:0,108,255:40,0 chr1 198721723 . A . PASS END=198721725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 198721726 . A . PASS END=198721726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 198721727 . A . PASS END=198721729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 198721730 . A . PASS END=198721730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:28,0 chr1 198721731 . C . PASS END=198721731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 198721732 . T . PASS END=198721732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:28,0 chr1 198721733 . C . PASS END=198721885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:31:0,81,1215:0,93,255:40,0 chr1 198721886 . T . PASS END=198721887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 198721888 . C . PASS END=198721893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1215:0,98,255:28,0 chr1 198721894 . C . PASS END=198721901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:24,0 chr1 198721905 . C . PASS END=198721906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 198723398 . G . PASS END=198723533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:36:0,80,1280:0,80,255:40,0 chr1 198725035 . G . PASS END=198725036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 198725037 . G . PASS END=198725037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 198725038 . C . PASS END=198725039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 198725040 . A . PASS END=198725041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:20,0 chr1 198725042 . A . PASS END=198725044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,854:0,61,255:25,0 chr1 198725045 . A . PASS END=198725045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 198725046 . A . PASS END=198725048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,781:0,75,255:26,0 chr1 198725049 . C . PASS END=198725053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:31,0 chr1 198725054 . A . PASS END=198725054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:29,0 chr1 198725055 . T . PASS END=198725055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 198725056 . G . PASS END=198725056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:28,0 chr1 198725057 . A . PASS END=198725060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:31,0 chr1 198725061 . C . PASS END=198725061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 198725062 . A . PASS END=198725257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:32:0,81,1215:0,96,255:40,0 chr1 198725258 . C . PASS END=198725288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 198725289 . A . PASS END=198725289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 198725290 . G . PASS END=198725299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 198725300 . A . PASS END=198725310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,49,255:19,0 chr1 198776931 . C A, 49.92 PASS DP=64;MQ=249.83;MQRankSum=6.421;ReadPosRankSum=5.293;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,31,0:0.484,0.000:64:19,17,0:14,14,0:48:85,0,50,1109,1165,2281:255,0,255:32,0:4.9923e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,19,14,17:20,13,16,15 chr1 198796120 . C T, 50.00 PASS DP=37;MQ=248.67;MQRankSum=4.947;ReadPosRankSum=1.257;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,24,0:0.649,0.000:37:6,9,0:7,15,0:45:85,0,43,830,465,1295:255,0,255:13,0:5.0000e+01,1.5247e-04,4.5997e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,13,11:7,6,6,18 chr1 198867678 . G T, 194.01 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,27,0:0,22,0:144:232,147,0,1838,147,1838:255,147,0:0,0:1.9401e+02,1.4401e+02,0.0000e+00,4.5000e+02,1.7878e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,26:0,0,25,24 chr1 198868084 . G A, 127.34 PASS DP=27;MQ=246.13;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,15,0:0,12,0:77:165,80,0,980,80,980:255,81,0:0,0:1.2734e+02,7.7338e+01,0.0000e+00,4.5000e+02,1.1211e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,13:0,0,14,13 chr1 198869514 . T C, 262.78 PASS DP=72;MQ=249.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,37,0:0,35,0:213:301,216,0,2717,216,2717:255,219,0:0,0:2.6278e+02,2.1278e+02,0.0000e+00,4.5000e+02,2.4755e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,35:0,0,40,32 chr1 199996976 . A . PASS END=199997039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:69:0,120,1800:0,183,255:40,0 chr1 199998161 . A . PASS END=199998161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 199998162 . T . PASS END=199998162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 199998163 . A . PASS END=199998181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,527:0,45,255:19,0 chr1 199998182 . C . PASS END=199998187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 199998188 . A . PASS END=199998188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 199998189 . G . PASS END=199998193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,730:0,63,255:21,0 chr1 199998194 . G . PASS END=199998194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 199998195 . A . PASS END=199998195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 199998196 . G . PASS END=199998196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,598:0,16,255:18,0 chr1 199998197 . A . PASS END=199998197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 199998198 . G . LowGQ END=199998198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,465:31,0,255:16,0 chr1 199998199 . C . PASS END=199998200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 199998201 . G . PASS END=199998201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,604:0,16,255:18,0 chr1 199998202 . C . PASS END=199998235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,780:0,66,255:23,0 chr1 199998236 . A . PASS END=199998256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 199998257 . A . PASS END=199998293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 199998294 . C . PASS END=199998305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 199998306 . C . PASS END=199998322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:9:0,21,315:0,27,255:9,0 chr1 199998323 . C . PASS END=199998324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:9:0,10,270:0,10,255:6,0 chr1 199998325 . G . PASS END=199998326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 199998327 . C . PASS END=199998327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 199998328 . C . PASS END=199998329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 199998330 . G . PASS END=199998348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:14:6:0,14,225:0,14,188:6,0 chr1 199998349 . C . PASS END=199998349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 199998350 . A . PASS END=199998354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 199998355 . G . PASS END=199998356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 199998357 . A . PASS END=199998357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,233:0,10,233:6,0 chr1 199998358 . C . PASS END=199998359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 199998360 . C . PASS END=199998399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,143:0,18,143:6,0 chr1 199998400 . C . LowGQ END=199998400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,106:15,0,121:4,0 chr1 199998401 . C . PASS END=199998429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,166:0,18,166:6,0 chr1 199998430 . C . PASS END=199998430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 199998431 . C . PASS END=199998438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 200007829 . A . PASS END=200007838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 200007839 . T . PASS END=200007857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 200007858 . T . PASS END=200007858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 200007859 . C . PASS END=200007874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 200007875 . C . PASS END=200007900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 200008786 . G . PASS END=200008790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 200008791 . G . PASS END=200008791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 200008792 . G . PASS END=200008807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:23,0 chr1 200008808 . C . PASS END=200008808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 200008809 . G . PASS END=200008811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 200008812 . T . PASS END=200008812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 200008813 . C . PASS END=200008836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr1 200008837 . T . PASS END=200008837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 200008838 . T . PASS END=200008839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 200008840 . T . PASS END=200008840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:24,0 chr1 200008841 . C . PASS END=200008849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:26,0 chr1 200008850 . C . PASS END=200008850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr1 200008851 . A . PASS END=200008865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,893:0,62,255:24,0 chr1 200008866 . G . PASS END=200008866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:22,0 chr1 200008867 . C . PASS END=200008867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 200008868 . C . PASS END=200008868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 200008869 . C . PASS END=200008881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 200008882 . G . PASS END=200008882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 200008883 . A . PASS END=200008889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 200008890 . G . PASS END=200008891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 200008892 . G . PASS END=200008893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 200008894 . A . PASS END=200008894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 200008895 . A . PASS END=200008895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 200008896 . C . PASS END=200008918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,629:0,41,255:19,0 chr1 200008919 . G . PASS END=200008920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:16,0 chr1 200008921 . A . PASS END=200008923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:21:17:0,21,315:0,51,255:8,0 chr1 200012902 . T . PASS END=200013020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,117,1755:0,127,255:40,0 chr1 200014571 . G . PASS END=200014698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:85:38:0,85,1289:0,85,255:40,0 chr1 200014699 . A . PASS END=200014699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:69:58:0,69,1693:0,69,255:40,0 chr1 200014700 . A . PASS END=200014712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,103,1601:0,103,255:40,0 chr1 200017300 . C . PASS END=200017302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,808:0,80,255:28,0 chr1 200017303 . T . PASS END=200017303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 200017304 . A . PASS END=200017304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1045:0,84,255:28,0 chr1 200017305 . A . PASS END=200017305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 200017306 . G . PASS END=200017306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,862:0,54,255:27,0 chr1 200017307 . G . PASS END=200017314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1028:0,90,255:32,0 chr1 200017315 . G . PASS END=200017316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1086:0,66,255:31,0 chr1 200017317 . A . PASS END=200017324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1174:0,99,255:34,0 chr1 200017325 . A . PASS END=200017325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1074:0,46,255:32,0 chr1 200017326 . G . PASS END=200017327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1205:0,102,255:34,0 chr1 200017328 . A . PASS END=200017328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:32,0 chr1 200017329 . A . PASS END=200017359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:34:0,90,1181:0,91,255:39,0 chr1 200017360 . A . PASS END=200017360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1089:0,67,255:38,0 chr1 200017361 . C . PASS END=200017842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:28:0,81,1205:0,84,255:40,0 chr1 200017843 . A . PASS END=200017843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 200017844 . C . PASS END=200017845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200017846 . A . PASS END=200017846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 200017847 . A . PASS END=200017850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 200017851 . C . PASS END=200017851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:27,0 chr1 200017852 . T . PASS END=200017852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 200017853 . G . PASS END=200017853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 200017854 . A . PASS END=200017857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 200017858 . C . PASS END=200017910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1036:0,80,255:32,0 chr1 200017911 . T . PASS END=200017920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:30:0,62,990:0,62,255:26,0 chr1 200017921 . G . PASS END=200017921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:21,0 chr1 200017922 . T . PASS END=200017937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:24,0 chr1 200017938 . G . PASS END=200017938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 200017939 . A . PASS END=200017942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 200017943 . T . PASS END=200017946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,855:0,56,255:19,0 chr1 200080330 . G . PASS END=200080413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:35:0,99,1485:0,105,255:40,0 chr1 200080414 . A . PASS END=200080439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:84:37:0,84,1260:0,95,255:37,0 chr1 200080440 . T . PASS END=200080449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:35:0,69,1035:0,78,255:25,0 chr1 200089936 . G . PASS END=200090083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:35:0,86,1305:0,86,255:40,0 chr1 200143091 . A . PASS END=200143091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:7:23:0,7,589:0,7,255:21,0 chr1 200143092 . T . PASS END=200143092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr1 200143093 . G . LowGQ END=200143093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,593:0,0,255:21,0 chr1 200143094 . T . PASS END=200143094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,603:0,24,255:22,0 chr1 200143095 . C . LowGQ END=200143095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,568:39,0,255:20,0 chr1 200143096 . A . PASS END=200143099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 200143100 . A . PASS END=200143104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,715:0,42,255:24,0 chr1 200143105 . G . PASS END=200143105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,680:0,19,255:23,0 chr1 200143106 . A . PASS END=200143108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 200143109 . A . PASS END=200143109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:22,0 chr1 200143110 . C . LowGQ END=200143110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,745:0,0,255:22,0 chr1 200143111 . T . PASS END=200143111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:24,0 chr1 200143112 . T . PASS END=200143112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,759:0,28,255:22,0 chr1 200143113 . C . PASS END=200143114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,868:0,61,255:24,0 chr1 200143115 . A . PASS END=200143115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,753:0,28,255:23,0 chr1 200143116 . G . PASS END=200143116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 200143117 . C . PASS END=200143119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,856:0,61,255:25,0 chr1 200143120 . G . PASS END=200143120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:23,0 chr1 200143121 . T . PASS END=200143121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 200143122 . A . PASS END=200143123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 200143124 . A . PASS END=200143124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr1 200143125 . A . PASS END=200143125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr1 200143126 . G . PASS END=200143128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 200143129 . G . PASS END=200143132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 200143133 . A . PASS END=200143133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:25,0 chr1 200143134 . G . PASS END=200143134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 200143135 . G . PASS END=200143135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr1 200143136 . A . PASS END=200143139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 200143140 . A . PASS END=200143140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 200143141 . G . PASS END=200143142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 200143143 . C . PASS END=200143143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 200143144 . A . PASS END=200143146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 200143147 . G . PASS END=200143147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 200143148 . C . PASS END=200143160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1350:0,87,255:40,0 chr1 200143161 . C . PASS END=200143162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:44:0,63,1504:0,63,255:39,0 chr1 200143163 . A . PASS END=200143184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:42:0,85,1476:0,85,255:40,0 chr1 200143185 . G . PASS END=200143185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1606:0,69,255:40,0 chr1 200143186 . C . PASS END=200143243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:94:43:0,94,1504:0,94,255:40,0 chr1 200143244 . T . PASS END=200143280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,110,1501:0,110,255:40,0 chr1 200143281 . C T, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.509;ReadPosRankSum=2.502;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,23,0:0.548,0.000:42:8,11,0:11,12,0:48:85,0,49,815,679,1494:255,0,255:17,0:5.0000e+01,6.9634e-05,5.2214e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,8,15:12,7,12,11 chr1 200143282 . G . PASS END=200143296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,111,255:37,0 chr1 200143297 . A . PASS END=200143302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:34:0,75,1125:0,89,255:26,0 chr1 200143303 . C . PASS END=200143314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr1 200143315 . A . PASS END=200143315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 200143316 . T . PASS END=200143318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:27,0 chr1 200143319 . T . PASS END=200143320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 200143321 . C . PASS END=200143332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,824:0,61,255:25,0 chr1 200143333 . G . PASS END=200143333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:22,0 chr1 200143334 . C . PASS END=200143338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 200376146 . T . PASS END=200376235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1180:0,84,255:38,0 chr1 200376236 . T . PASS END=200376236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1202:0,28,255:33,0 chr1 200376237 . G . PASS END=200376257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:36:0,93,1395:0,101,255:36,0 chr1 200376258 . T . PASS END=200376258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:30,0 chr1 200376259 . G . PASS END=200376340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1166:0,87,255:37,0 chr1 200376341 . A . PASS END=200376341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:33,0 chr1 200376342 . A . PASS END=200376399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,89,255:35,0 chr1 200376400 . T . PASS END=200376400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:26,0 chr1 200376401 . A . PASS END=200376439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1117:0,80,255:32,0 chr1 200376440 . C . PASS END=200376458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1000:0,68,255:27,0 chr1 200376459 . T . PASS END=200376461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200376462 . T . PASS END=200376462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 200376463 . G . PASS END=200376464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 200376465 . C . PASS END=200376479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,984:0,78,255:26,0 chr1 200376480 . G . PASS END=200376480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 200376481 . A . PASS END=200376481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 200376482 . T . PASS END=200376482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200376483 . G . PASS END=200376484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 200376485 . G . PASS END=200376512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1169:0,80,255:30,0 chr1 200376513 . T . PASS END=200376521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1070:0,74,255:25,0 chr1 200376522 . G . PASS END=200376522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 200376523 . A . PASS END=200376523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 200376524 . A . PASS END=200376528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 200376529 . T . PASS END=200376529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr1 200376530 . C . PASS END=200376540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:26,0 chr1 200376541 . G . PASS END=200377449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:33:0,84,1258:0,87,255:40,0 chr1 200377450 . C . PASS END=200377450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:76:54:0,76,1727:0,76,255:40,0 chr1 200377451 . C . PASS END=200378407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1125:0,80,255:40,0 chr1 200378408 . G . PASS END=200378436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 200378437 . C . PASS END=200378437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 200378438 . G . PASS END=200378438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 200378439 . G . PASS END=200378443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 200378444 . C . PASS END=200378451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 200378452 . T . PASS END=200378453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr1 200378454 . A . PASS END=200378472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 200378473 . A . PASS END=200378524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:18,0 chr1 200378525 . C . PASS END=200378544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr1 200378545 . C . PASS END=200378557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 200378558 . A . PASS END=200378558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,233:0,10,233:7,0 chr1 200378559 . G . PASS END=200378564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 200378565 . G . LowGQ END=200378565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 200378566 . G . PASS END=200378578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,266:0,27,255:9,0 chr1 200378579 . G . PASS END=200378579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 200378580 . G . PASS END=200378581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 200378582 . T . PASS END=200378582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:8,0 chr1 200378583 . G . PASS END=200378587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 200378588 . G . PASS END=200378588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 200378589 . G . PASS END=200378589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 200378590 . T . PASS END=200378594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 200378595 . G . PASS END=200378599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 200378600 . T . PASS END=200378600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr1 200378601 . A . PASS END=200378607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,266:0,24,255:8,0 chr1 200378608 . A . LowGQ END=200378608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,227:4,0,231:8,0 chr1 200378609 . T . PASS END=200378609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 200378610 . T . PASS END=200378610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 200378611 . G . PASS END=200378617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 200378618 . A . PASS END=200378618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 200378619 . G . PASS END=200378622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 200378623 . C . PASS END=200378623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 200378624 . G . LowGQ END=200378624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:8,0 chr1 200378625 . G . PASS END=200378640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 200378641 . G . PASS END=200378641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 200378642 . G . PASS END=200378648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:13,0 chr1 200378649 . C . PASS END=200378649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 200378650 . T . PASS END=200378658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 200378659 . G . PASS END=200378659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 200378660 . G . PASS END=200378662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 200378663 . A . PASS END=200378663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 200378664 . A . PASS END=200378667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 200378668 . G . PASS END=200378668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 200378669 . G . PASS END=200378672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 200378673 . T . PASS END=200378673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 200378674 . T . PASS END=200378679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr1 200378680 . T . PASS END=200378680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 200378681 . A . PASS END=200378723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,659:0,41,255:19,0 chr1 200378724 . C . PASS END=200378724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 200378725 . C . PASS END=200378730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 200378731 . T . PASS END=200378731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,2 chr1 200378732 . G . LowGQ END=200378734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,645:6,0,255:18,2 chr1 200378735 . G . PASS END=200378735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 200378736 . C . PASS END=200378738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 200378739 . C . PASS END=200378746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 200378747 . G . PASS END=200378747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 200378748 . C . PASS END=200378748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 200378749 . C . PASS END=200378749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 200378750 . G . PASS END=200378752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 200378753 . A . PASS END=200378753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 200378754 . C . PASS END=200378760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 200378761 . C . PASS END=200378764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr1 200378765 . G . PASS END=200378766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 200378767 . C . PASS END=200378767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:18,0 chr1 200378768 . G . PASS END=200378768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:18,0 chr1 200378769 . G . PASS END=200378784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr1 200378785 . T . PASS END=200378785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:16,0 chr1 200378786 . A . PASS END=200378798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,615:0,40,255:17,0 chr1 200378799 . C . PASS END=200378799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 200378800 . C . PASS END=200378804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 200378805 . C . PASS END=200378805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 200378806 . C . PASS END=200378806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 200378807 . A . PASS END=200378807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 200378808 . C . PASS END=200378810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 200378811 . A . PASS END=200378811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 200378812 . G . PASS END=200378812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,512:0,7,255:14,0 chr1 200378813 . G . PASS END=200378814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 200378815 . A . PASS END=200378815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 200378816 . C . PASS END=200378817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 200378818 . C . PASS END=200378819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:12:17:0,12,496:0,12,255:14,0 chr1 200378820 . C . PASS END=200378821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 200378822 . G . PASS END=200378822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr1 200378823 . C . PASS END=200378824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 200378825 . G . PASS END=200378825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 200378826 . A . PASS END=200378826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 200378827 . T . PASS END=200378828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:13,0 chr1 200378829 . T . PASS END=200378830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:12,0 chr1 200378831 . C . PASS END=200378833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 200522516 . T . PASS END=200522518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 200522519 . C . PASS END=200522528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 200522529 . A . PASS END=200522542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:19,0 chr1 200522543 . G . PASS END=200522545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 200522546 . T . PASS END=200522546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 200522547 . T . PASS END=200522548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 200522549 . C . PASS END=200522553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 200522554 . A . PASS END=200522565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:23,0 chr1 200522566 . G C, 38.10 PASS DP=23;MQ=250.00;MQRankSum=3.536;ReadPosRankSum=3.536;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,6,0:0.261,0.000:23:12,3,0:5,3,0:38:73,0,50,215,600,815:163,0,255:17,0:3.8098e+01,6.9483e-04,5.3001e+01,2.1464e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,4,4,2:12,5,3,3 chr1 200522567 . G . PASS END=200522568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 200522569 . A . PASS END=200522569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 200522570 . T . PASS END=200522575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,914:0,65,255:26,0 chr1 200522576 . A . PASS END=200522603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1150:0,80,255:34,0 chr1 200522604 . C . PASS END=200522892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:92:36:0,92,1248:0,92,255:40,0 chr1 200522893 . A . PASS END=200522893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1606:0,58,255:32,0 chr1 200522894 . T . PASS END=200522895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:45:0,96,1440:0,135,255:32,0 chr1 200523596 . C . PASS END=200523734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:64:0,120,1800:0,167,255:40,0 chr1 200524508 . A . PASS END=200524582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:65:0,120,1800:0,170,255:40,0 chr1 200528458 . C . PASS END=200528570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:42:0,93,1395:0,119,255:40,0 chr1 200528571 . T . PASS END=200528571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:31,0 chr1 200528572 . G . PASS END=200528580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:93:37:0,93,1395:0,107,255:36,0 chr1 200529850 . C . PASS END=200530008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,146,255:40,0 chr1 200534197 . C . PASS END=200534210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:38,0 chr1 200534211 . G . PASS END=200534247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,110,1520:0,110,255:40,0 chr1 200534248 . C T, 43.39 PASS DP=52;MQ=250.00;MQRankSum=5.948;ReadPosRankSum=4.276;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,19,0:0.365,0.000:52:18,10,0:15,9,0:43:78,0,50,651,1164,1815:255,0,255:32,0:4.3392e+01,2.2055e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,21,8,11:15,18,9,10 chr1 200534249 . T . PASS END=200534285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,140,255:40,0 chr1 200534286 . A . PASS END=200534381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1215:0,93,255:40,0 chr1 200534573 . A . PASS END=200534787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:87:31:0,87,1313:0,87,255:40,0 chr1 200534788 . T . PASS END=200534797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr1 200539039 . C . PASS END=200539133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,142,255:40,0 chr1 200544719 . C . PASS END=200544819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:57:0,120,1800:0,165,255:40,0 chr1 200549382 . C . PASS END=200549511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:45:0,120,1800:0,135,255:40,0 chr1 200550329 . C . PASS END=200550422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:72:0,120,1800:0,178,255:40,0 chr1 200555229 . C . PASS END=200555240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,163,255:40,0 chr1 200555241 . T . PASS END=200555355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,161,255:40,0 chr1 200558342 . T . PASS END=200558342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 200558345 . C . PASS END=200558362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,103,1444:0,103,255:40,0 chr1 200558363 . T C, 200.03 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,22,0:0,29,0:150:238,153,0,1926,153,1926:255,162,0:0,0:2.0003e+02,1.5003e+02,0.0000e+00,4.5000e+02,1.8480e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,24:0,0,30,21 chr1 200558364 . T . PASS END=200558400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,107,1800:0,107,255:40,0 chr1 200558401 . G A, 48.65 PASS DP=66;MQ=250.00;MQRankSum=6.925;ReadPosRankSum=0.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,29,0:0.439,0.000:66:16,9,0:21,20,0:47:83,0,50,971,1294,2266:255,0,255:33,0:4.8654e+01,8.1024e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,20,16,13:18,19,14,15 chr1 200558402 . T . PASS END=200558438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:68:0,120,1800:0,157,255:40,0 chr1 200558439 . T . PASS END=200558497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,131,255:40,0 chr1 200559253 . C . PASS END=200559400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,146,255:40,0 chr1 200561208 . T . PASS END=200561368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:44:0,87,1305:0,122,255:40,1 chr1 200562795 . A . PASS END=200562897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,168,255:40,0 chr1 200567365 . C . PASS END=200567549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,120,1800:0,141,255:40,1 chr1 200569178 . C . PASS END=200569241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:84:0,120,1800:0,227,255:40,0 chr1 200569484 . C . PASS END=200569631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:38:0,87,1291:0,97,255:40,0 chr1 200571024 . C . PASS END=200571025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 200571026 . C . PASS END=200571031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1200:0,83,255:30,0 chr1 200571032 . A . PASS END=200571032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 200571033 . A . PASS END=200571196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:32:0,91,1046:0,91,255:40,0 chr1 200572354 . C . PASS END=200572469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:38:0,90,1350:0,104,255:40,0 chr1 200572967 . C . PASS END=200572971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 200572972 . G . PASS END=200572975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 200572976 . A . PASS END=200572976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200572977 . T . PASS END=200572977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 200572978 . C . PASS END=200573083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:33:0,96,1440:0,99,255:40,0 chr1 200574374 . A . PASS END=200574374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,218,255:40,0 chr1 200574411 . C . PASS END=200574518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:83:71:0,83,1800:0,83,255:40,0 chr1 200574992 . C . PASS END=200574996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:89:0,120,1800:0,255,255:40,0 chr1 200574997 . T . PASS END=200575022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,215,255:40,0 chr1 200575874 . A . PASS END=200575926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,179,255:40,0 chr1 200577958 . T . PASS END=200578055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:55:0,120,1800:0,149,255:40,0 chr1 200578056 . C . PASS END=200578056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr1 200583446 . C . PASS END=200583533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,2:97:99:72:0,120,1800:0,186,255:40,0 chr1 200584483 . G . PASS END=200584504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:24,0 chr1 200584505 . T . PASS END=200584505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 200584506 . C . PASS END=200584525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,846:0,72,255:25,0 chr1 200584526 . A . PASS END=200584526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:22,0 chr1 200584527 . G . PASS END=200584527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 200584528 . G . PASS END=200584735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:29:0,87,1041:0,87,255:40,0 chr1 200584736 . C . PASS END=200584737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 200586740 . C . PASS END=200586748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 200586749 . A . PASS END=200586749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 200586750 . A . PASS END=200587837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:31:0,84,1172:0,84,255:40,1 chr1 200587838 . C . PASS END=200587850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:24:0,63,945:0,72,255:23,0 chr1 200587851 . T . PASS END=200587851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 200594029 . T . PASS END=200594041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:42:0,91,1535:0,91,255:40,2 chr1 200594042 . T . PASS END=200594042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1559:0,63,255:40,2 chr1 200594043 . T . PASS END=200594157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:39:0,90,1262:0,90,255:40,0 chr1 200594158 . A . PASS END=200594158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1210:0,61,255:31,0 chr1 200594159 . G . PASS END=200594169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1294:0,92,255:31,0 chr1 200594170 . A . PASS END=200594170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 200594171 . T . PASS END=200594175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 200610236 . T . PASS END=200610384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:38:0,90,1437:0,90,255:40,0 chr1 200613382 . T . PASS END=200613383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 200613384 . A . PASS END=200613391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 200613392 . G . PASS END=200613392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 200613393 . A . PASS END=200613396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,724:0,66,255:22,0 chr1 200613397 . A . PASS END=200613399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:49:22:0,49,686:0,49,255:23,0 chr1 200613400 . T . PASS END=200613413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr1 200613414 . T . PASS END=200613414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:24,0 chr1 200613415 . G . PASS END=200613415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 200613416 . A . PASS END=200613416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,898:0,34,255:25,0 chr1 200613417 . T . PASS END=200613426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:29,0 chr1 200613427 . A . PASS END=200613427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 200613428 . A . PASS END=200613435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:35:0,95,1258:0,95,255:38,0 chr1 200613436 . T . PASS END=200613436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:37,0 chr1 200613437 . C . PASS END=200613626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:36:0,84,1260:0,92,255:40,0 chr1 200613627 . A . PASS END=200613635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:34:0,72,1080:0,95,255:26,0 chr1 200613636 . C . PASS END=200613636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 200613637 . T . PASS END=200613637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:26,0 chr1 200613638 . C . PASS END=200613638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 200613639 . T . PASS END=200613645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 200617567 . C . PASS END=200617683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1141:0,85,255:40,0 chr1 200617684 . T . PASS END=200617689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1019:0,73,255:26,0 chr1 200617690 . T . PASS END=200617690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:22,0 chr1 200617691 . A . PASS END=200617695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:23,0 chr1 200618202 . C . PASS END=200618237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:45:0,108,1509:0,108,255:40,0 chr1 200618238 . T C, 202.58 PASS DP=52;MQ=249.85;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,31,0:0,21,0:153:240,156,0,1941,156,1941:255,156,0:0,0:2.0258e+02,1.5258e+02,0.0000e+00,4.5000e+02,1.8735e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,29:0,0,30,22 chr1 200618239 . G . PASS END=200618275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,141,255:40,0 chr1 200618276 . G . PASS END=200618340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:38:0,81,1215:0,87,255:40,0 chr1 200618341 . A . PASS END=200618354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:25:0,64,939:0,64,255:25,0 chr1 200619553 . A . PASS END=200619567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1133:0,82,255:33,0 chr1 200619568 . T . PASS END=200619571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1203:0,99,255:33,0 chr1 200619572 . T . PASS END=200619572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:31,0 chr1 200619573 . T . PASS END=200619803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:32:0,81,1158:0,82,255:40,0 chr1 200619804 . C . PASS END=200619804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 200628155 . T . PASS END=200628244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,118,1615:0,118,255:40,0 chr1 200633047 . C . PASS END=200633048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 200633049 . T . PASS END=200633049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 200633050 . A . PASS END=200633055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:24,0 chr1 200633056 . T . PASS END=200633057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 200633058 . G . PASS END=200633065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 200633066 . C . PASS END=200633069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 200633070 . A . PASS END=200633070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 200633071 . A . PASS END=200633188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1028:0,84,255:40,0 chr1 200633189 . A . PASS END=200633198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr1 200633199 . C . PASS END=200633199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:21,0 chr1 200633200 . A . PASS END=200633200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:21,0 chr1 200633201 . G . PASS END=200633201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:21,0 chr1 200633202 . A . PASS END=200633204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:22,0 chr1 200633205 . G . PASS END=200633214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,61,255:18,0 chr1 200635065 . C . PASS END=200635071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 200635072 . A . PASS END=200635072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:59:20:0,59,573:0,59,255:20,0 chr1 200635073 . A . PASS END=200635102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,664:0,63,255:26,0 chr1 200635103 . C . PASS END=200635115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 200635116 . T . PASS END=200635116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 200635117 . G . PASS END=200635117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200635118 . A . PASS END=200635118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 200635119 . G . PASS END=200635121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 200635122 . A . PASS END=200635122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 200635123 . G . PASS END=200635143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,96,255:37,0 chr1 200635144 . T . PASS END=200635144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1211:0,70,255:34,0 chr1 200635145 . C . PASS END=200635510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,101,1374:0,101,255:40,0 chr1 200635511 . C . PASS END=200635541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1260:0,98,255:40,0 chr1 200635542 . A . PASS END=200635542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 200635543 . A . PASS END=200635549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,91,255:30,0 chr1 200635550 . T C, 38.77 PASS DP=36;MQ=249.67;MQRankSum=3.820;ReadPosRankSum=2.185;FractionInformativeReads=0.972;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:24,11,0:0.314,0.000:35:16,9,0:8,2,0:39:74,0,50,365,858,1222:255,0,255:17,0:3.8765e+01,5.9878e-04,5.3001e+01,3.6459e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,4,7:15,9,4,7:200635550 chr1 200635551 . G . PASS END=200635559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1153:0,80,255:29,0 chr1 200635560 . T C, 42.72 PASS DP=33;MQ=249.64;MQRankSum=3.730;ReadPosRankSum=0.198;FractionInformativeReads=0.970;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,11,0:0.344,0.000:32:13,9,0:8,2,0:42:77,0,50,365,735,1100:255,0,255:20,0:4.2718e+01,2.5395e-04,5.3000e+01,3.6456e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,5,6:11,10,5,6:200635550 chr1 200635561 . G . PASS END=200635599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1120:0,86,255:34,0 chr1 200635600 . G . PASS END=200635600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 200635601 . G . PASS END=200635601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:31,0 chr1 200635602 . C . PASS END=200635630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,86,255:33,0 chr1 200635631 . C . PASS END=200635633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,1047:0,60,255:26,0 chr1 200635634 . G . PASS END=200635656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:31,0 chr1 200635657 . T . PASS END=200635657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:28,0 chr1 200635658 . C . PASS END=200635670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:30,0 chr1 200635671 . A . PASS END=200635671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 200635672 . C . PASS END=200635687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:34,0 chr1 200635688 . G . PASS END=200635688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:30:36:0,30,1127:0,30,255:29,0 chr1 200635689 . G . PASS END=200635701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:34:0,80,1242:0,80,255:35,0 chr1 200635702 . A . PASS END=200635702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr1 200635703 . T . PASS END=200635724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:35:0,93,1282:0,100,255:38,0 chr1 200635725 . T . PASS END=200635725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1251:0,45,255:35,0 chr1 200635726 . T . PASS END=200635868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:39:0,90,1350:0,97,255:40,0 chr1 200708956 . A . PASS END=200708957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,833:0,78,255:26,0 chr1 200708958 . G . PASS END=200708968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,986:0,80,255:33,0 chr1 200708969 . C . PASS END=200708969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:31,0 chr1 200708970 . A . PASS END=200708978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1178:0,83,255:35,0 chr1 200708979 . G . PASS END=200708979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:33,0 chr1 200708980 . G . PASS END=200709091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:30:0,81,1215:0,89,255:38,0 chr1 200709092 . C . PASS END=200709094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 200729967 . A . PASS END=200729971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr1 200729972 . G . PASS END=200729976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 200729977 . A . PASS END=200729979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,798:0,53,255:21,0 chr1 200729980 . G . PASS END=200729982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 200729983 . A . PASS END=200729983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 200729984 . C . PASS END=200729994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr1 200729995 . A . PASS END=200730108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:27:0,81,942:0,81,255:40,2 chr1 200730109 . A . PASS END=200730109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1674:0,67,255:40,2 chr1 200730110 . A . PASS END=200730210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,86,255:40,0 chr1 200730211 . G . PASS END=200730226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,77,255:25,0 chr1 200776504 . A . PASS END=200776504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,677:0,63,255:21,0 chr1 200776505 . G . PASS END=200776506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:22,0 chr1 200776507 . G . PASS END=200776507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:21,0 chr1 200776508 . C . PASS END=200776508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:2:24:0,2,701:0,2,255:22,0 chr1 200776509 . A . PASS END=200776509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 200776510 . C . PASS END=200776510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:27,0 chr1 200776511 . A . PASS END=200776511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 200776512 . T . PASS END=200776514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,960:0,87,255:29,0 chr1 200776515 . G . PASS END=200776515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:28,0 chr1 200776516 . G . PASS END=200776516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:28,0 chr1 200776517 . C . PASS END=200776517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,912:0,24,255:26,0 chr1 200776518 . C . PASS END=200776518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,922:0,18,255:27,0 chr1 200776519 . A . PASS END=200776519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,978:0,21,255:28,0 chr1 200776520 . T . PASS END=200776520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:30,0 chr1 200776521 . G . LowGQ END=200776521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:0:30:0,0,902:2,0,255:27,0 chr1 200776522 . A . PASS END=200776522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,927:0,59,255:29,0 chr1 200776523 . T . PASS END=200776524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:30,0 chr1 200776525 . G . PASS END=200776525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,947:0,21,255:28,0 chr1 200776526 . A . PASS END=200776526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1132:0,93,255:31,0 chr1 200776527 . T . PASS END=200776528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:31:0,41,979:0,41,255:30,0 chr1 200776529 . C . PASS END=200776532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1172:0,83,255:35,0 chr1 200776533 . C . PASS END=200776533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1271:0,67,255:36,0 chr1 200776534 . A . PASS END=200776539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1329:0,84,255:40,0 chr1 200776540 . G . PASS END=200776540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1596:0,72,255:40,0 chr1 200776541 . C . PASS END=200776561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:95:48:0,95,1635:0,95,255:40,0 chr1 200776562 . G . PASS END=200776562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:71:56:0,71,1791:0,71,255:40,0 chr1 200776563 . T . PASS END=200776566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,152,255:40,0 chr1 200776567 . G . PASS END=200776567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:41:56:0,41,1804:0,41,255:40,0 chr1 200776568 . A . PASS END=200776658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:90:42:0,90,1395:0,90,255:40,0 chr1 200776659 . A . PASS END=200776659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:33,0 chr1 200776660 . A . PASS END=200776665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:36:0,90,1350:0,95,255:31,0 chr1 200784689 . G . PASS END=200784772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,187,255:40,0 chr1 200797701 . T . PASS END=200797733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:77:0,120,1800:0,191,255:40,0 chr1 200801328 . G . PASS END=200801469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:60:0,120,1800:0,151,255:40,0 chr1 200801834 . A . PASS END=200801962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:35:0,81,1215:0,94,255:40,0 chr1 200801963 . C . PASS END=200801963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:28,0 chr1 200801964 . A . PASS END=200801966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 200801967 . C . PASS END=200801967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:25,0 chr1 200801968 . A . PASS END=200801969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 200801970 . A . PASS END=200801973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 200811122 . A . PASS END=200811215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,160,255:40,0 chr1 200813910 . C . PASS END=200813997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,120,1800:0,149,255:40,0 chr1 200816338 . T . PASS END=200816420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:53:0,120,1800:0,123,255:40,0 chr1 200816768 . G . PASS END=200816837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,111,1665:0,114,255:40,0 chr1 200817160 . A . PASS END=200817890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:35:0,87,1169:0,89,255:40,1 chr1 200817891 . C . PASS END=200817893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 200817894 . G . PASS END=200817901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,99,255:29,0 chr1 200817902 . A . PASS END=200817905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 200817906 . C . PASS END=200817907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 200817908 . A . PASS END=200817908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 200817909 . A . PASS END=200817997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1260:0,92,255:40,0 chr1 200817998 . G . PASS END=200817998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1396:0,65,255:38,0 chr1 200817999 . A . PASS END=200818027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,109,1316:0,109,255:40,0 chr1 200818028 . A . PASS END=200818028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1328:0,76,255:39,0 chr1 200818029 . A . PASS END=200818805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:36:0,87,1227:0,87,255:40,0 chr1 200818806 . T . PASS END=200818806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:30,0 chr1 200818807 . T . PASS END=200819353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:34:0,84,1213:0,84,255:40,0 chr1 200819354 . T . PASS END=200819354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:34,0 chr1 200819355 . T . PASS END=200819362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1268:0,97,255:38,0 chr1 200821669 . G . PASS END=200821805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:50:0,120,1800:0,130,255:40,0 chr1 200822403 . G . PASS END=200822623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:41:0,110,1520:0,110,255:40,0 chr1 200823945 . T . PASS END=200824017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,140,255:40,0 chr1 200825138 . A . PASS END=200825253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:45:0,119,1659:0,119,255:40,0 chr1 200826434 . G . PASS END=200826567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:56:0,120,1800:0,136,255:40,1 chr1 200826882 . G . PASS END=200827177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:92:35:0,92,1297:0,92,255:40,1 chr1 200827178 . T . PASS END=200827182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,94,255:25,0 chr1 200827183 . C . PASS END=200827187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:27,0 chr1 200842166 . A . PASS END=200842179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,978:0,72,255:26,0 chr1 200842180 . G . PASS END=200842192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,913:0,81,255:28,0 chr1 200842193 . A . PASS END=200842193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 200842194 . G . PASS END=200842283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1050:0,84,255:38,0 chr1 200842284 . T . PASS END=200842284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1129:0,66,255:30,0 chr1 200842285 . C . PASS END=200842295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 200842296 . C . PASS END=200842299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 200842300 . C . PASS END=200842306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,86,255:28,0 chr1 200842307 . G . PASS END=200842319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 200842320 . T . PASS END=200842328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:28,0 chr1 200842329 . T . PASS END=200842342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,61,255:26,0 chr1 200842343 . G . PASS END=200842362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:19,0 chr1 200842363 . G . PASS END=200842363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 200842364 . C . PASS END=200842389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr1 200842390 . T . PASS END=200842421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr1 200842422 . T . PASS END=200842422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 200842423 . G . PASS END=200842435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 200842436 . A . PASS END=200842436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 200842437 . C . PASS END=200842447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 200842448 . T . PASS END=200842448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 200842449 . G . PASS END=200842465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 200842466 . C . PASS END=200842467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 200842468 . A . PASS END=200842484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr1 200842485 . T . PASS END=200842493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 200842494 . G . PASS END=200842494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 200842495 . C . PASS END=200842501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 200842502 . A . LowGQ END=200842502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:7,0 chr1 200842503 . A . PASS END=200842542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 200842543 . C . PASS END=200842557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr1 200842558 . G . PASS END=200842630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:19,0 chr1 200842631 . G . PASS END=200842639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 200842640 . T . PASS END=200842641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 200842642 . G . PASS END=200842687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 200842688 . C . PASS END=200842688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 200842689 . T . PASS END=200842700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 200842701 . G . PASS END=200842701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 200842702 . G . PASS END=200842705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 200842706 . C . PASS END=200842706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 200842707 . A . PASS END=200842711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 200842712 . C . PASS END=200842714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 200842715 . C . PASS END=200842717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 200842718 . G . PASS END=200842728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 200842729 . C . PASS END=200842729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 200842730 . A . PASS END=200842730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 200842731 . G . PASS END=200842732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 200842733 . C . PASS END=200842733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 200842734 . A . PASS END=200842745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 200842746 . A . PASS END=200842747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,790:0,50,255:19,0 chr1 200842748 . C . PASS END=200842774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr1 200842775 . T . PASS END=200842778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,1 chr1 200842779 . T . PASS END=200842779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:21,0 chr1 200842780 . G . PASS END=200842816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,908:0,66,255:24,0 chr1 200842817 . A . PASS END=200842817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 200842818 . C . PASS END=200842838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,845:0,62,255:24,0 chr1 200842839 . T . PASS END=200842839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 200842840 . C . PASS END=200842843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 200842844 . C . PASS END=200842844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 200842845 . G . PASS END=200842855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 200842856 . C . PASS END=200842856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 200842857 . G . PASS END=200842874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 200842875 . G . PASS END=200842875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 200842876 . G . PASS END=200842892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 200842893 . T . PASS END=200842907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 200842908 . C . PASS END=200842916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 200842917 . G . PASS END=200842919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 200842920 . C . PASS END=200842921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 200842922 . T . PASS END=200842922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,732:0,41,255:21,0 chr1 200842923 . T . PASS END=200842923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 200842924 . T . PASS END=200842924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 200842925 . G . PASS END=200842935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 200842936 . G . PASS END=200842936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 200842937 . C . PASS END=200842937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 200842938 . T . PASS END=200842938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,792:0,41,255:21,0 chr1 200842939 . G . PASS END=200842957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 200842958 . G . PASS END=200842970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,53,255:16,0 chr1 200842971 . T . PASS END=200842973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 200842974 . C . PASS END=200842977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 200842978 . T . PASS END=200842978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 200842979 . C . PASS END=200842979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 200842980 . T . PASS END=200842980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 200842981 . G . PASS END=200843035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:19,0 chr1 200843036 . A . PASS END=200843038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 200843039 . G . PASS END=200843043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 200843044 . C . PASS END=200843060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:24,0 chr1 200843061 . A . PASS END=200843061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:21,0 chr1 200843062 . C . PASS END=200843064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 200843065 . C . PASS END=200843065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 200843066 . T . PASS END=200843150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,847:0,63,255:24,0 chr1 200843151 . T . PASS END=200843155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 200843156 . C . PASS END=200843156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 200843157 . G . PASS END=200843192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 200843193 . A . PASS END=200843193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 200843194 . C . PASS END=200843194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 200843195 . A . PASS END=200843195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 200843196 . G . PASS END=200843201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 200843202 . T . PASS END=200843205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 200843206 . C . PASS END=200843211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 200843212 . C . PASS END=200843230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 200843231 . A . PASS END=200843231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr1 200843232 . C . PASS END=200843240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 200843241 . C . PASS END=200843248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 200843249 . T . PASS END=200843249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 200843250 . A . PASS END=200843250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 200843251 . G . PASS END=200843251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 200860627 . A . PASS END=200860636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 200860637 . G . PASS END=200860639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 200860640 . C . PASS END=200860640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 200860641 . A . PASS END=200860642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 200860643 . A . PASS END=200860643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 200860644 . T . PASS END=200860645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr1 200860646 . T . PASS END=200860646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 200860647 . C . PASS END=200860674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:24,0 chr1 200860675 . C . PASS END=200860675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 200860676 . A . PASS END=200860685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 200860686 . G . PASS END=200860698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 200860699 . C . PASS END=200860699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 200860700 . C . PASS END=200860751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 200860752 . A . PASS END=200860765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,496:0,31,255:13,0 chr1 200860766 . A . PASS END=200860766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 200860767 . A . PASS END=200860770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 200860771 . G . PASS END=200860771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:11,0 chr1 200860772 . C . PASS END=200860772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 200860773 . G . PASS END=200860789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 200860790 . C . PASS END=200860790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 200860791 . G . PASS END=200860821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 200860822 . T . PASS END=200860822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 200860823 . G . PASS END=200860825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 200860826 . A . PASS END=200860829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 200867435 . C . PASS END=200867583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,113,1566:0,113,255:40,0 chr1 200868601 . G . PASS END=200868601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 200868602 . C . PASS END=200868607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 200868608 . C . PASS END=200868608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 200868609 . A . PASS END=200868632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:22,0 chr1 200868633 . C . PASS END=200868633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 200868634 . T . PASS END=200868646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 200868647 . G . PASS END=200868651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 200868652 . A . PASS END=200868703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:26,0 chr1 200868704 . G . PASS END=200868725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 200869232 . G . PASS END=200869236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 200869237 . G . PASS END=200869317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,509:0,45,255:17,0 chr1 200869318 . C . PASS END=200869323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 200869324 . G . PASS END=200869324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 200869325 . G . PASS END=200869336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:12,0 chr1 200869337 . T . PASS END=200869348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 200870065 . G . PASS END=200870067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 200870068 . C . PASS END=200870071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 200870072 . T . PASS END=200870077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 200870078 . G . PASS END=200870105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 200870106 . G . PASS END=200870108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200870109 . G . PASS END=200870131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 200870132 . T . PASS END=200870134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 200870135 . G . PASS END=200870137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 200870138 . T . PASS END=200870139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 200870140 . G . PASS END=200870143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 200870144 . A . PASS END=200870151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 200870152 . A . PASS END=200870152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 200870153 . G . PASS END=200870169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:12,0 chr1 200870170 . C . PASS END=200870171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 200870172 . G . PASS END=200870184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr1 200870185 . A . PASS END=200870197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 200870198 . A . PASS END=200870209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 200870210 . A . PASS END=200870210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 200870211 . G . PASS END=200870214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200870215 . C . PASS END=200870215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 200870216 . T . PASS END=200870284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 200870285 . G . LowGQ END=200870285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:10,0 chr1 200870286 . A . PASS END=200870287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 200876962 . A . PASS END=200877015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:32:0,90,1350:0,96,255:39,0 chr1 200877858 . A . PASS END=200877878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,451:0,36,255:13,0 chr1 200877879 . C . PASS END=200877887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 200877888 . A . PASS END=200877917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 200877918 . C . PASS END=200877918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 200877919 . A . PASS END=200877928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 200877929 . C . PASS END=200877944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,687:0,60,255:22,0 chr1 200877945 . C . PASS END=200877945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 200877946 . A . PASS END=200877951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,890:0,72,255:25,0 chr1 200877952 . A . PASS END=200877959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 200877960 . C . PASS END=200877960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 200877961 . T . PASS END=200877963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 200877964 . G . PASS END=200877965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 200877966 . G . PASS END=200877968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 200877969 . C . PASS END=200877970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 200877971 . G . PASS END=200877971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 200877972 . A . PASS END=200877972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 200877973 . A . PASS END=200877978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 200877979 . T . PASS END=200877979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 200877980 . C . PASS END=200878000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:29,0 chr1 200878001 . A . PASS END=200878001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 200878002 . A . PASS END=200878005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 200878006 . A . PASS END=200878012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,77,255:26,0 chr1 200878013 . C . PASS END=200878018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 200878019 . C . PASS END=200878042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,961:0,68,255:26,0 chr1 200878043 . T . PASS END=200878043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr1 200878044 . C . PASS END=200878047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 200878048 . T . PASS END=200878048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 200878049 . G . PASS END=200878049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 200878050 . A . PASS END=200878050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 200878051 . G . PASS END=200878057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,762:0,66,255:22,0 chr1 200878058 . A . PASS END=200878068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 200878352 . C . PASS END=200878358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 200878359 . G . PASS END=200878369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 200878370 . A . PASS END=200878372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 200878373 . G . PASS END=200878386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 200878387 . C . PASS END=200878397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 200878398 . T . PASS END=200878408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200878409 . G . PASS END=200878417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 200878418 . C . PASS END=200878418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 200878419 . T . PASS END=200878420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 200878421 . C . PASS END=200878423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,541:0,31,255:15,0 chr1 200878424 . C . PASS END=200878425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 200878426 . T . PASS END=200878427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 200878428 . G . PASS END=200878430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 200878431 . C . PASS END=200878431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 200878432 . C . PASS END=200878433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 200878434 . A . PASS END=200878434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 200878435 . T . PASS END=200878468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:17,0 chr1 200878469 . C . PASS END=200878469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 200878470 . A . PASS END=200878474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 200878475 . C . PASS END=200878475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 200878476 . C . PASS END=200878488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,690:0,54,255:18,0 chr1 200878489 . A . PASS END=200878489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 200878490 . G . PASS END=200878492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 200878493 . A . PASS END=200878499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:16:0,33,495:0,34,255:13,0 chr1 200878500 . A . PASS END=200878500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 200878501 . G . PASS END=200878503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr1 200878504 . G . PASS END=200878504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 200878505 . G . PASS END=200878506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 200878507 . G . PASS END=200878507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 200878508 . C . PASS END=200878515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 200878516 . A . PASS END=200878525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 200880581 . G . PASS END=200880586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 200880587 . T . PASS END=200880587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,360:0,22,255:12,0 chr1 200880588 . T . PASS END=200880589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 200880590 . C . PASS END=200880590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 200880591 . T . PASS END=200880600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 200880601 . G . PASS END=200880607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 200880608 . G . PASS END=200880608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 200880609 . G . PASS END=200880620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 200880621 . A . PASS END=200880621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 200880622 . G . PASS END=200880627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 200880628 . T . PASS END=200880628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 200880629 . T . PASS END=200880634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 200880635 . C . PASS END=200880635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 200880636 . C . PASS END=200880639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 200880640 . G . PASS END=200880640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 200880641 . C . PASS END=200880649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:17,0 chr1 200880650 . C . PASS END=200880656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 200880657 . G . PASS END=200880657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 200880658 . T . PASS END=200880659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 200880660 . A . PASS END=200880664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr1 200880665 . G . PASS END=200880670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 200880671 . T . PASS END=200880672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,759:0,47,255:20,0 chr1 200880673 . C . PASS END=200880675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 200880676 . G . PASS END=200880676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 200880677 . C . PASS END=200880678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 200880679 . T . PASS END=200880679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 200880680 . T . PASS END=200880681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:21,0 chr1 200880682 . C . PASS END=200880682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 200880683 . C . PASS END=200880685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 200880686 . G . PASS END=200880690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 200880691 . A . PASS END=200880730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,612:0,44,255:19,0 chr1 200880731 . A . PASS END=200880734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr1 200880735 . A . PASS END=200880735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 200880736 . G . PASS END=200880746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 200880747 . G . PASS END=200880786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,653:0,44,255:19,0 chr1 200880787 . G . PASS END=200880787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 200880788 . C . PASS END=200880817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,615:0,41,255:18,0 chr1 200880818 . C . PASS END=200880818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 200880819 . C . PASS END=200880856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,592:0,51,255:18,0 chr1 200880857 . A . PASS END=200880858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr1 200880859 . C . PASS END=200880859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 200880860 . C . PASS END=200880860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr1 200880861 . G . PASS END=200880861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 200880862 . G . PASS END=200880862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:12,0 chr1 200880863 . C . PASS END=200880863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:12,0 chr1 200880864 . A . PASS END=200880868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:12,0 chr1 200880869 . A . PASS END=200880870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr1 200880871 . A . PASS END=200880871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 200880872 . G . PASS END=200880872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr1 200880873 . C . PASS END=200880875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200880876 . G . PASS END=200880877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr1 200880878 . C . PASS END=200880878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 200880879 . G . PASS END=200880879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 200880880 . C . PASS END=200880886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200880887 . C . PASS END=200880895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 200880896 . A . PASS END=200880896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 200880897 . C . PASS END=200880911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:16,0 chr1 200880912 . T . PASS END=200880913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 200880914 . T . PASS END=200880926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr1 200880927 . C . PASS END=200880928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 200880929 . G . PASS END=200880931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 200880932 . C . PASS END=200880940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr1 200880941 . G . PASS END=200880942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200880943 . C . PASS END=200880958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,513:0,42,255:15,0 chr1 200880959 . G . PASS END=200880959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 200880960 . C . PASS END=200880961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 200880962 . T . PASS END=200880972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 200880973 . A . PASS END=200880977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 200880978 . C T, 43.00 PASS DP=14;MQ=65.02;MQRankSum=-2.133;ReadPosRankSum=1.200;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,9,0:0.643,0.000:14:1,3,0:4,6,0:41:78,0,43,322,171,493:255,0,144:5,0:4.3000e+01,3.3368e-04,4.5732e+01,3.2192e+02,2.0561e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,3,6:3,2,3,6 chr1 200880979 . G . PASS END=200880981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200880982 . G . PASS END=200880982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 200880983 . C . PASS END=200880986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 200880987 . G . PASS END=200880992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 200880993 . G . PASS END=200880994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 200880995 . C . PASS END=200880998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 200880999 . G . PASS END=200880999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 200881000 . C . PASS END=200881004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 200881005 . G . PASS END=200881005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 200881006 . A . PASS END=200881007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 200881008 . G . PASS END=200881008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 200881009 . A . PASS END=200881015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr1 200881016 . C . PASS END=200881019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 200881020 . C . PASS END=200881022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 200881023 . C . PASS END=200881023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 200881024 . T . PASS END=200881027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 200881028 . C . PASS END=200881028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 200881029 . T . PASS END=200881036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 200881037 . T . PASS END=200881037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 200881038 . C . PASS END=200881038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 200881039 . T . PASS END=200881039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr1 200881040 . G . PASS END=200881056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:25,0 chr1 200881057 . G . PASS END=200881057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 200881058 . C . PASS END=200881065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr1 200881066 . G . PASS END=200881066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 200881067 . G . PASS END=200881080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:21,0 chr1 200881081 . A . PASS END=200881081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 200881082 . G . PASS END=200881085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 200881086 . A . PASS END=200881087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,790:0,50,255:21,0 chr1 200881088 . C . PASS END=200881093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 200881094 . A . PASS END=200881095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,859:0,56,255:22,0 chr1 200881096 . G . PASS END=200881097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 200881098 . C . PASS END=200881098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 200881099 . G . PASS END=200881115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 200881116 . G . PASS END=200881117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 200881118 . C . PASS END=200881120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr1 200881121 . G . PASS END=200881121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 200881122 . T . PASS END=200881122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 200881123 . C . PASS END=200881123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 200881124 . C . PASS END=200881125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 200881126 . A . PASS END=200881126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 200881127 . G . PASS END=200881140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,908:0,66,255:24,0 chr1 200881141 . G . PASS END=200881146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 200881147 . A . PASS END=200881169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,71,255:26,0 chr1 200881170 . C . PASS END=200881172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 200881173 . C . PASS END=200881190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,74,255:26,0 chr1 200881191 . C . PASS END=200881191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:23,0 chr1 200881192 . A . PASS END=200881200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr1 200881201 . T . PASS END=200881201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 200881202 . C . PASS END=200881221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 200881222 . T . PASS END=200881222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr1 200881223 . T . PASS END=200881230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 200881231 . A . PASS END=200881231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:22,0 chr1 200881232 . G . PASS END=200881243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 200881244 . A . PASS END=200881265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:17:0,45,675:0,50,255:19,0 chr1 200882665 . G . PASS END=200882678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,757:0,61,255:25,0 chr1 200882679 . T . PASS END=200882679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:24,0 chr1 200882680 . G . PASS END=200882682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 200882683 . C . PASS END=200882683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 200882684 . T . PASS END=200882684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 200882685 . G . PASS END=200882698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 200882699 . A . PASS END=200882699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr1 200882700 . T . PASS END=200882702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200882703 . G . PASS END=200882709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 200882710 . G . PASS END=200882714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 200882715 . A . PASS END=200882725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 200882726 . C . PASS END=200882726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200882727 . T . PASS END=200882740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 200882741 . T . PASS END=200882741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,817:0,26,255:23,0 chr1 200882742 . C . PASS END=200882757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:25,0 chr1 200942649 . C . PASS END=200942678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:16,0 chr1 200942679 . G . PASS END=200942682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 200942683 . C . PASS END=200942699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr1 200942700 . C . PASS END=200942706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200943223 . T . PASS END=200943232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr1 200943233 . G . PASS END=200943254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:23,0 chr1 200943255 . C . PASS END=200943255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 200943256 . C . PASS END=200943275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:24,0 chr1 200943276 . A . PASS END=200943276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 200943277 . G . PASS END=200943296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,831:0,69,255:24,0 chr1 200943297 . A . PASS END=200943297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 200943298 . A . PASS END=200943308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 200943309 . T . PASS END=200943309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 200943310 . T . PASS END=200943310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,738:0,30,255:20,0 chr1 200943311 . A . PASS END=200943316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:22,0 chr1 200943317 . C . PASS END=200943317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 200943318 . A . PASS END=200943319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 200943320 . T . PASS END=200943320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 200943321 . C . PASS END=200943322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr1 200943842 . C . PASS END=200943844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 200943845 . G . PASS END=200943853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:26,0 chr1 200943854 . A . PASS END=200943857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,881:0,81,255:27,0 chr1 200943858 . T . PASS END=200943858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 200943859 . A . PASS END=200943962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,995:0,80,255:38,0 chr1 200943963 . G . PASS END=200943963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 200943964 . G . PASS END=200943965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 200943966 . A . PASS END=200943979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr1 200943980 . A . PASS END=200943980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 200943981 . T . PASS END=200943999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 200944000 . G . PASS END=200944011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 200944012 . C . PASS END=200944041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:12:0,32,382:0,32,255:13,0 chr1 200944627 . C . PASS END=200944630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 200944631 . A . PASS END=200944678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1002:0,81,255:35,0 chr1 200944679 . G . PASS END=200944679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:35,0 chr1 200944680 . A . PASS END=200944753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1200:0,87,255:38,0 chr1 200944754 . G . PASS END=200944766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 200944767 . T . PASS END=200944767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 200944768 . G . PASS END=200944780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:26,0 chr1 200944781 . T . PASS END=200944781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:23,0 chr1 200944782 . C . PASS END=200944797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 200945904 . C . PASS END=200945974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:18,0 chr1 200945975 . A . PASS END=200945985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:16:0,36,540:0,48,255:13,0 chr1 200945986 . C . PASS END=200945990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 200945991 . G . PASS END=200946002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 200946003 . C . PASS END=200946021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 200946340 . C . PASS END=200946342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 200946343 . C . PASS END=200946343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 200946344 . T . PASS END=200946369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 200946370 . C . PASS END=200946370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 200946371 . C . PASS END=200946382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:19,0 chr1 200946383 . A . PASS END=200946388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 200946389 . T . PASS END=200946452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,43,255:19,0 chr1 200946453 . A . PASS END=200946460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr1 200946461 . A . PASS END=200946461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 200946462 . T . PASS END=200946479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 200946480 . C . PASS END=200946490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 200946491 . C . PASS END=200946504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 200948663 . G . PASS END=200948680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:23,0 chr1 200948681 . T . PASS END=200948681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 200948682 . T . PASS END=200948684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 200948685 . C . PASS END=200948685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr1 200948686 . T . PASS END=200948688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr1 200948689 . G . PASS END=200948689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 200948690 . T . PASS END=200948690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:28,0 chr1 200948691 . C . PASS END=200948693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 200948694 . G . PASS END=200948694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 200948695 . G . PASS END=200948698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 200948699 . T . PASS END=200948699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 200948700 . C . PASS END=200948707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1164:0,93,255:34,0 chr1 200948708 . T . PASS END=200948708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1119:0,71,255:32,0 chr1 200948709 . T . PASS END=200948719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1249:0,89,255:33,0 chr1 200948720 . G . PASS END=200948720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr1 200948721 . T . PASS END=200948783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1221:0,81,255:36,0 chr1 200948784 . G . PASS END=200948784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 200948785 . G . PASS END=200948821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr1 200948822 . T . PASS END=200948822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 200948823 . T . PASS END=200948829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr1 200948830 . C . PASS END=200948830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 200948831 . T . PASS END=200948838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 200948839 . T . PASS END=200948839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 200948840 . C . PASS END=200948843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 200950088 . C . PASS END=200950134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,770:0,63,255:26,0 chr1 200950135 . A . PASS END=200950135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 200950136 . T . PASS END=200950159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,856:0,61,255:25,0 chr1 200950160 . T . PASS END=200950163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 200950164 . G . PASS END=200950176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 200950177 . G . PASS END=200950177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 200950178 . G . PASS END=200950188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,61,255:22,0 chr1 200950189 . G . PASS END=200950224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,601:0,46,255:19,0 chr1 200952184 . C . PASS END=200952196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr1 200952197 . A . PASS END=200952197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 200952198 . C . PASS END=200952201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1097:0,93,255:31,0 chr1 200952202 . G . PASS END=200952202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 200952203 . A . PASS END=200952205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 200952206 . A . PASS END=200952206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 200952207 . G . PASS END=200952211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1125:0,80,255:29,0 chr1 200952212 . T . PASS END=200952212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 200952213 . G . PASS END=200952217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 200952218 . C . PASS END=200952222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1031:0,71,255:24,0 chr1 200953987 . T . PASS END=200953997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 200953998 . T . PASS END=200953998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 200953999 . G . PASS END=200954003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 200954004 . C . PASS END=200954004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 200954005 . T . PASS END=200954063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,870:0,69,255:25,0 chr1 200954064 . A . PASS END=200954074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 200954075 . G . PASS END=200954075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 200954076 . G . PASS END=200954093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 200954094 . T . PASS END=200954097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 200954098 . G . PASS END=200954100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 200955972 . C . PASS END=200956046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1122:0,83,255:37,0 chr1 200956124 . A . PASS END=200956126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,698:0,46,255:19,0 chr1 200956127 . G . PASS END=200956127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 200956128 . T . PASS END=200956128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 200956129 . G . PASS END=200956132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 200956133 . C . PASS END=200956133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr1 200956134 . C . PASS END=200956136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 200956137 . G . PASS END=200956141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 200956142 . G . PASS END=200956142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 200956143 . G . PASS END=200956157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr1 200956158 . G . PASS END=200956162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 200956163 . A . PASS END=200956163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,903:0,70,255:27,0 chr1 200956164 . C . PASS END=200956181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1115:0,83,255:33,0 chr1 200956182 . G . PASS END=200956182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:32,0 chr1 200956183 . G . PASS END=200956250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:34,0 chr1 200956251 . T . PASS END=200956251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:32,0 chr1 200956252 . C . PASS END=200956262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1110:0,91,255:35,0 chr1 200956263 . T . PASS END=200956264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:67:39:0,67,1286:0,67,255:35,0 chr1 200956265 . T . PASS END=200956276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1252:0,94,255:36,0 chr1 200956277 . C . PASS END=200956277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr1 200956278 . C . PASS END=200956285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1280:0,92,255:35,0 chr1 200956286 . T . PASS END=200956286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:32,0 chr1 200956287 . C . PASS END=200956287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 200956288 . A G, 50.00 PASS DP=36;MQ=247.00;MQRankSum=4.072;ReadPosRankSum=2.547;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,22,0:0.611,0.000:36:6,10,0:8,12,0:47:85,0,46,721,464,1185:255,0,255:13,0:5.0000e+01,9.5779e-05,4.9184e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,13,9:6,8,9,13 chr1 200956289 . G . PASS END=200956310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1278:0,92,255:35,0 chr1 200956311 . C . PASS END=200956311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:28,0 chr1 200956312 . A . PASS END=200956313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1224:0,83,255:28,0 chr1 200956314 . A . PASS END=200956314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr1 200956315 . C . PASS END=200956317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 200956318 . T . PASS END=200956318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,937:0,60,255:26,0 chr1 200956319 . T . PASS END=200956319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 200956320 . T . PASS END=200956325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,82,255:24,0 chr1 200956326 . C . PASS END=200956326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:22,0 chr1 200956327 . G . PASS END=200956329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:23,0 chr1 200957424 . C . PASS END=200957481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:42:0,88,1488:0,88,255:40,0 chr1 200957621 . C . PASS END=200957631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1241:0,89,255:34,0 chr1 200957632 . G . PASS END=200957632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 200957633 . A . PASS END=200957640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1249:0,89,255:33,0 chr1 200957641 . G . PASS END=200957642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr1 200957643 . T . PASS END=200957643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 200957644 . C . PASS END=200957650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,1035:0,60,255:26,0 chr1 200957651 . T . PASS END=200957651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:24,0 chr1 200957652 . C . PASS END=200957652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1002:0,24,255:21,0 chr1 200957653 . T . PASS END=200957653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:22,0 chr1 200957654 . G . PASS END=200957654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 200957655 . T . PASS END=200957655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:22,0 chr1 200957656 . G . PASS END=200957656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 200957657 . C . PASS END=200957657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,945:0,37,255:21,0 chr1 200957658 . T . PASS END=200957658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,914:0,7,255:21,0 chr1 200957659 . G . PASS END=200957660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:22,0 chr1 200957661 . C . PASS END=200957661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,836:0,31,255:21,0 chr1 200957662 . G . PASS END=200957663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:25:0,48,825:0,48,255:22,0 chr1 200957664 . A . PASS END=200957664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,803:0,25,255:18,0 chr1 200957665 . G . LowGQ END=200957665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,792:2,0,255:19,0 chr1 200957666 . C . PASS END=200957666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 200957667 . C . LowGQ END=200957668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:0:26:0,0,761:0,0,255:19,0 chr1 200957669 . T . PASS END=200957669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 200957670 . T . PASS END=200957670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:12:26:0,12,712:0,12,255:15,0 chr1 200957671 . C . PASS END=200957671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,773:0,25,255:13,0 chr1 200957672 . T . PASS END=200957672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:11:25:0,11,773:0,11,255:12,0 chr1 200957894 . C . PASS END=200957904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 200957905 . T . PASS END=200957928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:18,0 chr1 200957929 . G . PASS END=200957983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,806:0,63,255:26,0 chr1 200957984 . A . PASS END=200957988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 200957989 . G . PASS END=200958004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr1 200958005 . T . PASS END=200958005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200958006 . C . PASS END=200958006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 200958007 . A . PASS END=200958010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200958011 . G . PASS END=200958044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,831:0,69,255:26,0 chr1 200958045 . T . PASS END=200958055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 200958056 . G . PASS END=200958059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 200959070 . C . PASS END=200959070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 200959071 . T . PASS END=200959089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1173:0,90,255:33,0 chr1 200959090 . G . PASS END=200959122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:33,0 chr1 200959123 . G . PASS END=200959123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 200959124 . G . PASS END=200959134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 200959135 . T . PASS END=200959157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,62,255:25,0 chr1 200959158 . G . PASS END=200959159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr1 200959160 . G . PASS END=200959162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 200959163 . C . PASS END=200959163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr1 200959164 . A . PASS END=200959166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 200959167 . T . PASS END=200959171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 200959266 . C . PASS END=200959269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 200959270 . G . PASS END=200959270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 200959271 . T . PASS END=200959277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 200959278 . C . PASS END=200959278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 200959279 . A . PASS END=200959290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 200959291 . G . PASS END=200959291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr1 200959292 . T . PASS END=200959299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 200959300 . C . PASS END=200959300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 200959301 . A . PASS END=200959301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 200959302 . G A, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=1.876;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:2,3,0:6,6,0:48:85,0,50,322,286,608:255,0,255:8,0:5.0000e+01,6.5751e-05,5.2874e+01,3.2182e+02,3.2090e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,5,4:6,2,3,6 chr1 200959303 . T . PASS END=200959322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,690:0,44,255:19,0 chr1 200959323 . G . PASS END=200959328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:23,0 chr1 200959329 . A . PASS END=200959329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 200959330 . A . PASS END=200959338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 200959339 . G . PASS END=200959339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 200959340 . C . PASS END=200959363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,884:0,69,255:25,0 chr1 200959364 . G . PASS END=200959364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 200959365 . C . PASS END=200959372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 200959373 . G . PASS END=200959424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 200959425 . C . PASS END=200959436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 200959437 . C . PASS END=200959437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 200959438 . A . PASS END=200959460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 200959704 . C . PASS END=200959725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:26,0 chr1 200959726 . G . PASS END=200959731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 200959732 . A . PASS END=200959732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:25,0 chr1 200959733 . G . PASS END=200959758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1113:0,85,255:36,0 chr1 200959759 . A . PASS END=200959759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:34,0 chr1 200959760 . C . PASS END=200959851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:33:0,80,1158:0,80,255:40,0 chr1 200960045 . C . PASS END=200960047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 200960048 . G . PASS END=200960048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 200960049 . C . PASS END=200960057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:24,0 chr1 200960058 . T . PASS END=200960058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 200960059 . G . PASS END=200960059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 200960060 . C . PASS END=200960069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 200960070 . T . PASS END=200960070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:27,0 chr1 200960071 . G . PASS END=200960071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 200960072 . G . PASS END=200960092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1147:0,80,255:32,0 chr1 200960093 . A . PASS END=200960093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:30,0 chr1 200960094 . A . PASS END=200960140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,955:0,82,255:33,0 chr1 200960141 . C . PASS END=200960141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 200960142 . G . PASS END=200960152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 200960153 . T . PASS END=200960156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr1 200960157 . C . PASS END=200960157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 200960158 . C . PASS END=200960181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,71,255:25,0 chr1 200960182 . C . PASS END=200960182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 200960183 . A . PASS END=200960183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:26,0 chr1 200960184 . C . PASS END=200960186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 200960187 . C . PASS END=200960214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:25,0 chr1 200960215 . T . PASS END=200960231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,57,255:19,0 chr1 200960232 . C . PASS END=200960232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 200960233 . C . PASS END=200960258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,46,255:19,0 chr1 200960259 . G . PASS END=200960269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 200960270 . G . PASS END=200960272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 200960273 . G . LowGQ END=200960273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:9,0 chr1 200960274 . A . PASS END=200960277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 200960785 . C . PASS END=200960809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1299:0,92,255:37,0 chr1 200960810 . A . PASS END=200960810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1388:0,73,255:38,0 chr1 200960811 . T . PASS END=200960847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1429:0,104,255:40,0 chr1 200960848 . C . PASS END=200960853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:37,0 chr1 200961410 . C . PASS END=200961413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr1 200961414 . T . PASS END=200961414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 200961415 . G . PASS END=200961417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 200961418 . G . PASS END=200961418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr1 200961419 . C . PASS END=200961425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,936:0,81,255:28,0 chr1 200961426 . T . PASS END=200961426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 200961427 . C . PASS END=200961429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:31,0 chr1 200961430 . T . PASS END=200961430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr1 200961431 . C . PASS END=200961441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1149:0,93,255:32,0 chr1 200961442 . C . PASS END=200961442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr1 200961443 . G . PASS END=200961480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1164:0,83,255:32,0 chr1 200961481 . G . PASS END=200961499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:26,0 chr1 200961500 . C . PASS END=200961500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 200961501 . T . PASS END=200961517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 200965324 . C . PASS END=200965324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,776:0,20,255:22,0 chr1 200965325 . T . PASS END=200965325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:23,0 chr1 200965326 . T . PASS END=200965343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,886:0,72,255:24,0 chr1 200965344 . C . PASS END=200965344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 200965345 . C . PASS END=200965356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,853:0,62,255:26,0 chr1 200965357 . T . PASS END=200965410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,989:0,81,255:32,0 chr1 200965411 . C . PASS END=200965446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,986:0,78,255:26,0 chr1 200965447 . G . PASS END=200965455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 200965456 . C . PASS END=200965456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:27,0 chr1 200965457 . C . PASS END=200965489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1052:0,80,255:31,0 chr1 200965490 . T . PASS END=200965490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,926:0,60,255:27,0 chr1 200965491 . T . PASS END=200965491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 200965492 . G . PASS END=200965492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 200965493 . G . PASS END=200965501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 200965502 . T . PASS END=200965508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,62,255:21,0 chr1 200965509 . A . PASS END=200965523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,674:0,50,255:19,0 chr1 200967512 . T . PASS END=200967526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,861:0,62,255:26,0 chr1 200967527 . C . PASS END=200967527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 200967528 . A . PASS END=200967624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,956:0,81,255:34,0 chr1 200967625 . T . PASS END=200967625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 200967626 . T . PASS END=200967635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 200967636 . G . PASS END=200967649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 200967650 . G . PASS END=200967670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,939:0,78,255:26,0 chr1 200967671 . T . PASS END=200967674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:26:0,57,855:0,78,255:19,0 chr1 200967675 . G . PASS END=200967675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 200967676 . T . PASS END=200967679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 200967680 . C . PASS END=200967686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr1 200967687 . C G, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.708;ReadPosRankSum=3.441;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,16,0:0.696,0.000:23:4,8,0:3,8,0:38:85,0,35,572,221,794:255,0,180:5,0:5.0001e+01,7.6914e-04,3.7771e+01,4.5000e+02,2.5623e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,7,4,12:3,4,8,8 chr1 200967688 . G . PASS END=200967703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:22,0 chr1 200968477 . C . PASS END=200968594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,146,255:40,0 chr1 200969011 . C . PASS END=200969012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 200969013 . C . PASS END=200969013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 200969014 . C . PASS END=200969017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr1 200969018 . G . PASS END=200969018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:23,0 chr1 200969019 . C . PASS END=200969050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,878:0,62,255:25,0 chr1 200969051 . T . PASS END=200969051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr1 200969052 . G . PASS END=200969064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,714:0,72,255:25,0 chr1 200969065 . C . PASS END=200969065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:23,0 chr1 200969066 . C . PASS END=200969069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,923:0,75,255:25,0 chr1 200969070 . T . PASS END=200969070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:22,0 chr1 200969071 . T . PASS END=200969083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 200969084 . T . PASS END=200969084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 200969085 . T . PASS END=200969092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 200969518 . C . PASS END=200969521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 200969522 . T . PASS END=200969522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 200969523 . C . PASS END=200969539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,831:0,62,255:26,0 chr1 200969540 . C . PASS END=200969544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr1 200969545 . T . PASS END=200969545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 200969546 . T . PASS END=200969552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 200969553 . C . PASS END=200969553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 200969554 . C . PASS END=200969556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 200969557 . T . PASS END=200969557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 200969558 . C . PASS END=200969559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 200969560 . A . PASS END=200969584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,976:0,65,255:26,0 chr1 200969585 . C . PASS END=200969585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200969586 . C . PASS END=200969647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,68,255:26,0 chr1 200969648 . C . PASS END=200969658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr1 200969659 . T . PASS END=200969659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,628:0,13,255:14,0 chr1 200969660 . A . PASS END=200969671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:17,0 chr1 200969672 . C . PASS END=200969672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr1 200969673 . C . PASS END=200969685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:16,0 chr1 200969686 . A . PASS END=200969688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 200969689 . C . PASS END=200969694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 200969695 . C . PASS END=200969695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 200969696 . G . PASS END=200969715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,43,255:18,0 chr1 200969716 . T . PASS END=200969716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 200969717 . C . PASS END=200969728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:17,0 chr1 200969729 . G . PASS END=200969736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,657:0,41,255:17,0 chr1 200969845 . C . PASS END=200969883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1209:0,86,255:35,0 chr1 200969884 . G . PASS END=200969892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:27,0 chr1 200969893 . G . PASS END=200969893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 200969894 . C . PASS END=200969901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 200969902 . C . PASS END=200969908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 200971289 . C . PASS END=200971290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 200971291 . G . PASS END=200971293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 200971294 . T . PASS END=200971294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 200971295 . T . PASS END=200971303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 200971304 . G . PASS END=200971304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 200971305 . C . PASS END=200971319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,967:0,87,255:30,0 chr1 200971320 . G . PASS END=200971356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1141:0,93,255:37,0 chr1 200971357 . A . PASS END=200971357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 200971358 . T . PASS END=200971406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1194:0,83,255:36,0 chr1 200971407 . C . PASS END=200971417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,1070:0,60,255:25,0 chr1 200971418 . C . PASS END=200971423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 200971424 . C . PASS END=200971424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 200971425 . T . PASS END=200971426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 200971427 . G . PASS END=200971427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 200971428 . G . PASS END=200971430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 200971431 . C . PASS END=200971434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:23,0 chr1 200971435 . T . PASS END=200971468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 200971469 . C . PASS END=200971469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 200971470 . T . PASS END=200971471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 200971472 . G . PASS END=200971472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 200971473 . C . PASS END=200971478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 200972207 . C . PASS END=200972215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,177,255:40,0 chr1 200972714 . C . PASS END=200972904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:38:0,114,1421:0,114,255:40,0 chr1 200972905 . T . PASS END=200972905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1637:0,75,255:40,0 chr1 200972906 . C . PASS END=200972909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 200973468 . C . PASS END=200973481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1402:0,98,255:37,0 chr1 200973482 . C . PASS END=200973482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr1 200973483 . G . PASS END=200973575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,89,255:40,0 chr1 200973576 . A . PASS END=200973583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,93,255:26,0 chr1 200973894 . C . PASS END=200973909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:13,0 chr1 200973910 . G . PASS END=200973913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 200973914 . T . PASS END=200973914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200973915 . G . PASS END=200973977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:16,0 chr1 200973978 . C . PASS END=200973983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:13,0 chr1 200973984 . G . PASS END=200973996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:14,0 chr1 200973997 . G . PASS END=200974061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr1 200974436 . C . PASS END=200974522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1055:0,84,255:40,0 chr1 200974523 . G . PASS END=200974523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr1 200974524 . C . PASS END=200974559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,89,255:35,0 chr1 200974560 . C . PASS END=200974560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr1 200974561 . A . PASS END=200974563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 200974564 . G . PASS END=200974564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:32,0 chr1 200974565 . G . PASS END=200974570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:33,0 chr1 200974673 . C . PASS END=200974673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 200974674 . T . PASS END=200974674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr1 200974675 . C . PASS END=200974676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 200974677 . T . PASS END=200974677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 200974678 . C . PASS END=200974678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 200974679 . C . PASS END=200974680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:30,0 chr1 200974681 . G . PASS END=200974811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1030:0,81,255:40,0 chr1 200974812 . T . PASS END=200974822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,74,255:25,0 chr1 200977897 . C . PASS END=200977900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr1 200977901 . A . PASS END=200977901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 200977902 . G . PASS END=200977904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr1 200977905 . A . PASS END=200977905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr1 200977906 . C . PASS END=200977911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 200977912 . G . PASS END=200977912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr1 200977913 . C . PASS END=200977913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 200977914 . T . PASS END=200977914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:26,0 chr1 200977915 . G . PASS END=200978022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1092:0,87,255:40,0 chr1 200978023 . C . PASS END=200978023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr1 200978024 . T . PASS END=200978054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:34,0 chr1 200978055 . T . PASS END=200978073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:24:0,60,900:0,72,255:26,0 chr1 200978074 . C . PASS END=200978079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 200978394 . C . PASS END=200978411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1047:0,84,255:34,0 chr1 200978412 . C T, 50.00 PASS DP=34;MQ=249.35;MQRankSum=4.405;ReadPosRankSum=1.630;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,19,0:0.559,0.000:34:12,7,0:3,12,0:48:85,0,49,672,536,1208:255,0,255:15,0:5.0000e+01,7.0928e-05,5.1979e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,12,7:10,5,6,13 chr1 200978413 . G . PASS END=200978449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:34:0,91,1266:0,91,255:40,0 chr1 200978450 . T . PASS END=200978566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,91,255:40,0 chr1 200978567 . T . PASS END=200978599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,860:0,61,255:26,0 chr1 200978600 . A . PASS END=200978604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 200978605 . T . PASS END=200978605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 200978606 . G . PASS END=200978616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:18,0 chr1 200992471 . C . PASS END=200992477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 200992478 . C . PASS END=200992482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 200992483 . T . PASS END=200992484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,374:0,25,255:12,0 chr1 200992485 . G . PASS END=200992490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,466:0,39,255:13,0 chr1 200992491 . G . PASS END=200992497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 200992498 . C . PASS END=200992498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 200992499 . C . PASS END=200992511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 201008699 . A . PASS END=201008699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 201008707 . A . PASS END=201008707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201008776 . G . PASS END=201008776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 201008789 . C . PASS END=201008789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 201008825 . C . PASS END=201008825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr1 201008850 . C . PASS END=201008850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 201008872 . C . PASS END=201008872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 201008959 . T . PASS END=201008970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:18,0 chr1 201008971 . A . PASS END=201008979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 201008980 . G . PASS END=201008981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201008982 . T . PASS END=201008982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,376:0,25,255:13,0 chr1 201008983 . C . PASS END=201008983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 201008984 . T . PASS END=201008984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 201008985 . C . PASS END=201008986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 201008987 . T . PASS END=201008987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 201008988 . G . PASS END=201008997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:17,0 chr1 201008998 . G . PASS END=201008998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 201008999 . T . PASS END=201009012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,570:0,40,255:19,0 chr1 201009013 . G . PASS END=201009019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,892:0,66,255:23,0 chr1 201009020 . G . PASS END=201009020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 201009021 . A . PASS END=201009043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,848:0,69,255:24,0 chr1 201009044 . A . PASS END=201009044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 201009045 . G . PASS END=201009055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 201009056 . A . PASS END=201009056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 201009057 . T . PASS END=201009061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 201009062 . T . PASS END=201009063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:21,0 chr1 201009064 . T . PASS END=201009075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:23,0 chr1 201009076 . T . PASS END=201009076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 201009077 . C . PASS END=201009079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201009080 . T . PASS END=201009080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 201009081 . T . PASS END=201009087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 201009088 . C . PASS END=201009088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 201009089 . T . PASS END=201009092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 201009093 . T . PASS END=201009093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr1 201009094 . T . PASS END=201009094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 201009095 . G . PASS END=201009095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 201009096 . C . PASS END=201009097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201009098 . A . PASS END=201009147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,546:0,40,255:19,0 chr1 201009148 . G . PASS END=201009148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 201009149 . C . PASS END=201009152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr1 201009153 . T . PASS END=201009178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 201009179 . G . PASS END=201009179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 201009180 . C . PASS END=201009210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,255:0,21,255:9,0 chr1 201009359 . C . PASS END=201009367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,658:0,43,255:18,0 chr1 201009368 . C . PASS END=201009378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:23,0 chr1 201009379 . T . PASS END=201009379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 201009380 . A . PASS END=201009395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr1 201009396 . C . PASS END=201009399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 201009400 . A . PASS END=201009401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 201009402 . G . PASS END=201009409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:31,0 chr1 201009410 . C . PASS END=201009411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1103:0,77,255:30,0 chr1 201009412 . T . PASS END=201009462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1119:0,80,255:33,0 chr1 201009463 . T . PASS END=201009463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr1 201009464 . C . PASS END=201009467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201009468 . C . PASS END=201009503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,984:0,65,255:26,0 chr1 201009750 . C . PASS END=201009757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr1 201009758 . G . PASS END=201009771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 201009772 . T . PASS END=201009782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 201009783 . C . PASS END=201009785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 201009786 . T . PASS END=201009792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201009793 . T . PASS END=201009795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201009796 . G . PASS END=201009799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201009800 . G . PASS END=201009808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 201009809 . T . PASS END=201009841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,514:0,51,255:19,0 chr1 201009844 . G . PASS END=201009844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 201010632 . C . PASS END=201010639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,639:0,54,255:19,0 chr1 201010640 . C . PASS END=201010641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201010642 . G . PASS END=201010644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201010645 . G . PASS END=201010662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,876:0,66,255:24,0 chr1 201010663 . T . PASS END=201010667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201010668 . T . PASS END=201010717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,914:0,72,255:26,0 chr1 201010719 . T . PASS END=201010719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 201012409 . C . PASS END=201012409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 201012410 . T . PASS END=201012410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 201012411 . G . PASS END=201012419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:29,0 chr1 201012420 . A . PASS END=201012420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:28,0 chr1 201012421 . T . PASS END=201012422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201012423 . G . PASS END=201012423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 201012424 . C . PASS END=201012424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1084:0,87,255:29,0 chr1 201012425 . T . PASS END=201012425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,984:0,32,255:26,0 chr1 201012426 . G . PASS END=201012431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1172:0,90,255:32,0 chr1 201012432 . A . PASS END=201012432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 201012433 . T . PASS END=201012538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1129:0,80,255:40,0 chr1 201012539 . A . PASS END=201012539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 201012540 . C . PASS END=201012546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201012547 . T . PASS END=201012547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 201012548 . C . PASS END=201012548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201012549 . T . PASS END=201012554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,931:0,67,255:26,0 chr1 201012555 . C . PASS END=201012559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201012560 . T . PASS END=201012560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:26,0 chr1 201012561 . C . PASS END=201012565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201012566 . C . PASS END=201012566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 201012567 . A . PASS END=201012568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 201012569 . A . PASS END=201012569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,814:0,70,255:26,0 chr1 201012570 . C . PASS END=201012570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201012571 . T . PASS END=201012571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 201012572 . G . PASS END=201012574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201012575 . G . PASS END=201012576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201012577 . G . PASS END=201012578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 201012579 . T . PASS END=201012579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201012580 . C . PASS END=201012580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201012581 . T . PASS END=201012581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 201012582 . C . PASS END=201012583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201012584 . G . PASS END=201012596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1025:0,73,255:26,0 chr1 201012597 . G A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.295;ReadPosRankSum=2.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,14,0:0.538,0.000:26:3,6,0:9,8,0:48:85,0,50,501,427,928:255,0,255:9,0:5.0000e+01,6.7045e-05,5.2663e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,6,8:6,6,8,6 chr1 201012598 . G . PASS END=201012605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,862:0,61,255:23,0 chr1 201012606 . G . PASS END=201012634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:19,0 chr1 201012635 . C . PASS END=201012638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 201012639 . G . PASS END=201012639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 201012640 . C . PASS END=201012643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 201012644 . A . PASS END=201012646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 201012647 . G . PASS END=201012647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 201012648 . G . PASS END=201012650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201012651 . T . PASS END=201012651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 201012652 . C . PASS END=201012659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr1 201012661 . T . PASS END=201012661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 201013456 . C . PASS END=201013544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1260:0,90,255:40,0 chr1 201013545 . T . PASS END=201013545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 201013546 . C . PASS END=201013548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 201013549 . G . PASS END=201013572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 201013573 . C . PASS END=201013573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 201013574 . C . PASS END=201013575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 201013576 . C . PASS END=201013584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:46:21:0,46,714:0,46,255:18,0 chr1 201016237 . G . PASS END=201016237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201016243 . C . PASS END=201016247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:26,0 chr1 201016248 . T . PASS END=201016341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:37,0 chr1 201016342 . G . PASS END=201016342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:27,0 chr1 201016343 . A . PASS END=201016347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr1 201016348 . C . PASS END=201016357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,77,255:25,0 chr1 201016358 . A . PASS END=201016367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:21:0,48,720:0,50,255:19,0 chr1 201016649 . C . PASS END=201016649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 201016651 . A . PASS END=201016651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 201016653 . C . PASS END=201016654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr1 201016655 . C . PASS END=201016659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1132:0,90,255:31,0 chr1 201016660 . T . PASS END=201016660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 201016661 . G . PASS END=201016732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1157:0,84,255:39,0 chr1 201016733 . T . PASS END=201016733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:29,0 chr1 201016734 . C . PASS END=201016740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 201016741 . C . PASS END=201016754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:25,0 chr1 201017707 . C . PASS END=201017707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 201017710 . C . PASS END=201017718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:24,0 chr1 201017719 . T . PASS END=201017719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:23,0 chr1 201017720 . G . PASS END=201017732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 201017733 . G . PASS END=201017748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr1 201017749 . A . PASS END=201017749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,942:0,51,255:28,0 chr1 201017750 . G . PASS END=201017798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:34,0 chr1 201017799 . A . PASS END=201017799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 201017800 . T . PASS END=201017804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 201017805 . A . PASS END=201017805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 201017806 . C . PASS END=201017807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 201017808 . A . PASS END=201017812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 201018131 . C . PASS END=201018137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 201018138 . G . PASS END=201018138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 201018139 . C . PASS END=201018185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1108:0,87,255:31,0 chr1 201018186 . C . PASS END=201018186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 201018187 . T . PASS END=201018196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 201018197 . G . PASS END=201018218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1008:0,68,255:26,0 chr1 201018219 . A . PASS END=201018219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 201018220 . T . PASS END=201018227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:23,0 chr1 201019517 . T . PASS END=201019518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201019519 . A . PASS END=201019519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 201019520 . G . PASS END=201019532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:24,0 chr1 201019533 . A . PASS END=201019536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 201019537 . T . PASS END=201019540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr1 201019541 . C . PASS END=201019543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201019544 . A . PASS END=201019544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 201019545 . T . PASS END=201019596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1138:0,80,255:33,0 chr1 201019597 . G . PASS END=201019597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 201019598 . A . PASS END=201019607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 201019608 . A . PASS END=201019616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 201019617 . T . PASS END=201019617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 201019618 . G . PASS END=201019631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 201019632 . A . PASS END=201019632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 201019633 . G . PASS END=201019644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 201019647 . G . PASS END=201019647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201019649 . A . PASS END=201019649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201020111 . C . PASS END=201020128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:19,0 chr1 201020129 . T . PASS END=201020142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 201020143 . A . PASS END=201020150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:24,0 chr1 201020151 . G . PASS END=201020152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 201020153 . A . PASS END=201020159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 201020160 . G . PASS END=201020167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 201020168 . C . PASS END=201020168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 201020169 . A . PASS END=201020234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1097:0,84,255:34,0 chr1 201020235 . C . PASS END=201020248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:24:0,72,870:0,72,255:24,0 chr1 201020249 . G . PASS END=201020249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,778:0,41,255:21,0 chr1 201020250 . C . PASS END=201020253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201020254 . G . PASS END=201020254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 201020255 . C . PASS END=201020259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 201020260 . C . PASS END=201020271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,52,255:19,0 chr1 201021672 . G . PASS END=201021672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1365:0,108,255:36,0 chr1 201021685 . C . PASS END=201021776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:42:0,105,1465:0,105,255:40,0 chr1 201022337 . C . PASS END=201022338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 201022339 . G . PASS END=201022339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:23,0 chr1 201022340 . C . PASS END=201022352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,870:0,72,255:25,0 chr1 201022353 . G . PASS END=201022355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 201022356 . T . PASS END=201022356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr1 201022357 . A . PASS END=201022366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,984:0,65,255:26,0 chr1 201022367 . G . PASS END=201022369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201022370 . C . PASS END=201022394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:26,0 chr1 201022395 . G . PASS END=201022395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 201022396 . G . PASS END=201022402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 201022587 . C . PASS END=201022597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 201022598 . T . PASS END=201022601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 201022602 . G . PASS END=201022616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,961:0,65,255:26,0 chr1 201022617 . G . PASS END=201022618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 201022619 . T . PASS END=201022619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,940:0,56,255:26,0 chr1 201022620 . T . PASS END=201022629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 201022630 . T . PASS END=201022630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1076:0,55,255:28,0 chr1 201022631 . C . PASS END=201022634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 201022635 . C . PASS END=201022635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 201022636 . C . PASS END=201022670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 201022671 . C . PASS END=201022679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1123:0,77,255:26,0 chr1 201022680 . G . PASS END=201022688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 201022689 . G . PASS END=201022690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 201022691 . A . PASS END=201022691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201022692 . G . PASS END=201022703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 201022704 . C . PASS END=201022715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:20:0,48,720:0,49,255:19,0 chr1 201023633 . A . PASS END=201023654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1025:0,87,255:29,0 chr1 201023655 . A . PASS END=201023655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 201023656 . G . PASS END=201023658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 201023659 . A . PASS END=201023659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:27,0 chr1 201023660 . A . PASS END=201023673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1119:0,83,255:31,0 chr1 201023674 . T . PASS END=201023674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 201023675 . G . PASS END=201023676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 201023677 . A . PASS END=201023677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr1 201023678 . G . PASS END=201023681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 201023682 . A . PASS END=201023682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,995:0,62,255:29,0 chr1 201023683 . G . PASS END=201023686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1087:0,93,255:31,0 chr1 201023687 . A . PASS END=201023687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 201023688 . G . PASS END=201023689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr1 201027530 . A . PASS END=201027530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 201027535 . C . PASS END=201027610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:40:0,81,1215:0,104,255:40,0 chr1 201027611 . A . PASS END=201027615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:38:0,78,1170:0,98,255:26,0 chr1 201027616 . A . PASS END=201027617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 201027618 . C . PASS END=201027618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1164:0,66,255:28,0 chr1 201027619 . C . PASS END=201027619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 201027621 . T . PASS END=201027621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201028316 . C . PASS END=201028320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1031:0,71,255:27,0 chr1 201028321 . G . PASS END=201028418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1197:0,89,255:40,0 chr1 201028419 . G . PASS END=201028419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:26,0 chr1 201028420 . T . PASS END=201028420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 201028421 . T . PASS END=201028427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr1 201029719 . T . PASS END=201029719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 201029783 . T . PASS END=201029783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 201029786 . C . PASS END=201029944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:35:0,93,1395:0,98,255:40,0 chr1 201030395 . C . PASS END=201030400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:24,0 chr1 201030401 . C . PASS END=201030401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 201030402 . T . PASS END=201030410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:25,0 chr1 201030411 . T . PASS END=201030528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,1031:0,81,255:40,0 chr1 201030529 . T . PASS END=201030529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:46:49:0,46,1149:0,46,255:37,0 chr1 201030530 . C . PASS END=201030596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1169:0,80,255:40,0 chr1 201031072 . T . PASS END=201031081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr1 201031082 . C . PASS END=201031087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 201031088 . A . PASS END=201031088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,893:0,67,255:26,0 chr1 201031089 . G . PASS END=201031134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1049:0,87,255:31,0 chr1 201031135 . A . PASS END=201031135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:29,0 chr1 201031136 . A . PASS END=201031140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 201031141 . A . PASS END=201031141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 201031142 . A . PASS END=201031152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1119:0,90,255:30,0 chr1 201031153 . A . PASS END=201031153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 201031154 . C . PASS END=201031158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 201031159 . T . PASS END=201031194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,760:0,63,255:26,0 chr1 201031195 . T . PASS END=201031218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 201031590 . C . PASS END=201031590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr1 201031591 . T . PASS END=201031605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1090:0,82,255:32,0 chr1 201031606 . T . PASS END=201031606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1080:0,66,255:28,0 chr1 201031607 . C . PASS END=201031607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1125:0,82,255:29,0 chr1 201031608 . A . PASS END=201031608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1088:0,55,255:29,0 chr1 201031609 . T . PASS END=201031609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:30,0 chr1 201031610 . C . PASS END=201031628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1022:0,82,255:32,0 chr1 201031629 . C . PASS END=201031629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:30,0 chr1 201031630 . T . PASS END=201031630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 201031631 . G . PASS END=201031631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,982:0,43,255:28,0 chr1 201031632 . A . PASS END=201031633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1109:0,93,255:31,0 chr1 201031634 . G . PASS END=201031634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1041:0,62,255:30,0 chr1 201031635 . A . PASS END=201031636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1066:0,93,255:31,0 chr1 201031637 . C . PASS END=201031637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 201031638 . T . PASS END=201031638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1170:0,93,255:31,0 chr1 201031639 . T . PASS END=201031639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,927:0,59,255:29,0 chr1 201031640 . C . PASS END=201031642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 201031644 . T . PASS END=201031644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1030:0,93,255:31,0 chr1 201034966 . C . PASS END=201035003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,833:0,62,255:26,0 chr1 201035004 . G . PASS END=201035004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201035005 . T . PASS END=201035005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 201035006 . A . PASS END=201035022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 201035023 . C . PASS END=201035028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1069:0,71,255:27,0 chr1 201035029 . G . PASS END=201035038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 201035039 . G . PASS END=201035070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,67,255:26,0 chr1 201035071 . G . PASS END=201035073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 201035357 . C . PASS END=201035418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1113:0,89,255:37,0 chr1 201035419 . T . PASS END=201035419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1164:0,66,255:33,0 chr1 201035420 . C . PASS END=201035444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1235:0,86,255:34,0 chr1 201036015 . T . PASS END=201036119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:31:0,93,1186:0,93,255:40,0 chr1 201036120 . A . PASS END=201036120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:31,0 chr1 201036121 . T . PASS END=201036121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 201038265 . C . PASS END=201038304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1077:0,80,255:37,0 chr1 201038305 . A . PASS END=201038305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:34,0 chr1 201038306 . T . PASS END=201038325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1272:0,92,255:36,0 chr1 201038595 . G . PASS END=201038595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 201038600 . C . PASS END=201038649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:34:0,88,1187:0,88,255:40,0 chr1 201038650 . C . PASS END=201038686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:61:0,120,1800:0,150,255:40,0 chr1 201038687 . A G, 50.00 PASS DP=67;MQ=249.29;MQRankSum=6.599;ReadPosRankSum=1.575;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,38,0:0.567,0.000:67:19,19,0:10,19,0:48:85,0,48,1358,1037,2395:255,0,255:29,0:5.0000e+01,7.4552e-05,5.1453e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,16,22:16,13,21,17 chr1 201038688 . A . PASS END=201038724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:49:0,120,1800:0,145,255:40,0 chr1 201038725 . G . PASS END=201038729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:46:0,120,1800:0,122,255:40,0 chr1 201038732 . G . PASS END=201038732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 201039400 . T . PASS END=201039413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr1 201039414 . G . PASS END=201039414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 201039415 . A . PASS END=201039425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 201039426 . G . PASS END=201039426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 201039427 . G . PASS END=201039432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 201039433 . G . PASS END=201039433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 201039434 . C . PASS END=201039439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 201039440 . G . PASS END=201039440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 201039441 . A . PASS END=201039449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 201039450 . G . PASS END=201039492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,243:0,24,243:9,0 chr1 201039493 . G . PASS END=201039493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 201039494 . G . PASS END=201039502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 201039503 . G . PASS END=201039504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 201039505 . A . PASS END=201039505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr1 201039506 . T . PASS END=201039509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,243:6,0 chr1 201039510 . A . LowGQ END=201039510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,139:12,0,151:4,0 chr1 201039511 . G . PASS END=201039532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,158:6,0 chr1 201041883 . C . PASS END=201041952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:57:0,120,1800:0,157,255:40,0 chr1 201042676 . C . PASS END=201042681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,846:0,80,255:27,0 chr1 201042682 . C . PASS END=201042682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr1 201042683 . A . PASS END=201042692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:31,0 chr1 201042693 . A . PASS END=201042693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:30,0 chr1 201042694 . T . PASS END=201042754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1073:0,80,255:36,0 chr1 201042755 . C . PASS END=201042758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 201042759 . T . PASS END=201042764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201042765 . A . PASS END=201042770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1014:0,68,255:26,0 chr1 201043634 . T . PASS END=201043635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 201043636 . G . PASS END=201043636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 201043637 . G . PASS END=201043649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 201043650 . G A, 49.38 PASS DP=14;MQ=250.00;MQRankSum=3.034;ReadPosRankSum=2.001;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,6,0:0.429,0.000:14:6,3,0:2,3,0:48:84,0,50,215,286,501:190,0,255:8,0:4.9376e+01,7.1964e-05,5.3000e+01,2.1450e+02,3.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,4,2:4,4,1,5 chr1 201043651 . T . PASS END=201043663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 201043664 . G . PASS END=201043664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 201043665 . C . PASS END=201043687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,545:0,48,255:19,0 chr1 201043688 . A . PASS END=201043707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,657:0,41,255:19,0 chr1 201043708 . G . PASS END=201043708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 201043709 . T . PASS END=201043730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr1 201043731 . A . PASS END=201043736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 201043737 . T . PASS END=201043748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 201044610 . C . PASS END=201044610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1197:0,81,255:35,0 chr1 201044622 . C . PASS END=201044622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:33:44:0,33,1261:0,33,255:37,0 chr1 201044623 . A . PASS END=201044623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 201044624 . G . LowGQ END=201044624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,7:44:0:44:0,0,1177:6,0,255:36,0 chr1 201044625 . T . PASS END=201044626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1410:0,93,255:40,0 chr1 201044627 . G . PASS END=201044627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:41:46:0,41,1349:0,41,255:40,0 chr1 201044628 . C . PASS END=201044628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:27:47:0,27,1341:0,27,255:40,0 chr1 201044629 . C . PASS END=201044632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,108,1600:0,108,255:40,0 chr1 201044633 . G . PASS END=201044633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:48:49:0,48,1493:0,48,255:40,0 chr1 201044634 . A . PASS END=201044634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,114,1611:0,114,255:40,0 chr1 201044635 . C . PASS END=201044635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:42:49:0,42,1488:0,42,255:40,0 chr1 201044636 . G . PASS END=201044640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:83:49:0,83,1651:0,83,255:40,0 chr1 201044641 . G . PASS END=201044641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:54:51:0,54,1563:0,54,255:40,0 chr1 201044642 . G . PASS END=201044710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:84:50:0,84,1693:0,84,255:40,0 chr1 201044711 . C . PASS END=201044743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,114,1710:0,125,255:40,0 chr1 201046042 . G . PASS END=201046042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201046045 . T . PASS END=201046045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201046048 . C . PASS END=201046054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 201046055 . A . PASS END=201046069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:30,0 chr1 201046070 . T . PASS END=201046070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 201046071 . G . PASS END=201046086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1149:0,83,255:32,0 chr1 201046087 . G . PASS END=201046088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 201046089 . T . PASS END=201046089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1138:0,86,255:31,0 chr1 201046090 . G . PASS END=201046092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 201046093 . G . PASS END=201046095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:34,0 chr1 201046096 . C . PASS END=201046096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:34,0 chr1 201046097 . C . PASS END=201046228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,84,255:40,0 chr1 201046229 . A . PASS END=201046235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:25,0 chr1 201046236 . T . PASS END=201046236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:23,0 chr1 201046237 . G . PASS END=201046255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,862:0,61,255:25,0 chr1 201046997 . C . PASS END=201046997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 201047007 . T . PASS END=201047007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201047008 . T . PASS END=201047008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 201047009 . G . PASS END=201047022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:24:0,67,894:0,67,255:26,0 chr1 201047023 . T . PASS END=201047024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201047025 . C . PASS END=201047061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:36,0 chr1 201047062 . G A, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.026;ReadPosRankSum=3.335;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,23,0:0.622,0.000:37:2,11,0:12,12,0:46:85,0,45,794,496,1290:255,0,255:13,0:5.0000e+01,1.0665e-04,4.8369e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,15,8:6,8,11,12 chr1 201047063 . G . PASS END=201047074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1349:0,98,255:37,0 chr1 201047075 . A G, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,14,0:0,23,0:108:196,111,0,1435,111,1435:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,15:0,0,19,18 chr1 201047076 . C . PASS END=201047110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1308:0,92,255:36,0 chr1 201047111 . A G, 47.20 PASS DP=39;MQ=249.28;MQRankSum=4.583;ReadPosRankSum=2.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,16,0:0.410,0.000:39:13,5,0:10,11,0:46:82,0,50,533,783,1316:255,0,255:21,0:4.7205e+01,1.0432e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,9,7:14,9,8,8 chr1 201047112 . C . PASS END=201047148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:38:0,101,1172:0,101,255:39,0 chr1 201047149 . T . PASS END=201047232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,101,1209:0,101,255:40,0 chr1 201052290 . C . PASS END=201052290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 201052291 . T . PASS END=201052296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201052297 . A . PASS END=201052297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,588:0,52,255:21,0 chr1 201052298 . C . PASS END=201052298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201052299 . G . PASS END=201052300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,747:0,49,255:21,0 chr1 201052301 . G . PASS END=201052304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 201052305 . G . PASS END=201052305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 201052306 . C . PASS END=201052309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:25,0 chr1 201052310 . A T, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=2.312;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,13,0:0.520,0.000:25:3,8,0:9,5,0:47:85,0,47,185,185,185:255,0,255:12,0:5.0000e+01,8.7754e-05,4.9911e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,6,9,4:9,3,8,5:201052310 chr1 201052311 . G . PASS END=201052311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr1 201052312 . A C, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=2.312;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,13,0:0.520,0.000:25:3,8,0:9,5,0:47:85,0,47,185,185,185:255,0,180:11,0:5.0000e+01,8.7754e-05,4.9911e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,6,9,4:9,3,8,5:201052310 chr1 201052313 . G . PASS END=201052315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,901:0,78,255:26,0 chr1 201052316 . T . PASS END=201052329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:35,0 chr1 201052330 . T . PASS END=201052330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1229:0,77,255:35,0 chr1 201052331 . G . PASS END=201052353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,104,1351:0,104,255:40,0 chr1 201052354 . G . PASS END=201052436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,99,1344:0,100,255:40,0 chr1 201052437 . G . PASS END=201052444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,98,255:32,0 chr1 201052445 . T . PASS END=201052445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1068:0,68,255:31,0 chr1 201052446 . G . PASS END=201052450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr1 201054078 . A . PASS END=201054152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1147:0,80,255:38,0 chr1 201054153 . A . PASS END=201054153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 201054154 . G . PASS END=201054159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 201054564 . C . PASS END=201054565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 201054566 . T . PASS END=201054584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr1 201054585 . C . PASS END=201054589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201054590 . A . PASS END=201054709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1255:0,89,255:40,0 chr1 201056954 . C . PASS END=201056955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1119:0,82,255:32,0 chr1 201056956 . A . PASS END=201056956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1188:0,53,255:33,0 chr1 201056957 . C . PASS END=201056959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1286:0,64,255:38,0 chr1 201056960 . A . PASS END=201057057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,105,1421:0,105,255:40,0 chr1 201058386 . C . PASS END=201058396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 201058397 . C . PASS END=201058397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,731:0,30,255:21,0 chr1 201058398 . G . PASS END=201058407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr1 201058408 . C . PASS END=201058408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 201058409 . C . PASS END=201058416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 201058417 . G . PASS END=201058417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 201058418 . T . PASS END=201058418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,756:0,33,255:25,0 chr1 201058419 . A . PASS END=201058420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr1 201058421 . T . PASS END=201058421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr1 201058422 . G . PASS END=201058433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:29:0,87,1019:0,87,255:36,0 chr1 201058434 . G . PASS END=201058434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:33,0 chr1 201058435 . G . PASS END=201058465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:36:0,80,1269:0,80,255:39,0 chr1 201058466 . G . PASS END=201058466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 201058467 . G . PASS END=201058540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1233:0,86,255:39,0 chr1 201058541 . C . PASS END=201058557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:25,0 chr1 201058558 . G . PASS END=201058591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,629:0,51,255:19,0 chr1 201058596 . A . PASS END=201058596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 201060768 . C . PASS END=201060827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,136,255:40,0 chr1 201060828 . T . PASS END=201060864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,162,255:40,0 chr1 201060865 . G A, 48.29 PASS DP=63;MQ=250.00;MQRankSum=6.743;ReadPosRankSum=4.188;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,27,0:0.429,0.000:63:16,14,0:20,13,0:47:83,0,50,966,1258,2224:255,0,255:30,0:4.8288e+01,8.6201e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,19,14,13:21,15,13,14 chr1 201060866 . A . PASS END=201060902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:44:0,111,1665:0,119,255:40,0 chr1 201060903 . T . PASS END=201060920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:36:0,90,1350:0,108,255:38,0 chr1 201061097 . C . PASS END=201061097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201061100 . T . PASS END=201061114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 201061115 . C . PASS END=201061116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 201061117 . A . PASS END=201061225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1125:0,82,255:40,0 chr1 201061226 . G . PASS END=201061226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201061227 . A . PASS END=201061227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,923:0,57,255:25,0 chr1 201061228 . A . PASS END=201061228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201061229 . T . PASS END=201061242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 201061245 . A . PASS END=201061245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 201063007 . C . PASS END=201063007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 201063010 . C . PASS END=201063010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201063011 . C . PASS END=201063011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201063012 . C . PASS END=201063012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 201063013 . A . PASS END=201063014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201063015 . G . PASS END=201063015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 201063016 . A . PASS END=201063016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201063017 . A . PASS END=201063017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 201063018 . G . PASS END=201063038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,61,255:25,0 chr1 201063039 . A . PASS END=201063044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr1 201063045 . G . PASS END=201063045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 201063046 . C . PASS END=201063121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:27:0,80,994:0,80,255:33,0 chr1 201063122 . C . PASS END=201063144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,776:0,63,255:26,0 chr1 201063145 . T . PASS END=201063149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201079292 . C . PASS END=201079294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201079295 . G . PASS END=201079295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 201079296 . C . PASS END=201079304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:31,0 chr1 201079305 . A . PASS END=201079305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 201079306 . G . PASS END=201079308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 201079309 . A . PASS END=201079309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,960:0,76,255:29,0 chr1 201079310 . G . PASS END=201079397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:31:0,90,1202:0,93,255:40,0 chr1 201079405 . C . PASS END=201079405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 201081302 . G . PASS END=201081302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 201081316 . T . PASS END=201081317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 201081318 . C . PASS END=201081318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 201081319 . C . PASS END=201081319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 201081320 . A . PASS END=201081320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 201081321 . T . PASS END=201081321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 201081322 . T . PASS END=201081323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,759:0,50,255:22,0 chr1 201081324 . T . PASS END=201081324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:21,0 chr1 201081325 . A . PASS END=201081328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 201081329 . T . PASS END=201081329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 201081330 . G . PASS END=201081331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201081332 . T . PASS END=201081332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr1 201081333 . G . PASS END=201081342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 201081343 . T . PASS END=201081361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1000:0,81,255:33,0 chr1 201081362 . G . PASS END=201081362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:31,0 chr1 201081363 . G . PASS END=201081375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1218:0,86,255:36,0 chr1 201081376 . A . PASS END=201081376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr1 201081377 . A . PASS END=201081441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1288:0,92,255:37,0 chr1 201081442 . T . PASS END=201081442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:27,0 chr1 201081443 . C . PASS END=201081446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 201081447 . C . PASS END=201081467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,65,255:26,0 chr1 201081471 . T . PASS END=201081471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201081614 . G . PASS END=201081614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 201081673 . G . PASS END=201081673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 201083880 . T . PASS END=201083883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 201083884 . T . PASS END=201083884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 201083885 . G . PASS END=201083888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 201083889 . G . PASS END=201083889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 201083890 . G . PASS END=201083890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 201083891 . A . PASS END=201083891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 201083892 . T . PASS END=201083902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:11,0 chr1 201083903 . C . LowGQ END=201083903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:8,0 chr1 201083904 . C . PASS END=201083909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 201083910 . A . PASS END=201083910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:9,0 chr1 201083911 . G . PASS END=201083911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 201083912 . G . PASS END=201083912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201083913 . C . PASS END=201083926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 201083927 . A . PASS END=201083927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 201083928 . G . PASS END=201083941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 201083942 . A . PASS END=201083944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201083945 . C . PASS END=201083945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:8,0 chr1 201083946 . C . PASS END=201083947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 201083948 . G . PASS END=201083948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr1 201083949 . C . PASS END=201083964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:8,0 chr1 201083965 . G . PASS END=201083970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 201083971 . G . PASS END=201083971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 201083972 . C . PASS END=201083975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 201083976 . G . PASS END=201083980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 201083981 . C . PASS END=201083987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201083988 . G . PASS END=201083990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 201083991 . G . PASS END=201083991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201083992 . T . PASS END=201083994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 201083995 . G . PASS END=201084000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 201084001 . G . PASS END=201084001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 201084002 . G . PASS END=201084006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 201084007 . G . PASS END=201084007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 201084008 . C . PASS END=201084010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 201084011 . G . PASS END=201084011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 201084012 . C . PASS END=201084013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 201084014 . G . PASS END=201084021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 201084022 . C . PASS END=201084023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 201084024 . G . PASS END=201084028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 201084029 . C T, 0.01 DRAGENSnpHardQUAL DP=11;MQ=250.00;MQRankSum=1.423;ReadPosRankSum=1.423;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:6,1,0:4,0,0:29:6,0,50,36,358,393:6,0,255:9,0:5.3324e-03,2.9112e+01,8.2112e+01,6.4873e+01,4.2142e+02,4.2540e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,1,0:7,3,1,0 chr1 201084030 . G . PASS END=201084031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 201084032 . T . PASS END=201084032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 201084033 . G . PASS END=201084050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:17,0 chr1 201084051 . A . PASS END=201084051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 201084052 . G . PASS END=201084052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 201084053 . C . PASS END=201084053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 201084054 . G . PASS END=201084063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,637:0,41,255:19,0 chr1 201084064 . G . PASS END=201084078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 201084079 . G . PASS END=201084124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:21:0,61,740:0,61,255:25,0 chr1 201084125 . G . PASS END=201084125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr1 201084126 . C . PASS END=201084149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,812:0,64,255:26,0 chr1 201084150 . C . PASS END=201084150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 201084151 . T . PASS END=201084151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 201084152 . T . PASS END=201084152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 201084153 . C . PASS END=201084155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 201084156 . A . PASS END=201084157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:23,0 chr1 201084158 . C . PASS END=201084160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 201084161 . G . PASS END=201084161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 201084162 . G . PASS END=201084162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:21,0 chr1 201084163 . G . PASS END=201084164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 201084165 . G . PASS END=201084169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:24:0,42,809:0,42,255:22,0 chr1 201084170 . G . PASS END=201084172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 201084173 . G . PASS END=201084173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 201084174 . G . PASS END=201084186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 201084187 . C . PASS END=201084187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 201084188 . G . PASS END=201084200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 201084201 . G . PASS END=201084201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 201084202 . T . PASS END=201084205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 201084206 . C . PASS END=201084207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201084208 . C . PASS END=201084212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 201084213 . G . PASS END=201084213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 201084214 . A . PASS END=201084221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201084222 . C . PASS END=201084222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 201084223 . C . PASS END=201084225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 201084226 . T . PASS END=201084226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:19,0 chr1 201084227 . C . PASS END=201084234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 201084235 . T . PASS END=201084236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 201084237 . G . PASS END=201084241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 201084242 . T . PASS END=201084242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr1 201084243 . C . PASS END=201084266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,840:0,62,255:24,0 chr1 201084267 . G . PASS END=201084267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 201084268 . T . PASS END=201084268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 201084269 . A . PASS END=201084269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 201084270 . T . PASS END=201084273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 201084274 . T . PASS END=201084274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 201084275 . A . PASS END=201084278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 201084279 . C . PASS END=201084279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 201084280 . C . PASS END=201084289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:23,0 chr1 201084290 . C . PASS END=201084290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:21,0 chr1 201084291 . G . PASS END=201084294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 201084295 . A . PASS END=201084295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 201084296 . A . PASS END=201084297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201084298 . G . PASS END=201084298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 201084299 . G . PASS END=201084305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 201084306 . G . PASS END=201084306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 201084307 . G . PASS END=201084313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 201084314 . C . PASS END=201084315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201084316 . C . PASS END=201084316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 201084317 . C . PASS END=201084318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 201084319 . G . PASS END=201084319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 201084320 . C . PASS END=201084322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201084323 . A . PASS END=201084323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 201084324 . G . PASS END=201084325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 201084326 . C . PASS END=201084326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:26,0 chr1 201084327 . G . PASS END=201084329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 201084330 . G . PASS END=201084330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:27,0 chr1 201084331 . T . PASS END=201084335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:29,0 chr1 201084336 . G . PASS END=201084336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 201084337 . G . PASS END=201084338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201084339 . C . PASS END=201084339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:25,0 chr1 201084340 . G . PASS END=201084340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201084341 . G . PASS END=201084342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1002:0,60,255:27,0 chr1 201084343 . T . PASS END=201084346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 201084347 . C . PASS END=201084353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:29:0,62,934:0,62,255:24,0 chr1 201084354 . C . PASS END=201084354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,958:0,48,255:20,0 chr1 201084355 . G . PASS END=201084357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:29:0,63,945:0,70,255:20,0 chr1 201084358 . T . PASS END=201084358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:19,0 chr1 201084359 . A . PASS END=201084363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:23,0 chr1 201084364 . A . PASS END=201084364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 201084365 . G . PASS END=201084370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201084371 . G . PASS END=201084371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,766:0,25,255:22,0 chr1 201084372 . C . PASS END=201084372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 201084373 . A . PASS END=201084374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:23,0 chr1 201084375 . G . PASS END=201084377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,833:0,72,255:24,0 chr1 201084378 . G . PASS END=201084378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 201084379 . C . PASS END=201084381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201084382 . A . PASS END=201084382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:20,0 chr1 201084383 . G . PASS END=201084385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 201084386 . G . PASS END=201084386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 201084387 . C . PASS END=201084387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:19,0 chr1 201084388 . T . PASS END=201084389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr1 201084390 . G . PASS END=201084391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201084392 . C . PASS END=201084392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:20,0 chr1 201084393 . G . PASS END=201084397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:24,0 chr1 201084398 . G . PASS END=201084398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 201084399 . C . PASS END=201084399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr1 201084400 . A . PASS END=201084400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:23,0 chr1 201084401 . G . PASS END=201084401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 201084402 . G . PASS END=201084402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 201084403 . G . PASS END=201084403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 201084404 . G . PASS END=201084405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 201084406 . G . PASS END=201084406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:23,0 chr1 201084407 . C . PASS END=201084407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 201084408 . C . PASS END=201084408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 201084409 . T . PASS END=201084409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,776:0,33,255:23,0 chr1 201084410 . G . PASS END=201084419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:26,0 chr1 201084420 . G . PASS END=201084421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201084422 . G . PASS END=201084423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1008:0,71,255:28,0 chr1 201084424 . A . PASS END=201084426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 201084427 . A . PASS END=201084427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201084428 . C . PASS END=201084428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1014:0,35,255:24,0 chr1 201084429 . G . PASS END=201084442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,872:0,64,255:26,0 chr1 201084443 . A . PASS END=201084466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,50,255:19,0 chr1 201084467 . G . PASS END=201084467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,593:0,21,255:14,0 chr1 201084468 . G . PASS END=201084471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:15,0 chr1 201084472 . A . PASS END=201084473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 201084474 . C . PASS END=201084489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 201084490 . T . PASS END=201084490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:13,0 chr1 201084491 . T . PASS END=201084491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:13,0 chr1 201084492 . A . PASS END=201084492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 201084493 . T . PASS END=201084493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 201084494 . T . PASS END=201084494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr1 201084495 . G . PASS END=201084496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 201084497 . T . PASS END=201084497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,474:0,14,255:14,0 chr1 201084498 . C . PASS END=201084499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 201084500 . T . PASS END=201084500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 201104791 . C . PASS END=201104831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1150:0,85,255:34,0 chr1 201104832 . G . PASS END=201104832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 201104833 . C . PASS END=201104837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1244:0,105,255:35,0 chr1 201104838 . G . PASS END=201104838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1214:0,72,255:33,0 chr1 201104839 . C . PASS END=201104873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1290:0,94,255:36,0 chr1 201104874 . C . PASS END=201104898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:23:0,60,868:0,69,255:23,0 chr1 201104899 . G . PASS END=201104907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 201104908 . G . PASS END=201104908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,629:0,30,255:15,0 chr1 201104909 . A . PASS END=201104912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,46,255:15,0 chr1 201104913 . A . PASS END=201104919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,499:0,34,255:13,0 chr1 201104920 . A . PASS END=201104921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:12:15:0,12,410:0,12,255:13,0 chr1 201104922 . C . PASS END=201104923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 201104924 . G . PASS END=201104925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,457:0,25,255:12,0 chr1 201104926 . T . PASS END=201104926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,394:0,9,255:11,0 chr1 201104927 . G . PASS END=201104927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 201104928 . C . PASS END=201104928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr1 201104929 . C . PASS END=201104930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 201104931 . T . PASS END=201104931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,372:0,9,255:9,0 chr1 201104932 . A . PASS END=201104932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 201104933 . G . PASS END=201104933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:10,0 chr1 201104934 . A . PASS END=201104934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,413:0,3,255:9,0 chr1 201104935 . G . PASS END=201104935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 201104936 . C . PASS END=201104943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:9,0 chr1 201112948 . C . PASS END=201112954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1067:0,85,255:34,0 chr1 201112955 . T . PASS END=201112955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr1 201112956 . C . PASS END=201113079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1169:0,80,255:40,1 chr1 201115868 . C . PASS END=201115872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,677:0,60,255:23,0 chr1 201115873 . T . PASS END=201115873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 201115874 . G . PASS END=201115880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:24,0 chr1 201115881 . G . PASS END=201115886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 201115887 . C . PASS END=201115943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,901:0,65,255:26,0 chr1 201115944 . A . PASS END=201115949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 201115950 . A . PASS END=201115962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 201115963 . C . PASS END=201115963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 201115964 . G . PASS END=201115968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 201115969 . G . PASS END=201115980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,32,255:13,0 chr1 201115981 . A . PASS END=201115981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 201115982 . A . PASS END=201115985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 201115986 . A . PASS END=201115986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 201115987 . G C, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.843;ReadPosRankSum=1.378;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,6,0:0.500,0.000:12:3,4,0:3,2,0:48:85,0,50,207,206,413:188,0,188:4,0:5.0000e+01,6.5233e-05,5.3000e+01,2.0656e+02,2.4107e+02,4.1586e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,1,5:5,1,3,3 chr1 201115988 . A . PASS END=201115992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 201115993 . C . PASS END=201115995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:10:0,18,270:0,30,255:6,0 chr1 201115996 . G . PASS END=201115996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr1 201115997 . G . PASS END=201115997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:6,0 chr1 201120889 . C . PASS END=201120980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,143,255:40,0 chr1 201122911 . C . PASS END=201122946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1063:0,84,255:40,0 chr1 201122947 . T G, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,23,0:0,18,0:120:208,123,0,1590,123,1590:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,14:0,0,15,26 chr1 201122948 . G . PASS END=201122984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,117,1592:0,118,255:40,0 chr1 201122985 . C . PASS END=201123051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:40:0,87,1415:0,87,255:40,0 chr1 201162422 . A . PASS END=201162428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1620:0,111,255:37,0 chr1 201163282 . G . PASS END=201163399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1202:0,82,255:40,0 chr1 201163400 . G . PASS END=201163401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 201164967 . G . PASS END=201164967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201164968 . G . PASS END=201164994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,979:0,84,255:39,0 chr1 201164995 . C . PASS END=201164995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 201164996 . T . PASS END=201165106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:33:0,85,1127:0,85,255:40,0 chr1 201166346 . A . PASS END=201166360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 201166361 . G . PASS END=201166382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1066:0,87,255:34,0 chr1 201166383 . G A, 46.90 PASS DP=37;MQ=250.00;MQRankSum=5.089;ReadPosRankSum=1.500;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,15,0:0.405,0.000:37:10,7,0:12,8,0:46:82,0,50,500,779,1278:255,0,255:19,0:4.6905e+01,1.1028e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,6,9:10,12,8,7 chr1 201166384 . C . PASS END=201166430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,86,255:35,0 chr1 201166431 . T . PASS END=201166431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 201166432 . C . PASS END=201166433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201166434 . C . PASS END=201166434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201166435 . T C, 140.30 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,12,0:0,19,0:90:178,93,0,1199,93,1199:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,18:0,0,16,15 chr1 201166436 . G . PASS END=201166436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201166437 . T . PASS END=201166437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:26,0 chr1 201166438 . C . PASS END=201166445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201168462 . T . PASS END=201168506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,153,255:40,0 chr1 201168737 . A . PASS END=201168782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,124,255:40,0 chr1 201169365 . G . PASS END=201169369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 201169370 . C . PASS END=201169370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr1 201169371 . A . PASS END=201169376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 201169377 . C . PASS END=201169377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 201169378 . C . PASS END=201169382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:29,0 chr1 201169383 . G . PASS END=201169383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 201169384 . A . PASS END=201169384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,905:0,56,255:28,0 chr1 201169385 . A . PASS END=201169385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1092:0,87,255:29,0 chr1 201169386 . A . PASS END=201169386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 201169387 . A . PASS END=201169388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,959:0,87,255:29,0 chr1 201169389 . G . PASS END=201169389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 201169390 . A . PASS END=201169390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,926:0,59,255:29,0 chr1 201169391 . T . PASS END=201169391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr1 201169392 . G . PASS END=201169392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:28,0 chr1 201169393 . G . PASS END=201169397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1147:0,90,255:33,0 chr1 201169398 . T . PASS END=201169398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:32,0 chr1 201169399 . G . PASS END=201169494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1186:0,81,255:40,0 chr1 201169495 . A . PASS END=201169495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:31,0 chr1 201169496 . G . PASS END=201169518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:31,0 chr1 201169519 . C . PASS END=201169519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:26,0 chr1 201169520 . A . PASS END=201169521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:26,0 chr1 201169522 . G . PASS END=201169533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 201169534 . G . PASS END=201169539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:21:0,57,855:0,59,255:20,0 chr1 201170847 . T . PASS END=201170861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,170,255:40,0 chr1 201170862 . T . PASS END=201170960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:91:63:0,91,1800:0,91,255:40,0 chr1 201172866 . G . PASS END=201172874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1197:0,83,255:35,0 chr1 201172875 . A . PASS END=201172875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1152:0,77,255:34,0 chr1 201172876 . T . PASS END=201173010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:35:0,92,1318:0,92,255:40,0 chr1 201173011 . T . PASS END=201173011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1209:0,74,255:30,0 chr1 201173012 . C . PASS END=201173034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:31,0 chr1 201174210 . C . PASS END=201174235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr1 201174236 . C . PASS END=201174241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 201174242 . G . PASS END=201174244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 201174245 . A . PASS END=201174245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 201174246 . C . PASS END=201174272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:16,0 chr1 201174273 . T . PASS END=201174273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:15,0 chr1 201174274 . C . PASS END=201174283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 201174284 . A . PASS END=201174287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 201174288 . T . PASS END=201174302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:19,0 chr1 201174303 . C . PASS END=201174317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201174318 . A . PASS END=201174324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 201174325 . G . PASS END=201174325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr1 201174326 . C . PASS END=201174326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201174327 . A . PASS END=201174374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:26,0 chr1 201174375 . A . PASS END=201174375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 201174376 . C . PASS END=201174379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201174380 . C . PASS END=201174388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 201174389 . C . PASS END=201174396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 201174397 . G . PASS END=201174402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201174403 . G . PASS END=201174403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 201174404 . G . PASS END=201174411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 201174412 . T . PASS END=201174439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:24:0,63,945:0,65,255:26,0 chr1 201174440 . G . PASS END=201174482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,551:0,45,255:19,0 chr1 201175211 . C . PASS END=201175213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 201175214 . G . PASS END=201175214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 201175215 . G . PASS END=201175226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,605:0,51,255:19,0 chr1 201175227 . C A, 103.72 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,10,0:0,9,0:54:141,57,0,699,57,699:255,57,0:0,0:1.0372e+02,5.3717e+01,1.8379e-05,4.5000e+02,8.8487e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,9:0,0,9,10 chr1 201175228 . C . PASS END=201175232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 201175233 . G . PASS END=201175247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 201175248 . C . PASS END=201175253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201175254 . A . PASS END=201175254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:4:20:0,4,479:0,4,255:17,0 chr1 201175255 . C . PASS END=201175259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 201175260 . G . PASS END=201175260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 201175261 . A . PASS END=201175261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 201175262 . G . PASS END=201175268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 201175269 . A . PASS END=201175269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 201175270 . G . PASS END=201175273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,930:0,72,255:24,0 chr1 201175274 . A G, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=3.129;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:5,8,0:6,5,0:48:85,0,50,465,393,858:255,0,255:10,0:5.0000e+01,6.7045e-05,5.2640e+01,4.5000e+02,4.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,7,6:6,5,8,5 chr1 201175275 . G . PASS END=201175288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 201175289 . A . PASS END=201175296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:19,0 chr1 201175297 . G . PASS END=201175297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:18,0 chr1 201175298 . G . PASS END=201175311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,690:0,57,255:19,0 chr1 201175312 . C . PASS END=201175318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 201175319 . A . PASS END=201175319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,627:0,18,255:17,0 chr1 201175320 . G . PASS END=201175331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:18,0 chr1 201175332 . G . PASS END=201175349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:13,0 chr1 201175350 . C . PASS END=201175362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 201175363 . G . PASS END=201175363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 201175364 . C . PASS END=201175369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr1 201175370 . C . PASS END=201175400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr1 201175401 . A . PASS END=201175406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 201175407 . G . PASS END=201175415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 201175416 . T . PASS END=201175427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 201175428 . C . PASS END=201175478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,372:0,30,255:13,0 chr1 201175479 . A . PASS END=201175479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 201175480 . C . PASS END=201175508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr1 201175509 . G . PASS END=201175509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 201175510 . G . PASS END=201175546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr1 201175547 . A . PASS END=201175547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:16,0 chr1 201175548 . C . PASS END=201175564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,675:0,44,255:18,0 chr1 201175565 . C . PASS END=201175565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:17,0 chr1 201175566 . C . PASS END=201175566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201175567 . A . PASS END=201175567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 201175568 . G . PASS END=201175568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 201175569 . A . PASS END=201175569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr1 201175570 . A . PASS END=201175570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:19,0 chr1 201175571 . G . PASS END=201175573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 201175574 . T . PASS END=201175574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 201175575 . T . PASS END=201175587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:26,0 chr1 201175588 . C . PASS END=201175588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 201175589 . A . PASS END=201175589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 201175590 . T . PASS END=201175602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1012:0,84,255:31,0 chr1 201175603 . A . PASS END=201175603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,993:0,76,255:30,0 chr1 201175604 . G . PASS END=201175607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 201175608 . A . PASS END=201175608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 201175609 . G . PASS END=201175610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 201175611 . A . PASS END=201175612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 201175613 . C . PASS END=201175613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 201175614 . A . PASS END=201175636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 201175637 . A . PASS END=201175637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr1 201175638 . A . PASS END=201175647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:31,0 chr1 201175648 . C G, 48.35 PASS DP=33;MQ=249.06;MQRankSum=4.826;ReadPosRankSum=2.459;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,14,0:0.424,0.000:33:11,8,0:8,6,0:47:83,0,50,493,677,1170:255,0,255:17,0:4.8346e+01,8.5425e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,4,10:13,6,8,6 chr1 201175649 . G . PASS END=201175677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1111:0,82,255:34,0 chr1 201175678 . T . PASS END=201175678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1263:0,75,255:33,0 chr1 201175679 . G . PASS END=201175714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1247:0,86,255:34,0 chr1 201175715 . G T, 142.39 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,19,0:0,13,0:92:180,95,0,1174,95,1174:255,96,0:0,0:1.4239e+02,9.2393e+01,0.0000e+00,4.5000e+02,1.2716e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,17:0,0,20,12 chr1 201175716 . G . PASS END=201175749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1233:0,89,255:34,0 chr1 201175750 . G . PASS END=201175750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr1 201175751 . G . PASS END=201175752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 201175753 . A . PASS END=201175903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1108:0,85,255:34,0 chr1 201175904 . A . PASS END=201175941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,900:0,61,255:26,0 chr1 201175942 . G . PASS END=201175942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201175943 . G . PASS END=201175948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1016:0,71,255:26,0 chr1 201175949 . C . PASS END=201175961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr1 201175962 . A . PASS END=201175962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,899:0,64,255:26,0 chr1 201175963 . A . PASS END=201175969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr1 201175970 . G . PASS END=201175972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201175973 . G . PASS END=201175980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 201175981 . G . PASS END=201175998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1172:0,83,255:31,0 chr1 201175999 . G . PASS END=201175999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 201176000 . G . PASS END=201176006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:28,0 chr1 201176007 . A . PASS END=201176008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 201176009 . A . PASS END=201176017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:28,0 chr1 201176018 . A G, 142.39 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,16,0:0,16,0:92:180,95,0,1182,95,1182:255,96,0:0,0:1.4239e+02,9.2391e+01,0.0000e+00,4.5000e+02,1.2716e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,16:0,0,16,16 chr1 201176019 . C . PASS END=201176021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 201176022 . C . PASS END=201176022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr1 201176023 . A . PASS END=201176029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 201176030 . C . PASS END=201176031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 201176032 . G . PASS END=201176038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr1 201176039 . C . PASS END=201176039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 201176040 . T . PASS END=201176040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201176041 . G . PASS END=201176055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:27:0,74,1108:0,74,255:26,0 chr1 201176056 . A . PASS END=201176063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:25,0 chr1 201176064 . A . PASS END=201176064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 201176065 . A . PASS END=201176084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,892:0,61,255:25,0 chr1 201176085 . G . PASS END=201176099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 201176100 . A . PASS END=201176112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 201176113 . C . PASS END=201176116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr1 201176117 . G . PASS END=201176118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 201176119 . G . PASS END=201176119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 201176120 . G . PASS END=201176129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:22,0 chr1 201176130 . T . PASS END=201176130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201176131 . G . PASS END=201176156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 201176157 . G . PASS END=201176158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201176159 . G . PASS END=201176159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 201176160 . G . PASS END=201176176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:30:0,86,1064:0,86,255:34,0 chr1 201176177 . A . PASS END=201176177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:32,0 chr1 201176178 . A . PASS END=201176288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1229:0,96,255:39,0 chr1 201176289 . A . PASS END=201176289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 201176290 . G . PASS END=201176290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201176291 . A . PASS END=201176305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,74,255:26,0 chr1 201176306 . G . PASS END=201176309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 201176310 . G . PASS END=201176314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 201176315 . T . PASS END=201176326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 201176327 . G . PASS END=201176366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:24,0 chr1 201176367 . A . PASS END=201176367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 201176368 . G . PASS END=201176378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 201176379 . T . PASS END=201176380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201176381 . T . PASS END=201176384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 201176385 . A . PASS END=201176385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 201176386 . C . PASS END=201176386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201176387 . A . PASS END=201176387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 201176388 . G . PASS END=201176406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 201176407 . G . PASS END=201176423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:20:0,46,698:0,46,255:19,0 chr1 201176424 . G . PASS END=201176433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 201176434 . G . PASS END=201176474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr1 201176475 . C . PASS END=201176475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201176476 . T . PASS END=201176491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 201176492 . G . PASS END=201176495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 201176496 . A . PASS END=201176496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 201176497 . G . PASS END=201176505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:22,0 chr1 201176506 . A . PASS END=201176506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 201176507 . T . PASS END=201176513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr1 201176514 . A . PASS END=201176514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 201176515 . A . PASS END=201176516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201176517 . A . PASS END=201176517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 201176518 . G . PASS END=201176540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 201176541 . G . PASS END=201176541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 201176542 . G . PASS END=201176547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 201176548 . A . PASS END=201176548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 201176549 . C . PASS END=201176551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 201176552 . C . PASS END=201176552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 201176553 . A . PASS END=201176582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 201176583 . T . PASS END=201176583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:17,0 chr1 201176584 . G . PASS END=201176584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201176585 . G . PASS END=201176602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,611:0,60,255:20,0 chr1 201176603 . C . PASS END=201176605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201176606 . G . PASS END=201176607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201176608 . G . PASS END=201176627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,674:0,44,255:19,0 chr1 201176628 . T . LowGQ END=201176628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:4,0,255:14,0 chr1 201176629 . G . PASS END=201176642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:16,0 chr1 201176643 . T . PASS END=201176643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201176644 . G . PASS END=201176687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 201176688 . G . PASS END=201176688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201176689 . C . PASS END=201176689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201176690 . T . PASS END=201176693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 201176694 . T . PASS END=201176700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201176701 . C . PASS END=201176701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201176702 . C . PASS END=201176709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 201176710 . G . PASS END=201176712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 201176713 . G . PASS END=201176713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 201176714 . C . PASS END=201176731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr1 201176732 . C . PASS END=201176736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 201176737 . G . PASS END=201176737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 201176738 . G . PASS END=201176750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 201176751 . A . PASS END=201176753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201176754 . A . PASS END=201176756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201176757 . A . PASS END=201176758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 201176759 . G . PASS END=201176868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1202:0,84,255:38,0 chr1 201176869 . A . PASS END=201176869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:29,0 chr1 201176870 . G . PASS END=201176878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 201176879 . C . PASS END=201176879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:27,0 chr1 201176880 . T . PASS END=201176884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 201176885 . A . PASS END=201176885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 201176886 . C . PASS END=201176886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 201176887 . G . PASS END=201176887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:28,0 chr1 201176888 . A . PASS END=201176897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1064:0,80,255:30,0 chr1 201176898 . A . PASS END=201176898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:27,0 chr1 201176899 . G . PASS END=201176902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1125:0,82,255:30,0 chr1 201176903 . A . PASS END=201176903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr1 201176904 . T . PASS END=201176906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:29,0 chr1 201176907 . T . PASS END=201176908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1072:0,76,255:26,0 chr1 201176909 . G . PASS END=201176910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201176911 . G . PASS END=201176911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:26,0 chr1 201176912 . A . PASS END=201176919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:29,0 chr1 201176920 . T . PASS END=201176920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,956:0,40,255:27,0 chr1 201176921 . C . PASS END=201176921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:28,0 chr1 201176922 . T . PASS END=201176922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:27,0 chr1 201176923 . A . PASS END=201176925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 201176926 . A . PASS END=201176926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:29,0 chr1 201176927 . G . PASS END=201176927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 201176928 . C . PASS END=201176928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 201176929 . G . PASS END=201176930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1021:0,90,255:30,0 chr1 201176931 . G . PASS END=201176934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 201176935 . G . PASS END=201176943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1258:0,91,255:33,0 chr1 201176944 . T . PASS END=201176944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:32,0 chr1 201176945 . A . PASS END=201176948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:34,0 chr1 201176949 . C . PASS END=201176949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:33,0 chr1 201176950 . T . PASS END=201176951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 201176952 . A . PASS END=201176952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:33,0 chr1 201176953 . G . PASS END=201176963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1217:0,89,255:35,0 chr1 201176964 . A . PASS END=201176964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1169:0,58,255:33,0 chr1 201176965 . G . PASS END=201176967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:34,0 chr1 201176968 . A . PASS END=201176968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1133:0,50,255:32,0 chr1 201176969 . T . PASS END=201176986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1123:0,85,255:35,0 chr1 201176987 . C . PASS END=201176987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1105:0,58,255:32,0 chr1 201176988 . T . PASS END=201177006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1164:0,85,255:33,0 chr1 201177007 . A . PASS END=201177007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:31,0 chr1 201177008 . G . PASS END=201177022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:34,0 chr1 201177023 . T . PASS END=201177029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:31:0,60,980:0,60,255:26,0 chr1 201177030 . T . PASS END=201177030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201177031 . G . PASS END=201177032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1005:0,60,255:28,0 chr1 201177033 . G . PASS END=201177033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201177034 . G . PASS END=201177034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,914:0,40,255:25,0 chr1 201177035 . A . PASS END=201177035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201177036 . A . PASS END=201177036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,812:0,53,255:24,0 chr1 201177037 . G . PASS END=201177042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:26,0 chr1 201177043 . G . PASS END=201177043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201177044 . G . PASS END=201177044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 201177045 . G . PASS END=201177045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201177046 . T . PASS END=201177046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,872:0,54,255:25,0 chr1 201177047 . A . PASS END=201177048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201177049 . A . PASS END=201177049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 201177050 . G . PASS END=201177051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201177052 . C . PASS END=201177061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 201177062 . G . PASS END=201177062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:22,0 chr1 201177063 . A . PASS END=201177064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:21,0 chr1 201177065 . C . PASS END=201177065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 201177066 . G . PASS END=201177074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 201177075 . A . PASS END=201177075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 201177076 . G . PASS END=201177083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,870:0,61,255:21,0 chr1 201177084 . T . PASS END=201177084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 201177085 . G . PASS END=201177085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 201177086 . G . PASS END=201177086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 201177087 . A . PASS END=201177089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201177090 . T . PASS END=201177090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 201177091 . G . PASS END=201177098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 201177099 . T . PASS END=201177099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 201177100 . G . PASS END=201177102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201177103 . C . PASS END=201177103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 201177104 . C . PASS END=201177125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:24,0 chr1 201177126 . A . PASS END=201177126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 201177127 . G . PASS END=201177186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:21:0,61,760:0,61,255:26,0 chr1 201177187 . A . PASS END=201177187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 201177188 . A . PASS END=201177233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,725:0,63,255:26,0 chr1 201177234 . C . PASS END=201177234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201177235 . C . PASS END=201177256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 201177257 . G . PASS END=201177315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1142:0,85,255:32,0 chr1 201177316 . A . PASS END=201177316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr1 201177317 . C . PASS END=201177347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:30,0 chr1 201177348 . A . PASS END=201177348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:27,0 chr1 201177349 . G . PASS END=201177349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201177350 . A . PASS END=201177377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,881:0,70,255:27,0 chr1 201177378 . T . PASS END=201177378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 201177379 . C . PASS END=201177394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,764:0,69,255:23,0 chr1 201177395 . G . PASS END=201177397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 201177398 . G . PASS END=201177399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201177400 . T . PASS END=201177435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:18,0 chr1 201177436 . G . PASS END=201177436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 201177437 . G . PASS END=201177438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 201177439 . G . PASS END=201177439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr1 201177440 . G . PASS END=201177451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 201177452 . G . PASS END=201177455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,701:0,24,255:19,0 chr1 201177456 . T . PASS END=201177474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,643:0,40,255:19,0 chr1 201177475 . G . PASS END=201177475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 201177476 . G . PASS END=201177476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 201177477 . A . PASS END=201177477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 201177478 . C . PASS END=201177478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 201177479 . C . PASS END=201177480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 201177481 . G . PASS END=201177495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,674:0,54,255:18,0 chr1 201177496 . G . PASS END=201177496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 201177497 . G . PASS END=201177513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,660:0,41,255:19,0 chr1 201177514 . G . PASS END=201177520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr1 201177521 . G . PASS END=201177521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,705:0,24,255:20,0 chr1 201177522 . G . PASS END=201177528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 201177529 . T . PASS END=201177529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 201177530 . G . PASS END=201177534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 201177535 . G . PASS END=201177535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 201177536 . G . PASS END=201177549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 201177550 . G . PASS END=201177551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 201177552 . A . PASS END=201177555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201177556 . G . PASS END=201177556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 201177557 . G . PASS END=201177560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:21,0 chr1 201177561 . T . PASS END=201177561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 201177562 . G . PASS END=201177563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201177564 . T . PASS END=201177564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 201177565 . T . PASS END=201177567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201177568 . A . PASS END=201177572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 201177573 . T . PASS END=201177573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,699:0,35,255:17,0 chr1 201177574 . G . PASS END=201177586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:18,0 chr1 201177587 . C . PASS END=201177587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 201177588 . T . PASS END=201177588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 201177589 . G . PASS END=201177589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 201177590 . A . PASS END=201177595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 201177596 . T . PASS END=201177600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201177601 . C . PASS END=201177601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201177602 . C . PASS END=201177602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 201177603 . T . PASS END=201177607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr1 201177608 . A . PASS END=201177608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 201177609 . T . PASS END=201177610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 201177611 . G . PASS END=201177611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 201177612 . G . PASS END=201177613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 201177614 . C . PASS END=201177614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 201177615 . C . PASS END=201177624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201177625 . A . PASS END=201177637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,490:0,31,255:12,0 chr1 201177638 . A . PASS END=201177638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 201177639 . T . PASS END=201177643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 201177644 . C . PASS END=201177649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 201177650 . A . PASS END=201177650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 201177651 . T . PASS END=201177651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201177652 . G . PASS END=201177751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:19,0 chr1 201177752 . C . PASS END=201177752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 201177753 . A . PASS END=201177753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201177754 . G . PASS END=201177777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,906:0,69,255:26,0 chr1 201177778 . A . PASS END=201177778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201177779 . G . PASS END=201177779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 201177780 . A . PASS END=201177781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201177782 . A . PASS END=201177782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,938:0,45,255:26,0 chr1 201177783 . T . PASS END=201177790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 201177791 . G . PASS END=201177802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 201177803 . G . PASS END=201177804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201177805 . A . PASS END=201177862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,68,255:26,0 chr1 201177863 . G . PASS END=201177863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 201177864 . G . PASS END=201177866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 201177867 . A . PASS END=201177867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 201177868 . G . PASS END=201177876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,831:0,62,255:25,0 chr1 201177877 . G . PASS END=201177878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 201177879 . A . PASS END=201177879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 201177880 . G . PASS END=201177882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 201177883 . T . PASS END=201177895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 201177896 . T . PASS END=201177896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:23,0 chr1 201177897 . G . PASS END=201177908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:24,0 chr1 201177909 . G . PASS END=201177909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:22,0 chr1 201177910 . A . PASS END=201177919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 201177920 . C . PASS END=201177920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 201177921 . G . PASS END=201177921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201177922 . G . PASS END=201177922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 201177923 . G . PASS END=201177925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 201177926 . G . PASS END=201177926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 201177927 . C . PASS END=201177930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr1 201177931 . G . PASS END=201177933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:25,0 chr1 201177934 . G . PASS END=201177934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:26,0 chr1 201177935 . A . PASS END=201177940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr1 201177941 . G . PASS END=201177941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201177942 . G . PASS END=201177944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201177945 . T . PASS END=201177946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 201177947 . G . PASS END=201177967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1295:0,95,255:38,0 chr1 201177968 . T C, 50.00 PASS DP=40;MQ=249.12;MQRankSum=5.396;ReadPosRankSum=3.151;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:14,9,0:6,11,0:48:85,0,50,650,699,1349:255,0,255:20,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,5,13,7:9,11,8,12 chr1 201177969 . G . PASS END=201178005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,101,1450:0,101,255:40,0 chr1 201178006 . G . PASS END=201178213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:38:0,87,1395:0,87,255:40,0 chr1 201178214 . G . PASS END=201178214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:34,0 chr1 201178215 . T . PASS END=201178215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1291:0,97,255:34,0 chr1 201178216 . C . PASS END=201178216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:34,0 chr1 201178217 . C . PASS END=201178217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:29,0 chr1 201178218 . T . PASS END=201178218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr1 201178219 . G . PASS END=201178221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:30,0 chr1 201178222 . G . PASS END=201178222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,117,255:29,0 chr1 201178223 . A . PASS END=201178224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr1 201178225 . A . PASS END=201178226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1164:0,53,255:27,0 chr1 201178227 . G . PASS END=201178227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:28,0 chr1 201178228 . G . PASS END=201178228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:27,0 chr1 201178229 . G . PASS END=201178229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:28,0 chr1 201178230 . G . PASS END=201178230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:27,0 chr1 201178231 . T . PASS END=201178234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,1105:0,60,255:26,0 chr1 201178235 . T . PASS END=201178235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1086:0,44,255:22,0 chr1 201178236 . G . PASS END=201178241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1035:0,60,255:25,0 chr1 201178242 . G . PASS END=201178243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr1 201178244 . C . PASS END=201178245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 201178246 . G . PASS END=201178246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 201178247 . G . PASS END=201178249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:29,0 chr1 201178250 . A . PASS END=201178251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 201178252 . A . PASS END=201178252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1086:0,44,255:28,0 chr1 201178253 . G . PASS END=201178254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1103:0,61,255:29,0 chr1 201178255 . A . PASS END=201178256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1031:0,41,255:29,0 chr1 201178257 . T . PASS END=201178277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1053:0,71,255:26,0 chr1 201178278 . A . PASS END=201178282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 201178283 . G . PASS END=201178283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201178284 . G . PASS END=201178284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201178285 . T . PASS END=201178287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 201178288 . G . PASS END=201178288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 201178289 . G . PASS END=201178291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:31,1 chr1 201178292 . A . PASS END=201178302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1233:0,86,255:31,0 chr1 201178303 . T . PASS END=201178303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:29,0 chr1 201178304 . T . PASS END=201178320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1194:0,83,255:37,0 chr1 201178321 . A . PASS END=201178321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1287:0,64,255:35,0 chr1 201178322 . T . PASS END=201178408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1374:0,81,255:40,0 chr1 201178409 . A . PASS END=201178409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1418:0,76,255:37,0 chr1 201178410 . T . PASS END=201178415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1391:0,84,255:38,0 chr1 201178416 . A . PASS END=201178416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1396:0,76,255:35,0 chr1 201178417 . G . PASS END=201178430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:39:0,87,1220:0,87,255:37,0 chr1 201178431 . G . PASS END=201178431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:33,0 chr1 201178432 . G . PASS END=201178439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1216:0,83,255:35,0 chr1 201178440 . G . PASS END=201178440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1205:0,78,255:34,0 chr1 201178441 . A . PASS END=201178448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,94,255:35,0 chr1 201178449 . A . PASS END=201178450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,81,255:26,0 chr1 201178451 . G . PASS END=201178455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,81,255:28,0 chr1 201178456 . A . PASS END=201178456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1132:0,66,255:26,0 chr1 201178457 . G . PASS END=201178457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1260:0,117,255:28,0 chr1 201178458 . G . PASS END=201178467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:25,0 chr1 201178468 . A . PASS END=201178468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,922:0,51,255:21,0 chr1 201178469 . G . PASS END=201178473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 201178474 . T . PASS END=201178474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:21,0 chr1 201178475 . C . PASS END=201178478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 201178479 . G . PASS END=201178479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 201178480 . G . PASS END=201178480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,684:0,25,255:18,0 chr1 201178481 . A . PASS END=201178481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 201178482 . A . PASS END=201178482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201178483 . A . PASS END=201178483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,584:0,19,255:18,0 chr1 201178484 . T . PASS END=201178484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:20,0 chr1 201178485 . G . PASS END=201178487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201178488 . G . PASS END=201178488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:19,0 chr1 201178489 . T . PASS END=201178492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201178493 . T . PASS END=201178493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:19,0 chr1 201178494 . T . PASS END=201178494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201178495 . G . PASS END=201178495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 201178496 . A . PASS END=201178496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,599:0,33,255:19,0 chr1 201178497 . G . PASS END=201178497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr1 201178498 . G . PASS END=201178499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 201178500 . A . PASS END=201178501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,701:0,49,255:19,0 chr1 201178502 . G . PASS END=201178502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:17,0 chr1 201178503 . C . LowGQ END=201178503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,555:0,0,255:15,0 chr1 201178504 . T . PASS END=201178504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:18,0 chr1 201178505 . A . PASS END=201178505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,602:0,13,255:16,0 chr1 201178506 . T . PASS END=201178506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:18,0 chr1 201178507 . A . PASS END=201178507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,621:0,16,255:17,0 chr1 201178508 . G . PASS END=201178511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,630:0,46,255:19,0 chr1 201178512 . A . LowGQ END=201178512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,454:4,0,255:14,0 chr1 201178513 . G . PASS END=201178513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,615:0,46,255:17,0 chr1 201178514 . A . LowGQ END=201178514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,505:9,0,255:15,0 chr1 201178515 . T . PASS END=201178515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 201178516 . T . PASS END=201178516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,554:0,29,255:16,0 chr1 201178517 . T . PASS END=201178517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,560:0,30,255:16,0 chr1 201178518 . G . PASS END=201178522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,684:0,46,255:18,0 chr1 201178523 . T . PASS END=201178524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr1 201178525 . T . PASS END=201178525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:1:19:0,1,484:0,1,255:16,0 chr1 201178526 . C . PASS END=201178526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,507:0,24,255:15,0 chr1 201178527 . T . PASS END=201178527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 201178528 . G . PASS END=201178528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,584:0,18,255:16,0 chr1 201178529 . A . LowGQ END=201178529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,490:7,0,255:14,0 chr1 201178530 . G . PASS END=201178530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:16,0 chr1 201178531 . G . PASS END=201178531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 201178532 . G . PASS END=201178532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,685:0,27,255:18,0 chr1 201178533 . A . LowGQ END=201178533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,393:40,0,255:15,0 chr1 201178534 . G . PASS END=201178535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:18,0 chr1 201178536 . G . PASS END=201178536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201178537 . G . PASS END=201178537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,569:0,32,255:19,0 chr1 201178538 . G . LowGQ END=201178539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,448:6,0,255:18,0 chr1 201178540 . T . PASS END=201178542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,540:0,10,255:19,0 chr1 201178543 . G . PASS END=201178546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,664:0,63,255:21,0 chr1 201178547 . G . PASS END=201178547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:19,0 chr1 201178548 . C . PASS END=201178548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:18,0 chr1 201178549 . A . PASS END=201178549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201178550 . A . PASS END=201178552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201178553 . C . PASS END=201178554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:17,0 chr1 201178555 . G . PASS END=201178568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 201178569 . C . PASS END=201178569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:20,0 chr1 201178570 . T . PASS END=201178570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 201178571 . T . PASS END=201178572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr1 201178573 . G . PASS END=201178576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 201178577 . C . PASS END=201178577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr1 201178578 . T . PASS END=201178590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,848:0,66,255:24,0 chr1 201178591 . T . PASS END=201178591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 201178592 . C . PASS END=201178617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,984:0,65,255:26,0 chr1 201178618 . G . PASS END=201178618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201178619 . A . PASS END=201178619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 201178620 . T . PASS END=201178640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1125:0,87,255:32,0 chr1 201178641 . A . PASS END=201178641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:29,0 chr1 201178642 . G . PASS END=201178644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 201178645 . T . PASS END=201178649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 201178650 . G . PASS END=201178650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:32,0 chr1 201178651 . A . PASS END=201178666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:33:0,88,1211:0,88,255:34,0 chr1 201178667 . C . PASS END=201178667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1172:0,28,255:31,0 chr1 201178668 . G . PASS END=201178679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:35:0,84,1260:0,105,255:36,0 chr1 201178680 . A . PASS END=201178680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:13:43:0,13,1352:0,13,255:33,0 chr1 201178681 . G . PASS END=201178704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:40:0,80,1454:0,80,255:40,0 chr1 201178705 . A . PASS END=201178705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:49:55:0,49,1740:0,49,255:40,0 chr1 201178706 . A . PASS END=201178707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 201178708 . A . PASS END=201178708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:46:54:0,46,1754:0,46,255:40,0 chr1 201178709 . A . PASS END=201178715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,159,255:40,0 chr1 201178716 . T . PASS END=201178750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,116,1800:0,116,255:40,0 chr1 201178751 . G . PASS END=201178757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr1 201178758 . G . LowGQ END=201178758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:0:63:0,0,1950:5,0,255:40,0 chr1 201178759 . A . PASS END=201178787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,125,255:40,0 chr1 201178788 . A . LowGQ END=201178788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,16:59:0:59:0,0,895:255,0,255:37,0 chr1 201178789 . G . PASS END=201178835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,126,255:40,0 chr1 201178836 . C . LowGQ END=201178836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,10:52:0:52:0,0,1218:141,0,255:40,0 chr1 201178837 . T . PASS END=201178843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,120,1800:0,133,255:40,0 chr1 201178844 . T . LowGQ END=201178844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,9:49:0:49:0,0,1168:149,0,255:34,0 chr1 201178845 . T . PASS END=201178848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,108,1620:0,130,255:39,0 chr1 201178849 . G . LowGQ END=201178849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,8:50:0:50:0,0,1213:122,0,255:34,0 chr1 201178850 . A . PASS END=201178856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,111,1665:0,111,255:40,0 chr1 201178857 . A . PASS END=201178857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:50:48:0,50,1582:0,50,255:40,0 chr1 201178858 . G . PASS END=201178865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,131,255:40,0 chr1 201178866 . A . LowGQ END=201178866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,8:50:0:50:0,0,1234:138,0,255:40,0 chr1 201178867 . A . PASS END=201178875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:95:50:0,95,1723:0,95,255:40,0 chr1 201178876 . G A, 2.45 DRAGENSnpHardQUAL DP=51;MQ=127.36;MQRankSum=-3.989;ReadPosRankSum=-3.163;FractionInformativeReads=0.961;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:40,9,0:0.184,0.000:49:24,5,0:16,4,0:4:34,0,50,318,1389,1707:190,0,255:37,0:2.4548e+00,3.6475e+00,5.6647e+01,3.2153e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,22,8,1:26,14,6,3 chr1 201178877 . G . PASS END=201178903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:49:0,92,1755:0,92,255:40,0 chr1 201178904 . A G, 38.90 PASS DP=54;MQ=93.95;MQRankSum=-5.010;ReadPosRankSum=-4.214;FractionInformativeReads=0.963;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,22,0:0.423,0.000:52:19,11,0:11,11,0:39:74,0,50,782,1000,1789:255,0,255:27,0:3.8904e+01,5.8066e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,17,17,5:20,10,16,6 chr1 201178905 . A . PASS END=201178923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:54:0,120,1800:0,138,255:40,0 chr1 201178924 . A G, 45.24 PASS DP=56;MQ=87.38;MQRankSum=-5.154;ReadPosRankSum=-0.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:17,14,0:11,14,0:44:80,0,47,180,180,180:255,0,255:23,0:4.5242e+01,1.7473e-04,4.9850e+01,1.8001e+02,2.1478e+02,1.8302e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,18,20,8:19,9,16,12 chr1 201178925 . A . PASS END=201178925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr1 201178926 . G A, 45.24 PASS DP=56;MQ=87.38;MQRankSum=-4.722;ReadPosRankSum=0.820;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,27,0:0.482,0.000:56:18,13,0:11,14,0:44:80,0,47,180,180,180:255,0,255:24,0:4.5242e+01,1.7473e-04,4.9850e+01,1.8001e+02,2.1478e+02,1.8302e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,18,19,8:20,9,15,12 chr1 201178927 . G . PASS END=201178964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:56:0,105,1800:0,105,255:40,0 chr1 201178965 . A G, 46.50 PASS DP=65;MQ=70.23;MQRankSum=-3.202;ReadPosRankSum=1.417;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,32,0:0.500,0.000:64:17,18,0:15,14,0:45:81,0,47,1103,1037,2172:255,0,255:33,0:4.6500e+01,1.3694e-04,5.0400e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,11,18,14:18,14,16,16 chr1 201178966 . G . PASS END=201178976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,3:71:99:70:0,120,1800:0,164,255:40,0 chr1 201178977 . C T, 0.43 DRAGENSnpHardQUAL DP=72;MQ=60.95;MQRankSum=-0.460;ReadPosRankSum=0.936;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:63,9,0:0.125,0.000:72:33,7,0:30,2,0:10:25,0,47,314,2145,2458:139,0,255:40,0:4.2697e-01,1.0286e+01,6.0036e+01,3.2405e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:41,22,2,7:35,28,4,5 chr1 201178978 . A . PASS END=201178983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,180,255:40,0 chr1 201178984 . G . LowGQ END=201178984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,7:73:0:73:0,0,2189:30,0,255:40,0 chr1 201178985 . G . PASS END=201179016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,4:84:98:75:0,98,1800:0,98,255:40,0 chr1 201179017 . A . PASS END=201179049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:82:0,120,1800:0,208,255:40,0 chr1 201179050 . A G, 26.52 PASS DP=82;MQ=63.24;MQRankSum=-6.599;ReadPosRankSum=5.343;FractionInformativeReads=0.951;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:54,24,0:0.308,0.000:78:26,10,0:28,14,0:27:61,0,47,830,1800,2630:255,0,255:40,0:2.6523e+01,9.7287e-03,4.9710e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:33,21,15,9:23,31,11,13:201179050 chr1 201179051 . A . PASS END=201179067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:84:0,120,1800:0,173,255:40,0 chr1 201179068 . G A, 16.43 PASS DP=83;MQ=66.54;MQRankSum=-5.976;ReadPosRankSum=1.880;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:62,21,0:0.253,0.000:83:32,8,0:30,13,0:16:51,0,47,718,2144,2862:255,0,255:40,0:1.6432e+01,9.9951e-02,5.0500e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:43,19,11,10:31,31,12,9:201179050 chr1 201179069 . G . PASS END=201179081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,194,255:40,0 chr1 201179082 . G A, 6.47 DRAGENSnpHardQUAL DP=83;MQ=61.26;MQRankSum=-5.204;ReadPosRankSum=-0.308;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:64,18,0:0.220,0.000:82:32,8,0:32,10,0:6:40,0,47,620,2245,2864:255,0,255:40,0:6.4726e+00,1.1086e+00,5.1509e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:42,22,13,5:38,26,9,9:201179050 chr1 201179083 . A . PASS END=201179127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:58:0,120,1800:0,122,255:40,0 chr1 201179128 . G A, 35.62 PASS DP=53;MQ=48.47;MQRankSum=0.724;ReadPosRankSum=3.564;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:32,20,0:0.385,0.000:52:16,10,0:16,10,0:35:70,0,46,621,1076,1696:255,0,255:33,0:3.5617e+01,1.2523e-03,4.8551e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,14,11,9:14,18,13,7:201179050 chr1 201179129 . G . PASS END=201179148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:54:0,99,1755:0,99,255:40,0 chr1 201179149 . T . PASS END=201179149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:51:54:0,51,1645:0,51,255:40,0 chr1 201179150 . A . PASS END=201179165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:48:0,83,1558:0,83,255:40,0 chr1 201179166 . G . PASS END=201179172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:89:48:0,89,1594:0,89,255:40,0 chr1 201179173 . G . LowGQ END=201179173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,6:48:0:48:0,0,1268:59,0,255:34,0 chr1 201179174 . A . PASS END=201179196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:37:0,87,1320:0,87,255:40,0 chr1 201179197 . G . PASS END=201179197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1227:0,42,255:34,0 chr1 201179198 . C . PASS END=201179199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1295:0,95,255:36,0 chr1 201179200 . G . PASS END=201179200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1149:0,39,255:32,0 chr1 201179201 . G . PASS END=201179204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1288:0,94,255:35,0 chr1 201179205 . C . PASS END=201179205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:8:37:0,8,1094:0,8,255:29,0 chr1 201179206 . A . PASS END=201179210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,92,255:30,0 chr1 201179211 . T . PASS END=201179224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,66,255:22,0 chr1 201179225 . C . PASS END=201179227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:51:25:0,51,765:0,58,255:18,0 chr1 201179228 . G . LowGQ END=201179228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,806:2,0,255:17,0 chr1 201179229 . A . PASS END=201179239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:17:0,42,630:0,51,255:17,0 chr1 201179240 . C . PASS END=201179258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 201179259 . T . PASS END=201179259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 201179260 . A . PASS END=201179261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 201179262 . G . PASS END=201179265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:26:11:0,26,405:0,26,255:9,0 chr1 201179266 . G . PASS END=201179267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:8,0 chr1 201179268 . T . PASS END=201179272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 201179273 . G . PASS END=201179273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr1 201179274 . T . LowGQ END=201179274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:4,0,253:6,0 chr1 201179275 . G . PASS END=201179275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 201179276 . C . PASS END=201179278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 201179279 . C . PASS END=201179279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr1 201179280 . T . PASS END=201179281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 201179282 . A . PASS END=201179282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 201179283 . G . PASS END=201179283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 201179284 . G . PASS END=201179284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 201179285 . G . PASS END=201179286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,243:0,24,243:8,0 chr1 201179287 . A . LowGQ END=201179292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,153:0,0,185:7,0 chr1 201179293 . T . PASS END=201179293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 201179294 . C . PASS END=201179294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 201179295 . A . PASS END=201179295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 201179296 . G . PASS END=201179297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr1 201179298 . G . PASS END=201179299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 201179300 . G . LowGQ END=201179301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,202:0,0,217:7,0 chr1 201179302 . A . PASS END=201179302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 201179303 . A . PASS END=201179304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 201179305 . G . PASS END=201179305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 201179306 . C . PASS END=201179306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 201179307 . A . PASS END=201179308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 201179309 . A . LowGQ END=201179309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,122:48,0,170:5,0 chr1 201179310 . T . PASS END=201179312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 201179313 . T . LowGQ END=201179313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:6,0 chr1 201179314 . A . PASS END=201179314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 201179315 . G . PASS END=201179316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 201179317 . G . PASS END=201179319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr1 201179320 . G . PASS END=201179320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 201179321 . C . LowGQ END=201179321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,205:12,0,217:7,0 chr1 201179322 . T . PASS END=201179336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 201179337 . G . PASS END=201179337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 201179338 . G . PASS END=201179344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 201179345 . G . PASS END=201179347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 201179348 . C . PASS END=201179349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 201179350 . A . PASS END=201179350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 201179351 . T . PASS END=201179352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 201179353 . G . PASS END=201179353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 201179354 . A . PASS END=201179361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,398:0,33,255:12,0 chr1 201179362 . G . PASS END=201179372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,676:0,43,255:19,0 chr1 201179373 . G . PASS END=201179373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 201179374 . G . PASS END=201179374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 201179375 . A . PASS END=201179376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 201179377 . T . PASS END=201179377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:18,0 chr1 201179378 . T . PASS END=201179379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:18,0 chr1 201179380 . T . PASS END=201179380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:18,0 chr1 201179381 . G . PASS END=201179385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 201179386 . C . PASS END=201179386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201179387 . C . PASS END=201179387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 201179388 . T . PASS END=201179388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201179389 . G . PASS END=201179389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr1 201179390 . A . PASS END=201179398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr1 201179399 . G . PASS END=201179399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 201179400 . T . PASS END=201179406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,820:0,65,255:26,0 chr1 201179407 . A . PASS END=201179417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 201179418 . T . PASS END=201179419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 201179420 . T . PASS END=201179420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 201179421 . T . PASS END=201179421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,914:0,34,255:25,0 chr1 201179422 . A . PASS END=201179425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 201179426 . A . PASS END=201179426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 201179427 . T . PASS END=201179427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201179428 . G . PASS END=201179428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr1 201179429 . G . PASS END=201179436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201179437 . A . PASS END=201179437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,837:0,31,255:24,0 chr1 201179438 . G . PASS END=201179440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 201179441 . C . PASS END=201179441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr1 201179442 . T . PASS END=201179443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 201179444 . T . PASS END=201179444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:23,0 chr1 201179445 . A . PASS END=201179448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 201179449 . A . PASS END=201179449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:24,0 chr1 201179450 . T . PASS END=201179460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr1 201179461 . A . PASS END=201179461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,771:0,25,255:22,0 chr1 201179462 . A . PASS END=201179465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 201179466 . G . PASS END=201179466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,820:0,31,255:21,0 chr1 201179467 . G . PASS END=201179467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:23,0 chr1 201179468 . C . PASS END=201179468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,861:0,26,255:22,0 chr1 201179469 . A . PASS END=201179472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,903:0,78,255:26,0 chr1 201179473 . T . PASS END=201179475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 201179476 . A . PASS END=201179476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:26,0 chr1 201179477 . G . PASS END=201179477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 201179478 . G . PASS END=201179478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:25,0 chr1 201179479 . A . PASS END=201179479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 201179480 . A . PASS END=201179480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 201179481 . G . PASS END=201179484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,770:0,80,255:27,0 chr1 201179485 . T . PASS END=201179485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,921:0,65,255:26,0 chr1 201179486 . T . PASS END=201179486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr1 201179487 . G . PASS END=201179487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 201179488 . G . PASS END=201179488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,847:0,26,255:25,0 chr1 201179489 . G . PASS END=201179489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 201179490 . G . PASS END=201179490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 201179491 . G . PASS END=201179491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr1 201179492 . C . PASS END=201179492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 201179493 . T . PASS END=201179493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,849:0,81,255:27,0 chr1 201179494 . C . PASS END=201179500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr1 201179501 . G . PASS END=201179501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:26,0 chr1 201179502 . A . PASS END=201179504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,960:0,67,255:23,0 chr1 201179505 . G . PASS END=201179505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,870:0,29,255:21,0 chr1 201179506 . G . PASS END=201179507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:22,0 chr1 201179508 . T . PASS END=201179508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,867:0,34,255:21,0 chr1 201179509 . T . PASS END=201179511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:24,0 chr1 201179512 . G . PASS END=201179512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:20,0 chr1 201179513 . G . PASS END=201179516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,911:0,67,255:23,0 chr1 201179517 . T . PASS END=201179517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,881:0,34,255:21,0 chr1 201179518 . A . PASS END=201179520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:23,0 chr1 201179521 . G . PASS END=201179521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:22,0 chr1 201179522 . C . PASS END=201179524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 201179525 . G . PASS END=201179528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,821:0,56,255:22,0 chr1 201179529 . C . PASS END=201179529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:19,0 chr1 201179530 . A . PASS END=201179537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:19,0 chr1 201179538 . T . PASS END=201179539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,738:0,36,255:18,0 chr1 201179540 . T . PASS END=201179560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,599:0,51,255:18,0 chr1 201179561 . G . PASS END=201179561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 201179562 . G . PASS END=201179562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 201179563 . T . PASS END=201179563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 201179564 . C . PASS END=201179564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 201179565 . A . PASS END=201179567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:17:0,37,585:0,37,255:15,0 chr1 201179568 . G . PASS END=201179569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 201179570 . A . PASS END=201179570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 201179571 . T . PASS END=201179571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 201179572 . G . PASS END=201179572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr1 201179573 . A . PASS END=201179573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:12,0 chr1 201179574 . A . PASS END=201179575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:34:17:0,34,543:0,34,255:13,0 chr1 201179576 . C . PASS END=201179576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:11,0 chr1 201179577 . A . PASS END=201179577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:11,0 chr1 201179578 . G . PASS END=201179578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 201179579 . G . PASS END=201179579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:11,0 chr1 201179580 . T . PASS END=201179581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 201179582 . A . PASS END=201179587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:23:13:0,23,433:0,23,255:11,0 chr1 201179588 . A . PASS END=201179589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 201179590 . G . PASS END=201179590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr1 201179591 . A . PASS END=201179592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201179593 . T . PASS END=201179594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 201179595 . G . PASS END=201179595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201179596 . G . LowGQ END=201179599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:13:0,0,331:0,0,255:12,0 chr1 201179600 . C . PASS END=201179606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,433:0,23,255:12,0 chr1 201179607 . G . PASS END=201179611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 201179612 . T . PASS END=201179612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:8,0 chr1 201179613 . A G, 0.16 DRAGENSnpHardQUAL DP=12;MQ=21.13;MQRankSum=-2.256;ReadPosRankSum=1.182;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,2,0:0.167,0.000:12:5,1,0:5,1,0:14:20,0,31,72,328,399:69,0,255:5,0:1.5810e-01,1.4469e+01,4.8802e+01,8.6104e+01,3.7684e+02,4.1670e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,2,0:5,5,1,1 chr1 201179614 . G . PASS END=201179614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr1 201179615 . G . PASS END=201179621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 201179622 . G . PASS END=201179622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 201179623 . A . PASS END=201179626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,282:0,16,255:9,0 chr1 201179627 . A . PASS END=201179630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201179631 . A . PASS END=201179632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 201179633 . A G, 2.80 DRAGENSnpHardQUAL DP=8;MQ=17.66;MQRankSum=-1.589;ReadPosRankSum=1.067;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,2,0:0.250,0.000:8:2,1,0:4,1,0:3:34,0,31,72,178,249:48,0,228:8,0:2.7998e+00,3.2332e+00,3.7566e+01,7.4816e+01,2.1585e+02,2.5567e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,1,2,0:3,3,1,1 chr1 201179634 . T . PASS END=201179634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 201179635 . T . PASS END=201179635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 201179636 . T . PASS END=201179637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 201179638 . A . PASS END=201179639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 201179640 . G . LowGQ END=201179640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:8,0 chr1 201179641 . G . PASS END=201179642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 201179643 . T . PASS END=201179643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 201179644 . G . PASS END=201179644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 201179645 . C G, 2.93 DRAGENSnpHardQUAL DP=8;MQ=17.66;MQRankSum=-1.589;ReadPosRankSum=1.589;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,2,0:0.250,0.000:8:2,1,0:4,1,0:3:35,0,31,72,141,213:48,0,197:7,0:2.9314e+00,3.0923e+00,3.7426e+01,7.4727e+01,1.7882e+02,2.1868e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,1,2,0:3,3,1,1 chr1 201179646 . T . PASS END=201179653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr1 201179654 . G . PASS END=201179669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:12,0 chr1 201179670 . G . PASS END=201179670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 201179671 . T . PASS END=201179680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,429:0,36,255:13,0 chr1 201179681 . A . PASS END=201179683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201179684 . C . PASS END=201179685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201179686 . G . PASS END=201179698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,676:0,54,255:19,0 chr1 201179699 . A . PASS END=201179703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201179704 . T . PASS END=201179704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,629:0,8,255:18,0 chr1 201179705 . G . PASS END=201179716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,699:0,60,255:26,0 chr1 201179717 . G . PASS END=201179720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 201179721 . A . PASS END=201179721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr1 201179722 . G . PASS END=201179722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 201179723 . G . PASS END=201179724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 201179725 . T . PASS END=201179728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 201179729 . G . PASS END=201179729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr1 201179730 . A . PASS END=201179738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1131:0,80,255:33,0 chr1 201179739 . A . PASS END=201179739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:31,0 chr1 201179740 . G . PASS END=201179749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:34:0,94,1235:0,94,255:37,0 chr1 201179750 . A . PASS END=201179750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1227:0,56,255:33,0 chr1 201179751 . T . PASS END=201179760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,105,1418:0,111,255:40,0 chr1 201179761 . A . PASS END=201179761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1407:0,74,255:39,0 chr1 201179762 . G . PASS END=201179768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,110,1491:0,110,255:40,0 chr1 201179769 . A . PASS END=201179769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1362:0,78,255:40,0 chr1 201179770 . G . PASS END=201179770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1504:0,110,255:40,0 chr1 201179771 . A . PASS END=201179771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:40,0 chr1 201179772 . A . PASS END=201179948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:42:0,83,1399:0,83,255:40,0 chr1 201179949 . T . PASS END=201179949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1709:0,76,255:40,0 chr1 201179950 . A . PASS END=201179953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,140,255:40,0 chr1 201179954 . A . PASS END=201179954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1756:0,79,255:40,0 chr1 201179955 . A . PASS END=201179976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:91:52:0,91,1726:0,91,255:40,0 chr1 201179977 . G . PASS END=201179977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:68:54:0,68,1762:0,68,255:40,0 chr1 201179978 . G . PASS END=201179983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,127,255:40,0 chr1 201179984 . A . PASS END=201179984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:42:48:0,42,1535:0,42,255:40,0 chr1 201179985 . G . PASS END=201180017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:92:48:0,92,1573:0,92,255:40,0 chr1 201180018 . G . PASS END=201180018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1631:0,78,255:40,0 chr1 201180019 . A . PASS END=201180028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:85:45:0,85,1469:0,85,255:40,0 chr1 201180029 . G . PASS END=201180029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1482:0,71,255:40,0 chr1 201180030 . G . PASS END=201180031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:45:0,96,1538:0,96,255:40,0 chr1 201180032 . C . PASS END=201180036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,102,1404:0,102,255:40,0 chr1 201180037 . G . PASS END=201180037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1374:0,69,255:38,0 chr1 201180038 . A . PASS END=201180039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,99,1615:0,99,255:40,0 chr1 201180040 . G . PASS END=201180040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1515:0,69,255:40,0 chr1 201180041 . G . PASS END=201180047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:86:46:0,86,1496:0,86,255:40,0 chr1 201180048 . T . PASS END=201180048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:49:46:0,49,1405:0,49,255:38,0 chr1 201180049 . T . PASS END=201180052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,118,1592:0,118,255:40,0 chr1 201180053 . G . PASS END=201180054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:41:45:0,41,1441:0,41,255:40,0 chr1 201180055 . A . PASS END=201180056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:47:0,108,1651:0,108,255:40,0 chr1 201180057 . T . PASS END=201180057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1515:0,69,255:40,0 chr1 201180058 . A . PASS END=201180068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,102,1637:0,102,255:40,0 chr1 201180069 . C . LowGQ END=201180069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,8:47:0:47:0,0,1208:80,0,255:37,0 chr1 201180070 . A . PASS END=201180084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,108,1620:0,108,255:40,0 chr1 201180085 . G . LowGQ END=201180085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,6:48:0:48:0,0,1349:66,0,255:37,0 chr1 201180086 . G . PASS END=201180091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1468:0,112,255:40,0 chr1 201180092 . A . LowGQ END=201180093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:0:43:0,0,1077:43,0,255:34,0 chr1 201180094 . G . PASS END=201180099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,111,1665:0,116,255:39,0 chr1 201180100 . C G, 5.55 DRAGENSnpHardQUAL DP=43;MQ=78.67;MQRankSum=-3.142;ReadPosRankSum=1.069;FractionInformativeReads=0.953;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,8,0:0.195,0.000:41:19,3,0:14,5,0:6:39,0,47,254,1074,1343:201,0,255:29,0:5.5457e+00,1.4200e+00,5.1470e+01,2.5569e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,18,5,3:17,16,4,4 chr1 201180101 . G . PASS END=201180144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:86:42:0,86,1582:0,86,255:40,0 chr1 201180145 . G A, 34.82 PASS DP=51;MQ=57.86;MQRankSum=-0.244;ReadPosRankSum=1.471;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:32,19,0:0.373,0.000:51:18,10,0:14,9,0:34:70,0,43,170,170,170:255,0,255:31,0:3.4824e+01,1.5457e-03,4.5752e+01,1.6959e+02,2.0436e+02,1.7260e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,12,6,13:16,16,15,4:201180145 chr1 201180146 . A . PASS END=201180147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr1 201180148 . A G, 31.08 PASS DP=52;MQ=57.82;MQRankSum=-0.614;ReadPosRankSum=1.065;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:33,17,0:0.340,0.000:50:19,8,0:14,9,0:31:66,0,43,166,166,166:255,0,255:33,0:3.1079e+01,3.5048e-03,4.5754e+01,1.6585e+02,2.0062e+02,1.6886e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,13,5,12:16,17,14,3:201180145 chr1 201180149 . G . PASS END=201180152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,113,1800:0,113,255:40,0 chr1 201180153 . A G, 28.44 PASS DP=53;MQ=56.85;MQRankSum=-1.402;ReadPosRankSum=2.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:39,14,0:0.264,0.000:53:23,8,0:16,6,0:28:63,0,43,163,163,163:255,0,255:39,0:2.8441e+01,6.3389e-03,4.5756e+01,1.6321e+02,1.9798e+02,1.6622e+02:0.00,34.77,37.78,34.77,69.54,37.78:25,14,6,8:19,20,12,2:201180145 chr1 201180154 . G . PASS END=201180161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,155,255:40,0 chr1 201180162 . A C, 3.45 DRAGENSnpHardQUAL DP=59;MQ=59.63;MQRankSum=-1.904;ReadPosRankSum=1.646;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:47,11,0:0.190,0.000:58:29,5,0:18,6,0:3:36,0,46,339,1606,1977:244,0,255:40,0:3.4540e+00,2.6078e+00,5.1358e+01,3.4152e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,17,4,7:24,23,10,1:201180145 chr1 201180163 . A . PASS END=201180171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:59:0,120,1800:0,167,255:40,0 chr1 201180172 . G A, 4.95 DRAGENSnpHardQUAL DP=62;MQ=59.40;MQRankSum=-2.200;ReadPosRankSum=-0.009;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:50,12,0:0.194,0.000:62:30,6,0:20,6,0:5:38,0,46,421,1780,2201:255,0,255:40,0:4.9457e+00,1.6763e+00,5.0426e+01,4.2291e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:31,19,5,7:25,25,11,1:201180145 chr1 201180173 . G . PASS END=201180192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,164,255:40,0 chr1 201180193 . A G, 0.04 DRAGENSnpHardQUAL DP=65;MQ=73.16;MQRankSum=-2.690;ReadPosRankSum=-2.182;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:56,8,0:0.125,0.000:64:32,3,0:24,5,0:20:15,0,47,272,1913,2185:110,0,255:40,0:4.1780e-02,2.0189e+01,7.0589e+01,2.9209e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:31,25,2,6:27,29,7,1:201180145 chr1 201180194 . G . PASS END=201180199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr1 201180200 . T . PASS END=201180200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:25:63:0,25,1950:0,25,255:40,0 chr1 201180201 . A . PASS END=201180242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:82:60:0,82,1800:0,82,255:40,0 chr1 201180243 . A G, 43.48 PASS DP=70;MQ=79.22;MQRankSum=-3.541;ReadPosRankSum=2.358;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,31,0:0.449,0.000:69:28,12,0:10,19,0:43:78,0,48,800,1237,2037:255,0,255:37,0:4.3478e+01,2.3376e-04,5.0500e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,17,22,9:21,17,15,16 chr1 201180244 . G . PASS END=201180276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:67:0,120,1800:0,149,255:40,0 chr1 201180277 . A . PASS END=201180277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,7:75:59:75:0,59,2285:0,59,255:40,0 chr1 201180278 . C . PASS END=201180280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr1 201180281 . G . PASS END=201180463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:63:0,108,1800:0,108,255:40,0 chr1 201180464 . C . PASS END=201180484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,166,255:40,0 chr1 201180485 . A . PASS END=201180485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,5:69:58:69:0,58,2197:0,58,255:40,0 chr1 201180486 . G . PASS END=201180500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:59:0,112,1800:0,112,255:40,0 chr1 201180501 . T C, 46.35 PASS DP=56;MQ=101.06;MQRankSum=-2.541;ReadPosRankSum=3.667;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,32,0:0.571,0.000:56:10,21,0:14,11,0:45:81,0,46,1058,793,1851:255,0,255:24,0:4.6350e+01,1.5169e-04,4.9289e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,16,16:12,12,13,19 chr1 201180502 . A . PASS END=201180538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:53:0,113,1800:0,113,255:40,0 chr1 201180539 . T . PASS END=201180608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,107,1636:0,107,255:40,0 chr1 201180609 . C . PASS END=201180609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:49:53:0,49,1729:0,49,255:40,0 chr1 201180610 . A . PASS END=201180991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:38:0,80,1305:0,80,255:40,0 chr1 201180992 . A . PASS END=201180993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1123:0,66,255:33,0 chr1 201180994 . G . PASS END=201180994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 201180995 . G . PASS END=201180995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 201180996 . C . PASS END=201181042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1088:0,88,255:34,0 chr1 201181043 . G . PASS END=201181072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,930:0,62,255:26,0 chr1 201181073 . G . PASS END=201181078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:25,0 chr1 201181079 . A . PASS END=201181079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:17,0 chr1 201181080 . G . PASS END=201181086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:21,0 chr1 201181087 . A . PASS END=201181091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,810:0,48,255:19,0 chr1 201181092 . T . PASS END=201181100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:20,0 chr1 201181101 . T . PASS END=201181109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 201181110 . G T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=2.532;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:7,7,0:3,3,0:48:85,0,50,350,357,707:255,0,255:8,0:5.0000e+01,6.5233e-05,5.3000e+01,3.4962e+02,3.9211e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,7,3:6,4,6,4 chr1 201181111 . A . PASS END=201181147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 201181148 . A . PASS END=201181173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 201181174 . G . PASS END=201181176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 201181177 . A . PASS END=201181180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 201181181 . G . PASS END=201181181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 201181182 . T . PASS END=201181191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,686:0,60,255:21,0 chr1 201181192 . G . PASS END=201181192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 201181193 . G . PASS END=201181195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201181196 . A . PASS END=201181196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 201181197 . T . PASS END=201181201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 201181202 . T . PASS END=201181203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,737:0,47,255:20,0 chr1 201181204 . G . PASS END=201181207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201181208 . C . PASS END=201181208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr1 201181209 . A . PASS END=201181212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201181213 . G . PASS END=201181213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 201181214 . G . PASS END=201181215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 201181216 . G . PASS END=201181216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 201181217 . A G, 48.04 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=2.816;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,8,0:0.400,0.000:20:6,3,0:6,5,0:46:83,0,47,183,183,183:228,0,255:11,0:4.8037e+01,1.1157e-04,5.0000e+01,1.8281e+02,2.1758e+02,1.8582e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,7,5,3:5,7,4,4:201181217 chr1 201181218 . C . PASS END=201181222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 201181223 . A G, 287.04 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,20,0:1.000,0.000:20:0,9,0:0,11,0:237:325,240,0,425,425,425:255,60,0:0,0:2.8704e+02,2.3704e+02,0.0000e+00,4.2181e+02,4.5000e+02,4.2482e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,10:0,0,9,11:201181217 chr1 201181224 . C . PASS END=201181232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:15,0 chr1 201181233 . T . PASS END=201181233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 201181234 . G . PASS END=201181234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 201181235 . G . PASS END=201181235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 201181236 . T . PASS END=201181246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,690:0,44,255:19,0 chr1 201181247 . C . PASS END=201181247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr1 201181248 . C . PASS END=201181250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201181251 . G . PASS END=201181258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201181259 . G . PASS END=201181263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201181264 . G . PASS END=201181284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,666:0,44,255:19,0 chr1 201181285 . G . PASS END=201181290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 201181291 . C . PASS END=201181291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 201181292 . C . PASS END=201181295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201181296 . G . PASS END=201181327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:18,0 chr1 201181328 . T . PASS END=201181363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 201181364 . T . PASS END=201181364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 201181365 . G . PASS END=201181409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,507:0,45,255:17,0 chr1 201181410 . C . PASS END=201181412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 201181413 . C . PASS END=201181413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 201181414 . A . PASS END=201181419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,619:0,51,255:18,0 chr1 201181420 . C . PASS END=201181420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 201181421 . T . PASS END=201181446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 201181447 . C T, 49.93 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=1.837;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:6,5,0:4,4,0:48:85,0,50,322,329,651:255,0,255:8,0:4.9931e+01,6.5751e-05,5.3000e+01,3.2187e+02,3.6362e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,5,4:5,5,5,4 chr1 201181448 . C . PASS END=201181484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,623:0,54,255:19,0 chr1 201181485 . A . PASS END=201181548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,590:0,47,255:19,0 chr1 201181549 . A . PASS END=201181549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 201181550 . G . PASS END=201181554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 201181555 . A . PASS END=201181556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 201181557 . G . PASS END=201181572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,468:0,42,255:15,0 chr1 201181573 . C . PASS END=201181573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr1 201181574 . A . PASS END=201181591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,459:0,39,255:13,0 chr1 201181592 . C . PASS END=201181592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 201181593 . T . PASS END=201181601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 201181602 . T . PASS END=201181602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr1 201181603 . C . PASS END=201181604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201181605 . T . PASS END=201181605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:12,0 chr1 201181606 . G . PASS END=201181607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201181608 . T . PASS END=201181618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 201181619 . C . PASS END=201181619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 201181620 . A . PASS END=201181620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 201181621 . G . PASS END=201181625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201181626 . A . PASS END=201181626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 201181627 . G . PASS END=201181631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 201181632 . G . PASS END=201181632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 201181633 . A . PASS END=201181645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,574:0,48,255:17,0 chr1 201181646 . T . PASS END=201181646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 201181647 . G . PASS END=201181679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr1 201181680 . C . PASS END=201181685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:23,0 chr1 201181686 . A . PASS END=201181686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 201181687 . G . PASS END=201181693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 201181694 . C . PASS END=201181695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 201181696 . G . PASS END=201181700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,797:0,69,255:25,0 chr1 201181701 . G . PASS END=201181701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 201181702 . A . PASS END=201181715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,917:0,75,255:25,0 chr1 201181716 . A . PASS END=201181716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,799:0,58,255:22,0 chr1 201181717 . G . PASS END=201181718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 201181719 . T . PASS END=201181719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 201181720 . G . PASS END=201181725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 201181726 . C . PASS END=201181727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 201181728 . G . PASS END=201181734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 201181735 . T . PASS END=201181735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 201181736 . T . PASS END=201181760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:22,0 chr1 201181761 . A . PASS END=201181761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 201181762 . C . PASS END=201181766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 201181767 . G . PASS END=201181771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 201181772 . G . PASS END=201181774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201181775 . G . PASS END=201181782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 201181783 . G . PASS END=201181791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 201181792 . A . PASS END=201181792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 201181793 . G . PASS END=201181855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,914:0,62,255:26,0 chr1 201181856 . C . PASS END=201181856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr1 201181857 . A . PASS END=201181857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 201181858 . T . PASS END=201181858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 201181859 . C . PASS END=201181871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr1 201181872 . T . PASS END=201181872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 201181873 . A . PASS END=201181925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,839:0,62,255:26,0 chr1 201181926 . C . PASS END=201181926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:21,0 chr1 201181927 . C . PASS END=201181927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 201181928 . A . PASS END=201181933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr1 201181934 . G . PASS END=201181942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 201181943 . C . PASS END=201181946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201181947 . G . PASS END=201181947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201181948 . A . PASS END=201181949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 201181950 . G . PASS END=201182000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,739:0,63,255:23,0 chr1 201182001 . T . PASS END=201182001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 201182002 . T . PASS END=201182052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,951:0,65,255:26,0 chr1 201182053 . C . PASS END=201182066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 201182067 . G . PASS END=201182067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 201182068 . G . PASS END=201182070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201182071 . G . PASS END=201182071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 201182072 . G . PASS END=201182074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201182075 . G . PASS END=201182103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,969:0,65,255:26,0 chr1 201182104 . A . PASS END=201182104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 201182105 . A . PASS END=201182109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201182110 . T . PASS END=201182110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr1 201182111 . C . PASS END=201182144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,817:0,61,255:26,0 chr1 201182145 . G . PASS END=201182145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201182146 . G . PASS END=201182151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 201182152 . G . PASS END=201182152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201182153 . G . PASS END=201182154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201182155 . A . PASS END=201182166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201182167 . G . PASS END=201182180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1016:0,71,255:26,0 chr1 201182181 . G . PASS END=201182184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201182185 . G . PASS END=201182216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,818:0,61,255:26,0 chr1 201182217 . C . PASS END=201182217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:21,0 chr1 201182218 . G . PASS END=201182241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,856:0,62,255:25,0 chr1 201182242 . T . PASS END=201182242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:24,0 chr1 201182243 . T . PASS END=201182254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,885:0,64,255:25,0 chr1 201182255 . T . PASS END=201182255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr1 201182256 . T . PASS END=201182259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 201182260 . A . PASS END=201182260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,807:0,41,255:23,0 chr1 201182261 . G . PASS END=201182261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 201182262 . A . PASS END=201182262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr1 201182263 . A . PASS END=201182263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 201182264 . A . PASS END=201182264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 201182265 . A . PASS END=201182265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 201182266 . G . PASS END=201182275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr1 201182276 . A . PASS END=201182276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:23,0 chr1 201182277 . T . PASS END=201182293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:25,0 chr1 201182294 . A . PASS END=201182294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:4:27:0,4,823:0,4,255:19,0 chr1 201182295 . G . PASS END=201182304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:23,0 chr1 201182305 . T . PASS END=201182305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:21,0 chr1 201182306 . C . PASS END=201182306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 201182307 . T . PASS END=201182307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 201182308 . C . PASS END=201182308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201182309 . A . PASS END=201182309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:21,0 chr1 201182310 . G . PASS END=201182318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 201182319 . G . PASS END=201182319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201182320 . G . PASS END=201182369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,833:0,62,255:25,0 chr1 201182370 . T . PASS END=201182370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr1 201182371 . G . PASS END=201182374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,856:0,64,255:25,0 chr1 201182375 . A . PASS END=201182376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,899:0,42,255:26,0 chr1 201182377 . G . PASS END=201182398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,955:0,65,255:26,0 chr1 201182399 . C . PASS END=201182410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 201182411 . A . PASS END=201182411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 201182412 . T . PASS END=201182417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 201182418 . G . PASS END=201182422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,1033:0,73,255:28,0 chr1 201182423 . G . PASS END=201182436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 201182437 . G . PASS END=201182437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:28,0 chr1 201182438 . G . PASS END=201182456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 201182457 . T . PASS END=201182457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,942:0,56,255:27,0 chr1 201182458 . G . PASS END=201182464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr1 201182465 . T . PASS END=201182465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr1 201182466 . C . PASS END=201182470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201182471 . G . PASS END=201182475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 201182476 . T . PASS END=201182476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201182477 . C . PASS END=201182483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1078:0,74,255:26,0 chr1 201182484 . A . PASS END=201182484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:24,0 chr1 201182485 . C . PASS END=201182485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr1 201182486 . A . PASS END=201182486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201182487 . G . PASS END=201182488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201182489 . C . PASS END=201182520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,840:0,61,255:26,0 chr1 201182521 . G . PASS END=201182522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,820:0,53,255:20,0 chr1 201182523 . A . PASS END=201182523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201182524 . G . PASS END=201182524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr1 201182525 . C . PASS END=201182527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,930:0,62,255:22,0 chr1 201182528 . A . PASS END=201182528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:22,0 chr1 201182529 . C . PASS END=201182530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 201182531 . A . PASS END=201182531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 201182532 . G . PASS END=201182541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 201182542 . A . PASS END=201182542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 201182543 . T . PASS END=201182550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 201182551 . C . PASS END=201182551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 201182552 . A . PASS END=201182563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 201182564 . A . PASS END=201182564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,815:0,36,255:22,0 chr1 201182565 . G . PASS END=201182583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,857:0,67,255:26,0 chr1 201182584 . G . PASS END=201182596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 201182597 . A . PASS END=201182606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 201182607 . C . PASS END=201182610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201182611 . G . PASS END=201182611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 201182612 . A . PASS END=201182613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 201182614 . C . PASS END=201182617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201182618 . C . PASS END=201182636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1141:0,80,255:29,0 chr1 201182637 . G . PASS END=201182638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 201182639 . G . PASS END=201182676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1117:0,80,255:33,0 chr1 201182677 . A . PASS END=201182677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1105:0,75,255:31,0 chr1 201182678 . G . PASS END=201182684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1127:0,85,255:33,0 chr1 201182685 . T . PASS END=201182685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1083:0,71,255:30,0 chr1 201182686 . G . PASS END=201182692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1255:0,89,255:31,0 chr1 201182693 . G . PASS END=201182703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 201182704 . T . PASS END=201182704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 201182705 . C . PASS END=201182727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr1 201182728 . A . PASS END=201182728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 201182729 . G . PASS END=201182746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:23,0 chr1 201182747 . A . PASS END=201182749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201183305 . G . PASS END=201183317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr1 201183318 . C . PASS END=201183325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:23,0 chr1 201183326 . A . PASS END=201183340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:24,0 chr1 201183341 . T . PASS END=201183341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 201183342 . G . PASS END=201183345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 201183346 . G . PASS END=201183349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 201183350 . A . PASS END=201183361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 201183362 . C . PASS END=201183362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201183363 . C T, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.480;ReadPosRankSum=1.355;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:10,10,0:4,4,0:48:85,0,50,467,501,968:255,0,255:14,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,9,5:6,8,5,9 chr1 201183364 . G . PASS END=201183388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1015:0,81,255:28,0 chr1 201183389 . G . PASS END=201183397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr1 201183398 . G . PASS END=201183399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:22,0 chr1 201183400 . C . PASS END=201183400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 201183401 . C . PASS END=201183426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 201183427 . A . PASS END=201183427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 201183428 . A . PASS END=201183429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 201184141 . C . PASS END=201184237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:33:0,99,1257:0,99,255:40,0 chr1 201184238 . T . PASS END=201184274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,147,255:40,0 chr1 201184275 . C T, 49.33 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=1.169;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,22,0:0.458,0.000:48:12,9,0:14,13,0:48:84,0,50,743,931,1674:255,0,255:24,0:4.9332e+01,7.2481e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,16,8,14:14,12,13,9 chr1 201184276 . G . PASS END=201184282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,114,1710:0,141,255:40,0 chr1 201184667 . A . PASS END=201184670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 201184671 . C . PASS END=201184681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,402:0,33,255:13,0 chr1 201184682 . C . PASS END=201184718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 201184719 . G . PASS END=201184721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 201184722 . C . PASS END=201184723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 201184724 . A . PASS END=201184754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr1 201184755 . C . PASS END=201184771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1027:0,84,255:30,0 chr1 201184772 . C . PASS END=201184772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 201184773 . C . PASS END=201184773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 201184774 . A . PASS END=201184774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1084:0,55,255:29,0 chr1 201184775 . T . PASS END=201184780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 201184781 . C . PASS END=201184781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr1 201184782 . T . PASS END=201184830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1172:0,89,255:35,0 chr1 201184831 . G . PASS END=201184831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201184832 . C . PASS END=201184837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 201184838 . T . PASS END=201184838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr1 201184839 . G . PASS END=201184848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 201184849 . G . PASS END=201184875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 201184876 . A . PASS END=201184876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 201184877 . G . PASS END=201184879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201184880 . C . PASS END=201184886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 201184887 . G . PASS END=201184888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 201184889 . A . PASS END=201184901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,60,255:19,0 chr1 201184902 . G . PASS END=201184902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 201184903 . T . PASS END=201184906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 201184907 . G . PASS END=201184909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201184910 . T . PASS END=201184926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 201184927 . G . PASS END=201184930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 201184931 . G . PASS END=201184953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 201184954 . C . PASS END=201184954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 201184955 . T . PASS END=201184966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr1 201185094 . A . PASS END=201185108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:32,0 chr1 201185109 . T . PASS END=201185109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201185110 . A . PASS END=201185111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201185582 . A . PASS END=201185586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 201185587 . C . PASS END=201185587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 201185588 . C . PASS END=201185601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:19,0 chr1 201185602 . G . PASS END=201185602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr1 201185603 . G . PASS END=201185603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201185604 . C . PASS END=201185618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:22,0 chr1 201185619 . G . PASS END=201185619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,665:0,16,255:19,0 chr1 201185620 . G . PASS END=201185622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 201185623 . T . PASS END=201185623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 201185624 . G . PASS END=201185625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201185626 . C . PASS END=201185626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 201185627 . A . PASS END=201185628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:33:22:0,33,698:0,33,255:20,0 chr1 201185629 . A . PASS END=201185635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 201185636 . G . PASS END=201185636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 201185637 . C . PASS END=201185641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 201185642 . G . PASS END=201185642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 201185643 . C . PASS END=201185660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr1 201185661 . A . PASS END=201185682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,651:0,41,255:19,0 chr1 201185683 . G . PASS END=201185685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201185686 . G . PASS END=201185697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,670:0,47,255:19,0 chr1 201185698 . G . PASS END=201185701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 201185702 . A . PASS END=201185712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 201185713 . G . PASS END=201185718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 201185719 . A . PASS END=201185719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 201185720 . G . PASS END=201185721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201185722 . A . PASS END=201185722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 201185723 . G . PASS END=201185726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 201185727 . T . PASS END=201185728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201185729 . G . PASS END=201185763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr1 201185764 . A . PASS END=201185764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201185765 . C . PASS END=201185770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,743:0,60,255:20,0 chr1 201185771 . C . PASS END=201185784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 201185785 . G . PASS END=201185788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201185789 . C . PASS END=201185789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 201185790 . A . PASS END=201185793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 201185794 . A . PASS END=201185821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:18,0 chr1 201185822 . T . PASS END=201185822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr1 201185823 . G . PASS END=201185828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 201185829 . A . PASS END=201185829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 201185830 . G . PASS END=201185830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 201185831 . A . PASS END=201185831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr1 201185832 . G . PASS END=201185832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201185833 . G . PASS END=201185836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 201185837 . C . PASS END=201185837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 201185838 . T . PASS END=201185840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 201185841 . C . PASS END=201185841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:9,0 chr1 201185842 . G . PASS END=201185843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:10,0 chr1 201185844 . G . PASS END=201185845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 201185846 . C . PASS END=201185847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 201185848 . C . PASS END=201185848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr1 201185849 . T . PASS END=201185857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,418:0,33,255:11,0 chr1 201185858 . A . PASS END=201185859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,347:0,16,255:9,0 chr1 201185860 . G . PASS END=201185860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201185861 . A . PASS END=201185872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,319:0,27,255:9,0 chr1 201185873 . C . PASS END=201185873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 201185874 . T . PASS END=201185878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 201185879 . A . PASS END=201185879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr1 201185880 . G . PASS END=201185881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 201186415 . C . PASS END=201186416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201186417 . C . PASS END=201186450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1125:0,80,255:32,0 chr1 201186451 . C . PASS END=201186451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:26,0 chr1 201186452 . G . PASS END=201186463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 201186464 . G . PASS END=201186470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 201186471 . A . PASS END=201186471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201186472 . C . PASS END=201186505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,864:0,72,255:26,0 chr1 201186506 . C . PASS END=201186506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:20,0 chr1 201186507 . G . PASS END=201186510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 201186511 . A . PASS END=201186511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 201186512 . C . PASS END=201186513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 201186514 . T . PASS END=201186520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201186521 . C . PASS END=201186532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 201186533 . G . PASS END=201186557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr1 201186558 . T . PASS END=201186558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,520:0,21,255:14,0 chr1 201186559 . G . PASS END=201186567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 201186568 . T . PASS END=201186568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 201186569 . G . PASS END=201186573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201186574 . A . PASS END=201186588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 201187658 . A . PASS END=201187726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,105,1595:0,105,255:40,0 chr1 201187727 . C . PASS END=201187763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,141,255:40,0 chr1 201187764 . T C, 182.43 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,24,0:0,21,0:132:220,135,0,1737,135,1737:255,135,0:0,0:1.8243e+02,1.3243e+02,0.0000e+00,4.5000e+02,1.6720e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,28:0,0,24,21 chr1 201187765 . G . PASS END=201187786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:40:0,93,1395:0,120,255:40,0 chr1 201190572 . G . PASS END=201190574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 201190575 . C . PASS END=201190575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 201190576 . C . PASS END=201190652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:14:0,40,507:0,40,255:19,0 chr1 201190653 . C . PASS END=201190657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201190658 . G . PASS END=201190658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 201190659 . A . PASS END=201190667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr1 201190668 . A . PASS END=201190682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,662:0,57,255:19,0 chr1 201190683 . T . PASS END=201190685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201190686 . T . PASS END=201190686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 201190687 . G . PASS END=201190697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:26,0 chr1 201190698 . G . PASS END=201190703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 201190704 . A . PASS END=201190708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 201190709 . C . PASS END=201190715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201190716 . G . PASS END=201190717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201190718 . C . PASS END=201190720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201190721 . C . PASS END=201190721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 201190722 . C . PASS END=201190725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 201190726 . C . PASS END=201190726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 201190727 . C . PASS END=201190740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 201190741 . G . PASS END=201190777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr1 201190778 . G . PASS END=201190827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1147:0,90,255:33,0 chr1 201190828 . C . PASS END=201190844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,71,255:26,0 chr1 201190845 . A . PASS END=201190869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:19,0 chr1 201190870 . T . PASS END=201190870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 201190871 . A . PASS END=201190873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 201190874 . G . PASS END=201190874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 201191867 . T . PASS END=201191867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 201191868 . C . PASS END=201191912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr1 201191913 . A . PASS END=201191914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201191915 . T . PASS END=201191917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201191918 . A . PASS END=201191919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201191920 . G . PASS END=201191920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201191921 . T . PASS END=201191924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1039:0,71,255:26,0 chr1 201191925 . G . PASS END=201191926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201191927 . A . PASS END=201191955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:26:0,67,871:0,67,255:26,0 chr1 201193807 . G . PASS END=201193807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 201193808 . C . PASS END=201193808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 201193809 . C . PASS END=201193817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,784:0,66,255:26,0 chr1 201193818 . G . PASS END=201193820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 201193821 . T . PASS END=201193821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,990:0,68,255:27,0 chr1 201193822 . G . PASS END=201193884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:30:0,89,1119:0,89,255:36,0 chr1 201193885 . G . PASS END=201193885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 201193886 . G . PASS END=201193900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 201193901 . T . PASS END=201193901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 201193902 . G . PASS END=201193903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 201193904 . T . PASS END=201193904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 201193905 . C . PASS END=201193907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 201193908 . T . PASS END=201193908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 201193909 . G . PASS END=201193909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 201193910 . T . PASS END=201193910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 201193911 . G . PASS END=201193924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1105:0,90,255:31,0 chr1 201193925 . A . PASS END=201193932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,76,255:27,0 chr1 201193933 . C . PASS END=201193956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 201193957 . C . PASS END=201193965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr1 201193966 . A . PASS END=201193966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 201193967 . A . PASS END=201193981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 201193982 . G . PASS END=201194002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:23:8:0,23,266:0,23,255:9,0 chr1 201194952 . C . PASS END=201194953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 201194954 . T . PASS END=201194954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 201194955 . G . PASS END=201194966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr1 201194967 . C . PASS END=201194967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:11,0 chr1 201194968 . T . PASS END=201194968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 201194969 . G . PASS END=201194969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 201194970 . G . PASS END=201194978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr1 201194979 . A . PASS END=201195014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:15,0 chr1 201195015 . A . PASS END=201195023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201195024 . C . PASS END=201195024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201195025 . C . PASS END=201195026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 201195027 . C . PASS END=201195081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:18,0 chr1 201195082 . A . PASS END=201195091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 201195092 . C . PASS END=201195095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:22,0 chr1 201195096 . G . PASS END=201195096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 201195097 . G . PASS END=201195098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 201195099 . A . PASS END=201195099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr1 201195100 . C . PASS END=201195102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 201195103 . G . PASS END=201195114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr1 201195115 . C . PASS END=201195116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201195117 . T . PASS END=201195118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201195119 . C T, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=1.992;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,13,0:0.619,0.000:21:4,4,0:4,9,0:47:85,0,47,463,286,749:255,0,225:8,0:5.0000e+01,8.3095e-05,5.0392e+01,4.5000e+02,3.2093e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,7,6:4,4,8,5 chr1 201195120 . A . PASS END=201195120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201195121 . C . PASS END=201195125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 201195126 . A . PASS END=201195136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201195137 . C . PASS END=201195156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 201195157 . C . PASS END=201195166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 201195167 . C . PASS END=201195168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201195169 . C . PASS END=201195169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201195170 . T . PASS END=201195170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:19,0 chr1 201195171 . T . PASS END=201195193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr1 201195194 . C . PASS END=201195211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 201195212 . T . PASS END=201195212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:17,0 chr1 201195213 . C . PASS END=201195229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 201195230 . T . LowGQ END=201195230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,543:1,0,255:15,0 chr1 201195231 . G . PASS END=201195231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 201195232 . G . PASS END=201195232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 201195233 . T . PASS END=201195251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr1 201196010 . A . PASS END=201196018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 201196019 . C . PASS END=201196026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 201196027 . G . PASS END=201196027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 201196028 . C . PASS END=201196035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 201196036 . T . PASS END=201196036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 201196037 . A . PASS END=201196113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,643:0,41,255:19,0 chr1 201196114 . T . PASS END=201196114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 201196115 . G . PASS END=201196131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 201196132 . G . PASS END=201196132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 201196133 . T . PASS END=201196133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 201196134 . G . PASS END=201196143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 201196144 . C . PASS END=201196185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr1 201196186 . G . PASS END=201196186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 201196187 . A . PASS END=201196200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 201196201 . G . PASS END=201196202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,54,255:12,0 chr1 201196203 . G . PASS END=201196227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:17,0 chr1 201196228 . T . PASS END=201196228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 201196229 . G . PASS END=201196241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr1 201196242 . C . PASS END=201196246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201196247 . G . PASS END=201196302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,621:0,48,255:19,0 chr1 201196303 . C . PASS END=201196303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 201196304 . A . PASS END=201196308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 201196309 . G . PASS END=201196310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 201196311 . C . PASS END=201196311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201196312 . A . PASS END=201196312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 201196313 . G . PASS END=201196336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 201197514 . A . PASS END=201197516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201197517 . C . PASS END=201197517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 201197518 . C . PASS END=201197518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201197519 . A . PASS END=201197522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:27,0 chr1 201197523 . C . PASS END=201197523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,935:0,56,255:25,0 chr1 201197524 . C . PASS END=201197527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201252596 . G . PASS END=201252596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 201252735 . G . PASS END=201252735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201252831 . A . PASS END=201252841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,994:0,98,255:33,0 chr1 201252842 . G . PASS END=201252842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 201252843 . C . PASS END=201252850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,105,255:30,0 chr1 201252851 . G . PASS END=201252851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:29,0 chr1 201252852 . A . PASS END=201252865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,92,255:32,0 chr1 201252866 . C . PASS END=201252866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 201252867 . G . PASS END=201253003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1065:0,85,255:36,0 chr1 201253004 . G . PASS END=201253019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 201253020 . C . PASS END=201253032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,50,255:18,0 chr1 201263070 . G . PASS END=201263173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:36:0,96,1327:0,108,255:40,0 chr1 201282294 . A . PASS END=201282297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,638:0,57,255:19,0 chr1 201282298 . A . PASS END=201282320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,886:0,63,255:26,0 chr1 201282321 . C . PASS END=201282343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:30,0 chr1 201282344 . C . PASS END=201282346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201282347 . C . PASS END=201282350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201282351 . C . PASS END=201282352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 201282353 . G . PASS END=201282414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1117:0,80,255:34,0 chr1 201282415 . A . PASS END=201282415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 201282416 . C . PASS END=201282423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 201282424 . T . PASS END=201282424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr1 201282425 . C . PASS END=201282432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 201282433 . A . PASS END=201282433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 201282434 . A . PASS END=201282439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 201282440 . G . PASS END=201282454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 201282455 . G . PASS END=201282455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr1 201282456 . C . PASS END=201282482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,71,255:26,0 chr1 201282483 . A . PASS END=201282485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201282486 . C . PASS END=201282498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr1 201282499 . C . PASS END=201282500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201282501 . C . PASS END=201282540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 201282541 . G . PASS END=201282544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 201282545 . T . PASS END=201282545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 201282546 . T . PASS END=201282547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 201282548 . C . PASS END=201282548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 201282549 . A . PASS END=201282562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201282563 . T . PASS END=201282564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 201282565 . A . PASS END=201282572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1086:0,84,255:29,0 chr1 201282573 . A . PASS END=201282573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 201282574 . T . PASS END=201282594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1097:0,83,255:32,0 chr1 201282595 . C . PASS END=201282595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:27,0 chr1 201282596 . G . PASS END=201282620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1133:0,80,255:31,0 chr1 201282621 . C . PASS END=201282666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 201282667 . G . PASS END=201282667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:20,0 chr1 201282668 . C . PASS END=201282683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,658:0,46,255:19,0 chr1 201282684 . T . PASS END=201282684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 201282685 . C . PASS END=201282688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 201285681 . G . PASS END=201285687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1170:0,93,255:34,0 chr1 201285688 . A . PASS END=201285688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr1 201285689 . G . PASS END=201285721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1235:0,86,255:40,0 chr1 201285722 . C . PASS END=201285758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,134,255:40,0 chr1 201285759 . A G, 49.97 PASS DP=53;MQ=250.00;MQRankSum=6.236;ReadPosRankSum=4.991;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,26,0:0.491,0.000:53:12,10,0:15,16,0:48:85,0,50,922,966,1888:255,0,255:26,0:4.9970e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,15,15,11:17,10,13,13 chr1 201285760 . T . PASS END=201285796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:39:0,108,1620:0,111,255:40,0 chr1 201285797 . G . PASS END=201285818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,108,255:37,0 chr1 201285819 . G . PASS END=201285819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:27,0 chr1 201285820 . C . PASS END=201285822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:29,0 chr1 201285823 . C . PASS END=201285825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:26,0 chr1 201286700 . G . PASS END=201286715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 201286716 . G . PASS END=201286724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:13,0 chr1 201286725 . A . PASS END=201286733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 201286734 . A . PASS END=201286750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:19,0 chr1 201286751 . A . PASS END=201286751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 201286752 . A . PASS END=201286752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201286753 . C . PASS END=201286755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201286756 . G . PASS END=201286757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201286758 . A . PASS END=201286770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 201286771 . C T, 45.69 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=1.217;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,9,0:0.360,0.000:25:9,6,0:7,3,0:45:80,0,50,320,572,892:255,0,255:15,0:4.5687e+01,1.3901e-04,5.3000e+01,3.1957e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,3,6:8,8,6,3 chr1 201286772 . G . PASS END=201286784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1008:0,68,255:25,0 chr1 201286785 . T . PASS END=201286785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:22,0 chr1 201286786 . G . PASS END=201286788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 201286789 . C . PASS END=201286796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 201286797 . T . PASS END=201286797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 201286798 . G . PASS END=201286798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201286799 . T . PASS END=201286799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201286800 . T . PASS END=201286805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201286806 . G . PASS END=201286806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201286807 . C . PASS END=201286807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr1 201286808 . A . PASS END=201286808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201286809 . C . PASS END=201286818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,818:0,64,255:26,0 chr1 201286819 . G . PASS END=201286822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 201286823 . G . PASS END=201286823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 201286824 . A . PASS END=201286831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 201286832 . A . PASS END=201286842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr1 201286843 . G . PASS END=201286843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 201286844 . A . PASS END=201286850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201286851 . A . PASS END=201286857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 201286858 . C . PASS END=201286863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 201286864 . C . PASS END=201286864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 201286865 . C . PASS END=201286881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,817:0,61,255:25,0 chr1 201286882 . C . PASS END=201286882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 201286883 . G . PASS END=201286899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 201286900 . G . PASS END=201286900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 201286901 . C . PASS END=201286901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 201286902 . T . PASS END=201286902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 201286903 . G . PASS END=201286904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 201286905 . C . PASS END=201286907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 201287746 . G . PASS END=201287892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:33:0,81,1172:0,83,255:40,0 chr1 201287893 . A . PASS END=201287923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,900:0,61,255:26,0 chr1 201288944 . A . PASS END=201288954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:35,0 chr1 201288955 . G A, 49.94 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=2.492;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:9,9,0:9,8,0:48:85,0,50,608,644,1252:255,0,255:17,0:4.9935e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,11,6:11,7,7,10 chr1 201288956 . C . PASS END=201288964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,102,1465:0,105,255:38,0 chr1 201288965 . G . PASS END=201288965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr1 201288966 . C . PASS END=201288992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:37,0 chr1 201288993 . A . PASS END=201289006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1395:0,102,255:35,0 chr1 201289393 . A . PASS END=201289393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,781:0,72,255:24,0 chr1 201289395 . G . PASS END=201289401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,842:0,72,255:25,0 chr1 201289402 . A . PASS END=201289402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 201289403 . G . PASS END=201289403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 201289404 . C . PASS END=201289404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr1 201289405 . T . PASS END=201289408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201289409 . C . PASS END=201289409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 201289410 . C . PASS END=201289411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201289412 . A . PASS END=201289412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 201289413 . T . PASS END=201289414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201289415 . C . PASS END=201289415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr1 201289416 . A . PASS END=201289417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201289418 . G . PASS END=201289418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 201289419 . C . PASS END=201289425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:26,0 chr1 201289426 . A . PASS END=201289426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201289427 . C . PASS END=201289427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr1 201289428 . C . PASS END=201289429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201289430 . T . PASS END=201289430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:26,0 chr1 201289431 . G . PASS END=201289431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201289432 . C . PASS END=201289432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 201289433 . G . PASS END=201289434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 201289435 . A . PASS END=201289440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 201289441 . T . PASS END=201289441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr1 201289442 . C . PASS END=201289443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201289444 . G . PASS END=201289444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,947:0,40,255:26,0 chr1 201289445 . G . PASS END=201289447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 201289448 . T . PASS END=201289448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 201289449 . C . PASS END=201289449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201289450 . A . PASS END=201289458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr1 201289459 . C . PASS END=201289463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr1 201289464 . G . PASS END=201289471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:25,0 chr1 201289472 . T . PASS END=201289472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:20,0 chr1 201289473 . C . PASS END=201289478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 201289479 . C . PASS END=201289479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:20,0 chr1 201289480 . T . PASS END=201289496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 201289497 . C . PASS END=201289509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:20:0,53,810:0,53,255:19,0 chr1 201289516 . G . PASS END=201289516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 201291106 . T . PASS END=201291245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,105,1575:0,111,255:40,0 chr1 201291246 . G . PASS END=201291261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,105,1568:0,116,255:40,0 chr1 201292141 . A . PASS END=201292142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:15,0 chr1 201292143 . C . PASS END=201292143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 201292144 . A . PASS END=201292147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 201292148 . A . PASS END=201292148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 201292149 . C . PASS END=201292149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 201292150 . T . PASS END=201292150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 201292151 . A . PASS END=201292188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:27,0 chr1 201292189 . G . PASS END=201292217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1039:0,84,255:32,0 chr1 201292218 . C . PASS END=201292218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:32,0 chr1 201292219 . A . PASS END=201292222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:33,0 chr1 201292223 . G . PASS END=201292223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr1 201292224 . C . PASS END=201292239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 201292240 . A . PASS END=201292240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 201292241 . T . PASS END=201292269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1111:0,80,255:32,0 chr1 201292270 . G . PASS END=201292313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 201292314 . G . PASS END=201292314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr1 201292315 . C . PASS END=201292315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 201292316 . T . PASS END=201292317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:21,0 chr1 201293555 . G . PASS END=201293572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,740:0,63,255:26,0 chr1 201293573 . C . PASS END=201293573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,929:0,42,255:25,0 chr1 201293574 . C . PASS END=201293577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,929:0,75,255:26,0 chr1 201293578 . T . PASS END=201293643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:31,0 chr1 201293644 . T . PASS END=201293668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,845:0,66,255:26,0 chr1 201293669 . G . PASS END=201293683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 201293684 . C . PASS END=201293687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 201293688 . C . PASS END=201293700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:18,0 chr1 201293701 . G . PASS END=201293709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr1 201294069 . G . PASS END=201294069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 201294070 . G . PASS END=201294080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,908:0,61,255:26,0 chr1 201294081 . T . PASS END=201294092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 201294093 . C . PASS END=201294108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 201294109 . C . PASS END=201294112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 201294113 . A . PASS END=201294122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201294123 . C . PASS END=201294126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 201294127 . C . PASS END=201294133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 201294134 . G . PASS END=201294134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201294135 . A . PASS END=201294140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:27:0,71,1053:0,71,255:26,0 chr1 201294141 . T . PASS END=201294149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 201294150 . C . PASS END=201294150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 201294151 . G . PASS END=201294151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 201294152 . G . PASS END=201294152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 201294153 . C . PASS END=201294153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 201294154 . C . PASS END=201294156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 201294157 . C . PASS END=201294227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,537:0,41,255:19,0 chr1 201294228 . A . PASS END=201294234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 201294235 . C . PASS END=201294235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 201294236 . A . PASS END=201294238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 201294239 . A . PASS END=201294244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:9,0 chr1 201294245 . T . PASS END=201294256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:13:7:0,13,225:0,13,241:6,0 chr1 201294882 . T . PASS END=201294962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:37:0,93,1395:0,96,255:40,0 chr1 201294963 . A . PASS END=201294966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:34:0,75,1125:0,102,255:26,0 chr1 201297890 . C . PASS END=201297964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,114,1756:0,114,255:40,0 chr1 201299225 . C . PASS END=201299225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 201299232 . G . PASS END=201299232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 201299336 . A . LowGQ END=201299336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,258:42,0,255:10,1 chr1 201299390 . C . PASS END=201299390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 201299391 . G . PASS END=201299391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 201299393 . T G, 49.83 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=1.791;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,6,0:0.462,0.000:13:3,3,0:4,3,0:48:85,0,50,203,250,453:221,0,229:7,0:4.9831e+01,6.6786e-05,5.3000e+01,2.0251e+02,2.8502e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,3,3:4,3,4,2 chr1 201299489 . G . PASS END=201299489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 201299498 . C . PASS END=201299498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 201299518 . A . PASS END=201299518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,111,1665:0,115,255:37,0 chr1 201299586 . G . PASS END=201299586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 201299616 . A . PASS END=201299616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 201299617 . T . PASS END=201299617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201299813 . G . PASS END=201299813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 201299842 . G . PASS END=201299842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 201299882 . T . PASS END=201299882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 201299910 . G . PASS END=201299910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr1 201300030 . A . PASS END=201300030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201300063 . T . PASS END=201300063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 201300102 . A . PASS END=201300102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr1 201300201 . C . PASS END=201300201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 201300209 . G . PASS END=201300209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 201300233 . G . PASS END=201300233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 201300301 . T . PASS END=201300301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 201300366 . C . PASS END=201300366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201300372 . C . PASS END=201300372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201300398 . C . PASS END=201300398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201300578 . C . PASS END=201300578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 201300612 . G . PASS END=201300612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 201300667 . A . PASS END=201300667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr1 201300685 . T . PASS END=201300685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201300727 . C . PASS END=201300727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 201300734 . C . PASS END=201300734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 201300773 . C . PASS END=201300773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 201300812 . C . PASS END=201300812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 201300885 . C . PASS END=201300885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201300899 . G . PASS END=201300899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201300981 . G . PASS END=201300981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 201301450 . C . PASS END=201301450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 201301577 . A . PASS END=201301577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 201301629 . C . PASS END=201301629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 201301670 . C . PASS END=201301670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 201301712 . C . PASS END=201301712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 201301728 . A . PASS END=201301728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 201301737 . G . PASS END=201301737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 201301760 . G . PASS END=201301760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 201301792 . C . PASS END=201301792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 201301947 . C . PASS END=201301947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 201301974 . C . PASS END=201301974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 201302027 . C . PASS END=201302028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 201328163 . T . PASS END=201328175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 201328176 . G . PASS END=201328178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 201328179 . G . PASS END=201328179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 201328180 . G . PASS END=201328185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 201328186 . G . PASS END=201328189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 201328190 . A . PASS END=201328197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201328198 . G . PASS END=201328201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr1 201328202 . T . PASS END=201328202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 201328203 . G . PASS END=201328209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 201328210 . A . PASS END=201328215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 201328216 . G . PASS END=201328216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 201328217 . C . PASS END=201328237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:19,0 chr1 201328238 . G . PASS END=201328246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 201328247 . T . PASS END=201328247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 201328248 . G . PASS END=201328256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 201328257 . A . PASS END=201328258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr1 201328259 . G . PASS END=201328259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 201328260 . A . PASS END=201328264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201328265 . C . PASS END=201328267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201328268 . G . PASS END=201328268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 201328269 . G . PASS END=201328285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:26,0 chr1 201328286 . G . PASS END=201328287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201328288 . C . PASS END=201328290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201328291 . A . PASS END=201328318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:29,0 chr1 201328319 . T . PASS END=201328322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201328323 . G . PASS END=201328327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201328328 . A . PASS END=201328328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr1 201328329 . G . PASS END=201328354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1172:0,83,255:31,0 chr1 201328355 . T . PASS END=201328355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201328356 . G . PASS END=201328371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 201328372 . C . PASS END=201328372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr1 201328373 . G . PASS END=201328373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201328374 . G . PASS END=201328376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,882:0,73,255:26,0 chr1 201328377 . C . PASS END=201328378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201328379 . T . PASS END=201328386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 201328746 . C . PASS END=201328746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 201328750 . C . PASS END=201328792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,157,255:40,0 chr1 201330342 . C . PASS END=201330497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:45:0,99,1653:0,99,255:40,0 chr1 201330499 . T . PASS END=201330499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:97:45:0,97,1605:0,97,255:37,0 chr1 201330501 . C . PASS END=201330504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:91:43:0,91,1574:0,91,255:37,0 chr1 201330506 . G . PASS END=201330507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:82:40:0,82,1451:0,82,255:33,0 chr1 201331032 . A . PASS END=201331032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 201331036 . C . PASS END=201331036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 201331038 . C . PASS END=201331039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 201331041 . C . PASS END=201331162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,138,255:40,0 chr1 201331165 . A . PASS END=201331165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,163,255:40,0 chr1 201331511 . C . PASS END=201331512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,152,255:40,0 chr1 201331514 . C . PASS END=201331523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,147,255:40,0 chr1 201331529 . C . PASS END=201331530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr1 201332419 . C . PASS END=201332419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 201332424 . C . PASS END=201332535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,117,1800:0,117,255:40,2 chr1 201332603 . G . PASS END=201332603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 201333421 . C . PASS END=201333421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 201333426 . A . PASS END=201333456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:46:16:0,46,604:0,46,255:19,0 chr1 201333457 . T . PASS END=201333457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201333458 . C . PASS END=201333458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201333459 . A . PASS END=201333470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 201333471 . C . PASS END=201333478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 201333479 . C . PASS END=201333479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:14,0 chr1 201333480 . G . PASS END=201333503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 201334313 . A . PASS END=201334313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:25,0 chr1 201334318 . C . PASS END=201334431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1150:0,90,255:40,0 chr1 201334432 . T . PASS END=201334434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 201334435 . C . PASS END=201334435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 201334438 . G . PASS END=201334438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 201334732 . G . PASS END=201334732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 201334738 . A . PASS END=201334798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,169,255:40,0 chr1 201334800 . T . PASS END=201334800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 201335957 . C . PASS END=201335957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1227:0,99,255:33,0 chr1 201335960 . A . PASS END=201335960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr1 201335966 . C . PASS END=201335999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1203:0,95,255:38,0 chr1 201336003 . G . PASS END=201336003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 201336010 . T . PASS END=201336010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 201336890 . T . PASS END=201336890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr1 201336899 . C . PASS END=201336934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,195,255:40,0 chr1 201337285 . C . PASS END=201337285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr1 201337289 . C . PASS END=201337323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1127:0,85,255:33,0 chr1 201337324 . T . PASS END=201337324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 201337325 . T . PASS END=201337327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201337328 . G . PASS END=201337349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 201337350 . C . PASS END=201337350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:19,0 chr1 201337351 . C . PASS END=201337355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201337359 . G . PASS END=201337359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 201338944 . C . PASS END=201338973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1289:0,96,255:37,0 chr1 201341143 . T . PASS END=201341143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1488:0,104,255:38,0 chr1 201341155 . C . PASS END=201341219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1274:0,84,255:40,0 chr1 201341220 . A . PASS END=201341220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1348:0,73,255:35,0 chr1 201341221 . G . PASS END=201341270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1305:0,97,255:38,0 chr1 201341271 . A . PASS END=201341276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,99,255:26,0 chr1 201341277 . C . PASS END=201341279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 201341280 . C . PASS END=201341280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 201341281 . T . PASS END=201341281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr1 201341282 . C . PASS END=201341282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201341283 . C . PASS END=201341283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 201342325 . A . PASS END=201342335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,111,1665:0,114,255:40,0 chr1 201342336 . A . PASS END=201342336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1189:0,59,255:36,0 chr1 201342337 . C . PASS END=201342339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1349:0,87,255:40,0 chr1 201342342 . T . PASS END=201342381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,101,1383:0,101,255:39,0 chr1 201342382 . T . PASS END=201342382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1327:0,70,255:34,0 chr1 201346758 . C . PASS END=201346758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 201351016 . T . PASS END=201351021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:23,0 chr1 201351380 . C . PASS END=201351381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 201351382 . C . PASS END=201351382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 201351383 . A . PASS END=201351389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 201351390 . A . PASS END=201351390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 201351391 . G . PASS END=201351416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:31:0,88,1141:0,88,255:36,0 chr1 201351417 . T . PASS END=201351417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1224:0,61,255:32,0 chr1 201351418 . G . PASS END=201351454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1150:0,85,255:34,0 chr1 201351781 . C . PASS END=201351781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 201351782 . T . PASS END=201351782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 201351783 . G . PASS END=201351785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 201351786 . G . PASS END=201351786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 201351787 . G . PASS END=201351787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 201351788 . T . PASS END=201351788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 201351789 . C . PASS END=201351799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1141:0,93,255:32,0 chr1 201351800 . G . PASS END=201351800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 201351801 . A . PASS END=201351810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:30,0 chr1 201351811 . C . PASS END=201351811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:30,0 chr1 201351812 . C . PASS END=201351830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 201351831 . G . PASS END=201351832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 201351833 . C . PASS END=201351833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201351834 . T . PASS END=201351834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,983:0,76,255:28,0 chr1 201351835 . T . PASS END=201351837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 201351838 . T . PASS END=201351867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,955:0,74,255:26,0 chr1 201352202 . C . PASS END=201352207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,607:0,48,255:17,0 chr1 201352208 . G . PASS END=201352208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr1 201352209 . C . PASS END=201352218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,613:0,51,255:19,0 chr1 201352219 . G . PASS END=201352227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 201352228 . G . PASS END=201352228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:17,0 chr1 201352229 . G . PASS END=201352243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 201352244 . T . PASS END=201352244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 201352245 . T . PASS END=201352269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:25,0 chr1 201352270 . T . PASS END=201352270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 201352271 . G . PASS END=201352284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 201352285 . G . PASS END=201352285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 201352286 . A . PASS END=201352294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 201352295 . T . PASS END=201352295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 201352296 . A . PASS END=201352296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 201352297 . A . PASS END=201352322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,68,255:26,0 chr1 201352323 . T . PASS END=201352329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,800:0,55,255:19,0 chr1 201352330 . A . PASS END=201352331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 201352332 . T . PASS END=201352332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:20,0 chr1 201352333 . C . PASS END=201352333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 201352334 . T . PASS END=201352339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 201352445 . C . PASS END=201352449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 201352450 . T . PASS END=201352450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 201352451 . G . PASS END=201352452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 201352453 . C . PASS END=201352453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 201352454 . C . PASS END=201352466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1138:0,86,255:34,0 chr1 201352467 . T . PASS END=201352467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,1045:0,36,255:29,0 chr1 201352468 . C . PASS END=201352515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1127:0,83,255:33,0 chr1 201352516 . C . PASS END=201352516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 201352517 . A . PASS END=201352517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 201353920 . C . PASS END=201353963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,119,1657:0,119,255:40,0 chr1 201354829 . C . PASS END=201354933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,100,1800:0,100,255:40,0 chr1 201355463 . C . PASS END=201355463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 201355464 . T . PASS END=201355475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr1 201355476 . G . PASS END=201355476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 201355477 . G . PASS END=201355479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 201355480 . G . PASS END=201355484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 201355485 . C . PASS END=201355489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201355490 . G . PASS END=201355494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr1 201355495 . C . PASS END=201355495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 201355496 . A . PASS END=201355504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr1 201355505 . G . PASS END=201355521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 201355522 . T C, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,8,0:0,15,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,9:0,0,9,14 chr1 201355523 . T . PASS END=201355547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,824:0,61,255:26,0 chr1 201355548 . G . PASS END=201355550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 201355551 . A . PASS END=201355551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:26,0 chr1 201355552 . G . PASS END=201355559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 201355560 . C . PASS END=201355564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:27,0 chr1 201355565 . C . PASS END=201355565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 201355566 . T . PASS END=201355567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 201355568 . C . PASS END=201355569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201355570 . C . PASS END=201355573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201355574 . G . PASS END=201355574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 201355575 . G . PASS END=201355575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201355576 . T . PASS END=201355579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 201355580 . G . PASS END=201355583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201355584 . G . PASS END=201355587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:27,0 chr1 201355588 . T . PASS END=201355588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201355589 . T . PASS END=201355591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,984:0,68,255:28,0 chr1 201355592 . C . PASS END=201355592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 201355593 . C . PASS END=201355593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 201355594 . C . PASS END=201355595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 201355596 . G . PASS END=201355596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 201355597 . A . PASS END=201355597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201355598 . G . PASS END=201355598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 201355599 . G . PASS END=201355615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:34,0 chr1 201355616 . C . PASS END=201355652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1324:0,87,255:35,0 chr1 201355653 . G T, 49.35 PASS DP=39;MQ=249.60;MQRankSum=5.310;ReadPosRankSum=2.465;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,18,0:0.462,0.000:39:8,5,0:13,13,0:48:84,0,50,586,748,1334:255,0,255:18,0:4.9350e+01,7.2222e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,6,11,7:12,9,8,10 chr1 201355654 . G . PASS END=201355657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1466:0,117,255:39,0 chr1 201355658 . A . PASS END=201355658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 201355659 . G . PASS END=201355690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:39:0,82,1329:0,82,255:39,0 chr1 201355691 . T . PASS END=201355723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:38:0,103,1352:0,103,255:40,0 chr1 201355724 . C . PASS END=201355753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,107,1607:0,107,255:40,0 chr1 201355754 . T . PASS END=201355754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1476:0,77,255:38,0 chr1 201355755 . G . PASS END=201355760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,117,1613:0,119,255:40,0 chr1 201355761 . A G, 49.95 PASS DP=43;MQ=250.00;MQRankSum=5.600;ReadPosRankSum=3.972;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,21,0:0.488,0.000:43:11,11,0:11,10,0:48:85,0,50,722,758,1480:255,0,255:19,0:4.9953e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,18,3:13,9,12,9 chr1 201355762 . G . PASS END=201355775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1582:0,113,255:40,0 chr1 201355776 . A . PASS END=201355776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1371:0,60,255:38,0 chr1 201355777 . C . PASS END=201355798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,116,1582:0,116,255:40,0 chr1 201355799 . C . PASS END=201355905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,108,1623:0,108,255:40,0 chr1 201355906 . G . PASS END=201355942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,129,255:40,0 chr1 201355943 . C T, 200.49 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,25,0:0,26,0:150:238,153,0,1953,153,1953:255,153,0:0,0:2.0049e+02,1.5049e+02,0.0000e+00,4.5000e+02,1.8526e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,25:0,0,28,23 chr1 201355944 . T . PASS END=201355980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1558:0,115,255:40,0 chr1 201355981 . T . PASS END=201356039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1105:0,89,255:40,0 chr1 201356040 . T . PASS END=201356040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,956:0,38,255:29,0 chr1 201356041 . G . PASS END=201356052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 201356053 . G . PASS END=201356056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1076:0,74,255:26,0 chr1 201356057 . C . PASS END=201356064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 201356065 . G . PASS END=201356065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 201356066 . T . PASS END=201356069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201356070 . A . PASS END=201356071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 201356072 . T . PASS END=201356075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201356076 . A . PASS END=201356076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 201356077 . G . PASS END=201356085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 201356086 . T . PASS END=201356086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201356087 . G . PASS END=201356105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 201356106 . G . PASS END=201356107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 201356108 . G . PASS END=201356127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:31,0 chr1 201356128 . T . PASS END=201356128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201356129 . G . PASS END=201356129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201356130 . T . PASS END=201356130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 201356131 . T . PASS END=201356154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:31,0 chr1 201356155 . T . PASS END=201356155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:30,0 chr1 201356156 . C . PASS END=201356246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1233:0,86,255:36,0 chr1 201356247 . T . PASS END=201356249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 201356250 . T . PASS END=201356252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 201356253 . T . PASS END=201356258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 201356259 . G . PASS END=201356287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:31,0 chr1 201356288 . T . PASS END=201356306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,876:0,61,255:26,0 chr1 201358288 . C . PASS END=201358300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 201358301 . A . PASS END=201358318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr1 201358319 . T . PASS END=201358319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 201358320 . C . PASS END=201358323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 201358324 . C . PASS END=201358325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201358326 . G . PASS END=201358350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:17,0 chr1 201358351 . G . PASS END=201358356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 201358357 . C . PASS END=201358357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 201358358 . T . PASS END=201358360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 201358361 . G . PASS END=201358361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201358362 . G . PASS END=201358367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 201358368 . G . PASS END=201358371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201358372 . C . PASS END=201358403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 201358404 . A . PASS END=201358421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:18,0 chr1 201358422 . C . PASS END=201358422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:16,0 chr1 201358423 . C . PASS END=201358431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 201360206 . C . PASS END=201360227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,463:0,45,255:17,0 chr1 201360228 . G . PASS END=201360228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 201360229 . C . PASS END=201360243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr1 201360244 . C . PASS END=201360262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 201360263 . C . PASS END=201360280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr1 201360281 . A G, 50.00 PASS DP=12;MQ=245.16;MQRankSum=1.849;ReadPosRankSum=1.294;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,9,0:0.750,0.000:12:0,5,0:3,4,0:39:85,0,37,322,107,429:255,0,80:3,0:5.0000e+01,4.9160e-04,3.9864e+01,3.2191e+02,1.4207e+02,4.3220e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,3,4,5:3,0,4,5 chr1 201360282 . A . PASS END=201360284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 201360285 . A . PASS END=201360285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr1 201360286 . G . PASS END=201360289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 201360290 . C . PASS END=201360290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 201360291 . G . PASS END=201360293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 201360294 . G . PASS END=201360294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 201360295 . A . PASS END=201360304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:10:0,20,315:0,20,255:10,0 chr1 201360305 . G . PASS END=201360309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 201366356 . A . PASS END=201366404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1296:0,89,255:39,0 chr1 201366405 . G . PASS END=201366405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 201366406 . G . PASS END=201366444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1305:0,84,255:40,0 chr1 201368397 . C . PASS END=201368397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201368398 . T . PASS END=201368398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:19,0 chr1 201368399 . G . PASS END=201368412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 201368413 . A . PASS END=201368414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 201368415 . T . PASS END=201368415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 201368416 . C . PASS END=201368416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 201368417 . C . PASS END=201368420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 201368421 . C . PASS END=201368431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,55,255:18,0 chr1 201368432 . C . PASS END=201368432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr1 201368433 . A . PASS END=201368433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:14,0 chr1 201368434 . T . PASS END=201368434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:39:24:0,39,585:0,55,255:13,0 chr1 201368538 . C . PASS END=201368558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 201368559 . T . PASS END=201368571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:20:0,49,729:0,49,255:19,0 chr1 201368572 . C . PASS END=201368580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 201368581 . G . PASS END=201368584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 201368585 . T . PASS END=201368585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:16,0 chr1 201368586 . C . PASS END=201368612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,645:0,43,255:19,0 chr1 201368613 . C . PASS END=201368613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 201368614 . G . PASS END=201368617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 201369006 . C . PASS END=201369012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 201369013 . C . PASS END=201369017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 201369018 . T . PASS END=201369018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 201369019 . C . PASS END=201369026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 201369027 . G . PASS END=201369027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 201369028 . C . PASS END=201369043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 201379456 . C . PASS END=201379460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:25,0 chr1 201379461 . G . PASS END=201379461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:24,0 chr1 201379462 . T . PASS END=201379463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:26,0 chr1 201379464 . A . PASS END=201379526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:27:0,80,1024:0,80,255:37,0 chr1 201379527 . C . PASS END=201379527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:36,0 chr1 201379528 . G . PASS END=201379546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:37,0 chr1 201379547 . A . PASS END=201379563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,945:0,81,255:26,0 chr1 201380485 . C . PASS END=201380496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:19,0 chr1 201380497 . T . PASS END=201380510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:22,0 chr1 201380511 . A . PASS END=201380511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 201380512 . C . PASS END=201380530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,786:0,66,255:26,0 chr1 201380531 . T . PASS END=201380532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 201380533 . C . PASS END=201380533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 201380534 . A . PASS END=201380545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201380546 . T . PASS END=201380546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:27,0 chr1 201380547 . G . PASS END=201380556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 201380557 . C . PASS END=201380557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 201380558 . A . PASS END=201380567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 201380568 . G . PASS END=201380568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr1 201380569 . G . PASS END=201380631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1217:0,93,255:34,0 chr1 201380632 . G . PASS END=201380632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 201380633 . T . PASS END=201380634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201380635 . C . PASS END=201380635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:26,0 chr1 201380636 . A . PASS END=201380636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201380637 . T . PASS END=201380657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,945:0,65,255:26,0 chr1 201380658 . T . PASS END=201380661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr1 201382160 . C . PASS END=201382249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1025:0,81,255:36,0 chr1 201383646 . C . PASS END=201383667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,792:0,63,255:26,0 chr1 201383668 . C . PASS END=201383680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1162:0,80,255:32,0 chr1 201383681 . G . PASS END=201383749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1218:0,86,255:34,0 chr1 201383750 . A . PASS END=201383776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr1 201383777 . T . PASS END=201383777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 201384341 . C . PASS END=201384386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:34:0,89,1217:0,89,255:40,0 chr1 201386244 . C . PASS END=201386247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 201386911 . A . PASS END=201386921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1575:0,111,255:36,0 chr1 201437531 . T . PASS END=201437533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 201437534 . G . PASS END=201437535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 201437536 . A . PASS END=201437542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201437543 . G . PASS END=201437571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:17,0 chr1 201437572 . G . PASS END=201437572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 201437573 . C . PASS END=201437581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:18,0 chr1 201437582 . G . PASS END=201437582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 201437583 . A . PASS END=201437583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 201437584 . T . PASS END=201437584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 201437585 . G . PASS END=201437594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:19,0 chr1 201437595 . T . PASS END=201437595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 201437596 . T . PASS END=201437622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr1 201437623 . T . PASS END=201437626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 201437627 . G . PASS END=201437630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201437631 . T . PASS END=201437631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 201437632 . T . PASS END=201437641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 201437642 . A . PASS END=201437642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 201437643 . T . PASS END=201437648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 201437649 . A . PASS END=201437649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 201437650 . G . PASS END=201437666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 201437667 . A . PASS END=201437689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 201437690 . C . PASS END=201437702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 201437703 . A . PASS END=201437715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 201437716 . T . PASS END=201437717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201437718 . C . PASS END=201437748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 201437749 . C . PASS END=201437750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 201437751 . A . PASS END=201437773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 201437774 . G . PASS END=201437838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:17,0 chr1 201437839 . A . PASS END=201437867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 201437868 . T . PASS END=201437868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 201437869 . C . PASS END=201437869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201437870 . C . PASS END=201437872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 201437873 . C . PASS END=201437905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 201437906 . C . PASS END=201437914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 201453118 . T . PASS END=201453186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,156,255:40,0 chr1 201453841 . T . PASS END=201453852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 201453853 . G . PASS END=201453917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,799:0,63,255:24,0 chr1 201454411 . C . PASS END=201454411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 201454412 . T . PASS END=201454412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,961:0,79,255:30,0 chr1 201454413 . T . PASS END=201454422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr1 201454423 . T . PASS END=201454475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1077:0,80,255:35,0 chr1 201454476 . G . PASS END=201454476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 201454477 . C . PASS END=201454497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr1 201454498 . G . PASS END=201454504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,73,255:26,0 chr1 201457983 . C . PASS END=201457984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 201457985 . T . PASS END=201457985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 201457986 . C . PASS END=201457989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 201457990 . G . PASS END=201457990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 201457991 . C . PASS END=201458002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 201458003 . T . PASS END=201458003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,814:0,67,255:27,0 chr1 201458004 . C . PASS END=201458112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:28:0,80,1055:0,80,255:40,0 chr1 201459304 . T . PASS END=201459309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201459310 . T . PASS END=201459310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 201459311 . G . PASS END=201459312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 201459313 . T . PASS END=201459314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 201459315 . G . PASS END=201459436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1178:0,83,255:40,0 chr1 201459437 . C . PASS END=201459439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:22,0 chr1 201459440 . C . PASS END=201459442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:48:35:0,48,720:0,105,255:18,0 chr1 201459443 . T . PASS END=201459443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:39:35:0,39,585:0,105,255:13,0 chr1 201459444 . G . PASS END=201459466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 201459467 . A . PASS END=201459470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 201459471 . C . PASS END=201459472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 201465320 . T . PASS END=201465431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1250:0,81,255:40,0 chr1 201476011 . A . PASS END=201476014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 201476015 . G . PASS END=201476023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:23,0 chr1 201476024 . T . PASS END=201476024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 201476025 . A . PASS END=201476039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:25,0 chr1 201476040 . G . PASS END=201476044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 201476045 . G . PASS END=201476045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 201476046 . C . PASS END=201476057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr1 201476058 . T . PASS END=201476058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr1 201476059 . A . PASS END=201476059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 201476060 . A . PASS END=201476060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 201476061 . C . PASS END=201476078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1040:0,87,255:29,0 chr1 201476079 . G . PASS END=201476079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 201476080 . T . PASS END=201476092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 201476093 . A . PASS END=201476093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 201476094 . C . PASS END=201476095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 201476096 . G . PASS END=201476096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 201476097 . C . PASS END=201476098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201476099 . C . PASS END=201476125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,930:0,72,255:26,0 chr1 201476126 . C . PASS END=201476126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 201476127 . G . PASS END=201476148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,892:0,69,255:25,0 chr1 201476149 . A . PASS END=201476176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:16:0,42,630:0,48,255:21,0 chr1 201476177 . C . PASS END=201476180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 201476181 . A . PASS END=201476189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 201476190 . G . PASS END=201476190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr1 201476191 . C . PASS END=201476193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 201476194 . T . PASS END=201476241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 201476242 . A . PASS END=201476242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 201476243 . G . PASS END=201476245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 201476246 . G . PASS END=201476250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201476251 . T . PASS END=201476287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:9,0 chr1 201476288 . C . PASS END=201476296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 201476297 . C . LowGQ END=201476297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,78:70,0,148:5,0 chr1 201476298 . G . PASS END=201476298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 201476299 . T . LowGQ END=201476299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,4:8:0:8:0,0,37:87,0,123:4,0 chr1 201476300 . G . PASS END=201476300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 201476301 . T . LowGQ END=201476304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,45:23,0,131:5,0 chr1 201476305 . G . PASS END=201476306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:8:0,10,225:0,10,247:5,0 chr1 201476307 . G . PASS END=201476307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 201476308 . C . LowGQ END=201476308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,172:51,0,222:7,0 chr1 201476309 . C . PASS END=201476309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 201476310 . A . LowGQ END=201476310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,200:42,0,241:7,0 chr1 201476311 . C . PASS END=201476311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 201476312 . G . PASS END=201476312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 201476313 . C . LowGQ END=201476313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:3,0,255:8,0 chr1 201476314 . C . PASS END=201476314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 201476315 . A . LowGQ END=201476316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,192:42,0,233:7,0 chr1 201476317 . C . PASS END=201476318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 201476319 . A . LowGQ END=201476322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,232:0,0,255:8,0 chr1 201476323 . G . PASS END=201476324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 201476325 . C . PASS END=201476325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 201476326 . T . LowGQ END=201476327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,280:0,0,255:9,0 chr1 201476328 . T . PASS END=201476328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 201476329 . G . PASS END=201476329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 201476330 . C . LowGQ END=201476331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,269:14,0,255:8,0 chr1 201476332 . C . PASS END=201476332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 201476333 . A . PASS END=201476333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,371:0,6,255:10,0 chr1 201476334 . C . PASS END=201476334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 201476335 . T . PASS END=201476336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,465:0,25,255:12,0 chr1 201476337 . C . PASS END=201476345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 201476346 . A . PASS END=201476346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 201476347 . G . PASS END=201476354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr1 201476355 . G . PASS END=201476359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 201476360 . G . PASS END=201476360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 201476361 . G . PASS END=201476365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 201476366 . A . PASS END=201476373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 201476374 . C . PASS END=201476374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 201476375 . G . PASS END=201476376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 201476377 . T . PASS END=201476377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr1 201476378 . G . PASS END=201476395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 201476396 . G . PASS END=201476396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 201476397 . G . PASS END=201476427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 201476428 . G . PASS END=201476435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201476436 . C . PASS END=201476439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:10,0 chr1 201476440 . G . PASS END=201476440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 201476441 . G . PASS END=201476464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr1 201476465 . G . PASS END=201476466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 201476467 . C . PASS END=201476499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr1 201476500 . A . PASS END=201476502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201476503 . G . PASS END=201476503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 201476504 . T . PASS END=201476504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201476505 . C . PASS END=201476510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201476511 . C . PASS END=201476536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:8,0 chr1 201476537 . C . PASS END=201476537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 201476538 . T . PASS END=201476539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 201476540 . T . PASS END=201476541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 201476542 . T . PASS END=201476547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 201483472 . G . PASS END=201483519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,191,255:40,0 chr1 201592013 . A . PASS END=201592024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,939:0,75,255:26,0 chr1 201592025 . G . PASS END=201592033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 201592034 . A . PASS END=201592034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr1 201592035 . A . PASS END=201592038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,979:0,87,255:29,0 chr1 201592039 . C T, 49.93 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=3.382;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:8,7,0:7,7,0:48:85,0,50,493,537,1029:255,0,255:15,0:4.9928e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,8,6:5,10,7,7 chr1 201592040 . G . PASS END=201592040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 201592041 . C . PASS END=201592041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 201592042 . C . PASS END=201592042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201592043 . A . PASS END=201592043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 201592044 . G . PASS END=201592049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 201592050 . C . PASS END=201592050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 201592051 . T . PASS END=201592076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,89,255:36,0 chr1 201592077 . C . PASS END=201592086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1374:0,111,255:37,0 chr1 201592087 . T . PASS END=201592087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:34,0 chr1 201592088 . T . PASS END=201592104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:35,0 chr1 201592105 . T . PASS END=201592105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:25,0 chr1 201592106 . A . PASS END=201592134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,968:0,75,255:26,0 chr1 201592135 . A . PASS END=201592135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:22,0 chr1 201592136 . C . PASS END=201592139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:23,0 chr1 201592140 . A . LowGQ END=201592140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,664:10,0,255:20,0 chr1 201592141 . G . PASS END=201592144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,854:0,61,255:24,0 chr1 201592145 . G . PASS END=201592145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,772:0,58,255:22,0 chr1 201592146 . G . PASS END=201592148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 201592149 . T . PASS END=201592149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,714:0,25,255:20,0 chr1 201592150 . G . PASS END=201592151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 201592152 . C . PASS END=201592152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,730:0,42,255:21,0 chr1 201592153 . C . PASS END=201592154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 201592155 . T . PASS END=201592155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:20,0 chr1 201592156 . G . PASS END=201592156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 201592157 . A . PASS END=201592157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,742:0,22,255:20,0 chr1 201592158 . G . PASS END=201592158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 201592159 . C . PASS END=201592159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 201592160 . C . PASS END=201592161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201592162 . A . PASS END=201592162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 201592163 . C . PASS END=201592163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201592164 . A . PASS END=201592164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr1 201592165 . G . PASS END=201592165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,681:0,19,255:18,0 chr1 201592166 . A . LowGQ END=201592166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,712:0,0,255:19,0 chr1 201592167 . G . PASS END=201592167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:20,0 chr1 201592168 . A . PASS END=201592169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201592170 . C . PASS END=201592171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,731:0,49,255:19,0 chr1 201592172 . G . PASS END=201592172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201592173 . C . PASS END=201592174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 201592175 . T . LowGQ END=201592175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,651:3,0,255:15,0 chr1 201592176 . C . PASS END=201592177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:21:0,51,765:0,52,255:17,0 chr1 201592178 . C . PASS END=201592178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:16,0 chr1 201592179 . C . PASS END=201592180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:16,0 chr1 201592181 . A . PASS END=201592181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,607:0,8,255:14,0 chr1 201592182 . G . PASS END=201592182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:15,0 chr1 201592183 . A . PASS END=201592184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr1 201592185 . T . PASS END=201592185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,513:0,2,255:15,0 chr1 201592186 . G . PASS END=201592186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 201592187 . G . PASS END=201592188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 201592189 . A . LowGQ END=201592189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,527:1,0,255:14,0 chr1 201592190 . A . PASS END=201592191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 201592192 . G . PASS END=201592192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr1 201592193 . G . PASS END=201592196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201592197 . C . PASS END=201592198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:13,0 chr1 201592199 . G . PASS END=201592199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 201592200 . G . PASS END=201592201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,537:0,32,255:14,0 chr1 201592202 . C . PASS END=201592204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 201592205 . T . PASS END=201592205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:15,0 chr1 201592206 . C . PASS END=201592212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,596:0,48,255:16,0 chr1 201592213 . C . PASS END=201592213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 201592214 . T . PASS END=201592214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 201592215 . C . PASS END=201592217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 201592218 . C . PASS END=201592218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 201592219 . T . PASS END=201592242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,529:0,41,255:17,0 chr1 201592243 . C . PASS END=201592243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 201592244 . T . PASS END=201592251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,553:0,45,255:16,0 chr1 201592252 . G . PASS END=201592252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 201592253 . T . PASS END=201592253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:15,0 chr1 201592254 . T . PASS END=201592254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 201592255 . T . PASS END=201592264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,607:0,51,255:17,0 chr1 201592265 . G . PASS END=201592268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,513:0,34,255:13,0 chr1 201592269 . G . LowGQ END=201592269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,471:21,0,255:11,0 chr1 201592270 . G . PASS END=201592276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:14:0,32,540:0,32,255:13,0 chr1 201592277 . G . PASS END=201592278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 201592279 . T . PASS END=201592285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201592286 . G . PASS END=201592289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201592290 . A . PASS END=201592290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201592291 . A . PASS END=201592330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:15,0 chr1 201592331 . C . PASS END=201592331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 201592332 . C . PASS END=201592342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 201592343 . C . PASS END=201592343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201592344 . T . PASS END=201592350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 201592351 . C . PASS END=201592353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201592354 . G . PASS END=201592358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 201592359 . G . PASS END=201592368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201592369 . A . PASS END=201592370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 201592371 . T . PASS END=201592371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 201592372 . T . PASS END=201592383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 201592384 . A . PASS END=201592384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 201592385 . G . PASS END=201592397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 201592398 . A . PASS END=201592398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 201592399 . G . PASS END=201592410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 201592411 . C . PASS END=201592424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 201592425 . C . PASS END=201592433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 201592434 . A . PASS END=201592434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 201592435 . G . PASS END=201592437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 201592438 . C . PASS END=201592438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 201592439 . C . PASS END=201592471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,529:0,41,255:19,0 chr1 201592472 . G . PASS END=201592472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 201592473 . G . PASS END=201592529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,521:0,40,255:19,0 chr1 201592530 . A . PASS END=201592530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 201592531 . A . PASS END=201592531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 201592532 . G . PASS END=201592543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:22,0 chr1 201592544 . A . PASS END=201592544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 201592545 . T . PASS END=201592550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 201592551 . A . PASS END=201592551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 201592552 . C . PASS END=201592558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,663:0,63,255:21,0 chr1 201592559 . T . PASS END=201592559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 201592560 . C . PASS END=201592569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,790:0,63,255:22,0 chr1 201592570 . C . PASS END=201592572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 201592573 . G . PASS END=201592576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 201592577 . T . PASS END=201592592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:18:0,50,676:0,50,255:18,0 chr1 201592593 . G . PASS END=201592593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 201592594 . G . PASS END=201592625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,645:0,54,255:18,0 chr1 201592626 . G . PASS END=201592628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 201592629 . C . PASS END=201592630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,729:0,47,255:20,0 chr1 201592631 . G . PASS END=201592644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,917:0,65,255:26,0 chr1 201592645 . C . PASS END=201592645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr1 201592646 . C . PASS END=201592646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 201592647 . C . PASS END=201592647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 201592648 . C . PASS END=201592650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 201592651 . T . PASS END=201592664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 201592665 . C . PASS END=201592670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201592671 . G . PASS END=201592671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 201592672 . C . PASS END=201592689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201592690 . G . PASS END=201592690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 201592691 . C . PASS END=201592692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 201592693 . G . PASS END=201592693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 201592694 . A . PASS END=201592694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 201592695 . G . PASS END=201592703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 201592704 . T . PASS END=201592704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 201592705 . C . PASS END=201592728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 201592729 . G . PASS END=201592729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 201592730 . T . PASS END=201592733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 201592734 . G . PASS END=201592734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 201592735 . G . PASS END=201592738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 201598532 . G . PASS END=201598635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,106,1693:0,106,255:40,0 chr1 201617762 . A . PASS END=201617763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr1 201617764 . G . PASS END=201617767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 201617768 . G . PASS END=201617769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:8,0 chr1 201617770 . A . PASS END=201617770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr1 201617771 . T . LowGQ END=201617771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:4,0,245:7,0 chr1 201617772 . C . PASS END=201617772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 201617773 . G . LowGQ END=201617773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,294:9,0,255:8,0 chr1 201617774 . T . PASS END=201617777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 201617778 . T . PASS END=201617779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr1 201617780 . C . PASS END=201617780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 201617781 . G . PASS END=201617781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 201617782 . C . LowGQ END=201617782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 201617783 . T . PASS END=201617783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 201617784 . C . PASS END=201617785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 201617786 . T . LowGQ END=201617786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,340:11,0,255:10,0 chr1 201617787 . C . PASS END=201617787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 201617788 . G . PASS END=201617788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 201617789 . C . PASS END=201617789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 201617790 . G . PASS END=201617790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:11,0 chr1 201617791 . G . PASS END=201617791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 201617792 . G . PASS END=201617792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,363:0,6,255:11,0 chr1 201617793 . C . PASS END=201617793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 201617794 . A . PASS END=201617794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 201617795 . G . PASS END=201617796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 201617797 . A . PASS END=201617797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr1 201617798 . T . PASS END=201617799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,398:0,11,255:13,0 chr1 201617800 . C . PASS END=201617800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201617801 . T . LowGQ END=201617802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,357:5,0,255:12,0 chr1 201617803 . G . PASS END=201617803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,435:0,11,255:13,0 chr1 201617804 . G . PASS END=201617804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 201617805 . C . PASS END=201617805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201617806 . A . PASS END=201617806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 201617807 . G . PASS END=201617807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 201617808 . C . PASS END=201617809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 201617810 . G . LowGQ END=201617810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,355:30,0,255:11,0 chr1 201617811 . C . PASS END=201617811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 201617812 . G . PASS END=201617813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 201617814 . C . PASS END=201617814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 201617815 . A . PASS END=201617819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 201617820 . C . PASS END=201617820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201617821 . G . PASS END=201617821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:12,0 chr1 201617822 . T . PASS END=201617823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 201617824 . C . PASS END=201617824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201617825 . A . PASS END=201617826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 201617827 . C . PASS END=201617829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 201617830 . G . PASS END=201617831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,449:0,23,255:10,0 chr1 201617832 . G . PASS END=201617837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 201617838 . G . PASS END=201617838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 201617839 . C . PASS END=201617839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 201617840 . T . PASS END=201617840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 201617841 . G . PASS END=201617865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 201617866 . G . PASS END=201617909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 201617910 . C . PASS END=201617910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 201617911 . G . PASS END=201617911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:9:9:0,9,135:0,27,255:3,0 chr1 201617912 . G . PASS END=201617914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:12:10:0,12,180:0,14,255:4,0 chr1 201617915 . G . LowGQ END=201617915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:4,0 chr1 201617916 . A . PASS END=201617917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,30,255:4,0 chr1 201617918 . G . LowGQ END=201617918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:4,0 chr1 201617919 . C . PASS END=201617922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:6:0,12,180:0,18,233:4,0 chr1 201617923 . C . LowGQ END=201618040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,31:2,0 chr1 201618041 . C . PASS END=201618092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr1 201618093 . C . PASS END=201618110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:9,0 chr1 201618111 . G . PASS END=201618113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 201618114 . T . PASS END=201618114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 201618115 . T . PASS END=201618116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 201618117 . T . PASS END=201618117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 201618118 . G . PASS END=201618135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr1 201618136 . G . PASS END=201618197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,452:0,42,255:16,0 chr1 201618198 . G . PASS END=201618198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 201618199 . A . PASS END=201618205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201618206 . A . PASS END=201618206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201618207 . G . PASS END=201618207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201618208 . A . PASS END=201618208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:13,0 chr1 201618209 . C . PASS END=201618209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201618210 . G . PASS END=201618212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201618213 . G . PASS END=201618246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,620:0,41,255:18,0 chr1 201618247 . G . PASS END=201618247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr1 201618248 . G . PASS END=201618253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 201618254 . C . PASS END=201618254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 201618255 . G . PASS END=201618270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 201618271 . A . PASS END=201618271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:15,0 chr1 201618272 . C . PASS END=201618274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 201618275 . C . PASS END=201618276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 201618277 . C . PASS END=201618293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 201618294 . C . PASS END=201618294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 201618295 . A . PASS END=201618312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,544:0,48,255:16,0 chr1 201618313 . C . PASS END=201618316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,557:0,32,255:13,0 chr1 201618317 . T . PASS END=201618317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 201618318 . C . PASS END=201618322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 201618323 . G . PASS END=201618323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 201618324 . A . PASS END=201618349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 201618350 . T . PASS END=201618358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 201618359 . C . PASS END=201618365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:16:0,40,630:0,40,255:15,0 chr1 201618366 . A . PASS END=201618366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 201618367 . G . PASS END=201618371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 201618372 . C . PASS END=201618372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 201618373 . G . PASS END=201618379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201618380 . A . PASS END=201618380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201618381 . A . PASS END=201618384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 201618385 . G . PASS END=201618389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 201618390 . A . PASS END=201618390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:13,0 chr1 201618391 . T . PASS END=201618414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,585:0,45,255:18,0 chr1 201618415 . A . PASS END=201618415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 201618416 . A . PASS END=201618417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,601:0,54,255:19,0 chr1 201618418 . G . PASS END=201618418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 201618419 . C . PASS END=201618421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 201618422 . A . PASS END=201618425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 201618426 . G . PASS END=201618426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 201618427 . C . PASS END=201618434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,842:0,72,255:26,0 chr1 201618435 . C . PASS END=201618435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 201618436 . T . PASS END=201618436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 201618437 . C . PASS END=201618453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,918:0,81,255:30,0 chr1 201618454 . G . PASS END=201618454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 201618455 . C . PASS END=201618476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:31,0 chr1 201618477 . C . PASS END=201618477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 201618478 . T . PASS END=201618531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1093:0,80,255:37,0 chr1 201618532 . C . PASS END=201618532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:27,0 chr1 201618533 . T . PASS END=201618533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 201618534 . G . PASS END=201618538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 201618539 . T . PASS END=201618547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1000:0,68,255:26,0 chr1 201618548 . T . PASS END=201618548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201618549 . G . PASS END=201618553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,68,255:22,0 chr1 201681945 . A . PASS END=201681960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 201681961 . A . PASS END=201681964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,946:0,81,255:28,0 chr1 201681965 . A . PASS END=201681965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 201681966 . G . PASS END=201681967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 201681968 . A . PASS END=201681968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 201681969 . C . PASS END=201681969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 201681970 . A . PASS END=201681970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 201681971 . G . PASS END=201681991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1233:0,89,255:38,0 chr1 201681992 . C . PASS END=201681992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 201681993 . G . PASS END=201682047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1268:0,81,255:40,0 chr1 201687518 . C . PASS END=201687532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:13,0 chr1 201687533 . C . PASS END=201687661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:18,0 chr1 201687662 . G . PASS END=201687678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:22,0 chr1 201687679 . G . PASS END=201687679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 201687680 . G . PASS END=201687691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,878:0,69,255:26,0 chr1 201687692 . G . PASS END=201687694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 201687695 . C . PASS END=201687695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201687696 . A . PASS END=201687698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201687699 . C . PASS END=201687709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 201687710 . G . PASS END=201687710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 201687711 . G . PASS END=201687718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 201687719 . C . PASS END=201687737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:27,0 chr1 201687738 . C . PASS END=201687761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,967:0,65,255:25,0 chr1 201687762 . A . PASS END=201687762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:20,0 chr1 201687763 . T . PASS END=201687765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 201687766 . C . PASS END=201687767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 201687768 . C . PASS END=201687773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:22,0 chr1 201687774 . G . PASS END=201687774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 201687775 . A . PASS END=201687775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,746:0,20,255:20,0 chr1 201687776 . G . PASS END=201687780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 201687781 . T . PASS END=201687781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 201687782 . C . PASS END=201687784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr1 201687785 . A . PASS END=201687785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 201687786 . T . PASS END=201687793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 201687794 . C . PASS END=201687813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,50,255:19,0 chr1 201687814 . A . PASS END=201687814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:14,0 chr1 201687815 . G . PASS END=201687822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 201687823 . A . PASS END=201687823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 201687824 . C . PASS END=201687835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 201687836 . T . PASS END=201687839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 201687840 . C . PASS END=201687848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201687849 . A . PASS END=201687854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr1 201687855 . A . PASS END=201687855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 201687856 . T . PASS END=201687870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr1 201687871 . A . PASS END=201687871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 201687872 . C . PASS END=201687873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201687874 . T . PASS END=201687883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 201709152 . A . PASS END=201709168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 201709169 . G . PASS END=201709171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201709172 . C . PASS END=201709199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,405:0,33,255:13,0 chr1 201709200 . C . PASS END=201709200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 201709201 . G . PASS END=201709204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 201749549 . C . PASS END=201749557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1363:0,95,255:36,0 chr1 201749558 . A . PASS END=201749669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1321:0,95,255:40,0 chr1 201749670 . A . PASS END=201749670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:31,0 chr1 201749671 . G . PASS END=201749679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,95,255:33,0 chr1 201749680 . C . PASS END=201749687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:33:0,69,1035:0,91,255:26,0 chr1 201750140 . C . PASS END=201750156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 201750157 . G . PASS END=201750157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201750158 . A . PASS END=201750158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 201750159 . A . PASS END=201750239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1105:0,86,255:34,0 chr1 201750240 . G . PASS END=201750240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:32,0 chr1 201750241 . T . PASS END=201750364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1157:0,83,255:37,0 chr1 201750365 . A . PASS END=201750366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 201750367 . G . PASS END=201750370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 201750371 . A . PASS END=201750378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:31:0,72,1080:0,74,255:26,0 chr1 201750379 . A . PASS END=201750382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 201750383 . G . PASS END=201750383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201750384 . T . PASS END=201750384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 201750385 . G . PASS END=201750405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 201750406 . T . PASS END=201750406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:21,0 chr1 201750407 . C . PASS END=201750410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 201750411 . C . PASS END=201750437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,627:0,51,255:18,0 chr1 201751304 . G . PASS END=201751318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,893:0,62,255:26,0 chr1 201751319 . A . PASS END=201751417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,958:0,84,255:40,0 chr1 201751418 . C . PASS END=201751418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr1 201751419 . C . PASS END=201751471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1154:0,83,255:34,0 chr1 201751472 . C . PASS END=201751513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:26,0 chr1 201751514 . C . PASS END=201751515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 201751516 . G . PASS END=201751516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201751517 . C . PASS END=201751517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 201751518 . C . PASS END=201751526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201751527 . C . PASS END=201751543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:17,0 chr1 201751544 . C . PASS END=201751544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 201751545 . A . PASS END=201751546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 201751547 . G . PASS END=201751567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr1 201751568 . A . PASS END=201751589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,498:0,42,255:19,0 chr1 201751590 . T . PASS END=201751592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 201751593 . T . PASS END=201751607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 201751608 . G . PASS END=201751608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:17,0 chr1 201751609 . C . PASS END=201751611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 201751612 . G . PASS END=201751618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 201751619 . T . PASS END=201751619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 201751620 . G . PASS END=201751620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 201751621 . G . PASS END=201751633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,729:0,57,255:19,0 chr1 201751634 . G . PASS END=201751657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:22,0 chr1 201751658 . T . PASS END=201751658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 201751659 . G . PASS END=201751662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201751663 . C . PASS END=201751663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 201751664 . G . PASS END=201751669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,978:0,78,255:26,0 chr1 201751670 . C . PASS END=201751671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1007:0,81,255:27,0 chr1 201751672 . A . PASS END=201751673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201751674 . G . PASS END=201751687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201751688 . G . PASS END=201751688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 201751689 . C . PASS END=201751689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201751690 . G . PASS END=201751690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 201751691 . T . PASS END=201751692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 201751693 . A . PASS END=201751693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 201751694 . C . PASS END=201751697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 201751698 . C . PASS END=201751698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 201751699 . G . PASS END=201751700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201751701 . G . PASS END=201751702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201751703 . G . PASS END=201751742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1227:0,86,255:34,0 chr1 201751743 . T . PASS END=201751745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,82,255:26,0 chr1 201751746 . C . PASS END=201751781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1141:0,80,255:32,0 chr1 201751782 . A . PASS END=201751782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:29,0 chr1 201751783 . C . PASS END=201751785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:33,0 chr1 201751786 . A . PASS END=201751786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 201751787 . A . PASS END=201751839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1119:0,81,255:34,0 chr1 201751840 . A . PASS END=201751840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 201751841 . C . PASS END=201751848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1169:0,80,255:30,0 chr1 201751849 . G . PASS END=201751849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 201751850 . A . PASS END=201751852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201751853 . A . PASS END=201751853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 201751854 . G . PASS END=201751910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1004:0,86,255:34,0 chr1 201751911 . T . PASS END=201751911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:30,0 chr1 201751912 . A . PASS END=201751924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:30,0 chr1 201751925 . A . PASS END=201751925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 201751926 . A . PASS END=201751982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1169:0,80,255:37,0 chr1 201751983 . A . PASS END=201751984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:31,0 chr1 201751985 . C . PASS END=201751986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:31,0 chr1 201751987 . A . PASS END=201751989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:61:33:0,61,1158:0,61,255:31,0 chr1 201751990 . C . PASS END=201751990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 201751991 . C . PASS END=201751997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1097:0,63,255:31,0 chr1 201752534 . G . PASS END=201752534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr1 201752535 . G . PASS END=201752690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:34:0,89,1241:0,89,255:40,0 chr1 201752691 . T . PASS END=201752691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:32,0 chr1 201752692 . C . PASS END=201752742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1193:0,86,255:35,0 chr1 201752743 . T . PASS END=201752743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 201752744 . C . PASS END=201752867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1133:0,87,255:39,0 chr1 201752868 . T . PASS END=201752868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 201752869 . T . PASS END=201752873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 201752874 . A . PASS END=201752875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201752876 . C . PASS END=201752879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 201752880 . A . PASS END=201752892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:26,0 chr1 201752893 . C . PASS END=201752907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:21:0,42,810:0,42,255:19,0 chr1 201752908 . C . PASS END=201752911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 201752912 . T . PASS END=201752913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 201752914 . C . PASS END=201752914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 201752915 . T . PASS END=201752915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 201752916 . C . PASS END=201752917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201752918 . C . PASS END=201752919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 201752920 . C . PASS END=201752939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 201752940 . C . PASS END=201752953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr1 201752954 . A . PASS END=201752958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 201752959 . C . PASS END=201752969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:11:0,27,405:0,33,255:9,0 chr1 201752970 . C . PASS END=201752971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 201752972 . A . PASS END=201752972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 201752973 . C . PASS END=201752977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr1 201752978 . C . PASS END=201752980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201754438 . T . PASS END=201754440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,176,255:40,0 chr1 201754441 . T . PASS END=201754441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,8:71:36:71:0,36,1981:0,36,255:40,0 chr1 201754442 . C . PASS END=201754452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,5:72:99:71:0,104,1800:0,104,255:40,0 chr1 201754453 . G . PASS END=201754453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,10:72:49:72:0,49,1782:0,49,255:40,0 chr1 201754454 . A . PASS END=201754464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:71:0,119,1800:0,119,255:40,0 chr1 201754465 . C . PASS END=201754479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:91:68:0,91,1800:0,91,255:40,0 chr1 201755557 . G . PASS END=201755705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,123,255:40,0 chr1 201756781 . G . PASS END=201756833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:95:40:0,95,1482:0,95,255:40,0 chr1 201757596 . T . PASS END=201757741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1033:0,81,255:40,0 chr1 201757742 . T . PASS END=201757766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 201758868 . T . PASS END=201758920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,120,1800:0,121,255:40,0 chr1 201759682 . G . PASS END=201759705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1534:0,107,255:40,0 chr1 201759817 . C . PASS END=201759871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,848:0,62,255:25,0 chr1 201759872 . T . PASS END=201759872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:21,0 chr1 201759873 . G . PASS END=201759875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 201759876 . G . PASS END=201759877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:20,0 chr1 201759878 . C . PASS END=201759878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 201759879 . T . PASS END=201759894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,737:0,47,255:19,0 chr1 201762920 . G . PASS END=201762978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,135,255:40,0 chr1 201762979 . C . PASS END=201762979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:59:0,120,1800:0,144,255:40,0 chr1 201762980 . C . PASS END=201762980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:67:59:0,67,1961:0,67,255:40,0 chr1 201762981 . T . PASS END=201762988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,3:58:94:57:0,94,1800:0,94,255:40,0 chr1 201762989 . A . PASS END=201762990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:67:57:0,67,1361:0,67,255:40,0 chr1 201762991 . G . PASS END=201762991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 201762992 . G . PASS END=201762992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:44:55:0,44,1726:0,44,255:40,0 chr1 201762993 . C . PASS END=201762995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:56:0,118,1800:0,118,255:40,0 chr1 201762996 . A . PASS END=201762996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:35:55:0,35,1645:0,35,255:40,0 chr1 201762997 . G . PASS END=201762997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 201762998 . G . PASS END=201762998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:35:55:0,35,1618:0,35,255:40,0 chr1 201762999 . A . PASS END=201762999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:99:55:0,115,1844:0,115,255:40,0 chr1 201763000 . G . PASS END=201763000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:35:55:0,35,1687:0,35,255:40,0 chr1 201763001 . A . PASS END=201763001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:53:0,104,1730:0,104,255:40,0 chr1 201763002 . A . PASS END=201763002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:29:53:0,29,1585:0,29,255:39,0 chr1 201763003 . G . PASS END=201763003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 201763594 . G . PASS END=201763705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,102,1530:0,125,255:40,0 chr1 201772721 . A . PASS END=201772722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,86,255:28,0 chr1 201772723 . C . PASS END=201772723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 201772724 . T . PASS END=201772724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201772725 . T . PASS END=201772725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 201772726 . C . PASS END=201772727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201772728 . G . PASS END=201772728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 201772729 . A . PASS END=201772729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201772730 . T . PASS END=201772730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 201772731 . C . PASS END=201772732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 201772733 . A . PASS END=201772733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr1 201772734 . G . PASS END=201772738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:31,0 chr1 201772739 . A . PASS END=201772739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1019:0,63,255:29,0 chr1 201772740 . A . PASS END=201772740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:30,0 chr1 201772741 . A . PASS END=201772741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:30,0 chr1 201772742 . A . PASS END=201772743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1156:0,93,255:31,0 chr1 201772744 . T . PASS END=201772744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 201772745 . C . PASS END=201772755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1258:0,102,255:34,0 chr1 201772756 . A . PASS END=201772756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 201772757 . T . PASS END=201772820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1357:0,95,255:40,0 chr1 201772821 . A . PASS END=201772844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:52:0,81,1215:0,141,255:34,0 chr1 201772845 . A . PASS END=201772845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:78:53:0,78,1170:0,159,255:26,0 chr1 201772846 . G . PASS END=201772849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:54:0,81,1215:0,146,255:27,0 chr1 201772850 . A . PASS END=201772862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:69:52:0,69,1035:0,149,255:26,0 chr1 201772863 . T TG, 50.00 PASS DP=52;MQ=249.06;MQRankSum=6.172;ReadPosRankSum=2.491;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,27,0:0.519,0.000:52:17,18,0:8,9,0:48:79,0,50,838,778,1616:255,0,255:23,37:5.0000e+01,6.5751e-05,5.2869e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:8,17,9,18:10,15,10,17 chr1 201772864 . G . LowGQ END=201772864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,25:52:0:52:0,0,78:255,0,255:40,0 chr1 201772865 . G . PASS END=201772866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,1 chr1 201772867 . A . PASS END=201772867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1821:0,79,255:40,0 chr1 201772868 . A . PASS END=201772872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 201773617 . G . PASS END=201773625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:82:0,120,1800:0,183,255:40,0 chr1 201777081 . C . PASS END=201777081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 201777082 . T . PASS END=201777084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 201777085 . G . PASS END=201777090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,615:0,43,255:18,0 chr1 201777091 . C . PASS END=201777093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201777094 . T . PASS END=201777094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 201777095 . C . PASS END=201777095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201777096 . A . PASS END=201777097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 201777098 . C . PASS END=201777100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201777101 . A . PASS END=201777101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,527:0,13,255:17,0 chr1 201777102 . G . PASS END=201777102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 201777103 . C . PASS END=201777103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,578:0,18,255:19,0 chr1 201777104 . G . PASS END=201777104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:21,0 chr1 201777105 . T . PASS END=201777106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 201777107 . C . PASS END=201777107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,783:0,55,255:23,0 chr1 201777108 . A . PASS END=201777108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:8:24:0,8,593:0,8,255:21,0 chr1 201777109 . G . PASS END=201777109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,781:0,61,255:25,0 chr1 201777110 . T . PASS END=201777110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,784:0,23,255:24,0 chr1 201777111 . A . PASS END=201777111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 201777112 . T . PASS END=201777112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 201777113 . A . PASS END=201777117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 201777118 . A . PASS END=201777118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,736:0,47,255:25,0 chr1 201777119 . G . PASS END=201777149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,924:0,81,255:37,0 chr1 201777150 . A . PASS END=201777150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1330:0,73,255:37,0 chr1 201777151 . T . PASS END=201777157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:39:0,100,1283:0,100,255:38,0 chr1 201777158 . G . PASS END=201777158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1201:0,54,255:34,0 chr1 201777159 . A . PASS END=201777239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1233:0,86,255:39,0 chr1 201777240 . T . PASS END=201777240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:28,0 chr1 201777241 . C . PASS END=201777250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:30,0 chr1 201777251 . G . PASS END=201777252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 201777253 . C . PASS END=201777257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201777258 . G . PASS END=201777259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201777260 . G . PASS END=201777263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201777264 . A . PASS END=201777277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr1 201777546 . G . PASS END=201777546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 201777547 . G . PASS END=201777547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 201777548 . G . PASS END=201777551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 201777552 . T . PASS END=201777570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,992:0,81,255:38,0 chr1 201777571 . A . PASS END=201777573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1299:0,78,255:37,0 chr1 201777574 . A . PASS END=201777602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:38:0,81,1080:0,81,255:38,0 chr1 201777603 . G . PASS END=201777603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1123:0,37,255:33,0 chr1 201777604 . C . PASS END=201777691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1260:0,94,255:39,0 chr1 201777692 . C . PASS END=201777708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,67,255:26,0 chr1 201777709 . C . PASS END=201777730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,56,255:19,0 chr1 201777731 . A . PASS END=201777738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 201777831 . T . PASS END=201777874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1019:0,84,255:34,0 chr1 201777875 . A . PASS END=201777875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:31,0 chr1 201777876 . G . PASS END=201777971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1169:0,80,255:40,0 chr1 201777972 . T . PASS END=201777979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 201777980 . C . PASS END=201777985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 201777986 . T . PASS END=201777999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,926:0,70,255:26,0 chr1 201778292 . A . PASS END=201778316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1066:0,80,255:35,0 chr1 201778317 . T . PASS END=201778317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:33,0 chr1 201778318 . A . PASS END=201778366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:30:0,84,1213:0,88,255:35,0 chr1 201778367 . C . PASS END=201778367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 201778368 . C . PASS END=201778371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 201778372 . C . PASS END=201778374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 201778375 . C . PASS END=201778378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 201778379 . T . PASS END=201778379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 201778380 . C . PASS END=201778383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201778384 . A . PASS END=201778389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 201778570 . G . PASS END=201778665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:46:0,114,1753:0,114,255:40,0 chr1 201779074 . G . PASS END=201779074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 201779075 . A . PASS END=201779090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,948:0,81,255:30,0 chr1 201779091 . G . PASS END=201779091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr1 201779092 . G . PASS END=201779232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:30:0,84,1117:0,90,255:40,0 chr1 201779233 . G . PASS END=201779233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 201779651 . G . PASS END=201779673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,744:0,66,255:24,0 chr1 201779674 . A . PASS END=201779674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 201779675 . G . PASS END=201779679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:25,0 chr1 201779680 . G . PASS END=201779744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,899:0,81,255:33,0 chr1 201779745 . G . PASS END=201779756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,80,255:26,0 chr1 201779757 . C . PASS END=201779759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201779760 . G . PASS END=201779760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:26,0 chr1 201779761 . G . PASS END=201779761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201779762 . G . PASS END=201779762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:26,0 chr1 201779763 . C . PASS END=201779772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 201779773 . A . PASS END=201779797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,933:0,67,255:26,0 chr1 201779798 . G . PASS END=201779798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 201779799 . C . PASS END=201779816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,945:0,62,255:26,0 chr1 201779817 . G . PASS END=201779819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr1 201779820 . G . PASS END=201779847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,929:0,62,255:26,0 chr1 201779848 . A . PASS END=201779886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,540:0,44,255:19,0 chr1 201780731 . G . PASS END=201780731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 201780732 . A . PASS END=201780732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:23,0 chr1 201780733 . T . PASS END=201780736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 201780737 . C . PASS END=201780740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 201780741 . T . PASS END=201780741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr1 201780742 . G . PASS END=201780885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:32:0,85,1172:0,85,255:40,0 chr1 201781031 . T . PASS END=201781102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,140,255:40,0 chr1 201781593 . G . PASS END=201781593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201781594 . A . PASS END=201781596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 201781597 . T . PASS END=201781597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 201781598 . T . PASS END=201781614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1157:0,82,255:37,0 chr1 201781615 . G . PASS END=201781615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:36,0 chr1 201781616 . T . PASS END=201781779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:34:0,80,1215:0,80,255:40,0 chr1 201781780 . T . PASS END=201781789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,71,255:26,0 chr1 201782268 . G . PASS END=201782386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,102,1530:0,106,255:40,0 chr1 201786216 . G . PASS END=201786234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,899:0,65,255:26,0 chr1 201786235 . C . PASS END=201786249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:30,0 chr1 201786250 . T . PASS END=201786250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 201786251 . G . PASS END=201786340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1041:0,89,255:35,0 chr1 201786341 . C . PASS END=201786343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 201786344 . C . PASS END=201786355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 201786356 . T . PASS END=201786356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 201786357 . C . PASS END=201786359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201786360 . G . PASS END=201786390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 201786391 . G . PASS END=201786393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 201786394 . C . PASS END=201786394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201786395 . T . PASS END=201786406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,53,255:19,0 chr1 201786407 . T . PASS END=201786408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr1 201786409 . C . PASS END=201786409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 201786410 . T . PASS END=201786411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 201786412 . T . PASS END=201786413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 201788965 . A . PASS END=201789051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1180:0,80,255:37,0 chr1 201789052 . A . PASS END=201789052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1169:0,58,255:28,0 chr1 201789053 . C . PASS END=201789060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 201798338 . A . PASS END=201798365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:17,0 chr1 201798366 . C . PASS END=201798378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:24,0 chr1 201798379 . G . PASS END=201798380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 201798381 . G . PASS END=201798394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr1 201798395 . G . PASS END=201798401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201798402 . A . PASS END=201798404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr1 201798405 . A . PASS END=201798405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201798406 . A . PASS END=201798406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 201798407 . G . PASS END=201798416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1202:0,87,255:31,0 chr1 201798417 . A . PASS END=201798417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 201798418 . T . PASS END=201798436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1135:0,93,255:31,0 chr1 201798437 . T . PASS END=201798437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 201798438 . C . PASS END=201798467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:30,0 chr1 201798468 . A . PASS END=201798485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 201798486 . T . PASS END=201798486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 201798487 . G . PASS END=201798495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 201798496 . G . PASS END=201798500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:18,0 chr1 201816407 . A . PASS END=201816468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:39:0,86,1404:0,86,255:40,1 chr1 201816680 . C . PASS END=201816766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:50:0,120,1800:0,126,255:40,0 chr1 201817521 . G . PASS END=201817526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 201817527 . A . PASS END=201817527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:21,0 chr1 201817528 . T . PASS END=201817531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:23,0 chr1 201817532 . T . PASS END=201817532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 201817533 . A . PASS END=201817553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,787:0,69,255:26,0 chr1 201817554 . G . PASS END=201817561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr1 201817562 . A . PASS END=201817562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 201817563 . G . PASS END=201817719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:32:0,90,1249:0,96,255:40,0 chr1 201817720 . C . PASS END=201817722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 201821232 . A . PASS END=201821320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,121,255:40,0 chr1 201822139 . G . PASS END=201822225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:42:0,93,1443:0,93,255:40,0 chr1 201823723 . G . PASS END=201823830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:33:0,89,1174:0,89,255:40,0 chr1 201823831 . G . PASS END=201823834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 201823835 . T . PASS END=201823842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 201823951 . G . PASS END=201824051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:58:0,120,1800:0,155,255:40,0 chr1 201824252 . T . PASS END=201824310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:86:0,120,1800:0,242,255:40,0 chr1 201824911 . G . PASS END=201825062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:41:0,102,1530:0,123,255:40,0 chr1 201826224 . A . PASS END=201826273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,140,255:40,0 chr1 201826274 . T . PASS END=201826274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,7:64:75:64:0,75,1763:0,75,255:40,0 chr1 201826275 . G . PASS END=201826322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,105,1575:0,126,255:40,0 chr1 201827575 . G . PASS END=201827575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:31,0 chr1 201827576 . C . PASS END=201827576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:15:32:0,15,914:0,15,255:28,0 chr1 201827577 . T . PASS END=201827578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1134:0,96,255:32,0 chr1 201827579 . T . PASS END=201827579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 201827580 . G . PASS END=201827580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1208:0,83,255:32,0 chr1 201827581 . G . PASS END=201827583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:30,0 chr1 201827584 . A . PASS END=201827584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:30,0 chr1 201827585 . C . PASS END=201827585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1069:0,27,255:27,0 chr1 201827586 . A . PASS END=201827586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:29,0 chr1 201827587 . G . PASS END=201827587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1147:0,41,255:29,0 chr1 201827588 . A . PASS END=201827588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1138:0,72,255:30,0 chr1 201827589 . T . PASS END=201827590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 201827591 . T . PASS END=201827592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1164:0,66,255:31,0 chr1 201827593 . C . PASS END=201827593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:22:34:0,22,1030:0,22,255:28,0 chr1 201827594 . A . PASS END=201827594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1174:0,85,255:31,0 chr1 201827595 . G . LowGQ END=201827595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,975:17,0,255:27,0 chr1 201827596 . A . PASS END=201827596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 201827597 . A . PASS END=201827597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 201827598 . T . PASS END=201827598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 201827599 . G . PASS END=201827599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1031:0,49,255:29,0 chr1 201827600 . A . PASS END=201827601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:32,0 chr1 201827602 . A . PASS END=201827602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1053:0,49,255:29,0 chr1 201827603 . G . PASS END=201827603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 201827604 . T . PASS END=201827604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,951:0,33,255:28,0 chr1 201827605 . G . LowGQ END=201827605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:33:0,0,951:6,0,255:27,0 chr1 201827606 . C . PASS END=201827606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 201827607 . A . PASS END=201827608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:34:0,50,1080:0,50,255:32,0 chr1 201827609 . C . PASS END=201827609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 201827610 . A . LowGQ END=201827610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:0:37:0,0,978:8,0,255:31,0 chr1 201827611 . G . PASS END=201827612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1340:0,103,255:39,0 chr1 201827613 . C . PASS END=201827613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1180:0,53,255:34,0 chr1 201827614 . C . LowGQ END=201827615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:0:40:0,0,1062:0,0,255:34,0 chr1 201827616 . G . PASS END=201827617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1502:0,107,255:38,0 chr1 201827618 . C . PASS END=201827618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:24:41:0,24,1153:0,24,255:32,0 chr1 201827619 . T . PASS END=201827619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1233:0,57,255:34,0 chr1 201827620 . G . PASS END=201827620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1313:0,90,255:36,0 chr1 201827621 . C . PASS END=201827621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:40:41:0,40,1192:0,40,255:34,0 chr1 201827622 . T . PASS END=201827622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:24:41:0,24,1197:0,24,255:32,0 chr1 201827623 . G . PASS END=201827623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:9:41:0,9,1155:0,9,255:32,0 chr1 201827624 . C . PASS END=201827624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1328:0,93,255:38,0 chr1 201827625 . A . PASS END=201827625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1258:0,59,255:36,0 chr1 201827626 . G . PASS END=201827658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:41:0,84,1451:0,84,255:40,2 chr1 201827659 . A . PASS END=201827659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:43:43:0,43,1449:0,43,255:37,2 chr1 201827660 . A . PASS END=201827676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1350:0,87,255:39,0 chr1 201827677 . C . PASS END=201827677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 201827678 . A . PASS END=201827681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,105,255:25,0 chr1 201827983 . G . PASS END=201827989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201827990 . A . PASS END=201827990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,873:0,70,255:27,0 chr1 201827991 . T . PASS END=201827994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1084:0,87,255:29,0 chr1 201827995 . T . PASS END=201827997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1078:0,74,255:26,0 chr1 201827998 . G . PASS END=201828106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1166:0,85,255:40,0 chr1 201828107 . G . PASS END=201828122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,77,255:25,0 chr1 201832576 . T . PASS END=201832577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:31,0 chr1 201832578 . T . PASS END=201832578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 201832579 . C . PASS END=201832599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:31:0,93,1119:0,93,255:38,0 chr1 201832600 . C . PASS END=201832600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr1 201832601 . A . PASS END=201832735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:39:0,91,1210:0,91,255:40,0 chr1 201835861 . T . PASS END=201836087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:29:0,87,1100:0,87,255:40,0 chr1 201837776 . A . PASS END=201837896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1057:0,87,255:40,0 chr1 201837897 . A . PASS END=201837897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:32,0 chr1 201837898 . G . PASS END=201837924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:34,0 chr1 201838718 . A . PASS END=201838718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:25,0 chr1 201838719 . C . PASS END=201838719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201838720 . A . PASS END=201838720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201838721 . G . PASS END=201838826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:31:0,83,1255:0,83,255:40,2 chr1 201838827 . A . PASS END=201838827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr1 201838828 . T . PASS END=201838828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 201838829 . G . PASS END=201838829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 201838830 . A . PASS END=201838846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 201839711 . A . PASS END=201839721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 201839722 . G . PASS END=201839736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,821:0,66,255:28,0 chr1 201839737 . T . PASS END=201839738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr1 201839739 . T . PASS END=201839739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 201839740 . G . PASS END=201839747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 201839748 . C . PASS END=201839748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr1 201839749 . C . PASS END=201839783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1094:0,90,255:37,0 chr1 201839784 . G . PASS END=201839784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:34,0 chr1 201839785 . C . PASS END=201839862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1233:0,89,255:37,0 chr1 201839863 . T . PASS END=201839863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 201839864 . G . PASS END=201839944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1249:0,89,255:39,0 chr1 201839945 . C . PASS END=201839973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,892:0,61,255:26,0 chr1 201839974 . C . PASS END=201839974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:19,0 chr1 201839975 . A . PASS END=201839975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 201839976 . G . PASS END=201839976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 201839977 . T . PASS END=201839980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 201839981 . A . PASS END=201839981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:18,0 chr1 201839982 . T . PASS END=201839986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:18,0 chr1 201840289 . T . PASS END=201840300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,653:0,54,255:19,0 chr1 201840301 . G . PASS END=201840310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 201840311 . A . PASS END=201840314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 201840315 . G . PASS END=201840320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201840321 . C . PASS END=201840321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 201840322 . A . PASS END=201840330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 201840331 . G . PASS END=201840345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,721:0,49,255:19,0 chr1 201840346 . T . PASS END=201840355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr1 201840356 . G . PASS END=201840358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 201840359 . T . PASS END=201840364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 201840365 . G . PASS END=201840390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 201840391 . T . PASS END=201840391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:20:0,26,485:0,26,255:17,0 chr1 201840392 . T . PASS END=201840420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,647:0,41,255:19,0 chr1 201840421 . C . PASS END=201840421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 201840422 . A . PASS END=201840422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 201840423 . C . PASS END=201840423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 201840424 . C . PASS END=201840424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 201840425 . T . PASS END=201840425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:13,0 chr1 201840426 . G . PASS END=201840426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 201840427 . T . PASS END=201840428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 201840429 . C . PASS END=201840435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,42,255:13,0 chr1 201840436 . C . PASS END=201840438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:8,0 chr1 201840439 . T . PASS END=201840439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:8,0 chr1 201840440 . A . PASS END=201840451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:9:0,24,360:0,27,255:9,0 chr1 201840452 . T . PASS END=201840455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 201841956 . C . PASS END=201842089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1215:0,87,255:40,0 chr1 201843378 . A . PASS END=201843454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1052:0,90,255:38,0 chr1 201843455 . G . PASS END=201843466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr1 201843467 . G . PASS END=201843468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr1 201843469 . T . PASS END=201843477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,990:0,65,255:23,0 chr1 201843478 . C . PASS END=201843500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,630:0,41,255:18,0 chr1 201843960 . A . PASS END=201843997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:80:44:0,80,1598:0,80,255:40,6 chr1 201843998 . G . LowGQ END=201843999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,7:77:0:77:0,0,2374:0,0,255:40,6 chr1 201844000 . G . PASS END=201844000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,6:77:23:77:0,23,2491:0,23,255:40,6 chr1 201844001 . G . PASS END=201844064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:96:64:0,96,1800:0,96,255:40,0 chr1 201844280 . A . PASS END=201844356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,108,1620:0,127,255:40,0 chr1 201845072 . G . PASS END=201845261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1143:0,80,255:40,2 chr1 201845262 . T . PASS END=201845262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr1 201845263 . T . PASS END=201845266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr1 201845267 . T . PASS END=201845267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:30,0 chr1 201845268 . C . PASS END=201845289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 201845290 . A . PASS END=201845291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201845292 . C . PASS END=201845299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 201845300 . C . PASS END=201845313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:26:0,71,933:0,71,255:26,0 chr1 201845314 . T . PASS END=201845314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201845315 . G . PASS END=201845315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 201845316 . A . PASS END=201845316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 201845317 . C . PASS END=201845324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201845325 . A . PASS END=201845335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 201845336 . C . PASS END=201845351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:17:0,45,637:0,51,255:19,0 chr1 201845352 . G . PASS END=201845352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 201845353 . T . PASS END=201845360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 201858123 . A . PASS END=201858129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 201858130 . C . PASS END=201858130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 201858131 . C . PASS END=201858149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 201858150 . G . PASS END=201858150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr1 201858151 . C . PASS END=201858154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 201858155 . G . PASS END=201858159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,576:0,45,255:16,0 chr1 201858160 . C . PASS END=201858160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 201858161 . C . PASS END=201858170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 201858171 . C . PASS END=201858171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 201858172 . T . PASS END=201858173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 201858174 . T . PASS END=201858175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,393:0,31,255:15,0 chr1 201858176 . G . PASS END=201858183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 201858184 . G . PASS END=201858184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 201858185 . G . PASS END=201858186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 201858187 . C . PASS END=201858187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 201858188 . T . PASS END=201858188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 201858189 . C . PASS END=201858191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 201858192 . C . PASS END=201858193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 201858194 . G . PASS END=201858194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 201858195 . G . PASS END=201858195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 201858573 . T . PASS END=201858573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 201858574 . G . PASS END=201858581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:30,0 chr1 201858582 . G . PASS END=201858582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr1 201858583 . C . PASS END=201858719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:30:0,81,1052:0,82,255:40,0 chr1 201858720 . A . PASS END=201858744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 201859582 . C . PASS END=201859708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1139:0,80,255:40,0 chr1 201859709 . T . PASS END=201859709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 201859710 . T . PASS END=201859714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 201859715 . G . PASS END=201859715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 201860529 . G . PASS END=201860561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:9,0 chr1 201860562 . A . PASS END=201860564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 201860565 . C . PASS END=201860565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 201860566 . A . PASS END=201860588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 201860589 . C . PASS END=201860590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 201860591 . A . PASS END=201860591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 201860592 . A . PASS END=201860613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 201860614 . G . PASS END=201860625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 201860626 . A G, 92.14 PASS DP=15;MQ=248.29;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,11,0:0,4,0:42:130,45,0,566,45,566:255,45,0:0,0:9.2140e+01,4.2140e+01,2.6534e-04,4.5000e+02,7.6910e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,7:0,0,10,5 chr1 201860627 . T . PASS END=201860634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 201860635 . T . PASS END=201860655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,398:0,36,255:13,0 chr1 201860656 . T . PASS END=201860661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 201860662 . C . PASS END=201860663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 201860664 . A . PASS END=201860665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 201860666 . C . PASS END=201860666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 201860667 . C . PASS END=201860675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 201860676 . C . PASS END=201860676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 201860677 . C . PASS END=201860677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 201860678 . C . PASS END=201860682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 201860683 . C . PASS END=201860690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 201860691 . C . PASS END=201860692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 201860693 . G . PASS END=201860695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201860696 . G . PASS END=201860696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201860928 . C . PASS END=201860974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:36:0,92,1310:0,92,255:40,0 chr1 201867500 . C . PASS END=201867526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,117,1755:0,123,255:40,0 chr1 201868365 . C . PASS END=201868365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 201868366 . T . PASS END=201868366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 201868367 . T . PASS END=201868367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr1 201868368 . C . PASS END=201868373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 201868374 . C . PASS END=201868375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 201868376 . G . PASS END=201868377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201868378 . T . PASS END=201868378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 201868379 . T . PASS END=201868380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201868381 . A . PASS END=201868381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 201868382 . G . PASS END=201868427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1241:0,89,255:36,0 chr1 201868428 . C . PASS END=201868428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr1 201868429 . T . PASS END=201868459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:32:0,85,1111:0,85,255:37,0 chr1 201868460 . T . PASS END=201868460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:29,0 chr1 201868461 . C . PASS END=201868463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 201868464 . C . PASS END=201868465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1021:0,79,255:28,0 chr1 201868466 . G . PASS END=201868469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr1 201868470 . A . PASS END=201868470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 201868471 . G . PASS END=201868477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1101:0,80,255:31,0 chr1 201868478 . A . PASS END=201868478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:29,0 chr1 201868479 . G . PASS END=201868479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:30,0 chr1 201868480 . A . PASS END=201868480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,889:0,32,255:28,0 chr1 201868481 . G . PASS END=201868482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1097:0,93,255:31,0 chr1 201868483 . G . PASS END=201868483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:30,0 chr1 201868484 . A . PASS END=201868485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1050:0,93,255:31,0 chr1 201868486 . T . PASS END=201868486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr1 201868487 . T . PASS END=201868487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,904:0,27,255:27,0 chr1 201868488 . C . PASS END=201868488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr1 201868489 . T . PASS END=201868489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 201868490 . T . PASS END=201868490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,959:0,27,255:27,0 chr1 201868491 . C . PASS END=201868491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 201868492 . A . PASS END=201868495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1016:0,92,255:31,0 chr1 201868496 . T . PASS END=201868496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,991:0,76,255:29,0 chr1 201868497 . C . PASS END=201868497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 201868498 . T . PASS END=201868498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,919:0,32,255:27,0 chr1 201868499 . C . PASS END=201868505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1050:0,80,255:30,0 chr1 201868506 . A . PASS END=201868506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,970:0,24,255:26,0 chr1 201868507 . A . PASS END=201868507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,972:0,63,255:25,0 chr1 201868508 . G . PASS END=201868511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 201868512 . T . PASS END=201868512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:26,0 chr1 201868513 . G . PASS END=201868513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201868514 . G . PASS END=201868515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1041:0,63,255:27,0 chr1 201868516 . G . PASS END=201868518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 201868519 . A . PASS END=201868519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1017:0,54,255:26,0 chr1 201868520 . A . PASS END=201868523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,902:0,60,255:25,0 chr1 201868524 . A . LowGQ END=201868524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,787:21,0,255:20,0 chr1 201868525 . G . PASS END=201868526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 201868527 . G . PASS END=201868529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201868530 . A . PASS END=201868530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1021:0,79,255:26,0 chr1 201868531 . G . PASS END=201868535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 201868536 . T . PASS END=201868536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1104:0,65,255:30,0 chr1 201868537 . G . PASS END=201868539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:31,0 chr1 201868540 . G . PASS END=201868540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 201868541 . G . PASS END=201868541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:27,0 chr1 201868542 . G . PASS END=201868543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 201868544 . C . PASS END=201868547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 201868548 . T . PASS END=201868548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1086:0,52,255:26,0 chr1 201868549 . G . PASS END=201868558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1127:0,85,255:29,0 chr1 201868559 . C . PASS END=201868560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 201868561 . T . PASS END=201868561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,954:0,57,255:26,0 chr1 201868562 . T . PASS END=201868562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 201868563 . T . PASS END=201868563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,891:0,54,255:25,0 chr1 201868564 . T . PASS END=201868573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 201868574 . T . PASS END=201868574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201868575 . C . PASS END=201868575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 201868576 . T . PASS END=201868576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201868577 . T . PASS END=201868583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1055:0,74,255:26,0 chr1 201868584 . G . PASS END=201868584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:25,0 chr1 201868585 . G . PASS END=201868585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 201868586 . G . PASS END=201868592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201868593 . A . PASS END=201868601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 201868602 . A . PASS END=201868607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 201868608 . A . PASS END=201868608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:25,0 chr1 201868609 . G . PASS END=201868617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 201868618 . G . PASS END=201868619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:74:30:0,74,1062:0,74,255:28,0 chr1 201868620 . G . PASS END=201868751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1159:0,80,255:38,0 chr1 201868752 . G . PASS END=201868752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1198:0,74,255:30,0 chr1 201868753 . A . PASS END=201868753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 201868754 . C . PASS END=201868754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1141:0,72,255:29,0 chr1 201868755 . A . PASS END=201868755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1156:0,85,255:29,0 chr1 201868756 . G . PASS END=201868756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:31,0 chr1 201868757 . T . PASS END=201868769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:38:0,96,1440:0,114,255:35,0 chr1 201868770 . G . PASS END=201868770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1202:0,50,255:32,0 chr1 201868771 . G . PASS END=201868780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:36,0 chr1 201868781 . A . PASS END=201868781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1222:0,45,255:32,0 chr1 201868782 . A . PASS END=201868810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:32:0,80,1125:0,80,255:34,0 chr1 201868811 . T . PASS END=201868811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:27,0 chr1 201868812 . C . PASS END=201868817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1115:0,90,255:30,0 chr1 201868818 . C . PASS END=201868818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 201868819 . A . PASS END=201868824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1058:0,90,255:32,0 chr1 201868825 . T . PASS END=201868825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,979:0,63,255:30,0 chr1 201868826 . T . PASS END=201868958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:32:0,92,1172:0,92,255:40,0 chr1 201868959 . C . PASS END=201868959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:31,0 chr1 201868960 . A . PASS END=201868976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1286:0,89,255:33,0 chr1 201868977 . G . PASS END=201868977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:28,0 chr1 201868978 . G . PASS END=201869210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:32:0,84,994:0,88,255:40,0 chr1 201869211 . C . PASS END=201869211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:38,0 chr1 201869212 . T . PASS END=201869498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,103,1665:0,103,255:40,0 chr1 201869499 . C . PASS END=201869499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,8:62:53:62:0,53,1632:0,53,255:40,0 chr1 201869500 . A . PASS END=201869500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,6:62:86:62:0,86,1841:0,86,255:40,0 chr1 201869501 . C . PASS END=201869501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,9:64:20:64:0,20,1654:0,20,255:40,0 chr1 201869502 . C . PASS END=201869599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:82:55:0,82,1575:0,82,255:40,0 chr1 201869600 . T . PASS END=201869600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:73:54:0,73,1565:0,73,255:32,0 chr1 201869601 . C . PASS END=201869632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:88:42:0,88,1316:0,88,255:40,0 chr1 201869633 . T . PASS END=201869633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1297:0,57,255:32,0 chr1 201869634 . C . PASS END=201869642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:40:0,87,1338:0,87,255:37,0 chr1 201869643 . T . PASS END=201869643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1210:0,64,255:30,0 chr1 201869644 . G . PASS END=201869650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:38:0,87,1305:0,106,255:33,0 chr1 201869651 . T . PASS END=201869652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:68:41:0,68,1320:0,68,255:30,0 chr1 201869653 . A . PASS END=201869664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:35:0,81,1173:0,81,255:33,0 chr1 201869665 . T . PASS END=201869665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:31,0 chr1 201869666 . C . PASS END=201869668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 201869669 . T . PASS END=201869669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr1 201869670 . G . PASS END=201869678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr1 201869679 . G . PASS END=201869679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 201869680 . A . PASS END=201869680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1003:0,66,255:29,0 chr1 201869681 . T . PASS END=201869691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1074:0,82,255:32,0 chr1 201869692 . T . PASS END=201869692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:32,0 chr1 201869693 . T . PASS END=201869845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1180:0,84,255:40,0 chr1 201869846 . T . PASS END=201869846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:32,0 chr1 201869847 . G . PASS END=201869849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:32,0 chr1 201869850 . A . PASS END=201869854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,1125:0,66,255:25,0 chr1 201869855 . T . PASS END=201869855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1170:0,58,255:23,0 chr1 201869856 . C . PASS END=201869860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:26,0 chr1 201869861 . T . PASS END=201869870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:24:0,42,765:0,42,255:19,0 chr1 201869871 . C . PASS END=201869873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 201869874 . G . PASS END=201869874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 201869875 . C . PASS END=201869877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 201869878 . T . PASS END=201869878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 201869879 . C . PASS END=201869879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201915208 . A . PASS END=201915208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr1 201915209 . T . PASS END=201915292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,956:0,81,255:38,0 chr1 201915293 . G . PASS END=201915329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1371:0,95,255:38,0 chr1 201915330 . C A, 45.19 PASS DP=39;MQ=250.00;MQRankSum=5.182;ReadPosRankSum=1.198;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,15,0:0.385,0.000:39:11,9,0:13,6,0:45:80,0,50,483,858,1341:255,0,255:23,0:4.5188e+01,1.5325e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,6,9:15,9,8,7 chr1 201915331 . G . PASS END=201915367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:33:0,90,1312:0,94,255:35,0 chr1 201915368 . T . PASS END=201915368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:28,0 chr1 201915369 . T . PASS END=201915370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:28,0 chr1 201915371 . T . PASS END=201915383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 201915384 . T . PASS END=201915384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,987:0,59,255:27,0 chr1 201915385 . C . PASS END=201915385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 201915386 . T . PASS END=201915412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:25,0 chr1 201915413 . C . PASS END=201915413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 201915414 . T . PASS END=201915424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 201915425 . G . PASS END=201915425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 201915426 . G . PASS END=201915437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr1 201915438 . C . PASS END=201915438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 201915439 . C . PASS END=201915441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 201915442 . C . PASS END=201915442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 201915443 . C . PASS END=201915450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 201915451 . T . PASS END=201915456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 201915457 . T . PASS END=201915466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:19:0,30,450:0,44,255:12,0 chr1 201915467 . A . PASS END=201915467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 201915468 . T . PASS END=201915468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 201924655 . A . PASS END=201924680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1255:0,96,255:33,0 chr1 201926409 . C . PASS END=201926429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:32:0,89,1150:0,89,255:37,0 chr1 201926430 . C . PASS END=201926508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1376:0,81,255:40,0 chr1 201926639 . G . PASS END=201926702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,117,1755:0,150,255:40,0 chr1 201932744 . G . PASS END=201932872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:31:0,91,1127:0,91,255:40,0 chr1 201934561 . A . PASS END=201934565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:28,0 chr1 201934566 . C . PASS END=201934566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 201934567 . C . PASS END=201934568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201934569 . G . PASS END=201934569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201934570 . T . PASS END=201934658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1112:0,80,255:38,0 chr1 201934659 . C . PASS END=201934671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 201938597 . G . PASS END=201938682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,120,1800:0,131,255:40,0 chr1 201951795 . A . PASS END=201951804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr1 201951805 . G . PASS END=201951856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:18,0 chr1 201951857 . G . PASS END=201951887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,717:0,60,255:21,0 chr1 201951888 . C . PASS END=201951899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,692:0,46,255:19,0 chr1 201951900 . C . PASS END=201951900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 201951901 . T . PASS END=201951901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 201951902 . G . PASS END=201951913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,760:0,63,255:22,0 chr1 201951914 . C . PASS END=201951930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,49,255:19,0 chr1 201951931 . A . PASS END=201951971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,427:0,36,255:13,0 chr1 201951972 . A . PASS END=201951974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 201951975 . G . PASS END=201951975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:9,0 chr1 201951976 . G . PASS END=201951980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr1 201951981 . G . LowGQ END=201951982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:9,0 chr1 201951983 . G . PASS END=201951983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201951984 . G . LowGQ END=201951986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:0,0,255:11,0 chr1 201951987 . C . PASS END=201951987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 201951988 . T . LowGQ END=201951994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 201951995 . G . PASS END=201951995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 201951996 . C . LowGQ END=201951999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:9,0 chr1 201952000 . G . PASS END=201952000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 201952001 . C . LowGQ END=201952001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 201952002 . C . PASS END=201952002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 201952003 . T . LowGQ END=201952003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 201952004 . G . PASS END=201952005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 201952006 . A . LowGQ END=201952009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:11:0,0,319:3,0,255:10,0 chr1 201952010 . C . PASS END=201952011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201952012 . A . LowGQ END=201952012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 201952013 . G . PASS END=201952013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201952014 . G . LowGQ END=201952016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,333:6,0,255:10,0 chr1 201952017 . G . PASS END=201952017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201952018 . C . LowGQ END=201952018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 201952019 . C . PASS END=201952019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201952020 . G . LowGQ END=201952020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 201952021 . C . PASS END=201952021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201952022 . C . LowGQ END=201952023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr1 201952024 . A . PASS END=201952024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 201952025 . G . LowGQ END=201952027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr1 201952028 . G . PASS END=201952028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 201952029 . C . LowGQ END=201952031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,304:6,0,255:9,0 chr1 201952032 . C . PASS END=201952040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 201952041 . C . PASS END=201952072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 201952073 . G . LowGQ END=201952073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 201952074 . C . PASS END=201952089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 201952090 . G . PASS END=201952133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:9,0 chr1 201952134 . C . PASS END=201952134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 201952135 . C . PASS END=201952149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 201952150 . G . PASS END=201952213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 201952214 . C . PASS END=201952234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,311:0,27,255:9,0 chr1 201952235 . A . LowGQ END=201952235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,235:4,0,239:7,0 chr1 201952236 . C . PASS END=201952241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 201952591 . A . PASS END=201952597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,131,255:40,0 chr1 201952598 . G A, 45.18 PASS DP=50;MQ=250.00;MQRankSum=5.876;ReadPosRankSum=3.518;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,19,0:0.380,0.000:50:16,12,0:15,7,0:45:80,0,50,671,1072,1743:255,0,255:30,0:4.5182e+01,1.5351e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,12,7:13,18,9,10 chr1 201952599 . T . PASS END=201952635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,117,1782:0,117,255:40,0 chr1 201952636 . T . PASS END=201952644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,114,1710:0,132,255:40,0 chr1 201958032 . G . PASS END=201958032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 201958033 . T . PASS END=201958033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,599:0,38,255:21,0 chr1 201958034 . T . PASS END=201958040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 201958041 . T . PASS END=201958042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,717:0,55,255:22,0 chr1 201958043 . G . PASS END=201958066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,894:0,69,255:26,0 chr1 201958067 . G . PASS END=201958068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,968:0,81,255:27,0 chr1 201958069 . A . PASS END=201958069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 201958070 . G . PASS END=201958073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr1 201958074 . C . PASS END=201958074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,906:0,26,255:25,0 chr1 201958075 . C . PASS END=201958075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 201958076 . C . PASS END=201958076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201958077 . T . PASS END=201958077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201958078 . T . PASS END=201958079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201958080 . G . PASS END=201958121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr1 201958122 . C . PASS END=201958122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 201958123 . C . PASS END=201958142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 201958143 . G . PASS END=201958143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 201958144 . T . PASS END=201958151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 201958152 . A . PASS END=201958156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 201958157 . T . PASS END=201958158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201958159 . C . PASS END=201958172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 201958511 . G . PASS END=201958659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,103,1469:0,103,255:40,0 chr1 201965275 . G . PASS END=201965391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,140,255:40,0 chr1 201966447 . G . PASS END=201966450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:25,0 chr1 201966451 . G . PASS END=201966453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201966454 . T . PASS END=201966458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201966459 . C . PASS END=201966642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1188:0,87,255:40,0 chr1 201966643 . A . PASS END=201966652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 201966653 . C . PASS END=201966654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201966655 . C . PASS END=201966670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,67,255:25,0 chr1 201966671 . C . PASS END=201966682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 201969030 . G . PASS END=201969034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,706:0,57,255:19,0 chr1 201969035 . G . PASS END=201969035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:21,0 chr1 201969036 . C . PASS END=201969057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 201969058 . A . PASS END=201969058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 201969059 . A . PASS END=201969081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,831:0,66,255:26,0 chr1 201969082 . G . PASS END=201969082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 201969083 . C . PASS END=201969096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,937:0,62,255:25,0 chr1 201969097 . T . PASS END=201969097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 201969098 . G . PASS END=201969121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr1 201969122 . C . PASS END=201969122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 201969123 . T . PASS END=201969140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 201969141 . C . PASS END=201969143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 201970504 . G . PASS END=201970524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,109,1460:0,109,255:40,0 chr1 201970525 . A . PASS END=201970561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:50:0,120,1800:0,126,255:40,0 chr1 201970562 . T C, 227.12 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,29,0:0,31,0:177:265,180,0,2287,180,2287:255,183,0:0,0:2.2712e+02,1.7712e+02,0.0000e+00,4.5000e+02,2.1189e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,31:0,0,30,30 chr1 201970563 . T . PASS END=201970599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:46:0,120,1800:0,133,255:40,0 chr1 201970600 . T . PASS END=201970616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,101,1728:0,101,255:40,0 chr1 201970787 . G . PASS END=201970895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,105,1575:0,116,255:40,0 chr1 201972365 . G . PASS END=201972402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:19,0 chr1 201972403 . C . PASS END=201972404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 201972405 . C . PASS END=201972405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 201972406 . C . PASS END=201972406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201972407 . C . PASS END=201972434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:36,0 chr1 201972435 . C . PASS END=201972435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 201972436 . T . PASS END=201972586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,83,255:40,0 chr1 201972587 . C . PASS END=201972589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,972:0,70,255:26,0 chr1 201973482 . G . PASS END=201973486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 201973487 . G . PASS END=201973487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 201973488 . T . PASS END=201973496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1087:0,93,255:32,0 chr1 201973497 . T . PASS END=201973497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr1 201973498 . T . PASS END=201973521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1083:0,83,255:40,0 chr1 201973522 . A . PASS END=201973523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:68:41:0,68,1355:0,68,255:38,0 chr1 201973524 . A . PASS END=201973527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,120,1506:0,120,255:40,0 chr1 201973528 . C . PASS END=201973564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,105,1488:0,105,255:40,0 chr1 201973565 . G A, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=4.159;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,23,0:0.523,0.000:44:18,11,0:3,12,0:47:85,0,47,185,185,185:255,0,255:18,0:5.0000e+01,8.8272e-05,4.9865e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,9,13,10:11,10,13,10 chr1 201973566 . T . PASS END=201973602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:38:0,90,1352:0,90,255:40,0 chr1 201973603 . G . PASS END=201973621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,95,255:32,0 chr1 201973622 . C . PASS END=201973624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:33:0,68,1170:0,68,255:26,0 chr1 201974686 . G . PASS END=201974696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:17,0 chr1 201974697 . G . PASS END=201974702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 201974703 . A . PASS END=201974703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 201974704 . C . PASS END=201974713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:26,0 chr1 201974714 . A . PASS END=201974718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 201974719 . G . PASS END=201974719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 201974720 . C . PASS END=201974804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1260:0,90,255:40,0 chr1 201974805 . C . PASS END=201974805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 201974806 . A . PASS END=201974809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 201974810 . A . PASS END=201974844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 201980265 . A . PASS END=201980268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 201980269 . C . PASS END=201980273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 201980274 . A . PASS END=201980274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 201980275 . C . PASS END=201980280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 201980281 . A . PASS END=201980281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 201980282 . G . PASS END=201980291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 201980292 . A . PASS END=201980292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 201980293 . T . PASS END=201980296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 201980297 . T . PASS END=201980297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 201980298 . A . PASS END=201980309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:31,0 chr1 201980310 . A . PASS END=201980310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 201980311 . G . PASS END=201980363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1143:0,80,255:32,0 chr1 201980364 . A . PASS END=201980364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr1 201980365 . C . PASS END=201980370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1170:0,83,255:31,0 chr1 201980371 . G . PASS END=201980371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:28,0 chr1 201980372 . G . PASS END=201980377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:30,0 chr1 201980378 . T . PASS END=201980394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:26,0 chr1 201980395 . T . PASS END=201980395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:23,0 chr1 201980396 . G . PASS END=201980418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 201980419 . A . PASS END=201980427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 201981085 . A . PASS END=201981085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,784:0,20,255:23,0 chr1 201981086 . G . PASS END=201981086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 201981087 . A . PASS END=201981087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,698:0,25,255:22,0 chr1 201981088 . A . PASS END=201981094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 201981095 . C . PASS END=201981095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,864:0,47,255:24,0 chr1 201981096 . T . PASS END=201981097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:25,0 chr1 201981098 . G . PASS END=201981098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:24,0 chr1 201981099 . T . PASS END=201981100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 201981101 . G . PASS END=201981101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:24,0 chr1 201981102 . G . PASS END=201981104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 201981105 . G . PASS END=201981110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 201981111 . C . PASS END=201981111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201981112 . C . PASS END=201981115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,972:0,70,255:26,0 chr1 201981116 . G . PASS END=201981118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:28,0 chr1 201981119 . C . PASS END=201981122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:31:0,63,1078:0,63,255:27,0 chr1 201981123 . T . PASS END=201981127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 201981128 . G . PASS END=201981128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr1 201981129 . A . PASS END=201981130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 201981131 . G . PASS END=201981131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 201981132 . C . PASS END=201981168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:36,0 chr1 201981169 . A . PASS END=201981169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr1 201981170 . C . PASS END=201981214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1055:0,84,255:37,0 chr1 201981215 . T . PASS END=201981216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 201981217 . G . PASS END=201981217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 201981218 . C . PASS END=201981218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr1 201981219 . G . PASS END=201981226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,80,255:26,0 chr1 201981227 . C . PASS END=201981228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 201981229 . G . PASS END=201981229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 201981230 . C . PASS END=201981232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 201981233 . T . PASS END=201981233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr1 201981234 . T . PASS END=201981235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201981236 . T . PASS END=201981236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 201981237 . G . PASS END=201981237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201981238 . C . PASS END=201981259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,894:0,72,255:26,0 chr1 201981260 . C . PASS END=201981260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 201981261 . T . PASS END=201981270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 201981271 . T . PASS END=201981271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 201981272 . G . PASS END=201981277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr1 201981278 . C . PASS END=201981293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 201981294 . C . PASS END=201981306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,677:0,60,255:21,0 chr1 201981472 . C . PASS END=201981476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 201981477 . A . PASS END=201981477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 201981478 . G . PASS END=201981484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:24,0 chr1 201981485 . T . PASS END=201981485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 201981486 . G . PASS END=201981501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,893:0,62,255:26,0 chr1 201981502 . T . PASS END=201981503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 201981504 . A . PASS END=201981504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 201981505 . T . PASS END=201981505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 201981506 . T . PASS END=201981507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 201981508 . A . PASS END=201981510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201981511 . T . PASS END=201981517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 201981518 . G . PASS END=201981521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 201981522 . G . PASS END=201981522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 201981523 . A . PASS END=201981528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 201981529 . T . PASS END=201981559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,717:0,63,255:24,0 chr1 201981560 . C . PASS END=201981564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 201981768 . A . PASS END=201981771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:19,0 chr1 201981772 . G . PASS END=201981800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:22,0 chr1 201981801 . A . PASS END=201981801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 201981802 . C . PASS END=201981806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 201981807 . G . PASS END=201981807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 201981808 . T . PASS END=201981812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 201981813 . A . PASS END=201981813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 201981814 . A . PASS END=201981814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 201981815 . G . PASS END=201981824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 201981825 . A . PASS END=201981851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr1 201981852 . C . PASS END=201981856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,572:0,35,255:13,0 chr1 201981857 . T . PASS END=201981861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 201981862 . T C, 100.25 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,12,0:0,6,0:50:138,53,0,639,53,639:255,54,0:0,0:1.0025e+02,5.0255e+01,4.0900e-05,4.5000e+02,8.5025e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,4:0,0,10,8 chr1 201981863 . G . PASS END=201981887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,660:0,54,255:18,0 chr1 201981979 . G . PASS END=201982028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,110,1535:0,110,255:40,0 chr1 201982075 . G . PASS END=201982164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1290:0,93,255:40,0 chr1 201982310 . A . PASS END=201982310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 201982311 . T . PASS END=201982311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:25,0 chr1 201982312 . G . PASS END=201982316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 201982317 . T . PASS END=201982317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 201982318 . C . PASS END=201982327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 201982328 . A . PASS END=201982328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 201982329 . G . PASS END=201982366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,928:0,84,255:29,0 chr1 201982367 . G . PASS END=201982369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 201982370 . C . PASS END=201982370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 201982371 . C . PASS END=201982371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 201982372 . C . PASS END=201982372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:26,0 chr1 201982373 . G . PASS END=201982397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,71,255:26,0 chr1 201982398 . C . PASS END=201982409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:18:0,44,675:0,44,255:18,0 chr1 201982410 . C . PASS END=201982410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 201982411 . A . PASS END=201982426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 201982957 . C . PASS END=201982987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,892:0,65,255:26,0 chr1 201982988 . C . PASS END=201982992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 201982993 . A . PASS END=201982994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 201982995 . A . PASS END=201983024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1117:0,87,255:32,0 chr1 201983025 . C . PASS END=201983025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr1 201983026 . T . PASS END=201983033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:32,0 chr1 201983034 . T . PASS END=201983034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:31,0 chr1 201983035 . G . PASS END=201983104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1160:0,88,255:38,0 chr1 201983105 . G . PASS END=201983106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1109:0,63,255:31,1 chr1 201983107 . A . PASS END=201983120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:34,0 chr1 201983121 . A . PASS END=201983121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:33,0 chr1 201983122 . T . PASS END=201983152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1186:0,83,255:33,0 chr1 201984337 . G . PASS END=201984451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:48:0,108,1660:0,108,255:40,0 chr1 202087937 . A . PASS END=202087973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:36:0,99,1451:0,104,255:40,0 chr1 202087974 . G . PASS END=202088005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1482:0,102,255:40,0 chr1 202092092 . A . PASS END=202092098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 202092099 . G . PASS END=202092099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 202092100 . G . PASS END=202092114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr1 202092115 . T . PASS END=202092115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 202092116 . G . PASS END=202092126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 202092127 . T . PASS END=202092127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 202092128 . G . PASS END=202092133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 202092134 . T . PASS END=202092134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 202092135 . T . PASS END=202092151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 202092152 . A . PASS END=202092154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 202092155 . G . PASS END=202092162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr1 202092163 . G . PASS END=202092166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 202092167 . G . PASS END=202092167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:16,0 chr1 202092168 . C . PASS END=202092169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 202092170 . C . PASS END=202092184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 202092185 . A . PASS END=202092185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 202092186 . G . PASS END=202092194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 202092195 . C . PASS END=202092204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr1 202092205 . G . PASS END=202092215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr1 202092216 . G . PASS END=202092216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 202092217 . C . PASS END=202092237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,923:0,65,255:26,0 chr1 202092238 . G . PASS END=202092242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:29,0 chr1 202092243 . A . PASS END=202092245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 202092246 . A . PASS END=202092261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr1 202092262 . G . PASS END=202092271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 202092272 . C . PASS END=202092274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 202092275 . G . PASS END=202092309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 202092310 . T . PASS END=202092310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 202092311 . G . PASS END=202092317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 202092318 . T . PASS END=202092318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:21,0 chr1 202092319 . G . PASS END=202092322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 202092323 . C . PASS END=202092328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 202092329 . A . PASS END=202092329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:24,0 chr1 202092330 . A . PASS END=202092334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 202092335 . T . PASS END=202092335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:24,0 chr1 202092336 . T . PASS END=202092337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 202092338 . G . PASS END=202092342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 202092343 . C . PASS END=202092343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 202092344 . A . PASS END=202092345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 202092346 . C . PASS END=202092346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 202092347 . A . PASS END=202092359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1119:0,87,255:32,0 chr1 202092360 . G A, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=2.918;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:8,7,0:6,10,0:48:85,0,49,600,501,1101:255,0,255:15,0:5.0000e+01,6.8598e-05,5.2368e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,11,6:8,6,9,8 chr1 202092361 . C . PASS END=202092361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 202092362 . A . PASS END=202092362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 202092363 . A . PASS END=202092384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1135:0,89,255:33,0 chr1 202092385 . T . PASS END=202092385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1115:0,44,255:27,0 chr1 202092386 . G . PASS END=202092389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 202092390 . A . PASS END=202092390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:29,0 chr1 202092391 . G . PASS END=202092392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1217:0,86,255:30,0 chr1 202092393 . A . PASS END=202092394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1119:0,63,255:31,0 chr1 202092395 . C . PASS END=202092403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr1 202092404 . A . PASS END=202092404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 202092405 . A . PASS END=202092411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:32,0 chr1 202092412 . A . PASS END=202092412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:31,0 chr1 202092413 . G . PASS END=202092414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:33,0 chr1 202092415 . A G, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.697;ReadPosRankSum=2.676;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,21,0:0.636,0.000:33:7,12,0:5,9,0:46:85,0,45,722,427,1149:255,0,255:13,0:5.0000e+01,1.1571e-04,4.7792e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,15,6:4,8,14,7 chr1 202092416 . G . PASS END=202092420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1205:0,99,255:33,0 chr1 202092421 . A . PASS END=202092421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 202092422 . G . PASS END=202092437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1302:0,89,255:33,0 chr1 202092438 . T . PASS END=202092438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:32,0 chr1 202092439 . C . PASS END=202092452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:37,0 chr1 202092453 . A . PASS END=202092542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:38:0,90,1291:0,90,255:40,0 chr1 202092543 . T . PASS END=202092579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,111,1750:0,111,255:40,0 chr1 202092580 . T C, 49.33 PASS DP=57;MQ=250.00;MQRankSum=6.449;ReadPosRankSum=3.116;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,26,0:0.456,0.000:57:17,16,0:14,10,0:48:84,0,50,929,1109,2038:255,0,255:31,0:4.9332e+01,7.2481e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,15,13,13:14,17,15,11 chr1 202092581 . G . PASS END=202092617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,141,255:40,0 chr1 202092618 . A . PASS END=202092701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:37:0,99,1485:0,111,255:40,0 chr1 202092702 . G . PASS END=202092702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:31,0 chr1 202092703 . T . PASS END=202092715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:33:0,81,1215:0,98,255:32,0 chr1 202092716 . A . PASS END=202092721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:24,0 chr1 202096869 . G . PASS END=202096870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 202096871 . C . PASS END=202096871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 202096872 . T . PASS END=202096872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 202096873 . C . PASS END=202096874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 202096875 . T . PASS END=202096875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 202096876 . C . PASS END=202096886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr1 202096887 . A . PASS END=202096887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 202096888 . C . PASS END=202096895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:17,0 chr1 202096896 . A . PASS END=202096896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 202096897 . G . PASS END=202096900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:19,0 chr1 202096901 . C . PASS END=202096904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 202096905 . G . PASS END=202096905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 202096906 . C . PASS END=202096909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 202096910 . G . PASS END=202096910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 202096911 . G . PASS END=202096983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,898:0,62,255:26,0 chr1 202096984 . T . PASS END=202096984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 202096985 . G . PASS END=202096989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 202096990 . A . PASS END=202096990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 202096991 . G . PASS END=202096995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr1 202096996 . C . PASS END=202096996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 202096997 . T . PASS END=202097009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 202097010 . G . PASS END=202097027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,712:0,44,255:19,0 chr1 202097028 . G . PASS END=202097032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 202097033 . T . PASS END=202097072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:19:0,44,675:0,44,255:19,0 chr1 202097073 . A . PASS END=202097080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202097081 . C . PASS END=202097081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 202097082 . A . PASS END=202097131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr1 202097132 . G . PASS END=202097136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:28,0 chr1 202097137 . C . PASS END=202097140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 202097141 . G . PASS END=202097142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 202097143 . T . PASS END=202097143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:28,0 chr1 202097144 . G . PASS END=202097190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1177:0,80,255:37,0 chr1 202097191 . T . PASS END=202097191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1140:0,60,255:29,0 chr1 202097192 . C . PASS END=202097201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 202097202 . A . PASS END=202097229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,931:0,64,255:26,0 chr1 202097230 . T . PASS END=202097230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,758:0,39,255:20,0 chr1 202097231 . G . PASS END=202097233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:22,0 chr1 202097234 . A . PASS END=202097234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 202097235 . T . PASS END=202097241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 202097242 . T . PASS END=202097242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 202097243 . G . PASS END=202097266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,793:0,69,255:26,0 chr1 202097267 . A . PASS END=202097267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:24,0 chr1 202097268 . G . PASS END=202097291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr1 202097292 . C . PASS END=202097293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 202097294 . G . PASS END=202097308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,67,255:24,0 chr1 202097309 . C . PASS END=202097315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 202097316 . A . PASS END=202097330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:26,0 chr1 202097331 . A . PASS END=202097334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 202097335 . T . PASS END=202097335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 202097336 . G . PASS END=202097364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1072:0,83,255:31,0 chr1 202097365 . A . PASS END=202097365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 202097366 . C . PASS END=202097381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1064:0,90,255:30,0 chr1 202097382 . G . PASS END=202097382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 202097383 . T . PASS END=202097412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1157:0,82,255:33,0 chr1 202097413 . A . PASS END=202097413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 202097414 . G . PASS END=202097420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 202097421 . G . PASS END=202097421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr1 202097422 . A . PASS END=202097432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1080:0,90,255:31,0 chr1 202097433 . C . PASS END=202097433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 202097434 . T . PASS END=202097439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 202097440 . A . PASS END=202097440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,923:0,79,255:30,0 chr1 202097441 . C . PASS END=202097443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 202097444 . G . PASS END=202097444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1162:0,61,255:29,0 chr1 202097445 . T . PASS END=202097450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:30,0 chr1 202097451 . A . PASS END=202097451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 202097452 . C . PASS END=202097464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1161:0,80,255:30,0 chr1 202097465 . C . PASS END=202097465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:29,0 chr1 202097466 . G . PASS END=202097469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:30,0 chr1 202097470 . T . PASS END=202097472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 202097473 . C . PASS END=202097474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 202097475 . C . PASS END=202097509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,71,255:26,0 chr1 202097510 . C . PASS END=202097511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 202097512 . A . PASS END=202097516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 202097517 . T . PASS END=202097523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:29,0 chr1 202097524 . A . PASS END=202097524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1102:0,30,255:28,3 chr1 202097525 . C . LowGQ END=202097527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:0:34:0,0,1059:0,0,255:30,3 chr1 202097528 . C . PASS END=202097528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1163:0,25,255:32,0 chr1 202097529 . T . PASS END=202097662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1121:0,85,255:40,0 chr1 202097663 . G . PASS END=202097684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:26,0 chr1 202103595 . T . PASS END=202103644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1260:0,108,255:40,0 chr1 202104278 . C . PASS END=202104348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:38:0,91,1330:0,91,255:40,0 chr1 202104587 . A . PASS END=202104654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,123,255:40,0 chr1 202104835 . C . PASS END=202104892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1070:0,83,255:37,0 chr1 202104893 . T . PASS END=202104893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:30,0 chr1 202104894 . C . PASS END=202104896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 202104897 . T . PASS END=202104897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,994:0,66,255:30,0 chr1 202104898 . C . PASS END=202104912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:31:0,82,1028:0,82,255:31,0 chr1 202104913 . A . PASS END=202104913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 202104914 . G . PASS END=202104916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 202104917 . T . PASS END=202104928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:25,0 chr1 202107093 . A . PASS END=202107111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,962:0,68,255:26,0 chr1 202107112 . G . PASS END=202107112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 202107113 . G . PASS END=202107116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 202107117 . T . PASS END=202107129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:29,0 chr1 202107130 . T . PASS END=202107130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 202107131 . G . PASS END=202107135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr1 202107136 . G . PASS END=202107136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 202107137 . G . PASS END=202107155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1031:0,84,255:28,0 chr1 202107156 . A . PASS END=202107166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1016:0,71,255:26,0 chr1 202107496 . C . PASS END=202107562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1148:0,83,255:38,0 chr1 202107563 . T . PASS END=202107573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,87,255:24,0 chr1 202107574 . T . PASS END=202107576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 202113578 . C . PASS END=202113593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,490:0,42,255:18,0 chr1 202113594 . A . PASS END=202113594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 202113595 . A . PASS END=202113599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 202113600 . G . PASS END=202113612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,664:0,60,255:22,0 chr1 202113613 . A . PASS END=202113613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 202113614 . C . PASS END=202113614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:22,0 chr1 202113615 . T . PASS END=202113626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 202113627 . A . PASS END=202113627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:22,0 chr1 202113628 . G . PASS END=202113638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 202113639 . A . PASS END=202113639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 202113640 . T . PASS END=202113658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 202113659 . G . PASS END=202113659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:17,0 chr1 202113660 . G . PASS END=202113666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:19,0 chr1 202113667 . A . PASS END=202113667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:16,0 chr1 202113668 . C . PASS END=202113676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:16,0 chr1 202113677 . C . PASS END=202113677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 202113678 . A . PASS END=202113683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 202113684 . T . PASS END=202113684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 202113685 . T . PASS END=202113692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 202113693 . G . PASS END=202113700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 202117734 . T . PASS END=202117742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 202117743 . G . PASS END=202117764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:25,0 chr1 202117765 . G . PASS END=202117783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1023:0,84,255:29,0 chr1 202117784 . G . PASS END=202117785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1078:0,60,255:28,0 chr1 202117786 . T . PASS END=202117794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 202117795 . T . PASS END=202117795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 202117796 . G . PASS END=202117804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 202117805 . C . PASS END=202117805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 202117806 . T . PASS END=202117819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 202117820 . T . PASS END=202117827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 202118363 . A . PASS END=202118459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:27:0,80,978:0,80,255:38,0 chr1 202118460 . A . PASS END=202118478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:25,0 chr1 202118479 . A . PASS END=202118479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 202118480 . A . PASS END=202118485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 202118486 . C . PASS END=202118500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 202119439 . C . PASS END=202119441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr1 202119442 . T . PASS END=202119442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 202119443 . C . PASS END=202119476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,770:0,62,255:26,0 chr1 202119477 . C . PASS END=202119480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 202119481 . T . PASS END=202119528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 202119529 . C . PASS END=202119530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 202119531 . G . PASS END=202119534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 202119535 . G . PASS END=202119552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 202121666 . G . PASS END=202121680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr1 202121681 . T . PASS END=202121700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:23:0,64,862:0,64,255:26,0 chr1 202121701 . C . PASS END=202121701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 202121702 . G . PASS END=202121703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 202121704 . C . PASS END=202121725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:30,0 chr1 202121726 . C . PASS END=202121726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:25,0 chr1 202121727 . T . PASS END=202121734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 202121735 . T . PASS END=202121735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 202121736 . A . PASS END=202121739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:30,0 chr1 202121740 . G . PASS END=202121741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1044:0,77,255:31,0 chr1 202121742 . A . PASS END=202121749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1119:0,82,255:33,0 chr1 202121750 . C . PASS END=202121750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1172:0,71,255:30,0 chr1 202121751 . C . PASS END=202121755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1105:0,83,255:31,0 chr1 202121756 . T . PASS END=202121756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1176:0,69,255:30,0 chr1 202121757 . G . PASS END=202121784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1164:0,83,255:32,0 chr1 202121785 . C . PASS END=202121825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,825:0,61,255:26,0 chr1 202121826 . T . PASS END=202121826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:20,0 chr1 202121827 . A . PASS END=202121827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 202122853 . C . PASS END=202122978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:31:0,93,1097:0,93,255:40,0 chr1 202123314 . C . PASS END=202123446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:36:0,96,1440:0,107,255:40,0 chr1 202123447 . T . PASS END=202123451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:26,0 chr1 202124661 . T . PASS END=202124661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr1 202124662 . C . PASS END=202124662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 202124663 . G . PASS END=202124668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 202124669 . A . PASS END=202124669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,706:0,25,255:21,0 chr1 202124670 . G . PASS END=202124671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,799:0,58,255:23,0 chr1 202124672 . T . PASS END=202124675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:24,0 chr1 202124676 . A . PASS END=202124676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 202124677 . T . PASS END=202124678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 202124679 . G . PASS END=202124679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:25,0 chr1 202124680 . A . PASS END=202124688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:26,0 chr1 202124689 . C . PASS END=202124689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:25,0 chr1 202124690 . C . PASS END=202124692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 202124693 . C . PASS END=202124696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 202124697 . C . PASS END=202124697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 202124698 . T . PASS END=202124700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 202124701 . C . PASS END=202124701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 202124702 . T . PASS END=202124703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 202124704 . T . PASS END=202124713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1084:0,74,255:26,0 chr1 202124714 . C . PASS END=202124714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,866:0,53,255:24,0 chr1 202124715 . T . PASS END=202124736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,907:0,64,255:25,0 chr1 202124737 . T . PASS END=202124737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:23,0 chr1 202126867 . T . PASS END=202126867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr1 202126868 . T . PASS END=202126868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 202126869 . G . PASS END=202126877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,825:0,72,255:25,0 chr1 202126878 . G . PASS END=202126935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1057:0,86,255:34,0 chr1 202126936 . A . PASS END=202126936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1086:0,55,255:30,0 chr1 202126937 . G . PASS END=202126951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1225:0,89,255:35,0 chr1 202127246 . C . PASS END=202127265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr1 202127266 . G . PASS END=202127266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 202127267 . C . PASS END=202127267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 202127268 . T . PASS END=202127282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr1 202127283 . T . PASS END=202127284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 202127285 . G . PASS END=202127356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,817:0,62,255:26,0 chr1 202127357 . G . PASS END=202127359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202127360 . C . PASS END=202127391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,886:0,65,255:26,0 chr1 202127392 . A . PASS END=202127392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 202127393 . C . PASS END=202127402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,837:0,69,255:23,0 chr1 202127403 . A . PASS END=202127403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 202127404 . G . PASS END=202127422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,884:0,69,255:23,0 chr1 202127423 . G . PASS END=202127423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 202127424 . C . PASS END=202127424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202127425 . C . PASS END=202127444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 202128409 . C . PASS END=202128424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 202128425 . C . PASS END=202128425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 202128426 . A . PASS END=202128450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:25,0 chr1 202128451 . G . PASS END=202128453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 202128454 . G . PASS END=202128463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 202128464 . T . PASS END=202128471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 202128472 . G . PASS END=202128500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 202128501 . T . PASS END=202128501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:20,0 chr1 202128502 . C . PASS END=202128507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 202128508 . C . PASS END=202128523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr1 202128524 . G . PASS END=202128524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,606:0,13,255:14,0 chr1 202128525 . G . PASS END=202128531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 202128532 . C . PASS END=202128535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 202128536 . G . PASS END=202128560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 202128561 . C . PASS END=202128561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 202128562 . T . PASS END=202128562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 202128563 . C . PASS END=202128563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 202128564 . A . PASS END=202128566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 202128567 . C . PASS END=202128568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 202128569 . G . PASS END=202128569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr1 202128570 . C . PASS END=202128573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 202128574 . G . PASS END=202128574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 202128575 . A . PASS END=202128576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 202128577 . G . PASS END=202128577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 202128578 . T . PASS END=202128584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 202128585 . G . PASS END=202128585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 202128586 . A . PASS END=202128589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 202128590 . A . PASS END=202128614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 202128615 . G . PASS END=202128647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,250:0,24,250:9,0 chr1 202129673 . T . PASS END=202129688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 202129689 . C . PASS END=202129694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 202129695 . C . PASS END=202129695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 202129696 . T . PASS END=202129707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr1 202129708 . G . PASS END=202129708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,1 chr1 202129709 . C . PASS END=202129713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,611:0,22,255:21,1 chr1 202129714 . T . PASS END=202129728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:23,0 chr1 202129729 . C . PASS END=202129730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 202129731 . G . PASS END=202129768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr1 202129769 . C . PASS END=202129769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:22,0 chr1 202129770 . T . PASS END=202129783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 202129784 . C . PASS END=202129786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 202129787 . G . PASS END=202129788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 202129789 . T . PASS END=202129789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 202129790 . G . PASS END=202129790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 202129791 . C . PASS END=202129791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 202129792 . C . PASS END=202129795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 202129796 . C . PASS END=202129797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 202129798 . C . PASS END=202129799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 202129800 . C . PASS END=202129800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 202129801 . A . PASS END=202129803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 202129804 . C . PASS END=202129808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,751:0,50,255:19,0 chr1 202129809 . G . PASS END=202129812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202129813 . C . PASS END=202129813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:19,0 chr1 202129814 . A . PASS END=202129814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 202129815 . T . PASS END=202129815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202129816 . T . PASS END=202129854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,643:0,41,255:19,0 chr1 202129855 . G . PASS END=202129855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 202129856 . G . PASS END=202129858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 202129859 . G . PASS END=202129859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 202129860 . C . PASS END=202129872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,607:0,51,255:17,0 chr1 202129873 . C . PASS END=202129883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,35,255:13,0 chr1 202129884 . C . PASS END=202129884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 202129885 . C . PASS END=202129905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 202129906 . A . PASS END=202129907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 202129908 . G . PASS END=202129908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr1 202129909 . G . PASS END=202129911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr1 202129912 . G . PASS END=202129912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr1 202129913 . A . PASS END=202129925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:8,0 chr1 202129926 . T . PASS END=202129926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:6,0 chr1 202129927 . C . PASS END=202129935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 202130515 . A . PASS END=202130519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 202130520 . G . PASS END=202130652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1015:0,81,255:40,0 chr1 202130653 . C . PASS END=202130662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:25,0 chr1 202130663 . G . PASS END=202130672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,71,255:24,0 chr1 202130673 . A . PASS END=202130676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 202130677 . C . PASS END=202130681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202130682 . G . PASS END=202130699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,43,255:19,0 chr1 202130700 . G A, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=0.857;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:4,4,0:5,6,0:48:85,0,50,342,321,662:255,0,255:6,0:5.0000e+01,6.5751e-05,5.2888e+01,3.4154e+02,3.5553e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,8,3,7:6,3,5,5 chr1 202130701 . C . PASS END=202130703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 202163118 . A . PASS END=202163123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 202163124 . A . LowGQ END=202163124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 202163125 . G . PASS END=202163144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr1 202163145 . C . PASS END=202163147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 202163148 . T . PASS END=202163149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 202163150 . G . PASS END=202163161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 202163162 . G . PASS END=202163164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 202163165 . G . PASS END=202163189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 202163190 . G . LowGQ END=202163190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr1 202163191 . C . PASS END=202163202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,244:0,27,244:9,0 chr1 202163203 . G . PASS END=202163216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr1 202163217 . G . PASS END=202163217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 202163218 . C . PASS END=202163219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 202163220 . T . PASS END=202163235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,260:0,27,255:9,0 chr1 202163236 . A . PASS END=202163248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr1 202163249 . C . PASS END=202163249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 202163250 . G . PASS END=202163258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:12,0 chr1 202163259 . C . PASS END=202163259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 202163260 . T . PASS END=202163294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 202163295 . G . PASS END=202163295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 202163296 . T . PASS END=202163303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,360:0,33,255:11,0 chr1 202163304 . G . PASS END=202163329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 202172948 . A . PASS END=202172962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1305:0,95,255:38,0 chr1 202172963 . T C, 49.25 PASS DP=38;MQ=248.45;MQRankSum=4.639;ReadPosRankSum=2.466;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,17,0:0.447,0.000:38:11,9,0:10,8,0:47:84,0,47,184,184,184:255,0,255:21,0:4.9251e+01,9.5003e-05,5.0000e+01,1.8402e+02,2.1879e+02,1.8703e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,8,8,9:11,10,6,11 chr1 202172964 . T . PASS END=202172993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1277:0,87,255:39,0 chr1 202172994 . T . PASS END=202172994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1112:0,70,255:36,0 chr1 202172995 . C . PASS END=202173000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 202173001 . C . PASS END=202173003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:37,0 chr1 202183283 . A . PASS END=202183307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,102,1438:0,102,255:40,0 chr1 202183308 . C T, 50.00 PASS DP=43;MQ=247.43;MQRankSum=5.528;ReadPosRankSum=2.254;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,22,0:0.524,0.000:42:10,13,0:10,9,0:47:85,0,47,185,185,185:255,0,255:21,0:5.0000e+01,8.7237e-05,4.9957e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,7,12,10:7,13,11,11 chr1 202183309 . A . PASS END=202183345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,104,1387:0,104,255:40,0 chr1 202183346 . G . PASS END=202183365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,95,255:37,0 chr1 202194551 . G . PASS END=202194622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,99,1485:0,99,255:40,0 chr1 202197064 . G . PASS END=202197123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:91:43:0,91,1527:0,91,255:40,0 chr1 202197124 . C . PASS END=202197135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,107,1512:0,107,255:40,0 chr1 202205050 . G . PASS END=202205055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 202205056 . G . PASS END=202205057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202205058 . A . PASS END=202205058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 202205059 . G . PASS END=202205063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr1 202205064 . A . PASS END=202205064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 202205065 . T . PASS END=202205069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:30,0 chr1 202205070 . T . PASS END=202205070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr1 202205071 . G . PASS END=202205079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 202205080 . C . PASS END=202205086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr1 202205087 . G . PASS END=202205092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 202205093 . C . PASS END=202205093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 202205094 . T . PASS END=202205113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr1 202205114 . C . PASS END=202205121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 202205767 . A . PASS END=202205792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,105,1549:0,110,255:40,0 chr1 202245434 . G . PASS END=202245435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 202245436 . G . PASS END=202245436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 202245437 . C . PASS END=202245451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,892:0,72,255:26,0 chr1 202245452 . C . PASS END=202245467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:29,0 chr1 202245468 . G . PASS END=202245468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 202245469 . A . PASS END=202245473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 202245474 . A . PASS END=202245474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 202245475 . G . PASS END=202245478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 202245479 . T . PASS END=202245479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 202245480 . G . PASS END=202245499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1155:0,80,255:30,0 chr1 202245500 . C . PASS END=202245500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1015:0,49,255:26,0 chr1 202245501 . C . PASS END=202245504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 202245505 . T . PASS END=202245505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 202245506 . C . PASS END=202245507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1096:0,90,255:30,0 chr1 202245508 . G . PASS END=202245508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 202245509 . G . PASS END=202245533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1178:0,86,255:32,0 chr1 202245534 . A . PASS END=202245534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 202245535 . T . PASS END=202245546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1216:0,83,255:32,0 chr1 202245547 . C . PASS END=202245547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:31,0 chr1 202245548 . C . PASS END=202245567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1194:0,83,255:36,0 chr1 202245568 . T . PASS END=202245568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 202245569 . G . PASS END=202245643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,86,255:39,0 chr1 202245644 . G . PASS END=202245649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 202249909 . G . PASS END=202249980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:38:0,89,1575:0,89,255:40,0 chr1 202266636 . A . PASS END=202266644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:49:0,120,1746:0,120,255:40,0 chr1 202266645 . T . PASS END=202266704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,132,255:40,0 chr1 202269977 . G . PASS END=202270041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1322:0,81,255:40,0 chr1 202270042 . A . PASS END=202270042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:29,0 chr1 202270043 . G . PASS END=202270048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr1 202270292 . A . PASS END=202270363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:43:0,96,1458:0,96,255:40,0 chr1 202272407 . A . PASS END=202272475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,136,255:40,0 chr1 202273687 . G . PASS END=202273687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 202273688 . A . PASS END=202273691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 202273692 . T . PASS END=202273692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 202273693 . G . PASS END=202273693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 202273694 . A . PASS END=202273694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr1 202273695 . C . PASS END=202273696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 202273697 . C . PASS END=202273697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 202273698 . G . PASS END=202273698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,975:0,18,255:27,0 chr1 202273699 . C . PASS END=202273699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 202273700 . G . PASS END=202273701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr1 202273702 . A . PASS END=202273702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 202273703 . G . PASS END=202273703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 202273704 . G . PASS END=202273705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1127:0,93,255:32,0 chr1 202273706 . A . PASS END=202273706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:31,0 chr1 202273707 . T . PASS END=202273707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr1 202273708 . C . PASS END=202273708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1225:0,96,255:32,0 chr1 202273709 . C . PASS END=202273709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:33,0 chr1 202273710 . G . PASS END=202273712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:34,0 chr1 202273713 . T . PASS END=202273713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 202273714 . G . PASS END=202273750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1150:0,85,255:33,0 chr1 202273751 . C . PASS END=202273754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 202273755 . T . PASS END=202273758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 202274812 . G . PASS END=202274877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,111,1690:0,111,255:40,0 chr1 202275057 . A . PASS END=202275118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,100,1737:0,100,255:40,0 chr1 202275893 . G . PASS END=202275897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 202275898 . G . PASS END=202275905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:21,0 chr1 202275906 . C . PASS END=202275906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 202275907 . T . PASS END=202275925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,815:0,63,255:23,0 chr1 202275926 . T . PASS END=202275926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 202275927 . G . PASS END=202275937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:26,0 chr1 202275938 . A . PASS END=202275938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 202275939 . T . PASS END=202275940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 202275941 . G . PASS END=202275951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 202275952 . G . PASS END=202275952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 202275953 . G . PASS END=202275959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 202275996 . C . PASS END=202276067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1235:0,84,255:40,0 chr1 202276458 . G . PASS END=202276493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1219:0,89,255:38,0 chr1 202276494 . C T, 50.00 PASS DP=40;MQ=249.85;MQRankSum=4.870;ReadPosRankSum=2.079;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:10,11,0:7,12,0:47:85,0,48,812,606,1418:255,0,255:16,0:5.0000e+01,7.7659e-05,5.1042e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,13,10:10,7,9,14 chr1 202276495 . G . PASS END=202276529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1163:0,80,255:38,0 chr1 202278179 . G . PASS END=202278276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,119,1598:0,119,255:40,0 chr1 202278277 . T . PASS END=202278277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:40:46:0,40,1171:0,40,255:37,0 chr1 202278278 . C . PASS END=202278304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,108,1501:0,115,255:40,0 chr1 202279325 . G . PASS END=202279325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 202279326 . A . PASS END=202279326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 202279327 . T . PASS END=202279327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 202279328 . C . PASS END=202279330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 202279331 . G . PASS END=202279331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 202279332 . G . PASS END=202279342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,894:0,62,255:28,0 chr1 202279343 . T . PASS END=202279343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 202279344 . G . PASS END=202279345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,958:0,48,255:28,0 chr1 202279346 . C . PASS END=202279348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 202279349 . C . PASS END=202279349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 202279350 . C . PASS END=202279380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:30:0,80,1088:0,80,255:34,0 chr1 202279381 . T . PASS END=202279381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1086:0,55,255:29,0 chr1 202279382 . C . PASS END=202279410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1119:0,80,255:31,0 chr1 202279411 . A . PASS END=202279411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 202279412 . A . PASS END=202279425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 202279426 . A . PASS END=202279429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1061:0,71,255:27,0 chr1 202279430 . T . PASS END=202279433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 202279434 . G . PASS END=202279450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,964:0,68,255:26,0 chr1 202279451 . C . PASS END=202279451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr1 202279452 . C . PASS END=202279457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:22,0 chr1 202279458 . C . PASS END=202279458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 202279459 . T . PASS END=202279470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:25,0 chr1 202279471 . A . PASS END=202279471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 202279472 . A . PASS END=202279472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 202279473 . G . PASS END=202279473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 202279474 . C . PASS END=202279474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 202279475 . A . PASS END=202279476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 202279477 . A . PASS END=202279481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,886:0,61,255:21,0 chr1 202279482 . C . PASS END=202279483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 202279484 . C . PASS END=202279485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 202283930 . A . PASS END=202283943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:32:0,93,1274:0,96,255:37,0 chr1 202283944 . G . PASS END=202283944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr1 202283945 . A . PASS END=202283996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:37:0,82,1350:0,82,255:40,0 chr1 202283997 . T . PASS END=202283997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:28,0 chr1 202283998 . A . PASS END=202284005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1241:0,86,255:30,0 chr1 202284006 . T . PASS END=202284007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 202284008 . C . PASS END=202284009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 202284010 . G . PASS END=202284010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 202287080 . G . PASS END=202287088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:19,0 chr1 202287089 . A . PASS END=202287089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 202287090 . G . PASS END=202287090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 202287091 . C . PASS END=202287118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr1 202287119 . G . PASS END=202287132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,908:0,72,255:26,0 chr1 202287133 . G . PASS END=202287155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:30,0 chr1 202287156 . C T, 49.23 PASS DP=29;MQ=249.63;MQRankSum=4.539;ReadPosRankSum=3.574;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,13,0:0.448,0.000:29:8,8,0:8,5,0:48:84,0,50,428,572,1000:255,0,255:16,0:4.9225e+01,7.3776e-05,5.3000e+01,4.2800e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,7,6:8,8,2,11 chr1 202287157 . G . PASS END=202287158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 202287159 . G . PASS END=202287159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 202287160 . C . PASS END=202287160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 202287161 . T . PASS END=202287166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 202287167 . A . PASS END=202287167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 202287168 . T . PASS END=202287172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 202287173 . T . PASS END=202287173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 202287174 . G . PASS END=202287177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 202287178 . C . PASS END=202287178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:27,0 chr1 202287179 . T . PASS END=202287179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 202287180 . G . PASS END=202287180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 202287181 . C . PASS END=202287181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202287182 . T . PASS END=202287205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:25,0 chr1 202287206 . T C, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,13,0:0,12,0:72:160,75,0,938,75,938:255,78,0:0,0:1.2178e+02,7.1780e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,13:0,0,12,13 chr1 202287207 . C . PASS END=202287220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr1 202287221 . T . PASS END=202287221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 202287222 . C . PASS END=202287222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 202287223 . A . PASS END=202287224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,770:0,52,255:19,0 chr1 202287225 . G . PASS END=202287226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,71,255:20,0 chr1 202287227 . T . PASS END=202287229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 202287230 . T . PASS END=202287233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 202287234 . A . PASS END=202287234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 202287235 . G . PASS END=202287243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202287244 . G . PASS END=202287276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 202287277 . G . PASS END=202287282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:16:0,27,405:0,31,255:9,0 chr1 202287283 . C . PASS END=202287288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:11,0 chr1 202287289 . T . LowGQ END=202287289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 202287290 . C . PASS END=202287294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 202287295 . G . PASS END=202287296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 202287297 . T . PASS END=202287297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 202287298 . G . PASS END=202287300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 202287301 . C . PASS END=202287308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,427:0,33,255:13,0 chr1 202287309 . T . PASS END=202287332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:16,0 chr1 202287333 . C . PASS END=202287335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 202287336 . C . PASS END=202287336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 202287337 . T . PASS END=202287337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 202287338 . G . PASS END=202287342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 202287343 . A . PASS END=202287370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 202287371 . T . PASS END=202287390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 202287391 . G . PASS END=202287394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 202287395 . C . PASS END=202287401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 202287402 . G . PASS END=202287402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 202287403 . C . PASS END=202287419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 202287420 . C . PASS END=202287439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 202287440 . C . PASS END=202287440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 202287441 . C . PASS END=202287474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:12:0,32,421:0,32,255:13,0 chr1 202287475 . T . PASS END=202287499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:16,0 chr1 202287500 . T . PASS END=202287523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr1 202287524 . G . PASS END=202287536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 202287537 . G A, 49.38 PASS DP=14;MQ=250.00;MQRankSum=3.034;ReadPosRankSum=0.968;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,6,0:0.429,0.000:14:4,2,0:4,4,0:48:84,0,50,214,286,500:190,0,255:8,0:4.9376e+01,7.1964e-05,5.3000e+01,2.1382e+02,3.2084e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,2,3,3:4,4,3,3 chr1 202287538 . C . PASS END=202287539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 202287540 . G . PASS END=202287542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 202287543 . C . PASS END=202287553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 202287554 . T . PASS END=202287574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:17,0 chr1 202287575 . C . PASS END=202287577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 202287578 . T . PASS END=202287578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 202287579 . C . PASS END=202287621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,651:0,51,255:19,0 chr1 202287622 . G . PASS END=202287625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 202287626 . T . PASS END=202287627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 202287628 . A . PASS END=202287629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202287630 . C . PASS END=202287633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 202287634 . G . PASS END=202287637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 202287638 . T . PASS END=202287639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,745:0,49,255:21,0 chr1 202287640 . G . PASS END=202287645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 202287646 . A . PASS END=202287646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:20,0 chr1 202287647 . T . PASS END=202287647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 202287648 . G . PASS END=202287648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 202287649 . A . PASS END=202287649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202287650 . A . PASS END=202287650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 202287651 . C . PASS END=202287654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202287655 . T . PASS END=202287655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 202287656 . T . PASS END=202287657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,706:0,46,255:19,0 chr1 202287658 . T . PASS END=202287660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 202287661 . T . PASS END=202287662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr1 202287663 . C . PASS END=202287670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr1 202287671 . T . PASS END=202287672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 202287673 . G . PASS END=202287674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 202287675 . C . PASS END=202287675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr1 202287676 . G . PASS END=202287676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202287677 . G . PASS END=202287679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 202287680 . C . PASS END=202287684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 202287685 . A . PASS END=202287685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:22,0 chr1 202287686 . T . PASS END=202287689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:25,0 chr1 202287690 . A . PASS END=202287690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,718:0,58,255:24,0 chr1 202287691 . C . PASS END=202287693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 202287694 . T . PASS END=202287695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 202287696 . C . PASS END=202287713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr1 202287714 . C . PASS END=202287714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 202287715 . G . PASS END=202287716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:24,0 chr1 202287717 . C . PASS END=202287723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,856:0,75,255:25,0 chr1 202287724 . G . PASS END=202287724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 202287725 . C . PASS END=202287747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,61,255:25,0 chr1 202287748 . A . PASS END=202287748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 202287749 . G . PASS END=202287753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 202287754 . G A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=3.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,15,0:0.577,0.000:26:5,6,0:6,9,0:48:85,0,49,507,393,901:255,0,255:11,0:5.0000e+01,7.2222e-05,5.1777e+01,4.5000e+02,4.2804e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,10,5:3,8,5,10 chr1 202287755 . T . PASS END=202287762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,925:0,78,255:26,0 chr1 202287763 . C . PASS END=202287769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202287770 . T . PASS END=202287772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 202287773 . C . PASS END=202287778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202287779 . G . PASS END=202287780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 202287781 . C . PASS END=202287812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:35,0 chr1 202287813 . T C, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,14,0:0,21,0:102:190,105,0,1357,105,1357:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,14:0,0,18,17 chr1 202287814 . G . PASS END=202287819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:34,0 chr1 202287820 . A . PASS END=202287820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr1 202287821 . T . PASS END=202287850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:36:0,92,1286:0,92,255:40,0 chr1 202287851 . C . PASS END=202287944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:33:0,86,1305:0,86,255:40,0 chr1 202287945 . T . PASS END=202287945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 202287946 . C . PASS END=202287961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 202287962 . G . PASS END=202287976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,84,255:26,0 chr1 202287977 . G . PASS END=202287978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 202287979 . C . PASS END=202287980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 202287981 . C . PASS END=202287983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 202287984 . A . PASS END=202287991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:23,0 chr1 202287992 . C . PASS END=202287992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 202287993 . T . PASS END=202288001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 202288002 . G . PASS END=202288006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 202288007 . T . PASS END=202288011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 202288012 . A . PASS END=202288012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:20,0 chr1 202288013 . A . PASS END=202288042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 202288043 . T . PASS END=202288043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 202288044 . A . PASS END=202288096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,898:0,62,255:26,0 chr1 202288097 . C . PASS END=202288098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 202288099 . G . PASS END=202288101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 202288102 . C . PASS END=202288139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,706:0,46,255:19,0 chr1 202288140 . C . PASS END=202288144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 202288145 . A . PASS END=202288147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 202288148 . A . PASS END=202288156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 202288157 . C . PASS END=202288157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 202288158 . C . PASS END=202288180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 202288181 . G . PASS END=202288181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 202288182 . T . PASS END=202288182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 202288183 . G . PASS END=202288183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 202288184 . T . PASS END=202288184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 202288185 . A . PASS END=202288192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 202288193 . A . PASS END=202288193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 202288194 . G . PASS END=202288199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 202288200 . C . PASS END=202288200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 202288201 . C . PASS END=202288224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1164:0,83,255:33,0 chr1 202288225 . A . PASS END=202288225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1049:0,60,255:31,0 chr1 202288226 . T . PASS END=202288229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 202288230 . T . PASS END=202288230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr1 202288231 . G . PASS END=202288232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 202288233 . A . PASS END=202288233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:30,0 chr1 202288234 . G . PASS END=202288243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1164:0,83,255:34,0 chr1 202288244 . T . PASS END=202288244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:32,0 chr1 202288245 . G . PASS END=202288255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1258:0,102,255:34,0 chr1 202288256 . G . PASS END=202288292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1241:0,89,255:35,0 chr1 202288293 . C T, 49.90 PASS DP=33;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=-0.378;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,16,0:0.485,0.000:33:10,8,0:7,8,0:48:85,0,50,543,608,1151:255,0,255:17,0:4.9904e+01,6.6269e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,10,6:10,7,6,10 chr1 202288294 . G . PASS END=202288294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 202288295 . G . PASS END=202288302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr1 202288303 . C . PASS END=202288303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:21,0 chr1 202288304 . C . PASS END=202288324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,813:0,66,255:22,0 chr1 202288325 . C . PASS END=202288325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 202288326 . A . PASS END=202288326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202288327 . C . PASS END=202288330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:17,0 chr1 202288331 . T . PASS END=202288335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:17,0 chr1 202300963 . C . PASS END=202301088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:88:45:0,88,1575:0,88,255:40,0 chr1 202302138 . C . PASS END=202302221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,138,255:40,0 chr1 202302365 . T . PASS END=202302463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,134,255:40,0 chr1 202302578 . T . PASS END=202302683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,142,255:40,0 chr1 202304112 . C . PASS END=202304112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 202304117 . C . PASS END=202304186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,108,1620:0,132,255:40,0 chr1 202304770 . C . PASS END=202304830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,127,255:40,0 chr1 202304831 . G . PASS END=202304867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,118,1800:0,118,255:40,0 chr1 202304868 . T C, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=2.670;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:11,15,0:13,10,0:48:85,0,50,865,858,1724:255,0,255:22,0:5.0000e+01,6.5233e-05,5.2975e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,16,8,17:15,9,14,11 chr1 202304869 . G . PASS END=202304882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,108,1564:0,108,255:40,0 chr1 202317980 . A . PASS END=202317985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 202317986 . G . PASS END=202317995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 202317996 . A . PASS END=202318011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 202318012 . G . PASS END=202318018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 202318019 . T . PASS END=202318019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:13,0 chr1 202318020 . C . PASS END=202318083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,505:0,45,255:19,0 chr1 202318084 . T . PASS END=202318084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 202318085 . G . PASS END=202318105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,637:0,54,255:18,0 chr1 202318106 . C . PASS END=202318106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 202318107 . G . PASS END=202318125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 202318126 . C . PASS END=202318130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 202318131 . G . PASS END=202318135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 202318136 . A . PASS END=202318146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 202318147 . C . PASS END=202318152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 202318153 . C . PASS END=202318154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 202318155 . G . PASS END=202318172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,599:0,51,255:17,0 chr1 202318173 . C . PASS END=202318173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 202318174 . C . PASS END=202318203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr1 202318204 . A . PASS END=202318204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr1 202318205 . A . PASS END=202318227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 202318228 . T . PASS END=202318228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr1 202318229 . A . PASS END=202318241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 202318242 . A . PASS END=202318242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,468:0,31,255:14,0 chr1 202318243 . C . PASS END=202318254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 202318255 . G . PASS END=202318258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 202318259 . G . PASS END=202318259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 202318260 . C . PASS END=202318270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,435:0,36,255:12,0 chr1 202385915 . G . PASS END=202386035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:39:0,81,1215:0,117,255:40,0 chr1 202386036 . A . PASS END=202386037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 202386038 . A . PASS END=202386045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:29:0,60,900:0,83,255:24,0 chr1 202391748 . G . PASS END=202391866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,116,1562:0,116,255:40,0 chr1 202394694 . G . PASS END=202394709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,767:0,60,255:26,0 chr1 202394710 . G . PASS END=202394753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,904:0,81,255:30,0 chr1 202394754 . A . PASS END=202394755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 202394756 . T . PASS END=202394781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1094:0,90,255:30,0 chr1 202394782 . T . PASS END=202394793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1014:0,68,255:27,0 chr1 202394794 . T . PASS END=202394796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202394797 . C . PASS END=202394813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:25,0 chr1 202394814 . T . PASS END=202394814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 202394815 . T . PASS END=202394834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 202394835 . G . PASS END=202394839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,50,255:19,0 chr1 202394840 . T . PASS END=202394840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:14,0 chr1 202394841 . C . PASS END=202394853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 202396168 . A . PASS END=202396169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,854:0,68,255:27,0 chr1 202396170 . T . PASS END=202396310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1048:0,84,255:40,0 chr1 202396311 . T . PASS END=202396312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr1 202397983 . G . PASS END=202398030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1211:0,99,255:38,0 chr1 202398031 . G . PASS END=202398031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:33,0 chr1 202398032 . A . PASS END=202398057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1225:0,86,255:35,0 chr1 202399859 . C . PASS END=202399938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,121,255:40,0 chr1 202400608 . C . PASS END=202400610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 202400611 . A . PASS END=202400611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,981:0,79,255:29,0 chr1 202400612 . G . PASS END=202400747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:31:0,87,1305:0,93,255:40,0 chr1 202403784 . A . PASS END=202403896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,99,1621:0,99,255:40,0 chr1 202406949 . T . PASS END=202406952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,698:0,57,255:19,0 chr1 202406953 . C . PASS END=202406964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 202406965 . T . PASS END=202406965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 202406966 . T . PASS END=202406969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr1 202406970 . A . PASS END=202406970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 202406971 . A . PASS END=202406979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 202406980 . A . PASS END=202406980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:21,0 chr1 202406981 . G . PASS END=202406988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 202406989 . A . PASS END=202406998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 202406999 . T . PASS END=202406999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 202407000 . T . PASS END=202407007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 202407008 . G . PASS END=202407009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 202407010 . G . PASS END=202407081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1114:0,89,255:35,0 chr1 202407082 . A . PASS END=202407084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1268:0,72,255:35,0 chr1 202407085 . G . PASS END=202407146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:36:0,96,1382:0,96,255:40,0 chr1 202407147 . G . PASS END=202407188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:38:0,87,1289:0,87,255:36,0 chr1 202407189 . G . LowGQ END=202407190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,7:38:0:38:0,0,910:80,0,255:31,7 chr1 202407191 . T . PASS END=202407191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr1 202407192 . T . PASS END=202407220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1093:0,80,255:35,0 chr1 202407221 . A . PASS END=202407221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr1 202407222 . A . PASS END=202407222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 202407223 . C . PASS END=202407232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:25,0 chr1 202407233 . T . PASS END=202407237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 202407238 . T . PASS END=202407240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:47:25:0,47,825:0,47,255:24,0 chr1 202407241 . A . PASS END=202407242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 202409834 . G . PASS END=202409836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 202409837 . A . PASS END=202409916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,120,1800:0,123,255:40,0 chr1 202411575 . A . PASS END=202411576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 202411577 . A . PASS END=202411577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:28,0 chr1 202411578 . A . PASS END=202411581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 202411582 . G . PASS END=202411582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:29,0 chr1 202411583 . C . PASS END=202411583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 202411584 . T . PASS END=202411584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1043:0,60,255:29,0 chr1 202411585 . G . PASS END=202411589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1143:0,80,255:32,0 chr1 202411590 . T . PASS END=202411590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1070:0,57,255:31,0 chr1 202411591 . C . PASS END=202411591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 202411592 . T . PASS END=202411592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 202411593 . A . PASS END=202411700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:85:33:0,85,1188:0,85,255:40,0 chr1 202412215 . A . PASS END=202412230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,184,255:40,0 chr1 202414174 . T . PASS END=202414225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1210:0,86,255:40,0 chr1 202414226 . C . PASS END=202414226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1528:0,63,255:39,0 chr1 202414227 . G . PASS END=202414298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:41:0,96,1488:0,96,255:40,0 chr1 202414299 . C . PASS END=202414299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1424:0,77,255:39,0 chr1 202414300 . C . PASS END=202414329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1085:0,80,255:40,0 chr1 202414330 . C . PASS END=202414336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1035:0,77,255:25,0 chr1 202414337 . G . PASS END=202414353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:18:0,42,630:0,54,255:19,0 chr1 202414354 . C . PASS END=202414356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 202418117 . G . PASS END=202418284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:33:0,84,1181:0,88,255:40,0 chr1 202418285 . C . PASS END=202418299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:27:0,63,945:0,73,255:26,0 chr1 202457661 . G . PASS END=202457751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,101,1434:0,101,255:40,0 chr1 202462242 . G . PASS END=202462258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,892:0,68,255:26,0 chr1 202462259 . C . PASS END=202462259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202462260 . C . PASS END=202462260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:26,0 chr1 202462261 . T . PASS END=202462265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 202462266 . G . PASS END=202462266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 202462267 . A . PASS END=202462273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,935:0,81,255:28,0 chr1 202462274 . A . PASS END=202462274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 202462275 . A . PASS END=202462290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr1 202462291 . C . PASS END=202462292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 202462293 . A . PASS END=202462301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 202462302 . A . PASS END=202462302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:28,0 chr1 202462303 . G . PASS END=202462340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1255:0,86,255:33,0 chr1 202462341 . A . PASS END=202462341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,978:0,60,255:27,0 chr1 202462342 . C . PASS END=202462345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 202462346 . A . PASS END=202462347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 202462348 . G . PASS END=202462378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:31,0 chr1 202462379 . C . PASS END=202462379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr1 202462380 . T . PASS END=202462397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1133:0,93,255:31,0 chr1 202462398 . G . PASS END=202462398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 202462399 . A . PASS END=202462407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 202462408 . A . PASS END=202462408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 202462409 . G . PASS END=202462413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 202462414 . A . PASS END=202462414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 202462415 . G . PASS END=202462415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 202462416 . C . PASS END=202462418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 202462419 . C . PASS END=202462423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 202462424 . G . PASS END=202462424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 202462425 . G . PASS END=202462437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 202462438 . A . PASS END=202462445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,994:0,70,255:25,0 chr1 202464421 . C . PASS END=202464432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:92:33:0,92,1294:0,92,255:35,0 chr1 202464433 . C . PASS END=202464433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr1 202464434 . G . PASS END=202464592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:36:0,90,1310:0,90,255:40,0 chr1 202464593 . A . PASS END=202464593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1038:0,52,255:30,0 chr1 202464594 . G . PASS END=202464610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:92:34:0,92,1227:0,92,255:34,0 chr1 202464698 . A . PASS END=202464713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 202464714 . T . PASS END=202464715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 202464716 . T . PASS END=202464810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1178:0,83,255:40,0 chr1 202465909 . G . PASS END=202465950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,165,255:40,0 chr1 202470987 . C . PASS END=202471007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:39:0,95,1388:0,95,255:40,0 chr1 202509268 . A . PASS END=202509369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,105,1575:0,116,255:40,0 chr1 202528005 . C . PASS END=202528021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:111:0,120,1800:0,255,255:40,0 chr1 202531906 . G . PASS END=202531926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,576:0,41,255:19,0 chr1 202531927 . T . PASS END=202531998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,723:0,60,255:26,0 chr1 202531999 . A . PASS END=202531999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 202532000 . G . PASS END=202532018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:25,0 chr1 202532019 . T . PASS END=202532037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:19:0,46,698:0,46,255:19,0 chr1 202532038 . A . PASS END=202532038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 202532039 . G . PASS END=202532050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:18,0 chr1 202533571 . C . PASS END=202533675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:83:50:0,83,1485:0,83,255:40,0 chr1 202536906 . C . PASS END=202536959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,113,1800:0,113,255:40,0 chr1 202538275 . G . PASS END=202538325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:73:0,120,1800:0,206,255:40,0 chr1 202544130 . A . PASS END=202544133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:32,0 chr1 202544134 . T . PASS END=202544134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:32,0 chr1 202544135 . C . PASS END=202544136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr1 202544137 . A . PASS END=202544139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr1 202544140 . A . PASS END=202544264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1239:0,84,255:40,0 chr1 202549602 . G . PASS END=202549688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,111,1608:0,117,255:40,0 chr1 202565885 . C . PASS END=202565889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr1 202565890 . T . PASS END=202565890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 202565891 . G . PASS END=202565924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,623:0,41,255:18,0 chr1 202565925 . G . PASS END=202565954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,62,255:26,0 chr1 202565955 . C . PASS END=202565958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 202565959 . G . PASS END=202565994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 202565995 . C . PASS END=202565995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:25,0 chr1 202565996 . T . PASS END=202566003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 202566004 . T . PASS END=202566023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1078:0,84,255:31,0 chr1 202566024 . A . PASS END=202566024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 202566025 . T . PASS END=202566042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1180:0,93,255:32,0 chr1 202566043 . T . PASS END=202566043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,912:0,62,255:29,0 chr1 202566044 . C . PASS END=202566059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:32,0 chr1 202566060 . T . PASS END=202566072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:24,0 chr1 202566073 . T . PASS END=202566091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:17:0,48,720:0,51,255:19,0 chr1 202568346 . C . PASS END=202568479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,122,255:40,1 chr1 202569485 . C . PASS END=202569491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 202569492 . G . PASS END=202569492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 202569493 . C . PASS END=202569505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 202569506 . T . PASS END=202569506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 202569507 . C . PASS END=202569510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 202569511 . T . PASS END=202569511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 202569512 . T . PASS END=202569521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 202569522 . A . PASS END=202569522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 202569523 . G . PASS END=202569523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 202569524 . C . PASS END=202569525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 202569526 . T . PASS END=202569527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 202569528 . C . PASS END=202569528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 202569529 . A . PASS END=202569541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,856:0,72,255:24,0 chr1 202569542 . T . PASS END=202569542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 202569543 . G . PASS END=202569552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:22,0 chr1 202569553 . G . PASS END=202569553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 202569554 . C . PASS END=202569563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 202569564 . A . PASS END=202569578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,49,255:20,0 chr1 202569579 . G . PASS END=202569602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,482:0,39,255:13,0 chr1 202569605 . G . PASS END=202569605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 202571018 . C . PASS END=202571018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:30,0 chr1 202571019 . T . PASS END=202571019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:29,0 chr1 202571020 . C . PASS END=202571021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 202571022 . T . PASS END=202571022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1102:0,52,255:30,0 chr1 202571023 . C . PASS END=202571025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1182:0,99,255:33,0 chr1 202571026 . T . PASS END=202571026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1142:0,71,255:33,0 chr1 202571027 . T . PASS END=202571185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1150:0,85,255:40,0 chr1 202571506 . C . PASS END=202571512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,848:0,61,255:23,0 chr1 202571513 . G . PASS END=202571513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,876:0,34,255:22,0 chr1 202571514 . T . PASS END=202571523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr1 202571524 . A . PASS END=202571526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:23,0 chr1 202571527 . G . PASS END=202571534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr1 202571535 . G . PASS END=202571535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202571536 . G . PASS END=202571536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 202571537 . T . PASS END=202571537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202571538 . T . PASS END=202571538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 202571539 . C . PASS END=202571539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202571540 . A . PASS END=202571540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 202571541 . G . PASS END=202571547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:29,0 chr1 202571548 . C . PASS END=202571548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:27,0 chr1 202571549 . C . PASS END=202571553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 202571554 . G . PASS END=202571554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 202571555 . A . PASS END=202571560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 202571561 . G . PASS END=202571561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 202571562 . T . PASS END=202571562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,969:0,40,255:25,0 chr1 202571563 . C . PASS END=202571563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 202571564 . T . PASS END=202571569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 202571570 . T . PASS END=202571570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 202571571 . T . PASS END=202571579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 202571580 . T . PASS END=202571582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 202571583 . C . PASS END=202571587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202571588 . A . PASS END=202571606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,984:0,68,255:26,0 chr1 202571607 . A . PASS END=202571607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:22,0 chr1 202571608 . A . PASS END=202571635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr1 202571636 . G . PASS END=202571643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,754:0,52,255:19,0 chr1 202571644 . T . PASS END=202571644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 202571645 . T . PASS END=202571647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 202571648 . G . PASS END=202571648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202571649 . C . PASS END=202571673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,49,255:19,0 chr1 202572127 . C . PASS END=202572153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:97:47:0,97,1584:0,97,255:40,0 chr1 202572154 . G . PASS END=202572251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:95:48:0,95,1710:0,95,255:40,1 chr1 202572252 . G . PASS END=202572252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1652:0,67,255:38,0 chr1 202572253 . G . PASS END=202572255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:46:0,83,1576:0,83,255:39,0 chr1 202573583 . C . PASS END=202573592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,866:0,78,255:26,0 chr1 202573593 . T . PASS END=202573593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,795:0,47,255:25,0 chr1 202573594 . T . PASS END=202573594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 202573595 . C . PASS END=202573601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:30,0 chr1 202573602 . T . PASS END=202573602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 202573603 . T . PASS END=202573747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:31:0,83,1170:0,83,255:40,1 chr1 202573748 . T . PASS END=202573749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:75:40:0,75,1125:0,87,255:25,0 chr1 202574723 . A . PASS END=202574723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 202574724 . G . PASS END=202574726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 202574727 . A . PASS END=202574739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,666:0,46,255:19,0 chr1 202574740 . T . PASS END=202574740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202574741 . C . PASS END=202574742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 202574743 . T . PASS END=202574743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr1 202574744 . T . PASS END=202574746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 202574747 . A . PASS END=202574748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 202574749 . A . PASS END=202574749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 202574750 . A . PASS END=202574751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202574752 . T . PASS END=202574752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr1 202574753 . T . PASS END=202574753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202574754 . C . PASS END=202574754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 202574755 . T . PASS END=202574758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202574759 . T . PASS END=202574759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 202574760 . C . PASS END=202574761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 202574762 . G . PASS END=202574762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 202574763 . T . PASS END=202574763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 202574764 . T . PASS END=202574764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,658:0,43,255:19,0 chr1 202574765 . T . PASS END=202574765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 202574766 . G . PASS END=202574766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr1 202574767 . G . PASS END=202574770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 202574771 . A . PASS END=202574779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 202574780 . C . PASS END=202574780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:18,0 chr1 202574781 . C . PASS END=202574783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,50,255:18,0 chr1 202574784 . G A, 48.30 PASS DP=21;MQ=144.23;MQRankSum=-1.162;ReadPosRankSum=1.514;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,11,0:0.524,0.000:21:5,4,0:5,7,0:47:83,0,50,385,329,714:255,0,255:8,0:4.8300e+01,8.8272e-05,5.2554e+01,3.8539e+02,3.6364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,5,6:5,5,4,7 chr1 202574785 . C . PASS END=202574803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:18,0 chr1 202574804 . T . PASS END=202574804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:14,0 chr1 202574805 . C . PASS END=202574814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 202574815 . T . PASS END=202574820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 202574821 . A . PASS END=202574821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:11,0 chr1 202574822 . C . PASS END=202574826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 202574827 . C . PASS END=202574827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 202574828 . C . PASS END=202574828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 202574829 . A . PASS END=202574829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 202574830 . A . PASS END=202574835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 202574836 . A . PASS END=202574836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:13,0 chr1 202574837 . T . PASS END=202574847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:16,0 chr1 202574848 . G . PASS END=202574848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 202574849 . T . PASS END=202574849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:15,0 chr1 202574850 . G . PASS END=202574851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 202574852 . T . PASS END=202574852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 202574853 . G . PASS END=202574853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 202574854 . G . PASS END=202574854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:16,0 chr1 202574855 . C . PASS END=202574868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,607:0,40,255:19,0 chr1 202574869 . G . PASS END=202574883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 202574884 . T . PASS END=202574884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 202574885 . T . PASS END=202574890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 202574891 . T . PASS END=202574891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 202574892 . G . PASS END=202574899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,719:0,63,255:22,0 chr1 202574900 . T . PASS END=202574900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 202574901 . G . PASS END=202574909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr1 202574910 . G . PASS END=202574910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 202574911 . G . PASS END=202574937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:25,0 chr1 202574938 . G . PASS END=202574940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 202574941 . C . PASS END=202574941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 202574942 . A . PASS END=202574944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:32,0 chr1 202574945 . G . PASS END=202574945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 202574946 . T . PASS END=202575070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1139:0,80,255:40,0 chr1 202575071 . T . PASS END=202575071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:25,0 chr1 202695548 . C . PASS END=202695574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,194,255:40,0 chr1 202695575 . T . PASS END=202695631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:60:0,120,1800:0,136,255:40,0 chr1 202698164 . T . PASS END=202698301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:29:0,87,1072:0,87,255:40,0 chr1 202698582 . T . PASS END=202698602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:44:0,120,1800:0,122,255:40,0 chr1 202698778 . T . PASS END=202698838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,105,1528:0,110,255:40,0 chr1 202698839 . T . PASS END=202698839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1374:0,79,255:39,0 chr1 202698840 . C . PASS END=202699155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:33:0,83,1194:0,83,255:40,0 chr1 202700037 . C . PASS END=202700038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 202700039 . T . PASS END=202700039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 202700040 . C . PASS END=202700043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 202700044 . C . PASS END=202700044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 202700045 . T . PASS END=202700045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,935:0,51,255:26,0 chr1 202700046 . G . PASS END=202700051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 202700052 . T . PASS END=202700052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 202700053 . C . PASS END=202700057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 202700058 . T . PASS END=202700059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1025:0,73,255:26,0 chr1 202700060 . G . PASS END=202700064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 202700065 . C . PASS END=202700065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 202700066 . T . PASS END=202700160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1133:0,80,255:36,0 chr1 202700161 . A . PASS END=202700167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 202700168 . G . PASS END=202700168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr1 202700169 . T . PASS END=202700172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 202700173 . T . PASS END=202700173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 202700174 . T . PASS END=202700191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 202700956 . C . PASS END=202701067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,114,1800:0,114,255:40,0 chr1 202702529 . C . PASS END=202702530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,969:0,84,255:28,0 chr1 202702531 . T . PASS END=202702531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 202702532 . G . PASS END=202702544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,952:0,87,255:30,0 chr1 202702545 . A . PASS END=202702545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr1 202702546 . C . PASS END=202702547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 202702548 . T . PASS END=202702548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 202702549 . G . PASS END=202702566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1172:0,83,255:33,0 chr1 202702567 . A . PASS END=202702567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr1 202702568 . T . PASS END=202702608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:33:0,99,1219:0,99,255:40,0 chr1 202702609 . A . PASS END=202702609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1200:0,65,255:39,0 chr1 202702610 . T . PASS END=202702966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:35:0,87,1354:0,87,255:40,0 chr1 202702967 . C . PASS END=202702967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr1 202702968 . T . PASS END=202702984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:32,0 chr1 202702985 . C . PASS END=202702988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 202702989 . A . PASS END=202702996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 202702997 . T . PASS END=202703014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,922:0,62,255:25,0 chr1 202704557 . A . PASS END=202704557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 202704558 . G . PASS END=202704702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:31:0,83,1107:0,83,255:40,0 chr1 202704703 . G . PASS END=202704706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr1 202704707 . A . PASS END=202704710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 202704711 . A . PASS END=202704715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr1 202705341 . C . PASS END=202705417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1277:0,87,255:40,0 chr1 202705418 . C . PASS END=202705454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,108,1620:0,116,255:40,0 chr1 202705455 . G C, 48.26 PASS DP=44;MQ=250.00;MQRankSum=5.615;ReadPosRankSum=2.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,19,0:0.432,0.000:44:9,9,0:16,10,0:47:83,0,50,644,894,1545:255,0,255:20,0:4.8257e+01,8.6719e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,14,6,13:15,10,12,7 chr1 202705456 . G . PASS END=202705478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,98,255:36,0 chr1 202705479 . A . PASS END=202705491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,81,255:25,0 chr1 202705492 . G . PASS END=202705492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 202705493 . T . PASS END=202705496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 202705497 . T . PASS END=202705497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:18,0 chr1 202705498 . A . PASS END=202705516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,629:0,51,255:17,0 chr1 202705517 . C . PASS END=202705520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:11,0 chr1 202709802 . C . PASS END=202709802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 202709803 . T . PASS END=202709804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 202709805 . C . PASS END=202709807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,698:0,54,255:19,0 chr1 202709808 . G . PASS END=202709816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 202709817 . A . PASS END=202709823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 202709824 . A . PASS END=202709824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202709825 . G . PASS END=202709825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:20,0 chr1 202709826 . C . PASS END=202709828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 202709829 . G . PASS END=202709830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 202709831 . C . PASS END=202709831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 202709832 . T . PASS END=202709832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 202709833 . C . PASS END=202709833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 202709834 . T . PASS END=202709835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 202709836 . G . PASS END=202709837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 202709838 . T . PASS END=202709843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,853:0,80,255:27,0 chr1 202709844 . C . PASS END=202709854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1023:0,71,255:26,0 chr1 202709855 . T . PASS END=202709856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202709857 . A . PASS END=202709857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 202709858 . G . PASS END=202709866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 202709867 . C . PASS END=202709867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 202709868 . A . PASS END=202709868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 202709869 . T . PASS END=202709870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 202709871 . G . PASS END=202709871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr1 202709872 . G . PASS END=202709878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202709879 . A . PASS END=202709879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 202709880 . T . PASS END=202709883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 202709884 . G . PASS END=202709891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:25,0 chr1 202709892 . T . PASS END=202709892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:23,0 chr1 202709893 . T . PASS END=202709908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,885:0,62,255:25,0 chr1 202709909 . C . PASS END=202709938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,615:0,51,255:18,0 chr1 202709939 . G . PASS END=202709940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 202710495 . C . PASS END=202710497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 202710498 . G . PASS END=202710522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,825:0,66,255:26,0 chr1 202710523 . C . PASS END=202710607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,1016:0,80,255:36,0 chr1 202710608 . T . PASS END=202710612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 202710613 . C . PASS END=202710614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 202710615 . A . PASS END=202710615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 202710616 . T . PASS END=202710797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,956:0,81,255:40,0 chr1 202710798 . G . PASS END=202710814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:24:0,60,900:0,70,255:25,0 chr1 202710815 . A . PASS END=202710828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,775:0,50,255:19,0 chr1 202710829 . C . PASS END=202710831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202710832 . C . PASS END=202710839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,50,255:19,0 chr1 202710840 . T . PASS END=202710846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:20:0,36,540:0,47,255:12,0 chr1 202710847 . G . PASS END=202710847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:11,0 chr1 202710848 . A . PASS END=202710850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 202711519 . C . PASS END=202711633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:39:0,104,1422:0,104,255:40,0 chr1 202711783 . C . PASS END=202711910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:32:0,82,1053:0,82,255:40,0 chr1 202711911 . T . PASS END=202711911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr1 202711912 . A . PASS END=202711917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:34,0 chr1 202711918 . T . PASS END=202711918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1156:0,75,255:32,0 chr1 202711919 . T . PASS END=202711923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1318:0,92,255:33,0 chr1 202711924 . C . PASS END=202711924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:30,0 chr1 202711925 . T . PASS END=202711927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:31,0 chr1 202711928 . C . PASS END=202711933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,86,255:22,0 chr1 202714978 . T . PASS END=202715110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:48:0,117,1755:0,123,255:40,0 chr1 202715270 . C . PASS END=202715283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:51:0,101,1800:0,101,255:40,0 chr1 202715284 . G A, 49.66 PASS DP=58;MQ=250.00;MQRankSum=6.516;ReadPosRankSum=0.436;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,27,0:0.466,0.000:58:19,10,0:12,17,0:48:84,0,50,948,1043,1991:255,0,255:30,0:4.9665e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,10,17:12,19,7,20 chr1 202715285 . T . PASS END=202715321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:58:0,120,1800:0,174,255:40,0 chr1 202715322 . G . PASS END=202715451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:36:0,99,1485:0,108,255:40,0 chr1 202718073 . C . PASS END=202718164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,105,1800:0,105,255:40,0 chr1 202718165 . C . PASS END=202718201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,172,255:40,0 chr1 202718202 . G A, 50.00 PASS DP=65;MQ=250.00;MQRankSum=6.882;ReadPosRankSum=4.639;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,36,0:0.554,0.000:65:11,17,0:18,19,0:48:85,0,49,1251,1010,2261:255,0,255:28,0:5.0000e+01,7.0410e-05,5.2070e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,12,24:20,9,15,21 chr1 202718203 . T . PASS END=202718239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,139,255:40,0 chr1 202718240 . G . PASS END=202718264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,105,255:40,0 chr1 202718265 . C . PASS END=202718265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1154:0,72,255:28,0 chr1 202718266 . A . PASS END=202718267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:28,0 chr1 202719787 . C . PASS END=202719903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:31:0,81,1215:0,93,255:40,0 chr1 202719904 . A . PASS END=202719906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,76,255:25,0 chr1 202722033 . A . PASS END=202722033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 202722034 . G . PASS END=202722035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 202722036 . C . PASS END=202722037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 202722038 . C . PASS END=202722167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1058:0,87,255:40,0 chr1 202722168 . G . PASS END=202722192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,68,255:26,0 chr1 202722193 . C . PASS END=202722195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,53,255:18,0 chr1 202724399 . C . PASS END=202724420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1119:0,93,255:39,0 chr1 202724421 . A . PASS END=202724421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:37,0 chr1 202724422 . G . PASS END=202724580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:33:0,84,1260:0,98,255:40,0 chr1 202725486 . C . PASS END=202725627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:32:0,84,1150:0,86,255:40,0 chr1 202725628 . A . PASS END=202725629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:26,0 chr1 202725630 . C . PASS END=202725630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 202725631 . T . PASS END=202725632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:20,0 chr1 202725633 . T . PASS END=202725638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:54:30:0,54,810:0,90,255:19,0 chr1 202725639 . G . PASS END=202725642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:20,0 chr1 202725643 . A . PASS END=202725643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 202725644 . T . PASS END=202725644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 202727519 . A . PASS END=202727638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:83:37:0,83,1337:0,83,255:40,0 chr1 202729543 . C . PASS END=202729545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:26,0 chr1 202729546 . A . PASS END=202729693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:28:0,81,1055:0,84,255:40,0 chr1 202729694 . A . PASS END=202729701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:34:0,69,1035:0,102,255:26,0 chr1 202731827 . A . PASS END=202731936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,120,1613:0,120,255:40,0 chr1 202733177 . C . PASS END=202733200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,117,1574:0,119,255:40,0 chr1 202733201 . A . PASS END=202733237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,153,255:40,0 chr1 202733238 . C T, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.532;ReadPosRankSum=2.488;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,29,0:0.500,0.000:58:17,12,0:12,17,0:47:85,0,47,185,185,185:255,0,255:28,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,17,13,16:12,17,16,13 chr1 202733239 . G . PASS END=202733273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,111,1665:0,124,255:40,0 chr1 202736054 . C . PASS END=202736055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 202736056 . C . PASS END=202736056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 202736057 . T . PASS END=202736057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 202736058 . G . PASS END=202736064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr1 202736065 . T . PASS END=202736065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,711:0,47,255:19,0 chr1 202736066 . G . PASS END=202736123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,762:0,63,255:25,0 chr1 202736124 . G . PASS END=202736124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 202736125 . G . PASS END=202736127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 202736128 . T . PASS END=202736128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr1 202736129 . A . PASS END=202736141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 202736142 . T . PASS END=202736155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 202736156 . A . PASS END=202736156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 202736157 . G . PASS END=202736160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 202736161 . C . PASS END=202736161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 202736162 . T . PASS END=202736167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:17,0 chr1 202736168 . C . PASS END=202736169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,37,255:12,0 chr1 202736170 . G . PASS END=202736173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 202736174 . T . PASS END=202736177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 202736178 . T . PASS END=202736180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 202736181 . T . PASS END=202736181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 202736182 . G . PASS END=202736188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 202742096 . A . PASS END=202742096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 202742097 . T . PASS END=202742416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:39:0,105,1435:0,113,255:40,1 chr1 202743741 . C . PASS END=202743863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:40:0,103,1267:0,103,255:40,0 chr1 202746145 . C . PASS END=202746219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:35:0,88,1234:0,88,255:40,0 chr1 202746220 . A . PASS END=202746220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:30,0 chr1 202746221 . T . PASS END=202746222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:31,0 chr1 202777230 . C . PASS END=202777235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 202777236 . C . PASS END=202777243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr1 202777244 . C . PASS END=202777244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 202777245 . C . PASS END=202777246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 202777247 . T . PASS END=202777247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 202777248 . A . PASS END=202777248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 202777249 . C . PASS END=202777249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 202777250 . A . PASS END=202777251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 202777252 . A . PASS END=202777253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr1 202777254 . G . PASS END=202777254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 202777255 . C . PASS END=202777260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 202777261 . T . PASS END=202777265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 202777266 . G . PASS END=202777266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 202777267 . G . PASS END=202777274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:24,0 chr1 202777275 . C . PASS END=202777275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 202777276 . C . PASS END=202777276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 202777277 . G . PASS END=202777279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,828:0,42,255:23,0 chr1 202777280 . T . PASS END=202777282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 202777283 . T . PASS END=202777283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 202777284 . G . PASS END=202777288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 202777289 . T . PASS END=202777289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 202777290 . G . PASS END=202777303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,921:0,62,255:26,0 chr1 202777304 . C . PASS END=202777304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202777305 . C . PASS END=202777305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 202777306 . G . PASS END=202777307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202777308 . G . PASS END=202777308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 202777309 . A . PASS END=202777309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 202777310 . A . PASS END=202777310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,910:0,70,255:27,0 chr1 202777311 . C . PASS END=202777311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 202777312 . T . PASS END=202777312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 202777313 . C . PASS END=202777321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 202777322 . T . PASS END=202777322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 202777323 . G . PASS END=202777323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 202777324 . G . PASS END=202777324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 202777325 . G . PASS END=202777325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 202777326 . T . PASS END=202777326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,947:0,57,255:27,0 chr1 202777327 . T . PASS END=202777329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 202777330 . A . PASS END=202777330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 202777331 . A . PASS END=202777331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:29,0 chr1 202777332 . G . PASS END=202777335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1056:0,90,255:30,0 chr1 202777336 . G . PASS END=202777336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 202777337 . G . PASS END=202777337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 202777338 . G . PASS END=202777338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 202777339 . C . PASS END=202777341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 202777342 . T . PASS END=202777342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 202777343 . C . PASS END=202777344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 202777345 . G . PASS END=202777345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 202777346 . G . PASS END=202777348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 202777349 . G . PASS END=202777349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 202777350 . A . PASS END=202777350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 202777351 . G . PASS END=202777352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 202777353 . C . PASS END=202777361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 202777362 . G . PASS END=202777362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 202777363 . C . PASS END=202777365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 202777366 . A . PASS END=202777369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1070:0,77,255:26,0 chr1 202777370 . G . PASS END=202777370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:25,0 chr1 202777371 . G . PASS END=202777373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 202777374 . C . PASS END=202777377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1010:0,48,255:25,0 chr1 202777378 . C . PASS END=202777384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:24,0 chr1 202777385 . G . PASS END=202777386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:24,0 chr1 202777387 . G . PASS END=202777387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 202777388 . G . PASS END=202777388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:24,0 chr1 202777389 . C . PASS END=202777405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,62,255:24,0 chr1 202777406 . C . PASS END=202777414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:20:0,42,630:0,47,255:19,0 chr1 202777415 . G . PASS END=202777430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 202777431 . C . PASS END=202777433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 202850106 . T . PASS END=202850297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:36:0,92,1396:0,92,255:40,0 chr1 202850298 . A . PASS END=202850298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1209:0,53,255:32,0 chr1 202850299 . G . PASS END=202850307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1318:0,92,255:34,0 chr1 202850308 . C . PASS END=202850308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:31,0 chr1 202850309 . C . PASS END=202850327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:29:0,81,1215:0,85,255:32,0 chr1 202850328 . C . PASS END=202850351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr1 202858101 . C . PASS END=202858113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:24,0 chr1 202858114 . A . PASS END=202858114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:23,0 chr1 202858115 . A . PASS END=202858116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 202858117 . A . PASS END=202858117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 202858118 . G . PASS END=202858120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 202858121 . C . PASS END=202858121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 202858122 . G . PASS END=202858122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 202858123 . G . PASS END=202858129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 202858130 . G . PASS END=202858130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 202858131 . C . PASS END=202858141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1255:0,96,255:33,0 chr1 202858142 . G . PASS END=202858142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:31,0 chr1 202858143 . G . PASS END=202858167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:33,0 chr1 202858168 . G . PASS END=202858169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:29,0 chr1 202858170 . C . PASS END=202858188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 202858189 . G . PASS END=202858226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:26,0 chr1 202861661 . T . PASS END=202861663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr1 202861664 . C . PASS END=202861664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 202861665 . T . PASS END=202861665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr1 202861666 . T . PASS END=202861692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1066:0,89,255:37,0 chr1 202861693 . C . PASS END=202861693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 202861694 . A . PASS END=202861783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr1 202861784 . A . PASS END=202861784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 202861785 . T . PASS END=202861787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 202862367 . C . PASS END=202862372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,825:0,66,255:26,0 chr1 202862373 . A . PASS END=202862379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:30,0 chr1 202862380 . A . PASS END=202862380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 202862381 . G . PASS END=202862383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 202862384 . T . PASS END=202862384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 202862385 . C . PASS END=202862553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:32:0,81,1202:0,96,255:40,0 chr1 202863312 . C . PASS END=202863410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:98:41:0,98,1485:0,98,255:40,0 chr1 202863719 . C . PASS END=202863720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 202863721 . A . PASS END=202863721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202863722 . G . PASS END=202863723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 202863724 . C . PASS END=202863755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1147:0,80,255:35,0 chr1 202863756 . G . PASS END=202863756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr1 202863757 . G . PASS END=202863825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,94,255:37,0 chr1 202863826 . A . PASS END=202863854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,845:0,69,255:26,0 chr1 202863855 . G . PASS END=202863857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 202863858 . T . PASS END=202863861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 202863862 . G . PASS END=202863864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,56,255:17,0 chr1 202863865 . A . PASS END=202863865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:14,0 chr1 202863866 . C . PASS END=202863867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 202863868 . T . PASS END=202863877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:18:0,30,450:0,47,255:10,0 chr1 202864650 . C . PASS END=202864654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 202864655 . A . PASS END=202864655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr1 202864656 . G . PASS END=202864663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:24,0 chr1 202864664 . G . PASS END=202864664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:24,0 chr1 202864665 . C . PASS END=202864676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,842:0,62,255:26,0 chr1 202864677 . C . PASS END=202864696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,966:0,81,255:28,0 chr1 202864697 . G . PASS END=202864700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 202864701 . C . PASS END=202864720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,96,255:37,0 chr1 202864721 . T . PASS END=202864721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:31,0 chr1 202864722 . C . PASS END=202864732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:36:0,93,1274:0,94,255:35,0 chr1 202864733 . T . PASS END=202864733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:33,0 chr1 202864734 . A . PASS END=202864822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,87,255:40,0 chr1 202864823 . T . PASS END=202864823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:27,0 chr1 202864824 . A . PASS END=202864827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,86,255:28,0 chr1 202864828 . T . PASS END=202864828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr1 202864829 . C . PASS END=202864835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202864836 . G . PASS END=202864845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:24,0 chr1 202865982 . T . PASS END=202865993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr1 202865994 . C . PASS END=202866088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,986:0,80,255:37,0 chr1 202878138 . C . PASS END=202878252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1166:0,86,255:40,0 chr1 202880182 . C . PASS END=202880183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 202880184 . C . PASS END=202880184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 202880185 . A . PASS END=202880192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:26,0 chr1 202880193 . T . PASS END=202880331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,980:0,81,255:40,0 chr1 202887299 . C . PASS END=202887332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,102,1589:0,102,255:40,0 chr1 202887333 . T . PASS END=202887516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,120,1800:0,147,255:40,0 chr1 202888883 . C . PASS END=202888885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 202888886 . T . PASS END=202888886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 202888887 . C . PASS END=202888905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,925:0,62,255:26,0 chr1 202888906 . G . PASS END=202888908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202888909 . G . PASS END=202888909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 202888910 . G . PASS END=202888915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 202888916 . G . PASS END=202888918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 202888919 . C . PASS END=202888920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 202888921 . T . PASS END=202888921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 202888922 . G . PASS END=202889024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1119:0,87,255:39,0 chr1 202889025 . C . PASS END=202889036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 202894096 . C . PASS END=202894335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:38:0,100,1427:0,100,255:40,0 chr1 202896593 . C . PASS END=202896594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1081:0,82,255:31,0 chr1 202896595 . G . PASS END=202896595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:29,0 chr1 202896596 . A . PASS END=202896597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 202896598 . C . PASS END=202896598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1100:0,38,255:30,0 chr1 202896599 . T . PASS END=202896602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1202:0,86,255:31,0 chr1 202896603 . G . PASS END=202896603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:24,0 chr1 202896604 . A . PASS END=202896604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1066:0,36,255:22,0 chr1 202896605 . G . PASS END=202896611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:72:42:0,72,1080:0,93,255:25,0 chr1 202896612 . A . PASS END=202896612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1195:0,59,255:23,0 chr1 202896613 . C . PASS END=202896614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:40:0,69,1035:0,81,255:23,0 chr1 202896615 . C . PASS END=202896615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1195:0,45,255:22,0 chr1 202896616 . G . PASS END=202896617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1080:0,61,255:23,0 chr1 202896618 . C . PASS END=202896618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:38:39:0,38,1107:0,38,255:20,0 chr1 202896619 . T . PASS END=202896620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:66:39:0,66,990:0,67,255:21,0 chr1 202896621 . G . PASS END=202896622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:57:39:0,57,855:0,101,255:19,0 chr1 202896623 . G . PASS END=202896623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:60:39:0,60,900:0,100,255:19,0 chr1 202896624 . A . PASS END=202896624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:6:39:0,6,1103:0,6,255:19,0 chr1 202896625 . T . PASS END=202896625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1142:0,42,255:15,0 chr1 202896626 . C . PASS END=202896626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1099:0,28,255:14,0 chr1 202896627 . A . PASS END=202896629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:42:37:0,42,630:0,42,255:15,0 chr1 202896630 . G . PASS END=202896631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:22:37:0,22,1011:0,22,255:12,0 chr1 202896632 . A . PASS END=202896632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:36:37:0,36,540:0,78,255:11,0 chr1 202896633 . A . PASS END=202896635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:21:37:0,21,315:0,28,255:8,0 chr1 202896636 . C . PASS END=202896637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:12:35:0,12,180:0,36,255:4,0 chr1 202896638 . C . PASS END=202896643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:9:34:0,9,135:0,24,255:1,0 chr1 202897609 . C . PASS END=202897677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:37:0,90,1311:0,90,255:40,0 chr1 202910701 . T . PASS END=202910702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 202910703 . A . PASS END=202910703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 202910704 . G . PASS END=202910724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,959:0,65,255:26,0 chr1 202910725 . G . PASS END=202910776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1055:0,83,255:32,0 chr1 202910777 . T . PASS END=202910780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 202910781 . C . PASS END=202910781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,2 chr1 202910782 . A . PASS END=202910782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,986:0,21,255:26,2 chr1 202910783 . A . PASS END=202910783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 202910784 . A . PASS END=202910804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 202910805 . C . PASS END=202910805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:20,0 chr1 202910806 . A . PASS END=202910811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 202910812 . A . PASS END=202910812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 202910813 . A . PASS END=202910816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 202910817 . G . PASS END=202910817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 202910818 . A . PASS END=202910819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 202910820 . G . PASS END=202910829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:17,0 chr1 202911153 . C . PASS END=202911168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:22,0 chr1 202911169 . C . PASS END=202911169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 202911170 . C . PASS END=202911180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:23,0 chr1 202911181 . C . PASS END=202911181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr1 202911182 . G . PASS END=202911198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,856:0,72,255:25,0 chr1 202911199 . G . PASS END=202911228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1194:0,83,255:35,0 chr1 202911229 . A . PASS END=202911229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:34,0 chr1 202911230 . C . PASS END=202911230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 202911231 . A . PASS END=202911231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,0 chr1 202911232 . G . PASS END=202911234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,108,1620:0,111,255:36,0 chr1 202911235 . A . PASS END=202911236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:35,0 chr1 202911237 . G . PASS END=202911244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:34,0 chr1 202911245 . A . PASS END=202911245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:32,0 chr1 202911246 . C . PASS END=202911247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1310:0,92,255:33,0 chr1 202911248 . A . PASS END=202911248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr1 202911249 . G . PASS END=202911265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:35,0 chr1 202911266 . T . PASS END=202911266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1202:0,61,255:31,0 chr1 202911267 . G . PASS END=202911273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1234:0,91,255:34,0 chr1 202911274 . T . PASS END=202911274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1119:0,63,255:33,0 chr1 202911275 . T . PASS END=202911278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1227:0,102,255:34,0 chr1 202911279 . A . PASS END=202911279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:31,0 chr1 202911280 . A . PASS END=202911285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1196:0,85,255:32,0 chr1 202911286 . T . PASS END=202911286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr1 202911287 . C . PASS END=202911292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1151:0,86,255:32,0 chr1 202911293 . T . PASS END=202911293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:31,0 chr1 202911294 . A . PASS END=202911303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1081:0,82,255:32,0 chr1 202911304 . A . PASS END=202911305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1151:0,63,255:29,0 chr1 202911306 . G . PASS END=202911309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1188:0,85,255:29,0 chr1 202911310 . G . PASS END=202911310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 202911311 . G . PASS END=202911312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 202911313 . A . PASS END=202911324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,74,255:24,0 chr1 202911325 . A . PASS END=202911325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 202911326 . A . PASS END=202911330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr1 202911331 . A . PASS END=202911331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 202911332 . G . PASS END=202911332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 202911333 . T . PASS END=202911333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 202911334 . C . PASS END=202911337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 202911338 . G . PASS END=202911345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:24:0,45,675:0,56,255:16,0 chr1 202911346 . C . PASS END=202911346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:24:0,39,585:0,72,255:13,0 chr1 202912878 . C . PASS END=202912878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 202912886 . C . PASS END=202912904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:30,0 chr1 202912905 . C . PASS END=202912905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 202912906 . T . PASS END=202912910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:30,0 chr1 202912911 . A . PASS END=202912911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr1 202912912 . G . PASS END=202912947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:31:0,89,994:0,89,255:35,0 chr1 202912948 . G . PASS END=202912948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1188:0,53,255:32,0 chr1 202912949 . A . PASS END=202912968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1268:0,80,255:35,0 chr1 202912969 . A . PASS END=202912969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:31,0 chr1 202912970 . T . PASS END=202912972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:33,0 chr1 202912973 . A . PASS END=202912973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 202912974 . G . PASS END=202912974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:31,0 chr1 202912975 . A . PASS END=202912975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1094:0,55,255:30,0 chr1 202912976 . G . PASS END=202912976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:30,0 chr1 202912977 . G . PASS END=202912979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:35:0,94,1242:0,94,255:33,0 chr1 202912980 . G . PASS END=202912980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:32,0 chr1 202912981 . A . PASS END=202912985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1199:0,91,255:32,0 chr1 202912986 . C . PASS END=202912986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr1 202912987 . C . PASS END=202912995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1188:0,85,255:31,1 chr1 202912996 . G . PASS END=202912996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:57:36:0,57,1192:0,57,255:29,1 chr1 202912997 . G . PASS END=202913007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr1 202913008 . A . PASS END=202913008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:29,0 chr1 202913009 . A . PASS END=202913020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr1 202913021 . G . PASS END=202913021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr1 202913022 . C . PASS END=202913027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 202913028 . G . PASS END=202913028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 202913029 . A . PASS END=202913032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1084:0,87,255:29,0 chr1 202913033 . A . PASS END=202913033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:28,0 chr1 202913034 . G . PASS END=202913034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 202913035 . C . PASS END=202913035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 202913036 . T . PASS END=202913040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 202913041 . A . PASS END=202913053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,931:0,67,255:25,0 chr1 202913054 . C . PASS END=202913063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:25:0,42,630:0,75,255:18,0 chr1 202913064 . A . PASS END=202913073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:14:0,36,540:0,42,255:12,0 chr1 202914111 . T . PASS END=202914116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 202914117 . A . PASS END=202914117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 202914118 . A . PASS END=202914118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 202914119 . A . PASS END=202914119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr1 202914120 . G . PASS END=202914128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:30,0 chr1 202914129 . A . PASS END=202914129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr1 202914130 . C . PASS END=202914297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:30:0,87,1036:0,90,255:40,0 chr1 202915567 . C . PASS END=202915574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,695:0,63,255:22,0 chr1 202915575 . T . PASS END=202915575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,738:0,38,255:21,0 chr1 202915576 . G . PASS END=202915582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr1 202915583 . G . PASS END=202915589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:30,0 chr1 202915590 . C . PASS END=202915590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 202915591 . C . PASS END=202915706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1081:0,80,255:38,0 chr1 202915707 . T . PASS END=202915716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,984:0,65,255:26,0 chr1 202915717 . C . PASS END=202915717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 202915718 . C . PASS END=202915719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr1 202915720 . T . PASS END=202915727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 202915728 . C . PASS END=202915730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202915731 . T . PASS END=202915738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 202917432 . C . PASS END=202917442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:39:0,93,1473:0,93,255:40,0 chr1 202917443 . A . PASS END=202917443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:55:41:0,55,950:0,55,255:37,0 chr1 202917444 . C . PASS END=202917544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:35:0,81,1227:0,81,255:40,0 chr1 202917545 . C . PASS END=202917548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:24,0 chr1 202920058 . T . PASS END=202920066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,74,255:26,0 chr1 202920067 . G . PASS END=202920198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1076:0,87,255:40,0 chr1 202931655 . T . PASS END=202931827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:32:0,87,1305:0,93,255:40,0 chr1 202932054 . T . PASS END=202932293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:32:0,86,1143:0,86,255:40,0 chr1 202932770 . C . PASS END=202932855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:68:0,120,1800:0,191,255:40,0 chr1 202933740 . C . PASS END=202933823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,102,1530:0,105,255:40,0 chr1 202934499 . C . PASS END=202934513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 202934514 . T . PASS END=202934514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 202934515 . G . PASS END=202934529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,886:0,61,255:26,0 chr1 202934530 . C . PASS END=202934547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 202934548 . A . PASS END=202934548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 202934549 . T . PASS END=202934552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202934553 . C . PASS END=202934571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr1 202934572 . G . PASS END=202934572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr1 202934573 . T . PASS END=202934580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,833:0,61,255:23,0 chr1 202934581 . C . PASS END=202934581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,711:0,55,255:21,0 chr1 202934582 . A . PASS END=202934582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,690:0,22,255:20,0 chr1 202934583 . T . PASS END=202934583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 202934584 . C . PASS END=202934584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 202934585 . T . PASS END=202934605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,853:0,69,255:23,0 chr1 202934606 . G . PASS END=202934616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 202934617 . C . PASS END=202934618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202934619 . T . PASS END=202934623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 202934624 . T . PASS END=202934628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,44,255:12,0 chr1 202935015 . C . PASS END=202935121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:41:0,97,1203:0,97,255:40,0 chr1 202935656 . C . PASS END=202935728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:33:0,81,1215:0,86,255:38,0 chr1 202935877 . C . PASS END=202935889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr1 202935890 . A . PASS END=202935898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 202935899 . A . PASS END=202935899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 202935900 . G . PASS END=202935901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 202935902 . T . PASS END=202935902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:27,0 chr1 202935903 . A . PASS END=202935904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 202935905 . T . PASS END=202935905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr1 202935906 . T . PASS END=202935913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,942:0,84,255:29,0 chr1 202935914 . G . PASS END=202935923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 202935924 . G . PASS END=202935943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr1 202935944 . G . PASS END=202935957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 202935958 . G . PASS END=202935958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:24,0 chr1 202935959 . T . PASS END=202935977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,929:0,62,255:25,0 chr1 202935978 . C . PASS END=202935978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 202935979 . G . PASS END=202935983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 202935984 . G . PASS END=202935994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 202935995 . C . PASS END=202935996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 202935997 . C . PASS END=202936008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,53,255:19,0 chr1 202936009 . G . PASS END=202936023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:11:0,33,396:0,33,255:13,0 chr1 202936024 . G . PASS END=202936026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 202936319 . C . PASS END=202936333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,801:0,69,255:24,0 chr1 202976594 . A . PASS END=202976594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,672:0,63,255:21,0 chr1 202976595 . T . PASS END=202976595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 202976596 . G . PASS END=202976611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,764:0,63,255:23,0 chr1 202976612 . C . PASS END=202976614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:29,0 chr1 202976615 . C . PASS END=202976615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 202976616 . T . PASS END=202976620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1044:0,90,255:32,0 chr1 202976621 . A . PASS END=202976621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1033:0,63,255:30,0 chr1 202976622 . G . PASS END=202976635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1127:0,80,255:39,0 chr1 202976636 . A . PASS END=202976636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1303:0,65,255:35,0 chr1 202976637 . C . PASS END=202976645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1322:0,100,255:39,0 chr1 202976646 . T . PASS END=202976646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1291:0,73,255:34,0 chr1 202976647 . G . PASS END=202976657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:42:0,88,1347:0,88,255:40,0 chr1 202976658 . G . PASS END=202976658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1214:0,76,255:39,0 chr1 202976659 . A . PASS END=202976702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1360:0,93,255:40,0 chr1 202976902 . T . PASS END=202976963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1245:0,81,255:40,0 chr1 202976964 . G . PASS END=202976964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:31,0 chr1 202976965 . C . PASS END=202976966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:32,0 chr1 202976967 . G . PASS END=202976968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:30,0 chr1 202976969 . A . PASS END=202976969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1350:0,92,255:30,0 chr1 202976970 . G . PASS END=202976970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:30,0 chr1 202976971 . C . PASS END=202976977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:29,0 chr1 202976978 . T . PASS END=202976978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:28,0 chr1 202976979 . G . PASS END=202976981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:28,0 chr1 202976982 . C . PASS END=202976982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 202976983 . A . PASS END=202976983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:28,0 chr1 202976984 . G . PASS END=202976984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 202976985 . C . PASS END=202976985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 202976986 . A . PASS END=202976991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1049:0,73,255:29,0 chr1 202977771 . T . PASS END=202977777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,817:0,72,255:24,0 chr1 202977778 . T . PASS END=202977778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 202977779 . C . PASS END=202977787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 202977788 . T . PASS END=202977788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 202977789 . T . PASS END=202977794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 202977795 . C . PASS END=202977796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 202977797 . T . PASS END=202977797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 202977798 . C . PASS END=202977830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1080:0,90,255:35,0 chr1 202977831 . C . PASS END=202977831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:35,0 chr1 202977832 . T . PASS END=202977891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,91,255:37,0 chr1 202977892 . C . PASS END=202977921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,774:0,63,255:23,0 chr1 202977922 . A . PASS END=202977924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 202977925 . C . PASS END=202977928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 202977929 . A . PASS END=202977936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:18,0 chr1 202977937 . A . PASS END=202977937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 202977938 . G . PASS END=202977938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 202984017 . A . PASS END=202984176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,120,1800:0,137,255:40,0 chr1 202985088 . G . PASS END=202985268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:37:0,96,1512:0,96,255:40,0 chr1 202987609 . T . PASS END=202987689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,167,255:40,0 chr1 202989921 . T . PASS END=202989953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1177:0,83,255:36,0 chr1 202989954 . T . PASS END=202989954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr1 202989955 . T . PASS END=202990027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:40,0 chr1 202990028 . C . PASS END=202990028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 202990029 . C . PASS END=202990034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 202990035 . T . PASS END=202990035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr1 202990036 . T . PASS END=202990038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 202990039 . T . PASS END=202990039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:25,0 chr1 202990040 . C . PASS END=202990040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 202990041 . T . PASS END=202990041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:26,0 chr1 202990042 . T . PASS END=202990042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202990043 . T . PASS END=202990043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,779:0,50,255:25,0 chr1 202990044 . A . PASS END=202990044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 202990045 . T . PASS END=202990045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:25,0 chr1 202990046 . T . PASS END=202990049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 202990050 . A . PASS END=202990050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:25,0 chr1 202990051 . T . PASS END=202990051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,853:0,26,255:24,0 chr1 202990052 . T . PASS END=202990052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:19:27:0,19,752:0,19,255:24,0 chr1 202990053 . G . PASS END=202990054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:25,0 chr1 202990055 . C . PASS END=202990055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 202990056 . A . PASS END=202990056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,929:0,65,255:25,0 chr1 202990057 . T . PASS END=202990057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:18:28:0,18,751:0,18,255:22,0 chr1 202990058 . G . PASS END=202990058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,884:0,29,255:25,0 chr1 202990059 . G . PASS END=202990059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,931:0,45,255:26,0 chr1 202990060 . G . PASS END=202990061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:26,0 chr1 202990062 . A . PASS END=202990062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:26,0 chr1 202990063 . T . PASS END=202990063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,922:0,7,255:25,0 chr1 202990064 . G . PASS END=202990064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,809:0,23,255:24,0 chr1 202990065 . A . PASS END=202990065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:24,0 chr1 202990066 . T . LowGQ END=202990066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,648:24,0,255:22,0 chr1 202990067 . A . PASS END=202990067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,842:0,31,255:22,0 chr1 202990068 . T . PASS END=202990068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:17:29:0,17,878:0,17,255:22,0 chr1 202990069 . T . PASS END=202990069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr1 202990070 . T . PASS END=202990070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:22,0 chr1 202990071 . A . PASS END=202990071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,864:0,29,255:22,0 chr1 202990072 . C . PASS END=202990072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,878:0,37,255:21,0 chr1 202990073 . T . PASS END=202990073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,67,255:19,0 chr1 202990074 . C . LowGQ END=202990076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,706:13,0,255:17,0 chr1 202991983 . T . PASS END=202992075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1255:0,87,255:40,0 chr1 202992076 . G . PASS END=202992108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 202992109 . C . PASS END=202992113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:19,0 chr1 202992114 . C . PASS END=202992114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:16,0 chr1 202992115 . G . PASS END=202992129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 202992130 . T . PASS END=202992144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,535:0,31,255:13,0 chr1 202992145 . T . PASS END=202992145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 202992146 . A . PASS END=202992146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 202992147 . C . PASS END=202992147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 202992148 . C . PASS END=202992149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 202992150 . A . PASS END=202992151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 202992152 . T . PASS END=202992160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 202992161 . G . PASS END=202992166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:11:0,20,360:0,20,255:9,0 chr1 202992167 . A . PASS END=202992167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 202992168 . G . PASS END=202992168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 203008137 . A . PASS END=203008151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr1 203008152 . C . PASS END=203008152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 203008153 . C . PASS END=203008153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 203008154 . C . PASS END=203008154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 203008155 . A . PASS END=203008162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 203008163 . T . PASS END=203008163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 203008164 . G . PASS END=203008173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 203008174 . G C, 101.17 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,7,0:0,11,0:51:139,54,0,685,54,685:255,54,0:0,0:1.0117e+02,5.1171e+01,3.3134e-05,4.5000e+02,8.5941e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,6:0,0,7,11 chr1 203008175 . C . PASS END=203008176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 203008177 . T . PASS END=203008177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 203008178 . G . PASS END=203008183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,713:0,57,255:19,0 chr1 203008184 . C . PASS END=203008186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 203008187 . T . PASS END=203008187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 203008188 . C . PASS END=203008188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 203008189 . A . PASS END=203008189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 203008190 . T . PASS END=203008204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 203008205 . C . PASS END=203008208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203008209 . A . PASS END=203008209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 203008210 . A . PASS END=203008211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203008212 . T . PASS END=203008215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 203008216 . A . PASS END=203008222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 203008223 . G . PASS END=203008240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1011:0,87,255:29,0 chr1 203008241 . C . PASS END=203008248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 203008249 . A . PASS END=203008253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:27:0,69,1035:0,70,255:25,0 chr1 203008254 . T . PASS END=203008254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,851:0,23,255:22,0 chr1 203008255 . T . PASS END=203008263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,893:0,62,255:23,0 chr1 203008264 . C . PASS END=203008265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 203008266 . C . PASS END=203008266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 203008267 . T . PASS END=203008278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 203008279 . A . PASS END=203008279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 203008280 . G . PASS END=203008284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 203008285 . C . PASS END=203008285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 203008286 . C G, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.375;ReadPosRankSum=0.988;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,17,0:0.607,0.000:28:7,6,0:4,11,0:47:85,0,47,600,393,993:255,0,255:11,0:5.0000e+01,8.4907e-05,5.0190e+01,4.5000e+02,4.2793e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,6,11:4,7,9,8 chr1 203008287 . T . PASS END=203008291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1001:0,84,255:28,0 chr1 203008292 . G . PASS END=203008323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 203008324 . A . PASS END=203008342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:25,0 chr1 203008343 . G . PASS END=203008343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 203008344 . C . PASS END=203008345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 203008346 . C . PASS END=203008349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 203008350 . C . PASS END=203008355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 203008356 . T . PASS END=203008360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 203008361 . C . PASS END=203008361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 203008362 . C . PASS END=203008370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr1 203012525 . G . PASS END=203012603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1161:0,80,255:40,0 chr1 203012604 . A . PASS END=203012604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:32,0 chr1 203012605 . A . PASS END=203012609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,95,255:33,0 chr1 203012610 . A . PASS END=203012614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr1 203012615 . A . PASS END=203012616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr1 203012617 . T . PASS END=203012617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:26,0 chr1 203012618 . A . PASS END=203012623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:29,0 chr1 203012624 . C . PASS END=203012624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr1 203012625 . G . PASS END=203012626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 203013059 . C . PASS END=203013059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 203013060 . T . PASS END=203013060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 203013061 . G . PASS END=203013061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr1 203013062 . C . PASS END=203013064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 203013065 . C . PASS END=203013065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 203013066 . T . PASS END=203013072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203013073 . T . PASS END=203013073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 203013074 . C . PASS END=203013076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203013077 . G . PASS END=203013077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 203013078 . A . PASS END=203013080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 203013081 . G . PASS END=203013081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 203013082 . C . PASS END=203013083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 203013084 . T . PASS END=203013085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 203013086 . G . PASS END=203013089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 203013090 . C . PASS END=203013091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 203013092 . C . PASS END=203013099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 203013100 . A . PASS END=203013100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 203013101 . C . PASS END=203013103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 203013104 . T . PASS END=203013115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:27,0 chr1 203013116 . A . PASS END=203013117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 203013118 . T . PASS END=203013118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 203013119 . G . PASS END=203013137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 203013138 . A . PASS END=203013140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 203013141 . C . PASS END=203013141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 203013142 . A . PASS END=203013142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 203013143 . C . PASS END=203013145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1149:0,82,255:28,0 chr1 203013146 . T . PASS END=203013146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1064:0,65,255:27,0 chr1 203013147 . C . PASS END=203013157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:30,0 chr1 203013158 . A . PASS END=203013158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 203013159 . G . PASS END=203013163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 203013164 . G . PASS END=203013192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:26,0 chr1 203013193 . G . PASS END=203013193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 203013194 . T . PASS END=203013197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:24,0 chr1 203013198 . A . PASS END=203013198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:20,0 chr1 203013199 . G . PASS END=203013213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:24,0 chr1 203013214 . G . PASS END=203013214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:20,0 chr1 203013215 . G . PASS END=203013223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 203013507 . G . PASS END=203013508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 203013509 . G . PASS END=203013510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 203013511 . G . PASS END=203013517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,454:0,45,255:15,0 chr1 203013518 . G . PASS END=203013518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 203013519 . C . PASS END=203013524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr1 203013525 . G . PASS END=203013531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:17,0 chr1 203013532 . T . PASS END=203013540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr1 203013541 . T . PASS END=203013581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,529:0,45,255:19,0 chr1 203013824 . G . PASS END=203013833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 203013834 . T . PASS END=203013834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 203013835 . G . PASS END=203013868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:19,0 chr1 203013869 . G . PASS END=203013870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 203013871 . A . PASS END=203013871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 203013872 . G . PASS END=203013875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 203013876 . A . PASS END=203013878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 203013879 . G . PASS END=203013879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:16,0 chr1 203013880 . G . PASS END=203013895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,637:0,54,255:18,0 chr1 203013896 . C . PASS END=203013896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 203013897 . C . PASS END=203013913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 203014496 . G . PASS END=203014517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:24:0,68,992:0,68,255:26,0 chr1 203014518 . A . PASS END=203014520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 203014521 . T . PASS END=203014521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 203014522 . G . PASS END=203014534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:28,0 chr1 203014535 . G . PASS END=203014537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 203014538 . A . PASS END=203014553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:28,0 chr1 203014554 . T . PASS END=203014554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 203014555 . G . PASS END=203014666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:28:0,81,1055:0,84,255:40,0 chr1 203014667 . C . PASS END=203014687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr1 203014969 . G . PASS END=203014980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,104,1480:0,104,255:40,0 chr1 203014981 . A . PASS END=203015057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,112,1800:0,112,255:40,0 chr1 203015058 . T . PASS END=203015094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,130,255:40,0 chr1 203015095 . A C, 50.00 PASS DP=57;MQ=249.61;MQRankSum=6.004;ReadPosRankSum=2.982;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,33,0:0.579,0.000:57:9,18,0:15,15,0:47:85,0,48,1164,829,1994:255,0,255:20,0:5.0000e+01,8.0247e-05,5.0713e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,17,7,26:16,8,16,17 chr1 203015096 . A . PASS END=203015115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,117,1755:0,135,255:40,0 chr1 203015376 . T . PASS END=203015387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,930:0,72,255:24,0 chr1 203015388 . G . PASS END=203015388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr1 203015389 . C . PASS END=203015404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:30,0 chr1 203015405 . G . PASS END=203015405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 203015406 . C . PASS END=203015436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr1 203015437 . A . PASS END=203015437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 203015438 . G . PASS END=203015438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 203015439 . A . PASS END=203015439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 203015440 . C . PASS END=203015456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr1 203015457 . A . PASS END=203015457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,922:0,76,255:29,0 chr1 203015458 . C . PASS END=203015462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 203015463 . C . PASS END=203015463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:29,0 chr1 203015464 . C . PASS END=203015470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1161:0,80,255:30,0 chr1 203015471 . G . PASS END=203015471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 203015472 . G . PASS END=203015491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:29,0 chr1 203015492 . A . PASS END=203015498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 203015499 . G . PASS END=203015499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:23,0 chr1 203015500 . C . PASS END=203015510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 203017355 . G . PASS END=203017438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,117,1800:0,117,255:40,0 chr1 203017699 . A . PASS END=203017708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:33:0,99,1247:0,99,255:37,0 chr1 203017709 . A . PASS END=203017722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:37:0,101,1410:0,101,255:37,0 chr1 203017723 . G . PASS END=203017723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr1 203017724 . A . PASS END=203017789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:36:0,88,1191:0,88,255:40,0 chr1 203017790 . A . PASS END=203017790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:37,0 chr1 203017791 . C . PASS END=203017811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,101,255:39,0 chr1 203017812 . G . PASS END=203017812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1263:0,64,255:28,0 chr1 203017813 . A . PASS END=203017813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:38:0,93,1395:0,97,255:30,0 chr1 203017814 . A . PASS END=203017814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1219:0,56,255:29,0 chr1 203017815 . G . PASS END=203017816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,108,255:31,0 chr1 203017817 . A . PASS END=203017817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr1 203017818 . G . PASS END=203017819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1133:0,93,255:31,0 chr1 203017820 . G . PASS END=203017821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:30,0 chr1 203017822 . A . PASS END=203017822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,915:0,43,255:28,0 chr1 203017823 . T . PASS END=203017825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 203017826 . C . PASS END=203017826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 203017827 . T . PASS END=203017827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 203017828 . G . PASS END=203017828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 203017829 . C . PASS END=203017829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 203017830 . C . PASS END=203017830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 203017831 . C . PASS END=203017831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:4:31:0,4,839:0,4,255:26,0 chr1 203017832 . T . PASS END=203017833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 203017834 . G . PASS END=203017834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 203017835 . A . PASS END=203017835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,1006:0,43,255:24,0 chr1 203017836 . G . PASS END=203017836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 203017837 . G . PASS END=203017837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:27,0 chr1 203017838 . A . PASS END=203017838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:24,0 chr1 203017839 . G . PASS END=203017839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:26,0 chr1 203017840 . A . PASS END=203017842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1031:0,63,255:24,0 chr1 203018046 . A . PASS END=203018063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1355:0,95,255:37,0 chr1 203018064 . T . PASS END=203018064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1169:0,61,255:34,0 chr1 203018065 . T . PASS END=203018106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,92,255:36,0 chr1 203018107 . A . PASS END=203018108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 203018804 . G . PASS END=203018804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 203018805 . G . PASS END=203018805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 203018806 . C . PASS END=203018810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1005:0,87,255:29,0 chr1 203018811 . T . PASS END=203018811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr1 203018812 . G . PASS END=203018814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 203018815 . T . PASS END=203018815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,942:0,48,255:28,0 chr1 203018816 . G . PASS END=203018816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr1 203018817 . A . PASS END=203018817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 203018818 . A . PASS END=203018818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 203018819 . G . PASS END=203018821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr1 203018822 . A . PASS END=203018822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:27,0 chr1 203018823 . T . PASS END=203018827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203018828 . A . PASS END=203018828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,790:0,21,255:24,0 chr1 203018829 . A . PASS END=203018831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 203018832 . T . PASS END=203018832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 203018833 . G . PASS END=203018833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203018834 . C . PASS END=203018834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 203018835 . G . PASS END=203018842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 203018843 . G . PASS END=203018843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,848:0,61,255:25,0 chr1 203018844 . T . PASS END=203018846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 203018847 . A . PASS END=203018852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:25,0 chr1 203018853 . T . PASS END=203018853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,921:0,51,255:22,0 chr1 203018854 . G . PASS END=203018876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,741:0,61,255:26,0 chr1 203018877 . T . PASS END=203018877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:22,0 chr1 203018878 . G . PASS END=203018880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 203018881 . T . PASS END=203018881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr1 203018882 . G . PASS END=203018882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 203018883 . G . PASS END=203018883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 203018884 . C . PASS END=203018887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 203018888 . C . PASS END=203018895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,855:0,56,255:19,0 chr1 203020897 . G . PASS END=203020899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203020900 . G . PASS END=203020900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 203020901 . C . PASS END=203020934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1093:0,87,255:33,0 chr1 203020935 . T . PASS END=203020935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 203020936 . G . PASS END=203020950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 203020951 . C . PASS END=203020970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,862:0,61,255:25,0 chr1 203020971 . G . PASS END=203020972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 203020973 . C . PASS END=203020986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,842:0,72,255:25,0 chr1 203020987 . G . PASS END=203020988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 203020989 . G . PASS END=203020991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,864:0,72,255:24,0 chr1 203020992 . A . PASS END=203020992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 203020993 . A . PASS END=203020993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 203020994 . G . PASS END=203021003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 203021004 . A . PASS END=203021005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 203022874 . T . PASS END=203022882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:19,0 chr1 203022883 . C . PASS END=203022902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,679:0,60,255:25,0 chr1 203022903 . C . PASS END=203022903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 203022904 . T . PASS END=203022912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr1 203022913 . G . PASS END=203022921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 203022922 . A . PASS END=203022922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 203022923 . G . PASS END=203022935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:31,0 chr1 203022936 . T . PASS END=203022936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:30,0 chr1 203022937 . T . PASS END=203022944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 203022945 . A . PASS END=203022945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr1 203022946 . C . PASS END=203022967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 203022968 . G . PASS END=203022989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:23,0 chr1 203022990 . T . PASS END=203022990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 203022991 . G . PASS END=203023007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr1 203023008 . T . PASS END=203023008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 203023009 . C . PASS END=203023013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 203023014 . C . PASS END=203023014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 203023015 . C . PASS END=203023020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 203023021 . C . PASS END=203023023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 203023024 . C . PASS END=203023028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 203023029 . A . PASS END=203023030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 203023031 . G . PASS END=203023031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 203023032 . C . PASS END=203023036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 203023037 . A . PASS END=203023039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 203023040 . C . PASS END=203023051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr1 203023052 . C . PASS END=203023065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 203023066 . G . PASS END=203023088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr1 203023089 . G . PASS END=203023089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 203023186 . C . PASS END=203023231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1169:0,80,255:37,0 chr1 203023232 . G . PASS END=203023232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 203023233 . G . PASS END=203023251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 203024560 . G . PASS END=203024566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:18,0 chr1 203024567 . C . PASS END=203024567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 203024568 . A . PASS END=203024572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,636:0,54,255:19,0 chr1 203024573 . G . PASS END=203024590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,721:0,60,255:23,0 chr1 203024591 . C . PASS END=203024591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 203024592 . T . PASS END=203024614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,961:0,75,255:26,0 chr1 203024615 . C . PASS END=203024729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1241:0,81,255:40,0 chr1 203024730 . G . PASS END=203024760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:97:38:0,97,1327:0,97,255:40,0 chr1 203024761 . T . PASS END=203024761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:32,0 chr1 203024762 . G . PASS END=203024766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1350:0,111,255:32,0 chr1 203024767 . C T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.189;ReadPosRankSum=3.090;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,22,0:0.579,0.000:38:9,12,0:7,10,0:47:85,0,48,766,572,1338:255,0,255:14,0:5.0000e+01,7.8435e-05,5.0936e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,7,15:5,11,7,15 chr1 203024768 . C . PASS END=203024791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1188:0,85,255:33,0 chr1 203024792 . A . PASS END=203024800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:28:0,66,990:0,83,255:23,0 chr1 203025248 . C . PASS END=203025276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:38:0,96,1440:0,110,255:40,0 chr1 203025277 . G . PASS END=203025283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:33,0 chr1 203025503 . T . PASS END=203025518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,108,1597:0,108,255:40,0 chr1 203025519 . A . PASS END=203025519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1673:0,75,255:40,0 chr1 203025520 . A . PASS END=203025545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:47:0,94,1515:0,94,255:40,0 chr1 203025546 . T . PASS END=203025582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:52:0,120,1800:0,132,255:40,0 chr1 203025583 . G A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=2.044;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,29,0:0.580,0.000:50:10,16,0:11,13,0:48:85,0,48,904,751,1655:255,0,255:21,0:5.0000e+01,7.5847e-05,5.1265e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,13,16:11,10,12,17 chr1 203025584 . C . PASS END=203025604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:85:44:0,85,1420:0,85,255:40,0 chr1 203025605 . C . PASS END=203025605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1471:0,60,255:35,0 chr1 203025606 . A . PASS END=203025609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1395:0,115,255:38,0 chr1 203025610 . A . PASS END=203025610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:30,0 chr1 203025611 . G . PASS END=203025620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,99,255:31,0 chr1 203025621 . A . PASS END=203025624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:29,0 chr1 203025625 . A . PASS END=203025625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 203025626 . G . PASS END=203025630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 203025631 . C . PASS END=203025636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1023:0,71,255:27,0 chr1 203025912 . T . PASS END=203025949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:26,0 chr1 203025950 . A . PASS END=203025952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203025953 . G . PASS END=203026028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,693:0,63,255:26,0 chr1 203026029 . G . PASS END=203026032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 203026033 . A . PASS END=203026033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:17,0 chr1 203026034 . A . PASS END=203026035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:17,0 chr1 203026036 . G . PASS END=203026036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr1 203026037 . G . PASS END=203026047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:16,0 chr1 203026048 . C . PASS END=203026061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr1 203026062 . T . PASS END=203026062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 203026063 . G . PASS END=203026065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 203026066 . G . PASS END=203026066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 203026067 . C . PASS END=203026078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 203028306 . T . PASS END=203028306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 203028307 . T . PASS END=203028312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1103:0,90,255:31,0 chr1 203028313 . A . PASS END=203028313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 203028314 . A . PASS END=203028322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 203028323 . G . PASS END=203028323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 203028324 . A . PASS END=203028326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 203028327 . T . PASS END=203028328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 203028329 . A . PASS END=203028335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1263:0,89,255:35,0 chr1 203028336 . A . PASS END=203028336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1169:0,55,255:32,0 chr1 203028337 . G . PASS END=203028399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1158:0,87,255:38,0 chr1 203028898 . A . PASS END=203028979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1059:0,83,255:40,0 chr1 203029345 . C . PASS END=203029346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 203029347 . C . PASS END=203029347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 203029348 . T . PASS END=203029367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,900:0,69,255:26,0 chr1 203029368 . G . PASS END=203029380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr1 203029381 . T . PASS END=203029381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 203029382 . G . PASS END=203029389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 203029390 . A . PASS END=203029390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 203029391 . A . PASS END=203029471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1009:0,80,255:34,0 chr1 203029472 . G . PASS END=203029498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr1 203029499 . A . PASS END=203029499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:19,0 chr1 203029500 . G . PASS END=203029515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:21,0 chr1 203029516 . A . PASS END=203029532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,630:0,41,255:19,0 chr1 203029533 . C . PASS END=203029533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:18:0,27,405:0,54,255:9,0 chr1 203029534 . A . PASS END=203029542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:10,0 chr1 203029543 . A . PASS END=203029545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:10:0,27,405:0,30,255:9,0 chr1 203030098 . T . PASS END=203030108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,104,1220:0,104,255:40,0 chr1 203030109 . T . PASS END=203030160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:42:0,91,1537:0,91,255:40,0 chr1 203030780 . G . PASS END=203030786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 203030787 . A . PASS END=203030804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1008:0,68,255:27,0 chr1 203030805 . A . PASS END=203030805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 203030806 . G . PASS END=203030806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 203032956 . A . PASS END=203032959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 203032960 . T . PASS END=203032981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:17,0 chr1 203032982 . T . PASS END=203032982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 203032983 . G . PASS END=203033001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr1 203033002 . G . PASS END=203033002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 203033003 . G . PASS END=203033018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,615:0,41,255:19,0 chr1 203033019 . C . PASS END=203033020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 203033021 . C . PASS END=203033026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 203033027 . G . PASS END=203033027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 203033028 . T . PASS END=203033028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 203033029 . A . PASS END=203033030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 203033031 . C . PASS END=203033075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 203033076 . C . PASS END=203033076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:15,0 chr1 203033077 . A . PASS END=203033091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 203033092 . A . PASS END=203033092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:13,0 chr1 203033093 . C . PASS END=203033100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 203033101 . T . PASS END=203033111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 203033112 . A . PASS END=203033112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 203033113 . T . PASS END=203033113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 203033114 . G . PASS END=203033114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr1 203033115 . G . PASS END=203033117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 203033118 . G . PASS END=203033118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 203033119 . A . PASS END=203033131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 203036823 . A . PASS END=203036827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 203036828 . G . PASS END=203036920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1243:0,87,255:40,0 chr1 203037581 . A . PASS END=203037589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:18,0 chr1 203037590 . T . PASS END=203037590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:16,0 chr1 203037591 . C . PASS END=203037606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,629:0,54,255:19,0 chr1 203037607 . G . PASS END=203037607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 203037608 . T . PASS END=203037608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr1 203037609 . G . PASS END=203037623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 203037624 . G . PASS END=203037636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:31,0 chr1 203037637 . C . PASS END=203037637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr1 203037638 . G . PASS END=203037718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:32:0,91,1189:0,91,255:40,0 chr1 203037719 . T . PASS END=203037719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:44:46:0,44,1512:0,44,255:40,0 chr1 203037720 . G . PASS END=203037745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:89:40:0,89,1504:0,89,255:40,0 chr1 203037746 . A . PASS END=203037746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:31,0 chr1 203037747 . G . PASS END=203037756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,88,255:33,0 chr1 203040820 . G . PASS END=203040853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,114,1745:0,114,255:40,0 chr1 203040854 . T . PASS END=203040884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:50:0,118,1800:0,118,255:40,0 chr1 203040885 . T . PASS END=203040888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 203044705 . G . PASS END=203044710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr1 203044711 . G . PASS END=203044713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 203044714 . A . PASS END=203044733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 203044734 . C . PASS END=203044762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,582:0,45,255:18,0 chr1 203044763 . A . PASS END=203044763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr1 203044764 . G . PASS END=203044804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,629:0,43,255:19,0 chr1 203044805 . C . PASS END=203044828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 203044829 . C . PASS END=203044875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:19,0 chr1 203044876 . A . PASS END=203044893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:14:0,39,585:0,42,255:13,0 chr1 203045469 . C . PASS END=203045477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1164:0,83,255:34,0 chr1 203045478 . A . PASS END=203045478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:32,0 chr1 203045479 . C . PASS END=203045492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1174:0,85,255:34,0 chr1 203045493 . A . PASS END=203045493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:29,0 chr1 203045494 . C . PASS END=203045501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:31,0 chr1 203045502 . C . PASS END=203045502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:26,0 chr1 203045503 . C . PASS END=203045503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 203045504 . G . PASS END=203045504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 203045505 . C . PASS END=203045511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 203045512 . G . PASS END=203045513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 203045514 . A . PASS END=203045515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203045516 . T . PASS END=203045516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:27,0 chr1 203045517 . A . PASS END=203045518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203045608 . C . PASS END=203045610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 203045611 . C . PASS END=203045612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 203045613 . A . PASS END=203045620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 203045621 . C . PASS END=203045644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,511:0,42,255:15,0 chr1 203045645 . T . PASS END=203045645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr1 203045646 . C . PASS END=203045698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,612:0,44,255:19,0 chr1 203045699 . T . PASS END=203045699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:17,0 chr1 203045700 . G . PASS END=203045706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 203045707 . T . PASS END=203045709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 203045710 . T . PASS END=203045711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 203045712 . A . PASS END=203045713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 203045714 . T . PASS END=203045714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 203045715 . C . PASS END=203045742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,848:0,62,255:26,0 chr1 203045743 . A . PASS END=203045750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 203045751 . G . PASS END=203045752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 203045753 . C . PASS END=203045753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:26,0 chr1 203045754 . A . PASS END=203045758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203045759 . G . PASS END=203045759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 203045760 . G . PASS END=203045760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203045761 . T . PASS END=203045761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr1 203045762 . T . PASS END=203045788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 203045789 . G . PASS END=203045791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 203045792 . A . PASS END=203045792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,877:0,54,255:24,0 chr1 203045793 . G . PASS END=203045830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,909:0,62,255:26,0 chr1 203045831 . C . PASS END=203045834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 203045835 . T . PASS END=203045835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 203045836 . G . PASS END=203045863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,86,255:32,0 chr1 203045864 . C . PASS END=203045874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1103:0,90,255:30,0 chr1 203045875 . A . PASS END=203045875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 203045876 . G . PASS END=203045890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:30,0 chr1 203045891 . G . PASS END=203045895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 203045896 . G . PASS END=203045900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 203045901 . G A, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,14,0:0,15,0:84:172,87,0,1120,87,1120:255,90,0:0,0:1.3428e+02,8.4281e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,18:0,0,18,11 chr1 203045902 . T . PASS END=203045902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203045903 . C . PASS END=203045929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,68,255:24,0 chr1 203045930 . C . PASS END=203045938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 203045939 . T . PASS END=203045957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr1 203053038 . T . PASS END=203053159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:41:0,80,1457:0,80,255:40,0 chr1 203053775 . C . PASS END=203053785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 203053786 . G . PASS END=203053786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 203053787 . C . PASS END=203053789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 203053790 . T . PASS END=203053790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 203053791 . G . PASS END=203053798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 203053799 . G . PASS END=203053799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203053800 . T . PASS END=203053800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 203053801 . G . PASS END=203053805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 203053806 . G . PASS END=203053856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1156:0,80,255:33,0 chr1 203054619 . C . PASS END=203054643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:17,0 chr1 203054644 . C . PASS END=203054646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 203054647 . T . PASS END=203054647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 203054648 . A . PASS END=203054648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 203054649 . G . PASS END=203054650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 203054651 . G . PASS END=203054651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 203054652 . G . PASS END=203054656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 203054657 . C . PASS END=203054657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:17,0 chr1 203054658 . A . PASS END=203054662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr1 203054663 . C . PASS END=203054665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 203054666 . C . PASS END=203054666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr1 203054667 . C . PASS END=203054677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 203054678 . A . PASS END=203054678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 203054679 . G . PASS END=203054739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,776:0,62,255:26,0 chr1 203054740 . G . PASS END=203054740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:23,0 chr1 203054741 . G . PASS END=203054781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 203054782 . G . PASS END=203054782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 203054783 . C . PASS END=203054799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 203054800 . A . PASS END=203054816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,698:0,46,255:19,0 chr1 203054817 . C . PASS END=203054822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 203054823 . C . PASS END=203054825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 203054826 . C . PASS END=203054843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr1 203054844 . C . PASS END=203054846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 203054847 . G . PASS END=203054847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 203054848 . T . PASS END=203054851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 203054852 . C . PASS END=203054852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:19,0 chr1 203054853 . G . PASS END=203054895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,577:0,44,255:19,0 chr1 203054896 . C . PASS END=203054899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr1 203054900 . G . PASS END=203054915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,590:0,45,255:16,0 chr1 203054916 . G . PASS END=203054916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 203054917 . G . PASS END=203054938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,46,255:19,0 chr1 203054939 . C . PASS END=203054940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 203054941 . A . PASS END=203054943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 203054944 . G . PASS END=203054946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 203054947 . C . PASS END=203054947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 203054948 . C . PASS END=203054948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 203054949 . T . PASS END=203054949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:21,0 chr1 203054950 . G . PASS END=203054955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 203054956 . T . PASS END=203054956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 203054957 . C . PASS END=203054966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,914:0,62,255:26,0 chr1 203054967 . G . PASS END=203054977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:29,0 chr1 203054978 . T . PASS END=203054978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 203054979 . C . PASS END=203054991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:31,0 chr1 203054992 . G . PASS END=203054992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 203054993 . G . PASS END=203054993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 203054994 . T . PASS END=203054994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 203054995 . G . PASS END=203055012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1090:0,82,255:35,0 chr1 203055013 . T . PASS END=203055013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:34,0 chr1 203055014 . G . PASS END=203055070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1141:0,82,255:37,0 chr1 203055071 . A . PASS END=203055081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:23,0 chr1 203055082 . A . PASS END=203055089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,53,255:19,0 chr1 203097970 . A . PASS END=203097977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr1 203097978 . C . PASS END=203097981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203097982 . A . PASS END=203097991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 203097992 . T . PASS END=203097998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 203097999 . C . PASS END=203098000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,984:0,65,255:27,0 chr1 203098001 . C . PASS END=203098005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1054:0,84,255:29,0 chr1 203098006 . A . PASS END=203098006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 203098007 . T . PASS END=203098008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 203098009 . G . PASS END=203098012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 203098013 . T . PASS END=203098017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 203098018 . G . PASS END=203098026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 203098027 . G . PASS END=203098300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1210:0,86,255:40,0 chr1 203098301 . T . PASS END=203098310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:24,0 chr1 203134184 . G . PASS END=203134185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 203134186 . G . PASS END=203134196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 203134197 . T . PASS END=203134197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 203134198 . G . PASS END=203134200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 203134201 . T . PASS END=203134201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 203134202 . G . PASS END=203134204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 203134205 . A . PASS END=203134214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:5,0 chr1 203134215 . T . PASS END=203134215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 203134216 . C . PASS END=203134220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 203134252 . A . PASS END=203134258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 203134259 . T . PASS END=203134259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 203134260 . C . PASS END=203134272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 203134273 . G . PASS END=203134273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 203134274 . C . PASS END=203134284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 203134285 . G . PASS END=203134285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 203134286 . A . PASS END=203134286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr1 203134287 . G . PASS END=203134287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 203134288 . G . PASS END=203134288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 203134289 . G . PASS END=203134304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,451:0,36,255:13,0 chr1 203134305 . C . PASS END=203134306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 203134307 . C . PASS END=203134323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr1 203134324 . C . PASS END=203134324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 203134325 . C . PASS END=203134326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 203134327 . C . PASS END=203134328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 203134329 . G . PASS END=203134330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 203134331 . G . PASS END=203134331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 203134332 . G . PASS END=203134332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 203134333 . G . PASS END=203134334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 203134335 . C . PASS END=203134337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 203134338 . T . PASS END=203134338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr1 203134339 . T . PASS END=203134351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:18,0 chr1 203134352 . G . PASS END=203134352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 203134353 . A . PASS END=203134358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,737:0,57,255:19,0 chr1 203134359 . A . PASS END=203134359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 203134360 . T . PASS END=203134388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:26,1 chr1 203134389 . G . PASS END=203134392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 203134393 . A . PASS END=203134393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 203134394 . A . PASS END=203134617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:31:0,85,1127:0,85,255:40,2 chr1 203134618 . C . PASS END=203134618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1465:0,57,255:35,2 chr1 203134619 . C . PASS END=203134989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:85:40:0,85,1451:0,85,255:40,0 chr1 203134990 . A . PASS END=203134991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1355:0,76,255:38,0 chr1 203134992 . T . PASS END=203135020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,85,255:39,0 chr1 203135021 . A . PASS END=203135021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 203135022 . T . PASS END=203135027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 203135028 . G . PASS END=203135028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:28,0 chr1 203135452 . C . PASS END=203135452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 203137787 . T . PASS END=203137790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:29,0 chr1 203137791 . T . PASS END=203137794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,83,255:25,0 chr1 203137795 . C . PASS END=203137795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1024:0,38,255:24,0 chr1 203137796 . G . PASS END=203137803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1022:0,68,255:26,0 chr1 203138034 . C . PASS END=203138210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:35:0,92,1332:0,92,255:40,0 chr1 203138211 . T . PASS END=203138211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:26,0 chr1 203138212 . G . PASS END=203138212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:25,0 chr1 203138213 . A . PASS END=203138215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 203138216 . T . PASS END=203138216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 203138217 . T . PASS END=203138220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,92,255:27,0 chr1 203138381 . C . PASS END=203138386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr1 203138387 . T . PASS END=203138387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 203138388 . G . PASS END=203138396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,660:0,51,255:18,0 chr1 203138397 . A . PASS END=203138397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 203138398 . C . PASS END=203138434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,605:0,40,255:19,0 chr1 203138435 . G . PASS END=203138435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 203138436 . G . PASS END=203138447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,653:0,43,255:19,0 chr1 203138448 . A . PASS END=203138450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,1 chr1 203138451 . G . PASS END=203138456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 203138457 . G . PASS END=203138457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:17,0 chr1 203138458 . T . PASS END=203138464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,698:0,57,255:19,0 chr1 203138465 . G . PASS END=203138469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 203138470 . C . PASS END=203138495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,568:0,44,255:19,0 chr1 203138496 . C . PASS END=203138497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 203138498 . T . PASS END=203138498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,530:0,51,255:17,0 chr1 203138499 . T . PASS END=203138499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 203138500 . T . PASS END=203138515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 203138516 . A . PASS END=203138516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 203138517 . T . PASS END=203138517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 203139419 . C . PASS END=203139420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 203139421 . G . PASS END=203139422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 203139423 . C . PASS END=203139439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1000:0,68,255:26,0 chr1 203139440 . G . PASS END=203139444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1011:0,87,255:29,0 chr1 203139445 . T . PASS END=203139445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 203139446 . T . PASS END=203139562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1133:0,80,255:40,0 chr1 203139563 . G . PASS END=203139578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:24,0 chr1 203140189 . C . PASS END=203140195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,651:0,41,255:19,0 chr1 203140196 . T . PASS END=203140196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,580:0,24,255:17,0 chr1 203140197 . T . PASS END=203140203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:19,0 chr1 203140204 . T . PASS END=203140204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,584:0,18,255:18,0 chr1 203140205 . G . PASS END=203140207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:20:0,49,723:0,49,255:19,0 chr1 203140208 . T . PASS END=203140214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 203140215 . C . PASS END=203140215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:22,0 chr1 203140216 . C . PASS END=203140216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 203140217 . A . PASS END=203140217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 203140218 . T . PASS END=203140218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 203140219 . G . PASS END=203140220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 203140221 . A . PASS END=203140221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 203140222 . G . PASS END=203140227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,971:0,84,255:28,0 chr1 203140228 . G . PASS END=203140230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1039:0,71,255:26,0 chr1 203140231 . C . PASS END=203140233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 203140234 . T . PASS END=203140236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:28,0 chr1 203140237 . G . PASS END=203140237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 203140238 . T . PASS END=203140238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 203140239 . T . PASS END=203140239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:28,0 chr1 203140240 . G . PASS END=203140241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 203140242 . C . PASS END=203140243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 203140244 . G . PASS END=203140247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 203140248 . C . PASS END=203140248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 203140249 . C . PASS END=203140252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 203140253 . G . PASS END=203140253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 203140254 . G . PASS END=203140257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 203140258 . C . PASS END=203140261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 203140262 . C . PASS END=203140264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 203140265 . T . PASS END=203140265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:25,0 chr1 203140266 . G . PASS END=203140266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 203140267 . A . PASS END=203140275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,990:0,68,255:26,0 chr1 203140276 . A . PASS END=203140276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203140277 . T . PASS END=203140277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 203140278 . T . PASS END=203140278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203140279 . G . PASS END=203140291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr1 203140292 . T . PASS END=203140292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:21,0 chr1 203140293 . C . PASS END=203140294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 203140295 . A . PASS END=203140296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:23,0 chr1 203140297 . G . PASS END=203140302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 203140303 . G . PASS END=203140303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 203140304 . A . PASS END=203140304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 203140305 . T . PASS END=203140306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 203140307 . C . PASS END=203140308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:24:0,44,845:0,44,255:22,0 chr1 203140309 . G . PASS END=203140309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 203140310 . C . PASS END=203140310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 203140311 . T . PASS END=203140323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 203140324 . T . PASS END=203140324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,759:0,22,255:19,0 chr1 203140325 . T . PASS END=203140325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 203140326 . T . PASS END=203140327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 203140328 . T . PASS END=203140328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 203140511 . C . PASS END=203140513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 203140514 . T . PASS END=203140527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:18,0 chr1 203140528 . A . PASS END=203140528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 203140529 . T . PASS END=203140541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,654:0,54,255:19,0 chr1 203140542 . C . PASS END=203140545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 203140546 . A . PASS END=203140546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 203140547 . G . PASS END=203140548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,705:0,60,255:20,0 chr1 203140549 . T . PASS END=203140549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 203140550 . C . PASS END=203140554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 203140555 . A . PASS END=203140555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 203140556 . C . PASS END=203140556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 203140557 . G . PASS END=203140589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:18:0,50,674:0,50,255:19,0 chr1 203140590 . G . PASS END=203140594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:20,0 chr1 203140595 . G . PASS END=203140595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 203140596 . G . PASS END=203140596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 203140597 . G . PASS END=203140597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 203140598 . C . PASS END=203140604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 203140605 . A . PASS END=203140637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,675:0,44,255:19,0 chr1 203140638 . C . PASS END=203140638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 203140639 . A . PASS END=203140640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 203140641 . G . PASS END=203140642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 203140643 . T . PASS END=203140645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 203140646 . C . PASS END=203140646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 203140647 . C . PASS END=203140647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 203140648 . C . PASS END=203140648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr1 203140649 . G . PASS END=203140649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 203140650 . C . PASS END=203140664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,482:0,31,255:13,0 chr1 203140665 . A . PASS END=203140665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 203140666 . T . PASS END=203140690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr1 203140691 . G . PASS END=203140696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 203140697 . T . PASS END=203140697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 203140698 . A . PASS END=203140698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 203140699 . G . PASS END=203140705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 203140706 . C . PASS END=203140706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 203141080 . C . PASS END=203141088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr1 203141089 . G . PASS END=203141089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 203141090 . A . PASS END=203141091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr1 203141092 . T . PASS END=203141092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 203141093 . T . PASS END=203141106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:19,0 chr1 203141107 . C . PASS END=203141113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 203141114 . A . PASS END=203141114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 203141115 . C . PASS END=203141120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 203141121 . G . PASS END=203141122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 203141123 . A . PASS END=203141133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr1 203141134 . A . PASS END=203141134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 203141135 . C . PASS END=203141137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 203141138 . A . PASS END=203141138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 203141139 . G . PASS END=203141141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 203141142 . G . PASS END=203141142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 203141143 . G . PASS END=203141147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 203141148 . G . PASS END=203141168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 203143558 . C . PASS END=203143580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,751:0,47,255:19,0 chr1 203143581 . G . PASS END=203143583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr1 203143584 . T . PASS END=203143584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:18,0 chr1 203143585 . G . PASS END=203143611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:26,0 chr1 203143612 . C . PASS END=203143686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1072:0,84,255:39,0 chr1 203143687 . C . PASS END=203143687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr1 203143688 . C . PASS END=203143689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 203143690 . T . PASS END=203143695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 203143696 . G . PASS END=203143696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 203143697 . C . PASS END=203143700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 203143701 . G . PASS END=203143704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203143705 . T . PASS END=203143718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 203143719 . T . PASS END=203143719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:21,0 chr1 203143720 . C . PASS END=203143724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,908:0,61,255:21,0 chr1 203143725 . G C, 119.23 PASS DP=24;MQ=249.01;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,13,0:0,11,0:69:157,72,0,921,72,921:255,72,0:0,0:1.1923e+02,6.9230e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,17:0,0,10,14 chr1 203144455 . C . PASS END=203144499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:26,0 chr1 203144500 . T . PASS END=203144550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1111:0,84,255:31,0 chr1 203144551 . C . PASS END=203144551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 203144552 . A . PASS END=203144556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 203144557 . C . PASS END=203144580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,74,255:25,0 chr1 203144581 . T . PASS END=203144581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:20,0 chr1 203144582 . G . PASS END=203144589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 203144679 . C . PASS END=203144685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 203144686 . T . PASS END=203144686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,805:0,56,255:22,0 chr1 203144687 . G . PASS END=203144692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 203144693 . G . PASS END=203144693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 203144694 . C . PASS END=203144694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 203144695 . A . PASS END=203144696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 203144697 . G . PASS END=203144699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 203144700 . T . PASS END=203144702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr1 203144703 . T . PASS END=203144721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,734:0,63,255:22,0 chr1 203144722 . G . PASS END=203144722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr1 203144723 . G . PASS END=203144738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:25,0 chr1 203144739 . C . PASS END=203144739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 203144740 . C . PASS END=203144740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 203144741 . T . PASS END=203144757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 203144758 . C . PASS END=203144758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 203144759 . T . PASS END=203144853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1047:0,84,255:40,0 chr1 203144854 . A . PASS END=203144868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,992:0,65,255:27,0 chr1 203144869 . G . PASS END=203144869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:23,2 chr1 203144870 . T . PASS END=203144870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,860:0,12,255:23,2 chr1 203144871 . T . PASS END=203144871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:24,0 chr1 203144872 . T . PASS END=203144879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 203144880 . T . PASS END=203144883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 203148573 . C . PASS END=203148595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1019:0,84,255:34,0 chr1 203148596 . T . PASS END=203148630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1199:0,92,255:35,0 chr1 203148631 . C . PASS END=203148631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:33,0 chr1 203148632 . C . PASS END=203148632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 203148633 . A G, 151.88 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,19,0:0,16,0:102:190,105,0,1328,105,1328:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,15:0,0,18,17 chr1 203148634 . C . PASS END=203148664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:34,0 chr1 203148665 . G . PASS END=203148670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,96,255:26,0 chr1 203148671 . A . PASS END=203148694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:23,0 chr1 203148695 . T . PASS END=203148702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr1 203148703 . A . PASS END=203148706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:20:0,39,585:0,60,255:13,0 chr1 203148707 . A . PASS END=203148708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 203148709 . T . PASS END=203148713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:18:0,39,585:0,54,255:13,0 chr1 203148889 . C . PASS END=203148960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1133:0,82,255:40,0 chr1 203148961 . G . PASS END=203148961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr1 203148962 . C . PASS END=203148983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,98,255:38,0 chr1 203148984 . C . PASS END=203148984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:26,0 chr1 203148985 . T . PASS END=203148999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1035:0,84,255:29,0 chr1 203149000 . A . PASS END=203149005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1017:0,73,255:28,0 chr1 203149598 . C . PASS END=203149603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:25,0 chr1 203149604 . G . PASS END=203149774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:27:0,81,1024:0,81,255:40,0 chr1 203149775 . A . PASS END=203149780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,100,255:25,0 chr1 203150290 . A . PASS END=203150407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:34:0,96,1280:0,98,255:40,0 chr1 203150408 . A . PASS END=203150408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:31,0 chr1 203150409 . G . PASS END=203150413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:33,0 chr1 203151859 . T . PASS END=203151864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 203151865 . A . PASS END=203151874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 203151875 . T . PASS END=203151875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 203151876 . G . PASS END=203151936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1395:0,82,255:39,2 chr1 203151937 . T . PASS END=203151937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1426:0,54,255:37,2 chr1 203151938 . T . PASS END=203151980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1374:0,81,255:38,0 chr1 203152769 . C . PASS END=203152796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,778:0,61,255:26,0 chr1 203152797 . T . PASS END=203152798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 203152799 . T . PASS END=203152799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 203152800 . C . PASS END=203152819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1070:0,87,255:38,0 chr1 203152820 . G . PASS END=203152820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr1 203152821 . G . PASS END=203152904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1255:0,84,255:40,0 chr1 203152905 . G . PASS END=203152905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:29,0 chr1 203152906 . C . PASS END=203152906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 203152907 . T . PASS END=203152907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 203152908 . A . PASS END=203152919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,89,255:29,0 chr1 203153704 . C . PASS END=203153760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1113:0,80,255:36,0 chr1 203154312 . C . PASS END=203154314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,726:0,66,255:23,0 chr1 203154315 . T . PASS END=203154315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 203154316 . T . PASS END=203154316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 203154317 . C . PASS END=203154318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,766:0,52,255:21,0 chr1 203154319 . T . PASS END=203154322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 203154323 . T . PASS END=203154323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:22,0 chr1 203154324 . G . PASS END=203154326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 203154327 . T . PASS END=203154328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,994:0,68,255:27,0 chr1 203154329 . G . PASS END=203154333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:30,0 chr1 203154334 . T . PASS END=203154334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 203154335 . G . PASS END=203154384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:85:34:0,85,1196:0,85,255:40,0 chr1 203154385 . T . PASS END=203154385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:39,0 chr1 203154386 . T . PASS END=203154434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:38:0,96,1368:0,101,255:40,0 chr1 203154435 . G . PASS END=203154435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:31,0 chr1 203154436 . C . PASS END=203154448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1170:0,83,255:32,0 chr1 203154449 . G . PASS END=203154450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1094:0,77,255:28,0 chr1 203154451 . T . PASS END=203154453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 203154454 . C . PASS END=203154454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 203154455 . A . PASS END=203154461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 203154462 . T . PASS END=203154462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 203154463 . C . PASS END=203154479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:30,0 chr1 203154480 . C . PASS END=203154480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 203154481 . T . PASS END=203154494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 203154495 . A . PASS END=203154496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203154497 . C . PASS END=203154512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr1 203154513 . C . PASS END=203154513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 203155444 . A . PASS END=203155473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:45:0,119,1637:0,119,255:40,0 chr1 203155727 . C . PASS END=203155740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,119,1651:0,119,255:40,0 chr1 203155741 . T . PASS END=203155751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,130,255:40,0 chr1 203155882 . G C, 42.80 PASS DP=25;MQ=249.76;MQRankSum=3.932;ReadPosRankSum=3.117;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,8,0:0.320,0.000:25:14,2,0:3,6,0:42:78,0,50,278,608,886:224,0,255:16,0:4.2803e+01,2.4955e-04,5.3000e+01,2.7817e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,5,3:10,7,5,3 chr1 203185235 . G . PASS END=203185235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 203185263 . T . PASS END=203185263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 203185274 . G . PASS END=203185274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 203185288 . A . PASS END=203185288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 203185418 . G . PASS END=203185418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 203185567 . C . PASS END=203185567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 203185614 . C . PASS END=203185614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 203185737 . C . PASS END=203185737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 203185779 . G . PASS END=203185779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 203185874 . T . PASS END=203185874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 203185893 . T . PASS END=203185893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 203185898 . G . PASS END=203185898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 203185918 . C . PASS END=203185918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 203185932 . C . PASS END=203185932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 203185960 . G . PASS END=203185960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203186017 . T . PASS END=203186055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:34:0,99,1312:0,101,255:40,0 chr1 203186056 . C . PASS END=203186092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,102,1375:0,107,255:40,0 chr1 203186093 . G A, 47.25 PASS DP=37;MQ=250.00;MQRankSum=5.089;ReadPosRankSum=3.325;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,15,0:0.405,0.000:37:13,7,0:9,8,0:46:82,0,50,537,750,1287:255,0,255:19,0:4.7247e+01,1.0355e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,8,7,8:15,7,9,6 chr1 203186094 . C . PASS END=203186130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,89,255:34,0 chr1 203186131 . G . PASS END=203186131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 203186132 . G . PASS END=203186132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 203186133 . G . PASS END=203186143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:26,0 chr1 203186144 . T . PASS END=203186144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 203186145 . C . PASS END=203186154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,900:0,71,255:26,0 chr1 203186155 . C . PASS END=203186157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203186158 . G . PASS END=203186188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,67,255:26,0 chr1 203186189 . T . PASS END=203186190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 203186191 . C . PASS END=203186192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 203186193 . C . PASS END=203186208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,629:0,54,255:19,0 chr1 203186209 . A . PASS END=203186221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,724:0,60,255:22,0 chr1 203186222 . A . PASS END=203186222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 203186223 . C . PASS END=203186240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 203186241 . C . PASS END=203186241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 203186242 . T . PASS END=203186246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,779:0,69,255:24,0 chr1 203186247 . G . PASS END=203186247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 203186248 . C . PASS END=203186251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 203186252 . T . PASS END=203186252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 203186253 . A . PASS END=203186253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 203186254 . T . PASS END=203186254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 203186255 . G . PASS END=203186255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,775:0,25,255:17,0 chr1 203186256 . G . PASS END=203186261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 203186493 . T . PASS END=203186498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 203186499 . A . PASS END=203186499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 203186500 . T . PASS END=203186500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 203186863 . T . PASS END=203186863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:15:14:0,15,225:0,42,255:5,0 chr1 203186864 . TACTC T, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.200;ReadPosRankSum=-1.030;FractionInformativeReads=0.941;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,10,0:0.625,0.000:16:3,9,0:3,1,0:47:79,0,48,351,246,597:255,0,190:5,10:5.0000e+01,7.9730e-05,5.0792e+01,3.5687e+02,2.8039e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:4,2,5,5:3,3,4,6 chr1 203186867 . T . LowGQ END=203186869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,10:18:0:16:0,0,0:255,0,178:16,10 chr1 203186870 . G . PASS END=203186881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr1 203186882 . G . PASS END=203186887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 203186888 . G . PASS END=203186888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 203186889 . G . PASS END=203186892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 203186893 . A . PASS END=203186893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 203186894 . G . PASS END=203186903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:23,0 chr1 203186904 . G . PASS END=203186904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,786:0,41,255:22,0 chr1 203186905 . C . PASS END=203186916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:23,0 chr1 203186917 . G . PASS END=203186925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 203186926 . G . PASS END=203186942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr1 203186943 . C . PASS END=203186956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 203186957 . T . PASS END=203186957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr1 203186958 . G . PASS END=203186962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,56,255:18,0 chr1 203186963 . C T, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=1.767;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:6,10,0:4,3,0:48:85,0,49,465,358,823:255,0,255:8,0:5.0000e+01,6.9893e-05,5.2145e+01,4.5000e+02,3.9246e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,4,9:6,4,7,6 chr1 203186964 . G . PASS END=203186993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,698:0,54,255:19,0 chr1 203187163 . T . PASS END=203187163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr1 203187164 . C . PASS END=203187193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,787:0,66,255:25,0 chr1 203187194 . T . PASS END=203187194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 203187195 . C . PASS END=203187195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 203187196 . T . PASS END=203187196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 203187197 . C . PASS END=203187219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 203188344 . C . PASS END=203188355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,917:0,75,255:26,0 chr1 203188356 . G . PASS END=203188371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,944:0,84,255:30,0 chr1 203188372 . A . PASS END=203188372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:28,0 chr1 203188373 . A . PASS END=203188384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1101:0,90,255:31,0 chr1 203188385 . G . PASS END=203188385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 203188386 . G . PASS END=203188411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1103:0,93,255:32,0 chr1 203188412 . T . PASS END=203188417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 203188418 . C . PASS END=203188441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:29,0 chr1 203188442 . C . PASS END=203188447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 203188448 . A . PASS END=203188452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr1 203188453 . C . PASS END=203188453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:18,0 chr1 203188454 . A . PASS END=203188457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:54:25:0,54,810:0,62,255:19,0 chr1 203188466 . G . PASS END=203188466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:16,0 chr1 203188792 . T . PASS END=203188798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,619:0,51,255:17,0 chr1 203188799 . T . PASS END=203188799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 203188800 . A . PASS END=203188805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 203188806 . G . PASS END=203188806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 203188807 . C . PASS END=203188823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 203188824 . T . PASS END=203188824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 203188825 . G . PASS END=203188827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 203188828 . G . PASS END=203188828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 203188829 . G . PASS END=203188829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 203188830 . G . PASS END=203188835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 203188836 . G . PASS END=203188836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 203188837 . A . PASS END=203188838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 203188839 . T . PASS END=203188839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 203188840 . G . PASS END=203188842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 203188843 . A . PASS END=203188843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 203188844 . G . PASS END=203188857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr1 203188858 . G . PASS END=203188858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:23,0 chr1 203188859 . G . PASS END=203188879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr1 203188880 . G . PASS END=203188880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 203188881 . A . PASS END=203188881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 203188882 . G . PASS END=203188887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 203188888 . C . PASS END=203188889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 203188890 . G . PASS END=203188900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1247:0,86,255:30,0 chr1 203188901 . C . PASS END=203188901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 203188902 . G . PASS END=203188956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1217:0,93,255:33,0 chr1 203188957 . C . PASS END=203188977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:24,0 chr1 203191330 . C . PASS END=203191451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1103:0,80,255:40,0 chr1 203191452 . T . PASS END=203191452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:33,0 chr1 203191453 . C . PASS END=203191453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 203192253 . T . PASS END=203192253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 203192262 . C . PASS END=203192269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr1 203192270 . T . PASS END=203192270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 203192271 . T . PASS END=203192293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,955:0,72,255:26,0 chr1 203192294 . C . PASS END=203192294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 203192295 . C . PASS END=203192295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 203192296 . A . PASS END=203192339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:29:0,86,1033:0,86,255:33,0 chr1 203192340 . T . PASS END=203192340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 203192341 . T . PASS END=203192344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 203192345 . T . PASS END=203192345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 203192346 . C . PASS END=203192366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1103:0,90,255:31,0 chr1 203192367 . C . PASS END=203192367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 203192368 . T . PASS END=203192370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 203192371 . A . PASS END=203192371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 203192372 . A . PASS END=203192383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1066:0,87,255:30,0 chr1 203192384 . A . PASS END=203192386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 203192387 . C . PASS END=203192387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 203192610 . C . PASS END=203192610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr1 203192611 . G . PASS END=203192611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 203192623 . C . PASS END=203192628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 203192629 . C . PASS END=203192629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:23,0 chr1 203192630 . A . PASS END=203192631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 203192632 . G . PASS END=203192667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1103:0,80,255:38,0 chr1 203192668 . C . PASS END=203192668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:37,0 chr1 203192669 . T . PASS END=203192770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1255:0,86,255:40,0 chr1 203192771 . G . PASS END=203192782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,990:0,81,255:26,0 chr1 203192783 . G . PASS END=203192788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:23,0 chr1 203194162 . C . PASS END=203194162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1490:0,120,255:40,0 chr1 203194175 . C . PASS END=203194185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,112,1776:0,112,255:40,0 chr1 203194186 . C T, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=3.788;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,28,0:0.571,0.000:49:13,15,0:8,13,0:48:85,0,48,973,714,1687:255,0,255:22,0:5.0000e+01,7.6105e-05,5.1226e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,17,11:11,10,18,10 chr1 203194187 . G . PASS END=203194223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:98:48:0,98,1784:0,98,255:40,0 chr1 203194224 . T . PASS END=203194232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,138,255:40,0 chr1 203194797 . A . PASS END=203194799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,717:0,60,255:21,0 chr1 203194800 . T . PASS END=203194800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 203194801 . T . PASS END=203194801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 203194802 . C . PASS END=203194802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 203194803 . T . PASS END=203194804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 203194805 . C . PASS END=203194805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 203194806 . A . PASS END=203194835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,825:0,66,255:26,0 chr1 203194836 . T . PASS END=203194845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,970:0,81,255:29,0 chr1 203194846 . C . PASS END=203194846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 203194847 . A . PASS END=203194889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1037:0,83,255:35,0 chr1 203194890 . A . PASS END=203194890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1127:0,61,255:31,0 chr1 203194891 . T . PASS END=203194955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,92,255:35,0 chr1 203194956 . T . PASS END=203194956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 203194957 . G . PASS END=203194957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:26,0 chr1 203194958 . G . PASS END=203194963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1086:0,74,255:27,0 chr1 203194964 . G . PASS END=203194965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:25,0 chr1 203194966 . T . PASS END=203194976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,61,255:24,0 chr1 203194977 . C . PASS END=203194994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 203194995 . G . PASS END=203194998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 203195004 . C . PASS END=203195004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 203195006 . G . PASS END=203195006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 203197661 . C . PASS END=203197690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1249:0,86,255:33,0 chr1 203197694 . G . PASS END=203197694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 203198740 . C . PASS END=203198764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,118,1800:0,118,255:40,0 chr1 203198777 . C . PASS END=203198777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr1 203198804 . C . PASS END=203198804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 203198818 . C . PASS END=203198818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 203274735 . A . PASS END=203274743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:18,0 chr1 203274744 . G . PASS END=203274744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 203274745 . G . PASS END=203274750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 203274751 . G . PASS END=203274784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:23,0 chr1 203274785 . G . PASS END=203274785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 203274786 . G . PASS END=203274810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:23:0,67,793:0,67,255:26,0 chr1 203274811 . C . PASS END=203274816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203274817 . G . PASS END=203274849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 203274850 . G . PASS END=203274872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 203274873 . A . PASS END=203274876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 203276232 . A . PASS END=203276232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1140:0,93,255:31,0 chr1 203276233 . G . PASS END=203276233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr1 203276234 . C . PASS END=203276330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1194:0,84,255:40,0 chr1 203276331 . T . PASS END=203276331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:34,0 chr1 203276332 . G . PASS END=203276357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1263:0,89,255:34,0 chr1 203276358 . C . PASS END=203276401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,917:0,64,255:26,0 chr1 203276402 . G . PASS END=203276402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:20,0 chr1 203276403 . A . PASS END=203276403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 203276404 . C . PASS END=203276405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:26:0,54,810:0,78,255:19,0 chr1 203276406 . C . PASS END=203276415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:21,0 chr1 203276416 . G . PASS END=203276416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 203276417 . T . PASS END=203276424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 203276425 . C . PASS END=203276426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 203276427 . T . PASS END=203276427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 203276428 . T . PASS END=203276428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 203276429 . G . PASS END=203276431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 203276432 . G . PASS END=203276438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 203276439 . G . PASS END=203276439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,676:0,33,255:18,0 chr1 203276440 . C . PASS END=203276467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,662:0,46,255:19,0 chr1 203276468 . C . PASS END=203276471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 203276472 . T . PASS END=203276472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 203276473 . G . PASS END=203276479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,725:0,63,255:22,0 chr1 203276480 . T . PASS END=203276480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 203276481 . C . PASS END=203276482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 203276483 . T . PASS END=203276484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 203276485 . T . PASS END=203276494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 203276495 . A . PASS END=203276495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr1 203276496 . C . PASS END=203276498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 203276499 . G . PASS END=203276499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 203276500 . C . PASS END=203276515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,756:0,66,255:23,0 chr1 203276516 . C . PASS END=203276516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 203276517 . T . PASS END=203276518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 203276519 . G . PASS END=203276519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 203276520 . G . PASS END=203276526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 203276527 . C . PASS END=203276527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 203276528 . A . PASS END=203276528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 203276529 . G . PASS END=203276529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 203276530 . C . PASS END=203276530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 203276531 . C . PASS END=203276553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:18:0,41,630:0,41,255:19,0 chr1 203276554 . A . PASS END=203276554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 203276555 . G . PASS END=203276556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 203276557 . C . PASS END=203276566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:14:0,30,450:0,35,255:13,0 chr1 203311471 . T . PASS END=203311481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 203311482 . T . PASS END=203311492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 203311493 . A . PASS END=203311584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,382:0,30,255:12,0 chr1 203311585 . G . PASS END=203311622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,243:0,24,243:9,0 chr1 203316420 . C . PASS END=203316442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:38:0,81,1307:0,81,255:40,0 chr1 203316443 . T . PASS END=203316443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:67:46:0,67,1579:0,67,255:40,0 chr1 203316444 . A . PASS END=203316449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:91:45:0,91,1562:0,91,255:40,0 chr1 203316450 . T . PASS END=203316450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:39:47:0,39,1534:0,39,255:40,0 chr1 203316451 . C . PASS END=203316605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1158:0,83,255:40,0 chr1 203316606 . G . PASS END=203316606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:25,0 chr1 203316607 . G . PASS END=203316610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 203316611 . T . PASS END=203316611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1094:0,65,255:26,0 chr1 203316612 . A . PASS END=203316614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 203316615 . T . PASS END=203316615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 203316616 . A . PASS END=203316618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:29,0 chr1 203316619 . G . PASS END=203316619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr1 203316620 . G . PASS END=203316623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 203316624 . C . PASS END=203316624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:25,0 chr1 203316625 . G . PASS END=203316643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1177:0,80,255:31,0 chr1 203316644 . T . PASS END=203316646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:25,0 chr1 203316647 . A . PASS END=203316652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,86,255:27,0 chr1 203316653 . A . PASS END=203316653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:25,0 chr1 203316654 . G . PASS END=203316656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1080:0,83,255:30,0 chr1 203316657 . G . PASS END=203316657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 203316658 . C . PASS END=203316665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1152:0,99,255:33,0 chr1 203316666 . C . PASS END=203316666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr1 203316667 . T . PASS END=203316676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr1 203316677 . C . PASS END=203316677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 203316678 . C . PASS END=203316691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 203316692 . C . PASS END=203316692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 203316693 . G . PASS END=203316695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 203316696 . G . PASS END=203316696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 203316697 . G . PASS END=203316698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 203316699 . G . PASS END=203316699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:29,0 chr1 203316700 . G . PASS END=203316709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:31,0 chr1 203316710 . A . PASS END=203316710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:30,0 chr1 203316711 . G . PASS END=203316736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1103:0,82,255:35,0 chr1 203316737 . C . PASS END=203316737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:33,0 chr1 203316738 . C . PASS END=203316738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 203316739 . C . PASS END=203316739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:32,0 chr1 203316740 . C . PASS END=203316990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1215:0,80,255:40,0 chr1 203316991 . G . PASS END=203316992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,90,255:23,0 chr1 203316993 . G . PASS END=203317001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,81,255:34,0 chr1 203317002 . A . PASS END=203317002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr1 203317003 . G . PASS END=203317124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1065:0,82,255:39,0 chr1 203317125 . A . PASS END=203317158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:37:0,98,1374:0,98,255:40,0 chr1 203317159 . G . PASS END=203317159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr1 203317160 . C . PASS END=203317161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:33,0 chr1 203317162 . C T, 48.00 PASS DP=39;MQ=250.00;MQRankSum=5.239;ReadPosRankSum=2.812;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,16,0:0.410,0.000:39:14,5,0:9,11,0:46:83,0,47,183,183,183:255,0,255:19,0:4.8003e+01,1.1235e-04,5.0000e+01,1.8277e+02,2.1754e+02,1.8578e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,13,7,9:13,10,10,6 chr1 203317163 . T . PASS END=203317199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1172:0,83,255:32,0 chr1 203317200 . A . PASS END=203317359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1163:0,80,255:40,0 chr1 203317360 . G . PASS END=203317360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1336:0,60,255:37,0 chr1 203317361 . A . PASS END=203317362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:40,0 chr1 203317363 . G . PASS END=203317363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:23:45:0,23,1139:0,23,255:35,0 chr1 203317364 . A . PASS END=203317364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 203317365 . G . PASS END=203317365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1167:0,62,255:34,0 chr1 203317366 . C . PASS END=203317398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1278:0,89,255:38,0 chr1 203452313 . A . PASS END=203452313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 203452314 . T . PASS END=203452317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:16,0 chr1 203452318 . G . PASS END=203452321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr1 203452322 . C . PASS END=203452324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:17,0 chr1 203452325 . C . PASS END=203452326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 203452327 . C . PASS END=203452342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,605:0,40,255:19,0 chr1 203452343 . C . PASS END=203452343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 203452344 . T . PASS END=203452344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 203452345 . T . PASS END=203452345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,604:0,10,255:17,0 chr1 203452346 . C . PASS END=203452349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,639:0,57,255:19,0 chr1 203452350 . T . PASS END=203452350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,558:0,24,255:17,0 chr1 203452351 . C . PASS END=203452354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,638:0,57,255:19,0 chr1 203452355 . G . PASS END=203452355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:16,0 chr1 203452356 . C . PASS END=203452366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 203452367 . C . PASS END=203452367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,568:0,30,255:17,0 chr1 203452368 . A . PASS END=203452368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,590:0,18,255:18,0 chr1 203452369 . A . PASS END=203452379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,592:0,40,255:19,0 chr1 203452380 . C . PASS END=203452380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:17,0 chr1 203452381 . A . PASS END=203452382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 203452383 . G . PASS END=203452383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:17,0 chr1 203452384 . A . PASS END=203452385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:18,0 chr1 203452386 . G . PASS END=203452386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,523:0,15,255:17,0 chr1 203452387 . A . PASS END=203452388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 203452389 . C . PASS END=203452389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 203452390 . A . PASS END=203452390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 203452391 . A . PASS END=203452391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,560:0,23,255:14,0 chr1 203452392 . G . PASS END=203452392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 203452393 . A . PASS END=203452395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 203452396 . C . PASS END=203452396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:14,0 chr1 203452397 . G . PASS END=203452400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:15,0 chr1 203452401 . C . PASS END=203452401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,488:0,7,255:12,0 chr1 203452402 . T . PASS END=203452407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 203452408 . C . PASS END=203452408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:13,0 chr1 203452409 . G . PASS END=203452411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 203452412 . C . PASS END=203452412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr1 203452413 . G . PASS END=203452414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 203452415 . A . PASS END=203452416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:14,0 chr1 203452417 . A . PASS END=203452417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 203452418 . C . PASS END=203452418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 203452419 . C . PASS END=203452419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 203452420 . C . PASS END=203452420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr1 203452421 . A . PASS END=203452421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,366:0,1,255:13,0 chr1 203452422 . G . PASS END=203452422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 203452423 . G . PASS END=203452423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:17,0 chr1 203452424 . C . PASS END=203452426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,556:0,54,255:18,0 chr1 203452427 . A . PASS END=203452427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,509:0,37,255:17,0 chr1 203452428 . G . PASS END=203452483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,599:0,40,255:19,0 chr1 203452484 . C . PASS END=203452484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 203452485 . T . PASS END=203452487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr1 203452488 . C . PASS END=203452488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:15,0 chr1 203452489 . T . PASS END=203452500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 203452501 . T . PASS END=203452501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 203452502 . C . PASS END=203452534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 203452535 . C . PASS END=203452539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 203452540 . A . PASS END=203452540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 203452541 . T . PASS END=203452541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 203452542 . G . PASS END=203452542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 203452543 . C . PASS END=203452549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 203452550 . C . PASS END=203452550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 203452551 . C . PASS END=203452558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 203452559 . T . PASS END=203452559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 203452560 . T . PASS END=203452572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:17,0 chr1 203452573 . C . PASS END=203452576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 203452577 . T . PASS END=203452577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 203452578 . G . PASS END=203452583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 203452584 . G . PASS END=203452586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 203452587 . G . PASS END=203452587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 203452588 . C . PASS END=203452607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 203452608 . T . PASS END=203452617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 203452618 . C . PASS END=203452625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 203452626 . A . PASS END=203452628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 203452629 . A . PASS END=203452630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203452631 . C . PASS END=203452631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 203452632 . T . PASS END=203452634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203452635 . A . PASS END=203452636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 203452637 . C . PASS END=203452639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203452640 . C . PASS END=203452647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,933:0,67,255:26,0 chr1 203452648 . C . PASS END=203452648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 203452649 . T . PASS END=203452649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 203452650 . T . PASS END=203452657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1019:0,87,255:30,0 chr1 203452658 . G . PASS END=203452658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 203452659 . A . PASS END=203452730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1121:0,80,255:35,0 chr1 203452731 . A . PASS END=203452731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:32,0 chr1 203452732 . G . PASS END=203452732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 203452733 . A . PASS END=203452733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1062:0,66,255:31,0 chr1 203452734 . T . PASS END=203452778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1057:0,83,255:32,0 chr1 203452779 . A . PASS END=203452779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:26,0 chr1 203452780 . C . PASS END=203452811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1048:0,83,255:32,0 chr1 203452812 . C . PASS END=203452812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 203452813 . G . PASS END=203452830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1119:0,87,255:31,0 chr1 203452831 . G . PASS END=203452861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,939:0,68,255:26,0 chr1 203452862 . T . PASS END=203452862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203452863 . C . PASS END=203452881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 203452882 . C . PASS END=203452887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 203452888 . C . PASS END=203452905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,1002:0,70,255:26,0 chr1 203452906 . G . PASS END=203453253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,1080:0,83,255:40,0 chr1 203453254 . A . PASS END=203453269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:61:26:0,61,870:0,61,255:26,0 chr1 203453270 . A . PASS END=203453284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:19:0,40,599:0,40,255:19,0 chr1 203453285 . A . PASS END=203453285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:16,0 chr1 203455834 . A . PASS END=203455834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203455835 . A . PASS END=203455835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 203455836 . A . PASS END=203455838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203455839 . A . PASS END=203455839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 203455840 . A . PASS END=203455844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203455845 . A . PASS END=203455850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,984:0,68,255:26,0 chr1 203455851 . A . PASS END=203456007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:28:0,81,1041:0,84,255:40,0 chr1 203456008 . A . PASS END=203456009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:37:0,69,1035:0,111,255:25,0 chr1 203465134 . A . PASS END=203465162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:25,0 chr1 203465163 . G . PASS END=203465175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:30,0 chr1 203465176 . C . PASS END=203465176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 203465177 . A . PASS END=203465257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1247:0,89,255:35,0 chr1 203465258 . A . PASS END=203465258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 203465259 . A . PASS END=203465308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:33:0,93,1343:0,97,255:37,0 chr1 203465309 . T . PASS END=203465309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:30,0 chr1 203465310 . C . PASS END=203465328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,92,255:34,0 chr1 203465329 . G . PASS END=203465354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:26,0 chr1 203465355 . A . PASS END=203465360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 203465361 . C . PASS END=203465364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:19,0 chr1 203466105 . G . PASS END=203466223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1127:0,88,255:40,0 chr1 203466224 . G . PASS END=203466236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:73:30:0,73,1033:0,73,255:27,0 chr1 203466237 . A . PASS END=203466237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:23,0 chr1 203466238 . A . PASS END=203466243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:24,0 chr1 203467809 . G . PASS END=203467961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1094:0,87,255:40,0 chr1 203467962 . G . PASS END=203467962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 203467963 . G . PASS END=203467967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 203468777 . C . PASS END=203468780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203468781 . G . PASS END=203468783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 203468784 . G . PASS END=203468787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203468788 . A . PASS END=203468788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 203468789 . G . PASS END=203468790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203468791 . A . PASS END=203468791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 203468792 . T . PASS END=203468814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,979:0,87,255:32,0 chr1 203468815 . T . PASS END=203468815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 203468816 . C . PASS END=203468915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:32:0,93,1156:0,93,255:40,0 chr1 203468916 . T . PASS END=203468916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1288:0,67,255:34,0 chr1 203468917 . G . PASS END=203468978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1208:0,83,255:38,0 chr1 203468979 . G . PASS END=203468979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:28,0 chr1 203472042 . G . PASS END=203472051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,697:0,47,255:19,0 chr1 203472052 . A . PASS END=203472078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:22,0 chr1 203472079 . A . PASS END=203472134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 203472135 . C . PASS END=203472136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 203472137 . G . PASS END=203472137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 203472678 . A . PASS END=203472685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:24,0 chr1 203472686 . G . PASS END=203472692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 203472693 . A . PASS END=203472693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:27,0 chr1 203472694 . C . PASS END=203472774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:32,0 chr1 203472775 . A . PASS END=203472775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 203472776 . C . PASS END=203472776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 203472777 . C . PASS END=203472777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 203472778 . C . PASS END=203472789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1132:0,93,255:31,0 chr1 203472790 . G . PASS END=203472791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 203472792 . C . PASS END=203472794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 203472795 . T . PASS END=203472816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 203472817 . T . PASS END=203472825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,69,255:19,0 chr1 203472826 . T . PASS END=203472848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 203652334 . A . PASS END=203652406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:34:0,96,1440:0,102,255:40,0 chr1 203652407 . C . PASS END=203652443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,121,255:40,0 chr1 203652444 . A G, 49.86 PASS DP=51;MQ=250.00;MQRankSum=6.105;ReadPosRankSum=2.651;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,24,0:0.471,0.000:51:13,12,0:14,12,0:47:85,0,47,185,185,185:255,0,255:26,0:4.9865e+01,8.8272e-05,5.0000e+01,1.8463e+02,2.1940e+02,1.8765e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,18,12,12:13,14,12,12 chr1 203652445 . A . PASS END=203652481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,114,1710:0,137,255:40,0 chr1 203652482 . G . PASS END=203652492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1305:0,101,255:36,0 chr1 203652493 . C . PASS END=203652517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,892:0,62,255:25,0 chr1 203652518 . C . PASS END=203652526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:19,0 chr1 203667285 . G . PASS END=203667285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 203667286 . T . PASS END=203667286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:29,0 chr1 203667287 . C . PASS END=203667300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1119:0,80,255:37,0 chr1 203667301 . T . PASS END=203667301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:35,0 chr1 203667302 . G . PASS END=203667371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:37:0,96,1311:0,96,255:40,2 chr1 203667372 . T . PASS END=203667408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,124,255:40,0 chr1 203667409 . T C, 50.00 PASS DP=48;MQ=247.55;MQRankSum=5.448;ReadPosRankSum=0.165;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,25,0:0.521,0.000:48:10,10,0:13,15,0:48:85,0,50,892,749,1641:255,0,255:21,0:5.0000e+01,6.6269e-05,5.2789e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,10,15:14,9,13,12 chr1 203667410 . A . PASS END=203667446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,111,1665:0,119,255:40,0 chr1 203667447 . T . PASS END=203667482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1247:0,86,255:37,0 chr1 203668588 . T . PASS END=203668794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,82,255:40,2 chr1 203668795 . A . PASS END=203668845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,967:0,65,255:26,0 chr1 203669334 . G . PASS END=203669459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,89,255:40,0 chr1 203669926 . G . PASS END=203669926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:31,0 chr1 203669927 . G . PASS END=203670015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1188:0,81,255:40,0 chr1 203670016 . T . PASS END=203670016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:30,0 chr1 203670017 . C . PASS END=203670017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1350:0,92,255:30,0 chr1 203670018 . A . PASS END=203670019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1154:0,69,255:30,0 chr1 203670020 . T . PASS END=203670021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 203670022 . A . PASS END=203670022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:28,0 chr1 203670023 . G . PASS END=203670035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 203670036 . G . PASS END=203670051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,931:0,64,255:26,0 chr1 203671172 . G . PASS END=203671207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,176,255:40,0 chr1 203672780 . C . PASS END=203672782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,101,1457:0,101,255:38,0 chr1 203672783 . A . PASS END=203672783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1256:0,62,255:36,0 chr1 203672784 . G . PASS END=203672939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:29:0,80,1049:0,80,255:40,0 chr1 203672940 . C . PASS END=203672941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 203676137 . G . PASS END=203676306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:32:0,90,1350:0,96,255:40,0 chr1 203676307 . G . PASS END=203676332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:25:0,63,945:0,75,255:26,0 chr1 203676333 . A . PASS END=203676343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,66,255:17,0 chr1 203676344 . C . PASS END=203676351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,540:0,34,255:12,0 chr1 203676990 . A . PASS END=203676990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 203676991 . A . PASS END=203676991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 203676992 . A . PASS END=203676992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:26,0 chr1 203676993 . A . PASS END=203676993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 203676994 . T . PASS END=203676994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:26,0 chr1 203676995 . G . PASS END=203677001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203677002 . G . PASS END=203677002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 203677003 . A . PASS END=203677007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1117:0,80,255:32,0 chr1 203677008 . A . PASS END=203677008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 203677009 . A . PASS END=203677232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,3:66:80:39:0,80,1346:0,80,255:40,0 chr1 203678429 . C . PASS END=203678436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 203678437 . G . PASS END=203678437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 203678438 . A . PASS END=203678438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,586:0,43,255:19,0 chr1 203678439 . A . PASS END=203678466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,737:0,60,255:26,0 chr1 203678467 . C . PASS END=203678649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1215:0,87,255:40,0 chr1 203678650 . C . PASS END=203678651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 203678652 . C . PASS END=203678654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203678655 . A . PASS END=203678661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 203678662 . C . PASS END=203678665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:29,0 chr1 203678666 . C . PASS END=203678666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 203678667 . G . PASS END=203678670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 203680005 . G . PASS END=203680007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 203680008 . T . PASS END=203680008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 203680009 . A . PASS END=203680014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 203680015 . A . PASS END=203680015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 203680016 . T . PASS END=203680019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1148:0,93,255:31,0 chr1 203680020 . G . PASS END=203680020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 203680021 . G . PASS END=203680054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1219:0,91,255:36,0 chr1 203680055 . A . PASS END=203680055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr1 203680056 . A . PASS END=203680165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:31:0,86,1218:0,86,255:40,0 chr1 203680166 . A . PASS END=203680166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 203680167 . T . PASS END=203680168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 203680169 . A . PASS END=203680169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 203680170 . G . PASS END=203680193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:31,0 chr1 203680194 . C . PASS END=203680194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 203680195 . T . PASS END=203680195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:24,0 chr1 203680196 . G . PASS END=203680200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1031:0,74,255:25,0 chr1 203680201 . G . PASS END=203680201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:24,0 chr1 203680202 . C . PASS END=203680207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 203680208 . T . PASS END=203680236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,46,255:19,0 chr1 203681088 . G . PASS END=203681113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1057:0,87,255:32,0 chr1 203681114 . A . PASS END=203681114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,870:0,79,255:31,0 chr1 203681115 . C . PASS END=203681266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1186:0,83,255:40,0 chr1 203681267 . G . PASS END=203681267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr1 203682293 . G . PASS END=203682380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1109:0,80,255:40,0 chr1 203683299 . G . PASS END=203683405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:37:0,84,1195:0,84,255:40,0 chr1 203689677 . G . PASS END=203689865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:33:0,90,1274:0,93,255:40,0 chr1 203689866 . C . PASS END=203689866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:26,0 chr1 203689867 . A . PASS END=203689868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:28,0 chr1 203690320 . G . PASS END=203690320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 203690325 . G . PASS END=203690326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 203690327 . T . PASS END=203690327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 203690328 . T . PASS END=203690329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 203690330 . C . PASS END=203690330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 203690331 . C . PASS END=203690337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:24,0 chr1 203690338 . A . PASS END=203690339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 203690340 . G . PASS END=203690343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:28,0 chr1 203690344 . T . PASS END=203690351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 203690352 . T . PASS END=203690352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 203690353 . T . PASS END=203690376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:31:0,91,1149:0,91,255:36,0 chr1 203690377 . C . PASS END=203690377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:31,0 chr1 203690378 . T . PASS END=203690390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1203:0,83,255:33,0 chr1 203690391 . G . PASS END=203690391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:32,0 chr1 203690392 . C . PASS END=203690428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1177:0,80,255:33,0 chr1 203690429 . G . PASS END=203690429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:33,0 chr1 203690430 . C . PASS END=203690438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1235:0,88,255:35,0 chr1 203690439 . T . PASS END=203690440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:32,0 chr1 203690441 . T . PASS END=203690462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1241:0,86,255:35,0 chr1 203690463 . T . PASS END=203690463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 203690464 . C . PASS END=203690492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,82,255:33,0 chr1 203690493 . C . PASS END=203690493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 203690494 . A . PASS END=203690494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203690495 . T . PASS END=203690508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,939:0,67,255:24,0 chr1 203690509 . T . PASS END=203690509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 203690510 . C . PASS END=203690520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 203690521 . T . PASS END=203690538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,751:0,47,255:19,0 chr1 203691606 . G . PASS END=203691802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:33:0,82,1031:0,82,255:40,0 chr1 203691803 . A . PASS END=203691803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:26,0 chr1 203691804 . C . PASS END=203691806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 203691807 . T . PASS END=203691817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,77,255:26,0 chr1 203693009 . A . PASS END=203693037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1118:0,83,255:35,0 chr1 203693038 . C . PASS END=203693038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:33,0 chr1 203693039 . T . PASS END=203693116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:35:0,95,1304:0,95,255:40,0 chr1 203696523 . T . PASS END=203696529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:18,0 chr1 203696530 . C . PASS END=203696583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,798:0,61,255:26,0 chr1 203696584 . C . PASS END=203696586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203696587 . A . PASS END=203696603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,951:0,65,255:26,0 chr1 203696604 . G . PASS END=203696608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,984:0,81,255:28,0 chr1 203696609 . C . PASS END=203696609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 203696610 . G . PASS END=203696610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr1 203696611 . A . PASS END=203696611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 203696612 . G . PASS END=203696612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203696613 . G . PASS END=203696622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr1 203696623 . A . PASS END=203696623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,878:0,29,255:23,0 chr1 203696624 . G . PASS END=203696647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,961:0,65,255:26,0 chr1 203696648 . G . PASS END=203696648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 203696649 . C . PASS END=203696667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 203696668 . G . PASS END=203696676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 203696677 . G . PASS END=203696677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:16,0 chr1 203696678 . C . PASS END=203696699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,621:0,43,255:18,0 chr1 203697279 . C . PASS END=203697286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 203697287 . G . PASS END=203697287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 203697288 . C . PASS END=203697296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,537:0,45,255:19,0 chr1 203697297 . G . PASS END=203697319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:21,0 chr1 203697320 . A . PASS END=203697320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 203697321 . G . PASS END=203697330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,724:0,66,255:22,0 chr1 203697331 . C . PASS END=203697331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 203697332 . T . PASS END=203697337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 203697338 . C . PASS END=203697362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 203702351 . A . PASS END=203702353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 203702354 . G . PASS END=203702354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203702355 . A . PASS END=203702355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:26,0 chr1 203702356 . C . PASS END=203702529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:29:0,81,1215:0,87,255:40,0 chr1 203702530 . T . PASS END=203702530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:29,0 chr1 203702531 . G . PASS END=203702534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:29,0 chr1 203702535 . G . PASS END=203702535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 203702536 . A . PASS END=203702536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 203708674 . A . PASS END=203708871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1208:0,81,255:40,0 chr1 203708872 . G . PASS END=203708875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:27,0 chr1 203708876 . G . PASS END=203708880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 203708881 . G . PASS END=203708881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 203708882 . T . PASS END=203708883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 203708884 . A . PASS END=203708902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,937:0,65,255:26,0 chr1 203708903 . A . PASS END=203708903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,759:0,28,255:22,0 chr1 203708904 . C . PASS END=203708934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,884:0,72,255:25,0 chr1 203708935 . C . PASS END=203708935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 203708936 . T . PASS END=203708946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 203708947 . G . PASS END=203708952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,55,255:17,0 chr1 203708953 . T . PASS END=203708953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:14,0 chr1 203708954 . C . PASS END=203708958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,56,255:16,0 chr1 203708959 . C . PASS END=203708961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:22:0,36,540:0,66,255:12,0 chr1 203708962 . A . PASS END=203708962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:12,0 chr1 203708963 . G . PASS END=203708980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:12:0,34,301:0,34,255:13,0 chr1 203708981 . G . PASS END=203708981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr1 203708982 . A . PASS END=203708982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 203734471 . A . PASS END=203734511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,105,1575:0,114,255:40,0 chr1 203734694 . A . PASS END=203734782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:37:0,102,1467:0,111,255:40,0 chr1 203739956 . A . PASS END=203739968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1390:0,103,255:39,0 chr1 203739969 . A . PASS END=203739969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:37,0 chr1 203739970 . T . PASS END=203740062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:41:0,87,1314:0,87,255:40,0 chr1 203740063 . A . PASS END=203740065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,88,255:26,0 chr1 203740495 . G . PASS END=203740577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:36:0,101,1362:0,101,255:40,0 chr1 203740578 . A . PASS END=203740605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:37:0,96,1418:0,101,255:39,0 chr1 203741196 . G . PASS END=203741196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 203741197 . G . PASS END=203741198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 203741199 . G . PASS END=203741199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 203741200 . A . PASS END=203741200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 203741201 . C . PASS END=203741201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 203741202 . A . PASS END=203741202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 203741203 . T . PASS END=203741204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:29,0 chr1 203741205 . A . PASS END=203741205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 203741206 . G . PASS END=203741275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1310:0,92,255:40,0 chr1 203743003 . C . PASS END=203743014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,653:0,41,255:19,0 chr1 203743015 . G . PASS END=203743031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:23,0 chr1 203743032 . G . PASS END=203743032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 203743033 . C . PASS END=203743038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 203743039 . G . PASS END=203743045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 203743046 . T . PASS END=203743081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,886:0,64,255:26,0 chr1 203743082 . A . PASS END=203743082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 203743083 . C . PASS END=203743084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 203743085 . C . PASS END=203743087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:26,0 chr1 203743088 . T . PASS END=203743089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 203743090 . G . PASS END=203743091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 203743092 . C . PASS END=203743098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 203743099 . A . PASS END=203743100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 203743101 . G . PASS END=203743108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 203743109 . A . PASS END=203743109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:24,0 chr1 203743110 . C . PASS END=203743121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1194:0,83,255:28,0 chr1 203743122 . G A, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=3.390;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,17,0:0.567,0.000:30:9,11,0:4,6,0:48:85,0,49,592,465,1057:255,0,255:12,0:5.0000e+01,7.1964e-05,5.1840e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,4,11,6:9,4,13,4 chr1 203743123 . G . PASS END=203743159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1218:0,93,255:38,0 chr1 203743160 . C . PASS END=203743287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:35:0,89,1277:0,89,255:40,0 chr1 203743288 . G . PASS END=203743288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:32,0 chr1 203743289 . A . PASS END=203743615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:35:0,82,1296:0,82,255:40,0 chr1 203743616 . T . PASS END=203743652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,101,1390:0,101,255:40,0 chr1 203743653 . C T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.189;ReadPosRankSum=3.474;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,22,0:0.579,0.000:38:9,16,0:7,6,0:47:85,0,48,784,572,1356:255,0,255:16,0:5.0000e+01,7.8435e-05,5.0934e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,9,13:8,8,9,13 chr1 203743654 . T . PASS END=203743681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:37:0,90,1274:0,94,255:39,0 chr1 203743682 . G . PASS END=203743683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:35,0 chr1 203743684 . C . PASS END=203743690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:35,0 chr1 203743691 . A . PASS END=203743705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,88,255:32,0 chr1 203743706 . T . PASS END=203743706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 203743707 . G . PASS END=203743790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1153:0,80,255:38,0 chr1 203743791 . G . PASS END=203743791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:29,0 chr1 203743792 . C . PASS END=203743808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 203743809 . A . PASS END=203743809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 203766651 . A . PASS END=203766789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:87:31:0,87,1305:0,93,255:40,0 chr1 203766790 . T . PASS END=203766826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1782:0,120,255:40,0 chr1 203766827 . T C, 49.09 PASS DP=52;MQ=250.00;MQRankSum=6.086;ReadPosRankSum=1.259;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,23,0:0.451,0.000:51:9,8,0:19,15,0:48:84,0,50,794,993,1787:255,0,255:26,0:4.9089e+01,7.5329e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,13,11,12:14,14,16,7 chr1 203766828 . G . PASS END=203766850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,143,255:40,0 chr1 203766851 . T . PASS END=203766851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:75:53:0,75,1336:0,75,255:40,0 chr1 203766852 . T . PASS END=203766864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr1 203766865 . G . PASS END=203767616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1148:0,80,255:40,1 chr1 203767617 . A . PASS END=203767617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 203767618 . A . PASS END=203767620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 203767621 . A . PASS END=203767621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 203767622 . C . PASS END=203767628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 203767629 . G . PASS END=203767666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,990:0,65,255:26,0 chr1 203767667 . A . PASS END=203767672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 203767673 . T . PASS END=203767673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,895:0,48,255:28,0 chr1 203767674 . C . PASS END=203767676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 203767677 . T . PASS END=203767678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,997:0,76,255:26,0 chr1 203767679 . G . PASS END=203767708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1210:0,81,255:35,0 chr1 203767709 . A . PASS END=203767709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:34,0 chr1 203767710 . G . PASS END=203767720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1282:0,105,255:35,0 chr1 203767721 . T . PASS END=203767721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:35,0 chr1 203767722 . T . PASS END=203767728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1297:0,108,255:36,0 chr1 203767729 . C . PASS END=203767729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:33,0 chr1 203767730 . T . PASS END=203767814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1255:0,89,255:37,0 chr1 203767815 . G . PASS END=203767899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,818:0,62,255:26,0 chr1 203767900 . T . PASS END=203767900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr1 203767901 . G . PASS END=203767913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 203767914 . A . PASS END=203767920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 203767921 . C . PASS END=203767921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 203767922 . T . PASS END=203767959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1072:0,87,255:34,0 chr1 203767960 . T . PASS END=203767960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr1 203767961 . G . PASS END=203767963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 203767964 . G . PASS END=203767964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:33,0 chr1 203767965 . A . PASS END=203768757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:36:0,80,1259:0,80,255:40,1 chr1 203768758 . G . PASS END=203768758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:33,0 chr1 203768759 . C . PASS END=203768760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1340:0,81,255:37,0 chr1 203768761 . T . PASS END=203768761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1237:0,67,255:35,0 chr1 203768762 . G . PASS END=203769590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1312:0,81,255:40,0 chr1 203771222 . A . PASS END=203771223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 203771224 . G . PASS END=203771241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,992:0,81,255:36,0 chr1 203771242 . C . PASS END=203771242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 203771243 . C . PASS END=203771289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1274:0,91,255:37,0 chr1 203771290 . T . PASS END=203771290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1199:0,77,255:32,0 chr1 203771291 . T . PASS END=203771317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1249:0,89,255:34,0 chr1 203771318 . T . PASS END=203771318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:28,0 chr1 203771319 . G . PASS END=203771320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 203786199 . A . PASS END=203786252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:76:0,120,1800:0,180,255:40,1 chr1 203787698 . G . PASS END=203787698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 203787699 . G . PASS END=203787699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 203787700 . T C, 139.83 PASS DP=31;MQ=223.61;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,18,0:0,13,0:90:178,93,0,1157,93,1157:255,96,0:0,0:1.3983e+02,8.9835e+01,0.0000e+00,4.5000e+02,1.2460e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,10:0,0,18,13 chr1 203787701 . G . PASS END=203787705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1105:0,93,255:32,0 chr1 203787706 . C . PASS END=203787706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 203787707 . T . PASS END=203787737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:32:0,91,1186:0,91,255:36,0 chr1 203787738 . G . PASS END=203787749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1296:0,94,255:36,0 chr1 203787750 . T . PASS END=203787750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1114:0,77,255:33,0 chr1 203787751 . T . PASS END=203787760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1341:0,95,255:36,0 chr1 203787761 . T . PASS END=203787761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:33,0 chr1 203787762 . G . PASS END=203787773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1151:0,91,255:36,0 chr1 203787774 . G . PASS END=203787774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr1 203787775 . C . PASS END=203787784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:32,0 chr1 203787785 . C . PASS END=203787786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:66:33:0,66,1041:0,66,255:25,0 chr1 203787787 . G . PASS END=203787790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 203787791 . T . PASS END=203787791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 203787792 . G . PASS END=203787796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 203787797 . T . PASS END=203787797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:26,0 chr1 203787798 . T . PASS END=203787802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 203787803 . C . PASS END=203787817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:23,0 chr1 203797427 . A . PASS END=203797550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,117,1755:0,132,255:40,0 chr1 203798579 . C . PASS END=203798580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 203798581 . G . PASS END=203798599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1132:0,96,255:37,0 chr1 203798600 . A . PASS END=203798600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:36,0 chr1 203798601 . G . PASS END=203798782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:37:0,96,1374:0,96,255:40,0 chr1 203798908 . A . PASS END=203799024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,138,255:40,0 chr1 203799251 . G . PASS END=203799331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:82:0,120,1800:0,209,255:40,0 chr1 203800789 . A . PASS END=203800899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:35:0,99,1274:0,99,255:40,0 chr1 203802919 . G . PASS END=203802978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:79:0,120,1800:0,221,255:40,0 chr1 203802979 . C . PASS END=203802981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:95:0,120,1800:0,255,255:40,0 chr1 203803065 . A . PASS END=203803096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:65:0,120,1800:0,196,255:40,0 chr1 203807094 . G . PASS END=203807192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:38:0,86,1283:0,86,255:40,0 chr1 203809434 . C . PASS END=203809502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,108,1620:0,137,255:40,0 chr1 203816312 . A . PASS END=203816315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr1 203816316 . A . PASS END=203816316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:19,0 chr1 203816317 . G . PASS END=203816317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 203816318 . T . PASS END=203816318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:19,0 chr1 203816319 . T . PASS END=203816322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:21,0 chr1 203816323 . A . PASS END=203816323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 203816324 . A . PASS END=203816326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr1 203816327 . T . PASS END=203816327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 203816328 . T . PASS END=203816328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:19,0 chr1 203816329 . G . PASS END=203816337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 203816338 . C . PASS END=203816341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 203816342 . T . PASS END=203816346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 203816347 . A . PASS END=203816349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 203816350 . T . PASS END=203816351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 203816352 . A . PASS END=203816354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 203816355 . A . PASS END=203816355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 203816356 . G . PASS END=203816370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1089:0,90,255:31,0 chr1 203816371 . A . PASS END=203816371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 203816372 . G . PASS END=203816388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:31:0,80,1147:0,80,255:38,0 chr1 203816389 . G . PASS END=203816389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:37,0 chr1 203816390 . G . PASS END=203816683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:37:0,82,985:0,82,255:40,2 chr1 203816684 . A . PASS END=203816684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1327:0,73,255:35,0 chr1 203816685 . G . PASS END=203816718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1172:0,85,255:37,0 chr1 203816719 . A . PASS END=203816719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:28,0 chr1 203816720 . G . PASS END=203816743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1064:0,87,255:31,0 chr1 203816744 . G . PASS END=203816744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 203816745 . C . PASS END=203816754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 203816755 . C . PASS END=203816777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,934:0,70,255:25,0 chr1 203816778 . A . PASS END=203816797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,798:0,50,255:19,0 chr1 203816798 . G . PASS END=203816798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 203816799 . A . PASS END=203816815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,674:0,54,255:18,0 chr1 203817459 . G . PASS END=203817535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:57:0,120,1800:0,159,255:40,0 chr1 203818839 . G . PASS END=203818839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 203818840 . C . PASS END=203818935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:30:0,90,1111:0,90,255:40,0 chr1 203818936 . A . PASS END=203818972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,114,1710:0,121,255:40,0 chr1 203818973 . C A, 49.25 PASS DP=49;MQ=120.60;MQRankSum=-0.050;ReadPosRankSum=2.750;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:11,10,0:13,15,0:47:84,0,49,865,855,1720:255,0,255:22,0:4.9250e+01,8.1283e-05,5.1625e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,15,19,6:12,12,8,17 chr1 203818974 . T . PASS END=203819010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,134,255:40,0 chr1 203819011 . C . PASS END=203819119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:33:0,85,1255:0,85,255:40,0 chr1 203819120 . A . PASS END=203819123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 203819124 . G . PASS END=203819139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:17:0,51,599:0,51,255:17,0 chr1 203819140 . A . PASS END=203819141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 203819142 . A . PASS END=203819142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 203819143 . A . PASS END=203819154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 203819628 . T . PASS END=203819634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,900:0,62,255:26,0 chr1 203819635 . C . PASS END=203819667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1177:0,80,255:37,0 chr1 203819668 . A . PASS END=203819668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:35,0 chr1 203819669 . T . PASS END=203819789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1215:0,84,255:40,0 chr1 203819790 . C . PASS END=203819800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1100:0,74,255:26,0 chr1 203819801 . G . PASS END=203819804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 203819805 . C . PASS END=203819809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1053:0,71,255:24,0 chr1 203820185 . G . PASS END=203820252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,111,1665:0,132,255:40,0 chr1 203821269 . T . PASS END=203821276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 203821277 . T . PASS END=203821277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 203821278 . G . PASS END=203821289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:26,0 chr1 203821290 . G . PASS END=203821313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:38,0 chr1 203821314 . G A, 50.00 PASS DP=39;MQ=123.84;MQRankSum=0.496;ReadPosRankSum=2.138;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,22,0:0.564,0.000:39:12,14,0:5,8,0:48:85,0,49,756,608,1364:255,0,255:17,0:5.0000e+01,7.2740e-05,5.1706e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,4,17,5:12,5,15,7 chr1 203821315 . G . PASS END=203821351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,117,1482:0,119,255:40,0 chr1 203821352 . A . PASS END=203821527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:52:0,111,1665:0,146,255:40,0 chr1 203830788 . A . PASS END=203830841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,120,1800:0,126,255:40,0 chr1 203830856 . A . PASS END=203830871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,159,255:40,0 chr1 203831042 . A . PASS END=203831042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 203831043 . T . PASS END=203831043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 203831044 . G . PASS END=203831044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:19,0 chr1 203831045 . C . PASS END=203831047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 203831048 . G . PASS END=203831049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 203831050 . A . PASS END=203831055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 203831056 . G . PASS END=203831056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 203831057 . C . PASS END=203831059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 203831060 . C . PASS END=203831061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 203831062 . A . PASS END=203831064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 203831065 . G . PASS END=203831065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 203831066 . G . PASS END=203831066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 203831067 . A . PASS END=203831067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 203831068 . G . PASS END=203831072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 203831073 . G . PASS END=203831073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr1 203831074 . A . PASS END=203831076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 203831077 . A . PASS END=203831077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:21,0 chr1 203831078 . C . PASS END=203831083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,703:0,66,255:22,0 chr1 203831310 . C . PASS END=203831350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,227,255:40,0 chr1 203832791 . A . PASS END=203832853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,141,255:40,0 chr1 203834169 . G . PASS END=203834173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1078:0,90,255:31,0 chr1 203834174 . T . PASS END=203834174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 203834175 . G . PASS END=203834176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 203834177 . T . PASS END=203834177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr1 203834178 . G . PASS END=203834247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:31:0,93,1081:0,93,255:40,0 chr1 203839005 . G . PASS END=203839060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,155,255:40,0 chr1 204082044 . A . PASS END=204082046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 204082047 . T . PASS END=204082051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 204082052 . G . PASS END=204082052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 204082053 . A . PASS END=204082069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:15,0 chr1 204082070 . C . PASS END=204082070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 204082071 . C . PASS END=204082071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 204082072 . A . PASS END=204082077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 204082078 . C . PASS END=204082078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 204082079 . C . PASS END=204082092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:17,0 chr1 204082093 . G . PASS END=204082093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:15,0 chr1 204082094 . C . PASS END=204082094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 204082095 . A . PASS END=204082095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 204082096 . C . PASS END=204082099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,635:0,51,255:17,0 chr1 204082100 . G . PASS END=204082100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 204082101 . G . PASS END=204082103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:18,0 chr1 204082104 . A . PASS END=204082104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 204082105 . A . PASS END=204082106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,578:0,54,255:18,0 chr1 204082107 . T . PASS END=204082107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 204082108 . G . PASS END=204082108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 204082109 . C . PASS END=204082109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 204082110 . A . PASS END=204082110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 204082111 . C . PASS END=204082112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 204082113 . A . PASS END=204082115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:18,0 chr1 204082116 . A . PASS END=204082116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:15,0 chr1 204082117 . A . PASS END=204082123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 204082124 . G . PASS END=204082124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 204082125 . G . PASS END=204082140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,584:0,51,255:17,0 chr1 204082141 . G . PASS END=204082153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,34,255:13,0 chr1 204082154 . C . PASS END=204082156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 204082157 . G . PASS END=204082164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 204082165 . C . PASS END=204082165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 204082166 . C . PASS END=204082185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 204082186 . C . PASS END=204082194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 204082195 . C . PASS END=204082195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 204082196 . A . PASS END=204082203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 204082204 . C . PASS END=204082206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 204082207 . C . PASS END=204082207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 204082208 . C . PASS END=204082218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:11,0 chr1 204082219 . C . LowGQ END=204082219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:10,0 chr1 204082220 . T . PASS END=204082227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 204082228 . A . PASS END=204082236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 204082237 . C . PASS END=204082238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 204082239 . C . PASS END=204082262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,260:0,27,255:9,0 chr1 204083449 . G . PASS END=204083458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:26,0 chr1 204083459 . C . PASS END=204083560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1057:0,87,255:38,0 chr1 204083647 . T . PASS END=204083730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:35:0,89,1279:0,89,255:40,0 chr1 204083731 . A . PASS END=204083733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:26,0 chr1 204085635 . G . PASS END=204085646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 204085647 . G . PASS END=204085664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,919:0,78,255:26,0 chr1 204085665 . T . PASS END=204085665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 204085666 . C . PASS END=204085680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,886:0,64,255:26,0 chr1 204085681 . G . PASS END=204085682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 204085683 . T . PASS END=204085689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:24,0 chr1 204085690 . G . PASS END=204085690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:24,0 chr1 204085691 . C . PASS END=204085692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr1 204085693 . G . PASS END=204085707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 204085708 . C . PASS END=204085710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 204085711 . G . PASS END=204085712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 204085713 . T . PASS END=204085724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 204085725 . A . PASS END=204085727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204085728 . C . PASS END=204085729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 204085730 . G . PASS END=204085738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 204085739 . A . PASS END=204085739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 204085740 . A . PASS END=204085740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:25,0 chr1 204085741 . C . PASS END=204085747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 204085748 . G . PASS END=204085748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204085749 . C . PASS END=204085750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,976:0,65,255:26,0 chr1 204085751 . A . PASS END=204085759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,836:0,80,255:27,0 chr1 204085760 . G . PASS END=204085792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,931:0,65,255:26,0 chr1 204085793 . C . PASS END=204085793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 204085794 . A . PASS END=204085796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 204085797 . A . PASS END=204085797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 204085798 . G . PASS END=204085798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 204085799 . C . PASS END=204085799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 204085800 . A . PASS END=204085807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 204086250 . A . PASS END=204086318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,123,255:40,0 chr1 204086721 . C . PASS END=204086722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 204086723 . G . PASS END=204086740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1049:0,83,255:37,0 chr1 204086741 . C . PASS END=204086741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 204086742 . A . PASS END=204086835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1288:0,87,255:40,0 chr1 204090999 . G . PASS END=204091026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 204091027 . G . PASS END=204091061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 204091062 . T . PASS END=204091109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,33,255:13,0 chr1 204091110 . G . PASS END=204091113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 204091365 . G . PASS END=204091369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr1 204091370 . C . PASS END=204091394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:23,0 chr1 204091395 . A . PASS END=204091395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 204091396 . A . PASS END=204091415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,817:0,66,255:24,0 chr1 204091416 . C . PASS END=204091416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 204091417 . C . PASS END=204091435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:24,0 chr1 204091436 . A . PASS END=204091436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:20,0 chr1 204091437 . A . PASS END=204091437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 204091438 . G . PASS END=204091438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 204091439 . C . PASS END=204091442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 204091443 . A . PASS END=204091452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:19,0 chr1 204091453 . G . PASS END=204091465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:13:0,33,495:0,39,255:12,0 chr1 204091466 . C . PASS END=204091466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 204091467 . C . PASS END=204091472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 204091473 . A . PASS END=204091473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:10,0 chr1 204091474 . G . PASS END=204091476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 204091477 . A . LowGQ END=204091477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:5,0,255:11,0 chr1 204091478 . T . PASS END=204091478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 204091479 . G . LowGQ END=204091479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:5,0,255:10,0 chr1 204091480 . G . PASS END=204091481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 204091482 . G . PASS END=204091482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:10,0 chr1 204091483 . G . PASS END=204091487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 204091488 . A . PASS END=204091488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 204091489 . C . PASS END=204091489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204091490 . G . PASS END=204091490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 204091491 . C . PASS END=204091491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204091492 . G . PASS END=204091493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,378:0,20,255:10,0 chr1 204091494 . G . PASS END=204091494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 204091495 . A . PASS END=204091497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 204091498 . T . PASS END=204091499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 204091500 . C . PASS END=204091501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 204091502 . G . PASS END=204091503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 204091504 . C . PASS END=204091505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 204091506 . A . PASS END=204091506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr1 204091507 . G . LowGQ END=204091507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:19,0,255:10,1 chr1 204091508 . C . PASS END=204091508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 204091509 . C . PASS END=204091512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204091513 . C . PASS END=204091525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,360:0,20,255:9,0 chr1 204091526 . G . PASS END=204091527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 204091982 . G . PASS END=204092002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,662:0,57,255:19,0 chr1 204092003 . C . PASS END=204092003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 204092004 . T . PASS END=204092006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 204092007 . C . PASS END=204092013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 204092014 . G . PASS END=204092014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204092015 . C . PASS END=204092016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204092017 . A . PASS END=204092017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 204092018 . T . PASS END=204092018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 204092019 . C . PASS END=204092019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 204092020 . C . PASS END=204092045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 204092046 . C . PASS END=204092051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 204092052 . T . PASS END=204092052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:17,0 chr1 204092053 . G . PASS END=204092074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:18,0 chr1 204092075 . A . PASS END=204092075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 204092076 . C . PASS END=204092091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 204092240 . G . PASS END=204092248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 204092249 . A . PASS END=204092249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 204092250 . G . PASS END=204092253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 204092254 . G . PASS END=204092254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 204092255 . G . PASS END=204092271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,862:0,69,255:24,0 chr1 204092272 . G . PASS END=204092274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr1 204092275 . G . PASS END=204092336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,900:0,72,255:26,0 chr1 204092789 . G . PASS END=204092932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1174:0,83,255:40,0 chr1 204093769 . G . PASS END=204093788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,847:0,69,255:26,0 chr1 204093789 . A . PASS END=204093792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 204093793 . A . PASS END=204093793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,840:0,64,255:26,0 chr1 204093794 . C . PASS END=204093795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 204093796 . A . PASS END=204093796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 204093797 . G . PASS END=204093901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,972:0,81,255:35,0 chr1 204093902 . G . PASS END=204093904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 204093905 . G . PASS END=204093921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 204093922 . T . PASS END=204093940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:24:0,66,990:0,71,255:25,0 chr1 204093941 . G . PASS END=204093941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 204093942 . A . PASS END=204093945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 204093946 . G . PASS END=204093946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 204093947 . G . PASS END=204093951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr1 204093952 . G . PASS END=204093955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 204093956 . T . PASS END=204093957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 204093958 . A . PASS END=204093958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 204093959 . G . PASS END=204093968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 204093969 . C . PASS END=204093985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,54,255:19,0 chr1 204094986 . C . PASS END=204095001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr1 204095002 . G . PASS END=204095003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 204095004 . G . PASS END=204095004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 204095005 . C . PASS END=204095024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,890:0,72,255:26,0 chr1 204095025 . C . PASS END=204095025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204095026 . C . PASS END=204095030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 204095031 . C . PASS END=204095031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:23,0 chr1 204095032 . C . PASS END=204095055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:25,0 chr1 204095056 . G . PASS END=204095056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 204095057 . C . PASS END=204095099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,856:0,65,255:26,0 chr1 204095100 . C . PASS END=204095102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 204095103 . C . PASS END=204095107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 204095108 . C . PASS END=204095124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 204095125 . T . PASS END=204095126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 204095127 . C . PASS END=204095184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1133:0,80,255:39,0 chr1 204095185 . A . PASS END=204095185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:60:37:0,60,985:0,60,255:33,0 chr1 204095186 . T . PASS END=204095233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1305:0,96,255:38,0 chr1 204095234 . A . PASS END=204095234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1098:0,68,255:28,0 chr1 204095235 . T . PASS END=204095235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 204095236 . G . PASS END=204095236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 204095237 . G . PASS END=204095257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr1 204095258 . A . PASS END=204095262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 204101312 . T . PASS END=204101312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 204101313 . C . PASS END=204101323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,884:0,72,255:24,0 chr1 204101324 . C . PASS END=204101332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr1 204101333 . T . PASS END=204101336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 204101337 . G . PASS END=204101341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204101342 . A . PASS END=204101342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 204101343 . G . PASS END=204101373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1078:0,80,255:31,0 chr1 204101374 . T . PASS END=204101374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr1 204101375 . C . PASS END=204101375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 204101376 . A . PASS END=204101384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1061:0,71,255:26,0 chr1 204103643 . C . PASS END=204103652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 204103653 . C . PASS END=204103655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 204103656 . A . PASS END=204103660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:28,0 chr1 204103661 . A . PASS END=204103661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 204103662 . T . PASS END=204103817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1015:0,84,255:40,0 chr1 204103818 . G . PASS END=204103822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:25,0 chr1 204106232 . C . PASS END=204106240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,574:0,40,255:19,0 chr1 204106241 . C . PASS END=204106260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:25,0 chr1 204106261 . G . PASS END=204106270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,985:0,84,255:28,0 chr1 204106271 . C . PASS END=204106271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr1 204106272 . T . PASS END=204106344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,89,255:38,0 chr1 204106345 . C . PASS END=204106346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 204106347 . G . PASS END=204106351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:27,0 chr1 204106352 . C . PASS END=204106374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 204106375 . C . PASS END=204106377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 204109163 . C . PASS END=204109246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,146,255:40,1 chr1 204110344 . T . PASS END=204110350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 204110351 . T . PASS END=204110351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204110352 . G . PASS END=204110368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,823:0,63,255:26,0 chr1 204110369 . A . PASS END=204110371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:30,0 chr1 204110372 . A . PASS END=204110415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1125:0,82,255:34,0 chr1 204110443 . C . PASS END=204110509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:40:0,84,1443:0,84,255:40,0 chr1 204110510 . C . PASS END=204110546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:37:0,96,1440:0,107,255:39,0 chr1 204110547 . C T, 49.03 PASS DP=36;MQ=250.00;MQRankSum=5.078;ReadPosRankSum=2.404;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,16,0:0.444,0.000:36:10,8,0:10,8,0:48:84,0,50,564,715,1280:255,0,255:19,0:4.9031e+01,7.6105e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,4,12:13,7,6,10 chr1 204110548 . G . PASS END=204110559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:32,0 chr1 204110560 . C . PASS END=204110575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 204110576 . T . PASS END=204110584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:23:0,48,720:0,69,255:19,0 chr1 204110585 . G . PASS END=204110585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 204115770 . C . PASS END=204115892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,107,1689:0,107,255:40,0 chr1 204116000 . C . PASS END=204116006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 204116007 . C . PASS END=204116007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 204116008 . C . PASS END=204116038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,839:0,69,255:23,0 chr1 204116039 . G . PASS END=204116039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 204116040 . C . PASS END=204116045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:20,0 chr1 204116046 . T . PASS END=204116049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204116050 . G . PASS END=204116051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204116052 . A . PASS END=204116088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 204116588 . C . PASS END=204116597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 204116598 . A . PASS END=204116602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 204116603 . G . PASS END=204116630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,27,255:9,0 chr1 204116631 . G . PASS END=204116673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 204116674 . C . PASS END=204116703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr1 204118831 . C . PASS END=204118867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:18,0 chr1 204118868 . G . PASS END=204118892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:26,0 chr1 204118893 . G . PASS END=204118895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204118896 . C . PASS END=204118896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 204118897 . A . PASS END=204118899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204118900 . C . PASS END=204118900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 204118901 . C . PASS END=204118901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,911:0,53,255:26,0 chr1 204118902 . A . PASS END=204118904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 204118905 . C . PASS END=204118905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 204118906 . T . PASS END=204118917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:33,0 chr1 204118918 . T . PASS END=204118918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 204118919 . A . PASS END=204118985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1074:0,80,255:33,0 chr1 204118986 . C . PASS END=204118986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 204118987 . A . PASS END=204118993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 204118994 . C . PASS END=204118994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 204118995 . C . PASS END=204119001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 204119002 . T . PASS END=204119018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 204119019 . C . PASS END=204119036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,53,255:19,0 chr1 204119037 . G . PASS END=204119037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr1 204119038 . T . PASS END=204119039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 204119040 . C . PASS END=204119053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 204119054 . A . PASS END=204119054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr1 204119055 . G . PASS END=204119055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 204119056 . G . PASS END=204119056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:10,0 chr1 204119057 . C . PASS END=204119058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 204119059 . A . PASS END=204119059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 204119060 . C . PASS END=204119062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 204119063 . G . LowGQ END=204119064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,302:0,0,255:9,0 chr1 204119065 . T . PASS END=204119068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 204119069 . T . PASS END=204119069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:10,0 chr1 204119070 . G . PASS END=204119070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 204119071 . G . PASS END=204119071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 204119072 . T . PASS END=204119072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204119073 . G . LowGQ END=204119076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,255:0,0,255:10,0 chr1 204119077 . C . PASS END=204119077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204119078 . C . PASS END=204119078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 204119079 . A . PASS END=204119079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204119080 . T . LowGQ END=204119080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,277:14,0,255:8,0 chr1 204119081 . C . PASS END=204119081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204119082 . C . LowGQ END=204119082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,247:50,0,255:8,0 chr1 204119083 . G . PASS END=204119084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr1 204119085 . G . LowGQ END=204119085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,291:14,0,255:7,0 chr1 204119086 . A . PASS END=204119086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 204119087 . A . LowGQ END=204119088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,235:37,0,255:8,0 chr1 204119089 . C . PASS END=204119089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 204119090 . G . LowGQ END=204119090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 204120723 . C . PASS END=204120725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 204120726 . G . PASS END=204120734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:12,0 chr1 204120735 . T . PASS END=204120735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 204120736 . T . PASS END=204120744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 204120745 . T . PASS END=204120752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 204120753 . C . PASS END=204120753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 204120754 . G . PASS END=204120773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:18,0 chr1 204120774 . G . PASS END=204120777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 204120778 . A . PASS END=204120778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 204120779 . G . PASS END=204120822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:22,0 chr1 204120823 . T . PASS END=204120823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 204120824 . A . PASS END=204120838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:23,0 chr1 204120839 . C . PASS END=204120839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 204120840 . C . PASS END=204120846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 204120847 . G . PASS END=204120847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 204120848 . G . PASS END=204120860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 204120861 . C . PASS END=204120871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 204120872 . C . PASS END=204120882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 204120883 . G . PASS END=204120895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:18,0 chr1 204120896 . T . PASS END=204120911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:12,0 chr1 204120912 . C . LowGQ END=204120912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 204120913 . G . PASS END=204120926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 204120927 . C . LowGQ END=204120927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 204120928 . C . PASS END=204120932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 204120933 . C . PASS END=204120933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 204120934 . A . PASS END=204120955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 204120956 . G . PASS END=204120972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,288:0,24,255:8,0 chr1 204120973 . A . PASS END=204120980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 204124144 . T . PASS END=204124149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,929:0,75,255:25,0 chr1 204124150 . G . PASS END=204124164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:30,0 chr1 204124165 . A . PASS END=204124165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 204124166 . A . PASS END=204124211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1211:0,88,255:36,0 chr1 204124212 . A . PASS END=204124212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr1 204124213 . G . PASS END=204124216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 204124217 . G . PASS END=204124217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 204124218 . C . PASS END=204124242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1296:0,102,255:35,0 chr1 204124243 . G . PASS END=204124243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:34,0 chr1 204124244 . G . PASS END=204124274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,95,255:36,0 chr1 204124275 . G . PASS END=204124298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 204124299 . A . PASS END=204124299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 204124300 . G . PASS END=204124300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 204124301 . G . PASS END=204124301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 204124302 . A . PASS END=204124305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 204124865 . C T, 44.91 PASS DP=45;MQ=250.00;MQRankSum=5.560;ReadPosRankSum=1.908;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,17,0:0.378,0.000:45:18,7,0:10,10,0:44:80,0,50,606,963,1569:255,0,255:27,0:4.4913e+01,1.6179e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,11,9,8:15,13,11,6 chr1 204124948 . C . PASS END=204125033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:34:0,85,1135:0,85,255:40,0 chr1 204125034 . A . PASS END=204125034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:29,0 chr1 204125035 . C . PASS END=204125041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 204125042 . A . PASS END=204125046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:24,0 chr1 204125051 . G . PASS END=204125051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 204125058 . G . PASS END=204125058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 204125306 . A . PASS END=204125309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1233:0,99,255:34,0 chr1 204125310 . A . PASS END=204125430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:35:0,87,1396:0,87,255:40,0 chr1 204125431 . A . PASS END=204125447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:42:0,96,1440:0,109,255:40,0 chr1 204125805 . C . PASS END=204125810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1005:0,84,255:29,0 chr1 204125811 . A . PASS END=204125811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr1 204125812 . T . PASS END=204125815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 204125816 . A . PASS END=204125816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 204125817 . A . PASS END=204125820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1105:0,93,255:32,0 chr1 204125821 . G . PASS END=204125821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 204125822 . C . PASS END=204125924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1163:0,80,255:40,0 chr1 204126489 . T . PASS END=204126497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr1 204128527 . C . PASS END=204128527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204128528 . T . PASS END=204128531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 204128532 . G . PASS END=204128720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:30:0,81,1101:0,82,255:40,0 chr1 204128721 . C . PASS END=204128723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,102,255:22,0 chr1 204129676 . G . PASS END=204129676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 204129688 . G . PASS END=204129708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1427:0,104,255:40,0 chr1 204129709 . A . PASS END=204129806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,102,1543:0,102,255:40,0 chr1 204129819 . C . PASS END=204129819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1343:0,97,255:34,0 chr1 204130420 . C . PASS END=204130538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:34:0,81,1215:0,102,255:40,0 chr1 204130539 . T . PASS END=204130543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:38:0,75,1125:0,114,255:25,0 chr1 204131141 . G . PASS END=204131291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:36:0,90,1310:0,90,255:40,0 chr1 204135324 . C . PASS END=204135324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 204135325 . G . PASS END=204135344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,850:0,62,255:26,0 chr1 204135345 . G . PASS END=204135347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 204135348 . G . PASS END=204135348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr1 204135349 . G . PASS END=204135349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 204135350 . G . PASS END=204135350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 204135351 . A . PASS END=204135405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,86,255:35,0 chr1 204135406 . T . PASS END=204135406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 204135407 . T . PASS END=204135414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:27,0 chr1 204135415 . C . PASS END=204135421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 204135447 . T . PASS END=204135447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 204159590 . T . PASS END=204159590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:10,0 chr1 204159591 . C . LowGQ END=204159594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,512:1,0,255:10,0 chr1 204159595 . G . PASS END=204159599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,405:0,24,255:9,0 chr1 204159600 . G . PASS END=204159600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,590:0,5,255:9,0 chr1 204159601 . C . PASS END=204159602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:27:19:0,27,405:0,41,255:9,0 chr1 204159603 . C . PASS END=204159604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:20:0,30,450:0,60,255:10,0 chr1 204159605 . T . LowGQ END=204159605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,595:4,0,255:9,0 chr1 204159606 . G . PASS END=204159610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:27:20:0,27,405:0,29,255:9,0 chr1 204159611 . CT C, 49.88 PASS DP=22;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=-1.755;FractionInformativeReads=0.864;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:5,3,0:5,6,0:48:79,0,50,310,371,681:255,0,255:9,11:4.9876e+01,6.6527e-05,5.3000e+01,3.1584e+02,4.0563e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:6,4,4,5:7,3,6,3 chr1 204159612 . T . LowGQ END=204159613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:10,12:22:0:20:0,0,0:255,0,255:18,11 chr1 204159614 . A . PASS END=204159614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 204159615 . G . PASS END=204159625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 204159626 . C . PASS END=204159626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 204159627 . G . PASS END=204159630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:25,0 chr1 204159631 . C . PASS END=204159631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 204159632 . T . PASS END=204159638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,902:0,62,255:26,0 chr1 204159639 . G . PASS END=204159647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 204159648 . T . PASS END=204159648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 204159649 . G . PASS END=204159651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 204159652 . G . PASS END=204159652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 204159653 . C . PASS END=204159656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 204159657 . C . PASS END=204159657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 204159658 . C . PASS END=204159661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1143:0,80,255:32,0 chr1 204159662 . T . PASS END=204159662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr1 204159663 . G . PASS END=204159749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1119:0,81,255:40,0 chr1 204159750 . C . PASS END=204159786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1382:0,87,255:38,0 chr1 204159787 . G C, 49.94 PASS DP=35;MQ=247.92;MQRankSum=5.033;ReadPosRankSum=2.855;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:6,9,0:12,8,0:48:85,0,50,600,631,1231:255,0,255:18,0:4.9936e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,6,8,9:8,10,10,7 chr1 204159788 . G . PASS END=204159805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,88,255:31,0 chr1 204159806 . G . PASS END=204159812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 204159813 . G . PASS END=204159824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 204159825 . C . PASS END=204159830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 204159831 . A . PASS END=204159831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1137:0,66,255:29,0 chr1 204159832 . C . PASS END=204159925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1166:0,86,255:37,0 chr1 204161902 . C . PASS END=204161906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 204161907 . G . PASS END=204161907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 204161908 . G . PASS END=204161975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1105:0,80,255:34,0 chr1 204161976 . A . PASS END=204161976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 204161977 . G . PASS END=204161996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1156:0,83,255:33,0 chr1 204161997 . G . PASS END=204162004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr1 204167434 . T . PASS END=204167435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 204167436 . A . PASS END=204167436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:27,0 chr1 204167437 . G . PASS END=204167443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 204167444 . A . PASS END=204167466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:26,0 chr1 204167586 . T . PASS END=204167591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:25,0 chr1 204167592 . C . PASS END=204167619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr1 204167620 . A . PASS END=204167620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 204167621 . A . PASS END=204167621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204167622 . C . PASS END=204167624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 204168323 . C . PASS END=204168386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:34:0,91,1235:0,91,255:38,0 chr1 204170761 . T . PASS END=204170911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1189:0,89,255:40,0 chr1 204170912 . T . PASS END=204170939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,930:0,62,255:26,0 chr1 204172024 . G . PASS END=204172115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,110,1474:0,110,255:40,0 chr1 204183010 . T . PASS END=204183034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,137,255:40,0 chr1 204191855 . T . PASS END=204191870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,922:0,62,255:26,0 chr1 204191871 . T . PASS END=204191871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204191872 . G . PASS END=204191877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 204191878 . T . PASS END=204191882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:28,0 chr1 204191883 . G . PASS END=204191897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 204191898 . A . PASS END=204191907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 204192598 . T . PASS END=204192614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,639:0,57,255:19,0 chr1 204192615 . A . PASS END=204192650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 204192651 . G . PASS END=204192663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr1 204192664 . A . PASS END=204192664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:17,0 chr1 204192665 . G . PASS END=204192666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 204192667 . A . PASS END=204192668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:17,0 chr1 204192669 . C . PASS END=204192669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:17,0 chr1 204192670 . C . PASS END=204192674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,657:0,41,255:17,0 chr1 204192675 . A . PASS END=204192676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 204192677 . G . PASS END=204192677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 204192678 . C . PASS END=204192679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:16,0 chr1 204192680 . G . PASS END=204192682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 204192683 . G . PASS END=204192684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,566:0,34,255:16,0 chr1 204192685 . G . PASS END=204192686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 204192687 . T . PASS END=204192687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 204192688 . G . PASS END=204192690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 204192691 . A . PASS END=204192691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:12,0 chr1 204192692 . G . PASS END=204192694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,35,255:10,0 chr1 204192695 . C . PASS END=204192695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:9,0 chr1 204192696 . T . PASS END=204192697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:9,0 chr1 204192698 . G . PASS END=204192703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:20:12:0,20,360:0,20,255:9,0 chr1 204192704 . G . LowGQ END=204192708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:11:0,0,294:19,0,255:8,0 chr1 204192709 . T . PASS END=204192709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 204192710 . T . LowGQ END=204192712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,284:0,0,255:7,0 chr1 204192713 . A . PASS END=204192713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:7,0 chr1 204197211 . C . PASS END=204197230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,629:0,48,255:18,0 chr1 204197231 . C . PASS END=204197231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 204197232 . G . PASS END=204197243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr1 204197244 . T . PASS END=204197253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 204197254 . G . PASS END=204197254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 204197255 . C . PASS END=204197260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,787:0,66,255:23,0 chr1 204197261 . A . PASS END=204197261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:22,0 chr1 204197262 . T . PASS END=204197262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 204197263 . T . PASS END=204197263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 204197264 . T . PASS END=204197278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:25,0 chr1 204197279 . T . PASS END=204197286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 204197287 . C . PASS END=204197287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 204197288 . A . PASS END=204197290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 204197291 . T . PASS END=204197303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:26,0 chr1 204197304 . C . PASS END=204197310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 204197311 . C . PASS END=204197311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 204197312 . A . PASS END=204197327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr1 204197328 . C . PASS END=204197328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:26,0 chr1 204197329 . C . PASS END=204197334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 204197335 . G . PASS END=204197356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,970:0,67,255:26,0 chr1 204197856 . C . PASS END=204197868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:26,0 chr1 204197869 . T . PASS END=204197870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204197871 . A . PASS END=204197871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 204197872 . G . PASS END=204197874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:31,0 chr1 204197875 . T . PASS END=204197875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 204197876 . C . PASS END=204197989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:32:0,93,1288:0,96,255:40,0 chr1 204198065 . C . PASS END=204198171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1394:0,87,255:40,0 chr1 204198172 . C . PASS END=204198186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 204198187 . C . PASS END=204198208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,910:0,68,255:26,0 chr1 204198209 . A G, 50.01 PASS DP=26;MQ=250.00;MQRankSum=3.621;ReadPosRankSum=1.430;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,20,0:0.769,0.000:26:3,10,0:3,10,0:28:85,0,25,707,215,922:255,0,154:6,0:5.0007e+01,7.2502e-03,2.7804e+01,4.5000e+02,2.4939e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,6,6,14:3,3,10,10 chr1 204198210 . T . PASS END=204198227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 204198228 . C . PASS END=204198232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr1 204199541 . C . PASS END=204199576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:34:0,102,1288:0,102,255:40,0 chr1 204199577 . C . PASS END=204199613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,149,255:40,0 chr1 204199614 . C T, 50.00 PASS DP=66;MQ=250.00;MQRankSum=6.973;ReadPosRankSum=6.383;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,34,0:0.515,0.000:66:13,20,0:19,14,0:48:85,0,50,1187,1137,2324:255,0,255:30,0:5.0000e+01,6.5492e-05,5.2933e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,14,24,10:17,15,24,10 chr1 204199615 . T . PASS END=204199651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,158,255:40,0 chr1 204199652 . C . PASS END=204199717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,117,1615:0,119,255:40,0 chr1 204210503 . C . PASS END=204210530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,628:0,41,255:19,0 chr1 204210531 . C . PASS END=204210563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:24,0 chr1 204210564 . A . PASS END=204210564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 204210565 . C . PASS END=204210565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 204210566 . C . PASS END=204210569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 204210570 . T . PASS END=204210570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 204210571 . C . PASS END=204210571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 204210572 . A . PASS END=204210575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 204210576 . G . PASS END=204210576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,651:0,16,255:16,0 chr1 204210577 . T . PASS END=204210604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,675:0,41,255:18,0 chr1 204210605 . G . PASS END=204210605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 204210606 . C . PASS END=204210608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 204210609 . A . PASS END=204210609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 204210813 . C . PASS END=204210813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 204210814 . T . PASS END=204210815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 204210816 . T . PASS END=204210816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 204210817 . G . PASS END=204210822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 204210823 . A . PASS END=204210823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,288:0,2,255:10,0 chr1 204210824 . G . PASS END=204210827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:12,0 chr1 204210828 . C . PASS END=204210828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 204210829 . C . PASS END=204210842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 204210843 . C . PASS END=204210843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 204210844 . T . PASS END=204210879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 204210880 . G . PASS END=204210896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:8,0 chr1 204210897 . A . PASS END=204210931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr1 204210932 . T . PASS END=204210932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,103:0,1,103:4,0 chr1 204210933 . T . PASS END=204210942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:4,0 chr1 204212242 . C . PASS END=204212251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 204212252 . G A, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:4,0,0:3,1,0:20:15,0,50,36,250,286:15,0,247:7,0:4.2215e-02,2.0145e+01,7.3145e+01,5.5880e+01,3.0529e+02,3.0926e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,0,1:3,4,1,0 chr1 204212253 . C . PASS END=204212287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr1 204212288 . G . PASS END=204212293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 204212294 . G . PASS END=204212312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr1 204212313 . T . PASS END=204212357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 204212358 . C . PASS END=204212368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 204212369 . G . PASS END=204212370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 204212371 . A . PASS END=204212391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr1 204213992 . C . PASS END=204213994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 204213995 . G . PASS END=204214060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:18,0 chr1 204214061 . G . PASS END=204214062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204214063 . T . PASS END=204214078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,676:0,47,255:19,0 chr1 204214079 . G . PASS END=204214081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 204214082 . G . PASS END=204214087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr1 204214088 . G . PASS END=204214089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204214090 . C . PASS END=204214106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 204214107 . T . PASS END=204214107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:15,0 chr1 204214108 . A . PASS END=204214116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 204214117 . A . PASS END=204214117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 204214118 . G . PASS END=204214118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 204214119 . G . PASS END=204214131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:12,0 chr1 204214743 . C . PASS END=204214748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:26,0 chr1 204214749 . G . PASS END=204214762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:30,0 chr1 204214763 . G . PASS END=204214763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr1 204214764 . T . PASS END=204214781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1163:0,80,255:37,0 chr1 204214782 . T . PASS END=204214782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:36,0 chr1 204214783 . C . PASS END=204214854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1233:0,86,255:37,0 chr1 204216493 . C . PASS END=204216505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1252:0,102,255:35,0 chr1 204216506 . T . PASS END=204216563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:35:0,88,1213:0,88,255:40,0 chr1 204216564 . A . PASS END=204216585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,104,255:36,0 chr1 204216586 . G . PASS END=204216586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr1 204216587 . G . PASS END=204216588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 204217949 . C . PASS END=204218098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:30:0,82,1260:0,82,255:40,0 chr1 204218312 . C . PASS END=204218392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:38:0,87,1365:0,87,255:40,0 chr1 204219674 . A . PASS END=204219676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1194:0,93,255:33,0 chr1 204219677 . T . PASS END=204219677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1124:0,52,255:31,0 chr1 204219678 . G . PASS END=204219742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1168:0,83,255:36,0 chr1 204220659 . T . PASS END=204220729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1250:0,91,255:40,0 chr1 204220730 . T . PASS END=204220730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:33,0 chr1 204220731 . C . PASS END=204220731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1278:0,92,255:34,0 chr1 204220732 . T . PASS END=204220733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1243:0,70,255:34,0 chr1 204220734 . A . PASS END=204220735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1396:0,108,255:36,0 chr1 204220736 . T . PASS END=204220736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:34,0 chr1 204220737 . C . PASS END=204220739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1333:0,95,255:36,0 chr1 204224754 . C . PASS END=204224807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1294:0,92,255:40,0 chr1 204225930 . C . PASS END=204225949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:19,0 chr1 204225950 . G . PASS END=204225967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 204225968 . A . PASS END=204225968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 204225969 . G . PASS END=204225980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,807:0,63,255:22,0 chr1 204225981 . T . PASS END=204225981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 204225982 . G . PASS END=204225982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 204225983 . C . PASS END=204225983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 204225984 . A . PASS END=204225985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 204225986 . G . PASS END=204225986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 204225987 . G . PASS END=204225997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 204225998 . T . PASS END=204226016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,681:0,41,255:18,0 chr1 204226481 . C . PASS END=204226501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 204226502 . C . PASS END=204226507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,550:0,45,255:15,0 chr1 204226508 . C . PASS END=204226508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 204226509 . A . PASS END=204226526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,615:0,48,255:17,0 chr1 204226527 . G . PASS END=204226527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204226528 . C . PASS END=204226528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 204226529 . A . PASS END=204226534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 204226535 . G . PASS END=204226536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204226537 . C . PASS END=204226537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204226538 . C . PASS END=204226547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 204226548 . G . PASS END=204226560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,790:0,63,255:21,0 chr1 204226561 . C . PASS END=204226561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 204226562 . A . PASS END=204226593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,786:0,63,255:24,0 chr1 204226594 . A . PASS END=204226594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr1 204226595 . A . PASS END=204226600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 204226601 . G . PASS END=204226601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 204226602 . G . PASS END=204226638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 204226639 . C . PASS END=204226640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 204226641 . G . PASS END=204226649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 204226650 . C . PASS END=204226650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 204226651 . G . PASS END=204226672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 204226673 . C . PASS END=204226676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,828:0,53,255:19,0 chr1 204226677 . G . PASS END=204226684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204226685 . G . PASS END=204226698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204226699 . C . PASS END=204226711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 204226712 . T . PASS END=204226742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:19,0 chr1 204226743 . G . PASS END=204226743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204226744 . T . PASS END=204226756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 204226757 . C . PASS END=204226779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 204226780 . A . PASS END=204226780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 204226781 . C . PASS END=204226812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,864:0,66,255:24,0 chr1 204226813 . T . PASS END=204226813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 204226814 . G . PASS END=204226835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,878:0,69,255:24,0 chr1 204226836 . T . PASS END=204226850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,66,255:19,0 chr1 204226851 . G . PASS END=204226862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 204226863 . T . PASS END=204226863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 204226864 . C . PASS END=204226866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204226867 . A . PASS END=204226868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:46:21:0,46,706:0,46,255:21,0 chr1 204226869 . G . PASS END=204226893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,856:0,65,255:26,0 chr1 204226894 . G . PASS END=204226922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:34,0 chr1 204226923 . T . PASS END=204226925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:33,0 chr1 204226926 . T . PASS END=204226974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:30:0,87,1302:0,89,255:38,0 chr1 204226975 . A . PASS END=204226975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,924:0,70,255:28,0 chr1 204226976 . C . PASS END=204226981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204226982 . A . PASS END=204226997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,65,255:25,0 chr1 204228386 . C . PASS END=204228396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr1 204228397 . T . PASS END=204228397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 204228398 . T . PASS END=204228398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 204228399 . C . PASS END=204228407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:19,0 chr1 204228408 . G . PASS END=204228422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:25,0 chr1 204228423 . G . PASS END=204228435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 204228436 . C . PASS END=204228436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 204228437 . T . PASS END=204228442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1111:0,93,255:31,0 chr1 204228443 . T . PASS END=204228443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 204228444 . G . PASS END=204228499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1111:0,82,255:35,0 chr1 204228500 . C . PASS END=204228500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 204228501 . T . PASS END=204228505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1241:0,99,255:33,0 chr1 204228506 . C . PASS END=204228506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr1 204228507 . G . PASS END=204228548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:34,0 chr1 204228549 . T . PASS END=204228562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr1 204228563 . G . PASS END=204228573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:26:0,51,765:0,78,255:19,0 chr1 204228574 . C . PASS END=204228574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 204228575 . T . PASS END=204228575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 204228576 . G . PASS END=204228577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr1 204228578 . C . PASS END=204228619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 204228620 . C . PASS END=204228621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 204228622 . T . PASS END=204228622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 204228623 . G . PASS END=204228629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 204228630 . C . PASS END=204228631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 204228632 . G . PASS END=204228635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 204228636 . A . PASS END=204228636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 204228637 . A . PASS END=204228639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 204228640 . G . PASS END=204228640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 204228641 . C . PASS END=204228653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,984:0,72,255:26,0 chr1 204228654 . A . PASS END=204228744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,995:0,81,255:35,0 chr1 204228745 . A . PASS END=204228748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1058:0,77,255:26,0 chr1 204228749 . C . PASS END=204228750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 204228751 . T . PASS END=204228753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 204228754 . G . PASS END=204228757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 204228758 . T . PASS END=204228758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 204228759 . C . PASS END=204228760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 204228761 . C . PASS END=204228764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,954:0,67,255:26,0 chr1 204228765 . C . PASS END=204228767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 204228768 . C . PASS END=204228786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,902:0,64,255:26,0 chr1 204228787 . C . PASS END=204228788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 204228789 . C . PASS END=204228790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 204228791 . G . PASS END=204228802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:24:0,63,945:0,72,255:23,0 chr1 204228803 . C . PASS END=204228803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:19,0 chr1 204228804 . T . PASS END=204228804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 204228805 . G . PASS END=204228805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:20,0 chr1 204228806 . T . PASS END=204228826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,870:0,72,255:24,0 chr1 204228827 . T . PASS END=204228827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 204228828 . G . PASS END=204228843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 204228844 . G . PASS END=204228844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 204228845 . T . PASS END=204228847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 204228848 . T . PASS END=204228868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 204230434 . C . PASS END=204230435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 204230436 . G . PASS END=204230445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:16,0 chr1 204230446 . G . PASS END=204230465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 204230466 . G . PASS END=204230466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 204230467 . G . PASS END=204230490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,839:0,63,255:26,0 chr1 204230491 . G . PASS END=204230505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:31,0 chr1 204230506 . T . PASS END=204230506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,828:0,24,255:28,0 chr1 204230507 . G . PASS END=204230513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1109:0,82,255:32,0 chr1 204230514 . G . PASS END=204230514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,922:0,62,255:30,0 chr1 204230515 . G . PASS END=204230519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,966:0,82,255:33,0 chr1 204230520 . T . PASS END=204230520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:30,0 chr1 204230521 . T . PASS END=204230521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 204230522 . G . PASS END=204230522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1019:0,66,255:30,0 chr1 204230523 . C . PASS END=204230533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1210:0,86,255:34,0 chr1 204230534 . T . PASS END=204230534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1044:0,69,255:34,0 chr1 204230535 . C . PASS END=204230586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1197:0,91,255:38,0 chr1 204230587 . A . PASS END=204230587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:29,0 chr1 204230588 . G . PASS END=204230633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1130:0,85,255:35,0 chr1 204230634 . C . PASS END=204230636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 204234070 . C . PASS END=204234153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:93:40:0,93,1446:0,93,255:40,0 chr1 204234154 . A . PASS END=204234170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,101,1434:0,101,255:38,0 chr1 204236603 . C . PASS END=204236604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 204236605 . T . PASS END=204236605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr1 204236606 . T . PASS END=204236615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 204236616 . G . PASS END=204236616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 204236617 . A . PASS END=204236618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204236619 . G . PASS END=204236619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr1 204236620 . C . PASS END=204236620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204236621 . A . PASS END=204236621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 204236622 . G . PASS END=204236630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 204236631 . C . PASS END=204236631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 204236632 . A . PASS END=204236632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 204236633 . G . PASS END=204236633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 204236634 . G . PASS END=204236641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1131:0,80,255:31,0 chr1 204236642 . A . PASS END=204236642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:29,0 chr1 204236643 . G . PASS END=204236653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1147:0,90,255:30,0 chr1 204236654 . A . PASS END=204236654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 204236655 . C . PASS END=204236656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 204236657 . G . PASS END=204236657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 204236658 . C . PASS END=204236674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 204236675 . C . PASS END=204236675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 204237336 . C . PASS END=204237353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,795:0,72,255:25,0 chr1 204237354 . C . PASS END=204237354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 204237355 . G . PASS END=204237356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 204237357 . C . PASS END=204237357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 204237358 . T . PASS END=204237358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 204237359 . T . PASS END=204237359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 204237360 . G . PASS END=204237374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 204237375 . G . PASS END=204237375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 204237376 . G . PASS END=204237377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 204237378 . G . PASS END=204237378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204237379 . T . PASS END=204237405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,86,255:30,0 chr1 204237406 . C . PASS END=204237406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:27,0 chr1 204237407 . C . PASS END=204237413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 204237414 . G . PASS END=204237415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 204237416 . C T, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.291;ReadPosRankSum=3.860;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,18,0:0.643,0.000:28:5,8,0:5,10,0:46:85,0,45,599,358,957:255,0,255:8,0:5.0000e+01,1.0950e-04,4.8172e+01,4.5000e+02,3.9260e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,8,10:6,4,6,12 chr1 204237417 . G . PASS END=204237417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 204237418 . G . PASS END=204237418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204237419 . C . PASS END=204237419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 204237420 . T . PASS END=204237420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204237421 . T . PASS END=204237422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 204237423 . G . PASS END=204237423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:25,0 chr1 204237424 . C . PASS END=204237426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 204237427 . G . PASS END=204237427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204237428 . C . PASS END=204237434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:25,0 chr1 204237435 . A . PASS END=204237435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:22,0 chr1 204237436 . G . PASS END=204237440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:23,0 chr1 204242754 . C . PASS END=204242868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,110,1496:0,110,255:40,0 chr1 204243857 . A . PASS END=204243937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,123,255:40,0 chr1 204246124 . C . PASS END=204246155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:39:0,96,1391:0,96,255:40,0 chr1 204276465 . C . PASS END=204276465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 204276466 . T . PASS END=204276466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:21,0 chr1 204276467 . T . PASS END=204276470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr1 204276471 . T . PASS END=204276471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 204276472 . G . PASS END=204276473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 204276474 . C . PASS END=204276476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 204276477 . A . PASS END=204276478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,770:0,41,255:23,0 chr1 204276479 . G . PASS END=204276479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 204276480 . T . PASS END=204276480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:23,0 chr1 204276481 . C . PASS END=204276481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 204276482 . A . PASS END=204276484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 204276485 . A . PASS END=204276485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 204276486 . C . PASS END=204276487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 204276488 . C . PASS END=204276497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:29,0 chr1 204276498 . A . PASS END=204276498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,885:0,76,255:29,0 chr1 204276499 . C . PASS END=204276545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:32,0 chr1 204276546 . A . PASS END=204276546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:30,0 chr1 204276547 . A . PASS END=204276553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr1 204276554 . C . PASS END=204276554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 204276555 . G . PASS END=204276570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1180:0,96,255:32,0 chr1 204276571 . C . PASS END=204276585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:64:27:0,64,878:0,64,255:26,0 chr1 204276586 . A . PASS END=204276587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 204276588 . G . PASS END=204276588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 204276589 . G . PASS END=204276591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 204276592 . A . PASS END=204276592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr1 204276593 . C . PASS END=204276630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr1 204276631 . T . PASS END=204276631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 204276632 . C . PASS END=204276637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 204276638 . A . PASS END=204276665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr1 204276666 . C . PASS END=204276666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr1 204276667 . C . PASS END=204276671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 204276672 . C . PASS END=204276672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 204276673 . T . PASS END=204276679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,837:0,69,255:23,0 chr1 204276680 . A . PASS END=204276680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:20,0 chr1 204276681 . A . PASS END=204276691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 204276692 . C . PASS END=204276693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,735:0,47,255:20,0 chr1 204276694 . T . PASS END=204276694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204317876 . C . LowGQ END=204317877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,925:8,0,255:32,0 chr1 204317878 . T . PASS END=204317878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:14:37:0,14,1045:0,14,255:32,0 chr1 204317879 . A . LowGQ END=204317879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:0:36:0,0,1108:17,0,255:32,0 chr1 204317880 . G . PASS END=204317880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1096:0,44,255:32,0 chr1 204317881 . C . PASS END=204317881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:34,0 chr1 204317882 . C . PASS END=204317882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr1 204317883 . T . PASS END=204317883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1156:0,53,255:34,0 chr1 204317884 . G . PASS END=204317884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1158:0,39,255:34,0 chr1 204317885 . T . PASS END=204317885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr1 204317886 . G . PASS END=204317886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1217:0,42,255:35,0 chr1 204317887 . C . PASS END=204317888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:35,0 chr1 204317889 . C . PASS END=204317889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 204317890 . A . PASS END=204317890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:33,0 chr1 204317891 . A . PASS END=204317893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:42:38:0,42,1225:0,42,255:35,0 chr1 204317894 . C . PASS END=204317895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1340:0,81,255:34,0 chr1 204317896 . A . PASS END=204317897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1318:0,59,255:34,0 chr1 204317898 . A . PASS END=204317898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1297:0,97,255:34,0 chr1 204317899 . C . PASS END=204317899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1326:0,67,255:34,0 chr1 204317900 . T . PASS END=204317900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:36:38:0,36,1146:0,36,255:34,0 chr1 204317901 . T . PASS END=204317902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1233:0,64,255:34,0 chr1 204317903 . G . PASS END=204317903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:34,0 chr1 204317904 . C . PASS END=204317904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1178:0,39,255:34,0 chr1 204317905 . A . PASS END=204317905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:34,0 chr1 204317906 . G . LowGQ END=204317906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:0:38:0,0,1144:13,0,255:33,0 chr1 204317907 . A . PASS END=204317908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1341:0,95,255:35,0 chr1 204317909 . A . PASS END=204317909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr1 204317910 . T . PASS END=204317910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1190:0,56,255:35,0 chr1 204317911 . C . PASS END=204317912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1304:0,94,255:35,0 chr1 204317913 . T . PASS END=204317913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1235:0,64,255:35,0 chr1 204317914 . G . PASS END=204317914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1349:0,95,255:34,0 chr1 204317915 . C . PASS END=204317915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1310:0,64,255:34,0 chr1 204317916 . T . PASS END=204317917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:34,0 chr1 204317918 . A . PASS END=204317918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:33,0 chr1 204317919 . C . PASS END=204317919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:33,0 chr1 204317920 . T . PASS END=204317920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1197:0,56,255:33,0 chr1 204317921 . G . PASS END=204317921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:33,0 chr1 204317922 . T . PASS END=204317924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1317:0,95,255:33,0 chr1 204317925 . T . PASS END=204317925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1171:0,34,255:32,0 chr1 204317926 . C . PASS END=204317926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1357:0,81,255:32,0 chr1 204317927 . T . PASS END=204317927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1271:0,42,255:32,0 chr1 204317928 . C . PASS END=204317928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:32,0 chr1 204317929 . C . PASS END=204317931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1302:0,92,255:32,0 chr1 204320008 . C . PASS END=204320050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:34:0,81,1215:0,95,255:37,0 chr1 204320051 . A . PASS END=204320051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 204320052 . G . PASS END=204320054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 204320055 . C . PASS END=204320058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 204320059 . G . PASS END=204320069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:47:21:0,47,751:0,47,255:19,0 chr1 204336927 . T . PASS END=204336984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:37:0,99,1344:0,101,255:40,0 chr1 204340658 . C . PASS END=204340658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 204340659 . T . PASS END=204340668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:26,0 chr1 204340669 . G . PASS END=204340676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:28,0 chr1 204340677 . A . PASS END=204340677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:28,0 chr1 204340678 . C . PASS END=204340716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1194:0,83,255:34,0 chr1 204340717 . G . PASS END=204340718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 204340719 . T . PASS END=204340734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1133:0,87,255:30,0 chr1 204346711 . T . PASS END=204346776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1116:0,86,255:37,0 chr1 204346777 . T . PASS END=204346777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1176:0,69,255:30,0 chr1 204346778 . C . PASS END=204346789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:32:0,83,1113:0,83,255:31,0 chr1 204346790 . C . PASS END=204346793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 204369825 . T . PASS END=204369917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:62:0,120,1800:0,154,255:40,0 chr1 204375220 . T . PASS END=204375424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:80:32:0,80,1163:0,80,255:40,0 chr1 204375425 . T . PASS END=204375425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,956:0,63,255:28,0 chr1 204375426 . C . PASS END=204375434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 204375435 . A . PASS END=204375435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 204375436 . G . PASS END=204375441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1101:0,90,255:31,0 chr1 204378620 . C . PASS END=204378635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,692:0,54,255:19,0 chr1 204378636 . T . PASS END=204378669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,795:0,63,255:26,0 chr1 204378670 . G . PASS END=204378671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 204378672 . A . PASS END=204378682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 204378683 . A . PASS END=204378687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 204378688 . C . PASS END=204378688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:27,0 chr1 204378689 . A . PASS END=204378689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204378690 . C . PASS END=204378690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 204378691 . T . PASS END=204378698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 204378699 . C . PASS END=204378699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:25,0 chr1 204378700 . T . PASS END=204378704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 204378705 . A . PASS END=204378706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 204378707 . C . PASS END=204378707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:30,0 chr1 204378708 . A . PASS END=204378708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1286:0,78,255:30,0 chr1 204378709 . G . PASS END=204378725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1210:0,83,255:31,0 chr1 204378726 . A . PASS END=204378726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 204378727 . G . PASS END=204378735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr1 204378736 . G . PASS END=204378736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 204378737 . A . PASS END=204379004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1111:0,82,255:40,0 chr1 204379005 . T . PASS END=204379005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:33,0 chr1 204379006 . T . PASS END=204379033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1196:0,92,255:37,0 chr1 204379034 . A . PASS END=204379034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:33,0 chr1 204379035 . A . PASS END=204379072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1156:0,86,255:34,0 chr1 204379073 . G . PASS END=204379076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:32:0,75,1125:0,96,255:26,0 chr1 204379077 . T . PASS END=204379097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1186:0,83,255:30,0 chr1 204379098 . A . PASS END=204379098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 204379099 . A . PASS END=204379106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 204379107 . C . PASS END=204379108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 204379109 . A . PASS END=204379375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:30:0,90,1013:0,90,255:40,0 chr1 204379376 . A . PASS END=204379376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1374:0,71,255:37,0 chr1 204379377 . C . PASS END=204379444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1101:0,80,255:40,0 chr1 204379445 . T . PASS END=204379445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 204379446 . A . PASS END=204379517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1090:0,84,255:40,0 chr1 204379518 . T . PASS END=204379518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1338:0,73,255:40,0 chr1 204379519 . C . PASS END=204379521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1468:0,112,255:40,0 chr1 204379522 . T . PASS END=204379522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:49:43:0,49,1343:0,49,255:37,0 chr1 204379523 . G . PASS END=204379579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1433:0,90,255:40,0 chr1 204379580 . A . PASS END=204379616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:40:0,87,1413:0,87,255:40,0 chr1 204379617 . T C, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.158;ReadPosRankSum=1.019;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,28,0:0.538,0.000:52:10,14,0:14,14,0:48:85,0,49,957,821,1778:255,0,255:23,0:5.0000e+01,6.8081e-05,5.2474e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,19,9:12,12,9,19 chr1 204379618 . T . PASS END=204379654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,118,1800:0,118,255:40,0 chr1 204379655 . A . PASS END=204379961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1234:0,84,255:40,0 chr1 204379962 . C . PASS END=204379962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr1 204379963 . G . PASS END=204379991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1178:0,86,255:33,0 chr1 204379992 . A . PASS END=204380070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,795:0,69,255:26,0 chr1 204380071 . T . PASS END=204380071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr1 204380072 . T . PASS END=204380079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 204380080 . G . PASS END=204380080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 204380081 . G . PASS END=204380082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 204380083 . G . PASS END=204380083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 204380084 . C . PASS END=204380088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,845:0,69,255:26,0 chr1 204380089 . A . PASS END=204380091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204380092 . G . PASS END=204380101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 204380102 . C . PASS END=204380102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 204380103 . C . PASS END=204380115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:29:0,66,990:0,74,255:24,0 chr1 204380116 . A . PASS END=204380116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 204380117 . A . PASS END=204380117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 204380118 . T . PASS END=204380118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 204380119 . C . PASS END=204380177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr1 204380178 . T . PASS END=204380178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:21,0 chr1 204380179 . G . PASS END=204380183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 204380184 . G . PASS END=204380186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204380187 . G . PASS END=204380187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 204380188 . G . PASS END=204380188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 204380189 . G . PASS END=204380189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 204380190 . G . PASS END=204380192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 204380193 . G . PASS END=204380194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 204380195 . T . PASS END=204380195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 204380196 . G . PASS END=204380196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 204380197 . G . PASS END=204380206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr1 204380207 . T . PASS END=204380208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1022:0,68,255:28,0 chr1 204380209 . C . PASS END=204380215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 204380216 . G . PASS END=204380216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 204380217 . G . PASS END=204380223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1147:0,90,255:30,0 chr1 204380224 . G . PASS END=204380224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 204380225 . G . PASS END=204380225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 204380226 . G . PASS END=204380245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:26,0 chr1 204380246 . A . PASS END=204380246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:21,0 chr1 204380247 . T . PASS END=204380258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 204380259 . G . PASS END=204380259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 204380260 . T . PASS END=204380260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 204380261 . C . PASS END=204380261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 204380262 . G . PASS END=204380271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 204380272 . C . PASS END=204380272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 204380273 . A . PASS END=204380278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 204380279 . A . PASS END=204380280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:22,0 chr1 204380281 . G . PASS END=204380281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 204380282 . T . PASS END=204380282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 204380283 . T . PASS END=204380297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 204380298 . A . PASS END=204380318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,765:0,50,255:19,0 chr1 204380319 . A . PASS END=204380319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 204380320 . G . PASS END=204380320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 204380321 . C . PASS END=204380322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 204380323 . G . PASS END=204380346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,47,255:17,0 chr1 204380347 . T . PASS END=204380347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 204380348 . C . PASS END=204380349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 204380350 . T . PASS END=204380351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 204380352 . C . PASS END=204380362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:15,0 chr1 204380363 . C . PASS END=204380363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 204380364 . C . PASS END=204380366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 204380367 . G . PASS END=204380367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 204380368 . T . PASS END=204380377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 204380378 . G . PASS END=204380378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 204380379 . G . PASS END=204380383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 204380384 . G . PASS END=204380384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204380385 . G . PASS END=204380388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204380389 . G . PASS END=204380424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:21,0 chr1 204380425 . G . PASS END=204380426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 204380427 . G . PASS END=204380433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 204380434 . A . PASS END=204380434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 204380435 . C . PASS END=204380435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 204380436 . T . PASS END=204380436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:21,0 chr1 204380437 . T . PASS END=204380439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 204380440 . A . PASS END=204380440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 204380441 . A . PASS END=204380441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 204380442 . G . PASS END=204380442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 204380443 . A . PASS END=204380460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,776:0,66,255:22,0 chr1 204380461 . G . PASS END=204380464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:18,0 chr1 204380465 . G . PASS END=204380465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:17,1 chr1 204380466 . A . PASS END=204380466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:31:22:0,31,705:0,31,255:17,1 chr1 204380467 . A . PASS END=204380467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:17,0 chr1 204380468 . A . PASS END=204380518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,630:0,40,255:18,0 chr1 204380519 . T . PASS END=204380539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,482:0,39,255:13,0 chr1 204393980 . T . PASS END=204393985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:23,0 chr1 204393986 . G . PASS END=204393986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 204393987 . G . PASS END=204394142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1019:0,84,255:40,0 chr1 204394143 . C . PASS END=204394145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 204394146 . T . PASS END=204394148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:28,0 chr1 204394149 . G . PASS END=204394168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,800:0,63,255:26,0 chr1 204394741 . C . PASS END=204394742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:92:36:0,92,1291:0,92,255:38,0 chr1 204394743 . T . PASS END=204394743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1242:0,59,255:38,0 chr1 204394744 . C . PASS END=204394843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:41:0,81,1215:0,99,255:40,0 chr1 204394844 . G . PASS END=204394844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:78:46:0,78,1170:0,121,255:26,0 chr1 204394845 . G . PASS END=204394845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:47:0,81,1215:0,141,255:27,0 chr1 204394846 . G . PASS END=204394846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:66:45:0,66,990:0,135,255:22,0 chr1 204394847 . T . PASS END=204394865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:42:27:0,42,630:0,68,255:19,0 chr1 204394866 . G . PASS END=204394867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:33:25:0,33,495:0,75,255:12,0 chr1 204394868 . T . PASS END=204394869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:24:25:0,24,360:0,75,255:8,0 chr1 204396776 . C . PASS END=204396776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 204396777 . A . PASS END=204396777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr1 204396778 . A . PASS END=204396779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:32:0,93,1395:0,96,255:34,0 chr1 204396780 . C . PASS END=204396780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1184:0,58,255:31,0 chr1 204396781 . C . PASS END=204396822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1227:0,88,255:38,0 chr1 204396823 . A . PASS END=204396823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,0 chr1 204396824 . G . PASS END=204396829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1466:0,117,255:40,0 chr1 204396830 . G A,C, 49.54 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,19,0,0:0.463,0.000,0.000:41:13,10,0,0:9,9,0,0:48:84,0,50,679,765,729,679,779,1444,1458:255,0,255:21,0:4.9539e+01,7.0152e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:11,11,6,13:14,8,13,6 chr1 204396831 . G . PASS END=204396867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1397:0,81,255:40,0 chr1 204396868 . G . PASS END=204396873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1215:0,101,255:35,0 chr1 204396874 . A . PASS END=204396882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:30:0,75,1116:0,77,255:26,0 chr1 204397267 . C . PASS END=204397348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:34:0,90,1350:0,101,255:40,0 chr1 204399049 . C . PASS END=204399056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 204399057 . C . PASS END=204399060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 204399061 . A G, 49.61 PASS DP=22;MQ=247.96;MQRankSum=3.923;ReadPosRankSum=2.209;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,10,0:0.455,0.000:22:5,5,0:7,5,0:47:84,0,47,184,184,184:255,0,255:12,0:4.9606e+01,9.0861e-05,5.0000e+01,1.8438e+02,2.1915e+02,1.8739e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,6,7,3:5,7,6,4:204399061 chr1 204399062 . G . PASS END=204399063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 204399064 . G A, 49.61 PASS DP=22;MQ=247.96;MQRankSum=3.802;ReadPosRankSum=2.807;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,9,0:0.429,0.000:21:5,5,0:7,4,0:47:84,0,47,184,184,184:255,0,255:12,0:4.9606e+01,9.0861e-05,5.0000e+01,1.8438e+02,2.1915e+02,1.8739e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,6,6,3:5,7,6,3:204399061 chr1 204399065 . G . PASS END=204399088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 204399089 . T . PASS END=204399091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 204399092 . C . PASS END=204399092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 204399093 . C . PASS END=204399093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 204399094 . G . PASS END=204399094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204399095 . T . PASS END=204399095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 204399096 . T . PASS END=204399100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204399101 . T . PASS END=204399105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,47,255:18,0 chr1 204399106 . C . PASS END=204399108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:15,0 chr1 204399109 . C . PASS END=204399118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 204399119 . G . PASS END=204399128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 204399129 . C . PASS END=204399164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,398:0,36,255:13,0 chr1 204399165 . A . LowGQ END=204399165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr1 204399166 . G . PASS END=204399166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 204400797 . C . PASS END=204400921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,111,1665:0,121,255:40,0 chr1 204401328 . A . PASS END=204401354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,100,1652:0,100,255:40,0 chr1 204401355 . C . PASS END=204401391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,113,1800:0,113,255:40,0 chr1 204401392 . G C, 49.73 PASS DP=53;MQ=250.00;MQRankSum=6.227;ReadPosRankSum=3.323;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,25,0:0.472,0.000:53:11,12,0:17,13,0:48:85,0,50,877,999,1876:255,0,255:22,0:4.9730e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,11,14:12,16,16,9 chr1 204401393 . A . PASS END=204401429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:46:0,120,1800:0,125,255:40,0 chr1 204401430 . G . PASS END=204401510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1215:0,92,255:40,0 chr1 204401511 . C . PASS END=204401518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:30:0,72,1080:0,74,255:25,0 chr1 204401519 . A . PASS END=204401519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:23,0 chr1 204401520 . C . PASS END=204401529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 204402444 . C . PASS END=204402453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,731:0,60,255:26,0 chr1 204402454 . A . PASS END=204402457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 204402458 . A . PASS END=204402458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 204402459 . G . PASS END=204402477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:36,0 chr1 204402478 . C . PASS END=204402478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1266:0,37,255:36,0 chr1 204402479 . C . PASS END=204402553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1350:0,92,255:40,0 chr1 204402921 . C . PASS END=204402929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:37:0,84,1288:0,84,255:40,0 chr1 204402930 . A . PASS END=204402930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1364:0,79,255:39,0 chr1 204402931 . A . PASS END=204403077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:42:0,93,1440:0,93,255:40,0 chr1 204403567 . C . PASS END=204403567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 204403568 . G . PASS END=204403578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:30,0 chr1 204403579 . C . PASS END=204403579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 204403580 . C . PASS END=204403736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:30:0,84,1260:0,84,255:40,0 chr1 204408063 . C . PASS END=204408192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:28:0,84,980:0,84,255:40,0 chr1 204408193 . A . PASS END=204408193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr1 204408194 . C . PASS END=204408196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:29,0 chr1 204408197 . T . PASS END=204408199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:25,0 chr1 204409320 . C . PASS END=204409320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 204409321 . T . PASS END=204409322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1063:0,74,255:30,0 chr1 204409323 . T . PASS END=204409449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:31:0,87,1142:0,93,255:40,0 chr1 204410599 . C . PASS END=204410691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1800:0,131,255:40,0 chr1 204411654 . C . PASS END=204411654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 204411655 . C . PASS END=204411735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,986:0,81,255:33,0 chr1 204411736 . T . PASS END=204411745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,79,255:24,0 chr1 204411746 . C . PASS END=204411750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 204411751 . C . PASS END=204411753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 204411754 . A . PASS END=204411756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 204411757 . A . PASS END=204411758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204411759 . T . PASS END=204411759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 204411760 . C . PASS END=204411761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204412545 . C . PASS END=204412545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 204412546 . T . PASS END=204412546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 204412547 . G . PASS END=204412555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:23,0 chr1 204412556 . A . PASS END=204412556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 204412557 . T . PASS END=204412560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 204412561 . G . PASS END=204412561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:20,0 chr1 204412562 . C . PASS END=204412562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 204412563 . T . PASS END=204412564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 204412565 . C . PASS END=204412565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 204412566 . C . PASS END=204412568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 204412569 . C . PASS END=204412569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 204412570 . C . PASS END=204412571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 204412572 . G . PASS END=204412575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 204412576 . T . PASS END=204412576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 204412577 . G . PASS END=204412577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 204412578 . C . PASS END=204412581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 204412582 . G . PASS END=204412586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:30,0 chr1 204412587 . T . PASS END=204412587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 204412588 . T . PASS END=204412699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:31:0,86,1218:0,86,255:40,0 chr1 204412700 . A . PASS END=204412700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1066:0,68,255:30,0 chr1 204412701 . G . PASS END=204412704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 204412705 . T . PASS END=204412725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr1 204413196 . C . PASS END=204413255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,146,255:40,0 chr1 204413256 . A . PASS END=204413273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,147,255:40,0 chr1 204413274 . C . PASS END=204413274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:78:54:0,78,1398:0,78,255:40,0 chr1 204413275 . A . PASS END=204413275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:53:53:0,53,1396:0,53,255:40,0 chr1 204413276 . T . PASS END=204413290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,129,255:40,0 chr1 204413459 . C . PASS END=204413552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:35:0,90,1350:0,98,255:40,0 chr1 204415084 . G . PASS END=204415096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:18,0 chr1 204415097 . G . PASS END=204415106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:22,0 chr1 204415107 . A . PASS END=204415107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 204415108 . T . PASS END=204415144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:22:0,61,817:0,61,255:26,0 chr1 204415145 . C . PASS END=204415148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 204415149 . G . PASS END=204415149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 204415150 . A . PASS END=204415167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:30,0 chr1 204415168 . C . PASS END=204415169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 204415170 . C . PASS END=204415179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 204415180 . G . PASS END=204415203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,71,255:27,0 chr1 204415204 . A . PASS END=204415204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 204415205 . G . PASS END=204415205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 204415206 . C . PASS END=204415206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 204415207 . G . PASS END=204415207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 204415208 . A . PASS END=204415208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:28,0 chr1 204415209 . G . PASS END=204415209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 204415210 . C . PASS END=204415210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 204415211 . T . PASS END=204415211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:44:31:0,44,1020:0,44,255:26,0 chr1 204415212 . C . PASS END=204415212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 204415213 . A . PASS END=204415213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 204415214 . C . PASS END=204415215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 204415216 . T . PASS END=204415216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr1 204415217 . C . PASS END=204415221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:28,0 chr1 204415222 . T . PASS END=204415222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 204415223 . G . PASS END=204415223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr1 204415224 . G . PASS END=204415224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 204415225 . C . PASS END=204415225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 204415226 . A . PASS END=204415226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 204415227 . G . PASS END=204415227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:19:32:0,19,1070:0,19,255:30,0 chr1 204415228 . T . PASS END=204415228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1108:0,49,255:29,0 chr1 204415229 . A . PASS END=204415229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1131:0,80,255:30,0 chr1 204415230 . A . PASS END=204415230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr1 204415231 . T . PASS END=204415232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:49:32:0,49,1063:0,49,255:30,0 chr1 204415233 . T . PASS END=204415234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1141:0,80,255:30,0 chr1 204415235 . G . PASS END=204415235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:30,0 chr1 204415236 . C . PASS END=204415236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 204415237 . T . PASS END=204415238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1001:0,76,255:29,0 chr1 204415239 . C . PASS END=204415239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 204415240 . T . PASS END=204415240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1076:0,49,255:28,0 chr1 204415241 . C . PASS END=204415247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:29,0 chr1 204415248 . G . PASS END=204415248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 204415249 . C . PASS END=204415249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 204415250 . G . PASS END=204415250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 204415251 . C . PASS END=204415251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 204415252 . T . PASS END=204415254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1076:0,77,255:26,0 chr1 204415255 . T . PASS END=204415255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:26,0 chr1 204415256 . T . PASS END=204415259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1031:0,71,255:25,0 chr1 204415260 . A . PASS END=204415260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:23,0 chr1 204415261 . G . PASS END=204415269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:23,0 chr1 204415270 . A . PASS END=204415272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:21,0 chr1 204416109 . T . PASS END=204416110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,172,255:40,0 chr1 204416111 . A G, 49.88 PASS DP=58;MQ=250.00;MQRankSum=6.528;ReadPosRankSum=3.960;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,28,0:0.483,0.000:58:15,16,0:15,12,0:48:85,0,50,973,1065,2037:255,0,255:29,0:4.9884e+01,6.6269e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,14,17,11:15,15,19,9 chr1 204416112 . C . PASS END=204416148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,145,255:40,0 chr1 204416149 . A . PASS END=204416151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 204416564 . C . PASS END=204416565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 204416566 . G . PASS END=204416577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:44:16:0,44,590:0,44,255:19,0 chr1 204416578 . T . PASS END=204416580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 204416581 . C . PASS END=204416581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 204416582 . T . PASS END=204416587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 204416588 . A . PASS END=204416616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,654:0,41,255:19,0 chr1 204416617 . C . PASS END=204416617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,574:0,10,255:16,0 chr1 204416618 . C . PASS END=204416649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,592:0,40,255:19,0 chr1 204416650 . C . PASS END=204416650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:15,0 chr1 204416651 . T . PASS END=204416651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 204416652 . T . PASS END=204416652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr1 204416653 . G . PASS END=204416655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,540:0,51,255:17,0 chr1 204416656 . T . PASS END=204416656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:16,0 chr1 204416657 . C . PASS END=204416660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 204416661 . G . PASS END=204416661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 204416662 . G . PASS END=204416665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 204416666 . C . PASS END=204416666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,552:0,15,255:15,0 chr1 204416667 . T . PASS END=204416684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 204416685 . A . PASS END=204416685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,493:0,37,255:14,0 chr1 204416686 . G . PASS END=204416690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 204416691 . A . PASS END=204416691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:13,0 chr1 204416692 . G . PASS END=204416695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 204416696 . G . PASS END=204416696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 204416697 . G . PASS END=204416697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:11,0 chr1 204416698 . G . PASS END=204416698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr1 204416699 . A . PASS END=204416703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 204416704 . A . PASS END=204416704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 204416705 . A . PASS END=204416706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 204418313 . C . PASS END=204418424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:38:0,98,1396:0,98,255:40,0 chr1 204418978 . T . PASS END=204418998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:19,0 chr1 204418999 . G . PASS END=204419006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 204419007 . C . PASS END=204419009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204419010 . G . PASS END=204419033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:22,0 chr1 204419034 . C . PASS END=204419044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 204419045 . C . PASS END=204419102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,817:0,66,255:26,0 chr1 204419103 . T . PASS END=204419135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr1 204419136 . G . PASS END=204419145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 204423797 . T . PASS END=204423891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,96,255:40,0 chr1 204423892 . G . PASS END=204423907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:23,0 chr1 204423908 . A . PASS END=204423908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 204423909 . A . PASS END=204423919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 204424984 . C . PASS END=204424986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1056:0,87,255:30,0 chr1 204424987 . G . PASS END=204424987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:29,0 chr1 204424988 . T . PASS END=204424988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 204424989 . A . PASS END=204425179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1156:0,85,255:40,0 chr1 204426165 . C . PASS END=204426198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,117,1755:0,131,255:40,0 chr1 204426856 . C . PASS END=204426858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 204426859 . C . PASS END=204426860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr1 204426861 . G . PASS END=204426867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 204426868 . A . PASS END=204426868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 204426869 . G . PASS END=204426869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 204426870 . G . PASS END=204426870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 204426871 . C . PASS END=204426874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 204426875 . A . PASS END=204426889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,739:0,63,255:26,0 chr1 204426890 . G . PASS END=204426893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:27,0 chr1 204426894 . G . PASS END=204426894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 204426895 . C . PASS END=204426900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 204426901 . G . PASS END=204426901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 204426902 . T . PASS END=204426902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 204426903 . T . PASS END=204426903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 204426904 . G . PASS END=204426906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 204426907 . A . PASS END=204426907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,925:0,57,255:28,0 chr1 204426908 . G . PASS END=204426908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 204426909 . C . PASS END=204426921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1052:0,90,255:31,0 chr1 204426922 . A . PASS END=204426922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 204426923 . G . PASS END=204426932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 204426933 . C . PASS END=204426965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:26,0 chr1 204426966 . A . PASS END=204427002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 204429006 . A . PASS END=204429069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:37:0,95,1388:0,95,255:40,0 chr1 204429452 . C . PASS END=204429531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,165,255:40,0 chr1 204429678 . C . PASS END=204429788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1215:0,93,255:40,0 chr1 204429789 . G . PASS END=204429789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 204433140 . T . PASS END=204433227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1131:0,80,255:39,0 chr1 204433228 . T . PASS END=204433239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,976:0,65,255:26,0 chr1 204433240 . G . PASS END=204433240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 204433241 . C . PASS END=204433257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:25,0 chr1 204433258 . A . PASS END=204433260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 204433578 . A . PASS END=204433687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:39:0,84,1260:0,110,255:40,0 chr1 204433688 . T . PASS END=204433688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 204433689 . A . PASS END=204433689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 204433690 . G . PASS END=204433715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 204433716 . C . PASS END=204433732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 204434347 . A . PASS END=204434347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 204434348 . T . PASS END=204434348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,1023:0,28,255:31,0 chr1 204434349 . A . PASS END=204434350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1272:0,94,255:37,0 chr1 204434351 . C . PASS END=204434351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:6:37:0,6,1023:0,6,255:32,0 chr1 204434352 . C . PASS END=204434353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1313:0,111,255:37,0 chr1 204434354 . G . PASS END=204434354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1085:0,77,255:35,0 chr1 204434355 . C . PASS END=204434370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:37:0,84,1262:0,84,255:38,0 chr1 204434371 . G . PASS END=204434371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1241:0,67,255:35,0 chr1 204434372 . C . PASS END=204434386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:81:40:0,81,1346:0,81,255:40,0 chr1 204434387 . T . PASS END=204434387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1350:0,79,255:38,0 chr1 204434388 . C . PASS END=204434418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1338:0,87,255:40,0 chr1 204434419 . T . PASS END=204434419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1283:0,62,255:35,0 chr1 204434420 . T . PASS END=204434427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:41:0,87,1272:0,95,255:37,0 chr1 204434428 . G . PASS END=204434428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1374:0,68,255:29,0 chr1 204434429 . T . PASS END=204434443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:29,0 chr1 204434444 . C . PASS END=204434447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 204435899 . G . PASS END=204435934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:6,0 chr1 204435935 . A . PASS END=204435955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 204435956 . C . PASS END=204435974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 204435975 . G . PASS END=204435988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr1 204435989 . G . PASS END=204436001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 204436002 . G . PASS END=204436009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr1 204436010 . C . PASS END=204436070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 204436071 . C . LowGQ END=204436165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr1 204437998 . C . PASS END=204438014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 204438015 . G . PASS END=204438015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 204438016 . G . PASS END=204438016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 204438017 . C . PASS END=204438017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 204438018 . G . PASS END=204438030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 204438031 . C . PASS END=204438031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 204438032 . G . PASS END=204438040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 204438041 . T . PASS END=204438042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:14,0 chr1 204438043 . T . PASS END=204438079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,521:0,41,255:17,0 chr1 204438080 . A . PASS END=204438080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 204438081 . C . PASS END=204438082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 204438083 . T . PASS END=204438083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:15,0 chr1 204438084 . G . PASS END=204438086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 204438087 . G . PASS END=204438087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 204438088 . G . PASS END=204438093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 204438094 . A . PASS END=204438094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 204438095 . G . PASS END=204438097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,50,255:14,0 chr1 204438098 . T . PASS END=204438100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 204438101 . C . PASS END=204438114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr1 204438115 . T . PASS END=204438115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 204438116 . T . PASS END=204438116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 204438117 . T . PASS END=204438117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 204438118 . T . PASS END=204438131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 204438132 . T . PASS END=204438132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 204438133 . G . PASS END=204438189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,474:0,42,255:17,0 chr1 204438190 . C . PASS END=204438193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 204438194 . G . PASS END=204438194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 204438195 . C . PASS END=204438210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr1 204438211 . C . PASS END=204438214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,405:0,20,255:9,0 chr1 204438215 . T . PASS END=204438216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr1 204438217 . G . PASS END=204438219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 204438220 . C . PASS END=204438240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:11,0 chr1 204438241 . A . PASS END=204438249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 204438250 . G . PASS END=204438250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 204438251 . T . PASS END=204438251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 204438252 . C . PASS END=204438254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 204438255 . C . PASS END=204438270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 204438271 . C . PASS END=204438274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 204438275 . T . PASS END=204438275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 204438276 . G . PASS END=204438276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 204438277 . A . PASS END=204438277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 204438278 . C . LowGQ END=204438278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:11,0 chr1 204438279 . C . PASS END=204438281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr1 204438282 . C . PASS END=204438283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 204438284 . C . PASS END=204438285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 204438286 . T . PASS END=204438286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 204438287 . C . PASS END=204438287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 204438288 . C . PASS END=204438290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 204438291 . G . PASS END=204438291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 204438292 . C . PASS END=204438292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 204438293 . A . PASS END=204438293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:11,0 chr1 204438294 . C . PASS END=204438294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 204438295 . C . PASS END=204438296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 204438297 . C . PASS END=204438300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 204438301 . C . PASS END=204438304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 204438305 . T . PASS END=204438305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 204438306 . C . PASS END=204438309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 204438310 . G . PASS END=204438310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 204438311 . A . PASS END=204438311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 204438312 . T . PASS END=204438312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr1 204438313 . C . PASS END=204438317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 204438318 . G . PASS END=204438318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 204438319 . C . PASS END=204438319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 204438320 . T . PASS END=204438320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,566:0,20,255:16,0 chr1 204438321 . C . PASS END=204438321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 204438322 . T . PASS END=204438322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 204438323 . A . PASS END=204438331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,581:0,40,255:19,0 chr1 204438332 . C . PASS END=204438332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 204438333 . C . PASS END=204438333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,660:0,57,255:19,0 chr1 204438334 . C T, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=1.540;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,11,0:0.611,0.000:18:1,5,0:6,6,0:46:85,0,45,185,185,185:255,0,162:7,0:5.0000e+01,1.1390e-04,4.7891e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,5,5,6:4,3,3,8 chr1 204438335 . G . PASS END=204438338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,647:0,41,255:19,0 chr1 204438339 . A . PASS END=204438339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,588:0,2,255:17,0 chr1 204438340 . T . PASS END=204438361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,582:0,40,255:19,0 chr1 204438362 . T . PASS END=204438362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,590:0,18,255:15,0 chr1 204438363 . T . PASS END=204438371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 204438372 . T . PASS END=204438379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:16,0 chr1 204438380 . G . PASS END=204438380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 204438381 . A . PASS END=204438391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,607:0,54,255:19,0 chr1 204438392 . G . PASS END=204438395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 204438396 . A . PASS END=204438396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 204438397 . G . PASS END=204438403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 204438404 . C . PASS END=204438423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,49,255:19,0 chr1 204438424 . A . PASS END=204438434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 204438435 . A . PASS END=204438438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 204438439 . A . PASS END=204438451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 204438452 . G . PASS END=204438456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 204438457 . A . PASS END=204438457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 204438458 . G . PASS END=204438463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 204438464 . G . PASS END=204438486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 204438487 . C . PASS END=204438501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 204438502 . T . PASS END=204438502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 204438503 . C . PASS END=204438550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,532:0,40,255:19,0 chr1 204438551 . T . PASS END=204438551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 204438552 . A . PASS END=204438553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 204438554 . T . PASS END=204438554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:19,0 chr1 204438555 . C . PASS END=204438600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,731:0,63,255:26,0 chr1 204438601 . C . PASS END=204438601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 204438602 . C . PASS END=204438602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 204438603 . C . PASS END=204438604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1015:0,84,255:28,0 chr1 204438605 . T . PASS END=204438605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:25,0 chr1 204438606 . G . PASS END=204438610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1016:0,71,255:26,0 chr1 204438611 . G . PASS END=204438642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 204438643 . G T, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=1.244;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:4,5,0:11,10,0:48:85,0,50,529,528,1057:255,0,255:14,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,7,8:5,10,11,4 chr1 204438644 . A . PASS END=204438650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 204438651 . T . PASS END=204438651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 204438652 . G . PASS END=204438652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 204438653 . T . PASS END=204438653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 204438654 . A . PASS END=204438658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 204438659 . A . PASS END=204438659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 204438660 . G . PASS END=204438675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:32,0 chr1 204438676 . A . PASS END=204438676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,972:0,49,255:28,0 chr1 204438677 . G . PASS END=204438680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1057:0,82,255:31,0 chr1 204438681 . G . PASS END=204438681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr1 204438682 . A . PASS END=204438682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 204438683 . C . PASS END=204438691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 204438692 . A . PASS END=204438692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1031:0,27,255:26,0 chr1 204438693 . G . PASS END=204438693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 204438694 . C . PASS END=204438698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 204438699 . G . PASS END=204438752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1108:0,87,255:33,0 chr1 204438753 . A . PASS END=204438753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 204438754 . G . PASS END=204438765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 204438766 . G . PASS END=204438767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 204438768 . G . PASS END=204438769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 204438770 . T . PASS END=204438770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 204438771 . C . PASS END=204438772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 204438773 . G . PASS END=204438773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 204438774 . C . PASS END=204438775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 204438776 . T . PASS END=204438789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:28:0,69,970:0,70,255:26,0 chr1 204438790 . G . PASS END=204438828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1164:0,85,255:35,0 chr1 204438829 . A . PASS END=204438829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr1 204438830 . T . PASS END=204438880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1213:0,94,255:37,0 chr1 204438881 . A . PASS END=204438881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:34,0 chr1 204438882 . C . PASS END=204438887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,108,255:35,0 chr1 204438888 . C . PASS END=204438888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:29,0 chr1 204438889 . C . PASS END=204438896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1125:0,80,255:30,0 chr1 204438897 . T . PASS END=204438912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,886:0,61,255:26,0 chr1 204438913 . G . PASS END=204438913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:21,0 chr1 204438914 . C . PASS END=204438917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr1 204438918 . G . PASS END=204438930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:18,0 chr1 204494456 . A . PASS END=204494474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,170,255:40,0 chr1 204494612 . T . PASS END=204494711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:88:64:0,88,1755:0,88,255:40,0 chr1 204494712 . A . PASS END=204494719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:48:0,81,1215:0,108,255:39,0 chr1 204494720 . A . PASS END=204494724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:75:47:0,75,1125:0,127,255:26,0 chr1 204495488 . G . PASS END=204495548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,118,1800:0,118,255:40,0 chr1 204495549 . T . PASS END=204495562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:47:0,87,1305:0,94,255:40,0 chr1 204499812 . G . PASS END=204499945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:33:0,93,1395:0,95,255:40,0 chr1 204501319 . C . PASS END=204501374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,206,255:40,0 chr1 204501897 . A . PASS END=204501947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,155,255:40,0 chr1 204506046 . A . PASS END=204506047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:99:0,120,1800:0,255,255:40,0 chr1 204506558 . A . PASS END=204506625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,118,1576:0,118,255:40,0 chr1 204507042 . A . PASS END=204507119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,147,255:40,0 chr1 204507337 . C . PASS END=204507436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:98:38:0,98,1408:0,98,255:40,0 chr1 204511912 . A . PASS END=204512066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:31:0,85,1180:0,85,255:40,1 chr1 204512067 . A . PASS END=204512069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1048:0,62,255:28,0 chr1 204512070 . C . PASS END=204512072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 204513663 . G . PASS END=204513812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:87:40:0,87,1305:0,89,255:40,0 chr1 204515925 . G . PASS END=204516005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:35:0,81,1215:0,81,255:40,0 chr1 204516577 . A . PASS END=204516577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 204518241 . G . PASS END=204518760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:31:0,81,1215:0,93,255:40,0 chr1 204518761 . C . PASS END=204518784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,886:0,61,255:26,0 chr1 204518785 . T . PASS END=204518802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr1 204518803 . T . PASS END=204518804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:18:0,30,450:0,54,255:13,0 chr1 204518805 . G . PASS END=204518805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:10,0 chr1 204518806 . C . PASS END=204518810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr1 204586979 . T . PASS END=204586986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,558:0,48,255:17,0 chr1 204586987 . T . PASS END=204586987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 204586988 . T . PASS END=204587014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,621:0,51,255:19,0 chr1 204587015 . C . PASS END=204587015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 204587016 . C . PASS END=204587016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204587017 . C . PASS END=204587019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 204587020 . C . PASS END=204587024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204587025 . G . PASS END=204587056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,839:0,69,255:25,0 chr1 204587057 . C . PASS END=204587058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 204587059 . G . PASS END=204587115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,840:0,69,255:26,0 chr1 204587116 . A . PASS END=204587116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 204587117 . G . PASS END=204587136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr1 204587137 . T . PASS END=204587137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:24,0 chr1 204587138 . C . PASS END=204587156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,1030:0,68,255:26,0 chr1 204587157 . G . PASS END=204587158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:24,0 chr1 204587159 . T . PASS END=204587160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 204587161 . G . PASS END=204587161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:24,0 chr1 204587162 . G . PASS END=204587162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,914:0,26,255:23,0 chr1 204587163 . C . PASS END=204587163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 204587164 . C . PASS END=204587164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 204587165 . T . PASS END=204587165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:1:26:0,1,799:0,1,255:20,0 chr1 204587166 . G . PASS END=204587171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:21,0 chr1 204587172 . A . PASS END=204587172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 204587173 . G . PASS END=204587174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:20,0 chr1 204587175 . T . PASS END=204587175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 204587176 . G . PASS END=204587176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 204587177 . G . PASS END=204587177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr1 204587178 . G . PASS END=204587179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 204587180 . C . PASS END=204587180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 204587181 . G . PASS END=204587181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:20,0 chr1 204587182 . C . PASS END=204587183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,729:0,24,255:20,0 chr1 204587184 . A . PASS END=204587184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,681:0,8,255:19,0 chr1 204587185 . G . PASS END=204587185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 204587186 . C . PASS END=204587192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:20,0 chr1 204587193 . G . PASS END=204587193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 204587194 . C . PASS END=204587194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 204587195 . C . PASS END=204587204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 204587205 . A . PASS END=204587210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 204587211 . A . PASS END=204587215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204587216 . C . PASS END=204587235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 204587236 . G . PASS END=204587247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 204587248 . A . PASS END=204587252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 204587253 . C . PASS END=204587265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 204587266 . T . PASS END=204587267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 204587268 . G . PASS END=204587268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 204587269 . C . PASS END=204587269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:11,0 chr1 204587270 . C . PASS END=204587271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 204587272 . C . PASS END=204587274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 204587275 . T . PASS END=204587276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 204587277 . G . PASS END=204587280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 204587281 . T . PASS END=204587292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 204587293 . A . PASS END=204587293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 204587294 . A . PASS END=204587296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 204587297 . C . PASS END=204587298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,441:0,23,255:10,0 chr1 204587299 . A . PASS END=204587302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 204587303 . G . PASS END=204587303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr1 204587304 . G . PASS END=204587311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 204587312 . A . PASS END=204587312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 204587313 . T . PASS END=204587314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 204587315 . A . PASS END=204587315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 204587316 . G . PASS END=204587320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 204587321 . G . PASS END=204587321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 204587322 . G . PASS END=204587322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 204587323 . C . PASS END=204587323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 204587324 . C . PASS END=204587329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 204587330 . C . PASS END=204587330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 204587331 . A . PASS END=204587331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 204587332 . G . PASS END=204587332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 204587333 . G . PASS END=204587338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 204587339 . C . PASS END=204587339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 204587340 . C . PASS END=204587340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 204587341 . A . PASS END=204587341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 204587342 . G . PASS END=204587342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 204587343 . T . PASS END=204587354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 204587355 . T . PASS END=204587355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 204587356 . G . PASS END=204587356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 204587357 . A . PASS END=204587357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 204587358 . A . PASS END=204587399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr1 204587400 . C . PASS END=204587400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 204587401 . G . PASS END=204587431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:18,0 chr1 204587432 . G . PASS END=204587432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 204587433 . G . PASS END=204587438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr1 204587439 . G . PASS END=204587442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:21,0 chr1 204587443 . T . PASS END=204587443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:18,0 chr1 204587444 . G . PASS END=204587444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 204587445 . G . PASS END=204587448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 204587449 . A . PASS END=204587449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr1 204587450 . G . PASS END=204587450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 204587451 . G . PASS END=204587454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 204587455 . G . PASS END=204587455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 204587456 . G . PASS END=204587456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 204587457 . T . PASS END=204587457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:19,0 chr1 204587458 . T . PASS END=204587471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 204587472 . T . PASS END=204587472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 204587473 . T . PASS END=204587476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 204587477 . T . PASS END=204587477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 204587478 . G . PASS END=204587485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 204587486 . C . PASS END=204587486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 204587487 . C . PASS END=204587487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204587488 . A . PASS END=204587488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:19,0 chr1 204587489 . A . PASS END=204587510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 204587511 . T . PASS END=204587511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 204587512 . G . PASS END=204587553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,814:0,63,255:26,0 chr1 204587554 . T . PASS END=204587557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 204587558 . T . PASS END=204587558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 204587559 . G . PASS END=204587570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr1 204587571 . G . PASS END=204587596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr1 204587597 . C . PASS END=204587597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 204587598 . T . PASS END=204587617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1000:0,78,255:26,0 chr1 204587618 . G . PASS END=204587630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr1 204587631 . C . PASS END=204587635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 204587636 . G . PASS END=204587637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 204587638 . A . PASS END=204587639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 204587640 . A . PASS END=204587651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 204587652 . T . PASS END=204587654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 204587655 . G . PASS END=204587662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 204587663 . C . PASS END=204587663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:25,0 chr1 204587664 . C . PASS END=204587666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204587667 . C . PASS END=204587671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 204587672 . C . PASS END=204587673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204587674 . C . PASS END=204587674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 204587675 . C . PASS END=204587678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:29,0 chr1 204587679 . G . PASS END=204587680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 204587681 . C . PASS END=204587694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1056:0,87,255:29,0 chr1 204587695 . C . PASS END=204587695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 204587696 . C . PASS END=204587696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 204587697 . C . PASS END=204587701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 204587702 . C . PASS END=204587706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 204587707 . T . PASS END=204587707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 204587708 . G . PASS END=204587713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1131:0,90,255:30,0 chr1 204587714 . A . PASS END=204587734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:25:0,61,886:0,61,255:26,0 chr1 204587735 . C . PASS END=204587735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 204587736 . C . PASS END=204587745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 204587746 . T . PASS END=204587746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 204587747 . G . PASS END=204587750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 204587751 . C . PASS END=204587751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 204587752 . A . PASS END=204587793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,854:0,69,255:26,0 chr1 204587794 . G . PASS END=204587794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 204587795 . C . PASS END=204587796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 204587797 . C . PASS END=204587797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 204587798 . C . PASS END=204587798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:18,0 chr1 204587799 . A . PASS END=204587802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 204587803 . T . PASS END=204587814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,61,255:20,0 chr1 204587815 . C . PASS END=204587832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,684:0,46,255:19,0 chr1 204587833 . G . PASS END=204587840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 204587841 . C . PASS END=204587847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 204587848 . A . PASS END=204587848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 204587849 . G . PASS END=204587860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr1 204587861 . A . PASS END=204587882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,760:0,63,255:21,0 chr1 204587883 . A . PASS END=204587883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 204587884 . A . PASS END=204587887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:21,0 chr1 204587888 . C . PASS END=204587888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204587889 . A . PASS END=204587891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204587892 . T . PASS END=204587898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 204587899 . C . PASS END=204587936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:20:0,60,775:0,60,255:26,0 chr1 204587937 . G . PASS END=204587949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 204587950 . C . PASS END=204587950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 204587951 . G . PASS END=204587998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1133:0,90,255:33,0 chr1 204587999 . G . PASS END=204587999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 204588000 . T . PASS END=204588132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1194:0,83,255:36,0 chr1 204588133 . C . PASS END=204588133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr1 204588134 . G . PASS END=204588141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,96,255:31,0 chr1 204588142 . G . PASS END=204588170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 204588171 . A . PASS END=204588171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 204588172 . T . PASS END=204588193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 204588194 . G . PASS END=204588194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr1 204588195 . A . PASS END=204588221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 204588222 . G . PASS END=204588222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 204588223 . A . PASS END=204588232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr1 204588233 . C . PASS END=204588233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 204588234 . T . PASS END=204588238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 204588239 . G . PASS END=204588254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,58,255:21,0 chr1 204588255 . T . PASS END=204588257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,690:0,24,255:20,0 chr1 204588258 . T . PASS END=204588262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204588263 . G . PASS END=204588272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 204588273 . T . PASS END=204588275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204588276 . G . PASS END=204588280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,621:0,43,255:19,0 chr1 204588281 . G . PASS END=204588302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:23,0 chr1 204588303 . A . PASS END=204588303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 204588304 . G . PASS END=204588304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 204588305 . C . PASS END=204588305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 204588306 . G . PASS END=204588311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 204588312 . T . PASS END=204588312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 204588313 . T . PASS END=204588315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 204588316 . T . PASS END=204588321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 204588322 . C . PASS END=204588322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204588323 . T . PASS END=204588323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 204588324 . A . PASS END=204588324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204588325 . G . PASS END=204588326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr1 204588327 . A . PASS END=204588330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204588331 . T . PASS END=204588332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,751:0,47,255:19,0 chr1 204588333 . A . PASS END=204588337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 204588338 . G . PASS END=204588338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 204588339 . G . PASS END=204588343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 204588344 . C . PASS END=204588372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:19,0 chr1 204588373 . C . PASS END=204588373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 204588374 . C . PASS END=204588374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 204588375 . A . PASS END=204588375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,531:0,23,255:15,0 chr1 204588376 . G . PASS END=204588377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 204588378 . T . PASS END=204588378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 204588379 . G . PASS END=204588391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:16,0 chr1 204588392 . G . PASS END=204588392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 204588393 . G . PASS END=204588394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:17,0 chr1 204588395 . G . PASS END=204588396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,37,255:11,0 chr1 204588397 . G . PASS END=204588399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 204588400 . T . PASS END=204588402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,59,255:16,0 chr1 204588403 . C . PASS END=204588403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:14,0 chr1 204588404 . C . PASS END=204588409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:18,0 chr1 204588410 . T . PASS END=204588410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:18,0 chr1 204588411 . T . PASS END=204588414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,721:0,57,255:19,0 chr1 204588415 . G . PASS END=204588415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:16,0 chr1 204588416 . C . PASS END=204588428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr1 204588429 . T . PASS END=204588429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:15,0 chr1 204588430 . A . PASS END=204588430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 204588431 . G . PASS END=204588433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:17,0 chr1 204588434 . G A, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.510;ReadPosRankSum=3.243;FractionInformativeReads=0.947;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,10,0:0.556,0.000:18:3,8,0:5,2,0:48:85,0,50,321,286,607:255,0,255:5,0:5.0000e+01,6.7304e-05,5.2604e+01,3.2089e+02,3.2095e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,5,5:2,6,5,5 chr1 204588435 . G . PASS END=204588450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:43:16:0,43,540:0,43,255:17,0 chr1 204588451 . T . PASS END=204588451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 204588452 . C . PASS END=204588452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 204588453 . A . PASS END=204588454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 204588455 . G . PASS END=204588471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,645:0,54,255:19,0 chr1 204588472 . T . PASS END=204588477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 204588478 . G . PASS END=204588497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 204588498 . T . PASS END=204588498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 204588499 . T . PASS END=204588499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 204588500 . C . PASS END=204588500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 204588501 . A . PASS END=204588508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 204588509 . G . PASS END=204588509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 204588510 . A . PASS END=204588518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:25,0 chr1 204588519 . A . PASS END=204588519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 204588520 . C . PASS END=204588535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,917:0,62,255:26,0 chr1 204588536 . C . PASS END=204588538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,1 chr1 204588539 . G . PASS END=204588605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:25:0,61,826:0,61,255:26,0 chr1 204588606 . A . PASS END=204588606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 204588607 . G . PASS END=204588641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,897:0,62,255:26,0 chr1 204588642 . G . PASS END=204588642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 204588643 . C . PASS END=204588643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 204588644 . C . PASS END=204588644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 204588645 . C . PASS END=204588649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 204588650 . G . PASS END=204588653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204588654 . A . PASS END=204588654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:26,0 chr1 204588655 . T . PASS END=204588656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 204588657 . C . PASS END=204588660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 204588661 . A . PASS END=204588661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1048:0,54,255:27,0 chr1 204588662 . G . PASS END=204588670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 204588671 . G . PASS END=204588672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 204588673 . G . PASS END=204588673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204588674 . G . PASS END=204588695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,911:0,67,255:26,0 chr1 204588696 . C . PASS END=204588700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 204588701 . C . PASS END=204588705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 204588706 . C . PASS END=204588739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1102:0,87,255:30,0 chr1 204588740 . G . PASS END=204588778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,71,255:26,0 chr1 204588779 . A . PASS END=204588779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 204588780 . T . PASS END=204588795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 204588796 . G . PASS END=204588796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 204588797 . G . PASS END=204588799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 204588800 . A . PASS END=204588801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 204588802 . C . PASS END=204588810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 204588811 . T . PASS END=204588836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:19,0 chr1 204588837 . A . PASS END=204588837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 204588838 . G . PASS END=204588849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 204588850 . A . PASS END=204588850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr1 204588851 . G . PASS END=204588854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,630:0,41,255:15,0 chr1 204588855 . A . PASS END=204588855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 204588856 . G . PASS END=204588861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 204588862 . T . PASS END=204588887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr1 204588888 . C . PASS END=204588890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 204588891 . T . PASS END=204588912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 204588913 . C . PASS END=204588920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 204588921 . A . PASS END=204588921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 204588922 . G . PASS END=204588954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:17,0 chr1 204588955 . T . PASS END=204588955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 204588956 . G . PASS END=204588965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 204588966 . G . PASS END=204588970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 204588971 . A . PASS END=204588972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 204588973 . C . PASS END=204589013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:25,0 chr1 204589014 . T . PASS END=204589014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 204589015 . G . PASS END=204589031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,984:0,78,255:26,0 chr1 204589032 . G . PASS END=204589041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 204589042 . C . PASS END=204589063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,947:0,75,255:25,0 chr1 204589064 . A . PASS END=204589064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr1 204589065 . G . PASS END=204589071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 204589072 . T . PASS END=204589073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 204589074 . G . PASS END=204589120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,922:0,62,255:26,0 chr1 204797804 . A . PASS END=204797825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:9,0 chr1 204797826 . G . PASS END=204797869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 204797870 . A . PASS END=204797870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 204797871 . G . PASS END=204797910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr1 204839951 . A . PASS END=204839951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 204839952 . T . PASS END=204839952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 204839953 . G . PASS END=204839956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 204839957 . G . PASS END=204840198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1031:0,81,255:40,0 chr1 204889760 . G . PASS END=204889854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:36:0,89,1413:0,89,255:40,0 chr1 204889855 . A . PASS END=204889855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:30,0 chr1 204889856 . T . PASS END=204889866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:30,0 chr1 204889867 . A . PASS END=204889868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 204913354 . C . PASS END=204913515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:39:0,87,1396:0,87,255:40,0 chr1 204913516 . A . PASS END=204913516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1318:0,70,255:36,0 chr1 204913517 . T . PASS END=204913523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1321:0,87,255:39,0 chr1 204913524 . T . PASS END=204913524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1269:0,54,255:31,0 chr1 204913525 . C . PASS END=204913525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 204913526 . C . PASS END=204913527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:39:0,70,1288:0,70,255:32,0 chr1 204913528 . A . PASS END=204913529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1278:0,53,255:32,0 chr1 204913530 . G . PASS END=204913533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1347:0,84,255:31,0 chr1 204913534 . C . PASS END=204913534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1225:0,39,255:29,0 chr1 204919685 . C . PASS END=204919702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,152,255:40,0 chr1 204921139 . T . PASS END=204921220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,111,1762:0,111,255:40,0 chr1 204921221 . A . PASS END=204921239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:38:0,81,1215:0,99,255:40,1 chr1 204921240 . C . PASS END=204921244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:37:0,66,990:0,111,255:25,0 chr1 204923316 . C . PASS END=204923316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 204923317 . T . PASS END=204923318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,684:0,44,255:19,0 chr1 204923319 . C . PASS END=204923319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 204923320 . C . PASS END=204923321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 204923322 . C . PASS END=204923322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 204923323 . T . PASS END=204923333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr1 204923334 . C . PASS END=204923334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 204923335 . A . PASS END=204923336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 204923337 . C . PASS END=204923338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,775:0,50,255:22,0 chr1 204923339 . G . PASS END=204923347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,756:0,69,255:23,0 chr1 204923348 . A . PASS END=204923348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 204923349 . C . PASS END=204923349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 204923350 . A . PASS END=204923350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 204923351 . T . PASS END=204923356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 204923357 . A . PASS END=204923357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 204923358 . G . PASS END=204923369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,858:0,62,255:26,0 chr1 204923370 . G . PASS END=204923371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 204923372 . C . PASS END=204923383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 204923384 . G . PASS END=204923384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:23,0 chr1 204923385 . G . PASS END=204923391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 204923392 . A . PASS END=204923392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 204923393 . C . PASS END=204923394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 204923395 . C . PASS END=204923406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:25,0 chr1 204923407 . T . PASS END=204923407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr1 204923408 . T . PASS END=204923417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr1 204923418 . C . PASS END=204923418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,890:0,39,255:23,0 chr1 204923419 . G . PASS END=204923428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:24,0 chr1 204923429 . A . PASS END=204923429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 204923430 . G . PASS END=204923432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 204923433 . A . PASS END=204923433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:23,0 chr1 204923434 . T . PASS END=204923448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:24,0 chr1 204923449 . C . PASS END=204923449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:21,0 chr1 204923450 . A . PASS END=204923461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,778:0,66,255:22,0 chr1 204923462 . G . PASS END=204923462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr1 204923463 . C . PASS END=204923475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr1 204923476 . A . PASS END=204923502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr1 204923503 . C . PASS END=204923504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 204923505 . G . PASS END=204923506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 204923507 . T . PASS END=204923508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 204923509 . T . PASS END=204923509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,449:0,15,255:11,0 chr1 204923510 . C . PASS END=204923512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 204923957 . A . PASS END=204923958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 204923959 . T . PASS END=204923959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,996:0,59,255:28,0 chr1 204923960 . C . PASS END=204923960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 204923961 . T . PASS END=204924026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1135:0,83,255:40,0 chr1 204924027 . G . PASS END=204924027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1364:0,78,255:32,0 chr1 204924028 . T . PASS END=204924036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:34:0,93,1395:0,98,255:32,0 chr1 204924037 . C . PASS END=204924037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:31,0 chr1 204924038 . C . PASS END=204924061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1117:0,80,255:32,0 chr1 204924062 . T . PASS END=204924062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,873:0,46,255:24,0 chr1 204924063 . C . PASS END=204924064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:27,0 chr1 204924065 . T . PASS END=204924079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,906:0,62,255:26,0 chr1 204926784 . C . PASS END=204926808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1019:0,84,255:33,0 chr1 204926809 . A . PASS END=204926809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1044:0,71,255:32,0 chr1 204926810 . C . PASS END=204926954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:35:0,84,1260:0,84,255:40,0 chr1 204931236 . A . PASS END=204931286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:35:0,93,1395:0,105,255:40,0 chr1 204937377 . C . PASS END=204937380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 204937381 . A . PASS END=204937382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 204937383 . G . PASS END=204937391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 204937392 . A . PASS END=204937392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 204937393 . A . PASS END=204937396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 204937397 . A . PASS END=204937397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 204937398 . C . PASS END=204937408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 204937409 . A . PASS END=204937421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 204937422 . G . PASS END=204937431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 204937432 . C . PASS END=204937477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,537:0,45,255:19,0 chr1 204937478 . G . PASS END=204937480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 204937481 . T . PASS END=204937482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 204937483 . C . PASS END=204937488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,495:0,31,255:12,0 chr1 204937926 . C . PASS END=204937927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 204937928 . C . PASS END=204937941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1070:0,87,255:29,0 chr1 204937942 . G . PASS END=204937942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 204937943 . C . PASS END=204937945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 204937946 . G . PASS END=204937946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:27,0 chr1 204937947 . G . PASS END=204938103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1241:0,89,255:40,0 chr1 204938104 . G . PASS END=204938104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:27,0 chr1 204938105 . T . PASS END=204938105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 204938106 . A . PASS END=204938107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 204938108 . A . PASS END=204938108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1056:0,44,255:21,0 chr1 204938109 . G . PASS END=204938110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:23,0 chr1 204939744 . C . PASS END=204939754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:32,0 chr1 204939755 . T . PASS END=204939755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:30,0 chr1 204939756 . G . PASS END=204939857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1174:0,89,255:39,0 chr1 204939858 . A . PASS END=204939875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:23:0,62,922:0,62,255:26,0 chr1 204942404 . C . PASS END=204942547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:33:0,99,1255:0,99,255:40,0 chr1 204943307 . A . PASS END=204943314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 204943315 . C . PASS END=204943322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 204943323 . G . PASS END=204943399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1078:0,80,255:33,0 chr1 204943400 . C . PASS END=204943418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,945:0,78,255:25,0 chr1 204943696 . C . PASS END=204943714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1153:0,80,255:33,0 chr1 204943785 . G . PASS END=204943951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,105,1558:0,106,255:40,0 chr1 204944399 . A . PASS END=204944401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 204944402 . C . PASS END=204944402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 204944403 . C . PASS END=204944404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 204944405 . C . PASS END=204944405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 204944406 . C . PASS END=204944406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 204944407 . A . PASS END=204944407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 204944408 . G . PASS END=204944410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 204944411 . T . PASS END=204944411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 204944412 . C . PASS END=204944413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 204944414 . A . PASS END=204944414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 204944415 . C . PASS END=204944422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:17,0 chr1 204944423 . C . PASS END=204944423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 204944424 . C . PASS END=204944444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,609:0,51,255:18,0 chr1 204944445 . G . PASS END=204944458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 204944459 . A . PASS END=204944459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 204944460 . G . PASS END=204944505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,878:0,69,255:26,0 chr1 204944506 . T . PASS END=204944506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 204944507 . C . PASS END=204944531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,842:0,65,255:26,0 chr1 204944532 . C . PASS END=204944535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:45:27:0,45,675:0,64,255:15,0 chr1 204944536 . A . PASS END=204944536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,869:0,34,255:13,0 chr1 204944537 . T . PASS END=204944543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,537:0,48,255:16,0 chr1 204944544 . C . PASS END=204944544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 204944545 . A . PASS END=204944545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 204944546 . G . PASS END=204944546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 204945799 . G . PASS END=204945807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 204945808 . G . PASS END=204945828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1072:0,84,255:31,0 chr1 204945829 . C . PASS END=204945829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 204945830 . T . PASS END=204945904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1065:0,82,255:33,0 chr1 204945905 . G . PASS END=204945916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:27:0,63,945:0,81,255:26,0 chr1 204945917 . G . PASS END=204945917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:20,0 chr1 204945918 . T . PASS END=204945937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,762:0,62,255:23,0 chr1 204945938 . T . PASS END=204945940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 204945941 . C . PASS END=204945941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 204945942 . C . PASS END=204945952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:20:0,44,712:0,44,255:18,0 chr1 204946809 . C . PASS END=204946853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:38:0,81,1288:0,81,255:40,0 chr1 204948096 . G . PASS END=204948114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:25,0 chr1 204948115 . G . PASS END=204948142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1024:0,81,255:34,0 chr1 204948143 . A . PASS END=204948143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1264:0,77,255:33,0 chr1 204948144 . G . PASS END=204948148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1274:0,102,255:35,0 chr1 204948149 . G . PASS END=204948149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 204948150 . T . PASS END=204948197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,92,255:36,0 chr1 204948490 . A . PASS END=204948535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:27,0 chr1 204948536 . G . PASS END=204948571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:38,0 chr1 204948572 . A . PASS END=204948572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1276:0,75,255:37,0 chr1 204948573 . G . PASS END=204948667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:35:0,84,1294:0,84,255:40,0 chr1 204948668 . C . PASS END=204948668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:31,0 chr1 204948669 . T . PASS END=204948677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1210:0,86,255:30,0 chr1 204948678 . A . PASS END=204948685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,77,255:26,0 chr1 204948686 . A . PASS END=204948686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 204948687 . C . PASS END=204948687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 204949498 . C . PASS END=204949502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1076:0,87,255:29,0 chr1 204949503 . G . PASS END=204949503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:28,0 chr1 204949504 . A . PASS END=204949565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1163:0,89,255:37,0 chr1 204949566 . A . PASS END=204949568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 204950926 . C . PASS END=204950946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,908:0,62,255:25,0 chr1 204950947 . T . PASS END=204950947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 204950948 . T . PASS END=204950950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr1 204950951 . G . PASS END=204950954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 204950955 . C . PASS END=204950969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,955:0,67,255:26,0 chr1 204950970 . T . PASS END=204950971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 204950972 . T . PASS END=204950973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1047:0,71,255:27,0 chr1 204950974 . A . PASS END=204950987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 204950988 . A . PASS END=204950988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1052:0,74,255:29,0 chr1 204950989 . G . PASS END=204950992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,951:0,90,255:30,0 chr1 204950993 . C . PASS END=204950993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 204950994 . T . PASS END=204951005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1164:0,89,255:32,0 chr1 204951006 . G . PASS END=204951006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:30,0 chr1 204951007 . A . PASS END=204951015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 204951016 . A . PASS END=204951018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 204951019 . G . PASS END=204951034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1263:0,89,255:34,0 chr1 204951035 . A . PASS END=204951035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1224:0,69,255:34,0 chr1 204951036 . C . PASS END=204951063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1349:0,84,255:39,0 chr1 204951064 . C . PASS END=204951064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:35,0 chr1 204951065 . C . PASS END=204951076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,108,1451:0,114,255:38,0 chr1 204951077 . G . PASS END=204951077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:37,0 chr1 204951078 . A . PASS END=204951133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1260:0,81,255:38,0 chr1 204951134 . A . PASS END=204951134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 204951135 . C . PASS END=204951138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 204951139 . G . PASS END=204951148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,77,255:26,0 chr1 204953155 . A . PASS END=204953155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 204953156 . T . PASS END=204953197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:40,0 chr1 204953198 . C . PASS END=204953198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:39,0 chr1 204953199 . A . PASS END=204953199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 204953200 . G . PASS END=204953200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:40,0 chr1 204953201 . C . PASS END=204953315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,111,1484:0,112,255:40,0 chr1 204955038 . G . PASS END=204955042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 204955043 . C . PASS END=204955043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 204955044 . T . PASS END=204955064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,840:0,69,255:26,0 chr1 204955065 . C . PASS END=204955242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:27:0,80,981:0,80,255:40,0 chr1 204956546 . T . PASS END=204956551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:43:0,82,1457:0,82,255:40,0 chr1 204956552 . G . PASS END=204956552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:21:44:0,21,1299:0,21,255:40,0 chr1 204956553 . T . PASS END=204956553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1397:0,68,255:40,0 chr1 204956554 . G . PASS END=204956655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:84:31:0,84,1260:0,93,255:40,0 chr1 204956656 . A . PASS END=204956664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:26,0 chr1 204956665 . G . PASS END=204956668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:25:0,54,810:0,75,255:19,0 chr1 204957761 . T . PASS END=204957923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1305:0,90,255:40,0 chr1 204957924 . C . PASS END=204957924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 204957925 . C . PASS END=204957925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 204957926 . C . PASS END=204957926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 204957927 . G . PASS END=204957933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 204957934 . G . PASS END=204957934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 204960420 . C . PASS END=204960434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1059:0,85,255:33,0 chr1 204966298 . C . PASS END=204966309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 204966310 . T . PASS END=204966310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 204966311 . G . PASS END=204966316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 204966317 . G . PASS END=204966319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 204966320 . T . PASS END=204966320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 204966321 . A . PASS END=204966323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 204966324 . G . PASS END=204966324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 204966325 . T . PASS END=204966335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:26,0 chr1 204966336 . G . PASS END=204966340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 204966341 . T . PASS END=204966341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 204966342 . G . PASS END=204966390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1305:0,90,255:40,0 chr1 204966391 . C . PASS END=204966427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,125,255:40,0 chr1 204966428 . C G, 48.03 PASS DP=62;MQ=249.63;MQRankSum=6.628;ReadPosRankSum=3.537;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,26,0:0.426,0.000:61:19,13,0:16,13,0:47:83,0,50,890,1251,2141:255,0,255:34,0:4.8034e+01,9.0084e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,19,13,13:16,19,12,14 chr1 204966429 . G . PASS END=204966465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,114,1800:0,114,255:40,2 chr1 204966466 . C . PASS END=204966527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:37:0,87,1449:0,87,255:40,2 chr1 204966528 . G . PASS END=204966534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,105,255:26,0 chr1 204967727 . G . PASS END=204967737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,140,255:40,0 chr1 204970298 . C . PASS END=204970301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1429:0,117,255:39,0 chr1 204970302 . T C, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.282;ReadPosRankSum=1.515;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,22,0:0.564,0.000:39:7,11,0:10,11,0:48:85,0,49,750,608,1358:255,0,255:17,0:5.0000e+01,7.2740e-05,5.1708e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,13,9:11,6,10,12 chr1 204970303 . G . PASS END=204970339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:39:0,83,1386:0,83,255:40,0 chr1 204970340 . A . PASS END=204970392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,120,1746:0,120,255:40,0 chr1 204970393 . T . PASS END=204970393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1339:0,77,255:40,0 chr1 204970394 . T . PASS END=204970414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:43:0,89,1527:0,89,255:40,0 chr1 204971724 . G . PASS END=204971737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 204971738 . A . PASS END=204971738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 204971739 . A . PASS END=204971739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 204971740 . A . PASS END=204971740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 204971741 . A . PASS END=204971749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,405:0,39,255:13,0 chr1 204971750 . G . PASS END=204971750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 204971751 . T . PASS END=204971754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 204971755 . G . PASS END=204971765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr1 204971766 . A . PASS END=204971766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 204971767 . G . PASS END=204971802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,907:0,62,255:26,0 chr1 204971803 . A G, 47.30 PASS DP=26;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=1.028;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,10,0:0.385,0.000:26:11,6,0:5,4,0:46:82,0,50,358,515,872:255,0,255:15,0:4.7297e+01,1.0277e-04,5.3000e+01,3.5760e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,4,6:7,9,4,6 chr1 204971804 . T . PASS END=204971814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,945:0,75,255:25,0 chr1 204971815 . G . PASS END=204971815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 204971816 . G . PASS END=204971817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 204971818 . T . PASS END=204971818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 204971819 . T . PASS END=204971821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 204971822 . T . PASS END=204971822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 204971823 . C . PASS END=204971826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 204971827 . G . PASS END=204971827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 204971828 . G . PASS END=204971840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 204971841 . T . PASS END=204971858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr1 204971859 . C . PASS END=204971859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 204971860 . C . PASS END=204971862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 204971863 . T . PASS END=204971866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,707:0,49,255:19,0 chr1 204971867 . A . PASS END=204971868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 204971869 . C . PASS END=204971871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 204971872 . T . PASS END=204971872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:15,0 chr1 204971873 . A . PASS END=204971876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:17,0 chr1 204978685 . C . PASS END=204978816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:31:0,85,1119:0,85,255:40,0 chr1 204981925 . T . PASS END=204981994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,106,1677:0,106,255:40,0 chr1 204985436 . T . PASS END=204985436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 204985437 . G . PASS END=204985441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 204985442 . G . PASS END=204985442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:30,0 chr1 204985443 . G . PASS END=204985628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:31:0,83,1113:0,83,255:40,0 chr1 204985629 . G . PASS END=204985629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:28,0 chr1 204985630 . C . PASS END=204985638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 204985639 . C . PASS END=204985639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 204985640 . T . PASS END=204985642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 204985643 . C . PASS END=204985667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,999:0,71,255:26,0 chr1 205022314 . A . PASS END=205022315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,887:0,61,255:26,0 chr1 205022316 . G . PASS END=205022316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 205022317 . G . PASS END=205022317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 205022318 . G . PASS END=205022332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 205022333 . G . PASS END=205022334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 205022335 . A . PASS END=205022346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 205022347 . C . PASS END=205022347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 205022348 . T . PASS END=205022353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205022354 . T . PASS END=205022354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 205022355 . A . PASS END=205022363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205022364 . G . PASS END=205022383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1008:0,78,255:26,0 chr1 205026336 . G . PASS END=205026391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1188:0,85,255:37,0 chr1 205026484 . A . PASS END=205026538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,114,1710:0,119,255:40,0 chr1 205026940 . A . PASS END=205027027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,89,255:37,0 chr1 205027028 . T . PASS END=205027030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 205027031 . T . PASS END=205027035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 205027036 . T . PASS END=205027036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 205027037 . C . PASS END=205027059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:29,0 chr1 205027060 . G . PASS END=205027093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,860:0,60,255:26,0 chr1 205027094 . T . PASS END=205027157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1033:0,83,255:32,0 chr1 205027158 . A . PASS END=205027158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 205027159 . T . PASS END=205027159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205027160 . G . PASS END=205027160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:26,0 chr1 205027161 . C . PASS END=205027191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 205027192 . C . PASS END=205027192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 205027193 . G . PASS END=205027193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 205027199 . G . PASS END=205027199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 205027309 . G . PASS END=205027315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,906:0,72,255:24,0 chr1 205027316 . A . PASS END=205027316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 205027317 . T . PASS END=205027323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 205027324 . T . PASS END=205027324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 205027325 . A . PASS END=205027328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 205027329 . A . PASS END=205027329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 205027330 . G . PASS END=205027350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 205027351 . C . PASS END=205027351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 205027352 . C . PASS END=205027352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 205027353 . G . PASS END=205027386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,66,255:26,0 chr1 205027387 . G . PASS END=205027388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205027389 . A . PASS END=205027389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 205027390 . C T, 49.17 PASS DP=28;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=1.830;FractionInformativeReads=0.964;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:10,7,0:5,5,0:48:84,0,50,400,534,934:255,0,255:13,0:4.9166e+01,7.4293e-05,5.3000e+01,4.0037e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,5,7:11,4,6,6 chr1 205027391 . C . PASS END=205027403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:24,0 chr1 205027404 . A . PASS END=205027404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 205027405 . G . PASS END=205027411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 205027412 . G . PASS END=205027414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 205027415 . G . PASS END=205027423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 205027424 . T . PASS END=205027424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 205027425 . G . PASS END=205027427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 205027428 . T . PASS END=205027428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 205027429 . G . PASS END=205027450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,570:0,40,255:19,0 chr1 205027451 . G . PASS END=205027451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr1 205027452 . T . PASS END=205027459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 205027460 . A . PASS END=205027460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,537:0,24,255:16,0 chr1 205027461 . G . PASS END=205027463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 205027464 . A . PASS END=205027464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,627:0,18,255:17,0 chr1 205027465 . G . PASS END=205027470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,607:0,43,255:19,0 chr1 205027471 . C . PASS END=205027471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr1 205027472 . C . PASS END=205027483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr1 205027484 . T . PASS END=205027484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:15,0 chr1 205027632 . A . PASS END=205027632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205027633 . T . PASS END=205027633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 205027634 . G . PASS END=205027649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,65,255:26,0 chr1 205027650 . C . PASS END=205027655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr1 205027656 . C . PASS END=205027656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 205027657 . C . PASS END=205027699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1161:0,80,255:33,0 chr1 205027700 . G . PASS END=205027715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1266:0,91,255:33,0 chr1 205027716 . G . PASS END=205027718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1233:0,64,255:32,1 chr1 205027719 . G . PASS END=205027736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:36,0 chr1 205027737 . G A, 48.92 PASS DP=36;MQ=249.84;MQRankSum=4.441;ReadPosRankSum=3.454;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,16,0:0.444,0.000:36:13,7,0:7,9,0:47:84,0,50,535,707,1242:255,0,255:18,0:4.8923e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,6,10:10,10,9,7 chr1 205027738 . C . PASS END=205027770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:34,0 chr1 205027771 . A . PASS END=205027789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,68,255:25,0 chr1 205027790 . A C, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.468;ReadPosRankSum=2.073;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:7,6,0:6,9,0:48:85,0,50,537,436,973:255,0,255:10,0:5.0000e+01,6.7304e-05,5.2620e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,10,4,11:9,4,9,6 chr1 205027791 . G . PASS END=205027791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 205028212 . G . PASS END=205028214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 205028215 . T . PASS END=205028215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,0 chr1 205028216 . G . PASS END=205028220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 205028221 . A . PASS END=205028221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 205028222 . C . PASS END=205028223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 205028224 . G . PASS END=205028224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 205028225 . C . PASS END=205028225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205028226 . T . PASS END=205028226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 205028227 . G . PASS END=205028232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 205028233 . T . PASS END=205028233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 205028234 . C . PASS END=205028237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,809:0,69,255:23,0 chr1 205028238 . G . PASS END=205028238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 205028239 . A . PASS END=205028241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 205028242 . T . PASS END=205028242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 205028243 . C . PASS END=205028254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr1 205028255 . C . PASS END=205028269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 205028270 . T . PASS END=205028270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 205028271 . C . PASS END=205028286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:30,0 chr1 205028287 . C . PASS END=205028287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 205028288 . C . PASS END=205028310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1096:0,80,255:31,0 chr1 205028311 . G . PASS END=205028311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 205028312 . A . PASS END=205028337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1141:0,93,255:32,0 chr1 205028338 . A . PASS END=205028338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr1 205028339 . C . PASS END=205028349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 205028350 . C . PASS END=205028350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:26,0 chr1 205028351 . C . PASS END=205028353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 205028354 . C . PASS END=205028357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 205028358 . C . PASS END=205028361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 205028362 . T . PASS END=205028362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 205028363 . G . PASS END=205028369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 205028370 . T . PASS END=205028370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 205028371 . C . PASS END=205028376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 205028377 . A . PASS END=205028378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 205028379 . A . PASS END=205028379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 205028380 . G . PASS END=205028380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 205028381 . C . PASS END=205028382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205028383 . T . PASS END=205028383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:24,0 chr1 205028384 . C . PASS END=205028401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,68,255:26,0 chr1 205028402 . G . PASS END=205028419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:24,0 chr1 205028420 . A . PASS END=205028421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,853:0,56,255:19,0 chr1 205028711 . A . PASS END=205028719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 205028720 . T . PASS END=205028720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:28,0 chr1 205028721 . C . PASS END=205028726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205028727 . A . PASS END=205028727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 205028728 . C . PASS END=205028743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1027:0,87,255:29,0 chr1 205028744 . G . PASS END=205028744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 205028745 . G . PASS END=205028805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1094:0,83,255:31,0 chr1 205028806 . G . PASS END=205028810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr1 205030373 . C . PASS END=205030511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1033:0,80,255:38,0 chr1 205030512 . G . PASS END=205030520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr1 205030521 . A . PASS END=205030542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:41:19:0,41,630:0,41,255:19,0 chr1 205030543 . T . PASS END=205030548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,51,255:13,0 chr1 205030553 . A . PASS END=205030553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 205030993 . C . PASS END=205030996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 205030997 . G . PASS END=205031078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,751:0,60,255:25,0 chr1 205031079 . C . PASS END=205031084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 205031085 . C . PASS END=205031099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:19,0 chr1 205031100 . C . PASS END=205031100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205031101 . T . PASS END=205031101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 205031102 . G . PASS END=205031111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 205031112 . G . PASS END=205031115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr1 205031116 . C T, 49.57 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=2.507;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,9,0:0.450,0.000:20:7,6,0:4,3,0:48:84,0,50,322,393,715:255,0,255:8,0:4.9567e+01,6.9634e-05,5.3000e+01,3.2183e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,9,4,5:6,5,5,4 chr1 205031117 . T . PASS END=205031126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:16,0 chr1 205031127 . C . PASS END=205031129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 205031568 . A . PASS END=205031697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:44:0,111,1637:0,119,255:40,1 chr1 205033449 . G . PASS END=205033455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 205033456 . C . PASS END=205033484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr1 205033485 . C . PASS END=205033485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 205033486 . G . PASS END=205033500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 205033501 . C . PASS END=205033501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 205033502 . C . PASS END=205033510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 205033511 . A . PASS END=205033511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1007:0,73,255:27,0 chr1 205033512 . G . PASS END=205033512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 205033513 . A . PASS END=205033515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,899:0,67,255:26,0 chr1 205033516 . T . PASS END=205033517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 205033518 . C . PASS END=205033518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:29,0 chr1 205033519 . T . PASS END=205033520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 205033521 . A . PASS END=205033521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr1 205033522 . T . PASS END=205033528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1186:0,83,255:30,0 chr1 205033529 . C . PASS END=205033529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 205033530 . C . PASS END=205033557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:32,0 chr1 205033558 . T . PASS END=205033578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:26:0,64,834:0,64,255:26,0 chr1 205033579 . A . PASS END=205033580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205033581 . A . PASS END=205033581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,930:0,67,255:27,0 chr1 205033582 . T . PASS END=205033589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 205033590 . A . PASS END=205033600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,68,255:25,0 chr1 205033751 . A . PASS END=205033878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:43:0,84,1260:0,101,255:40,0 chr1 205034215 . A . PASS END=205034219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 205034220 . A . PASS END=205034220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 205034221 . C . PASS END=205034223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:24,0 chr1 205034224 . A . PASS END=205034224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 205034225 . A . PASS END=205034230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr1 205034231 . T . PASS END=205034231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:24,0 chr1 205034232 . C . PASS END=205034238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:26,0 chr1 205034239 . C . PASS END=205034240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205034241 . T . PASS END=205034241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 205034242 . C . PASS END=205034245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205034246 . T . PASS END=205034246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 205034247 . G . PASS END=205034257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr1 205034258 . C . PASS END=205034258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 205034259 . T . PASS END=205034265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1105:0,80,255:31,0 chr1 205034266 . A . PASS END=205034267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,981:0,57,255:31,0 chr1 205034268 . A . PASS END=205034270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1156:0,83,255:36,0 chr1 205034271 . C . PASS END=205034271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 205034272 . T . PASS END=205034276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,105,1575:0,108,255:39,0 chr1 205034277 . C . PASS END=205034277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1434:0,76,255:37,0 chr1 205034278 . T . PASS END=205034290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1384:0,81,255:38,0 chr1 205034291 . C . PASS END=205034291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:30,0 chr1 205034292 . T . PASS END=205034297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,95,255:30,0 chr1 205034298 . G . PASS END=205034298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:28,0 chr1 205034299 . A . PASS END=205034306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:31,0 chr1 205034307 . A . PASS END=205034307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr1 205034308 . T . PASS END=205034313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1061:0,85,255:31,0 chr1 205034314 . T . PASS END=205034315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1148:0,66,255:30,0 chr1 205034316 . A . PASS END=205034317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1235:0,88,255:31,0 chr1 205034318 . C . PASS END=205034318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:31,0 chr1 205034319 . T . PASS END=205034319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 205034320 . T . PASS END=205034320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1102:0,44,255:31,0 chr1 205034321 . C . PASS END=205034321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 205034322 . A . PASS END=205034323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:29,0 chr1 205034324 . C . PASS END=205034324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:28,0 chr1 205034325 . T . PASS END=205034325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:28,0 chr1 205034326 . G . PASS END=205034330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:27,0 chr1 205034331 . C . PASS END=205034332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:26,0 chr1 205034333 . G . PASS END=205034335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:28,0 chr1 205034336 . C . PASS END=205034337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:30:0,58,1049:0,58,255:27,0 chr1 205034338 . A . PASS END=205034339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 205034340 . T . PASS END=205034340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 205034341 . T . PASS END=205034342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 205034343 . C . PASS END=205034344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205034345 . C . PASS END=205034346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 205034347 . T . PASS END=205034349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205034350 . A . PASS END=205034350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 205034351 . C . PASS END=205034351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205034352 . T . PASS END=205034370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 205034371 . A . PASS END=205034371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:19,0 chr1 205034372 . C . PASS END=205034373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 205034374 . A . PASS END=205034374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 205034375 . C . PASS END=205034375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:19,0 chr1 205034376 . C . PASS END=205034378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 205034379 . A . PASS END=205034379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 205034380 . G . PASS END=205034380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 205034381 . A . PASS END=205034382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:20,0 chr1 205034383 . C . PASS END=205034383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205034384 . T . PASS END=205034385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 205034386 . A . PASS END=205034386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,589:0,30,255:18,0 chr1 205034387 . T . PASS END=205034387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 205034388 . G . PASS END=205034390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205034917 . A . PASS END=205034922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 205034923 . A . PASS END=205034931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,942:0,81,255:30,0 chr1 205034932 . G . PASS END=205034932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 205034933 . A . PASS END=205034964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1194:0,93,255:33,0 chr1 205034965 . G . PASS END=205034965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:32,0 chr1 205034966 . G . PASS END=205034989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1133:0,90,255:33,0 chr1 205034990 . A . PASS END=205035037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:25,0 chr1 205035198 . G . PASS END=205035208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,872:0,64,255:25,0 chr1 205035569 . G . PASS END=205035577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 205035578 . G . PASS END=205035589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 205035590 . G . PASS END=205035590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 205035591 . T . PASS END=205035609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,937:0,62,255:26,0 chr1 205035610 . G . PASS END=205035704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1002:0,81,255:40,0 chr1 205035705 . G . PASS END=205035727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,68,255:26,0 chr1 205036229 . A . PASS END=205036229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:28,0 chr1 205036230 . T . PASS END=205036233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 205036234 . G . PASS END=205036234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 205036235 . C . PASS END=205036237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 205036238 . A . PASS END=205036238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,887:0,70,255:28,0 chr1 205036239 . C . PASS END=205036244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 205036245 . G . PASS END=205036245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr1 205036246 . G . PASS END=205036344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1127:0,85,255:40,0 chr1 205036345 . G . PASS END=205036345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:26,0 chr1 205036346 . G . PASS END=205036349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205036350 . C . PASS END=205036378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,892:0,61,255:26,0 chr1 205038619 . C . PASS END=205038619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 205038620 . C . PASS END=205038631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr1 205038632 . A . PASS END=205038632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 205038633 . C . PASS END=205038681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:31,0 chr1 205038682 . A . PASS END=205038689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:28:0,73,890:0,73,255:26,0 chr1 205038694 . G . PASS END=205038694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 205038955 . C . PASS END=205038955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 205038956 . C . PASS END=205038956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 205038957 . C . PASS END=205038962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:23,0 chr1 205038963 . A . PASS END=205038963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 205038964 . C . PASS END=205039000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:23:0,68,831:0,68,255:26,0 chr1 205039001 . T . PASS END=205039054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1055:0,80,255:34,0 chr1 205039055 . C . PASS END=205039055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:30,0 chr1 205039056 . C . PASS END=205039056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1164:0,96,255:32,0 chr1 205039057 . G . PASS END=205039057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 205039058 . A . PASS END=205039059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 205039060 . G . PASS END=205039066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:34:0,84,1260:0,89,255:29,0 chr1 205039067 . A . PASS END=205039067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:28,0 chr1 205039068 . C . PASS END=205039115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr1 205039116 . C . PASS END=205039116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 205039117 . A . PASS END=205039121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 205039122 . C . PASS END=205039122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 205039123 . C . PASS END=205039130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 205039131 . C . PASS END=205039131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 205039132 . A . PASS END=205039133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 205039134 . C . PASS END=205039145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 205039146 . T . PASS END=205039146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 205039147 . G . PASS END=205039158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 205039159 . C . PASS END=205039159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 205039160 . T . PASS END=205039162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205039163 . C . PASS END=205039171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,50,255:19,0 chr1 205039172 . T . PASS END=205039177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:16,0 chr1 205039178 . C . PASS END=205039189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,540:0,32,255:13,0 chr1 205039552 . A . PASS END=205039552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 205039554 . A . PASS END=205039554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 205039555 . G . PASS END=205039655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:28:0,80,958:0,80,255:39,0 chr1 205039656 . T . PASS END=205039663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:30:0,60,900:0,82,255:22,0 chr1 205039664 . G . PASS END=205039666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:29:0,57,855:0,87,255:19,0 chr1 205039669 . G . PASS END=205039669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 205041075 . A . PASS END=205041076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 205041077 . C . PASS END=205041077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 205041078 . C . PASS END=205041081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr1 205041082 . A . PASS END=205041082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,872:0,50,255:26,0 chr1 205041083 . C . PASS END=205041095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr1 205041096 . G . PASS END=205041096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 205041097 . A . PASS END=205041103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205041104 . A . PASS END=205041104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 205041105 . G . PASS END=205041109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1141:0,87,255:30,0 chr1 205041110 . T . PASS END=205041110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 205041111 . G . PASS END=205041120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1066:0,90,255:31,0 chr1 205041121 . T . PASS END=205041157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1194:0,83,255:35,0 chr1 205041158 . C T, 49.44 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=2.036;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,16,0:0.457,0.000:35:8,8,0:11,8,0:48:84,0,50,572,679,1251:255,0,255:19,0:4.9437e+01,7.1187e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,5,11:11,8,9,7 chr1 205041159 . G . PASS END=205041171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1357:0,105,255:35,0 chr1 205041172 . A . PASS END=205041172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr1 205041173 . C . PASS END=205041195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1208:0,83,255:34,0 chr1 205041196 . G . PASS END=205041222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,86,255:35,0 chr1 205041223 . C . PASS END=205041223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 205041224 . T . PASS END=205041224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 205041225 . G . PASS END=205041225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 205041226 . C . PASS END=205041229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 205041230 . C . PASS END=205041246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 205041247 . C . PASS END=205041261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,643:0,40,255:19,0 chr1 205041611 . C . PASS END=205041621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr1 205041622 . C . PASS END=205041679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:32,0 chr1 205041680 . C . PASS END=205041680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 205041681 . T . PASS END=205041687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 205041688 . C . PASS END=205041688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:26,0 chr1 205041689 . C . PASS END=205041689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205041690 . T . PASS END=205041723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,61,255:26,0 chr1 205042196 . A . PASS END=205042196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 205042197 . T . PASS END=205042409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,970:0,81,255:40,0 chr1 205042410 . C . PASS END=205042410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:32,0 chr1 205042411 . A . PASS END=205042668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1041:0,83,255:40,0 chr1 205042669 . G . PASS END=205042691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:25,0 chr1 205042692 . T . PASS END=205042696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 205042784 . G . PASS END=205042789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:19,0 chr1 205042790 . G . PASS END=205042790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 205042791 . C . PASS END=205042802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 205042803 . G . PASS END=205042807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 205042808 . T . PASS END=205042808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 205042809 . G . PASS END=205042839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr1 205042840 . G A, 41.61 PASS DP=21;MQ=250.00;MQRankSum=3.464;ReadPosRankSum=3.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,6,0:0.286,0.000:21:11,2,0:4,4,0:41:76,0,50,207,500,706:162,0,255:14,0:4.1614e+01,3.2126e-04,5.3000e+01,2.0662e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,3,3:8,7,5,1 chr1 205042841 . T . PASS END=205042841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 205042842 . C . PASS END=205042843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205042844 . T . PASS END=205042844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 205042845 . T . PASS END=205042847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205042848 . C . PASS END=205042855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 205042856 . T . PASS END=205042869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 205042870 . C . PASS END=205042870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 205042871 . T . PASS END=205042873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 205042874 . T . PASS END=205042874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 205042875 . A . PASS END=205042877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 205042878 . C . PASS END=205042901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,780:0,69,255:23,0 chr1 205042902 . C . PASS END=205042926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,847:0,69,255:25,0 chr1 205042927 . C . PASS END=205042927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr1 205042928 . G . PASS END=205042938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 205042939 . C T, 39.76 PASS DP=22;MQ=250.00;MQRankSum=3.502;ReadPosRankSum=1.585;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,6,0:0.273,0.000:22:6,2,0:10,4,0:40:75,0,50,215,572,786:166,0,255:15,0:3.9759e+01,4.8073e-04,5.3000e+01,2.1456e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,2,4:7,9,4,2 chr1 205042940 . G . PASS END=205042943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 205042944 . A . PASS END=205042976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,593:0,54,255:19,0 chr1 205042977 . G . PASS END=205042980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 205042981 . C . PASS END=205042999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:10:0,30,372:0,30,255:11,0 chr1 205043000 . G . PASS END=205043006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 205043225 . A . PASS END=205043225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 205043226 . G . PASS END=205043226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 205043227 . A . PASS END=205043227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,856:0,50,255:26,0 chr1 205043228 . T . PASS END=205043235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 205043236 . T . PASS END=205043240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 205043241 . C . PASS END=205043248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 205043249 . G . PASS END=205043249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 205043250 . G . PASS END=205043387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1096:0,81,255:40,0 chr1 205043388 . G . PASS END=205043392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr1 205043393 . C . PASS END=205043422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 205043423 . C . PASS END=205043429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,59,255:17,0 chr1 205043430 . C T, 50.00 PASS DP=23;MQ=248.81;MQRankSum=3.370;ReadPosRankSum=2.425;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,14,0:0.609,0.000:23:5,7,0:4,7,0:47:85,0,47,493,277,770:255,0,242:6,0:5.0000e+01,8.3095e-05,5.0383e+01,4.5000e+02,3.1181e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,5,9:2,7,8,6 chr1 205043431 . G . PASS END=205043434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:17:0,48,720:0,51,255:17,0 chr1 205043435 . A . PASS END=205043435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 205043436 . C . PASS END=205043454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,553:0,48,255:17,0 chr1 205043455 . T . PASS END=205043455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:15,0 chr1 205043456 . G . PASS END=205043461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 205043462 . G . PASS END=205043463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 205043464 . G . PASS END=205043465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 205043466 . C . PASS END=205043467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 205043468 . G . PASS END=205043468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 205043469 . A . PASS END=205043469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 205052681 . T . PASS END=205052682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 205052683 . A . PASS END=205052683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 205052684 . C . PASS END=205052685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 205052686 . G . PASS END=205052722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:31:0,93,1157:0,93,255:40,0 chr1 205052723 . C T, 39.82 PASS DP=48;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=4.276;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,16,0:0.333,0.000:48:16,6,0:16,10,0:40:75,0,50,543,1136,1679:255,0,255:31,0:3.9815e+01,4.7503e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,13,12,4:23,9,8,8 chr1 205052724 . A . PASS END=205052760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,124,255:40,0 chr1 205052761 . T . PASS END=205052901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:41:0,91,1440:0,91,255:40,0 chr1 205052902 . G . PASS END=205052938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,114,1713:0,114,255:40,0 chr1 205052939 . G A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=6.049;ReadPosRankSum=1.641;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,26,0:0.520,0.000:50:13,11,0:11,15,0:48:85,0,50,857,801,1657:255,0,255:23,0:5.0000e+01,6.6010e-05,5.2860e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,13,9,17:10,14,14,12 chr1 205052940 . A . PASS END=205052976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,105,1665:0,105,255:40,0 chr1 205052977 . A . PASS END=205053112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,108,1678:0,108,255:40,0 chr1 205053113 . A . PASS END=205053149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:44:0,120,1800:0,125,255:40,0 chr1 205053150 . A G, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.669;ReadPosRankSum=2.641;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,22,0:0.500,0.000:44:8,12,0:14,10,0:48:85,0,50,779,778,1557:255,0,255:22,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,10,12:13,9,14,8 chr1 205053151 . A . PASS END=205053218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:34:0,89,1241:0,89,255:40,0 chr1 205053219 . C T, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.820;ReadPosRankSum=1.453;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,21,0:0.618,0.000:34:6,11,0:7,10,0:46:85,0,46,722,465,1187:255,0,255:13,0:5.0000e+01,9.7591e-05,4.9047e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,6,15:7,6,16,5 chr1 205053220 . G . PASS END=205053237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1026:0,82,255:32,0 chr1 205053238 . T . PASS END=205053238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:30,0 chr1 205053239 . C . PASS END=205053256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1294:0,92,255:36,0 chr1 205053257 . C . PASS END=205053297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,998:0,82,255:34,0 chr1 205053298 . C . PASS END=205053299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,92,255:26,0 chr1 205053300 . G . PASS END=205053301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 205053302 . A . PASS END=205053316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 205053317 . G . PASS END=205053317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205053318 . A . PASS END=205053328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 205053329 . C . PASS END=205053332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 205053333 . A . PASS END=205053359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,930:0,72,255:25,0 chr1 205053360 . G . PASS END=205053360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 205053361 . C . PASS END=205053377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:26,0 chr1 205053378 . G . PASS END=205053378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205053379 . T . PASS END=205053390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 205053391 . G . PASS END=205053391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:22,0 chr1 205053392 . C . PASS END=205053395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 205053396 . T . PASS END=205053408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 205053409 . C . PASS END=205053409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,851:0,31,255:19,0 chr1 205053410 . C . PASS END=205053418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:21,0 chr1 205053419 . A . PASS END=205053421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 205053422 . G . PASS END=205053432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:20,0 chr1 205053433 . T . PASS END=205053448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,698:0,46,255:19,0 chr1 205057915 . T . PASS END=205057943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:66:0,120,1800:0,182,255:40,0 chr1 205064001 . C . PASS END=205064002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 205064003 . G . PASS END=205064006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 205064007 . A . PASS END=205064007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:30,0 chr1 205064008 . G . PASS END=205064190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:32:0,90,1316:0,92,255:40,0 chr1 205064191 . T . PASS END=205064192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:39:0,75,1125:0,117,255:25,0 chr1 205065810 . C . PASS END=205065995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1215:0,87,255:40,0 chr1 205065996 . T . PASS END=205065996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 205065997 . G . PASS END=205065998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205065999 . G . PASS END=205066020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:24,0 chr1 205066021 . A . PASS END=205066029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr1 205066030 . C . PASS END=205066036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr1 205066037 . T . PASS END=205066039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,696:0,44,255:19,0 chr1 205066454 . C . PASS END=205066456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:26,0 chr1 205066457 . C . PASS END=205066463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 205066464 . A . PASS END=205066464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 205066465 . G . PASS END=205066510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1094:0,84,255:30,0 chr1 205066511 . G . PASS END=205066523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr1 205068117 . C . PASS END=205068234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:34:0,102,1203:0,102,255:40,0 chr1 205068869 . T . PASS END=205068940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:49:0,120,1800:0,147,255:40,0 chr1 205069039 . A . PASS END=205069183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1155:0,80,255:40,0 chr1 205069184 . C . PASS END=205069184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 205069185 . A . PASS END=205069192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1097:0,93,255:32,0 chr1 205069280 . C . PASS END=205069399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,113,1800:0,113,255:40,0 chr1 205070728 . C . PASS END=205070785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:31:0,84,927:0,84,255:40,0 chr1 205070786 . T . PASS END=205070786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1637:0,75,255:40,0 chr1 205070787 . C . PASS END=205070807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,114,1710:0,122,255:40,0 chr1 205070808 . A . PASS END=205070808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1319:0,73,255:34,0 chr1 205070809 . T . PASS END=205070837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1351:0,97,255:38,0 chr1 205072985 . C . PASS END=205073147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,116,1620:0,116,255:40,0 chr1 205074156 . T . PASS END=205074157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,129,255:40,0 chr1 205074158 . A . PASS END=205074275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:31:0,84,1260:0,92,255:40,0 chr1 205074276 . T . PASS END=205074296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,947:0,65,255:26,0 chr1 205083917 . C . PASS END=205083920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 205083921 . A . PASS END=205083921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 205083922 . A . PASS END=205083922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 205083923 . G . PASS END=205083923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,864:0,47,255:24,0 chr1 205083924 . A . PASS END=205083927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,854:0,61,255:25,0 chr1 205083928 . C . PASS END=205084067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,1016:0,81,255:40,0 chr1 205084068 . A . PASS END=205084068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1239:0,34,255:30,0 chr1 205084069 . A . PASS END=205084072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:29,0 chr1 205084073 . A . PASS END=205084082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,96,255:25,0 chr1 205084083 . C . PASS END=205084083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 205084084 . A . PASS END=205084084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 205084085 . G . PASS END=205084087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205084088 . T . PASS END=205084088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,983:0,71,255:28,0 chr1 205084089 . C . PASS END=205084089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205084986 . C . PASS END=205085011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:82:0,120,1800:0,216,255:40,0 chr1 205090983 . C . PASS END=205091000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:38:0,84,1260:0,87,255:38,0 chr1 205091001 . T . PASS END=205091001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 205116686 . T . PASS END=205116741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1017:0,83,255:37,0 chr1 205116742 . G . PASS END=205116742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:30,0 chr1 205116743 . A . PASS END=205116866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1142:0,86,255:40,0 chr1 205116867 . C . PASS END=205116873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 205117333 . C . PASS END=205117440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,102,1245:0,103,255:40,0 chr1 205117441 . A . PASS END=205117441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:33,0 chr1 205117442 . G . PASS END=205117448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1288:0,92,255:35,0 chr1 205117449 . A . PASS END=205117449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:32,0 chr1 205117450 . C . PASS END=205117464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1215:0,85,255:32,0 chr1 205117465 . T . PASS END=205117467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 205119808 . C . PASS END=205119922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,116,1635:0,116,255:40,0 chr1 205126401 . C . PASS END=205126514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,114,1710:0,131,255:40,0 chr1 205128675 . C . PASS END=205128679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 205128680 . G . PASS END=205128683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 205128684 . T . PASS END=205128684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 205128685 . G . PASS END=205128685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 205128686 . T . PASS END=205128686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 205128687 . G . PASS END=205128688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr1 205128689 . A . PASS END=205128689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 205128690 . G . PASS END=205128691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1140:0,93,255:31,0 chr1 205128692 . G . PASS END=205128693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,965:0,76,255:30,0 chr1 205128694 . T . PASS END=205128807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1141:0,82,255:40,0 chr1 205129190 . C . PASS END=205129281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:38:0,84,1325:0,84,255:40,0 chr1 205129282 . T . PASS END=205129318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,140,255:40,0 chr1 205129319 . G A, 46.57 PASS DP=50;MQ=249.88;MQRankSum=5.931;ReadPosRankSum=3.277;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,20,0:0.400,0.000:50:20,12,0:10,8,0:46:81,0,50,715,1073,1788:255,0,255:28,0:4.6571e+01,1.1727e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,7,13:16,14,9,11 chr1 205129320 . A . PASS END=205129354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:33:0,84,1260:0,99,255:40,0 chr1 205129355 . A . PASS END=205129356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:22,0 chr1 205129357 . C . PASS END=205129366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,80,255:23,0 chr1 205129367 . C . PASS END=205129377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:22:0,54,810:0,58,255:19,0 chr1 205129378 . C . PASS END=205129381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 205129382 . T . PASS END=205129383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,759:0,50,255:20,0 chr1 205129384 . C . PASS END=205129386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205129387 . G . PASS END=205129388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 205129389 . T . PASS END=205129390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205129391 . A . PASS END=205129391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:19,0 chr1 205129392 . G . PASS END=205129398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 205130386 . G . PASS END=205130386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 205130387 . A . PASS END=205130387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:27,0 chr1 205130388 . T . PASS END=205130391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:31,0 chr1 205130392 . G . PASS END=205130392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 205130393 . C . PASS END=205130393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr1 205130394 . A . PASS END=205130394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 205130395 . A . PASS END=205130412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1117:0,82,255:39,0 chr1 205130413 . A G, 169.93 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,22,0:0,19,0:120:208,123,0,1552,123,1552:255,123,0:0,0:1.6993e+02,1.1993e+02,0.0000e+00,4.5000e+02,1.5470e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,18:0,0,20,21 chr1 205130414 . G . PASS END=205130450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,103,1358:0,103,255:40,0 chr1 205130451 . T . PASS END=205130503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1161:0,85,255:40,0 chr1 205130504 . G . PASS END=205130515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr1 205130518 . G . PASS END=205130518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 205131164 . C . PASS END=205131312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,962:0,81,255:40,0 chr1 205131313 . G . PASS END=205131313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr1 205131314 . G . PASS END=205131316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 205131317 . C . PASS END=205131321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,68,255:23,0 chr1 205131322 . A . PASS END=205131328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:24:0,54,810:0,67,255:19,0 chr1 205131329 . G . PASS END=205131329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 205131330 . C . PASS END=205131340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:20:0,42,630:0,44,255:19,0 chr1 205132051 . C . PASS END=205132134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,120,1800:0,131,255:40,0 chr1 205132851 . C . PASS END=205132851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 205132852 . T . PASS END=205132852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 205132853 . G . PASS END=205132855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,587:0,24,255:20,0 chr1 205132856 . T . PASS END=205132856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 205132857 . G . PASS END=205132857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 205132858 . A . PASS END=205132858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 205132859 . G . PASS END=205132859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 205132860 . A . PASS END=205132860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 205132861 . T . PASS END=205132872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,760:0,63,255:27,0 chr1 205132873 . A . PASS END=205133042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:28:0,84,967:0,84,255:40,0 chr1 205133043 . T . PASS END=205133067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,886:0,75,255:25,0 chr1 205133068 . T . PASS END=205133068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 205133069 . C . PASS END=205133079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:24,0 chr1 205133080 . A . PASS END=205133080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr1 205133081 . C . PASS END=205133083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 205138291 . C . PASS END=205138529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:38:0,90,1395:0,90,255:40,0 chr1 205138530 . A . PASS END=205138530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:30,0 chr1 205138531 . G . PASS END=205138575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1143:0,86,255:32,0 chr1 205138576 . A . PASS END=205138576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1025:0,63,255:30,0 chr1 205138577 . A . PASS END=205138595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:32,0 chr1 205138596 . A . PASS END=205138597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 205138598 . C . PASS END=205138598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 205138599 . T . PASS END=205138608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1080:0,77,255:26,0 chr1 205138609 . G . PASS END=205138609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 205138610 . T . PASS END=205138617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1039:0,71,255:26,0 chr1 205138618 . A . PASS END=205138630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 205138631 . T . PASS END=205138631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 205138632 . T . PASS END=205138633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 205138634 . A . PASS END=205138634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 205138635 . G . PASS END=205138645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 205138646 . A . PASS END=205138647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 205138648 . G . PASS END=205138648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205138649 . A . PASS END=205138649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 205138650 . G . PASS END=205138722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:30:0,84,1260:0,86,255:38,0 chr1 205138723 . T . PASS END=205138723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1170:0,51,255:32,0 chr1 205138724 . C . PASS END=205138772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:39:0,95,1415:0,95,255:40,0 chr1 205138773 . A . PASS END=205138773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr1 205138774 . C . PASS END=205138846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1215:0,87,255:40,0 chr1 205138847 . T . PASS END=205138847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:26,0 chr1 205138848 . T . PASS END=205138848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 205138849 . C . PASS END=205138849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 205138850 . A . PASS END=205138850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 205138851 . T . PASS END=205138851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 205138852 . C . PASS END=205138949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:29:0,80,1155:0,80,255:38,0 chr1 205138950 . A . PASS END=205138960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 205140635 . C . PASS END=205140638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1407:0,96,255:40,0 chr1 205140639 . C . PASS END=205140639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1446:0,77,255:40,0 chr1 205140640 . A . PASS END=205140640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 205140641 . C . PASS END=205140641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1341:0,44,255:40,0 chr1 205140642 . A . PASS END=205140652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:80:44:0,80,1442:0,80,255:40,0 chr1 205140653 . C . PASS END=205140653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1535:0,74,255:40,0 chr1 205140654 . T . PASS END=205140675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:46:0,84,1340:0,84,255:40,0 chr1 205140676 . G . PASS END=205140676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1551:0,69,255:40,0 chr1 205140677 . T . PASS END=205140689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:95:47:0,95,1607:0,95,255:40,0 chr1 205156545 . C . PASS END=205156545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 205156546 . C . PASS END=205156547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:19,0 chr1 205156548 . G . PASS END=205156569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,640:0,60,255:23,0 chr1 205156570 . T . PASS END=205156570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:22,0 chr1 205156571 . A . PASS END=205156571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 205156572 . C . PASS END=205156572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 205156573 . C . PASS END=205156578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr1 205156579 . T . PASS END=205156580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 205156581 . C . PASS END=205156587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,986:0,65,255:26,0 chr1 205156588 . A . PASS END=205156591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 205156592 . T . PASS END=205156618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 205156619 . A . PASS END=205156621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 205156622 . T . PASS END=205156622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 205156623 . C . PASS END=205156635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,997:0,87,255:29,0 chr1 205156636 . A . PASS END=205156636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 205156637 . G . PASS END=205156654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:32,0 chr1 205156655 . C . PASS END=205156655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:31,0 chr1 205156656 . C . PASS END=205156760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1172:0,81,255:37,0 chr1 205156761 . T . PASS END=205156761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1072:0,44,255:27,0 chr1 205156762 . C . PASS END=205156778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 205156779 . T . PASS END=205156821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 205156822 . C . PASS END=205156825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 205156826 . C . PASS END=205156831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 205156832 . A . PASS END=205156832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 205156833 . C . PASS END=205156835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 205156836 . T . PASS END=205156837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 205156838 . C . PASS END=205156844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,772:0,69,255:23,0 chr1 205156845 . G . PASS END=205156845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:22,0 chr1 205156846 . G . PASS END=205156854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,819:0,69,255:25,0 chr1 205156855 . C . PASS END=205156855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 205156856 . A . PASS END=205156875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 205156876 . C . PASS END=205156876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 205156877 . A . PASS END=205156880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 205156881 . T . PASS END=205156881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 205156882 . C . PASS END=205156886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 205156887 . G . PASS END=205156897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 205156898 . T . PASS END=205156898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:18,0 chr1 205156899 . C . PASS END=205156900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205156901 . T . PASS END=205156901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205156902 . C . PASS END=205156902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr1 205156903 . C . PASS END=205156904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205156905 . T . PASS END=205156905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 205156906 . A . PASS END=205156909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 205156910 . G . PASS END=205156910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 205156911 . G . PASS END=205156920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 205156921 . G . PASS END=205156921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 205156922 . C . PASS END=205156926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 205156927 . C . PASS END=205156927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 205156928 . A . PASS END=205156934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 205180399 . C . PASS END=205180407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 205180408 . G . PASS END=205180408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 205180409 . C . PASS END=205180409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 205180410 . C . PASS END=205180472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr1 205180473 . A . PASS END=205180476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 205180477 . A . PASS END=205180477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 205180478 . A . PASS END=205180482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr1 205180483 . G . PASS END=205180491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 205180492 . A . PASS END=205180492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 205180493 . G . PASS END=205180511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,736:0,63,255:21,0 chr1 205180512 . A . PASS END=205180539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,46,255:17,0 chr1 205180540 . G . PASS END=205180540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 205180541 . C . PASS END=205180552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,613:0,51,255:17,0 chr1 205180553 . G . PASS END=205180554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 205180555 . A . PASS END=205180568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:17,0 chr1 205180569 . C . PASS END=205180569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 205180570 . C . PASS END=205180592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,599:0,41,255:17,0 chr1 205180593 . A . PASS END=205180593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 205180594 . T . PASS END=205180596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 205180597 . T . PASS END=205180597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 205180598 . T . PASS END=205180600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 205180601 . G . PASS END=205180601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 205180602 . C . PASS END=205180604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 205180605 . C . PASS END=205180605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 205180606 . C . PASS END=205180616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 205180617 . G . PASS END=205180662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,474:0,36,255:13,0 chr1 205180663 . T . PASS END=205180663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 205197693 . A . PASS END=205197696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 205197697 . A . PASS END=205197697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 205197698 . G . PASS END=205197716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:13,0 chr1 205197717 . C . PASS END=205197721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr1 205197722 . G . PASS END=205197722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 205197723 . C . PASS END=205197764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,559:0,41,255:19,0 chr1 205197765 . G . PASS END=205197772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr1 205197773 . C . PASS END=205197773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 205197774 . C . PASS END=205197801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 205197802 . A . PASS END=205197802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr1 205197803 . G . PASS END=205197806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,756:0,69,255:23,0 chr1 205197807 . A . PASS END=205197807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 205197808 . C . PASS END=205197829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,839:0,69,255:24,0 chr1 205197830 . G . PASS END=205197830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 205197831 . C . PASS END=205197832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205197833 . A . PASS END=205197833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 205197834 . A . PASS END=205197856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 205197857 . G . PASS END=205197857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 205197858 . G . PASS END=205197861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 205197862 . C . PASS END=205197871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 205197872 . T . PASS END=205197889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 205197890 . T . PASS END=205197899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 205210633 . A . PASS END=205210636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 205210637 . T . PASS END=205210637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 205210638 . C . PASS END=205210645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:23,0 chr1 205210646 . T . PASS END=205210646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 205210647 . G . PASS END=205210647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 205210648 . T . PASS END=205210648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 205210649 . C . PASS END=205210657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,909:0,62,255:26,0 chr1 205210658 . C . PASS END=205210667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr1 205210668 . C . PASS END=205210669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 205210670 . A . PASS END=205210671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 205210672 . G . PASS END=205210672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 205210673 . G . PASS END=205210685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1186:0,86,255:33,0 chr1 205210686 . G . PASS END=205210686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr1 205210687 . T . PASS END=205210710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:33,0 chr1 205210711 . G . PASS END=205210713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1011:0,76,255:26,0 chr1 205210714 . A . PASS END=205210715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 205210716 . G . PASS END=205210744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,917:0,64,255:26,0 chr1 205210745 . A . PASS END=205210745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 205210746 . G . PASS END=205210756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,917:0,72,255:25,0 chr1 205210757 . A . PASS END=205210757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 205210758 . G . PASS END=205210780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,70,255:26,0 chr1 205210781 . C . PASS END=205210784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205210785 . A . PASS END=205210812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr1 205210813 . C . PASS END=205210813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 205210814 . A . PASS END=205210821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 205210822 . T . PASS END=205210822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 205210823 . C . PASS END=205210828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 205210829 . C . PASS END=205210829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 205210830 . C . PASS END=205210831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:24,0 chr1 205210832 . T . PASS END=205210832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 205210833 . G . PASS END=205210839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,939:0,62,255:26,0 chr1 205210840 . C . PASS END=205210849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr1 205210850 . C . PASS END=205210850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 205210851 . C . PASS END=205210862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:29,0 chr1 205210863 . C . PASS END=205210863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 205210864 . G . PASS END=205210900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1094:0,90,255:30,0 chr1 205210901 . C . PASS END=205210905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 205210906 . A . PASS END=205210909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 205210910 . A . PASS END=205210911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 205210912 . C . PASS END=205210917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 205210918 . G . PASS END=205210923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 205210924 . C . PASS END=205210926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 205210927 . C . PASS END=205210928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 205210929 . C . PASS END=205210931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205210932 . C . PASS END=205210968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,931:0,71,255:25,0 chr1 205210969 . C . PASS END=205210969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 205210970 . G . PASS END=205210970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 205210971 . C . PASS END=205210971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr1 205210972 . A . PASS END=205210979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:24,0 chr1 205210980 . T . PASS END=205210989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:22:0,57,855:0,66,255:19,0 chr1 205210990 . G . PASS END=205210994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:20,0 chr1 205210995 . C . PASS END=205211044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,44,255:19,0 chr1 205211045 . T . PASS END=205211070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 205211071 . T . PASS END=205211071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:11,0 chr1 205211072 . G . PASS END=205211085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 205211086 . T . PASS END=205211088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr1 205211089 . T . PASS END=205211100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 205211101 . A . PASS END=205211122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,288:0,24,255:9,0 chr1 205211123 . G . PASS END=205211123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 205211124 . C . PASS END=205211128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 205211129 . A . PASS END=205211129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 205211130 . C . PASS END=205211130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 205211131 . G . PASS END=205211131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 205211132 . T . PASS END=205211168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 205211169 . C . PASS END=205211169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr1 205211170 . A . PASS END=205211172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 205215748 . A . PASS END=205215796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,96,255:40,0 chr1 205215797 . G . PASS END=205215814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 205215815 . C . PASS END=205215819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 205225518 . A . PASS END=205225544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,200,255:40,0 chr1 205226333 . A . PASS END=205226392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,620:0,48,255:19,0 chr1 205226393 . G . PASS END=205226395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 205226396 . T . PASS END=205226396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 205226397 . G . PASS END=205226403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 205226404 . C . PASS END=205226404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,1 chr1 205226405 . G . PASS END=205226405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:25:0,40,896:0,40,255:24,1 chr1 205226406 . G . PASS END=205226406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:25,0 chr1 205226407 . G . PASS END=205226450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,900:0,72,255:25,0 chr1 205226451 . G . PASS END=205226451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 205226452 . T . PASS END=205226486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:23,0 chr1 205226487 . C . PASS END=205226487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 205226488 . C . PASS END=205226489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205226490 . C . PASS END=205226494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,53,255:18,0 chr1 205238078 . G . PASS END=205238094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,653:0,51,255:19,0 chr1 205238095 . G . PASS END=205238129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 205238130 . C . PASS END=205238130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 205238131 . C . PASS END=205238133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205238134 . C . PASS END=205238144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,774:0,50,255:19,0 chr1 205238145 . G . PASS END=205238147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205238148 . T . PASS END=205238154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:18,0 chr1 205238155 . G . PASS END=205238163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,853:0,66,255:22,0 chr1 205238164 . G . PASS END=205238201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,54,255:19,0 chr1 205238202 . A . PASS END=205238203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 205238204 . C . PASS END=205238205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205238206 . G . PASS END=205238207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 205238208 . A . PASS END=205238227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,723:0,63,255:23,0 chr1 205238228 . A . PASS END=205238228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 205238229 . C . PASS END=205238229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 205238230 . C . PASS END=205238230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 205238231 . G . PASS END=205238233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,868:0,66,255:23,0 chr1 205238234 . C . PASS END=205238235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 205238236 . G . PASS END=205238244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:24,0 chr1 205238245 . T A, 50.00 PASS DP=27;MQ=250.00;MQRankSum=3.645;ReadPosRankSum=0.846;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,21,0:0.778,0.000:27:3,9,0:3,12,0:34:85,0,31,750,215,964:255,0,143:6,0:5.0002e+01,1.8386e-03,3.3838e+01,4.5000e+02,2.4936e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,12,9:3,3,14,7 chr1 205238246 . G . PASS END=205238253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,963:0,78,255:26,0 chr1 205238254 . G . PASS END=205238254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 205238255 . G . PASS END=205238255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 205238256 . C . PASS END=205238259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 205238260 . C . PASS END=205238260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 205238261 . G . PASS END=205238267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:28,0 chr1 205238268 . A . PASS END=205238269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 205238270 . G . PASS END=205238270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 205238271 . T . PASS END=205238271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 205238272 . G . PASS END=205238282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 205238283 . T . PASS END=205238341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:38,0 chr1 205238342 . A . PASS END=205238342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:33,0 chr1 205238343 . A . PASS END=205238369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1333:0,84,255:39,0 chr1 205238370 . T . PASS END=205238370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1379:0,70,255:35,0 chr1 205238371 . C . PASS END=205238371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 205238372 . G . PASS END=205238372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 205238373 . C . PASS END=205238386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1349:0,95,255:37,0 chr1 205238387 . A . PASS END=205238387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:31,0 chr1 205238388 . A . PASS END=205238424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1148:0,80,255:33,0 chr1 205238425 . G . PASS END=205238437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:24:0,68,1014:0,68,255:24,0 chr1 205238438 . T . PASS END=205238438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr1 205238439 . C . PASS END=205238439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 205238440 . G . PASS END=205238440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 205238441 . C . PASS END=205238443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 205238444 . C . PASS END=205238445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 205238446 . G . PASS END=205238446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:21,0 chr1 205238447 . C . PASS END=205238455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,62,255:22,0 chr1 205238456 . G . PASS END=205238456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 205238457 . T . PASS END=205238484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,64,255:25,0 chr1 205238485 . G . PASS END=205238485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 205238486 . G . PASS END=205238489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 205238490 . T . PASS END=205238505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,765:0,50,255:19,0 chr1 205238506 . C . PASS END=205238513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 205238514 . T . PASS END=205238514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 205238515 . C . PASS END=205238522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:23,0 chr1 205238523 . T . PASS END=205238523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 205238524 . T . PASS END=205238550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 205238551 . G . PASS END=205238558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 205238559 . T . PASS END=205238590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 205238591 . G . PASS END=205238593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205238594 . G . PASS END=205238613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,74,255:26,0 chr1 205238614 . T . PASS END=205238614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 205238615 . G . PASS END=205238618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 205238619 . G . PASS END=205238619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 205238620 . C . PASS END=205238635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,823:0,69,255:23,0 chr1 205238636 . T . PASS END=205238636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 205238637 . T . PASS END=205238660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,831:0,61,255:24,0 chr1 205238661 . A . PASS END=205238740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:15:0,45,582:0,45,255:19,0 chr1 205238741 . C . PASS END=205238741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 205238742 . C . PASS END=205238777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,660:0,54,255:19,0 chr1 205238778 . G . PASS END=205238782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 205238783 . A . PASS END=205238784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205238785 . C . PASS END=205238785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205238786 . T . PASS END=205238788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 205238789 . G . PASS END=205238796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 205238797 . A . PASS END=205238797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 205238798 . G . PASS END=205238808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 205238809 . T . PASS END=205238809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 205238810 . G . PASS END=205238837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:22,0 chr1 205238838 . G . PASS END=205238839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 205238840 . C . PASS END=205238842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205238843 . A . PASS END=205238851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 205238852 . G . PASS END=205238852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205238853 . C . PASS END=205238853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:18,0 chr1 205238854 . A . PASS END=205238891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,878:0,66,255:24,0 chr1 205238892 . A . PASS END=205238892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 205238893 . A . PASS END=205238899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,68,255:26,0 chr1 205238900 . C . PASS END=205238900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205238901 . G . PASS END=205238906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr1 205238907 . T . PASS END=205238924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,965:0,84,255:29,0 chr1 205238925 . A . PASS END=205238925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 205238926 . C . PASS END=205238960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr1 205238961 . T . PASS END=205238961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 205238962 . G . PASS END=205238965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205238966 . A . PASS END=205238985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,68,255:26,0 chr1 205238986 . C . PASS END=205238995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:19,0 chr1 205238996 . C . PASS END=205239012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,38,255:13,0 chr1 205240248 . G . PASS END=205240256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr1 205240257 . G . PASS END=205240267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 205240268 . A . PASS END=205240269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 205240270 . C . PASS END=205240272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205240273 . A . PASS END=205240277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 205240278 . C . PASS END=205240278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr1 205240279 . C . PASS END=205240279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 205240280 . T . PASS END=205240282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 205240283 . C . PASS END=205240283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 205240284 . T . PASS END=205240328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1056:0,87,255:30,0 chr1 205240329 . C . PASS END=205240338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 205240339 . G . PASS END=205240339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:23,0 chr1 205240340 . A . PASS END=205240351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:23,0 chr1 205240352 . A . PASS END=205240383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 205240924 . C . PASS END=205240924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 205240925 . C . PASS END=205240936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:31,0 chr1 205240937 . G . PASS END=205240937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 205240938 . C . PASS END=205240950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1172:0,86,255:35,0 chr1 205240951 . A . PASS END=205240980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1242:0,89,255:35,0 chr1 205240981 . A . PASS END=205240981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:32,0 chr1 205240982 . G . PASS END=205240999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1163:0,80,255:33,0 chr1 205241000 . G . PASS END=205241000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:26,0 chr1 205241001 . C . PASS END=205241027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1208:0,83,255:31,0 chr1 205241028 . A . PASS END=205241028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:28,0 chr1 205241029 . A . PASS END=205241039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1192:0,83,255:31,0 chr1 205241040 . C . PASS END=205241043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 205241044 . C . PASS END=205241051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 205241052 . G . PASS END=205241056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 205241057 . G . PASS END=205241057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205241058 . T . PASS END=205241058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 205241059 . T . PASS END=205241064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:28,0 chr1 205241065 . A . PASS END=205241065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr1 205241066 . C . PASS END=205241081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:30,0 chr1 205241082 . A . PASS END=205241092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 205241093 . G . PASS END=205241121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:29,0 chr1 205241122 . T . PASS END=205241126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr1 205241127 . A . PASS END=205241128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 205241129 . G . PASS END=205241131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 205241132 . C . PASS END=205241134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 205241135 . C . PASS END=205241135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 205241136 . A . PASS END=205241136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr1 205241137 . T . PASS END=205241158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,96,255:36,0 chr1 205241159 . C . PASS END=205241159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:33,0 chr1 205241160 . A . PASS END=205241168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1294:0,81,255:33,0 chr1 205241169 . C T, 42.44 PASS DP=37;MQ=250.00;MQRankSum=4.947;ReadPosRankSum=2.370;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,13,0:0.351,0.000:37:14,7,0:10,6,0:42:77,0,50,428,844,1272:255,0,255:20,0:4.2437e+01,2.6948e-04,5.3000e+01,4.2808e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,5,8:12,12,7,6 chr1 205241170 . T . PASS END=205241206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1166:0,83,255:33,0 chr1 205241207 . G . PASS END=205241208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 205241209 . A . PASS END=205241210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:31:0,60,1039:0,60,255:29,0 chr1 205241211 . T . PASS END=205241225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 205241226 . C . PASS END=205241242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 205241243 . G . PASS END=205241243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:20,0 chr1 205241244 . C . PASS END=205241252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 205272578 . T . PASS END=205272585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 205272586 . G . PASS END=205272597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr1 205272598 . C . PASS END=205272701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:25,0 chr1 205272702 . G . PASS END=205272740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 205272741 . T . PASS END=205272744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 205272745 . C . PASS END=205272745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 205272746 . A . PASS END=205272746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 205272747 . G . PASS END=205272778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 205272779 . C . PASS END=205272780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 205272781 . G . PASS END=205272819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 205272820 . G . PASS END=205272861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 205272862 . G . PASS END=205272862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 205272863 . G . PASS END=205272872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr1 205272873 . C . PASS END=205272873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,394:0,9,255:11,0 chr1 205272874 . G . PASS END=205272874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205272875 . A . PASS END=205272875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:12,0 chr1 205272876 . G . PASS END=205272876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 205272877 . G . PASS END=205272878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205272879 . G . PASS END=205272880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 205272881 . G . PASS END=205272891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 205272892 . C . PASS END=205272892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:14,0 chr1 205272893 . C . PASS END=205272894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 205272895 . G . PASS END=205272895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 205272896 . G . PASS END=205272896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:15,0 chr1 205272897 . G . PASS END=205272897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr1 205272898 . A . PASS END=205272898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:17,0 chr1 205272899 . G . PASS END=205272901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 205272902 . G . PASS END=205272904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 205272905 . G . PASS END=205272905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 205272906 . G . PASS END=205272906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 205272907 . T . PASS END=205272907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 205272908 . G . PASS END=205272912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 205272913 . G . PASS END=205272913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 205272914 . G . PASS END=205272914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205272915 . G . PASS END=205272916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 205272917 . C . PASS END=205272917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205272918 . G A, 48.92 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=1.386;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,9,0:0.429,0.000:21:7,5,0:5,4,0:47:84,0,50,293,429,722:255,0,255:12,0:4.8922e+01,7.7400e-05,5.3000e+01,2.9307e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,5,4:7,5,7,2 chr1 205272919 . C . PASS END=205272919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205272920 . G . PASS END=205272920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 205272921 . A . PASS END=205272928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 205272929 . G . PASS END=205272930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 205272931 . C . PASS END=205272947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,848:0,75,255:25,0 chr1 205272948 . C . PASS END=205272948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 205272949 . C . PASS END=205272955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:26,0 chr1 205272956 . T . PASS END=205272958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 205272959 . G . PASS END=205272968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 205272969 . T . PASS END=205272969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,945:0,37,255:26,0 chr1 205272970 . T . PASS END=205272970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr1 205272971 . G . PASS END=205272982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr1 205272983 . C . PASS END=205273002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 205273003 . G . PASS END=205273003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 205273004 . C . PASS END=205273017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 205273018 . G . PASS END=205273018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 205273019 . A . PASS END=205273044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,902:0,72,255:25,0 chr1 205273045 . C . PASS END=205273045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 205273046 . G . PASS END=205273052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 205273053 . A . PASS END=205273053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 205273054 . G . PASS END=205273054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 205273055 . C . PASS END=205273055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 205273056 . T . PASS END=205273058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:22,0 chr1 205273059 . C . PASS END=205273059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 205273060 . C . PASS END=205273060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 205273061 . A . PASS END=205273061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 205273062 . G . PASS END=205273062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 205273063 . A . PASS END=205273063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 205273064 . T . PASS END=205273068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 205273069 . T . PASS END=205273069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 205273070 . G . PASS END=205273070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 205273071 . G . PASS END=205273076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 205273077 . G . PASS END=205273079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 205273080 . G . PASS END=205273089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 205273090 . A . PASS END=205273100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:22,0 chr1 205273101 . C . PASS END=205273168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,552:0,48,255:19,0 chr1 205273169 . G . PASS END=205273176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 205273177 . T . PASS END=205273211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 205273212 . G . PASS END=205273212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 205273213 . A . PASS END=205273225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,629:0,48,255:19,0 chr1 205273226 . C . PASS END=205273227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 205273228 . T . PASS END=205273228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:19,0 chr1 205273229 . C . PASS END=205273231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 205273232 . G . PASS END=205273232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 205273233 . A . PASS END=205273238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,663:0,63,255:21,0 chr1 205273239 . C . PASS END=205273239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 205273240 . C . PASS END=205273241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 205273242 . T . PASS END=205273242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:20,0 chr1 205273243 . T . PASS END=205273243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 205273244 . T . PASS END=205273245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 205273246 . G . PASS END=205273251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 205273252 . T . PASS END=205273252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 205273253 . G . PASS END=205273307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,886:0,61,255:26,0 chr1 205273308 . G . PASS END=205273308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 205273309 . A . PASS END=205273309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,902:0,70,255:27,0 chr1 205273310 . C . PASS END=205273361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1177:0,80,255:32,0 chr1 205273362 . A . PASS END=205273371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 205273372 . T . PASS END=205273372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr1 205273373 . G . PASS END=205273404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 205273405 . A . PASS END=205273409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 205273410 . C . PASS END=205273419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 205273420 . T . PASS END=205273420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 205273421 . G . PASS END=205273432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 205273433 . C . PASS END=205273433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 205273434 . A . PASS END=205273446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,837:0,69,255:24,0 chr1 205273447 . A . PASS END=205273447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 205273448 . G . PASS END=205273456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 205273457 . G . PASS END=205273458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 205273459 . G . PASS END=205273467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 205273468 . C . PASS END=205273468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 205273469 . C . PASS END=205273476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 205273477 . C . PASS END=205273477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 205273478 . G . PASS END=205273487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 205273488 . T . PASS END=205273576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,609:0,48,255:19,0 chr1 205273577 . A . PASS END=205273604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,449:0,33,255:12,0 chr1 205273605 . T . PASS END=205273611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 205273612 . T . PASS END=205273617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr1 205273618 . G . PASS END=205273620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 205273621 . A . PASS END=205273641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 205274327 . C . PASS END=205274343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,566:0,45,255:18,0 chr1 205274344 . T . PASS END=205274344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 205274345 . C . PASS END=205274348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:19,0 chr1 205274349 . G . PASS END=205274364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 205274365 . A . PASS END=205274365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr1 205274366 . T . PASS END=205274366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205274367 . C . PASS END=205274367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 205274368 . T . PASS END=205274405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,747:0,60,255:21,0 chr1 205274406 . C . PASS END=205274406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 205274407 . A . PASS END=205274407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 205274408 . T . PASS END=205274435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,714:0,44,255:19,0 chr1 205274436 . A . PASS END=205274436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 205274437 . A . PASS END=205274440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 205274441 . C . PASS END=205274441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 205274442 . C . PASS END=205274442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:12,0 chr1 205274443 . A . PASS END=205274448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 205274449 . C . PASS END=205274449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr1 205274450 . A . PASS END=205274455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 205274456 . C . PASS END=205274459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 205275316 . C . PASS END=205275325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 205275326 . G . PASS END=205275383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:37:0,87,1367:0,87,255:40,0 chr1 205275384 . T . PASS END=205275420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,99,1455:0,99,255:40,0 chr1 205275421 . A G, 158.36 PASS DP=38;MQ=250.00;FractionInformativeReads=0.974 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,18,0:0,19,0:108:196,111,0,1424,111,1424:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,16:0,0,16,21 chr1 205275422 . C . PASS END=205275435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:37,0 chr1 205277293 . C . PASS END=205277358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,103,1738:0,103,255:40,0 chr1 205277709 . C . PASS END=205277719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:25,0 chr1 205277720 . A . PASS END=205277720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 205277721 . G . PASS END=205277721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 205277722 . T . PASS END=205277722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 205277723 . G . PASS END=205277727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:26,0 chr1 205277728 . G . PASS END=205277743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:28,0 chr1 205277744 . G . PASS END=205277745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 205277746 . A . PASS END=205277746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:27,0 chr1 205277747 . A . PASS END=205277750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,934:0,84,255:29,0 chr1 205277751 . A . PASS END=205277751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 205277752 . T . PASS END=205277759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr1 205277760 . T . PASS END=205277760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 205277761 . T . PASS END=205277780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:35,0 chr1 205277781 . C T, 50.00 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=2.228;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,18,0:0.514,0.000:35:6,11,0:11,7,0:48:85,0,50,633,608,1240:255,0,255:17,0:5.0000e+01,6.5492e-05,5.2936e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,11,7:8,9,10,8 chr1 205277782 . C . PASS END=205277818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,101,1345:0,101,255:40,0 chr1 205277819 . C . PASS END=205277821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,101,255:34,0 chr1 205277822 . A . PASS END=205277822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:31,0 chr1 205277823 . C . PASS END=205277845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1057:0,82,255:33,0 chr1 205277846 . T . PASS END=205277855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:32,0 chr1 205277856 . A . PASS END=205277860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:24,0 chr1 205280833 . C . PASS END=205280953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:37:0,95,1305:0,95,255:40,0 chr1 205290526 . C . PASS END=205290530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 205290531 . G . PASS END=205290531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:14,0 chr1 205290532 . C . PASS END=205290554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,643:0,40,255:19,0 chr1 205290555 . T . PASS END=205290559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205290560 . T . PASS END=205290560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 205290561 . T . PASS END=205290564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 205290565 . G . PASS END=205290565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 205290566 . T . PASS END=205290574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr1 205290575 . T . PASS END=205290575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 205290576 . T . PASS END=205290604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,939:0,64,255:26,0 chr1 205290605 . T . PASS END=205290605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 205290606 . G . PASS END=205290654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,842:0,61,255:26,0 chr1 205290655 . T . PASS END=205290655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 205290656 . A . PASS END=205290660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 205290661 . C . PASS END=205290662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:20,0 chr1 205290663 . T . PASS END=205290665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 205290666 . G . PASS END=205290667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 205290668 . G . PASS END=205290671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 205290672 . T . PASS END=205290672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:20,0 chr1 205290673 . G . PASS END=205290673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,725:0,19,255:20,0 chr1 205290674 . A . PASS END=205290674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,812:0,20,255:20,0 chr1 205290675 . T . PASS END=205290676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:21,0 chr1 205290677 . A . PASS END=205290677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205290678 . G . PASS END=205290678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 205290679 . C . PASS END=205290688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,784:0,66,255:22,0 chr1 205290689 . A . PASS END=205290689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 205290690 . G . PASS END=205290694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 205290695 . C . PASS END=205290695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:19,0 chr1 205290696 . G . PASS END=205290697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205290698 . G . PASS END=205290698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 205290699 . C . PASS END=205290699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205290700 . T . PASS END=205290700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,662:0,36,255:18,0 chr1 205290701 . A . PASS END=205290707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:20,0 chr1 205290708 . C . PASS END=205290708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:19,0 chr1 205290709 . G . PASS END=205290712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 205290713 . G . PASS END=205290713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 205290714 . A . PASS END=205290714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,557:0,24,255:19,0 chr1 205290715 . G . PASS END=205290716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205290717 . G . PASS END=205290717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr1 205290718 . A . PASS END=205290718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:19,0 chr1 205290719 . G . PASS END=205290720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 205290721 . G . PASS END=205290725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 205290726 . C . PASS END=205290726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,676:0,32,255:18,0 chr1 205290727 . G . PASS END=205290732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 205290733 . C . PASS END=205290733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 205290734 . C . PASS END=205290734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,621:0,43,255:19,0 chr1 205290735 . G . PASS END=205290736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 205290737 . G . PASS END=205290737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 205290738 . C . PASS END=205290738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 205290739 . G . PASS END=205290739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,529:0,27,255:18,0 chr1 205290740 . A . PASS END=205290740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 205290741 . A . PASS END=205290741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 205290742 . A . PASS END=205290745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,654:0,60,255:20,0 chr1 205290746 . A . PASS END=205290746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr1 205290747 . G . PASS END=205290747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 205290748 . C . PASS END=205290753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 205290754 . C . PASS END=205290754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr1 205290755 . A . PASS END=205290756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 205290757 . G . PASS END=205290782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:18,0 chr1 205290783 . C . PASS END=205290783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 205290784 . A . PASS END=205290784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 205290785 . G . PASS END=205290789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 205290790 . A . PASS END=205290790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 205290791 . T . PASS END=205290793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 205290794 . G A, 101.17 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,8,0:0,10,0:51:139,54,0,689,54,689:255,54,0:0,0:1.0117e+02,5.1172e+01,3.3134e-05,4.5000e+02,8.5942e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,13:0,0,9,9 chr1 205290795 . T . PASS END=205290798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 205290799 . C . PASS END=205290817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 205290818 . G . PASS END=205290822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 205290823 . G . PASS END=205290825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 205290826 . C . PASS END=205290826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 205290827 . A . PASS END=205290831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 205290832 . T . PASS END=205290835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 205290836 . G . PASS END=205290836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 205290837 . C . PASS END=205290842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 205290843 . G . PASS END=205290848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 205290849 . G . PASS END=205290855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 205290856 . A . PASS END=205290856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 205290857 . G . PASS END=205290871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 205290872 . G . PASS END=205290888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:6:0,10,210:0,10,210:6,0 chr1 205306527 . C . PASS END=205306556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,545:0,48,255:19,0 chr1 205306557 . T . PASS END=205306573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 205306574 . G . PASS END=205306574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 205306575 . G . PASS END=205306617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:23,0 chr1 205306618 . C . PASS END=205306618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 205306619 . T . PASS END=205306634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 205306635 . G . PASS END=205306695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 205306696 . G . PASS END=205306708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 205306709 . T . PASS END=205306720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,319:0,27,255:9,0 chr1 205307623 . C . PASS END=205307632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,537:0,42,255:16,0 chr1 205307633 . A . PASS END=205307633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 205307634 . G . PASS END=205307636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr1 205307637 . A . PASS END=205307639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 205307640 . A . PASS END=205307640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 205307641 . T . PASS END=205307641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 205307642 . G . PASS END=205307642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 205307643 . A . PASS END=205307681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,729:0,60,255:25,0 chr1 205307682 . C . PASS END=205307683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 205307684 . C . PASS END=205307685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205307686 . T . PASS END=205307686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:19,0 chr1 205307687 . C . PASS END=205307688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205307689 . T . PASS END=205307704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,599:0,43,255:19,0 chr1 205307705 . T . PASS END=205307717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,681:0,41,255:18,0 chr1 205307718 . C . PASS END=205307719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 205307720 . T . PASS END=205307724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 205308322 . C . PASS END=205308332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,884:0,63,255:24,0 chr1 205308333 . T . PASS END=205308333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 205308334 . C . PASS END=205308334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 205308335 . G A, 119.22 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,12,0:0,12,0:69:157,72,0,257,257,257:255,72,0:0,0:1.1922e+02,6.9222e+01,5.1772e-07,2.5399e+02,2.8876e+02,2.5700e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,7:0,0,15,9 chr1 205308336 . A . PASS END=205308336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 205308337 . A . PASS END=205308339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,834:0,75,255:25,0 chr1 205308340 . C . PASS END=205308346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1072:0,84,255:29,0 chr1 205308347 . C A, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.427;ReadPosRankSum=1.056;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,18,0:0.621,0.000:29:5,9,0:6,9,0:47:85,0,46,636,385,1021:255,0,255:11,0:5.0000e+01,9.4485e-05,4.9295e+01,4.5000e+02,4.2026e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,3,13,5:6,5,12,6 chr1 205308348 . G . PASS END=205308367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,1113:0,85,255:35,0 chr1 205308368 . C T, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,21,0:0,16,0:108:196,111,0,1427,111,1427:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,13:0,0,22,15 chr1 205308369 . C . PASS END=205308378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1357:0,108,255:36,0 chr1 205308379 . G . PASS END=205308379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr1 205308380 . A . PASS END=205308405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,99,1343:0,104,255:39,0 chr1 205308406 . A . PASS END=205308516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,91,255:40,0 chr1 205308517 . C . PASS END=205308517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:26,0 chr1 205308518 . G . PASS END=205308518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 205308519 . T . PASS END=205308532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:26,0 chr1 205308533 . T . PASS END=205308533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,866:0,59,255:20,0 chr1 205308534 . C . PASS END=205308537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 205308772 . C . PASS END=205308777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 205308778 . C . PASS END=205308778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr1 205308779 . G . PASS END=205308782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 205308783 . A . PASS END=205308783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,954:0,57,255:27,0 chr1 205308784 . T . PASS END=205308789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1164:0,96,255:32,0 chr1 205308790 . A . PASS END=205308790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:29,0 chr1 205308791 . G . PASS END=205308896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1180:0,83,255:40,0 chr1 205308897 . A . PASS END=205308897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 205308898 . G . PASS END=205308898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 205308899 . G . PASS END=205308928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 205308929 . T . PASS END=205308936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 205312357 . C . PASS END=205312357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 205312358 . T . PASS END=205312358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 205312359 . T . PASS END=205312389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,352:0,33,255:13,0 chr1 205312390 . C . PASS END=205312427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,537:0,45,255:19,0 chr1 205312428 . A . PASS END=205312430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 205312431 . T . PASS END=205312431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205312432 . T . PASS END=205312443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 205312444 . C . PASS END=205312480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,552:0,48,255:19,0 chr1 205312481 . A . PASS END=205312502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 205312503 . A . PASS END=205312503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 205312504 . G . PASS END=205312510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 205312511 . G . PASS END=205312516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 205312517 . C . LowGQ END=205312517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:8,0 chr1 205312518 . A . PASS END=205312525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 205312526 . C . PASS END=205312532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 205312533 . G . PASS END=205312540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 205312541 . C . PASS END=205312541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 205312542 . C . PASS END=205312542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,1 chr1 205312543 . G . PASS END=205312543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:10:15:0,10,486:0,10,255:13,1 chr1 205312544 . G . PASS END=205312544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 205312545 . G . PASS END=205312589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 205312590 . C . PASS END=205312594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 205312595 . C . PASS END=205312616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr1 205312617 . C . PASS END=205312617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 205312618 . A . PASS END=205312619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 205312620 . C . PASS END=205312626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 205312627 . T . PASS END=205312662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,662:0,54,255:19,0 chr1 205312663 . A . PASS END=205312663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 205312664 . G . PASS END=205312672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 205312673 . G . PASS END=205312680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 205312681 . G . PASS END=205312682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 205312683 . A . PASS END=205312683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 205312684 . G . PASS END=205312706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 205312707 . A . PASS END=205312732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,352:0,33,255:13,0 chr1 205350786 . T . PASS END=205350981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:90:37:0,90,1350:0,90,255:40,0 chr1 205350982 . C . PASS END=205350984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 205353416 . C . PASS END=205353492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,99,1415:0,99,255:40,0 chr1 205358579 . C . PASS END=205358593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,107,1504:0,107,255:40,0 chr1 205358594 . T C,G, 164.38 PASS DP=41;MQ=250.00;FractionInformativeReads=0.976 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,1,0:0.975,0.025,0.000:40:0,23,1,0:0,16,0,0:114:202,117,0,1490,110,195,1504,117,1490,1504:255,123,0:0,0:1.6438e+02,1.1438e+02,0.0000e+00,4.5000e+02,1.4217e+02,1.9517e+02,4.5000e+02,1.4915e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,13,27:0,0,19,21 chr1 205358595 . T . PASS END=205358619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1438:0,107,255:40,0 chr1 205358704 . C . PASS END=205358714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr1 205358715 . G A, 49.94 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=3.119;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:10,7,0:8,10,0:48:85,0,50,608,644,1252:255,0,255:15,0:4.9936e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,12,7,10:6,12,5,12 chr1 205358716 . A . PASS END=205358740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,92,255:34,0 chr1 205358741 . T C, 49.73 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=3.021;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,15,0:0.469,0.000:32:5,9,0:12,6,0:48:85,0,50,534,608,1142:255,0,255:16,0:4.9731e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,7,8:5,12,7,8 chr1 205358742 . G . PASS END=205358752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 205358753 . A . PASS END=205358753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:28,0 chr1 205358754 . T . PASS END=205358767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 205358768 . A . PASS END=205358769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,83,255:26,0 chr1 205364240 . T . PASS END=205364286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:96:0,120,1800:0,245,255:40,1 chr1 205367047 . C . PASS END=205367130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:51:0,120,1800:0,129,255:40,0 chr1 205385360 . T . PASS END=205385424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:87:0,120,1800:0,245,255:40,0 chr1 205388358 . C . PASS END=205388362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205388363 . C . PASS END=205388381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:25,0 chr1 205388382 . C . PASS END=205388392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 205388393 . T . PASS END=205388393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,854:0,61,255:25,0 chr1 205388394 . C . PASS END=205388429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1031:0,84,255:30,0 chr1 205388430 . G . PASS END=205388446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 205388447 . A . PASS END=205388447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 205388448 . C . PASS END=205388465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 205388466 . A . PASS END=205388480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 205389583 . G . PASS END=205389664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,108,1621:0,108,255:40,0 chr1 205410053 . T . PASS END=205410060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 205410061 . C . PASS END=205410118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:25,0 chr1 205410119 . G . PASS END=205410120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 205410121 . G . PASS END=205410126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205410127 . A . PASS END=205410154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 205481362 . A . PASS END=205481518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:42:0,87,1305:0,122,255:40,0 chr1 205481519 . C . PASS END=205481521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr1 205481522 . G . PASS END=205481523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,126,255:27,0 chr1 205481524 . A . PASS END=205481535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,81,255:25,0 chr1 205481536 . G . PASS END=205481544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr1 205492275 . G . PASS END=205492429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:40:0,93,1476:0,93,255:40,0 chr1 205492430 . G . PASS END=205492430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1297:0,79,255:36,0 chr1 205492431 . G . LowGQ END=205492431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:0:44:0,0,1231:4,0,255:33,0 chr1 205492432 . G . PASS END=205492504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:33:0,80,1192:0,80,255:39,0 chr1 205492505 . T . PASS END=205492505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1088:0,52,255:25,0 chr1 205492506 . C . PASS END=205492506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 205492507 . C . PASS END=205492508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 205492509 . C . PASS END=205492509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 205492510 . A . PASS END=205492510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1050:0,71,255:28,0 chr1 205492511 . C . PASS END=205492511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:26,0 chr1 205492512 . T . PASS END=205492513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:34:0,69,1094:0,69,255:25,0 chr1 205492514 . G . PASS END=205492516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,88,255:28,0 chr1 205492517 . T . PASS END=205492517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,987:0,49,255:27,0 chr1 205492518 . T . PASS END=205492519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:28,0 chr1 205492520 . G . PASS END=205492520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:27,0 chr1 205492611 . A . PASS END=205492611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr1 205492612 . C . PASS END=205492618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 205492619 . C . PASS END=205492619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr1 205492620 . T . PASS END=205492625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,848:0,69,255:26,0 chr1 205492626 . C . PASS END=205492630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,883:0,81,255:28,0 chr1 205492631 . G . PASS END=205492631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 205492632 . G . PASS END=205492661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,959:0,82,255:33,0 chr1 205492662 . T . PASS END=205492662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1144:0,66,255:32,0 chr1 205492663 . C . PASS END=205492685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1133:0,82,255:33,0 chr1 205492686 . A . PASS END=205492686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 205492687 . G . PASS END=205492687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 205492688 . C . PASS END=205492688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 205492689 . C . PASS END=205492698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr1 205492699 . C . PASS END=205492699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 205492700 . T . PASS END=205492703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1177:0,80,255:29,0 chr1 205492704 . C . PASS END=205492718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,953:0,65,255:26,0 chr1 205492719 . A . PASS END=205492720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 205492721 . C . PASS END=205492727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 205492728 . A . PASS END=205492732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 205492733 . C . PASS END=205492734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205492735 . G . PASS END=205492755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr1 205492756 . A G, 128.26 PASS DP=27;MQ=246.72;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,15,0:0,12,0:78:166,81,0,1047,81,1047:255,81,0:0,0:1.2826e+02,7.8263e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,16:0,0,15,12 chr1 205492757 . A . PASS END=205492760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 205492761 . C . PASS END=205492761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 205492762 . C . PASS END=205492774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 205492775 . C . PASS END=205492775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 205492776 . C . PASS END=205492787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 205492788 . C . PASS END=205492788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 205492789 . A . PASS END=205492791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 205492792 . A . PASS END=205492792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 205492793 . T . PASS END=205492793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205492794 . G . PASS END=205492795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205492796 . A . PASS END=205492799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:16,0 chr1 205492800 . A . PASS END=205492800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 205492801 . C . PASS END=205492803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:21:0,42,630:0,47,255:14,0 chr1 205492804 . G . PASS END=205492829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,421:0,36,255:12,0 chr1 205492830 . T . PASS END=205492843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 205493360 . G . PASS END=205493368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:30,0 chr1 205493369 . A . PASS END=205493369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 205493370 . A . PASS END=205493371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 205493372 . A . PASS END=205493372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 205493373 . G . PASS END=205493374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 205493375 . C . PASS END=205493375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:28,0 chr1 205493376 . T . PASS END=205493449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1174:0,89,255:35,0 chr1 205493450 . A . PASS END=205493465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:25,0 chr1 205493466 . T . PASS END=205493472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 205493473 . C . PASS END=205493477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 205493478 . C . PASS END=205493485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr1 205494267 . T . PASS END=205494323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,143,255:40,0 chr1 205495193 . G . PASS END=205495196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:25,0 chr1 205495197 . C . PASS END=205495307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1055:0,84,255:40,0 chr1 205495495 . T . PASS END=205495589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1260:0,86,255:40,0 chr1 205495903 . G . PASS END=205495938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,104,1443:0,104,255:40,0 chr1 205495939 . A . PASS END=205495965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1439:0,93,255:40,0 chr1 205496922 . A . PASS END=205496922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 205496923 . T . PASS END=205496923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:20,0 chr1 205496924 . T . PASS END=205496924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 205496925 . T . PASS END=205496925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 205496926 . T . PASS END=205496926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 205496927 . C . PASS END=205496932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 205496933 . C . PASS END=205496933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 205496934 . C . PASS END=205496936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 205496937 . C . PASS END=205496939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 205496940 . C . PASS END=205496940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 205496941 . T . PASS END=205496941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 205496942 . C . PASS END=205496950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,939:0,75,255:26,0 chr1 205496951 . C . PASS END=205496961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1042:0,87,255:30,0 chr1 205496962 . A . PASS END=205496962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr1 205496963 . C . PASS END=205496963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 205496964 . C . PASS END=205496967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 205496968 . G . PASS END=205496968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 205496969 . C . PASS END=205496979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1196:0,85,255:32,0 chr1 205496980 . A . PASS END=205496980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 205496981 . C . PASS END=205497012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1089:0,82,255:33,0 chr1 205497013 . A . PASS END=205497013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,906:0,76,255:27,0 chr1 205497014 . C . PASS END=205497017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 205497018 . A . PASS END=205497018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:27,2 chr1 205497019 . G . PASS END=205497019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,986:0,24,255:27,2 chr1 205497020 . G . PASS END=205497020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 205497021 . G . PASS END=205497028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205497029 . G . PASS END=205497030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 205497031 . A . PASS END=205497045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1000:0,70,255:26,0 chr1 205497176 . G . PASS END=205497203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr1 205497204 . A . PASS END=205497206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 205497207 . G . PASS END=205497207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 205497208 . A . PASS END=205497228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 205497229 . A . PASS END=205497229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 205497230 . C . PASS END=205497270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:24,0 chr1 205497271 . G . PASS END=205497291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 205497292 . A . PASS END=205497292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 205497293 . T . PASS END=205497296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 205498127 . G . PASS END=205498127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 205498128 . G . PASS END=205498135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205498136 . C . PASS END=205498136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 205498137 . T . PASS END=205498155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:23,0 chr1 205498156 . C . PASS END=205498156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 205498157 . C . PASS END=205498161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 205498162 . G . PASS END=205498162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 205498163 . G . PASS END=205498180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr1 205498181 . C . PASS END=205498181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 205498182 . T . PASS END=205498193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,864:0,72,255:24,0 chr1 205498194 . G . PASS END=205498224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:21,0 chr1 205498452 . G . PASS END=205498455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 205498456 . C . PASS END=205498462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 205498463 . G . PASS END=205498463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 205498464 . A . PASS END=205498465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 205498466 . G . PASS END=205498467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,690:0,44,255:20,0 chr1 205498468 . G . PASS END=205498477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:25,0 chr1 205498478 . G . PASS END=205498478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 205498479 . G . PASS END=205498479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 205498480 . C . PASS END=205498480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 205498481 . G . PASS END=205498492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,969:0,65,255:26,0 chr1 205498493 . T . PASS END=205498495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 205498496 . G . PASS END=205498497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 205498498 . G . PASS END=205498501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205498502 . C . PASS END=205498506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 205498507 . C . PASS END=205498507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205498508 . T . PASS END=205498509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 205498510 . C . PASS END=205498510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205498511 . A . PASS END=205498518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 205498519 . C . PASS END=205498523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 205498524 . A . PASS END=205498550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:21:0,62,770:0,62,255:26,0 chr1 205498551 . C . PASS END=205498557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,737:0,47,255:19,0 chr1 205498649 . G . PASS END=205498651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205498652 . G . PASS END=205498668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 205498669 . A . PASS END=205498691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 205499387 . T . PASS END=205499392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:34,0 chr1 205499393 . T . PASS END=205499457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1277:0,95,255:40,0 chr1 205499458 . T . PASS END=205499477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr1 205499756 . C . PASS END=205499767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1092:0,84,255:30,0 chr1 205499768 . T . PASS END=205499768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:28,0 chr1 205499769 . C . PASS END=205499777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 205499778 . G . PASS END=205499778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 205499779 . G . PASS END=205499785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 205499786 . A . PASS END=205499786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:28,0 chr1 205499787 . G . PASS END=205499788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 205499789 . T . PASS END=205499789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 205499790 . C . PASS END=205499800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 205499801 . C . PASS END=205499821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:22:0,60,900:0,66,255:24,0 chr1 205499822 . T . PASS END=205499822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 205499823 . C . PASS END=205499826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 205499827 . C . PASS END=205499827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 205499828 . A . PASS END=205499829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205499830 . C . PASS END=205499833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 205500472 . G . PASS END=205500474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 205500475 . G . PASS END=205500478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,992:0,68,255:27,0 chr1 205500479 . G . PASS END=205500483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 205500484 . A . PASS END=205500484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 205500485 . C . PASS END=205500486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 205500487 . G . PASS END=205500488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1045:0,71,255:26,0 chr1 205500489 . C . PASS END=205500492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205500493 . A . PASS END=205500506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,67,255:26,0 chr1 205538198 . A . PASS END=205538221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr1 205538222 . G . PASS END=205538255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 205538256 . C . PASS END=205538260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 205538261 . T . PASS END=205538261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 205538262 . G . PASS END=205538294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:11,0 chr1 205538295 . C . PASS END=205538298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 205538299 . C . PASS END=205538299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 205538300 . C . PASS END=205538314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 205538315 . C . PASS END=205538329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 205538330 . C . PASS END=205538342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr1 205538343 . C . PASS END=205538381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,227:9,0 chr1 205538382 . T . PASS END=205538400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,155:0,12,155:6,0 chr1 205538401 . C . PASS END=205538427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr1 205548814 . A . PASS END=205548829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,401:0,42,255:15,0 chr1 205548830 . A . PASS END=205548830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr1 205548831 . G . PASS END=205548833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 205548834 . G . PASS END=205548834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 205548835 . A . PASS END=205548850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,568:0,41,255:19,0 chr1 205548851 . C . PASS END=205548851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205548852 . C . PASS END=205548854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 205548855 . T . PASS END=205548855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,662:0,32,255:19,0 chr1 205548856 . G . PASS END=205548856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:19,0 chr1 205548857 . A . PASS END=205548857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 205548858 . C . PASS END=205548858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,615:0,19,255:19,0 chr1 205548859 . A . PASS END=205548859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:21,0 chr1 205548860 . T . PASS END=205548861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:20,0 chr1 205548862 . A . PASS END=205548862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 205548863 . C . PASS END=205548863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,749:0,25,255:21,0 chr1 205548864 . C . PASS END=205548864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:23,0 chr1 205548865 . C . PASS END=205548865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:16:24:0,16,678:0,16,255:22,0 chr1 205548866 . T . PASS END=205548866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 205548867 . T . PASS END=205548867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:22,0 chr1 205548868 . C . PASS END=205548869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 205548870 . C . PASS END=205548871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 205548872 . C . PASS END=205548874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 205548875 . G . PASS END=205548875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 205548876 . C . PASS END=205548876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 205548877 . A . PASS END=205548878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 205548879 . C . PASS END=205548879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 205548880 . C . PASS END=205548882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 205548883 . G . PASS END=205548885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,882:0,72,255:24,0 chr1 205548886 . C . PASS END=205548886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr1 205548887 . A . PASS END=205548887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 205548888 . G . PASS END=205548888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr1 205548889 . T . PASS END=205548889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:20,0 chr1 205548890 . C . PASS END=205548892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 205548893 . T . PASS END=205548893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:24,0 chr1 205548894 . A . PASS END=205548898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 205548899 . C . PASS END=205548903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 205548904 . T . PASS END=205548913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 205548914 . C . PASS END=205548916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205548917 . T . PASS END=205549000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,898:0,62,255:26,0 chr1 205549001 . C . PASS END=205549004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 205549005 . G . PASS END=205549009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr1 205549010 . G . PASS END=205549012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,845:0,56,255:19,0 chr1 205549013 . T . PASS END=205549020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 205549021 . G . PASS END=205549027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 205549028 . A . PASS END=205549028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,627:0,27,255:17,0 chr1 205549029 . C . PASS END=205549029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205549030 . A . PASS END=205549030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:17,0 chr1 205549031 . T . PASS END=205549042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:17,0 chr1 205549043 . G . PASS END=205549043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 205549044 . G . PASS END=205549060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 205549061 . C . PASS END=205549061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 205549062 . G . PASS END=205549070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 205549071 . C . PASS END=205549071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 205549072 . C . PASS END=205549072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 205549073 . T . PASS END=205549077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 205549789 . G . PASS END=205549789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:19,0 chr1 205549790 . T . PASS END=205549790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 205549791 . G . PASS END=205549791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,703:0,63,255:21,0 chr1 205549792 . C . LowGQ END=205549792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,558:31,0,255:18,0 chr1 205549793 . T . PASS END=205549793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr1 205549794 . C . PASS END=205549795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205549796 . A . PASS END=205549796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:19,0 chr1 205549797 . T . PASS END=205549797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,574:0,13,255:17,0 chr1 205549798 . T . PASS END=205549800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,670:0,46,255:19,0 chr1 205549801 . T . PASS END=205549802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:21:0,30,629:0,30,255:19,0 chr1 205549803 . C . LowGQ END=205549803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,582:9,0,255:18,0 chr1 205549804 . G . PASS END=205549805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:18,0 chr1 205549806 . G . PASS END=205549806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:17,0 chr1 205549807 . G . PASS END=205549811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,751:0,50,255:18,0 chr1 205549812 . T . PASS END=205549812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:18,0 chr1 205549813 . G . PASS END=205549813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:18,0 chr1 205549814 . G . PASS END=205549815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 205549816 . G . PASS END=205549816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:21,0 chr1 205549817 . C . PASS END=205549818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 205549819 . C . PASS END=205549819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:24,0 chr1 205549820 . T . PASS END=205549821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 205549822 . C . PASS END=205549822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr1 205549823 . T . PASS END=205549828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,933:0,78,255:26,0 chr1 205549829 . C . PASS END=205549843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1164:0,83,255:34,0 chr1 205549844 . C . PASS END=205549844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:32,0 chr1 205549845 . T . PASS END=205549874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1217:0,86,255:37,0 chr1 205549875 . C . PASS END=205549875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:35,0 chr1 205549876 . A . PASS END=205549882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1194:0,94,255:37,0 chr1 205549883 . C . PASS END=205549883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:35,0 chr1 205549884 . G . PASS END=205549908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1242:0,80,255:37,0 chr1 205549909 . C . LowGQ END=205549909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1094:0,0,255:31,0 chr1 205549910 . T . PASS END=205549915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:36:0,94,1221:0,94,255:35,0 chr1 205549916 . A . PASS END=205549916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1127:0,61,255:32,0 chr1 205549917 . T . PASS END=205549918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 205549919 . T . PASS END=205549920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:75:36:0,75,1142:0,75,255:26,0 chr1 205549921 . T . PASS END=205549924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,91,255:28,0 chr1 205549925 . G . PASS END=205549933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:29:0,62,911:0,62,255:25,0 chr1 205549934 . G . PASS END=205549934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,893:0,59,255:25,0 chr1 205549935 . C . PASS END=205549937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 205549938 . G . PASS END=205549938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,770:0,34,255:24,0 chr1 205549939 . C . PASS END=205549940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 205549941 . C . PASS END=205549949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 205549950 . T . PASS END=205549953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 205549954 . A . PASS END=205549955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 205549956 . G . PASS END=205549956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 205549957 . C . PASS END=205549981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr1 205549982 . G . PASS END=205549984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 205549985 . T . PASS END=205549987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 205549988 . C . PASS END=205549996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205549997 . A . PASS END=205549997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 205549998 . C . PASS END=205549999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 205550000 . G . PASS END=205550000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:27,0 chr1 205550001 . G . PASS END=205550007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 205550008 . A . PASS END=205550013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 205550014 . G . PASS END=205550027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 205550028 . C . PASS END=205550046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 205550047 . A . PASS END=205550047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:20,0 chr1 205550048 . A . PASS END=205550048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 205550049 . T . PASS END=205550049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 205553083 . C . PASS END=205553092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:26,0 chr1 205553093 . C . PASS END=205553235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1102:0,84,255:40,0 chr1 205553236 . T . PASS END=205553236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1011:0,54,255:27,0 chr1 205553237 . T . PASS END=205553237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 205553238 . T . PASS END=205553238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 205553239 . C . PASS END=205553242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 205553243 . C . PASS END=205553251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:24,0 chr1 205554004 . G . PASS END=205554045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,147,255:40,0 chr1 205554046 . G . PASS END=205554084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,149,255:40,0 chr1 205554085 . G C, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.172;ReadPosRankSum=3.461;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,27,0:0.519,0.000:52:17,15,0:8,12,0:48:85,0,50,966,894,1860:255,0,255:19,0:5.0000e+01,6.5751e-05,5.2871e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,15,14,13:8,17,12,15:205554085 chr1 205554086 . C . PASS END=205554094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,117,1755:0,118,255:40,0 chr1 205554095 . A C, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.114;ReadPosRankSum=3.005;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,26,0:0.510,0.000:51:17,15,0:8,11,0:48:85,0,50,922,853,1775:255,0,255:19,0:5.0000e+01,6.5492e-05,5.2949e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,16,11,15:11,14,12,14:205554085 chr1 205554096 . C . PASS END=205554117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:35:0,87,1305:0,105,255:40,0 chr1 205554118 . C . PASS END=205554118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:28,0 chr1 205554119 . G . PASS END=205554119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 205555162 . G . PASS END=205555178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 205555179 . C . PASS END=205555182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 205555183 . T . PASS END=205555183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 205555184 . A . PASS END=205555235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:19,0 chr1 205555236 . C . PASS END=205555236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:17,0 chr1 205555237 . C . PASS END=205555284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr1 205555285 . A . PASS END=205555293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:17:0,37,585:0,37,255:15,0 chr1 205555294 . T . PASS END=205555298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:14,0 chr1 205555299 . A . PASS END=205555307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 205555308 . G . PASS END=205555308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 205555309 . C . PASS END=205555316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 205555317 . C . PASS END=205555317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 205555318 . A . PASS END=205555318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 205555319 . T . PASS END=205555331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,22,255:9,0 chr1 205555332 . C . PASS END=205555335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 205561268 . G . PASS END=205561274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1086:0,84,255:30,0 chr1 205561275 . T . PASS END=205561275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 205561276 . G . PASS END=205561375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:31:0,92,1172:0,92,255:40,0 chr1 205561376 . A . PASS END=205561376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr1 205561377 . G . PASS END=205561385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:33,0 chr1 205561386 . C . PASS END=205561409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 205561410 . A . PASS END=205561415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,691:0,49,255:19,0 chr1 205566908 . G . PASS END=205566948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1074:0,80,255:35,0 chr1 205566949 . G . PASS END=205566949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 205566950 . A . PASS END=205566957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1074:0,88,255:34,0 chr1 205566958 . C . PASS END=205566958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:31,0 chr1 205566959 . T . PASS END=205566978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1180:0,83,255:32,0 chr1 205568259 . A . PASS END=205568352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:43:0,118,1560:0,118,255:40,0 chr1 205568353 . A . PASS END=205568379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1260:0,105,255:40,0 chr1 205569534 . T . PASS END=205569589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,135,255:40,0 chr1 205585674 . T . PASS END=205585772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,87,255:40,0 chr1 205588085 . C . PASS END=205588201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,99,1485:0,113,255:40,0 chr1 205588956 . T . PASS END=205589117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:91:35:0,91,1235:0,91,255:40,1 chr1 205589118 . A . PASS END=205589118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:66:49:0,66,1422:0,66,255:35,0 chr1 205589119 . G . PASS END=205589119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,114,1710:0,141,255:38,0 chr1 205589120 . A . PASS END=205589120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1392:0,79,255:35,0 chr1 205589121 . A . PASS END=205589219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1194:0,93,255:40,0 chr1 205589220 . T . PASS END=205589220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 205589221 . C . PASS END=205589221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 205589222 . T . PASS END=205589222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 205589223 . T . PASS END=205589230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:32,0 chr1 205589231 . T . PASS END=205589231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:30,0 chr1 205589232 . A . PASS END=205589237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1127:0,80,255:32,0 chr1 205589238 . T . PASS END=205589238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1032:0,79,255:30,0 chr1 205589239 . T . PASS END=205589254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr1 205589255 . A . PASS END=205589259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 205589260 . G . PASS END=205589292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1202:0,90,255:31,0 chr1 205589293 . T . PASS END=205589293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 205589294 . C . PASS END=205589528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:30:0,87,1163:0,90,255:40,0 chr1 205589529 . A . PASS END=205589529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:31,0 chr1 205589530 . G . PASS END=205589720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1089:0,80,255:40,0 chr1 205589721 . A . PASS END=205589721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1333:0,70,255:36,0 chr1 205589722 . G . PASS END=205589930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:38:0,88,1449:0,88,255:40,0 chr1 205589931 . C . PASS END=205589938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,108,1620:0,115,255:38,0 chr1 205589939 . T . PASS END=205589939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1329:0,68,255:34,0 chr1 205589940 . C . PASS END=205589947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,104,255:35,0 chr1 205589948 . T . PASS END=205589948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:33,0 chr1 205589949 . C . PASS END=205589956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,98,255:32,0 chr1 205589957 . T . PASS END=205589966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:38:0,72,1080:0,97,255:26,0 chr1 205592804 . C . PASS END=205592836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr1 205592837 . T . PASS END=205592837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,927:0,70,255:27,0 chr1 205592838 . T . PASS END=205592907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:29:0,83,1186:0,83,255:38,0 chr1 205592908 . G . PASS END=205592908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr1 205592909 . C . PASS END=205592990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1057:0,87,255:37,0 chr1 205592991 . A . PASS END=205592997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr1 205592998 . T . PASS END=205593008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:22:0,42,630:0,66,255:18,0 chr1 205593009 . A . PASS END=205593009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr1 205593010 . T . PASS END=205593010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 205628362 . C . PASS END=205628371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205628372 . T . PASS END=205628377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 205628378 . G . PASS END=205628378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 205628379 . C . PASS END=205628394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:17,0 chr1 205628395 . A . PASS END=205628395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 205628396 . A . PASS END=205628396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 205628397 . A . PASS END=205628399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,703:0,63,255:22,0 chr1 205628400 . C . PASS END=205628400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 205628401 . T . PASS END=205628405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr1 205628406 . G . PASS END=205628409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:28,0 chr1 205628410 . A . PASS END=205628410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr1 205628411 . G . PASS END=205628419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:31,0 chr1 205628420 . A . PASS END=205628420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1024:0,79,255:30,0 chr1 205628421 . T . PASS END=205628428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1155:0,80,255:31,0 chr1 205628429 . A . PASS END=205628429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 205628430 . G . PASS END=205628439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1143:0,85,255:32,0 chr1 205628440 . T . PASS END=205628440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:32,0 chr1 205628441 . G . PASS END=205628788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1158:0,88,255:40,0 chr1 205628789 . G . PASS END=205628790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 205628791 . C . PASS END=205628795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 205628796 . A . PASS END=205628799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 205630989 . C . PASS END=205631016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,307:0,33,255:12,0 chr1 205631017 . A . PASS END=205631017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:11,0 chr1 205631018 . G . PASS END=205631018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 205631019 . T . PASS END=205631019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 205631020 . G . PASS END=205631022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 205631023 . T . PASS END=205631023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 205631024 . A . PASS END=205631038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,513:0,45,255:19,0 chr1 205631039 . G . PASS END=205631055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:22,0 chr1 205631056 . C . PASS END=205631056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 205631057 . C . PASS END=205631059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr1 205631060 . T . PASS END=205631060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:14:25:0,14,786:0,14,255:23,0 chr1 205631061 . G . PASS END=205631063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 205631064 . G . PASS END=205631064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 205631065 . G . PASS END=205631070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 205631071 . G . PASS END=205631071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 205631072 . A . PASS END=205631108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,860:0,62,255:26,0 chr1 205631109 . G . PASS END=205631115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 205631116 . G . PASS END=205631116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 205631117 . C . PASS END=205631128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1049:0,84,255:31,0 chr1 205631129 . A . PASS END=205631129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 205631130 . A . PASS END=205631166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1263:0,86,255:33,0 chr1 205631167 . A . PASS END=205631179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,77,255:26,0 chr1 205631180 . G . PASS END=205631180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 205631181 . C . PASS END=205631211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 205631212 . A . PASS END=205631212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 205631213 . T . PASS END=205631213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205631214 . G . PASS END=205631219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 205631220 . C . PASS END=205631220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205631221 . T . PASS END=205631229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr1 205631230 . A . PASS END=205631254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 205631748 . T . PASS END=205631776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1566:0,113,255:40,0 chr1 205631961 . C . PASS END=205631965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 205631966 . T . PASS END=205631967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 205631968 . A . PASS END=205631968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 205631969 . T . PASS END=205631971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 205631972 . T . LowGQ END=205631972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:4,0,245:8,0 chr1 205631973 . G . PASS END=205631975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr1 205631976 . T . PASS END=205632002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 205632003 . T . PASS END=205632010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 205632011 . C . PASS END=205632011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 205632012 . C . PASS END=205632012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 205632013 . C . PASS END=205632086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 205632087 . C . PASS END=205632105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,296:0,27,255:9,0 chr1 205632106 . C . PASS END=205632106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 205632107 . A . PASS END=205632107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 205632108 . G . PASS END=205632117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 205632118 . C . PASS END=205632118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 205632119 . A . PASS END=205632123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 205632124 . G . PASS END=205632127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 205632128 . C . PASS END=205632182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 205632183 . C . PASS END=205632183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 205632184 . C . PASS END=205632185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205632186 . G . PASS END=205632198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 205632199 . G . PASS END=205632199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205632200 . T . PASS END=205632204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 205632205 . C . PASS END=205632206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205632207 . A . PASS END=205632209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 205632210 . A . PASS END=205632210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 205632211 . G . PASS END=205632220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:16,0 chr1 205632221 . G . PASS END=205632221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 205632222 . A . PASS END=205632228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:17,0 chr1 205632229 . T . PASS END=205632229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 205632230 . T . PASS END=205632232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 205632233 . G . PASS END=205632233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 205632234 . C . PASS END=205632234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 205632235 . T . PASS END=205632235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 205632236 . G . PASS END=205632242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 205632243 . T . PASS END=205632243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr1 205632244 . G . PASS END=205632244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 205632245 . G . PASS END=205632251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,32,255:11,0 chr1 205632252 . G . PASS END=205632256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:13:0,27,405:0,32,255:9,0 chr1 205632257 . G . LowGQ END=205632257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:9,0 chr1 205632258 . C . PASS END=205632267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:20:9:0,20,327:0,20,255:9,0 chr1 205632268 . C . PASS END=205632297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 205632298 . G . PASS END=205632366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,609:0,41,255:19,0 chr1 205632367 . G . PASS END=205632375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 205632376 . A . PASS END=205632376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 205632377 . A . PASS END=205632380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 205632381 . C . PASS END=205632404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,684:0,47,255:19,0 chr1 205632405 . C . PASS END=205632414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr1 205632415 . G . PASS END=205632415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 205632416 . A . PASS END=205632416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 205632417 . T . PASS END=205632417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 205632418 . C . PASS END=205632419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 205632420 . T . PASS END=205632420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 205632421 . G . PASS END=205632424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:22,0 chr1 205632425 . G . PASS END=205632425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 205632426 . C . PASS END=205632429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 205632430 . G . PASS END=205632430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 205632431 . A . PASS END=205632449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,939:0,64,255:26,0 chr1 205632450 . A . PASS END=205632450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:25,0 chr1 205632451 . G . PASS END=205632487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,846:0,72,255:25,0 chr1 205632488 . T . PASS END=205632488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 205632489 . C . PASS END=205632517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 205632518 . A . PASS END=205632518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:24,0 chr1 205632519 . A . PASS END=205632527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 205632528 . G . PASS END=205632528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 205632529 . C . PASS END=205632538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 205632539 . A . PASS END=205632539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 205632540 . G . PASS END=205632546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr1 205632547 . C . PASS END=205632547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 205632548 . A . PASS END=205632554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205632555 . G . PASS END=205632555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 205632556 . C . PASS END=205632576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:22,0 chr1 205632577 . G . PASS END=205632579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:18,0 chr1 205632580 . C . PASS END=205632587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:20,0 chr1 205632588 . C . PASS END=205632595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,56,255:19,0 chr1 205632596 . C . PASS END=205632596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr1 205632597 . A . PASS END=205632605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 205632606 . T . PASS END=205632606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:18,0 chr1 205632607 . T . PASS END=205632627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 205632628 . C . PASS END=205632632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 205632633 . T . PASS END=205632634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 205632635 . C . PASS END=205632637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205632638 . A . PASS END=205632639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 205632640 . G . PASS END=205632642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205632643 . C . PASS END=205632672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:17:0,47,607:0,47,255:18,0 chr1 205632673 . A . PASS END=205632673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 205632674 . T . PASS END=205632715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,659:0,51,255:18,0 chr1 205632716 . A . PASS END=205632716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:16,0 chr1 205632717 . C . PASS END=205632724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 205632725 . A . PASS END=205632743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,495:0,32,255:13,0 chr1 205632744 . T . PASS END=205632744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 205632745 . G . PASS END=205632746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 205633613 . C . PASS END=205633763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1148:0,85,255:40,0 chr1 205633764 . C . PASS END=205633764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 205633765 . A . PASS END=205633769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 205633770 . C . PASS END=205633779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr1 205633780 . A . PASS END=205633784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:26:0,48,720:0,78,255:19,0 chr1 205687408 . T . PASS END=205687408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr1 205687409 . T . PASS END=205687411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:17,0 chr1 205687412 . T . PASS END=205687412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr1 205687413 . C . PASS END=205687415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr1 205687416 . C . PASS END=205687421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 205687422 . A . PASS END=205687422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 205687423 . A . PASS END=205687425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:23,0 chr1 205687426 . G . PASS END=205687429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 205687430 . T . PASS END=205687430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 205687431 . C . PASS END=205687432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 205687433 . T . PASS END=205687433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 205687434 . C . PASS END=205687478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:30:0,80,1095:0,80,255:37,0 chr1 205687479 . A . PASS END=205687479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1200:0,78,255:37,0 chr1 205687480 . T . PASS END=205687531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:37:0,83,1236:0,83,255:39,0 chr1 205687532 . G . PASS END=205687532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1319:0,70,255:36,0 chr1 205687533 . G . PASS END=205687557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:34:0,81,1215:0,82,255:36,0 chr1 205687558 . A . PASS END=205687571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:23,0 chr1 205687572 . C . PASS END=205687587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr1 205687588 . T . PASS END=205687588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 205687589 . T . PASS END=205687589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:12,0 chr1 205687590 . T . PASS END=205687594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:30:16:0,30,450:0,37,255:13,0 chr1 205687595 . G . PASS END=205687597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 205687598 . C . PASS END=205687607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,441:0,36,255:12,0 chr1 205688655 . C . PASS END=205688804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1240:0,92,255:40,0 chr1 205689629 . T . PASS END=205689643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:33:0,96,1440:0,99,255:40,0 chr1 205689644 . C . LowGQ END=205689644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,10:46:0:46:0,0,911:43,0,255:36,0 chr1 205689645 . C . PASS END=205689645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:27:47:0,27,1163:0,27,255:40,0 chr1 205689646 . T . PASS END=205689781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:35:0,81,1215:0,105,255:40,0 chr1 205693054 . C . PASS END=205693109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,200,255:40,0 chr1 205696828 . C . PASS END=205696933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,105,1652:0,105,255:40,0 chr1 205698700 . C . PASS END=205698749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:86:0,120,1800:0,219,255:40,0 chr1 205719085 . C . PASS END=205719085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 205719086 . T . PASS END=205719086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:15,0 chr1 205719087 . G . PASS END=205719090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 205719091 . G . PASS END=205719091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 205719092 . G . PASS END=205719101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 205739470 . C . PASS END=205739480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,105,1307:0,107,255:40,0 chr1 205739481 . A . PASS END=205739481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:21:42:0,21,1127:0,21,255:37,0 chr1 205739482 . C . PASS END=205739581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,102,1511:0,102,255:40,0 chr1 205739861 . C . PASS END=205739894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1203:0,86,255:38,0 chr1 205739895 . C . PASS END=205739895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1318:0,67,255:36,0 chr1 205739896 . T . PASS END=205739976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1180:0,83,255:40,0 chr1 205739977 . A . PASS END=205739982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1035:0,76,255:26,0 chr1 205740600 . C . PASS END=205740605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 205740606 . G . PASS END=205740606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 205740607 . G . PASS END=205740607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 205740608 . C . PASS END=205740617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 205740618 . G . PASS END=205740628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 205740629 . G . PASS END=205740629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 205740630 . C . PASS END=205740631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 205740632 . C . PASS END=205740632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 205740633 . T . PASS END=205740770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:30:0,90,1125:0,90,255:40,0 chr1 205740771 . G . PASS END=205740777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:35:0,60,900:0,73,255:22,0 chr1 205740778 . T . PASS END=205740781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:54:35:0,54,810:0,89,255:18,0 chr1 205741624 . C . PASS END=205741695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:62:0,120,1800:0,181,255:40,0 chr1 205743961 . C . PASS END=205743961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 205743962 . T . PASS END=205743964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 205743965 . C . PASS END=205743968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,560:0,45,255:17,0 chr1 205743969 . G . PASS END=205743969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr1 205743970 . T . PASS END=205743970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 205743971 . G . PASS END=205743971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:16,0 chr1 205743972 . G . PASS END=205743974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,696:0,44,255:18,0 chr1 205743975 . T . PASS END=205743976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:19,0 chr1 205743977 . G . PASS END=205743981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 205743982 . G . PASS END=205743982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:18,0 chr1 205743983 . T . PASS END=205743985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,583:0,43,255:19,0 chr1 205743986 . G . PASS END=205743986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:17,0 chr1 205743987 . C . PASS END=205743987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 205743988 . T . PASS END=205743988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 205743989 . G . PASS END=205743994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 205743995 . G . PASS END=205743998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 205743999 . T . PASS END=205743999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 205744000 . G . PASS END=205744003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:23,0 chr1 205744004 . A . PASS END=205744004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 205744005 . T . PASS END=205744014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,734:0,69,255:23,0 chr1 205744015 . C . PASS END=205744015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,775:0,25,255:21,0 chr1 205744016 . C . PASS END=205744016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,792:0,41,255:22,0 chr1 205744017 . A . PASS END=205744017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 205744018 . G . PASS END=205744018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 205744019 . C . PASS END=205744020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 205744021 . A . PASS END=205744021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:21,0 chr1 205744022 . C . PASS END=205744023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 205744024 . T . PASS END=205744024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:21,0 chr1 205744025 . C . PASS END=205744038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:24,0 chr1 205744039 . C . PASS END=205744039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 205744040 . G . PASS END=205744040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 205744041 . T . PASS END=205744041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:22,0 chr1 205744042 . C . PASS END=205744055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 205744056 . A . PASS END=205744056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 205744057 . C . PASS END=205744062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 205744063 . A . PASS END=205744084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,668:0,47,255:19,0 chr1 205760661 . C . PASS END=205760808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:29:0,80,1080:0,80,255:40,0 chr1 205760809 . T . PASS END=205760809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:30,0 chr1 205760810 . G . PASS END=205760820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr1 205760821 . T . PASS END=205760826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:24,0 chr1 205760827 . A . PASS END=205760846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,706:0,57,255:19,0 chr1 205763998 . C . PASS END=205764013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,886:0,69,255:25,0 chr1 205764014 . G . PASS END=205764036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,986:0,81,255:30,0 chr1 205764037 . G . PASS END=205764037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 205764038 . A . PASS END=205764060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:30:0,82,1111:0,82,255:34,0 chr1 205764061 . C . PASS END=205764061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:29,0 chr1 205764062 . T . PASS END=205764105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1177:0,80,255:33,0 chr1 205764106 . C . PASS END=205764106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1104:0,65,255:28,0 chr1 205764107 . A . PASS END=205764111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 205764112 . G . PASS END=205764112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 205764113 . A . PASS END=205764116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 205764117 . A . PASS END=205764117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 205764118 . G . PASS END=205764123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 205764124 . C . PASS END=205764137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,71,255:26,0 chr1 205764138 . A . PASS END=205764138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,795:0,39,255:21,0 chr1 205764139 . A . PASS END=205764139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 205764140 . T . PASS END=205764140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 205764141 . T . PASS END=205764144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 205764145 . A . PASS END=205764145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 205764146 . T . PASS END=205764146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 205764472 . C . PASS END=205764474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,676:0,41,255:19,0 chr1 205764475 . G . PASS END=205764475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 205764476 . G . PASS END=205764477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 205764478 . T . PASS END=205764483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 205764484 . A . PASS END=205764484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 205764485 . G . PASS END=205764490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 205764491 . A . PASS END=205764491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 205764492 . C . PASS END=205764492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr1 205764493 . A . PASS END=205764497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:25,0 chr1 205764498 . C . PASS END=205764571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:28:0,83,1033:0,83,255:36,0 chr1 205764572 . G . PASS END=205764582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:26,0 chr1 205764583 . C . PASS END=205764594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:20:0,51,765:0,60,255:19,0 chr1 205764595 . T . PASS END=205764595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 205764596 . G . PASS END=205764602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:17,0 chr1 205764603 . A . PASS END=205764606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr1 205766052 . C . PASS END=205766114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,159,255:40,0 chr1 205766115 . A . PASS END=205766131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:55:0,87,1305:0,149,255:40,0 chr1 205767032 . C . PASS END=205767039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,933:0,75,255:26,0 chr1 205767040 . G . PASS END=205767154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:28:0,84,1017:0,84,255:40,0 chr1 205767155 . A . PASS END=205767179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 205767797 . T . PASS END=205767799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 205767800 . G . PASS END=205767907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:29:0,86,1056:0,86,255:40,0 chr1 205767908 . T . PASS END=205767908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1551:0,74,255:40,0 chr1 205767909 . G . PASS END=205767943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1560:0,105,255:40,0 chr1 205768085 . C . PASS END=205768085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 205768086 . C . PASS END=205768087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 205768088 . G . PASS END=205768107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,623:0,51,255:18,0 chr1 205768108 . G . PASS END=205768108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 205768109 . C . PASS END=205768123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 205768124 . T . PASS END=205768128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:20,0 chr1 205768129 . C . PASS END=205768130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205768131 . G . PASS END=205768162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,917:0,62,255:26,0 chr1 205768163 . C . PASS END=205768164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 205768165 . T . PASS END=205768171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:25,0 chr1 205768172 . T . PASS END=205768172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 205768173 . C . PASS END=205768174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 205768175 . A . PASS END=205768175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 205768176 . G . PASS END=205768182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 205768183 . A . PASS END=205768183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:22,0 chr1 205768184 . C . PASS END=205768186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 205768187 . C . PASS END=205768187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 205768188 . G . PASS END=205768195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 205768196 . T . PASS END=205768196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 205768197 . G . PASS END=205768198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205768199 . A . PASS END=205768209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 205768210 . C . LowGQ END=205768210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,698:3,0,255:16,0 chr1 205768211 . C . PASS END=205768212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,668:0,21,255:16,0 chr1 205768213 . A . PASS END=205768213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,599:0,18,255:14,0 chr1 205768214 . C . PASS END=205768214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 205768215 . C . PASS END=205768216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:14,0 chr1 205768217 . C . PASS END=205768218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:14,0 chr1 205768219 . G . PASS END=205768219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,550:0,12,255:12,0 chr1 205768220 . T . LowGQ END=205768220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:4,0,255:11,0 chr1 205768221 . G . PASS END=205768221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 205768222 . G . PASS END=205768224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:12,0 chr1 205768225 . T . PASS END=205768227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:12,0 chr1 205768228 . A . PASS END=205768228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 205768229 . C . PASS END=205768229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,519:0,9,255:12,0 chr1 205768887 . C . PASS END=205768915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1194:0,83,255:37,0 chr1 205768916 . T . PASS END=205768916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 205768917 . C . PASS END=205768927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1317:0,95,255:34,0 chr1 205768928 . C . PASS END=205768928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:35,0 chr1 205768929 . C . PASS END=205768946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1205:0,91,255:35,0 chr1 205768947 . T . PASS END=205768947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 205768948 . C . PASS END=205768955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,82,255:27,0 chr1 205768956 . G . PASS END=205768958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 205770081 . T . PASS END=205770188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:43:0,96,1440:0,129,255:40,0 chr1 205779198 . C . PASS END=205779204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 205779205 . A . PASS END=205779206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 205779207 . G . PASS END=205779223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1041:0,87,255:30,0 chr1 205779224 . C . PASS END=205779224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 205779225 . A . PASS END=205779230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:30,0 chr1 205779231 . G A, 139.83 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,12,0:0,19,0:90:178,93,0,1157,93,1157:255,96,0:0,0:1.3983e+02,8.9834e+01,0.0000e+00,4.5000e+02,1.2460e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,11:0,0,15,16 chr1 205779232 . G . PASS END=205779252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1209:0,89,255:37,0 chr1 205779253 . A . PASS END=205779253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 205779254 . A . PASS END=205779268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:37:0,80,1304:0,80,255:37,0 chr1 205779269 . G . PASS END=205779326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,83,255:36,0 chr1 205779327 . T . PASS END=205779327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:27,0 chr1 205779328 . G . PASS END=205779344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 205779345 . T . PASS END=205779345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 205779346 . T . PASS END=205779346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 205779347 . C . PASS END=205779353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 205779354 . C . PASS END=205779361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1041:0,84,255:29,0 chr1 205779362 . C . PASS END=205779362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 205779363 . G . PASS END=205779363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 205779364 . T . PASS END=205779386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 205779387 . C . PASS END=205779387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 205779388 . C . PASS END=205779397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 205779398 . T . PASS END=205779398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 205779399 . G . PASS END=205779406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 205779407 . C . PASS END=205779407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 205779408 . C . PASS END=205779420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 205779421 . A . PASS END=205779424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:25:0,51,765:0,75,255:19,0 chr1 205779425 . C . PASS END=205779426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:21,0 chr1 205779427 . T . PASS END=205779463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,698:0,54,255:19,0 chr1 205779464 . T . PASS END=205779464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 205779465 . C . PASS END=205779513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,599:0,51,255:19,0 chr1 205779514 . G . PASS END=205779514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 205779515 . A . PASS END=205779516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 205779517 . G . PASS END=205779517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 205779518 . G . PASS END=205779530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 205779531 . C . PASS END=205779538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,460:0,31,255:13,0 chr1 205779539 . G . PASS END=205779540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 205779541 . A . PASS END=205779544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205779545 . C . PASS END=205779553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr1 205779554 . C . PASS END=205779565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 205779566 . A . PASS END=205779568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 205779569 . T . PASS END=205779569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 205782998 . T . PASS END=205783001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 205797748 . T . PASS END=205797871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:94:47:0,94,1598:0,94,255:40,0 chr1 205799408 . C . PASS END=205799507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:40:0,106,1375:0,106,255:40,0 chr1 205801726 . C . PASS END=205801731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 205801732 . C . PASS END=205801867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1170:0,80,255:40,0 chr1 205801868 . C . PASS END=205801871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1105:0,63,255:31,0 chr1 205801872 . A . PASS END=205801872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 205801873 . T . PASS END=205801873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 205801874 . G . PASS END=205801874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 205801875 . T . PASS END=205801877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1058:0,60,255:29,0 chr1 205801878 . T . PASS END=205801878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:29,0 chr1 205801879 . T . PASS END=205801879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr1 205801880 . C . PASS END=205801880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 205801881 . G . PASS END=205801881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 205801882 . T . PASS END=205801882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 205801883 . G . PASS END=205801887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,991:0,51,255:28,0 chr1 205801888 . C . PASS END=205801889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 205801890 . A . PASS END=205801892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr1 205801893 . A . PASS END=205801893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 205801894 . C . PASS END=205801894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:24,0 chr1 205809380 . C . PASS END=205809382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 205809383 . T . PASS END=205809384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1256:0,72,255:35,0 chr1 205809385 . G . PASS END=205809450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1271:0,89,255:38,0 chr1 205809451 . A . PASS END=205809451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1158:0,74,255:29,0 chr1 205810939 . C . PASS END=205811017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:74:0,120,1800:0,204,255:40,0 chr1 205811282 . C . PASS END=205811343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:83:0,120,1800:0,237,255:40,0 chr1 205811804 . C . PASS END=205811879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,112,1800:0,112,255:40,0 chr1 205812795 . C . PASS END=205812874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:37:0,97,1388:0,97,255:40,0 chr1 205812875 . C . PASS END=205812911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,117,1755:0,127,255:40,0 chr1 205812912 . A G, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.800;ReadPosRankSum=3.954;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,23,0:0.500,0.000:46:12,13,0:11,10,0:48:85,0,50,823,822,1645:255,0,255:19,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,14,10,13:14,9,10,13 chr1 205812913 . T . PASS END=205812914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr1 205813215 . A . PASS END=205813216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 205813217 . G . PASS END=205813219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 205813220 . G . PASS END=205813220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 205813221 . A . PASS END=205813260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1072:0,80,255:35,0 chr1 205813261 . A . PASS END=205813261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:34,0 chr1 205813262 . G . PASS END=205813327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1169:0,80,255:38,0 chr1 205813328 . A . PASS END=205813328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr1 205813329 . G . PASS END=205813332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr1 205813333 . C . PASS END=205813333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 205813334 . T . PASS END=205813334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,978:0,43,255:24,0 chr1 205813335 . G . PASS END=205813345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1070:0,74,255:26,0 chr1 205813939 . C . PASS END=205813941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 205813942 . C . PASS END=205813942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:21:42:0,21,1150:0,21,255:35,0 chr1 205813943 . T . PASS END=205814025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:38:0,91,1406:0,91,255:40,0 chr1 205814453 . C . PASS END=205814459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 205814460 . G . PASS END=205814465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:18,0 chr1 205814466 . T . PASS END=205814482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:26,0 chr1 205814483 . C . PASS END=205814495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 205814496 . A . PASS END=205814496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr1 205814497 . T C, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,16,0:0,12,0:81:169,84,0,1070,84,1070:255,84,0:0,0:1.3127e+02,8.1266e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,8:0,0,14,14 chr1 205814498 . G . PASS END=205814533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1054:0,84,255:37,0 chr1 205814534 . C . PASS END=205814534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:34,0 chr1 205814535 . C . PASS END=205814636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,84,255:38,0 chr1 205814637 . T . PASS END=205814637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 205814638 . C . PASS END=205814642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 205814643 . A . PASS END=205814643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 205814644 . C . PASS END=205814646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 205814647 . C . PASS END=205814657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 205814658 . A . PASS END=205814668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:23,0 chr1 205814669 . G . PASS END=205814669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 205814670 . A . PASS END=205814671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 205814672 . C . PASS END=205814685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,44,255:15,0 chr1 205817013 . C . PASS END=205817017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,740:0,66,255:22,0 chr1 205817018 . T C, 47.56 PASS DP=22;MQ=78.23;MQRankSum=0.099;ReadPosRankSum=2.011;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:9,6,0:3,4,0:46:82,0,49,350,421,771:255,0,255:12,0:4.7555e+01,1.0355e-04,5.2000e+01,3.4975e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,5,5:9,3,5,5 chr1 205817019 . G . PASS END=205817022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 205817023 . G . PASS END=205817025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,806:0,53,255:19,0 chr1 205817026 . T . PASS END=205817035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,839:0,63,255:23,0 chr1 205817036 . T . PASS END=205817036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 205817037 . C . PASS END=205817041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 205817042 . A . PASS END=205817042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 205817043 . G . PASS END=205817047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 205817048 . G . PASS END=205817055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr1 205817056 . G . PASS END=205817057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 205817058 . A . PASS END=205817058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr1 205817059 . C . PASS END=205817066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 205817067 . A . PASS END=205817067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 205817068 . G . PASS END=205817099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1052:0,87,255:30,0 chr1 205819032 . C . PASS END=205819032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 205819033 . T . PASS END=205819036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 205819037 . A . PASS END=205819037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 205819038 . G . PASS END=205819038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 205819039 . C T, 48.41 PASS DP=22;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=0.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,9,0:0.409,0.000:22:8,3,0:5,6,0:47:83,0,50,322,465,787:255,0,255:13,0:4.8412e+01,8.4389e-05,5.3000e+01,3.2185e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,8,1:9,4,2,7 chr1 205819040 . G . PASS END=205819049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 205819050 . T . PASS END=205819050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 205819051 . C . PASS END=205819055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 205819056 . C . PASS END=205819056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 205819057 . G . PASS END=205819061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 205819062 . C . PASS END=205819063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 205819064 . T . PASS END=205819066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 205819067 . T . PASS END=205819075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 205819076 . T . PASS END=205819077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 205819078 . A . PASS END=205819088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr1 205819089 . G . PASS END=205819089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 205819090 . C . PASS END=205819093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 205819094 . G . PASS END=205819094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 205819095 . C . PASS END=205819103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1156:0,86,255:35,0 chr1 205819104 . G A, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.110;ReadPosRankSum=1.250;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,18,0:0.500,0.000:36:11,10,0:7,8,0:48:85,0,50,628,644,1271:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,9,9:12,6,11,7 chr1 205819105 . C . PASS END=205819141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1223:0,89,255:36,0 chr1 205819142 . G . PASS END=205819169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:31,0 chr1 205819170 . G . PASS END=205819170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 205819171 . G . PASS END=205819174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 205819175 . A . PASS END=205819193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr1 205819194 . G . PASS END=205819194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 205819195 . A . PASS END=205819200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:22,0 chr1 205884020 . C . PASS END=205884024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 205884025 . T . PASS END=205884025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 205884026 . C . PASS END=205884026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 205884027 . C . PASS END=205884031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 205884032 . C . PASS END=205884043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,225:0,21,225:9,0 chr1 205884044 . A . PASS END=205884056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 205884057 . C . PASS END=205884057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 205884058 . C . PASS END=205884061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 205884062 . T C, 50.00 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=0.377;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,7,0:0.538,0.000:13:5,2,0:1,5,0:48:85,0,50,234,215,448:208,0,193:6,0:5.0000e+01,6.6010e-05,5.2833e+01,2.3378e+02,2.4940e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,6,1:3,3,3,4 chr1 205884063 . G . PASS END=205884071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 205884072 . G . PASS END=205884079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:15,0 chr1 205884080 . T . PASS END=205884080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 205884081 . T . PASS END=205884088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr1 205884089 . G . PASS END=205884099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:23,0 chr1 205884100 . C . PASS END=205884106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:26,0 chr1 205884107 . G . PASS END=205884120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 205884121 . T . PASS END=205884121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:25,0 chr1 205884122 . C . PASS END=205884129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 205884130 . G . PASS END=205884130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 205884131 . G . PASS END=205884131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 205884132 . C . PASS END=205884132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr1 205884133 . T . PASS END=205884142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1088:0,90,255:32,0 chr1 205884143 . A . PASS END=205884143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:30,0 chr1 205884144 . A . PASS END=205884158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 205884159 . T . PASS END=205884159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 205884160 . G . PASS END=205884167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 205884168 . G . PASS END=205884168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 205884169 . C . PASS END=205884178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 205884179 . C . PASS END=205884180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 205884181 . G . PASS END=205884236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1133:0,86,255:33,0 chr1 205884237 . T . PASS END=205884273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1163:0,86,255:31,0 chr1 205884274 . T C, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=1.965;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:7,8,0:7,9,0:48:85,0,49,592,500,1092:255,0,255:13,0:5.0000e+01,6.8598e-05,5.2368e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,6,11:7,7,9,8 chr1 205884275 . G . PASS END=205884276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 205884277 . A . PASS END=205884294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,823:0,66,255:22,0 chr1 205884295 . C . PASS END=205884311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr1 205884485 . T . PASS END=205884494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,839:0,66,255:23,0 chr1 205884495 . G . PASS END=205884496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 205884497 . C . PASS END=205884506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr1 205884507 . G . PASS END=205884507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 205884508 . C . PASS END=205884528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr1 205884529 . T . PASS END=205884532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 205886411 . C . PASS END=205886418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1294:0,92,255:36,0 chr1 205886419 . A . PASS END=205886458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1305:0,108,255:39,0 chr1 205886459 . G . PASS END=205886459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:29,0 chr1 205886460 . G . PASS END=205886473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr1 205886474 . C . PASS END=205886482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 205887968 . C . PASS END=205888098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:33:0,93,1233:0,95,255:40,0 chr1 205888099 . C . PASS END=205888099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1255:0,61,255:30,0 chr1 205888100 . A . PASS END=205888104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:33,0 chr1 205888105 . A . PASS END=205888105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:28,0 chr1 205888106 . C . PASS END=205888109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:31,0 chr1 205888110 . T . PASS END=205888113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:33:0,78,1170:0,85,255:26,0 chr1 205889304 . C . PASS END=205889358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,111,1637:0,117,255:40,0 chr1 205890694 . C . PASS END=205890716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 205890717 . T . PASS END=205890721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 205890722 . T . PASS END=205890722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr1 205890723 . C . PASS END=205890735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 205890736 . T . PASS END=205890736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 205890737 . C . PASS END=205890743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,545:0,48,255:16,0 chr1 205890744 . T . PASS END=205890744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr1 205890745 . G . PASS END=205890751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,544:0,48,255:17,0 chr1 205890752 . A . PASS END=205890752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr1 205890753 . T . PASS END=205890757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,560:0,51,255:19,0 chr1 205890758 . G . PASS END=205890758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr1 205890759 . T . PASS END=205890768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,662:0,41,255:19,0 chr1 205890769 . G . PASS END=205890769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 205890770 . A . PASS END=205890776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 205890777 . G . PASS END=205890797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr1 205890798 . C . PASS END=205890808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 205890809 . C . PASS END=205890816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:23,0 chr1 205890817 . C . PASS END=205890817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 205890818 . T . PASS END=205890839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:23,0 chr1 205890840 . T . PASS END=205890840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr1 205890841 . C . PASS END=205890872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 205890873 . T . PASS END=205890873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 205890874 . G . PASS END=205890892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,63,255:21,0 chr1 205890893 . C . PASS END=205890934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,44,255:19,0 chr1 205890935 . G . PASS END=205890935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 205890936 . C . PASS END=205890946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr1 205890947 . T . PASS END=205890957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 205890958 . C . PASS END=205890958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 205890959 . T . PASS END=205890959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,340:0,11,255:13,0 chr1 205890960 . C . PASS END=205890961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 205890962 . T . PASS END=205890975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 205892210 . C . PASS END=205892323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:36:0,90,1324:0,90,255:40,0 chr1 205892463 . C . PASS END=205892555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,173,255:40,0 chr1 205892672 . C . PASS END=205892741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,105,1715:0,105,255:40,0 chr1 205893511 . A . PASS END=205893617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:42:0,120,1800:0,125,255:40,0 chr1 205893635 . T . PASS END=205893646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,171,255:40,0 chr1 205895663 . A . PASS END=205895758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:41:0,93,1395:0,108,255:40,0 chr1 205896339 . C . PASS END=205896416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:37:0,95,1320:0,95,255:40,0 chr1 205896620 . C . PASS END=205896733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1214:0,81,255:40,0 chr1 205897030 . C . PASS END=205897042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:29,0 chr1 205897043 . A . PASS END=205897043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 205897044 . C . PASS END=205897073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1327:0,92,255:38,0 chr1 205897074 . G . PASS END=205897074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:37,0 chr1 205897075 . G . PASS END=205897158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1260:0,93,255:40,0 chr1 205897159 . C . PASS END=205897174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr1 205897175 . A . PASS END=205897175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 205897176 . A . PASS END=205897177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 205897955 . C . PASS END=205898037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:94:34:0,94,1256:0,94,255:40,0 chr1 205898332 . C . PASS END=205898334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 205898335 . A . PASS END=205898336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 205898337 . T . PASS END=205898337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 205898338 . C . PASS END=205898362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr1 205898363 . A . PASS END=205898459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,948:0,81,255:38,0 chr1 205898460 . G . PASS END=205898484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr1 205899020 . A . PASS END=205899020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 205899021 . A . PASS END=205899021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 205899022 . A . PASS END=205899181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:31:0,80,947:0,80,255:40,0 chr1 205899182 . C . PASS END=205899184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 205899595 . T . PASS END=205899595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 205900988 . C . PASS END=205901003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr1 205901004 . A . PASS END=205901013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:25,0 chr1 205901014 . G . PASS END=205901017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 205901018 . A . PASS END=205901026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 205901027 . G . PASS END=205901027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 205901028 . T . PASS END=205901028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 205901029 . G . PASS END=205901029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 205901030 . C . PASS END=205901038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 205901039 . A . PASS END=205901039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 205901040 . G . PASS END=205901137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1077:0,83,255:38,0 chr1 205901138 . C . PASS END=205901138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 205901139 . A . PASS END=205901152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1210:0,96,255:32,0 chr1 205901153 . G . PASS END=205901153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 205901154 . G . PASS END=205901157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 205901158 . A . PASS END=205901161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:24,0 chr1 205901162 . A . PASS END=205901163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr1 205901830 . C . PASS END=205901832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1363:0,95,255:36,0 chr1 205901833 . G . PASS END=205901833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:35,0 chr1 205901834 . C . PASS END=205901940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:37:0,89,1459:0,89,255:40,0 chr1 205902073 . C . PASS END=205902084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr1 205902085 . G . PASS END=205902086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 205902087 . A . PASS END=205902092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 205902093 . C . PASS END=205902194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1131:0,80,255:40,0 chr1 205902195 . A . PASS END=205902195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 205902196 . T . PASS END=205902196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 205902197 . C . PASS END=205902197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 205902198 . T . PASS END=205902204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 205902205 . A . PASS END=205902210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 205902211 . A . PASS END=205902211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,970:0,35,255:26,0 chr1 205902212 . T . PASS END=205902212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:25,0 chr1 205904824 . C . PASS END=205904933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:82:39:0,82,1395:0,82,255:40,0 chr1 205904934 . C . PASS END=205904934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1296:0,62,255:29,0 chr1 205904935 . C . PASS END=205904941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1305:0,97,255:31,0 chr1 205904942 . G . PASS END=205904944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr1 205904945 . T . LowGQ END=205904945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:0:35:0,0,1064:11,0,255:26,0 chr1 205904946 . C . PASS END=205904946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:25,0 chr1 205904947 . A . LowGQ END=205904948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:0:35:0,0,1008:11,0,255:25,0 chr1 206135293 . C . PASS END=206135359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,127,255:40,0 chr1 206137335 . A . PASS END=206137486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:68:0,120,1800:0,188,255:40,0 chr1 206137772 . A . PASS END=206137821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,258:0,24,255:9,0 chr1 206137822 . C . PASS END=206137822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 206137823 . C . PASS END=206137830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 206137831 . A . PASS END=206137832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr1 206139305 . A . PASS END=206139309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,548:0,51,255:17,0 chr1 206139310 . T . PASS END=206139310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 206139311 . A . PASS END=206139314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 206139315 . A . PASS END=206139315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr1 206139316 . C . PASS END=206139317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 206139318 . T . PASS END=206139318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,438:0,34,255:16,0 chr1 206139319 . T . PASS END=206139328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 206139329 . A . PASS END=206139336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 206139337 . G . PASS END=206139348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 206139349 . C . PASS END=206139349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 206139350 . C . PASS END=206139350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 206139351 . T . PASS END=206139356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr1 206139357 . G . PASS END=206139357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 206139358 . C . PASS END=206139411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr1 206139412 . T . PASS END=206139417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 206139418 . T . PASS END=206139443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:6,0 chr1 206139444 . T . PASS END=206139452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 206139453 . C . PASS END=206139460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 206141446 . C . PASS END=206141446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 206141447 . G . PASS END=206141450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 206141451 . T . PASS END=206141456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 206141457 . T . PASS END=206141457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 206141458 . C . PASS END=206141462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 206141463 . G . PASS END=206141463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 206141464 . A . PASS END=206141466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 206141467 . A . PASS END=206141467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 206141468 . T . PASS END=206141476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,380:0,33,255:11,0 chr1 206141477 . A . PASS END=206141482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:17,0 chr1 206141483 . A . PASS END=206141483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 206141484 . T . PASS END=206141484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 206141485 . C . PASS END=206141491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 206141492 . T . PASS END=206141494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,588:0,35,255:16,0 chr1 206141495 . A . PASS END=206141500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 206141501 . A . PASS END=206141501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 206141502 . A . PASS END=206141502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 206141503 . G . PASS END=206141503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 206141504 . G . PASS END=206141514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 206141515 . T . PASS END=206141515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,450:0,18,255:15,0 chr1 206141516 . T . PASS END=206141516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 206141517 . T . PASS END=206141521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 206141522 . T . PASS END=206141522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 206141523 . G . PASS END=206141523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 206145454 . T . PASS END=206145578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:35:0,84,1260:0,105,255:40,0 chr1 206146975 . C . PASS END=206147066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,2:115:99:97:0,120,1800:0,190,255:40,0 chr1 206153957 . G . PASS END=206154051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:90:37:0,90,1350:0,111,255:40,0 chr1 206224441 . A . PASS END=206224445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 206224446 . T . PASS END=206224455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr1 206224456 . C . PASS END=206224474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:12,0 chr1 206224475 . C . PASS END=206224475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 206224476 . C . PASS END=206224476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 206224477 . C . PASS END=206224488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 206224489 . C . PASS END=206224489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 206224490 . T . PASS END=206224504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,584:0,51,255:19,0 chr1 206224505 . C . PASS END=206224510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 206224511 . C . PASS END=206224520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 206224521 . G . PASS END=206224529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 206224530 . T . PASS END=206224540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 206224541 . C . PASS END=206224543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 206224544 . A . PASS END=206224552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 206224553 . T . PASS END=206224567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 206224568 . C . PASS END=206224568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 206224569 . T . PASS END=206224598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:21,0 chr1 206224599 . G . PASS END=206224638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,590:0,48,255:18,0 chr1 206224639 . T . PASS END=206224653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,495:0,31,255:13,0 chr1 206224654 . T . PASS END=206224654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 206224655 . T . PASS END=206224669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 206224670 . C . PASS END=206224670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 206224671 . C . PASS END=206224692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 206224693 . C . PASS END=206224716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:20:9:0,20,327:0,20,255:9,0 chr1 206224717 . C . PASS END=206224728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 206224729 . A . PASS END=206224739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 206224740 . C . PASS END=206224810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 206224811 . T . PASS END=206224811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 206224812 . G . PASS END=206224832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,380:0,33,255:12,0 chr1 206224833 . C . PASS END=206224847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,304:0,27,255:9,0 chr1 206224848 . C . PASS END=206224860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr1 206224861 . C . PASS END=206224864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 206224865 . G . PASS END=206224865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 206224866 . C . PASS END=206224881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 206224882 . C . PASS END=206224882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 206224883 . A . PASS END=206224886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr1 206224887 . C . PASS END=206224887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 206224888 . A . PASS END=206224895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 206224896 . G . PASS END=206224944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,527:0,45,255:19,0 chr1 206224945 . G . PASS END=206224977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:21,0 chr1 206224978 . G . PASS END=206224978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 206224979 . G . PASS END=206224982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 206224983 . A . PASS END=206224983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 206224984 . G . PASS END=206224985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 206224986 . G . PASS END=206224989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 206224990 . C . PASS END=206224990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 206224991 . T . PASS END=206225027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:19,0 chr1 206225028 . A . PASS END=206225028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 206225029 . C . PASS END=206225034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr1 206225035 . T . PASS END=206225035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr1 206225036 . A . PASS END=206225054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,692:0,54,255:19,0 chr1 206225055 . G . PASS END=206225066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 206225067 . T . PASS END=206225122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,590:0,41,255:19,0 chr1 206225123 . A . PASS END=206225123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 206225124 . A . PASS END=206225141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,515:0,48,255:18,0 chr1 206225142 . A . PASS END=206225142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,501:0,37,255:17,0 chr1 206225143 . C . PASS END=206225144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 206225145 . G . PASS END=206225155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 206225156 . T . PASS END=206225157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 206225158 . G . PASS END=206225178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 206225179 . T . PASS END=206225180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 206225181 . G . PASS END=206225194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 206225195 . C . PASS END=206225195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,2 chr1 206225196 . T . PASS END=206225196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,800:0,6,255:22,2 chr1 206225197 . T . PASS END=206225197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 206225198 . C . PASS END=206225214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1000:0,75,255:26,0 chr1 206225215 . A . PASS END=206225274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1078:0,84,255:38,0 chr1 206225275 . A . PASS END=206225275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1311:0,75,255:36,0 chr1 206225276 . C . PASS END=206225280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1365:0,98,255:37,0 chr1 206225281 . A . PASS END=206225282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1325:0,62,255:37,0 chr1 206225283 . G . PASS END=206225352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1215:0,82,255:40,0 chr1 206225353 . G . PASS END=206225366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 206225367 . T . PASS END=206225367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 206225368 . G . PASS END=206225380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 206230808 . A . PASS END=206230829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr1 206230830 . C . PASS END=206230830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr1 206230831 . A . PASS END=206231029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1047:0,84,255:40,0 chr1 206231030 . C . PASS END=206231041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:31:0,74,1125:0,74,255:25,0 chr1 206231042 . G . PASS END=206231042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 206231043 . C . PASS END=206231064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,972:0,68,255:26,0 chr1 206231065 . A . PASS END=206231065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr1 206231066 . G . PASS END=206231066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 206231067 . G . PASS END=206231069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206231070 . C . PASS END=206231071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 206231072 . G . PASS END=206231072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:26,0 chr1 206231073 . G . PASS END=206231079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206231080 . G . PASS END=206231080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 206231081 . A . PASS END=206231086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 206231087 . C . PASS END=206231117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,68,255:25,0 chr1 206231118 . C . PASS END=206231142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,645:0,41,255:19,0 chr1 206239379 . T . PASS END=206239379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 206239380 . C . PASS END=206239387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1097:0,82,255:32,0 chr1 206239388 . C . PASS END=206239388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:30,0 chr1 206239389 . A . PASS END=206239391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:33,0 chr1 206239392 . T . PASS END=206239392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 206239393 . G . PASS END=206239521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:33:0,80,1148:0,80,255:40,1 chr1 206239522 . T . PASS END=206239522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1419:0,71,255:40,0 chr1 206239523 . T . PASS END=206239538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,102,1464:0,107,255:40,0 chr1 206239539 . T . PASS END=206239539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 206239540 . C . PASS END=206239560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:36,0 chr1 206239561 . A . PASS END=206239568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:32:0,63,945:0,96,255:24,0 chr1 206239569 . T . PASS END=206239579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:18,0 chr1 206240134 . C . PASS END=206240195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,112,1800:0,112,255:40,0 chr1 206241533 . G . PASS END=206241533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 206241534 . C . PASS END=206241542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 206241543 . G . PASS END=206241543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 206241544 . G . PASS END=206241564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr1 206241565 . C . PASS END=206241565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 206241566 . T . PASS END=206241567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 206241568 . T . PASS END=206241570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr1 206241571 . G . PASS END=206241571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 206241572 . T . PASS END=206241572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 206241573 . C . PASS END=206241576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:28,0 chr1 206241577 . G . PASS END=206241577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 206241578 . T . PASS END=206241581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,986:0,48,255:29,0 chr1 206241582 . C . PASS END=206241582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 206241583 . T . PASS END=206241583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 206241584 . T . PASS END=206241584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1131:0,90,255:30,0 chr1 206241585 . C . PASS END=206241587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,942:0,51,255:29,0 chr1 206241588 . C . PASS END=206241589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr1 206241590 . C . PASS END=206241591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1081:0,60,255:32,0 chr1 206241592 . T . PASS END=206241592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1062:0,44,255:30,0 chr1 206241593 . T . PASS END=206241593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:31,0 chr1 206241594 . G . PASS END=206241595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 206241596 . C . PASS END=206241598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 206241599 . C . PASS END=206241599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 206241600 . A . PASS END=206241600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 206241601 . G . PASS END=206241606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1188:0,63,255:31,0 chr1 206241607 . T . PASS END=206241607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:30,0 chr1 206241608 . G . PASS END=206241613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1180:0,60,255:31,0 chr1 206241614 . G . PASS END=206241648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:32,0 chr1 206241649 . G . PASS END=206241653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 206241654 . C . PASS END=206241654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:23,0 chr1 206241655 . A . PASS END=206241672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,838:0,61,255:25,0 chr1 206241673 . T . PASS END=206241676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 206243150 . C . PASS END=206243250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:32:0,96,1196:0,96,255:40,0 chr1 206243492 . T . PASS END=206243502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,165,255:40,0 chr1 206279551 . T . PASS END=206279562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr1 206279563 . A . PASS END=206279563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 206279564 . A . PASS END=206279582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,676:0,44,255:19,0 chr1 206279583 . G . PASS END=206279596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,861:0,63,255:26,0 chr1 206279597 . C . PASS END=206279621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,980:0,84,255:31,0 chr1 206279622 . T . PASS END=206279622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 206279623 . G . PASS END=206279626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 206279627 . G . PASS END=206279627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1061:0,38,255:29,0 chr1 206279628 . T . PASS END=206279628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 206279629 . G . PASS END=206279629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 206279630 . T . PASS END=206279649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 206279650 . C . PASS END=206279650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:26,0 chr1 206279651 . T . PASS END=206279652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 206279653 . C . PASS END=206279658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 206279659 . A . PASS END=206279659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206279660 . G . PASS END=206279687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 206279688 . C . PASS END=206279709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,635:0,40,255:19,0 chr1 206279974 . C . PASS END=206280026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,134,255:40,0 chr1 206280538 . T . PASS END=206280554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:24,0 chr1 206280555 . T . PASS END=206280555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr1 206280556 . T . PASS END=206280560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 206280561 . G . PASS END=206280572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:30,0 chr1 206280573 . A . PASS END=206280573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1028:0,65,255:31,0 chr1 206280574 . G . PASS END=206280735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1186:0,81,255:39,0 chr1 206280736 . C . PASS END=206280739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 206317577 . A . PASS END=206317644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,116,1621:0,116,255:40,0 chr1 206318311 . G . PASS END=206318321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:25,0 chr1 206318322 . G . PASS END=206318324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr1 206318325 . G . PASS END=206318325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr1 206318326 . G . PASS END=206318467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1147:0,80,255:40,0 chr1 206319101 . A . PASS END=206319186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1210:0,86,255:40,0 chr1 206319187 . C . PASS END=206319202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:25:0,60,900:0,75,255:24,0 chr1 206319203 . A . PASS END=206319203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 206319204 . C . PASS END=206319208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 206319209 . C . PASS END=206319218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr1 206320201 . A . PASS END=206320311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1266:0,95,255:40,0 chr1 206320312 . A . PASS END=206320319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:31:0,72,1080:0,93,255:25,0 chr1 206325223 . G . PASS END=206325422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:82:33:0,82,1186:0,82,255:40,1 chr1 206325423 . T . PASS END=206325437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:26,0 chr1 206327474 . T . PASS END=206327477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 206327478 . C . PASS END=206327478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 206327479 . C . PASS END=206327479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 206327480 . A . PASS END=206327487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:26,0 chr1 206327488 . G . PASS END=206327505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 206327506 . T . PASS END=206327506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 206327507 . T . PASS END=206327509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 206327510 . T C, 50.00 PASS DP=27;MQ=249.78;MQRankSum=3.775;ReadPosRankSum=4.318;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,16,0:0.593,0.000:27:6,11,0:5,5,0:47:85,0,48,572,385,958:255,0,255:11,0:5.0000e+01,7.8176e-05,5.0975e+01,4.5000e+02,4.2020e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,6,10:7,4,9,7 chr1 206327511 . G . PASS END=206327530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1031:0,81,255:31,0 chr1 206327531 . T . PASS END=206327531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 206327532 . T . PASS END=206327536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr1 206327537 . T . PASS END=206327537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 206327538 . G . PASS END=206327540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1135:0,93,255:31,0 chr1 206327541 . A . PASS END=206327547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:25,0 chr1 206327548 . A . PASS END=206327561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,853:0,68,255:23,0 chr1 206327562 . A . PASS END=206327562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 206327563 . C . PASS END=206327571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 206327572 . C . PASS END=206327572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 206327573 . T . PASS END=206327588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 206327589 . C . PASS END=206327596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,56,255:18,0 chr1 206328719 . C . PASS END=206328765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1041:0,87,255:40,0 chr1 206328766 . C . PASS END=206328783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,106,1721:0,106,255:40,0 chr1 206328784 . C . PASS END=206328784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:33:49:0,33,1342:0,33,255:40,0 chr1 206328785 . T . PASS END=206328802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,120,1800:0,131,255:40,0 chr1 206328803 . T C, 49.09 PASS DP=47;MQ=250.00;MQRankSum=5.831;ReadPosRankSum=4.483;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,21,0:0.447,0.000:47:7,14,0:19,7,0:48:84,0,50,751,901,1652:255,0,255:25,0:4.9092e+01,7.5329e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,12,14,7:17,9,11,10 chr1 206328804 . T . PASS END=206328840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,114,1621:0,114,255:40,0 chr1 206328841 . C . PASS END=206328860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,105,1575:0,129,255:40,0 chr1 206328962 . T . PASS END=206329060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,102,1530:0,116,255:40,0 chr1 206331021 . G . PASS END=206331033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr1 206331034 . G . PASS END=206331052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 206331053 . T . PASS END=206331056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 206331057 . T . PASS END=206331066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 206331067 . T . PASS END=206331076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 206331077 . C . PASS END=206331093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 206331094 . T . PASS END=206331094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,687:0,52,255:20,0 chr1 206331095 . C . PASS END=206331111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 206331112 . T . PASS END=206331112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,659:0,49,255:21,0 chr1 206331113 . C . PASS END=206331175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,740:0,62,255:24,0 chr1 206331176 . A . PASS END=206331210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,574:0,41,255:19,0 chr1 206331211 . C . PASS END=206331211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 206331212 . T . PASS END=206331228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 206516200 . G . PASS END=206516214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,629:0,45,255:17,0 chr1 206516215 . T . PASS END=206516223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:25,0 chr1 206516224 . A . PASS END=206516227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,933:0,75,255:26,0 chr1 206516228 . A . PASS END=206516260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,940:0,81,255:40,0 chr1 206516261 . C T, 33.30 PASS DP=40;MQ=35.38;MQRankSum=1.545;ReadPosRankSum=-0.128;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,14,0:0.350,0.000:40:13,6,0:13,8,0:32:68,0,37,168,168,168:255,0,255:26,0:3.3299e+01,2.4666e-03,4.0002e+01,1.6807e+02,2.0284e+02,1.7108e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,8,7,7:15,11,5,9 chr1 206516262 . G . PASS END=206516298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:40:0,90,1484:0,90,255:40,0 chr1 206516299 . C . PASS END=206516362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,162,255:40,0 chr1 206557369 . A . PASS END=206557431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:39:0,93,1395:0,112,255:40,0 chr1 206566046 . G . PASS END=206566047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,3:73:99:73:0,120,1800:0,170,255:40,0 chr1 206566048 . G . LowGQ END=206566048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,13:77:0:77:0,0,1939:255,0,255:40,0 chr1 206566049 . A . PASS END=206566085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:77:0,120,1800:0,232,255:40,0 chr1 206566086 . G . PASS END=206566261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:166,1:167:99:84:0,106,1800:0,106,255:40,0 chr1 206566902 . C . PASS END=206566903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:147,0:147:99:146:0,120,1800:0,255,255:40,0 chr1 206566904 . T C, 45.20 PASS DP=146;MQ=64.33;MQRankSum=-9.289;ReadPosRankSum=-1.165;FractionInformativeReads=0.993;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,100,0:0.690,0.000:145:25,54,0:20,46,0:38:80,0,36,3500,1579,5079:255,0,255:40,0:4.5201e+01,7.2927e-04,3.8610e+01,4.4853e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,18,48,52:29,16,52,48 chr1 206566905 . C . PASS END=206566941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:186,1:187:99:147:0,120,1800:0,255,255:40,0 chr1 206566942 . A . PASS END=206567030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:201,1:202:99:119:0,120,1800:0,255,255:40,0 chr1 206571324 . G . PASS END=206571387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,214,255:40,0 chr1 206571388 . C . PASS END=206571416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:62:0,117,1755:0,142,255:40,0 chr1 206574780 . C . PASS END=206574783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1053:0,71,255:26,0 chr1 206574784 . G . PASS END=206574809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:35,0 chr1 206574810 . C . PASS END=206574810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:34,0 chr1 206574811 . T . PASS END=206575004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:35:0,102,1311:0,105,255:40,0 chr1 206578608 . G . LowGQ END=206578683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,39:0,0,61:3,0 chr1 206578684 . C . LowGQ END=206578709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,47:0,0,47:2,0 chr1 206579736 . G . PASS END=206579744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 206579745 . A . PASS END=206579745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:20,0 chr1 206579746 . C . PASS END=206579751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr1 206579752 . A . PASS END=206579754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 206579755 . C . PASS END=206579755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 206579756 . C . PASS END=206579760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr1 206579761 . T . PASS END=206579765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 206579766 . A . PASS END=206579766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,817:0,75,255:28,0 chr1 206579767 . C . PASS END=206579797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:34,0 chr1 206579798 . T C, 4.18 DRAGENSnpHardQUAL DP=34;MQ=14.00;MQRankSum=4.881;ReadPosRankSum=3.097;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,20,0:0.588,0.000:34:3,8,0:11,12,0:4:37,0,12,658,501,1158:255,0,255:12,0:4.1846e+00,2.2235e+00,1.7177e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,4,20,0:5,9,8,12 chr1 206579799 . G . PASS END=206579813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:33:0,89,1271:0,89,255:33,0 chr1 206579814 . T . PASS END=206579814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr1 206579815 . T . PASS END=206579835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:33:0,93,1395:0,99,255:39,0 chr1 206579836 . A . PASS END=206579898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,101,1434:0,101,255:40,0 chr1 206579899 . C . PASS END=206579935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:60:0,120,1800:0,156,255:40,0 chr1 206579936 . A G, 26.12 PASS DP=79;MQ=19.16;MQRankSum=3.901;ReadPosRankSum=1.119;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,31,0:0.392,0.000:79:27,13,0:21,18,0:25:61,0,31,1076,1635,2711:255,0,255:40,0:2.6116e+01,1.2362e-02,3.4012e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,21,18,13:32,16,14,17 chr1 206579937 . A . PASS END=206579957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:78:0,120,1800:0,217,255:40,0 chr1 206589249 . A . PASS END=206589333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,140,255:40,0 chr1 206592725 . G . PASS END=206592752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,136,255:40,0 chr1 206594601 . G . PASS END=206594625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:34:0,93,1395:0,102,255:39,0 chr1 206603512 . G . PASS END=206603572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,197,255:40,0 chr1 206610315 . G . PASS END=206610392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,101,1784:0,101,255:40,0 chr1 206611314 . G . PASS END=206611332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1368:0,95,255:38,0 chr1 206611333 . G . PASS END=206611333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:38,0 chr1 206611334 . G . PASS END=206611440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:30:0,84,1260:0,90,255:40,0 chr1 206611441 . C . PASS END=206611443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr1 206611444 . C . PASS END=206611444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:23,0 chr1 206611445 . G . PASS END=206611448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:24,0 chr1 206613326 . C . PASS END=206613431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:83:40:0,83,1406:0,83,255:40,0 chr1 206619421 . T . PASS END=206619422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 206619423 . T . PASS END=206619423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 206619424 . A . PASS END=206619429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:19,0 chr1 206619430 . G . PASS END=206619455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:26,0 chr1 206619456 . C . PASS END=206619464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:29,0 chr1 206619465 . T . PASS END=206619465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 206619466 . C . PASS END=206619470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:31,0 chr1 206619471 . T . PASS END=206619471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:30,0 chr1 206619472 . C . PASS END=206619472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 206619473 . T . PASS END=206619474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 206619475 . C . PASS END=206619475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:30,0 chr1 206619476 . T . PASS END=206619476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 206619477 . T . PASS END=206619477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 206619478 . C . PASS END=206619478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1069:0,38,255:29,0 chr1 206619479 . G . PASS END=206619479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 206619480 . G . PASS END=206619494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1257:0,99,255:36,0 chr1 206619495 . C . PASS END=206619495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:33,0 chr1 206619496 . A . PASS END=206619542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1288:0,105,255:37,0 chr1 206619543 . A . PASS END=206619543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:34,0 chr1 206619544 . G . PASS END=206619578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:36:0,82,1328:0,82,255:38,0 chr1 206619579 . T . PASS END=206619580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:37,0 chr1 206619581 . T . PASS END=206619581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1404:0,87,255:37,0 chr1 206619582 . T . PASS END=206619589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:38:0,62,1343:0,62,255:37,0 chr1 206619590 . C . PASS END=206619607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,97,255:35,0 chr1 206619608 . C . PASS END=206619619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,74,255:25,0 chr1 206619620 . A . PASS END=206619620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 206619621 . G . PASS END=206619621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 206619622 . A . PASS END=206619622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 206619623 . G . PASS END=206619632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:22,0 chr1 206619633 . T . PASS END=206619639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:17,0 chr1 206619640 . T . PASS END=206619640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:14,0 chr1 206619641 . T . PASS END=206619645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:20:0,45,675:0,60,255:16,0 chr1 206623731 . T . PASS END=206623810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1327:0,90,255:39,0 chr1 206626545 . G . PASS END=206626550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:18,0 chr1 206626551 . G . PASS END=206626551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 206626552 . A . PASS END=206626556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr1 206626557 . A . PASS END=206626557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 206626558 . T . PASS END=206626558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr1 206626559 . C . PASS END=206626559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 206626560 . G . PASS END=206626562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 206626563 . G . PASS END=206626569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 206626570 . C . PASS END=206626572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 206626573 . A . PASS END=206626573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:18,0 chr1 206626574 . G . PASS END=206626575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 206626576 . T . PASS END=206626576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,688:0,44,255:19,0 chr1 206626577 . T . PASS END=206626578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr1 206626579 . A . PASS END=206626579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 206626580 . C . PASS END=206626600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,898:0,62,255:24,0 chr1 206626601 . A . PASS END=206626601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 206626602 . G . PASS END=206626605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 206626606 . T . PASS END=206626606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 206626607 . G A, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,8,0:0,17,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,13:0,0,15,10 chr1 206626608 . T . PASS END=206626622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 206626623 . G . PASS END=206626623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 206626624 . C . PASS END=206626641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:23,0 chr1 206626642 . A . PASS END=206626642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 206626643 . G . PASS END=206626644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 206626645 . G . PASS END=206626656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 206626657 . A . PASS END=206626657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 206626658 . C . PASS END=206626665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 206626666 . A . PASS END=206626666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr1 206626667 . A . PASS END=206626670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 206626671 . C . PASS END=206626671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 206626672 . G . PASS END=206626677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 206626678 . A . PASS END=206626696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,759:0,47,255:19,0 chr1 206626697 . C . PASS END=206626697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 206626698 . C . PASS END=206626723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 206626724 . C . PASS END=206626726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:13,0 chr1 206627490 . G . PASS END=206627502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,139,255:40,0 chr1 206628224 . C . PASS END=206628226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 206628227 . G . PASS END=206628227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 206628228 . G . PASS END=206628233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 206628234 . G . PASS END=206628234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 206628235 . T . PASS END=206628235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 206628236 . C . PASS END=206628249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1133:0,84,255:31,0 chr1 206628250 . G . PASS END=206628250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 206628251 . C . PASS END=206628255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 206628256 . A . PASS END=206628256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:28,0 chr1 206628257 . G . PASS END=206628263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1162:0,83,255:30,0 chr1 206628264 . A . PASS END=206628264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1003:0,66,255:29,0 chr1 206628265 . T . PASS END=206628342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:36,0 chr1 206628343 . C . PASS END=206628359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,923:0,64,255:25,0 chr1 206628360 . A . PASS END=206628360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 206628361 . A . PASS END=206628369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 206628370 . A . PASS END=206628370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr1 206628371 . G . PASS END=206628373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 206628374 . A . PASS END=206628374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 206629119 . C . PASS END=206629137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,752:0,63,255:22,0 chr1 206631717 . C . PASS END=206631755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,143,255:40,0 chr1 206631969 . G . PASS END=206631973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 206631974 . G . PASS END=206631974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,883:0,31,255:23,0 chr1 206631975 . G . PASS END=206631986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,879:0,62,255:26,0 chr1 206631987 . A . PASS END=206631988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 206631989 . C . PASS END=206631991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 206631992 . G . PASS END=206632007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 206632008 . T . PASS END=206632008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 206632009 . T . PASS END=206632011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr1 206632012 . C . PASS END=206632012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 206632013 . G . PASS END=206632014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 206632015 . A . PASS END=206632015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 206632016 . G . PASS END=206632018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 206632019 . A . PASS END=206632034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,74,255:26,0 chr1 206632035 . C . PASS END=206632042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr1 206632043 . T . PASS END=206632043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 206632044 . G . PASS END=206632048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 206632049 . A . PASS END=206632049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 206632050 . C . PASS END=206632074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:30,0 chr1 206632075 . A . PASS END=206632081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 206632082 . G . PASS END=206632086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 206632087 . T . PASS END=206632087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 206632088 . C . PASS END=206632102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1133:0,84,255:30,0 chr1 206632103 . T . PASS END=206632104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 206632105 . A . PASS END=206632245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr1 206632246 . A . PASS END=206632246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:34,0 chr1 206632247 . A . PASS END=206632280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:36:0,80,1215:0,80,255:36,0 chr1 206632281 . G . PASS END=206632281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 206632282 . G . PASS END=206632286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 206632287 . T . PASS END=206632291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,74,255:26,0 chr1 206632292 . A . PASS END=206632292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:19,0 chr1 206632293 . G . PASS END=206632293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 206632931 . A . PASS END=206633020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,141,255:40,0 chr1 206634382 . G . PASS END=206634384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr1 206634385 . A . PASS END=206634385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 206634386 . T . PASS END=206634397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:12,0 chr1 206634398 . T . PASS END=206634398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 206634399 . G . PASS END=206634405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr1 206634406 . G . PASS END=206634406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 206634407 . C . PASS END=206634407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 206634408 . C . PASS END=206634409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 206634410 . T . PASS END=206634410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 206634411 . G . PASS END=206634411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 206634412 . A . PASS END=206634414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 206634415 . G . PASS END=206634415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 206634416 . A . PASS END=206634437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:16,0 chr1 206634438 . G . PASS END=206634449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 206634450 . A . PASS END=206634450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 206634451 . C . PASS END=206634454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 206634455 . C . PASS END=206634461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 206634462 . C . PASS END=206634462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 206634463 . G . PASS END=206634463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 206634464 . T . PASS END=206634497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 206634498 . C . PASS END=206634501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 206634502 . G . PASS END=206634514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr1 206634515 . C . PASS END=206634531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:18,0 chr1 206634532 . C . PASS END=206634550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,691:0,60,255:21,0 chr1 206634551 . T . PASS END=206634551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 206634552 . C . PASS END=206634563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 206634564 . G . PASS END=206634564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 206634565 . C . PASS END=206634570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 206634571 . T . PASS END=206634594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 206634595 . G . PASS END=206634595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr1 206634596 . G . PASS END=206634597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 206634598 . G . PASS END=206634610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 206634611 . C . PASS END=206634611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 206634612 . C . PASS END=206634615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 206634616 . C . PASS END=206634616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:28,0 chr1 206634617 . G . PASS END=206634623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 206634624 . C . PASS END=206634624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 206634625 . A . PASS END=206634627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 206634628 . T . PASS END=206634628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 206634629 . C . PASS END=206634629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 206634630 . T . PASS END=206634630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 206634631 . G . PASS END=206634633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 206634634 . A . PASS END=206634634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 206634635 . A . PASS END=206634647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 206634648 . G . PASS END=206634648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 206634649 . G . PASS END=206634655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1155:0,90,255:30,0 chr1 206634656 . C . PASS END=206634656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 206634657 . A . PASS END=206634663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 206634664 . A . PASS END=206634664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 206634665 . C . PASS END=206634667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 206634668 . G . PASS END=206634668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 206634669 . G . PASS END=206634672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 206634673 . A . PASS END=206634676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 206634677 . C . PASS END=206634678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 206634679 . A . PASS END=206634679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 206634680 . C . PASS END=206634680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206634681 . T . PASS END=206634681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 206634682 . G . PASS END=206634698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:30,0 chr1 206634699 . T . PASS END=206634700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr1 206634701 . C . PASS END=206634708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 206634709 . C . PASS END=206634718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 206634719 . A . PASS END=206634719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206634720 . C . PASS END=206634734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,925:0,64,255:25,0 chr1 206634735 . A . PASS END=206634735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 206634736 . C . PASS END=206634736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 206634737 . A . PASS END=206634737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 206634738 . G . PASS END=206634742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 206634743 . C . PASS END=206634747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 206634748 . A . PASS END=206634754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 206634755 . G . PASS END=206634757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 206634758 . C . PASS END=206634765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 206646571 . A . PASS END=206646573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 206646574 . C . LowGQ END=206646574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:12,0 chr1 206646575 . A . PASS END=206646580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 206646581 . C . PASS END=206646586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 206646587 . A . PASS END=206646587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr1 206646588 . T . PASS END=206646635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:17,0 chr1 206646636 . T . PASS END=206646636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 206646637 . G . PASS END=206646653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,613:0,51,255:17,0 chr1 206646654 . C . PASS END=206646657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 206647674 . A . PASS END=206647674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 206647675 . A . PASS END=206647675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 206647676 . A . PASS END=206647692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,856:0,64,255:26,0 chr1 206647693 . C . PASS END=206647694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:27,0 chr1 206647695 . G . PASS END=206647698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 206647699 . A . PASS END=206647699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 206647700 . G . PASS END=206647701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 206647702 . T . PASS END=206647702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 206647703 . C . PASS END=206647704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 206647705 . T . PASS END=206647741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1163:0,80,255:40,0 chr1 206647742 . A G, 169.93 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,17,0:0,24,0:120:208,123,0,1550,123,1550:255,126,0:0,0:1.6993e+02,1.1993e+02,0.0000e+00,4.5000e+02,1.5470e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,21:0,0,24,17 chr1 206647743 . G . PASS END=206647786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1382:0,87,255:40,0 chr1 206647787 . T C, 164.36 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,17,0:0,22,0:114:202,117,0,302,302,302:255,117,0:0,0:1.6436e+02,1.1436e+02,0.0000e+00,2.9913e+02,3.3390e+02,3.0214e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,12,27:0,0,24,15 chr1 206647788 . G . PASS END=206647814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1208:0,97,255:36,0 chr1 206648208 . G . PASS END=206648330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:27:0,81,1031:0,81,255:40,0 chr1 206648331 . T . PASS END=206648331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 206648332 . G . PASS END=206648340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,108,255:30,0 chr1 206648341 . A . PASS END=206648342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 206648343 . C . PASS END=206648374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,71,255:26,0 chr1 206648375 . A . PASS END=206648375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 206648376 . G . PASS END=206648377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 206648378 . G A, 119.23 PASS DP=24;MQ=249.35;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:69:157,72,0,928,72,928:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,17:0,0,14,10 chr1 206648379 . G . PASS END=206648384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 206648385 . C . PASS END=206648410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 206648411 . G . PASS END=206648415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 206648416 . T . PASS END=206648426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,495:0,32,255:12,0 chr1 206648427 . A . PASS END=206648427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 206648428 . A . PASS END=206648438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 206648439 . T . PASS END=206648439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 206648440 . A . PASS END=206648441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:11,0 chr1 206649524 . T . PASS END=206649542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,795:0,66,255:24,0 chr1 206649543 . G . PASS END=206649543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 206649544 . C . PASS END=206649553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 206649554 . G . PASS END=206649583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1127:0,83,255:34,0 chr1 206649584 . A . PASS END=206649584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:34,0 chr1 206649585 . C . PASS END=206649649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:37:0,88,1528:0,88,255:40,2 chr1 206649650 . G . PASS END=206649650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1445:0,60,255:37,2 chr1 206649651 . G . PASS END=206649681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:37:0,88,1395:0,88,255:38,0 chr1 206649682 . G . PASS END=206649683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,95,255:26,0 chr1 206649684 . C . PASS END=206649687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,98,255:28,0 chr1 206649688 . G . PASS END=206649688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 206649689 . G . PASS END=206649689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 206649690 . G . PASS END=206649705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:26:0,63,945:0,78,255:25,0 chr1 206650021 . C . PASS END=206650025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,837:0,66,255:26,0 chr1 206650026 . C . PASS END=206650042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,994:0,81,255:36,0 chr1 206650043 . C . PASS END=206650043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:35,0 chr1 206650044 . G . PASS END=206650181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:36:0,81,1215:0,101,255:40,0 chr1 206651092 . G . PASS END=206651132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,886:0,72,255:26,0 chr1 206651133 . G . PASS END=206651147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 206651148 . A . PASS END=206651148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:25,0 chr1 206651149 . G . PASS END=206651156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 206651157 . C . PASS END=206651157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 206651158 . C . PASS END=206651162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1163:0,90,255:30,0 chr1 206651163 . A . PASS END=206651163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 206651164 . G . PASS END=206651164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 206651165 . T . PASS END=206651175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,71,255:23,0 chr1 206651176 . C . PASS END=206651178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 206651179 . C . PASS END=206651183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 206651184 . T . PASS END=206651202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 206651503 . G . PASS END=206651503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 206651504 . G . PASS END=206651532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,807:0,66,255:24,0 chr1 206651533 . G . PASS END=206651533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 206651534 . G . PASS END=206651636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,945:0,62,255:26,0 chr1 206651637 . T . PASS END=206651644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 206651645 . G . PASS END=206651653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:20:0,36,540:0,60,255:13,0 chr1 206651654 . C . PASS END=206651657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,543:0,42,255:14,0 chr1 206651658 . A . PASS END=206651658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 206651659 . C . PASS END=206651664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 206651665 . T . PASS END=206651665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr1 206651666 . A . PASS END=206651670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 206651671 . T . PASS END=206651671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 206651672 . G . PASS END=206651677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 206651678 . A . PASS END=206651682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 206652286 . G . PASS END=206652315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1075:0,83,255:36,0 chr1 206652316 . G . PASS END=206652316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:34,0 chr1 206652317 . C . PASS END=206652432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1141:0,82,255:40,0 chr1 206652433 . C . PASS END=206652449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:25:0,63,945:0,75,255:24,0 chr1 206652450 . T . PASS END=206652471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 206652472 . G . PASS END=206652475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 206652476 . C . PASS END=206652476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 206653213 . C . PASS END=206653223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:33,0 chr1 206653224 . G . PASS END=206653224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr1 206653225 . T . PASS END=206653277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:33,0 chr1 206653365 . G . PASS END=206653367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 206653368 . G . PASS END=206653437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,513:0,42,255:17,0 chr1 206653438 . G . PASS END=206653446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 206653447 . A . PASS END=206653456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:11:0,27,405:0,33,255:9,0 chr1 206653790 . G . PASS END=206653790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1233:0,96,255:32,0 chr1 206653791 . G . PASS END=206653793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:32,0 chr1 206653794 . G . PASS END=206653794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr1 206653795 . T . PASS END=206653796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1157:0,60,255:33,0 chr1 206653797 . C . PASS END=206653799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1272:0,102,255:34,0 chr1 206653800 . C . PASS END=206653800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr1 206653801 . A . PASS END=206653801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr1 206653802 . G . PASS END=206653804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr1 206653805 . C . PASS END=206653806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1257:0,99,255:34,0 chr1 206653807 . C . PASS END=206653807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 206653808 . A . PASS END=206653808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:33,0 chr1 206653809 . T . PASS END=206653811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:36,0 chr1 206653812 . A . PASS END=206653876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:37:0,85,1332:0,85,255:40,0 chr1 206654268 . A . PASS END=206654268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,178,255:40,0 chr1 206657802 . T . PASS END=206657802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 206658334 . G . PASS END=206658370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,894:0,62,255:25,0 chr1 206658371 . C . PASS END=206658371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 206658372 . T . PASS END=206658391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 206658392 . A . PASS END=206658392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,751:0,14,255:20,0 chr1 206658393 . G . PASS END=206658393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 206658394 . G . PASS END=206658397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 206658398 . A . PASS END=206658409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,721:0,50,255:19,0 chr1 206658531 . C . PASS END=206658643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1055:0,84,255:40,0 chr1 206661251 . C . PASS END=206661252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 206661253 . T . PASS END=206661253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:29,0 chr1 206661254 . C . PASS END=206661263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 206661264 . C . PASS END=206661264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 206661265 . A . PASS END=206661272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1140:0,93,255:31,0 chr1 206661273 . T . PASS END=206661273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 206661274 . T . PASS END=206661283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1172:0,93,255:31,0 chr1 206661284 . G . PASS END=206661284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:28,0 chr1 206661285 . A . PASS END=206661288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr1 206661289 . T . PASS END=206661314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,942:0,68,255:27,0 chr1 206661315 . A . PASS END=206661315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:20,0 chr1 206661316 . G . PASS END=206661317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 206661318 . A . PASS END=206661327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,720:0,42,255:18,0 chr1 206664152 . G . PASS END=206664191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,117,1755:0,144,255:40,0 chr1 206664981 . G . PASS END=206665018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1353:0,101,255:40,0 chr1 206665019 . T . PASS END=206665019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1227:0,56,255:35,0 chr1 206665020 . G . PASS END=206665057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:36:0,91,1219:0,91,255:40,0 chr1 206665058 . T . PASS END=206665058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1211:0,56,255:30,0 chr1 206665059 . A . PASS END=206665060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,95,255:31,0 chr1 206665061 . T . PASS END=206665061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:29,0 chr1 206665062 . C . PASS END=206665073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,92,255:31,0 chr1 206665074 . G . PASS END=206665074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:25,0 chr1 206665075 . A . PASS END=206665075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 206665076 . G . PASS END=206665082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,83,255:26,0 chr1 206666356 . G . PASS END=206666452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,99,1450:0,104,255:40,0 chr1 206666599 . C . PASS END=206666625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,868:0,61,255:26,0 chr1 206666626 . C . PASS END=206666641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:30,0 chr1 206666642 . A . PASS END=206666642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 206666643 . G . PASS END=206666661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1141:0,90,255:32,0 chr1 206666662 . C . PASS END=206666663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 206666664 . T . PASS END=206666670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 206666671 . G . PASS END=206666674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr1 206666675 . C . PASS END=206666678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 206666679 . C . PASS END=206666695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,945:0,66,255:26,0 chr1 206666696 . A . PASS END=206666696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 206666697 . G . PASS END=206666705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:22,0 chr1 206666706 . T . PASS END=206666706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 206666707 . C . PASS END=206666711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 206667253 . C . PASS END=206667254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 206667255 . T . PASS END=206667257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 206667258 . A . PASS END=206667258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 206667259 . A . PASS END=206667295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1039:0,84,255:34,0 chr1 206667296 . C . PASS END=206667296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr1 206667297 . T . PASS END=206667314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1227:0,93,255:34,0 chr1 206667315 . T . PASS END=206667315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 206667316 . C . PASS END=206667322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 206667323 . C . PASS END=206667323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:26,0 chr1 206667324 . G . PASS END=206667324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 206669445 . G . PASS END=206669478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,118,1800:0,118,255:40,0 chr1 206680936 . A . PASS END=206680938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 206680939 . G . PASS END=206680945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr1 206680946 . C . PASS END=206680946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 206680947 . G . PASS END=206680947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 206680948 . T . PASS END=206680982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 206680983 . A C, 50.00 PASS DP=12;MQ=245.63;MQRankSum=1.932;ReadPosRankSum=1.239;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,8,0:0.667,0.000:12:3,5,0:1,3,0:47:85,0,47,286,143,429:252,0,119:4,0:5.0000e+01,8.6460e-05,5.0048e+01,2.8606e+02,1.7788e+02,4.3220e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,6,2:2,2,5,3 chr1 206680984 . T . PASS END=206681003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 206681004 . C . PASS END=206681004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 206681005 . T . PASS END=206681007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:12,0 chr1 206681008 . C . PASS END=206681008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 206681009 . T . PASS END=206681009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 206681010 . A . PASS END=206681010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 206681011 . C . PASS END=206681020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 206681021 . G . PASS END=206681051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 206681052 . C . PASS END=206681052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 206681053 . C . PASS END=206681056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 206681057 . C . PASS END=206681077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 206681078 . C . PASS END=206681078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:14,0 chr1 206681079 . G . PASS END=206681091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,495:0,31,255:13,0 chr1 206681092 . G . PASS END=206681092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 206681093 . C . PASS END=206681109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 206681110 . G . PASS END=206681117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 206681118 . C . PASS END=206681128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,590:0,45,255:16,0 chr1 206681129 . C . PASS END=206681152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 206681153 . C . LowGQ END=206681153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:9,0 chr1 206681154 . G . PASS END=206681158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 206681159 . G . LowGQ END=206681159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 206681160 . G . PASS END=206681162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 206681163 . C . PASS END=206681164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 206681165 . C . PASS END=206681203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 206681204 . G . PASS END=206681214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 206681215 . C . PASS END=206681215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 206681216 . G . PASS END=206681235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 206681236 . C . PASS END=206681236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 206681237 . G . PASS END=206681242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 206681243 . T . PASS END=206681243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 206681244 . G . PASS END=206681248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:19,0 chr1 206681249 . G . PASS END=206681259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 206681260 . C . PASS END=206681260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 206681261 . A . PASS END=206681277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,791:0,66,255:23,0 chr1 206681278 . G . PASS END=206681279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 206681280 . C . PASS END=206681298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr1 206681299 . G . PASS END=206681358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:32,0 chr1 206681359 . C . PASS END=206681379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:26:0,63,945:0,68,255:26,0 chr1 206681380 . C . PASS END=206681380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr1 206681381 . T . PASS END=206681385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 206681386 . T . PASS END=206681392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,63,255:18,0 chr1 206691721 . A . PASS END=206691723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 206691724 . A . PASS END=206691724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 206691725 . C . PASS END=206691741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:32,0 chr1 206691742 . A . PASS END=206691742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 206691743 . A . PASS END=206691759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1164:0,96,255:32,0 chr1 206691760 . T . PASS END=206691760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:30,0 chr1 206691761 . T . PASS END=206691777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1141:0,82,255:31,0 chr1 206691778 . C . PASS END=206691797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,61,255:26,0 chr1 206691798 . C . PASS END=206691801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:18,0 chr1 206691802 . C . PASS END=206691823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,793:0,69,255:24,0 chr1 206691824 . C . PASS END=206691824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 206691825 . C . PASS END=206691833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,825:0,72,255:24,0 chr1 206691834 . C . PASS END=206691855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:18:0,46,706:0,46,255:17,0 chr1 206691856 . A . PASS END=206691857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,543:0,34,255:15,0 chr1 206691858 . C . PASS END=206691863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 206691864 . C . PASS END=206691864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:14,0 chr1 206691865 . C . PASS END=206691870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:15,0 chr1 206691871 . G . PASS END=206691877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 206711501 . A . PASS END=206711609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,86,255:40,0 chr1 206711610 . G . PASS END=206711622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:24,0 chr1 206730902 . A . PASS END=206730912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,995:0,84,255:31,0 chr1 206730913 . C . PASS END=206730913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 206730914 . A . PASS END=206730917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 206730918 . G . PASS END=206730918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:30,0 chr1 206730919 . C . PASS END=206731021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:33:0,82,955:0,82,255:40,0 chr1 206754433 . T . PASS END=206754494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,160,255:40,0 chr1 206756601 . A . PASS END=206756711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,117,1527:0,118,255:40,0 chr1 206757719 . A . PASS END=206757722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 206757723 . A . PASS END=206757723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 206757724 . A . PASS END=206757731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr1 206757732 . C . PASS END=206757746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:29,0 chr1 206757747 . T . PASS END=206757747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 206757748 . C . PASS END=206757749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 206757750 . A . PASS END=206757750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:27,0 chr1 206757751 . A . PASS END=206757755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 206757756 . A . PASS END=206757756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 206757757 . T . PASS END=206757762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1035:0,87,255:29,0 chr1 206757763 . A . PASS END=206757764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 206757765 . T . PASS END=206757765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:26,0 chr1 206757766 . C . PASS END=206757766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 206757767 . C . PASS END=206757768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 206757769 . G . PASS END=206757771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 206757772 . G . PASS END=206757780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 206757781 . G . PASS END=206757781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 206757782 . G . PASS END=206757782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 206757783 . T . PASS END=206757783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 206757784 . G . PASS END=206757805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1048:0,87,255:31,0 chr1 206757806 . T . PASS END=206757806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 206757807 . C . PASS END=206758039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:31:0,83,1192:0,83,255:40,0 chr1 206758040 . C . PASS END=206758076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,114,1710:0,125,255:40,0 chr1 206758077 . T A, 41.00 PASS DP=47;MQ=250.00;MQRankSum=5.557;ReadPosRankSum=3.895;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,16,0:0.340,0.000:47:15,8,0:16,8,0:41:76,0,50,572,1089,1661:255,0,255:25,0:4.0996e+01,3.6708e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,15,8,8:18,13,6,10 chr1 206758078 . C . PASS END=206758081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,117,1755:0,122,255:39,0 chr1 206758512 . T . PASS END=206758663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1114:0,80,255:40,0 chr1 206760158 . T . PASS END=206760160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr1 206760161 . G . PASS END=206760296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,92,255:40,0 chr1 206760297 . G . PASS END=206760297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:26,0 chr1 206760298 . C . PASS END=206760298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 206760299 . A . PASS END=206760300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 206760301 . A . PASS END=206760301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,984:0,49,255:22,0 chr1 206760302 . C . PASS END=206760304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:30:0,69,1035:0,90,255:25,0 chr1 206760305 . G . PASS END=206760305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:20,0 chr1 206760306 . G . PASS END=206760310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:23,0 chr1 206765107 . T . PASS END=206765177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,151,255:40,0 chr1 206766968 . C . PASS END=206766969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1294:0,89,255:34,0 chr1 206766970 . A . PASS END=206766970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:33,0 chr1 206766971 . G . PASS END=206767139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1215:0,83,255:40,0 chr1 206767140 . C . PASS END=206767142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 206769067 . C . PASS END=206769187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1101:0,90,255:40,0 chr1 206770450 . C . PASS END=206770450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 206770451 . T . PASS END=206770451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 206770452 . G . PASS END=206770455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 206770456 . A . PASS END=206770456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 206770457 . G . PASS END=206770457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 206770458 . A . PASS END=206770458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:28,0 chr1 206770459 . A . PASS END=206770545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1093:0,80,255:40,0 chr1 206772357 . T . PASS END=206772446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,137,255:40,0 chr1 206772817 . T . PASS END=206772820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 206772821 . G . PASS END=206772821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 206772822 . G . PASS END=206772828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 206772829 . T . PASS END=206772863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,62,255:26,0 chr1 206772864 . G . PASS END=206772878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 206772879 . A . PASS END=206772879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:27,0 chr1 206772880 . T . PASS END=206772886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr1 206772887 . G . PASS END=206772887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 206772888 . G . PASS END=206772900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1178:0,83,255:30,0 chr1 206772901 . T . PASS END=206772901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 206772902 . C . PASS END=206772904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 206772905 . T . PASS END=206772951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 206772952 . A . PASS END=206772952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 206772953 . C . PASS END=206772963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,853:0,66,255:22,0 chr1 206772964 . A . PASS END=206772964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 206772965 . T . PASS END=206772966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 206773087 . C . PASS END=206773089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 206773090 . G . PASS END=206773149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1072:0,82,255:38,0 chr1 206773150 . A . PASS END=206773160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:30:0,75,1125:0,90,255:26,0 chr1 206773161 . C . PASS END=206773161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 206773162 . T . PASS END=206773162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 206773163 . G . PASS END=206773169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,910:0,81,255:27,0 chr1 206773170 . T . PASS END=206773170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 206773171 . T . PASS END=206773175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 206773176 . C . PASS END=206773190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr1 206773617 . C . PASS END=206773621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,120,1800:0,123,255:40,0 chr1 206773622 . T . PASS END=206773658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,110,1551:0,110,255:40,0 chr1 206773659 . A G, 185.44 PASS DP=46;MQ=249.66;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,20,0:0,26,0:135:223,138,0,1768,138,1768:255,138,0:0,0:1.8544e+02,1.3544e+02,0.0000e+00,4.5000e+02,1.7021e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,25:0,0,19,27 chr1 206773660 . G . PASS END=206773662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 206774180 . T . PASS END=206774185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 206774186 . A . PASS END=206774186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 206774187 . C . PASS END=206774238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:32:0,93,1395:0,96,255:40,0 chr1 206774239 . A . PASS END=206774239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1333:0,43,255:34,0 chr1 206774240 . G . PASS END=206774258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1413:0,104,255:36,0 chr1 206775690 . C . PASS END=206775807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,113,1535:0,113,255:40,0 chr1 206776305 . C . PASS END=206776329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,746:0,66,255:25,0 chr1 206776330 . G . PASS END=206776335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 206776336 . G . PASS END=206776336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 206776337 . T . PASS END=206776340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr1 206776341 . G . PASS END=206776342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 206776343 . C . PASS END=206776346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 206776347 . T . PASS END=206776347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 206776348 . G . PASS END=206776393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1147:0,90,255:31,0 chr1 206776394 . G . PASS END=206776396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 206776397 . T . PASS END=206776402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 206776403 . A . PASS END=206776437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:26,0 chr1 206776438 . G . PASS END=206776438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 206776439 . T . PASS END=206776445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 206776446 . T . PASS END=206776446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:19,0 chr1 206776447 . G . PASS END=206776447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 206776448 . T . PASS END=206776448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 206776449 . C . PASS END=206776465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 206776466 . T . PASS END=206776467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 206776468 . C . PASS END=206776472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 206776473 . G . PASS END=206776473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:20,0 chr1 206776474 . G . PASS END=206776554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,520:0,41,255:20,0 chr1 206776555 . C . PASS END=206776558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 206778753 . C . PASS END=206778845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:30:0,90,1111:0,90,255:40,0 chr1 206778846 . A . PASS END=206778849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:38:0,78,1170:0,114,255:26,0 chr1 206778850 . C . PASS END=206778852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 206778853 . C . PASS END=206778856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,92,255:26,0 chr1 206778857 . G . PASS END=206778858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206778859 . C . PASS END=206778859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:25,0 chr1 206778860 . T . PASS END=206778860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206781589 . C . PASS END=206781673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1063:0,84,255:40,0 chr1 206781674 . T . PASS END=206781679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 206782729 . C . PASS END=206782802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,153,255:40,0 chr1 206782803 . A . PASS END=206782812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:66:49:0,66,990:0,126,255:25,0 chr1 206784537 . C . PASS END=206784569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,872:0,62,255:27,0 chr1 206784570 . G . PASS END=206784573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 206784574 . G . PASS END=206784574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 206784575 . G . PASS END=206784645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:31:0,93,1141:0,93,255:40,0 chr1 206784646 . C . PASS END=206784682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1429:0,84,255:39,0 chr1 206784683 . C T, 49.29 PASS DP=43;MQ=248.63;MQRankSum=4.928;ReadPosRankSum=3.159;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:9,10,0:14,9,0:48:84,0,50,680,786,1465:255,0,255:20,0:4.9287e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,8,11:14,9,7,12 chr1 206784684 . C . PASS END=206784689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,105,1575:0,109,255:35,0 chr1 206784690 . T . PASS END=206784691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,1 chr1 206784692 . G . PASS END=206784707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:35,0 chr1 206784708 . C . PASS END=206784720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr1 206784721 . C . PASS END=206784727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr1 206785640 . C . PASS END=206785642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 206785643 . T . PASS END=206785643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 206785644 . C . PASS END=206785695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:34,0 chr1 206809049 . A . PASS END=206809049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 206809050 . T . PASS END=206809058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 206809059 . C . PASS END=206809062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 206809063 . T . PASS END=206809072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 206809073 . G . PASS END=206809073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 206809074 . G . PASS END=206809083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 206809084 . T . PASS END=206809084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 206809085 . G . PASS END=206809123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,869:0,69,255:24,0 chr1 206809124 . A . PASS END=206809124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 206809125 . G . PASS END=206809125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 206810297 . A . PASS END=206810313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:78:0,120,1800:0,224,255:40,0 chr1 206810995 . G . PASS END=206811106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,102,1362:0,114,255:40,0 chr1 206820733 . A . PASS END=206821918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:82:34:0,82,1294:0,82,255:40,1 chr1 206821919 . A . PASS END=206821920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,83,255:26,0 chr1 206821921 . G . PASS END=206821926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 206821927 . G . PASS END=206821928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 206821929 . T . PASS END=206821932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 206821933 . C . PASS END=206821965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,892:0,61,255:26,0 chr1 206821966 . C . PASS END=206821966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 206821967 . G . PASS END=206821970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr1 206821971 . T . PASS END=206821971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:22,0 chr1 206821972 . C . PASS END=206821986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 206821987 . G . PASS END=206821988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,62,255:19,0 chr1 206821989 . C . PASS END=206822006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 206822007 . A . PASS END=206822007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 206822008 . G . PASS END=206822020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr1 206822021 . A . PASS END=206822021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:20,0 chr1 206822022 . C . PASS END=206822025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr1 206822026 . T . PASS END=206822026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,766:0,53,255:21,0 chr1 206822027 . T . PASS END=206822034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 206822035 . T . PASS END=206822036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:22:0,30,668:0,30,255:22,0 chr1 206822037 . C . PASS END=206822038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 206822039 . T . PASS END=206822039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 206822040 . G . PASS END=206822040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 206822041 . A . PASS END=206822041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 206822042 . A . PASS END=206822042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 206822043 . A . PASS END=206822043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 206822044 . A . PASS END=206822049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 206822050 . C . PASS END=206822054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr1 206822055 . C . PASS END=206822065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 206822066 . C . PASS END=206822066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 206822067 . T . PASS END=206822069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 206822070 . C . PASS END=206822071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:48:29:0,48,1016:0,48,255:28,0 chr1 206822072 . G . PASS END=206822077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 206822078 . C . PASS END=206822078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr1 206822079 . C . PASS END=206822283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:30:0,84,1260:0,90,255:40,0 chr1 206822284 . A . PASS END=206822284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:30,0 chr1 206822285 . G . PASS END=206822287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:28,0 chr1 206822288 . T . PASS END=206822295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:31:0,75,1125:0,93,255:25,0 chr1 206822296 . A . PASS END=206822296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,905:0,48,255:24,0 chr1 206822297 . A . PASS END=206822309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 206822310 . G . PASS END=206822310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 206858575 . A . LowDepth;LowGQ END=206858642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,0:3,0 chr1 206858643 . C . PASS END=206858646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,133:4,0 chr1 206858647 . A . LowGQ END=206858647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:3,0 chr1 206858648 . C . PASS END=206858651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr1 206858652 . T . LowGQ END=206858652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,72:2,0,74:4,0 chr1 206858653 . G . PASS END=206858655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr1 206858656 . C . PASS END=206858656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 206858657 . T . LowGQ END=206858657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,200:9,0,209:6,0 chr1 206858658 . G . PASS END=206858661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 206858662 . C . PASS END=206858662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 206858663 . A . PASS END=206858673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 206858674 . C . PASS END=206858674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr1 206858675 . A . PASS END=206858683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 206858684 . C . PASS END=206858684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 206858685 . G . PASS END=206858686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 206858687 . C . PASS END=206858692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr1 206858693 . C . PASS END=206858693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 206858694 . G . PASS END=206858696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 206858697 . G . PASS END=206858697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:10,0 chr1 206858698 . C . PASS END=206858698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 206858699 . A . PASS END=206858699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 206858700 . G . PASS END=206858701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 206858702 . T . PASS END=206858702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 206858703 . C . LowGQ END=206858705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,286:0,0,255:10,0 chr1 206858706 . G . PASS END=206858706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 206858707 . C . PASS END=206858707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 206858708 . A . PASS END=206858708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 206858709 . G . LowGQ END=206858709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 206858710 . T . PASS END=206858710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 206858711 . T . LowGQ END=206858711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 206858712 . C . PASS END=206858712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 206858713 . C . PASS END=206858713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 206858714 . A . PASS END=206858716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 206858717 . T . PASS END=206858717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 206858718 . C . PASS END=206858718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:11,0 chr1 206858719 . A . PASS END=206858722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr1 206858723 . C . LowGQ END=206858723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 206858724 . C . PASS END=206858726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr1 206858727 . C . PASS END=206858727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,327:0,6,255:11,0 chr1 206858728 . C . PASS END=206858728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 206858729 . T . PASS END=206858729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr1 206858730 . G . PASS END=206858732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr1 206858733 . G . PASS END=206858733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:9,0 chr1 206858734 . A . PASS END=206858734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr1 206858735 . T . PASS END=206858737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 206858738 . A . LowGQ END=206858738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 206858739 . G . PASS END=206858739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 206858740 . A . PASS END=206858745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 206858746 . G . PASS END=206858746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 206858747 . C . PASS END=206858748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 206858749 . A . PASS END=206858749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 206858750 . T . LowGQ END=206858750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:11,0 chr1 206858751 . C . PASS END=206858751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 206858752 . A . PASS END=206858752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 206858753 . T . PASS END=206858754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 206858755 . G . PASS END=206858755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 206858756 . A . PASS END=206858756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 206858757 . T . PASS END=206858757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 206858758 . G . PASS END=206858758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 206858759 . A . PASS END=206858759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr1 206858760 . C . PASS END=206858760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 206858761 . T . PASS END=206858763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 206858764 . A . PASS END=206858764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 206858765 . A . PASS END=206858767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 206858768 . T . PASS END=206858768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,527:0,17,255:15,0 chr1 206858769 . C . PASS END=206858769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 206858770 . A . PASS END=206858770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,490:0,17,255:15,0 chr1 206858771 . C . PASS END=206858778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr1 206858779 . G . PASS END=206858795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 206858796 . C . PASS END=206858806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,684:0,46,255:19,0 chr1 206858807 . T . PASS END=206858807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:18,0 chr1 206858808 . T . PASS END=206858808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 206858809 . T . PASS END=206858811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 206858812 . C . PASS END=206858812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:18,0 chr1 206858813 . A . PASS END=206858826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 206858827 . A . PASS END=206858827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 206858828 . G . PASS END=206858830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 206858831 . C . PASS END=206858831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 206858832 . C . LowGQ END=206858832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,459:27,0,255:14,0 chr1 206858833 . C . PASS END=206858833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 206858834 . A . PASS END=206858834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,482:0,18,255:14,0 chr1 206858835 . G . PASS END=206858836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 206858837 . A . PASS END=206858837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 206858838 . G . PASS END=206858838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 206858839 . A . PASS END=206858839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,433:0,15,255:14,0 chr1 206858840 . A . PASS END=206858840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 206858841 . A . PASS END=206858846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr1 206858847 . C . PASS END=206858847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 206858848 . C . PASS END=206858850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 206858851 . A . PASS END=206858851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 206858852 . A . PASS END=206858853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 206902055 . A . PASS END=206902057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 206902058 . C . PASS END=206902096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:26,0 chr1 206902097 . C . PASS END=206902126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1063:0,84,255:32,0 chr1 206902127 . G . PASS END=206902127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:32,0 chr1 206902128 . T . PASS END=206902132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1278:0,89,255:33,0 chr1 206902133 . A . PASS END=206902133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:31,0 chr1 206902134 . T . PASS END=206902139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 206902140 . A . PASS END=206902140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:30,0 chr1 206902141 . T . PASS END=206902159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:31,0 chr1 206902160 . G . PASS END=206902160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr1 206902161 . C . PASS END=206902163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 206902164 . G . PASS END=206902164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 206902165 . G . PASS END=206902177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1111:0,90,255:30,0 chr1 206902178 . C . PASS END=206902178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 206902179 . T . PASS END=206902179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 206902180 . G . PASS END=206902180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:28,0 chr1 206902181 . A . PASS END=206902182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 206902183 . T . PASS END=206902183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 206902184 . G . PASS END=206902185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 206902186 . C . PASS END=206902186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 206902187 . A . PASS END=206902194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,985:0,84,255:28,0 chr1 206902380 . T . PASS END=206902444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,100,1628:0,100,255:40,0 chr1 206902741 . A . PASS END=206902820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:39:0,96,1382:0,96,255:40,0 chr1 206903317 . C . PASS END=206903323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 206903324 . A . PASS END=206903324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 206903325 . T . PASS END=206903443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1040:0,87,255:40,0 chr1 206904033 . C . PASS END=206904061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:89:43:0,89,1491:0,89,255:40,0 chr1 206904062 . G . PASS END=206904089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:94:48:0,94,1477:0,94,255:40,0 chr1 206904090 . G . PASS END=206904090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:61:50:0,61,1560:0,61,255:40,0 chr1 206904091 . T . PASS END=206904092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,116,1614:0,116,255:40,0 chr1 206904093 . T . LowGQ END=206904094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,7:49:0:49:0,0,1230:14,0,255:40,0 chr1 206904095 . A . PASS END=206904099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:80:49:0,80,1484:0,80,255:40,0 chr1 206904100 . G . PASS END=206904100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1540:0,75,255:40,0 chr1 206904101 . T . PASS END=206904104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:91:49:0,91,1540:0,91,255:40,0 chr1 206904105 . T . PASS END=206904105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:66:49:0,66,1402:0,66,255:38,0 chr1 206904106 . C . PASS END=206904106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr1 206904107 . C . PASS END=206904107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:24:48:0,24,1295:0,24,255:35,0 chr1 206904108 . T . PASS END=206904108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1524:0,118,255:39,0 chr1 206904483 . G . PASS END=206904483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 206904484 . C . PASS END=206904501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1117:0,90,255:38,0 chr1 206904502 . T . PASS END=206904599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:34:0,84,1260:0,102,255:40,0 chr1 206904600 . A . PASS END=206904600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:27,0 chr1 206904601 . G . PASS END=206904607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 206904985 . T . PASS END=206904985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 206904986 . G . PASS END=206905002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 206905003 . A . PASS END=206905003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 206905004 . T . PASS END=206905007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:24:0,65,886:0,65,255:26,0 chr1 206905008 . C . PASS END=206905012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 206905013 . A . PASS END=206905016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 206905017 . G . PASS END=206905044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:30,0 chr1 206905045 . A . PASS END=206905045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 206905046 . G . PASS END=206905046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 206905047 . T . PASS END=206905047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1024:0,79,255:29,0 chr1 206905048 . T . PASS END=206905066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:32,0 chr1 206905067 . C . PASS END=206905068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:30:0,63,1092:0,63,255:28,0 chr1 206905069 . T . PASS END=206905070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 206905184 . C . PASS END=206905223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1164:0,85,255:39,0 chr1 206905224 . G . PASS END=206905224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr1 206905225 . G . PASS END=206905254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,99,1303:0,101,255:39,0 chr1 206905255 . G . PASS END=206905255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:32,0 chr1 206905256 . G . PASS END=206905264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1347:0,95,255:33,0 chr1 206905383 . G . PASS END=206905436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,102,1622:0,102,255:40,0 chr1 206905920 . G . PASS END=206905922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 206905923 . G . PASS END=206905938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:24,0 chr1 206905939 . T . PASS END=206905939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 206905940 . G . PASS END=206905941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 206905942 . C . PASS END=206906016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,913:0,81,255:34,0 chr1 206906017 . G . PASS END=206906017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr1 206906018 . G . PASS END=206906025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,95,255:30,0 chr1 206906026 . A . PASS END=206906026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 206906027 . A . PASS END=206906027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1047:0,38,255:25,0 chr1 206906028 . G . PASS END=206906030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 206906031 . C . PASS END=206906041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,74,255:23,0 chr1 206906042 . G . PASS END=206906043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:28:0,57,855:0,84,255:19,0 chr1 206906044 . C . PASS END=206906045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:20,0 chr1 206906046 . G . PASS END=206906046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 206906047 . C . PASS END=206906050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 206906051 . T . PASS END=206906063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:19:0,44,675:0,44,255:19,0 chr1 206941981 . T . PASS END=206942073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:41:0,96,1440:0,96,255:40,0 chr1 206943174 . C . PASS END=206943239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,135,255:40,0 chr1 206944252 . A . PASS END=206944404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:94:43:0,94,1620:0,94,255:40,0 chr1 206944701 . C . PASS END=206944760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1338:0,93,255:40,0 chr1 206945616 . A . PASS END=206945724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:28:0,80,989:0,80,255:40,0 chr1 206945725 . C . PASS END=206945725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:28,0 chr1 206945726 . T . PASS END=206945730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 206945731 . C . PASS END=206945751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,68,255:26,0 chr1 206945752 . A . PASS END=206945752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 206945753 . G . PASS END=206945753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 206945754 . G . PASS END=206945754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 206945755 . C . PASS END=206945756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 206945757 . A . PASS END=206945771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:20:0,42,630:0,56,255:19,0 chr1 206945772 . G . PASS END=206945780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,540:0,34,255:13,0 chr1 206946407 . T . PASS END=206946407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,108,1620:0,135,255:36,0 chr1 206946634 . A . PASS END=206946634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:56:0,120,1800:0,121,255:40,0 chr1 206946897 . T . PASS END=206946897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:64:0,120,1800:0,137,255:40,0 chr1 206972240 . A . PASS END=206972244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 206972245 . C . PASS END=206972245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 206972246 . A . PASS END=206972246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr1 206972247 . C . PASS END=206972254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 206972255 . G . PASS END=206972255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,872:0,42,255:26,0 chr1 206972256 . C . PASS END=206972302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,950:0,81,255:34,0 chr1 206972303 . A . PASS END=206972303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1140:0,63,255:31,0 chr1 206972304 . C . PASS END=206972323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1139:0,80,255:32,0 chr1 206972324 . C . PASS END=206972347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 206972348 . C . PASS END=206972351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,62,255:19,0 chr1 207010006 . G . PASS END=207010011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:74:25:0,74,909:0,74,255:29,0 chr1 207010012 . A . PASS END=207010151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1139:0,80,255:40,0 chr1 207010303 . C . PASS END=207010368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:61:0,120,1800:0,160,255:40,0 chr1 207013195 . C . PASS END=207013195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 207013196 . C . PASS END=207013197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 207013198 . T . PASS END=207013200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 207013201 . G . PASS END=207013204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 207013205 . T . PASS END=207013205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 207013206 . G . PASS END=207013209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,945:0,75,255:25,0 chr1 207013210 . T . PASS END=207013210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 207013211 . G . PASS END=207013223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,866:0,75,255:26,0 chr1 207013224 . C . PASS END=207013243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 207013244 . A . PASS END=207013244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 207013245 . C . PASS END=207013245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 207013246 . A . PASS END=207013246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 207013247 . G . PASS END=207013255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 207013256 . A . PASS END=207013256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 207013257 . G . PASS END=207013257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 207013258 . G . PASS END=207013259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr1 207013260 . T . PASS END=207013284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:30:0,85,1061:0,85,255:33,0 chr1 207013285 . T . PASS END=207013285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 207013286 . T . PASS END=207013294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 207013295 . T . PASS END=207013295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 207013296 . C . PASS END=207013299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 207013300 . A . PASS END=207013300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:26,0 chr1 207013301 . G . PASS END=207013301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207013302 . C . PASS END=207013305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 207013306 . G . PASS END=207013306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:22,0 chr1 207013307 . C . PASS END=207013309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 207013310 . A . PASS END=207013310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,787:0,37,255:20,0 chr1 207013311 . C . PASS END=207013317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:23,0 chr1 207013318 . C . PASS END=207013318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:20,0 chr1 207013319 . T . PASS END=207013319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 207013320 . C . PASS END=207013320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 207013321 . T . PASS END=207013322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 207013323 . C . PASS END=207013323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 207013324 . A . PASS END=207013325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 207013326 . G . PASS END=207013326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 207013327 . C . PASS END=207013343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,848:0,61,255:26,0 chr1 207013344 . A . PASS END=207013345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:28:0,57,855:0,67,255:19,0 chr1 207013346 . G . PASS END=207013355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:21,0 chr1 207013356 . C . PASS END=207013369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,670:0,57,255:19,0 chr1 207013370 . C . PASS END=207013370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 207013371 . A . PASS END=207013382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 207013383 . C . PASS END=207013385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207013386 . T . PASS END=207013386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 207013387 . C . PASS END=207013392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,735:0,60,255:20,0 chr1 207013393 . A . PASS END=207013411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 207013412 . C . PASS END=207013412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207013413 . T . PASS END=207013414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 207013415 . G . PASS END=207013415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 207013416 . C . PASS END=207013450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,862:0,66,255:24,0 chr1 207013451 . A . PASS END=207013451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:22,0 chr1 207013452 . A . PASS END=207013455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 207013456 . A . PASS END=207013456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 207013457 . A . PASS END=207013476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 207013477 . G . PASS END=207013485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,52,255:17,0 chr1 207013486 . G . PASS END=207013511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr1 207013512 . G . PASS END=207013512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 207013513 . C . PASS END=207013568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 207013569 . C . PASS END=207013608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,515:0,45,255:18,0 chr1 207014349 . C . PASS END=207014423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:91:40:0,91,1504:0,91,255:40,0 chr1 207015872 . C . PASS END=207015919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:43:0,113,1567:0,113,255:40,0 chr1 207015920 . T . PASS END=207015956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:53:0,120,1800:0,135,255:40,0 chr1 207015957 . T C, 49.97 PASS DP=53;MQ=249.94;MQRankSum=5.756;ReadPosRankSum=4.919;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,26,0:0.491,0.000:53:11,13,0:16,13,0:48:85,0,50,864,896,1760:255,0,255:26,0:4.9970e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,12,14:17,10,13,13 chr1 207015958 . C . PASS END=207015967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,143,255:40,0 chr1 207038807 . A . PASS END=207038810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:13,0 chr1 207038811 . G . PASS END=207038811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 207038812 . T . PASS END=207038816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 207038817 . T . PASS END=207038817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 207038818 . C . PASS END=207038822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 207038823 . A . PASS END=207038829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr1 207038830 . T . PASS END=207038830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 207038831 . T . PASS END=207038866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 207038867 . T . PASS END=207038867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:14,0 chr1 207038868 . C . PASS END=207038872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr1 207038873 . C . PASS END=207038873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 207038874 . A . PASS END=207038876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 207038877 . T . PASS END=207038877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207038878 . G . PASS END=207038879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,751:0,47,255:19,0 chr1 207038880 . C . PASS END=207038890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:23,0 chr1 207038891 . G . PASS END=207038891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 207038892 . G . PASS END=207038896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 207038897 . A . PASS END=207038902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr1 207038903 . T . PASS END=207038903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 207038904 . G . PASS END=207038905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207038906 . G . PASS END=207038906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 207038907 . C . PASS END=207038909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207038910 . T . PASS END=207038915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr1 207038916 . C . PASS END=207038916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207038917 . G . PASS END=207038919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 207038920 . G . PASS END=207038922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 207038923 . A . PASS END=207038923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr1 207038924 . G . PASS END=207038945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 207038946 . C . PASS END=207038946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 207038947 . C . PASS END=207038948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 207038949 . C . PASS END=207038949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:26,0 chr1 207038950 . G . PASS END=207038951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207038952 . C . PASS END=207038952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 207038953 . C . PASS END=207038967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,86,255:29,0 chr1 207038968 . G . PASS END=207038969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 207038970 . A . PASS END=207038970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr1 207038971 . C . PASS END=207038973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207038974 . A . PASS END=207038974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr1 207038975 . G . PASS END=207038988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,886:0,67,255:25,0 chr1 207038989 . A . PASS END=207038989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,790:0,42,255:23,0 chr1 207038990 . C . PASS END=207038991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 207038992 . T . PASS END=207038992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:23,0 chr1 207038993 . G . PASS END=207038994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 207038995 . A . PASS END=207038995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:23,0 chr1 207038996 . A . PASS END=207038999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 207039000 . T . PASS END=207039000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 207039001 . C . PASS END=207039017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,803:0,69,255:24,0 chr1 207039018 . G . PASS END=207039018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 207039019 . G . PASS END=207039022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207039023 . T . PASS END=207039023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr1 207039024 . T . PASS END=207039024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207039025 . T . PASS END=207039025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr1 207039026 . T . PASS END=207039029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 207039030 . T . PASS END=207039031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:20,0 chr1 207039168 . C . PASS END=207039356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:40:0,84,1260:0,95,255:40,0 chr1 207039644 . C . PASS END=207039709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,129,255:40,0 chr1 207039829 . C . PASS END=207039853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1244:0,91,255:34,0 chr1 207039854 . G . PASS END=207039854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:31,0 chr1 207039855 . C . PASS END=207039857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 207039858 . T . PASS END=207039858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1144:0,63,255:33,0 chr1 207039859 . T . PASS END=207039971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1133:0,82,255:40,0 chr1 207039972 . C . PASS END=207039981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:27:0,60,900:0,81,255:26,0 chr1 207040729 . C . PASS END=207040803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,142,255:40,0 chr1 207041832 . C . PASS END=207041909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:68:0,120,1800:0,175,255:40,0 chr1 207071178 . A . PASS END=207071221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:60:0,120,1800:0,164,255:40,1 chr1 207072662 . C . PASS END=207072667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 207072668 . C . PASS END=207072678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 207072679 . C . PASS END=207072679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 207072680 . T . PASS END=207072697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr1 207072698 . T . PASS END=207072698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 207072699 . C . PASS END=207072700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 207072701 . A . PASS END=207072701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 207072702 . A . PASS END=207072710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 207072711 . G . PASS END=207072728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:25,0 chr1 207072729 . G . PASS END=207072736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,881:0,81,255:27,0 chr1 207072737 . C . PASS END=207072738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 207072739 . T . PASS END=207072745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,895:0,81,255:27,0 chr1 207072746 . C . PASS END=207072783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,978:0,78,255:26,0 chr1 207072784 . A . PASS END=207072788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 207072789 . G . PASS END=207072789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 207072790 . G . PASS END=207072791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 207072792 . C . PASS END=207072809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 207072810 . G . PASS END=207072817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,59,255:19,0 chr1 207072818 . C . PASS END=207072832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 207072833 . A . PASS END=207072850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 207072851 . A . PASS END=207072860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:13,0 chr1 207073640 . C . PASS END=207073702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1172:0,93,255:38,0 chr1 207074839 . G . PASS END=207074867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,120,1476:0,120,255:40,0 chr1 207074868 . C . PASS END=207074904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,173,255:40,0 chr1 207074905 . T C, 227.58 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,24,0:0,36,0:178:265,181,0,2327,181,2327:255,180,0:0,0:2.2758e+02,1.7758e+02,0.0000e+00,4.5000e+02,2.1235e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,28:0,0,40,20 chr1 207074906 . A . PASS END=207074942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,161,255:40,0 chr1 207074943 . A . PASS END=207074997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:37:0,84,1260:0,111,255:40,0 chr1 207075343 . C . PASS END=207075417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:40:0,92,1390:0,92,255:40,0 chr1 207076321 . T . PASS END=207076404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,102,1452:0,102,255:40,0 chr1 207078364 . T . PASS END=207078372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:25,0 chr1 207078373 . A . PASS END=207078492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,975:0,81,255:40,0 chr1 207082807 . C . PASS END=207082813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 207082814 . G . PASS END=207082814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 207082815 . G . PASS END=207082815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 207082816 . G . PASS END=207082833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 207082834 . T . PASS END=207082834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 207082835 . C . PASS END=207082853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 207082854 . C . PASS END=207082856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 207082857 . C . PASS END=207082865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 207083070 . C . PASS END=207083074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 207083075 . G . PASS END=207083075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 207083076 . C . PASS END=207083091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr1 207083092 . G . PASS END=207083092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,721:0,32,255:20,0 chr1 207083093 . C . PASS END=207083094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 207083095 . C . PASS END=207083103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:19,0 chr1 207083104 . G . PASS END=207083104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207083105 . G . PASS END=207083159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,43,255:19,0 chr1 207083160 . A . PASS END=207083162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 207083163 . T . PASS END=207083166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,605:0,40,255:15,0 chr1 207083167 . C . PASS END=207083167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:14,0 chr1 207083168 . A . PASS END=207083174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 207083175 . G . PASS END=207083175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 207083176 . C . PASS END=207083176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 207083177 . A . PASS END=207083188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr1 207083189 . A . PASS END=207083189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 207083190 . G . PASS END=207083200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 207083201 . C . PASS END=207083201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 207083202 . G . PASS END=207083202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 207083203 . C . PASS END=207083213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 207083555 . C . PASS END=207083652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1197:0,86,255:40,0 chr1 207083653 . T . PASS END=207083670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:26,0 chr1 207083671 . C . PASS END=207083671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr1 207083672 . C . PASS END=207083673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 207083674 . T . PASS END=207083685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,50,255:18,0 chr1 207085075 . C . PASS END=207085091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:24,0 chr1 207085092 . G . PASS END=207085095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,924:0,81,255:27,0 chr1 207085096 . T . PASS END=207085107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 207085108 . C . PASS END=207085111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207085112 . G . PASS END=207085112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 207085113 . C . PASS END=207085118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1101:0,84,255:30,0 chr1 207085119 . G . PASS END=207085119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 207085120 . G . PASS END=207085126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:32,0 chr1 207085127 . G . PASS END=207085127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr1 207085128 . C . PASS END=207085225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1164:0,85,255:40,0 chr1 207085226 . G . PASS END=207085242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:26,0 chr1 207085243 . G . PASS END=207085247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207085248 . G . PASS END=207085275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 207085276 . C . PASS END=207085276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 207085277 . C . PASS END=207085295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 207085296 . A . PASS END=207085297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 207086274 . C . PASS END=207086387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:37:0,85,1496:0,85,255:40,0 chr1 207087104 . C . PASS END=207087104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 207087105 . A . PASS END=207087134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:24,0 chr1 207087135 . C . PASS END=207087135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 207087136 . T . PASS END=207087137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 207087138 . T . PASS END=207087138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 207087139 . C . PASS END=207087140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,823:0,69,255:24,0 chr1 207087141 . C . PASS END=207087141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 207087142 . C . PASS END=207087149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:25,0 chr1 207087150 . G . PASS END=207087150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 207087151 . T . PASS END=207087151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 207087152 . T . PASS END=207087232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1109:0,88,255:38,0 chr1 207087233 . G . PASS END=207087233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 207087234 . G . PASS END=207087289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,95,255:36,0 chr1 207087290 . A . PASS END=207087299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:32:0,72,1080:0,96,255:26,0 chr1 207087300 . A . PASS END=207087313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1124:0,87,255:29,0 chr1 207087314 . A . PASS END=207087314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:26,0 chr1 207087315 . T . PASS END=207087366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1156:0,83,255:33,0 chr1 207087367 . C . PASS END=207087367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 207087368 . A . PASS END=207087382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1202:0,83,255:32,0 chr1 207087383 . A . PASS END=207087389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 207087390 . C . PASS END=207087390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 207087391 . A . PASS END=207087391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:27,0 chr1 207087392 . G . PASS END=207087392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 207087393 . C . PASS END=207087397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:49:29:0,49,1031:0,49,255:27,0 chr1 207087398 . C . PASS END=207087401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr1 207087402 . T . PASS END=207087403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 207087404 . C . PASS END=207087412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,674:0,42,255:27,0 chr1 207087413 . C . PASS END=207087434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr1 207087435 . C T, 122.24 PASS DP=25;MQ=249.46;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,10,0:0,15,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,18:0,0,16,9 chr1 207087436 . G . PASS END=207087437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 207087438 . T . PASS END=207087439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 207095163 . C . PASS END=207095199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1358:0,87,255:39,0 chr1 207103663 . C . PASS END=207103679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 207103680 . C . PASS END=207103741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1002:0,81,255:39,0 chr1 207103742 . G . PASS END=207103742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1363:0,62,255:35,0 chr1 207103743 . C . PASS END=207103758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,101,1418:0,101,255:37,0 chr1 207104842 . C . PASS END=207104900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:56:0,104,1656:0,104,255:40,0 chr1 207105016 . C . PASS END=207105147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:35:0,87,1305:0,89,255:40,0 chr1 207105801 . C . PASS END=207105810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,579:0,57,255:19,0 chr1 207105811 . C . PASS END=207105822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 207105823 . T . PASS END=207105823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 207105824 . C . PASS END=207105832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 207105833 . C . PASS END=207105833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 207105834 . C . PASS END=207105834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207105835 . C G, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=3.838;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:7,7,0:4,3,0:48:85,0,50,358,393,751:255,0,255:10,0:4.9897e+01,6.6269e-05,5.3000e+01,3.5769e+02,4.2774e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,5,5:7,4,6,4 chr1 207105836 . A . PASS END=207105862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:22,0 chr1 207105863 . A . PASS END=207105863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 207105864 . G . PASS END=207105872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 207105873 . G . PASS END=207105881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 207105882 . T . PASS END=207105888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr1 207105889 . C . PASS END=207105893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr1 207105894 . C . PASS END=207105901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:14,0 chr1 207105902 . C . PASS END=207105910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 207105911 . T . PASS END=207105922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:17,0 chr1 207106331 . C . PASS END=207106341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:19,0 chr1 207106342 . C . PASS END=207106347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr1 207106348 . T . PASS END=207106348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 207106349 . G . PASS END=207106350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 207106351 . T . PASS END=207106351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 207106352 . C . PASS END=207106353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 207106354 . G . PASS END=207106354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 207106355 . C . PASS END=207106358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 207106359 . C . PASS END=207106359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 207106360 . A . PASS END=207106375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,895:0,62,255:26,0 chr1 207106376 . G . PASS END=207106376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 207106377 . T . PASS END=207106377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 207106378 . A . PASS END=207106378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 207106379 . T . PASS END=207106381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 207106382 . G . PASS END=207106384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207106385 . A . PASS END=207106388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207106389 . C . PASS END=207106391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 207106392 . T . PASS END=207106425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 207106426 . T . PASS END=207106428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 207106429 . G . PASS END=207106450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 207106451 . G . PASS END=207106456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,790:0,50,255:19,0 chr1 207106457 . A . PASS END=207106457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 207106458 . G . PASS END=207106458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 207106459 . C . PASS END=207106461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 207106462 . C . PASS END=207106473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 207106474 . A . PASS END=207106474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 207106475 . G . PASS END=207106484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 207106485 . C . PASS END=207106488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 207106489 . C . PASS END=207106492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 207106493 . A . PASS END=207106495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr1 207106496 . C . PASS END=207106496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 207106497 . T . PASS END=207106499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 207106500 . C . PASS END=207106508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 207106509 . A . PASS END=207106509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 207106510 . C . PASS END=207106511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:16,0 chr1 207107765 . C . PASS END=207107803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1163:0,80,255:39,0 chr1 207107804 . C . PASS END=207107804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1266:0,62,255:37,0 chr1 207107805 . A . PASS END=207108035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:36:0,87,1243:0,87,255:40,0 chr1 207108036 . G . PASS END=207108036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:39,0 chr1 207108037 . A . PASS END=207108042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,108,1620:0,112,255:40,0 chr1 207108043 . T . PASS END=207108043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1380:0,79,255:32,0 chr1 207108044 . C . PASS END=207108054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1350:0,114,255:37,0 chr1 207108055 . G . PASS END=207108055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:28,0 chr1 207108056 . C . PASS END=207108063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:29,0 chr1 207108064 . T . PASS END=207108091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 207108831 . C . PASS END=207108838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:18,0 chr1 207108839 . A . PASS END=207108842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 207108843 . T . PASS END=207108843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 207108844 . G . PASS END=207108846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 207108847 . C . PASS END=207108848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 207108849 . C . PASS END=207108854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 207108855 . T . PASS END=207108855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 207108856 . G . PASS END=207108874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,939:0,69,255:26,0 chr1 207108875 . C . PASS END=207108878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 207108879 . T . PASS END=207108909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,862:0,72,255:26,0 chr1 207108910 . G . PASS END=207108910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 207108911 . C . PASS END=207108923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr1 207108924 . T . PASS END=207108924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 207108925 . G . PASS END=207108929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 207108930 . T . PASS END=207108974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:17,0 chr1 207108975 . G . PASS END=207108975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 207108976 . G . PASS END=207108978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 207108979 . C . PASS END=207108981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 207108982 . G . PASS END=207108986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 207108987 . G . PASS END=207109013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 207109014 . C . PASS END=207109014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 207109015 . C . PASS END=207109035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr1 207109036 . C . PASS END=207109036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr1 207109037 . T . PASS END=207109037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 207109038 . G . PASS END=207109038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 207109039 . G . PASS END=207109049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,344:0,30,255:11,0 chr1 207109050 . A . PASS END=207109050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 207109051 . G . PASS END=207109061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:13,0 chr1 207109062 . A . PASS END=207109070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,436:0,42,255:14,0 chr1 207109071 . T . PASS END=207109071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 207109072 . T . PASS END=207109076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 207109077 . T . PASS END=207109078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 207109079 . T . PASS END=207109079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 207109080 . C . PASS END=207109087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 207109088 . T . PASS END=207109088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 207109089 . T . PASS END=207109096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr1 207109097 . C . PASS END=207109097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 207109098 . A . PASS END=207109115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr1 207109116 . C T, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,9,0:0,6,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,10:0,0,9,6 chr1 207109117 . T . PASS END=207109121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 207109122 . C . PASS END=207109134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 207109135 . C . PASS END=207109135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr1 207109136 . A . PASS END=207109163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 207110440 . C . PASS END=207110446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,631:0,41,255:19,0 chr1 207110447 . G . PASS END=207110480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,740:0,60,255:26,0 chr1 207110481 . T . PASS END=207110481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,815:0,45,255:24,0 chr1 207110482 . C . PASS END=207110504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,854:0,61,255:26,0 chr1 207110505 . G . PASS END=207110505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207110506 . C . PASS END=207110507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207110508 . C . PASS END=207110521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr1 207110522 . C . PASS END=207110522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 207110523 . C . PASS END=207110526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 207110527 . C . PASS END=207110527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 207110528 . A . PASS END=207110528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,901:0,57,255:26,0 chr1 207110529 . T . PASS END=207110548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,980:0,84,255:28,0 chr1 207110549 . G . PASS END=207110550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207110551 . T . PASS END=207110556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 207110557 . C . PASS END=207110580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,68,255:26,0 chr1 207110581 . G . PASS END=207110581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 207110582 . G . PASS END=207110628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,779:0,61,255:26,0 chr1 207110629 . G . PASS END=207110629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 207110630 . G . PASS END=207110631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 207110632 . T . PASS END=207110632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:23,0 chr1 207110633 . G . PASS END=207110656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1030:0,68,255:26,0 chr1 207110657 . C . PASS END=207110657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207110658 . C . PASS END=207110658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 207110659 . C . PASS END=207110660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 207110661 . C . PASS END=207110681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 207110682 . T . PASS END=207110683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 207110684 . G . PASS END=207110708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,765:0,61,255:24,0 chr1 207110709 . A . PASS END=207110709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 207110710 . G . PASS END=207110711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 207110712 . G . PASS END=207110712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 207110713 . C . PASS END=207110724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 207110725 . T . PASS END=207110725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 207110726 . C . PASS END=207110726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 207110727 . A . PASS END=207110727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 207110728 . C . PASS END=207110854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,862:0,61,255:26,0 chr1 207110855 . G . PASS END=207110858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207110859 . T . PASS END=207110859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207110860 . G . PASS END=207110870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 207110871 . A . PASS END=207110880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 207110881 . G . PASS END=207110898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1241:0,89,255:35,0 chr1 207110899 . G . PASS END=207110901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 207110902 . T . PASS END=207110902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:33,0 chr1 207110903 . A . PASS END=207110935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1382:0,87,255:40,0 chr1 207110936 . T C, 173.41 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,21,0:0,21,0:123:211,126,0,1622,126,1622:255,126,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,23:0,0,16,26 chr1 207110937 . A . PASS END=207110973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1388:0,98,255:40,0 chr1 207110974 . G . PASS END=207111058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1192:0,86,255:40,0 chr1 207111059 . C . PASS END=207111096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 207112464 . C . PASS END=207112512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,737:0,60,255:26,0 chr1 207112513 . G . PASS END=207112515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 207112516 . C . PASS END=207112516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207112517 . A . PASS END=207112565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1157:0,82,255:33,0 chr1 207112566 . T . PASS END=207112566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:30,0 chr1 207112567 . C . PASS END=207112567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:30,0 chr1 207112568 . A . PASS END=207112568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr1 207112569 . C . PASS END=207112569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr1 207112570 . C . PASS END=207112573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:30,0 chr1 207112574 . A . PASS END=207112574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:29,0 chr1 207112575 . A . PASS END=207112579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:30,0 chr1 207112580 . C . PASS END=207112580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 207112581 . C . PASS END=207112585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:31,0 chr1 207112586 . T . PASS END=207112586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 207112587 . C . PASS END=207112606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1170:0,86,255:33,0 chr1 207112607 . G . PASS END=207112607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:30,0 chr1 207112608 . C . PASS END=207112676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,88,255:36,0 chr1 207112677 . C . PASS END=207112678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 207112679 . T . PASS END=207112686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 207112687 . C . PASS END=207112687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 207112688 . C . PASS END=207112688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207112689 . A . PASS END=207112689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 207112690 . G . PASS END=207112769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1142:0,85,255:35,0 chr1 207112770 . C . PASS END=207112779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207112780 . A . PASS END=207112783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 207112784 . A . PASS END=207112807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 207112808 . G . PASS END=207112808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 207113834 . C . PASS END=207113876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1227:0,99,255:34,0 chr1 207131861 . T . PASS END=207131867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:23,0 chr1 207131868 . C . PASS END=207131868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 207131869 . C . PASS END=207131870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 207131871 . G . PASS END=207131871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 207131872 . G . PASS END=207131879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:25,0 chr1 207131880 . T . PASS END=207131880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 207131881 . C . PASS END=207131896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,915:0,75,255:26,0 chr1 207131897 . G . PASS END=207132010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1033:0,84,255:36,0 chr1 207132011 . T . PASS END=207132021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 207133024 . A . PASS END=207133142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,107,1414:0,107,255:40,0 chr1 207133767 . C . PASS END=207133767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 207133768 . G . PASS END=207133771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 207133772 . C . PASS END=207133772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 207133773 . A . PASS END=207133784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr1 207133785 . T . PASS END=207133788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 207133789 . C . PASS END=207133789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 207133790 . A . PASS END=207133796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 207133797 . C . PASS END=207133809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:14,0 chr1 207133810 . C . PASS END=207133810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 207133811 . T . PASS END=207133815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 207133816 . G . PASS END=207133827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 207133828 . G . PASS END=207133830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 207133831 . T . PASS END=207133843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 207133844 . T . PASS END=207133855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr1 207133856 . G . PASS END=207133862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 207133863 . T . PASS END=207133864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 207133865 . T . PASS END=207133867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 207133868 . G . PASS END=207133876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,523:0,48,255:16,0 chr1 207133877 . A . PASS END=207133877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 207133878 . G . PASS END=207133909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 207133910 . G . PASS END=207133942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:22:0,64,764:0,64,255:25,0 chr1 207133943 . C . PASS END=207133952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1111:0,84,255:30,0 chr1 207133953 . G . PASS END=207133953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 207133954 . C . PASS END=207134108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:30:0,86,1064:0,86,255:40,2 chr1 207134109 . T . PASS END=207134109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:33:47:0,33,1462:0,33,255:39,2 chr1 207134110 . T . PASS END=207134292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1147:0,81,255:40,0 chr1 207134293 . C . PASS END=207134293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:27,0 chr1 207134294 . T . PASS END=207134294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 207134295 . G . PASS END=207134302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 207134303 . A . PASS END=207134338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:29,0 chr1 207134339 . T . PASS END=207134339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 207134340 . G . PASS END=207134362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:29,0 chr1 207134363 . T . PASS END=207134363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 207134364 . G . PASS END=207134417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1124:0,80,255:33,0 chr1 207134418 . G . PASS END=207134424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 207134425 . C . PASS END=207134470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:30:0,80,1161:0,80,255:31,0 chr1 207134471 . T . PASS END=207134471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 207134472 . G . PASS END=207134476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 207134477 . C . PASS END=207134477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 207134478 . C . PASS END=207134479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:28,0 chr1 207134480 . T . PASS END=207134481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 207134482 . T . PASS END=207134482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 207134483 . G . PASS END=207134491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:29,0 chr1 207134492 . T . PASS END=207134493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 207134494 . G . PASS END=207134494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:28,0 chr1 207134495 . A . PASS END=207134496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207134497 . A . PASS END=207134497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:27,0 chr1 207134498 . C . PASS END=207134498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207134499 . G . PASS END=207134504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:28:0,45,1000:0,45,255:27,0 chr1 207134505 . C . PASS END=207134505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:23,0 chr1 207134506 . C . PASS END=207134510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:23,0 chr1 207134511 . G . PASS END=207134511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 207134512 . A . PASS END=207134516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,787:0,33,255:22,0 chr1 207134517 . A . PASS END=207134517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 207134518 . T . PASS END=207134518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 207134519 . G . PASS END=207134519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr1 207134520 . G . PASS END=207134520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 207134521 . T . PASS END=207134521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,714:0,14,255:18,0 chr1 207134522 . G . PASS END=207134522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 207134523 . A . PASS END=207134526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:19,0 chr1 207134527 . C . PASS END=207134527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 207134528 . C . PASS END=207134529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:17,0 chr1 207134530 . C . PASS END=207134530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 207134531 . A . PASS END=207134534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,692:0,24,255:18,0 chr1 207134535 . G . PASS END=207134535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 207134536 . C . PASS END=207134537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 207134538 . G . PASS END=207134557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 207134558 . G . PASS END=207134563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 207134564 . G . PASS END=207134564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:10,0 chr1 207134565 . G . PASS END=207134568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 207135558 . C . PASS END=207135561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr1 207135562 . A . PASS END=207135562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 207135563 . G . PASS END=207135563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:26,0 chr1 207135564 . A . PASS END=207135566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 207135567 . T . PASS END=207135567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 207135568 . G . PASS END=207135583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1164:0,80,255:33,0 chr1 207135584 . A . PASS END=207135740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1045:0,86,255:40,0 chr1 207135741 . A . PASS END=207135741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr1 207135742 . C . PASS END=207135746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 207135747 . T . PASS END=207135747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1156:0,68,255:29,0 chr1 207135748 . G . PASS END=207135758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 207135759 . T . PASS END=207135771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:25,0 chr1 207135772 . C . PASS END=207135819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1028:0,82,255:36,0 chr1 207135820 . G . PASS END=207135820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,972:0,52,255:29,0 chr1 207135821 . G . PASS END=207135827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:32,0 chr1 207135828 . G . PASS END=207135831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:32,0 chr1 207135832 . C . PASS END=207135852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1127:0,80,255:31,0 chr1 207135853 . A . PASS END=207135853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 207135854 . G . PASS END=207135856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 207135857 . T . PASS END=207135877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr1 207135878 . C . PASS END=207135878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 207135879 . C . PASS END=207135879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 207135880 . C . PASS END=207135880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 207135881 . T . PASS END=207135885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:22,0 chr1 207135886 . T . PASS END=207135886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:20,0 chr1 207135887 . G . PASS END=207135887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 207135888 . A . PASS END=207135888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr1 207135889 . A . PASS END=207135896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 207139060 . C . PASS END=207139062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 207139063 . C . PASS END=207139063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 207139064 . A . PASS END=207139071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:13,0 chr1 207139072 . T . PASS END=207139072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 207139073 . C . PASS END=207139074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 207139075 . C . PASS END=207139079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 207139080 . C . PASS END=207139080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 207139081 . G . PASS END=207139086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 207139087 . A . PASS END=207139087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 207139088 . G . PASS END=207139088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 207139089 . A . PASS END=207139102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr1 207139103 . C . PASS END=207139103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 207139104 . C . PASS END=207139109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 207139110 . G . PASS END=207139110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 207139111 . T . PASS END=207139115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 207139116 . A . PASS END=207139116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 207139117 . T . PASS END=207139140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 207139141 . G . PASS END=207139141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:15,0 chr1 207139142 . G . PASS END=207139159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,643:0,51,255:17,0 chr1 207139160 . C . PASS END=207139160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 207139161 . C . PASS END=207139172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 207139173 . G . PASS END=207139197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 207139198 . A . PASS END=207139198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 207139199 . A . PASS END=207139201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 207139202 . A . PASS END=207139202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 207139203 . C . PASS END=207139203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 207140397 . C . PASS END=207140397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 207140398 . T . PASS END=207140398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr1 207140399 . T . PASS END=207140399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 207140400 . G . PASS END=207140400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 207140401 . T . PASS END=207140401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 207140402 . A . PASS END=207140412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:33,0 chr1 207140413 . T . PASS END=207140413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 207140414 . A . PASS END=207140447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:33:0,84,1194:0,86,255:34,0 chr1 207140448 . T . PASS END=207140449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 207140450 . C . PASS END=207140450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,82,255:27,0 chr1 207140451 . T . PASS END=207140451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:26,0 chr1 207140452 . G . PASS END=207140453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1161:0,80,255:27,0 chr1 207140454 . T . PASS END=207140454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:27,0 chr1 207140455 . G . PASS END=207140456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 207140457 . C . PASS END=207140457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr1 207140928 . G . PASS END=207140932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1232:0,108,255:36,0 chr1 207140933 . A . PASS END=207140933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:34,0 chr1 207140934 . T . PASS END=207140978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:89:37:0,89,1358:0,89,255:40,0 chr1 207140979 . T . PASS END=207140979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1349:0,51,255:35,0 chr1 207140980 . C . PASS END=207140996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,99,1358:0,100,255:38,0 chr1 207142572 . C . PASS END=207142574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,186,255:40,0 chr1 207142590 . T . PASS END=207142703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,135,255:40,0 chr1 207143432 . C . PASS END=207143459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,128,255:40,0 chr1 207143460 . T . PASS END=207143470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,136,255:40,0 chr1 207195303 . C . PASS END=207195303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207195304 . T . PASS END=207195307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207195308 . C . PASS END=207195310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207195311 . T . PASS END=207195316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:26,0 chr1 207195317 . G . PASS END=207195359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1050:0,90,255:31,0 chr1 207195360 . A . PASS END=207195360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 207195361 . C . PASS END=207195388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr1 207195389 . A . PASS END=207195389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:28,2 chr1 207195390 . G . PASS END=207195390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1094:0,30,255:29,2 chr1 207195391 . G . PASS END=207195391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1123:0,58,255:30,0 chr1 207195392 . G . PASS END=207195402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 207195403 . A . PASS END=207195403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:25,0 chr1 207195404 . G . PASS END=207195406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207195407 . T . PASS END=207195416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr1 207195417 . C . PASS END=207195418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 207195419 . G . PASS END=207195420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:22,0 chr1 207195421 . C . PASS END=207195427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:26:0,51,765:0,65,255:19,0 chr1 207195428 . A . PASS END=207195428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:19,0 chr1 207195429 . G . PASS END=207195430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:25:0,44,810:0,44,255:19,0 chr1 207195431 . A . PASS END=207195431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,804:0,20,255:17,0 chr1 207195432 . C . PASS END=207195432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 207195433 . A . PASS END=207195433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 207195434 . G . PASS END=207195467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:17:0,44,675:0,44,255:19,0 chr1 207195468 . C . PASS END=207195471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 207195472 . T . PASS END=207195472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 207195473 . T . PASS END=207195475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 207195476 . C . PASS END=207195477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 207195478 . A . PASS END=207195481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 207195482 . G . PASS END=207195492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 207195493 . A . PASS END=207195504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,460:0,42,255:16,0 chr1 207195505 . G A, 49.45 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=2.540;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,7,0:0.438,0.000:16:3,2,0:6,5,0:48:84,0,50,242,322,564:224,0,254:6,0:4.9454e+01,7.0928e-05,5.3000e+01,2.4232e+02,3.5660e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,2,5:4,5,3,4 chr1 207195506 . T . PASS END=207195511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 207195512 . G . PASS END=207195517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr1 207195518 . C . PASS END=207195518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 207195519 . C . PASS END=207195519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 207195520 . G . PASS END=207195542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:18,0 chr1 207195543 . G . PASS END=207195603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,576:0,40,255:18,0 chr1 207195604 . C . PASS END=207195604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 207195605 . T . PASS END=207195621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr1 207195622 . G . PASS END=207195622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 207195623 . A . PASS END=207195636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 207195637 . A . PASS END=207195637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 207195638 . G . PASS END=207195644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:14,0 chr1 207195645 . G . PASS END=207195645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 207195646 . C . PASS END=207195651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 207195652 . C . PASS END=207195660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 207195661 . G . PASS END=207195661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 207195662 . T . PASS END=207195662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 207195663 . G . PASS END=207195741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr1 207195742 . G . PASS END=207195745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,737:0,57,255:19,0 chr1 207195746 . G . PASS END=207195749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 207195750 . A . PASS END=207195750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 207195751 . C . PASS END=207195766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 207195767 . C . PASS END=207195767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr1 207195768 . C . PASS END=207195775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 207195776 . T . PASS END=207195776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 207195777 . A . PASS END=207195778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 207195779 . A G, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,13,0:0,11,0:69:157,72,0,915,72,915:255,72,0:0,0:1.1923e+02,6.9227e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,11:0,0,10,14 chr1 207195780 . A . PASS END=207195783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 207195784 . G . PASS END=207195784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 207195785 . G . PASS END=207195788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 207195789 . A . PASS END=207195789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 207195790 . G . PASS END=207195791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 207195792 . T . PASS END=207195792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 207195793 . T . PASS END=207195809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,894:0,72,255:25,0 chr1 207195810 . G . PASS END=207195810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 207195811 . C . PASS END=207195816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 207195817 . G . PASS END=207195830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr1 207195831 . T . PASS END=207195831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 207195832 . G . PASS END=207195838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 207195839 . G . PASS END=207195839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 207195840 . T . PASS END=207195845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 207195846 . A . PASS END=207195846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 207195847 . G . PASS END=207195848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 207195849 . T . PASS END=207195849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 207195850 . G . PASS END=207195852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 207195853 . C . PASS END=207195853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 207195854 . C . PASS END=207195873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,917:0,72,255:26,0 chr1 207195874 . T . PASS END=207195874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:23,0 chr1 207195875 . G . PASS END=207195875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 207195876 . A . PASS END=207195879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207195880 . A . PASS END=207195897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr1 207195898 . G . PASS END=207195902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 207195903 . A . PASS END=207195903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 207195904 . G . PASS END=207195909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 207195910 . G . PASS END=207195912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 207195913 . G . PASS END=207195915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:28,0 chr1 207195916 . T . PASS END=207195992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,853:0,69,255:26,0 chr1 207195993 . G . PASS END=207195993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 207195994 . C . PASS END=207196003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 207196004 . T . PASS END=207196005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 207196006 . C . PASS END=207196006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207196007 . T . PASS END=207196007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 207196008 . T . PASS END=207196015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 207196016 . G . PASS END=207196034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,765:0,50,255:19,0 chr1 207196035 . C . PASS END=207196035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207196036 . T . PASS END=207196063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,653:0,50,255:19,0 chr1 207196064 . C . PASS END=207196064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 207196065 . T . PASS END=207196103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,643:0,40,255:19,0 chr1 207196104 . C . PASS END=207196104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207196105 . A . PASS END=207196105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 207196106 . G . PASS END=207196106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:20,0 chr1 207196107 . G . PASS END=207196113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:22,0 chr1 207196114 . T . PASS END=207196114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,683:0,49,255:20,0 chr1 207196115 . C . PASS END=207196116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207196117 . C . PASS END=207196117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 207196118 . C . PASS END=207196123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207196124 . C . PASS END=207196125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 207196126 . G . PASS END=207196129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207196130 . C . PASS END=207196131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 207196132 . G . PASS END=207196132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207196133 . T . PASS END=207196133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 207196134 . G . PASS END=207196137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207196138 . C . PASS END=207196161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,653:0,43,255:19,0 chr1 207196162 . C . PASS END=207196174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr1 207196175 . T . PASS END=207196175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 207196176 . T . PASS END=207196182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr1 207196183 . C . PASS END=207196183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 207196184 . T . PASS END=207196192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,837:0,69,255:23,0 chr1 207196193 . C . PASS END=207196194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 207196195 . A . PASS END=207196201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 207196202 . G . PASS END=207196232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,676:0,41,255:19,0 chr1 207196233 . G . PASS END=207196233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 207196234 . G . PASS END=207196238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 207196239 . T . PASS END=207196239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 207196240 . A . PASS END=207196244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:15,0 chr1 207196245 . G . PASS END=207196245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 207196246 . C . PASS END=207196246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 207196247 . T . PASS END=207196247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 207196248 . G . PASS END=207196287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,537:0,40,255:19,0 chr1 207196288 . C . PASS END=207196288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 207196289 . T . PASS END=207196291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 207196292 . C . PASS END=207196297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207196298 . G . PASS END=207196298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 207196299 . A . PASS END=207196299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 207196300 . G . PASS END=207196301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,759:0,47,255:22,0 chr1 207196302 . C . PASS END=207196313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr1 207196314 . A . PASS END=207196314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:25,0 chr1 207196315 . G . PASS END=207196316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 207196317 . A . PASS END=207196319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 207196320 . C . PASS END=207196321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 207196322 . G . PASS END=207196324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr1 207196325 . G . PASS END=207196325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 207196326 . T . PASS END=207196329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1174:0,89,255:34,0 chr1 207196330 . G . PASS END=207196330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 207196331 . T . PASS END=207196337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:34,0 chr1 207196338 . G . PASS END=207196338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr1 207196339 . G . PASS END=207196339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1332:0,92,255:31,0 chr1 207196340 . T . PASS END=207196340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1234:0,69,255:31,0 chr1 207196341 . T . PASS END=207196344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr1 207196345 . A . PASS END=207196345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1191:0,77,255:33,0 chr1 207196346 . C . PASS END=207196457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1173:0,80,255:35,0 chr1 207196458 . C . PASS END=207196458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 207196459 . A . PASS END=207196463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 207196464 . G . PASS END=207196469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,74,255:27,0 chr1 207196470 . C . PASS END=207196476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:49:29:0,49,810:0,49,255:18,0 chr1 207196477 . T . PASS END=207196477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:18,0 chr1 207196478 . G . PASS END=207196514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,861:0,66,255:24,0 chr1 207196515 . G . PASS END=207196515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:26,0 chr1 207196516 . A . PASS END=207196519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 207196520 . G . PASS END=207196532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 207196533 . G . PASS END=207196539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 207196540 . G . PASS END=207196540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr1 207196541 . C . PASS END=207196541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 207196542 . A . PASS END=207196562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 207196563 . T . PASS END=207196563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr1 207196564 . G . PASS END=207196564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 207196565 . C . PASS END=207196565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 207196566 . C . PASS END=207196566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 207196567 . T . PASS END=207196584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:19,0 chr1 207196585 . T . PASS END=207196591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207196592 . C . PASS END=207196592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:18,0 chr1 207196593 . C . PASS END=207196593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207196594 . T . PASS END=207196594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 207196595 . G . PASS END=207196603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207196604 . C . PASS END=207196604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 207196605 . A . PASS END=207196608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 207196609 . T . PASS END=207196609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 207196610 . C . PASS END=207196630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,754:0,63,255:26,0 chr1 207196631 . C . PASS END=207196634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207196635 . A . PASS END=207196644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1030:0,68,255:26,0 chr1 207196645 . C . PASS END=207196646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 207196647 . G . PASS END=207196649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 207196650 . A . PASS END=207196651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207196652 . C . PASS END=207196683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,878:0,64,255:26,0 chr1 207196684 . C . PASS END=207196696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 207196697 . T . PASS END=207196698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 207196699 . T . PASS END=207196699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 207196700 . T . PASS END=207196700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,947:0,43,255:26,0 chr1 207196701 . C . PASS END=207196715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 207196716 . G . PASS END=207196729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,1000:0,70,255:26,0 chr1 207196730 . G . PASS END=207196740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 207196741 . T . PASS END=207196744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 207196745 . G . PASS END=207196752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 207196753 . G . PASS END=207196763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 207196764 . G . PASS END=207196764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207196765 . C . PASS END=207196785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:24,0 chr1 207196786 . G . PASS END=207196821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 207196822 . C . PASS END=207196825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 207198232 . C . PASS END=207198257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,825:0,61,255:25,0 chr1 207198258 . A . PASS END=207198258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 207198259 . G . PASS END=207198269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 207198270 . C . PASS END=207198272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 207198273 . C . PASS END=207198278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 207198279 . G . PASS END=207198284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207198285 . G . PASS END=207198292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 207198293 . A . PASS END=207198296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 207198297 . T . PASS END=207198297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 207198298 . C . PASS END=207198301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:30,0 chr1 207198302 . A . PASS END=207198302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr1 207198303 . G . PASS END=207198319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:31,0 chr1 207198320 . A . PASS END=207198320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 207198321 . G . PASS END=207198322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr1 207198323 . C . PASS END=207198323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 207198324 . T . PASS END=207198324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1055:0,46,255:29,0 chr1 207198325 . C . PASS END=207198325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 207198326 . C . PASS END=207198326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 207198327 . G . PASS END=207198327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 207198328 . T . PASS END=207198328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 207198329 . G . PASS END=207198329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 207198330 . T . PASS END=207198330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 207198331 . C . PASS END=207198332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 207198333 . A . PASS END=207198333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 207198334 . G . PASS END=207198334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 207198335 . T . PASS END=207198335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr1 207198336 . G . PASS END=207198339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1121:0,83,255:33,0 chr1 207198340 . C . PASS END=207198340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:32,0 chr1 207198341 . A . PASS END=207198341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1182:0,99,255:33,0 chr1 207198342 . A . PASS END=207198342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1090:0,68,255:32,0 chr1 207198343 . T . PASS END=207198345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:32,0 chr1 207198346 . T . PASS END=207198346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:30,0 chr1 207198347 . C . PASS END=207198353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:29,0 chr1 207198354 . A . PASS END=207198354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr1 207198355 . G . PASS END=207198355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 207198356 . G . PASS END=207198356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1037:0,46,255:25,0 chr1 207198357 . A . PASS END=207198357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 207198358 . A . PASS END=207198359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:25,0 chr1 207198360 . A . PASS END=207198376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:27:0,63,945:0,68,255:26,0 chr1 207198377 . T . PASS END=207198377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 207198378 . T . PASS END=207198378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 207198379 . C . PASS END=207198379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 207198380 . A . PASS END=207198380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,734:0,22,255:20,0 chr1 207198381 . G . PASS END=207198381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 207198382 . T . PASS END=207198382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:20,0 chr1 207198383 . G . PASS END=207198383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 207198384 . G . PASS END=207198384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 207198385 . A . PASS END=207198385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 207198386 . C . PASS END=207198387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 207198388 . G . PASS END=207198388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 207198389 . G . PASS END=207198394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,765:0,42,255:18,0 chr1 207198395 . G . PASS END=207198395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,676:0,11,255:15,0 chr1 207198396 . T . PASS END=207198398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:16,0 chr1 207198399 . C . PASS END=207198399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:14,0 chr1 207198400 . T . PASS END=207198401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:15,0 chr1 207198402 . C . PASS END=207198402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr1 207198403 . T . PASS END=207198403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,511:0,21,255:14,0 chr1 207198404 . A . PASS END=207198404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 207198405 . T . PASS END=207198405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:13,0 chr1 207198406 . C . PASS END=207198409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:17:0,37,568:0,37,255:13,0 chr1 207200839 . A . PASS END=207200932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:35:0,84,1260:0,95,255:40,0 chr1 207200933 . C . PASS END=207200943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,90,255:26,0 chr1 207222365 . T . PASS END=207223056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:36:0,92,1240:0,92,255:40,0 chr1 207223057 . T . PASS END=207223068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:33:0,72,1080:0,85,255:25,0 chr1 207224033 . C . PASS END=207224037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,609:0,43,255:19,0 chr1 207224038 . T . PASS END=207224057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:22,0 chr1 207224058 . A . PASS END=207224058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr1 207224059 . A . PASS END=207224072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 207224073 . G . PASS END=207224081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr1 207224082 . C . PASS END=207224082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 207224083 . A . PASS END=207224093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1093:0,90,255:31,0 chr1 207224094 . A . PASS END=207224094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr1 207224095 . G . PASS END=207224106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1108:0,80,255:29,0 chr1 207224107 . A . PASS END=207224107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 207224108 . G . PASS END=207224118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1109:0,80,255:29,0 chr1 207224119 . C . PASS END=207224119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 207224120 . C . PASS END=207224143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr1 207224144 . C . PASS END=207224149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 207224150 . T . PASS END=207224150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:23,0 chr1 207224151 . T . PASS END=207224165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:25:0,71,1008:0,71,255:26,0 chr1 207224166 . C . PASS END=207224166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 207224167 . C . PASS END=207224190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 207224191 . C . PASS END=207224191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 207224192 . C . PASS END=207224195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 207224196 . C . PASS END=207224196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 207224197 . A . PASS END=207224198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 207224199 . A . PASS END=207224255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,660:0,41,255:19,0 chr1 207224256 . G . PASS END=207224259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 207224260 . A . PASS END=207224262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 207224263 . G . PASS END=207224282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr1 207224283 . A . PASS END=207224283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 207224284 . G . PASS END=207224310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,886:0,72,255:24,0 chr1 207224311 . A . PASS END=207224311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:21,0 chr1 207224312 . C . PASS END=207224313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 207224314 . C . PASS END=207224314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 207224315 . C . PASS END=207224336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr1 207224337 . G . PASS END=207224361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,646:0,57,255:19,0 chr1 207224362 . G . PASS END=207224375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:13:0,39,459:0,39,255:13,0 chr1 207225530 . C . PASS END=207225580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:79:0,120,1800:0,191,255:40,0 chr1 207228063 . A . PASS END=207228147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,120,1800:0,134,255:40,0 chr1 207235298 . C . PASS END=207235423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:35:0,82,1350:0,82,255:40,0 chr1 207235892 . G . PASS END=207236061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:51:0,120,1800:0,140,255:40,0 chr1 207236488 . A . PASS END=207236554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:41:0,119,1621:0,119,255:40,0 chr1 207236692 . G . PASS END=207236766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:64:0,120,1800:0,175,255:40,0 chr1 207237118 . G . PASS END=207237174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,226,255:40,0 chr1 207238381 . G . PASS END=207238505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:35:0,92,1310:0,92,255:40,0 chr1 207240844 . G . PASS END=207240845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 207240846 . A . PASS END=207240846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 207240847 . T . PASS END=207240847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 207240848 . C . PASS END=207240848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 207240849 . T . PASS END=207240855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 207240856 . C . PASS END=207240856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 207240857 . A . PASS END=207240857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 207240858 . T . PASS END=207240861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,759:0,50,255:20,0 chr1 207240862 . G . PASS END=207240864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,774:0,50,255:20,0 chr1 207240865 . G . PASS END=207240865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 207240866 . A . PASS END=207240870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,771:0,58,255:19,0 chr1 207240871 . C . PASS END=207240877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 207240878 . C . PASS END=207240879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 207240880 . G . PASS END=207240888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr1 207240889 . A . PASS END=207240890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 207240891 . T . PASS END=207240891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 207240892 . C . PASS END=207240896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207240897 . G . PASS END=207240898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 207240899 . G . PASS END=207240899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207240900 . T . PASS END=207240900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 207240901 . C . PASS END=207240901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 207240902 . C . PASS END=207240903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1092:0,74,255:26,0 chr1 207240904 . G . PASS END=207240912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 207240913 . C . PASS END=207240913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 207240914 . C . PASS END=207240944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1058:0,90,255:36,0 chr1 207240945 . T . PASS END=207240945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr1 207240946 . C . PASS END=207240959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,108,1307:0,108,255:38,0 chr1 207240960 . G . PASS END=207240960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr1 207240961 . C . PASS END=207240981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1302:0,81,255:36,0 chr1 207240982 . T . PASS END=207240982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1150:0,31,255:30,0 chr1 207240983 . G . PASS END=207240990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1148:0,88,255:32,0 chr1 207240991 . C . PASS END=207240991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr1 207240992 . G . PASS END=207241012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1120:0,82,255:33,0 chr1 207241013 . A . PASS END=207241013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 207241014 . T . PASS END=207241015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 207241016 . G . PASS END=207241040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 207241041 . G . PASS END=207241041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 207241042 . G . PASS END=207241042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207241043 . G . PASS END=207241051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr1 207241508 . T . PASS END=207241643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:35:0,84,1260:0,100,255:40,0 chr1 207241644 . A . PASS END=207241644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1219:0,69,255:27,0 chr1 207241645 . G . PASS END=207241651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,92,255:28,0 chr1 207241652 . G . PASS END=207241652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 207241653 . C . PASS END=207241654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1039:0,84,255:28,0 chr1 207242769 . G . PASS END=207242873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:52:0,120,1800:0,152,255:40,0 chr1 207243625 . T . PASS END=207243630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 207243631 . C . PASS END=207243631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:26,0 chr1 207243632 . A . PASS END=207243638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 207243639 . G . PASS END=207243639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 207243640 . G . PASS END=207243732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1163:0,80,255:40,0 chr1 207243733 . T . PASS END=207243733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 207243734 . A . PASS END=207243744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1149:0,82,255:33,0 chr1 207243745 . A . PASS END=207243754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,990:0,90,255:25,0 chr1 207244533 . A . PASS END=207244595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1197:0,86,255:40,0 chr1 207244854 . G . PASS END=207244915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:37:0,96,1440:0,111,255:40,0 chr1 207244916 . A . PASS END=207244918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:64:38:0,64,1252:0,64,255:31,0 chr1 207245549 . A . PASS END=207245553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 207245554 . C . PASS END=207245581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:25,0 chr1 207245582 . A . PASS END=207245582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 207245583 . T . PASS END=207245594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,947:0,62,255:26,0 chr1 207245595 . G . PASS END=207245599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:27,0 chr1 207245600 . A . PASS END=207245602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 207245603 . C . PASS END=207245613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 207245614 . T . PASS END=207245631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:24:0,62,892:0,62,255:24,0 chr1 207245632 . T . PASS END=207245632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr1 207245633 . C . PASS END=207245635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 207245636 . A . PASS END=207245636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 207245637 . G . PASS END=207245660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:23,0 chr1 207245661 . C . PASS END=207245661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 207245662 . C . PASS END=207245665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 207245666 . A . PASS END=207245688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr1 207245689 . C . PASS END=207245689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 207245690 . C . PASS END=207245716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 207252299 . G . PASS END=207252307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 207252308 . A . PASS END=207252308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:24,0 chr1 207252309 . C . PASS END=207252330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,908:0,61,255:26,0 chr1 207252331 . C . PASS END=207252332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 207252333 . C . PASS END=207252344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,900:0,63,255:21,0 chr1 207252345 . C . PASS END=207252364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,643:0,40,255:19,0 chr1 207262877 . A . PASS END=207262934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:74:0,120,1800:0,198,255:40,0 chr1 207263653 . C . PASS END=207263653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 207263654 . A . PASS END=207263654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 207263655 . G . PASS END=207263661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr1 207263662 . G . PASS END=207263669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:25,0 chr1 207263670 . C . PASS END=207263670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 207263671 . T . PASS END=207263675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr1 207263676 . C . PASS END=207263676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 207263677 . C . PASS END=207263680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr1 207263681 . G . PASS END=207263684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 207263685 . A . PASS END=207263685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 207263686 . A . PASS END=207263686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 207263687 . T . PASS END=207263687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:29,0 chr1 207263688 . A . PASS END=207263703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1107:0,96,255:32,0 chr1 207263704 . A . PASS END=207263704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:30,0 chr1 207263705 . G . PASS END=207263798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:34:0,85,1129:0,85,255:40,0 chr1 207263799 . T . PASS END=207263821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,72,255:26,0 chr1 207263822 . C . PASS END=207263822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 207263823 . C . PASS END=207263825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 207263826 . T . PASS END=207263826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:22,0 chr1 207264989 . T . PASS END=207264989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 207264990 . G . PASS END=207265127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,959:0,87,255:40,0 chr1 207265128 . C . PASS END=207265132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 207265133 . C . PASS END=207265137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:28,0 chr1 207265138 . G . PASS END=207265165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,823:0,65,255:24,0 chr1 207269867 . G . PASS END=207269960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:34:0,85,1180:0,85,255:40,0 chr1 207271495 . G . PASS END=207271609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:33:0,82,1127:0,82,255:40,0 chr1 207273134 . C . PASS END=207273137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 207273138 . C . PASS END=207273138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 207273139 . C . PASS END=207273139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 207273140 . T . PASS END=207273225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:31:0,88,1111:0,88,255:40,0 chr1 207273226 . A . PASS END=207273226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1678:0,73,255:40,0 chr1 207273227 . T . PASS END=207273268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1308:0,81,255:40,0 chr1 207273269 . T . PASS END=207273269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr1 207273270 . T . PASS END=207273274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:35,0 chr1 207286371 . A . PASS END=207286506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1260:0,86,255:40,0 chr1 207286507 . T . PASS END=207286512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,87,255:22,0 chr1 207287445 . G . PASS END=207287608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,1155:0,87,255:40,0 chr1 207287609 . G . PASS END=207287609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr1 207287610 . T . PASS END=207287616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:29,0 chr1 207287617 . C . PASS END=207287619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr1 207287620 . C . PASS END=207287620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:24,0 chr1 207287621 . T . PASS END=207287622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 207287623 . C . PASS END=207287625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,855:0,48,255:20,0 chr1 207287626 . T . PASS END=207287626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:19,0 chr1 207287627 . A . PASS END=207287627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:18,0 chr1 207287628 . T . PASS END=207287629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,61,255:20,0 chr1 207287630 . T . PASS END=207287630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 207288761 . A . PASS END=207288860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,131,255:40,0 chr1 207297267 . A . PASS END=207297352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,150,255:40,0 chr1 207297520 . T . PASS END=207297521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 207297522 . G . PASS END=207297523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1157:0,93,255:31,0 chr1 207297524 . C . PASS END=207297525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 207297526 . A . PASS END=207297621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,88,255:40,0 chr1 207297622 . G . PASS END=207297622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr1 207297623 . C . PASS END=207297642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1350:0,98,255:36,0 chr1 207297643 . C . PASS END=207297647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr1 207297648 . A . PASS END=207297657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:24,0 chr1 207297658 . C . PASS END=207297668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:18,0 chr1 207297669 . G . PASS END=207297669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:14,0 chr1 207297670 . A . PASS END=207297679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:17,0 chr1 207297680 . T C, 101.18 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,5,0:0,13,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,13:0,0,12,6 chr1 207297681 . G . PASS END=207297693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 207297694 . G . PASS END=207297694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 207297695 . C . PASS END=207297699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 207297700 . C . PASS END=207297711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,34,255:13,0 chr1 207300058 . A . PASS END=207300221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:44:0,115,1435:0,115,255:40,0 chr1 207300222 . C . PASS END=207300240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,154,255:40,0 chr1 207304891 . A . PASS END=207304899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,111,1665:0,114,255:40,0 chr1 207304900 . T C, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.425;ReadPosRankSum=3.586;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,23,0:0.561,0.000:41:7,14,0:11,9,0:48:85,0,49,815,636,1450:255,0,255:18,0:5.0000e+01,7.2740e-05,5.1709e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,6,14,9:9,9,15,8 chr1 207304901 . T . PASS END=207304937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,120,1800:0,126,255:40,0 chr1 207304938 . T . PASS END=207305073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:37:0,81,1215:0,107,255:40,0 chr1 207305074 . A . PASS END=207305081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:29:0,60,900:0,87,255:25,0 chr1 207305082 . G . PASS END=207305085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:26:0,54,810:0,62,255:19,0 chr1 207307749 . C . PASS END=207307923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:35:0,81,1215:0,88,255:40,0 chr1 207307924 . A . PASS END=207307934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:29:0,63,945:0,87,255:26,0 chr1 207307935 . A . PASS END=207307937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,69,255:18,0 chr1 207314451 . T . PASS END=207314452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,959:0,76,255:30,0 chr1 207314453 . T . PASS END=207314458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1081:0,93,255:32,0 chr1 207314459 . T . PASS END=207314459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 207314460 . T . PASS END=207314611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:31:0,80,1133:0,80,255:40,0 chr1 207314612 . C . PASS END=207314621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,83,255:25,0 chr1 207317163 . C . PASS END=207317188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1197:0,85,255:39,1 chr1 207317189 . A . PASS END=207317189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:69:40:0,69,1384:0,69,255:38,1 chr1 207317190 . A . PASS END=207317338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:32:0,88,1350:0,88,255:40,2 chr1 207317889 . G . PASS END=207317894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:25,0 chr1 207317895 . C . PASS END=207317899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207317900 . A . PASS END=207317900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 207317901 . G . PASS END=207318021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1072:0,90,255:40,0 chr1 207318022 . G . PASS END=207318047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:24:0,60,900:0,72,255:26,0 chr1 207318048 . G . PASS END=207318062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,706:0,46,255:19,0 chr1 207495111 . A . PASS END=207495128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr1 207495129 . A . PASS END=207495144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:23,0 chr1 207495145 . T . PASS END=207495145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 207495146 . G . PASS END=207495158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,969:0,75,255:26,0 chr1 207495159 . G . PASS END=207495163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 207495164 . G . PASS END=207495164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 207495165 . C . PASS END=207495177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 207495178 . T . PASS END=207495178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 207495179 . G . PASS END=207495179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207495180 . C . PASS END=207495198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,908:0,61,255:25,0 chr1 207495199 . C . PASS END=207495210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,52,255:19,0 chr1 207495581 . A . PASS END=207495581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207495582 . G . PASS END=207495595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1180:0,93,255:32,0 chr1 207495596 . A . PASS END=207495596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:26,0 chr1 207495597 . G . PASS END=207495611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr1 207495612 . A . PASS END=207495612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 207495613 . A . PASS END=207495624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:29,0 chr1 207495625 . T . PASS END=207495625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr1 207495626 . C . PASS END=207495634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 207495727 . G . PASS END=207495739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:35,0 chr1 207495740 . T . PASS END=207495740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr1 207495741 . C . PASS END=207495757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1251:0,91,255:39,0 chr1 207495758 . T . PASS END=207495758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1320:0,68,255:36,0 chr1 207495759 . G . PASS END=207495865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:33:0,90,1289:0,93,255:40,0 chr1 207495866 . C . PASS END=207495891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,961:0,75,255:26,0 chr1 207495892 . A . PASS END=207495903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:50:21:0,50,759:0,50,255:19,0 chr1 207495904 . T . PASS END=207495907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207495908 . C . PASS END=207495912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr1 207497903 . G . PASS END=207498095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:29:0,80,1141:0,80,255:40,0 chr1 207498967 . A . PASS END=207499066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,125,255:40,0 chr1 207500097 . G . PASS END=207500132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,120,1800:0,123,255:40,0 chr1 207500133 . T . PASS END=207500133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:76:54:0,76,1839:0,76,255:40,0 chr1 207500134 . A . PASS END=207500182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:39:0,87,1364:0,87,255:40,0 chr1 207504453 . A . PASS END=207504614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:38:0,103,1300:0,103,255:40,0 chr1 207504615 . G . PASS END=207504615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:76:53:0,76,1629:0,76,255:36,0 chr1 207504616 . G . PASS END=207504631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,105,1575:0,114,255:40,0 chr1 207504632 . G . PASS END=207504641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:35,0 chr1 207510038 . G . PASS END=207510251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:89:35:0,89,1295:0,89,255:40,0 chr1 207510252 . A . PASS END=207510288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:65:0,120,1800:0,181,255:40,0 chr1 207510292 . A . PASS END=207510326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,167,255:40,0 chr1 207510327 . C . PASS END=207510510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,159,255:40,0 chr1 207510511 . A . PASS END=207510547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,137,255:40,0 chr1 207510548 . A G, 203.04 PASS DP=52;MQ=249.72;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,22,0:0,30,0:153:241,156,0,1981,156,1981:255,156,0:0,0:2.0304e+02,1.5304e+02,0.0000e+00,4.5000e+02,1.8781e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,32:0,0,24,28 chr1 207510549 . A . PASS END=207510595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,125,255:40,0 chr1 207510596 . G A, 203.51 PASS DP=53;MQ=249.73;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,22,0:0,30,0:154:241,157,0,2016,157,2016:255,162,0:0,0:2.0351e+02,1.5351e+02,0.0000e+00,4.5000e+02,1.8828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,31:0,0,29,23 chr1 207510597 . T . PASS END=207510633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,120,255:40,0 chr1 207510634 . C . PASS END=207510754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,121,255:40,0 chr1 207512742 . G . PASS END=207512762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,165,255:40,0 chr1 207513855 . T . PASS END=207513862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr1 207513863 . A . PASS END=207513863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 207513864 . C . PASS END=207513865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 207513866 . A . PASS END=207513866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 207513867 . C . PASS END=207513879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 207513880 . T . PASS END=207513880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 207513881 . T . PASS END=207513884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 207513885 . A . PASS END=207513885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 207513886 . A . PASS END=207513888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 207513889 . T . PASS END=207513889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 207513890 . T . PASS END=207513891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 207513892 . T . PASS END=207513892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 207513893 . T . PASS END=207513897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 207513898 . G . PASS END=207513898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 207513899 . T . PASS END=207513905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 207513906 . A . PASS END=207513906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr1 207513907 . G . PASS END=207513908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 207513909 . A . PASS END=207513912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 207513913 . T . PASS END=207513924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,623:0,45,255:18,0 chr1 207513925 . C . PASS END=207513925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 207513926 . A . PASS END=207513955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,660:0,43,255:19,0 chr1 207513956 . A . PASS END=207513956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:18,2 chr1 207513957 . T . LowGQ END=207513957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:9,0,255:18,2 chr1 207513958 . T . PASS END=207513958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:19,0 chr1 207513959 . T . PASS END=207513967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,631:0,57,255:19,0 chr1 207513968 . T . PASS END=207513968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 207513969 . C . PASS END=207513987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,609:0,44,255:19,0 chr1 207513988 . A . PASS END=207513989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,57,255:12,0 chr1 207520477 . G . PASS END=207520516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,117,1355:0,120,255:40,0 chr1 207527352 . C . PASS END=207527425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,100,1643:0,100,255:40,0 chr1 207532891 . G . PASS END=207532891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 207532892 . G . PASS END=207532912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1103:0,80,255:40,0 chr1 207532913 . A . PASS END=207533014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:36:0,90,1205:0,91,255:40,0 chr1 207546114 . A . PASS END=207546114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 207546115 . A . PASS END=207546115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 207546116 . T . PASS END=207546124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:29,0 chr1 207546125 . G . PASS END=207546125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 207546126 . A . PASS END=207546214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1118:0,90,255:40,0 chr1 207546215 . A . PASS END=207546215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:29,0 chr1 207546216 . A . PASS END=207546216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 207558567 . C . PASS END=207558583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:77:0,120,1800:0,202,255:40,0 chr1 207627764 . A . PASS END=207627784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 207627785 . G . PASS END=207627785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 207627786 . G . PASS END=207627794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 207627795 . T . PASS END=207627795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:16,0 chr1 207627796 . G . PASS END=207627808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 207627809 . C . PASS END=207627811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 207627812 . G . PASS END=207627821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 207639871 . G . PASS END=207639876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,899:0,75,255:26,0 chr1 207639877 . C . PASS END=207639878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 207639879 . T . PASS END=207639879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 207639880 . G . PASS END=207639881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 207639882 . G . PASS END=207639887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,894:0,64,255:25,0 chr1 207639888 . C . PASS END=207640232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1170:0,89,255:40,0 chr1 207640233 . A . PASS END=207640233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:30,0 chr1 207640234 . C . PASS END=207640236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1350:0,98,255:31,0 chr1 207640237 . G . PASS END=207640238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,91,255:26,0 chr1 207640239 . C . PASS END=207640242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,92,255:27,0 chr1 207640243 . C . PASS END=207640257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,893:0,64,255:26,0 chr1 207640263 . T . PASS END=207640264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 207641872 . T . PASS END=207641886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr1 207641887 . G . PASS END=207641928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:28:0,83,1033:0,83,255:40,0 chr1 207641929 . A . PASS END=207641929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:40,0 chr1 207641930 . G . PASS END=207641950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1627:0,116,255:40,0 chr1 207641951 . A . PASS END=207641951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1466:0,77,255:38,0 chr1 207641952 . G . PASS END=207642047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:38:0,80,1215:0,80,255:40,0 chr1 207642048 . C . PASS END=207642053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:33:0,66,990:0,82,255:26,0 chr1 207642054 . T . PASS END=207642061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,85,255:28,0 chr1 207642145 . A . PASS END=207642244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,113,1422:0,113,255:40,0 chr1 207642495 . G . PASS END=207642577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:42:0,99,1545:0,99,255:40,0 chr1 207643036 . C . PASS END=207643036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 207643040 . A . PASS END=207643051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1056:0,90,255:31,0 chr1 207643052 . C . PASS END=207643052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:30,0 chr1 207643053 . A . PASS END=207643154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1305:0,93,255:40,0 chr1 207643155 . A . PASS END=207643155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:31,0 chr1 207643156 . G . PASS END=207643157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 207643158 . A . PASS END=207643158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:31,0 chr1 207643159 . G . PASS END=207643187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:33,0 chr1 207643188 . T . PASS END=207643201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,1031:0,60,255:26,0 chr1 207643202 . T . PASS END=207643202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,868:0,37,255:21,0 chr1 207643203 . T . PASS END=207643223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,908:0,61,255:26,0 chr1 207643224 . C . PASS END=207643224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207643225 . T . PASS END=207643225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 207643226 . G . PASS END=207643227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207643228 . A . PASS END=207643229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 207643230 . T . PASS END=207643273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1150:0,80,255:34,0 chr1 207643274 . G . PASS END=207643274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:34,0 chr1 207643275 . T . PASS END=207643348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1149:0,84,255:40,0 chr1 207643349 . T . PASS END=207643349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1079:0,75,255:31,0 chr1 207643350 . A . PASS END=207643410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1176:0,91,255:36,0 chr1 207643411 . G . PASS END=207643424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:27:0,66,990:0,71,255:26,0 chr1 207643425 . A . PASS END=207643443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:19:0,48,720:0,56,255:19,0 chr1 207643444 . A . PASS END=207643444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:14,0 chr1 207643445 . A . PASS END=207643448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 207644085 . A . PASS END=207644262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,969:0,84,255:40,0 chr1 207644267 . A . PASS END=207644267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 207644342 . T . PASS END=207644432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:86:46:0,86,1590:0,86,255:40,0 chr1 207644768 . G . PASS END=207644844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,150,255:40,0 chr1 207646117 . A . PASS END=207646498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:34:0,89,1249:0,89,255:40,0 chr1 207646499 . T . PASS END=207646499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:26:42:0,26,1373:0,26,255:32,0 chr1 207646500 . C . PASS END=207646522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1113:0,83,255:34,0 chr1 207646523 . A . PASS END=207646523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr1 207646524 . G . PASS END=207646524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:32,0 chr1 207646890 . G . PASS END=207647066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,992:0,81,255:40,0 chr1 207647146 . A . PASS END=207647230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,102,1684:0,102,255:40,0 chr1 207647586 . G . PASS END=207647668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,120,1800:0,174,255:40,0 chr1 207648169 . T . PASS END=207648518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:36:0,107,1343:0,107,255:40,0 chr1 207648519 . G . PASS END=207648541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:34:0,90,1350:0,102,255:40,0 chr1 207648542 . G . PASS END=207648542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:29,0 chr1 207648543 . C . PASS END=207648555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 207648556 . A G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.539;ReadPosRankSum=3.442;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,16,0:0.552,0.000:29:5,8,0:8,8,0:41:85,0,38,486,436,922:255,0,255:12,0:5.0000e+01,3.5672e-04,4.1419e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,13,4,12:8,5,6,10 chr1 207648557 . A . PASS END=207648561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 207649579 . C . PASS END=207649579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 207649580 . C . PASS END=207649580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr1 207649581 . T . PASS END=207649754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:35:0,87,1305:0,95,255:40,0 chr1 207649755 . C . PASS END=207649764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,932:0,60,255:25,0 chr1 207649768 . C . PASS END=207649768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:18,0 chr1 207651227 . C . PASS END=207651227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 207651230 . A . PASS END=207651230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 207651231 . G . PASS END=207651245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,904:0,81,255:30,0 chr1 207651246 . A . PASS END=207651246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:28,0 chr1 207651247 . C . PASS END=207651247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 207651248 . C . PASS END=207651248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 207651249 . A . PASS END=207651366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:30:0,85,1125:0,85,255:40,0 chr1 207651367 . T . PASS END=207651367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr1 207651368 . G . PASS END=207651375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 207651376 . G . PASS END=207651376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 207651377 . A . PASS END=207651378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207651379 . C . PASS END=207651392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:26,0 chr1 207651393 . T . PASS END=207651407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,510:0,43,255:19,0 chr1 207651408 . C . PASS END=207651408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,620:0,5,255:16,0 chr1 207651409 . A . PASS END=207651415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 207652602 . G . PASS END=207652625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,218,255:40,0 chr1 207652631 . T . PASS END=207652631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 207653323 . G . PASS END=207653357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,212,255:40,0 chr1 207653358 . A . PASS END=207653394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,134,255:40,0 chr1 207653395 . C A, 235.22 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,33,0:0,30,0:185:273,188,0,2347,188,2347:255,189,0:0,0:2.3522e+02,1.8522e+02,0.0000e+00,4.5000e+02,2.1999e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,48:0,0,35,28 chr1 207653396 . A . PASS END=207653398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 207658809 . C . PASS END=207658899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,164,255:40,0 chr1 207669598 . A . PASS END=207669604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:40:0,85,1333:0,85,255:40,0 chr1 207669605 . T . PASS END=207669605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1371:0,73,255:37,0 chr1 207669606 . G . PASS END=207669636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:41:0,85,1432:0,85,255:40,0 chr1 207669637 . C . PASS END=207669637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:32,0 chr1 207669638 . C . PASS END=207669721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1041:0,82,255:39,0 chr1 207669722 . C . PASS END=207669729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,74,255:22,0 chr1 207669730 . T . PASS END=207669733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,68,255:17,0 chr1 207679249 . G . PASS END=207679306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:32:0,96,1174:0,96,255:40,0 chr1 207679307 . A G,C, 48.77 PASS DP=52;MQ=123.26;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,25,0,0:0.481,0.000,0.000:52:17,12,0,0:10,13,0,0:46:84,0,47,897,913,944,1044,1044,1044,1044:255,0,255:27,0:4.8766e+01,1.0380e-04,4.9750e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78,34.77,69.54,69.54,37.78:15,12,20,5:15,12,9,16 chr1 207679308 . T . PASS END=207679344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:52:0,105,1482:0,105,255:40,0 chr1 207679345 . G . PASS END=207679412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:36:0,84,1260:0,95,255:40,0 chr1 207679413 . A . PASS END=207679423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,71,255:26,0 chr1 207679424 . C . PASS END=207679428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,78,255:15,0 chr1 207680059 . G . PASS END=207680061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 207680062 . A . PASS END=207680062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 207680063 . A . PASS END=207680066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1074:0,87,255:30,0 chr1 207680067 . T . PASS END=207680067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 207680068 . G . PASS END=207680075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr1 207680076 . C . PASS END=207680076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr1 207680077 . C . PASS END=207680158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:32:0,86,1233:0,86,255:40,0 chr1 207684914 . A . PASS END=207684999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,99,1512:0,99,255:40,0 chr1 207696956 . G . PASS END=207696960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1241:0,89,255:35,0 chr1 207696961 . C . PASS END=207696961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:34,0 chr1 207696962 . C . PASS END=207697193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:34:0,85,1128:0,85,255:40,0 chr1 207697194 . T . PASS END=207697194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:28,0 chr1 207697195 . G . PASS END=207697206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1155:0,80,255:30,0 chr1 207697207 . A . PASS END=207697207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,942:0,37,255:26,0 chr1 207697208 . T . PASS END=207697208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 207697209 . A . PASS END=207697213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1070:0,74,255:26,0 chr1 207697214 . T . PASS END=207697214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:25,0 chr1 207697215 . A . PASS END=207697216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,978:0,70,255:26,0 chr1 207697217 . C . PASS END=207697218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207697219 . G . PASS END=207697219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 207697220 . A . PASS END=207697226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 207697227 . A . PASS END=207697228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:29:0,52,939:0,52,255:28,0 chr1 207697229 . G . PASS END=207697237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1127:0,90,255:31,0 chr1 207697238 . C . PASS END=207697238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 207697239 . C . PASS END=207697240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 207697241 . T . PASS END=207697241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:28,0 chr1 207697242 . A . PASS END=207697256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1170:0,93,255:31,0 chr1 207697257 . G . PASS END=207697257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr1 207697258 . T . PASS END=207697261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1045:0,85,255:32,0 chr1 207697262 . G . PASS END=207697262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:31,0 chr1 207697263 . G . PASS END=207697266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:32,0 chr1 207697267 . C . PASS END=207697267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 207697268 . A . PASS END=207697354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1155:0,80,255:34,0 chr1 207700098 . T . PASS END=207700099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,743:0,60,255:22,0 chr1 207700100 . T . PASS END=207700100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 207700101 . G . PASS END=207700101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 207700102 . T . PASS END=207700102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 207700103 . C . PASS END=207700114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,817:0,69,255:26,0 chr1 207700115 . G . PASS END=207700116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr1 207700117 . T . PASS END=207700117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,906:0,37,255:24,0 chr1 207700118 . G . PASS END=207700130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1153:0,80,255:31,0 chr1 207700131 . A . PASS END=207700131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:30,0 chr1 207700132 . G . PASS END=207700164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1089:0,86,255:34,0 chr1 207700165 . T . PASS END=207700165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr1 207700166 . G . PASS END=207700180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 207700181 . T . PASS END=207700183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 207700184 . A . PASS END=207700195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 207700196 . G . PASS END=207700196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 207700197 . G . PASS END=207700201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 207700202 . G . PASS END=207700202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 207700203 . A . PASS END=207700203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 207700204 . C . PASS END=207700222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr1 207700223 . A . PASS END=207700230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:21:0,50,774:0,50,255:19,0 chr1 207700231 . C . PASS END=207700231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 207700232 . A . PASS END=207700248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,623:0,43,255:18,0 chr1 207700249 . G . PASS END=207700269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,32,255:13,0 chr1 207700270 . T . PASS END=207700270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr1 207700271 . G . PASS END=207700273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 207700274 . G . PASS END=207700274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 207700366 . T . PASS END=207700383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 207700384 . T . PASS END=207700384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 207700385 . C . PASS END=207700387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 207700388 . G . PASS END=207700388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr1 207700389 . G . PASS END=207700393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,197:0,21,197:7,0 chr1 207700394 . A . PASS END=207700394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 207700395 . C . PASS END=207700398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,243:8,0 chr1 207700399 . T . PASS END=207700400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:6,0 chr1 207700401 . A . PASS END=207700407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 207700408 . G . PASS END=207700468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr1 207702061 . A . LowDepth;LowGQ END=207702146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207705525 . A . LowDepth;LowGQ END=207705743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207706754 . G . LowDepth;LowGQ END=207706933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207707542 . G . LowDepth;LowGQ END=207707641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207713326 . G . LowDepth;LowGQ END=207713411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207715527 . G . LowDepth;LowGQ END=207715648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207715649 . G . LowDepth END=207715702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr1 207715703 . G . LowDepth END=207715739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 207715740 . T C, 5.47 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=15.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4709e+00,4.4660e+00,4.4563e+00,4.0241e+01,3.9236e+01,4.3241e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,0:0,0,1,0 chr1 207715741 . A . PASS END=207715777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,31:0,3,31:2,0 chr1 207715778 . A . PASS END=207715925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,31:0,3,31:3,0 chr1 207718653 . T . PASS END=207718788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:84:39:0,84,1260:0,117,255:40,0 chr1 207718789 . A . PASS END=207718798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:60:37:0,60,900:0,78,255:24,2 chr1 207718799 . G . PASS END=207718812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr1 207718813 . A . PASS END=207718820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,51,255:12,0 chr1 207718821 . C . PASS END=207718829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 207718834 . C . PASS END=207718834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 207718921 . T . PASS END=207718940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,164:5,0 chr1 207718941 . A . PASS END=207718967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr1 207718968 . C . PASS END=207718975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 207718976 . A . PASS END=207718976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 207718977 . G . PASS END=207718989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,197:0,21,197:7,0 chr1 207718990 . T . PASS END=207718990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 207718991 . T . PASS END=207718995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 207718996 . C . PASS END=207718996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 207718997 . A . PASS END=207718997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 207718998 . A . PASS END=207718998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 207718999 . A . PASS END=207719018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,181:0,21,181:7,0 chr1 207719019 . G . PASS END=207719023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 207720616 . A . LowDepth;LowGQ END=207720701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207724080 . A . LowDepth;LowGQ END=207724298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207725309 . G . LowDepth;LowGQ END=207725488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207726097 . G . PASS END=207726098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr1 207726099 . A . PASS END=207726099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 207726100 . A . PASS END=207726123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,778:0,66,255:23,0 chr1 207726124 . C . PASS END=207726124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:19,0 chr1 207726125 . A . PASS END=207726126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 207726127 . T . PASS END=207726129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:19,0 chr1 207726130 . A . PASS END=207726131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 207726132 . G . PASS END=207726132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:20,0 chr1 207726133 . G . PASS END=207726133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 207726134 . C . PASS END=207726160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,52,255:19,0 chr1 207726161 . G T, 1.53 DRAGENSnpHardQUAL DP=18;MQ=11.37;MQRankSum=2.071;ReadPosRankSum=2.920;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:14,4,0:0.222,0.000:18:9,4,0:5,0,0:5:31,0,14,127,472,599:85,0,255:12,0:1.5327e+00,5.3530e+00,2.2353e+01,1.3237e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,12,0,4:5,9,0,4 chr1 207726162 . G . PASS END=207726162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 207726163 . T . PASS END=207726173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr1 207726174 . A . PASS END=207726196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,31,255:13,0 chr1 207731883 . G . LowDepth;LowGQ END=207731968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207734084 . G . LowDepth;LowGQ END=207734482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207737209 . T . PASS END=207737229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:26,0 chr1 207737230 . T . PASS END=207737236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr1 207737237 . T . PASS END=207737237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 207737238 . G . PASS END=207737269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1055:0,84,255:33,0 chr1 207737270 . T . PASS END=207737270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1102:0,52,255:31,0 chr1 207737271 . T . PASS END=207737311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1150:0,83,255:36,0 chr1 207737312 . T . PASS END=207737312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr1 207737313 . G . PASS END=207737326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1149:0,82,255:33,0 chr1 207737327 . T . PASS END=207737327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 207737328 . G . PASS END=207737333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 207737334 . A . PASS END=207737336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 207737337 . C . PASS END=207737343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 207737344 . C . PASS END=207737352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr1 207737353 . G . PASS END=207737366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,673:0,41,255:19,0 chr1 207737367 . G . PASS END=207737367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 207737368 . C . PASS END=207737380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 207737381 . T . PASS END=207737381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,515:0,20,255:15,0 chr1 207737382 . G . PASS END=207737384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 207737385 . G . PASS END=207737385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 207737477 . T . PASS END=207737487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 207737488 . G . PASS END=207737496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:17,0 chr1 207737497 . A . PASS END=207737497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 207737498 . T . PASS END=207737498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 207737499 . G . PASS END=207737508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,599:0,44,255:19,0 chr1 207737509 . C . PASS END=207737513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 207737514 . T . PASS END=207737514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 207737515 . G . PASS END=207737537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:23,0 chr1 207737538 . T . PASS END=207737538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,787:0,48,255:22,0 chr1 207737539 . C . PASS END=207737539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 207737540 . T . PASS END=207737540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 207737541 . C . PASS END=207737543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 207737544 . G . PASS END=207737544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:23,0 chr1 207737545 . C . PASS END=207737547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,887:0,67,255:27,0 chr1 207737548 . G . PASS END=207737549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:26,0 chr1 207737550 . A . PASS END=207737554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 207737555 . A . PASS END=207737555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,871:0,67,255:27,0 chr1 207737556 . A . PASS END=207737557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,922:0,84,255:28,0 chr1 207737558 . T . PASS END=207737558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,923:0,53,255:27,0 chr1 207737559 . G . PASS END=207737566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,900:0,84,255:29,0 chr1 207737567 . T . PASS END=207737567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,804:0,53,255:26,0 chr1 207737568 . T . PASS END=207737570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 207737571 . T . PASS END=207737571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,892:0,37,255:24,0 chr1 207737572 . G . PASS END=207737572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 207737573 . A . PASS END=207737573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:26,0 chr1 207737574 . T . PASS END=207737579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,919:0,67,255:26,0 chr1 207739183 . A . PASS END=207739268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,176,255:40,0 chr1 207741169 . A . PASS END=207741387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:31:0,83,1139:0,83,255:40,0 chr1 207742404 . G . LowDepth;LowGQ END=207742583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207743192 . G . LowDepth;LowGQ END=207743291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 207748940 . G . PASS END=207749025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,175,255:40,1 chr1 207751150 . G . PASS END=207751548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:43:0,89,1549:0,89,255:40,0 chr1 207753585 . T . PASS END=207753620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,100,1357:0,100,255:40,0 chr1 207753621 . A G, 50.00 PASS DP=46;MQ=142.98;MQRankSum=1.687;ReadPosRankSum=-0.351;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,31,0:0.674,0.000:46:9,19,0:6,12,0:42:85,0,39,1107,528,1636:255,0,255:15,0:5.0000e+01,3.0106e-04,4.2268e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,17,14:6,9,15,16 chr1 207753622 . T . PASS END=207753658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,125,255:40,0 chr1 207753659 . G . PASS END=207753735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1215:0,99,255:40,0 chr1 207753736 . G . PASS END=207753737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 207753738 . G . PASS END=207753747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 207753748 . C . PASS END=207753749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1063:0,52,255:24,0 chr1 207753750 . C . PASS END=207753755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr1 207753756 . G . PASS END=207753760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 207753761 . G . PASS END=207753761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207753856 . T . PASS END=207753856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr1 207753857 . G . PASS END=207753857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1350:0,71,255:38,0 chr1 207753858 . A . PASS END=207753860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:41:0,93,1403:0,93,255:40,0 chr1 207753861 . T . PASS END=207753861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:24:43:0,24,1231:0,24,255:37,0 chr1 207753862 . C . PASS END=207753866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:43:0,96,1399:0,96,255:40,0 chr1 207753867 . G . PASS END=207753867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1402:0,79,255:40,0 chr1 207753868 . A . PASS END=207753869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,104,1562:0,104,255:40,0 chr1 207753870 . G . PASS END=207753870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:16:45:0,16,1363:0,16,255:40,0 chr1 207753871 . A . PASS END=207753871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1532:0,118,255:40,0 chr1 207753872 . C . PASS END=207753872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:52:46:0,52,1438:0,52,255:40,0 chr1 207753873 . T . PASS END=207753877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:82:46:0,82,1440:0,82,255:40,0 chr1 207753878 . G . PASS END=207753884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:94:46:0,94,1524:0,94,255:40,0 chr1 207753885 . C . PASS END=207753885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:67:50:0,67,1512:0,67,255:40,0 chr1 207753886 . T . PASS END=207753886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:56:50:0,56,1524:0,56,255:40,0 chr1 207753887 . C . PASS END=207753889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,117,1782:0,117,255:40,0 chr1 207753890 . T . PASS END=207753890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:59:54:0,59,1632:0,59,255:40,0 chr1 207753891 . C . PASS END=207753897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:90:54:0,90,1748:0,90,255:40,0 chr1 207753898 . G . PASS END=207753898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1780:0,71,255:40,0 chr1 207753899 . T . PASS END=207753958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:83:43:0,83,1395:0,83,255:40,0 chr1 207755263 . G . PASS END=207755348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:58:0,120,1800:0,173,255:40,0 chr1 207757994 . A . PASS END=207757996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:28,0 chr1 207757997 . T . PASS END=207757997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 207757998 . C . PASS END=207758009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,979:0,84,255:29,0 chr1 207758010 . T . PASS END=207758010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 207758011 . C . PASS END=207758029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1111:0,82,255:33,0 chr1 207758030 . G . PASS END=207758030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr1 207758031 . G . PASS END=207758194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:95:36:0,95,1357:0,95,255:40,0 chr1 207758195 . C . PASS END=207758221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,117,1755:0,129,255:40,0 chr1 207760731 . G . PASS END=207760734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr1 207760735 . C . PASS END=207760909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:27:0,80,902:0,80,255:40,0 chr1 207760910 . C . PASS END=207760910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1467:0,52,255:27,0 chr1 207762020 . G . PASS END=207762119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:56:0,120,1800:0,140,255:40,0 chr1 207780596 . G . PASS END=207780681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:53:0,120,1800:0,147,255:40,0 chr1 207782635 . T . PASS END=207782878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:36:0,105,1327:0,106,255:40,0 chr1 207782879 . A . PASS END=207782915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,136,255:40,0 chr1 207782916 . A T, 199.11 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,24,0:0,27,0:149:237,152,0,1874,152,1874:255,153,0:0,0:1.9911e+02,1.4911e+02,0.0000e+00,4.5000e+02,1.8388e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,33:0,0,29,22 chr1 207782917 . C . PASS END=207782930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,134,255:40,0 chr1 207782931 . A G, 49.82 PASS DP=48;MQ=250.00;MQRankSum=5.923;ReadPosRankSum=1.011;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,23,0:0.479,0.000:48:11,14,0:14,9,0:48:85,0,50,778,878,1656:255,0,255:24,0:4.9821e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,19,8,15:12,13,9,14 chr1 207782932 . T . PASS END=207782968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:45:0,96,1440:0,102,255:40,0 chr1 207782969 . G . PASS END=207782975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:46:0,93,1395:0,122,255:33,0 chr1 207782976 . A . PASS END=207782999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,831:0,69,255:26,0 chr1 207783000 . A . PASS END=207783000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 207783001 . G . PASS END=207783009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,853:0,69,255:23,0 chr1 207783010 . C . PASS END=207783033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr1 207785022 . T . PASS END=207785024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:18,0 chr1 207785025 . G . PASS END=207785025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 207785026 . T . PASS END=207785031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 207785032 . G . LowGQ END=207785032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:16,0 chr1 207785033 . C . PASS END=207785033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 207785034 . C . PASS END=207785034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 207785035 . T . PASS END=207785054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,659:0,51,255:18,0 chr1 207785055 . A . PASS END=207785060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:23,0 chr1 207785061 . C . PASS END=207785103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:30,0 chr1 207785104 . C . PASS END=207785104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 207785105 . T . PASS END=207785175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1094:0,83,255:33,0 chr1 207785176 . C . PASS END=207785176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 207785177 . C . PASS END=207785181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 207785182 . A . PASS END=207785198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 207785284 . T . PASS END=207785302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr1 207785303 . C . PASS END=207785305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207785306 . G . PASS END=207785308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 207785309 . C . PASS END=207785309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207785310 . C . PASS END=207785310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,848:0,51,255:25,0 chr1 207785311 . A . PASS END=207785312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,960:0,87,255:29,0 chr1 207785313 . C . PASS END=207785313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr1 207785314 . T . PASS END=207785314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 207785315 . C . PASS END=207785315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 207785316 . C . PASS END=207785344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:30,0 chr1 207785345 . T . PASS END=207785345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,931:0,29,255:27,0 chr1 207785346 . C . PASS END=207785350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 207785351 . G . PASS END=207785351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 207785352 . C . PASS END=207785354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 207785355 . G . PASS END=207785386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:26,0 chr1 207787749 . G . PASS END=207787834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:38:0,81,1215:0,113,255:40,0 chr1 207789920 . A . PASS END=207789937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,730:0,66,255:24,0 chr1 207789938 . C . PASS END=207789938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 207789939 . T . PASS END=207789941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 207789942 . A . PASS END=207789942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 207789943 . G . PASS END=207789961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,870:0,72,255:26,0 chr1 207789962 . A . PASS END=207789969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:30,0 chr1 207789970 . A . PASS END=207789970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,951:0,76,255:30,0 chr1 207789971 . C . PASS END=207789982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1180:0,93,255:31,0 chr1 207789983 . A . PASS END=207789983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,914:0,62,255:29,0 chr1 207789984 . T . PASS END=207789984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 207789985 . A . PASS END=207790006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:29:0,60,975:0,60,255:26,0 chr1 207790007 . C . PASS END=207790018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:30,0 chr1 207790019 . A . PASS END=207790019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 207790020 . C . PASS END=207790020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 207790021 . A . PASS END=207790022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 207790023 . C . PASS END=207790050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1305:0,96,255:35,0 chr1 207790051 . C . PASS END=207790087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:97:36:0,97,1327:0,97,255:40,0 chr1 207790088 . C G, 50.00 PASS DP=37;MQ=166.86;MQRankSum=1.018;ReadPosRankSum=5.181;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,19,0:0.514,0.000:37:12,12,0:6,7,0:48:85,0,50,680,627,1307:255,0,255:17,0:5.0000e+01,6.5492e-05,5.2943e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,9,10:11,7,10,9 chr1 207790089 . T . PASS END=207790107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1332:0,92,255:36,0 chr1 207790108 . A . PASS END=207790112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,78,255:30,0 chr1 207790113 . C . PASS END=207790113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 207790114 . C . PASS END=207790117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr1 207790118 . C . PASS END=207790125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 207790126 . T . PASS END=207790141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 207790142 . C . PASS END=207790147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1006:0,68,255:26,0 chr1 207791416 . C . PASS END=207791433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1063:0,84,255:30,0 chr1 207791434 . A . PASS END=207791434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 207791435 . G . PASS END=207791436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 207791437 . T . PASS END=207791439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 207791440 . A . PASS END=207791592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1064:0,81,255:40,0 chr1 207793225 . A . PASS END=207793410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:88:33:0,88,1150:0,88,255:40,0 chr1 207795318 . G . PASS END=207795319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 207795320 . A G, 49.69 PASS DP=54;MQ=216.99;MQRankSum=-1.544;ReadPosRankSum=4.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,25,0:0.463,0.000:54:16,12,0:13,13,0:47:84,0,47,184,184,184:255,0,255:29,0:4.9691e+01,9.0084e-05,5.0000e+01,1.8446e+02,2.1923e+02,1.8747e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,15,14,11:13,16,11,14 chr1 207795321 . C . PASS END=207795341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,146,255:40,0 chr1 207796338 . G . PASS END=207796413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,1:105:99:92:0,120,1800:0,237,255:40,0 chr1 207803862 . C . PASS END=207803971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:43:0,81,1215:0,107,255:40,2 chr1 207803972 . T . PASS END=207803972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:72:44:0,72,1080:0,132,255:24,0 chr1 207812742 . G . PASS END=207812773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:67:0,120,1800:0,184,255:40,0 chr1 207818579 . A . PASS END=207818599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1241:0,86,255:34,0 chr1 207818600 . G . PASS END=207818600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr1 207818601 . A . PASS END=207818633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:34:0,85,1180:0,85,255:38,0 chr1 207818634 . T . PASS END=207818634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr1 207818635 . G . PASS END=207818675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1305:0,81,255:40,0 chr1 207850734 . A . PASS END=207850734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1000:0,39,255:28,0 chr1 207850735 . T . PASS END=207850735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1135:0,72,255:29,0 chr1 207850736 . C . PASS END=207850737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1149:0,55,255:30,0 chr1 207850738 . A . PASS END=207850738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 207850739 . T . PASS END=207850739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1243:0,59,255:34,0 chr1 207850740 . G . PASS END=207850741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1335:0,97,255:35,0 chr1 207850742 . A . PASS END=207850742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:34,0 chr1 207850743 . A . PASS END=207850743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1327:0,95,255:34,0 chr1 207850744 . T . PASS END=207850744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1172:0,53,255:34,0 chr1 207850745 . G . PASS END=207850756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:41:0,87,1431:0,87,255:40,0 chr1 207850757 . C . PASS END=207850757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:35:43:0,35,1404:0,35,255:39,0 chr1 207850758 . T . PASS END=207850758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1545:0,113,255:40,0 chr1 207850759 . T . PASS END=207850759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1504:0,74,255:39,0 chr1 207850760 . C . PASS END=207850768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1484:0,90,255:40,0 chr1 207850769 . A . PASS END=207850769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1410:0,57,255:39,0 chr1 207850770 . G . PASS END=207850901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:41:0,94,1530:0,94,255:40,0 chr1 207850902 . A . PASS END=207850902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:33,0 chr1 207850903 . C . PASS END=207850913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,102,255:34,0 chr1 207851543 . G . PASS END=207851573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1210:0,86,255:40,0 chr1 207851574 . G . PASS END=207851610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,118,1800:0,118,255:40,0 chr1 207851611 . A G, 49.95 PASS DP=49;MQ=155.03;MQRankSum=-3.803;ReadPosRankSum=4.344;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,27,0:0.562,0.000:48:11,15,0:10,12,0:48:85,0,49,966,743,1709:255,0,255:19,0:4.9950e+01,7.3776e-05,5.1635e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,8,19:13,8,14,13 chr1 207851612 . G . PASS END=207851642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,117,1582:0,119,255:40,0 chr1 207857217 . A . PASS END=207857302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,120,1800:0,124,255:40,0 chr1 207867698 . G . PASS END=207867702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:23,0 chr1 207867703 . A . PASS END=207867703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 207867704 . T . PASS END=207867709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:25,0 chr1 207867710 . G . PASS END=207868096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:29:0,81,1215:0,84,255:40,0 chr1 207870848 . T . PASS END=207871022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:34:0,84,1233:0,86,255:40,0 chr1 207871023 . A . PASS END=207871023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1108:0,33,255:28,0 chr1 207871024 . G . PASS END=207871024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 207871116 . T . PASS END=207871137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:40:0,98,1484:0,98,255:40,2 chr1 207871138 . G . PASS END=207871138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1523:0,66,255:40,2 chr1 207871139 . G . PASS END=207871189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:44:0,96,1584:0,96,255:40,0 chr1 207871190 . G . PASS END=207871190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1535:0,69,255:40,0 chr1 207871191 . C . PASS END=207871191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 207871192 . A . PASS END=207871218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,103,1589:0,103,255:40,0 chr1 207872534 . A . PASS END=207872619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:69:0,120,1800:0,174,255:40,0 chr1 207874864 . G . PASS END=207874963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,135,255:40,0 chr1 207881523 . G . PASS END=207881556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr1 207881557 . A G, 42.43 PASS DP=50;MQ=123.13;MQRankSum=-1.519;ReadPosRankSum=0.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,19,0:0.380,0.000:50:17,9,0:14,10,0:42:77,0,48,674,1080,1754:255,0,255:28,0:4.2434e+01,2.8631e-04,5.0550e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,10,9:14,17,12,7 chr1 207881558 . T . PASS END=207881594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,108,1620:0,114,255:40,0 chr1 207881595 . A . PASS END=207881608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1275:0,108,255:36,0 chr1 207888657 . G . PASS END=207888663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,156,255:40,0 chr1 207890809 . A . PASS END=207890809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,594:0,60,255:20,0 chr1 207890810 . A . PASS END=207890812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 207890813 . C . PASS END=207890824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 207890825 . T . PASS END=207890825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 207890826 . C . PASS END=207890828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:21,0 chr1 207890829 . C . PASS END=207890829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 207890830 . C . PASS END=207890830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 207890831 . A . PASS END=207890837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 207890838 . C . PASS END=207890838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr1 207890839 . T . PASS END=207890846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 207890847 . A . PASS END=207890847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 207890848 . G . PASS END=207890859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:24:0,68,925:0,68,255:26,0 chr1 207890860 . C . PASS END=207890861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 207890862 . C . PASS END=207890865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 207890866 . T C, 50.00 PASS DP=28;MQ=165.57;MQRankSum=-2.137;ReadPosRankSum=2.045;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:4,11,0:10,3,0:48:85,0,50,501,455,956:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,9,5:10,4,8,6 chr1 207890867 . T . PASS END=207890870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr1 207890871 . G . PASS END=207890873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 207890874 . A . PASS END=207890901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1031:0,74,255:26,0 chr1 207890902 . C . PASS END=207890903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 207890904 . T . PASS END=207890912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 207890913 . C . PASS END=207890914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 207890915 . C . PASS END=207890915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 207890916 . C . PASS END=207890918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 207890919 . G . PASS END=207890997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1148:0,83,255:33,0 chr1 207890998 . G . PASS END=207891027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,902:0,75,255:25,0 chr1 207891028 . T . PASS END=207891028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:24,0 chr1 207891029 . T . PASS END=207891036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,961:0,75,255:25,0 chr1 207896963 . G . PASS END=207897030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,148,255:40,0 chr1 207925431 . A . PASS END=207925431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 207925548 . C . PASS END=207925548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 207925552 . C . PASS END=207925552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 207925558 . A . PASS END=207925586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1002:0,80,255:33,0 chr1 207925587 . C . PASS END=207925587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1046:0,74,255:33,0 chr1 207925588 . T . PASS END=207925650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:37,0 chr1 207925651 . T . PASS END=207925654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:29:0,77,1102:0,77,255:26,0 chr1 207930358 . G . PASS END=207930521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:90:40:0,90,1417:0,90,255:40,0 chr1 207930522 . A . PASS END=207930536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1250:0,84,255:36,0 chr1 207930537 . C . PASS END=207930547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:34:0,63,945:0,89,255:23,0 chr1 207930549 . T . PASS END=207930549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 207930885 . G . PASS END=207930987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,115,1800:0,115,255:40,0 chr1 207932984 . T . PASS END=207933069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:61:0,120,1800:0,168,255:40,0 chr1 207934594 . A . PASS END=207934594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:23,0 chr1 207934595 . G . PASS END=207934595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 207934596 . G . PASS END=207934773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,944:0,84,255:40,0 chr1 207934774 . C . PASS END=207934791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,945:0,62,255:26,0 chr1 207940358 . T . PASS END=207940519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1215:0,90,255:40,0 chr1 207940520 . C . PASS END=207940525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 207940526 . C . PASS END=207940529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 207940530 . G . PASS END=207940530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 207940531 . T . PASS END=207940540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:26:0,45,675:0,61,255:16,0 chr1 207940939 . T . PASS END=207940939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 207940952 . T . PASS END=207940996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,120,1800:0,158,255:40,0 chr1 207941000 . T . PASS END=207941000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr1 207941124 . T . PASS END=207941153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:53:0,101,1636:0,101,255:40,0 chr1 207941154 . C . PASS END=207941168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:45:0,90,1350:0,118,255:40,0 chr1 207941177 . A . PASS END=207941177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr1 207943666 . G . PASS END=207943707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:73:0,120,1800:0,220,255:40,0 chr1 207956637 . G . PASS END=207956675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:87:0,120,1800:0,227,255:40,0 chr1 207958416 . A . PASS END=207958451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,155,255:40,0 chr1 207958458 . A . PASS END=207958458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 207958964 . T . PASS END=207959027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:82:0,120,1800:0,212,255:40,0 chr1 207959040 . A . PASS END=207959040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 207963598 . C . PASS END=207963649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:46:0,108,1620:0,112,255:40,0 chr1 207963680 . A . PASS END=207963680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 207966864 . G . PASS END=207966940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,141,255:40,0 chr1 207967002 . T . PASS END=207967002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 207967289 . T . PASS END=207967289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 207967339 . T . PASS END=207967340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 207967436 . T . PASS END=207967436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 207967494 . A . PASS END=207967494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,117,1755:0,153,255:39,0 chr1 207967742 . A . PASS END=207967742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 207967790 . T . PASS END=207967790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 207967921 . A . PASS END=207967921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 207967933 . C . PASS END=207967933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 207967968 . G . PASS END=207967968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 207968033 . C . PASS END=207968033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 207968087 . T . PASS END=207968087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,99,1485:0,118,255:33,0 chr1 207968094 . C . PASS END=207968094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,105,1575:0,132,255:35,0 chr1 207968240 . T . PASS END=207968240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 207968435 . C . PASS END=207968436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 207968463 . A . PASS END=207968463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr1 207968481 . A . PASS END=207968481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 207968487 . G . PASS END=207968487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 207968687 . G . PASS END=207968687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr1 207968710 . C . PASS END=207968710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 207968785 . C . PASS END=207968785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 208061083 . T . PASS END=208061268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:40:0,87,1305:0,88,255:40,0 chr1 208061449 . T . PASS END=208061463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,131,255:40,0 chr1 208062027 . C . PASS END=208062031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 208062032 . T . PASS END=208062040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 208062041 . T . PASS END=208062043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 208062044 . G . PASS END=208062045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 208062046 . C . PASS END=208062046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:28,0 chr1 208062047 . T . PASS END=208062162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:31:0,83,1168:0,83,255:40,0 chr1 208062163 . T . PASS END=208062163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:35,0 chr1 208062164 . C . PASS END=208062191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1274:0,92,255:35,0 chr1 208062506 . C . PASS END=208062544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,3:77:99:75:0,120,1800:0,182,255:40,0 chr1 208062545 . T . PASS END=208062545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,8:76:72:76:0,72,1966:0,72,255:40,0 chr1 208062546 . T . PASS END=208062558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,202,255:40,0 chr1 208062810 . C . PASS END=208062840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr1 208062841 . C . PASS END=208062844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 208062845 . G . PASS END=208062848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 208062849 . T . PASS END=208062850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 208062851 . A . PASS END=208062872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 208062873 . G . PASS END=208062898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,692:0,57,255:19,0 chr1 208062899 . G . PASS END=208062904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr1 208062905 . G . PASS END=208062935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,651:0,44,255:19,0 chr1 208062936 . G . PASS END=208062943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 208062944 . C . PASS END=208062962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 208062963 . C . PASS END=208062964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208062965 . G . PASS END=208062966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 208063060 . C . PASS END=208063066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,174,255:40,0 chr1 208063067 . G A, 49.84 PASS DP=79;MQ=249.72;MQRankSum=6.764;ReadPosRankSum=-0.560;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,37,0:0.474,0.000:78:23,17,0:18,20,0:48:85,0,50,1258,1314,2572:255,0,255:35,0:4.9844e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,14,23,14:21,20,19,18 chr1 208063068 . C . PASS END=208063099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:85:0,120,1800:0,201,255:40,0 chr1 208063100 . G . LowGQ END=208063101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,21:88:0:86:0,0,1634:255,0,255:40,27 chr1 208063102 . A . PASS END=208063102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,5:87:72:87:0,72,2921:0,72,255:40,1 chr1 208063103 . A . PASS END=208063151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:69:0,120,1800:0,124,255:40,1 chr1 208063152 . A . PASS END=208063182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:57:0,120,1800:0,139,255:40,0 chr1 208070838 . A . PASS END=208070918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:36:0,96,1430:0,101,255:40,0 chr1 208072318 . C . PASS END=208072550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:31:0,85,1154:0,85,255:40,0 chr1 208072551 . A . PASS END=208072551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:28,0 chr1 208072552 . T . PASS END=208072559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr1 208072560 . T . PASS END=208072560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,966:0,51,255:28,0 chr1 208072561 . G . PASS END=208072571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 208073166 . C . PASS END=208073166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1000:0,56,255:27,0 chr1 208073167 . T . PASS END=208073167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 208073168 . G . PASS END=208073168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 208073169 . T . PASS END=208073169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr1 208073170 . G . PASS END=208073170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 208073171 . A . PASS END=208073171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,962:0,35,255:28,0 chr1 208073172 . T . PASS END=208073172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1019:0,41,255:29,0 chr1 208073173 . G . PASS END=208073173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 208073174 . T . PASS END=208073174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,914:0,76,255:29,0 chr1 208073175 . T . PASS END=208073306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1097:0,80,255:40,0 chr1 208073307 . G . PASS END=208073318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr1 208073319 . C . PASS END=208073319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:19,0 chr1 208073320 . G . PASS END=208073324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:22,0 chr1 208073325 . T . PASS END=208073325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 208073326 . G . PASS END=208073327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 208073328 . C . PASS END=208073328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 208073329 . A . PASS END=208073331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 208073332 . A . PASS END=208073348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,713:0,47,255:18,0 chr1 208084347 . G . PASS END=208084353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr1 208084354 . A . PASS END=208084354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,653:0,58,255:24,0 chr1 208084355 . C . PASS END=208084387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,869:0,62,255:26,0 chr1 208084388 . A . PASS END=208084388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 208084389 . T . PASS END=208084402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,778:0,66,255:22,0 chr1 208084403 . C . PASS END=208084403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 208084404 . G . PASS END=208084413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:21,0 chr1 208084414 . G . PASS END=208084425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr1 208136862 . A . PASS END=208136890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr1 208136891 . G . PASS END=208136892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 208136893 . T . PASS END=208136893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 208136894 . C . PASS END=208136908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 208136909 . A . PASS END=208136909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 208136910 . G . PASS END=208136913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 208136914 . C . PASS END=208136919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 208136920 . T . PASS END=208136920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 208136921 . C . PASS END=208136922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 208136923 . C . PASS END=208136923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 208136924 . T . PASS END=208136945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 208136946 . C . PASS END=208136946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 208136947 . G . PASS END=208136951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 208136952 . C . PASS END=208136953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr1 208136954 . C . PASS END=208136955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,247:6,0 chr1 208136956 . G . PASS END=208136958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 208136959 . C . PASS END=208136959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,194:0,7,194:6,0 chr1 208136960 . G . PASS END=208136965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 208136966 . T . PASS END=208136976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 208136977 . C . PASS END=208137031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 208137032 . G . PASS END=208137032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 208137033 . T . PASS END=208137033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 208137034 . G . PASS END=208137035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 208137036 . T . PASS END=208137036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 208137037 . G . PASS END=208137038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 208137039 . T . PASS END=208137039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 208137040 . T . PASS END=208137058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr1 208137059 . C . PASS END=208137099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,551:0,40,255:18,0 chr1 208137100 . C . PASS END=208137110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,680:0,60,255:22,0 chr1 208137111 . C . PASS END=208137111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 208137112 . G . PASS END=208137112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 208137113 . C . PASS END=208137113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 208137114 . T . PASS END=208137114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:19,0 chr1 208137115 . G . PASS END=208137116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 208137117 . C . PASS END=208137118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 208137119 . G . PASS END=208137119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 208137120 . G . PASS END=208137122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr1 208137123 . G . PASS END=208137131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr1 208137132 . T . PASS END=208137132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 208137133 . C . PASS END=208137147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,870:0,62,255:26,0 chr1 208137148 . G . PASS END=208137148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208137149 . A . PASS END=208137149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,850:0,67,255:26,0 chr1 208137150 . C . PASS END=208137154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:30,0 chr1 208137155 . C . PASS END=208137155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 208137156 . A . PASS END=208137166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 208137167 . T . PASS END=208137167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:30,0 chr1 208137168 . T . PASS END=208137218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1164:0,83,255:35,0 chr1 208137219 . T . PASS END=208137219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:31,0 chr1 208137220 . G . PASS END=208137265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1089:0,85,255:35,0 chr1 208137266 . A . PASS END=208137276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,65,255:26,0 chr1 208137277 . T . PASS END=208137308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,713:0,57,255:19,0 chr1 208137871 . T . PASS END=208137999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:37:0,93,1360:0,98,255:40,0 chr1 208138973 . A . PASS END=208139008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:85:0,120,1800:0,242,255:40,0 chr1 208200588 . T . PASS END=208200591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 208200592 . C . PASS END=208200592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 208200593 . T . PASS END=208200595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,893:0,75,255:26,0 chr1 208200596 . C . PASS END=208200599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 208200600 . G . PASS END=208200607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 208200608 . C . PASS END=208200611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1045:0,84,255:28,0 chr1 208200612 . A . PASS END=208200612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr1 208200613 . A . PASS END=208200617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 208200618 . C . PASS END=208200618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 208200619 . T . PASS END=208200627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208200628 . T . PASS END=208200646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,943:0,62,255:24,0 chr1 208200647 . G . PASS END=208200647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 208200648 . C . PASS END=208200663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 208200664 . T . PASS END=208200664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 208200665 . G . PASS END=208200666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 208200667 . T . PASS END=208200667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:18,0 chr1 208200668 . C . PASS END=208200670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 208200671 . G . PASS END=208200673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 208200674 . C . PASS END=208200674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:18,0 chr1 208200675 . C . PASS END=208200683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr1 208201354 . C . PASS END=208201503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1078:0,80,255:40,0 chr1 208201504 . T . PASS END=208201504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 208202175 . C . PASS END=208202208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,738:0,63,255:23,0 chr1 208202209 . T . PASS END=208202209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 208202210 . G . PASS END=208202226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,868:0,72,255:24,0 chr1 208202227 . T . PASS END=208202227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 208202228 . G . PASS END=208202268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,65,255:26,0 chr1 208202269 . A . PASS END=208202269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 208202270 . A . PASS END=208202270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 208202271 . G . PASS END=208202279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 208202280 . A . PASS END=208202286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,740:0,63,255:22,0 chr1 208202287 . G . PASS END=208202287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:18,0 chr1 208202288 . G . PASS END=208202288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 208202289 . G . PASS END=208202291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 208202292 . A . PASS END=208202318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr1 208202319 . C . PASS END=208202364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,642:0,51,255:18,0 chr1 208202365 . T . PASS END=208202375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 208202376 . C . PASS END=208202387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr1 208204677 . T . PASS END=208204677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 208204678 . C . PASS END=208204683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 208204935 . C . PASS END=208205064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:31:0,87,1305:0,90,255:40,0 chr1 208205065 . A . PASS END=208205065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 208205066 . G . PASS END=208205066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 208205067 . G . PASS END=208205073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,971:0,63,255:26,0 chr1 208205074 . A . PASS END=208205074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,928:0,48,255:24,0 chr1 208205075 . C . PASS END=208205077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:26,0 chr1 208205078 . G . PASS END=208205081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 208205082 . T . PASS END=208205082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 208205083 . C . PASS END=208205083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208205084 . C . PASS END=208205084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 208205085 . A . PASS END=208205087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208205088 . A . PASS END=208205089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,984:0,68,255:26,0 chr1 208205090 . C . PASS END=208205091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 208205092 . T . PASS END=208205092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 208205093 . C . PASS END=208205093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208205094 . T . PASS END=208205104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,964:0,70,255:26,0 chr1 208205325 . C . PASS END=208205351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:26,0 chr1 208205352 . G . PASS END=208205357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1125:0,82,255:31,0 chr1 208205358 . A . PASS END=208205359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1178:0,63,255:30,0 chr1 208205360 . G . PASS END=208205376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:33:0,86,1225:0,86,255:36,0 chr1 208205377 . G . PASS END=208205377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:34,0 chr1 208205378 . G . PASS END=208205419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1386:0,84,255:39,0 chr1 208205420 . T . PASS END=208205420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1361:0,74,255:36,0 chr1 208205421 . G . PASS END=208205492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,84,255:40,0 chr1 208205493 . G . PASS END=208205508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:62:25:0,62,945:0,62,255:26,0 chr1 208205509 . A . PASS END=208205510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 208205511 . C . PASS END=208205519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr1 208206664 . C . PASS END=208206670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 208206671 . G . PASS END=208206775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:27:0,81,986:0,81,255:36,0 chr1 208206776 . C . PASS END=208206794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,71,255:26,0 chr1 208206795 . T . PASS END=208206795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 208206796 . G . PASS END=208206807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 208206808 . C . PASS END=208206809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 208206810 . G . PASS END=208206813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 208206814 . C . PASS END=208206814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 208206815 . C . PASS END=208206826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr1 208206827 . G . PASS END=208206843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,637:0,50,255:18,0 chr1 208206844 . G . PASS END=208206844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 208206845 . A . PASS END=208206851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 208206852 . A . PASS END=208206852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 208206853 . G . PASS END=208206854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 208207838 . C . PASS END=208207928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1209:0,86,255:40,0 chr1 208207929 . G . PASS END=208207929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 208207930 . T . PASS END=208207931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 208207932 . T . PASS END=208207937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 208211716 . C . PASS END=208211718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 208211719 . A . PASS END=208211719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr1 208211720 . T . PASS END=208211721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 208211722 . A . PASS END=208211722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:21,0 chr1 208211723 . T . PASS END=208211728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 208211729 . A . PASS END=208211729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 208211730 . G . PASS END=208211730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 208211731 . T . PASS END=208211731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:21,0 chr1 208211732 . G . PASS END=208211740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr1 208211741 . C . PASS END=208211741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr1 208211742 . G . PASS END=208211742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 208211743 . C . PASS END=208211743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 208211744 . T . PASS END=208211747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 208211748 . A . PASS END=208211748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 208211749 . G . PASS END=208211749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 208211750 . T . PASS END=208211750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 208211751 . C . PASS END=208211755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,884:0,64,255:26,0 chr1 208211756 . T . PASS END=208211760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,898:0,81,255:28,0 chr1 208211761 . C . PASS END=208211762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 208211763 . T . PASS END=208211764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 208211765 . G . PASS END=208211765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 208211766 . T . PASS END=208211770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 208211771 . A . PASS END=208211787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:26,0 chr1 208211788 . C . PASS END=208211788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 208211789 . A . PASS END=208211791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 208211792 . A . PASS END=208211793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 208211794 . C . PASS END=208211816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,760:0,63,255:22,0 chr1 208211817 . A . PASS END=208211817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr1 208211818 . C . PASS END=208211819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 208212170 . C . PASS END=208212319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:36:0,81,1215:0,84,255:40,0 chr1 208212320 . A . PASS END=208212329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,105,255:26,0 chr1 208212966 . C . PASS END=208213003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1227:0,88,255:38,0 chr1 208213004 . C . PASS END=208213004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 208213005 . C . PASS END=208213077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:39:0,83,1651:0,83,255:40,0 chr1 208213078 . C . PASS END=208213079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:75:45:0,75,1125:0,135,255:25,0 chr1 208213080 . G . PASS END=208213081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:47:0,81,1215:0,141,255:27,0 chr1 208213082 . A . PASS END=208213087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:44:0,78,1170:0,116,255:26,0 chr1 208213088 . T . PASS END=208213110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:26,0 chr1 208213111 . T . PASS END=208213112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 208213337 . C . PASS END=208213403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,111,1665:0,117,255:40,0 chr1 208215443 . C . PASS END=208215453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 208215454 . C . PASS END=208215455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 208215456 . G . PASS END=208215501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,757:0,72,255:26,0 chr1 208215502 . G . PASS END=208215502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 208215503 . A . PASS END=208215503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,812:0,64,255:26,0 chr1 208215504 . G . PASS END=208215507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 208215508 . C . PASS END=208215510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1053:0,71,255:27,0 chr1 208215511 . C . PASS END=208215512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 208215513 . T . PASS END=208215522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr1 208215523 . A . PASS END=208215523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:24,0 chr1 208215524 . G . PASS END=208215524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 208215525 . T . PASS END=208215532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1058:0,87,255:30,0 chr1 208215533 . T . PASS END=208215541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,80,255:26,0 chr1 208215542 . C . PASS END=208215551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 208215552 . C . PASS END=208215553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 208215554 . G . PASS END=208215554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 208215555 . T . PASS END=208215555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 208215556 . C . PASS END=208215557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 208215558 . T . PASS END=208215558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 208215559 . G . PASS END=208215560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 208215561 . T . PASS END=208215561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 208215562 . G . PASS END=208215562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 208215563 . A . PASS END=208215563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr1 208215564 . G . PASS END=208215564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208215565 . C . PASS END=208215590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,71,255:26,0 chr1 208215591 . T . PASS END=208215591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:21,0 chr1 208215592 . G . PASS END=208215593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 208215594 . A . PASS END=208215594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 208215595 . G . PASS END=208215599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 208215600 . T . PASS END=208215600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 208215601 . G . PASS END=208215604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 208215605 . T . PASS END=208215605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 208215606 . G . PASS END=208215615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:23,0 chr1 208215616 . G . PASS END=208215616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr1 208215617 . G . PASS END=208215618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 208215619 . G . PASS END=208215619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:18,0 chr1 208215620 . C . PASS END=208215620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 208215621 . G . PASS END=208215622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 208215623 . A . PASS END=208215630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 208215631 . C . PASS END=208215631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 208215632 . A . PASS END=208215642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,808:0,63,255:23,0 chr1 208215643 . C . PASS END=208215643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 208215644 . T . PASS END=208215649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 208215650 . T . PASS END=208215660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 208215661 . G . PASS END=208215661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 208215662 . G . PASS END=208215664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 208215665 . A . PASS END=208215665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 208215666 . A . PASS END=208215672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:18,0 chr1 208215673 . C . PASS END=208215673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr1 208215674 . A . PASS END=208215680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:16,0 chr1 208215681 . T . PASS END=208215681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:14,0 chr1 208215682 . C . PASS END=208215695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:16,0 chr1 208215696 . G . PASS END=208215696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 208215697 . C . PASS END=208215711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 208216406 . C . PASS END=208216505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,81,255:40,0 chr1 208216506 . T . PASS END=208216519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 208216520 . A . PASS END=208216524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 208216525 . T . PASS END=208216525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:23,0 chr1 208216526 . A . PASS END=208216545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:25,0 chr1 208216546 . A . PASS END=208216546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:22,0 chr1 208216547 . A . PASS END=208216548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 208217853 . C . PASS END=208217875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:18,0 chr1 208217876 . C . PASS END=208217876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 208217877 . G . PASS END=208217879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 208217880 . A . PASS END=208217884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 208217885 . A . PASS END=208217889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 208217890 . G . PASS END=208217895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 208217896 . C . PASS END=208217896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:21,0 chr1 208217897 . T . PASS END=208217899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 208217900 . A . PASS END=208217900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 208217901 . T . PASS END=208217909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 208217910 . G . PASS END=208217910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 208217911 . C . PASS END=208217920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 208217921 . A . PASS END=208217921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 208217922 . G . PASS END=208217929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 208217930 . T . PASS END=208217936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:28,0 chr1 208217937 . A . PASS END=208217959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 208217960 . A . PASS END=208217960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 208217961 . C . PASS END=208217968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr1 208217969 . A . PASS END=208217976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 208217977 . G . PASS END=208217978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 208217979 . G . PASS END=208217983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208217984 . A . PASS END=208217984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:26,0 chr1 208217985 . G . PASS END=208217985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208217986 . G . PASS END=208217986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:26,0 chr1 208217987 . C . PASS END=208217993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 208217994 . C . PASS END=208218001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 208218002 . A . PASS END=208218010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208218011 . A . PASS END=208218016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 208218017 . G . PASS END=208218018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208218019 . C . PASS END=208218049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:25,0 chr1 208218050 . A . PASS END=208218050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 208218051 . C . PASS END=208218067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 208218068 . A . PASS END=208218087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,673:0,41,255:19,0 chr1 208218412 . C . PASS END=208218555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:34:0,87,1225:0,89,255:40,0 chr1 208219223 . C . PASS END=208219382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:31:0,80,1139:0,80,255:40,0 chr1 208219383 . G . PASS END=208219384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1125:0,93,255:25,0 chr1 208219385 . G . PASS END=208219392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:28,0 chr1 208219393 . C . PASS END=208219429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,906:0,62,255:26,0 chr1 208219430 . G . PASS END=208219430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208219431 . G . PASS END=208219445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,1022:0,68,255:24,0 chr1 208219446 . T . PASS END=208219447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:23,0 chr1 208219448 . C . PASS END=208219451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 208219452 . A . PASS END=208219452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 208219453 . C . PASS END=208219462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 208224354 . A . PASS END=208224447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:48:0,98,1800:0,98,255:40,0 chr1 208224601 . C . PASS END=208224766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:36:0,92,1266:0,92,255:40,0 chr1 208224767 . T . PASS END=208224767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1217:0,61,255:29,0 chr1 208224768 . C . PASS END=208224768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 208225672 . C . PASS END=208225688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,992:0,68,255:26,0 chr1 208225689 . C . PASS END=208225689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:25,0 chr1 208225690 . T . PASS END=208225690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 208225691 . G . PASS END=208225691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 208225692 . G . PASS END=208225701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,950:0,81,255:35,0 chr1 208225702 . T . PASS END=208225702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 208225703 . A . PASS END=208225707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1207:0,89,255:38,0 chr1 208225708 . G . PASS END=208225709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1252:0,75,255:37,0 chr1 208225710 . C . PASS END=208225721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1380:0,98,255:40,0 chr1 208225722 . A . PASS END=208225722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1441:0,68,255:37,0 chr1 208225723 . G . PASS END=208225779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1295:0,84,255:40,0 chr1 208225780 . A . PASS END=208225780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1180:0,64,255:31,0 chr1 208225781 . T . PASS END=208225802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:32:0,80,1153:0,80,255:35,0 chr1 208225803 . A . PASS END=208225803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 208225804 . G . PASS END=208225807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 208225808 . T . PASS END=208225808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,885:0,64,255:26,0 chr1 208227766 . C . PASS END=208227771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,899:0,64,255:26,0 chr1 208227772 . G . PASS END=208227790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1057:0,84,255:29,0 chr1 208227791 . T . PASS END=208227791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:28,0 chr1 208227792 . T . PASS END=208227800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:30,0 chr1 208227801 . A . PASS END=208227801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr1 208227802 . C . PASS END=208227820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr1 208227821 . A . PASS END=208227821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr1 208227822 . T . PASS END=208227833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1155:0,80,255:27,0 chr1 208227834 . C . PASS END=208227856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:26,0 chr1 208227857 . A . PASS END=208227878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,642:0,54,255:18,0 chr1 208227879 . C . PASS END=208227883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 208234031 . T . PASS END=208234063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,584:0,48,255:19,0 chr1 208234064 . G . PASS END=208234082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 208234083 . C . PASS END=208234101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 208234102 . C . PASS END=208234103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 208234104 . C . PASS END=208234108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 208234109 . A . PASS END=208234111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 208234112 . T . PASS END=208234124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,859:0,81,255:27,0 chr1 208234125 . T . PASS END=208234150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr1 208234151 . C . PASS END=208234161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr1 208234162 . C . PASS END=208234182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,413:0,36,255:12,0 chr1 208252605 . C . PASS END=208252611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 208252612 . A . PASS END=208252612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:20,0 chr1 208252613 . T . PASS END=208252615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 208252616 . G . PASS END=208252616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 208252617 . A . PASS END=208252629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 208252630 . T . PASS END=208252630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr1 208252631 . T . PASS END=208252636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 208252637 . T . PASS END=208252637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 208252638 . G . PASS END=208252643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 208252644 . G . PASS END=208252644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 208252645 . G . PASS END=208252645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 208252646 . A . PASS END=208252646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 208252647 . C . PASS END=208252671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,870:0,64,255:24,0 chr1 208252672 . C . LowGQ END=208252672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:0:26:0,0,767:16,0,255:19,0 chr1 208252673 . T . PASS END=208252681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:22,0 chr1 208252682 . G . PASS END=208252683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:21,0 chr1 208252684 . T . PASS END=208252684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr1 208252685 . G . PASS END=208252685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 208252686 . G . PASS END=208252689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr1 208252690 . A . PASS END=208252704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,52,255:19,0 chr1 208252705 . T . PASS END=208252705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 208252706 . C . PASS END=208252708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 208252709 . C . PASS END=208252729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,413:0,36,255:13,0 chr1 208252730 . A . PASS END=208252730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 208252731 . C . PASS END=208252737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 208252738 . T . PASS END=208252771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 208252772 . G . PASS END=208252779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 208252780 . C . PASS END=208252794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:7:0,21,263:0,21,255:8,0 chr1 208252795 . A . PASS END=208252795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 208255757 . C . PASS END=208255839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,110,1482:0,110,255:40,0 chr1 208255840 . C . PASS END=208255853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1395:0,117,255:38,0 chr1 208257725 . C . PASS END=208257750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,676:0,44,255:19,0 chr1 208257751 . A . PASS END=208257766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:26,0 chr1 208257767 . A . PASS END=208257771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 208257772 . G . PASS END=208257772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 208257773 . G . PASS END=208257798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1139:0,90,255:31,1 chr1 208257799 . T . PASS END=208257799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 208257800 . G . PASS END=208257805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 208257806 . A . PASS END=208257850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,872:0,65,255:26,0 chr1 208257851 . C . PASS END=208257851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 208257852 . G . PASS END=208257909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,937:0,62,255:26,0 chr1 208257910 . C . PASS END=208257925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:18,0 chr1 208266131 . C . PASS END=208266245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1055:0,84,255:40,0 chr1 208269374 . A . PASS END=208269464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:39:0,97,1554:0,97,255:40,0 chr1 208269465 . A . PASS END=208269465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:34,0 chr1 208269466 . C . PASS END=208269469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,102,1530:0,105,255:35,0 chr1 208269470 . T . PASS END=208269470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1122:0,74,255:33,0 chr1 208270075 . C . PASS END=208270086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 208270087 . G . PASS END=208270100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:24,0 chr1 208270101 . T . PASS END=208270192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1102:0,83,255:34,0 chr1 208270193 . A . PASS END=208270193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 208270194 . G . PASS END=208270195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 208270196 . T . PASS END=208270208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:25,0 chr1 208270209 . T . PASS END=208270225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:19:0,41,659:0,41,255:19,0 chr1 208270226 . A . PASS END=208270228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 208272191 . C . PASS END=208272295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:89:37:0,89,1341:0,89,255:40,0 chr1 208272296 . T . PASS END=208272296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1083:0,52,255:31,0 chr1 208272297 . T . PASS END=208272310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 208272311 . G . PASS END=208272314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 208276492 . A . PASS END=208276495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 208276496 . T . PASS END=208276496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 208276497 . G . PASS END=208276535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1033:0,84,255:36,0 chr1 208276536 . C . PASS END=208276536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr1 208276537 . A . PASS END=208276579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1225:0,86,255:36,0 chr1 208276580 . G . PASS END=208276592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr1 208315674 . C . PASS END=208315676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 208315677 . T . PASS END=208315677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 208315678 . C . PASS END=208315688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:23,0 chr1 208315689 . G . PASS END=208315689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 208315690 . A . PASS END=208315694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr1 208315695 . C . PASS END=208315695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 208315696 . A . PASS END=208315708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1047:0,81,255:30,0 chr1 208315709 . C . PASS END=208315709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 208315710 . A . PASS END=208315710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 208315711 . A . PASS END=208315711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 208315712 . T . PASS END=208315760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1103:0,80,255:31,0 chr1 208315761 . G . PASS END=208315762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 208315763 . C . PASS END=208315767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 208315768 . T . PASS END=208315808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,754:0,63,255:25,0 chr1 208383625 . C . PASS END=208383663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,878:0,69,255:26,0 chr1 208383664 . G . PASS END=208383750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:34,0 chr1 208383751 . G . PASS END=208383751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:28,0 chr1 208383752 . C . PASS END=208383762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 208383763 . C . PASS END=208383763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 208383764 . T . PASS END=208383766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 208383767 . T . PASS END=208383767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,932:0,59,255:27,0 chr1 208383768 . T . PASS END=208383782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 208383783 . A . PASS END=208383783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 208383784 . G . PASS END=208383784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 208383785 . A . PASS END=208383792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,964:0,70,255:26,0 chr1 208383793 . A . PASS END=208383793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr1 208383794 . T . PASS END=208383802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 208383803 . A . PASS END=208383807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:51:25:0,51,765:0,58,255:20,0 chr1 208390080 . C . PASS END=208390085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:32,0 chr1 208390086 . G C, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=2.298;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,18,0:0.562,0.000:32:5,10,0:9,8,0:48:85,0,49,636,501,1136:255,0,255:14,0:5.0000e+01,7.1446e-05,5.1910e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,15,3:4,10,9,9 chr1 208390087 . G . PASS END=208390123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:33,0 chr1 208390124 . C . PASS END=208390150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:33:0,87,1257:0,87,255:37,0 chr1 208390151 . A . PASS END=208390151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:33,0 chr1 208390152 . C . PASS END=208390161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1311:0,92,255:36,0 chr1 208390162 . T . PASS END=208390162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:59:36:0,59,1230:0,59,255:32,0 chr1 208390163 . C . PASS END=208390165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 208390166 . T . PASS END=208390166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1257:0,56,255:34,0 chr1 208390167 . G . PASS END=208390264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:33:0,93,1395:0,98,255:38,0 chr1 208390265 . G . PASS END=208390265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:28,0 chr1 208390266 . T . PASS END=208390268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 208390269 . A . PASS END=208390278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 208390279 . C . PASS END=208390343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,83,255:32,0 chr1 208390344 . G . PASS END=208390364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 208390365 . G . PASS END=208390366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 208390367 . T . PASS END=208390370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 208390371 . G . PASS END=208390372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208390373 . C . PASS END=208390389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 208390390 . T . PASS END=208390424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:35,0 chr1 208390425 . C . PASS END=208390425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr1 208390426 . A . PASS END=208390835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:29:0,80,1133:0,80,255:40,0 chr1 208390836 . G . PASS END=208390846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 208390847 . G . PASS END=208390847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr1 208390848 . C . PASS END=208390850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 208390851 . C . PASS END=208390851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208390852 . A . PASS END=208390852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 208390853 . G . PASS END=208390854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 208390855 . T . PASS END=208390863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:24,0 chr1 208390864 . C . PASS END=208390874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:23:0,45,675:0,62,255:18,0 chr1 208390875 . G . PASS END=208390875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:14,0 chr1 208390876 . C . PASS END=208390876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 208390877 . T . PASS END=208390877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 208390878 . C . PASS END=208390911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:15:0,41,543:0,41,255:19,0 chr1 208390912 . A . PASS END=208390915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 208390916 . T . PASS END=208390916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 208390917 . G . PASS END=208390923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr1 208390924 . T . PASS END=208390924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 208390925 . T . PASS END=208390931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:24,0 chr1 208390932 . A . PASS END=208390932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 208390933 . T . PASS END=208390954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,65,255:23,0 chr1 208390955 . C . PASS END=208390955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 208390956 . G . PASS END=208390958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 208390959 . G . PASS END=208390959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 208390960 . C . PASS END=208390960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 208390961 . A . PASS END=208390961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr1 208390962 . G . PASS END=208390989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:26,0 chr1 208390990 . G . PASS END=208390995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 208390996 . T . PASS END=208390996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 208390997 . T . PASS END=208391014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1055:0,83,255:33,0 chr1 208391015 . T . PASS END=208391015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr1 208391016 . C . PASS END=208391040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1201:0,86,255:34,0 chr1 208391041 . T . PASS END=208391044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 208391045 . C . PASS END=208391047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 208391048 . T . PASS END=208391048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 208391049 . C . PASS END=208391050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 208391051 . G . PASS END=208391059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 208391060 . C . PASS END=208391065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1053:0,87,255:32,0 chr1 208391066 . T . PASS END=208391066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1084:0,49,255:30,0 chr1 208391067 . G . PASS END=208391070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:32,0 chr1 208391071 . G . PASS END=208391071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:29,0 chr1 208391072 . C . PASS END=208391096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:32,0 chr1 208391097 . T . PASS END=208391098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:25,0 chr1 208391099 . G . PASS END=208391110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 208391111 . A . PASS END=208391112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,954:0,70,255:26,0 chr1 208391113 . T . PASS END=208391115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 208391116 . T . PASS END=208391116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,901:0,21,255:27,0 chr1 208391117 . T . PASS END=208391126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:32,0 chr1 208391127 . G . PASS END=208391127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 208391128 . T . PASS END=208391134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:32,0 chr1 208391135 . T . PASS END=208391135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:30,0 chr1 208391136 . C . PASS END=208391146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1111:0,82,255:31,0 chr1 208391147 . A . PASS END=208391148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 208391149 . G . PASS END=208391184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1109:0,85,255:31,0 chr1 208391185 . A . PASS END=208391185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 208391186 . G . PASS END=208391192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1156:0,93,255:31,0 chr1 208391193 . C . PASS END=208391194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 208391195 . A . PASS END=208391216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1213:0,91,255:33,0 chr1 208391217 . A . PASS END=208391253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1141:0,83,255:32,0 chr1 208391254 . C T, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.771;ReadPosRankSum=3.519;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,20,0:0.606,0.000:33:7,11,0:6,9,0:47:85,0,47,686,465,1151:255,0,255:12,0:5.0000e+01,8.7754e-05,4.9909e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,8,12:8,5,15,5 chr1 208391255 . G . PASS END=208391291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:33:0,87,1305:0,99,255:40,0 chr1 208391292 . A . PASS END=208391303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1412:0,101,255:38,0 chr1 208391304 . T . PASS END=208391306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 208391307 . G . PASS END=208391312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1255:0,89,255:34,0 chr1 209602643 . A . PASS END=209602753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:37:0,84,1260:0,95,255:40,0 chr1 209603770 . A . PASS END=209603821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:31:0,82,1157:0,82,255:40,0 chr1 209605549 . A . PASS END=209605549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 209605550 . T . PASS END=209605551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 209605552 . T . PASS END=209605552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 209605553 . C . PASS END=209605571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:17,0 chr1 209605572 . A . PASS END=209605572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr1 209605573 . G . PASS END=209605574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 209605575 . C . PASS END=209605575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 209605576 . A . PASS END=209605589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 209605590 . C . PASS END=209605630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr1 209605631 . C . PASS END=209605635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:20:0,30,450:0,43,255:12,0 chr1 209605636 . TAGCAGCAGCAGC T,TAGCAGCAGC, 46.78 PASS DP=20;MQ=249.85;MQRankSum=3.183;ReadPosRankSum=0.405;FractionInformativeReads=0.750;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,5,2,0:0.333,0.133,0.000:15:3,4,1,0:5,1,1,0:46:51,0,50,121,154,171,135,173,259,273:151,0,255:8,11:4.6776e+01,1.1286e-04,5.3000e+01,1.2092e+02,1.5825e+02,1.7392e+02,1.6549e+02,2.0749e+02,2.9349e+02,3.0629e+02:0.00,4.00,7.00,4.00,8.00,7.00,34.77,38.77,38.77,37.77:1,7,3,4:4,4,3,4 chr1 209605637 . A . LowGQ END=209605649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,8:19:0:17:0,0,5:143,0,255:15,11 chr1 209605650 . G . PASS END=209605658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 209605659 . G . PASS END=209605660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,565:0,32,255:14,0 chr1 209605661 . A . PASS END=209605661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 209605662 . G . PASS END=209605662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 209605663 . C . PASS END=209605663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 209605664 . A . PASS END=209605664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,488:0,14,255:14,0 chr1 209605665 . G . PASS END=209605668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 209605669 . C . PASS END=209605669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 209605670 . A . PASS END=209605679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 209605680 . G . PASS END=209605680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 209605681 . T . PASS END=209605683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 209768329 . A . PASS END=209768420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,120,1800:0,125,255:40,0 chr1 209773328 . A . PASS END=209773350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:25,0 chr1 209773351 . T . PASS END=209773351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 209773352 . G . PASS END=209773353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 209773354 . T . PASS END=209773354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 209773355 . G . PASS END=209773356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 209773357 . A . PASS END=209773426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1136:0,90,255:35,0 chr1 209773427 . C . PASS END=209773427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 209773428 . C . PASS END=209773437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 209773438 . A . PASS END=209773438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 209773439 . G . PASS END=209773443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 209773444 . C . PASS END=209773444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 209773445 . T . PASS END=209773446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 209773447 . T . PASS END=209773456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,70,255:26,0 chr1 209776559 . G . PASS END=209776633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:63:0,120,1800:0,159,255:40,0 chr1 209778881 . T . PASS END=209778885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 209778886 . C . PASS END=209778890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 209778891 . G . PASS END=209778891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 209778892 . G . PASS END=209778893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 209778894 . G . PASS END=209778895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 209778896 . G . PASS END=209778910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1094:0,80,255:35,0 chr1 209778911 . C . PASS END=209778911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:34,0 chr1 209778912 . C . PASS END=209778913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1280:0,92,255:35,0 chr1 209778914 . G . PASS END=209778914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:34,0 chr1 209778915 . G . PASS END=209778973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:36:0,93,1263:0,93,255:40,0 chr1 209778974 . A . PASS END=209778974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr1 209778975 . G . PASS END=209778986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1247:0,86,255:34,0 chr1 209778987 . C . PASS END=209778987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:30,0 chr1 209778988 . A . PASS END=209778993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1123:0,80,255:32,0 chr1 209778994 . A . PASS END=209778994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1025:0,63,255:28,0 chr1 209778995 . T . PASS END=209779009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1177:0,80,255:30,0 chr1 209779010 . A . PASS END=209779017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,943:0,65,255:24,0 chr1 209779018 . A . PASS END=209779018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,812:0,31,255:20,0 chr1 209779019 . G . PASS END=209779019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 209779665 . C . PASS END=209779689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,109,1746:0,109,255:40,0 chr1 209779690 . C . PASS END=209779784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:37:0,84,1260:0,110,255:40,0 chr1 209779785 . G . PASS END=209779788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:33:0,75,1125:0,99,255:26,0 chr1 209781203 . C . PASS END=209781203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 209781204 . T . PASS END=209781205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 209781206 . C . PASS END=209781208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 209781209 . A . PASS END=209781211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr1 209781212 . T . PASS END=209781212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr1 209781213 . G . PASS END=209781213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 209781214 . C . PASS END=209781216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 209781217 . G . PASS END=209781217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 209781218 . C . PASS END=209781219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 209781220 . C . PASS END=209781221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:29,0 chr1 209781222 . G . PASS END=209781225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 209781226 . C . PASS END=209781226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 209781227 . C . PASS END=209781248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1135:0,80,255:31,0 chr1 209781249 . C . PASS END=209781257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1078:0,74,255:26,0 chr1 209781258 . C . PASS END=209781258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:24,0 chr1 209781259 . G . PASS END=209781259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 209781260 . G . PASS END=209781263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 209781264 . C . PASS END=209781264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 209781265 . A . PASS END=209781267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 209781268 . A . PASS END=209781278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:27,0 chr1 209782325 . G . PASS END=209782342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,122,255:40,0 chr1 209782343 . A G, 49.57 PASS DP=56;MQ=249.50;MQRankSum=6.399;ReadPosRankSum=0.912;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,26,0:0.464,0.000:56:13,12,0:17,14,0:48:84,0,50,914,1065,1979:255,0,255:31,0:4.9567e+01,6.9634e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,10,15,11:15,15,15,11 chr1 209782344 . T . PASS END=209782380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,128,255:40,0 chr1 209782381 . T . PASS END=209782437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:40:0,96,1440:0,108,255:40,0 chr1 209783196 . C . PASS END=209783274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:37:0,96,1440:0,111,255:40,0 chr1 209784810 . G . PASS END=209784897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:46:0,106,1591:0,106,255:40,0 chr1 209785137 . C . PASS END=209785143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:24,0 chr1 209785144 . T . PASS END=209785144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 209785145 . C . PASS END=209785150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 209785151 . A . PASS END=209785152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:22,0 chr1 209785153 . C . PASS END=209785153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 209785154 . A . PASS END=209785154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,815:0,23,255:22,0 chr1 209785155 . G . PASS END=209785156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:27:0,45,939:0,45,255:26,0 chr1 209785157 . T . PASS END=209785346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:27:0,80,1016:0,80,255:40,0 chr1 209785347 . C . PASS END=209785347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr1 209785348 . A . PASS END=209785414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1115:0,86,255:36,0 chr1 209785415 . C . PASS END=209785415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:30,0 chr1 209785416 . A . PASS END=209785451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1131:0,80,255:32,0 chr1 209785452 . C . PASS END=209785455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:23,0 chr1 209785456 . C . PASS END=209785456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,939:0,10,255:21,0 chr1 209785457 . C . PASS END=209785507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:26,0 chr1 209785508 . A . PASS END=209785508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 209785509 . A . PASS END=209785512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 209785513 . C . PASS END=209785515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 209785516 . C . PASS END=209785518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 209785519 . A . PASS END=209785522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 209785523 . C . PASS END=209785525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 209785526 . T . PASS END=209785536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:18,0 chr1 209785537 . T . PASS END=209785537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:14,0 chr1 209785538 . C . PASS END=209785542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 209785543 . A . PASS END=209785558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,480:0,39,255:13,0 chr1 209785559 . A . PASS END=209785559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 209785560 . C . PASS END=209785561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 209786130 . G . PASS END=209786140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:12,0 chr1 209786141 . C . PASS END=209786141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 209786142 . G . PASS END=209786144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 209786145 . G . PASS END=209786145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 209786146 . G . PASS END=209786146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 209786147 . T . PASS END=209786148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 209786149 . A . PASS END=209786149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,304:0,6,255:11,0 chr1 209786150 . T . PASS END=209786151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 209786152 . G . PASS END=209786153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 209786154 . A . PASS END=209786154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 209786155 . C . PASS END=209786157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 209786158 . G . PASS END=209786160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 209786161 . A . PASS END=209786161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 209786162 . A . PASS END=209786171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:17,0 chr1 209786172 . C . PASS END=209786172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 209786173 . A . PASS END=209786184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr1 209786185 . C . PASS END=209786185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 209786186 . G . PASS END=209786198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 209786199 . T . PASS END=209786199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 209786200 . G . PASS END=209786209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr1 209786210 . T . PASS END=209786217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,565:0,32,255:13,0 chr1 209786218 . T . PASS END=209786218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 209786219 . G . PASS END=209786220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 209788224 . G . PASS END=209788224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 209788337 . C . PASS END=209788337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:44:0,96,1440:0,132,255:32,0 chr1 209788341 . G . PASS END=209788341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr1 209788392 . C . PASS END=209788392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 209788484 . C . PASS END=209788484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr1 209788492 . G . PASS END=209788492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr1 209788616 . T . PASS END=209788736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1260:0,102,255:40,0 chr1 209788737 . A . PASS END=209788742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:23,0 chr1 209788743 . A . PASS END=209788752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:23:0,57,855:0,69,255:19,0 chr1 209788753 . C . PASS END=209788753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 209789808 . T . PASS END=209789808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 209789816 . C . PASS END=209789970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:37:0,101,1370:0,101,255:40,0 chr1 209790754 . C . PASS END=209790762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 209790763 . C . PASS END=209790763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 209790764 . A . PASS END=209790769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 209790770 . T . PASS END=209790770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:22,0 chr1 209790771 . G . PASS END=209790771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 209790772 . C . PASS END=209790773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,756:0,55,255:24,0 chr1 209790774 . T . PASS END=209790779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr1 209790780 . C . PASS END=209790785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 209790786 . C . PASS END=209790786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 209790787 . C . PASS END=209790787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 209790788 . T . PASS END=209790801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:30,0 chr1 209790802 . G . PASS END=209790802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr1 209790803 . G . PASS END=209790823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:35:0,95,1335:0,95,255:37,0 chr1 209790824 . C . PASS END=209790824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 209790825 . T . PASS END=209790858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:37:0,90,1350:0,98,255:38,0 chr1 209790859 . G . PASS END=209790860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:29,0 chr1 209790861 . G . PASS END=209790932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1250:0,89,255:39,0 chr1 209791243 . A . PASS END=209791243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 209791252 . C . PASS END=209791387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1055:0,84,255:40,0 chr1 209791388 . C . PASS END=209791388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr1 209791389 . G . PASS END=209791393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 209791797 . C . PASS END=209791798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 209791799 . G . PASS END=209791799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 209791800 . G . PASS END=209791802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 209791803 . T . PASS END=209791803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 209791804 . C . PASS END=209791861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:27,0 chr1 209791862 . C . PASS END=209791862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 209791863 . A . PASS END=209791863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 209791864 . C . PASS END=209791870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,979:0,87,255:30,0 chr1 209791871 . C . PASS END=209791871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 209791872 . A . PASS END=209791884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1091:0,96,255:34,0 chr1 209791885 . T . PASS END=209791885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr1 209791886 . G . PASS END=209791925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1256:0,102,255:37,0 chr1 209791926 . G . PASS END=209791926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:31,0 chr1 209791927 . T . PASS END=209791961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr1 209791962 . G . PASS END=209791963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 209791964 . C . PASS END=209791968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 209791969 . T . PASS END=209791972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1035:0,83,255:25,0 chr1 209791973 . C . PASS END=209791976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,86,255:20,0 chr1 209791977 . T . PASS END=209791986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:42:29:0,42,630:0,86,255:18,0 chr1 209791987 . C . PASS END=209791992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:30:27:0,30,450:0,81,255:13,0 chr1 209791993 . C . PASS END=209791993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:24:27:0,24,360:0,81,255:8,0 chr1 209791994 . A . PASS END=209792002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:12:24:0,12,180:0,72,255:6,0 chr1 209792003 . G . PASS END=209792004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:6:21:0,6,90:0,63,255:2,0 chr1 209795878 . C . PASS END=209795878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 209795880 . C . PASS END=209795894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:19,0 chr1 209795895 . C . PASS END=209795944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:24,0 chr1 209795945 . G . PASS END=209795945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 209795946 . G . PASS END=209795948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 209795949 . C . PASS END=209795949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 209795950 . G . PASS END=209795956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,961:0,75,255:25,0 chr1 209795957 . G . PASS END=209795957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:21,0 chr1 209795958 . C . PASS END=209795985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 209795986 . T . PASS END=209796019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr1 209796020 . C . PASS END=209796020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:15,0 chr1 209796021 . C . PASS END=209796025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 209796326 . C . PASS END=209796334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 209796335 . T . PASS END=209796335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 209796336 . G . PASS END=209796337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 209796338 . T . PASS END=209796338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 209796339 . C . PASS END=209796343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 209796344 . G . PASS END=209796344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 209796345 . G . PASS END=209796375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 209796376 . G . PASS END=209796393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr1 209796394 . A . PASS END=209796394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 209796395 . A . PASS END=209796455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,560:0,41,255:19,0 chr1 209796456 . G . PASS END=209796456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 209796457 . T . PASS END=209796457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr1 209796458 . C . PASS END=209796460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 209796461 . G . PASS END=209796496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,612:0,45,255:19,0 chr1 209796497 . A . PASS END=209796521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr1 209796522 . G . PASS END=209796524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:8,0 chr1 209796527 . G . PASS END=209796527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 209796848 . A . PASS END=209796848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 209796850 . C . PASS END=209796851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,737:0,57,255:19,0 chr1 209796852 . T . PASS END=209796852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:17,0 chr1 209796853 . G . PASS END=209796887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:25,0 chr1 209796888 . T . PASS END=209796891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 209796892 . C . PASS END=209796908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:25,0 chr1 209796909 . G . PASS END=209796912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 209796913 . G . PASS END=209796913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 209796914 . G . PASS END=209796926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1108:0,87,255:32,0 chr1 209796927 . C . PASS END=209796927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr1 209796928 . T . PASS END=209796943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr1 209796944 . T . PASS END=209796944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:29,0 chr1 209796945 . G . PASS END=209796974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1133:0,82,255:31,0 chr1 209796975 . T . PASS END=209796984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 209796985 . C . PASS END=209796985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:22,0 chr1 209796986 . T . PASS END=209796996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr1 209796997 . G . PASS END=209796997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 209796998 . C . PASS END=209797012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 209797013 . A . PASS END=209797013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr1 209797014 . C . PASS END=209797025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 209797026 . C . PASS END=209797056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 209797057 . C . PASS END=209797062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 209797063 . G . PASS END=209797063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 209797064 . A . PASS END=209797064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 209797065 . A . PASS END=209797070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:11,0 chr1 209797185 . C . PASS END=209797190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 209797191 . G . PASS END=209797232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,747:0,62,255:26,0 chr1 209797233 . G . PASS END=209797235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 209797236 . A . PASS END=209797236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 209797237 . C . PASS END=209797303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:30:0,85,1126:0,85,255:35,0 chr1 209797304 . T . PASS END=209797304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 209797305 . C . PASS END=209797306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 209797307 . T . PASS END=209797307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 209797308 . C . PASS END=209797315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 209797316 . A . PASS END=209797326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,70,255:26,0 chr1 209797327 . C . PASS END=209797346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,55,255:19,0 chr1 209798993 . C . PASS END=209798999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 209799000 . A . PASS END=209799005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 209799006 . T . PASS END=209799006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 209799007 . G . PASS END=209799007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 209799008 . G . PASS END=209799008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,437:0,14,255:14,0 chr1 209799009 . C . PASS END=209799012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 209799013 . G . PASS END=209799013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 209799014 . G . PASS END=209799035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr1 209799036 . C . PASS END=209799036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 209799037 . T . PASS END=209799047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 209799048 . G . PASS END=209799051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 209799052 . G . PASS END=209799124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,477:0,42,255:17,0 chr1 209799125 . A . PASS END=209799130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 209799131 . G . PASS END=209799131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr1 209799132 . G . PASS END=209799141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:10,0 chr1 209799142 . C . PASS END=209799142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 209799143 . A . PASS END=209799183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr1 209799184 . C . PASS END=209799185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 209799186 . G . PASS END=209799186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 209799187 . C . PASS END=209799205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr1 209799206 . T . PASS END=209799206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 209799207 . A . PASS END=209799215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 209799216 . A . PASS END=209799222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 209799223 . G . PASS END=209799224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 209799225 . G . PASS END=209799252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 209799253 . A G, 12.87 PASS DP=10;MQ=250.00;MQRankSum=1.733;ReadPosRankSum=1.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,2,0:0.200,0.000:10:4,0,0:4,2,0:13:47,0,50,71,286,358:47,0,255:8,0:1.2872e+01,2.3020e-01,5.3230e+01,7.1720e+01,3.2106e+02,3.6078e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,1,1:5,3,1,1 chr1 209799254 . C . PASS END=209799259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 209799260 . C . PASS END=209799283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 209799284 . G . PASS END=209799290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 209799291 . T . PASS END=209799360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 209799361 . A . PASS END=209799369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 209799370 . G . PASS END=209799371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 209800211 . C . PASS END=209800304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1194:0,83,255:38,0 chr1 209800305 . A . PASS END=209800313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:27,0 chr1 209800314 . G . PASS END=209800323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:52:23:0,52,768:0,52,255:19,0 chr1 209800324 . C . PASS END=209800324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 209800728 . C . PASS END=209800728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 209800729 . T . PASS END=209800732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 209800733 . T . PASS END=209800733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 209800734 . G . PASS END=209800735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 209800736 . A . PASS END=209800736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 209800737 . C . PASS END=209800737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 209800738 . T . PASS END=209800746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:23,0 chr1 209800747 . A . PASS END=209800747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 209800748 . G . PASS END=209800748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 209800749 . G . PASS END=209800751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,930:0,72,255:26,0 chr1 209800752 . G . PASS END=209800775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1155:0,80,255:31,0 chr1 209800776 . T . PASS END=209800776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:28,0 chr1 209800777 . T . PASS END=209800806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1302:0,92,255:34,0 chr1 209800807 . T . PASS END=209800807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:33,0 chr1 209800808 . G . PASS END=209800809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 209800810 . T . PASS END=209800810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:33,2 chr1 209800811 . A . PASS END=209800811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1312:0,48,255:32,2 chr1 209800812 . G . PASS END=209800812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:33,0 chr1 209800813 . G . PASS END=209800855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1327:0,95,255:36,0 chr1 209800856 . A . PASS END=209800856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1288:0,67,255:31,0 chr1 209800857 . A . PASS END=209800887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1271:0,89,255:35,0 chr1 209800888 . A . PASS END=209800888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1178:0,63,255:29,0 chr1 209800889 . T . PASS END=209800890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr1 209800891 . T . PASS END=209800891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:26,0 chr1 209800892 . C . PASS END=209800894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 209800895 . T . PASS END=209800912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,64,255:26,0 chr1 209800913 . T . PASS END=209800924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:18,0 chr1 209801365 . A . PASS END=209801365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 209801379 . C . PASS END=209801388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1124:0,87,255:29,0 chr1 209801389 . C . PASS END=209801396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1163:0,90,255:30,0 chr1 209801397 . T . PASS END=209801397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr1 209801398 . T . PASS END=209801501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1155:0,83,255:40,0 chr1 209801502 . C . PASS END=209801502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 209801503 . C . PASS END=209801505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 209801506 . G . PASS END=209801506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr1 209801507 . C . PASS END=209801507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 209801508 . A . PASS END=209801531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:24,0 chr1 209801532 . C . PASS END=209801535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:17,0 chr1 209803077 . C . PASS END=209803077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 209803082 . A . PASS END=209803161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,1125:0,90,255:40,0 chr1 209803162 . T . PASS END=209803198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,143,255:40,0 chr1 209803199 . A G, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.019;ReadPosRankSum=4.354;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,30,0:0.588,0.000:51:10,16,0:11,14,0:47:85,0,47,1032,702,1734:255,0,255:18,0:5.0000e+01,8.4648e-05,5.0240e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,12,18:14,7,14,16 chr1 209803200 . T . PASS END=209803236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,125,255:40,0 chr1 209803237 . T . PASS END=209803251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:41:0,84,1260:0,109,255:39,0 chr1 209803252 . T . PASS END=209803270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr1 209803958 . A . PASS END=209803958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 209803959 . C . PASS END=209803959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 209803960 . T . PASS END=209803960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 209803961 . T . PASS END=209803969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 209803970 . A . PASS END=209803975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 209803976 . G . PASS END=209804057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1156:0,83,255:40,0 chr1 209804058 . T . PASS END=209804081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1227:0,89,255:35,0 chr1 209805925 . T . PASS END=209805925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 209805928 . C . PASS END=209805934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 209805935 . G . PASS END=209805961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,760:0,63,255:26,0 chr1 209805962 . G . PASS END=209805968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 209805969 . G . PASS END=209805980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 209805981 . C . PASS END=209805983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 209805984 . C . PASS END=209805984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr1 209805985 . A . PASS END=209806016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1133:0,90,255:32,0 chr1 209806017 . G . PASS END=209806017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr1 209806018 . G . PASS END=209806061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1133:0,83,255:32,0 chr1 209806062 . T . PASS END=209806062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:27,0 chr1 209806063 . T . PASS END=209806063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 209806064 . T . PASS END=209806102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,825:0,68,255:24,0 chr1 209806103 . T . PASS END=209806103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:20,0 chr1 209806104 . T . PASS END=209806109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 209806110 . T . PASS END=209806110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr1 209806111 . C . PASS END=209806116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 209806117 . C . PASS END=209806122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 209806414 . C . PASS END=209806481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,125,255:40,0 chr1 209807792 . C . PASS END=209807801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr1 209807802 . T . PASS END=209807802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 209807803 . T . PASS END=209807809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,354:0,36,255:12,0 chr1 209807810 . T . PASS END=209807810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 209807811 . G . PASS END=209807811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 209807812 . C . PASS END=209807848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,476:0,42,255:18,0 chr1 209807849 . C . PASS END=209807849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 209807850 . T . PASS END=209807864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,675:0,44,255:17,0 chr1 209807865 . C . PASS END=209807865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:15,0 chr1 209807866 . G . PASS END=209807885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,582:0,41,255:17,0 chr1 209807886 . A . PASS END=209807886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 209807887 . A . PASS END=209807897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 209807898 . C . PASS END=209807898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 209807899 . A . PASS END=209807903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 209807904 . G . PASS END=209807904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 209807905 . C . PASS END=209807911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 209807912 . G . PASS END=209807913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 209807914 . A . PASS END=209807916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 209807917 . G . PASS END=209807917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 209807918 . G . PASS END=209807923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 209807924 . T . PASS END=209807925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr1 209807926 . G . PASS END=209807926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 209807927 . C . PASS END=209807927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:14,0 chr1 209807928 . C . PASS END=209807929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 209807930 . G . PASS END=209807930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 209807931 . G . PASS END=209807932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 209807933 . C . PASS END=209807934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 209807935 . T . PASS END=209807935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 209807936 . A . PASS END=209807936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 209807937 . C . PASS END=209807951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 209807952 . C . PASS END=209807960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,535:0,31,255:13,0 chr1 209807961 . A . PASS END=209807961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr1 209807962 . G . PASS END=209807962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 209807963 . C . PASS END=209807963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 209807964 . A . PASS END=209807964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 209807965 . T . PASS END=209807971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 209807972 . G A, 50.00 PASS DP=14;MQ=250.00;MQRankSum=2.491;ReadPosRankSum=0.623;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,11,0:0.786,0.000:14:0,4,0:3,7,0:42:85,0,39,393,107,501:255,0,74:3,0:5.0000e+01,2.9071e-04,4.2448e+01,3.9348e+02,1.4205e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,1,4,7:1,2,9,2 chr1 209807973 . G . PASS END=209807983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 209807985 . T . PASS END=209807985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 209807998 . G . PASS END=209807998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 209811251 . A . PASS END=209811326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:90:40:0,90,1426:0,90,255:40,0 chr1 209811877 . A . PASS END=209811877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 209811879 . C . PASS END=209811879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:26,0 chr1 209811880 . A . PASS END=209811885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1216:0,83,255:31,0 chr1 209811886 . T G, 140.30 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,16,0:0,15,0:90:178,93,0,1198,93,1198:255,99,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,13:0,0,17,14 chr1 209811887 . G . PASS END=209811923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:33:0,83,1224:0,83,255:40,0 chr1 209811924 . C . PASS END=209811993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1305:0,96,255:40,0 chr1 209823307 . A . PASS END=209823307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 209823309 . C . PASS END=209823321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,941:0,66,255:26,0 chr1 209823322 . G . PASS END=209823322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 209823323 . T . PASS END=209823323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 209823324 . G . PASS END=209823448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:28:0,80,1055:0,80,255:40,0 chr1 209823449 . G . PASS END=209823463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 209823465 . T . PASS END=209823465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 209824262 . C . PASS END=209824289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,129,255:40,0 chr1 209825700 . G . PASS END=209825700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 209825729 . G . PASS END=209825729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 209825748 . G . PASS END=209825748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 209825786 . C . PASS END=209825786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 209849030 . A . PASS END=209849039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1225:0,86,255:35,0 chr1 209849040 . T . PASS END=209849151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:32:0,81,1213:0,81,255:40,0 chr1 209849152 . C . PASS END=209849153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 209849154 . T . PASS END=209849154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:25,0 chr1 209849155 . G . PASS END=209849155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 209849156 . A . PASS END=209849160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 209849161 . G . PASS END=209849174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:30,0 chr1 209849175 . C . PASS END=209849175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 209849176 . C . PASS END=209849183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 209849184 . C . PASS END=209849184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 209849185 . C . PASS END=209849186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 209849187 . C . PASS END=209849187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 209849188 . C . PASS END=209849188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 209849189 . A . PASS END=209849192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 209849193 . G . PASS END=209849193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:25,0 chr1 209849194 . T . PASS END=209849194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 209849195 . C . PASS END=209849197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 209849198 . C . PASS END=209849198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:26,0 chr1 209849199 . G . PASS END=209849202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 209849203 . C . PASS END=209849255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,937:0,62,255:26,0 chr1 209849256 . A . PASS END=209849256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,906:0,26,255:22,0 chr1 209849257 . G . PASS END=209849264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 209849265 . C . PASS END=209849282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr1 209849283 . A . PASS END=209849284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 209849285 . C . PASS END=209849287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 209849288 . C . PASS END=209849316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 209849317 . G . PASS END=209849341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,639:0,40,255:19,0 chr1 209858453 . A G, 169.94 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,22,0:0,19,0:120:208,123,0,1561,123,1561:255,123,0:0,0:1.6994e+02,1.1994e+02,0.0000e+00,4.5000e+02,1.5471e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,17:0,0,21,20 chr1 209870916 . A T, 268.79 PASS DP=74;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,74,0:1.000,0.000:74:0,41,0:0,33,0:219:307,222,0,2795,222,2795:255,223,0:0,0:2.6879e+02,2.1879e+02,0.0000e+00,4.5000e+02,2.5356e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,39:0,0,30,44 chr1 209875254 . A G, 197.02 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,23,0:0,27,0:147:235,150,0,1909,150,1909:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,20:0,0,25,25 chr1 209878288 . A . PASS END=209878347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1135:0,80,255:33,0 chr1 209878348 . T . PASS END=209878348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 209878349 . A . PASS END=209878350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 209878351 . T . PASS END=209878351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 209878352 . C . PASS END=209878353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 209878354 . G . PASS END=209878357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1055:0,60,255:30,0 chr1 209878358 . A . PASS END=209878367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 209878368 . C . PASS END=209878375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1016:0,71,255:25,0 chr1 209879156 . A . PASS END=209879157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 209879158 . A . PASS END=209879158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,992:0,60,255:28,0 chr1 209879159 . T . PASS END=209879162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 209879163 . C . PASS END=209879163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 209879164 . C . PASS END=209879198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1070:0,90,255:33,0 chr1 209879199 . A . PASS END=209879199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,1058:0,54,255:31,0 chr1 209879200 . G . PASS END=209879245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:34:0,86,1175:0,86,255:38,0 chr1 209879246 . A . PASS END=209879246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:28,0 chr1 209879247 . T . PASS END=209879259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr1 209879260 . G . PASS END=209879267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1031:0,71,255:26,0 chr1 209879268 . A . PASS END=209879268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 209879269 . A . PASS END=209879286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 209880054 . G . PASS END=209880165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:92:39:0,92,1410:0,92,255:40,0 chr1 209880288 . G . PASS END=209880465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1213:0,89,255:40,0 chr1 209880466 . T . PASS END=209880473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1196:0,85,255:33,0 chr1 209905781 . G . PASS END=209905919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1215:0,87,255:40,0 chr1 209905920 . C . PASS END=209905924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:22,0 chr1 209907649 . A . PASS END=209907651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 209907652 . C . PASS END=209907667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,939:0,64,255:26,0 chr1 209907668 . T . PASS END=209907670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 209907671 . T . PASS END=209907671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 209907672 . G . PASS END=209907673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 209907674 . G . PASS END=209907674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 209907675 . A . PASS END=209907738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:30:0,90,1080:0,90,255:40,0 chr1 209907739 . T . PASS END=209907739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1396:0,79,255:39,0 chr1 209907740 . G . PASS END=209907866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:40:0,92,1552:0,92,255:40,0 chr1 209933385 . A . PASS END=209933385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 209933386 . T . PASS END=209933386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 209933387 . G . PASS END=209933389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,217:0,21,217:7,0 chr1 209933390 . C . PASS END=209933390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 209933391 . A . LowGQ END=209933391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:18,0,204:6,0 chr1 209933392 . G . PASS END=209933400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 209933401 . C . PASS END=209933401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 209933402 . C . PASS END=209933409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 209933410 . C . PASS END=209933413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 209933414 . T . PASS END=209933414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 209933415 . G . PASS END=209933417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 209933418 . T . PASS END=209933418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 209933419 . T . PASS END=209933428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 209933429 . G . PASS END=209933429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 209933430 . G . PASS END=209933450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,456:0,40,255:19,0 chr1 209933451 . T . PASS END=209933451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 209933452 . G . PASS END=209933465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 209933466 . G . PASS END=209933466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 209933467 . A . PASS END=209933473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:53:18:0,53,526:0,53,255:18,0 chr1 209933474 . T . PASS END=209933474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 209933475 . G . PASS END=209933476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr1 209933477 . A . PASS END=209933477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 209933478 . A . PASS END=209933479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 209933480 . C . PASS END=209933480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:16,0 chr1 209933481 . C . PASS END=209933489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 209933490 . C . PASS END=209933500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 209933501 . G . PASS END=209933501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 209933502 . A . PASS END=209933505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 209933506 . C . PASS END=209933506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 209933507 . T . PASS END=209933513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr1 209933514 . C . PASS END=209933514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 209933515 . A . PASS END=209933522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr1 209933523 . A . PASS END=209933523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 209933524 . A . PASS END=209933536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,831:0,69,255:25,0 chr1 209933537 . C . PASS END=209933542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr1 209933543 . G . PASS END=209933549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 209933550 . C . PASS END=209933564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:19:0,46,698:0,46,255:19,0 chr1 209933565 . C . PASS END=209933567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 209933568 . C . PASS END=209933579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:20,0 chr1 209933580 . T . PASS END=209933583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 209933584 . G . PASS END=209933606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 209933607 . G . PASS END=209933613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,618:0,60,255:22,0 chr1 209933614 . G . PASS END=209933614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr1 209933615 . C . PASS END=209933616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:22,0 chr1 209933617 . A . PASS END=209933617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 209933618 . A . PASS END=209933619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,764:0,69,255:23,0 chr1 209933620 . C . PASS END=209933620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 209933621 . G . PASS END=209933621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 209933622 . C . PASS END=209933622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 209933623 . A . PASS END=209933625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 209933626 . A . PASS END=209933626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 209933627 . T . PASS END=209933634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 209933635 . C . PASS END=209933635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 209933636 . C . PASS END=209933638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 209933639 . G . PASS END=209933640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,837:0,56,255:21,0 chr1 209933641 . A . PASS END=209933668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 209933669 . G . PASS END=209933729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,585:0,40,255:19,0 chr1 209935860 . G . PASS END=209936007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:46:0,120,1800:0,121,255:40,0 chr1 209936158 . G . PASS END=209936215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:85:0,120,1800:0,220,255:40,0 chr1 209936413 . T . PASS END=209936437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:94:0,120,1800:0,255,255:40,0 chr1 209936708 . G . PASS END=209936737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,150,255:40,0 chr1 209936837 . G . PASS END=209936879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1093:0,80,255:33,0 chr1 209936880 . T . PASS END=209936880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 209936881 . T . PASS END=209936885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 209936886 . A . PASS END=209936905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,68,255:25,0 chr1 209936906 . A . PASS END=209936906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 209936907 . T . PASS END=209936921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 209936922 . G . PASS END=209936922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 209936923 . C . PASS END=209936923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 209936924 . T . PASS END=209936924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr1 209936925 . C . PASS END=209936932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:20,0 chr1 209946293 . G . PASS END=209946364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,101,1527:0,101,255:40,0 chr1 209948694 . A . PASS END=209948694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1195:0,99,255:33,0 chr1 209948695 . A . PASS END=209948695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 209948696 . A . PASS END=209948704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1189:0,102,255:38,0 chr1 209948705 . T . PASS END=209948705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1289:0,75,255:37,0 chr1 209948706 . T . PASS END=209948834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:38:0,84,1305:0,84,255:40,0 chr1 209948919 . C . PASS END=209948933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1313:0,108,255:37,0 chr1 209948944 . C . PASS END=209949015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:39:0,83,1426:0,83,255:40,0 chr1 209949016 . A . PASS END=209949016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1568:0,61,255:37,0 chr1 209949017 . G . PASS END=209949078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:41:0,89,1216:0,89,255:40,0 chr1 209949079 . C . PASS END=209949079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1402:0,76,255:37,0 chr1 209949080 . A . PASS END=209949469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:86:36:0,86,1398:0,86,255:40,0 chr1 209950697 . G . PASS END=209950759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:39:0,90,1435:0,90,255:40,0 chr1 209950760 . C G, 206.51 PASS DP=53;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,31,0:0,22,0:157:244,160,0,2047,160,2047:255,160,0:0,0:2.0651e+02,1.5651e+02,0.0000e+00,4.5000e+02,1.9128e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,25:0,0,24,29 chr1 209950761 . A . PASS END=209950797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,127,255:40,0 chr1 209950798 . A . PASS END=209950827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,86,255:40,0 chr1 209950828 . A . PASS END=209950832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,102,255:26,0 chr1 209951456 . A . PASS END=209951518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,125,255:40,0 chr1 209952660 . G . PASS END=209952748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:62:0,120,1800:0,170,255:40,0 chr1 209952776 . A . PASS END=209952798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:105:0,120,1800:0,255,255:40,0 chr1 209953815 . A . PASS END=209953835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:19,0 chr1 209953836 . G . PASS END=209953851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 209953852 . T . PASS END=209953857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr1 209953858 . A . PASS END=209953885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 209953886 . A . PASS END=209953886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 209953887 . A . PASS END=209953889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 209953890 . A . PASS END=209953930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,637:0,40,255:19,0 chr1 209953931 . C . PASS END=209953931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 209953932 . T . PASS END=209953940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:16,0 chr1 209953941 . A . PASS END=209953942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:14,0 chr1 209953943 . G . PASS END=209953945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 209953946 . A . PASS END=209953951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 209954690 . T . PASS END=209954695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 209954696 . G . PASS END=209954696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:30,0 chr1 209954697 . A . PASS END=209954800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1105:0,92,255:38,0 chr1 209954801 . A . PASS END=209954803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 209955401 . A . PASS END=209955457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1147:0,90,255:38,0 chr1 209955458 . G . PASS END=209955467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:32:0,75,1125:0,83,255:26,0 chr1 209955468 . C . PASS END=209955479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:29,0 chr1 209955480 . A . PASS END=209955493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:25:0,71,1047:0,71,255:25,0 chr1 209956170 . T . PASS END=209956180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:23,0 chr1 209956181 . C . PASS END=209956182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:30:23:0,30,714:0,30,255:22,0 chr1 209956183 . G . PASS END=209956183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 209956184 . C . PASS END=209956184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 209956185 . C . PASS END=209956188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 209956189 . A . PASS END=209956189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 209956190 . G . PASS END=209956193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,898:0,62,255:26,0 chr1 209956194 . G . PASS END=209956205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:28:0,83,1009:0,83,255:33,0 chr1 209956206 . G . PASS END=209956206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:31,0 chr1 209956207 . G . PASS END=209956623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:34:0,87,1255:0,87,255:40,0 chr1 209956624 . C . PASS END=209956624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:38,0 chr1 209956625 . T . PASS END=209956793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:34:0,90,1296:0,90,255:40,0 chr1 209956794 . C . PASS END=209956794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:30,0 chr1 209956795 . C . PASS END=209956817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 209956818 . C . PASS END=209956831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr1 209956832 . G . PASS END=209956840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 209956841 . C . PASS END=209956847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 209956848 . C . PASS END=209956850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 209956851 . C . PASS END=209956851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr1 209956852 . A . PASS END=209956856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 209956857 . T . PASS END=209956858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:31,0 chr1 209956859 . C . PASS END=209956859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:19:32:0,19,1063:0,19,255:30,0 chr1 209956860 . A . PASS END=209956860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 209956861 . G . PASS END=209956912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1101:0,80,255:37,0 chr1 209956913 . G . PASS END=209956913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 209956914 . G . PASS END=209956932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 209956933 . A . PASS END=209956933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr1 209956934 . C . PASS END=209956943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 209956944 . A . PASS END=209956947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 209956948 . C . PASS END=209956948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,892:0,34,255:24,0 chr1 209956949 . T . PASS END=209956973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,884:0,61,255:25,0 chr1 209956974 . C . PASS END=209956979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 209958970 . C . PASS END=209958970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 209959107 . T . PASS END=209959107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 209959421 . G . PASS END=209959421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 209959497 . G . PASS END=209959497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1519:0,120,255:40,0 chr1 209959701 . C . PASS END=209959701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 209959759 . A . PASS END=209959759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 209959763 . T . PASS END=209959763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 209959766 . A . PASS END=209959766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 209959895 . C . PASS END=209959895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 209959921 . C . PASS END=209959921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 209959998 . C . PASS END=209959998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 209960053 . A . PASS END=209960053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 209960065 . C . PASS END=209960065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 209960180 . G . PASS END=209960180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 209960291 . G . PASS END=209960292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 209960593 . A . PASS END=209960593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 209960642 . A . PASS END=209960642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 209960833 . T . PASS END=209960833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 209960960 . C . PASS END=209960960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:12,0 chr1 209960961 . G . PASS END=209960961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 209961174 . A . PASS END=209961174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 209961190 . A . PASS END=209961190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 209961250 . C . PASS END=209961250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 209961288 . C . PASS END=209961288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 209961545 . T . PASS END=209961545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:39,0 chr1 209961765 . T . PASS END=209961767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr1 209961768 . C . PASS END=209961775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,919:0,81,255:28,0 chr1 209961776 . G . PASS END=209961776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 209961777 . C . PASS END=209961777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 209961778 . A . PASS END=209961778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,947:0,35,255:26,0 chr1 209961779 . G . PASS END=209961789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 209961790 . A . PASS END=209961790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:25,0 chr1 209961791 . G . PASS END=209961791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 209961792 . T . PASS END=209961792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:25,0 chr1 209961793 . T . PASS END=209961796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1215:0,85,255:27,0 chr1 209961797 . T . PASS END=209961799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,942:0,60,255:27,0 chr1 209961800 . T . PASS END=209961805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:28,0 chr1 209961806 . T . PASS END=209961806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr1 209961807 . G . PASS END=209961807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:27,0 chr1 209961808 . G . PASS END=209961989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:31:0,83,1224:0,83,255:40,0 chr1 209963012 . C . PASS END=209963130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,142,255:40,0 chr1 209963839 . C . PASS END=209963847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr1 209963848 . A . PASS END=209963850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 209963851 . G . PASS END=209963855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 209963856 . C . PASS END=209963856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 209963857 . A . PASS END=209963913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,776:0,62,255:26,0 chr1 209963914 . G . PASS END=209963914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 209963915 . G . PASS END=209963939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,878:0,65,255:26,0 chr1 209963940 . C . PASS END=209963940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 209963941 . T . PASS END=209963944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 209963945 . A . PASS END=209963947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 209963948 . G . PASS END=209963951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 209963952 . C . PASS END=209963953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 209963954 . G . PASS END=209963956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:22,0 chr1 209963957 . T . PASS END=209963957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 209963958 . G . PASS END=209963968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,787:0,72,255:24,0 chr1 209963969 . T . PASS END=209963969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 209963970 . G . PASS END=209963971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,899:0,75,255:25,0 chr1 209963972 . C . PASS END=209963972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 209963973 . A . PASS END=209963976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 209963977 . C . PASS END=209963977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 209963978 . C . PASS END=209963991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,969:0,75,255:25,0 chr1 209963992 . A . PASS END=209963992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 209963993 . T . PASS END=209964004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 209964005 . C . PASS END=209964005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 209964006 . C . PASS END=209964049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,886:0,66,255:25,0 chr1 209964050 . T . PASS END=209964050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 209964051 . G . PASS END=209964057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 209964058 . T . PASS END=209964058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 209964059 . G . PASS END=209964075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:22,0 chr1 209964076 . T . PASS END=209964076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 209964077 . T . PASS END=209964079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 209964080 . C . PASS END=209964087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 209964088 . A . PASS END=209964089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 209964090 . G . PASS END=209964090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 209964091 . C . PASS END=209964093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:22,0 chr1 209964094 . A . PASS END=209964110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:19:0,51,765:0,53,255:21,0 chr1 209964111 . C . PASS END=209964113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 209964114 . C . PASS END=209964116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 209964117 . G . PASS END=209964119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 209964120 . A . PASS END=209964120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 209964121 . G . PASS END=209964128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:24,0 chr1 209964129 . A . PASS END=209964129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 209964130 . C . PASS END=209964140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,886:0,75,255:26,0 chr1 209964141 . A . PASS END=209964141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 209964142 . T . PASS END=209964149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,931:0,75,255:25,0 chr1 209964150 . T . PASS END=209964150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,836:0,20,255:23,0 chr1 209964151 . C . PASS END=209964151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 209964152 . G . PASS END=209964153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 209964154 . C . PASS END=209964155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 209964156 . G . PASS END=209964156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:21,0 chr1 209964157 . C . PASS END=209964164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,992:0,65,255:24,0 chr1 209964165 . G . PASS END=209964165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 209964166 . T . PASS END=209964172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 209964173 . C . PASS END=209964173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 209964174 . G . PASS END=209964192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,914:0,62,255:25,0 chr1 209964193 . T . PASS END=209964193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 209964194 . C . PASS END=209964201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 209964202 . C . PASS END=209964233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,623:0,54,255:19,0 chr1 209964237 . A . PASS END=209964237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 209964240 . G . PASS END=209964240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 209965614 . T . PASS END=209965616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,976:0,78,255:26,0 chr1 209965617 . G . PASS END=209965624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,965:0,84,255:29,0 chr1 209965625 . C . PASS END=209965768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:30:0,80,1127:0,80,255:40,0 chr1 209965769 . G . PASS END=209965772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 209966497 . T . PASS END=209966503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:43:0,91,1491:0,91,255:40,0 chr1 209966504 . T . PASS END=209966504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:68:43:0,68,1482:0,68,255:40,0 chr1 209966505 . T . PASS END=209966528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:43:0,90,1503:0,90,255:40,0 chr1 209968622 . C . PASS END=209968622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 209968635 . C . PASS END=209968636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 209968637 . T . PASS END=209968637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr1 209968638 . T . PASS END=209968644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1066:0,80,255:32,0 chr1 209968645 . C . PASS END=209968683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:33:0,96,1225:0,97,255:40,0 chr1 209968684 . C A, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=1.662;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,25,0:0.581,0.000:43:12,14,0:6,11,0:47:85,0,48,829,607,1436:255,0,255:19,0:5.0000e+01,7.8953e-05,5.0866e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,12,13:11,7,11,14 chr1 209968685 . G . PASS END=209968691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1489:0,102,255:40,0 chr1 209968692 . C . PASS END=209968692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:54:46:0,54,1127:0,54,255:40,0 chr1 209968693 . C . LowGQ END=209968693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,14:46:0:46:0,0,801:123,0,255:32,0 chr1 209968694 . A . PASS END=209968695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr1 209968696 . C . PASS END=209968696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:57:47:0,57,1204:0,57,255:40,0 chr1 209968697 . T . PASS END=209968697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 209968698 . C . PASS END=209968698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:60:48:0,60,1210:0,60,255:40,0 chr1 209968699 . A . PASS END=209968703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:93:47:0,93,1329:0,93,255:40,0 chr1 209968704 . C . PASS END=209968704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1349:0,77,255:40,0 chr1 209968705 . C . PASS END=209968732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:82:46:0,82,1428:0,82,255:40,0 chr1 209968733 . T . PASS END=209968763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:34:0,82,1305:0,82,255:40,0 chr1 209969693 . C . PASS END=209969694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 209969695 . G . PASS END=209969708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,778:0,63,255:22,0 chr1 209969709 . G . PASS END=209969709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 209969710 . C . PASS END=209969716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:24,0 chr1 209969717 . G . PASS END=209969717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 209969718 . C . PASS END=209969737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,68,255:25,0 chr1 209969738 . G . PASS END=209969740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 209969741 . A . PASS END=209969742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 209969743 . A . PASS END=209969758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:29,0 chr1 209969759 . T . PASS END=209969759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 209969760 . G . PASS END=209969762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:29,0 chr1 209969763 . C . PASS END=209969767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 209969768 . C . PASS END=209969770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 209969771 . T . PASS END=209969773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:26,0 chr1 209969774 . T . PASS END=209969774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 209969775 . G . PASS END=209969778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 209969779 . T . PASS END=209969795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 209969796 . T . PASS END=209969796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:28,0 chr1 209969797 . T . PASS END=209969831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1139:0,80,255:39,0 chr1 209969832 . C . PASS END=209969832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:36,0 chr1 209969833 . T . PASS END=209969864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:39:0,96,1520:0,96,255:40,0 chr1 209969865 . T . PASS END=209969897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1418:0,101,255:39,0 chr1 209974582 . T . PASS END=209974582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 209974585 . C . PASS END=209974585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 209974586 . T . PASS END=209974586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 209974587 . T . PASS END=209974596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:18,0 chr1 209974597 . A . LowGQ END=209974597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,465:10,0,255:15,0 chr1 209974598 . T . PASS END=209974599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 209974600 . T . PASS END=209974600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,735:0,60,255:20,0 chr1 209974601 . T . PASS END=209974615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 209974616 . G . PASS END=209974618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 209974619 . C . PASS END=209974619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 209974620 . T . PASS END=209974649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,884:0,69,255:25,0 chr1 209974650 . G . PASS END=209974650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 209974651 . G . PASS END=209974669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,915:0,75,255:25,0 chr1 209974670 . T . PASS END=209974670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:24,0 chr1 209974671 . G . PASS END=209974700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 209974701 . T . PASS END=209974701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 209974702 . A . PASS END=209974705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 209974706 . A . PASS END=209974706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:18,0 chr1 209974707 . C . PASS END=209974712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:22,0 chr1 209974713 . C . PASS END=209974713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 209974714 . C . PASS END=209974720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr1 209974721 . C . PASS END=209974721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 209974722 . A . PASS END=209974725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 209974726 . C . PASS END=209974726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 209974727 . T . PASS END=209974727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 209974728 . T . PASS END=209974728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 209974729 . T . PASS END=209974730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 209974731 . G . PASS END=209974731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 209974732 . C . PASS END=209974733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 209974734 . G . PASS END=209974734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 209974735 . G . PASS END=209974736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 209974737 . C . PASS END=209974747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:16,0 chr1 209974748 . T . PASS END=209974748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:13,0 chr1 209974749 . G . PASS END=209974750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 209974751 . A . PASS END=209974753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:14:0,31,527:0,31,255:13,0 chr1 209974754 . G . PASS END=209974754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 209974755 . C . PASS END=209974757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 209974758 . T . PASS END=209974758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 209974772 . C . PASS END=209974772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 209975403 . G . PASS END=209975403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 209979314 . A . PASS END=209979314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 209979506 . G . PASS END=209979506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1451:0,107,255:38,0 chr1 209979515 . G . PASS END=209979515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1467:0,107,255:35,0 chr1 210001409 . A . PASS END=210001505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,102,1520:0,102,255:40,0 chr1 210001506 . T . PASS END=210001512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:40:0,99,1485:0,107,255:34,0 chr1 210001513 . C . PASS END=210001515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:26,0 chr1 210003453 . G . PASS END=210003492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:84:0,120,1800:0,205,255:40,0 chr1 210004148 . T . PASS END=210004148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 210004149 . C . PASS END=210004149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 210004150 . A . PASS END=210004150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 210004151 . G . PASS END=210004161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1260:0,87,255:39,0 chr1 210004162 . T . PASS END=210004198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,105,1332:0,105,255:40,0 chr1 210004199 . C G, 212.53 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,23,0:0,32,0:163:250,166,0,2125,166,2125:255,166,0:0,0:2.1253e+02,1.6253e+02,0.0000e+00,4.5000e+02,1.9730e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,39,16:0,0,27,28 chr1 210004200 . A . PASS END=210004236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:55:0,120,1800:0,145,255:40,0 chr1 210004237 . A . PASS END=210004388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,149,255:40,0 chr1 210006530 . A . PASS END=210006534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:19,0 chr1 210006535 . G . PASS END=210006552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,739:0,60,255:26,0 chr1 210006553 . G . PASS END=210006564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:29,0 chr1 210006565 . G . PASS END=210006565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:29,0 chr1 210006566 . A . PASS END=210006567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1148:0,96,255:32,0 chr1 210006568 . G . PASS END=210006568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr1 210006569 . G . PASS END=210006569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 210006570 . G . PASS END=210006570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:32,0 chr1 210006571 . G . PASS END=210006602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1156:0,86,255:40,0 chr1 210006603 . C T, 185.43 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,28,0:0,18,0:135:223,138,0,323,323,323:255,138,0:0,0:1.8543e+02,1.3543e+02,0.0000e+00,3.2020e+02,3.5497e+02,3.2321e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,23,23:0,0,27,19 chr1 210006604 . G . PASS END=210006640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,105,1611:0,105,255:40,0 chr1 210006641 . G . PASS END=210006702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:40:0,81,1382:0,81,255:40,0 chr1 210006703 . G . PASS END=210006703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 210008420 . A . PASS END=210008508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:83:0,120,1800:0,234,255:40,0 chr1 210010146 . T . PASS END=210010547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:80:34:0,80,1440:0,80,255:40,0 chr1 210010548 . A . PASS END=210010556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:37:0,69,1035:0,111,255:26,0 chr1 210012150 . A . PASS END=210012152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr1 210012153 . G . PASS END=210012216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1111:0,90,255:36,0 chr1 210012217 . T . PASS END=210012217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1170:0,75,255:32,0 chr1 210012218 . C . PASS END=210012242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:35,0 chr1 210012243 . T . PASS END=210012243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:30,0 chr1 210012244 . G . PASS END=210012473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:32:0,84,1223:0,86,255:40,0 chr1 210014198 . G . PASS END=210014205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 210014206 . A . PASS END=210014206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 210014207 . T . PASS END=210014223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 210014224 . C . PASS END=210014224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,914:0,26,255:23,0 chr1 210014225 . G . PASS END=210014232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:26,0 chr1 210014233 . G . PASS END=210014252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1086:0,84,255:31,0 chr1 210014253 . T . PASS END=210014253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 210014254 . A . PASS END=210014257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 210014258 . T . PASS END=210014258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:30,0 chr1 210014259 . C . PASS END=210014291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1350:0,81,255:39,0 chr1 210014292 . T . PASS END=210014292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1410:0,76,255:35,0 chr1 210014293 . G . PASS END=210014400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:33:0,87,1182:0,87,255:40,0 chr1 210015610 . C . PASS END=210015610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:16,0 chr1 210015611 . A . PASS END=210015612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 210015613 . T . PASS END=210015616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:18,0 chr1 210015617 . T . PASS END=210015618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,692:0,57,255:19,0 chr1 210015619 . A . PASS END=210015619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 210015620 . A . PASS END=210015620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 210015621 . T . PASS END=210015622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 210015623 . A . PASS END=210015623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 210015624 . C . PASS END=210015624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 210015625 . A . PASS END=210015625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 210015626 . T . PASS END=210015628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:23,0 chr1 210015629 . A . PASS END=210015629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr1 210015630 . C . PASS END=210015636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,812:0,75,255:26,0 chr1 210015637 . C . PASS END=210015637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 210015638 . C . PASS END=210015638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,947:0,13,255:28,0 chr1 210015639 . C . PASS END=210015650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:33:0,86,1205:0,86,255:36,0 chr1 210015651 . T . PASS END=210015651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1162:0,61,255:32,0 chr1 210015652 . G . PASS END=210015828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:38:0,108,1490:0,110,255:40,0 chr1 210015928 . G . PASS END=210016040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:39:0,93,1395:0,98,255:40,0 chr1 210016796 . G . PASS END=210016997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:29:0,82,1057:0,82,255:40,0 chr1 210016998 . A . PASS END=210017020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:25:0,60,900:0,75,255:25,0 chr1 210017021 . G . PASS END=210017021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 210017022 . C . PASS END=210017024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 210017025 . T . PASS END=210017025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 210017026 . T . PASS END=210017041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,892:0,69,255:23,0 chr1 210024549 . G . PASS END=210024560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1066:0,86,255:35,0 chr1 210024561 . A . PASS END=210024561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr1 210024562 . G . PASS END=210024562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 210024563 . G . PASS END=210024563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1188:0,61,255:33,0 chr1 210024564 . C . PASS END=210024599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1219:0,91,255:40,0 chr1 210024600 . T . PASS END=210024600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1443:0,79,255:38,0 chr1 210024601 . C . PASS END=210024697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:41:0,91,1381:0,91,255:40,0 chr1 210024698 . C . PASS END=210024707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:38:0,96,1440:0,107,255:36,0 chr1 210024708 . A . PASS END=210024708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr1 210024709 . G . PASS END=210024732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:36,0 chr1 210024733 . G . PASS END=210024733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:28,0 chr1 210024734 . C . PASS END=210024734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 210024735 . G A, 43.52 PASS DP=34;MQ=250.00;MQRankSum=4.739;ReadPosRankSum=0.234;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,12,0:0.353,0.000:34:13,4,0:9,8,0:43:78,0,50,429,779,1208:255,0,255:18,0:4.3517e+01,2.1512e-04,5.3000e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,3,9:9,13,7,5 chr1 210024736 . G . PASS END=210024736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 210024737 . C . PASS END=210024744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:24,0 chr1 210024745 . C . PASS END=210024745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:20,0 chr1 210024746 . T . PASS END=210024753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,64,255:21,0 chr1 210024754 . A . PASS END=210024754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr1 210024755 . A . PASS END=210024760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 210024761 . A . PASS END=210024772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:21:0,51,765:0,56,255:19,0 chr1 210024773 . T . PASS END=210024792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,712:0,44,255:18,0 chr1 210111596 . A . PASS END=210111606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr1 210111607 . A . PASS END=210111607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 210111608 . T . PASS END=210111619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 210111620 . A . PASS END=210111623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 210116112 . G A, 154.87 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,14,0:0,22,0:105:193,108,0,1324,108,1324:255,108,0:0,0:1.5487e+02,1.0487e+02,0.0000e+00,4.5000e+02,1.3964e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,23:0,0,17,19 chr1 210126054 . G . PASS END=210126101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:88:0,120,1800:0,248,255:40,0 chr1 210186978 . T . PASS END=210187134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:39:0,101,1404:0,101,255:40,0 chr1 210187135 . T . PASS END=210187135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:35,0 chr1 210187136 . A . PASS END=210187142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1328:0,98,255:37,0 chr1 210189349 . A . PASS END=210189353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 210189354 . A . PASS END=210189354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 210189355 . T . PASS END=210189356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 210189357 . T . PASS END=210189373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:22,0 chr1 210189374 . A . PASS END=210189374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 210189375 . G . PASS END=210189381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:25,0 chr1 210189382 . C . PASS END=210190444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:81:27:0,81,964:0,81,255:40,1 chr1 210194384 . A . PASS END=210194599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:36:0,81,1215:0,97,255:40,0 chr1 210267667 . G . PASS END=210267919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:40:0,90,1350:0,110,255:40,0 chr1 210267920 . T . PASS END=210267921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 210267922 . C . PASS END=210267923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:27,0 chr1 210267924 . G . PASS END=210267924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 210267925 . T . PASS END=210267927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr1 210267928 . T . PASS END=210267931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 210267932 . C . PASS END=210267935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,83,255:27,0 chr1 210267936 . G . PASS END=210267938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 210273357 . G . PASS END=210273806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:27:0,81,1000:0,81,255:40,0 chr1 210329066 . G . PASS END=210329084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1211:0,88,255:35,0 chr1 210329085 . G . PASS END=210329085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:33,0 chr1 210329086 . C . PASS END=210329102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1268:0,95,255:37,0 chr1 210329103 . G . PASS END=210329103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr1 210329104 . T . PASS END=210329255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:38:0,87,1305:0,100,255:40,0 chr1 210332745 . C . PASS END=210332822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,120,1800:0,143,255:40,0 chr1 210334074 . A . PASS END=210334387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:34:0,84,976:0,85,255:40,0 chr1 210411306 . A . PASS END=210411312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr1 210411313 . T . PASS END=210411313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 210411314 . G . PASS END=210411314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:18,0 chr1 210411315 . G . PASS END=210411328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr1 210411329 . T . PASS END=210411332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 210411333 . T . PASS END=210411333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 210411334 . T . PASS END=210411341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 210411342 . C . PASS END=210411342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 210411343 . C . PASS END=210411371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,803:0,66,255:23,0 chr1 210411372 . G . PASS END=210411372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 210411373 . C . PASS END=210411377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 210411378 . T . PASS END=210411378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 210411379 . A . PASS END=210411384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 210411385 . C . PASS END=210411394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 210411395 . G . PASS END=210411397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 210411398 . T . PASS END=210411400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 210411401 . C . PASS END=210411401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 210411402 . A . PASS END=210411424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,47,255:18,0 chr1 210411425 . A . PASS END=210411425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr1 210411426 . G . PASS END=210411438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr1 210411439 . C . PASS END=210411448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 210411449 . G . PASS END=210411449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr1 210411450 . G . PASS END=210411473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 210411474 . C . PASS END=210411474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 210411475 . T . PASS END=210411475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr1 210411476 . G . PASS END=210411480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 210412838 . G . PASS END=210412953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,145,255:40,0 chr1 210414903 . A . PASS END=210414906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1199:0,80,255:36,0 chr1 210414907 . T . PASS END=210414907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1006:0,64,255:34,0 chr1 210414908 . C . PASS END=210414908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:47:38:0,47,1119:0,47,255:34,0 chr1 210414909 . T . PASS END=210414909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:26:38:0,26,1139:0,26,255:33,0 chr1 210414910 . C . PASS END=210414910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1210:0,64,255:34,0 chr1 210414911 . A . PASS END=210414912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 210414913 . T . PASS END=210414913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1086:0,58,255:33,0 chr1 210414914 . T . PASS END=210414917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:38:0,81,1288:0,81,255:37,0 chr1 210414918 . G . PASS END=210414918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:39:40:0,39,1129:0,39,255:33,0 chr1 210414919 . A . PASS END=210414924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1274:0,84,255:37,0 chr1 210414925 . G . PASS END=210414925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1219:0,53,255:34,0 chr1 210414926 . A . PASS END=210415682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:32:0,87,1305:0,92,255:40,0 chr1 210419145 . G . PASS END=210419272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:47:0,99,1620:0,99,255:40,0 chr1 210419917 . T . PASS END=210419947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,203,255:40,0 chr1 210502355 . A . PASS END=210502370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 210502371 . G . PASS END=210502371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 210502372 . A . PASS END=210502372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 210502373 . A . PASS END=210502374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 210502375 . T . PASS END=210502376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 210502377 . C . PASS END=210502377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 210502378 . C . PASS END=210502385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr1 210502386 . G . PASS END=210502387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 210502388 . G . PASS END=210502403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:8,0 chr1 210502404 . G . PASS END=210502406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 210502407 . C . PASS END=210502435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 210502436 . G . PASS END=210502448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr1 210502489 . A . PASS END=210502503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 210502504 . C . PASS END=210502519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:15,0 chr1 210502520 . T . PASS END=210502520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,1 chr1 210502521 . A . PASS END=210502521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:16,0 chr1 210502522 . A . PASS END=210502524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 210502525 . A . PASS END=210502533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 210502534 . A . PASS END=210502534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 210502535 . C . PASS END=210502535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 210502536 . A . PASS END=210502536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 210502537 . A . PASS END=210502538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:14,0 chr1 210502539 . A . PASS END=210502541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:16,0 chr1 210502542 . C . PASS END=210502542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:14,0 chr1 210502543 . T . PASS END=210502546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr1 210502547 . C . PASS END=210502547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 210502548 . G . PASS END=210502548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 210502549 . T . PASS END=210502552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:17,0 chr1 210502553 . C . PASS END=210502553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:14,0 chr1 210502554 . T . PASS END=210502565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 210502566 . C . PASS END=210502566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 210502567 . G . PASS END=210502575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,584:0,41,255:17,0 chr1 210502576 . C . PASS END=210502577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 210502578 . C . PASS END=210502585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,668:0,43,255:19,0 chr1 210502586 . G . PASS END=210502586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 210502587 . G . PASS END=210502587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr1 210502588 . A . PASS END=210502589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 210502590 . A . PASS END=210502590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,655:0,16,255:18,0 chr1 210502591 . G . PASS END=210502591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 210502592 . A . PASS END=210502592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,605:0,30,255:19,0 chr1 210502593 . G . PASS END=210502593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 210502594 . G . PASS END=210502595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,639:0,46,255:20,0 chr1 210502596 . A . PASS END=210502596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,613:0,30,255:17,0 chr1 210502597 . G . PASS END=210502597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:19,0 chr1 210502598 . T . PASS END=210502601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 210502602 . C . PASS END=210502602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 210502603 . G . PASS END=210502603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 210502604 . G . PASS END=210502604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 210502605 . T . PASS END=210502605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 210502606 . C . PASS END=210502606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:20,0 chr1 210502607 . G . PASS END=210502610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,763:0,66,255:23,0 chr1 210502611 . G . PASS END=210502611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:19,0 chr1 210502612 . A . PASS END=210502613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 210502614 . G . PASS END=210502614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:20,0 chr1 210502615 . A . PASS END=210502616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 210502617 . G . PASS END=210502617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:20,0 chr1 210502618 . A . PASS END=210502621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 210502622 . A . PASS END=210502622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:21,0 chr1 210502623 . A . PASS END=210502623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,629:0,22,255:19,0 chr1 210502624 . G . PASS END=210502639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 210502640 . G . PASS END=210502640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 210502641 . C . PASS END=210502643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 210502644 . A . PASS END=210502644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr1 210502645 . G . PASS END=210502647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 210502648 . C . PASS END=210502648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr1 210502649 . G . PASS END=210502649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 210502650 . C . PASS END=210502650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 210502651 . C . PASS END=210502651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,0 chr1 210502652 . C . PASS END=210502687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,892:0,69,255:24,0 chr1 210502688 . C . PASS END=210502688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 210502689 . G . PASS END=210502690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 210502691 . G . PASS END=210502691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 210502692 . C . PASS END=210502713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr1 210502714 . C . PASS END=210502715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 210502716 . C . PASS END=210502716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 210502717 . C . PASS END=210502719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 210502720 . G . PASS END=210502720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 210502721 . G . PASS END=210502747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1097:0,80,255:33,0 chr1 210502748 . G . PASS END=210502748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr1 210502749 . C . PASS END=210502827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1163:0,80,255:34,0 chr1 210502911 . A . PASS END=210502945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:95:45:0,95,1633:0,95,255:40,0 chr1 210505114 . C . PASS END=210505171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:37:0,95,1360:0,95,255:40,0 chr1 210505172 . A . PASS END=210505172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1480:0,60,255:40,0 chr1 210505173 . G . PASS END=210505176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,108,1620:0,129,255:40,0 chr1 210522277 . A . PASS END=210522371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1172:0,96,255:40,0 chr1 210522372 . A . PASS END=210522372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1170:0,101,255:26,0 chr1 210522373 . C . PASS END=210522380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:27,0 chr1 210522381 . C . PASS END=210522397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:26,0 chr1 210522398 . A . PASS END=210522400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 210522401 . G . PASS END=210522407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 210522408 . G . PASS END=210522410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 210536196 . A . PASS END=210536224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:71:0,120,1800:0,166,255:40,0 chr1 210536225 . G . PASS END=210536263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,173,255:40,0 chr1 210560812 . G . PASS END=210560822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1024:0,71,255:26,0 chr1 210560823 . C . PASS END=210560833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1092:0,87,255:29,0 chr1 210560834 . G . PASS END=210560834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:27,0 chr1 210560835 . C . PASS END=210560836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr1 210560837 . T . PASS END=210560837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 210560838 . C . PASS END=210560893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1049:0,86,255:34,0 chr1 210560894 . T . PASS END=210560911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:26,0 chr1 210560912 . T . PASS END=210560912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 210560913 . G . PASS END=210560925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 210573812 . C . PASS END=210573826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,861:0,69,255:26,0 chr1 210573827 . C . PASS END=210573827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 210573828 . T . PASS END=210573828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 210573829 . C . PASS END=210573833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 210573834 . T . PASS END=210573834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 210573835 . C . PASS END=210573979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1003:0,84,255:40,0 chr1 210573980 . A . PASS END=210573997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,81,255:26,0 chr1 210573998 . G . PASS END=210573999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr1 210574000 . A . PASS END=210574004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 210574005 . A . PASS END=210574006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 210577808 . A . PASS END=210577818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:25,0 chr1 210577819 . C . PASS END=210577819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 210577820 . A . PASS END=210577821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,969:0,75,255:26,0 chr1 210577822 . G . PASS END=210577835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr1 210577836 . A . PASS END=210577872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1038:0,84,255:33,0 chr1 210577873 . G C, 49.80 PASS DP=36;MQ=249.89;MQRankSum=5.102;ReadPosRankSum=4.595;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,17,0:0.472,0.000:36:8,10,0:11,7,0:48:85,0,50,608,649,1257:255,0,255:16,0:4.9805e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,7,10:9,10,10,7 chr1 210577874 . T . PASS END=210577893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1194:0,86,255:32,0 chr1 210577894 . G . PASS END=210577895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:30,0 chr1 210577896 . A . PASS END=210577896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 210577897 . G . PASS END=210577898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr1 210577899 . T . PASS END=210577899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:29,0 chr1 210577900 . C . PASS END=210577903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:34:0,66,1218:0,66,255:31,0 chr1 210577904 . T . PASS END=210577904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:31,0 chr1 210577905 . G . PASS END=210577906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr1 210577907 . C . PASS END=210577907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 210577908 . A . PASS END=210577909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1241:0,64,255:32,0 chr1 210577910 . C . PASS END=210577910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 210577911 . A . PASS END=210577917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:34,0 chr1 210577918 . T . PASS END=210577918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1290:0,105,255:35,0 chr1 210577919 . G . PASS END=210577920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 210577921 . T . PASS END=210577994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:36:0,84,1260:0,92,255:40,0 chr1 210577995 . T . PASS END=210577995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1099:0,77,255:27,0 chr1 210577996 . C . PASS END=210577998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:35:0,81,1215:0,95,255:28,0 chr1 210577999 . C . PASS END=210577999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:26,0 chr1 210578000 . A . PASS END=210578003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,82,255:28,0 chr1 210578004 . T . PASS END=210578004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr1 210578005 . C . PASS END=210578008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 210578009 . G . PASS END=210578009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 210578010 . A . PASS END=210578011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1023:0,38,255:28,0 chr1 210578012 . T . PASS END=210578012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:29,0 chr1 210578013 . T . PASS END=210578021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,995:0,87,255:29,0 chr1 210578022 . A . PASS END=210578022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 210578023 . G . PASS END=210578023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,988:0,51,255:26,0 chr1 210591498 . A . PASS END=210591499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr1 210591500 . G . PASS END=210591500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 210591501 . C . PASS END=210591521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 210591522 . C . PASS END=210591522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 210591523 . T . PASS END=210591525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 210591526 . A . PASS END=210591543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,604:0,45,255:16,0 chr1 210591544 . T . PASS END=210591558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,488:0,39,255:13,0 chr1 210591559 . G . PASS END=210591568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 210591569 . T . PASS END=210591569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 210591570 . T . PASS END=210591570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 210591571 . G . PASS END=210591571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 210591572 . C . PASS END=210591573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 210591574 . G . PASS END=210591574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 210591575 . G . PASS END=210591585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 210591586 . C . PASS END=210591586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:15,0 chr1 210591587 . C . PASS END=210591592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 210591593 . G . PASS END=210591594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 210591595 . T . PASS END=210591648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,638:0,41,255:19,0 chr1 210591649 . C . PASS END=210591669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 210637849 . G . PASS END=210637961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:30:0,87,1164:0,90,255:40,0 chr1 210637962 . T . PASS END=210637962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1299:0,65,255:29,0 chr1 210637963 . G . PASS END=210637973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:30,0 chr1 210637974 . A . PASS END=210637974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr1 210637975 . T . PASS END=210637975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 210637976 . G . PASS END=210637976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 210637977 . T . PASS END=210637978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 210637979 . C . PASS END=210637981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 210637982 . T . PASS END=210637988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 210637989 . G . PASS END=210637989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 210637990 . G . PASS END=210637991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 210637992 . A . PASS END=210637999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 210686497 . G . PASS END=210686532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,1:112:99:101:0,120,1800:0,255,255:40,0 chr1 210761242 . G . PASS END=210761245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 210761246 . G . PASS END=210761424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:28:0,84,1039:0,84,255:40,0 chr1 210761425 . C . PASS END=210761461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,112,1755:0,112,255:40,0 chr1 210761462 . G C, 178.97 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,20,0:0,24,0:129:217,132,0,1666,132,1666:255,132,0:0,0:1.7897e+02,1.2897e+02,0.0000e+00,4.5000e+02,1.6374e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,30:0,0,26,18 chr1 210761463 . C . PASS END=210761499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,105,1575:0,116,255:40,0 chr1 210761500 . T . PASS END=210761533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1255:0,86,255:35,0 chr1 210761534 . A . PASS END=210761534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:26,0 chr1 210761535 . C . PASS END=210761544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1247:0,89,255:31,0 chr1 210761545 . T . PASS END=210761554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,79,255:26,0 chr1 210796870 . G . PASS END=210797014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,105,1575:0,108,255:40,0 chr1 210804341 . G . PASS END=210804353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,137,255:40,0 chr1 210804354 . A . PASS END=210804354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1783:0,73,255:40,1 chr1 210804355 . T . PASS END=210804356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,111,1748:0,111,255:40,1 chr1 210804357 . T . PASS END=210804507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:50:0,120,1800:0,140,255:40,0 chr1 210847630 . G . PASS END=210847721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,105,1575:0,116,255:40,0 chr1 210852349 . T . PASS END=210852494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:36:0,81,1215:0,95,255:40,0 chr1 210852495 . G . PASS END=210852510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:26,0 chr1 210856623 . T . PASS END=210856805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1191:0,89,255:40,0 chr1 210856806 . C . PASS END=210856811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:30:0,63,990:0,63,255:26,0 chr1 210856812 . C . PASS END=210856831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 210856832 . T . PASS END=210856832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1032:0,54,255:27,0 chr1 210856833 . C . PASS END=210856863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,939:0,68,255:26,0 chr1 210856864 . A . PASS END=210856866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 210856867 . T . PASS END=210856867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 210856868 . C . PASS END=210856874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 210856875 . G . PASS END=210856876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1072:0,65,255:30,0 chr1 210856877 . T . PASS END=210856877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 210856878 . G . PASS END=210856878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 210856879 . G . PASS END=210856894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 210856895 . G . PASS END=210856911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 210856912 . A . PASS END=210856946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr1 210856947 . A . PASS END=210856947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 210856948 . C . PASS END=210856948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 210856949 . T . PASS END=210856962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:65:25:0,65,984:0,65,255:26,0 chr1 210856963 . G . PASS END=210856963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 210856964 . T . PASS END=210856964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 210856965 . C . PASS END=210856973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:31,0 chr1 210856974 . T . PASS END=210856974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr1 210856975 . G . PASS END=210856985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:32,0 chr1 210856986 . T . PASS END=210856986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:27,0 chr1 210856987 . G . PASS END=210856987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:27,0 chr1 210856988 . A . PASS END=210856988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:27,0 chr1 210856989 . C . PASS END=210857005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1050:0,80,255:30,0 chr1 210857006 . G . PASS END=210857006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 210857007 . A . PASS END=210857011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 210857012 . T . PASS END=210857012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,960:0,76,255:26,0 chr1 210857013 . C . PASS END=210857050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1066:0,80,255:33,0 chr1 210857051 . C . PASS END=210857058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:29:0,71,1061:0,71,255:26,0 chr1 210857059 . C . PASS END=210857059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:25,0 chr1 210857060 . C . PASS END=210857061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 210857062 . C . PASS END=210857064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 210857065 . G . PASS END=210857065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 210857066 . C . PASS END=210857067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 210857068 . T . PASS END=210857068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,901:0,50,255:26,0 chr1 210857069 . C . PASS END=210857069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 210857070 . T . PASS END=210857071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:28,0 chr1 210857072 . T . PASS END=210857072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:27,0 chr1 210857073 . G . PASS END=210857073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr1 210857074 . A . PASS END=210857074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr1 210857075 . A . PASS END=210857076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 210857077 . C . PASS END=210857089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,970:0,67,255:25,0 chr1 210857090 . T . PASS END=210857091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 210857092 . C . PASS END=210857093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 210857094 . C . PASS END=210857097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:20,0 chr1 210857098 . G . PASS END=210857101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 210857102 . A . PASS END=210857123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,44,255:19,0 chr1 210857124 . G . PASS END=210857132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 210857133 . C . PASS END=210857133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 210857134 . T . PASS END=210857138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 210857139 . C . PASS END=210857139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 210857140 . C . PASS END=210857140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 210857141 . C . PASS END=210857141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 210857142 . T . PASS END=210857149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr1 210857150 . G . PASS END=210857150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 210857151 . T . PASS END=210857154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 210857155 . T . PASS END=210857188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:17:0,41,637:0,41,255:19,0 chr1 210857189 . C . PASS END=210857189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr1 210857190 . C . PASS END=210857223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,576:0,40,255:19,0 chr1 210857224 . A . PASS END=210857224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 210857225 . C . PASS END=210857239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 210857240 . C . PASS END=210857242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 210857243 . T . PASS END=210857262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 210857263 . G . PASS END=210857264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 210857265 . G . PASS END=210857290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr1 210857291 . T . PASS END=210857291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:21,0 chr1 210857292 . C . PASS END=210857323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 210857324 . C . PASS END=210857324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 210857325 . T . PASS END=210857340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,953:0,62,255:25,0 chr1 210857341 . C . PASS END=210857342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr1 210857343 . G . PASS END=210857343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:24,0 chr1 210857344 . G . PASS END=210857349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,834:0,42,255:26,0 chr1 210857350 . T . PASS END=210857350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 210857351 . T . PASS END=210857351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 210857352 . C . PASS END=210857352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:25,0 chr1 210857353 . T . PASS END=210857353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,869:0,12,255:25,0 chr1 210857354 . G . PASS END=210857354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:26,0 chr1 210857355 . C . PASS END=210857355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 210857356 . T . PASS END=210857356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:27,0 chr1 210857357 . G . PASS END=210857358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:27,0 chr1 210857359 . C . PASS END=210857360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:27,0 chr1 210857361 . G . PASS END=210857361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 210857362 . A . PASS END=210857365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,926:0,48,255:27,0 chr1 210857366 . T . PASS END=210857367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 210857368 . T . PASS END=210857373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,1008:0,48,255:27,0 chr1 210857374 . A . PASS END=210857374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,901:0,32,255:24,0 chr1 210857375 . G . PASS END=210857376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:29:0,41,1008:0,41,255:28,0 chr1 210857377 . C . PASS END=210857377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 210857378 . G . PASS END=210857378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1147:0,44,255:29,0 chr1 210857379 . C . PASS END=210857380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:28,0 chr1 210857381 . G . PASS END=210857381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1133:0,25,255:28,0 chr1 210857382 . G . PASS END=210857382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:27,0 chr1 210857383 . A . PASS END=210857383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 210857384 . C . PASS END=210857387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:32:0,60,1102:0,60,255:26,0 chr1 210857388 . G . PASS END=210857403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1135:0,83,255:31,0 chr1 210857404 . A . PASS END=210857404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1095:0,71,255:30,0 chr1 210857405 . T . PASS END=210857411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:30,0 chr1 210857412 . G . PASS END=210857412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:28,0 chr1 210857413 . G . PASS END=210857413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 210857414 . C . PASS END=210857414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:27,0 chr1 210857415 . C . PASS END=210857415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 210857416 . T . PASS END=210857416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:28,0 chr1 210857417 . C . PASS END=210857419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 210857420 . T . PASS END=210857420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,968:0,57,255:26,0 chr1 210857421 . C . PASS END=210857421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 210857422 . T . PASS END=210857423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 210857424 . T . PASS END=210857424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:28,0 chr1 210857425 . C . PASS END=210857427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1031:0,71,255:28,0 chr1 210857428 . T . PASS END=210857428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 210857429 . T . PASS END=210857429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:27,0 chr1 210857430 . C . PASS END=210857430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 210857431 . A . PASS END=210857431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 210857432 . T . PASS END=210857432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,909:0,40,255:25,0 chr1 210857433 . G . PASS END=210857441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:25,0 chr1 210857442 . C . PASS END=210857442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:22,0 chr1 210857443 . T . PASS END=210857447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 210857448 . A . PASS END=210857455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,58,255:19,0 chr1 210857456 . C . PASS END=210857456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:17,0 chr1 210857457 . A G, 110.20 PASS DP=21;MQ=246.91;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,13,0:0,8,0:60:148,63,0,808,63,808:255,72,0:0,0:1.1020e+02,6.0203e+01,4.1418e-06,4.5000e+02,9.4973e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,12:0,0,9,12 chr1 210857458 . T . PASS END=210857462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:41:20:0,41,765:0,41,255:18,0 chr1 210857463 . G . PASS END=210857463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,620:0,13,255:16,0 chr1 210857464 . A . PASS END=210857465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:17,0 chr1 210857466 . C . PASS END=210857466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,588:0,27,255:15,0 chr1 210857467 . T . PASS END=210857470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:17,0 chr1 210857471 . G . PASS END=210857471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,657:0,30,255:15,0 chr1 210857472 . G . PASS END=210857473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,720:0,47,255:16,0 chr1 210857474 . A . PASS END=210857474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:15,0 chr1 210857475 . C . PASS END=210857475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr1 210857476 . A . PASS END=210857480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,43,255:13,0 chr1 210948690 . C . PASS END=210948886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:32:0,96,1166:0,96,255:40,0 chr1 210970850 . C . PASS END=210970887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,799:0,66,255:24,0 chr1 210970888 . A . PASS END=210970888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:23,0 chr1 210970889 . G . PASS END=210970894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 210970895 . C . PASS END=210970895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 210970896 . A . PASS END=210970920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,682:0,61,255:26,0 chr1 210970921 . A . PASS END=210970921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 210970922 . C . PASS END=210970926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,907:0,72,255:25,0 chr1 210970927 . T . PASS END=210970927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:19,0 chr1 210970928 . C . PASS END=210970933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 210970934 . C . PASS END=210970935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 210970936 . T . PASS END=210970941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 210970942 . A . PASS END=210970942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:21,0 chr1 210970943 . T . PASS END=210970958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 210970959 . A . PASS END=210970974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:18:0,50,765:0,50,255:19,0 chr1 210970975 . A . PASS END=210970975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 210970976 . A . PASS END=210970977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 210970978 . T . PASS END=210970984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:38:17:0,38,585:0,38,255:13,0 chr1 210970985 . C . PASS END=210970986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 210970987 . A . PASS END=210970987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 210970988 . G . PASS END=210971004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:18,0 chr1 210971005 . T . PASS END=210971005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 210971006 . C . PASS END=210971012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 210971013 . C . PASS END=210971013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 210971014 . A . PASS END=210971041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 210971042 . C . PASS END=210971042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 210971043 . C . PASS END=210971060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 210971061 . G . PASS END=210971061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 210971062 . C . PASS END=210971066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 210971067 . G . PASS END=210971067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 210971068 . T . PASS END=210971068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 210971069 . C . PASS END=210971070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 210971071 . G . PASS END=210971071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 210971072 . C . PASS END=210971092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 210971093 . T . PASS END=210971093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:9,0 chr1 210971094 . C . PASS END=210971102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr1 210977309 . C . PASS END=210977331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1308:0,101,255:40,0 chr1 210977332 . A . PASS END=210977332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1518:0,63,255:40,0 chr1 210977333 . C . PASS END=210977508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,120,1800:0,124,255:40,0 chr1 211034340 . T . PASS END=211034343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 211034344 . A . PASS END=211034344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,673:0,55,255:23,0 chr1 211034345 . G . PASS END=211034346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 211034347 . T . PASS END=211034350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 211034351 . C . PASS END=211034355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 211034356 . G . PASS END=211034356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:26,0 chr1 211034357 . G . PASS END=211034366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:30,0 chr1 211034367 . A . PASS END=211034367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 211034368 . A . PASS END=211034373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1070:0,90,255:30,0 chr1 211034374 . T . PASS END=211034374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 211034375 . A . PASS END=211034400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:30:0,86,1085:0,86,255:39,0 chr1 211034401 . A . PASS END=211034401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1197:0,73,255:35,0 chr1 211034402 . C . PASS END=211034465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1322:0,84,255:40,0 chr1 211034466 . A . PASS END=211034466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1396:0,76,255:33,0 chr1 211034467 . T . PASS END=211034482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1310:0,81,255:37,0 chr1 211034483 . A . PASS END=211034483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:44:38:0,44,1141:0,44,255:33,0 chr1 211034484 . C . PASS END=211034489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1260:0,98,255:33,0 chr1 211034490 . G . PASS END=211034495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:38:0,72,1080:0,98,255:26,0 chr1 211034496 . A . PASS END=211034497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 211034498 . A . PASS END=211034498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:25,0 chr1 211034499 . C . PASS END=211034500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr1 211034501 . C . PASS END=211034501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 211034502 . G . PASS END=211034502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 211034503 . T . PASS END=211034503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 211034504 . A . PASS END=211034508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 211034509 . T . PASS END=211034509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,901:0,45,255:27,0 chr1 211034510 . C . PASS END=211034511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 211034512 . T . PASS END=211034512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:27,0 chr1 211034513 . C . PASS END=211034517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 211034518 . C . PASS END=211034518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 211034519 . A . PASS END=211034522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 211034523 . T . PASS END=211034525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1037:0,71,255:26,0 chr1 211034526 . C . PASS END=211034527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 211034528 . C . PASS END=211034529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 211034530 . T . PASS END=211034530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 211034531 . C . PASS END=211034535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 211034536 . T . PASS END=211034536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:30:0,54,810:0,90,255:18,0 chr1 211092982 . A . PASS END=211093002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,945:0,65,255:26,0 chr1 211093003 . C . PASS END=211093114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1027:0,80,255:40,0 chr1 211093115 . A . PASS END=211093119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:26,0 chr1 211093120 . C . PASS END=211093124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 211093125 . C . PASS END=211093128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 211093129 . T . PASS END=211093130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 211093131 . C . PASS END=211093133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 211093134 . G . PASS END=211093139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 211093140 . G . PASS END=211093142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 211093143 . C . PASS END=211093147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 211093148 . A . PASS END=211093150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 211093151 . C . PASS END=211093166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,86,255:34,0 chr1 211093167 . A . PASS END=211093167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1178:0,63,255:32,0 chr1 211093168 . T . PASS END=211093182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1318:0,92,255:35,0 chr1 211093183 . G . PASS END=211093183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1191:0,45,255:31,0 chr1 211093184 . G . PASS END=211093287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:35:0,92,1288:0,92,255:40,0 chr1 211093288 . A . PASS END=211093288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1299:0,77,255:39,0 chr1 211093289 . C . PASS END=211093389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1178:0,86,255:40,0 chr1 211093390 . A . PASS END=211093411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:26:0,71,1031:0,71,255:26,0 chr1 211192125 . C . PASS END=211192504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:40:0,85,1405:0,85,255:40,2 chr1 211192505 . T . PASS END=211192505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:71:48:0,71,1357:0,71,255:40,0 chr1 211192506 . C . PASS END=211192594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:39:0,84,1260:0,90,255:40,2 chr1 211192595 . G . PASS END=211192598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:36:0,78,1170:0,87,255:26,0 chr1 211256122 . C . PASS END=211256240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:38:0,88,1543:0,88,255:40,0 chr1 211263904 . C . PASS END=211264032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:97:44:0,97,1620:0,97,255:40,0 chr1 211276838 . T . PASS END=211276865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,165,255:40,0 chr1 211276866 . G . PASS END=211276944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:67:0,120,1800:0,189,255:40,0 chr1 211280596 . C . PASS END=211280604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1130:0,88,255:35,0 chr1 211280605 . C . PASS END=211280605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:34,0 chr1 211280606 . T . PASS END=211280676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:35:0,88,1171:0,88,255:40,0 chr1 211280677 . G . PASS END=211280686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1305:0,92,255:34,0 chr1 211280687 . C . PASS END=211280692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:36:0,60,900:0,81,255:24,0 chr1 211280693 . G . PASS END=211280695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:42:36:0,42,630:0,91,255:19,0 chr1 211280696 . C . PASS END=211280703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:30:33:0,30,450:0,83,255:13,0 chr1 211280704 . A . PASS END=211280707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:21:31:0,21,315:0,93,255:8,0 chr1 211280708 . C . PASS END=211280714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:12:30:0,12,180:0,57,255:6,0 chr1 211280715 . A . PASS END=211280719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:6:28:0,6,90:0,54,255:3,0 chr1 211307209 . C . PASS END=211307245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,900:0,72,255:26,0 chr1 211307246 . T . PASS END=211307247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 211307248 . G . PASS END=211307273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 211307274 . C . PASS END=211307278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 211307279 . C . PASS END=211307284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 211307285 . C . PASS END=211307287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr1 211432903 . A . PASS END=211432909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,805:0,75,255:25,0 chr1 211432910 . G . PASS END=211432912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 211432913 . T . PASS END=211432913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 211432914 . G . PASS END=211432915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 211432916 . T . PASS END=211432916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 211432917 . G . PASS END=211432980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:34:0,89,1167:0,89,255:40,2 chr1 211432981 . G . PASS END=211432983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:75:48:0,75,1662:0,75,255:40,2 chr1 211432984 . G . PASS END=211433071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:44:0,89,1485:0,89,255:40,0 chr1 211433450 . A . PASS END=211433506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:33:0,93,1182:0,97,255:40,0 chr1 211444574 . G . PASS END=211444651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:43:0,90,1521:0,90,255:40,0 chr1 211444870 . G . PASS END=211444877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr1 211447552 . T . PASS END=211447587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:89:0,120,1800:0,251,255:40,0 chr1 211447588 . G . PASS END=211447604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:90:0,120,1800:0,241,255:40,0 chr1 211449599 . G . PASS END=211449760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:32:0,93,1395:0,96,255:40,0 chr1 211451459 . C . PASS END=211451583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:92:35:0,92,1294:0,92,255:40,0 chr1 211452580 . T . PASS END=211452640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:74:0,120,1800:0,143,255:40,0 chr1 211452641 . A . PASS END=211452658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:81:0,120,1800:0,178,255:40,1 chr1 211462520 . G . PASS END=211462520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 211462521 . G . PASS END=211462712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:31:0,84,1260:0,89,255:40,0 chr1 211462713 . T . PASS END=211462713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 211462714 . G . PASS END=211462718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:27,0 chr1 211462719 . T . PASS END=211462737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,889:0,67,255:26,0 chr1 211462738 . G . PASS END=211462738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 211464866 . T . PASS END=211464941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,101,1457:0,101,255:40,0 chr1 211469018 . G . PASS END=211469095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:77:0,120,1800:0,195,255:40,0 chr1 211471152 . A . PASS END=211471185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:85:0,120,1800:0,226,255:40,0 chr1 211477425 . T . PASS END=211477482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,195,255:40,0 chr1 211485697 . G . PASS END=211485719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,206,255:40,0 chr1 211486062 . G . PASS END=211486298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,112,1430:0,112,255:40,0 chr1 211486299 . A . PASS END=211486299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1283:0,76,255:36,0 chr1 211486300 . G . PASS END=211486336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,94,255:39,0 chr1 211486766 . G . PASS END=211486886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:33:0,99,1182:0,99,255:40,0 chr1 211486887 . T . PASS END=211486887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1601:0,67,255:40,0 chr1 211486888 . G . PASS END=211487021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,86,255:40,0 chr1 211487022 . A . PASS END=211487041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1047:0,71,255:26,0 chr1 211487042 . A . PASS END=211487042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:24,0 chr1 211487043 . C . PASS END=211487063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 211487064 . C . PASS END=211487068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:23:0,56,837:0,56,255:19,0 chr1 211487069 . C . PASS END=211487075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 211487076 . G . PASS END=211487076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 211487077 . A . PASS END=211487082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 211487083 . G . PASS END=211487092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:16,0 chr1 211487093 . C . PASS END=211487110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,466:0,39,255:13,0 chr1 211500041 . A . PASS END=211500081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,862:0,61,255:26,0 chr1 211500082 . G . PASS END=211500082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 211500083 . C . PASS END=211500088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,61,255:17,0 chr1 211500089 . C . PASS END=211500099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:15:0,30,450:0,45,255:13,0 chr1 211500100 . C . PASS END=211500103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:13:0,27,405:0,39,255:9,0 chr1 211500104 . C . PASS END=211500104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 211500105 . G . PASS END=211500109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:11:0,23,405:0,23,255:9,0 chr1 211500110 . T . PASS END=211500110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 211500111 . C . PASS END=211500112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:8,0 chr1 211500113 . G . PASS END=211500113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 211500114 . C . PASS END=211500116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 211500117 . G . PASS END=211500118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:13:10:0,13,270:0,13,255:7,0 chr1 211500119 . G T, 48.01 PASS DP=9;MQ=250.00;MQRankSum=2.054;ReadPosRankSum=0.248;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,3,0:0.333,0.000:9:2,0,0:4,3,0:46:83,0,47,107,186,293:95,0,180:4,0:4.8011e+01,1.1209e-04,4.9990e+01,1.0731e+02,2.2051e+02,2.9605e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,6,1,2:4,2,2,1 chr1 211500120 . C . PASS END=211500123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr1 211500124 . G . PASS END=211500125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,332:0,14,255:8,0 chr1 211500126 . C . PASS END=211500126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 211500127 . C . PASS END=211500131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:4,0 chr1 211500132 . C . PASS END=211500156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,116:3,0 chr1 211500157 . C . PASS END=211500231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 211526581 . A . PASS END=211526585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 211526586 . C . PASS END=211526615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:26,0 chr1 211526616 . G . PASS END=211526616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 211526617 . T . PASS END=211526632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,945:0,64,255:26,0 chr1 211526633 . A . PASS END=211526641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr1 211526642 . A . PASS END=211526667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,976:0,65,255:24,0 chr1 211526668 . C . PASS END=211526669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 211526670 . G . PASS END=211526683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:24,0 chr1 211526684 . T . PASS END=211526684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,656:0,41,255:22,0 chr1 211526685 . T . PASS END=211526702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,902:0,75,255:25,0 chr1 211526703 . A . PASS END=211526703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:22,0 chr1 211526704 . G . PASS END=211526753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr1 211526754 . C . PASS END=211526766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:18:0,51,765:0,54,255:18,0 chr1 211526767 . C . PASS END=211526767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 211526768 . C . PASS END=211526783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,482:0,42,255:17,0 chr1 211526784 . G . PASS END=211526799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 211527752 . A . PASS END=211527809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,158,255:40,0 chr1 211529709 . G . PASS END=211529729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1252:0,95,255:37,0 chr1 211529730 . A . PASS END=211529730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr1 211529731 . A . PASS END=211529810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,110,1286:0,110,255:40,0 chr1 211533221 . C . PASS END=211533418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1305:0,95,255:40,0 chr1 211534044 . A . PASS END=211534121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:77:0,120,1800:0,200,255:40,0 chr1 211534430 . G . PASS END=211534504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,109,1770:0,109,255:40,0 chr1 211538718 . G . PASS END=211538830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1191:0,91,255:40,0 chr1 211538831 . A . PASS END=211538831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:32,0 chr1 211538832 . T . PASS END=211538834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1209:0,89,255:34,0 chr1 211542794 . A . PASS END=211542934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:52:0,120,1800:0,148,255:40,0 chr1 211544644 . G . PASS END=211544812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:31:0,87,1141:0,92,255:40,0 chr1 211545470 . C . PASS END=211545471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 211545472 . G . PASS END=211545476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1156:0,83,255:35,0 chr1 211545477 . A . PASS END=211545477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1193:0,75,255:34,0 chr1 211545478 . G . PASS END=211545495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:36:0,83,1235:0,83,255:37,0 chr1 211545496 . C . PASS END=211546037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1115:0,80,255:40,0 chr1 211546038 . T . PASS END=211546038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:28,0 chr1 211546039 . C . PASS END=211546039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 211546040 . T . PASS END=211546040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,965:0,62,255:28,0 chr1 211546041 . C . PASS END=211546044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 211649897 . T . PASS END=211649897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 211649914 . G . PASS END=211649914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 211649927 . T . PASS END=211649927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 211649976 . T . PASS END=211649976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 211650048 . G . PASS END=211650048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1565:0,110,255:38,0 chr1 211650061 . C . PASS END=211650061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 211650067 . G . PASS END=211650067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 211650131 . T . PASS END=211650131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 211650240 . A . PASS END=211650240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 211650280 . C . PASS END=211650280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 211650297 . G . PASS END=211650297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 211650371 . C . PASS END=211650371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 211650395 . G . PASS END=211650395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 211651036 . A . PASS END=211651036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:59:0,120,1800:0,144,255:40,0 chr1 211651055 . C . PASS END=211651055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 211651068 . C . PASS END=211651068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr1 211651072 . C . PASS END=211651072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 211651091 . A . PASS END=211651091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 211651101 . C . PASS END=211651101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,151,255:40,0 chr1 211651270 . G . PASS END=211651270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 211651373 . G . PASS END=211651373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 211651496 . G . PASS END=211651496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 211651564 . G . PASS END=211651564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,108,1620:0,129,255:36,0 chr1 211651640 . A . PASS END=211651640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr1 211651786 . G . PASS END=211651788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1252:0,97,255:33,0 chr1 211651851 . C . PASS END=211651851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 211652048 . C . PASS END=211652048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 211652115 . A . PASS END=211652115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 211652165 . G . PASS END=211652165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 211652334 . C . PASS END=211652334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 211652378 . T . PASS END=211652385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,939:0,64,255:25,0 chr1 211652386 . C . PASS END=211652387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:22,0 chr1 211652388 . T . PASS END=211652389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 211652390 . G . PASS END=211652391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr1 211652392 . G . PASS END=211652406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 211652407 . G . PASS END=211652407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 211652408 . C . PASS END=211652409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 211652410 . T . PASS END=211652411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 211652412 . C . PASS END=211652415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 211652416 . A . PASS END=211652416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 211652417 . G . PASS END=211652420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 211652421 . C . PASS END=211652437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 211652438 . G . PASS END=211652447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 211652448 . A . PASS END=211652448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 211652449 . C . PASS END=211652455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,939:0,66,255:26,0 chr1 211652456 . G . PASS END=211652546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1067:0,84,255:34,0 chr1 211652547 . C . PASS END=211652547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 211652548 . G . PASS END=211652565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:31,0 chr1 211652566 . C . PASS END=211652566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr1 211652567 . C . PASS END=211652569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 211652570 . T . PASS END=211652570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:31,0 chr1 211652571 . T . PASS END=211652571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 211652572 . C . PASS END=211652573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr1 211652574 . T . PASS END=211652591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:31,0 chr1 211652592 . A . PASS END=211652669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:26,0 chr1 211654461 . C . PASS END=211654624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1164:0,83,255:40,0 chr1 211654625 . G . PASS END=211654625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr1 211654626 . C . PASS END=211654669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1235:0,91,255:34,0 chr1 211654670 . T . PASS END=211654670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:28,0 chr1 211654671 . A . PASS END=211654671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 211654672 . A . PASS END=211654672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1101:0,57,255:28,0 chr1 211654673 . G . PASS END=211654675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 211654676 . T . PASS END=211654676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:26,0 chr1 211654677 . C . PASS END=211654680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 211654681 . A . PASS END=211654681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:27,0 chr1 211654682 . G . PASS END=211654687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 211654688 . T . PASS END=211654688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:25,0 chr1 211654689 . C . PASS END=211654702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr1 211654703 . T . PASS END=211654703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:31,0 chr1 211654704 . G . PASS END=211654756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:34,0 chr1 211654757 . T . PASS END=211654769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:24,0 chr1 211654770 . T . PASS END=211654772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr1 211654773 . T . PASS END=211654777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 211654778 . C . PASS END=211654793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,651:0,41,255:19,0 chr1 211665100 . T . PASS END=211665100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 211665123 . C . PASS END=211665123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 211665236 . G . PASS END=211665237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 211665260 . G . PASS END=211665260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 211665286 . C . PASS END=211665287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 211665590 . A . PASS END=211665590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 211665599 . C . PASS END=211665600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 211665634 . C . PASS END=211665634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr1 211665651 . C . PASS END=211665651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:35,0 chr1 211665667 . C . PASS END=211665667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 211665735 . C . PASS END=211665735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 211665807 . C . PASS END=211665807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 211665809 . C . PASS END=211665809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 211665866 . C . PASS END=211665866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 211665979 . G . PASS END=211665979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 211666020 . C . PASS END=211666020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 211666129 . C . PASS END=211666129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 211666147 . G . PASS END=211666147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr1 211666201 . C . PASS END=211666201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 211666213 . T . PASS END=211666213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,102,1530:0,141,255:34,0 chr1 211666215 . C . PASS END=211666215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,105,1575:0,138,255:35,0 chr1 211666255 . A . PASS END=211666255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 211748730 . T . PASS END=211749567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:43:0,102,1462:0,102,255:40,0 chr1 211749568 . T . PASS END=211749568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:65:54:0,65,1570:0,65,255:40,0 chr1 211749569 . C . PASS END=211749603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:43:0,81,1215:0,99,255:40,0 chr1 211749604 . G . PASS END=211749630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr1 211749631 . T . PASS END=211749631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 211751333 . C . PASS END=211751338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 211751339 . G . PASS END=211751339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 211751340 . G . PASS END=211751355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 211751356 . T . PASS END=211751356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,513:0,37,255:16,0 chr1 211751357 . T . PASS END=211751367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:19,0 chr1 211751368 . G . PASS END=211751371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 211751372 . T . PASS END=211751375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 211751376 . C . PASS END=211751376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr1 211751377 . A . PASS END=211751392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:19,0 chr1 211751393 . C . PASS END=211751397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 211751398 . T . PASS END=211751398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 211751399 . G . PASS END=211751417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 211751418 . C . PASS END=211751419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 211751420 . G . PASS END=211751428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 211751429 . T . PASS END=211751429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 211751430 . G . PASS END=211751437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr1 211751438 . T . PASS END=211751439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 211751440 . C . PASS END=211751459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,760:0,63,255:22,0 chr1 211751460 . A . PASS END=211751460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 211751461 . A . PASS END=211751465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr1 211751466 . A . PASS END=211751483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:18,0 chr1 211751484 . G . PASS END=211751484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 211751485 . T . PASS END=211751494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,604:0,48,255:19,0 chr1 211751495 . C . PASS END=211751499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 211751500 . C . PASS END=211751500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 211751501 . C . PASS END=211751558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 211751559 . G . PASS END=211751607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,615:0,51,255:18,0 chr1 211751608 . A . PASS END=211751615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 211751616 . C . PASS END=211751617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 211751618 . G . PASS END=211751618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 211751619 . C . PASS END=211751630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 211751631 . G . PASS END=211751636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 211751637 . C . PASS END=211751637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 211751638 . T . PASS END=211751669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 211751670 . G . PASS END=211751683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 211751684 . C . PASS END=211751684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 211751685 . A . PASS END=211751688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 211751689 . A . PASS END=211751692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 211751693 . A . PASS END=211751700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 211751701 . T . PASS END=211751746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr1 211751747 . T . PASS END=211751747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 211751748 . C . PASS END=211751767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 211751768 . G . PASS END=211751773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:15,0 chr1 211751774 . C . PASS END=211751774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr1 211751775 . G . PASS END=211751775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 211751776 . A . PASS END=211751778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 211751779 . C . PASS END=211751779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 211751780 . G . PASS END=211751781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 211751782 . T . PASS END=211751802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,576:0,44,255:19,0 chr1 211751803 . A . PASS END=211751803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 211751804 . G . PASS END=211751806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 211751807 . C . PASS END=211751807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 211751808 . C . PASS END=211751809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 211751810 . G . PASS END=211751811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 211751812 . A . PASS END=211751817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 211751818 . G . PASS END=211751819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 211751820 . C . PASS END=211751820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 211751821 . A . PASS END=211751821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 211751822 . G . PASS END=211751823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr1 211751824 . A . PASS END=211751826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 211751827 . T . PASS END=211751827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr1 211751828 . G . PASS END=211751829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 211751830 . A . PASS END=211751830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 211751831 . A . PASS END=211751831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr1 211751832 . G . PASS END=211751832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:22,0 chr1 211751833 . G . PASS END=211751834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,937:0,40,255:23,0 chr1 211751835 . G . PASS END=211751839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 211751840 . A . PASS END=211751840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:24,0 chr1 211751841 . G . PASS END=211751843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:26:0,71,1047:0,71,255:25,0 chr1 211751844 . C . PASS END=211751845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:24,0 chr1 211751846 . T . PASS END=211751849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 211751850 . C . PASS END=211751850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 211751851 . A . PASS END=211751852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 211751853 . C . PASS END=211751853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 211751854 . G . PASS END=211751854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 211751855 . A . PASS END=211751855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 211751856 . C . PASS END=211751856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 211751857 . G . PASS END=211751858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 211751859 . G . PASS END=211751859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 211751860 . G . PASS END=211751860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:22,0 chr1 211751861 . T . PASS END=211751889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,913:0,62,255:26,0 chr1 211751890 . A . PASS END=211751891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:20,0 chr1 211751892 . G . PASS END=211751893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 211751894 . A . PASS END=211751894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 211751895 . C . PASS END=211751901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 211751902 . G . PASS END=211751902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 211751903 . T . PASS END=211751908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 211751909 . C . PASS END=211751927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:18,0 chr1 211751928 . G . PASS END=211751928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 211751929 . C . PASS END=211751938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 211751939 . G . PASS END=211751945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 211751946 . A . PASS END=211751954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:12:10:0,12,180:0,14,255:4,0 chr1 211836768 . C . PASS END=211836769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 211836770 . A . PASS END=211836770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 211836771 . G . PASS END=211836772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 211836773 . G . PASS END=211836773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 211836774 . C . PASS END=211836782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:31,0 chr1 211836783 . G . PASS END=211836783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 211836784 . A . PASS END=211836792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1097:0,93,255:31,0 chr1 211836793 . C . PASS END=211836793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:24,0 chr1 211836794 . T . PASS END=211836803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,919:0,70,255:26,0 chr1 211836804 . G . PASS END=211836819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:29,0 chr1 211836820 . T . PASS END=211836820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 211836821 . C . PASS END=211836821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 211836822 . T . PASS END=211836822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 211836823 . G . PASS END=211836838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:32,0 chr1 211836839 . G . PASS END=211836839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:27,0 chr1 211836840 . C . PASS END=211836994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:37:0,99,1485:0,110,255:40,0 chr1 211840404 . T . PASS END=211840423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,787:0,66,255:23,0 chr1 211840424 . T . PASS END=211840424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 211840425 . G . PASS END=211840431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,829:0,69,255:23,0 chr1 211840432 . A . PASS END=211840432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 211840433 . A . PASS END=211840481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,825:0,69,255:26,0 chr1 211840482 . C . PASS END=211840482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 211840483 . T . PASS END=211840485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 211840486 . A . PASS END=211840486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 211840487 . G . PASS END=211840488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 211840489 . A . PASS END=211840490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:22,0 chr1 211840491 . G . PASS END=211840492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 211840493 . T . PASS END=211840493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 211840494 . G . PASS END=211840506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 211840507 . A . PASS END=211840509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,847:0,58,255:20,0 chr1 211840510 . T . PASS END=211840512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 211840513 . T . PASS END=211840521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,50,255:19,0 chr1 211840522 . G . PASS END=211840535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:33:15:0,33,495:0,44,255:13,0 chr1 211840536 . T . PASS END=211840536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr1 211840537 . G . PASS END=211840537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 211840538 . C . PASS END=211840538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 211840539 . T . PASS END=211840539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 211840540 . A . PASS END=211840540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 211840541 . G . PASS END=211840541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 211840542 . T . PASS END=211840543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 211840544 . T . PASS END=211840544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,354:0,25,255:12,0 chr1 211840545 . C . PASS END=211840555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 211840556 . A . PASS END=211840556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 211840557 . A . PASS END=211840563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 211840564 . T . PASS END=211840566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 211840567 . T . PASS END=211840567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:13,0 chr1 211840568 . C . PASS END=211840572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 211840573 . T . PASS END=211840573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 211842455 . G . PASS END=211842469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1336:0,97,255:38,0 chr1 211842470 . C . PASS END=211842471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1329:0,68,255:39,0 chr1 211842472 . C . PASS END=211842674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:87:40:0,87,1388:0,87,255:40,0 chr1 211843623 . C . PASS END=211843629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1172:0,85,255:31,0 chr1 211843630 . T . PASS END=211843630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:29,0 chr1 211843631 . T . PASS END=211843691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1247:0,89,255:40,0 chr1 211843692 . T . PASS END=211843728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,99,1575:0,99,255:40,0 chr1 211843729 . C T, 49.98 PASS DP=45;MQ=205.43;MQRankSum=2.940;ReadPosRankSum=1.260;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:10,13,0:13,9,0:47:85,0,47,185,185,185:255,0,255:16,0:4.9979e+01,8.6978e-05,5.0000e+01,1.8475e+02,2.1952e+02,1.8776e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,13,6,16:13,10,11,11 chr1 211843730 . T . PASS END=211843742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:38:0,84,1381:0,84,255:35,0 chr1 211843743 . T . PASS END=211843749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:26,0 chr1 211844544 . A . PASS END=211844626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:46:0,93,1395:0,118,255:40,0 chr1 211846825 . A . PASS END=211846838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:57:0,120,1800:0,172,255:40,0 chr1 211846839 . A . PASS END=211846875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,190,255:40,0 chr1 211846876 . A G, 295.43 PASS DP=83;MQ=198.21;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,83,0:1.000,0.000:83:0,35,0:0,48,0:245:333,248,0,3131,248,3131:255,249,0:0,0:2.9543e+02,2.4543e+02,0.0000e+00,4.5000e+02,2.8020e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,47:0,0,44,39 chr1 211846877 . T . PASS END=211846913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:83:0,120,1800:0,224,255:40,0 chr1 211846914 . T . PASS END=211847051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:31:0,84,1260:0,92,255:40,0 chr1 211847052 . C . PASS END=211847065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr1 211847638 . C . PASS END=211847855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:86:39:0,86,1429:0,86,255:40,0 chr1 211848726 . C . PASS END=211848748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,692:0,51,255:19,0 chr1 211848749 . T . PASS END=211848757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:21,0 chr1 211848758 . A . PASS END=211848760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 211848761 . G . PASS END=211848782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:22,0 chr1 211848783 . G . PASS END=211848812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,629:0,54,255:18,0 chr1 211848813 . G . PASS END=211848813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 211848814 . G . PASS END=211848821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr1 211923241 . C . PASS END=211923392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1263:0,81,255:40,0 chr1 211924303 . C . PASS END=211924409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,120,1800:0,123,255:40,0 chr1 211952260 . C . PASS END=211952386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:96:32:0,96,1188:0,96,255:40,0 chr1 211956571 . C . PASS END=211956575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,928:0,81,255:29,0 chr1 211956576 . T . PASS END=211956578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 211956579 . T . PASS END=211956579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr1 211956580 . T . PASS END=211956580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 211956581 . A . PASS END=211956581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 211956582 . G . PASS END=211956582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 211956583 . C . PASS END=211956584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 211956585 . T . PASS END=211956585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,945:0,32,255:26,0 chr1 211956586 . C . PASS END=211956586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 211956587 . T . PASS END=211956587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr1 211956588 . C . PASS END=211956592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:34,0 chr1 211956593 . T . PASS END=211956593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:33,0 chr1 211956594 . G . PASS END=211956594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1227:0,34,255:33,0 chr1 211956595 . C . PASS END=211956595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 211956596 . T . PASS END=211956598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr1 211956599 . A . PASS END=211956600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:35,0 chr1 211956601 . T . PASS END=211956602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:34,0 chr1 211956603 . C . PASS END=211956605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1312:0,94,255:36,0 chr1 211956606 . T . PASS END=211956606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr1 211956607 . T . PASS END=211956607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:33,0 chr1 211956608 . T . PASS END=211956610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:34,0 chr1 211956611 . C . PASS END=211956611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 211956612 . T . PASS END=211956612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1188:0,53,255:33,0 chr1 211956613 . G . PASS END=211956618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr1 211956619 . C . PASS END=211956624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:41:0,92,1459:0,92,255:40,0 chr1 211956625 . G . PASS END=211956625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:40,0 chr1 211956626 . T . PASS END=211956636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1470:0,87,255:40,0 chr1 211956637 . T . PASS END=211956637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:32:42:0,32,1365:0,32,255:36,0 chr1 211956638 . A . PASS END=211956844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1211:0,86,255:40,0 chr1 211960974 . C . PASS END=211961069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:75:0,120,1800:0,222,255:40,0 chr1 211966414 . C . PASS END=211966532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:38:0,87,1305:0,102,255:40,0 chr1 212002401 . C . PASS END=212002401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 212002402 . T . PASS END=212002402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 212002403 . G . PASS END=212002665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:33:0,86,1218:0,86,255:40,0 chr1 212003525 . C . PASS END=212003560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr1 212003561 . G . PASS END=212003596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 212115166 . T . PASS END=212115446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:37:0,84,1260:0,84,255:40,0 chr1 212115447 . T . PASS END=212115447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1183:0,69,255:28,0 chr1 212115448 . G . PASS END=212115453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,93,255:30,0 chr1 212118126 . C . PASS END=212118129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:30,0 chr1 212118130 . T . PASS END=212118130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:29,0 chr1 212118131 . A . PASS END=212118264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1111:0,80,255:40,0 chr1 212118265 . A . PASS END=212118284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:25:0,60,900:0,60,255:26,0 chr1 212118285 . A . PASS END=212118285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 212118286 . T . PASS END=212118292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 212118293 . G . PASS END=212118311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr1 212119949 . C . PASS END=212120047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,111,1665:0,133,255:40,0 chr1 212125005 . C . PASS END=212125112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,102,1482:0,107,255:40,0 chr1 212125911 . C . PASS END=212126043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:39:0,93,1336:0,93,255:40,0 chr1 212139772 . C . PASS END=212139840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:61:0,120,1800:0,143,255:40,0 chr1 212141220 . A . PASS END=212141323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:37:0,90,1347:0,90,255:40,0 chr1 212141855 . C . PASS END=212142008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:85:32:0,85,1124:0,85,255:40,0 chr1 212142009 . T . PASS END=212142030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:96:51:0,96,1440:0,142,255:40,0 chr1 212142031 . T . PASS END=212142034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:63:51:0,63,945:0,137,255:24,0 chr1 212142035 . T . PASS END=212142036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:45:48:0,45,675:0,144,255:17,0 chr1 212142037 . G . PASS END=212142040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:30:48:0,30,450:0,128,255:12,0 chr1 212142041 . A . PASS END=212142043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:21:42:0,21,315:0,126,255:8,0 chr1 212142044 . A . PASS END=212142049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:12:33:0,12,180:0,93,255:4,0 chr1 212148508 . T . PASS END=212148714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:46:0,114,1710:0,138,255:40,0 chr1 212149924 . C . PASS END=212149929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:30,0 chr1 212149930 . G . PASS END=212149930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 212149931 . G . PASS END=212150061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:30:0,86,1147:0,86,255:40,0 chr1 212150788 . T . PASS END=212150886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:59:0,120,1800:0,154,255:40,1 chr1 212151614 . C . PASS END=212151616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 212151617 . A . PASS END=212151623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 212151624 . T . PASS END=212151624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr1 212151625 . G . PASS END=212151630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 212151631 . T . PASS END=212151631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 212151632 . G . PASS END=212151643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 212151644 . T . PASS END=212151644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,720:0,19,255:20,0 chr1 212151645 . C . PASS END=212151649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr1 212151650 . A . PASS END=212151650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 212151651 . A . PASS END=212151653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr1 212151654 . A . PASS END=212151853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1133:0,83,255:40,0 chr1 212154435 . C . PASS END=212154530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:98:37:0,98,1399:0,98,255:40,0 chr1 212154531 . A . PASS END=212154531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1297:0,68,255:36,0 chr1 212154532 . T . PASS END=212154532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1324:0,106,255:36,0 chr1 212156018 . C . PASS END=212156152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,120,1800:0,130,255:40,0 chr1 212161228 . C . PASS END=212161338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:38:0,84,1260:0,98,255:40,0 chr1 212161339 . A . PASS END=212161345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:30:0,72,1080:0,90,255:24,0 chr1 212179981 . C . PASS END=212180103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:49:0,120,1800:0,132,255:40,0 chr1 212180592 . C . PASS END=212180593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 212180594 . G . PASS END=212180603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:26,0 chr1 212180604 . A . PASS END=212180791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1015:0,84,255:40,0 chr1 212184717 . C . PASS END=212184763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:100:0,120,1800:0,250,255:40,0 chr1 212190228 . T . PASS END=212190365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,105,1575:0,123,255:40,0 chr1 212193464 . C . PASS END=212193610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:87:40:0,87,1305:0,113,255:40,0 chr1 212194063 . A . PASS END=212194096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,108,1620:0,118,255:40,0 chr1 212194425 . C . PASS END=212194554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,104,1654:0,104,255:40,0 chr1 212204248 . T . PASS END=212204253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,93,255:31,0 chr1 212204254 . A . PASS END=212204254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 212204255 . T . PASS END=212204268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1164:0,96,255:32,0 chr1 212204269 . T . PASS END=212204272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 212204273 . G . PASS END=212204273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 212204274 . T . PASS END=212204282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr1 212208686 . C . PASS END=212208746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1312:0,100,255:40,0 chr1 212208747 . T . PASS END=212208747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:37,0 chr1 212208748 . G . PASS END=212208769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1319:0,97,255:38,0 chr1 212208770 . T . PASS END=212208770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1083:0,74,255:33,0 chr1 212208771 . T . PASS END=212208779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:34,0 chr1 212209233 . A . PASS END=212209236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 212209237 . T . PASS END=212209237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 212209238 . C . PASS END=212209282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1123:0,87,255:32,0 chr1 212209283 . T . PASS END=212209284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:23,0 chr1 212216335 . G . PASS END=212216338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 212216339 . G . PASS END=212216460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:29:0,84,1260:0,87,255:40,0 chr1 212218002 . C . PASS END=212218010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1271:0,97,255:38,0 chr1 212218011 . T . PASS END=212218011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:37,0 chr1 212218012 . G . PASS END=212218015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,114,1368:0,114,255:39,0 chr1 212218016 . C . PASS END=212218100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1303:0,97,255:40,0 chr1 212220493 . A . PASS END=212220554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:33:0,85,1227:0,85,255:40,0 chr1 212220639 . G . PASS END=212220759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,105,1575:0,118,255:40,0 chr1 212236226 . C . PASS END=212236291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:46:0,116,1738:0,116,255:40,0 chr1 212238259 . A . PASS END=212238371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:46:0,105,1694:0,105,255:40,0 chr1 212240154 . G . PASS END=212240217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:45:0,114,1659:0,114,255:40,0 chr1 212240218 . C . PASS END=212240218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:73:45:0,73,1462:0,73,255:39,0 chr1 212240219 . T . PASS END=212240227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,108,1619:0,116,255:40,0 chr1 212241566 . G . PASS END=212241667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:37:0,97,1313:0,97,255:40,0 chr1 212241668 . T . PASS END=212241669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:42:0,93,1449:0,93,255:36,0 chr1 212241941 . G . PASS END=212242045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,2:95:99:57:0,120,1800:0,158,255:40,0 chr1 212245443 . T . PASS END=212245555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,132,255:40,0 chr1 212251515 . G . PASS END=212251604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:34:0,85,970:0,85,255:40,0 chr1 212253957 . A . PASS END=212254092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:34:0,99,1250:0,99,255:40,0 chr1 212273594 . T . PASS END=212273600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr1 212273601 . A . PASS END=212273601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 212273602 . A . PASS END=212273602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 212273603 . C . PASS END=212273612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,678:0,49,255:19,0 chr1 212273613 . G . PASS END=212273630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,860:0,61,255:26,0 chr1 212273631 . C . PASS END=212273638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:32,0 chr1 212273639 . C T, 148.40 PASS DP=34;MQ=249.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:98:186,101,0,1252,101,1252:255,102,0:0,0:1.4840e+02,9.8398e+01,0.0000e+00,4.5000e+02,1.3317e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,9:0,0,16,18 chr1 212273640 . A . PASS END=212273667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,982:0,85,255:34,0 chr1 212273668 . T . PASS END=212273668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:32,0 chr1 212273669 . C . PASS END=212273701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:36:0,80,1159:0,80,255:37,0 chr1 212273702 . A . LowGQ END=212273703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:0:36:0,0,504:0,0,255:28,0 chr1 212273704 . C . PASS END=212273704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:54:35:0,54,853:0,54,255:31,0 chr1 212273705 . T . PASS END=212273708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1069:0,88,255:34,0 chr1 212273709 . T . PASS END=212273709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:33,0 chr1 212273710 . C . PASS END=212273716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1130:0,88,255:34,0 chr1 212273717 . C . PASS END=212273717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr1 212273718 . A . PASS END=212273718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 212273719 . A . PASS END=212273719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1148:0,75,255:31,0 chr1 212273720 . A . PASS END=212273720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,107,255:32,0 chr1 212273721 . T . PASS END=212273721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:30,0 chr1 212273722 . A . PASS END=212273723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:33,0 chr1 212273724 . T . PASS END=212273724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1149:0,50,255:31,0 chr1 212273725 . C . PASS END=212273730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1158:0,85,255:34,0 chr1 212273731 . T . PASS END=212273731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1120:0,78,255:33,0 chr1 212273732 . T . PASS END=212273735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1288:0,94,255:36,0 chr1 212273736 . T . PASS END=212273736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1168:0,63,255:34,0 chr1 212273737 . A . PASS END=212273738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1433:0,101,255:37,0 chr1 212273739 . T . PASS END=212273739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:37,0 chr1 212273740 . A . PASS END=212273747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1264:0,84,255:37,0 chr1 212273748 . T . PASS END=212273748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:34,0 chr1 212273749 . C . PASS END=212274245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:33:0,82,1239:0,82,255:40,0 chr1 212274246 . T . PASS END=212274246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:26,0 chr1 212274247 . C . PASS END=212274247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 212274248 . C . PASS END=212274248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 212274249 . T . PASS END=212274254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 212274255 . A . PASS END=212274256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 212274257 . C . PASS END=212274257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 212274258 . T . PASS END=212274273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr1 212274274 . G . PASS END=212274274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 212274275 . A . PASS END=212274278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 212274279 . G . PASS END=212274282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 212274283 . G . PASS END=212274283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 212274284 . G . PASS END=212274285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 212274286 . A . PASS END=212274286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 212274287 . A . PASS END=212274375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1003:0,80,255:36,0 chr1 212274376 . T . PASS END=212274386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 212274387 . C . PASS END=212274412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 212274413 . A C, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,13,0:0,11,0:69:157,72,0,931,72,931:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,15:0,0,8,16 chr1 212274414 . A . PASS END=212274414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 212274415 . T . PASS END=212274415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 212274416 . T . PASS END=212274418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 212274419 . C . PASS END=212274426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 212276184 . G . PASS END=212276238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,122,255:40,0 chr1 212276239 . C . PASS END=212276275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:43:0,87,1305:0,112,255:40,0 chr1 212276276 . A G, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.374;ReadPosRankSum=0.272;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,26,0:0.619,0.000:42:7,13,0:9,13,0:45:85,0,44,927,457,1384:255,0,255:12,0:5.0000e+01,1.2684e-04,4.7170e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,11,15:10,6,16,10 chr1 212276277 . T . PASS END=212276282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1260:0,113,255:30,0 chr1 212459453 . A . PASS END=212459453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,333:0,6,255:10,0 chr1 212459454 . T . PASS END=212459454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 212459455 . G . PASS END=212459458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 212459459 . T . PASS END=212459459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 212459460 . C . PASS END=212459497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,558:0,45,255:18,0 chr1 212459498 . T . PASS END=212459498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 212459499 . C . PASS END=212459509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 212459510 . A . PASS END=212459510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 212459511 . A . PASS END=212459512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 212459513 . G . PASS END=212459526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:23,0 chr1 212459527 . C . PASS END=212459527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 212459528 . C . PASS END=212459539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr1 212459540 . C . PASS END=212459540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 212459541 . G . PASS END=212459581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,825:0,62,255:24,0 chr1 212459582 . T . PASS END=212459582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 212459583 . T . PASS END=212459584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 212459585 . C . PASS END=212459586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 212459587 . C . PASS END=212459591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 212459592 . A . PASS END=212459592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 212459593 . G . PASS END=212459600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 212459601 . A . PASS END=212459623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,630:0,45,255:19,0 chr1 212459624 . C . PASS END=212459633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 212475425 . A . PASS END=212475434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:77:0,120,1800:0,220,255:40,0 chr1 212502477 . A . PASS END=212502477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,843:0,56,255:28,0 chr1 212502478 . T . PASS END=212502482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,986:0,60,255:28,0 chr1 212502483 . C . PASS END=212502487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:28,0 chr1 212502488 . A . PASS END=212502488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1000:0,49,255:26,0 chr1 212502489 . A . PASS END=212502660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:80:30:0,80,1066:0,80,255:40,0 chr1 212502661 . T . PASS END=212502667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr1 212502668 . A . PASS END=212502671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 212502672 . T . PASS END=212502673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 212506839 . A . PASS END=212506934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,994:0,81,255:40,0 chr1 212506935 . A . PASS END=212506935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 212506936 . T . PASS END=212506939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr1 212506940 . G . PASS END=212506940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 212515530 . T . PASS END=212515575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:40:0,85,1194:0,85,255:40,0 chr1 212515576 . A . PASS END=212515612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:37:0,84,1388:0,84,255:40,0 chr1 212515613 . C T, 48.53 PASS DP=37;MQ=250.00;MQRankSum=5.135;ReadPosRankSum=2.468;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,16,0:0.432,0.000:37:8,8,0:13,8,0:47:83,0,50,564,743,1307:255,0,255:18,0:4.8528e+01,8.2577e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,14,7,9:12,9,7,9 chr1 212515614 . G . PASS END=212515619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,108,255:33,0 chr1 212515620 . C . PASS END=212515622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,75,255:27,0 chr1 212519145 . C . PASS END=212519275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:95:36:0,95,1349:0,95,255:40,0 chr1 212520689 . G . PASS END=212520748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:69:0,120,1800:0,190,255:40,0 chr1 212521731 . T . PASS END=212521839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,123,255:40,0 chr1 212522531 . C . PASS END=212522584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:73:0,120,1800:0,186,255:40,0 chr1 212529968 . G . PASS END=212530018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,165,255:40,0 chr1 212530292 . G . PASS END=212530411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:43:0,80,1380:0,80,255:40,0 chr1 212530499 . G . PASS END=212530614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:63:0,120,1800:0,130,255:40,0 chr1 212530615 . A . PASS END=212530626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:71:0,120,1800:0,197,255:40,0 chr1 212532028 . G . PASS END=212532129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:42:0,110,1565:0,110,255:40,0 chr1 212533980 . A . PASS END=212534112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:84:40:0,84,1401:0,84,255:40,1 chr1 212538557 . T . PASS END=212538709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:41:0,84,1260:0,87,255:40,0 chr1 212538710 . A . PASS END=212538718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:36:0,72,1080:0,75,255:25,0 chr1 212548535 . A . PASS END=212548642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:55:0,120,1800:0,154,255:40,0 chr1 212550904 . C . PASS END=212551018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1203:0,81,255:40,0 chr1 212551019 . C . PASS END=212551021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,91,255:26,0 chr1 212551022 . G . PASS END=212551022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 212551023 . C . PASS END=212551026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:35:0,78,1170:0,88,255:26,0 chr1 212551027 . C . PASS END=212551027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 212551028 . A . PASS END=212551029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 212551030 . G . PASS END=212551038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:28:0,42,630:0,71,255:18,0 chr1 212551039 . C . PASS END=212551045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,40,255:13,0 chr1 212551046 . G . PASS END=212551048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 212553237 . C . PASS END=212553260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,748:0,66,255:26,0 chr1 212553261 . G . PASS END=212553266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,970:0,81,255:31,0 chr1 212553267 . A . PASS END=212553267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 212553268 . G . PASS END=212553277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1194:0,96,255:35,0 chr1 212553278 . A . PASS END=212553278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr1 212553279 . A . PASS END=212553367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1349:0,85,255:40,0 chr1 212553368 . C . PASS END=212553368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr1 212553369 . A . PASS END=212553379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1186:0,86,255:32,0 chr1 212558616 . C . PASS END=212558635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,917:0,62,255:26,0 chr1 212558636 . G . PASS END=212558666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1023:0,80,255:34,0 chr1 212558667 . A . PASS END=212558667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr1 212558668 . T . PASS END=212558697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1266:0,91,255:38,0 chr1 212558698 . A . PASS END=212558698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1325:0,70,255:36,0 chr1 212558699 . G . PASS END=212558753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1215:0,84,255:40,0 chr1 212558754 . G . PASS END=212558754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr1 212558755 . T . PASS END=212558757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1215:0,104,255:27,0 chr1 212558758 . A . PASS END=212558759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 212558760 . G . PASS END=212558767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 212560233 . C . PASS END=212560289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:97:35:0,97,1193:0,97,255:40,0 chr1 212560290 . G . PASS END=212560326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,119,1635:0,119,255:40,0 chr1 212560327 . A G, 179.43 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,17,0:0,27,0:129:217,132,0,1698,132,1698:255,132,0:0,0:1.7943e+02,1.2943e+02,0.0000e+00,4.5000e+02,1.6420e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,23:0,0,18,26 chr1 212560328 . A . PASS END=212560364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,110,1496:0,110,255:40,0 chr1 212560365 . T . PASS END=212560431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1047:0,84,255:38,0 chr1 212560432 . G . PASS END=212560442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,67,255:23,0 chr1 212583767 . C . PASS END=212583777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1118:0,89,255:38,0 chr1 212583778 . C . PASS END=212583778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,0 chr1 212583779 . C . PASS END=212583860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1197:0,85,255:40,0 chr1 212583861 . C . PASS END=212583863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,83,255:26,0 chr1 212587240 . C . PASS END=212587244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr1 212587245 . A . PASS END=212587245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 212587246 . C . PASS END=212587254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 212587255 . T . PASS END=212587257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 212587258 . G . PASS END=212587261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 212587262 . A . PASS END=212587262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 212587263 . A . PASS END=212587265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 212587266 . A . PASS END=212587266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr1 212587267 . G . PASS END=212587270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr1 212587271 . G . PASS END=212587276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,964:0,81,255:30,0 chr1 212587277 . T . PASS END=212587277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 212587278 . G . PASS END=212587283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 212587284 . G . PASS END=212587284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 212587285 . C . PASS END=212587302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1164:0,83,255:29,0 chr1 212587303 . C . PASS END=212587303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 212587304 . C . PASS END=212587305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 212587306 . A . PASS END=212587306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:27,0 chr1 212587307 . A . PASS END=212587319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,86,255:29,0 chr1 212587320 . T . PASS END=212587320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 212587321 . T . PASS END=212587357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1177:0,80,255:32,0 chr1 212587358 . T . PASS END=212587358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:28,0 chr1 212587359 . T . PASS END=212587366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:32,0 chr1 212587367 . A . PASS END=212587367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:29,0 chr1 212587368 . C . PASS END=212587387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1149:0,82,255:34,0 chr1 212587388 . C . PASS END=212587388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr1 212587389 . A . PASS END=212587395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,1127:0,85,255:29,0 chr1 212587396 . G . PASS END=212587397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 212587398 . T . PASS END=212587399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 212587400 . G . PASS END=212587401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 212587402 . A . PASS END=212587407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 212587408 . C . PASS END=212587408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 212587409 . G . PASS END=212587411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 212587412 . G . PASS END=212587417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,926:0,70,255:26,0 chr1 212587418 . A . PASS END=212587418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:23,0 chr1 212587419 . C . PASS END=212587422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1008:0,68,255:26,0 chr1 212587423 . C . PASS END=212587424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 212587425 . G . PASS END=212587427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 212587428 . G . PASS END=212587430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:29,0 chr1 212587431 . C . PASS END=212587438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:29:0,76,1049:0,76,255:26,0 chr1 212587439 . A . PASS END=212587441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 212587442 . A . PASS END=212587442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 212587443 . G . PASS END=212587445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 212587446 . A . PASS END=212587469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,915:0,64,255:26,0 chr1 212587470 . T . PASS END=212587470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr1 212587471 . C . PASS END=212587487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:26,0 chr1 212587488 . C . PASS END=212587506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,631:0,43,255:19,0 chr1 212587507 . G . PASS END=212587508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 212587509 . A . PASS END=212587511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr1 212587512 . G . PASS END=212587522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:30:18:0,30,450:0,37,255:11,0 chr1 212587523 . G . PASS END=212587530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 212588064 . C . PASS END=212588067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 212588068 . T . PASS END=212588068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,833:0,44,255:22,0 chr1 212588069 . G . PASS END=212588080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,68,255:26,0 chr1 212588081 . A . PASS END=212588081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,908:0,37,255:25,0 chr1 212588082 . G . PASS END=212588099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:26,0 chr1 212606286 . A . LowDepth;LowGQ END=212606332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 212606333 . G . PASS END=212606352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 212606353 . C . PASS END=212606361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 212606362 . T . LowGQ END=212606363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:8:0,0,255:0,0,255:10,0 chr1 212606364 . C . PASS END=212606365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 212606366 . C . PASS END=212606366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 212606367 . A . PASS END=212606368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 212606369 . A . PASS END=212606369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 212606370 . G . PASS END=212606374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 212606375 . G . LowGQ END=212606376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:12,0 chr1 212606377 . C . PASS END=212606378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 212606379 . G . PASS END=212606386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:16,0 chr1 212606387 . A . PASS END=212606387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 212606388 . C . PASS END=212606388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 212606389 . C . PASS END=212606390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 212606391 . C . PASS END=212606393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr1 212606394 . C . PASS END=212606394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr1 212606395 . C . PASS END=212606406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,659:0,41,255:18,0 chr1 212606407 . G . PASS END=212606408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 212606409 . C . PASS END=212606409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 212606410 . C . PASS END=212606411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 212606412 . C . PASS END=212606413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 212606414 . A . PASS END=212606416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 212606417 . G . PASS END=212606444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,639:0,41,255:19,0 chr1 212606445 . C . PASS END=212606446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 212606447 . C . PASS END=212606447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:17,0 chr1 212606448 . T . PASS END=212606453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr1 212606454 . G . PASS END=212606454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 212606455 . G . PASS END=212606461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr1 212606462 . G . PASS END=212606462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 212615907 . G . PASS END=212615912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,128,255:40,0 chr1 212615913 . C . PASS END=212615967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:48:0,100,1607:0,100,255:40,0 chr1 212617681 . A . PASS END=212617692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1235:0,91,255:36,0 chr1 212617693 . G . PASS END=212617693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr1 212617694 . A . PASS END=212617770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,99,1421:0,99,255:40,0 chr1 212617771 . T . PASS END=212617784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:88:40:0,88,1449:0,88,255:38,0 chr1 212619172 . A . PASS END=212619301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:34:0,101,1202:0,101,255:40,0 chr1 212619302 . T . PASS END=212619324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1250:0,81,255:35,0 chr1 212619325 . T . PASS END=212619325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:29,0 chr1 212619326 . T . PASS END=212619333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 212619334 . A . PASS END=212619338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr1 212619339 . T C, 140.30 PASS DP=31;MQ=245.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,16,0:0,15,0:90:178,93,0,1202,93,1202:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,19:0,0,15,16 chr1 212619340 . G . PASS END=212619343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:23,0 chr1 212619344 . T . PASS END=212619348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 212782257 . C . PASS END=212782264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,900:0,61,255:26,0 chr1 212782265 . G . PASS END=212782265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 212782266 . C . PASS END=212782266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:29,0 chr1 212782267 . C . PASS END=212782272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 212788360 . C . PASS END=212788362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 212788363 . A . PASS END=212788363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:29,0 chr1 212788364 . A . PASS END=212788544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1063:0,90,255:40,0 chr1 212788545 . C . PASS END=212788558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,80,255:26,0 chr1 212788559 . A . PASS END=212788559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:19,0 chr1 212788560 . C . PASS END=212788562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 212788563 . T . PASS END=212788572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:22:0,42,630:0,44,255:19,0 chr1 212788573 . A . PASS END=212788603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:12,0 chr1 212791469 . G . PASS END=212791576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,131,255:40,0 chr1 212792388 . C . PASS END=212792447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,108,1620:0,112,255:40,0 chr1 212792700 . G . PASS END=212792708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 212792709 . A . PASS END=212792709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 212792710 . A . PASS END=212792724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:24,0 chr1 212792725 . A . PASS END=212792736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 212792737 . A . PASS END=212792737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 212792738 . G . PASS END=212792886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1260:0,84,255:40,0 chr1 212792887 . T . PASS END=212792887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 212792888 . G . PASS END=212792897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 212798220 . A . PASS END=212798220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 212798221 . T . PASS END=212798221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 212798222 . G . PASS END=212798242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:23,0 chr1 212798243 . G . PASS END=212798243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 212798244 . T . PASS END=212798244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 212798245 . A . PASS END=212798251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 212798252 . G . PASS END=212798252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 212798253 . G . PASS END=212798551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1172:0,83,255:40,0 chr1 212798552 . G . PASS END=212798552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 212798553 . G . PASS END=212798590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:31:0,83,1156:0,83,255:35,0 chr1 212798591 . G . PASS END=212798591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr1 212798592 . A . PASS END=212798626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1194:0,86,255:35,0 chr1 212798627 . A . PASS END=212798627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:34,0 chr1 212798628 . C . PASS END=212799051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,966:0,81,255:40,0 chr1 212799052 . C . PASS END=212799052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr1 212799053 . A . PASS END=212799062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 212799063 . G . PASS END=212799064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 212799065 . G . PASS END=212799066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 212799067 . C . PASS END=212799079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:26,0 chr1 212799080 . A . PASS END=212799080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr1 212799081 . G . PASS END=212799088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,906:0,62,255:24,0 chr1 212799089 . C . PASS END=212799093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,59,255:19,0 chr1 212799094 . T . PASS END=212799102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:21,0 chr1 212799103 . C . PASS END=212799103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 212799104 . C . PASS END=212799109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 212799110 . T . PASS END=212799110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 212799111 . G . PASS END=212799111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 212799112 . T . PASS END=212799112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 212799113 . G . PASS END=212799120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 212799121 . C . PASS END=212799121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 212799122 . C . PASS END=212799122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 212799123 . A . PASS END=212799123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 212799124 . A . PASS END=212799124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 212799125 . T . PASS END=212799125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 212799126 . T . PASS END=212799128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 212799129 . G . PASS END=212799129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 212799130 . C . PASS END=212799130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 212799131 . C . PASS END=212799131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 212799132 . C . PASS END=212799132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 212799133 . C . PASS END=212799134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,703:0,30,255:20,0 chr1 212799135 . G . PASS END=212799136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 212799137 . A . PASS END=212799137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 212799138 . C . PASS END=212799143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 212799144 . A . PASS END=212799154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr1 212799155 . A . PASS END=212799155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:16,0 chr1 212799156 . G . PASS END=212799179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,629:0,44,255:19,0 chr1 212799180 . G . PASS END=212799180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 212799181 . G . PASS END=212799200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr1 212799201 . G . PASS END=212799202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 212799203 . C . PASS END=212799204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 212799205 . T . PASS END=212799209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 212799210 . G . PASS END=212799210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 212799211 . G . PASS END=212799232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:22,0 chr1 212799233 . C . PASS END=212799234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 212799235 . G . PASS END=212799240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:21,0 chr1 212799241 . A . PASS END=212799241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,817:0,39,255:20,0 chr1 212799242 . G . PASS END=212799245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr1 212799246 . G . PASS END=212799247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:21,0 chr1 212799248 . T . PASS END=212799249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 212799250 . T . PASS END=212799250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 212799251 . G . PASS END=212799264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 212799265 . G . PASS END=212799265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 212799266 . C . PASS END=212799266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:21,0 chr1 212799267 . A . PASS END=212799267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 212799268 . A . PASS END=212799269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 212799270 . T . PASS END=212799272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr1 212799273 . T . PASS END=212799275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 212799276 . G . PASS END=212799300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,893:0,65,255:26,0 chr1 212799301 . G . PASS END=212799301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:25,0 chr1 212799302 . C . PASS END=212799302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 212799303 . C . PASS END=212799316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:27:0,81,1002:0,81,255:33,0 chr1 212799317 . C . PASS END=212799317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:30,0 chr1 212799318 . A . PASS END=212799731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:30:0,81,1139:0,90,255:40,0 chr1 212799732 . T . PASS END=212799732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr1 212799733 . C . PASS END=212799735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 212799736 . A . PASS END=212799736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 212799737 . C . PASS END=212799739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 212799740 . A . PASS END=212799740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,937:0,79,255:29,0 chr1 212799741 . T . PASS END=212799767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:31,0 chr1 212799768 . T . PASS END=212799768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 212799769 . C . PASS END=212799778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 212799779 . C . PASS END=212799779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 212799780 . A . PASS END=212799780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 212799781 . A . PASS END=212799782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 212799783 . G . PASS END=212799832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1163:0,80,255:36,0 chr1 212799833 . T . PASS END=212799838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1136:0,88,255:35,0 chr1 212799839 . A . PASS END=212799839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:33,0 chr1 212799840 . G . PASS END=212799869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1135:0,85,255:34,0 chr1 212799870 . A G, 148.39 PASS DP=34;MQ=249.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:98:186,101,0,1260,101,1260:255,102,0:0,0:1.4839e+02,9.8388e+01,0.0000e+00,4.5000e+02,1.3316e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,23:0,0,13,21 chr1 212799871 . A . PASS END=212799918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1194:0,83,255:38,0 chr1 212799919 . A . PASS END=212799919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr1 212799920 . G . PASS END=212799947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1194:0,86,255:36,0 chr1 212799948 . A . PASS END=212799948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1123:0,55,255:29,0 chr1 212799949 . C T, 149.31 PASS DP=34;MQ=249.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:99:187,102,0,287,287,287:255,102,0:0,0:1.4931e+02,9.9315e+01,0.0000e+00,2.8408e+02,3.1885e+02,2.8709e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,15,19:0,0,12,22 chr1 212799950 . G . PASS END=212799975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1119:0,80,255:33,0 chr1 212799976 . T . PASS END=212799976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 212799977 . G . PASS END=212799978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 212799979 . A . PASS END=212799986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1000:0,70,255:27,0 chr1 212799987 . A . PASS END=212800002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,884:0,61,255:24,0 chr1 212800003 . A . PASS END=212800003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 212800004 . A . PASS END=212800004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 212860133 . T . PASS END=212860133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 212860134 . C . PASS END=212860158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,854:0,61,255:26,0 chr1 212860159 . G . PASS END=212860159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 212860160 . G . PASS END=212860167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 212860168 . G . PASS END=212860180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 212860181 . C . PASS END=212860181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 212860182 . A . PASS END=212860184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 212860185 . A . PASS END=212860189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:73:27:0,73,1033:0,73,255:27,0 chr1 212860190 . C . PASS END=212860200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 212860201 . G . PASS END=212860201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 212860202 . C . PASS END=212860210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1163:0,90,255:30,0 chr1 212860211 . G . PASS END=212860211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 212860212 . C . PASS END=212860216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 212860217 . C . PASS END=212860219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 212860220 . C . PASS END=212860220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 212860221 . T . PASS END=212860221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:29,0 chr1 212860222 . C . PASS END=212860223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 212860224 . T . PASS END=212860226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 212860227 . T . PASS END=212860237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1172:0,93,255:31,0 chr1 212860238 . C . PASS END=212860238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 212860239 . T . PASS END=212860274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1178:0,83,255:32,0 chr1 212860275 . A . PASS END=212860276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 212860277 . C . PASS END=212860277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 212860278 . T . PASS END=212860297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,962:0,70,255:26,0 chr1 212860298 . T . PASS END=212860299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,785:0,44,255:22,0 chr1 212860300 . C . PASS END=212860321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 212869033 . T . PASS END=212869034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 212869035 . A . PASS END=212869054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,899:0,66,255:25,0 chr1 212869055 . A . PASS END=212869055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 212869056 . G . PASS END=212869056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 212869057 . A . PASS END=212869057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 212869058 . C . PASS END=212869073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:31,0 chr1 212869074 . T . PASS END=212869074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 212869075 . G . PASS END=212869238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:32:0,82,1210:0,82,255:40,0 chr1 212869239 . T . PASS END=212869239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:32,0 chr1 212869240 . G . PASS END=212869252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,92,255:33,0 chr1 212869253 . A . PASS END=212869254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:25,0 chr1 212870303 . C . PASS END=212870407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,137,255:40,0 chr1 212873015 . C . PASS END=212873021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 212873022 . T . PASS END=212873022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 212873023 . G . PASS END=212873054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr1 212873055 . G . PASS END=212873055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 212873056 . C . PASS END=212873057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 212873058 . A . PASS END=212873058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 212873059 . C . PASS END=212873060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 212873061 . C . PASS END=212873062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 212873063 . C . PASS END=212873088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:10:5:0,10,180:0,10,172:6,0 chr1 212873089 . G . PASS END=212873091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr1 212873092 . G . PASS END=212873104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,94:2,0 chr1 212900484 . C . PASS END=212900486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1233:0,99,255:35,0 chr1 212900487 . A G, 151.88 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,19,0:0,16,0:102:190,105,0,1323,105,1323:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,13:0,0,20,15 chr1 212900488 . A . PASS END=212900521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1272:0,89,255:36,0 chr1 212911750 . T . PASS END=212911798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:45:0,87,1765:0,87,255:40,0 chr1 212911799 . T . PASS END=212911835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,158,255:40,0 chr1 212911836 . T C, 49.81 PASS DP=60;MQ=249.21;MQRankSum=6.110;ReadPosRankSum=4.986;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,28,0:0.475,0.000:59:11,14,0:20,14,0:48:85,0,50,1001,1056,2057:255,0,255:28,0:4.9808e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,20,14,14:19,12,16,12 chr1 212911837 . G . PASS END=212911873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,149,255:40,0 chr1 212911874 . G . PASS END=212911936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:40:0,88,1480:0,88,255:40,0 chr1 212911937 . A . PASS END=212911937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:34,0 chr1 212911938 . C . PASS END=212911963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,94,255:35,0 chr1 212911964 . A . PASS END=212911999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 212912000 . T . PASS END=212912000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:19,0 chr1 212912001 . C . PASS END=212912013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 212912014 . T . PASS END=212912022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:19,0 chr1 212912023 . C . PASS END=212912028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr1 212912876 . C . PASS END=212912943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,118,1800:0,118,255:40,0 chr1 212939531 . C . PASS END=212939615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,148,255:40,0 chr1 212955714 . C . PASS END=212955768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:62:0,120,1800:0,159,255:40,0 chr1 212957705 . C . PASS END=212957835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:43:0,80,1449:0,80,255:40,0 chr1 212960901 . C . PASS END=212960903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 212960904 . T . PASS END=212960979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,102,1755:0,102,255:40,0 chr1 212964872 . C . PASS END=212964884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 212964885 . C . PASS END=212964886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 212964887 . C . PASS END=212964889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 212964890 . A . PASS END=212964890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 212964891 . G . PASS END=212964973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:18,0 chr1 212964974 . C . PASS END=212965019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,390:0,36,255:13,0 chr1 212965020 . G . PASS END=212965022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 212965023 . A . PASS END=212965024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:16:11:0,16,270:0,16,255:7,0 chr1 212965025 . C . LowGQ END=212965025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:6,0 chr1 212965026 . A . PASS END=212965036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:8:0,11,180:0,11,227:6,0 chr1 212965037 . C . PASS END=212965039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 212965040 . T . PASS END=212965040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 212965041 . G . PASS END=212965053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 212965054 . G . PASS END=212965077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 212965078 . G . PASS END=212965105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:8,0 chr1 212965264 . A . PASS END=212965266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 212965267 . C . PASS END=212965283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:25,0 chr1 212965284 . C G, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=1.278;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,13,0:0.520,0.000:25:11,6,0:1,7,0:48:85,0,50,465,429,894:255,0,255:12,0:5.0000e+01,6.5492e-05,5.2916e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,7,6:4,8,4,9 chr1 212965285 . T . PASS END=212965292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr1 212965293 . C . PASS END=212965299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:28,0 chr1 212965300 . T . PASS END=212965304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 212965305 . C . PASS END=212965308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 212965309 . T . PASS END=212965310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 212965311 . C . PASS END=212965311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 212965312 . G . PASS END=212965312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:26,0 chr1 212965313 . C . PASS END=212965314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 212965315 . C . PASS END=212965321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1061:0,71,255:26,0 chr1 212965322 . T . PASS END=212965329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 212968088 . A . PASS END=212968150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,139,255:40,0 chr1 212968437 . G . PASS END=212968469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:90:0,120,1800:0,201,255:40,0 chr1 212969859 . G . PASS END=212969893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,117,1787:0,117,255:40,0 chr1 212969894 . T . PASS END=212969932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,147,255:40,0 chr1 212970454 . G . PASS END=212970476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,150,255:40,0 chr1 212970477 . G . PASS END=212970552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:42:0,81,1215:0,113,255:40,0 chr1 212970553 . A . PASS END=212970555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,94,255:26,0 chr1 212970556 . C . PASS END=212970558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 212970559 . G . PASS END=212970561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 212970562 . C . PASS END=212970568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 212976043 . G . PASS END=212976105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,116,1800:0,116,255:40,0 chr1 212977662 . G . PASS END=212977677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,136,255:40,0 chr1 212977678 . C . PASS END=212977775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,158,255:40,0 chr1 212977938 . A . PASS END=212977993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,120,1800:0,134,255:40,0 chr1 212981078 . G . PASS END=212981176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,105,1575:0,116,255:40,0 chr1 212981177 . T . PASS END=212981187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:35,0 chr1 212981188 . C . PASS END=212981190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 212985569 . C . PASS END=212985591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,136,255:40,0 chr1 212985592 . G A, 41.64 PASS DP=52;MQ=250.00;MQRankSum=5.876;ReadPosRankSum=1.702;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,18,0:0.346,0.000:52:16,10,0:18,8,0:41:76,0,50,639,1200,1839:255,0,255:32,0:4.1643e+01,3.1919e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,16,10,8:14,20,12,6 chr1 212985593 . C . PASS END=212985629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,127,255:40,0 chr1 212985630 . G . PASS END=212985670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:39:0,84,1260:0,84,255:40,0 chr1 212988355 . G . PASS END=212988498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:31:0,83,1157:0,83,255:40,0 chr1 213003584 . T . PASS END=213003603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,152,255:40,0 chr1 213009215 . T . PASS END=213009224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 213009225 . A . PASS END=213009233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:12,0 chr1 213009234 . T . PASS END=213009234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 213009235 . C . PASS END=213009247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 213009248 . C . PASS END=213009337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:19,0 chr1 213009338 . G . PASS END=213009344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 213009345 . C . PASS END=213009347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 213009348 . C . PASS END=213009389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,739:0,63,255:23,0 chr1 213009390 . C . PASS END=213009474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,615:0,41,255:19,0 chr1 213009475 . C . PASS END=213009486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,450:0,36,255:12,0 chr1 213009487 . G . PASS END=213009491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 213031614 . A . PASS END=213031614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 213031627 . C . PASS END=213031627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 213031629 . G . PASS END=213031629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 213031638 . G . PASS END=213031638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr1 213031641 . G . PASS END=213031641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 213031691 . G . PASS END=213031691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 213031759 . G . PASS END=213031759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 213031788 . C . PASS END=213031788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 213031795 . A . PASS END=213031795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:25,0 chr1 213031796 . T . PASS END=213031800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr1 213031801 . C . PASS END=213031801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 213031802 . G . PASS END=213031818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,990:0,68,255:26,0 chr1 213031819 . G . PASS END=213031819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 213031820 . G . PASS END=213031823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 213031824 . G . PASS END=213031824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 213031825 . G . PASS END=213031835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 213031836 . C . PASS END=213031836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 213031837 . G . PASS END=213031841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 213031842 . C . PASS END=213031842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 213031843 . C . PASS END=213031848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 213031849 . G . PASS END=213031852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr1 213031853 . A . PASS END=213031853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,677:0,27,255:16,0 chr1 213031854 . A . PASS END=213031866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,720:0,47,255:18,0 chr1 213031867 . T . PASS END=213031867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 213031868 . T . PASS END=213031878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 213031879 . G . PASS END=213031910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr1 213031911 . G . PASS END=213031919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 213031920 . C . PASS END=213031941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,47,255:19,0 chr1 213031942 . A . PASS END=213031947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 213031948 . G C, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=2.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,9,0:0.600,0.000:15:3,6,0:3,3,0:48:85,0,48,314,180,494:255,0,165:4,0:5.0000e+01,7.4293e-05,5.1476e+01,3.1395e+02,2.1434e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,3,6:3,3,2,7 chr1 213031949 . C . PASS END=213031950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 213031951 . C . PASS END=213031982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 213031983 . T . PASS END=213031983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr1 213031984 . C . PASS END=213031985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 213031986 . G . PASS END=213032008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr1 213032009 . C . PASS END=213032009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 213032010 . C . PASS END=213032017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:16,0 chr1 213032018 . A . PASS END=213032018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 213032019 . G . PASS END=213032061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:19,0 chr1 213032062 . A . PASS END=213032062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,529:0,24,255:17,0 chr1 213032063 . C . PASS END=213032063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 213032064 . C . PASS END=213032064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,582:0,10,255:17,0 chr1 213032065 . C . PASS END=213032075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,684:0,57,255:19,0 chr1 213032076 . G . PASS END=213032076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr1 213032077 . A . PASS END=213032082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 213032083 . C . PASS END=213032084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 213032085 . G . PASS END=213032085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 213032086 . C . PASS END=213032092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 213032093 . T . PASS END=213032093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr1 213032094 . T . PASS END=213032094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213032095 . A . PASS END=213032095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:18,0 chr1 213032096 . C . PASS END=213032100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 213032101 . C . PASS END=213032105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213032106 . C . PASS END=213032106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 213032107 . C . PASS END=213032119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 213032120 . T . PASS END=213032120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 213032121 . G . PASS END=213032126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 213032127 . C . PASS END=213032129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,820:0,53,255:21,0 chr1 213032130 . G . PASS END=213032131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 213032132 . T . PASS END=213032132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr1 213032133 . C . PASS END=213032134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 213032135 . T . PASS END=213032135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 213032136 . C . PASS END=213032151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 213032152 . G . PASS END=213032152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 213032153 . T . PASS END=213032167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 213032168 . G . PASS END=213032168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr1 213032169 . G . PASS END=213032169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 213032170 . A . PASS END=213032181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 213032182 . A . PASS END=213032182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 213032183 . T . PASS END=213032185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,876:0,72,255:24,0 chr1 213032186 . T . PASS END=213032186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 213032187 . T . PASS END=213032188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 213032189 . G . PASS END=213032189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 213032190 . C . PASS END=213032190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 213032191 . A . PASS END=213032192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 213032193 . C . PASS END=213032193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,796:0,39,255:21,0 chr1 213032194 . G . PASS END=213032194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 213032195 . T . PASS END=213032195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 213032196 . C . PASS END=213032196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 213032197 . T . PASS END=213032197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 213032198 . T . PASS END=213032198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 213032199 . C . PASS END=213032211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 213032212 . G . PASS END=213032263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,47,255:19,0 chr1 213032264 . A . PASS END=213032266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213032267 . T . PASS END=213032268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 213032269 . C . PASS END=213032269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 213032270 . C . PASS END=213032298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,46,255:18,0 chr1 213032299 . G . PASS END=213032299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr1 213032300 . A . PASS END=213032301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr1 213032302 . A . PASS END=213032302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 213032303 . C . PASS END=213032303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 213032304 . C . PASS END=213032309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 213032310 . C . PASS END=213032310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 213032311 . C . PASS END=213032311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 213032312 . T . PASS END=213032312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 213032313 . G . PASS END=213032315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 213032316 . G . PASS END=213032316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 213032317 . C . PASS END=213032318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 213032319 . C . PASS END=213032322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 213032323 . G . PASS END=213032324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 213032325 . C . PASS END=213032325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 213032326 . C . PASS END=213032334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 213032335 . T . PASS END=213032340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 213032341 . C . PASS END=213032341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 213032342 . T . PASS END=213032342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 213032343 . C . PASS END=213032351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 213032352 . G . PASS END=213032352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 213032353 . G . PASS END=213032354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 213032355 . T . PASS END=213032355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 213032356 . G . PASS END=213032375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr1 213032376 . T . PASS END=213032376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 213032377 . G . PASS END=213032427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr1 213032428 . G . PASS END=213032429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 213032430 . G . PASS END=213032430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 213032431 . G . PASS END=213032440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:29,0 chr1 213032441 . T . PASS END=213032441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 213032442 . C . PASS END=213032456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1155:0,90,255:30,0 chr1 213032457 . C . PASS END=213032457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 213032458 . T . PASS END=213032470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 213032471 . C . PASS END=213032473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 213032474 . T . PASS END=213032493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:28,0 chr1 213032494 . G . PASS END=213032494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 213032495 . T . PASS END=213032495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,766:0,33,255:23,0 chr1 213032496 . G . PASS END=213032516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,842:0,64,255:25,0 chr1 213032517 . C . PASS END=213032525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:24:0,44,855:0,44,255:19,0 chr1 213032526 . C . PASS END=213032530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,756:0,66,255:22,0 chr1 213032531 . A . PASS END=213032531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 213032532 . G . PASS END=213032532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 213032541 . T . PASS END=213032541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:16,0 chr1 213037067 . C . PASS END=213037203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:31:0,89,1141:0,89,255:40,0 chr1 213037204 . A . PASS END=213037204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 213037205 . G . PASS END=213037211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1270:0,89,255:35,0 chr1 213037735 . G . PASS END=213037746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:25,0 chr1 213037747 . A . PASS END=213037758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:30,0 chr1 213037759 . C . PASS END=213037759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 213037760 . A . PASS END=213037832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1155:0,80,255:38,0 chr1 213037833 . A . PASS END=213037861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,65,255:26,0 chr1 213043396 . G . PASS END=213043483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:88:71:0,88,1800:0,88,255:40,0 chr1 213046020 . C . PASS END=213046160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,105,1575:0,127,255:40,0 chr1 213056713 . G . PASS END=213056780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:87:0,120,1800:0,255,255:40,0 chr1 213056785 . G . PASS END=213056785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,255,255:40,0 chr1 213058634 . G . PASS END=213058738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,142,255:40,0 chr1 213061233 . A . PASS END=213061324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:69:0,120,1800:0,207,255:40,0 chr1 213061325 . T . PASS END=213061343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:82:0,120,1800:0,233,255:40,0 chr1 213061831 . C . PASS END=213061923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:38:0,87,1305:0,93,255:40,0 chr1 213061924 . T . PASS END=213061936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,78,255:26,0 chr1 213062488 . A . PASS END=213062599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:49:0,117,1755:0,120,255:40,0 chr1 213062612 . G . PASS END=213062612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 213068328 . C . PASS END=213068366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:90:0,120,1800:0,254,255:40,0 chr1 213068367 . T . PASS END=213068395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:84:0,120,1800:0,222,255:40,0 chr1 213068558 . A . PASS END=213068594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,171,255:40,0 chr1 213068595 . C T, 47.42 PASS DP=79;MQ=250.00;MQRankSum=7.437;ReadPosRankSum=3.013;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,32,0:0.416,0.000:77:22,16,0:23,16,0:46:82,0,50,1092,1602,2693:255,0,255:40,0:4.7424e+01,1.0044e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,22,17,15:20,25,19,13 chr1 213068596 . G . PASS END=213068632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,210,255:40,0 chr1 213068640 . G . PASS END=213068640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr1 213068664 . T . PASS END=213068664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr1 213068746 . C . PASS END=213068746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 213068755 . T . PASS END=213068755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 213068958 . T . PASS END=213068958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 213068976 . T . PASS END=213068976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 213069016 . T . PASS END=213069016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 213069054 . G . PASS END=213069054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 213069201 . C . PASS END=213069201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 213069289 . A . PASS END=213069289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,105,1575:0,132,255:35,0 chr1 213069297 . C . PASS END=213069297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 213069372 . T . PASS END=213069372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:42:0,88,1543:0,88,255:38,0 chr1 213069417 . C . PASS END=213069417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 213069469 . A . PASS END=213069469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:57:46:0,57,855:0,121,255:18,1 chr1 213069471 . T . PASS END=213069471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:54:44:0,54,810:0,101,255:17,0 chr1 213069474 . CTT CT,C, 50.00 PASS DP=41;MQ=249.74;MQRankSum=4.845;ReadPosRankSum=1.560;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,22,2,0:0.550,0.050,0.000:40:6,12,1,0:10,10,1,0:48:60,0,50,158,336,208,142,313,501,450:255,0,255:14,34:5.0000e+01,6.3939e-05,5.3283e+01,1.5770e+02,3.4589e+02,2.1070e+02,1.6631e+02,3.4791e+02,4.5000e+02,4.5000e+02:0.00,10.00,13.00,10.00,20.00,13.00,34.77,44.77,44.77,37.77:14,2,14,10:6,10,13,11 chr1 213069479 . T . PASS END=213069479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 213069555 . T . PASS END=213069555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 213069653 . A . PASS END=213069653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr1 213069806 . C . PASS END=213069806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 213069878 . T . PASS END=213069878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 213071003 . A . PASS END=213071003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 213071041 . C . PASS END=213071041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213071112 . T . PASS END=213071112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 213071127 . C . PASS END=213071127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 213071223 . G . PASS END=213071223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 213071302 . C . PASS END=213071302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 213071336 . T . PASS END=213071336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 213071581 . G . PASS END=213071581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 213071586 . T . PASS END=213071586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 213071758 . C . PASS END=213071758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:60:43:0,60,900:0,129,255:20,0 chr1 213071761 . A ATAAT, 49.13 PASS DP=41;MQ=249.62;MQRankSum=5.369;ReadPosRankSum=-0.014;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,18,0:0.450,0.000:40:7,9,0:15,9,0:48:78,0,50,756,1676,2431:255,0,255:19,18:4.9125e+01,7.4811e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:11,11,13,5:10,12,6,12 chr1 213071858 . T . PASS END=213071858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1275:0,97,255:35,0 chr1 213071860 . T . PASS END=213071860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1351:0,83,255:35,0 chr1 213071892 . T . PASS END=213071892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 213071969 . G . PASS END=213071969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,240,255:40,0 chr1 213072230 . G . PASS END=213072230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 213072371 . G . PASS END=213072371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 213072388 . C . PASS END=213072388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr1 213123502 . A . PASS END=213123502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 213123503 . T . PASS END=213123507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 213123508 . A . PASS END=213123508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,619:0,19,255:19,0 chr1 213123509 . A . PASS END=213123509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:20,0 chr1 213123510 . C . PASS END=213123510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,662:0,36,255:20,0 chr1 213123511 . T . PASS END=213123513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 213123514 . T . PASS END=213123514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 213123515 . C . PASS END=213123516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,811:0,72,255:24,0 chr1 213123517 . T . PASS END=213123517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 213123518 . C . PASS END=213123531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr1 213123532 . G . PASS END=213123538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr1 213123539 . G . PASS END=213123539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 213123540 . T . PASS END=213123542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 213123543 . C . PASS END=213123543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 213123544 . C . PASS END=213123552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 213123553 . T . PASS END=213123553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 213123554 . C . PASS END=213123558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 213123559 . A . PASS END=213123559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 213123560 . A . PASS END=213123571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1074:0,90,255:30,0 chr1 213123572 . T . PASS END=213123572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 213123573 . G . PASS END=213123577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 213123578 . A . PASS END=213123578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:28,0 chr1 213123579 . C . PASS END=213123583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 213123584 . T . PASS END=213123584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 213123585 . G . PASS END=213123585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 213123586 . C . PASS END=213123586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 213123587 . T . PASS END=213123588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 213123589 . C . PASS END=213123589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 213123590 . C . PASS END=213123594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 213123595 . G . PASS END=213123611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,71,255:26,0 chr1 213123612 . T . PASS END=213123618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 213123619 . T . PASS END=213123621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 213123622 . C . PASS END=213123622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 213123623 . C . PASS END=213123632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,930:0,62,255:25,0 chr1 213123633 . A . PASS END=213123633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 213123634 . C . PASS END=213123642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,945:0,65,255:23,0 chr1 213123643 . A . PASS END=213123643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,821:0,48,255:21,0 chr1 213123644 . C . PASS END=213123651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1006:0,68,255:26,0 chr1 213123652 . G . PASS END=213123654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 213123655 . C . PASS END=213123655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 213123656 . C . PASS END=213123656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 213123657 . A . PASS END=213123684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:26:0,71,1047:0,71,255:26,0 chr1 213123685 . T . PASS END=213123688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 213123689 . A . PASS END=213123689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 213123690 . T . PASS END=213123698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 213123699 . G . PASS END=213123699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:27,0 chr1 213123700 . C . PASS END=213123707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 213123708 . C . PASS END=213123708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:25,0 chr1 213123709 . G . PASS END=213123709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 213123710 . C . PASS END=213123741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,795:0,72,255:25,0 chr1 213123742 . T . PASS END=213123742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 213123743 . C . PASS END=213123754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr1 213123755 . A . PASS END=213123755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 213123756 . G . PASS END=213123764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 213123765 . T . PASS END=213123791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,52,255:19,0 chr1 213123792 . C . PASS END=213123793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 213123794 . C . PASS END=213123794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 213123795 . T . PASS END=213123795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr1 213123796 . G . PASS END=213123811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 213123812 . T . PASS END=213123814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 213123815 . C . PASS END=213123826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 213123827 . T . PASS END=213123827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,391:0,28,255:12,0 chr1 213123828 . T . PASS END=213123840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 213123841 . G . PASS END=213123841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:11,0 chr1 213123842 . C . PASS END=213123847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 213123848 . A . PASS END=213123849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr1 213123850 . C . PASS END=213123865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 213123866 . C . LowGQ END=213123866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,416:5,0,255:9,0 chr1 213123867 . G . PASS END=213123869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:12,0 chr1 213123870 . G . PASS END=213123871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 213123872 . C . PASS END=213123872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 213123873 . C . PASS END=213123874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 213123875 . A . PASS END=213123882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 213123883 . A . PASS END=213123883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 213123884 . T . PASS END=213123888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr1 213123889 . A . PASS END=213123889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 213123890 . A . PASS END=213123911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr1 213123912 . C . PASS END=213123912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213123913 . T . PASS END=213123914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 213123915 . G . PASS END=213123917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 213123918 . T . PASS END=213123918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr1 213123919 . A . PASS END=213123924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 213123925 . C . PASS END=213123926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213123927 . C . PASS END=213123928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 213123929 . G . PASS END=213123931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213123932 . T . PASS END=213123942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr1 213123943 . A . PASS END=213123943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr1 213123944 . A . PASS END=213123950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 213123951 . A . PASS END=213123960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 213123961 . G . PASS END=213123965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 213123966 . G . PASS END=213123985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 213123986 . G . PASS END=213124002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 213124003 . A . PASS END=213124004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:33:24:0,33,807:0,33,255:24,0 chr1 213124005 . G . PASS END=213124006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:23,0 chr1 213124007 . C . PASS END=213124008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr1 213124009 . A . PASS END=213124009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:21,0 chr1 213124010 . G . PASS END=213124012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:21,0 chr1 213124013 . G . PASS END=213124013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 213124014 . C . PASS END=213124014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 213124015 . A . PASS END=213124017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 213124018 . A . PASS END=213124018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 213124019 . G . PASS END=213124019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 213124020 . C . PASS END=213124020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:24,0 chr1 213124021 . A . PASS END=213124021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 213124022 . G . PASS END=213124022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 213124023 . C . PASS END=213124024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:24,0 chr1 213124025 . G . PASS END=213124030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,945:0,42,255:23,0 chr1 213124031 . G . PASS END=213124039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 213124040 . C . PASS END=213124040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr1 213124041 . C . PASS END=213124049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 213124050 . A . PASS END=213124050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:20,0 chr1 213124051 . G . PASS END=213124052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 213124053 . C . PASS END=213124053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 213124054 . T . PASS END=213124067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:22,0 chr1 213124068 . G . PASS END=213124082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 213124524 . G . PASS END=213124524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:20,0 chr1 213124525 . T . PASS END=213124525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,656:0,24,255:20,0 chr1 213124526 . A . PASS END=213124527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 213124885 . A . PASS END=213124887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 213124888 . A . LowGQ END=213124888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 213124889 . C . PASS END=213124931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr1 213124932 . C . PASS END=213124952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 213124953 . G . PASS END=213124961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:13,0 chr1 213124962 . C . PASS END=213124986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 213124987 . A . PASS END=213124987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 213124988 . G . PASS END=213125028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,612:0,40,255:19,0 chr1 213125029 . T . PASS END=213125032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 213125033 . A . PASS END=213125084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,651:0,41,255:19,0 chr1 213125085 . G . PASS END=213125085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 213125086 . A . PASS END=213125090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 213125091 . C . PASS END=213125104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 213125105 . A . PASS END=213125105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:9,0 chr1 213125106 . C . PASS END=213125115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:10,0 chr1 213125116 . G . PASS END=213125116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 213125117 . G . PASS END=213125119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 213125120 . A . PASS END=213125120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr1 213125121 . A . PASS END=213125126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 213125127 . G . PASS END=213125137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 213125138 . G . PASS END=213125143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 213125144 . C . PASS END=213125150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:7,0 chr1 213125151 . C . PASS END=213125160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 213134311 . A . PASS END=213134311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 213134312 . T . PASS END=213134312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 213134313 . G . PASS END=213134313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 213134314 . A . PASS END=213134314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 213134315 . G . PASS END=213134364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:30:0,87,1131:0,90,255:40,0 chr1 213134508 . C . PASS END=213134639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1111:0,81,255:40,0 chr1 213134640 . G . PASS END=213134641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1317:0,73,255:33,0 chr1 213134642 . C . PASS END=213134642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1371:0,95,255:32,0 chr1 213134643 . A . PASS END=213134643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:32,0 chr1 213134644 . T . PASS END=213134644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:32,0 chr1 213134645 . G . PASS END=213134649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:64:34:0,64,1233:0,64,255:32,0 chr1 213134650 . T . PASS END=213134651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 213134652 . G . PASS END=213134652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr1 213134653 . C . PASS END=213134653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 213134654 . A . PASS END=213134654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:31,0 chr1 213134655 . A . PASS END=213134657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1225:0,86,255:32,0 chr1 213134658 . C . PASS END=213134659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:33:0,64,1169:0,64,255:30,0 chr1 213134660 . G . PASS END=213134660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:29,0 chr1 213134661 . G . PASS END=213134661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 213134662 . T . PASS END=213134662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 213134663 . G . PASS END=213134664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 213134665 . C . PASS END=213134665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:29,0 chr1 213134666 . A . PASS END=213134666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:28,0 chr1 213134667 . A . PASS END=213134668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1170:0,83,255:28,0 chr1 213134669 . T . PASS END=213134670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,990:0,83,255:24,0 chr1 213134671 . T . PASS END=213134672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:23,0 chr1 213134673 . T . PASS END=213134677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1035:0,65,255:23,0 chr1 213134678 . A . PASS END=213134678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1010:0,24,255:22,0 chr1 213134679 . G . PASS END=213134680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:31:0,69,1035:0,80,255:24,0 chr1 213134681 . T . PASS END=213134684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:27:0,45,941:0,45,255:24,0 chr1 213134685 . C . PASS END=213134686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:23,0 chr1 213134687 . T . PASS END=213134687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:23,0 chr1 213134688 . C . PASS END=213134690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 213134691 . A . PASS END=213134691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:24,0 chr1 213134692 . A . PASS END=213134692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:23,0 chr1 213134693 . G . PASS END=213134694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,876:0,42,255:23,0 chr1 213134695 . T . PASS END=213134701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,892:0,61,255:22,0 chr1 213134702 . G . PASS END=213134702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:20,0 chr1 213139064 . A . PASS END=213139120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,118,1800:0,118,255:40,0 chr1 213139613 . G . PASS END=213139687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,135,255:40,0 chr1 213140456 . A . PASS END=213140468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,167,255:40,0 chr1 213145922 . C . PASS END=213145922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 213145923 . T . PASS END=213145925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1019:0,87,255:29,0 chr1 213145926 . T . PASS END=213145926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 213145927 . T . PASS END=213145932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,959:0,87,255:29,0 chr1 213145933 . A . PASS END=213145933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,997:0,57,255:28,0 chr1 213145934 . T . PASS END=213145934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 213145935 . G . PASS END=213145935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 213145936 . G . PASS END=213145939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1095:0,93,255:31,0 chr1 213145940 . G . PASS END=213145940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 213145941 . C . PASS END=213145948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1202:0,83,255:36,0 chr1 213145949 . T . PASS END=213145949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1275:0,75,255:32,0 chr1 213145950 . G . PASS END=213146054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:34:0,82,1188:0,82,255:40,0 chr1 213146055 . C . PASS END=213146058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 213146059 . G . PASS END=213146117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:33:0,90,1181:0,91,255:37,0 chr1 213146118 . T . PASS END=213146118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 213146119 . T . PASS END=213146126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:31,0 chr1 213146127 . T . PASS END=213146127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,926:0,60,255:29,0 chr1 213146128 . C . PASS END=213146245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,1133:0,82,255:40,0 chr1 213146246 . G . PASS END=213146246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr1 213146247 . C . PASS END=213146270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr1 213146271 . C . PASS END=213146292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,65,255:26,0 chr1 213146293 . T . PASS END=213146301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:16,0 chr1 213146302 . A . PASS END=213146302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 213146303 . G . PASS END=213146303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:14,0 chr1 213147297 . A . PASS END=213147318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 213147319 . A . PASS END=213147319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 213147320 . C . PASS END=213147375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,864:0,61,255:26,0 chr1 213147376 . C . PASS END=213147383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:18,0 chr1 213147384 . C . PASS END=213147389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:18:0,39,585:0,54,255:13,0 chr1 213147390 . A . PASS END=213147395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr1 213147396 . G . PASS END=213147407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 213147408 . A . PASS END=213147408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:11,0 chr1 213147409 . A . PASS END=213147412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 213147939 . C . PASS END=213147972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,114,1759:0,114,255:40,0 chr1 213161854 . G . PASS END=213161926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,110,1479:0,110,255:40,0 chr1 213168383 . T . PASS END=213168534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,111,1668:0,111,255:40,0 chr1 213170497 . C . PASS END=213170659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:42:0,81,1435:0,81,255:40,0 chr1 213170660 . T . PASS END=213170660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:35,0 chr1 213173668 . T . PASS END=213173695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:54:0,120,1800:0,146,255:40,0 chr1 213173696 . G T, 49.26 PASS DP=63;MQ=250.00;MQRankSum=6.792;ReadPosRankSum=2.986;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,29,0:0.460,0.000:63:10,15,0:24,14,0:48:84,0,50,898,1208,2106:255,0,255:28,0:4.9264e+01,7.3258e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,14,14,15:22,12,18,11 chr1 213173697 . C . PASS END=213173725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1774:0,120,255:40,0 chr1 213174128 . C . PASS END=213174131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr1 213174132 . C . PASS END=213174136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 213174137 . C . PASS END=213174137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 213174138 . T . PASS END=213174142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 213174143 . T . PASS END=213174143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 213174144 . T . PASS END=213174149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr1 213174150 . C . PASS END=213174254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1024:0,81,255:40,0 chr1 213178375 . C . PASS END=213178375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 213178376 . T . PASS END=213178377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,984:0,70,255:28,0 chr1 213178378 . T . PASS END=213178383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1156:0,83,255:32,0 chr1 213178384 . G . PASS END=213178384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 213178385 . G . PASS END=213178398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1225:0,86,255:37,0 chr1 213178399 . A . PASS END=213178399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:35,0 chr1 213178400 . T . PASS END=213178777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1037:0,81,255:40,0 chr1 213178778 . T . PASS END=213178780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 213178781 . T . PASS END=213178781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:24,0 chr1 213178782 . A . PASS END=213178796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,945:0,60,255:26,0 chr1 213180471 . C . PASS END=213180494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:96:0,120,1800:0,236,255:40,0 chr1 213180495 . T . PASS END=213180540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:82:0,120,1800:0,211,255:40,0 chr1 213181552 . G . PASS END=213181559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 213181560 . C . PASS END=213181561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:20,2 chr1 213181562 . A . PASS END=213181572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 213181573 . T . PASS END=213181582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,597:0,43,255:19,0 chr1 213181583 . A . PASS END=213181600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:26,0 chr1 213181601 . C . PASS END=213181602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 213181603 . C . PASS END=213181603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 213181604 . C . PASS END=213181808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:29:0,84,1260:0,87,255:40,0 chr1 213184550 . C . PASS END=213184556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr1 213186435 . C . PASS END=213186680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:36:0,84,1252:0,84,255:40,0 chr1 213186681 . A . PASS END=213186681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr1 213186682 . G . PASS END=213186724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1260:0,85,255:38,0 chr1 213186725 . C . PASS END=213186725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 213186726 . C . PASS END=213186726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 213186727 . C . PASS END=213186734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr1 213186735 . T . PASS END=213186735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 213186736 . C . PASS END=213186740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 213186741 . G . PASS END=213186754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:21,0 chr1 213186755 . G . PASS END=213186757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:19,0 chr1 213186758 . T . PASS END=213186758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:17,0 chr1 213186759 . A . PASS END=213186760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 213188568 . T . PASS END=213188581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,587:0,57,255:19,0 chr1 213188582 . C . PASS END=213188582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 213188583 . T . PASS END=213188607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,682:0,54,255:19,0 chr1 213188608 . A . PASS END=213188608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 213188609 . C . PASS END=213188610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 213188611 . G . PASS END=213188617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 213188618 . G . PASS END=213188618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 213188619 . G . PASS END=213188621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 213188622 . T . PASS END=213188622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr1 213188623 . G . PASS END=213188623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 213188624 . T . PASS END=213188624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr1 213188625 . G . PASS END=213188631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 213188632 . A . PASS END=213188633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 213188634 . G . PASS END=213188644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,833:0,72,255:24,0 chr1 213188645 . T . PASS END=213188645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr1 213188646 . C . PASS END=213188646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 213188647 . T . PASS END=213188647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 213188648 . G . PASS END=213188672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,917:0,72,255:26,0 chr1 213188673 . C . PASS END=213188715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,674:0,44,255:19,0 chr1 213188955 . C . PASS END=213188977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:34:0,86,1092:0,86,255:37,0 chr1 213188978 . G . PASS END=213188978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 213188979 . C . PASS END=213188986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1340:0,81,255:36,0 chr1 213188987 . C . PASS END=213188988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:75:36:0,75,1217:0,75,255:30,0 chr1 213188989 . T . PASS END=213189002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1333:0,81,255:36,0 chr1 213189003 . C . PASS END=213189003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:32,0 chr1 213189004 . A . PASS END=213189009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,102,255:32,0 chr1 213189010 . C . PASS END=213189010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1125:0,55,255:26,0 chr1 213189011 . C . PASS END=213189011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 213189012 . A . PASS END=213189012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:26,0 chr1 213189013 . T . PASS END=213189013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,98,255:27,0 chr1 213224747 . A . PASS END=213224753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 213224754 . C . PASS END=213224756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 213224757 . A . PASS END=213224765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 213224766 . G . PASS END=213224766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 213224767 . G . PASS END=213224775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 213224776 . C . PASS END=213224776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 213224777 . C . PASS END=213224807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,629:0,48,255:17,0 chr1 213224808 . A . PASS END=213224808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 213224809 . G . PASS END=213224826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 213224827 . C . PASS END=213224829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 213224830 . A . PASS END=213224851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,325:0,27,255:9,0 chr1 213244348 . G . PASS END=213244383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:95:0,120,1800:0,234,255:40,0 chr1 213251038 . A . PASS END=213251158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:71:0,120,1800:0,197,255:40,0 chr1 213277796 . G . PASS END=213277911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:41:0,99,1485:0,118,255:40,0 chr1 213290659 . G . PASS END=213290752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:39:0,93,1395:0,117,255:40,0 chr1 213302870 . G . PASS END=213302923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1111:0,87,255:37,0 chr1 213302924 . C . PASS END=213302924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:33,0 chr1 213302925 . T . PASS END=213303041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:33:0,87,1295:0,95,255:38,0 chr1 213303042 . A . PASS END=213303042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1313:0,79,255:33,0 chr1 213303043 . A . PASS END=213303216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:33:0,83,1200:0,83,255:40,0 chr1 213303217 . C . PASS END=213303217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 213303218 . T . PASS END=213303219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 213303220 . G . PASS END=213303227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,973:0,71,255:28,0 chr1 213303228 . T . PASS END=213303230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:29,0 chr1 213303231 . A . PASS END=213303232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 213341201 . G . PASS END=213341238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,101,1398:0,101,255:40,0 chr1 213341239 . A . PASS END=213341316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,105,1620:0,105,255:40,0 chr1 213349743 . C . PASS END=213349749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 213349750 . G . PASS END=213349771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 213349772 . T . PASS END=213349772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,799:0,34,255:23,0 chr1 213349773 . T . PASS END=213349773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 213349774 . G . PASS END=213349781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:33,0 chr1 213349782 . A . PASS END=213349782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 213349783 . G . PASS END=213349813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:32,0 chr1 213349814 . A . PASS END=213349835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:25:0,72,894:0,75,255:25,0 chr1 213403840 . G . PASS END=213403887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:58:0,120,1800:0,161,255:40,0 chr1 213405466 . G . PASS END=213405466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1355:0,95,255:35,0 chr1 213405467 . G . PASS END=213405467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 213405468 . T . PASS END=213405469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:39:0,86,1390:0,86,255:38,0 chr1 213405470 . T . PASS END=213405470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 213405471 . A . PASS END=213405472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1360:0,84,255:37,0 chr1 213405473 . G . PASS END=213405473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1357:0,62,255:36,0 chr1 213405474 . G . PASS END=213405475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1441:0,101,255:38,0 chr1 213405476 . A . PASS END=213405476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:37,0 chr1 213405477 . A . PASS END=213405529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:38:0,81,1351:0,81,255:40,0 chr1 213405530 . A . PASS END=213405530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1768:0,79,255:40,0 chr1 213405531 . C . PASS END=213405531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,118,1914:0,118,255:40,0 chr1 213405532 . A . PASS END=213405532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1799:0,79,255:40,0 chr1 213405533 . T . PASS END=213405592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:95:34:0,95,1250:0,95,255:40,0 chr1 213405593 . C . PASS END=213405593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr1 213405594 . G . PASS END=213405598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1288:0,102,255:34,0 chr1 213414045 . G . PASS END=213415640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:38:0,83,1197:0,83,255:40,0 chr1 213415912 . G . PASS END=213415917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:37:0,80,1146:0,80,255:38,0 chr1 213415918 . T . PASS END=213415918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:25:40:0,25,1130:0,25,255:34,0 chr1 213415919 . T . PASS END=213415919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 213415920 . C . PASS END=213415920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:40:41:0,40,1103:0,40,255:33,0 chr1 213415921 . A . PASS END=213415921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 213415922 . G . PASS END=213415922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1184:0,59,255:36,0 chr1 213415923 . C . PASS END=213415934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:40:0,92,1316:0,92,255:40,0 chr1 213415935 . A . PASS END=213415935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1321:0,76,255:39,0 chr1 213415936 . G . PASS END=213415936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:40:41:0,40,1172:0,40,255:36,0 chr1 213415937 . C . PASS END=213415947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:98:41:0,98,1361:0,98,255:40,0 chr1 213415948 . A . PASS END=213415948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:37:44:0,37,1381:0,37,255:37,0 chr1 213415949 . G . PASS END=213416001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:40:0,87,1305:0,91,255:40,0 chr1 213434901 . A . PASS END=213434983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,111,1665:0,132,255:40,0 chr1 213436064 . A . PASS END=213436159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,116,1612:0,116,255:40,0 chr1 213445867 . C . PASS END=213445977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1187:0,81,255:40,0 chr1 213552076 . A . PASS END=213552081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,197,255:40,0 chr1 214159256 . T C, 47.49 PASS DP=33;MQ=249.78;MQRankSum=4.719;ReadPosRankSum=3.338;FractionInformativeReads=0.970;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,13,0:0.406,0.000:32:6,7,0:13,6,0:46:82,0,50,436,643,1079:255,0,255:17,0:4.7486e+01,9.9144e-05,5.3000e+01,4.3623e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,11,9,4:13,6,5,8 chr1 214169879 . A . PASS END=214170371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:30:0,80,1260:0,80,255:40,0 chr1 214170372 . A . PASS END=214170372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1474:0,74,255:38,0 chr1 214170373 . G . PASS END=214170434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1260:0,93,255:40,0 chr1 214170435 . G . PASS END=214170435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 214170436 . C . PASS END=214170522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:30:0,82,992:0,82,255:39,0 chr1 214170523 . G . PASS END=214170523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:29,0 chr1 214170524 . C . PASS END=214170541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1202:0,86,255:32,0 chr1 214170542 . C . PASS END=214170547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1053:0,71,255:26,0 chr1 214170548 . C . PASS END=214170548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 214170549 . T . PASS END=214170549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:25,0 chr1 214170550 . G . PASS END=214170559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1070:0,87,255:29,0 chr1 214170560 . C . PASS END=214170569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1047:0,71,255:27,0 chr1 214170570 . A . PASS END=214170570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:24,0 chr1 214170571 . G . PASS END=214170579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 214170580 . G . PASS END=214170582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 214170583 . G . PASS END=214170602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:28,0 chr1 214170603 . A . PASS END=214170636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,954:0,71,255:26,0 chr1 214170637 . G . PASS END=214170637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 214170638 . C . PASS END=214170641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 214170642 . A . PASS END=214170652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:27,0 chr1 214170653 . C . PASS END=214170654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 214170655 . A . PASS END=214170661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 214170662 . G . PASS END=214170662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 214170663 . A . PASS END=214170666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 214170667 . C . PASS END=214170667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 214170668 . A . PASS END=214170683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:29,0 chr1 214170684 . A . PASS END=214170684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 214170685 . T . PASS END=214170928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,83,255:40,2 chr1 214170929 . A . PASS END=214170929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1414:0,68,255:35,0 chr1 214170930 . C . PASS END=214170955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1350:0,104,255:39,0 chr1 214170956 . A . PASS END=214170957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:37:0,78,1170:0,111,255:26,0 chr1 214170958 . G . PASS END=214170989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1147:0,80,255:30,0 chr1 214170990 . T . PASS END=214170990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 214170991 . T . PASS END=214171012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:30,0 chr1 214171013 . G . PASS END=214171013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 214171014 . T . PASS END=214171017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 214171018 . T . PASS END=214171023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 214171024 . C . PASS END=214171024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 214171025 . T . PASS END=214171027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 214171028 . C . PASS END=214171028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:27,0 chr1 214171029 . C . PASS END=214171042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 214171043 . C . PASS END=214171045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 214171046 . C . PASS END=214171047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 214171048 . G . PASS END=214171060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 214171061 . G . PASS END=214171067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 214171068 . G . PASS END=214171073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 214171074 . A . PASS END=214171074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 214171075 . C . PASS END=214171080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr1 214171081 . T . PASS END=214171126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,865:0,65,255:26,0 chr1 214171127 . A . PASS END=214171127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,892:0,37,255:25,0 chr1 214171128 . T . PASS END=214171139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,985:0,84,255:28,0 chr1 214171140 . T . PASS END=214171140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 214171141 . G . PASS END=214171142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 214171143 . A . PASS END=214171153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,76,255:26,0 chr1 214171154 . A . PASS END=214171157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 214171158 . T . PASS END=214171158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 214171159 . G . PASS END=214171189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1180:0,92,255:34,0 chr1 214171190 . G . PASS END=214171190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:32,0 chr1 214171191 . C . PASS END=214171236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1116:0,86,255:34,0 chr1 214171237 . C . PASS END=214171237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 214171238 . G . PASS END=214171252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:32,0 chr1 214171253 . G . PASS END=214171253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 214171254 . G . PASS END=214171283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1177:0,80,255:32,0 chr1 214171284 . T . PASS END=214171284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 214171285 . C . PASS END=214171321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:33:0,94,1241:0,94,255:36,0 chr1 214171322 . C . PASS END=214171322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1176:0,66,255:31,0 chr1 214171323 . A . PASS END=214171323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1350:0,91,255:29,0 chr1 214171324 . C . PASS END=214171324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1114:0,77,255:29,0 chr1 214171325 . C . PASS END=214171326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,91,255:30,0 chr1 214171327 . C . PASS END=214171327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:29,0 chr1 214171328 . T . PASS END=214171341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:31,0 chr1 214171342 . G . PASS END=214171343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 214171344 . T . PASS END=214171360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr1 214171361 . A . PASS END=214171363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 214171364 . C . PASS END=214171365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 214171366 . A . PASS END=214171367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 214171368 . T . PASS END=214171371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 214171372 . T . PASS END=214171372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:27,0 chr1 214171373 . G . PASS END=214171377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 214171378 . C . PASS END=214171381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1017:0,73,255:26,0 chr1 214171382 . G . PASS END=214171391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 214171392 . C . PASS END=214171392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 214171393 . T . PASS END=214171393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 214171394 . G . PASS END=214171394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 214171395 . G . PASS END=214171396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 214171397 . A . PASS END=214171406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,873:0,67,255:26,0 chr1 214171407 . C . PASS END=214171407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:26,0 chr1 214171408 . C . PASS END=214171409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,889:0,70,255:26,0 chr1 214171410 . C . PASS END=214171423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1180:0,93,255:31,0 chr1 214171424 . G . PASS END=214171424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 214171425 . A . PASS END=214171425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 214171426 . C . PASS END=214171427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr1 214171428 . T . PASS END=214171429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 214171430 . A . PASS END=214171430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,994:0,46,255:26,0 chr1 214171431 . C . PASS END=214171431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 214171432 . T . PASS END=214171438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:30:0,63,1078:0,63,255:26,0 chr1 214171439 . A . PASS END=214171439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:24,0 chr1 214171440 . C . PASS END=214171444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:25,0 chr1 214171445 . A . PASS END=214171445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 214171446 . G . PASS END=214171446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 214171447 . T . PASS END=214171456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 214171457 . A . PASS END=214171458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 214171459 . G . PASS END=214171605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1218:0,84,255:40,0 chr1 214178508 . A . PASS END=214178597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,99,1485:0,107,255:40,0 chr1 214178598 . T . PASS END=214178598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:28,0 chr1 214178599 . A . PASS END=214178605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:34:0,86,1241:0,86,255:31,0 chr1 214178606 . C . PASS END=214178615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,70,255:26,0 chr1 214184864 . T . PASS END=214185019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:36:0,81,1199:0,94,255:40,0 chr1 214185020 . G . PASS END=214185027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr1 214185028 . C . PASS END=214185031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:28:0,54,810:0,71,255:19,0 chr1 214185032 . C . PASS END=214185034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:21,0 chr1 214185035 . T . PASS END=214185043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,69,255:19,0 chr1 214185044 . G . PASS END=214185044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,743:0,39,255:18,0 chr1 214185045 . C . PASS END=214185046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:20,0 chr1 214185047 . A . PASS END=214185047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 214185048 . A . PASS END=214185048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,593:0,29,255:19,0 chr1 214185049 . T . PASS END=214185049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 214185050 . G . PASS END=214185058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 214208989 . C . PASS END=214209177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:38:0,111,1462:0,112,255:40,0 chr1 214454598 . A . PASS END=214454619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,164:6,0 chr1 214454620 . G . PASS END=214454633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 214454634 . T . PASS END=214454654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 214454655 . G . PASS END=214454660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 214454661 . C . PASS END=214454666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 214454667 . C . PASS END=214454676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:9,0 chr1 214454677 . T . PASS END=214454677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 214454678 . C . PASS END=214454685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 214454686 . G . PASS END=214454704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 214454705 . C . PASS END=214454746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 214454747 . C . PASS END=214454749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 214454750 . C . PASS END=214454757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 214454758 . A . PASS END=214454765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr1 214454766 . A . PASS END=214454770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:5:0,9,135:0,15,194:3,0 chr1 214478530 . G . PASS END=214478530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr1 214478531 . A . PASS END=214478593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1097:0,85,255:37,0 chr1 214488105 . A . PASS END=214488201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1161:0,80,255:40,0 chr1 214488202 . T . PASS END=214488202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 214488203 . T . PASS END=214488203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 214488204 . C . PASS END=214488215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1030:0,68,255:26,0 chr1 214491422 . A . PASS END=214491482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,127,255:40,0 chr1 214492202 . A . PASS END=214492248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,117,1706:0,117,255:40,0 chr1 214492249 . A . PASS END=214492285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:76:0,120,1800:0,212,255:40,0 chr1 214492286 . G A, 273.90 PASS DP=76;MQ=249.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,76,0:1.000,0.000:76:0,38,0:0,38,0:224:312,227,0,2814,227,2814:255,228,0:0,0:2.7390e+02,2.2390e+02,0.0000e+00,4.5000e+02,2.5867e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,38:0,0,40,36 chr1 214492287 . A . PASS END=214492323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:61:0,120,1800:0,166,255:40,0 chr1 214492324 . C . PASS END=214492326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,133,255:40,0 chr1 214497984 . G . PASS END=214498051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,111,1746:0,111,255:40,0 chr1 214500965 . T . PASS END=214501067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,107,1459:0,107,255:40,0 chr1 214503511 . G . PASS END=214503526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:43:0,96,1490:0,96,255:40,0 chr1 214503527 . T . PASS END=214503621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,114,1710:0,126,255:40,0 chr1 214504293 . G . PASS END=214504413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:37:0,81,1215:0,98,255:40,0 chr1 214505361 . C . PASS END=214505361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 214505362 . C . PASS END=214505363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 214505364 . C . PASS END=214505364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 214505365 . T . PASS END=214505367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 214505368 . T . PASS END=214505368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 214505369 . G . PASS END=214505369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 214505370 . A . PASS END=214505370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 214505371 . G . PASS END=214505372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 214505373 . T . PASS END=214505373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 214505374 . G . PASS END=214505376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr1 214505377 . G . PASS END=214505377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 214505378 . G . PASS END=214505380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:31,0 chr1 214505381 . A . PASS END=214505381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1040:0,79,255:30,0 chr1 214505382 . T . PASS END=214505404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1135:0,80,255:33,0 chr1 214505405 . A . PASS END=214505405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1203:0,74,255:30,0 chr1 214505406 . T . PASS END=214505512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1215:0,84,255:40,0 chr1 214505513 . C . PASS END=214505535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 214507543 . T . PASS END=214507543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr1 214507544 . A . PASS END=214507545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr1 214507546 . G . PASS END=214507547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 214507548 . A . PASS END=214507548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 214507549 . C . PASS END=214507550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 214507551 . A . PASS END=214507551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 214507552 . T . PASS END=214507636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:31:0,85,1188:0,85,255:40,0 chr1 214507637 . A . PASS END=214507637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1275:0,65,255:35,0 chr1 214507638 . A . PASS END=214507651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1394:0,98,255:36,0 chr1 214510042 . C . PASS END=214510127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,131,255:40,0 chr1 214531265 . T . PASS END=214531393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:36:0,96,1344:0,107,255:40,0 chr1 214537855 . T . PASS END=214538017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:31:0,81,1215:0,85,255:40,0 chr1 214538018 . G . PASS END=214538018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr1 214542800 . A . PASS END=214542817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,421:0,39,255:13,0 chr1 214542818 . C . PASS END=214542818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 214542819 . T C, 49.37 PASS DP=14;MQ=250.00;MQRankSum=3.034;ReadPosRankSum=2.130;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,6,0:0.429,0.000:14:4,2,0:4,4,0:48:84,0,50,198,282,481:174,0,255:8,0:4.9375e+01,7.1964e-05,5.3000e+01,1.9842e+02,3.1695e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,2,5,1:4,4,3,3 chr1 214542820 . T . PASS END=214542832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:19,0 chr1 214542833 . G . PASS END=214542833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 214542834 . A . PASS END=214542834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,543:0,13,255:17,0 chr1 214542835 . T . PASS END=214542852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:26,0 chr1 214542853 . T . PASS END=214542853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:25,0 chr1 214542854 . G . PASS END=214542856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 214542857 . A . PASS END=214542881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1034:0,84,255:31,0 chr1 214542882 . A . PASS END=214542882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 214542883 . G . PASS END=214542911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:35,0 chr1 214542912 . G . PASS END=214542912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 214542913 . G . PASS END=214543034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:36:0,83,1222:0,83,255:40,0 chr1 214546054 . C . PASS END=214546054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 214546055 . T . PASS END=214546055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 214546056 . C . PASS END=214546078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1156:0,83,255:36,0 chr1 214546079 . A . PASS END=214546079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:35,0 chr1 214546080 . C . PASS END=214546145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1125:0,90,255:37,0 chr1 214546146 . T . PASS END=214546153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:25,0 chr1 214546154 . T . PASS END=214546170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,630:0,40,255:19,0 chr1 214546171 . G . PASS END=214546182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:13:0,24,360:0,37,255:9,0 chr1 214549562 . C . PASS END=214549567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr1 214549568 . G . PASS END=214549768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:28:0,80,1011:0,80,255:40,0 chr1 214549769 . C . PASS END=214549770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:25,0 chr1 214549771 . G . PASS END=214549780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:27:0,48,720:0,77,255:18,0 chr1 214551302 . C . PASS END=214551303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 214551304 . T . PASS END=214551304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1074:0,65,255:27,0 chr1 214551305 . C . PASS END=214551313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr1 214551314 . G . PASS END=214551421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1235:0,84,255:40,0 chr1 214551422 . T . PASS END=214551422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:28,0 chr1 214551423 . G . PASS END=214551430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,91,255:30,0 chr1 214551431 . C . PASS END=214551431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:29,0 chr1 214551432 . T . PASS END=214551440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 214551441 . A . PASS END=214551441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:25,0 chr1 214551442 . G . PASS END=214551445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 214556654 . C . PASS END=214556654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,374:0,25,255:13,0 chr1 214556655 . C . PASS END=214556666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:15,0 chr1 214556667 . T . PASS END=214556667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 214556668 . C . PASS END=214556670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 214556671 . T . PASS END=214556671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 214556672 . C . PASS END=214556672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 214556673 . T . PASS END=214556673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 214556674 . C . PASS END=214556677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 214556678 . A . PASS END=214556678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 214556679 . A . PASS END=214556686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr1 214556687 . T . PASS END=214556687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 214556688 . T . PASS END=214556715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,930:0,62,255:26,0 chr1 214556716 . T . PASS END=214556716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,950:0,56,255:25,0 chr1 214556717 . C . PASS END=214556719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 214556720 . C . PASS END=214556720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 214556721 . T . PASS END=214556721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 214556722 . T . PASS END=214556727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 214556728 . G . PASS END=214556728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:26,0 chr1 214556729 . C . PASS END=214556730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 214556731 . C . PASS END=214556733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:28,1 chr1 214556734 . T . PASS END=214556742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 214556743 . G . PASS END=214556745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 214556746 . C . PASS END=214556749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 214556750 . C . PASS END=214556750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 214556751 . A . PASS END=214556752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 214556753 . A . PASS END=214556753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:27,0 chr1 214556754 . C . PASS END=214556764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 214556765 . G . PASS END=214556765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 214556766 . G . PASS END=214556769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 214556770 . C . PASS END=214556792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,846:0,64,255:26,0 chr1 214556793 . G . PASS END=214556794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 214556795 . C . PASS END=214556849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:26,0 chr1 214556850 . T . PASS END=214556931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,637:0,41,255:18,0 chr1 214556932 . T . PASS END=214556943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,507:0,34,255:13,0 chr1 214556944 . A . PASS END=214556950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 214556951 . C . PASS END=214556951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 214556952 . G . PASS END=214556953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 214556954 . G . PASS END=214556954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 214556955 . G . PASS END=214556971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 214556972 . G . PASS END=214556991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:24,0 chr1 214556992 . G . PASS END=214556992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 214556993 . G . PASS END=214556998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 214556999 . G . PASS END=214557001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 214557002 . C . PASS END=214557002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 214557003 . T . PASS END=214557005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 214557006 . A . PASS END=214557006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 214557007 . T . PASS END=214557021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,964:0,84,255:29,0 chr1 214557022 . T . PASS END=214557022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 214557023 . G . PASS END=214557036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 214557037 . C . PASS END=214557037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 214557038 . C . PASS END=214557040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 214557041 . T . PASS END=214557041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr1 214557042 . T . PASS END=214557047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 214557048 . G . PASS END=214557048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:26,2 chr1 214557049 . C . PASS END=214557050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:27:32:0,27,1049:0,27,255:26,2 chr1 214557051 . T . PASS END=214557053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1102:0,33,255:28,2 chr1 214557054 . T . PASS END=214557054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:16:34:0,16,1100:0,16,255:27,2 chr1 214557055 . C . PASS END=214557055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:30,0 chr1 214557056 . C . PASS END=214557111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:30:0,82,1117:0,82,255:34,0 chr1 214557112 . T . PASS END=214557114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr1 214557115 . T . PASS END=214557115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 214557116 . G . PASS END=214557135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:28:0,62,1088:0,62,255:26,0 chr1 214557136 . G . PASS END=214557136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:25,0 chr1 214557137 . G . PASS END=214557140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 214557141 . A . PASS END=214557141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,861:0,34,255:23,0 chr1 214557142 . C . PASS END=214557154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1117:0,87,255:30,0 chr1 214557155 . T . PASS END=214557155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,966:0,73,255:29,0 chr1 214557156 . G . PASS END=214557355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1149:0,93,255:40,0 chr1 214557356 . A . PASS END=214557356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 214557357 . G . PASS END=214557382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1299:0,97,255:38,0 chr1 214557383 . C . PASS END=214557383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1318:0,67,255:31,0 chr1 214557384 . G . PASS END=214557386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:31,0 chr1 214557387 . A . PASS END=214557387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1252:0,75,255:31,0 chr1 214557388 . G . PASS END=214557447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1163:0,80,255:37,0 chr1 214557448 . T . PASS END=214557448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr1 214557449 . G . PASS END=214557451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:33,0 chr1 214557452 . C . PASS END=214557453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 214557454 . G . PASS END=214557489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1194:0,83,255:31,0 chr1 214557490 . A . PASS END=214557492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 214557493 . G . PASS END=214557493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:24,0 chr1 214557494 . G . PASS END=214557573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,894:0,64,255:26,0 chr1 214557574 . G . PASS END=214557615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1225:0,86,255:39,0 chr1 214557616 . G . PASS END=214557616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr1 214557617 . C . PASS END=214557804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1215:0,86,255:40,0 chr1 214557805 . A . PASS END=214557806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,964:0,71,255:27,0 chr1 214557807 . T . PASS END=214557831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1247:0,86,255:31,0 chr1 214557832 . T . PASS END=214557832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 214557833 . C . PASS END=214557843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1058:0,90,255:30,0 chr1 214557844 . T . PASS END=214557856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,74,255:28,0 chr1 214557857 . T . PASS END=214557857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 214557858 . G . PASS END=214557860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 214557861 . T . PASS END=214557861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 214557862 . C . PASS END=214557900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,846:0,61,255:26,0 chr1 214557901 . C . PASS END=214557902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 214557903 . C . PASS END=214557906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 214557907 . G . PASS END=214557910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 214557911 . G . PASS END=214557911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 214557912 . T . PASS END=214557916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 214557917 . C . PASS END=214557917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:26,0 chr1 214557918 . G . PASS END=214557957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1003:0,80,255:31,0 chr1 214557958 . T . PASS END=214557969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 214557970 . A . PASS END=214558111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,966:0,81,255:38,0 chr1 214558112 . A . PASS END=214558112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:27,0 chr1 214558113 . T . PASS END=214558113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 214558114 . T . PASS END=214558115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr1 214558116 . C . PASS END=214558122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 214558123 . A . PASS END=214558125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 214558126 . T . PASS END=214558127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 214558128 . C . PASS END=214558131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr1 214560187 . C . PASS END=214560265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:39:0,90,1311:0,90,255:40,0 chr1 214564331 . C . PASS END=214564339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1202:0,83,255:35,0 chr1 214564340 . T C, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.078;ReadPosRankSum=2.181;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,20,0:0.556,0.000:36:7,13,0:9,7,0:48:85,0,49,707,572,1279:255,0,255:16,0:5.0000e+01,7.0669e-05,5.2033e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,2,12,8:9,7,15,5 chr1 214564341 . C . PASS END=214564377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1363:0,95,255:40,0 chr1 214564378 . A . PASS END=214564388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,108,1620:0,129,255:40,0 chr1 214567038 . T . PASS END=214567059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:71:0,120,1800:0,175,255:40,0 chr1 214567060 . T . PASS END=214567120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,183,255:40,0 chr1 214568242 . C . PASS END=214568329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,126,255:40,0 chr1 214571256 . C . PASS END=214571344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:74:0,120,1800:0,194,255:40,0 chr1 214575028 . C . PASS END=214575115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,144,255:40,0 chr1 214576226 . C . PASS END=214576279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1121:0,92,255:36,0 chr1 214576280 . T . PASS END=214576280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1105:0,66,255:31,0 chr1 214576281 . C . PASS END=214576296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:32,0 chr1 214585027 . C . PASS END=214585094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:62:0,120,1800:0,163,255:40,0 chr1 214587972 . C . PASS END=214588069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,136,255:40,0 chr1 214625148 . C . PASS END=214625148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:31,0 chr1 214625149 . T . PASS END=214625175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1142:0,83,255:37,0 chr1 214625176 . C . PASS END=214625176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:35,0 chr1 214625177 . A . PASS END=214625308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:33:0,81,1127:0,82,255:40,0 chr1 214625309 . G . PASS END=214625317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 214637973 . C . PASS END=214637973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 214637974 . T . PASS END=214637974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr1 214637975 . C . PASS END=214637992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,709:0,63,255:24,0 chr1 214637993 . G . PASS END=214637993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 214637994 . G . PASS END=214638011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr1 214638012 . T . PASS END=214638022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1109:0,87,255:31,0 chr1 214638023 . T . PASS END=214638023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 214638024 . G . PASS END=214638120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1194:0,83,255:40,0 chr1 214638121 . C . PASS END=214638122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 214638123 . G . PASS END=214638134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1062:0,87,255:29,0 chr1 214638135 . A . PASS END=214638135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 214638136 . C . PASS END=214638141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 214638142 . G . PASS END=214638142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 214638143 . G . PASS END=214638144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1013:0,90,255:30,0 chr1 214638145 . A . PASS END=214638146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:25,0 chr1 214787098 . A . PASS END=214787120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,837:0,65,255:24,0 chr1 214787121 . G . PASS END=214787129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1213:0,87,255:33,0 chr1 214787130 . G A, 49.41 PASS DP=33;MQ=248.21;MQRankSum=4.863;ReadPosRankSum=0.416;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,15,0:0.455,0.000:33:12,11,0:6,4,0:48:84,0,50,534,644,1178:255,0,255:18,0:4.9408e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,10,5:9,9,8,7 chr1 214787131 . C . PASS END=214787167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:33:0,99,1249:0,99,255:40,0 chr1 214787168 . A . PASS END=214787259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:40:0,91,1354:0,91,255:40,0 chr1 214788172 . T . PASS END=214788172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 214788175 . G . PASS END=214788371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,120,1800:0,155,255:40,0 chr1 214791916 . G . PASS END=214792028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,127,255:40,0 chr1 214792029 . A . PASS END=214792029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:76:55:0,76,1612:0,76,255:37,0 chr1 214792030 . T . PASS END=214792037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,102,1558:0,102,255:40,0 chr1 214792472 . G . PASS END=214792563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:65:0,120,1800:0,179,255:40,0 chr1 214793996 . A . PASS END=214793996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1511:0,110,255:40,0 chr1 214793998 . A . PASS END=214794285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:37:0,90,1350:0,104,255:40,0 chr1 214794286 . C . PASS END=214794289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,92,255:20,0 chr1 214795422 . A . PASS END=214795597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:87:41:0,87,1305:0,113,255:40,0 chr1 214795598 . G . PASS END=214795598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:75:49:0,75,1125:0,147,255:25,0 chr1 214795599 . C . PASS END=214795599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:48:0,87,1305:0,144,255:29,0 chr1 214795600 . A . PASS END=214795600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:78:48:0,78,1170:0,144,255:26,0 chr1 214795601 . C . PASS END=214795601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:49:0,81,1215:0,147,255:27,0 chr1 214795602 . A . PASS END=214795622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:25,0 chr1 214795623 . A . PASS END=214795624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 214802389 . T . PASS END=214802514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,114,1710:0,115,255:40,0 chr1 214803875 . A . PASS END=214803875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1543:0,120,255:40,0 chr1 214803877 . G . PASS END=214804002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:35:0,87,1305:0,105,255:40,0 chr1 214804003 . A . PASS END=214804003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1184:0,50,255:27,0 chr1 214804004 . A . PASS END=214804005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,89,255:29,0 chr1 214805821 . A . PASS END=214805821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 214805823 . C . PASS END=214805931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:31:0,84,1149:0,84,255:40,0 chr1 214805932 . G . PASS END=214805932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:28,0 chr1 214805933 . G . PASS END=214805940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1350:0,91,255:31,0 chr1 214805941 . T . PASS END=214805945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,83,255:26,0 chr1 214811209 . G . PASS END=214811231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,907:0,75,255:26,0 chr1 214811232 . C . PASS END=214811243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1111:0,82,255:33,0 chr1 214811244 . C G, 49.44 PASS DP=35;MQ=249.97;MQRankSum=4.388;ReadPosRankSum=2.268;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,16,0:0.457,0.000:35:10,5,0:9,11,0:48:84,0,50,572,679,1252:255,0,255:18,0:4.9437e+01,7.1187e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,10,6:7,12,9,7 chr1 214811245 . T . PASS END=214811281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:34:0,87,1274:0,87,255:40,0 chr1 214811282 . C . PASS END=214811312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:40:0,93,1355:0,95,255:40,0 chr1 214811313 . T . PASS END=214811313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:30,0 chr1 214811314 . C . PASS END=214811322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:30,0 chr1 214811323 . A . PASS END=214811323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr1 214811324 . A . PASS END=214811328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,92,255:31,0 chr1 214811329 . G . PASS END=214811329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 214811330 . C . PASS END=214811338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 214811339 . T . PASS END=214811344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:26,0 chr1 214813264 . C . PASS END=214813264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 214813265 . G . PASS END=214813268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:31,0 chr1 214813269 . A . PASS END=214813269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 214813270 . A . PASS END=214814021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:31:0,87,1172:0,87,255:40,0 chr1 214814022 . C . PASS END=214814058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:43:0,90,1529:0,90,255:40,0 chr1 214814059 . T G, 46.53 PASS DP=43;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=2.273;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,17,0:0.395,0.000:43:11,8,0:15,9,0:46:81,0,50,608,872,1480:255,0,255:23,0:4.6532e+01,1.1830e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,12,6,11:11,15,9,8 chr1 214814060 . G . PASS END=214814096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,105,1352:0,107,255:40,0 chr1 214814097 . A . PASS END=214814526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:32:0,84,1252:0,88,255:40,0 chr1 214814527 . A . PASS END=214814528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 214814529 . A . PASS END=214814533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,102,255:31,0 chr1 214814534 . A . PASS END=214814545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 214814546 . G . PASS END=214814546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:25,0 chr1 214814547 . A . PASS END=214814547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,861:0,73,255:26,0 chr1 214814548 . A . PASS END=214814556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 214814557 . G . PASS END=214814557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:29,0 chr1 214814558 . T . PASS END=214814570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 214814571 . C T, 47.68 PASS DP=32;MQ=250.00;MQRankSum=4.719;ReadPosRankSum=2.609;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,13,0:0.406,0.000:32:11,5,0:8,8,0:47:82,0,50,465,641,1106:255,0,255:18,0:4.7681e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,9,4:12,7,5,8 chr1 214814572 . T . PASS END=214814574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 214814575 . A . PASS END=214814575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr1 214814576 . T . PASS END=214814577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 214814578 . A . PASS END=214814580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:29,0 chr1 214814581 . G . PASS END=214814584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 214814585 . A . PASS END=214814585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 214814586 . A . PASS END=214814595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1235:0,90,255:35,0 chr1 214814596 . T . PASS END=214814596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:32,0 chr1 214814597 . G . PASS END=214814608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,101,1425:0,101,255:39,0 chr1 214814609 . T . PASS END=214815266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:39:0,84,1205:0,84,255:40,0 chr1 214815267 . C . PASS END=214815303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,159,255:40,0 chr1 214815304 . C T, 47.63 PASS DP=55;MQ=250.00;MQRankSum=6.271;ReadPosRankSum=2.346;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,23,0:0.418,0.000:55:14,12,0:18,11,0:47:82,0,50,785,1133,1917:255,0,255:26,0:4.7627e+01,9.6815e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,18,8,15:14,18,9,14 chr1 214815305 . G . PASS END=214815341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,115,1800:0,115,255:40,0 chr1 214815342 . G . PASS END=214815986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1164:0,83,255:40,1 chr1 214815987 . C . PASS END=214815988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 214815989 . G . PASS END=214816000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:38:0,90,1350:0,110,255:35,0 chr1 214816001 . C . PASS END=214816001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1213:0,67,255:33,0 chr1 214816002 . T . PASS END=214816139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:35:0,82,1310:0,82,255:40,0 chr1 214816140 . C . PASS END=214816141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:36:0,68,1205:0,68,255:34,0 chr1 214816142 . T . PASS END=214816142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 214816143 . A . PASS END=214816144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:34,0 chr1 214816145 . C . PASS END=214816145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 214816146 . A . PASS END=214816146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:30,0 chr1 214816147 . G . PASS END=214816174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1193:0,89,255:35,0 chr1 214816175 . T . PASS END=214816175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:32,0 chr1 214816176 . C . PASS END=214816186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:34,0 chr1 214816187 . G . PASS END=214816195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1263:0,89,255:32,0 chr1 214816196 . T . PASS END=214816196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:32,0 chr1 214816197 . A . PASS END=214816223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:35:0,86,1278:0,86,255:36,0 chr1 214816224 . G A, 46.05 PASS DP=35;MQ=249.80;MQRankSum=4.820;ReadPosRankSum=1.843;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,13,0:0.382,0.000:34:11,7,0:10,6,0:45:81,0,50,465,712,1177:255,0,255:20,0:4.6047e+01,1.2969e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,5,8:9,12,5,8 chr1 214816225 . C . PASS END=214816225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:32,0 chr1 214816226 . T . PASS END=214816226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:31,0 chr1 214816227 . G . PASS END=214816261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:89:35:0,89,1194:0,89,255:40,0 chr1 214816262 . T . PASS END=214816332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1305:0,99,255:40,0 chr1 214816333 . A . PASS END=214816333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:33,0 chr1 214816334 . G . PASS END=214816363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1350:0,98,255:34,0 chr1 214816364 . G . PASS END=214816364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 214816365 . T . PASS END=214816390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,88,255:35,0 chr1 214816391 . G . PASS END=214816391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 214816392 . G . PASS END=214816392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 214816393 . A . PASS END=214816396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:26,0 chr1 214816397 . T . PASS END=214816398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 214816399 . A . PASS END=214816399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 214816400 . A . PASS END=214816428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:32,0 chr1 214816429 . A . PASS END=214816429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:45:32:0,45,798:0,45,255:28,0 chr1 214816430 . G . PASS END=214816642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:31:0,82,1008:0,82,255:40,0 chr1 214816643 . T . PASS END=214816643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1046:0,60,255:28,0 chr1 214816644 . T . PASS END=214816654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 214816655 . C . PASS END=214816668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:27:0,60,900:0,71,255:26,0 chr1 214817900 . G . PASS END=214818185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:37:0,80,1282:0,80,255:40,0 chr1 214818186 . T . PASS END=214818222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:53:0,120,1800:0,129,255:40,0 chr1 214818223 . T A, 50.00 PASS DP=55;MQ=250.00;MQRankSum=6.347;ReadPosRankSum=5.116;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,29,0:0.527,0.000:55:13,20,0:13,9,0:48:85,0,50,1000,910,1911:255,0,255:22,0:5.0000e+01,6.6269e-05,5.2780e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,7,15,14:14,12,14,15 chr1 214818224 . A . PASS END=214818260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,119,1527:0,119,255:40,0 chr1 214818261 . A . PASS END=214818603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:83:40:0,83,1392:0,83,255:40,0 chr1 214818604 . T . PASS END=214818604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1464:0,78,255:40,0 chr1 214818605 . C . PASS END=214818808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:93:44:0,93,1509:0,93,255:40,0 chr1 214818809 . G . PASS END=214818809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1380:0,58,255:34,0 chr1 214818810 . A . PASS END=214819456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:35:0,85,1241:0,85,255:40,0 chr1 214819457 . G . PASS END=214819457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr1 214819458 . C . PASS END=214819797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:36:0,90,1350:0,102,255:40,0 chr1 214819798 . A . PASS END=214819799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:71:42:0,71,1341:0,71,255:37,0 chr1 214819800 . A . PASS END=214819800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1438:0,109,255:38,0 chr1 214819801 . G . PASS END=214819801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:43:42:0,43,1111:0,43,255:35,0 chr1 214819802 . C . PASS END=214819860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1150:0,87,255:40,0 chr1 214819861 . G . PASS END=214819861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:5:35:0,5,928:0,5,255:28,0 chr1 214819862 . C . PASS END=214819887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1225:0,89,255:35,0 chr1 214819888 . G . PASS END=214819888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr1 214819889 . G . PASS END=214819894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 214819895 . G . PASS END=214819895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 214819896 . A . PASS END=214819915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1075:0,85,255:32,0 chr1 214819916 . A . PASS END=214819917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 214819918 . G . PASS END=214819920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:27,0 chr1 214819921 . T . PASS END=214819924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,77,255:25,0 chr1 214819925 . G . PASS END=214819946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 214819947 . T . PASS END=214819948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 214819949 . G . PASS END=214819954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr1 214819955 . G . PASS END=214819955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:25,0 chr1 214819956 . C . PASS END=214819956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 214819957 . C . PASS END=214819961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 214819962 . C . PASS END=214819963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:23,0 chr1 214819964 . A . PASS END=214820061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,988:0,87,255:40,0 chr1 214820062 . G . PASS END=214820098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,134,255:40,0 chr1 214820099 . A G, 48.76 PASS DP=52;MQ=250.00;MQRankSum=6.135;ReadPosRankSum=3.501;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,23,0:0.442,0.000:52:11,11,0:18,12,0:47:84,0,50,791,1029,1820:255,0,255:29,0:4.8758e+01,7.9471e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,8,16,7:15,14,12,11 chr1 214820100 . A . PASS END=214820136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,148,255:40,0 chr1 214820137 . A . PASS END=214820231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,122,255:40,0 chr1 214820232 . T . PASS END=214820268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,114,1756:0,114,255:40,0 chr1 214820269 . G . LowGQ END=214820269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,12:52:0:52:0,0,1047:44,0,255:37,0 chr1 214820270 . A . PASS END=214820270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr1 214820271 . G . LowGQ END=214820271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,9:50:0:50:0,0,1156:22,0,255:39,0 chr1 214820272 . AGTGG A, 0.09 DRAGENIndelHardQUAL DP=48;MQ=250.00;MQRankSum=4.159;ReadPosRankSum=-0.887;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:39,7,0:0.152,0.000:46:22,5,0:17,2,0:17:12,0,50,172,1540,1712:0,110,255:40,0:8.5476e-02,1.7102e+01,7.0102e+01,1.9471e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:22,17,0,7:25,14,2,5 chr1 214820273 . G . LowGQ END=214820275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,15:47:0:47:0,0,756:42,0,255:36,0 chr1 214820276 . G GCACC,GCACACC, 0.14 DRAGENIndelHardQUAL DP=47;MQ=250.00;FractionInformativeReads=0.936 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:38,6,0,0:0.136,0.000,0.000:44:21,4,0,0:17,2,0,0:15:14,0,50,155,1490,205,144,1466,1630,1602:40,0,255:33,0:1.4083e-01,1.4961e+01,6.7961e+01,1.7039e+02,4.5000e+02,2.2339e+02,1.6501e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,29.00,58.00,32.00,34.77,63.77,63.77,37.77:18,20,0,6:23,15,2,4 chr1 214820277 . C . PASS END=214820278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,138,255:40,0 chr1 214820279 . G . LowGQ END=214820279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,9:46:0:46:0,0,1017:34,0,255:32,0 chr1 214820280 . C . PASS END=214820316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:38:0,85,1336:0,85,255:40,0 chr1 214820317 . G . PASS END=214820339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,98,255:37,0 chr1 214820340 . A . PASS END=214820340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:31,0 chr1 214820341 . G . PASS END=214820743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1125:0,80,255:40,0 chr1 214821310 . T . PASS END=214821322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,215,255:40,0 chr1 214821828 . G . PASS END=214821841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,3:80:99:79:0,120,1800:0,191,255:40,0 chr1 214822018 . G . PASS END=214822170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,100,1620:0,100,255:40,2 chr1 214825053 . G . PASS END=214825146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,114,1698:0,114,255:40,0 chr1 214825147 . G . LowGQ END=214825147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,13:71:0:71:0,0,1711:61,0,255:40,0 chr1 214825148 . A . PASS END=214825148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:70:0,120,1800:0,177,255:40,0 chr1 214825149 . G . PASS END=214825149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,9:70:17:70:0,17,1815:0,17,255:40,0 chr1 214825150 . A . PASS END=214825150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,193,255:40,0 chr1 214825151 . G . LowGQ END=214825151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,10:70:0:70:0,0,1655:8,0,255:40,0 chr1 214825152 . G . PASS END=214825155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:93:67:0,93,1800:0,93,255:40,0 chr1 214825156 . T . LowGQ END=214825156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,12:66:0:66:0,0,1351:39,0,255:40,0 chr1 214825157 . A . PASS END=214825160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,164,255:40,0 chr1 214825161 . G . PASS END=214825161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,9:66:26:66:0,26,1627:0,26,255:40,0 chr1 214825162 . A . PASS END=214825163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,195,255:40,0 chr1 214825164 . T . PASS END=214825164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:75:66:0,75,1762:0,75,255:40,0 chr1 214825165 . A . PASS END=214825229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:49:0,81,1705:0,81,255:40,0 chr1 214826171 . T . PASS END=214826195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,137,255:40,0 chr1 214826196 . G A, 45.51 PASS DP=58;MQ=250.00;MQRankSum=6.303;ReadPosRankSum=-1.090;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,22,0:0.386,0.000:57:17,10,0:18,12,0:45:80,0,50,770,1252,2022:255,0,255:34,0:4.5514e+01,1.4367e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,21,14,8:16,19,10,12 chr1 214826197 . A . PASS END=214826233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,149,255:40,0 chr1 214826234 . C . PASS END=214826332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,120,1800:0,131,255:40,0 chr1 214826828 . G . PASS END=214826836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,3:81:99:80:0,120,1800:0,193,255:40,0 chr1 214828584 . A . PASS END=214828584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr1 214828585 . T . PASS END=214828589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1032:0,84,255:29,0 chr1 214828590 . A . PASS END=214828590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 214828591 . A . PASS END=214828746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:98:34:0,98,1264:0,98,255:40,0 chr1 214830276 . G . PASS END=214830487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,120,1800:0,125,255:40,0 chr1 214830488 . T . PASS END=214830488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:74:60:0,74,1548:0,74,255:40,0 chr1 214830489 . C . PASS END=214830579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:59:0,115,1800:0,115,255:40,0 chr1 214830580 . C . PASS END=214830616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,150,255:40,0 chr1 214830617 . A G, 45.70 PASS DP=59;MQ=249.93;MQRankSum=6.427;ReadPosRankSum=3.458;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,23,0:0.390,0.000:59:15,10,0:21,13,0:45:80,0,50,794,1251,2045:255,0,255:31,0:4.5696e+01,1.3875e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,22,9,14:19,17,12,11 chr1 214830618 . G . PASS END=214830654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,130,255:40,0 chr1 214830655 . A . PASS END=214830712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1296:0,81,255:40,0 chr1 214830713 . G . PASS END=214830713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:27,0 chr1 214830714 . A . PASS END=214830718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:29,0 chr1 214830719 . G . PASS END=214830719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 214830720 . A . PASS END=214830725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr1 214830726 . A . PASS END=214830726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 214830727 . G . PASS END=214830727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 214830728 . G . PASS END=214830728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 214830729 . G . PASS END=214830733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 214830734 . C . PASS END=214830734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 214830735 . C . PASS END=214830736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 214830737 . G . PASS END=214830744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,73,255:24,0 chr1 214830745 . A . PASS END=214830745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:22,0 chr1 214830746 . A . PASS END=214830752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr1 214832193 . G . PASS END=214832194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:30,0 chr1 214832195 . T . PASS END=214832195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 214832196 . T . PASS END=214832365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1180:0,86,255:40,0 chr1 214832366 . C . PASS END=214832366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:25,0 chr1 214832367 . A . PASS END=214832369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:29,0 chr1 214832370 . A . PASS END=214832371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 214836934 . G . PASS END=214836936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 214836937 . A . PASS END=214836938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,674:0,57,255:19,0 chr1 214836939 . A . PASS END=214836940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 214836941 . T . PASS END=214836941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,572:0,2,255:17,0 chr1 214836942 . T . PASS END=214836942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 214836943 . G . PASS END=214836944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr1 214836945 . T . PASS END=214836945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 214836946 . C . PASS END=214836948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:24,0 chr1 214836949 . C . PASS END=214836949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,820:0,20,255:23,0 chr1 214836950 . G . PASS END=214836952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,892:0,36,255:25,0 chr1 214836953 . G . PASS END=214836955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr1 214836956 . C . PASS END=214836956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 214836957 . A . PASS END=214836958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr1 214836959 . T . PASS END=214836959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 214836960 . A . PASS END=214836964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:26,0 chr1 214836965 . C . PASS END=214837072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1086:0,80,255:36,0 chr1 214837073 . G . PASS END=214837090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1145:0,80,255:30,0 chr1 214837091 . A . PASS END=214837109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,945:0,62,255:26,0 chr1 214837110 . C G, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=1.914;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,15,0:0.600,0.000:25:4,8,0:6,7,0:47:85,0,48,536,358,894:255,0,255:10,0:5.0000e+01,7.9471e-05,5.0814e+01,4.5000e+02,3.9240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,6,9:4,6,5,10 chr1 214837111 . G . PASS END=214837111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 214837112 . G . PASS END=214837112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 214837113 . C . PASS END=214837115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 214837116 . T . PASS END=214837116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 214837117 . G . PASS END=214837119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 214837120 . A . PASS END=214837137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,615:0,40,255:18,0 chr1 215179265 . A . PASS END=215179298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:103:0,120,1800:0,255,255:40,0 chr1 215209694 . A . PASS END=215209697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,255,255:40,0 chr1 215256650 . A . PASS END=215256650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 215256729 . A . PASS END=215256739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:17,0 chr1 215256740 . C . PASS END=215256740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:15,0 chr1 215256741 . G . PASS END=215256742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 215256743 . C . PASS END=215256743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr1 215256744 . T . PASS END=215256759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr1 215256760 . G . PASS END=215256760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 215256761 . C . PASS END=215256762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 215256763 . A . PASS END=215256763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 215256764 . T . PASS END=215256764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 215256765 . A . PASS END=215256765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr1 215256766 . G . PASS END=215256768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 215256769 . C . PASS END=215256769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 215256770 . A . PASS END=215256772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr1 215256773 . A . PASS END=215256773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 215256774 . G . PASS END=215256774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 215259711 . T . PASS END=215260021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,996:0,81,255:40,0 chr1 215297976 . C . PASS END=215298091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:36:0,81,1215:0,91,255:40,0 chr1 215298092 . A . PASS END=215298093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:36:0,66,990:0,92,255:22,0 chr1 215342542 . G . PASS END=215342552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:34,0 chr1 215342553 . A . PASS END=215342553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr1 215342554 . T . PASS END=215342572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:36:0,101,1396:0,101,255:40,0 chr1 215342573 . C T, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=2.700;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,26,0:0.542,0.000:48:12,13,0:10,13,0:48:85,0,49,885,758,1643:255,0,255:22,0:5.0000e+01,6.8339e-05,5.2392e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,12,14:13,9,11,15 chr1 215342574 . G . PASS END=215342610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:48:0,120,1800:0,137,255:40,0 chr1 215342611 . T . PASS END=215342702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:52:0,100,1800:0,100,255:40,0 chr1 215345340 . A . PASS END=215345520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:32:0,80,1109:0,80,255:40,0 chr1 215345521 . T . PASS END=215345521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 215345522 . T . PASS END=215345526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:28,0 chr1 215368296 . G . PASS END=215368296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 215368297 . T . PASS END=215368297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 215368298 . G . PASS END=215368313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1164:0,83,255:32,0 chr1 215368314 . A . PASS END=215368314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr1 215368315 . T . PASS END=215368321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1217:0,96,255:34,0 chr1 215368322 . T . PASS END=215368323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1233:0,66,255:34,0 chr1 215368324 . C . PASS END=215368435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1260:0,90,255:40,0 chr1 215408171 . G . PASS END=215408177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 215408178 . A . PASS END=215408178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,634:0,43,255:19,0 chr1 215408179 . G . PASS END=215408190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:26:0,71,947:0,71,255:27,0 chr1 215408191 . C . PASS END=215408193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 215408194 . T . PASS END=215408194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 215408195 . G . PASS END=215408210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 215408211 . A . PASS END=215408211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1087:0,71,255:33,0 chr1 215408212 . C . PASS END=215408259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1183:0,89,255:39,0 chr1 215408260 . T . PASS END=215408260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr1 215408261 . T . PASS END=215408439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1393:0,93,255:40,0 chr1 215408440 . G . PASS END=215408440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:32,0 chr1 215408441 . C . PASS END=215408468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:35,0 chr1 215408469 . T . PASS END=215408470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 215408471 . A . PASS END=215408475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 215408476 . G . PASS END=215408483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1108:0,74,255:26,0 chr1 215408484 . A . PASS END=215408484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 215408485 . A . PASS END=215408488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:23,0 chr1 215741029 . A . PASS END=215741039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:13,0 chr1 215741040 . G . PASS END=215741052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 215741053 . T G, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=2.266;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,10,0:0.667,0.000:15:5,9,0:0,1,0:47:85,0,46,358,179,537:255,0,127:5,0:5.0000e+01,9.4226e-05,4.9310e+01,3.5770e+02,2.1361e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,6,4:4,1,5,5 chr1 215741054 . T . PASS END=215741089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr1 215741090 . A . PASS END=215741090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 215741091 . A . PASS END=215741091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 215741092 . C . PASS END=215741094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 215741095 . A . PASS END=215741095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 215741096 . A . PASS END=215741096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 215741097 . C . PASS END=215741097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 215741098 . G . PASS END=215741111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 215747129 . A . PASS END=215747182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:88:0,120,1800:0,192,255:40,0 chr1 215747416 . T . PASS END=215747461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:95:0,120,1800:0,255,255:40,0 chr1 215749244 . A . PASS END=215749317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,3:95:99:68:0,120,1800:0,183,255:40,0 chr1 215751013 . G . PASS END=215751071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:84:0,120,1800:0,215,255:40,0 chr1 215751334 . A . PASS END=215751424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:62:0,120,1800:0,179,255:40,0 chr1 215752343 . G . PASS END=215752480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:41:0,90,1350:0,119,255:40,0 chr1 215753252 . G . PASS END=215753317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,128,255:40,0 chr1 215753318 . A . PASS END=215753330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,127,255:40,0 chr1 215753331 . T . PASS END=215753331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:61:49:0,61,1607:0,61,255:33,0 chr1 215753332 . G . PASS END=215753337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:81:48:0,81,1215:0,98,255:36,0 chr1 215753338 . T . PASS END=215753338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:78:48:0,78,1170:0,144,255:26,0 chr1 215753339 . A . PASS END=215753340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:48:0,81,1215:0,128,255:27,0 chr1 215753341 . A . PASS END=215753342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:69:47:0,69,1035:0,141,255:23,0 chr1 215759838 . A . PASS END=215760028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:80:30:0,80,1133:0,80,255:40,2 chr1 215768698 . G . PASS END=215768813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:42:0,110,1551:0,110,255:40,0 chr1 215775209 . G . PASS END=215775296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,183,255:40,0 chr1 215775427 . A . PASS END=215775543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:44:0,93,1395:0,132,255:40,0 chr1 215777474 . G . PASS END=215777478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 215777479 . A . PASS END=215777479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 215777480 . G . PASS END=215777644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:31:0,93,1180:0,93,255:40,0 chr1 215781359 . T . PASS END=215781359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 215781360 . C . PASS END=215781514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:34:0,84,1274:0,84,255:40,0 chr1 215785167 . G . PASS END=215785207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:83:32:0,83,1256:0,83,255:40,0 chr1 215785208 . A . PASS END=215785209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr1 215785210 . A . PASS END=215785210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:63:48:0,63,1340:0,63,255:40,0 chr1 215785211 . G . PASS END=215785244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:41:0,88,1355:0,88,255:40,0 chr1 215785245 . T . LowGQ END=215785245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,9:39:0:39:0,0,806:55,0,255:27,0 chr1 215785246 . C . PASS END=215785251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:38:0,80,988:0,80,255:36,0 chr1 215785252 . G . PASS END=215785252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr1 215785253 . A . PASS END=215785255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,102,1530:0,108,255:35,0 chr1 215785256 . G . PASS END=215785256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr1 215785257 . G . PASS END=215785263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:34,0 chr1 215791430 . T . PASS END=215791478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,122,255:40,0 chr1 215792228 . A . PASS END=215792228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 215792229 . A . PASS END=215792237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,884:0,66,255:23,0 chr1 215792238 . A . PASS END=215792238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 215792239 . T . PASS END=215792251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,824:0,62,255:26,0 chr1 215792252 . C . PASS END=215792412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:27:0,81,994:0,81,255:40,0 chr1 215792495 . A . PASS END=215792633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:81:38:0,81,1340:0,81,255:40,0 chr1 215793399 . C . PASS END=215793796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:30:0,90,1086:0,90,255:40,0 chr1 215793797 . G . PASS END=215793833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:98:76:0,98,1800:0,98,255:40,0 chr1 215793834 . G A, 45.64 PASS DP=81;MQ=250.00;MQRankSum=7.496;ReadPosRankSum=1.748;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,31,0:0.388,0.000:80:27,15,0:22,16,0:45:80,0,50,1108,1722,2831:255,0,255:40,0:4.5644e+01,1.4005e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,32,9,22:21,28,19,12 chr1 215793835 . T . PASS END=215793871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,184,255:40,0 chr1 215793872 . C . PASS END=215793948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:41:0,84,1260:0,107,255:40,0 chr1 215793949 . T . PASS END=215793949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 215793950 . A . PASS END=215793950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 215793951 . C . PASS END=215793960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:25,0 chr1 215799123 . T . PASS END=215799213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,161,255:40,0 chr1 215802156 . C . PASS END=215802157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 215802158 . G . PASS END=215802356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:27:0,80,1015:0,80,255:40,0 chr1 215802357 . A . PASS END=215802357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:31,0 chr1 215802358 . A . PASS END=215802361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1158:0,96,255:33,0 chr1 215802362 . T . PASS END=215802363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:60:33:0,60,1109:0,60,255:32,0 chr1 215802364 . G . PASS END=215802374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1197:0,82,255:33,0 chr1 215802375 . C . PASS END=215802377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr1 215803531 . C . PASS END=215803540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1103:0,81,255:36,0 chr1 215803541 . A . PASS END=215803541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 215803542 . T . PASS END=215803602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:38:0,93,1497:0,93,255:40,0 chr1 215807800 . C . PASS END=215807800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 215807801 . C . PASS END=215807803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1019:0,51,255:29,0 chr1 215807804 . A . PASS END=215807821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1102:0,83,255:33,0 chr1 215807822 . G . PASS END=215807822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr1 215807823 . T . PASS END=215807823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 215807824 . A . PASS END=215807824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1224:0,50,255:33,0 chr1 215807825 . A . PASS END=215807826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1015:0,69,255:35,0 chr1 215807827 . C . PASS END=215807827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:34,0 chr1 215807828 . A . PASS END=215807828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 215807829 . T . PASS END=215807829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr1 215807830 . T . PASS END=215807830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 215807831 . C . PASS END=215807832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1321:0,72,255:37,0 chr1 215807833 . A . PASS END=215807833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:23:39:0,23,1173:0,23,255:36,0 chr1 215807834 . T . PASS END=215807834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1312:0,40,255:37,0 chr1 215807835 . G . PASS END=215807836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1435:0,82,255:39,0 chr1 215807837 . A . PASS END=215807837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1343:0,65,255:38,0 chr1 215807838 . G . PASS END=215807843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:81:40:0,81,1381:0,81,255:40,0 chr1 215807844 . C . PASS END=215807844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:40,0 chr1 215807845 . T . PASS END=215807851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:94:44:0,94,1598:0,94,255:40,0 chr1 215807852 . A . PASS END=215807852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:34:48:0,34,1587:0,34,255:40,0 chr1 215807853 . A . PASS END=215807854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:89:48:0,89,1653:0,89,255:40,0 chr1 215807855 . A . PASS END=215807855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1461:0,58,255:40,0 chr1 215807856 . G . PASS END=215808012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:36:0,93,1395:0,95,255:40,0 chr1 215808013 . C . PASS END=215808013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1233:0,61,255:30,0 chr1 215808014 . C . PASS END=215808019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1178:0,83,255:32,0 chr1 215808020 . T . PASS END=215808020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:26,0 chr1 215808021 . T . PASS END=215808022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 215808023 . C . PASS END=215808023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:26,0 chr1 215808024 . C . PASS END=215808024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 215808025 . C . PASS END=215808045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:26:0,60,906:0,60,255:26,0 chr1 215812489 . T . PASS END=215812489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 215812496 . C . PASS END=215812581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,139,255:40,0 chr1 215813898 . A . PASS END=215813900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:18,0 chr1 215813901 . T . PASS END=215813902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 215813903 . T . PASS END=215813910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr1 215813911 . G . PASS END=215813923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:26,0 chr1 215813924 . A . PASS END=215814074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1215:0,84,255:40,0 chr1 215814075 . C . PASS END=215814076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1131:0,77,255:26,0 chr1 215814078 . T . PASS END=215814078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 215820859 . C . PASS END=215820860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 215820862 . A . PASS END=215820866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 215820867 . C . PASS END=215820893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:17,0 chr1 215820894 . C . PASS END=215820894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 215820895 . G . PASS END=215820908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,643:0,51,255:19,0 chr1 215820909 . C . PASS END=215820909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 215820910 . C . PASS END=215820910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:19,0 chr1 215820911 . A . PASS END=215820923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:22:0,62,778:0,62,255:26,0 chr1 215820924 . C . PASS END=215820925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 215820926 . A . PASS END=215820946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,953:0,65,255:26,0 chr1 215820947 . G . PASS END=215820949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 215820950 . T . PASS END=215820951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 215820952 . G . PASS END=215820970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 215820971 . C . PASS END=215820971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 215820972 . T . PASS END=215820988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1072:0,90,255:30,0 chr1 215820989 . C . PASS END=215820989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 215820990 . C . PASS END=215821013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,955:0,81,255:28,0 chr1 215821014 . T . PASS END=215821032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,76,255:26,0 chr1 215821033 . T . PASS END=215821033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 215821034 . G . PASS END=215821035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 215821036 . G . PASS END=215821057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr1 215821058 . A . PASS END=215821069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:15:0,34,540:0,34,255:13,0 chr1 215821070 . T . PASS END=215821072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 215821869 . C . PASS END=215821908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,509:0,45,255:17,0 chr1 215821909 . C . PASS END=215821909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 215821910 . G . PASS END=215821945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,480:0,42,255:19,0 chr1 215821946 . G . PASS END=215821947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 215821948 . G . PASS END=215821948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 215821949 . G . PASS END=215821950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 215821951 . G . PASS END=215821964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 215821965 . G . PASS END=215821965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr1 215821966 . G . PASS END=215821982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:17,0 chr1 215821983 . T . PASS END=215821983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 215821984 . C . PASS END=215822066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,587:0,41,255:19,0 chr1 215822067 . A . PASS END=215822088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr1 215822089 . G . PASS END=215822092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:8,0 chr1 215822093 . C . PASS END=215822103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:8:0,15,225:0,24,255:6,0 chr1 215822104 . G . PASS END=215822105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 215822106 . T . PASS END=215822109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 215823934 . C . PASS END=215823935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 215823936 . C . PASS END=215823957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,712:0,44,255:19,0 chr1 215823958 . G . PASS END=215823964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 215823965 . A . PASS END=215823965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 215823966 . A . PASS END=215823986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:26,0 chr1 215823987 . T . PASS END=215823987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 215823988 . C . PASS END=215823994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:26,0 chr1 215823995 . G . PASS END=215824003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 215824004 . G . PASS END=215824004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr1 215824005 . G . PASS END=215824021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1194:0,83,255:31,0 chr1 215824022 . A . PASS END=215824022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 215824023 . C . PASS END=215824026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 215824027 . T . PASS END=215824040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:26:0,74,1062:0,74,255:26,0 chr1 215824041 . T . PASS END=215824044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 215824045 . A . PASS END=215824045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 215824046 . T . PASS END=215824064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr1 215824065 . G . PASS END=215824065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 215824066 . A . PASS END=215824080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 215824081 . T . PASS END=215824084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:24,0 chr1 215824085 . C . PASS END=215824103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:41:19:0,41,630:0,41,255:19,0 chr1 215824104 . A . PASS END=215824122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,458:0,39,255:13,0 chr1 215824123 . T . PASS END=215824123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 215824124 . G . PASS END=215824132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 215824133 . A . PASS END=215824143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,360:0,22,255:9,0 chr1 215844314 . C . PASS END=215844596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:95:36:0,95,1283:0,95,255:40,1 chr1 215844597 . C . PASS END=215844598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:38:0,75,1125:0,76,255:25,0 chr1 215844599 . T . PASS END=215844600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,120,255:27,0 chr1 215844601 . C . PASS END=215844617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:26,0 chr1 215844618 . T . PASS END=215844618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 215844619 . G . PASS END=215844619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 215844620 . A . PASS END=215844620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr1 215844621 . A . PASS END=215844625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr1 215844626 . T . PASS END=215844636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,53,255:19,0 chr1 215847293 . G . PASS END=215847293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 215847440 . A . PASS END=215847453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,112,1499:0,112,255:40,0 chr1 215847454 . T . PASS END=215847454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1496:0,77,255:40,0 chr1 215847455 . T . PASS END=215848005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:87:35:0,87,1305:0,98,255:40,0 chr1 215848006 . T . PASS END=215848006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:29,0 chr1 215848007 . G . PASS END=215848012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,92,255:30,0 chr1 215848013 . A . PASS END=215848013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1109:0,47,255:27,0 chr1 215848014 . A . PASS END=215848018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1241:0,86,255:30,0 chr1 215848019 . G . PASS END=215848019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:28,0 chr1 215848020 . C . PASS END=215848024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:28,0 chr1 215848025 . G . PASS END=215848025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr1 215848026 . G . PASS END=215848034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:30,0 chr1 215848035 . C . PASS END=215848035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 215848036 . A . PASS END=215848060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:30:0,80,1133:0,80,255:31,0 chr1 215848061 . A . PASS END=215848061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 215848062 . C T, 50.00 PASS DP=31;MQ=247.91;MQRankSum=4.704;ReadPosRankSum=3.672;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:9,10,0:5,7,0:48:85,0,49,579,464,1043:255,0,255:12,0:5.0000e+01,6.8598e-05,5.2351e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,11,6:6,8,10,7 chr1 215848063 . T . PASS END=215848063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr1 215848064 . C . PASS END=215848064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 215848065 . T . PASS END=215848065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 215848066 . T . PASS END=215848066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 215848067 . T . PASS END=215848067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 215848068 . A . PASS END=215848072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:29,0 chr1 215848073 . C . PASS END=215848073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 215848074 . A . PASS END=215848074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 215848075 . T . PASS END=215848075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:27,0 chr1 215848076 . A . PASS END=215848093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,927:0,81,255:28,0 chr1 215848094 . T . PASS END=215848097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,946:0,64,255:27,0 chr1 215848098 . C . PASS END=215848099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 215848100 . T . PASS END=215848105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr1 215848106 . T . PASS END=215848106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:29,0 chr1 215848107 . T . PASS END=215848107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 215848108 . T . PASS END=215848108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr1 215848109 . G . PASS END=215848112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 215848113 . T . PASS END=215848113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 215848114 . G . PASS END=215848123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:34:0,87,1241:0,89,255:32,0 chr1 215848124 . A . PASS END=215848124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:27,0 chr1 215848125 . C . PASS END=215848202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1097:0,82,255:35,0 chr1 215848203 . T . PASS END=215848203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1181:0,66,255:34,0 chr1 215848204 . G . PASS END=215848204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:34,0 chr1 215848205 . T . PASS END=215848205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1123:0,55,255:32,0 chr1 215848206 . G . PASS END=215848218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1169:0,86,255:36,0 chr1 215848219 . T . PASS END=215848219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:34,0 chr1 215848220 . T . PASS END=215848549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:38:0,107,1374:0,107,255:40,0 chr1 215848550 . G . PASS END=215848586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,155,255:40,0 chr1 215848587 . T C, 49.75 PASS DP=59;MQ=250.00;MQRankSum=6.580;ReadPosRankSum=3.681;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,28,0:0.475,0.000:59:16,9,0:15,19,0:48:85,0,50,936,1064,2000:255,0,255:29,0:4.9746e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,16,17,11:16,15,10,18 chr1 215848588 . G . PASS END=215848640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:57:0,120,1800:0,136,255:40,0 chr1 215848641 . T C, 50.00 PASS DP=61;MQ=249.37;MQRankSum=5.856;ReadPosRankSum=3.878;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,32,0:0.525,0.000:61:15,11,0:14,21,0:48:85,0,50,1079,956,2034:255,0,255:27,0:5.0000e+01,6.6269e-05,5.2789e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,16,16:14,15,15,17 chr1 215848642 . G . PASS END=215848678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:61:0,120,1800:0,150,255:40,0 chr1 215848679 . G . PASS END=215848766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:35:0,81,1215:0,89,255:40,0 chr1 215848767 . A . PASS END=215848767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:26,0 chr1 215848768 . G . PASS END=215848796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1202:0,83,255:32,0 chr1 215848797 . T . PASS END=215848797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:27,0 chr1 215848798 . T . PASS END=215848950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1260:0,95,255:40,0 chr1 215848951 . T . PASS END=215848951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:31,0 chr1 215848952 . T . PASS END=215848958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:31,0 chr1 215848960 . T . PASS END=215848961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 215853490 . C . PASS END=215853490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 215853491 . C . PASS END=215853689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:31:0,81,1119:0,93,255:40,0 chr1 215853690 . C . PASS END=215853694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,92,255:23,0 chr1 215853695 . C . PASS END=215853698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:42:32:0,42,630:0,92,255:17,0 chr1 215853699 . T . PASS END=215853703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:30:25:0,30,450:0,74,255:12,0 chr1 215853704 . T . PASS END=215853706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:30:23:0,30,450:0,69,255:10,0 chr1 215853707 . A . PASS END=215853708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:21:23:0,21,315:0,69,255:7,0 chr1 215853709 . G . PASS END=215853720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:15:15:0,15,225:0,45,255:6,0 chr1 215853722 . T . PASS END=215853722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:15:15:0,15,225:0,45,255:5,0 chr1 215901372 . C . PASS END=215901381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr1 215901382 . A . PASS END=215901382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 215901383 . A . PASS END=215901633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:29:0,86,1064:0,86,255:40,2 chr1 215901634 . A . PASS END=215901634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1644:0,75,255:40,2 chr1 215901635 . A . PASS END=215901716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,87,255:40,0 chr1 215901717 . A . PASS END=215901717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 215901718 . G . PASS END=215901721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 215901722 . G . PASS END=215901726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1035:0,71,255:25,0 chr1 215901728 . T . PASS END=215901728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 215914717 . C . PASS END=215914840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:80:45:0,80,1548:0,80,255:40,0 chr1 215914841 . G . PASS END=215914880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,104,255:40,0 chr1 215916517 . A . PASS END=215916517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr1 215916519 . C . PASS END=215916521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:32,0 chr1 215916522 . T . PASS END=215916522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,969:0,79,255:31,0 chr1 215916523 . T . PASS END=215916678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:95:32:0,95,1135:0,95,255:40,0 chr1 215931934 . T . PASS END=215931968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:85:46:0,85,1495:0,85,255:40,0 chr1 215931969 . G . PASS END=215932094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:57:0,120,1800:0,165,255:40,0 chr1 215933001 . C . PASS END=215933187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:83:41:0,83,1575:0,83,255:40,0 chr1 215940022 . C . PASS END=215940029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr1 215940030 . A . PASS END=215940030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:26,0 chr1 215940031 . G . PASS END=215940130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1094:0,87,255:40,0 chr1 215953185 . C . PASS END=215953185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 215953186 . T . PASS END=215953186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 215953187 . G . PASS END=215953384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,1215:0,84,255:40,1 chr1 215955384 . C . PASS END=215955387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr1 215955388 . C . PASS END=215955388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 215955389 . T . PASS END=215955540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1139:0,80,255:40,0 chr1 215956080 . C . PASS END=215956253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:40:0,90,1350:0,104,255:40,0 chr1 215956254 . T . PASS END=215956266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:26:0,66,990:0,78,255:26,0 chr1 215956267 . G . PASS END=215956272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:21,0 chr1 215956273 . C . PASS END=215956274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr1 215956275 . C . PASS END=215956279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:20:0,39,585:0,60,255:13,0 chr1 215956283 . A . PASS END=215956283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr1 215958622 . G . PASS END=215958622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 215960007 . G . PASS END=215960007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 215960012 . C . PASS END=215960013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 215960014 . G . PASS END=215960129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:31:0,85,1089:0,85,255:40,0 chr1 215960130 . G . PASS END=215960166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:40:0,96,1440:0,107,255:40,0 chr1 215960167 . T G, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=3.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:6,10,0:13,11,0:48:85,0,50,735,668,1403:255,0,255:17,0:5.0000e+01,6.6269e-05,5.2786e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,4,17:7,12,11,10 chr1 215960168 . C . PASS END=215960194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,96,255:34,0 chr1 215960195 . G . PASS END=215960204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 215960205 . C . PASS END=215960216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:23,0 chr1 215960218 . T . PASS END=215960218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 215963396 . A . PASS END=215963396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,99,1518:0,99,255:40,0 chr1 215963401 . C . PASS END=215963613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:41:0,81,1215:0,84,255:40,0 chr1 215963614 . A . PASS END=215963625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:29:0,69,1035:0,69,255:25,0 chr1 215967783 . T . PASS END=215967783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 215972241 . C . PASS END=215972241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 215972249 . C . PASS END=215972467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:33:0,81,1215:0,99,255:40,0 chr1 215987078 . C . PASS END=215987081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 215987082 . T . PASS END=215987082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 215987083 . A . PASS END=215987084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 215987085 . A . PASS END=215987087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr1 215987088 . T . PASS END=215987176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1095:0,82,255:40,0 chr1 215987177 . A . PASS END=215987177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1255:0,71,255:40,0 chr1 215987178 . C . PASS END=215987215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:42:0,84,1260:0,93,255:40,0 chr1 215987216 . T . PASS END=215987224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:31:0,69,1035:0,93,255:25,0 chr1 215987225 . A . PASS END=215987225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,990:0,43,255:20,0 chr1 215987226 . G . PASS END=215987226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 215987227 . A . PASS END=215987246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,675:0,42,255:23,0 chr1 215987248 . T . PASS END=215987248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 215990338 . C . PASS END=215990341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 215990342 . A . PASS END=215990342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 215990343 . G . PASS END=215990347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1080:0,87,255:31,0 chr1 215990348 . A . PASS END=215990348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr1 215990349 . G . PASS END=215990538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:34:0,88,1176:0,88,255:40,0 chr1 215990541 . C . PASS END=215990541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 216009682 . C . PASS END=216009682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 216011332 . C . PASS END=216011445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:38:0,102,1530:0,114,255:40,0 chr1 216017633 . A . PASS END=216017633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 216017635 . C . PASS END=216017820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:30:0,90,1080:0,90,255:40,0 chr1 216017821 . G . PASS END=216017821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:30,0 chr1 216017822 . A . PASS END=216017836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1202:0,86,255:32,0 chr1 216017837 . C . PASS END=216017838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:32:0,78,1170:0,86,255:26,0 chr1 216017840 . T . PASS END=216017840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 216019164 . A . PASS END=216019169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,955:0,65,255:26,0 chr1 216019170 . A . PASS END=216019275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:27:0,81,950:0,81,255:40,0 chr1 216019276 . T . PASS END=216019312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,188,255:40,0 chr1 216019313 . T . LowGQ END=216019313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,20:70:0:70:0,0,1246:179,0,255:40,0 chr1 216019314 . T . PASS END=216019315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,4:70:99:70:0,120,1800:0,142,255:40,0 chr1 216019316 . A . LowGQ END=216019316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,11:71:0:71:0,0,1669:7,0,255:40,0 chr1 216019317 . G . PASS END=216019319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,3:71:99:71:0,120,1800:0,162,255:40,0 chr1 216019320 . A . PASS END=216019320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,9:70:46:70:0,46,1807:0,46,255:40,0 chr1 216019321 . G . PASS END=216019323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,4:68:99:68:0,120,1800:0,136,255:40,0 chr1 216019324 . G . PASS END=216019324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,11:68:21:68:0,21,1689:0,21,255:40,0 chr1 216019325 . A . PASS END=216019327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,102,1800:0,102,255:40,0 chr1 216019328 . T . LowGQ END=216019328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,15:67:0:67:0,0,1492:135,0,255:40,0 chr1 216019329 . C . PASS END=216019329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,8:67:68:67:0,68,1901:0,68,255:40,0 chr1 216019330 . C . PASS END=216019336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,179,255:40,1 chr1 216019337 . G . LowGQ END=216019337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,15:65:0:65:0,0,1401:76,0,255:40,0 chr1 216019338 . T . PASS END=216019348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:88:58:0,88,1759:0,88,255:40,0 chr1 216019349 . C . LowGQ END=216019349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,12:55:0:55:0,0,1352:84,0,255:35,0 chr1 216019350 . A . PASS END=216019352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:53:0,92,1617:0,92,255:40,0 chr1 216019353 . T . LowGQ END=216019353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,7:51:0:51:0,0,1283:50,0,255:38,0 chr1 216019354 . T . PASS END=216019354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1645:0,78,255:40,0 chr1 216019355 . C . LowGQ END=216019355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,8:50:0:50:0,0,1377:19,0,255:36,0 chr1 216019356 . A . PASS END=216019359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:49:0,91,1526:0,91,255:40,0 chr1 216019360 . T . PASS END=216019360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:27:46:0,27,1413:0,27,255:40,0 chr1 216019361 . G . PASS END=216019363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:45:0,85,1440:0,85,255:40,0 chr1 216019364 . G . PASS END=216019364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1443:0,63,255:32,0 chr1 216019365 . G . PASS END=216019365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,99,1485:0,102,255:33,0 chr1 216019366 . T . PASS END=216019370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:81:44:0,81,1215:0,82,255:31,0 chr1 216019371 . A . PASS END=216019371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1415:0,76,255:26,0 chr1 216019372 . A . PASS END=216019373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:81:44:0,81,1215:0,82,255:27,0 chr1 216019374 . A . PASS END=216019374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1164:0,28,255:26,0 chr1 216019375 . G . PASS END=216019375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,980:0,49,255:24,0 chr1 216019376 . C . PASS END=216019376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:34:0,75,1125:0,86,255:24,0 chr1 216019377 . T . LowGQ END=216019377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,853:64,0,255:21,0 chr1 216040339 . G . PASS END=216040339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 216040345 . T . PASS END=216040345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 216040348 . C . PASS END=216040349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 216040350 . T . PASS END=216040351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 216040352 . G . PASS END=216040484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:30:0,87,1078:0,90,255:40,0 chr1 216040485 . G . PASS END=216040493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,76,255:26,0 chr1 216040494 . A . PASS END=216040514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:19:0,43,645:0,43,255:19,0 chr1 216040517 . A . PASS END=216040517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 216040521 . T . PASS END=216040521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 216049418 . T . PASS END=216049418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 216051099 . C . PASS END=216051224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:49:0,120,1800:0,147,255:40,0 chr1 216051229 . C . PASS END=216051229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 216052101 . C . PASS END=216052101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 216052105 . C . PASS END=216052110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1311:0,95,255:39,0 chr1 216052111 . A . PASS END=216052111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1218:0,56,255:36,0 chr1 216052112 . T . PASS END=216052433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:36:0,87,1349:0,87,255:40,0 chr1 216052434 . A . PASS END=216052434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:34,0 chr1 216052435 . A . PASS END=216052440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:36,0 chr1 216052441 . C . PASS END=216052441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:33,0 chr1 216061767 . C . PASS END=216061780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,784:0,66,255:26,0 chr1 216061781 . G . PASS END=216061785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1062:0,84,255:30,0 chr1 216061786 . C . PASS END=216061786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 216061787 . A . PASS END=216061793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 216061794 . T . PASS END=216061794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 216061795 . C . PASS END=216061795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 216061796 . A . PASS END=216061796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 216061797 . C . PASS END=216061799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 216061800 . C . PASS END=216061800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 216061801 . A . PASS END=216061822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1103:0,80,255:36,0 chr1 216061823 . C . PASS END=216061823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr1 216061824 . G . PASS END=216061867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1169:0,80,255:35,0 chr1 216061868 . C . PASS END=216061869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 216061870 . T . PASS END=216061873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 216061874 . T . PASS END=216061874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1133:0,68,255:28,0 chr1 216061875 . G . PASS END=216061885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1192:0,83,255:36,0 chr1 216061886 . A . PASS END=216061886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr1 216061887 . T . PASS END=216062055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1271:0,81,255:40,0 chr1 216062056 . T . PASS END=216062056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:34,0 chr1 216062057 . T . PASS END=216062058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 216062059 . C . PASS END=216062059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr1 216062060 . C . PASS END=216062065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:34,0 chr1 216062066 . A . PASS END=216062066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:30,0 chr1 216062067 . T . PASS END=216062075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:33:0,90,1309:0,95,255:32,0 chr1 216062076 . A . PASS END=216062076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:30,0 chr1 216062077 . T . PASS END=216062084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:31,0 chr1 216062085 . T . PASS END=216062085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 216062086 . A . PASS END=216062116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:33,0 chr1 216062117 . T . PASS END=216062117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1156:0,75,255:30,0 chr1 216062118 . C . PASS END=216062127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1296:0,92,255:35,0 chr1 216062128 . T . PASS END=216062128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:33,0 chr1 216062129 . G . PASS END=216062399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:36:0,87,1305:0,104,255:40,0 chr1 216064536 . C . PASS END=216064536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 216064540 . T . PASS END=216064540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,154,255:40,0 chr1 216073414 . T . PASS END=216073414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 216073417 . T . PASS END=216073513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,117,1755:0,132,255:40,0 chr1 216073514 . A . PASS END=216073514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1246:0,79,255:32,0 chr1 216073515 . T . PASS END=216073515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr1 216073516 . C . PASS END=216073518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1201:0,62,255:33,0 chr1 216073519 . T . PASS END=216073534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,87,255:32,0 chr1 216073535 . C . PASS END=216073550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 216073551 . G . PASS END=216073551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:20,0 chr1 216073552 . A . PASS END=216073556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 216073557 . A . PASS END=216073559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr1 216073562 . G . PASS END=216073562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 216074094 . C . PASS END=216074094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 216074096 . C . PASS END=216074208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,101,1320:0,101,255:40,0 chr1 216074209 . T . PASS END=216074209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr1 216074210 . G . PASS END=216074235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:35,0 chr1 216074236 . C . PASS END=216074248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:25,0 chr1 216074253 . G . PASS END=216074253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 216107958 . C . PASS END=216108137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:45:0,109,1659:0,109,255:40,0 chr1 216138659 . C . PASS END=216138661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 216138662 . G . PASS END=216138664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 216138665 . C . PASS END=216138665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 216138666 . T . PASS END=216138666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 216138667 . A . PASS END=216138671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 216138672 . G . PASS END=216138673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 216138674 . A . PASS END=216138675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,913:0,70,255:28,0 chr1 216138676 . A . PASS END=216138725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:29:0,87,1035:0,87,255:37,0 chr1 216138726 . T . PASS END=216138726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:30,0 chr1 216138727 . G . PASS END=216138758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1303:0,92,255:36,0 chr1 216138759 . C . PASS END=216138760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1167:0,70,255:34,0 chr1 216138761 . G . PASS END=216138795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1170:0,83,255:33,0 chr1 216138796 . G . PASS END=216138806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,955:0,67,255:26,0 chr1 216138807 . A . PASS END=216138807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:22,0 chr1 216138808 . G . PASS END=216138809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:24,0 chr1 216138810 . T . PASS END=216138821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:26:0,48,720:0,78,255:18,0 chr1 216138831 . T . PASS END=216138831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 216143967 . C . PASS END=216144118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:30:0,90,1094:0,90,255:40,0 chr1 216144121 . G . PASS END=216144121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1535:0,110,255:39,0 chr1 216166167 . A . PASS END=216166167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 216166356 . A . PASS END=216166356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1388:0,101,255:38,0 chr1 216166361 . C . PASS END=216166488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,89,255:40,0 chr1 216166489 . G . PASS END=216166503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr1 216166504 . G . PASS END=216166509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:17,0 chr1 216172228 . C . PASS END=216172342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:61:0,120,1800:0,159,255:40,0 chr1 216172343 . T . PASS END=216172379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:35:0,90,1350:0,105,255:40,0 chr1 216172380 . A G, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,14,0:0,21,0:102:190,105,0,1357,105,1357:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,15,20 chr1 216172381 . T . PASS END=216172395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1182:0,88,255:31,0 chr1 216172396 . T . PASS END=216172400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr1 216173740 . C . PASS END=216173740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr1 216173744 . C . PASS END=216173885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1215:0,91,255:40,0 chr1 216173886 . G . PASS END=216173894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,86,255:25,0 chr1 216173895 . A . PASS END=216173898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,75,255:19,0 chr1 216173899 . C . PASS END=216173901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 216173902 . A . PASS END=216173906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr1 216219772 . C . PASS END=216219777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,963:0,75,255:26,0 chr1 216219778 . A . PASS END=216219780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,935:0,81,255:28,0 chr1 216219781 . A G, 137.29 PASS DP=30;MQ=248.91;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,17,0:0,13,0:87:175,90,0,1154,90,1154:255,90,0:0,0:1.3729e+02,8.7290e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,9:0,0,16,14 chr1 216219782 . T . PASS END=216219818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:30:0,90,1117:0,90,255:40,0 chr1 216219819 . A . PASS END=216219921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,102,255:40,0 chr1 216219922 . A . PASS END=216219934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,73,255:26,0 chr1 216221876 . C . PASS END=216221991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:41:0,120,1800:0,123,255:40,0 chr1 216243443 . C . PASS END=216243447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 216243448 . A . PASS END=216243448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 216243449 . G . PASS END=216243456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 216243457 . G . PASS END=216243459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 216243460 . T . PASS END=216243460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,864:0,64,255:26,0 chr1 216243461 . T . PASS END=216243611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,1002:0,81,255:40,0 chr1 216243612 . G . PASS END=216243612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr1 216243613 . G . PASS END=216243622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1233:0,89,255:34,0 chr1 216243623 . C . PASS END=216243630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,79,255:25,0 chr1 216243631 . G . PASS END=216243631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr1 216243632 . G . PASS END=216243635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:21,0 chr1 216243646 . T . PASS END=216243646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 216246229 . A . PASS END=216246311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:97:42:0,97,1504:0,97,255:40,0 chr1 216246313 . T . PASS END=216246313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1619:0,116,255:40,0 chr1 216246434 . A . PASS END=216246434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 216246437 . A . PASS END=216246437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 216246438 . C . PASS END=216246445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:25,0 chr1 216246446 . A . PASS END=216246630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:32:0,80,1169:0,80,255:40,0 chr1 216246631 . A . PASS END=216246642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:31,0 chr1 216247476 . T . PASS END=216247476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 216251423 . G . PASS END=216251423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 216251430 . C . PASS END=216251443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:25,0 chr1 216251444 . C . PASS END=216251444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 216251445 . A . PASS END=216251456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,901:0,65,255:26,0 chr1 216251457 . G . PASS END=216251464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 216251465 . C . PASS END=216251465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr1 216251466 . A . PASS END=216251704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:31:0,88,1321:0,88,255:40,0 chr1 216256798 . A . PASS END=216256928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,120,1800:0,143,255:40,0 chr1 216258036 . T . PASS END=216258036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 216258039 . C . PASS END=216258040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 216258041 . T . PASS END=216258041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 216258042 . G . PASS END=216258057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1196:0,89,255:36,0 chr1 216258058 . C . PASS END=216258058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1180:0,53,255:34,0 chr1 216258059 . T . PASS END=216258156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:36:0,85,1310:0,85,255:40,0 chr1 216258157 . G . PASS END=216258192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:49:0,99,1485:0,137,255:40,0 chr1 216258193 . A . PASS END=216258193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1320:0,68,255:32,0 chr1 216258194 . G T, 44.94 PASS DP=40;MQ=250.00;MQRankSum=5.182;ReadPosRankSum=1.804;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,15,0:0.385,0.000:39:16,6,0:8,9,0:44:80,0,50,478,849,1327:255,0,255:19,0:4.4938e+01,1.6101e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,8,7:10,14,7,8 chr1 216258195 . C . PASS END=216258196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:32,0 chr1 216258197 . C . PASS END=216258218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1053:0,82,255:32,0 chr1 216258219 . T . PASS END=216258219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 216258221 . T . PASS END=216258221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 216260061 . C . PASS END=216260163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,117,1755:0,128,255:40,0 chr1 216262355 . C . PASS END=216262481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:53:0,117,1755:0,159,255:40,0 chr1 216270425 . C . PASS END=216270555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,135,255:40,0 chr1 216270557 . T . PASS END=216270557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 216347385 . G . PASS END=216347385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 216347461 . C . PASS END=216347461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 216347503 . A . PASS END=216347503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 216347613 . A . PASS END=216347613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 216347620 . A . PASS END=216347620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 216347641 . A . PASS END=216347641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 216347743 . T . PASS END=216347744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:32,0 chr1 216347781 . G . PASS END=216347781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1388:0,101,255:35,0 chr1 216347793 . G . PASS END=216347793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 216347908 . A . PASS END=216347908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 216347953 . C . PASS END=216347953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1458:0,107,255:37,0 chr1 216347984 . C . PASS END=216347984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 216347998 . T . PASS END=216347998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr1 216348005 . G . PASS END=216348005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 216348032 . G . PASS END=216348033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 216348082 . C . PASS END=216348082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 216348084 . C . PASS END=216348084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:26,0 chr1 216348152 . G . PASS END=216348152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 216348183 . T . PASS END=216348183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 216348251 . T . PASS END=216348251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,107,255:34,0 chr1 216348264 . T . PASS END=216348264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 216348313 . A . PASS END=216348313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr1 216348433 . A . PASS END=216348433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 216348546 . T . PASS END=216348546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,187,255:40,0 chr1 216348558 . G . PASS END=216348558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr1 216348566 . T . PASS END=216348566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 216348580 . T . PASS END=216348726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,151,255:40,0 chr1 216348727 . A . PASS END=216348763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:45:0,85,1485:0,85,255:40,0 chr1 216348764 . C T, 49.85 PASS DP=52;MQ=250.00;MQRankSum=6.172;ReadPosRankSum=1.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,25,0:0.481,0.000:52:14,13,0:13,12,0:48:85,0,50,845,950,1794:255,0,255:25,0:4.9846e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,16,8,17:14,13,12,13 chr1 216348765 . T . PASS END=216348801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,118,1800:0,118,255:40,1 chr1 216348802 . A . PASS END=216348825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:33:0,96,1440:0,99,255:40,0 chr1 216363563 . A . PASS END=216363563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 216363565 . C . PASS END=216363709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:87:34:0,87,1305:0,101,255:40,0 chr1 216363721 . A . LowGQ END=216363721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,862:15,0,255:24,2 chr1 216369894 . C . PASS END=216370051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:35:0,90,1349:0,95,255:40,0 chr1 216370052 . A . PASS END=216370064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:28:0,60,900:0,83,255:24,0 chr1 216370065 . C . PASS END=216370065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:21,0 chr1 216370066 . T . PASS END=216370066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 216371655 . A . PASS END=216371655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 216371657 . C . PASS END=216371658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 216371659 . G . PASS END=216371673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:16,0 chr1 216371674 . T . PASS END=216371674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 216371675 . C . PASS END=216371703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,560:0,41,255:19,0 chr1 216371704 . G . PASS END=216371715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 216371716 . G . PASS END=216371736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,970:0,81,255:34,0 chr1 216371737 . T . PASS END=216371737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1112:0,66,255:33,0 chr1 216371738 . T . PASS END=216371896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:35:0,89,1257:0,89,255:40,0 chr1 216371897 . T . PASS END=216371915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1305:0,81,255:40,0 chr1 216371916 . T . PASS END=216371916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1123:0,44,255:28,0 chr1 216371917 . A . PASS END=216371926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1103:0,82,255:31,0 chr1 216371928 . T . PASS END=216371928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 216372969 . C . PASS END=216372978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,809:0,72,255:26,0 chr1 216372979 . C . PASS END=216373426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,994:0,81,255:40,0 chr1 216373427 . T . PASS END=216373447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:45:0,85,1440:0,85,255:40,0 chr1 216373448 . A . PASS END=216373448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:49:45:0,49,1496:0,49,255:31,0 chr1 216373449 . A . PASS END=216373450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:44:0,93,1395:0,99,255:30,0 chr1 216373451 . A . PASS END=216373451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1445:0,60,255:28,0 chr1 216373452 . A . PASS END=216373455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:38:0,81,1215:0,97,255:28,0 chr1 216373456 . T . PASS END=216373456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:27,0 chr1 216373457 . T . PASS END=216373457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1260:0,98,255:28,0 chr1 216373458 . G . PASS END=216373458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1316:0,59,255:27,0 chr1 216373459 . A . PASS END=216373459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1388:0,84,255:28,0 chr1 216373460 . A . PASS END=216373461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1266:0,72,255:28,0 chr1 216373462 . A . PASS END=216373464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr1 216373465 . T . PASS END=216373465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:32:0,72,1080:0,79,255:23,0 chr1 216373471 . G . PASS END=216373471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:22,0 chr1 216373476 . G . LowGQ END=216373476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:0:31:0,0,839:18,0,255:21,6 chr1 216380609 . A . PASS END=216380610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,929:0,90,255:31,0 chr1 216380615 . T . PASS END=216380773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:34:0,102,1266:0,102,255:40,0 chr1 216380775 . T . PASS END=216380775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,111,1665:0,135,255:37,0 chr1 216380779 . T . PASS END=216380779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,108,1620:0,135,255:36,0 chr1 216390717 . G . PASS END=216390717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 216390724 . C . PASS END=216390724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 216390729 . T . PASS END=216390731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 216390732 . T . PASS END=216390745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 216390746 . A . PASS END=216390746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr1 216390747 . G . PASS END=216390892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:90:34:0,90,1350:0,102,255:40,0 chr1 216390894 . T . PASS END=216390894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:31,0 chr1 216405292 . T . PASS END=216405292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr1 216405295 . C . PASS END=216405430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1215:0,83,255:40,0 chr1 216405431 . A . PASS END=216405446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:23:0,60,900:0,69,255:24,0 chr1 216405447 . G . PASS END=216405451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 216405452 . T . PASS END=216405456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr1 216405457 . T . PASS END=216405470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:18,0 chr1 216405471 . A . PASS END=216405471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 216405472 . T . PASS END=216405476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 216405477 . A . PASS END=216405477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 216405478 . C . PASS END=216405478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 216419925 . A . PASS END=216420570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:29:0,81,1072:0,83,255:40,0 chr1 216424234 . G . PASS END=216424234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 216424240 . C . PASS END=216424241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 216424245 . C . PASS END=216424430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:35:0,81,1215:0,92,255:40,0 chr1 216424431 . G . PASS END=216424441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:30:0,75,1125:0,86,255:26,0 chr1 216424444 . G . PASS END=216424444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 216462621 . C . PASS END=216462624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1186:0,83,255:31,0 chr1 216462625 . A . PASS END=216462661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:35:0,97,1313:0,97,255:40,0 chr1 216462662 . T A, 49.96 PASS DP=55;MQ=250.00;MQRankSum=6.356;ReadPosRankSum=3.662;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,27,0:0.491,0.000:55:15,17,0:13,10,0:48:85,0,50,937,993,1930:255,0,255:30,0:4.9962e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,9,18:17,11,11,16 chr1 216462663 . C . PASS END=216462699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,157,255:40,0 chr1 216462700 . A . PASS END=216462752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:47:0,120,1800:0,128,255:40,0 chr1 216462754 . T . PASS END=216462754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1535:0,110,255:39,0 chr1 216465513 . T . PASS END=216465513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 216465517 . C . PASS END=216465682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,988:0,84,255:40,0 chr1 216465683 . G . PASS END=216465683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:32,0 chr1 216465684 . T . PASS END=216465697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:32,0 chr1 216465698 . C . PASS END=216465707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,84,255:26,0 chr1 216465708 . T . PASS END=216465708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:28:0,57,855:0,68,255:19,0 chr1 216465709 . C . PASS END=216465712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 216495220 . C . PASS END=216495220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 216495223 . A . PASS END=216495224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr1 216495225 . A . PASS END=216495225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 216495226 . T . PASS END=216495228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 216495229 . A . PASS END=216495232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 216495233 . C . PASS END=216495233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:28,0 chr1 216495234 . T . PASS END=216495318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:30:0,87,1105:0,90,255:40,0 chr1 216496814 . A . PASS END=216496814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 216496816 . C . PASS END=216496816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 216496817 . T . PASS END=216496817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 216496818 . C . PASS END=216496820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:30,0 chr1 216496821 . A . PASS END=216496821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:30,0 chr1 216496822 . C . PASS END=216496822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 216496823 . T . PASS END=216496823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 216496824 . A . PASS END=216496825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,981:0,90,255:30,0 chr1 216496826 . T . PASS END=216496826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1038:0,77,255:30,0 chr1 216496827 . G . PASS END=216496848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1156:0,93,255:40,0 chr1 216496849 . T . PASS END=216496849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1398:0,68,255:40,0 chr1 216496850 . A . PASS END=216496909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:44:0,82,1488:0,82,255:40,0 chr1 216496910 . T . PASS END=216496946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:46:0,82,1412:0,82,255:40,0 chr1 216496947 . G A, 178.95 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,26,0:0,18,0:129:217,132,0,317,317,317:255,132,0:0,0:1.7895e+02,1.2895e+02,0.0000e+00,3.1372e+02,3.4849e+02,3.1673e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,25:0,0,25,19 chr1 216496948 . G . PASS END=216496984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,114,1537:0,115,255:40,0 chr1 216496985 . G . PASS END=216497027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,108,255:37,0 chr1 216497028 . T . PASS END=216497037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:23,0 chr1 216497510 . T . PASS END=216497694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:46:0,110,1800:0,110,255:40,0 chr1 216498646 . C . PASS END=216498914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:40:0,81,1354:0,81,255:40,0 chr1 216498915 . T . PASS END=216498915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1259:0,65,255:31,0 chr1 216498916 . C . PASS END=216498937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1194:0,83,255:32,0 chr1 216498938 . C . PASS END=216498941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,881:0,67,255:24,0 chr1 216498945 . T . PASS END=216498945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 216500933 . C . PASS END=216500996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,208,255:40,0 chr1 216500999 . G . PASS END=216500999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:71:0,120,1800:0,180,255:40,0 chr1 216536919 . A . PASS END=216536919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 216538293 . A . PASS END=216538293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 216538295 . C . PASS END=216538295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 216538296 . A . PASS END=216538427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:32:0,93,1395:0,96,255:40,0 chr1 216538429 . T . PASS END=216538429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr1 216538436 . A . PASS END=216538436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 216591841 . T . PASS END=216591841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr1 216591855 . C . PASS END=216592022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:59:0,120,1800:0,170,255:40,0 chr1 216592034 . C . PASS END=216592036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,117,1755:0,153,255:40,0 chr1 216595182 . A . PASS END=216595182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1467:0,117,255:39,0 chr1 216595191 . T . PASS END=216595191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 216595194 . A . PASS END=216595671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:33:0,81,1215:0,81,255:40,0 chr1 216595672 . A . PASS END=216595672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr1 216595673 . A . PASS END=216595679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 216595837 . C . PASS END=216595837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:31,0 chr1 216595859 . G . PASS END=216595859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 216595897 . C . PASS END=216595897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 216596580 . G . PASS END=216596580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 216596640 . G . PASS END=216596640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 216596656 . G . PASS END=216596656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 216596706 . G . PASS END=216596706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 216680281 . T . PASS END=216680525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1215:0,88,255:40,0 chr1 216692494 . C . PASS END=216692631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:38:0,84,1372:0,84,255:40,0 chr1 216692632 . T . PASS END=216692668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,169,255:40,0 chr1 216692669 . C T, 229.67 PASS DP=62;MQ=249.98;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,29,0:0,32,0:180:267,183,0,2290,183,2290:255,183,0:0,0:2.2967e+02,1.7967e+02,0.0000e+00,4.5000e+02,2.1444e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,38:0,0,33,28 chr1 216692670 . G . PASS END=216692706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:54:0,120,1800:0,145,255:40,0 chr1 216692707 . C . PASS END=216692749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:93:40:0,93,1395:0,109,255:40,0 chr1 216692750 . C . PASS END=216692761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:26:0,63,945:0,78,255:23,0 chr1 216692762 . G . PASS END=216692762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:19,0 chr1 216692763 . C . PASS END=216692763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 216737561 . C . PASS END=216737562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 216737563 . G . PASS END=216737566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 216737567 . T . PASS END=216737567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 216737568 . A . PASS END=216737569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,692:0,57,255:19,0 chr1 216737570 . G . PASS END=216737587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,878:0,63,255:24,0 chr1 216737588 . T . PASS END=216737588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 216737589 . A . PASS END=216737598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,785:0,72,255:24,0 chr1 216737599 . T . PASS END=216737599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,703:0,55,255:23,0 chr1 216737600 . C . PASS END=216737610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,902:0,72,255:25,0 chr1 216737611 . A . PASS END=216737741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1164:0,81,255:40,0 chr1 216737742 . C . PASS END=216737743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,93,255:24,0 chr1 216741330 . A . PASS END=216741440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,108,1620:0,112,255:40,0 chr1 216824315 . C . PASS END=216824431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:34:0,84,1260:0,102,255:40,0 chr1 216850418 . C . PASS END=216850433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:26,0 chr1 216850434 . G . PASS END=216850821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1033:0,81,255:40,0 chr1 216850822 . C . PASS END=216850833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:26:0,66,990:0,68,255:25,0 chr1 216855238 . A . PASS END=216855239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,193,255:40,0 chr1 216874767 . T . PASS END=216874851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:53:0,120,1800:0,159,255:40,0 chr1 216880701 . C . PASS END=216880771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:63:0,120,1800:0,132,255:40,0 chr1 216896586 . T . PASS END=216896586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,7:64:61:64:0,61,1801:0,61,255:40,0 chr1 216896587 . C . PASS END=216896615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:83:65:0,83,1800:0,83,255:40,0 chr1 216896616 . G . PASS END=216896641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,166,255:40,0 chr1 217078590 . C . PASS END=217078681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:83:53:0,83,1800:0,83,255:40,3 chr1 217604487 . T . PASS END=217604640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1376:0,93,255:40,0 chr1 217604641 . A . PASS END=217604658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:25:0,69,1035:0,75,255:26,0 chr1 217604659 . T . PASS END=217604659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 217604660 . T . PASS END=217604667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 217604668 . T . PASS END=217604668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:21,0 chr1 217604669 . T . PASS END=217604669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:21,0 chr1 217604670 . A . PASS END=217604704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,892:0,69,255:24,0 chr1 217604705 . A . PASS END=217604707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 217620450 . C . PASS END=217620518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,174,255:40,0 chr1 217622591 . C . PASS END=217622679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:49:0,120,1800:0,132,255:40,0 chr1 217665022 . C . PASS END=217665092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:74:0,120,1800:0,189,255:40,0 chr1 217668367 . T . PASS END=217668367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr1 217668368 . C . PASS END=217668417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:70:0,120,1800:0,164,255:40,0 chr1 217671698 . C . PASS END=217671733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,122,255:40,0 chr1 217671734 . A . PASS END=217671737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,124,255:40,0 chr1 217688164 . T . PASS END=217688231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,102,1530:0,105,255:40,0 chr1 217718989 . C . PASS END=217719087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,105,1575:0,108,255:40,0 chr1 217783502 . T . PASS END=217783534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:94:0,120,1800:0,255,255:40,0 chr1 217783663 . C . PASS END=217783742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:59:0,120,1800:0,162,255:40,0 chr1 217784231 . C . PASS END=217784413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:49:0,120,1800:0,126,255:40,0 chr1 217787483 . C . PASS END=217787544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:49:0,120,1800:0,130,255:40,0 chr1 217793125 . C . PASS END=217793619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:34:0,99,1301:0,102,255:40,0 chr1 217793620 . T . PASS END=217793620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 217793621 . C . PASS END=217793802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:32:0,90,1350:0,94,255:40,0 chr1 217793803 . A . PASS END=217793823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:26,0 chr1 217793824 . A . PASS END=217793831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:23:0,42,630:0,69,255:19,0 chr1 217793832 . A . PASS END=217793835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:22:0,39,585:0,66,255:13,0 chr1 217793836 . A . PASS END=217793841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,675:0,48,255:15,0 chr1 217804258 . C . PASS END=217804259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr1 217804260 . G . PASS END=217804260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 217804261 . C . PASS END=217804264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 217804265 . T . PASS END=217804265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 217804266 . C . PASS END=217804287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 217804288 . G . PASS END=217804294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 217804295 . G . PASS END=217804313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 217804721 . A . PASS END=217804788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:42:0,110,1490:0,110,255:40,0 chr1 217822224 . T . PASS END=217822313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:73:0,120,1800:0,210,255:40,0 chr1 217824439 . G . PASS END=217824520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,1:123:99:104:0,120,1800:0,255,255:40,0 chr1 217838621 . T . PASS END=217838623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,176,255:40,0 chr1 217842375 . G . PASS END=217842425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,141,255:40,0 chr1 217856600 . A . PASS END=217856703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:51:0,120,1800:0,143,255:40,0 chr1 217915317 . G . PASS END=217915365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:87:58:0,87,1800:0,87,255:40,0 chr1 217915366 . G . PASS END=217915366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,9:78:62:78:0,62,2173:0,62,255:40,0 chr1 217915367 . C . PASS END=217915440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:92:53:0,92,1800:0,92,255:40,0 chr1 217945161 . C . PASS END=217945165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:12:30:0,12,180:0,90,255:5,0 chr1 217945166 . G . LowGQ END=217945189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:48,0:48:0:46:0,0,0:0,137,255:3,0 chr1 217945190 . A AAGG, 200.52 PASS DP=51;MQ=249.56;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,25,0:0,26,0:151:233,154,0,2293,154,2293:255,153,0:0,82:2.0052e+02,1.5052e+02,0.0000e+00,4.5000e+02,1.8529e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,30,21:0,0,24,27 chr1 217945191 . A . LowGQ END=217945191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,50:51:0:51:0,0,0:255,115,0:40,0 chr1 217945192 . G . PASS END=217945233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,117,1755:0,121,255:40,0 chr1 217945234 . G . PASS END=217945245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,111,1665:0,122,255:39,0 chr1 217947676 . A . PASS END=217947676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:26,0 chr1 217947677 . T . PASS END=217947875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:31:0,80,1209:0,80,255:40,0 chr1 217947876 . T . PASS END=217947879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:35:0,66,990:0,92,255:26,0 chr1 217955516 . G . PASS END=217955519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 217955520 . C . PASS END=217955520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1066:0,65,255:29,0 chr1 217955521 . C . PASS END=217955618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:33:0,87,1213:0,87,255:40,0 chr1 217955619 . A . PASS END=217955619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1385:0,71,255:39,0 chr1 217955620 . G . PASS END=217955648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1241:0,85,255:40,0 chr1 217955649 . A . PASS END=217955664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,65,255:26,0 chr1 217975060 . G . PASS END=217975192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,105,1575:0,106,255:40,0 chr1 218036116 . G . PASS END=218036196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:52:0,120,1800:0,140,255:40,0 chr1 218458659 . A . PASS END=218458668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 218458669 . C . PASS END=218458676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 218458677 . G . PASS END=218458677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,660:0,24,255:20,0 chr1 218458678 . A . PASS END=218458680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 218458681 . C . PASS END=218458681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 218458682 . A . PASS END=218458702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,860:0,61,255:26,0 chr1 218458703 . C . PASS END=218458706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 218458707 . A . PASS END=218458712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 218458713 . A . PASS END=218458713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,842:0,50,255:24,0 chr1 218458714 . C . PASS END=218458720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 218458721 . G . PASS END=218458728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 218458729 . T . PASS END=218458729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 218458730 . G . PASS END=218458733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 218458734 . A . PASS END=218458734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,868:0,40,255:27,0 chr1 218458735 . T . PASS END=218458742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1078:0,90,255:30,0 chr1 218458743 . G . PASS END=218458760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,824:0,61,255:26,0 chr1 218458761 . C . PASS END=218458761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,815:0,48,255:23,0 chr1 218458762 . T . PASS END=218458767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,872:0,64,255:23,0 chr1 218458768 . A . PASS END=218458772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:24:0,42,739:0,42,255:22,0 chr1 218458773 . G . PASS END=218458773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 218458774 . C . PASS END=218458774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr1 218458775 . C . PASS END=218458775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 218458776 . A . PASS END=218458776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:21,0 chr1 218458777 . C . PASS END=218458778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 218458779 . G . PASS END=218458780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,739:0,42,255:22,0 chr1 218458781 . C . PASS END=218458783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 218458784 . T . PASS END=218458784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:21,0 chr1 218458785 . T . PASS END=218458794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,781:0,72,255:24,0 chr1 218458795 . A . PASS END=218458795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,764:0,55,255:20,0 chr1 218458796 . A . PASS END=218458796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 218458797 . G . PASS END=218458797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:18,0 chr1 218475636 . G . PASS END=218475901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:83:32:0,83,1158:0,83,255:40,1 chr1 218478370 . C . PASS END=218478467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:75:0,120,1800:0,208,255:40,0 chr1 218480773 . G . PASS END=218480974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:33:0,81,1141:0,82,255:40,0 chr1 218496078 . G . PASS END=218496103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:57:0,120,1800:0,171,255:40,0 chr1 218496104 . G . PASS END=218496304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:34:0,87,1305:0,92,255:40,0 chr1 218496305 . C . PASS END=218496305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr1 218496306 . T . PASS END=218496312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:30,0 chr1 218496313 . A . PASS END=218496314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1094:0,74,255:29,0 chr1 218496315 . T . PASS END=218496326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:33,0 chr1 218496327 . C . PASS END=218496327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 218496328 . G . PASS END=218496336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:33,0 chr1 218496337 . C . PASS END=218496337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 218496338 . G . PASS END=218496357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1202:0,83,255:33,0 chr1 218496358 . T . PASS END=218496360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1108:0,74,255:26,0 chr1 218496361 . A . PASS END=218496367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 218496368 . G . PASS END=218496368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 218496369 . C . PASS END=218496373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 218496374 . T . PASS END=218496403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 218496404 . G . PASS END=218496428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,668:0,43,255:19,0 chr1 218496429 . A . PASS END=218496448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:13,0 chr1 218496449 . G . PASS END=218496454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 218496455 . C . PASS END=218496464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:13:8:0,13,225:0,13,255:6,0 chr1 218504290 . A . PASS END=218504292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 218504293 . G . PASS END=218504426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1032:0,84,255:40,0 chr1 218504427 . T . PASS END=218504433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:34:0,69,1035:0,102,255:25,0 chr1 218518762 . T . PASS END=218518762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 218518773 . A . PASS END=218518773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 218518795 . G . PASS END=218518795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr1 218518807 . G . PASS END=218518807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1280:0,102,255:34,0 chr1 218518891 . G . PASS END=218518891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 218519250 . T . PASS END=218519250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 218519286 . G . PASS END=218519286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 218519345 . A . PASS END=218519345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 218519361 . C . PASS END=218519362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr1 218519365 . G . PASS END=218519365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,44,255:13,0 chr1 218519424 . G . LowGQ END=218519424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,262:133,0,255:14,1 chr1 218519428 . G . PASS END=218519428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,496:0,9,255:14,0 chr1 218519475 . T . PASS END=218519475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 218519502 . C . PASS END=218519502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 218519504 . A . PASS END=218519504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 218519530 . T . PASS END=218519530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 218519706 . T . PASS END=218519706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 218519943 . A . PASS END=218519943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 218519948 . C . PASS END=218519948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr1 218520044 . A . PASS END=218520157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1189:0,80,255:40,0 chr1 218520158 . G . PASS END=218520158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1019:0,41,255:29,0 chr1 218520159 . C . PASS END=218520205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1163:0,80,255:34,0 chr1 218520206 . G . PASS END=218520206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,2 chr1 218520207 . A . PASS END=218520207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:35:35:0,35,1049:0,35,255:30,2 chr1 218520208 . A . PASS END=218520208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:34,0 chr1 218520209 . G . PASS END=218520243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1395:0,99,255:34,0 chr1 218520244 . G . PASS END=218520244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr1 218520245 . A . PASS END=218520319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1270:0,92,255:38,0 chr1 218520320 . A . PASS END=218520320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1281:0,78,255:34,0 chr1 218520321 . G . PASS END=218520352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:28:0,81,926:0,84,255:35,0 chr1 218520353 . T . PASS END=218520389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,886:0,66,255:25,0 chr1 218520390 . G . PASS END=218520390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 218520394 . G . PASS END=218520394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 218536676 . C . PASS END=218536747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,92,255:40,0 chr1 218536748 . G . PASS END=218536759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:29:0,69,1035:0,87,255:25,0 chr1 218578501 . T . PASS END=218578501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 218578511 . A . PASS END=218578642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:37:0,102,1530:0,111,255:40,0 chr1 218578643 . G . PASS END=218578674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:47:0,84,1260:0,125,255:40,0 chr1 218578683 . C . PASS END=218578683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:69:41:0,69,1035:0,106,255:23,0 chr1 218578685 . T TTTGTTGTTG, 50.00 PASS DP=42;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=0.054;FractionInformativeReads=0.786;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,17,0:0.515,0.000:33:11,10,0:5,7,0:48:57,0,50,459,375,833:166,0,255:14,11:5.0000e+01,6.5492e-05,5.2951e+01,4.5000e+02,4.0942e+02,4.5000e+02:0.00,7.00,10.00,34.77,41.77,37.77:1,15,2,15:4,12,9,8 chr1 218607418 . C . PASS END=218607418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 218607424 . A . PASS END=218607525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,117,1621:0,119,255:40,0 chr1 218607526 . G . PASS END=218607556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,108,1620:0,121,255:40,0 chr1 218607675 . T . PASS END=218607676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,186,255:40,0 chr1 218607678 . A . PASS END=218607678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr1 218607680 . A . PASS END=218607790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,3:83:99:62:0,116,1800:0,116,255:40,0 chr1 218609307 . T . PASS END=218609307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 218609312 . G . PASS END=218609324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:26,0 chr1 218609325 . C . PASS END=218609330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:33,0 chr1 218609331 . A . PASS END=218609331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr1 218609332 . T . PASS END=218609490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:86:33:0,86,1189:0,86,255:40,0 chr1 218610685 . A . PASS END=218610688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:97:61:0,97,1800:0,97,255:40,1 chr1 218610689 . G . PASS END=218610689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:66:66:0,66,2049:0,66,255:40,1 chr1 218610690 . T . PASS END=218610692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:95:66:0,95,1800:0,95,255:40,0 chr1 218610693 . A . PASS END=218610693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,8:66:20:66:0,20,1736:0,20,255:40,0 chr1 218610694 . G . PASS END=218610713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,5:76:99:73:0,109,1800:0,109,255:40,0 chr1 218610714 . C . PASS END=218610733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:81:0,120,1800:0,122,255:40,0 chr1 218610734 . A . PASS END=218610734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,8:86:67:86:0,67,2564:0,67,255:40,0 chr1 218610735 . G . PASS END=218610840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:48:0,111,1665:0,112,255:40,0 chr1 218614533 . T . PASS END=218614533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 218614546 . G . PASS END=218614551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1297:0,92,255:36,0 chr1 218614552 . A . PASS END=218614552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:35,0 chr1 218614553 . G . PASS END=218614704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,102,1700:0,102,255:40,0 chr1 218614749 . A . PASS END=218614749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 218614897 . A . PASS END=218614897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1511:0,99,255:40,0 chr1 218615025 . G GACAACA, 50.00 PASS DP=37;MQ=248.16;MQRankSum=4.881;ReadPosRankSum=0.962;FractionInformativeReads=0.919;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,20,0:0.588,0.000:34:5,12,0:9,8,0:47:65,0,48,532,265,797:255,0,255:14,20:5.0000e+01,8.1024e-05,5.0615e+01,4.5000e+02,2.9930e+02,4.5000e+02:0.00,15.00,18.00,34.77,49.77,37.77:6,8,5,15:9,5,11,9 chr1 218615042 . C . PASS END=218615042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 218615193 . A . PASS END=218615193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 218615293 . C . PASS END=218615293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 218615476 . C . PASS END=218615476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:87:0,120,1800:0,245,255:40,0 chr1 218615485 . T . PASS END=218615485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,3:91:99:91:0,120,1800:0,224,255:40,0 chr1 218615666 . A . PASS END=218615666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:111:0,120,1800:0,255,255:40,0 chr1 218615676 . A . PASS END=218615676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,0:127:99:127:0,120,1800:0,255,255:40,0 chr1 218615738 . A . PASS END=218615738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:119:0,120,1800:0,255,255:40,0 chr1 218615927 . A . LowGQ END=218615927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,6:67:0:67:0,0,2062:31,0,255:40,8 chr1 218615933 . T . PASS END=218615933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 218615975 . A . PASS END=218615975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr1 218616042 . T . PASS END=218616042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,173,255:40,0 chr1 218616132 . T . PASS END=218616132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr1 218616135 . A . PASS END=218616135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 218616319 . T . PASS END=218616319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr1 218616575 . C . PASS END=218616575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 218616711 . C . PASS END=218616711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 218616757 . G . PASS END=218616757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 218616793 . A . PASS END=218616793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1335:0,105,255:35,0 chr1 218617051 . G . LowGQ END=218617051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,12:43:0:43:0,0,579:255,0,255:31,17 chr1 218617056 . T . PASS END=218617056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 218617125 . G . PASS END=218617125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 218617200 . A . PASS END=218617200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1296:0,102,255:34,0 chr1 218617213 . G . PASS END=218617213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1335:0,108,255:36,0 chr1 218617321 . T . PASS END=218617321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 218617684 . G . PASS END=218617684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 218617780 . G . PASS END=218617780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 218617845 . A . PASS END=218617845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 218617897 . A . PASS END=218617897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:33,0 chr1 218617914 . C . PASS END=218617914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 219347233 . A . PASS END=219347266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:19,0 chr1 219347267 . G . PASS END=219347275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 219347276 . C . PASS END=219347280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 219347281 . G . PASS END=219347284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 219347285 . G . PASS END=219347286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 219347287 . A . PASS END=219347312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:23,0 chr1 219347313 . G . PASS END=219347313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 219347314 . C . PASS END=219347320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr1 219347321 . C . PASS END=219347321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 219347322 . A . PASS END=219347323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 219352489 . G . PASS END=219352588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:83:0,120,1800:0,234,255:40,0 chr1 219352742 . T . PASS END=219352768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,1:121:99:118:0,120,1800:0,255,255:40,0 chr1 219366424 . A . PASS END=219366459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:59:0,110,1800:0,110,255:40,0 chr1 219366460 . A . PASS END=219366593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:53:0,120,1800:0,143,255:40,0 chr1 219383857 . T . PASS END=219383866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:98:38:0,98,1341:0,98,255:39,0 chr1 219383867 . T C, 163.92 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,23,0:0,16,0:114:202,117,0,1467,117,1467:255,117,0:0,0:1.6392e+02,1.1392e+02,0.0000e+00,4.5000e+02,1.4869e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,15:0,0,20,19 chr1 219383868 . T . PASS END=219383904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:39:0,87,1432:0,87,255:40,0 chr1 219383905 . A G, 262.22 PASS DP=72;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,39,0:0,33,0:212:300,215,0,400,400,400:255,216,0:0,0:2.6222e+02,2.1222e+02,0.0000e+00,3.9699e+02,4.3172e+02,4.0000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,47,25:0,0,36,36 chr1 219383906 . C . PASS END=219383942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,175,255:40,0 chr1 219383943 . T . PASS END=219383970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,158,255:40,0 chr1 219383971 . A . PASS END=219383989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,125,255:40,0 chr1 219384834 . G . PASS END=219384834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 219384835 . C . PASS END=219384835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr1 219384836 . T . PASS END=219385070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:32:0,87,1305:0,96,255:40,0 chr1 219782969 . T . PASS END=219782972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:12,0 chr1 219782973 . C . PASS END=219782985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:25:9:0,25,327:0,25,255:9,0 chr1 219782986 . C . PASS END=219783004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 219783005 . G . PASS END=219783005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 219783006 . T . PASS END=219783006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 219783007 . C . PASS END=219783025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:17,0 chr1 219783026 . A . PASS END=219783065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,784:0,66,255:25,0 chr1 219783066 . T . PASS END=219783069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 219783070 . A . PASS END=219783070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 219783071 . T . PASS END=219783109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1060:0,93,255:40,0 chr1 219783110 . C . PASS END=219783146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,174,255:40,0 chr1 219783147 . A G, 20.45 PASS DP=76;MQ=27.28;MQRankSum=1.379;ReadPosRankSum=4.749;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,23,0:0.303,0.000:76:25,10,0:28,13,0:20:55,0,39,794,1830,2624:255,0,255:40,0:2.0452e+01,3.9566e-02,4.2373e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,21,14,9:32,21,7,16 chr1 219783148 . T . PASS END=219783184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:76:0,120,1800:0,212,255:40,0 chr1 219783185 . G . PASS END=219783241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,2:121:99:111:0,120,1800:0,255,255:40,0 chr1 219783242 . T . PASS END=219783278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:96:0,120,1800:0,255,255:40,0 chr1 219783279 . T A, 321.22 PASS DP=96;MQ=26.82;FractionInformativeReads=0.990 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,95,0:1.000,0.000:95:0,45,0:0,50,0:282:359,285,0,3522,287,3536:255,255,0:0,0:3.2122e+02,2.8155e+02,0.0000e+00,4.4853e+02,3.1884e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,74:0,0,49,46 chr1 219783280 . C . PASS END=219783316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:58:0,120,1800:0,141,255:40,1 chr1 219783317 . T . PASS END=219783345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:38:0,81,1215:0,101,255:40,0 chr1 219783346 . T . PASS END=219783355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:33:0,60,900:0,60,255:25,0 chr1 219783356 . C . PASS END=219783357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:28:0,57,855:0,68,255:19,0 chr1 219783358 . C . PASS END=219783361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 219783362 . G . PASS END=219783371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:17,0 chr1 219783372 . G . PASS END=219783372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:12,0 chr1 219783373 . C . PASS END=219783374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:14,0 chr1 219783375 . G . PASS END=219783391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,34,255:13,0 chr1 219783392 . C . PASS END=219783411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,466:0,42,255:15,0 chr1 219783412 . T . PASS END=219783412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 219783413 . G . PASS END=219783415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 219783416 . G . PASS END=219783416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:13,0 chr1 219783417 . G . PASS END=219783417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 219783418 . A . PASS END=219783418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 219783419 . T . PASS END=219783428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 219783429 . T . PASS END=219783429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 219783430 . T . PASS END=219783440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 219783441 . T . PASS END=219783441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 219783442 . G . PASS END=219783446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:12,0 chr1 219783447 . A . PASS END=219783447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 219783448 . C . PASS END=219783459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,411:0,36,255:12,0 chr1 219783460 . G . PASS END=219783469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr1 219783470 . A . PASS END=219783470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 219783471 . C . PASS END=219783482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,528:0,48,255:16,0 chr1 219783483 . A . PASS END=219783484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 219783485 . G . PASS END=219783497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:16,0 chr1 219783498 . C . PASS END=219783498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 219783499 . A . PASS END=219783504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 219783505 . C . PASS END=219783505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 219783506 . A . PASS END=219783511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 219783512 . T . PASS END=219783512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 219783513 . A . PASS END=219783514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 219783515 . T . PASS END=219783515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 219783516 . G . PASS END=219783517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 219783518 . G . PASS END=219783522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,1 chr1 219783523 . C . PASS END=219783523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:13:16:0,13,516:0,13,255:13,1 chr1 219783524 . A . PASS END=219783524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:12,0 chr1 219783525 . A . PASS END=219783561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,352:0,33,255:13,0 chr1 219783562 . T . PASS END=219783562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 219783563 . T . PASS END=219783598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 219783599 . T . PASS END=219783605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 219783606 . G . PASS END=219783628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,480:0,39,255:13,0 chr1 219783629 . C . PASS END=219783629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 219783630 . A . PASS END=219783649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:13:0,31,437:0,31,255:13,0 chr1 219783650 . T . PASS END=219783650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 219783651 . A . PASS END=219783655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 219783656 . T . PASS END=219783661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 219783662 . A . PASS END=219783662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 219783663 . A . PASS END=219783667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 219783668 . T . PASS END=219783669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 219783670 . T . PASS END=219783671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 219783672 . A . PASS END=219783702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr1 219783703 . G . PASS END=219783703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 219783704 . C . PASS END=219783708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 219783709 . G A, 4.76 DRAGENSnpHardQUAL DP=17;MQ=14.00;MQRankSum=3.110;ReadPosRankSum=3.110;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,5,0:0.294,0.000:17:6,0,0:6,5,0:5:38,0,14,179,400,578:143,0,255:12,0:4.7609e+00,1.8519e+00,1.8852e+01,1.8049e+02,4.3649e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,3,5,0:7,5,0,5 chr1 219783710 . C . PASS END=219783726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,615:0,44,255:18,0 chr1 219783727 . C . PASS END=219783736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr1 219783737 . G . PASS END=219783737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 219783738 . A . PASS END=219783744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 219783745 . T . PASS END=219783746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 219783747 . T . PASS END=219783755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,720:0,47,255:19,0 chr1 219783756 . T . PASS END=219783758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,906:0,62,255:23,0 chr1 219783759 . A . PASS END=219783759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 219783760 . C . PASS END=219783777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:23:0,64,915:0,64,255:26,0 chr1 219783778 . A . PASS END=219783778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 219783779 . A . PASS END=219783779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 219783780 . G . PASS END=219783784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:30,0 chr1 219783785 . T . PASS END=219783785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:29,0 chr1 219783786 . G . PASS END=219783789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr1 219783790 . C . PASS END=219783790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 219783791 . T . PASS END=219783820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1150:0,86,255:37,0 chr1 219783821 . T . PASS END=219783821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1246:0,78,255:35,0 chr1 219783822 . T . PASS END=219783921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1124:0,80,255:40,0 chr1 219783922 . A . PASS END=219783939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,68,255:26,0 chr1 219783940 . A . PASS END=219783940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:22,0 chr1 219783941 . G . PASS END=219783942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 219783943 . T . PASS END=219783963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:18:0,44,675:0,44,255:18,0 chr1 219783964 . T . PASS END=219783964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,485:0,37,255:17,0 chr1 219783965 . C . PASS END=219784003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,521:0,45,255:18,0 chr1 219784004 . C . PASS END=219784004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 219784005 . T . PASS END=219784007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 219784008 . A . PASS END=219784013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 219784014 . T . PASS END=219784028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:10:0,24,360:0,25,255:9,0 chr1 219784029 . G . PASS END=219784029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 219784030 . G . PASS END=219784030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 219784031 . C . PASS END=219784031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 219784032 . T . PASS END=219784032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 219784033 . C . PASS END=219784039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 219784040 . T . PASS END=219784040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr1 219784041 . T . PASS END=219784051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,329:0,33,255:11,0 chr1 219784052 . G . PASS END=219784052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 219784053 . G . PASS END=219784089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 219784090 . C . PASS END=219784090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 219784091 . A . PASS END=219784091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 219784092 . C . PASS END=219784094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 219784095 . T . PASS END=219784097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:13:10:0,13,270:0,13,255:6,0 chr1 219784098 . G . PASS END=219784112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,233:0,21,233:7,0 chr1 219784113 . C . PASS END=219784116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 219784117 . T . PASS END=219784117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 219784118 . T . PASS END=219784122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr1 219784123 . C . LowGQ END=219784123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:5,0 chr1 219784124 . C . PASS END=219784127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,197:6,0 chr1 219784128 . T . PASS END=219784128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 219784129 . T . PASS END=219784136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 219784137 . T . PASS END=219784137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 219784138 . G . PASS END=219784161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,172:0,18,172:6,0 chr1 219784162 . G . PASS END=219784162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 219784163 . T . PASS END=219784166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 219784167 . T . PASS END=219784167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 219784168 . C . PASS END=219784168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 219784169 . T . PASS END=219784174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 219784175 . C . PASS END=219784175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 219784176 . A . PASS END=219784254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 219784255 . C . PASS END=219784301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 219784302 . C . PASS END=219784319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:13,0 chr1 219784320 . T . PASS END=219784320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr1 219784321 . C . PASS END=219784326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 219784327 . T . PASS END=219784327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 219784328 . C . PASS END=219784344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr1 219784345 . C . PASS END=219784354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 219784355 . A . PASS END=219784374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,463:0,42,255:18,0 chr1 219784375 . C . PASS END=219784375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 219784376 . A . PASS END=219784378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 219784379 . A . PASS END=219784391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr1 219784392 . G . PASS END=219784392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 219784393 . A . PASS END=219784394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 219784395 . A . PASS END=219784395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 219784396 . T . PASS END=219784397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 219784398 . C . PASS END=219784624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:29:0,81,1215:0,87,255:40,0 chr1 219784625 . C . PASS END=219784644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:24:0,63,945:0,72,255:23,0 chr1 219784645 . T . PASS END=219784645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 219784646 . T . PASS END=219784690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,762:0,63,255:25,0 chr1 219784691 . T . PASS END=219784691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 219784692 . C . PASS END=219784697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 219784698 . G . PASS END=219784747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,637:0,54,255:19,0 chr1 219784748 . T . PASS END=219784748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 219784749 . T . PASS END=219784778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,568:0,40,255:19,0 chr1 219784779 . C . PASS END=219784785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 219784786 . C . PASS END=219784842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,682:0,44,255:19,0 chr1 219784843 . C . PASS END=219784870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,738:0,63,255:26,0 chr1 219784871 . T . PASS END=219784879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 219784880 . A . PASS END=219784880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 219784881 . T . PASS END=219784903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1119:0,80,255:32,0 chr1 219784904 . A . PASS END=219784904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1078:0,44,255:31,0 chr1 219784905 . T . PASS END=219785049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:86:34:0,86,1210:0,86,255:40,0 chr1 219785050 . A . PASS END=219785086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,99,1485:0,129,255:40,0 chr1 219785087 . A G, 30.34 PASS DP=43;MQ=24.75;MQRankSum=3.085;ReadPosRankSum=3.337;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,22,0:0.524,0.000:42:12,7,0:8,15,0:29:65,0,30,787,707,1494:255,0,255:13,0:3.0339e+01,6.1248e-03,3.3147e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,16,9,13:8,12,10,12 chr1 219785088 . G . PASS END=219785102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,91,255:31,0 chr1 219785103 . A . PASS END=219785123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:26,0 chr1 219785124 . A . PASS END=219785124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 219785125 . A . PASS END=219785126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 219785127 . A . PASS END=219785133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:17,0 chr1 219785134 . C . PASS END=219785134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,63,255:12,0 chr1 219785135 . A . PASS END=219785135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,654:0,24,255:11,0 chr1 219785136 . A . PASS END=219785137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:20:0,36,540:0,60,255:12,0 chr1 219785138 . A . PASS END=219785141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:16:0,24,360:0,48,255:8,0 chr1 219785142 . C . LowGQ END=219785249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 219785250 . A . PASS END=219785260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 219785261 . C . PASS END=219785274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 219785275 . G . LowGQ END=219785275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:6,0 chr1 219785276 . C . PASS END=219785306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 219785307 . T . PASS END=219785307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 219785308 . T . PASS END=219785313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 219785314 . G . PASS END=219785315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 219785316 . G . PASS END=219785326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 219785327 . G . PASS END=219785327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 219785328 . T . PASS END=219785338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 219785339 . G . PASS END=219785339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 219785340 . C . PASS END=219785368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 219785369 . G GA, 0.02 DRAGENIndelHardQUAL DP=14;MQ=14.00;MQRankSum=2.100;ReadPosRankSum=-0.091;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:12,2,0:0.143,0.000:14:3,2,0:9,0,0:24:0,6,20,34,134,162:35,0,255:12,2:1.8768e-02,2.3739e+01,4.0739e+01,6.8650e+01,1.8699e+02,2.0013e+02:0.00,18.00,21.00,34.77,52.77,37.77:10,2,1,1:5,7,1,1 chr1 219785370 . A . LowGQ END=219785370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,349:36,0,255:14,0 chr1 219785371 . A . PASS END=219785379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 219785380 . A . PASS END=219785380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 219785381 . G . PASS END=219785389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 219785390 . T . PASS END=219785404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 220087703 . C . PASS END=220087703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr1 220087944 . C . PASS END=220087944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 220088161 . C . PASS END=220088161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 220088325 . T . PASS END=220088325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 220088339 . A . PASS END=220088339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1225:0,99,255:33,0 chr1 220088394 . G . PASS END=220088394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 220088435 . C . PASS END=220088435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,157,255:40,0 chr1 220088476 . C . PASS END=220088476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,105,1575:0,135,255:35,0 chr1 220088552 . T . PASS END=220088552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 220088619 . A . PASS END=220088619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr1 220088674 . C . PASS END=220088674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 220088721 . C . PASS END=220088721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 220088791 . T . PASS END=220089284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1164:0,83,255:40,0 chr1 220089285 . T . PASS END=220089290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,74,255:23,0 chr1 220091597 . T . PASS END=220091599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 220091600 . G . PASS END=220091610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr1 220091611 . T . PASS END=220091611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 220091612 . T . PASS END=220091628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr1 220091629 . A . PASS END=220091749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:30:0,89,1119:0,89,255:40,0 chr1 220091750 . T . PASS END=220091750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr1 220091751 . C . PASS END=220091777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:34,0 chr1 220091778 . G . PASS END=220091778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1143:0,68,255:29,0 chr1 220091779 . G . PASS END=220091789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr1 220091790 . C . PASS END=220091812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,64,255:25,0 chr1 220091813 . C . PASS END=220091828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,745:0,49,255:19,0 chr1 220091829 . A . PASS END=220091829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,580:0,13,255:16,0 chr1 220091830 . A . PASS END=220091836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,676:0,57,255:19,0 chr1 220091842 . A . PASS END=220091842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 220100370 . C . PASS END=220100447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:56:0,99,1800:0,99,255:40,0 chr1 220100454 . T . PASS END=220100472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:51:0,84,1260:0,86,255:40,0 chr1 220100473 . T . PASS END=220100476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:42:44:0,42,630:0,102,255:16,0 chr1 220100477 . G . PASS END=220100477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:37:45:0,37,1215:0,37,255:10,0 chr1 220100478 . T . PASS END=220100483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:42:41:0,42,630:0,62,255:14,0 chr1 220100688 . C . PASS END=220100694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 220100695 . C . PASS END=220100711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1094:0,90,255:35,0 chr1 220100712 . C . PASS END=220100712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:34,0 chr1 220100713 . C . PASS END=220100715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:35,0 chr1 220100716 . G . PASS END=220100717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:36:0,61,1156:0,61,255:34,0 chr1 220100718 . A . PASS END=220100718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1297:0,111,255:37,0 chr1 220100719 . G . PASS END=220100719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:35,0 chr1 220100720 . A . PASS END=220100720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 220100721 . C . PASS END=220100722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:56:37:0,56,1183:0,56,255:32,0 chr1 220100723 . A . PASS END=220100755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:38:0,81,1256:0,81,255:40,0 chr1 220100756 . A . PASS END=220100756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:73:45:0,73,1262:0,73,255:40,0 chr1 220100757 . A . PASS END=220100807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:38:0,83,1390:0,83,255:40,0 chr1 220100808 . T . PASS END=220100808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:37,0 chr1 220100809 . G . PASS END=220100832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1103:0,80,255:38,0 chr1 220100833 . A . PASS END=220100833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 220100834 . A . PASS END=220100835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1210:0,96,255:32,0 chr1 220100836 . A . PASS END=220100836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:30,0 chr1 220100837 . A . PASS END=220100838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 220100839 . A . PASS END=220100839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1052:0,65,255:30,0 chr1 220100840 . T . PASS END=220100840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 220100841 . C . PASS END=220100850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:72:32:0,72,1080:0,79,255:29,0 chr1 220101143 . C . PASS END=220101200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,291:0,30,255:13,0 chr1 220101201 . C . PASS END=220101201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 220101202 . C . PASS END=220101206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 220101207 . G . PASS END=220101216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 220101217 . G . PASS END=220101261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 220101262 . T . PASS END=220101263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 220101264 . C . PASS END=220101267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 220101268 . C . PASS END=220101315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:17,0 chr1 220101316 . T . PASS END=220101316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 220101317 . G . PASS END=220101324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:17,0 chr1 220101325 . T . PASS END=220101325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 220101326 . G . PASS END=220101341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 220101342 . T . PASS END=220101342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 220101343 . C . PASS END=220101355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 220101356 . A . PASS END=220101356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 220101357 . C . PASS END=220101366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,537:0,48,255:16,0 chr1 220101367 . G . PASS END=220101367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 220101368 . C . PASS END=220101389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,545:0,48,255:16,0 chr1 220101390 . C . PASS END=220101390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 220101391 . A . PASS END=220101394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 220101395 . C . PASS END=220101395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 220101396 . C . PASS END=220101467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,635:0,40,255:19,0 chr1 220101468 . G . PASS END=220101495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 220101496 . A . PASS END=220101496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 220101497 . T . PASS END=220101542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,817:0,62,255:25,0 chr1 220101543 . C . PASS END=220101544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:25:0,40,843:0,40,255:22,1 chr1 220101545 . C . PASS END=220101545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr1 220101546 . C . PASS END=220101562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 220101563 . A . PASS END=220101563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 220101564 . G . PASS END=220101571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 220101572 . T . PASS END=220101574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,767:0,50,255:19,0 chr1 220101575 . C . PASS END=220101579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 220101580 . A . PASS END=220101580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 220101581 . A . PASS END=220101588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 220101589 . G . PASS END=220101589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 220101590 . T . PASS END=220101603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:24,0 chr1 220101604 . A . PASS END=220101607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 220101608 . A . PASS END=220101616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 220101617 . T . PASS END=220101617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:24,0 chr1 220101618 . C . PASS END=220101619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 220101620 . G . PASS END=220101628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:30,0 chr1 220101629 . A . PASS END=220101629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 220101630 . C . PASS END=220101648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:32,0 chr1 220101649 . A . PASS END=220101649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:30,0 chr1 220101650 . G . PASS END=220101684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1050:0,80,255:31,0 chr1 220101685 . T . PASS END=220101685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:27,0 chr1 220101686 . T . PASS END=220101689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 220101690 . C . PASS END=220101690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,975:0,76,255:27,0 chr1 220101691 . A . PASS END=220101699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 220101700 . G . PASS END=220101700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 220101701 . A . PASS END=220101716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:30:0,82,1149:0,82,255:31,0 chr1 220101717 . G . PASS END=220101717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 220101718 . A . PASS END=220101719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 220101720 . G . PASS END=220101721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1063:0,74,255:27,0 chr1 220101722 . A . PASS END=220101725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 220101726 . G . PASS END=220101728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1017:0,63,255:28,0 chr1 220101729 . G . PASS END=220101739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:33,0 chr1 220101740 . G . PASS END=220101740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:30,0 chr1 220101741 . C . PASS END=220101745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:31,0 chr1 220101746 . A . PASS END=220101746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1065:0,60,255:29,0 chr1 220101747 . G . PASS END=220101760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:32,0 chr1 220101761 . T . PASS END=220101761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1018:0,79,255:28,0 chr1 220101762 . C . PASS END=220101764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:29,0 chr1 220101765 . G . PASS END=220101765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 220101766 . C . PASS END=220101768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 220101769 . G . PASS END=220101776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1072:0,76,255:26,0 chr1 220101777 . G . PASS END=220101778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 220101779 . C . PASS END=220101780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:67:28:0,67,970:0,67,255:27,0 chr1 220101781 . A . PASS END=220101782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,936:0,84,255:28,0 chr1 220101801 . C . PASS END=220101802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 220101850 . G . PASS END=220101850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 220101852 . G . PASS END=220101852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 220131910 . C . PASS END=220132097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1231:0,86,255:40,0 chr1 220132098 . G . PASS END=220132098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:29,0 chr1 220132099 . C . PASS END=220132104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 220132105 . T . PASS END=220132108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr1 220132109 . G . PASS END=220132115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,86,255:29,0 chr1 220132116 . A . PASS END=220132116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 220132117 . A . PASS END=220132119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 220132120 . C . PASS END=220132121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 220132122 . C . PASS END=220132234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,995:0,84,255:35,0 chr1 220132235 . A . PASS END=220132235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr1 220132236 . A . PASS END=220132327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:35:0,91,1327:0,91,255:40,0 chr1 220132328 . T . PASS END=220132339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1372:0,101,255:35,0 chr1 220132340 . T . PASS END=220132340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1126:0,74,255:30,0 chr1 220132341 . C . PASS END=220132345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1255:0,89,255:31,0 chr1 220132346 . G . PASS END=220132346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:30,0 chr1 220132347 . G . PASS END=220132359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:30,0 chr1 220132360 . T . PASS END=220132360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 220142148 . T . PASS END=220142298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:34:0,102,1296:0,102,255:40,0 chr1 220142400 . C . PASS END=220142464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:71:0,120,1800:0,203,255:40,0 chr1 220145411 . C . PASS END=220145489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:39:0,111,1643:0,116,255:40,0 chr1 220146580 . C . PASS END=220146740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:87:36:0,87,1305:0,108,255:40,0 chr1 220151888 . C . PASS END=220151888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 220151889 . T . PASS END=220151889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 220151890 . T . PASS END=220152061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:29:0,84,1143:0,86,255:40,0 chr1 220152760 . C . PASS END=220152761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 220152762 . G . PASS END=220152957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:28:0,81,1215:0,84,255:40,0 chr1 220153427 . C . PASS END=220153582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:96:45:0,96,1440:0,102,255:40,0 chr1 220154098 . C . PASS END=220154110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1082:0,86,255:36,0 chr1 220154111 . T . PASS END=220154111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr1 220154112 . C . PASS END=220154199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:37:0,84,1260:0,105,255:40,0 chr1 220154720 . C . PASS END=220154730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:61:0,120,1800:0,176,255:40,0 chr1 220154731 . A . PASS END=220154767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:65:0,120,1800:0,156,255:40,1 chr1 220154768 . C T, 48.12 PASS DP=68;MQ=249.96;MQRankSum=6.523;ReadPosRankSum=3.336;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,29,0:0.426,0.000:68:20,19,0:19,10,0:47:83,0,50,1023,1360,2383:255,0,255:32,0:4.8120e+01,8.8790e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,20,14,15:24,15,16,13 chr1 220154769 . T . PASS END=220154799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:47:0,111,1755:0,111,255:40,0 chr1 220156114 . C . PASS END=220156127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,124,255:40,0 chr1 220156128 . G . PASS END=220156186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,146,255:40,0 chr1 220156531 . C . PASS END=220156531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 220156532 . T . PASS END=220156536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:26,0 chr1 220156537 . G . PASS END=220156541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 220156542 . A . PASS END=220156542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,865:0,67,255:27,0 chr1 220156543 . G . PASS END=220156712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:28:0,83,1033:0,83,255:40,0 chr1 220156713 . A . PASS END=220156719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 220156720 . C . PASS END=220156720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:24,0 chr1 220156721 . A . PASS END=220156737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:25,0 chr1 220156738 . G . PASS END=220156738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 220156739 . A . PASS END=220156740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 220157548 . C . PASS END=220157599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:84:0,120,1800:0,229,255:40,0 chr1 220160484 . C . PASS END=220160484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr1 220160485 . T . PASS END=220160485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 220160486 . G . PASS END=220160491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,892:0,65,255:26,0 chr1 220160492 . T . PASS END=220160497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr1 220160498 . A . PASS END=220160500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 220160501 . C . PASS END=220160706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:32:0,81,1189:0,83,255:40,1 chr1 220160707 . T . PASS END=220160710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 220160711 . C . PASS END=220160715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 220160716 . G . PASS END=220160716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 220160717 . G . PASS END=220160719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 220160720 . T . PASS END=220160720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 220160721 . T . PASS END=220160723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr1 220160724 . T . PASS END=220160724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 220160725 . G . PASS END=220160727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 220160728 . C . PASS END=220160729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:22,0 chr1 220160730 . G . PASS END=220160746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:18:0,45,675:0,54,255:19,0 chr1 220161932 . C . PASS END=220162130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1148:0,82,255:40,0 chr1 220162131 . G . PASS END=220162136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 220162137 . A . PASS END=220162144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:26:0,57,855:0,62,255:19,0 chr1 220162145 . T . PASS END=220162149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:20,0 chr1 220162150 . C . PASS END=220162150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 220162151 . T . PASS END=220162157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,638:0,60,255:20,0 chr1 220162158 . A . PASS END=220162165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 220170325 . C . PASS END=220170664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:28:0,81,1215:0,84,255:40,0 chr1 220170665 . T . PASS END=220170666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 220170667 . C . PASS END=220170671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 220170672 . A . PASS END=220170672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 220170673 . A . PASS END=220170673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:23,0 chr1 220170674 . G . PASS END=220170679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr1 220170680 . G . PASS END=220170684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:25:0,45,675:0,68,255:17,0 chr1 220174480 . C . PASS END=220174578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:38:0,81,1215:0,101,255:40,0 chr1 220174579 . T . PASS END=220174579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:28,0 chr1 220174580 . T . PASS END=220174580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 220174581 . C . PASS END=220174597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:27,0 chr1 220178590 . C . PASS END=220178673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:49:0,120,1800:0,130,255:40,0 chr1 220178674 . C . PASS END=220178700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:93:63:0,93,1395:0,173,255:40,0 chr1 220178701 . T . PASS END=220178702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:60:63:0,60,900:0,189,255:23,0 chr1 220179448 . C . PASS END=220179453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr1 220179454 . G . PASS END=220179454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:20,0 chr1 220179455 . T . PASS END=220179458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 220179459 . T . PASS END=220179459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 220179460 . G . PASS END=220179462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,848:0,64,255:26,0 chr1 220179463 . G . PASS END=220179463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr1 220179464 . A . PASS END=220179464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 220179465 . C . PASS END=220179655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:30:0,81,1079:0,81,255:40,0 chr1 220180544 . T . PASS END=220180546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 220180547 . T . PASS END=220180547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1396:0,73,255:37,0 chr1 220180548 . G . PASS END=220180680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:35:0,87,1305:0,98,255:40,0 chr1 220184288 . C . PASS END=220184395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:37:0,83,1184:0,83,255:40,0 chr1 220184396 . A . PASS END=220184396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:29,0 chr1 220184397 . A . PASS END=220184398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,108,255:31,0 chr1 220191468 . C . PASS END=220191479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,113,1800:0,113,255:40,0 chr1 220191480 . A . PASS END=220191480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,9:73:54:73:0,54,1712:0,54,255:40,0 chr1 220191481 . G . PASS END=220191488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,219,255:40,0 chr1 220191791 . C . PASS END=220191850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:60:0,119,1800:0,119,255:40,0 chr1 220192337 . C . PASS END=220192421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:42:0,84,1198:0,84,255:40,0 chr1 220193330 . C . PASS END=220193549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:83:38:0,83,1268:0,83,255:40,0 chr1 220193550 . A . PASS END=220193550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:32,0 chr1 220193551 . T . PASS END=220193557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,98,255:33,0 chr1 220193558 . T . PASS END=220193563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:26,0 chr1 220195689 . T . PASS END=220195860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,111,1665:0,117,255:40,0 chr1 220197606 . G . PASS END=220197609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 220197610 . T . PASS END=220197615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,999:0,81,255:28,0 chr1 220197616 . A . PASS END=220197616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr1 220197617 . T . PASS END=220197624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:33,0 chr1 220197625 . G T, 148.87 PASS DP=35;MQ=250.00;FractionInformativeReads=0.971 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:99:187,102,0,1289,102,1289:255,105,0:0,0:1.4887e+02,9.8870e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,10:0,0,20,14 chr1 220197626 . T . PASS END=220197662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:36:0,91,1382:0,91,255:40,0 chr1 220197663 . C . PASS END=220197798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:38:0,101,1449:0,101,255:40,0 chr1 220198474 . C . PASS END=220198570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:32:0,88,1180:0,88,255:40,0 chr1 220198571 . G . PASS END=220198571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:30,0 chr1 220198572 . C . PASS END=220198586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:31,0 chr1 220198587 . C . PASS END=220198592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,900:0,77,255:25,0 chr1 220198593 . G . PASS END=220198593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,65,255:18,0 chr1 220198594 . T . PASS END=220198600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,839:0,69,255:23,0 chr1 220203728 . C . PASS END=220203822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,101,1365:0,101,255:40,0 chr1 220205729 . C . PASS END=220205736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,912:0,80,255:36,0 chr1 220205737 . C . PASS END=220205778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:91:36:0,91,1167:0,91,255:40,0 chr1 220205779 . A . PASS END=220205779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1506:0,63,255:38,0 chr1 220205780 . G . PASS END=220205861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:32:0,84,1260:0,96,255:40,0 chr1 220205862 . G . PASS END=220205862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 220205863 . C . PASS END=220205868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:28,0 chr1 220206844 . C . PASS END=220206979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:41:0,84,1443:0,84,255:40,0 chr1 220206980 . G . PASS END=220207000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1260:0,92,255:35,0 chr1 220208256 . C . PASS END=220208355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:55:0,120,1800:0,161,255:40,0 chr1 220213527 . T . PASS END=220213611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,165,255:40,0 chr1 220219685 . C . PASS END=220219687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 220219688 . G . PASS END=220219700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr1 220219701 . T . PASS END=220219701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr1 220219702 . G . PASS END=220219704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 220219705 . T . PASS END=220219705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,858:0,59,255:24,0 chr1 220219706 . T . PASS END=220219730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,951:0,65,255:26,0 chr1 220232186 . T . PASS END=220232319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1143:0,90,255:40,0 chr1 220232320 . T . PASS END=220232334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,939:0,75,255:26,0 chr1 220233028 . C . PASS END=220233133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,117,1755:0,131,255:40,0 chr1 220236099 . C . PASS END=220236108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:26,0 chr1 220236109 . G . PASS END=220236109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 220236110 . C . PASS END=220236110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 220236111 . T . PASS END=220236282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,972:0,81,255:40,0 chr1 220236283 . G . PASS END=220236283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:30,0 chr1 220236284 . C . PASS END=220236285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1318:0,92,255:33,0 chr1 220236286 . T . PASS END=220236286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1211:0,77,255:30,0 chr1 220236287 . C . PASS END=220236296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1279:0,89,255:34,0 chr1 220237623 . T . PASS END=220237757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:51:0,120,1800:0,143,255:40,0 chr1 220239415 . C . PASS END=220239447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:76:0,120,1800:0,190,255:40,0 chr1 220239448 . T C, 236.04 PASS DP=76;MQ=249.99;MQRankSum=1.641;ReadPosRankSum=0.866;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,75,0:0.987,0.000:76:0,39,0:1,36,0:186:274,189,0,374,374,374:255,190,0:1,0:2.3604e+02,1.8604e+02,0.0000e+00,3.7081e+02,4.0558e+02,3.7382e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,33,42:1,0,43,32 chr1 220239449 . T . PASS END=220239459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:71:0,120,1800:0,209,255:40,0 chr1 220240644 . C . PASS END=220240735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,2:116:99:91:0,120,1800:0,245,255:40,0 chr1 220242726 . C . PASS END=220242774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,123,255:40,0 chr1 220246192 . A . PASS END=220246192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 220246193 . T . PASS END=220246299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:28:0,81,1172:0,84,255:40,0 chr1 220247309 . C . PASS END=220247408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:38:0,98,1341:0,98,255:40,0 chr1 220247409 . C . PASS END=220247413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:75:39:0,75,1125:0,117,255:26,0 chr1 220253069 . C . PASS END=220253177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:87:38:0,87,1305:0,92,255:40,0 chr1 220253178 . C . PASS END=220253183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:62:30:0,62,1035:0,62,255:25,0 chr1 220253184 . G . PASS END=220253184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 220253185 . C . PASS END=220253188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,74,255:20,0 chr1 220267559 . A . PASS END=220267567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 220267568 . G . PASS END=220267597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:18,0 chr1 220267598 . G . PASS END=220267639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:26,0 chr1 220267640 . C . PASS END=220267640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 220267641 . C . PASS END=220267641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:26,0 chr1 220267642 . C . PASS END=220267644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 220267645 . C . PASS END=220267652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:27,0 chr1 220267653 . G . PASS END=220267653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 220267654 . A . PASS END=220267654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:26,0 chr1 220267655 . T . PASS END=220267655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 220267656 . G . PASS END=220267658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 220267659 . A . PASS END=220267659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr1 220267660 . A . PASS END=220267684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1133:0,82,255:34,0 chr1 220267685 . C . PASS END=220267685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1147:0,47,255:31,0 chr1 220267686 . G . PASS END=220267691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 220267692 . T . PASS END=220267692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr1 220267693 . C . PASS END=220267697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:29,0 chr1 220267698 . G . PASS END=220267698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:28,0 chr1 220267699 . G . PASS END=220267718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1133:0,83,255:31,0 chr1 220267719 . A . PASS END=220267719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,963:0,32,255:28,0 chr1 220267720 . C . PASS END=220267725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr1 220267726 . T . PASS END=220267727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1041:0,63,255:30,0 chr1 220267728 . G . PASS END=220267738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:31,0 chr1 220267739 . C . PASS END=220267749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1008:0,71,255:26,0 chr1 220267750 . G . PASS END=220267750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:25,0 chr1 220267751 . C . PASS END=220267778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,914:0,62,255:26,0 chr1 220267779 . A . PASS END=220267789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,58,255:19,0 chr1 220267790 . C . PASS END=220267794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 220267795 . G . PASS END=220267804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr1 220267805 . A . PASS END=220267805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:16,0 chr1 220267806 . C . PASS END=220267814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:17,0 chr1 220267815 . A . PASS END=220267815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 220267816 . G . PASS END=220267817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 220267818 . T . PASS END=220267818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 220267819 . C . PASS END=220267825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 220269446 . A . PASS END=220269472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,168,255:40,0 chr1 220269473 . T . PASS END=220269568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:54:0,120,1800:0,150,255:40,0 chr1 220273832 . A . PASS END=220273838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 220273839 . A . PASS END=220273981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:27:0,80,984:0,80,255:40,0 chr1 220273982 . A . PASS END=220273983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:27,0 chr1 220273984 . A . PASS END=220273990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:28,0 chr1 220273991 . G . PASS END=220273991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 220275471 . C . PASS END=220275477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,110,1490:0,110,255:40,0 chr1 220275478 . A . PASS END=220275478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:38,0 chr1 220275479 . T . PASS END=220275619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,120,1800:0,125,255:40,0 chr1 220275705 . G . PASS END=220275754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:54:0,110,1800:0,110,255:40,0 chr1 220275837 . G . PASS END=220275946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,117,1755:0,118,255:40,0 chr1 220276029 . A . PASS END=220276119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:35:0,91,1258:0,91,255:40,0 chr1 220276789 . G . PASS END=220276904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:41:0,117,1755:0,120,255:40,0 chr1 220279233 . G . PASS END=220279386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:31:0,87,1113:0,93,255:40,0 chr1 220279387 . G . PASS END=220279387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 220279388 . C . PASS END=220279395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:32,0 chr1 220279396 . G . PASS END=220279397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 220279398 . C . PASS END=220279400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 220279401 . T . PASS END=220279402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:24,0 chr1 220280403 . G . PASS END=220280493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,138,255:40,0 chr1 220284128 . T . PASS END=220284279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,112,1551:0,112,255:40,0 chr1 220287656 . G . PASS END=220287809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1215:0,85,255:40,0 chr1 220287810 . T . PASS END=220287814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr1 220287815 . A . PASS END=220287816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,810:0,50,255:18,0 chr1 220298579 . C . PASS END=220298681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:36:0,88,1277:0,88,255:40,0 chr1 220300092 . G . PASS END=220300185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:49:0,120,1800:0,147,255:40,0 chr1 220307744 . G . PASS END=220307852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,130,255:40,0 chr1 220310151 . G . PASS END=220310253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:32:0,96,1188:0,96,255:40,0 chr1 220311260 . G . PASS END=220311262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1241:0,99,255:33,0 chr1 220311263 . C . PASS END=220311263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:32,0 chr1 220311264 . A . PASS END=220311386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:33:0,81,1215:0,99,255:40,0 chr1 220312350 . C . PASS END=220312481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:45:0,118,1382:0,118,255:40,0 chr1 220313525 . A . PASS END=220313631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:50:0,87,1710:0,87,255:40,0 chr1 220315145 . G . PASS END=220315145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1350:0,90,255:39,0 chr1 220315146 . C . PASS END=220315146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1114:0,56,255:36,0 chr1 220315147 . T . PASS END=220315147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1405:0,106,255:39,0 chr1 220315148 . C . PASS END=220315148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:21:46:0,21,1105:0,21,255:36,0 chr1 220315149 . T . PASS END=220315149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 220315150 . A . PASS END=220315150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1297:0,58,255:39,0 chr1 220315151 . T . PASS END=220315154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr1 220315155 . G . LowGQ END=220315155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,11:47:0:47:0,0,1036:56,0,255:33,0 chr1 220315156 . A . PASS END=220315158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 220315159 . A . PASS END=220315159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,8:45:2:45:0,2,1048:0,2,255:37,0 chr1 220315160 . G . PASS END=220315160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:45:0,85,1385:0,85,255:40,0 chr1 220315161 . G . PASS END=220315161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,8:46:5:46:0,5,1064:0,5,255:38,0 chr1 220315162 . A . PASS END=220315164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,125,255:40,0 chr1 220315165 . A . PASS END=220315165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:57:47:0,57,1221:0,57,255:40,0 chr1 220315166 . T . PASS END=220315168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:66:47:0,66,1205:0,66,255:40,0 chr1 220315169 . C . PASS END=220315173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,139,255:40,0 chr1 220315174 . A . LowGQ END=220315174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,9:56:0:56:0,0,1263:4,0,255:40,0 chr1 220315175 . A . PASS END=220315290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,102,1530:0,115,255:40,0 chr1 220316286 . A . PASS END=220316289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1078:0,87,255:33,0 chr1 220316290 . C . PASS END=220316290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:31,0 chr1 220316291 . A . PASS END=220316469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:33:0,81,1087:0,82,255:40,0 chr1 220316470 . A . PASS END=220316476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:31:0,63,945:0,93,255:26,0 chr1 220318851 . A . PASS END=220318995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:34:0,98,1402:0,98,255:40,0 chr1 220320835 . G . PASS END=220320961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:37:0,102,1530:0,111,255:40,0 chr1 220320962 . T . PASS END=220320962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:47:36:0,47,1182:0,47,255:31,0 chr1 220320963 . G . PASS END=220320977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1202:0,85,255:34,0 chr1 220321618 . A . PASS END=220321618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 220321692 . C . PASS END=220321692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 220321824 . C . PASS END=220321824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 220321898 . A . PASS END=220321898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 220321950 . A . PASS END=220321950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 220322040 . T . PASS END=220322040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 220322043 . C . PASS END=220322043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 220322075 . T . PASS END=220322075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,142,255:40,0 chr1 220322080 . C . PASS END=220322080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,129,255:40,1 chr1 220322143 . C . PASS END=220322143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 220322197 . A . PASS END=220322197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,218,255:40,0 chr1 220322207 . T . PASS END=220322207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,211,255:40,0 chr1 220322246 . A . PASS END=220322246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 220322253 . A . PASS END=220322253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 220322257 . A . PASS END=220322257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:99:55:0,116,1922:0,116,255:40,0 chr1 220322383 . C . PASS END=220322383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr1 220322417 . C . PASS END=220322417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr1 220322422 . T . PASS END=220322422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr1 220322491 . G . PASS END=220322491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr1 220322772 . G . PASS END=220322772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr1 220322802 . A . PASS END=220322802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr1 220323033 . T . PASS END=220323034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1396:0,111,255:37,0 chr1 220323055 . A . PASS END=220323055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 220323123 . C . PASS END=220323123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 220323140 . A . PASS END=220323140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr1 220323253 . A . PASS END=220323253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1251:0,102,255:34,0 chr1 220323258 . G . PASS END=220323258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr1 220323793 . CTTT CTT,CT,C,CTTTT, 4.06 DRAGENIndelHardQUAL DP=64;MQ=245.47;MQRankSum=4.668;ReadPosRankSum=0.241;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,14,4,5,8,0:0.222,0.063,0.079,0.127,0.000:63:23,5,2,3,5,0:9,9,2,2,3,0:4:4,0,50,44,170,94,68,201,390,118,79,114,197,253,129,27,103,192,239,160,138:255,0,255:34,43:4.0603e+00,2.1656e+00,5.5166e+01,4.6129e+01,1.7461e+02,9.9129e+01,7.0577e+01,2.0553e+02,3.9385e+02,1.2358e+02,8.1110e+01,1.1846e+02,2.0092e+02,2.5689e+02,1.3411e+02,6.2019e+01,1.3949e+02,2.2893e+02,2.7612e+02,1.9653e+02,1.7594e+02:0.00,2.00,5.00,2.00,4.00,5.00,2.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,5.00,34.77,36.77,36.77,36.77,36.77,37.77:13,19,12,19:14,18,10,21 chr1 220323816 . A . PASS END=220323816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,3:69:99:69:0,120,1800:0,135,255:40,0 chr1 220324056 . C . PASS END=220324056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 220324084 . C . PASS END=220324084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 220324157 . T . PASS END=220324157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 220324176 . T . PASS END=220324176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 220324202 . G . PASS END=220324202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr1 220324219 . A . PASS END=220324219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr1 220324485 . A . PASS END=220324485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr1 220324489 . A . PASS END=220324489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:85:0,120,1800:0,239,255:40,0 chr1 220324515 . C . PASS END=220324515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:89:0,120,1800:0,251,255:40,0 chr1 220324593 . T . PASS END=220324748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:55:0,120,1800:0,166,255:40,0 chr1 220324948 . C . PASS END=220324954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr1 220324955 . T . PASS END=220324955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1108:0,41,255:29,0 chr1 220324956 . T . PASS END=220324960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:31,0 chr1 220324961 . C . PASS END=220325102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,82,255:40,0 chr1 220325103 . T . PASS END=220325104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:26,0 chr1 220325105 . G . PASS END=220325105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1009:0,51,255:21,0 chr1 220325106 . C . PASS END=220325106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 220325114 . T . PASS END=220325114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 220325116 . G . PASS END=220325116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:18,0 chr1 220326514 . G . PASS END=220326514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 220326527 . C . PASS END=220326527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 220326528 . T . PASS END=220326530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,898:0,84,255:29,0 chr1 220326531 . T . PASS END=220326531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 220326532 . C . PASS END=220326710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:34:0,81,1188:0,89,255:40,0 chr1 220326711 . T . PASS END=220326748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,848:0,69,255:25,0 chr1 220327310 . C . PASS END=220327399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:59:0,120,1800:0,138,255:40,0 chr1 220330612 . C . PASS END=220330613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 220330614 . T . PASS END=220330618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 220330619 . T . PASS END=220330619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,906:0,29,255:24,0 chr1 220330620 . C . PASS END=220330628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,895:0,65,255:26,0 chr1 220330629 . A . PASS END=220330633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 220330634 . G . PASS END=220330635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,976:0,65,255:26,0 chr1 220330636 . C . PASS END=220330636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 220330637 . T . PASS END=220330637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 220330638 . T . PASS END=220330638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr1 220330639 . C . PASS END=220330641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 220330642 . G . PASS END=220330642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 220330643 . G . PASS END=220330643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 220330644 . T . PASS END=220330644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 220330645 . C . PASS END=220330646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 220330647 . T . PASS END=220330647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr1 220330648 . C . PASS END=220330649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 220330650 . G . PASS END=220330650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr1 220330651 . A . PASS END=220330659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:31,0 chr1 220330660 . C . PASS END=220330660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:28,0 chr1 220330661 . A . PASS END=220330665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:29,0 chr1 220330666 . T . PASS END=220330666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:28,0 chr1 220330667 . G . PASS END=220330748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1263:0,86,255:39,0 chr1 220330749 . T . PASS END=220330749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr1 220330750 . G . PASS END=220330795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,100,255:38,0 chr1 220330796 . A . PASS END=220330815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:26,0 chr1 220330816 . C . PASS END=220330823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 220330824 . C . PASS END=220330825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 220330826 . T . PASS END=220330826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 220330827 . C . PASS END=220330830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 220331144 . C . PASS END=220331218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,168,255:40,0 chr1 220332728 . C . PASS END=220332763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,204,255:40,0 chr1 220335540 . C . PASS END=220335610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:84:0,120,1800:0,225,255:40,0 chr1 220338072 . T . PASS END=220338072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,255,255:40,0 chr1 220338075 . C . PASS END=220338141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:83:0,120,1800:0,233,255:40,0 chr1 220340635 . C . PASS END=220340741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:85:35:0,85,1295:0,85,255:40,0 chr1 220340748 . G . PASS END=220340748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 220340844 . C . PASS END=220341011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:40:0,87,1305:0,113,255:40,0 chr1 220341012 . T . PASS END=220341017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:37:0,69,1035:0,111,255:26,0 chr1 220344234 . C . PASS END=220344243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,967:0,65,255:26,0 chr1 220344244 . T . PASS END=220344244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 220344245 . T . PASS END=220344245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:27,0 chr1 220344246 . C . PASS END=220344246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 220344247 . T . PASS END=220344247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,968:0,57,255:27,0 chr1 220344248 . A . PASS END=220344248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 220344249 . A . PASS END=220344260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1058:0,84,255:30,0 chr1 220344261 . C . PASS END=220344261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 220344262 . A . PASS END=220344274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1243:0,91,255:35,0 chr1 220344275 . A . PASS END=220344275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr1 220344276 . G . PASS END=220344435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:35:0,92,1303:0,92,255:40,0 chr1 220344436 . A . PASS END=220344436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr1 220344437 . T . PASS END=220344447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:33,0 chr1 220344448 . A . PASS END=220344452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr1 220344453 . T . PASS END=220344453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,911:0,57,255:24,0 chr1 220344454 . T . PASS END=220344459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 220344460 . A . PASS END=220344461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 220344462 . A . PASS END=220344462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr1 220345231 . T . PASS END=220345389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:33:0,82,1157:0,82,255:40,0 chr1 220345390 . C . PASS END=220345391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:21,0 chr1 220345969 . C . PASS END=220345969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1535:0,110,255:39,0 chr1 220345979 . C . PASS END=220346084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:45:0,111,1590:0,111,255:40,0 chr1 220355599 . C . PASS END=220355651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:47:0,120,1800:0,136,255:40,1 chr1 220355652 . C . PASS END=220355652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:65:59:0,65,2012:0,65,255:40,1 chr1 220355653 . A . PASS END=220355697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:98:44:0,98,1582:0,98,255:40,1 chr1 220356060 . C . PASS END=220356273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:55:0,120,1800:0,133,255:40,0 chr1 220356284 . G . PASS END=220356284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 220357378 . A . PASS END=220357505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:44:0,120,1800:0,122,255:40,0 chr1 220358993 . C . PASS END=220359083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:77:0,120,1800:0,215,255:40,0 chr1 220363045 . T . PASS END=220363109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:97:0,120,1800:0,255,255:40,0 chr1 220363117 . G . PASS END=220363117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:90:0,120,1800:0,254,255:40,0 chr1 220363406 . C . PASS END=220363488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:77:0,120,1800:0,198,255:40,0 chr1 220363711 . C . PASS END=220363711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 220363713 . C . PASS END=220363713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 220363719 . C . PASS END=220363862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,99,1485:0,120,255:40,0 chr1 220364410 . C . PASS END=220364410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 220364411 . T . PASS END=220364612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:90:30:0,90,1133:0,90,255:40,0 chr1 220364613 . T . PASS END=220364613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1382:0,76,255:36,0 chr1 220364614 . G . PASS END=220364622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1305:0,117,255:37,0 chr1 220364623 . T . PASS END=220364626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:37:0,69,1035:0,111,255:23,0 chr1 220366582 . C . PASS END=220366721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:32:0,80,1163:0,80,255:40,0 chr1 220366725 . A . PASS END=220366725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 220368420 . C . PASS END=220368509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1259:0,85,255:40,0 chr1 220368640 . C . PASS END=220368719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:57:0,120,1800:0,131,255:40,0 chr1 220368721 . T . PASS END=220368721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 220369579 . A . PASS END=220369579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 220369592 . C . PASS END=220369702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:33:0,99,1134:0,99,255:40,0 chr1 220369703 . A . PASS END=220369737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:44:0,87,1305:0,116,255:40,0 chr1 220369738 . T . PASS END=220369740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,101,255:25,0 chr1 220375618 . C . PASS END=220375716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,103,1755:0,103,255:40,1 chr1 220375718 . T . PASS END=220375718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 220379249 . C . PASS END=220379316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:72:0,120,1800:0,203,255:40,1 chr1 220379317 . G . PASS END=220379348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:80:56:0,80,1800:0,80,255:40,0 chr1 220379361 . T . LowGQ END=220379362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,9:50:0:48:0,0,927:198,0,255:36,11 chr1 220383715 . A . PASS END=220383715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 220383730 . C . PASS END=220383831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,102,1530:0,126,255:40,0 chr1 220384143 . C . PASS END=220384218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:32:0,80,1177:0,80,255:40,0 chr1 220384297 . C . PASS END=220384344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:53:0,120,1800:0,159,255:40,0 chr1 220384346 . T . PASS END=220384346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 220384630 . A . PASS END=220384632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:24,0 chr1 220384633 . A . PASS END=220384633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:24,0 chr1 220384634 . C . PASS END=220384636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:24,0 chr1 220384637 . A . PASS END=220384637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:27,0 chr1 220384638 . C . PASS END=220384638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 220384639 . T . PASS END=220384639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:26,0 chr1 220384640 . G . PASS END=220384688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1141:0,80,255:37,0 chr1 220384689 . A . PASS END=220384689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:30,0 chr1 220384690 . C . PASS END=220384691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:33,0 chr1 220384692 . A . PASS END=220384693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1225:0,66,255:31,1 chr1 220384694 . C . PASS END=220384694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:54:35:0,54,1182:0,54,255:30,1 chr1 220384695 . T . PASS END=220384695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 220384696 . C . PASS END=220384711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1152:0,88,255:33,0 chr1 220384712 . C . PASS END=220384712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:28,0 chr1 220384713 . T . PASS END=220384719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 220386229 . C . PASS END=220386310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:63:0,120,1800:0,171,255:40,0 chr1 220387197 . C . PASS END=220387321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:47:0,103,1690:0,103,255:40,0 chr1 220406141 . A . PASS END=220406205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:75:0,120,1800:0,203,255:40,0 chr1 220445565 . T . PASS END=220445679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1096:0,90,255:40,0 chr1 220445699 . A . PASS END=220445699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 220445727 . T . PASS END=220445727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 220445747 . G . PASS END=220445747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 220445757 . G . PASS END=220445757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 220445765 . A . PASS END=220445766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 220445811 . C . PASS END=220445811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 220702165 . A . PASS END=220702178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 220702179 . G . PASS END=220702179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 220702180 . C . PASS END=220702210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 220702211 . A . PASS END=220702215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 220724567 . A . PASS END=220724573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 220724574 . C . PASS END=220724593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,947:0,64,255:26,0 chr1 220752696 . C . PASS END=220752696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 220752697 . A . PASS END=220752899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:81:27:0,81,994:0,81,255:40,0 chr1 220754407 . G . PASS END=220754472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:87:0,120,1800:0,245,255:40,0 chr1 220767340 . A . PASS END=220767384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:38:0,90,1350:0,114,255:40,0 chr1 220771673 . T . PASS END=220771690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:93:0,120,1800:0,165,255:40,0 chr1 220771691 . A . PASS END=220771721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:74:0,117,1800:0,117,255:40,0 chr1 220773140 . T . PASS END=220773205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:77:0,120,1800:0,205,255:40,0 chr1 220777409 . G . PASS END=220777479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,171,255:40,0 chr1 220789281 . A . PASS END=220789310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:64:0,120,1800:0,185,255:40,0 chr1 220789311 . A . PASS END=220789337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:88:0,120,1800:0,193,255:40,0 chr1 220791652 . G . PASS END=220791888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:33:0,81,1257:0,81,255:40,0 chr1 220791978 . G . PASS END=220792097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,107,1502:0,107,255:40,0 chr1 220792313 . T . PASS END=220792327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,113,1590:0,113,255:40,0 chr1 220804377 . C . PASS END=220804476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,161,255:40,0 chr1 220805543 . A . PASS END=220805655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:48:0,120,1800:0,131,255:40,0 chr1 220808718 . T . PASS END=220808718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,95,255:31,0 chr1 220808719 . T . PASS END=220808720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 220808721 . G . PASS END=220808722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,942:0,40,255:27,0 chr1 220808723 . A . PASS END=220808723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:27,0 chr1 220808724 . G . PASS END=220808724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,947:0,46,255:26,0 chr1 220808725 . G . PASS END=220808726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:32:0,60,1097:0,60,255:27,0 chr1 220808727 . G . PASS END=220808729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,85,255:28,0 chr1 220808730 . G . PASS END=220808731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1012:0,68,255:28,0 chr1 220808732 . A . PASS END=220808732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:27,0 chr1 220808733 . T . PASS END=220808733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1235:0,56,255:35,0 chr1 220808734 . C . PASS END=220808734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1277:0,78,255:36,0 chr1 220808735 . G . PASS END=220808739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1327:0,87,255:39,0 chr1 220808740 . C . PASS END=220808740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1335:0,65,255:37,0 chr1 220808741 . C . PASS END=220808858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:37:0,84,1230:0,84,255:40,0 chr1 220808859 . T . PASS END=220808859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:77:39:0,77,1135:0,77,255:31,0 chr1 220808860 . T . PASS END=220808860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 220808861 . C . PASS END=220808861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1187:0,78,255:30,0 chr1 220808862 . A . PASS END=220808865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,102,255:30,0 chr1 220808866 . A . PASS END=220808866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,931:0,35,255:25,0 chr1 220808867 . T . PASS END=220808867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:29,0 chr1 220808868 . C . PASS END=220808868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr1 220808869 . A . PASS END=220808869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 220808870 . T . PASS END=220808870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 220808871 . G . PASS END=220808871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 220809175 . C . PASS END=220809183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,925:0,72,255:26,0 chr1 220809184 . C . PASS END=220809191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:31,0 chr1 220809192 . C . PASS END=220809192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 220809193 . C . PASS END=220809352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:30:0,83,1194:0,83,255:40,0 chr1 220809353 . T . PASS END=220809354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 220809355 . C . PASS END=220809358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 220809359 . T . PASS END=220809359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,893:0,54,255:19,0 chr1 220809360 . A . PASS END=220809363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,900:0,71,255:20,0 chr1 220809364 . C . PASS END=220809368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:30:0,51,765:0,90,255:18,0 chr1 220823962 . A . PASS END=220824062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:54:0,120,1800:0,158,255:40,0 chr1 220825328 . C . PASS END=220825461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:29:0,80,1215:0,80,255:40,0 chr1 220825462 . T . PASS END=220825463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,85,255:26,0 chr1 220825464 . A . PASS END=220825465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 220825466 . A . PASS END=220825478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,67,255:25,0 chr1 220825479 . G . PASS END=220825482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 220825483 . A . PASS END=220825483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 220825484 . C . PASS END=220825485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 220825486 . G . PASS END=220825492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,55,255:18,0 chr1 220826440 . C . PASS END=220826441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 220826442 . G . PASS END=220826447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr1 220826448 . C . PASS END=220826451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 220826452 . G . PASS END=220826459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 220826460 . C . PASS END=220826460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 220826461 . T . PASS END=220826481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,809:0,66,255:24,0 chr1 220826482 . C . PASS END=220826482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 220826483 . A . PASS END=220826483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 220826484 . G . PASS END=220826658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,88,255:40,0 chr1 220826659 . T . PASS END=220826664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:33:0,78,1170:0,89,255:26,0 chr1 220826665 . A . PASS END=220826667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 220826668 . C . PASS END=220826669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 220826670 . A . PASS END=220826674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 220826675 . A . PASS END=220826675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 220826676 . C . PASS END=220826680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 220826681 . A . PASS END=220826681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 220826682 . A . PASS END=220826692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 220826693 . A . PASS END=220826694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 220831132 . G . PASS END=220831176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,107,1467:0,107,255:40,0 chr1 220835154 . A . PASS END=220835508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:35:0,90,1345:0,93,255:40,0 chr1 220863745 . A . PASS END=220863748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 220863749 . C . PASS END=220863749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 220863750 . G . PASS END=220863757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,969:0,65,255:25,0 chr1 220863758 . C . PASS END=220863758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,914:0,26,255:23,0 chr1 220863759 . C . PASS END=220863764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,915:0,64,255:26,0 chr1 220863765 . C . PASS END=220863765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 220863766 . C . PASS END=220863771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr1 220863772 . A . PASS END=220863772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:24,0 chr1 220863773 . A . PASS END=220863782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr1 220863783 . C . PASS END=220863783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 220863784 . A . PASS END=220863814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,807:0,62,255:26,0 chr1 220863815 . G . PASS END=220863815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1014:0,35,255:26,0 chr1 220863816 . G . PASS END=220863830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr1 220863831 . C . PASS END=220863841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1054:0,74,255:26,0 chr1 220863842 . C . PASS END=220863854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 220863855 . G . PASS END=220863855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 220863856 . C . PASS END=220863878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:30,0 chr1 220863879 . G . PASS END=220863916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,856:0,62,255:26,0 chr1 220863917 . A . PASS END=220863922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 220863923 . G . PASS END=220863923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 220863924 . C . PASS END=220863924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:24,0 chr1 220863925 . C . PASS END=220863932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 220863933 . C . PASS END=220863935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 220863936 . G . PASS END=220863936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 220863937 . G . PASS END=220864005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1078:0,83,255:34,0 chr1 220864006 . G . PASS END=220864006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr1 220864007 . A . PASS END=220864008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 220864009 . C . PASS END=220864027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:61:25:0,61,854:0,61,255:26,0 chr1 220864028 . G . PASS END=220864028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 220864029 . G . PASS END=220864038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr1 220864039 . A . PASS END=220864039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 220864040 . A . PASS END=220864040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 220864041 . G . PASS END=220864041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 220864042 . A . PASS END=220864051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,886:0,69,255:24,0 chr1 220864052 . A . PASS END=220864053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,808:0,55,255:19,0 chr1 220869954 . A . PASS END=220869980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,576:0,40,255:19,0 chr1 220869981 . T . PASS END=220869993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,743:0,60,255:21,0 chr1 220869994 . T . PASS END=220869994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 220869995 . C . PASS END=220870009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:24,0 chr1 220870010 . C . PASS END=220870011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,823:0,42,255:24,0 chr1 220870012 . T . PASS END=220870017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr1 220870018 . C . PASS END=220870018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 220870019 . A . PASS END=220870019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 220870020 . G . PASS END=220870021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 220870022 . C . PASS END=220870023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 220870024 . A . PASS END=220870034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,970:0,60,255:26,0 chr1 220870035 . T . PASS END=220870035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,665:0,47,255:23,0 chr1 220870036 . T . PASS END=220870073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,831:0,69,255:24,0 chr1 220921874 . A . PASS END=220921876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 220921877 . G . PASS END=220921877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 220921878 . G . PASS END=220921888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 220921889 . T . PASS END=220921889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 220921890 . C . PASS END=220921890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 220921891 . C . PASS END=220921894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 220921895 . G . PASS END=220921895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 220921896 . C . PASS END=220921907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr1 220921908 . T . PASS END=220921916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,668:0,54,255:18,0 chr1 220921917 . C . PASS END=220921917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:14,0 chr1 220921918 . A . PASS END=220921926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr1 220921927 . C . PASS END=220921927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:12,0 chr1 220921928 . T . PASS END=220921928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,596:0,15,255:12,0 chr1 220921929 . G . PASS END=220921944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:14,0 chr1 220921945 . G C, 47.68 PASS DP=14;MQ=250.00;MQRankSum=2.933;ReadPosRankSum=1.867;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,5,0:0.357,0.000:14:4,2,0:5,3,0:47:82,0,50,179,293,472:152,0,255:9,0:4.7682e+01,9.5779e-05,5.3000e+01,1.7884e+02,3.2783e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,2,3:5,4,1,4 chr1 220921946 . G . PASS END=220921948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 220921949 . G . PASS END=220921949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 220921950 . C . PASS END=220921967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr1 220921968 . C . PASS END=220921968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 220921969 . C . PASS END=220921970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 220921971 . T . PASS END=220921972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 220921973 . G . PASS END=220921976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 220921977 . T . PASS END=220921982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 220921983 . C . PASS END=220922024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr1 220922025 . T . PASS END=220922025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 220922026 . G . PASS END=220922042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 220922043 . T . PASS END=220922049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 220922050 . G . PASS END=220922074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 220922075 . T . PASS END=220922075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 220922076 . G . PASS END=220922076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 220922077 . C . PASS END=220922079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 220922080 . A . PASS END=220922080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:11,0 chr1 220922081 . G . PASS END=220922086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,449:0,36,255:12,0 chr1 220922087 . C . LowGQ END=220922087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,294:33,0,255:10,0 chr1 220922088 . C . PASS END=220922101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 220922102 . G . PASS END=220922103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 220922104 . G . PASS END=220922108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 220922109 . C . PASS END=220922109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr1 220922110 . G . PASS END=220922131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 220922132 . A . PASS END=220922143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 220922144 . A . PASS END=220922145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 220924752 . A . PASS END=220924753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 220927710 . A . PASS END=220927722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,102,1530:0,108,255:36,0 chr1 220928289 . G . PASS END=220928304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:18,0 chr1 220928305 . A . PASS END=220928305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 220928306 . A . PASS END=220928308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 220928309 . A . PASS END=220928309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 220928310 . A . PASS END=220928328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,652:0,54,255:19,0 chr1 220928329 . G . PASS END=220928337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:22,0 chr1 220928338 . G . PASS END=220928339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 220928340 . G . PASS END=220928354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 220928355 . C . PASS END=220928355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 220928356 . A . PASS END=220928409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,869:0,66,255:25,0 chr1 220928410 . C . PASS END=220928410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 220928411 . A . PASS END=220928423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:22,0 chr1 220928424 . T . PASS END=220928424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 220928425 . A . PASS END=220928426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 220928427 . C . PASS END=220928462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,623:0,54,255:19,0 chr1 220935000 . G . PASS END=220935043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:40:0,93,1393:0,93,255:40,0 chr1 220935044 . C . PASS END=220935080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,173,255:40,0 chr1 220935081 . G A, 47.08 PASS DP=66;MQ=250.00;MQRankSum=6.860;ReadPosRankSum=4.317;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,27,0:0.409,0.000:66:16,16,0:23,11,0:46:82,0,50,927,1360,2287:255,0,255:36,0:4.7080e+01,1.0691e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,20,9,18:14,25,14,13 chr1 220935082 . T . PASS END=220935118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,111,1800:0,111,255:40,0 chr1 220935119 . G . PASS END=220935162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:44:0,104,1568:0,104,255:40,0 chr1 220936252 . G . PASS END=220936381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:34:0,86,1225:0,86,255:40,0 chr1 220936382 . C . PASS END=220936382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:57:45:0,57,1421:0,57,255:37,0 chr1 220936383 . T . PASS END=220936392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:41:0,84,1407:0,84,255:40,0 chr1 220953360 . G . PASS END=220953360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 220953361 . A . PASS END=220953362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:48:27:0,48,898:0,48,255:26,0 chr1 220953363 . A . PASS END=220953364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 220953365 . C . PASS END=220953366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 220953367 . G . PASS END=220953369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 220953370 . A . PASS END=220953370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 220953371 . T . PASS END=220953425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1143:0,87,255:40,0 chr1 220953510 . G . PASS END=220953512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 220953513 . T . PASS END=220953513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:32,0 chr1 220953514 . A . PASS END=220953571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,89,255:35,0 chr1 220953572 . C . PASS END=220953581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:28:0,68,1000:0,68,255:26,0 chr1 220955120 . C . PASS END=220955235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,107,1496:0,107,255:40,0 chr1 220955236 . T . PASS END=220955243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:72:44:0,72,1080:0,132,255:25,0 chr1 220957261 . G . PASS END=220957284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:61:0,120,1800:0,154,255:40,0 chr1 220960287 . A . PASS END=220960340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,31:0,3,31:3,0 chr1 220960341 . C . PASS END=220960364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 220960365 . G . PASS END=220960397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr1 220960398 . G . PASS END=220960414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 220960415 . A . PASS END=220960415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 220960416 . T . PASS END=220960426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 220960427 . G . PASS END=220960427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 220960428 . C . PASS END=220960455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr1 220960456 . C . PASS END=220960469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 220960470 . T . PASS END=220960470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 220960471 . G . PASS END=220960485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr1 220960486 . A . PASS END=220960486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 220960487 . A . PASS END=220960487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 220960488 . T . PASS END=220960488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:15,0 chr1 220960489 . C . PASS END=220960494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 220960495 . A . PASS END=220960495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,482:0,17,255:15,0 chr1 220960496 . G . PASS END=220960517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr1 220960518 . G . PASS END=220960518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:12,0 chr1 220960519 . A . PASS END=220960531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr1 220960532 . G . LowGQ END=220960532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:9,0 chr1 220960533 . G . PASS END=220960550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr1 220960551 . C . PASS END=220960551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 220960552 . T . PASS END=220960553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 220960554 . C . PASS END=220960557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 220960558 . A . PASS END=220960561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:11:0,15,225:0,33,255:5,0 chr1 220964287 . A . PASS END=220964312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:80:0,120,1800:0,226,255:40,0 chr1 220964833 . G . PASS END=220965006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:31:0,92,1149:0,92,255:40,0 chr1 220969985 . A . PASS END=220969990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr1 220969991 . C . PASS END=220969994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr1 220969995 . C . PASS END=220970000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 220970001 . A . PASS END=220970001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 220970002 . T . PASS END=220970008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:26,0 chr1 220970009 . C . PASS END=220970009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr1 220970010 . A . PASS END=220970011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 220970012 . G . PASS END=220970023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 220970024 . G . PASS END=220970024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 220970025 . G . PASS END=220970027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr1 220970028 . A G, 136.83 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,15,0:0,15,0:87:175,90,0,1118,90,1118:255,90,0:0,0:1.3683e+02,8.6835e+01,0.0000e+00,4.5000e+02,1.2160e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,10:0,0,19,11 chr1 220970029 . C . PASS END=220970065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1141:0,80,255:40,0 chr1 220970066 . C . PASS END=220970126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1226:0,84,255:40,0 chr1 220970127 . T . PASS END=220970127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr1 220970128 . T . PASS END=220970140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1131:0,80,255:31,0 chr1 220970141 . G . PASS END=220970147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,76,255:26,0 chr1 220971216 . A . PASS END=220971407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,120,1800:0,139,255:40,1 chr1 220971494 . A . PASS END=220971547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,165,255:40,0 chr1 220978394 . G . PASS END=220978455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,112,1800:0,112,255:40,0 chr1 220978545 . A . PASS END=220978613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:38:0,90,1350:0,98,255:40,0 chr1 220978614 . G . PASS END=220978614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:28,0 chr1 220978615 . A . PASS END=220978616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 220982201 . G . PASS END=220982234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:35:0,89,1278:0,89,255:40,0 chr1 220986634 . T . PASS END=220986634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 220986635 . T . PASS END=220986635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1139:0,36,255:32,0 chr1 220986636 . A . PASS END=220986754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,84,255:40,0 chr1 220986755 . C . PASS END=220986760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1109:0,65,255:26,0 chr1 221053200 . A . PASS END=221053248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,398:0,36,255:13,0 chr1 221053249 . G . PASS END=221053250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 221053251 . T . PASS END=221053251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 221053252 . C . PASS END=221053252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 221053253 . G . PASS END=221053275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 221053276 . G . PASS END=221053286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 221053287 . T . PASS END=221053287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 221053288 . G . PASS END=221053308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 221053309 . C . PASS END=221053309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 221053310 . C . PASS END=221053365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,615:0,41,255:19,0 chr1 221053366 . A . PASS END=221053383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 221053384 . A . PASS END=221053384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 221053385 . G . PASS END=221053387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 221053388 . C . PASS END=221053388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 221053389 . C . PASS END=221053389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:17,0 chr1 221053390 . T . PASS END=221053422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,50,255:19,0 chr1 221053423 . A . PASS END=221053423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:16,0 chr1 221053424 . C . PASS END=221053426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:18,0 chr1 221053427 . G . PASS END=221053427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 221053428 . G . PASS END=221053459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,714:0,57,255:19,0 chr1 221053460 . G . PASS END=221053460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr1 221053461 . G . PASS END=221053468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,676:0,43,255:20,0 chr1 221053469 . A . PASS END=221053483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:23,0 chr1 221053484 . C . PASS END=221053485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 221053486 . C . PASS END=221053486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 221053487 . C . PASS END=221053495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,884:0,69,255:23,0 chr1 221053496 . G . PASS END=221053496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 221053497 . G . PASS END=221053504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,892:0,69,255:23,0 chr1 221053505 . C . PASS END=221053510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr1 221053511 . C . PASS END=221053515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 221053516 . C . PASS END=221053535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,729:0,47,255:19,0 chr1 221053536 . T . PASS END=221053536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 221053537 . C . PASS END=221053540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 221053541 . G . PASS END=221053542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 221053543 . T . PASS END=221053543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,630:0,46,255:20,0 chr1 221053544 . C . PASS END=221053554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:22,0 chr1 221053555 . A . PASS END=221053555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 221053556 . C . PASS END=221053625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,889:0,61,255:26,0 chr1 221053626 . C . PASS END=221053626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:21,0 chr1 221053627 . G . PASS END=221053633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:23,0 chr1 221053634 . C . PASS END=221053639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr1 221053640 . G . PASS END=221053640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:17,0 chr1 221053641 . C . PASS END=221053685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr1 221053686 . A . PASS END=221053686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:15,0 chr1 221053687 . G . PASS END=221053693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 221053694 . T . PASS END=221053705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:15:0,32,540:0,32,255:13,0 chr1 221053706 . C . PASS END=221053706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 221053707 . T . PASS END=221053711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 221053712 . C . PASS END=221053732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:16,0 chr1 221053733 . T . PASS END=221053733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 221053734 . G . PASS END=221053749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 221053750 . C . PASS END=221053750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 221053751 . A . PASS END=221053760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr1 221053761 . C . PASS END=221053772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 221053773 . G . PASS END=221053774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr1 221053775 . A . PASS END=221053783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 221053784 . G . PASS END=221053784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr1 221053785 . C . PASS END=221053786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr1 221053787 . G . PASS END=221053791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:11:0,24,360:0,33,255:9,0 chr1 221054536 . A . PASS END=221054536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 221054537 . T . PASS END=221054537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 221054538 . C . PASS END=221054541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 221054542 . C . PASS END=221054552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 221054553 . A . PASS END=221054553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 221054554 . C . PASS END=221054555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 221054556 . G . PASS END=221054556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 221054557 . G . PASS END=221054562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 221054563 . G . PASS END=221054563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 221054564 . G . PASS END=221054570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,906:0,62,255:26,0 chr1 221054571 . G . PASS END=221054693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1025:0,84,255:40,0 chr1 221054694 . C . PASS END=221054694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1311:0,75,255:31,0 chr1 221054695 . A . PASS END=221054697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:31,0 chr1 221054698 . T . PASS END=221054715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr1 221055506 . G . PASS END=221055506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 221055507 . T . PASS END=221055516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:24,0 chr1 221055517 . G . PASS END=221055518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 221055519 . G . PASS END=221055536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,864:0,64,255:26,0 chr1 221055537 . G . PASS END=221055540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 221055541 . C . PASS END=221055541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 221055542 . A . PASS END=221055543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr1 221055544 . A . PASS END=221055544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 221055545 . C . PASS END=221055557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1094:0,87,255:33,0 chr1 221055558 . G . PASS END=221055558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:32,0 chr1 221055559 . C . PASS END=221055647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1197:0,83,255:39,0 chr1 221055648 . C . PASS END=221055648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:27,0 chr1 221055649 . C . PASS END=221055652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 221055653 . A . PASS END=221055657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr1 221055658 . C . PASS END=221055661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 221055662 . C . PASS END=221055667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 221055668 . T . PASS END=221055679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 221055680 . C . PASS END=221055680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 221055681 . G . PASS END=221055681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 221055682 . G . PASS END=221055690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 221057537 . G . PASS END=221057548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 221057549 . T . PASS END=221057577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr1 221057578 . C . PASS END=221057608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,537:0,48,255:16,0 chr1 221057609 . G . PASS END=221057636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,515:0,48,255:17,0 chr1 221057637 . G . PASS END=221057637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 221057638 . T . PASS END=221057645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 221057646 . C T, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.325;ReadPosRankSum=1.264;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:6,12,0:0.667,0.000:18:4,4,0:2,8,0:46:85,0,46,429,215,644:255,0,178:5,0:5.0000e+01,1.0380e-04,4.8572e+01,4.2919e+02,2.4936e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,7,5:3,3,5,7:221057646 chr1 221057647 . G . PASS END=221057661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:19,0 chr1 221057662 . G A, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.377;ReadPosRankSum=0.833;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:6,13,0:0.684,0.000:19:4,5,0:2,8,0:46:85,0,45,342,215,556:255,0,168:6,0:5.0000e+01,1.0872e-04,4.8236e+01,3.4179e+02,2.4937e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,7,6:4,2,7,6:221057646 chr1 221057663 . C . PASS END=221057664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 221057665 . G . PASS END=221057665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr1 221057666 . G . PASS END=221057669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 221057670 . A . PASS END=221057673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 221057674 . G . PASS END=221057699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr1 221057700 . C . PASS END=221057715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 221057716 . C . PASS END=221057726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 221057727 . C . PASS END=221057739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 221057740 . C . PASS END=221057747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 221057748 . A . PASS END=221057749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 221057750 . A . PASS END=221057750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 221057751 . C . PASS END=221057768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 221057769 . G . PASS END=221057785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 221057786 . C . LowGQ END=221057786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr1 221057787 . A . PASS END=221057840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 221057841 . C . PASS END=221057844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 221057845 . G . PASS END=221057853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 221057854 . G . PASS END=221057855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 221057856 . G . PASS END=221057856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 221057857 . C . PASS END=221057857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 221057858 . A . LowGQ END=221057858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,434:24,0,255:13,1 chr1 221057859 . G . PASS END=221057861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:10:15:0,10,486:0,10,255:14,1 chr1 221057862 . G . PASS END=221057862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:15,0 chr1 221057863 . C . PASS END=221057870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 221057871 . G . PASS END=221057871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 221057872 . C . PASS END=221057877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 221057878 . T . PASS END=221057878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr1 221057879 . T . PASS END=221057891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 221057892 . G . PASS END=221057892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 221057893 . C . PASS END=221057896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 221057897 . A . PASS END=221057897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr1 221057898 . G . PASS END=221057902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,604:0,45,255:16,0 chr1 221057903 . C . PASS END=221057903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 221057904 . T . PASS END=221057924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr1 221057925 . C . PASS END=221057925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr1 221057926 . G . PASS END=221057933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 221057934 . C . PASS END=221057934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr1 221057935 . C . PASS END=221057935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 221057936 . A . PASS END=221057936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:13,0 chr1 221057937 . G . PASS END=221057962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr1 221057963 . G . PASS END=221057988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,716:0,63,255:22,0 chr1 221057989 . A . PASS END=221057994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 221057995 . C . PASS END=221057999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 221058000 . C . PASS END=221058003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 221058004 . C . PASS END=221058006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 221058007 . A . PASS END=221058009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 221058010 . C . PASS END=221058010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 221058011 . C . PASS END=221058011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 221058012 . C . PASS END=221058020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr1 221058021 . C . PASS END=221058042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 221058043 . A . PASS END=221058046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 221875754 . T . PASS END=221875762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr1 221875763 . C . PASS END=221875763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr1 221875764 . G . PASS END=221875770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,825:0,62,255:26,0 chr1 221875771 . C . PASS END=221875778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1023:0,81,255:30,0 chr1 221875779 . A . PASS END=221875779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 221875780 . G . PASS END=221875798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1172:0,96,255:36,0 chr1 221875799 . C . PASS END=221875799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr1 221875800 . G . PASS END=221875950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,95,255:40,0 chr1 221875951 . T . PASS END=221875956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:26,0 chr1 221875957 . C . PASS END=221875957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:22,0 chr1 221875958 . G . PASS END=221875963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:24,0 chr1 221875964 . G . PASS END=221875970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 221875971 . C . PASS END=221876000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:26,0 chr1 221876001 . C . PASS END=221876019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,551:0,45,255:19,0 chr1 221879437 . C . PASS END=221879445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,676:0,57,255:19,0 chr1 221879446 . C . PASS END=221879456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:25,0 chr1 221879457 . T . PASS END=221879461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,938:0,81,255:27,0 chr1 221879462 . G . PASS END=221879464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 221879465 . C . PASS END=221879465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 221879466 . T . PASS END=221879502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1177:0,80,255:35,0 chr1 221879503 . G . PASS END=221879503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1218:0,53,255:34,0 chr1 221879504 . C . PASS END=221879507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1620:0,111,255:38,0 chr1 221879508 . T . PASS END=221879508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:37,0 chr1 221879509 . T . PASS END=221879625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1196:0,81,255:40,0 chr1 221879626 . C . PASS END=221879627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:27,0 chr1 221879628 . A . PASS END=221879645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:30,0 chr1 221879646 . A . PASS END=221879646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1070:0,52,255:25,0 chr1 221879647 . T . PASS END=221879656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr1 221879657 . C . PASS END=221879658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 221879659 . C . PASS END=221879660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 221879661 . G . PASS END=221879673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 221879674 . C . PASS END=221879684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,71,255:25,0 chr1 221879685 . G . PASS END=221879685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:23,0 chr1 221879686 . G . PASS END=221879702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr1 221879703 . A . PASS END=221879715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr1 221879716 . C . PASS END=221879735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:23,0 chr1 221879736 . T . PASS END=221879736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 221879737 . C . PASS END=221879744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 221879745 . T . PASS END=221879745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:22,0 chr1 221879746 . C . PASS END=221879750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 221879751 . A . PASS END=221879751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 221879752 . G . PASS END=221879767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,825:0,69,255:23,0 chr1 221879768 . A . PASS END=221879794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 221879795 . A . PASS END=221879800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 221879801 . A . PASS END=221879801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr1 221879802 . A . PASS END=221879808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 221910565 . T . PASS END=221910608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,130,255:40,0 chr1 221912276 . C . PASS END=221912297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:26,0 chr1 221912298 . G . PASS END=221912312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:28,0 chr1 221912313 . G . PASS END=221912313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 221912314 . G . PASS END=221912323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 221912324 . C . PASS END=221912330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:29,0 chr1 221912331 . A . PASS END=221912331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 221912332 . A . PASS END=221912344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr1 221912345 . G . PASS END=221912345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 221912346 . C . PASS END=221912346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 221912347 . A . PASS END=221912348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 221912349 . C . PASS END=221912358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr1 221912359 . G . PASS END=221912360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 221912361 . T C, 133.81 PASS DP=30;MQ=249.87;FractionInformativeReads=0.967 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:84:172,87,0,1071,87,1071:255,87,0:0,0:1.3381e+02,8.3810e+01,0.0000e+00,4.5000e+02,1.1858e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,11:0,0,14,15 chr1 221912362 . T . PASS END=221912362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 221912363 . C . PASS END=221912380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:31,0 chr1 221912381 . A . PASS END=221912393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:26,0 chr1 221912394 . T . PASS END=221912394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,943:0,56,255:24,0 chr1 221912395 . T . PASS END=221912398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr1 221912399 . A . PASS END=221912413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,930:0,65,255:26,0 chr1 221912414 . A . PASS END=221912600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1139:0,81,255:40,0 chr1 221912601 . G . PASS END=221912601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:31,0 chr1 221912602 . C . PASS END=221912623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 221912624 . A . PASS END=221912624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:30,0 chr1 221912625 . G . PASS END=221912737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,81,255:39,0 chr1 221912738 . T . PASS END=221912738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1303:0,62,255:35,0 chr1 221912739 . C . PASS END=221912770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1434:0,101,255:40,0 chr1 221912771 . T . PASS END=221912807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:34:0,92,1290:0,92,255:35,0 chr1 221912808 . T C, 47.09 PASS DP=36;MQ=249.84;MQRankSum=4.933;ReadPosRankSum=3.115;FractionInformativeReads=0.972;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,14,0:0.400,0.000:35:9,5,0:12,9,0:46:82,0,50,500,718,1218:255,0,255:17,0:4.7089e+01,1.0665e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,15,10,4:10,11,5,9 chr1 221912809 . T . PASS END=221912834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:33,0 chr1 221912835 . T . PASS END=221912835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:28,0 chr1 221912836 . G . PASS END=221912838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:29,0 chr1 221912839 . A . PASS END=221912845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,77,255:23,0 chr1 221912846 . A . PASS END=221912850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:23,0 chr1 221912851 . C . PASS END=221912851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 221912852 . T . PASS END=221912873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,969:0,65,255:25,0 chr1 221912874 . C . PASS END=221912874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 221912875 . A . PASS END=221912884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 221912885 . C . PASS END=221912885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 221912886 . A . PASS END=221912895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr1 221912896 . G . PASS END=221912899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:29,0 chr1 221912900 . A . PASS END=221912900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 221912901 . G . PASS END=221912911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:29,0 chr1 221912912 . T . PASS END=221912943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 221912944 . G . PASS END=221912965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1031:0,80,255:31,0 chr1 221912966 . T . PASS END=221912966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 221912967 . G . PASS END=221912973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr1 221912974 . C . PASS END=221912974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 221912975 . C . PASS END=221912977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 221912978 . G . PASS END=221912978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 221912979 . G . PASS END=221912981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 221912982 . G . PASS END=221912982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 221912983 . G . PASS END=221912992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 221912993 . G . PASS END=221913004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1039:0,74,255:26,0 chr1 221913005 . C . PASS END=221913015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:29,0 chr1 221913016 . T . PASS END=221913017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:27,0 chr1 221913018 . G . PASS END=221913028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 221913029 . G . PASS END=221913032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 221913033 . G . PASS END=221913034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 221913035 . C . PASS END=221913057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 221913058 . A . PASS END=221913076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 221913077 . A . PASS END=221913077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 221913078 . C . PASS END=221913086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,380:0,33,255:11,0 chr1 222695943 . T . PASS END=222695962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,473:0,48,255:19,0 chr1 222695963 . C . PASS END=222695968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 222695969 . T . PASS END=222695969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 222695970 . C . PASS END=222695976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:24,0 chr1 222695977 . G . PASS END=222696003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,87,255:33,0 chr1 222696004 . C . PASS END=222696005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,1 chr1 222696006 . T . PASS END=222696050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1248:0,92,255:38,0 chr1 222696051 . T . PASS END=222696051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1187:0,75,255:36,0 chr1 222696052 . C . PASS END=222696083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:36:0,91,1124:0,91,255:40,0 chr1 222696084 . T . PASS END=222696084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1482:0,77,255:38,0 chr1 222696085 . G . PASS END=222696161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,84,255:40,0 chr1 222696162 . T . PASS END=222696165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 222696166 . G . PASS END=222696169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 222696170 . C . PASS END=222696198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,745:0,74,255:26,0 chr1 222696199 . G . PASS END=222696199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 222696200 . A . PASS END=222696204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 222696205 . T . PASS END=222696205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 222696206 . C . PASS END=222696213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 222696214 . A . PASS END=222696223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:16,0 chr1 222696224 . C . PASS END=222696229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 222696954 . T . PASS END=222697036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:35:0,96,1296:0,96,255:40,0 chr1 222698293 . C . PASS END=222698349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:68:0,120,1800:0,188,255:40,0 chr1 222698480 . T . PASS END=222698483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 222698484 . G . PASS END=222698561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,162,255:40,0 chr1 222700311 . C . PASS END=222700336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:48:0,111,1535:0,111,255:40,0 chr1 222700337 . A . PASS END=222700373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,108,1507:0,108,255:40,0 chr1 222700374 . G A, 49.47 PASS DP=48;MQ=249.18;MQRankSum=5.907;ReadPosRankSum=1.748;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,22,0:0.458,0.000:48:13,10,0:13,12,0:48:84,0,50,779,901,1680:255,0,255:20,0:4.9468e+01,7.0928e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,14,7,15:15,11,15,7 chr1 222700375 . C . PASS END=222700392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:41:0,90,1545:0,90,255:40,0 chr1 222705308 . C . PASS END=222705326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,645:0,41,255:19,0 chr1 222705327 . G . PASS END=222705353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,754:0,60,255:26,0 chr1 222705354 . G . PASS END=222705356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 222705357 . C . PASS END=222705358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 222705359 . G . PASS END=222705365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 222705366 . G . PASS END=222705366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:32,0 chr1 222705367 . A . PASS END=222705385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:32,0 chr1 222705386 . T . PASS END=222705386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:27,0 chr1 222705387 . G . PASS END=222705399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,86,255:29,0 chr1 222705400 . T . PASS END=222705400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 222705401 . C . PASS END=222705429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 222705430 . T . PASS END=222705453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,969:0,65,255:26,0 chr1 222711990 . C . PASS END=222712116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,100,1320:0,100,255:40,0 chr1 222712315 . T . PASS END=222712316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 222712317 . A . PASS END=222712325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,116,1643:0,116,255:40,0 chr1 222713352 . C . PASS END=222713352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 222713353 . C . PASS END=222713369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 222713370 . A . PASS END=222713370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:26,0 chr1 222713371 . A . PASS END=222713372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 222713373 . G . PASS END=222713373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 222713374 . T . PASS END=222713374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:24,0 chr1 222713375 . T . PASS END=222713383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 222713384 . T . PASS END=222713386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,923:0,45,255:27,1 chr1 222713387 . C . PASS END=222713400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 222713401 . C . PASS END=222713401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 222713402 . T . PASS END=222713421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1050:0,90,255:31,0 chr1 222713422 . T . PASS END=222713422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 222713423 . C . PASS END=222713425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 222713426 . C . PASS END=222713428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 222713429 . T . PASS END=222713433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 222713434 . A . PASS END=222713434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 222713435 . A . PASS END=222713435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 222713436 . T . PASS END=222713465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,67,255:26,0 chr1 222713466 . C . PASS END=222713480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:23,0 chr1 222713481 . A . PASS END=222713484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:52:23:0,52,784:0,52,255:19,0 chr1 222713485 . C . PASS END=222713492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:21,0 chr1 222713493 . G . PASS END=222713493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 222713494 . G . PASS END=222713502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 222713503 . C G, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=3.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:2,6,0:9,4,0:48:85,0,50,358,393,751:255,0,255:11,0:4.9897e+01,6.6269e-05,5.3000e+01,3.5761e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,3,7:7,4,3,7 chr1 222713504 . G . PASS END=222713506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 222713507 . A . PASS END=222713507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 222713508 . T . PASS END=222713520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr1 222713521 . G . PASS END=222713540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,47,255:19,0 chr1 222713541 . T . PASS END=222713593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,729:0,60,255:25,0 chr1 222713594 . A . PASS END=222713594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 222713595 . A . PASS END=222713595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:23,0 chr1 222713596 . T . PASS END=222713609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:24,0 chr1 222713610 . G . PASS END=222713610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:20,0 chr1 222713611 . G . PASS END=222713617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 222713618 . T . PASS END=222713619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 222713620 . C . PASS END=222713630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr1 222713631 . G C, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.666;ReadPosRankSum=2.961;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,15,0:0.682,0.000:22:3,7,0:4,8,0:45:85,0,44,537,250,787:255,0,205:7,0:5.0000e+01,1.3979e-04,4.6536e+01,4.5000e+02,2.8514e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,9,6:6,1,7,8 chr1 222713632 . T . PASS END=222713640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 222713641 . C . PASS END=222713643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 222713644 . G . PASS END=222713645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 222713646 . T . PASS END=222713646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 222713647 . C . PASS END=222713655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:20,0 chr1 222713656 . C . PASS END=222713656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr1 222713657 . C . PASS END=222713659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 222713660 . A . PASS END=222713660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 222713661 . A . PASS END=222713668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,727:0,60,255:20,0 chr1 222713669 . C . PASS END=222713669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 222713670 . C . PASS END=222713670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 222713671 . C . PASS END=222713676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 222713677 . G . PASS END=222713683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 222715354 . T . PASS END=222715365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 222715366 . T . PASS END=222715368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr1 222715369 . C . PASS END=222715369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 222715370 . C . PASS END=222715372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 222715373 . A . PASS END=222715375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 222715376 . G . PASS END=222715376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr1 222715377 . G . PASS END=222715467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,89,255:40,0 chr1 222715468 . G . PASS END=222715470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 222715471 . G . PASS END=222715471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 222715472 . C . PASS END=222715472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 222715473 . T . PASS END=222715475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 222715476 . T . PASS END=222715476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 222715477 . T . PASS END=222715480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 222715481 . C . PASS END=222715491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,834:0,64,255:26,0 chr1 222715492 . A . PASS END=222715492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:32:27:0,32,865:0,32,255:17,0 chr1 222715493 . T . PASS END=222715493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 222715494 . G . PASS END=222715494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr1 222715495 . A . PASS END=222715497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 222716879 . C . PASS END=222716969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1248:0,81,255:40,0 chr1 222716970 . A . PASS END=222716970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1410:0,76,255:37,0 chr1 222716971 . C . PASS END=222716998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:37:0,87,1305:0,87,255:40,0 chr1 222716999 . T . PASS END=222716999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:32,0 chr1 222717000 . G . PASS END=222717001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr1 222717002 . C . PASS END=222717002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:30,0 chr1 222717003 . G . PASS END=222717008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1257:0,89,255:30,0 chr1 222717009 . T . PASS END=222717009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:30,0 chr1 222717010 . G . PASS END=222717029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1172:0,89,255:31,0 chr1 222717030 . A . PASS END=222717037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr1 222717038 . C . PASS END=222717038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 222717039 . T . PASS END=222717085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,870:0,61,255:26,0 chr1 222717086 . A . PASS END=222717086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:22,0 chr1 222717087 . G . PASS END=222717105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:23,0 chr1 222717106 . A . PASS END=222717106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 222717107 . C . PASS END=222717117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 222717118 . G . PASS END=222717118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 222717119 . A . PASS END=222717120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 222717121 . G . PASS END=222717128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr1 222717129 . A . PASS END=222717129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 222717130 . C . PASS END=222717133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 222717134 . A . PASS END=222717163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:22,0 chr1 222717164 . T . PASS END=222717164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 222717165 . G . PASS END=222717167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 222717168 . T . PASS END=222717168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 222717169 . G . PASS END=222717171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 222717172 . G . PASS END=222717174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,836:0,53,255:19,0 chr1 222717175 . C . PASS END=222717200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,861:0,66,255:23,0 chr1 222717201 . T . PASS END=222717201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 222717202 . C . PASS END=222717214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 222717215 . G . PASS END=222717215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 222717216 . C . PASS END=222717218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 222717219 . C . PASS END=222717223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 222717224 . C . PASS END=222717241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 222717242 . C . PASS END=222717243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 222717244 . G . PASS END=222717249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 222717250 . A . PASS END=222717250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 222717251 . G . PASS END=222717298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 222717299 . A . PASS END=222717302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 222717303 . C . PASS END=222717307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 222717308 . G . PASS END=222717312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 222717313 . G . PASS END=222717313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 222717314 . C . PASS END=222717315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 222717316 . A . PASS END=222717316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 222717317 . T . PASS END=222717333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr1 222717334 . G . PASS END=222717358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:26,0 chr1 222717359 . C . PASS END=222717361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 222717362 . T . PASS END=222717363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,992:0,65,255:27,0 chr1 222717364 . C . PASS END=222717370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 222717371 . T . PASS END=222717371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 222717372 . G . PASS END=222717374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 222717375 . A . PASS END=222717375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:27,0 chr1 222717376 . C . PASS END=222717508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:33:0,90,1317:0,95,255:40,0 chr1 222717509 . T . PASS END=222717518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,83,255:23,0 chr1 222717519 . A . PASS END=222717531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:19,0 chr1 222721066 . C . PASS END=222721066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 222721067 . T . PASS END=222721067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 222721068 . G . PASS END=222721068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 222721069 . G . PASS END=222721074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr1 222721075 . G . PASS END=222721075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 222721076 . A . PASS END=222721079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:29,0 chr1 222721080 . C . PASS END=222721080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 222721081 . T . PASS END=222721081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 222721082 . T . PASS END=222721083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:27,0 chr1 222721084 . A . PASS END=222721088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 222721089 . A . PASS END=222721089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:28,0 chr1 222721090 . A . PASS END=222721149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1166:0,83,255:39,0 chr1 222721150 . A . PASS END=222721150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:29,0 chr1 222721151 . G . PASS END=222721158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:31,0 chr1 222721159 . G . PASS END=222721159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:30,0 chr1 222721160 . C . PASS END=222721189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1172:0,83,255:31,0 chr1 222721190 . G . PASS END=222721204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,77,255:26,0 chr1 222721205 . C . PASS END=222721205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 222721206 . A . PASS END=222721208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 222721209 . A . PASS END=222721212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 222721213 . A . PASS END=222721221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,74,255:26,0 chr1 222721222 . A . PASS END=222721231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:29,0 chr1 222721232 . A . PASS END=222721232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:27,0 chr1 222721233 . A . PASS END=222721243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 222721244 . T . PASS END=222721244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 222721245 . A . PASS END=222721249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 222721250 . A . PASS END=222721250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 222721251 . G . PASS END=222721251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 222721252 . G . PASS END=222721261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:31,0 chr1 222721262 . T . PASS END=222721262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:28,0 chr1 222721263 . G . PASS END=222721272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 222721273 . C . PASS END=222721283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:26,0 chr1 222721284 . G . PASS END=222721285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 222721286 . C . PASS END=222721286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 222721287 . C . PASS END=222721287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 222721288 . C T, 49.89 PASS DP=30;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=2.422;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:11,5,0:4,9,0:48:85,0,50,435,505,940:255,0,255:14,0:4.9894e+01,6.6269e-05,5.3000e+01,4.3511e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,7,7:7,8,6,8 chr1 222721289 . A . PASS END=222721293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 222721294 . G . PASS END=222721294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 222721295 . A . PASS END=222721297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 222721298 . A . PASS END=222721298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 222721299 . T . PASS END=222721325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1105:0,80,255:32,0 chr1 222721326 . A . PASS END=222721352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 222721353 . C . PASS END=222721353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:28,0 chr1 222721354 . A . PASS END=222721359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 222721360 . C . PASS END=222721368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,74,255:23,0 chr1 222721369 . A . PASS END=222721374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,68,255:19,0 chr1 222721375 . C . PASS END=222721375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:18,0 chr1 222721376 . G . PASS END=222721386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,705:0,57,255:19,0 chr1 222732002 . T . PASS END=222732114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:76:0,120,1800:0,212,255:40,0 chr1 222734706 . C . PASS END=222734860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:38:0,91,1380:0,91,255:40,0 chr1 222736515 . C . PASS END=222736638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,4:91:99:76:0,120,1800:0,196,255:40,0 chr1 222737401 . C . PASS END=222737443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:93:0,120,1800:0,255,255:40,0 chr1 222737444 . A . PASS END=222737467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:84:0,120,1800:0,235,255:40,0 chr1 222742725 . T . PASS END=222742766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,156,255:40,0 chr1 222742852 . C . PASS END=222743010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:40:0,99,1530:0,99,255:40,0 chr1 222743877 . T . PASS END=222744007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:34:0,99,1485:0,102,255:40,0 chr1 222750787 . C . PASS END=222750974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:84:39:0,84,1305:0,84,255:40,0 chr1 222750975 . T . PASS END=222750975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:29,0 chr1 222750976 . G . PASS END=222750980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,95,255:28,0 chr1 222750981 . G . PASS END=222750981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,92,255:25,0 chr1 222750982 . A . PASS END=222750985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1215:0,82,255:28,0 chr1 222753101 . C . PASS END=222753214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,181,255:40,0 chr1 222757470 . C . PASS END=222757472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:26,0 chr1 222757473 . A . PASS END=222757490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:30,0 chr1 222757491 . G . PASS END=222757491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 222757492 . T . PASS END=222757519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1086:0,90,255:40,0 chr1 222757520 . A . PASS END=222757520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:37,0 chr1 222757521 . A . PASS END=222757617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:33:0,82,1229:0,82,255:40,0 chr1 222757618 . T . PASS END=222757618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr1 222757619 . T . PASS END=222757633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1194:0,83,255:29,0 chr1 222757634 . C . PASS END=222757639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:26,0 chr1 222761785 . C . PASS END=222761905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:38:0,101,1413:0,101,255:40,0 chr1 222791204 . A . PASS END=222791234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:8,0 chr1 222791235 . G . PASS END=222791287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 222791288 . C . LowDepth;LowGQ END=222791354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr1 222791355 . G . LowGQ END=222791380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 222791381 . C . PASS END=222791406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr1 222791407 . C . PASS END=222791411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 222791412 . C . PASS END=222791412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 222791413 . C . PASS END=222791433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:11,0 chr1 222791434 . T . PASS END=222791434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 222791435 . C . PASS END=222791440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 222791441 . G . PASS END=222791441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 222791442 . G . PASS END=222791443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 222791444 . G . PASS END=222791453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 222791454 . T . PASS END=222791454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 222791455 . G . PASS END=222791471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr1 222791472 . T . PASS END=222791475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 222791476 . C . PASS END=222791484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 222791485 . G . PASS END=222791485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 222791486 . C . PASS END=222791496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 222791497 . G . PASS END=222791498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 222791499 . T . PASS END=222791507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr1 222791508 . G . PASS END=222791508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 222791509 . G . PASS END=222791509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:13,0 chr1 222791510 . G . PASS END=222791512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 222791513 . C . PASS END=222791516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 222791517 . G . PASS END=222791560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:13,0 chr1 222791561 . C . PASS END=222791561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 222791562 . T . PASS END=222791585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 222794501 . T . PASS END=222794634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,114,1710:0,127,255:40,0 chr1 222798110 . G . PASS END=222798143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,147,255:40,0 chr1 222798144 . T . PASS END=222798196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:63:0,120,1800:0,159,255:40,0 chr1 222800917 . G . PASS END=222801369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:48:0,86,1435:0,86,255:40,1 chr1 222801370 . G . PASS END=222801370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:69:51:0,69,1370:0,69,255:40,0 chr1 222801371 . A . PASS END=222801451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:46:0,81,1640:0,81,255:40,0 chr1 222801452 . C . PASS END=222801452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1598:0,72,255:40,0 chr1 222801453 . T . PASS END=222801463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,102,1507:0,102,255:40,0 chr1 222801464 . A . PASS END=222801464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1397:0,60,255:37,0 chr1 222801465 . T . PASS END=222801968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:37:0,87,1305:0,90,255:40,0 chr1 222801969 . G . PASS END=222802005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:98:54:0,98,1714:0,98,255:40,0 chr1 222802006 . A G, 208.13 PASS DP=56;MQ=250.00;FractionInformativeReads=0.964 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,26,0:0,28,0:158:246,161,0,1988,161,1988:255,162,0:0,0:2.0813e+02,1.5813e+02,0.0000e+00,4.5000e+02,1.9290e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,26:0,0,22,32 chr1 222802007 . A . PASS END=222802043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,114,1729:0,114,255:40,0 chr1 222802044 . T . PASS END=222802482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:41:0,90,1350:0,107,255:40,0 chr1 222802483 . C . PASS END=222802483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:30,0 chr1 222802484 . C . PASS END=222802535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1207:0,86,255:35,0 chr1 222802536 . A . PASS END=222802536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:32,0 chr1 222802537 . C . PASS END=222802542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1205:0,88,255:34,0 chr1 222802543 . A . PASS END=222802543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:31,0 chr1 222802544 . G . PASS END=222802563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1172:0,85,255:33,0 chr1 222802564 . A . PASS END=222802566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 222802567 . A . PASS END=222803156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:33:0,81,1098:0,81,255:40,0 chr1 222803157 . A . PASS END=222803161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1170:0,75,255:27,0 chr1 222803162 . T . PASS END=222803188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:34,0 chr1 222803189 . C . PASS END=222803189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 222803190 . A . PASS END=222803218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1172:0,83,255:34,0 chr1 222803219 . A . PASS END=222803219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:27,0 chr1 222803220 . C . PASS END=222803220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 222803221 . A . PASS END=222803222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1092:0,60,255:26,0 chr1 222803223 . G . PASS END=222803224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 222803225 . G . PASS END=222803232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,984:0,68,255:26,0 chr1 222803233 . A . PASS END=222803233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr1 222803234 . G . PASS END=222803234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 222803235 . C . PASS END=222803235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,945:0,50,255:24,0 chr1 222803236 . C . PASS END=222803237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,969:0,65,255:25,0 chr1 222803238 . G . PASS END=222803238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 222803239 . G . PASS END=222803248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,970:0,67,255:26,0 chr1 222803249 . C . PASS END=222803251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 222803252 . C . PASS END=222803255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 222803256 . A . PASS END=222803259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 222803260 . G . PASS END=222803260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 222803261 . A . PASS END=222803264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 222803265 . T . PASS END=222803265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 222803266 . G . PASS END=222803266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 222803267 . A . PASS END=222803267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 222803268 . C . PASS END=222803281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:29:0,85,1086:0,85,255:34,0 chr1 222803282 . C . PASS END=222803282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr1 222803283 . T . PASS END=222803731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1261:0,81,255:40,0 chr1 222805507 . A . PASS END=222805642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:89:35:0,89,1257:0,89,255:40,0 chr1 222805643 . A . PASS END=222805643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:29,0 chr1 222805644 . A . PASS END=222805644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 222805645 . A . PASS END=222805645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1225:0,74,255:30,0 chr1 222805646 . T . PASS END=222805646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1157:0,36,255:27,0 chr1 222805647 . A . PASS END=222805648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,89,255:29,0 chr1 222805649 . T . PASS END=222805649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 222805650 . G . PASS END=222805654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 222805655 . A . PASS END=222805663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 222805664 . C . PASS END=222805668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 222806446 . G . PASS END=222806450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr1 222806451 . G . PASS END=222806466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,754:0,60,255:25,0 chr1 222806467 . C . PASS END=222806471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1124:0,87,255:33,0 chr1 222806472 . A . PASS END=222806472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr1 222806473 . T . PASS END=222806591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:33:0,82,1034:0,82,255:40,0 chr1 222817818 . A . PASS END=222817819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 222817820 . G . PASS END=222817821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 222817822 . A . PASS END=222817926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1180:0,85,255:40,0 chr1 222817927 . A . PASS END=222817927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:30,0 chr1 222817928 . G . PASS END=222817928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 222818896 . C . PASS END=222819027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:37:0,102,1321:0,104,255:40,0 chr1 222822171 . G . PASS END=222822192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:79:0,120,1800:0,200,255:40,0 chr1 222823634 . T . PASS END=222823693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:78:0,120,1800:0,191,255:40,0 chr1 222823694 . T . PASS END=222823722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:71:0,117,1755:0,199,255:40,0 chr1 222823976 . A . PASS END=222824053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,189,255:40,0 chr1 222824135 . G . PASS END=222824245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,100,1495:0,100,255:40,0 chr1 222825319 . A . PASS END=222825364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:74:0,120,1800:0,172,255:40,0 chr1 222825365 . C . PASS END=222825390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:75:0,120,1800:0,202,255:40,0 chr1 222825570 . G . PASS END=222825674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,176,255:40,0 chr1 222826350 . T . PASS END=222826472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,152,255:40,0 chr1 222826570 . G . PASS END=222826681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,164,255:40,0 chr1 222827585 . G . PASS END=222827640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,135,255:40,0 chr1 222827731 . A . PASS END=222827821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:42:0,87,1395:0,87,255:40,0 chr1 222827997 . A . PASS END=222828135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:48:0,99,1376:0,99,255:40,0 chr1 222831264 . A . PASS END=222831269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:95:0,120,1800:0,255,255:40,0 chr1 222831270 . T . PASS END=222831318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:91:0,120,1800:0,238,255:40,0 chr1 222832064 . G . PASS END=222832165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,105,1493:0,105,255:40,0 chr1 222832795 . G . PASS END=222832855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:71:0,120,1800:0,158,255:40,0 chr1 222832964 . A . PASS END=222832999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:74:0,120,1800:0,195,255:40,0 chr1 222833076 . C . PASS END=222833143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,133,255:40,0 chr1 222833248 . A . PASS END=222833348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:60:0,120,1800:0,166,255:40,0 chr1 222833519 . G . PASS END=222833519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 222833520 . T . PASS END=222833535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:31,0 chr1 222833536 . G . PASS END=222833536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 222833537 . G . PASS END=222833563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,880:0,83,255:37,0 chr1 222833564 . G . PASS END=222833600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,102,1375:0,104,255:40,0 chr1 222833601 . T C, 162.99 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,20,0:0,19,0:113:201,116,0,1406,116,1406:255,117,0:0,0:1.6299e+02,1.1299e+02,0.0000e+00,4.5000e+02,1.4776e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,22:0,0,22,17 chr1 222833602 . G . PASS END=222833630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:35,0 chr1 222833631 . A . PASS END=222833638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 222833639 . T . PASS END=222833651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 222833652 . A . PASS END=222833652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 222833653 . T . PASS END=222833655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 222833656 . G . PASS END=222833656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 222835398 . G . PASS END=222835466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:36:0,107,1321:0,107,255:40,0 chr1 222835595 . A . PASS END=222835674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,108,1629:0,108,255:40,0 chr1 222835800 . C . PASS END=222835871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,134,255:40,0 chr1 222837340 . G . PASS END=222837357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:19,0 chr1 222837358 . G . PASS END=222837369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:23,0 chr1 222837370 . T . PASS END=222837370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 222837371 . T . PASS END=222837377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 222837378 . A . PASS END=222837378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 222837379 . G . PASS END=222837381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:24,0 chr1 222837382 . C . PASS END=222837382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 222837383 . C . PASS END=222837383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 222837384 . T . PASS END=222837384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,787:0,44,255:23,0 chr1 222837385 . C . PASS END=222837388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 222837389 . T . PASS END=222837389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr1 222837390 . G . PASS END=222837405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1072:0,86,255:36,0 chr1 222837406 . G . PASS END=222837406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr1 222837407 . G . PASS END=222837481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:36:0,84,1260:0,106,255:40,0 chr1 222837482 . C . PASS END=222837490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,77,255:26,0 chr1 222838651 . G . PASS END=222838651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 222838652 . C . PASS END=222838652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 222838653 . C . PASS END=222838661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr1 222838662 . C . PASS END=222838671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:26,0 chr1 222838672 . T . PASS END=222838672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,880:0,42,255:26,0 chr1 222838673 . A . PASS END=222838683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,865:0,65,255:26,0 chr1 222838684 . A . PASS END=222838684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,860:0,51,255:26,0 chr1 222838685 . A . PASS END=222838687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1005:0,84,255:29,0 chr1 222838688 . T . PASS END=222838688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 222838689 . G . PASS END=222838953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:29:0,80,1049:0,80,255:40,0 chr1 222838954 . G . PASS END=222838954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1010:0,79,255:29,0 chr1 222838955 . C . PASS END=222838962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1188:0,85,255:32,0 chr1 222838963 . A . PASS END=222838963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:30,0 chr1 222838964 . C . PASS END=222838969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1125:0,82,255:31,0 chr1 222843235 . T . PASS END=222843331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:63:0,114,1800:0,114,255:40,0 chr1 222843475 . A . PASS END=222843592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:55:0,120,1800:0,160,255:40,2 chr1 222846655 . C . PASS END=222846769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:42:0,102,1530:0,118,255:40,0 chr1 222846770 . A . PASS END=222846770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:33,0 chr1 222846771 . T . PASS END=222846777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:37:0,93,1343:0,94,255:33,0 chr1 222849438 . C . PASS END=222849449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,825:0,61,255:26,0 chr1 222849450 . C . PASS END=222849557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:29:0,83,1080:0,83,255:40,0 chr1 222849558 . T . PASS END=222849558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 222849559 . A . PASS END=222849560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 222860272 . C . PASS END=222860277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,125,255:40,0 chr1 222860278 . C . PASS END=222860317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:51:0,90,1651:0,90,255:40,0 chr1 222860318 . A . PASS END=222860318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,8:58:26:58:0,26,1442:0,26,255:40,0 chr1 222860319 . C . LowGQ END=222860319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,12:58:0:58:0,0,1294:40,0,255:37,0 chr1 222860320 . C . PASS END=222860320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:74:58:0,74,1553:0,74,255:40,0 chr1 222860321 . C . LowGQ END=222860321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,10:58:0:58:0,0,1279:73,0,255:36,0 chr1 222860322 . T . PASS END=222860322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 222860323 . C . LowGQ END=222860323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,11:58:0:58:0,0,1333:31,0,255:38,0 chr1 222860324 . T . PASS END=222860325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr1 222860326 . C . LowGQ END=222860326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,10:58:0:58:0,0,1435:51,0,255:40,0 chr1 222860327 . T . PASS END=222860367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:97:44:0,97,1568:0,97,255:40,0 chr1 222860368 . C . PASS END=222860378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:43:0,99,1543:0,99,255:40,0 chr1 222860937 . C . PASS END=222861000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,158,255:40,0 chr1 222867131 . T . PASS END=222867185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:64:0,120,1800:0,192,255:40,0 chr1 222867552 . C . PASS END=222867587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1255:0,86,255:40,0 chr1 222867588 . A . PASS END=222867588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1396:0,76,255:38,0 chr1 222867589 . A . PASS END=222867605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1316:0,107,255:40,0 chr1 222876490 . C . PASS END=222876559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,147,255:40,0 chr1 222885550 . A . PASS END=222885565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:16,0 chr1 222885566 . T . PASS END=222885566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 222885567 . C . PASS END=222885607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:17,0 chr1 222885608 . T . PASS END=222885610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 222885611 . T . PASS END=222885616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 222885617 . T . PASS END=222885617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 222885618 . G . PASS END=222885621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 222885622 . C . PASS END=222885622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 222885623 . C . PASS END=222885627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 222885628 . C . PASS END=222885628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 222885629 . G . PASS END=222885629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 222885630 . C . PASS END=222885630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 222885631 . T . PASS END=222885635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 222885636 . C . PASS END=222885636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 222885637 . A . PASS END=222885642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 222885643 . C . PASS END=222885643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 222885644 . G . PASS END=222885646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 222885647 . T . PASS END=222885647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 222885648 . C . PASS END=222885657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 222885658 . A . PASS END=222885659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr1 222886616 . A . PASS END=222886618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1009:0,87,255:29,0 chr1 222886619 . C . PASS END=222886619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 222886620 . C . PASS END=222886625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:29,0 chr1 222886626 . G . PASS END=222886665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1094:0,90,255:35,0 chr1 222886666 . G . PASS END=222886666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 222886667 . C . PASS END=222886699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1246:0,92,255:36,0 chr1 222886700 . A . PASS END=222886700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:31,0 chr1 222886701 . G . PASS END=222886705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1357:0,95,255:33,0 chr1 222886706 . A . PASS END=222886706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:29,0 chr1 222886707 . G . PASS END=222886718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:31,0 chr1 222886719 . A . PASS END=222886719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:26,0 chr1 222886720 . A . PASS END=222886721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 222886722 . A . PASS END=222886722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:38:29:0,38,951:0,38,255:24,0 chr1 222886723 . G . PASS END=222886728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 222886729 . G . PASS END=222886751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,878:0,64,255:26,0 chr1 222886752 . C . PASS END=222886752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 222886753 . G . PASS END=222886756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 222886757 . A . PASS END=222886757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 222886758 . G . PASS END=222886758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 222886975 . A . PASS END=222886985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1211:0,102,255:35,0 chr1 222886986 . G . PASS END=222886986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:33,0 chr1 222886987 . C . PASS END=222887003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:36:0,82,1319:0,82,255:39,0 chr1 222887004 . C . PASS END=222887004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,0 chr1 222887005 . C . PASS END=222887009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1394:0,101,255:37,0 chr1 222889026 . A . PASS END=222889142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:81:36:0,81,1242:0,81,255:40,0 chr1 222892267 . T . PASS END=222892373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,120,1800:0,138,255:40,0 chr1 222892605 . G . PASS END=222892701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:62:0,120,1800:0,162,255:40,0 chr1 222895761 . T . PASS END=222895856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,109,1800:0,109,255:40,0 chr1 222897434 . T . PASS END=222897506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,218,255:40,0 chr1 222898792 . G . PASS END=222898897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:39:0,81,1427:0,81,255:40,0 chr1 222900510 . T . PASS END=222900584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,101,1410:0,101,255:40,0 chr1 222900585 . T . PASS END=222900585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1140:0,45,255:34,0 chr1 222900586 . C . PASS END=222900586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr1 222900587 . T . PASS END=222900588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1228:0,94,255:35,0 chr1 222900589 . T . PASS END=222900589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1255:0,34,255:34,0 chr1 222900590 . C . PASS END=222900590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 222900591 . A . PASS END=222900591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1244:0,72,255:35,0 chr1 222900592 . A . PASS END=222900597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 222900598 . T . PASS END=222900598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:35,0 chr1 222900599 . G . PASS END=222900599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1199:0,105,255:35,0 chr1 222902085 . A . PASS END=222902170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:56:0,120,1800:0,168,255:40,0 chr1 222902962 . G . PASS END=222903043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:74:0,120,1800:0,209,255:40,0 chr1 222903369 . T . PASS END=222903504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:36:0,84,1206:0,84,255:40,0 chr1 222903505 . A . PASS END=222903505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1226:0,69,255:33,0 chr1 222903506 . G . PASS END=222903506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 222903507 . A . PASS END=222903507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1037:0,74,255:30,0 chr1 222903508 . A . PASS END=222903510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:31,0 chr1 222903511 . T . PASS END=222903511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:29,0 chr1 222903512 . G . PASS END=222903519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:31,0 chr1 222904699 . T . PASS END=222904710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr1 222904711 . A . PASS END=222904711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:27,0 chr1 222904712 . A . PASS END=222904801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1215:0,81,255:40,0 chr1 222904802 . T . PASS END=222904802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:33,0 chr1 222904803 . G . PASS END=222904827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1227:0,102,255:34,0 chr1 222904828 . T . PASS END=222904845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 222904846 . C . PASS END=222904852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,1035:0,63,255:26,0 chr1 222904853 . G . PASS END=222904853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:22,0 chr1 222904854 . A . PASS END=222904854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 222904855 . C . PASS END=222904858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,84,255:17,0 chr1 222905970 . A . PASS END=222906056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:96:45:0,96,1556:0,96,255:40,0 chr1 222910647 . A . PASS END=222910664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:78:0,120,1800:0,204,255:40,0 chr1 222919873 . T . PASS END=222919902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,177,255:40,0 chr1 222919903 . T . PASS END=222920061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:67:0,120,1800:0,165,255:40,0 chr1 222920357 . T . PASS END=222920423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:79:0,120,1800:0,176,255:40,0 chr1 222922303 . T . PASS END=222922306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 222922307 . G . PASS END=222922311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:31,0 chr1 222922312 . T . PASS END=222922312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 222922313 . G . PASS END=222922420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:31:0,83,1135:0,83,255:40,0 chr1 222922421 . T . PASS END=222922421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:27,0 chr1 222922422 . T . PASS END=222922423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 222922424 . A . PASS END=222922424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:27,0 chr1 222922807 . C . PASS END=222922904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,131,255:40,0 chr1 222923263 . A . PASS END=222923313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,131,255:40,0 chr1 222923314 . G . PASS END=222923350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,179,255:40,0 chr1 222923351 . A G, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.586;ReadPosRankSum=3.797;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,34,0:0.567,0.000:60:15,15,0:11,19,0:48:85,0,48,1179,901,2080:255,0,255:23,0:5.0000e+01,7.4552e-05,5.1433e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,20,14,20:15,11,19,15 chr1 222923352 . A . PASS END=222923388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,102,1530:0,120,255:40,0 chr1 222923389 . A . PASS END=222923400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1379:0,95,255:37,0 chr1 222945288 . G . PASS END=222945288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 222945289 . A . PASS END=222945307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1044:0,82,255:34,0 chr1 222945308 . A . PASS END=222945308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr1 222945309 . A . PASS END=222945361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:35:0,88,1235:0,88,255:40,0 chr1 223116166 . A . PASS END=223116168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 223116169 . G . PASS END=223116190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,894:0,62,255:25,0 chr1 223116191 . A . PASS END=223116210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,897:0,80,255:31,0 chr1 223116211 . A . PASS END=223116211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 223116212 . G . PASS END=223116452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:83:32:0,83,1194:0,83,255:40,0 chr1 223116453 . T . PASS END=223116453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1386:0,73,255:31,0 chr1 223116454 . C . PASS END=223116476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1149:0,82,255:34,0 chr1 223116477 . T . PASS END=223116477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:30,0 chr1 223116478 . G . PASS END=223116635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1094:0,83,255:37,0 chr1 223116636 . T . PASS END=223116665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,902:0,64,255:26,0 chr1 223116666 . C . PASS END=223116674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:24:0,51,765:0,55,255:18,0 chr1 223138769 . T . PASS END=223138783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,137,255:40,0 chr1 223156422 . A . PASS END=223156451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:94:0,120,1800:0,255,255:40,0 chr1 223163967 . T . PASS END=223164073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1260:0,96,255:40,0 chr1 223164074 . T . PASS END=223164074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:27,0 chr1 223164075 . C . PASS END=223164083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 223164084 . A . PASS END=223164087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr1 223164088 . C . PASS END=223164088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 223164089 . T . PASS END=223164090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr1 223164862 . G . PASS END=223164989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:57:0,120,1800:0,164,255:40,0 chr1 223165197 . A . PASS END=223165222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,168,255:40,0 chr1 223165223 . T . PASS END=223165230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,207,255:40,0 chr1 223165293 . A . PASS END=223165452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,156,255:40,0 chr1 223168227 . G . PASS END=223168324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:55:0,120,1800:0,122,255:40,0 chr1 223175727 . A . PASS END=223175873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1215:0,89,255:40,0 chr1 223175874 . T . PASS END=223175874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 223175875 . T . PASS END=223175878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 223175879 . G . PASS END=223175895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:26:0,72,1080:0,78,255:26,0 chr1 223175896 . C . PASS END=223175962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1002:0,81,255:34,0 chr1 223175963 . G . PASS END=223175993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr1 223175994 . A . PASS END=223176081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1086:0,80,255:36,0 chr1 223176082 . C . PASS END=223176083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 223176084 . T . PASS END=223176084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 223176085 . T . PASS END=223176085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 223176086 . A . PASS END=223176102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:32,0 chr1 223176103 . T . PASS END=223176104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,923:0,68,255:28,0 chr1 223176105 . T . PASS END=223176105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1000:0,49,255:26,0 chr1 223176106 . C . PASS END=223176112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:29,0 chr1 223176113 . A . PASS END=223176113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1019:0,62,255:27,0 chr1 223176114 . G . PASS END=223176153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1164:0,83,255:32,0 chr1 223176154 . T . PASS END=223176154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:31,0 chr1 223176155 . T . PASS END=223176177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1117:0,82,255:33,0 chr1 223176178 . G . PASS END=223176178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:33,0 chr1 223176179 . C . PASS END=223176189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1264:0,81,255:35,0 chr1 223176190 . T . PASS END=223176190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1303:0,62,255:34,0 chr1 223176191 . C . PASS END=223176191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1465:0,104,255:36,0 chr1 223176192 . A . PASS END=223176192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1274:0,62,255:35,0 chr1 223176193 . C . PASS END=223176237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1120:0,101,255:40,0 chr1 223176238 . T . PASS END=223176274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,120,1800:0,120,255:40,0 chr1 223176275 . G A, 49.87 PASS DP=53;MQ=250.00;MQRankSum=6.172;ReadPosRankSum=3.315;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,25,0:0.481,0.000:52:15,12,0:12,13,0:48:85,0,50,886,966,1852:255,0,255:27,0:4.9872e+01,6.6527e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,4,12,13:17,10,11,14 chr1 223176276 . A . PASS END=223176312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,146,255:40,0 chr1 223176313 . T . PASS END=223176764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:35:0,93,1333:0,95,255:40,0 chr1 223176765 . C . PASS END=223176765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr1 223176766 . A . PASS END=223176981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:38:0,90,1350:0,90,255:40,0 chr1 223176982 . A . PASS END=223176982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1416:0,77,255:34,0 chr1 223176983 . G . PASS END=223177029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1169:0,90,255:40,0 chr1 223177030 . A . PASS END=223177030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1343:0,59,255:35,0 chr1 223177031 . T . PASS END=223177102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1270:0,86,255:39,0 chr1 223177103 . A . PASS END=223177116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:29:0,72,1080:0,87,255:26,0 chr1 223177117 . T . PASS END=223177118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 223177119 . T . PASS END=223177119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 223177120 . C . PASS END=223177120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 223177121 . C . PASS END=223177122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 223177123 . C . PASS END=223177125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 223177126 . A . PASS END=223177126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr1 223177127 . A . PASS END=223177127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 223177128 . G . PASS END=223177153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:28:0,70,978:0,70,255:26,0 chr1 223177154 . G . PASS END=223177157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 223177158 . A . PASS END=223177158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 223177159 . A . PASS END=223177160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1017:0,87,255:29,0 chr1 223177161 . G . PASS END=223177161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 223177162 . G . PASS END=223177175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,975:0,87,255:29,0 chr1 223177176 . G . PASS END=223177176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 223177177 . A . PASS END=223177208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1041:0,87,255:29,0 chr1 223177209 . C . PASS END=223177210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 223177211 . G . PASS END=223177215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 223177216 . G . PASS END=223177216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:27,0 chr1 223177217 . G . PASS END=223177222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 223177223 . G . PASS END=223177230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1008:0,68,255:26,0 chr1 223177231 . G . PASS END=223177234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 223177235 . A . PASS END=223177255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 223177256 . C . PASS END=223177256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:24,0 chr1 223177257 . T . PASS END=223177277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 223177278 . G . PASS END=223177288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 223177289 . C . PASS END=223177290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 223177291 . G . PASS END=223177292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 223177293 . T . PASS END=223177295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 223177296 . A . PASS END=223177299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 223177300 . A . PASS END=223177300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 223177301 . G . PASS END=223177314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1111:0,87,255:31,0 chr1 223177315 . G . PASS END=223177315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:27,0 chr1 223177316 . G . PASS END=223177322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:29,0 chr1 223177323 . A . PASS END=223177324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 223177325 . C . PASS END=223177360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1260:0,87,255:40,0 chr1 223177361 . C . PASS END=223177361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1420:0,76,255:37,0 chr1 223177362 . A . PASS END=223177384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:40:0,87,1466:0,87,255:40,0 chr1 223177385 . G . PASS END=223177385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1333:0,51,255:38,0 chr1 223177386 . C . PASS END=223177392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:41:0,98,1459:0,98,255:40,0 chr1 223177393 . T . PASS END=223177393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1349:0,44,255:39,0 chr1 223177394 . T . PASS END=223177565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1244:0,81,255:40,0 chr1 223177566 . T . PASS END=223177566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:30,0 chr1 223177567 . T . PASS END=223177570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:36,0 chr1 223177571 . T . PASS END=223177571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1371:0,70,255:34,0 chr1 223177572 . A . PASS END=223177656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:37:0,93,1344:0,93,255:40,0 chr1 223177657 . T . PASS END=223177657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1364:0,65,255:34,0 chr1 223177658 . C . PASS END=223177784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:34:0,89,1279:0,89,255:40,0 chr1 223177785 . A . PASS END=223177785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1173:0,74,255:33,0 chr1 223177786 . T . PASS END=223177837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:36,0 chr1 223177838 . G . PASS END=223177859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:25,0 chr1 223177860 . A . PASS END=223177860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr1 223177861 . C . PASS END=223177902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,848:0,61,255:26,0 chr1 223177903 . A . PASS END=223177903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 223177904 . T . PASS END=223177904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 223177905 . T . PASS END=223177905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 223177906 . A . PASS END=223177906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 223177907 . T . PASS END=223177924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 223177925 . G . PASS END=223177948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:24:0,67,955:0,67,255:25,0 chr1 223177949 . C . PASS END=223177949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:24,0 chr1 223177950 . A . PASS END=223177958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,826:0,75,255:25,0 chr1 223177959 . T . PASS END=223177966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:22:0,51,747:0,52,255:18,0 chr1 223177967 . G . PASS END=223177968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 223177969 . G . PASS END=223177992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,629:0,40,255:19,0 chr1 223177993 . T . PASS END=223178000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 223178001 . C . PASS END=223178002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 223178003 . G . PASS END=223178009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:22,0 chr1 223178010 . T . PASS END=223178011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 223178012 . C . PASS END=223178013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr1 223178014 . T . PASS END=223178014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 223178015 . G . PASS END=223178024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,756:0,66,255:22,0 chr1 223178025 . A . PASS END=223178026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 223178027 . G . PASS END=223178032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,869:0,69,255:23,0 chr1 223178033 . G . PASS END=223178033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 223178034 . C . PASS END=223178059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,856:0,64,255:26,0 chr1 223178060 . G . PASS END=223178060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223178061 . C . PASS END=223178062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 223178063 . G . PASS END=223178067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr1 223178068 . C . PASS END=223178068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 223178069 . C . PASS END=223178069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 223178070 . T . PASS END=223178071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 223178072 . C . PASS END=223178083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 223178084 . C . PASS END=223178084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 223178085 . A . PASS END=223178086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 223178087 . G . PASS END=223178087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr1 223178088 . T . PASS END=223178100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1170:0,83,255:32,0 chr1 223178101 . C . PASS END=223178101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:31,0 chr1 223178102 . T . PASS END=223178119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:32,0 chr1 223178120 . C . PASS END=223178120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 223178121 . C . PASS END=223178146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1125:0,82,255:37,0 chr1 223178147 . A . PASS END=223178147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1333:0,75,255:37,0 chr1 223178148 . C . PASS END=223178440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1181:0,81,255:40,0 chr1 223178441 . T . PASS END=223178477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,141,255:40,0 chr1 223178478 . G A, 42.47 PASS DP=56;MQ=250.00;MQRankSum=6.147;ReadPosRankSum=3.326;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,20,0:0.357,0.000:56:21,10,0:15,10,0:42:77,0,50,649,1280,1929:255,0,255:32,0:4.2468e+01,2.6767e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,12,5,15:21,15,11,9 chr1 223178479 . C . PASS END=223178560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:50:0,120,1800:0,124,255:40,0 chr1 223178561 . A C, 46.74 PASS DP=49;MQ=250.00;MQRankSum=5.889;ReadPosRankSum=1.312;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,20,0:0.408,0.000:49:15,7,0:14,13,0:46:82,0,50,641,1027,1668:255,0,255:26,0:4.6742e+01,1.1364e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,14,8,12:15,14,9,11 chr1 223178562 . G . PASS END=223178598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,102,1530:0,114,255:40,0 chr1 223178599 . G . PASS END=223178658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1218:0,86,255:37,0 chr1 223178659 . A . PASS END=223178659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr1 223178660 . G . PASS END=223178701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1170:0,83,255:34,0 chr1 223178702 . T . PASS END=223178702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr1 223178703 . G . PASS END=223178718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1186:0,83,255:32,0 chr1 223178719 . A . PASS END=223178719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:29,0 chr1 223178720 . C . PASS END=223178754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1349:0,84,255:38,0 chr1 223178755 . A . PASS END=223178755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:35,0 chr1 223178756 . G . PASS END=223178766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1382:0,101,255:37,0 chr1 223178767 . A . PASS END=223178767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1203:0,67,255:34,0 chr1 223178768 . G . PASS END=223179314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:36:0,80,1160:0,80,255:40,0 chr1 223283797 . T . PASS END=223283797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:25,0 chr1 223283798 . T . PASS END=223283798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr1 223283799 . A . PASS END=223283799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 223283800 . G . PASS END=223283801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr1 223283802 . A . PASS END=223283804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:29,0 chr1 223283805 . T . PASS END=223283808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:31,0 chr1 223283809 . T . PASS END=223283809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr1 223283810 . G . PASS END=223283823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1016:0,85,255:33,0 chr1 223283824 . C . PASS END=223283824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 223283825 . G . PASS END=223283872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1249:0,89,255:40,0 chr1 223283873 . T . PASS END=223283909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,102,1398:0,102,255:40,0 chr1 223283910 . A G, 182.43 PASS DP=45;MQ=249.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,18,0:0,27,0:132:220,135,0,1737,135,1737:255,135,0:0,0:1.8243e+02,1.3243e+02,0.0000e+00,4.5000e+02,1.6720e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,29:0,0,27,18 chr1 223283911 . A . PASS END=223283947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,134,255:40,0 chr1 223283948 . A . PASS END=223284234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,99,1485:0,103,255:40,0 chr1 223284235 . T . PASS END=223284235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:74:52:0,74,1354:0,74,255:40,0 chr1 223284236 . T . PASS END=223284490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:46:0,90,1599:0,90,255:40,0 chr1 223284491 . C . PASS END=223284527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,125,255:40,0 chr1 223284528 . A G, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.338;ReadPosRankSum=3.037;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,36,0:0.621,0.000:58:10,19,0:12,17,0:46:85,0,45,1271,758,2030:255,0,255:22,0:5.0000e+01,1.1701e-04,4.7707e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,17,19:7,15,20,16 chr1 223284529 . C . PASS END=223284565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,154,255:40,0 chr1 223284566 . C . PASS END=223284756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:80:37:0,80,1349:0,80,255:40,0 chr1 223284757 . T . PASS END=223284757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1482:0,74,255:40,0 chr1 223284758 . G . PASS END=223285439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:82:36:0,82,1267:0,82,255:40,0 chr1 223285440 . T . PASS END=223285440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1285:0,78,255:35,0 chr1 223285441 . G . PASS END=223285460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:37:0,93,1395:0,98,255:35,0 chr1 223285461 . A . PASS END=223285461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:31,0 chr1 223285462 . G . PASS END=223285463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 223285464 . T . PASS END=223285464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:30,0 chr1 223285465 . C . PASS END=223285559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:33:0,85,1293:0,85,255:40,0 chr1 223285560 . G . PASS END=223285560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr1 223285561 . G . PASS END=223285998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:35:0,89,1260:0,89,255:40,0 chr1 223285999 . T . PASS END=223285999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1424:0,79,255:39,0 chr1 223286000 . C . PASS END=223286364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1215:0,84,255:40,0 chr1 223286365 . G . PASS END=223286366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 223286367 . C . PASS END=223286373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:48:28:0,48,720:0,68,255:18,0 chr1 223394382 . T . PASS END=223394422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,130,255:40,0 chr1 223395534 . T . PASS END=223395562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,146,255:40,0 chr1 223396591 . C . PASS END=223396611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,659:0,51,255:19,0 chr1 223396612 . G . PASS END=223396629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 223396630 . C . PASS END=223396634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 223396635 . G . PASS END=223396636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 223396637 . C . PASS END=223396643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 223396644 . G . PASS END=223396648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 223396649 . T . PASS END=223396649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr1 223396650 . A . PASS END=223396660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:26,0 chr1 223396661 . G . PASS END=223396679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:29,0 chr1 223396680 . C . PASS END=223396695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:25:0,71,909:0,71,255:26,0 chr1 223396696 . G . PASS END=223396705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 223396706 . C . PASS END=223396712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 223396713 . T . PASS END=223396713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 223396714 . G . PASS END=223396758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,884:0,62,255:26,0 chr1 223396759 . C . PASS END=223396767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223396768 . C . PASS END=223396809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,64,255:26,0 chr1 223396810 . G . PASS END=223396810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 223396811 . G . PASS END=223396820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 223396821 . G . PASS END=223396821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 223396822 . G . PASS END=223396823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 223396824 . A . PASS END=223396825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 223396826 . G . PASS END=223396835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 223396836 . T . PASS END=223396836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 223396837 . G . PASS END=223396841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 223396842 . A . PASS END=223396842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 223396843 . C . PASS END=223396848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,800:0,63,255:22,0 chr1 223396849 . C . PASS END=223396849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr1 223396850 . C . PASS END=223396854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,852:0,69,255:23,0 chr1 223396855 . A . PASS END=223396855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 223396856 . C . PASS END=223396899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,839:0,66,255:24,0 chr1 223396900 . A . PASS END=223396900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 223396901 . G . PASS END=223396914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,922:0,72,255:24,0 chr1 223396915 . C . PASS END=223396915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 223396916 . G . PASS END=223396924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,787:0,69,255:23,0 chr1 223396925 . G . PASS END=223396953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr1 223396954 . T . PASS END=223396973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 223400936 . C . PASS END=223401080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:41:0,87,1258:0,87,255:40,0 chr1 223402539 . C . PASS END=223402550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,933:0,65,255:26,0 chr1 223402551 . A . PASS END=223402551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 223402552 . G . PASS END=223402553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 223402554 . A . PASS END=223402554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 223402555 . G . PASS END=223402562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 223402563 . A . PASS END=223402573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,897:0,81,255:30,0 chr1 223402574 . C . PASS END=223402574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 223402575 . A . PASS END=223402736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:30:0,84,1172:0,85,255:40,0 chr1 223408294 . T . PASS END=223408296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 223408297 . G . PASS END=223408298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 223408299 . A . PASS END=223408301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 223408302 . G . PASS END=223408304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 223408305 . A . PASS END=223408305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 223408306 . T . PASS END=223408415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:30:0,87,1221:0,90,255:40,0 chr1 223408416 . C . PASS END=223408442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr1 223437972 . C . PASS END=223437988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1072:0,87,255:36,0 chr1 223437989 . C . PASS END=223437989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:34,0 chr1 223437990 . G . PASS END=223437990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1337:0,111,255:37,0 chr1 223437991 . G . PASS END=223437991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr1 223437992 . G . PASS END=223438139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:97:39:0,97,1394:0,97,255:40,0 chr1 223438140 . A . PASS END=223438140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1471:0,71,255:33,0 chr1 223438141 . G . PASS END=223438160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1134:0,88,255:34,0 chr1 223441844 . C . PASS END=223442016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:93:38:0,93,1354:0,98,255:40,0 chr1 223442017 . T . PASS END=223442017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1264:0,77,255:31,0 chr1 223465781 . C . PASS END=223465781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 223465782 . T . PASS END=223465783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 223465784 . C . PASS END=223465784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 223465785 . T . PASS END=223465785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 223465786 . T . PASS END=223465791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr1 223465792 . C . PASS END=223465803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:30,0 chr1 223465804 . T . PASS END=223465804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:28,0 chr1 223465805 . C . PASS END=223465935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,93,255:40,0 chr1 223465936 . G . PASS END=223465936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 223465937 . T . PASS END=223465937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 223465938 . C . PASS END=223465957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 223465958 . T . PASS END=223465959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 223465960 . C . PASS END=223465961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 223465962 . G . PASS END=223465973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,63,255:19,0 chr1 223465974 . C . PASS END=223465993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,459:0,39,255:13,0 chr1 223536620 . C . PASS END=223536621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 223536622 . C . PASS END=223536649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:28:0,84,1047:0,84,255:38,0 chr1 223536650 . G . PASS END=223536650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 223536651 . C . PASS END=223536802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,102,1413:0,110,255:40,1 chr1 223537399 . C . PASS END=223537415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 223566818 . A . PASS END=223566826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 223566827 . T . PASS END=223566827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 223566828 . T . PASS END=223566831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 223566832 . C . PASS END=223566832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 223566833 . C . PASS END=223566836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 223566837 . T . PASS END=223566837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 223566838 . C . PASS END=223566844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 223566845 . C . PASS END=223566845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 223566846 . C . PASS END=223566847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 223566848 . C . PASS END=223566848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 223566849 . C . PASS END=223566862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:18,0 chr1 223566863 . T . PASS END=223566863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 223566864 . G . PASS END=223566864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 223566865 . G . PASS END=223566865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 223566866 . G . PASS END=223566869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 223566870 . C . PASS END=223566870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 223566871 . C . PASS END=223566912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,623:0,51,255:19,0 chr1 223566913 . C . PASS END=223566918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,504:0,31,255:13,0 chr1 223566919 . G . PASS END=223566928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 223566929 . G . PASS END=223566938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 223566939 . C . PASS END=223566939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 223566940 . C . PASS END=223566995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,451:0,36,255:13,0 chr1 223566996 . T . PASS END=223567053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,250:0,24,243:9,0 chr1 223567054 . G . PASS END=223567071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,170:0,15,170:6,0 chr1 223567072 . G . PASS END=223567072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,161:0,1,161:5,0 chr1 223567073 . A . PASS END=223567081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 223567082 . G . PASS END=223567088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,231:0,21,231:7,0 chr1 223567089 . G . PASS END=223567100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:6:0,12,180:0,18,210:6,0 chr1 223567101 . G . PASS END=223567116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 223567117 . G . PASS END=223567117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 223567118 . C . PASS END=223567124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 223567125 . G . PASS END=223567131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 223567132 . C . PASS END=223567132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 223567133 . C . PASS END=223567139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 223567140 . A . PASS END=223567140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 223567141 . T . PASS END=223567172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:13,0 chr1 223567173 . C . PASS END=223567187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:19,0 chr1 223567188 . A . PASS END=223567202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr1 223567203 . C . PASS END=223567203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 223567204 . C . PASS END=223567209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr1 223567210 . G . PASS END=223567249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:17:0,42,629:0,47,255:19,0 chr1 223567250 . T . PASS END=223567287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,435:0,36,255:13,0 chr1 223567288 . G . PASS END=223567299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 223567300 . C . PASS END=223567318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 223567319 . G . PASS END=223567319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 223567320 . G . PASS END=223567323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 223567324 . A . PASS END=223567326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,45,255:9,0 chr1 223567327 . C . PASS END=223567362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 223567363 . C . PASS END=223567363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 223567364 . T . PASS END=223567364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 223567365 . G . PASS END=223567365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 223567366 . G . PASS END=223567391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,451:0,36,255:13,0 chr1 223567392 . G . PASS END=223567422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,568:0,45,255:17,0 chr1 223567423 . G . PASS END=223567423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:14,0 chr1 223567424 . C . PASS END=223567441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,623:0,51,255:19,0 chr1 223567442 . G . PASS END=223567451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr1 223567452 . G . PASS END=223567452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 223567453 . A . PASS END=223567456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 223567457 . A . PASS END=223567457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 223567458 . G . PASS END=223567458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,721:0,27,255:21,0 chr1 223567459 . C . PASS END=223567468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr1 223567469 . G . PASS END=223567475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 223567476 . C . PASS END=223567479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 223567480 . A . PASS END=223567480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 223567481 . G . PASS END=223567484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 223567485 . G . PASS END=223567485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 223567486 . C . PASS END=223567494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 223567495 . C . PASS END=223567513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr1 223567514 . A . PASS END=223567514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 223567515 . A . PASS END=223567519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 223567520 . A . PASS END=223567520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr1 223567521 . T . PASS END=223567526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 223567527 . G . PASS END=223567540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 223567541 . G . PASS END=223567550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 223567551 . G . PASS END=223567551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 223567552 . C . PASS END=223567552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 223567553 . A . PASS END=223567553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr1 223567554 . A . PASS END=223567556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 223567557 . T . PASS END=223567557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 223567558 . G . PASS END=223567560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 223567561 . A . PASS END=223567561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 223567562 . G . PASS END=223567565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 223567566 . T . PASS END=223567566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 223567567 . G . PASS END=223567569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 223567570 . G . PASS END=223567570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 223567571 . G . PASS END=223567573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 223567574 . T . PASS END=223567574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr1 223567575 . C . PASS END=223567576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 223567577 . T . PASS END=223567577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr1 223567578 . C . PASS END=223567583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 223567584 . A . PASS END=223567589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 223567590 . A . PASS END=223567590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 223567591 . G . PASS END=223567603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 223567604 . G . PASS END=223567617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr1 223567618 . C . PASS END=223567618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr1 223567619 . A . PASS END=223567619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 223567620 . A . PASS END=223567621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 223567622 . A . PASS END=223567622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:13,0 chr1 223567623 . A . PASS END=223567624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 223567625 . G . PASS END=223567629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 223567630 . G . PASS END=223567630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 223567631 . A . PASS END=223567642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,451:0,36,255:13,0 chr1 223567643 . C . PASS END=223567666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,484:0,42,255:17,0 chr1 223567667 . T . PASS END=223567667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 223567668 . G . PASS END=223567691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,629:0,51,255:19,0 chr1 223567692 . A . PASS END=223567692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 223567693 . G . PASS END=223567733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:19,0 chr1 223567734 . T . PASS END=223567734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 223567735 . G . PASS END=223567735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 223567736 . C . PASS END=223567743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 223567744 . C . PASS END=223567764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,765:0,50,255:18,0 chr1 223567765 . G . PASS END=223567765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 223567766 . G . PASS END=223567787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,592:0,41,255:17,0 chr1 223567788 . G . PASS END=223567794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 223567795 . G . PASS END=223567795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 223567796 . C . PASS END=223567799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr1 223567800 . G . PASS END=223567800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 223567801 . C . PASS END=223567802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 223567803 . G A, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=2.062;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,12,0:0.522,0.000:23:4,8,0:7,4,0:48:85,0,50,429,393,822:255,0,255:11,0:5.0000e+01,6.5751e-05,5.2906e+01,4.2909e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,7,5:8,3,5,7 chr1 223567804 . C . PASS END=223567804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 223567805 . C . PASS END=223567819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr1 223567820 . C . PASS END=223567832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,759:0,50,255:19,0 chr1 223567833 . T . PASS END=223567833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr1 223567834 . G . PASS END=223567840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,690:0,57,255:19,0 chr1 223567841 . G . PASS END=223567842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr1 223567843 . G . PASS END=223567843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,660:0,29,255:18,0 chr1 223567844 . G . PASS END=223567845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 223567846 . A . PASS END=223567846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:18,0 chr1 223567847 . A . PASS END=223567870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 223567871 . G . PASS END=223567871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 223567872 . A . PASS END=223567889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr1 223567890 . A . PASS END=223567890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:16,0 chr1 223567891 . G . PASS END=223567894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 223567895 . A . PASS END=223567895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,505:0,24,255:17,0 chr1 223567896 . A . PASS END=223567904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,674:0,44,255:18,0 chr1 223567905 . A . PASS END=223567905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:16,0 chr1 223567906 . G . PASS END=223567908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:18,0 chr1 223567909 . G . PASS END=223567909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 223567910 . C . PASS END=223567910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 223567911 . G . PASS END=223567911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 223567912 . C . PASS END=223567919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:18,0 chr1 223567920 . C . PASS END=223567921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:24:19:0,24,626:0,24,255:16,0 chr1 223567922 . G . PASS END=223567936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:17:0,44,675:0,44,255:17,0 chr1 223567937 . T . PASS END=223567937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 223567938 . G . PASS END=223567938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 223567939 . C . PASS END=223567939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 223567940 . C . PASS END=223567964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:18,0 chr1 223567965 . A . PASS END=223567965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 223567966 . G . PASS END=223567999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 223568000 . C . PASS END=223568008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 223568009 . C . PASS END=223568009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 223568010 . A . PASS END=223568013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 223568014 . G . PASS END=223568015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 223568016 . G . PASS END=223568029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:22,0 chr1 223568030 . T . PASS END=223568030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 223568031 . G . PASS END=223568041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 223568042 . C . PASS END=223568042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 223568043 . A . PASS END=223568054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr1 223568055 . T . PASS END=223568055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 223568056 . G . PASS END=223568090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 223568091 . G . PASS END=223568091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr1 223568092 . C . PASS END=223568092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 223568093 . T . PASS END=223568103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 223568104 . T . PASS END=223568107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 223568108 . C . PASS END=223568109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 223568110 . G . PASS END=223568113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 223568114 . C . PASS END=223568114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 223568115 . G . PASS END=223568115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:20,0 chr1 223568116 . G . PASS END=223568116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 223568117 . A . PASS END=223568118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 223568119 . G . PASS END=223568120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 223568121 . T . PASS END=223568131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 223568132 . T . PASS END=223568141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 223568142 . A . PASS END=223568181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:25,0 chr1 223568182 . T . PASS END=223568182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 223568183 . T . PASS END=223568188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 223568189 . C . PASS END=223568189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:22,0 chr1 223568190 . G . PASS END=223568195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 223568196 . A . PASS END=223568196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 223568197 . G . PASS END=223568200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:23,0 chr1 223568201 . A . PASS END=223568201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:22,0 chr1 223568202 . T . PASS END=223568204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 223568205 . A . PASS END=223568205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 223568206 . C . PASS END=223568239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,808:0,66,255:24,0 chr1 223568240 . A . PASS END=223568240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 223568241 . G . PASS END=223568248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 223568249 . G . PASS END=223568265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:28,0 chr1 223568266 . G . PASS END=223568266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,857:0,67,255:27,0 chr1 223568267 . C . PASS END=223568270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 223568271 . T . PASS END=223568271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 223568272 . G . PASS END=223568276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 223568277 . A . PASS END=223568321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,873:0,62,255:26,0 chr1 223568322 . G . PASS END=223568322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:23,0 chr1 223568323 . C . PASS END=223568350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,831:0,61,255:26,0 chr1 223568351 . G . PASS END=223568352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 223568353 . G . PASS END=223568353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:20,0 chr1 223568354 . A . PASS END=223568355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 223568356 . G . PASS END=223568356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr1 223568357 . A . PASS END=223568359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 223568360 . C . PASS END=223568360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 223568361 . G . PASS END=223568361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:21,0 chr1 223568362 . A . PASS END=223568362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 223568363 . C . PASS END=223568363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 223568364 . A . PASS END=223568364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:19,0 chr1 223568365 . G . PASS END=223568367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 223568368 . C . PASS END=223568368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 223568369 . A . PASS END=223568370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 223568371 . G . PASS END=223568371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:20,0 chr1 223568372 . A . PASS END=223568372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,787:0,25,255:19,0 chr1 223568373 . G . PASS END=223568376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 223568377 . C . PASS END=223568377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 223568378 . G . PASS END=223568378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 223568379 . T . PASS END=223568379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 223568380 . G . PASS END=223568380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 223568381 . C . PASS END=223568382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 223568383 . C . PASS END=223568386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 223568387 . A . PASS END=223568388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 223568389 . C . PASS END=223568389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 223568390 . A . PASS END=223568394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 223568395 . G . PASS END=223568395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 223568396 . G . PASS END=223568398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr1 223568399 . A . PASS END=223568399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 223568400 . A . PASS END=223568400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 223568401 . G . PASS END=223568401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 223568402 . G . PASS END=223568429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:26,0 chr1 223568430 . T . PASS END=223568430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 223568431 . G . PASS END=223568466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,847:0,61,255:25,0 chr1 223568467 . C . PASS END=223568467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 223568468 . G . PASS END=223568499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,787:0,72,255:26,0 chr1 223568500 . C . PASS END=223568501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 223568502 . A . PASS END=223568502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 223568503 . G . PASS END=223568513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 223568514 . A . PASS END=223568514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 223568515 . G . PASS END=223568516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:27,0 chr1 223568517 . A . PASS END=223568528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,934:0,65,255:26,0 chr1 223568529 . G . PASS END=223568559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1178:0,83,255:33,0 chr1 223568560 . A . PASS END=223568560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 223568561 . A . PASS END=223568603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1050:0,82,255:36,0 chr1 223568604 . A . PASS END=223568604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:34,0 chr1 223568605 . G . PASS END=223568630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,105,1360:0,108,255:40,0 chr1 223568631 . T . PASS END=223568631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:34,0 chr1 223568632 . T . PASS END=223568657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1215:0,90,255:36,0 chr1 223568658 . T . PASS END=223568658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 223568659 . C . PASS END=223568665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr1 223568666 . T . PASS END=223568677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 223568678 . A . PASS END=223568679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 223568680 . G . PASS END=223568686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 223568687 . T . PASS END=223568689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:17,0 chr1 223711371 . T . PASS END=223711389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 223711390 . A . PASS END=223711390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 223711391 . G . PASS END=223711393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 223711394 . T . PASS END=223711394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 223711395 . G . PASS END=223711399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,360:0,36,255:12,0 chr1 223711400 . G . PASS END=223711400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 223711401 . T . PASS END=223711405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 223711406 . G . PASS END=223711406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 223711407 . A . PASS END=223711415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:13,0 chr1 223711416 . C . PASS END=223711416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 223711417 . T . PASS END=223711418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 223711419 . G . PASS END=223711419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 223711420 . C . PASS END=223711426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 223711427 . G . PASS END=223711448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,302:0,23,255:9,0 chr1 223711449 . C . PASS END=223711481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr1 223712763 . C . PASS END=223712767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr1 223712768 . T . PASS END=223712768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr1 223712769 . G . PASS END=223712769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 223712770 . T . PASS END=223712770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 223712771 . C . PASS END=223712775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1024:0,87,255:29,0 chr1 223712776 . T . PASS END=223712776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 223712777 . C . PASS END=223712783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 223712784 . C . PASS END=223712791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 223712792 . T . PASS END=223712805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1123:0,80,255:30,0 chr1 223712806 . G . PASS END=223712820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,925:0,64,255:26,0 chr1 223712821 . T . PASS END=223712821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223712822 . C . PASS END=223712822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,914:0,15,255:25,0 chr1 223712823 . T . PASS END=223712825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223712826 . T . PASS END=223712832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:26,0 chr1 223712833 . T . PASS END=223712833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:22,0 chr1 223712834 . C . PASS END=223712834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 223712839 . T . PASS END=223712839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr1 223712840 . T . PASS END=223712841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:24,0 chr1 223715199 . T . PASS END=223715203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:49:0,87,1305:0,134,255:33,0 chr1 223715204 . C . PASS END=223715205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:50:0,81,1215:0,150,255:28,0 chr1 223715206 . A . PASS END=223715222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:60:43:0,60,900:0,129,255:26,0 chr1 223716470 . C . PASS END=223716528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:35:0,80,1210:0,80,255:40,0 chr1 223717429 . T . PASS END=223717446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:42:0,120,1800:0,125,255:40,0 chr1 223717447 . G . PASS END=223717483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,137,255:40,0 chr1 223717484 . G A, 212.53 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,31,0:0,24,0:163:250,166,0,2133,166,2133:255,166,0:0,0:2.1253e+02,1.6253e+02,0.0000e+00,4.5000e+02,1.9730e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,28:0,0,29,26 chr1 223717485 . A . PASS END=223717517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,112,1492:0,112,255:40,0 chr1 223717518 . T . PASS END=223717518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1441:0,71,255:38,0 chr1 223717519 . G . PASS END=223717521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,117,1755:0,120,255:39,0 chr1 223717522 . G . PASS END=223717545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1133:0,80,255:39,0 chr1 223718134 . C . PASS END=223718140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 223718141 . C . PASS END=223718161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,988:0,81,255:29,0 chr1 223718162 . G . PASS END=223718185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,903:0,78,255:26,0 chr1 223718186 . G . PASS END=223718186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223718187 . T . PASS END=223718187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 223718188 . T . PASS END=223718188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223718189 . A . PASS END=223718190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 223718191 . A . PASS END=223718196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 223718197 . T . PASS END=223718198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 223718199 . T . PASS END=223718207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 223718208 . A . PASS END=223718212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 223718593 . C . PASS END=223718613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,169,255:40,0 chr1 223718614 . C . PASS END=223718650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,154,255:40,0 chr1 223718651 . G A, 49.60 PASS DP=62;MQ=249.98;MQRankSum=6.278;ReadPosRankSum=1.580;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,29,0:0.468,0.000:62:12,16,0:21,13,0:48:84,0,50,1000,1180,2180:255,0,255:31,0:4.9598e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,21,18,11:19,14,19,10 chr1 223718652 . T . PASS END=223718661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,167,255:40,0 chr1 223722681 . A . PASS END=223722689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:72:0,120,1800:0,163,255:40,1 chr1 223722690 . A . PASS END=223722742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:82:0,120,1800:0,194,255:40,0 chr1 223722743 . T . PASS END=223722745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr1 223724323 . T . PASS END=223724380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,140,255:40,0 chr1 223799948 . C . PASS END=223799959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,165,255:40,0 chr1 223803672 . C . PASS END=223803685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr1 223803686 . A . PASS END=223803695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr1 223803696 . A . PASS END=223803696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr1 223803697 . A . PASS END=223803719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:30:0,90,1080:0,90,255:40,0 chr1 223803720 . C . PASS END=223803720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1457:0,76,255:39,0 chr1 223803721 . C . PASS END=223803831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:36:0,85,1316:0,85,255:40,0 chr1 223803832 . T . PASS END=223803842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:32:0,63,945:0,75,255:28,0 chr1 223803843 . C . PASS END=223803847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 223804025 . C . PASS END=223804165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:33:0,81,1215:0,86,255:40,0 chr1 223804166 . G . PASS END=223804176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1039:0,74,255:26,0 chr1 223804177 . T . PASS END=223804183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 223804184 . G . PASS END=223804190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 223805973 . C . PASS END=223805983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,140,255:40,0 chr1 223806995 . C . PASS END=223806995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 223806996 . T . PASS END=223807013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 223807014 . C . PASS END=223807014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 223807015 . C . PASS END=223807028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr1 223807029 . C . PASS END=223807039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 223807040 . G . PASS END=223807041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 223807042 . C . PASS END=223807074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:23,0 chr1 223807075 . T . PASS END=223807075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr1 223807076 . C . PASS END=223807081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr1 223807082 . T . PASS END=223807082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,869:0,34,255:22,0 chr1 223807083 . A . PASS END=223807094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:24,0 chr1 223807095 . C . PASS END=223807110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,637:0,43,255:18,0 chr1 223807111 . A . PASS END=223807111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,490:0,21,255:15,0 chr1 223807112 . T . PASS END=223807114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 223807115 . C . PASS END=223807115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 223807116 . C . PASS END=223807125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 223807126 . A . PASS END=223807126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,421:0,15,255:12,0 chr1 223807127 . A . PASS END=223807155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,491:0,45,255:16,0 chr1 223807894 . C . PASS END=223807968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,129,255:40,0 chr1 223810513 . C . PASS END=223810602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,130,255:40,0 chr1 223813507 . C . PASS END=223813526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,961:0,72,255:26,0 chr1 223813527 . A . PASS END=223813533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1035:0,84,255:30,0 chr1 223813534 . A . PASS END=223813534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 223813535 . T . PASS END=223813586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1094:0,89,255:35,0 chr1 223813587 . A . PASS END=223813587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:28,0 chr1 223813588 . G . PASS END=223813590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:30,0 chr1 223813727 . C . PASS END=223813753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:35:0,98,1327:0,98,255:38,0 chr1 223813754 . A . PASS END=223813754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:33:38:0,33,1080:0,33,255:31,0 chr1 223813755 . C . PASS END=223813755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:48:38:0,48,1117:0,48,255:31,0 chr1 223813756 . T . PASS END=223813860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:36:0,92,1302:0,92,255:40,0 chr1 223814691 . A . PASS END=223814699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1118:0,85,255:39,0 chr1 223814700 . G . PASS END=223814702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:38,0 chr1 223814703 . G . PASS END=223814719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,127,255:40,0 chr1 223814720 . C . PASS END=223814859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:47:0,108,1620:0,136,255:40,0 chr1 223815711 . T . PASS END=223815712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 223815713 . G . PASS END=223815719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 223815720 . G . PASS END=223815720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 223815721 . C . PASS END=223815721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 223815722 . T . PASS END=223815722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 223815723 . T . PASS END=223815844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:82:31:0,82,1156:0,82,255:40,0 chr1 223816364 . C . PASS END=223816384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1234:0,91,255:40,0 chr1 223816385 . A . PASS END=223816457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:40:0,94,1385:0,94,255:40,0 chr1 223816458 . A . PASS END=223816458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:37,0 chr1 223816459 . T . PASS END=223816482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,84,255:39,0 chr1 223830489 . C . PASS END=223830490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 223830491 . A . PASS END=223830491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 223830492 . G . PASS END=223830496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 223830497 . T . PASS END=223830497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 223830498 . T . PASS END=223830502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 223830503 . A . PASS END=223830503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:30,0 chr1 223830504 . G . PASS END=223830520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1196:0,92,255:34,0 chr1 223830521 . T . PASS END=223830521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:31,0 chr1 223830522 . C . PASS END=223830534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 223830535 . T . PASS END=223830535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 223842032 . C . PASS END=223842099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:47:0,116,1800:0,116,255:40,0 chr1 223842100 . T . PASS END=223842100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1574:0,69,255:40,0 chr1 223842101 . C . PASS END=223842101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 223853112 . C . PASS END=223853120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 223853121 . C . PASS END=223853121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 223853122 . T . PASS END=223853123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 223853124 . C . PASS END=223853124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr1 223853125 . C . PASS END=223853125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 223853126 . A . PASS END=223853136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:30,0 chr1 223853137 . T . PASS END=223853137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 223853138 . G . PASS END=223853153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1002:0,80,255:33,0 chr1 223853154 . T . PASS END=223853154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr1 223853155 . G . PASS END=223853159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:33,0 chr1 223853160 . A . PASS END=223853160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:32,0 chr1 223853161 . A . PASS END=223853201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1233:0,86,255:34,0 chr1 223853202 . A . PASS END=223853202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:27,0 chr1 223853203 . G . PASS END=223853223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:29,0 chr1 223853224 . G . PASS END=223853234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:26,0 chr1 223853235 . C . PASS END=223853235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 223853236 . T . PASS END=223853236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 223853237 . G . PASS END=223853237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 223853238 . T . PASS END=223853238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr1 223853239 . T . PASS END=223853315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:31,0 chr1 223853316 . C . PASS END=223853345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,815:0,66,255:26,0 chr1 223853346 . C . PASS END=223853346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 223853347 . A . PASS END=223853348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr1 223900343 . A . PASS END=223900343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 223900344 . T . PASS END=223900370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:12,0 chr1 223900371 . A . PASS END=223900384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 223900385 . G . PASS END=223900389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 223900390 . G . PASS END=223900391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 223900392 . G . PASS END=223900394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 223900395 . T . PASS END=223900399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 223900400 . T . PASS END=223900400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 223900401 . C . PASS END=223900401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 223900402 . C . PASS END=223900402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 223900403 . C . PASS END=223900404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 223900405 . C . PASS END=223900407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 223900408 . C G, 92.15 PASS DP=15;MQ=246.15;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,11,0:0,4,0:42:130,45,0,579,45,579:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,7:0,0,8,7 chr1 223900409 . A . PASS END=223900414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr1 223900415 . A . PASS END=223900415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 223900416 . T . PASS END=223900417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 223900418 . A . PASS END=223900418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 223900419 . A . PASS END=223900419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr1 223900420 . G . PASS END=223900421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 223900422 . A . PASS END=223900445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:18,0 chr1 223900446 . T . PASS END=223900464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 223900465 . G . PASS END=223900465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr1 223900466 . G . PASS END=223900479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 223900480 . C . PASS END=223900482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 223900483 . G . PASS END=223900489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr1 223900490 . T . PASS END=223900496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 223900497 . C . PASS END=223900497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 223900498 . G . PASS END=223900533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,398:0,36,255:13,0 chr1 223900534 . G . PASS END=223900534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 223900535 . C . PASS END=223900537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 223900538 . T . PASS END=223900538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 223900539 . A . PASS END=223900540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 223900541 . T . PASS END=223900551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 223900552 . C . PASS END=223900552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr1 223900553 . C . PASS END=223900556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 223900557 . G . PASS END=223900557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,336:0,22,255:10,0 chr1 223900558 . C . PASS END=223900559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 223900560 . T . PASS END=223900561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 223900562 . G . PASS END=223900562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr1 223900563 . A . PASS END=223900565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 223900566 . G . PASS END=223900566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 223900567 . G . PASS END=223900567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 223900568 . A . PASS END=223900572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,313:0,30,255:10,0 chr1 223900573 . C . PASS END=223900579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 223905464 . G . PASS END=223905484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,113,1596:0,113,255:40,0 chr1 223905485 . T . PASS END=223905485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:65:46:0,65,1272:0,65,255:40,0 chr1 223905486 . T . PASS END=223905494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,124,255:40,0 chr1 223905495 . G . PASS END=223905531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:40:0,93,1395:0,104,255:40,0 chr1 223905532 . G A, 50.00 PASS DP=40;MQ=249.90;MQRankSum=5.335;ReadPosRankSum=2.462;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:10,16,0:7,7,0:47:85,0,48,823,600,1423:255,0,255:12,0:5.0000e+01,7.7659e-05,5.1039e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,8,15:10,7,9,14 chr1 223905533 . G . PASS END=223905533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,120,255:31,0 chr1 223931802 . G . PASS END=223931920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:40:0,88,1535:0,88,255:40,0 chr1 223933008 . T . PASS END=223933041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1125:0,82,255:40,0 chr1 223933042 . T . PASS END=223933078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1635:0,116,255:40,0 chr1 223933079 . C T, 47.36 PASS DP=46;MQ=250.00;MQRankSum=5.711;ReadPosRankSum=4.640;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,19,0:0.413,0.000:46:13,12,0:14,7,0:46:82,0,50,680,948,1628:255,0,255:26,0:4.7360e+01,1.0147e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,9,10:13,14,10,9 chr1 223933080 . T . PASS END=223933116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:35:0,97,1485:0,97,255:40,0 chr1 223933117 . C . PASS END=223933127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:30,0 chr1 223933128 . A . PASS END=223933133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr1 223933134 . T . PASS END=223933139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,75,255:19,0 chr1 223933140 . A . PASS END=223933140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:18,0 chr1 223933141 . A . PASS END=223933141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 223934699 . G . PASS END=223934699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 223934700 . A . PASS END=223934711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,743:0,47,255:19,0 chr1 223934712 . T . PASS END=223934712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 223934713 . A . PASS END=223934713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 223934714 . T . PASS END=223934718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:23,0 chr1 223934719 . C . PASS END=223934719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr1 223934720 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=2.665;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:8,9,0:3,4,0:48:85,0,50,464,393,857:255,0,255:12,0:5.0000e+01,6.7045e-05,5.2641e+01,4.5000e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,8,5:6,5,4,9 chr1 223934721 . C . PASS END=223934723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,937:0,65,255:27,0 chr1 223934724 . T . PASS END=223934725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 223934726 . A . PASS END=223934726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:28,0 chr1 223934727 . G . PASS END=223934728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 223934729 . G . PASS END=223934730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 223934731 . G . PASS END=223934757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1151:0,80,255:34,0 chr1 223934758 . T . PASS END=223934766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1278:0,89,255:33,0 chr1 223934767 . G . PASS END=223934767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:30,0 chr1 223934768 . C . PASS END=223934781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:33,0 chr1 223934782 . A . PASS END=223934782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:30,0 chr1 223934783 . T . PASS END=223934824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1172:0,80,255:32,0 chr1 223934825 . G . PASS END=223934828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 223934829 . G . PASS END=223934829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:25,0 chr1 223934830 . C . PASS END=223934837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 223934838 . A . PASS END=223934839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 223934840 . A . PASS END=223934857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,917:0,64,255:26,0 chr1 223934858 . C . PASS END=223934867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:19,0 chr1 223936741 . A . PASS END=223936824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:31:0,93,1135:0,93,255:40,0 chr1 223938592 . G . PASS END=223938602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:38:0,104,1433:0,104,255:40,0 chr1 223938603 . C . PASS END=223938677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:33:0,90,1350:0,99,255:40,0 chr1 223939699 . C . PASS END=223939773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:34:0,102,1280:0,102,255:40,0 chr1 223940498 . G . PASS END=223940658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1119:0,85,255:40,0 chr1 223943182 . A . PASS END=223943351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:33:0,90,1203:0,95,255:40,0 chr1 223945071 . G . PASS END=223945082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1485:0,111,255:37,0 chr1 223945407 . G . PASS END=223945433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:41:0,93,1385:0,93,255:40,0 chr1 223946972 . T . PASS END=223946985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:24,0 chr1 223946986 . C . PASS END=223946986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:22,0 chr1 223946987 . A . PASS END=223946987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 223946988 . A . PASS END=223946989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 223946990 . A . PASS END=223946990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:26,0 chr1 223946991 . T . PASS END=223947000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,983:0,87,255:29,0 chr1 223947001 . C . PASS END=223947001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 223947002 . A . PASS END=223947003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 223947004 . A . PASS END=223947004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:28,0 chr1 223947005 . A . PASS END=223947019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,944:0,87,255:29,0 chr1 223947020 . A . PASS END=223947028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1045:0,71,255:26,0 chr1 223947029 . A . PASS END=223947029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 223947030 . G . PASS END=223947035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,77,255:26,0 chr1 223947036 . G . PASS END=223947037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 223947038 . T . PASS END=223947038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 223947039 . C . PASS END=223947040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 223947041 . G . PASS END=223947041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr1 223947042 . A . PASS END=223947043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 223947044 . A . PASS END=223947044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 223947045 . C . PASS END=223947047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 223947048 . T . PASS END=223947048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1045:0,63,255:29,0 chr1 223947049 . C . PASS END=223947080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1093:0,80,255:38,0 chr1 223947081 . A G, 50.00 PASS DP=40;MQ=249.25;MQRankSum=4.803;ReadPosRankSum=0.324;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,21,0:0.538,0.000:39:9,7,0:9,14,0:48:85,0,49,743,640,1383:255,0,255:17,0:5.0000e+01,6.7822e-05,5.2495e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,10,11:11,7,12,9 chr1 223947082 . G . PASS END=223947118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:35:0,80,1327:0,80,255:40,0 chr1 223947119 . T . PASS END=223947162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1119:0,80,255:40,0 chr1 223947163 . T . PASS END=223947163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 223947164 . G . PASS END=223947164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 223947165 . A . PASS END=223947165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 223947166 . A . PASS END=223947169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 223947170 . A . PASS END=223947170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:28,0 chr1 223947171 . A . PASS END=223947171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 223947172 . A . PASS END=223947183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:29,0 chr1 223949283 . A . PASS END=223949319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,160,255:40,0 chr1 223949888 . T . PASS END=223949953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,139,255:40,0 chr1 223951852 . G . PASS END=223951878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,163,255:40,0 chr1 223951879 . C . PASS END=223951909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,146,255:40,0 chr1 223954069 . G . PASS END=223954079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,122,255:40,0 chr1 223954080 . A C, 43.93 PASS DP=45;MQ=250.00;MQRankSum=5.405;ReadPosRankSum=-0.108;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,15,0:0.333,0.000:45:14,8,0:16,7,0:43:79,0,47,179,179,179:255,0,255:30,0:4.3933e+01,2.1900e-04,5.0000e+01,1.7870e+02,2.1347e+02,1.8171e+02:0.00,34.77,37.78,34.77,69.54,37.78:20,10,10,5:14,16,9,6 chr1 223954081 . A . PASS END=223954117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,114,1539:0,114,255:40,0 chr1 223954118 . G . PASS END=223954133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,105,1575:0,128,255:40,0 chr1 223957543 . T . PASS END=223957556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:96:45:0,96,1592:0,96,255:40,0 chr1 223957557 . C . PASS END=223957557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1737:0,70,255:40,0 chr1 223957558 . A . PASS END=223957611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:46:0,89,1554:0,89,255:40,0 chr1 223958149 . A . PASS END=223958227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,125,255:40,0 chr1 223959511 . G . PASS END=223959627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:39:0,104,1378:0,104,255:40,0 chr1 223959883 . A . PASS END=223959941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,124,255:40,0 chr1 223962536 . T . PASS END=223962559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,167,255:40,0 chr1 223968555 . T . PASS END=223968596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,171,255:40,0 chr1 223971817 . T . PASS END=223972016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,116,1545:0,116,255:40,0 chr1 223976710 . C . PASS END=223976711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 223976712 . T . PASS END=223976725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,483:0,45,255:18,0 chr1 223976726 . G . PASS END=223976732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:24,0 chr1 223976733 . G . PASS END=223976733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 223976734 . T . PASS END=223976734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 223976735 . G . PASS END=223976742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 223976743 . C . PASS END=223976743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr1 223976744 . C . PASS END=223976799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:31:0,87,1148:0,93,255:40,0 chr1 223976800 . A . PASS END=223976800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:75:42:0,75,1173:0,75,255:39,0 chr1 223976801 . C . PASS END=223976859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:36:0,82,1267:0,82,255:40,0 chr1 223976860 . C . PASS END=223976863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:60:30:0,60,900:0,90,255:26,0 chr1 223976864 . A . PASS END=223976870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:29:0,42,630:0,74,255:17,0 chr1 223976871 . G . PASS END=223976871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,845:0,12,255:11,0 chr1 223976872 . G . PASS END=223976876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:14,0 chr1 223980091 . C . PASS END=223980193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1185:0,80,255:39,0 chr1 223980194 . C . PASS END=223980194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:28,0 chr1 223980195 . T . PASS END=223980199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 223980200 . C . PASS END=223980200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 223980201 . A . PASS END=223980205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 223980206 . G . PASS END=223980206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 223980207 . G . PASS END=223980221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1169:0,80,255:28,0 chr1 223980222 . A . PASS END=223980222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:25,0 chr1 223980223 . A . PASS END=223980224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223981005 . C . PASS END=223981019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:39:0,90,1358:0,90,255:40,0 chr1 223981020 . C . PASS END=223981131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:32:0,81,1215:0,96,255:40,0 chr1 223981132 . G . PASS END=223981142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 223983517 . A . PASS END=223983521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr1 223983522 . G . PASS END=223983522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 223983523 . C . PASS END=223983524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 223983525 . G . PASS END=223983526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 223983527 . G . PASS END=223983531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 223983532 . C . PASS END=223983532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr1 223983533 . T . PASS END=223983533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 223983534 . G . PASS END=223983534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr1 223983535 . C . PASS END=223983536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 223983537 . C . PASS END=223983538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,566:0,37,255:13,0 chr1 223983539 . G . PASS END=223983539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,529:0,7,255:11,0 chr1 223983540 . T . PASS END=223983540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 223983541 . G . PASS END=223983541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,592:0,40,255:13,0 chr1 223983542 . A . PASS END=223983542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:15,0 chr1 223983543 . T . PASS END=223983546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr1 223983547 . A . PASS END=223983547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:15,0 chr1 223983548 . G . PASS END=223983551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr1 223983552 . G . PASS END=223983554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 223983555 . G . PASS END=223983555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 223983556 . C . PASS END=223983556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,676:0,19,255:20,0 chr1 223983557 . A . PASS END=223983557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,685:0,27,255:21,0 chr1 223983558 . T . PASS END=223983560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 223983561 . T . PASS END=223983561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:21,0 chr1 223983562 . C . PASS END=223983563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr1 223983564 . C . PASS END=223983564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 223983565 . C . PASS END=223983565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 223983566 . G . PASS END=223983566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 223983567 . A . PASS END=223983567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr1 223983568 . G . PASS END=223983569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:22,0 chr1 223983570 . C . PASS END=223983570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 223983571 . T . PASS END=223983571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 223983572 . T . PASS END=223983574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,768:0,42,255:24,0 chr1 223983575 . C . PASS END=223983577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,969:0,75,255:25,0 chr1 223983578 . G . PASS END=223983579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 223983580 . C . PASS END=223983584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,873:0,67,255:25,0 chr1 223983585 . C . PASS END=223983585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:23,0 chr1 223983586 . A . PASS END=223983586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,800:0,34,255:21,0 chr1 223983587 . G . PASS END=223983589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:24,0 chr1 223983590 . T . LowGQ END=223983590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,6:25:0:25:0,0,541:25,0,255:17,0 chr1 223983591 . C . PASS END=223983593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 223983594 . C . PASS END=223983594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 223983595 . A . PASS END=223983595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,817:0,51,255:25,0 chr1 223983596 . G . PASS END=223983596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 223983597 . A . PASS END=223983597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,833:0,40,255:25,0 chr1 223983598 . T . LowGQ END=223983598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,5:30:0:30:0,0,691:15,0,255:23,0 chr1 223983599 . G . PASS END=223983600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 223983601 . G . PASS END=223983601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,931:0,35,255:29,0 chr1 223983602 . T . PASS END=223983602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1103:0,85,255:32,0 chr1 223983603 . A . PASS END=223983603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,991:0,68,255:30,0 chr1 223983604 . T . PASS END=223983606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,104,255:33,0 chr1 223983607 . T . PASS END=223983607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1022:0,71,255:31,0 chr1 223983608 . G . PASS END=223983612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:35,0 chr1 223983613 . T . PASS END=223983613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:27:36:0,27,883:0,27,255:29,0 chr1 223983614 . G . PASS END=223983899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1152:0,84,255:40,0 chr1 223983900 . C . PASS END=223983900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1382:0,76,255:38,0 chr1 223983901 . T . PASS END=223984013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:38:0,87,1352:0,87,255:40,0 chr1 223984014 . A . PASS END=223984014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:37,0 chr1 223984015 . A . PASS END=223984034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1350:0,95,255:38,0 chr1 223984035 . T . PASS END=223984035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1239:0,67,255:35,0 chr1 223984036 . T . PASS END=223984117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,81,255:39,0 chr1 223984118 . A . PASS END=223984118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr1 223984119 . A . PASS END=223984162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1202:0,83,255:33,0 chr1 223984163 . T . PASS END=223984194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,854:0,61,255:25,0 chr1 223984195 . A . PASS END=223984195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:19,0 chr1 223984196 . G . PASS END=223984199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 223984200 . C . PASS END=223984224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 223984225 . A . PASS END=223984225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr1 223984226 . T . PASS END=223984226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 223984227 . T . PASS END=223984232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr1 223984233 . A . PASS END=223984233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 223984234 . A . PASS END=223984234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr1 223984235 . A . PASS END=223984235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:19,0 chr1 223984236 . T . PASS END=223984242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:18,0 chr1 223984243 . T . PASS END=223984243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,690:0,11,255:17,0 chr1 223984244 . G . PASS END=223984254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,635:0,40,255:19,0 chr1 223984255 . T . PASS END=223984255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,558:0,24,255:15,0 chr1 223984256 . T . PASS END=223984256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 223984257 . G . PASS END=223984257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 223984258 . A . PASS END=223984269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 223984270 . A . PASS END=223984270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 223984271 . G . PASS END=223984275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 223984276 . T . PASS END=223984276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 223984277 . A . PASS END=223984278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 223984279 . A . PASS END=223984280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:18,0 chr1 223984281 . G . PASS END=223984281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 223984282 . C . PASS END=223984282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,672:0,30,255:18,0 chr1 223984283 . T . PASS END=223984285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 223984286 . C . PASS END=223984286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:12,0 chr1 223984287 . C . PASS END=223984287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 223984288 . A . PASS END=223984292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,44,255:13,0 chr1 223985917 . C . PASS END=223985919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 223985920 . T . PASS END=223985920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 223985921 . T . PASS END=223985954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 223985955 . A . PASS END=223985957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:27,0 chr1 223985958 . G . PASS END=223985959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 223985960 . G . PASS END=223985972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1157:0,93,255:31,0 chr1 223985973 . T . PASS END=223985973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 223985974 . G . PASS END=223985978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr1 223985979 . A . PASS END=223985979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 223985980 . A . PASS END=223985981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 223985982 . T . PASS END=223985982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:28,0 chr1 223985983 . T . PASS END=223986000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 223986001 . G . PASS END=223986003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 223986004 . G . PASS END=223986014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 223986015 . G . PASS END=223986015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 223986016 . A . PASS END=223986019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:32,0 chr1 223986020 . T . PASS END=223986020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:31,0 chr1 223986021 . A . PASS END=223986028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1252:0,95,255:35,0 chr1 223986029 . T . PASS END=223986029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1130:0,66,255:34,0 chr1 223986030 . G . PASS END=223986379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:35:0,81,1183:0,81,255:40,0 chr1 223987601 . C . PASS END=223987605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,955:0,78,255:26,0 chr1 223987606 . C . PASS END=223987606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:24,0 chr1 223987607 . A . PASS END=223987607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 223987608 . T . PASS END=223987609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 223987610 . C . PASS END=223987610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 223987611 . C . PASS END=223987620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:88:31:0,88,1189:0,88,255:34,0 chr1 223987621 . C . PASS END=223987621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:34,0 chr1 223987622 . T . PASS END=223987748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:36:0,90,1268:0,108,255:40,0 chr1 223987749 . A . PASS END=223987749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1075:0,63,255:30,0 chr1 223988402 . C . PASS END=223988512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,101,1313:0,101,255:40,0 chr1 223989818 . C . PASS END=223990012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1006:0,82,255:40,0 chr1 223990013 . C . PASS END=223990046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,848:0,61,255:26,0 chr1 223990433 . T . PASS END=223990597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:38:0,81,1294:0,81,255:40,0 chr1 223990973 . C . PASS END=223990982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:26,0 chr1 223990983 . T . PASS END=223990987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr1 223990988 . G . PASS END=223990991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 223990992 . C . PASS END=223991105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,81,255:40,0 chr1 223991106 . T . PASS END=223991106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr1 223991107 . C . PASS END=223991152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1155:0,86,255:37,0 chr1 223991153 . C . PASS END=223991154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:24,0 chr1 223991876 . C . PASS END=223992050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:36:0,90,1243:0,90,255:40,1 chr1 223994548 . C . PASS END=223994630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,105,1574:0,113,255:40,0 chr1 223994631 . C . PASS END=223994639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:36:0,69,1035:0,108,255:23,0 chr1 223994640 . G . PASS END=223994649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr1 223998133 . A . PASS END=223998215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:67:0,120,1800:0,194,255:40,0 chr1 224001942 . C . PASS END=224002036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1086:0,80,255:36,0 chr1 224002037 . T . PASS END=224002050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:25,0 chr1 224002051 . A . PASS END=224002055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 224008922 . C . PASS END=224009044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,95,255:40,0 chr1 224009045 . T . PASS END=224009045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr1 224009046 . A . PASS END=224009046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1039:0,49,255:21,0 chr1 224009047 . C . PASS END=224009067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:25,0 chr1 224009068 . A . PASS END=224009069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:20,0 chr1 224033356 . C . PASS END=224033382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1000:0,68,255:26,0 chr1 224218406 . T . PASS END=224218406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1233:0,96,255:32,0 chr1 224218407 . T . PASS END=224218407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 224218408 . T . PASS END=224218428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1185:0,80,255:40,0 chr1 224218429 . G A, 32.59 PASS DP=42;MQ=25.52;MQRankSum=1.213;ReadPosRankSum=1.213;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:14,6,0:9,13,0:31:67,0,32,167,167,167:255,0,255:23,0:3.2594e+01,3.7636e-03,3.5004e+01,1.6736e+02,2.0213e+02,1.7037e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,8,8,11:16,7,13,6 chr1 224218430 . G . PASS END=224218466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,99,1450:0,99,255:40,0 chr1 224218467 . A . PASS END=224218498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:40:0,96,1528:0,96,255:40,0 chr1 224222656 . T . PASS END=224222674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:32:0,93,1201:0,93,255:40,0 chr1 224222675 . T . PASS END=224222808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:86:46:0,86,1659:0,86,255:40,0 chr1 224301832 . A . PASS END=224301840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 224301841 . G . PASS END=224301856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 224301857 . T . PASS END=224301858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 224301859 . G . PASS END=224301866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 224301867 . A . PASS END=224301869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224301870 . A . PASS END=224301872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 224301873 . C . PASS END=224301877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224301878 . G . LowGQ END=224301878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:8,0 chr1 224301879 . C . PASS END=224301882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 224301883 . G . PASS END=224301910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr1 224301911 . G . PASS END=224301974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr1 224301975 . C . PASS END=224301975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 224301976 . C . PASS END=224301984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:15,0 chr1 224301985 . G . PASS END=224301985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 224301986 . C . PASS END=224301987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 224301988 . C . PASS END=224301988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 224301989 . T . PASS END=224301989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr1 224301990 . G . PASS END=224302015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 224302016 . A . LowGQ END=224302016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 224302017 . C . PASS END=224302017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 224302018 . A . LowGQ END=224302018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:10,0 chr1 224302019 . C . PASS END=224302020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 224302021 . C . PASS END=224302021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:11,0 chr1 224302022 . T . PASS END=224302029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 224302030 . C . PASS END=224302032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr1 224302033 . C . PASS END=224302044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr1 224302045 . A . LowGQ END=224302045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:9,0 chr1 224302046 . T . PASS END=224302048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 224302049 . A . PASS END=224302049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 224302050 . G . PASS END=224302050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 224302051 . A . PASS END=224302051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 224302052 . A . PASS END=224302058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 224302059 . C . PASS END=224302059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 224302060 . A . PASS END=224302060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 224302061 . G . PASS END=224302061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 224302062 . C . PASS END=224302071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,291:0,30,255:10,0 chr1 224302072 . T . LowGQ END=224302072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:9,0 chr1 224302073 . A . PASS END=224302073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 224302074 . C . LowGQ END=224302074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 224302075 . G . PASS END=224302076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 224302077 . C . PASS END=224302079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 224302080 . A . LowGQ END=224302082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:1,0,255:8,0 chr1 224302083 . T . PASS END=224302092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 224302093 . C . PASS END=224302098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:6,0 chr1 224318174 . G . PASS END=224318207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,110,1800:0,110,255:40,0 chr1 224318208 . T . PASS END=224318283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,120,1800:0,129,255:40,0 chr1 224321776 . G . PASS END=224321914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,115,1800:0,115,255:40,0 chr1 224340844 . G . PASS END=224340844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 224340845 . T . PASS END=224340848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 224340849 . T . PASS END=224340849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1001:0,51,255:29,0 chr1 224340850 . G . PASS END=224340855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:33,0 chr1 224340856 . A . PASS END=224340856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr1 224340857 . T . PASS END=224340858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 224340859 . T . PASS END=224340860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:36:0,75,1201:0,75,255:36,0 chr1 224340861 . T . PASS END=224341039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,105,1339:0,105,255:40,0 chr1 224345054 . T . PASS END=224345054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 224345055 . T . PASS END=224345055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:24,0 chr1 224345056 . C . PASS END=224345056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 224345057 . C . PASS END=224345215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1078:0,81,255:40,0 chr1 224345216 . A . PASS END=224345216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:29,0 chr1 224345217 . G . PASS END=224345220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 224345221 . A . PASS END=224345221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:28,0 chr1 224345222 . A . PASS END=224345224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:29,0 chr1 224345225 . A . PASS END=224345225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 224345226 . G . PASS END=224345230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 224345231 . A . PASS END=224345231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 224345232 . A . PASS END=224345235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 224345236 . C . PASS END=224345236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr1 224345237 . A . PASS END=224345242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:28,0 chr1 224345243 . A . PASS END=224345243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 224345244 . G . PASS END=224345246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:29,0 chr1 224345247 . A . PASS END=224345247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr1 224345248 . C . PASS END=224345280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1286:0,81,255:36,0 chr1 224345281 . A . PASS END=224345281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:32,0 chr1 224345282 . A . PASS END=224345360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1091:0,86,255:37,0 chr1 224345361 . G . PASS END=224345361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1441:0,68,255:37,0 chr1 224345362 . A . PASS END=224345435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:33:0,87,1203:0,88,255:40,0 chr1 224345436 . G . PASS END=224345440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 224345441 . G . PASS END=224345441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 224345442 . A . PASS END=224345442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,917:0,35,255:25,0 chr1 224345443 . A . PASS END=224345446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 224345447 . A . PASS END=224345447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:26,0 chr1 224345448 . A . PASS END=224345448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 224363631 . A . PASS END=224363649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,110,1678:0,110,255:40,0 chr1 224371039 . A . PASS END=224371111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,630:0,40,255:19,0 chr1 224371112 . A . PASS END=224371120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 224377279 . C . PASS END=224377279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 224377280 . A . PASS END=224377284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:19,0 chr1 224377285 . A . PASS END=224377287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 224377288 . C . PASS END=224377289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 224377290 . G . PASS END=224377299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,947:0,69,255:26,0 chr1 224377300 . C . PASS END=224377303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 224377304 . G . PASS END=224377304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr1 224377305 . A . PASS END=224377305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 224377306 . T . PASS END=224377308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 224377309 . A . PASS END=224377312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 224377313 . T . PASS END=224377313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 224377314 . G . PASS END=224377321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1141:0,93,255:32,0 chr1 224377322 . T . PASS END=224377322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:31,0 chr1 224377323 . T . PASS END=224377331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1045:0,80,255:37,0 chr1 224377332 . A . PASS END=224377332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:35,0 chr1 224377333 . T . PASS END=224377924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1213:0,81,255:40,0 chr1 224377925 . C . PASS END=224377925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,8:53:26:53:0,26,1267:0,26,255:40,0 chr1 224377926 . T . PASS END=224378021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,113,1494:0,113,255:40,0 chr1 224380034 . G . PASS END=224380034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 224380035 . T . PASS END=224380042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:31,0 chr1 224380043 . A . PASS END=224380043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr1 224380044 . T . PASS END=224380152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,972:0,83,255:40,0 chr1 224380153 . C . PASS END=224380171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,894:0,64,255:26,0 chr1 224380172 . C . PASS END=224380176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 224380177 . G . PASS END=224380180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,44,255:13,0 chr1 224415328 . T . PASS END=224415372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,105,1327:0,105,255:38,0 chr1 224418928 . C . PASS END=224418998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,2:94:99:81:0,120,1800:0,212,255:40,0 chr1 224420643 . T . PASS END=224420674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,223,255:40,0 chr1 224420903 . C . PASS END=224420972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,109,1790:0,109,255:40,0 chr1 224420973 . A . PASS END=224420973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1598:0,64,255:40,0 chr1 224420974 . G . PASS END=224420991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1278:0,89,255:40,0 chr1 224424208 . G . PASS END=224424284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,124,255:40,0 chr1 224437914 . T . PASS END=224437914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 224437915 . T . PASS END=224437915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:28,0 chr1 224437916 . T . PASS END=224437918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 224437919 . T . PASS END=224437919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 224437920 . G . PASS END=224437920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 224437921 . A . PASS END=224437921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,999:0,48,255:28,0 chr1 224437922 . T . PASS END=224437922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 224437923 . A . PASS END=224437923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,889:0,70,255:28,0 chr1 224437924 . G . PASS END=224437924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 224437925 . T . PASS END=224437936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1025:0,76,255:30,0 chr1 224437937 . C . PASS END=224437937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 224437938 . A . PASS END=224437938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 224437939 . A . PASS END=224437941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 224437942 . C . PASS END=224437942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 224437943 . G . PASS END=224437947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1196:0,96,255:32,0 chr1 224437948 . G . PASS END=224437948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 224437949 . C . PASS END=224437950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:32,0 chr1 224437951 . G . PASS END=224437951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:31,0 chr1 224437952 . G . PASS END=224437969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1217:0,86,255:32,0 chr1 224437970 . A . PASS END=224437970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:29,0 chr1 224437971 . C . PASS END=224437971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:29,0 chr1 224437972 . A . PASS END=224437972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 224437973 . G . PASS END=224437989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr1 224437990 . C . PASS END=224438011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,900:0,63,255:26,0 chr1 224438012 . C . PASS END=224438020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:17,0 chr1 224454921 . T . PASS END=224454925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 224455736 . C . PASS END=224455821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:38:0,84,1260:0,113,255:40,0 chr1 224455822 . A . PASS END=224455824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,91,255:26,0 chr1 224455825 . C . PASS END=224455832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:29,0 chr1 224455833 . T . PASS END=224455833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 224455834 . G . PASS END=224455835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 224461198 . T . PASS END=224461203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,155,255:40,0 chr1 224463041 . C . PASS END=224463160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,120,1800:0,135,255:40,0 chr1 224468825 . C . PASS END=224468887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:78:0,120,1800:0,217,255:40,0 chr1 224473728 . C . PASS END=224473832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:36:0,93,1395:0,108,255:40,0 chr1 224475477 . C . PASS END=224475483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,876:0,61,255:25,0 chr1 224475484 . G . PASS END=224475565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:27:0,81,994:0,81,255:39,0 chr1 224475566 . T . PASS END=224475566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:33,0 chr1 224475567 . T . PASS END=224475602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1127:0,84,255:35,0 chr1 224475603 . G . PASS END=224475603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 224475604 . A . PASS END=224475607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 224475608 . C . PASS END=224475608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 224475609 . A . PASS END=224475611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 224475612 . C . PASS END=224475613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1070:0,76,255:27,0 chr1 224475614 . G . PASS END=224475677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:36,0 chr1 224475678 . C . PASS END=224475695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:25,0 chr1 224477186 . C . PASS END=224477187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 224477188 . G . PASS END=224477188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 224477189 . T . PASS END=224477189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 224477190 . G . PASS END=224477207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr1 224477208 . G . PASS END=224477346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,986:0,81,255:38,0 chr1 224477347 . C . PASS END=224477367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 224477368 . G . PASS END=224477384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,681:0,41,255:19,0 chr1 224477385 . A . PASS END=224477385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:19,0 chr1 224477386 . A . PASS END=224477388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 224477389 . C . PASS END=224477389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:18,0 chr1 224477390 . A . PASS END=224477390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 224477391 . A . PASS END=224477407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr1 224477408 . C . PASS END=224477408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 224477409 . A . PASS END=224477428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 224477429 . A . PASS END=224477435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 224481969 . C . PASS END=224481969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:20,0 chr1 224481970 . T . PASS END=224481974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr1 224481975 . C . PASS END=224481976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 224481977 . G . PASS END=224481989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,878:0,75,255:26,0 chr1 224481990 . G . PASS END=224482007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:32,0 chr1 224482008 . T . PASS END=224482008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 224482009 . C . PASS END=224482062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:32:0,90,1275:0,96,255:39,0 chr1 224482063 . T . PASS END=224482063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr1 224482064 . A . PASS END=224482075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1163:0,80,255:32,0 chr1 224482076 . A . PASS END=224482076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1023:0,63,255:26,0 chr1 224482077 . A . PASS END=224482084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 224482085 . C . PASS END=224482097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:25,0 chr1 224482098 . G . PASS END=224482099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:19,0 chr1 224482100 . C . PASS END=224482100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 224482101 . A . PASS END=224482113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:21:0,51,765:0,59,255:19,0 chr1 224484203 . C . PASS END=224484320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,112,1545:0,112,255:40,0 chr1 224488264 . C . PASS END=224488342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:32:0,85,1233:0,85,255:39,0 chr1 224488343 . T . PASS END=224488343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1311:0,75,255:37,0 chr1 224488344 . T . PASS END=224488362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,81,255:38,0 chr1 224488363 . T . PASS END=224488365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:26,0 chr1 224491425 . C . PASS END=224491488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1192:0,89,255:36,0 chr1 224491489 . C . PASS END=224491489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:31,0 chr1 224491490 . G . PASS END=224491506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1172:0,93,255:31,0 chr1 224491507 . A . PASS END=224491507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 224491508 . G . PASS END=224491509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 224491510 . T . PASS END=224491528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:24,0 chr1 224491529 . G . PASS END=224491532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,738:0,30,255:20,0 chr1 224491533 . C . PASS END=224491533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 224491534 . A . PASS END=224491541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:18,0 chr1 224491542 . G . PASS END=224491544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 224491545 . C . PASS END=224491553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 224491554 . G . PASS END=224491559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 224492437 . C . PASS END=224492514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,152,255:40,0 chr1 224492736 . C . PASS END=224492745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,111,1685:0,111,255:40,0 chr1 224492746 . C T, 218.09 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,28,0:0,29,0:168:256,171,0,2163,171,2163:255,174,0:0,0:2.1809e+02,1.6809e+02,0.0000e+00,4.5000e+02,2.0286e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,27:0,0,35,22 chr1 224492747 . A . PASS END=224492783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,156,255:40,0 chr1 224492784 . C . PASS END=224492868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:42:0,99,1485:0,126,255:40,0 chr1 224495693 . C . PASS END=224495702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,937:0,64,255:26,0 chr1 224495703 . G . PASS END=224495814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:27:0,81,948:0,81,255:40,0 chr1 224495815 . G . PASS END=224495851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,111,1778:0,111,255:40,0 chr1 224495852 . C T, 184.97 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,25,0:0,21,0:135:223,138,0,1722,138,1722:255,138,0:0,0:1.8497e+02,1.3497e+02,0.0000e+00,4.5000e+02,1.6974e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,23:0,0,24,22 chr1 224495853 . C . PASS END=224495889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,100,1620:0,100,255:40,0 chr1 224495890 . C . PASS END=224495940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,81,255:40,0 chr1 224495941 . G . PASS END=224495965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr1 224499502 . C . PASS END=224499559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,102,1530:0,117,255:40,0 chr1 224505396 . T . PASS END=224505495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:64:0,120,1800:0,157,255:40,0 chr1 224505580 . C . PASS END=224505613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,197,255:40,0 chr1 224505614 . T . PASS END=224505632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:75:0,120,1800:0,187,255:40,0 chr1 224514093 . C . PASS END=224514166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:69:0,120,1800:0,191,255:40,0 chr1 224517773 . C . PASS END=224517804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1149:0,82,255:32,0 chr1 224517805 . C . PASS END=224517829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:33,0 chr1 224544627 . A . PASS END=224544695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,1025:0,84,255:38,0 chr1 224548197 . A . PASS END=224548265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,187,255:40,0 chr1 224553581 . T . PASS END=224553693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:42:0,96,1440:0,122,255:40,0 chr1 224558985 . A . PASS END=224558988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1395:0,96,255:34,0 chr1 224558989 . A . PASS END=224558989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 224558990 . T . PASS END=224559125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:35:0,92,1294:0,92,255:40,0 chr1 224563497 . T . PASS END=224563524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,188,255:40,0 chr1 224566771 . T . PASS END=224566792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,236,255:40,0 chr1 224577537 . T . PASS END=224577537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr1 224577538 . C . PASS END=224577538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:38,0 chr1 224577539 . A . PASS END=224577546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:42:0,87,1266:0,87,255:40,0 chr1 224577547 . A . PASS END=224577547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1382:0,71,255:34,0 chr1 224577548 . T . PASS END=224577555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:41:0,90,1454:0,90,255:36,0 chr1 224577556 . C . PASS END=224577557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:29,0 chr1 224577558 . T . PASS END=224577562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1350:0,92,255:30,0 chr1 224581530 . C . PASS END=224581536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr1 224581537 . A . PASS END=224581545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 224581546 . G . PASS END=224581546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 224581547 . T . PASS END=224581547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,948:0,48,255:27,0 chr1 224581548 . C . PASS END=224581551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 224581552 . A . PASS END=224581552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 224581553 . A . PASS END=224581590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,90,255:34,0 chr1 224581591 . T . PASS END=224581591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr1 224581592 . G . PASS END=224581606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1266:0,102,255:36,0 chr1 224581607 . A . PASS END=224581607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1209:0,53,255:34,0 chr1 224581608 . T . PASS END=224581610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1360:0,108,255:37,0 chr1 224581611 . A . PASS END=224581611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 224581612 . T . PASS END=224581631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1325:0,95,255:37,0 chr1 224581632 . T . PASS END=224581632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:33,0 chr1 224581633 . C . PASS END=224581634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 224581635 . C . PASS END=224581635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:34,0 chr1 224581636 . A . PASS END=224581641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:32,0 chr1 224581642 . T . PASS END=224581642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 224581643 . A . PASS END=224581643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1128:0,53,255:23,0 chr1 224581644 . C . PASS END=224581657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:28:0,66,990:0,84,255:25,0 chr1 224581658 . C . PASS END=224581658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,929:0,29,255:24,2 chr1 224581659 . C . PASS END=224581660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:15:28:0,15,900:0,15,255:25,2 chr1 224581661 . G . PASS END=224581661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr1 224581662 . T . PASS END=224581674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,992:0,65,255:25,0 chr1 224581675 . T . PASS END=224581675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 224581676 . G . PASS END=224581685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr1 224581686 . T . PASS END=224581695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,53,255:19,0 chr1 224581696 . C . PASS END=224581702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,41,255:13,0 chr1 224581703 . T . PASS END=224581704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 224581705 . A . PASS END=224581713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 224581714 . A . PASS END=224581714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 224581715 . T . PASS END=224581715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 224585799 . C . PASS END=224585928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,164,255:40,0 chr1 224586216 . C . PASS END=224586295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:72:0,120,1800:0,161,255:40,0 chr1 224586591 . A . PASS END=224586591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 224586592 . T . PASS END=224586592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr1 224586593 . G . PASS END=224586617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:34:0,90,1350:0,95,255:36,0 chr1 224586618 . T . PASS END=224586618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:33,0 chr1 224586619 . T . PASS END=224586700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,92,255:40,0 chr1 224586701 . C . PASS END=224586721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,64,255:26,0 chr1 224586722 . A . PASS END=224586722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:19,0 chr1 224586723 . T . PASS END=224586723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 224586724 . T . PASS END=224586729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,66,255:17,0 chr1 224586730 . C . PASS END=224586730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 224586731 . T . PASS END=224586731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 224586732 . A . PASS END=224586734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 224586735 . T . PASS END=224586736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 224588652 . A . PASS END=224588771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,149,255:40,0 chr1 224592132 . T . PASS END=224592262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:39:0,87,1388:0,87,255:40,0 chr1 224592263 . G . PASS END=224592272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:31:0,63,945:0,93,255:24,0 chr1 224599128 . C . PASS END=224599249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:93:48:0,93,1395:0,109,255:40,0 chr1 224599250 . T . PASS END=224599252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:78:46:0,78,1170:0,138,255:26,0 chr1 224599253 . C . PASS END=224599253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:47:0,81,1215:0,141,255:27,0 chr1 224599254 . A . PASS END=224599258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr1 224599259 . A . PASS END=224599265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:30,0 chr1 224599266 . T . PASS END=224599267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 224605962 . C . PASS END=224605962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 224605963 . T . PASS END=224605964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:67:28:0,67,955:0,67,255:31,0 chr1 224605965 . C . PASS END=224605965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 224605966 . T . PASS END=224605966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1157:0,72,255:32,0 chr1 224605967 . A . PASS END=224605973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:34,0 chr1 224605974 . T . PASS END=224605974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:33,0 chr1 224605975 . G . PASS END=224606077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1215:0,99,255:40,0 chr1 224606078 . T . PASS END=224606102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:26,0 chr1 224606103 . G . PASS END=224606111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,56,255:17,0 chr1 224606112 . A . PASS END=224606118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:30:19:0,30,450:0,57,255:12,0 chr1 224607220 . T . PASS END=224607310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:45:0,81,1215:0,135,255:40,0 chr1 224607311 . C . PASS END=224607317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:31:0,72,1080:0,93,255:26,0 chr1 224612220 . C . PASS END=224612226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:24,0 chr1 224612227 . G . PASS END=224612421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:29:0,81,1215:0,87,255:40,0 chr1 224619179 . C . PASS END=224619283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:45:0,97,1653:0,97,255:40,0 chr1 224619293 . T . PASS END=224619293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 224619384 . C . PASS END=224619483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,102,1438:0,102,255:40,0 chr1 224621386 . T . PASS END=224621387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr1 224621388 . G . PASS END=224621388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 224621389 . A . PASS END=224621397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,681:0,41,255:19,0 chr1 224621398 . C . PASS END=224621405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 224621406 . G . PASS END=224621431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 224621432 . C . PASS END=224621432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 224621433 . C . PASS END=224621433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr1 224621434 . T . PASS END=224621450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr1 224621451 . C . PASS END=224621452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 224621453 . G . PASS END=224621454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 224621455 . T . PASS END=224621455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 224621456 . T . PASS END=224621475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,677:0,60,255:22,0 chr1 224621476 . C . PASS END=224621476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 224621477 . C . PASS END=224621477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 224621478 . C . PASS END=224621479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 224621480 . G . PASS END=224621490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,893:0,64,255:22,0 chr1 224621491 . G . PASS END=224621491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 224621492 . C . PASS END=224621492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 224621493 . C . PASS END=224621503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,670:0,47,255:19,0 chr1 224621504 . A . PASS END=224621505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 224621506 . G . PASS END=224621506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr1 224621507 . C . PASS END=224621520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 224621521 . G . PASS END=224621521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr1 224621522 . A . PASS END=224621535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,621:0,40,255:17,0 chr1 224621536 . G . PASS END=224621536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 224621537 . T . PASS END=224621618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,607:0,41,255:19,0 chr1 224621619 . G . PASS END=224621634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 224621635 . C . PASS END=224621638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 224621639 . T . PASS END=224621640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 224621641 . G . PASS END=224621643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 224621644 . T . PASS END=224621645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 224621646 . G . PASS END=224621676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 224621677 . G . PASS END=224621678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 224621679 . G . PASS END=224621699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 224621700 . C . PASS END=224621719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:13,0 chr1 224621720 . G . PASS END=224621720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 224621721 . G . PASS END=224621722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 224621723 . T . PASS END=224621726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 224621727 . T . LowGQ END=224621727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:7,0 chr1 224621728 . C . PASS END=224621741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 224621742 . G . PASS END=224621742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr1 224621743 . C . PASS END=224621747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 224621748 . T . PASS END=224621748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 224621749 . C . PASS END=224621756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 224621757 . A . LowGQ END=224621757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:25,0,255:7,0 chr1 224621758 . C . PASS END=224621762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 224621763 . G . PASS END=224621764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 224621765 . C . PASS END=224621772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,1 chr1 224621773 . C . LowGQ END=224621775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,321:0,0,255:9,1 chr1 224621776 . C . PASS END=224621777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621778 . T . PASS END=224621778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 224621779 . C . PASS END=224621780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 224621781 . T . PASS END=224621781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:8,0 chr1 224621782 . C . PASS END=224621782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621783 . C . PASS END=224621783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 224621784 . T . PASS END=224621784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 224621785 . C . PASS END=224621786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621787 . T . PASS END=224621787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 224621788 . C . PASS END=224621788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr1 224621789 . C . PASS END=224621789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621790 . T . LowGQ END=224621791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,278:22,0,255:9,0 chr1 224621792 . C . PASS END=224621792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621793 . C . LowGQ END=224621793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr1 224621794 . C . PASS END=224621795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 224621796 . A . LowGQ END=224621796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,219:23,0,241:8,0 chr1 224621797 . T . PASS END=224621798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr1 224621799 . G . PASS END=224621799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621800 . G . PASS END=224621800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 224621801 . C . PASS END=224621802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621803 . T . PASS END=224621804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:9,0 chr1 224621805 . C . PASS END=224621805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 224621806 . A . PASS END=224621807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 224621808 . G . PASS END=224621808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 224621809 . A . PASS END=224621810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 224621811 . G . PASS END=224621823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 224621824 . A . PASS END=224621825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 224621826 . G . PASS END=224621837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,249:6,0 chr1 224621838 . A . PASS END=224621852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:8,0 chr1 224621853 . A . PASS END=224621853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr1 224621854 . G . PASS END=224621859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr1 224621860 . G . PASS END=224621860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 224621861 . C . PASS END=224621863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 224621864 . C . LowGQ END=224621905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:11,0:11:0:8:0,0,0:0,0,249:3,1 chr1 224621906 . C CGGA, 73.96 PASS DP=10;MQ=250.00;FractionInformativeReads=0.900 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,5,0:0,4,0:24:88,27,0,232,27,232:255,0,42:1,14:7.3960e+01,2.3960e+01,1.7490e-02,2.5304e+02,5.8778e+01,2.5612e+02:0.00,11.00,14.00,34.77,45.77,37.77:0,0,4,5:0,0,4,5 chr1 224621907 . G . LowGQ END=224621907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,9:12:0:12:0,0,0:255,0,80:10,0 chr1 224621908 . G . PASS END=224621919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 224621920 . G . PASS END=224621920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 224621921 . A . PASS END=224621921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 224621922 . G . PASS END=224621922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 224621923 . G . PASS END=224621924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 224621925 . G . PASS END=224621929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 224621930 . A . PASS END=224621931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 224621932 . G . PASS END=224621933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 224621934 . G . PASS END=224621934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 224621935 . G . PASS END=224621935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 224621936 . A . PASS END=224621936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 224621937 . C . PASS END=224621939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 224621940 . C . PASS END=224621940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 224621941 . G . PASS END=224621942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 224621943 . G . PASS END=224621943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 224621944 . G . PASS END=224621945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 224621946 . C . PASS END=224621946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 224621947 . G . PASS END=224621948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:17,0 chr1 224621949 . A . PASS END=224621949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr1 224621950 . G . PASS END=224621950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 224621951 . G . LowGQ END=224621951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,598:4,0,255:15,0 chr1 224621952 . G . PASS END=224621953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:18,0 chr1 224621954 . A . PASS END=224621954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr1 224621955 . G . PASS END=224621955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 224621956 . A . PASS END=224621956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,0 chr1 224621957 . G . PASS END=224621958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 224621959 . C . PASS END=224621959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr1 224621960 . C . PASS END=224621961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:18,0 chr1 224621962 . G . PASS END=224621962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:17,0 chr1 224621963 . C . PASS END=224621963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr1 224621964 . T . PASS END=224621966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:18,0 chr1 224621967 . G . PASS END=224621967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,612:0,10,255:17,0 chr1 224621968 . C . PASS END=224621969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr1 224621970 . T . PASS END=224621971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:18,0 chr1 224621972 . C . PASS END=224621972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 224621973 . C . PASS END=224621973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr1 224621974 . G . PASS END=224621974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 224621975 . A . PASS END=224621975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr1 224621976 . A . PASS END=224621976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:16,0 chr1 224621977 . G . PASS END=224621979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:17,0 chr1 224621980 . C . PASS END=224621980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:16,0 chr1 224621981 . C . PASS END=224621982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:16,0 chr1 224621983 . G . PASS END=224621983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,590:0,10,255:15,0 chr1 224621984 . G . PASS END=224621986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:37:18:0,37,585:0,37,255:13,0 chr1 224621987 . C . PASS END=224621988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:14,0 chr1 224621989 . C . PASS END=224621989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:14,0 chr1 224621990 . C . PASS END=224621990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:14,0 chr1 224621991 . T . PASS END=224621994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:14,0 chr1 224621995 . C . PASS END=224621995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:13,0 chr1 224621996 . C . PASS END=224621996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 224621997 . C . LowGQ END=224621997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,434:24,0,255:12,0 chr1 224621998 . T . PASS END=224621998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 224621999 . C . PASS END=224622000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 224622001 . G . PASS END=224622001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr1 224622002 . C . PASS END=224622009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 224622010 . G . PASS END=224622010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 224622011 . C . PASS END=224622011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 224622012 . T . PASS END=224622012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 224622013 . C . PASS END=224622019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,488:0,39,255:13,0 chr1 224622020 . T . PASS END=224622020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 224622021 . C . PASS END=224622031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 224622032 . G . PASS END=224622032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 224622033 . C . PASS END=224622058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 224622059 . C . PASS END=224622086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 224622087 . T . PASS END=224622092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 224622093 . G . LowGQ END=224622093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:6,0 chr1 224622094 . C . PASS END=224622095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 224622096 . G . PASS END=224622097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 224622098 . G . PASS END=224622102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 224622103 . G . LowGQ END=224622105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,200:0,0,209:7,0 chr1 224622106 . G . PASS END=224622107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 224622791 . A . PASS END=224622794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:28:0,73,1019:0,73,255:27,0 chr1 224622795 . G . PASS END=224622799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 224622800 . C . PASS END=224622800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 224622801 . A . PASS END=224622858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1030:0,83,255:37,0 chr1 224622859 . G . PASS END=224622865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:29:0,77,1078:0,77,255:26,0 chr1 224622866 . C . PASS END=224622866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 224622867 . A . PASS END=224622889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,856:0,64,255:26,0 chr1 224641980 . A . PASS END=224641989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,4:102:99:97:0,104,1800:0,104,255:40,0 chr1 224641990 . C . PASS END=224641990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,11:108:30:108:0,30,3049:0,30,255:40,0 chr1 224641991 . T . PASS END=224642010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,4:116:99:109:0,120,1800:0,150,255:40,0 chr1 224642011 . C . PASS END=224642045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,6:116:99:102:0,120,1800:0,132,255:40,0 chr1 224703560 . A . PASS END=224703586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,108,1620:0,110,255:40,0 chr1 224804877 . A . PASS END=224804880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:30,0 chr1 224804881 . C . PASS END=224804881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 224804882 . C . PASS END=224804883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1163:0,90,255:30,0 chr1 224804884 . T . PASS END=224804884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 224804885 . C . PASS END=224804885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 224804886 . A . PASS END=224804887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 224804888 . T . PASS END=224804888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 224804889 . T . PASS END=224804889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 224804890 . T . PASS END=224804893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 224804894 . T . PASS END=224804894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 224804895 . G . PASS END=224804898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 224804899 . T . PASS END=224804913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr1 224804914 . C . PASS END=224804914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:25,0 chr1 224804915 . T . PASS END=224804952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,800:0,66,255:26,0 chr1 224804953 . G . PASS END=224804953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 224804954 . G . PASS END=224804954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 224804955 . C . PASS END=224804957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 224868660 . A . PASS END=224868728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,159,255:40,0 chr1 224872498 . A . PASS END=224872510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1421:0,104,255:40,0 chr1 224872511 . G . PASS END=224872545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,120,1800:0,125,255:40,0 chr1 224918164 . C . PASS END=224918268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,120,1800:0,124,255:40,0 chr1 224918269 . T . PASS END=224918276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,111,1665:0,122,255:40,0 chr1 224922265 . G . PASS END=224922265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 224922266 . T . PASS END=224922266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,593:0,46,255:20,0 chr1 224922267 . A . PASS END=224922268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 224922269 . T . PASS END=224922269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,713:0,32,255:20,0 chr1 224922270 . T . PASS END=224922270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 224922271 . C . PASS END=224922272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,713:0,46,255:20,0 chr1 224922273 . A . PASS END=224922273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 224922274 . C . PASS END=224922287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,739:0,63,255:25,0 chr1 224922288 . G . PASS END=224922290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:28,0 chr1 224922291 . C . PASS END=224922291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 224922292 . A . PASS END=224922297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1017:0,84,255:30,0 chr1 224922298 . A . PASS END=224922298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 224922299 . G . PASS END=224922364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:31:0,80,1141:0,80,255:37,0 chr1 224922365 . A . PASS END=224922365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 224922366 . A . PASS END=224922366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 224922367 . G . PASS END=224922367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr1 224922368 . C . PASS END=224922373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 224922374 . T . PASS END=224922397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,71,255:25,0 chr1 224922398 . T . PASS END=224922398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 224922399 . A . PASS END=224922405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 224922406 . C . PASS END=224922408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr1 224927031 . C . PASS END=224927031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,8:69:38:69:0,38,2045:0,38,255:40,0 chr1 224927032 . A . PASS END=224927032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,5:69:96:69:0,96,2257:0,96,255:40,0 chr1 224927033 . T . PASS END=224927033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,6:69:34:69:0,34,1977:0,34,255:40,0 chr1 224927034 . G . PASS END=224927034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,8:73:20:73:0,20,2111:0,20,255:40,0 chr1 224927035 . A . PASS END=224927035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,5:78:93:78:0,93,2545:0,93,255:40,0 chr1 224927036 . T . PASS END=224927036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,8:78:50:78:0,50,2163:0,50,255:40,0 chr1 224927037 . C . PASS END=224927038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,9:78:26:78:0,26,2207:0,26,255:40,0 chr1 224927039 . A . PASS END=224927039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,6:79:99:79:0,116,2677:0,116,255:40,0 chr1 224927040 . C . PASS END=224927040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,8:79:23:79:0,23,2323:0,23,255:40,0 chr1 224927041 . A . PASS END=224927045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,3:81:80:79:0,80,1800:0,80,255:40,0 chr1 224927046 . A . PASS END=224927046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,7:81:60:81:0,60,2484:0,60,255:40,0 chr1 224927047 . G . PASS END=224927047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,8:81:30:81:0,30,2381:0,30,255:40,0 chr1 224927048 . T . PASS END=224927048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,4:81:96:81:0,96,2680:0,96,255:40,0 chr1 224927049 . G . PASS END=224927049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,7:81:32:81:0,32,2456:0,32,255:40,0 chr1 224927050 . A . PASS END=224927050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,4:81:99:81:0,120,1800:0,132,255:40,0 chr1 224927051 . G . PASS END=224927051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,6:81:77:81:0,77,2548:0,77,255:40,0 chr1 224927052 . C . PASS END=224927052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,6:81:99:81:0,108,2681:0,108,255:40,0 chr1 224927053 . T . PASS END=224927053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,7:81:45:81:0,45,2052:0,45,255:40,0 chr1 224927054 . C . PASS END=224927054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,5:81:99:81:0,101,2459:0,101,255:40,0 chr1 224927055 . T . PASS END=224927055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,9:81:49:81:0,49,2396:0,49,255:40,0 chr1 224927056 . T . PASS END=224927056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,5:81:71:81:0,71,2571:0,71,255:40,0 chr1 224927057 . A . PASS END=224927058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,4:81:99:80:0,120,1800:0,154,255:40,0 chr1 225083964 . A . PASS END=225084067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:41:0,90,1350:0,99,255:40,0 chr1 225110979 . T . PASS END=225111077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,102,1530:0,108,255:40,0 chr1 225117218 . C . PASS END=225117228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr1 225117229 . T . PASS END=225117235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr1 225117236 . G . PASS END=225117236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 225117237 . G . PASS END=225117240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1072:0,84,255:29,0 chr1 225117241 . C . PASS END=225117241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:27,0 chr1 225117242 . C . PASS END=225117250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1050:0,87,255:30,0 chr1 225117251 . C . PASS END=225117251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 225117252 . C . PASS END=225117257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 225117258 . T . PASS END=225117258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr1 225117259 . G . PASS END=225117262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 225117263 . T . PASS END=225117264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr1 225117265 . T . PASS END=225117270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 225117271 . G . PASS END=225117272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 225117273 . G . PASS END=225117347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1172:0,83,255:37,0 chr1 225117348 . T . PASS END=225117348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1062:0,79,255:26,0 chr1 225117349 . C . PASS END=225117391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,83,255:30,0 chr1 225117392 . C . PASS END=225117395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,87,255:26,0 chr1 225117396 . G . PASS END=225117396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr1 225117397 . A . PASS END=225117420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr1 225117421 . G . PASS END=225117469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,676:0,51,255:18,0 chr1 225117470 . C . PASS END=225117470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 225117471 . G . PASS END=225117483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 225117484 . A . PASS END=225117484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 225117485 . C . PASS END=225117487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 225117488 . T . PASS END=225117502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 225117503 . A . PASS END=225117504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 225117505 . G . LowGQ END=225117507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:8,0 chr1 225117508 . C . PASS END=225117508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 225117509 . A . LowGQ END=225117510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:8,0 chr1 225117511 . A . PASS END=225117511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr1 225117512 . A . LowGQ END=225117515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:10:0,0,266:0,0,255:9,0 chr1 225117516 . C . PASS END=225117516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 225117517 . C . LowGQ END=225117519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,247:9,0,255:7,0 chr1 225117520 . C . PASS END=225117520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 225117521 . G . LowGQ END=225117522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,258:9,0,255:7,0 chr1 225117523 . A . PASS END=225117523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 225117524 . C . PASS END=225117534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,249:6,0 chr1 225117535 . C . PASS END=225117537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 225140397 . A . PASS END=225140481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:60:0,120,1800:0,168,255:40,0 chr1 225142661 . A . PASS END=225142800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:51:0,120,1800:0,144,255:40,1 chr1 225147855 . A . PASS END=225148004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:36:0,81,1215:0,107,255:40,0 chr1 225152181 . A . PASS END=225152311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:57:0,114,1710:0,154,255:40,0 chr1 225155133 . A . PASS END=225155160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:37:0,82,1360:0,82,255:40,0 chr1 225155161 . T . PASS END=225155285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,112,1725:0,112,255:40,0 chr1 225155382 . A . PASS END=225155417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:66:0,120,1800:0,163,255:40,0 chr1 225156461 . G . PASS END=225156580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:80:43:0,80,1635:0,80,255:40,0 chr1 225161793 . A . PASS END=225161855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:87:0,120,1800:0,221,255:40,0 chr1 225190485 . G . PASS END=225190629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:54:0,120,1800:0,131,255:40,2 chr1 225195115 . C . PASS END=225195246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,129,255:40,0 chr1 225211317 . G . PASS END=225211541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:39:0,102,1530:0,110,255:40,1 chr1 225211542 . G . PASS END=225211542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,2 chr1 225211543 . A . PASS END=225211543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1357:0,51,255:34,2 chr1 225211544 . A . PASS END=225211544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:32,0 chr1 225211545 . A . PASS END=225211559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:35:0,96,1440:0,104,255:35,0 chr1 225211560 . C . PASS END=225211560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:32,0 chr1 225211561 . T . PASS END=225211571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1170:0,83,255:33,0 chr1 225226396 . A . PASS END=225226525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:57:0,120,1800:0,164,255:40,0 chr1 225230537 . A . PASS END=225230570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,102,1338:0,103,255:40,0 chr1 225230571 . G . PASS END=225230607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,126,255:40,0 chr1 225230608 . C T, 215.79 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,30,0:0,27,0:166:254,169,0,2016,169,2016:255,170,0:0,0:2.1579e+02,1.6579e+02,0.0000e+00,4.5000e+02,2.0056e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,41,16:0,0,24,33 chr1 225230609 . T . PASS END=225230645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,155,255:40,0 chr1 225230646 . C . PASS END=225230816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,120,1800:0,156,255:40,0 chr1 225231446 . A . PASS END=225231491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:90:0,120,1800:0,255,255:40,0 chr1 225231588 . A . PASS END=225231685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,114,1800:0,114,255:40,2 chr1 225237912 . C . PASS END=225237927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,108,1335:0,108,255:40,0 chr1 225237928 . T . PASS END=225238078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,134,255:40,0 chr1 225239153 . A . PASS END=225239497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:44:0,87,1288:0,87,255:40,0 chr1 225260556 . A . PASS END=225260597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1105:0,82,255:33,0 chr1 225266909 . G . PASS END=225266911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 225266912 . G . PASS END=225266913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 225266914 . G . PASS END=225266916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 225266917 . A . PASS END=225266928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:37,0 chr1 225266929 . G . PASS END=225266965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:38:0,95,1388:0,95,255:40,0 chr1 225266966 . C G, 206.05 PASS DP=53;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,18,0:0,35,0:156:244,159,0,2010,159,2010:255,159,0:0,0:2.0605e+02,1.5605e+02,0.0000e+00,4.5000e+02,1.9082e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,22:0,0,28,25 chr1 225266967 . T . PASS END=225267003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,134,255:40,0 chr1 225267004 . A . PASS END=225267051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,105,1575:0,122,255:40,0 chr1 225267052 . T . PASS END=225267052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1692:0,75,255:40,0 chr1 225267053 . G . PASS END=225267250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:38:0,90,1255:0,95,255:40,0 chr1 225268081 . A . PASS END=225268081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 225268082 . T . PASS END=225268100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,967:0,84,255:38,0 chr1 225268101 . A . PASS END=225268101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:37,0 chr1 225268102 . T . PASS END=225268278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:38:0,104,1389:0,104,255:40,0 chr1 225268279 . A . PASS END=225268279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1329:0,57,255:35,0 chr1 225268280 . T . PASS END=225268301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1395:0,90,255:38,0 chr1 225268302 . G . PASS END=225268342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1336:0,93,255:37,0 chr1 225268343 . A G, 164.38 PASS DP=40;MQ=249.64;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,40,0:1.000,0.000:40:0,18,0:0,22,0:114:202,117,0,302,302,302:255,120,0:0,0:1.6438e+02,1.1438e+02,0.0000e+00,2.9915e+02,3.3392e+02,3.0216e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,21:0,0,19,21:225268343 chr1 225268344 . G . PASS END=225268345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr1 225268346 . G A, 164.13 PASS DP=40;MQ=249.64;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,40,0:1.000,0.000:40:0,18,0:0,22,0:114:202,117,0,302,302,302:255,120,0:0,0:1.6413e+02,1.1413e+02,0.0000e+00,2.9890e+02,3.3367e+02,3.0192e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,21:0,0,19,21:225268343 chr1 225268347 . A . PASS END=225268383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1319:0,81,255:38,0 chr1 225268384 . A . PASS END=225268384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:34,0 chr1 225268385 . T . PASS END=225268387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 225268388 . A . PASS END=225268440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1151:0,83,255:36,0 chr1 225268441 . C . PASS END=225268441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 225268442 . T . PASS END=225268443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 225268444 . G . PASS END=225268450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 225270251 . G . PASS END=225270252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1045:0,93,255:32,0 chr1 225270253 . T . PASS END=225270253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr1 225270254 . T . PASS END=225270371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:32:0,96,1233:0,96,255:40,0 chr1 225270372 . C . PASS END=225270408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,105,1575:0,141,255:40,0 chr1 225270409 . A T, 188.00 PASS DP=47;MQ=249.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,29,0:0,18,0:138:226,141,0,1784,141,1784:255,141,0:0,0:1.8800e+02,1.3800e+02,0.0000e+00,4.5000e+02,1.7277e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,26:0,0,23,24 chr1 225270410 . A . PASS END=225270428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:30:0,81,1215:0,90,255:35,0 chr1 225270429 . T . PASS END=225270441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:27:0,73,928:0,73,255:26,0 chr1 225273246 . A . PASS END=225273247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr1 225273248 . G T, 191.00 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,25,0:0,23,0:141:229,144,0,1807,144,1807:255,144,0:0,0:1.9100e+02,1.4100e+02,0.0000e+00,4.5000e+02,1.7577e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,11:0,0,22,26 chr1 225273249 . T . PASS END=225273285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,111,1710:0,111,255:40,0 chr1 225273286 . C . PASS END=225273488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:93:37:0,93,1395:0,107,255:40,0 chr1 225273489 . A . PASS END=225273491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr1 225284820 . G . PASS END=225284941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:60:0,120,1800:0,172,255:40,0 chr1 225288415 . G . PASS END=225288463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,111,1540:0,112,255:40,3 chr1 225288464 . A . PASS END=225288464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,4:64:72:64:0,72,2121:0,72,255:40,3 chr1 225288465 . A . PASS END=225288586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,112,1568:0,112,255:40,0 chr1 225305386 . G . PASS END=225305490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,183,255:40,0 chr1 225305583 . C . PASS END=225305643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:71:0,120,1800:0,189,255:40,0 chr1 225305644 . G . PASS END=225305680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:91:0,120,1800:0,200,255:40,0 chr1 225305681 . G A, 47.89 PASS DP=92;MQ=250.00;MQRankSum=8.162;ReadPosRankSum=4.622;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:53,39,0:0.424,0.000:92:25,16,0:28,23,0:47:83,0,50,1332,1879,3211:255,0,255:40,0:4.7892e+01,9.2414e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,26,15,24:29,24,20,19 chr1 225305682 . G . PASS END=225305718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:76:0,120,1800:0,182,255:40,0 chr1 225305719 . A . PASS END=225305870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:93:43:0,93,1395:0,117,255:40,1 chr1 225306922 . G . PASS END=225306996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:66:0,120,1800:0,162,255:40,0 chr1 225311229 . A . PASS END=225311316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,130,255:40,0 chr1 225328433 . A . PASS END=225328723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:87:39:0,87,1350:0,87,255:40,0 chr1 225332099 . A . PASS END=225332294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:31:0,80,1045:0,80,255:40,0 chr1 225332295 . A . PASS END=225332295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:26,0 chr1 225332296 . C . PASS END=225332297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,96,255:28,0 chr1 225332298 . G . PASS END=225332321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,61,255:25,0 chr1 225332322 . C . PASS END=225332330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr1 225333028 . T . PASS END=225333081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,173,255:40,0 chr1 225334806 . A . PASS END=225334807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1283:0,111,255:37,0 chr1 225334808 . A . PASS END=225334808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:35,0 chr1 225334809 . G . PASS END=225334835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:37:0,94,1078:0,94,255:40,0 chr1 225334836 . C . PASS END=225334951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:98:37:0,98,1380:0,98,255:40,0 chr1 225339585 . T . PASS END=225339775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:40:0,105,1443:0,107,255:40,0 chr1 225340399 . A . PASS END=225340585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:88:35:0,88,1211:0,88,255:40,0 chr1 225341452 . G . PASS END=225341528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:81:0,120,1800:0,219,255:40,0 chr1 225347016 . T . PASS END=225347177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1215:0,83,255:40,0 chr1 225347178 . T . PASS END=225347181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 225347182 . T . PASS END=225347182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:27,0 chr1 225347183 . T . PASS END=225347184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 225347185 . G . PASS END=225347187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,92,255:29,0 chr1 225355641 . A . PASS END=225355730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:43:0,120,1800:0,129,255:40,0 chr1 225372993 . G . PASS END=225373127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:44:0,102,1612:0,102,255:40,0 chr1 225380398 . A . PASS END=225380613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:46:0,120,1800:0,124,255:40,0 chr1 225391885 . G . PASS END=225391975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:65:0,120,1800:0,134,255:40,0 chr1 225393673 . A . PASS END=225393682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,895:0,67,255:26,0 chr1 225393683 . G . PASS END=225393874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:28:0,81,1039:0,84,255:40,0 chr1 225393875 . C . PASS END=225393881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:34:0,69,1035:0,102,255:25,0 chr1 225394670 . G . PASS END=225394922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:95:35:0,95,1363:0,95,255:40,0 chr1 225418775 . G . PASS END=225418853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:76:0,120,1800:0,198,255:40,0 chr1 225428295 . G . PASS END=225428519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,102,1530:0,110,255:40,0 chr1 225428520 . A . PASS END=225428520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1358:0,76,255:34,0 chr1 225428521 . G . PASS END=225428524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,111,255:34,0 chr1 225438358 . G . PASS END=225438409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:47:0,120,1800:0,131,255:40,0 chr1 225440003 . G . PASS END=225440025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,112,1776:0,112,255:40,0 chr1 225440026 . T . PASS END=225440119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,118,1457:0,118,255:40,0 chr1 225445662 . G . PASS END=225445689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,156,255:40,0 chr1 225445690 . A . PASS END=225445820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:87:38:0,87,1305:0,113,255:40,0 chr1 225446823 . G . PASS END=225446955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:96:41:0,96,1435:0,107,255:40,0 chr1 225451899 . T . PASS END=225451963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:75:0,120,1800:0,207,255:40,0 chr1 225452884 . A . PASS END=225453071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:46:0,110,1668:0,110,255:40,0 chr1 225454343 . A . PASS END=225454471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,106,1479:0,106,255:40,0 chr1 225458437 . A . PASS END=225458567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1202:0,83,255:40,0 chr1 225458568 . G . PASS END=225458568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 225459608 . G . PASS END=225459775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:35:0,84,1244:0,84,255:40,0 chr1 225460657 . C . PASS END=225460659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 225460660 . C . PASS END=225460663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 225460664 . T . PASS END=225460670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,955:0,69,255:26,0 chr1 225460671 . G . PASS END=225460677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 225460678 . G . PASS END=225460678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 225460679 . C . PASS END=225460827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:28:0,84,1063:0,84,255:40,0 chr1 225463592 . T . PASS END=225463597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,176,255:40,0 chr1 225463616 . A . PASS END=225463734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,189,255:40,0 chr1 225463735 . C . PASS END=225463771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:64:0,120,1800:0,181,255:40,0 chr1 225463772 . A G, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.868;ReadPosRankSum=5.660;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,32,0:0.500,0.000:64:18,12,0:14,20,0:48:85,0,50,1116,1136,2252:255,0,255:28,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,22,6,26:20,12,16,16 chr1 225463773 . T . PASS END=225463783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,180,255:40,0 chr1 225465112 . C . PASS END=225465204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:94:41:0,94,1512:0,94,255:40,0 chr1 225477587 . A . PASS END=225477784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:90:39:0,90,1537:0,90,255:40,0 chr1 225488571 . G . PASS END=225488714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:91:43:0,91,1462:0,91,255:40,0 chr1 225488715 . C . PASS END=225488715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1269:0,79,255:34,0 chr1 225488716 . T . PASS END=225488732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1440:0,111,255:37,0 chr1 225490858 . A . PASS END=225490859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 225490860 . A . PASS END=225490860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:25,0 chr1 225490861 . A . PASS END=225490862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 225490863 . A . PASS END=225490863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr1 225490864 . T . PASS END=225490874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 225490875 . T . PASS END=225490875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 225490876 . C . PASS END=225490877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 225490878 . T . PASS END=225490878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 225490879 . A . PASS END=225490879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:26,2 chr1 225490880 . T . PASS END=225490880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:26:32:0,26,1011:0,26,255:26,2 chr1 225490881 . T . PASS END=225490881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:27,0 chr1 225490882 . T . PASS END=225490883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr1 225490884 . T . PASS END=225490887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 225490888 . A . PASS END=225491049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:33:0,81,1215:0,89,255:40,0 chr1 225492610 . A . PASS END=225492787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:83:37:0,83,1191:0,83,255:40,0 chr1 225492788 . A . PASS END=225492791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:35:0,69,1035:0,91,255:24,0 chr1 225495163 . G . PASS END=225495271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:92:36:0,92,1340:0,92,255:40,0 chr1 225495987 . G . PASS END=225496112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:51:0,120,1800:0,153,255:40,0 chr1 225506285 . A . PASS END=225506285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:32,0 chr1 225506286 . A . PASS END=225506296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1341:0,95,255:32,0 chr1 225506297 . G . PASS END=225506297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr1 225506298 . A . PASS END=225506379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1210:0,86,255:40,1 chr1 225510366 . A . PASS END=225510525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:40:0,107,1504:0,107,255:40,0 chr1 225511924 . G . PASS END=225512055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:44:0,84,1260:0,106,255:40,2 chr1 225512439 . G . PASS END=225512534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,128,255:40,0 chr1 225519139 . G . PASS END=225519279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:40:0,99,1485:0,109,255:40,0 chr1 225520993 . A . PASS END=225521208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:51:0,120,1800:0,140,255:40,0 chr1 225524968 . A . PASS END=225524971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:16,0 chr1 225524972 . G . PASS END=225524972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 225524973 . C . PASS END=225524981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 225524982 . T . PASS END=225524982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 225524983 . A . PASS END=225524984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr1 225524985 . T . PASS END=225524985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 225524986 . C . PASS END=225524993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr1 225524994 . G . PASS END=225525001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:26,0 chr1 225525002 . G . PASS END=225525004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 225525005 . A . PASS END=225525005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,864:0,64,255:26,0 chr1 225525006 . G . PASS END=225525018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:98:34:0,98,1264:0,98,255:37,0 chr1 225525019 . A . PASS END=225525019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1072:0,63,255:35,0 chr1 225525020 . A . PASS END=225525055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:38:0,85,1300:0,85,255:40,0 chr1 225525056 . T . PASS END=225525056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1276:0,65,255:38,0 chr1 225525057 . G . PASS END=225525198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:36:0,92,1238:0,92,255:40,0 chr1 225525763 . A . PASS END=225525765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1219:0,81,255:37,0 chr1 225525766 . C . PASS END=225525766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1435:0,79,255:38,0 chr1 225525767 . T . PASS END=225525884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:91:42:0,91,1543:0,91,255:40,0 chr1 225525961 . T . PASS END=225525989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,229,255:40,0 chr1 225528159 . G . PASS END=225528403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:84:42:0,84,1260:0,106,255:40,0 chr1 225533664 . G . PASS END=225534082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:47:0,120,1800:0,125,255:40,1 chr1 225534158 . G . PASS END=225534356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:53:0,120,1800:0,159,255:40,0 chr1 225539349 . G . PASS END=225539359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:24,0 chr1 225539360 . A . PASS END=225539360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr1 225539361 . T . PASS END=225539368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr1 225539369 . A . PASS END=225539372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 225539373 . A . PASS END=225539373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 225539374 . A . PASS END=225539375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,936:0,84,255:30,0 chr1 225539376 . A . PASS END=225539376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:29,0 chr1 225539377 . T . PASS END=225539383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1127:0,93,255:32,0 chr1 225539384 . T . PASS END=225539384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr1 225539385 . G . PASS END=225539407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:32:0,96,1194:0,96,255:39,0 chr1 225539408 . C . PASS END=225539408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr1 225539409 . A . PASS END=225539585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:39:0,108,1620:0,117,255:40,0 chr1 225541505 . C . PASS END=225541519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,167,255:40,0 chr1 225541520 . A . PASS END=225541560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:60:0,120,1800:0,163,255:40,0 chr1 225541561 . A . LowGQ END=225541561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,17:68:0:68:0,0,1332:121,0,255:40,0 chr1 225541562 . A . PASS END=225541563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,8:68:70:68:0,70,1769:0,70,255:40,0 chr1 225541564 . C . LowGQ END=225541564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,13:67:0:67:0,0,1516:116,0,255:40,0 chr1 225541565 . T . PASS END=225541590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,139,255:40,0 chr1 225541826 . A . PASS END=225541873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,117,1421:0,117,255:40,0 chr1 225541876 . A . PASS END=225541958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,82,255:40,0 chr1 225541959 . A . PASS END=225541971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr1 225541972 . A . PASS END=225541972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 225541973 . C . PASS END=225541975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:20,0 chr1 225545470 . G . PASS END=225545572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:44:0,117,1755:0,132,255:40,0 chr1 225546198 . G . PASS END=225546354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,137,255:40,0 chr1 225548383 . G . PASS END=225548400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr1 225548401 . T . PASS END=225548401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 225548402 . C . PASS END=225548403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 225548404 . T . PASS END=225548404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:30,0 chr1 225548405 . C . PASS END=225548412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1173:0,93,255:33,0 chr1 225548413 . T . PASS END=225548413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1119:0,47,255:31,0 chr1 225548414 . T . PASS END=225548574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1205:0,81,255:40,0 chr1 225548575 . T . PASS END=225548575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1011:0,66,255:29,0 chr1 225548576 . T . PASS END=225548586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1170:0,83,255:30,0 chr1 225548587 . T . PASS END=225548587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 225548588 . A . PASS END=225548589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 225548590 . A . PASS END=225548593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 225552494 . T . PASS END=225552596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,135,255:40,0 chr1 225555507 . A . PASS END=225555734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:48:0,120,1800:0,144,255:40,0 chr1 225562390 . G . PASS END=225562416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:30:0,80,1080:0,80,255:37,0 chr1 225562417 . C . PASS END=225562419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:73:37:0,73,1329:0,73,255:37,0 chr1 225562420 . A . PASS END=225562420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1449:0,114,255:38,0 chr1 225562421 . G . PASS END=225562421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr1 225562422 . A . PASS END=225562581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:32:0,81,1215:0,81,255:40,0 chr1 225562582 . G . PASS END=225562587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:30:0,66,990:0,76,255:26,0 chr1 225564939 . A . PASS END=225564940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 225564941 . A . PASS END=225564941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 225564942 . T . PASS END=225564943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 225564944 . T . PASS END=225564944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 225564945 . C . PASS END=225564948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 225564949 . C . PASS END=225564949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 225564950 . A . PASS END=225564955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:25,0 chr1 225564956 . A . PASS END=225564956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:24,0 chr1 225564957 . G . PASS END=225564962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,931:0,62,255:26,0 chr1 225564963 . G . PASS END=225565040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,967:0,81,255:40,0 chr1 225565041 . G . PASS END=225565041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 225565042 . A . PASS END=225565050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1349:0,95,255:36,0 chr1 225565051 . G . PASS END=225565051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:34,0 chr1 225565052 . G . PASS END=225565118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,88,255:36,0 chr1 225565119 . A . PASS END=225565134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:27:0,65,945:0,65,255:26,0 chr1 225565135 . T . PASS END=225565138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,53,255:15,0 chr1 225567861 . A . PASS END=225568007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:34:0,81,1215:0,102,255:40,0 chr1 225568008 . T . PASS END=225568012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr1 225568013 . A . PASS END=225568016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 225568017 . T . PASS END=225568017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1002:0,79,255:27,0 chr1 225568018 . C . PASS END=225568023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 225568024 . G . PASS END=225568024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 225569085 . A . PASS END=225569281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:87:33:0,87,1305:0,99,255:40,2 chr1 225576081 . A . PASS END=225576193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:38:0,93,1395:0,107,255:40,0 chr1 225577436 . G . PASS END=225577575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,105,1575:0,125,255:40,0 chr1 225579993 . C . PASS END=225580005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr1 225580006 . T . PASS END=225580006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr1 225580007 . G . PASS END=225580132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1020:0,80,255:40,0 chr1 225580133 . A . PASS END=225580135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 225580136 . G . PASS END=225580136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:22,0 chr1 225580137 . T . PASS END=225580144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,840:0,61,255:25,0 chr1 225580145 . G . PASS END=225580153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:45:24:0,45,675:0,56,255:18,0 chr1 225586222 . G . PASS END=225586357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:38:0,85,1429:0,85,255:40,0 chr1 225586358 . T . PASS END=225586358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:35,0 chr1 225586359 . G . PASS END=225586368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1258:0,94,255:37,0 chr1 225586756 . A . PASS END=225586783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:41:0,95,1403:0,95,255:40,0 chr1 225586784 . A . PASS END=225586953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:32:0,81,1170:0,83,255:40,0 chr1 225586954 . G . PASS END=225586970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:26:0,63,895:0,63,255:26,0 chr1 225586971 . A . PASS END=225586971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:21,0 chr1 225589205 . G . PASS END=225589205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 225589236 . T . PASS END=225589236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 225589410 . T . PASS END=225589410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr1 225589419 . C . PASS END=225589419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1233:0,96,255:32,0 chr1 225589507 . A . PASS END=225589507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 225589700 . G . PASS END=225589700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:35,0 chr1 225589804 . T . PASS END=225589805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 225589877 . C . PASS END=225589877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr1 225589956 . G . PASS END=225589956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 225590319 . T . PASS END=225590319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr1 225590381 . A . PASS END=225590381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr1 225590643 . A . PASS END=225590643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,202,255:40,0 chr1 225590972 . G . PASS END=225590972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:92:0,120,1800:0,255,255:40,0 chr1 225590978 . G . PASS END=225590978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:91:0,120,1800:0,255,255:40,0 chr1 225591005 . T . PASS END=225591165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,2:92:99:62:0,120,1800:0,170,255:40,0 chr1 225592106 . C . PASS END=225592228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:33:0,90,1350:0,99,255:40,0 chr1 225592232 . T . PASS END=225592232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,163,255:40,0 chr1 225592328 . G . PASS END=225592408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:78:0,120,1800:0,203,255:40,0 chr1 225592417 . T . PASS END=225592417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr1 225594366 . G . PASS END=225594534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:32:0,81,1215:0,92,255:40,0 chr1 225594542 . G . PASS END=225594542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:35:0,69,1035:0,89,255:23,0 chr1 225594544 . T . PASS END=225594544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr1 225597990 . T . PASS END=225597990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1506:0,120,255:40,0 chr1 225597993 . C . PASS END=225598118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:39:0,101,1396:0,101,255:40,0 chr1 225598473 . C . PASS END=225598520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,104,1490:0,104,255:40,0 chr1 225599035 . A . PASS END=225599035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 225599039 . C . PASS END=225599142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:84:66:0,84,1800:0,84,255:40,0 chr1 225600156 . C . PASS END=225600159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:32,0 chr1 225600160 . G . PASS END=225600301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:32:0,96,1233:0,96,255:40,0 chr1 225600302 . A . PASS END=225600327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:46:0,87,1305:0,129,255:40,0 chr1 225600328 . C . PASS END=225600339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:60:40:0,60,900:0,109,255:26,0 chr1 225600340 . A . PASS END=225600347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:57:36:0,57,855:0,87,255:19,0 chr1 225600351 . TA T,TAA,TAAA,AA, 0.23 DRAGENIndelHardQUAL DP=32;MQ=250.00;MQRankSum=4.539;ReadPosRankSum=0.285;FractionInformativeReads=0.906;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:16,5,5,2,1,0:0.172,0.172,0.069,0.034,0.000:29:9,2,3,0,1,0:7,3,2,2,0,0:13:0,31,81,7,61,57,38,112,161,88,81,195,166,276,131,21,81,72,118,160,80:255,0,255:16,17:2.2885e-01,3.6966e+01,8.9966e+01,1.2917e+01,7.3497e+01,6.5917e+01,4.4132e+01,1.2414e+02,1.7341e+02,9.7132e+01,1.1643e+02,2.3578e+02,2.0685e+02,3.1704e+02,1.6943e+02,5.6014e+01,1.2214e+02,1.1284e+02,1.5939e+02,2.2983e+02,1.1777e+02:0.00,6.00,9.00,6.00,12.00,9.00,6.00,12.00,12.00,9.00,34.77,40.77,40.77,40.77,37.77,34.77,40.77,40.77,40.77,69.54,37.77:6,10,4,9:11,5,5,8 chr1 225602980 . C . PASS END=225603034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:104:0,120,1800:0,247,255:40,0 chr1 225603039 . A . PASS END=225603039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:96:0,120,1800:0,255,255:40,0 chr1 225603042 . G . PASS END=225603042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,2:96:99:96:0,120,1800:0,255,255:40,0 chr1 225605686 . C . PASS END=225605700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,886:0,64,255:26,0 chr1 225605701 . T . PASS END=225605877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,1215:0,84,255:40,0 chr1 225605878 . C . PASS END=225605882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:32:0,75,1125:0,96,255:26,0 chr1 225606965 . C . PASS END=225607138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:31:0,90,977:0,92,255:40,0 chr1 225607139 . A . PASS END=225607154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,79,255:26,0 chr1 225607417 . C . PASS END=225607418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:63:0,120,1800:0,178,255:40,0 chr1 225607419 . G . PASS END=225607500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,125,255:40,0 chr1 225607505 . A . PASS END=225607505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 225609779 . C . PASS END=225609784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 225609785 . C . PASS END=225609789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 225609790 . G . PASS END=225609790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 225609791 . A . PASS END=225609801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr1 225609802 . C . PASS END=225609802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 225609803 . T . PASS END=225609804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 225609805 . C . PASS END=225609805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 225609806 . C . PASS END=225609816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1119:0,90,255:39,0 chr1 225609817 . T . PASS END=225609817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr1 225609818 . T . PASS END=225609966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1215:0,80,255:40,0 chr1 225609967 . A . PASS END=225609967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 225609968 . G . PASS END=225609973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 225609974 . T . PASS END=225609979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:24,0 chr1 225609981 . T . PASS END=225609981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 225609991 . G . PASS END=225609991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 225611613 . C . PASS END=225611618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:88:45:0,88,1525:0,88,255:40,0 chr1 225611619 . A . PASS END=225611619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:35:45:0,35,1255:0,35,255:38,0 chr1 225611620 . T . PASS END=225611777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:38:0,93,1395:0,101,255:40,0 chr1 225615642 . G . PASS END=225615642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 225615680 . C . PASS END=225615680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 225615682 . G . PASS END=225615682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 225615706 . C . PASS END=225615707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,178:4,0 chr1 225615712 . C . PASS END=225615712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 225615803 . C . PASS END=225615803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 225615810 . C . PASS END=225615810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 225685477 . C . PASS END=225685514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,156,255:40,0 chr1 225686049 . C . PASS END=225686106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:82:0,120,1800:0,213,255:40,0 chr1 225688694 . C . PASS END=225688772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:35:0,93,1395:0,105,255:40,0 chr1 225692693 . C . PASS END=225692755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,172,255:40,0 chr1 225695653 . C . PASS END=225695719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,120,1800:0,125,255:40,0 chr1 225699513 . C . PASS END=225699561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:83:0,120,1800:0,249,255:40,0 chr1 225700359 . A . PASS END=225700416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:87:0,120,1800:0,221,255:40,1 chr1 225700573 . C . PASS END=225700687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:85:38:0,85,1395:0,85,255:40,0 chr1 225700688 . T . PASS END=225700690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:66:35:0,66,1249:0,66,255:31,0 chr1 225700691 . C . PASS END=225700711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:29,0 chr1 225700712 . C . PASS END=225700712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 225700713 . C . PASS END=225700714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 225700715 . C . PASS END=225700718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 225702298 . C . PASS END=225702306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr1 225702307 . T . PASS END=225702313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:15,0 chr1 225702314 . A . PASS END=225702314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:14,0 chr1 225702315 . G . PASS END=225702315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 225702316 . T . PASS END=225702319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,558:0,48,255:16,0 chr1 225702320 . G . PASS END=225702320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 225702321 . C . PASS END=225702321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 225702322 . T . PASS END=225702322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 225702323 . C . PASS END=225702326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr1 225702327 . C . PASS END=225702327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 225702328 . A . PASS END=225702328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 225702329 . A . PASS END=225702329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr1 225702330 . T . PASS END=225702331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 225702332 . G . PASS END=225702332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 225702333 . C . PASS END=225702342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr1 225702343 . T . PASS END=225702343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 225702344 . C . PASS END=225702347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 225702348 . T . PASS END=225702351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr1 225702352 . A . PASS END=225702361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 225702362 . T . LowGQ END=225702362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,504:15,0,255:15,0 chr1 225702363 . C . PASS END=225702367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 225702368 . G . PASS END=225702368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:15,0 chr1 225702369 . A . PASS END=225702378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:16,0 chr1 225702379 . C . PASS END=225702379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:15,0 chr1 225702380 . A . PASS END=225702382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 225702383 . A . PASS END=225702383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 225702384 . A . PASS END=225702387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 225702388 . T . PASS END=225702388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 225702389 . C . PASS END=225702390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:16,0 chr1 225702391 . A . PASS END=225702391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,430:0,17,255:15,0 chr1 225702392 . G . PASS END=225702394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr1 225702395 . G . PASS END=225702396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 225702397 . A . PASS END=225702413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 225702414 . G . PASS END=225702415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:17,0 chr1 225702416 . G . PASS END=225702416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr1 225702417 . G . PASS END=225702417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 225702418 . T . PASS END=225702418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 225702419 . G . PASS END=225702420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 225702421 . T . PASS END=225702421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:15,0 chr1 225702422 . G . PASS END=225702423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:16,0 chr1 225702424 . A . PASS END=225702425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,576:0,18,255:15,0 chr1 225702426 . G . PASS END=225702426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 225702427 . A . PASS END=225702427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:15,0 chr1 225702428 . G . PASS END=225702429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:17,0 chr1 225702430 . A . PASS END=225702430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:13,0 chr1 225702431 . G . PASS END=225702431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 225702432 . G . PASS END=225702432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 225702433 . G . PASS END=225702433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 225702434 . G . PASS END=225702434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 225702435 . G . PASS END=225702435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 225702436 . T . PASS END=225702436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,480:0,4,255:13,0 chr1 225702437 . A . PASS END=225702437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:14,0 chr1 225702438 . C . PASS END=225702438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr1 225702439 . T . LowGQ END=225702440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:17:0,0,504:0,0,255:14,0 chr1 225702441 . G . PASS END=225702441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr1 225702442 . A . LowGQ END=225702445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,447:0,0,255:14,0 chr1 225702446 . G . PASS END=225702446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 225702447 . G . PASS END=225702447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:14,0 chr1 225702448 . G . LowGQ END=225702449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,524:0,0,255:14,0 chr1 225702450 . G . PASS END=225702450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:16,0 chr1 225702451 . A . LowGQ END=225702451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,409:32,0,255:13,0 chr1 225702452 . G . PASS END=225702452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr1 225702453 . G . PASS END=225702453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 225702454 . A . LowGQ END=225702454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,488:29,0,255:15,0 chr1 225702455 . G . PASS END=225702458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 225702459 . G . PASS END=225702459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 225702460 . A . LowGQ END=225702460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,6:20:0:20:0,0,377:62,0,255:14,0 chr1 225702461 . G . PASS END=225702461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 225702462 . G . PASS END=225702462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr1 225702463 . A . LowGQ END=225702463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,439:37,0,255:15,0 chr1 225702464 . G . PASS END=225702464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 225702465 . G . PASS END=225702465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 225702466 . G . PASS END=225702466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 225702467 . G . PASS END=225702467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 225702468 . G . PASS END=225702468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 225702469 . C . PASS END=225702469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:19,0 chr1 225702470 . G . PASS END=225702471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 225702472 . T . PASS END=225702472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,571:0,13,255:20,0 chr1 225702473 . G . PASS END=225702474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 225702475 . A . LowGQ END=225702475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,590:3,0,255:19,0 chr1 225702476 . G . PASS END=225702476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 225702477 . G . PASS END=225702479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,678:0,33,255:23,0 chr1 225702480 . C . PASS END=225702480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,689:0,55,255:23,0 chr1 225702481 . G . PASS END=225702482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 225702483 . T . LowGQ END=225702483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,599:14,0,255:19,0 chr1 225702484 . G . PASS END=225702485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 225702486 . A . LowGQ END=225702486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,673:13,0,255:19,0 chr1 225702487 . T . PASS END=225702487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,760:0,42,255:21,0 chr1 225702488 . G . PASS END=225702489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 225702490 . G . PASS END=225702490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:5:25:0,5,739:0,5,255:21,0 chr1 225702491 . A . PASS END=225702491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:19,0 chr1 225702492 . G . PASS END=225702492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 225702493 . T . PASS END=225702493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:11:25:0,11,684:0,11,255:19,0 chr1 225702494 . G . PASS END=225702494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:21,0 chr1 225702495 . G . PASS END=225702495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 225702496 . A . PASS END=225702496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,698:0,25,255:17,0 chr1 225702497 . G . PASS END=225702498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 225702499 . A . LowGQ END=225702499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,707:3,0,255:19,0 chr1 225702500 . G . PASS END=225702501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr1 225702502 . T . PASS END=225702502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,767:0,6,255:20,0 chr1 225702503 . G . PASS END=225702503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 225702504 . G . PASS END=225702504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:25,0 chr1 225702505 . A . PASS END=225702505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,851:0,21,255:23,0 chr1 225702506 . G . PASS END=225702506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr1 225702507 . G . PASS END=225702507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 225702508 . G . PASS END=225702509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:28:0,48,922:0,48,255:26,0 chr1 225702510 . G . PASS END=225702510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,897:0,67,255:27,0 chr1 225702511 . C . PASS END=225702512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr1 225702513 . C . PASS END=225702514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,793:0,40,255:27,0 chr1 225702515 . G . PASS END=225702515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 225702516 . G . PASS END=225702518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 225702519 . G . PASS END=225702519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:26:31:0,26,847:0,26,255:26,0 chr1 225702520 . A . PASS END=225702522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,960:0,76,255:30,0 chr1 225702523 . A . PASS END=225702523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1036:0,57,255:30,0 chr1 225702524 . G . PASS END=225702524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 225702525 . G . PASS END=225702525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:29,0 chr1 225702526 . G . PASS END=225702529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1111:0,80,255:32,0 chr1 225702530 . G . PASS END=225702530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 225702531 . C . PASS END=225702575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:29:0,80,1113:0,80,255:36,0 chr1 225702576 . G . PASS END=225702592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,884:0,61,255:26,0 chr1 225702593 . A . PASS END=225702595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 225702596 . A . PASS END=225702598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr1 225702599 . A . PASS END=225702602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 225704898 . C . PASS END=225704904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,513:0,45,255:19,0 chr1 225704905 . G . PASS END=225704913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:21,0 chr1 225704914 . C . PASS END=225704914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 225704915 . T . PASS END=225704921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:26,0 chr1 225704922 . G . PASS END=225704927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 225704928 . A . PASS END=225704928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:28,0 chr1 225704929 . G . PASS END=225704939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:30,0 chr1 225704940 . A . PASS END=225704940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 225704941 . G . PASS END=225704949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr1 225704950 . A . PASS END=225704950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr1 225704951 . G . PASS END=225704960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 225704961 . A . PASS END=225704961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr1 225704962 . G . PASS END=225704971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1141:0,90,255:31,0 chr1 225704972 . A . PASS END=225704972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:30,0 chr1 225704973 . C . PASS END=225704973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:30,0 chr1 225704974 . A . PASS END=225704974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 225704975 . G . PASS END=225704980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,86,255:30,0 chr1 225704981 . A . PASS END=225704981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:30,0 chr1 225704982 . G . PASS END=225705227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:32:0,84,1218:0,84,255:40,0 chr1 225705228 . T . PASS END=225705229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1078:0,77,255:28,0 chr1 225705230 . T . PASS END=225705233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 225705234 . G . PASS END=225705234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 225705235 . C . PASS END=225705235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 225705236 . A . PASS END=225705253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:28:0,60,900:0,71,255:28,0 chr1 225705254 . A . PASS END=225705254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,704:0,50,255:20,0 chr1 225705255 . C . PASS END=225705260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:22,0 chr1 225705261 . G . PASS END=225705261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:21,0 chr1 225705262 . G . PASS END=225705265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,915:0,64,255:23,0 chr1 225705266 . G . PASS END=225705266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:19,0 chr1 225705267 . G . PASS END=225705270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:22,0 chr1 225705271 . T . PASS END=225705271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:21,0 chr1 225705272 . G . PASS END=225705274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,976:0,65,255:25,0 chr1 225705275 . C . PASS END=225705275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:24,0 chr1 225705276 . C . PASS END=225705277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:25,0 chr1 225705278 . G . PASS END=225705278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 225705279 . T . PASS END=225705279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 225705280 . A . PASS END=225705280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 225705281 . G . PASS END=225705282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 225705283 . T . PASS END=225705283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:27:25:0,27,701:0,27,255:23,0 chr1 225705284 . T . PASS END=225705284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:23,0 chr1 225705285 . T . PASS END=225705285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 225705286 . G . PASS END=225705286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 225705287 . C . PASS END=225705287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,868:0,44,255:23,0 chr1 225705288 . C . PASS END=225705289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 225705290 . G . PASS END=225705290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr1 225705291 . G . PASS END=225705295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,886:0,61,255:24,0 chr1 225705296 . C . PASS END=225705296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,872:0,47,255:23,0 chr1 225705297 . T . PASS END=225705307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:26,0 chr1 225705308 . A . PASS END=225705308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,874:0,45,255:26,0 chr1 225705309 . T . PASS END=225705312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 225705313 . A . PASS END=225705314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 225705315 . G . PASS END=225705317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:32,0 chr1 225705318 . A . PASS END=225705318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1119:0,75,255:31,0 chr1 225705319 . T . PASS END=225705322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:33,0 chr1 225705323 . G . PASS END=225705323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1194:0,53,255:31,0 chr1 225705324 . G . PASS END=225705327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:33:0,82,1113:0,82,255:33,0 chr1 225705328 . G . PASS END=225705328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:19:33:0,19,959:0,19,255:28,0 chr1 225705329 . G . PASS END=225705329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1031:0,39,255:30,0 chr1 225705330 . G . PASS END=225705335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1115:0,88,255:34,0 chr1 225705336 . A . PASS END=225705336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1231:0,75,255:33,0 chr1 225705337 . A . PASS END=225705679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1111:0,84,255:40,0 chr1 225705680 . T . PASS END=225705680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 225705681 . C . PASS END=225705687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1172:0,93,255:31,0 chr1 225705688 . T . PASS END=225705692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 225706826 . T . PASS END=225707032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:96:66:0,96,1800:0,96,255:40,0 chr1 225707033 . A . LowGQ END=225707033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,7:81:0:81:0,0,2521:20,0,255:40,3 chr1 225707034 . T . PASS END=225707053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:73:0,120,1800:0,166,255:40,0 chr1 225707054 . C . PASS END=225707104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,147,255:40,1 chr1 225707105 . T . LowGQ END=225707105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,8:61:0:61:0,0,1575:105,0,255:40,0 chr1 225707106 . T . PASS END=225707108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr1 225707109 . C . LowGQ END=225707109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,6:62:0:62:0,0,1827:24,0,255:40,0 chr1 225707110 . G . PASS END=225707110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr1 225707111 . T . LowGQ END=225707113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,7:63:0:63:0,0,1825:16,0,255:40,0 chr1 225707114 . T . PASS END=225707115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,170,255:40,0 chr1 225707116 . G . LowGQ END=225707119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,5:62:0:60:0,0,1535:7,0,255:40,0 chr1 225707120 . C . PASS END=225707121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:81:62:0,81,1930:0,81,255:40,0 chr1 225707122 . C . LowGQ END=225707122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:0:63:0,0,1773:0,0,255:40,0 chr1 225707123 . T . PASS END=225707123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 225707124 . C . PASS END=225707125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,4:69:74:69:0,74,2100:0,74,255:40,0 chr1 225707126 . C . PASS END=225707127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,110,1800:0,110,255:40,0 chr1 225707128 . C . PASS END=225707128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,4:68:72:68:0,72,2264:0,72,255:40,0 chr1 225707129 . C . PASS END=225707129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,5:67:52:67:0,52,2194:0,52,255:40,0 chr1 225707130 . A . PASS END=225707154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:88:62:0,88,1800:0,88,255:40,0 chr1 225707155 . T . PASS END=225707225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,131,255:40,0 chr1 225707226 . T . PASS END=225707245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:84:46:0,84,1260:0,88,255:40,0 chr1 225707246 . C . PASS END=225707252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:63:43:0,63,945:0,91,255:26,0 chr1 225707253 . T . PASS END=225707267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:45:33:0,45,675:0,87,255:19,0 chr1 225718256 . C . PASS END=225718340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:47:0,96,1440:0,105,255:40,0 chr1 225718748 . C . PASS END=225718759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:98:0,120,1800:0,255,255:40,0 chr1 225723209 . C . PASS END=225723265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,170,255:40,0 chr1 225742608 . C . PASS END=225742618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 225742619 . G . PASS END=225742768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:29:0,80,1072:0,80,255:40,0 chr1 225742769 . G . PASS END=225742785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:45:20:0,45,675:0,60,255:19,0 chr1 225754951 . C . PASS END=225754955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1008:0,78,255:26,0 chr1 225754956 . G . PASS END=225754963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,958:0,81,255:36,0 chr1 225754964 . A . PASS END=225754964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:35,0 chr1 225754965 . T . PASS END=225755105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:38:0,87,1305:0,98,255:40,0 chr1 225755106 . T . PASS END=225755116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:31:0,72,1080:0,86,255:26,0 chr1 225840020 . C . PASS END=225840066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:36:0,98,1388:0,98,255:39,0 chr1 225840388 . C . PASS END=225840392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 225840664 . C . PASS END=225840669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 225840670 . G . PASS END=225840680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 225840681 . C . PASS END=225840706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 225840707 . C . PASS END=225840714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 225840715 . G . PASS END=225840717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,45,255:9,0 chr1 225840718 . T . PASS END=225840729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:9:0,18,270:0,27,255:6,0 chr1 225840730 . C . PASS END=225840741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 225840742 . C . PASS END=225840746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr1 225840747 . G . LowGQ END=225840852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr1 225840853 . G . PASS END=225840898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:5,0 chr1 225840899 . T . LowGQ END=225840899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 225840900 . C . PASS END=225840900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 225840901 . C . LowGQ END=225840901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 225840902 . T . PASS END=225840902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 225840903 . T . LowGQ END=225840903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 225840904 . C . PASS END=225840920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 225840921 . G . LowGQ END=225840921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 225840922 . C . PASS END=225840934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,164:6,0 chr1 225840935 . G . PASS END=225840939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 225840940 . G . PASS END=225840940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 225840941 . G . PASS END=225840941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 225840942 . A . PASS END=225840942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,211:6,0 chr1 225840943 . A . LowGQ END=225840945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,53:0,0,118:7,1 chr1 225840946 . G . PASS END=225840948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 225840949 . A . LowGQ END=225840949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,92:48,0,140:5,0 chr1 225840950 . G . PASS END=225840951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 225840952 . C . LowGQ END=225840952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,4:9:0:9:0,0,61:106,0,167:5,0 chr1 225840953 . G . PASS END=225840955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 225840956 . G . PASS END=225840957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 225840958 . G . LowGQ END=225840958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,225:3,0,228:8,0 chr1 225840959 . C . PASS END=225840959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 225840960 . C . LowGQ END=225840960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,250:9,0,255:9,0 chr1 225840961 . G . PASS END=225840961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,344:0,33,255:11,0 chr1 225840962 . G . PASS END=225840962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,310:0,3,255:10,0 chr1 225840963 . G . PASS END=225840964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:12,0 chr1 225840965 . G . LowGQ END=225840965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:12:0,0,222:52,0,255:8,0 chr1 225840966 . C . PASS END=225840966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 225840967 . A . PASS END=225840967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 225840968 . C . PASS END=225840968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 225840969 . T . LowGQ END=225840969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,4:12:0:12:0,0,230:44,0,255:8,0 chr1 225840970 . C . PASS END=225840973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 225840974 . C . PASS END=225840974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 225840975 . G . PASS END=225840975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:12,0 chr1 225840976 . C . PASS END=225840976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 225840977 . G . PASS END=225840977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,357:0,5,255:11,0 chr1 225840978 . C . PASS END=225840978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:12,0 chr1 225840979 . C . LowGQ END=225840979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,4:13:0:13:0,0,261:49,0,255:9,0 chr1 225840980 . G . PASS END=225840980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr1 225840981 . G . PASS END=225840981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr1 225840982 . C . LowGQ END=225840982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,327:8,0,255:11,0 chr1 225840983 . G . PASS END=225840983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 225840984 . G . PASS END=225840984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,333:0,6,255:11,0 chr1 225840985 . C . PASS END=225840986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 225840987 . G . PASS END=225840987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 225840988 . G . LowGQ END=225840989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,279:0,0,255:12,0 chr1 225840990 . C . PASS END=225840994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 225840995 . G . LowGQ END=225840995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,294:25,0,255:9,0 chr1 225840996 . C . PASS END=225841008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr1 225841009 . A . PASS END=225841009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,417:0,23,255:12,0 chr1 225841010 . G . PASS END=225841012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 225841013 . A . PASS END=225841022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 225841023 . A . PASS END=225841023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:12,0 chr1 225841024 . G . PASS END=225841027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:15,0 chr1 225841028 . G . PASS END=225841029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 225841030 . G . PASS END=225841040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 225841041 . G . PASS END=225841054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 225841055 . A . PASS END=225841055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr1 225841056 . G . PASS END=225841064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 225841065 . T . PASS END=225841065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 225841066 . T . PASS END=225841066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 225841067 . G . PASS END=225841069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 225841070 . T . PASS END=225841079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 225841080 . G . PASS END=225841109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,385:0,36,255:13,0 chr1 225841110 . G . PASS END=225841119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr1 225841120 . C . PASS END=225841120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 225841121 . C . PASS END=225841124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 225841125 . T . PASS END=225841125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,310:0,3,255:9,0 chr1 225841126 . C . PASS END=225841132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 225841133 . A . LowGQ END=225841133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,363:27,0,255:11,0 chr1 225841134 . A . PASS END=225841138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 225841139 . T . PASS END=225841139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:11,0 chr1 225841140 . C . PASS END=225841141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr1 225841142 . G . LowGQ END=225841142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,366:0,0,255:11,0 chr1 225841143 . G . PASS END=225841145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 225841146 . A . LowGQ END=225841146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,271:39,0,255:9,0 chr1 225841147 . G . PASS END=225841151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 225841152 . C . PASS END=225841153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 225841154 . G . PASS END=225841154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 225841155 . C . PASS END=225841155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr1 225841156 . C . PASS END=225841163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 225841164 . C . PASS END=225841164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 225841165 . T . PASS END=225841182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 225841183 . G . PASS END=225841184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 225841185 . C . PASS END=225841185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 225841186 . C . PASS END=225841191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 225841192 . C . PASS END=225841192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 225841193 . C . PASS END=225841212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 225841213 . C . PASS END=225841214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 225841215 . C . PASS END=225841218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 225841219 . A . PASS END=225841226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:8,0 chr1 225841227 . G . PASS END=225841227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:8,0 chr1 225841228 . G . PASS END=225841230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 225841231 . A . PASS END=225841231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 225841232 . G . PASS END=225841265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr1 225841266 . A . PASS END=225841266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,360:0,8,255:11,0 chr1 225841267 . C . PASS END=225841279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 225841280 . A . PASS END=225841363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,482:0,42,255:19,0 chr1 225841364 . G . PASS END=225841364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 225841365 . T . PASS END=225841376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 225841377 . C . PASS END=225841377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 225841378 . G . PASS END=225841379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 225841380 . G . PASS END=225841380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 225841381 . T . PASS END=225841388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,645:0,51,255:18,0 chr1 225841389 . C . PASS END=225841389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 225841390 . G . PASS END=225841411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 225841412 . C . PASS END=225841418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 225841419 . C . PASS END=225841419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr1 225841420 . G . PASS END=225841421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 225841422 . T . PASS END=225841422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:10,0 chr1 225841423 . C . PASS END=225841425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 225841426 . A . PASS END=225841426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 225841427 . G . PASS END=225841428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 225841429 . A . PASS END=225841429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 225841430 . C . PASS END=225841435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 225841436 . T . PASS END=225841436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 225841437 . G . PASS END=225841446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 225841447 . G . PASS END=225841454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr1 225965643 . A . PASS END=225965714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:18,0 chr1 225971002 . G . PASS END=225971070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,148,255:40,0 chr1 225975673 . G . PASS END=225975681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,131,255:40,0 chr1 225976736 . C . PASS END=225976795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,120,1800:0,125,255:40,0 chr1 225976942 . T . PASS END=225977061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:37:0,93,1395:0,103,255:40,0 chr1 226013355 . C T, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.951;ReadPosRankSum=3.606;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,18,0:0.529,0.000:34:7,9,0:9,9,0:48:85,0,50,644,572,1216:255,0,255:16,0:5.0000e+01,6.6527e-05,5.2750e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,9,9:9,7,10,8 chr1 226016431 . A . PASS END=226016443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:23,0 chr1 226016444 . T . PASS END=226016444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 226016445 . C . PASS END=226016462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:68:23:0,68,817:0,68,255:26,0 chr1 226016463 . G . PASS END=226016482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 226016483 . T . PASS END=226016483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:28,0 chr1 226016484 . C . PASS END=226016492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 226016493 . G . PASS END=226016493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:28,0 chr1 226016494 . G . PASS END=226016544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:32,0 chr1 226016545 . A . PASS END=226016546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 226016547 . G . PASS END=226016587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1017:0,83,255:32,0 chr1 226016588 . T . PASS END=226016588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 226016589 . G . PASS END=226016596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 226016597 . C . PASS END=226016613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:25,0 chr1 226019480 . G . PASS END=226019480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 226019481 . A . PASS END=226019499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1062:0,84,255:36,0 chr1 226019500 . T . PASS END=226019500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 226019501 . A . PASS END=226019503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:37,0 chr1 226019504 . T . PASS END=226019504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr1 226019505 . T . PASS END=226019595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:98:38:0,98,1442:0,98,255:40,0 chr1 226019596 . A . PASS END=226019632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,105,1575:0,123,255:40,0 chr1 226019633 . T C, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.451;ReadPosRankSum=2.575;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,22,0:0.537,0.000:41:7,8,0:12,14,0:48:85,0,50,758,671,1429:255,0,255:16,0:5.0000e+01,6.7304e-05,5.2596e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,7,15:11,8,15,7 chr1 226019634 . A . PASS END=226019660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1213:0,84,255:37,0 chr1 226026355 . G . PASS END=226026382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr1 226026383 . G . PASS END=226026383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,1 chr1 226026384 . C . LowGQ END=226026384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:17,0 chr1 226026385 . C . PASS END=226026386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 226026387 . C . PASS END=226026391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,799:0,63,255:22,0 chr1 226026392 . G . PASS END=226026392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 226026393 . C . PASS END=226026428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,829:0,62,255:26,0 chr1 226026429 . G . PASS END=226026449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:32,0 chr1 226026450 . T . PASS END=226026450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:29,0 chr1 226026451 . T . PASS END=226026458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:32,0 chr1 226026459 . T . PASS END=226026459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1053:0,27,255:30,0 chr1 226026460 . T . PASS END=226026460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:30,0 chr1 226026461 . T . PASS END=226026472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1173:0,83,255:33,0 chr1 226026473 . C . PASS END=226026473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:31,0 chr1 226026474 . C . PASS END=226026475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 226026476 . A . PASS END=226026476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1255:0,56,255:32,0 chr1 226026477 . C . PASS END=226026556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1023:0,81,255:36,0 chr1 226026557 . C . PASS END=226026559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,80,255:26,0 chr1 226026560 . C . PASS END=226026563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226026564 . G . PASS END=226026575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr1 226026576 . A . PASS END=226026578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 226026579 . A . PASS END=226026582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:19,0 chr1 226026918 . G . PASS END=226026923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr1 226026924 . A . PASS END=226026940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,860:0,66,255:23,0 chr1 226026941 . A . PASS END=226026941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 226026942 . G . PASS END=226026955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:26,0 chr1 226026956 . C . PASS END=226026956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 226026957 . T . PASS END=226026964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 226026965 . C . PASS END=226026989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr1 226026990 . T . PASS END=226026990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,886:0,54,255:26,0 chr1 226026991 . T . PASS END=226026996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 226026997 . A . PASS END=226027020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:26:0,62,930:0,62,255:26,0 chr1 226027021 . C . PASS END=226027023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:22,0 chr1 226027024 . T . PASS END=226027025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:19,0 chr1 226027026 . A . PASS END=226027026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 226027027 . T . PASS END=226027028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr1 226027029 . T . PASS END=226027029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 226027030 . G . PASS END=226027030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr1 226027031 . G . PASS END=226027032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 226027033 . C . PASS END=226027033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:19,0 chr1 226027034 . C . PASS END=226027034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 226027035 . A . PASS END=226027037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226027038 . T . PASS END=226027047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr1 226027530 . C . PASS END=226027549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:34,0 chr1 226027550 . T . PASS END=226027550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:32,0 chr1 226027551 . G . PASS END=226027715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1235:0,91,255:40,0 chr1 226027716 . G . PASS END=226027732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,68,255:26,0 chr1 226027733 . C . PASS END=226027738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr1 226030067 . G . PASS END=226030175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:28:0,80,1041:0,80,255:40,0 chr1 226032199 . G . PASS END=226032324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:36:0,83,1335:0,83,255:40,0 chr1 226032847 . G . PASS END=226032850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr1 226032851 . A . PASS END=226032851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:30,0 chr1 226032852 . A . PASS END=226032996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:33:0,92,1202:0,92,255:40,0 chr1 226032997 . G . PASS END=226033047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:39:0,90,1350:0,117,255:40,0 chr1 226033048 . A . PASS END=226033048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1216:0,51,255:29,0 chr1 226034741 . T . PASS END=226034741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 226034742 . C . PASS END=226034742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 226034743 . A . PASS END=226034748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr1 226034749 . C . PASS END=226034749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 226034750 . C . PASS END=226034765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr1 226034766 . A . PASS END=226034767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 226034768 . A . PASS END=226034774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr1 226034775 . G . PASS END=226034775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226034776 . T . PASS END=226034777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 226034778 . G . PASS END=226034778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 226034779 . C . PASS END=226034784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 226034785 . G . PASS END=226034796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 226034797 . G . PASS END=226034838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1194:0,83,255:35,0 chr1 226034839 . T . PASS END=226034839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:30,2 chr1 226034840 . C . PASS END=226034842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1148:0,36,255:30,2 chr1 226034843 . C . PASS END=226034843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr1 226034844 . T . PASS END=226034845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 226034846 . C . PASS END=226034846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:31,0 chr1 226034847 . T . PASS END=226034865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1067:0,80,255:31,0 chr1 226034866 . G . PASS END=226034866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 226034867 . T . PASS END=226034882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 226034883 . G . PASS END=226034902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr1 226034903 . A . PASS END=226034904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:54:26:0,54,810:0,62,255:18,0 chr1 226034905 . G . PASS END=226034908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 226034909 . G . PASS END=226034914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 226036193 . T . PASS END=226036200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,566:0,40,255:19,0 chr1 226036201 . G . PASS END=226036205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 226036206 . G . PASS END=226036207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 226036208 . C . PASS END=226036208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 226036209 . A . PASS END=226036209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 226036210 . T . PASS END=226036219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,901:0,72,255:25,0 chr1 226036220 . T . PASS END=226036220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 226036221 . G . PASS END=226036237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 226036238 . A . PASS END=226036238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 226036239 . C . PASS END=226036248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 226036249 . C . PASS END=226036249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 226036250 . T . PASS END=226036254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:25,0 chr1 226036255 . T . PASS END=226036255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:23,0 chr1 226036598 . T . PASS END=226036610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,748:0,69,255:26,0 chr1 226036611 . G . PASS END=226036683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:83:30:0,83,1156:0,83,255:40,0 chr1 226036684 . A . PASS END=226036684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1369:0,73,255:39,0 chr1 226036685 . G . PASS END=226036713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1279:0,84,255:40,0 chr1 226037613 . C . PASS END=226037613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr1 226037614 . C . PASS END=226037614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 226037615 . A . PASS END=226037621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 226037622 . G . PASS END=226037622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 226037623 . G . PASS END=226037635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,862:0,69,255:26,0 chr1 226037636 . T . PASS END=226037636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,787:0,25,255:25,0 chr1 226037637 . A . PASS END=226037638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 226037639 . A . PASS END=226037639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 226037640 . G . PASS END=226037640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,870:0,50,255:25,0 chr1 226037641 . C . PASS END=226037655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,77,255:29,0 chr1 226037656 . G . PASS END=226037657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 226037658 . T . PASS END=226037658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:29,0 chr1 226037659 . G . PASS END=226037659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 226037660 . G . PASS END=226037663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 226037664 . C . PASS END=226037664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 226037665 . T . PASS END=226037682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:31,0 chr1 226037683 . A . PASS END=226037683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:28,0 chr1 226037684 . G . PASS END=226037697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:32,0 chr1 226037698 . C . PASS END=226037698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:30,0 chr1 226037699 . C . PASS END=226037699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 226037700 . C . PASS END=226037700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:29,0 chr1 226037701 . C . PASS END=226037713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr1 226037714 . G . PASS END=226037714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 226037715 . C . PASS END=226037716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 226037717 . G . PASS END=226037717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 226037718 . G . PASS END=226037720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 226037721 . G . PASS END=226037721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr1 226037722 . G . PASS END=226037726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 226037727 . C . PASS END=226037774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,856:0,61,255:25,0 chr1 226037775 . T . PASS END=226037780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr1 226040365 . C . PASS END=226040366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr1 226040367 . A . PASS END=226040403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:92:32:0,92,1127:0,92,255:37,0 chr1 226040404 . C T, 49.47 PASS DP=37;MQ=250.00;MQRankSum=5.166;ReadPosRankSum=4.312;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,17,0:0.459,0.000:37:11,9,0:9,8,0:48:84,0,50,608,715,1323:255,0,255:20,0:4.9473e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,6,9,8:9,11,9,8 chr1 226040405 . G . PASS END=226040421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1364:0,98,255:37,0 chr1 226040422 . A . PASS END=226040422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 226040423 . C . PASS END=226040441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:34:0,93,1355:0,95,255:35,0 chr1 226040442 . G . PASS END=226040459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1172:0,93,255:34,0 chr1 226040460 . A . PASS END=226040460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 226040461 . A . PASS END=226040465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 226040466 . T . PASS END=226040466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:24,0 chr1 226040467 . G . PASS END=226040470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 226041330 . C . PASS END=226041336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226041337 . A . PASS END=226041337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226041338 . C . PASS END=226041339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226041340 . T . PASS END=226041357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr1 226041358 . G . PASS END=226041369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,792:0,66,255:24,0 chr1 226041370 . A . PASS END=226041370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 226041371 . T . PASS END=226041381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:25,0 chr1 226041382 . G . PASS END=226041462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1074:0,90,255:33,0 chr1 226041463 . A . PASS END=226041463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:28,0 chr1 226041464 . A . PASS END=226041470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 226041471 . C . PASS END=226041471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 226041472 . T . PASS END=226041475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 226041476 . C . PASS END=226041489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 226041490 . C . PASS END=226041492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 226043579 . T . PASS END=226043641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:62:0,120,1800:0,136,255:40,0 chr1 226044353 . C . PASS END=226044365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1163:0,80,255:33,0 chr1 226044366 . G . PASS END=226044366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr1 226044367 . G . PASS END=226044439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1333:0,87,255:40,0 chr1 226044611 . T . PASS END=226044615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr1 226044616 . C . PASS END=226044619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 226044620 . T . PASS END=226044620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 226044621 . G . PASS END=226044624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 226044625 . C . PASS END=226044630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 226044631 . C . PASS END=226044632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 226044633 . G . PASS END=226044640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 226044641 . T . PASS END=226044649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1070:0,87,255:29,0 chr1 226044650 . A . PASS END=226044650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 226044651 . T . PASS END=226044653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr1 226044654 . A . PASS END=226044654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 226044655 . G . PASS END=226044669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 226044670 . G . PASS END=226044670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 226044671 . A . PASS END=226044671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 226044672 . A . PASS END=226044672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 226044673 . G . PASS END=226044674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 226044675 . A . PASS END=226044675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 226044676 . C . PASS END=226044676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 226044677 . C . PASS END=226044679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1131:0,77,255:26,0 chr1 226044680 . A . PASS END=226044682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 226044683 . A . PASS END=226044686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 226044687 . G . PASS END=226044692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226044693 . G . PASS END=226044693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 226044694 . G . PASS END=226044711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr1 226044712 . C . PASS END=226044717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 226046896 . A . PASS END=226047032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:39:0,81,1215:0,93,255:40,1 chr1 226047033 . G . PASS END=226047049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:27:0,72,1080:0,81,255:26,0 chr1 226048556 . T . PASS END=226048557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 226048558 . A . PASS END=226048558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1434:0,76,255:38,0 chr1 226048559 . C . PASS END=226048633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1305:0,81,255:40,0 chr1 226048634 . C . PASS END=226048634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr1 226048635 . G . PASS END=226048643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr1 226048644 . T . PASS END=226048668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 226048669 . A . PASS END=226048669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 226048670 . C . PASS END=226048675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 226048676 . G . PASS END=226048686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 226048687 . C . PASS END=226048695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 226048696 . T . PASS END=226048696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 226048697 . G . PASS END=226048697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 226049918 . T . PASS END=226049918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 226049919 . A . PASS END=226050020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1072:0,80,255:38,0 chr1 226050021 . T . PASS END=226050021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:29,0 chr1 226050022 . C . PASS END=226050035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,92,255:31,0 chr1 226050036 . A . PASS END=226050051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,939:0,67,255:25,0 chr1 226050155 . C . PASS END=226050173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 226050174 . T . PASS END=226050175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 226050176 . A . PASS END=226050188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr1 226050189 . T . PASS END=226050189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 226050190 . G . PASS END=226050190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 226050191 . G . PASS END=226050191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:28,0 chr1 226050192 . C . PASS END=226050260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1049:0,80,255:33,0 chr1 226050261 . C . PASS END=226050267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:25,0 chr1 226050268 . C . PASS END=226050268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:21,0 chr1 226050269 . A . PASS END=226050274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:25:0,63,945:0,65,255:22,0 chr1 226050275 . C . PASS END=226050275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 226050276 . T . PASS END=226050278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 226050471 . T . PASS END=226050477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1299:0,95,255:38,0 chr1 226050478 . T . PASS END=226050478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:35,0 chr1 226050479 . G . PASS END=226050537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1261:0,100,255:40,0 chr1 226050538 . T . PASS END=226050551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:25:0,63,945:0,72,255:26,0 chr1 226053597 . C . PASS END=226053604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,901:0,72,255:26,0 chr1 226053605 . G . PASS END=226053606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 226053607 . T . PASS END=226053607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 226053608 . C . PASS END=226053650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1086:0,86,255:31,0 chr1 226053651 . A . PASS END=226053651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 226053652 . A . PASS END=226053667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 226054274 . C . PASS END=226054405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,104,1451:0,104,255:40,0 chr1 226054812 . T . PASS END=226054863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,131,255:40,0 chr1 226055588 . C . PASS END=226055708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1133:0,80,255:40,0 chr1 226055709 . C . PASS END=226055717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:32:0,75,1125:0,96,255:26,0 chr1 226055718 . G . PASS END=226055718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:25,0 chr1 226055719 . A . PASS END=226055719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226055720 . T . PASS END=226055730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:24,0 chr1 226058776 . T . PASS END=226058778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226058779 . A . PASS END=226058779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 226058780 . G . PASS END=226058785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226058786 . A . PASS END=226058786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 226058787 . G . PASS END=226058800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 226058801 . A . PASS END=226058813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr1 226059687 . C . PASS END=226059737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:53:0,109,1800:0,109,255:40,0 chr1 226059738 . C . PASS END=226059738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:77:55:0,77,1835:0,77,255:40,0 chr1 226059739 . T . PASS END=226059745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:96:55:0,96,1800:0,96,255:40,0 chr1 226059746 . T . PASS END=226059753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,107,1620:0,107,255:40,0 chr1 226061988 . C . PASS END=226062067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:41:0,87,1422:0,87,255:40,0 chr1 226065095 . C . PASS END=226065105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:18,0 chr1 226065106 . T . PASS END=226065106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 226065107 . G . PASS END=226065110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr1 226065111 . T . PASS END=226065112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 226065113 . T . PASS END=226065113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 226065114 . A . PASS END=226065135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:25,0 chr1 226065136 . C . PASS END=226065141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr1 226065142 . A . PASS END=226065142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 226065143 . G . PASS END=226065144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 226065145 . T . PASS END=226065145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 226065146 . G . PASS END=226065154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:29,0 chr1 226065155 . G . PASS END=226065155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 226065156 . A . PASS END=226065156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 226065157 . G . PASS END=226065157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 226065158 . C . PASS END=226065172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr1 226065173 . G . PASS END=226065173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 226065174 . G . PASS END=226065213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1078:0,87,255:31,0 chr1 226065214 . G . PASS END=226065215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr1 226065216 . C . PASS END=226065219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 226065220 . G . PASS END=226065220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 226065221 . C . PASS END=226065226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1133:0,93,255:31,0 chr1 226065227 . C . PASS END=226065245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:26:0,60,900:0,62,255:26,0 chr1 226065246 . G . PASS END=226065246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 226065247 . A . PASS END=226065253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,855:0,45,255:19,0 chr1 226065254 . C . PASS END=226065258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226065259 . C . PASS END=226065264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 226065265 . A . PASS END=226065265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,607:0,21,255:18,0 chr1 226065266 . C . PASS END=226065280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 226074427 . C . PASS END=226074429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr1 226074430 . T . PASS END=226074430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:30,0 chr1 226074431 . G . PASS END=226074438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1241:0,96,255:33,0 chr1 226074439 . C . PASS END=226074439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 226074440 . C . PASS END=226074466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1302:0,92,255:36,0 chr1 226074467 . G . PASS END=226074467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1230:0,39,255:32,0 chr1 226074468 . C . PASS END=226074491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1341:0,95,255:37,0 chr1 226074492 . T . PASS END=226074492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr1 226074493 . G . PASS END=226074514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,94,255:35,0 chr1 226074515 . G . PASS END=226074517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 226074518 . C . PASS END=226074525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 226074526 . G . PASS END=226074533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:30,0 chr1 226074534 . C . PASS END=226074534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr1 226074535 . C . PASS END=226074549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 226074550 . C . PASS END=226074562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,71,255:25,0 chr1 226074563 . T G, 47.76 PASS DP=26;MQ=125.88;MQRankSum=-1.517;ReadPosRankSum=1.106;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:6,6,0:8,6,0:46:83,0,49,429,492,922:255,0,255:13,0:4.7764e+01,1.0096e-04,5.1850e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,3,9:9,5,3,9 chr1 226074564 . C . PASS END=226074564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 226074565 . A . PASS END=226074565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 226074566 . G . PASS END=226074594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,930:0,72,255:25,0 chr1 226074595 . C . PASS END=226074595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 226074596 . A . PASS END=226074600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 226074601 . C . PASS END=226074616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 226074617 . A . PASS END=226074617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:18,0 chr1 226074618 . G . PASS END=226074618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 226074619 . G . PASS END=226074619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr1 226074620 . G . PASS END=226074643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 226074644 . C . PASS END=226074648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 226074649 . A . PASS END=226074649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 226074650 . C . PASS END=226074655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 226074656 . T . PASS END=226074675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:26,0 chr1 226074676 . C . PASS END=226074684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 226074685 . C . PASS END=226074687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 226074688 . G . PASS END=226074692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr1 226074693 . C T, 48.17 PASS DP=28;MQ=109.22;MQRankSum=-0.412;ReadPosRankSum=3.276;FractionInformativeReads=0.964;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,13,0:0.481,0.000:27:8,6,0:6,7,0:46:83,0,48,457,501,958:255,0,255:13,0:4.8170e+01,9.9921e-05,5.1100e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,10,3:6,8,7,6 chr1 226074694 . G . PASS END=226074694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226074695 . G . PASS END=226074698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 226074699 . A . PASS END=226074707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 226074708 . C . PASS END=226074715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 226074716 . T . PASS END=226074720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 226074721 . G . PASS END=226074721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 226074722 . T . PASS END=226074724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 226074725 . A . PASS END=226074730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,903:0,67,255:25,0 chr1 226074731 . T . PASS END=226074733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 226074734 . C . PASS END=226074757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:29,0 chr1 226074758 . A . PASS END=226074758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 226074759 . T . PASS END=226074759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 226074760 . T . PASS END=226074762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 226074763 . T . PASS END=226074768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 226074769 . A . PASS END=226074787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:25:0,65,992:0,65,255:25,0 chr1 226074788 . G . PASS END=226074788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 226074789 . C . PASS END=226074790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 226075099 . C . PASS END=226075116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,645:0,51,255:19,0 chr1 226075117 . A . PASS END=226075117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 226075118 . G . PASS END=226075118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 226075119 . G . PASS END=226075120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 226075121 . T . PASS END=226075146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr1 226075147 . A . PASS END=226075148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 226075149 . C . PASS END=226075168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,682:0,54,255:19,0 chr1 226075169 . A . PASS END=226075170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 226075171 . G . PASS END=226075229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,675:0,41,255:19,0 chr1 226075230 . C . PASS END=226075230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr1 226075231 . G . PASS END=226075240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr1 226075241 . G . PASS END=226075241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 226075242 . C . PASS END=226075338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr1 226075486 . C . PASS END=226075492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,576:0,51,255:19,0 chr1 226075493 . C . PASS END=226075505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,677:0,60,255:25,0 chr1 226075506 . G . PASS END=226075507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 226075508 . G . PASS END=226075528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr1 226075529 . C . PASS END=226075529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 226075530 . G . PASS END=226075530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 226075531 . C . PASS END=226075575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,995:0,81,255:31,0 chr1 226075576 . A . PASS END=226075576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 226075577 . G . PASS END=226075686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1210:0,83,255:35,0 chr1 226075687 . A . PASS END=226075691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 226075692 . G . PASS END=226075693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226075694 . G . PASS END=226075705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:25:0,71,1047:0,71,255:25,0 chr1 226075706 . C . PASS END=226075706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 226075707 . C . PASS END=226075721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:22,0 chr1 226075722 . G . PASS END=226075732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 226076517 . C . PASS END=226076536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 226076537 . C . PASS END=226076538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 226076539 . C . PASS END=226076539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 226076540 . T . PASS END=226076540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 226076541 . T . PASS END=226076543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 226076544 . C . LowGQ END=226076544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 226076545 . G . PASS END=226076559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 226076560 . G . PASS END=226076562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 226076563 . G . PASS END=226076618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 226076619 . C . PASS END=226076620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 226076621 . T . PASS END=226076625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 226076626 . G . PASS END=226076626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 226076627 . T . PASS END=226076638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 226076639 . A . PASS END=226076650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 226076651 . T . PASS END=226076699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr1 226076700 . T . PASS END=226076758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 226076759 . G . PASS END=226076766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 226108155 . T . PASS END=226108160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 226108161 . C . PASS END=226108162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226108163 . T . PASS END=226108165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 226108166 . T . PASS END=226108170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226108171 . C . PASS END=226108191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:16,0 chr1 226108192 . A . PASS END=226108192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 226108193 . G . PASS END=226108197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr1 226108198 . T . PASS END=226108198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 226108199 . T . PASS END=226108199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 226108200 . C T, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.510;ReadPosRankSum=1.288;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,10,0:0.556,0.000:18:4,5,0:4,5,0:48:85,0,50,358,281,639:255,0,255:7,0:5.0000e+01,6.7822e-05,5.2516e+01,3.5761e+02,3.1587e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,7,3:5,3,2,8 chr1 226108201 . C . PASS END=226108217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr1 226108218 . C . PASS END=226108237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr1 226108238 . A . PASS END=226108245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,947:0,72,255:26,0 chr1 226108246 . T . PASS END=226108248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 226108249 . A . PASS END=226108249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 226108250 . C . PASS END=226108251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 226108252 . C . PASS END=226108253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 226108254 . G . PASS END=226108256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 226108257 . T . PASS END=226108257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 226108258 . A . PASS END=226108258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,961:0,40,255:25,0 chr1 226108259 . A . PASS END=226108261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 226108262 . G . PASS END=226108262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr1 226108263 . G . PASS END=226108267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 226108268 . T . PASS END=226108269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 226108270 . T . PASS END=226108271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 226108272 . A . PASS END=226108272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 226108273 . A . PASS END=226108278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr1 226108279 . G . PASS END=226108280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,992:0,68,255:26,0 chr1 226108281 . T . PASS END=226108283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226108284 . G . PASS END=226108289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 226108290 . C . PASS END=226108292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226108293 . T . PASS END=226108309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:26,0 chr1 226108310 . A . PASS END=226108310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 226108311 . C . PASS END=226108318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,67,255:20,0 chr1 226108319 . C . PASS END=226108320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 226108908 . C . PASS END=226108918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,847:0,66,255:24,0 chr1 226108919 . A . PASS END=226108919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 226108920 . C . PASS END=226108920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 226108921 . A . PASS END=226108922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr1 226108923 . G . PASS END=226108931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,902:0,75,255:25,0 chr1 226108932 . A . PASS END=226108933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 226108934 . T . PASS END=226108940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,937:0,62,255:26,0 chr1 226108941 . A . PASS END=226108950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 226108951 . A . PASS END=226108989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr1 226108990 . T . PASS END=226108990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 226108991 . G . PASS END=226109003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 226109004 . G . PASS END=226109004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr1 226109005 . G . PASS END=226109005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 226109006 . G . PASS END=226109026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,53,255:19,0 chr1 226109027 . C . PASS END=226109036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 226109037 . T . PASS END=226109037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 226109038 . G . PASS END=226109052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 226109053 . G . PASS END=226109053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 226109054 . C . PASS END=226109071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 226109252 . C . PASS END=226109257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 226109258 . A . PASS END=226109258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226109259 . G . PASS END=226109259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 226109260 . C . PASS END=226109265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 226109266 . C . PASS END=226109269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 226109270 . G . PASS END=226109272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 226109273 . T . PASS END=226109276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 226109277 . A . PASS END=226109283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 226109284 . G . PASS END=226109284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 226109285 . G . PASS END=226109326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1156:0,92,255:35,0 chr1 226109327 . G . PASS END=226109327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr1 226109328 . T . PASS END=226109328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 226109329 . C . PASS END=226109329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr1 226109330 . C . PASS END=226109344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:32,0 chr1 226109556 . A . PASS END=226109556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 226109558 . A . PASS END=226109572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,360:0,30,255:13,0 chr1 226109573 . G . PASS END=226109573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 226109574 . C . PASS END=226109603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 226109604 . T . PASS END=226109604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 226109605 . C . PASS END=226109606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 226109607 . T . PASS END=226109607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:14,0 chr1 226109608 . C . PASS END=226109659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:19,0 chr1 226109660 . C . PASS END=226109666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 226109667 . T . PASS END=226109667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 226109668 . C . PASS END=226109668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 226109669 . C . PASS END=226109674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 226109675 . G . PASS END=226109675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:17,0 chr1 226109676 . G . PASS END=226109721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,598:0,44,255:19,0 chr1 226109722 . C . PASS END=226109736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,474:0,31,255:13,0 chr1 226109737 . T . PASS END=226109737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 226109738 . G . PASS END=226109740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 226109741 . G . PASS END=226109750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 226109751 . T . PASS END=226109754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226109755 . G . PASS END=226109765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr1 226109766 . A . PASS END=226109774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226109775 . A . PASS END=226109775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:8,0 chr1 226109776 . G . PASS END=226109780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 226109904 . C . PASS END=226109905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 226109906 . T . PASS END=226109930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:31,0 chr1 226109931 . A . PASS END=226109931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 226109932 . G . PASS END=226110034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1148:0,80,255:40,0 chr1 226110035 . T . PASS END=226110081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 226110082 . T . PASS END=226110082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 226110083 . T . PASS END=226110083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 226110085 . T . PASS END=226110085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 226111400 . C . PASS END=226111467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1196:0,85,255:34,0 chr1 226111468 . A . PASS END=226111468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 226111469 . T . PASS END=226111471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 226111744 . C . PASS END=226111751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr1 226111752 . G . PASS END=226111752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr1 226111753 . T . PASS END=226111754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226111755 . A . PASS END=226111780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,946:0,67,255:26,0 chr1 226111781 . C . PASS END=226111784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 226111785 . C . PASS END=226111810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 226124411 . A . PASS END=226124411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 226124570 . G . PASS END=226124570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 226124844 . T . PASS END=226124844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 226124862 . C . PASS END=226124862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 226124881 . G . PASS END=226124881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 226124991 . A . PASS END=226124991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1297:0,108,255:36,0 chr1 226125077 . A . PASS END=226125077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 226125105 . C . PASS END=226125105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 226125141 . C . PASS END=226125494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:40:0,87,1305:0,88,255:40,0 chr1 226125495 . G . PASS END=226125495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:78:46:0,78,1170:0,108,255:25,0 chr1 226125496 . C . PASS END=226125497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:46:0,81,1215:0,138,255:27,0 chr1 226125498 . C . PASS END=226125500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:45:0,78,1170:0,100,255:26,0 chr1 226125501 . A . PASS END=226125504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:66:44:0,66,990:0,101,255:25,0 chr1 226125513 . G . PASS END=226125513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:42:47:0,42,630:0,141,255:14,0 chr1 226125615 . C . PASS END=226125660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:72:0,120,1800:0,189,255:40,0 chr1 226127061 . C . PASS END=226127066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,568:0,51,255:17,0 chr1 226127067 . T . PASS END=226127067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 226127068 . C . PASS END=226127070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 226127071 . T . PASS END=226127071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:14,0 chr1 226127072 . G . PASS END=226127076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 226127077 . C . PASS END=226127077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 226127078 . C . PASS END=226127084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 226127085 . T . PASS END=226127085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 226127086 . G . PASS END=226127103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,639:0,54,255:19,0 chr1 226127104 . C . PASS END=226127109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr1 226127110 . G . PASS END=226127110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 226127111 . C . PASS END=226127116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 226127117 . T . PASS END=226127117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 226127118 . G . PASS END=226127126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 226127127 . T . PASS END=226127127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 226127128 . G . PASS END=226127130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226127131 . A . PASS END=226127134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:19,0 chr1 226127135 . A . PASS END=226127135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,662:0,32,255:18,0 chr1 226127136 . A . PASS END=226127152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,550:0,40,255:18,0 chr1 226127153 . G . PASS END=226127153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr1 226127154 . G . PASS END=226127160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 226127161 . A . PASS END=226127161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,603:0,38,255:14,0 chr1 226127162 . C . PASS END=226127174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 226127175 . A . PASS END=226127190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:15:0,32,495:0,32,255:13,0 chr1 226127191 . C . PASS END=226127199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 226127200 . G . PASS END=226127200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 226127201 . T . PASS END=226127206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 226127207 . C . PASS END=226127207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 226127208 . A . PASS END=226127210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr1 226127211 . G . PASS END=226127211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,561:0,23,255:17,0 chr1 226127212 . G . PASS END=226127212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 226127213 . C . PASS END=226127213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 226127214 . T . PASS END=226127250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,568:0,40,255:18,0 chr1 226127251 . C . PASS END=226127251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 226127252 . C . PASS END=226127252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 226127253 . T . PASS END=226127253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 226127254 . C . PASS END=226127264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 226127265 . A . PASS END=226127265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 226127266 . A . PASS END=226127280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 226127281 . T . PASS END=226127281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr1 226127282 . C . PASS END=226127286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 226127287 . G . PASS END=226127287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226127288 . G . PASS END=226127298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr1 226127299 . G . PASS END=226127299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 226127300 . C . PASS END=226127300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 226127456 . C . PASS END=226127479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,529:0,45,255:19,0 chr1 226127480 . T . PASS END=226127480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226127481 . T . PASS END=226127481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 226127482 . G . PASS END=226127483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 226127484 . A . PASS END=226127487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 226127488 . G . PASS END=226127488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226127489 . T . PASS END=226127503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,623:0,43,255:19,0 chr1 226127504 . A . PASS END=226127504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 226127505 . G . PASS END=226127505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 226127506 . C . PASS END=226127507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226127508 . A . PASS END=226127508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 226127509 . C . PASS END=226127509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 226127510 . T . PASS END=226127512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 226127513 . A . PASS END=226127514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 226127515 . G . PASS END=226127515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:20,0 chr1 226127516 . G . PASS END=226127517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 226127518 . C . PASS END=226127518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 226127519 . A . PASS END=226127519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:23,0 chr1 226127520 . C . PASS END=226127522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr1 226127523 . G . PASS END=226127523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 226127524 . G . PASS END=226127524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:25,0 chr1 226127525 . G . PASS END=226127525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 226127526 . C . PASS END=226127527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:28,0 chr1 226127528 . T . PASS END=226127528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1066:0,68,255:29,0 chr1 226127529 . G . PASS END=226127534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1141:0,82,255:29,0 chr1 226127535 . T . PASS END=226127535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1039:0,46,255:25,0 chr1 226127536 . G . PASS END=226127540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 226127541 . G . PASS END=226127541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 226127542 . G . PASS END=226127544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:29,0 chr1 226127545 . C . PASS END=226127551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 226127552 . C . PASS END=226127552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 226127553 . C . PASS END=226127663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1111:0,82,255:40,0 chr1 226127664 . G . PASS END=226127697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,986:0,78,255:26,0 chr1 226127698 . C . PASS END=226127698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:20,0 chr1 226127699 . A . PASS END=226127702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 226128591 . C . PASS END=226128615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 226128616 . T . PASS END=226128616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 226128617 . C . PASS END=226128642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 226128643 . C . PASS END=226128669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:19,0 chr1 226128670 . C . PASS END=226128675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 226128676 . G . PASS END=226128687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 226128688 . C . PASS END=226128742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,790:0,63,255:23,0 chr1 226128743 . C . PASS END=226128743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 226128744 . G . PASS END=226128764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 226128765 . G . PASS END=226128765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr1 226128766 . C . PASS END=226128767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226128768 . C . PASS END=226128783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:19,0 chr1 226128784 . C . PASS END=226128784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 226128785 . C . PASS END=226128799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 226128800 . G . PASS END=226128800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 226128801 . G . PASS END=226128801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 226128802 . C . PASS END=226128803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 226128804 . G . PASS END=226128805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 226128806 . A . PASS END=226128829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,418:0,33,255:13,0 chr1 226128830 . A . PASS END=226128833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 226128834 . G . PASS END=226128834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 226128835 . C . PASS END=226128838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr1 226128839 . A . PASS END=226128840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:17:11:0,17,270:0,17,255:6,0 chr1 226128842 . G . PASS END=226128842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 226129062 . G . PASS END=226129062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 226129065 . G . PASS END=226129065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 226173003 . T . PASS END=226173018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,631:0,40,255:19,0 chr1 226173019 . T . PASS END=226173026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 226173027 . C . PASS END=226173027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 226173028 . T . PASS END=226173036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:22:0,61,837:0,61,255:26,0 chr1 226173037 . A . PASS END=226173042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 226173043 . G . PASS END=226173043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 226173044 . G . PASS END=226173047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr1 226173048 . A . PASS END=226173048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 226173049 . A . PASS END=226173214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:31:0,87,1136:0,93,255:40,0 chr1 226173215 . T . PASS END=226173224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,77,255:26,0 chr1 226175597 . T . PASS END=226176065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:35:0,80,1215:0,80,255:40,0 chr1 226176066 . G . PASS END=226176071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,73,255:21,0 chr1 226176072 . A . PASS END=226176089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 226178944 . C . PASS END=226179064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:30:0,90,1139:0,90,255:40,0 chr1 226180099 . C . PASS END=226180110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr1 226180111 . A . PASS END=226180111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 226180112 . A . PASS END=226180127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr1 226180128 . G . PASS END=226180128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 226180129 . C . PASS END=226180131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226180132 . T . PASS END=226180147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:16,0 chr1 226180148 . C . PASS END=226180148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 226180149 . T . PASS END=226180192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,590:0,48,255:18,0 chr1 226180193 . C . PASS END=226180193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 226180194 . C . PASS END=226180232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,637:0,41,255:19,0 chr1 226180233 . T . PASS END=226180233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 226180234 . C . PASS END=226180253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:16,0 chr1 226180254 . A . PASS END=226180260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 226180261 . C . PASS END=226180261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 226180262 . A . PASS END=226180268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,443:0,39,255:13,0 chr1 226180592 . G . PASS END=226180592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 226180593 . C . PASS END=226180607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:65:23:0,65,801:0,65,255:25,0 chr1 226180608 . C . PASS END=226180617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,970:0,81,255:34,0 chr1 226180618 . T . PASS END=226180618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr1 226180619 . C . PASS END=226180628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:35:0,94,1260:0,94,255:37,0 chr1 226180629 . T . PASS END=226180629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,960:0,44,255:33,0 chr1 226180630 . G . PASS END=226180701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,94,255:40,0 chr1 226180702 . A . PASS END=226180703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1103:0,79,255:26,0 chr1 226182967 . C . PASS END=226182975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1341:0,95,255:38,0 chr1 226182976 . C . PASS END=226182976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:36,0 chr1 226182977 . A . PASS END=226183084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:36:0,84,1271:0,84,255:40,0 chr1 226186894 . C . PASS END=226186899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 226186900 . T . PASS END=226186900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 226186901 . T . PASS END=226186936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:25,0 chr1 226186937 . C . PASS END=226186937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 226186938 . G . PASS END=226186962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 226186963 . G . PASS END=226186963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 226186964 . C . PASS END=226186999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr1 226187000 . G . PASS END=226187013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:19,0 chr1 226252053 . A . PASS END=226252059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr1 226252060 . G . PASS END=226252170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,685:0,66,255:26,0 chr1 226252171 . A . PASS END=226252171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 226252172 . T . PASS END=226252179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 226252180 . G . PASS END=226252180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 226253357 . G . PASS END=226253357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 226253358 . C . PASS END=226253358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 226253359 . C . PASS END=226253361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 226253362 . G . PASS END=226253364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 226253365 . C . PASS END=226253365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr1 226253366 . T . PASS END=226253366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 226253367 . G . PASS END=226253600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:84:28:0,84,1033:0,84,255:40,0 chr1 226259052 . G . PASS END=226259065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,645:0,51,255:19,0 chr1 226259066 . C . PASS END=226259072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 226259073 . G . PASS END=226259075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 226259076 . G . PASS END=226259085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 226259086 . A . PASS END=226259092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,752:0,63,255:21,0 chr1 226259093 . C . PASS END=226259095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 226259096 . C . PASS END=226259098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 226259099 . G . PASS END=226259101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr1 226259102 . T . PASS END=226259102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 226259103 . G . PASS END=226259105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 226259106 . A . PASS END=226259112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr1 226259113 . C G, 0.01 DRAGENSnpHardQUAL DP=23;MQ=137.18;MQRankSum=-1.691;ReadPosRankSum=0.709;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:21,2,0:0.087,0.000:23:7,1,0:14,1,0:29:6,0,50,72,751,822:8,0,255:19,0:5.8197e-03,2.8732e+01,8.1732e+01,1.0026e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,9,1,1:10,11,2,0 chr1 226259114 . C . PASS END=226259114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 226259115 . A . PASS END=226259116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr1 226259117 . A . PASS END=226259122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 226259123 . A . PASS END=226259133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 226259134 . C . PASS END=226259134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 226259135 . A . PASS END=226259150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr1 226259151 . G . PASS END=226259158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,592:0,40,255:15,0 chr1 226259159 . C . PASS END=226259159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:12,0 chr1 226259160 . A . PASS END=226259167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 226259168 . A . PASS END=226259169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 226259170 . A . PASS END=226259171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 226259172 . C . PASS END=226259172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr1 226259173 . G . PASS END=226259173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 226259174 . T . PASS END=226259180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226334311 . T . PASS END=226334311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 226334312 . T . PASS END=226334312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 226334313 . A . PASS END=226334315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 226334316 . T . PASS END=226334317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 226334318 . G . PASS END=226334319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 226334320 . A . PASS END=226334321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 226334322 . A . PASS END=226334322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 226334323 . A . PASS END=226334462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1078:0,84,255:40,0 chr1 226334463 . T . PASS END=226334463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1113:0,75,255:30,0 chr1 226334464 . C . PASS END=226334473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1243:0,91,255:33,0 chr1 226334474 . A . PASS END=226334474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:31,0 chr1 226334475 . A . PASS END=226334476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:32,0 chr1 226334477 . G . PASS END=226334477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:28,0 chr1 226334478 . G . PASS END=226334492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1127:0,93,255:31,0 chr1 226334493 . T . PASS END=226334494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 226334495 . T . PASS END=226334495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 226334496 . T . PASS END=226334496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:26,0 chr1 226334497 . G . PASS END=226334501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 226334502 . T . PASS END=226334502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 226334503 . C . PASS END=226334503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226334504 . T . PASS END=226334504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:25,0 chr1 226334505 . C . PASS END=226334507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226334508 . C . PASS END=226334508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 226334509 . A . PASS END=226334514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 226334515 . G . PASS END=226334515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 226334516 . A . PASS END=226334517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226334518 . G . PASS END=226334518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:25,0 chr1 226334519 . T . PASS END=226334522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 226340036 . C . PASS END=226340037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 226340038 . T . PASS END=226340038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 226340039 . C . PASS END=226340320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:30:0,80,1101:0,80,255:40,0 chr1 226342348 . C . PASS END=226342348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 226342349 . T . PASS END=226342349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:24,0 chr1 226342350 . T . PASS END=226342352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,911:0,62,255:26,0 chr1 226342353 . G . PASS END=226342365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,928:0,81,255:31,0 chr1 226342366 . G . PASS END=226342366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:31,0 chr1 226342367 . G . PASS END=226342370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1227:0,86,255:34,0 chr1 226342371 . T . PASS END=226342371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:32,0 chr1 226342372 . C . PASS END=226342520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1139:0,80,255:40,0 chr1 226342521 . T . PASS END=226342534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr1 226346885 . C . PASS END=226346892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,962:0,65,255:26,0 chr1 226346893 . G . PASS END=226346897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1041:0,84,255:30,0 chr1 226346898 . A . PASS END=226346898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 226346899 . G . PASS END=226346899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 226346900 . C . PASS END=226346903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1063:0,74,255:29,0 chr1 226346904 . A . PASS END=226347032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1163:0,80,255:40,0 chr1 226347033 . G . PASS END=226347041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 226347042 . G . PASS END=226347054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 226347055 . G . PASS END=226347055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:19,0 chr1 226347056 . C . PASS END=226347059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:18,0 chr1 226349232 . T . PASS END=226349390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:37:0,81,1244:0,81,255:40,0 chr1 226352490 . C . PASS END=226352497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,129,255:40,0 chr1 226352498 . T G, 215.54 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,29,0:0,27,0:166:253,169,0,2168,169,2168:255,171,0:0,0:2.1554e+02,1.6554e+02,0.0000e+00,4.5000e+02,2.0031e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,22:0,0,33,23 chr1 226352499 . T . PASS END=226352535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,141,255:40,0 chr1 226352536 . A . PASS END=226352627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:90:45:0,90,1350:0,131,255:40,0 chr1 226352628 . C . PASS END=226352630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr1 226353560 . C . PASS END=226353701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:86:34:0,86,1263:0,86,255:40,0 chr1 226374091 . C . PASS END=226374112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,243:0,24,243:8,0 chr1 226374113 . G . PASS END=226374113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 226374114 . C . PASS END=226374118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 226374119 . C . PASS END=226374128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 226374129 . A . PASS END=226374149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 226374150 . T . LowGQ END=226374150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:6,0 chr1 226374151 . C . PASS END=226374160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 226374161 . C . PASS END=226374161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 226374162 . G . PASS END=226374172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,1 chr1 226374173 . C . LowGQ END=226374174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,213:11,0,223:7,1 chr1 226374175 . C . PASS END=226374175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 226374176 . G . PASS END=226374176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 226374177 . C . PASS END=226374178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 226374179 . C . PASS END=226374185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 226374186 . G . PASS END=226374186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 226374187 . C . PASS END=226374197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 226374198 . G . PASS END=226374205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:9,0 chr1 226374206 . C . PASS END=226374206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 226374207 . T . PASS END=226374210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 226374211 . C . PASS END=226374242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:13,0 chr1 226374243 . G . PASS END=226374249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226374250 . A . PASS END=226374259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 226374260 . C . PASS END=226374266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 226374267 . G . PASS END=226374273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226374274 . G . PASS END=226374285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 226374286 . C . PASS END=226374286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 226374287 . C . PASS END=226374331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 226374332 . G . PASS END=226374332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 226374333 . T . PASS END=226374341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 226374342 . A . PASS END=226374344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226374345 . T . PASS END=226374345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 226374346 . C . PASS END=226374348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226374349 . G . PASS END=226374349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 226374350 . T . PASS END=226374350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226374351 . C . PASS END=226374361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,32,255:12,0 chr1 226374362 . C . PASS END=226374376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,438:0,45,255:15,0 chr1 226411383 . A . PASS END=226411387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 226411388 . C . PASS END=226411388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr1 226411389 . A . PASS END=226411396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 226411397 . G . PASS END=226411402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 226411403 . T . PASS END=226411403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 226411404 . G . PASS END=226411405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226411406 . G . PASS END=226411406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr1 226411407 . C . PASS END=226411407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 226411408 . T . PASS END=226411408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 226411409 . C . PASS END=226411410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 226411411 . A . PASS END=226411411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 226411412 . G . PASS END=226411412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 226411413 . T . LowGQ END=226411413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,302:8,0,255:11,0 chr1 226411414 . T . PASS END=226411419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 226411420 . A . PASS END=226411420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 226411421 . G . PASS END=226411426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 226411427 . C . PASS END=226411443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 226411444 . G . PASS END=226411452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 226411453 . A . PASS END=226411453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 226411454 . C . PASS END=226411471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 226411472 . G . PASS END=226411490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:10:6:0,10,225:0,10,210:7,0 chr1 226411491 . G . PASS END=226411577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,55:3,0 chr1 226411578 . C . PASS END=226411626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 226411627 . C . PASS END=226411657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 226411658 . T . PASS END=226411658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 226411659 . T . PASS END=226411662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 226411663 . G . PASS END=226411668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 226411669 . A . PASS END=226411672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 226411673 . G . PASS END=226411686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 226411687 . A . PASS END=226411687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 226411688 . G . PASS END=226411695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 226411696 . T . PASS END=226411704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 226411705 . C . PASS END=226411735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr1 226411736 . C . PASS END=226411762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 226411763 . G . PASS END=226411775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 226413184 . C . PASS END=226413200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,590:0,40,255:18,0 chr1 226413201 . C . PASS END=226413202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 226413203 . T . PASS END=226413203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 226413204 . C . PASS END=226413208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:65:22:0,65,784:0,65,255:26,0 chr1 226413209 . T . PASS END=226413210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr1 226413211 . T . PASS END=226413211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 226413212 . G . PASS END=226413282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1063:0,80,255:37,0 chr1 226413283 . A . PASS END=226413283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1001:0,77,255:31,0 chr1 226413284 . T . PASS END=226413297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1037:0,85,255:35,0 chr1 226413298 . T . PASS END=226413298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1247:0,61,255:33,0 chr1 226413299 . G . PASS END=226413469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:96:38:0,96,1313:0,96,255:40,0 chr1 226413470 . A . PASS END=226413470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:76:54:0,76,1867:0,76,255:40,0 chr1 226413471 . C . PASS END=226413513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,106,1353:0,106,255:40,0 chr1 226420202 . T . PASS END=226420273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:38:0,84,1260:0,98,255:40,0 chr1 226420274 . T . PASS END=226420278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:25,0 chr1 226420279 . C . PASS END=226420280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:27,0 chr1 226420281 . T . PASS END=226420294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,953:0,65,255:26,0 chr1 226420295 . A . PASS END=226420295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 226420296 . T . PASS END=226420304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,839:0,69,255:23,0 chr1 226420305 . C . PASS END=226420307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 226420793 . T . PASS END=226420894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:73:0,120,1800:0,201,255:40,0 chr1 226421045 . C . PASS END=226421224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:32:0,87,1227:0,88,255:40,0 chr1 226426672 . C . PASS END=226426797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:40:0,104,1435:0,104,255:40,1 chr1 226435902 . T . PASS END=226435904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr1 226438540 . C . PASS END=226438620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:74:0,120,1800:0,189,255:40,0 chr1 226453234 . C . PASS END=226453335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:58:0,120,1800:0,124,255:40,1 chr1 226453914 . T . PASS END=226454033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:98:37:0,98,1349:0,98,255:40,0 chr1 226455658 . G . PASS END=226455789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:42:0,96,1455:0,96,255:40,1 chr1 226455790 . T . PASS END=226455790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:33,0 chr1 226455791 . G . PASS END=226455791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1313:0,97,255:33,0 chr1 226465476 . C . PASS END=226465633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:32:0,81,1186:0,83,255:40,0 chr1 226474034 . C . PASS END=226474094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:58:0,120,1800:0,174,255:40,0 chr1 226474095 . T . PASS END=226474131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,155,255:40,0 chr1 226474132 . G A, 224.57 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,26,0:0,33,0:175:262,178,0,2268,178,2268:255,181,0:0,0:2.2457e+02,1.7457e+02,0.0000e+00,4.5000e+02,2.0934e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,41:0,0,31,28 chr1 226474133 . A . PASS END=226474159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,108,1641:0,108,255:40,0 chr1 226475365 . T . PASS END=226475366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:37,0 chr1 226475367 . A . PASS END=226475367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr1 226475368 . T . PASS END=226475498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:84:37:0,84,1252:0,84,255:40,0 chr1 226483543 . C . PASS END=226483647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,123,255:40,0 chr1 226485420 . C . PASS END=226485514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,110,1528:0,110,255:40,0 chr1 226488874 . C . PASS END=226488906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:70:0,120,1800:0,209,255:40,0 chr1 226496810 . T . PASS END=226496862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:24,0 chr1 226496863 . T . PASS END=226496863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 226496864 . T . PASS END=226496867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 226496868 . A . PASS END=226496869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr1 226496870 . G . PASS END=226496878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 226496879 . C . PASS END=226496879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 226496880 . G . PASS END=226496880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 226496881 . C . PASS END=226496884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,53,255:18,0 chr1 226496885 . G . PASS END=226496885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:16,0 chr1 226496886 . C . PASS END=226496901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 226496902 . C . PASS END=226496902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 226496903 . T . PASS END=226496912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 226496913 . A . PASS END=226496913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 226496914 . G . PASS END=226496914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226496915 . G . PASS END=226496915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 226496916 . G . PASS END=226496927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 226496928 . C . PASS END=226496928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 226496929 . G . PASS END=226496929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 226496930 . G . PASS END=226496934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 226496935 . C . LowGQ END=226496935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 226496936 . G . PASS END=226496939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,341:0,27,255:9,0 chr1 226496940 . C . PASS END=226496941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 226496942 . C . PASS END=226496942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 226496943 . G . PASS END=226496943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 226496944 . C . PASS END=226496951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 226496952 . C . PASS END=226496962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:7:0,11,180:0,11,255:6,0 chr1 226496963 . T . LowGQ END=226496973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:4:0,0,135:0,0,133:3,0 chr1 226496974 . C . PASS END=226496979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr1 226496980 . G . PASS END=226497001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,116:3,0 chr1 226497002 . C . PASS END=226497009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 226497010 . C . PASS END=226497011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 226497012 . G . PASS END=226497019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr1 226497020 . G . PASS END=226497038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 226497039 . G . PASS END=226497039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 226497040 . C . PASS END=226497041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 226497042 . C . PASS END=226497043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 226497044 . T . PASS END=226497044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 226497045 . C . PASS END=226497045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr1 226497046 . G . PASS END=226497046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 226497047 . C . PASS END=226497059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 226497060 . G . PASS END=226497062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 226497063 . T . PASS END=226497063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 226497064 . C . PASS END=226497073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:11,0 chr1 226497074 . C . PASS END=226497074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 226497075 . G . PASS END=226497079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr1 226497080 . G . PASS END=226497080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 226497081 . G . PASS END=226497088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 226497089 . G . PASS END=226497098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 226497099 . G . PASS END=226497099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 226497100 . C . PASS END=226497100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226497101 . C . PASS END=226497101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226497102 . G . PASS END=226497102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 226497103 . C . PASS END=226497111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 226497112 . G . PASS END=226497112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 226497113 . C . PASS END=226497134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:17,0 chr1 226497135 . A . PASS END=226497135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:13,0 chr1 226497136 . G . PASS END=226497140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 226497141 . A . PASS END=226497141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 226497142 . C . PASS END=226497142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 226497143 . C . PASS END=226497143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 226497144 . A . PASS END=226497144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 226497145 . G . PASS END=226497164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 226497165 . C . PASS END=226497165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 226497166 . C . PASS END=226497170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 226497171 . T . PASS END=226497171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 226497172 . C . PASS END=226497179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 226497180 . A . PASS END=226497180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226497181 . T . PASS END=226497236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,627:0,40,255:19,0 chr1 226497237 . G . PASS END=226497263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 226497264 . A . PASS END=226497264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 226497265 . A . PASS END=226497267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 226497268 . A . PASS END=226497268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr1 226497269 . A . PASS END=226497276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,798:0,63,255:25,0 chr1 226497277 . G . PASS END=226497283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 226497284 . G . PASS END=226497290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr1 226497327 . A . PASS END=226497362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:33:0,92,1340:0,92,255:36,0 chr1 226497363 . C . PASS END=226497363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr1 226497364 . C . PASS END=226497493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1228:0,81,255:40,2 chr1 226497494 . G . PASS END=226497495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:43:0,63,1476:0,63,255:40,2 chr1 226497496 . G . PASS END=226497547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:37:0,84,1274:0,84,255:39,0 chr1 226497548 . G . PASS END=226497548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr1 226497549 . A . PASS END=226497561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1111:0,85,255:33,0 chr1 226497562 . A . PASS END=226497565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1063:0,74,255:29,0 chr1 226497566 . G . PASS END=226497566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 226497567 . T . PASS END=226497567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 226497568 . T . PASS END=226497568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 226497569 . T . PASS END=226497569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 226497570 . C . PASS END=226497570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 226497571 . A . PASS END=226497571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr1 226497572 . T . PASS END=226497572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 226497573 . C . PASS END=226497574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 226497575 . A . PASS END=226497575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:26,0 chr1 226497576 . T . PASS END=226497576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 226549161 . T . PASS END=226549242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,143,255:40,0 chr1 226549670 . T . PASS END=226549784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,113,1567:0,113,255:40,0 chr1 226550800 . C . PASS END=226550861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1391:0,105,255:40,0 chr1 226551644 . A . PASS END=226551653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr1 226551654 . G . PASS END=226551667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,740:0,63,255:25,0 chr1 226551668 . A . PASS END=226551668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr1 226551669 . A . PASS END=226551671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,842:0,75,255:25,0 chr1 226551672 . G . PASS END=226551672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 226551673 . G . PASS END=226551675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 226551676 . T . PASS END=226551683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226551684 . T . PASS END=226551684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 226551685 . T . PASS END=226551688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 226551689 . T . PASS END=226551689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr1 226551690 . C . PASS END=226551711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1123:0,90,255:36,0 chr1 226551712 . G . PASS END=226551712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 226551713 . T . PASS END=226551727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:38:0,80,1136:0,80,255:38,0 chr1 226551728 . A . PASS END=226551728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:35,0 chr1 226551729 . C . PASS END=226551743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1347:0,95,255:36,0 chr1 226551744 . A . PASS END=226551744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:31,0 chr1 226551745 . G . PASS END=226551748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:33,0 chr1 226551749 . C . PASS END=226551749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1241:0,39,255:31,0 chr1 226551750 . C . PASS END=226551755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:33,0 chr1 226551756 . C . PASS END=226551756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr1 226551757 . A . PASS END=226551757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 226551758 . A . PASS END=226551771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:62:26:0,62,930:0,62,255:26,0 chr1 226552703 . C . PASS END=226552719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,854:0,62,255:26,0 chr1 226552720 . G . PASS END=226552757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1003:0,80,255:32,0 chr1 226552758 . T . PASS END=226552758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,939:0,79,255:30,0 chr1 226552759 . T . PASS END=226552788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1166:0,83,255:33,0 chr1 226552789 . T . PASS END=226552789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr1 226552790 . T . PASS END=226552794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1156:0,99,255:33,0 chr1 226552795 . T . PASS END=226552795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr1 226552796 . A . PASS END=226552807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 226552808 . A . PASS END=226552839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:23,0 chr1 226552840 . G . PASS END=226552855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,651:0,51,255:19,0 chr1 226553655 . A . PASS END=226553753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:32:0,95,1225:0,95,255:40,0 chr1 226555181 . C . PASS END=226555189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr1 226555190 . A . PASS END=226555190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 226555191 . G . PASS END=226555194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1251:0,91,255:36,0 chr1 226555195 . T . PASS END=226555195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr1 226555196 . G . PASS END=226555309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:37:0,82,1366:0,82,255:40,0 chr1 226555900 . C . PASS END=226555901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 226555902 . G . PASS END=226555916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:29,0 chr1 226555917 . T . PASS END=226555917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 226555918 . G . PASS END=226555983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1230:0,89,255:38,0 chr1 226555984 . A . PASS END=226555984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1118:0,42,255:34,0 chr1 226555985 . T . PASS END=226556007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:35:0,83,1247:0,83,255:37,0 chr1 226556008 . G . PASS END=226556008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1174:0,74,255:27,0 chr1 226556009 . C . PASS END=226556014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:28,0 chr1 226556015 . G . PASS END=226556015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 226556016 . A . PASS END=226556016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,878:0,43,255:25,0 chr1 226556017 . C . PASS END=226556022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 226558135 . C . PASS END=226558218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,107,1451:0,107,255:40,0 chr1 226561927 . C . PASS END=226561929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 226561930 . A . PASS END=226561930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226561931 . T . PASS END=226561931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 226561932 . A . PASS END=226561934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1395:0,96,255:33,0 chr1 226561935 . C . PASS END=226561945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1296:0,92,255:36,0 chr1 226561946 . T . PASS END=226561947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:36:0,67,1237:0,67,255:36,0 chr1 226561948 . C . PASS END=226562055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:38:0,86,1357:0,86,255:40,0 chr1 226564809 . C . PASS END=226564810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr1 226564811 . G . PASS END=226564811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 226564812 . G . PASS END=226564812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 226564813 . C . PASS END=226564858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1260:0,87,255:38,0 chr1 226564859 . A . PASS END=226564860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,1 chr1 226564861 . T . PASS END=226564861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:39:0,83,1384:0,83,255:38,1 chr1 226564862 . T . PASS END=226564862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:39,0 chr1 226564863 . T . PASS END=226564966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1114:0,80,255:40,0 chr1 226564967 . C . PASS END=226564983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:24:0,60,900:0,72,255:23,0 chr1 226564984 . C . PASS END=226564999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,645:0,54,255:18,0 chr1 226565000 . A . PASS END=226565000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 226565001 . A . PASS END=226565004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 226566843 . C . PASS END=226566865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1114:0,99,255:35,0 chr1 226566866 . A . PASS END=226566866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,943:0,55,255:32,0 chr1 226566867 . A . PASS END=226566945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1167:0,84,255:40,0 chr1 226566946 . T . PASS END=226566949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 226566950 . C . PASS END=226566953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226566954 . A . PASS END=226566954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 226566955 . C . PASS END=226566955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226566956 . A . PASS END=226566962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr1 226566963 . G . PASS END=226566975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:19:0,45,675:0,57,255:19,0 chr1 226567274 . C . PASS END=226567342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,123,255:40,0 chr1 226567623 . C . PASS END=226567625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 226567626 . C . PASS END=226567626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 226567627 . C . PASS END=226567640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,562:0,54,255:19,0 chr1 226567641 . C . PASS END=226567646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 226567647 . T . PASS END=226567647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 226567648 . T . PASS END=226567651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 226567652 . T . PASS END=226567655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 226567656 . A . PASS END=226567663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 226567664 . G . PASS END=226567664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 226567665 . C . PASS END=226567679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,969:0,75,255:25,0 chr1 226567680 . T . PASS END=226567680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:24,0 chr1 226567681 . T . PASS END=226567681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 226567682 . G . PASS END=226567682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 226567683 . G . PASS END=226567683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:25,0 chr1 226567684 . G . PASS END=226567735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:26,0 chr1 226567736 . A . PASS END=226567736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,937:0,42,255:19,0 chr1 226567737 . T . PASS END=226567741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:20,0 chr1 226567742 . G . PASS END=226567743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,804:0,53,255:20,0 chr1 226567744 . T . PASS END=226567773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,798:0,62,255:26,0 chr1 226567774 . G . PASS END=226567778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:32,0 chr1 226567779 . A . PASS END=226567779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 226567780 . G . PASS END=226567832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1196:0,95,255:36,0 chr1 226567833 . C . PASS END=226567833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr1 226567834 . C . PASS END=226567847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr1 226567848 . T . PASS END=226567848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 226567849 . C . PASS END=226567850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 226567851 . T . PASS END=226567851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr1 226567852 . C . PASS END=226567853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 226567854 . T . PASS END=226567856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 226567857 . C . PASS END=226567859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226567860 . C . PASS END=226567865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1022:0,68,255:23,0 chr1 226568769 . T . PASS END=226568883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1215:0,90,255:40,0 chr1 226568884 . G . PASS END=226568909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,60,255:26,0 chr1 226570737 . C . PASS END=226570748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:18,0 chr1 226570749 . A . PASS END=226570749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 226570750 . G . PASS END=226570752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 226570753 . G . PASS END=226570753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 226570754 . T . PASS END=226570754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr1 226570755 . T . PASS END=226570772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:26,0 chr1 226570773 . A . PASS END=226570802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,942:0,81,255:40,0 chr1 226570803 . C . PASS END=226570839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,89,255:38,0 chr1 226570840 . T C, 149.33 PASS DP=34;MQ=249.91;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,17,0:0,17,0:99:187,102,0,1314,102,1314:255,102,0:0,0:1.4933e+02,9.9330e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,20:0,0,13,21 chr1 226570841 . T . PASS END=226570846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 226570847 . A . PASS END=226570847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 226570848 . C . PASS END=226570853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 226570854 . A . PASS END=226570857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,842:0,67,255:26,0 chr1 226570858 . C . PASS END=226570859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226570860 . T . PASS END=226570877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:25:0,67,931:0,67,255:25,0 chr1 226570878 . G . PASS END=226570884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 226573205 . C . PASS END=226573214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,552:0,40,255:17,0 chr1 226573215 . A . PASS END=226573222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:23,0 chr1 226573223 . C . PASS END=226573223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 226573224 . T . PASS END=226573226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 226573227 . C . PASS END=226573227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 226573228 . G . PASS END=226573241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr1 226573242 . G . PASS END=226573326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:30:0,90,1072:0,90,255:40,0 chr1 226573327 . C . PASS END=226573360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1305:0,99,255:40,0 chr1 226573361 . A . PASS END=226573363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1131:0,66,255:26,0 chr1 226573364 . A G, 44.98 PASS DP=32;MQ=249.69;MQRankSum=4.563;ReadPosRankSum=2.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,11,0:0.344,0.000:32:7,9,0:14,2,0:44:80,0,47,180,180,180:255,0,255:18,0:4.4980e+01,1.8146e-04,5.0000e+01,1.7975e+02,2.1452e+02,1.8276e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,10,4,7:9,12,6,5 chr1 226573365 . G . PASS END=226573365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 226573366 . C . PASS END=226573370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 226573371 . C . PASS END=226573381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 226574027 . C . PASS END=226574132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:32:0,90,1350:0,96,255:40,0 chr1 226574133 . T . PASS END=226574137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 226574138 . C . PASS END=226574140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 226574141 . A . PASS END=226574143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:26,0 chr1 226576357 . C . PASS END=226576456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:50:0,120,1800:0,126,255:40,0 chr1 226578111 . C . PASS END=226578123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,917:0,69,255:26,0 chr1 226578124 . C . PASS END=226578127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 226578128 . T . PASS END=226578128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 226578129 . G . PASS END=226578134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 226578135 . T . PASS END=226578135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 226578136 . G . PASS END=226578136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 226578137 . C . PASS END=226578138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 226578139 . T . PASS END=226578139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 226578140 . C . PASS END=226578174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,995:0,84,255:31,0 chr1 226578175 . T . PASS END=226578175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 226578176 . G . PASS END=226578312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1129:0,85,255:40,0 chr1 226578313 . G . PASS END=226578325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:27:0,72,1080:0,74,255:26,0 chr1 226579900 . C . PASS END=226580015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:34:0,88,1211:0,88,255:40,0 chr1 226580641 . C . PASS END=226580681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,150,255:40,0 chr1 226589733 . T . PASS END=226589733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 226589734 . C . PASS END=226589734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,632:0,13,255:18,0 chr1 226589735 . A . PASS END=226589741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr1 226589742 . A . PASS END=226589742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr1 226589743 . G . PASS END=226589743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 226589744 . A . PASS END=226589744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 226589745 . T . PASS END=226589746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 226589747 . A . PASS END=226589753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 226589754 . G . PASS END=226589760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 226589761 . A . PASS END=226589761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 226589762 . G . PASS END=226589763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 226589764 . T . PASS END=226589764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 226589765 . G . PASS END=226589794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1056:0,80,255:34,0 chr1 226589795 . T . PASS END=226589795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:33,0 chr1 226589796 . G . PASS END=226589823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1199:0,86,255:34,0 chr1 226589824 . G . PASS END=226589824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:26,0 chr1 226589825 . G . PASS END=226589827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 226589828 . G . PASS END=226589856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,962:0,74,255:26,0 chr1 226589857 . C . PASS END=226589861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 226589862 . T . PASS END=226589873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr1 226589874 . G . PASS END=226589879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 226589880 . G . PASS END=226589880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:26,0 chr1 226589881 . G . PASS END=226589884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 226589885 . A . PASS END=226589886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 226589887 . T . PASS END=226589893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 226589894 . G . PASS END=226589898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,71,255:24,0 chr1 226589899 . C . PASS END=226589899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:22,0 chr1 226589900 . C . PASS END=226589901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 226589902 . A . PASS END=226589904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr1 226589905 . A . PASS END=226589906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr1 226589907 . G . PASS END=226589914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,105,255:30,0 chr1 226589915 . C . PASS END=226589915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:27,0 chr1 226589916 . T . PASS END=226589920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1166:0,85,255:29,0 chr1 226589921 . C . PASS END=226589923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1169:0,80,255:29,0 chr1 226589924 . C . PASS END=226589924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 226589925 . T . PASS END=226589928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226589929 . G . PASS END=226589929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 226589930 . C . PASS END=226589931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 226589932 . T . PASS END=226589933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 226589934 . C . PASS END=226589935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 226589936 . C . PASS END=226589936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 226589937 . T . PASS END=226589946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1133:0,83,255:32,0 chr1 226589947 . A . PASS END=226589947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr1 226589948 . C . PASS END=226589957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1235:0,86,255:34,0 chr1 226589958 . G A, 40.60 PASS DP=34;MQ=217.03;MQRankSum=1.657;ReadPosRankSum=2.282;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,11,0:0.324,0.000:34:12,7,0:11,4,0:40:75,0,50,391,823,1213:255,0,255:23,0:4.0601e+01,3.9996e-04,5.3000e+01,3.9088e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,7,4:10,13,5,6 chr1 226589959 . T . PASS END=226589995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:35:0,89,1271:0,89,255:40,0 chr1 226589996 . C . PASS END=226590059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,99,1485:0,109,255:40,0 chr1 226590060 . T . PASS END=226590060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1226:0,69,255:33,0 chr1 226590061 . T . PASS END=226590080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1186:0,86,255:34,0 chr1 226595511 . C . PASS END=226595568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,536:0,48,255:19,0 chr1 226595569 . C . PASS END=226595577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 226595578 . C . PASS END=226595580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 226595581 . C . PASS END=226595589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr1 226595590 . G . PASS END=226595596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226595597 . C . PASS END=226595624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr1 226595625 . C . PASS END=226595625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 226595626 . G . PASS END=226595630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 226736606 . A . PASS END=226736651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,133:0,15,133:6,0 chr1 226736652 . C . PASS END=226736669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 226736670 . C . PASS END=226736676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 226736677 . G . PASS END=226736693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 226736694 . G . PASS END=226736701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,449:0,33,255:13,0 chr1 226736702 . G . PASS END=226736702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226736703 . T . PASS END=226736706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226736707 . G . PASS END=226736774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,515:0,41,255:18,0 chr1 226736775 . G . PASS END=226736775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 226736776 . C . PASS END=226736807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:18,0 chr1 226784503 . G . PASS END=226784511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:16,0 chr1 226784512 . T . PASS END=226784512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 226784513 . C . PASS END=226784513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 226784514 . T . PASS END=226784514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 226784515 . C . PASS END=226784517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 226784518 . C . PASS END=226784518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 226784519 . C . PASS END=226784520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 226784521 . T . PASS END=226784521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr1 226784522 . C . PASS END=226784523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 226784524 . C . PASS END=226784524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:15,0 chr1 226784525 . T . PASS END=226784527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 226784528 . G . PASS END=226784528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 226784529 . C . PASS END=226784529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,470:0,20,255:16,0 chr1 226784530 . T . PASS END=226784530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 226784531 . G . PASS END=226784531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 226784532 . T . PASS END=226784532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,593:0,43,255:19,0 chr1 226784533 . G . PASS END=226784533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 226784534 . C . PASS END=226784534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,545:0,27,255:18,0 chr1 226784535 . G . PASS END=226784541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 226784542 . G . PASS END=226784542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,672:0,52,255:22,0 chr1 226784543 . C . PASS END=226784553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,899:0,72,255:25,0 chr1 226784554 . C . PASS END=226784554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 226784555 . G . PASS END=226784595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,64,255:25,0 chr1 226784596 . C . PASS END=226784620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 226784621 . C . PASS END=226784649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,953:0,62,255:26,0 chr1 226784650 . T . PASS END=226784650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 226784651 . C . PASS END=226784676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,864:0,69,255:24,0 chr1 226784677 . T . PASS END=226784680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 226784681 . C . PASS END=226784681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 226784682 . A . PASS END=226784682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr1 226788367 . T . PASS END=226788375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:55:0,120,1800:0,149,255:40,0 chr1 226789696 . C . PASS END=226789700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 226789703 . A . PASS END=226789703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 226789704 . C . PASS END=226789705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 226789706 . G . PASS END=226789712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 226789713 . A . PASS END=226789741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 226822372 . T . PASS END=226822387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr1 226822388 . T . PASS END=226822396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,648:0,60,255:22,0 chr1 226822397 . A . PASS END=226822397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 226822398 . T . PASS END=226822492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,861:0,69,255:26,0 chr1 226822493 . C . PASS END=226822496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:27,0 chr1 226822497 . C . PASS END=226822497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 226822498 . A . PASS END=226822529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:31,0 chr1 226822530 . T . PASS END=226822530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 226822531 . C . PASS END=226822532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 226822533 . A . PASS END=226822533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 226822534 . C . PASS END=226822535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 226822536 . C . PASS END=226822587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,868:0,62,255:26,0 chr1 226825380 . C . PASS END=226825451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,105,1365:0,107,255:40,0 chr1 226827258 . C . PASS END=226827261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:35,0 chr1 226827262 . A . PASS END=226827262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1406:0,71,255:34,0 chr1 226827263 . T . PASS END=226827359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1319:0,90,255:40,0 chr1 226829622 . C . PASS END=226829634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 226829635 . A . PASS END=226829659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:18,0 chr1 226829660 . A . PASS END=226829662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 226829663 . T . PASS END=226829663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 226829664 . G . PASS END=226829674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr1 226829675 . G . PASS END=226829675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 226829676 . C . PASS END=226829679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 226829680 . T . PASS END=226829680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 226829681 . G . PASS END=226829684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 226829685 . G . PASS END=226829685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 226829686 . T . PASS END=226829694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 226829695 . T . PASS END=226829695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 226829696 . T . PASS END=226829736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,831:0,69,255:26,0 chr1 226829737 . T . PASS END=226829741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1041:0,81,255:28,0 chr1 226829742 . G . PASS END=226829742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 226829743 . T . PASS END=226829747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr1 226829748 . C . PASS END=226829748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 226829749 . T . PASS END=226829754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 226829755 . A . PASS END=226829755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 226829756 . T . PASS END=226829774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 226829775 . C . PASS END=226829795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr1 226829796 . G . PASS END=226829813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr1 226829814 . C . PASS END=226829819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 226829820 . G . PASS END=226829821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 226829822 . A . PASS END=226829826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 226834868 . C . PASS END=226834871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 226834872 . T . PASS END=226834872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 226834873 . T . PASS END=226834877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:23,0 chr1 226834878 . T . PASS END=226834878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 226834879 . C . PASS END=226834884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 226834885 . G . PASS END=226834889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:35,0 chr1 226834890 . T . PASS END=226834890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr1 226834891 . C . PASS END=226834909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1327:0,95,255:38,0 chr1 226834910 . T . PASS END=226834910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:38,0 chr1 226834911 . C . PASS END=226834939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:41:0,85,1490:0,85,255:40,0 chr1 226834940 . C . PASS END=226834940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:41:45:0,41,1496:0,41,255:37,0 chr1 226834941 . G . PASS END=226835018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:34:0,85,1280:0,85,255:40,0 chr1 226835019 . A . PASS END=226835019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr1 226835020 . G . PASS END=226835026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr1 226835027 . T . PASS END=226835048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:25,0 chr1 226835049 . G . PASS END=226835054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:24:0,51,765:0,72,255:18,0 chr1 226835055 . T . PASS END=226835055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:18,0 chr1 226835056 . G . PASS END=226835068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,645:0,54,255:18,0 chr1 226835069 . G . PASS END=226835069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 226835070 . C . PASS END=226835076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 226835077 . A . PASS END=226835081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,41,255:13,0 chr1 226836373 . C . PASS END=226836472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1341:0,81,255:40,0 chr1 226895614 . T . PASS END=226895616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 226923228 . C . PASS END=226923236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1047:0,80,255:33,0 chr1 226923237 . T . PASS END=226923237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr1 226923238 . T . PASS END=226923263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1133:0,82,255:36,0 chr1 226923264 . G A, 160.91 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,17,0:0,21,0:111:199,114,0,1444,114,1444:255,114,0:0,0:1.6091e+02,1.1091e+02,0.0000e+00,4.5000e+02,1.4568e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,15:0,0,22,16 chr1 226923265 . G . PASS END=226923301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:38:0,93,1446:0,93,255:40,0 chr1 226923302 . A . PASS END=226923341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:31:0,87,1271:0,89,255:38,0 chr1 226923342 . C . PASS END=226923342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 226923343 . G . PASS END=226923353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1185:0,80,255:29,0 chr1 226923354 . C . PASS END=226923375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,64,255:26,0 chr1 226923376 . A . PASS END=226923376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 226923377 . G . PASS END=226923391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 226923392 . G . PASS END=226923398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 226923399 . T . PASS END=226923406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 226923407 . T . PASS END=226923407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 226923408 . C . PASS END=226923426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 226923427 . T . PASS END=226923440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,765:0,50,255:19,0 chr1 226923441 . G . PASS END=226923467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:24,0 chr1 226923468 . G . PASS END=226923504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,884:0,72,255:25,0 chr1 226923505 . G T, 124.79 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,11,0:0,15,0:75:163,78,0,979,78,979:255,78,0:0,0:1.2479e+02,7.4794e+01,2.5886e-07,4.5000e+02,1.0956e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,14:0,0,15,11 chr1 226923506 . G . PASS END=226923527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,923:0,75,255:26,0 chr1 226923528 . A . PASS END=226923537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 226923538 . G . PASS END=226923542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 226923543 . A . PASS END=226923543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 226923544 . C . PASS END=226923605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 226923606 . C . PASS END=226923607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 226923608 . A . PASS END=226923608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 226923609 . A . PASS END=226923611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 226923612 . G . PASS END=226923614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 226923615 . T . PASS END=226923635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,782:0,50,255:19,0 chr1 226923636 . A . PASS END=226923651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 226923652 . G . PASS END=226923652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 226923653 . G . PASS END=226923655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 226923656 . G . PASS END=226923663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 226923664 . A . PASS END=226923666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 226923667 . C . PASS END=226923671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,63,255:19,0 chr1 226923672 . C . PASS END=226923675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 226923676 . G . PASS END=226923677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 226923678 . A . PASS END=226923687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 226923688 . G . PASS END=226923688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:20,0 chr1 226923689 . G . PASS END=226923689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 226923690 . T . PASS END=226923690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:17,0 chr1 226923691 . T . PASS END=226923693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr1 226923694 . T . PASS END=226923695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 226923696 . C . PASS END=226923696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 226923697 . A . PASS END=226923707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226923708 . A . PASS END=226923709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 226923710 . C . PASS END=226923711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 226923712 . T . PASS END=226923726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,625:0,57,255:19,0 chr1 226923727 . G . PASS END=226923728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 226923729 . C . PASS END=226923729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr1 226923730 . T . PASS END=226923752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 226923753 . T . PASS END=226923753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 226923754 . C . PASS END=226923762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 226923763 . A . PASS END=226923763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 226923764 . C . PASS END=226923775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:21,0 chr1 226923776 . C . PASS END=226923776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 226923777 . C . PASS END=226923780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 226923781 . T . PASS END=226923809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,50,255:19,0 chr1 226923810 . C . PASS END=226923824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr1 226923825 . T . PASS END=226923825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 226923826 . C . PASS END=226923827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 226923828 . C . PASS END=226923828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 226923829 . T . PASS END=226923829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 226923830 . C . PASS END=226923831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 226923832 . A . PASS END=226923843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,31,255:13,0 chr1 226923844 . A . PASS END=226923844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:10,0 chr1 226923845 . G . PASS END=226923851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr1 226923852 . A . PASS END=226923864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 226923865 . A . PASS END=226923865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 226923866 . C . LowGQ END=226923868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:5,0,255:10,1 chr1 226923869 . G . PASS END=226923875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr1 226923876 . A . PASS END=226923876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 226923877 . C . PASS END=226923877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 226923878 . T . PASS END=226923878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 226923879 . T . PASS END=226923886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 226923887 . C . PASS END=226923887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 226923888 . C . PASS END=226923888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 226923889 . T . PASS END=226923900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 226923901 . G . PASS END=226923905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr1 226923906 . C . PASS END=226923906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 226923907 . A . PASS END=226923934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr1 226923935 . G . PASS END=226923936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 226923937 . G . PASS END=226923937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 226923938 . A C, 79.65 PASS DP=11;MQ=248.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,5,0:0,6,0:30:117,33,0,381,33,381:255,33,0:0,0:7.9647e+01,2.9647e+01,4.7148e-03,3.7836e+02,6.4417e+01,3.8136e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,4:0,0,5,6 chr1 226923939 . A . PASS END=226923952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,443:0,33,255:12,0 chr1 226923953 . C . PASS END=226923953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 226923954 . G . PASS END=226923957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 226923958 . T . PASS END=226923958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 226923959 . G . PASS END=226923973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 226923974 . T . PASS END=226923975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 226923976 . T . PASS END=226923985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 226923986 . T . PASS END=226923986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 226923987 . T . PASS END=226923997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:13,0 chr1 226923998 . C . PASS END=226923998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 226923999 . A . PASS END=226924019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 226924020 . G . PASS END=226924020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 226924021 . C . PASS END=226924023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226924024 . C . PASS END=226924024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 226924025 . A . PASS END=226924076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr1 226924077 . G . PASS END=226924079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226924080 . C . PASS END=226924084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 226924085 . C . PASS END=226924085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 226924086 . T . PASS END=226924091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 226924092 . T . PASS END=226924092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 226924093 . G . PASS END=226924099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 226924100 . T . PASS END=226924100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr1 226924101 . C . PASS END=226924114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 226924115 . A . PASS END=226924115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 226924116 . C . PASS END=226924173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr1 226924174 . C . PASS END=226924190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr1 226924191 . G . PASS END=226924192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 226924193 . G . PASS END=226924197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 226924198 . A . PASS END=226924211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 226924212 . G . PASS END=226924219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 226924220 . C . PASS END=226924223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226924224 . G . PASS END=226924232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 226924233 . T . PASS END=226924233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,405:0,15,255:13,0 chr1 226924234 . C . PASS END=226924254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,629:0,48,255:18,0 chr1 226924255 . A . PASS END=226924255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr1 226924256 . T . PASS END=226924266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 226924267 . G . PASS END=226924287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,790:0,63,255:23,0 chr1 226924288 . G . PASS END=226924288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 226924289 . G . PASS END=226924291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 226924292 . C . PASS END=226924292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 226924293 . T . PASS END=226924310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr1 226924311 . C . PASS END=226924400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:14:0,40,468:0,40,255:19,0 chr1 226924401 . A . PASS END=226924410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,540:0,32,255:13,0 chr1 226924411 . C . PASS END=226924416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 226924417 . G . PASS END=226924417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 226924418 . C . PASS END=226924423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 226924424 . A . PASS END=226924427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 226924428 . T . PASS END=226924443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,499:0,45,255:15,0 chr1 226924444 . C . PASS END=226924450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226924451 . G . PASS END=226924451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 226924452 . A . PASS END=226924462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 226924463 . C . PASS END=226924476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 226924477 . G . PASS END=226924492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr1 226924493 . G . PASS END=226924501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr1 226924502 . T . PASS END=226924502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 226924503 . C . PASS END=226924520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 226924521 . T . PASS END=226924521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 226924522 . G . PASS END=226924525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 226924526 . T . PASS END=226924526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 226924527 . C . PASS END=226924542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr1 226924543 . C . PASS END=226924543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 226924544 . C . PASS END=226924548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 226924549 . G . PASS END=226924550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 226924551 . C . PASS END=226924602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,576:0,41,255:18,0 chr1 226924603 . G . PASS END=226924606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226924607 . G . PASS END=226924607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 226924608 . A . PASS END=226924608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226924609 . C . PASS END=226924609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 226924610 . T . PASS END=226924612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 226924613 . T . PASS END=226924613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr1 226924614 . G . PASS END=226924617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 226924618 . C . PASS END=226924618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr1 226924619 . G . PASS END=226924619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 226924620 . G . PASS END=226924620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 226924621 . A . PASS END=226924621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 226924622 . A . PASS END=226924622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,368:0,8,255:8,0 chr1 226924623 . G . PASS END=226924624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 226924625 . G . PASS END=226924627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 226924628 . A . PASS END=226924628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:11,0 chr1 226924629 . C . LowGQ END=226924629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,365:5,0,255:10,0 chr1 226924630 . G . PASS END=226924633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr1 226924634 . A . PASS END=226924635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:11,0 chr1 226924636 . G . PASS END=226924638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 226924639 . G . PASS END=226924639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:10,0 chr1 226924640 . A . PASS END=226924640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 226924641 . G . LowGQ END=226924641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,357:5,0,255:10,0 chr1 226924642 . C . PASS END=226924643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 226924644 . A . LowGQ END=226924645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,271:11,0,255:9,0 chr1 226924646 . C . PASS END=226924690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 226924691 . G . PASS END=226924695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226924696 . T . PASS END=226924697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226924698 . G . PASS END=226924702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226924703 . G . PASS END=226924706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226924707 . C . PASS END=226924707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226924708 . T . PASS END=226924715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 226924716 . G . PASS END=226924716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 226924717 . C . PASS END=226924723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr1 226924724 . T . PASS END=226924729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 226924730 . T . PASS END=226924730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 226924731 . C . PASS END=226924739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226924740 . G . PASS END=226924741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 226924742 . T . PASS END=226924743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 226924744 . T . PASS END=226924744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 226924745 . G . PASS END=226924753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 226924754 . G . PASS END=226924771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 226924772 . T . PASS END=226924775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr1 226924776 . C . PASS END=226924776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 226924777 . T . PASS END=226924792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 226924793 . C . PASS END=226924794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 226924795 . G . PASS END=226924801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr1 226924802 . A . PASS END=226924803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 226924804 . A . PASS END=226924818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,211:0,21,211:7,0 chr1 226924819 . A . PASS END=226924828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr1 226924829 . G . LowGQ END=226924874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,0:7:0:6:0,0,0:0,18,202:3,0 chr1 226924875 . ACTGCCGCTG A, 62.54 PASS DP=7;MQ=250.00;FractionInformativeReads=0.714 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,5,0:1.000,0.000:5:0,1,0:0,4,0:13:94,15,0,225,15,225:173,0,56:0,6:6.2536e+01,1.2536e+01,2.4932e-01,2.2850e+02,4.7306e+01,2.3150e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,2,3:0,0,2,3:226924875 chr1 226924876 . C . LowGQ END=226924885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,6:7:0:5:0,0,0:185,0,0:5,6 chr1 226924886 . T . PASS END=226924890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 226924891 . C . LowGQ END=226924891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 226924892 . T . PASS END=226924905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 226924906 . C . PASS END=226924908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 226924909 . C T, 0.08 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=-0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:6,1,0:0.143,0.000:7:1,0,0:5,1,0:17:18,0,50,36,215,250:18,0,212:6,0:8.4565e-02,1.7149e+01,7.0149e+01,5.2913e+01,2.6653e+02,2.7053e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,0,1:2,4,1,0:226924875 chr1 226924910 . T . PASS END=226924924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 226924925 . G . PASS END=226924930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 226924931 . T . LowGQ END=226924931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 226924932 . C . PASS END=226924938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 226924939 . C . PASS END=226924946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 226924947 . G . PASS END=226924957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr1 226924958 . C . PASS END=226924958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 226924959 . C . PASS END=226924959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 226924960 . T . PASS END=226924960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 226924961 . C . PASS END=226924968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 226924969 . A . PASS END=226924969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 226924970 . G . PASS END=226924977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,296:0,24,255:9,0 chr1 226924978 . G . PASS END=226924979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 226924980 . T . PASS END=226924980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 226924981 . G . PASS END=226925010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:12,0 chr1 226925011 . G . PASS END=226925011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 226925012 . G . PASS END=226925013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 226925014 . C . PASS END=226925014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 226925015 . T . PASS END=226925018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 226925019 . A . PASS END=226925019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 226925020 . A . PASS END=226925020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 226925021 . C . PASS END=226925021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 226925022 . G . PASS END=226925023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 226925024 . T . PASS END=226925024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr1 226925025 . G . PASS END=226925026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr1 226925027 . C . PASS END=226925028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 226925029 . G . PASS END=226925030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 226925031 . G . PASS END=226925037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 226925038 . A . PASS END=226925040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 226925041 . G . PASS END=226925042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 226925043 . C . PASS END=226925043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 226925044 . C . PASS END=226925044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 226925045 . T . PASS END=226925045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 226925046 . C . PASS END=226925046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 226925047 . C . PASS END=226925056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:38:15:0,38,585:0,38,255:14,0 chr1 226925057 . G . PASS END=226925057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 226925058 . G . PASS END=226925075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr1 226925076 . G . PASS END=226925085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 226925086 . C . PASS END=226925086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 226925087 . C . PASS END=226925101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 226925102 . T . PASS END=226925118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 226925119 . A . PASS END=226925119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 226925120 . T . PASS END=226925125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 226925126 . C . PASS END=226925132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 226925133 . A . PASS END=226925133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,272:0,13,255:8,0 chr1 226925134 . T . PASS END=226925142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 226925143 . T . PASS END=226925157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:6:0,10,180:0,10,202:6,0 chr1 226925158 . A . PASS END=226925159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:6:0,6,90:0,18,217:2,0 chr1 227059034 . C . PASS END=227059034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 227063088 . C . PASS END=227063088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 227063128 . A . PASS END=227063128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1295:0,105,255:35,0 chr1 227063136 . G . PASS END=227063136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1313:0,108,255:36,0 chr1 227063190 . T . PASS END=227063190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 227068347 . A . PASS END=227068349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:90:56:0,90,1686:0,90,255:40,0 chr1 227068350 . T . PASS END=227068350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:77:57:0,77,1796:0,77,255:40,0 chr1 227068351 . T . PASS END=227068425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:94:53:0,94,1800:0,94,255:40,0 chr1 227069589 . G . PASS END=227069639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1047:0,81,255:39,0 chr1 227069640 . A . PASS END=227069676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1349:0,87,255:39,0 chr1 227069677 . T C, 169.94 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,21,0:0,20,0:120:208,123,0,1560,123,1560:255,123,0:0,0:1.6994e+02,1.1994e+02,0.0000e+00,4.5000e+02,1.5471e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,21:0,0,20,21 chr1 227069678 . G . PASS END=227069704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,93,255:36,0 chr1 227069705 . G . PASS END=227069730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 227069731 . A . PASS END=227069736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 227069737 . C T, 108.36 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,11,0:0,10,0:58:146,61,0,689,61,689:255,63,0:0,0:1.0836e+02,5.8359e+01,6.2126e-06,4.5000e+02,9.3129e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,7:0,0,10,11 chr1 227069738 . A . PASS END=227069745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr1 227069746 . G . PASS END=227069749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 227071406 . A . PASS END=227071414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 227071415 . G . PASS END=227071415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 227071416 . A . PASS END=227071416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:24,0 chr1 227071417 . G . PASS END=227071439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,939:0,62,255:26,0 chr1 227071440 . A . PASS END=227071443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 227071444 . T . PASS END=227071449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr1 227071450 . C . PASS END=227071450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227071451 . T . PASS END=227071451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:26,0 chr1 227071452 . A . PASS END=227071452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 227071453 . T . PASS END=227071453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr1 227071454 . G . PASS END=227071467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr1 227071468 . T . PASS END=227071468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr1 227071469 . C . PASS END=227071470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:32,0 chr1 227071471 . C . PASS END=227071471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1097:0,68,255:31,0 chr1 227071472 . G . PASS END=227071487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1164:0,83,255:33,0 chr1 227071488 . T . PASS END=227071509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1150:0,80,255:32,0 chr1 227071510 . A . PASS END=227071510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr1 227071511 . T . PASS END=227071519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1085:0,80,255:29,0 chr1 227071520 . A . PASS END=227071520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 227071521 . A . PASS END=227071524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 227071525 . C T, 138.45 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,21,0:0,10,0:88:176,91,0,276,276,276:255,96,0:0,0:1.3845e+02,8.8446e+01,0.0000e+00,2.7322e+02,3.0799e+02,2.7623e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,18:0,0,15,16 chr1 227071526 . G . PASS END=227071529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 227071530 . T . PASS END=227071530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:29,0 chr1 227071531 . C . PASS END=227071533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 227071534 . G . PASS END=227071534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr1 227071535 . C . PASS END=227071542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1194:0,83,255:30,0 chr1 227071543 . G . PASS END=227071544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 227071545 . C . PASS END=227071547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1169:0,80,255:27,0 chr1 227071548 . T . PASS END=227071548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr1 227071549 . C . PASS END=227071551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 227071552 . T . PASS END=227071554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:68:28:0,68,1014:0,68,255:27,0 chr1 227071555 . G . PASS END=227071555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:26,0 chr1 227071556 . T . PASS END=227071558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr1 227071559 . A . PASS END=227071559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227071560 . T . PASS END=227071560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 227071561 . G . PASS END=227071561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr1 227071562 . A . PASS END=227071562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 227071563 . T . PASS END=227071563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:28,0 chr1 227071564 . C . PASS END=227071565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 227071566 . T . PASS END=227071566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 227071567 . G . PASS END=227071567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 227071568 . G . PASS END=227071568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 227071569 . T . PASS END=227071570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 227071571 . G . PASS END=227071571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 227071572 . T . PASS END=227071573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 227071574 . G . PASS END=227071574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,994:0,21,255:28,0 chr1 227071575 . C . PASS END=227071583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1031:0,71,255:26,0 chr1 227071584 . A . PASS END=227071584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,837:0,51,255:24,0 chr1 227071585 . G . PASS END=227071585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:23,0 chr1 227071586 . T . PASS END=227071586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,892:0,37,255:22,0 chr1 227071587 . C . PASS END=227071587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 227071588 . T . PASS END=227071588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 227071589 . G . PASS END=227071589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 227071590 . T . PASS END=227071593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,833:0,61,255:24,0 chr1 227071594 . C . PASS END=227071605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:46:21:0,46,706:0,46,255:19,0 chr1 227071606 . G . PASS END=227071607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:30:21:0,30,651:0,30,255:15,0 chr1 227071608 . A . PASS END=227071608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,641:0,16,255:13,0 chr1 227071609 . G . PASS END=227071610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,629:0,30,255:14,0 chr1 227071611 . A . PASS END=227071611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,637:0,16,255:14,0 chr1 227071612 . T . LowGQ END=227071612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,566:31,0,255:13,0 chr1 227071613 . G . PASS END=227071614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 227071615 . A . PASS END=227071616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:14,0 chr1 227071617 . A . PASS END=227071617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,402:0,1,255:11,0 chr1 227071618 . G . PASS END=227071618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 227071619 . C . LowGQ END=227071619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,396:21,0,255:12,0 chr1 227071620 . T . PASS END=227071620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 227073239 . C . PASS END=227073356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,970:0,81,255:39,0 chr1 227073357 . C . PASS END=227073372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1008:0,71,255:26,0 chr1 227073373 . G . PASS END=227073380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 227075792 . T . PASS END=227075859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:40:0,104,1435:0,104,255:40,0 chr1 227076530 . G . PASS END=227076539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1063:0,84,255:31,0 chr1 227076540 . A . PASS END=227076540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 227076541 . A . PASS END=227076672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:31:0,90,1121:0,90,255:40,0 chr1 227076673 . C . PASS END=227076673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1168:0,69,255:32,0 chr1 227076674 . G . PASS END=227076750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1155:0,80,255:38,0 chr1 227077736 . A . PASS END=227077835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,986:0,90,255:40,0 chr1 227078979 . C . PASS END=227078979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 227078980 . T . PASS END=227078985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 227078986 . G . PASS END=227078992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,415:0,36,255:13,0 chr1 227078993 . A . PASS END=227078997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr1 227078998 . T . PASS END=227078998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 227078999 . G . PASS END=227079041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,443:0,33,255:13,0 chr1 227079042 . T . PASS END=227079042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 227079043 . C . PASS END=227079043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 227079044 . C . PASS END=227079044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 227079045 . C . PASS END=227079062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 227079444 . A . PASS END=227079446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1265:0,92,255:36,0 chr1 227079447 . A . PASS END=227079447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1087:0,52,255:33,0 chr1 227079448 . A . PASS END=227079534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,104,1277:0,104,255:40,0 chr1 227079535 . A . PASS END=227079535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:34,0 chr1 227079536 . G . PASS END=227079536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 227079537 . A . PASS END=227079537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:33,0 chr1 227079538 . G . PASS END=227079545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1302:0,81,255:34,0 chr1 227081708 . G . PASS END=227081713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,803:0,69,255:25,0 chr1 227081714 . T . PASS END=227081714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 227081715 . G . PASS END=227081722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr1 227081723 . G . PASS END=227081727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 227081728 . G . PASS END=227081736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr1 227081737 . A . PASS END=227081740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 227081741 . T . PASS END=227081741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 227081742 . C . PASS END=227081744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 227081745 . C . PASS END=227081745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr1 227081746 . A . PASS END=227081747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 227081748 . T . PASS END=227081748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 227081749 . G . PASS END=227081751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 227081752 . C . PASS END=227081758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr1 227081759 . G . PASS END=227081759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227081760 . C . PASS END=227081762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 227081763 . G . PASS END=227081764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227081765 . C . PASS END=227081765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,937:0,29,255:23,0 chr1 227081766 . G . PASS END=227081800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 227081801 . T . PASS END=227081803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,798:0,50,255:19,0 chr1 227081804 . C . PASS END=227081804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227081805 . C . PASS END=227081812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr1 227081813 . T . PASS END=227081823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 227081824 . A . PASS END=227081826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,41,255:13,0 chr1 227083125 . G . PASS END=227083125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 227083126 . G . PASS END=227083127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227083128 . T . PASS END=227083128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 227083129 . T . PASS END=227083181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1041:0,84,255:35,0 chr1 227083182 . C . PASS END=227083182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr1 227083183 . C . PASS END=227083267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1125:0,80,255:35,0 chr1 227083268 . G . PASS END=227083268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:33,0 chr1 227083269 . C . PASS END=227083280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1421:0,104,255:36,0 chr1 227083352 . T . PASS END=227083352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 227083383 . C . PASS END=227083383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 227083400 . G . PASS END=227083400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 227083412 . T . PASS END=227083412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 227083490 . G . PASS END=227083490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 227083564 . T . PASS END=227083564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 227083586 . G . PASS END=227083586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 227083657 . C . PASS END=227083658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,150,255:40,0 chr1 227083759 . G . PASS END=227083759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 227127973 . C . PASS END=227127973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 227127997 . A . PASS END=227127997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 227128035 . C . PASS END=227128035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 227149087 . A . PASS END=227149096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,730:0,63,255:22,0 chr1 227149097 . T . PASS END=227149097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr1 227149098 . A . PASS END=227149124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,738:0,66,255:25,0 chr1 227149125 . A . PASS END=227149125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 227149126 . G . PASS END=227149134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:26,0 chr1 227149135 . A . PASS END=227149173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,972:0,80,255:32,0 chr1 227149174 . T . PASS END=227149196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 227149197 . C . PASS END=227149197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 227149198 . A . PASS END=227149202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 227149203 . G . PASS END=227149203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 227149204 . G . PASS END=227149204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 227149205 . C . PASS END=227149205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr1 227149206 . C . PASS END=227149206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:17,0 chr1 227149207 . A . PASS END=227149225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:18,0 chr1 227149226 . C . PASS END=227149226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,584:0,18,255:13,0 chr1 227149227 . T . PASS END=227149227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 227149228 . G . PASS END=227149241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,499:0,45,255:15,0 chr1 227149242 . C . PASS END=227149243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 227149244 . T . PASS END=227149254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 227149255 . A . PASS END=227149261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 227149262 . A . PASS END=227149262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:9,0 chr1 227149263 . G . PASS END=227149263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr1 227152701 . G . PASS END=227152765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:21:0,61,709:0,61,255:26,0 chr1 227152766 . C . PASS END=227152767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227152768 . C . PASS END=227152780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,945:0,65,255:26,0 chr1 227152781 . A . PASS END=227152781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 227152782 . G . PASS END=227152811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 227152812 . T . PASS END=227152814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 227152815 . G . PASS END=227152815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:18,0 chr1 227152816 . C . PASS END=227152819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 227152820 . C . PASS END=227152820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:18,0 chr1 227152821 . G . PASS END=227152824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr1 227152825 . A . PASS END=227152829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 227152830 . G . PASS END=227152863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 227152864 . G . PASS END=227152872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr1 227152873 . C . PASS END=227152902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:18,0 chr1 227152903 . A . PASS END=227152903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:15,0 chr1 227152904 . A . PASS END=227152916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,692:0,54,255:19,0 chr1 227152917 . G . PASS END=227152928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,713:0,60,255:22,0 chr1 227152929 . T . PASS END=227152954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,692:0,47,255:19,0 chr1 227152955 . G . PASS END=227152960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr1 227152961 . T . PASS END=227152961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:19,0 chr1 227152962 . G . PASS END=227152963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 227152964 . A . PASS END=227152972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr1 227152973 . A . PASS END=227152973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227152974 . G . PASS END=227152974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:18,0 chr1 227152975 . A . PASS END=227152977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 227152978 . C . PASS END=227152982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227152983 . T . PASS END=227152983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:19,0 chr1 227152984 . C . PASS END=227152985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr1 227152986 . G . PASS END=227152986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 227152987 . C . PASS END=227152988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227152989 . A . PASS END=227152989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 227152990 . T . PASS END=227152990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227152991 . G . PASS END=227152991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:18,0 chr1 227152992 . G . PASS END=227152992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227152993 . G . PASS END=227152993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 227152994 . C . PASS END=227152996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227152997 . T . PASS END=227152997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 227152998 . C . PASS END=227153000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227153001 . C . PASS END=227153001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 227153002 . G . PASS END=227153009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 227153010 . T . PASS END=227153010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 227153011 . T . PASS END=227153018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 227153019 . G . PASS END=227153019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 227153020 . A . PASS END=227153021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227153022 . C . PASS END=227153022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 227153023 . A . PASS END=227153023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227153024 . A . PASS END=227153025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,751:0,50,255:19,0 chr1 227153026 . C . PASS END=227153027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227153028 . C . PASS END=227153029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 227153030 . T . PASS END=227153030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,667:0,16,255:17,0 chr1 227153031 . G . PASS END=227153031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227153032 . T . PASS END=227153032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 227153033 . T . PASS END=227153033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr1 227153034 . G . PASS END=227153036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227153037 . G . PASS END=227153038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:16,0 chr1 227153039 . C . PASS END=227153046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,55,255:20,0 chr1 227153047 . C . PASS END=227153055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 227153056 . T . PASS END=227153056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 227153057 . T . PASS END=227153057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 227153058 . G . PASS END=227153060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 227153061 . A . PASS END=227153111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 227153372 . C . PASS END=227153438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:25,0 chr1 227153441 . A . PASS END=227153441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 227163782 . A . PASS END=227163836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:43:0,88,1485:0,88,255:40,0 chr1 227163837 . G . PASS END=227163875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:42:0,83,1454:0,83,255:40,0 chr1 227163876 . C . LowGQ END=227163876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,23:52:0:52:0,0,285:255,0,255:20,0 chr1 227163877 . G . PASS END=227163883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,129,255:40,0 chr1 227163884 . C . LowGQ END=227163884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,25:53:0:53:0,0,191:255,0,255:28,0 chr1 227163885 . G . PASS END=227163923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:89:53:0,89,1800:0,89,255:40,0 chr1 227163924 . C . PASS END=227164239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:81:29:0,81,1180:0,83,255:40,1 chr1 227164240 . C . PASS END=227164271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr1 227164272 . C . PASS END=227164312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,637:0,43,255:19,0 chr1 227165149 . G . PASS END=227165151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227165152 . C . PASS END=227165152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 227165153 . T . PASS END=227165158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 227165159 . T . PASS END=227165159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr1 227165160 . G . PASS END=227165165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 227165166 . G . PASS END=227165166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 227165167 . G . PASS END=227165177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr1 227165178 . A . PASS END=227165178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 227165179 . C . PASS END=227165199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 227165200 . A . PASS END=227165200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:28,0 chr1 227165201 . G . PASS END=227165206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 227165207 . G . PASS END=227165224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 227165231 . C . PASS END=227165231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 227169728 . G . PASS END=227169750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr1 227169751 . A . PASS END=227169751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 227169752 . G . PASS END=227169763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 227169764 . C . PASS END=227169765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 227169766 . G . PASS END=227169776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 227169777 . A . PASS END=227169777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:26,0 chr1 227169778 . G . PASS END=227169778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1053:0,38,255:25,0 chr1 227169779 . A . PASS END=227169780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:26,0 chr1 227169781 . C . PASS END=227169786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 227169787 . G . PASS END=227169791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227169792 . C . PASS END=227169816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,992:0,65,255:26,0 chr1 227169817 . G . PASS END=227169817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr1 227169818 . C . PASS END=227169827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 227169828 . G . PASS END=227169828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 227169829 . G . PASS END=227169834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 227169835 . A . PASS END=227169835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 227169836 . T . PASS END=227169840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:21,0 chr1 227169841 . A . PASS END=227169850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:19,0 chr1 227170379 . A . PASS END=227170425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:31:0,83,1149:0,83,255:38,0 chr1 227170426 . C . PASS END=227170426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1325:0,75,255:37,0 chr1 227170427 . G . PASS END=227170429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1380:0,98,255:37,0 chr1 227170430 . A . PASS END=227170430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 227170431 . G . PASS END=227170433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1402:0,98,255:33,0 chr1 227170434 . C . PASS END=227170434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr1 227170435 . G . PASS END=227170442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1305:0,95,255:33,0 chr1 227170443 . C . PASS END=227170443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1216:0,58,255:29,0 chr1 227170444 . A . PASS END=227170455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:30,0 chr1 227170456 . C . PASS END=227170456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:25,0 chr1 227170457 . A . PASS END=227170458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:51:30:0,51,1030:0,51,255:25,0 chr1 227170459 . A . PASS END=227170464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1053:0,71,255:26,0 chr1 227170595 . A . PASS END=227170604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr1 227170605 . A . PASS END=227170606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr1 227170607 . A . PASS END=227170607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:26,0 chr1 227170608 . A . PASS END=227170612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr1 227170613 . C . PASS END=227170613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr1 227170614 . T . PASS END=227170614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr1 227170615 . G . PASS END=227170615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 227170616 . G . PASS END=227170623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr1 227170624 . C . PASS END=227170624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 227170625 . T . PASS END=227170629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227170630 . G . PASS END=227170631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 227170632 . A . PASS END=227170634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 227170635 . A . PASS END=227170635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 227170636 . G . PASS END=227170638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227170639 . G . PASS END=227170639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 227170640 . G . PASS END=227170640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227170641 . A . PASS END=227170641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 227170642 . A . PASS END=227170643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227170644 . A . PASS END=227170644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 227170645 . C . PASS END=227170650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1164:0,93,255:31,0 chr1 227170651 . G . PASS END=227170651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:27,0 chr1 227170652 . G . PASS END=227170672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:30,0 chr1 227170673 . T . PASS END=227170673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 227170674 . C . PASS END=227170691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1158:0,80,255:32,0 chr1 227170692 . T . PASS END=227170692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 227170693 . G . PASS END=227170696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227170697 . C . PASS END=227170697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 227170698 . G . PASS END=227170698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 227170699 . A . PASS END=227170701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 227170702 . G . PASS END=227170702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 227170703 . A . PASS END=227170704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 227170705 . G . PASS END=227170707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:26,0 chr1 227170708 . C . PASS END=227170709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr1 227170710 . G . PASS END=227170710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr1 227170711 . C . PASS END=227170714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:25,0 chr1 227170715 . G . PASS END=227170715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 227170716 . A . PASS END=227170735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,65,255:22,0 chr1 227171250 . C . PASS END=227171250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 227171253 . T . PASS END=227171259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:26,0 chr1 227171260 . G . PASS END=227171260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 227171261 . C . PASS END=227171261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 227171262 . G . PASS END=227171272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr1 227171273 . C . PASS END=227171273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 227171274 . A . PASS END=227171277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 227171278 . A . PASS END=227171278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 227171279 . C . PASS END=227171280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 227171281 . G . PASS END=227171283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr1 227171284 . A . PASS END=227171306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,967:0,87,255:30,0 chr1 227171307 . T . PASS END=227171307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 227171308 . T . PASS END=227171329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1111:0,90,255:30,0 chr1 227171330 . A . PASS END=227171330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:28,0 chr1 227171331 . G . PASS END=227171334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 227171452 . C . PASS END=227171452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227171460 . A . PASS END=227171460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 227171462 . G . PASS END=227171463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 227171464 . C . PASS END=227171464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227171465 . T . PASS END=227171465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 227171466 . G . PASS END=227171467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227171468 . T . PASS END=227171470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 227171471 . C . PASS END=227171473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227171474 . A . PASS END=227171474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 227171475 . G . PASS END=227171475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227171476 . C . PASS END=227171476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 227171477 . A . PASS END=227171480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 227171481 . G . PASS END=227171481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr1 227171482 . A . PASS END=227171486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 227171487 . C . PASS END=227171487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 227171488 . G . PASS END=227171488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,945:0,29,255:25,0 chr1 227171489 . T . PASS END=227171489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:25,0 chr1 227171490 . G . PASS END=227171503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,945:0,62,255:26,0 chr1 227171504 . T . PASS END=227171504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 227171505 . G . PASS END=227171509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 227171510 . T . PASS END=227171510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr1 227171511 . G . PASS END=227171514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 227171515 . T . PASS END=227171517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 227171518 . G . PASS END=227171518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 227171519 . A . PASS END=227171519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 227171520 . C . PASS END=227171522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227171523 . C . PASS END=227171545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:18:0,40,629:0,40,255:18,0 chr1 227171546 . G . PASS END=227171546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 227171547 . C . PASS END=227171549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:18,0 chr1 227171550 . G . PASS END=227171550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:14,0 chr1 227171551 . T . PASS END=227171553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 227171554 . A . PASS END=227171554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:14,0 chr1 227171555 . G . PASS END=227171555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 227171566 . C . PASS END=227171566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 227171786 . C . PASS END=227171786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 227171795 . G . PASS END=227171801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,706:0,47,255:20,0 chr1 227171802 . C . PASS END=227171808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227171809 . G . PASS END=227171810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:19,0 chr1 227171811 . C . PASS END=227171811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227171812 . A . PASS END=227171813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 227171814 . C . PASS END=227171820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 227171821 . T . PASS END=227171821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 227171822 . C . PASS END=227171830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:24,0 chr1 227171831 . T . PASS END=227171831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:22,0 chr1 227171832 . G . PASS END=227171833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 227171834 . G . PASS END=227171844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 227171845 . A . PASS END=227171845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr1 227171846 . G . PASS END=227171846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 227171847 . C . PASS END=227171847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 227171848 . T . PASS END=227171875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 227171876 . G . PASS END=227171876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 227171877 . C . PASS END=227171888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr1 227171889 . T . PASS END=227171889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 227171890 . T . PASS END=227171911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,825:0,62,255:23,0 chr1 227171912 . G . PASS END=227171912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 227171913 . C . PASS END=227171916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 227171917 . G . PASS END=227171917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 227171918 . C . PASS END=227171929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,878:0,72,255:24,0 chr1 227171930 . G . PASS END=227171931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:19,0 chr1 227171932 . A . PASS END=227171932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 227171933 . C . PASS END=227171933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 227171934 . G . PASS END=227171934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 227171935 . A . PASS END=227171936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 227171938 . T . PASS END=227171938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 227171948 . C . PASS END=227171948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 227172236 . G . PASS END=227172236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 227172249 . A . PASS END=227172357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,140,255:40,0 chr1 227172577 . G . PASS END=227172580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 227172581 . C . PASS END=227172582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr1 227172583 . C . PASS END=227172589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 227172590 . A . PASS END=227172590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:28,0 chr1 227172591 . T . PASS END=227172597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 227172598 . G . PASS END=227172598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 227172599 . C . PASS END=227172609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 227172610 . T . PASS END=227172610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 227172611 . A . PASS END=227172611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr1 227172612 . T . PASS END=227172613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227172614 . A . PASS END=227172614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 227172615 . C . PASS END=227172618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227172619 . T . PASS END=227172625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:24,0 chr1 227172626 . C . PASS END=227172626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:22,0 chr1 227172627 . C . PASS END=227172632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 227172633 . C . PASS END=227172642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,720:0,47,255:19,0 chr1 227172649 . G . PASS END=227172649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 227172955 . A . PASS END=227172963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 227172964 . G . PASS END=227172966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 227172967 . G . PASS END=227172981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,853:0,66,255:26,0 chr1 227172982 . A . PASS END=227172982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr1 227172983 . G . PASS END=227172990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,911:0,68,255:26,0 chr1 227172991 . G . PASS END=227173000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 227173001 . A . PASS END=227173003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 227173004 . C . PASS END=227173007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227173008 . A . PASS END=227173008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 227173009 . G . PASS END=227173027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:29,0 chr1 227173028 . G . PASS END=227173028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 227173029 . C . PASS END=227173031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227173032 . C . PASS END=227173041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,984:0,68,255:26,0 chr1 227173055 . C . PASS END=227173055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 227174154 . G . PASS END=227174163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr1 227174164 . A . PASS END=227174164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,735:0,22,255:21,0 chr1 227174165 . C . PASS END=227174169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 227174170 . A . PASS END=227174170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 227174171 . C . PASS END=227174172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 227174173 . T . PASS END=227174173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 227174174 . G . PASS END=227174187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,892:0,72,255:26,0 chr1 227174188 . T . PASS END=227174190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 227174191 . T . PASS END=227174191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 227174192 . G . PASS END=227174202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1066:0,87,255:30,0 chr1 227174203 . T . PASS END=227174203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 227174204 . C . PASS END=227174209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:33,0 chr1 227174210 . T . PASS END=227174210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 227174211 . G . PASS END=227174213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:33,0 chr1 227174214 . G . PASS END=227174214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:31,0 chr1 227174215 . A . PASS END=227174221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1186:0,86,255:32,0 chr1 227174222 . T . PASS END=227174222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:30,0 chr1 227174223 . G . PASS END=227174228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:33,0 chr1 227174229 . G . PASS END=227174229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:30,0 chr1 227174230 . G . PASS END=227174249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:32,0 chr1 227174250 . A . PASS END=227174250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:29,0 chr1 227174251 . A . PASS END=227174253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227174254 . T . PASS END=227174254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 227174255 . C . PASS END=227174255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 227174256 . C . PASS END=227174256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 227174257 . A . PASS END=227174257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,939:0,24,255:29,0 chr1 227174258 . C . PASS END=227174274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1111:0,80,255:34,0 chr1 227174275 . T . PASS END=227174275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr1 227174276 . G . PASS END=227174303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1156:0,83,255:33,0 chr1 227174304 . G . PASS END=227174305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1088:0,44,255:30,0 chr1 227174306 . G . PASS END=227174330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1149:0,82,255:31,0 chr1 227174331 . A . PASS END=227174331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:28,0 chr1 227174332 . T . PASS END=227174338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:31,0 chr1 227174339 . C . PASS END=227174339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1050:0,46,255:31,0 chr1 227174340 . T . PASS END=227174386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1166:0,96,255:33,0 chr1 227174387 . C . PASS END=227174397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,81,255:24,0 chr1 227174398 . A . PASS END=227174438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 227174508 . A . PASS END=227174508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 227174548 . G . PASS END=227174548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 227174588 . C . PASS END=227174588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 227174622 . G . PASS END=227174622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 227174672 . G . PASS END=227174672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 227174690 . A . PASS END=227174690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 227174764 . C . PASS END=227174764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 227174787 . G . PASS END=227174787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 227174839 . A . PASS END=227174839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,102,1530:0,147,255:34,0 chr1 227174863 . G . PASS END=227174863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 227174935 . C . PASS END=227174935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 227175008 . T . PASS END=227175008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 227175050 . C . PASS END=227175051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 227175069 . C . PASS END=227175069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 227175131 . G . PASS END=227175131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227175165 . C . PASS END=227175165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 227175197 . T . PASS END=227175197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 227175199 . G . PASS END=227175199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 227181969 . T . PASS END=227181973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,953:0,72,255:25,0 chr1 227181974 . G . PASS END=227181974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr1 227181975 . G . PASS END=227181980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 227181981 . G . PASS END=227181997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1016:0,80,255:31,0 chr1 227181998 . T . PASS END=227181998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:30,0 chr1 227181999 . C . PASS END=227182035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1188:0,83,255:36,0 chr1 227182036 . G . PASS END=227182036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:31,0 chr1 227182037 . G . PASS END=227182054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1294:0,89,255:34,0 chr1 227182055 . G . PASS END=227182077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:25:0,68,1030:0,68,255:26,0 chr1 227182078 . G . PASS END=227182079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr1 227182080 . A . PASS END=227182088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 227182089 . A . PASS END=227182090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 227182091 . A . PASS END=227182093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 227182094 . C . PASS END=227182094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 227182095 . A . PASS END=227182095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 227182096 . G . PASS END=227182100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:17,0 chr1 227182524 . C . PASS END=227182537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:23,0 chr1 227182538 . C . PASS END=227182543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 227182544 . C . PASS END=227182546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 227182547 . G . PASS END=227182556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 227182557 . T . PASS END=227182574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1027:0,84,255:31,0 chr1 227182575 . A G, 140.30 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,13,0:0,18,0:90:178,93,0,1202,93,1202:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,15:0,0,24,7 chr1 227182576 . G . PASS END=227182612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:32,0 chr1 227182613 . G . PASS END=227182617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1092:0,74,255:26,0 chr1 227182618 . T . PASS END=227182618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:24,0 chr1 227182619 . T . PASS END=227182620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 227182621 . G . PASS END=227182639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:29,0 chr1 227182640 . A . PASS END=227182640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:28,0 chr1 227182641 . G . PASS END=227182641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 227182642 . A . PASS END=227182642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 227182643 . A . PASS END=227182656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1003:0,84,255:29,0 chr1 227182657 . G . PASS END=227182676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 227182677 . T . PASS END=227182681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,53,255:18,0 chr1 227192618 . T . PASS END=227192810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:34:0,81,1213:0,86,255:40,0 chr1 227192811 . T . PASS END=227192812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 227198579 . C . PASS END=227198764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:40:0,105,1504:0,105,255:40,0 chr1 227200810 . T . PASS END=227200827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,248,255:40,0 chr1 227203781 . C . PASS END=227203898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:43:0,80,1476:0,80,255:40,0 chr1 227204628 . C . PASS END=227204751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:44:0,99,1479:0,99,255:40,0 chr1 227210964 . C . PASS END=227211048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:61:0,120,1800:0,162,255:40,0 chr1 227213756 . C . PASS END=227213853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:52:0,120,1800:0,128,255:40,0 chr1 227216358 . A . PASS END=227216454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:31:0,90,1150:0,91,255:40,0 chr1 227216455 . A . PASS END=227216455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1268:0,78,255:33,0 chr1 227216456 . T . PASS END=227216951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:35:0,86,1213:0,86,255:40,0 chr1 227218109 . C . PASS END=227218128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:56:0,120,1800:0,141,255:40,0 chr1 227218129 . A . PASS END=227218171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:77:0,120,1800:0,191,255:40,0 chr1 227218999 . C . PASS END=227219191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1057:0,80,255:40,0 chr1 227219192 . T . PASS END=227219192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 227219193 . G . PASS END=227219205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 227219206 . A . PASS END=227219206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 227219207 . A . PASS END=227219207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227219208 . G . PASS END=227219215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr1 227221035 . C . PASS END=227221116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:60:0,120,1800:0,164,255:40,0 chr1 227222356 . C . PASS END=227222464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1224:0,83,255:40,0 chr1 227222465 . A . PASS END=227222472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:63:40:0,63,945:0,120,255:24,0 chr1 227222473 . T . PASS END=227222475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:66:40:0,66,990:0,104,255:22,0 chr1 227222476 . A . PASS END=227222485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:45:34:0,45,675:0,86,255:19,0 chr1 227222486 . G . PASS END=227222495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:30:30:0,30,450:0,74,255:11,0 chr1 227223172 . C . PASS END=227223172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:25,0 chr1 227223173 . C . PASS END=227223178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:29,0 chr1 227223179 . T . PASS END=227223179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:28,0 chr1 227223180 . G . PASS END=227223306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:30:0,83,1088:0,83,255:40,0 chr1 227223307 . C . PASS END=227223308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 227227832 . C . PASS END=227227937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,105,1575:0,113,255:40,0 chr1 227235628 . C . PASS END=227235711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,114,1710:0,159,255:40,0 chr1 227239582 . C . PASS END=227239582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 227239583 . T . PASS END=227239583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1533:0,75,255:40,0 chr1 227239584 . T . PASS END=227239686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:38:0,87,1305:0,98,255:40,0 chr1 227247074 . A . PASS END=227247112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,158,255:40,0 chr1 227256355 . G . PASS END=227256402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,185,255:40,0 chr1 227257478 . T . PASS END=227257554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,210,255:40,0 chr1 227259909 . C . PASS END=227260000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,136,255:40,0 chr1 227261565 . C . PASS END=227261567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:41:0,87,1399:0,87,255:39,0 chr1 227261568 . T . PASS END=227261569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:71:42:0,71,1435:0,71,255:40,0 chr1 227261570 . T . PASS END=227261713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,99,1485:0,102,255:40,0 chr1 227261960 . T . PASS END=227262065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:96:46:0,96,1440:0,138,255:40,0 chr1 227268594 . C . PASS END=227268718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:62:0,120,1800:0,156,255:40,0 chr1 227279587 . C . PASS END=227279692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,183,255:40,0 chr1 227288693 . C . PASS END=227288940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:88:35:0,88,1083:0,88,255:40,0 chr1 227300013 . C . PASS END=227300123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,105,1575:0,117,255:40,0 chr1 227300372 . C . PASS END=227300595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,101,1409:0,101,255:40,0 chr1 227300596 . C . PASS END=227300614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:26:0,66,990:0,74,255:26,0 chr1 227307505 . C . PASS END=227307638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,103,1623:0,103,255:40,0 chr1 227316810 . C . PASS END=227316920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:44:0,102,1530:0,130,255:40,0 chr1 227316921 . T . PASS END=227316932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:66:34:0,66,990:0,102,255:26,0 chr1 227327277 . C . PASS END=227327428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:37:0,97,1305:0,97,255:40,0 chr1 227327429 . C . PASS END=227327429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr1 227327430 . G . PASS END=227327438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1318:0,81,255:34,0 chr1 227327439 . G . PASS END=227327439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:30,0 chr1 227327440 . T . PASS END=227327443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1241:0,89,255:34,0 chr1 227330646 . C . PASS END=227330721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:63:0,120,1800:0,166,255:40,0 chr1 227330722 . T . PASS END=227330725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,178,255:40,0 chr1 227333190 . A . PASS END=227333408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:37:0,99,1485:0,111,255:40,0 chr1 227333409 . A . PASS END=227333409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:32,0 chr1 227333410 . G . PASS END=227333438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1294:0,89,255:35,0 chr1 227335060 . T . PASS END=227335260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:96:40:0,96,1332:0,99,255:40,0 chr1 227348244 . C . PASS END=227348324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:42:0,84,1260:0,126,255:40,0 chr1 227348325 . A . PASS END=227348337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:67:27:0,67,865:0,67,255:26,0 chr1 227381487 . C . PASS END=227381635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:41:0,117,1790:0,117,255:40,0 chr1 227387258 . T . PASS END=227387323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:55:0,120,1800:0,149,255:40,0 chr1 227387324 . T . PASS END=227387353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,159,255:40,0 chr1 227400837 . C . PASS END=227400920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:75:0,120,1800:0,225,255:40,0 chr1 227441765 . C . PASS END=227441856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,117,1755:0,141,255:40,0 chr1 227504706 . C . PASS END=227504876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:38:0,81,1215:0,81,255:40,0 chr1 227504877 . C . PASS END=227504883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:28:0,63,990:0,63,255:26,0 chr1 227751396 . A . PASS END=227751425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:33:0,96,1350:0,99,255:39,0 chr1 227834245 . G . PASS END=227834247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr1 227834248 . C . PASS END=227834249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 227834250 . A . PASS END=227834250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 227834251 . C . PASS END=227834259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 227834260 . A . PASS END=227834260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 227834261 . G . PASS END=227834261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 227834262 . T . PASS END=227834274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:16,0 chr1 227834275 . G . PASS END=227834287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr1 227834288 . A . PASS END=227834288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:15,0 chr1 227834289 . G . PASS END=227834293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,582:0,45,255:19,0 chr1 227834294 . G . PASS END=227834295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 227834296 . G . PASS END=227834298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 227834299 . T . PASS END=227834303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 227834304 . G . PASS END=227834304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 227834305 . G . PASS END=227834319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:20,0 chr1 227834320 . A . PASS END=227834325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 227834326 . T . PASS END=227834326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:15,0 chr1 227834327 . A . PASS END=227834356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,599:0,51,255:17,0 chr1 227834357 . A . PASS END=227834362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 227834363 . T . PASS END=227834363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 227834364 . C . PASS END=227834371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 227838693 . A . PASS END=227838777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:71:0,120,1800:0,186,255:40,0 chr1 227842037 . C . PASS END=227842038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 227842039 . A . PASS END=227842039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 227842040 . T . PASS END=227842040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227842041 . T . PASS END=227842041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:29,0 chr1 227842042 . T . PASS END=227842432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:31:0,81,1149:0,82,255:40,0 chr1 227842433 . T . PASS END=227842433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:27,0 chr1 227842434 . T . PASS END=227842440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:29,0 chr1 227842441 . T . PASS END=227842441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:29,0 chr1 227842442 . G . PASS END=227842446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1127:0,82,255:29,0 chr1 227842447 . T . PASS END=227842447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 227842448 . C . PASS END=227842457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1156:0,80,255:28,0 chr1 227842458 . T . PASS END=227842460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 227842461 . C . PASS END=227842462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr1 227842463 . A . PASS END=227842473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1061:0,71,255:25,0 chr1 227842474 . C . PASS END=227842475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 227842476 . T . PASS END=227842477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:29:0,60,1053:0,60,255:28,0 chr1 227842478 . C . PASS END=227842565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1233:0,81,255:40,0 chr1 227842566 . A . PASS END=227842566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:36,0 chr1 227842567 . G . PASS END=227842599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:35:0,96,1244:0,98,255:39,0 chr1 227842600 . G . PASS END=227842601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:60:36:0,60,1251:0,60,255:32,1 chr1 227842602 . C . PASS END=227842610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:35:0,81,1271:0,81,255:32,1 chr1 227842611 . G . PASS END=227842611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:57:36:0,57,1245:0,57,255:32,1 chr1 227842612 . T . PASS END=227842612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:35,0 chr1 227842613 . T . PASS END=227842620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:36:0,84,1175:0,84,255:36,0 chr1 227842621 . C . PASS END=227842621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1326:0,67,255:32,0 chr1 227842622 . T . PASS END=227842625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1395:0,114,255:34,0 chr1 227842626 . A . PASS END=227842628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:36:0,78,1170:0,78,255:31,0 chr1 227842629 . A . PASS END=227842633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,95,255:27,0 chr1 227842634 . A . PASS END=227842637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:33:0,77,1170:0,77,255:26,0 chr1 227842638 . A . PASS END=227842638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:25,0 chr1 227842639 . A . PASS END=227842674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,787:0,61,255:26,0 chr1 227842675 . T . PASS END=227842675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:22,0 chr1 227842676 . G . PASS END=227842682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 227842683 . A . PASS END=227842683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,791:0,58,255:23,0 chr1 227842684 . G . PASS END=227842692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:25,0 chr1 227842693 . A . PASS END=227842693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 227842694 . A . PASS END=227842697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 227842698 . C . PASS END=227842698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 227842699 . T . PASS END=227842703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,71,255:23,0 chr1 227842704 . C . PASS END=227842704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr1 227842705 . C . PASS END=227842705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 227842706 . T . PASS END=227842711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:19,0 chr1 227842712 . A . PASS END=227842712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,731:0,39,255:15,0 chr1 227842713 . A . PASS END=227842733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,762:0,52,255:19,0 chr1 227842734 . A . PASS END=227842734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:16,0 chr1 227842735 . G . PASS END=227842748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:18,0 chr1 227842749 . G . PASS END=227842749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,613:0,30,255:14,0 chr1 227842750 . T . PASS END=227842750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:14,0 chr1 227842751 . G . PASS END=227842763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,652:0,54,255:18,0 chr1 227842764 . C . PASS END=227842765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 227842766 . A . PASS END=227842766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 227842767 . C . PASS END=227842767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 227842768 . G . PASS END=227842787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,590:0,40,255:19,0 chr1 227842788 . C . PASS END=227842788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,643:0,8,255:14,0 chr1 227842789 . C . PASS END=227842795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,714:0,44,255:18,0 chr1 227842796 . G . PASS END=227842797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,613:0,21,255:16,0 chr1 227842798 . C . PASS END=227842799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,720:0,44,255:17,0 chr1 227842800 . T . PASS END=227842800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 227842801 . A . PASS END=227842801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 227842802 . G . LowGQ END=227842802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,482:24,0,255:15,0 chr1 227842803 . G . PASS END=227842803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 227842804 . A . PASS END=227842804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 227842805 . G . LowGQ END=227842805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:16,0 chr1 227842806 . A . PASS END=227842806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr1 227842807 . A . PASS END=227842809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr1 227842810 . C . PASS END=227842810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr1 227842811 . A . PASS END=227842811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr1 227842812 . T . PASS END=227842812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 227842813 . A . PASS END=227842813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 227842814 . C . PASS END=227842818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr1 227842819 . G . PASS END=227842819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227842820 . A . PASS END=227842820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr1 227842821 . G . PASS END=227842822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 227842823 . A . PASS END=227842825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 227842826 . C . PASS END=227842826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,751:0,35,255:21,0 chr1 227842827 . C . PASS END=227842827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 227842828 . T . PASS END=227842828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 227842829 . A . PASS END=227842830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 227842831 . A . PASS END=227842831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 227842832 . A . PASS END=227842832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 227842833 . A . PASS END=227842833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,616:0,49,255:21,0 chr1 227842834 . T . PASS END=227842834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 227842835 . G . PASS END=227842835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:21,0 chr1 227842836 . T . PASS END=227842836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 227842837 . G . PASS END=227842838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 227842839 . A . PASS END=227842839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:19,0 chr1 227842840 . G . PASS END=227842841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227842842 . A . PASS END=227842842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 227842843 . T . PASS END=227842846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 227842847 . G . PASS END=227842847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 227842848 . C . PASS END=227842849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 227842850 . A . PASS END=227842851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:20,0 chr1 227842852 . G . PASS END=227842852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 227842853 . C . PASS END=227842853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:24,0 chr1 227842854 . C . PASS END=227842856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:25,0 chr1 227842857 . T . PASS END=227842859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,962:0,42,255:26,0 chr1 227842860 . A . PASS END=227842860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,878:0,29,255:25,0 chr1 227842861 . C . PASS END=227842863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,994:0,68,255:28,0 chr1 227842864 . T . PASS END=227842864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 227842865 . T . PASS END=227842865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 227842866 . T . PASS END=227842866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 227842867 . G . PASS END=227842867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 227842868 . C . PASS END=227842877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 227842878 . T . PASS END=227842878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 227842879 . C . PASS END=227842880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr1 227842881 . T . PASS END=227842881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 227842882 . C . PASS END=227842885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,946:0,81,255:27,0 chr1 227842886 . A . PASS END=227842889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 227842890 . A . PASS END=227842891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227842892 . T . PASS END=227842893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:26,0 chr1 227842894 . C . PASS END=227842896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 227842897 . A . PASS END=227842897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 227842898 . C . PASS END=227842900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr1 227842901 . G . PASS END=227842901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:28,0 chr1 227842902 . A . PASS END=227842904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 227842905 . A . PASS END=227842905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 227842906 . A . PASS END=227842906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 227842907 . A . PASS END=227842907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 227842908 . A . PASS END=227842908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 227842909 . C . PASS END=227842916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,70,255:26,0 chr1 227842917 . A . PASS END=227842917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,885:0,54,255:22,0 chr1 227842918 . T . PASS END=227842926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:24,0 chr1 227842927 . T . PASS END=227842927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,814:0,31,255:22,0 chr1 227842928 . G . PASS END=227842935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 227842936 . A . PASS END=227842936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,721:0,39,255:21,0 chr1 227842937 . C . PASS END=227842937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 227842938 . T . PASS END=227842943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:23,0 chr1 227842944 . T . PASS END=227842944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:22,0 chr1 227842945 . C . PASS END=227842945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 227842946 . G . PASS END=227842946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:20,0 chr1 227842947 . G . PASS END=227842949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 227842950 . T . PASS END=227842958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,768:0,52,255:19,0 chr1 227842959 . A . PASS END=227842959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,701:0,39,255:18,0 chr1 227842960 . A . PASS END=227842960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 227842961 . G . PASS END=227842961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:19,0 chr1 227842962 . T . PASS END=227842962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 227842963 . A . PASS END=227842963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 227842964 . G . PASS END=227842970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 227842971 . G . PASS END=227842971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 227842972 . A . PASS END=227842973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 227842974 . A . PASS END=227842976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,776:0,52,255:20,0 chr1 227842977 . T . PASS END=227842978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 227842979 . A . PASS END=227842979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr1 227842980 . T . PASS END=227842981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 227842982 . C . PASS END=227842983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 227842984 . G . PASS END=227842986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:20,0 chr1 227842987 . G . PASS END=227842987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:19,0 chr1 227842988 . A . PASS END=227842992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,49,255:19,0 chr1 227842993 . C . PASS END=227842993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:16,0 chr1 227842994 . C . PASS END=227843001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,42,255:18,0 chr1 227843002 . T . PASS END=227843002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:16,0 chr1 227843003 . G . PASS END=227843004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:17,0 chr1 227843005 . G . PASS END=227843005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:17,0 chr1 227843006 . A . PASS END=227843020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr1 227843021 . C . PASS END=227843027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 227843028 . T . PASS END=227843030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 227843031 . A . PASS END=227843047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 227843048 . A . PASS END=227843048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 227843049 . G . PASS END=227843061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,740:0,66,255:22,0 chr1 227843062 . C . PASS END=227843062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 227843063 . A . PASS END=227843066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 227843067 . T . PASS END=227843067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 227843068 . G . PASS END=227843069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 227843070 . A . PASS END=227843072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,844:0,69,255:23,0 chr1 227843073 . G . PASS END=227843073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 227843074 . A . PASS END=227843074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,755:0,69,255:23,0 chr1 227843075 . A . PASS END=227843075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 227843076 . A . PASS END=227843086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 227843087 . G . PASS END=227843087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr1 227843088 . C . PASS END=227843089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 227843090 . A . PASS END=227843090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 227843091 . A . PASS END=227843091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 227843092 . G . PASS END=227843093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227843094 . A . PASS END=227843094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,927:0,53,255:25,0 chr1 227843095 . T . PASS END=227843095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 227843096 . G . PASS END=227843097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:25,0 chr1 227843098 . G . PASS END=227843102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 227843103 . A . PASS END=227843103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,962:0,53,255:25,0 chr1 227843104 . G . PASS END=227843108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 227843109 . T . PASS END=227843109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 227843110 . A . PASS END=227843110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 227843111 . A . PASS END=227843112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,1000:0,57,255:28,0 chr1 227843113 . A . PASS END=227843113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 227843114 . A . PASS END=227843115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 227843116 . T . PASS END=227843116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 227843117 . T . PASS END=227843117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 227843118 . C . PASS END=227843118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 227843119 . T . PASS END=227843124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227843125 . C . PASS END=227843128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 227843129 . C . PASS END=227843129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227843130 . T . PASS END=227843131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 227843132 . A . PASS END=227843132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:24,0 chr1 227843133 . A . PASS END=227843137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:31,0 chr1 227843138 . G . PASS END=227843138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:30,0 chr1 227843139 . G . PASS END=227843167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1202:0,83,255:32,0 chr1 227843168 . A . PASS END=227843168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr1 227843169 . A . PASS END=227843170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 227843171 . G . PASS END=227843171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 227843172 . T . PASS END=227843173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227843174 . A . PASS END=227843174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 227843175 . A . PASS END=227843177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr1 227843178 . A . PASS END=227843201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,899:0,65,255:26,0 chr1 227843395 . A . PASS END=227843529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:38:0,111,1385:0,111,255:40,0 chr1 227864880 . G . PASS END=227864884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:113:0,120,1800:0,255,255:40,0 chr1 227920093 . C . PASS END=227920098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr1 227920099 . G . PASS END=227920117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,646:0,54,255:19,0 chr1 227920118 . G . PASS END=227920138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,748:0,66,255:22,0 chr1 227920139 . A . PASS END=227920139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 227920140 . G . PASS END=227920152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 227920153 . T . PASS END=227920153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 227920154 . G . PASS END=227920176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,908:0,69,255:26,0 chr1 227920177 . T . PASS END=227920177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 227920178 . C . PASS END=227920180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 227920181 . T . PASS END=227920201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr1 227920202 . A . PASS END=227920202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:22,0 chr1 227920203 . A . PASS END=227920216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,908:0,72,255:26,0 chr1 227920217 . T . PASS END=227920271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1311:0,95,255:37,0 chr1 227920272 . C . PASS END=227920272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 227920273 . C . PASS END=227920287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1266:0,89,255:35,0 chr1 227920288 . C . PASS END=227920288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 227920289 . C . PASS END=227920315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1235:0,88,255:34,0 chr1 227920316 . A . PASS END=227920316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:29,0 chr1 227920317 . T . PASS END=227920339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1064:0,82,255:29,0 chr1 227920340 . T . PASS END=227920340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr1 227920341 . C . PASS END=227920344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 227920345 . A . PASS END=227920345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 227920346 . A . PASS END=227920354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 227920355 . C . PASS END=227920377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,71,255:25,0 chr1 227920582 . C . PASS END=227920582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 227920583 . T . PASS END=227920583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 227920584 . G . PASS END=227920591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:18,0 chr1 227920592 . T . PASS END=227920592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 227920593 . G . PASS END=227920603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:19,0 chr1 227920604 . G . PASS END=227920606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 227920607 . A . PASS END=227920626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,721:0,57,255:19,0 chr1 227920627 . G . PASS END=227920630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 227920631 . T . PASS END=227920631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 227920632 . C . PASS END=227920654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:25,0 chr1 227920655 . T . PASS END=227920655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 227920656 . G . PASS END=227920663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 227920664 . A . PASS END=227920664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:23,0 chr1 227920665 . A . PASS END=227920670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 227920671 . A . PASS END=227920671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,875:0,31,255:22,0 chr1 227920672 . C . PASS END=227920690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,917:0,75,255:25,0 chr1 227920691 . C . PASS END=227920691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 227920692 . C . PASS END=227920703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,870:0,75,255:25,0 chr1 227920704 . T . PASS END=227920704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 227920705 . G . PASS END=227920728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 227921115 . C . PASS END=227921117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 227921118 . G . PASS END=227921130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:12,0 chr1 227921131 . T . PASS END=227921131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 227921132 . G . PASS END=227921133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 227921134 . T . PASS END=227921134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 227921135 . G . PASS END=227921139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 227921140 . C . PASS END=227921178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:14:0,40,512:0,40,255:19,0 chr1 227921179 . A . PASS END=227921179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 227921180 . T . PASS END=227921180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:19,0 chr1 227921181 . C . PASS END=227921197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,817:0,66,255:23,0 chr1 227921198 . C . PASS END=227921198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 227921199 . A . PASS END=227921199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr1 227921200 . A . PASS END=227921200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 227921201 . G . PASS END=227921218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:23,0 chr1 227921219 . G . PASS END=227921220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr1 227921221 . T . PASS END=227921232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr1 227921233 . A . PASS END=227921233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 227921234 . G . PASS END=227921246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 227921247 . C . PASS END=227921271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 227921272 . C . PASS END=227921273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 227921274 . G . PASS END=227921274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 227921275 . T . PASS END=227921277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 227921278 . C . PASS END=227921284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 227921285 . C . PASS END=227921285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 227921286 . C . PASS END=227921286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 227921287 . T . PASS END=227921289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 227921290 . T . PASS END=227921290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 227921291 . C . PASS END=227921298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 227921299 . G . PASS END=227921302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 227921303 . G . PASS END=227921303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr1 227921304 . G . PASS END=227921308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr1 227921309 . G . PASS END=227921309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 227921310 . G . PASS END=227921317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 227921318 . T . PASS END=227921319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 227921320 . T . PASS END=227921320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 227921321 . T . PASS END=227921326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 227921327 . C . PASS END=227921327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 227921328 . A . PASS END=227921328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 227921329 . C . PASS END=227921335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,444:0,42,255:14,0 chr1 227921336 . T . PASS END=227921336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 227921337 . G . PASS END=227921343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 227921344 . C . PASS END=227921344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 227921345 . A . PASS END=227921346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 227921347 . C . PASS END=227921347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 227921348 . T . PASS END=227921360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:10,0 chr1 227921361 . G . PASS END=227921370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:10:0,20,315:0,20,255:9,0 chr1 227921371 . T . PASS END=227921372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 227921373 . G . PASS END=227921382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 227921608 . C . PASS END=227921609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr1 227921610 . G . PASS END=227921610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227921611 . C . PASS END=227921611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 227921612 . T . PASS END=227921612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:26,0 chr1 227921613 . G . PASS END=227921613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 227921614 . C . PASS END=227921614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 227921615 . C . PASS END=227921615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 227921616 . C . PASS END=227921616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr1 227921617 . G . PASS END=227921618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 227921619 . A . PASS END=227921619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 227921620 . G . PASS END=227921621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1056:0,87,255:31,0 chr1 227921622 . C . PASS END=227921622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 227921623 . C . PASS END=227921733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:30:0,87,1272:0,90,255:40,0 chr1 227922352 . C . PASS END=227922357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:34:0,98,1213:0,98,255:37,0 chr1 227922358 . A . PASS END=227922358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,0 chr1 227922359 . A . PASS END=227922517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:37:0,108,1321:0,111,255:40,0 chr1 227922713 . C . PASS END=227922713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 227922714 . G . PASS END=227922715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 227922716 . A . PASS END=227922716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,458:0,18,255:14,0 chr1 227922717 . G . PASS END=227922720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:16,0 chr1 227922721 . C . PASS END=227922721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:14,0 chr1 227922722 . G . PASS END=227922732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,521:0,48,255:18,0 chr1 227922733 . T . PASS END=227922733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 227922734 . C . PASS END=227922740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 227922741 . G . PASS END=227922741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 227922742 . G . PASS END=227922745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr1 227922746 . T . PASS END=227922746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 227922747 . C . PASS END=227922747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,607:0,54,255:18,0 chr1 227922748 . C . PASS END=227922748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 227922749 . C . PASS END=227922770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,621:0,40,255:19,0 chr1 227922771 . C . PASS END=227922771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 227922772 . C . PASS END=227922772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 227922773 . G . PASS END=227922786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 227922787 . T . PASS END=227922787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 227922788 . G . PASS END=227922788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:14,0 chr1 227922789 . C . PASS END=227922790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 227922791 . T . PASS END=227922791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr1 227922792 . G . PASS END=227922797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 227922798 . G . PASS END=227922800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,468:0,31,255:12,0 chr1 227922801 . G . PASS END=227922801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:11,0 chr1 227922802 . G . PASS END=227922811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 227922812 . A . PASS END=227922812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 227922813 . G . PASS END=227922821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 227922822 . G . PASS END=227922822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 227922823 . G . PASS END=227922826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr1 227922827 . G . PASS END=227922831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 227922832 . A . PASS END=227922832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 227922833 . A . PASS END=227922851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 227922852 . G . PASS END=227922852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr1 227922853 . T . PASS END=227922860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,443:0,39,255:13,0 chr1 227922861 . G . PASS END=227922861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 227922862 . G . PASS END=227922866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 227922867 . C . PASS END=227922876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 227922877 . A . PASS END=227922877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr1 227922878 . C . PASS END=227922887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 227922888 . C . PASS END=227922888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 227922889 . C . PASS END=227922891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 227922892 . C . LowGQ END=227922892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 227922893 . C . PASS END=227922906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:11,0 chr1 227922907 . A . PASS END=227922907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,341:0,2,255:10,0 chr1 227922908 . C . PASS END=227922915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 227922916 . A . PASS END=227922916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 227922917 . C . PASS END=227922918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 227922919 . T . PASS END=227922919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 227922920 . C . PASS END=227922920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 227922921 . G . PASS END=227922921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 227922922 . A . PASS END=227922926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 227922927 . C . PASS END=227922939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 227922940 . T . PASS END=227922940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 227922941 . G . PASS END=227922972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 227922973 . A . PASS END=227922977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 227922978 . G . PASS END=227922985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 227922986 . C . PASS END=227922987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 227922988 . G . PASS END=227922988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 227922989 . G . PASS END=227922989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 227922990 . T . PASS END=227922993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 227922994 . A . PASS END=227922995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:16:0,35,585:0,35,255:14,0 chr1 227922996 . G . PASS END=227923006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 227923007 . T . PASS END=227923007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 227923008 . C . PASS END=227923034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,592:0,41,255:19,0 chr1 227923035 . G . PASS END=227923039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227923040 . G . PASS END=227923040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 227923041 . C . PASS END=227923043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 227923044 . C . PASS END=227923047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 227923048 . A . PASS END=227923051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 227923052 . G . PASS END=227923065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 227923066 . C . PASS END=227923066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 227923067 . C . PASS END=227923069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:23,0 chr1 227923070 . G . PASS END=227923070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr1 227923071 . T . PASS END=227923080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,846:0,72,255:24,0 chr1 227923081 . G A, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,11,0:0,14,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,17:0,0,12,13 chr1 227923082 . C . PASS END=227923114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:26,0 chr1 227923115 . G . PASS END=227923115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:20,0 chr1 227923116 . C . PASS END=227923118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 227923119 . G . PASS END=227923120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 227923121 . C . PASS END=227923121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 227923122 . T . PASS END=227923123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 227923124 . G . PASS END=227923124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:22,0 chr1 227923125 . C . PASS END=227923130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,929:0,62,255:24,0 chr1 227923131 . T . PASS END=227923132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,793:0,56,255:20,0 chr1 227923133 . T . PASS END=227923133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 227923134 . T . PASS END=227923134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr1 227923135 . C . PASS END=227923148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr1 227923149 . C . PASS END=227923149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 227923150 . G . PASS END=227923150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 227923151 . A . PASS END=227923188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,599:0,40,255:19,0 chr1 227923189 . G . PASS END=227923189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 227923190 . G . PASS END=227923192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 227923193 . T . PASS END=227923200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 227924186 . A . PASS END=227924188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 227935393 . A . PASS END=227935533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1042:0,81,255:40,0 chr1 227935534 . T . PASS END=227935534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:29,0 chr1 227935535 . C . PASS END=227935537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227935538 . T . PASS END=227935538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 227935539 . C . PASS END=227935539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 227935540 . A . PASS END=227935540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 227935541 . G . PASS END=227935546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 227935547 . T . PASS END=227935547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 227935548 . G . PASS END=227935576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1164:0,83,255:30,0 chr1 227935577 . G . PASS END=227935577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:28,0 chr1 227935578 . C . PASS END=227935579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 227935580 . T . PASS END=227935580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:25,0 chr1 227935581 . C . PASS END=227935581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 227935582 . C . PASS END=227935583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 227935584 . C . PASS END=227935584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 227935585 . C . PASS END=227935586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 227935587 . C . PASS END=227935589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:28,0 chr1 227935590 . C . PASS END=227935598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1068:0,74,255:26,0 chr1 227935599 . T . PASS END=227935599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:24,0 chr1 227935600 . G . PASS END=227935613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr1 227935614 . G . PASS END=227935616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 227935617 . T . PASS END=227935617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:24,0 chr1 227935618 . T . PASS END=227935631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 227935632 . C . PASS END=227935636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 227935637 . C . PASS END=227935637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 227935638 . C . PASS END=227935642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 227935643 . C . PASS END=227935668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,992:0,65,255:26,0 chr1 227935669 . C . PASS END=227935671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227935672 . T . PASS END=227935673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 227935674 . G . PASS END=227935676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227935677 . C . PASS END=227935677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr1 227935678 . A . PASS END=227935680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 227935681 . T . PASS END=227935681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 227935682 . C . PASS END=227935691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr1 227935692 . A . PASS END=227935716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr1 227935717 . A . PASS END=227935717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 227935718 . T . PASS END=227935764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,839:0,65,255:26,0 chr1 227935765 . G . PASS END=227935768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 227935769 . A . PASS END=227935803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 227935804 . A . PASS END=227935804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr1 227935805 . C . PASS END=227935829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr1 227935830 . A . PASS END=227935859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,978:0,81,255:34,0 chr1 227935860 . C . PASS END=227935861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1335:0,72,255:31,0 chr1 227935862 . A . PASS END=227935871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,83,255:32,0 chr1 227935872 . G . PASS END=227935872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 227935873 . C . PASS END=227935874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,82,255:27,0 chr1 227935875 . G . PASS END=227935875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 227935876 . C . PASS END=227935877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 227935878 . G . PASS END=227935882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr1 227935883 . G . PASS END=227935892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 227935893 . A . PASS END=227935893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 227935894 . G . PASS END=227935896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr1 227935897 . C . PASS END=227935924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,71,255:26,0 chr1 227935925 . T . PASS END=227935925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 227935926 . G . PASS END=227935934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 227946696 . A . PASS END=227946698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 227946699 . G . PASS END=227946706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr1 227946707 . A . PASS END=227946707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr1 227946708 . A . PASS END=227946708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 227946709 . C . PASS END=227946709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 227946710 . T . PASS END=227946735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:30:0,86,1096:0,86,255:40,0 chr1 227946736 . A . PASS END=227946772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,99,1563:0,99,255:40,0 chr1 227946773 . C T, 43.45 PASS DP=44;MQ=250.00;MQRankSum=5.453;ReadPosRankSum=3.135;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,16,0:0.364,0.000:44:15,6,0:13,10,0:43:78,0,50,556,993,1550:255,0,255:28,0:4.3452e+01,2.1797e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,6,10:12,16,10,6 chr1 227946774 . C . PASS END=227946810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:41:0,102,1530:0,116,255:40,0 chr1 227946811 . G . PASS END=227946884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1202:0,83,255:40,0 chr1 227946885 . G . PASS END=227946885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 227946886 . C . PASS END=227946886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 227946887 . T . PASS END=227946889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:28,0 chr1 227946890 . C . PASS END=227946890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 227946891 . C . PASS END=227946891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 227946892 . G . PASS END=227946898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1235:0,88,255:31,0 chr1 227946899 . T . PASS END=227946901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1213:0,66,255:31,0 chr1 227946902 . C . PASS END=227946953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1091:0,80,255:33,0 chr1 227946954 . A . PASS END=227946954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,962:0,60,255:28,0 chr1 227946955 . G . PASS END=227946955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 227946956 . A . PASS END=227946956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,952:0,62,255:29,0 chr1 227946957 . A . PASS END=227946958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 227946959 . A . PASS END=227946959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,992:0,76,255:27,0 chr1 227946960 . C . PASS END=227946966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 227946967 . G . PASS END=227946967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 227946968 . A . PASS END=227946996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:34:0,84,1258:0,89,255:35,0 chr1 227946997 . A . PASS END=227946997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr1 227946998 . G . PASS END=227947130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1155:0,80,255:40,0 chr1 227947131 . C . PASS END=227947161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,820:0,64,255:26,0 chr1 227947162 . A . PASS END=227947191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:17:0,41,681:0,41,255:19,0 chr1 227954660 . C . PASS END=227954671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,676:0,54,255:19,0 chr1 227954672 . T . PASS END=227954675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:26,0 chr1 227954676 . C . PASS END=227954737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1172:0,84,255:34,0 chr1 227954738 . C . PASS END=227954738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 227954739 . A . PASS END=227954745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 227954746 . C . PASS END=227954746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 227954747 . C . PASS END=227954757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 227954758 . G . PASS END=227954784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:25,0 chr1 227958272 . G . PASS END=227958322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:32:0,93,1217:0,94,255:40,0 chr1 227958323 . C . PASS END=227958323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:7:45:0,7,1198:0,7,255:36,0 chr1 227958324 . T . PASS END=227958346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,114,1710:0,123,255:40,0 chr1 227963490 . G . PASS END=227963490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 227963491 . G . PASS END=227963491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1065:0,62,255:29,0 chr1 227963492 . C . PASS END=227963500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr1 227963501 . T . PASS END=227963501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:31,0 chr1 227963502 . A . PASS END=227963505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:33,0 chr1 227963506 . C . PASS END=227963508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:30,1 chr1 227963509 . T . PASS END=227963561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:29:0,83,1172:0,83,255:33,0 chr1 227963562 . T . PASS END=227963562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 227963563 . G . PASS END=227963572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 227963573 . A . PASS END=227963582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr1 227968228 . A . PASS END=227968229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 227968230 . C . PASS END=227968230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:28,0 chr1 227968231 . C . PASS END=227968231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 227968232 . T . PASS END=227968232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 227968233 . G . PASS END=227968234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 227968235 . G . PASS END=227968235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:31,0 chr1 227968236 . G . PASS END=227968243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1202:0,83,255:34,0 chr1 227968244 . A . PASS END=227968244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:33,0 chr1 227968245 . G . PASS END=227968374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:34:0,99,1302:0,101,255:40,0 chr1 227974502 . A . PASS END=227974583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1155:0,80,255:38,0 chr1 227974584 . C . PASS END=227974584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 227974585 . T . PASS END=227974586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 227974587 . A . PASS END=227974616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,74,255:26,0 chr1 227974741 . G . PASS END=227974835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1025:0,80,255:34,0 chr1 227974836 . A . PASS END=227974852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr1 227975251 . C . PASS END=227975261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,529:0,41,255:19,0 chr1 227975262 . A . PASS END=227975314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,745:0,60,255:26,0 chr1 227975315 . A . PASS END=227975315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr1 227975316 . G . PASS END=227975339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,884:0,69,255:23,0 chr1 227975340 . C . PASS END=227975364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 227975365 . T . PASS END=227975365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 227975366 . C . PASS END=227975376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,660:0,54,255:18,0 chr1 227975377 . A . PASS END=227975379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 227975380 . G . PASS END=227975380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 227975381 . T . PASS END=227975381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 227975382 . C . PASS END=227975386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 227975387 . A . PASS END=227975398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,476:0,42,255:14,0 chr1 227975399 . T . PASS END=227975399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 227975400 . T . PASS END=227975402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 227975403 . C . PASS END=227975411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 227975412 . C . PASS END=227975413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 227975414 . C A, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.451;ReadPosRankSum=-0.085;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,10,0:0.769,0.000:13:2,6,0:1,4,0:43:85,0,41,356,107,464:255,0,52:3,0:5.0000e+01,2.0243e-04,4.4366e+01,3.5647e+02,1.4205e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,1,4,6:1,2,4,6 chr1 227975415 . G . PASS END=227975415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 227975416 . C . PASS END=227975429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:23:10:0,23,360:0,23,255:9,0 chr1 227975430 . C . LowGQ END=227975430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:8,0 chr1 227975431 . G . PASS END=227975440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr1 227975441 . C . PASS END=227975448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:6,0 chr1 227975956 . A . PASS END=227975956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 227975957 . T . PASS END=227975972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,139:0,12,139:6,0 chr1 227976092 . A . PASS END=227976098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 227976099 . G . PASS END=227976099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 227976100 . G . PASS END=227976102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 227976103 . T . PASS END=227976103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 227976104 . G . PASS END=227976108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 227976109 . C . PASS END=227976109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 227976110 . A . PASS END=227976110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 227976111 . G . PASS END=227976121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 227976122 . C . PASS END=227976122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,405:0,3,255:13,0 chr1 227976123 . G . PASS END=227976129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 227976130 . G . PASS END=227976130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 227976131 . T . PASS END=227976133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 227976134 . T . PASS END=227976136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 227976137 . G . PASS END=227976145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 227976146 . T . PASS END=227976151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 227976152 . C . PASS END=227976158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,550:0,45,255:15,0 chr1 227976159 . C . PASS END=227976195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,499:0,45,255:18,0 chr1 227976196 . A C, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.510;ReadPosRankSum=2.799;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,10,0:0.556,0.000:18:4,8,0:4,2,0:48:85,0,50,350,286,636:255,0,255:8,0:5.0000e+01,6.7822e-05,5.2517e+01,3.4968e+02,3.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,3,7:7,1,3,7 chr1 227976197 . A . PASS END=227976233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:18,0 chr1 227976234 . G . PASS END=227976243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 227976244 . C . PASS END=227976254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:12,0 chr1 227976255 . A . LowGQ END=227976255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr1 227976256 . G . PASS END=227976258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 227976259 . G . PASS END=227976259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 227976260 . C . PASS END=227976263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 227976264 . C . PASS END=227976265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 227976266 . C . PASS END=227976282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 227976283 . A . PASS END=227976283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 227976284 . G . PASS END=227976304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 227976305 . C . PASS END=227976331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 227976332 . G . PASS END=227976340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr1 227976341 . G . PASS END=227976341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 227976342 . C . PASS END=227976359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 227976360 . G . PASS END=227976367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,512:0,31,255:13,0 chr1 227976368 . G . PASS END=227976380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 227976381 . A . PASS END=227976381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 227976382 . G . PASS END=227976409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,529:0,45,255:18,0 chr1 227976410 . A . PASS END=227976414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 227976415 . C . PASS END=227976430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 227976431 . G . PASS END=227976432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 227976433 . G . PASS END=227976445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 227976446 . G . PASS END=227976448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 227976449 . A . PASS END=227976449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 227976450 . C . PASS END=227976454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 227976455 . G . PASS END=227976455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 227976456 . C . PASS END=227976461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 227976462 . G . PASS END=227976463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 227976464 . C . PASS END=227976475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 227976476 . A . PASS END=227976484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr1 227976485 . T . PASS END=227976485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr1 227976486 . T . PASS END=227976504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,645:0,51,255:19,0 chr1 227976505 . A . PASS END=227976521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,856:0,63,255:25,0 chr1 227976522 . C . PASS END=227976522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 227976523 . G . PASS END=227976530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:25,0 chr1 227976531 . C . PASS END=227976531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:22,0 chr1 227976532 . G . PASS END=227976536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 227976537 . T . PASS END=227976537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 227976538 . C . PASS END=227976540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 227976541 . A . PASS END=227976542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:52:23:0,52,709:0,52,255:21,0 chr1 227976543 . G . PASS END=227976543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 227976544 . G . PASS END=227976544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 227976545 . T . PASS END=227976547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 227976548 . C . PASS END=227976548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr1 227976549 . T . PASS END=227976573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,762:0,66,255:22,0 chr1 227976574 . G . PASS END=227976574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 227976575 . G . PASS END=227976577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 227976578 . T . PASS END=227976578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 227976579 . G . PASS END=227976586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 227976587 . C . PASS END=227976587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 227976588 . C . PASS END=227976600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,546:0,40,255:19,0 chr1 227976806 . T . PASS END=227976808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr1 227976809 . G . PASS END=227976837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1141:0,93,255:32,0 chr1 227976838 . T . PASS END=227976838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr1 227976839 . C . PASS END=227976860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1172:0,96,255:32,0 chr1 227976861 . T . PASS END=227976861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 227976862 . G . PASS END=227976865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 227976866 . G . PASS END=227976866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 227976867 . T . PASS END=227976867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 227976868 . G . PASS END=227976868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 227976869 . G . PASS END=227976871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 227976872 . C . PASS END=227976872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 227976873 . T . PASS END=227976873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 227976874 . T . PASS END=227976876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 227976877 . G . PASS END=227976880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr1 227976881 . T . PASS END=227976881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:28,0 chr1 227976882 . G . PASS END=227976887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:29,0 chr1 227976888 . G . PASS END=227976901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:27:0,75,1125:0,77,255:26,0 chr1 227976902 . G . PASS END=227976947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1194:0,83,255:32,0 chr1 227976948 . G . PASS END=227976954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 227976955 . G . PASS END=227976984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:30,0 chr1 227976985 . G . PASS END=227976987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 227976988 . G . PASS END=227976990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 227976991 . C . PASS END=227977010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr1 227977011 . G . PASS END=227977012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 227977013 . C . PASS END=227977031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,925:0,64,255:26,0 chr1 227977032 . G . PASS END=227977032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 227977033 . C . PASS END=227977038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 227977039 . A . PASS END=227977039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 227977040 . A . PASS END=227977081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 227977082 . T . PASS END=227977092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 227977093 . G . PASS END=227977125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,841:0,72,255:26,0 chr1 227977126 . C . PASS END=227977130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 227977131 . A . PASS END=227977131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 227977132 . G . PASS END=227977133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 227977134 . C . PASS END=227977135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 227977136 . T . PASS END=227977142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1139:0,90,255:30,0 chr1 227977143 . G . PASS END=227977143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 227977144 . T . PASS END=227977182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1096:0,90,255:32,0 chr1 227977183 . C . PASS END=227977194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 227977195 . C . PASS END=227977201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:27,0 chr1 227977202 . C . PASS END=227977220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:21,0 chr1 227977221 . A . PASS END=227977230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,50,255:18,0 chr1 228003418 . A . PASS END=228003423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,596:0,48,255:19,0 chr1 228003424 . G . PASS END=228003426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228003427 . C . PASS END=228003427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 228003428 . C . PASS END=228003429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228003430 . G . PASS END=228003430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 228003431 . C . PASS END=228003431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228003432 . T . PASS END=228003435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228003436 . G . PASS END=228003438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228003439 . A . PASS END=228003439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:19,0 chr1 228003440 . T . PASS END=228003446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr1 228003447 . A . PASS END=228003447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 228003448 . C . PASS END=228003454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,939:0,78,255:26,0 chr1 228003455 . C . PASS END=228003456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228003457 . T . PASS END=228003459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 228003460 . G . PASS END=228003461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 228003462 . C . PASS END=228003466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228003467 . G . PASS END=228003467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228003468 . C . PASS END=228003468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 228003469 . C . PASS END=228003473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228003474 . G . PASS END=228003474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr1 228003475 . C . PASS END=228003482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 228003483 . C . PASS END=228003483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 228003484 . C . PASS END=228003491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228003492 . G . PASS END=228003494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228003495 . C . PASS END=228003509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228003510 . A . PASS END=228003534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,862:0,65,255:26,0 chr1 228003535 . A . PASS END=228003535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228003536 . A . PASS END=228003536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 228003537 . C . PASS END=228003539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228003540 . G . PASS END=228003543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 228003544 . A . PASS END=228003565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,651:0,41,255:19,0 chr1 228003791 . C . PASS END=228003814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,900:0,66,255:26,0 chr1 228003815 . G . PASS END=228003817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228003818 . A . PASS END=228003819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228003820 . A . PASS END=228003903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1081:0,86,255:34,0 chr1 228003904 . T . PASS END=228003904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 228003905 . C . PASS END=228003912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 228003913 . A . PASS END=228003924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,74,255:26,0 chr1 228003925 . G . PASS END=228003953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,53,255:18,0 chr1 228004910 . G . PASS END=228004918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228004919 . T . PASS END=228004932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:30,0 chr1 228004933 . A . PASS END=228004933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 228004934 . C . PASS END=228005141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1155:0,84,255:40,0 chr1 228005142 . A . PASS END=228005160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:26,0 chr1 228005161 . G . PASS END=228005165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228005166 . C . PASS END=228005166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228005167 . T . PASS END=228005180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,798:0,50,255:19,0 chr1 228005181 . G . PASS END=228005181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:12,0 chr1 228007350 . C . PASS END=228007410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:142,0:142:89:130:0,89,1800:0,89,255:40,0 chr1 228033171 . G . PASS END=228033174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr1 228033175 . G . PASS END=228033196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,993:0,84,255:30,0 chr1 228033197 . A G, 137.29 PASS DP=30;MQ=249.97;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,16,0:0,14,0:87:175,90,0,1163,90,1163:255,90,0:0,0:1.3729e+02,8.7292e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,13:0,0,15,15 chr1 228033198 . T . PASS END=228033234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:30:0,86,1247:0,86,255:40,0 chr1 228033235 . G . PASS END=228033286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1397:0,104,255:40,0 chr1 228033287 . A . PASS END=228033287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:37,0 chr1 228033288 . T . PASS END=228033313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,96,255:38,0 chr1 228033655 . G . PASS END=228033657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr1 228033658 . G . PASS END=228033660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 228033661 . T . PASS END=228033661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:19,0 chr1 228033662 . C . PASS END=228033662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 228033663 . C . PASS END=228033663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228033664 . G . PASS END=228033665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:21,0 chr1 228033666 . G . PASS END=228033666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228033667 . G . PASS END=228033667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr1 228033668 . G . PASS END=228033689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,884:0,61,255:26,0 chr1 228033690 . C . PASS END=228033699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1019:0,87,255:30,0 chr1 228033700 . T . PASS END=228033700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr1 228033701 . T . PASS END=228033706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 228033707 . T . PASS END=228033707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr1 228033708 . T . PASS END=228033713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:29,0 chr1 228033714 . T . PASS END=228033714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:27,0 chr1 228033715 . G . PASS END=228033738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1103:0,90,255:30,0 chr1 228033739 . A . PASS END=228033741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 228033742 . C . PASS END=228033743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr1 228033744 . T . PASS END=228033744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:27,0 chr1 228033745 . C . PASS END=228033786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr1 228033787 . T . PASS END=228033787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 228033788 . G . PASS END=228033791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 228033792 . A . PASS END=228033792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr1 228033793 . T . PASS END=228033798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 228033799 . A . PASS END=228033799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:26,0 chr1 228033800 . A . PASS END=228033807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr1 228033808 . A . PASS END=228033830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:26,0 chr1 228033831 . A . PASS END=228033858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 228033859 . C . PASS END=228033859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228033860 . C . PASS END=228033861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228033862 . A . PASS END=228033909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr1 228109219 . T . PASS END=228109230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 228109231 . G . PASS END=228109237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 228109238 . A . PASS END=228109240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228109241 . T . PASS END=228109263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,861:0,66,255:24,0 chr1 228109264 . G . PASS END=228109264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 228109265 . C . PASS END=228109283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:24,0 chr1 228109284 . A . PASS END=228109284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:22,0 chr1 228109285 . A . PASS END=228109286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:23,0 chr1 228109287 . G . PASS END=228109287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr1 228109288 . C . PASS END=228109290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 228109291 . C . PASS END=228109291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr1 228109292 . T . PASS END=228109297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 228109298 . T . PASS END=228109298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 228109299 . G . PASS END=228109299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 228109300 . G . PASS END=228109300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 228109301 . C . PASS END=228109304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228109305 . G . PASS END=228109305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 228109306 . C . PASS END=228109316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr1 228109317 . C . PASS END=228109317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 228109318 . C . PASS END=228109375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,854:0,61,255:26,0 chr1 228109376 . T . PASS END=228109376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 228109377 . G . PASS END=228109388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 228109389 . C . PASS END=228109389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 228109390 . A . PASS END=228109397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 228109398 . C . PASS END=228109421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,662:0,46,255:19,0 chr1 228109422 . A . PASS END=228109422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:14,0 chr1 228109423 . G . PASS END=228109437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:16,0 chr1 228109438 . A . PASS END=228109438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 228109439 . T . PASS END=228109449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228109450 . C . PASS END=228109451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 228109452 . G . PASS END=228109453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228109454 . T . PASS END=228109454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:13,0 chr1 228109455 . C . PASS END=228109457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 228109458 . G . PASS END=228109459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228109460 . G . PASS END=228109464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 228109465 . G . PASS END=228109490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr1 228109491 . C . PASS END=228109500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:11:0,23,360:0,23,255:9,0 chr1 228109501 . G . PASS END=228109505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr1 228109506 . G . PASS END=228109559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 228109560 . C . PASS END=228109590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:22,0 chr1 228109591 . A . PASS END=228109591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 228109592 . T . PASS END=228109604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,61,255:23,0 chr1 228109605 . C . PASS END=228109605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 228109606 . A . PASS END=228109606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228109607 . T . PASS END=228109608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 228109609 . G . PASS END=228109615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 228109616 . G . PASS END=228109616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 228109617 . C . PASS END=228109621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:24,0 chr1 228109622 . T . PASS END=228109622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:24,0 chr1 228109623 . G . PASS END=228109627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 228109628 . C . PASS END=228109629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 228109630 . G . PASS END=228109632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228109633 . G . PASS END=228109642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr1 228109643 . G . PASS END=228109643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr1 228109644 . T . PASS END=228109665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1072:0,87,255:31,0 chr1 228109666 . G . PASS END=228109666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr1 228109667 . C . PASS END=228109668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 228109669 . C . PASS END=228109669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 228109670 . T . PASS END=228109674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1084:0,87,255:29,0 chr1 228109675 . G . PASS END=228109675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 228109676 . G . PASS END=228109697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,995:0,81,255:29,0 chr1 228109698 . T . PASS END=228109701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228111839 . C . PASS END=228111839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:12,0 chr1 228111840 . T . LowGQ END=228111840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,8:17:0:17:0,0,112:126,0,238:8,0 chr1 228111841 . T . PASS END=228111841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:12,0 chr1 228111842 . C . LowGQ END=228111844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,6:17:0:17:0,0,261:52,0,255:12,0 chr1 228111845 . A . PASS END=228111845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,512:0,21,255:14,0 chr1 228111846 . C . PASS END=228111846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:14,0 chr1 228111847 . C . PASS END=228111847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,492:0,12,255:14,0 chr1 228111848 . C . PASS END=228111848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 228111849 . A . LowGQ END=228111849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,374:21,0,255:13,0 chr1 228111850 . C . PASS END=228111850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,566:0,10,255:14,0 chr1 228111851 . G . LowGQ END=228111851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,371:70,0,255:13,0 chr1 228111852 . A . PASS END=228111852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,468:0,10,255:15,0 chr1 228111853 . G . LowGQ END=228111853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,498:4,0,255:14,0 chr1 228111854 . G . PASS END=228111854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr1 228111855 . T . LowGQ END=228111855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,446:40,0,255:14,0 chr1 228111856 . T . PASS END=228111856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 228111857 . G . PASS END=228111858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,635:0,40,255:17,0 chr1 228111859 . T . PASS END=228111859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,602:0,24,255:16,0 chr1 228111860 . G . PASS END=228111860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,628:0,13,255:17,0 chr1 228111861 . T . PASS END=228111861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 228111862 . G . PASS END=228111862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr1 228111863 . G . PASS END=228111863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 228111864 . A . LowGQ END=228111864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,573:4,0,255:17,0 chr1 228111865 . A . PASS END=228111865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,637:0,16,255:18,0 chr1 228111866 . G . PASS END=228111866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,737:0,22,255:20,0 chr1 228111867 . T . PASS END=228111867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228111868 . C . PASS END=228111868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr1 228111869 . C . PASS END=228111870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr1 228111871 . C . PASS END=228111871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,745:0,22,255:21,0 chr1 228111872 . A . PASS END=228111872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr1 228111873 . C . PASS END=228111873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:20,0 chr1 228111874 . G . PASS END=228111874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,743:0,14,255:21,0 chr1 228111875 . G . PASS END=228111875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,775:0,6,255:23,0 chr1 228111876 . G . PASS END=228111876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:24,0 chr1 228111877 . C . PASS END=228111877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr1 228111878 . T . PASS END=228111878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:23,0 chr1 228111879 . C . PASS END=228111880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:25,0 chr1 228111881 . C . PASS END=228111881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:25,0 chr1 228111882 . A . PASS END=228111882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,851:0,17,255:24,0 chr1 228111883 . G . PASS END=228111884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:54:29:0,54,1014:0,54,255:27,0 chr1 228111885 . T . PASS END=228111885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228111886 . C . PASS END=228111886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,955:0,13,255:27,0 chr1 228111887 . C . PASS END=228111887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr1 228111888 . T . PASS END=228111889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:30,0 chr1 228111890 . G . PASS END=228111893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,871:0,60,255:29,0 chr1 228111894 . G . PASS END=228111894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr1 228111895 . A . PASS END=228111895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 228111896 . C . PASS END=228111896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 228111897 . C . PASS END=228111898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr1 228111899 . T . PASS END=228111899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 228111900 . C . PASS END=228111900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 228111901 . T . PASS END=228111901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 228111902 . G . PASS END=228111919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1180:0,83,255:34,0 chr1 228111920 . G . PASS END=228111920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:33,0 chr1 228111921 . A . PASS END=228111999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:37,0 chr1 228112000 . C . PASS END=228112005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,70,255:26,0 chr1 228112006 . T . PASS END=228112006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:22,0 chr1 228112007 . A . PASS END=228112037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr1 228112038 . T . PASS END=228112038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:19,0 chr1 228112039 . T . PASS END=228112039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228112040 . G . PASS END=228112041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228112042 . C . PASS END=228112042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228112043 . C . PASS END=228112048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 228112049 . G . PASS END=228112049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 228112050 . T . PASS END=228112053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 228112054 . T . PASS END=228112054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 228112055 . C . PASS END=228112083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:19,0 chr1 228112084 . A . PASS END=228112101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:19,0 chr1 228112964 . C . PASS END=228113001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,551:0,41,255:19,0 chr1 228113002 . G . PASS END=228113011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,754:0,60,255:22,0 chr1 228113012 . A . PASS END=228113012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 228113013 . G . PASS END=228113034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:24,0 chr1 228113035 . T . PASS END=228113035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 228113036 . G . PASS END=228113102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,962:0,72,255:26,0 chr1 228113103 . C . PASS END=228113103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 228113104 . A . PASS END=228113118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 228113119 . C . PASS END=228113125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 228113126 . G . PASS END=228113135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:18,0 chr1 228113136 . G . PASS END=228113136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 228113137 . T . PASS END=228113139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 228113140 . C . PASS END=228113161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:11:0,33,382:0,33,255:13,0 chr1 228113162 . C . PASS END=228113162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 228113163 . A G, 80.11 PASS DP=11;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,7,0:0,4,0:30:118,33,0,418,33,418:255,36,0:0,0:8.0108e+01,3.0108e+01,4.2396e-03,4.1543e+02,6.4878e+01,4.1843e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,7:0,0,4,7 chr1 228113164 . G . PASS END=228113168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 228113169 . C . LowGQ END=228113169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr1 228113170 . T . PASS END=228113170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 228113171 . C . PASS END=228113175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 228113176 . T . PASS END=228113176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 228113177 . C . PASS END=228113178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 228113179 . A . PASS END=228113179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 228113180 . G . PASS END=228113183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,427:0,36,255:12,0 chr1 228113184 . C . PASS END=228113193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,315:0,20,255:8,0 chr1 228113194 . A . PASS END=228113200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 228113201 . G . PASS END=228113213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 228113214 . C . PASS END=228113220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 228135494 . C . PASS END=228135498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 228135499 . G . PASS END=228135503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 228135504 . C . LowGQ END=228135504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr1 228135505 . G . PASS END=228135583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 228135584 . A . PASS END=228135588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 228194830 . A . PASS END=228194840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 228194841 . C . PASS END=228194841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 228194842 . G . PASS END=228194848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:19,0 chr1 228194849 . T . PASS END=228194854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 228194855 . T . PASS END=228194863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr1 228194864 . G . PASS END=228194871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 228194872 . C . PASS END=228194872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 228194873 . A . PASS END=228194894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr1 228194895 . C . PASS END=228194900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 228210368 . G . PASS END=228210403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr1 228210404 . C . PASS END=228210404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 228210405 . T . PASS END=228210406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 228210407 . G . PASS END=228210407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 228210408 . C . PASS END=228210408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 228210409 . A . PASS END=228210411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 228210412 . C . LowGQ END=228210412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 228210413 . C . PASS END=228210425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 228210426 . A . PASS END=228210427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228210428 . C . PASS END=228210431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228210432 . C . PASS END=228210432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 228210433 . C . PASS END=228210441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 228210442 . T . PASS END=228210442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 228210443 . C . PASS END=228210456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr1 228210457 . G . PASS END=228210457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 228210458 . C . PASS END=228210466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 228210467 . G . PASS END=228210467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 228210468 . A . PASS END=228210482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,623:0,51,255:18,0 chr1 228210483 . A . PASS END=228210483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr1 228210484 . T . PASS END=228210492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 228210493 . T . PASS END=228210507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr1 228210508 . A . PASS END=228210508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 228210509 . G . PASS END=228210512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:12,0 chr1 228210513 . G . PASS END=228210513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 228210514 . G . PASS END=228210519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 228210520 . A . PASS END=228210520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 228210521 . G . PASS END=228210524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 228210525 . T . PASS END=228210525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228210526 . G . PASS END=228210533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228210534 . C . PASS END=228210546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 228210547 . G . PASS END=228210548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 228210549 . C . PASS END=228210554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:7,0 chr1 228210555 . A . PASS END=228210596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,149:6,0 chr1 228210597 . G . LowGQ END=228210597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 228210598 . T . PASS END=228210599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 228210600 . C . LowGQ END=228210600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr1 228210601 . T . PASS END=228210607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 228210608 . A . PASS END=228210608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,149:3,0 chr1 228210609 . G . PASS END=228210609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 228238357 . C . PASS END=228238459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,529:0,41,255:19,0 chr1 228238460 . C . PASS END=228238461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228238462 . G . PASS END=228238462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 228238463 . C . PASS END=228238463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 228238464 . C . PASS END=228238471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,698:0,44,255:19,0 chr1 228238472 . G . PASS END=228238478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 228238479 . C . PASS END=228238480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228238481 . A . PASS END=228238481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr1 228238482 . G . PASS END=228238483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228238484 . C . PASS END=228238486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 228238487 . G . PASS END=228238487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 228238488 . G . PASS END=228238522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 228238523 . G . PASS END=228238528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 228238529 . T . PASS END=228238531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 228238532 . G . PASS END=228238533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 228238534 . T . PASS END=228238534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 228238535 . G . PASS END=228238536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228238537 . T . PASS END=228238537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:27,0 chr1 228238538 . G . PASS END=228238538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 228238539 . T . PASS END=228238539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr1 228238540 . C . PASS END=228238541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 228238542 . C . PASS END=228238542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 228238543 . G . PASS END=228238548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 228238549 . T . PASS END=228238549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 228238550 . C . PASS END=228238556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228238557 . G . PASS END=228238566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,887:0,70,255:27,0 chr1 228238567 . A . PASS END=228238569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228238570 . G . PASS END=228238570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 228238571 . G . PASS END=228238572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228238573 . C . PASS END=228238573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 228238574 . A . PASS END=228238583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr1 228238584 . T . PASS END=228238611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 228238612 . C . PASS END=228238622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:18,0 chr1 228246687 . G . PASS END=228246688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 228246689 . C . PASS END=228246689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 228246690 . A . PASS END=228246712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr1 228246713 . G . PASS END=228246716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr1 228246717 . A . PASS END=228246717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 228246718 . A . PASS END=228246739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 228246740 . C . PASS END=228246776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 228246777 . T . PASS END=228246777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 228246778 . T . PASS END=228246785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:17,0 chr1 228246786 . A . PASS END=228246786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 228246787 . T . PASS END=228246851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr1 228246852 . T . PASS END=228246882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,449:0,36,255:13,0 chr1 228246883 . G . PASS END=228246891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 228246892 . A . PASS END=228246914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 228246915 . G . PASS END=228246917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228246918 . C . PASS END=228246918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 228246919 . T . PASS END=228246919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 228246920 . G . PASS END=228246933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 228246934 . C . PASS END=228246950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228246951 . G . PASS END=228246952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228246953 . G . PASS END=228246953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228246954 . C . PASS END=228246954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 228246955 . C . PASS END=228246985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:15:0,42,630:0,43,255:19,0 chr1 228246986 . C . PASS END=228246994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr1 228246995 . C . PASS END=228246995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 228246996 . T . PASS END=228247010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 228247011 . C . PASS END=228247011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 228247012 . A . PASS END=228247027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr1 228247028 . C . PASS END=228247031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 228247032 . C . PASS END=228247037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 228247038 . T . PASS END=228247038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 228247039 . G . PASS END=228247039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228247040 . C . PASS END=228247041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 228247042 . G . PASS END=228247045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228247046 . C . PASS END=228247046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 228247047 . C . PASS END=228247059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 228247060 . C . PASS END=228247092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,673:0,41,255:19,0 chr1 228247093 . G . PASS END=228247098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,35,255:13,0 chr1 228247099 . T . PASS END=228247109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:11:0,24,360:0,33,255:9,0 chr1 228247110 . T . PASS END=228247116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:8:0,18,270:0,24,255:6,0 chr1 228247117 . T . PASS END=228247117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 228247118 . C . PASS END=228247120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 228247121 . C . PASS END=228247126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 228247127 . G . PASS END=228247134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 228247135 . C . PASS END=228247136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 228247137 . C . PASS END=228247158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,133:0,12,133:5,0 chr1 228247159 . G . PASS END=228247166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 228253676 . G . PASS END=228253724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,92,255:39,0 chr1 228253725 . A . PASS END=228253727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:37:0,78,1170:0,111,255:26,0 chr1 228253728 . C . PASS END=228253735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:28:0,81,1215:0,84,255:27,0 chr1 228253736 . C . PASS END=228253740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228253741 . C . PASS END=228253741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:25,0 chr1 228253742 . C . PASS END=228253744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 228254037 . G . PASS END=228254038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr1 228254039 . A . PASS END=228254039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 228254040 . T . PASS END=228254043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr1 228254044 . T . PASS END=228254044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 228254045 . G . PASS END=228254045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 228254046 . C . PASS END=228254071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:31:0,93,1105:0,93,255:40,0 chr1 228254072 . G . PASS END=228254108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1513:0,113,255:40,0 chr1 228254109 . G A, 49.97 PASS DP=47;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=3.803;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:11,9,0:12,13,0:48:85,0,50,779,794,1573:255,0,255:21,0:4.9974e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,13,9:11,12,16,6 chr1 228254110 . G . PASS END=228254146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,102,1598:0,102,255:40,0 chr1 228254147 . G . PASS END=228254231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1210:0,96,255:40,0 chr1 228254232 . T . PASS END=228254244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,81,255:26,0 chr1 228254245 . A . PASS END=228254248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 228254249 . C . PASS END=228254251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 228254252 . A . PASS END=228254253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:19,0 chr1 228263432 . T . PASS END=228263866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1158:0,80,255:40,0 chr1 228263867 . C . PASS END=228263867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr1 228263868 . C . PASS END=228264039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1260:0,81,255:40,0 chr1 228264040 . A . PASS END=228264046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 228264047 . A . PASS END=228264047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228264048 . G . PASS END=228264052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,67,255:26,0 chr1 228264053 . C . PASS END=228264055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 228284816 . A . PASS END=228284953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:90:36:0,90,1197:0,90,255:40,0 chr1 228284954 . C . PASS END=228284963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1305:0,90,255:35,0 chr1 228285043 . G . PASS END=228285132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:37:0,83,1297:0,83,255:40,0 chr1 228285133 . A . PASS END=228285133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:33,0 chr1 228285134 . C . PASS END=228285147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1182:0,88,255:34,0 chr1 228285148 . C . PASS END=228285148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:28,0 chr1 228285149 . A . PASS END=228285149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 228285150 . C . PASS END=228285153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:33:0,63,1170:0,63,255:26,0 chr1 228285292 . G . PASS END=228285293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228285294 . C . PASS END=228285295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228285296 . G . PASS END=228285314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:23,0 chr1 228285315 . A . PASS END=228285315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 228285316 . A . PASS END=228285316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228285317 . T . PASS END=228285317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 228285318 . G . PASS END=228285330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 228285331 . T . PASS END=228285334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 228285335 . C . PASS END=228285376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 228285377 . G . PASS END=228285377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 228285378 . C . PASS END=228285424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:24,0 chr1 228285425 . C . PASS END=228285425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 228285426 . C . PASS END=228285440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 228285441 . A . PASS END=228285441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 228285442 . A . PASS END=228285443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 228285444 . G . PASS END=228285444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 228285445 . T . PASS END=228285448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228285449 . G . PASS END=228285449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 228285450 . A . PASS END=228285468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,886:0,61,255:23,0 chr1 228285469 . T . PASS END=228285489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr1 228285490 . G . PASS END=228285521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,845:0,63,255:26,0 chr1 228285522 . A . PASS END=228285522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 228285523 . G . PASS END=228285525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:26,0 chr1 228285526 . C . PASS END=228285538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr1 228285539 . C . PASS END=228285539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 228285540 . T . PASS END=228285540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr1 228285541 . T . PASS END=228285541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 228285542 . C . PASS END=228285632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1074:0,83,255:35,0 chr1 228285633 . T . PASS END=228285633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:28,0 chr1 228285634 . C . PASS END=228285663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1011:0,84,255:30,0 chr1 228285664 . C . PASS END=228285686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr1 228285687 . G . PASS END=228285689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228285690 . C . PASS END=228285699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr1 228285700 . C . PASS END=228285702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228285703 . A . PASS END=228285704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228285705 . C . PASS END=228285714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr1 228288832 . T . PASS END=228288955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:33:0,96,1257:0,99,255:40,0 chr1 228289040 . C . PASS END=228289174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:53:0,120,1800:0,135,255:40,0 chr1 228289781 . C . PASS END=228289790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:26:0,67,909:0,67,255:27,0 chr1 228289791 . T . PASS END=228289791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 228289792 . C . PASS END=228289795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr1 228289796 . T . PASS END=228289822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 228289823 . G . PASS END=228289824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 228289825 . G . PASS END=228289836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 228289837 . C . PASS END=228289837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 228289838 . C . PASS END=228289845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1133:0,87,255:30,0 chr1 228289846 . G . PASS END=228289847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,985:0,73,255:28,0 chr1 228289848 . C . PASS END=228289850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 228289851 . T . PASS END=228289851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:28,0 chr1 228289852 . C . PASS END=228289852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228289853 . T . PASS END=228289853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 228289854 . C . PASS END=228289855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228289856 . A . PASS END=228289857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228289858 . G . PASS END=228289858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1023:0,51,255:25,0 chr1 228289859 . C . PASS END=228289866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1031:0,71,255:26,0 chr1 228290011 . C . PASS END=228290013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228290014 . G . PASS END=228290033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,615:0,43,255:19,0 chr1 228290034 . T . PASS END=228290034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:17,0 chr1 228290035 . G . PASS END=228290040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 228290041 . C . PASS END=228290045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228290046 . T . PASS END=228290046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr1 228290047 . G . PASS END=228290049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 228290050 . C . PASS END=228290050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 228290051 . T . PASS END=228290051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,637:0,8,255:19,0 chr1 228290052 . C . PASS END=228290052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 228290053 . T . PASS END=228290053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228290054 . C . PASS END=228290054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 228290055 . G . PASS END=228290055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228290056 . G . PASS END=228290056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 228290057 . G . PASS END=228290057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228290058 . A . PASS END=228290073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr1 228290074 . C . PASS END=228290079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 228290080 . G . PASS END=228290080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 228290081 . C . PASS END=228290081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228290082 . C . PASS END=228290082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 228290083 . A . PASS END=228290083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 228290179 . C . PASS END=228290185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:28,0 chr1 228290186 . T . PASS END=228290186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr1 228290187 . C . PASS END=228290200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr1 228290201 . G . PASS END=228290201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 228290202 . C . PASS END=228290210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1064:0,90,255:31,0 chr1 228290211 . G . PASS END=228290220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr1 228290221 . T . PASS END=228290221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:24,0 chr1 228290222 . C . PASS END=228290234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,961:0,75,255:25,0 chr1 228290235 . T . PASS END=228290235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 228290236 . T . PASS END=228290250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,892:0,61,255:26,0 chr1 228290251 . T . PASS END=228290251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 228290252 . C . PASS END=228290256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 228290257 . A . PASS END=228290257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228290258 . A . PASS END=228290261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr1 228290344 . C . PASS END=228290344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228290345 . T . PASS END=228290376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,746:0,66,255:23,0 chr1 228290377 . G . PASS END=228290377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 228290378 . T . PASS END=228290383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228290384 . T . PASS END=228290389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,674:0,44,255:19,0 chr1 228290600 . A . PASS END=228290604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:19,0 chr1 228290605 . G . PASS END=228290633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:26,0 chr1 228290634 . G . PASS END=228290634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 228290635 . C . PASS END=228290658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,908:0,72,255:26,0 chr1 228290659 . G . PASS END=228290670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1111:0,84,255:30,0 chr1 228290671 . G . PASS END=228290671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 228290672 . C . PASS END=228290716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1012:0,90,255:34,0 chr1 228290717 . T . PASS END=228290717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr1 228290718 . G . PASS END=228290734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:31:0,86,1225:0,86,255:32,0 chr1 228290735 . G . PASS END=228290740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228290741 . A . PASS END=228290750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:30,0 chr1 228290835 . C . PASS END=228290842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1201:0,86,255:32,0 chr1 228290843 . T . PASS END=228290844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:61:33:0,61,1040:0,61,255:30,0 chr1 228290845 . C . PASS END=228290878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,86,255:32,0 chr1 228290879 . T . PASS END=228290902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr1 228290903 . A . PASS END=228290903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 228290904 . C . PASS END=228290909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 228290910 . C . PASS END=228290910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 228290911 . A . PASS END=228290913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 228290914 . A . PASS END=228290914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 228290915 . C . PASS END=228290915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228290916 . T . PASS END=228290928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,631:0,44,255:18,0 chr1 228294461 . T . PASS END=228294473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,861:0,62,255:26,0 chr1 228294474 . C . PASS END=228294474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 228294475 . T . PASS END=228294475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:26,0 chr1 228294476 . G . PASS END=228294484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:31,0 chr1 228294485 . C . PASS END=228294485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 228294486 . T . PASS END=228294573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1294:0,89,255:37,0 chr1 228294574 . T . PASS END=228294576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:66:35:0,66,1178:0,66,255:31,0 chr1 228294577 . C . PASS END=228294583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr1 228294584 . C . PASS END=228294605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,68,255:26,0 chr1 228294606 . A . PASS END=228294618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,56,255:18,0 chr1 228294619 . T . PASS END=228294619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 228295368 . C . PASS END=228295373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 228295374 . G . PASS END=228295374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 228295375 . C . PASS END=228295380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 228295381 . C . PASS END=228295411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,551:0,41,255:19,0 chr1 228295412 . G . PASS END=228295451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:24,0 chr1 228295452 . C . PASS END=228295452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,712:0,58,255:22,0 chr1 228295453 . A . PASS END=228295454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,74,255:23,0 chr1 228295455 . A . PASS END=228295455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:22,0 chr1 228295456 . A . PASS END=228295456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228295457 . G . PASS END=228295457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,623:0,57,255:23,0 chr1 228295458 . C . PASS END=228295459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 228295460 . T . PASS END=228295460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,699:0,42,255:22,0 chr1 228295461 . G . PASS END=228295467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,817:0,72,255:25,0 chr1 228295468 . C . PASS END=228295468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,664:0,41,255:23,0 chr1 228295469 . A . PASS END=228295471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,820:0,75,255:25,0 chr1 228295472 . C . PASS END=228295472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr1 228295473 . G . PASS END=228295473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,667:0,22,255:24,0 chr1 228295474 . A . PASS END=228295475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,720:0,39,255:25,0 chr1 228295476 . T . PASS END=228295476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,766:0,6,255:23,0 chr1 228295477 . G . PASS END=228295487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,842:0,64,255:26,0 chr1 228295488 . T . PASS END=228295488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:25,0 chr1 228295489 . G . PASS END=228295511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,864:0,61,255:26,0 chr1 228295512 . A . PASS END=228295512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:24,0 chr1 228295513 . T . PASS END=228295531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr1 228295532 . G . PASS END=228295532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:20,0 chr1 228295533 . C . PASS END=228295534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 228295535 . G . PASS END=228295535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 228295536 . G . PASS END=228295540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 228295541 . G . PASS END=228295570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr1 228295678 . C . PASS END=228295687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 228295688 . G . PASS END=228295708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:25,0 chr1 228295709 . A . PASS END=228295709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 228295710 . G . PASS END=228295755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 228295756 . T . PASS END=228295756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 228295757 . G . PASS END=228295758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228295759 . C . PASS END=228295769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,782:0,50,255:19,0 chr1 228295770 . G . PASS END=228295771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228295772 . A . PASS END=228295772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 228295773 . A . PASS END=228295773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228295774 . G . PASS END=228295785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 228295936 . C . PASS END=228295961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:36,0 chr1 228328004 . A . PASS END=228328039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 228328040 . G . PASS END=228328040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 228328041 . C . PASS END=228328064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,65,255:24,0 chr1 228329335 . A . PASS END=228329351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,923:0,62,255:26,0 chr1 228329352 . G . PASS END=228329353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 228329354 . A . PASS END=228329359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 228329360 . T . PASS END=228329360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:24,0 chr1 228329361 . T . PASS END=228329364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228329365 . C . PASS END=228329428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,994:0,80,255:32,0 chr1 228329429 . G . PASS END=228329459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,892:0,71,255:26,0 chr1 228329460 . A . PASS END=228329503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:21,0 chr1 228329504 . C . PASS END=228329504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228329505 . T . PASS END=228329514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:14:0,27,405:0,42,255:9,0 chr1 228329515 . A . PASS END=228329525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 228329526 . G . PASS END=228329526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 228329527 . G . PASS END=228329530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228333197 . T . PASS END=228333199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1003:0,84,255:31,0 chr1 228333200 . T . PASS END=228333200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1009:0,63,255:30,0 chr1 228333201 . C . PASS END=228333350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1186:0,83,255:40,0 chr1 228333727 . A . PASS END=228333768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:38:0,97,1297:0,97,255:40,0 chr1 228334543 . A . PASS END=228334557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr1 228334558 . C . PASS END=228334558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 228334559 . C . PASS END=228334559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 228334560 . A . PASS END=228334561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 228334562 . G . PASS END=228334565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr1 228334566 . G . PASS END=228334568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 228334569 . A . PASS END=228334569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 228334570 . T . PASS END=228334570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr1 228334571 . G . PASS END=228334571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 228334572 . C . PASS END=228334620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 228334621 . G . PASS END=228334626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:25,0 chr1 228334627 . T . PASS END=228334627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:21,0 chr1 228334628 . G . PASS END=228334639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:22,0 chr1 228335107 . C . PASS END=228335107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228335108 . A . PASS END=228335108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 228335109 . A . PASS END=228335120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,917:0,72,255:25,0 chr1 228335121 . A . PASS END=228335124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 228335125 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=1.244;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:7,5,0:5,10,0:48:85,0,49,499,429,928:255,0,255:12,0:5.0000e+01,6.8598e-05,5.2363e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,2,8,7:5,7,6,9 chr1 228335126 . G . PASS END=228335128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 228335129 . C . PASS END=228335130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228335131 . G . PASS END=228335162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1156:0,84,255:33,0 chr1 228335163 . A . PASS END=228335217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,88,255:37,0 chr1 228335218 . T . PASS END=228335218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 228335219 . G . PASS END=228335232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 228335233 . A . PASS END=228335233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr1 228335234 . C . PASS END=228335237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 228335238 . A . PASS END=228335245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,79,255:26,0 chr1 228335316 . G . PASS END=228335324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:25,0 chr1 228335325 . C . PASS END=228335356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 228335357 . C . PASS END=228335357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 228335358 . C . PASS END=228335359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228335360 . G . PASS END=228335360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228335361 . G . PASS END=228335361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228335362 . T . PASS END=228335388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 228335389 . A . PASS END=228335400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 228335935 . G . PASS END=228335977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr1 228335978 . A . PASS END=228335978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 228335979 . G . PASS END=228335985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 228336072 . G . PASS END=228336081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 228336082 . C . PASS END=228336082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 228336083 . G . PASS END=228336086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 228336087 . T . PASS END=228336087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 228336088 . G . PASS END=228336094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228336095 . G . PASS END=228336095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 228336096 . T . PASS END=228336104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:23,0 chr1 228336105 . T . PASS END=228336106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 228336107 . A . PASS END=228336108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228336109 . C . PASS END=228336109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:19,0 chr1 228336110 . G . PASS END=228336111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:23:0,56,855:0,56,255:19,0 chr1 228336112 . C . PASS END=228336114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 228336115 . C . PASS END=228336117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228336118 . G . PASS END=228336118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 228336119 . G . PASS END=228336235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1195:0,87,255:40,0 chr1 228336236 . C . PASS END=228336240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 228336366 . G . PASS END=228336384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,399:0,36,255:13,0 chr1 228336385 . G . PASS END=228336386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 228336387 . A . PASS END=228336387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 228336388 . C . PASS END=228336393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr1 228336394 . C . PASS END=228336394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:14,0 chr1 228336395 . C . PASS END=228336396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228336397 . G . PASS END=228336397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 228336398 . A . PASS END=228336402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 228336403 . T . PASS END=228336403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 228336404 . G . PASS END=228336424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,590:0,40,255:18,0 chr1 228336425 . G . PASS END=228336425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 228336426 . G . PASS END=228336430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,759:0,47,255:19,0 chr1 228336431 . A . PASS END=228336433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228336434 . C . LowGQ END=228336434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,722:0,0,255:20,0 chr1 228336435 . A . PASS END=228336446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:24,0 chr1 228336447 . G . PASS END=228336447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 228336448 . C . PASS END=228336459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,817:0,72,255:24,0 chr1 228336460 . A . PASS END=228336460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr1 228336461 . C . PASS END=228336488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,856:0,61,255:26,0 chr1 228336489 . G . PASS END=228336489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 228336490 . T . PASS END=228336503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 228336504 . A . PASS END=228336521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,676:0,54,255:19,0 chr1 228336522 . G . PASS END=228336522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 228336523 . C . PASS END=228336553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 228337558 . A . PASS END=228337558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 228337561 . A . PASS END=228337561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 228337708 . G . PASS END=228337708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 228345460 . A . LowGQ END=228345463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:14:0,0,257:5,0,255:11,0 chr1 228345464 . C . PASS END=228345464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr1 228345465 . C . PASS END=228345465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:11,0 chr1 228345466 . A . LowGQ END=228345468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,357:0,0,255:11,0 chr1 228345469 . A . PASS END=228345469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr1 228345470 . T . LowGQ END=228345471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,324:30,0,255:11,0 chr1 228345472 . A . PASS END=228345472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:11,0 chr1 228345473 . G . LowGQ END=228345475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,377:8,0,255:11,0 chr1 228345476 . G . PASS END=228345476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:12,0 chr1 228345477 . G . LowGQ END=228345478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,408:2,0,255:12,0 chr1 228345479 . G . PASS END=228345479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr1 228345480 . C . LowGQ END=228345481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:19,0,255:12,0 chr1 228345482 . T . PASS END=228345482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,459:0,14,255:12,0 chr1 228345483 . C . LowGQ END=228345483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,385:27,0,255:12,0 chr1 228345484 . C . PASS END=228345484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:12,0 chr1 228345485 . T . LowGQ END=228345486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,401:0,0,255:12,0 chr1 228345487 . A . PASS END=228345487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:12,0 chr1 228345488 . C . LowGQ END=228345489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:5,0,255:12,0 chr1 228345490 . C . PASS END=228345490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:12,0 chr1 228345491 . G . PASS END=228345491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:12,0 chr1 228345492 . G . LowGQ END=228345492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,426:10,0,255:12,0 chr1 228345493 . C . PASS END=228345493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,445:0,14,255:12,0 chr1 228345494 . T . LowGQ END=228345494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:27,0,255:12,0 chr1 228345495 . G . PASS END=228345495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 228345496 . C . LowGQ END=228345497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:27,0,255:12,0 chr1 228345498 . G . PASS END=228345498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 228345499 . G . PASS END=228345499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 228345500 . A . LowGQ END=228345500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:27,0,255:12,0 chr1 228345501 . G . PASS END=228345501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:12,0 chr1 228345502 . G . PASS END=228345502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 228345503 . A . LowGQ END=228345503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:27,0,255:11,0 chr1 228345504 . G . PASS END=228345504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 228345505 . A . LowGQ END=228345505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:1,0,255:14,0 chr1 228345506 . T . PASS END=228345506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 228345507 . C . PASS END=228345507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:16,0 chr1 228345508 . C . PASS END=228345508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:16,0 chr1 228345509 . A . PASS END=228345509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 228345510 . C . PASS END=228345510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:16,0 chr1 228345511 . A . PASS END=228345512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 228345513 . C . PASS END=228345514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:18:0,2,551:0,2,255:16,0 chr1 228345515 . A . PASS END=228345516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:16,0 chr1 228345517 . T . PASS END=228345517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:16,0 chr1 228345518 . C . LowGQ END=228345519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,582:0,0,255:16,0 chr1 228345520 . A . PASS END=228345520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:15,0 chr1 228345521 . C . PASS END=228345521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:15,0 chr1 228345522 . C . PASS END=228345522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 228345523 . T . LowGQ END=228345525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,549:0,0,255:15,0 chr1 228345526 . G . PASS END=228345527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:13,0 chr1 228345528 . G . LowGQ END=228345528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:13,0 chr1 228345529 . G . PASS END=228345530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:13,0 chr1 228345531 . C . LowGQ END=228345531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:13,0 chr1 228345532 . A . PASS END=228345532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:12,0 chr1 228345533 . A . LowGQ END=228345533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:1,0,255:13,0 chr1 228345534 . G . PASS END=228345534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:13,0 chr1 228345535 . G . PASS END=228345535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:14,0 chr1 228345536 . T . PASS END=228345536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:16,0 chr1 228345537 . G . PASS END=228345538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,720:0,44,255:16,0 chr1 228345539 . G . PASS END=228345539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 228345540 . G . PASS END=228345540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228345541 . C . PASS END=228345541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 228345542 . T . PASS END=228345542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228345543 . C . PASS END=228345546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 228345547 . G . PASS END=228345547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 228345548 . T . PASS END=228345548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr1 228345549 . G . PASS END=228345593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,629:0,43,255:19,0 chr1 228345594 . C . PASS END=228345606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:23,0 chr1 228345607 . G . PASS END=228345607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 228345608 . A . PASS END=228345623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:25,0 chr1 228345624 . T . PASS END=228345625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 228345626 . G . PASS END=228345642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:26,0 chr1 228345643 . G . PASS END=228345644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 228345645 . C . PASS END=228345692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,845:0,65,255:25,0 chr1 228345693 . C . PASS END=228345693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 228345694 . T . PASS END=228345698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228345699 . G . PASS END=228345699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 228345700 . G . PASS END=228345723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:23,0 chr1 228345724 . A . PASS END=228345724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 228345725 . C . PASS END=228345729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 228345730 . T . PASS END=228345748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr1 228345749 . A . PASS END=228345768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr1 228345769 . C . PASS END=228345769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228345770 . G . PASS END=228345770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:8,0 chr1 228345771 . T . PASS END=228345804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,255:9,0 chr1 228345805 . C . PASS END=228345820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,249:6,0 chr1 228345821 . G . PASS END=228345858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 228345859 . G . PASS END=228345881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 228345882 . G . PASS END=228345926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 228345927 . G . PASS END=228345973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,374:0,30,255:11,0 chr1 228345974 . C . PASS END=228345974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 228345975 . A . PASS END=228346003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 228346004 . T . LowGQ END=228346004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,357:8,0,255:11,0 chr1 228346005 . C . PASS END=228346006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 228346007 . G . PASS END=228346011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 228346012 . G . PASS END=228346013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228346014 . C . PASS END=228346018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228346019 . A . PASS END=228346048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 228346049 . A . PASS END=228346050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228346051 . C . PASS END=228346071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 228346072 . C . PASS END=228346075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228346076 . G . PASS END=228346078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 228346079 . A . PASS END=228346091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,349:0,27,255:9,0 chr1 228346092 . C . PASS END=228346121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 228346122 . A . PASS END=228346155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 228346156 . C . PASS END=228346176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr1 228346177 . C . PASS END=228346178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 228346179 . A . PASS END=228346179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 228346180 . C . PASS END=228346195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 228346196 . G . PASS END=228346196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 228346197 . C . PASS END=228346216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,681:0,41,255:19,0 chr1 228346217 . T . PASS END=228346219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 228346220 . T . PASS END=228346220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 228346221 . G . PASS END=228346237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,884:0,69,255:23,0 chr1 228346238 . G . PASS END=228346238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:21,0 chr1 228346239 . C . PASS END=228346239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 228346240 . C . PASS END=228346240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 228346241 . C . PASS END=228346263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,870:0,62,255:25,0 chr1 228346264 . C . PASS END=228346264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 228346265 . T . PASS END=228346267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 228346268 . T . PASS END=228346268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 228346269 . T . PASS END=228346273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr1 228346274 . A . PASS END=228346275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,836:0,42,255:24,0 chr1 228346276 . G . PASS END=228346277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 228346278 . G . PASS END=228346278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,747:0,20,255:22,0 chr1 228346279 . G . PASS END=228346281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 228346282 . A . PASS END=228346282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 228346283 . G . PASS END=228346297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 228346298 . T . PASS END=228346298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 228346299 . G . PASS END=228346303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228346304 . A . PASS END=228346304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:20,0 chr1 228346305 . C . PASS END=228346307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr1 228346308 . C . PASS END=228346309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 228346310 . G . PASS END=228346331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr1 228346332 . G . PASS END=228346336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 228346337 . G . PASS END=228346346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:18:0,30,450:0,38,255:13,0 chr1 228346347 . C . PASS END=228346352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:13:0,24,360:0,39,255:8,0 chr1 228346353 . G . PASS END=228346373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,255:6,0 chr1 228346374 . G . LowDepth;LowGQ END=228346421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 228346422 . T . PASS END=228346451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr1 228346452 . C . PASS END=228346452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 228346453 . G . LowGQ END=228346456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 228346457 . A . PASS END=228346458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 228346459 . A . LowGQ END=228346459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 228346460 . G . PASS END=228346460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 228346461 . C . LowGQ END=228346461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:5,0 chr1 228346462 . C G, 0.06 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.731;ReadPosRankSum=-0.731;FractionInformativeReads=0.714;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:2,1,0:2,0,0:18:16,0,47,28,81,142:13,0,131:5,0:6.2031e-02,1.8490e+01,6.8483e+01,4.6408e+01,1.3383e+02,1.6374e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,0,0,1:2,2,0,1 chr1 228346463 . T . LowGQ END=228346463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:21,0,154:5,0 chr1 228346464 . G . PASS END=228346465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 228346466 . T . LowGQ END=228346466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:5,0 chr1 228346467 . G . PASS END=228346468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 228346469 . T . LowGQ END=228346469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:5,0 chr1 228346470 . G . PASS END=228346470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 228346471 . C . LowGQ END=228346471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:21,0,154:5,0 chr1 228346472 . G . PASS END=228346473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 228346474 . G . LowGQ END=228346475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,200:0,0,209:7,0 chr1 228346476 . G . PASS END=228346476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 228346477 . G . PASS END=228346477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 228346478 . C . PASS END=228346478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,227:0,24,227:8,0 chr1 228346479 . C . LowGQ END=228346483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,155:0,0,164:7,0 chr1 228346484 . G . PASS END=228346484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:8,0 chr1 228346485 . C . PASS END=228346485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 228346486 . G . PASS END=228346486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr1 228346487 . C . LowGQ END=228346487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,219:4,0,223:8,0 chr1 228346488 . T . PASS END=228346488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,215:0,27,215:9,0 chr1 228346489 . C . LowGQ END=228346489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,233:12,0,245:8,0 chr1 228346490 . G . PASS END=228346490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 228346491 . G . PASS END=228346495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 228346496 . A . LowGQ END=228346497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:8,0 chr1 228346498 . G . PASS END=228346503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 228346504 . A . PASS END=228346504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 228346505 . A . PASS END=228346507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,297:0,30,255:10,0 chr1 228346508 . T . LowGQ END=228346508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,263:17,0,255:8,0 chr1 228346509 . G . PASS END=228346516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:11,0 chr1 228346517 . T . LowGQ END=228346517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,286:0,0,255:9,0 chr1 228346518 . G . PASS END=228346531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr1 228346532 . T . PASS END=228346532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 228346533 . G . PASS END=228346535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 228346536 . C . PASS END=228346544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,444:0,42,255:14,0 chr1 228346545 . A . PASS END=228346545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr1 228346546 . G . PASS END=228346546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 228346547 . C . PASS END=228346548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 228346549 . G . PASS END=228346549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 228346550 . C . PASS END=228346551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr1 228346552 . G . PASS END=228346552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 228346553 . G . PASS END=228346558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 228346559 . G . PASS END=228346559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr1 228346560 . C . PASS END=228346563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228346564 . C . PASS END=228346564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 228346565 . G . PASS END=228346573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:18,0 chr1 228346574 . C . PASS END=228346575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 228346576 . C . PASS END=228346576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:15,0 chr1 228346577 . C . PASS END=228346584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,592:0,40,255:17,0 chr1 228346585 . G . PASS END=228346585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr1 228346586 . G . PASS END=228346609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,46,255:19,0 chr1 228346610 . C . PASS END=228346610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 228346611 . C . PASS END=228346614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 228346615 . A . PASS END=228346615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 228346616 . G . PASS END=228346676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,617:0,44,255:19,0 chr1 228346677 . G . PASS END=228346686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:21,0 chr1 228346687 . G . PASS END=228346688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,723:0,49,255:19,0 chr1 228346689 . C . PASS END=228346694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228346695 . C . PASS END=228346696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr1 228346697 . A . PASS END=228346697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228346698 . G . PASS END=228346698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 228346699 . C . PASS END=228346703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 228346704 . A . PASS END=228346704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 228346705 . G . PASS END=228346709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228346710 . C . PASS END=228346719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,52,255:19,0 chr1 228346720 . G . PASS END=228346721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 228346722 . T . PASS END=228346737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,676:0,43,255:19,0 chr1 228346738 . A . PASS END=228346738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr1 228346739 . G . PASS END=228346744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 228346745 . G . PASS END=228346745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:17,0 chr1 228346746 . C . PASS END=228346758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,613:0,40,255:18,0 chr1 228346759 . A . PASS END=228346759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:15,0 chr1 228346760 . A . PASS END=228346763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228346764 . C . PASS END=228346764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 228346765 . A . PASS END=228346779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 228353518 . A . PASS END=228353521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 228353522 . C T, 2.12 DRAGENSnpHardQUAL DP=2;MQ=250.00;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:1,0,0:0,1,0:4:33,0,25,36,28,64:33,0,25:1,0:2.1213e+00,4.1378e+00,3.1885e+01,3.9898e+01,6.6664e+01,7.0655e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,1,1,0:0,1,0,1 chr1 228353523 . G . PASS END=228353534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:3,0 chr1 228353535 . G . PASS END=228353559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 228353560 . G . PASS END=228353568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 228353569 . G . PASS END=228353600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 228353601 . G . PASS END=228353611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 228353612 . C . PASS END=228353612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 228353613 . C . PASS END=228353652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr1 228353653 . G . PASS END=228353655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 228353656 . G . PASS END=228353664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 228353665 . T . LowGQ END=228353665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr1 228353666 . G . PASS END=228353686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,402:0,33,255:13,0 chr1 228353687 . C . PASS END=228353692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 228353693 . T . PASS END=228353693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 228353694 . G . PASS END=228353707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 228353708 . C . PASS END=228353718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 228353719 . C . PASS END=228353743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,629:0,45,255:17,0 chr1 228353744 . A . PASS END=228353748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:38:18:0,38,585:0,38,255:13,0 chr1 228353749 . C . PASS END=228353755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:15,0 chr1 228353756 . T . PASS END=228353756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 228353757 . T . PASS END=228353780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:17,0 chr1 228353781 . C G, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.266;ReadPosRankSum=2.060;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,11,0:0.647,0.000:17:4,5,0:2,6,0:47:85,0,47,356,214,570:255,0,182:5,0:5.0000e+01,8.7237e-05,4.9965e+01,3.5590e+02,2.4869e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,6,5:4,2,8,3 chr1 228353782 . C . PASS END=228353793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:17,0 chr1 228353794 . C . PASS END=228353794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 228353795 . G . PASS END=228353803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 228353804 . A . PASS END=228353804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 228353805 . C . PASS END=228353811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,645:0,54,255:18,0 chr1 228353812 . T . PASS END=228353812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 228353813 . T . PASS END=228353818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228353819 . A . PASS END=228353824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,643:0,51,255:17,0 chr1 228353825 . A . PASS END=228353848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,31,255:13,0 chr1 228353849 . T . PASS END=228353849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr1 228353850 . C . PASS END=228353857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 228353858 . G . PASS END=228353858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:8,0 chr1 228353859 . G . PASS END=228353859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228362393 . G . PASS END=228362395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 228362396 . C . PASS END=228362429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 228362430 . G . PASS END=228362444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 228362445 . G . PASS END=228362447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228362448 . C . PASS END=228362448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 228362449 . A . PASS END=228362454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 228362455 . C . PASS END=228362455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 228362456 . G . PASS END=228362462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,884:0,66,255:23,0 chr1 228362463 . A . PASS END=228362464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 228362465 . G . PASS END=228362466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228362467 . A . PASS END=228362467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 228362468 . C . PASS END=228362481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,886:0,69,255:26,0 chr1 228362482 . G . PASS END=228362486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 228362487 . C . PASS END=228362487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr1 228362488 . G . PASS END=228362488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 228362489 . G . PASS END=228362502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228362503 . T . PASS END=228362503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 228362504 . G . PASS END=228362505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 228362506 . A . PASS END=228362506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr1 228362507 . G . PASS END=228362527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 228362528 . G . PASS END=228362532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr1 228362533 . C . PASS END=228362533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 228362534 . G . PASS END=228362534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228362535 . G . PASS END=228362537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228362538 . T . PASS END=228362580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 228362581 . A . PASS END=228362583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:22:0,54,810:0,66,255:19,0 chr1 228362584 . G . PASS END=228362587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 228362588 . A . PASS END=228362589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 228362590 . G . PASS END=228362601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 228362602 . T . PASS END=228362605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228362606 . C . PASS END=228362616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:20,0 chr1 228362617 . C . PASS END=228362644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,690:0,44,255:19,0 chr1 228362645 . C . PASS END=228362669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:18,0 chr1 228362670 . C . PASS END=228362681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 228362682 . G A, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.204;ReadPosRankSum=1.276;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:5,4,0:2,3,0:48:85,0,50,185,250,435:177,0,229:7,0:5.0000e+01,6.5233e-05,5.3000e+01,1.8470e+02,2.8511e+02,4.3812e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,4,3:6,1,5,2 chr1 228362683 . G . PASS END=228362683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228362684 . C . PASS END=228362690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 228362691 . G . PASS END=228362719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,374:0,33,255:13,0 chr1 228362720 . A . PASS END=228362728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 228362729 . A . PASS END=228362730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228362823 . G . PASS END=228362849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,646:0,54,255:19,0 chr1 228362850 . C . PASS END=228362866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:26,0 chr1 228362867 . C . PASS END=228362879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 228362880 . A . PASS END=228362880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 228362881 . C . PASS END=228362884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 228362885 . G . PASS END=228362902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:27:0,69,1031:0,71,255:26,0 chr1 228362903 . A . PASS END=228362905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228362906 . T . PASS END=228362921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 228362922 . A . PASS END=228362951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,979:0,81,255:31,0 chr1 228362952 . A . PASS END=228362952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 228362953 . C . PASS END=228363118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1164:0,80,255:40,0 chr1 228363119 . A . PASS END=228363119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1211:0,53,255:32,0 chr1 228363120 . A . PASS END=228363166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1345:0,84,255:38,0 chr1 228363167 . G . PASS END=228363167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:34,0 chr1 228363168 . C . PASS END=228363194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,96,255:37,0 chr1 228363195 . G . PASS END=228363195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 228363196 . G . PASS END=228363200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:27,0 chr1 228363201 . C . PASS END=228363214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,67,255:23,0 chr1 228399485 . A . PASS END=228399490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 228399491 . C . PASS END=228399491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 228399492 . A . PASS END=228399494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr1 228399495 . C . PASS END=228399495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 228399496 . A . PASS END=228399497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 228399498 . A . PASS END=228399498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228399499 . G . PASS END=228399499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 228399500 . T . PASS END=228399501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228399502 . C . PASS END=228399502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 228399503 . A . PASS END=228399503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr1 228399504 . G . PASS END=228399504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228399505 . C . PASS END=228399505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:11:15:0,11,344:0,11,255:12,0 chr1 228399506 . G . PASS END=228399509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 228399510 . C . LowGQ END=228399510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,327:5,0,255:12,0 chr1 228399511 . G . PASS END=228399511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 228399512 . C . PASS END=228399512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:14,0 chr1 228399513 . C . PASS END=228399514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr1 228399515 . C . PASS END=228399515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 228399516 . G . LowGQ END=228399516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,360:3,0,255:13,0 chr1 228399517 . C . PASS END=228399517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 228399518 . T . PASS END=228399518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,410:0,12,255:13,0 chr1 228399519 . T . PASS END=228399519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 228399520 . T . PASS END=228399520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:47:16:0,47,448:0,47,255:16,0 chr1 228399521 . C . PASS END=228399521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,421:0,15,255:14,0 chr1 228399522 . T . PASS END=228399522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,544:0,48,255:16,0 chr1 228399523 . C . LowGQ END=228399523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,394:2,0,255:13,0 chr1 228399524 . A . PASS END=228399526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:15,0 chr1 228399527 . C . PASS END=228399527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 228399528 . G . LowGQ END=228399528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,402:2,0,255:13,0 chr1 228399529 . G . PASS END=228399530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 228399531 . C . PASS END=228399532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 228399533 . A . PASS END=228399533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,441:0,1,255:14,0 chr1 228399534 . A . PASS END=228399534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:16,0 chr1 228399535 . G . LowGQ END=228399535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,434:13,0,255:13,0 chr1 228399536 . G . PASS END=228399536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,446:0,20,255:15,0 chr1 228399537 . C . PASS END=228399539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,497:0,34,255:15,0 chr1 228399540 . T . PASS END=228399540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 228399541 . C . PASS END=228399541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,448:0,34,255:13,0 chr1 228399542 . G . PASS END=228399542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:13,0 chr1 228399543 . T . PASS END=228399544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr1 228399545 . G . PASS END=228399546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 228399547 . G . PASS END=228399547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 228399548 . T . PASS END=228399548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228399549 . C . PASS END=228399549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,443:0,15,255:14,0 chr1 228399550 . G . PASS END=228399550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr1 228399551 . G . PASS END=228399552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:15:16:0,15,471:0,15,255:15,0 chr1 228399553 . G . PASS END=228399556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 228399557 . A . PASS END=228399557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:14,0 chr1 228399558 . A . PASS END=228399558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr1 228399559 . G . PASS END=228399560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,529:0,34,255:13,0 chr1 228399561 . A . PASS END=228399561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,493:0,15,255:14,0 chr1 228399562 . C . PASS END=228399562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,524:0,4,255:11,0 chr1 228399563 . G . PASS END=228399563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:13,0 chr1 228399564 . C . PASS END=228399564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:13,0 chr1 228399565 . C . PASS END=228399565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:13,0 chr1 228399566 . A . PASS END=228399566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,527:0,21,255:13,0 chr1 228399567 . C . LowGQ END=228399567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,533:1,0,255:13,0 chr1 228399568 . C . PASS END=228399569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 228399570 . T . PASS END=228399570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 228399571 . C . PASS END=228399572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228399573 . G . PASS END=228399574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,535:0,31,255:14,0 chr1 228399575 . T . PASS END=228399575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 228399576 . G . PASS END=228399576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 228399577 . C . PASS END=228399580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 228399581 . A . PASS END=228399581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 228399582 . T . PASS END=228399582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 228399583 . C . PASS END=228399583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 228399584 . G . PASS END=228399592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,607:0,40,255:19,0 chr1 228399593 . C . PASS END=228399593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:14,0 chr1 228399594 . C . PASS END=228399596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:16,0 chr1 228399597 . C . PASS END=228399600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,41,255:13,0 chr1 228399601 . A . PASS END=228399601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:13,0 chr1 228399602 . C . PASS END=228399603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 228399604 . G . PASS END=228399604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:10,0 chr1 228399605 . G . PASS END=228399609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,495:0,32,255:12,0 chr1 228399610 . C . PASS END=228399610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 228399611 . T . PASS END=228399614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228399615 . A . PASS END=228399615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 228399616 . G . PASS END=228399616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228399617 . A . PASS END=228399617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 228399618 . A . PASS END=228399627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 228399628 . G . LowGQ END=228399628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr1 228399629 . C . PASS END=228399633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 228399634 . G . PASS END=228399648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,451:0,39,255:13,0 chr1 228399649 . C . PASS END=228399649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 228399650 . T . PASS END=228399650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 228399651 . T . PASS END=228399663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,466:0,39,255:13,0 chr1 228399664 . G . PASS END=228399668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228399669 . G . PASS END=228399670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228399671 . G A, 34.91 PASS DP=14;MQ=250.00;MQRankSum=2.933;ReadPosRankSum=0.800;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,5,0:0.357,0.000:14:6,2,0:3,3,0:35:70,0,50,121,322,443:107,0,255:9,0:3.4915e+01,1.4227e-03,5.3001e+01,1.2125e+02,3.5666e+02,4.4552e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,1,4:6,3,2,3 chr1 228399672 . A . PASS END=228399687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 228399688 . T . PASS END=228399688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 228399689 . A . PASS END=228399689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 228399690 . T . PASS END=228399690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 228399691 . C . PASS END=228399705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 228399706 . G . PASS END=228399706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228399707 . G . PASS END=228399707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 228399708 . G . PASS END=228399708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228399709 . C . PASS END=228399722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr1 228399723 . A . PASS END=228399723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr1 228399724 . C . PASS END=228399728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr1 228399729 . G . PASS END=228399739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 228399740 . A . PASS END=228399740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 228399741 . A . PASS END=228399765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 228399766 . T C, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.165;ReadPosRankSum=2.797;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,8,0:0.571,0.000:14:3,6,0:3,2,0:48:85,0,49,257,208,466:246,0,168:5,0:5.0000e+01,6.7822e-05,5.2487e+01,2.5731e+02,2.4319e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,3,5:3,3,3,5 chr1 228399767 . G . PASS END=228399803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,443:0,36,255:13,0 chr1 228399804 . A . PASS END=228399808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr1 228399809 . G . PASS END=228399815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228399816 . A . PASS END=228399844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 228399845 . G . PASS END=228399845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 228399846 . T . PASS END=228399875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:13,0 chr1 228399876 . G . PASS END=228399898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 228399899 . C . PASS END=228399905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 228399906 . T . PASS END=228399909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 228399910 . C . PASS END=228399919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 228399920 . G . PASS END=228399926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228399927 . G . PASS END=228399954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 228399955 . C . PASS END=228399955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 228399956 . G . PASS END=228399988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 228399989 . C . PASS END=228400009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,272:0,24,255:8,0 chr1 228400010 . C . PASS END=228400032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,225:6,0 chr1 228400033 . G . PASS END=228400036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 228400037 . C . PASS END=228400037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr1 228400038 . G . PASS END=228400079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,164:6,0 chr1 228400080 . T . PASS END=228400097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 228400098 . C . PASS END=228400116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 228400117 . G . PASS END=228400138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 228400139 . C . PASS END=228400139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 228400140 . T . PASS END=228400143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228400144 . G . PASS END=228400151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228400152 . T . LowGQ END=228400152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:11,0 chr1 228400153 . G . PASS END=228400167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:13,0 chr1 228400168 . G . PASS END=228400169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228400170 . C . PASS END=228400170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 228400171 . T . PASS END=228400172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228400173 . T . PASS END=228400173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 228400174 . G . PASS END=228400181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228400182 . A . PASS END=228400182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228400183 . G . PASS END=228400230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr1 228400231 . G . PASS END=228400255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 228400256 . A . PASS END=228400277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,676:0,43,255:19,0 chr1 228400278 . C . PASS END=228400279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 228400280 . A . PASS END=228400281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228400282 . G . PASS END=228400289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228400290 . C . PASS END=228400300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:18,0 chr1 228400301 . A . PASS END=228400301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,596:0,15,255:14,0 chr1 228400302 . A . PASS END=228400303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 228400304 . G . PASS END=228400304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 228400305 . A . PASS END=228400327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:17,0 chr1 228400328 . C . PASS END=228400328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 228400329 . G . PASS END=228400337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:17,0 chr1 228400338 . T . PASS END=228400350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:13:0,30,450:0,39,255:12,0 chr1 228400351 . C . PASS END=228400356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,405:0,20,255:9,0 chr1 228400357 . G . PASS END=228400360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 228400361 . A . PASS END=228400361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:10,0 chr1 228400362 . A . PASS END=228400364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,344:0,33,255:11,0 chr1 228400365 . T . PASS END=228400365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 228400366 . C . PASS END=228400378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,344:0,33,255:12,0 chr1 228400379 . C . PASS END=228400379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 228400380 . T . PASS END=228400381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 228400382 . T . PASS END=228400382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 228400383 . T . PASS END=228400390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr1 228400391 . C . PASS END=228400393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228400394 . T . PASS END=228400396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228400397 . G . PASS END=228400397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 228400398 . A . PASS END=228400399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228400400 . C . PASS END=228400400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr1 228400401 . G . PASS END=228400406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:17,0 chr1 228400407 . T . PASS END=228400407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 228400408 . C . PASS END=228400445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,621:0,44,255:19,0 chr1 228400446 . A . PASS END=228400450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 228400451 . T . PASS END=228400466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 228400467 . T . PASS END=228400467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 228400468 . G . PASS END=228400469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 228400470 . G . PASS END=228400472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 228401142 . A . PASS END=228401149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 228401150 . G . PASS END=228401185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 228401186 . C . PASS END=228401186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 228401187 . G . PASS END=228401187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 228401188 . G . PASS END=228401188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 228401189 . G . PASS END=228401208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:18,0 chr1 228401209 . C . PASS END=228401217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 228401218 . G . PASS END=228401218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 228401219 . G . PASS END=228401221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr1 228401222 . C . PASS END=228401222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:20,0 chr1 228401223 . C . PASS END=228401224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 228401225 . C . PASS END=228401230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228401231 . T . PASS END=228401247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,706:0,50,255:19,0 chr1 228401248 . G . PASS END=228401251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 228401252 . A . PASS END=228401253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 228401254 . G . PASS END=228401255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228401256 . A . PASS END=228401257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr1 228401258 . G . PASS END=228401261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228401262 . C . PASS END=228401265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 228401266 . G . PASS END=228401281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr1 228401282 . A . PASS END=228401341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,562:0,40,255:19,0 chr1 228401342 . G . PASS END=228401342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr1 228401343 . A . PASS END=228401347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 228401348 . G . PASS END=228401366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,35,255:12,0 chr1 228401367 . A . PASS END=228401367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,413:0,3,255:10,0 chr1 228401368 . G . PASS END=228401369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 228401370 . C . LowGQ END=228401371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,393:0,0,255:9,0 chr1 228401372 . C . PASS END=228401373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 228401374 . A . PASS END=228401374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 228401375 . G . PASS END=228401378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 228401379 . G . PASS END=228401379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 228401380 . C . PASS END=228401380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228401381 . A . LowGQ END=228401381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:9,0 chr1 228401382 . G . PASS END=228401382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 228401383 . C . PASS END=228401385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228401386 . C . PASS END=228401387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 228401388 . C . PASS END=228401390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 228401391 . T . PASS END=228401391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 228401392 . G . PASS END=228401393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 228401394 . C . PASS END=228401394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 228401395 . G . PASS END=228401395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 228401396 . G . PASS END=228401396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 228401397 . A . PASS END=228401399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr1 228401400 . T . PASS END=228401400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 228401401 . C . PASS END=228401403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 228401404 . A . LowGQ END=228401404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:6,0 chr1 228401405 . G . PASS END=228401405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 228401406 . T . PASS END=228401411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:9:0,11,270:0,11,255:6,0 chr1 228401875 . G . PASS END=228401897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 228401898 . C . PASS END=228401901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 228401902 . A . PASS END=228401902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 228401903 . G . PASS END=228401904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 228401905 . C . PASS END=228401905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 228401906 . G . PASS END=228401909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr1 228401910 . G . PASS END=228401930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:17,0 chr1 228401931 . A . PASS END=228401931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 228401932 . T . PASS END=228401934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228401935 . T G, 45.80 PASS DP=18;MQ=250.00;MQRankSum=3.325;ReadPosRankSum=-0.890;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,6,0:0.333,0.000:18:6,2,0:6,4,0:45:81,0,50,215,392,607:179,0,255:12,0:4.5798e+01,1.3590e-04,5.3000e+01,2.1454e+02,4.2717e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,2,3,3:8,4,5,1 chr1 228401936 . T . PASS END=228401949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr1 228401950 . C . PASS END=228401950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 228401951 . G . PASS END=228401955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 228401956 . C . PASS END=228401956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 228401957 . G . PASS END=228401970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:18,0 chr1 228401971 . A . PASS END=228401971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 228401972 . C . PASS END=228401972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228401973 . T . PASS END=228402009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 228402010 . G . PASS END=228402010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228402011 . C . PASS END=228402012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228402013 . T . PASS END=228402021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228402022 . C . PASS END=228402033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr1 228402034 . C . PASS END=228402039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:19,0 chr1 228402040 . A . PASS END=228402041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 228402042 . A . PASS END=228402046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:17,0 chr1 228402047 . A G, 45.51 PASS DP=23;MQ=249.96;MQRankSum=3.841;ReadPosRankSum=1.323;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:7,4,0:8,4,0:45:80,0,50,285,508,793:241,0,255:11,0:4.5509e+01,1.4393e-04,5.3000e+01,2.8496e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,4,4:10,5,4,4 chr1 228402048 . A . PASS END=228402051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:16,0 chr1 228402052 . T . PASS END=228402052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 228402053 . C . PASS END=228402069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 228402070 . A . PASS END=228402078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228402079 . G . PASS END=228402081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 228402082 . A . PASS END=228402084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228402085 . T . PASS END=228402085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 228402086 . G . PASS END=228402089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 228402090 . T . PASS END=228402090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:11,0 chr1 228402091 . T . PASS END=228402097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 228402098 . T . PASS END=228402099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr1 228402100 . G . PASS END=228402120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr1 228402121 . A G, 49.27 PASS DP=13;MQ=250.00;MQRankSum=2.793;ReadPosRankSum=-0.529;FractionInformativeReads=0.923;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,5,0:0.417,0.000:12:3,2,0:4,3,0:48:84,0,50,171,250,421:163,0,232:7,0:4.9271e+01,7.2999e-05,5.3000e+01,1.7083e+02,2.8518e+02,4.2424e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,2,3:5,2,1,4 chr1 228402122 . G . PASS END=228402123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 228402124 . T . PASS END=228402124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 228402125 . C . PASS END=228402135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 228402491 . C . PASS END=228402497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 228402498 . G . PASS END=228402498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 228402499 . A . PASS END=228402507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 228402508 . C T, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=2.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,8,0:0.667,0.000:12:0,4,0:4,4,0:47:85,0,47,286,139,425:255,0,119:3,0:5.0000e+01,8.6460e-05,5.0047e+01,2.8610e+02,1.7368e+02,4.2800e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,6,2:3,1,6,2 chr1 228402509 . T . PASS END=228402528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,474:0,36,255:13,0 chr1 228402529 . G . PASS END=228402542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:19,0 chr1 228402543 . G . PASS END=228402545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228402546 . G . PASS END=228402549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 228402550 . A . PASS END=228402550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 228402551 . G . PASS END=228402554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr1 228402555 . C . PASS END=228402556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr1 228402557 . T . PASS END=228402557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,720:0,11,255:17,0 chr1 228402558 . G . PASS END=228402558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228402559 . A . PASS END=228402566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228402567 . C . PASS END=228402567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 228402568 . T . PASS END=228402589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:26,0 chr1 228402590 . A . PASS END=228402600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr1 228402601 . A . PASS END=228402603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 228402604 . A . PASS END=228402614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 228402615 . C . PASS END=228402615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 228402616 . C . PASS END=228402619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 228402620 . T . PASS END=228402627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 228402628 . A . PASS END=228402630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228402631 . A . PASS END=228402631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,808:0,51,255:26,0 chr1 228402632 . A . PASS END=228402670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:28:0,82,1028:0,82,255:32,0 chr1 228402671 . A . PASS END=228402671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:31,0 chr1 228402672 . A . PASS END=228402782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1211:0,82,255:40,0 chr1 228402783 . G . PASS END=228402793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,77,255:26,0 chr1 228402794 . A . PASS END=228402794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:24,0 chr1 228402795 . C . PASS END=228402799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr1 228403264 . C . PASS END=228403288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:19,0 chr1 228403289 . G . PASS END=228403316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:25,0 chr1 228403317 . G . PASS END=228403318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr1 228403319 . C . PASS END=228403324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:26,0 chr1 228403325 . C . PASS END=228403329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 228403330 . T . PASS END=228403333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228403334 . C . PASS END=228403337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228403338 . G . PASS END=228403345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 228403346 . G . PASS END=228403346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr1 228403347 . G . PASS END=228403396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,908:0,64,255:26,0 chr1 228403397 . C . PASS END=228403398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 228403399 . G . PASS END=228403420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,834:0,75,255:25,0 chr1 228403421 . T . PASS END=228403421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr1 228403422 . C . PASS END=228403467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,886:0,72,255:25,0 chr1 228403468 . A . PASS END=228403470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr1 228403471 . G . PASS END=228403518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr1 228403519 . T . PASS END=228403530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 228404122 . C . PASS END=228404124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 228404125 . C . PASS END=228404156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 228404157 . G . PASS END=228404157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 228404158 . C . PASS END=228404160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 228404161 . C . PASS END=228404162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228404163 . G . PASS END=228404165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228404166 . C . PASS END=228404166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 228404167 . G . PASS END=228404179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,599:0,48,255:18,0 chr1 228404180 . T . PASS END=228404180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 228404181 . C . PASS END=228404182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228404183 . G . PASS END=228404183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 228404184 . C . PASS END=228404200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr1 228404201 . G . PASS END=228404202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228404203 . T . PASS END=228404212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228404213 . G . PASS END=228404228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 228404229 . G . PASS END=228404229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr1 228404230 . C . PASS END=228404233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:22,0 chr1 228404234 . T . PASS END=228404234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 228404235 . G . PASS END=228404281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 228404282 . T . PASS END=228404282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 228404283 . G . PASS END=228404306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,923:0,64,255:24,0 chr1 228404307 . C . PASS END=228404307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr1 228404308 . G . PASS END=228404315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 228404316 . C . PASS END=228404318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228404319 . G . PASS END=228404339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:21,0 chr1 228404340 . G . PASS END=228404348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 228404349 . C . PASS END=228404355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 228404356 . A . PASS END=228404365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 228404366 . C . PASS END=228404386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228404387 . C . PASS END=228404403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 228404714 . G . PASS END=228404723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 228404724 . C . PASS END=228404726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 228404727 . T . PASS END=228404730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228404731 . C . PASS END=228404736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228404737 . G . PASS END=228404737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228404738 . A . PASS END=228404763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 228404764 . G . PASS END=228404764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr1 228404765 . T . PASS END=228404777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,868:0,69,255:26,0 chr1 228404778 . G . PASS END=228404782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr1 228404783 . A . PASS END=228404783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 228404784 . G . PASS END=228404793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,890:0,84,255:29,0 chr1 228404794 . G . PASS END=228404794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 228404795 . A . PASS END=228404795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228404796 . G . PASS END=228404796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr1 228404797 . A . PASS END=228404814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr1 228404815 . C . PASS END=228404815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 228404816 . A . PASS END=228404819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228404820 . G . PASS END=228404826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:27,0 chr1 228404827 . T . PASS END=228404827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228404828 . A . PASS END=228404829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1031:0,60,255:27,0 chr1 228404830 . A . PASS END=228404830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228404831 . A . PASS END=228404834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1024:0,71,255:27,0 chr1 228404835 . T . PASS END=228404839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 228404840 . T . PASS END=228404841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228404842 . G . PASS END=228404860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1186:0,83,255:30,0 chr1 228404861 . A . PASS END=228404861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:28,0 chr1 228404862 . G . PASS END=228404939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1066:0,82,255:36,0 chr1 228404940 . C . PASS END=228404971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr1 228404972 . T . PASS END=228404972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 228404973 . C . PASS END=228404985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 228404986 . T . PASS END=228404986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 228404987 . C . PASS END=228404989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 228405096 . C . PASS END=228405098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:45:38:0,45,675:0,114,255:16,0 chr1 228405099 . A . PASS END=228405104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:36:37:0,36,540:0,111,255:13,0 chr1 228405105 . G . PASS END=228405105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:24:37:0,24,360:0,111,255:8,0 chr1 228405106 . A . PASS END=228405106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:18:37:0,18,270:0,111,255:6,0 chr1 228407025 . A . PASS END=228407025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 228407026 . G . PASS END=228407029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228407030 . A . PASS END=228407030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 228407031 . A . PASS END=228407047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 228407048 . G . PASS END=228407057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228407058 . C . PASS END=228407058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 228407059 . G . PASS END=228407061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 228407062 . C . PASS END=228407062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 228407063 . A . PASS END=228407073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 228407074 . G . PASS END=228407092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:26,0 chr1 228407093 . G . PASS END=228407099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr1 228407100 . T . PASS END=228407102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 228407103 . G . PASS END=228407113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1088:0,90,255:30,0 chr1 228407114 . G . PASS END=228407114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 228407115 . C . PASS END=228407116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 228407117 . C . PASS END=228407117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 228407118 . A . PASS END=228407122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 228407123 . C . PASS END=228407123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 228407124 . A . PASS END=228407130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 228407131 . G . PASS END=228407131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 228407132 . G . PASS END=228407132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 228407133 . T . PASS END=228407133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 228407134 . G . PASS END=228407199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,988:0,81,255:33,0 chr1 228407200 . T . PASS END=228407200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 228407201 . A . PASS END=228407210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 228407211 . T . PASS END=228407211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr1 228407212 . G . PASS END=228407212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228407213 . G . PASS END=228407222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1108:0,74,255:27,0 chr1 228407223 . A . PASS END=228407243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr1 228407244 . G . PASS END=228407259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:17:0,42,630:0,51,255:19,0 chr1 228407260 . G A, 49.33 PASS DP=16;MQ=250.00;MQRankSum=3.281;ReadPosRankSum=2.646;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,7,0:0.438,0.000:16:6,1,0:3,6,0:48:84,0,50,222,322,543:201,0,255:8,0:4.9331e+01,7.2481e-05,5.3000e+01,2.2153e+02,3.5660e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,2,5:7,2,6,1 chr1 228407261 . G . PASS END=228407262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228407263 . C . PASS END=228407274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 228407275 . G . PASS END=228407275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr1 228407276 . G . PASS END=228407284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 228407285 . C T, 50.00 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=2.424;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,7,0:0.538,0.000:13:1,5,0:5,2,0:48:85,0,50,242,215,457:224,0,193:4,0:5.0000e+01,6.6010e-05,5.2832e+01,2.4234e+02,2.4932e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,2,5:5,1,4,3 chr1 228407286 . G . PASS END=228407300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 228412160 . A . PASS END=228412165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr1 228412166 . A . PASS END=228412184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:22,0 chr1 228412185 . G . PASS END=228412225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,62,255:24,0 chr1 228412226 . G . PASS END=228412226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 228412227 . T C, 530.03 PASS DP=33;MQ=237.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,17,0:0,16,0:450:568,483,0,668,668,668:255,99,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,21,12:0,0,13,20 chr1 228412228 . G A, 50.00 PASS DP=33;MQ=237.00;MQRankSum=-0.524;ReadPosRankSum=1.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,18,0:0.545,0.000:33:8,9,0:7,9,0:47:85,0,47,185,185,185:255,0,255:14,0:5.0000e+01,9.1896e-05,4.9526e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,5,11,7:5,10,8,10 chr1 228412229 . C . PASS END=228412307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:33:0,89,1270:0,89,255:40,0 chr1 228412308 . G A, 148.87 PASS DP=34;MQ=235.56;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:99:187,102,0,1265,102,1265:255,102,0:0,0:1.4887e+02,9.8867e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,16:0,0,13,21 chr1 228412309 . A . PASS END=228412332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:31,0 chr1 228412333 . T . PASS END=228412334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 228412335 . C . PASS END=228412335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:24,0 chr1 228412336 . A . PASS END=228412345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,74,255:26,0 chr1 228412346 . T . PASS END=228412355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr1 228412356 . G . PASS END=228412359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 228412360 . G . PASS END=228412360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228412361 . C . PASS END=228412362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228412363 . G . PASS END=228412364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228412365 . C . PASS END=228412383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:18,0 chr1 228412384 . T . PASS END=228412384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:14,0 chr1 228412385 . A . PASS END=228412397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 228412398 . T . PASS END=228412401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228412402 . G . PASS END=228412402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:13,0 chr1 228412403 . G . LowGQ END=228412404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:16:0,0,520:0,0,255:13,0 chr1 228412405 . C . PASS END=228412405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228412406 . A . PASS END=228412408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr1 228412409 . G . PASS END=228412409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:12,0 chr1 228412410 . G . PASS END=228412410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:12,0 chr1 228412411 . C . PASS END=228412411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 228412412 . T . LowGQ END=228412412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,380:13,0,255:10,0 chr1 228412413 . C . PASS END=228412417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 228412418 . T . PASS END=228412418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:12,0 chr1 228412419 . C . PASS END=228412419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 228412420 . C . PASS END=228412420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr1 228412421 . A . PASS END=228412421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 228412422 . T . PASS END=228412422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr1 228412423 . C . PASS END=228412431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 228412432 . A . PASS END=228412432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 228412433 . A . PASS END=228412435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 228430884 . A . PASS END=228430889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,442:0,39,255:13,0 chr1 228430890 . A . PASS END=228430917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:18,0 chr1 228430918 . A . PASS END=228430918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 228430919 . C . PASS END=228430927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 228430928 . G . PASS END=228430928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228430929 . T . PASS END=228430929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228430930 . G . PASS END=228430938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228430939 . G . PASS END=228430939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr1 228430940 . G . PASS END=228430950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,762:0,63,255:23,0 chr1 228430951 . T . PASS END=228430951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 228430952 . G . PASS END=228430956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 228430957 . G . PASS END=228430957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 228430958 . C . PASS END=228430967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,860:0,69,255:25,0 chr1 228430968 . A . PASS END=228430968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 228430969 . G . PASS END=228430990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:25,0 chr1 228430991 . G . PASS END=228430991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 228430992 . T . PASS END=228431003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,878:0,75,255:25,0 chr1 228431004 . A . PASS END=228431004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr1 228431005 . A . PASS END=228431020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,893:0,69,255:25,0 chr1 228431021 . A . PASS END=228431035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 228431036 . G . PASS END=228431056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr1 228431057 . T . PASS END=228431057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228431058 . G . PASS END=228431094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,682:0,44,255:19,0 chr1 228431095 . A G, 103.72 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,9,0:0,10,0:54:141,57,0,704,57,704:255,57,0:0,0:1.0372e+02,5.3722e+01,1.8379e-05,4.5000e+02,8.8492e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,13:0,0,10,9 chr1 228431096 . G . PASS END=228431102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 228431103 . G . PASS END=228431103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228431104 . G . PASS END=228431107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 228431108 . T . PASS END=228431108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 228431109 . A . PASS END=228431121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr1 228431122 . C . PASS END=228431132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 228431133 . G . PASS END=228431155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,449:0,36,255:13,0 chr1 228431156 . A . PASS END=228431156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 228431157 . C . PASS END=228431159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 228431997 . A . PASS END=228431998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,721:0,57,255:19,0 chr1 228431999 . C . PASS END=228432000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228432001 . C . PASS END=228432001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 228432002 . A . PASS END=228432016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 228432017 . A . PASS END=228432023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 228432024 . A . PASS END=228432057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:24,0 chr1 228432058 . G . PASS END=228432059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 228432060 . C . PASS END=228432062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228432063 . G . PASS END=228432087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 228432088 . C . PASS END=228432090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228432091 . G . PASS END=228432109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 228432110 . T . PASS END=228432111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228432112 . G . PASS END=228432114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 228432115 . C . PASS END=228432129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,80,255:26,0 chr1 228432130 . G . PASS END=228432132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 228432133 . G . PASS END=228432154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:26,0 chr1 228432155 . A . PASS END=228432155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 228432156 . T . PASS END=228432213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:26,0 chr1 228432214 . T . PASS END=228432214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr1 228432215 . G . PASS END=228432228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr1 228432229 . T . PASS END=228432232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228432233 . G . PASS END=228432234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr1 228432235 . T . PASS END=228432258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 228432259 . C . PASS END=228432259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228432260 . C . PASS END=228432262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228432263 . C . PASS END=228432267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228432268 . C . PASS END=228432272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 228433114 . A . PASS END=228433135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:19,0 chr1 228433136 . G . PASS END=228433158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 228433159 . T . PASS END=228433159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 228433160 . G . PASS END=228433174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:26,0 chr1 228433175 . G . PASS END=228433178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228433179 . A . PASS END=228433179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 228433180 . C . PASS END=228433181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228433182 . G . PASS END=228433182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:27,0 chr1 228433183 . C . PASS END=228433206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:30,0 chr1 228433207 . A . PASS END=228433207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 228433208 . G . PASS END=228433216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr1 228433217 . A G, 146.32 PASS DP=33;MQ=204.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,18,0:0,15,0:96:184,99,0,1280,99,1280:255,99,0:0,0:1.4632e+02,9.6321e+01,0.0000e+00,4.5000e+02,1.3109e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,14:0,0,14,19 chr1 228433218 . G . PASS END=228433254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1270:0,89,255:35,0 chr1 228433255 . C . PASS END=228433308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1036:0,80,255:34,0 chr1 228433309 . A . PASS END=228433323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 228433324 . C . PASS END=228433324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 228433325 . A . PASS END=228433328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 228433329 . G . PASS END=228433345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 228433346 . C T, 50.00 PASS DP=24;MQ=234.71;MQRankSum=-3.256;ReadPosRankSum=3.380;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:3,6,0:7,7,0:48:85,0,49,465,358,823:255,0,255:9,0:5.0000e+01,6.9893e-05,5.2145e+01,4.5000e+02,3.9247e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,7,6:6,4,8,5 chr1 228433347 . G . PASS END=228433365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,703:0,66,255:22,0 chr1 228433366 . T . PASS END=228433369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,662:0,49,255:19,0 chr1 228433370 . C . PASS END=228433374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 228433375 . A . PASS END=228433376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228433377 . C . PASS END=228433381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228433382 . C . PASS END=228433383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228433384 . T . PASS END=228433389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 228434229 . A . PASS END=228434251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,551:0,41,255:19,0 chr1 228434252 . G . PASS END=228434257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 228434258 . T . PASS END=228434258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr1 228434259 . T . PASS END=228434269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 228434270 . G . PASS END=228434294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr1 228434295 . G . PASS END=228434301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228434302 . A . PASS END=228434302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 228434303 . C . PASS END=228434316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,825:0,66,255:24,0 chr1 228434317 . G . PASS END=228434317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 228434318 . G . PASS END=228434345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,892:0,66,255:24,0 chr1 228434346 . A . PASS END=228434346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 228434347 . C . PASS END=228434357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 228434358 . A . PASS END=228434373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,779:0,69,255:24,0 chr1 228434374 . T . PASS END=228434375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,770:0,41,255:22,0 chr1 228434376 . C . PASS END=228434386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 228434387 . A . PASS END=228434387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 228434388 . T . PASS END=228434394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 228434395 . T C, 112.76 PASS DP=22;MQ=243.58;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,12,0:0,10,0:63:151,66,0,806,66,806:255,66,0:0,0:1.1276e+02,6.2756e+01,2.3297e-06,4.5000e+02,9.7526e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,13:0,0,11,11 chr1 228434396 . G . PASS END=228434396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228434397 . C . PASS END=228434397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 228434398 . G . PASS END=228434401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228434402 . T . PASS END=228434413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 228434414 . C . PASS END=228434417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228434418 . T . PASS END=228434433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 228434434 . C . PASS END=228434444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:16:0,36,540:0,48,255:13,0 chr1 228434445 . C . PASS END=228434445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 228434446 . T . PASS END=228434447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228434448 . G . PASS END=228434466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 228434467 . T C, 89.13 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,9,0:0,5,0:39:127,42,0,527,42,527:255,42,0:0,0:8.9131e+01,3.9131e+01,5.3069e-04,4.5000e+02,7.3901e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,10:0,0,5,9 chr1 228434468 . G . PASS END=228434480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:12,0 chr1 228434481 . T . PASS END=228434481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,283:0,19,255:11,0 chr1 228434482 . C . PASS END=228434498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,368:0,36,255:12,0 chr1 228434499 . T . PASS END=228434499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 228434500 . T . PASS END=228434502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr1 228434503 . A . PASS END=228434503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 228434504 . G . PASS END=228434504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 228437666 . A . PASS END=228437677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:18,0 chr1 228437678 . T . PASS END=228437678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,563:0,21,255:16,0 chr1 228437679 . G . PASS END=228437701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 228437702 . A . PASS END=228437702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 228437703 . C . PASS END=228437705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr1 228437706 . G . PASS END=228437731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:24,0 chr1 228437732 . T . PASS END=228437734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228437735 . C . PASS END=228437771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1231:0,86,255:38,0 chr1 228437772 . G A, 47.39 PASS DP=39;MQ=187.98;MQRankSum=0.785;ReadPosRankSum=2.327;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,16,0:0.410,0.000:39:10,8,0:13,8,0:46:82,0,50,568,794,1362:255,0,255:23,0:4.7391e+01,1.0096e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,14,11,5:16,7,7,9 chr1 228437773 . G . PASS END=228437809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:35:0,96,1333:0,98,255:36,0 chr1 228437810 . G . PASS END=228437844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1221:0,90,255:36,0 chr1 228437845 . C . PASS END=228437850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 228437851 . C . PASS END=228437861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228437862 . G . PASS END=228437864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228437865 . G . PASS END=228437865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 228437866 . G . PASS END=228437870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228437871 . C . PASS END=228437878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228437879 . A . PASS END=228437879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228437880 . C . PASS END=228437890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:26,0 chr1 228437891 . A . PASS END=228437927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 228437928 . C . PASS END=228437941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr1 228444352 . A . PASS END=228444352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 228444353 . G . PASS END=228444355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 228444356 . C . PASS END=228444363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 228444364 . T . PASS END=228444366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228444367 . T . PASS END=228444383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 228444384 . G . PASS END=228444385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228444386 . G . PASS END=228444386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 228444387 . C . PASS END=228444395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 228444396 . G . PASS END=228444417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:12,0 chr1 228444418 . G . PASS END=228444447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,574:0,45,255:19,0 chr1 228444448 . C . PASS END=228444463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:23,0 chr1 228444464 . G . PASS END=228444464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 228444465 . T . PASS END=228444465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 228444466 . G . PASS END=228444466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 228444467 . G . PASS END=228444501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,785:0,72,255:25,0 chr1 228444502 . A . PASS END=228444502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,747:0,58,255:22,0 chr1 228444503 . A . PASS END=228444508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,914:0,72,255:24,0 chr1 228444509 . C . PASS END=228444509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 228444510 . A . PASS END=228444527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 228444528 . A . PASS END=228444533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 228444534 . A . PASS END=228444534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr1 228444535 . G . PASS END=228444555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 228444556 . G . PASS END=228444563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:19,0 chr1 228444564 . G . PASS END=228444564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 228444565 . T A, 125.25 PASS DP=26;MQ=215.13;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,13,0:0,13,0:75:163,78,0,992,78,992:255,78,0:0,0:1.2525e+02,7.5247e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,16:0,0,9,17 chr1 228444566 . C . PASS END=228444566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 228444567 . G . PASS END=228444567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 228444568 . C . PASS END=228444571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228444572 . G . PASS END=228444602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:16,0 chr1 228444603 . C . PASS END=228444603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 228444604 . T . PASS END=228444604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228444605 . C . PASS END=228444609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 228444610 . T . PASS END=228444627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 228447202 . A . PASS END=228447221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,474:0,42,255:17,0 chr1 228447222 . A . PASS END=228447222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 228447223 . A . PASS END=228447262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:18,0 chr1 228447263 . G . PASS END=228447267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr1 228447268 . G . PASS END=228447304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1070:0,84,255:34,0 chr1 228447305 . A . PASS END=228447307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1152:0,66,255:33,0 chr1 228447308 . G . PASS END=228447392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1217:0,86,255:36,0 chr1 228447393 . G . PASS END=228447415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 228447416 . C . PASS END=228447417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228447418 . C . PASS END=228447418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228447419 . C . PASS END=228447421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 228447422 . A . PASS END=228447424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:33:22:0,33,495:0,66,255:12,0 chr1 228447425 . G . PASS END=228447430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr1 228447431 . C . PASS END=228447431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr1 228447432 . T . PASS END=228447433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:14,0 chr1 228447434 . T . PASS END=228447472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 228447473 . G . PASS END=228447477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 228451817 . A . PASS END=228451821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,651:0,48,255:17,0 chr1 228451822 . A . PASS END=228451822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 228451823 . A . PASS END=228451823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr1 228451824 . G . PASS END=228451824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 228451825 . G . PASS END=228451825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 228451826 . C T, 50.00 PASS DP=17;MQ=215.96;MQRankSum=-0.653;ReadPosRankSum=2.663;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,11,0:0.647,0.000:17:1,5,0:5,6,0:40:85,0,38,393,207,600:255,0,173:6,0:5.0000e+01,4.0513e-04,4.0793e+01,3.9342e+02,2.4140e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,0,7,4:1,5,5,6 chr1 228451827 . G . PASS END=228451830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:18,0 chr1 228451831 . T . PASS END=228451831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 228451832 . T . PASS END=228451847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,623:0,57,255:19,0 chr1 228451848 . A . PASS END=228451858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr1 228451859 . A . PASS END=228451859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 228451860 . G . PASS END=228451863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 228451864 . C . PASS END=228451871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,906:0,72,255:26,0 chr1 228451872 . G . PASS END=228451989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1017:0,84,255:36,0 chr1 228451990 . T . PASS END=228451994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 228451995 . A . PASS END=228452017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,961:0,75,255:26,0 chr1 228452018 . C . PASS END=228452018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 228452019 . A . PASS END=228452031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 228452032 . G A, 50.00 PASS DP=25;MQ=208.03;MQRankSum=-0.693;ReadPosRankSum=0.860;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,15,0:0.600,0.000:25:4,6,0:6,9,0:47:85,0,48,500,358,857:255,0,255:10,0:5.0000e+01,7.8176e-05,5.0963e+01,4.5000e+02,3.9247e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,2,13:4,6,9,6 chr1 228452033 . C . PASS END=228452040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 228452041 . T . PASS END=228452041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 228452042 . A . PASS END=228452050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 228452051 . A . PASS END=228452068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 228452069 . T . PASS END=228452069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:15,0 chr1 228452070 . G . PASS END=228452074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 228452075 . T . PASS END=228452076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228452077 . C . PASS END=228452083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228452084 . A . PASS END=228452092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 228456231 . A . PASS END=228456260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,697:0,63,255:25,0 chr1 228456261 . C . PASS END=228456261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 228456262 . A . PASS END=228456271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,955:0,75,255:26,0 chr1 228456272 . G . PASS END=228456272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228456273 . A . PASS END=228456273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:25,0 chr1 228456274 . G . PASS END=228456278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 228456279 . A . PASS END=228456279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 228456280 . G . PASS END=228456281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 228456282 . C . PASS END=228456282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 228456283 . T . PASS END=228456284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 228456285 . A . PASS END=228456285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 228456286 . G . PASS END=228456287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228456288 . C . PASS END=228456288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 228456289 . G . PASS END=228456293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 228456294 . C . PASS END=228456294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 228456295 . C . PASS END=228456463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1180:0,83,255:40,0 chr1 228456464 . G . PASS END=228456464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 228456465 . A . PASS END=228456468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228456469 . A . PASS END=228456482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,914:0,72,255:24,0 chr1 228456483 . T . PASS END=228456483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:23,0 chr1 228456484 . C . PASS END=228456484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 228456485 . T . PASS END=228456485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 228456486 . C . PASS END=228456503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,870:0,72,255:24,0 chr1 228456504 . C . PASS END=228456504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr1 228456505 . A . PASS END=228456506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228459626 . A . PASS END=228459626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 228459627 . G . PASS END=228459636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228459637 . G . PASS END=228459637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 228459638 . T . PASS END=228459649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 228459650 . A . PASS END=228459651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228459652 . C . PASS END=228459652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 228459653 . A . PASS END=228459668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,443:0,39,255:13,0 chr1 228459669 . G . PASS END=228459669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 228459670 . G . PASS END=228459690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:19,0 chr1 228459691 . G . PASS END=228459691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 228459692 . T . PASS END=228459705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 228459706 . G . PASS END=228459720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 228459721 . C . PASS END=228459721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr1 228459722 . T . PASS END=228459722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228459723 . G . PASS END=228459723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 228459724 . A . PASS END=228459757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,922:0,62,255:26,0 chr1 228459758 . T . PASS END=228459760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:26,0 chr1 228459761 . G . PASS END=228459764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228459765 . C . PASS END=228459772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 228459773 . G . PASS END=228459773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr1 228459774 . G . PASS END=228459774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228459775 . A . PASS END=228459775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228459776 . A . PASS END=228459776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 228459777 . G . PASS END=228459796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1005:0,87,255:29,0 chr1 228459797 . A . PASS END=228459797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,927:0,70,255:28,0 chr1 228459798 . A . PASS END=228459799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228459800 . T . PASS END=228459801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 228459802 . C . PASS END=228459802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 228459803 . G . PASS END=228459803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 228459804 . T . PASS END=228459808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 228459809 . A . PASS END=228459809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 228459810 . G . PASS END=228459814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:31,0 chr1 228459815 . T . PASS END=228459815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1194:0,71,255:28,0 chr1 228459816 . G . PASS END=228459832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1224:0,83,255:30,0 chr1 228459833 . T . PASS END=228459834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228459835 . G . PASS END=228459848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:30,0 chr1 228459849 . A . PASS END=228459849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,978:0,35,255:25,0 chr1 228459850 . G . PASS END=228459866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 228459867 . G . PASS END=228459898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,931:0,68,255:25,0 chr1 228459899 . T . PASS END=228459899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr1 228459900 . C . PASS END=228459905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 228459906 . C . PASS END=228459906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 228459907 . C . PASS END=228459922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:22,0 chr1 228460973 . A . PASS END=228460993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:20,0 chr1 228460994 . A . PASS END=228460995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228460996 . G . PASS END=228461034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,837:0,63,255:26,0 chr1 228461035 . G . PASS END=228461035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228461036 . C . PASS END=228461038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr1 228461039 . G . PASS END=228461042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 228461043 . C . PASS END=228461043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 228461044 . A . PASS END=228461047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 228461048 . T . PASS END=228461048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 228461049 . G . PASS END=228461085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr1 228461086 . T . PASS END=228461087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 228461088 . G . PASS END=228461090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:29,0 chr1 228461091 . C . PASS END=228461091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr1 228461092 . A . PASS END=228461100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:29:0,72,1080:0,86,255:26,0 chr1 228461101 . A . PASS END=228461107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228461108 . T . PASS END=228461108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 228461109 . G . PASS END=228461124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 228461125 . G . PASS END=228461128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr1 228461129 . A G, 131.27 PASS DP=28;MQ=228.77;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,17,0:0,11,0:81:169,84,0,1074,84,1074:255,84,0:0,0:1.3127e+02,8.1268e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,15:0,0,12,16 chr1 228461130 . C . PASS END=228461158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 228461159 . T . PASS END=228461159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 228461160 . G . PASS END=228461163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr1 228461164 . G . PASS END=228461166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:18,0 chr1 228461167 . C . PASS END=228461177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 228461178 . C . PASS END=228461185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 228461186 . A . PASS END=228461186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr1 228461187 . T . PASS END=228461189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 228461190 . T . PASS END=228461196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 228461197 . T . PASS END=228461223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,449:0,36,255:12,0 chr1 228461224 . C . PASS END=228461248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 228461471 . A . PASS END=228461473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228461474 . T . PASS END=228461474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 228461475 . G . PASS END=228461493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 228461494 . A . PASS END=228461494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 228461495 . G . PASS END=228461524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,438:0,45,255:18,0 chr1 228461525 . A . PASS END=228461525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 228461526 . G . PASS END=228461546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:19,0 chr1 228461547 . G . PASS END=228461547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 228461548 . A . PASS END=228461548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:17,0 chr1 228461549 . C . PASS END=228461557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 228461558 . T . PASS END=228461558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228461559 . G . PASS END=228461631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:25,0 chr1 228461632 . A . PASS END=228461632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:22,0 chr1 228461633 . C . PASS END=228461646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,884:0,69,255:23,0 chr1 228461647 . G . PASS END=228461681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,627:0,51,255:17,0 chr1 228461682 . T . PASS END=228461682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 228461683 . C . PASS END=228461690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 228461691 . C . PASS END=228461723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,32,255:13,0 chr1 228461724 . G . PASS END=228461737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 228461738 . T . PASS END=228461749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 228461879 . A . PASS END=228461886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 228461887 . G . PASS END=228461887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 228461888 . C . PASS END=228461917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 228461918 . G . PASS END=228461984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,775:0,60,255:26,0 chr1 228461985 . G . PASS END=228461985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:23,0 chr1 228461986 . C . PASS END=228462000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,951:0,65,255:26,0 chr1 228462001 . C . PASS END=228462004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 228462005 . T . PASS END=228462037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,939:0,75,255:26,0 chr1 228462038 . A . PASS END=228462038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 228462039 . G . PASS END=228462103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,878:0,62,255:26,0 chr1 228462104 . A . PASS END=228462124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 228462125 . G . PASS END=228462125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr1 228462126 . T . PASS END=228462134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr1 228462135 . C . PASS END=228462135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:15,0 chr1 228462136 . A . PASS END=228462145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,665:0,41,255:16,0 chr1 228462273 . T . PASS END=228462276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228462277 . C . PASS END=228462277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 228462278 . C . PASS END=228462295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,615:0,41,255:18,0 chr1 228462296 . T . PASS END=228462296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 228462297 . C . PASS END=228462300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,643:0,41,255:19,0 chr1 228462301 . G . PASS END=228462307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 228462308 . A . PASS END=228462314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228462315 . T . PASS END=228462332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 228462333 . A . PASS END=228462333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 228462334 . G . PASS END=228462340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:25,0 chr1 228462341 . T . PASS END=228462341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 228462342 . T . PASS END=228462343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 228462344 . C . PASS END=228462344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 228462345 . A . PASS END=228462351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:27,0 chr1 228462352 . G . PASS END=228462359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 228462360 . C . PASS END=228462360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 228462361 . C . PASS END=228462372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1086:0,87,255:29,0 chr1 228462373 . A . PASS END=228462373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 228462374 . G . PASS END=228462377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 228462378 . T . PASS END=228462378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 228462379 . G . PASS END=228462386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1066:0,87,255:30,0 chr1 228462387 . G . PASS END=228462387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 228462388 . G . PASS END=228462395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 228462396 . C . PASS END=228462426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,878:0,72,255:26,0 chr1 228462427 . A . PASS END=228462427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:22,0 chr1 228462428 . T . PASS END=228462433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr1 228462434 . A . PASS END=228462434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 228462435 . G . PASS END=228462438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 228462439 . C . PASS END=228462484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:19,0 chr1 228462485 . G . PASS END=228462487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 228462488 . C . PASS END=228462488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 228462489 . A . PASS END=228462495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 228462496 . C . PASS END=228462497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228462498 . T . PASS END=228462540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 228462541 . A . PASS END=228462542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 228463461 . A . PASS END=228463475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 228463476 . T . PASS END=228463476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 228463477 . C . PASS END=228463484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr1 228463485 . A . PASS END=228463509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:12,0 chr1 228463510 . G . PASS END=228463510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 228463511 . C . PASS END=228463516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 228463517 . T . PASS END=228463520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228463521 . T . PASS END=228463521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 228463522 . G . PASS END=228463532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 228463533 . T . PASS END=228463534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228463535 . G . PASS END=228463536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228463537 . G . PASS END=228463560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:13,0 chr1 228463561 . G . PASS END=228463634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,592:0,41,255:19,0 chr1 228463635 . G . PASS END=228463637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 228463638 . T . PASS END=228463639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228463640 . G . PASS END=228463648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 228463649 . A . PASS END=228463695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,673:0,41,255:19,0 chr1 228463696 . T . PASS END=228463696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:14,0 chr1 228463697 . G . PASS END=228463701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 228463702 . G . PASS END=228463727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,35,255:13,0 chr1 228464151 . T . PASS END=228464151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 228464152 . G . PASS END=228464185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 228464186 . G . PASS END=228464210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:11,0 chr1 228464211 . C . PASS END=228464242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,388:0,33,255:12,0 chr1 228464243 . G . PASS END=228464247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 228464248 . T G, 88.68 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,8,0:0,6,0:39:126,42,0,514,42,514:255,42,0:0,0:8.8676e+01,3.8676e+01,5.8946e-04,4.5000e+02,7.3446e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,5:0,0,9,5 chr1 228464249 . G . PASS END=228464258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228464259 . C . PASS END=228464270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 228464271 . T . PASS END=228464275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228464276 . T C, 89.14 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,9,0:0,5,0:39:127,42,0,543,42,543:255,42,0:0,0:8.9137e+01,3.9137e+01,5.2992e-04,4.5000e+02,7.3907e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,6:0,0,9,5 chr1 228464277 . T . PASS END=228464295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 228464296 . C . PASS END=228464303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 228464304 . C . PASS END=228464304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 228464305 . T . PASS END=228464308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228464309 . C . PASS END=228464309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr1 228464310 . G . PASS END=228464313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 228464314 . C . PASS END=228464320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 228464321 . C . PASS END=228464321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 228464322 . A . PASS END=228464322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228464323 . C . PASS END=228464323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr1 228464324 . A . PASS END=228464326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228464327 . C . PASS END=228464327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr1 228464328 . T . PASS END=228464344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr1 228464345 . C . PASS END=228464345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 228464346 . G . PASS END=228464351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228464352 . A . PASS END=228464352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228464353 . G . PASS END=228464357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228464358 . G . PASS END=228464378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228464379 . C . PASS END=228464381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 228464382 . A . PASS END=228464388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228464389 . G . PASS END=228464394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 228464395 . G . PASS END=228464400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228464401 . G . PASS END=228464401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 228464402 . C . PASS END=228464411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228464412 . T . PASS END=228464416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228464417 . G . PASS END=228464417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 228464631 . A . PASS END=228464709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1168:0,89,255:37,0 chr1 228464710 . G . PASS END=228464710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr1 228464711 . T . PASS END=228464712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:32,0 chr1 228464713 . G . PASS END=228464713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:29,0 chr1 228464714 . C . PASS END=228464743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1166:0,83,255:32,0 chr1 228464861 . G . PASS END=228464861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 228464862 . A . PASS END=228464864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:72:32:0,72,1080:0,82,255:25,0 chr1 228464865 . G . PASS END=228464879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:33:0,82,1249:0,82,255:33,0 chr1 228464880 . C . PASS END=228464970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:33:0,91,1160:0,91,255:40,0 chr1 228464971 . T . PASS END=228464971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1173:0,56,255:31,0 chr1 228464972 . G . PASS END=228465003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1154:0,83,255:34,0 chr1 228465004 . G . PASS END=228465010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,82,255:26,0 chr1 228465011 . C . PASS END=228465014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228465206 . G . PASS END=228465308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,101,1449:0,101,255:40,0 chr1 228465309 . G . PASS END=228465345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,114,1710:0,128,255:40,0 chr1 228465346 . A G, 49.97 PASS DP=45;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=3.077;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:10,14,0:13,8,0:48:85,0,50,777,785,1562:255,0,255:20,0:4.9974e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,6,16:11,12,8,14 chr1 228465347 . A . PASS END=228465367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,102,1520:0,110,255:37,0 chr1 228465455 . G . PASS END=228465559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,105,1612:0,105,255:40,0 chr1 228466390 . A . PASS END=228466407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,529:0,40,255:19,0 chr1 228466408 . T . PASS END=228466419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228466420 . G . PASS END=228466420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228466421 . G . PASS END=228466426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228466427 . G . PASS END=228466427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 228466428 . A . PASS END=228466429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228466430 . T . PASS END=228466430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 228466431 . G . PASS END=228466433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 228466434 . A . PASS END=228466434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 228466435 . T . PASS END=228466441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,815:0,69,255:23,0 chr1 228466442 . G . PASS END=228466442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr1 228466443 . C . PASS END=228466447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 228466448 . C . PASS END=228466448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 228466449 . G . PASS END=228466484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,74,255:26,0 chr1 228466485 . C . PASS END=228466485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228466486 . A . PASS END=228466492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228466493 . G . PASS END=228466493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228466494 . T . PASS END=228466519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,947:0,78,255:26,0 chr1 228466520 . G . PASS END=228466527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 228466528 . C . PASS END=228466532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 228466533 . T . PASS END=228466536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228466537 . A . PASS END=228466551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 228466552 . G . PASS END=228466554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 228466555 . T . PASS END=228466555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 228466556 . C . PASS END=228466559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 228466560 . C . PASS END=228466604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,61,255:26,0 chr1 228466605 . T . PASS END=228466605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,880:0,42,255:25,0 chr1 228466606 . A . PASS END=228466621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 228466622 . T . PASS END=228466622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 228466623 . G . PASS END=228466624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 228466625 . T . PASS END=228466625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 228466626 . G . PASS END=228466629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 228466630 . A . PASS END=228466630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:21,0 chr1 228466631 . G . PASS END=228466637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 228466638 . G . PASS END=228466638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 228466639 . C . PASS END=228466639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228466640 . A . PASS END=228466640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 228466641 . C . PASS END=228466644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 228466645 . T . PASS END=228466645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr1 228466646 . C . PASS END=228466656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 228466876 . A . PASS END=228466881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228466882 . C . PASS END=228466882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228466883 . C . PASS END=228466883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 228466884 . A . PASS END=228466906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr1 228466907 . G . PASS END=228466914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 228466915 . C . PASS END=228466998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,487:0,44,255:19,0 chr1 228466999 . C . PASS END=228467000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 228467001 . G . PASS END=228467002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228467003 . G . PASS END=228467018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 228467019 . A . PASS END=228467019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 228467020 . A . PASS END=228467078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:25,0 chr1 228467079 . A . PASS END=228467082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 228467083 . T . PASS END=228467083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,919:0,53,255:26,0 chr1 228467084 . G . PASS END=228467087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228467088 . G . PASS END=228467088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 228467089 . G . PASS END=228467090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228467091 . C . PASS END=228467093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr1 228467094 . G . PASS END=228467096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228467097 . C . PASS END=228467112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,893:0,64,255:25,0 chr1 228467113 . A . PASS END=228467113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 228467114 . G . PASS END=228467120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,886:0,61,255:24,0 chr1 228467121 . T . PASS END=228467121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 228467122 . C . PASS END=228467125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr1 228467126 . T . PASS END=228467126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 228467127 . G . PASS END=228467131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr1 228467132 . C . PASS END=228467132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 228467133 . C . PASS END=228467141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,939:0,75,255:25,0 chr1 228467142 . T . PASS END=228467142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr1 228467143 . C . PASS END=228467145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 228467522 . A . PASS END=228467541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 228467542 . C . PASS END=228467579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,460:0,42,255:16,0 chr1 228467580 . A . PASS END=228467580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:15,0 chr1 228467581 . G . PASS END=228467592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:16,0 chr1 228467593 . T . PASS END=228467593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,0 chr1 228467594 . G . PASS END=228467604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 228467605 . C . PASS END=228467605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:16,0 chr1 228467606 . C . PASS END=228467619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,615:0,51,255:19,0 chr1 228467620 . G . PASS END=228467620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228467621 . T . PASS END=228467621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 228467622 . G . PASS END=228467622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228467623 . C . PASS END=228467623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:18,0 chr1 228467624 . A . PASS END=228467644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,619:0,40,255:19,0 chr1 228467645 . C . PASS END=228467646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 228467647 . C . PASS END=228467647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr1 228467648 . T . PASS END=228467648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 228467649 . G . PASS END=228467654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr1 228467655 . C . PASS END=228467655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 228467656 . T . PASS END=228467656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 228467657 . C . PASS END=228467657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 228467658 . T . PASS END=228467666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,799:0,66,255:22,0 chr1 228467667 . T . PASS END=228467667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 228467668 . A . PASS END=228467673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:21,0 chr1 228467674 . A . PASS END=228467677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 228467678 . T . PASS END=228467704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:18:0,46,670:0,46,255:20,0 chr1 228467705 . T . PASS END=228467706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 228467707 . C . PASS END=228467710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr1 228467711 . G A, 50.00 PASS DP=20;MQ=250.00;MQRankSum=2.646;ReadPosRankSum=1.799;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,17,0:0.850,0.000:20:2,12,0:1,5,0:30:85,0,27,579,107,687:255,0,56:3,0:5.0005e+01,4.5005e-03,2.9890e+01,4.5000e+02,1.4208e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,1,10,7:1,2,11,6 chr1 228467712 . G . PASS END=228467725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:17,0 chr1 228467726 . A . PASS END=228467726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 228467727 . T . PASS END=228467728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228467729 . C . PASS END=228467729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 228467730 . T . PASS END=228467734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 228467735 . T . PASS END=228467735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 228467736 . C . PASS END=228467741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 228467742 . G . PASS END=228467742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 228467743 . T . PASS END=228467747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 228467748 . G . PASS END=228467748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228467749 . G . PASS END=228467759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr1 228467760 . C . PASS END=228467760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 228467761 . C . PASS END=228467773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 228467774 . A . PASS END=228467774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 228467775 . G . PASS END=228467779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr1 228467780 . C . PASS END=228467781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr1 228467782 . G . PASS END=228467788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 228467880 . C . PASS END=228467882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228467883 . G . PASS END=228467889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr1 228467890 . G . PASS END=228467890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228467891 . A . PASS END=228467891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 228467892 . C . PASS END=228467924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr1 228467925 . C . PASS END=228467926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1014:0,68,255:26,0 chr1 228467927 . G . PASS END=228467972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1132:0,84,255:33,0 chr1 228467973 . A . PASS END=228467974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr1 228467975 . G . PASS END=228467981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228467982 . A . PASS END=228467982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 228467983 . G . PASS END=228467986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 228467987 . T . PASS END=228467997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 228467998 . G . PASS END=228467999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228468000 . T . PASS END=228468002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:77:29:0,77,1086:0,77,255:27,0 chr1 228468003 . C . PASS END=228468005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 228468006 . T . PASS END=228468081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,861:0,62,255:26,0 chr1 228468082 . T . PASS END=228468082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 228468083 . G . PASS END=228468099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 228468100 . C . PASS END=228468101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 228468102 . C . PASS END=228468116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 228468117 . T . PASS END=228468117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:19,0 chr1 228468118 . G . PASS END=228468131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 228468132 . G . PASS END=228468132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 228468133 . C . PASS END=228468134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228468135 . T . PASS END=228468135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 228468136 . G . PASS END=228468144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 228468145 . A . PASS END=228468146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr1 228468231 . T . PASS END=228468231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 228468232 . G . PASS END=228468243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:19,0 chr1 228468244 . G A, 49.89 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=2.409;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:5,2,0:5,7,0:48:85,0,50,314,358,671:255,0,255:10,0:4.9886e+01,6.6269e-05,5.3000e+01,3.1379e+02,3.9240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,6,3:6,4,3,6 chr1 228468245 . T . PASS END=228468265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 228468266 . C . PASS END=228468266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228468267 . T . PASS END=228468267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228468268 . G . PASS END=228468281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,852:0,69,255:23,0 chr1 228468282 . G . PASS END=228468290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr1 228468291 . T . PASS END=228468291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 228468292 . G . PASS END=228468301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:26,0 chr1 228468302 . T . PASS END=228468320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 228468321 . A . PASS END=228468339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1006:0,68,255:26,0 chr1 228468340 . C . PASS END=228468343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228468344 . G . PASS END=228468345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 228468346 . T . PASS END=228468353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:29,0 chr1 228468354 . A . PASS END=228468354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228468355 . G . PASS END=228468355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228468356 . C . PASS END=228468362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,1124:0,63,255:26,0 chr1 228468363 . C . PASS END=228468363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228468364 . C . PASS END=228468364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 228468365 . A . PASS END=228468366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228468367 . T . PASS END=228468368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 228468369 . A . PASS END=228468371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228468372 . A . PASS END=228468372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 228468373 . G . PASS END=228468375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228468376 . T . PASS END=228468376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 228468377 . G . PASS END=228468384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 228468385 . G . PASS END=228468385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 228468386 . C . PASS END=228468388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228468389 . A . PASS END=228468390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:27,0 chr1 228468391 . G . PASS END=228468397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228468398 . A . PASS END=228468398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228468399 . C . PASS END=228468406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 228468407 . C . PASS END=228468424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,947:0,75,255:26,0 chr1 228468425 . A . PASS END=228468425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 228468426 . G . PASS END=228468434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 228468435 . A . PASS END=228468435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 228468436 . C . PASS END=228468436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 228468437 . G . PASS END=228468451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:18:0,45,675:0,54,255:18,0 chr1 228468452 . T . PASS END=228468452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:13,0 chr1 228468453 . G . PASS END=228468458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:15,0 chr1 228468459 . T . PASS END=228468459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:13,0 chr1 228468460 . G . PASS END=228468465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228468466 . C . PASS END=228468466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 228468467 . G . PASS END=228468470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228468471 . A . PASS END=228468487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr1 228468488 . C . PASS END=228468488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 228468489 . G . PASS END=228468496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 228468497 . G . PASS END=228468497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr1 228469634 . A . PASS END=228469696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,882:0,62,255:26,0 chr1 228469697 . G . PASS END=228469698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228469699 . T . PASS END=228469699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 228469700 . T . PASS END=228469705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1080:0,84,255:30,0 chr1 228469706 . G . PASS END=228469709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 228469710 . C . PASS END=228469711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 228469712 . T . PASS END=228469737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,870:0,61,255:26,0 chr1 228469738 . G . PASS END=228469742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 228469743 . G . PASS END=228469744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 228469745 . G . PASS END=228469746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 228469747 . A . PASS END=228469791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr1 228469792 . A . PASS END=228469794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 228469795 . C . PASS END=228469799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr1 228469800 . G . PASS END=228469800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 228469801 . G . PASS END=228469804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:20,0 chr1 228469805 . G . PASS END=228469805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:17,0 chr1 228469806 . A . PASS END=228469825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:18:0,40,637:0,40,255:18,0 chr1 228469826 . G . PASS END=228469826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 228469827 . G . PASS END=228469832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 228469833 . T . PASS END=228469847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:18,0 chr1 228469848 . C . PASS END=228469848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 228469849 . G . PASS END=228469851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 228469852 . G . PASS END=228469869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 228469870 . C T, 50.00 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=1.200;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,7,0:0.538,0.000:13:3,4,0:3,3,0:48:85,0,50,240,207,446:246,0,183:6,0:5.0000e+01,6.6010e-05,5.2832e+01,2.3975e+02,2.4131e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,1,6:4,2,4,3 chr1 228469871 . G . PASS END=228469871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 228469872 . G . PASS END=228469872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 228469873 . G . PASS END=228469889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr1 228469890 . C . PASS END=228469892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228469893 . A . PASS END=228469893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 228469894 . C . PASS END=228469896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 228469897 . A . LowGQ END=228469897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:7,0 chr1 228469898 . T . PASS END=228469900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 228469901 . T . PASS END=228469902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 228469903 . A T, 50.00 PASS DP=8;MQ=250.00;MQRankSum=2.017;ReadPosRankSum=0.922;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:4,4,0:0.500,0.000:8:2,1,0:2,3,0:47:85,0,47,185,185,185:167,0,98:3,0:5.0000e+01,9.0084e-05,4.9688e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,3,1,3:3,1,2,2:228469903 chr1 228469904 . G T, 50.00 PASS DP=8;MQ=250.00;MQRankSum=1.920;ReadPosRankSum=1.221;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:3,5,0:0.625,0.000:8:1,2,0:2,3,0:47:85,0,47,185,185,185:161,0,89:2,0:5.0000e+01,9.0084e-05,4.9688e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,2,1,4:3,0,2,3:228469903 chr1 228469905 . A . PASS END=228469906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:6,0 chr1 228470719 . A . PASS END=228470732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,544:0,51,255:18,0 chr1 228470733 . A . PASS END=228470733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:17,0 chr1 228470734 . T . PASS END=228470740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,638:0,54,255:19,0 chr1 228470741 . G . PASS END=228470744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr1 228470745 . C . PASS END=228470748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,659:0,41,255:19,0 chr1 228470749 . A . PASS END=228470750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228470751 . G . PASS END=228470754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,684:0,46,255:19,0 chr1 228470755 . A . PASS END=228470755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:17,0 chr1 228470756 . G . PASS END=228470763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr1 228470764 . C . PASS END=228470767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 228470768 . A . PASS END=228470768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr1 228470769 . G . PASS END=228470769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228470770 . G . PASS END=228470773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 228470774 . G . PASS END=228470797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 228470798 . G . PASS END=228470798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 228470799 . T . PASS END=228470809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,792:0,66,255:22,0 chr1 228470810 . A . PASS END=228470810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 228470811 . A . PASS END=228470814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 228470815 . C . PASS END=228470815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 228470816 . C . PASS END=228470819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228470820 . C . PASS END=228470820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 228470821 . A . PASS END=228470822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228470823 . T . PASS END=228470823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 228470824 . G . PASS END=228470856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,915:0,75,255:25,0 chr1 228470857 . A . PASS END=228470857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 228470858 . G . PASS END=228470871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:26,0 chr1 228470872 . T . PASS END=228470873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228470874 . T . PASS END=228470877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228470878 . A . PASS END=228470878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228470879 . G . PASS END=228470881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 228470882 . C . PASS END=228470884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228470885 . G . PASS END=228470890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 228470891 . C . PASS END=228470894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228470895 . C . PASS END=228470895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228470896 . T . PASS END=228470902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228470903 . C . PASS END=228470953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:20:0,60,745:0,60,255:26,0 chr1 228470954 . T . PASS END=228470977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 228470978 . T . PASS END=228470978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 228470979 . G . PASS END=228470985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 228471204 . A . PASS END=228471227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,882:0,62,255:26,0 chr1 228471228 . A . PASS END=228471236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 228471237 . A . PASS END=228471237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr1 228471238 . T . PASS END=228471242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 228471243 . A . PASS END=228471243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 228471244 . G . PASS END=228471245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 228471246 . T . PASS END=228471246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 228471247 . G . PASS END=228471270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1125:0,80,255:31,0 chr1 228471271 . C . PASS END=228471272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:44:33:0,44,1076:0,44,255:30,0 chr1 228471273 . C . PASS END=228471274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:31,0 chr1 228471275 . T . PASS END=228471275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr1 228471276 . G . PASS END=228471287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,83,255:29,0 chr1 228471288 . A . PASS END=228471288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 228471289 . C . PASS END=228471290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:29,0 chr1 228471291 . C . PASS END=228471291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 228471292 . C . PASS END=228471302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:30,0 chr1 228471303 . T . PASS END=228471303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 228471304 . G . PASS END=228471304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 228471305 . A . PASS END=228471306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1053:0,60,255:29,0 chr1 228471307 . C . PASS END=228471314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 228471315 . A . PASS END=228471341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,914:0,62,255:26,0 chr1 228471342 . G . PASS END=228471346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:23,0 chr1 228471347 . C . PASS END=228471347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 228471348 . A . PASS END=228471354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:26,0 chr1 228471355 . C . PASS END=228471355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:24,0 chr1 228471356 . A . PASS END=228471356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr1 228471357 . G . PASS END=228471371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr1 228471372 . C . PASS END=228471378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 228471379 . G C, 50.00 PASS DP=28;MQ=249.89;MQRankSum=4.468;ReadPosRankSum=2.948;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:7,7,0:6,8,0:48:85,0,50,537,465,1001:255,0,255:13,0:5.0000e+01,6.6786e-05,5.2686e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,10,4,11:5,8,8,7 chr1 228471380 . C . PASS END=228471387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 228471388 . C . PASS END=228471389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228471390 . G . PASS END=228471391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228471392 . G . PASS END=228471412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr1 228471413 . G . PASS END=228471416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:47:26:0,47,810:0,47,255:19,0 chr1 228471417 . C . PASS END=228471417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:19,0 chr1 228471418 . C . PASS END=228471419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 228471420 . A . PASS END=228471441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr1 228471442 . C . PASS END=228471462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 228471463 . A . PASS END=228471463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr1 228471464 . G . PASS END=228471474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr1 228471475 . G . PASS END=228471485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228473779 . G . PASS END=228473794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 228473795 . C . PASS END=228473795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 228473796 . A . PASS END=228473814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,553:0,45,255:18,0 chr1 228473815 . T . PASS END=228473815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 228473816 . G . PASS END=228473834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr1 228473835 . T . PASS END=228473835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 228473836 . C . PASS END=228473853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr1 228473854 . G . PASS END=228473855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 228473856 . A . PASS END=228473856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 228473857 . T . PASS END=228473860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,707:0,63,255:21,0 chr1 228473861 . C . PASS END=228473861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 228473862 . C . PASS END=228473868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr1 228473869 . A . PASS END=228473869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr1 228473870 . C . PASS END=228473873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 228473874 . G . PASS END=228473874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 228473875 . A . PASS END=228473893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 228473894 . G . PASS END=228473894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:20,0 chr1 228473895 . G . PASS END=228473901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr1 228473902 . C . PASS END=228473903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr1 228473904 . C . PASS END=228473906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228473907 . C . PASS END=228473936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 228473937 . G . PASS END=228473939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 228473940 . C . PASS END=228473941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 228473942 . G . PASS END=228473948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228473949 . G . PASS END=228474021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,584:0,40,255:19,0 chr1 228474022 . A . PASS END=228474022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 228474023 . G . PASS END=228474033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr1 228474034 . C . PASS END=228474036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:12,0 chr1 228474037 . C . PASS END=228474037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:10,0 chr1 228474038 . C . PASS END=228474039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr1 228474040 . T . PASS END=228474040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr1 228474041 . G . PASS END=228474042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr1 228474043 . G . PASS END=228474043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 228474044 . G . PASS END=228474051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228474474 . A . PASS END=228474475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 228474476 . A . PASS END=228474476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr1 228474477 . A . PASS END=228474512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,553:0,48,255:19,0 chr1 228474513 . C . PASS END=228474515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228474516 . T . PASS END=228474516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 228474517 . C . PASS END=228474519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 228474520 . A . PASS END=228474520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 228474521 . G . PASS END=228474521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228474522 . A . PASS END=228474522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 228474523 . G . PASS END=228474550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,767:0,64,255:26,0 chr1 228474551 . A . PASS END=228474551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr1 228474552 . C . PASS END=228474562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,937:0,75,255:25,0 chr1 228474563 . G . PASS END=228474563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 228474564 . A . PASS END=228474564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 228474565 . C . PASS END=228474565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 228474566 . A . PASS END=228474566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 228474567 . T . PASS END=228474568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 228474569 . C . PASS END=228474570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 228474571 . T . PASS END=228474571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr1 228474572 . G . PASS END=228474584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 228474585 . A . PASS END=228474585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228474586 . G . PASS END=228474596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,71,255:26,0 chr1 228474597 . C . PASS END=228474649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,652:0,54,255:19,0 chr1 228474650 . C . PASS END=228474650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 228474651 . T . PASS END=228474653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 228474654 . T . PASS END=228474654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 228474655 . C . PASS END=228474667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 228474668 . A . PASS END=228474668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 228474669 . C . PASS END=228474691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 228474692 . A . PASS END=228474693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228474694 . G . PASS END=228474703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 228474704 . G . PASS END=228474704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 228474705 . G . PASS END=228474706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 228474707 . G . PASS END=228474740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr1 228475395 . C . PASS END=228475403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:19,0 chr1 228475404 . T . PASS END=228475407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:21,0 chr1 228475408 . G . PASS END=228475408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 228475409 . T . PASS END=228475417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr1 228475418 . G . PASS END=228475418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 228475419 . C . PASS END=228475427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:25,0 chr1 228475428 . A . PASS END=228475428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:25,0 chr1 228475429 . C . PASS END=228475436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,933:0,64,255:26,0 chr1 228475437 . T . PASS END=228475438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 228475439 . C . PASS END=228475442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr1 228475443 . A . PASS END=228475443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr1 228475444 . G . PASS END=228475451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,921:0,65,255:26,0 chr1 228475452 . C . PASS END=228475460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 228475461 . T . PASS END=228475461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 228475462 . G . PASS END=228475586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1049:0,87,255:38,0 chr1 228475587 . T . PASS END=228475587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 228475588 . C . PASS END=228475601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1202:0,83,255:30,0 chr1 228475602 . G . PASS END=228475603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228475604 . G . PASS END=228475606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 228475607 . C . PASS END=228475617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,77,255:26,0 chr1 228475618 . C . PASS END=228475618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228475619 . T . PASS END=228475644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 228475645 . C . PASS END=228475650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228475651 . C . PASS END=228475652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228475653 . C . PASS END=228475661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 228475762 . C . PASS END=228475764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228475765 . T . PASS END=228475775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 228475776 . T . PASS END=228475776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr1 228475777 . T . PASS END=228475812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 228475813 . G . PASS END=228475824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 228475825 . C . PASS END=228475827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228475828 . T . PASS END=228475830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228475831 . G . PASS END=228475836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228475837 . A . PASS END=228475838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228475839 . C . PASS END=228475839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 228475840 . T . PASS END=228475840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228475841 . G . PASS END=228475853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:19,0 chr1 228475854 . C . PASS END=228475854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228475855 . C . PASS END=228475855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228475856 . T . PASS END=228475856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr1 228475857 . G . PASS END=228475873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,668:0,43,255:19,0 chr1 228475874 . G . PASS END=228475876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 228475877 . C . PASS END=228475895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,637:0,43,255:19,0 chr1 228475896 . G . PASS END=228475957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:24,0 chr1 228475958 . G . PASS END=228475958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 228475959 . G . PASS END=228475965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 228475966 . C . PASS END=228475966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 228475967 . C . PASS END=228475969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 228475970 . G . PASS END=228475972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228475973 . G . PASS END=228475973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 228475974 . T . PASS END=228475974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:19,0 chr1 228475975 . A . PASS END=228475979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr1 228475980 . T . PASS END=228475980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:21,0 chr1 228475981 . G . PASS END=228476000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 228476001 . A . PASS END=228476001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 228476002 . C . PASS END=228476011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr1 228476012 . A . PASS END=228476012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 228476013 . C . PASS END=228476017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 228476018 . C . PASS END=228476018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 228476019 . A . PASS END=228476030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr1 228476031 . A . PASS END=228476031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr1 228476032 . C . PASS END=228476033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228476034 . G . PASS END=228476034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 228476035 . T . PASS END=228476035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228476036 . G . PASS END=228476040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,814:0,53,255:19,0 chr1 228476326 . C . PASS END=228476328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr1 228476329 . T . PASS END=228476329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 228476330 . G . PASS END=228476342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 228476343 . A . PASS END=228476343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 228476344 . T . PASS END=228476356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:19,0 chr1 228476357 . A . PASS END=228476362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr1 228476363 . A . PASS END=228476363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:22,0 chr1 228476364 . G . PASS END=228476365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228476366 . G T, 50.00 PASS DP=23;MQ=248.13;MQRankSum=3.380;ReadPosRankSum=2.574;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,13,0:0.565,0.000:23:7,6,0:3,7,0:47:85,0,46,185,185,185:255,0,255:10,0:5.0000e+01,9.3967e-05,4.9338e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,7,6,7:4,6,5,8:228476366 chr1 228476367 . A T, 50.00 PASS DP=23;MQ=248.13;MQRankSum=3.380;ReadPosRankSum=2.574;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,13,0:0.565,0.000:23:7,6,0:3,7,0:47:85,0,46,185,185,185:255,0,255:9,0:5.0000e+01,9.3967e-05,4.9338e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,7,6,7:4,6,5,8:228476366 chr1 228476368 . G . PASS END=228476381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 228476382 . A . PASS END=228476382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 228476383 . C . PASS END=228476404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,908:0,61,255:26,0 chr1 228476405 . G . PASS END=228476413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 228476414 . G A, 50.00 PASS DP=27;MQ=248.41;MQRankSum=3.782;ReadPosRankSum=2.903;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:7,7,0:5,8,0:48:85,0,49,536,429,966:255,0,255:12,0:5.0000e+01,6.9116e-05,5.2274e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,6,9:5,7,8,7 chr1 228476415 . G . PASS END=228476416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 228476417 . C . PASS END=228476417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228476418 . C . PASS END=228476418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228476419 . C . PASS END=228476432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 228476433 . A . PASS END=228476437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 228476438 . G . PASS END=228476451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:26,0 chr1 228476452 . G . PASS END=228476466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,886:0,61,255:23,0 chr1 228476467 . A . PASS END=228476467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 228476468 . T . PASS END=228476472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228476473 . T . PASS END=228476488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:19,0 chr1 228476489 . T . PASS END=228476497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr1 228476498 . G . PASS END=228476498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:10,0 chr1 228476499 . C . PASS END=228476538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 228476539 . A . PASS END=228476572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 228476573 . C . PASS END=228476580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr1 228476581 . C . PASS END=228476589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr1 228479599 . C . PASS END=228479608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 228479609 . C . PASS END=228479609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 228479610 . A . PASS END=228479611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 228479612 . G . PASS END=228479650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,364:0,30,255:12,0 chr1 228479651 . G . PASS END=228479653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 228479654 . C . PASS END=228479654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr1 228479655 . A . PASS END=228479658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:15,0 chr1 228479659 . C . PASS END=228479659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 228479660 . C . PASS END=228479675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,574:0,45,255:19,0 chr1 228479676 . C . PASS END=228479719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,776:0,63,255:26,0 chr1 228479720 . C . PASS END=228479728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr1 228479729 . T . PASS END=228479729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 228479730 . G . PASS END=228479760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 228479761 . C . PASS END=228479771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 228479772 . C . PASS END=228479772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:26,0 chr1 228479773 . T . PASS END=228479773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 228479774 . G . PASS END=228479776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 228479777 . G . PASS END=228479806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr1 228479807 . G . PASS END=228479838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,52,255:19,0 chr1 228479839 . C . PASS END=228479858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:12,0 chr1 228479859 . A . PASS END=228479859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 228479860 . G . PASS END=228479862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228480224 . C . PASS END=228480244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr1 228480245 . A . PASS END=228480247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 228480248 . A . PASS END=228480281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:21,0 chr1 228480282 . A G, 109.75 PASS DP=21;MQ=236.33;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,11,0:0,10,0:60:148,63,0,785,63,785:255,63,0:0,0:1.0975e+02,5.9749e+01,4.6595e-06,4.5000e+02,9.4519e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,9:0,0,12,9 chr1 228480283 . G . PASS END=228480295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 228480296 . G . PASS END=228480297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 228480298 . G . PASS END=228480298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228480299 . A . PASS END=228480299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228480300 . G . PASS END=228480319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr1 228480320 . T . PASS END=228480335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:18:0,51,682:0,54,255:18,0 chr1 228480336 . G . PASS END=228480345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr1 228480346 . C . PASS END=228480346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 228480347 . T . PASS END=228480348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 228480349 . A . PASS END=228480349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 228480350 . G . PASS END=228480361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr1 228480362 . G . PASS END=228480449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1086:0,80,255:36,0 chr1 228480450 . C . PASS END=228480450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr1 228480451 . G . PASS END=228480484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,89,255:33,0 chr1 228480485 . G . PASS END=228480485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228480486 . G . PASS END=228480487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 228481054 . C . PASS END=228481063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228481064 . C . PASS END=228481066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228481067 . G . PASS END=228481095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,690:0,51,255:19,0 chr1 228481096 . C . PASS END=228481101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 228481102 . A . PASS END=228481105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 228481106 . G . PASS END=228481123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:26,0 chr1 228481124 . G . PASS END=228481124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 228481125 . T . PASS END=228481126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228481127 . T . PASS END=228481130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228481131 . C . PASS END=228481132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228481133 . G . PASS END=228481147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 228481148 . C . PASS END=228481152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228481153 . A . PASS END=228481225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,83,255:36,0 chr1 228481226 . G . PASS END=228481226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 228481227 . C . PASS END=228481261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1227:0,86,255:34,0 chr1 228481262 . G . PASS END=228481276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:26,0 chr1 228481277 . G . PASS END=228481277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 228481278 . T . PASS END=228481290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 228481291 . G . PASS END=228481291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:19,0 chr1 228481292 . G . PASS END=228481295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,63,255:19,0 chr1 228481296 . T . PASS END=228481296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:16,0 chr1 228481297 . C . PASS END=228481312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:16,0 chr1 228481313 . C . PASS END=228481314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228481315 . G . PASS END=228481317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 228481853 . C . PASS END=228481855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr1 228481856 . T . PASS END=228481856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 228481857 . G . PASS END=228481859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,692:0,44,255:19,0 chr1 228481860 . T . PASS END=228481884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,725:0,62,255:26,0 chr1 228481885 . A . PASS END=228481990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,956:0,80,255:39,0 chr1 228481991 . G . PASS END=228482027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1402:0,98,255:38,0 chr1 228482028 . G C, 50.00 PASS DP=40;MQ=244.17;MQRankSum=3.088;ReadPosRankSum=3.385;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:12,6,0:7,15,0:48:85,0,50,722,672,1394:255,0,255:18,0:5.0000e+01,6.6010e-05,5.2827e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,6,15:7,12,17,4 chr1 228482029 . C . PASS END=228482065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,108,255:37,0 chr1 228482066 . A . PASS END=228482076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:31,0 chr1 228482077 . T . PASS END=228482088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:25,0 chr1 228482089 . A . PASS END=228482089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:23,0 chr1 228482090 . G . PASS END=228482100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr1 228482101 . A . PASS END=228482101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 228482102 . C . PASS END=228482113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 228482114 . G . PASS END=228482115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 228482116 . G . PASS END=228482116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 228482481 . C . PASS END=228482485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,1000:0,78,255:26,0 chr1 228482486 . C . PASS END=228482493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 228482494 . A . PASS END=228482494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,881:0,70,255:28,0 chr1 228482495 . T . PASS END=228482495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr1 228482496 . T . PASS END=228482496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 228482497 . C . PASS END=228482513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1048:0,84,255:29,0 chr1 228482514 . A . PASS END=228482514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr1 228482515 . C . PASS END=228482665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1003:0,82,255:40,0 chr1 228482666 . G . PASS END=228482666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1433:0,68,255:37,0 chr1 228482667 . G . PASS END=228482708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,102,1530:0,111,255:40,0 chr1 228482709 . G . PASS END=228482709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:33,0 chr1 228482710 . G . PASS END=228482719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:33,0 chr1 228482720 . A . PASS END=228482720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:28,0 chr1 228482721 . C . PASS END=228482728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:29,0 chr1 228482729 . A . PASS END=228482742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr1 228482743 . G . PASS END=228482743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 228482744 . G . PASS END=228482744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 228486087 . A . PASS END=228486231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:33:0,82,1141:0,82,255:40,0 chr1 228486232 . C . PASS END=228486233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:31:0,75,1125:0,93,255:25,0 chr1 228486234 . G . PASS END=228486237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,92,255:30,0 chr1 228486238 . A . PASS END=228486238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:26,0 chr1 228486239 . A . PASS END=228486250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1155:0,83,255:30,0 chr1 228486251 . T . PASS END=228486251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 228486252 . G . PASS END=228486252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr1 228486253 . G . PASS END=228486253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 228486254 . A . PASS END=228486254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr1 228486255 . A . PASS END=228486255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 228486256 . T . PASS END=228486263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 228486264 . G . PASS END=228486264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228486265 . G . PASS END=228486332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1143:0,83,255:34,0 chr1 228486333 . G . PASS END=228486334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 228486335 . T . PASS END=228486348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr1 228486349 . G . PASS END=228486366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 228486367 . T . PASS END=228486380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:24,0 chr1 228486381 . T . PASS END=228486381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 228486382 . G . PASS END=228486403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 228486404 . C T, 49.68 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=1.022;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:6,6,0:6,4,0:48:84,0,50,358,400,758:255,0,255:11,0:4.9680e+01,6.8598e-05,5.3000e+01,3.5757e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,6,4:7,5,4,6 chr1 228486405 . G . PASS END=228486409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 228486410 . C . PASS END=228486418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 228486960 . C . PASS END=228486970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 228486971 . A . PASS END=228486971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 228486972 . G . PASS END=228486972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 228486973 . G . PASS END=228486982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228486983 . G . PASS END=228486983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 228486984 . G . PASS END=228486992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228486993 . A . PASS END=228486993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:13,0 chr1 228486994 . T . PASS END=228486994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228486995 . G . PASS END=228486995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228486996 . A . PASS END=228486997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228486998 . G . PASS END=228486999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228487000 . G . PASS END=228487016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,698:0,54,255:19,0 chr1 228487017 . C . PASS END=228487018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228487019 . G . PASS END=228487019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 228487020 . C . PASS END=228487020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228487021 . C . PASS END=228487024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 228487025 . C . PASS END=228487027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 228487028 . C . PASS END=228487028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 228487029 . A . PASS END=228487049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:26,0 chr1 228487050 . C . PASS END=228487080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:30,0 chr1 228487081 . T . PASS END=228487081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 228487082 . C . PASS END=228487088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 228487089 . A . PASS END=228487089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1017:0,54,255:29,0 chr1 228487090 . T . PASS END=228487116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1111:0,90,255:31,0 chr1 228487117 . C . PASS END=228487123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr1 228487124 . G . PASS END=228487138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1070:0,84,255:29,0 chr1 228487139 . A . PASS END=228487139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:26,0 chr1 228487140 . T . PASS END=228487140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228487141 . T . PASS END=228487149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 228487150 . G . PASS END=228487154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228487155 . T . PASS END=228487157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228487158 . C . PASS END=228487160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228487161 . A . PASS END=228487167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 228487168 . G . PASS END=228487173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,67,255:19,0 chr1 228487174 . C . PASS END=228487183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:22,0 chr1 228487184 . T . PASS END=228487196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,645:0,43,255:19,0 chr1 228487197 . G . PASS END=228487199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 228487200 . C . PASS END=228487220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,582:0,48,255:16,0 chr1 228487221 . G . PASS END=228487223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228487583 . C . PASS END=228487597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:19,0 chr1 228487598 . T . PASS END=228487610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:24,0 chr1 228487611 . G . PASS END=228487611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 228487612 . A . PASS END=228487617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 228487618 . C . PASS END=228487618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 228487619 . A . PASS END=228487629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,801:0,69,255:25,0 chr1 228487630 . G . PASS END=228487630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 228487631 . A . PASS END=228487661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,908:0,61,255:26,0 chr1 228487662 . G . PASS END=228487662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228487663 . A . PASS END=228487664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 228487665 . A . PASS END=228487672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 228487673 . C . PASS END=228487673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr1 228487674 . C . PASS END=228487678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 228487679 . T . PASS END=228487679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 228487680 . G . PASS END=228487781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1181:0,86,255:34,0 chr1 228487782 . A . PASS END=228487782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 228487783 . G . PASS END=228487785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 228487786 . G . PASS END=228487805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 228487806 . A . PASS END=228487814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:19,0 chr1 228487815 . G . PASS END=228487815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:17,0 chr1 228487816 . G . PASS END=228487843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 228487844 . G . PASS END=228487845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228487846 . G . PASS END=228487849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 228487850 . A . PASS END=228487857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 228487858 . A . PASS END=228487858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 228487859 . T . PASS END=228487859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 228487860 . G . PASS END=228487861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:12:0,21,315:0,36,255:7,0 chr1 228491376 . C . PASS END=228491381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 228491382 . C . PASS END=228491382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 228491383 . G . PASS END=228491398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 228491399 . G . PASS END=228491399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 228491400 . A . PASS END=228491434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr1 228491435 . G . PASS END=228491459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:19,0 chr1 228491460 . A . PASS END=228491473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 228491474 . G . PASS END=228491485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 228491486 . G . PASS END=228491486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228491487 . G . PASS END=228491487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 228491488 . G . PASS END=228491488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 228491489 . T . PASS END=228491489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 228491490 . C . PASS END=228491492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr1 228491493 . A . PASS END=228491493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 228491494 . G . PASS END=228491503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228491504 . G . PASS END=228491504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 228491505 . A . PASS END=228491505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,640:0,27,255:21,0 chr1 228491506 . T . PASS END=228491512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 228491513 . A . PASS END=228491513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 228491514 . G . PASS END=228491521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 228491522 . C . PASS END=228491522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 228491523 . T . PASS END=228491528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:23,0 chr1 228491529 . A . PASS END=228491529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 228491530 . G . PASS END=228491531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 228491532 . A . PASS END=228491532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 228491533 . C . PASS END=228491534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 228491535 . G . PASS END=228491536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 228491537 . A . PASS END=228491552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr1 228491553 . A . PASS END=228491553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 228491554 . G . PASS END=228491558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 228491559 . G . PASS END=228491581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 228491582 . G . PASS END=228491590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:19:0,30,450:0,57,255:13,0 chr1 228491591 . T . PASS END=228491593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 228491594 . T . PASS END=228491595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228491596 . T . PASS END=228491596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr1 228491597 . G . PASS END=228491598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 228491599 . G . PASS END=228491599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 228491600 . T . PASS END=228491607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:12,0 chr1 228491608 . G . LowGQ END=228491608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr1 228491609 . G . PASS END=228491639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr1 228492004 . C . PASS END=228492027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr1 228492028 . A . PASS END=228492028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 228492029 . C . PASS END=228492036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 228492037 . A . PASS END=228492037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,423:0,31,255:14,0 chr1 228492038 . C . PASS END=228492047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228492048 . A . PASS END=228492048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 228492049 . G . PASS END=228492051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228492052 . A . PASS END=228492052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,491:0,34,255:15,0 chr1 228492053 . A . PASS END=228492057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 228492058 . C . PASS END=228492065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr1 228492066 . A . PASS END=228492069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr1 228492070 . T . PASS END=228492070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 228492071 . G . PASS END=228492087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,675:0,44,255:17,0 chr1 228492088 . A . PASS END=228492101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,808:0,62,255:26,0 chr1 228492102 . G . PASS END=228492103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 228492104 . G . PASS END=228492105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 228492106 . G . PASS END=228492106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 228492107 . G . PASS END=228492124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,945:0,64,255:26,0 chr1 228492125 . C . PASS END=228492127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 228492128 . C . PASS END=228492131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 228492132 . G . PASS END=228492141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228492142 . G . PASS END=228492142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 228492143 . A . PASS END=228492200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1278:0,89,255:39,0 chr1 228492201 . G . PASS END=228492201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 228492202 . C . PASS END=228492220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,96,255:36,0 chr1 228492221 . G . PASS END=228492232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,71,255:27,0 chr1 228492233 . G . PASS END=228492233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 228492234 . C . PASS END=228492235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:20,0 chr1 228492236 . G . PASS END=228492241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 228492242 . G . PASS END=228492243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228492244 . C . PASS END=228492246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228492247 . C . PASS END=228492257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 228492258 . A . PASS END=228492267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 228492824 . C . PASS END=228492825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 228492826 . C . PASS END=228492826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 228492827 . T . PASS END=228492835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228492836 . A . PASS END=228492836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 228492837 . G . PASS END=228492839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr1 228492840 . C . PASS END=228492840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 228492841 . A . PASS END=228492847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 228492848 . G . PASS END=228492867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:30,0 chr1 228492868 . A . PASS END=228492868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228492869 . C . PASS END=228493071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1133:0,80,255:40,0 chr1 228493072 . A . PASS END=228493072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 228493073 . C . PASS END=228493075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 228493076 . T . PASS END=228493076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr1 228493077 . C . PASS END=228493078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228493079 . C . PASS END=228493079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 228493080 . T . PASS END=228493082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 228493083 . C . PASS END=228493087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr1 228494073 . C . PASS END=228494091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,94:3,0 chr1 228494092 . G . PASS END=228494098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr1 228494099 . C . LowGQ END=228494099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 228494100 . T . PASS END=228494117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 228494118 . A . PASS END=228494118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 228494119 . G . PASS END=228494120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 228494121 . A . PASS END=228494121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 228494122 . G . PASS END=228494123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 228494124 . G . PASS END=228494124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 228494125 . C . PASS END=228494137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:8,0 chr1 228494138 . C . PASS END=228494138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 228494139 . T . PASS END=228494141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 228494142 . A . PASS END=228494143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 228494144 . T . PASS END=228494144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 228494145 . G . PASS END=228494145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 228494146 . T . PASS END=228494166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:9,0 chr1 228494167 . T . PASS END=228494167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 228494168 . A . PASS END=228494169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 228494170 . A . LowGQ END=228494170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:7,0 chr1 228494171 . G . PASS END=228494174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 228494175 . T . LowGQ END=228494175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:12,0,253:8,0 chr1 228494176 . C . PASS END=228494177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 228494178 . G . PASS END=228494178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 228494179 . G . PASS END=228494187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,297:0,30,255:10,0 chr1 228494188 . T . PASS END=228494188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 228494189 . G . PASS END=228494190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 228494191 . C . PASS END=228494191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr1 228494192 . C . PASS END=228494192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 228494193 . T . PASS END=228494194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:9,0 chr1 228494195 . C . PASS END=228494196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,283:0,30,255:10,0 chr1 228494197 . G . PASS END=228494197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,221:0,13,221:8,0 chr1 228494198 . C . PASS END=228494198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228494199 . T . LowGQ END=228494200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,213:1,0,222:8,0 chr1 228494201 . C . PASS END=228494201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228494202 . A . PASS END=228494202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,244:0,16,244:8,0 chr1 228494203 . G . PASS END=228494207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 228494208 . A . PASS END=228494208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,321:0,8,255:11,0 chr1 228494209 . T . PASS END=228494209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 228494210 . G . PASS END=228494213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 228494214 . G . LowGQ END=228494214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,319:16,0,255:11,0 chr1 228494215 . C . PASS END=228494215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 228494216 . C . PASS END=228494216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:12,0 chr1 228494217 . G . PASS END=228494221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 228494222 . C . PASS END=228494222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 228494223 . C . PASS END=228494224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 228494225 . C . PASS END=228494225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228494226 . G . PASS END=228494226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:12,0 chr1 228494227 . G . PASS END=228494228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228494229 . T . PASS END=228494229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 228494230 . T . PASS END=228494232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 228494233 . G . PASS END=228494233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:11,0 chr1 228494234 . G . PASS END=228494235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228494236 . C . PASS END=228494240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228494241 . C . PASS END=228494241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 228494242 . C . PASS END=228494243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 228494244 . C . PASS END=228494247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228494248 . G . PASS END=228494248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 228494249 . C . PASS END=228494249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228494250 . T . PASS END=228494250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:12,0 chr1 228494251 . G . PASS END=228494251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228494252 . G . PASS END=228494252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228494253 . T . PASS END=228494254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228494255 . T . PASS END=228494256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228494257 . A . PASS END=228494257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,478:0,15,255:13,0 chr1 228494258 . C . PASS END=228494259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228494260 . G . PASS END=228494261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228494262 . A . PASS END=228494270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228494271 . G . PASS END=228494271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 228494272 . T . PASS END=228494275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228494276 . G . PASS END=228494276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 228494277 . A . PASS END=228494277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 228494278 . C . PASS END=228494278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 228494279 . A . PASS END=228494291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 228494292 . C . PASS END=228494292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 228494293 . T . PASS END=228494294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 228494295 . G . PASS END=228494295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 228494296 . C . PASS END=228494299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228494300 . T . PASS END=228494300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:13,0 chr1 228494301 . G . PASS END=228494302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228494303 . G . PASS END=228494307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228494308 . C . PASS END=228494308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:13,0 chr1 228494309 . C . PASS END=228494318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228494319 . G . PASS END=228494319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr1 228494320 . T . PASS END=228494339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 228494602 . C . PASS END=228494609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228494610 . G . PASS END=228494610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 228494611 . T . PASS END=228494644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,529:0,41,255:19,0 chr1 228494645 . G . PASS END=228494658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr1 228494659 . C . PASS END=228494659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 228494660 . C . PASS END=228494665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228494666 . C . PASS END=228494666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 228494667 . T . PASS END=228494677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 228494678 . G . PASS END=228494678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 228494679 . C . PASS END=228494681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:25,0 chr1 228494682 . A . PASS END=228494682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr1 228494683 . G . PASS END=228494688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:25,0 chr1 228494689 . C . PASS END=228494689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 228494690 . G . PASS END=228494690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228494691 . G . PASS END=228494691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 228494692 . G . PASS END=228494695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 228494696 . G A, 130.81 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,11,0:0,17,0:81:169,84,0,1048,84,1048:255,84,0:0,0:1.3081e+02,8.0808e+01,0.0000e+00,4.5000e+02,1.1558e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,11:0,0,10,18 chr1 228494697 . A . PASS END=228494698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228494699 . C . PASS END=228494699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr1 228494700 . G . PASS END=228494700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228494701 . T . PASS END=228494701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 228494702 . G . PASS END=228494702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228494703 . G . PASS END=228494703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:28,0 chr1 228494704 . A . PASS END=228494733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1103:0,90,255:35,0 chr1 228494734 . C . PASS END=228494830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,83,255:39,0 chr1 228494831 . G . PASS END=228494851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr1 228494852 . C . PASS END=228494868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,692:0,46,255:19,0 chr1 228494960 . T . PASS END=228494973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,576:0,45,255:19,0 chr1 228494974 . T . PASS END=228494974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:18,0 chr1 228494975 . T . PASS END=228494982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,705:0,60,255:20,0 chr1 228494983 . C . PASS END=228494992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 228494993 . G . PASS END=228495000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 228495001 . C . PASS END=228495003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 228495004 . G . PASS END=228495024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,792:0,63,255:26,0 chr1 228495025 . C . PASS END=228495025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:23,0 chr1 228495026 . T . PASS END=228495033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 228495034 . C . PASS END=228495109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1133:0,80,255:34,0 chr1 228495110 . A . PASS END=228495110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:27:32:0,27,1041:0,27,255:28,0 chr1 228495111 . C . PASS END=228495114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:28,0 chr1 228495115 . A . PASS END=228495115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1127:0,71,255:29,0 chr1 228495116 . T . PASS END=228495126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:30,0 chr1 228495127 . G . PASS END=228495128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:29,0 chr1 228495129 . G . PASS END=228495130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1147:0,90,255:30,0 chr1 228495131 . C . PASS END=228495131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228495132 . C . PASS END=228495132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr1 228495133 . A . PASS END=228495169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,64,255:26,0 chr1 228495170 . A . PASS END=228495170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 228495171 . C . PASS END=228495175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 228495176 . G . PASS END=228495212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 228495213 . T . PASS END=228495214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 228495215 . C . PASS END=228495227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 228495228 . C . PASS END=228495232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 228495812 . A . PASS END=228495812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 228495813 . G . PASS END=228495815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 228495816 . T . PASS END=228495823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,915:0,64,255:26,0 chr1 228495824 . C . PASS END=228495831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1197:0,87,255:33,0 chr1 228495832 . C . PASS END=228495832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:31,0 chr1 228495833 . G . PASS END=228495855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:33:0,96,1227:0,96,255:40,0 chr1 228495856 . A . PASS END=228495856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:47:42:0,47,1127:0,47,255:37,0 chr1 228495857 . C . PASS END=228495906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1194:0,83,255:40,0 chr1 228495907 . A . PASS END=228495909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1011:0,60,255:26,0 chr1 228495910 . G . PASS END=228495930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 228495931 . G . PASS END=228495931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:25,0 chr1 228495932 . G . PASS END=228495934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 228495935 . T . PASS END=228495940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1124:0,77,255:26,0 chr1 228495941 . T . PASS END=228495943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228495944 . A . PASS END=228495976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,923:0,70,255:26,0 chr1 228495977 . A . PASS END=228495991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr1 228495992 . C . PASS END=228496013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1041:0,84,255:29,0 chr1 228496014 . G A, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.539;ReadPosRankSum=1.557;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,16,0:0.552,0.000:29:4,7,0:9,9,0:48:85,0,49,572,465,1037:255,0,255:13,0:5.0000e+01,6.8857e-05,5.2326e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,6,10:9,4,9,7 chr1 228496015 . C . PASS END=228496020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 228496021 . G . PASS END=228496022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 228496023 . C . PASS END=228496025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228496026 . T . PASS END=228496026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 228496027 . G . PASS END=228496031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr1 228496032 . T . PASS END=228496032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 228496033 . G . PASS END=228496033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1033:0,41,255:30,0 chr1 228496034 . T . PASS END=228496042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1083:0,80,255:32,0 chr1 228496043 . A . PASS END=228496043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:29,0 chr1 228496044 . T . PASS END=228496050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 228496051 . A . PASS END=228496051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 228496052 . A . PASS END=228496060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:30,0 chr1 228496061 . C . PASS END=228496061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 228496062 . C . PASS END=228496069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:29,0 chr1 228496070 . A . PASS END=228496071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 228496072 . C . PASS END=228496072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228496073 . T . PASS END=228496073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 228496074 . C . PASS END=228496075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228496076 . C . PASS END=228496076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr1 228496077 . C . PASS END=228496081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228496082 . G . PASS END=228496083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 228496084 . G . PASS END=228496088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228496089 . C . PASS END=228496089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 228496090 . C . PASS END=228496094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228496095 . G . PASS END=228496103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,986:0,67,255:26,0 chr1 228496104 . A . PASS END=228496104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228496105 . C . PASS END=228496108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 228496109 . T . PASS END=228496109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:25,0 chr1 228496110 . G . PASS END=228496112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 228496113 . T . PASS END=228496113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 228496114 . G . PASS END=228496129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,61,255:26,0 chr1 228496130 . T . PASS END=228496134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228496135 . G . PASS END=228496135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228496136 . C . PASS END=228496162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 228496163 . A . PASS END=228496165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228496800 . C . PASS END=228496805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 228496806 . A . PASS END=228496806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 228496807 . G . PASS END=228496813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:12,0 chr1 228496814 . A . PASS END=228496814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,349:0,6,255:10,0 chr1 228496815 . T . PASS END=228496820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 228496821 . A . PASS END=228496821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 228496822 . G . PASS END=228496824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 228496825 . C . PASS END=228496838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr1 228496839 . A . PASS END=228496839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 228496840 . G . PASS END=228496871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,560:0,40,255:19,0 chr1 228496872 . G . PASS END=228496873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 228496874 . C . PASS END=228496891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,599:0,40,255:19,0 chr1 228496892 . G . PASS END=228496896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228496897 . G . PASS END=228496897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr1 228496898 . G . PASS END=228496913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 228496914 . T . PASS END=228496914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 228496915 . A . PASS END=228496915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 228496916 . G . PASS END=228496917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,696:0,44,255:20,0 chr1 228496918 . A . PASS END=228496922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 228496923 . T . PASS END=228496923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 228496924 . G . PASS END=228496925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228496926 . C . PASS END=228496926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 228496927 . C . PASS END=228496930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228496931 . C . PASS END=228496933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:18,0 chr1 228496934 . G . PASS END=228496934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:16,0 chr1 228496935 . C . PASS END=228496952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:18,0 chr1 228496953 . T . PASS END=228496955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228496956 . C . PASS END=228496958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228496959 . T . PASS END=228496966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr1 228496967 . G . PASS END=228496967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 228496968 . G . PASS END=228496969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 228496970 . A . PASS END=228496970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:11,0 chr1 228496971 . C . PASS END=228496978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 228496979 . C . PASS END=228496980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 228496981 . G . PASS END=228496981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 228496982 . C . PASS END=228496982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228496983 . T . PASS END=228496996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:12,0 chr1 228497185 . G . PASS END=228497248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr1 228497249 . T . PASS END=228497260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 228501315 . A . PASS END=228501323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 228501324 . C T, 49.14 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=1.147;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,10,0:0.435,0.000:23:4,5,0:9,5,0:48:84,0,50,358,465,823:255,0,255:13,0:4.9145e+01,7.4552e-05,5.3000e+01,3.5762e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,5,5:6,7,8,2 chr1 228501325 . G . PASS END=228501331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 228501332 . G . PASS END=228501361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:31,0 chr1 228501362 . G . PASS END=228501373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1180:0,93,255:31,0 chr1 228501374 . G . PASS END=228501377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228501378 . C . PASS END=228501381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 228501382 . C . PASS END=228501383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 228501384 . C . PASS END=228501391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 228501392 . G . PASS END=228501404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 228501405 . G . PASS END=228501405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 228501406 . T . PASS END=228501407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 228501408 . G . PASS END=228501409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228501410 . C . PASS END=228501414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228501415 . G . PASS END=228501422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 228501423 . G . PASS END=228501444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 228501445 . A . PASS END=228501447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 228501448 . G . PASS END=228501459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:21,0 chr1 228501460 . G . PASS END=228501460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,2 chr1 228501461 . A . PASS END=228501461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,753:0,3,255:21,2 chr1 228501462 . G . PASS END=228501462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 228501463 . C . PASS END=228501485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr1 228501486 . T . PASS END=228501515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,620:0,48,255:18,0 chr1 228501516 . G . PASS END=228501516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 228501517 . G . PASS END=228501532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,584:0,51,255:17,0 chr1 228501533 . A . PASS END=228501555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 228501556 . C . PASS END=228501556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:10,0 chr1 228501557 . C . PASS END=228501585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:11,0 chr1 228501586 . A . PASS END=228501587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 228502515 . A . PASS END=228502522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,605:0,51,255:19,0 chr1 228502523 . G . PASS END=228502543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:24,0 chr1 228502544 . C . PASS END=228502544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 228502545 . A . PASS END=228502561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 228502562 . G . PASS END=228502562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 228502563 . A . PASS END=228502563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr1 228502564 . G . PASS END=228502565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr1 228502566 . G . PASS END=228502566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 228502567 . T . PASS END=228502567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:24,0 chr1 228502568 . G . PASS END=228502570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228502571 . T . PASS END=228502571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 228502572 . C . PASS END=228502572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228502573 . G . PASS END=228502573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,820:0,20,255:22,0 chr1 228502574 . G . PASS END=228502575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 228502576 . T . PASS END=228502576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 228502577 . G . PASS END=228502577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:23,0 chr1 228502578 . A . PASS END=228502578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr1 228502579 . G . PASS END=228502579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 228502580 . C . PASS END=228502583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:21,0 chr1 228502584 . T . PASS END=228502584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 228502585 . C . PASS END=228502587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 228502588 . C . PASS END=228502588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 228502589 . C . PASS END=228502590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:20,0 chr1 228502591 . G . PASS END=228502591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228502592 . T . PASS END=228502597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:22:0,30,775:0,30,255:19,0 chr1 228502598 . C . PASS END=228502598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:18,0 chr1 228502599 . G . PASS END=228502599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr1 228502600 . G . PASS END=228502600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228502601 . C . PASS END=228502601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:19,0 chr1 228502602 . C . PASS END=228502604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,753:0,49,255:20,0 chr1 228502605 . T . PASS END=228502606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:20,0 chr1 228502607 . C . PASS END=228502607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228502608 . A . PASS END=228502608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr1 228502609 . G . PASS END=228502612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 228502613 . A . PASS END=228502613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr1 228502614 . C . PASS END=228502614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 228502615 . G . PASS END=228502617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr1 228502618 . G . PASS END=228502619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 228502620 . A . PASS END=228502620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 228502621 . G . PASS END=228502626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr1 228502627 . C . PASS END=228502627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 228502628 . G . PASS END=228502646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 228502647 . A . PASS END=228502647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 228502648 . T . PASS END=228502654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 228502655 . C . PASS END=228502655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 228502656 . G . PASS END=228502664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:15,0 chr1 228502665 . T . PASS END=228502665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:12,0 chr1 228502666 . A . PASS END=228502669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 228502670 . C . PASS END=228502672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228502673 . G . PASS END=228502709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 228502710 . T . PASS END=228502711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 228502712 . C . PASS END=228502712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:11,0 chr1 228502713 . C . PASS END=228502718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 228502719 . A . PASS END=228502719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr1 228502720 . C . PASS END=228502729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 228502730 . T . PASS END=228502730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr1 228502731 . A . PASS END=228502759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 228502760 . G . PASS END=228502760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 228502761 . T . PASS END=228502771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 228502772 . C . PASS END=228502781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 228503548 . C . PASS END=228503552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:13,0 chr1 228503553 . A . PASS END=228503553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr1 228503554 . A . PASS END=228503558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 228503559 . G . PASS END=228503562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:16,0 chr1 228503563 . T . PASS END=228503563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 228503564 . G . PASS END=228503565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 228503566 . G . PASS END=228503566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 228503567 . G . PASS END=228503588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,538:0,48,255:19,0 chr1 228503589 . C . PASS END=228503597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 228503598 . G . PASS END=228503598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr1 228503599 . G . PASS END=228503621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 228503622 . C . PASS END=228503622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr1 228503623 . T . PASS END=228503623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 228503624 . G . PASS END=228503632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 228503633 . C . PASS END=228503633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 228503634 . G . PASS END=228503639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 228503640 . G . PASS END=228503648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 228503649 . A . PASS END=228503649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:17,0 chr1 228503650 . C . PASS END=228503676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr1 228503677 . A G, 106.73 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,11,0:0,9,0:57:145,60,0,734,60,734:255,60,0:0,0:1.0673e+02,5.6727e+01,9.3190e-06,4.5000e+02,9.1497e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,10:0,0,11,9 chr1 228503678 . C . PASS END=228503693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 228503694 . G . PASS END=228503697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228503698 . T . PASS END=228503714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,674:0,44,255:19,0 chr1 228503715 . G . PASS END=228503797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,574:0,41,255:19,0 chr1 228503798 . G . PASS END=228503800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228503801 . C . PASS END=228503801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:12,0 chr1 228503802 . G . PASS END=228503820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 228504410 . G . PASS END=228504411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 228504412 . T . PASS END=228504412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 228504413 . G . PASS END=228504424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,399:0,33,255:13,0 chr1 228504425 . T . PASS END=228504434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 228504435 . T . PASS END=228504448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228504449 . C . PASS END=228504450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr1 228504451 . G . PASS END=228504471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr1 228504472 . T C, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,6,0:0,11,0:48:136,51,0,651,51,651:255,51,0:0,0:9.8162e+01,4.8162e+01,6.6269e-05,4.5000e+02,8.2932e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,7:0,0,9,8 chr1 228504473 . G . PASS END=228504509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:16,0 chr1 228504510 . A . PASS END=228504540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:15:0,43,521:0,43,255:19,0 chr1 228504541 . G . PASS END=228504551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:23,0 chr1 228504552 . T . PASS END=228504552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 228504553 . G . PASS END=228504553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228504554 . A . PASS END=228504590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr1 228504591 . C A, 40.08 PASS DP=24;MQ=250.00;MQRankSum=3.747;ReadPosRankSum=0.254;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,7,0:0.292,0.000:24:7,1,0:10,6,0:40:75,0,50,213,608,821:169,0,255:15,0:4.0085e+01,4.4759e-04,5.3000e+01,2.1345e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,11,1,6:12,5,5,2 chr1 228504592 . G . PASS END=228504613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 228504614 . A . PASS END=228504619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 228504620 . A . PASS END=228504620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228504621 . C . PASS END=228504623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228504624 . C . PASS END=228504626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 228504627 . C . PASS END=228504627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228504628 . G . PASS END=228504628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr1 228504629 . G . PASS END=228504635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 228504636 . C . PASS END=228504654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 228504655 . G . PASS END=228504661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,37,255:13,0 chr1 228504662 . C . PASS END=228504668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:16:0,24,360:0,48,255:9,0 chr1 228504669 . G A, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=0.893;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,8,0:0.500,0.000:16:4,1,0:4,7,0:48:85,0,50,278,277,555:232,0,240:4,0:5.0000e+01,6.5233e-05,5.3000e+01,2.7779e+02,3.1153e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,7,3,5:5,3,4,4 chr1 228504670 . C . PASS END=228504676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:12:13:0,12,180:0,39,255:6,0 chr1 228504677 . C . PASS END=228504685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:3:11:0,3,45:0,33,255:2,0 chr1 228505165 . G . PASS END=228505166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 228505167 . C . PASS END=228505188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 228505189 . C . PASS END=228505191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 228505192 . A . PASS END=228505192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 228505193 . G . PASS END=228505198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,221:0,24,221:8,0 chr1 228505199 . G . PASS END=228505199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 228505200 . G . PASS END=228505203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 228505204 . G A, 68.14 PASS DP=7;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,4,0:0,3,0:18:106,21,0,271,21,271:255,24,0:0,0:6.8135e+01,1.8135e+01,6.7260e-02,2.6850e+02,5.2905e+01,2.7150e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,3:0,0,3,4 chr1 228505205 . C . PASS END=228505210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:9,0 chr1 228505211 . C . PASS END=228505211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 228505212 . C . PASS END=228505213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr1 228505214 . C . PASS END=228505214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr1 228505215 . A . LowGQ END=228505215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,251:1,0,252:9,0 chr1 228505216 . C . PASS END=228505217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 228505218 . G . PASS END=228505224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 228505225 . T . PASS END=228505225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,339:0,3,255:10,0 chr1 228505226 . G . PASS END=228505226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228505227 . T . PASS END=228505227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,531:0,15,255:16,0 chr1 228505228 . C . PASS END=228505241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr1 228505242 . A . PASS END=228505245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228505246 . G . PASS END=228505256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,683:0,60,255:20,0 chr1 228505257 . G . PASS END=228505260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 228505261 . G . PASS END=228505275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,615:0,43,255:19,0 chr1 228505276 . G . PASS END=228505277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 228505278 . G . PASS END=228505289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr1 228505290 . G . PASS END=228505291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228505292 . G . PASS END=228505292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 228505293 . G . PASS END=228505294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,629:0,8,255:19,0 chr1 228505295 . G . PASS END=228505295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,645:0,16,255:18,0 chr1 228505296 . G . PASS END=228505296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:18,0 chr1 228505297 . C . PASS END=228505331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,799:0,63,255:23,0 chr1 228505332 . C . PASS END=228505353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:23,0 chr1 228505354 . A . PASS END=228505369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:19,0 chr1 228505370 . G . PASS END=228505375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,37,255:13,0 chr1 228505376 . C . PASS END=228505379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228505380 . C . PASS END=228505407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 228505408 . T . PASS END=228505441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:9,0 chr1 228505442 . A . PASS END=228505452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr1 228505593 . C . PASS END=228505612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,410:0,33,255:12,0 chr1 228505613 . C . PASS END=228505613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr1 228505614 . C . PASS END=228505615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 228505616 . C . PASS END=228505630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,488:0,42,255:16,0 chr1 228505631 . C . PASS END=228505640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,526:0,51,255:18,0 chr1 228505641 . G . PASS END=228505641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 228505642 . G . PASS END=228505651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr1 228505652 . G . PASS END=228505652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 228505653 . C . PASS END=228505667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr1 228505668 . C G, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,9,0:0,11,0:57:145,60,0,776,60,776:255,60,0:0,0:1.0719e+02,5.7194e+01,8.2835e-06,4.5000e+02,9.1964e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,4:0,0,7,13 chr1 228505669 . T . PASS END=228505673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228505674 . A . PASS END=228505676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 228505677 . T . PASS END=228505677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 228505678 . T . PASS END=228505698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,870:0,66,255:25,0 chr1 228505699 . T C, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,9,0:0,16,0:72:160,75,0,940,75,940:255,75,0:0,0:1.2178e+02,7.1784e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,9:0,0,10,15 chr1 228505700 . G . PASS END=228505702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr1 228505703 . G . PASS END=228505713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr1 228505714 . C . PASS END=228505715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:26,0 chr1 228505716 . A . PASS END=228505717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 228505718 . G . PASS END=228505719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1124:0,61,255:29,0 chr1 228505720 . A . PASS END=228505726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 228505727 . C T, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.805;ReadPosRankSum=-0.584;FractionInformativeReads=0.970;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:9,2,0:7,14,0:48:85,0,50,536,543,1079:255,0,255:16,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,13,3:6,10,3,13 chr1 228505728 . G . PASS END=228505738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:34,0 chr1 228505739 . G A, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.102;ReadPosRankSum=-0.919;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,19,0:0.528,0.000:36:3,10,0:14,9,0:48:85,0,50,643,571,1214:255,0,255:16,0:5.0000e+01,6.6527e-05,5.2753e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,10,9:5,12,7,12 chr1 228505740 . G . PASS END=228505777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1150:0,85,255:37,0 chr1 228505778 . A . PASS END=228505793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1319:0,108,255:37,0 chr1 228505794 . G . PASS END=228505795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:35,0 chr1 228505796 . T . PASS END=228505826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,99,255:36,0 chr1 228505827 . G . PASS END=228505843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:25,0 chr1 228505844 . T . PASS END=228505844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 228505845 . C . PASS END=228505854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 228505855 . T . PASS END=228505874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,47,255:19,0 chr1 228506585 . T . PASS END=228506586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,394:0,33,255:11,0 chr1 228506587 . G . PASS END=228506587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 228506588 . C . PASS END=228506602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,374:0,33,255:13,0 chr1 228506603 . C . PASS END=228506610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 228506611 . G . PASS END=228506611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 228506612 . A . PASS END=228506614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228506615 . C . PASS END=228506615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 228506616 . C . PASS END=228506640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 228506641 . G . PASS END=228506641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 228506642 . C . PASS END=228506646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 228506647 . C . PASS END=228506655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:12,0 chr1 228506656 . G . PASS END=228506708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,553:0,41,255:19,0 chr1 228506709 . G . PASS END=228506717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 228506718 . G . PASS END=228506722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 228506723 . C . PASS END=228506729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228506730 . C . PASS END=228506730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr1 228506731 . G . PASS END=228506731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228506732 . A . PASS END=228506739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 228506740 . G . PASS END=228506749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,860:0,69,255:23,0 chr1 228506750 . G . PASS END=228506750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 228506751 . C . PASS END=228506803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr1 228506804 . A . PASS END=228506805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228506806 . G . PASS END=228506807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 228506808 . C . PASS END=228506825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 228506826 . G . PASS END=228506828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228506829 . G . PASS END=228506831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228506832 . C . PASS END=228506838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr1 228506839 . G . PASS END=228506855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228506856 . A . PASS END=228506856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228506857 . C . PASS END=228506861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228506862 . C . PASS END=228506886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr1 228506887 . G . PASS END=228506887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr1 228506888 . G . PASS END=228506894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 228506895 . T . PASS END=228506895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 228506896 . T . PASS END=228506901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr1 228506902 . G . PASS END=228506921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,630:0,41,255:19,0 chr1 228506922 . T . PASS END=228506942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 228506943 . A . PASS END=228506955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:9:0,24,360:0,27,255:10,0 chr1 228509045 . G . PASS END=228509058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr1 228509059 . A . PASS END=228509059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 228509060 . G . PASS END=228509060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 228509061 . C . PASS END=228509061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 228509062 . C . PASS END=228509066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 228509067 . C . PASS END=228509078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:16,0 chr1 228509079 . A . PASS END=228509079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr1 228509080 . G . PASS END=228509081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 228509082 . A . PASS END=228509082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 228509083 . G . PASS END=228509092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:19,0 chr1 228509093 . C . PASS END=228509104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:24,0 chr1 228509105 . G . PASS END=228509105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 228509106 . T . PASS END=228509110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr1 228509111 . C . PASS END=228509111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 228509112 . C . PASS END=228509122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,856:0,61,255:25,0 chr1 228509123 . G . PASS END=228509123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 228509124 . A . PASS END=228509126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 228509127 . T . PASS END=228509127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 228509128 . G . PASS END=228509134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 228509135 . A . PASS END=228509135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 228509136 . A . PASS END=228509136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 228509137 . A . PASS END=228509137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 228509138 . G . PASS END=228509138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 228509139 . A . PASS END=228509148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr1 228509149 . T . PASS END=228509149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228509150 . C . PASS END=228509152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 228509153 . T . PASS END=228509183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1035:0,87,255:33,0 chr1 228509184 . C . PASS END=228509184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1125:0,25,255:29,0 chr1 228509185 . T . PASS END=228509195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:33,0 chr1 228509196 . G . PASS END=228509196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 228509197 . C . PASS END=228509204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:34,0 chr1 228509205 . T . PASS END=228509205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr1 228509206 . C . PASS END=228509249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1142:0,85,255:36,0 chr1 228509250 . C . PASS END=228509250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:28,0 chr1 228509251 . A . PASS END=228509309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1094:0,87,255:35,0 chr1 228509310 . G . PASS END=228509310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 228509311 . C . PASS END=228509321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228509322 . T . PASS END=228509322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 228509323 . G . PASS END=228509343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,87,255:30,0 chr1 228509344 . T . PASS END=228509345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr1 228509346 . G . PASS END=228509348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 228509349 . T . PASS END=228509370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,955:0,75,255:26,0 chr1 228509371 . C . PASS END=228509379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:30,0 chr1 228509380 . C . PASS END=228509380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr1 228509381 . G . PASS END=228509389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1141:0,90,255:31,0 chr1 228509390 . G . PASS END=228509406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 228509407 . T . PASS END=228509409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1086:0,74,255:26,0 chr1 228509410 . G . PASS END=228509410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 228509411 . C . PASS END=228509426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1030:0,68,255:25,0 chr1 228509427 . A G, 127.80 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,16,0:0,11,0:78:166,81,0,1007,81,1007:255,84,0:0,0:1.2780e+02,7.7799e+01,0.0000e+00,4.5000e+02,1.1257e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,13:0,0,13,14 chr1 228509428 . C . PASS END=228509464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:24,0 chr1 228509465 . A . PASS END=228509467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228509468 . A . PASS END=228509468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr1 228509469 . A . PASS END=228509545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,832:0,64,255:26,0 chr1 228509546 . G . PASS END=228509567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1185:0,80,255:30,0 chr1 228509568 . G . PASS END=228509568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:28,0 chr1 228509569 . G . PASS END=228509636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1059:0,85,255:35,0 chr1 228509637 . T . PASS END=228509637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:26,0 chr1 228509638 . C . PASS END=228509639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr1 228509640 . T . PASS END=228509640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 228509641 . G . PASS END=228509687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1161:0,80,255:36,0 chr1 228509688 . A . PASS END=228509688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1066:0,71,255:30,0 chr1 228509689 . G . PASS END=228509856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1210:0,86,255:37,0 chr1 228509857 . G . PASS END=228509857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 228509858 . A . PASS END=228509869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1202:0,86,255:30,0 chr1 228509870 . G . PASS END=228509902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,65,255:26,0 chr1 228509903 . A . PASS END=228509912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,747:0,52,255:19,0 chr1 228509913 . C . PASS END=228509915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 228511029 . C . PASS END=228511057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:24,0 chr1 228511058 . C . PASS END=228511060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 228511061 . G . PASS END=228511067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 228511068 . A . PASS END=228511068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 228511069 . G . PASS END=228511069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 228511070 . G . PASS END=228511071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:25:0,45,859:0,45,255:22,0 chr1 228511072 . T . PASS END=228511073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 228511074 . G . PASS END=228511270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,86,255:40,0 chr1 228511271 . G . PASS END=228511271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 228511272 . G . PASS END=228511273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:27,0 chr1 228511274 . G . PASS END=228511280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 228511281 . C . PASS END=228511288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:29,0 chr1 228511289 . G . PASS END=228511290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 228511291 . T . PASS END=228511293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228511294 . G . PASS END=228511294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 228511295 . C . PASS END=228511295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228511296 . T . PASS END=228511307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,990:0,68,255:26,0 chr1 228520561 . T . PASS END=228520639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,105,1575:0,123,255:40,0 chr1 228520900 . C . PASS END=228520905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr1 228520906 . G . PASS END=228520906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:18,0 chr1 228520907 . C . PASS END=228520907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 228520908 . A . PASS END=228520917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr1 228520918 . A . PASS END=228520918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 228520919 . G . PASS END=228520919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 228520920 . A . PASS END=228520920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 228520921 . G . PASS END=228520935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,881:0,62,255:26,0 chr1 228520936 . G . PASS END=228520945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:31,0 chr1 228520946 . C . PASS END=228520946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 228520947 . C . PASS END=228521014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1164:0,83,255:34,0 chr1 228521015 . A . PASS END=228521016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:26,0 chr1 228521017 . G . PASS END=228521020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228521021 . A . PASS END=228521021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 228521022 . A . PASS END=228521024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228521284 . G . PASS END=228521432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:42:0,83,1536:0,83,255:40,0 chr1 228521433 . A . PASS END=228521433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:37,0 chr1 228521434 . G . PASS END=228521439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1405:0,81,255:38,0 chr1 228521440 . C . PASS END=228521440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:59:40:0,59,1359:0,59,255:36,0 chr1 228521441 . C . PASS END=228521480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1057:0,86,255:36,0 chr1 228521481 . G . PASS END=228521481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 228522213 . G . PASS END=228522245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1268:0,96,255:37,0 chr1 228522516 . A . PASS END=228522614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1153:0,86,255:40,0 chr1 228522781 . G . PASS END=228522794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,961:0,75,255:25,0 chr1 228522795 . A . PASS END=228522816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1125:0,80,255:30,0 chr1 228522817 . A . PASS END=228522817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 228522818 . G . PASS END=228522823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228522824 . G . PASS END=228522824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 228522825 . A . PASS END=228522834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 228522835 . T . PASS END=228522835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 228522836 . G . PASS END=228522850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 228522851 . C . PASS END=228522856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr1 228522857 . G . PASS END=228522861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 228522862 . A . PASS END=228522870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,83,255:26,0 chr1 228522871 . C . PASS END=228522871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:20,0 chr1 228522872 . C . PASS END=228522887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,62,255:21,0 chr1 228522888 . C . PASS END=228522899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 228522900 . C . PASS END=228522900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 228522901 . T . PASS END=228522914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228522915 . C . PASS END=228522915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr1 228522916 . G . PASS END=228522917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 228522918 . C . PASS END=228522918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 228522919 . A . PASS END=228522925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228522926 . G . PASS END=228522926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr1 228522927 . G . PASS END=228522927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 228522928 . G . PASS END=228522935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr1 228522936 . A . PASS END=228522949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:10:0,24,360:0,30,255:9,0 chr1 228522950 . C . PASS END=228522950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 228522951 . A . PASS END=228522954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr1 228522955 . C . PASS END=228522955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 228522956 . T . PASS END=228522969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:8,0 chr1 228522970 . T . LowGQ END=228522970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr1 228522971 . C . PASS END=228522971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 228522972 . T . PASS END=228522972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 228522973 . G . LowGQ END=228522973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,255:12,0,255:7,0 chr1 228522974 . C . PASS END=228522974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 228522975 . T . PASS END=228522975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 228522976 . C . PASS END=228522980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr1 228522981 . A . LowGQ END=228522982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:12,0,253:6,0 chr1 228522983 . C . PASS END=228522984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 228522985 . T . PASS END=228522985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr1 228522986 . G . LowGQ END=228522986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:6,0 chr1 228522987 . C . PASS END=228522989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:9:0,10,263:0,10,255:6,0 chr1 228522990 . G . LowGQ END=228522991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,194:15,0,209:5,0 chr1 228522992 . C . PASS END=228522992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 228522993 . T . LowGQ END=228522997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,217:0,0,231:5,0 chr1 228522998 . C . PASS END=228522998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr1 228522999 . C . PASS END=228522999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:6:7:0,6,90:0,21,233:2,0 chr1 228523492 . T . PASS END=228523492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:33,0 chr1 228523493 . G . PASS END=228523552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1246:0,84,255:38,0 chr1 228523901 . G . PASS END=228523971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,137,255:40,0 chr1 228524705 . A . PASS END=228524827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,105,1543:0,110,255:40,0 chr1 228524945 . C . PASS END=228524951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:34,0 chr1 228524952 . G . PASS END=228524952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr1 228524953 . C . PASS END=228524953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:32,0 chr1 228524954 . A . PASS END=228524970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:34:0,95,1272:0,95,255:37,0 chr1 228524971 . A . PASS END=228525007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,99,1485:0,99,255:40,0 chr1 228525008 . G A, 47.57 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=0.080;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:13,10,0:13,9,0:46:82,0,50,593,901,1494:255,0,255:23,0:4.7572e+01,9.7591e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,18,11,8:17,9,6,13 chr1 228525009 . C . PASS END=228525045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,110,1504:0,110,255:40,0 chr1 228525046 . T . PASS END=228525084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1260:0,104,255:40,0 chr1 228525645 . A . PASS END=228525648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 228525649 . T . PASS END=228525650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr1 228525651 . G . PASS END=228525658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,770:0,63,255:25,0 chr1 228525659 . C . PASS END=228525659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 228525660 . G . PASS END=228525673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,917:0,72,255:26,0 chr1 228525674 . C . PASS END=228525696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,964:0,81,255:31,0 chr1 228525697 . A . PASS END=228525697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 228525698 . G . PASS END=228525709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 228525710 . G . PASS END=228525710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 228525711 . C . PASS END=228525724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 228525725 . G . PASS END=228525725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 228525726 . T . PASS END=228525757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,87,255:34,0 chr1 228525758 . G . PASS END=228525758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:30,0 chr1 228525759 . C . PASS END=228525788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,86,255:32,0 chr1 228525789 . T . PASS END=228525789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 228525790 . C . PASS END=228525791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 228525792 . A . PASS END=228525797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:22,0 chr1 228525798 . T . PASS END=228525800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,71,255:19,0 chr1 228525801 . C . PASS END=228525803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 228525804 . C . PASS END=228525806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 228525807 . G . PASS END=228525807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228525808 . G . PASS END=228525841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,682:0,44,255:19,0 chr1 228525842 . C . PASS END=228525843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 228525844 . A . PASS END=228525845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr1 228525991 . C . PASS END=228526010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1211:0,88,255:37,0 chr1 228526011 . C T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=3.229;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,21,0:0.553,0.000:38:9,11,0:8,10,0:48:85,0,49,751,608,1359:255,0,255:16,0:5.0000e+01,7.0410e-05,5.2086e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,15,6:5,12,9,12 chr1 228526012 . G . PASS END=228526048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,103,1390:0,103,255:40,0 chr1 228526049 . A . PASS END=228526073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1485:0,120,255:40,0 chr1 228526554 . C . PASS END=228526560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228526561 . A . PASS END=228526561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr1 228526562 . T . PASS END=228526565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 228526566 . G . PASS END=228526566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 228526567 . G . PASS END=228526597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:18,0 chr1 228526598 . A . PASS END=228526598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 228526599 . G . PASS END=228526603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 228526604 . T . PASS END=228526604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,590:0,10,255:16,0 chr1 228526605 . G . PASS END=228526608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr1 228526609 . T . PASS END=228526627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr1 228526628 . T . PASS END=228526641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 228526642 . C . PASS END=228526645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228526646 . G . PASS END=228526648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228526649 . C . PASS END=228526649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 228526650 . C . PASS END=228526654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:22,0 chr1 228526655 . T . PASS END=228526655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 228526656 . G . PASS END=228526664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 228526665 . T C, 46.71 PASS DP=24;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=-0.417;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:9,5,0:6,4,0:46:81,0,50,322,529,850:255,0,255:15,0:4.6707e+01,1.1442e-04,5.3000e+01,3.2195e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,3,6:8,7,7,2 chr1 228526666 . G . PASS END=228526674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 228526675 . C . PASS END=228526675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 228526676 . A . PASS END=228526684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 228526685 . T . PASS END=228526686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr1 228526687 . A . PASS END=228526688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228526689 . C . PASS END=228526695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 228526696 . A . PASS END=228526696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:17,0 chr1 228526697 . A . PASS END=228526705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr1 228526706 . A . PASS END=228526707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,619:0,27,255:13,0 chr1 228526708 . A . PASS END=228526727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:13,0 chr1 228527643 . C . PASS END=228527751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1094:0,87,255:38,0 chr1 228527752 . G . PASS END=228527756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 228527757 . G . PASS END=228527761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 228527762 . A . PASS END=228527775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:25,0 chr1 228527776 . A . PASS END=228527786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:22:0,51,765:0,59,255:19,0 chr1 228527787 . C . PASS END=228527791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228527792 . A . PASS END=228527802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 228528207 . A . PASS END=228528237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr1 228528238 . A . PASS END=228528238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228528239 . C . PASS END=228528241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr1 228528242 . C . PASS END=228528244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228528245 . T . PASS END=228528246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228528247 . A . PASS END=228528247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:12,0 chr1 228528248 . G . PASS END=228528250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228528251 . C . PASS END=228528258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 228528259 . C . PASS END=228528259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 228528260 . A . PASS END=228528320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:18,0 chr1 228528321 . A . PASS END=228528322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228528323 . G . PASS END=228528323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228528425 . G . PASS END=228528425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228528426 . A . PASS END=228528426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 228528427 . G . PASS END=228528436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:15,0 chr1 228528437 . A . PASS END=228528437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr1 228528438 . A . PASS END=228528438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 228528439 . C . PASS END=228528439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 228528440 . A . PASS END=228528440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228528441 . A . PASS END=228528441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 228528442 . G . PASS END=228528442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228528443 . G . PASS END=228528444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228528445 . G . PASS END=228528445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr1 228528446 . C . PASS END=228528446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228528447 . G . PASS END=228528447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228528448 . G . PASS END=228528451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228528452 . A . PASS END=228528452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 228528453 . G . PASS END=228528460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 228528461 . T . PASS END=228528461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 228528462 . G . PASS END=228528466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 228528467 . C . PASS END=228528467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228528468 . T . PASS END=228528468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 228528469 . G . PASS END=228528469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,759:0,22,255:21,0 chr1 228528470 . C . PASS END=228528472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228528473 . G . PASS END=228528473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr1 228528474 . A . PASS END=228528483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr1 228528484 . T . PASS END=228528484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 228528485 . G . PASS END=228528493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 228528494 . T . PASS END=228528494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:24,0 chr1 228528495 . C . PASS END=228528516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,969:0,75,255:26,0 chr1 228528517 . G . PASS END=228528523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr1 228528524 . C . PASS END=228528524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 228528525 . T . PASS END=228528525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 228528526 . G . PASS END=228528532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr1 228528533 . T . PASS END=228528533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 228528534 . C . PASS END=228528539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr1 228528540 . T . PASS END=228528540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr1 228528541 . G . PASS END=228528542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228528543 . A . PASS END=228528543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 228528544 . G . PASS END=228528547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228528548 . T . PASS END=228528562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr1 228528563 . C G, 49.72 PASS DP=26;MQ=249.59;MQRankSum=3.575;ReadPosRankSum=3.420;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:6,4,0:8,8,0:48:84,0,50,421,464,885:255,0,255:12,0:4.9725e+01,6.8081e-05,5.3000e+01,4.2122e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,6,6:4,10,6,6 chr1 228528564 . A . PASS END=228528580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr1 228528581 . A . PASS END=228528581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr1 228528582 . T . PASS END=228528586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228528587 . C . PASS END=228528589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228528796 . G . PASS END=228528807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr1 228528808 . G . PASS END=228528820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:25,0 chr1 228528821 . C . PASS END=228528830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 228528831 . C . PASS END=228528831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 228528832 . C . PASS END=228528837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 228528838 . C . PASS END=228528838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 228528839 . C . PASS END=228528845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 228528846 . G . PASS END=228528846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:28,0 chr1 228528847 . G . PASS END=228528876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1078:0,90,255:30,0 chr1 228528877 . A . PASS END=228528877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 228528878 . A . PASS END=228528888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:32,0 chr1 228528889 . A . PASS END=228528889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 228528890 . T . PASS END=228528906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1196:0,83,255:33,0 chr1 228528907 . G . PASS END=228528908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,85,255:26,0 chr1 228528909 . C . PASS END=228528915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 228528916 . A . PASS END=228528941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,902:0,64,255:26,0 chr1 228528942 . G . PASS END=228528942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,859:0,31,255:22,0 chr1 228528943 . A . PASS END=228528945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,886:0,61,255:24,0 chr1 228528946 . A . PASS END=228528946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 228528947 . T . PASS END=228528947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228528948 . G . PASS END=228528948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr1 228528949 . A . PASS END=228528949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:19,0 chr1 228528950 . T . PASS END=228528951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 228528952 . A . PASS END=228528954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228529138 . C . PASS END=228529138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 228529139 . T . PASS END=228529144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,898:0,62,255:26,0 chr1 228529145 . G . PASS END=228529166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1094:0,83,255:34,0 chr1 228529167 . G . PASS END=228529244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:36:0,91,1313:0,91,255:40,0 chr1 228529245 . A . PASS END=228529245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1404:0,68,255:37,0 chr1 228529246 . G . PASS END=228529297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1303:0,97,255:38,0 chr1 228529298 . T . PASS END=228529300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1276:0,70,255:31,1 chr1 228529301 . C . PASS END=228529309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,89,255:30,0 chr1 228529310 . T . PASS END=228529315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:24,0 chr1 228529820 . G . PASS END=228529821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 228529822 . C . PASS END=228529822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr1 228529823 . C . PASS END=228529823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 228529824 . C . PASS END=228529833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,747:0,63,255:23,0 chr1 228529834 . G . PASS END=228529834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 228529835 . A . PASS END=228529847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:24,0 chr1 228529848 . C . PASS END=228529848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr1 228529849 . G . PASS END=228529852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr1 228529853 . G . PASS END=228529853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 228529854 . C . PASS END=228529869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,870:0,62,255:24,0 chr1 228529870 . G . PASS END=228529872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 228529873 . A . PASS END=228529873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,723:0,39,255:16,0 chr1 228529874 . C . PASS END=228529909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr1 228529910 . A . PASS END=228529923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,504:0,39,255:13,0 chr1 228529924 . T . PASS END=228529924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr1 228529925 . G . PASS END=228529933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 228537591 . A . PASS END=228537611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1374:0,101,255:40,0 chr1 228537612 . A . PASS END=228537612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:39,1 chr1 228537613 . C . PASS END=228537748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:31:0,81,1097:0,82,255:40,1 chr1 228537749 . C . PASS END=228537758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 228538542 . T . PASS END=228538551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1141:0,93,255:31,0 chr1 228538552 . G . PASS END=228538552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 228538553 . T . PASS END=228538644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:32:0,90,1118:0,93,255:40,0 chr1 228539009 . G . PASS END=228539009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 228539022 . G . PASS END=228539024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr1 228539025 . G . PASS END=228539026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228539027 . A . PASS END=228539027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 228539028 . C . PASS END=228539069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1132:0,83,255:37,0 chr1 228539070 . A . PASS END=228539070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1230:0,62,255:34,0 chr1 228539071 . C . PASS END=228539095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:34:0,85,1188:0,85,255:38,0 chr1 228539096 . T . PASS END=228539096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:30,0 chr1 228539097 . A . PASS END=228539133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 228539134 . G . PASS END=228539134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1013:0,62,255:27,0 chr1 228539135 . G . PASS END=228539135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 228539136 . G . PASS END=228539137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1080:0,77,255:27,0 chr1 228539138 . T . PASS END=228539138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:23,0 chr1 228539139 . C . PASS END=228539139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr1 228539140 . T . PASS END=228539140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:22,0 chr1 228539141 . A . PASS END=228539149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:24,0 chr1 228539150 . A . PASS END=228539150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 228539151 . G . PASS END=228539151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228540652 . C . PASS END=228540660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 228540661 . C . LowGQ END=228540661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr1 228540662 . G . PASS END=228540670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr1 228540671 . C . PASS END=228540675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 228540676 . C . PASS END=228540676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 228540677 . G . PASS END=228540677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 228540678 . G . PASS END=228540705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:19,0 chr1 228540706 . C . PASS END=228540716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228540717 . G . PASS END=228540739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 228540740 . A . PASS END=228540763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 228543852 . T . PASS END=228543898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,140,255:40,0 chr1 228547298 . A . PASS END=228547305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:9,0 chr1 228547306 . C . PASS END=228547314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 228547315 . C . PASS END=228547315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 228547316 . T . PASS END=228547346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,346:0,36,255:12,0 chr1 228547347 . T . PASS END=228547347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 228547348 . C . PASS END=228547355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr1 228547356 . A . PASS END=228547356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,335:0,5,255:11,0 chr1 228547357 . A . PASS END=228547363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,376:0,36,255:13,0 chr1 228547364 . C . PASS END=228547364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 228547365 . T . PASS END=228547365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr1 228547366 . C . PASS END=228547373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,385:0,42,255:14,0 chr1 228547374 . C . PASS END=228547378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228547379 . C . PASS END=228547379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 228547380 . C . PASS END=228547382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228547383 . T . PASS END=228547383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 228547384 . G . PASS END=228547384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228547385 . C . LowGQ END=228547385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:13,0,255:12,0 chr1 228547386 . T . PASS END=228547386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228547387 . C . PASS END=228547387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 228547388 . T . PASS END=228547388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 228547389 . G . PASS END=228547397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228547398 . C . PASS END=228547408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228547409 . C . PASS END=228547414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228547415 . G . PASS END=228547416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 228547417 . C . PASS END=228547421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228547422 . G . PASS END=228547426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 228547427 . G . PASS END=228547430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228547431 . T . PASS END=228547440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228547441 . G . PASS END=228547442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 228547443 . G . PASS END=228547465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 228547466 . G . PASS END=228547470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 228547471 . A . PASS END=228547471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 228547472 . A . PASS END=228547475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228547476 . G . PASS END=228547479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228547480 . A . PASS END=228547484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228547485 . C . PASS END=228547486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228547487 . C . PASS END=228547487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 228547488 . G . PASS END=228547497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228547498 . C . PASS END=228547501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228547502 . G . PASS END=228547502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 228547503 . T . PASS END=228547504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 228547505 . T . PASS END=228547545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:18,0 chr1 228547546 . T . PASS END=228547546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 228547547 . C . PASS END=228547564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:19,0 chr1 228547565 . G . PASS END=228547566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228547567 . G . PASS END=228547595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr1 228547596 . C . PASS END=228547596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 228547597 . G . PASS END=228547612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:19,0 chr1 228547613 . C . PASS END=228547623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:23,0 chr1 228547624 . T . PASS END=228547624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:21,0 chr1 228547625 . G . PASS END=228547625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228547626 . T . PASS END=228547626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr1 228547627 . C . PASS END=228547631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 228547632 . A . PASS END=228547632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:21,0 chr1 228547633 . C . PASS END=228547660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,915:0,62,255:26,0 chr1 228547661 . G . PASS END=228547661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 228547662 . C . PASS END=228547722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,815:0,64,255:26,0 chr1 228547723 . A . PASS END=228547723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 228547724 . C . PASS END=228547729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:23,0 chr1 228547730 . G . PASS END=228547730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr1 228547731 . C . PASS END=228547749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:24,0 chr1 228547750 . C . PASS END=228547754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,810:0,59,255:20,0 chr1 228547755 . G . PASS END=228547755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:18,0 chr1 228547756 . G . PASS END=228547761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:22:0,48,720:0,66,255:19,0 chr1 228547762 . C . PASS END=228547769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 228547770 . G . PASS END=228547770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr1 228547771 . G . PASS END=228547773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228547774 . T . PASS END=228547774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 228547775 . C . PASS END=228547779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 228547780 . A . PASS END=228547780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:23,0 chr1 228547781 . G . PASS END=228547786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 228547787 . T . PASS END=228547787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 228547788 . G . PASS END=228547788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228547789 . T . PASS END=228547789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 228547790 . C . PASS END=228547803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:24:0,65,878:0,65,255:26,0 chr1 228547804 . C . PASS END=228547805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 228547806 . A . PASS END=228547822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,953:0,65,255:26,0 chr1 228547823 . G . PASS END=228547840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr1 228547841 . C . PASS END=228547842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228547843 . G . PASS END=228547845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228547846 . T . PASS END=228547846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 228547847 . G . PASS END=228547850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228547851 . G . PASS END=228547852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 228547853 . G . PASS END=228547858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 228547859 . C . PASS END=228547859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 228547860 . A . PASS END=228547972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1095:0,82,255:36,0 chr1 228547973 . C . PASS END=228547973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1210:0,58,255:31,0 chr1 228547974 . G . PASS END=228548065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1164:0,81,255:36,0 chr1 228548066 . T . PASS END=228548066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:30,0 chr1 228548067 . G . PASS END=228548075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:32,0 chr1 228548076 . T . PASS END=228548076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:5:33:0,5,948:0,5,255:25,0 chr1 228548077 . G . PASS END=228548079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 228548080 . A . PASS END=228548080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 228548081 . G . PASS END=228548082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 228548083 . T . PASS END=228548083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1065:0,62,255:26,0 chr1 228548084 . C . PASS END=228548087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 228548088 . G . PASS END=228548088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 228548089 . T . PASS END=228548102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 228548103 . A . PASS END=228548103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 228548104 . T . PASS END=228548104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:27,0 chr1 228548105 . C . PASS END=228548105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 228548106 . G . PASS END=228548113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 228548114 . C . PASS END=228548114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 228548115 . A . PASS END=228548116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228548117 . G . PASS END=228548117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 228548118 . G . PASS END=228548123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 228548124 . C . PASS END=228548124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 228548125 . A . PASS END=228548126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228548127 . C . PASS END=228548159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr1 228548160 . C . PASS END=228548164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 228548165 . A . PASS END=228548196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,53,255:19,0 chr1 228548197 . G A, 48.97 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=1.032;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:7,4,0:4,4,0:48:84,0,50,286,393,679:253,0,255:10,0:4.8967e+01,7.6882e-05,5.3000e+01,2.8599e+02,4.2804e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,3,5:6,5,5,3 chr1 228548198 . T . PASS END=228548203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr1 228548204 . G . PASS END=228548204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:18,0 chr1 228548205 . T . PASS END=228548224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,729:0,57,255:19,0 chr1 228548225 . C . PASS END=228548228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228548229 . A . PASS END=228548230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228548231 . C . PASS END=228548234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228548235 . G . PASS END=228548241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 228548242 . C . PASS END=228548259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,693:0,63,255:21,0 chr1 228548260 . A . PASS END=228548268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 228548269 . C . PASS END=228548277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 228548278 . T . PASS END=228548278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 228548279 . G . PASS END=228548299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,709:0,60,255:24,0 chr1 228548300 . G . PASS END=228548302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,815:0,56,255:21,0 chr1 228548303 . T . PASS END=228548306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 228548307 . T . PASS END=228548307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 228548308 . G . PASS END=228548381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:25,0 chr1 228548382 . T . PASS END=228548382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 228548383 . T . PASS END=228548413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 228548414 . C . PASS END=228548429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr1 228548430 . G . PASS END=228548430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:15,0 chr1 228548431 . A . PASS END=228548456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,43,255:17,0 chr1 228548678 . T . PASS END=228548700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:40:0,110,1490:0,110,255:40,0 chr1 228549148 . A . PASS END=228549186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr1 228549187 . T . PASS END=228549187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 228549188 . T . PASS END=228549188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 228549189 . C . PASS END=228549193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:21,0 chr1 228549194 . T . PASS END=228549194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 228549195 . A . PASS END=228549201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 228549202 . G . PASS END=228549202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 228549203 . T . PASS END=228549258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,807:0,66,255:22,0 chr1 228549259 . G . PASS END=228549259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 228549260 . G . PASS END=228549261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228549262 . G . PASS END=228549262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 228549263 . A . PASS END=228549266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr1 228549267 . G . PASS END=228549273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 228549274 . C . PASS END=228549364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,732:0,61,255:25,0 chr1 228549365 . C . PASS END=228549368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr1 228549369 . C . PASS END=228549371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 228549372 . G . PASS END=228549398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:23,0 chr1 228549399 . G . PASS END=228549399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 228549400 . C . PASS END=228549408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr1 228549409 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.128;ReadPosRankSum=3.031;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:8,5,0:4,7,0:48:85,0,50,429,420,850:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,4.2924e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,6,6:6,6,7,5 chr1 228549410 . A . PASS END=228549410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 228549411 . G . PASS END=228549434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 228549435 . G . PASS END=228549467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:18,0 chr1 228549468 . T A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.366;ReadPosRankSum=3.366;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,8,0:0.533,0.000:15:3,3,0:4,5,0:48:85,0,50,286,250,536:255,0,226:7,0:5.0000e+01,6.6010e-05,5.2856e+01,2.8614e+02,2.8510e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,3,5:5,2,8,0 chr1 228549469 . G . PASS END=228549484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 228549485 . T . PASS END=228549488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228549489 . G . PASS END=228549499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 228549500 . C . PASS END=228549505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 228549506 . G . PASS END=228549508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 228549871 . C . PASS END=228549872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228549873 . T . PASS END=228549875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:22:11:0,22,405:0,22,255:10,0 chr1 228549876 . C . PASS END=228549881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 228549882 . G . PASS END=228549900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,411:0,33,255:12,0 chr1 228549901 . A . PASS END=228549901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 228549902 . G . PASS END=228549913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:13,0 chr1 228549914 . G . PASS END=228549916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,529:0,48,255:16,0 chr1 228549917 . G . PASS END=228549953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,529:0,48,255:17,0 chr1 228549954 . T C, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.266;ReadPosRankSum=1.859;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,11,0:0.647,0.000:17:3,6,0:3,5,0:47:85,0,47,393,215,608:255,0,181:5,0:5.0000e+01,8.9308e-05,4.9758e+01,3.9341e+02,2.4937e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,8,3:3,3,9,2 chr1 228549955 . G . PASS END=228549973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr1 228549974 . C . PASS END=228549974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228549975 . T . PASS END=228549990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 228549991 . C . PASS END=228549991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228549992 . A . PASS END=228550005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 228550006 . T . PASS END=228550009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 228550010 . G . PASS END=228550014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228550015 . G . PASS END=228550065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,47,255:19,0 chr1 228550066 . G . PASS END=228550067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 228550068 . A . PASS END=228550102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:19,0 chr1 228550103 . C . PASS END=228550103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr1 228550104 . C . PASS END=228550116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 228550117 . C . PASS END=228550123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:13,0 chr1 228550277 . A . PASS END=228550277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 228550278 . C . PASS END=228550278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 228550279 . A . PASS END=228550340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:22:0,61,800:0,61,255:26,0 chr1 228550341 . G . PASS END=228550342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 228550343 . C . PASS END=228550343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 228550344 . G . PASS END=228550344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 228550345 . C . PASS END=228550345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 228550346 . C . PASS END=228550349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:26,0 chr1 228550350 . C . PASS END=228550350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 228550351 . C . PASS END=228550351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 228550352 . C . PASS END=228550368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1149:0,82,255:31,0 chr1 228550369 . A . PASS END=228550369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 228550370 . C . PASS END=228550385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1141:0,82,255:31,0 chr1 228550386 . C . PASS END=228550386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr1 228550387 . C . PASS END=228550388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:31,0 chr1 228550389 . C . PASS END=228550417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:33,0 chr1 228550418 . G . PASS END=228550425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:65:27:0,65,961:0,65,255:26,0 chr1 228550426 . C T, 49.06 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.562;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:8,8,0:7,4,0:48:84,0,50,371,536,908:255,0,255:13,0:4.9059e+01,7.5588e-05,5.3000e+01,3.7130e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,7,5:10,5,7,5 chr1 228550427 . C . PASS END=228550431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr1 228550432 . G . PASS END=228550432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 228550433 . T . PASS END=228550435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 228550436 . C . PASS END=228550456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 228550625 . C . PASS END=228550649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,99,1511:0,99,255:40,0 chr1 228550650 . T A, 50.00 PASS DP=47;MQ=248.12;MQRankSum=5.863;ReadPosRankSum=2.288;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,24,0:0.511,0.000:47:15,15,0:8,9,0:48:85,0,50,732,815,1547:255,0,255:22,0:5.0000e+01,6.4974e-05,5.3024e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,10,14:10,13,11,13 chr1 228552604 . G . PASS END=228552608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr1 228552609 . C . PASS END=228552615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr1 228552616 . C . PASS END=228552620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 228552621 . C . PASS END=228552632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,706:0,57,255:19,0 chr1 228552679 . C . PASS END=228552730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 228552731 . G . PASS END=228552731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 228552732 . G . PASS END=228552754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,662:0,57,255:19,0 chr1 228552755 . C . PASS END=228552762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr1 228552763 . G . PASS END=228552765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 228552766 . C . PASS END=228552778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228553137 . G . PASS END=228553138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 228553139 . T . PASS END=228553140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 228553141 . G . PASS END=228553142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:19,0 chr1 228553143 . G . PASS END=228553144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 228553145 . G . PASS END=228553145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 228553146 . T . PASS END=228553148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 228553149 . A . PASS END=228553149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr1 228553150 . G . PASS END=228553151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 228553152 . C . PASS END=228553152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 228553153 . T . PASS END=228553153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 228553154 . G . PASS END=228553154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 228553155 . G . PASS END=228553155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 228553156 . C . PASS END=228553156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 228553157 . C . PASS END=228553157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 228553158 . C . PASS END=228553158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 228553159 . G . PASS END=228553159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 228553160 . G . PASS END=228553160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 228553161 . G . PASS END=228553162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr1 228553163 . C . PASS END=228553163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 228553164 . A . PASS END=228553165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 228553166 . G . PASS END=228553166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr1 228553167 . C . PASS END=228553167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 228553168 . A . PASS END=228553171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr1 228553172 . G . PASS END=228553172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 228553173 . G . PASS END=228553180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:29,0 chr1 228553181 . T . PASS END=228553181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr1 228553182 . C . PASS END=228553198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 228553199 . A . PASS END=228553199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 228553200 . C . PASS END=228553200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 228553201 . G . PASS END=228553202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 228553203 . G . PASS END=228553223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1172:0,93,255:31,0 chr1 228553224 . G . PASS END=228553261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,908:0,61,255:26,0 chr1 228553401 . C . PASS END=228553474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1139:0,80,255:34,0 chr1 228553475 . C . PASS END=228553475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 228553476 . T . PASS END=228553480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,67,255:23,0 chr1 228553775 . G . PASS END=228553806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,66,255:26,0 chr1 228553807 . G . PASS END=228553808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 228553809 . G . PASS END=228553811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 228553812 . G . PASS END=228553820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:29,0 chr1 228553821 . A . PASS END=228553821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 228553822 . G . PASS END=228553833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1164:0,90,255:31,0 chr1 228553834 . C . PASS END=228553834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr1 228553835 . A . PASS END=228553862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1116:0,87,255:32,0 chr1 228553863 . A . PASS END=228553887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 228554101 . G . PASS END=228554112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,962:0,78,255:26,0 chr1 228554113 . C . PASS END=228554160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1084:0,82,255:33,0 chr1 228554161 . T . PASS END=228554161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:28,0 chr1 228554162 . C . PASS END=228554177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1202:0,86,255:31,0 chr1 228554178 . T . PASS END=228554178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 228554179 . G . PASS END=228554182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 228554183 . C . PASS END=228554183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 228554184 . C . PASS END=228554187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228554188 . A . PASS END=228554208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,994:0,70,255:26,0 chr1 228554209 . T . PASS END=228554209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,856:0,42,255:25,0 chr1 228554210 . G . PASS END=228554228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,930:0,62,255:25,0 chr1 228554229 . T . PASS END=228554229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr1 228554230 . G . PASS END=228554234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr1 228554235 . G . PASS END=228554235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 228554236 . G . PASS END=228554236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228554237 . T . PASS END=228554237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 228554238 . G . PASS END=228554257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr1 228554258 . T . PASS END=228554269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,50,255:18,0 chr1 228554386 . C . PASS END=228554400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 228554401 . T . PASS END=228554421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:25,0 chr1 228554422 . A . PASS END=228554422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 228554423 . G . PASS END=228554425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr1 228554426 . G . PASS END=228554426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 228554427 . C . PASS END=228554428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 228554429 . C . PASS END=228554432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr1 228554433 . T . PASS END=228554433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 228554434 . C . PASS END=228554440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1011:0,87,255:29,0 chr1 228554441 . A . PASS END=228554441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 228554442 . C . PASS END=228554503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1111:0,87,255:34,0 chr1 228554509 . G . PASS END=228554525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:32,0 chr1 228554526 . T . PASS END=228554526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 228554527 . C . PASS END=228554548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1288:0,102,255:34,0 chr1 228554549 . G . PASS END=228554551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 228554552 . G . PASS END=228554560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr1 228554561 . C . PASS END=228554582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:24:0,64,864:0,64,255:26,0 chr1 228554583 . A . PASS END=228554583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr1 228554584 . T . PASS END=228554589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr1 228554590 . G . PASS END=228554590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 228554676 . G . PASS END=228554876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1242:0,84,255:40,0 chr1 228555503 . C . PASS END=228555647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:91:42:0,91,1574:0,91,255:40,0 chr1 228556040 . G . PASS END=228556087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,612:0,48,255:19,0 chr1 228556088 . A . PASS END=228556088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 228556089 . G . PASS END=228556094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 228556095 . G . PASS END=228556103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 228556104 . A . PASS END=228556104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 228556105 . C . PASS END=228556105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228556106 . C . PASS END=228556117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 228556423 . C . PASS END=228556440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,120,1800:0,126,255:40,0 chr1 228556441 . G . PASS END=228556595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:33:0,93,1395:0,98,255:40,0 chr1 228556788 . C T, 49.11 PASS DP=60;MQ=250.00;MQRankSum=6.612;ReadPosRankSum=5.275;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,27,0:0.450,0.000:60:15,14,0:18,13,0:48:84,0,50,904,1115,2019:255,0,255:32,0:4.9112e+01,7.5070e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,15,17,10:14,19,12,15 chr1 228556789 . T . PASS END=228556825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,164,255:40,0 chr1 228556826 . T . PASS END=228556863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,215,255:40,0 chr1 228557643 . C . PASS END=228557645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 228557646 . G . PASS END=228557715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,751:0,60,255:26,0 chr1 228557716 . T . PASS END=228557718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228557719 . T . PASS END=228557731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,992:0,68,255:26,0 chr1 228557732 . T . PASS END=228557732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:22,0 chr1 228557733 . G . PASS END=228557747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 228557748 . C . PASS END=228557748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 228557749 . G . PASS END=228557749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228557750 . A . PASS END=228557750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 228557751 . A . PASS END=228557757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,740:0,69,255:23,0 chr1 228557758 . A . PASS END=228557758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 228557759 . A . PASS END=228557767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr1 228557768 . T . PASS END=228557768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228557769 . C . PASS END=228557773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228557774 . C . PASS END=228557794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,584:0,40,255:19,0 chr1 228557795 . A . PASS END=228557795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 228557894 . G . PASS END=228557899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 228557900 . G . PASS END=228557902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228557903 . T . PASS END=228557919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,930:0,62,255:25,0 chr1 228557920 . T . PASS END=228557920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:23,0 chr1 228557921 . C . PASS END=228557928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:25,0 chr1 228557929 . C . PASS END=228557929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 228557930 . C . PASS END=228557930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 228557931 . T . PASS END=228557932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:22,0 chr1 228557933 . G . PASS END=228557939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 228558380 . A . PASS END=228558457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,129,255:40,0 chr1 228558724 . C . PASS END=228558726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 228558727 . T . PASS END=228558743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr1 228558744 . G . PASS END=228558744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 228558745 . T . PASS END=228558754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 228558755 . T . PASS END=228558755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 228558756 . G . PASS END=228558842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:26,0 chr1 228558843 . C . PASS END=228558843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,662:0,25,255:18,0 chr1 228558844 . T . PASS END=228558846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,848:0,61,255:22,0 chr1 228558847 . T . PASS END=228558847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:21,0 chr1 228558848 . C . PASS END=228558851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,825:0,61,255:21,0 chr1 228558852 . T . PASS END=228558852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,746:0,33,255:19,1 chr1 228558853 . T . PASS END=228558853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:24:25:0,24,816:0,24,255:19,1 chr1 228558854 . C . LowGQ END=228558855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:24:0,0,596:0,0,255:18,1 chr1 228558856 . T . PASS END=228558856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 228558857 . C . PASS END=228558858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228558859 . T . PASS END=228558859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 228558860 . C . PASS END=228558860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228558861 . C . PASS END=228558862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,798:0,50,255:21,0 chr1 228558863 . C . PASS END=228558864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 228558865 . T . PASS END=228558865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 228558866 . C . PASS END=228558867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228558868 . G . PASS END=228558869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 228558870 . C . PASS END=228558871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228558872 . A . PASS END=228558872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 228558873 . C . PASS END=228558873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228558874 . G . PASS END=228558874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 228558875 . A . PASS END=228558877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 228558878 . T . PASS END=228558889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,751:0,50,255:19,0 chr1 228558890 . C . PASS END=228558892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 228558893 . G . PASS END=228558893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 228558894 . G . PASS END=228558896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228558897 . T . PASS END=228558897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 228558898 . A . PASS END=228558901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228558902 . C . PASS END=228558902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 228558903 . A . PASS END=228558910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 228558911 . C . PASS END=228558912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 228558913 . T . PASS END=228558921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 228558922 . A . PASS END=228558924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228558925 . C . PASS END=228558925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228558926 . A . PASS END=228558926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:17,0 chr1 228558927 . C . PASS END=228558935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr1 228558936 . G . PASS END=228558936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:18,0 chr1 228558937 . C . PASS END=228558941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr1 228558942 . C . PASS END=228558966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,752:0,63,255:24,0 chr1 228558967 . G . PASS END=228558967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr1 228558968 . C . PASS END=228558970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 228558971 . G . PASS END=228558971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,783:0,25,255:19,0 chr1 228558972 . C . PASS END=228558990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 228558991 . G . PASS END=228558991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 228558992 . C . PASS END=228559018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,876:0,66,255:25,0 chr1 228559019 . C . PASS END=228559019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 228559020 . T . PASS END=228559025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228559026 . T . PASS END=228559026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr1 228559027 . G . PASS END=228559029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 228559030 . T . PASS END=228559072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,637:0,41,255:19,0 chr1 228559073 . C . PASS END=228559073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228559074 . C . PASS END=228559107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 228559108 . C . PASS END=228559110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:16:0,34,566:0,34,255:13,0 chr1 228559111 . G . PASS END=228559119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 228559120 . A . PASS END=228559120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 228559121 . G . PASS END=228559127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,584:0,48,255:17,0 chr1 228559128 . G . PASS END=228559128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 228559129 . C . PASS END=228559131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 228559132 . G . PASS END=228559133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 228559134 . G . PASS END=228559143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 228559144 . C . PASS END=228559144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 228559145 . C . PASS END=228559159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 228559160 . A . PASS END=228559160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 228559161 . C . PASS END=228559164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 228559165 . G . PASS END=228559165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 228559166 . C . PASS END=228559185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:17,0 chr1 228559186 . A . PASS END=228559186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr1 228559187 . A . PASS END=228559189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 228559190 . G . PASS END=228559190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 228559191 . C . PASS END=228559192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 228559193 . G . PASS END=228559193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 228559194 . G . PASS END=228559208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr1 228559209 . G . PASS END=228559258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr1 228559259 . A . PASS END=228559259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 228559260 . G . PASS END=228559264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr1 228559265 . C . PASS END=228559278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr1 228559279 . G . PASS END=228559281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 228559282 . A . PASS END=228559294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr1 228559295 . A . PASS END=228559295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 228559296 . A . PASS END=228559344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr1 228559345 . T . PASS END=228559368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,202:6,0 chr1 228559369 . C . PASS END=228559380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 228559381 . T . PASS END=228559403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 228559404 . C . PASS END=228559443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 228559444 . C . PASS END=228559445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr1 228559446 . C . PASS END=228559446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 228559447 . T . PASS END=228559459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr1 228559460 . C . PASS END=228559517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:9,0 chr1 228559518 . C . PASS END=228559542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr1 228559543 . C . PASS END=228559596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 228559597 . G . PASS END=228559597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 228559598 . G . PASS END=228559616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 228559617 . C . PASS END=228559625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr1 228559626 . C . PASS END=228559644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 228559645 . T . PASS END=228559645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 228559646 . G . PASS END=228559663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr1 228559664 . C . PASS END=228559664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228559665 . T . PASS END=228559665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 228559666 . C . PASS END=228559689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,329:0,33,255:12,0 chr1 228559690 . T . PASS END=228559690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 228559691 . T . PASS END=228559705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 228559706 . C . PASS END=228559707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 228559708 . T . PASS END=228559708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 228559709 . T . PASS END=228559712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 228559713 . G . PASS END=228559713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 228559714 . G . PASS END=228559715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 228559716 . A . PASS END=228559716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 228559717 . C . PASS END=228559726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr1 228559727 . C . PASS END=228559728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 228559729 . C . PASS END=228559731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228559732 . C . PASS END=228559732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 228559733 . C . PASS END=228559733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228559734 . T . PASS END=228559734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 228559735 . G . PASS END=228559740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228559741 . G . PASS END=228559741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 228559742 . C . PASS END=228559742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 228559743 . C . PASS END=228559743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 228559744 . A . PASS END=228559744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 228559745 . A . PASS END=228559747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr1 228559748 . C . PASS END=228559748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 228559749 . A . PASS END=228559749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 228559750 . A . PASS END=228559751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 228559752 . C . PASS END=228559752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 228559753 . C . PASS END=228559753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 228559754 . C . PASS END=228559758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 228559759 . T . PASS END=228559764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 228559765 . T . PASS END=228559765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 228559766 . C . PASS END=228559789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:11,0 chr1 228559790 . C . PASS END=228559790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 228559791 . T . PASS END=228559802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 228559803 . G . PASS END=228559803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 228559804 . C . PASS END=228559839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr1 228559840 . T . PASS END=228559847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr1 228559848 . G . PASS END=228559852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228559853 . C . PASS END=228559883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,550:0,45,255:18,0 chr1 228559884 . C . PASS END=228559884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 228559885 . T . PASS END=228559886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,644:0,54,255:19,0 chr1 228559887 . C . PASS END=228559892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 228559893 . G . PASS END=228559895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228559896 . C . PASS END=228559898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228559899 . A . PASS END=228559900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 228559901 . A . PASS END=228559914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 228559915 . C . PASS END=228559917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228559918 . G . PASS END=228559925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 228559926 . G . PASS END=228559926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr1 228559927 . G . PASS END=228559956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,869:0,66,255:23,0 chr1 228559957 . G . PASS END=228559993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:24,0 chr1 228559994 . C T, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,11,0:0,10,0:60:148,63,0,806,63,806:255,63,0:0,0:1.1020e+02,6.0201e+01,4.1418e-06,4.5000e+02,9.4971e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,12:0,0,11,10 chr1 228559995 . G . PASS END=228560031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,773:0,63,255:25,0 chr1 228560032 . T . PASS END=228560032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 228560033 . A . PASS END=228560035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:21,0 chr1 228560036 . C . PASS END=228560037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:26:0,57,855:0,78,255:19,0 chr1 228560038 . G . PASS END=228560083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:26,0 chr1 228560084 . G . PASS END=228560086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228560087 . T . PASS END=228560101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1000:0,68,255:26,0 chr1 228560102 . C . PASS END=228560103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 228560104 . A . PASS END=228560105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228560106 . G . PASS END=228560113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 228560114 . G . PASS END=228560115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228560116 . A . PASS END=228560117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228560118 . A . PASS END=228560128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1080:0,87,255:31,0 chr1 228560129 . T . PASS END=228560129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr1 228560130 . G . PASS END=228560138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1154:0,93,255:31,0 chr1 228560139 . A G, 140.30 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,15,0:0,16,0:90:178,93,0,1202,93,1202:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,10:0,0,15,16 chr1 228560140 . G . PASS END=228560150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 228560151 . G . PASS END=228560151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 228560152 . C . PASS END=228560176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1217:0,89,255:34,0 chr1 228560177 . A . PASS END=228560209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,86,255:31,0 chr1 228560210 . G . PASS END=228560217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 228560218 . C . PASS END=228560219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228560220 . C . PASS END=228560235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 228560236 . C . PASS END=228560236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 228560237 . C . PASS END=228560239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr1 228560240 . T . PASS END=228560241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 228560242 . C . PASS END=228560262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 228560263 . A . PASS END=228560266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 228560267 . G . PASS END=228560280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:26,0 chr1 228560281 . C . PASS END=228560282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1070:0,80,255:28,0 chr1 228560283 . C . PASS END=228560284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228560285 . C . PASS END=228560285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228560286 . C . PASS END=228560296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 228560297 . A . PASS END=228560298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228560299 . A . PASS END=228560321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,68,255:26,0 chr1 228560322 . G . PASS END=228560322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 228560323 . A . PASS END=228560358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:24,0 chr1 228560359 . A . PASS END=228560359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 228560360 . C . PASS END=228560389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr1 228560390 . C . PASS END=228560391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 228560392 . G . PASS END=228560419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,61,255:26,0 chr1 228560420 . A . PASS END=228560434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:17:0,45,645:0,51,255:18,0 chr1 228560435 . C . PASS END=228560436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 228560437 . T . PASS END=228560494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,526:0,40,255:18,0 chr1 228560495 . C . PASS END=228560495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 228560496 . C . PASS END=228560496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228560497 . A . PASS END=228560498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr1 228560499 . G . PASS END=228560520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,592:0,41,255:18,0 chr1 228560521 . T . PASS END=228560521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr1 228560522 . T . PASS END=228560534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr1 228560535 . G . PASS END=228560535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 228560536 . T . PASS END=228560537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228560538 . G . PASS END=228560538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 228560539 . C . PASS END=228560554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:17,0 chr1 228560555 . T . PASS END=228560560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228560561 . C . PASS END=228560567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr1 228560568 . A . PASS END=228560568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 228560569 . G . PASS END=228560657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,592:0,41,255:19,0 chr1 228560658 . A . PASS END=228560662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 228560663 . G . PASS END=228560665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 228560666 . T . PASS END=228560666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,636:0,43,255:19,0 chr1 228560667 . C . PASS END=228560698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr1 228560699 . A . PASS END=228560699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228560700 . T C, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,9,0:0,13,0:63:151,66,0,845,66,845:255,66,0:0,0:1.1321e+02,6.3211e+01,2.0709e-06,4.5000e+02,9.7981e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,11:0,0,10,12 chr1 228560701 . G . PASS END=228560712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr1 228560713 . C . PASS END=228560714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228560715 . G . PASS END=228560715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 228560716 . G . PASS END=228560718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 228560719 . C . PASS END=228560737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr1 228560738 . C . PASS END=228560745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:17,0 chr1 228560746 . G . PASS END=228560747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228560748 . G . PASS END=228560748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 228560749 . C . PASS END=228560777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 228560778 . G . PASS END=228560778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 228560779 . G . PASS END=228560782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 228561633 . G . PASS END=228561640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,789:0,75,255:26,0 chr1 228561641 . A . PASS END=228561641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,854:0,47,255:25,0 chr1 228561642 . A . PASS END=228561671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 228561672 . T . PASS END=228561672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 228561673 . T . PASS END=228561707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,792:0,62,255:26,0 chr1 228561708 . A . PASS END=228561713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 228562015 . C . PASS END=228562021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr1 228562022 . A . PASS END=228562022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228562023 . T . PASS END=228562024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 228562025 . C . PASS END=228562026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 228562027 . T . PASS END=228562027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228562028 . A . PASS END=228562028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:14,0 chr1 228562029 . A . PASS END=228562029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228562030 . G . PASS END=228562030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 228562031 . G . PASS END=228562066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr1 228562067 . A . PASS END=228562067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 228562068 . G . PASS END=228562075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 228562076 . G . PASS END=228562076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 228562077 . G . PASS END=228562084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228562085 . G . PASS END=228562085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr1 228562086 . G . PASS END=228562086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 228562087 . T . PASS END=228562087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,398:0,11,255:13,0 chr1 228562088 . G . PASS END=228562088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 228562089 . T . PASS END=228562091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 228562092 . G . PASS END=228562092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,519:0,9,255:13,0 chr1 228562093 . C . PASS END=228562110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 228562111 . C . PASS END=228562112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228562113 . A . PASS END=228562113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr1 228562114 . C . PASS END=228562117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228562118 . G . PASS END=228562125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 228562286 . A . PASS END=228562288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 228562289 . G . PASS END=228562297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228562298 . T . PASS END=228562298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 228562299 . G . PASS END=228562384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1065:0,80,255:34,0 chr1 228562385 . G . PASS END=228562393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,83,255:26,0 chr1 228562394 . C . PASS END=228562395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 228562396 . T . PASS END=228562411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr1 228562412 . C . PASS END=228562412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 228562413 . G . PASS END=228562423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 228562424 . T . PASS END=228562424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 228562425 . G . PASS END=228562427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 228562428 . C . PASS END=228562438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 228562439 . T . PASS END=228562439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr1 228562440 . C . PASS END=228562453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,706:0,57,255:19,0 chr1 228563403 . A . PASS END=228563407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 228563408 . C . PASS END=228563408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 228563409 . C . PASS END=228563413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,879:0,78,255:26,0 chr1 228563414 . T . PASS END=228563414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr1 228563415 . C . PASS END=228563424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr1 228563425 . C . PASS END=228563425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228563426 . C . PASS END=228563426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 228563427 . C . PASS END=228563429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 228563430 . A . PASS END=228563430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 228563431 . T . PASS END=228563436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr1 228563437 . G . PASS END=228563437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 228563438 . G . PASS END=228563481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1332:0,92,255:37,0 chr1 228563482 . A . PASS END=228563482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:32,0 chr1 228563483 . T . PASS END=228563509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:34,0 chr1 228563510 . C . PASS END=228563510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr1 228563511 . A . PASS END=228563522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1123:0,80,255:29,0 chr1 228563523 . A . PASS END=228563525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:24,0 chr1 228563709 . G . PASS END=228563717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,909:0,75,255:26,0 chr1 228563718 . G . PASS END=228563738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1013:0,87,255:35,0 chr1 228563739 . T . PASS END=228563739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:32,0 chr1 228563740 . C . PASS END=228563799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:36:0,81,1358:0,81,255:40,0 chr1 228563800 . G . PASS END=228563800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:33,0 chr1 228563801 . G . PASS END=228563823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,96,255:35,0 chr1 228563824 . G . PASS END=228563824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228563825 . G . PASS END=228563825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 228563826 . G . PASS END=228563861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,808:0,66,255:24,0 chr1 228563862 . G . PASS END=228563874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 228563875 . C . PASS END=228563879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228564348 . A . PASS END=228564354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:24,0 chr1 228564355 . G . PASS END=228564355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 228564356 . G . PASS END=228564365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,858:0,75,255:25,0 chr1 228564366 . T . PASS END=228564366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr1 228564367 . G . PASS END=228564373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr1 228564374 . C . PASS END=228564375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 228564376 . T . PASS END=228564376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 228564377 . A . PASS END=228564378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 228564379 . C . PASS END=228564394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:24,0 chr1 228564395 . T . PASS END=228564395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 228564396 . C . PASS END=228564397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 228564398 . A . PASS END=228564398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,657:0,41,255:20,0 chr1 228564399 . G . PASS END=228564399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 228564494 . C . PASS END=228564494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228564495 . C . PASS END=228564575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,887:0,61,255:26,0 chr1 228564753 . G . PASS END=228564759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:23,0 chr1 228564760 . T . PASS END=228564760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 228564761 . T . PASS END=228564769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 228564770 . T . PASS END=228564770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 228564771 . G . PASS END=228564775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 228564776 . A . PASS END=228564776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 228564777 . A . PASS END=228564813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 228564814 . A . PASS END=228564814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 228564815 . A . PASS END=228564828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,989:0,81,255:29,0 chr1 228564829 . C . PASS END=228564830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 228564831 . C . PASS END=228564835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228564836 . A . PASS END=228564836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:27,0 chr1 228564837 . G . PASS END=228564837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228564838 . G . PASS END=228564841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 228564842 . A . PASS END=228564842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228564843 . G . PASS END=228564844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228564845 . C . PASS END=228564845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228564846 . A . PASS END=228564846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:25,0 chr1 228564847 . G . PASS END=228564883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 228564884 . G A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=0.975;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,16,0:0.615,0.000:26:2,9,0:8,7,0:45:85,0,43,185,185,185:255,0,255:9,0:5.0000e+01,1.4678e-04,4.6239e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,5,8,8:7,3,7,9 chr1 228564885 . C . PASS END=228564887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:24,0 chr1 228564888 . C . PASS END=228564888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:22,0 chr1 228564889 . C . PASS END=228564900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr1 228564901 . C . PASS END=228564901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 228564902 . A . PASS END=228564921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:25,0 chr1 228564922 . A . PASS END=228564924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,953:0,75,255:25,0 chr1 228564925 . C . PASS END=228564925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 228564926 . C . PASS END=228564927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 228564928 . C . PASS END=228564928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 228564929 . G . PASS END=228564941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 228564942 . C . PASS END=228564946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr1 228564947 . T . PASS END=228564947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr1 228564948 . G . PASS END=228564948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 228564949 . G . PASS END=228564982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:25,0 chr1 228564983 . T . PASS END=228564992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 228565190 . G . PASS END=228565192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228565193 . C . PASS END=228565356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1129:0,80,255:38,0 chr1 228565357 . T . PASS END=228565357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 228565358 . C . PASS END=228565386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:34:0,84,1144:0,88,255:35,0 chr1 228565387 . A . PASS END=228565407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,901:0,62,255:26,0 chr1 228565408 . C . PASS END=228565410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,922:0,62,255:23,0 chr1 228565411 . T . PASS END=228565412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,780:0,58,255:21,0 chr1 228565413 . G . PASS END=228565413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 228565632 . C . PASS END=228565652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,576:0,51,255:17,0 chr1 228565653 . A . PASS END=228565653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr1 228565654 . G . PASS END=228565695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,605:0,41,255:19,0 chr1 228565696 . A . PASS END=228565696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,559:0,10,255:16,0 chr1 228565697 . G . PASS END=228565697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 228565698 . C . PASS END=228565705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:17,0 chr1 228565706 . A . PASS END=228565706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 228565707 . T . PASS END=228565707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 228565972 . G . PASS END=228565981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 228565982 . G . PASS END=228565982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 228565983 . A . PASS END=228565983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228565984 . G . PASS END=228565985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 228565986 . A . PASS END=228565986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 228565987 . C . PASS END=228565987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr1 228565988 . C . PASS END=228565990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr1 228565991 . G . PASS END=228565992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 228565993 . G . PASS END=228565993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 228565994 . A . PASS END=228566007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:22,0 chr1 228566008 . A . PASS END=228566008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:21,0 chr1 228566009 . C . PASS END=228566011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:23,0 chr1 228566012 . G . PASS END=228566012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 228566013 . A . PASS END=228566016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:26,0 chr1 228566017 . G . PASS END=228566031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:28,0 chr1 228566032 . C . PASS END=228566042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 228566043 . T . PASS END=228566043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr1 228566044 . C . PASS END=228566068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 228566069 . C . PASS END=228566105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,584:0,40,255:19,0 chr1 228566106 . T . PASS END=228566107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:14,0 chr1 228566108 . T . PASS END=228566108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 228566109 . G . PASS END=228566109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr1 228566110 . C . PASS END=228566111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 228566112 . C . PASS END=228566116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:16:0,37,585:0,37,255:13,0 chr1 228566117 . C . PASS END=228566118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228566119 . C . PASS END=228566121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228566319 . G . PASS END=228566346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr1 228566347 . C . PASS END=228566351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228566352 . C . PASS END=228566355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228566356 . T . PASS END=228566356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228566357 . G . PASS END=228566362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 228566363 . C . PASS END=228566363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 228566364 . A . PASS END=228566364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:22,0 chr1 228566365 . G . PASS END=228566365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 228566366 . A . PASS END=228566366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:21,0 chr1 228566367 . G . PASS END=228566369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,798:0,30,255:21,0 chr1 228566370 . G . PASS END=228566382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 228566383 . T . PASS END=228566383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr1 228566384 . C . PASS END=228566384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228566385 . G . PASS END=228566385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 228566386 . C . PASS END=228566397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 228566398 . G . PASS END=228566398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 228566399 . T . PASS END=228566402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 228566403 . C . PASS END=228566410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228566411 . C . PASS END=228566415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr1 228566416 . C . PASS END=228566416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 228566417 . G . PASS END=228566421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 228566422 . C . PASS END=228566439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr1 228566440 . C . PASS END=228566451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:37:15:0,37,585:0,37,255:15,0 chr1 228566452 . C . PASS END=228566457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr1 228566458 . C . PASS END=228566467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 228566468 . A . PASS END=228566484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 228566485 . C . PASS END=228566496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:6,0 chr1 228582406 . T . PASS END=228582432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:26,0 chr1 228582433 . C . PASS END=228582477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,987:0,84,255:30,0 chr1 228582478 . C . PASS END=228582479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr1 228582480 . G . PASS END=228582489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1141:0,80,255:28,0 chr1 228582490 . G . PASS END=228582520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,950:0,70,255:26,0 chr1 228582521 . T . PASS END=228582521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:22,0 chr1 228582522 . C . PASS END=228582535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr1 228582536 . A . PASS END=228582536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 228582537 . G . PASS END=228582542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 228582543 . A . PASS END=228582558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,762:0,50,255:20,0 chr1 228582559 . G . PASS END=228582563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 228582564 . A . PASS END=228582591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,49,255:19,0 chr1 228582592 . A . PASS END=228582592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:16,0 chr1 228582593 . A . PASS END=228582598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr1 228582599 . C . PASS END=228582606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:21,0 chr1 228582607 . C . PASS END=228582607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 228582608 . C . PASS END=228582612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr1 228582613 . T . PASS END=228582615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr1 228582616 . G . PASS END=228582628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,74,255:25,0 chr1 228582629 . G . PASS END=228582631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228582632 . A . PASS END=228582633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 228582634 . G . PASS END=228582634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228582635 . G . PASS END=228582635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr1 228582636 . C . PASS END=228582656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:31,0 chr1 228582657 . A . PASS END=228582657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 228582658 . G . PASS END=228582700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1149:0,83,255:37,0 chr1 228582701 . A . PASS END=228582701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1192:0,61,255:33,0 chr1 228582702 . G . PASS END=228582718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:34:0,91,1258:0,91,255:36,0 chr1 228582719 . C . PASS END=228582719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:30,0 chr1 228582720 . T . PASS END=228582723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1119:0,82,255:31,0 chr1 228582724 . C . PASS END=228582724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:29,0 chr1 228582725 . A . PASS END=228582725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 228582726 . C . PASS END=228582726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 228582727 . G . PASS END=228582728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 228582729 . T . PASS END=228582729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:29,0 chr1 228582730 . C . PASS END=228582741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:30,0 chr1 228582742 . C . PASS END=228582742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:25,0 chr1 228582743 . C . PASS END=228582749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 228582750 . C . PASS END=228582751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228582752 . C . PASS END=228582753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228582754 . G . PASS END=228582760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:29:0,72,1080:0,77,255:26,0 chr1 228582761 . C . PASS END=228582762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228582763 . G . PASS END=228582770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 228582771 . C . PASS END=228582776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr1 228582777 . C . PASS END=228582778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 228582779 . T . PASS END=228582779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228582780 . C . PASS END=228582784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,988:0,73,255:26,0 chr1 228582785 . T . PASS END=228582785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228582786 . A . PASS END=228582786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 228582787 . G . PASS END=228582787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228582788 . T . PASS END=228582797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr1 228582798 . A . PASS END=228582799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:25,0 chr1 228582800 . G . PASS END=228582809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 228582810 . C . PASS END=228582810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:22,0 chr1 228582811 . C . PASS END=228582817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr1 228582818 . A . PASS END=228582818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 228582819 . G . PASS END=228582842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,925:0,67,255:26,0 chr1 228582843 . G . PASS END=228582847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 228582848 . G . PASS END=228582848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:30,0 chr1 228582849 . G . PASS END=228582851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 228582852 . T . PASS END=228582852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 228582853 . G . PASS END=228582874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr1 228582875 . T . PASS END=228582875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:27,0 chr1 228582876 . C . PASS END=228582876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 228582877 . C . PASS END=228582879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 228582880 . C . PASS END=228582898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 228582899 . T . PASS END=228582899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr1 228582900 . C . PASS END=228582906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 228582907 . C . PASS END=228582915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1053:0,71,255:26,0 chr1 228582916 . C . PASS END=228582918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228582919 . A . PASS END=228582950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 228582951 . C . PASS END=228582951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 228582952 . C . PASS END=228582953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 228584349 . T . PASS END=228584683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1215:0,95,255:40,0 chr1 228584684 . C . PASS END=228584687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 228584688 . G . PASS END=228584691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:27,0 chr1 228584692 . A . PASS END=228584707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,978:0,67,255:25,0 chr1 228584708 . T . PASS END=228584708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 228584709 . A . PASS END=228584711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 228584712 . C . PASS END=228584712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr1 228584713 . A . PASS END=228584715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 228584716 . A . PASS END=228584716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 228584717 . C . PASS END=228584720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 228584721 . T . PASS END=228584721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 228584722 . G . PASS END=228584728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 228584729 . G . PASS END=228584729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 228584730 . C . PASS END=228584736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 228584737 . A . PASS END=228584757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 228584758 . A . PASS END=228584758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 228584759 . C . PASS END=228584759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 228584760 . A . PASS END=228584760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr1 228584761 . A . PASS END=228584763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr1 228584781 . G . PASS END=228584785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,609:0,21,255:17,0 chr1 228584786 . C . PASS END=228584786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr1 228584787 . A . PASS END=228584788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:16,0 chr1 228584789 . C . PASS END=228584789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 228584790 . T . PASS END=228584791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:15,0 chr1 228584792 . G . PASS END=228584792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 228584793 . G . PASS END=228584799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,668:0,21,255:18,0 chr1 228584800 . C . PASS END=228584800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr1 228584801 . C . PASS END=228584806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:18,0 chr1 228584807 . C . PASS END=228584807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr1 228584808 . C . PASS END=228584808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 228584809 . T . PASS END=228584814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr1 228584815 . C . PASS END=228584815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228584816 . C . PASS END=228584816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr1 228584817 . C . PASS END=228584817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,705:0,57,255:19,0 chr1 228584818 . C . PASS END=228584818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 228584819 . C . PASS END=228584819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:18,0 chr1 228584820 . C . PASS END=228584820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr1 228584821 . T . PASS END=228584821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 228584822 . C . PASS END=228584823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr1 228584824 . A . PASS END=228584828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 228584829 . A . PASS END=228584829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 228584830 . G . PASS END=228584866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:24,0 chr1 228588665 . C . PASS END=228588666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228588667 . G . PASS END=228588679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 228588680 . A C, 49.86 PASS DP=15;MQ=250.00;MQRankSum=3.183;ReadPosRankSum=0.405;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:7,5,0:1,2,0:48:85,0,50,244,286,530:218,0,235:8,0:4.9855e+01,6.6527e-05,5.3000e+01,2.4442e+02,3.2084e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,4,3:3,5,4,3 chr1 228588681 . G . PASS END=228588712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr1 228588713 . G . PASS END=228588713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 228588714 . A . PASS END=228588717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr1 228588718 . G . PASS END=228588802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,615:0,44,255:19,0 chr1 228588803 . C . PASS END=228588803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 228588804 . C . PASS END=228588813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr1 228588814 . G . PASS END=228588814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr1 228588815 . C . PASS END=228588838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,627:0,40,255:18,0 chr1 228588839 . A . PASS END=228588839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,515:0,37,255:15,0 chr1 228588840 . C . PASS END=228588845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228588846 . A . PASS END=228588846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 228588847 . G . PASS END=228588847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 228588848 . A . PASS END=228588848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr1 228588849 . C . PASS END=228588854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr1 228588855 . A . PASS END=228588855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 228588856 . A . PASS END=228588859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 228588860 . A . PASS END=228588860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 228588861 . C . PASS END=228588874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr1 228588875 . C . PASS END=228588883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:13,0 chr1 228588884 . C . PASS END=228588886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 228588887 . C . PASS END=228588890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 228588891 . A . PASS END=228588892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 228588893 . C . PASS END=228588895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 228589767 . C . PASS END=228589895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:33:0,86,1225:0,86,255:40,0 chr1 228593855 . C . PASS END=228593872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,111:0,12,111:6,0 chr1 228593873 . G . PASS END=228593873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 228593874 . T . PASS END=228593874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr1 228593875 . C . PASS END=228593892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr1 228593893 . G . PASS END=228593897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 228593898 . G . PASS END=228593906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr1 228593907 . T . PASS END=228593923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 228593924 . G . PASS END=228593934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 228593935 . G . PASS END=228593936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 228593937 . A . PASS END=228593940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228593941 . G . PASS END=228593941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 228593942 . C . PASS END=228593981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:16,0 chr1 228593982 . G . PASS END=228593982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 228593983 . C . PASS END=228593983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228593984 . G . PASS END=228593984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228593985 . G . PASS END=228593990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 228593991 . A . PASS END=228593991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr1 228593992 . C . PASS END=228594007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 228594008 . C . PASS END=228594008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 228594009 . G . PASS END=228594087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,607:0,41,255:19,0 chr1 228594088 . G . PASS END=228594089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 228594090 . T . PASS END=228594090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 228594091 . C . PASS END=228594104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 228594105 . C . PASS END=228594127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,43,255:18,0 chr1 228594128 . G . PASS END=228594128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr1 228594129 . C . PASS END=228594133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 228594134 . G . PASS END=228594158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 228594159 . A . PASS END=228594209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr1 228594210 . A . PASS END=228594210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 228594211 . T . PASS END=228594219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,241:6,0 chr1 228594220 . T . PASS END=228594220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 228594221 . G . PASS END=228594221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 228594222 . G . PASS END=228594225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 228594226 . C . PASS END=228594226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 228594227 . C . PASS END=228594245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,227:6,0 chr1 228594246 . A . PASS END=228594246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:5,0 chr1 228594247 . G . PASS END=228594262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,202:6,0 chr1 228595902 . C . PASS END=228595924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr1 228595925 . C . PASS END=228595925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228595926 . T . PASS END=228595926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr1 228595927 . G . PASS END=228595927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 228595928 . T . PASS END=228595928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228595929 . G . PASS END=228595929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 228595930 . G . PASS END=228595937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 228595938 . C . PASS END=228595939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 228595940 . T . PASS END=228595948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,637:0,41,255:19,0 chr1 228595949 . A . PASS END=228595960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:21,0 chr1 228595961 . C . PASS END=228595961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 228595962 . C . PASS END=228595962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 228595963 . A . PASS END=228595963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr1 228595964 . G . PASS END=228595972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:22,0 chr1 228595973 . A . PASS END=228595973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:21,0 chr1 228595974 . A . PASS END=228595977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228595978 . T . PASS END=228595978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 228595979 . G . PASS END=228596016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,886:0,64,255:26,0 chr1 228596017 . A . PASS END=228596019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 228596020 . T . PASS END=228596036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr1 228596037 . A . PASS END=228596037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:22,0 chr1 228596038 . C . PASS END=228596050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 228596051 . C . PASS END=228596051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:24,0 chr1 228596052 . T . PASS END=228596114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,873:0,62,255:26,0 chr1 228596115 . G . PASS END=228596117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228596118 . T . PASS END=228596133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 228596134 . G . PASS END=228596136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228596137 . A . PASS END=228596138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr1 228596139 . G . PASS END=228596146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 228596147 . T . PASS END=228596148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 228596149 . C . PASS END=228596158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1178:0,83,255:30,0 chr1 228596159 . G . PASS END=228596159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 228596160 . C . PASS END=228596161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 228596162 . G . PASS END=228596162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 228596163 . C . PASS END=228596184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1115:0,87,255:30,0 chr1 228596185 . G . PASS END=228596187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 228596188 . C . PASS END=228596189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:23,0 chr1 228596190 . C . PASS END=228596196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:30,0 chr1 228596197 . A . PASS END=228596197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:29,0 chr1 228596198 . C . PASS END=228596208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 228596209 . C . PASS END=228596209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr1 228596210 . G . PASS END=228596228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:32,0 chr1 228596229 . C . PASS END=228596230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:25,0 chr1 228596231 . C . PASS END=228596244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1117:0,90,255:30,0 chr1 228596245 . A . PASS END=228596245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 228596246 . A . PASS END=228596249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 228596250 . G . PASS END=228596250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr1 228596251 . T . PASS END=228596251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 228596252 . C . PASS END=228596252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr1 228596253 . C . PASS END=228596293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1155:0,80,255:36,0 chr1 228596294 . A . PASS END=228596294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1270:0,78,255:32,0 chr1 228596295 . G . PASS END=228596418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,88,255:40,2 chr1 228596419 . G . PASS END=228596425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1080:0,86,255:26,0 chr1 228596426 . C . PASS END=228596428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,85,255:28,0 chr1 228596429 . A . PASS END=228596429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr1 228596430 . G . PASS END=228596430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228596431 . G . PASS END=228596431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 228596432 . T . PASS END=228596434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 228596435 . C . PASS END=228596435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 228596436 . A . PASS END=228596438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228596439 . A . PASS END=228596450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,67,255:26,0 chr1 228596451 . C . PASS END=228596452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,72,255:18,0 chr1 228596724 . C . PASS END=228596725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228596726 . A . PASS END=228596726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 228596727 . C . PASS END=228596745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:19,0 chr1 228596746 . C . PASS END=228596746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 228596747 . A . PASS END=228596747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 228596748 . G . PASS END=228596748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 228596749 . T . PASS END=228596754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 228596755 . T . PASS END=228596759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr1 228596760 . A . PASS END=228596760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:22,0 chr1 228596761 . G . PASS END=228596773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 228596774 . T . PASS END=228596777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228596778 . A . PASS END=228596778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,939:0,10,255:27,4 chr1 228596779 . C . LowGQ END=228596779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:0:31:0,0,947:15,0,255:29,2 chr1 228596780 . C . PASS END=228596780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:30,0 chr1 228596781 . C . PASS END=228596787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1066:0,90,255:33,0 chr1 228596788 . T . PASS END=228596788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,958:0,52,255:30,0 chr1 228596789 . T . PASS END=228596794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 228596795 . C . PASS END=228596795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:30,0 chr1 228596796 . T . PASS END=228596801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 228596802 . G . PASS END=228596802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 228596803 . G . PASS END=228596932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:30:0,82,1217:0,82,255:37,0 chr1 228596933 . T . PASS END=228596933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 228596934 . T . PASS END=228596941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 228596942 . C . PASS END=228596951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 228596952 . G . PASS END=228596952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 228596953 . C . PASS END=228596953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 228596954 . A . PASS END=228596957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr1 228596958 . C . PASS END=228596959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 228596960 . C . PASS END=228596961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 228596962 . C . PASS END=228596966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 228596967 . G . PASS END=228596967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 228596968 . T . PASS END=228596976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr1 228597090 . C . PASS END=228597090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228597091 . T . PASS END=228597091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 228597092 . G . PASS END=228597096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:15,0 chr1 228597097 . G . PASS END=228597097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr1 228597098 . G . PASS END=228597106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228597107 . C . PASS END=228597107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr1 228597108 . A . PASS END=228597112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 228598647 . C . PASS END=228598659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:11,0 chr1 228598660 . A . PASS END=228598660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 228598661 . G . PASS END=228598665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr1 228598666 . C . PASS END=228598666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 228598667 . C . PASS END=228598682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 228598683 . C . PASS END=228598689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228598690 . T . LowGQ END=228598694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:15:0,0,451:0,0,255:15,2 chr1 228598695 . C . PASS END=228598713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:18,0 chr1 228598714 . T . PASS END=228598714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 228598715 . G . PASS END=228598744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,54,255:19,0 chr1 228598745 . C . PASS END=228598762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 228598763 . T . PASS END=228598763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 228598764 . C . PASS END=228598770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228598771 . T . PASS END=228598771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 228598772 . C . PASS END=228598836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,697:0,62,255:26,0 chr1 228598837 . A . PASS END=228598867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 228598868 . T . PASS END=228598877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr1 228601497 . C . PASS END=228601497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 228601498 . C . PASS END=228601501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228601502 . C . PASS END=228601503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228601504 . C . PASS END=228601556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1185:0,80,255:37,0 chr1 228601557 . G . PASS END=228601557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr1 228601558 . C . PASS END=228601573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr1 228601574 . A . PASS END=228601576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228601577 . T . PASS END=228601577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:23,0 chr1 228601578 . C . PASS END=228601593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr1 228602345 . C . PASS END=228602345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 228602346 . T . PASS END=228602350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 228602351 . C . PASS END=228602351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 228602352 . C . PASS END=228602353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 228602354 . C . PASS END=228602354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 228602355 . T . LowGQ END=228602355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,471:7,0,255:14,0 chr1 228602356 . G . PASS END=228602356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 228602357 . C . PASS END=228602359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 228602360 . T . PASS END=228602361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr1 228602362 . C . PASS END=228602362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 228602363 . C . PASS END=228602363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr1 228602364 . T . PASS END=228602365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 228602366 . C . PASS END=228602366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 228602367 . T . PASS END=228602368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr1 228602369 . G . PASS END=228602370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 228602371 . C . PASS END=228602371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 228602372 . G . PASS END=228602374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 228602375 . C . PASS END=228602376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 228602377 . G . PASS END=228602377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 228602378 . C . PASS END=228602378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr1 228602379 . A . PASS END=228602379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 228602380 . C . PASS END=228602380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:15,0 chr1 228602381 . C . PASS END=228602381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr1 228602382 . C . PASS END=228602382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 228602383 . T . PASS END=228602384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,545:0,48,255:17,0 chr1 228602385 . T . PASS END=228602385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 228602386 . G . PASS END=228602386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 228602387 . C . PASS END=228602387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr1 228602388 . A . PASS END=228602388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 228602389 . G . PASS END=228602405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,665:0,41,255:19,0 chr1 228602406 . T . PASS END=228602408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228602409 . C . PASS END=228602409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 228602410 . T . PASS END=228602413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 228602414 . C . PASS END=228602415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 228602416 . C . PASS END=228602416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228602417 . C . PASS END=228602417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 228602418 . A . PASS END=228602421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228602422 . A . PASS END=228602422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 228602423 . G . PASS END=228602423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 228602424 . A . PASS END=228602424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 228602425 . T . PASS END=228602425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,776:0,41,255:19,0 chr1 228602426 . G . PASS END=228602426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228602427 . G . PASS END=228602428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 228602429 . G . PASS END=228602429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 228602430 . C . PASS END=228602465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:19,0 chr1 228602466 . T . PASS END=228602480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr1 228602481 . A . PASS END=228602517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:19,0 chr1 228602518 . T . PASS END=228602518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 228602519 . C . PASS END=228602549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,629:0,45,255:17,0 chr1 228602550 . A . PASS END=228602550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228602551 . G . PASS END=228602552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228602553 . A . PASS END=228602557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 228602558 . C . PASS END=228602571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr1 228602572 . T . PASS END=228602572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,599:0,29,255:16,0 chr1 228602573 . C . PASS END=228602590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 228602591 . G . PASS END=228602600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:22,0 chr1 228602601 . C . PASS END=228602608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228602609 . C . PASS END=228602612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228602613 . C . PASS END=228602617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228602618 . C . PASS END=228602622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 228602623 . T . PASS END=228602623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,687:0,38,255:21,0 chr1 228602624 . C . PASS END=228602625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 228602626 . T . PASS END=228602626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 228602627 . G . PASS END=228602654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:23,0 chr1 228602655 . A . PASS END=228602655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 228602656 . T . PASS END=228602700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:23,0 chr1 228602701 . C . PASS END=228602701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:22,0 chr1 228602702 . T . PASS END=228602718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr1 228602719 . A . PASS END=228602719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 228602720 . G . PASS END=228602734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 228602735 . T . PASS END=228602740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,837:0,56,255:19,0 chr1 228602741 . C . PASS END=228602749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 228602750 . T . PASS END=228602750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 228602751 . C . PASS END=228602756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 228602757 . A . PASS END=228602773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:19,0 chr1 228612616 . C . PASS END=228612618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 228612619 . G . PASS END=228612620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr1 228612621 . C . PASS END=228612621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 228612622 . C . PASS END=228612629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228612630 . C . PASS END=228612630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr1 228612631 . G . PASS END=228612634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 228612635 . A . PASS END=228612635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 228612636 . T . PASS END=228612646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,868:0,72,255:26,0 chr1 228612647 . A . PASS END=228612649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr1 228612650 . T . PASS END=228612650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 228612651 . G . PASS END=228612660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr1 228612661 . A . PASS END=228612661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 228612662 . G . PASS END=228612697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:31,0 chr1 228612698 . A . PASS END=228612698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr1 228612699 . G . PASS END=228612709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1233:0,93,255:32,0 chr1 228612710 . T . PASS END=228612710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr1 228612711 . C . PASS END=228612753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1188:0,90,255:32,0 chr1 228612754 . C . PASS END=228612773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr1 228612774 . A . PASS END=228612799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 228612800 . G . PASS END=228612800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 228612801 . C . PASS END=228612824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,566:0,51,255:18,0 chr1 228612825 . A . PASS END=228612825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 228612826 . G . PASS END=228612831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 228612832 . C . PASS END=228612837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,54,255:13,0 chr1 228612838 . G T, 100.72 PASS DP=18;MQ=242.86;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,9,0:0,9,0:51:138,54,0,669,54,669:255,54,0:0,0:1.0072e+02,5.0717e+01,3.6758e-05,4.5000e+02,8.5487e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,12:0,0,9,9 chr1 228612839 . A . PASS END=228612873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,466:0,42,255:15,0 chr1 228612874 . C . PASS END=228612874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr1 228612875 . T . PASS END=228612884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 228612885 . C . PASS END=228612891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 228612892 . G A, 50.00 PASS DP=15;MQ=245.14;MQRankSum=1.002;ReadPosRankSum=1.237;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,9,0:0.600,0.000:15:3,4,0:3,5,0:48:85,0,49,322,215,536:255,0,187:5,0:5.0000e+01,7.2740e-05,5.1689e+01,3.2155e+02,2.4937e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,2,7:1,5,5,4 chr1 228612893 . C . PASS END=228612898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr1 228612899 . C . PASS END=228612929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 228612930 . T . PASS END=228612933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 228612934 . A . PASS END=228612937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 228612938 . G . PASS END=228612952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 228612953 . A . PASS END=228612953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:7,0 chr1 228612954 . C . PASS END=228613014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 228613015 . G . PASS END=228613026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:9,0 chr1 228645126 . T . PASS END=228645128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 228645129 . C . PASS END=228645135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 228645136 . T . PASS END=228645138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 228645139 . G . PASS END=228645160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr1 228645161 . T . PASS END=228645161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 228645162 . C . PASS END=228645162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 228645163 . T . PASS END=228645163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 228645164 . T . PASS END=228645198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,770:0,63,255:26,0 chr1 228645199 . C . PASS END=228645199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228645200 . C . PASS END=228645304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,837:0,62,255:26,0 chr1 228645305 . G . PASS END=228645305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 228645306 . C . PASS END=228645309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 228645310 . G . PASS END=228645311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:30:23:0,30,713:0,30,255:21,0 chr1 228645312 . G . PASS END=228645312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,684:0,14,255:19,0 chr1 228645313 . T . PASS END=228645313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228645314 . T . PASS END=228645314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 228645315 . G . PASS END=228645316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:11:22:0,11,706:0,11,255:19,0 chr1 228645317 . C . PASS END=228645317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:20,0 chr1 228645318 . G . PASS END=228645318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,743:0,14,255:19,0 chr1 228645319 . G . PASS END=228645319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 228645320 . C . PASS END=228645320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 228645321 . A . PASS END=228645321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,673:0,16,255:17,0 chr1 228645322 . A . PASS END=228645327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr1 228645328 . A . PASS END=228645328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,635:0,13,255:15,0 chr1 228645329 . G . PASS END=228645332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:17,0 chr1 228645333 . C . PASS END=228645334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr1 228645335 . C . PASS END=228645337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 228645338 . C . PASS END=228645339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:12,0 chr1 228645340 . G . PASS END=228645340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228645341 . T . PASS END=228645341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr1 228645342 . C . PASS END=228645342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228645343 . A . PASS END=228645343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:13,0 chr1 228645344 . A . PASS END=228645345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228645346 . T . PASS END=228645350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,535:0,31,255:13,0 chr1 228645351 . G . PASS END=228645354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 228645355 . A . PASS END=228645355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:13,0 chr1 228645356 . C . PASS END=228645356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 228645357 . C . PASS END=228645357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr1 228645358 . G . PASS END=228645359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228645360 . G . PASS END=228645360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr1 228645361 . G . PASS END=228645362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 228645363 . C . PASS END=228645363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,451:0,1,255:11,0 chr1 228645364 . A . PASS END=228645364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228645365 . G . PASS END=228645365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,441:0,15,255:11,0 chr1 228645366 . A . LowGQ END=228645366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,382:0,0,255:11,0 chr1 228645367 . T . PASS END=228645369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228645370 . A . PASS END=228645371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,391:0,28,255:12,0 chr1 228645372 . C . LowGQ END=228645372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,271:22,0,255:11,0 chr1 228645373 . G . PASS END=228645376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr1 228645377 . C . PASS END=228645377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:14:16:0,14,360:0,14,255:14,0 chr1 228645378 . G . PASS END=228645378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:16,0 chr1 228645379 . C . PASS END=228645381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,422:0,31,255:15,0 chr1 228645382 . G . PASS END=228645383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228645384 . G . PASS END=228645384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:14:16:0,14,300:0,14,255:13,0 chr1 228645385 . C . PASS END=228645385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 228645386 . C . PASS END=228645387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228645388 . A . PASS END=228645388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,435:0,1,255:13,0 chr1 228645389 . C . PASS END=228645389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228645390 . G . PASS END=228645390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,397:0,1,255:13,0 chr1 228645391 . C . PASS END=228645391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 228645392 . G . PASS END=228645392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:14,0 chr1 228645393 . C . PASS END=228645397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,438:0,45,255:15,0 chr1 228645398 . A . PASS END=228645398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr1 228645399 . A . PASS END=228645399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 228645400 . T . PASS END=228645400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:15,0 chr1 228645401 . A . PASS END=228645414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr1 228645415 . A . PASS END=228645415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr1 228645416 . G . PASS END=228645429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:15,0 chr1 228645430 . C . PASS END=228645432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228645433 . C . PASS END=228645433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 228645434 . C . PASS END=228645436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:15:0,34,540:0,34,255:13,0 chr1 228645437 . C . PASS END=228645437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 228645438 . G . PASS END=228645438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,482:0,18,255:12,0 chr1 228645439 . G . PASS END=228645439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 228645440 . G . PASS END=228645441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 228645442 . A . PASS END=228645453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 228645454 . G . PASS END=228645454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 228645455 . C . PASS END=228645463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 228645464 . A . PASS END=228645465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr1 228645466 . C . PASS END=228645518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,615:0,40,255:19,0 chr1 228645831 . A . PASS END=228645831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 228645832 . T . PASS END=228645832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr1 228645833 . G . PASS END=228645833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 228645834 . C . PASS END=228645836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr1 228645837 . G . PASS END=228645837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 228645838 . A . PASS END=228645846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:23,0 chr1 228645847 . A . PASS END=228645847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 228645848 . A . PASS END=228645854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr1 228645855 . C . PASS END=228645873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr1 228645874 . C . PASS END=228645874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 228645875 . T . PASS END=228645875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 228645876 . A . PASS END=228645876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr1 228645877 . A . PASS END=228645889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr1 228645890 . C . PASS END=228645890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 228645891 . A . PASS END=228645894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 228645895 . C . PASS END=228645895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 228645896 . A . PASS END=228645897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:24,0 chr1 228645898 . A . PASS END=228645898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,1 chr1 228645899 . G . PASS END=228645899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 228645900 . A . PASS END=228645917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,856:0,61,255:25,0 chr1 228645918 . C . PASS END=228645918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:23,0 chr1 228645919 . G . PASS END=228645936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,878:0,61,255:24,0 chr1 228645937 . A . PASS END=228645937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 228645938 . G . PASS END=228645948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 228645949 . T . PASS END=228645949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:25,0 chr1 228645950 . C . PASS END=228645970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr1 228645971 . G . PASS END=228645981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,56,255:19,0 chr1 228645982 . C . PASS END=228645990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 228645991 . G . PASS END=228645991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 228645992 . C . PASS END=228645993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 228645994 . T . PASS END=228645994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:23,0 chr1 228645995 . C . PASS END=228645997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr1 228645998 . G . PASS END=228645998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228645999 . T . PASS END=228645999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 228646000 . C . PASS END=228646000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 228646001 . C . PASS END=228646001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 228646002 . A . PASS END=228646002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 228646003 . A . PASS END=228646003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 228646004 . G . PASS END=228646004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228646005 . G . PASS END=228646005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 228646006 . C . PASS END=228646006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 228646007 . C . PASS END=228646008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 228646009 . T . PASS END=228646010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 228646011 . G . PASS END=228646013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1064:0,60,255:29,0 chr1 228646014 . A . PASS END=228646014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 228646015 . T . PASS END=228646015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:28,0 chr1 228646016 . C . PASS END=228646018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1149:0,93,255:32,0 chr1 228646019 . G . PASS END=228646019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:30,0 chr1 228646020 . A . PASS END=228646020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr1 228646021 . A . PASS END=228646021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:31,0 chr1 228646022 . C . PASS END=228646029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:31,0 chr1 228646030 . T . PASS END=228646030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 228646031 . C . PASS END=228646038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 228646039 . T . PASS END=228646039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:27,0 chr1 228646040 . C . PASS END=228646040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228646041 . T . PASS END=228646041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:28,0 chr1 228646042 . T . PASS END=228646043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228646044 . G . PASS END=228646044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 228646045 . A . PASS END=228646058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1064:0,87,255:31,0 chr1 228646059 . G . PASS END=228646059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 228646060 . A . PASS END=228646079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1095:0,80,255:33,0 chr1 228646080 . T . PASS END=228646081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:34,0 chr1 228646082 . C . PASS END=228646082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:33,0 chr1 228646083 . A . PASS END=228646119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1133:0,80,255:35,0 chr1 228646120 . C . PASS END=228646120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:28,0 chr1 228646121 . G . PASS END=228646132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 228646133 . G . PASS END=228646133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:26,0 chr1 228646134 . C . PASS END=228646136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228646137 . C . PASS END=228646140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228646141 . C . PASS END=228646143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 228646144 . G . PASS END=228646159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr1 228646160 . C . PASS END=228646161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 228646162 . C . PASS END=228646164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228646165 . T . PASS END=228646171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228646172 . G . PASS END=228646185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 228646186 . T . PASS END=228646206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:16:0,42,630:0,48,255:19,0 chr1 228646207 . A . PASS END=228646207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 228646208 . G . PASS END=228646210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 228646211 . A . PASS END=228646211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 228675190 . C . PASS END=228675264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,47:0,6,47:3,0 chr1 228675265 . G . PASS END=228675269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 228675270 . C . LowGQ END=228675270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 228675271 . G . PASS END=228675282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 228675283 . T . LowGQ END=228675283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:15,0,137:4,0 chr1 228675284 . G . PASS END=228675298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr1 228675299 . T . LowDepth;LowGQ END=228675532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 228675533 . A . PASS END=228675541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 228675542 . A . PASS END=228675552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 228675553 . C . PASS END=228675569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,116:0,9,116:3,0 chr1 228675570 . G C, 1.19 DRAGENSnpHardQUAL DP=3;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:2,1,0:0.333,0.000:3:2,0,0:0,1,0:6:30,0,47,36,72,107:30,0,69:2,0:1.1883e+00,6.2103e+00,5.6201e+01,4.1978e+01,1.1252e+02,1.1652e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,1,0:0,2,0,1 chr1 228675571 . C . PASS END=228675579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 228676661 . G . PASS END=228676665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:30,0 chr1 228676666 . C . PASS END=228676666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 228676667 . A . PASS END=228676671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:31,0 chr1 228676672 . G . PASS END=228676672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr1 228676673 . T . PASS END=228676689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1162:0,96,255:32,0 chr1 228676690 . A . PASS END=228676690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr1 228676691 . A . PASS END=228676701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1196:0,96,255:32,0 chr1 228676702 . T . PASS END=228676702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 228676703 . G . PASS END=228676722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1202:0,83,255:31,0 chr1 228676723 . C . PASS END=228676727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228676728 . C . PASS END=228676734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1185:0,80,255:28,0 chr1 228676735 . A . PASS END=228676735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 228676736 . G . PASS END=228676736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 228676737 . C . PASS END=228676753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,998:0,68,255:26,0 chr1 228680754 . G . PASS END=228680754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr1 228680755 . G . PASS END=228680950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,970:0,81,255:40,0 chr1 228680951 . C . PASS END=228680966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:33,0 chr1 228680967 . C . PASS END=228680975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,80,255:24,0 chr1 228681584 . T . PASS END=228681586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 228696347 . T . PASS END=228696480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:31:0,80,1166:0,80,255:40,0 chr1 228696481 . G . PASS END=228696482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228696483 . G . PASS END=228696484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228696485 . G . PASS END=228696485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 228696486 . C . PASS END=228696486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 228696487 . T . PASS END=228696501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr1 228698060 . T . PASS END=228698076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 228698077 . A . PASS END=228698078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,471:0,26,255:14,0 chr1 228698079 . A . PASS END=228698097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:16,0 chr1 228698098 . C . PASS END=228698099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 228698100 . G . PASS END=228698101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 228698102 . C . PASS END=228698102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 228698103 . A . PASS END=228698105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 228698106 . T . PASS END=228698131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:23,0 chr1 228698132 . A . PASS END=228698132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr1 228698133 . G . PASS END=228698135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:24,0 chr1 228698136 . A . PASS END=228698136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 228698137 . G . PASS END=228698137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 228698138 . G . PASS END=228698150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr1 228698151 . A . PASS END=228698151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 228698152 . T . PASS END=228698164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 228698165 . A . PASS END=228698208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,986:0,74,255:27,0 chr1 228698209 . C . PASS END=228698216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228698217 . C . PASS END=228698217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr1 228698218 . T . PASS END=228698222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 228698223 . G . PASS END=228698236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,925:0,75,255:25,0 chr1 228698237 . T . PASS END=228698237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 228698238 . A . PASS END=228698250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 228698251 . C . PASS END=228698251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:23,0 chr1 228698252 . A . PASS END=228698252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 228698253 . G . PASS END=228698273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1119:0,90,255:30,0 chr1 228698274 . T . PASS END=228698274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:27,0 chr1 228698275 . C . PASS END=228698275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228698276 . T . PASS END=228698285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1078:0,74,255:26,0 chr1 228698286 . A . PASS END=228698302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 228698303 . A . PASS END=228698303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 228698304 . C . PASS END=228698323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:32:0,89,1249:0,89,255:34,0 chr1 228698324 . C . PASS END=228698324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr1 228698325 . G . PASS END=228698343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1166:0,85,255:32,0 chr1 228698344 . G . PASS END=228698354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr1 228698355 . T . PASS END=228698356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 228698357 . G . PASS END=228698366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 228698367 . T . PASS END=228698367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr1 228698368 . C . PASS END=228698374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr1 228698375 . C . PASS END=228698379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 228699352 . C . PASS END=228699353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 228699354 . G . PASS END=228699354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr1 228699355 . C . PASS END=228699360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 228699361 . G . PASS END=228699361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 228699362 . C . PASS END=228699362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 228699363 . A . PASS END=228699365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 228699366 . T . PASS END=228699367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:54:29:0,54,953:0,54,255:26,0 chr1 228699368 . C . PASS END=228699368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 228699369 . A . PASS END=228699370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 228699371 . A . PASS END=228699372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:28,0 chr1 228699373 . T . PASS END=228699374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 228699375 . G . PASS END=228699375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 228699376 . C . PASS END=228699376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 228699377 . C . PASS END=228699378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 228699379 . C . PASS END=228699379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 228699380 . G . PASS END=228699380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 228699381 . C . PASS END=228699382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228699383 . G . PASS END=228699383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:27,0 chr1 228699384 . A . PASS END=228699439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:30:0,83,1180:0,83,255:40,0 chr1 228699440 . C . PASS END=228699476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,117,1784:0,117,255:40,0 chr1 228699477 . T C, 49.84 PASS DP=46;MQ=250.00;MQRankSum=5.794;ReadPosRankSum=2.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,22,0:0.478,0.000:46:9,13,0:15,9,0:48:85,0,50,779,850,1629:255,0,255:24,0:4.9840e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,11,11:13,11,14,8 chr1 228699478 . G . PASS END=228699514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,117,1755:0,128,255:40,0 chr1 228699515 . C . PASS END=228699565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:31:0,87,1280:0,93,255:40,0 chr1 228699566 . G . PASS END=228699566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr1 228699567 . G . PASS END=228699567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 228699568 . A . PASS END=228699569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 228699570 . G . PASS END=228699574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 228699575 . G . PASS END=228699578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,1080:0,66,255:24,0 chr1 228699579 . C . PASS END=228699593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1169:0,80,255:30,0 chr1 228699594 . T . PASS END=228699594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 228699595 . C . PASS END=228699619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr1 228699620 . G . PASS END=228699645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr1 228699646 . G . PASS END=228699658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 228783768 . A . PASS END=228783781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr1 228783782 . C . PASS END=228783848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:18,0 chr1 228783849 . C . PASS END=228783859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr1 228783860 . C . PASS END=228783877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 228783878 . G . PASS END=228783881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 228783882 . C . PASS END=228783882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 228783883 . G . PASS END=228783892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr1 228783893 . C . PASS END=228783897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228783898 . G . PASS END=228783913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,482:0,39,255:13,0 chr1 228783914 . G . PASS END=228783915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 228783916 . T . PASS END=228783916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 228783917 . C . PASS END=228783920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 228783921 . G . PASS END=228783926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr1 228783927 . A . PASS END=228783947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 228783948 . C . PASS END=228783979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,443:0,36,255:13,0 chr1 228783980 . C . PASS END=228783995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr1 228783996 . C . PASS END=228784008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr1 228784009 . C . PASS END=228784028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 228784029 . A . PASS END=228784029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 228784030 . C . PASS END=228784052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr1 228784053 . A . PASS END=228784055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228784056 . G . PASS END=228784056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 228784057 . G . PASS END=228784057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 228784058 . C . PASS END=228784193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,545:0,45,255:19,0 chr1 228784194 . C . PASS END=228784196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 228784197 . C . PASS END=228784200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 228784201 . G . PASS END=228784202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 228784203 . C . PASS END=228784203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 228784204 . C . PASS END=228784209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:26,0 chr1 228784210 . T . PASS END=228784210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 228784211 . C . PASS END=228784213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 228784214 . G . PASS END=228784221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 228784222 . C . PASS END=228784224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:29,0 chr1 228784225 . T . PASS END=228784225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 228784226 . G . PASS END=228784229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr1 228784230 . T . PASS END=228784230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr1 228784231 . T . PASS END=228784246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,997:0,90,255:30,0 chr1 228784247 . G . PASS END=228784247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 228784248 . G . PASS END=228784258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 228784259 . G T, 43.90 PASS DP=31;MQ=250.00;MQRankSum=4.521;ReadPosRankSum=3.200;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,11,0:0.355,0.000:31:7,5,0:13,6,0:43:79,0,50,365,715,1080:255,0,255:17,0:4.3900e+01,1.9855e-04,5.3000e+01,3.6450e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,8,4,7:9,11,6,5 chr1 228784260 . A . PASS END=228784262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr1 228784263 . C . PASS END=228784276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 228784277 . T . PASS END=228784277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 228784278 . T . PASS END=228784286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 228784287 . C . PASS END=228784313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,861:0,65,255:26,0 chr1 228784314 . T . PASS END=228784314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr1 228784315 . T . LowGQ END=228784315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,6:23:0:23:0,0,398:59,0,255:17,0 chr1 228784316 . T . PASS END=228784316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 228784317 . C . LowGQ END=228784317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,518:14,0,255:17,1 chr1 228784318 . T . PASS END=228784318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,609:0,13,255:20,0 chr1 228784319 . T . PASS END=228784319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr1 228784320 . T . PASS END=228784320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 228784321 . A . PASS END=228784322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,680:0,52,255:18,0 chr1 228871490 . A . LowDepth;LowGQ END=228871577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:3,0 chr1 228871578 . G . PASS END=228871578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 228871579 . A . LowGQ END=228871580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:5,0,60:3,0 chr1 228871581 . G . PASS END=228871585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:6,0 chr1 228871586 . C . PASS END=228871600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr1 228871601 . G . PASS END=228871603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:12,0 chr1 228871604 . C . PASS END=228871604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr1 228871605 . G . PASS END=228871605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 228871606 . G . PASS END=228871606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr1 228871607 . G . PASS END=228871607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 228871608 . G . PASS END=228871609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 228871610 . C . PASS END=228871610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 228871611 . G . PASS END=228871635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,499:0,45,255:19,0 chr1 228871636 . C . PASS END=228871639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 228871640 . A . PASS END=228871641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,654:0,43,255:20,0 chr1 228871642 . G . PASS END=228871642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 228871643 . T . PASS END=228871643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 228871644 . G . PASS END=228871644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr1 228871645 . C . PASS END=228871645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 228871646 . G . PASS END=228871648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228871649 . C . PASS END=228871649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 228871650 . T . PASS END=228871651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 228871652 . G . PASS END=228871652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 228871653 . T . PASS END=228871670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 228871671 . G . PASS END=228871722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,576:0,41,255:19,0 chr1 228871723 . C . PASS END=228871723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:11,0 chr1 228871724 . A . PASS END=228871724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 228871725 . T . PASS END=228871729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr1 228871730 . A . PASS END=228871730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 228871731 . C . PASS END=228871749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,443:0,39,255:13,0 chr1 228871750 . C . PASS END=228871750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 228871751 . G . PASS END=228871751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 228873420 . C . PASS END=228873478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,130,255:40,0 chr1 228879032 . G . PASS END=228879041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:26,0 chr1 228879042 . A . PASS END=228879043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 228879044 . A . PASS END=228879044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 228879045 . A . PASS END=228879267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:28:0,84,1063:0,84,255:40,0 chr1 228879268 . G . PASS END=228879276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,102,255:26,0 chr1 228879277 . G . PASS END=228879282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,950:0,81,255:27,0 chr1 228879283 . C . PASS END=228879286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr1 228879287 . G . PASS END=228879289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 228879290 . G . PASS END=228879290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 228879291 . A . PASS END=228879301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 228879302 . G . PASS END=228879322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:25,0 chr1 228879323 . G . PASS END=228879325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 228879326 . T . PASS END=228879329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 228879330 . C . PASS END=228879334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 228879335 . A . PASS END=228879335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr1 228879336 . A . PASS END=228879487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1103:0,90,255:40,0 chr1 229385442 . A . PASS END=229385584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:37:0,81,1267:0,81,255:40,0 chr1 229385585 . A . PASS END=229385585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,8:54:29:54:0,29,1471:0,29,255:40,0 chr1 229385586 . T . PASS END=229385663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:83:40:0,83,1260:0,83,255:40,0 chr1 229385664 . T . PASS END=229385665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:37:0,70,1278:0,70,255:26,0 chr1 229385666 . T . PASS END=229385673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:35:0,84,1260:0,88,255:29,0 chr1 229407087 . A . PASS END=229407117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:9,0 chr1 229422233 . A . PASS END=229422313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:91:0,120,1800:0,181,255:40,3 chr1 229424476 . T . PASS END=229424590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:54:0,120,1800:0,162,255:40,0 chr1 229431595 . G . PASS END=229431657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1239:0,86,255:39,0 chr1 229433229 . C . PASS END=229433369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:35:0,87,1245:0,89,255:40,0 chr1 229433370 . T . PASS END=229433370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 229433371 . G . PASS END=229433383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 229434724 . A . PASS END=229434819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:52:0,120,1800:0,121,255:40,0 chr1 229438609 . G . PASS END=229438613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 229438614 . C . PASS END=229438614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 229438615 . T . PASS END=229438621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 229438622 . A . PASS END=229438622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 229438623 . G . PASS END=229438640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,562:0,44,255:19,0 chr1 229438641 . A . PASS END=229438644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 229438645 . A . PASS END=229438653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 229438654 . A . PASS END=229438666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 229438667 . A . PASS END=229438668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,679:0,52,255:19,0 chr1 229438669 . A . PASS END=229438672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 229438673 . G . PASS END=229438673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 229438674 . A . PASS END=229438686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 229438687 . G . PASS END=229438724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,660:0,51,255:19,0 chr1 229440882 . A . PASS END=229441073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,2:96:99:55:0,120,1800:0,161,255:40,0 chr1 229460982 . T . PASS END=229460982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 229460983 . T . PASS END=229460990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,991:0,87,255:30,0 chr1 229460991 . T . PASS END=229460991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 229460992 . G . PASS END=229461158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,988:0,83,255:40,0 chr1 229462485 . C . PASS END=229462711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:40:0,108,1598:0,118,255:40,0 chr1 229462712 . T . PASS END=229462712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:22:40:0,22,991:0,22,255:31,0 chr1 229462713 . T . PASS END=229462743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1194:0,82,255:36,0 chr1 229462744 . A . PASS END=229462751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:28:0,71,1061:0,71,255:26,0 chr1 229462752 . T . PASS END=229462752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:23,0 chr1 229462753 . G . PASS END=229462753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 229476148 . C . PASS END=229476172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,191,255:40,0 chr1 229477790 . T . PASS END=229477792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 229477793 . G . PASS END=229477799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 229477800 . C . PASS END=229477830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 229477831 . C . PASS END=229477831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 229477832 . T . PASS END=229477834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr1 229477835 . G . PASS END=229477835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 229477836 . G . PASS END=229477853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr1 229477854 . G . PASS END=229477854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 229477855 . C . PASS END=229477880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 229477881 . G . PASS END=229477904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:9,0 chr1 229477905 . T . PASS END=229477927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 229477928 . C . PASS END=229477928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr1 229477929 . C . PASS END=229477936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:5,0 chr1 229477937 . C . PASS END=229477942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:5:0,6,90:0,15,194:3,0 chr1 229477943 . C . PASS END=229477953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:4,0 chr1 229477954 . G . LowGQ END=229477955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,104:3,0 chr1 229477956 . T . PASS END=229477958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:4,0 chr1 229477959 . A . LowGQ END=229477970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,78:0,0,96:3,0 chr1 229477971 . G . PASS END=229477973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:4,0 chr1 229477974 . G . LowGQ END=229477975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:0,0,82:3,0 chr1 229477976 . G . PASS END=229477978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 229477979 . C . LowGQ END=229477979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:24,0,118:3,0 chr1 229477980 . G . PASS END=229477984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 229477985 . G . LowGQ END=229477985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr1 229477986 . C . PASS END=229477986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 229477987 . A . LowGQ END=229477988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:4:0,0,100:5,0,104:4,0 chr1 229477989 . C . PASS END=229477992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 229477993 . G . PASS END=229477993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 229477994 . T . PASS END=229477994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 229477995 . G . PASS END=229477999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr1 229478000 . G . LowGQ END=229478000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,200:9,0,209:6,0 chr1 229478001 . C . PASS END=229478009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 229478010 . C . PASS END=229478010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 229478011 . C . PASS END=229478021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 229478022 . G . PASS END=229478048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 229478049 . G . PASS END=229478101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:18,0 chr1 229478102 . G . PASS END=229478102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 229478103 . C . PASS END=229478117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,659:0,51,255:18,0 chr1 229478118 . T . PASS END=229478118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 229478119 . G . PASS END=229478123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,643:0,51,255:17,0 chr1 229478124 . A . PASS END=229478124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 229478125 . G . PASS END=229478159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:18,0 chr1 229478160 . G . PASS END=229478170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,495:0,31,255:12,0 chr1 229478171 . G . PASS END=229478192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 229478193 . A . PASS END=229478206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,227:6,0 chr1 229478207 . G . PASS END=229478212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:5:0,9,135:0,15,172:3,0 chr1 229566998 . C . PASS END=229566998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,108,1620:0,138,255:36,0 chr1 229567180 . C . PASS END=229567180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 229567246 . C . PASS END=229567259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,86,255:28,0 chr1 229567260 . G . PASS END=229567260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr1 229567261 . G . PASS END=229567263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 229567264 . G . PASS END=229567264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 229567265 . A . PASS END=229567372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1111:0,82,255:34,0 chr1 229567373 . T . PASS END=229567373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 229567374 . C . PASS END=229567387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 229567388 . A . PASS END=229567389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:24,0 chr1 229567467 . C . PASS END=229567468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:31,0 chr1 229567469 . T . PASS END=229567469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:30,0 chr1 229567470 . T . PASS END=229567480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1141:0,82,255:37,0 chr1 229567481 . G . PASS END=229567482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:36,0 chr1 229567483 . G . PASS END=229567494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:39:0,85,1466:0,85,255:39,0 chr1 229567495 . C . PASS END=229567495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr1 229567496 . G . PASS END=229567506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1361:0,84,255:40,0 chr1 229567507 . T . PASS END=229567508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:73:41:0,73,1299:0,73,255:39,0 chr1 229567509 . T . PASS END=229567604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:42:0,86,1447:0,86,255:40,0 chr1 229567605 . T . PASS END=229567605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1433:0,65,255:31,0 chr1 229567606 . G . PASS END=229567609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,99,1485:0,110,255:35,0 chr1 229567610 . C . PASS END=229567610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1321:0,43,255:26,0 chr1 229567611 . T . PASS END=229567622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:30,0 chr1 229567623 . T . PASS END=229567623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:26,0 chr1 229567624 . C . PASS END=229567624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 229567625 . T . PASS END=229567625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 229567626 . C . PASS END=229567637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 229567638 . C . PASS END=229567641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 229567642 . C . PASS END=229567649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:27:0,51,765:0,64,255:19,0 chr1 229567651 . T . PASS END=229567651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 229567659 . G . PASS END=229567660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 229567662 . G . PASS END=229567662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 229567664 . G . PASS END=229567664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:16,0 chr1 229567735 . G . PASS END=229567735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 229567741 . C . PASS END=229567765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,884:0,61,255:27,0 chr1 229567766 . C . PASS END=229567904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:29:0,83,1141:0,83,255:40,0 chr1 229567905 . T . PASS END=229567905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1075:0,74,255:28,0 chr1 229567906 . T . PASS END=229567920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 229567921 . T . PASS END=229567921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,985:0,63,255:26,0 chr1 229567922 . C . PASS END=229567932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:30,0 chr1 229568012 . C . PASS END=229568012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 229568016 . C . PASS END=229568016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 229568017 . C . PASS END=229568098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,629:0,41,255:19,0 chr1 229568099 . C . PASS END=229568102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 229568103 . A . PASS END=229568120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,676:0,44,255:19,0 chr1 229568121 . T . PASS END=229568121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 229568122 . A . PASS END=229568122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr1 229568123 . G . PASS END=229568123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 229568124 . C . PASS END=229568124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 229568125 . C . PASS END=229568125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 229568126 . C . PASS END=229568148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr1 229568149 . T . PASS END=229568149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr1 229568150 . G . PASS END=229568157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 229568158 . C . PASS END=229568158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 229568159 . G . PASS END=229568162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 229568163 . G . PASS END=229568163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr1 229568164 . A . PASS END=229568169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 229568170 . G . PASS END=229568172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 229568173 . C . PASS END=229568173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 229568174 . G . PASS END=229568174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 229568175 . A . PASS END=229568178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 229568180 . T . PASS END=229568180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 229568300 . C . PASS END=229568300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 229568303 . C . PASS END=229568303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 229568304 . G . PASS END=229568305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 229568306 . T . PASS END=229568306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 229568307 . G . PASS END=229568319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:18,0 chr1 229568320 . G . PASS END=229568324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:23,0 chr1 229568325 . G . PASS END=229568325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 229568326 . A . PASS END=229568365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr1 229568366 . C . PASS END=229568556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,867:0,80,255:40,0 chr1 229568557 . A . PASS END=229568557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:32,0 chr1 229568558 . G . PASS END=229568574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:33,0 chr1 229568575 . T . PASS END=229568616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr1 229568617 . A . PASS END=229568627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,53,255:19,0 chr1 229568720 . A . PASS END=229568720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 229568734 . C . PASS END=229568748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr1 229568749 . G . PASS END=229568752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 229568753 . A . PASS END=229568753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 229568754 . C . PASS END=229568792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,800:0,66,255:26,0 chr1 229568793 . C . PASS END=229568807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:29,0 chr1 229568808 . C . PASS END=229568808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 229568809 . C . PASS END=229568812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 229568813 . C . PASS END=229568828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 229568829 . A . PASS END=229568829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:23,0 chr1 229568830 . C . PASS END=229568849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,854:0,61,255:24,0 chr1 229568850 . C . PASS END=229568850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:22,0 chr1 229568851 . T . PASS END=229568851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:21,0 chr1 229568852 . T . PASS END=229568852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,845:0,44,255:21,0 chr1 229568853 . C . PASS END=229568858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 229568859 . A . PASS END=229568859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 229568860 . C . PASS END=229568860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 229568861 . A . PASS END=229568862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,821:0,44,255:23,0 chr1 229569803 . A G, 153.59 PASS DP=37;MQ=248.47;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,37,0:1.000,0.000:37:0,20,0:0,17,0:104:191,107,0,291,291,291:255,111,0:0,0:1.5359e+02,1.0359e+02,0.0000e+00,2.8836e+02,3.2313e+02,2.9137e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,16,21:0,0,25,12:229569803 chr1 229577651 . T . PASS END=229577769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:38:0,81,1215:0,101,255:40,0 chr1 229577770 . A . PASS END=229577787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr1 229577798 . A . PASS END=229577798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 229580661 . C . PASS END=229580749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:66:0,120,1800:0,161,255:40,0 chr1 229584873 . T . PASS END=229584913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:67:0,120,1800:0,130,255:40,0 chr1 229584914 . A . PASS END=229584914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,7:70:72:70:0,72,2059:0,72,255:40,0 chr1 229584915 . T . PASS END=229584937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:63:0,120,1800:0,162,255:40,0 chr1 229586272 . C . PASS END=229586352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:85:0,120,1800:0,235,255:40,0 chr1 229588272 . A . PASS END=229588390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1186:0,83,255:40,0 chr1 229593908 . C . PASS END=229594043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:97:42:0,97,1499:0,97,255:40,0 chr1 229596358 . C . PASS END=229596501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:31:0,80,1155:0,80,255:40,0 chr1 229596502 . A . PASS END=229596502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:28,0 chr1 229596503 . A . PASS END=229596505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 229596506 . T . PASS END=229596506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 229596507 . C . PASS END=229596516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1016:0,87,255:29,0 chr1 229599290 . C . PASS END=229599290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 229599291 . T . PASS END=229599291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 229599292 . G . PASS END=229599292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 229599293 . A . PASS END=229599293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 229599294 . T . PASS END=229599299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 229599300 . A . PASS END=229599300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:28,0 chr1 229599301 . A . PASS END=229599301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,89,255:29,0 chr1 229599302 . C . PASS END=229599302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr1 229599303 . T . PASS END=229599388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:29:0,83,1048:0,83,255:40,0 chr1 229599389 . T . PASS END=229599389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr1 229599390 . A . PASS END=229599390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 229599391 . G . PASS END=229599395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1050:0,90,255:30,0 chr1 229599396 . G . PASS END=229599404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,74,255:28,0 chr1 229599405 . A . PASS END=229599409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:28:0,48,720:0,84,255:18,0 chr1 229599410 . C . PASS END=229599423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:13:0,33,495:0,39,255:13,0 chr1 229600371 . G . PASS END=229600386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,928:0,84,255:39,0 chr1 229600387 . A . PASS END=229600387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1290:0,70,255:36,0 chr1 229600388 . T . PASS END=229600555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:39:0,101,1372:0,101,255:40,0 chr1 229600556 . G . PASS END=229600556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1845:0,79,255:40,0 chr1 229600557 . C . PASS END=229600571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:93:43:0,93,1395:0,103,255:40,0 chr1 229600572 . T . PASS END=229600572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1389:0,52,255:30,0 chr1 229600573 . C . PASS END=229600573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1451:0,82,255:32,0 chr1 229600574 . T . PASS END=229600574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1333:0,51,255:31,0 chr1 229600575 . C . PASS END=229600575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:32,0 chr1 229600576 . A . PASS END=229600578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:38:0,93,1395:0,101,255:32,0 chr1 229600579 . C . PASS END=229600580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:71:34:0,71,1218:0,71,255:30,0 chr1 229600581 . G . PASS END=229600581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr1 229600582 . G . PASS END=229600583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:29,0 chr1 229600584 . G . PASS END=229600588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1074:0,60,255:28,0 chr1 229600589 . A . PASS END=229600590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:32:0,44,1109:0,44,255:25,0 chr1 229600591 . T . PASS END=229600593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:31:0,60,1080:0,60,255:26,0 chr1 229600594 . C . PASS END=229600595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1102:0,54,255:26,0 chr1 229600596 . T . PASS END=229600596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 229600597 . T . PASS END=229600597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr1 229600598 . C . PASS END=229600598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 229600599 . G . PASS END=229600599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,906:0,29,255:23,0 chr1 229600600 . G . PASS END=229600600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr1 229600601 . A . PASS END=229600601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:23,0 chr1 229600602 . T . PASS END=229600605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:24,0 chr1 229600606 . A . PASS END=229600606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr1 229600607 . C . PASS END=229600607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,947:0,32,255:22,0 chr1 229600608 . C . PASS END=229600608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:23,0 chr1 229600609 . A . PASS END=229600609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:21,0 chr1 229600610 . G . PASS END=229600614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:41:24:0,41,839:0,41,255:21,0 chr1 229600615 . A . PASS END=229600615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 229600616 . C . PASS END=229600616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:21,0 chr1 229600617 . T . PASS END=229600617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 229600618 . T . PASS END=229600618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 229600619 . G . PASS END=229600619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,814:0,28,255:20,0 chr1 229600620 . T . PASS END=229600621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 229600622 . G . PASS END=229600622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr1 229601167 . C . PASS END=229601266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,168,255:40,0 chr1 229602381 . C . PASS END=229602503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,99,1435:0,99,255:40,0 chr1 229606327 . C . PASS END=229606501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1205:0,86,255:40,0 chr1 229606502 . A . PASS END=229606516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:26:0,63,945:0,78,255:25,0 chr1 229606517 . A . PASS END=229606517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:20,0 chr1 229606518 . C . PASS END=229606523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 229606524 . A . PASS END=229606524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 229606525 . A . PASS END=229606525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 229606526 . C . PASS END=229606529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,836:0,53,255:19,0 chr1 229606530 . C . PASS END=229606532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 229606533 . G . PASS END=229606548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,53,255:18,0 chr1 229606549 . A . PASS END=229606549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:16,0 chr1 229606550 . A . PASS END=229606551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 229611385 . T . PASS END=229611479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,129,255:40,0 chr1 229613344 . C . PASS END=229613507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,1011:0,81,255:40,0 chr1 229619801 . C . PASS END=229619892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,149,255:40,0 chr1 229622118 . C . PASS END=229622124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,138,255:40,0 chr1 229622125 . T . PASS END=229622161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,101,1800:0,101,255:40,0 chr1 229622162 . A G, 46.48 PASS DP=63;MQ=250.00;MQRankSum=6.666;ReadPosRankSum=3.056;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,25,0:0.397,0.000:63:17,14,0:21,11,0:46:81,0,50,894,1298,2192:255,0,255:35,0:4.6481e+01,1.1934e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,18,16,9:19,19,9,16 chr1 229622163 . G . PASS END=229622199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,140,255:40,0 chr1 229622200 . A . PASS END=229622275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:97:45:0,97,1668:0,97,255:40,0 chr1 229623213 . C . PASS END=229623215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr1 229623216 . G . PASS END=229623216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr1 229623217 . T . PASS END=229623300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:31:0,83,1149:0,83,255:40,0 chr1 229623301 . A . PASS END=229623331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1260:0,81,255:37,0 chr1 229623332 . G . PASS END=229623337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,95,255:26,0 chr1 229623338 . T C, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.480;ReadPosRankSum=1.355;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:8,4,0:6,10,0:48:85,0,50,501,501,1001:255,0,255:12,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,10,4:8,6,8,6 chr1 229623339 . G . PASS END=229623347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:24,0 chr1 229623348 . T . PASS END=229623360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,59,255:20,0 chr1 229625702 . C . PASS END=229625849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:35:0,88,1100:0,88,255:40,0 chr1 229631242 . C . PASS END=229631312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:90:0,120,1800:0,255,255:40,0 chr1 229631639 . C . PASS END=229631794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:87:42:0,87,1401:0,87,255:40,0 chr1 229633883 . T . PASS END=229633892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:26,0 chr1 229633893 . C . PASS END=229633909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr1 229633910 . T . PASS END=229633910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr1 229633911 . C . PASS END=229633918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 229633919 . A . PASS END=229633919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 229633920 . G . PASS END=229633964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1180:0,86,255:36,0 chr1 229633965 . G . PASS END=229633965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 229633966 . G . PASS END=229633994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1202:0,86,255:34,0 chr1 229633995 . C . PASS END=229634013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 229634014 . T . PASS END=229634014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 229634015 . T . PASS END=229634017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 229634018 . T . PASS END=229634025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,784:0,55,255:19,0 chr1 229634026 . C . PASS END=229634026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 229634027 . T . PASS END=229634047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,675:0,41,255:19,0 chr1 229634048 . T . PASS END=229634048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 229634049 . C . PASS END=229634053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,576:0,45,255:16,0 chr1 229635431 . C . PASS END=229635565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,85,255:40,0 chr1 229636503 . C . PASS END=229636610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,105,1575:0,125,255:40,0 chr1 229637746 . C . PASS END=229637849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,135,255:40,0 chr1 229641787 . C . PASS END=229641905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:89:38:0,89,1437:0,89,255:40,0 chr1 229643815 . C . PASS END=229643818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 229643819 . A . PASS END=229643819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 229643820 . G . PASS END=229643829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:17,0 chr1 229643830 . C . PASS END=229643830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:14,0 chr1 229643831 . T . PASS END=229643841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 229643842 . A . PASS END=229643842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr1 229643843 . C . PASS END=229643845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 229643846 . G . PASS END=229643846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 229643847 . C . PASS END=229643859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr1 229643860 . G . PASS END=229643860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 229643861 . G . PASS END=229643867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 229643868 . G . PASS END=229643869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 229643870 . C . PASS END=229643902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,629:0,44,255:18,0 chr1 229643903 . C . PASS END=229643904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 229643905 . G . PASS END=229643930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 229643931 . T . PASS END=229643931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 229643932 . C . PASS END=229643934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 229643935 . G . PASS END=229643935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 229643936 . C . PASS END=229643943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr1 229643944 . C . PASS END=229643987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 229643988 . T . PASS END=229643996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 229653926 . T . PASS END=229654157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:88:39:0,88,1461:0,88,255:40,0 chr1 229654588 . C . PASS END=229654622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,168,255:40,0 chr1 229657339 . C . PASS END=229657382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,117,1775:0,117,255:40,0 chr1 229661683 . C . PASS END=229661709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,629:0,40,255:19,0 chr1 229661710 . C . PASS END=229661713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 229661714 . A . PASS END=229661714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr1 229661715 . G . PASS END=229661739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr1 229661740 . G . PASS END=229661740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 229661741 . G . PASS END=229661741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 229661742 . A . PASS END=229661743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 229661744 . G . PASS END=229661747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr1 229661748 . G . PASS END=229661748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 229661749 . C . PASS END=229661758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:25,0 chr1 229661759 . G . PASS END=229661764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr1 229661765 . T . PASS END=229661774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr1 229661775 . C . PASS END=229661777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 229661778 . T . PASS END=229661779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 229661780 . G . PASS END=229661782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 229661783 . T . PASS END=229661796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 229661797 . C . PASS END=229661797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 229661798 . A . PASS END=229661798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 229661799 . G . PASS END=229661801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 229661802 . G . PASS END=229661804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 229661805 . G . PASS END=229661806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 229661807 . G . PASS END=229661825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 229661826 . A . PASS END=229661826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 229661827 . T . PASS END=229661827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 229661828 . G . PASS END=229661842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:17:0,51,651:0,51,255:18,0 chr1 229661843 . G . PASS END=229661843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 229661844 . C . PASS END=229661858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,613:0,48,255:17,0 chr1 229661859 . G . PASS END=229661859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr1 229661860 . G . PASS END=229661863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 229662976 . C . PASS END=229663017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:42:0,85,1440:0,85,255:40,0 chr1 229663018 . T . PASS END=229663022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:60:38:0,60,900:0,114,255:26,0 chr1 229663023 . G . PASS END=229663039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:48:34:0,48,720:0,94,255:19,0 chr1 229663040 . T . PASS END=229663048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:33:34:0,33,495:0,69,255:13,0 chr1 229663049 . A . PASS END=229663051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:21:35:0,21,315:0,89,255:9,0 chr1 229663052 . G . PASS END=229663055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:15:34:0,15,225:0,102,255:5,0 chr1 229665946 . C . PASS END=229666148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:36:0,99,1413:0,101,255:40,0 chr1 229666149 . A . PASS END=229666150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:36:0,61,1143:0,61,255:35,0 chr1 229666151 . C . PASS END=229666152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 229666153 . C . PASS END=229666153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1094:0,41,255:26,0 chr1 229666154 . C . PASS END=229666155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 229667383 . C . PASS END=229667383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 229667384 . G . PASS END=229667384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 229667385 . T . PASS END=229667385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr1 229667386 . T . PASS END=229667388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 229667389 . A . PASS END=229667389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:26,0 chr1 229667390 . A . PASS END=229667392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 229667393 . C . PASS END=229667394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 229667395 . G . PASS END=229667408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr1 229667409 . T . PASS END=229667409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 229667410 . C . PASS END=229667414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 229667415 . A . PASS END=229667415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 229667416 . G . PASS END=229667421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 229667422 . A . PASS END=229667422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:27,0 chr1 229667423 . G . PASS END=229667423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 229667424 . A . PASS END=229667424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:28,0 chr1 229667425 . G . PASS END=229667426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 229667427 . C . PASS END=229667429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1070:0,57,255:29,2 chr1 229667430 . C . PASS END=229667439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1202:0,83,255:28,0 chr1 229667440 . C . PASS END=229667440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 229667441 . C . PASS END=229667443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 229667444 . T . PASS END=229667478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 229675203 . C . PASS END=229675209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:24,0 chr1 229675210 . G . PASS END=229675212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 229675213 . T . PASS END=229675213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:26,0 chr1 229675214 . A . PASS END=229675218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:28,0 chr1 229675219 . A . PASS END=229675219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 229675220 . A . PASS END=229675224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 229675225 . G . PASS END=229675225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 229675226 . A . PASS END=229675329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1117:0,80,255:40,0 chr1 229675330 . G . PASS END=229675338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,948:0,70,255:25,0 chr1 229676353 . T . PASS END=229676367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:37:0,90,1356:0,90,255:40,0 chr1 229676368 . A . PASS END=229676368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1340:0,57,255:40,0 chr1 229676369 . G . PASS END=229676495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:34:0,84,1260:0,86,255:40,0 chr1 229676496 . C . PASS END=229676499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 229677984 . C . PASS END=229678064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,111,1336:0,111,255:40,0 chr1 229678065 . C . PASS END=229678101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:41:0,84,1260:0,94,255:40,0 chr1 229678102 . T G, 48.22 PASS DP=42;MQ=243.97;MQRankSum=3.088;ReadPosRankSum=1.970;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,18,0:0.429,0.000:42:11,11,0:13,7,0:47:83,0,50,630,847,1477:255,0,255:18,0:4.8216e+01,8.7237e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,13,9,9:10,14,8,10 chr1 229678103 . T . PASS END=229678112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1155:0,90,255:30,0 chr1 229678113 . A . PASS END=229678113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 229678114 . A . PASS END=229678114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 229678115 . A . PASS END=229678115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 229678116 . A . PASS END=229678118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 229683246 . C . PASS END=229683263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr1 229683264 . G A, 97.69 PASS DP=17;MQ=204.13;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,11,0:0,6,0:48:135,51,0,235,235,235:255,51,0:0,0:9.7694e+01,4.7694e+01,7.3776e-05,2.3246e+02,2.6723e+02,2.3547e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,15,2:0,0,9,8 chr1 229683265 . G . PASS END=229683266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 229683267 . A . PASS END=229683267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 229683268 . G . PASS END=229683279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:19,0 chr1 229683280 . G . PASS END=229683281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 229683282 . C . PASS END=229683287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 229683288 . C . PASS END=229683289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 229683290 . C . PASS END=229683290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 229683291 . A . PASS END=229683301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:25,0 chr1 229683302 . T . PASS END=229683320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,893:0,75,255:26,0 chr1 229683321 . C . PASS END=229683407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1094:0,83,255:38,0 chr1 229683408 . G . PASS END=229683408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:31,0 chr1 229683409 . G . PASS END=229683422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:32,0 chr1 229683423 . T . PASS END=229683423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,957:0,57,255:27,0 chr1 229683424 . C . PASS END=229683426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 229683427 . A . PASS END=229683448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,945:0,65,255:26,0 chr1 229684981 . C . PASS END=229685124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,102,1338:0,103,255:40,0 chr1 229685125 . G . PASS END=229685148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:33:0,90,1350:0,99,255:40,0 chr1 229685149 . T . PASS END=229685161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:26:0,74,1084:0,74,255:26,0 chr1 229685162 . C T, 49.72 PASS DP=26;MQ=234.28;MQRankSum=1.260;ReadPosRankSum=0.334;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:10,8,0:4,4,0:48:84,0,50,429,472,901:255,0,255:13,0:4.9725e+01,6.8081e-05,5.3000e+01,4.2909e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,5,7:7,7,5,7 chr1 229685163 . G . PASS END=229685181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr1 229693883 . C . PASS END=229693890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr1 229693891 . C . PASS END=229693894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 229693895 . G . PASS END=229693906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:24,0 chr1 229693907 . A . PASS END=229693907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 229693908 . C . PASS END=229693913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr1 229693914 . C . PASS END=229693921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 229693922 . G . PASS END=229693922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr1 229693923 . C . PASS END=229693923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 229693924 . T . PASS END=229693937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 229693938 . G . PASS END=229693938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:25,0 chr1 229693939 . A . PASS END=229693952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:26,0 chr1 229693953 . G . PASS END=229693953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:17,0 chr1 229693954 . G . PASS END=229693968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:20:0,41,630:0,41,255:19,0 chr1 229693969 . T . PASS END=229693969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 229693970 . T . PASS END=229693970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:12,0 chr1 229693971 . G . PASS END=229693976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:16:0,30,450:0,32,255:12,0 chr1 229693977 . G . PASS END=229693977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:9,0 chr1 229693978 . G . PASS END=229694002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 229694003 . A . PASS END=229694004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:7,0 chr1 229694005 . G . PASS END=229694006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:18:14:0,18,270:0,42,255:6,0 chr1 229694007 . C . PASS END=229694012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:7,0 chr1 229694013 . C . PASS END=229694040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr1 229694041 . C . PASS END=229694060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr1 229694061 . G . PASS END=229694087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 229694088 . A . PASS END=229694123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr1 229694124 . C . LowGQ END=229694241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,39:3,0 chr1 229694242 . C . PASS END=229694271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:6,0 chr1 229694272 . A . LowGQ END=229694273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,114:0,0,129:5,0 chr1 229694274 . C . PASS END=229694284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 229694285 . A . PASS END=229694285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 229694286 . C . PASS END=229694293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 229694294 . C . PASS END=229694295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr1 229694296 . C . PASS END=229694303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 229694304 . C . PASS END=229694304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr1 229694305 . G . PASS END=229694331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 229694332 . A . PASS END=229694332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 229694333 . G . PASS END=229694347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 229694348 . C . PASS END=229694348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr1 229694349 . A . PASS END=229694367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 229694368 . A . PASS END=229694369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 229694370 . C . PASS END=229694370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 229694371 . C . PASS END=229694396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr1 229694397 . C . PASS END=229694397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr1 229694398 . A . PASS END=229694399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr1 229730044 . T . PASS END=229730125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,496:0,41,255:19,0 chr1 229730126 . A . PASS END=229730127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 229730128 . C . PASS END=229730147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:18,0 chr1 229730148 . C . PASS END=229730155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 229730156 . C . PASS END=229730161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 229730162 . G . PASS END=229730163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 229730164 . G . PASS END=229730227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,546:0,40,255:19,0 chr1 229730228 . G . PASS END=229730228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 229730229 . A . PASS END=229730234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 229730235 . A . PASS END=229730235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 229730236 . G . PASS END=229730242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 229730243 . A . PASS END=229730243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 229730244 . A . PASS END=229730308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,598:0,40,255:19,0 chr1 229730309 . A . PASS END=229730309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr1 229730310 . G . PASS END=229730319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 229730320 . G . PASS END=229730320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr1 229730321 . G . PASS END=229730323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 229730324 . A . PASS END=229730324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 229730325 . A . PASS END=229730330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr1 229730331 . A . PASS END=229730335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 229730336 . T . PASS END=229730336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 229730337 . T . PASS END=229730345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 229730346 . G . PASS END=229730346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 229730347 . G . PASS END=229730377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 229730378 . T . PASS END=229730378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr1 229730379 . T . PASS END=229730384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr1 229730385 . A . PASS END=229730385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,356:0,19,255:11,0 chr1 229730386 . A . PASS END=229730388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 229730389 . G . PASS END=229730393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,405:0,20,255:9,0 chr1 229730394 . G . PASS END=229730414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 229730415 . G . PASS END=229730429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 229730430 . T . PASS END=229730430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 229730431 . C . PASS END=229730431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 229730432 . A . PASS END=229730434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 229730435 . G . PASS END=229730451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 229730452 . G A, 97.25 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,11,0:0,6,0:47:135,50,0,600,50,600:255,51,0:0,0:9.7248e+01,4.7248e+01,8.1800e-05,4.5000e+02,8.2018e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,8:0,0,9,8 chr1 229730453 . C . PASS END=229730464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:17,0 chr1 229730465 . A . PASS END=229730465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:16,0 chr1 229730466 . C . PASS END=229730482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 229730483 . C . PASS END=229730483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 229730484 . C . PASS END=229730484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 229730485 . C . PASS END=229730489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:22,0 chr1 229730490 . C . PASS END=229730509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,762:0,66,255:22,0 chr1 229730510 . T . PASS END=229730510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 229730511 . G . PASS END=229730513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 229730514 . A . PASS END=229730514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 229730515 . T . PASS END=229730516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,828:0,75,255:25,0 chr1 229730517 . T . PASS END=229730517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,795:0,44,255:24,0 chr1 229730518 . G . PASS END=229730528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:25:0,68,925:0,68,255:26,0 chr1 229730529 . C . PASS END=229730534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:27,0 chr1 229730535 . C . PASS END=229730535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 229730536 . C . PASS END=229730536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 229730537 . A . PASS END=229730537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 229730538 . G . PASS END=229730539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr1 229730540 . T . PASS END=229730540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr1 229730541 . G . PASS END=229730557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1119:0,83,255:30,0 chr1 229730558 . A . PASS END=229730558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 229730559 . G . PASS END=229730606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,92,255:33,0 chr1 229730607 . A . PASS END=229730607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr1 229730608 . C . PASS END=229730610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1247:0,99,255:33,0 chr1 229730611 . G . PASS END=229730611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:32,0 chr1 229730612 . C . PASS END=229730623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1249:0,99,255:36,0 chr1 229730624 . A . PASS END=229730624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 229730625 . G . PASS END=229730796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,93,255:40,0 chr1 229730797 . C . PASS END=229730814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:26:0,71,1000:0,71,255:26,0 chr1 229730815 . C . PASS END=229730815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr1 229730816 . G . PASS END=229730838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr1 229730839 . A . PASS END=229730840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 229730841 . C . PASS END=229730841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:21,0 chr1 229737936 . T . PASS END=229738119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:39:0,95,1322:0,95,255:40,0 chr1 229738120 . T . PASS END=229738151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1776:0,120,255:40,0 chr1 229738152 . G . PASS END=229738152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:76:53:0,76,1598:0,76,255:40,0 chr1 229738153 . G . PASS END=229738155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:89:52:0,89,1562:0,89,255:40,0 chr1 229738156 . G . PASS END=229738156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:41:53:0,41,1484:0,41,255:40,0 chr1 229738157 . G . PASS END=229738157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:75:53:0,75,1443:0,75,255:40,0 chr1 229738158 . C . PASS END=229738169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,150,255:40,0 chr1 229738170 . T G, 194.47 PASS DP=50;MQ=249.26;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,24,0:0,25,0:144:232,147,0,1885,147,1885:255,150,0:0,0:1.9447e+02,1.4447e+02,0.0000e+00,4.5000e+02,1.7924e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,29:0,0,27,22 chr1 229738171 . C . PASS END=229738235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,125,255:40,0 chr1 229738236 . G A, 200.49 PASS DP=51;MQ=245.34;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,27,0:0,24,0:150:238,153,0,1965,153,1965:255,153,0:0,0:2.0049e+02,1.5049e+02,0.0000e+00,4.5000e+02,1.8526e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,27:0,0,32,19 chr1 229738237 . G . PASS END=229738273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:46:0,120,1800:0,128,255:40,0 chr1 229738274 . T . PASS END=229738666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:86:31:0,86,1255:0,86,255:40,0 chr1 229743521 . A . PASS END=229743554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,175,255:40,0 chr1 229745853 . C . PASS END=229745957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,102,1607:0,102,255:40,0 chr1 229749975 . T . PASS END=229749977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 229749978 . G . PASS END=229749980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 229749981 . T . PASS END=229749981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 229749982 . G . PASS END=229749986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 229749987 . C . PASS END=229749996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 229749997 . G . PASS END=229750004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 229750005 . A . PASS END=229750005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,915:0,67,255:27,0 chr1 229750006 . A . PASS END=229750007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 229750008 . A . PASS END=229750008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,952:0,68,255:27,0 chr1 229750009 . G . PASS END=229750009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 229750010 . G . PASS END=229750010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 229750011 . A . PASS END=229750012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 229750013 . A . PASS END=229750013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 229750014 . A . PASS END=229750025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 229750026 . T . PASS END=229750026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr1 229750027 . G . PASS END=229750029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 229750030 . T . PASS END=229750031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 229750032 . T . PASS END=229750125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1220:0,81,255:39,0 chr1 229750126 . A . PASS END=229750126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1279:0,64,255:28,0 chr1 229750127 . G . PASS END=229750195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1080:0,80,255:38,0 chr1 229750196 . C . PASS END=229750196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr1 229750197 . C . PASS END=229750200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 229750201 . T . PASS END=229750204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 229750205 . T . PASS END=229750205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,930:0,35,255:23,0 chr1 229750206 . C . PASS END=229750211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,931:0,64,255:25,0 chr1 229750212 . G . PASS END=229750217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 229750218 . C . PASS END=229750229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:21,0 chr1 229763381 . A . PASS END=229763506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:40:0,93,1395:0,93,255:40,0 chr1 229768016 . G . PASS END=229768192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:58:0,120,1800:0,151,255:40,0 chr1 229770664 . A . PASS END=229770666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:18,0 chr1 229770667 . A . PASS END=229770669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr1 229770670 . A . PASS END=229770670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 229770671 . A . PASS END=229770681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,793:0,69,255:26,0 chr1 229770682 . G . PASS END=229770690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr1 229770691 . T . PASS END=229770691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 229770692 . C . PASS END=229770703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 229770704 . C . PASS END=229770704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 229770705 . C . PASS END=229770712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,973:0,87,255:30,0 chr1 229770713 . A . PASS END=229770713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr1 229770714 . C . PASS END=229770745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1156:0,80,255:32,0 chr1 229770746 . T . PASS END=229770766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:27:0,67,955:0,67,255:26,0 chr1 229770767 . C . PASS END=229770781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1094:0,84,255:30,0 chr1 229770782 . C . PASS END=229770784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 229770785 . A . PASS END=229770787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 229770788 . A . PASS END=229770788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 229770789 . G . PASS END=229770799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr1 229770800 . T . PASS END=229770800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 229770801 . G . PASS END=229770805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 229770806 . T . PASS END=229770901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,884:0,61,255:26,0 chr1 229770902 . T . PASS END=229770902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,758:0,30,255:22,0 chr1 229770903 . C . PASS END=229770943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,787:0,66,255:24,0 chr1 229770944 . G . PASS END=229770944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 229770945 . G . PASS END=229770979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr1 229770980 . T . PASS END=229770982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 229770983 . T . PASS END=229770983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 229770984 . G . PASS END=229770984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 229770985 . A . PASS END=229771014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,71,255:26,0 chr1 229771015 . C . PASS END=229771015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:23,0 chr1 229771016 . A . PASS END=229771032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:27,0 chr1 229771033 . C . PASS END=229771038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 229771039 . C . PASS END=229771041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 229771042 . G . PASS END=229771049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 229771050 . C . PASS END=229771050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 229771051 . C . PASS END=229771053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr1 229771054 . G . PASS END=229771054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 229771055 . A . PASS END=229771056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 229771057 . A . PASS END=229771057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 229771058 . T . PASS END=229771059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 229771060 . A . PASS END=229771061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:29,0 chr1 229771062 . G . PASS END=229771064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 229771065 . T . PASS END=229771075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,994:0,63,255:26,0 chr1 229771076 . C . PASS END=229771077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:27,0 chr1 229771078 . A . PASS END=229771079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 229771080 . G . PASS END=229771087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 229771088 . G . PASS END=229771120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr1 229771121 . A . PASS END=229771121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,833:0,44,255:24,0 chr1 229771122 . C . PASS END=229771122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 229771123 . A . PASS END=229771123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 229771124 . A . PASS END=229771125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,817:0,72,255:24,0 chr1 229771126 . G . PASS END=229771126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 229771127 . A . PASS END=229771147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr1 229771148 . A . PASS END=229771180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,615:0,47,255:19,0 chr1 229771181 . T . PASS END=229771188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:38:15:0,38,585:0,38,255:14,0 chr1 229771189 . C . PASS END=229771200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr1 229771201 . G . PASS END=229771201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 229771202 . T . PASS END=229771202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 229771203 . G . PASS END=229771207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 229771208 . A . PASS END=229771212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:19,0 chr1 229771213 . C . PASS END=229771214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 229771215 . G . PASS END=229771215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 229771216 . G . PASS END=229771217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 229771218 . T . PASS END=229771218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 229771219 . G . PASS END=229771222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr1 229771223 . C . PASS END=229771224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 229771225 . G . PASS END=229771226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 229771227 . C . PASS END=229771227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:23,0 chr1 229771228 . T . PASS END=229771231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:25:0,42,839:0,42,255:25,0 chr1 229771232 . G . PASS END=229771232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 229771233 . T . PASS END=229771235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 229771236 . A . PASS END=229771236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 229771237 . G . PASS END=229771248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,959:0,87,255:29,0 chr1 229771249 . A . PASS END=229771249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 229771250 . C . PASS END=229771253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:29,0 chr1 229771254 . T . PASS END=229771254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr1 229771255 . G . PASS END=229771325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1026:0,83,255:40,0 chr1 229771326 . T . PASS END=229771326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1220:0,62,255:37,0 chr1 229771327 . C . PASS END=229771340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1294:0,81,255:40,0 chr1 229771341 . T . PASS END=229771341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1275:0,75,255:35,0 chr1 229771342 . C . PASS END=229771368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1240:0,84,255:39,0 chr1 229771369 . A . PASS END=229771369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1164:0,42,255:32,0 chr1 229771370 . T . PASS END=229771459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1209:0,81,255:40,0 chr1 229771460 . T . PASS END=229771460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr1 229771461 . G . PASS END=229771484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:32,0 chr1 229771485 . C . PASS END=229771485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 229771486 . G . PASS END=229771494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 229771495 . A . PASS END=229771495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 229771496 . G . PASS END=229771497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 229771498 . A . PASS END=229771498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 229771499 . T . PASS END=229771500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 229771501 . C . PASS END=229771518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:26:0,71,1023:0,71,255:26,0 chr1 229771519 . T . PASS END=229771524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 229771525 . T . PASS END=229771525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 229771526 . T . PASS END=229771529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr1 229771530 . C . PASS END=229771531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 229771532 . G . PASS END=229771532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr1 229771533 . C . PASS END=229771545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:25,0 chr1 229771546 . C . PASS END=229771547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,845:0,56,255:21,0 chr1 229771548 . G . PASS END=229771552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,61,255:21,0 chr1 229771553 . T . PASS END=229771569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:44:21:0,44,759:0,44,255:19,0 chr1 229771570 . C . PASS END=229771573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 229771574 . T . PASS END=229771574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 229771575 . A . PASS END=229771582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,868:0,69,255:25,0 chr1 229771583 . G . PASS END=229771583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr1 229771584 . G . PASS END=229771584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 229771585 . T . PASS END=229771590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 229771591 . T . PASS END=229771591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:26,0 chr1 229771592 . G . PASS END=229771593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 229771594 . C . PASS END=229771594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 229771595 . T . PASS END=229771604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr1 229771605 . G . PASS END=229771605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 229771606 . A . PASS END=229771606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 229771607 . T . PASS END=229771609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,926:0,65,255:27,0 chr1 229771610 . C . PASS END=229771612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 229771613 . T . PASS END=229771613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 229771614 . G . PASS END=229771632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:31,0 chr1 229771633 . C . PASS END=229771633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 229771634 . C . PASS END=229771645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1103:0,82,255:30,0 chr1 229771646 . A . PASS END=229771647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr1 229771648 . C . PASS END=229771655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 229771656 . T . PASS END=229771660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1080:0,77,255:26,0 chr1 229771661 . C . PASS END=229771670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 229771671 . T . PASS END=229771671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:26,0 chr1 229771672 . G . PASS END=229771673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 229771674 . C . PASS END=229771680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr1 229771681 . A . PASS END=229771681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:25,0 chr1 229771682 . C . PASS END=229771684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 229771685 . A . PASS END=229771697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 229771698 . A . PASS END=229771698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 229771699 . A . PASS END=229771712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 229771713 . G . PASS END=229771715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 229771716 . T . PASS END=229771717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 229771718 . T . PASS END=229771718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,931:0,46,255:25,0 chr1 229771719 . T . PASS END=229771725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr1 229771726 . G . PASS END=229771726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:23,0 chr1 229771727 . T . PASS END=229771727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,879:0,57,255:22,0 chr1 229771728 . C . PASS END=229771733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 229771734 . G . PASS END=229771736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 229771737 . T . PASS END=229771737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr1 229771738 . T . PASS END=229771742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr1 229771743 . C . PASS END=229771743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 229771744 . A . PASS END=229771747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr1 229771748 . T . PASS END=229771758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,914:0,67,255:27,0 chr1 229771759 . C . PASS END=229771760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1003:0,87,255:29,0 chr1 229771761 . A . PASS END=229771761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 229771762 . C . PASS END=229771764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr1 229771765 . T . PASS END=229771765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr1 229771766 . T . PASS END=229771771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,86,255:29,0 chr1 229771772 . A . PASS END=229771772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 229771773 . A . PASS END=229771774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 229771775 . A . PASS END=229771775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 229771776 . G . PASS END=229771776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:27,0 chr1 229771777 . G . PASS END=229771778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 229771779 . T . PASS END=229771779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:27,0 chr1 229771780 . T . PASS END=229771788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1001:0,84,255:28,0 chr1 229771789 . A . PASS END=229771789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:25,0 chr1 229771790 . T . PASS END=229771819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr1 229771820 . A . PASS END=229771874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,654:0,51,255:19,0 chr1 229771875 . G . PASS END=229771876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 229771877 . C . PASS END=229771940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,504:0,41,255:19,0 chr1 229771941 . C . PASS END=229771941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,643:0,26,255:18,0 chr1 229771942 . T . PASS END=229771944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr1 229771945 . T . PASS END=229771953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 229771954 . G . PASS END=229771954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 229771955 . A . PASS END=229771959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 229771960 . G . PASS END=229771960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 229771961 . A . PASS END=229771977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 229771978 . C . PASS END=229771980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 229771981 . T . PASS END=229771981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 229771982 . C . PASS END=229771992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,676:0,43,255:19,0 chr1 229771993 . C . PASS END=229772000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 229772001 . C . PASS END=229772001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 229772002 . T . PASS END=229772002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 229772003 . G . PASS END=229772003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr1 229772004 . C . PASS END=229772014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:22,0 chr1 229772015 . A . PASS END=229772015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,630:0,49,255:21,0 chr1 229772016 . C . PASS END=229772070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,878:0,61,255:26,0 chr1 229772071 . A . PASS END=229772071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,951:0,54,255:24,0 chr1 229772072 . T . PASS END=229772083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 229772084 . T . PASS END=229772089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 229772090 . G . PASS END=229772090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 229772091 . G . PASS END=229772117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1017:0,84,255:31,0 chr1 229772118 . T . PASS END=229772118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 229772119 . C . PASS END=229772125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1194:0,86,255:31,0 chr1 229772126 . A . PASS END=229772126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:30,0 chr1 229772127 . C . PASS END=229772127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 229772128 . A . PASS END=229772128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr1 229772129 . C . PASS END=229772168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1044:0,80,255:32,0 chr1 229772169 . T . PASS END=229772176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:27:0,74,1078:0,74,255:28,0 chr1 229772177 . T . PASS END=229772183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1141:0,80,255:30,0 chr1 229772184 . G . PASS END=229772186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 229772187 . C . PASS END=229772347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:31:0,80,1147:0,80,255:40,0 chr1 229772348 . C . PASS END=229772348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:66:49:0,66,1424:0,66,255:35,0 chr1 229772349 . A . PASS END=229772349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,114,1710:0,147,255:38,0 chr1 229772350 . G . PASS END=229772350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:64:51:0,64,1501:0,64,255:40,0 chr1 229772351 . C . PASS END=229772479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:44:0,83,1495:0,83,255:40,2 chr1 229772480 . T . PASS END=229772480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1770:0,76,255:40,0 chr1 229772481 . T . PASS END=229772615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1156:0,83,255:40,0 chr1 229772616 . C . PASS END=229772616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:32,0 chr1 229772617 . T . PASS END=229772651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1216:0,95,255:38,0 chr1 229772652 . T . PASS END=229772652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:34,0 chr1 229772653 . G . PASS END=229772655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1311:0,95,255:37,0 chr1 229772656 . C . PASS END=229772681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1267:0,92,255:37,0 chr1 229772682 . A . PASS END=229772682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:28,0 chr1 229772683 . G . PASS END=229772687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1395:0,104,255:32,0 chr1 229772688 . G . PASS END=229772688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1340:0,59,255:30,0 chr1 229772689 . G . PASS END=229772692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:34:0,96,1440:0,102,255:33,0 chr1 229772693 . T G, 150.94 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,20,0:0,15,0:101:189,104,0,289,289,289:255,105,0:0,0:1.5094e+02,1.0094e+02,0.0000e+00,2.8571e+02,3.2048e+02,2.8872e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,18:0,0,16,19 chr1 229772694 . C . PASS END=229772696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:35,0 chr1 229772697 . A . PASS END=229772697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:33,0 chr1 229772698 . A . PASS END=229772725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1274:0,84,255:40,2 chr1 229772726 . A . PASS END=229772726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1451:0,57,255:40,2 chr1 229772727 . A . PASS END=229772730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:41:0,85,1458:0,85,255:40,0 chr1 229772731 . A . PASS END=229772758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1512:0,110,255:40,0 chr1 229772759 . T . PASS END=229772759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1259:0,76,255:35,0 chr1 229772760 . C . PASS END=229772788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,111,1498:0,113,255:40,0 chr1 229772789 . C . PASS END=229772789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:37,0 chr1 229772790 . T . PASS END=229773112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:36:0,80,1252:0,80,255:40,0 chr1 229773113 . T . PASS END=229773113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1792:0,76,255:40,0 chr1 229773114 . T . PASS END=229773115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,115,1807:0,115,255:40,0 chr1 229773116 . T . PASS END=229773116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1782:0,76,255:40,0 chr1 229773117 . T . PASS END=229773117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:37:51:0,37,1676:0,37,255:40,0 chr1 229773118 . G . PASS END=229773440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1109:0,80,255:40,0 chr1 229773441 . C . PASS END=229773441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:31,0 chr1 229773442 . G . PASS END=229773490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1152:0,83,255:38,0 chr1 229773491 . A . PASS END=229773491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:33,0 chr1 229773492 . A . PASS END=229773496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:35,0 chr1 229773497 . A . PASS END=229773497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:32,0 chr1 229773498 . A . PASS END=229773510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1272:0,92,255:35,0 chr1 229773511 . C . PASS END=229773512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1280:0,72,255:31,0 chr1 229773513 . G . PASS END=229773531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:34:0,87,1257:0,89,255:32,0 chr1 229773532 . G . PASS END=229773532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:31,0 chr1 229773533 . T . PASS END=229773574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:32,0 chr1 229773575 . A . PASS END=229773575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr1 229773576 . A . PASS END=229773585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 229773586 . C . PASS END=229773611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,74,255:26,0 chr1 229773612 . G . PASS END=229773625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr1 229773626 . A . PASS END=229773659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 229773660 . G . PASS END=229773660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 229773661 . C . PASS END=229773668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 229773669 . A . PASS END=229773669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr1 229773670 . G . PASS END=229773683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:24,0 chr1 229773684 . G . PASS END=229773684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 229773685 . G . PASS END=229773688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 229773689 . G . PASS END=229773689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr1 229773690 . G . PASS END=229773726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr1 229773727 . C . PASS END=229773727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:26,0 chr1 229773728 . T . PASS END=229773740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 229773741 . C . PASS END=229773751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:26,0 chr1 229773752 . A . PASS END=229773752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 229773753 . C . PASS END=229773755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 229773756 . C . PASS END=229773757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 229773758 . G . PASS END=229773775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,831:0,62,255:22,0 chr1 229773776 . T . PASS END=229773777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 229773778 . T . PASS END=229773785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 229773786 . A . PASS END=229773786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 229773787 . A . PASS END=229773800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,908:0,69,255:24,0 chr1 229773801 . G . PASS END=229773801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 229773802 . C . PASS END=229773802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr1 229773803 . T . PASS END=229773803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr1 229773804 . C . PASS END=229773815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 229773816 . C . PASS END=229773816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 229773817 . C . PASS END=229773818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 229773819 . C . PASS END=229773875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1172:0,83,255:35,0 chr1 229773876 . T . PASS END=229773876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1333:0,75,255:35,2 chr1 229773877 . C . PASS END=229773877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1282:0,48,255:36,2 chr1 229773878 . A . PASS END=229773878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:38,0 chr1 229773879 . G . PASS END=229773994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,101,1231:0,101,255:40,0 chr1 229779280 . A . PASS END=229779286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 229779287 . A . PASS END=229779287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:23,0 chr1 229779288 . A . PASS END=229779288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 229779289 . T . PASS END=229779432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,987:0,81,255:40,0 chr1 229779433 . A . PASS END=229779440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:24,0 chr1 229781606 . G . PASS END=229781611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 229781612 . G . PASS END=229781620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:26,0 chr1 229781621 . G . PASS END=229781653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1049:0,84,255:33,0 chr1 229781654 . C . PASS END=229781654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr1 229781655 . T . PASS END=229781703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1305:0,89,255:36,0 chr1 229781704 . C . PASS END=229781706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 229781707 . A . PASS END=229781716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr1 229783257 . C . PASS END=229783280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,164:5,0 chr1 229783281 . G . PASS END=229783285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:6,0 chr1 229783286 . G . PASS END=229783293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 229783294 . C . PASS END=229783295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr1 229783296 . C . PASS END=229783310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr1 229783311 . C . PASS END=229783311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 229783312 . C . PASS END=229783313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 229783314 . G . PASS END=229783342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:24,0 chr1 229783343 . G . PASS END=229783343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 229783344 . C . PASS END=229783410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,870:0,72,255:25,0 chr1 229783411 . C . PASS END=229783411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 229783412 . T . PASS END=229783418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 229783419 . C . PASS END=229783419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 229783420 . A . PASS END=229783424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 229783425 . A . PASS END=229783425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 229783426 . A . PASS END=229783426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr1 229783427 . G . PASS END=229783427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 229783428 . C . PASS END=229783432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 229783433 . G . PASS END=229783456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:16,0 chr1 229783457 . G . PASS END=229783457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 229783458 . C . PASS END=229783490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,387:0,41,255:17,0 chr1 229783491 . C . PASS END=229783495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 229783496 . T . PASS END=229783499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 229786982 . G . PASS END=229787069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:70:0,120,1800:0,188,255:40,0 chr1 229789996 . G . PASS END=229790006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,864:0,72,255:26,0 chr1 229790007 . G . PASS END=229790007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 229790008 . A . PASS END=229790010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 229790011 . T . PASS END=229790018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 229790019 . G . PASS END=229790047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1421:0,87,255:40,0 chr1 229790048 . A G, 175.96 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,22,0:0,21,0:126:214,129,0,1615,129,1615:255,129,0:0,0:1.7596e+02,1.2596e+02,0.0000e+00,4.5000e+02,1.6073e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,15:0,0,29,14 chr1 229790049 . A . PASS END=229790081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:43:0,93,1427:0,93,255:40,0 chr1 229790082 . T . PASS END=229790082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:75:42:0,75,1119:0,75,255:36,0 chr1 229790083 . T . PASS END=229790085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,120,1800:0,123,255:40,0 chr1 229790086 . C . PASS END=229790115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1287:0,87,255:40,0 chr1 229790116 . A . PASS END=229790116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1357:0,70,255:31,0 chr1 229790117 . C . PASS END=229790132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1180:0,83,255:32,0 chr1 229790133 . A . PASS END=229790133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 229790134 . A . PASS END=229790135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:29,0 chr1 229794847 . G . PASS END=229794878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,503:0,42,255:16,0 chr1 229794879 . G . PASS END=229794879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 229794880 . C . PASS END=229794889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:17,0 chr1 229794890 . T . PASS END=229794890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr1 229794891 . T . PASS END=229794897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:18,0 chr1 229794898 . A . PASS END=229794910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 229794911 . G . PASS END=229794912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 229794913 . A . PASS END=229794913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 229794914 . T . PASS END=229794985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:29:0,84,1141:0,87,255:40,0 chr1 229794986 . A . PASS END=229794986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1341:0,70,255:31,0 chr1 229794987 . T . PASS END=229794988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 229794989 . A . PASS END=229795021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr1 229795022 . G . PASS END=229795022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 229795023 . A . PASS END=229795023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 229795024 . G . PASS END=229795024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,864:0,43,255:26,0 chr1 229795025 . A . PASS END=229795025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 229795026 . G . LowGQ END=229795026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,713:43,0,255:23,0 chr1 229795027 . A . PASS END=229795028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 229795029 . A . PASS END=229795030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1100:0,77,255:26,0 chr1 229795031 . G . PASS END=229795031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,840:0,40,255:24,0 chr1 229795032 . A . PASS END=229795032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 229795033 . T . PASS END=229795033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:20:29:0,20,695:0,20,255:23,0 chr1 229795034 . A . PASS END=229795037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,67,255:26,0 chr1 229795038 . G . PASS END=229795038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,787:0,50,255:20,0 chr1 229795039 . G . PASS END=229795044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,64,255:21,0 chr1 230193814 . A . PASS END=230193825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,120,1800:0,132,255:40,0 chr1 230203028 . A . PASS END=230203029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 230203030 . G . PASS END=230203030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 230203031 . C . PASS END=230203040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr1 230203041 . C . PASS END=230203052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr1 230203053 . T . PASS END=230203053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 230203054 . C . PASS END=230203055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 230203056 . G . PASS END=230203056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 230203057 . C . PASS END=230203069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,484:0,45,255:17,0 chr1 230203070 . T . PASS END=230203070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:14,0 chr1 230203071 . G . PASS END=230203081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 230203082 . A . PASS END=230203082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 230203083 . T . PASS END=230203084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 230203085 . G . PASS END=230203085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 230203086 . C . PASS END=230203105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:15,0 chr1 230203106 . G . PASS END=230203111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr1 230203112 . T . PASS END=230203153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,288:0,27,255:9,0 chr1 230251796 . A . PASS END=230251822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1111:0,80,255:34,0 chr1 230251823 . G A, 47.69 PASS DP=34;MQ=248.63;MQRankSum=4.182;ReadPosRankSum=4.007;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,14,0:0.412,0.000:34:10,5,0:10,9,0:47:82,0,50,501,715,1216:255,0,255:17,0:4.7689e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,6,8:14,6,9,5 chr1 230251824 . C . PASS END=230251828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr1 230263844 . T C, 50.00 PASS DP=20;MQ=249.46;MQRankSum=3.742;ReadPosRankSum=0.265;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,10,0:0.500,0.000:20:7,8,0:3,2,0:48:85,0,50,349,358,707:255,0,255:10,0:5.0000e+01,6.5233e-05,5.3000e+01,3.4923e+02,3.9258e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,3,7:6,4,1,9:230263835 chr1 230294916 . C T, 39.79 PASS DP=45;MQ=250.00;MQRankSum=5.405;ReadPosRankSum=-0.181;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,15,0:0.333,0.000:45:17,10,0:13,5,0:40:75,0,50,505,1071,1577:255,0,255:23,0:3.9789e+01,4.7762e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,15,8,7:14,16,7,8 chr1 230313964 . G . PASS END=230314057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,104,1512:0,104,255:40,0 chr1 230338883 . G . PASS END=230338900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:25,0 chr1 230338901 . A . PASS END=230338901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr1 230338902 . C . PASS END=230338909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 230338910 . A . PASS END=230338918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr1 230338919 . A . PASS END=230338921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr1 230338922 . T . PASS END=230338922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,862:0,64,255:26,0 chr1 230338923 . T . PASS END=230338924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 230338925 . G . PASS END=230338925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 230338926 . A . PASS END=230338933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 230338934 . T . PASS END=230338934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 230338935 . G . PASS END=230338935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr1 230338936 . G . PASS END=230338936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 230338937 . T . PASS END=230338938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 230338939 . C . PASS END=230338939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 230338940 . G . PASS END=230338955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1103:0,90,255:31,0 chr1 230338956 . T . PASS END=230338956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 230338957 . T . PASS END=230338961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr1 230338962 . C . PASS END=230338962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 230338963 . C . PASS END=230338975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 230338976 . A . PASS END=230338976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 230338977 . C . PASS END=230338978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 230338979 . A . PASS END=230338979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 230338980 . G . PASS END=230338988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 230338989 . T . PASS END=230338989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr1 230338990 . G . PASS END=230338990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 230338991 . A . PASS END=230338991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 230338992 . T . PASS END=230338993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 230338994 . A . PASS END=230339031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,68,255:25,0 chr1 230339032 . G . PASS END=230339036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:22:0,48,720:0,53,255:17,0 chr1 230371760 . G . PASS END=230371769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr1 230371770 . A . PASS END=230371781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr1 230371782 . G . PASS END=230371782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 230371783 . T . PASS END=230371788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1124:0,84,255:29,0 chr1 230371789 . T . PASS END=230371789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 230371790 . G . PASS END=230371793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:31,0 chr1 230371794 . G . PASS END=230371794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 230371795 . C . PASS END=230371805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1172:0,93,255:33,0 chr1 230371806 . G . PASS END=230371821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr1 230371822 . A . PASS END=230371824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 230371825 . A . PASS END=230371825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr1 230371826 . A . PASS END=230371845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 230371846 . G . PASS END=230371858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 230372099 . C . PASS END=230372166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:93:41:0,93,1502:0,93,255:40,0 chr1 230372406 . C . PASS END=230372471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,130,255:40,0 chr1 230379052 . G . PASS END=230379077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr1 230379078 . G . PASS END=230379148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1147:0,80,255:37,0 chr1 230379149 . G . PASS END=230379150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 230379151 . C . PASS END=230379156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 230379157 . T . PASS END=230379157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:27,0 chr1 230379158 . G . PASS END=230379160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 230379161 . A . PASS END=230379161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 230379162 . A . PASS END=230379169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 230379170 . G . PASS END=230379173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:25,0 chr1 230381809 . G . PASS END=230381896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:44:0,83,1540:0,83,255:40,0 chr1 230384930 . G . PASS END=230384969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1218:0,89,255:40,0 chr1 230384970 . G . PASS END=230384970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1441:0,71,255:39,0 chr1 230384971 . C . PASS END=230385017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:32:0,87,1305:0,96,255:40,0 chr1 230386203 . A . PASS END=230386303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,131,255:40,0 chr1 230386304 . T . PASS END=230386306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,105,1575:0,143,255:37,0 chr1 230390964 . A . PASS END=230390974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1142:0,85,255:37,0 chr1 230390975 . C . PASS END=230390975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:35,0 chr1 230390976 . G . PASS END=230390979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1426:0,101,255:38,0 chr1 230390980 . G . PASS END=230390980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:37,0 chr1 230390981 . T . PASS END=230391076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1305:0,84,255:40,0 chr1 230391077 . A . PASS END=230391090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:23,0 chr1 230398319 . A . PASS END=230398323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,986:0,70,255:26,0 chr1 230398324 . C . PASS END=230398392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:30:0,84,1260:0,90,255:40,0 chr1 230398393 . G . PASS END=230398393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:32,0 chr1 230398394 . A . PASS END=230398396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:97:37:0,97,1147:0,97,255:33,0 chr1 230398397 . C . PASS END=230398397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:20:38:0,20,1196:0,20,255:30,0 chr1 230398398 . G . PASS END=230398401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1359:0,83,255:33,0 chr1 230398402 . C . PASS END=230398402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1280:0,70,255:33,0 chr1 230398403 . T . PASS END=230398403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 230398404 . T . PASS END=230398404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1213:0,53,255:33,0 chr1 230398405 . A . LowGQ END=230398405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:0:39:0,0,1147:10,0,255:32,0 chr1 230398406 . T . PASS END=230398406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1388:0,101,255:36,0 chr1 230398407 . G . PASS END=230398407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1235:0,67,255:32,0 chr1 230398408 . G . LowGQ END=230398408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:0:39:0,0,1083:27,0,255:29,0 chr1 230398409 . A . PASS END=230398411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:93:38:0,93,1279:0,93,255:38,0 chr1 230398668 . T . PASS END=230398751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:35:0,92,1218:0,92,255:40,0 chr1 230400987 . G . PASS END=230400988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:18:0,48,720:0,54,255:21,0 chr1 230400989 . T . PASS END=230400992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 230400993 . A . PASS END=230400993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 230400994 . G . PASS END=230400994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 230400995 . A . PASS END=230401001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr1 230401002 . G . PASS END=230401002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 230401003 . G . PASS END=230401003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 230401004 . A . PASS END=230401006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr1 230401007 . T . PASS END=230401007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 230401008 . A . PASS END=230401142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1117:0,81,255:37,0 chr1 230401143 . C . PASS END=230401144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 230401145 . G . PASS END=230401203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1169:0,80,255:36,0 chr1 230401204 . T . PASS END=230401204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:27,0 chr1 230401205 . C . PASS END=230401219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1217:0,86,255:30,0 chr1 230401220 . A . PASS END=230401222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 230401223 . T . PASS END=230401242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 230401243 . T . PASS END=230401258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:25:0,75,933:0,75,255:26,0 chr1 230401259 . C . PASS END=230401259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 230401260 . T . PASS END=230401260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,999:0,71,255:28,0 chr1 230401261 . C . PASS END=230401283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:30,0 chr1 230401284 . A . PASS END=230401285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 230401286 . A . PASS END=230401286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 230401287 . T . PASS END=230401311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,970:0,67,255:26,0 chr1 230401312 . C . PASS END=230401313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 230401314 . G . PASS END=230401314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 230401315 . C . PASS END=230401315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 230401316 . T . PASS END=230401332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:26:0,71,933:0,71,255:26,0 chr1 230401333 . A . PASS END=230401334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 230401335 . C . PASS END=230401381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,906:0,62,255:26,0 chr1 230401382 . G . PASS END=230401383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr1 230401384 . A . PASS END=230401392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:26,0 chr1 230401393 . G . PASS END=230401395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:27,0 chr1 230401396 . T . PASS END=230401439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,856:0,61,255:25,0 chr1 230401440 . A . PASS END=230401440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:23,0 chr1 230401441 . G . PASS END=230401473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,862:0,61,255:25,0 chr1 230401474 . T . PASS END=230401474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr1 230401475 . A . PASS END=230401475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 230401476 . T . PASS END=230401479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,889:0,48,255:26,0 chr1 230401480 . G . PASS END=230401481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:28,0 chr1 230401482 . C . PASS END=230401498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 230401499 . T . PASS END=230401501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:77:29:0,77,1108:0,77,255:28,0 chr1 230401502 . G . PASS END=230401514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1086:0,87,255:29,0 chr1 230401515 . A . PASS END=230401515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 230401516 . T . PASS END=230401522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 230401523 . C . PASS END=230401523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 230401524 . T . PASS END=230401541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:30,0 chr1 230401542 . T . PASS END=230401558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,925:0,68,255:26,0 chr1 230401559 . G . PASS END=230401559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 230401560 . C . PASS END=230401561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 230401562 . T . PASS END=230401562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr1 230401563 . G . PASS END=230401582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,886:0,72,255:25,0 chr1 230401583 . A . PASS END=230401584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 230410191 . G . PASS END=230410229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,841:0,69,255:25,0 chr1 230410230 . G . PASS END=230410237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr1 230410238 . C . PASS END=230410242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 230410243 . C . PASS END=230410243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 230410244 . T . PASS END=230410254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 230410255 . G . PASS END=230410255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr1 230410256 . G . PASS END=230410285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,876:0,61,255:26,0 chr1 230410286 . C . PASS END=230410286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 230410287 . T . PASS END=230410310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,49,255:20,0 chr1 230415049 . A . PASS END=230415062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:24,0 chr1 230415063 . C . PASS END=230415066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 230415067 . G . PASS END=230415067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 230415068 . G . PASS END=230415084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:26,0 chr1 230415085 . C . PASS END=230415087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 230415088 . G . PASS END=230415089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 230415090 . G . PASS END=230415155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1049:0,82,255:33,0 chr1 230415156 . C . PASS END=230415156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 230415157 . C . PASS END=230415170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 230415171 . G . PASS END=230415195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 230415196 . C . PASS END=230415204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr1 230459171 . T . PASS END=230459363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1049:0,81,255:40,0 chr1 230459364 . T . PASS END=230459364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 230459365 . A . PASS END=230459366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 230461056 . T . PASS END=230461062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 230461063 . A . PASS END=230461064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:27,0 chr1 230461065 . T . PASS END=230461071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr1 230461072 . C . PASS END=230461078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:30,0 chr1 230461079 . G A, 136.83 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,12,0:0,18,0:87:175,90,0,1134,90,1134:255,90,0:0,0:1.3683e+02,8.6834e+01,0.0000e+00,4.5000e+02,1.2160e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,12:0,0,16,14 chr1 230461080 . C . PASS END=230461116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:30:0,90,1047:0,90,255:38,0 chr1 230461117 . C . PASS END=230461161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1311:0,95,255:38,0 chr1 230468590 . C . PASS END=230468590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 230468591 . C . PASS END=230468593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 230468594 . C . PASS END=230468594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr1 230468595 . T . PASS END=230468599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 230468600 . C . PASS END=230468600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 230468601 . G . PASS END=230468618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:31,0 chr1 230468619 . A . PASS END=230468619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 230468620 . G . PASS END=230468653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1071:0,86,255:35,0 chr1 230468654 . C . PASS END=230468654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:32,0 chr1 230468655 . A . PASS END=230468693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1180:0,87,255:34,0 chr1 230468694 . C . PASS END=230468745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr1 230468746 . A . PASS END=230468764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr1 230468765 . G . PASS END=230468765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 230468766 . A . PASS END=230468766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr1 230468767 . G . PASS END=230468782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 230468783 . A . PASS END=230468783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 230468784 . A . PASS END=230468787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 230472854 . C . PASS END=230472854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 230472855 . T . LowGQ END=230472855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,202:20,0,222:7,0 chr1 230472856 . T . PASS END=230472856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 230472857 . G . PASS END=230472857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr1 230472858 . C . PASS END=230472868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,205:0,24,205:8,0 chr1 230472869 . C . PASS END=230472869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 230472870 . T . PASS END=230472870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 230472871 . T . PASS END=230472873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 230472874 . A . PASS END=230472874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 230472875 . A . PASS END=230472878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 230472879 . C . PASS END=230472880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 230472881 . T . PASS END=230472883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 230472884 . G . PASS END=230472886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 230472887 . T . PASS END=230472887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr1 230472888 . G . PASS END=230472915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:18,0 chr1 230472916 . T . PASS END=230472916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 230472917 . A . PASS END=230472989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,560:0,48,255:18,0 chr1 230472990 . A . PASS END=230472990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 230472991 . T . PASS END=230473012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,607:0,54,255:18,0 chr1 230473013 . C . PASS END=230473019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 230473020 . C . PASS END=230473022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 230473023 . G . PASS END=230473024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 230473025 . G . PASS END=230473027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 230473028 . C . PASS END=230473028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 230473029 . A . PASS END=230473034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 230486704 . C . PASS END=230486812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:34:0,80,1135:0,80,255:40,0 chr1 230486813 . T . PASS END=230486813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,997:0,65,255:29,0 chr1 230486814 . C . PASS END=230486826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1140:0,83,255:32,0 chr1 230486827 . T . PASS END=230486827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:29,0 chr1 230486828 . T . PASS END=230486835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:29,0 chr1 230486836 . C . PASS END=230486838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 230492640 . C . PASS END=230492650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1125:0,93,255:31,0 chr1 230492651 . A . PASS END=230492651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 230492652 . A . PASS END=230492893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1105:0,80,255:40,0 chr1 230492894 . C . PASS END=230492912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:38:0,102,1490:0,107,255:38,0 chr1 230492913 . C . PASS END=230492913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr1 230492914 . A . PASS END=230492930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,102,1530:0,114,255:38,0 chr1 230492931 . G A, 42.06 PASS DP=40;MQ=249.66;MQRankSum=4.409;ReadPosRankSum=2.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,14,0:0.350,0.000:40:14,6,0:12,8,0:42:77,0,50,501,921,1421:255,0,255:22,0:4.2061e+01,2.9200e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,8,9,5:12,14,9,5 chr1 230492932 . T . PASS END=230492968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,107,1451:0,107,255:40,0 chr1 230492969 . T . PASS END=230493064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1260:0,92,255:40,0 chr1 230493065 . G . PASS END=230493065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 230493066 . A . PASS END=230493067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 230513244 . C . PASS END=230513251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr1 230513252 . G . PASS END=230513252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 230513253 . A . PASS END=230513254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 230513255 . T . PASS END=230513255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 230513256 . C . PASS END=230513258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:28,0 chr1 230513259 . T . PASS END=230513259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 230513260 . T . PASS END=230513261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 230513262 . G . PASS END=230513262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:27,0 chr1 230513263 . C . PASS END=230513269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:30,0 chr1 230513270 . T . PASS END=230513270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 230513271 . C . PASS END=230513278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 230513279 . G . PASS END=230513279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr1 230513280 . G . PASS END=230513288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1250:0,91,255:36,0 chr1 230513289 . T . PASS END=230513289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr1 230513290 . G . PASS END=230513343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:34:0,85,1126:0,85,255:38,0 chr1 230513344 . A . PASS END=230513344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:30,0 chr1 230513345 . G . PASS END=230513356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 230513357 . T . PASS END=230513357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 230513358 . A . PASS END=230513358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 230513359 . G . PASS END=230513367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:26,0 chr1 230558892 . C . PASS END=230558955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,167,255:40,0 chr1 230561344 . C . PASS END=230561369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:9,0 chr1 230561370 . G . PASS END=230561377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 230561378 . C . PASS END=230561382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 230561383 . G . PASS END=230561391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 230561392 . T . LowGQ END=230561392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,343:3,0,255:11,0 chr1 230561393 . C . PASS END=230561393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr1 230561394 . C . PASS END=230561394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 230561395 . A . PASS END=230561413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 230561414 . C . PASS END=230561414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 230561415 . T . LowGQ END=230561415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:9,0 chr1 230561416 . C . PASS END=230561420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 230561421 . G . PASS END=230561421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 230561422 . G . PASS END=230561422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 230561423 . C . PASS END=230561429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:8,0 chr1 230561430 . G . PASS END=230561430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr1 230561431 . C . PASS END=230561440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:8,0 chr1 230561441 . G . PASS END=230561441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 230561442 . C . PASS END=230561448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 230561449 . G . PASS END=230561449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 230561450 . T . PASS END=230561457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr1 230561458 . C . PASS END=230561458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 230561459 . G . PASS END=230561469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 230561470 . G . PASS END=230561485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr1 230561486 . C . PASS END=230561509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:13,0 chr1 230561510 . G . PASS END=230561551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:19,0 chr1 230561552 . G . PASS END=230561552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 230561553 . C . PASS END=230561602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 230561603 . C . PASS END=230561603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 230561604 . T . PASS END=230561614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 230561615 . G . PASS END=230561617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,540:0,31,255:12,0 chr1 230561618 . G . PASS END=230561618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:9,0 chr1 230561619 . G . PASS END=230561619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr1 230561620 . C . PASS END=230561624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr1 230561625 . T . PASS END=230561651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 230561652 . G . PASS END=230561666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,210:6,0 chr1 230561667 . T . LowGQ END=230561674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:6,0:6:0:4:0,0,0:0,12,133:1,0 chr1 230778353 . A . PASS END=230778358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr1 230778359 . A . PASS END=230778359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr1 230778360 . A . PASS END=230778397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,576:0,45,255:17,0 chr1 230778398 . T . PASS END=230778398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 230778399 . G . PASS END=230778424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,597:0,48,255:17,0 chr1 230795210 . G . PASS END=230795210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 230795211 . A . PASS END=230795211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 230795212 . A . PASS END=230795213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 230795214 . A . PASS END=230795214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:30,0 chr1 230795215 . T . PASS END=230795218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1093:0,90,255:30,0 chr1 230795219 . G . PASS END=230795219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 230795220 . A . PASS END=230795222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 230795223 . T . PASS END=230795223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 230795224 . C . PASS END=230795227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr1 230795228 . C . PASS END=230795228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 230795229 . A . PASS END=230795231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,89,255:30,0 chr1 230795232 . T . PASS END=230795232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 230795233 . T . PASS END=230795366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:30:0,80,1139:0,80,255:40,0 chr1 230795367 . A . PASS END=230795367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:30,0 chr1 230795368 . C . PASS END=230795369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1156:0,93,255:31,0 chr1 230795370 . T . PASS END=230795371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:30,0 chr1 230796504 . G . PASS END=230796569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,141,255:40,0 chr1 230797071 . A . PASS END=230797071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,804:0,75,255:25,0 chr1 230797072 . T . PASS END=230797072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 230797073 . A . PASS END=230797077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr1 230797078 . C . PASS END=230797103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:32,0 chr1 230797104 . C . PASS END=230797104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr1 230797105 . T . PASS END=230797105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:31,0 chr1 230797106 . A . PASS END=230797136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1143:0,86,255:34,0 chr1 230797137 . G . PASS END=230797137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 230797138 . A . PASS END=230797139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 230797140 . C . PASS END=230797145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr1 230798887 . A . PASS END=230798910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:65:0,120,1800:0,191,255:40,0 chr1 230798911 . G . PASS END=230798967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,156,255:40,0 chr1 230800230 . A . PASS END=230800333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:33:0,90,1350:0,99,255:40,0 chr1 230804422 . C . PASS END=230804530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:89:44:0,89,1734:0,89,255:40,0 chr1 230805102 . C . PASS END=230805102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:24,0 chr1 230805103 . G . PASS END=230805103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 230805104 . T . PASS END=230805104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr1 230805105 . A . PASS END=230805109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr1 230805110 . T . PASS END=230805110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 230805111 . G . PASS END=230805258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:30:0,81,1125:0,82,255:40,0 chr1 230805259 . T . PASS END=230805261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 230805262 . T . PASS END=230805263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 230805264 . A . PASS END=230805272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:25,0 chr1 230805273 . A . PASS END=230805281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,66,255:19,0 chr1 230807262 . G . PASS END=230807265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 230807266 . T . PASS END=230807285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:25,0 chr1 230807286 . T . PASS END=230807291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,972:0,84,255:30,0 chr1 230807292 . C . PASS END=230807293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:29,0 chr1 230807294 . C . PASS END=230807317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1241:0,89,255:35,0 chr1 230807318 . T . PASS END=230807318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:32,0 chr1 230807319 . A . PASS END=230807331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:35:0,80,1167:0,80,255:37,0 chr1 230807332 . T . PASS END=230807332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:33,0 chr1 230807333 . T . PASS END=230807347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1227:0,88,255:35,0 chr1 230807348 . C . PASS END=230807348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:32,0 chr1 230807349 . C . PASS END=230807376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:33,0 chr1 230807377 . C . PASS END=230807377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:25,0 chr1 230807378 . C . PASS END=230807386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 230810744 . T . PASS END=230810755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,159,255:40,0 chr1 230810756 . T A, 45.44 PASS DP=62;MQ=248.61;MQRankSum=6.583;ReadPosRankSum=5.615;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,24,0:0.387,0.000:62:19,11,0:19,13,0:45:80,0,50,789,1349,2138:255,0,255:38,0:4.5444e+01,1.4574e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,13,11,13:26,12,12,12 chr1 230810757 . A . PASS END=230810793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,153,255:40,0 chr1 230810794 . G . PASS END=230810870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,173,255:40,0 chr1 230814659 . A . PASS END=230814798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:29:0,82,1111:0,82,255:40,0 chr1 230819320 . A . PASS END=230819381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:61:0,120,1800:0,158,255:40,0 chr1 230820831 . C . PASS END=230820966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:34:0,86,1217:0,86,255:40,0 chr1 230820967 . T . PASS END=230820967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:29,0 chr1 230820968 . G . PASS END=230820977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:30,0 chr1 230820978 . A . PASS END=230820978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:30,0 chr1 230820979 . T . PASS END=230820982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1172:0,93,255:31,0 chr1 230822681 . C . PASS END=230822839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:33:0,81,1210:0,82,255:40,0 chr1 230822840 . G . PASS END=230822840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1080:0,44,255:26,0 chr1 230822841 . T . PASS END=230822844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 230822845 . T . PASS END=230822878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr1 230823817 . C . PASS END=230823889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,174,255:40,0 chr1 230824166 . C . PASS END=230824288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,81,255:40,0 chr1 230824289 . T . PASS END=230824305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:27,0 chr1 230824306 . A . PASS END=230824308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:24:0,41,800:0,41,255:19,0 chr1 230825760 . G . PASS END=230825761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 230825762 . G . PASS END=230825762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 230825763 . G . PASS END=230825781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:25,0 chr1 230825782 . C . PASS END=230825782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 230825783 . C . PASS END=230825783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 230825784 . T . PASS END=230825871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,1016:0,81,255:40,0 chr1 230825872 . A . PASS END=230825872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1450:0,77,255:31,0 chr1 230825873 . A . PASS END=230825899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1172:0,83,255:33,0 chr1 230825902 . A . PASS END=230825902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 230827130 . G . PASS END=230827130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 230827131 . T . PASS END=230827131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 230827132 . A . PASS END=230827291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,1016:0,81,255:40,0 chr1 230827292 . T . PASS END=230827310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:25:0,60,864:0,61,255:25,0 chr1 230829038 . A . PASS END=230829039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr1 230829040 . A . PASS END=230829084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,971:0,84,255:34,0 chr1 230829085 . T . PASS END=230829085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:27:35:0,27,1030:0,27,255:27,0 chr1 230829086 . C . PASS END=230829102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:31,0 chr1 230829103 . T . PASS END=230829103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 230829104 . G . PASS END=230829105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 230829106 . T . PASS END=230829106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 230829107 . G . PASS END=230829109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 230829110 . A . PASS END=230829127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr1 230829128 . G . PASS END=230829139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:16,0 chr1 230837044 . G A, 49.95 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=1.169;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:5,7,0:8,5,0:48:85,0,50,421,436,857:255,0,255:13,0:4.9950e+01,6.5751e-05,5.3000e+01,4.2126e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,3,6,6:8,5,3,9 chr1 230838273 . T . PASS END=230838273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 230838331 . G T, 48.74 PASS DP=70;MQ=250.00;MQRankSum=7.141;ReadPosRankSum=4.990;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,31,0:0.443,0.000:70:16,16,0:23,15,0:47:84,0,50,1043,1394,2437:255,0,255:35,0:4.8735e+01,7.9730e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,22,15,16:18,21,16,15 chr1 230838373 . C . PASS END=230838374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 230838379 . G . PASS END=230838379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 230838464 . A . PASS END=230838464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1435:0,104,255:35,0 chr1 230838503 . T . PASS END=230838503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 230838540 . C . PASS END=230838540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 230838599 . G . PASS END=230838600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,150,255:40,0 chr1 230838661 . A . PASS END=230838661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1364:0,98,255:35,0 chr1 230838720 . A G, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=0.831;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,12,0:0.522,0.000:23:6,6,0:5,6,0:48:85,0,50,414,377,792:255,0,255:10,0:5.0000e+01,6.5751e-05,5.2906e+01,4.1414e+02,4.1221e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,8,4:5,6,4,8 chr1 230838804 . C . PASS END=230838804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 230838887 . T . PASS END=230839076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,101,1372:0,101,255:40,0 chr1 230839939 . C . PASS END=230840078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:32:0,81,1215:0,88,255:40,0 chr1 230840079 . T . PASS END=230840083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 230841679 . C . PASS END=230841686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,372:0,33,255:11,0 chr1 230841687 . T C, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,6,0:0,6,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,3:0,0,5,7 chr1 230841688 . A . PASS END=230841698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 230841699 . C . PASS END=230841699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 230841700 . C . PASS END=230841724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr1 230841725 . T . PASS END=230841729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:13,0 chr1 230841730 . C . PASS END=230841735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 230841736 . A . PASS END=230841743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 230841744 . C . PASS END=230841744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 230841745 . A . PASS END=230841755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr1 230841756 . A . PASS END=230841758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 230841759 . G . PASS END=230841773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr1 230841774 . C . PASS END=230841774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 230841775 . A . PASS END=230841783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,770:0,60,255:21,0 chr1 230841784 . G . PASS END=230841784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 230841785 . C . PASS END=230841785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 230841786 . G . PASS END=230841786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 230841787 . C . PASS END=230841787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 230841788 . T . PASS END=230841788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr1 230841789 . C . PASS END=230841790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 230841791 . C . PASS END=230841791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 230841792 . A . PASS END=230841795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 230841796 . A . PASS END=230841797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 230841798 . G . PASS END=230841831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:23,0 chr1 230841832 . T . PASS END=230841836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 230841837 . C . PASS END=230841837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 230841838 . C . PASS END=230841868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,532:0,47,255:19,0 chr1 230841869 . T . PASS END=230841869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 230841870 . G . PASS END=230841871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 230841872 . G . PASS END=230841872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 230841873 . A . PASS END=230841875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 230841876 . A . PASS END=230841876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 230841877 . G . PASS END=230841877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr1 230841878 . A . PASS END=230841941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,34,255:13,0 chr1 230841942 . C . LowGQ END=230841942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr1 230841943 . T . PASS END=230841946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 230845740 . C . PASS END=230845746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 230845747 . A . PASS END=230845747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 230845748 . G . PASS END=230845756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 230845757 . G . PASS END=230845759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 230845760 . G . PASS END=230845760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 230845761 . T . PASS END=230845762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1039:0,71,255:27,0 chr1 230845763 . G . PASS END=230845763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 230845764 . A . PASS END=230845772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1062:0,71,255:26,0 chr1 230845773 . G . PASS END=230845773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 230845774 . T . PASS END=230845774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr1 230845775 . G . PASS END=230845793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr1 230845794 . A G, 48.61 PASS DP=31;MQ=250.00;MQRankSum=4.664;ReadPosRankSum=3.343;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,13,0:0.419,0.000:31:6,6,0:12,7,0:47:83,0,50,457,541,998:255,0,255:17,0:4.8609e+01,8.1542e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,6,7:8,10,7,6 chr1 230845795 . T . PASS END=230845795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 230845796 . C . PASS END=230845797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1092:0,74,255:29,0 chr1 230845798 . G . PASS END=230845798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 230845799 . G . PASS END=230845799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 230845800 . G . PASS END=230845802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 230845803 . C . PASS END=230845803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 230845804 . A . PASS END=230845831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1125:0,80,255:35,0 chr1 230845832 . C . PASS END=230845833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1349:0,95,255:36,0 chr1 230845834 . T . PASS END=230845834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr1 230845835 . G . PASS END=230845871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1189:0,88,255:35,0 chr1 230845872 . G . PASS END=230845872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr1 230845873 . T . PASS END=230845874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 230845875 . A . PASS END=230845875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 230845876 . A . PASS END=230845881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 230845882 . G . PASS END=230845882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 230845883 . A . PASS END=230845884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 230845885 . A . PASS END=230845885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:26,0 chr1 230845886 . G . PASS END=230845886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:26,0 chr1 230845887 . C . PASS END=230845896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 230845897 . C . PASS END=230845899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 230845900 . C . PASS END=230845914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:25,0 chr1 230845915 . C . PASS END=230845915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr1 230845916 . C . PASS END=230845933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,71,255:24,0 chr1 230845934 . C . PASS END=230845934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 230845935 . T . PASS END=230845937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 230845938 . T . PASS END=230845938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 230845939 . T . PASS END=230845939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 230845940 . C . PASS END=230845943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 230845944 . T . PASS END=230845944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 230845945 . G . PASS END=230845962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 230845963 . A . PASS END=230845965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 230845966 . C . PASS END=230845968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 230845969 . C . PASS END=230845976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:18,0 chr1 230845977 . G A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=-0.250;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,15,0:0.600,0.000:25:7,10,0:3,5,0:47:85,0,48,537,350,886:255,0,255:7,0:5.0000e+01,7.9471e-05,5.0813e+01,4.5000e+02,3.8462e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,6,9:6,4,9,6 chr1 230845978 . T . PASS END=230845988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:22:0,61,800:0,61,255:22,0 chr1 230845989 . A . PASS END=230845989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 230845990 . G . PASS END=230845993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 230845994 . G . PASS END=230845994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 230845995 . G . PASS END=230845998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr1 230845999 . G . PASS END=230845999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 230846000 . G . PASS END=230846014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,739:0,60,255:22,0 chr1 230846015 . C . PASS END=230846025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 230846026 . G . PASS END=230846026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 230846027 . C . PASS END=230846034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:26,0 chr1 230846035 . G . PASS END=230846043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:30,0 chr1 230846044 . G . PASS END=230846055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1053:0,71,255:26,0 chr1 230846056 . G . PASS END=230846058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 230846059 . C . PASS END=230846059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 230846060 . C . PASS END=230846064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 230846065 . G . PASS END=230846067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 230846068 . C . PASS END=230846084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:29,0 chr1 230846085 . C . PASS END=230846085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 230846086 . A . PASS END=230846095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1036:0,80,255:32,0 chr1 230846096 . C . PASS END=230846096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:29,0 chr1 230846097 . T . PASS END=230846122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 230846123 . T . PASS END=230846125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 230846126 . C . PASS END=230846135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 230846136 . G . PASS END=230846139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 230846140 . G . PASS END=230846149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 230846150 . T . PASS END=230846165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:29,0 chr1 230846166 . G . PASS END=230846166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 230846167 . C . PASS END=230846167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 230846168 . C . PASS END=230846184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:24,0 chr1 230846185 . C . PASS END=230846185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 230846186 . C . PASS END=230846186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 230846187 . G A, 47.81 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=2.191;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,10,0:0.400,0.000:25:6,5,0:9,5,0:47:83,0,50,357,537,894:255,0,255:15,0:4.7814e+01,9.3708e-05,5.3000e+01,3.5738e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,5,5:8,7,2,8 chr1 230846188 . T . PASS END=230846219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:24:0,68,878:0,68,255:26,0 chr1 230846220 . C . PASS END=230846224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 230846225 . T . PASS END=230846239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 230846240 . G . PASS END=230846273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,909:0,62,255:26,0 chr1 230846274 . A . PASS END=230846295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr1 230846296 . A . PASS END=230846296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:29,0 chr1 230846297 . C . PASS END=230846297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 230846298 . T . PASS END=230846298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:30,0 chr1 230846299 . T . PASS END=230846301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 230846302 . C . PASS END=230846302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 230846303 . T . PASS END=230846324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:31,0 chr1 230846325 . A . PASS END=230846340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:26:0,66,990:0,67,255:26,0 chr1 230846341 . C . PASS END=230846341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:20,0 chr1 230846342 . C . PASS END=230846349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:25:0,66,990:0,68,255:23,0 chr1 230846350 . C . PASS END=230846350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr1 230846351 . C . PASS END=230846358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:23,0 chr1 230846359 . C . PASS END=230846360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 230846361 . A . PASS END=230846367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 230846368 . A . PASS END=230846371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,760:0,53,255:20,0 chr1 230846372 . C . PASS END=230846377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 230846378 . C . PASS END=230846378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 230846379 . T . PASS END=230846388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 230846389 . C . PASS END=230846389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 230846390 . A . PASS END=230846396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:26,0 chr1 230846397 . A . PASS END=230846429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1064:0,87,255:31,0 chr1 230846430 . T . PASS END=230846430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr1 230846431 . T . PASS END=230846434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 230846435 . C . PASS END=230846435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 230846436 . A . PASS END=230846437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 230846438 . C . PASS END=230846439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 230846440 . G . PASS END=230846443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:27,0 chr1 230846444 . A . PASS END=230846448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 230846449 . T . PASS END=230846449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:24,0 chr1 230846450 . A . PASS END=230846456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr1 230846457 . T . PASS END=230846463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 230846464 . T . PASS END=230846470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 230846471 . G . PASS END=230846596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1215:0,89,255:40,0 chr1 230846679 . T . PASS END=230846679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr1 230849853 . C . PASS END=230849853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1242:0,102,255:34,0 chr1 230849857 . G . PASS END=230849857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1318:0,102,255:34,0 chr1 230849872 . C T, 38.57 PASS DP=33;MQ=248.34;MQRankSum=3.584;ReadPosRankSum=1.038;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,10,0:0.303,0.000:33:11,8,0:12,2,0:38:73,0,50,355,814,1170:255,0,255:22,0:3.8573e+01,6.2493e-04,5.3001e+01,3.5519e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,6,6,4:13,10,6,4:230849872 chr1 230849876 . C . PASS END=230849876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 230849886 . T G, 38.83 PASS DP=33;MQ=248.34;MQRankSum=3.584;ReadPosRankSum=2.801;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,10,0:0.303,0.000:33:11,8,0:12,2,0:39:74,0,50,355,778,1139:255,0,255:22,0:3.8826e+01,5.9076e-04,5.3001e+01,3.5460e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,5,5:14,9,5,5:230849872 chr1 230850014 . C . PASS END=230850014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 230850019 . G . PASS END=230850019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 230850050 . C . PASS END=230850050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 230850126 . C . PASS END=230850126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 230850148 . G . PASS END=230850148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr1 230850228 . A . PASS END=230850228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 230850251 . C . PASS END=230850251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr1 230883243 . A . PASS END=230883268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr1 230883269 . G . PASS END=230883277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:31,0 chr1 230883278 . A . PASS END=230883278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 230883279 . C . PASS END=230883335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1133:0,82,255:32,0 chr1 230883336 . A . PASS END=230883337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1073:0,60,255:32,0 chr1 230883338 . G . PASS END=230883342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1194:0,81,255:36,0 chr1 230883343 . A . PASS END=230883344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:67:38:0,67,1348:0,67,255:34,0 chr1 230883345 . G . PASS END=230883411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:37:0,87,1341:0,87,255:40,0 chr1 230883412 . A . PASS END=230883428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,898:0,60,255:26,0 chr1 230883429 . A . PASS END=230883429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,831:0,44,255:23,0 chr1 230883430 . T . PASS END=230883430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 230883431 . C . PASS END=230883431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 230883432 . C . PASS END=230883438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 230883439 . T . PASS END=230883439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr1 230883440 . G . PASS END=230883441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 230883442 . G . PASS END=230883442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr1 230883443 . G . PASS END=230883443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:21,0 chr1 230883444 . A . PASS END=230883451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 230883452 . A . PASS END=230883455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 230891083 . G . PASS END=230891143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:49:0,100,1737:0,100,255:40,0 chr1 230891144 . G . PASS END=230891152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,143,255:40,0 chr1 230895258 . G . PASS END=230895261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:12,0 chr1 230895262 . C . PASS END=230895263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 230895264 . G . PASS END=230895269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:16,0 chr1 230895270 . T . PASS END=230895270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 230895271 . A . PASS END=230895282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:18,0 chr1 230895283 . C . PASS END=230895301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:24,0 chr1 230895302 . C . PASS END=230895302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 230895303 . A . PASS END=230895306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,900:0,72,255:24,0 chr1 230895307 . A . PASS END=230895307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr1 230895308 . G . PASS END=230895313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr1 230895314 . G . PASS END=230895314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 230895315 . C . PASS END=230895334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,61,255:21,0 chr1 230895335 . C . PASS END=230895335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr1 230895336 . A . PASS END=230895336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 230895337 . A . PASS END=230895341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:17,0 chr1 230895342 . T . PASS END=230895342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,654:0,32,255:16,0 chr1 230895343 . T . PASS END=230895343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr1 230895344 . G . PASS END=230895348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:18:0,47,660:0,47,255:18,0 chr1 230895349 . T . PASS END=230895350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 230895351 . G . PASS END=230895351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 230895352 . T . PASS END=230895352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,553:0,23,255:14,0 chr1 230895353 . T . PASS END=230895353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr1 230895354 . A . PASS END=230895355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 230895356 . G . PASS END=230895356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 230895357 . C . PASS END=230895357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 230895358 . C . PASS END=230895358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr1 230895359 . G . PASS END=230895359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:13,0 chr1 230895360 . G . PASS END=230895360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 230895361 . G . PASS END=230895361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 230895362 . A . PASS END=230895364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:15,0 chr1 230895365 . T . PASS END=230895365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr1 230895366 . T . PASS END=230895370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr1 230895371 . T . PASS END=230895371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr1 230895372 . T . PASS END=230895372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 230895373 . C . PASS END=230895373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 230895374 . C . PASS END=230895376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 230898399 . T . PASS END=230898399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 230898400 . T . PASS END=230898400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 230898401 . C . PASS END=230898456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1016:0,81,255:40,0 chr1 230898457 . G . PASS END=230898493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,99,1485:0,99,255:40,0 chr1 230898494 . C T, 50.00 PASS DP=39;MQ=249.42;MQRankSum=4.721;ReadPosRankSum=2.149;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,20,0:0.526,0.000:38:12,9,0:6,11,0:48:85,0,50,698,636,1334:255,0,255:14,0:5.0000e+01,6.6269e-05,5.2775e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,12,10,10:12,6,11,9 chr1 230898495 . G . PASS END=230898516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1234:0,99,255:34,0 chr1 230898517 . A . PASS END=230898517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 230898518 . A . PASS END=230898531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1233:0,86,255:33,0 chr1 230898532 . A . PASS END=230898532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr1 230903287 . G . PASS END=230903290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 230903291 . A . PASS END=230903291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 230903292 . A . PASS END=230903295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 230903296 . G . PASS END=230903296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 230903297 . A . PASS END=230903298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 230903299 . C . PASS END=230903299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 230903300 . T . PASS END=230903302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 230903303 . G . PASS END=230903303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 230903304 . A . PASS END=230903312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:26,0 chr1 230903313 . A . PASS END=230903316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,881:0,62,255:26,0 chr1 230903317 . A . PASS END=230903319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 230903320 . C . PASS END=230903326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 230903327 . A . PASS END=230903331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 230903332 . G . PASS END=230903332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 230903333 . G . PASS END=230903337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1131:0,80,255:30,0 chr1 230903338 . G . PASS END=230903338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 230903339 . G . PASS END=230903349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1294:0,89,255:34,0 chr1 230903350 . T C, 48.98 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=2.636;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:11,6,0:8,9,0:48:84,0,50,537,671,1208:255,0,255:19,0:4.8979e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,5,10,5:12,7,9,6 chr1 230903351 . G . PASS END=230903387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1255:0,87,255:40,0 chr1 230903388 . C . PASS END=230903444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1141:0,80,255:39,0 chr1 230903445 . G . PASS END=230903455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr1 230904926 . A . PASS END=230905009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,140,255:40,0 chr1 230907760 . G . PASS END=230907770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1202:0,90,255:32,0 chr1 230907771 . A . PASS END=230907771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr1 230907772 . G . PASS END=230907845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1105:0,85,255:35,0 chr1 230910300 . T . PASS END=230910377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,120,1800:0,132,255:40,0 chr1 230914719 . G . PASS END=230914728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1426:0,101,255:40,0 chr1 230914729 . A C, 169.95 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,20,0:0,21,0:120:208,123,0,1560,123,1560:255,123,0:0,0:1.6995e+02,1.1995e+02,0.0000e+00,4.5000e+02,1.5472e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,13:0,0,19,22 chr1 230914730 . A . PASS END=230914766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,111,1551:0,113,255:40,0 chr1 230914767 . C . PASS END=230914879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:35:0,87,1294:0,89,255:40,0 chr1 230915925 . A . PASS END=230916082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,101,1635:0,101,255:40,0 chr1 230916246 . T . PASS END=230916447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:33:0,83,1168:0,83,255:40,0 chr1 230916448 . T . PASS END=230916448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1120:0,53,255:27,0 chr1 230916449 . T . PASS END=230916454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:29,0 chr1 230921727 . G . PASS END=230921763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,147,255:40,0 chr1 230923268 . C . PASS END=230923275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,111,1665:0,114,255:38,0 chr1 230923276 . G . PASS END=230923312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,104,1354:0,104,255:40,0 chr1 230923313 . C T, 191.00 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,22,0:0,26,0:141:229,144,0,1808,144,1808:255,144,0:0,0:1.9100e+02,1.4100e+02,0.0000e+00,4.5000e+02,1.7577e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,33:0,0,27,21 chr1 230923314 . G . PASS END=230923348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,102,1530:0,116,255:40,0 chr1 230925878 . G . PASS END=230925935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,108,1541:0,110,255:40,0 chr1 230927610 . A . PASS END=230927674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,189,255:40,0 chr1 230928172 . A . PASS END=230928240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,191,255:40,0 chr1 230928596 . A . PASS END=230928598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,114,1301:0,114,255:39,0 chr1 230928599 . C . PASS END=230928674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,99,1368:0,103,255:40,0 chr1 230930909 . G . PASS END=230930927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,963:0,78,255:26,0 chr1 230930928 . C . PASS END=230930938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 230930939 . T . PASS END=230930939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:28,0 chr1 230930940 . G . PASS END=230930941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 230930942 . T . PASS END=230930945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1024:0,71,255:29,0 chr1 230930946 . G . PASS END=230930975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1125:0,83,255:33,0 chr1 230930976 . G . PASS END=230930977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 230930978 . A . PASS END=230930985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 230930986 . G . PASS END=230931010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,954:0,68,255:26,0 chr1 230931011 . T . PASS END=230931016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:27,0 chr1 230931017 . A . PASS END=230931025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 230933908 . G . PASS END=230933966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,114,1644:0,114,255:40,0 chr1 230937316 . T . PASS END=230937316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 230937317 . T . PASS END=230937317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 230937318 . C . PASS END=230937322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 230937323 . A . PASS END=230937323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 230937324 . T . PASS END=230937324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 230937325 . T . PASS END=230937325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:28,0 chr1 230937326 . T . PASS END=230937452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1170:0,90,255:40,0 chr1 230937453 . A . PASS END=230937453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:28,0 chr1 230937454 . T . PASS END=230937455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr1 230937456 . G . PASS END=230937463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:25,0 chr1 230937464 . T . PASS END=230937464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:23,0 chr1 230937465 . T . PASS END=230937472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,945:0,62,255:24,0 chr1 230937473 . C . PASS END=230937474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,853:0,42,255:20,0 chr1 230937475 . T . PASS END=230937483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:22,0 chr1 230937484 . G . PASS END=230937484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 230937485 . G . PASS END=230937487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 230937488 . A . PASS END=230937494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 230975598 . T . PASS END=230975654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:66:0,120,1800:0,165,255:40,0 chr1 230979100 . C . PASS END=230979115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,528:0,48,255:19,0 chr1 230979116 . T . PASS END=230979148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,671:0,63,255:23,0 chr1 230979149 . C . PASS END=230979161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:20:0,52,792:0,52,255:19,0 chr1 230979162 . A . PASS END=230979162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr1 230979163 . T . PASS END=230979164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 230979165 . G . PASS END=230979166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 230979167 . A . PASS END=230979167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 230979168 . G . PASS END=230979170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 230979171 . T . PASS END=230979172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 230979173 . C . PASS END=230979174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 230979175 . C . PASS END=230979182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 230979183 . G . PASS END=230979198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 230979199 . G . PASS END=230979203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 230979204 . G . PASS END=230979207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 230979208 . A . PASS END=230979208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 230979209 . C . PASS END=230979258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,61,255:25,0 chr1 230979259 . G . PASS END=230979259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 230979260 . G . PASS END=230979272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr1 230979273 . G . PASS END=230979283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr1 230979284 . A . PASS END=230979284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:27,0 chr1 230979285 . G . PASS END=230979287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,974:0,84,255:30,0 chr1 230979288 . T . PASS END=230979288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr1 230979289 . G . PASS END=230979297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr1 230979298 . T . PASS END=230979298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 230979299 . T . PASS END=230979313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 230979314 . C . PASS END=230979337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 230979338 . C . PASS END=230979346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 230979347 . G . PASS END=230979358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 230979359 . T . PASS END=230979360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 230979361 . T . PASS END=230979361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 230979362 . T . PASS END=230979366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 230979367 . C . PASS END=230979371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 230979372 . C . PASS END=230979372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 230979373 . C . PASS END=230979392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr1 230979393 . G . PASS END=230979398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr1 230979399 . G . PASS END=230979419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 230979420 . G . PASS END=230979422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:22:0,57,855:0,66,255:19,0 chr1 230979423 . C . PASS END=230979423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 230979424 . C . PASS END=230979434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:18,0 chr1 230979435 . A . PASS END=230979435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,682:0,11,255:17,0 chr1 230979436 . C . PASS END=230979437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 230979438 . G . PASS END=230979438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 230979439 . C . PASS END=230979456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr1 230979457 . G . PASS END=230979462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:20,0 chr1 230979463 . C . PASS END=230979480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,676:0,57,255:19,0 chr1 230979481 . G . PASS END=230979482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 230979483 . T . PASS END=230979498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 230979499 . C . PASS END=230979502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 230979503 . C . PASS END=230979506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr1 230979507 . A . PASS END=230979507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 230979508 . G . PASS END=230979556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,629:0,44,255:19,0 chr1 230979557 . T . PASS END=230979562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 230979563 . A . PASS END=230979563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 230979564 . G . PASS END=230979567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 230979568 . T . PASS END=230979568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 230979569 . C . PASS END=230979586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 230979587 . G . PASS END=230979587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr1 230979588 . T . PASS END=230979620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:23,0 chr1 230979621 . A . PASS END=230979641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr1 230979642 . T . PASS END=230979642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 230991414 . C . PASS END=230991464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,217,255:40,0 chr1 231003926 . C . PASS END=231003926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 231003927 . T . PASS END=231003927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,843:0,17,255:24,0 chr1 231003928 . C . PASS END=231003929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 231003930 . T . PASS END=231003930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 231003931 . C . PASS END=231003933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 231003934 . C . PASS END=231003934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 231003935 . G . PASS END=231003935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 231003936 . A . PASS END=231003936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:26,0 chr1 231003937 . A . PASS END=231003937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 231003938 . G . PASS END=231003941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 231003942 . A . PASS END=231003942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:26,0 chr1 231003943 . C . PASS END=231003944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 231003945 . A . PASS END=231003945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr1 231003946 . C . PASS END=231003947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 231003948 . T . PASS END=231003948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr1 231003949 . T . PASS END=231003949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,943:0,65,255:26,0 chr1 231003950 . C . PASS END=231003950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 231003951 . T . PASS END=231003968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr1 231003969 . A . PASS END=231003969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:25,0 chr1 231003970 . A . PASS END=231003971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 231003972 . C . PASS END=231003973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231003974 . G . PASS END=231003974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 231003975 . G . PASS END=231003977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 231003978 . A . PASS END=231003978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,956:0,48,255:28,0 chr1 231003979 . A . PASS END=231003980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 231003981 . C . PASS END=231003981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 231003982 . G . PASS END=231003982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 231003983 . C . PASS END=231003984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 231003985 . T . PASS END=231003986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231003987 . A . PASS END=231003987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr1 231003988 . G . PASS END=231003997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 231003998 . G . PASS END=231003998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr1 231003999 . T . PASS END=231003999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 231004000 . C . PASS END=231004001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1031:0,71,255:28,0 chr1 231004002 . C . PASS END=231004009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 231004010 . T . PASS END=231004010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 231004011 . C . PASS END=231004026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 231004027 . G . PASS END=231004027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 231004028 . C . PASS END=231004031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 231004032 . C . PASS END=231004034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 231004035 . A . PASS END=231004044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:27,0 chr1 231004045 . G . PASS END=231004045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 231004046 . G . PASS END=231004049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231004050 . A . PASS END=231004055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,903:0,67,255:25,0 chr1 231004056 . T . PASS END=231004068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,58,255:19,0 chr1 231004069 . C . PASS END=231004101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:23,0 chr1 231004102 . T . PASS END=231004102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,706:0,52,255:20,0 chr1 231004103 . C . PASS END=231004109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 231004110 . A . PASS END=231004110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr1 231004111 . T . PASS END=231004113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 231004114 . T . PASS END=231004116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr1 231004117 . C . PASS END=231004117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 231004118 . C . PASS END=231004122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,807:0,55,255:19,0 chr1 231004123 . C . PASS END=231004137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 231004138 . T . PASS END=231004176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,507:0,41,255:19,0 chr1 231004177 . T . PASS END=231004177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr1 231004178 . T . PASS END=231004181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 231004182 . T . PASS END=231004182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 231004183 . C . PASS END=231004188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:15,0 chr1 231004189 . C . PASS END=231004190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 231004191 . T . PASS END=231004191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr1 231004192 . C . PASS END=231004194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 231004195 . G . PASS END=231004222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr1 231004223 . G A, 0.01 DRAGENSnpHardQUAL DP=11;MQ=250.00;MQRankSum=1.423;ReadPosRankSum=1.423;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:7,1,0:3,0,0:29:6,0,50,36,358,393:6,0,255:9,0:5.3322e-03,2.9112e+01,8.2112e+01,6.4873e+01,4.2146e+02,4.2544e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,0,1:3,7,0,1 chr1 231004224 . C . PASS END=231004228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr1 231004229 . A . PASS END=231004250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,230:9,0 chr1 231004251 . G . PASS END=231004257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,255:5,0 chr1 231004258 . T . PASS END=231004258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,241:4,0 chr1 231042651 . C . PASS END=231042694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:43:0,91,1507:0,91,255:40,0 chr1 231042695 . C . PASS END=231042731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:55:0,120,1800:0,135,255:40,0 chr1 231042732 . T A, 48.74 PASS DP=55;MQ=250.00;MQRankSum=6.305;ReadPosRankSum=5.864;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,24,0:0.436,0.000:55:12,9,0:19,15,0:47:84,0,50,858,1042,1900:255,0,255:27,0:4.8740e+01,7.9730e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,14,10:19,12,9,15 chr1 231042733 . A . PASS END=231042765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,99,1485:0,112,255:40,0 chr1 231044458 . C . PASS END=231044766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,135,255:40,0 chr1 231047216 . C . PASS END=231047264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:70:0,120,1800:0,164,255:40,0 chr1 231047265 . A . PASS END=231047295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:66:0,120,1800:0,198,255:40,0 chr1 231048369 . C . PASS END=231048504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:55:0,120,1800:0,149,255:40,0 chr1 231051939 . T . PASS END=231052048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,129,255:40,0 chr1 231056169 . T . PASS END=231056340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:72:0,120,1800:0,177,255:40,0 chr1 231057167 . C . PASS END=231057209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:94:0,120,1800:0,253,255:40,0 chr1 231057210 . T . PASS END=231057246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:77:0,120,1800:0,231,255:40,0 chr1 231057247 . A T, 49.94 PASS DP=76;MQ=249.99;MQRankSum=7.493;ReadPosRankSum=1.445;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,37,0:0.487,0.000:76:20,18,0:19,19,0:48:85,0,50,1315,1371,2686:255,0,255:25,0:4.9943e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,20,11,26:18,21,20,17 chr1 231057248 . C . PASS END=231057250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,212,255:40,0 chr1 231059587 . C . PASS END=231059660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:37:0,85,1305:0,85,255:40,0 chr1 231059661 . C . PASS END=231059669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:29:0,60,900:0,87,255:25,0 chr1 231059670 . G . PASS END=231059670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 231059671 . T . PASS END=231059679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 231060587 . C . PASS END=231060596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1186:0,86,255:34,0 chr1 231060597 . T . PASS END=231060597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr1 231060598 . A . PASS END=231060697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1241:0,89,255:40,0 chr1 231060698 . T . PASS END=231060698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:36,0 chr1 231060699 . C . PASS END=231060719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1304:0,94,255:37,0 chr1 231061263 . C . PASS END=231061393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:36:0,90,1258:0,90,255:40,0 chr1 231064683 . T . PASS END=231064839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:93:39:0,93,1395:0,99,255:40,0 chr1 231067044 . C . PASS END=231067050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,894:0,62,255:25,0 chr1 231067051 . A . PASS END=231067051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,840:0,51,255:23,0 chr1 231067052 . T . PASS END=231067062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr1 231067063 . A . PASS END=231067207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,971:0,81,255:40,0 chr1 231067208 . T . PASS END=231067213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr1 231067214 . C . PASS END=231067215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:30:0,57,855:0,74,255:19,0 chr1 231067216 . C . PASS END=231067218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,73,255:20,0 chr1 231067482 . C . PASS END=231067482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 231067483 . T . PASS END=231067483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:27,0 chr1 231067484 . T . PASS END=231067489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 231067490 . T . PASS END=231067490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,992:0,60,255:29,0 chr1 231067491 . C . PASS END=231067498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 231067499 . C . PASS END=231067499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 231067500 . T . PASS END=231067603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:31:0,91,1164:0,91,255:40,0 chr1 231067604 . C . PASS END=231067604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 231067605 . T . PASS END=231067619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1255:0,86,255:33,0 chr1 231067620 . T . PASS END=231067623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr1 231069525 . C . PASS END=231069607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:74:0,120,1800:0,216,255:40,0 chr1 231070599 . C . PASS END=231070607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:92:0,120,1800:0,255,255:40,0 chr1 231071904 . A . PASS END=231072002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:41:0,84,1260:0,113,255:40,0 chr1 231072003 . A . PASS END=231072003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr1 231072004 . C . PASS END=231072010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 231075132 . C . PASS END=231075242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,152,255:40,0 chr1 231076186 . C . PASS END=231076189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 231076190 . G . PASS END=231076197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:23,0 chr1 231076198 . G . PASS END=231076198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 231076199 . T . PASS END=231076202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 231076203 . G . PASS END=231076214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:31,0 chr1 231076215 . G . PASS END=231076291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:39,0 chr1 231076292 . G . PASS END=231076292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231076293 . G . PASS END=231076298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231076299 . G . PASS END=231076299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 231076300 . A . PASS END=231076302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 231079552 . T . PASS END=231079644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,111,1665:0,117,255:40,0 chr1 231081135 . A . PASS END=231081200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:91:0,120,1800:0,255,255:40,0 chr1 231090079 . C . PASS END=231090149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:87:0,120,1800:0,247,255:40,0 chr1 231092296 . T . PASS END=231092306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 231093970 . C . PASS END=231094005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:48:0,120,1800:0,123,255:40,0 chr1 231094006 . A . PASS END=231094035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:81:55:0,81,1215:0,98,255:40,0 chr1 231094036 . T . PASS END=231094045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:60:48:0,60,900:0,88,255:22,0 chr1 231096955 . C . PASS END=231096959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1345:0,111,255:37,0 chr1 231096960 . T . PASS END=231096960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:36,0 chr1 231096961 . C . PASS END=231097004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:94:37:0,94,1145:0,94,255:40,0 chr1 231097005 . C . PASS END=231097039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1215:0,84,255:38,0 chr1 231097040 . A . PASS END=231097041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 231097042 . G A, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.468;ReadPosRankSum=3.869;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:9,6,0:4,9,0:48:85,0,50,537,465,1001:255,0,255:12,0:5.0000e+01,6.6786e-05,5.2687e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,9,6:8,5,6,9 chr1 231097043 . G . PASS END=231097049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 231114306 . C . LowDepth END=231114365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 231114366 . C . LowDepth;LowGQ END=231114406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,33:3,0 chr1 231114407 . T . PASS END=231114422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr1 231114423 . G . PASS END=231114441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 231114442 . G . PASS END=231114463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,421:0,33,255:13,0 chr1 231114464 . C . PASS END=231114464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 231114465 . C G, 44.23 PASS DP=14;MQ=250.00;MQRankSum=2.758;ReadPosRankSum=0.212;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,4,0:0.286,0.000:14:2,2,0:8,2,0:44:79,0,50,143,352,496:113,0,255:10,0:4.4231e+01,1.8561e-04,5.3000e+01,1.4310e+02,3.8725e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,3,1:4,6,3,1 chr1 231114466 . G . PASS END=231114502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr1 231114503 . C . PASS END=231114519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 231114520 . G . PASS END=231114524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 231114525 . C . PASS END=231114526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 231114527 . A . PASS END=231114535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 231114536 . C . PASS END=231114541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 231114542 . A . PASS END=231114551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 231114552 . A . PASS END=231114552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 231114553 . G . PASS END=231114557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 231114558 . A . PASS END=231114572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 231114573 . C . PASS END=231114573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 231114574 . C . PASS END=231114576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 231114852 . A . PASS END=231114865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,32,255:13,0 chr1 231114866 . G . PASS END=231114880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,623:0,40,255:19,0 chr1 231114881 . G . PASS END=231114886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 231114887 . G . PASS END=231114894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 231114895 . A . PASS END=231114900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 231114901 . A . PASS END=231114901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr1 231114902 . T . PASS END=231114913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,662:0,47,255:19,0 chr1 231114914 . G . PASS END=231114914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 231114915 . A . PASS END=231114915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 231114916 . C . PASS END=231114916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 231114917 . T . PASS END=231114923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr1 231114924 . G T, 48.04 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=1.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,8,0:0.400,0.000:20:6,3,0:6,5,0:47:83,0,50,257,429,686:206,0,255:11,0:4.8039e+01,9.0084e-05,5.3000e+01,2.5731e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,9,4,4:7,5,5,3 chr1 231114925 . C . PASS END=231114943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:19,0 chr1 231114944 . G . PASS END=231114944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:16,0 chr1 231114945 . T . PASS END=231114948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr1 231114949 . G . PASS END=231114961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 231114962 . C . PASS END=231114969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 231114970 . A . PASS END=231114970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 231114971 . G . PASS END=231114977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 231114978 . G . PASS END=231114978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 231114979 . A . PASS END=231114979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 231114980 . G . PASS END=231114980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 231114981 . T . PASS END=231114983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 231114984 . T . PASS END=231114984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr1 231114985 . A . PASS END=231114990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr1 231114991 . A . PASS END=231114991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr1 231114992 . C . PASS END=231114992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 231114993 . T . PASS END=231115002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:20:0,49,737:0,49,255:19,0 chr1 231115003 . G . PASS END=231115003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:16,0 chr1 231115004 . T . PASS END=231115010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:17,0 chr1 231115011 . A . PASS END=231115015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:17:0,39,585:0,51,255:13,0 chr1 231115016 . A . PASS END=231115018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 231115019 . C . PASS END=231115025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 231124066 . A . PASS END=231124092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr1 231124093 . T . PASS END=231124166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:81:34:0,81,1305:0,81,255:40,0 chr1 231124167 . T . PASS END=231124167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:28,0 chr1 231124168 . T . PASS END=231124171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:29,0 chr1 231124172 . A . PASS END=231124174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:27,0 chr1 231124175 . C . PASS END=231124177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 231124178 . A . PASS END=231124178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 231124179 . A . PASS END=231124179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231124180 . A . PASS END=231124180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231124181 . T . PASS END=231124181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:25,0 chr1 231124182 . A . PASS END=231124184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 231124185 . T . PASS END=231124185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:24,0 chr1 231124186 . G . PASS END=231124186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr1 231125856 . A . PASS END=231125991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:39:0,92,1436:0,92,255:40,0 chr1 231125992 . T . PASS END=231125992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr1 231125993 . T . PASS END=231126009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,95,255:36,0 chr1 231131506 . A . PASS END=231131528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,128,255:40,0 chr1 231131529 . A . PASS END=231131565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:60:0,120,1800:0,167,255:40,0 chr1 231131566 . C . LowGQ END=231131567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,11:92:0:88:0,0,2679:7,0,255:40,12 chr1 231131568 . A . PASS END=231131568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,6:87:29:87:0,29,2845:0,29,255:40,0 chr1 231131569 . A . PASS END=231131603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:82:0,120,1800:0,217,255:40,0 chr1 231131604 . T . PASS END=231131730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:46:0,102,1530:0,108,255:40,0 chr1 231132865 . A . PASS END=231132865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 231132867 . T . PASS END=231133009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1041:0,87,255:40,0 chr1 231155609 . C . PASS END=231155627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:12,0 chr1 231155628 . C . PASS END=231155628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 231155629 . A . PASS END=231155642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr1 231155643 . A . PASS END=231155663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,460:0,42,255:16,0 chr1 231155664 . A . PASS END=231155665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 231155666 . G . PASS END=231155687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,635:0,51,255:19,0 chr1 231155688 . C . PASS END=231155716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,743:0,60,255:26,0 chr1 231155717 . G . PASS END=231155748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,918:0,81,255:29,0 chr1 231155749 . T . PASS END=231155749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr1 231155750 . C . PASS END=231155752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 231155753 . C . PASS END=231155753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr1 231155754 . A . PASS END=231155772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1033:0,87,255:29,0 chr1 231155773 . G . PASS END=231155773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 231155774 . G . PASS END=231155777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 231155778 . G . PASS END=231155779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 231155780 . G . PASS END=231155781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 231155782 . C . PASS END=231155783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1116:0,77,255:29,0 chr1 231155784 . G . PASS END=231155788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 231155789 . G . PASS END=231155791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 231155792 . T . PASS END=231155792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1170:0,93,255:31,0 chr1 231155793 . G . PASS END=231155793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr1 231155794 . C . PASS END=231155796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 231155797 . C . PASS END=231155797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr1 231155798 . C . PASS END=231155800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:31,0 chr1 231155801 . G . PASS END=231155802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1139:0,61,255:28,0 chr1 231155803 . A . PASS END=231155804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:30,0 chr1 231155805 . T . PASS END=231155805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,977:0,57,255:28,0 chr1 231155806 . C . PASS END=231155810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1101:0,80,255:29,0 chr1 231155811 . A . PASS END=231155816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1005:0,77,255:28,0 chr1 231155817 . T . PASS END=231155817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:23,0 chr1 231155818 . C . PASS END=231155839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr1 231155840 . G . PASS END=231155863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,630:0,41,255:19,0 chr1 231155864 . G . PASS END=231155872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,540:0,31,255:12,0 chr1 231175667 . C . PASS END=231175678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr1 231175679 . G . PASS END=231175679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 231175680 . A . PASS END=231175681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 231175682 . C . PASS END=231175693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 231175694 . G . PASS END=231175704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 231175705 . T . PASS END=231175706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 231175707 . G . PASS END=231175719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 231175720 . G . LowGQ END=231175720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 231175721 . C . PASS END=231175731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 231175732 . C . PASS END=231175735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 231175736 . G . PASS END=231175741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 231175742 . G . PASS END=231175743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 231175744 . C . PASS END=231175754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 231175755 . C . PASS END=231175762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 231175763 . G . PASS END=231175764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 231175765 . T . PASS END=231175765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 231175766 . C . PASS END=231175766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 231175767 . A . LowGQ END=231175768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:8:0,0,255:0,0,255:8,0 chr1 231175769 . C . PASS END=231175775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 231175776 . T . PASS END=231175776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 231175777 . G . PASS END=231175779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 231175780 . T . PASS END=231175780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 231175781 . G . PASS END=231175782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 231175783 . G . PASS END=231175783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 231175784 . C . PASS END=231175790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,227:8,0 chr1 231175791 . T . PASS END=231175793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 231175794 . G . PASS END=231175794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 231175795 . C . PASS END=231175800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 231175801 . G . PASS END=231175801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 231175802 . C . PASS END=231175815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 231175816 . G . PASS END=231175827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 231175828 . A . PASS END=231175828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:9,0 chr1 231175829 . C . PASS END=231175832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 231175833 . C . PASS END=231175855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 231175856 . C . PASS END=231175856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 231175857 . A . PASS END=231175866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 231175867 . A . PASS END=231175872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 231175873 . T . PASS END=231175873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 231175874 . T . PASS END=231175890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,311:0,27,255:9,0 chr1 231175891 . C . PASS END=231175892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 231175893 . T . PASS END=231175924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 231175925 . C . PASS END=231175925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 231175926 . G A, 0.63 DRAGENSnpHardQUAL DP=4;MQ=250.00;MQRankSum=0.727;ReadPosRankSum=0.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:3,1,0:0.250,0.000:4:3,0,0:0,1,0:9:27,0,50,36,107,143:27,0,104:2,0:6.3357e-01,8.6740e+00,6.1674e+01,4.4433e+01,1.5070e+02,1.5469e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,1,0:1,2,0,1 chr1 231175927 . C . LowGQ END=231175955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,1:2:0:1:0,0,0:0,0,0:3,0 chr1 231175956 . A . LowDepth;LowGQ END=231175957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 231298716 . A . PASS END=231298719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 231298720 . A . PASS END=231298720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 231298721 . G . PASS END=231298736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr1 231298737 . C . PASS END=231298737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 231298738 . C . PASS END=231298747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:12,0 chr1 231298748 . C . PASS END=231298748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 231298749 . T . PASS END=231298769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr1 231298770 . A . PASS END=231298779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,623:0,51,255:18,0 chr1 231298780 . G . PASS END=231298780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 231298781 . T . PASS END=231298781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 231298782 . T . PASS END=231298788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 231298789 . A . PASS END=231298789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:21,0 chr1 231298790 . T . PASS END=231298833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr1 231298834 . A . PASS END=231298834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,807:0,41,255:22,0 chr1 231298835 . C . PASS END=231298877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,839:0,65,255:25,0 chr1 231298878 . T . PASS END=231298878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 231298879 . C . PASS END=231298887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 231298888 . A . PASS END=231298888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 231298889 . G . PASS END=231298891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 231298892 . G . PASS END=231298892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 231298893 . G . PASS END=231298907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr1 231298908 . G . PASS END=231298914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:22:0,42,630:0,50,255:20,0 chr1 231298915 . T . PASS END=231298917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:33:21:0,33,495:0,63,255:12,0 chr1 231298918 . A . PASS END=231298919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,405:0,49,255:9,0 chr1 231298920 . C . PASS END=231298929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,32,255:10,0 chr1 231298930 . C . PASS END=231298930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 231298931 . G . PASS END=231298931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 231298932 . G . PASS END=231298955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 231298956 . G . PASS END=231298997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr1 231298998 . G . PASS END=231298998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 231298999 . G . PASS END=231299017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr1 231299018 . G . PASS END=231299018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr1 231299019 . C . PASS END=231299053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 231299054 . G . PASS END=231299055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 231299056 . C . PASS END=231299079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr1 231299080 . C . PASS END=231299080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 231299081 . C . PASS END=231299084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 231299085 . G . PASS END=231299085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 231299086 . G . PASS END=231299087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 231299088 . G . PASS END=231299088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 231299089 . T . PASS END=231299091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 231299092 . G . PASS END=231299096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 231299097 . C . PASS END=231299100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 231299101 . C . PASS END=231299101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 231299102 . C . PASS END=231299113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:16,0 chr1 231299114 . A . PASS END=231299114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 231299115 . C . PASS END=231299162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 231299163 . C . PASS END=231299163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 231299164 . T . PASS END=231299179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 231299180 . C . PASS END=231299180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 231299181 . T . PASS END=231299189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr1 231299190 . T . PASS END=231299190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 231299191 . G . PASS END=231299200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:16,0 chr1 231299201 . C . PASS END=231299213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr1 231299214 . T . PASS END=231299216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 231299217 . C . PASS END=231299220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 231299221 . A . PASS END=231299221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:18,0 chr1 231299222 . C . PASS END=231299267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,712:0,44,255:19,0 chr1 231299268 . A . PASS END=231299272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 231299273 . G . PASS END=231299288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 231299289 . G . PASS END=231299291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 231299292 . C . PASS END=231299295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 231299296 . G . PASS END=231299331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,869:0,63,255:26,0 chr1 231299332 . C . PASS END=231299393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1080:0,80,255:31,0 chr1 231299394 . G . PASS END=231299404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:24,0 chr1 231299405 . C . PASS END=231299405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:19,0 chr1 231299406 . T . PASS END=231299418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 231299419 . A . PASS END=231299458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,637:0,40,255:19,0 chr1 231299459 . T . PASS END=231299473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,450:0,36,255:13,0 chr1 231299474 . G . LowGQ END=231299474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 231299475 . C . PASS END=231299493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 231299494 . C . PASS END=231299511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 231299512 . G . PASS END=231299512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 231299513 . G . PASS END=231299520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 231299521 . G . PASS END=231299522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr1 231299523 . A . PASS END=231299525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:11:0,24,360:0,33,255:8,0 chr1 231299526 . G . PASS END=231299552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,451:0,39,255:13,0 chr1 231299553 . G . PASS END=231299553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr1 231299554 . G . PASS END=231299563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr1 231299564 . C . PASS END=231299564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 231299565 . C . PASS END=231299580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:16,0 chr1 231299581 . C . PASS END=231299581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 231299582 . G . PASS END=231299588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:18,0 chr1 231299589 . A . PASS END=231299630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:22,0 chr1 231299631 . C . LowGQ END=231299631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,667:6,0,255:19,0 chr1 231299632 . A . PASS END=231299634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr1 231299635 . A . PASS END=231299635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr1 231299636 . A . PASS END=231299641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr1 231299642 . G . PASS END=231299642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 231299643 . A . PASS END=231299656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,700:0,66,255:25,0 chr1 231299657 . C . PASS END=231299657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 231299658 . T . PASS END=231299678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 231299679 . G . PASS END=231299685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 231299686 . A . PASS END=231299688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:20,0 chr1 231299689 . T . PASS END=231299689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 231299690 . G . PASS END=231299694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 231299695 . T . PASS END=231299697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 231299698 . A . PASS END=231299698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:17,0 chr1 231299699 . G . PASS END=231299727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr1 231299728 . A . PASS END=231299728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,666:0,21,255:16,0 chr1 231299729 . G . PASS END=231299752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,665:0,41,255:17,0 chr1 231299753 . G . PASS END=231299753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 231299754 . C . PASS END=231299759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 231320760 . T . PASS END=231320764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:17,0 chr1 231320765 . T . PASS END=231320766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 231320767 . A . PASS END=231320767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 231320768 . T . PASS END=231320770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr1 231320771 . T . PASS END=231320771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 231320772 . G . PASS END=231320775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 231320776 . G . PASS END=231320776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 231320777 . C . PASS END=231320780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:24,0 chr1 231320781 . G . PASS END=231320788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1172:0,93,255:37,0 chr1 231320789 . T . PASS END=231320789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1205:0,78,255:35,0 chr1 231320790 . A . PASS END=231320882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:37:0,87,1358:0,87,255:40,1 chr1 231320883 . G . PASS END=231320884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 231320885 . A . PASS END=231320885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1434:0,57,255:36,0 chr1 231320886 . G . PASS END=231320919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:41:0,99,1513:0,99,255:40,0 chr1 231320920 . C T, 48.63 PASS DP=41;MQ=249.31;MQRankSum=5.425;ReadPosRankSum=2.640;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,18,0:0.439,0.000:41:12,10,0:11,8,0:47:83,0,50,615,812,1427:255,0,255:17,0:4.8627e+01,8.1283e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,8,10:9,14,10,8 chr1 231320921 . G . PASS END=231320927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1305:0,82,255:34,0 chr1 231320928 . A . PASS END=231320930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:70:39:0,70,1125:0,70,255:25,0 chr1 231320931 . C . PASS END=231320933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,98,255:27,0 chr1 231320934 . G . PASS END=231320935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1170:0,70,255:27,0 chr1 231320936 . A . PASS END=231320955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 231320956 . T . PASS END=231320957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr1 231320958 . C . PASS END=231320982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,970:0,75,255:26,0 chr1 231321822 . C . PASS END=231321853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,823:0,66,255:26,0 chr1 231321854 . C . PASS END=231321854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 231321855 . T . PASS END=231321858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr1 231321859 . T . PASS END=231321885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:25:0,67,955:0,67,255:26,0 chr1 231321886 . C . PASS END=231321886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 231321887 . T . PASS END=231321893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 231321894 . C . PASS END=231321910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,765:0,54,255:19,0 chr1 231321911 . C . PASS END=231321919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr1 231323263 . C . PASS END=231323296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,195,255:40,0 chr1 231323297 . A . PASS END=231323313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,199,255:40,0 chr1 231333117 . G . PASS END=231333212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,115,1755:0,115,255:40,0 chr1 231334793 . G . PASS END=231334797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 231334798 . C . PASS END=231334799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,829:0,33,255:24,0 chr1 231334800 . G . PASS END=231334800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 231334801 . A . PASS END=231334818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,939:0,65,255:26,0 chr1 231334819 . C . PASS END=231334864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1047:0,81,255:36,0 chr1 231334865 . A . PASS END=231334865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:32,0 chr1 231334866 . A . PASS END=231334905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1180:0,83,255:35,0 chr1 231334906 . C . PASS END=231334915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,889:0,67,255:26,0 chr1 231335894 . A . PASS END=231335953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1205:0,89,255:38,0 chr1 231335954 . G . PASS END=231335975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:24:0,63,945:0,72,255:25,0 chr1 231335976 . A . PASS END=231335986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:17,0 chr1 231335987 . C . PASS END=231335987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 231335988 . C . PASS END=231336004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,645:0,54,255:18,0 chr1 231337104 . A . PASS END=231337104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 231337105 . T . PASS END=231337105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr1 231337106 . C . PASS END=231337111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 231337112 . T . PASS END=231337112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 231337113 . G . PASS END=231337113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 231337114 . C . PASS END=231337114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 231337115 . T . PASS END=231337122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr1 231337123 . A . PASS END=231337125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 231337126 . G . PASS END=231337126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 231337127 . C . PASS END=231337134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr1 231337135 . T . PASS END=231337136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 231337137 . T . PASS END=231337148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,983:0,87,255:30,0 chr1 231337149 . T . PASS END=231337149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr1 231337150 . G . PASS END=231337189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1102:0,83,255:34,0 chr1 231337190 . T . PASS END=231337190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr1 231337191 . G . PASS END=231337194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 231337195 . T . PASS END=231337195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 231337196 . G . PASS END=231337221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr1 231337222 . A . PASS END=231337222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231337223 . G . PASS END=231337237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:29,0 chr1 231337238 . G . PASS END=231337253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:25,0 chr1 231337254 . A . PASS END=231337261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:24:0,45,675:0,72,255:16,0 chr1 231337262 . G . PASS END=231337263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:33:24:0,33,495:0,72,255:11,0 chr1 231339613 . T . PASS END=231339617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 231339618 . C . PASS END=231339618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 231339619 . C . PASS END=231339637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:19,0 chr1 231339638 . G . PASS END=231339648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr1 231339649 . G . PASS END=231339650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 231339651 . A . PASS END=231339670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,884:0,61,255:26,0 chr1 231339671 . G . PASS END=231339671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr1 231339672 . C . PASS END=231339673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 231339674 . G . PASS END=231339675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 231339676 . C . PASS END=231339679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr1 231339680 . G . PASS END=231339693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,992:0,68,255:26,0 chr1 231339694 . T . PASS END=231339694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,797:0,47,255:23,0 chr1 231339695 . C . PASS END=231339707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 231339708 . G . PASS END=231339708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr1 231339709 . T . PASS END=231339712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 231339713 . C T, 50.00 PASS DP=24;MQ=246.57;MQRankSum=4.128;ReadPosRankSum=2.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:6,5,0:6,7,0:48:85,0,50,428,428,856:255,0,255:10,0:5.0000e+01,6.5233e-05,5.3000e+01,4.2789e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,5,7:8,4,6,6 chr1 231339714 . G . PASS END=231339720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:20,0 chr1 231339721 . T . PASS END=231339729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 231339730 . T . PASS END=231339730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr1 231339731 . G . PASS END=231339734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:17,0 chr1 231339735 . G . PASS END=231339736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 231339737 . C . PASS END=231339737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 231339738 . G . PASS END=231339738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 231339739 . G . PASS END=231339739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr1 231339740 . T . PASS END=231339740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 231339741 . G . PASS END=231339741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 231339742 . C . PASS END=231339742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 231339743 . C . PASS END=231339743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 231339744 . G . PASS END=231339744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr1 231339745 . G . PASS END=231339745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr1 231339746 . G . PASS END=231339746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 231339747 . G . PASS END=231339747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr1 231339748 . G . PASS END=231339750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,37,255:17,0 chr1 231339751 . A . PASS END=231339753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,38,255:12,0 chr1 231339754 . T . PASS END=231339754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:11,0 chr1 231339755 . C . PASS END=231339758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,38,255:12,0 chr1 231342398 . G . PASS END=231342399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 231342400 . A . PASS END=231342400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:24,0 chr1 231342401 . G . PASS END=231342405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 231342406 . C . PASS END=231342406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr1 231342407 . G . PASS END=231342407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 231342408 . T . PASS END=231342416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 231342417 . A . PASS END=231342417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 231342418 . G . PASS END=231342418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr1 231342419 . A . PASS END=231342419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr1 231342420 . C . PASS END=231342420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:31,0 chr1 231342421 . T . PASS END=231342421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr1 231342422 . T . PASS END=231342442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1156:0,83,255:35,0 chr1 231342443 . C . PASS END=231342443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr1 231342444 . A . PASS END=231342470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1344:0,87,255:40,0 chr1 231342471 . T . PASS END=231342471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:39,0 chr1 231342472 . C . PASS END=231342480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1435:0,107,255:40,0 chr1 231342481 . C . PASS END=231342481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1398:0,79,255:36,0 chr1 231342482 . A . PASS END=231342507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1266:0,94,255:37,0 chr1 231342508 . T . PASS END=231342508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1260:0,72,255:30,0 chr1 231342509 . A . PASS END=231342509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 231342510 . A . PASS END=231342510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:31,0 chr1 231342511 . A . PASS END=231342528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1159:0,85,255:34,0 chr1 231342529 . A . PASS END=231342536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,82,255:26,0 chr1 231344693 . T . PASS END=231344700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,984:0,84,255:32,0 chr1 231344701 . T . PASS END=231344701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:30,0 chr1 231344702 . T . PASS END=231344710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 231344711 . A . PASS END=231344926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:32:0,90,1264:0,96,255:40,0 chr1 231344927 . A . PASS END=231344927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:34,0 chr1 231344928 . C . PASS END=231344964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:35,0 chr1 231344965 . T . PASS END=231344995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:21:0,60,900:0,62,255:24,0 chr1 231344996 . G . PASS END=231344996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr1 231349561 . G . PASS END=231349564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 231349565 . G . PASS END=231349588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,413:0,33,255:13,0 chr1 231349589 . A . PASS END=231349597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 231349598 . G . PASS END=231349598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr1 231349599 . T . PASS END=231349607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,604:0,41,255:19,0 chr1 231349608 . A . PASS END=231349613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:22,0 chr1 231349614 . A . PASS END=231349614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 231349615 . T . PASS END=231349620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr1 231349621 . C . PASS END=231349621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 231349622 . A . PASS END=231349627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 231349628 . A . PASS END=231349629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 231349630 . C . PASS END=231349665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,818:0,62,255:26,0 chr1 231349666 . C . PASS END=231349667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231349668 . T . PASS END=231349672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 231349673 . C . PASS END=231349684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 231349685 . G . PASS END=231349686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 231349687 . C . PASS END=231349693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 231349694 . C . PASS END=231349694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr1 231349695 . C . PASS END=231349699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 231349700 . C . PASS END=231349700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:29,0 chr1 231349701 . T . PASS END=231349701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 231349702 . C . PASS END=231349702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 231349703 . A . PASS END=231349703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 231349704 . G . PASS END=231349706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 231349707 . T . PASS END=231349707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 231349708 . C . PASS END=231349709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 231349710 . A . PASS END=231349710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:29,0 chr1 231349711 . C . PASS END=231349714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 231349715 . A . PASS END=231349722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 231349723 . G . PASS END=231349728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 231349729 . C . PASS END=231349729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 231349730 . A . PASS END=231349744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 231349745 . G . PASS END=231349745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1115:0,58,255:26,0 chr1 231349746 . A . PASS END=231349746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 231349747 . C . PASS END=231349749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:71:29:0,71,1069:0,71,255:26,0 chr1 231349750 . G . PASS END=231349750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231349751 . G . PASS END=231349754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 231349755 . G . PASS END=231349756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231349757 . C . PASS END=231349757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr1 231349758 . T . PASS END=231349770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr1 231349771 . T . PASS END=231349771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr1 231349772 . T . PASS END=231349876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1148:0,88,255:36,0 chr1 231349877 . T . PASS END=231349887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:33,0 chr1 231349888 . C . PASS END=231349888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 231349889 . G . PASS END=231349904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:31,0 chr1 231349905 . T . PASS END=231349910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1100:0,74,255:26,0 chr1 231349911 . C . PASS END=231349911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231349912 . A . PASS END=231349913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231349914 . C A, 48.70 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=0.460;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,13,0:0.433,0.000:30:10,7,0:7,6,0:47:83,0,50,429,608,1037:255,0,255:15,0:4.8705e+01,8.0247e-05,5.3000e+01,4.2853e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,4,9:9,8,8,5 chr1 231349915 . C . PASS END=231349924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1055:0,74,255:26,0 chr1 231349925 . A . PASS END=231349945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr1 231349946 . G . PASS END=231349947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 231349948 . A . PASS END=231349951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,84,255:18,0 chr1 231349952 . C . PASS END=231349970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,630:0,40,255:18,0 chr1 231349971 . C . PASS END=231349974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:13,0 chr1 231349975 . G . PASS END=231349976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 231349977 . G . PASS END=231349981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 231349982 . C . PASS END=231349982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 231349983 . T . PASS END=231349997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr1 231349998 . C . PASS END=231349998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 231349999 . C . PASS END=231350001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr1 231350002 . A . PASS END=231350002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr1 231351121 . G . PASS END=231351159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,44,255:19,0 chr1 231351160 . G . PASS END=231351164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr1 231351165 . G . PASS END=231351178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr1 231351179 . G . PASS END=231351186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 231360025 . T . PASS END=231360043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1105:0,89,255:37,0 chr1 231360044 . G . PASS END=231360044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 231360045 . A . PASS END=231360160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:37:0,94,1296:0,94,255:40,0 chr1 231361213 . T . PASS END=231361269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:83:0,120,1800:0,200,255:40,0 chr1 231362485 . C . PASS END=231362571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:73:0,120,1800:0,176,255:40,0 chr1 231362719 . C . PASS END=231362813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1110:0,85,255:36,0 chr1 231362814 . C . PASS END=231362814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:28,0 chr1 231364896 . T . PASS END=231364955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:77:0,120,1800:0,229,255:40,0 chr1 231374603 . C . PASS END=231374792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:80:29:0,80,1131:0,80,255:40,2 chr1 231374793 . G . PASS END=231374795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 231374796 . C . PASS END=231374796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231374797 . T . PASS END=231374797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231374798 . C . PASS END=231374808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 231374809 . C . PASS END=231374810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 231374811 . C . PASS END=231374817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 231374818 . G . PASS END=231374836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1063:0,74,255:26,0 chr1 231374837 . T . PASS END=231374841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr1 231374842 . C . PASS END=231374846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 231374847 . G . PASS END=231374852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 231374853 . G . PASS END=231374854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:27,0 chr1 231374855 . C . PASS END=231374855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 231374856 . G . PASS END=231374902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,756:0,61,255:26,0 chr1 231374903 . C . PASS END=231374905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 231374906 . C . PASS END=231374910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 231374911 . G . PASS END=231374911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 231374912 . T . PASS END=231374912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 231374913 . T . PASS END=231374913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 231374914 . C . PASS END=231374919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 231374920 . C . PASS END=231374934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,690:0,57,255:19,0 chr1 231376770 . C . PASS END=231376783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,582:0,40,255:20,0 chr1 231376784 . T . PASS END=231376803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:22,0 chr1 231376804 . A . PASS END=231376804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:21,0 chr1 231376805 . A . PASS END=231376813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,947:0,69,255:26,0 chr1 231376814 . G . PASS END=231376814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231376815 . A . PASS END=231376815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 231376816 . A . PASS END=231376825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:30,0 chr1 231376826 . G . PASS END=231376827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1070:0,63,255:29,0 chr1 231376828 . G . PASS END=231376829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 231376830 . A . PASS END=231376830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1069:0,46,255:27,0 chr1 231376831 . G . PASS END=231376849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1103:0,83,255:30,0 chr1 231376850 . T . PASS END=231376850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr1 231376851 . G . PASS END=231376856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 231376857 . T . PASS END=231376858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:27,0 chr1 231376859 . G . PASS END=231376865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 231376866 . C . PASS END=231376878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr1 231376879 . A . PASS END=231376879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 231376880 . A . PASS END=231376887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,901:0,64,255:26,0 chr1 231376972 . A . PASS END=231376972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 231376978 . G . PASS END=231376978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 231377004 . C . PASS END=231377004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 231377043 . G . PASS END=231377043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1373:0,108,255:36,0 chr1 231377071 . A . PASS END=231377071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 231377078 . C . PASS END=231377078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 231377119 . C . PASS END=231377119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,178,255:40,0 chr1 231377125 . A . PASS END=231377202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,102,1530:0,122,255:40,0 chr1 231386707 . A . PASS END=231386889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,114,1800:0,114,255:40,0 chr1 231393968 . A . PASS END=231393975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,884:0,72,255:26,0 chr1 231393976 . G . PASS END=231394002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:30,0 chr1 231394003 . A . PASS END=231394003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr1 231394004 . C . PASS END=231394007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 231394008 . C . PASS END=231394039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:26,0 chr1 231394040 . G . PASS END=231394040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr1 231394041 . C . PASS END=231394055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 231396253 . C . PASS END=231396253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 231396254 . T . PASS END=231396255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 231396256 . T . PASS END=231396256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 231396257 . C . PASS END=231396258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr1 231396259 . A . PASS END=231396259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:27,0 chr1 231396260 . A . PASS END=231396260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr1 231396261 . G . PASS END=231396261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 231396262 . G . PASS END=231396429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:32:0,91,1227:0,91,255:40,1 chr1 231398469 . C . PASS END=231398593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:41:0,96,1440:0,107,255:40,0 chr1 231398594 . A . PASS END=231398595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr1 231398596 . T . PASS END=231398598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:41:0,81,1215:0,123,255:27,0 chr1 231401024 . T . PASS END=231401024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 231401039 . A . PASS END=231401166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:38:0,81,1272:0,81,255:40,0 chr1 231401458 . A . PASS END=231401470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:50:0,120,1800:0,150,255:40,0 chr1 231401471 . C . PASS END=231401507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,148,255:40,0 chr1 231401508 . T C, 47.50 PASS DP=65;MQ=250.00;MQRankSum=6.822;ReadPosRankSum=4.280;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,27,0:0.415,0.000:65:17,14,0:21,13,0:46:82,0,50,966,1346,2312:255,0,255:32,0:4.7500e+01,9.8886e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,15,11,16:16,22,10,17 chr1 231401509 . G . PASS END=231401533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,161,255:40,0 chr1 231401760 . G . PASS END=231401911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:56:0,120,1800:0,145,255:40,0 chr1 231401915 . C . PASS END=231401915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 231402023 . G . PASS END=231402039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,158,255:40,0 chr1 231402040 . A . PASS END=231402153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,105,1575:0,140,255:40,0 chr1 231403426 . A . PASS END=231403432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 231403433 . C . PASS END=231403443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:24,0 chr1 231403444 . G . PASS END=231403559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1200:0,83,255:40,0 chr1 231403560 . G . PASS END=231403560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:27,0 chr1 231403561 . G . PASS END=231403561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 231403562 . C . PASS END=231403592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,900:0,62,255:26,0 chr1 231403593 . A . PASS END=231403594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 231403595 . A . PASS END=231403602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 231403603 . G . PASS END=231403613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,59,255:19,0 chr1 231403614 . T . PASS END=231403616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr1 231403617 . C . PASS END=231403624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 231403625 . T . PASS END=231403625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr1 231403626 . T . PASS END=231403630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 231403631 . G . PASS END=231403631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 231403632 . G . PASS END=231403646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:15,0 chr1 231403647 . C . PASS END=231403649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 231406496 . G . PASS END=231406496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 231406501 . T . PASS END=231406501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 231406504 . A . PASS END=231406504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 231406505 . T . PASS END=231406505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr1 231406506 . A . PASS END=231406521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:25,0 chr1 231406522 . A . PASS END=231406524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr1 231406525 . T . PASS END=231406525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 231406526 . T . PASS END=231406528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr1 231406529 . C . PASS END=231406529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 231406530 . C . PASS END=231406639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:30:0,90,1058:0,90,255:40,0 chr1 231406640 . C . PASS END=231406640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,7:51:36:51:0,36,1352:0,36,255:40,0 chr1 231406641 . A . PASS END=231406707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1305:0,92,255:40,0 chr1 231406708 . T . PASS END=231406708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1070:0,62,255:28,0 chr1 231406709 . A . PASS END=231406711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 231406712 . A . PASS END=231406730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,74,255:26,0 chr1 231406731 . C . PASS END=231406731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr1 231406732 . C . PASS END=231406732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 231406733 . A . PASS END=231406733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 231406734 . G . PASS END=231406746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:23,0 chr1 231406761 . T . PASS END=231406761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 231408058 . A . PASS END=231408137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,108,1492:0,112,255:40,0 chr1 231409668 . G . PASS END=231409808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:45:0,81,1215:0,96,255:40,0 chr1 231410954 . C . PASS END=231410954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr1 231410967 . A . PASS END=231411066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:63:0,120,1800:0,159,255:40,0 chr1 231411151 . G . PASS END=231411244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,111,1665:0,128,255:40,0 chr1 231411249 . G . PASS END=231411249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,108,1620:0,141,255:36,0 chr1 231411876 . C . PASS END=231411876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 231411881 . A . PASS END=231411942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,1:119:99:90:0,120,1800:0,239,255:40,0 chr1 231413245 . G . PASS END=231413288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:71:0,120,1800:0,205,255:40,0 chr1 231413290 . A . PASS END=231413290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,221,255:40,0 chr1 231413333 . C . PASS END=231413333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:73:0,120,1800:0,186,255:40,0 chr1 231413411 . A . PASS END=231413411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 231413417 . C . PASS END=231413417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr1 231413483 . C . PASS END=231413483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 231413626 . A . PASS END=231413626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1504:0,110,255:40,0 chr1 231413677 . G . PASS END=231413677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 231413687 . G . PASS END=231413687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 231471314 . T . PASS END=231471317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1205:0,99,255:34,0 chr1 231471318 . A . PASS END=231471318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:33,0 chr1 231471319 . C . PASS END=231472122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:34:0,81,1205:0,83,255:40,0 chr1 231472123 . G . PASS END=231472129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,993:0,73,255:26,0 chr1 231472130 . G . PASS END=231472131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 231472132 . G . PASS END=231472132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:25,0 chr1 231472133 . T . PASS END=231472136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,82,255:27,0 chr1 231472137 . G . PASS END=231472140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:26,0 chr1 231472141 . C . PASS END=231472141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:20,0 chr1 231472142 . A . PASS END=231472196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,838:0,69,255:24,0 chr1 231472197 . A . PASS END=231472197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 231472198 . A . PASS END=231472236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,811:0,64,255:25,0 chr1 231472237 . T . PASS END=231472237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 231472238 . C . PASS END=231472244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 231472245 . G . PASS END=231472245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 231472246 . A . PASS END=231472254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 231472255 . T . PASS END=231472255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 231472256 . G . PASS END=231472263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,992:0,78,255:26,0 chr1 231472264 . C . PASS END=231472264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:25,0 chr1 231472265 . C . PASS END=231472298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,71,255:26,0 chr1 231472299 . A . PASS END=231472323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:28,0 chr1 231472324 . G . PASS END=231472324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 231472325 . C . PASS END=231472351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1114:0,80,255:34,0 chr1 231472352 . C . PASS END=231472352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr1 231472353 . C . PASS END=231472372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1194:0,86,255:33,0 chr1 231472373 . T . PASS END=231472373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:32,0 chr1 231472374 . G . PASS END=231472467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1291:0,81,255:40,0 chr1 231472468 . C . PASS END=231472468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:37,0 chr1 231472469 . A . PASS END=231472801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1097:0,82,255:40,0 chr1 231472802 . G . PASS END=231472805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 231472806 . G . PASS END=231472810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 231472811 . G . PASS END=231472821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,84,255:26,0 chr1 231472822 . T . PASS END=231472826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:27,0 chr1 231472827 . C . PASS END=231472831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 231472832 . C . PASS END=231472832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 231472833 . T . PASS END=231472841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 231472842 . C . PASS END=231472850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 231472851 . A . PASS END=231472851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr1 231472852 . C . PASS END=231472856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231472857 . A . PASS END=231472870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr1 231472871 . G . PASS END=231472884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1111:0,87,255:30,0 chr1 231472885 . C . PASS END=231472885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 231472886 . C . PASS END=231472930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:30:0,89,1125:0,89,255:36,0 chr1 231472931 . C . PASS END=231472931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:32,0 chr1 231472932 . C . PASS END=231473083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1181:0,81,255:40,0 chr1 231473084 . C . PASS END=231473096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:60:31:0,60,900:0,91,255:26,0 chr1 231473097 . T . PASS END=231473097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:18,0 chr1 231473098 . G . PASS END=231473099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr1 231473100 . T . PASS END=231473100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,693:0,22,255:16,0 chr1 231473101 . C . PASS END=231473116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 231473117 . A . PASS END=231473120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr1 231473121 . A . PASS END=231473121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr1 231473122 . C . PASS END=231473122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:10,0 chr1 231473123 . T . PASS END=231473125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:17:0,24,360:0,34,255:8,0 chr1 231473126 . C . PASS END=231473134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:14:0,30,450:0,34,255:11,0 chr1 231473135 . T . PASS END=231473135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:11,0 chr1 231473136 . C . PASS END=231473136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:10,0 chr1 231473137 . C . PASS END=231473164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr1 231473165 . A . PASS END=231473165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 231473166 . G . PASS END=231473178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr1 231473179 . A . PASS END=231473179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr1 231473180 . C . PASS END=231473184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr1 231473185 . G . PASS END=231473185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 231473186 . C . PASS END=231473186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 231473187 . G . PASS END=231473198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr1 231473199 . A . PASS END=231473199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 231473200 . G . PASS END=231473222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,592:0,51,255:17,0 chr1 231473223 . A . PASS END=231473223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr1 231473224 . A . PASS END=231473235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr1 231473236 . G . PASS END=231473285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,815:0,61,255:24,0 chr1 231473286 . T . PASS END=231473286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 231473287 . G . PASS END=231473290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 231473291 . G . PASS END=231473291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 231473292 . T . PASS END=231473295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 231473296 . T . PASS END=231473296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,766:0,39,255:22,0 chr1 231473297 . C . PASS END=231473298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 231473299 . G . PASS END=231473299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 231473300 . G . PASS END=231473319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1072:0,80,255:31,0 chr1 231473320 . T . PASS END=231473320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:30,0 chr1 231473321 . C . PASS END=231473376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,983:0,80,255:32,0 chr1 231473377 . G . PASS END=231473377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231473378 . G . PASS END=231473378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 231473379 . T . PASS END=231473389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 231473390 . C . PASS END=231473390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr1 231473391 . T . PASS END=231473403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,895:0,78,255:26,0 chr1 231473404 . G . PASS END=231473406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr1 231473407 . T . PASS END=231473408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 231473409 . A . PASS END=231473415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231473416 . G . PASS END=231473440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr1 231473441 . C . PASS END=231473441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 231473442 . A . PASS END=231473444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 231473445 . T . PASS END=231473487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr1 231473488 . C . PASS END=231473488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 231473489 . C . PASS END=231473491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 231474130 . A . PASS END=231474160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,739:0,62,255:26,0 chr1 231474161 . T . PASS END=231474171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr1 231474172 . T . PASS END=231474185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 231474186 . G . PASS END=231474190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 231474191 . A . PASS END=231474191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 231474192 . G . PASS END=231474213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1202:0,90,255:35,0 chr1 231474214 . C . PASS END=231474214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr1 231474215 . T . PASS END=231474322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:35,0 chr1 231474323 . A . PASS END=231474338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,69,255:26,0 chr1 231474339 . G . PASS END=231474346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,53,255:18,0 chr1 231474347 . C . PASS END=231474350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:18:0,39,585:0,54,255:13,0 chr1 231475515 . G . PASS END=231475537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1130:0,91,255:35,0 chr1 231475538 . A . PASS END=231475538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:34,0 chr1 231475539 . A . PASS END=231475614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:37:0,82,1291:0,82,255:40,0 chr1 231480452 . A . PASS END=231480460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,189,255:40,0 chr1 231483543 . A . PASS END=231483671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,108,1430:0,109,255:40,0 chr1 231483840 . A . PASS END=231483905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:46:0,111,1665:0,128,255:40,0 chr1 231487050 . G . PASS END=231487051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 231487052 . A . PASS END=231487054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 231487055 . C . PASS END=231487076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:25,0 chr1 231487077 . G . PASS END=231487077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 231487078 . A . PASS END=231487078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 231487079 . T . PASS END=231487099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:29,0 chr1 231487100 . G . PASS END=231487100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 231487101 . C . PASS END=231487108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1172:0,83,255:32,0 chr1 231487109 . T . PASS END=231487109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr1 231487110 . G . PASS END=231487124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1169:0,80,255:39,0 chr1 231487125 . A . PASS END=231487125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr1 231487126 . G . PASS END=231487352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:40:0,117,1755:0,120,255:40,0 chr1 231488356 . A . PASS END=231488486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:40:0,109,1460:0,109,255:40,0 chr1 231488487 . C . PASS END=231488523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,185,255:40,0 chr1 231488524 . C T, 49.48 PASS DP=74;MQ=250.00;MQRankSum=7.370;ReadPosRankSum=5.906;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,34,0:0.459,0.000:74:18,18,0:22,16,0:48:84,0,50,1179,1357,2536:255,0,255:37,0:4.9475e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,21,17,17:23,17,15,19 chr1 231488525 . T . PASS END=231488561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:72:0,120,1800:0,178,255:40,0 chr1 231488562 . T . PASS END=231489079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:82:30:0,82,1072:0,82,255:40,0 chr1 231489080 . C . PASS END=231489080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231489081 . A . PASS END=231489085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 231489086 . C . PASS END=231489105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:25:0,75,862:0,75,255:26,0 chr1 231489106 . G . PASS END=231489106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 231489107 . A . PASS END=231489107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 231499580 . C . PASS END=231499580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 231499666 . G . PASS END=231499666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 231500113 . C . PASS END=231500113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 231500134 . T . PASS END=231500134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 231500192 . T . PASS END=231500192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1605:0,119,255:40,0 chr1 231500246 . G . PASS END=231500246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 231500303 . A . PASS END=231500303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 231500332 . C . PASS END=231500332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:78:53:0,78,1170:0,159,255:26,0 chr1 231500353 . A AT, 49.75 PASS DP=52;MQ=250.00;MQRankSum=6.105;ReadPosRankSum=-0.878;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,24,0:0.471,0.000:51:12,16,0:15,8,0:48:75,0,50,613,530,1143:255,0,255:27,35:4.9748e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,25.00,28.00,34.77,59.77,37.77:15,12,13,11:12,15,13,11 chr1 231500426 . G . PASS END=231500426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr1 231500670 . G . PASS END=231500670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr1 231500727 . A . PASS END=231500727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 231500737 . C . PASS END=231500737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 231500831 . A . PASS END=231500831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 231500972 . A . PASS END=231500972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 231501069 . G . PASS END=231501069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr1 231501494 . G . PASS END=231501494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1651:0,119,255:39,0 chr1 231501507 . T . PASS END=231501507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,99,1485:0,132,255:33,0 chr1 231501554 . G . PASS END=231501554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:67:0,120,1800:0,168,255:40,0 chr1 231501597 . C . PASS END=231501597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr1 231501622 . A . PASS END=231501622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 231501723 . A . PASS END=231501723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr1 231501736 . T . PASS END=231501736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,199,255:40,0 chr1 231501786 . T . PASS END=231501786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,202,255:40,0 chr1 231501893 . A . PASS END=231501893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 231502157 . C . PASS END=231502180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,180,255:40,0 chr1 231502181 . A . PASS END=231502221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:70:0,120,1800:0,194,255:40,0 chr1 231502230 . T . LowGQ END=231502230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,12:67:0:67:0,0,1635:255,0,255:40,18 chr1 231503309 . G . PASS END=231503309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,206,255:40,0 chr1 231503315 . C . PASS END=231503382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,142,255:40,0 chr1 231506308 . C . PASS END=231506444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:48:0,103,1745:0,103,255:40,0 chr1 231509726 . C . PASS END=231509845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:39:0,82,1451:0,82,255:40,0 chr1 231509850 . A . PASS END=231509850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr1 231556744 . T . PASS END=231556756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 231556757 . T . PASS END=231556757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 231556758 . T . PASS END=231556793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,801:0,69,255:26,0 chr1 231556794 . G . PASS END=231556798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 231556799 . A . PASS END=231556799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 231556800 . G . PASS END=231556805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 231556806 . C . PASS END=231556812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:28:0,73,966:0,73,255:26,0 chr1 231556813 . G . PASS END=231556817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 231556818 . T . PASS END=231556818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:27,0 chr1 231556819 . G . PASS END=231556819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 231556820 . A . PASS END=231556821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 231556822 . C . PASS END=231556841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:23,0 chr1 231556842 . C . PASS END=231556843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 231556844 . G . PASS END=231556851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 231556852 . G . PASS END=231556852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr1 231556853 . C . PASS END=231556864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 231556865 . G . PASS END=231556865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr1 231556866 . T . PASS END=231556876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,921:0,62,255:25,0 chr1 231556877 . C . PASS END=231556879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 231556880 . C . PASS END=231556889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1047:0,71,255:26,0 chr1 231556890 . T . PASS END=231556893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231556894 . C . PASS END=231556895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,931:0,64,255:26,0 chr1 231556896 . A . PASS END=231556899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1092:0,87,255:30,0 chr1 231556900 . A . PASS END=231556900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:29,0 chr1 231556901 . C . PASS END=231556901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 231556902 . T . PASS END=231556903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr1 231556904 . T . PASS END=231556906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 231556907 . T . PASS END=231556907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 231556908 . G . PASS END=231556916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:29,0 chr1 231556917 . G . PASS END=231556917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr1 231556918 . C . PASS END=231556921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 231556922 . C . PASS END=231556924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr1 231556925 . T . PASS END=231556925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231556926 . C . PASS END=231556926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 231556927 . C . PASS END=231556932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 231556933 . C . PASS END=231556943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 231556944 . C . PASS END=231556945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 231556946 . T . PASS END=231556946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr1 231556947 . G . PASS END=231556948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 231556949 . A . PASS END=231556951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 231556952 . G . PASS END=231556953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 231556954 . G . PASS END=231556993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,848:0,61,255:26,0 chr1 231556994 . A . PASS END=231556994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 231556995 . G . PASS END=231557001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 231557002 . G . PASS END=231557003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 231557004 . C . PASS END=231557013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 231557014 . G . PASS END=231557027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,753:0,49,255:19,0 chr1 231557028 . T . PASS END=231557028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:17,0 chr1 231557029 . C . PASS END=231557033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,638:0,46,255:19,0 chr1 231557034 . A . PASS END=231557034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:14,0 chr1 231557035 . C . PASS END=231557037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 231557038 . C . PASS END=231557038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:33:19:0,33,495:0,41,255:10,0 chr1 231557039 . A . PASS END=231557049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:12:0,24,360:0,36,255:9,0 chr1 231557050 . G . PASS END=231557050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:8,0 chr1 231557051 . A . PASS END=231557052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr1 231557053 . C . PASS END=231557056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr1 231557057 . A . PASS END=231557057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 231557058 . G . PASS END=231557058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 231557059 . C . PASS END=231557059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 231557060 . T . PASS END=231557064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 231557065 . C . PASS END=231557073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 231557074 . G . PASS END=231557074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 231557075 . G . PASS END=231557075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 231557076 . G . PASS END=231557076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 231557077 . C . PASS END=231557079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,246:9,0 chr1 231557080 . C . PASS END=231557081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 231557082 . T . PASS END=231557082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 231557083 . C . PASS END=231557084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:13:10:0,13,242:0,13,242:8,0 chr1 231557085 . G . PASS END=231557087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 231557088 . C . PASS END=231557095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:11,0 chr1 231557096 . C . PASS END=231557096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr1 231557097 . G . PASS END=231557117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,321:0,33,255:11,0 chr1 231557118 . G . PASS END=231557118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 231557119 . C . PASS END=231557127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 231557128 . G . PASS END=231557128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 231557129 . G . PASS END=231557133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:11,0 chr1 231557134 . G . LowGQ END=231557134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,279:14,0,255:9,0 chr1 231557135 . T . PASS END=231557135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 231557136 . T . PASS END=231557136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 231557137 . G . PASS END=231557137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr1 231557138 . C . PASS END=231557138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr1 231557139 . T . PASS END=231557143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr1 231557144 . G . PASS END=231557152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:13:0,23,405:0,23,255:9,0 chr1 231557153 . T . PASS END=231557153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:8,0 chr1 231557154 . T . PASS END=231557194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,243:9,0 chr1 231557195 . T . PASS END=231557195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 231557196 . C . PASS END=231557199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 231557200 . G . PASS END=231557200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 231557201 . C . PASS END=231557209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr1 231557210 . G . PASS END=231557210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 231557211 . C . PASS END=231557215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 231557216 . G . PASS END=231557216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr1 231557217 . C . PASS END=231557219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 231557220 . C . PASS END=231557224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 231557225 . G . PASS END=231557227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 231557228 . G . PASS END=231557322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 231557323 . G . LowGQ END=231557323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr1 231557324 . G . PASS END=231557330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr1 231557331 . T . LowGQ END=231557331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:16,0,132:3,0 chr1 231557332 . G . PASS END=231557335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,217:5,0 chr1 231557336 . C . PASS END=231557336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 231557337 . G . PASS END=231557357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 231557358 . G . PASS END=231557387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 231557388 . C . PASS END=231557409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr1 231557410 . G . PASS END=231557417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:4:0,9,135:0,12,133:3,0 chr1 231557418 . G . PASS END=231557423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:5,0 chr1 231557424 . G . PASS END=231557488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 231557489 . T . LowGQ END=231557489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 231557490 . G . PASS END=231557493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 231557494 . C . PASS END=231557511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr1 231557512 . G . PASS END=231557525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr1 231557526 . G . PASS END=231557572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 231557573 . C . PASS END=231557608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,255:9,0 chr1 231557609 . C . LowGQ END=231557609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:6,0 chr1 231557610 . C . PASS END=231557618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 231557619 . C . PASS END=231557625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr1 231557626 . A . PASS END=231557626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 231557627 . T . PASS END=231557633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,186:0,15,186:5,0 chr1 231557634 . T . LowGQ END=231557634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr1 231558008 . G . PASS END=231558008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 231558011 . C . PASS END=231558011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 231558020 . G . PASS END=231558020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 231558057 . C . PASS END=231558057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 231558071 . G . PASS END=231558071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 231558095 . G . PASS END=231558095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 231558104 . G . PASS END=231558104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 231558140 . G . LowGQ END=231558140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:5,0 chr1 231558150 . T . PASS END=231558150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 231558184 . G . PASS END=231558184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr1 231558199 . G . PASS END=231558199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 231558227 . G . PASS END=231558227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 231558249 . G . PASS END=231558249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 231558289 . C . PASS END=231558289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr1 231558328 . G . PASS END=231558328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 231558354 . G . PASS END=231558354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 231558400 . A . PASS END=231558400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 231558431 . G . PASS END=231558431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 231558535 . A . PASS END=231558535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 231558562 . A . PASS END=231558562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 231558603 . C . PASS END=231558603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 231558793 . A . PASS END=231558793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,191,255:40,0 chr1 231558939 . T . PASS END=231558939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 231559151 . T . PASS END=231559151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1418:0,87,255:37,0 chr1 231559153 . G . PASS END=231559153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 231559224 . G . PASS END=231559224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 231559293 . C . PASS END=231559293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,117,1755:0,144,255:39,0 chr1 231559443 . T . PASS END=231559443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 231559466 . C . PASS END=231559466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,114,1710:0,156,255:38,0 chr1 231559475 . T . PASS END=231559475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,114,1710:0,141,255:38,0 chr1 231559593 . C . PASS END=231559593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 231559803 . G . PASS END=231559803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:107:0,120,1800:0,255,255:40,0 chr1 231559974 . T . PASS END=231559974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 231560201 . G . PASS END=231560202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,181,255:40,0 chr1 231560255 . C . PASS END=231560255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 231560329 . T . PASS END=231560329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 231560378 . A . PASS END=231560378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 231560396 . G . PASS END=231560396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr1 231560401 . C . PASS END=231560401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr1 231560521 . T . PASS END=231560521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr1 231598184 . G . PASS END=231598187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:41:0,96,1488:0,96,255:40,0 chr1 231598188 . A . PASS END=231598188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:40,0 chr1 231598189 . A . PASS END=231598213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1405:0,96,255:40,0 chr1 231664557 . A . PASS END=231664569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr1 231664570 . A . PASS END=231664572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 231665001 . G . PASS END=231665105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,111,1593:0,111,255:40,0 chr1 231672959 . C . PASS END=231673073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,111,1665:0,135,255:40,0 chr1 231678212 . A . PASS END=231678212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1357:0,108,255:36,0 chr1 231678213 . T . PASS END=231678213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:34,0 chr1 231678214 . A . PASS END=231678357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:39:0,96,1410:0,101,255:40,0 chr1 231696874 . G . PASS END=231696992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:60:0,120,1800:0,164,255:40,0 chr1 231696993 . A . PASS END=231697001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,174,255:40,0 chr1 231700274 . C . PASS END=231700277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,894:0,62,255:26,0 chr1 231700278 . C . PASS END=231700279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr1 231700280 . T . PASS END=231700280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr1 231700281 . C . PASS END=231700651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:29:0,84,1064:0,84,255:40,0 chr1 231752390 . A . PASS END=231752455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:50:0,120,1800:0,129,255:40,0 chr1 231762614 . A . PASS END=231762614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 231762615 . T . PASS END=231762615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 231762616 . G . PASS END=231762623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,886:0,72,255:24,0 chr1 231762624 . G . PASS END=231762624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr1 231762625 . G . PASS END=231762633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,71,255:26,0 chr1 231762634 . G . PASS END=231762634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 231762635 . G . PASS END=231762635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 231762636 . G . PASS END=231762642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr1 231762643 . A . PASS END=231762662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,897:0,65,255:26,0 chr1 231762663 . G . PASS END=231762665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 231762666 . T . PASS END=231762666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,806:0,31,255:24,0 chr1 231762667 . G . PASS END=231762675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 231762676 . C . PASS END=231762677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:22,0 chr1 231762678 . C . PASS END=231762680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 231829572 . G . PASS END=231829572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 231829573 . C . PASS END=231829590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:17,0 chr1 231829591 . A . PASS END=231829591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr1 231829592 . C . PASS END=231829599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 231829600 . G . PASS END=231829600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 231829601 . T . PASS END=231829602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 231829603 . C . PASS END=231829603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 231829604 . T . PASS END=231829615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,729:0,54,255:19,0 chr1 231829616 . C . PASS END=231829667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr1 231829668 . G . PASS END=231829668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 231829669 . G . PASS END=231829678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 231829679 . C . PASS END=231829689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 231829690 . C . PASS END=231829691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 231829692 . C . PASS END=231829692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr1 231829693 . A . PASS END=231829709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 231829710 . G . PASS END=231829712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 231829713 . G . PASS END=231829745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:22,0 chr1 231829746 . C . PASS END=231829748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 231829749 . G . PASS END=231829749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 231829750 . G . PASS END=231829750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 231829751 . G . PASS END=231829754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 231829755 . G . PASS END=231829758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr1 231829759 . G . PASS END=231829760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 231829761 . G . PASS END=231829761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 231829762 . T . PASS END=231829765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 231829766 . C . PASS END=231829784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 231829785 . T . PASS END=231829785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 231829786 . G . PASS END=231829790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,676:0,51,255:18,0 chr1 231829791 . G . PASS END=231829791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr1 231829792 . G . PASS END=231829843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,644:0,51,255:18,0 chr1 231829844 . A . PASS END=231829844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 231829845 . C . PASS END=231829846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 231829847 . T . PASS END=231829847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 231829848 . C . PASS END=231829855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 231829856 . T . PASS END=231829856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:13,0 chr1 231829857 . T . PASS END=231829857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 231829858 . T . PASS END=231829858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 231829859 . G . PASS END=231829861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 231829862 . A . PASS END=231829862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 231829863 . T . PASS END=231829869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 231829870 . C . PASS END=231829870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 231829871 . A . PASS END=231829873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 231829874 . G . PASS END=231829874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 231829875 . G . PASS END=231829875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 231829876 . T . PASS END=231829876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 231829877 . G . PASS END=231829893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:17,0 chr1 231829894 . C . PASS END=231829900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr1 231829901 . A . PASS END=231829949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,493:0,41,255:19,0 chr1 231829950 . C . PASS END=231829958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 231829959 . G . PASS END=231829959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 231829960 . T . PASS END=231829960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 231829961 . T . PASS END=231829961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 231829962 . C . PASS END=231829980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 231829981 . C . PASS END=231829990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 231829991 . G . PASS END=231830003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr1 231830004 . G . PASS END=231830004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 231830005 . A . PASS END=231830005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 231830006 . G . PASS END=231830013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 231830014 . T . PASS END=231830022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 231830023 . A . PASS END=231830023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 231830024 . G . PASS END=231830024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 231830025 . C . PASS END=231830034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 231830035 . G . PASS END=231830047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr1 231830048 . T . PASS END=231830048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,654:0,24,255:18,0 chr1 231830049 . T . PASS END=231830087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr1 231830088 . T . PASS END=231830130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 231830131 . C . PASS END=231830132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,336:0,22,255:11,0 chr1 231830133 . T . PASS END=231830140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 231830141 . A . PASS END=231830141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 231830142 . T . PASS END=231830147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 231830148 . T . PASS END=231830148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 231830149 . C . PASS END=231830149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr1 231830150 . T . PASS END=231830152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr1 231830153 . C . PASS END=231830158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 231830159 . T . PASS END=231830159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:10,0 chr1 231830160 . C . PASS END=231830160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 231830161 . T . PASS END=231830161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr1 231830162 . G . PASS END=231830164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 231830165 . G . PASS END=231830174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,360:0,33,255:11,0 chr1 231830175 . G . PASS END=231830177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 231830178 . A . PASS END=231830178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 231830179 . A . PASS END=231830181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 231830182 . A . PASS END=231830182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:8,0 chr1 231830183 . G . PASS END=231830183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 231830184 . A . PASS END=231830184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr1 231830185 . A . PASS END=231830194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 231830195 . C . PASS END=231830197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr1 231830198 . T . PASS END=231830198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 231830199 . C . PASS END=231830227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr1 231830228 . C . PASS END=231830245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 231830246 . A . PASS END=231830246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 231830247 . A . PASS END=231830298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,560:0,44,255:19,0 chr1 231830299 . C . PASS END=231830306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr1 231830307 . T . PASS END=231830309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 231830310 . T . PASS END=231830327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr1 231830328 . C . PASS END=231830332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 231830333 . T . PASS END=231830333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:24,0 chr1 231830334 . T . PASS END=231830349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr1 231830350 . G . PASS END=231830371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr1 231830372 . G . PASS END=231830373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr1 231830374 . C . PASS END=231830374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 231830375 . A . PASS END=231830375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1030:0,43,255:25,0 chr1 231830376 . T . PASS END=231830387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1012:0,90,255:30,0 chr1 231830388 . C . PASS END=231830388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr1 231830389 . A . PASS END=231830389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr1 231830390 . G . PASS END=231830485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1081:0,82,255:38,0 chr1 231830486 . A . PASS END=231830486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr1 231830487 . C . PASS END=231830489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 231830490 . T . PASS END=231830495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231830496 . G . PASS END=231830496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 231830497 . G . PASS END=231830549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,884:0,63,255:26,0 chr1 231830550 . A . PASS END=231830550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 231830551 . G . PASS END=231830551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 231837701 . G . PASS END=231837781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:87:0,120,1800:0,219,255:40,0 chr1 231856594 . G . PASS END=231856640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,144,255:40,0 chr1 231856693 . G . PASS END=231856818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,115,1800:0,115,255:40,0 chr1 231858285 . C . PASS END=231858347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:76:0,120,1800:0,177,255:40,0 chr1 231885672 . C . PASS END=231885679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,848:0,69,255:26,0 chr1 231885680 . T . PASS END=231885710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,906:0,81,255:33,0 chr1 231885711 . A . PASS END=231885711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1062:0,66,255:30,0 chr1 231885712 . G . PASS END=231885748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1194:0,86,255:33,0 chr1 231885749 . C . PASS END=231885749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr1 231885750 . C . PASS END=231885795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:32,0 chr1 231885796 . T . PASS END=231885796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 231885797 . G . PASS END=231885802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 231885803 . C . PASS END=231885826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:26,0 chr1 231902886 . G . PASS END=231903015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:43:0,81,1215:0,105,255:40,0 chr1 231906581 . A . PASS END=231906588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr1 231906589 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=3.077;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:9,8,0:4,5,0:48:85,0,50,465,436,901:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,10,3:8,5,5,8 chr1 231906590 . G . PASS END=231906595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,893:0,64,255:26,0 chr1 231906596 . C . PASS END=231906612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr1 231906613 . T . PASS END=231906613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 231906614 . G . PASS END=231906626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:35,0 chr1 231906627 . A . PASS END=231906696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1126:0,85,255:35,0 chr1 231906697 . C . PASS END=231906700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 231906701 . C . PASS END=231906715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:30,0 chr1 231906716 . T . PASS END=231906716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:30,0 chr1 231906717 . C . PASS END=231906734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1196:0,86,255:32,0 chr1 231906735 . A . PASS END=231906735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1033:0,63,255:26,0 chr1 231906736 . G . PASS END=231906742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 231906743 . A . PASS END=231906748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 231906749 . T . PASS END=231906752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:27,0 chr1 231906753 . A . PASS END=231906753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 231906754 . G . PASS END=231906755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:28,0 chr1 231906756 . A . PASS END=231906757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 231906758 . A . PASS END=231906809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1147:0,80,255:34,0 chr1 231906810 . T . PASS END=231906810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:32,0 chr1 231906811 . A . PASS END=231906826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1202:0,86,255:33,0 chr1 231910385 . G . PASS END=231910479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1024:0,81,255:40,1 chr1 231910480 . T . PASS END=231910480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:72:41:0,72,1362:0,72,255:35,1 chr1 231910481 . T . PASS END=231910489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:37:0,85,1350:0,85,255:36,0 chr1 231910490 . T . PASS END=231910490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr1 231910491 . G . PASS END=231910493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 231910494 . G . PASS END=231910494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:30,0 chr1 231910495 . G . PASS END=231910512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:35,0 chr1 231910513 . C . PASS END=231910532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 231910533 . G . PASS END=231910536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr1 231910537 . C . PASS END=231910543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:36:22:0,36,540:0,49,255:13,0 chr1 231910544 . A . PASS END=231910552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:16,0 chr1 231910553 . T . PASS END=231910561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr1 231910562 . A . PASS END=231910562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:11,0 chr1 231910563 . G . PASS END=231910563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 231930988 . C . PASS END=231931010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,221,255:40,0 chr1 231931011 . T . PASS END=231931042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,174,255:40,0 chr1 231935854 . G . PASS END=231935956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,124,255:40,0 chr1 231948976 . G . PASS END=231949052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,148,255:40,0 chr1 231954075 . G . PASS END=231954107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1350:0,93,255:40,0 chr1 231954108 . A . PASS END=231954144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,130,255:40,0 chr1 231954145 . G A, 50.00 PASS DP=59;MQ=249.80;MQRankSum=6.148;ReadPosRankSum=-0.796;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,30,0:0.508,0.000:59:17,15,0:12,15,0:48:85,0,50,1007,1035,2042:255,0,255:28,0:5.0000e+01,6.5233e-05,5.2993e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,18,12:10,19,11,19 chr1 231954146 . G . PASS END=231954182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,150,255:40,0 chr1 231954183 . G . PASS END=231954247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:34:0,87,1211:0,91,255:40,0 chr1 231954248 . C . PASS END=231954248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1194:0,71,255:28,0 chr1 231954249 . A . PASS END=231954254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr1 231954255 . C . PASS END=231954264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:26,0 chr1 231954265 . T . PASS END=231954268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,59,255:19,0 chr1 231954269 . T . PASS END=231954271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:36:23:0,36,540:0,53,255:13,0 chr1 232002269 . G . PASS END=232002270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 232002271 . T . PASS END=232002324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,948:0,81,255:38,0 chr1 232094574 . A . PASS END=232094638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:78:0,120,1800:0,222,255:40,0 chr1 232144531 . C . PASS END=232144545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr1 232144546 . G . PASS END=232144560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:30,0 chr1 232144561 . G . PASS END=232144597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1111:0,90,255:32,0 chr1 232144598 . A T, 49.70 PASS DP=34;MQ=249.35;MQRankSum=4.330;ReadPosRankSum=0.776;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,16,0:0.471,0.000:34:8,7,0:10,9,0:48:84,0,50,543,636,1179:255,0,255:17,0:4.9696e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,11,5:12,6,8,8 chr1 232144599 . G . PASS END=232144635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1395:0,87,255:36,0 chr1 232144636 . A . PASS END=232144849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1332:0,81,255:40,0 chr1 232144850 . G . PASS END=232144886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1099:0,85,255:34,0 chr1 232144887 . A G, 48.91 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=0.171;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:10,7,0:8,7,0:47:84,0,50,501,644,1144:255,0,255:16,0:4.8908e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,4,10:5,13,5,9 chr1 232144888 . G . PASS END=232144890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 232144891 . T . PASS END=232144900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:25,0 chr1 232162181 . G . PASS END=232162299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:38:0,84,1260:0,89,255:40,0 chr1 232162300 . T . PASS END=232162300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:38:0,78,1170:0,98,255:25,0 chr1 232172438 . A . PASS END=232172442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,852:0,69,255:25,0 chr1 232172443 . C . PASS END=232172568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,986:0,81,255:40,0 chr1 232172569 . C . PASS END=232172576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:27:0,66,990:0,74,255:24,0 chr1 232172577 . A . PASS END=232172577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 232534873 . C . PASS END=232534986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:38:0,90,1350:0,104,255:40,0 chr1 232534987 . T . PASS END=232534987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:29,0 chr1 232534988 . T . PASS END=232534992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:30,0 chr1 232534993 . T . PASS END=232535004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:30,0 chr1 232535005 . C . PASS END=232535018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,955:0,67,255:24,0 chr1 232535019 . C . PASS END=232535019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 232538138 . C . PASS END=232538219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:39:0,94,1406:0,94,255:40,0 chr1 232539194 . C . PASS END=232539197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1227:0,99,255:33,0 chr1 232539198 . T . PASS END=232539198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:31,0 chr1 232539199 . T . PASS END=232539222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1135:0,83,255:37,0 chr1 232539223 . G . PASS END=232539223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr1 232539224 . C . PASS END=232539278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:86:34:0,86,1194:0,86,255:40,0 chr1 232539279 . G . PASS END=232539279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:30,0 chr1 232539280 . C . PASS END=232539289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:32,0 chr1 232539290 . A . PASS END=232539291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1164:0,61,255:28,0 chr1 232539292 . G . PASS END=232539292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 232539293 . G . PASS END=232539313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,60,255:26,0 chr1 232539314 . T . PASS END=232539317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 232539871 . C . PASS END=232539924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:65:0,120,1800:0,179,255:40,0 chr1 232551240 . C . PASS END=232551371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:35:0,93,1365:0,95,255:40,0 chr1 232561335 . T . PASS END=232561353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr1 232561354 . G . PASS END=232561386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,635:0,48,255:19,0 chr1 232561387 . G . PASS END=232561399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr1 232561400 . G . PASS END=232561400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:23,0 chr1 232561401 . T . PASS END=232561412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:26,0 chr1 232561413 . G . PASS END=232561426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 232561427 . A . PASS END=232561427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 232561428 . G . PASS END=232561440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:27,0 chr1 232561441 . C . PASS END=232561442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232561443 . C . PASS END=232561444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 232561445 . G . PASS END=232561464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 232561465 . G . PASS END=232561465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 232561466 . G . PASS END=232561470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232561471 . C . PASS END=232561513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,71,255:26,0 chr1 232561514 . T . PASS END=232561514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr1 232561515 . A . PASS END=232561521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:20,0 chr1 232561522 . C . PASS END=232561553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,621:0,43,255:18,0 chr1 232561554 . A . PASS END=232561554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:14,0 chr1 232564157 . C . PASS END=232564157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr1 232564158 . T . PASS END=232564163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr1 232564164 . C . PASS END=232564164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 232564165 . G . PASS END=232564168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232564169 . C . PASS END=232564169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr1 232564170 . T . PASS END=232564189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1156:0,88,255:34,0 chr1 232564190 . A . PASS END=232564190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr1 232564191 . G . PASS END=232564275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1157:0,81,255:40,2 chr1 232564276 . T . PASS END=232564297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,886:0,61,255:26,0 chr1 232564298 . C . PASS END=232564305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,630:0,59,255:15,0 chr1 232564306 . A . PASS END=232564308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:22:0,39,585:0,66,255:13,0 chr1 232564309 . T . PASS END=232564309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:12,2 chr1 232564310 . C . PASS END=232564310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,631:0,10,255:12,0 chr1 232567993 . C . PASS END=232567995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,432:0,3,255:12,0 chr1 232567996 . G . PASS END=232567998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 232567999 . C . PASS END=232568003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 232568004 . A . PASS END=232568004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 232568005 . G . PASS END=232568023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr1 232568024 . G . PASS END=232568047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr1 232568048 . T . PASS END=232568048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:22,0 chr1 232568049 . C . PASS END=232568061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:23,0 chr1 232568062 . T . PASS END=232568062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr1 232568063 . A . PASS END=232568069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 232568070 . C . PASS END=232568070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 232568071 . A . PASS END=232568091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,839:0,63,255:23,0 chr1 232568092 . G . PASS END=232568094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 232568095 . T . PASS END=232568103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 232568104 . G . PASS END=232568107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 232568108 . C . PASS END=232568113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 232568114 . C . PASS END=232568129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 232568130 . G . PASS END=232568183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,868:0,61,255:26,0 chr1 232568184 . G . PASS END=232568184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,0 chr1 232568185 . T . PASS END=232568186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 232568187 . A . PASS END=232568187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 232568188 . G . PASS END=232568193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 232568194 . G . PASS END=232568199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 232568200 . C . PASS END=232568200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 232568201 . C . PASS END=232568217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr1 232569160 . C . PASS END=232569305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:33:0,87,1305:0,99,255:40,0 chr1 232569306 . A . PASS END=232569306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1227:0,53,255:26,0 chr1 232569307 . G . PASS END=232569312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1225:0,86,255:31,0 chr1 232574854 . C . LowGQ END=232574883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,22:0,0,31:3,0 chr1 232574884 . C . PASS END=232574906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr1 232574907 . G . PASS END=232574920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 232574921 . T C, 30.76 PASS DP=4;MQ=250.00;MQRankSum=1.026;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,2,0:0.500,0.000:4:1,2,0:1,0,0:31:66,0,50,72,72,143:66,0,66:2,0:3.0757e+01,3.6722e-03,5.3004e+01,7.1546e+01,1.0630e+02,1.4608e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,1,2,0:2,0,2,0 chr1 232574922 . G . PASS END=232574936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 232574937 . C . PASS END=232574940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 232574941 . G . PASS END=232574958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 232574959 . T . PASS END=232574970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr1 232574971 . C . LowGQ END=232574971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 232574972 . C . PASS END=232574991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:5,0 chr1 232574992 . G . PASS END=232575008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr1 232575009 . G . PASS END=232575012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 232575013 . T . PASS END=232575019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 232575020 . G . PASS END=232575038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:13,0 chr1 232575039 . G . PASS END=232575063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr1 232575064 . G . PASS END=232575092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:26,0 chr1 232575093 . G . PASS END=232575093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:26,0 chr1 232575094 . T . PASS END=232575104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr1 232575105 . C . PASS END=232575105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 232575106 . C . PASS END=232575107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr1 232575108 . T . PASS END=232575109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1024:0,76,255:29,0 chr1 232575110 . T . PASS END=232575242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:31:0,88,1195:0,88,255:40,0 chr1 232577037 . G . PASS END=232577140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:58:0,120,1800:0,167,255:40,0 chr1 232577514 . C . PASS END=232577603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:35:0,81,1215:0,89,255:40,0 chr1 232577604 . G . PASS END=232577614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr1 232579348 . C . PASS END=232579431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,109,1504:0,109,255:40,0 chr1 232581275 . C . PASS END=232581284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr1 232581285 . C . PASS END=232581311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr1 232581312 . T . PASS END=232581312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 232581313 . T . PASS END=232581332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,706:0,57,255:19,0 chr1 232581333 . C . PASS END=232581364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 232581365 . T . PASS END=232581390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 232581391 . T . PASS END=232581391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:14,0 chr1 232581392 . C . PASS END=232581406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr1 232581407 . A . PASS END=232581407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 232581408 . G . PASS END=232581472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:19,0 chr1 232581473 . G . PASS END=232581481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 232581482 . C . PASS END=232581489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:15,0 chr1 232581490 . T . PASS END=232581490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,444:0,31,255:14,0 chr1 232581491 . T . PASS END=232581497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:15,0 chr1 232581498 . C . PASS END=232581498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 232581499 . C . PASS END=232581508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr1 232581509 . A . PASS END=232581509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr1 232581510 . T . PASS END=232581520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 232581521 . T . PASS END=232581532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 232596633 . C . PASS END=232596903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:30:0,80,1093:0,80,255:40,0 chr1 232596904 . C . PASS END=232596907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 232597939 . C . PASS END=232597949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,173,255:40,0 chr1 232597950 . T . PASS END=232597980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,165,255:40,0 chr1 232600586 . T . PASS END=232600869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:36:0,87,1304:0,94,255:40,0 chr1 232600870 . C . PASS END=232600870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr1 232600871 . C . PASS END=232601162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,99,1360:0,100,255:40,0 chr1 232607117 . C . PASS END=232607254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1183:0,86,255:40,0 chr1 232607255 . A . PASS END=232607274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,72,255:26,0 chr1 232615373 . C . PASS END=232615454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:40:0,90,1350:0,107,255:40,0 chr1 232615455 . G . PASS END=232615469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:25,0 chr1 232615470 . G . PASS END=232615476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 232619538 . T . PASS END=232619709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:33:0,81,1215:0,99,255:40,2 chr1 232619710 . C . PASS END=232619712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 232626620 . C . PASS END=232626808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:84:33:0,84,1260:0,97,255:40,0 chr1 232629273 . C . PASS END=232629406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,108,1649:0,108,255:40,0 chr1 232649603 . C . PASS END=232649756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:33:0,93,1395:0,95,255:40,0 chr1 232649757 . T . PASS END=232649757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1139:0,44,255:30,0 chr1 232649758 . T . PASS END=232650062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1103:0,80,255:40,0 chr1 232650063 . G . PASS END=232650063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:27,0 chr1 232650064 . A . PASS END=232650091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1247:0,86,255:35,0 chr1 232650092 . A . PASS END=232650092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:35,0 chr1 232650093 . A . PASS END=232650147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:34:0,90,1350:0,101,255:38,0 chr1 232650148 . T . PASS END=232650149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1271:0,72,255:33,0 chr1 232650150 . C . PASS END=232650180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1226:0,91,255:36,0 chr1 232650181 . T . PASS END=232650181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:33,0 chr1 232650182 . G . PASS END=232650231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1049:0,89,255:37,0 chr1 232650232 . T . PASS END=232650232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:34,0 chr1 232650233 . C . PASS END=232650593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:35:0,92,1108:0,92,255:40,1 chr1 232650594 . G . PASS END=232650594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:35,0 chr1 232650595 . A . PASS END=232650712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:37:0,85,1402:0,85,255:40,0 chr1 232650713 . G . PASS END=232650749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:46:0,114,1759:0,114,255:40,0 chr1 232650750 . A G, 197.48 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,27,0:0,23,0:147:235,150,0,1930,150,1930:255,150,0:0,0:1.9748e+02,1.4748e+02,0.0000e+00,4.5000e+02,1.8225e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,27:0,0,22,28 chr1 232650751 . G . PASS END=232650787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1776:0,120,255:40,0 chr1 232650788 . C . PASS END=232651056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,865:0,81,255:40,0 chr1 232651057 . T . PASS END=232651075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,850:0,64,255:26,0 chr1 232651076 . G . PASS END=232651077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 232651078 . T . PASS END=232651078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 232651079 . C . PASS END=232651085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 232940770 . A . PASS END=232940790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:37:0,98,1344:0,98,255:40,0 chr1 232940791 . A . PASS END=232940865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:48:0,86,1800:0,86,255:40,0 chr1 232940866 . C . PASS END=232941046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:38:0,83,1343:0,83,255:40,0 chr1 232941047 . G . PASS END=232941047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:33,0 chr1 232941048 . C . PASS END=232941073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:34:0,81,1215:0,86,255:34,0 chr1 232941074 . C . PASS END=232941090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:26:0,71,1061:0,71,255:26,0 chr1 232941091 . C . PASS END=232941095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr1 232941096 . T . PASS END=232941101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:20,0 chr1 232941102 . G . PASS END=232941102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 232941103 . C . PASS END=232941115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 232941116 . T . PASS END=232941120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 232941121 . C . PASS END=232941121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 232941122 . G . PASS END=232941122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 232941123 . G . PASS END=232941123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 232941124 . T . PASS END=232941125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 232941126 . T . PASS END=232941126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:23,0 chr1 232941127 . C . PASS END=232941134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,908:0,72,255:24,0 chr1 232941135 . A . PASS END=232941135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,699:0,42,255:20,0 chr1 232941136 . C . PASS END=232941151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,870:0,72,255:24,0 chr1 232941152 . T . PASS END=232941152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr1 232941153 . C T, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.128;ReadPosRankSum=2.858;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:7,10,0:5,2,0:48:85,0,50,429,429,858:255,0,255:12,0:5.0000e+01,6.5233e-05,5.3000e+01,4.2914e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,4,8:6,6,4,8 chr1 232941154 . T . PASS END=232941156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 232941157 . T . PASS END=232941157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,703:0,44,255:24,0 chr1 232941158 . T . PASS END=232941166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 232941167 . C . PASS END=232941169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr1 232941170 . C . PASS END=232941172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232941173 . C . PASS END=232941186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr1 232941187 . G . PASS END=232941188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 232941189 . A . PASS END=232941190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 232941191 . C . PASS END=232941199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:25,0 chr1 232941200 . C . PASS END=232941200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 232941201 . G . PASS END=232941203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 232941204 . C . PASS END=232941204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232941205 . T . PASS END=232941205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:26,0 chr1 232941206 . C . PASS END=232941208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232941209 . T . PASS END=232941209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr1 232941210 . G . PASS END=232941216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 232941217 . C . PASS END=232941218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr1 232941219 . G . PASS END=232941222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 232941223 . T . PASS END=232941223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 232941224 . T . PASS END=232941234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 232941235 . C . PASS END=232941235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr1 232941236 . T . PASS END=232941239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 232941240 . G . PASS END=232941240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:27,0 chr1 232941241 . G . PASS END=232941241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1084:0,55,255:28,0 chr1 232941242 . T . PASS END=232941244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1083:0,60,255:29,0 chr1 232941245 . A . PASS END=232941245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 232941246 . C . PASS END=232941246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 232941247 . T . PASS END=232941247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 232941248 . G . PASS END=232941248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 232941249 . G . PASS END=232941249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 232941250 . G . PASS END=232941250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 232941251 . T . PASS END=232941251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 232941252 . G . PASS END=232941253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1067:0,60,255:27,0 chr1 232941254 . G . PASS END=232941254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 232941255 . T . PASS END=232941255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,975:0,76,255:27,0 chr1 232941256 . T . PASS END=232941256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 232941257 . T . PASS END=232941257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 232941258 . G . PASS END=232941263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 232941264 . C . PASS END=232941267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:28,0 chr1 232941268 . C . PASS END=232941270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 232941271 . C . PASS END=232941272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 232941273 . G . PASS END=232941273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:26,0 chr1 232941274 . C . PASS END=232941274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 232941275 . C . PASS END=232941275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 232941276 . G . PASS END=232941277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 232941278 . C . PASS END=232941278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr1 232941279 . C . PASS END=232941279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 232941280 . C . PASS END=232941315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,937:0,65,255:26,0 chr1 232941316 . G . PASS END=232941316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232941317 . A . PASS END=232941322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,999:0,81,255:27,0 chr1 232941323 . A . PASS END=232941353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,917:0,70,255:26,0 chr1 232941354 . G T, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.551;ReadPosRankSum=3.196;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,18,0:0.600,0.000:30:6,6,0:6,12,0:47:85,0,47,636,429,1065:255,0,255:10,0:5.0000e+01,8.3354e-05,5.0378e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,9,9:2,10,9,9 chr1 232941355 . T . PASS END=232941368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 232941369 . C . PASS END=232941373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 232941374 . G . PASS END=232941376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 232941377 . T . PASS END=232941391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 232941392 . C . PASS END=232941405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr1 232941406 . C . PASS END=232941408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 232941409 . C . PASS END=232941414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 232941415 . G . PASS END=232941415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 232941416 . G . PASS END=232941423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr1 232941424 . G . PASS END=232941424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr1 232941425 . C . PASS END=232941453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1116:0,87,255:33,0 chr1 232941454 . A . PASS END=232941454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 232941455 . T . PASS END=232941464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 232941465 . T . PASS END=232941465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 232941466 . C . PASS END=232941469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 232941470 . G . PASS END=232941470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 232941471 . C . PASS END=232941474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 232941475 . T . PASS END=232941475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:29,0 chr1 232941476 . C . PASS END=232941498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:33,0 chr1 232941499 . G . PASS END=232941522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:62:25:0,62,914:0,62,255:26,0 chr1 232941523 . C . PASS END=232941523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:22,0 chr1 232941524 . G . PASS END=232941567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 232941568 . C . PASS END=232941568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 232941569 . C . PASS END=232941569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 232941570 . G . PASS END=232941570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr1 232941571 . A . PASS END=232941583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,876:0,61,255:26,0 chr1 232941584 . A . PASS END=232941584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:18,0 chr1 232941585 . G . PASS END=232941618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,832:0,61,255:25,0 chr1 232941619 . G . PASS END=232941619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 232941620 . C . PASS END=232941620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 232941621 . A . PASS END=232941621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 232941622 . G . PASS END=232941622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:22,0 chr1 232941623 . C . PASS END=232941623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 232941624 . G . PASS END=232941624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,841:0,47,255:22,0 chr1 232941625 . C . PASS END=232941630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 232941631 . G . PASS END=232941631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:22,0 chr1 232941632 . T . PASS END=232941637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr1 232941638 . G . PASS END=232941638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 232941639 . G . PASS END=232941639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 232941640 . C . PASS END=232941640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 232941641 . C . PASS END=232941641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 232941642 . G . PASS END=232941644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:23,0 chr1 232941645 . C . PASS END=232941647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 232941648 . C . PASS END=232941648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr1 232941649 . T . PASS END=232941650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 232941651 . C . PASS END=232941652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 232941653 . G . PASS END=232941655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 232941656 . G . PASS END=232941656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 232941657 . C . PASS END=232941663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 232941664 . C . PASS END=232941664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,823:0,23,255:23,0 chr1 232941665 . G . PASS END=232941665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 232941666 . T . PASS END=232941667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 232941668 . A . PASS END=232941670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 232941671 . G . PASS END=232941671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,741:0,22,255:20,0 chr1 232941672 . G . PASS END=232941673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr1 232941674 . G . PASS END=232941674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr1 232941675 . A . PASS END=232941683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:25,0 chr1 232941684 . C . PASS END=232941684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:21,0 chr1 232941685 . C . PASS END=232941687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,945:0,62,255:22,0 chr1 232941688 . C . PASS END=232941688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,837:0,36,255:21,0 chr1 232941689 . A . PASS END=232941689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 232941690 . T . PASS END=232941690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 232941691 . A . PASS END=232941695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,740:0,66,255:22,0 chr1 232941696 . A . PASS END=232941696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr1 232941697 . G . PASS END=232941697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr1 232941698 . T . PASS END=232941698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 232941699 . G . PASS END=232941701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 232941702 . C . PASS END=232941731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,668:0,43,255:19,0 chr1 232941732 . C . PASS END=232941735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:22,0 chr1 232941736 . C . PASS END=232941736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 232941737 . T . PASS END=232941737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr1 232941738 . G . PASS END=232941745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:24,0 chr1 232941746 . T . PASS END=232941746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr1 232941747 . G . PASS END=232941748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 232941749 . G . PASS END=232941749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 232941750 . A . PASS END=232941761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr1 232941762 . G . PASS END=232941762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 232941763 . A . PASS END=232941793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:24:0,67,857:0,67,255:26,0 chr1 232941794 . G . PASS END=232941794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:26,0 chr1 232941795 . C . PASS END=232941807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 232941808 . G . PASS END=232941808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 232941809 . C . PASS END=232941809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 232941810 . G . PASS END=232941839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1109:0,87,255:31,0 chr1 232941840 . A . PASS END=232941840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1001:0,49,255:29,0 chr1 232941841 . C . PASS END=232941853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1210:0,96,255:33,0 chr1 232941854 . A . PASS END=232941854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr1 232941855 . G . PASS END=232943210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:88:33:0,88,1312:0,88,255:40,0 chr1 232943211 . A . PASS END=232943211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1785:0,71,255:40,0 chr1 232943212 . G . PASS END=232943913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,118,1493:0,118,255:40,0 chr1 233086457 . A . PASS END=233086490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,258:0,21,255:8,0 chr1 233091303 . G . PASS END=233091327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:91:46:0,91,1404:0,91,255:40,0 chr1 233091328 . T . PASS END=233091328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,4:64:59:64:0,59,1983:0,59,255:40,0 chr1 233091329 . A . PASS END=233091442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:93:37:0,93,1395:0,102,255:40,0 chr1 233091443 . C . PASS END=233091444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1225:0,69,255:31,1 chr1 233091445 . G . PASS END=233091445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:31,0 chr1 233091446 . G . PASS END=233091450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:33:0,84,1205:0,88,255:31,0 chr1 233091451 . T . PASS END=233091465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:64:27:0,64,939:0,64,255:26,0 chr1 233092093 . G . PASS END=233092109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,901:0,67,255:26,0 chr1 233092110 . G . PASS END=233092123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:31,0 chr1 233092124 . C . PASS END=233092124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 233092125 . G . PASS END=233092170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:33:0,81,1186:0,81,255:40,0 chr1 233092171 . A . PASS END=233092171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:30,0 chr1 233092172 . C . PASS END=233092180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:31,0 chr1 233092181 . T . PASS END=233092193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:26,0 chr1 233105655 . G . PASS END=233105659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 233105660 . C . PASS END=233105666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr1 233105667 . A . PASS END=233105667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 233105668 . G . PASS END=233105675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr1 233105676 . G . PASS END=233105676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 233105677 . G . PASS END=233105680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 233105681 . A . PASS END=233105681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr1 233105682 . A . PASS END=233105682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,956:0,84,255:28,0 chr1 233105683 . G . PASS END=233105683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 233105684 . A . PASS END=233105716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:31:0,88,1103:0,88,255:37,0 chr1 233105717 . G . PASS END=233105717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:35,0 chr1 233105718 . C . PASS END=233105824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:37:0,96,1388:0,98,255:40,0 chr1 233105825 . A . PASS END=233105825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:31,0 chr1 233105826 . G . PASS END=233105835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1189:0,91,255:33,0 chr1 233105836 . G . PASS END=233105836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr1 233105837 . A . PASS END=233105849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1283:0,92,255:36,0 chr1 233105850 . G . PASS END=233105850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 233105851 . T . PASS END=233105864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1332:0,92,255:35,0 chr1 233112088 . T . PASS END=233112107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,723:0,60,255:25,0 chr1 233112108 . A . PASS END=233112108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:25,0 chr1 233112109 . G . PASS END=233112110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 233112111 . C . PASS END=233112117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr1 233112118 . A . PASS END=233112118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 233112119 . A . PASS END=233112173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,903:0,81,255:40,0 chr1 233112174 . G . PASS END=233112174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr1 233112175 . C . PASS END=233112229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,86,255:36,0 chr1 233112230 . C . PASS END=233112248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,74,255:25,0 chr1 233112249 . C . PASS END=233112270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:19,0 chr1 233113909 . G . PASS END=233114167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:36:0,81,1215:0,95,255:40,0 chr1 233114168 . A . PASS END=233114174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:31:0,60,1125:0,60,255:26,0 chr1 233120050 . T . PASS END=233120051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,850:0,75,255:25,0 chr1 233120052 . A . PASS END=233120052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 233120053 . C . PASS END=233120081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,889:0,62,255:26,0 chr1 233120082 . C . PASS END=233120082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 233120083 . C . PASS END=233120083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 233120084 . G . PASS END=233120101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:29,0 chr1 233120102 . T . PASS END=233120102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 233120103 . C . PASS END=233120115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1119:0,87,255:30,0 chr1 233120116 . T . PASS END=233120116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:12:30:0,12,889:0,12,255:28,0 chr1 233120117 . C . PASS END=233120140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1103:0,84,255:30,0 chr1 233120141 . T . PASS END=233120187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr1 233120188 . G . PASS END=233120188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 233120189 . G . PASS END=233120189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 233120190 . T . PASS END=233120223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 233121700 . T . PASS END=233121710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:13,0 chr1 233121711 . G . PASS END=233121715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 233121716 . A . PASS END=233121716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 233121717 . T . PASS END=233121717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 233121718 . A . PASS END=233121718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 233121719 . G . PASS END=233121762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:18,0 chr1 233121763 . G . PASS END=233121763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 233121764 . C . PASS END=233121778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 233121779 . G . PASS END=233121786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233121787 . G . PASS END=233121847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 233121848 . T . PASS END=233121848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 233121849 . G . PASS END=233121862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr1 233121863 . G . PASS END=233121863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr1 233121864 . C . PASS END=233121880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,737:0,57,255:19,0 chr1 233121881 . A . PASS END=233121888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr1 233121889 . G . PASS END=233121889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 233121890 . C . PASS END=233121896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr1 233121897 . A . PASS END=233121903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 233121904 . G . PASS END=233121906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 233121907 . G . PASS END=233121913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 233121914 . G . PASS END=233121915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 233121916 . A . PASS END=233121916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 233121917 . T . PASS END=233121918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 233121919 . G . PASS END=233121920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,2 chr1 233121921 . C . PASS END=233121924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 233121925 . C . PASS END=233121967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 233121968 . C . PASS END=233121968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr1 233121969 . T . PASS END=233121973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr1 233121974 . T . PASS END=233121979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233121980 . A . PASS END=233121982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr1 233121983 . A . PASS END=233121992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 233121993 . G . PASS END=233121993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 233121994 . G . PASS END=233122016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:26,0 chr1 233122017 . G . PASS END=233122020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 233122021 . G . PASS END=233122023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 233122024 . C . PASS END=233122054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr1 233122055 . C . PASS END=233122055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1013:0,71,255:26,0 chr1 233122056 . T . PASS END=233122057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 233122058 . A . PASS END=233122076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,925:0,78,255:26,0 chr1 233122077 . C . PASS END=233122077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:26,0 chr1 233122078 . G . PASS END=233122081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr1 233122082 . G . PASS END=233122082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:25,0 chr1 233122083 . G . PASS END=233122083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 233122084 . G . PASS END=233122094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,67,255:26,0 chr1 233122095 . G . PASS END=233122095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:25,0 chr1 233122096 . C . PASS END=233122097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 233122098 . G . PASS END=233122099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr1 233122100 . G . PASS END=233122101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr1 233122102 . C . PASS END=233122103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 233122104 . T . PASS END=233122108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 233122109 . G . PASS END=233122152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 233122153 . C . PASS END=233122237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,994:0,81,255:40,0 chr1 233122238 . C . PASS END=233122244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:33,0 chr1 233122245 . C . PASS END=233122248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 233122249 . G . PASS END=233122277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,868:0,64,255:30,0 chr1 233122278 . T . PASS END=233122278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr1 233122279 . C . PASS END=233122280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr1 233122281 . T . PASS END=233122281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 233122282 . C . PASS END=233122286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr1 233133997 . C . PASS END=233134001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr1 233134002 . C . PASS END=233134002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 233134003 . T . PASS END=233134006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 233134007 . T . PASS END=233134007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,829:0,41,255:23,0 chr1 233134008 . G . PASS END=233134016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr1 233134017 . C . PASS END=233134020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr1 233134021 . A . PASS END=233134021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 233134022 . T . PASS END=233134043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1027:0,87,255:30,0 chr1 233134044 . C . PASS END=233134044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 233134045 . C . PASS END=233134095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1095:0,80,255:35,0 chr1 233134096 . T . PASS END=233134096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 233134097 . G . PASS END=233134109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 233134110 . G . PASS END=233134116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,994:0,70,255:26,0 chr1 233134117 . C . PASS END=233134117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,776:0,34,255:25,0 chr1 233134118 . C . PASS END=233134123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,733:0,66,255:24,0 chr1 233134124 . T . PASS END=233134124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,858:0,45,255:21,0 chr1 233134125 . C . PASS END=233134132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,897:0,67,255:23,0 chr1 233134133 . G . PASS END=233134134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,715:0,42,255:19,0 chr1 233134135 . C . PASS END=233134137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 233134138 . C . PASS END=233134145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:41:22:0,41,745:0,41,255:19,0 chr1 233134146 . C . PASS END=233134150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 233134151 . A . PASS END=233134151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,751:0,14,255:21,0 chr1 233134152 . C . PASS END=233134165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,49,255:18,0 chr1 233134166 . A . PASS END=233134166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 233134167 . T . PASS END=233134168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 233134169 . G . PASS END=233134184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,32,255:13,0 chr1 233134851 . C . PASS END=233134860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,862:0,66,255:24,0 chr1 233134861 . T . PASS END=233134861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 233134862 . G . PASS END=233134862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 233134863 . G . PASS END=233134868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr1 233134869 . A . PASS END=233134869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr1 233134870 . A . PASS END=233134963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:28:0,80,1039:0,80,255:40,0 chr1 233134964 . A . PASS END=233134964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1503:0,77,255:38,0 chr1 233134965 . T . PASS END=233135076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:33:0,89,1233:0,89,255:40,0 chr1 233135077 . G . PASS END=233135077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:30,0 chr1 233135078 . C . PASS END=233135084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr1 233135085 . T . PASS END=233135110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:25:0,66,990:0,71,255:26,0 chr1 233135111 . G . PASS END=233135111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 233135112 . C . PASS END=233135114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 233135115 . T . PASS END=233135125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,55,255:19,0 chr1 233136051 . C . PASS END=233136058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 233136059 . C . PASS END=233136059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr1 233136060 . C . PASS END=233136060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 233136061 . T . PASS END=233136076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,560:0,51,255:17,0 chr1 233136077 . T . PASS END=233136077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,561:0,23,255:16,0 chr1 233136078 . T . PASS END=233136105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,627:0,40,255:19,0 chr1 233136106 . T . PASS END=233136109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 233136110 . C . PASS END=233136110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 233136111 . A . PASS END=233136113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 233136114 . C . PASS END=233136120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr1 233136121 . A . PASS END=233136123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233136124 . A . PASS END=233136127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,706:0,46,255:19,0 chr1 233136128 . G . PASS END=233136134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233136135 . G . PASS END=233136144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 233136145 . T . PASS END=233136145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 233136146 . C . PASS END=233136155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr1 233136156 . G . PASS END=233136157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 233136158 . A . PASS END=233136197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,676:0,49,255:19,0 chr1 233136198 . G . PASS END=233136201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr1 233136202 . A . PASS END=233136202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:20,0 chr1 233136203 . C . PASS END=233136210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 233136211 . T . PASS END=233136211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 233136212 . T . PASS END=233136216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233136217 . A . PASS END=233136218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 233136219 . G . PASS END=233136225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 233136226 . A . PASS END=233136226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:19,0 chr1 233136227 . T . PASS END=233136246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 233136247 . G . PASS END=233136281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:17:0,47,720:0,47,255:19,0 chr1 233137283 . C . PASS END=233137427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,101,1404:0,101,255:40,0 chr1 233150411 . C . PASS END=233150425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:24,0 chr1 233150426 . T . PASS END=233150426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 233150427 . G . PASS END=233150436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,961:0,72,255:25,0 chr1 233150437 . T . PASS END=233150443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 233150444 . G . PASS END=233150471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,879:0,67,255:26,0 chr1 233150472 . A . PASS END=233150472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr1 233150473 . G . PASS END=233150477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr1 233150478 . G . PASS END=233150478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 233150479 . A . PASS END=233150486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 233150487 . A . PASS END=233150487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,762:0,41,255:22,0 chr1 233150488 . G . PASS END=233150491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:22,0 chr1 233150492 . G . PASS END=233150493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 233150494 . G . PASS END=233150496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 233150497 . C . PASS END=233150518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,46,255:19,0 chr1 233150519 . G . PASS END=233150523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,549:0,32,255:13,0 chr1 233152667 . C . PASS END=233152677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr1 233152678 . T . PASS END=233152685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1096:0,90,255:30,0 chr1 233152686 . C . PASS END=233152687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:30,0 chr1 233152688 . G . PASS END=233152864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:87:35:0,87,1296:0,87,255:40,0 chr1 233152865 . G . PASS END=233152865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr1 233152866 . A . PASS END=233152878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,98,255:34,0 chr1 233152879 . T . PASS END=233152888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:31:0,63,945:0,93,255:26,0 chr1 233152889 . G . PASS END=233152889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:39:30:0,39,585:0,90,255:13,0 chr1 233152890 . T . PASS END=233152890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:30:0,42,630:0,90,255:14,0 chr1 233152891 . A . PASS END=233152900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:30:15:0,30,450:0,45,255:11,0 chr1 233160892 . C . PASS END=233160893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 233160894 . T . LowGQ END=233160894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,333:6,0,255:10,0 chr1 233160895 . G . PASS END=233160925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr1 233160926 . T . PASS END=233160929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 233160930 . A . PASS END=233160930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,464:0,28,255:14,0 chr1 233160931 . C . PASS END=233160941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr1 233160942 . T . PASS END=233160942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 233160943 . G . PASS END=233160969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,621:0,48,255:19,0 chr1 233160970 . G . PASS END=233161037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:25,0 chr1 233161038 . T . PASS END=233161038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr1 233161039 . G . PASS END=233161083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:26,0 chr1 233161084 . G . PASS END=233161084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 233161085 . C . PASS END=233161085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 233161086 . C . PASS END=233161086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr1 233161087 . T . PASS END=233161088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 233161089 . T . PASS END=233161091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,855:0,56,255:19,0 chr1 233161092 . C . PASS END=233161103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 233161104 . C . PASS END=233161104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 233161105 . C . PASS END=233161114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 233161115 . G . PASS END=233161120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 233161121 . A . PASS END=233161121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:16,0 chr1 233161122 . C . PASS END=233161134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr1 233161135 . G . PASS END=233161145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,38,255:13,0 chr1 233190014 . C . PASS END=233190026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,756:0,63,255:26,0 chr1 233190027 . T . PASS END=233190029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 233190030 . T . PASS END=233190030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr1 233190031 . C . PASS END=233190031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 233190032 . G . PASS END=233190032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 233190033 . A . PASS END=233190075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:29:0,82,1117:0,82,255:34,0 chr1 233190076 . A . PASS END=233190076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr1 233190077 . C . PASS END=233190078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 233190079 . A . PASS END=233190079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:33,0 chr1 233190080 . A . PASS END=233190083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1228:0,94,255:33,0 chr1 233190084 . A . PASS END=233190084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr1 233190085 . T . PASS END=233190087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1318:0,92,255:32,0 chr1 233190088 . A . PASS END=233190089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:72:37:0,72,1304:0,72,255:34,0 chr1 233190090 . G . PASS END=233190106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:35,0 chr1 233190107 . T . PASS END=233190107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr1 233190108 . A . PASS END=233190119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:34,0 chr1 233190120 . A . PASS END=233190120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1202:0,58,255:26,0 chr1 233190121 . G . PASS END=233190157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1172:0,81,255:34,0 chr1 233190158 . C . PASS END=233190158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:28,0 chr1 233190159 . A . PASS END=233190159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1160:0,71,255:28,0 chr1 233190160 . C . PASS END=233190164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:28,0 chr1 233190165 . G . PASS END=233190182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:27:0,66,990:0,71,255:26,0 chr1 233190183 . T . PASS END=233190183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:21,0 chr1 233190184 . G . PASS END=233190187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 233190188 . A . PASS END=233190188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:22,0 chr1 233190189 . G . PASS END=233190189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 233190190 . T . PASS END=233190190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:23,0 chr1 233190191 . G . PASS END=233190206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr1 233190207 . A . PASS END=233190207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 233190208 . T . PASS END=233190212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,823:0,69,255:23,0 chr1 233190213 . A . PASS END=233190213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:21,0 chr1 233190214 . T . PASS END=233190226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 233190227 . T . PASS END=233190229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 233192978 . C . PASS END=233193068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,157,255:40,0 chr1 233201389 . T . PASS END=233201407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:96:0,120,1800:0,245,255:40,0 chr1 233225807 . T . PASS END=233225811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:34:0,89,1247:0,89,255:33,0 chr1 233225812 . G . PASS END=233225812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:33,1 chr1 233225813 . T . PASS END=233225930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:35:0,88,1104:0,88,255:40,0 chr1 233225931 . C . PASS END=233225936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:34:0,75,1125:0,85,255:26,0 chr1 233231418 . T . PASS END=233231609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:50:0,120,1800:0,149,255:40,0 chr1 233248686 . T . PASS END=233248712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,120,1800:0,137,255:40,0 chr1 233270720 . T . PASS END=233270936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:46:0,111,1665:0,111,255:40,0 chr1 233275460 . T . PASS END=233275601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,105,1575:0,110,255:40,0 chr1 233296029 . C . PASS END=233296029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 233296030 . T . PASS END=233296030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:29:32:0,29,832:0,29,255:27,0 chr1 233296031 . C . PASS END=233296031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 233296032 . T . PASS END=233296032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:38:33:0,38,1072:0,38,255:30,0 chr1 233296033 . C . PASS END=233296038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1111:0,82,255:33,0 chr1 233296039 . C . PASS END=233296041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1286:0,89,255:34,0 chr1 233296042 . T . PASS END=233296042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1030:0,71,255:32,0 chr1 233296043 . T . PASS END=233296048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:36:0,80,1205:0,80,255:36,0 chr1 233296049 . T . PASS END=233296049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1197:0,64,255:35,0 chr1 233296050 . A . PASS END=233296051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1268:0,97,255:36,0 chr1 233296052 . T . PASS END=233296052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1246:0,75,255:36,0 chr1 233296053 . C . PASS END=233296063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:38:0,97,1299:0,97,255:39,0 chr1 233296064 . A . PASS END=233296065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1437:0,74,255:40,0 chr1 233296066 . A . PASS END=233296157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:32:0,87,1305:0,87,255:40,0 chr1 233296158 . A . PASS END=233296179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:21:0,60,900:0,61,255:25,0 chr1 233297017 . T . PASS END=233297109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:35:0,87,1305:0,88,255:40,0 chr1 233313548 . C . PASS END=233313644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,132,255:40,0 chr1 233314812 . A . PASS END=233314921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:32:0,87,1271:0,95,255:40,0 chr1 233334685 . C . PASS END=233334706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:26,0 chr1 233334707 . G . PASS END=233334715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr1 233334716 . A . PASS END=233334716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 233334717 . G . PASS END=233334771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1030:0,80,255:32,0 chr1 233334772 . C . PASS END=233334776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 233335900 . C . PASS END=233336010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1648:0,120,255:40,0 chr1 233344264 . C . PASS END=233344274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,921:0,65,255:28,0 chr1 233344275 . T . PASS END=233344281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1086:0,80,255:32,0 chr1 233344282 . C . PASS END=233344282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:31,0 chr1 233344283 . T . PASS END=233344400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1160:0,83,255:40,0 chr1 233344401 . A . PASS END=233344401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:32,0 chr1 233344402 . T . PASS END=233344413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:33,0 chr1 233344414 . A . PASS END=233344435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr1 233353645 . G . PASS END=233353677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,120,255:40,0 chr1 233353777 . C . PASS END=233353855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,113,1559:0,113,255:40,0 chr1 233353856 . A . PASS END=233353856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,4:62:76:62:0,76,2047:0,76,255:40,0 chr1 233353857 . A . PASS END=233353905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:83:49:0,83,1637:0,83,255:40,0 chr1 233353906 . T . PASS END=233353906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1759:0,67,255:39,0 chr1 233353907 . A . PASS END=233353907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:37:52:0,37,1643:0,37,255:38,0 chr1 233353908 . C . PASS END=233353908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:42:51:0,42,1615:0,42,255:37,0 chr1 233353909 . A . PASS END=233353910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:69:50:0,69,1568:0,69,255:36,0 chr1 233353911 . T . PASS END=233353912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:99:50:0,100,1653:0,100,255:37,0 chr1 233353913 . T . PASS END=233353913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:20:49:0,20,1534:0,20,255:32,0 chr1 233353914 . C . PASS END=233353914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:33:48:0,33,1496:0,33,255:32,0 chr1 233353915 . C . PASS END=233353916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:63:45:0,63,1354:0,63,255:33,0 chr1 233353917 . T . PASS END=233353917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:45:0,85,1534:0,85,255:32,0 chr1 233353918 . G . LowGQ END=233353918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:0:46:0,0,1288:50,0,255:30,0 chr1 233353919 . A . PASS END=233353920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:49:46:0,49,1406:0,49,255:30,0 chr1 233353921 . G . LowGQ END=233353921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:0:44:0,0,1255:4,0,255:19,0 chr1 233353922 . T . PASS END=233353922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:27:42:0,27,1184:0,27,255:19,0 chr1 233353923 . C . LowGQ END=233353923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,8:40:0:40:0,0,1020:57,0,255:19,0 chr1 233353924 . T . PASS END=233353925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1307:0,48,255:21,0 chr1 233353926 . C . PASS END=233353926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:39:40:0,39,1210:0,39,255:15,0 chr1 233353927 . A . PASS END=233353927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1174:0,45,255:16,0 chr1 233353928 . G . LowGQ END=233353928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,8:40:0:40:0,0,1042:49,0,255:12,0 chr1 233353929 . T . PASS END=233353930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:54:39:0,54,810:0,70,255:16,0 chr1 233362972 . C . PASS END=233363117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:49:0,102,1530:0,107,255:40,0 chr1 233372591 . C . PASS END=233372602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:26,0 chr1 233372603 . C . PASS END=233372701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1023:0,81,255:40,0 chr1 233372702 . A . PASS END=233372702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr1 233372703 . C . PASS END=233372722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,98,255:39,0 chr1 233372723 . C . PASS END=233372726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr1 233386485 . C . PASS END=233386578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,128,255:40,0 chr1 233388100 . C . PASS END=233388225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,106,1800:0,106,255:40,0 chr1 233388226 . T . PASS END=233388226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:62:52:0,62,1638:0,62,255:40,0 chr1 233388227 . T . PASS END=233388245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,105,1575:0,126,255:40,0 chr1 233388387 . A . PASS END=233388534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,102,1459:0,107,255:40,0 chr1 233393774 . C . PASS END=233393776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 233393777 . G . PASS END=233393777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 233393778 . G . PASS END=233393786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,854:0,72,255:26,0 chr1 233393787 . A . PASS END=233393808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1039:0,81,255:37,0 chr1 233393809 . G . PASS END=233393809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 233393810 . A . PASS END=233394031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,102,1377:0,114,255:40,0 chr1 233394032 . T . PASS END=233394032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1069:0,55,255:34,0 chr1 233394033 . C . PASS END=233394113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1211:0,96,255:39,0 chr1 233394114 . A . PASS END=233394116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 233394117 . T . PASS END=233394130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr1 233394131 . C . PASS END=233394131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 233394132 . C . PASS END=233394135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 233394136 . T . PASS END=233394136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 233394137 . C . PASS END=233394145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 233394146 . C . PASS END=233394165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 233394166 . T . PASS END=233394166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 233394167 . C . PASS END=233394206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr1 233394207 . A . PASS END=233394207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr1 233394208 . C . PASS END=233394239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,839:0,69,255:26,0 chr1 233394240 . C . PASS END=233394271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr1 233394272 . G . PASS END=233394274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 233394275 . A . PASS END=233394280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 233394281 . C . PASS END=233394281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 233394282 . A . PASS END=233394283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 233394284 . C . PASS END=233394284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 233394285 . T . PASS END=233394302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1048:0,87,255:30,0 chr1 233394303 . C . PASS END=233394303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 233394304 . A . PASS END=233394304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,962:0,35,255:23,0 chr1 233394305 . G . PASS END=233394364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,955:0,76,255:26,0 chr1 233394365 . G . PASS END=233394367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 233394368 . T . PASS END=233394378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:25,0 chr1 233394379 . G . PASS END=233394380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 233394381 . G . PASS END=233394381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:28,0 chr1 233394382 . T . PASS END=233394383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 233394384 . A . PASS END=233394385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 233394386 . A . PASS END=233394387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 233394388 . T . PASS END=233394388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:26,0 chr1 233394389 . T . PASS END=233394392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr1 233394393 . A . PASS END=233394395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 233394396 . G . PASS END=233394397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 233394398 . T . PASS END=233394400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 233394401 . T . PASS END=233394406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 233394407 . T . PASS END=233394408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 233394409 . C . PASS END=233394411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr1 233394412 . A . PASS END=233394412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,968:0,70,255:28,0 chr1 233394413 . C . PASS END=233394413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 233394414 . C . PASS END=233394414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 233394415 . A . PASS END=233394415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 233394416 . C . PASS END=233394459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,824:0,61,255:26,0 chr1 233394460 . G . PASS END=233394464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 233394465 . G . PASS END=233394489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr1 233394490 . G . PASS END=233394493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,986:0,45,255:25,0 chr1 233394494 . C . PASS END=233394517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1202:0,83,255:31,0 chr1 233394518 . G . PASS END=233394528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,964:0,70,255:26,0 chr1 233394529 . T . PASS END=233394570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1125:0,82,255:33,0 chr1 233394571 . T . PASS END=233394571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:28,0 chr1 233394572 . C . PASS END=233394594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:30,0 chr1 233394595 . T . PASS END=233394595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 233394596 . G . PASS END=233394612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 233394613 . T . PASS END=233394613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr1 233394614 . G . PASS END=233394633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1210:0,96,255:33,0 chr1 233394634 . T . PASS END=233394644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,83,255:26,0 chr1 233394645 . C . PASS END=233394654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 233394655 . A . PASS END=233394655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 233394656 . T . PASS END=233394658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 233394659 . T . PASS END=233394659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 233394660 . G . PASS END=233394676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 233394677 . T . PASS END=233394680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr1 233394681 . G . PASS END=233394687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 233394688 . C . PASS END=233394689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,76,255:25,0 chr1 233394690 . G . PASS END=233394693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 233394694 . T . PASS END=233394694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr1 233394695 . G . PASS END=233394697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 233394698 . G . PASS END=233394713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr1 233394714 . C . PASS END=233394715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:24,0 chr1 233394716 . G . PASS END=233394733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 233394734 . G . PASS END=233394749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:30,0 chr1 233394750 . T . PASS END=233394750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 233394751 . T . PASS END=233394839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1248:0,84,255:37,0 chr1 233394840 . C . PASS END=233394840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:32,0 chr1 233394841 . A . PASS END=233394894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1305:0,84,255:39,0 chr1 233394895 . G . PASS END=233394896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 233394897 . A . PASS END=233394899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 233394900 . C . PASS END=233394901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1070:0,74,255:26,0 chr1 233394902 . G . PASS END=233394902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 233394903 . C . PASS END=233394903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:26,0 chr1 233394904 . C . PASS END=233394906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 233394907 . T . PASS END=233394907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 233394908 . T . PASS END=233394909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 233394910 . C . PASS END=233394910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:28,0 chr1 233394911 . C . PASS END=233394911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,787:0,15,255:25,0 chr1 233394912 . T . PASS END=233394912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 233394913 . C . PASS END=233394917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:27,0 chr1 233394918 . T . PASS END=233394926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:33,0 chr1 233394927 . T . PASS END=233394927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1020:0,68,255:32,0 chr1 233394928 . T . PASS END=233394940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:33:0,94,1131:0,94,255:36,0 chr1 233394941 . G . PASS END=233394941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1341:0,65,255:34,0 chr1 233394942 . A . PASS END=233394961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:36:0,83,1133:0,83,255:36,0 chr1 233394962 . T . PASS END=233394962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:29,0 chr1 233394963 . T . PASS END=233395045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1211:0,88,255:38,0 chr1 233395046 . T . PASS END=233395046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1310:0,67,255:32,0 chr1 233395047 . A . PASS END=233395060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:36,0 chr1 233395061 . C . PASS END=233395070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:27:0,60,900:0,81,255:23,0 chr1 233395071 . G . PASS END=233395082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:19:0,51,765:0,53,255:18,0 chr1 233395083 . A . PASS END=233395083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 233395084 . A . PASS END=233395090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr1 233397031 . C . PASS END=233397067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:77:0,120,1800:0,201,255:40,2 chr1 233397791 . C . PASS END=233397794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1013:0,90,255:30,0 chr1 233397795 . G . PASS END=233397795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr1 233397796 . G . PASS END=233397802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1005:0,89,255:30,0 chr1 233397803 . A . PASS END=233397803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr1 233397804 . G . PASS END=233397812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1186:0,86,255:30,0 chr1 233397813 . G . PASS END=233397813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1172:0,58,255:30,0 chr1 233397814 . A . PASS END=233397822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:35:0,94,1258:0,94,255:36,0 chr1 233397823 . T . PASS END=233397823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1061:0,74,255:34,0 chr1 233397824 . T . PASS END=233397892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1028:0,80,255:38,0 chr1 233397893 . G . PASS END=233397893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 233397894 . T . PASS END=233397898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 233397899 . C . PASS END=233397911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,74,255:25,0 chr1 233398704 . C . PASS END=233398709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 233398710 . T . PASS END=233398710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr1 233398711 . T . PASS END=233398711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 233398712 . T . PASS END=233398712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 233398713 . C . PASS END=233398714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 233398715 . G . PASS END=233398715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr1 233398716 . T . PASS END=233398720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr1 233398721 . A . PASS END=233398876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1205:0,84,255:40,0 chr1 233398877 . G . PASS END=233398897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,71,255:26,0 chr1 233398898 . T . PASS END=233398909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr1 233430220 . T . PASS END=233430249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,193,255:40,0 chr1 233431072 . C . PASS END=233431165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1156:0,92,255:40,0 chr1 233431166 . C . PASS END=233431179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr1 233431180 . G . PASS END=233431208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,714:0,57,255:19,0 chr1 233431209 . G . PASS END=233431222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:12:0,33,495:0,36,255:12,0 chr1 233431223 . A . PASS END=233431223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 233431224 . T . PASS END=233431224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 233463775 . A . PASS END=233463795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr1 233463796 . G . LowGQ END=233463796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr1 233463797 . G . PASS END=233463801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr1 233463802 . A . PASS END=233463861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 233463862 . A . PASS END=233463862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 233463863 . C . PASS END=233463886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 233463887 . C . PASS END=233463888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 233463889 . G . PASS END=233463889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 233463890 . G . PASS END=233463893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr1 233463894 . G . PASS END=233463936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,202:6,0 chr1 233463937 . G . PASS END=233463944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 233463945 . G . PASS END=233463953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 233463954 . G . PASS END=233463954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr1 233463955 . C . PASS END=233463965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr1 233463966 . G . PASS END=233463971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 233463972 . G . PASS END=233463975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 233463976 . C . PASS END=233464004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr1 233464005 . C . PASS END=233464015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 233464016 . G . PASS END=233464024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr1 233464025 . A . PASS END=233464025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 233464026 . G . PASS END=233464029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 233464030 . C . PASS END=233464030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 233464031 . A . PASS END=233464031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 233464032 . G . PASS END=233464032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 233464033 . C . PASS END=233464037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 233464038 . C . PASS END=233464043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 233464044 . C . PASS END=233464044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 233464045 . A . PASS END=233464048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:11,0 chr1 233464049 . T . PASS END=233464049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr1 233464050 . C . PASS END=233464060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:12,0 chr1 233464061 . A . PASS END=233464061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:9,0 chr1 233464062 . C . PASS END=233464063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 233464064 . T . PASS END=233464064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 233464065 . G . PASS END=233464080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr1 233464081 . G . PASS END=233464094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr1 233464095 . G . PASS END=233464095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 233464096 . C . PASS END=233464114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr1 233464115 . G . PASS END=233464115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr1 233464116 . C . PASS END=233464117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 233464118 . C . PASS END=233464119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 233464120 . C . PASS END=233464120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 233464121 . C . PASS END=233464146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,588:0,46,255:19,0 chr1 233464147 . G . PASS END=233464177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:23,0 chr1 233464178 . T . PASS END=233464178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 233464179 . C . PASS END=233464203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 233464204 . C . PASS END=233464257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 233464258 . G . PASS END=233464260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 233464261 . G . PASS END=233464262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 233464263 . G . PASS END=233464267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 233464268 . C . PASS END=233464283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr1 233464284 . C . PASS END=233464284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 233464285 . G . PASS END=233464285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 233464286 . A . PASS END=233464311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 233464312 . C . PASS END=233464332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr1 233464333 . C . PASS END=233464333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr1 233464334 . G . PASS END=233464335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 233464336 . G . PASS END=233464366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 233464367 . T . LowDepth;LowGQ END=233464478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr1 233464479 . C . PASS END=233464487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr1 233464488 . C . PASS END=233464515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr1 233464516 . A G, 0.17 DRAGENSnpHardQUAL DP=6;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:5,1,0:0.167,0.000:6:3,1,0:2,0,0:14:21,0,50,36,179,215:21,0,168:5,0:1.6739e-01,1.4225e+01,6.7225e+01,4.9986e+01,2.2784e+02,2.3183e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,1,0:3,2,1,0 chr1 233464517 . T . PASS END=233464517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 233464518 . G . PASS END=233464553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 233464554 . G . PASS END=233464567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 233464568 . A . PASS END=233464579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 233482188 . T . PASS END=233482336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:94:36:0,94,1312:0,94,255:40,0 chr1 233482337 . T . PASS END=233482337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:30,0 chr1 233482338 . C . PASS END=233482342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:32,0 chr1 233482343 . T . PASS END=233482343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:31,0 chr1 233482344 . T . PASS END=233482364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1210:0,86,255:34,0 chr1 233482365 . G . PASS END=233482368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr1 233489553 . C . PASS END=233489701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:34:0,87,1203:0,102,255:40,0 chr1 233490582 . A . PASS END=233490692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:91:32:0,91,1142:0,91,255:40,0 chr1 233490693 . C . PASS END=233490693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:35,0 chr1 233490694 . C . PASS END=233490711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:33:0,87,1296:0,92,255:34,0 chr1 233490712 . A . PASS END=233490712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1049:0,44,255:29,0 chr1 233490713 . C . PASS END=233490726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:30,0 chr1 233490727 . A . PASS END=233490727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 233490728 . A . PASS END=233490728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 233490729 . T . PASS END=233490729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 233490730 . G . PASS END=233490736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1042:0,87,255:30,0 chr1 233490737 . G . PASS END=233490757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,74,255:26,0 chr1 233497799 . G . PASS END=233497805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:24,0 chr1 233497806 . G . PASS END=233497806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 233497807 . A . PASS END=233497834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,901:0,72,255:26,0 chr1 233497835 . G . PASS END=233497836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 233497837 . T . PASS END=233497837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 233497838 . C . PASS END=233497838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 233497839 . T . PASS END=233497842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 233497843 . G . PASS END=233497875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:33,0 chr1 233497876 . T . PASS END=233497876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 233497877 . G . PASS END=233498039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:33:0,96,1374:0,99,255:40,0 chr1 233507784 . A . PASS END=233507791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1244:0,102,255:38,0 chr1 233507792 . C . PASS END=233507792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:37,0 chr1 233507793 . A . PASS END=233507944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:38:0,107,1435:0,107,255:40,0 chr1 233511649 . A . PASS END=233511812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:65:0,120,1800:0,179,255:40,2 chr1 233512176 . G . PASS END=233512273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,163,255:40,0 chr1 233514677 . G . PASS END=233514852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:35:0,82,1266:0,82,255:40,0 chr1 233514853 . T . PASS END=233514853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:30,0 chr1 233514854 . C . PASS END=233514881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1177:0,80,255:33,0 chr1 233514882 . G . PASS END=233514882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr1 233514883 . A . PASS END=233514884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 233514885 . T . PASS END=233514890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 233514891 . C . PASS END=233514892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 233514893 . C . PASS END=233514897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 233514898 . A . PASS END=233514905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 233514906 . A . PASS END=233514906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:27,0 chr1 233514907 . A . PASS END=233514908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 233514909 . G . PASS END=233514910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 233514911 . A . PASS END=233514913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 233514914 . C . PASS END=233514955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,65,255:25,0 chr1 233514956 . T . PASS END=233514979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 233514980 . A . PASS END=233514982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233514983 . A . PASS END=233515007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,676:0,46,255:19,0 chr1 233515008 . G . PASS END=233515010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233515011 . C . PASS END=233515011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 233515012 . A . PASS END=233515013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233515014 . G . PASS END=233515014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 233515015 . G . PASS END=233515015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr1 233515016 . A . PASS END=233515026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 233515027 . A . PASS END=233515027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 233515028 . A . PASS END=233515030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 233515031 . G . PASS END=233515069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,520:0,43,255:19,0 chr1 233515070 . G . PASS END=233515091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,759:0,60,255:26,0 chr1 233515092 . G . PASS END=233515375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:80:29:0,80,1124:0,80,255:40,0 chr1 233515376 . G . PASS END=233515412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,154,255:40,0 chr1 233515413 . G A, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.771;ReadPosRankSum=2.995;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,35,0:0.556,0.000:63:13,16,0:15,19,0:48:85,0,49,1186,965,2151:255,0,255:26,0:5.0000e+01,7.0928e-05,5.1985e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,17,23,12:16,12,14,21 chr1 233515414 . T . PASS END=233515450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,147,255:40,0 chr1 233515451 . C . PASS END=233515470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,122,255:40,0 chr1 233518051 . C . PASS END=233518054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:22,0 chr1 233518055 . T . PASS END=233518055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 233518056 . G . PASS END=233518071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,823:0,66,255:26,0 chr1 233518072 . C . PASS END=233518072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 233518073 . C . PASS END=233518073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 233518074 . A . PASS END=233518292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:28:0,80,1019:0,80,255:40,0 chr1 233518293 . A . PASS END=233518293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1143:0,68,255:27,0 chr1 233518294 . C . PASS END=233518299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:28,0 chr1 233518300 . T . PASS END=233518300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:26,0 chr1 233518301 . C . PASS END=233518311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr1 233518312 . A . PASS END=233518312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:28,0 chr1 233518313 . G . PASS END=233518318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 233518319 . A . PASS END=233518319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:26,0 chr1 233518320 . A . PASS END=233518352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1170:0,86,255:35,0 chr1 233518353 . G . PASS END=233518353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:32,0 chr1 233518354 . A . PASS END=233518412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:34:0,88,1213:0,88,255:39,0 chr1 233518413 . A . PASS END=233518413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1062:0,55,255:32,0 chr1 233518414 . G . PASS END=233518432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1197:0,88,255:35,0 chr1 233518433 . A . PASS END=233518433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,939:0,46,255:28,0 chr1 233518434 . C . PASS END=233518434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 233518435 . T . PASS END=233518435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,919:0,59,255:29,0 chr1 233518436 . G . PASS END=233518436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:4:31:0,4,805:0,4,255:27,0 chr1 233518437 . G . PASS END=233518437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr1 233518438 . A . PASS END=233518445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1172:0,93,255:33,0 chr1 233518446 . T . PASS END=233518446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,891:0,52,255:30,0 chr1 233518447 . T . PASS END=233518457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,992:0,82,255:32,0 chr1 233749918 . A . PASS END=233749939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,505:0,45,255:19,0 chr1 233749940 . G . PASS END=233750010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr1 233750011 . C . PASS END=233750019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 233750020 . G . PASS END=233750025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 233750026 . G . PASS END=233750036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr1 233750037 . C . PASS END=233750044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 233750045 . C . PASS END=233750071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,590:0,48,255:19,0 chr1 233750072 . T . PASS END=233750072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 233750073 . G . PASS END=233750095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr1 233750096 . A . PASS END=233750096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr1 233750097 . G . PASS END=233750104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:18,0 chr1 233750105 . T . PASS END=233750108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 233750109 . G . PASS END=233750114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr1 233750115 . G . PASS END=233750137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,861:0,69,255:26,0 chr1 233750138 . A . PASS END=233750149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 233750150 . T . PASS END=233750150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 233750151 . C . PASS END=233750154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr1 233750155 . G . PASS END=233750155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 233750156 . G . PASS END=233750164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr1 233750165 . T . PASS END=233750165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 233750166 . G . PASS END=233750174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr1 233750175 . C . PASS END=233750175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 233750176 . A . PASS END=233750176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:26,0 chr1 233750177 . A . PASS END=233750182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 233750183 . G . PASS END=233750203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1119:0,84,255:30,0 chr1 233750204 . C . PASS END=233750204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 233750205 . C . PASS END=233750223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:31,0 chr1 233750224 . G . PASS END=233750225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 233750226 . C . PASS END=233750226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,801:0,37,255:24,0 chr1 233750227 . T . PASS END=233750243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 233750244 . C . PASS END=233750258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:18,0 chr1 233750259 . G . PASS END=233750272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:31:14:0,31,495:0,31,255:13,0 chr1 233766484 . A . PASS END=233766549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:70:0,120,1800:0,163,255:40,0 chr1 233767150 . G . PASS END=233767234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,156,255:40,0 chr1 233785687 . G . PASS END=233785715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:33:0,83,1241:0,83,255:40,0 chr1 233785716 . T G, 49.53 PASS DP=40;MQ=250.00;MQRankSum=5.369;ReadPosRankSum=4.826;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,18,0:0.450,0.000:40:9,5,0:13,13,0:47:84,0,47,184,184,184:255,0,255:22,0:4.9533e+01,9.1896e-05,5.0000e+01,1.8430e+02,2.1907e+02,1.8731e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,11,11,7:8,14,8,10 chr1 233785717 . A . PASS END=233785719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,122,255:40,0 chr1 233785720 . A . PASS END=233785720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1382:0,68,255:39,0 chr1 233785721 . G . PASS END=233785753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1442:0,107,255:40,0 chr1 233785754 . T . PASS END=233785767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:98:38:0,98,1341:0,98,255:38,0 chr1 233785768 . A . PASS END=233785768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1150:0,78,255:35,0 chr1 233785769 . G . PASS END=233785772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1410:0,98,255:37,0 chr1 233785773 . G . PASS END=233785773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr1 233785774 . A . PASS END=233785785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,84,255:37,0 chr1 233785786 . A . PASS END=233785795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:31:0,69,1035:0,93,255:24,0 chr1 233802341 . G . PASS END=233802344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr1 233802345 . T . PASS END=233802703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:31:0,86,1172:0,86,255:40,0 chr1 233802704 . A . PASS END=233802707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1296:0,62,255:36,0 chr1 233802708 . C . PASS END=233802708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 233802709 . A . PASS END=233802714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1291:0,75,255:36,0 chr1 233802715 . C . PASS END=233802715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 233802716 . T . PASS END=233802716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr1 233802717 . C . PASS END=233802718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1267:0,97,255:34,0 chr1 233802719 . A . PASS END=233802719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1288:0,67,255:33,0 chr1 233802720 . T . PASS END=233802727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1274:0,81,255:33,0 chr1 233802728 . G . PASS END=233802728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:28,0 chr1 233802729 . G . PASS END=233802733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:29,0 chr1 233802734 . C . PASS END=233802736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr1 233807017 . G . PASS END=233807026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr1 233807027 . A . PASS END=233807034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:30,0 chr1 233807035 . T . PASS END=233807036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1019:0,62,255:30,0 chr1 233807037 . A . PASS END=233807234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1141:0,87,255:40,0 chr1 233807235 . A . PASS END=233807256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,876:0,68,255:26,0 chr1 233807257 . A . PASS END=233807258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 233807259 . G . PASS END=233807267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 233807268 . A . PASS END=233807268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 233807269 . A . LowGQ END=233807269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,637:0,0,255:15,0 chr1 233807270 . C . PASS END=233807276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,53,255:16,0 chr1 234040824 . A . PASS END=234040837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,645:0,43,255:19,0 chr1 234040838 . G . PASS END=234040840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 234040841 . T . PASS END=234040841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 234040842 . C . PASS END=234040845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 234040846 . G . PASS END=234040876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:19,0 chr1 234041275 . T . PASS END=234041275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 234041276 . G . PASS END=234041277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 234041278 . C . PASS END=234041278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr1 234041279 . A . PASS END=234041289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr1 234041290 . A . PASS END=234041290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 234041291 . C . PASS END=234041293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 234041294 . G . PASS END=234041294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 234041295 . A . PASS END=234041303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 234041304 . C . PASS END=234041310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 234041311 . A . PASS END=234041311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:29,0 chr1 234041312 . C . PASS END=234041384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:31:0,83,1211:0,83,255:40,0 chr1 234041385 . A . PASS END=234041421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,102,1451:0,107,255:40,0 chr1 234041422 . G C, 167.39 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,21,0:0,19,0:117:205,120,0,1539,120,1539:255,120,0:0,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,18:0,0,17,23 chr1 234041423 . G . PASS END=234041442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,92,255:36,0 chr1 234041443 . G . PASS END=234041453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:28:0,75,1125:0,84,255:26,0 chr1 234041454 . T . PASS END=234041456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 234041457 . G . PASS END=234041457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 234041458 . C . PASS END=234041459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 234041460 . T . PASS END=234041474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr1 234041475 . G . PASS END=234041482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 234041483 . C . PASS END=234041501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 234041502 . A . PASS END=234041504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 234350245 . A . PASS END=234350272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr1 234350273 . C . PASS END=234350306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr1 234350307 . T . PASS END=234350320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,495:0,36,255:13,0 chr1 234367163 . G . PASS END=234367164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 234367165 . G . PASS END=234367169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 234367170 . G . PASS END=234367170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr1 234367171 . C . PASS END=234367185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 234367186 . C . PASS END=234367187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1054:0,76,255:29,0 chr1 234367188 . G . PASS END=234367328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1180:0,83,255:40,0 chr1 234367329 . G . PASS END=234367330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 234367331 . G . PASS END=234367350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr1 234367351 . C . PASS END=234367351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 234367352 . T . PASS END=234367360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 234367361 . G . PASS END=234367361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 234367362 . G . PASS END=234367362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 234367363 . A . PASS END=234367363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:27,0 chr1 234367364 . A . PASS END=234367368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 234367369 . G . PASS END=234367369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 234367370 . A . PASS END=234367373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:28,0 chr1 234367374 . G . PASS END=234367376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr1 234367377 . C . PASS END=234367380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 234367381 . A . PASS END=234367382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:31:0,61,1139:0,61,255:27,0 chr1 234367383 . C . PASS END=234367390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr1 234367391 . G . PASS END=234367391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 234367392 . G . PASS END=234367392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 234367393 . T . PASS END=234367393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,951:0,76,255:30,0 chr1 234367394 . T . PASS END=234367399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 234367400 . C . PASS END=234367400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 234367401 . C . PASS END=234367402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 234367403 . A . PASS END=234367403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr1 234367404 . C . PASS END=234367413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1105:0,93,255:31,0 chr1 234367414 . T . PASS END=234367415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 234367416 . A . PASS END=234367422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 234367423 . C . PASS END=234367427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 234367428 . G . PASS END=234367428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 234367429 . T . PASS END=234367429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 234367430 . A . PASS END=234367431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 234367432 . T . PASS END=234367432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:27,0 chr1 234367433 . A . PASS END=234367444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 234367445 . T . PASS END=234367445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 234367446 . C . PASS END=234367469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:29,0 chr1 234367470 . T . PASS END=234367483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,67,255:26,0 chr1 234367484 . A . PASS END=234367484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:20,0 chr1 234367485 . C . PASS END=234367487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr1 234444847 . G . PASS END=234444859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:43:0,80,1551:0,80,255:40,2 chr1 234444860 . T . PASS END=234444860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:52:46:0,52,1383:0,52,255:40,2 chr1 234444861 . T . PASS END=234445066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:39:0,86,1305:0,86,255:40,0 chr1 234452348 . A . PASS END=234452464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1180:0,85,255:40,0 chr1 234452465 . C . PASS END=234452473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,80,255:26,0 chr1 234454497 . G . PASS END=234454689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:83:31:0,83,1216:0,83,255:40,0 chr1 234455844 . C . PASS END=234455933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:54:0,120,1800:0,138,255:40,0 chr1 234458754 . T . PASS END=234458760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:26,0 chr1 234458761 . T . PASS END=234458804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1215:0,84,255:40,0 chr1 234458805 . C . PASS END=234458806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1374:0,63,255:40,0 chr1 234458807 . A . PASS END=234458936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:30:0,81,1172:0,83,255:40,0 chr1 234458937 . G . PASS END=234458980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:26,0 chr1 234458981 . G . PASS END=234458989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 234509213 . A . PASS END=234509227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,884:0,72,255:26,0 chr1 234509228 . G . PASS END=234509417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1087:0,80,255:40,0 chr1 234509418 . C . PASS END=234509418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 234509419 . A . PASS END=234509424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:30,0 chr1 234509465 . A . PASS END=234509478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1064:0,89,255:30,0 chr1 234509479 . T . PASS END=234509479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 234509480 . C . PASS END=234509482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:30,0 chr1 234509483 . T . PASS END=234509483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr1 234509484 . T . PASS END=234509496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 234509497 . C . PASS END=234509497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr1 234509498 . C . PASS END=234509499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 234509500 . C . PASS END=234509500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 234509501 . G . PASS END=234509501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:25,0 chr1 234509502 . G . PASS END=234509521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,953:0,65,255:26,0 chr1 234509522 . G . PASS END=234509522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr1 234509523 . G . PASS END=234509528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 234509529 . A . PASS END=234509529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 234509530 . C . PASS END=234509534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr1 234509535 . A . PASS END=234509564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,635:0,40,255:19,0 chr1 234509565 . C . PASS END=234509580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr1 234509581 . G . PASS END=234509581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 234509582 . C . PASS END=234509586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 234509976 . C . PASS END=234509977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 234509978 . T . PASS END=234509978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 234509979 . C . PASS END=234509985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr1 234509986 . G . PASS END=234509986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 234509987 . T . PASS END=234509987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 234509988 . A . PASS END=234509992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 234509993 . T . PASS END=234509993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 234509994 . G . PASS END=234510001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:19,0 chr1 234510002 . C . PASS END=234510015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr1 234510016 . A . PASS END=234510020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 234510021 . G . PASS END=234510021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,856:0,51,255:26,0 chr1 234510022 . G . PASS END=234510061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1025:0,87,255:37,0 chr1 234510062 . A . PASS END=234510062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1270:0,78,255:34,0 chr1 234510063 . T . PASS END=234510076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1292:0,92,255:34,0 chr1 234510077 . A . PASS END=234510077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:32,0 chr1 234510078 . T . PASS END=234510093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1219:0,86,255:34,0 chr1 234510094 . A . PASS END=234510094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,1034:0,54,255:29,0 chr1 234510095 . A . PASS END=234510105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:31,0 chr1 234510106 . T . PASS END=234510106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1025:0,63,255:28,0 chr1 234510107 . C . PASS END=234510111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 234510112 . G . PASS END=234510112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr1 234510113 . A . PASS END=234510119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1050:0,90,255:30,0 chr1 234510120 . T . PASS END=234510135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,73,255:26,0 chr1 234519469 . A . PASS END=234519564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:77:0,120,1800:0,192,255:40,0 chr1 234527323 . T . PASS END=234527330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 234527331 . T . PASS END=234527335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:24,0 chr1 234527336 . T . PASS END=234527336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr1 234527337 . C . PASS END=234527341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,884:0,72,255:26,0 chr1 234527342 . T . PASS END=234527443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,895:0,81,255:37,0 chr1 234527444 . A . PASS END=234527444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,743:0,32,255:27,0 chr1 234527445 . C . PASS END=234527463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1042:0,82,255:31,0 chr1 234527464 . A . PASS END=234527464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr1 234527465 . T . PASS END=234527467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 234527468 . G . PASS END=234527486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr1 234527487 . C . PASS END=234527488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 234527489 . T . PASS END=234527491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 234528162 . C . PASS END=234528298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:52:0,120,1800:0,137,255:40,0 chr1 234529108 . C . PASS END=234529109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 234529110 . C . PASS END=234529232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:29:0,87,1094:0,87,255:40,0 chr1 234529392 . C . PASS END=234529392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,703:0,63,255:21,0 chr1 234529393 . T . PASS END=234529393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 234529394 . C . PASS END=234529394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:21,0 chr1 234529395 . C . PASS END=234529398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 234529399 . A . PASS END=234529400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:20,0 chr1 234529401 . T . PASS END=234529404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,846:0,69,255:24,0 chr1 234529405 . C . PASS END=234529405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 234529406 . G . PASS END=234529418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,758:0,62,255:26,0 chr1 234529419 . G . PASS END=234529419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 234529420 . C . PASS END=234529424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 234529425 . C . PASS END=234529426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 234529427 . A . PASS END=234529427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,924:0,56,255:26,0 chr1 234529428 . C . PASS END=234529428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 234529429 . A . PASS END=234529429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:25,0 chr1 234529430 . A . PASS END=234529430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 234529431 . C . PASS END=234529431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,984:0,35,255:26,0 chr1 234529432 . G . PASS END=234529433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr1 234529434 . T . PASS END=234529435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:27,0 chr1 234529436 . A . PASS END=234529437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:30,0 chr1 234529438 . T . PASS END=234529438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:10:33:0,10,909:0,10,255:26,0 chr1 234529439 . C . PASS END=234529445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1050:0,90,255:30,0 chr1 234529446 . T . PASS END=234529446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr1 234529447 . T . PASS END=234529482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1056:0,82,255:31,0 chr1 234529483 . G . PASS END=234529483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 234529484 . A . PASS END=234529486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 234529487 . T . PASS END=234529487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1059:0,60,255:26,0 chr1 234529488 . C . PASS END=234529488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 234529489 . C . PASS END=234529489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 234529490 . A . PASS END=234529490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,861:0,23,255:22,0 chr1 234529491 . G . PASS END=234529493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr1 234529494 . C . PASS END=234529500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr1 234529501 . G . PASS END=234529501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 234529502 . G . PASS END=234529520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,950:0,84,255:30,0 chr1 234529521 . G . PASS END=234529521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 234529522 . G . PASS END=234529528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 234529529 . T . PASS END=234529529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 234529530 . T . PASS END=234529530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:28,0 chr1 234529531 . C . PASS END=234529536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 234529537 . A . PASS END=234529552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:24:0,60,900:0,71,255:26,0 chr1 234529553 . G . PASS END=234529564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:19:0,42,630:0,56,255:18,0 chr1 234529565 . G . PASS END=234529565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:15,0 chr1 234529566 . C . PASS END=234529583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,31,255:13,0 chr1 234534128 . C . PASS END=234534128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 234534129 . T . PASS END=234534129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:38,0 chr1 234534130 . A . PASS END=234534130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 234534131 . T . PASS END=234534131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1255:0,67,255:36,0 chr1 234534132 . G . PASS END=234534269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:35:0,87,1305:0,101,255:40,0 chr1 234534270 . T . PASS END=234534286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,68,255:25,0 chr1 234534287 . T . PASS END=234534292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 234534293 . A . PASS END=234534295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 234534296 . T . PASS END=234534299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr1 234536927 . C . PASS END=234537008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:49:0,114,1664:0,114,255:40,0 chr1 234541649 . C . PASS END=234541845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:32:0,85,1180:0,85,255:40,0 chr1 234546191 . C . PASS END=234546277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:66:0,120,1800:0,194,255:40,0 chr1 234546356 . C . PASS END=234546385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1107:0,90,255:36,0 chr1 234546386 . T . PASS END=234546388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 234546389 . C . PASS END=234546390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 234546391 . T . PASS END=234546412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 234546413 . G . PASS END=234546415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 234546416 . A . PASS END=234546416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:17,0 chr1 234546417 . A . PASS END=234546422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 234546423 . C . PASS END=234546426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 234546427 . G . PASS END=234546427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 234546428 . G . PASS END=234546432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 234546433 . A . PASS END=234546442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr1 234553830 . A . PASS END=234553979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,128,255:40,0 chr1 234556448 . C . PASS END=234556558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,92,255:40,0 chr1 234561419 . T . PASS END=234561539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,120,1800:0,128,255:40,0 chr1 234563063 . T . PASS END=234563097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,137,255:40,1 chr1 234563098 . A . PASS END=234563134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,157,255:40,0 chr1 234563322 . C . PASS END=234563508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:33:0,84,1205:0,88,255:40,0 chr1 234563509 . T . PASS END=234563509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1105:0,60,255:27,0 chr1 234563510 . A . PASS END=234563512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 234564882 . C . PASS END=234564883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 234564884 . C . PASS END=234564884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:36,0 chr1 234564885 . T . PASS END=234565028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:37:0,84,1331:0,84,255:40,0 chr1 234565029 . G . PASS END=234565070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:45:0,90,1350:0,100,255:40,0 chr1 234565162 . C . PASS END=234565369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:36:0,96,1398:0,108,255:40,1 chr1 234565370 . T . PASS END=234565370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1230:0,62,255:29,0 chr1 234565371 . A . PASS END=234565392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:32,0 chr1 234565393 . T . PASS END=234565393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1033:0,44,255:26,0 chr1 234565394 . C . PASS END=234565398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 234565399 . G . PASS END=234565410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1006:0,68,255:26,0 chr1 234565411 . T . PASS END=234565411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:23,0 chr1 234565412 . T . PASS END=234565422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,838:0,72,255:24,0 chr1 234565423 . A . PASS END=234565423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 234565833 . C . PASS END=234565839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:18,0 chr1 234565840 . A . PASS END=234565848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:21,0 chr1 234565849 . G . PASS END=234565849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 234565850 . G . PASS END=234565861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,792:0,62,255:26,0 chr1 234565862 . G . PASS END=234565863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 234565864 . T . PASS END=234565864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 234565865 . C . PASS END=234565867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr1 234565868 . C . PASS END=234565869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 234565870 . C . PASS END=234565870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 234565871 . C . PASS END=234565871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 234565872 . T . PASS END=234565993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1081:0,80,255:37,0 chr1 234565994 . G . PASS END=234566018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr1 234566019 . C . PASS END=234566047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:19,0 chr1 234569156 . C . PASS END=234569317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:42:0,99,1485:0,113,255:40,0 chr1 234573021 . A . PASS END=234573117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,149,255:40,0 chr1 234573118 . T . PASS END=234573118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr1 234582549 . C . PASS END=234582613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:82:31:0,82,1133:0,82,255:40,0 chr1 234582614 . C . PASS END=234582650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,138,255:40,0 chr1 234582651 . T C, 48.22 PASS DP=56;MQ=249.72;MQRankSum=5.290;ReadPosRankSum=4.214;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,24,0:0.429,0.000:56:19,14,0:13,10,0:47:83,0,50,850,1144,1994:255,0,255:27,0:4.8217e+01,8.7237e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,17,13,11:18,14,11,13 chr1 234582652 . A . PASS END=234582688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,117,1755:0,124,255:40,0 chr1 234582689 . A . PASS END=234582721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,94,255:40,0 chr1 234584226 . C . PASS END=234584230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:56:0,120,1800:0,167,255:40,0 chr1 234584231 . C T, 50.00 PASS DP=60;MQ=249.98;MQRankSum=6.211;ReadPosRankSum=3.165;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,33,0:0.550,0.000:60:16,17,0:11,16,0:48:85,0,49,1115,957,2072:255,0,255:27,0:5.0000e+01,6.9375e-05,5.2254e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,13,23,10:13,14,17,16 chr1 234584232 . T . PASS END=234584268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,179,255:40,0 chr1 234584269 . C . PASS END=234584325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,176,255:40,0 chr1 234586174 . T . PASS END=234586312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:42:0,102,1530:0,122,255:40,0 chr1 234593413 . C . PASS END=234593502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:82:32:0,82,1217:0,82,255:40,0 chr1 234594976 . C . PASS END=234594979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,108,1335:0,108,255:39,0 chr1 234594980 . T . PASS END=234594980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1213:0,61,255:37,0 chr1 234594981 . C . PASS END=234594984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,117,1474:0,117,255:40,0 chr1 234594985 . C . PASS END=234595072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:36:0,92,1300:0,92,255:40,0 chr1 234596007 . C . PASS END=234596007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 234596008 . T . PASS END=234596008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr1 234596009 . G . PASS END=234596133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1044:0,86,255:40,0 chr1 234596134 . G . PASS END=234596136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 234596137 . A . PASS END=234596142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:29,0 chr1 234599583 . T . PASS END=234599680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:34:0,96,1258:0,101,255:40,0 chr1 234601402 . C . PASS END=234601406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:84:0,120,1800:0,229,255:40,0 chr1 234601407 . A . PASS END=234601447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,3:99:99:93:0,108,1620:0,172,255:40,1 chr1 234601448 . T . PASS END=234601448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,13:93:49:93:0,49,2460:0,49,255:32,0 chr1 234601449 . A . PASS END=234601454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:89:0,105,1575:0,123,255:37,0 chr1 234603248 . C . PASS END=234603348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:54:0,120,1800:0,149,255:40,2 chr1 234603349 . T . PASS END=234603385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:62:0,120,1800:0,154,255:40,0 chr1 234603386 . G T, 49.97 PASS DP=61;MQ=250.00;MQRankSum=6.701;ReadPosRankSum=3.585;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,30,0:0.492,0.000:61:16,12,0:15,18,0:48:85,0,50,1067,1098,2165:255,0,255:24,0:4.9973e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,20,9,21:20,11,17,13 chr1 234603387 . A . PASS END=234603396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,146,255:40,0 chr1 234606934 . C . PASS END=234607003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:73:0,120,1800:0,199,255:40,0 chr1 234608460 . C . PASS END=234608557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:72:0,120,1800:0,183,255:40,0 chr1 234613919 . C . PASS END=234613940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 234613941 . G . PASS END=234613952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 234613953 . C . PASS END=234613964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 234613965 . C . PASS END=234613968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 234613969 . A . PASS END=234613972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 234613973 . C . PASS END=234613980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 234613981 . C . PASS END=234614021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr1 234614022 . C . PASS END=234614033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 234614034 . C . PASS END=234614047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:8,0 chr1 234614048 . T . PASS END=234614070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:5,0 chr1 234614071 . C T, 0.33 DRAGENSnpHardQUAL DP=5;MQ=250.00;MQRankSum=0.731;ReadPosRankSum=-0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:2,0,0:2,1,0:11:24,0,50,36,143,179:24,0,132:4,0:3.2847e-01,1.1377e+01,6.4377e+01,4.7137e+01,1.8925e+02,1.9324e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,0,1:2,2,1,0 chr1 234614072 . G . PASS END=234614102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr1 234614103 . G . LowGQ END=234614103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr1 234614104 . G . PASS END=234614108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 234614109 . G . PASS END=234614147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr1 234614148 . G . PASS END=234614164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 234614165 . T . PASS END=234614166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 234614167 . T . PASS END=234614175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 234614176 . C . PASS END=234614176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 234614177 . G . PASS END=234614230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 234614231 . G . LowGQ END=234614231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:7,0 chr1 234614232 . C . PASS END=234614249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:9,0 chr1 234614250 . G . PASS END=234614250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 234614251 . A . PASS END=234614251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 234614252 . C . PASS END=234614258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 234614259 . T . PASS END=234614259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr1 234614260 . G . PASS END=234614260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 234614261 . G . PASS END=234614261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr1 234614262 . C . PASS END=234614266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 234614267 . G . PASS END=234614286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,219:0,21,219:9,1 chr1 234614287 . G . LowGQ END=234614287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,314:5,0,255:9,1 chr1 234614288 . C . PASS END=234614289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr1 234614290 . G . PASS END=234614290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 234614291 . C . PASS END=234614291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 234614292 . G . PASS END=234614292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 234614293 . T . PASS END=234614320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr1 234614321 . C . PASS END=234614321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 234614322 . C . PASS END=234614327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 234614328 . C . PASS END=234614330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 234614331 . G . LowGQ END=234614331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:6,0 chr1 234614332 . C . PASS END=234614334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 234614335 . A . LowGQ END=234614335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,180:15,0,195:6,0 chr1 234614336 . G . PASS END=234614352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 234614353 . G . PASS END=234614367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 234614368 . T . PASS END=234614389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:1:3:0,1,94:0,1,94:3,0 chr1 234614390 . G C, 33.71 PASS DP=3;MQ=250.00;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,2,0:0.667,0.000:3:1,2,0:0,0,0:30:68,0,30,71,36,107:69,0,30:1,0:3.3709e+01,4.1557e-03,3.2752e+01,7.1489e+01,7.0542e+01,1.1026e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,0,2:1,0,0,2 chr1 234614391 . G . PASS END=234614427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:3:0,3,45:0,9,94:3,0 chr1 234614428 . A . LowDepth;LowGQ END=234614541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr1 234614542 . G . PASS END=234614549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 234614550 . C . PASS END=234614553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 234614554 . G . PASS END=234614586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr1 234614587 . A . PASS END=234614591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 234614592 . G . PASS END=234614610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,194:0,15,194:6,0 chr1 234614611 . G . PASS END=234614624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 234614625 . G . PASS END=234614678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr1 234614679 . G . LowGQ END=234614679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,371:16,0,255:9,0 chr1 234614680 . A . PASS END=234614712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 234614713 . T . PASS END=234614715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 234614716 . T . PASS END=234614724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 234614725 . C . PASS END=234614738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,319:0,27,255:9,0 chr1 234614739 . G . PASS END=234614742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 234614743 . A . PASS END=234614745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 234614746 . G . PASS END=234614746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 234614747 . T . PASS END=234614747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 234614748 . C . PASS END=234614751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 234614752 . A . PASS END=234614764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 234614765 . A . PASS END=234614772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 234614773 . C . PASS END=234614777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 234614778 . G . PASS END=234614780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:7,0 chr1 234614781 . C . PASS END=234614794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 234614795 . G . PASS END=234614800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 234614801 . G A, 0.08 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:3,1,0:3,0,0:17:18,0,50,36,215,250:18,0,212:6,0:8.4824e-02,1.7136e+01,7.0136e+01,5.2913e+01,2.6652e+02,2.7053e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,1,0:3,3,1,0 chr1 234614802 . G . PASS END=234614820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 234614821 . A . PASS END=234614821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:6,0 chr1 234614822 . G . PASS END=234614837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 234614838 . C . PASS END=234614849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr1 234742883 . T . PASS END=234742888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr1 234742889 . G . PASS END=234742895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr1 234742896 . T . PASS END=234742896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 234742897 . C . PASS END=234742919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,558:0,40,255:19,0 chr1 234742920 . G . PASS END=234742923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 234742924 . G . PASS END=234742924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr1 234742925 . G . PASS END=234742931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 234742932 . G . PASS END=234742944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 234742945 . G . PASS END=234742945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 234742946 . C . PASS END=234742946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 234742947 . A . PASS END=234742948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 234742949 . A . PASS END=234742949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 234742950 . A . PASS END=234742950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 234742951 . A . PASS END=234742954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,714:0,46,255:19,0 chr1 234742955 . C . PASS END=234742955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 234742956 . C . PASS END=234742968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:19:0,42,630:0,44,255:19,0 chr1 234742969 . A . PASS END=234742969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr1 234742970 . G . PASS END=234742989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:15,0 chr1 234742990 . C . PASS END=234742990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 234742991 . C . PASS END=234742995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr1 234742996 . T . PASS END=234742996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 234742997 . G . PASS END=234743001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,620:0,44,255:19,0 chr1 234743002 . A . PASS END=234743003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 234743004 . T . PASS END=234743005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 234743006 . G . PASS END=234743008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 234743009 . C . PASS END=234743012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 234743013 . C . PASS END=234743022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:21,0 chr1 234743023 . C . PASS END=234743023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 234743024 . C . PASS END=234743032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:24,0 chr1 234743033 . G . PASS END=234743033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 234743034 . A . PASS END=234743052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,833:0,72,255:24,0 chr1 234743053 . G . PASS END=234743053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 234743054 . G . PASS END=234743066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,900:0,61,255:25,0 chr1 234743067 . T . PASS END=234743067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:24,0 chr1 234743068 . G . PASS END=234743069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 234743070 . G . PASS END=234743070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr1 234743071 . A . PASS END=234743073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:28,0 chr1 234743074 . G . PASS END=234743078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 234743079 . G . PASS END=234743083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 234743084 . G . PASS END=234743084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 234743085 . C . PASS END=234743091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 234743092 . C . PASS END=234743095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,859:0,70,255:26,0 chr1 234743096 . A . PASS END=234743100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 234743101 . T . PASS END=234743119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:25:0,67,947:0,67,255:26,0 chr1 234743120 . G . PASS END=234743129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:28,0 chr1 234743130 . C . PASS END=234743156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 234743157 . G . PASS END=234743160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 234743161 . A . PASS END=234743171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1030:0,68,255:26,0 chr1 234743172 . C . PASS END=234743175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 234743176 . C . PASS END=234743176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr1 234743177 . A . PASS END=234743191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1000:0,78,255:26,0 chr1 234743192 . C . PASS END=234743192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 234743193 . A . PASS END=234743201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr1 234743202 . G . PASS END=234743229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:19,0 chr1 234743230 . C . PASS END=234743248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr1 234743249 . T . PASS END=234743250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 234743251 . G . PASS END=234743266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:22,0 chr1 234743267 . A . PASS END=234743275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 234743276 . A . PASS END=234743312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:24,0 chr1 234743313 . T . PASS END=234743313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr1 234743314 . T . PASS END=234743341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,886:0,62,255:24,0 chr1 234743342 . T . PASS END=234743342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 234743343 . G . PASS END=234743396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,837:0,62,255:26,0 chr1 234743397 . G . PASS END=234743397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 234743398 . C . PASS END=234743398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 234743399 . T . PASS END=234743401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr1 234743402 . A . PASS END=234743402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 234743403 . G . PASS END=234743404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr1 234743405 . C . PASS END=234743405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr1 234743406 . G . PASS END=234743422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:28,0 chr1 234743423 . A . PASS END=234743431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 234743432 . G . PASS END=234743433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 234743434 . C . PASS END=234743490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,862:0,62,255:26,0 chr1 234743491 . C . PASS END=234743500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 234743501 . T . PASS END=234743501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 234743502 . G . PASS END=234743502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 234743503 . T . PASS END=234743503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 234743504 . G . PASS END=234743507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 234743508 . A . PASS END=234743508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 234743509 . G . PASS END=234743529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr1 234743530 . T . PASS END=234743530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 234743531 . G . PASS END=234743544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1177:0,80,255:28,0 chr1 234743545 . C . PASS END=234743547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 234743548 . C . PASS END=234743548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr1 234743549 . T . PASS END=234743578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr1 234743579 . T . PASS END=234743580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 234743581 . T . PASS END=234743598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 234744193 . C . PASS END=234744212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:17,0 chr1 234744213 . C . PASS END=234744243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,673:0,41,255:18,0 chr1 234744244 . C . PASS END=234744244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 234744245 . A . PASS END=234744249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 234744250 . G A, 44.27 PASS DP=19;MQ=250.00;MQRankSum=3.377;ReadPosRankSum=1.272;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,6,0:0.316,0.000:19:6,2,0:7,4,0:44:79,0,50,215,465,680:175,0,255:12,0:4.4266e+01,1.8431e-04,5.3000e+01,2.1466e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,1,5:9,4,5,1 chr1 234744251 . G . PASS END=234744282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr1 234744283 . G . PASS END=234744287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 234744288 . G . PASS END=234744289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 234744290 . G . PASS END=234744320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,706:0,57,255:19,0 chr1 234744321 . T . PASS END=234744326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 234744327 . A . PASS END=234744328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr1 234744329 . G . PASS END=234744329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 234744330 . G . PASS END=234744361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 234744362 . A . PASS END=234744375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 234744376 . T . PASS END=234744412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 234744413 . C A, 80.11 PASS DP=11;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,10,0:0,1,0:30:118,33,0,427,33,427:255,33,0:0,0:8.0111e+01,3.0111e+01,4.2365e-03,4.2350e+02,6.4881e+01,4.2649e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,6:0,0,4,7 chr1 234744414 . G . PASS END=234744428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr1 234744429 . T . PASS END=234744450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr1 234744451 . G . PASS END=234744464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:8,0 chr1 234744465 . T . PASS END=234744485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,172:5,0 chr1 234744486 . C . PASS END=234744606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr1 234744607 . A . PASS END=234744622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr1 234744623 . G . LowGQ END=234744623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 234744624 . C . PASS END=234744657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:5,0 chr1 234744658 . A . LowGQ END=234744658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 234744659 . G . PASS END=234744674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,149:6,0 chr1 234744675 . A . PASS END=234744675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,178:0,4,178:5,0 chr1 234744676 . C . PASS END=234744677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr1 234744678 . A . PASS END=234744764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 234744765 . G . PASS END=234744770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr1 234744771 . A . PASS END=234744773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,243:5,0 chr1 234744774 . A . PASS END=234744774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:5,0 chr1 234744775 . T . PASS END=234744800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 234744801 . G . LowGQ END=234744801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr1 234744802 . T . PASS END=234744807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr1 234744808 . G A, 0.63 DRAGENSnpHardQUAL DP=4;MQ=250.00;MQRankSum=0.727;ReadPosRankSum=0.727;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:3,1,0:0.250,0.000:4:1,0,0:2,1,0:9:27,0,50,36,107,143:27,0,104:3,0:6.3376e-01,8.6728e+00,6.1673e+01,4.4433e+01,1.5074e+02,1.5473e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,1,0:1,2,0,1 chr1 234744809 . C . PASS END=234744810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 234744811 . G . PASS END=234744811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr1 234744812 . G . PASS END=234744819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr1 234744820 . T . LowGQ END=234744820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr1 234744821 . C . PASS END=234744845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr1 234744846 . T . PASS END=234744847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:5,0 chr1 234744848 . A . PASS END=234744848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,210:3,0 chr1 234744849 . G . PASS END=234744884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 234744885 . A . LowGQ END=234744971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,31:3,0 chr1 234744972 . T . PASS END=234745008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr1 234745009 . A G, 57.00 PASS DP=3;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:7:94,9,0,116,9,116:116,9,0:0,0:5.6997e+01,6.9969e+00,9.6768e-01,1.1430e+02,4.1767e+01,1.1730e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,1:0,0,0,3 chr1 234745010 . G . PASS END=234745021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 234745022 . G . PASS END=234745046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,141:0,12,141:6,0 chr1 234745047 . C . PASS END=234745058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 234745059 . C . PASS END=234745062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 234745063 . T . PASS END=234745063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 234745064 . G . PASS END=234745099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr1 234745100 . G . PASS END=234745110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:13,0 chr1 234745111 . C . PASS END=234745127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 234745128 . C . PASS END=234745135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 234745136 . G . PASS END=234745145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 234745146 . A . PASS END=234745147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 234745148 . G . PASS END=234745176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr1 234745177 . G . PASS END=234745198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr1 234745199 . C . PASS END=234745209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 234745210 . A . PASS END=234745213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 234745214 . G . PASS END=234745237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,310:0,24,255:9,0 chr1 234745238 . C . PASS END=234745240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 235275379 . T . PASS END=235275380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 235275381 . A . PASS END=235275423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:38:0,92,1285:0,92,255:40,0 chr1 235277083 . C . PASS END=235277200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:31:0,93,1135:0,93,255:40,0 chr1 235277201 . T . PASS END=235277225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 235283133 . C . PASS END=235283214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:33:0,92,1332:0,92,255:40,0 chr1 235285641 . C . PASS END=235285687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:39:0,101,1396:0,101,255:40,0 chr1 235291910 . G . PASS END=235291925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,570:0,43,255:19,0 chr1 235291926 . C . PASS END=235291954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 235291955 . G . PASS END=235291955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 235291956 . G . PASS END=235291961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,825:0,72,255:24,0 chr1 235291962 . G . PASS END=235291962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 235291963 . T . PASS END=235291982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:22,0 chr1 235291983 . A . PASS END=235291999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr1 235292000 . C . PASS END=235292028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr1 235292029 . A . PASS END=235292030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 235295028 . T . PASS END=235295312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:40:0,102,1413:0,102,255:40,0 chr1 235298967 . C . PASS END=235299085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,136,255:40,0 chr1 235299349 . T . PASS END=235299388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:99:0,120,1800:0,255,255:40,0 chr1 235301192 . A . PASS END=235301255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,100,1682:0,100,255:40,0 chr1 235301406 . C . PASS END=235301450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:55:0,120,1800:0,153,255:40,0 chr1 235301451 . T . PASS END=235301485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:49:0,90,1350:0,123,255:40,0 chr1 235301486 . A . PASS END=235301489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:72:49:0,72,1080:0,130,255:25,0 chr1 235311719 . T . PASS END=235311762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,154,255:40,0 chr1 235316000 . T . PASS END=235316051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:73:0,120,1800:0,183,255:40,0 chr1 235316052 . C . PASS END=235316080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,164,255:40,0 chr1 235318196 . C . PASS END=235318427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:33:0,83,1224:0,83,255:40,0 chr1 235319910 . C . PASS END=235319996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:50:0,120,1800:0,137,255:40,0 chr1 235323826 . C . PASS END=235323962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:40:0,104,1435:0,104,255:40,0 chr1 235324208 . T . PASS END=235324208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 235324209 . T . PASS END=235324229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:23,0 chr1 235324230 . G . PASS END=235324230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 235324231 . G . PASS END=235324236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 235324237 . T . PASS END=235324237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr1 235324238 . C . PASS END=235324259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,878:0,62,255:24,0 chr1 235324260 . A . PASS END=235324260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:22,0 chr1 235324261 . G . PASS END=235324271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,886:0,62,255:24,0 chr1 235324272 . C . PASS END=235324272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 235324273 . G . PASS END=235324282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,886:0,72,255:24,0 chr1 235324283 . A . PASS END=235324283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:19,0 chr1 235324284 . C . PASS END=235324284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 235324285 . C . PASS END=235324286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,855:0,56,255:19,0 chr1 235324287 . C . PASS END=235324293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 235324294 . G . PASS END=235324294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 235324295 . G . PASS END=235324302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 235324303 . C . PASS END=235324303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr1 235324304 . G . PASS END=235324306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 235324307 . A . PASS END=235324326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,653:0,43,255:19,0 chr1 235324327 . G . PASS END=235324329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 235324330 . C . PASS END=235324360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,675:0,44,255:19,0 chr1 235324361 . A . PASS END=235324361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr1 235324362 . A . PASS END=235324377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 235324378 . T . PASS END=235324379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 235324380 . T . PASS END=235324380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr1 235324381 . C . PASS END=235324382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr1 235324489 . C . PASS END=235324772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:38:0,81,1337:0,81,255:40,0 chr1 235331840 . T . PASS END=235331967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:39:0,96,1440:0,117,255:40,0 chr1 235335933 . T . PASS END=235336079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:37:0,85,1194:0,85,255:40,0 chr1 235338499 . A . PASS END=235338499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 235338500 . C . PASS END=235338501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 235338502 . T . PASS END=235338502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr1 235338503 . C . PASS END=235338512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr1 235338513 . C . PASS END=235338514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 235338515 . T . PASS END=235338517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 235338518 . G . PASS END=235338518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:21,0 chr1 235338519 . T . PASS END=235338530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 235338531 . A . PASS END=235338531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 235338532 . A . PASS END=235338533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 235338534 . C . PASS END=235338539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr1 235338540 . C . PASS END=235338540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr1 235338541 . T . PASS END=235338614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1086:0,85,255:35,0 chr1 235338615 . T . PASS END=235338615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1230:0,75,255:32,0 chr1 235338616 . T . PASS END=235338627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:34:0,89,1241:0,89,255:34,0 chr1 235338628 . A . PASS END=235338628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:31,0 chr1 235338629 . C . PASS END=235338656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:33,0 chr1 235338657 . G . PASS END=235338657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 235338658 . G . PASS END=235338663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 235338664 . T . PASS END=235338688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,61,255:25,0 chr1 235338689 . A . PASS END=235338696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:21:0,42,630:0,62,255:18,0 chr1 235338697 . C . PASS END=235338708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:18:0,33,495:0,41,255:13,0 chr1 235338709 . T . PASS END=235338709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,566:0,15,255:12,0 chr1 235338710 . A . PASS END=235338710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 235338711 . T . PASS END=235338711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,486:0,4,255:11,0 chr1 235338712 . T . PASS END=235338712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:13,0 chr1 235338713 . T . PASS END=235338713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 235338714 . G . PASS END=235338714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 235340205 . T . PASS END=235340218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:24,0 chr1 235341102 . A . PASS END=235341228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:69:0,120,1800:0,132,255:40,2 chr1 235344408 . T . PASS END=235344499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:31:0,81,1215:0,93,255:40,2 chr1 235344900 . C . PASS END=235344909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 235344910 . A . PASS END=235344920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr1 235344921 . C . PASS END=235344928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr1 235344929 . T . PASS END=235344954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,853:0,62,255:25,0 chr1 235344955 . A . PASS END=235345129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:29:0,80,1133:0,80,255:40,0 chr1 235345130 . A . PASS END=235345130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1338:0,78,255:31,0 chr1 235345131 . C . PASS END=235345319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1119:0,85,255:38,0 chr1 235345320 . C . PASS END=235345356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,99,1313:0,101,255:40,0 chr1 235345357 . G A, 49.82 PASS DP=40;MQ=249.75;MQRankSum=4.821;ReadPosRankSum=3.738;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:8,11,0:13,8,0:48:85,0,50,651,693,1344:255,0,255:20,0:4.9823e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,9,9,10:7,14,11,8 chr1 235345358 . G . PASS END=235345394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:38:0,97,1327:0,97,255:40,0 chr1 235345395 . A . PASS END=235346079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:94:41:0,94,1435:0,94,255:40,0 chr1 235346080 . C . PASS END=235346105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:34:0,90,1350:0,102,255:40,0 chr1 235346106 . A . PASS END=235346106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:28,0 chr1 235346107 . A . PASS END=235346108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:29,0 chr1 235357328 . C . PASS END=235357357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,779:0,62,255:26,0 chr1 235357358 . C . PASS END=235357358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 235357359 . T . PASS END=235357359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 235357360 . A . PASS END=235357526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,1215:0,84,255:40,1 chr1 235359346 . C . PASS END=235359430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:80:0,120,1800:0,202,255:40,0 chr1 235377084 . C . PASS END=235377085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 235377086 . C . PASS END=235377323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:81:28:0,81,1017:0,84,255:40,0 chr1 235377324 . T . PASS END=235377324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:79:56:0,79,1657:0,79,255:40,0 chr1 235377325 . C . PASS END=235377341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:49:0,93,1395:0,116,255:40,0 chr1 235383108 . C . PASS END=235383283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:42:0,105,1575:0,112,255:40,0 chr1 235383617 . C . PASS END=235383648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:45:0,86,1607:0,86,255:40,0 chr1 235383649 . T . PASS END=235383683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,160,255:40,0 chr1 235383684 . A . PASS END=235383684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,11:82:4:82:0,4,2046:0,4,255:40,0 chr1 235383685 . T . PASS END=235383685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr1 235383686 . A . LowGQ END=235383686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,16:83:0:83:0,0,1872:104,0,255:40,0 chr1 235383687 . T . PASS END=235383723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:85:0,120,1800:0,144,255:40,0 chr1 235383724 . T . PASS END=235383848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:34:0,81,1215:0,86,255:40,0 chr1 235383849 . C . PASS END=235383860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:25:0,68,992:0,68,255:25,0 chr1 235384880 . T . PASS END=235384977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:52:0,120,1800:0,140,255:40,0 chr1 235386481 . A . PASS END=235386575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:59:0,120,1800:0,161,255:40,0 chr1 235388018 . C . PASS END=235388090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:72:0,120,1800:0,196,255:40,0 chr1 235388810 . C . PASS END=235388827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,134,255:40,0 chr1 235392546 . T . PASS END=235392700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:90:45:0,90,1350:0,95,255:40,0 chr1 235394428 . C . PASS END=235394504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,116,1711:0,116,255:40,0 chr1 235397728 . A . PASS END=235397807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,190,255:40,0 chr1 235403628 . C . PASS END=235403766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:93:44:0,93,1395:0,120,255:40,0 chr1 235409735 . A . PASS END=235409826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,164,255:40,1 chr1 235416045 . T . PASS END=235416124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,102,1530:0,120,255:40,0 chr1 235418975 . C . PASS END=235419065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:46:0,120,1800:0,122,255:40,0 chr1 235420475 . C . PASS END=235420540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:63:0,120,1800:0,188,255:40,0 chr1 235423957 . C . PASS END=235424067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:34:0,90,1350:0,102,255:40,0 chr1 235437242 . T . PASS END=235437253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,199,255:40,0 chr1 235490229 . C . PASS END=235490234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,189,255:40,0 chr1 235498580 . A . PASS END=235498649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:85:0,120,1800:0,231,255:40,0 chr1 235505023 . G . PASS END=235505093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:63:0,120,1800:0,164,255:40,0 chr1 235505326 . A . PASS END=235505326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 235505327 . T . PASS END=235505328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 235505329 . A . PASS END=235505329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 235505330 . T . PASS END=235505337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1119:0,80,255:31,0 chr1 235505338 . G . PASS END=235505338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 235505339 . T . PASS END=235505560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:31:0,93,1105:0,93,255:40,0 chr1 235505561 . A . PASS END=235505561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:44:60:0,44,1756:0,44,255:40,0 chr1 235505562 . A . PASS END=235506087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,129,255:40,0 chr1 235506151 . C . PASS END=235506198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,249,255:40,0 chr1 235526329 . G . PASS END=235526344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr1 235526345 . G . PASS END=235526363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 235526364 . T . PASS END=235526364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 235526365 . C . PASS END=235526373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 235526374 . C . PASS END=235526380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 235526381 . T . PASS END=235526381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 235526382 . C . PASS END=235526398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 235526399 . C . PASS END=235526439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr1 235526440 . A . PASS END=235526443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:6:0,6,90:0,18,210:2,0 chr1 235530417 . T . PASS END=235530439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:88:47:0,88,1532:0,88,255:40,0 chr1 235530440 . T . PASS END=235530440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1688:0,78,255:40,0 chr1 235530441 . C . PASS END=235530443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,100,1567:0,100,255:40,0 chr1 235530444 . C . PASS END=235530444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1652:0,78,255:40,0 chr1 235530445 . T . PASS END=235530449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,119,1730:0,119,255:40,0 chr1 235530450 . G . PASS END=235530451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:95:50:0,95,1729:0,95,255:40,0 chr1 235530759 . C . PASS END=235530759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 235530783 . G . PASS END=235530783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 235543365 . A . PASS END=235543428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:54:0,120,1800:0,144,255:40,0 chr1 235543429 . C . PASS END=235543465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:77:0,120,1800:0,200,255:40,0 chr1 235543470 . C . PASS END=235543470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:77:0,120,1800:0,214,255:40,0 chr1 235543476 . TTGTGTGTGTGTGTGTGTGTG TTG,T, 48.47 PASS DP=71;MQ=247.92;MQRankSum=4.365;ReadPosRankSum=2.807;FractionInformativeReads=0.507;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,10,4,0:0.278,0.111,0.000:36:13,5,1,0:9,5,3,0:47:50,0,50,105,816,155,118,786,910,877:218,0,255:4,19:4.8473e+01,8.3354e-05,5.3000e+01,1.0465e+02,4.5000e+02,1.5765e+02,1.5099e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,2.00,5.00,2.00,4.00,5.00,34.77,36.77,36.77,37.77:7,15,6,8:8,14,8,6 chr1 235543479 . T . LowGQ END=235543479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,19:78:0:78:0,0,1607:255,0,255:5,18 chr1 235564818 . G . PASS END=235564902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1272:0,86,255:40,0 chr1 235577748 . G . PASS END=235577933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:29:0,81,1215:0,87,255:40,0 chr1 235582741 . A . PASS END=235582744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,105,1635:0,105,255:40,0 chr1 235582756 . A . PASS END=235582876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,152,255:40,0 chr1 235582890 . C . PASS END=235582890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,114,1710:0,138,255:38,0 chr1 235590455 . A . PASS END=235590554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,115,1529:0,115,255:40,0 chr1 235594020 . T . PASS END=235594119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:44:0,93,1584:0,93,255:40,0 chr1 235594125 . C . PASS END=235594125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:39,0 chr1 235596261 . G . PASS END=235596261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr1 235596262 . C . PASS END=235596262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 235596263 . T . PASS END=235596263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:25,0 chr1 235596264 . C . PASS END=235596264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 235596265 . A . PASS END=235596265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:26,0 chr1 235596266 . T . PASS END=235596267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1093:0,80,255:29,0 chr1 235596268 . C . PASS END=235596268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:28,0 chr1 235596269 . G . PASS END=235596270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 235596271 . A . PASS END=235596271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,917:0,32,255:27,0 chr1 235596272 . G . PASS END=235596281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:42:0,94,1596:0,94,255:40,0 chr1 235596282 . A . PASS END=235596486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:92:43:0,92,1587:0,92,255:40,0 chr1 235597519 . G . PASS END=235597525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1266:0,99,255:35,0 chr1 235597526 . G . PASS END=235597526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr1 235597527 . G . PASS END=235597568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1260:0,96,255:39,0 chr1 235597569 . G . PASS END=235597586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:25:0,75,939:0,75,255:26,0 chr1 235597587 . T . PASS END=235597587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 235597588 . T . PASS END=235597595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,931:0,75,255:25,0 chr1 235597606 . C . PASS END=235597606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 235597610 . C . PASS END=235597610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 235599048 . T . PASS END=235599048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 235599060 . G . PASS END=235599155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,137,255:40,0 chr1 235599163 . G . PASS END=235599163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 235599701 . G . PASS END=235599765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:74:0,120,1800:0,189,255:40,0 chr1 235599859 . G . PASS END=235599923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:44:0,91,1489:0,91,255:40,0 chr1 235599931 . C . PASS END=235599931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 235600637 . T . PASS END=235600643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:29,0 chr1 235600644 . T . PASS END=235600644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,999:0,71,255:28,0 chr1 235600645 . T . PASS END=235600649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr1 235600650 . A . PASS END=235600650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr1 235600651 . T . PASS END=235600774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1117:0,80,255:40,0 chr1 235600775 . C . PASS END=235600789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:28:0,60,900:0,74,255:26,0 chr1 235602084 . A . PASS END=235602088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:25,0 chr1 235602089 . C . PASS END=235602090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 235602091 . C . PASS END=235602095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 235602096 . G . PASS END=235602101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:31,0 chr1 235602102 . C . PASS END=235602102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:30,0 chr1 235602103 . G . PASS END=235602300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:32:0,91,1211:0,91,255:40,0 chr1 235602301 . T . PASS END=235602301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr1 235602302 . G . PASS END=235602303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr1 235604522 . T . PASS END=235604755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1050:0,80,255:40,0 chr1 235604756 . G . PASS END=235604759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 235604760 . A . PASS END=235604761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 235604762 . C . PASS END=235604769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1056:0,76,255:26,0 chr1 235604770 . G . PASS END=235604770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 235604771 . T . PASS END=235604779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr1 235604780 . G . PASS END=235604780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 235604781 . C . PASS END=235604782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr1 235604783 . G . PASS END=235604789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 235604790 . C . PASS END=235604810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,70,255:23,0 chr1 235604811 . C . PASS END=235604813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,59,255:18,0 chr1 235605129 . A . PASS END=235605197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:72:0,120,1800:0,209,255:40,0 chr1 235606167 . C . PASS END=235606271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,120,1800:0,133,255:40,0 chr1 235611664 . G . PASS END=235611820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:40:0,114,1710:0,120,255:40,0 chr1 235611821 . T . PASS END=235611821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:68:52:0,68,1634:0,68,255:38,0 chr1 235611822 . C . PASS END=235611827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:53:0,93,1697:0,93,255:40,0 chr1 235611985 . A . PASS END=235612077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,103,1800:0,103,255:40,0 chr1 235612094 . T . PASS END=235612094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr1 235612116 . G . PASS END=235612116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 235612134 . A . PASS END=235612134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr1 235612209 . A . PASS END=235612210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 235612254 . T . PASS END=235612254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 235612285 . G . PASS END=235612285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 235613521 . T . PASS END=235613650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:37:0,81,1215:0,94,255:40,0 chr1 235613651 . C . PASS END=235613655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,80,255:26,0 chr1 235614672 . T . PASS END=235614689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,122,255:40,0 chr1 235616399 . T . PASS END=235616399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 235616402 . C . PASS END=235616469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:51:0,120,1800:0,136,255:40,0 chr1 235617467 . C . PASS END=235617469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 235617470 . G . PASS END=235617470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 235617471 . A . PASS END=235617474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 235617475 . G . PASS END=235617506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1133:0,80,255:37,0 chr1 235617507 . C . PASS END=235617507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:37,0 chr1 235617508 . T . PASS END=235617606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:35:0,95,1293:0,95,255:40,0 chr1 235617607 . A . PASS END=235617607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:28,0 chr1 235617608 . C . PASS END=235617616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:30,0 chr1 235617617 . T . PASS END=235617627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 235618871 . T . PASS END=235618996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,111,1665:0,133,255:40,0 chr1 235620474 . C . PASS END=235620476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:26,0 chr1 235620477 . C . PASS END=235620480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 235620481 . A . PASS END=235620482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 235620483 . A . PASS END=235620483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,742:0,50,255:24,0 chr1 235620484 . C . PASS END=235620484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 235620485 . C . PASS END=235620502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:30:0,84,1164:0,85,255:35,0 chr1 235620503 . C . PASS END=235620503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:32,0 chr1 235620504 . T . PASS END=235620511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1335:0,108,255:36,0 chr1 235620512 . A . PASS END=235620512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:34,0 chr1 235620513 . G . PASS END=235620545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1209:0,86,255:36,0 chr1 235620546 . A . PASS END=235620546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 235620547 . C . PASS END=235620553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr1 235620554 . C . PASS END=235620559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:28:0,62,998:0,62,255:26,0 chr1 235621911 . C . PASS END=235622085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:82:33:0,82,1157:0,82,255:40,0 chr1 235622086 . C . PASS END=235622095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:25,0 chr1 235622097 . A . PASS END=235622097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr1 235628936 . T . PASS END=235628945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,138,255:40,0 chr1 235628946 . A . PASS END=235629032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:39:0,99,1485:0,111,255:40,0 chr1 235634163 . C . PASS END=235634168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1295:0,95,255:36,0 chr1 235634169 . T . PASS END=235634169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1238:0,62,255:33,0 chr1 235634170 . G . PASS END=235634255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,94,255:40,0 chr1 235634256 . C . PASS END=235634274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr1 235634276 . T . PASS END=235634276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 235643370 . C . PASS END=235643458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1150:0,91,255:40,0 chr1 235643459 . G . PASS END=235643465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:31:0,72,1080:0,93,255:26,0 chr1 235647633 . C . PASS END=235647633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 235647638 . C . PASS END=235647668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,143,255:40,0 chr1 235647669 . A . PASS END=235647818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:32:0,83,1224:0,83,255:40,0 chr1 235647819 . T . PASS END=235647819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr1 235647820 . C . PASS END=235647831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 235652473 . C . PASS END=235652475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,112,1792:0,112,255:40,0 chr1 235652476 . G . PASS END=235652512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,100,1655:0,100,255:40,0 chr1 235652513 . T C, 251.20 PASS DP=68;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,34,0:0,34,0:201:289,204,0,2607,204,2607:255,207,0:0,0:2.5120e+02,2.0120e+02,0.0000e+00,4.5000e+02,2.3597e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,38:0,0,34,34 chr1 235652514 . T . PASS END=235652550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,171,255:40,0 chr1 235652551 . C . PASS END=235652574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,136,255:40,0 chr1 235657991 . C . PASS END=235657992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 235657993 . T . PASS END=235658016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,648:0,60,255:26,0 chr1 235658017 . C . PASS END=235658044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,936:0,81,255:35,0 chr1 235658045 . A . PASS END=235658045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:33,0 chr1 235658046 . C . PASS END=235658079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1183:0,95,255:38,0 chr1 235658080 . C . PASS END=235658080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr1 235658081 . A . PASS END=235658105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,93,255:38,0 chr1 235658106 . T . PASS END=235658127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,61,255:26,0 chr1 235658128 . G . PASS END=235658128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 235658129 . G . PASS END=235658130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr1 235658131 . C . PASS END=235658131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:20,0 chr1 235658132 . A . PASS END=235658138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:21,0 chr1 235667441 . C . PASS END=235667443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 235667444 . C . PASS END=235667444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 235667445 . A . PASS END=235667491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 235667492 . G . PASS END=235667552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:18,0 chr1 235715409 . T . PASS END=235715537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:47:0,92,1670:0,92,255:40,0 chr1 235747040 . C . PASS END=235747138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,108,1672:0,108,255:40,0 chr1 235824379 . G . PASS END=235824379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr1 235824409 . T . PASS END=235824409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:76:0,120,1800:0,195,255:40,0 chr1 235824448 . T . PASS END=235824448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 235824707 . C . PASS END=235824707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 235824802 . G . PASS END=235824802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 235824812 . A . PASS END=235824812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1269:0,42,255:30,0 chr1 235824861 . C . PASS END=235824861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1520:0,120,255:40,0 chr1 235824884 . C . PASS END=235824884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 235824945 . A . PASS END=235824945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr1 235825029 . C . PASS END=235825029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 235825278 . C . PASS END=235825278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1187:0,99,255:33,0 chr1 235825319 . G . PASS END=235825319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1518:0,107,255:37,0 chr1 235825333 . C . PASS END=235825333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 235825349 . C . PASS END=235825349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1568:0,93,255:40,0 chr1 235825367 . C . PASS END=235825367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,117,1755:0,125,255:38,0 chr1 235825409 . T . PASS END=235825409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,102,1530:0,104,255:33,0 chr1 235825416 . T . PASS END=235825416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 235825431 . T . PASS END=235825431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 235825528 . A . PASS END=235825528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 235825546 . A . PASS END=235825546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 235825721 . G . PASS END=235825721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 235825911 . T . PASS END=235825911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 235825921 . G . PASS END=235825921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr1 235825965 . T . PASS END=235825965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 235825993 . C . PASS END=235825994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:35,0 chr1 235826049 . A . PASS END=235826049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 235826146 . T . PASS END=235826146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr1 235826235 . C . PASS END=235826235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 235826240 . T . PASS END=235826332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:91:43:0,91,1515:0,91,255:40,0 chr1 235826333 . A . PASS END=235826340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:42:0,93,1395:0,98,255:34,0 chr1 235826341 . C . PASS END=235826343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:66:42:0,66,990:0,93,255:22,0 chr1 235826344 . T . PASS END=235826360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:42:30:0,42,630:0,46,255:18,0 chr1 235826361 . T . PASS END=235826361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:39:30:0,39,585:0,73,255:12,0 chr1 235826362 . C . PASS END=235826367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:42:29:0,42,630:0,43,255:14,0 chr1 235826368 . A . PASS END=235826370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:30:27:0,30,450:0,64,255:13,0 chr1 235826371 . A . PASS END=235826378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:21:27:0,21,315:0,34,255:9,0 chr1 235826382 . TA T, 45.35 PASS DP=22;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=0.181;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,13,0:0.619,0.000:21:6,10,0:2,3,0:19:55,0,16,74,47,121:255,0,255:5,17:4.5352e+01,5.8214e-02,1.8766e+01,9.9281e+01,8.1507e+01,1.4897e+02:0.00,10.00,13.00,34.77,44.77,37.77:1,7,4,9:3,5,5,8 chr1 235827284 . C . PASS END=235827355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,108,1620:0,162,255:40,0 chr1 235827370 . A . PASS END=235827370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 235827765 . C . PASS END=235827776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 235827777 . T . PASS END=235827777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr1 235827778 . T . PASS END=235827781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1040:0,87,255:30,0 chr1 235827782 . T . PASS END=235827782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:29,0 chr1 235827783 . A . PASS END=235827888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:30:0,80,1071:0,80,255:40,0 chr1 235827889 . C . PASS END=235827889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 235827890 . C . PASS END=235827890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:25,0 chr1 235827891 . G . PASS END=235827907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:24:0,62,930:0,62,255:26,0 chr1 235827908 . A . PASS END=235827908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:22,0 chr1 235827909 . C . PASS END=235827910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 235827911 . G . PASS END=235827912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,860:0,44,255:22,0 chr1 235827913 . C . PASS END=235827920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 235827921 . G . PASS END=235827921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:21,0 chr1 235840380 . A . PASS END=235840380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 235840391 . C . PASS END=235840488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,143,255:40,0 chr1 235840495 . G . PASS END=235840495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 235840769 . T . PASS END=235840769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr1 235840780 . C . PASS END=235840919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:42:0,110,1512:0,110,255:40,0 chr1 235850245 . C . PASS END=235850245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 235850249 . C . PASS END=235850249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1271:0,99,255:33,0 chr1 235850250 . G . PASS END=235850250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 235850251 . T . PASS END=235850347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:30:0,83,1194:0,83,255:40,0 chr1 235856650 . C . PASS END=235856782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:35:0,93,1395:0,105,255:40,0 chr1 235856783 . A . PASS END=235856783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:30,0 chr1 235856784 . C . PASS END=235856786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 235860383 . C . PASS END=235860390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr1 235860391 . T . PASS END=235860430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1031:0,81,255:34,0 chr1 235860431 . C . PASS END=235860431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:32,0 chr1 235860432 . A . PASS END=235860553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr1 235860554 . T . PASS END=235860572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:24:0,72,864:0,72,255:26,0 chr1 235866047 . C . PASS END=235866069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,831:0,69,255:24,0 chr1 235866070 . G . PASS END=235866126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1115:0,94,255:39,0 chr1 235866127 . C . PASS END=235866127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1125:0,61,255:34,0 chr1 235866128 . T . PASS END=235866238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:37:0,94,1304:0,94,255:40,0 chr1 235866239 . T . PASS END=235866240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:33,0 chr1 235866241 . G . PASS END=235866256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:31,0 chr1 235866257 . G . PASS END=235866277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,900:0,72,255:25,0 chr1 235872391 . A . PASS END=235872398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:32,0 chr1 235872399 . G . PASS END=235872399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 235872400 . A . PASS END=235872608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:30:0,80,1139:0,80,255:40,0 chr1 235875348 . T . PASS END=235875348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 235875357 . C . PASS END=235875357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:32,0 chr1 235875358 . T . PASS END=235875362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1279:0,89,255:36,0 chr1 235875363 . G . PASS END=235875363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:35,0 chr1 235875364 . G . PASS END=235875497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:36:0,91,1258:0,91,255:40,0 chr1 235875501 . T . PASS END=235875501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 235876466 . C . PASS END=235876476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,193,255:40,1 chr1 235878501 . C . PASS END=235878657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:98:38:0,98,1357:0,98,255:40,0 chr1 235878659 . T . PASS END=235878659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 235878672 . G . PASS END=235878672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 235880012 . C . PASS END=235880078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:66:0,120,1800:0,184,255:40,0 chr1 235883961 . C . PASS END=235884187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:34:0,81,1215:0,90,255:40,0 chr1 235884188 . G . PASS END=235884202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:21:0,60,900:0,62,255:25,0 chr1 235884203 . A . PASS END=235884203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:17,0 chr1 235884204 . A . PASS END=235884205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,670:0,49,255:19,0 chr1 235887328 . C . PASS END=235887474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:34:0,81,1215:0,82,255:40,0 chr1 235887475 . A . PASS END=235887480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,84,255:26,0 chr1 235891361 . T . PASS END=235891361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:75:0,120,1800:0,209,255:40,0 chr1 235891373 . C . PASS END=235891373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr1 235891376 . C . PASS END=235891431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:82:0,120,1800:0,199,255:40,0 chr1 235892896 . C . PASS END=235892957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,130,255:40,0 chr1 235892970 . A . PASS END=235892970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 235894147 . C . PASS END=235894243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,171,255:40,0 chr1 235894332 . C . PASS END=235894477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:33:0,90,1350:0,98,255:40,0 chr1 235894479 . T . PASS END=235894479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 235896788 . C . PASS END=235896788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 235896803 . C . PASS END=235896991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:80:32:0,80,1169:0,80,255:40,0 chr1 235897130 . C . PASS END=235897206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,1:119:99:98:0,120,1800:0,255,255:40,0 chr1 235897776 . G . PASS END=235897776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 235897783 . C . PASS END=235897783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 235897784 . T . PASS END=235897784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1637:0,72,255:40,0 chr1 235897785 . C . PASS END=235897953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:32:0,80,1215:0,80,255:40,0 chr1 235897954 . T . PASS END=235897958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 235897959 . G . PASS END=235897959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 235903851 . T . PASS END=235903961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:50:0,117,1782:0,117,255:40,0 chr1 235904722 . T . PASS END=235904726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 235904727 . G . PASS END=235904727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 235904728 . G . PASS END=235904729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr1 235904730 . A . PASS END=235904916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:30:0,81,1215:0,90,255:40,0 chr1 235904917 . T . PASS END=235904919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 235904920 . A . PASS END=235904920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:24,0 chr1 235904921 . C . PASS END=235904928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,990:0,68,255:25,0 chr1 235904936 . C . PASS END=235904936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 235907279 . A . PASS END=235907457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:36:0,102,1530:0,108,255:40,0 chr1 235907462 . G . PASS END=235907462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1371:0,95,255:35,0 chr1 235909636 . C . PASS END=235909644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:29,0 chr1 235909645 . T . PASS END=235909645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr1 235909646 . A . PASS END=235909652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:29:0,83,1194:0,83,255:35,0 chr1 235909653 . T . PASS END=235909653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:31,0 chr1 235909654 . T . PASS END=235909827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:35:0,99,1485:0,105,255:40,2 chr1 235910470 . C . PASS END=235910504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,117,1476:0,120,255:40,0 chr1 235910505 . G . PASS END=235910541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,158,255:40,0 chr1 235910542 . C T, 46.35 PASS DP=61;MQ=250.00;MQRankSum=6.548;ReadPosRankSum=3.580;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,24,0:0.393,0.000:61:18,16,0:19,8,0:45:81,0,50,850,1250,2100:255,0,255:35,0:4.6350e+01,1.2244e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,16,16,8:20,17,10,14 chr1 235910543 . G . PASS END=235910579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,152,255:40,0 chr1 235910580 . A . PASS END=235910631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:40:0,96,1440:0,104,255:40,0 chr1 235914508 . G . PASS END=235914508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 235914510 . C . PASS END=235914517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:34,0 chr1 235914518 . C . PASS END=235914518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1260:0,72,255:34,0 chr1 235914519 . T . PASS END=235914678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:36:0,104,1180:0,104,255:40,0 chr1 235915299 . T . PASS END=235915299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr1 235915305 . T . PASS END=235915308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr1 235915309 . T . PASS END=235915309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 235915310 . G . PASS END=235915311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 235915312 . C . PASS END=235915312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 235915313 . C . PASS END=235915321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 235915322 . T . PASS END=235915326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr1 235915327 . A . PASS END=235915327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr1 235915328 . T . PASS END=235915329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 235915330 . T . PASS END=235915331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr1 235915332 . G . PASS END=235915336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr1 235915337 . T . PASS END=235915337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr1 235915338 . A . PASS END=235915470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:34:0,99,1227:0,102,255:40,0 chr1 235915471 . G . PASS END=235915471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:32,0 chr1 235916344 . T . PASS END=235916347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,919:0,78,255:26,0 chr1 235916348 . T . PASS END=235916349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 235916350 . T . PASS END=235916350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr1 235916351 . C . PASS END=235916351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 235916352 . T . PASS END=235916352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr1 235916353 . A . PASS END=235916354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr1 235916355 . T . PASS END=235916355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 235916356 . C . PASS END=235916574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:28:0,84,1003:0,84,255:40,0 chr1 235918778 . T . PASS END=235918947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:44:0,99,1485:0,115,255:40,0 chr1 235920581 . T . PASS END=235920748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:81:34:0,81,1215:0,85,255:40,0 chr1 235920749 . T . PASS END=235920755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:31:0,63,945:0,89,255:26,0 chr1 235920756 . A . PASS END=235920758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:30:0,54,855:0,54,255:20,0 chr1 235922272 . C . PASS END=235922292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,931:0,64,255:26,0 chr1 235922293 . T . PASS END=235922295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 235922296 . T . PASS END=235922296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr1 235922297 . A . PASS END=235922389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1031:0,83,255:35,0 chr1 235922390 . C . PASS END=235922390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:29,0 chr1 235922391 . G . PASS END=235922422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1164:0,83,255:33,0 chr1 235922423 . C . PASS END=235922423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr1 235922424 . A . PASS END=235922425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 235922426 . T . PASS END=235922426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 235922427 . A . PASS END=235922707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1258:0,85,255:40,0 chr1 235922708 . A . PASS END=235922708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1223:0,50,255:34,0 chr1 235922709 . A . PASS END=235922871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:37:0,84,1350:0,84,255:40,0 chr1 235922872 . T . PASS END=235922872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:30,0 chr1 235922873 . G . PASS END=235922879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 235922880 . A . PASS END=235922884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 235922885 . T . PASS END=235922890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr1 235922891 . A . PASS END=235922891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr1 235922892 . A . PASS END=235922893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 235922894 . T . PASS END=235922894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 235922895 . C . PASS END=235922895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 235922896 . T . PASS END=235922896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,934:0,56,255:26,0 chr1 235922897 . C . PASS END=235922899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 235926020 . C . PASS END=235926020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 235926021 . T . PASS END=235926022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 235926023 . C . PASS END=235926023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 235926024 . A . PASS END=235926025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 235926026 . A . PASS END=235926026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,857:0,70,255:26,0 chr1 235926027 . T . PASS END=235926032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 235926033 . A . PASS END=235926033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr1 235926034 . G . PASS END=235926035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 235926036 . A . PASS END=235926036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 235926037 . G . PASS END=235926130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1174:0,93,255:40,0 chr1 235926131 . T . PASS END=235926133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr1 235926134 . C . PASS END=235926134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 235926135 . C . PASS END=235926135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1101:0,57,255:25,0 chr1 235926136 . T . PASS END=235926151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr1 235929379 . C . PASS END=235929558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:42:0,81,1215:0,120,255:40,0 chr1 235929559 . G . PASS END=235929560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:42:0,69,1035:0,126,255:24,0 chr1 235929561 . T . PASS END=235929561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:24,0 chr1 235929562 . G . PASS END=235929565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,990:0,62,255:24,0 chr1 235929566 . C . PASS END=235929568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,60,255:19,0 chr1 235929569 . T . PASS END=235929577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:28:0,63,948:0,63,255:26,0 chr1 235933460 . C . PASS END=235933597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:96:45:0,96,1590:0,96,255:40,0 chr1 235937140 . G . PASS END=235937140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr1 235937142 . C . PASS END=235937283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:32:0,87,1180:0,87,255:40,0 chr1 235937284 . A . PASS END=235937284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1348:0,63,255:33,0 chr1 235937285 . G . PASS END=235937291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:42:0,96,1440:0,99,255:36,0 chr1 235937295 . T . PASS END=235937295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:40:0,84,1260:0,104,255:28,0 chr1 235938202 . T . PASS END=235938202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 235938213 . C . PASS END=235938343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:59:0,120,1800:0,150,255:40,0 chr1 235938344 . G . PASS END=235938386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:37:0,87,1305:0,104,255:40,0 chr1 235938388 . T . LowGQ END=235938388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,876:116,0,255:29,7 chr1 235938400 . T . PASS END=235938400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1318:0,59,255:33,0 chr1 235940363 . C . PASS END=235940364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1266:0,94,255:36,0 chr1 235940365 . T . PASS END=235940365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr1 235940366 . G . PASS END=235940412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:94:37:0,94,1236:0,94,255:40,0 chr1 235940413 . T . PASS END=235940449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,123,255:40,0 chr1 235940450 . C T, 50.00 PASS DP=65;MQ=250.00;MQRankSum=6.902;ReadPosRankSum=4.139;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,35,0:0.538,0.000:65:17,24,0:13,11,0:48:85,0,50,1223,1058,2280:255,0,255:27,0:5.0000e+01,6.7822e-05,5.2518e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,12,12,23:15,15,21,14 chr1 235940451 . T . PASS END=235940487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,157,255:40,0 chr1 235940488 . C . PASS END=235940573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:39:0,81,1215:0,117,255:40,0 chr1 235940574 . G . PASS END=235940585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:25:0,63,945:0,75,255:24,0 chr1 235940586 . G . PASS END=235940588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 235940589 . T . PASS END=235940593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 235940594 . A . PASS END=235940595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr1 235940596 . C . PASS END=235940596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,690:0,32,255:17,0 chr1 235940597 . T . PASS END=235940603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:18,0 chr1 235940604 . C . PASS END=235940608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr1 235944165 . A . PASS END=235944321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:81:48:0,81,1215:0,109,255:40,0 chr1 235944322 . A . PASS END=235944355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr1 235945227 . C . PASS END=235945256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:52:0,120,1800:0,140,255:40,0 chr1 235945257 . A . PASS END=235945293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,116,1683:0,116,255:40,0 chr1 235945294 . T C, 49.99 PASS DP=65;MQ=250.00;MQRankSum=6.922;ReadPosRankSum=4.284;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,32,0:0.492,0.000:65:18,21,0:15,11,0:48:85,0,50,1136,1143,2280:255,0,255:32,0:4.9992e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,15,19,13:19,14,16,16 chr1 235945295 . A . PASS END=235945331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:66:0,120,1800:0,178,255:40,0 chr1 235945332 . C . PASS END=235945387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:39:0,96,1440:0,114,255:40,0 chr1 235945391 . C . PASS END=235945391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 235950498 . A . PASS END=235950498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr1 235950500 . C . PASS END=235950673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:31:0,91,1062:0,91,255:40,0 chr1 235951995 . C . PASS END=235951995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 235952000 . C . PASS END=235952145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:89:31:0,89,1244:0,89,255:40,0 chr1 235954999 . C . PASS END=235955112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:52:0,120,1800:0,140,255:40,0 chr1 235955113 . G . PASS END=235955149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:48:0,95,1624:0,95,255:40,0 chr1 235955150 . G A, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=3.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,26,0:0.542,0.000:48:11,14,0:11,12,0:48:85,0,50,783,750,1533:255,0,255:20,0:5.0000e+01,6.7563e-05,5.2559e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,12,14:16,6,10,16 chr1 235955151 . T . PASS END=235955187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,105,1686:0,105,255:40,0 chr1 235955188 . G . PASS END=235955393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:39:0,111,1665:0,117,255:40,0 chr1 235955394 . A . PASS END=235955394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1357:0,70,255:35,0 chr1 235955395 . T . PASS END=235955424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1305:0,92,255:39,0 chr1 235955425 . T . PASS END=235955425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,953:0,68,255:29,0 chr1 235956803 . T . PASS END=235956912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:51:0,120,1800:0,130,255:40,0 chr1 235963612 . C . PASS END=235963612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,218,255:40,0 chr1 235963620 . C . PASS END=235963686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:80:0,120,1800:0,210,255:40,0 chr1 235964171 . C . PASS END=235964392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:36:0,84,1305:0,84,255:40,0 chr1 235964393 . T . PASS END=235964397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,83,255:25,0 chr1 235966196 . A . PASS END=235966196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 235966208 . C . PASS END=235966364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:35:0,102,1465:0,105,255:40,0 chr1 235967804 . C . PASS END=235967923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,105,1575:0,128,255:40,0 chr1 235967924 . A . PASS END=235967924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1302:0,74,255:33,0 chr1 235967925 . T . PASS END=235967960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,83,255:39,0 chr1 235967961 . A . PASS END=235967965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:25,0 chr1 235967979 . A . PASS END=235967979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 235969043 . C . PASS END=235969054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:26,0 chr1 235969055 . C . PASS END=235969603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:83:32:0,83,1178:0,83,255:40,0 chr1 235969604 . T . PASS END=235969604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1303:0,65,255:33,0 chr1 235969605 . A . PASS END=235969660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:38,0 chr1 235969661 . A . PASS END=235969669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr1 235969670 . G . PASS END=235969670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 235969671 . T . PASS END=235969671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 235969672 . C . PASS END=235969673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 235969674 . T . PASS END=235969675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 235969676 . G . PASS END=235970072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:32:0,82,1113:0,82,255:40,0 chr1 235971379 . C . PASS END=235971404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:96:0,120,1800:0,239,255:40,0 chr1 235971744 . C . PASS END=235971744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 235971751 . A . PASS END=235971751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 235971755 . C . PASS END=235971762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,789:0,61,255:26,0 chr1 235971763 . A G,T, 50.00 PASS DP=28;MQ=250.00;FractionInformativeReads=0.929 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,16,0,0:0.615,0.000,0.000:26:4,8,0,0:6,8,0,0:46:85,0,44,472,424,505,605,605,605,605:255,0,255:10,0:5.0000e+01,1.2115e-04,4.7467e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78,34.77,69.54,69.54,37.78:2,8,6,10:6,4,10,6 chr1 235971764 . A . PASS END=235971765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,856:0,61,255:26,0 chr1 235971766 . C . PASS END=235971766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 235971767 . A . PASS END=235971767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,880:0,64,255:26,0 chr1 235971768 . G . PASS END=235971769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1075:0,96,255:32,0 chr1 235971770 . A . PASS END=235971770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,928:0,40,255:30,0 chr1 235971771 . T . PASS END=235971772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1075:0,80,255:32,0 chr1 235971773 . G . PASS END=235971773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1035:0,66,255:31,0 chr1 235971774 . G . PASS END=235971777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1125:0,82,255:33,0 chr1 235971778 . A . PASS END=235971778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1053:0,49,255:29,0 chr1 235971779 . G . PASS END=235971787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:34:0,88,1071:0,88,255:33,0 chr1 235971788 . T . PASS END=235971788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr1 235971789 . A . PASS END=235971792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1205:0,88,255:34,0 chr1 235971793 . C . PASS END=235971793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:14:34:0,14,1014:0,14,255:30,0 chr1 235971794 . T . PASS END=235971800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1166:0,85,255:36,0 chr1 235971801 . C . PASS END=235971805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:36:0,101,1259:0,101,255:38,0 chr1 235971806 . T . PASS END=235971806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:36,0 chr1 235971807 . G . PASS END=235971842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:39:0,87,1343:0,87,255:40,0 chr1 235971843 . T . PASS END=235971843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1454:0,79,255:40,0 chr1 235971844 . T . PASS END=235972098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:86:42:0,86,1530:0,86,255:40,0 chr1 235972099 . T . PASS END=235972099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1481:0,79,255:38,0 chr1 235972100 . C . PASS END=235972397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:42:0,93,1419:0,93,255:40,0 chr1 235972398 . G . PASS END=235972434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,108,1620:0,129,255:40,0 chr1 235972435 . T C, 49.97 PASS DP=45;MQ=249.51;MQRankSum=5.211;ReadPosRankSum=3.326;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:8,13,0:15,9,0:48:85,0,50,786,784,1571:255,0,255:20,0:4.9974e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,8,14:13,10,7,15 chr1 235972436 . A . PASS END=235972472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,108,1567:0,113,255:40,0 chr1 235972473 . A . PASS END=235972829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:39:0,80,1172:0,80,255:40,0 chr1 235972830 . T . PASS END=235972866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:95:44:0,95,1582:0,95,255:40,0 chr1 235972867 . T C, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.600;ReadPosRankSum=1.421;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,22,0:0.512,0.000:43:6,11,0:15,11,0:48:85,0,50,777,743,1520:255,0,255:19,0:5.0000e+01,6.5492e-05,5.2953e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,8,14:11,10,11,11 chr1 235972868 . T . PASS END=235972904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1288:0,92,255:38,0 chr1 235972905 . A . PASS END=235973440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1239:0,84,255:40,0 chr1 235973441 . T . PASS END=235973441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1307:0,67,255:35,0 chr1 235973442 . C . PASS END=235973442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1520:0,110,255:37,0 chr1 235973443 . T . PASS END=235973443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1435:0,79,255:36,0 chr1 235973444 . C . PASS END=235973834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:38:0,85,1192:0,85,255:40,0 chr1 235976271 . C . PASS END=235976361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,99,1525:0,99,255:40,0 chr1 235976364 . A . PASS END=235976364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:35,0 chr1 235993526 . C . PASS END=235993538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:26,0 chr1 235993539 . G . PASS END=235993694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,942:0,81,255:40,0 chr1 235993695 . A . PASS END=235993697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 235993698 . G . PASS END=235993707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,900:0,81,255:26,0 chr1 235993708 . C . PASS END=235993709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 235993710 . G . PASS END=235993717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:33:21:0,33,495:0,63,255:13,0 chr1 235993722 . G . PASS END=235993722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr1 235996971 . C . PASS END=235996971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,7:102:62:102:0,62,3368:0,62,255:40,10 chr1 235996976 . A . PASS END=235996976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:102:0,120,1800:0,255,255:40,0 chr1 236030176 . C . LowDepth END=236030176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr1 236030179 . C . PASS END=236030179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 236030181 . C . PASS END=236030181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 236030184 . C . PASS END=236030185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 236030187 . G . PASS END=236030187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr1 236141167 . T . PASS END=236141167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr1 236141168 . C . PASS END=236141168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 236141169 . A . PASS END=236141169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 236141170 . T . PASS END=236141170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 236141171 . T . PASS END=236141172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:30,0 chr1 236141173 . C . PASS END=236141173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 236141174 . T . PASS END=236141255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:31:0,92,1059:0,92,255:40,0 chr1 236141256 . A . PASS END=236141256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:34,0 chr1 236141257 . G . PASS END=236141288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1202:0,83,255:34,0 chr1 236142295 . C . PASS END=236142295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 236142296 . T . PASS END=236142300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr1 236142301 . G . PASS END=236142302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 236142303 . C . PASS END=236142303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 236142304 . A . PASS END=236142304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:27,0 chr1 236142305 . C . PASS END=236142305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 236142306 . T . PASS END=236142306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 236142307 . G . PASS END=236142373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:31:0,87,1234:0,87,255:40,0 chr1 236142374 . G . PASS END=236142407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:38:0,83,1343:0,83,255:40,0 chr1 236143122 . A . PASS END=236143132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:30,0 chr1 236143133 . T . PASS END=236143133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:26,0 chr1 236143134 . G . PASS END=236143215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1147:0,80,255:35,0 chr1 236143216 . T . PASS END=236143225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,77,255:26,0 chr1 236143226 . G . PASS END=236143226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:23,0 chr1 236143227 . C . PASS END=236143232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:24,0 chr1 236143233 . G . PASS END=236143233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:23,0 chr1 236143234 . C . PASS END=236143236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 236143237 . G . PASS END=236143237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 236143238 . A . PASS END=236143243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 236143244 . G . PASS END=236143244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 236143245 . C . PASS END=236143245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 236143795 . C . PASS END=236143929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:31:0,87,1140:0,93,255:40,0 chr1 236143930 . T . PASS END=236143930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 236143931 . T . PASS END=236143936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr1 236143937 . C . PASS END=236143942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:30:0,62,1035:0,62,255:23,1 chr1 236143943 . A . PASS END=236143943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:22,0 chr1 236143944 . G . PASS END=236143953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,65,255:23,0 chr1 236144911 . C . PASS END=236144932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:19,0 chr1 236144933 . T . PASS END=236144933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 236144934 . G . PASS END=236144934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 236144935 . C . PASS END=236144954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:23,0 chr1 236144955 . A . PASS END=236144955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 236144956 . G . PASS END=236144976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,864:0,62,255:24,0 chr1 236144977 . T . PASS END=236144977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 236144978 . G . PASS END=236145033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,868:0,61,255:26,0 chr1 236145034 . A . PASS END=236145037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 236145038 . T . PASS END=236145069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 236145070 . G . PASS END=236145082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 236148679 . C . PASS END=236148681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr1 236148682 . G . PASS END=236148785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1194:0,83,255:40,0 chr1 236148786 . A . PASS END=236148788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 236148789 . C . PASS END=236148795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 236148796 . T . PASS END=236148805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 236154186 . C . PASS END=236154187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 236154188 . G . PASS END=236154188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:19,0 chr1 236154189 . G . PASS END=236154189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 236154190 . A . PASS END=236154190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 236154191 . C . PASS END=236154194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr1 236154195 . A . PASS END=236154195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 236154196 . A . PASS END=236154213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,868:0,61,255:26,0 chr1 236154214 . G . PASS END=236154214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 236154215 . T . PASS END=236154216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr1 236154217 . T . PASS END=236154277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1047:0,81,255:36,0 chr1 236154278 . A . PASS END=236154278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:34,0 chr1 236154279 . A . PASS END=236154313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,95,255:35,0 chr1 236154314 . G . PASS END=236154314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 236154315 . C . PASS END=236154327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:29,0 chr1 236154328 . T . PASS END=236154348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr1 236154349 . G . PASS END=236154358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:21:0,54,810:0,63,255:19,0 chr1 236156945 . A . PASS END=236156945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 236156946 . C . PASS END=236156955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,615:0,43,255:19,0 chr1 236156956 . A . PASS END=236156960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 236156961 . G . PASS END=236156961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 236156962 . G . PASS END=236156967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr1 236156968 . G . PASS END=236156976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr1 236156977 . C . PASS END=236156979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 236156980 . T . PASS END=236156980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 236156981 . C . PASS END=236156991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr1 236156992 . C . PASS END=236156992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 236156993 . C . PASS END=236157036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,861:0,66,255:25,0 chr1 236157037 . T . PASS END=236157037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr1 236157038 . G . PASS END=236157067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:24,0 chr1 236157068 . A . PASS END=236157068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:21,0 chr1 236157069 . C . PASS END=236157083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 236157084 . C . PASS END=236157084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 236157085 . C . PASS END=236157088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:21,0 chr1 236157089 . G . PASS END=236157148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,629:0,40,255:19,0 chr1 236157149 . G . PASS END=236157149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 236157150 . C . PASS END=236157151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 236157152 . G . PASS END=236157169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 236157170 . C . PASS END=236157170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 236157171 . C . PASS END=236157172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr1 236175221 . C . PASS END=236175301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:85:40:0,85,1457:0,85,255:40,0 chr1 236175302 . A . PASS END=236175338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,119,1673:0,119,255:40,0 chr1 236175339 . T C, 182.42 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,25,0:0,20,0:132:220,135,0,320,320,320:255,135,0:0,0:1.8242e+02,1.3242e+02,0.0000e+00,3.1719e+02,3.5196e+02,3.2020e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,27:0,0,20,25 chr1 236175340 . A . PASS END=236175343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,114,1710:0,116,255:40,0 chr1 236176711 . C . PASS END=236176712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,939:0,64,255:26,0 chr1 236176713 . T . PASS END=236176724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:28,0 chr1 236176725 . C . PASS END=236176725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr1 236176726 . C . PASS END=236176734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr1 236176735 . A . PASS END=236176735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 236176736 . A . PASS END=236176745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr1 236176746 . A . PASS END=236176746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr1 236176747 . A . PASS END=236176750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr1 236176751 . G . PASS END=236176751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 236176752 . G . PASS END=236176752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 236176753 . A . PASS END=236176753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 236176754 . A . PASS END=236176755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 236176756 . A . PASS END=236176756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr1 236176757 . G . PASS END=236176847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1251:0,86,255:40,0 chr1 236176848 . T . PASS END=236176860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,75,255:25,0 chr1 236180448 . C . PASS END=236180453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:32,0 chr1 236180454 . A . PASS END=236180454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr1 236180455 . C . PASS END=236180540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1208:0,83,255:40,0 chr1 236180541 . A . PASS END=236180545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1485:0,111,255:33,0 chr1 236180546 . G . PASS END=236180556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,99,255:25,0 chr1 236180557 . T . PASS END=236180557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:20,0 chr1 236180558 . G . PASS END=236180573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,59,255:19,0 chr1 236187370 . C . PASS END=236187380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr1 236187381 . C . PASS END=236187381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 236187382 . G . PASS END=236187402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr1 236187403 . T . PASS END=236187423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:19,0 chr1 236187424 . G . PASS END=236187434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:21,0 chr1 236187435 . C . PASS END=236187435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 236187436 . C . PASS END=236187438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 236187439 . G . PASS END=236187445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 236187446 . G . PASS END=236187458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 236187459 . T . PASS END=236187460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,706:0,46,255:19,0 chr1 236187461 . A . PASS END=236187465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 236187466 . C . PASS END=236187488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr1 236187489 . T . PASS END=236187490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 236187491 . C . PASS END=236187493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr1 236187494 . A . PASS END=236187513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 236189196 . C . PASS END=236189196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 236189197 . C . PASS END=236189203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 236189204 . G . PASS END=236189204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr1 236189205 . G . PASS END=236189207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 236189208 . C . PASS END=236189225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:34,0 chr1 236189226 . C . PASS END=236189226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:32,0 chr1 236189227 . A . PASS END=236189360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1168:0,85,255:40,0 chr1 236189361 . A . PASS END=236189362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1125:0,89,255:26,0 chr1 236189363 . G . PASS END=236189376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:29,0 chr1 236189377 . A . PASS END=236189377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,954:0,57,255:26,0 chr1 236189378 . G . PASS END=236189385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 236189386 . C . PASS END=236189400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr1 236189401 . C . PASS END=236189435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:17:0,44,615:0,44,255:19,0 chr1 236189436 . T . PASS END=236189436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 236189437 . G . PASS END=236189438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 236189439 . T . PASS END=236189439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 236189440 . C . PASS END=236189441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 236192850 . C . PASS END=236192860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr1 236192861 . T . PASS END=236192881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:19,0 chr1 236192882 . G . PASS END=236192894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:23,0 chr1 236192895 . C . PASS END=236192895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 236192896 . G . PASS END=236192923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:23:0,62,847:0,62,255:26,0 chr1 236192924 . C . PASS END=236192924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 236192925 . G . PASS END=236192925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 236192926 . G . PASS END=236192926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr1 236192927 . C . PASS END=236192927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 236192928 . C . PASS END=236192929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr1 236192930 . T . PASS END=236192930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236192931 . C . PASS END=236192931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 236192932 . C . PASS END=236192932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 236192933 . A . PASS END=236192933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 236192934 . G . PASS END=236192936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 236192937 . C . PASS END=236192937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 236192938 . C . PASS END=236192939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 236192940 . T . PASS END=236192940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr1 236192941 . G . PASS END=236192941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 236192942 . T . PASS END=236192954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:26,0 chr1 236192955 . G . PASS END=236192976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr1 236192977 . G . PASS END=236192977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 236192978 . A . PASS END=236192983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:31,0 chr1 236192984 . T . PASS END=236192985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr1 236192986 . C . PASS END=236192992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,93,255:31,0 chr1 236192993 . A . PASS END=236192993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 236192994 . C . PASS END=236193005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 236193006 . G . PASS END=236193006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 236193007 . G . PASS END=236193007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 236193008 . T . PASS END=236193009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr1 236193010 . C . PASS END=236193010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 236193011 . C . PASS END=236193026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:25:0,60,900:0,74,255:27,0 chr1 236193027 . C . PASS END=236193027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr1 236193028 . A . PASS END=236193031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 236193032 . T . PASS END=236193050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 236195701 . C . PASS END=236195707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr1 236195708 . G . PASS END=236195715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr1 236195716 . C . PASS END=236195716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr1 236195717 . A . PASS END=236195729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:28,0 chr1 236195730 . T . PASS END=236195910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1072:0,80,255:39,0 chr1 236195911 . A . PASS END=236195911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:26,0 chr1 236195912 . G . PASS END=236195917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 236195918 . T . PASS END=236195918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr1 236195919 . C . PASS END=236195923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 236195924 . C . PASS END=236195934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:26,0 chr1 236195935 . T . PASS END=236195935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:23,0 chr1 236195936 . G . PASS END=236195944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr1 236195945 . G . PASS END=236195952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,800:0,55,255:19,0 chr1 236201404 . C . PASS END=236201407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,657:0,41,255:22,0 chr1 236201408 . T . PASS END=236201409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr1 236201410 . C . PASS END=236201410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 236201411 . A . PASS END=236201430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:25,0 chr1 236201431 . C . PASS END=236201431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 236201432 . C . PASS END=236201433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr1 236201434 . T . PASS END=236201434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr1 236201435 . A . PASS END=236201435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 236201436 . T . PASS END=236201439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr1 236201440 . C . PASS END=236201440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236201441 . A . PASS END=236201441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 236201442 . G . PASS END=236201442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236201443 . C . PASS END=236201447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr1 236201448 . C . PASS END=236201449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236201450 . G . PASS END=236201450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr1 236201451 . C . PASS END=236201451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236201452 . T . PASS END=236201452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:25,0 chr1 236201453 . G . PASS END=236201455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 236201456 . G . PASS END=236201460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 236201461 . A . PASS END=236201461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:26,0 chr1 236201462 . G . PASS END=236201465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 236201466 . G . PASS END=236201467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr1 236201468 . G . PASS END=236201483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:32,0 chr1 236201484 . T . PASS END=236201484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr1 236201485 . C . PASS END=236201488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:29,0 chr1 236201489 . G . PASS END=236201489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 236201490 . T . PASS END=236201490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 236201491 . G . PASS END=236201491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 236201492 . C . PASS END=236201504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr1 236201505 . T . PASS END=236201505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr1 236201506 . G . PASS END=236201514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 236201515 . T . PASS END=236201515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 236201516 . A . PASS END=236201516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:27,0 chr1 236201517 . G . PASS END=236201519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr1 236201520 . C . PASS END=236201528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr1 236201529 . C . PASS END=236201534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 236201535 . T . PASS END=236201542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 236201543 . A . PASS END=236201543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 236201544 . T . PASS END=236201553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,893:0,64,255:26,0 chr1 236205210 . C . PASS END=236205224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,374:0,36,255:13,0 chr1 236205225 . C . PASS END=236205225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 236205226 . A . PASS END=236205226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 236205227 . A . PASS END=236205230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 236205231 . C . PASS END=236205231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 236205232 . A . PASS END=236205236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,466:0,42,255:14,0 chr1 236205237 . C . PASS END=236205237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 236205238 . A . PASS END=236205240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr1 236205241 . T . PASS END=236205241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 236205242 . A . PASS END=236205242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,468:0,17,255:15,0 chr1 236205243 . T . PASS END=236205244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 236205245 . A . PASS END=236205245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 236205246 . C . PASS END=236205264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,584:0,51,255:19,0 chr1 236205265 . A . PASS END=236205265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:18,0 chr1 236205266 . A . PASS END=236205267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 236205268 . A . PASS END=236205269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 236205270 . T . PASS END=236205270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,697:0,49,255:21,0 chr1 236205271 . C . PASS END=236205278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:22,0 chr1 236205279 . C . PASS END=236205279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr1 236205280 . C . PASS END=236205286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,776:0,66,255:22,0 chr1 236205287 . A . PASS END=236205287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 236205288 . A . PASS END=236205298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 236205299 . C . PASS END=236205300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 236205301 . C . PASS END=236205309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 236205310 . A . PASS END=236205311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 236205312 . G . PASS END=236205318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 236205319 . G . PASS END=236205319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 236205320 . G . PASS END=236205329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 236205330 . T . PASS END=236205330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr1 236205331 . A . PASS END=236205333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 236205334 . T . PASS END=236205387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,47,255:19,0 chr1 236205388 . T . PASS END=236205400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 236205401 . T . PASS END=236205412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr1 236205413 . G . PASS END=236205429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr1 236205430 . C . PASS END=236205430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 236205431 . A . PASS END=236205434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr1 236205435 . C . PASS END=236205451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1102:0,84,255:30,0 chr1 236205452 . A . PASS END=236205459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 236205460 . A . PASS END=236205490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,90,255:31,0 chr1 236205491 . T . PASS END=236205491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr1 236205492 . C . PASS END=236205506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1169:0,80,255:31,0 chr1 236205507 . T . PASS END=236205507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr1 236205508 . C . PASS END=236205529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1188:0,93,255:32,0 chr1 236205530 . T . PASS END=236205530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr1 236205531 . T . PASS END=236205536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:30,0 chr1 236205537 . T . PASS END=236205537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 236205538 . G . PASS END=236205547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1119:0,90,255:30,0 chr1 236205548 . C . PASS END=236205565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr1 236205566 . A . PASS END=236205566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 236205567 . C . PASS END=236205567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 236205568 . A . PASS END=236205592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:18,0 chr1 236208757 . T . PASS END=236208954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:33:0,85,1192:0,85,255:40,0 chr1 236208955 . G . PASS END=236208966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:25:0,72,1080:0,75,255:25,0 chr1 236208967 . G . PASS END=236208967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 236208968 . C . PASS END=236208983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 236211990 . C . PASS END=236212011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,570:0,45,255:18,0 chr1 236212012 . C . PASS END=236212038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr1 236212039 . G . PASS END=236212039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 236212040 . A . PASS END=236212052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:24,0 chr1 236212053 . A . PASS END=236212054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr1 236212055 . C . PASS END=236212093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,848:0,61,255:26,0 chr1 236212094 . C . PASS END=236212108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,52,255:19,0 chr1 236212109 . C . PASS END=236212119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 236212120 . T . PASS END=236212120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 236212121 . G . PASS END=236212135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,64,255:28,0 chr1 236212136 . A . PASS END=236212138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 236212139 . A . PASS END=236212139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 236212140 . G . PASS END=236212160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr1 236212161 . C . PASS END=236212161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 236212162 . C . PASS END=236212162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236212163 . C . PASS END=236212163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 236212164 . C . PASS END=236212169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 236212170 . A . PASS END=236212170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 236212171 . T . PASS END=236212176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 236212177 . G . PASS END=236212177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr1 236212178 . T . PASS END=236212235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:32,0 chr1 236212236 . A . PASS END=236212242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1086:0,77,255:26,0 chr1 236212243 . T . PASS END=236212245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 236212246 . T . PASS END=236212246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 236212247 . T . PASS END=236212266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 236212267 . G . PASS END=236212288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:24:0,66,970:0,67,255:26,0 chr1 236212289 . C . PASS END=236212289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 236228155 . G . PASS END=236228155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 236228156 . T . PASS END=236228156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 236228157 . A . PASS END=236228168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 236228169 . T . PASS END=236228187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr1 236228188 . G . PASS END=236228199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,241:6,0 chr1 236228200 . A . PASS END=236228209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr1 236228210 . A . PASS END=236228210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr1 236228211 . G . PASS END=236228219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr1 236228220 . A . PASS END=236228220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 236228221 . G . PASS END=236228242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr1 236228243 . A . PASS END=236228253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 236228254 . C . PASS END=236228289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr1 236228290 . G . PASS END=236228301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr1 236228302 . C . PASS END=236228328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:9,0 chr1 236228329 . C . PASS END=236228344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 236228345 . C . PASS END=236228379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr1 236305923 . A . PASS END=236305956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,304:0,24,255:9,0 chr1 236305957 . C . PASS END=236306005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr1 236306006 . G . PASS END=236306008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr1 236306009 . G . PASS END=236306009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 236306010 . C . PASS END=236306011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr1 236306012 . G . PASS END=236306020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 236306021 . G . PASS END=236306026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr1 236306027 . G . PASS END=236306027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 236306028 . G . PASS END=236306030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr1 236306031 . G . PASS END=236306032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr1 236306033 . G . PASS END=236306040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:19,0 chr1 236306041 . A . PASS END=236306049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:21,0 chr1 236306050 . T . PASS END=236306050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 236306051 . T . PASS END=236306055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr1 236306056 . T . PASS END=236306056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr1 236306057 . C . PASS END=236306060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 236306061 . G . PASS END=236306062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 236306063 . C . PASS END=236306071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,67,255:22,0 chr1 236306072 . C . PASS END=236306072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 236306073 . G . PASS END=236306073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 236306074 . T . PASS END=236306074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,821:0,45,255:24,0 chr1 236306075 . G . PASS END=236306078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236306079 . T . PASS END=236306079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:27,0 chr1 236306080 . A . PASS END=236306081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 236306082 . G . PASS END=236306092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1054:0,84,255:29,0 chr1 236306093 . C . PASS END=236306094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr1 236306095 . T . PASS END=236306100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 236306101 . T . PASS END=236306110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 236306111 . G . PASS END=236306112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr1 236306113 . T . PASS END=236306113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:26,0 chr1 236306114 . C . PASS END=236306117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 236306118 . C . PASS END=236306120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 236306121 . G . PASS END=236306138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 236306139 . A . PASS END=236306139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 236306140 . A . PASS END=236306141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236306142 . C . PASS END=236306147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr1 236306148 . A . PASS END=236306159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 236306160 . G . PASS END=236306161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,791:0,67,255:27,0 chr1 236306162 . C . PASS END=236306165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 236306166 . C . PASS END=236306166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 236306167 . T . PASS END=236306168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236306169 . T . PASS END=236306169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr1 236306170 . T . PASS END=236306170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236306171 . T . PASS END=236306172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 236306173 . T . PASS END=236306174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236306175 . T . PASS END=236306176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,956:0,70,255:26,0 chr1 236306177 . C . PASS END=236306177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,984:0,48,255:25,0 chr1 236306178 . C . PASS END=236306187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,970:0,70,255:26,0 chr1 236306188 . C . PASS END=236306189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 236306190 . T . PASS END=236306190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 236306191 . C . PASS END=236306193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236306194 . T . PASS END=236306194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 236306195 . G . PASS END=236306198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236306199 . A . PASS END=236306208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 236306209 . T . PASS END=236306209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,877:0,54,255:24,0 chr1 236306210 . C . PASS END=236306237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,917:0,64,255:26,0 chr1 236306238 . G . PASS END=236306245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr1 236306246 . G . PASS END=236306246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 236306247 . C . PASS END=236306249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr1 236306250 . A . PASS END=236306260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,76,255:26,0 chr1 236306261 . C . PASS END=236306262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 236306263 . T . PASS END=236306263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,891:0,73,255:27,0 chr1 236306264 . C . PASS END=236306266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 236306267 . G . PASS END=236306269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 236306270 . G . PASS END=236306276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 236306277 . T . PASS END=236306277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 236306278 . G . PASS END=236306283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 236306284 . C . PASS END=236306284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 236306285 . T . PASS END=236306293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr1 236306294 . G . PASS END=236306305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,972:0,68,255:26,0 chr1 236306306 . C . PASS END=236306308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr1 236306309 . C . PASS END=236306321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:26,0 chr1 236306322 . T . PASS END=236306336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:19:0,49,699:0,49,255:19,0 chr1 236332001 . T . PASS END=236332055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,102,1800:0,102,255:40,2 chr1 236341714 . G . PASS END=236341921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:32:0,82,1081:0,82,255:40,0 chr1 236341922 . T . PASS END=236341922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:31,0 chr1 236341923 . A . PASS END=236341923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1129:0,55,255:30,0 chr1 236341924 . C . PASS END=236341927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1143:0,85,255:33,0 chr1 236341928 . G . PASS END=236341936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1125:0,69,255:26,0 chr1 236343179 . G . PASS END=236343180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 236343181 . C . PASS END=236343188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 236343189 . T . PASS END=236343189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr1 236343190 . G . PASS END=236343190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 236343191 . T . PASS END=236343191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 236343192 . G . PASS END=236343313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:31:0,89,1105:0,89,255:40,0 chr1 236343314 . A . PASS END=236343314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1269:0,62,255:32,0 chr1 236343315 . A . PASS END=236343315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 236343316 . T . PASS END=236343316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:28,0 chr1 236343317 . G . PASS END=236343317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 236343318 . T . PASS END=236343318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1160:0,39,255:27,0 chr1 236343319 . A . PASS END=236343328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:30:0,66,990:0,74,255:25,0 chr1 236347078 . G . PASS END=236347199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:37:0,90,1305:0,91,255:40,1 chr1 236347200 . G . PASS END=236347206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:33:0,66,1080:0,66,255:24,0 chr1 236368426 . A . PASS END=236368550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:35:0,84,1279:0,84,255:40,0 chr1 236370433 . G . PASS END=236370481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:71:0,120,1800:0,198,255:40,0 chr1 236371350 . T . PASS END=236371447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:43:0,86,1305:0,86,255:40,0 chr1 236371448 . G . PASS END=236371448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1510:0,74,255:29,0 chr1 236371449 . C . PASS END=236371458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,91,255:31,0 chr1 236381816 . T . PASS END=236381824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:71:0,120,1800:0,209,255:40,0 chr1 236381825 . G C, 49.93 PASS DP=77;MQ=250.00;MQRankSum=7.493;ReadPosRankSum=5.768;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,37,0:0.487,0.000:76:19,24,0:20,13,0:48:85,0,50,1286,1395,2681:255,0,255:39,0:4.9931e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,17,21,16:18,21,22,15 chr1 236381826 . T . PASS END=236381876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,210,255:40,0 chr1 236384128 . T . PASS END=236384240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:48:0,120,1800:0,132,255:40,0 chr1 236384241 . T . PASS END=236384265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:44:0,83,1440:0,83,255:40,0 chr1 236385224 . C . PASS END=236385310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,109,1537:0,109,255:40,0 chr1 236388370 . C . PASS END=236388439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,142,255:40,0 chr1 236389569 . T . PASS END=236389577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1332:0,92,255:35,0 chr1 236389578 . T . PASS END=236389578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1214:0,72,255:32,0 chr1 236389579 . G . PASS END=236389613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1306:0,93,255:40,0 chr1 236389614 . T . PASS END=236389614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1295:0,76,255:37,0 chr1 236389615 . C . PASS END=236389815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:38:0,84,1260:0,102,255:40,0 chr1 236389947 . C . PASS END=236390039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:61:0,120,1800:0,162,255:40,0 chr1 236393524 . C . PASS END=236393550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:91:0,120,1800:0,255,255:40,0 chr1 236396128 . C . PASS END=236396139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:87:0,120,1800:0,245,255:40,0 chr1 236397484 . C . PASS END=236397602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,1:121:99:67:0,120,1800:0,168,255:40,0 chr1 236399089 . C . PASS END=236399164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,115,1688:0,115,255:40,0 chr1 236399578 . T . PASS END=236399578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1096:0,77,255:33,0 chr1 236399579 . T . PASS END=236399588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:37:0,80,1114:0,80,255:37,0 chr1 236399589 . C . PASS END=236399589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1119:0,39,255:33,0 chr1 236399590 . T . PASS END=236399612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1228:0,84,255:40,0 chr1 236399613 . T . PASS END=236399613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1301:0,76,255:38,0 chr1 236399614 . C . PASS END=236399698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:29:0,81,1094:0,81,255:40,0 chr1 236406722 . C . PASS END=236406795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,164,255:40,0 chr1 236413185 . C . PASS END=236413188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr1 236413189 . A . PASS END=236413229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,156,255:40,0 chr1 236413230 . T A, 49.40 PASS DP=79;MQ=249.88;MQRankSum=7.572;ReadPosRankSum=4.816;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,36,0:0.462,0.000:78:21,15,0:21,21,0:48:84,0,50,1172,1467,2644:255,0,255:38,0:4.9396e+01,7.1705e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,18,10,26:21,21,19,17 chr1 236413231 . C . PASS END=236413267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,182,255:40,0 chr1 236415350 . C . PASS END=236415384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,151,255:40,0 chr1 236415385 . T . PASS END=236415391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:65:0,120,1800:0,165,255:40,0 chr1 236416722 . C . PASS END=236416724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr1 236416725 . T . PASS END=236416725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr1 236416726 . G . PASS END=236416767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:34:0,98,1229:0,98,255:40,0 chr1 236416768 . T . PASS END=236416768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1397:0,74,255:40,0 chr1 236416769 . C . PASS END=236416805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:41:0,93,1465:0,93,255:40,0 chr1 236433175 . C . PASS END=236433181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,177,255:40,0 chr1 236433182 . T . PASS END=236433294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:46:0,120,1800:0,131,255:40,0 chr1 236444982 . C . PASS END=236445010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:18,0 chr1 236445011 . T . PASS END=236445018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 236445019 . A . PASS END=236445019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr1 236445020 . C . PASS END=236445021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr1 236445022 . A . PASS END=236445022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 236445023 . G . PASS END=236445068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:18,0 chr1 236445069 . G . PASS END=236445083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,31,255:12,0 chr1 236557745 . A . PASS END=236557770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,120,1800:0,126,255:40,0 chr1 236557771 . G A, 208.13 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,22,0:0,32,0:158:246,161,0,346,346,346:255,162,0:0,0:2.0813e+02,1.5813e+02,0.0000e+00,3.4290e+02,3.7767e+02,3.4591e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,23,31:0,0,27,27 chr1 236557772 . G . PASS END=236557805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,121,255:40,0 chr1 236558930 . A . PASS END=236558959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1205:0,91,255:33,0 chr1 236558960 . G . PASS END=236558960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 236572516 . A . PASS END=236572575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:70:0,120,1800:0,198,255:40,0 chr1 236577554 . C . PASS END=236577554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr1 236577560 . T . PASS END=236577599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:80:0,120,1800:0,201,255:40,0 chr1 236590679 . T . PASS END=236590679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr1 236590692 . C . PASS END=236590726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,3:103:99:98:0,120,1800:0,233,255:40,0 chr1 236590727 . C . PASS END=236590750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:97:0,120,1800:0,236,255:40,0 chr1 236631516 . C . PASS END=236631516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,160,255:40,0 chr1 236631531 . G . PASS END=236631576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,129,255:40,0 chr1 236645567 . A . PASS END=236645567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:25,0 chr1 236645568 . G . PASS END=236645588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,964:0,84,255:31,0 chr1 236645589 . C . PASS END=236645589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 236645590 . A . PASS END=236645632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1044:0,85,255:34,0 chr1 236645633 . C . PASS END=236645669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1211:0,88,255:35,0 chr1 236645670 . C T, 49.94 PASS DP=35;MQ=250.00;MQRankSum=5.033;ReadPosRankSum=2.360;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,17,0:0.486,0.000:35:10,5,0:8,12,0:48:85,0,50,607,628,1234:255,0,255:17,0:4.9936e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,13,4:10,8,5,12 chr1 236645671 . G . PASS END=236645707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:33:0,85,1295:0,85,255:40,0 chr1 236645708 . T . PASS END=236645862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,88,255:38,0 chr1 236645863 . A . PASS END=236645863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 236645864 . G . PASS END=236645877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 236645878 . A . PASS END=236645878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,926:0,73,255:28,0 chr1 236645879 . A . PASS END=236645884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 236645885 . T . PASS END=236645909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1000:0,68,255:26,0 chr1 236645910 . G . PASS END=236645910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr1 236645911 . C . PASS END=236645929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr1 236645930 . A . PASS END=236645930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 236645931 . C . PASS END=236645932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 236645933 . C . PASS END=236645933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:22,0 chr1 236645934 . C . PASS END=236645934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:23,0 chr1 236645935 . T . PASS END=236645941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr1 236645942 . A . PASS END=236645949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr1 236645961 . T . PASS END=236645961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 236646049 . C . PASS END=236646049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr1 236646064 . A . PASS END=236646064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 236646144 . G . PASS END=236646144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 236646221 . G . PASS END=236646221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 236646234 . G . PASS END=236646234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 236646298 . C . PASS END=236646298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 236646303 . G . PASS END=236646303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1390:0,114,255:38,0 chr1 236646366 . G . PASS END=236646366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1349:0,95,255:35,0 chr1 236646507 . C . PASS END=236646507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr1 236646535 . T . PASS END=236646535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,151,255:40,0 chr1 236646577 . G . PASS END=236646577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 236646668 . C . PASS END=236646668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1590:0,116,255:40,0 chr1 236646695 . G . PASS END=236646695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 236646706 . A . PASS END=236646706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 236646714 . G . PASS END=236646714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 236646812 . C . PASS END=236646812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 236646869 . C . PASS END=236646870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:31,0 chr1 236646916 . A . PASS END=236646916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 236646920 . C . PASS END=236646920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1373:0,108,255:36,0 chr1 236646953 . G . PASS END=236646953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 236646961 . A . PASS END=236646961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1607:0,119,255:40,0 chr1 236647021 . C . PASS END=236647021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 236647098 . G . PASS END=236647098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 236647199 . C . PASS END=236647199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:16,0 chr1 236647211 . C . PASS END=236647211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr1 236647252 . T . PASS END=236647252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 236647387 . C . PASS END=236647387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 236647407 . G . PASS END=236647407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:31,0 chr1 236647457 . C . PASS END=236647457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 236647484 . C . PASS END=236647484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr1 236647672 . G . PASS END=236647672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 236647687 . A . PASS END=236647687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr1 236647737 . G . PASS END=236647737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 236647758 . C . PASS END=236647758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 236647820 . C . PASS END=236647820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 236647836 . G . PASS END=236647836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr1 236647911 . C . PASS END=236647911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 236647934 . A . PASS END=236647934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr1 236647957 . G . PASS END=236647957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 236647967 . C . PASS END=236647967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 236648001 . C . PASS END=236648001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,194:2,0 chr1 236648006 . C . PASS END=236648007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,172:2,0 chr1 236655037 . A . PASS END=236655039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 236655040 . A . PASS END=236655040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 236655041 . T . PASS END=236655048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,908:0,72,255:24,0 chr1 236655049 . G . PASS END=236655049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr1 236655050 . A . PASS END=236655050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 236689371 . A . PASS END=236689415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:76:0,120,1800:0,190,255:40,0 chr1 236700797 . G . PASS END=236700806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,105,1301:0,105,255:40,0 chr1 236700807 . T A, 173.40 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,22,0:0,20,0:123:211,126,0,1613,126,1613:255,126,0:0,0:1.7340e+02,1.2340e+02,0.0000e+00,4.5000e+02,1.5817e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,18:0,0,24,18 chr1 236700808 . T . PASS END=236700822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,115,1521:0,115,255:40,0 chr1 236700823 . T C, 191.46 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,24,0:0,24,0:141:229,144,0,1851,144,1851:255,144,0:0,0:1.9146e+02,1.4146e+02,0.0000e+00,4.5000e+02,1.7623e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,23:0,0,23,25 chr1 236700824 . G . PASS END=236700856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,111,1730:0,111,255:40,0 chr1 236700857 . C T, 197.47 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,24,0:0,26,0:147:235,150,0,335,335,335:255,150,0:0,0:1.9747e+02,1.4747e+02,0.0000e+00,3.3224e+02,3.6701e+02,3.3525e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,33:0,0,29,21 chr1 236700858 . G . PASS END=236700885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,128,255:40,0 chr1 236702179 . A . PASS END=236702179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236702180 . T . PASS END=236702180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 236702181 . T . PASS END=236702181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr1 236702182 . C . PASS END=236702207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1125:0,90,255:35,0 chr1 236702208 . G . PASS END=236702208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:35,0 chr1 236702209 . C T, 150.57 PASS DP=36;MQ=250.00;FractionInformativeReads=0.972 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,35,0:1.000,0.000:35:0,12,0:0,23,0:101:188,104,0,288,288,288:255,111,0:0,0:1.5057e+02,1.0057e+02,0.0000e+00,2.8534e+02,3.2011e+02,2.8835e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,26,9:0,0,11,24:236702209 chr1 236702210 . A G, 153.26 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,37,0:1.000,0.000:37:0,14,0:0,23,0:103:191,106,0,291,291,291:255,114,0:0,0:1.5326e+02,1.0326e+02,0.0000e+00,2.8803e+02,3.2280e+02,2.9104e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,28,9:0,0,13,24:236702209 chr1 236702211 . T . PASS END=236702236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1283:0,87,255:40,0 chr1 236702237 . C . PASS END=236702237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1169:0,73,255:36,0 chr1 236702238 . A . PASS END=236702252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:41:0,89,1093:0,89,255:40,0 chr1 236702253 . T . PASS END=236702336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:43:0,96,1384:0,96,255:40,0 chr1 236702337 . A . PASS END=236702373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,111,1552:0,115,255:40,0 chr1 236702374 . G A, 178.51 PASS DP=47;MQ=249.37;FractionInformativeReads=0.936 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,21,0:0,23,0:129:216,132,0,1639,132,1639:255,135,0:0,0:1.7851e+02,1.2851e+02,0.0000e+00,4.5000e+02,1.6328e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,30:0,0,25,19 chr1 236702375 . A . PASS END=236702389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:42:0,93,1398:0,93,255:40,0 chr1 236703864 . G . PASS END=236703869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:37,0 chr1 236703870 . G . PASS END=236703870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr1 236703871 . T . PASS END=236703878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,111,1328:0,111,255:40,0 chr1 236703879 . A . PASS END=236703951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,99,1443:0,99,255:40,0 chr1 236703952 . A . PASS END=236703952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1372:0,73,255:32,0 chr1 236703953 . T . PASS END=236703980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1210:0,86,255:34,0 chr1 236703981 . T . PASS END=236703981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr1 236703982 . C . PASS END=236703982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 236703983 . G . PASS END=236703983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 236704954 . G . PASS END=236705010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,143,255:40,0 chr1 236706061 . G . PASS END=236706087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,159,255:40,0 chr1 236706215 . C . PASS END=236706314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:71:0,120,1800:0,185,255:40,0 chr1 236706315 . T . PASS END=236706346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:71:0,120,1800:0,212,255:40,0 chr1 236706860 . A . PASS END=236706861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 236706862 . G C, 142.40 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,19,0:0,13,0:92:180,95,0,1180,95,1180:255,96,0:0,0:1.4240e+02,9.2396e+01,0.0000e+00,4.5000e+02,1.2717e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,14:0,0,17,15 chr1 236706863 . C . PASS END=236706879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1288:0,99,255:35,0 chr1 236706880 . G . PASS END=236706880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1449:0,76,255:37,0 chr1 236706881 . T . PASS END=236706899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,107,1458:0,107,255:40,0 chr1 236706900 . C . PASS END=236706900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 236706901 . T . PASS END=236706901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1474:0,74,255:40,0 chr1 236706902 . G . PASS END=236706948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1440:0,104,255:40,0 chr1 236708050 . C . PASS END=236708068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,119,1629:0,119,255:40,0 chr1 236708069 . G . PASS END=236708186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,106,1737:0,106,255:40,0 chr1 236708187 . T . PASS END=236708215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,105,1590:0,105,255:40,0 chr1 236708462 . C . PASS END=236708498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:65:0,120,1800:0,180,255:40,0 chr1 236708499 . C . PASS END=236708521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:63:0,84,1260:0,165,255:40,0 chr1 236711312 . A . PASS END=236711322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:30:0,86,1149:0,86,255:37,0 chr1 236711323 . T C, 160.91 PASS DP=38;MQ=249.69;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,19,0:0,19,0:111:199,114,0,1436,114,1436:255,114,0:0,0:1.6091e+02,1.1091e+02,0.0000e+00,4.5000e+02,1.4568e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,15:0,0,24,14 chr1 236711324 . T . PASS END=236711360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,111,1665:0,114,255:40,0 chr1 236711361 . T . PASS END=236711461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,111,1665:0,140,255:40,0 chr1 236714202 . T . PASS END=236714242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:94:52:0,94,1800:0,94,255:40,0 chr1 236714243 . G . PASS END=236714273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:81:58:0,81,1215:0,105,255:40,0 chr1 236714274 . T . PASS END=236714277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:63:55:0,63,945:0,99,255:25,0 chr1 236714278 . T . PASS END=236714283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:42:51:0,42,630:0,114,255:18,0 chr1 236714284 . C . PASS END=236714290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:36:47:0,36,540:0,74,255:13,1 chr1 236715299 . C . PASS END=236715407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:41:0,105,1575:0,109,255:40,0 chr1 236716881 . C . PASS END=236716893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,860:0,69,255:26,0 chr1 236716894 . T . PASS END=236716904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 236716905 . T . PASS END=236716905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 236716906 . A . PASS END=236716921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 236716922 . T . PASS END=236716925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr1 236716926 . T . PASS END=236716936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 236716937 . G . PASS END=236716958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,995:0,87,255:32,0 chr1 236716959 . C T, 148.87 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,13,0:0,21,0:99:187,102,0,1287,102,1287:255,102,0:0,0:1.4887e+02,9.8869e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,15:0,0,20,14 chr1 236716960 . G . PASS END=236716996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1233:0,86,255:35,0 chr1 236716997 . C . PASS END=236717016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1111:0,85,255:34,0 chr1 236717017 . T . PASS END=236717017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1064:0,69,255:30,0 chr1 236717018 . C . PASS END=236717039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:32,0 chr1 236717898 . C . PASS END=236717925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:39:0,114,1710:0,115,255:40,0 chr1 236717926 . T C, 214.17 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,34,0:0,22,0:164:252,167,0,2048,167,2048:255,168,0:0,0:2.1417e+02,1.6417e+02,0.0000e+00,4.5000e+02,1.9894e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,19:0,0,35,21 chr1 236717927 . C . PASS END=236717963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,158,255:40,0 chr1 236717964 . A . PASS END=236718052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,114,1710:0,120,255:40,0 chr1 236718596 . C . PASS END=236718619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,117,1429:0,117,255:40,0 chr1 236718620 . T C, 212.07 PASS DP=55;MQ=249.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,33,0:0,22,0:162:250,165,0,2087,165,2087:255,165,0:0,0:2.1207e+02,1.6207e+02,0.0000e+00,4.5000e+02,1.9684e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,17:0,0,28,27 chr1 236718621 . C . PASS END=236718657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,163,255:40,0 chr1 236718658 . A . PASS END=236718764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,117,1755:0,125,255:40,0 chr1 236718851 . C . PASS END=236718955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,126,255:40,0 chr1 236719105 . C . PASS END=236719134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1263:0,86,255:35,0 chr1 236719135 . T C, 149.33 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:99:187,102,0,1319,102,1319:255,102,0:0,0:1.4933e+02,9.9331e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,14:0,0,19,15 chr1 236719136 . T . PASS END=236719192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1119:0,83,255:33,0 chr1 236719193 . A G, 143.23 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,17,0:0,15,0:93:181,96,0,281,281,281:255,96,0:0,0:1.4323e+02,9.3231e+01,0.0000e+00,2.7800e+02,3.1277e+02,2.8101e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,15:0,0,22,10 chr1 236719194 . C . PASS END=236719197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1202:0,96,255:32,0 chr1 236719198 . A . PASS END=236719198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:30,0 chr1 236719199 . A . PASS END=236719204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1134:0,85,255:33,0 chr1 236719205 . T . PASS END=236719205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:32,0 chr1 236719206 . C . PASS END=236719225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,89,255:35,0 chr1 236719226 . G . PASS END=236719226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 236719227 . G . PASS END=236719230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr1 236719231 . C . PASS END=236719239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:26,0 chr1 236719400 . C . PASS END=236719558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:40:0,87,1305:0,88,255:40,0 chr1 236720495 . C . PASS END=236720495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1335:0,105,255:35,0 chr1 236720496 . T . PASS END=236720496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:33,0 chr1 236720497 . G . PASS END=236720602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1251:0,91,255:40,0 chr1 236720603 . C . PASS END=236720627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:24,0 chr1 236720628 . A . PASS END=236720628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 236720629 . G . PASS END=236720645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr1 236721537 . C . PASS END=236721553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,681:0,41,255:19,0 chr1 236721554 . G . PASS END=236721571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr1 236721572 . G . PASS END=236721572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 236721573 . G . PASS END=236721575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 236721576 . G . PASS END=236721576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 236721577 . T . PASS END=236721584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr1 236721585 . G . PASS END=236721609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:37,0 chr1 236721610 . G A, 157.90 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,22,0:0,15,0:108:196,111,0,1389,111,1389:255,111,0:0,0:1.5790e+02,1.0790e+02,0.0000e+00,4.5000e+02,1.4267e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,13:0,0,23,14 chr1 236721611 . G . PASS END=236721659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:37:0,91,1382:0,91,255:40,0 chr1 236721660 . T C, 215.08 PASS DP=57;MQ=249.93;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,32,0:0,24,0:165:253,168,0,2126,168,2126:255,171,0:0,0:2.1508e+02,1.6508e+02,0.0000e+00,4.5000e+02,1.9985e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,24:0,0,28,28 chr1 236721661 . T . PASS END=236721730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:94:56:0,94,1800:0,94,255:40,0 chr1 236721731 . T C, 232.21 PASS DP=62;MQ=248.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,35,0:0,27,0:182:270,185,0,2303,185,2303:255,186,0:0,0:2.3221e+02,1.8221e+02,0.0000e+00,4.5000e+02,2.1698e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,32:0,0,27,35 chr1 236721732 . G . PASS END=236721768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,123,255:40,0 chr1 236721769 . C . PASS END=236721808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:34:0,81,1215:0,89,255:40,0 chr1 236721809 . C . PASS END=236721812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 236721813 . T . PASS END=236721827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:31,0 chr1 236721828 . A . PASS END=236721829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 236722295 . T . PASS END=236722295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236722296 . A . PASS END=236722296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr1 236722297 . T . PASS END=236722307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,979:0,84,255:28,0 chr1 236722308 . C . PASS END=236722309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:28,0 chr1 236722310 . G . PASS END=236722310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 236722311 . G . PASS END=236722311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr1 236722312 . A . PASS END=236722321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1241:0,90,255:32,0 chr1 236722322 . C . PASS END=236722322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:30,0 chr1 236722323 . T . PASS END=236722325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 236722326 . A . PASS END=236722326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr1 236722327 . G . PASS END=236722401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1136:0,80,255:36,0 chr1 236722402 . G . PASS END=236722402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 236722403 . A . PASS END=236722403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 236722404 . A . PASS END=236722404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 236722405 . T . PASS END=236722407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,82,255:27,0 chr1 236722408 . A . PASS END=236722420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:27:0,60,900:0,64,255:26,0 chr1 236722421 . C . PASS END=236722435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,42,255:19,0 chr1 236723014 . C . PASS END=236723019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,759:0,60,255:25,0 chr1 236723020 . T . PASS END=236723020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr1 236723021 . A . PASS END=236723029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,870:0,75,255:25,0 chr1 236723030 . T . PASS END=236723030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 236723031 . A . PASS END=236723035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr1 236723036 . T . PASS END=236723113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,92,255:39,0 chr1 236723114 . T . PASS END=236723114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 236723115 . A . PASS END=236723130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 236723131 . C . PASS END=236723131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 236723132 . A . PASS END=236723137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 236724525 . C . PASS END=236724541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:91:0,120,1800:0,190,255:40,0 chr1 236724542 . T . PASS END=236724567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:103:0,120,1800:0,253,255:40,0 chr1 236724568 . C . PASS END=236724571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,3:100:99:97:0,120,1800:0,229,255:40,0 chr1 236727798 . C . PASS END=236727961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,105,1363:0,105,255:40,0 chr1 236729219 . C . PASS END=236729345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,105,1575:0,114,255:40,0 chr1 236729946 . C . PASS END=236729963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,933:0,78,255:26,0 chr1 236729964 . C . PASS END=236729967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 236729968 . A . PASS END=236729968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 236729969 . G . PASS END=236729970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236729971 . A . PASS END=236729971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 236729972 . C . PASS END=236729985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1116:0,87,255:33,0 chr1 236729986 . T . PASS END=236729986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:32,0 chr1 236729987 . A . PASS END=236730054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:32:0,80,1144:0,80,255:35,0 chr1 236730055 . A . PASS END=236730055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:30,0 chr1 236730056 . C . PASS END=236730093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:34,0 chr1 236730094 . A . PASS END=236730094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 236730095 . G . PASS END=236730097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr1 236730098 . C . PASS END=236730098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:29,0 chr1 236730099 . A . PASS END=236730106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr1 236730107 . A . PASS END=236730107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,967:0,79,255:28,0 chr1 236730108 . T . PASS END=236730112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 236730113 . T . PASS END=236730113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 236730114 . A . PASS END=236730119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 236730120 . T . PASS END=236730149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,878:0,67,255:26,0 chr1 236730150 . A . PASS END=236730150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 236730151 . A . PASS END=236730165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:24,0 chr1 236730166 . C . PASS END=236730174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,53,255:18,0 chr1 236730175 . G . PASS END=236730176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:24:0,39,585:0,72,255:13,0 chr1 236732296 . C . PASS END=236732424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,113,1800:0,113,255:40,0 chr1 236734651 . C . PASS END=236734657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:25,0 chr1 236734658 . A . PASS END=236734658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr1 236734659 . T . PASS END=236734671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr1 236734672 . G . PASS END=236734772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1080:0,84,255:40,0 chr1 236734868 . C . PASS END=236734986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,99,1485:0,109,255:40,0 chr1 236735711 . C . PASS END=236735854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,122,255:40,0 chr1 236736025 . T . PASS END=236736128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:50:0,120,1800:0,126,255:40,0 chr1 236737502 . C . PASS END=236737633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:38:0,101,1449:0,101,255:40,0 chr1 236737961 . C . PASS END=236737961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 236737962 . T . PASS END=236737962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 236737963 . T . PASS END=236737965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236737966 . C . PASS END=236737966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr1 236737967 . A . PASS END=236737970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1008:0,68,255:26,0 chr1 236737971 . G . PASS END=236738203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:30:0,87,1190:0,89,255:40,0 chr1 236739519 . C . PASS END=236739677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,108,1620:0,123,255:40,0 chr1 236740080 . C . PASS END=236740191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,86,255:40,0 chr1 236740192 . G . PASS END=236740192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:27,0 chr1 236740193 . C . PASS END=236740197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 236740198 . C . PASS END=236740199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr1 236740200 . A . PASS END=236740200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 236740201 . C . PASS END=236740201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,996:0,59,255:28,0 chr1 236740202 . G . PASS END=236740205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 236740206 . T . PASS END=236740229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,890:0,62,255:26,0 chr1 236740230 . A . PASS END=236740249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,57,255:17,0 chr1 236744522 . C . PASS END=236744671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:40:0,105,1484:0,105,255:40,0 chr1 236744672 . C . PASS END=236744711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:90:49:0,90,1350:0,130,255:40,0 chr1 236744712 . C A, 190.09 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,20,0:0,28,0:140:228,143,0,1755,143,1755:255,147,0:0,0:1.9009e+02,1.4009e+02,0.0000e+00,4.5000e+02,1.7486e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,32:0,0,26,22 chr1 236744713 . A . PASS END=236744714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:90:47:0,90,1350:0,111,255:30,0 chr1 236746036 . C . PASS END=236746130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:41:0,91,1440:0,91,255:40,0 chr1 236746131 . T . PASS END=236746131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:31,0 chr1 236746132 . G . PASS END=236746157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1260:0,103,255:38,0 chr1 236746158 . T . PASS END=236746161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:77:35:0,77,1170:0,77,255:31,0 chr1 236746162 . C . PASS END=236746172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1142:0,85,255:29,0 chr1 236746313 . C . PASS END=236746405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,119,1637:0,119,255:40,0 chr1 236746406 . T . PASS END=236746442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:37:0,84,1260:0,97,255:40,0 chr1 236746443 . C T, 161.34 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,19,0:0,19,0:111:199,114,0,299,299,299:255,114,0:0,0:1.6134e+02,1.1134e+02,0.0000e+00,2.9611e+02,3.3088e+02,2.9912e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,28:0,0,19,19 chr1 236746444 . A . PASS END=236746454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1157:0,82,255:31,0 chr1 236746455 . T . PASS END=236746455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,902:0,79,255:30,0 chr1 236746456 . C . PASS END=236746456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 236746457 . T . PASS END=236746457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,918:0,60,255:25,0 chr1 236746458 . G . PASS END=236746460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 236746461 . T . PASS END=236746478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,990:0,62,255:26,0 chr1 236746479 . C . PASS END=236746479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 236746480 . C . PASS END=236746480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 236746481 . A . PASS END=236746481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 236746482 . T . PASS END=236746483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,717:0,36,255:19,0 chr1 236746484 . C . PASS END=236746484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 236746485 . T . PASS END=236746485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr1 236746486 . G . PASS END=236746489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 236746490 . G . PASS END=236746490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 236746491 . G . PASS END=236746496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 236748325 . C . PASS END=236748467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:42:0,120,1800:0,126,255:40,0 chr1 236748468 . G . PASS END=236748483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,135,255:40,0 chr1 236748484 . C . PASS END=236748484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:18:56:0,18,1644:0,18,255:40,0 chr1 236748485 . T . PASS END=236748504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,120,1800:0,131,255:40,0 chr1 236748505 . T C, 181.97 PASS DP=45;MQ=248.72;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,26,0:0,19,0:132:220,135,0,1698,135,1698:255,135,0:0,0:1.8197e+02,1.3197e+02,0.0000e+00,4.5000e+02,1.6674e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,32:0,0,22,23 chr1 236748506 . A . PASS END=236748516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,106,1413:0,106,255:39,0 chr1 236749120 . C . PASS END=236749241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:53:0,120,1800:0,152,255:40,0 chr1 236749541 . C . PASS END=236749546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:36:0,94,1280:0,94,255:37,0 chr1 236749547 . C . PASS END=236749547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1319:0,65,255:36,0 chr1 236749548 . C . PASS END=236749548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 236749549 . C . PASS END=236749549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1339:0,48,255:36,0 chr1 236749550 . A . PASS END=236749550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:34,0 chr1 236749551 . G . PASS END=236749611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:40:0,108,1620:0,120,255:40,0 chr1 236749612 . A . PASS END=236749648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,195,255:40,0 chr1 236749649 . T C, 296.80 PASS DP=83;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,83,0:1.000,0.000:83:0,39,0:0,44,0:247:335,250,0,3209,250,3209:255,250,0:0,0:2.9680e+02,2.4680e+02,0.0000e+00,4.5000e+02,2.8157e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,41,42:0,0,47,36 chr1 236749650 . A . PASS END=236749686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:73:0,120,1800:0,215,255:40,0 chr1 236749687 . T . PASS END=236749752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:46:0,97,1706:0,97,255:40,0 chr1 236750702 . C . PASS END=236750790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,186,255:40,0 chr1 236751248 . C . PASS END=236751343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,3:112:99:86:0,120,1800:0,236,255:40,0 chr1 236754147 . C . PASS END=236754254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,122,255:40,0 chr1 236755293 . C . PASS END=236755389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:90:0,120,1800:0,254,255:40,0 chr1 236755390 . A . PASS END=236755410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:78:0,120,1800:0,234,255:40,0 chr1 236755823 . T . PASS END=236755836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,200,255:40,0 chr1 236755837 . C T, 298.44 PASS DP=84;MQ=249.10;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,84,0:1.000,0.000:84:0,35,0:0,49,0:248:336,251,0,3161,251,3161:255,252,0:0,0:2.9844e+02,2.4844e+02,0.0000e+00,4.5000e+02,2.8321e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,62,22:0,0,37,47:236755814 chr1 236755838 . C . PASS END=236755874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:85:0,120,1800:0,230,255:40,0 chr1 236755875 . C . PASS END=236755892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:94:0,120,1800:0,171,255:40,0 chr1 236755893 . C . PASS END=236755921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:81:89:0,81,1215:0,227,255:40,0 chr1 236755922 . T . PASS END=236755925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:60:87:0,60,900:0,228,255:26,0 chr1 236755926 . A . PASS END=236755932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:42:83:0,42,630:0,200,255:18,0 chr1 236755933 . G . PASS END=236755933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:36:83:0,36,540:0,219,255:12,0 chr1 236757312 . C . PASS END=236757414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:52:0,120,1800:0,139,255:40,0 chr1 236758840 . C . PASS END=236758849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,115,1501:0,115,255:40,0 chr1 236758850 . A . PASS END=236758886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,108,1560:0,108,255:40,0 chr1 236758887 . T C, 245.62 PASS DP=66;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,33,0:0,33,0:196:283,199,0,383,383,383:255,199,0:0,0:2.4562e+02,1.9562e+02,0.0000e+00,3.8039e+02,4.1516e+02,3.8340e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,38,28:0,0,41,25 chr1 236758888 . G . PASS END=236758924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,168,255:40,0 chr1 236758925 . A . PASS END=236758973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:53:0,120,1800:0,121,255:40,0 chr1 236759133 . T . PASS END=236759134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 236759135 . T . PASS END=236759135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 236759136 . T . PASS END=236759137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:31,0 chr1 236759138 . C . PASS END=236759138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:29,0 chr1 236759139 . C . PASS END=236759141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:33:0,85,1118:0,85,255:29,0 chr1 236759142 . A . PASS END=236759142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:28,0 chr1 236759143 . G . PASS END=236759154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1164:0,83,255:32,0 chr1 236759155 . T . PASS END=236759155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr1 236759156 . C . PASS END=236759344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:34:0,96,1411:0,98,255:40,0 chr1 236760136 . C . PASS END=236760141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr1 236760142 . G . PASS END=236760142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 236760143 . A . PASS END=236760148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,740:0,66,255:22,0 chr1 236760149 . G . PASS END=236760149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr1 236760150 . G . PASS END=236760180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,816:0,66,255:26,0 chr1 236760181 . G . PASS END=236760184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236760185 . T . PASS END=236760185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 236760186 . C . PASS END=236760198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:30,0 chr1 236760199 . C . PASS END=236760199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 236760200 . G . PASS END=236760231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1105:0,80,255:33,0 chr1 236760232 . G . PASS END=236760232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr1 236760233 . A . PASS END=236760242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:31,0 chr1 236760243 . A . PASS END=236760253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,77,255:26,0 chr1 236760254 . C . PASS END=236760254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236760255 . T . PASS END=236760272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr1 236760273 . A . PASS END=236760273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 236760274 . A . PASS END=236760276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr1 236761178 . C . PASS END=236761279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,1117:0,80,255:40,0 chr1 236762783 . C . PASS END=236762924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:47:0,108,1620:0,141,255:40,0 chr1 236766456 . C . PASS END=236766676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:31:0,81,1215:0,91,255:40,0 chr1 236767254 . C . PASS END=236767262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 236767263 . A . PASS END=236767263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 236767264 . G . PASS END=236767276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 236767277 . T . PASS END=236767277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1117:0,60,255:30,0 chr1 236767278 . C . PASS END=236767292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1188:0,85,255:39,0 chr1 236767293 . C . PASS END=236767296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1473:0,104,255:39,0 chr1 236767297 . A . PASS END=236767297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1303:0,73,255:36,0 chr1 236767298 . G . PASS END=236767320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1319:0,95,255:37,0 chr1 236767321 . T . PASS END=236767321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr1 236767322 . T . PASS END=236767329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1274:0,94,255:36,0 chr1 236767330 . A G, 154.43 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,14,0:0,22,0:104:192,107,0,1330,107,1330:255,108,0:0,0:1.5443e+02,1.0443e+02,0.0000e+00,4.5000e+02,1.3920e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,18:0,0,18,18 chr1 236767331 . G . PASS END=236767349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:35,0 chr1 236767350 . T . PASS END=236767350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1122:0,69,255:29,0 chr1 236767351 . T . PASS END=236767363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:31,0 chr1 236767364 . A . PASS END=236767364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 236767365 . G . PASS END=236767367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr1 236767368 . G . PASS END=236767371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,1 chr1 236767372 . C . PASS END=236767372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 236767373 . A . PASS END=236767384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,74,255:26,0 chr1 236767385 . A . PASS END=236767395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:20:0,44,682:0,44,255:19,0 chr1 236849751 . C . LowDepth;LowGQ END=236849751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 236849815 . C . PASS END=236849815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 236849870 . C . PASS END=236849871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 236849967 . G . PASS END=236849967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr1 236849971 . G . PASS END=236849972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,164:3,0 chr1 236849974 . A . PASS END=236849977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr1 236849978 . A . PASS END=236849982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr1 236849983 . A . PASS END=236849984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,125:0,1,125:5,0 chr1 236849985 . A . PASS END=236849986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 236849987 . A . PASS END=236849987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr1 236849988 . G . PASS END=236849997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr1 236849998 . C . PASS END=236849998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 236849999 . A . LowGQ END=236849999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr1 236850000 . G . PASS END=236850031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr1 236850032 . T . PASS END=236850032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr1 236850033 . G . PASS END=236850036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 236850037 . C . PASS END=236850097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,156:6,0 chr1 236850098 . A . LowGQ END=236850098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,123:2,0,124:3,0 chr1 236850099 . G . PASS END=236850099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 236850102 . C . PASS END=236850102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 236850114 . G . PASS END=236850114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr1 236881155 . C . PASS END=236881155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1465:0,114,255:38,0 chr1 236881158 . A . PASS END=236881272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1215:0,102,255:40,0 chr1 236881274 . T . PASS END=236881274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,990:0,98,255:22,0 chr1 236882194 . G . PASS END=236882265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1141:0,82,255:40,0 chr1 236882266 . A . PASS END=236882277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:38:0,101,1413:0,101,255:37,0 chr1 236882278 . G . PASS END=236882278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:35,0 chr1 236882279 . C . PASS END=236882281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 236882282 . A . PASS END=236882282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1098:0,77,255:31,0 chr1 236882283 . G . PASS END=236882288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1280:0,80,255:34,0 chr1 236882289 . A . PASS END=236882289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1242:0,59,255:30,0 chr1 236882290 . A . PASS END=236882290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr1 236882291 . A . PASS END=236882291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:30,0 chr1 236882292 . C . PASS END=236882302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,86,255:30,0 chr1 236882303 . T C, 145.86 PASS DP=35;MQ=250.00;FractionInformativeReads=0.943 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,17,0:0,16,0:96:184,99,0,1248,99,1248:255,99,0:0,0:1.4586e+02,9.5859e+01,0.0000e+00,4.5000e+02,1.3063e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,20:0,0,17,16 chr1 236882304 . G . PASS END=236882306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 236882307 . G . PASS END=236882307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr1 236882308 . C . PASS END=236882312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 236882313 . G . PASS END=236882313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 236882318 . G . PASS END=236882318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 236883405 . A . PASS END=236883420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,116,1590:0,116,255:40,0 chr1 236883421 . C T, 181.05 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,22,0:0,23,0:131:219,134,0,1649,134,1649:255,135,0:0,0:1.8105e+02,1.3105e+02,0.0000e+00,4.5000e+02,1.6582e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,17:0,0,25,20 chr1 236883422 . G . PASS END=236883458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,138,255:40,0 chr1 236883459 . T . PASS END=236883491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,122,255:40,0 chr1 236889230 . C . PASS END=236889230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 236889233 . A . PASS END=236889320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:39:0,96,1440:0,99,255:40,0 chr1 236889326 . C . PASS END=236889326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 236890977 . G . PASS END=236891051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,994:0,80,255:35,0 chr1 236891052 . A . PASS END=236891052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 236891053 . C . PASS END=236891054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 236891055 . A . PASS END=236891055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1062:0,62,255:26,0 chr1 236891056 . G . PASS END=236891056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 236894530 . C . PASS END=236894530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr1 236894533 . G . PASS END=236894609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,179,255:40,0 chr1 236894610 . T . PASS END=236894615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 236897733 . A . PASS END=236897818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,114,1438:0,119,255:40,0 chr1 236898924 . T . PASS END=236898924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1380:0,101,255:38,0 chr1 236898935 . A . PASS END=236899020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1260:0,89,255:40,0 chr1 236899858 . G . PASS END=236899898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,114,1710:0,141,255:40,0 chr1 236899899 . TC T, 49.81 PASS DP=87;MQ=249.99;MQRankSum=7.972;ReadPosRankSum=3.813;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,41,0:0.477,0.000:86:23,21,0:22,20,0:48:79,0,50,1237,1351,2588:255,0,255:40,58:4.9809e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:21,24,18,23:23,22,22,19 chr1 236899900 . C . LowGQ END=236899901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:47,59:106:0:87:0,0,0:255,0,255:40,58 chr1 236899902 . C . PASS END=236899945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,190,255:40,0 chr1 236899946 . C . PASS END=236899968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,191,255:40,0 chr1 236900420 . A . PASS END=236900420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 236900422 . G . PASS END=236900514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,117,1800:0,117,255:40,0 chr1 236902602 . C . PASS END=236902606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr1 236902607 . G . PASS END=236902616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr1 236902617 . C . PASS END=236902617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 236902618 . G . PASS END=236902626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:24,0 chr1 236902627 . T . PASS END=236902627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 236902628 . C . PASS END=236902628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 236902629 . C . PASS END=236902629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr1 236902630 . C . PASS END=236902631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr1 236902632 . T . PASS END=236902640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 236902641 . A . PASS END=236902641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,856:0,50,255:25,0 chr1 236902642 . A . PASS END=236902647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr1 236902648 . C . PASS END=236902656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:32,0 chr1 236902657 . A . PASS END=236902659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1103:0,60,255:30,0 chr1 236902660 . C . PASS END=236902660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:30,0 chr1 236902661 . C . PASS END=236902664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr1 236902665 . C . PASS END=236902665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:30,0 chr1 236902666 . A . PASS END=236902668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr1 236902669 . C . PASS END=236902669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 236902670 . C . PASS END=236902678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:61:33:0,61,1182:0,61,255:30,0 chr1 236902679 . G . PASS END=236902679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 236902680 . A . PASS END=236902684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1211:0,66,255:30,0 chr1 236902685 . G . PASS END=236902685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:28,0 chr1 236902686 . G . PASS END=236902687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:30,0 chr1 236902688 . G . PASS END=236902688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 236902689 . G . PASS END=236902690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1078:0,44,255:28,0 chr1 236902691 . C . PASS END=236902691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr1 236902692 . T . PASS END=236902692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 236902693 . T . PASS END=236902694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr1 236902695 . C . PASS END=236902736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1169:0,80,255:35,0 chr1 236902737 . A . PASS END=236902737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1129:0,55,255:31,0 chr1 236902738 . A . PASS END=236902757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1196:0,85,255:34,0 chr1 236902758 . T . PASS END=236902758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:29,0 chr1 236902759 . T . PASS END=236902782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:31,0 chr1 236902783 . G . PASS END=236902783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 236902784 . G . PASS END=236902784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 236902785 . A . PASS END=236902797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,71,255:24,0 chr1 236902798 . C . PASS END=236902798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,62,255:19,0 chr1 236902799 . T . PASS END=236902799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 236902800 . G . PASS END=236902811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:21:0,50,767:0,50,255:19,0 chr1 236902812 . T . PASS END=236902812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 236902813 . C . PASS END=236902813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 236902814 . C . PASS END=236902814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 236902815 . G . PASS END=236902823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 236902824 . A . PASS END=236902826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:19:0,39,585:0,43,255:13,0 chr1 236902827 . G . PASS END=236902827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 236902828 . T . PASS END=236902832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr1 236902835 . G . PASS END=236902835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr1 236906186 . A . PASS END=236906186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 236906193 . C . PASS END=236906194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 236906196 . G . PASS END=236906344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1150:0,80,255:40,0 chr1 236906349 . T . PASS END=236906349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr1 236907923 . C . PASS END=236907924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 236907926 . G . PASS END=236907929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 236907930 . A . PASS END=236907930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr1 236907931 . G . PASS END=236907944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr1 236907945 . G . PASS END=236907993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr1 236907994 . C . PASS END=236907999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 236908000 . C . PASS END=236908001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 236908002 . C . PASS END=236908002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr1 236908003 . G . PASS END=236908003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 236908004 . A . PASS END=236908012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 236908013 . A . PASS END=236908013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 236908014 . G . PASS END=236908023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr1 236908024 . G . PASS END=236908035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 236908036 . G . PASS END=236908042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 236908043 . T . PASS END=236908062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr1 236908063 . G . PASS END=236908067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 236908068 . G . PASS END=236908076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr1 236908084 . C . PASS END=236908084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 236910424 . T . PASS END=236910424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 236910967 . T . PASS END=236910972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 236910973 . G . PASS END=236911074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1027:0,87,255:40,0 chr1 236911075 . G . PASS END=236911075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 236912424 . A . PASS END=236912559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1203:0,86,255:40,0 chr1 236912560 . T . PASS END=236912564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 236914770 . A . PASS END=236914789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,906:0,69,255:24,0 chr1 236914790 . G . PASS END=236914790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 236914791 . C . PASS END=236914792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 236914793 . G . PASS END=236914794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236914795 . T . PASS END=236914795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 236914796 . C . PASS END=236914862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:28:0,84,1055:0,84,255:40,2 chr1 236914863 . A . PASS END=236914863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1599:0,75,255:40,2 chr1 236914864 . A . PASS END=236914941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1260:0,95,255:40,0 chr1 236914942 . A . PASS END=236914952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 236914957 . G . PASS END=236914957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 236917247 . G . PASS END=236917247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 236917248 . T . PASS END=236917248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr1 236917249 . G . PASS END=236917249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 236917250 . A . PASS END=236917250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:25,0 chr1 236917251 . A . PASS END=236917255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 236917256 . C . PASS END=236917340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,978:0,81,255:33,0 chr1 236917341 . A . PASS END=236917351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 236917352 . A . PASS END=236917352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:24,0 chr1 236917353 . T . PASS END=236917377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,939:0,75,255:25,0 chr1 236917378 . G . PASS END=236917381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 236918313 . C . PASS END=236918313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr1 236918319 . G . PASS END=236918321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr1 236918322 . A . PASS END=236918322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 236918323 . T . PASS END=236918323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr1 236918324 . T . PASS END=236918324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr1 236918325 . G . PASS END=236918343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1105:0,93,255:34,0 chr1 236918344 . T . PASS END=236918344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr1 236918345 . C . PASS END=236918480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1190:0,84,255:40,0 chr1 236918481 . A . PASS END=236918481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:29,0 chr1 236918482 . C . PASS END=236918483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 236918484 . A . PASS END=236918484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:27,0 chr1 236918485 . A . PASS END=236918487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr1 236918488 . A . PASS END=236918488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 236918489 . C . PASS END=236918494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 236918495 . G . PASS END=236918498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 236918502 . C . PASS END=236918503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 236920783 . T . PASS END=236920783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr1 236920786 . C . PASS END=236920789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 236920790 . T . PASS END=236920790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 236920791 . T . PASS END=236920803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,845:0,66,255:26,0 chr1 236920804 . G . PASS END=236920821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:30,0 chr1 236920822 . A . PASS END=236920822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr1 236920823 . T . PASS END=236920848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 236920849 . A . PASS END=236920849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 236920850 . C . PASS END=236920890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr1 236920891 . C . PASS END=236920924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,842:0,62,255:26,0 chr1 236920925 . T . PASS END=236920925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr1 236920926 . T . PASS END=236920926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 236920927 . G . PASS END=236920932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,62,255:19,0 chr1 236923021 . C . PASS END=236923021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 236923024 . A . PASS END=236923089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:84:46:0,84,1623:0,84,255:40,0 chr1 236923094 . G . PASS END=236923094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 236923097 . A . PASS END=236923097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1482:0,107,255:39,0 chr1 236924310 . C . PASS END=236924310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 236924315 . G . PASS END=236924317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr1 236924318 . G . PASS END=236924318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 236924319 . A . PASS END=236924325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,576:0,51,255:17,0 chr1 236924326 . A . LowGQ END=236924326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,541:1,0,255:15,0 chr1 236924327 . T . PASS END=236924334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,714:0,54,255:19,0 chr1 236924335 . C . PASS END=236924355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,787:0,62,255:26,0 chr1 236924356 . C . PASS END=236924367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr1 236924368 . C . PASS END=236924369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 236924370 . C . PASS END=236924383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr1 236924384 . T . PASS END=236924384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 236924385 . C . PASS END=236924399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,981:0,87,255:29,0 chr1 236924400 . T . PASS END=236924400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 236924401 . G . PASS END=236924405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 236924406 . G . PASS END=236924407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 236924408 . G . PASS END=236924409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 236924410 . G . PASS END=236924415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr1 236924416 . T . PASS END=236924418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 236924419 . C . PASS END=236924423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:21,0 chr1 236924424 . A . PASS END=236924438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:17,0 chr1 236924439 . T . PASS END=236924439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 236924440 . C . PASS END=236924443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 236924444 . G . PASS END=236924444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 236924445 . C . PASS END=236924445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 236924446 . C . PASS END=236924463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 236924464 . T . PASS END=236924468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr1 236924469 . A . PASS END=236924473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 236925760 . G . PASS END=236925795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:26,0 chr1 236925796 . G . PASS END=236925806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:29,0 chr1 236925807 . A . PASS END=236925843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:38,0 chr1 236925844 . G A, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.248;ReadPosRankSum=2.061;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,20,0:0.526,0.000:38:9,14,0:9,6,0:48:85,0,50,699,644,1343:255,0,255:17,0:5.0000e+01,6.6269e-05,5.2776e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,13,7:10,8,11,9 chr1 236925845 . G . PASS END=236925881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1418:0,110,255:40,0 chr1 236925882 . C . PASS END=236925919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,120,1800:0,125,255:40,0 chr1 236925922 . C . PASS END=236925922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 236925929 . T . PASS END=236925929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 236925962 . A . PASS END=236925962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:54:0,120,1800:0,129,255:40,0 chr1 236926025 . A . PASS END=236926025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,145,255:40,0 chr1 236926047 . G . PASS END=236926047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 236926076 . C . PASS END=236926076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,117,1755:0,144,255:39,0 chr1 236926205 . T . PASS END=236926205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 236926315 . G . PASS END=236926315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 236926407 . A . PASS END=236926407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 236926470 . G . PASS END=236926470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr1 236926560 . C . PASS END=236926560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 236926767 . C . PASS END=236926767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 236926805 . T . PASS END=236926805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 236926818 . A . PASS END=236926818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 236926830 . A . PASS END=236926830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 236926898 . C . PASS END=236926898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 236926920 . T . PASS END=236926920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 236927016 . G . PASS END=236927016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1673:0,119,255:39,0 chr1 236927028 . C . PASS END=236927028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1621:0,119,255:40,0 chr1 236927035 . G . PASS END=236927035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1667:0,119,255:40,0 chr1 236927172 . G . PASS END=236927172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 236927178 . G . PASS END=236927178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 236927192 . C . PASS END=236927192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr1 236927207 . T . PASS END=236927207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 236927220 . T . PASS END=236927220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 236927564 . C . PASS END=236927564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1482:0,87,255:38,2 chr1 236927570 . G . PASS END=236927570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 236927622 . C . PASS END=236927623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,120,1800:0,129,255:40,0 chr1 236927888 . C . PASS END=236927888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr1 236958621 . A . PASS END=236958621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:9,0 chr1 236958622 . T . PASS END=236958643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,368:0,36,255:13,0 chr1 236958644 . A . PASS END=236958648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 236958649 . A . PASS END=236958649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 236958650 . C . PASS END=236958650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,338:0,25,255:12,0 chr1 236958651 . G . PASS END=236958651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 236958652 . T . PASS END=236958652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 236958653 . C . PASS END=236958653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,413:0,28,255:13,0 chr1 236958654 . G . PASS END=236958654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 236958655 . T . PASS END=236958659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 236958660 . C . PASS END=236958660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 236958661 . T . PASS END=236958662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr1 236958663 . T . PASS END=236958663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr1 236958664 . G . PASS END=236958664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:15,0 chr1 236958665 . C . PASS END=236958665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr1 236958666 . C . PASS END=236958743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:19,0 chr1 236958744 . C . PASS END=236958745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 236958746 . A . PASS END=236958771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,613:0,40,255:19,0 chr1 236958772 . A . PASS END=236958773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr1 236958774 . G . PASS END=236958774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 236958775 . C . PASS END=236958778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 236958779 . T . PASS END=236958808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,653:0,43,255:19,0 chr1 236958809 . G . PASS END=236958811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 236958812 . A . PASS END=236958813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 236958814 . G . PASS END=236958841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,955:0,75,255:26,0 chr1 236958842 . C . PASS END=236958845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 236958846 . A . PASS END=236958846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 236958847 . G . PASS END=236958871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr1 236958872 . G . PASS END=236958874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 236958875 . G . PASS END=236958881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 236958882 . A . PASS END=236958882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr1 236958883 . A . PASS END=236958884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 236958885 . A . PASS END=236958885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr1 236958886 . C . PASS END=236958895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 236958896 . G . PASS END=236958896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 236958897 . T . PASS END=236958915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1180:0,93,255:32,0 chr1 236958916 . G . PASS END=236958916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:29,0 chr1 236958917 . C . PASS END=236958925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr1 236958926 . G . PASS END=236958926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 236958927 . T . PASS END=236958927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 236958928 . G . PASS END=236958928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 236958929 . G . PASS END=236958933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1042:0,93,255:31,0 chr1 236958934 . T . PASS END=236958934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:30,0 chr1 236958935 . G . PASS END=236958942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1202:0,93,255:32,0 chr1 236958943 . T . PASS END=236958943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1129:0,66,255:29,0 chr1 236958944 . C . PASS END=236958971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1172:0,83,255:31,0 chr1 236958972 . G . PASS END=236958972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 236958973 . C . PASS END=236958979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr1 236958980 . T . PASS END=236958980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr1 236958981 . G . PASS END=236958986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 236958987 . G . PASS END=236958987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 236958988 . G . PASS END=236958997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 236958998 . G . PASS END=236958998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 236958999 . A . PASS END=236959000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 236959001 . A . PASS END=236959001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 236959002 . A . PASS END=236959002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 236959003 . C . PASS END=236959004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 236959005 . T . PASS END=236959005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:24,0 chr1 236959006 . G . PASS END=236959012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr1 236959013 . G . PASS END=236959013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:20,0 chr1 236959014 . C . PASS END=236959028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:23,0 chr1 236959029 . C . PASS END=236959030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 236959031 . C . PASS END=236959032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 236959033 . A . PASS END=236959034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 236959035 . C . PASS END=236959036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 236959037 . G . PASS END=236959037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 236959047 . C . PASS END=236959047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 236959050 . C . PASS END=236959050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 236966728 . A . PASS END=236966754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:19,0 chr1 236966755 . A . PASS END=236966763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:23,0 chr1 236966764 . C . PASS END=236966764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 236966765 . C . PASS END=236966775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:26,0 chr1 236966776 . A . PASS END=236966782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 236966783 . T . PASS END=236966786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 236966787 . G . PASS END=236966925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1126:0,86,255:40,0 chr1 236966926 . T . PASS END=236966926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:28,0 chr1 236966927 . T . PASS END=236966931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 236966932 . A . PASS END=236966939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1025:0,73,255:26,0 chr1 236966940 . A . PASS END=236966940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:21,0 chr1 236966941 . A . PASS END=236966942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 236969443 . G . PASS END=236969533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,120,1800:0,129,255:40,0 chr1 236972004 . G . PASS END=236972073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,102,1530:0,112,255:40,0 chr1 236972080 . A . PASS END=236972080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:36,0 chr1 236973803 . G . PASS END=236973895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,130,255:40,0 chr1 236973908 . C . PASS END=236973908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,111,1665:0,159,255:37,0 chr1 236976038 . C . PASS END=236976144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:77:0,120,1800:0,215,255:40,0 chr1 236978903 . G . PASS END=236978949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,132,255:40,2 chr1 236978950 . C . PASS END=236978963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,133,255:40,0 chr1 236979749 . A . PASS END=236979843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:49:0,114,1710:0,126,255:40,0 chr1 236987419 . C . PASS END=236987520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,120,1800:0,134,255:40,0 chr1 236988628 . C . PASS END=236988628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr1 236988638 . G . PASS END=236988700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,137,255:40,0 chr1 236990118 . C . PASS END=236990118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr1 236990129 . G . PASS END=236990196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:69:0,120,1800:0,196,255:40,0 chr1 236992489 . G . PASS END=236992568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:42:0,114,1670:0,114,255:40,0 chr1 236992574 . T . PASS END=236992574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 236995266 . G . PASS END=236995378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,105,1521:0,105,255:40,0 chr1 236998847 . G . PASS END=236998951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:31:0,87,1305:0,93,255:40,0 chr1 236998952 . T . PASS END=236998953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 236998954 . C . PASS END=236998969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 236998970 . G . PASS END=236998985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 236998986 . A . PASS END=236998987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:54:26:0,54,810:0,65,255:19,0 chr1 237001714 . G . PASS END=237001717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:34,0 chr1 237001718 . C . PASS END=237001718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr1 237001719 . T . PASS END=237001899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:34:0,80,1124:0,80,255:40,0 chr1 237013644 . G . PASS END=237013823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:59:0,120,1800:0,139,255:40,0 chr1 237013838 . G . PASS END=237013838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,111,1665:0,147,255:37,0 chr1 237015821 . G . PASS END=237015937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:33:0,87,1220:0,89,255:40,0 chr1 237016248 . T . PASS END=237016256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr1 237016257 . G . PASS END=237016364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:31:0,90,1274:0,93,255:40,0 chr1 237016365 . G . PASS END=237016365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1473:0,79,255:38,0 chr1 237016366 . A . PASS END=237016369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1421:0,82,255:39,0 chr1 237016370 . G . PASS END=237016370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1343:0,73,255:31,0 chr1 237016371 . C . PASS END=237016371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,102,1530:0,123,255:34,0 chr1 237016372 . T . PASS END=237016372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1299:0,67,255:32,0 chr1 237016373 . C . PASS END=237016374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1459:0,84,255:34,0 chr1 237016375 . T . PASS END=237016375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1305:0,68,255:32,0 chr1 237016376 . A . PASS END=237016378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1405:0,81,255:34,0 chr1 237016379 . T . PASS END=237016379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:33,0 chr1 237016380 . T . PASS END=237016380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1070:0,30,255:31,0 chr1 237016381 . A . PASS END=237016383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 237016384 . C . PASS END=237016386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:33,0 chr1 237016387 . A . PASS END=237016387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1135:0,53,255:28,0 chr1 237016388 . G . PASS END=237016388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:29,0 chr1 237023127 . A . PASS END=237023127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 237023133 . A . PASS END=237023222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,110,1535:0,110,255:40,0 chr1 237024413 . T . PASS END=237024413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:52:0,120,1800:0,123,255:40,2 chr1 237024425 . G . PASS END=237024449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,114,1661:0,114,255:40,0 chr1 237024450 . A . PASS END=237024473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:84:88:0,84,1800:0,84,255:40,7 chr1 237024474 . A . PASS END=237024474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,7:100:49:100:0,49,3284:0,49,255:40,5 chr1 237024475 . A . PASS END=237024577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:73:0,120,1800:0,175,255:40,0 chr1 237025536 . G . PASS END=237025643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,120,1800:0,126,255:40,0 chr1 237025646 . A . PASS END=237025646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 237026753 . G . PASS END=237026768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1094:0,87,255:31,0 chr1 237026769 . A . PASS END=237026769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:29,0 chr1 237026770 . C . PASS END=237026855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:35:0,92,1310:0,92,255:40,0 chr1 237026862 . A . PASS END=237026862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr1 237028564 . G T, 46.94 PASS DP=69;MQ=250.00;MQRankSum=7.008;ReadPosRankSum=4.405;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,28,0:0.406,0.000:69:19,12,0:22,16,0:46:82,0,50,993,1459,2452:255,0,255:40,0:4.6939e+01,1.0950e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,15,19,9:22,19,17,11 chr1 237037073 . A . PASS END=237037140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,167,255:40,0 chr1 237037143 . A . PASS END=237037143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:75:0,120,1800:0,209,255:40,0 chr1 237038025 . G . PASS END=237038025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1030:0,82,255:31,0 chr1 237038026 . A . PASS END=237038026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1042:0,60,255:31,0 chr1 237038027 . T . PASS END=237038027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 237038028 . A . PASS END=237038029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:43:33:0,43,981:0,43,255:35,0 chr1 237038030 . A . PASS END=237038030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 237038031 . A . PASS END=237038031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1275:0,75,255:36,0 chr1 237038032 . T . PASS END=237038032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1300:0,81,255:35,0 chr1 237038033 . T . PASS END=237038033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1316:0,67,255:35,0 chr1 237038034 . G . PASS END=237038034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 237038035 . G . PASS END=237038036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1349:0,62,255:37,0 chr1 237038037 . C . PASS END=237038055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:39:0,101,1412:0,101,255:40,0 chr1 237038056 . C . PASS END=237038123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,3:76:99:66:0,120,1800:0,130,255:40,0 chr1 237038124 . A . PASS END=237038146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,167,255:40,0 chr1 237044055 . A . PASS END=237044136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1260:0,84,255:40,0 chr1 237048421 . T . PASS END=237048462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,181,255:40,0 chr1 237048463 . G . PASS END=237048499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,186,255:40,0 chr1 237048500 . A G, 50.00 PASS DP=71;MQ=249.52;MQRankSum=6.843;ReadPosRankSum=3.367;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,37,0:0.521,0.000:71:16,18,0:18,19,0:48:85,0,50,1307,1216,2523:255,0,255:29,0:5.0000e+01,6.6010e-05,5.2845e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,15,16,21:15,19,17,20 chr1 237048501 . C . PASS END=237048519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,138,255:40,0 chr1 237049592 . G . PASS END=237049667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,168,255:40,0 chr1 237052481 . T . PASS END=237052636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:44:0,90,1350:0,105,255:40,0 chr1 237054429 . A . PASS END=237054429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 237054433 . G . PASS END=237054449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,693:0,63,255:24,0 chr1 237054450 . G . PASS END=237054549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1064:0,90,255:40,0 chr1 237054550 . A . PASS END=237054559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,77,255:26,0 chr1 237054560 . C . PASS END=237054560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 237054561 . C . PASS END=237054574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:26,0 chr1 237054575 . T . PASS END=237054575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:21,0 chr1 237054576 . G . PASS END=237054577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr1 237054578 . T . PASS END=237054578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 237054579 . G . PASS END=237054587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 237054588 . G . PASS END=237054588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 237054589 . C . PASS END=237054593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr1 237054594 . G . PASS END=237054629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,635:0,40,255:19,0 chr1 237057657 . G . PASS END=237057659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 237057660 . G . PASS END=237057685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:29:0,83,935:0,83,255:34,0 chr1 237057686 . A . PASS END=237057686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:34,0 chr1 237057687 . T . PASS END=237057807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:32:0,80,977:0,80,255:40,0 chr1 237057808 . A . PASS END=237057825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,922:0,62,255:26,0 chr1 237057826 . T . PASS END=237057827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,892:0,36,255:21,0 chr1 237057828 . G . PASS END=237057833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:22,0 chr1 237057834 . G . PASS END=237057834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr1 237057835 . C . PASS END=237057835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:21,0 chr1 237057836 . G . PASS END=237057837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:30:23:0,30,814:0,30,255:21,0 chr1 237057838 . T . PASS END=237057838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr1 237057839 . G . PASS END=237057843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,784:0,30,255:23,0 chr1 237057844 . A . PASS END=237057844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 237057845 . C . PASS END=237057845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 237057846 . C . PASS END=237057846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:23,0 chr1 237057847 . G . PASS END=237057847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,792:0,20,255:22,0 chr1 237057848 . G . PASS END=237057848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 237057849 . C . PASS END=237057849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,784:0,20,255:22,0 chr1 237057850 . T . PASS END=237057850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:22,0 chr1 237057851 . G . PASS END=237057851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 237057852 . G . PASS END=237057852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:23,0 chr1 237057853 . C . PASS END=237057853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 237057854 . A . PASS END=237057854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:19,0 chr1 237057855 . G . PASS END=237057855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 237057856 . A . PASS END=237057856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:19,0 chr1 237057857 . G . PASS END=237057857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,775:0,17,255:18,0 chr1 237058658 . G . PASS END=237058675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,841:0,72,255:25,0 chr1 237058676 . C . PASS END=237058676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 237058677 . A . PASS END=237058677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr1 237058678 . T . PASS END=237058678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 237058679 . G . PASS END=237058684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,886:0,75,255:25,0 chr1 237058685 . G . PASS END=237058685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:23,0 chr1 237058686 . T . PASS END=237058701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,886:0,61,255:25,0 chr1 237058702 . G . PASS END=237058706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 237058707 . A . PASS END=237058707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 237058708 . C . PASS END=237058726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 237058727 . G . PASS END=237058727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr1 237058728 . A . PASS END=237058730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 237058731 . T . PASS END=237058744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,970:0,67,255:26,0 chr1 237058745 . A . PASS END=237058745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:23,0 chr1 237058746 . G . PASS END=237058777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:25,0 chr1 237058778 . G . PASS END=237058778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr1 237058779 . G . PASS END=237058790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,953:0,75,255:26,0 chr1 237058791 . A . PASS END=237058804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:25,0 chr1 237058805 . G . PASS END=237058805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 237058806 . A . PASS END=237058815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 237058816 . C . PASS END=237058816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr1 237058817 . A . PASS END=237058827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:22,0 chr1 237058828 . C T, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=3.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,14,0:0.636,0.000:22:4,7,0:4,7,0:47:85,0,46,501,270,771:255,0,228:8,0:5.0000e+01,9.3449e-05,4.9395e+01,4.5000e+02,3.0475e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,7,3,11:3,5,8,6 chr1 237058829 . G . PASS END=237058836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr1 237058837 . C . PASS END=237058840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 237058841 . C . PASS END=237058850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:20:0,30,450:0,44,255:11,0 chr1 237060306 . G . PASS END=237060395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,107,1466:0,107,255:40,0 chr1 237060396 . T . PASS END=237060418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,111,1621:0,119,255:40,0 chr1 237060858 . G . PASS END=237060895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,184,255:40,0 chr1 237060896 . T . PASS END=237060941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:81:80:0,81,1215:0,171,255:40,0 chr1 237060942 . T . PASS END=237060944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:72:76:0,72,1080:0,181,255:24,0 chr1 237060945 . CTT CT,C, 50.00 PASS DP=76;MQ=249.11;MQRankSum=6.666;ReadPosRankSum=0.853;FractionInformativeReads=0.934;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,30,15,0:0.423,0.211,0.000:71:13,12,8,0:13,18,7,0:29:59,0,26,73,67,120,220,220,220,220:255,0,255:21,66:5.0005e+01,4.9673e-03,2.9458e+01,7.2769e+01,7.5720e+01,1.2277e+02,2.4553e+02,2.5453e+02,2.5453e+02,2.4854e+02:0.00,9.00,12.01,9.00,18.00,12.01,34.77,43.77,43.77,37.78:13,13,26,19:14,12,21,24 chr1 237061000 . T . PASS END=237061000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:70:0,120,1800:0,177,255:40,0 chr1 237061046 . G . PASS END=237061046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 237061113 . C . PASS END=237061113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr1 237061145 . T . PASS END=237061145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 237061152 . C . PASS END=237061152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 237061156 . C . PASS END=237061156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr1 237061258 . T . PASS END=237061258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 237061262 . T . PASS END=237061262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 237061300 . G . PASS END=237061300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 237061411 . A . PASS END=237061411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr1 237061429 . G . PASS END=237061429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 237061516 . C . PASS END=237061516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 237062031 . G . PASS END=237062031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 237062042 . T . PASS END=237062042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 237062049 . G . PASS END=237062049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 237062091 . T . PASS END=237062091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr1 237062094 . G . PASS END=237062094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr1 237062196 . C . PASS END=237062196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 237062345 . A . PASS END=237062345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 237062529 . C . PASS END=237062529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 237062601 . C . PASS END=237062601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 237062653 . C . PASS END=237062653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr1 237062676 . T . PASS END=237062676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1311:0,95,255:34,0 chr1 237062729 . A . PASS END=237062730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 237062753 . C . PASS END=237062753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:43:0,91,1590:0,91,255:38,0 chr1 237062808 . T . PASS END=237062808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 237063039 . G . PASS END=237063039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr1 237063141 . C . PASS END=237063141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 237063220 . G . PASS END=237063220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 237063287 . A . PASS END=237063287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 237063308 . C . PASS END=237063308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 237063470 . G . PASS END=237063470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 237063670 . A . PASS END=237063670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:76:0,120,1800:0,194,255:40,0 chr1 237063709 . T TA, 50.00 PASS DP=71;MQ=250.00;MQRankSum=7.189;ReadPosRankSum=0.070;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,35,0:0.500,0.000:70:18,19,0:17,16,0:47:69,0,46,169,169,169:255,0,255:5,52:5.0000e+01,9.7073e-05,4.9078e+01,1.8477e+02,2.0377e+02,1.8778e+02:0.00,19.00,22.01,34.77,53.77,37.78:10,25,19,16:19,16,19,16 chr1 237063938 . A . PASS END=237063938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 237064110 . C . PASS END=237064110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr1 237064170 . A . PASS END=237064170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr1 237064174 . G . PASS END=237064174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,99,1485:0,101,255:32,0 chr1 237064242 . G . PASS END=237064242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 237064264 . G . PASS END=237064264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1434:0,111,255:37,0 chr1 237064333 . A . PASS END=237064333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1265:0,97,255:35,0 chr1 237064372 . G . PASS END=237064372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 237064390 . G . PASS END=237064390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 237064498 . A . PASS END=237064498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:31,0 chr1 237064604 . G . PASS END=237064604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 237064621 . T . PASS END=237064621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 237064752 . A . PASS END=237064752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 237064763 . A . PASS END=237064763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 237064767 . C . PASS END=237064767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 237064932 . G . PASS END=237064932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 237064983 . C . PASS END=237064983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr1 237065058 . A . PASS END=237065058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 237065089 . C . PASS END=237065089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 237065092 . A . PASS END=237065092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 237065236 . G . PASS END=237065236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 237065291 . A . PASS END=237065291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 237065353 . G . PASS END=237065353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1318:0,102,255:34,0 chr1 237065367 . C . PASS END=237065367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 237065502 . A . PASS END=237065502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 237065611 . C . PASS END=237065611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:24,0 chr1 237065668 . G . PASS END=237065668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr1 237065691 . G . PASS END=237065691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr1 237066056 . A . PASS END=237066056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 237066097 . T . PASS END=237066097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1176:0,102,255:34,0 chr1 237066137 . A . PASS END=237066137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr1 237066148 . A . PASS END=237066148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 237066192 . A . PASS END=237066192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 237066199 . T . PASS END=237066199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 237066241 . T . PASS END=237066241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 237066288 . G . PASS END=237066288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 237066296 . C . PASS END=237066296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,164,255:40,0 chr1 237066318 . C . PASS END=237066318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr1 237066435 . T . PASS END=237066435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 237066481 . T . PASS END=237066481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 237066583 . A . PASS END=237066583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr1 237066828 . A . PASS END=237066828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 237066836 . A . PASS END=237066836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 237066900 . A . PASS END=237066900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 237066921 . A . PASS END=237066921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr1 237067025 . C . PASS END=237067025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 237067045 . A . PASS END=237067045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1410:0,111,255:37,0 chr1 237067187 . A . PASS END=237067187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 237167487 . T . PASS END=237167504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr1 237167505 . C . PASS END=237167517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 237167518 . C . PASS END=237167518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 237167519 . C . PASS END=237167542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,693:0,63,255:26,0 chr1 237167543 . A . PASS END=237167543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 237167544 . C . PASS END=237167545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 237167546 . T . PASS END=237167550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 237167551 . C . PASS END=237167552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:29:0,76,1072:0,76,255:26,0 chr1 237167553 . G . PASS END=237167553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 237167554 . C . PASS END=237167554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr1 237167555 . C . PASS END=237167642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1147:0,84,255:40,0 chr1 237167643 . T . PASS END=237167643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 237167644 . C . PASS END=237167672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:31:0,81,1260:0,81,255:37,0 chr1 237205795 . C . PASS END=237205795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr1 237205802 . C . PASS END=237205802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 237205807 . A . PASS END=237205807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 237205815 . C . PASS END=237205815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 237205820 . C . PASS END=237205820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr1 237205822 . A . PASS END=237205845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,551:0,45,255:18,0 chr1 237205846 . G . PASS END=237205848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 237205849 . G . PASS END=237205869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,676:0,57,255:19,0 chr1 237433797 . G . PASS END=237433916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:37:0,81,1346:0,81,255:40,0 chr1 237494176 . A . PASS END=237494176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 237494178 . A . PASS END=237494183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1027:0,84,255:29,0 chr1 237494184 . C . PASS END=237494184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr1 237494185 . C . PASS END=237494282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1197:0,86,255:40,0 chr1 237519262 . C . PASS END=237519262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr1 237519265 . C . PASS END=237519285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:80:0,120,1800:0,213,255:40,0 chr1 237519288 . A . PASS END=237519288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:81:0,120,1800:0,227,255:40,0 chr1 237519290 . G . PASS END=237519290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr1 237527652 . C . PASS END=237527653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,1:117:99:117:0,120,1800:0,255,255:40,0 chr1 237527658 . A . PASS END=237527672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:118:0,120,1800:0,255,255:40,0 chr1 237532819 . C . PASS END=237532908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:46:0,101,1732:0,101,255:40,0 chr1 237538017 . T . PASS END=237538095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,125,255:40,0 chr1 237538101 . C . PASS END=237538101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr1 237538104 . C . PASS END=237538105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 237538109 . G . PASS END=237538109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 237540613 . A . PASS END=237540613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 237540623 . G . PASS END=237540735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:31:0,82,1127:0,82,255:40,0 chr1 237550567 . G . PASS END=237550567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr1 237550581 . C . PASS END=237550676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:39:0,93,1463:0,93,255:40,0 chr1 237550677 . C . PASS END=237550677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:32,0 chr1 237550678 . A . PASS END=237550680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 237550683 . A . PASS END=237550683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr1 237551387 . G . PASS END=237551413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,99,1391:0,99,255:40,0 chr1 237551414 . G . PASS END=237551483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:40:0,84,1260:0,113,255:40,0 chr1 237580335 . G . PASS END=237580335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr1 237580349 . A . PASS END=237580424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,165,255:40,0 chr1 237580431 . G . PASS END=237580431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr1 237586382 . T . PASS END=237586382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1336:0,111,255:37,0 chr1 237586392 . G . PASS END=237586549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:43:0,87,1305:0,106,255:40,0 chr1 237586551 . G . PASS END=237586551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,95,255:28,0 chr1 237604607 . C . PASS END=237604607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 237604619 . G . PASS END=237604784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:30:0,84,1260:0,90,255:40,0 chr1 237604793 . T . PASS END=237604793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 237608701 . G . PASS END=237608822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:35:0,96,1327:0,96,255:40,0 chr1 237608825 . A . PASS END=237608825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 237617691 . G . PASS END=237617860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:35:0,80,1275:0,80,255:40,0 chr1 237617861 . T . PASS END=237617861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1111:0,75,255:31,0 chr1 237617862 . C . PASS END=237617862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1324:0,92,255:31,0 chr1 237617863 . T . PASS END=237617863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1094:0,58,255:29,0 chr1 237617864 . T . PASS END=237617874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1216:0,83,255:32,0 chr1 237617877 . C . PASS END=237617877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 237617878 . C . PASS END=237617879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1062:0,74,255:26,0 chr1 237619900 . G . PASS END=237619910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,537:0,41,255:19,0 chr1 237619911 . C . PASS END=237619915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:24,0 chr1 237619916 . T . PASS END=237619916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 237619917 . G . PASS END=237619921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,900:0,61,255:25,0 chr1 237619922 . A . PASS END=237620035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1215:0,84,255:40,0 chr1 237620045 . A . PASS END=237620045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 237620048 . A . PASS END=237620048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 237632392 . C . PASS END=237632481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:96:40:0,96,1511:0,96,255:40,0 chr1 237632482 . C . PASS END=237632482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:76:53:0,76,1734:0,76,255:40,0 chr1 237632483 . T . PASS END=237632487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,110,1800:0,110,255:40,0 chr1 237655091 . T . PASS END=237655091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 237655106 . G . PASS END=237655224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,132,255:40,0 chr1 237656242 . T . PASS END=237656242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1221:0,53,255:36,0 chr1 237656254 . G . PASS END=237656256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1398:0,81,255:40,0 chr1 237656257 . C . PASS END=237656257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:38,0 chr1 237656258 . T . PASS END=237656387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:40:0,93,1454:0,93,255:40,0 chr1 237659811 . C . PASS END=237659818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:24,0 chr1 237659819 . C . PASS END=237659820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr1 237659821 . A . PASS END=237659822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,886:0,72,255:26,0 chr1 237659823 . T . PASS END=237659823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,853:0,31,255:24,0 chr1 237659824 . A . PASS END=237659828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:26,0 chr1 237659829 . T . PASS END=237659829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 237659830 . C . PASS END=237659830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 237659831 . T . PASS END=237659985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1016:0,81,255:38,0 chr1 237659986 . T . PASS END=237659989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 237659990 . G . PASS END=237659993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr1 237659994 . A . PASS END=237659994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:29,0 chr1 237659995 . A . PASS END=237659996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr1 237659997 . T . PASS END=237659999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 237660000 . T . PASS END=237660000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,966:0,73,255:26,0 chr1 237660001 . G . PASS END=237660002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 237660003 . T . PASS END=237660006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 237660007 . G . PASS END=237660007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 237660008 . A . PASS END=237660008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 237660009 . T . PASS END=237660011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 237660012 . T . PASS END=237660012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr1 237660013 . C . PASS END=237660015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 237660016 . T . PASS END=237660028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,955:0,67,255:26,0 chr1 237660029 . T . PASS END=237660029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,792:0,41,255:21,0 chr1 237660030 . T . PASS END=237660032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 237660033 . T . PASS END=237660036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,823:0,55,255:19,0 chr1 237660037 . C . PASS END=237660037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:19,0 chr1 237660038 . T . PASS END=237660039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr1 237660040 . C . PASS END=237660040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 237660041 . A . PASS END=237660041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr1 237660042 . T . PASS END=237660048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr1 237660049 . T . PASS END=237660051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:21:0,42,630:0,47,255:14,0 chr1 237660052 . G . PASS END=237660052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:13,0 chr1 237660054 . T . PASS END=237660054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr1 237663996 . T . PASS END=237663996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr1 237663999 . T . PASS END=237663999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr1 237664001 . C . PASS END=237664001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 237664011 . G . PASS END=237664018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr1 237664019 . G . PASS END=237664021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1127:0,87,255:31,0 chr1 237664022 . C . PASS END=237664022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr1 237664023 . G . PASS END=237664181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1335:0,84,255:40,0 chr1 237664182 . T . PASS END=237664182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1114:0,77,255:32,0 chr1 237664183 . T . PASS END=237664183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 237664184 . A . PASS END=237664184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:33,0 chr1 237664185 . G . PASS END=237664203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,85,255:34,0 chr1 237666589 . A . PASS END=237666804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,101,1418:0,101,255:40,0 chr1 237666805 . G . PASS END=237666805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr1 237666809 . C . PASS END=237666809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 237666813 . G . PASS END=237666813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr1 237670010 . A . PASS END=237670102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,107,1391:0,107,255:40,0 chr1 237670103 . C . PASS END=237670114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,114,1710:0,141,255:40,0 chr1 237670120 . T . PASS END=237670120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 237670133 . T . PASS END=237670133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 237674978 . C . PASS END=237674978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 237674984 . T . PASS END=237674984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr1 237674988 . G . PASS END=237675084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:62:0,120,1800:0,138,255:40,0 chr1 237675085 . C . PASS END=237675091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:69:0,120,1800:0,135,255:40,0 chr1 237693727 . G . PASS END=237693810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:59:0,120,1800:0,169,255:40,0 chr1 237711731 . T . PASS END=237711759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1335:0,107,255:40,0 chr1 237711760 . C . PASS END=237711796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,119,1605:0,119,255:40,0 chr1 237711797 . A G, 191.46 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,21,0:0,27,0:141:229,144,0,329,329,329:255,144,0:0,0:1.9146e+02,1.4146e+02,0.0000e+00,3.2623e+02,3.6100e+02,3.2924e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,31:0,0,24,24 chr1 237711798 . C . PASS END=237711834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,103,1693:0,103,255:40,0 chr1 237711835 . A . PASS END=237711882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1086:0,87,255:40,0 chr1 237711883 . T . PASS END=237711890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,994:0,70,255:26,0 chr1 237711895 . A . PASS END=237711895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 237713830 . G . PASS END=237713830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 237713844 . G . PASS END=237713846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 237713847 . G . PASS END=237713857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:28,0 chr1 237713858 . A . PASS END=237713858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 237713859 . A . PASS END=237713869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr1 237713870 . C . PASS END=237713870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 237713871 . C . PASS END=237713960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1055:0,84,255:40,0 chr1 237713961 . T . PASS END=237713961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:30,0 chr1 237713962 . A . PASS END=237713985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:33,0 chr1 237713986 . A . PASS END=237713991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 237729853 . T . PASS END=237729853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 237729867 . C . PASS END=237729872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr1 237729873 . G . PASS END=237729873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 237729874 . A . PASS END=237729874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 237729875 . G . PASS END=237729878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr1 237729879 . A . PASS END=237729879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 237729880 . A . PASS END=237729882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr1 237729883 . G . PASS END=237729889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 237729890 . G . PASS END=237729892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 237729893 . A . PASS END=237729894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 237729895 . C . PASS END=237729895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 237729896 . G . PASS END=237729902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,917:0,64,255:26,0 chr1 237729903 . G . PASS END=237729905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 237729906 . T . PASS END=237729906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 237729907 . C . PASS END=237730075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,1025:0,84,255:40,0 chr1 237730081 . T . PASS END=237730081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr1 237732445 . G . PASS END=237732619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:37:0,92,1300:0,92,255:40,0 chr1 237732632 . T . PASS END=237732632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr1 237753093 . G . PASS END=237753292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:37:0,81,1215:0,90,255:40,0 chr1 237753293 . C . PASS END=237753301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:36:0,75,1125:0,91,255:25,0 chr1 237753305 . T . PASS END=237753305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 237753931 . G . PASS END=237753931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr1 237753940 . G . PASS END=237753946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,900:0,69,255:25,0 chr1 237753947 . G . PASS END=237753954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1097:0,87,255:31,0 chr1 237753955 . G . PASS END=237753955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr1 237753956 . G . PASS END=237754271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1117:0,82,255:40,0 chr1 237754272 . G . PASS END=237754275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 237754276 . T . PASS END=237754276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:24,0 chr1 237754277 . C . PASS END=237754292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr1 237754299 . A . PASS END=237754299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr1 237755034 . T . PASS END=237755034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1459:0,117,255:39,0 chr1 237755039 . A . PASS END=237755153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:40:0,87,1305:0,107,255:40,0 chr1 237756767 . T . PASS END=237756767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 237756776 . T . PASS END=237756914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:37:0,93,1395:0,111,255:40,0 chr1 237756915 . A . PASS END=237756915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:30,0 chr1 237756916 . A . PASS END=237756921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,95,255:30,0 chr1 237756922 . A . PASS END=237756925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 237756926 . G . PASS END=237756927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr1 237756928 . G . PASS END=237756936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,77,255:25,0 chr1 237757400 . C . PASS END=237757407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,160,255:40,0 chr1 237757408 . T . PASS END=237757429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,153,255:40,0 chr1 237758798 . C . PASS END=237758800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr1 237758801 . C . PASS END=237758803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr1 237758804 . A . PASS END=237758805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 237758806 . G . PASS END=237758806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 237758807 . C . PASS END=237758808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 237758809 . G . PASS END=237758809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr1 237758810 . C . PASS END=237758812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 237758813 . C . PASS END=237758814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 237758815 . G . PASS END=237758815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 237758816 . C . PASS END=237758816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,677:0,27,255:21,0 chr1 237758817 . T . PASS END=237758817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 237758818 . A . PASS END=237758818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr1 237758819 . T . PASS END=237758826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,771:0,61,255:26,0 chr1 237758827 . G . PASS END=237758947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:33:0,88,1090:0,88,255:40,0 chr1 237758948 . A . PASS END=237758957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,83,255:25,0 chr1 237758961 . C . PASS END=237758961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 237758963 . C . PASS END=237758963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 237765325 . G . PASS END=237765411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,191,255:40,0 chr1 237774055 . C . PASS END=237774055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 237774062 . A . PASS END=237774063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,410:0,44,255:15,0 chr1 237774064 . T . PASS END=237774064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 237774065 . G . PASS END=237774065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 237774066 . T . PASS END=237774066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 237774067 . G . PASS END=237774067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 237774068 . A . PASS END=237774068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 237774069 . T . PASS END=237774079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr1 237774080 . G . PASS END=237774080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 237774081 . C . PASS END=237774082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 237774083 . G . PASS END=237774083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 237774084 . G . PASS END=237774088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:18,0 chr1 237774089 . T . PASS END=237774089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 237774090 . T . PASS END=237774094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr1 237774095 . A . PASS END=237774096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr1 237774097 . T . PASS END=237774097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr1 237774098 . G . PASS END=237774098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 237774099 . A . PASS END=237774102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 237774103 . C . PASS END=237774109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,646:0,60,255:20,0 chr1 237774110 . C . PASS END=237774113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr1 237774114 . T . PASS END=237774114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,604:0,5,255:16,0 chr1 237774115 . G . PASS END=237774121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,49,255:18,0 chr1 237774122 . T . PASS END=237774122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,727:0,36,255:16,0 chr1 237774123 . G . PASS END=237774128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:20:0,53,810:0,53,255:21,0 chr1 237774129 . C . PASS END=237774136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:24,0 chr1 237774137 . C . PASS END=237774137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr1 237774138 . A . PASS END=237774146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,917:0,67,255:26,0 chr1 237774147 . T . PASS END=237774147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 237774148 . C . PASS END=237774148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 237774149 . C . PASS END=237774149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr1 237774150 . T . PASS END=237774150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 237774151 . G . PASS END=237774187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,1083:0,85,255:35,0 chr1 237774188 . T . PASS END=237774188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1048:0,55,255:31,0 chr1 237774189 . T . PASS END=237774193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:34,0 chr1 237774194 . G . PASS END=237774194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:31,0 chr1 237774195 . T . PASS END=237774221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1129:0,83,255:35,0 chr1 237774222 . A . PASS END=237774222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:32,0 chr1 237774223 . A . PASS END=237774256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1222:0,86,255:36,0 chr1 237774257 . T . PASS END=237774257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1032:0,66,255:30,0 chr1 237774258 . T . PASS END=237774273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1148:0,83,255:32,0 chr1 237774274 . C . PASS END=237774288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr1 237777339 . A . PASS END=237777339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 237777340 . T . PASS END=237777343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 237777344 . T . PASS END=237777344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:19,0 chr1 237777345 . T . PASS END=237777345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr1 237777346 . G . PASS END=237777346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 237777347 . A . PASS END=237777347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr1 237777348 . C . PASS END=237777348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 237777349 . A . PASS END=237777349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr1 237777350 . T . PASS END=237777359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:24:0,67,925:0,67,255:27,0 chr1 237777360 . G . PASS END=237777365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr1 237777366 . G . PASS END=237777366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 237777367 . C . PASS END=237777386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr1 237777387 . T . PASS END=237777387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 237777388 . C . PASS END=237777505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1180:0,85,255:38,0 chr1 237777506 . A . PASS END=237777506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:30,0 chr1 237777507 . C . PASS END=237777962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:34:0,85,1205:0,85,255:40,0 chr1 237777963 . G . PASS END=237777963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr1 237777964 . A . PASS END=237778092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1293:0,81,255:40,0 chr1 237778093 . C . PASS END=237778114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:71:27:0,71,1016:0,71,255:26,0 chr1 237778115 . T . PASS END=237778115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:25,0 chr1 237778116 . G . PASS END=237778138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,909:0,62,255:26,0 chr1 237778139 . T . PASS END=237778139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:19,0 chr1 237778140 . G . PASS END=237778142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 237778143 . G . PASS END=237778143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 237780583 . T . PASS END=237780583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 237780586 . A . PASS END=237780588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 237780589 . T . PASS END=237780589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 237780590 . G . PASS END=237780590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 237780591 . C . PASS END=237780597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 237780598 . C . PASS END=237780599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 237780600 . T . PASS END=237780600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 237780601 . C . PASS END=237780779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1141:0,89,255:40,0 chr1 237780780 . A . PASS END=237780784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,83,255:26,0 chr1 237780785 . A . PASS END=237780785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:23,0 chr1 237780786 . G . PASS END=237780786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,70,255:23,0 chr1 237780789 . A . PASS END=237780789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 237780795 . A . PASS END=237780795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 237787053 . T . PASS END=237787053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 237787065 . A . PASS END=237787170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,120,1800:0,143,255:40,0 chr1 237787175 . G . PASS END=237787175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 237788957 . C . PASS END=237788957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 237788961 . G . PASS END=237788968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr1 237788969 . C . PASS END=237789093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1215:0,87,255:40,0 chr1 237789094 . C . PASS END=237789094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,2 chr1 237789095 . A . PASS END=237789095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1365:0,51,255:36,2 chr1 237789096 . A . PASS END=237789096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1268:0,62,255:36,0 chr1 237789097 . A . PASS END=237789104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1418:0,101,255:39,0 chr1 237791100 . T . PASS END=237791100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 237791107 . C . PASS END=237791108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr1 237791109 . A . PASS END=237791109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 237791110 . C . PASS END=237791115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 237791116 . A . PASS END=237791116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 237791117 . G . PASS END=237791117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 237791118 . C . PASS END=237791118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 237791119 . A . PASS END=237791138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,930:0,62,255:26,0 chr1 237791139 . G . PASS END=237791141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:29,0 chr1 237791142 . C . PASS END=237791142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr1 237791143 . G . PASS END=237791143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr1 237791144 . A . PASS END=237791144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 237791145 . T . PASS END=237791145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr1 237791146 . G . PASS END=237791146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:28,0 chr1 237791147 . G . PASS END=237791154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1064:0,80,255:32,0 chr1 237791155 . A . PASS END=237791155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr1 237791156 . G . PASS END=237791369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:31:0,81,1215:0,86,255:40,0 chr1 237791370 . C . PASS END=237791380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1047:0,71,255:25,0 chr1 237791386 . T . PASS END=237791386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 237794727 . G . PASS END=237794841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,99,1391:0,106,255:40,0 chr1 237796878 . G . PASS END=237797010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:37:0,84,1260:0,98,255:40,0 chr1 237797023 . C . PASS END=237797023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr1 237798177 . T . PASS END=237798177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1421:0,117,255:39,0 chr1 237798186 . T . PASS END=237798186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 237798188 . G . PASS END=237798291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:87:41:0,87,1454:0,87,255:40,0 chr1 237798292 . G . PASS END=237798292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:36,0 chr1 237798297 . G . PASS END=237798297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1380:0,98,255:33,0 chr1 237801652 . T . PASS END=237801652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr1 237801653 . G . PASS END=237801653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr1 237801654 . C . PASS END=237801654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 237801657 . G . PASS END=237801658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1124:0,87,255:31,0 chr1 237801659 . A . PASS END=237801659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 237801660 . G . PASS END=237801732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:33:0,89,1063:0,89,255:40,0 chr1 237801733 . G . PASS END=237801769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:35:0,91,1213:0,91,255:40,0 chr1 237801770 . T C, 150.96 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,13,0:0,22,0:101:189,104,0,1261,104,1261:255,105,0:0,0:1.5096e+02,1.0096e+02,0.0000e+00,4.5000e+02,1.3573e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,18,17 chr1 237801771 . A . PASS END=237801789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1077:0,88,255:35,0 chr1 237801790 . A . PASS END=237801792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,77,255:26,0 chr1 237802315 . G . PASS END=237802315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 237802316 . G . PASS END=237802334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr1 237802335 . G . PASS END=237802335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 237802336 . C . PASS END=237802344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,809:0,61,255:26,0 chr1 237802345 . T . PASS END=237802351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr1 237802352 . A . PASS END=237802352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:26,0 chr1 237802353 . T . PASS END=237802361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:29,0 chr1 237802362 . C . PASS END=237802363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:29,0 chr1 237802364 . G . PASS END=237802364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr1 237802365 . A . PASS END=237802365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr1 237802366 . G . PASS END=237802414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:30:0,85,1101:0,85,255:34,0 chr1 237802415 . T . PASS END=237802415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,932:0,73,255:29,0 chr1 237802416 . C . PASS END=237802436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1141:0,83,255:31,0 chr1 237802437 . A . PASS END=237802437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 237802438 . T . PASS END=237802448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,971:0,84,255:28,0 chr1 237802449 . G . PASS END=237802449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 237802450 . A . PASS END=237802450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:23,0 chr1 237802451 . G . PASS END=237802459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,68,255:23,0 chr1 237802460 . C . PASS END=237802460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 237802461 . C . PASS END=237802461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 237802462 . G . PASS END=237802462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr1 237802463 . A . PASS END=237802472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 237802473 . T . PASS END=237802501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr1 237802505 . G . PASS END=237802505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 237804197 . T . PASS END=237804302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:37:0,95,1357:0,95,255:40,0 chr1 237804307 . G . PASS END=237804307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 237806627 . T . PASS END=237806747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,111,1529:0,113,255:40,0 chr1 237811744 . A . PASS END=237811858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:35:0,94,1215:0,94,255:40,0 chr1 237811859 . T . PASS END=237811859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1373:0,62,255:33,0 chr1 237811860 . C . PASS END=237811863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,108,1620:0,114,255:36,0 chr1 237811864 . T . PASS END=237811864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:34,0 chr1 237811865 . T . PASS END=237811891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:36,0 chr1 237811892 . G . PASS END=237811911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr1 237811912 . C . PASS END=237811912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:24,0 chr1 237811913 . G . PASS END=237811913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 237813169 . T . PASS END=237813169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr1 237813177 . G . PASS END=237813181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,978:0,68,255:28,0 chr1 237813182 . T . PASS END=237813391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:29:0,84,1056:0,87,255:40,0 chr1 237813392 . T . PASS END=237813396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:34:0,78,1170:0,86,255:26,0 chr1 237813397 . G . PASS END=237813397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 237814711 . A . PASS END=237814745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:72:0,120,1800:0,212,255:40,0 chr1 237814746 . G . PASS END=237814782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,215,255:40,0 chr1 237814783 . C T, 46.12 PASS DP=76;MQ=250.00;MQRankSum=7.327;ReadPosRankSum=6.052;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,30,0:0.395,0.000:76:26,14,0:20,16,0:45:81,0,50,1073,1645,2718:255,0,255:40,0:4.6118e+01,1.2788e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,26,14,16:20,26,14,16 chr1 237814784 . G . PASS END=237814801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,211,255:40,0 chr1 237817574 . C . PASS END=237817714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:41:0,90,1449:0,90,255:40,0 chr1 237819120 . G . PASS END=237819128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:17,0 chr1 237819129 . A . PASS END=237819129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 237819130 . C . PASS END=237819136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 237819137 . T . PASS END=237819142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 237819143 . A . PASS END=237819143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 237819144 . A . PASS END=237819150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:17:0,51,582:0,51,255:19,0 chr1 237819151 . C . PASS END=237819156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:26,0 chr1 237819157 . T . PASS END=237819333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:30:0,81,1215:0,90,255:40,0 chr1 237821244 . T . PASS END=237821323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:78:0,120,1800:0,235,255:40,0 chr1 237821337 . A . PASS END=237821337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,181,255:40,0 chr1 237823274 . C . PASS END=237823274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,206,255:40,0 chr1 237823281 . T . PASS END=237823282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 237823285 . T . PASS END=237823374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:50:0,120,1800:0,126,255:40,0 chr1 237823380 . G . PASS END=237823380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,117,1755:0,141,255:39,0 chr1 237824110 . G . PASS END=237824218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:41:0,84,1260:0,115,255:40,0 chr1 237824219 . G . PASS END=237824228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:32:0,72,1080:0,96,255:26,0 chr1 237824229 . T . PASS END=237824229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:25,0 chr1 237824230 . A . PASS END=237824230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 237824231 . T . PASS END=237824235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 237824236 . C . PASS END=237824239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 237824240 . C . PASS END=237824247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:23,0 chr1 237829809 . T . PASS END=237829809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr1 237829812 . G . PASS END=237829889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:39:0,99,1485:0,117,255:40,0 chr1 237831176 . A . PASS END=237831176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr1 237831183 . G . PASS END=237831258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:73:0,120,1800:0,202,255:40,0 chr1 237831262 . A . PASS END=237831262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 237837392 . T . PASS END=237837393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:56:0,120,1800:0,152,255:40,0 chr1 237837396 . G . PASS END=237837519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:47:0,120,1800:0,141,255:40,0 chr1 237837525 . A . PASS END=237837525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr1 237838031 . A . PASS END=237838146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:44:0,99,1460:0,99,255:40,0 chr1 237841339 . A . PASS END=237841339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr1 237841348 . A . PASS END=237841352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,227,255:40,0 chr1 237841353 . G . PASS END=237841389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:81:0,120,1800:0,231,255:40,0 chr1 237841390 . A G, 49.20 PASS DP=88;MQ=250.00;MQRankSum=8.041;ReadPosRankSum=4.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,40,0:0.455,0.000:88:22,20,0:26,20,0:48:84,0,50,1372,1717,3089:255,0,255:40,0:4.9205e+01,7.3776e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,25,12,28:27,21,20,20 chr1 237841391 . A . PASS END=237841412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:84:0,120,1800:0,235,255:40,0 chr1 237843747 . T . PASS END=237843747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr1 237843756 . G . PASS END=237843877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:36:0,108,1372:0,108,255:40,0 chr1 237850755 . C . PASS END=237850804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:55:0,119,1800:0,119,255:40,0 chr1 237850814 . C . PASS END=237850814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 237850816 . C . PASS END=237850816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr1 237862258 . T . PASS END=237862258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr1 237862265 . G . PASS END=237862325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:90:0,120,1800:0,255,255:40,0 chr1 237862327 . T . PASS END=237862327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:90:0,120,1800:0,255,255:40,0 chr1 237863519 . T . PASS END=237863519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr1 237863522 . T . PASS END=237863522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr1 237863527 . A . PASS END=237863527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 237863529 . G . PASS END=237863544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,476:0,42,255:19,0 chr1 237863545 . G . PASS END=237863555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,850:0,72,255:26,0 chr1 237863556 . T . PASS END=237863563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:29,0 chr1 237863564 . G . PASS END=237863564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,0 chr1 237863565 . T . PASS END=237863578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:31,0 chr1 237863579 . T . PASS END=237863579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr1 237863580 . T . PASS END=237863610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1095:0,93,255:33,0 chr1 237863611 . A . PASS END=237863611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,975:0,41,255:30,0 chr1 237863612 . C . PASS END=237863680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:31:0,83,1180:0,83,255:40,0 chr1 237863681 . T . PASS END=237863717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:34:0,96,1440:0,102,255:37,0 chr1 237863718 . T G, 151.40 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,16,0:0,19,0:101:189,104,0,1281,104,1281:255,105,0:0,0:1.5140e+02,1.0140e+02,0.0000e+00,4.5000e+02,1.3617e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,14:0,0,20,15 chr1 237863719 . T . PASS END=237863745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1180:0,85,255:33,0 chr1 237863746 . C . PASS END=237863751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 237863752 . G . PASS END=237863754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 237863755 . G . PASS END=237863767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,60,255:25,0 chr1 237863770 . A . PASS END=237863771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr1 237865278 . T . PASS END=237865359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:46:0,108,1620:0,122,255:40,0 chr1 237868510 . T . PASS END=237868510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 237868513 . G . PASS END=237868643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:35:0,92,1395:0,92,255:40,0 chr1 237870241 . T . PASS END=237870241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 237870249 . C . PASS END=237870249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 237870250 . T . PASS END=237870252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 237870253 . C . PASS END=237870263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 237870264 . C . PASS END=237870519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1062:0,84,255:40,0 chr1 237870520 . A . PASS END=237870520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:32,0 chr1 237870521 . T . PASS END=237870547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1156:0,83,255:35,0 chr1 237870548 . G . PASS END=237870548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:28,0 chr1 237870549 . C . PASS END=237870556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:30,0 chr1 237870557 . A . PASS END=237870561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:29:0,71,1039:0,71,255:25,0 chr1 237870562 . G . PASS END=237870562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:24,0 chr1 237870563 . C . PASS END=237870569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:25,0 chr1 237872158 . T . PASS END=237872377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:30:0,84,1260:0,90,255:40,0 chr1 237872378 . T . PASS END=237872386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr1 237872387 . G . PASS END=237872389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:26:0,51,765:0,78,255:17,0 chr1 237872390 . C . PASS END=237872399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:30:18:0,30,450:0,54,255:11,0 chr1 237872401 . A . PASS END=237872402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:10,0 chr1 237872404 . A . PASS END=237872404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 237872770 . T . PASS END=237872770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,169,255:40,0 chr1 237872780 . G . PASS END=237872867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,181,255:40,0 chr1 237875040 . C . PASS END=237875041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr1 237875045 . A . PASS END=237875137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:72:0,120,1800:0,175,255:40,0 chr1 237875147 . T . PASS END=237875147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr1 237880494 . A . PASS END=237880494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 237880498 . G . PASS END=237880501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr1 237880502 . C . PASS END=237880502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 237880503 . T . PASS END=237880507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:25,0 chr1 237880508 . C . PASS END=237880508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr1 237880509 . T . PASS END=237880517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr1 237880518 . A . PASS END=237880519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 237880520 . G . PASS END=237880521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr1 237880522 . A . PASS END=237880526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 237880527 . A . PASS END=237880527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 237880528 . A . PASS END=237880536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:30,0 chr1 237880537 . A . PASS END=237880537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr1 237880538 . A . PASS END=237880589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1125:0,83,255:35,0 chr1 237880590 . G . PASS END=237880590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 237880591 . T . PASS END=237880596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr1 237880597 . C . PASS END=237880597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 237880598 . C . PASS END=237880606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,950:0,84,255:28,0 chr1 237880607 . T . PASS END=237880607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 237880608 . G . PASS END=237880609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 237880610 . A . PASS END=237880632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,70,255:25,0 chr1 237880633 . G . PASS END=237880645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr1 237880646 . T . PASS END=237880646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:16,0 chr1 237880647 . G . PASS END=237880668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 237880681 . T . PASS END=237880681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 237881748 . A . PASS END=237881748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,253,255:40,0 chr1 237881762 . A . PASS END=237881769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:97:0,120,1800:0,255,255:40,0 chr1 237881770 . C T, 349.60 PASS DP=101;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,101,0:1.000,0.000:101:0,52,0:0,49,0:300:387,303,0,3821,303,3821:255,255,0:0,0:3.4960e+02,2.9960e+02,0.0000e+00,4.4853e+02,3.3437e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,56,45:0,0,49,52 chr1 237881771 . G . PASS END=237881807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:101:0,120,1800:0,255,255:40,0 chr1 237881808 . A . PASS END=237881821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:107:0,120,1800:0,255,255:40,0 chr1 237886428 . T . PASS END=237886562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:52:0,114,1710:0,140,255:40,0 chr1 237889573 . A . PASS END=237889608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,162,255:40,0 chr1 237889612 . A . PASS END=237889612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 237890387 . G . PASS END=237890399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1268:0,102,255:38,0 chr1 237890400 . A . PASS END=237890436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,104,1368:0,104,255:40,0 chr1 237890437 . C T, 217.63 PASS DP=58;MQ=249.46;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,31,0:0,26,0:168:255,171,0,2144,171,2144:255,171,0:0,0:2.1763e+02,1.6763e+02,0.0000e+00,4.5000e+02,2.0240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,26:0,0,25,32 chr1 237890438 . A . PASS END=237890474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,149,255:40,0 chr1 237890475 . T . PASS END=237890497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:96:38:0,96,1365:0,98,255:40,0 chr1 237890498 . A . PASS END=237890498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1208:0,75,255:30,0 chr1 237890499 . G . PASS END=237890499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 237890503 . G . PASS END=237890503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 237893560 . G . PASS END=237893636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:82:0,120,1800:0,180,255:40,0 chr1 237893637 . A . PASS END=237893656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:90:0,120,1800:0,254,255:40,0 chr1 237895346 . A . PASS END=237895449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,102,1800:0,102,255:40,0 chr1 237895456 . T . PASS END=237895456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 237897002 . C . PASS END=237897002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,246,255:40,0 chr1 237897005 . C . PASS END=237897056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,160,255:40,0 chr1 237897067 . A . PASS END=237897067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr1 237905590 . A . PASS END=237905590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,166,255:40,0 chr1 237905593 . C . PASS END=237905593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:69:61:0,69,1783:0,69,255:40,0 chr1 237905596 . A . PASS END=237905622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:96:66:0,96,1800:0,96,255:40,0 chr1 237905623 . G . PASS END=237905649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:82:0,120,1800:0,203,255:40,0 chr1 237906900 . G . PASS END=237906923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,161,255:40,0 chr1 237919580 . G . PASS END=237919580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr1 237919582 . G . PASS END=237919582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1318:0,102,255:34,0 chr1 237919588 . G . PASS END=237919684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1173:0,88,255:40,0 chr1 237919685 . A . PASS END=237919687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,82,255:26,0 chr1 237919696 . C . PASS END=237919696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,68,255:20,0 chr1 237920985 . T . PASS END=237920985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,137,255:40,0 chr1 237920997 . G . PASS END=237921076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:65:0,120,1800:0,177,255:40,0 chr1 237923076 . A . PASS END=237923090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1344:0,111,255:40,0 chr1 237923091 . C . PASS END=237923152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,102,1455:0,102,255:40,0 chr1 237923156 . A . PASS END=237923156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:33,0 chr1 237924255 . T . PASS END=237924328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,154,255:40,0 chr1 237932887 . C . PASS END=237932906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:33,0 chr1 237932907 . A . PASS END=237932919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:27:0,69,1035:0,81,255:26,0 chr1 237934096 . A . PASS END=237934096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 237934107 . G . PASS END=237934178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1350:0,95,255:40,0 chr1 237934179 . A . PASS END=237934179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:29,0 chr1 237934180 . C . PASS END=237934187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:32,0 chr1 237934201 . C . PASS END=237934202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr1 237935299 . T . PASS END=237935299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 237935302 . T . PASS END=237935302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 237935312 . A . PASS END=237935400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:84:43:0,84,1260:0,116,255:40,0 chr1 237936820 . G . PASS END=237936948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:52:0,120,1800:0,126,255:40,0 chr1 237936954 . C . PASS END=237936954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 237941966 . G . PASS END=237942070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:38:0,91,1429:0,91,255:40,0 chr1 237944865 . G . PASS END=237944946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:72:0,120,1800:0,212,255:40,0 chr1 237944949 . A . PASS END=237944949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr1 237944951 . T . PASS END=237944951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 237946964 . T C, 48.24 PASS DP=31;MQ=250.00;MQRankSum=4.664;ReadPosRankSum=0.140;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,13,0:0.419,0.000:31:10,7,0:8,6,0:47:83,0,50,457,644,1101:255,0,255:18,0:4.8238e+01,8.6978e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,6,7,6:12,6,7,6 chr1 237946975 . G . PASS END=237947001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,110,1512:0,110,255:40,0 chr1 237947002 . A . PASS END=237947208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1109:0,90,255:40,0 chr1 237947209 . T . PASS END=237947209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 237947210 . T . PASS END=237947211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 237947212 . T . PASS END=237947274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,878:0,68,255:26,0 chr1 237947275 . A . PASS END=237947303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:18:0,50,653:0,50,255:19,0 chr1 237947304 . G . PASS END=237947307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 237947308 . C . PASS END=237947339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,659:0,51,255:20,0 chr1 237947340 . C . PASS END=237947346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 237947347 . A . PASS END=237947347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:21,0 chr1 237947348 . T . PASS END=237947348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr1 237947349 . A . PASS END=237947349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr1 237947350 . C . PASS END=237947357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 237947358 . C . PASS END=237947358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 237947359 . A . PASS END=237947365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 237947366 . T . PASS END=237947366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:20,0 chr1 237947367 . C . PASS END=237947368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 237947369 . G . PASS END=237947369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:20,0 chr1 237947370 . G . PASS END=237947382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,61,255:24,0 chr1 237947383 . G . PASS END=237947387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,843:0,56,255:19,0 chr1 237947388 . C . PASS END=237947388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 237947389 . T . PASS END=237947405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr1 237947406 . T . PASS END=237947406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 237947407 . T . PASS END=237947407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 237947408 . T . PASS END=237947413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 237947414 . C . PASS END=237947414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr1 237947415 . C . PASS END=237947419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 237947420 . C . PASS END=237947423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 237947424 . A . PASS END=237947428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 237947429 . G . PASS END=237947429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 237947430 . G . PASS END=237947440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 237947441 . A . PASS END=237947452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,676:0,46,255:19,0 chr1 237947453 . G . PASS END=237947468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,747:0,63,255:23,0 chr1 237947469 . A . PASS END=237947469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 237947470 . G . PASS END=237947501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr1 237947502 . C . PASS END=237947502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 237947503 . A . PASS END=237947509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 237947510 . G . PASS END=237947512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr1 237947513 . G . PASS END=237947513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 237947514 . T . PASS END=237947514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,775:0,25,255:20,0 chr1 237947515 . C . PASS END=237947525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,682:0,46,255:19,0 chr1 237947526 . T . PASS END=237947527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 237947528 . C . PASS END=237947529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 237947530 . T . PASS END=237947538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 237947539 . T . PASS END=237947558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,548:0,43,255:18,0 chr1 237947559 . A . PASS END=237947559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,528:0,37,255:17,0 chr1 237947560 . A . PASS END=237947584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr1 237947585 . C . PASS END=237947597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr1 237947598 . A . PASS END=237947598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr1 237947599 . C . PASS END=237947599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 237947600 . C . PASS END=237947600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:21,0 chr1 237947601 . A . PASS END=237947633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,930:0,69,255:24,0 chr1 237947634 . G . PASS END=237947634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 237947635 . A . PASS END=237947639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr1 237947640 . G . PASS END=237947641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 237947642 . C . PASS END=237947644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 237947645 . G . PASS END=237947646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 237947647 . A . PASS END=237947647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,880:0,73,255:28,0 chr1 237947648 . C . PASS END=237947681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1202:0,83,255:32,0 chr1 237947682 . G . PASS END=237947682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr1 237947683 . A . PASS END=237947688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 237947689 . C . PASS END=237947689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr1 237947690 . G . PASS END=237947705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr1 237947706 . A . PASS END=237947706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr1 237947707 . G . PASS END=237947722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 237947723 . C . PASS END=237947723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 237947724 . A . PASS END=237947726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 237947727 . C . PASS END=237947760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1133:0,80,255:35,0 chr1 237947761 . A . PASS END=237947761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:34,0 chr1 237947762 . C . PASS END=237947769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1136:0,88,255:34,0 chr1 237947770 . T . PASS END=237947770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr1 237947771 . G . PASS END=237947787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:32,0 chr1 237947788 . T . PASS END=237947788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr1 237947789 . C . PASS END=237947802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:31,0 chr1 237947803 . T . PASS END=237947803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:29,0 chr1 237947804 . G . PASS END=237947806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 237947807 . G . PASS END=237947807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 237947808 . A . PASS END=237947815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1149:0,93,255:31,0 chr1 237947816 . G . PASS END=237947816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:29,0 chr1 237947817 . A . PASS END=237947818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 237947819 . A . PASS END=237947819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 237947820 . A . PASS END=237947822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1156:0,93,255:31,0 chr1 237947823 . G . PASS END=237947823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1038:0,43,255:27,0 chr1 237947824 . T . PASS END=237947871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1081:0,82,255:32,0 chr1 237947872 . A . PASS END=237947872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:30,0 chr1 237947873 . C . PASS END=237947887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1305:0,92,255:31,0 chr1 237947888 . G . PASS END=237947888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 237947889 . A . PASS END=237947904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1149:0,82,255:32,0 chr1 237947905 . T . PASS END=237947905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 237947906 . G . PASS END=237947939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1149:0,86,255:31,0 chr1 237947940 . T . PASS END=237947940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:29,0 chr1 237947941 . G . PASS END=237947978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1157:0,93,255:33,0 chr1 237947979 . A . PASS END=237947979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:28,0 chr1 237947980 . A . PASS END=237947989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 237947990 . A . PASS END=237947993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,984:0,70,255:26,0 chr1 237947994 . G . PASS END=237947996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 237947997 . G . PASS END=237947997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 237947998 . A . PASS END=237947998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:25,0 chr1 237947999 . A . PASS END=237947999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 237948000 . C . PASS END=237948007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 237948008 . C . PASS END=237948012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,905:0,70,255:26,0 chr1 237948013 . T . PASS END=237948013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 237948014 . G . PASS END=237948018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 237948019 . A . PASS END=237948025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 237948026 . T . PASS END=237948030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,978:0,70,255:26,0 chr1 237948031 . A . PASS END=237948031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 237948032 . T . PASS END=237948032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr1 237948033 . G . PASS END=237948033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:20,0 chr1 237948034 . A . PASS END=237948055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,900:0,68,255:26,0 chr1 237948056 . G . PASS END=237948058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 237948059 . A . PASS END=237948059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr1 237948060 . G . PASS END=237948060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 237948061 . A . PASS END=237948061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 237948062 . G . PASS END=237948284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:29:0,81,1180:0,86,255:40,0 chr1 237948288 . G . PASS END=237948306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,167,255:40,0 chr1 237949260 . T . PASS END=237949260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 237949269 . G . PASS END=237949336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:103:0,120,1800:0,255,255:40,0 chr1 237949339 . A . PASS END=237949340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:103:0,120,1800:0,255,255:40,0 chr1 237951254 . G . PASS END=237951413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,106,1778:0,106,255:40,1 chr1 237951414 . A . PASS END=237951435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:43:0,108,1620:0,116,255:40,0 chr1 237951441 . A . PASS END=237951441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1458:0,107,255:36,0 chr1 237954729 . A . PASS END=237954815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:84:0,120,1800:0,199,255:40,0 chr1 237955405 . G . PASS END=237955602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,117,1651:0,119,255:40,0 chr1 237955603 . A . PASS END=237955623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:90:54:0,90,1679:0,90,255:40,0 chr1 237957165 . A . PASS END=237957165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr1 237957167 . G . PASS END=237957198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,130,255:40,0 chr1 237957199 . A . PASS END=237957271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,144,255:40,0 chr1 237957272 . T . PASS END=237957297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,103,1665:0,103,255:40,0 chr1 237958589 . G . PASS END=237958631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:108:0,120,1800:0,255,255:40,0 chr1 237961324 . C . PASS END=237961324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr1 237961332 . C . PASS END=237961332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 237961337 . G . PASS END=237961341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1233:0,86,255:35,0 chr1 237961342 . G . PASS END=237961342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1188:0,58,255:33,0 chr1 237961343 . G . PASS END=237961466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:37:0,87,1313:0,87,255:40,0 chr1 237961467 . C . PASS END=237961470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:33:0,68,1080:0,68,255:25,0 chr1 237965151 . T . PASS END=237965151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 237965156 . A . PASS END=237965180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,119,1800:0,119,255:40,0 chr1 237965181 . C . PASS END=237965217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,100,1800:0,100,255:40,0 chr1 237969429 . C . PASS END=237969429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:32,0 chr1 237969434 . T . PASS END=237969434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1134:0,96,255:32,0 chr1 237969437 . T . PASS END=237969528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1189:0,89,255:40,0 chr1 237969529 . G . PASS END=237969554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr1 237969555 . T . PASS END=237969555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:20,0 chr1 237969556 . G . PASS END=237969559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 237969560 . T . PASS END=237969563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 237969564 . T . PASS END=237969565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 237969566 . A . PASS END=237969579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,621:0,40,255:17,0 chr1 237969580 . A . PASS END=237969580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,496:0,21,255:14,0 chr1 237969581 . C . PASS END=237969583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr1 237972201 . C . PASS END=237972212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:34:0,97,1266:0,97,255:39,0 chr1 237972213 . G . PASS END=237972213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:29:41:0,29,1333:0,29,255:37,1 chr1 237972214 . T . PASS END=237972335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:88:41:0,88,1312:0,88,255:40,1 chr1 237982322 . T . PASS END=237982322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 237982336 . T . PASS END=237982350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:39,0 chr1 237982351 . A . PASS END=237982351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1314:0,68,255:36,0 chr1 237982352 . T . PASS END=237982492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:39:0,93,1361:0,94,255:40,0 chr1 237982500 . T . PASS END=237982500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr1 237990122 . A G, 184.99 PASS DP=47;MQ=250.00;FractionInformativeReads=0.979 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,20,0:0,26,0:135:223,138,0,1754,138,1754:255,141,0:0,0:1.8499e+02,1.3499e+02,0.0000e+00,4.5000e+02,1.6976e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,26:0,0,30,16 chr1 237991669 . A . PASS END=237991669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr1 237991681 . G . PASS END=237991729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,197,255:40,0 chr1 237991730 . C . PASS END=237991745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,209,255:40,0 chr1 237991750 . G . PASS END=237991750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,206,255:40,0 chr1 237993829 . G . PASS END=237993930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1102:0,81,255:40,0 chr1 237994805 . T . PASS END=237994805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 237994807 . T . PASS END=237994807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr1 237994814 . G . PASS END=237994865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,164,255:40,0 chr1 237994867 . T . PASS END=237994867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 237994877 . A . PASS END=237994877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 237995845 . T . PASS END=237995845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr1 237995852 . G . PASS END=237995874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,184,255:40,0 chr1 237995875 . T . PASS END=237995947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:65:0,120,1800:0,143,255:40,0 chr1 237995955 . C . PASS END=237995955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,181,255:40,0 chr1 237996026 . C . PASS END=237996027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,150,255:40,0 chr1 237996054 . G . PASS END=237996054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr1 237996089 . C . PASS END=237996089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr1 237996113 . C . PASS END=237996113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 237996134 . C . PASS END=237996134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,99,1485:0,132,255:33,0 chr1 237996153 . C . PASS END=237996153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 237996219 . C . PASS END=237996219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr1 237996246 . C . PASS END=237996246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr1 237996285 . C . PASS END=237996285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 237996301 . A . PASS END=237996301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 237996325 . C . PASS END=237996326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,147,255:40,0 chr1 237996346 . A . PASS END=237996346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 237996419 . A . PASS END=237996419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr1 237996456 . A . PASS END=237996456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr1 237996513 . G . LowGQ END=237996513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,10:73:0:73:0,0,1857:102,0,255:40,13 chr1 237996581 . G GAA,GA,GAAA, 50.00 PASS DP=33;MQ=243.66;MQRankSum=3.396;ReadPosRankSum=1.022;FractionInformativeReads=0.667;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,2,1,0:0.409,0.091,0.045,0.000:22:6,4,1,0,0:4,5,1,1,0:46:61,0,50,52,57,85,55,125,102,105,51,62,80,110,83:255,0,255:9,14:5.0000e+01,1.0613e-04,5.3000e+01,5.1963e+01,6.7866e+01,8.7512e+01,5.5426e+01,1.3634e+02,1.1331e+02,1.0843e+02,7.5176e+01,9.6875e+01,1.1427e+02,1.4499e+02,1.0988e+02:0.00,11.00,14.00,11.00,22.00,14.00,11.00,22.00,22.00,14.00,34.77,45.77,45.77,45.77,37.77:4,6,4,8:4,6,9,3 chr1 237996589 . A . PASS END=237996589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 237996651 . GC G,GCC, 0.32 DRAGENIndelHardQUAL DP=11;MQ=231.12;MQRankSum=2.017;ReadPosRankSum=-0.421;FractionInformativeReads=0.727;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,2,2,0:0.250,0.250,0.000:8:1,0,0,0:3,2,2,0:11:0,5,47,2,14,30,9,30,24,32:130,0,247:5,5:3.2418e-01,1.6098e+01,6.1544e+01,1.3271e+01,3.6775e+01,4.3895e+01,4.4539e+01,7.5686e+01,7.0304e+01,6.9802e+01:0.00,11.00,14.00,11.00,22.00,14.00,34.77,45.77,45.77,37.77:0,4,0,4:3,1,4,0 chr1 237996658 . C . LowGQ END=237996658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr1 237996659 . C . PASS END=237996659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 237996660 . C . PASS END=237996660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr1 237996661 . C . LowGQ END=237996661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:10,0 chr1 237996664 . G . PASS END=237996664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 237996670 . G . LowGQ END=237996670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:9,0 chr1 237996708 . G . PASS END=237996708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr1 237996728 . T . PASS END=237996728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 237996816 . G . PASS END=237996816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:45:27:0,45,675:0,64,255:14,0 chr1 237996893 . C . PASS END=237996893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 237996935 . C . PASS END=237996935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr1 237996970 . G . PASS END=237996970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 237997012 . A . PASS END=237997012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 237997017 . G . PASS END=237997017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr1 237997055 . A . PASS END=237997055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 237997078 . A . PASS END=237997078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:34,0 chr1 237997099 . G . PASS END=237997099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 237997215 . G . PASS END=237997215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr1 237997276 . C . PASS END=237997276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr1 238045722 . T . PASS END=238045722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 238045723 . T . PASS END=238045849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:28:0,84,1019:0,84,255:40,0 chr1 238046042 . G . PASS END=238046146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:48:0,96,1562:0,96,255:40,0 chr1 238048069 . G . PASS END=238048147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1197:0,83,255:40,0 chr1 238048465 . C . PASS END=238048615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,102,1521:0,108,255:40,0 chr1 238048691 . C . PASS END=238048853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1081:0,85,255:40,0 chr1 238048854 . C . PASS END=238048878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 238048879 . A . PASS END=238048880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 238049056 . C . PASS END=238049057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:35,0 chr1 238049058 . T . PASS END=238049058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:34,0 chr1 238049059 . T . PASS END=238049060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 238049061 . G . PASS END=238049061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 238049062 . C . PASS END=238049175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:35:0,93,1485:0,93,255:40,0 chr1 238049176 . T . PASS END=238049176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:33,0 chr1 238049177 . G . PASS END=238049186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:32,0 chr1 238050071 . C . PASS END=238050154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,117,1615:0,119,255:40,0 chr1 238050155 . C . PASS END=238050155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1498:0,77,255:35,0 chr1 238050156 . G . PASS END=238050167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,102,1530:0,104,255:36,0 chr1 238050168 . T . PASS END=238050168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr1 238050674 . C . PASS END=238050676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,947:0,61,255:32,0 chr1 238050677 . T . PASS END=238050851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:33:0,84,1150:0,85,255:40,0 chr1 238050852 . T . PASS END=238050861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,86,255:26,0 chr1 238051658 . C . PASS END=238051784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1194:0,83,255:40,0 chr1 238051785 . C . PASS END=238051788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr1 238051789 . T . PASS END=238051789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:24,0 chr1 238051790 . C . PASS END=238051810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,728:0,61,255:26,0 chr1 238053167 . C . PASS END=238053167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1459:0,107,255:40,0 chr1 238053168 . T . PASS END=238053168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:42:41:0,42,1115:0,42,255:37,0 chr1 238053169 . A . PASS END=238053169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1451:0,84,255:40,0 chr1 238053170 . G . PASS END=238053171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1252:0,67,255:38,0 chr1 238053172 . A . PASS END=238053172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 238053173 . G . PASS END=238053173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:40:41:0,40,1148:0,40,255:35,0 chr1 238053174 . A . PASS END=238053175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 238053176 . C . LowGQ END=238053176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,8:41:0:41:0,0,1008:60,0,255:33,0 chr1 238053177 . C . PASS END=238053178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:90:41:0,90,1382:0,90,255:40,0 chr1 238053179 . T . LowGQ END=238053179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:0:42:0,0,1127:32,0,255:36,0 chr1 238053180 . A . PASS END=238053180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1329:0,62,255:39,0 chr1 238053181 . G . PASS END=238053181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:33:44:0,33,1261:0,33,255:38,0 chr1 238053182 . G . PASS END=238053183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:44:0,82,1443:0,82,255:40,0 chr1 238053184 . C . PASS END=238053184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:52:44:0,52,1365:0,52,255:40,0 chr1 238053185 . A . PASS END=238053185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr1 238053186 . C . PASS END=238053186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1429:0,71,255:40,0 chr1 238053187 . T . PASS END=238053187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:27:46:0,27,1405:0,27,255:40,0 chr1 238053188 . T . PASS END=238053190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:46:0,88,1504:0,88,255:40,0 chr1 238053191 . G . PASS END=238053191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:55:46:0,55,1388:0,55,255:40,0 chr1 238053192 . C . PASS END=238053197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:46:0,90,1487:0,90,255:40,0 chr1 238053198 . C . PASS END=238053198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:19:47:0,19,1363:0,19,255:40,0 chr1 238053199 . C . PASS END=238053199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 238053200 . T . PASS END=238053200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:55:48:0,55,1438:0,55,255:40,0 chr1 238053201 . C . PASS END=238053206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:89:48:0,89,1597:0,89,255:40,0 chr1 238053207 . A . PASS END=238053207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:70:51:0,70,1618:0,70,255:40,0 chr1 238053208 . A . PASS END=238053208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr1 238053209 . C . PASS END=238053209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:37:52:0,37,1576:0,37,255:40,0 chr1 238053210 . C . PASS END=238053213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr1 238053214 . T . PASS END=238053214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:26:51:0,26,1618:0,26,255:40,0 chr1 238053215 . T . PASS END=238053220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:51:0,120,1800:0,123,255:40,0 chr1 238053221 . C . PASS END=238053221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:68:52:0,68,1720:0,68,255:40,0 chr1 238053222 . A . PASS END=238053226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:92:47:0,92,1612:0,92,255:40,0 chr1 238053227 . C . PASS END=238053227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1645:0,72,255:40,0 chr1 238053228 . G . PASS END=238053230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,128,255:40,0 chr1 238053231 . T . PASS END=238053231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:64:48:0,64,1587:0,64,255:40,0 chr1 238053232 . G . PASS END=238053242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1541:0,96,255:40,0 chr1 238053243 . T . PASS END=238053243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1442:0,65,255:40,0 chr1 238053244 . C . PASS END=238053269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1509:0,93,255:40,0 chr1 238053355 . C . PASS END=238053475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:41:0,92,1496:0,92,255:40,0 chr1 238053476 . T . PASS END=238053476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1264:0,51,255:34,0 chr1 238053761 . C . PASS END=238053763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr1 238053764 . A . PASS END=238053764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 238053765 . A . PASS END=238053767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,693:0,63,255:23,0 chr1 238053768 . T . PASS END=238053768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:22,0 chr1 238053769 . A . PASS END=238053772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,764:0,69,255:25,0 chr1 238053773 . G . PASS END=238053781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr1 238053782 . G . PASS END=238053782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 238053783 . A . PASS END=238053784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr1 238053785 . A . PASS END=238053785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:29,0 chr1 238053786 . C . PASS END=238053796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1103:0,90,255:30,0 chr1 238053797 . G . PASS END=238053797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 238053798 . G . PASS END=238053804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr1 238053805 . T . PASS END=238053805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:28,0 chr1 238053806 . T . PASS END=238053814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 238053815 . A . PASS END=238053815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,830:0,59,255:28,0 chr1 238053816 . C . PASS END=238053864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1089:0,80,255:38,0 chr1 238053865 . T . PASS END=238053867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 238053868 . G . PASS END=238053870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,117,255:29,0 chr1 238053871 . T . PASS END=238053871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:28,0 chr1 238053872 . T . PASS END=238053878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1305:0,93,255:30,0 chr1 238053879 . G . PASS END=238053879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr1 238053880 . C . PASS END=238053882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 238053883 . C . PASS END=238053883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 238053884 . T . PASS END=238053891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 238053892 . A . PASS END=238053892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 238053893 . G . PASS END=238053901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 238053902 . A . PASS END=238053919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,954:0,67,255:26,0 chr1 238053920 . A . PASS END=238053920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,844:0,59,255:22,0 chr1 238053921 . C . PASS END=238053935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,890:0,62,255:25,0 chr1 238107552 . T . PASS END=238107602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1002:0,81,255:33,0 chr1 238107603 . A . PASS END=238107611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,77,255:25,0 chr1 238107612 . C . PASS END=238107626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:21:0,54,810:0,62,255:19,0 chr1 239549818 . A . PASS END=239549844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,625:0,48,255:19,0 chr1 239549845 . C . PASS END=239549857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,735:0,60,255:22,0 chr1 239549858 . C . PASS END=239549860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 239549861 . G . PASS END=239549877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,734:0,66,255:22,0 chr1 239549878 . T . PASS END=239549878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr1 239549879 . C . PASS END=239549893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,791:0,66,255:23,0 chr1 239549894 . A . PASS END=239549894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr1 239549895 . G . PASS END=239549903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:21,0 chr1 239549904 . G . PASS END=239549904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 239549905 . G . PASS END=239549912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 239549913 . C . PASS END=239549920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 239549921 . A . PASS END=239549933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr1 239549934 . G . PASS END=239549934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,759:0,22,255:19,0 chr1 239549935 . C . PASS END=239549959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,870:0,69,255:25,0 chr1 239549960 . C . PASS END=239549967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 239549968 . C . PASS END=239549988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 239549989 . G . PASS END=239549989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:24,0 chr1 239549990 . G . PASS END=239549992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 239549993 . A . PASS END=239549993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr1 239549994 . A . PASS END=239550000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 239550001 . T . PASS END=239550001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr1 239550002 . C . PASS END=239550020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1195:0,83,255:34,0 chr1 239550021 . T . PASS END=239550021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1069:0,71,255:32,0 chr1 239550022 . C . PASS END=239550077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:33:0,86,1164:0,86,255:34,0 chr1 239550078 . A . PASS END=239550078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1264:0,77,255:33,0 chr1 239550079 . A . PASS END=239550125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1210:0,86,255:34,0 chr1 239550126 . G . PASS END=239550126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:26,0 chr1 239550127 . G . PASS END=239550127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 239550128 . A . PASS END=239550132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr1 239550133 . G . PASS END=239550151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:12:0,30,450:0,36,255:12,0 chr1 239550152 . G . PASS END=239550179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,258:0,24,255:9,0 chr1 239550180 . T . PASS END=239550182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr1 239550183 . C . PASS END=239550206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 239550207 . T . PASS END=239550214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr1 239550215 . G . PASS END=239550215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 239550216 . G . PASS END=239550217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 239550218 . G . PASS END=239550257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr1 239550258 . C . PASS END=239550279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr1 239550280 . C . PASS END=239550313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:18,0 chr1 239550314 . G . PASS END=239550314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 239550315 . C . PASS END=239550343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:18,0 chr1 239550344 . G . PASS END=239550344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr1 239550345 . C . PASS END=239550355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,630:0,40,255:16,0 chr1 239550356 . A . PASS END=239550362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,482:0,31,255:13,0 chr1 239550363 . C . PASS END=239550364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 239550365 . A . PASS END=239550365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 239550366 . T . PASS END=239550367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 239550368 . A . PASS END=239550395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:31:12:0,31,443:0,31,255:13,0 chr1 239550396 . C . PASS END=239550396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr1 239550397 . A . PASS END=239550422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,333:0,30,255:12,0 chr1 239550423 . A . PASS END=239550423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 240070752 . A . PASS END=240070754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 240070755 . A . PASS END=240070869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1172:0,83,255:40,0 chr1 240070870 . A . PASS END=240070870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:28:36:0,28,1078:0,28,255:31,0 chr1 240070871 . C . PASS END=240070892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1166:0,86,255:35,0 chr1 240070893 . A . PASS END=240070893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:30,0 chr1 240070894 . A . PASS END=240070900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:30,0 chr1 240070901 . C . PASS END=240070901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 240070902 . T . PASS END=240070907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,86,255:28,0 chr1 240070908 . G . PASS END=240070916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,990:0,63,255:25,0 chr1 240070917 . A . PASS END=240070923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,89,255:29,0 chr1 240070924 . A . PASS END=240070924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr1 240070925 . C . PASS END=240070951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:32:0,80,1155:0,80,255:38,0 chr1 240070952 . A . PASS END=240070952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1363:0,73,255:34,0 chr1 240070953 . G . PASS END=240070955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,102,1530:0,117,255:35,0 chr1 240070956 . G . PASS END=240070956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1396:0,65,255:32,0 chr1 240070957 . T . PASS END=240071183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:38:0,96,1365:0,98,255:40,0 chr1 240071184 . C . PASS END=240071184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:32,0 chr1 240071185 . T . PASS END=240071203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1225:0,86,255:32,0 chr1 240071204 . C . PASS END=240071204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:29,0 chr1 240071205 . A . PASS END=240071214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:31,0 chr1 240071215 . C . PASS END=240071216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 240071217 . G . PASS END=240071220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 240071221 . T . PASS END=240071222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 240071223 . A . PASS END=240071223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 240071224 . A . PASS END=240071242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 240071243 . T . PASS END=240071243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr1 240071244 . G . PASS END=240071246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 240071247 . A . PASS END=240071247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 240071248 . G . PASS END=240071249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr1 240071250 . T . PASS END=240071250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 240071251 . A . PASS END=240071255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr1 240071256 . T . PASS END=240071256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:22,0 chr1 240071257 . C . PASS END=240071260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr1 240071261 . C . PASS END=240071261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 240071262 . A . PASS END=240071270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,925:0,75,255:26,0 chr1 240071271 . C . PASS END=240071287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 240071288 . A . PASS END=240071288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr1 240071289 . C . PASS END=240071290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr1 240071291 . A . PASS END=240071291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 240071292 . A . PASS END=240071295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 240071296 . C . PASS END=240071297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 240071298 . A . PASS END=240071301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,95,255:29,0 chr1 240071302 . G . PASS END=240071303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1009:0,73,255:27,0 chr1 240071304 . G . PASS END=240071307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 240071308 . G . PASS END=240071323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,73,255:26,0 chr1 240071324 . G . PASS END=240071526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1028:0,80,255:38,0 chr1 240071527 . A . PASS END=240071532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 240071533 . G . PASS END=240071533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 240071534 . T . PASS END=240071536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:68:32:0,68,1170:0,68,255:26,0 chr1 240071537 . C . PASS END=240071537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:26,0 chr1 240071538 . A . PASS END=240071539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 240071540 . A . PASS END=240071542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,939:0,67,255:26,0 chr1 240071543 . G . PASS END=240071543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr1 240071544 . C . PASS END=240071553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr1 240071554 . T . PASS END=240071558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 240071559 . G . PASS END=240071563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:22,0 chr1 240071564 . T . PASS END=240071564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:20,0 chr1 240071565 . G . PASS END=240071571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,68,255:23,0 chr1 240071572 . A . PASS END=240071572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:22,0 chr1 240071573 . G . PASS END=240071574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,986:0,67,255:24,0 chr1 240071575 . C . PASS END=240071575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 240071576 . A . PASS END=240071592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,893:0,61,255:26,0 chr1 240071593 . T . PASS END=240071598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 240071599 . C . PASS END=240071599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 240071600 . C . PASS END=240071600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 240071601 . A . PASS END=240071603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr1 240071604 . G . PASS END=240071604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,984:0,53,255:25,0 chr1 240071605 . G . PASS END=240071607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 240071608 . G . PASS END=240071608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr1 240071609 . T . PASS END=240071610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,981:0,74,255:28,0 chr1 240071611 . C . PASS END=240071613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 240071614 . G . PASS END=240071614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr1 240071615 . A . PASS END=240071615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 240071616 . A . PASS END=240071617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr1 240071618 . C . PASS END=240071618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 240071619 . T . PASS END=240071619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 240071620 . G . PASS END=240071620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 240071621 . C . PASS END=240071621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:29,0 chr1 240071622 . A . PASS END=240071622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:29,0 chr1 240071623 . G . PASS END=240071623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:27,0 chr1 240071624 . C . PASS END=240071624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 240071625 . A . PASS END=240071625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 240071626 . G . PASS END=240071626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:27,0 chr1 240071627 . T . PASS END=240071631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 240071632 . A . PASS END=240071632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:26,0 chr1 240071633 . A . PASS END=240071633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:25,0 chr1 240071634 . C . PASS END=240071634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr1 240071635 . T . PASS END=240071639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr1 240071640 . C . PASS END=240071640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr1 240071641 . A . PASS END=240071646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,946:0,67,255:26,0 chr1 240071647 . G . PASS END=240071653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 240071654 . A . PASS END=240071654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 240071655 . C . PASS END=240071667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr1 240071668 . G . PASS END=240071668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr1 240071669 . G . PASS END=240071670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 240071671 . A . PASS END=240071672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 240071673 . T . PASS END=240071676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 240071677 . G . PASS END=240071677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr1 240071678 . C . PASS END=240071725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1070:0,80,255:30,0 chr1 240071726 . G . PASS END=240071726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:26,0 chr1 240071727 . C . PASS END=240071729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 240071730 . A . PASS END=240071733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:27,0 chr1 240071734 . A . PASS END=240071735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 240071736 . C . PASS END=240071761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,870:0,61,255:26,0 chr1 240071762 . G . PASS END=240071762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 240071763 . A . PASS END=240071769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 240071770 . A . PASS END=240071770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr1 240071771 . T . PASS END=240071771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 240071772 . G . PASS END=240071772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 240071773 . A . PASS END=240071775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 240071776 . C . PASS END=240071776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 240071777 . T . PASS END=240071778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 240071779 . C . PASS END=240071780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 240071781 . G . PASS END=240071800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,886:0,62,255:24,0 chr1 240071801 . C . PASS END=240071801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 240071802 . T . PASS END=240071811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 240071812 . A . PASS END=240071812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 240071813 . G . PASS END=240071814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 240071815 . A . PASS END=240071815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,836:0,28,255:22,0 chr1 240071816 . G . PASS END=240071830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:26,0 chr1 240071831 . G . PASS END=240071831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 240071832 . A . PASS END=240071832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr1 240071833 . C . PASS END=240071836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 240071837 . A . PASS END=240071838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,885:0,64,255:26,0 chr1 240071839 . C . PASS END=240071840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 240071841 . A . PASS END=240071842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 240071843 . C . PASS END=240071894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:32:0,84,1205:0,86,255:36,0 chr1 240071895 . A . PASS END=240071895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1178:0,61,255:31,0 chr1 240071896 . A . PASS END=240071925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1211:0,88,255:35,0 chr1 240071926 . C . PASS END=240071926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr1 240071927 . T . PASS END=240071927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1076:0,55,255:27,0 chr1 240071928 . G . PASS END=240071931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 240071932 . A . PASS END=240071935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr1 240071936 . G . PASS END=240071936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 240071937 . C . PASS END=240071940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 240071941 . G . PASS END=240071942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 240071943 . A . PASS END=240071943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 240071944 . T . PASS END=240071947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 240071948 . G . PASS END=240071948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 240071949 . G . PASS END=240071949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 240071950 . A . PASS END=240071950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 240071951 . C . PASS END=240071953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 240071954 . G . PASS END=240071954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 240071955 . G . PASS END=240071955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 240071956 . A . PASS END=240071956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr1 240071957 . G . PASS END=240072066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,964:0,81,255:35,0 chr1 240072067 . A . PASS END=240072067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:33,0 chr1 240072068 . G . PASS END=240072518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:35:0,95,1310:0,95,255:40,1 chr1 240072519 . T . PASS END=240072519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:30,0 chr1 240072520 . T . PASS END=240072524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:29,0 chr1 240255410 . A . PASS END=240255436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:12,0 chr1 240255437 . A . LowGQ END=240255437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,302:11,0,255:10,0 chr1 240255438 . G . PASS END=240255440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 240255441 . G . PASS END=240255441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:11,0 chr1 240255442 . C . PASS END=240255443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr1 240255444 . C . PASS END=240255445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr1 240255446 . G . PASS END=240255446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 240255447 . G . PASS END=240255447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr1 240255448 . T . PASS END=240255451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr1 240255452 . G . PASS END=240255453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr1 240255454 . T . PASS END=240255454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 240255455 . T . PASS END=240255460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr1 240255461 . G . PASS END=240255461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 240255462 . A . PASS END=240255464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,548:0,51,255:17,0 chr1 240255465 . G . PASS END=240255465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr1 240255466 . C . PASS END=240255466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:16,0 chr1 240255467 . G . PASS END=240255474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr1 240255475 . C . PASS END=240255475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 240255476 . G . PASS END=240255476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 240255477 . C . PASS END=240255477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:15,0 chr1 240255478 . C . PASS END=240255479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 240255480 . A . PASS END=240255480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:15,0 chr1 240255481 . G . PASS END=240255482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 240255483 . A . PASS END=240255483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:14,0 chr1 240255484 . T . LowGQ END=240255484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,457:13,0,255:13,0 chr1 240255485 . G . PASS END=240255494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,621:0,51,255:17,0 chr1 240255495 . C . PASS END=240255499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:14,0 chr1 240255500 . G . LowGQ END=240255500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,430:15,0,255:8,0 chr1 240255501 . A . PASS END=240255501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr1 240255502 . T . PASS END=240255502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:11,0 chr1 240255503 . G . PASS END=240255507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:12,0 chr1 240255508 . A . PASS END=240255508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr1 240255509 . G . PASS END=240255514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,376:0,36,255:12,0 chr1 240255515 . A . PASS END=240255516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:10,0 chr1 240255517 . G . PASS END=240255518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 240255519 . A . PASS END=240255519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,319:0,6,255:11,0 chr1 240255520 . G . PASS END=240255523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 240255524 . A . PASS END=240255524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:10,0 chr1 240255525 . G . PASS END=240255525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 240255526 . C . LowGQ END=240255526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,349:16,0,255:9,0 chr1 240255527 . G . PASS END=240255529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 240255530 . G . PASS END=240255536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr1 240255537 . A . PASS END=240255537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:8,0 chr1 240255538 . G . PASS END=240255539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:14:0,24,360:0,42,255:8,0 chr1 240255540 . C . PASS END=240255540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:5,0 chr1 240255541 . G . PASS END=240255550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:15:15:0,15,225:0,31,255:6,0 chr1 240255551 . C . PASS END=240255556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:15:0,21,315:0,28,255:7,0 chr1 240255557 . A . PASS END=240255559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:12:15:0,12,270:0,12,255:7,0 chr1 240255560 . G . PASS END=240255564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:21:17:0,21,315:0,34,255:7,0 chr1 240255565 . A . LowGQ END=240255565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,336:21,0,255:6,0 chr1 240255566 . G . PASS END=240255567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:21:17:0,21,315:0,51,255:7,0 chr1 240255568 . GGGC G, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.366;ReadPosRankSum=0.209;FractionInformativeReads=0.938;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,8,0:0.533,0.000:15:4,2,0:3,6,0:48:71,0,50,136,202,337:215,0,255:7,13:5.0000e+01,6.5751e-05,5.2894e+01,1.4932e+02,2.3672e+02,3.5426e+02:0.00,21.00,24.00,34.77,55.77,37.77:3,4,4,4:6,1,4,4 chr1 240255569 . G . LowGQ END=240255572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,14:21:0:16:0,0,0:240,0,156:15,13 chr1 240255573 . G . PASS END=240255573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 240255574 . C . PASS END=240255574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:15,0 chr1 240255575 . G . PASS END=240255576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 240255577 . C . PASS END=240255577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,444:0,9,255:14,0 chr1 240255578 . G . PASS END=240255578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 240255579 . G . PASS END=240255579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 240255580 . C . PASS END=240255580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:14,0 chr1 240255581 . G . PASS END=240255581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 240255582 . G . PASS END=240255582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 240255583 . C . PASS END=240255583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:14,0 chr1 240255584 . G . PASS END=240255585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 240255586 . G . PASS END=240255587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 240255588 . A . PASS END=240255588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 240255589 . G . PASS END=240255589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 240255590 . T . PASS END=240255590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 240255591 . C . PASS END=240255591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 240255592 . G . PASS END=240255598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,495:0,31,255:13,0 chr1 240255599 . A . PASS END=240255599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,427:0,15,255:12,0 chr1 240255600 . A . PASS END=240255600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr1 240255601 . G . PASS END=240255602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:15:16:0,15,480:0,15,255:12,0 chr1 240255603 . A . PASS END=240255603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 240255604 . G . PASS END=240255604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:15,0 chr1 240255605 . A . PASS END=240255620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,584:0,51,255:17,0 chr1 240255621 . G . PASS END=240255622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 240255623 . G . PASS END=240255623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 240255624 . C . PASS END=240255633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 240255634 . T . PASS END=240255634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 240255635 . T . PASS END=240255638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,588:0,48,255:16,0 chr1 240255639 . A . PASS END=240255639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,496:0,9,255:15,0 chr1 240255640 . C . PASS END=240255645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr1 240255646 . G . PASS END=240255650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 240255651 . G . PASS END=240255680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 240255681 . G . PASS END=240255681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 240255682 . C . PASS END=240255697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,53,255:19,0 chr1 240255698 . G . PASS END=240255698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 240255699 . T . PASS END=240255699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr1 240255700 . A . PASS END=240255723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:24,0 chr1 240255724 . C . PASS END=240255724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 240255725 . G . PASS END=240255739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr1 240255740 . G . PASS END=240255742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr1 240255743 . C . PASS END=240255753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 240255754 . C . PASS END=240255763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr1 240255764 . C . PASS END=240255764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr1 240255765 . C . PASS END=240255776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 240255777 . T . PASS END=240255777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,954:0,53,255:27,0 chr1 240255778 . C . PASS END=240255795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:29,0 chr1 240255796 . C . PASS END=240255798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1003:0,73,255:26,0 chr1 240255799 . G . PASS END=240255800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 240255801 . C . PASS END=240255834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,886:0,62,255:24,0 chr1 240255835 . C . PASS END=240255902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,576:0,48,255:19,0 chr1 240255903 . C . PASS END=240255910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 240255911 . G . PASS END=240255929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 240255930 . G . PASS END=240255933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 240255934 . C . PASS END=240255952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,690:0,57,255:19,0 chr1 240255953 . G . PASS END=240255977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr1 240255978 . C . PASS END=240255979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 240255980 . G . PASS END=240255991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 240255992 . T . PASS END=240255992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 240255993 . T . PASS END=240256010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 240256011 . A . PASS END=240256012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 240256013 . G . PASS END=240256014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 240256015 . G . PASS END=240256018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 240256019 . C . PASS END=240256036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr1 240256037 . C . PASS END=240256066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,1 chr1 240256067 . C . PASS END=240256069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:25:20:0,25,672:0,25,255:15,1 chr1 240256070 . C . PASS END=240256076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr1 240256077 . A . PASS END=240256077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 240256078 . G . PASS END=240256086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:19,0 chr1 240256087 . C . PASS END=240256098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 240256099 . G . PASS END=240256099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr1 240256100 . G . PASS END=240256110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr1 240256111 . G . PASS END=240256111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 240256112 . C . PASS END=240256126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 240256127 . T . PASS END=240256129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 240256130 . C . PASS END=240256135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 240256136 . C . PASS END=240256149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:18,0 chr1 240256150 . G . PASS END=240256232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:13,0 chr1 240256233 . C . PASS END=240256233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 240256234 . G . PASS END=240256235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,495:0,32,255:13,0 chr1 240256236 . T . PASS END=240256239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 240256240 . C . PASS END=240256240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 240256241 . G . PASS END=240256241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 240256242 . A . PASS END=240256245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 240256246 . G . PASS END=240256258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 240256259 . G . PASS END=240256294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr1 240256295 . C . PASS END=240256295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 240256296 . C . PASS END=240256300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 240256301 . G . PASS END=240256301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 240256302 . G . PASS END=240256315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 240256316 . G . PASS END=240256316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 240256317 . A . PASS END=240256317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 240256318 . G . PASS END=240256348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:18,0 chr1 240256349 . G . PASS END=240256349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,568:0,23,255:17,0 chr1 240256350 . C . PASS END=240256369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,631:0,51,255:18,0 chr1 240256370 . A . PASS END=240256370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 240256371 . C . PASS END=240256372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 240256373 . G . PASS END=240256373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr1 240256374 . C . PASS END=240256375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 240256376 . T . PASS END=240256376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 240256377 . T . PASS END=240256377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 240256378 . C . PASS END=240256384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 240256385 . C . PASS END=240256385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 240256386 . C . PASS END=240256397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,488:0,39,255:13,0 chr1 240256398 . C . PASS END=240256445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr1 240256446 . A . PASS END=240256448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 240256449 . A . PASS END=240256451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 240256452 . A . PASS END=240256452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 240256453 . G . PASS END=240256454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 240256455 . G . PASS END=240256473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr1 240256474 . G . PASS END=240256474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 240256475 . G . PASS END=240256480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 240256481 . C . PASS END=240256481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 240256482 . C . PASS END=240256484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 240256485 . G . PASS END=240256485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr1 240256486 . G . PASS END=240256487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 240256488 . G . PASS END=240256488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr1 240256489 . C . PASS END=240256489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 240256490 . T . LowGQ END=240256490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,294:0,0,255:9,0 chr1 240256491 . C . PASS END=240256491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr1 240256492 . T . PASS END=240256492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 240256493 . C . PASS END=240256552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:13,0 chr1 240256553 . C . PASS END=240256558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 240256559 . G . PASS END=240256570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 240256571 . G . PASS END=240256571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr1 240256572 . G . PASS END=240256577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 240256578 . A . PASS END=240256580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 240256581 . C . PASS END=240256587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 240256588 . G . PASS END=240256588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 240256589 . G . PASS END=240256606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 240256607 . A . PASS END=240256624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 240256625 . C . PASS END=240256625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 240256626 . G . PASS END=240256628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 240256629 . G . PASS END=240256678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:12,0 chr1 240256679 . C . LowGQ END=240256679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr1 240256680 . G . PASS END=240256680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 240256681 . G . PASS END=240256681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr1 240256682 . C . PASS END=240256697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr1 240256698 . A . PASS END=240256733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,515:0,45,255:19,0 chr1 240256734 . G . PASS END=240256739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr1 240256740 . A . PASS END=240256741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr1 240256742 . A . PASS END=240256758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,687:0,63,255:24,0 chr1 240256759 . C . PASS END=240256760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr1 240256761 . T . PASS END=240256774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr1 240256775 . A . PASS END=240256775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr1 240256776 . G . PASS END=240256784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:26,0 chr1 240256785 . T . PASS END=240256807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:26,0 chr1 240256808 . A . PASS END=240256818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:29,0 chr1 240256819 . G . PASS END=240256819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr1 240256820 . G . PASS END=240256821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 240256822 . C A, 49.71 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=1.600;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:8,6,0:8,8,0:48:84,0,50,485,572,1057:255,0,255:16,0:4.9710e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,6,8:8,8,10,4 chr1 240256823 . G . PASS END=240256836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 240256837 . G . PASS END=240256840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 240256841 . G . PASS END=240256859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1241:0,99,255:33,0 chr1 240256860 . A . PASS END=240256894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,92,255:33,0 chr1 240256895 . G . PASS END=240256907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,992:0,65,255:26,0 chr1 240256908 . C . PASS END=240256910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 240256911 . A . PASS END=240256926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,64,255:24,0 chr1 240256927 . G . PASS END=240256927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr1 240256928 . G . PASS END=240256946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:21,0 chr1 240256947 . G . PASS END=240256953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:17,0 chr1 240256954 . G . PASS END=240257000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,435:0,39,255:13,0 chr1 240257001 . A . PASS END=240257013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr1 240257014 . C . PASS END=240257018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 240257019 . T . PASS END=240257020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 240257021 . A . PASS END=240257024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:9:0,15,225:0,27,255:5,0 chr1 240286479 . G . PASS END=240286645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:32:0,88,978:0,88,255:40,0 chr1 240341221 . C . PASS END=240341368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:36:0,87,1305:0,97,255:40,0 chr1 240343469 . A . PASS END=240343480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:82:0,120,1800:0,234,255:40,0 chr1 240351507 . A . PASS END=240351562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,139,255:40,0 chr1 240370099 . G . PASS END=240370099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 240370100 . A . PASS END=240370100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 240370101 . A . PASS END=240370130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1023:0,80,255:35,0 chr1 240370131 . C . PASS END=240370131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:33,0 chr1 240370132 . A . PASS END=240370195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1197:0,91,255:37,0 chr1 240370196 . G . PASS END=240370196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr1 240370197 . G . PASS END=240370197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 240370198 . C . PASS END=240370198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:34,0 chr1 240370199 . A . PASS END=240370239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,95,255:36,0 chr1 240370240 . G . PASS END=240370240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:29,0 chr1 240370241 . G . PASS END=240370415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1257:0,87,255:40,0 chr1 240370416 . A . PASS END=240370416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:32,0 chr1 240370417 . T . PASS END=240370433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1210:0,85,255:34,0 chr1 240370434 . A . PASS END=240370434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:34,0 chr1 240370435 . A . PASS END=240370619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:33:0,90,1332:0,92,255:40,0 chr1 240370620 . G . PASS END=240370620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr1 240370621 . T . PASS END=240370656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,96,255:35,0 chr1 240370657 . T . PASS END=240370657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1004:0,79,255:29,0 chr1 240370658 . T . PASS END=240370661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr1 240370662 . A . PASS END=240370662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:29,1 chr1 240370663 . A . PASS END=240370670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1164:0,83,255:30,0 chr1 240370671 . T . PASS END=240370671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:27,0 chr1 240370672 . A . PASS END=240370672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 240370673 . A . PASS END=240370700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:26,0 chr1 240370701 . C . PASS END=240370710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr1 240370711 . T . PASS END=240370711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:16,0 chr1 240370712 . C . PASS END=240370721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 240370722 . G . PASS END=240370722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:14,0 chr1 240370723 . C . PASS END=240370724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 240370725 . T . PASS END=240370725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 240370726 . G . PASS END=240370726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 240370727 . G . PASS END=240370727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,500:0,20,255:13,0 chr1 240370728 . C . PASS END=240370728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 240370729 . C . PASS END=240370736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:13,0 chr1 240370737 . G . PASS END=240370737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr1 240370738 . G . PASS END=240370741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 240370742 . C . PASS END=240370742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 240370743 . T . PASS END=240370744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 240370745 . C . PASS END=240370745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 240370746 . C . PASS END=240370748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 240370749 . A . PASS END=240370749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,466:0,14,255:11,0 chr1 240370750 . C . PASS END=240370757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr1 240370758 . T . LowGQ END=240370758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,329:0,0,255:9,0 chr1 240370759 . C . PASS END=240370759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 240370760 . T . PASS END=240370760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr1 240370761 . C . PASS END=240370763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr1 240370764 . T . PASS END=240370764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr1 240370765 . G . PASS END=240370767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr1 240370768 . A . PASS END=240370768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 240370769 . T . PASS END=240370769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 240370770 . G . PASS END=240370770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr1 240370771 . A . PASS END=240370773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 240370774 . G . PASS END=240370780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:27:14:0,27,405:0,28,255:10,0 chr1 240370781 . C . PASS END=240370781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 240370782 . T . PASS END=240370782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,416:0,9,255:9,0 chr1 240370783 . C . PASS END=240370783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr1 240370784 . T . PASS END=240370784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:9,0 chr1 240370785 . G . PASS END=240370788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr1 240370789 . A . PASS END=240370789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr1 240370790 . G . PASS END=240370792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr1 240370793 . C . PASS END=240370793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 240370794 . A . PASS END=240370794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 240370795 . G . PASS END=240370795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr1 240370796 . C . PASS END=240370797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 240370798 . A . PASS END=240370799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr1 240370800 . T . PASS END=240370800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:12,0 chr1 240370801 . C . PASS END=240370804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 240370805 . A . PASS END=240370806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,458:0,25,255:14,0 chr1 240370807 . C . PASS END=240370808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 240370809 . T . PASS END=240370809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr1 240370810 . C . PASS END=240370811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr1 240370812 . T . PASS END=240370812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 240370813 . C . PASS END=240370824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr1 240370825 . A . PASS END=240370825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:15,0 chr1 240370826 . C . PASS END=240370836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr1 240370837 . C . PASS END=240370837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr1 240370838 . C . PASS END=240370839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:16,0 chr1 240370840 . C . PASS END=240370840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr1 240370841 . C . PASS END=240370847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 240370848 . C . PASS END=240370848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr1 240370849 . C . PASS END=240370849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr1 240370850 . C . PASS END=240370850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 240370851 . T . PASS END=240370851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:17:17:0,17,399:0,17,255:14,0 chr1 240370852 . C . PASS END=240370853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 240370854 . T . PASS END=240370854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,448:0,34,255:15,0 chr1 240370855 . C . PASS END=240370855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 240370856 . T . PASS END=240370856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,421:0,18,255:14,0 chr1 240370857 . T . PASS END=240370858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 240370859 . C . PASS END=240370859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 240370860 . C . PASS END=240370860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr1 240370861 . G . PASS END=240370861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,446:0,31,255:15,0 chr1 240370862 . G . PASS END=240370864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,515:0,48,255:16,0 chr1 240370865 . C . PASS END=240370865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 240370866 . G . PASS END=240370868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 240370869 . C . PASS END=240370869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,435:0,18,255:15,0 chr1 240370870 . A . PASS END=240370870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 240370871 . T . PASS END=240370873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr1 240370874 . C . PASS END=240370874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 240370875 . T . PASS END=240370875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,443:0,4,255:15,0 chr1 240370876 . C . PASS END=240370876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 240370877 . C . PASS END=240370878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,621:0,40,255:18,0 chr1 240370879 . C . PASS END=240370879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:17,0 chr1 240370880 . C . PASS END=240370883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,639:0,41,255:19,0 chr1 240370884 . G . LowGQ END=240370884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,537:13,0,255:17,0 chr1 240370885 . C . PASS END=240370885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,598:0,13,255:18,0 chr1 240370886 . C . PASS END=240370886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 240370887 . T . PASS END=240370889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,562:0,43,255:19,0 chr1 240370890 . A . PASS END=240370891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr1 240370892 . C . PASS END=240370892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 240370893 . C . PASS END=240370893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr1 240370894 . G . PASS END=240370894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,552:0,27,255:18,0 chr1 240370895 . G . PASS END=240370895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr1 240370896 . A . PASS END=240370896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:18,0 chr1 240370897 . G . PASS END=240370897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 240370898 . C . PASS END=240370898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 240370899 . A . PASS END=240370899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,587:0,10,255:17,0 chr1 240370900 . G . PASS END=240370900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:18,0 chr1 240370901 . G . PASS END=240370901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr1 240370902 . C . PASS END=240370904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:11:21:0,11,607:0,11,255:17,0 chr1 240370905 . A . PASS END=240370905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:18,0 chr1 240370906 . C . PASS END=240370906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:18,0 chr1 240370907 . T . LowGQ END=240370907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,515:42,0,255:17,0 chr1 240370908 . C . PASS END=240370908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,691:0,27,255:19,0 chr1 240370909 . C . PASS END=240370910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:18,0 chr1 240370911 . T . PASS END=240370911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:18,0 chr1 240370912 . C . PASS END=240370912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 240370913 . T . LowGQ END=240370913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,374:65,0,255:15,0 chr1 240370914 . G . PASS END=240370914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:17,0 chr1 240370915 . C . PASS END=240370916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:18,0 chr1 240370917 . C . PASS END=240370917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,759:0,35,255:18,0 chr1 240370918 . C . PASS END=240370919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 240370920 . T . PASS END=240370920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,668:0,33,255:18,0 chr1 240370921 . C . PASS END=240370922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:19,0 chr1 240370923 . A . PASS END=240370923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,714:0,22,255:18,0 chr1 240370924 . C . PASS END=240370927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,751:0,50,255:19,0 chr1 240370928 . G . PASS END=240370928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 240370929 . A . LowGQ END=240370929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,637:17,0,255:20,0 chr1 240370930 . G . PASS END=240370930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:20,0 chr1 240370931 . C . PASS END=240370934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:20,0 chr1 240370935 . A C, 50.00 PASS DP=21;MQ=206.91;MQRankSum=-1.557;ReadPosRankSum=1.774;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,13,0:0.619,0.000:21:2,4,0:6,9,0:47:85,0,47,465,257,722:255,0,158:5,0:5.0000e+01,8.5683e-05,5.0127e+01,4.5000e+02,2.9217e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,6,6,7:8,0,7,6 chr1 240370936 . A . PASS END=240370936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:19,0 chr1 240370937 . T . PASS END=240370937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:19,0 chr1 240370938 . A . PASS END=240370938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,570:0,5,255:15,0 chr1 240370939 . C . PASS END=240370939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:16,0 chr1 240370940 . C . PASS END=240370940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,690:0,11,255:16,0 chr1 240370941 . T . PASS END=240370941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,678:0,27,255:17,0 chr1 240370942 . C . PASS END=240370942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 240370943 . C . PASS END=240370943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:17,0 chr1 240370944 . T . PASS END=240370946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,706:0,46,255:17,0 chr1 240370947 . G . PASS END=240370947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,582:0,27,255:14,0 chr1 240370948 . C . PASS END=240370952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,50,255:20,0 chr1 240370953 . T . PASS END=240370957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 240370958 . C . PASS END=240370958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 240370959 . C . PASS END=240370959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 240370960 . G . PASS END=240370961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr1 240370962 . A . PASS END=240370962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:19,0 chr1 240370963 . G . PASS END=240370964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,792:0,52,255:19,0 chr1 240370965 . G . PASS END=240370965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:17,0 chr1 240370966 . G . PASS END=240370966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 240370967 . C . PASS END=240370967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,746:0,6,255:20,0 chr1 240370968 . A . PASS END=240370968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,790:0,42,255:20,0 chr1 240370969 . A . PASS END=240370970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 240370971 . A . PASS END=240370971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,717:0,55,255:19,0 chr1 240370972 . C . PASS END=240370972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 240370973 . C . PASS END=240370973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 240370974 . C . PASS END=240370975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 240370976 . C . PASS END=240370977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:36:23:0,36,679:0,36,255:21,0 chr1 240370978 . C . PASS END=240370978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:21,0 chr1 240370979 . C . PASS END=240370979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 240370980 . G . PASS END=240370980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:20,0 chr1 240370981 . C . PASS END=240370981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 240370982 . C . PASS END=240370982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr1 240370983 . C . PASS END=240370985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr1 240370986 . T . LowGQ END=240370986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,5:25:0:25:0,0,484:23,0,255:19,0 chr1 240370987 . C . PASS END=240370987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 240370988 . T . PASS END=240370988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:2:25:0,2,581:0,2,255:21,0 chr1 240370989 . T . PASS END=240370989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,713:0,25,255:21,0 chr1 240370990 . C . LowGQ END=240370990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,659:14,0,255:20,0 chr1 240370991 . C . PASS END=240370991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr1 240370992 . C . PASS END=240370992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 240370993 . G . LowGQ END=240370993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,651:14,0,255:19,0 chr1 240370994 . G . PASS END=240370994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:22,0 chr1 240370995 . G . PASS END=240370996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,770:0,23,255:21,0 chr1 240370997 . C . PASS END=240370997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 240370998 . A . PASS END=240370998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,662:0,28,255:18,0 chr1 240370999 . G . PASS END=240370999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:14:28:0,14,825:0,14,255:20,0 chr1 240371000 . G . PASS END=240371000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:28:0,63,945:0,67,255:20,0 chr1 240371001 . C . PASS END=240371001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:22,0 chr1 240371002 . A . PASS END=240371002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,707:0,17,255:19,0 chr1 240371003 . T . PASS END=240371004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,64,255:20,0 chr1 240371005 . C . PASS END=240371007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:54:29:0,54,854:0,54,255:24,0 chr1 240371008 . C . PASS END=240371008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 240371009 . T . LowGQ END=240371009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,615:39,0,255:20,0 chr1 240371010 . T . PASS END=240371010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:24,0 chr1 240371011 . C . PASS END=240371011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:33:28:0,33,576:0,33,255:24,0 chr1 240371012 . C . PASS END=240371012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,797:0,64,255:24,0 chr1 240371013 . T . LowGQ END=240371013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,584:17,0,255:21,0 chr1 240371014 . C . PASS END=240371014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,80,255:25,0 chr1 240371015 . C . PASS END=240371016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,825:0,48,255:24,0 chr1 240371017 . C . PASS END=240371017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,860:0,26,255:24,0 chr1 240371018 . C . PASS END=240371018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 240371019 . T . LowGQ END=240371019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,538:3,0,255:21,0 chr1 240371020 . C . PASS END=240371020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:11:27:0,11,779:0,11,255:25,0 chr1 240371021 . T . PASS END=240371021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,667:0,33,255:24,0 chr1 240371022 . T . PASS END=240371022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,762:0,20,255:24,0 chr1 240371023 . C . PASS END=240371023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,817:0,51,255:24,0 chr1 240371024 . C . PASS END=240371025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:20:28:0,20,839:0,20,255:25,0 chr1 240371026 . G . LowGQ END=240371026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:0:28:0,0,584:3,0,255:24,0 chr1 240371027 . G . PASS END=240371028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,795:0,50,255:25,0 chr1 240371029 . G . PASS END=240371029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,801:0,28,255:24,0 chr1 240371030 . C . PASS END=240371030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,925:0,53,255:24,0 chr1 240371031 . A . PASS END=240371031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,715:0,17,255:20,0 chr1 240371032 . G . PASS END=240371032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,901:0,43,255:24,0 chr1 240371033 . G . PASS END=240371033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:24,0 chr1 240371034 . A . LowGQ END=240371036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,6:30:0:30:0,0,629:7,0,255:22,0 chr1 240371037 . A . PASS END=240371037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,946:0,57,255:24,0 chr1 240371038 . C . LowGQ END=240371038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,764:13,0,255:22,0 chr1 240371039 . C . PASS END=240371039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,876:0,37,255:23,0 chr1 240371040 . T . PASS END=240371040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:6:29:0,6,672:0,6,255:22,0 chr1 240371041 . C . PASS END=240371041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,784:0,34,255:23,0 chr1 240371042 . C . LowGQ END=240371044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,476:8,0,255:23,0 chr1 240371045 . C . PASS END=240371045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,764:0,25,255:23,0 chr1 240371046 . A . LowGQ END=240371046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,7:27:0:27:0,0,525:57,0,255:19,0 chr1 240371047 . C . PASS END=240371047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,828:0,64,255:23,0 chr1 240371048 . C . PASS END=240371048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,727:0,15,255:21,0 chr1 240371049 . C . PASS END=240371049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:23,0 chr1 240371050 . C . PASS END=240371050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 240371051 . C . PASS END=240371051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,972:0,60,255:27,0 chr1 240371052 . T . LowGQ END=240371052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,8:31:0:31:0,0,468:69,0,255:22,0 chr1 240371053 . C . PASS END=240371053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:28,0 chr1 240371054 . T . LowGQ END=240371054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,9:33:0:33:0,0,553:101,0,255:23,0 chr1 240371055 . A . PASS END=240371055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,942:0,35,255:28,0 chr1 240371056 . C . PASS END=240371056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr1 240371057 . C . PASS END=240371057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:11:33:0,11,966:0,11,255:28,0 chr1 240371058 . C . PASS END=240371058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1035:0,66,255:29,0 chr1 240371059 . G . LowGQ END=240371059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,12:32:0:32:0,0,377:184,0,255:19,0 chr1 240371060 . G . PASS END=240371060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:11:35:0,11,965:0,11,255:31,0 chr1 240371061 . A . LowGQ END=240371062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,728:32,0,255:27,0 chr1 240371063 . C . PASS END=240371063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1034:0,49,255:28,0 chr1 240371064 . G . LowGQ END=240371064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:35:0,0,875:6,0,255:27,0 chr1 240371065 . G . PASS END=240371065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1170:0,42,255:29,0 chr1 240371066 . G . PASS END=240371066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:25:38:0,25,1111:0,25,255:29,0 chr1 240371067 . C . PASS END=240371067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:36:38:0,36,1154:0,36,255:30,0 chr1 240371068 . A . LowGQ END=240371068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,9:38:0:38:0,0,812:102,0,255:25,0 chr1 240371069 . T . PASS END=240371069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:31:38:0,31,1017:0,31,255:30,0 chr1 240371070 . A . PASS END=240371070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:25:38:0,25,1020:0,25,255:30,0 chr1 240371071 . C . LowGQ END=240371071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,6:38:0:38:0,0,976:0,0,255:26,0 chr1 240371072 . C . PASS END=240371074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:36:0,81,1197:0,81,255:32,0 chr1 240371075 . C . LowGQ END=240371076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,10:37:0:37:0,0,629:11,0,255:28,0 chr1 240371077 . C . PASS END=240371077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:27:37:0,27,911:0,27,255:29,0 chr1 240371078 . C . PASS END=240371078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:32,0 chr1 240371079 . T . LowGQ END=240371080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:0:38:0,0,586:0,0,255:30,0 chr1 240371081 . C . PASS END=240371081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1164:0,64,255:33,0 chr1 240371082 . C . PASS END=240371083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:42:38:0,42,1150:0,42,255:32,0 chr1 240371084 . C . LowGQ END=240371085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,13:38:0:38:0,0,405:0,0,255:30,0 chr1 240371086 . C . PASS END=240371086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1189:0,67,255:32,0 chr1 240371087 . T . LowGQ END=240371088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,8:39:0:38:0,0,645:50,0,255:27,0 chr1 240371089 . C . PASS END=240371089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:25:38:0,25,989:0,25,255:29,0 chr1 240371090 . C . PASS END=240371090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1142:0,64,255:30,0 chr1 240371091 . C . PASS END=240371091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:38:0,96,1440:0,97,255:31,0 chr1 240371092 . G . LowGQ END=240371095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,11:38:0:38:0,0,581:0,0,255:29,0 chr1 240371096 . C . PASS END=240371096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:33:38:0,33,997:0,33,255:27,0 chr1 240371097 . G . PASS END=240371098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:39:0,48,1014:0,48,255:28,0 chr1 240371099 . G . PASS END=240371099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1252:0,64,255:28,0 chr1 240371100 . C . PASS END=240371100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:23:40:0,23,1139:0,23,255:27,0 chr1 240371101 . A . LowGQ END=240371101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:0:40:0,0,974:38,0,255:27,0 chr1 240371102 . T . PASS END=240371104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:40:42:0,40,1161:0,40,255:31,0 chr1 240371105 . C . PASS END=240371105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:92:42:0,92,1269:0,92,255:31,0 chr1 240371106 . C . PASS END=240371106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1191:0,59,255:30,0 chr1 240371107 . C . PASS END=240371107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:25:37:0,25,1156:0,25,255:30,0 chr1 240371108 . C . LowGQ END=240371110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,634:14,0,255:30,0 chr1 240371111 . C . PASS END=240371111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1205:0,94,255:32,0 chr1 240371112 . G . LowGQ END=240371112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,10:37:0:37:0,0,516:150,0,255:26,0 chr1 240371113 . C . PASS END=240371113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1119:0,39,255:30,0 chr1 240371114 . C . LowGQ END=240371114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,1050:10,0,255:29,0 chr1 240371115 . C . PASS END=240371115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1172:0,39,255:31,0 chr1 240371116 . C . LowGQ END=240371116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1056:22,0,255:31,0 chr1 240371117 . C . PASS END=240371117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1243:0,91,255:32,0 chr1 240371118 . A . LowGQ END=240371118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,8:36:0:36:0,0,579:70,0,255:26,0 chr1 240371119 . C . PASS END=240371119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1088:0,58,255:29,0 chr1 240371120 . T . LowGQ END=240371122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:36:0,0,304:26,0,255:29,0 chr1 240371123 . C . LowGQ END=240371123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:0:37:0,0,976:16,0,255:30,0 chr1 240371124 . C . PASS END=240371124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:41:37:0,41,1079:0,41,255:30,0 chr1 240371125 . G . LowGQ END=240371125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,9:37:0:37:0,0,617:90,0,255:24,0 chr1 240371126 . G . PASS END=240371126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,954:0,28,255:28,0 chr1 240371127 . A . LowGQ END=240371128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,685:6,0,255:28,0 chr1 240371129 . C . PASS END=240371129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:25:36:0,25,938:0,25,255:26,0 chr1 240371130 . G . PASS END=240371130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1057:0,61,255:27,0 chr1 240371131 . G . PASS END=240371131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:26:38:0,26,1115:0,26,255:27,0 chr1 240371132 . G . PASS END=240371132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1294:0,81,255:27,0 chr1 240371133 . C . PASS END=240371133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:12:39:0,12,1091:0,12,255:27,0 chr1 240371134 . A . LowGQ END=240371134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:0:39:0,0,914:3,0,255:26,0 chr1 240371135 . T . PASS END=240371135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1044:0,50,255:29,0 chr1 240371136 . A . PASS END=240371136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:17:39:0,17,918:0,17,255:24,0 chr1 240371137 . C . PASS END=240371138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1260:0,100,255:28,0 chr1 240371139 . C . PASS END=240371139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1202:0,78,255:28,0 chr1 240371140 . C . PASS END=240371140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 240371141 . C . PASS END=240371141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1228:0,72,255:28,0 chr1 240371142 . T . LowGQ END=240371143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:0:37:0,0,656:0,0,255:26,0 chr1 240371144 . C . PASS END=240371144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,91,255:28,0 chr1 240371145 . T . LowGQ END=240371145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,8:36:0:36:0,0,553:62,0,255:23,0 chr1 240371146 . C . PASS END=240371146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,906:0,41,255:26,0 chr1 240371147 . C . PASS END=240371147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,94,255:28,0 chr1 240371148 . C . PASS END=240371148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1189:0,69,255:29,0 chr1 240371149 . C . PASS END=240371150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1260:0,88,255:30,0 chr1 240371151 . T . LowGQ END=240371151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,10:35:0:35:0,0,454:106,0,255:22,0 chr1 240371152 . C . PASS END=240371152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,991:0,58,255:28,0 chr1 240371153 . T . LowGQ END=240371155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:0:35:0,0,529:0,0,255:27,0 chr1 240371156 . C . PASS END=240371156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1058:0,36,255:29,0 chr1 240371157 . C . PASS END=240371157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1125:0,44,255:30,0 chr1 240371158 . G . LowGQ END=240371158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,8:36:0:36:0,0,699:106,0,255:25,0 chr1 240371159 . G . PASS END=240371159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1013:0,36,255:28,0 chr1 240371160 . A . LowGQ END=240371161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:0:35:0,0,876:3,0,255:28,0 chr1 240371162 . C . PASS END=240371162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,988:0,38,255:24,0 chr1 240371163 . G . PASS END=240371164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:41:36:0,41,934:0,41,255:28,0 chr1 240371165 . G . PASS END=240371165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:37:0,84,1260:0,94,255:27,0 chr1 240371166 . C . PASS END=240371166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:22:37:0,22,1025:0,22,255:25,0 chr1 240371167 . A . LowGQ END=240371168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,9:37:0:37:0,0,714:0,0,255:26,0 chr1 240371169 . A . PASS END=240371170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:44:37:0,44,1056:0,44,255:26,0 chr1 240371171 . C . PASS END=240371171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr1 240371172 . T . LowGQ END=240371172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,12:38:0:38:0,0,446:211,0,255:20,0 chr1 240371173 . C . PASS END=240371173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:27:36:0,27,952:0,27,255:25,0 chr1 240371174 . C . PASS END=240371174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:28,0 chr1 240371175 . T . LowGQ END=240371175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,8:36:0:36:0,0,766:47,0,255:24,0 chr1 240371176 . C . PASS END=240371177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:35:0,52,986:0,52,255:27,0 chr1 240371178 . A . LowGQ END=240371178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,834:29,0,255:24,0 chr1 240371179 . C . PASS END=240371179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:16:35:0,16,889:0,16,255:24,0 chr1 240371180 . C . PASS END=240371180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:24:35:0,24,978:0,24,255:23,0 chr1 240371181 . C . PASS END=240371181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1125:0,88,255:25,0 chr1 240371182 . C . PASS END=240371182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,1047:0,28,255:26,0 chr1 240371183 . C . PASS END=240371183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:33:37:0,33,1141:0,33,255:28,0 chr1 240371184 . T . LowGQ END=240371184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,13:37:0:37:0,0,465:156,0,255:19,0 chr1 240371185 . C . PASS END=240371185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1113:0,64,255:25,0 chr1 240371186 . T . LowGQ END=240371186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,11:38:0:38:0,0,746:69,0,255:21,0 chr1 240371187 . A . PASS END=240371187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1128:0,53,255:26,0 chr1 240371188 . C . PASS END=240371189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:31:38:0,31,1011:0,31,255:24,0 chr1 240371190 . C . PASS END=240371190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1150:0,64,255:26,0 chr1 240371191 . G . LowGQ END=240371191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,9:35:0:35:0,0,586:87,0,255:21,0 chr1 240371192 . G . PASS END=240371192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,973:0,54,255:26,0 chr1 240371193 . A . LowGQ END=240371193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,8:34:0:34:0,0,682:119,0,255:22,0 chr1 240371194 . G . PASS END=240371195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,934:0,46,255:25,0 chr1 240371196 . G . LowGQ END=240371197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:33:0,0,780:11,0,255:27,0 chr1 240371198 . G . PASS END=240371199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:37:0,82,1120:0,82,255:29,0 chr1 240371200 . A . LowGQ END=240371201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:36:0,0,809:36,0,255:27,0 chr1 240371202 . A . LowGQ END=240371202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:0:36:0,0,892:14,0,255:26,0 chr1 240371203 . C . PASS END=240371203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1040:0,58,255:28,0 chr1 240371204 . C . PASS END=240371204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:19:36:0,19,1047:0,19,255:28,0 chr1 240371205 . C . PASS END=240371205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:3:36:0,3,946:0,3,255:27,0 chr1 240371206 . C . PASS END=240371206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,968:0,36,255:27,0 chr1 240371207 . C . PASS END=240371207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1080:0,47,255:28,0 chr1 240371208 . T . LowGQ END=240371208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,754:20,0,255:27,0 chr1 240371209 . C . PASS END=240371209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:21:34:0,21,897:0,21,255:27,0 chr1 240371210 . C . PASS END=240371210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1030:0,68,255:27,0 chr1 240371211 . G . LowGQ END=240371211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,620:38,0,255:26,0 chr1 240371212 . C . PASS END=240371212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 240371213 . C . PASS END=240371213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,926:0,49,255:26,0 chr1 240371214 . C . PASS END=240371214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,953:0,33,255:27,0 chr1 240371215 . C . PASS END=240371215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,848:0,40,255:25,0 chr1 240371216 . C . PASS END=240371216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 240371217 . A . LowGQ END=240371217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,7:30:0:30:0,0,499:63,0,255:22,0 chr1 240371218 . C . PASS END=240371218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 240371219 . T . LowGQ END=240371219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,8:30:0:30:0,0,415:80,0,255:21,0 chr1 240371220 . T . PASS END=240371221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:23:30:0,23,730:0,23,255:24,0 chr1 240371222 . C . PASS END=240371223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,906:0,73,255:26,0 chr1 240371224 . G . LowGQ END=240371224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,6:30:0:30:0,0,540:47,0,255:21,0 chr1 240371225 . G . PASS END=240371225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,916:0,54,255:26,0 chr1 240371226 . A . PASS END=240371226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:26:31:0,26,681:0,26,255:25,0 chr1 240371227 . G . LowGQ END=240371227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,806:4,0,255:25,0 chr1 240371228 . C . PASS END=240371228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,875:0,37,255:26,0 chr1 240371229 . G . LowGQ END=240371229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,6:30:0:30:0,0,615:32,0,255:23,0 chr1 240371230 . G . PASS END=240371230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,891:0,51,255:26,0 chr1 240371231 . G . PASS END=240371231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 240371232 . C . PASS END=240371232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,895:0,57,255:27,0 chr1 240371233 . A . LowGQ END=240371233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,5:30:0:30:0,0,670:30,0,255:24,0 chr1 240371234 . T . PASS END=240371234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,857:0,34,255:26,0 chr1 240371235 . A . LowGQ END=240371235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,799:21,0,255:23,0 chr1 240371236 . C . PASS END=240371236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,833:0,40,255:25,0 chr1 240371237 . C . PASS END=240371237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:17:30:0,17,774:0,17,255:24,0 chr1 240371238 . C . LowGQ END=240371238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,732:21,0,255:23,0 chr1 240371239 . C . PASS END=240371239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,89,255:26,0 chr1 240371240 . C . PASS END=240371240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,878:0,40,255:25,0 chr1 240371241 . T . LowGQ END=240371241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,13:30:0:30:0,0,297:176,0,255:17,0 chr1 240371242 . C . PASS END=240371242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,919:0,59,255:27,0 chr1 240371243 . C . PASS END=240371243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1093:0,80,255:28,0 chr1 240371244 . G . LowGQ END=240371244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,9:33:0:33:0,0,468:95,0,255:23,0 chr1 240371245 . C . PASS END=240371245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:10:33:0,10,862:0,10,255:26,0 chr1 240371246 . C . PASS END=240371246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,932:0,27,255:26,0 chr1 240371247 . C . PASS END=240371247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:27,0 chr1 240371248 . C . PASS END=240371248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,992:0,49,255:27,0 chr1 240371249 . C . PASS END=240371249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:28,0 chr1 240371250 . A . LowGQ END=240371250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,7:33:0:33:0,0,585:18,0,255:24,0 chr1 240371251 . C . PASS END=240371251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,993:0,68,255:27,0 chr1 240371252 . T . LowGQ END=240371254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:33:0,0,350:48,0,255:27,0 chr1 240371255 . C . PASS END=240371256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1057:0,72,255:30,0 chr1 240371257 . G . LowGQ END=240371259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,9:35:0:35:0,0,546:0,0,255:29,0 chr1 240371260 . G . PASS END=240371260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:38:35:0,38,964:0,38,255:25,0 chr1 240371261 . C . LowGQ END=240371262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,797:0,0,255:25,0 chr1 240371263 . G . PASS END=240371263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1025:0,77,255:30,0 chr1 240371264 . G . PASS END=240371265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1091:0,55,255:29,0 chr1 240371266 . A . PASS END=240371266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1103:0,61,255:29,0 chr1 240371267 . T . PASS END=240371267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:14:37:0,14,1008:0,14,255:28,0 chr1 240371268 . A . PASS END=240371268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:22:37:0,22,1048:0,22,255:27,1 chr1 240371269 . C . PASS END=240371269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:10:37:0,10,1027:0,10,255:26,1 chr1 240371270 . C . PASS END=240371270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:24:37:0,24,1038:0,24,255:26,0 chr1 240371271 . C . PASS END=240371271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:14:37:0,14,1039:0,14,255:27,0 chr1 240371272 . C . PASS END=240371273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1141:0,67,255:29,0 chr1 240371274 . T . LowGQ END=240371275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:35:0,0,958:6,0,255:28,0 chr1 240371276 . C . PASS END=240371276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1178:0,75,255:30,0 chr1 240371277 . T . LowGQ END=240371277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:35:0,0,913:12,0,255:28,0 chr1 240371278 . C . PASS END=240371278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:14:34:0,14,984:0,14,255:28,0 chr1 240371279 . C . PASS END=240371279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:24:35:0,24,1016:0,24,255:29,0 chr1 240371280 . C . PASS END=240371280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1060:0,82,255:29,0 chr1 240371281 . C . PASS END=240371281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:30,0 chr1 240371282 . C . PASS END=240371282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1131:0,33,255:30,0 chr1 240371283 . T . LowGQ END=240371283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,805:15,0,255:29,0 chr1 240371284 . C . PASS END=240371284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:31,0 chr1 240371285 . T . LowGQ END=240371285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,7:36:0:36:0,0,851:8,0,255:26,0 chr1 240371286 . T . PASS END=240371286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,1075:0,28,255:31,0 chr1 240371287 . C . PASS END=240371287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1152:0,55,255:32,0 chr1 240371288 . C . LowGQ END=240371288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,984:25,0,255:31,0 chr1 240371289 . C . PASS END=240371289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1156:0,47,255:31,0 chr1 240371290 . G . LowGQ END=240371290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,943:27,0,255:30,0 chr1 240371291 . G . PASS END=240371291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1130:0,55,255:32,0 chr1 240371292 . A . PASS END=240371292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1133:0,39,255:32,0 chr1 240371293 . G . LowGQ END=240371293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:0:37:0,0,986:16,0,255:29,0 chr1 240371294 . C . PASS END=240371294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:49:37:0,49,1168:0,49,255:32,0 chr1 240371295 . G . LowGQ END=240371296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:0:37:0,0,940:0,0,255:32,0 chr1 240371297 . G . PASS END=240371297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1219:0,48,255:33,0 chr1 240371298 . C . PASS END=240371298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1338:0,81,255:33,0 chr1 240371299 . A . PASS END=240371299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:18:40:0,18,1263:0,18,255:33,0 chr1 240371300 . T . PASS END=240371301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:23:41:0,23,1169:0,23,255:34,0 chr1 240371302 . C . PASS END=240371302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1343:0,54,255:35,0 chr1 240371303 . C . PASS END=240371303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1429:0,79,255:36,0 chr1 240371304 . T . PASS END=240371304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:7:43:0,7,1170:0,7,255:36,0 chr1 240371305 . C . PASS END=240371305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1372:0,62,255:37,0 chr1 240371306 . C . PASS END=240371306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1480:0,110,255:39,0 chr1 240371307 . T . PASS END=240371307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:40:42:0,40,1284:0,40,255:38,0 chr1 240371308 . C . PASS END=240371309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1332:0,70,255:38,0 chr1 240371310 . A . PASS END=240371310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:21:42:0,21,1156:0,21,255:33,0 chr1 240371311 . C . PASS END=240371313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1284:0,60,255:35,0 chr1 240371314 . C . PASS END=240371315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:82:46:0,82,1448:0,82,255:39,0 chr1 240371316 . T . PASS END=240371317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1357:0,66,255:40,0 chr1 240371318 . T . PASS END=240371318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1545:0,105,255:39,0 chr1 240371319 . A . PASS END=240371319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:61:48:0,61,1403:0,61,255:39,0 chr1 240371320 . C . PASS END=240371322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,102,1646:0,102,255:40,0 chr1 240371323 . G . PASS END=240371323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:49:45:0,49,1377:0,49,255:39,0 chr1 240371324 . G . PASS END=240371344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:41:0,95,1318:0,95,255:40,0 chr1 240371345 . C . PASS END=240371345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:40:42:0,40,1364:0,40,255:38,0 chr1 240371346 . C . PASS END=240371348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1410:0,90,255:40,0 chr1 240371349 . A . PASS END=240371349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1265:0,76,255:39,0 chr1 240371350 . C . PASS END=240371350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1455:0,90,255:39,0 chr1 240371351 . T . PASS END=240371351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1328:0,76,255:39,0 chr1 240371352 . T . PASS END=240371359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1352:0,84,255:40,0 chr1 240371360 . C . PASS END=240371360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1394:0,76,255:35,0 chr1 240371361 . G . PASS END=240371361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1504:0,110,255:37,0 chr1 240371362 . G . PASS END=240371362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:38,0 chr1 240371363 . G . PASS END=240371366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,104,1553:0,104,255:39,0 chr1 240371367 . A . PASS END=240371367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1407:0,63,255:37,0 chr1 240371368 . C . PASS END=240371372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:42:0,105,1468:0,105,255:40,0 chr1 240371373 . A . PASS END=240371373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1257:0,70,255:39,0 chr1 240371374 . C . PASS END=240371375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,110,1511:0,110,255:40,0 chr1 240371376 . T . PASS END=240371376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1349:0,76,255:37,0 chr1 240371377 . C . PASS END=240371381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1435:0,93,255:40,0 chr1 240371382 . T . PASS END=240371382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1194:0,79,255:36,0 chr1 240371383 . C . PASS END=240371384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1454:0,112,255:38,0 chr1 240371385 . A . PASS END=240371386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1307:0,79,255:36,0 chr1 240371387 . C . PASS END=240371388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr1 240371389 . G . LowGQ END=240371389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,7:42:0:42:0,0,1167:12,0,255:33,0 chr1 240371390 . G . PASS END=240371398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1332:0,81,255:38,0 chr1 240371399 . T . PASS END=240371399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1418:0,65,255:29,0 chr1 240371400 . A . PASS END=240371400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:43:0,93,1395:0,112,255:30,0 chr1 240371401 . C . PASS END=240371401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:49:43:0,49,1319:0,49,255:30,0 chr1 240371402 . C . PASS END=240371402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1440:0,129,255:32,0 chr1 240371403 . C . PASS END=240371403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1365:0,54,255:30,0 chr1 240371404 . C . PASS END=240371404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:39:0,96,1440:0,100,255:31,0 chr1 240371405 . C . PASS END=240371405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:32,0 chr1 240371406 . T . PASS END=240371406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1072:0,41,255:30,0 chr1 240371407 . C . PASS END=240371407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,995:0,30,255:31,0 chr1 240371408 . C . PASS END=240371409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:66:33:0,66,1019:0,66,255:30,0 chr1 240371410 . C . PASS END=240371410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1049:0,44,255:28,0 chr1 240371411 . C . PASS END=240371411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 240371412 . C . PASS END=240371412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1057:0,44,255:28,0 chr1 240371413 . C . PASS END=240371418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1191:0,83,255:33,0 chr1 240371419 . C . PASS END=240371419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1310:0,48,255:33,0 chr1 240371420 . C . PASS END=240371421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:40:0,89,1398:0,89,255:34,0 chr1 240371422 . G . PASS END=240371422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:9:38:0,9,1011:0,9,255:32,0 chr1 240371423 . G . PASS END=240371425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1246:0,81,255:34,0 chr1 240371426 . T . PASS END=240371427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:53:36:0,53,1146:0,53,255:34,0 chr1 240371428 . G . PASS END=240371430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1282:0,94,255:35,0 chr1 240371431 . A . PASS END=240371431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1127:0,47,255:33,0 chr1 240371432 . T . PASS END=240371432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1319:0,83,255:35,0 chr1 240371433 . A . PASS END=240371435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1238:0,75,255:34,0 chr1 240371436 . T . PASS END=240371436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1203:0,53,255:32,0 chr1 240371437 . C . PASS END=240371437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1164:0,39,255:31,0 chr1 240371438 . C . PASS END=240371441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1347:0,84,255:35,0 chr1 240371442 . G . PASS END=240371442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1250:0,70,255:30,0 chr1 240371443 . C . PASS END=240371454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:38:0,83,1350:0,83,255:39,0 chr1 240371455 . G . PASS END=240371455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:32:42:0,32,1291:0,32,255:39,0 chr1 240371456 . G . PASS END=240371487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:39:0,85,1242:0,85,255:40,0 chr1 240371488 . G . PASS END=240371488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:56:42:0,56,1285:0,56,255:38,0 chr1 240371489 . G . PASS END=240371504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1349:0,81,255:39,0 chr1 240371505 . T . PASS END=240371505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1258:0,70,255:36,0 chr1 240371506 . C . PASS END=240371507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:39,0 chr1 240371508 . T . PASS END=240371508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:34:39:0,34,1121:0,34,255:33,0 chr1 240371509 . C . PASS END=240371513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:39,0 chr1 240371514 . T . PASS END=240371514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1110:0,53,255:35,0 chr1 240371515 . C . PASS END=240371516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1362:0,106,255:40,0 chr1 240371517 . T . PASS END=240371520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 240371521 . G . PASS END=240371521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1224:0,72,255:38,0 chr1 240371522 . G . PASS END=240371522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:40:40:0,40,1269:0,40,255:36,0 chr1 240371523 . A . PASS END=240371524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:81:40:0,81,1313:0,81,255:39,0 chr1 240371525 . C . PASS END=240371526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:73:41:0,73,1276:0,73,255:37,0 chr1 240371527 . G . PASS END=240371529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1512:0,110,255:39,0 chr1 240371530 . A . PASS END=240371530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:45:42:0,45,1227:0,45,255:33,0 chr1 240371531 . T . PASS END=240371531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1433:0,93,255:35,0 chr1 240371532 . A . PASS END=240371532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:43:44:0,43,1246:0,43,255:33,0 chr1 240371533 . C . PASS END=240371537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:43:0,96,1397:0,96,255:37,0 chr1 240371538 . T . PASS END=240371538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:46:43:0,46,1278:0,46,255:33,0 chr1 240371539 . C . PASS END=240371539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1391:0,74,255:36,0 chr1 240371540 . C . PASS END=240371540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,105,1575:0,109,255:34,0 chr1 240371541 . A . LowGQ END=240371541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,9:40:0:40:0,0,859:66,0,255:26,0 chr1 240371542 . C . PASS END=240371543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1360:0,81,255:34,0 chr1 240371544 . C . PASS END=240371544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1199:0,48,255:32,0 chr1 240371545 . C . PASS END=240371545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1274:0,62,255:33,0 chr1 240371546 . C . PASS END=240371546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1366:0,100,255:33,0 chr1 240371547 . T . PASS END=240371547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:6:39:0,6,1117:0,6,255:31,0 chr1 240371548 . C . PASS END=240371548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1316:0,70,255:32,0 chr1 240371549 . T . PASS END=240371549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1117:0,37,255:31,0 chr1 240371550 . A . PASS END=240371550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:18:41:0,18,1156:0,18,255:32,0 chr1 240371551 . C . PASS END=240371551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1329:0,76,255:34,0 chr1 240371552 . C . PASS END=240371552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1322:0,103,255:34,0 chr1 240371553 . C . PASS END=240371553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1221:0,70,255:31,0 chr1 240371554 . A G, 133.34 PASS DP=32;MQ=80.23;FractionInformativeReads=0.938 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,11,0:0,19,0:85:171,88,0,1001,88,1001:255,113,0:0,0:1.3334e+02,8.4992e+01,0.0000e+00,4.5000e+02,1.1976e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,24:0,0,19,11 chr1 240371555 . G . PASS END=240371555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 240371556 . A . PASS END=240371556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,6:38:14:38:0,14,1037:0,14,255:29,0 chr1 240371557 . G . PASS END=240371557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1221:0,67,255:30,0 chr1 240371558 . T . LowGQ END=240371558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,795:20,0,255:25,0 chr1 240371559 . G . PASS END=240371559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:29,0 chr1 240371560 . G . PASS END=240371560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1207:0,80,255:30,0 chr1 240371561 . G . PASS END=240371561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1173:0,56,255:29,0 chr1 240371562 . C . PASS END=240371562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,94,255:29,0 chr1 240371563 . A . LowGQ END=240371563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,1006:3,0,255:26,0 chr1 240371564 . T . PASS END=240371564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,94,255:29,0 chr1 240371565 . A . LowGQ END=240371565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:0:36:0,0,955:11,0,255:27,0 chr1 240371566 . C . PASS END=240371566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:11:36:0,11,970:0,11,255:25,0 chr1 240371567 . C . PASS END=240371567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1166:0,75,255:28,0 chr1 240371568 . C . PASS END=240371568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,998:0,36,255:28,0 chr1 240371569 . C . PASS END=240371569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:28,0 chr1 240371570 . C . PASS END=240371570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1097:0,82,255:29,0 chr1 240371571 . T . LowGQ END=240371571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:0:33:0,0,925:4,0,255:29,0 chr1 240371572 . C . PASS END=240371573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1135:0,85,255:32,0 chr1 240371574 . G . LowGQ END=240371574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,826:36,0,255:25,0 chr1 240371575 . C . PASS END=240371576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1078:0,47,255:29,0 chr1 240371577 . C . PASS END=240371578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:34:0,71,1127:0,71,255:30,0 chr1 240371579 . C . PASS END=240371579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr1 240371580 . A . LowGQ END=240371580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:0:35:0,0,767:1,0,255:26,0 chr1 240371581 . C . PASS END=240371581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1155:0,36,255:28,0 chr1 240371582 . T . LowGQ END=240371583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:0:36:0,0,953:3,0,255:28,0 chr1 240371584 . C . PASS END=240371584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:30,0 chr1 240371585 . C . PASS END=240371585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1177:0,58,255:29,0 chr1 240371586 . C . PASS END=240371586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1150:0,88,255:30,0 chr1 240371587 . G . PASS END=240371587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1084:0,41,255:29,0 chr1 240371588 . G . PASS END=240371588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:30,0 chr1 240371589 . A . PASS END=240371589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1069:0,39,255:28,0 chr1 240371590 . G . PASS END=240371591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:33:0,41,1011:0,41,255:27,0 chr1 240371592 . G . PASS END=240371592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:28,0 chr1 240371593 . G . PASS END=240371595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1164:0,85,255:30,0 chr1 240371596 . A . PASS END=240371596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:28,0 chr1 240371597 . T . PASS END=240371600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1143:0,85,255:29,0 chr1 240371601 . C . PASS END=240371601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:27,0 chr1 240371602 . C . PASS END=240371602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 240371603 . C . PASS END=240371603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:27,0 chr1 240371604 . A . PASS END=240371604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,950:0,37,255:27,0 chr1 240371605 . C . PASS END=240371605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 240371606 . C . PASS END=240371606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 240371607 . T . PASS END=240371607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,892:0,40,255:25,0 chr1 240371608 . C . PASS END=240371610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:27,0 chr1 240371611 . C . PASS END=240371612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 240371613 . T . PASS END=240371613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1021:0,60,255:28,0 chr1 240371614 . C . PASS END=240371615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 240371616 . A . PASS END=240371616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,942:0,60,255:28,0 chr1 240371617 . C . PASS END=240371617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 240371618 . C . PASS END=240371619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1108:0,77,255:29,0 chr1 240371620 . G . PASS END=240371620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1000:0,38,255:25,0 chr1 240371621 . G . PASS END=240371625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1016:0,60,255:26,0 chr1 240371626 . G . PASS END=240371626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:47:32:0,47,1067:0,47,255:24,0 chr1 240371627 . G . PASS END=240371628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr1 240371629 . A . PASS END=240371629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,1037:0,24,255:23,0 chr1 240371630 . T . PASS END=240371630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,931:0,32,255:24,0 chr1 240371631 . A . PASS END=240371631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:24,0 chr1 240371632 . C . PASS END=240371636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,925:0,67,255:24,0 chr1 240371637 . T . PASS END=240371637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,861:0,26,255:24,0 chr1 240371638 . C . PASS END=240371639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,976:0,65,255:24,0 chr1 240371640 . G . PASS END=240371640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,753:0,28,255:23,0 chr1 240371641 . C . PASS END=240371644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr1 240371645 . C . PASS END=240371645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr1 240371646 . T . PASS END=240371646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:25,0 chr1 240371647 . C . PASS END=240371647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr1 240371648 . T . PASS END=240371649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,811:0,36,255:24,0 chr1 240371650 . C . PASS END=240371651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:24,0 chr1 240371652 . T . PASS END=240371652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,701:0,12,255:23,0 chr1 240371653 . G . PASS END=240371653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr1 240371654 . G . PASS END=240371654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:25,0 chr1 240371655 . A . PASS END=240371656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,998:0,48,255:25,0 chr1 240371657 . T . PASS END=240371658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:27:0,70,986:0,70,255:24,0 chr1 240371659 . G . PASS END=240371659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr1 240371660 . G . PASS END=240371660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 240371661 . A . LowGQ END=240371661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,759:27,0,255:23,0 chr1 240371662 . A . PASS END=240371662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr1 240371663 . T . PASS END=240371663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,886:0,29,255:24,0 chr1 240371664 . A . PASS END=240371666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:25,0 chr1 240371667 . T . PASS END=240371667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:24,0 chr1 240371668 . C . PASS END=240371669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:25,0 chr1 240371670 . T . PASS END=240371670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,883:0,20,255:24,0 chr1 240371671 . C . PASS END=240371672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:25,0 chr1 240371673 . G . PASS END=240371673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,845:0,20,255:23,0 chr1 240371674 . C . PASS END=240371675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:24,0 chr1 240371676 . C . PASS END=240371676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:22,0 chr1 240371677 . C . PASS END=240371678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr1 240371679 . T . PASS END=240371679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,823:0,26,255:21,0 chr1 240371680 . C . PASS END=240371680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,64,255:20,0 chr1 240371681 . T . PASS END=240371681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,868:0,26,255:21,0 chr1 240371682 . A . PASS END=240371682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:21,0 chr1 240371683 . C . PASS END=240371683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:20,0 chr1 240371684 . C . PASS END=240371684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:21,0 chr1 240371685 . T . LowGQ END=240371685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,562:3,0,255:19,0 chr1 240371686 . G . PASS END=240371686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr1 240371687 . G . PASS END=240371687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,796:0,39,255:20,0 chr1 240371688 . A . PASS END=240371688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:20,0 chr1 240371689 . G . PASS END=240371689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 240371690 . T . PASS END=240371690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,704:0,19,255:19,0 chr1 240371691 . G . PASS END=240371692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,782:0,30,255:20,0 chr1 240371693 . G . PASS END=240371693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 240371694 . A . LowGQ END=240371694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,599:17,0,255:17,0 chr1 240371695 . A . PASS END=240371695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:18,0 chr1 240371696 . T . PASS END=240371707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:40:19:0,40,627:0,40,255:18,0 chr1 240371708 . C . PASS END=240371717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,37,255:13,0 chr1 240371718 . T . LowGQ END=240371718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,520:1,0,255:12,0 chr1 240371719 . G . PASS END=240371719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 240371720 . G . PASS END=240371722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr1 240371723 . C . PASS END=240371723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 240371724 . T . LowGQ END=240371724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr1 240371725 . G . PASS END=240371730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 240371731 . C . PASS END=240371731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr1 240371732 . C . PASS END=240371738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 240371739 . T . PASS END=240371739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 240371740 . C . PASS END=240371741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 240371742 . T . PASS END=240371742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr1 240371743 . C . PASS END=240371745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:12,0 chr1 240371746 . T . PASS END=240371746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr1 240371747 . T . PASS END=240371747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 240371748 . G . PASS END=240371748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 240371749 . C . PASS END=240371751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr1 240371752 . G . PASS END=240371752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:11,0 chr1 240371753 . G . PASS END=240371753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr1 240371754 . T . PASS END=240371756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr1 240371757 . G . PASS END=240371769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr1 240371770 . G . PASS END=240371770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 240371771 . C . PASS END=240371781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:16,0 chr1 240371782 . C . PASS END=240371782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr1 240371783 . C . PASS END=240371788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,659:0,41,255:16,0 chr1 240371789 . C . PASS END=240371789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 240371790 . T . PASS END=240371797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,668:0,51,255:18,0 chr1 240371798 . G . PASS END=240371801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 240371802 . A . PASS END=240371815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr1 240371816 . C . PASS END=240371835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:26,0 chr1 240371836 . G . PASS END=240371836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,976:0,45,255:26,0 chr1 240371837 . G . PASS END=240371838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 240371839 . C . PASS END=240371839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:29,0 chr1 240371840 . C . PASS END=240371848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr1 240371849 . T . PASS END=240371849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 240371850 . C . PASS END=240371855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 240371856 . A . PASS END=240371856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:26,0 chr1 240371857 . G . PASS END=240371903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1109:0,80,255:38,0 chr1 240371904 . T . PASS END=240371904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1286:0,59,255:35,0 chr1 240371905 . C . PASS END=240372026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1157:0,87,255:40,0 chr1 240372027 . T . PASS END=240372027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr1 240372028 . A . PASS END=240372031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1149:0,93,255:31,0 chr1 240372032 . G . PASS END=240372032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr1 240374391 . A . PASS END=240374535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:32:0,87,1153:0,96,255:40,0 chr1 240374542 . A . PASS END=240374542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 240397551 . G . PASS END=240397628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,100,1482:0,100,255:40,0 chr1 240402939 . T . PASS END=240402944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,198,255:40,0 chr1 240408863 . A . PASS END=240408865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,114,1710:0,123,255:39,0 chr1 240421245 . G . PASS END=240421332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:67:0,120,1800:0,193,255:40,0 chr1 240458122 . C . PASS END=240458208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:78:0,120,1800:0,201,255:40,0 chr1 240492376 . A . PASS END=240492467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,156,255:40,0 chr1 240492639 . G . PASS END=240492696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,104,1480:0,104,255:40,0 chr1 240492697 . T . PASS END=240492733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,123,255:40,0 chr1 240492734 . G A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=3.735;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,29,0:0.580,0.000:50:6,15,0:15,14,0:47:85,0,48,1008,742,1750:255,0,255:20,0:5.0000e+01,7.7917e-05,5.0986e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,8,8,21:6,15,20,9 chr1 240492735 . T . PASS END=240492768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,111,1710:0,111,255:40,0 chr1 240493903 . A . PASS END=240493911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1078:0,90,255:34,0 chr1 240493912 . A . PASS END=240493912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1126:0,71,255:32,0 chr1 240493913 . A . PASS END=240493926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1154:0,86,255:40,0 chr1 240493927 . A . PASS END=240493927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:77:49:0,77,1492:0,77,255:40,0 chr1 240493928 . T . PASS END=240494049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,134,255:40,0 chr1 240497187 . G . PASS END=240497227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:74:0,120,1800:0,197,255:40,0 chr1 240497228 . T . PASS END=240497246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,215,255:40,0 chr1 240497409 . G . PASS END=240497529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,99,1629:0,99,255:40,1 chr1 240519116 . C . PASS END=240519201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,106,1789:0,106,255:40,0 chr1 240519202 . A . PASS END=240519206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:54:0,90,1800:0,90,255:40,0 chr1 240519207 . A . PASS END=240519208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:68:54:0,68,1754:0,68,255:40,0 chr1 240555811 . C . PASS END=240555862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:71:0,120,1800:0,209,255:40,0 chr1 240601361 . C . PASS END=240601510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:85:41:0,85,1308:0,85,255:40,0 chr1 240635652 . A . PASS END=240635753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,185,255:40,0 chr1 240637428 . A . PASS END=240637454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:80:0,120,1800:0,241,255:40,0 chr1 240656269 . T . PASS END=240656272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr1 240656273 . T . PASS END=240656273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 240656274 . G . PASS END=240656291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:13,0 chr1 240656292 . G . PASS END=240656298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 240656299 . G . PASS END=240656299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 240656300 . G . PASS END=240656332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,639:0,51,255:19,0 chr1 240656333 . T . PASS END=240656338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr1 240656339 . A . PASS END=240656339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 240656340 . G . PASS END=240656343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 240656344 . G . PASS END=240656347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 240656348 . G . PASS END=240656349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 240656350 . T . PASS END=240656352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 240656353 . G . PASS END=240656364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr1 240656365 . G . PASS END=240656367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 240656368 . C . PASS END=240656371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 240656372 . A . PASS END=240656376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 240656377 . C . PASS END=240656380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 240656381 . A . PASS END=240656413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,660:0,43,255:19,0 chr1 240656414 . G . PASS END=240656425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 240656426 . A . PASS END=240656427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 240656428 . G . PASS END=240656430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 240656431 . C . PASS END=240656431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr1 240656432 . T . PASS END=240656438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 240656439 . C . PASS END=240656467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr1 240656468 . G . PASS END=240656474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 240656475 . A . PASS END=240656483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 240656484 . A . PASS END=240656491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr1 240656492 . C . PASS END=240656508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 240656509 . G . PASS END=240656509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 240656510 . C . PASS END=240656510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 240656511 . T . PASS END=240656512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 240656513 . C . PASS END=240656513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr1 240656514 . G . PASS END=240656516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 240656517 . A . PASS END=240656518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 240656519 . C . PASS END=240656528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 240656529 . T . PASS END=240656529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 240656530 . C . PASS END=240656534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 240656535 . T . PASS END=240656535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 240656536 . C . PASS END=240656540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 240656541 . G . PASS END=240656541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr1 240656542 . C . PASS END=240656553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr1 240656554 . C . PASS END=240656561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr1 240656562 . A . PASS END=240656564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 240656565 . C . PASS END=240656566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 240656567 . C . PASS END=240656567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 240656568 . T . PASS END=240656598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,698:0,57,255:19,0 chr1 240656599 . G . PASS END=240656601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 240656602 . C . PASS END=240656613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 240656614 . G . PASS END=240656620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr1 240656621 . A . PASS END=240656621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 240656622 . C . PASS END=240656636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:26,0 chr1 240656637 . G . PASS END=240656642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 240656643 . A . PASS END=240656646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 240656647 . C . PASS END=240656652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 240656653 . G . PASS END=240656653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 240656654 . T . PASS END=240656655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr1 240656656 . G . PASS END=240656656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 240656657 . T . PASS END=240656657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 240656658 . T . PASS END=240656659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 240656660 . C . PASS END=240656776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1184:0,82,255:40,0 chr1 240694935 . C . PASS END=240694967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:59:0,90,1350:0,151,255:40,0 chr1 240694968 . T . PASS END=240694968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:62:0,90,1350:0,186,255:30,0 chr1 240694969 . C . PASS END=240694976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:60:62:0,60,900:0,186,255:24,0 chr1 240694977 . A . PASS END=240694985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:42:57:0,42,630:0,135,255:19,0 chr1 240694986 . A . PASS END=240694987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:30:57:0,30,450:0,154,255:12,0 chr1 240714030 . A . PASS END=240714030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr1 240721552 . C . PASS END=240721552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,164,255:40,0 chr1 240939463 . T . PASS END=240939513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,177,255:40,0 chr1 240963947 . T . PASS END=240964021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:40:0,88,1457:0,88,255:40,0 chr1 240964755 . C . PASS END=240964808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:91:0,120,1800:0,247,255:40,0 chr1 240966204 . C . PASS END=240966293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:48:0,113,1717:0,113,255:40,0 chr1 240969440 . C . PASS END=240969626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:34:0,87,1305:0,95,255:40,0 chr1 240975218 . C . PASS END=240975250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,110,1508:0,110,255:40,0 chr1 240975251 . A . PASS END=240975343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:38:0,98,1380:0,98,255:40,0 chr1 240976918 . C . PASS END=240977028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:37:0,95,1333:0,95,255:40,0 chr1 240978016 . C . PASS END=240978077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:70:0,120,1800:0,203,255:40,0 chr1 240979617 . C . PASS END=240979715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:58:0,120,1800:0,174,255:40,0 chr1 240990398 . C . PASS END=240990472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:80:0,120,1800:0,227,255:40,0 chr1 241031887 . C . PASS END=241031968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,124,255:40,0 chr1 241032066 . A . PASS END=241032152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,112,1723:0,112,255:40,0 chr1 241033355 . A . PASS END=241033419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,141,255:40,1 chr1 241094017 . C . PASS END=241094068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:73:0,120,1800:0,198,255:40,0 chr1 241099900 . T . PASS END=241099900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr1 241099901 . T . PASS END=241099901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 241099902 . G . PASS END=241100006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1147:0,80,255:40,0 chr1 241146379 . C . PASS END=241146429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:75:0,120,1800:0,189,255:40,0 chr1 241261966 . C . PASS END=241262062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:61:0,120,1800:0,158,255:40,0 chr1 241518999 . C . PASS END=241519060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:34:0,99,1485:0,102,255:40,0 chr1 241519061 . T . PASS END=241519076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:37:0,96,1440:0,111,255:40,0 chr1 241660862 . T . PASS END=241660862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 241660917 . C . PASS END=241660917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr1 241661026 . A . PASS END=241661026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr1 241661036 . C . PASS END=241661036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr1 241661128 . T . PASS END=241661272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:47:0,120,1800:0,141,255:40,1 chr1 241663731 . A . PASS END=241663731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 241663735 . A . PASS END=241663735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 241663736 . C . PASS END=241663736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:27,0 chr1 241663737 . C . PASS END=241663856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:28:0,81,1103:0,84,255:40,0 chr1 241663857 . C . PASS END=241663859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:51:0,83,1679:0,83,255:40,0 chr1 241663860 . G . PASS END=241663860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:65:51:0,65,1651:0,65,255:40,0 chr1 241663861 . C . PASS END=241663861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:51:0,120,1709:0,120,255:40,0 chr1 241663862 . A . PASS END=241663862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:67:49:0,67,1535:0,67,255:39,0 chr1 241663863 . G . PASS END=241663879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:42:0,87,1305:0,87,255:40,0 chr1 241663880 . A . PASS END=241663880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:12:41:0,12,1136:0,12,255:26,0 chr1 241663881 . C . PASS END=241663881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:58:41:0,58,1163:0,58,255:24,0 chr1 241663882 . A . PASS END=241663882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:16:37:0,16,1014:0,16,255:25,0 chr1 241663883 . T . PASS END=241663887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:72:37:0,72,1080:0,78,255:26,0 chr1 241663888 . A . LowGQ END=241663888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,864:69,0,255:21,0 chr1 241663889 . A . PASS END=241663889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:30:37:0,30,944:0,30,255:22,0 chr1 241663890 . T . PASS END=241663890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1035:0,108,255:23,0 chr1 241663891 . C . PASS END=241663891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:24:36:0,24,841:0,24,255:20,0 chr1 241663894 . T . PASS END=241663895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:57:36:0,57,855:0,75,255:19,0 chr1 241663897 . G . PASS END=241663898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:45:34:0,45,675:0,63,255:18,0 chr1 241663902 . TGA T, 6.21 DRAGENIndelHardQUAL DP=32;MQ=211.21;MQRankSum=1.269;ReadPosRankSum=0.352;FractionInformativeReads=0.688;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,7,0:0.318,0.000:22:11,5,0:4,2,0:6:8,0,47,147,147,147:169,0,255:7,9:6.2103e+00,1.1880e+00,5.1188e+01,1.7995e+02,1.8295e+02,1.8296e+02:0.00,3.00,6.01,34.77,37.77,37.78:8,7,2,5:10,5,4,3 chr1 241665742 . C . PASS END=241665855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:44:0,90,1350:0,123,255:40,0 chr1 241665856 . T . PASS END=241665871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:24:0,66,990:0,72,255:25,0 chr1 241665873 . T . PASS END=241665873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 241665877 . G . PASS END=241665877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 241667341 . C . PASS END=241667480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:37:0,93,1395:0,100,255:40,0 chr1 241667481 . C . PASS END=241667481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:30,0 chr1 241667482 . T . PASS END=241667485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:32,0 chr1 241667486 . C . PASS END=241667487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1286:0,92,255:31,0 chr1 241667488 . A . PASS END=241667494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:26,0 chr1 241667495 . C . PASS END=241667495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 241667496 . A . PASS END=241667516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,923:0,64,255:27,0 chr1 241667517 . T . PASS END=241667518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr1 241667519 . T . PASS END=241667522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 241667523 . C T, 49.31 PASS DP=25;MQ=201.89;MQRankSum=-1.560;ReadPosRankSum=2.272;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:9,4,0:5,7,0:48:84,0,50,393,472,865:255,0,255:14,0:4.9309e+01,7.2740e-05,5.3000e+01,3.9342e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,2,9:9,5,7,4 chr1 241667524 . G . PASS END=241667527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 241667528 . C . PASS END=241667546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:19,0 chr1 241667548 . A . PASS END=241667548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 241667550 . A . PASS END=241667550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 241669295 . T . PASS END=241669295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1344:0,114,255:38,0 chr1 241669299 . T . PASS END=241669299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1407:0,117,255:39,0 chr1 241669302 . C . PASS END=241669468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:39:0,100,1350:0,100,255:40,0 chr1 241669470 . T . PASS END=241669470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 241671889 . T . PASS END=241671889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr1 241671899 . A . PASS END=241671909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1125:0,80,255:30,0 chr1 241671910 . A . PASS END=241671910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr1 241671911 . G . PASS END=241672067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1156:0,83,255:40,0 chr1 241672068 . A . PASS END=241672068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:27,0 chr1 241672069 . A . PASS END=241672069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 241672070 . A . PASS END=241672070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 241672071 . A . PASS END=241672073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 241672074 . A . PASS END=241672086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:24,0 chr1 241672087 . T . PASS END=241672087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,713:0,39,255:19,0 chr1 241672089 . T . PASS END=241672090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 241675262 . C . PASS END=241675264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,125,255:40,0 chr1 241675266 . C . PASS END=241675445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:95:47:0,95,1800:0,95,255:40,0 chr1 241675458 . T . PASS END=241675458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 241676897 . T . PASS END=241676898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1459:0,117,255:39,0 chr1 241676900 . T . PASS END=241676997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:41:0,93,1455:0,93,255:40,0 chr1 241676998 . C . PASS END=241677013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:36:0,93,1395:0,108,255:36,0 chr1 241677015 . T . PASS END=241677015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr1 241680471 . A . PASS END=241680471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr1 241680481 . C . PASS END=241680593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:37:0,95,1341:0,95,255:40,0 chr1 241680594 . A . PASS END=241680594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr1 241680595 . T . PASS END=241680603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:34,0 chr1 241680604 . A . PASS END=241680604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr1 241680605 . A . PASS END=241680617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 241680619 . A . PASS END=241680619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 241682886 . C . PASS END=241682886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr1 241682891 . C . PASS END=241682897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr1 241682898 . G . PASS END=241682898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 241682899 . C . PASS END=241682916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:30,0 chr1 241682917 . A . PASS END=241682917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 241682918 . C . PASS END=241683014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1172:0,83,255:35,0 chr1 241683015 . C . PASS END=241683022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:35:0,66,990:0,66,255:25,0 chr1 241683025 . T . PASS END=241683025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,102,255:23,0 chr1 241683033 . G . PASS END=241683033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr1 241683036 . C . PASS END=241683036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 241683070 . C . PASS END=241683070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 241683079 . G . PASS END=241683079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 241695625 . A . PASS END=241695754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:96:35:0,96,1404:0,101,255:40,0 chr1 241695755 . C . PASS END=241695791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:67:0,120,1800:0,183,255:40,0 chr1 241695792 . T C, 50.00 PASS DP=66;MQ=250.00;MQRankSum=6.860;ReadPosRankSum=5.686;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,39,0:0.591,0.000:66:15,21,0:12,18,0:47:85,0,47,1379,959,2338:255,0,255:22,0:5.0000e+01,8.4907e-05,5.0198e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,15,15,24:14,13,17,22 chr1 241695793 . G . PASS END=241695798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,146,255:40,0 chr1 241712129 . G . PASS END=241712198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,169,255:40,0 chr1 241712977 . A . PASS END=241713074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,99,1485:0,122,255:40,0 chr1 241714255 . A . PASS END=241714344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,108,1613:0,108,255:40,0 chr1 241718912 . T . PASS END=241718960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:90:0,120,1800:0,223,255:40,0 chr1 241723965 . C . PASS END=241724052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,122,255:40,0 chr1 241725467 . A . PASS END=241725632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,114,1710:0,123,255:40,0 chr1 241728287 . T . PASS END=241728358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,1:129:99:103:0,120,1800:0,255,255:40,0 chr1 241729791 . A . PASS END=241729912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,144,255:40,0 chr1 241731800 . G . PASS END=241731947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:36:0,90,1402:0,90,255:40,0 chr1 241749981 . G . PASS END=241750038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:67:0,120,1800:0,158,255:40,0 chr1 241752050 . G . PASS END=241752132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,105,1575:0,157,255:40,0 chr1 241753314 . A . PASS END=241753415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,182,255:40,0 chr1 241753506 . G . PASS END=241753565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:51:0,120,1774:0,120,255:40,0 chr1 241755255 . G . PASS END=241755264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1003:0,84,255:30,0 chr1 241755265 . A . PASS END=241755265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 241755266 . A . PASS END=241755270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:32,0 chr1 241755271 . T . PASS END=241755271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr1 241755272 . C . PASS END=241755310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1037:0,80,255:40,0 chr1 241755311 . C . PASS END=241755347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,128,255:40,0 chr1 241755348 . C T, 32.94 PASS DP=50;MQ=249.84;MQRankSum=4.656;ReadPosRankSum=2.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,14,0:0.280,0.000:50:22,9,0:14,5,0:33:68,0,50,501,1277,1778:255,0,255:33,0:3.2941e+01,2.2286e-03,5.3002e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,16,7,7:18,18,10,4 chr1 241755349 . G . PASS END=241755385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:39:0,87,1376:0,87,255:40,0 chr1 241755386 . G . PASS END=241755416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:35,0 chr1 241755417 . G . PASS END=241755429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:23,0 chr1 241755430 . A . PASS END=241755430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 241755431 . A . PASS END=241755433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 241755434 . T . PASS END=241755438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,715:0,49,255:19,0 chr1 241755439 . A . PASS END=241755439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 241755440 . T . PASS END=241755440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,735:0,39,255:19,0 chr1 241755441 . C . PASS END=241755441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr1 241755442 . T . PASS END=241755443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 241755444 . A . PASS END=241755444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,829:0,41,255:20,0 chr1 241755445 . T . PASS END=241755445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,758:0,39,255:19,0 chr1 241755446 . T . PASS END=241755450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr1 241755451 . G . PASS END=241755451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 241755452 . G . PASS END=241755452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:19,0 chr1 241755453 . T . PASS END=241755455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,53,255:18,0 chr1 241756666 . G . PASS END=241756699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:48:0,120,1800:0,123,255:40,0 chr1 241757730 . C . PASS END=241757735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr1 241757736 . A . PASS END=241757736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr1 241757737 . G . PASS END=241757751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,878:0,72,255:26,0 chr1 241757752 . A . PASS END=241757757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:29,0 chr1 241757758 . A . PASS END=241757758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,985:0,63,255:30,0 chr1 241757759 . C . PASS END=241757966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1131:0,80,255:40,0 chr1 241757967 . C . PASS END=241757977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:67:28:0,67,970:0,67,255:26,0 chr1 241757978 . A . PASS END=241757979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 241757980 . A . PASS END=241757980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 241757981 . G . PASS END=241757987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr1 241757988 . T . PASS END=241757993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr1 241761048 . C . PASS END=241761299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:86:30:0,86,1052:0,86,255:40,0 chr1 241767562 . C . PASS END=241767562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 241767563 . A . PASS END=241767563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 241767564 . T . PASS END=241767566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 241767567 . G . PASS END=241767567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr1 241767568 . A . PASS END=241767572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:26,0 chr1 241767573 . A . PASS END=241767575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr1 241767576 . A . PASS END=241767576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:30,0 chr1 241767577 . T . PASS END=241767581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:33:0,95,1363:0,95,255:36,0 chr1 241767582 . T . PASS END=241767582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1266:0,37,255:34,0 chr1 241767583 . A . PASS END=241767583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr1 241767584 . T . PASS END=241767584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr1 241767585 . G . PASS END=241767645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,108,1460:0,108,255:40,0 chr1 241767646 . C . PASS END=241767646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:61:49:0,61,1651:0,61,255:40,0 chr1 241767647 . A . PASS END=241767735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:34:0,81,1215:0,89,255:40,0 chr1 241767736 . G . PASS END=241767741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:74:29:0,74,1084:0,74,255:26,0 chr1 241767742 . T . PASS END=241767743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 241767744 . C . PASS END=241767746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr1 241767747 . C . PASS END=241767772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1109:0,80,255:32,0 chr1 241767773 . A . PASS END=241767773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:32,0 chr1 241767774 . T . PASS END=241767806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1202:0,86,255:34,0 chr1 241767807 . T . PASS END=241767807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:30,0 chr1 241767808 . G . PASS END=241767810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 241767811 . C . PASS END=241767856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,853:0,69,255:26,0 chr1 241767857 . G . PASS END=241767857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 241767858 . T . PASS END=241767858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 241767859 . T . PASS END=241767860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 241767861 . G . PASS END=241767873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 241767874 . A . PASS END=241767874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 241767875 . A . PASS END=241767878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 241767879 . T . PASS END=241767879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 241767880 . C . PASS END=241767881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 241779156 . C . PASS END=241779168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:19,0 chr1 241779169 . G . PASS END=241779200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:21:0,61,770:0,61,255:26,0 chr1 241779201 . G . PASS END=241779211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 241779212 . T . PASS END=241779216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr1 241779217 . G . PASS END=241779217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr1 241779218 . C . PASS END=241779219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 241779220 . T . PASS END=241779220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr1 241779221 . G . PASS END=241779224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 241779225 . C . PASS END=241779225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr1 241779226 . T . PASS END=241779226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr1 241779227 . G . PASS END=241779227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 241779228 . G . PASS END=241779235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 241779236 . A . PASS END=241779238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 241797098 . C . PASS END=241797101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr1 241797102 . T . PASS END=241797106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 241797107 . A . PASS END=241797107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr1 241797108 . A . PASS END=241797109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 241797110 . G . PASS END=241798593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:33:0,90,1189:0,90,255:40,0 chr1 241798594 . G . PASS END=241798630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,110,1800:0,110,255:40,0 chr1 241798631 . C T, 46.71 PASS DP=54;MQ=250.00;MQRankSum=6.188;ReadPosRankSum=4.674;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,22,0:0.407,0.000:54:15,16,0:17,6,0:46:81,0,50,721,1136,1858:255,0,255:30,0:4.6714e+01,1.1442e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,20,8,14:11,21,10,12 chr1 241798632 . G . PASS END=241798668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,123,255:40,0 chr1 241798669 . C . PASS END=241799099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:39:0,96,1381:0,103,255:40,0 chr1 241799335 . T . PASS END=241799375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,148,255:40,0 chr1 241803184 . C . PASS END=241803188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr1 241803189 . A . PASS END=241803189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr1 241803190 . G . PASS END=241803204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,660:0,51,255:18,0 chr1 241803205 . C . PASS END=241803205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr1 241803206 . G . PASS END=241803217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr1 241803218 . G . PASS END=241803224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 241803225 . G . PASS END=241803231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 241803232 . A . PASS END=241803237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr1 241803238 . A . PASS END=241803243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 241803244 . T . PASS END=241803253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 241803254 . G . PASS END=241803254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr1 241803255 . G . PASS END=241803256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 241803257 . C . PASS END=241803257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 241803258 . A . PASS END=241803258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 241803259 . C . PASS END=241803262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr1 241803263 . G . PASS END=241803265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 241803266 . A . PASS END=241803266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 241803267 . A . PASS END=241803278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 241803279 . A . PASS END=241803279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 241803280 . A . PASS END=241803287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 241803288 . A . PASS END=241803288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr1 241803289 . C . PASS END=241803289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr1 241803290 . C . PASS END=241803290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 241803291 . A . PASS END=241803291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 241803292 . G . PASS END=241803300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:24,0 chr1 241803301 . T . PASS END=241803301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr1 241803302 . G . PASS END=241803308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 241803309 . A . PASS END=241803309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:22,0 chr1 241803310 . T . PASS END=241803329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,892:0,61,255:23,0 chr1 241803330 . G . PASS END=241803330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 241803331 . T . PASS END=241803334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 241803335 . A . PASS END=241803335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:21,0 chr1 241803336 . G . PASS END=241803338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 241803339 . C . PASS END=241803339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 241803340 . G . PASS END=241803349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr1 241803350 . G . PASS END=241803350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 241803351 . A . PASS END=241803375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,860:0,69,255:25,0 chr1 241803376 . G . PASS END=241803376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:22,0 chr1 241803377 . C . PASS END=241803397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr1 241803398 . C . PASS END=241803424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,52,255:18,0 chr1 241803425 . C . PASS END=241803441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:13,0 chr1 241803442 . C . PASS END=241803458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,213:8,0 chr1 241803459 . G . PASS END=241803459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 241803460 . C . PASS END=241803465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,227:0,24,227:8,0 chr1 241803466 . T . PASS END=241803466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr1 241803467 . C . PASS END=241803475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 241803476 . C . PASS END=241803543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr1 241803544 . T . LowGQ END=241803556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,0:5:0:3:0,0,0:0,9,94:3,0 chr1 241815787 . A . PASS END=241815931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,100,1603:0,100,255:40,0 chr1 241823832 . A . PASS END=241823892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:31:0,93,1117:0,93,255:40,0 chr1 241823893 . G . PASS END=241823929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,147,255:40,0 chr1 241823930 . A G, 48.31 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=4.031;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:12,11,0:16,10,0:47:83,0,50,735,963,1698:255,0,255:25,0:4.8308e+01,8.5942e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,13,10,11:17,11,14,7 chr1 241823931 . A . PASS END=241823962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:41:0,87,1305:0,118,255:40,0 chr1 241827377 . A . PASS END=241827400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:110:0,120,1800:0,255,255:40,0 chr1 241834376 . A . PASS END=241834478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:43:0,108,1503:0,108,255:40,0 chr1 241837946 . G . PASS END=241838017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,164,255:40,0 chr1 241838018 . A . PASS END=241838049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,138,255:40,0 chr1 241841489 . A . PASS END=241841518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,223,255:40,0 chr1 241842787 . G . PASS END=241842897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:46:0,102,1530:0,122,255:40,0 chr1 241846789 . G . PASS END=241846817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:35:0,90,1288:0,90,255:39,0 chr1 241846818 . T . PASS END=241846818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1472:0,74,255:36,0 chr1 241846819 . C . PASS END=241846819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1545:0,90,255:37,0 chr1 241846820 . A . PASS END=241846820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1557:0,66,255:38,0 chr1 241846821 . C . PASS END=241846825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,105,1693:0,105,255:40,0 chr1 241846826 . T . PASS END=241846827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:73:50:0,73,1731:0,73,255:40,0 chr1 241846828 . C . PASS END=241846828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:21:51:0,21,1667:0,21,255:40,1 chr1 241846829 . T . PASS END=241846980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:51:0,117,1755:0,118,255:40,1 chr1 241846981 . T . PASS END=241847003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,108,1620:0,126,255:40,0 chr1 241850763 . T . PASS END=241850897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:88:45:0,88,1467:0,88,255:40,0 chr1 241875104 . G . PASS END=241875183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,159,255:40,0 chr1 241886599 . G . PASS END=241886721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:41:0,93,1411:0,93,255:40,0 chr1 241886722 . G . PASS END=241886722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1488:0,79,255:35,0 chr1 241886723 . C . PASS END=241886734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:39:0,93,1395:0,107,255:37,0 chr1 241886735 . A . PASS END=241886735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1343:0,65,255:31,0 chr1 241886736 . A . PASS END=241886738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr1 241901665 . G . PASS END=241901791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,99,1439:0,104,255:40,0 chr1 241904818 . G . PASS END=241904966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:43:0,113,1588:0,113,255:40,0 chr1 241907695 . G . PASS END=241907818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:37:0,94,1264:0,94,255:40,0 chr1 241912849 . G . PASS END=241912854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,821:0,66,255:26,0 chr1 241912855 . T . PASS END=241912866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr1 241912867 . A . PASS END=241912867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:28,0 chr1 241912868 . C . PASS END=241912869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 241912870 . T . PASS END=241912870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,942:0,59,255:28,0 chr1 241912871 . T . PASS END=241912871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 241912872 . G . PASS END=241912872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:28,0 chr1 241912873 . G . PASS END=241912940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1125:0,90,255:37,0 chr1 241912941 . C . PASS END=241912941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:33,0 chr1 241912942 . G . PASS END=241912965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1287:0,92,255:38,0 chr1 241912966 . A . PASS END=241912966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1166:0,67,255:30,0 chr1 241912967 . A . PASS END=241912986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,88,255:32,0 chr1 241912987 . T . PASS END=241912996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:26,0 chr1 241912997 . G . PASS END=241913018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,675:0,48,255:18,0 chr1 241913019 . A . PASS END=241913021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 241913022 . C . PASS END=241913024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 241920585 . G . PASS END=241920754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:33:0,89,1189:0,89,255:40,0 chr1 241920755 . T . PASS END=241920755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr1 241920756 . A . PASS END=241920761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1225:0,89,255:32,0 chr1 241929520 . A . PASS END=241929653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:68:0,120,1800:0,157,255:40,0 chr1 241932706 . G . PASS END=241932807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:49:0,100,1759:0,100,255:40,0 chr1 241933923 . G . PASS END=241933992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,126,255:40,0 chr1 241934634 . T . PASS END=241934636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:93:0,120,1800:0,255,255:40,0 chr1 241934963 . G . PASS END=241934999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,185,255:40,0 chr1 241936094 . G . PASS END=241936214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:35:0,87,1290:0,95,255:40,0 chr1 241936215 . C . PASS END=241936215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 241936216 . C . PASS END=241936216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 241936217 . G . PASS END=241936217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 241936218 . C . PASS END=241936221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:28,0 chr1 241936222 . T . PASS END=241936233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr1 241938407 . G . PASS END=241938512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,120,1800:0,122,255:40,0 chr1 241943306 . A . PASS END=241943364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:76:0,120,1800:0,197,255:40,0 chr1 241946574 . A . PASS END=241946683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:42:0,96,1361:0,96,255:40,0 chr1 241951151 . G . PASS END=241951336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:89:35:0,89,1249:0,89,255:40,0 chr1 241953893 . A . PASS END=241953955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:64:0,120,1800:0,176,255:40,0 chr1 241953956 . G . PASS END=241953988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:64:0,102,1530:0,157,255:40,0 chr1 241953989 . T . PASS END=241953991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:42:64:0,42,630:0,176,255:14,0 chr1 241953992 . T . PASS END=241953993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:36:64:0,36,540:0,175,255:11,0 chr1 241953994 . C . PASS END=241953998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:24:62:0,24,360:0,147,255:9,0 chr1 241958509 . A . PASS END=241958589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,117,1647:0,120,255:40,0 chr1 241959559 . A . PASS END=241959670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1170:0,83,255:40,0 chr1 241959671 . A . PASS END=241959676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr1 241964434 . G . PASS END=241964517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,152,255:40,0 chr1 242013728 . A . PASS END=242013731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 242013732 . G . PASS END=242013764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr1 242013765 . C . PASS END=242013835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1064:0,80,255:32,0 chr1 242013836 . A . PASS END=242013836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr1 242013837 . A . PASS END=242013861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr1 242013862 . A . PASS END=242013872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:28:0,63,883:0,70,255:27,0 chr1 242013873 . G . PASS END=242013876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,61,255:19,0 chr1 242013877 . A . PASS END=242013878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:20,0 chr1 242013879 . C . PASS END=242013881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,59,255:18,0 chr1 242013882 . C . PASS END=242013884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 242013885 . A . PASS END=242013888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 242015594 . G . PASS END=242015713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,152,255:40,0 chr1 242016660 . A . PASS END=242016753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1141:0,81,255:40,0 chr1 242016754 . A . PASS END=242016754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:29,0 chr1 242016755 . C . PASS END=242016762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1239:0,86,255:32,0 chr1 242016763 . A . PASS END=242016763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:29,0 chr1 242016764 . T . PASS END=242016771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,83,255:30,0 chr1 242016772 . A . PASS END=242016772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,944:0,62,255:26,0 chr1 242016773 . A . PASS END=242016776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 242016777 . A . PASS END=242016777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr1 242016778 . A . PASS END=242016783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 242020647 . G . PASS END=242020784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,111,1665:0,128,255:40,0 chr1 242021808 . G . PASS END=242021983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,1215:0,83,255:40,0 chr1 242021984 . A . PASS END=242021997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,837:0,66,255:22,0 chr1 242021998 . C . PASS END=242021998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr1 242021999 . C . PASS END=242021999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 242022000 . A . PASS END=242022018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,645:0,41,255:19,0 chr1 242022019 . A . PASS END=242022019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:14,0 chr1 242022020 . G . PASS END=242022020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 242023819 . G . PASS END=242024001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:84:41:0,84,1260:0,123,255:40,0 chr1 242024002 . G . PASS END=242024006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:39:0,72,1080:0,101,255:26,0 chr1 242024708 . A . PASS END=242024804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:56:0,120,1800:0,135,255:40,0 chr1 242029956 . A . PASS END=242030033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:51:0,119,1800:0,119,255:40,0 chr1 242030132 . C . PASS END=242030337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:35:0,81,1219:0,81,255:40,0 chr1 242030338 . T . PASS END=242030338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1174:0,74,255:33,0 chr1 242030339 . G . PASS END=242030354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1148:0,85,255:33,0 chr1 242030355 . G . PASS END=242030357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr1 242035334 . C . PASS END=242035335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr1 242035336 . G . PASS END=242035336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 242035337 . A . PASS END=242035337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,648:0,35,255:19,0 chr1 242035338 . G . PASS END=242035338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 242035339 . C . PASS END=242035339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:21,0 chr1 242035340 . T . PASS END=242035350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,885:0,64,255:26,0 chr1 242035351 . G . PASS END=242035577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1011:0,81,255:40,0 chr1 242035578 . C . PASS END=242035580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:34:0,63,945:0,89,255:23,0 chr1 242042051 . G . PASS END=242042051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr1 242042052 . T . PASS END=242042052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr1 242042053 . T . PASS END=242042065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,717:0,63,255:26,0 chr1 242042066 . A . PASS END=242042263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:28:0,84,1070:0,84,255:40,0 chr1 242042264 . G . PASS END=242042300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,131,255:40,0 chr1 242042301 . G A, 49.95 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=2.910;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,24,0:0.490,0.000:49:15,13,0:10,11,0:48:85,0,50,801,856,1657:255,0,255:22,0:4.9946e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,11,13:12,13,10,14 chr1 242042302 . A . PASS END=242042338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,116,1619:0,116,255:40,0 chr1 242042339 . T . PASS END=242042507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:43:0,98,1590:0,98,255:40,0 chr1 242042508 . G . PASS END=242042544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,131,255:40,0 chr1 242042545 . A G, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.378;ReadPosRankSum=3.247;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,31,0:0.554,0.000:56:16,11,0:9,20,0:48:85,0,49,1100,849,1950:255,0,255:22,0:5.0000e+01,7.1187e-05,5.1925e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,17,13,18:11,14,15,16 chr1 242042546 . G . PASS END=242042582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,137,255:40,0 chr1 242042583 . T . PASS END=242042621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:40:0,81,1215:0,104,255:40,0 chr1 242042622 . T . PASS END=242042626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:66:39:0,66,990:0,104,255:22,0 chr1 242042627 . T . PASS END=242042632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:28:0,57,855:0,84,255:19,0 chr1 242042633 . C . PASS END=242042635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 242042636 . T . PASS END=242042645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:17,0 chr1 242045218 . G . PASS END=242045237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:52:0,87,1800:0,87,255:40,0 chr1 242045238 . G . PASS END=242045274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,122,255:40,0 chr1 242045275 . C T, 200.03 PASS DP=51;MQ=249.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,26,0:0,25,0:150:238,153,0,1932,153,1932:255,153,0:0,0:2.0003e+02,1.5003e+02,0.0000e+00,4.5000e+02,1.8480e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,31:0,0,27,24 chr1 242045276 . G . PASS END=242045310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:42:0,84,1260:0,102,255:40,0 chr1 242045311 . A . PASS END=242045312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:75:42:0,75,1125:0,126,255:25,0 chr1 242045313 . G . PASS END=242045319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:30:0,69,1035:0,74,255:24,0 chr1 242048615 . G . PASS END=242048616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 242048617 . T . PASS END=242048617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 242048618 . T . PASS END=242048618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr1 242048619 . C . PASS END=242048619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 242048620 . C . PASS END=242048621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr1 242048622 . G . PASS END=242048809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1157:0,81,255:40,0 chr1 242052767 . A . PASS END=242052902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,99,1453:0,104,255:40,0 chr1 242121069 . A . PASS END=242121071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 242121072 . T . PASS END=242121072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 242121073 . C . PASS END=242121111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,33,255:13,0 chr1 242121112 . T . PASS END=242121112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,360:0,22,255:9,0 chr1 242121113 . G . PASS END=242121124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr1 242121125 . C . PASS END=242121125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 242121126 . T . PASS END=242121133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 242121134 . G . PASS END=242121147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:18,0 chr1 242121148 . C . PASS END=242121151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 242121152 . A . PASS END=242121160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 242121161 . G . PASS END=242121162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 242121163 . C . PASS END=242121165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 242121166 . C . PASS END=242121189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr1 242121190 . A . PASS END=242121191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 242121192 . A . PASS END=242121192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,599:0,29,255:17,0 chr1 242121193 . C . PASS END=242121212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,668:0,44,255:19,0 chr1 242121213 . A . PASS END=242121232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:22,0 chr1 242121233 . T . PASS END=242121233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr1 242121234 . G . PASS END=242121244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 242121245 . G . PASS END=242121245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 242121246 . G . PASS END=242121253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:23,0 chr1 242121254 . C . PASS END=242121254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 242121255 . T . PASS END=242121255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 242121256 . C . PASS END=242121256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 242121257 . T . PASS END=242121262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 242121263 . A . PASS END=242121264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr1 242121265 . C . PASS END=242121280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,884:0,69,255:23,0 chr1 242121281 . C . PASS END=242121339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:19,0 chr1 242121340 . A . PASS END=242121340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr1 242121341 . C . PASS END=242121344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr1 242121345 . C . PASS END=242121346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 242121347 . C . PASS END=242121349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 242121350 . T . PASS END=242121352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 242121353 . C . PASS END=242121360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 242121361 . A . PASS END=242121361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr1 242121362 . G . PASS END=242121376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr1 242121377 . T G, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=2.665;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,12,0:0.571,0.000:21:6,4,0:3,8,0:48:85,0,49,429,322,751:255,0,255:9,0:5.0000e+01,7.0410e-05,5.2064e+01,4.2919e+02,3.5668e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,4,8:4,5,6,6 chr1 242121378 . T . PASS END=242121378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr1 242121379 . T . PASS END=242121379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:19,0 chr1 242121380 . T . PASS END=242121384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 242121385 . T . PASS END=242121396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,729:0,57,255:19,0 chr1 242121397 . A . PASS END=242121398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr1 242121399 . G . PASS END=242121414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr1 242121415 . C . PASS END=242121433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr1 242121434 . C . PASS END=242121434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 242121435 . G . PASS END=242121479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr1 242121480 . G . PASS END=242121480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr1 242121481 . C . PASS END=242121500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 242121501 . C . PASS END=242121503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 242121504 . T . PASS END=242121504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 242121505 . G . PASS END=242121528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr1 242121529 . C . PASS END=242121529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr1 242121530 . C . PASS END=242121543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,458:0,36,255:13,0 chr1 242121544 . C . PASS END=242121546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 242121547 . C . PASS END=242121560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 242121561 . G . PASS END=242121562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 242121563 . G . PASS END=242121568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 242121569 . G . PASS END=242121584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr1 242121585 . G . PASS END=242121585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 242121586 . A . PASS END=242121611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr1 242121612 . G . PASS END=242121624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr1 242121625 . A . PASS END=242121625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr1 242121626 . C . PASS END=242121628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 242121629 . T . PASS END=242121629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:20,0 chr1 242121630 . G . PASS END=242121638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr1 242121639 . G . PASS END=242121639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:19,0 chr1 242121640 . C . PASS END=242121649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr1 242121650 . C . PASS END=242121650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 242121651 . C . PASS END=242121654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 242121655 . C . PASS END=242121655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 242121656 . A . PASS END=242121667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,803:0,63,255:23,0 chr1 242121668 . G . PASS END=242121669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 242121670 . C . PASS END=242121741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,839:0,62,255:25,0 chr1 242121742 . T . PASS END=242121742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 242121743 . G . PASS END=242121750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 242121751 . A . PASS END=242121751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 242121752 . G . PASS END=242121752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 242121753 . C . PASS END=242121753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 242121754 . T . PASS END=242121774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 242121775 . T . PASS END=242121856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr1 242121857 . C . PASS END=242121857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 242121858 . T . PASS END=242121872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:16,0 chr1 242121873 . A . PASS END=242121874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 242121875 . C . PASS END=242121876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 242121877 . T . PASS END=242121883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr1 242121884 . G . PASS END=242121886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 242121887 . C . PASS END=242121917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr1 242121918 . G . PASS END=242121932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:19,0 chr1 242121933 . T . PASS END=242121934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:19,0 chr1 242121935 . G . PASS END=242121944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:21,0 chr1 242121945 . G . PASS END=242121947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 242121948 . T . PASS END=242121949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 242121950 . G . PASS END=242121954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 242121955 . T . PASS END=242121964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,978:0,75,255:26,0 chr1 242121965 . G . PASS END=242121968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 242121969 . A . PASS END=242121972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 242121973 . C . PASS END=242121976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 242121977 . T . PASS END=242121977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr1 242121978 . G . PASS END=242121978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 242121979 . G . PASS END=242121985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 242121986 . G . PASS END=242121988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 242121989 . T . PASS END=242121989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr1 242121990 . C . PASS END=242122211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:30:0,90,1080:0,90,255:40,0 chr1 242122212 . A . PASS END=242122212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:79:48:0,79,1364:0,79,255:39,0 chr1 242122213 . C . PASS END=242122357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,100,1344:0,100,255:40,0 chr1 242122358 . A . PASS END=242122358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1394:0,79,255:34,0 chr1 242122359 . A . PASS END=242122364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:97:38:0,97,1313:0,97,255:35,0 chr1 242159465 . C . PASS END=242159480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,738:0,63,255:25,0 chr1 242159481 . G . PASS END=242159493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr1 242159494 . G . PASS END=242159497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 242159498 . G . PASS END=242159516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr1 242159517 . G . PASS END=242159517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr1 242159518 . C . PASS END=242159683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1147:0,80,255:40,0 chr1 242159684 . G . PASS END=242159684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr1 242159685 . C . PASS END=242159687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr1 242161816 . C . PASS END=242161819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:31,0 chr1 242161820 . T . PASS END=242161820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 242161821 . G . PASS END=242161922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:31:0,82,1141:0,82,255:40,0 chr1 242162078 . C . PASS END=242162079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr1 242162080 . G . PASS END=242162081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 242162082 . A . PASS END=242162082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,732:0,34,255:24,0 chr1 242162083 . T . PASS END=242162083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,889:0,67,255:26,0 chr1 242162084 . T . PASS END=242162089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 242162090 . G . PASS END=242162090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr1 242162091 . G . PASS END=242162093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr1 242162094 . A . PASS END=242162094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:1:27:0,1,751:0,1,255:23,0 chr1 242162095 . A . PASS END=242162095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr1 242162096 . C . PASS END=242162096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,823:0,48,255:25,0 chr1 242162097 . T . PASS END=242162099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,870:0,64,255:26,0 chr1 242162100 . G . PASS END=242162101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,815:0,48,255:24,0 chr1 242162102 . C . PASS END=242162108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,886:0,64,255:26,0 chr1 242162109 . C . PASS END=242162109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,768:0,9,255:23,0 chr1 242162110 . C . PASS END=242162111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr1 242162112 . G . PASS END=242162112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,853:0,20,255:23,0 chr1 242162113 . C . PASS END=242162113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr1 242162114 . A . PASS END=242162115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:24,0 chr1 242162116 . C . PASS END=242162116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,876:0,51,255:24,0 chr1 242162117 . T . PASS END=242162117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:6:28:0,6,833:0,6,255:23,0 chr1 242162118 . T . PASS END=242162125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,886:0,64,255:25,0 chr1 242162126 . T . PASS END=242162126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,939:0,54,255:23,0 chr1 242162127 . C . PASS END=242162127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 242162128 . T . PASS END=242162130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 242162131 . T . PASS END=242162133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,894:0,64,255:26,0 chr1 242162253 . C . PASS END=242162269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1188:0,96,255:32,0 chr1 242162270 . T . PASS END=242162270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1087:0,72,255:29,0 chr1 242162271 . T . PASS END=242162306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1166:0,96,255:32,0 chr1 242162307 . G . PASS END=242162310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 242253156 . T . PASS END=242253173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:39:0,87,1357:0,87,255:40,0 chr1 242253174 . C . PASS END=242253412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:38:0,93,1449:0,93,255:40,0 chr1 242263970 . C . PASS END=242264046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:56:0,120,1800:0,164,255:40,0 chr1 242264047 . G . PASS END=242264084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:74:0,120,1800:0,167,255:40,0 chr1 242270973 . A . PASS END=242271141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:87:34:0,87,1305:0,90,255:40,0 chr1 242277192 . C . PASS END=242277328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:35:0,105,1289:0,105,255:40,0 chr1 242287770 . C . PASS END=242287967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,102,1361:0,102,255:40,0 chr1 242383290 . C . PASS END=242383417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,119,1659:0,119,255:40,0 chr1 242414807 . C . PASS END=242414808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 242414809 . G . PASS END=242414809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 242414810 . G . PASS END=242414825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,907:0,72,255:26,0 chr1 242414826 . T . PASS END=242414834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr1 242414835 . T . PASS END=242414835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr1 242414836 . A . PASS END=242414838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 242414839 . T . PASS END=242414839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr1 242414840 . T . PASS END=242414914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1025:0,80,255:33,0 chr1 242414915 . T . PASS END=242414915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr1 242414916 . G . PASS END=242414919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 242414920 . A . PASS END=242414920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:27,0 chr1 242414921 . T . PASS END=242414952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:33,0 chr1 242414953 . C . PASS END=242414953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 242414954 . C . PASS END=242414956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 242414957 . C . PASS END=242415008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,847:0,69,255:26,0 chr1 242428639 . C . PASS END=242428750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1510:0,96,255:40,0 chr1 242451664 . C . PASS END=242451798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1215:0,106,255:40,0 chr1 242451799 . A . PASS END=242451802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr1 242451803 . C . PASS END=242451803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 242451804 . C . PASS END=242451809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 242451810 . G . PASS END=242451810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 242451811 . A . PASS END=242451812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr1 242451813 . T . PASS END=242451817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr1 242451818 . T . PASS END=242451818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 242451819 . C . PASS END=242451819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 242451820 . C . PASS END=242451820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 242451821 . A . PASS END=242451821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 242451822 . C . PASS END=242451832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:24,0 chr1 242511401 . C . PASS END=242511509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,113,1800:0,113,255:40,0 chr1 242511510 . A . PASS END=242511511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:49:0,87,1305:0,147,255:30,0 chr1 242511512 . C . PASS END=242511530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:60:42:0,60,900:0,108,255:25,0 chr1 242511531 . C . PASS END=242511534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:42:42:0,42,630:0,126,255:18,0 chr1 242511535 . T . PASS END=242511537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:30:40:0,30,450:0,104,255:12,0 chr1 242511538 . G . PASS END=242511539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:24:40:0,24,360:0,120,255:8,0 chr1 242511540 . T . PASS END=242511541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:12:40:0,12,180:0,120,255:4,0 chr1 242511542 . G . PASS END=242511544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:9:38:0,9,135:0,114,255:3,0 chr1 242524254 . C . PASS END=242524275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,159,255:40,0 chr1 242524276 . G . PASS END=242524306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,142,255:40,2 chr1 242524307 . T . PASS END=242524307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:51:53:0,51,1725:0,51,255:40,2 chr1 242524308 . G . PASS END=242524312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,115,1800:0,115,255:40,0 chr1 242524313 . T C, 49.39 PASS DP=48;MQ=152.77;MQRankSum=0.134;ReadPosRankSum=-0.052;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,22,0:0.458,0.000:48:11,6,0:15,16,0:46:84,0,46,184,184,184:255,0,255:24,0:4.9393e+01,9.8627e-05,4.9500e+01,1.8416e+02,2.1893e+02,1.8717e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,13,10,12:12,14,12,10 chr1 242612656 . C . PASS END=242612658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 242687390 . G . PASS END=242687392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr1 242687393 . C . PASS END=242687393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 242687394 . T . PASS END=242687394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 242687395 . C . PASS END=242687396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 242687397 . A . PASS END=242687397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 242687398 . G . PASS END=242687426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 242687427 . G . PASS END=242687429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 242687430 . C . PASS END=242687432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 242687433 . T . PASS END=242687433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 242687434 . A . PASS END=242687454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,424:0,45,255:16,0 chr1 242687455 . T . PASS END=242687455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr1 242687456 . G . PASS END=242687479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 242687480 . C . PASS END=242687490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:11,0 chr1 242687491 . A . PASS END=242687520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:9:0,20,315:0,20,255:9,0 chr1 242687521 . T . PASS END=242687569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:6,0 chr1 242687570 . G . PASS END=242687578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,147:3,0 chr1 243289751 . T . PASS END=243289761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,707:0,60,255:26,0 chr1 243289762 . C . PASS END=243289769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:28,0 chr1 243289770 . T . PASS END=243289770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 243289771 . C . PASS END=243289776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 243289777 . C . PASS END=243289777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 243289778 . T . PASS END=243289818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1070:0,83,255:33,0 chr1 243289819 . C . PASS END=243289820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:24,0 chr1 243289821 . G . PASS END=243289822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:24,0 chr1 243289823 . C . PASS END=243289824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,76,255:23,0 chr1 243289825 . C . PASS END=243289826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1062:0,54,255:23,0 chr1 243289827 . G . PASS END=243289827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:31:0,66,990:0,77,255:21,0 chr1 243289828 . A . PASS END=243289829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,1011:0,41,255:23,0 chr1 243289830 . T . PASS END=243289830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 243289831 . C . PASS END=243289831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:27,0 chr1 243289832 . A . PASS END=243289832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr1 243289833 . G . PASS END=243289834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:27,0 chr1 243289835 . A . PASS END=243289835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:26,0 chr1 243289836 . T . PASS END=243289837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,985:0,51,255:27,0 chr1 243289838 . C . PASS END=243289838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 243289839 . T . PASS END=243289839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr1 243289840 . C . PASS END=243289843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 243289844 . T . PASS END=243289847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr1 243289848 . G . PASS END=243289848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:25,0 chr1 243289849 . C . PASS END=243289855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 243289856 . T . PASS END=243289860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 243289861 . C . PASS END=243289907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,65,255:26,0 chr1 243289908 . G . PASS END=243289908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,1 chr1 243289909 . T . PASS END=243289909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:25:0,40,851:0,40,255:21,1 chr1 243289910 . C . PASS END=243289910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr1 243289911 . T . PASS END=243289929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr1 243289930 . T . PASS END=243289930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:22,0 chr1 243289931 . A . PASS END=243289937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,71,255:26,0 chr1 243289938 . G . PASS END=243289954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1113:0,93,255:31,0 chr1 243289955 . C . PASS END=243289955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 243289956 . G . PASS END=243290040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1157:0,82,255:34,0 chr1 243291551 . C . PASS END=243291602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:98:65:0,98,1800:0,98,255:40,0 chr1 243292662 . C . PASS END=243292755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,132,255:40,0 chr1 243299445 . C . PASS END=243299445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 243299446 . T . PASS END=243299477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:26:0,64,870:0,64,255:26,0 chr1 243299478 . C . PASS END=243299486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr1 243299487 . T . PASS END=243299503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,947:0,67,255:26,0 chr1 243299504 . G . PASS END=243299504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr1 243299505 . G . PASS END=243299505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,953:0,29,255:25,0 chr1 243299506 . A . PASS END=243299506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr1 243299507 . T . PASS END=243299529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:25,0 chr1 243299530 . T . PASS END=243299533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 243303239 . T . PASS END=243303406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:38:0,81,1260:0,81,255:40,0 chr1 243303407 . C . PASS END=243303409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 243305588 . C . PASS END=243305594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 243305595 . A . PASS END=243305595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr1 243305596 . T . PASS END=243305598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr1 243305599 . C . PASS END=243305599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 243305600 . T . PASS END=243305600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 243305601 . C . PASS END=243305603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr1 243305604 . T . PASS END=243305604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 243305605 . G . PASS END=243305606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr1 243305607 . A . PASS END=243305609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 243305610 . T . PASS END=243305615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr1 243305616 . A . PASS END=243305616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr1 243305617 . C . PASS END=243305641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:17:0,43,668:0,43,255:19,0 chr1 243305642 . G . PASS END=243305669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,806:0,62,255:25,0 chr1 243305670 . G . PASS END=243305670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 243305671 . T . PASS END=243305671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:27,0 chr1 243305672 . G . PASS END=243305712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1039:0,84,255:30,0 chr1 243305713 . C . PASS END=243305713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 243305714 . T . PASS END=243305723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr1 243305724 . T . PASS END=243305727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr1 243305728 . T . PASS END=243305728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,875:0,48,255:25,0 chr1 243305729 . G . PASS END=243305752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,878:0,75,255:26,0 chr1 243305753 . A . PASS END=243305753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:20,0 chr1 243305754 . T . PASS END=243305756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 243305757 . T . PASS END=243305757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:20,0 chr1 243305758 . G . PASS END=243305765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 243319523 . C . PASS END=243319524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 243319525 . G . PASS END=243319525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 243319526 . G . PASS END=243319527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr1 243319528 . T . PASS END=243319529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 243319530 . T . PASS END=243319530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:26,0 chr1 243319531 . C . PASS END=243319531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 243319532 . T . PASS END=243319532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr1 243319533 . C . PASS END=243319534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 243319535 . T . PASS END=243319535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 243319536 . C . PASS END=243319538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:27,0 chr1 243319539 . G . PASS END=243319543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 243319544 . G . PASS END=243319712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:28:0,81,1052:0,84,255:40,0 chr1 243319713 . A . PASS END=243319713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1363:0,51,255:33,0 chr1 243319714 . G . PASS END=243319724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1372:0,98,255:35,0 chr1 243319725 . A . PASS END=243319725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:30,0 chr1 243319726 . A . PASS END=243319731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:32,0 chr1 243319732 . A . PASS END=243319733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 243319734 . G . PASS END=243319743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1200:0,83,255:30,0 chr1 243319744 . C . PASS END=243319757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:26,0 chr1 243327586 . C . PASS END=243327586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr1 243327587 . T . PASS END=243327704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:29:0,80,1094:0,80,255:40,0 chr1 243327705 . C . PASS END=243327705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:30,0 chr1 243327706 . T . PASS END=243327726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1097:0,90,255:31,0 chr1 243327727 . T . PASS END=243327735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,74,255:26,0 chr1 243327736 . C . PASS END=243327739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,65,255:18,0 chr1 243327740 . A . PASS END=243327740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,820:0,6,255:16,0 chr1 243327741 . C . PASS END=243327779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,673:0,41,255:19,0 chr1 243327780 . A . PASS END=243327780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:17,0 chr1 243327781 . G . PASS END=243327783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 243327784 . A . PASS END=243327784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr1 243327785 . G . PASS END=243327790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr1 243327791 . T . PASS END=243327791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 243327792 . C . PASS END=243327793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 243327794 . T . PASS END=243327794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 243327795 . G . PASS END=243327797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 243327798 . C . PASS END=243327798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 243327799 . T . PASS END=243327803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr1 243327804 . G . PASS END=243327804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr1 243327805 . G . PASS END=243327806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr1 243327807 . T . PASS END=243327807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr1 243327808 . G . PASS END=243327811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 243327812 . C . PASS END=243327817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 243327818 . A . PASS END=243327818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,842:0,67,255:27,0 chr1 243327819 . T . PASS END=243327819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:27,0 chr1 243327820 . C . PASS END=243327828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr1 243327829 . A . PASS END=243327829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:27,0 chr1 243327830 . G . PASS END=243327873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1020:0,80,255:32,0 chr1 243327874 . T . PASS END=243327874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:31,0 chr1 243327875 . G . PASS END=243327911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1250:0,84,255:38,0 chr1 243327912 . G . PASS END=243327912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr1 243327913 . C . PASS END=243328115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:38:0,81,1291:0,81,255:40,0 chr1 243328116 . C . PASS END=243328116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1424:0,77,255:36,0 chr1 243328117 . A . PASS END=243328129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,110,1484:0,110,255:40,0 chr1 243328130 . T . PASS END=243328130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1465:0,79,255:39,0 chr1 243328131 . T . PASS END=243328170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:41:0,90,1463:0,90,255:40,0 chr1 243328171 . C . PASS END=243328207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,149,255:40,0 chr1 243328208 . G A, 0.01 DRAGENSnpHardQUAL DP=65;MQ=41.94;MQRankSum=-4.435;ReadPosRankSum=5.187;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:54,11,0:0.169,0.000:65:26,7,0:28,4,0:26:9,0,41,357,1886,2242:179,0,255:40,0:1.0650e-02,2.6110e+01,7.0235e+01,3.8264e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,24,8,3:30,24,6,5 chr1 243328209 . G . PASS END=243328245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,182,255:40,0 chr1 243328246 . G . PASS END=243328407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:86:38:0,86,1350:0,86,255:40,0 chr1 243328408 . A . PASS END=243328408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr1 243328409 . C . PASS END=243328586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1191:0,91,255:40,0 chr1 243328587 . A . PASS END=243328591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,86,255:26,0 chr1 243328592 . T . PASS END=243328592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:23,0 chr1 243328593 . G . PASS END=243328602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,71,255:22,0 chr1 243328603 . T . PASS END=243328603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:21,0 chr1 243328604 . A . PASS END=243328605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:22,0 chr1 243328606 . A . PASS END=243328606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr1 243328607 . A . PASS END=243328614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 243328615 . C . PASS END=243328615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 243328616 . C . PASS END=243328617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 243328618 . A . PASS END=243328620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 243328621 . A . PASS END=243328624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 243328625 . A . PASS END=243328625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr1 243328626 . C . PASS END=243328627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 243328628 . T . PASS END=243328628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:19,0 chr1 243328629 . C . PASS END=243328630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 243328631 . T . PASS END=243328632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:20,0 chr1 243328633 . C . PASS END=243328636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 243328637 . T . PASS END=243328637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr1 243328638 . A . PASS END=243328642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 243328643 . A . PASS END=243328643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:19,0 chr1 243328644 . C . PASS END=243328647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr1 243328648 . C . PASS END=243328648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:19,0 chr1 243328649 . A . PASS END=243328649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 243328650 . G . PASS END=243328650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 243328651 . A . PASS END=243328661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 243328662 . A . PASS END=243328662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr1 243328663 . A . PASS END=243328701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,709:0,63,255:24,0 chr1 243328702 . G . PASS END=243328702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 243328703 . A . PASS END=243328721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:23,0 chr1 243328722 . T . PASS END=243328722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr1 243328723 . T . PASS END=243328794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,798:0,62,255:26,0 chr1 243328795 . C . PASS END=243328805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:32,0 chr1 243328806 . T . PASS END=243328806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:30,0 chr1 243328807 . G . PASS END=243328816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr1 243328817 . A . PASS END=243328817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr1 243328818 . A . PASS END=243328825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 243328826 . A . PASS END=243328826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr1 243328827 . G . PASS END=243328827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 243328828 . C . PASS END=243328828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 243328829 . T . PASS END=243328829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 243328830 . T . PASS END=243328838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1102:0,96,255:34,0 chr1 243328839 . T . PASS END=243328839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1111:0,47,255:32,0 chr1 243328840 . T . PASS END=243328844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1210:0,86,255:36,0 chr1 243328845 . T . PASS END=243328845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 243328846 . C . PASS END=243328849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1202:0,100,255:36,0 chr1 243328850 . T . PASS END=243328886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:41:0,106,1710:0,106,255:40,0 chr1 243328887 . G T, 0.02 DRAGENSnpHardQUAL DP=53;MQ=38.63;MQRankSum=-3.165;ReadPosRankSum=0.644;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:46,6,0:0.115,0.000:52:22,3,0:24,3,0:24:11,0,45,215,1616,1831:87,0,255:40,0:1.9127e-02,2.3571e+01,7.1321e+01,2.3823e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,21,5,1:21,25,2,4 chr1 243328888 . A . PASS END=243328924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,129,255:40,0 chr1 243328925 . T . PASS END=243329011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:51:0,120,1800:0,153,255:40,0 chr1 243329012 . T . PASS END=243329048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:78:0,120,1800:0,167,255:40,0 chr1 243329049 . G A, 22.30 PASS DP=80;MQ=65.18;MQRankSum=-5.887;ReadPosRankSum=6.405;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:56,23,0:0.291,0.000:79:28,13,0:28,10,0:22:57,0,46,815,1983,2798:255,0,255:40,0:2.2302e+01,2.5694e-02,4.8776e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,28,8,15:28,28,10,13 chr1 243329050 . T . PASS END=243329074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,154,255:40,0 chr1 243329075 . T C, 21.52 PASS DP=76;MQ=64.05;MQRankSum=-5.446;ReadPosRankSum=2.755;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:54,22,0:0.289,0.000:76:27,12,0:27,10,0:22:56,0,46,752,1872,2624:255,0,255:40,0:2.1516e+01,3.0799e-02,4.8781e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,25,10,12:26,28,10,12 chr1 243329076 . T . PASS END=243329112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,183,255:40,0 chr1 243329113 . T . PASS END=243329275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:39:0,81,1215:0,84,255:40,0 chr1 243329276 . A . PASS END=243329279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:32:0,72,1080:0,94,255:26,0 chr1 243329280 . T . PASS END=243329280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,856:0,54,255:24,0 chr1 243329281 . T . PASS END=243329292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr1 243329293 . T . PASS END=243329295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 243329296 . C . PASS END=243329297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 243329298 . A . PASS END=243329298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr1 243329299 . G . PASS END=243329299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 243329300 . A . PASS END=243329300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr1 243329301 . G . PASS END=243329314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 243329315 . T . PASS END=243329323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,737:0,47,255:20,0 chr1 243329324 . G . PASS END=243329334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,679:0,63,255:22,0 chr1 243329335 . G . PASS END=243329340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 243329341 . T . PASS END=243329343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 243329344 . T . PASS END=243329357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr1 243329358 . G . PASS END=243329374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,703:0,63,255:21,0 chr1 243329375 . G . PASS END=243329406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,681:0,41,255:19,0 chr1 243329407 . T . PASS END=243329407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr1 243329408 . G . PASS END=243329415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,588:0,48,255:16,0 chr1 243329416 . T . PASS END=243329417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr1 243329418 . T . PASS END=243329418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 243332838 . T . PASS END=243332838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr1 243332839 . C . PASS END=243332875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:87:64:0,87,1305:0,152,255:40,0 chr1 243332876 . A . PASS END=243332883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:63:70:0,63,945:0,200,255:26,0 chr1 243332884 . AAG A, 44.75 PASS DP=70;MQ=47.69;MQRankSum=0.799;ReadPosRankSum=1.418;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,43,0:0.623,0.000:69:13,22,0:13,21,0:39:74,0,38,1806,928,2734:255,0,255:21,57:4.4751e+01,5.1801e-04,4.0665e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:10,16,26,17:13,13,23,20 chr1 243332885 . A . LowGQ END=243332887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:26,58:84:0:70:0,0,0:255,0,255:40,57 chr1 243332888 . G . PASS END=243332932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,173,255:40,0 chr1 243332933 . T . PASS END=243333056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:87:51:0,87,1800:0,87,255:40,0 chr1 243335999 . C . PASS END=243336136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:42:0,87,1305:0,126,255:40,0 chr1 243336137 . T . PASS END=243336143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:72:40:0,72,1080:0,110,255:26,0 chr1 243336144 . A . PASS END=243336148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:57:31:0,57,855:0,93,255:19,0 chr1 243340077 . T . PASS END=243340078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr1 243340079 . A . PASS END=243340079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr1 243340080 . C . PASS END=243340090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr1 243340091 . G . PASS END=243340091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 243340092 . G . PASS END=243340098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 243340099 . T . PASS END=243340099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 243340100 . A . PASS END=243340118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr1 243349081 . C . PASS END=243349626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:37:0,87,1144:0,87,255:40,0 chr1 243349627 . G . PASS END=243349627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1289:0,75,255:34,0 chr1 243349628 . C . PASS END=243349724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:38:0,96,1200:0,96,255:40,0 chr1 243354320 . C . PASS END=243354320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr1 243354321 . T . PASS END=243354337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,723:0,63,255:25,0 chr1 243354338 . A . PASS END=243354338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr1 243354339 . C . PASS END=243354339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr1 243354340 . A . PASS END=243354377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1025:0,84,255:36,0 chr1 243354378 . T . PASS END=243354378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1197:0,59,255:35,0 chr1 243354379 . G . PASS END=243354379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr1 243354380 . T . PASS END=243354380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1266:0,70,255:35,0 chr1 243354381 . T . PASS END=243354474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:34:0,81,1169:0,81,255:40,0 chr1 243354475 . T . PASS END=243354475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:31,0 chr1 243354476 . C . PASS END=243354496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1066:0,82,255:34,0 chr1 243354497 . T . PASS END=243354497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,918:0,62,255:29,0 chr1 243354498 . C . PASS END=243354502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr1 243354503 . A . PASS END=243354503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 243354504 . C . PASS END=243354504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:25,0 chr1 243354505 . T . PASS END=243354507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 243354508 . T . PASS END=243354508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 243354509 . G . PASS END=243354510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 243354511 . C . PASS END=243354512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 243354513 . C . PASS END=243354514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:24,0 chr1 243354515 . G . PASS END=243354516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:27,0 chr1 243354517 . T . PASS END=243354531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:22:0,60,799:0,64,255:22,0 chr1 243354532 . G . PASS END=243354557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,49,255:19,0 chr1 243354558 . C . PASS END=243354558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 243354559 . C . PASS END=243354561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr1 243354562 . G . PASS END=243354564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 243354565 . G . PASS END=243354568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr1 243354569 . T . PASS END=243354599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:24,0 chr1 243354600 . C . PASS END=243354607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr1 243354608 . C . PASS END=243354608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr1 243354609 . T . PASS END=243354609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr1 243354610 . G . PASS END=243354610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr1 243354611 . T . PASS END=243354611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1264:0,102,255:34,0 chr1 243354612 . T . PASS END=243354612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1162:0,63,255:33,0 chr1 243354613 . A . PASS END=243354613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr1 243354614 . T . PASS END=243354614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:33,0 chr1 243354615 . A . PASS END=243354616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 243354617 . G . PASS END=243354617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr1 243354618 . G . PASS END=243354618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:31,0 chr1 243354619 . G . PASS END=243354621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1150:0,63,255:33,0 chr1 243354622 . C . PASS END=243354623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:35,0 chr1 243354624 . T . PASS END=243354626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:34,0 chr1 243354627 . C . PASS END=243354627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1218:0,53,255:33,0 chr1 243354628 . G . PASS END=243354630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 243354631 . T . PASS END=243354631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr1 243354632 . C . PASS END=243354634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 243354635 . T . PASS END=243354636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr1 243354637 . G . PASS END=243354637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 243354638 . T . PASS END=243354639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:67:35:0,67,1271:0,67,255:33,0 chr1 243354640 . G . PASS END=243354661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1225:0,86,255:34,0 chr1 243354662 . C . PASS END=243354662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:27,0 chr1 243354663 . T . PASS END=243354679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,1054:0,80,255:29,0 chr1 243354680 . G . PASS END=243354680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr1 243354681 . C . PASS END=243354681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 243354682 . T . PASS END=243354682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 243354683 . G . PASS END=243354686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 243354687 . T . PASS END=243354718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,885:0,67,255:25,0 chr1 243354719 . C . PASS END=243354727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,63,255:18,0 chr1 243354728 . A . PASS END=243354728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:15,0 chr1 243354729 . A . PASS END=243354746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 243354747 . A . PASS END=243354753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr1 243354754 . G . PASS END=243354765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:12,0 chr1 243354766 . T . PASS END=243354766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:9,0 chr1 243354767 . C . PASS END=243354790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,368:0,36,255:12,0 chr1 243354791 . C T, 60.11 PASS DP=11;MQ=17.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,7,0:0,4,0:30:98,33,0,419,33,419:255,33,0:0,0:6.0108e+01,3.0108e+01,4.2437e-03,4.1552e+02,6.4878e+01,4.1852e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,10:0,0,5,6 chr1 243354792 . G . PASS END=243354796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr1 243362362 . C . PASS END=243362368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1380:0,98,255:40,0 chr1 243362369 . T . PASS END=243362470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:41:0,84,1260:0,101,255:40,2 chr1 243362471 . A . PASS END=243362471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr1 243362472 . G . PASS END=243362474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr1 243362475 . C . PASS END=243362480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:30:0,66,990:0,90,255:26,0 chr1 243362481 . G . PASS END=243362481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:22,0 chr1 243362482 . G . PASS END=243362482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:30:0,66,990:0,74,255:22,0 chr1 243362483 . C . PASS END=243362484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:23,0 chr1 243362485 . T . PASS END=243362496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 243363820 . C . PASS END=243363840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,651:0,41,255:19,0 chr1 243363841 . T . PASS END=243363841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 243363842 . C . PASS END=243363853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 243363854 . A . PASS END=243363854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 243363855 . G . PASS END=243363856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr1 243363857 . T . PASS END=243363857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:17,0 chr1 243363858 . T . PASS END=243363859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 243363860 . G . PASS END=243363867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr1 243363868 . C . PASS END=243363888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,880:0,65,255:26,0 chr1 243363889 . C . PASS END=243363931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:28:0,82,1028:0,82,255:33,0 chr1 243363932 . T . PASS END=243363932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1161:0,47,255:32,0 chr1 243363933 . G . PASS END=243363934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:33,0 chr1 243363935 . T . PASS END=243363947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,99,1232:0,102,255:36,0 chr1 243363948 . T . PASS END=243363948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:34,0 chr1 243363949 . G . PASS END=243363982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:37:0,84,1325:0,84,255:40,0 chr1 243364079 . C . PASS END=243364137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:72:0,120,1800:0,184,255:40,0 chr1 243375188 . C . PASS END=243375266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,111,1665:0,118,255:40,0 chr1 243385026 . C . PASS END=243385115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,153,255:40,0 chr1 243388478 . C . PASS END=243388582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:93:39:0,93,1482:0,93,255:40,0 chr1 243418745 . A . PASS END=243418815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,102,1429:0,116,255:40,0 chr1 243418816 . A . PASS END=243418816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1230:0,76,255:32,0 chr1 243418817 . C . PASS END=243418828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1485:0,104,255:35,0 chr1 243419345 . T . PASS END=243419346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 243419355 . C . PASS END=243419355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 243419370 . G . PASS END=243419370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr1 243419378 . C . PASS END=243419378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr1 243419476 . A . PASS END=243419477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:33,0 chr1 243419478 . G . PASS END=243419478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 243419479 . G . PASS END=243419501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1350:0,84,255:33,0 chr1 243419502 . C . PASS END=243419502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1181:0,69,255:31,0 chr1 243419503 . C . PASS END=243419511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1217:0,86,255:34,0 chr1 243419512 . A . PASS END=243419512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1099:0,66,255:30,0 chr1 243419513 . T . PASS END=243419520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1166:0,88,255:30,0 chr1 243419521 . C . PASS END=243419521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:30,0 chr1 243419522 . A . PASS END=243419538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1148:0,83,255:31,0 chr1 243419539 . C . PASS END=243419542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 243433394 . G . PASS END=243433515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:41:0,87,1305:0,93,255:40,2 chr1 243433516 . G . PASS END=243433516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1543:0,66,255:29,2 chr1 243433517 . G . PASS END=243433532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1111:0,82,255:30,0 chr1 243433533 . G . PASS END=243433533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr1 243433534 . G . PASS END=243433535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 243433536 . C . PASS END=243433559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,65,255:25,0 chr1 243433561 . T . PASS END=243433561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 243434278 . A . PASS END=243434365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:97:43:0,97,1574:0,97,255:40,0 chr1 243434376 . A . PASS END=243434376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 243437844 . G . PASS END=243437958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:44:0,120,1800:0,132,255:40,0 chr1 243437970 . A . PASS END=243437970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr1 243449574 . G . PASS END=243449700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:57:0,120,1800:0,155,255:40,0 chr1 243456393 . G . PASS END=243456522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:33:0,99,1225:0,99,255:40,0 chr1 243456701 . A . PASS END=243456796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:64:0,120,1800:0,174,255:40,0 chr1 243468011 . A . PASS END=243468011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 243468015 . G . PASS END=243468079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,165,255:40,0 chr1 243471139 . G . PASS END=243471139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr1 243471284 . T . PASS END=243471284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1089:0,72,255:33,0 chr1 243471291 . G . PASS END=243471479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:89:40:0,89,1405:0,89,255:40,0 chr1 243480057 . A . PASS END=243480068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,706:0,46,255:18,0 chr1 243480069 . C . PASS END=243480078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,770:0,66,255:26,0 chr1 243480079 . G . PASS END=243480092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:31,0 chr1 243480093 . A . PASS END=243480093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr1 243480094 . A . PASS END=243480172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1216:0,83,255:39,0 chr1 243480173 . A . PASS END=243480174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr1 243480175 . G . PASS END=243480175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr1 243480176 . C . PASS END=243480176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:34,0 chr1 243480177 . C . PASS END=243480195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1148:0,85,255:35,0 chr1 243480198 . A . PASS END=243480198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:34:0,75,1125:0,86,255:24,0 chr1 243481339 . C . PASS END=243481353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,138,255:40,0 chr1 243493842 . G . PASS END=243493842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 243493843 . C . PASS END=243493869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1160:0,99,255:40,0 chr1 243493870 . A . PASS END=243493906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,103,1686:0,103,255:40,0 chr1 243493907 . A T, 202.55 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,34,0:0,18,0:153:240,156,0,1916,156,1923:255,142,0:1,0:2.0255e+02,1.5255e+02,0.0000e+00,4.5000e+02,1.8732e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,18:0,0,22,30 chr1 243493908 . C . PASS END=243493944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:88:52:0,88,1635:0,88,255:40,0 chr1 243493945 . A . PASS END=243493951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:81:55:0,81,1488:0,81,255:40,0 chr1 243493952 . G . PASS END=243493952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,8:54:29:54:0,29,1366:0,29,255:40,0 chr1 243493953 . A . PASS END=243493962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:51:0,119,1588:0,119,255:40,0 chr1 243493963 . T . PASS END=243493963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:24:51:0,24,1326:0,24,255:40,0 chr1 243493964 . A . PASS END=243493994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:37:0,90,1244:0,90,255:40,0 chr1 243504341 . A . PASS END=243504475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:39:0,84,1260:0,104,255:40,0 chr1 243507517 . G . PASS END=243507569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,120,1800:0,145,255:40,0 chr1 243507570 . G . LowGQ END=243507571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,8:71:0:71:0,0,1825:0,0,255:40,0 chr1 243507572 . C . PASS END=243507633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:51:0,96,1620:0,96,255:40,0 chr1 243542017 . C . PASS END=243542017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 243542023 . G . PASS END=243542038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,854:0,61,255:26,0 chr1 243542039 . G . PASS END=243542146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1031:0,84,255:35,0 chr1 243542147 . A . PASS END=243542147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr1 243542148 . C . PASS END=243542149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 243542150 . A . PASS END=243542160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:29:0,63,945:0,71,255:25,0 chr1 243542161 . A . PASS END=243542161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 243542162 . C . PASS END=243542165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr1 243579004 . A . PASS END=243579074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,114,1427:0,114,255:40,0 chr1 243579075 . G . PASS END=243579111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,105,1575:0,120,255:40,0 chr1 243579112 . G A, 50.00 PASS DP=40;MQ=249.98;MQRankSum=5.335;ReadPosRankSum=4.952;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:12,10,0:5,13,0:47:85,0,48,815,571,1386:255,0,255:14,0:5.0000e+01,7.8694e-05,5.0889e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,7,16:8,9,8,15 chr1 243579113 . G . PASS END=243579131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:37,0 chr1 243581263 . T . PASS END=243581263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,208,255:40,0 chr1 243581270 . A . PASS END=243581379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:66:0,120,1800:0,194,255:40,0 chr1 243589729 . A . PASS END=243589860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:48:0,117,1755:0,126,255:40,1 chr1 243637529 . G . PASS END=243637607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,112,1800:0,112,255:40,0 chr1 243639233 . T . PASS END=243639255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,120,1800:0,131,255:40,0 chr1 243639256 . A . PASS END=243639293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,116,1566:0,116,255:40,0 chr1 243652316 . G . PASS END=243652328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,829:0,66,255:22,0 chr1 243652329 . G . PASS END=243652329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 243652330 . A . PASS END=243652338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr1 243652339 . G . PASS END=243652390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1178:0,83,255:32,0 chr1 243652391 . T . PASS END=243652391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:29,0 chr1 243652392 . C . PASS END=243652398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 243652399 . A . PASS END=243652402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1041:0,76,255:26,0 chr1 243652403 . G . PASS END=243652408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 243652409 . C . PASS END=243652435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 243652436 . G . PASS END=243652442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:22:0,51,765:0,53,255:18,0 chr1 243663045 . T . PASS END=243663106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:79:0,120,1800:0,204,255:40,0 chr1 243663148 . A . PASS END=243663148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 243663184 . G . PASS END=243663184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr1 243663236 . T . PASS END=243663236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr1 243663299 . A . PASS END=243663299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr1 243663374 . A . PASS END=243663374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 243663391 . A . PASS END=243663391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr1 243668551 . T . PASS END=243668616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:39:0,81,1215:0,84,255:40,0 chr1 243668617 . G . PASS END=243668618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:42:0,78,1170:0,126,255:26,0 chr1 243668619 . C . PASS END=243668619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,126,255:27,0 chr1 243668620 . C . PASS END=243668620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr1 243668621 . A . PASS END=243668622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,110,255:27,0 chr1 243668623 . A . PASS END=243668629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1053:0,71,255:26,0 chr1 243668630 . T . PASS END=243668630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:23,0 chr1 243668631 . C . PASS END=243668636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1008:0,68,255:25,0 chr1 243675626 . A . PASS END=243675728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:51:0,120,1800:0,136,255:40,0 chr1 243687729 . C . PASS END=243687780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,112,1800:0,112,255:40,0 chr1 243687904 . A . PASS END=243687908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr1 243708812 . C . PASS END=243708899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:66:0,120,1800:0,165,255:40,0 chr1 243716031 . C . PASS END=243716234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:32:0,81,1186:0,83,255:40,0 chr1 243716235 . T . PASS END=243716245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:24,0 chr1 243727022 . C . PASS END=243727124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:34:0,84,1280:0,84,255:40,0 chr1 243727125 . T . PASS END=243727125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,8:62:38:62:0,38,1594:0,38,255:40,0 chr1 243727126 . C . PASS END=243727150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,154,255:40,0 chr1 243727160 . A . PASS END=243727160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 243727587 . A . PASS END=243727689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:63:0,120,1800:0,159,255:40,0 chr1 243730080 . C . PASS END=243730105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:105:0,120,1800:0,255,255:40,0 chr1 243736228 . C . PASS END=243736230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,983:0,90,255:30,0 chr1 243736231 . G . PASS END=243736231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr1 243736232 . A . PASS END=243736260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1057:0,80,255:40,0 chr1 243736261 . T . PASS END=243736344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:34:0,89,1255:0,89,255:40,0 chr1 243736345 . A . PASS END=243736345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr1 243736346 . A . PASS END=243736350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:34,0 chr1 243776973 . C . PASS END=243777028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:87:0,120,1800:0,249,255:40,0 chr1 243777029 . A . PASS END=243777041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,217,255:40,0 chr1 243778398 . T . PASS END=243778463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:69:0,120,1800:0,182,255:40,0 chr1 243800913 . C . PASS END=243801044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:53:0,104,1800:0,104,255:40,0 chr1 243809195 . C . PASS END=243809320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:42:0,90,1350:0,110,255:40,0 chr1 243809321 . A . PASS END=243809321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:27,0 chr1 243809322 . G . PASS END=243809322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr1 243809323 . C . PASS END=243809339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:67:26:0,67,978:0,67,255:26,0 chr1 243828072 . A . PASS END=243828072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 243828074 . C . PASS END=243828075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,976:0,78,255:26,0 chr1 243828076 . T . PASS END=243828185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:84:28:0,84,1055:0,84,255:40,0 chr1 243846500 . T . PASS END=243846500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 243846501 . C . PASS END=243846501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 243846502 . A . PASS END=243846538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1097:0,83,255:35,0 chr1 243846539 . T . PASS END=243846539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1143:0,58,255:33,0 chr1 243846540 . G . PASS END=243846602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1161:0,94,255:39,0 chr1 243846603 . C . PASS END=243846603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:29,0 chr1 243846604 . C . PASS END=243846604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr1 243846605 . C . PASS END=243846605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:29,0 chr1 243846606 . T . PASS END=243846607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:29,0 chr1 243846608 . A . PASS END=243846612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,75,255:25,0 chr1 243851125 . C . PASS END=243851174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,102,1620:0,102,255:40,0 chr1 243858893 . T . PASS END=243859018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:45:0,120,1800:0,124,255:40,0 chr1 244006427 . C . PASS END=244006472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:97:42:0,97,1527:0,97,255:40,0 chr1 244214734 . A . PASS END=244214746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:78:0,120,1800:0,221,255:40,0 chr1 244217090 . G . PASS END=244217091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr1 244217092 . T . PASS END=244217092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr1 244217093 . A . PASS END=244217098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 244217099 . A . PASS END=244217099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:33,0 chr1 244217100 . C . PASS END=244217398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:31:0,80,1123:0,80,255:40,0 chr1 244217399 . C . PASS END=244217409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr1 244217410 . T . PASS END=244217410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:24,0 chr1 244217411 . A . PASS END=244217414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr1 244217415 . C . PASS END=244217415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 244217416 . C . PASS END=244217420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:22,0 chr1 244217421 . G . PASS END=244217428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1178:0,83,255:29,0 chr1 244217429 . T . PASS END=244217430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr1 244217431 . G . PASS END=244217434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 244217435 . A . PASS END=244217435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:26,0 chr1 244217436 . A . PASS END=244217439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 244217440 . T . PASS END=244217458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,903:0,78,255:26,0 chr1 244217459 . A . PASS END=244217500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,889:0,80,255:37,0 chr1 244217501 . A . PASS END=244217501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1111:0,64,255:31,0 chr1 244217502 . T . PASS END=244217508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,99,1366:0,100,255:35,0 chr1 244217509 . A . PASS END=244217509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1158:0,67,255:31,0 chr1 244217510 . G . PASS END=244217514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:33,0 chr1 244217515 . T . PASS END=244217515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr1 244217516 . C . PASS END=244217541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1255:0,89,255:38,0 chr1 244217542 . G . PASS END=244217542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr1 244217543 . G . PASS END=244217547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1396:0,98,255:38,0 chr1 244217548 . A . PASS END=244217548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:35,0 chr1 244217549 . G . PASS END=244217589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:36:0,97,1244:0,97,255:38,0 chr1 244217590 . G . PASS END=244217590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1127:0,75,255:33,0 chr1 244217591 . A . PASS END=244217615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:35,0 chr1 244217616 . C . PASS END=244217624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1125:0,69,255:26,0 chr1 244217625 . G . PASS END=244217629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 244217630 . T . PASS END=244217630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr1 244217631 . G . PASS END=244217637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 244217638 . G . PASS END=244217639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr1 244217640 . G . PASS END=244217641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 244217642 . C . PASS END=244217645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 244217646 . G . PASS END=244217647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 244217648 . A . PASS END=244217661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,969:0,65,255:26,0 chr1 244217662 . T . PASS END=244217662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr1 244217663 . T . PASS END=244217664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 244217665 . C . PASS END=244217667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 244217668 . T . PASS END=244217677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 244217678 . C . PASS END=244217678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:25,0 chr1 244217679 . A . PASS END=244217680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1086:0,74,255:26,0 chr1 244217681 . G . PASS END=244217681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 244217682 . C . PASS END=244217683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1139:0,77,255:27,0 chr1 244217684 . T . PASS END=244217684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr1 244217685 . C . PASS END=244217685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 244217686 . C . PASS END=244217693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 244217694 . T . PASS END=244217694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr1 244217695 . G . PASS END=244217704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr1 244217705 . C . PASS END=244217705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:29,0 chr1 244217706 . A . PASS END=244217727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1247:0,86,255:33,0 chr1 244217728 . G . PASS END=244217728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:31,0 chr1 244217729 . G . PASS END=244217846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1177:0,80,255:35,0 chr1 244217847 . T . PASS END=244217847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr1 244217848 . T . PASS END=244217851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 244217852 . G . PASS END=244217874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,978:0,67,255:26,0 chr1 244217875 . T . PASS END=244217875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:25,0 chr1 244217876 . A . PASS END=244217879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,908:0,68,255:26,0 chr1 244217880 . C . PASS END=244217880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 244217881 . T . PASS END=244217883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 244217884 . T . PASS END=244217998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1208:0,83,255:38,0 chr1 244217999 . A . PASS END=244217999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:27,0 chr1 244218000 . A . PASS END=244218017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1127:0,80,255:30,0 chr1 244218018 . C . PASS END=244218031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,80,255:26,0 chr1 244218032 . A . PASS END=244218040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1147:0,80,255:30,0 chr1 244218041 . A . PASS END=244218041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr1 244218042 . T . PASS END=244218043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 244218044 . T . PASS END=244218045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1003:0,63,255:29,0 chr1 244218046 . G . PASS END=244218047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 244218048 . T . PASS END=244218048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1039:0,35,255:27,0 chr1 244218049 . C . PASS END=244218057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:29,0 chr1 244218058 . G . PASS END=244218058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 244218059 . A . PASS END=244218062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 244218063 . C . PASS END=244218063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 244218064 . T . PASS END=244218070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1125:0,82,255:30,0 chr1 244218071 . T . PASS END=244218071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1109:0,65,255:30,0 chr1 244218072 . G . PASS END=244218075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr1 244218076 . G . PASS END=244218076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:31,0 chr1 244218077 . A . PASS END=244218093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1158:0,83,255:34,0 chr1 244218094 . A . PASS END=244218094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:33,0 chr1 244218095 . A . PASS END=244218115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1119:0,85,255:34,0 chr1 244218116 . T . PASS END=244218116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1050:0,71,255:32,0 chr1 244218117 . G . PASS END=244218125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1144:0,88,255:34,0 chr1 244218126 . G . PASS END=244218126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:30,0 chr1 244218127 . A . PASS END=244218165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,88,255:34,0 chr1 244218166 . C . PASS END=244218171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,83,255:26,0 chr1 244218172 . C . PASS END=244218174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 244218175 . T . PASS END=244218193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,77,255:26,0 chr1 244218194 . G . PASS END=244218198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 244218199 . G . PASS END=244218216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr1 244218217 . T . PASS END=244218230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 244218231 . C . PASS END=244218231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr1 244218232 . A . PASS END=244218253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1124:0,87,255:29,0 chr1 244218254 . T . PASS END=244218254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr1 244218255 . C . PASS END=244218256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 244218257 . T . PASS END=244218257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr1 244218258 . G . PASS END=244218271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr1 244218272 . G . PASS END=244218272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr1 244218273 . C . PASS END=244218277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 244218278 . A . PASS END=244218280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 244218281 . T . PASS END=244218284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 244218285 . C . PASS END=244218285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 244218286 . G . PASS END=244218288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 244218289 . C . PASS END=244218318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr1 244218319 . G . PASS END=244218319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr1 244218320 . A . PASS END=244218320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 244218321 . T . PASS END=244218321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr1 244218322 . G . PASS END=244218325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr1 244218326 . A . PASS END=244218326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:20,0 chr1 244218327 . C . PASS END=244218331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 244218332 . C . PASS END=244218355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:20:0,51,765:0,53,255:19,0 chr1 244218356 . C . PASS END=244218364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr1 244218365 . G . PASS END=244218365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 244218366 . C . PASS END=244218382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,778:0,66,255:23,0 chr1 244218383 . G . PASS END=244218383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 244218384 . C . PASS END=244218386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 244218387 . C . PASS END=244218387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 244218388 . G . PASS END=244218395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 244218396 . T . PASS END=244218396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 244218397 . C . PASS END=244218397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr1 244218398 . A . PASS END=244218398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr1 244218399 . C . PASS END=244218413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,862:0,61,255:25,0 chr1 244218414 . C . PASS END=244218415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:24,0 chr1 244218416 . A . PASS END=244218417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 244218418 . A . PASS END=244218418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr1 244218419 . C . PASS END=244218419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 244218420 . A . PASS END=244218420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 244218421 . T . PASS END=244218422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 244218423 . C . PASS END=244218423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr1 244218424 . A . PASS END=244218424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 244218425 . C . PASS END=244218428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:24,0 chr1 244218429 . G . PASS END=244218433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr1 244218434 . G . PASS END=244218435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:24,0 chr1 244218436 . A . PASS END=244218437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:23,0 chr1 244218438 . G . PASS END=244218438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr1 244218439 . A . PASS END=244218440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,882:0,62,255:22,0 chr1 244218441 . C . PASS END=244218441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr1 244218442 . T . PASS END=244218444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr1 244218445 . C . PASS END=244218446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:22,0 chr1 244218447 . G . PASS END=244218447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr1 244218448 . T . PASS END=244218448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,831:0,23,255:21,0 chr1 244218449 . A . PASS END=244218449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr1 244218450 . C . PASS END=244218450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:1:26:0,1,808:0,1,255:21,0 chr1 244218451 . T . PASS END=244218452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:24,0 chr1 244218453 . G . PASS END=244218453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,906:0,26,255:23,0 chr1 244218454 . C . PASS END=244218455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:24,0 chr1 244218456 . C . PASS END=244218457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,787:0,36,255:24,0 chr1 244218458 . A . PASS END=244218469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:26,0 chr1 244218470 . A . PASS END=244218474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:29,0 chr1 244218475 . G . PASS END=244218476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr1 244218477 . G . PASS END=244218511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr1 244218512 . G . PASS END=244218512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr1 244218513 . G . PASS END=244218516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1162:0,93,255:31,0 chr1 244218517 . G . PASS END=244218517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr1 244218518 . A . PASS END=244218519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1172:0,93,255:31,0 chr1 244218520 . C . PASS END=244218520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr1 244218521 . G . PASS END=244218525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 244218526 . T . PASS END=244218526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:27,0 chr1 244218527 . T . PASS END=244218530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 244218531 . G . PASS END=244218534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1108:0,74,255:28,0 chr1 244218535 . T . PASS END=244218537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr1 244218538 . G . PASS END=244218538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:28,0 chr1 244218539 . G . PASS END=244218540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 244218541 . G . PASS END=244218541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:26,0 chr1 244218542 . A . PASS END=244218543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:27,0 chr1 244218544 . C . PASS END=244218545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr1 244218546 . G . PASS END=244218553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:29,0 chr1 244218554 . A . PASS END=244218554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:28,0 chr1 244218555 . C . PASS END=244218559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 244218560 . G . PASS END=244218560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr1 244218561 . C . PASS END=244218568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 244218569 . A . PASS END=244218569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:26,0 chr1 244218570 . C . PASS END=244218599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1108:0,84,255:30,0 chr1 244218600 . A . PASS END=244218602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr1 244218603 . C . PASS END=244218606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 244218607 . G . PASS END=244218634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,65,255:26,0 chr1 244218635 . G . PASS END=244218647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:17:0,47,720:0,47,255:17,0 chr1 244218648 . T . PASS END=244218648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr1 244218649 . A . PASS END=244218665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 244218666 . G . PASS END=244218666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 244218667 . A . PASS END=244218672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 244527253 . A . PASS END=244527256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:42:39:0,42,630:0,117,255:17,0 chr1 244527257 . C . PASS END=244527257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:39:40:0,39,585:0,104,255:13,0 chr1 244527258 . G . PASS END=244527274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:21:39:0,21,315:0,101,255:9,0 chr1 244527275 . T . PASS END=244527277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:15:39:0,15,225:0,117,255:6,0 chr1 244527278 . T . LowGQ END=244527281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:39,0:39:0:39:0,0,0:0,117,255:3,0 chr1 244527990 . A . PASS END=244528058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,117,1755:0,125,255:40,0 chr1 244538674 . T . PASS END=244538769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,119,1643:0,119,255:40,0 chr1 244541745 . C . PASS END=244541941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:47:0,120,1800:0,128,255:40,0 chr1 244552253 . A . PASS END=244552368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:97:41:0,97,1535:0,97,255:40,0 chr1 244552369 . T . PASS END=244552369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1544:0,72,255:40,0 chr1 244552370 . A . PASS END=244552371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr1 244572888 . T . PASS END=244572940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,180,255:40,0 chr1 244574589 . C . PASS END=244574738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:56:0,120,1800:0,148,255:40,0 chr1 244579283 . C . PASS END=244579380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:64:0,120,1800:0,148,255:40,0 chr1 244580930 . G . PASS END=244581054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:37:0,108,1620:0,111,255:40,0 chr1 244582062 . A . PASS END=244582064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 244582065 . G . PASS END=244582213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:32:0,86,1169:0,86,255:40,0 chr1 244582214 . T . PASS END=244582214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:31,0 chr1 244582215 . C . PASS END=244582216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,108,255:31,0 chr1 244583472 . C . PASS END=244583598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:50:0,114,1710:0,150,255:40,0 chr1 244586137 . C . PASS END=244586218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,179,255:40,0 chr1 244587255 . C . PASS END=244587362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,133,255:40,0 chr1 244587623 . T . PASS END=244587689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:70:0,120,1800:0,192,255:40,0 chr1 244595847 . C . PASS END=244595878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:84:0,120,1800:0,164,255:40,0 chr1 244595879 . T . PASS END=244595897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:75:0,120,1800:0,139,255:40,2 chr1 244600127 . C . PASS END=244600195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,201,255:40,0 chr1 244600968 . C . PASS END=244601070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,164,255:40,0 chr1 244613292 . C . PASS END=244613294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,238,255:40,0 chr1 244614937 . C . PASS END=244614980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr1 244614981 . C . PASS END=244614982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 244614983 . A . PASS END=244615048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,607:0,44,255:19,0 chr1 244615049 . C . PASS END=244615050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 244615051 . C . PASS END=244615055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 244615056 . T . PASS END=244615083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 244615084 . G . PASS END=244615084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 244615085 . G . PASS END=244615099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 244615100 . T . PASS END=244615101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 244615102 . G . LowGQ END=244615102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:8,0 chr1 244615103 . G . PASS END=244615119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 244615579 . A . PASS END=244615636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1149:0,90,255:35,0 chr1 244620795 . G . PASS END=244620871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:84:0,120,1800:0,225,255:40,0 chr1 244624674 . A . PASS END=244624678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr1 244624679 . C . PASS END=244624679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:17,0 chr1 244624680 . G . PASS END=244624681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 244624682 . G . PASS END=244624684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 244624685 . C . PASS END=244624685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:21,0 chr1 244624686 . T . PASS END=244624693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr1 244624694 . A . PASS END=244624694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 244624695 . G . PASS END=244624705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr1 244624706 . G . PASS END=244624706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 244624707 . G . PASS END=244624708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr1 244624709 . T . PASS END=244624709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 244624710 . G . PASS END=244624770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,864:0,61,255:26,0 chr1 244624771 . A . PASS END=244624793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:15:0,45,499:0,45,255:19,0 chr1 244624794 . G . PASS END=244624795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 244624796 . G . PASS END=244624796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr1 244627210 . G . PASS END=244627258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:93:0,120,1800:0,224,255:40,1 chr1 244640843 . A . PASS END=244640916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:62:0,120,1800:0,177,255:40,0 chr1 244641208 . C . PASS END=244641277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,120,1800:0,121,255:40,0 chr1 244643019 . G . PASS END=244643086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:72:0,120,1800:0,200,255:40,0 chr1 244653749 . A . PASS END=244653773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:102:0,120,1800:0,255,255:40,0 chr1 244662304 . C . PASS END=244662381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,106,1429:0,106,255:40,0 chr1 244678627 . A . PASS END=244678629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,176,255:40,0 chr1 244681894 . A . PASS END=244681894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr1 244681895 . A . PASS END=244681895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr1 244681896 . T . PASS END=244681896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr1 244681897 . T . PASS END=244681897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 244681898 . C . PASS END=244682000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:33:0,80,1227:0,80,255:40,0 chr1 244715624 . G . PASS END=244715928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:42:0,120,1800:0,126,255:40,0 chr1 244715929 . A . PASS END=244715965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,161,255:40,0 chr1 244715966 . G A, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.542;ReadPosRankSum=2.313;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,33,0:0.559,0.000:59:12,14,0:14,19,0:48:85,0,49,1164,930,2094:255,0,255:22,0:5.0000e+01,7.1964e-05,5.1812e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,16,17:10,16,21,12 chr1 244715967 . C . PASS END=244716003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:53:0,120,1800:0,125,255:40,0 chr1 244716004 . A . PASS END=244716080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:48:0,80,1430:0,80,255:40,0 chr1 244716081 . T . PASS END=244716081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1552:0,58,255:40,0 chr1 244716082 . C . PASS END=244716103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:39:0,86,1368:0,86,255:40,0 chr1 244716104 . T . PASS END=244716104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1323:0,78,255:33,0 chr1 244716105 . T . PASS END=244716116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,89,255:34,0 chr1 244723970 . G . PASS END=244723971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 244723972 . T . PASS END=244723977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:29,0 chr1 244723978 . A . PASS END=244723978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 244723979 . A . PASS END=244723980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 244723981 . A . PASS END=244723981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 244723982 . A . PASS END=244724447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:91:35:0,91,1211:0,91,255:40,0 chr1 244735632 . A . PASS END=244736074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:89:35:0,89,1263:0,89,255:40,0 chr1 244745098 . A . PASS END=244745156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,3:104:99:95:0,120,1800:0,234,255:40,0 chr1 244746747 . G . PASS END=244746790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:35:0,89,1279:0,89,255:40,0 chr1 244746791 . A . PASS END=244746827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,118,1800:0,118,255:40,0 chr1 244746828 . T A, 202.57 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,28,0:0,24,0:153:240,156,0,340,340,340:255,157,0:0,0:2.0257e+02,1.5257e+02,0.0000e+00,3.3734e+02,3.7211e+02,3.4035e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,27,25:0,0,23,29 chr1 244746829 . G . PASS END=244746861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1202:0,83,255:40,0 chr1 244747166 . A . PASS END=244747241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:41:0,90,1425:0,90,255:40,0 chr1 244749574 . C . PASS END=244749618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:81:0,120,1800:0,196,255:40,0 chr1 244751784 . G . PASS END=244751836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:98:0,120,1800:0,243,255:40,0 chr1 244754983 . A . PASS END=244755033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:95:0,120,1800:0,255,255:40,0 chr1 244756697 . G . PASS END=244756730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,159,255:40,0 chr1 244756801 . A . PASS END=244756880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:45:0,114,1753:0,114,255:40,0 chr1 244768997 . A . PASS END=244769096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:61:0,120,1800:0,172,255:40,1 chr1 244773542 . A . PASS END=244773626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,105,1493:0,115,255:40,0 chr1 244773627 . A . PASS END=244773627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr1 244773628 . G . PASS END=244773628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 244780831 . A . PASS END=244780968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:35:0,96,1393:0,102,255:40,0 chr1 244780969 . A . PASS END=244780969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1267:0,76,255:38,0 chr1 244780970 . T . PASS END=244780988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1314:0,81,255:40,0 chr1 244781120 . C . PASS END=244781168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:73:0,120,1800:0,197,255:40,0 chr1 244798791 . T . PASS END=244798844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:47:0,120,1800:0,141,255:40,0 chr1 244803230 . T . PASS END=244803231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:49:0,103,1646:0,103,255:40,0 chr1 244803232 . C . PASS END=244803232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1721:0,73,255:40,0 chr1 244803233 . A . PASS END=244803258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:98:50:0,98,1701:0,98,255:40,0 chr1 244803259 . T . PASS END=244803383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:47:0,101,1776:0,101,255:40,0 chr1 244816616 . A . PASS END=244816626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:26,0 chr1 244816627 . C . PASS END=244816641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,895:0,81,255:27,0 chr1 244816642 . C . PASS END=244816657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 244817235 . A . PASS END=244817327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:46:0,104,1677:0,104,255:40,0 chr1 244849899 . T . PASS END=244849971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,196,255:40,0 chr1 244852551 . A . PASS END=244852644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,106,1353:0,106,255:40,0 chr1 244855181 . A . PASS END=244855322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:49:0,120,1800:0,132,255:40,0 chr1 244868858 . A . PASS END=244868858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 244868859 . T . PASS END=244868886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:26,0 chr1 244868887 . G . PASS END=244868900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr1 244868901 . C . PASS END=244868903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 244868904 . A . PASS END=244868909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 244868910 . G . PASS END=244868913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 244868914 . C . PASS END=244868916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 244868917 . T . PASS END=244868917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:26,0 chr1 244868918 . A . PASS END=244868919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 244868920 . A . PASS END=244868920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:26,0 chr1 244868921 . C . PASS END=244868921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 244868922 . C . PASS END=244868923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1031:0,71,255:26,0 chr1 244868924 . T . PASS END=244868924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 244868925 . T . PASS END=244868925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr1 244868926 . T . PASS END=244868947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1094:0,80,255:31,0 chr1 244868948 . G . PASS END=244868948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 244868949 . A . PASS END=244868950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 244868951 . T . PASS END=244868971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,65,255:26,0 chr1 244868972 . C . PASS END=244868973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 244868974 . G . PASS END=244868987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,900:0,69,255:24,0 chr1 244868988 . A . PASS END=244868988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 244868989 . A . PASS END=244869036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,817:0,69,255:24,0 chr1 244869037 . T . PASS END=244869037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr1 244869038 . T . PASS END=244869040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 244869041 . G . PASS END=244869058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr1 244869059 . G . PASS END=244869059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 244869060 . G . PASS END=244869062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 244869063 . C . PASS END=244869066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 244869067 . A . PASS END=244869076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 244869077 . C . PASS END=244869077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 244869078 . A . PASS END=244869078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr1 244869079 . C . PASS END=244869091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 244893677 . T . PASS END=244893725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr1 244893726 . G . PASS END=244893773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 244893774 . T . LowGQ END=244893791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,16:0,0,46:3,0 chr1 244893792 . T . PASS END=244893794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr1 244893795 . G . LowGQ END=244893808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,90:0,0,111:3,0 chr1 244893809 . G . PASS END=244893810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 244893811 . C . PASS END=244893814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr1 244893815 . G . PASS END=244893817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 244893818 . C . PASS END=244893856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 244893857 . G . PASS END=244893894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr1 244893895 . G . PASS END=244893895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 244893896 . C . PASS END=244893914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:17,0 chr1 244893915 . T . PASS END=244893915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 244893916 . A . PASS END=244893953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr1 244893954 . T . PASS END=244893954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 244893955 . G . PASS END=244893956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 244893957 . A . PASS END=244893993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,495:0,32,255:13,0 chr1 244893994 . C . PASS END=244893995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 244893996 . T . PASS END=244894006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:14:0,32,565:0,32,255:13,0 chr1 244894007 . C . PASS END=244894026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 244894027 . T . PASS END=244894028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 244894029 . T . PASS END=244894029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 244894030 . T . PASS END=244894042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr1 244894043 . G . PASS END=244894043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 244894044 . C . PASS END=244894071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 244894072 . C . PASS END=244894077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr1 244894078 . A . PASS END=244894101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr1 244894102 . C . PASS END=244894122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr1 244894123 . G . PASS END=244894144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,210:6,0 chr1 244894145 . C . LowGQ END=244894145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:4,0 chr1 244894146 . C . PASS END=244894165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,103:0,12,103:4,0 chr1 244894166 . C . PASS END=244894202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr1 244894203 . C A, 0.33 DRAGENSnpHardQUAL DP=5;MQ=250.00;MQRankSum=0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:1,0,0:3,1,0:11:24,0,50,36,143,179:24,0,140:4,0:3.2832e-01,1.1379e+01,6.4379e+01,4.7137e+01,1.8919e+02,1.9318e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,0,1:1,3,1,0 chr1 244894204 . C . PASS END=244894215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr1 244894216 . G . PASS END=244894225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr1 244999017 . A . PASS END=244999020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr1 244999021 . C . PASS END=244999021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 244999022 . C . PASS END=244999022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 244999023 . G . PASS END=244999023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 244999024 . C . PASS END=244999026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 244999027 . C . PASS END=244999027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr1 244999028 . G . PASS END=244999028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr1 244999029 . C . PASS END=244999034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr1 244999035 . C . PASS END=244999035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,545:0,20,255:15,0 chr1 244999036 . C . PASS END=244999040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 244999041 . G . PASS END=244999042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,490:0,31,255:13,0 chr1 244999043 . G . PASS END=244999048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 244999049 . G . PASS END=244999050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr1 244999051 . A . PASS END=244999053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 244999054 . G . PASS END=244999054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 244999055 . G . PASS END=244999055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:10,0 chr1 244999056 . A . PASS END=244999058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 244999787 . G . PASS END=244999822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,200,255:40,0 chr1 245005246 . T . PASS END=245005335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,177,255:40,0 chr1 245005336 . G . PASS END=245005361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:75:0,120,1800:0,195,255:40,0 chr1 245005363 . G . PASS END=245005363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,221,255:40,0 chr1 245005497 . G . PASS END=245005535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,170,255:40,0 chr1 245005536 . T . PASS END=245005560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:79:0,120,1800:0,204,255:40,0 chr1 245006343 . G . PASS END=245006449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:51:0,120,1800:0,140,255:40,0 chr1 245006450 . G . PASS END=245006478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:50:0,90,1350:0,127,255:40,0 chr1 245012111 . T . PASS END=245012158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,111,1665:0,136,255:40,0 chr1 245017752 . T . PASS END=245017805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,180,255:40,0 chr1 245017807 . T . PASS END=245017807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:69:0,120,1800:0,152,255:40,0 chr1 245018230 . T . PASS END=245018346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:53:0,108,1535:0,108,255:40,0 chr1 245018726 . C . PASS END=245018910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:42:0,109,1439:0,109,255:40,0 chr1 245019204 . G . PASS END=245019204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr1 245019206 . C . PASS END=245019430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:88:38:0,88,1350:0,88,255:40,0 chr1 245019431 . A . PASS END=245019436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr1 245019437 . C . PASS END=245019450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:15:0,42,630:0,45,255:19,0 chr1 245019451 . G . PASS END=245019460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 245019745 . T . PASS END=245019763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr1 245019764 . A . PASS END=245019773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:26,0 chr1 245019774 . C . PASS END=245019774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:24,0 chr1 245019775 . C . PASS END=245019779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr1 245019780 . G . PASS END=245019780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 245019781 . T . PASS END=245019781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr1 245019782 . T . PASS END=245019804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:28:0,84,1025:0,84,255:33,0 chr1 245019805 . T . PASS END=245019805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr1 245019806 . T . PASS END=245019907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1155:0,86,255:40,0 chr1 245019908 . G . PASS END=245019910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:36:0,78,1170:0,95,255:26,0 chr1 245019911 . G . PASS END=245019911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1260:0,98,255:27,0 chr1 245019912 . C . PASS END=245019912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:29,0 chr1 245019913 . A . PASS END=245019927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1087:0,82,255:32,0 chr1 245020030 . C . PASS END=245020139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:31:0,86,1141:0,86,255:40,0 chr1 245020140 . G . PASS END=245020140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr1 245020141 . C . PASS END=245020147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 245020148 . A . PASS END=245020158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr1 245020900 . C . PASS END=245020907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,155,255:40,0 chr1 245020908 . T . PASS END=245020908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:77:57:0,77,1953:0,77,255:40,0 chr1 245020909 . A . PASS END=245021019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,131,255:40,0 chr1 245021022 . A . PASS END=245021022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 245021024 . T . PASS END=245021024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,117,1755:0,156,255:39,0 chr1 245021306 . C . PASS END=245021306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr1 245021313 . T . PASS END=245021313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr1 245021314 . T . PASS END=245021314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1185:0,55,255:31,0 chr1 245021315 . C . PASS END=245021337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1350:0,102,255:40,0 chr1 245021338 . C . PASS END=245021539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:33:0,87,1305:0,91,255:40,0 chr1 245021540 . T . PASS END=245021553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:25:0,63,990:0,63,255:23,0 chr1 245021554 . T . PASS END=245021554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr1 245021555 . C . PASS END=245021558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 245021559 . T . PASS END=245021559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr1 245021560 . T . PASS END=245021563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 245021564 . C . PASS END=245021566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,845:0,56,255:20,0 chr1 245021567 . T . PASS END=245021570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr1 245021571 . A . PASS END=245021576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,52,255:18,0 chr1 245022026 . C . PASS END=245022026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr1 245022031 . A . PASS END=245022143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:82:0,120,1800:0,199,255:40,0 chr1 245022145 . T . PASS END=245022145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:84:0,120,1800:0,219,255:40,0 chr1 245022152 . A . PASS END=245022152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr1 245022571 . C . PASS END=245022571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr1 245022576 . C . PASS END=245022676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:53:0,120,1800:0,143,255:40,0 chr1 245023637 . C . PASS END=245023825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:46:0,118,1800:0,118,255:40,2 chr1 245025763 . A . PASS END=245025766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:99:53:0,112,1770:0,112,255:40,0 chr1 245025767 . A . LowGQ END=245025767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:0:55:0,0,1524:37,0,255:40,0 chr1 245025768 . T . PASS END=245025771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,110,1795:0,110,255:40,0 chr1 245025772 . G . PASS END=245025772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,7:58:58:58:0,58,1755:0,58,255:40,0 chr1 245025773 . A . PASS END=245025836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:89:57:0,89,1800:0,89,255:40,0 chr1 245025839 . G . PASS END=245025839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr1 245025921 . C . PASS END=245026054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,109,1665:0,109,255:40,0 chr1 245026919 . C . PASS END=245026922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:16,0 chr1 245026923 . C . PASS END=245026923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 245026924 . G . PASS END=245026925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 245026926 . C . PASS END=245026926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr1 245026927 . G . PASS END=245026933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 245026934 . C . PASS END=245026934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr1 245026935 . G . PASS END=245026937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,596:0,48,255:16,0 chr1 245026938 . G . PASS END=245026938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 245026939 . C . PASS END=245026939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 245026940 . G . PASS END=245026940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 245026941 . A . PASS END=245026996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:19,0 chr1 245026997 . G . PASS END=245027003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 245027004 . C . PASS END=245027014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr1 245027015 . C . PASS END=245027023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr1 245027024 . C . PASS END=245027026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 245027027 . C . PASS END=245027027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr1 245027028 . G . PASS END=245027037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,705:0,47,255:19,0 chr1 245027038 . G . PASS END=245027043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr1 245027044 . C . PASS END=245027073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:19:0,49,693:0,49,255:19,0 chr1 245027074 . G . PASS END=245027076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 245027077 . C . PASS END=245027081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 245027082 . C . PASS END=245027082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 245027083 . T . PASS END=245027083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 245027084 . G . PASS END=245027087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:23,0 chr1 245027088 . T . PASS END=245027088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr1 245027089 . T . PASS END=245027094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 245027095 . T . PASS END=245027095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 245027096 . G . PASS END=245027127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,884:0,62,255:26,0 chr1 245027128 . T . PASS END=245027128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr1 245027129 . G . PASS END=245027150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,931:0,72,255:25,0 chr1 245027151 . G . PASS END=245027151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 245027152 . C . PASS END=245027202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,853:0,61,255:26,0 chr1 245027203 . T . PASS END=245027203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 245027204 . G . PASS END=245027205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr1 245027206 . T . PASS END=245027206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 245027207 . C . PASS END=245027218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr1 245027219 . C . PASS END=245027220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr1 245027221 . T . LowGQ END=245027221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,693:6,0,255:17,0 chr1 245027222 . C . PASS END=245027229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,714:0,46,255:17,0 chr1 245027230 . G . PASS END=245027230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,627:0,5,255:16,0 chr1 245027231 . C . PASS END=245027235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,630:0,41,255:17,0 chr1 245027236 . T . PASS END=245027236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:15,0 chr1 245027237 . C . PASS END=245027246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:16,0 chr1 245027247 . C . PASS END=245027247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 245027248 . A . PASS END=245027274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,599:0,48,255:19,0 chr1 245027275 . G . PASS END=245027283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr1 245027284 . T . PASS END=245027284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr1 245027285 . C . PASS END=245027294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,914:0,62,255:26,0 chr1 245027295 . C . PASS END=245027305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,963:0,84,255:28,0 chr1 245027306 . C . PASS END=245027322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr1 245027323 . A . PASS END=245027323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,695:0,22,255:23,0 chr1 245027324 . T . PASS END=245027325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 245027326 . C . PASS END=245027327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr1 245027328 . T . PASS END=245027329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 245027330 . C . PASS END=245027331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,804:0,42,255:23,0 chr1 245027332 . T . PASS END=245027332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 245027333 . C . PASS END=245027339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,810:0,59,255:20,0 chr1 245027340 . T . PASS END=245027343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:21,0 chr1 245027344 . T . PASS END=245027344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:21,0 chr1 245027345 . C . PASS END=245027345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 245027346 . T . PASS END=245027346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 245027347 . T . PASS END=245027355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 245027356 . T . PASS END=245027356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 245027357 . C . PASS END=245027408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr1 245027409 . A . PASS END=245027415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr1 245027416 . T . PASS END=245027422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr1 245027423 . C . PASS END=245027425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr1 245027426 . G . PASS END=245027426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 245027427 . G . PASS END=245027437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr1 245027438 . C . PASS END=245027443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 245027444 . C . PASS END=245027444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:20,0 chr1 245027445 . G . PASS END=245027449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 245027450 . C . PASS END=245027458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr1 245027459 . G . PASS END=245027459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr1 245027460 . G . PASS END=245027505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,675:0,44,255:19,0 chr1 245027506 . A . PASS END=245027506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr1 245027507 . T . PASS END=245027514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr1 245027515 . G . PASS END=245027516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 245027517 . C . PASS END=245027517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr1 245027518 . T . PASS END=245027520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 245027521 . A . PASS END=245027521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 245027522 . G . PASS END=245027529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 245027530 . T . PASS END=245027551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr1 245027552 . G . PASS END=245027552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 245027553 . C . PASS END=245027554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr1 245027555 . C . PASS END=245027586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:13:0,32,495:0,32,255:13,0 chr1 245027587 . A . PASS END=245027587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:10,0 chr1 245027588 . C . PASS END=245027588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr1 245027589 . A . PASS END=245027609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr1 245133425 . A . PASS END=245133425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 245133426 . T . PASS END=245133451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr1 245133452 . C . PASS END=245133488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,421:0,36,255:13,0 chr1 245133489 . T G, 17.81 PASS DP=13;MQ=247.82;MQRankSum=2.451;ReadPosRankSum=0.761;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,3,0:0.231,0.000:13:3,1,0:7,2,0:18:53,0,50,107,358,465:77,0,255:9,0:1.7807e+01,7.2576e-02,5.3073e+01,1.0734e+02,3.9238e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,3,0:3,7,1,2 chr1 245133490 . G . PASS END=245133495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 245133496 . C . PASS END=245133507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:16,0 chr1 245133508 . T . PASS END=245133508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr1 245133509 . C . PASS END=245133526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:17,0 chr1 245133527 . T . PASS END=245133537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,41,255:13,0 chr1 245133538 . A . PASS END=245133538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:14,0 chr1 245133539 . A G, 103.74 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,6,0:0,13,0:54:142,57,0,695,57,695:255,57,0:0,0:1.0374e+02,5.3739e+01,1.8379e-05,4.5000e+02,8.8509e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,7:0,0,7,12 chr1 245133540 . C . PASS END=245133548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 245133549 . GGC G, 19.66 PASS DP=18;MQ=250.00;MQRankSum=2.583;ReadPosRankSum=-0.315;FractionInformativeReads=0.944;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,3,0:0.176,0.000:17:4,1,0:10,2,0:20:49,0,50,95,418,513:62,0,255:14,5:1.9658e+01,4.7268e-02,5.3047e+01,1.0079e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:10,4,0,3:8,6,2,1 chr1 245133550 . G . LowGQ END=245133552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:17:0,0,291:26,0,255:17,5 chr1 245133553 . C . PASS END=245133553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr1 245133554 . G . PASS END=245133554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 245133555 . C . PASS END=245133573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,629:0,51,255:18,0 chr1 245133574 . G . PASS END=245133574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:15,0 chr1 245133575 . C . PASS END=245133577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:16,0 chr1 245133578 . C . PASS END=245133578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr1 245133579 . G . PASS END=245133597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr1 245133598 . C . PASS END=245133598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 245133599 . T . PASS END=245133599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr1 245133600 . C . PASS END=245133602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 245133603 . C . PASS END=245133607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 245133608 . A . PASS END=245133609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:30:21:0,30,681:0,30,255:16,0 chr1 245133610 . T . PASS END=245133617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:18,0 chr1 245133618 . G . PASS END=245133618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:17,0 chr1 245133619 . C . PASS END=245133620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr1 245133621 . C . PASS END=245133621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:16,0 chr1 245133622 . C . PASS END=245133622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr1 245133623 . T TCCTCC, 34.98 PASS DP=22;MQ=248.21;MQRankSum=3.291;ReadPosRankSum=-1.880;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,5,0:0.227,0.000:22:4,3,0:13,2,0:35:64,0,50,210,714,924:114,0,255:14,5:3.4983e+01,1.4007e-03,5.3001e+01,2.1563e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:7,10,1,4:10,7,3,2 chr1 245133624 . C . LowGQ END=245133624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,504:67,0,255:19,0 chr1 245133625 . C . PASS END=245133627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 245133628 . C . PASS END=245133628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 245133629 . A . PASS END=245133630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr1 245133631 . G . PASS END=245133638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 245133639 . C . PASS END=245133639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr1 245133640 . G . PASS END=245133654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,621:0,40,255:19,0 chr1 245133655 . G . PASS END=245133659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr1 245133660 . C . PASS END=245133661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr1 245133662 . G C, 40.36 PASS DP=19;MQ=248.75;MQRankSum=1.898;ReadPosRankSum=-0.046;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,5,0:0.263,0.000:19:2,4,0:12,1,0:40:75,0,50,179,493,672:137,0,255:9,0:4.0365e+01,4.2119e-04,5.3000e+01,1.7888e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,11,2,3:9,5,1,4 chr1 245133663 . G . PASS END=245133666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr1 245133667 . A . PASS END=245133667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr1 245133668 . C . PASS END=245133668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 245133669 . C . PASS END=245133669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr1 245133670 . G . PASS END=245133684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,582:0,40,255:18,0 chr1 245133685 . G . PASS END=245133685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr1 245133686 . T . PASS END=245133699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,621:0,40,255:18,0 chr1 245133700 . G . PASS END=245133730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,668:0,41,255:18,0 chr1 245133731 . A . PASS END=245133731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 245133732 . G . PASS END=245133745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr1 245136601 . A . PASS END=245136724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:40:0,90,1350:0,116,255:40,0 chr1 245136725 . A . PASS END=245136729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:33:0,63,945:0,78,255:24,0 chr1 245165423 . G . PASS END=245165426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,582:0,12,255:17,0 chr1 245165427 . T . PASS END=245165428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr1 245165429 . G . PASS END=245165432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,839:0,33,255:24,0 chr1 245165433 . A . PASS END=245165438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,864:0,62,255:26,0 chr1 245165439 . G . PASS END=245165443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr1 245165444 . G . PASS END=245165444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr1 245165445 . A . PASS END=245165614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:33:0,93,1173:0,99,255:40,0 chr1 245180278 . A . PASS END=245180281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr1 245180544 . A . PASS END=245180596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,154,255:40,0 chr1 245180597 . G . PASS END=245180628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:45:0,87,1305:0,108,255:40,0 chr1 245222688 . A . PASS END=245222760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:95:33:0,95,1205:0,95,255:40,0 chr1 245238876 . G . PASS END=245238913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:54:0,120,1800:0,161,255:40,0 chr1 245245385 . G . PASS END=245245401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,167,255:40,0 chr1 245245402 . C T, 40.27 PASS DP=68;MQ=250.00;MQRankSum=6.702;ReadPosRankSum=4.355;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:45,23,0:0.338,0.000:68:26,8,0:19,15,0:40:75,0,50,749,1597,2346:255,0,255:40,0:4.0273e+01,4.2947e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,21,16,7:17,28,15,8:245245378 chr1 245245403 . A . PASS END=245245439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,199,255:40,0 chr1 245245440 . T . PASS END=245245464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:67:0,120,1800:0,180,255:40,0 chr1 245246744 . A . PASS END=245246786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,234,255:40,0 chr1 245246924 . G . PASS END=245247031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:51:0,120,1800:0,140,255:40,0 chr1 245247242 . G . PASS END=245247270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:80:0,120,1800:0,233,255:40,0 chr1 245250035 . G . PASS END=245250096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,133,255:40,0 chr1 245250547 . G . PASS END=245250662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:87:40:0,87,1357:0,87,255:40,0 chr1 245254329 . G . PASS END=245254333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr1 245270437 . A . PASS END=245270440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,135,255:40,0 chr1 245270441 . C G, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=3.536;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,26,0:0.531,0.000:49:10,11,0:13,15,0:48:85,0,50,914,823,1737:255,0,255:23,0:5.0000e+01,6.7045e-05,5.2670e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,10,16:15,8,11,15 chr1 245270442 . C . PASS END=245270522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:51:0,107,1800:0,107,255:40,0 chr1 245270523 . T C, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.158;ReadPosRankSum=3.699;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,28,0:0.538,0.000:52:10,11,0:14,17,0:47:85,0,47,185,185,185:255,0,255:23,0:5.0000e+01,9.0861e-05,4.9609e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,13,16,12:9,15,13,15 chr1 245270524 . G . PASS END=245270524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:36:56:0,36,1861:0,36,255:40,0 chr1 245270525 . A . PASS END=245270525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:40:55:0,40,1770:0,40,255:40,0 chr1 245287996 . A . PASS END=245288069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,0:134:99:120:0,120,1800:0,255,255:40,0 chr1 245318727 . A . PASS END=245318789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1213:0,84,255:40,0 chr1 245319584 . G . PASS END=245319588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:13,0 chr1 245319589 . T . PASS END=245319589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr1 245319590 . G . PASS END=245319590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr1 245319591 . A . PASS END=245319591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 245319592 . A . PASS END=245319601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 245319602 . C . PASS END=245319602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr1 245319603 . C . PASS END=245319609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 245319610 . G . PASS END=245319632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr1 245319633 . A . PASS END=245319633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 245319634 . A . PASS END=245319648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 245319649 . A . PASS END=245319649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:13,0 chr1 245319650 . G . PASS END=245319658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr1 245319659 . G . PASS END=245319669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 245319670 . C . PASS END=245319670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 245319671 . G . PASS END=245319672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr1 245319673 . C . PASS END=245319674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 245319675 . G . PASS END=245319675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 245319676 . C . PASS END=245319676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 245319677 . C . PASS END=245319678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr1 245319679 . G . PASS END=245319682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 245319683 . A . PASS END=245319683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 245319684 . C . PASS END=245319686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 245319687 . C . PASS END=245319687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 245319688 . T . PASS END=245319689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 245319690 . A . PASS END=245319690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 245319691 . G . PASS END=245319691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 245319692 . G . PASS END=245319693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 245319694 . C . PASS END=245319694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 245319695 . G . PASS END=245319695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr1 245319696 . C . PASS END=245319727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:17,0 chr1 245319728 . T . PASS END=245319728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:15,0 chr1 245319729 . C . PASS END=245319748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr1 245319749 . T . PASS END=245319749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr1 245319750 . C . PASS END=245319757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 245319758 . T . PASS END=245319784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr1 245319785 . T . PASS END=245319807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:19,0 chr1 245319808 . G . PASS END=245319809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr1 245319810 . C . PASS END=245319811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 245319812 . G . PASS END=245319816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 245319817 . C . PASS END=245319817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 245319818 . T . PASS END=245319821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 245319822 . G . PASS END=245319822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 245319823 . C . PASS END=245319826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,876:0,69,255:23,0 chr1 245319827 . T . PASS END=245319829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:52:23:0,52,701:0,52,255:24,0 chr1 245319830 . C . PASS END=245319849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,884:0,61,255:25,0 chr1 245319850 . C . PASS END=245319851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr1 245319852 . C . PASS END=245319854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 245319855 . G . PASS END=245319856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr1 245319857 . T . PASS END=245319861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 245319862 . C . PASS END=245319863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr1 245319864 . G . PASS END=245319864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,782:0,30,255:22,0 chr1 245319865 . C . PASS END=245319874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,815:0,69,255:23,0 chr1 245319875 . T . PASS END=245319875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr1 245319876 . C . PASS END=245319877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 245319878 . T . PASS END=245319878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr1 245319879 . C . PASS END=245319886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,825:0,72,255:24,0 chr1 245319887 . T . PASS END=245319887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr1 245319888 . C . PASS END=245319917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,833:0,72,255:24,1 chr1 245319918 . A . PASS END=245319918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 245319919 . C . PASS END=245319923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 245319924 . G . PASS END=245319924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr1 245319925 . C . PASS END=245319926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 245319927 . T . PASS END=245319927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr1 245319928 . G . PASS END=245319932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 245319933 . A . PASS END=245319933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr1 245319934 . G . PASS END=245319934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 245319935 . C . PASS END=245319956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,50,255:19,0 chr1 245319957 . T . PASS END=245319962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,495:0,31,255:13,0 chr1 245319963 . T . PASS END=245319963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr1 245319964 . C . PASS END=245319970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr1 245319971 . C . PASS END=245319985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr1 245530136 . G . PASS END=245530139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 245530140 . C . PASS END=245530154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1090:0,87,255:31,0 chr1 245530155 . T . PASS END=245530156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 245530157 . A . PASS END=245530176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1150:0,89,255:34,0 chr1 245530177 . C T, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=2.093;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,20,0:0.513,0.000:39:8,10,0:11,10,0:48:85,0,50,690,661,1351:255,0,255:20,0:5.0000e+01,6.5492e-05,5.2947e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,14,6:8,11,10,10 chr1 245530178 . C . PASS END=245530214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1413:0,87,255:40,0 chr1 245530215 . A . PASS END=245530252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:37,0 chr1 245530253 . A . PASS END=245530283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,68,255:26,0 chr1 245530284 . T . PASS END=245530284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:20,0 chr1 245530285 . G . PASS END=245530291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 245530292 . G . PASS END=245530292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 245530293 . C . PASS END=245530336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr1 245530337 . C . PASS END=245530337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr1 245530338 . C . PASS END=245530340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 245530341 . T . PASS END=245530410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,44,255:19,0 chr1 245530411 . T . PASS END=245530411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr1 245530412 . G . PASS END=245530417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr1 245530418 . G . PASS END=245530419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,537:0,12,255:18,1 chr1 245530420 . C . PASS END=245530427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr1 245530428 . C . PASS END=245530428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:16,0 chr1 245530429 . C . PASS END=245530441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:17,0 chr1 245530442 . A . PASS END=245530444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 245530445 . G . PASS END=245530448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr1 245530449 . T . PASS END=245530456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr1 245530457 . A . PASS END=245530469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr1 245530470 . A . PASS END=245530470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 245530471 . A . PASS END=245530476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr1 245530477 . C . PASS END=245530477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 245530478 . A . PASS END=245530483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr1 245530484 . G . PASS END=245530485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 245530486 . G . PASS END=245530486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr1 245530487 . G . PASS END=245530498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr1 245530499 . G . PASS END=245530504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 245530505 . A . PASS END=245530513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr1 245530514 . G . PASS END=245530516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 245530517 . T . PASS END=245530528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr1 245530529 . C . PASS END=245530529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 245530530 . A . PASS END=245530540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr1 245530541 . A . PASS END=245530541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr1 245530542 . G . PASS END=245530542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 245530543 . C . PASS END=245530543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 245530544 . C . PASS END=245530544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 245530545 . T . PASS END=245530545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 245530546 . C . PASS END=245530555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr1 245530556 . A . PASS END=245530556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 245530557 . C . PASS END=245530573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,925:0,75,255:25,0 chr1 245530574 . A . PASS END=245530575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,815:0,55,255:21,0 chr1 245530576 . C . PASS END=245530576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 245530577 . A . PASS END=245530577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr1 245530578 . T . PASS END=245530584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 245530585 . T . PASS END=245530585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr1 245530586 . T . PASS END=245530606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 245530607 . C . PASS END=245530629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr1 245530630 . C . PASS END=245530630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 245530631 . C . PASS END=245530639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 245530640 . A . PASS END=245530640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 245530641 . C . PASS END=245530643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr1 245530644 . A . PASS END=245530660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr1 245530661 . C . PASS END=245530661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:8,0 chr1 245530662 . C . PASS END=245530666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,405:0,20,255:9,0 chr1 245530667 . C . PASS END=245530669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,30,255:4,0 chr1 245582881 . A . PASS END=245582883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr1 245582884 . T . PASS END=245582885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 245582886 . C . PASS END=245582888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 245582889 . G . PASS END=245582995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1111:0,87,255:40,0 chr1 245582996 . T . PASS END=245583043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr1 245583044 . C . PASS END=245583047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:18,0 chr1 245674408 . A . PASS END=245674430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:73:0,120,1800:0,209,255:40,0 chr1 245704069 . A . PASS END=245704072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr1 245704073 . G . PASS END=245704090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1012:0,84,255:30,0 chr1 245704091 . T . PASS END=245704091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,955:0,73,255:29,0 chr1 245704092 . C . PASS END=245704092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr1 245704093 . T . PASS END=245704093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 245704094 . T . PASS END=245704129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:32:0,85,1140:0,85,255:33,0 chr1 245704130 . G C,A, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.697;ReadPosRankSum=2.863;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,20,1,0:0.606,0.030,0.000:33:6,11,1,0:6,9,0,0:46:85,0,46,679,393,478,715,429,1108,1144:255,0,255:10,0:5.0000e+01,1.0329e-04,4.8607e+01,4.5000e+02,4.2820e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:5,7,7,14:5,7,10,11 chr1 245704131 . C . PASS END=245704167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1180:0,83,255:36,0 chr1 245704168 . G . PASS END=245704187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,99,255:36,0 chr1 245704188 . C . PASS END=245704188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 245704189 . C . PASS END=245704201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:27,0 chr1 245704202 . T . PASS END=245704232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:25,0 chr1 245704233 . A . PASS END=245704247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,50,255:18,0 chr1 245704248 . G . PASS END=245704250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr1 245704251 . A . PASS END=245704252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 245765879 . G . PASS END=245765879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 245765880 . T . PASS END=245765885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:32,0 chr1 245765886 . T . PASS END=245765886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:30,0 chr1 245765887 . C . PASS END=245765981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:32:0,86,1180:0,86,255:40,0 chr1 245765982 . A . PASS END=245765982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1700:0,78,255:37,0 chr1 245765983 . T . PASS END=245766043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,102,1614:0,102,255:40,0 chr1 245766044 . A . PASS END=245766044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1342:0,57,255:39,0 chr1 245766045 . T . PASS END=245766085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1260:0,84,255:40,0 chr1 245770953 . G . PASS END=245771046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:97:43:0,97,1584:0,97,255:40,0 chr1 245772568 . G . PASS END=245772571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr1 245772572 . A . PASS END=245772575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr1 245772576 . T . PASS END=245772577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,806:0,53,255:23,0 chr1 245772578 . C . PASS END=245772578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 245772579 . A . PASS END=245772580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,823:0,55,255:24,0 chr1 245772581 . C . PASS END=245772583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr1 245772584 . G . PASS END=245772594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:29,0 chr1 245772595 . A . PASS END=245772596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr1 245772597 . G . PASS END=245772598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 245772599 . T . PASS END=245772599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:27,0 chr1 245772600 . T . PASS END=245772653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1181:0,88,255:35,0 chr1 245772654 . A . PASS END=245772654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr1 245772655 . T . PASS END=245772717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1020:0,86,255:35,0 chr1 245772718 . G . PASS END=245772718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr1 245772719 . G . PASS END=245772719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr1 245772720 . G . PASS END=245772722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr1 245772723 . A . PASS END=245772723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 245772724 . A . PASS END=245772734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,1078:0,60,255:25,0 chr1 245772735 . C . PASS END=245772737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 245772738 . C . PASS END=245772742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 245772743 . C . PASS END=245772743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 245772744 . C . PASS END=245772747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 245772748 . T . PASS END=245772757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr1 245772758 . G . PASS END=245772768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr1 245772769 . G . PASS END=245772790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:44:20:0,44,675:0,44,255:19,0 chr1 245772791 . G . PASS END=245772816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr1 245772817 . T . PASS END=245772817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr1 245772818 . C . PASS END=245772830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 245775095 . C . PASS END=245775095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr1 245775096 . T . PASS END=245775099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr1 245775100 . G . PASS END=245775100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 245775101 . A . PASS END=245775101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr1 245775102 . A . PASS END=245775103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr1 245775104 . C . PASS END=245775104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 245775105 . A . PASS END=245775108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr1 245775109 . C . PASS END=245775109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 245775110 . G . PASS END=245775125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,848:0,69,255:26,0 chr1 245775126 . C . PASS END=245775176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:38,0 chr1 245775177 . G . PASS END=245775177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr1 245775178 . C . PASS END=245775251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1227:0,81,255:40,0 chr1 245775252 . G . PASS END=245775252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:32,0 chr1 245775253 . G . PASS END=245775269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:33,0 chr1 245775270 . A . PASS END=245775276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 245775277 . A . PASS END=245775277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr1 245775278 . A . PASS END=245775278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 245809423 . T . PASS END=245809582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:31:0,93,1180:0,93,255:40,0 chr1 245847535 . A . PASS END=245847665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:30:0,81,1133:0,82,255:40,0 chr1 245847666 . G . PASS END=245847666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr1 245847667 . A . PASS END=245847669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:40:30:0,40,883:0,40,255:27,0 chr1 245847670 . C . PASS END=245847671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 245847672 . T . PASS END=245847672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr1 245847673 . G . PASS END=245847673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 245847674 . A . PASS END=245847675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr1 245847676 . G . PASS END=245847677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 245847678 . T . PASS END=245847679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:25,0 chr1 245847680 . A . PASS END=245847681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr1 245847682 . G . PASS END=245847682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,889:0,53,255:26,0 chr1 245847683 . A . PASS END=245847684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 245847685 . A . PASS END=245847685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr1 245847686 . A . PASS END=245847686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:27,0 chr1 245847687 . A . PASS END=245847687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,902:0,70,255:27,0 chr1 245847688 . G . PASS END=245847688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 245847689 . A . PASS END=245847691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,860:0,45,255:27,0 chr1 245847692 . A . PASS END=245847692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,758:0,28,255:26,0 chr1 245847693 . C . PASS END=245847693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:24,0 chr1 245847694 . G . PASS END=245847695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,954:0,67,255:26,0 chr1 245847696 . A . PASS END=245847696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,834:0,53,255:23,0 chr1 245847697 . G . PASS END=245847697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:24,0 chr1 245848707 . T . PASS END=245848724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr1 245848725 . G . PASS END=245848744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:24,0 chr1 245848745 . A . PASS END=245848745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 245848746 . G . PASS END=245848749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 245848750 . G . PASS END=245848750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 245848751 . C . PASS END=245848770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,853:0,62,255:24,0 chr1 245848771 . A . PASS END=245848771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 245848772 . G . PASS END=245848809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,914:0,62,255:24,0 chr1 245848810 . A . PASS END=245848810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 245848811 . C . PASS END=245848827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:23,0 chr1 245848828 . T . PASS END=245848829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 245848830 . T . PASS END=245848863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:23,0 chr1 245848864 . A . PASS END=245848947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,644:0,43,255:19,0 chr1 245848948 . A . PASS END=245848953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr1 245848954 . T . PASS END=245848954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr1 245848955 . C . PASS END=245848959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 245848960 . T . PASS END=245848960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 245848961 . C . PASS END=245848965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 245848966 . C . PASS END=245848968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 245848969 . C . PASS END=245848969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 245848970 . C . PASS END=245849012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,660:0,43,255:19,0 chr1 245849013 . G . PASS END=245849013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:15,0 chr1 245849014 . A . PASS END=245849028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,552:0,48,255:16,0 chr1 245849029 . A . PASS END=245849029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr1 245849030 . G . PASS END=245849032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 245849033 . A . PASS END=245849033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 245849034 . G . PASS END=245849034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 245849035 . A . PASS END=245849036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 245849037 . A . PASS END=245849037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 245849038 . G . PASS END=245849041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr1 245849042 . C . PASS END=245849042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 245849043 . T . PASS END=245849045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 245849046 . C . PASS END=245849046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr1 245849047 . T . PASS END=245849048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 245849049 . A . PASS END=245849049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr1 245849050 . A . PASS END=245849055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr1 245849056 . A . PASS END=245849057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 245849058 . A . PASS END=245849058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 245849059 . C . PASS END=245849059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,545:0,20,255:15,0 chr1 245849060 . G . PASS END=245849069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,434:0,47,255:16,0 chr1 245849070 . C . PASS END=245849070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr1 245849071 . T . PASS END=245849072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 245849073 . C . PASS END=245849088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,34,255:13,0 chr1 245849089 . G . PASS END=245849092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 245849093 . C . PASS END=245849093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 245849094 . G . PASS END=245849101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr1 245849102 . C . PASS END=245849102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 245849103 . G . PASS END=245849171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,513:0,45,255:16,0 chr1 245849172 . C . PASS END=245849174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 245849175 . C . PASS END=245849210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:19,0 chr1 245849211 . G . PASS END=245849215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr1 245849216 . T . PASS END=245849225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr1 245849226 . G . PASS END=245849230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 245849231 . T . PASS END=245849231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr1 245849232 . G . PASS END=245849240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:23,0 chr1 245849241 . G . PASS END=245849241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 245849242 . G . PASS END=245849263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,62,255:26,0 chr1 245849264 . C . PASS END=245849283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:28,0 chr1 245849284 . A . PASS END=245849284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,923:0,54,255:24,0 chr1 245849285 . G . PASS END=245849296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 245849297 . T . PASS END=245849298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr1 245849299 . A . PASS END=245849299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr1 245849300 . C . PASS END=245849305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 245849306 . T . PASS END=245849306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 245849307 . G . PASS END=245849312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 245849313 . G . PASS END=245849319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr1 245849320 . C . PASS END=245849321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 245849322 . C . PASS END=245849322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr1 245849323 . C . PASS END=245849324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 245849325 . G . PASS END=245849325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 245849326 . C . PASS END=245849328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 245849329 . A . PASS END=245849331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 245849332 . G . PASS END=245849333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 245849334 . C . PASS END=245849334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:27,0 chr1 245849335 . C . PASS END=245849335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 245849336 . C . PASS END=245849337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:27,0 chr1 245849338 . G . PASS END=245849378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1064:0,86,255:32,0 chr1 245849379 . C . PASS END=245849379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr1 245849380 . A . PASS END=245849380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 245849381 . C . PASS END=245849383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 245849384 . C . PASS END=245849390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr1 245849391 . C . PASS END=245849391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,976:0,45,255:27,0 chr1 245849392 . C . PASS END=245849401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr1 245849402 . G . PASS END=245849427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr1 245849428 . A . PASS END=245849428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr1 245849429 . G . PASS END=245849429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 245849430 . A . PASS END=245849432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,795:0,36,255:23,0 chr1 245849433 . C . PASS END=245849433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 245849434 . T . PASS END=245849434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr1 245849435 . C . PASS END=245849436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 245849437 . A . PASS END=245849440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,771:0,36,255:22,0 chr1 245849441 . C . PASS END=245849441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 245849442 . T . PASS END=245849442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,782:0,17,255:20,0 chr1 245849443 . G . PASS END=245849443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr1 245849444 . C . PASS END=245849459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 245849460 . A . PASS END=245849466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr1 245849467 . G . PASS END=245849467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:16,0 chr1 245849468 . G . PASS END=245849473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:16,0 chr1 245849474 . G . PASS END=245849474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr1 245849475 . G . PASS END=245849477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:14,0 chr1 245849478 . T . PASS END=245849478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:14,2 chr1 245849479 . C . LowGQ END=245849479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,620:9,0,255:14,2 chr1 245849480 . C . PASS END=245849480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr1 245849481 . C . PASS END=245849484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr1 245849485 . G . PASS END=245849504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 245849505 . T . PASS END=245849505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 245849506 . C . PASS END=245849527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr1 245849528 . A . PASS END=245849547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr1 245849548 . G . PASS END=245849573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,643:0,60,255:25,0 chr1 245849574 . G . PASS END=245849574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 245849575 . T . PASS END=245849586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,793:0,69,255:24,0 chr1 245849587 . C . PASS END=245849587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr1 245849588 . C . PASS END=245849589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr1 245849590 . C . PASS END=245849590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr1 245849591 . C . PASS END=245849599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 245849600 . T . PASS END=245849600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 245849601 . C . PASS END=245849607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr1 245849608 . G . PASS END=245849608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr1 245849609 . C . PASS END=245849609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 245849610 . A . PASS END=245849610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 245849611 . A . PASS END=245849627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr1 245849628 . T . PASS END=245849628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,817:0,47,255:23,0 chr1 245849629 . C . PASS END=245849632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:24,0 chr1 245849633 . G . PASS END=245849633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 245849634 . G . PASS END=245849638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr1 245849639 . C . PASS END=245849639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr1 245849640 . T . PASS END=245849669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,878:0,72,255:26,0 chr1 245849670 . G . PASS END=245849670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 245849671 . T . PASS END=245849671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:27,0 chr1 245849672 . T . PASS END=245849674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 245849675 . A . PASS END=245849676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1055:0,74,255:27,0 chr1 245849677 . T . PASS END=245849679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 245849680 . G . PASS END=245849680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr1 245849681 . C . PASS END=245849682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 245849683 . C . PASS END=245849683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:27,0 chr1 245849684 . C . PASS END=245849689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:30,0 chr1 245849690 . T . PASS END=245849690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,857:0,56,255:28,0 chr1 245849691 . T . PASS END=245849698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1080:0,90,255:30,0 chr1 245849699 . A . PASS END=245849699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:27,0 chr1 245849700 . T . PASS END=245849706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 245849707 . C . PASS END=245849707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr1 245849708 . T . PASS END=245849709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 245849710 . C . PASS END=245849713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1054:0,74,255:27,0 chr1 245849714 . G . PASS END=245849751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:32,0 chr1 245849752 . A . PASS END=245849752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr1 245849753 . G . PASS END=245849758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:32,0 chr1 245849759 . A . PASS END=245849759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:29,0 chr1 245849760 . G . PASS END=245849763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr1 245849764 . C . PASS END=245849765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:26,0 chr1 245849766 . C . PASS END=245849767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:29,0 chr1 245849768 . T . PASS END=245849768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:29,0 chr1 245849769 . T . PASS END=245849775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:29,0 chr1 245849776 . C . PASS END=245849776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 245849777 . C . PASS END=245849778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 245849779 . A . PASS END=245849779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,978:0,43,255:26,0 chr1 245849780 . G . PASS END=245849780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 245849781 . A . PASS END=245849781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr1 245849782 . A . PASS END=245849795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1163:0,80,255:31,0 chr1 245849796 . A . PASS END=245849796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 245849797 . C . PASS END=245849797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 245849798 . C . PASS END=245849799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:27,0 chr1 245849800 . C . PASS END=245849801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:29,0 chr1 245849802 . A . PASS END=245849802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr1 245849803 . T . PASS END=245849803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr1 245849804 . G . PASS END=245849808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 245849809 . C . PASS END=245849810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 245849811 . G . PASS END=245849857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:33,0 chr1 245849858 . G . PASS END=245849858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr1 245849859 . C . PASS END=245849886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,917:0,78,255:26,0 chr1 245849887 . T . PASS END=245849888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 245849889 . C . PASS END=245849896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:27:0,77,1124:0,77,255:26,0 chr1 245849897 . C . PASS END=245849897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr1 245849898 . G . PASS END=245849901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr1 245849902 . G . PASS END=245849902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 245849903 . C . PASS END=245849904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 245849905 . C . PASS END=245849907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 245849908 . C . PASS END=245849925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 245849926 . A . PASS END=245849926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr1 245849927 . C . PASS END=245849930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:24,0 chr1 245849931 . G . PASS END=245849934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr1 245849935 . G . PASS END=245849943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr1 245849944 . G . PASS END=245849972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr1 245849973 . A . PASS END=245849973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr1 245849974 . G . PASS END=245849978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr1 245849979 . A . PASS END=245849979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 245849980 . T . PASS END=245850010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr1 245850011 . C . PASS END=245850017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 245850018 . A . PASS END=245850020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 245850021 . G . PASS END=245850025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 245850026 . C . PASS END=245850026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 245850027 . G . PASS END=245850032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 245850033 . G . PASS END=245850033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 245850034 . A . PASS END=245850044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 245850045 . A . PASS END=245850050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,56,255:19,0 chr1 245850051 . T . PASS END=245850074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr1 245850075 . C . PASS END=245850081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr1 245850082 . A . PASS END=245850082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:18,0 chr1 245850083 . G . PASS END=245850085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 245850086 . G . PASS END=245850095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 245850096 . G . PASS END=245850096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr1 245850097 . C . PASS END=245850097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 245850098 . A . PASS END=245850100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 245850101 . G . PASS END=245850128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr1 245850129 . C . PASS END=245850144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:21:0,45,675:0,59,255:19,0 chr1 245850145 . C . PASS END=245850148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 245850149 . C . PASS END=245850150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 245850151 . G . PASS END=245850159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 245850160 . A . PASS END=245850184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr1 245850185 . C . PASS END=245850188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr1 245850189 . A . PASS END=245850189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 245850190 . C . PASS END=245850194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr1 245850195 . T . PASS END=245850195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 245850196 . T . PASS END=245850213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 245850214 . T . PASS END=245850214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr1 245850215 . G . PASS END=245850219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr1 245850220 . A . PASS END=245850221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 245850222 . C . PASS END=245850222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 245850223 . C . PASS END=245850263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,599:0,51,255:19,0 chr1 245850264 . G . PASS END=245850299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,884:0,63,255:25,0 chr1 245850300 . A . PASS END=245850379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,574:0,40,255:20,0 chr1 245850380 . G . PASS END=245850381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr1 245850382 . G . PASS END=245850382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr1 245850383 . C . PASS END=245850383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr1 245850384 . A . PASS END=245850387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 245850388 . C . PASS END=245850388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 245850389 . C . PASS END=245850389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 245850390 . A . PASS END=245850390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 245850391 . T . PASS END=245850391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 245850392 . G . PASS END=245850392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr1 245850393 . G . PASS END=245850396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 245850397 . C . PASS END=245850397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 245850398 . C . PASS END=245850404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr1 245850405 . A . PASS END=245850405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr1 245850406 . A . PASS END=245850408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:18,0 chr1 245850409 . C . PASS END=245850409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 245850410 . G . PASS END=245850431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,675:0,43,255:19,0 chr1 245850432 . G . PASS END=245850432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr1 245850433 . G . PASS END=245850449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,535:0,41,255:15,0 chr1 245850450 . A . PASS END=245850450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr1 245850451 . C . PASS END=245850451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 245850452 . C . PASS END=245850452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 245850453 . A . PASS END=245850453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 245850454 . A . PASS END=245850462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 245850463 . T . PASS END=245850463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,382:0,3,255:10,0 chr1 245850464 . T . PASS END=245850464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 245850465 . T . PASS END=245850465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 245850466 . A . PASS END=245850472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr1 245850473 . C . PASS END=245850473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr1 245850474 . A . PASS END=245850485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr1 245850486 . C . PASS END=245850489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 245850490 . G . PASS END=245850490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr1 245850491 . G . PASS END=245850499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 245850500 . A . PASS END=245850500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr1 245850501 . G . PASS END=245850502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 245850503 . G . PASS END=245850506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 245850507 . G . PASS END=245850512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 245850513 . C . PASS END=245850517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr1 245850518 . C . PASS END=245850518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 245850519 . G . PASS END=245850521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 245850522 . A . PASS END=245850530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 245850531 . G . PASS END=245850531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:9,0 chr1 245850532 . C . PASS END=245850539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 245850540 . A . PASS END=245850542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 245850543 . T . PASS END=245850543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr1 245850544 . T . PASS END=245850554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:12,0 chr1 245850555 . C . PASS END=245850555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr1 245850556 . G . PASS END=245850562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr1 245850563 . T . PASS END=245850564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:23:13:0,23,441:0,23,255:14,0 chr1 245850565 . A . PASS END=245850570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 245850571 . A . PASS END=245850571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:14,0 chr1 245850572 . C . PASS END=245850635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr1 245850636 . G . PASS END=245850636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 245850637 . A . PASS END=245850650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:15,0 chr1 245850651 . A . PASS END=245850651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:12,0 chr1 245850652 . A . PASS END=245850652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 245850653 . T . PASS END=245850653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 245850654 . G . PASS END=245850657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 245850658 . A . PASS END=245850662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr1 245850663 . A . PASS END=245850668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr1 245850669 . A . PASS END=245850670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 245850671 . G . PASS END=245850674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 245850675 . G . PASS END=245850677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 245850678 . A . PASS END=245850688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,527:0,45,255:15,0 chr1 245850689 . C . PASS END=245850698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 245850699 . G . PASS END=245850701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr1 245850702 . G . PASS END=245850703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 245850704 . G . PASS END=245850723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr1 245850724 . A . PASS END=245850724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr1 245850725 . G . PASS END=245850749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,848:0,63,255:25,0 chr1 245850750 . A . PASS END=245850750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr1 245850751 . G . PASS END=245850753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr1 245850754 . T . PASS END=245850758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr1 245850759 . A . PASS END=245850759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 245850760 . G . PASS END=245850760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 245850761 . C . PASS END=245850765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 245850766 . G . PASS END=245850771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 245850772 . A . PASS END=245850794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr1 245850795 . G . PASS END=245850795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 245850796 . A . PASS END=245850818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,886:0,72,255:25,0 chr1 245850819 . G . PASS END=245850819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr1 245850820 . G . PASS END=245850853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,847:0,66,255:23,0 chr1 245850854 . G . PASS END=245850858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,59,255:19,0 chr1 245850859 . C . PASS END=245850888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr1 245850889 . G . PASS END=245850895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 245850896 . T . PASS END=245850897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 245850898 . C . PASS END=245850942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,44,255:19,0 chr1 245850943 . T . PASS END=245850943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 245850944 . C . PASS END=245850946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 245850947 . C . PASS END=245850947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,595:0,38,255:13,0 chr1 245850948 . T . PASS END=245850950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 245850951 . T . PASS END=245850958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,490:0,31,255:13,0 chr1 245850959 . T . PASS END=245850959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 245850960 . G . PASS END=245850961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 245850962 . T . PASS END=245850962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 245850963 . G . PASS END=245850977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr1 245850978 . G . PASS END=245850978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr1 245850979 . G . PASS END=245850990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 245850991 . G . PASS END=245850992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 245850993 . A . PASS END=245850993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr1 245850994 . C . PASS END=245851000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 245851001 . C . PASS END=245851003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 245851004 . C . PASS END=245851004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr1 245851005 . A . PASS END=245851017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 245851018 . A . PASS END=245851081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:13,0 chr1 245851082 . C . PASS END=245851093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr1 245851094 . G . PASS END=245851103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 245851104 . G . PASS END=245851124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 245851125 . C . PASS END=245851144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,394:0,33,255:12,0 chr1 245851145 . C . LowGQ END=245851145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr1 245851146 . A . PASS END=245851171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr1 245851172 . A . PASS END=245851172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr1 245851173 . C . PASS END=245851266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr1 245851267 . A . PASS END=245851290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr1 245851291 . T . PASS END=245851291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr1 245851292 . G . PASS END=245851297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 245851298 . G . PASS END=245851303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 245851304 . A G, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,9,0:0,6,0:42:130,45,0,579,45,579:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,5:0,0,8,7 chr1 245851305 . G . PASS END=245851336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 245851337 . G . PASS END=245851337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr1 245851338 . G . PASS END=245851341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 245851342 . A . PASS END=245851374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,568:0,40,255:19,0 chr1 245851375 . C . PASS END=245851375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:15,0 chr1 245851376 . G . PASS END=245851393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:17:0,42,630:0,43,255:17,0 chr1 245851394 . G . PASS END=245851394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr1 245851395 . C . PASS END=245851396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 245851397 . C . PASS END=245851397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 245851398 . C . PASS END=245851399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr1 245851400 . C . PASS END=245851400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 245851401 . G . PASS END=245851436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:16,0 chr1 245851437 . C . PASS END=245851437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 245851438 . C . PASS END=245851446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr1 245851447 . C . PASS END=245851447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr1 245851448 . C . PASS END=245851472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:18,0 chr1 245851473 . T . PASS END=245851473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr1 245851474 . C . PASS END=245851474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr1 245851475 . C . PASS END=245851479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr1 245851480 . T . PASS END=245851480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,515:0,23,255:16,0 chr1 245851481 . C . PASS END=245851481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 245851482 . T . PASS END=245851482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 245851483 . C . PASS END=245851608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,582:0,41,255:19,0 chr1 245851609 . C . PASS END=245851719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr1 245851720 . T . PASS END=245851720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 245851721 . G . PASS END=245851739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 245851740 . C . PASS END=245851750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 245851751 . G . PASS END=245851753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr1 245851754 . G . PASS END=245851754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr1 245851755 . C . PASS END=245851778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 245851779 . C . PASS END=245851779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 245851780 . G . PASS END=245851780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 245851781 . C . PASS END=245851790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr1 245851791 . C . PASS END=245851817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,349:0,27,255:9,0 chr1 245851818 . C . PASS END=245851819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 245851820 . C . PASS END=245851850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,620:0,41,255:19,0 chr1 245851851 . C . PASS END=245851856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:23,0 chr1 245851857 . C T, 29.08 PASS DP=22;MQ=250.00;MQRankSum=3.022;ReadPosRankSum=1.490;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,4,0:0.182,0.000:22:12,3,0:6,1,0:29:64,0,50,143,644,787:102,0,255:18,0:2.9080e+01,5.3928e-03,5.3005e+01,1.4298e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,6,2,2:12,6,3,1 chr1 245851858 . G . PASS END=245851864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr1 245851865 . C . PASS END=245851865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr1 245851866 . C . PASS END=245851871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 245851872 . T . PASS END=245851872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr1 245851873 . G . PASS END=245851894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,833:0,72,255:24,0 chr1 245851895 . C . PASS END=245851898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 245851899 . A . PASS END=245851900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr1 245851901 . C . PASS END=245851921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,929:0,62,255:25,0 chr1 245851922 . C . PASS END=245851922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 245851923 . C . PASS END=245851923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 245851924 . C . PASS END=245851932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:29,0 chr1 245851933 . T . PASS END=245851933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 245851934 . G . PASS END=245851945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:30,0 chr1 245851946 . C . PASS END=245851946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr1 245851947 . C . PASS END=245851947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 245851948 . T . PASS END=245851948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 245851949 . G . PASS END=245851955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1117:0,80,255:28,0 chr1 245851956 . C . PASS END=245852030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,845:0,62,255:27,0 chr1 245852031 . G . PASS END=245852031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 245852032 . A . PASS END=245852035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 245852036 . C . PASS END=245852039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 245852040 . A . PASS END=245852053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 245852054 . C . PASS END=245852055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 245852056 . C . PASS END=245852059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 245852060 . G . PASS END=245852066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr1 245852067 . A . PASS END=245852067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:17,0 chr1 245852068 . G . PASS END=245852109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,675:0,41,255:19,0 chr1 245861408 . G . PASS END=245861416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr1 245861417 . G . PASS END=245861417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr1 245861418 . A . PASS END=245861418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,591:0,43,255:19,0 chr1 245861419 . C . PASS END=245861428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr1 245861429 . T . PASS END=245861429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 245861430 . C . PASS END=245861437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr1 245861438 . T . PASS END=245861438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 245861439 . A . PASS END=245861439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,892:0,34,255:25,0 chr1 245861440 . T . PASS END=245861449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 245861450 . C . PASS END=245861467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr1 245861468 . A . PASS END=245861505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr1 245861506 . C . PASS END=245861527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr1 245861528 . G . PASS END=245861533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr1 245861534 . G . PASS END=245861556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,33,255:13,0 chr1 245861557 . T . PASS END=245861563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 245861564 . T . PASS END=245861570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 245861571 . C T, 40.41 PASS DP=12;MQ=250.00;MQRankSum=2.404;ReadPosRankSum=1.109;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,3,0:0.250,0.000:12:4,1,0:5,2,0:40:75,0,50,107,322,429:72,0,255:9,0:4.0408e+01,4.1704e-04,5.3000e+01,1.0729e+02,3.5661e+02,4.3210e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,0,3:7,2,2,1 chr1 245861572 . G . PASS END=245861583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 245861584 . C . PASS END=245861608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:8:0,24,288:0,24,255:9,0 chr1 245861609 . A . PASS END=245861610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr1 245862189 . G . PASS END=245862216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1188:0,86,255:37,0 chr1 245862217 . A . PASS END=245862217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr1 245862218 . G . PASS END=245862307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,106,1405:0,106,255:40,0 chr1 245862308 . G . PASS END=245862308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1457:0,68,255:39,0 chr1 245862309 . A . PASS END=245862338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:37:0,84,1290:0,84,255:39,0 chr1 245862339 . T . PASS END=245862339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:30,0 chr1 245865760 . T . PASS END=245865769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,859:0,81,255:29,0 chr1 245865770 . G . PASS END=245865771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 245865772 . A . PASS END=245865813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1177:0,80,255:33,0 chr1 245865814 . A . PASS END=245865827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:28:0,69,1035:0,84,255:26,0 chr1 245865828 . C . PASS END=245865845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 245865846 . A . PASS END=245865846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr1 245865847 . A . PASS END=245865849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr1 245865850 . T . PASS END=245865850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr1 245865851 . C . PASS END=245865855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 245865856 . A . PASS END=245865859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 245865860 . C . PASS END=245865861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 245865862 . A . PASS END=245865862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr1 245865863 . T . PASS END=245865867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1063:0,84,255:28,0 chr1 245865868 . T . PASS END=245865908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,901:0,75,255:26,0 chr1 245912865 . T . PASS END=245912966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:48:0,118,1800:0,118,255:40,0 chr1 245927343 . C . PASS END=245927343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1296:0,94,255:36,0 chr1 245927344 . A . PASS END=245927344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:35,0 chr1 245927345 . G . PASS END=245927425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1215:0,106,255:40,0 chr1 245927426 . C . PASS END=245927451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,955:0,78,255:26,0 chr1 246021798 . C . PASS END=246021813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,102,1349:0,105,255:37,0 chr1 246021814 . T . PASS END=246021850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,110,1557:0,110,255:40,0 chr1 246021851 . G A, 49.24 PASS DP=53;MQ=250.00;MQRankSum=6.209;ReadPosRankSum=3.136;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,24,0:0.453,0.000:53:11,11,0:18,13,0:48:84,0,50,858,1037,1895:255,0,255:28,0:4.9242e+01,7.3517e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,17,16,8:14,15,13,11 chr1 246021852 . A . PASS END=246021888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,143,255:40,0 chr1 246021889 . T . PASS END=246021903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,120,1800:0,136,255:40,0 chr1 246021904 . T . PASS END=246021940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,111,1721:0,111,255:40,0 chr1 246021941 . T C, 181.97 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,20,0:0,25,0:132:220,135,0,1708,135,1708:255,135,0:0,0:1.8197e+02,1.3197e+02,0.0000e+00,4.5000e+02,1.6674e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,28:0,0,24,21 chr1 246021942 . G . PASS END=246021970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,87,255:40,0 chr1 246021971 . C . PASS END=246021972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:25,0 chr1 246027101 . T . PASS END=246027188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,135,255:40,0 chr1 246078832 . C . PASS END=246078930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,114,1800:0,114,255:40,0 chr1 246078931 . G . PASS END=246078942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,99,1485:0,138,255:40,0 chr1 246091233 . C . PASS END=246091236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,737:0,54,255:19,0 chr1 246091237 . T . PASS END=246091263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,730:0,63,255:26,0 chr1 246091264 . C . PASS END=246091264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr1 246091265 . G . PASS END=246091265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr1 246091266 . C . PASS END=246091271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr1 246091272 . G . PASS END=246091272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr1 246091273 . A . PASS END=246091280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 246091281 . C . PASS END=246091292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:26,0 chr1 246091293 . A . PASS END=246091293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:23,0 chr1 246091294 . A . PASS END=246091300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:23,0 chr1 246091301 . A . PASS END=246091301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr1 246091302 . G . PASS END=246091302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:20,0 chr1 246091303 . T . PASS END=246091311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr1 246091312 . C . PASS END=246091314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 246091315 . C . PASS END=246091316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 246091317 . G . PASS END=246091317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr1 246091318 . T . PASS END=246091320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 246091321 . T . PASS END=246091321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr1 246091322 . T . PASS END=246091335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 246092814 . G . PASS END=246092836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,111,1667:0,111,255:40,0 chr1 246093172 . C . PASS END=246093239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,189,255:40,0 chr1 246116533 . C . PASS END=246116553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,203,255:40,2 chr1 246271382 . A . PASS END=246271387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr1 246271388 . C G, 49.16 PASS DP=51;MQ=249.98;MQRankSum=6.086;ReadPosRankSum=1.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,23,0:0.451,0.000:51:13,12,0:15,11,0:48:84,0,50,815,1001,1816:255,0,255:27,0:4.9160e+01,7.4552e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,15,8:11,17,10,13 chr1 246271389 . G . PASS END=246271425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,143,255:40,0 chr1 246271426 . A . PASS END=246271486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,164,255:40,0 chr1 246489680 . T . PASS END=246489681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:84:73:0,84,1260:0,202,255:29,0 chr1 246489682 . A . PASS END=246489685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:63:73:0,63,945:0,203,255:23,0 chr1 246489686 . C . PASS END=246489687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:42:73:0,42,630:0,219,255:18,0 chr1 246489688 . T . PASS END=246489692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:30:72:0,30,450:0,200,255:12,0 chr1 246489693 . A . PASS END=246489693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:24:72:0,24,360:0,216,255:8,0 chr1 246489694 . T . PASS END=246489697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:18:72:0,18,270:0,200,255:6,0 chr1 246490503 . T . PASS END=246490639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:39:0,87,1474:0,87,255:40,0 chr1 246493782 . T . PASS END=246493839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,110,1800:0,110,255:40,0 chr1 246498669 . A . PASS END=246498776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,137,255:40,0 chr1 246518333 . C . PASS END=246518396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,126,255:40,0 chr1 246670356 . C . PASS END=246670359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 246670360 . G . PASS END=246670360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr1 246670361 . A . LowGQ END=246670361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,474:26,0,255:17,0 chr1 246670362 . A . PASS END=246670364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,737:0,49,255:20,0 chr1 246670365 . C . PASS END=246670367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 246670368 . C . PASS END=246670368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 246670369 . G . PASS END=246670369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:18,0 chr1 246670370 . G . PASS END=246670370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 246670371 . T . PASS END=246670371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 246670372 . C . PASS END=246670372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:20,0 chr1 246670373 . G . PASS END=246670377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,754:0,66,255:22,0 chr1 246670378 . C . PASS END=246670378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 246670379 . G . PASS END=246670379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 246670380 . A . PASS END=246670381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,798:0,50,255:23,0 chr1 246670382 . G . PASS END=246670382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:21,0 chr1 246670383 . C . PASS END=246670385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 246670386 . C . PASS END=246670386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 246670387 . G . PASS END=246670389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 246670390 . T . PASS END=246670390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr1 246670391 . C . PASS END=246670397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:24:0,66,972:0,68,255:27,0 chr1 246670398 . C . PASS END=246670398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 246670399 . A . PASS END=246670399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr1 246670400 . C . PASS END=246670400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 246670401 . A . PASS END=246670404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1002:0,70,255:25,0 chr1 246670405 . T . PASS END=246670412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:28,0 chr1 246670413 . A . PASS END=246670413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr1 246670414 . A . PASS END=246670426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:30,0 chr1 246670427 . G . PASS END=246670427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr1 246670428 . A . PASS END=246670432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr1 246670433 . T . PASS END=246670433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1019:0,62,255:29,0 chr1 246670434 . A . PASS END=246670443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:30,0 chr1 246670444 . G . PASS END=246670446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 246670447 . G . PASS END=246670465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,930:0,62,255:26,0 chr1 246670466 . C . PASS END=246670467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:22,0 chr1 246670468 . G . PASS END=246670468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 246670469 . C . PASS END=246670470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 246670471 . C . PASS END=246670480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr1 246670481 . C G, 46.71 PASS DP=24;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=3.160;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:7,5,0:8,4,0:46:81,0,50,322,519,841:255,0,255:14,0:4.6708e+01,1.1442e-04,5.3000e+01,3.2186e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,1,8:11,4,5,4 chr1 246670482 . T . PASS END=246670492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,860:0,69,255:23,0 chr1 246670493 . G . PASS END=246670518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,53,255:21,0 chr1 246670519 . T . PASS END=246670519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:12,0 chr1 246704333 . C . PASS END=246704504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,114,1649:0,119,255:40,0 chr1 246707823 . C . PASS END=246707857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,102,1676:0,102,255:40,0 chr1 246707858 . A G, 50.00 PASS DP=75;MQ=250.00;MQRankSum=7.392;ReadPosRankSum=4.991;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,38,0:0.514,0.000:74:19,22,0:17,16,0:48:85,0,50,1351,1251,2602:255,0,255:36,0:5.0000e+01,6.5492e-05,5.2928e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,11,27,11:16,20,21,17 chr1 246707859 . A . PASS END=246707895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,188,255:40,0 chr1 246707896 . T . PASS END=246707983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:56:0,120,1800:0,155,255:40,0 chr1 246711847 . C . PASS END=246711862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,132,255:40,0 chr1 246711863 . T . PASS END=246711909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,99,1485:0,117,255:40,0 chr1 246714515 . C . PASS END=246714549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,3:83:99:73:0,120,1800:0,185,255:40,0 chr1 246714550 . A . PASS END=246714586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:71:0,120,1800:0,198,255:40,0 chr1 246714587 . G A, 46.90 PASS DP=71;MQ=248.47;MQRankSum=5.726;ReadPosRankSum=1.152;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,29,0:0.408,0.000:71:18,14,0:24,15,0:46:82,0,50,962,1493,2456:255,0,255:36,0:4.6905e+01,1.1028e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,25,11,18:23,19,12,17 chr1 246714588 . G . PASS END=246714604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,182,255:40,0 chr1 246719875 . C . PASS END=246719880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,132,255:40,0 chr1 246719881 . T . PASS END=246719881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1606:0,61,255:40,0 chr1 246719882 . T . PASS END=246720022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:36:0,95,1291:0,95,255:40,0 chr1 246720023 . T . PASS END=246720023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:32,0 chr1 246720683 . C . PASS END=246720760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,117,1755:0,126,255:40,0 chr1 246720761 . C . PASS END=246720797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:43:0,99,1485:0,119,255:40,0 chr1 246720798 . G A, 175.50 PASS DP=43;MQ=199.49;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,26,0:0,17,0:125:213,129,0,1601,129,1601:255,129,0:0,0:1.7550e+02,1.2550e+02,0.0000e+00,4.5000e+02,1.6027e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,24:0,0,24,19 chr1 246720799 . A . PASS END=246720830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr1 246720831 . T . PASS END=246720835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:24,0 chr1 246720836 . A . PASS END=246720836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr1 246727648 . C . PASS END=246727736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:46:0,117,1755:0,124,255:40,0 chr1 246729128 . C . PASS END=246729131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:18,0 chr1 246729132 . A . PASS END=246729132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr1 246729133 . T . PASS END=246729146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr1 246729147 . T . PASS END=246729178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,709:0,60,255:25,0 chr1 246729179 . A . PASS END=246729179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 246729180 . G . PASS END=246729203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:24,0 chr1 246729204 . T . PASS END=246729204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr1 246729205 . C . PASS END=246729216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr1 246729217 . A . PASS END=246729217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 246729218 . C . PASS END=246729218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 246729219 . G . PASS END=246729219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 246729220 . T . PASS END=246729238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr1 246729239 . T . PASS END=246729280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,53,255:19,0 chr1 246729281 . C . PASS END=246729281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr1 246729282 . G . PASS END=246729287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr1 246729288 . C . PASS END=246729300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:11,0 chr1 246729301 . G . PASS END=246729320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,496:0,42,255:19,0 chr1 246729321 . G . PASS END=246729321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:17,0 chr1 246729322 . T . PASS END=246729335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr1 246729336 . A . PASS END=246729336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr1 246729337 . T . PASS END=246729368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,615:0,40,255:19,0 chr1 246729369 . G . PASS END=246729370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr1 246729371 . A . PASS END=246729423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:17,0 chr1 246729424 . A . PASS END=246729440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr1 246754865 . A . PASS END=246754880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,925:0,69,255:26,0 chr1 246754881 . C . PASS END=246755086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:31:0,93,1125:0,93,255:40,0 chr1 246755087 . T . PASS END=246755123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1296:0,94,255:37,0 chr1 246755124 . T C, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,19,0:0,17,0:105:193,108,0,1396,108,1396:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,16:0,0,19,17 chr1 246755125 . G . PASS END=246755153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:36,0 chr1 246755154 . A . PASS END=246755154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1277:0,78,255:28,0 chr1 246755155 . T . PASS END=246755161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:31,0 chr1 246755162 . G . PASS END=246755165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,102,255:30,0 chr1 246755166 . T . PASS END=246755166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1056:0,69,255:27,0 chr1 246755167 . C . PASS END=246755224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1111:0,86,255:34,0 chr1 246755225 . G . PASS END=246755241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr1 246755242 . A . PASS END=246755243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr1 246781691 . A . PASS END=246781703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,138,255:40,0 chr1 246784731 . G . PASS END=246784753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,876:0,62,255:26,0 chr1 246784754 . C . PASS END=246784924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1025:0,87,255:40,0 chr1 246784925 . T . PASS END=246784936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:26,0 chr1 246795196 . A . PASS END=246795226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:98:0,120,1800:0,255,255:40,0 chr1 246797226 . A . PASS END=246797312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,108,1730:0,108,255:40,0 chr1 246797775 . A . PASS END=246797889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:59:0,120,1800:0,154,255:40,0 chr1 246805051 . T . PASS END=246805072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:104:0,120,1800:0,255,255:40,0 chr1 246805243 . A . PASS END=246805335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,85,255:40,0 chr1 246805336 . T . PASS END=246805336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 246805337 . C . PASS END=246805339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 246810441 . A . PASS END=246810450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,700:0,63,255:22,0 chr1 246810451 . T . PASS END=246810451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:20,0 chr1 246810452 . T . PASS END=246810461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:24,0 chr1 246810462 . C . PASS END=246810462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr1 246810463 . A . PASS END=246810465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr1 246810466 . G . PASS END=246810466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr1 246810467 . T . PASS END=246810475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,869:0,75,255:25,0 chr1 246810476 . G . PASS END=246810476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr1 246810477 . A . PASS END=246810478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 246810479 . A . PASS END=246810479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr1 246810480 . G . PASS END=246810483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr1 246810484 . A . PASS END=246810487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 246810488 . A . PASS END=246810490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr1 246810491 . G . PASS END=246810498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1194:0,83,255:29,0 chr1 246810499 . C . PASS END=246810499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr1 246810500 . C . PASS END=246810510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1033:0,87,255:30,0 chr1 246810511 . T . PASS END=246810511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 246810512 . C . PASS END=246810514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 246810515 . T . PASS END=246810539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,866:0,65,255:26,0 chr1 246810540 . C . PASS END=246810561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1070:0,84,255:29,0 chr1 246810562 . A . PASS END=246810562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 246810563 . A . PASS END=246810571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 246810572 . A . PASS END=246810572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 246810573 . A . PASS END=246810576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 246810577 . C . PASS END=246810586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 246810587 . G . PASS END=246810589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 246810590 . C . PASS END=246810601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr1 246810602 . G . PASS END=246810604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr1 246810605 . G . PASS END=246810693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,847:0,62,255:26,0 chr1 246810694 . C . PASS END=246810694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 246810695 . A . PASS END=246810703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 246810704 . C . PASS END=246810705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 246810706 . G . PASS END=246810707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:23,0 chr1 246810708 . T . PASS END=246810708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr1 246810709 . G . PASS END=246810713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr1 246810714 . A . PASS END=246810714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr1 246810715 . A . PASS END=246810716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:74:25:0,74,751:0,74,255:25,0 chr1 246810717 . C . PASS END=246810717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,768:0,42,255:23,0 chr1 246810718 . A . PASS END=246810718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr1 246810719 . G . PASS END=246810719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 246810720 . A . PASS END=246810726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,832:0,61,255:28,0 chr1 246810727 . C . PASS END=246810728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 246810729 . A . PASS END=246810730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr1 246810731 . G . PASS END=246810732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 246810733 . T . PASS END=246810733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr1 246810734 . G . PASS END=246810734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 246810735 . T . PASS END=246810735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr1 246810736 . G . PASS END=246810737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 246810738 . C . PASS END=246810738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr1 246810739 . C . PASS END=246810745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr1 246810746 . G . PASS END=246810746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr1 246810747 . A . PASS END=246810749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr1 246810750 . G . PASS END=246810752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1047:0,60,255:28,0 chr1 246810753 . T . PASS END=246810761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1194:0,83,255:30,0 chr1 246810762 . A . PASS END=246810762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,969:0,57,255:26,0 chr1 246810763 . C . PASS END=246810769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:29,0 chr1 246810770 . G . PASS END=246810770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:28,0 chr1 246810771 . T . PASS END=246810774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 246810775 . T . PASS END=246810775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:28,0 chr1 246810776 . C . PASS END=246810801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,90,255:35,0 chr1 246810802 . G . PASS END=246810802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr1 246810803 . T . PASS END=246810809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1278:0,92,255:34,0 chr1 246810810 . C . PASS END=246810810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:17:37:0,17,1097:0,17,255:33,0 chr1 246810811 . A . PASS END=246810816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1258:0,94,255:35,0 chr1 246810817 . C . PASS END=246810817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:35,0 chr1 246810818 . T . PASS END=246810997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:37:0,87,1391:0,87,255:40,0 chr1 246810998 . G . PASS END=246810999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:33,0 chr1 246811000 . G . PASS END=246811005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:42:0,87,1395:0,87,255:34,0 chr1 246811006 . T . PASS END=246811006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1341:0,62,255:31,0 chr1 246811007 . G . PASS END=246811007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr1 246811008 . A . PASS END=246811008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1473:0,71,255:36,0 chr1 246811009 . C . PASS END=246811014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:43:0,80,1497:0,80,255:40,0 chr1 246811015 . C . PASS END=246811015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1504:0,77,255:38,0 chr1 246811016 . G . PASS END=246811119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:40:0,80,1391:0,80,255:40,0 chr1 246811120 . A . PASS END=246811120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1281:0,79,255:40,0 chr1 246811121 . C . PASS END=246811217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,108,1514:0,108,255:40,0 chr1 246811218 . A . PASS END=246811218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:34,0 chr1 246811219 . C . PASS END=246811302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1305:0,93,255:39,0 chr1 246811303 . T . PASS END=246811303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:28,0 chr1 246811304 . C . PASS END=246811311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 246811312 . T . PASS END=246811312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:29,0 chr1 246811313 . C . PASS END=246811314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 246811315 . T . PASS END=246811315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 246811316 . G . PASS END=246811319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 246811320 . A . PASS END=246811335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:24:0,63,945:0,72,255:24,0 chr1 246811336 . A . PASS END=246811354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr1 246823501 . G . PASS END=246823503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 246823504 . G . PASS END=246823504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr1 246823505 . T . PASS END=246823509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:29,0 chr1 246823510 . A . PASS END=246823510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 246823511 . C . PASS END=246823636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:80:32:0,80,1185:0,80,255:40,0 chr1 246829002 . A . PASS END=246829005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,909:0,65,255:26,0 chr1 246829006 . A . PASS END=246829179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,976:0,84,255:40,0 chr1 246829180 . A . PASS END=246829180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:27,0 chr1 246829181 . C . PASS END=246829183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 246829184 . A . PASS END=246829184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 246829185 . A . PASS END=246829185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 246829186 . G . PASS END=246829186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 246829187 . C . PASS END=246829187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 246829188 . A . PASS END=246829200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:25,0 chr1 246829201 . C . PASS END=246829202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 246829203 . C . PASS END=246829204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr1 246829205 . T . PASS END=246829205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr1 246829206 . A . PASS END=246829207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr1 246887725 . A . PASS END=246887740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 246887741 . G . PASS END=246887741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 246887742 . G . PASS END=246887743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 246887744 . C . PASS END=246887744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 246887745 . T . PASS END=246887749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 246887750 . A . PASS END=246887750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 246887751 . C . PASS END=246887760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 246887761 . T . PASS END=246887761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr1 246887762 . T . PASS END=246887778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr1 246887779 . A . PASS END=246887781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 246887782 . G . PASS END=246887785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 246887786 . A . PASS END=246887786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 246887787 . G . PASS END=246887805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr1 246887806 . G . PASS END=246887806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 246887807 . C . PASS END=246887843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,405:0,36,255:13,0 chr1 246887844 . G . PASS END=246887844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 246887845 . C . PASS END=246887845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr1 246887846 . C . PASS END=246887864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:16,0 chr1 246887865 . C . PASS END=246887865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr1 246887866 . T . PASS END=246887867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr1 246887868 . C . PASS END=246887869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 246887870 . G . PASS END=246887872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr1 246887873 . A . PASS END=246887873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 246887874 . G . PASS END=246887874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr1 246887875 . A . PASS END=246887875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr1 246887876 . A . PASS END=246887883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 246887884 . C . PASS END=246887887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr1 246887888 . T . PASS END=246887907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:9:0,21,315:0,22,255:9,0 chr1 246887908 . A . PASS END=246887914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 246890194 . G . PASS END=246890195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr1 246890196 . A . PASS END=246890306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:38:0,84,1260:0,114,255:40,0 chr1 246899277 . T . PASS END=246899357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,115,1800:0,115,255:40,0 chr1 246903474 . T . PASS END=246903603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:39:0,90,1332:0,90,255:40,0 chr1 246907378 . G . PASS END=246907427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:72:0,120,1800:0,187,255:40,0 chr1 246921528 . G . PASS END=246921658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:37:0,99,1426:0,101,255:40,1 chr1 246922336 . G . PASS END=246922453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,118,1800:0,118,255:40,0 chr1 246923259 . G . PASS END=246923378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:40:0,101,1512:0,101,255:40,0 chr1 246923473 . T . PASS END=246923529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:70:0,120,1800:0,153,255:40,0 chr1 246927548 . A . PASS END=246927659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,120,1800:0,158,255:40,0 chr1 246929360 . A . PASS END=246929441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:35:0,91,1242:0,91,255:40,0 chr1 246930497 . G . PASS END=246930602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:52:0,117,1755:0,120,255:40,0 chr1 247004108 . T . PASS END=247004286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:30:0,80,1202:0,80,255:40,0 chr1 247004287 . C . PASS END=247004288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1025:0,73,255:27,0 chr1 247004289 . T . PASS END=247004300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,987:0,84,255:28,0 chr1 247005996 . T . PASS END=247006078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:78:0,120,1800:0,211,255:40,0 chr1 247007097 . C . PASS END=247007099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,682:0,44,255:19,0 chr1 247007100 . T . PASS END=247007118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:22,0 chr1 247007119 . T . PASS END=247007119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr1 247007120 . T . PASS END=247007135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,915:0,72,255:26,0 chr1 247007136 . T . PASS END=247007141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:28,0 chr1 247007142 . G . PASS END=247007142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr1 247007143 . C . PASS END=247007218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:28:0,81,1031:0,81,255:37,0 chr1 247007219 . C . PASS END=247007219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr1 247007220 . T . PASS END=247007221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr1 247007222 . T . PASS END=247007222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr1 247007223 . T . PASS END=247007223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1048:0,90,255:30,0 chr1 247007224 . T . PASS END=247007224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr1 247007225 . T . PASS END=247007226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 247007227 . T . PASS END=247007227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr1 247007228 . T . PASS END=247007228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:29,0 chr1 247007229 . A . PASS END=247007230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr1 247012917 . C . PASS END=247012934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,900:0,72,255:24,0 chr1 247012935 . C . PASS END=247013479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,1011:0,84,255:40,0 chr1 247013480 . A . PASS END=247013481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:69:51:0,69,1335:0,69,255:40,0 chr1 247013482 . T . PASS END=247013505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,136,255:40,0 chr1 247013506 . A . PASS END=247013542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,147,255:40,0 chr1 247013543 . T C, 47.95 PASS DP=61;MQ=110.70;MQRankSum=0.830;ReadPosRankSum=4.860;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,29,0:0.475,0.000:61:17,16,0:15,13,0:46:83,0,48,1037,1070,2107:255,0,255:31,0:4.7953e+01,1.0303e-04,5.1150e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,7,18,11:16,16,15,14 chr1 247013544 . C . PASS END=247013580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,145,255:40,0 chr1 247013581 . A . PASS END=247013803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:35:0,81,1215:0,96,255:40,0 chr1 247013804 . A . PASS END=247013813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 247013814 . C . PASS END=247013816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr1 247013817 . G . PASS END=247013836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:25,0 chr1 247013837 . T . PASS END=247013841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr1 247013842 . T . PASS END=247013842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr1 247013843 . A . PASS END=247013853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,721:0,47,255:18,0 chr1 247013854 . A . PASS END=247013854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr1 247013855 . A . PASS END=247013861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr1 247013862 . T . PASS END=247013862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr1 247013863 . C . PASS END=247013870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr1 247013871 . T . PASS END=247013871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr1 247013872 . T . PASS END=247013874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,645:0,54,255:18,0 chr1 247013875 . T . PASS END=247013875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,529:0,10,255:15,0 chr1 247013876 . C . PASS END=247013900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,662:0,47,255:19,0 chr1 247013901 . G . PASS END=247013909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 247013910 . G . PASS END=247013915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr1 247013916 . G . PASS END=247013935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr1 247013936 . G . PASS END=247013937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 247013938 . A . PASS END=247013939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr1 247013940 . A . PASS END=247013942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr1 247013943 . T . PASS END=247013943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:27,0 chr1 247013944 . G . PASS END=247013944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 247013945 . T . PASS END=247013945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:26,0 chr1 247013946 . T . PASS END=247013964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 247013965 . T . PASS END=247013965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 247013966 . T . PASS END=247013969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 247013970 . T . PASS END=247013970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 247013971 . T . PASS END=247014064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:34,0 chr1 247014065 . T . PASS END=247014065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:28,0 chr1 247014066 . T . PASS END=247014075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1319:0,92,255:33,0 chr1 247014076 . T . PASS END=247014076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1113:0,75,255:29,0 chr1 247014077 . T . PASS END=247014146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1305:0,87,255:40,0 chr1 247014147 . T . PASS END=247014147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1584:0,69,255:40,0 chr1 247014148 . T . PASS END=247014744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:31:0,87,1250:0,89,255:40,0 chr1 247016393 . A . PASS END=247016403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 247016404 . G . PASS END=247016404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 247016405 . A . PASS END=247016406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 247016407 . T . PASS END=247016412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:21,0 chr1 247016413 . G . PASS END=247016413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr1 247016414 . A . PASS END=247016418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr1 247016419 . T . PASS END=247016419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr1 247016420 . G . PASS END=247016423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr1 247016424 . G . PASS END=247016445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr1 247016446 . G . PASS END=247016446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 247016447 . T . PASS END=247016460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,892:0,61,255:24,0 chr1 247016461 . C . PASS END=247016461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr1 247016462 . T . PASS END=247016471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr1 247016472 . C . PASS END=247016472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr1 247016473 . C . PASS END=247016473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 247016474 . A . PASS END=247016474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:23,0 chr1 247016475 . A . PASS END=247016537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,861:0,62,255:25,0 chr1 247016538 . A . PASS END=247016538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr1 247016539 . C . PASS END=247016567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 247016568 . G . PASS END=247016592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr1 247016593 . C . PASS END=247016601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 247019032 . A . PASS END=247019129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,102,1338:0,102,255:40,0 chr1 247020993 . C . PASS END=247020994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:25,0 chr1 247020995 . T . PASS END=247021047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1009:0,84,255:40,0 chr1 247021048 . A . PASS END=247021084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,114,1710:0,122,255:40,0 chr1 247021085 . G C, 47.11 PASS DP=44;MQ=206.40;MQRankSum=0.036;ReadPosRankSum=1.492;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,18,0:0.409,0.000:44:14,9,0:12,9,0:46:82,0,50,643,930,1573:255,0,255:25,0:4.7113e+01,1.0613e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,3,15:13,13,8,10 chr1 247021086 . A . PASS END=247021116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,99,255:39,0 chr1 247024201 . C . PASS END=247024206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 247024207 . G . PASS END=247024217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:23,0 chr1 247024218 . T . PASS END=247024218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 247024219 . C . PASS END=247024227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,860:0,69,255:26,0 chr1 247024228 . T . PASS END=247024233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr1 247024234 . C . PASS END=247024248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr1 247024249 . C . PASS END=247024251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247024252 . T . PASS END=247024252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,984:0,48,255:27,0 chr1 247024253 . A . PASS END=247024253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 247024254 . T . PASS END=247024254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:28,0 chr1 247024255 . C . PASS END=247024269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr1 247024270 . T . PASS END=247024270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr1 247024271 . T . PASS END=247024299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1150:0,86,255:35,0 chr1 247024300 . T . PASS END=247024303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:29,0 chr1 247024304 . A . PASS END=247024336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:31:0,66,990:0,88,255:26,0 chr1 247024337 . C . PASS END=247024345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:54:35:0,54,810:0,89,255:18,0 chr1 247024346 . GTCT G, 44.25 PASS DP=38;MQ=57.05;MQRankSum=1.561;ReadPosRankSum=-1.387;FractionInformativeReads=0.895;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:7,8,0:12,7,0:42:73,0,44,630,1201,1831:255,0,255:19,21:4.4249e+01,2.4748e-04,4.7125e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:11,8,8,7:9,10,7,8 chr1 247024347 . T . LowGQ END=247024350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:20,21:41:0:34:0,0,0:255,0,255:32,21 chr1 247024351 . C . PASS END=247024396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:86:34:0,86,1225:0,86,255:40,0 chr1 247024397 . G . PASS END=247024593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:37:0,87,1305:0,111,255:40,0 chr1 247024594 . C . PASS END=247024597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1125:0,93,255:26,0 chr1 247025261 . C . PASS END=247025266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr1 247025267 . A . PASS END=247025267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 247025268 . A . PASS END=247025285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,771:0,69,255:23,0 chr1 247025286 . T . PASS END=247025286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:21,0 chr1 247025287 . C . PASS END=247025305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,763:0,69,255:23,0 chr1 247025306 . T . PASS END=247025306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr1 247025307 . C . PASS END=247025308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr1 247025309 . A . PASS END=247025309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr1 247025310 . G . PASS END=247025310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr1 247025311 . T . PASS END=247025311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 247025312 . T . PASS END=247025312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 247025313 . T . PASS END=247025313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr1 247025314 . C . PASS END=247025317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr1 247025318 . A . PASS END=247025318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 247025319 . A . PASS END=247025319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr1 247025320 . G . PASS END=247025320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr1 247025321 . T . PASS END=247025322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,850:0,75,255:25,0 chr1 247025323 . G . PASS END=247025329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr1 247025330 . A . PASS END=247025377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,886:0,62,255:26,0 chr1 247025378 . A . PASS END=247025378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:23,0 chr1 247025379 . G . PASS END=247025383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,876:0,61,255:25,0 chr1 247025384 . C . PASS END=247025384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247025385 . C . PASS END=247025390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr1 247025391 . A . PASS END=247025424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,668:0,41,255:19,0 chr1 247025425 . T . PASS END=247025431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 247025432 . T . PASS END=247025432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr1 247025433 . G . PASS END=247025436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 247025437 . T . PASS END=247025437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 247025438 . G . PASS END=247025455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 247027226 . C . PASS END=247027241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,100,1690:0,100,255:40,0 chr1 247027242 . G . PASS END=247027403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:36:0,93,1395:0,93,255:40,0 chr1 247027404 . A . PASS END=247027404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr1 247027405 . C . PASS END=247027418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:32,0 chr1 247030546 . C . PASS END=247030622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1120:0,83,255:37,0 chr1 247030623 . C . PASS END=247030633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:30:0,60,900:0,90,255:23,0 chr1 247030634 . A . PASS END=247030637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:21:0,52,776:0,52,255:19,0 chr1 247030638 . T . PASS END=247030642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 247030643 . C . PASS END=247030653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,698:0,46,255:18,0 chr1 247030963 . C . PASS END=247031101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:39:0,88,1404:0,88,255:40,0 chr1 247031102 . T . PASS END=247031102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:34,0 chr1 247031103 . G . PASS END=247031103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr1 247031104 . G . PASS END=247031104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:33,0 chr1 247031105 . G . PASS END=247031106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:37:0,101,1426:0,101,255:34,0 chr1 247031107 . C . PASS END=247031107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:32,0 chr1 247031108 . T . PASS END=247031109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:34,0 chr1 247031110 . G . PASS END=247031111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:37:0,75,1286:0,75,255:33,0 chr1 247031112 . A . PASS END=247031113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,99,1485:0,108,255:34,0 chr1 247039339 . C . PASS END=247039459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:32:0,82,953:0,82,255:40,0 chr1 247039460 . T . PASS END=247039460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:35:36:0,35,892:0,35,255:31,0 chr1 247039461 . C . PASS END=247039488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1080:0,80,255:36,0 chr1 247039489 . T . PASS END=247039489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:26,0 chr1 247040252 . C . PASS END=247040383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,121,255:40,0 chr1 247040460 . C . PASS END=247040600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:84:48:0,84,1260:0,104,255:40,0 chr1 247040601 . A . PASS END=247040604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:63:41:0,63,945:0,123,255:23,0 chr1 247048795 . C . PASS END=247048795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 247048796 . T . PASS END=247048796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr1 247048797 . A . PASS END=247048814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 247048815 . G . PASS END=247048816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1064:0,62,255:30,0 chr1 247048817 . G . PASS END=247048825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1091:0,83,255:32,0 chr1 247048826 . T . PASS END=247048826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1025:0,52,255:27,0 chr1 247048827 . A . PASS END=247048830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1350:0,102,255:33,0 chr1 247048831 . T . PASS END=247048831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1225:0,64,255:32,0 chr1 247048832 . C . PASS END=247048868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1164:0,83,255:36,0 chr1 247048869 . A . PASS END=247048869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:28,0 chr1 247048870 . T . PASS END=247048872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1203:0,88,255:31,0 chr1 247048873 . C . PASS END=247048873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:31,0 chr1 247048874 . T . PASS END=247048877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:34,0 chr1 247048878 . G . PASS END=247048878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:30,0 chr1 247048879 . G . PASS END=247048890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1183:0,91,255:33,0 chr1 247048891 . T . PASS END=247048891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1197:0,78,255:31,0 chr1 247048892 . C . PASS END=247048900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:34:0,91,1124:0,91,255:35,0 chr1 247048901 . T . PASS END=247048901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:33,0 chr1 247048902 . C . PASS END=247048906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1063:0,88,255:35,0 chr1 247048907 . A . PASS END=247048907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1130:0,66,255:34,0 chr1 247048908 . T . PASS END=247048908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1108:0,55,255:32,0 chr1 247048909 . G . PASS END=247048912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,104,255:34,0 chr1 247048913 . G . PASS END=247048913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:38:35:0,38,926:0,38,255:30,0 chr1 247048914 . A . PASS END=247048915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 247048916 . T . PASS END=247048916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1050:0,71,255:32,0 chr1 247048917 . A . PASS END=247048919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr1 247048920 . C . PASS END=247048920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1002:0,74,255:32,0 chr1 247048921 . T . PASS END=247048922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 247048923 . T . PASS END=247048924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,993:0,71,255:31,0 chr1 247048925 . A . PASS END=247048930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1123:0,85,255:32,0 chr1 247048931 . G . PASS END=247048931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1020:0,68,255:28,0 chr1 247048932 . C . PASS END=247048940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1022:0,82,255:31,0 chr1 247048941 . A . PASS END=247048941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:29:32:0,29,825:0,29,255:24,0 chr1 247048942 . G . PASS END=247048942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 247048943 . G . PASS END=247048943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,924:0,79,255:27,0 chr1 247048944 . T . PASS END=247048946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 247048947 . T . PASS END=247048947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 247048948 . G . PASS END=247048949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 247048950 . A . PASS END=247048950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,698:0,4,255:23,0 chr1 247048951 . G . PASS END=247048951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,756:0,37,255:25,0 chr1 247048952 . T . PASS END=247048954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr1 247048955 . C . PASS END=247048955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,687:0,34,255:25,0 chr1 247048956 . T . PASS END=247048957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr1 247048958 . G . PASS END=247048958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,677:0,17,255:24,0 chr1 247048959 . A . PASS END=247048959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,779:0,50,255:26,0 chr1 247048960 . T . PASS END=247048960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 247048961 . G . PASS END=247048961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:16:28:0,16,486:0,16,255:22,0 chr1 247048962 . A . PASS END=247048971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr1 247048972 . T . PASS END=247048972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,648:0,31,255:20,0 chr1 247048973 . C . PASS END=247048982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,796:0,64,255:23,0 chr1 247050513 . C . PASS END=247050659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:83:41:0,83,1620:0,83,255:40,0 chr1 247051479 . A . PASS END=247051535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,140,255:40,0 chr1 247051696 . A . PASS END=247051727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,116,1498:0,116,255:40,0 chr1 247051728 . C . PASS END=247051728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:21:50:0,21,1273:0,21,255:40,0 chr1 247051729 . T . PASS END=247051807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:36:0,90,1350:0,92,255:40,0 chr1 247051808 . T . PASS END=247051819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:29:0,72,1080:0,87,255:26,0 chr1 247053268 . C . PASS END=247053285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,981:0,84,255:31,0 chr1 247053286 . T . PASS END=247053286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 247053287 . T . PASS END=247053293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:33,0 chr1 247053294 . A . PASS END=247053294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:31,0 chr1 247053295 . C . PASS END=247053326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:33:0,94,1207:0,94,255:36,0 chr1 247053327 . G . PASS END=247053327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:33,0 chr1 247053328 . T . PASS END=247053341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,92,255:34,0 chr1 247053342 . T . PASS END=247053344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,80,255:25,0 chr1 247053345 . C . PASS END=247053360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:21:0,45,675:0,56,255:19,0 chr1 247053361 . T . PASS END=247053361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,622:0,24,255:17,0 chr1 247054258 . C . PASS END=247054357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:37:0,90,1245:0,101,255:40,0 chr1 247054358 . C . PASS END=247054362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:33:0,72,1080:0,95,255:25,0 chr1 247055081 . C . PASS END=247055107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,801:0,61,255:26,0 chr1 247055108 . A . PASS END=247055121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:31,0 chr1 247055122 . A . PASS END=247055122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,980:0,60,255:29,0 chr1 247055123 . A . PASS END=247055130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1022:0,90,255:33,0 chr1 247055131 . T . PASS END=247055138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 247055139 . G . PASS END=247055152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:33,0 chr1 247055153 . A . PASS END=247055153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr1 247055154 . G . PASS END=247055166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:33,0 chr1 247055167 . G . PASS END=247055174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 247055175 . A . PASS END=247055176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 247055177 . T . PASS END=247055177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,794:0,72,255:26,0 chr1 247055178 . T . PASS END=247055180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 247055181 . T . PASS END=247055181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr1 247055182 . G . PASS END=247055182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr1 247055183 . G . PASS END=247055208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr1 247055209 . A . PASS END=247055209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 247055210 . A . PASS END=247055210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 247055211 . T . PASS END=247055221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:19,0 chr1 247057961 . A . PASS END=247058050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,103,1539:0,103,255:40,0 chr1 247059137 . C . PASS END=247059227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:52:0,115,1800:0,115,255:40,0 chr1 247061510 . T . PASS END=247061619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1185:0,80,255:40,0 chr1 247061620 . T . PASS END=247061620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr1 247061621 . C . PASS END=247061626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 247061627 . A . PASS END=247061634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:26,0 chr1 247061635 . A . PASS END=247061638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:31:0,54,810:0,77,255:19,0 chr1 247062753 . C . PASS END=247062814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,144,255:40,0 chr1 247063367 . C . PASS END=247063424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1236:0,90,255:40,0 chr1 247063425 . T . PASS END=247063425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1430:0,77,255:40,0 chr1 247063426 . C . PASS END=247063548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:46:0,83,1549:0,83,255:40,0 chr1 247063639 . C . PASS END=247063733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1215:0,83,255:40,0 chr1 247063734 . C . PASS END=247063737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr1 247063738 . G . PASS END=247063742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr1 247063743 . G . PASS END=247063744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr1 247063745 . C . PASS END=247063745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 247063746 . T . PASS END=247063767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,884:0,61,255:26,0 chr1 247063768 . A . PASS END=247063768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr1 247063769 . G . PASS END=247063769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 247063770 . A . PASS END=247063770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr1 247063771 . G . PASS END=247063771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 247065827 . C . PASS END=247065837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,917:0,64,255:25,0 chr1 247065838 . C . PASS END=247065840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:29,0 chr1 247065841 . T . PASS END=247065841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1103:0,47,255:30,0 chr1 247065842 . C . PASS END=247065859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,105,1303:0,105,255:39,0 chr1 247065860 . A . PASS END=247065860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1151:0,70,255:35,0 chr1 247065861 . T . PASS END=247065964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:34:0,81,1215:0,86,255:40,0 chr1 247065965 . A . PASS END=247065970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:26,0 chr1 247065971 . C . PASS END=247065977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:22:0,45,675:0,65,255:18,0 chr1 247067251 . C . PASS END=247067335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,139,255:40,0 chr1 247068843 . C . PASS END=247068959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,99,1485:0,101,255:40,0 chr1 247070853 . T . PASS END=247071034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1183:0,82,255:40,0 chr1 247071035 . T . PASS END=247071049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,68,255:24,0 chr1 247071050 . A . PASS END=247071050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr1 247071051 . A . PASS END=247071053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 247071054 . T . PASS END=247071060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,46,255:19,0 chr1 247076534 . C . PASS END=247076548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr1 247076549 . C . PASS END=247076549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr1 247076550 . A . PASS END=247076552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1131:0,90,255:30,0 chr1 247076553 . T . PASS END=247076553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 247076554 . T . PASS END=247076705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:30:0,81,965:0,83,255:40,0 chr1 247076706 . A . PASS END=247076714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,70,255:24,0 chr1 247079444 . C . PASS END=247079455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 247079456 . A . PASS END=247079456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:13,0 chr1 247079457 . A . PASS END=247079474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr1 247079475 . T . PASS END=247079475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr1 247079476 . T . PASS END=247079477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr1 247079478 . G . PASS END=247079490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr1 247079491 . C . PASS END=247079493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:14:0,31,543:0,31,255:14,0 chr1 247079494 . A . PASS END=247079506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 247079507 . A . PASS END=247079508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr1 247079509 . T . PASS END=247079513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr1 247079514 . T . PASS END=247079514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr1 247079515 . C . PASS END=247079516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 247079517 . G . PASS END=247079525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr1 247079526 . A . PASS END=247079526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 247079527 . A . PASS END=247079528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 247079529 . C . PASS END=247079529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 247079530 . C . PASS END=247079544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:15,0 chr1 247079545 . T . PASS END=247079545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 247079546 . T . PASS END=247079547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:15,0 chr1 247079548 . T . PASS END=247079548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 247079549 . C . PASS END=247079557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 247079558 . A . PASS END=247079559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 247079560 . A . PASS END=247079560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:12,0 chr1 247079561 . G . PASS END=247079565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 247079566 . C . PASS END=247079575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 247079576 . T . PASS END=247079578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,35,255:13,0 chr1 247079579 . A . PASS END=247079586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:16,0 chr1 247079587 . G . PASS END=247079587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr1 247079588 . A . PASS END=247079604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,615:0,43,255:19,0 chr1 247079605 . C . PASS END=247079611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr1 247079612 . T . PASS END=247079612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr1 247079613 . C . PASS END=247079614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr1 247079615 . G . PASS END=247079615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr1 247079616 . T . PASS END=247079618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr1 247079619 . G . PASS END=247079619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 247079620 . C . PASS END=247079626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr1 247079627 . T . PASS END=247079627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:23,0 chr1 247079628 . C . PASS END=247079630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,884:0,61,255:25,0 chr1 247079631 . T . PASS END=247079631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:24,0 chr1 247079632 . C . PASS END=247079643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr1 247079644 . A . PASS END=247079644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr1 247079645 . G . PASS END=247079645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 247079646 . T . PASS END=247079646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,642:0,38,255:22,0 chr1 247079647 . T . PASS END=247079649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:23,0 chr1 247079650 . C . PASS END=247079650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:21,0 chr1 247079651 . T . PASS END=247079651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr1 247079652 . A . PASS END=247079652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr1 247079653 . C . PASS END=247079657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 247079658 . A . PASS END=247079658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr1 247079659 . G . PASS END=247079664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 247079665 . G . PASS END=247079665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr1 247079666 . A . PASS END=247079669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 247079670 . C . PASS END=247079670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 247079671 . A . PASS END=247079682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 247079683 . C . PASS END=247079683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr1 247079684 . A . PASS END=247079685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 247079686 . G . PASS END=247079686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 247079687 . T . PASS END=247079688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 247079689 . C . PASS END=247079696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr1 247079697 . C . PASS END=247079697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 247081552 . C . PASS END=247081679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:37:0,80,1144:0,80,255:40,0 chr1 247094431 . T . PASS END=247094483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr1 247094484 . C . PASS END=247094484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 247094485 . A . PASS END=247094490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 247094491 . G . PASS END=247094491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr1 247094492 . C . PASS END=247094506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr1 247094507 . A . PASS END=247094528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,437:0,39,255:13,0 chr1 247094610 . C . PASS END=247094617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,352:0,33,255:11,0 chr1 247094618 . C . PASS END=247094618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr1 247094619 . T . PASS END=247094628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:13,0 chr1 247094629 . T . PASS END=247094629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr1 247109099 . T . PASS END=247109129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,162,255:40,0 chr1 247150269 . T . PASS END=247150392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:33:0,81,1215:0,83,255:40,0 chr1 247150393 . T . PASS END=247150393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:26,0 chr1 247150394 . G . PASS END=247150402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr1 247150403 . C . PASS END=247150427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr1 247150428 . G . PASS END=247150428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:21,0 chr1 247150429 . G . PASS END=247150432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,900:0,72,255:24,0 chr1 247150433 . T . PASS END=247150433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:23,0 chr1 247150434 . C . PASS END=247150450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:24,0 chr1 247150451 . T . PASS END=247150453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr1 247150454 . T . PASS END=247150454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:18,0 chr1 247150455 . A . PASS END=247150460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr1 247150461 . A . PASS END=247150461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 247150462 . G . PASS END=247150462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr1 247150463 . T . PASS END=247150503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,817:0,66,255:24,0 chr1 247150504 . C . PASS END=247150506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr1 247150507 . T . PASS END=247150507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr1 247150508 . T . PASS END=247150702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:34:0,82,1227:0,82,255:40,0 chr1 247150703 . T . PASS END=247150739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,102,1800:0,102,255:40,0 chr1 247150740 . T C, 200.50 PASS DP=51;MQ=247.18;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,31,0:0,20,0:150:238,154,0,1974,154,1974:255,159,0:0,0:2.0050e+02,1.5050e+02,0.0000e+00,4.5000e+02,1.8527e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,21:0,0,22,29 chr1 247150741 . T . PASS END=247150777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,102,1668:0,102,255:40,0 chr1 247150778 . T . PASS END=247150920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:44:0,80,1521:0,80,255:40,0 chr1 247150921 . T . PASS END=247150921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1673:0,75,255:40,0 chr1 247150922 . C . PASS END=247151114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1288:0,81,255:40,0 chr1 247151115 . A . PASS END=247151115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1446:0,63,255:34,0 chr1 247151116 . T . PASS END=247151119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:42:0,88,1462:0,88,255:36,0 chr1 247151120 . T . PASS END=247151121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:40:0,78,1170:0,103,255:26,0 chr1 247151122 . C . PASS END=247151130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:42:0,92,1316:0,92,255:33,0 chr1 247151131 . T . PASS END=247151131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:30,0 chr1 247151132 . C . PASS END=247151519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:36:0,82,1272:0,82,255:40,0 chr1 247151520 . C . PASS END=247151539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:33:0,84,1260:0,91,255:32,0 chr1 247151540 . T . PASS END=247151556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:67:26:0,67,938:0,67,255:25,0 chr1 247151557 . A G, 124.79 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,14,0:0,12,0:75:163,78,0,971,78,971:255,78,0:0,0:1.2479e+02,7.4788e+01,2.5886e-07,4.5000e+02,1.0956e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,20:0,0,8,18 chr1 247162650 . C . PASS END=247162657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,153,255:40,0 chr1 247162658 . C T, 207.21 PASS DP=54;MQ=249.27;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,24,0:0,30,0:157:245,160,0,1923,160,1923:255,162,0:0,0:2.0721e+02,1.5721e+02,0.0000e+00,4.5000e+02,1.9198e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,14:0,0,22,32 chr1 247162659 . T . PASS END=247162695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,155,255:40,0 chr1 247162696 . C . PASS END=247162742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:36:0,91,1226:0,91,255:40,0 chr1 247163214 . T . PASS END=247163214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 247163215 . G . PASS END=247163224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr1 247163225 . A . PASS END=247163241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr1 247163242 . A . PASS END=247163243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247163244 . C . PASS END=247163246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr1 247163247 . C . PASS END=247163248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247163249 . C . PASS END=247163250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr1 247163251 . A . PASS END=247163262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 247163263 . G . PASS END=247163263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 247163264 . T . PASS END=247163278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,962:0,90,255:32,0 chr1 247163279 . A . PASS END=247163279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1100:0,49,255:29,0 chr1 247163280 . A . PASS END=247163298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1215:0,83,255:32,0 chr1 247163299 . A . PASS END=247163299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:26,0 chr1 247163300 . C . PASS END=247163303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr1 247163304 . G . PASS END=247163304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 247163305 . C . PASS END=247163305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr1 247163306 . T . PASS END=247163306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 247163307 . G . PASS END=247163311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr1 247163312 . G . PASS END=247163312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:28,0 chr1 247163313 . G . PASS END=247163319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:30,0 chr1 247163320 . G . PASS END=247163327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:25,0 chr1 247163328 . A . PASS END=247163328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:23,0 chr1 247163329 . C . PASS END=247163342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr1 247163343 . A . PASS END=247163343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 247163344 . T . PASS END=247163354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr1 247163355 . C . PASS END=247163376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr1 247171208 . C . PASS END=247171210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr1 247200751 . T . PASS END=247200756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,840:0,61,255:26,0 chr1 247200757 . C . PASS END=247201729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:82:29:0,82,1082:0,82,255:40,0 chr1 247202112 . C . PASS END=247202172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:76:0,120,1800:0,211,255:40,0 chr1 247202713 . C . PASS END=247202828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1153:0,80,255:40,0 chr1 247202829 . G . PASS END=247202829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr1 247202830 . A . PASS END=247202839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 247241896 . C . PASS END=247241898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:34,0 chr1 247263676 . T . PASS END=247263971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:87:32:0,87,1286:0,89,255:40,0 chr1 247263972 . A . PASS END=247263972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1219:0,77,255:31,0 chr1 247263973 . T . PASS END=247263999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,102,255:35,0 chr1 247264000 . A . PASS END=247264000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 247264001 . G . PASS END=247264611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:30:0,81,1081:0,88,255:40,0 chr1 247264612 . G . PASS END=247264621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1016:0,71,255:26,0 chr1 247265033 . C . PASS END=247265093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:71:0,120,1800:0,184,255:40,0 chr1 247265289 . C . PASS END=247265315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr1 247265316 . C . PASS END=247265317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 247265318 . T . PASS END=247265318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 247265319 . G . PASS END=247265326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,815:0,66,255:25,0 chr1 247265327 . T . PASS END=247265327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,813:0,45,255:24,0 chr1 247265328 . C . PASS END=247265344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr1 247265345 . T . PASS END=247265345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,837:0,44,255:24,0 chr1 247265346 . G . PASS END=247265366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,945:0,75,255:25,0 chr1 247265367 . A . PASS END=247265367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 247265368 . T . PASS END=247265375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr1 247265376 . G . PASS END=247265377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 247265378 . G . PASS END=247265380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 247265381 . A . PASS END=247265415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,637:0,54,255:19,0 chr1 247267241 . C . PASS END=247267273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr1 247267274 . C A, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=2.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,8,0:0.615,0.000:13:1,4,0:4,4,0:48:85,0,48,286,179,465:255,0,155:5,0:5.0000e+01,7.4293e-05,5.1482e+01,2.8616e+02,2.1357e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,4,4:2,3,8,0 chr1 247267275 . T . PASS END=247267281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 247267282 . G . PASS END=247267307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr1 247267308 . A . PASS END=247267311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:38:16:0,38,585:0,38,255:14,0 chr1 247267312 . G . PASS END=247267369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:16,0 chr1 247267370 . G . PASS END=247267375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr1 247267376 . G . PASS END=247267376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr1 247267377 . C . PASS END=247267420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr1 247267421 . T . PASS END=247267421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 247267422 . G . PASS END=247267432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr1 247267433 . T . PASS END=247267439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 247267440 . A . PASS END=247267440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr1 247267441 . C . PASS END=247267442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 247267443 . G . PASS END=247267450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr1 247267451 . C . PASS END=247267485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 247267486 . G . PASS END=247267501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,186:5,0 chr1 247274813 . T . PASS END=247274831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr1 247274832 . G . PASS END=247274860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr1 247274861 . G . PASS END=247274861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 247274862 . A . PASS END=247274898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 247274899 . A G, 50.00 PASS DP=11;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=0.466;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,6,0:0.545,0.000:11:2,3,0:3,3,0:48:85,0,50,214,179,393:177,0,139:5,0:5.0000e+01,6.6269e-05,5.2803e+01,2.1445e+02,2.1355e+02,3.9623e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,4,2:2,3,3,3 chr1 247274900 . A . PASS END=247274905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247274906 . A . PASS END=247274926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,319:0,27,255:9,0 chr1 247274927 . G . PASS END=247274934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247274935 . G . PASS END=247274936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 247274937 . G . PASS END=247274941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247274942 . C . LowGQ END=247274942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:9,0 chr1 247274943 . T . PASS END=247274946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247274947 . C . PASS END=247274948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247274949 . C . PASS END=247274949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 247274950 . C . PASS END=247274950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247274951 . G . PASS END=247274951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:8,0 chr1 247274952 . G . PASS END=247274953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247274954 . G . PASS END=247274955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247274956 . C . LowGQ END=247274956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr1 247274957 . G . PASS END=247274957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247274958 . G . PASS END=247274958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 247274959 . G . PASS END=247274959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247274960 . G . PASS END=247274960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 247274961 . C . PASS END=247274961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247274962 . C . PASS END=247274962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 247274963 . C . LowGQ END=247274963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr1 247274964 . G . PASS END=247274972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:11,0 chr1 247274973 . G . PASS END=247274973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr1 247274974 . T . PASS END=247274975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 247274976 . G . PASS END=247274976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr1 247274977 . C . PASS END=247274984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 247274985 . G . PASS END=247274989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr1 247274990 . T . PASS END=247275000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 247275001 . C . PASS END=247275001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:7,0 chr1 247275002 . G . PASS END=247275002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247275003 . T . PASS END=247275013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr1 247275014 . G . PASS END=247275015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 247275016 . C . PASS END=247275016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 247275017 . G . PASS END=247275017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 247275018 . C . PASS END=247275018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 247275019 . C . PASS END=247275019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,272:0,13,255:9,0 chr1 247275020 . T . PASS END=247275023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,283:0,30,255:10,0 chr1 247275024 . A . PASS END=247275026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247275027 . T . PASS END=247275027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:6,0 chr1 247275028 . C . PASS END=247275028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:9,0 chr1 247275029 . G . PASS END=247275029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 247275030 . T . PASS END=247275030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:9,0 chr1 247275031 . A . PASS END=247275031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,327:0,6,255:8,0 chr1 247275032 . G . PASS END=247275032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 247275033 . G . PASS END=247275033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr1 247275034 . C . PASS END=247275034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 247275035 . A . PASS END=247275035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,356:0,19,255:9,0 chr1 247275036 . C . PASS END=247275040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr1 247275041 . C . PASS END=247275041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr1 247275042 . G . PASS END=247275042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr1 247275043 . C . PASS END=247275043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:9,0 chr1 247275044 . G . PASS END=247275045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr1 247275046 . T . PASS END=247275046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:10,0 chr1 247275047 . G . PASS END=247275053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr1 247275054 . G . PASS END=247275060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247275061 . G . LowGQ END=247275061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,304:6,0,255:10,0 chr1 247275062 . G . PASS END=247275066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247275067 . A . PASS END=247275067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 247275068 . G . PASS END=247275073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr1 247275074 . C . PASS END=247275089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr1 247275090 . G . PASS END=247275102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,341:0,27,255:9,0 chr1 247275103 . C . PASS END=247275103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 247275104 . A . PASS END=247275116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr1 247275117 . G . PASS END=247275117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 247275118 . G . PASS END=247275118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 247275119 . G . PASS END=247275120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 247275121 . A . PASS END=247275121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247275122 . G . PASS END=247275130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr1 247275131 . G . PASS END=247275138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr1 247275139 . C . PASS END=247275139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 247275140 . C . PASS END=247275167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr1 247275168 . C . PASS END=247275177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr1 247275178 . A . PASS END=247275178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:10,0 chr1 247275179 . G . PASS END=247275201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr1 247275202 . T . LowGQ END=247275202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:9,0 chr1 247275203 . C . PASS END=247275204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 247275205 . C . PASS END=247275219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr1 247275220 . C . PASS END=247275230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr1 247275231 . G . PASS END=247275262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:9,0 chr1 247275263 . G . PASS END=247275269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:7:0,15,225:0,21,249:6,0 chr1 247275270 . G . PASS END=247275270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:4,0 chr1 247275271 . T . PASS END=247275302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,188:0,18,188:6,0 chr1 247275303 . G . PASS END=247275341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,217:0,21,217:9,0 chr1 247275342 . C . PASS END=247275380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr1 247275381 . C . PASS END=247275388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 247275389 . C . PASS END=247275392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 247275393 . T . PASS END=247275408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr1 247275409 . C . PASS END=247275410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 247275411 . A . PASS END=247275411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr1 247275412 . G . PASS END=247275412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 247275413 . G . PASS END=247275414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr1 247275415 . G . PASS END=247275454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,566:0,41,255:19,0 chr1 247275455 . G . PASS END=247275455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 247275456 . G . PASS END=247275460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 247275461 . C . PASS END=247275465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 247275466 . T . PASS END=247275466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 247275467 . C . PASS END=247275468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr1 247275469 . C . PASS END=247275477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,714:0,46,255:19,0 chr1 247275478 . T . PASS END=247275478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:17,0 chr1 247275479 . G . PASS END=247275479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 247275480 . G . PASS END=247275489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 247275490 . G . PASS END=247275526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr1 247287170 . T . PASS END=247287173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:137,0:137:99:135:0,120,1800:0,255,255:40,0 chr1 247302044 . T . PASS END=247302059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:104:0,120,1800:0,255,255:40,0 chr1 247319868 . T . PASS END=247319871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:32,0 chr1 247319872 . A . PASS END=247319872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 247319873 . T . PASS END=247320116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1215:0,82,255:40,2 chr1 247320117 . T . PASS END=247320117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 247320118 . T . PASS END=247320125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr1 247320126 . T . PASS END=247320136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 247320137 . G . PASS END=247320186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1208:0,83,255:34,0 chr1 247320187 . A . PASS END=247320187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:33,0 chr1 247320188 . G . PASS END=247320229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1239:0,86,255:35,0 chr1 247320230 . T . PASS END=247320230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1085:0,36,255:30,0 chr1 247320231 . C . PASS END=247320255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,95,255:34,0 chr1 247320256 . T . PASS END=247320256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 247320257 . A . PASS END=247320274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 247320275 . A . PASS END=247320275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr1 247320276 . A . PASS END=247320282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 247320283 . G . PASS END=247320283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:27,0 chr1 247320284 . C . PASS END=247320289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:33,0 chr1 247320290 . C . PASS END=247320290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr1 247320291 . A . PASS END=247320313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,98,255:35,0 chr1 247320314 . T . PASS END=247320314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1214:0,72,255:31,0 chr1 247320315 . C . PASS END=247320380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1202:0,86,255:37,0 chr1 247320381 . C . PASS END=247320381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr1 247320382 . T . PASS END=247320668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:36:0,90,1258:0,92,255:40,0 chr1 247320669 . C . PASS END=247320688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:24:0,69,1035:0,72,255:26,0 chr1 247320689 . A . PASS END=247320701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:21:0,48,720:0,55,255:19,0 chr1 247320702 . G . PASS END=247320702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:16,0 chr1 247320703 . T . PASS END=247320704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr1 247320705 . C . PASS END=247320705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr1 247322308 . C . PASS END=247322335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,208,255:40,0 chr1 247322336 . G . PASS END=247322368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,173,255:40,0 chr1 247322989 . C . PASS END=247322997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr1 247322998 . C . PASS END=247322998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 247322999 . C . PASS END=247322999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 247323000 . A . PASS END=247323000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 247323001 . G . PASS END=247323004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 247323005 . C . PASS END=247323005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr1 247323006 . C . PASS END=247323038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr1 247323039 . T . PASS END=247323048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:12:0,22,394:0,22,255:9,0 chr1 247323049 . A . PASS END=247323054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr1 247323055 . C . PASS END=247323056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 247323057 . A . PASS END=247323073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 247323074 . C . PASS END=247323114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 247323115 . T . PASS END=247323115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 247335150 . C . LowDepth;LowGQ END=247335179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 247335660 . C . PASS END=247335665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr1 247419374 . A . PASS END=247419471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:80:43:0,80,1490:0,80,255:40,0 chr1 247419472 . T . PASS END=247419508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,147,255:40,0 chr1 247419509 . T C, 256.74 PASS DP=70;MQ=249.90;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,35,0:0,35,0:207:295,210,0,2624,210,2624:255,210,0:0,0:2.5674e+02,2.0674e+02,0.0000e+00,4.5000e+02,2.4151e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,36:0,0,37,33 chr1 247419510 . A . PASS END=247419546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,179,255:40,0 chr1 247419547 . A . PASS END=247419626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,147,255:40,0 chr1 247419627 . G . PASS END=247419663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,155,255:40,0 chr1 247419664 . C T, 212.52 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,25,0:0,30,0:163:250,166,0,2098,166,2098:255,165,0:0,0:2.1252e+02,1.6252e+02,0.0000e+00,4.5000e+02,1.9729e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,33:0,0,30,25 chr1 247419665 . C . PASS END=247419701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:49:0,109,1776:0,109,255:40,0 chr1 247419702 . A . PASS END=247420171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:39:0,95,1374:0,95,255:40,0 chr1 247420172 . G . PASS END=247420172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1429:0,74,255:40,0 chr1 247420173 . C . PASS END=247420447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:43:0,90,1469:0,90,255:40,0 chr1 247463821 . T . PASS END=247463825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr1 247463826 . A . PASS END=247463826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 247463827 . G . PASS END=247463865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,623:0,48,255:19,0 chr1 247463866 . G . PASS END=247463872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 247463873 . T . PASS END=247463884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,729:0,57,255:19,0 chr1 247463885 . T . PASS END=247463885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr1 247463886 . C . PASS END=247463886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 247463887 . A . PASS END=247463889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr1 247463890 . G . PASS END=247463890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 247463891 . T . PASS END=247463891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr1 247463892 . T . PASS END=247463893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 247463894 . T . PASS END=247463894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 247463895 . G . PASS END=247463933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr1 247463934 . G . PASS END=247463934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 247463935 . G . PASS END=247464022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,734:0,66,255:24,0 chr1 247464023 . C . PASS END=247464023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 247464024 . T . PASS END=247464041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr1 247464042 . T . PASS END=247464044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 247464045 . C . PASS END=247464045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr1 247464046 . C . PASS END=247464052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 247464053 . T . PASS END=247464061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr1 247464062 . C . PASS END=247464109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:23,0 chr1 247464110 . T . PASS END=247464110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr1 247464111 . G . PASS END=247464130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:23,0 chr1 247464131 . T . PASS END=247464131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr1 247464132 . G . PASS END=247464150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr1 247464151 . C . PASS END=247464151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 247464152 . A . PASS END=247464160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 247464161 . T . PASS END=247464161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr1 247464162 . T . PASS END=247464187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,693:0,63,255:21,0 chr1 247464188 . C . PASS END=247464200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:19,0 chr1 247464201 . G . PASS END=247464201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr1 247464202 . C . PASS END=247464283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,598:0,40,255:19,0 chr1 247464284 . G . PASS END=247464284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:15,0 chr1 247464285 . G . PASS END=247464361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,475:0,45,255:18,0 chr1 247464362 . C . PASS END=247464363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,582:0,34,255:13,0 chr1 247464364 . C . PASS END=247464372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr1 247464373 . C . PASS END=247464375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 247464376 . C . PASS END=247464376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr1 247464377 . T . PASS END=247464405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,421:0,36,255:13,0 chr1 247464406 . G . PASS END=247464406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr1 247464407 . G . PASS END=247464409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr1 247464410 . C . PASS END=247464412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 247464413 . C . PASS END=247464413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr1 247464414 . T . PASS END=247464433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 247464434 . C . PASS END=247464438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr1 247464439 . C . PASS END=247464439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 247464440 . T . PASS END=247464464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr1 247464465 . C . PASS END=247464473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,869:0,63,255:23,0 chr1 247464474 . A . PASS END=247464474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr1 247464475 . G . PASS END=247464478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,917:0,78,255:26,0 chr1 247464479 . G . PASS END=247464504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:32,0 chr1 247464505 . A . PASS END=247464505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr1 247464506 . G . PASS END=247464506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 247464507 . A . PASS END=247464507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:27,0 chr1 247464508 . G . PASS END=247464525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr1 247464526 . G . PASS END=247464526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr1 247464527 . A . PASS END=247464530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr1 247464531 . T . PASS END=247464531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr1 247464532 . C . PASS END=247464534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr1 247464535 . T . PASS END=247464536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,999:0,73,255:28,0 chr1 247464537 . C . PASS END=247464546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 247464547 . G . PASS END=247464551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr1 247464552 . T . PASS END=247464555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 247464556 . T . PASS END=247464556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr1 247464557 . A . PASS END=247464558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 247464559 . A . PASS END=247464559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:26,0 chr1 247464560 . G . PASS END=247464560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 247464561 . A . PASS END=247464577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:26:0,65,881:0,65,255:26,0 chr1 247464578 . G . PASS END=247464578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr1 247464668 . T . PASS END=247464694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1064:0,90,255:30,0 chr1 247464695 . C . PASS END=247464700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr1 247464701 . G . PASS END=247464701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 247464702 . A . PASS END=247464731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr1 247464732 . C . PASS END=247464732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 247464733 . C . PASS END=247464733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 247464734 . A . PASS END=247464744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:16,0 chr1 247465961 . T . PASS END=247466033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:38:0,95,1435:0,95,255:40,0 chr1 247466034 . T . PASS END=247466034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:35,0 chr1 247466035 . C . PASS END=247466037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr1 247467328 . T . PASS END=247467359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1186:0,83,255:35,0 chr1 247468563 . C . PASS END=247468571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:96:0,120,1800:0,211,255:40,2 chr1 247468572 . G A, 48.68 PASS DP=96;MQ=248.78;MQRankSum=8.372;ReadPosRankSum=5.521;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:54,42,0:0.438,0.000:96:26,21,0:28,21,0:47:83,0,50,1503,1912,3415:255,0,255:40,0:4.8677e+01,8.0765e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,26,25,17:34,20,28,14 chr1 247468573 . T . PASS END=247468573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:97:0,120,1800:0,255,255:40,0 chr1 247471175 . T . PASS END=247471329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,154,255:40,0 chr1 247471777 . C . PASS END=247471890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:36:0,91,1179:0,91,255:40,0 chr1 247472741 . A . PASS END=247472833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,113,1800:0,113,255:40,0 chr1 247473001 . C . PASS END=247473016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 247473017 . G . PASS END=247473030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,975:0,84,255:30,0 chr1 247473031 . C . PASS END=247473031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 247473032 . C . PASS END=247473037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr1 247473038 . A . PASS END=247473038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:29,0 chr1 247473039 . T . PASS END=247473080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1089:0,83,255:33,0 chr1 247473081 . G . PASS END=247473081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:29,0 chr1 247473082 . A . PASS END=247473097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr1 247473098 . A . PASS END=247473108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,77,255:25,0 chr1 247473381 . A . PASS END=247473387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,120,1800:0,224,255:40,0 chr1 247473626 . T . PASS END=247473630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr1 247473631 . G . PASS END=247473632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1274:0,72,255:35,0 chr1 247473633 . C . PASS END=247473758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:40:0,82,1410:0,82,255:40,0 chr1 247486000 . C . PASS END=247486107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,120,1800:0,132,255:40,0 chr1 247486456 . C . PASS END=247486458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr1 247486459 . G . PASS END=247486532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,105,1570:0,110,255:40,0 chr1 247491985 . C . PASS END=247492112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1124:0,80,255:40,0 chr1 247492113 . T . PASS END=247492126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:30:0,72,1080:0,90,255:26,0 chr1 247492127 . G . PASS END=247492133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr1 247492134 . T . PASS END=247492134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:27,0 chr1 247492135 . C . PASS END=247492141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 247492142 . C . PASS END=247492168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr1 247492491 . C . PASS END=247492667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1241:0,89,255:40,0 chr1 247492668 . C . PASS END=247492668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:29,0 chr1 247492669 . A . PASS END=247492672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 247492673 . A . PASS END=247492681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:23,0 chr1 247492682 . A . PASS END=247492697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,56,255:21,0 chr1 247492698 . C . PASS END=247492751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 247492752 . A . PASS END=247492752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 247492753 . C . PASS END=247492805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,894:0,62,255:25,0 chr1 247492806 . A . PASS END=247492806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:20,0 chr1 247492807 . G . PASS END=247492823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr1 247492824 . C . PASS END=247492844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:20:0,49,731:0,49,255:19,0 chr1 247492845 . C . PASS END=247492846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 247492847 . G . PASS END=247492853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:18,0 chr1 247492854 . G . PASS END=247492858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr1 247492859 . G . PASS END=247492859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 247492860 . G . PASS END=247492861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr1 247492862 . G . PASS END=247492867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr1 247492868 . G . PASS END=247492880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1188:0,87,255:33,0 chr1 247492882 . A . PASS END=247492993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:95:33:0,95,1205:0,95,255:40,0 chr1 247492994 . C . PASS END=247493030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:89:38:0,89,1530:0,89,255:40,0 chr1 247493031 . C G, 48.98 PASS DP=38;MQ=250.00;MQRankSum=5.226;ReadPosRankSum=1.468;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,17,0:0.447,0.000:38:8,12,0:13,5,0:48:84,0,50,571,747,1318:255,0,255:20,0:4.8984e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,3,14:11,10,8,9 chr1 247493032 . C . PASS END=247493040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:32,0 chr1 247494017 . G . PASS END=247494034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr1 247494035 . C . PASS END=247494061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr1 247494062 . C . PASS END=247494068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr1 247494069 . G . PASS END=247494085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:18,0 chr1 247494086 . A . PASS END=247494088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 247494089 . T . PASS END=247494090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr1 247494091 . A . PASS END=247494091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr1 247494092 . C . PASS END=247494094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr1 247494095 . G . PASS END=247494095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:17,0 chr1 247494096 . G . PASS END=247494100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 247494101 . A . PASS END=247494101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr1 247494102 . A . PASS END=247494107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:21,0 chr1 247494108 . A . PASS END=247494108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 247494109 . C . PASS END=247494113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr1 247494114 . G . PASS END=247494122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr1 247494123 . C A, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=1.725;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:4,7,0:7,3,0:48:85,0,50,349,389,739:255,0,255:10,0:4.9897e+01,6.6269e-05,5.3000e+01,3.4942e+02,4.2396e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,4,6:2,9,5,5 chr1 247494124 . C . PASS END=247494141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 247494219 . T . PASS END=247494234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:11,0 chr1 247494235 . A . PASS END=247494241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr1 247494242 . A . PASS END=247494242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:8,0 chr1 247494243 . T . PASS END=247494245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr1 247494246 . G . PASS END=247494246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr1 247494247 . G . PASS END=247494249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 247494250 . C . PASS END=247494250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr1 247494251 . G . PASS END=247494260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,282:0,27,255:9,0 chr1 247494261 . C . PASS END=247494261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:7,0 chr1 247494262 . G . PASS END=247494262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 247494263 . G . PASS END=247494263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 247494264 . G . PASS END=247494264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 247494265 . C . PASS END=247494265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 247494266 . T . PASS END=247494268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 247494269 . A . PASS END=247494269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 247494270 . C . PASS END=247494287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr1 247494288 . A . PASS END=247494288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 247494289 . C . PASS END=247494299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr1 247494300 . C . PASS END=247494312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 247494313 . T . PASS END=247494318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 247494319 . A . PASS END=247494320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 247494321 . C . PASS END=247494321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 247494322 . T . PASS END=247494322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr1 247494323 . G . PASS END=247494326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 247494327 . C . PASS END=247494327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 247494328 . C . PASS END=247494333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 247494334 . T . PASS END=247494334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 247494335 . G . PASS END=247494342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr1 247494343 . C . PASS END=247494343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247494344 . C . PASS END=247494344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 247494345 . C . PASS END=247494345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247494346 . G . PASS END=247494347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247494348 . C . PASS END=247494349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 247494350 . T G, 50.00 PASS DP=11;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=1.932;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,6,0:0.545,0.000:11:3,4,0:2,2,0:48:85,0,50,215,150,365:177,0,139:5,0:5.0000e+01,6.6786e-05,5.2717e+01,2.1455e+02,1.8483e+02,3.6761e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,2,4:2,3,2,4 chr1 247494351 . G . PASS END=247494352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 247494353 . T . PASS END=247494353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr1 247494354 . C . PASS END=247494357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr1 247494358 . G . PASS END=247494358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr1 247494359 . G . PASS END=247494360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 247494361 . C . PASS END=247494371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:10,0 chr1 247494372 . C . PASS END=247494372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247494373 . C . PASS END=247494378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 247494379 . C . PASS END=247494388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr1 247494389 . G . PASS END=247494404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:6:0,12,180:0,18,210:6,0 chr1 247494405 . A . PASS END=247494405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr1 247494406 . G . PASS END=247494407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr1 247494408 . C T, 62.31 PASS DP=5;MQ=240.34;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:100,15,0,194,15,194:194,15,0:0,0:6.2312e+01,1.2312e+01,2.6294e-01,1.9117e+02,4.7082e+01,1.9417e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,3:0,0,3,2 chr1 247494409 . C . PASS END=247494409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr1 247494410 . C . PASS END=247494413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,178:3,0 chr1 247494414 . C . PASS END=247494427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr1 247494428 . C . LowGQ END=247494428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 247494429 . G . PASS END=247494445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr1 247494446 . C . PASS END=247494448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,178:0,15,178:5,0 chr1 247494449 . G . LowGQ END=247494449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 247494450 . G . PASS END=247494473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 247495077 . C . PASS END=247495078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr1 247495079 . G . PASS END=247495117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 247495118 . C . LowGQ END=247495118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,70:5,0,74:3,0 chr1 247495119 . G . PASS END=247495128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,127:0,12,127:6,0 chr1 247495129 . T . PASS END=247495129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:5,0 chr1 247495130 . G . PASS END=247495133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 247495134 . G . LowGQ END=247495134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,114:15,0,129:4,0 chr1 247495135 . C . PASS END=247495136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 247495137 . G . LowGQ END=247495137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,100:15,0,115:4,0 chr1 247495138 . C . PASS END=247495138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 247495139 . G . LowGQ END=247495139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:13,0,146:5,0 chr1 247495140 . G . PASS END=247495146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 247495147 . G . LowGQ END=247495147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,100:15,0,115:4,0 chr1 247495148 . C . PASS END=247495149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr1 247495150 . G . LowGQ END=247495150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,3:6:0:6:0,0,67:32,0,99:3,0 chr1 247495151 . G . PASS END=247495153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,166:0,18,166:6,0 chr1 247495154 . G . LowGQ END=247495154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,114:15,0,129:4,0 chr1 247495155 . C . PASS END=247495156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 247495157 . G . PASS END=247495157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr1 247495158 . A . PASS END=247495158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr1 247495159 . G . LowGQ END=247495160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,100:0,0,115:5,0 chr1 247495161 . A . PASS END=247495163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr1 247495164 . G . LowGQ END=247495165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,177:0,0,187:7,0 chr1 247495166 . A . PASS END=247495168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr1 247495169 . G . LowGQ END=247495169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,247:3,0,250:8,0 chr1 247495170 . G . PASS END=247495172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247495173 . G . PASS END=247495174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr1 247495175 . A . PASS END=247495179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr1 247495180 . T . LowGQ END=247495180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,266:1,0,255:8,0 chr1 247495181 . C . PASS END=247495182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247495183 . G . LowGQ END=247495183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:25,0,255:8,0 chr1 247495184 . G . PASS END=247495184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr1 247495185 . C . PASS END=247495188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 247495189 . C . PASS END=247495189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 247495190 . T . LowGQ END=247495190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr1 247495191 . C . PASS END=247495195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247495196 . G . PASS END=247495197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr1 247495198 . G . PASS END=247495202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr1 247495203 . T . PASS END=247495203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr1 247495204 . T . PASS END=247495205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr1 247495206 . C . PASS END=247495206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr1 247495207 . T . PASS END=247495213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr1 247495214 . C . PASS END=247495220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 247495221 . A . PASS END=247495244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr1 247495245 . T . PASS END=247495245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr1 247495246 . G . PASS END=247495295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr1 247495296 . A . PASS END=247495305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,227:6,0 chr1 247495306 . C . PASS END=247495314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,210:3,0 chr1 247495315 . C . PASS END=247495347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr1 247495348 . G . PASS END=247495384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 247495385 . T C, 50.01 PASS DP=5;MQ=250.00;MQRankSum=0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,4,0:0.800,0.000:5:1,2,0:0,2,0:27:85,0,24,143,36,179:140,0,24:1,0:5.0009e+01,9.2579e-03,2.6738e+01,1.4309e+02,7.0547e+01,1.8186e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,3,1:0,1,3,1 chr1 247495386 . T . PASS END=247495419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr1 247495420 . G . LowGQ END=247495420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr1 247495421 . G . PASS END=247495422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 247495423 . G . PASS END=247495455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,139:0,12,139:5,0 chr1 247495456 . C . PASS END=247495468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr1 247495469 . G . PASS END=247495473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr1 247495474 . G . PASS END=247495478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 247495479 . C . LowGQ END=247495479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,294:9,0,255:6,0 chr1 247495480 . G . PASS END=247495518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,282:0,24,255:9,0 chr1 247495519 . A . PASS END=247495521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 247495522 . T . PASS END=247495522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 247495523 . G . PASS END=247495537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr1 247495538 . G . PASS END=247495540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 247495541 . T . PASS END=247495541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 247495542 . G . PASS END=247495543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 247495544 . A . LowGQ END=247495544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,418:32,0,255:12,0 chr1 247495545 . G . PASS END=247495545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 247495546 . C . PASS END=247495546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr1 247495547 . G . PASS END=247495549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 247495550 . G . PASS END=247495550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr1 247495551 . A . PASS END=247495555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,446:0,45,255:15,0 chr1 247495556 . A . PASS END=247495576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,495:0,32,255:11,0 chr1 247495577 . G . PASS END=247495581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:21:16:0,21,315:0,48,255:9,0 chr1 247495582 . A . PASS END=247495590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:12:17:0,12,180:0,34,255:6,0 chr1 247495591 . T . LowGQ END=247495599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:15,1:16:0:16:0,0,0:0,31,255:1,0 chr1 247495600 . AC A, 69.90 PASS DP=16;MQ=250.00;MQRankSum=1.488;ReadPosRankSum=-1.240;FractionInformativeReads=0.875;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,13,0:0.929,0.000:14:0,7,0:1,6,0:20:88,23,0,163,37,176:255,0,107:0,18:6.9900e+01,1.9900e+01,4.4668e-02,1.7937e+02,6.8565e+01,1.9628e+02:0.00,15.00,18.00,34.77,49.77,37.77:0,1,8,5:1,0,4,9 chr1 247495601 . C . LowGQ END=247495602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,19:22:0:15:0,0,0:255,0,42:12,18 chr1 247495603 . C . PASS END=247495614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 247495615 . C . PASS END=247495615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:11,0 chr1 247495616 . C . PASS END=247495626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr1 247495627 . C . PASS END=247495627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr1 247495628 . G . PASS END=247495646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:12,0 chr1 247495647 . G . PASS END=247495657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr1 247495658 . A . LowGQ END=247495658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:7,0 chr1 247495659 . C . PASS END=247495665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 247495666 . G . PASS END=247495666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr1 247537309 . G . PASS END=247537334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1398:0,101,255:39,0 chr1 247581393 . C . PASS END=247581393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 247581417 . C . PASS END=247581418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1321:0,108,255:36,0 chr1 247581474 . C . PASS END=247581474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 247581981 . T . PASS END=247581981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 247582029 . G . PASS END=247582029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr1 247582031 . G . PASS END=247582031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:33,0 chr1 247582035 . C . PASS END=247582035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr1 247582097 . A . PASS END=247582100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 247582101 . A . PASS END=247582130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:27:0,67,946:0,67,255:26,0 chr1 247582131 . G . PASS END=247582132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 247582133 . T . PASS END=247582134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 247582135 . C . PASS END=247582138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 247582139 . G . PASS END=247582139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr1 247582140 . A . PASS END=247582148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 247582149 . A . PASS END=247582149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr1 247582150 . G . PASS END=247582153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 247582154 . G . PASS END=247582154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr1 247582155 . T . PASS END=247582165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr1 247582166 . A . PASS END=247582166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,876:0,51,255:25,0 chr1 247582167 . A . PASS END=247582167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr1 247582168 . A . PASS END=247582174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247582175 . A . PASS END=247582176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:26,0 chr1 247582177 . G . PASS END=247582177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247582178 . C . PASS END=247582178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:25,0 chr1 247582179 . A . PASS END=247582181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 247582182 . T . PASS END=247582182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:28,0 chr1 247582183 . A . PASS END=247582193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 247582194 . C . PASS END=247582195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr1 247582196 . C . PASS END=247582198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 247582199 . C . PASS END=247582201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 247582202 . A . PASS END=247582202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,959:0,18,255:20,0 chr1 247582203 . A . PASS END=247582204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr1 247582205 . G . PASS END=247582208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 247582209 . G . PASS END=247582218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 247582219 . C . PASS END=247582329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,83,255:36,0 chr1 247582330 . C . PASS END=247582349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr1 247582350 . A . PASS END=247582350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr1 247582351 . G . PASS END=247582358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr1 247582359 . A . PASS END=247582362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 247582363 . A . PASS END=247582364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 247582365 . A . PASS END=247582379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:16,0 chr1 247586532 . G . PASS END=247586590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:51:0,87,1760:0,87,255:40,0 chr1 247586591 . G . PASS END=247586627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:39:0,82,1332:0,82,255:40,0 chr1 247586628 . T . LowGQ END=247586628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:0:41:0,0,857:14,0,255:31,0 chr1 247586629 . C . PASS END=247586629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1310:0,106,255:36,0 chr1 247586630 . T . PASS END=247586630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1206:0,67,255:35,0 chr1 247586631 . C . PASS END=247586632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:89:41:0,89,1180:0,89,255:35,0 chr1 247586633 . A . PASS END=247586633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1153:0,73,255:34,0 chr1 247586634 . T . PASS END=247586641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:89:40:0,89,1172:0,89,255:40,0 chr1 247586642 . A . PASS END=247586642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1166:0,56,255:35,0 chr1 247586643 . T . PASS END=247586643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1427:0,107,255:38,0 chr1 247586644 . G . PASS END=247586644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:72:41:0,72,1140:0,72,255:36,0 chr1 247586645 . A . PASS END=247586646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 247586647 . G . PASS END=247586647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:42:42:0,42,941:0,42,255:35,0 chr1 247586648 . A . PASS END=247586649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 247586650 . A . PASS END=247586650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:75:42:0,75,1095:0,75,255:37,0 chr1 247586651 . G . PASS END=247586651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr1 247586656 . G . PASS END=247586656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr1 247587149 . A . PASS END=247587151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr1 247587152 . A . PASS END=247587158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247587159 . G . PASS END=247587159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 247587160 . A . PASS END=247587165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 247587166 . A . PASS END=247587166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr1 247587167 . G . PASS END=247587167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 247587168 . A . PASS END=247587168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr1 247587169 . A . PASS END=247587179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr1 247587180 . A . PASS END=247587180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:30,0 chr1 247587181 . A . PASS END=247587182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr1 247587183 . C . PASS END=247587183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr1 247587184 . A . PASS END=247587185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 247587186 . A . PASS END=247587186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr1 247587187 . T . PASS END=247587187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr1 247587188 . T . PASS END=247587188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr1 247587189 . C . PASS END=247587195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1105:0,80,255:32,0 chr1 247587196 . A . PASS END=247587196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr1 247587197 . T . PASS END=247587204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1180:0,86,255:33,0 chr1 247587205 . A . PASS END=247587205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr1 247587206 . G . PASS END=247587213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1213:0,88,255:34,0 chr1 247587214 . C . PASS END=247587214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1067:0,39,255:30,0 chr1 247587215 . G . PASS END=247587216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 247587217 . C . PASS END=247587217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:31,0 chr1 247587218 . T . PASS END=247587241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,94,255:36,0 chr1 247587242 . A . PASS END=247587242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr1 247587243 . A . PASS END=247587244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,107,255:27,0 chr1 247587245 . G . PASS END=247587247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,91,255:24,0 chr1 247587248 . A . PASS END=247587250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:28,0 chr1 247587251 . C . PASS END=247587258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:29:0,72,1080:0,87,255:26,0 chr1 247587259 . C . PASS END=247587301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1050:0,84,255:30,0 chr1 247587302 . A . PASS END=247587302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 247587303 . G . PASS END=247587313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 247587314 . T . PASS END=247587336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:25,0 chr1 247587337 . A . PASS END=247587337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr1 247587338 . G . PASS END=247587355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 247587356 . A . PASS END=247587386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,668:0,46,255:19,0 chr1 247587387 . G . PASS END=247587389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,40,255:13,0 chr1 247587390 . T . PASS END=247587399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:19,0 chr1 247587400 . G . PASS END=247587404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 247587405 . C . PASS END=247587415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,50,255:18,0 chr1 247587416 . T . PASS END=247587416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr1 247587417 . C . PASS END=247587439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:17,0 chr1 247587440 . A . PASS END=247587454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:18,0 chr1 247587455 . G . PASS END=247587455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr1 247587456 . G . PASS END=247587456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 247587457 . A . PASS END=247587457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,580:0,37,255:16,0 chr1 247587458 . A . PASS END=247587463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr1 247587464 . T . PASS END=247587464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,535:0,24,255:13,0 chr1 247587465 . G . PASS END=247587476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:15,0 chr1 247587477 . G A, 92.14 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,7,0:0,8,0:42:130,45,0,566,45,566:255,45,0:0,0:9.2140e+01,4.2140e+01,2.6534e-04,4.5000e+02,7.6910e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,9:0,0,6,9 chr1 247587478 . T . PASS END=247587484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 247587485 . C . PASS END=247587509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr1 247587510 . T . PASS END=247587510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 247587511 . C . PASS END=247587512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 247587513 . G . PASS END=247587516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 247587517 . T . PASS END=247587517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr1 247587518 . A . PASS END=247587530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr1 247587531 . A G, 100.71 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,6,0:0,12,0:51:138,54,0,669,54,669:255,54,0:0,0:1.0071e+02,5.0713e+01,3.6758e-05,4.5000e+02,8.5483e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,8:0,0,4,14 chr1 247587532 . G . PASS END=247587556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr1 247587557 . G . PASS END=247587568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr1 247587569 . T . PASS END=247587590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,666:0,44,255:18,0 chr1 247587591 . C . PASS END=247587599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr1 247587600 . A . PASS END=247587600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,652:0,46,255:20,0 chr1 247587601 . C . PASS END=247587612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,752:0,63,255:24,0 chr1 247587613 . A . PASS END=247587613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:23,0 chr1 247587614 . T . PASS END=247587618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,809:0,72,255:25,0 chr1 247587619 . A . PASS END=247587619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:23,0 chr1 247587620 . G . PASS END=247587635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:26,0 chr1 247587636 . C . PASS END=247587636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,754:0,45,255:24,0 chr1 247587637 . C . PASS END=247587654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,903:0,62,255:26,0 chr1 247587655 . T . PASS END=247587655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,817:0,44,255:22,0 chr1 247587656 . T . PASS END=247587656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 247587657 . C . PASS END=247587657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr1 247587658 . G . PASS END=247587675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr1 247587676 . T . PASS END=247587676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:22,0 chr1 247587677 . T . PASS END=247587691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,862:0,68,255:25,0 chr1 247587692 . G . PASS END=247587695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:25:0,57,855:0,75,255:19,0 chr1 247587696 . G . PASS END=247587703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:25,0 chr1 247587704 . C . PASS END=247587704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:24,0 chr1 247587705 . T . PASS END=247587705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 247587706 . G . PASS END=247587709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:24,0 chr1 247587710 . G . PASS END=247587710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr1 247587711 . G . PASS END=247587711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr1 247587712 . C . PASS END=247587716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,823:0,36,255:24,0 chr1 247587717 . G . PASS END=247587717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr1 247587718 . G . PASS END=247587718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:24,0 chr1 247587719 . C . PASS END=247587719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr1 247587720 . C . PASS END=247587721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr1 247587722 . A . PASS END=247587723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr1 247587724 . C . PASS END=247587731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,787:0,36,255:24,0 chr1 247587732 . C . PASS END=247587733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr1 247587734 . T . PASS END=247587740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,886:0,42,255:24,0 chr1 247587741 . G . PASS END=247587742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr1 247587743 . G . PASS END=247587744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:24,0 chr1 247587745 . A . PASS END=247587749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:24,0 chr1 247587750 . C . PASS END=247587775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr1 247587776 . C . PASS END=247587776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,870:0,42,255:25,0 chr1 247587777 . C . PASS END=247587782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr1 247587783 . G . PASS END=247587784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247587785 . T . PASS END=247587785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr1 247587786 . C . PASS END=247587797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr1 247587798 . A . PASS END=247587830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,902:0,64,255:26,0 chr1 247587831 . G . PASS END=247587833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 247587834 . C . PASS END=247587844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:25,0 chr1 247587845 . A . PASS END=247587845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:24,0 chr1 247587846 . T . PASS END=247587857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,955:0,78,255:26,0 chr1 247587858 . G . PASS END=247587866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,897:0,81,255:28,0 chr1 247587867 . C . PASS END=247587870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 247587871 . G . PASS END=247587872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 247587873 . C . PASS END=247587878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 247587879 . G . PASS END=247587903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr1 247587904 . T . PASS END=247587904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr1 247587905 . C . PASS END=247587914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1163:0,90,255:31,0 chr1 247587915 . C . PASS END=247587917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 247587918 . A . PASS END=247587950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1005:0,83,255:30,0 chr1 247587951 . C . PASS END=247587951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 247587952 . G . PASS END=247587974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr1 247587975 . C . PASS END=247587975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr1 247587976 . A . PASS END=247588005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1216:0,83,255:31,0 chr1 247588006 . G . PASS END=247588006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:27,0 chr1 247588007 . G . PASS END=247588015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr1 247588016 . A . PASS END=247588024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr1 247588025 . A . PASS END=247588025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr1 247588026 . G . PASS END=247588026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 247588027 . A . PASS END=247588027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr1 247588028 . G . PASS END=247588035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 247588036 . A . PASS END=247588036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:27,0 chr1 247588037 . G . PASS END=247588037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 247588038 . C . PASS END=247588038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr1 247588039 . C . PASS END=247588043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 247588044 . C . PASS END=247588048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr1 247588049 . C . PASS END=247588049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 247588050 . A . PASS END=247588052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 247588053 . C T, 136.83 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,21,0:0,9,0:87:175,90,0,1133,90,1133:255,90,0:0,0:1.3683e+02,8.6832e+01,0.0000e+00,4.5000e+02,1.2160e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,13:0,0,14,16 chr1 247588054 . A . PASS END=247588079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,953:0,62,255:26,0 chr1 247588080 . C . PASS END=247588080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 247588081 . T . PASS END=247588087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 247588088 . C . PASS END=247588088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:22,0 chr1 247588089 . C . PASS END=247588090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 247588091 . G . PASS END=247588091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr1 247588092 . T . PASS END=247588092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr1 247588093 . T . PASS END=247588107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,862:0,72,255:24,0 chr1 247588108 . G . PASS END=247588108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 247588109 . G . PASS END=247588128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 247588129 . C . PASS END=247588129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247588130 . T . PASS END=247588133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,978:0,67,255:26,0 chr1 247588134 . C . PASS END=247588136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 247588137 . C . PASS END=247588139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:31:0,69,1035:0,77,255:26,0 chr1 247588140 . C . PASS END=247588140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,88,255:26,0 chr1 247588141 . C . PASS END=247588141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:25,0 chr1 247588142 . T . PASS END=247588143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,85,255:28,0 chr1 247588144 . T . PASS END=247588144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:26,0 chr1 247588145 . G . PASS END=247588179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:31,0 chr1 247588180 . A . PASS END=247588180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr1 247588181 . A . PASS END=247588185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:33,0 chr1 247588186 . A . PASS END=247588186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:33,0 chr1 247588187 . A . PASS END=247588397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:34:0,86,1119:0,86,255:40,0 chr1 247588398 . G . PASS END=247588398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1082:0,50,255:31,0 chr1 247588399 . A . PASS END=247588400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr1 247588401 . G . PASS END=247588401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:17:38:0,17,996:0,17,255:29,0 chr1 247588402 . C . PASS END=247588402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1210:0,81,255:32,0 chr1 247588403 . T . PASS END=247588403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1134:0,78,255:31,0 chr1 247588404 . T . PASS END=247588404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1272:0,94,255:31,0 chr1 247588405 . C . PASS END=247588405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:11:37:0,11,893:0,11,255:27,0 chr1 247588406 . C . PASS END=247588406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:31,0 chr1 247588407 . C . PASS END=247588408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1440:0,111,255:34,0 chr1 247588409 . G . PASS END=247588409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1077:0,67,255:31,0 chr1 247588410 . C . PASS END=247588411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,100,1277:0,100,255:34,0 chr1 247588412 . G . PASS END=247588412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:33:38:0,33,1111:0,33,255:29,0 chr1 247588413 . A . PASS END=247588416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:37:0,94,1224:0,94,255:34,0 chr1 247588417 . G . PASS END=247588417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1197:0,67,255:30,0 chr1 247588418 . T . PASS END=247588422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1260:0,83,255:32,0 chr1 247588423 . G . PASS END=247588423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:44:38:0,44,1146:0,44,255:31,0 chr1 247588424 . T . PASS END=247588426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:32,0 chr1 247588427 . T . PASS END=247588427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1066:0,71,255:31,0 chr1 247588428 . T . PASS END=247588430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1093:0,88,255:32,0 chr1 247588431 . G . PASS END=247588431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,987:0,55,255:31,0 chr1 247588432 . G . PASS END=247588437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr1 247588438 . T . PASS END=247588438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1082:0,71,255:31,0 chr1 247588439 . A . PASS END=247588446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1164:0,85,255:33,0 chr1 247588447 . T . PASS END=247588447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:32,0 chr1 247588448 . T . PASS END=247588453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1184:0,86,255:35,0 chr1 247588454 . A . PASS END=247588454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1095:0,72,255:33,0 chr1 247588455 . G . PASS END=247588458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1191:0,91,255:37,0 chr1 247588459 . T . PASS END=247588459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1073:0,61,255:34,0 chr1 247588460 . A . PASS END=247588466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,100,1293:0,100,255:39,0 chr1 247588467 . T . PASS END=247588467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:38,0 chr1 247588468 . T . PASS END=247588481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1156:0,90,255:40,0 chr1 247588482 . C . PASS END=247588482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1302:0,48,255:35,0 chr1 247588483 . C . PASS END=247588501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1296:0,84,255:38,0 chr1 247588502 . A . PASS END=247588502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:53:41:0,53,1329:0,53,255:33,0 chr1 247588503 . G . PASS END=247588512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:34:0,87,1305:0,87,255:34,0 chr1 247588513 . T . PASS END=247588513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:28,0 chr1 247588514 . C . PASS END=247588519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:29,0 chr1 247588520 . T . PASS END=247588520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:28,0 chr1 247588521 . G . PASS END=247588522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr1 247588523 . A . PASS END=247588523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr1 247588524 . G . PASS END=247588524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 247588525 . A . PASS END=247588525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,941:0,57,255:26,0 chr1 247588526 . A . PASS END=247588527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 247588528 . A . PASS END=247588529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr1 247588530 . A . PASS END=247588536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr1 247588537 . T . PASS END=247588537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr1 247588538 . G . PASS END=247588541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 247588542 . G . PASS END=247588544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,79,255:25,0 chr1 247588545 . C . PASS END=247588549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr1 247588550 . A . PASS END=247588553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 247588554 . A . PASS END=247588555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 247588556 . T . PASS END=247588566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,79,255:26,0 chr1 247588567 . C . PASS END=247588905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:28:0,80,1133:0,80,255:40,0 chr1 247592887 . A . PASS END=247592904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr1 247592905 . C . PASS END=247593031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,920:0,81,255:36,0 chr1 247593032 . C . PASS END=247593057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr1 247597405 . G . PASS END=247597423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:26,0 chr1 247597424 . T . PASS END=247597439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr1 247597440 . T . PASS END=247597440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:28,0 chr1 247597441 . C . PASS END=247597498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1080:0,87,255:36,0 chr1 247597499 . A . PASS END=247597499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:32,0 chr1 247597500 . A . PASS END=247597512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1340:0,92,255:35,0 chr1 247597513 . C . PASS END=247597513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr1 247597514 . T . PASS END=247597547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1202:0,83,255:33,0 chr1 247597548 . A . PASS END=247597562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:25,0 chr1 247597563 . T . PASS END=247597575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:47:21:0,47,737:0,47,255:19,0 chr1 247599264 . T . PASS END=247599264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr1 247599272 . G . PASS END=247599419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1180:0,86,255:40,0 chr1 247599420 . C . PASS END=247599424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,63,255:23,0 chr1 247599425 . T . PASS END=247599442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,693:0,44,255:19,0 chr1 247607274 . G . PASS END=247607408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,1000:0,81,255:40,0 chr1 247607409 . A . PASS END=247607411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1170:0,75,255:26,0 chr1 247607412 . C . PASS END=247607419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1141:0,80,255:29,0 chr1 247607420 . C . PASS END=247607423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 247607424 . C . PASS END=247607426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 247607427 . C . PASS END=247607445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,854:0,61,255:25,0 chr1 247607953 . A . PASS END=247607961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr1 247607962 . C . PASS END=247607964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247607965 . C . PASS END=247607967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 247607968 . C . PASS END=247608070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,86,255:38,0 chr1 247608071 . A . PASS END=247608104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:26,0 chr1 247608105 . G . PASS END=247608105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr1 247608106 . C . PASS END=247608106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 247608107 . C . PASS END=247608123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr1 247611707 . G . PASS END=247611806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:97:38:0,97,1343:0,97,255:40,0 chr1 247611808 . A . PASS END=247611808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr1 247611945 . T . PASS END=247611945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr1 247612126 . C . PASS END=247612126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:30:50:0,30,450:0,134,255:10,0 chr1 247612131 . T . PASS END=247612131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:12:54:0,12,180:0,145,255:4,0 chr1 247612184 . A . PASS END=247612184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 247612237 . G . PASS END=247612237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr1 247612410 . A . PASS END=247612410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr1 247614331 . T . PASS END=247614337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:31,0 chr1 247614338 . C . PASS END=247614338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 247614339 . A . PASS END=247614348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1117:0,80,255:35,0 chr1 247614349 . G . PASS END=247614385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:36:0,86,1157:0,86,255:39,0 chr1 247614386 . T C, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.224;ReadPosRankSum=2.961;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,25,0:0.625,0.000:40:7,14,0:8,11,0:46:85,0,45,865,529,1394:255,0,255:15,0:5.0000e+01,1.1519e-04,4.7818e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,14,11:8,7,13,12 chr1 247614387 . C . PASS END=247614406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,105,1496:0,107,255:40,0 chr1 247614407 . G A, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.574;ReadPosRankSum=1.898;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,26,0:0.591,0.000:44:7,14,0:11,12,0:47:85,0,47,876,625,1500:255,0,255:14,0:5.0000e+01,8.3871e-05,5.0297e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,15,11:8,10,13,13 chr1 247614408 . T . PASS END=247614415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1485:0,103,255:36,0 chr1 247614416 . T . PASS END=247614416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1182:0,45,255:32,0 chr1 247614417 . T . PASS END=247614420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,98,255:31,0 chr1 247614421 . A . PASS END=247614421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1066:0,61,255:27,0 chr1 247614422 . G . PASS END=247614423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1359:0,83,255:31,0 chr1 247614424 . G . PASS END=247614424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:31,0 chr1 247614425 . G . PASS END=247614427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,94,255:30,0 chr1 247614428 . G . PASS END=247614428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr1 247614429 . T . PASS END=247614444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1225:0,86,255:38,0 chr1 247614445 . G . PASS END=247614515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1249:0,89,255:38,0 chr1 247614516 . G . PASS END=247614552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1180:0,85,255:32,0 chr1 247614553 . C T, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.724;ReadPosRankSum=2.550;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,16,0:0.516,0.000:31:5,7,0:10,9,0:48:85,0,50,513,536,1050:255,0,255:14,0:5.0000e+01,6.5233e-05,5.2983e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,7,9:9,6,8,8 chr1 247614554 . G . PASS END=247614563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:31,0 chr1 247614564 . C . PASS END=247614564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 247614565 . C . PASS END=247614590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1211:0,86,255:37,0 chr1 247614591 . T . PASS END=247614623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1294:0,81,255:38,0 chr1 247614624 . A . PASS END=247614624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1215:0,64,255:33,0 chr1 247614625 . G . PASS END=247614632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1236:0,94,255:36,0 chr1 247614633 . T . PASS END=247614633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:33,0 chr1 247614634 . G . PASS END=247614637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr1 247614638 . G . PASS END=247614638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1103:0,58,255:30,0 chr1 247614639 . C . PASS END=247614639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr1 247614640 . C . PASS END=247614640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:33,0 chr1 247614641 . A . PASS END=247614655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1175:0,91,255:36,0 chr1 247614656 . A . PASS END=247614672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1164:0,83,255:31,0 chr1 247614673 . A . PASS END=247614692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,65,255:25,0 chr1 247614693 . C T, 121.78 PASS DP=25;MQ=249.76;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,8,0:0,17,0:72:160,75,0,940,75,940:255,78,0:0,0:1.2178e+02,7.1784e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,16:0,0,12,13 chr1 247614694 . A . PASS END=247614698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,61,255:21,0 chr1 247614699 . T . PASS END=247614704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,55,255:19,0 chr1 247614705 . C . PASS END=247614706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,64,255:20,0 chr1 247614707 . C . PASS END=247614707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr1 247614708 . A . PASS END=247614708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 247614709 . C . PASS END=247614711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr1 247614712 . C . PASS END=247614712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:17,0 chr1 247614713 . A . PASS END=247614730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 247614731 . A . PASS END=247614731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr1 247614732 . C . PASS END=247614732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr1 247614733 . C . PASS END=247614733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr1 247614734 . T . PASS END=247614752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr1 247614753 . G . PASS END=247614796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:25,0 chr1 247614797 . T . PASS END=247614797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr1 247614798 . G . PASS END=247614810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr1 247614811 . G . PASS END=247614814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr1 247614815 . A . PASS END=247614821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr1 247614822 . T . PASS END=247614822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:22,0 chr1 247614823 . G . PASS END=247614829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr1 247614830 . G . PASS END=247614830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:25,0 chr1 247614831 . C . PASS END=247614853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,892:0,61,255:26,0 chr1 247614854 . A . PASS END=247614858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr1 247614859 . A . PASS END=247614868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:30,0 chr1 247614869 . A . PASS END=247614869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1009:0,51,255:28,0 chr1 247614870 . G . PASS END=247614877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:29,0 chr1 247614878 . T . PASS END=247614879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr1 247614880 . G . PASS END=247614889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:29,0 chr1 247614890 . T . PASS END=247614891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr1 247614892 . G . PASS END=247614892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 247614893 . C . PASS END=247614894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 247614895 . G . PASS END=247614895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 247614896 . A C, 50.00 PASS DP=30;MQ=249.67;MQRankSum=3.969;ReadPosRankSum=2.434;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,16,0:0.552,0.000:29:4,7,0:9,9,0:48:85,0,49,564,449,1013:255,0,255:12,0:5.0000e+01,6.8857e-05,5.2325e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,4,7,9:4,9,8,8 chr1 247614897 . T . PASS END=247614908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 247614909 . G . PASS END=247614933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,930:0,62,255:26,0 chr1 247614934 . G . PASS END=247614948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr1 247614949 . T . PASS END=247614949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 247614950 . C . PASS END=247614968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:25,0 chr1 247614969 . C . PASS END=247614969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr1 247614970 . A . PASS END=247614981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:32,0 chr1 247614982 . G . PASS END=247614982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 247614983 . C . PASS END=247614996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1247:0,86,255:31,0 chr1 247614997 . G . PASS END=247614997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr1 247614998 . A . PASS END=247615119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1094:0,80,255:35,0 chr1 247615120 . C . PASS END=247615123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr1 247615124 . C . PASS END=247615251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1117:0,80,255:37,0 chr1 247615252 . G . PASS END=247615268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,62,255:26,0 chr1 247615269 . G . PASS END=247615271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 247615272 . T . PASS END=247615274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr1 247615275 . C . PASS END=247615284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,775:0,50,255:19,0 chr1 247654430 . A . PASS END=247654460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1095:0,83,255:40,0 chr1 247654461 . C . PASS END=247654497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,110,1543:0,110,255:40,0 chr1 247654498 . G A, 46.76 PASS DP=52;MQ=250.00;MQRankSum=6.061;ReadPosRankSum=4.476;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,21,0:0.404,0.000:52:15,10,0:16,11,0:46:82,0,50,751,1109,1860:255,0,255:31,0:4.6764e+01,1.1312e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,11,11,10:12,19,8,13 chr1 247654499 . G . PASS END=247654535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,133,255:40,0 chr1 247654536 . T . PASS END=247654877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:34:0,82,1233:0,82,255:40,0 chr1 247654878 . G . PASS END=247654878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:29,0 chr1 247654879 . C . PASS END=247654955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1117:0,80,255:33,0 chr1 247654956 . A . PASS END=247654980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1075:0,88,255:35,0 chr1 247654981 . T . PASS END=247654981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr1 247654982 . A . PASS END=247654992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1380:0,98,255:35,0 chr1 247654993 . T C, 49.03 PASS DP=36;MQ=250.00;MQRankSum=5.078;ReadPosRankSum=2.531;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,16,0:0.444,0.000:36:12,6,0:8,10,0:48:84,0,50,564,702,1267:255,0,255:19,0:4.9033e+01,7.6105e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,6,10:13,7,10,6 chr1 247654994 . T . PASS END=247655010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1276:0,108,255:37,0 chr1 247655011 . G . PASS END=247655011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1339:0,62,255:36,0 chr1 247655012 . G . PASS END=247655030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:38:0,90,1286:0,90,255:40,0 chr1 247655031 . G . PASS END=247655053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1355:0,95,255:35,0 chr1 247655054 . G . PASS END=247655054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:31,0 chr1 247655055 . G . PASS END=247655057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:33,0 chr1 247655058 . C . PASS END=247655058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:30,0 chr1 247655059 . C . PASS END=247655064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:33,0 chr1 247655065 . C . PASS END=247655086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1296:0,92,255:36,0 chr1 247655087 . C . PASS END=247655087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:32,0 chr1 247655088 . G . PASS END=247655100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,99,255:30,0 chr1 247655101 . C . PASS END=247655101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 247655102 . G A, 49.55 PASS DP=33;MQ=250.00;MQRankSum=4.863;ReadPosRankSum=1.284;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,15,0:0.455,0.000:33:9,8,0:9,7,0:47:84,0,47,184,184,184:255,0,255:14,0:4.9549e+01,9.1637e-05,5.0000e+01,1.8432e+02,2.1909e+02,1.8733e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,9,7,8:10,8,10,5 chr1 247655103 . G . PASS END=247655105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:26,0 chr1 247655106 . C . PASS END=247655107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr1 247655108 . G . PASS END=247655109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 247655110 . G . PASS END=247655139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1210:0,86,255:38,0 chr1 247655140 . C . PASS END=247655237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:40:0,108,1501:0,108,255:40,0 chr1 247655238 . C . PASS END=247655274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:37:0,81,1278:0,81,255:40,0 chr1 247655275 . T C, 49.12 PASS DP=36;MQ=250.00;MQRankSum=5.078;ReadPosRankSum=-0.525;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,16,0:0.444,0.000:36:12,8,0:8,8,0:48:84,0,50,563,671,1234:255,0,255:18,0:4.9121e+01,7.4811e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,6,10:10,10,8,8 chr1 247655276 . T . PASS END=247655279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1089:0,82,255:31,0 chr1 247655280 . A . PASS END=247655281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:66:33:0,66,1070:0,66,255:28,0 chr1 247655282 . C . PASS END=247655286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1305:0,91,255:30,0 chr1 247655287 . A . PASS END=247655287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,965:0,44,255:27,0 chr1 247655288 . C . PASS END=247655290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr1 247655291 . C . PASS END=247655292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:34:0,63,1077:0,63,255:26,0 chr1 247655293 . T . PASS END=247655295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,86,255:27,0 chr1 247655296 . T . PASS END=247655296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:41:34:0,41,1072:0,41,255:26,0 chr1 247655297 . C . PASS END=247655302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1113:0,82,255:28,0 chr1 247655303 . T . PASS END=247655303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,859:0,59,255:28,0 chr1 247655304 . T . PASS END=247655305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr1 247655306 . G . PASS END=247655312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr1 247655313 . A . PASS END=247655315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247655316 . G . PASS END=247655316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,850:0,67,255:26,0 chr1 247655317 . A . PASS END=247655317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,867:0,34,255:24,0 chr1 247655318 . T . PASS END=247655318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247655319 . G . PASS END=247655320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 247655321 . G . PASS END=247655321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:24,0 chr1 247655322 . A . PASS END=247655329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 247655330 . C . PASS END=247655330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr1 247655331 . A . PASS END=247655351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,808:0,61,255:26,0 chr1 247655352 . G . PASS END=247655353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr1 247655354 . G . PASS END=247655365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr1 247655366 . G . PASS END=247655385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:17,0 chr1 247655386 . A . PASS END=247655391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:16:0,35,585:0,35,255:13,0 chr1 247655392 . G . PASS END=247655392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:11,0 chr1 247694851 . C . PASS END=247694867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr1 247694868 . T . PASS END=247694869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 247694870 . C . PASS END=247694870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr1 247694871 . C . PASS END=247694872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 247694873 . G . PASS END=247694875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr1 247694876 . G . PASS END=247694888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr1 247694889 . T . PASS END=247694889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr1 247694890 . C . PASS END=247694903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:25:0,67,854:0,67,255:26,0 chr1 247694904 . G . PASS END=247694907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 247694908 . G . PASS END=247694908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr1 247694909 . A . PASS END=247694910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 247694911 . G . PASS END=247694912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1069:0,71,255:29,0 chr1 247694913 . C . PASS END=247695032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1117:0,81,255:40,0 chr1 247695033 . G . PASS END=247695033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:35,0 chr1 247695034 . A . PASS END=247695191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:88:36:0,88,1374:0,88,255:40,0 chr1 247695192 . C . PASS END=247695192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1449:0,57,255:38,0 chr1 247695193 . A . PASS END=247695260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:34:0,81,1255:0,81,255:40,0 chr1 247695261 . T . PASS END=247695261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:31,0 chr1 247695262 . G . PASS END=247695280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1127:0,85,255:34,0 chr1 247695281 . A . PASS END=247695281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1143:0,53,255:33,0 chr1 247695282 . A . PASS END=247695282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:34,0 chr1 247695283 . G . PASS END=247695300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1227:0,88,255:34,0 chr1 247695301 . C . PASS END=247695301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:29,0 chr1 247695302 . C . PASS END=247695311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1139:0,80,255:31,0 chr1 247695312 . G . PASS END=247695312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 247695313 . T . PASS END=247695313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 247695314 . A . PASS END=247695325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,1035:0,63,255:26,0 chr1 247695326 . A . PASS END=247695326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:22,0 chr1 247695327 . G . PASS END=247695346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr1 247695347 . G . PASS END=247695347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 247695348 . T . PASS END=247695355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr1 247695356 . C . PASS END=247695356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr1 247695357 . C . PASS END=247695361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 247695362 . A . PASS END=247695362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr1 247695363 . G . PASS END=247695368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr1 247695369 . A . PASS END=247695369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 247695370 . G . PASS END=247695370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 247695371 . G . PASS END=247695371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 247695372 . C . PASS END=247695394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,882:0,62,255:26,0 chr1 247695395 . T . PASS END=247695395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr1 247695396 . G . PASS END=247695396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 247695397 . T . PASS END=247695398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr1 247695399 . G . PASS END=247695399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 247695400 . A . PASS END=247695400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr1 247695401 . T . PASS END=247695416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,954:0,67,255:27,0 chr1 247695417 . A . PASS END=247695445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1105:0,80,255:33,0 chr1 247695446 . C . PASS END=247695446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1105:0,60,255:32,0 chr1 247695447 . G . PASS END=247695474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1225:0,96,255:33,0 chr1 247695475 . A . PASS END=247695475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr1 247695476 . C . PASS END=247695482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr1 247695483 . T . PASS END=247695483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1122:0,52,255:27,0 chr1 247695484 . T . PASS END=247695494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr1 247695495 . A . PASS END=247695495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 247695496 . A . PASS END=247695507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:32,0 chr1 247695508 . G . PASS END=247695508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr1 247695509 . A . PASS END=247695509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 247695510 . A . PASS END=247695510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:30,0 chr1 247695511 . C . PASS END=247695574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:33:0,92,1310:0,92,255:40,0 chr1 247695575 . G . PASS END=247695611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1280:0,89,255:37,0 chr1 247695612 . G A, 163.91 PASS DP=39;MQ=249.48;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,16,0:0,23,0:114:202,117,0,1453,117,1453:255,117,0:0,0:1.6391e+02,1.1391e+02,0.0000e+00,4.5000e+02,1.4868e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,20:0,0,16,23 chr1 247695613 . G . PASS END=247695649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:94:36:0,94,1280:0,94,255:40,0 chr1 247695650 . T . PASS END=247695718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:35:0,82,1333:0,82,255:40,0 chr1 247695719 . A . PASS END=247695755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,126,255:40,0 chr1 247695756 . T C, 203.49 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,22,0:0,30,0:153:241,157,0,341,341,341:255,156,0:0,0:2.0349e+02,1.5349e+02,0.0000e+00,3.3826e+02,3.7303e+02,3.4127e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,30:0,0,32,20 chr1 247695757 . G . PASS END=247695793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,102,1467:0,102,255:40,0 chr1 247695794 . A . PASS END=247695813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1300:0,106,255:38,0 chr1 247712494 . A . PASS END=247712522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,137,255:40,0 chr1 247719709 . T . PASS END=247719731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:59:0,120,1800:0,168,255:40,0 chr1 247719732 . A . PASS END=247719768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,175,255:40,0 chr1 247726892 . G . PASS END=247726941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:73:0,120,1800:0,181,255:40,0 chr1 247729233 . G . PASS END=247729257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:94:0,120,1800:0,197,255:40,0 chr1 247729258 . T . PASS END=247729261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,3:94:99:88:0,120,1800:0,209,255:40,0 chr1 247737445 . G . PASS END=247737684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:33:0,82,1200:0,82,255:40,0 chr1 247751662 . A . PASS END=247751693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,134,255:40,0 chr1 247751694 . C . PASS END=247751730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,150,255:40,0 chr1 247751731 . C G, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.528;ReadPosRankSum=3.322;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,39,0:0.629,0.000:62:8,22,0:15,17,0:45:85,0,44,1358,794,2152:255,0,255:23,0:5.0000e+01,1.2684e-04,4.7172e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,21,18:14,9,18,21 chr1 247751732 . C . PASS END=247751768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,143,255:40,0 chr1 247751769 . T . PASS END=247751872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1164:0,83,255:40,0 chr1 247751873 . T . PASS END=247751888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:61:26:0,61,862:0,61,255:26,0 chr1 247751889 . C . PASS END=247751889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr1 247751890 . A . PASS END=247751900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,930:0,62,255:24,0 chr1 247751901 . T . PASS END=247751901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:23,0 chr1 247751902 . A . PASS END=247751920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,65,255:25,0 chr1 247751921 . A . PASS END=247751921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:20,0 chr1 247751922 . C . PASS END=247751947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,898:0,62,255:26,0 chr1 247751948 . C . PASS END=247751981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,966:0,81,255:31,0 chr1 247751982 . C . PASS END=247751987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 247751988 . C . PASS END=247752003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1000:0,68,255:25,0 chr1 247752004 . T . PASS END=247752004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,799:0,23,255:21,0 chr1 247752005 . G . PASS END=247752018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:24,0 chr1 247752019 . G C, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.415;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:5,9,0:7,6,0:48:85,0,49,528,429,958:255,0,255:10,0:5.0000e+01,6.9116e-05,5.2275e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,10,4,11:5,7,6,9 chr1 247752020 . T . PASS END=247752054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,878:0,60,255:26,0 chr1 247752055 . C . PASS END=247752056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 247752057 . T . PASS END=247752072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,984:0,68,255:26,0 chr1 247752073 . T . PASS END=247752073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr1 247752074 . T . PASS END=247752105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr1 247752106 . T . PASS END=247752108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:22,0 chr1 247752109 . A . PASS END=247752123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr1 247752124 . G . PASS END=247752136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,923:0,75,255:26,0 chr1 247752137 . C . PASS END=247752160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1227:0,88,255:33,0 chr1 247752161 . T C, 39.26 PASS DP=35;MQ=250.00;MQRankSum=4.673;ReadPosRankSum=0.338;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,11,0:0.314,0.000:35:12,6,0:12,5,0:39:74,0,50,393,840,1233:255,0,255:22,0:3.9263e+01,5.3639e-04,5.3001e+01,3.9311e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,6,9,2:8,16,8,3 chr1 247752162 . G . PASS END=247752198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1194:0,83,255:36,0 chr1 247752199 . T . PASS END=247752204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1324:0,92,255:35,0 chr1 247752205 . T . PASS END=247752205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1202:0,53,255:33,0 chr1 247752206 . G . PASS END=247752271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1366:0,84,255:40,0 chr1 247752272 . T . PASS END=247752272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1380:0,68,255:37,0 chr1 247752273 . G . PASS END=247752329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1188:0,85,255:39,0 chr1 247752330 . C . PASS END=247752366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,92,255:34,0 chr1 247752367 . A G, 50.00 PASS DP=35;MQ=250.00;MQRankSum=4.933;ReadPosRankSum=1.330;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,21,0:0.600,0.000:35:10,10,0:4,11,0:47:85,0,47,693,501,1193:255,0,255:14,0:5.0000e+01,8.4648e-05,5.0235e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,9,12:5,9,14,7 chr1 247752368 . G . PASS END=247752371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1266:0,91,255:34,0 chr1 247752372 . A . PASS END=247752373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:67:35:0,67,1148:0,67,255:33,0 chr1 247752374 . A . PASS END=247752375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1234:0,86,255:34,0 chr1 247752376 . A . PASS END=247752376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:32,0 chr1 247752377 . A . PASS END=247752380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1225:0,86,255:33,0 chr1 247752381 . A . PASS END=247752381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:32,0 chr1 247752382 . T . PASS END=247752383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 247752384 . C . PASS END=247752384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:30,0 chr1 247752385 . G . PASS END=247752404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1176:0,91,255:40,0 chr1 247752405 . G . PASS END=247752592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1135:0,85,255:40,0 chr1 247752593 . C . PASS END=247752615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,77,255:26,0 chr1 247768888 . A . PASS END=247768888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr1 247768889 . T . PASS END=247768890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr1 247768891 . G . PASS END=247768913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1034:0,87,255:35,0 chr1 247768914 . A . PASS END=247768914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr1 247768915 . A . PASS END=247769024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:35:0,92,1240:0,92,255:40,0 chr1 247769025 . C . PASS END=247769061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:60:0,105,1778:0,105,255:40,0 chr1 247769062 . A G, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.588;ReadPosRankSum=1.448;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,30,0:0.508,0.000:59:14,12,0:15,18,0:48:85,0,50,1020,906,1926:255,0,255:27,0:5.0000e+01,6.5492e-05,5.2944e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,12,18:18,11,16,14 chr1 247769063 . T . PASS END=247769099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:57:0,108,1800:0,108,255:40,0 chr1 247769100 . C . PASS END=247769714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,105,1620:0,105,255:40,0 chr1 247769715 . C . PASS END=247769751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,109,1454:0,109,255:40,0 chr1 247769752 . A G, 49.00 PASS DP=43;MQ=250.00;MQRankSum=5.564;ReadPosRankSum=1.749;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,19,0:0.442,0.000:43:13,15,0:11,4,0:48:84,0,50,680,785,1464:255,0,255:20,0:4.8998e+01,7.6364e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,8,11:11,13,8,11 chr1 247769753 . T . PASS END=247769780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1350:0,98,255:37,0 chr1 247769781 . A . PASS END=247769781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:28,0 chr1 247769782 . G . PASS END=247769788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr1 247769789 . T . PASS END=247769789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1053:0,49,255:28,0 chr1 247769790 . G . PASS END=247769794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:31,0 chr1 247769795 . A . PASS END=247769795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 247769796 . A . PASS END=247769797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 247769798 . T . PASS END=247769799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,959:0,62,255:28,0 chr1 247769800 . C . PASS END=247769800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 247769801 . T . PASS END=247769801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1003:0,54,255:28,0 chr1 247769802 . C . PASS END=247769806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 247769807 . G . PASS END=247769807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 247769808 . A . PASS END=247769813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 247769814 . G . PASS END=247769814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:27,0 chr1 247769815 . T . PASS END=247769817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr1 247780666 . A . PASS END=247780702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:60:0,120,1800:0,158,255:40,0 chr1 247782924 . G . PASS END=247783245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1191:0,81,255:40,0 chr1 247783246 . C . PASS END=247783246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr1 247783247 . T . PASS END=247783249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 247783250 . T . PASS END=247783251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr1 247783252 . C . PASS END=247783263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr1 247783264 . A . PASS END=247783274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 247783275 . T . PASS END=247783278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 247783279 . C . PASS END=247783286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr1 247783287 . C . PASS END=247783421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1070:0,84,255:40,0 chr1 247783422 . T . PASS END=247783422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1294:0,67,255:30,0 chr1 247783423 . A . PASS END=247783463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:34,0 chr1 247783464 . G . PASS END=247783464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 247783465 . T . PASS END=247783476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1155:0,90,255:31,0 chr1 247783477 . T . PASS END=247783477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:28,0 chr1 247783478 . A . PASS END=247783479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr1 247783480 . T . PASS END=247783480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1070:0,49,255:29,0 chr1 247783481 . A . PASS END=247783481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr1 247783482 . T . PASS END=247783490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1149:0,80,255:31,0 chr1 247783491 . T . PASS END=247783491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr1 247783492 . C . PASS END=247783651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:37:0,82,1286:0,82,255:40,0 chr1 247783652 . T . PASS END=247783652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:37,0 chr1 247783653 . T . PASS END=247783686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1374:0,90,255:40,0 chr1 247783687 . A . PASS END=247783687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1341:0,59,255:37,0 chr1 247783688 . C . PASS END=247783737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:37:0,90,1208:0,90,255:39,0 chr1 247783738 . T . PASS END=247783738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:50:37:0,50,1257:0,50,255:34,0 chr1 247783739 . C . PASS END=247783774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1197:0,88,255:37,0 chr1 247783775 . A . PASS END=247783788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:24:0,60,900:0,72,255:24,0 chr1 247783789 . G . PASS END=247783789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr1 247783790 . A . PASS END=247783806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 247783807 . C . PASS END=247783807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr1 247783808 . T . PASS END=247783811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 247783812 . G . PASS END=247783812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr1 247783813 . T . PASS END=247783814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr1 247783815 . T . PASS END=247783848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr1 247783849 . G . PASS END=247783864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr1 247835420 . C . PASS END=247835741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1161:0,84,255:40,0 chr1 247835742 . A . PASS END=247835778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:44:0,97,1576:0,97,255:40,0 chr1 247835779 . C G, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=2.673;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,24,0:0.533,0.000:45:13,9,0:8,15,0:47:85,0,47,185,185,185:255,0,255:20,0:5.0000e+01,9.0343e-05,4.9665e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,8,13,11:9,12,12,12 chr1 247835780 . A . PASS END=247835816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,117,1767:0,117,255:40,0 chr1 247835817 . C . PASS END=247835912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,102,1566:0,102,255:40,0 chr1 247835913 . A . PASS END=247835949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,120,1800:0,121,255:40,0 chr1 247835950 . T C, 43.76 PASS DP=46;MQ=249.62;MQRankSum=4.938;ReadPosRankSum=1.320;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,17,0:0.370,0.000:46:13,11,0:16,6,0:43:79,0,50,577,1036,1613:255,0,255:27,0:4.3759e+01,2.0450e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,11,6:15,14,9,8 chr1 247835951 . A . PASS END=247835987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1449:0,101,255:40,0 chr1 247835988 . C . PASS END=247836343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:39:0,87,1144:0,87,255:40,0 chr1 247875131 . T . PASS END=247875153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr1 247875154 . G . PASS END=247875162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:28,0 chr1 247875163 . C . PASS END=247875163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr1 247875164 . T . PASS END=247875174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1042:0,80,255:32,0 chr1 247875175 . T . PASS END=247875175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:31,0 chr1 247875176 . A . PASS END=247875233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1173:0,83,255:40,0 chr1 247875234 . T . PASS END=247875234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1143:0,75,255:33,0 chr1 247875235 . G . PASS END=247875238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1316:0,92,255:35,0 chr1 247875239 . A . PASS END=247875239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1255:0,56,255:32,0 chr1 247875240 . G . PASS END=247875250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1310:0,92,255:35,0 chr1 247875251 . A . PASS END=247875251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:31,0 chr1 247875252 . T . PASS END=247875258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1325:0,95,255:33,0 chr1 247875259 . C . PASS END=247875259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1215:0,75,255:31,0 chr1 247875260 . A . PASS END=247875264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr1 247875265 . T . PASS END=247875265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:29,0 chr1 247875266 . G . PASS END=247875270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr1 247875271 . A . PASS END=247875272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:26,0 chr1 247875273 . G . PASS END=247875276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 247875277 . G . PASS END=247875296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:36,0 chr1 247875297 . G . PASS END=247875297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:34,0 chr1 247875298 . A . PASS END=247875313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:37:0,80,1303:0,80,255:38,0 chr1 247875314 . C A, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.248;ReadPosRankSum=2.295;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,20,0:0.526,0.000:38:11,13,0:7,7,0:48:85,0,50,662,599,1261:255,0,255:19,0:5.0000e+01,6.6269e-05,5.2770e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,11,9:8,10,10,10 chr1 247875315 . A . PASS END=247875351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:38:0,87,1352:0,87,255:40,0 chr1 247875352 . T . PASS END=247875377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:43:0,97,1629:0,97,255:40,0 chr1 247875378 . C . PASS END=247875414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,134,255:40,0 chr1 247875415 . A G, 49.42 PASS DP=59;MQ=250.00;MQRankSum=6.565;ReadPosRankSum=0.616;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,27,0:0.458,0.000:59:14,13,0:18,14,0:48:84,0,50,922,1065,1987:255,0,255:31,0:4.9416e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,22,19,8:14,18,9,18 chr1 247875416 . G . PASS END=247875452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,141,255:40,0 chr1 247875453 . A . PASS END=247875533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1119:0,80,255:40,0 chr1 247875534 . T . PASS END=247875534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:30,0 chr1 247875535 . T . PASS END=247875548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr1 247875549 . C . PASS END=247875549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 247875550 . C . PASS END=247875559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1164:0,83,255:28,0 chr1 247875560 . C . PASS END=247875566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr1 247875567 . C . PASS END=247875567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr1 247875568 . T . PASS END=247875570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:22,0 chr1 247875571 . T . PASS END=247875572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr1 247875573 . A . PASS END=247875573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr1 247875574 . G . PASS END=247875603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,886:0,69,255:26,0 chr1 247875604 . C . PASS END=247875606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr1 247875607 . A . PASS END=247875607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr1 247875608 . C G, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=2.693;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:8,5,0:5,9,0:48:85,0,50,500,465,965:255,0,255:11,0:5.0000e+01,6.5492e-05,5.2920e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,10,4:7,6,7,7 chr1 247875609 . A . PASS END=247875621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,972:0,70,255:26,0 chr1 247875622 . G . PASS END=247875628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr1 247875629 . C . PASS END=247875639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,972:0,73,255:25,0 chr1 247875640 . G . PASS END=247875678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:40,0 chr1 247875679 . A . PASS END=247875679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1402:0,65,255:38,0 chr1 247875680 . G . PASS END=247875688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,120,1800:0,123,255:40,0 chr1 247875689 . A G, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.339;ReadPosRankSum=1.898;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,28,0:0.651,0.000:43:8,13,0:7,15,0:43:85,0,42,975,500,1474:255,0,255:15,0:5.0000e+01,1.9415e-04,4.4599e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,18,10:8,7,11,17 chr1 247875690 . C . PASS END=247875726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,102,1499:0,112,255:40,0 chr1 247875727 . C . PASS END=247875805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:41:0,91,1375:0,91,255:40,0 chr1 247875806 . G . PASS END=247875806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:79:50:0,79,1718:0,79,255:40,0 chr1 247875807 . A . PASS END=247875825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:41:0,90,1513:0,90,255:40,0 chr1 247875826 . C . PASS END=247875826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:38,0 chr1 247875827 . T . PASS END=247876057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:94:42:0,94,1529:0,94,255:40,0 chr1 247877230 . T . PASS END=247877256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,188,255:40,0 chr1 247886401 . T . PASS END=247886402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr1 247886403 . A . PASS END=247886404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr1 247886405 . A . PASS END=247886610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:29:0,83,1216:0,83,255:40,0 chr1 247886611 . A . PASS END=247886647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:66:0,120,1800:0,144,255:40,0 chr1 247886648 . G A, 50.00 PASS DP=71;MQ=250.00;MQRankSum=7.234;ReadPosRankSum=3.988;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,37,0:0.521,0.000:71:17,13,0:17,24,0:48:85,0,50,1295,1134,2429:255,0,255:31,0:5.0000e+01,6.6269e-05,5.2806e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,20,20,17:19,15,18,19 chr1 247886649 . A . PASS END=247886685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:59:0,120,1800:0,124,255:40,0 chr1 247886686 . G . PASS END=247887345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:41:0,90,1350:0,91,255:40,0 chr1 247901917 . A . PASS END=247901918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr1 247901919 . G . PASS END=247901919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr1 247901920 . A . PASS END=247902842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:90:34:0,90,1258:0,90,255:40,0 chr1 247902843 . T . PASS END=247902843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:27,0 chr1 247902844 . G . PASS END=247902858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1210:0,86,255:31,0 chr1 247902859 . T . PASS END=247902859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr1 247902860 . G . PASS END=247902861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 247920764 . T . PASS END=247921061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:36:0,83,1302:0,83,255:40,0 chr1 247921062 . A . PASS END=247921062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1263:0,61,255:31,0 chr1 247921063 . C . PASS END=247921099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:35:0,89,1302:0,89,255:38,0 chr1 247921100 . T G, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,20,0:0,21,0:120:208,123,0,1580,123,1580:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,23:0,0,17,24 chr1 247921101 . C . PASS END=247921137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1309:0,81,255:38,0 chr1 247921138 . C . PASS END=247921293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:35:0,82,1305:0,82,255:40,0 chr1 247921294 . A . PASS END=247921296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:76:38:0,76,1307:0,76,255:34,0 chr1 247921297 . G . PASS END=247921314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,102,1530:0,111,255:39,0 chr1 247921315 . A . PASS END=247921351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1498:0,110,255:40,0 chr1 247921352 . C T, 179.42 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,24,0:0,20,0:129:217,132,0,1695,132,1695:255,132,0:0,0:1.7942e+02,1.2942e+02,0.0000e+00,4.5000e+02,1.6419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,15:0,0,23,21 chr1 247921353 . G . PASS END=247921411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,114,1710:0,116,255:40,0 chr1 247921412 . G C, 50.00 PASS DP=57;MQ=250.00;MQRankSum=6.415;ReadPosRankSum=3.220;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:15,17,0:13,11,0:48:85,0,50,953,993,1953:255,0,255:27,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,10,15,13:11,17,18,10 chr1 247921413 . G . PASS END=247921449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,151,255:40,0 chr1 247921450 . T . PASS END=247921679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,116,1800:0,116,255:40,0 chr1 247921680 . C . PASS END=247921708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:50:0,103,1501:0,103,255:40,0 chr1 247938212 . A . PASS END=247938221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:23:0,61,795:0,61,255:26,0 chr1 247938222 . T . PASS END=247938238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:29,0 chr1 247938239 . T . PASS END=247938239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,895:0,70,255:28,0 chr1 247938240 . T . PASS END=247938243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr1 247938244 . T . PASS END=247938244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr1 247938245 . C . PASS END=247938710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:29:0,87,1025:0,87,255:40,0 chr1 247938711 . G . PASS END=247938747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,135,255:40,0 chr1 247938748 . T C, 197.02 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,26,0:0,24,0:147:235,150,0,1885,150,1885:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,28:0,0,26,24 chr1 247938749 . C . PASS END=247938785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:42:0,85,1458:0,85,255:40,0 chr1 247938786 . T . PASS END=247938863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,100,1464:0,100,255:40,0 chr1 247938864 . A . PASS END=247938904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,135,255:40,0 chr1 247938905 . C T, 49.19 PASS DP=52;MQ=250.00;MQRankSum=6.135;ReadPosRankSum=4.993;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:29,23,0:0.442,0.000:52:14,9,0:15,14,0:47:84,0,47,184,184,184:255,0,255:24,0:4.9188e+01,9.5779e-05,5.0000e+01,1.8396e+02,2.1873e+02,1.8697e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,22,13,10:14,15,15,8:247938905 chr1 247938906 . G . PASS END=247938907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr1 247938908 . T C, 867.10 PASS DP=53;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,53,0:1.000,0.000:53:0,23,0:0,30,0:450:905,820,0,1005,1005,1005:255,160,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,21,32:0,0,29,24:247938905 chr1 247938909 . A . PASS END=247938949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,126,255:40,0 chr1 247938950 . T . PASS END=247939123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1170:0,83,255:40,0 chr1 247939124 . A . PASS END=247939124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:28,0 chr1 247939125 . A . PASS END=247939138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1116:0,87,255:29,0 chr1 247978102 . T . PASS END=247978126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1040:0,82,255:37,0 chr1 247978127 . A . PASS END=247978281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,101,1400:0,101,255:40,0 chr1 247978282 . G . PASS END=247978318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,138,255:40,0 chr1 247978319 . A G, 230.13 PASS DP=61;MQ=248.15;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,33,0:0,28,0:180:268,183,0,2321,183,2321:255,183,0:0,0:2.3013e+02,1.8013e+02,0.0000e+00,4.5000e+02,2.1490e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,33:0,0,30,31 chr1 247978320 . T . PASS END=247978356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:53:0,111,1800:0,111,255:40,0 chr1 247978357 . C . PASS END=247978494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:45:0,106,1737:0,106,255:40,0 chr1 247978495 . A . PASS END=247978527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:54:0,84,1260:0,124,255:40,0 chr1 247978528 . C . PASS END=247978540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:66:49:0,66,990:0,140,255:24,0 chr1 247978541 . AAGG A, 49.04 PASS DP=47;MQ=250.00;MQRankSum=5.831;ReadPosRankSum=-0.610;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,21,0:0.447,0.000:47:12,9,0:14,12,0:48:78,0,50,882,1379,2261:255,0,255:24,31:4.9039e+01,7.5847e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:11,15,11,10:13,13,11,10 chr1 247978542 . A . LowGQ END=247978545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:26,31:57:0:48:0,0,0:255,0,255:40,31 chr1 247978546 . G . PASS END=247978591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,120,255:40,0 chr1 247978592 . C . PASS END=247978958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:36:0,94,1264:0,94,255:40,0 chr1 247978959 . G . PASS END=247978995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,115,1800:0,115,255:40,0 chr1 247978996 . A G, 50.00 PASS DP=50;MQ=250.00;MQRankSum=6.054;ReadPosRankSum=4.055;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,25,0:0.500,0.000:50:17,10,0:8,15,0:48:85,0,50,892,890,1782:255,0,255:22,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,9,16:14,11,12,13 chr1 247978997 . A . PASS END=247979031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:38:0,95,1307:0,95,255:40,0 chr1 248004230 . C . PASS END=248004230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr1 248004231 . T . PASS END=248004242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:29,0 chr1 248004243 . T . PASS END=248004244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr1 248004245 . C . PASS END=248004576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:30:0,90,1123:0,90,255:40,0 chr1 248004577 . A . PASS END=248004613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,104,1576:0,104,255:40,0 chr1 248004614 . G A, 187.07 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,19,0:0,28,0:137:225,140,0,1711,140,1711:255,141,0:0,0:1.8707e+02,1.3707e+02,0.0000e+00,4.5000e+02,1.7184e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,30:0,0,27,20 chr1 248004615 . G . PASS END=248004686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:46:0,83,1544:0,83,255:40,0 chr1 248004687 . C G, 191.00 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,20,0:0,28,0:141:229,144,0,1816,144,1816:255,144,0:0,0:1.9100e+02,1.4100e+02,0.0000e+00,4.5000e+02,1.7577e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,32:0,0,32,16 chr1 248004688 . G . PASS END=248004726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,116,1570:0,116,255:40,0 chr1 248004727 . G . PASS END=248004735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,102,1530:0,102,255:39,0 chr1 248004736 . T . PASS END=248004764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,99,255:35,0 chr1 248004765 . A . PASS END=248004770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,95,255:22,0 chr1 248004771 . C . PASS END=248004773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr1 248004774 . G . PASS END=248004774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr1 248004775 . C T, 139.38 PASS DP=31;MQ=249.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:89:177,92,0,1143,92,1143:255,93,0:0,0:1.3938e+02,8.9379e+01,0.0000e+00,4.5000e+02,1.2415e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,23:0,0,22,9 chr1 248004776 . A . PASS END=248004795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,815:0,69,255:23,0 chr1 248004796 . G . PASS END=248004796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr1 248004797 . G . PASS END=248004806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,869:0,69,255:23,0 chr1 248004807 . C . PASS END=248004835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 248004836 . G . PASS END=248004836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 248004837 . T . PASS END=248004837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:18,0 chr1 248004838 . C . PASS END=248004847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:20,0 chr1 248004848 . G C, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,11,0:0,9,0:57:145,60,0,775,60,775:255,60,0:0,0:1.0719e+02,5.7194e+01,8.2835e-06,4.5000e+02,9.1964e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,9:0,0,8,12 chr1 248004849 . A . PASS END=248004849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr1 248004850 . A . PASS END=248004850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr1 248004851 . G . PASS END=248004861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:23,0 chr1 248004862 . A . PASS END=248004862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr1 248004863 . G . PASS END=248004876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr1 248004877 . C T, 121.79 PASS DP=25;MQ=249.42;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,940,75,940:255,75,0:0,0:1.2179e+02,7.1793e+01,2.5886e-07,4.5000e+02,1.0656e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,11:0,0,11,14:248004877 chr1 248004878 . G . PASS END=248004883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1000:0,75,255:26,0 chr1 248004884 . T C, 125.25 PASS DP=26;MQ=249.44;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,26,0:1.000,0.000:26:0,15,0:0,11,0:75:163,78,0,1000,78,1000:255,78,0:0,0:1.2525e+02,7.5250e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,13:0,0,14,12:248004877 chr1 248004885 . A . PASS END=248004902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1000:0,78,255:26,0 chr1 248004903 . G . PASS END=248004917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 248004918 . A . PASS END=248004921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr1 248004922 . A . PASS END=248004922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr1 248004923 . G . PASS END=248004923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 248004924 . A . PASS END=248004932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,941:0,78,255:26,0 chr1 248004933 . C . PASS END=248004946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 248004947 . G . PASS END=248004948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:26,0 chr1 248004949 . T . PASS END=248004959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1032:0,84,255:29,0 chr1 248004960 . A . PASS END=248004963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 248004964 . G . PASS END=248004964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248004965 . C . PASS END=248004968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr1 248004969 . G . PASS END=248004971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr1 248004972 . G . PASS END=248004972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:27,0 chr1 248004973 . T . PASS END=248004973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 248004974 . G . PASS END=248004989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,74,255:26,0 chr1 248004990 . T . PASS END=248004990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr1 248004991 . C . PASS END=248005020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr1 248005021 . A . PASS END=248005023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248005024 . T . PASS END=248005027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 248005028 . G . PASS END=248005031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr1 248005032 . T . PASS END=248005045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr1 248005046 . C . PASS END=248005175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1215:0,84,255:40,0 chr1 248005176 . G . PASS END=248005197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1260:0,101,255:38,0 chr1 248005198 . T . PASS END=248005198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:38:0,69,1035:0,114,255:23,0 chr1 248020549 . A . PASS END=248020555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr1 248020556 . G C, 71.11 PASS DP=8;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,4,0:0,4,0:21:109,24,0,302,24,302:255,24,0:0,0:7.1108e+01,2.1108e+01,3.3789e-02,2.9921e+02,5.5878e+01,3.0221e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,2:0,0,4,4 chr1 248020557 . G . PASS END=248020577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr1 248020578 . G . PASS END=248020592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr1 248020593 . G . PASS END=248020593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr1 248020594 . T . PASS END=248020629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:18,0 chr1 248020630 . A . PASS END=248020659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr1 248020660 . A . PASS END=248020660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr1 248020661 . G . PASS END=248020662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 248020663 . T . PASS END=248020663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr1 248020664 . G . PASS END=248020665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 248020666 . A . PASS END=248020705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr1 248020706 . G . PASS END=248020730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr1 248020731 . G . PASS END=248020732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 248020733 . G . PASS END=248020739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 248020740 . C . PASS END=248020744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 248020745 . C . PASS END=248020747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr1 248020748 . C . PASS END=248020748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 248020749 . G . PASS END=248020753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr1 248020754 . T . PASS END=248020754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr1 248020755 . T . PASS END=248020776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr1 248020777 . G . PASS END=248020777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 248020778 . G . PASS END=248020779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr1 248020780 . C . PASS END=248020781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,405:0,22,255:9,0 chr1 248020782 . G . PASS END=248020796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:10,0 chr1 248020797 . G . PASS END=248020801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 248020802 . T . PASS END=248020802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 248020803 . G . PASS END=248020829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr1 248020830 . G . PASS END=248020834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 248020835 . G . PASS END=248020835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 248020836 . C . PASS END=248020838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248020839 . G . PASS END=248020839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 248020840 . C . PASS END=248020844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248020845 . C . LowGQ END=248020845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:8,0 chr1 248020846 . G . PASS END=248020846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 248020847 . G . PASS END=248020848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 248020849 . G . LowGQ END=248020849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,200:20,0,219:7,0 chr1 248020850 . A . PASS END=248020850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr1 248020851 . G . PASS END=248020851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 248020852 . G . PASS END=248020853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 248020854 . C . PASS END=248020854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr1 248020855 . C . PASS END=248020856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 248020857 . G . PASS END=248020857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 248020858 . A . PASS END=248020858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr1 248020859 . G . PASS END=248020859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr1 248020860 . C . PASS END=248020861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 248020862 . G . PASS END=248020862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr1 248020863 . C . PASS END=248020863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 248020864 . T . PASS END=248020864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 248020865 . T . PASS END=248020865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 248020866 . C . LowGQ END=248020866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr1 248020867 . T . PASS END=248020868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr1 248020869 . C . PASS END=248020869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 248020870 . G . PASS END=248020870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr1 248020871 . A . PASS END=248020871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr1 248020872 . G . PASS END=248020872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 248020873 . G . PASS END=248020873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 248020874 . A . PASS END=248020874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248020875 . G . PASS END=248020875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 248020876 . G . PASS END=248020877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248020878 . C . PASS END=248020879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 248020880 . A . PASS END=248020880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248020881 . G . PASS END=248020881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr1 248020882 . G . PASS END=248020883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248020884 . G . PASS END=248020884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 248020885 . G . PASS END=248020886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr1 248020887 . G . LowGQ END=248020887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:7,0 chr1 248020888 . C . PASS END=248020888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 248020889 . T . LowGQ END=248020890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:7,0 chr1 248020891 . T . PASS END=248020891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr1 248020892 . G . LowGQ END=248020892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:7,0 chr1 248020893 . C . PASS END=248020893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr1 248020894 . T . LowGQ END=248020894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:6,0 chr1 248020895 . G . PASS END=248020914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,13,202:6,0 chr1 248020915 . G . LowGQ END=248020968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr1 248023919 . G . PASS END=248024014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:43:0,96,1496:0,96,255:40,1 chr1 248028007 . G . PASS END=248028024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:19,0 chr1 248028025 . A . PASS END=248028031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr1 248028032 . G . PASS END=248028032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr1 248028033 . C . PASS END=248028034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr1 248028035 . T . PASS END=248028035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr1 248028036 . C . PASS END=248028047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr1 248028048 . T . PASS END=248028048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 248028049 . G . PASS END=248028058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr1 248028059 . G . PASS END=248028059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 248028060 . T . PASS END=248028065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 248028066 . T . PASS END=248028066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr1 248028067 . C . PASS END=248028087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,869:0,69,255:26,0 chr1 248028088 . C . PASS END=248028088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 248028089 . A . PASS END=248028090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:27,0 chr1 248028091 . C . PASS END=248028091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 248028092 . T . PASS END=248028097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,994:0,70,255:26,0 chr1 248028098 . G . PASS END=248028100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 248028101 . T . PASS END=248028105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 248028106 . G . PASS END=248028107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248028108 . G . PASS END=248028108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,0 chr1 248028109 . G . PASS END=248028109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248028110 . A . PASS END=248028110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,929:0,18,255:24,0 chr1 248028111 . G . PASS END=248028114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 248028115 . C . PASS END=248028115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr1 248028116 . G . PASS END=248028141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1185:0,80,255:32,0 chr1 248028142 . A . PASS END=248028142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:27,0 chr1 248028143 . G . PASS END=248028151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1094:0,90,255:30,0 chr1 248028152 . G . PASS END=248028152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr1 248028153 . G . PASS END=248028159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1117:0,90,255:30,0 chr1 248028160 . C . PASS END=248028181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr1 248028182 . A . PASS END=248028198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,807:0,66,255:22,0 chr1 248028199 . C . PASS END=248028218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr1 248028219 . G A, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=1.268;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,11,0:0.611,0.000:18:3,5,0:4,6,0:48:85,0,48,365,247,612:255,0,217:6,0:5.0000e+01,7.6364e-05,5.1216e+01,3.6460e+02,2.8207e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,4,7:2,5,4,7 chr1 248028220 . G . PASS END=248028221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr1 248028222 . C . PASS END=248028231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 248028232 . C . PASS END=248028237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 248031147 . G . PASS END=248031169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:37:0,82,1398:0,82,255:40,0 chr1 248031265 . A . PASS END=248031351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,82,255:40,0 chr1 248031352 . A . PASS END=248031352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:25,0 chr1 248031353 . A . PASS END=248031355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 248031356 . A . PASS END=248031365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,71,255:25,0 chr1 248039202 . T . PASS END=248039202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 248039203 . G . PASS END=248039224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:18,0 chr1 248039225 . A . PASS END=248039225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr1 248039226 . C . PASS END=248039236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr1 248039237 . A . PASS END=248039256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:22:0,62,730:0,62,255:26,0 chr1 248039257 . C . PASS END=248039259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 248039260 . G . PASS END=248039288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1197:0,86,255:33,0 chr1 248039289 . G . PASS END=248039289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr1 248039290 . G . PASS END=248039293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:33,0 chr1 248039294 . G A, 48.41 PASS DP=35;MQ=250.00;MQRankSum=4.983;ReadPosRankSum=1.950;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,15,0:0.429,0.000:35:9,7,0:11,8,0:47:83,0,50,507,679,1186:255,0,255:18,0:4.8409e+01,8.4389e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,10,5:12,8,10,5 chr1 248039295 . T . PASS END=248039311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1263:0,89,255:36,0 chr1 248039312 . C . PASS END=248039312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr1 248039313 . G . PASS END=248039331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1319:0,95,255:37,0 chr1 248039332 . C . PASS END=248039675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:35:0,87,1329:0,87,255:40,0 chr1 248039676 . T . PASS END=248039712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1186:0,97,255:36,0 chr1 248039713 . A G, 50.00 PASS DP=37;MQ=249.71;MQRankSum=5.089;ReadPosRankSum=2.397;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,22,0:0.595,0.000:37:7,14,0:8,8,0:47:85,0,47,758,529,1286:255,0,255:10,0:5.0000e+01,8.4389e-05,5.0244e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,8,14:7,8,12,10 chr1 248039714 . A . PASS END=248039727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:28,0 chr1 248039728 . A . PASS END=248039728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr1 248039729 . G . PASS END=248039743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr1 248039744 . A . PASS END=248039750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr1 248039751 . A . PASS END=248039759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr1 248039760 . C . PASS END=248039760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr1 248039761 . T . PASS END=248039766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 248039767 . T . PASS END=248039791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,568:0,51,255:18,0 chr1 248058889 . A . PASS END=248058916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,125,255:40,0 chr1 248058917 . C . PASS END=248059069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:36:0,81,1215:0,98,255:40,0 chr1 248059070 . T . PASS END=248059070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:30,0 chr1 248059071 . C . PASS END=248059078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1224:0,83,255:32,0 chr1 248059079 . C . PASS END=248059079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:27,0 chr1 248059080 . C . PASS END=248059116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1127:0,88,255:34,0 chr1 248059117 . T . PASS END=248059117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr1 248059118 . C . PASS END=248059141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1218:0,86,255:34,0 chr1 248059142 . T . PASS END=248059142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:21:33:0,21,995:0,21,255:28,0 chr1 248059143 . T . PASS END=248059199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1072:0,82,255:34,0 chr1 248059200 . C . PASS END=248059205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:26,0 chr1 248059206 . T . PASS END=248059206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:24,0 chr1 248059207 . C . PASS END=248059208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:26,0 chr1 248059209 . G . PASS END=248059209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:26,0 chr1 248059210 . G . PASS END=248059211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr1 248059212 . T . PASS END=248059219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr1 248059220 . A . PASS END=248059220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 248059221 . G . PASS END=248059223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr1 248059224 . C . PASS END=248059290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,922:0,69,255:26,0 chr1 248059291 . A . PASS END=248059292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr1 248059293 . C . PASS END=248059316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,901:0,62,255:26,0 chr1 248059317 . C . PASS END=248059317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:22,0 chr1 248059318 . T . PASS END=248059360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr1 248059361 . C . PASS END=248059361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248059362 . C . PASS END=248059364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr1 248059365 . G . PASS END=248059372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr1 248059373 . T . PASS END=248059385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,947:0,64,255:25,0 chr1 248059386 . A . PASS END=248059390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,984:0,78,255:26,0 chr1 248059391 . G . PASS END=248059393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr1 248059394 . G . PASS END=248059395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr1 248059396 . G . PASS END=248059402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr1 248059403 . A . PASS END=248059403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr1 248059404 . C . PASS END=248059422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr1 248059423 . C T, 46.05 PASS DP=32;MQ=249.81;MQRankSum=3.832;ReadPosRankSum=3.954;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,12,0:0.387,0.000:31:7,9,0:12,3,0:45:81,0,50,372,664,1035:255,0,255:18,0:4.6046e+01,1.2969e-04,5.3000e+01,3.7178e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,7,5:11,8,10,2 chr1 248059424 . G . PASS END=248059438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:32:0,88,1142:0,88,255:34,0 chr1 248059439 . T . PASS END=248059439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr1 248059440 . G . PASS END=248059454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1202:0,83,255:33,0 chr1 248059455 . C . PASS END=248059455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr1 248059456 . G A, 151.86 PASS DP=35;MQ=249.83;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,20,0:0,15,0:102:190,105,0,290,290,290:255,105,0:0,0:1.5186e+02,1.0186e+02,0.0000e+00,2.8663e+02,3.2140e+02,2.8964e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,21,14:0,0,22,13 chr1 248059457 . T . PASS END=248059463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1271:0,89,255:33,0 chr1 248059464 . T . PASS END=248059464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:32,0 chr1 248059465 . G . PASS END=248059475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:35,0 chr1 248059476 . A C, 155.35 PASS DP=36;MQ=249.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1396,108,1396:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,15:0,0,19,17 chr1 248059477 . G . PASS END=248059500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1194:0,86,255:33,0 chr1 248059501 . G . PASS END=248059501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 248059502 . G . PASS END=248059511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:33,0 chr1 248059512 . G . PASS END=248059512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr1 248059513 . T . PASS END=248059513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr1 248059514 . C . PASS END=248059544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:35,0 chr1 248059545 . C . PASS END=248059561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr1 248059562 . T . PASS END=248059562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr1 248059563 . G . PASS END=248059650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:25,0 chr1 248059651 . A . PASS END=248059651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr1 248059652 . T . PASS END=248059653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr1 248059654 . A . PASS END=248059654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:24,0 chr1 248059655 . T . PASS END=248059663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1008:0,71,255:25,0 chr1 248059664 . A . PASS END=248059664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:25,0 chr1 248059665 . C . PASS END=248059668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr1 248059669 . C . PASS END=248059669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr1 248059670 . A . PASS END=248059680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:30,0 chr1 248059681 . A . PASS END=248059681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr1 248059682 . G . PASS END=248059695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:31:0,86,1196:0,86,255:34,0 chr1 248059696 . C . PASS END=248059696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:33,0 chr1 248059697 . A . PASS END=248059702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1272:0,102,255:36,0 chr1 248059703 . T A, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,36,0:1.000,0.000:36:0,14,0:0,22,0:105:193,108,0,1396,108,1396:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,20:0,0,20,16:248059703 chr1 248059704 . G . PASS END=248059711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 248059712 . T C, 157.89 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,37,0:1.000,0.000:37:0,14,0:0,23,0:108:196,111,0,1381,111,1381:255,111,0:0,0:1.5789e+02,1.0789e+02,0.0000e+00,4.5000e+02,1.4266e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,20:0,0,20,17:248059703 chr1 248059713 . G . PASS END=248059751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1279:0,89,255:37,0 chr1 248059752 . C . PASS END=248059802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1350:0,85,255:40,0 chr1 248059803 . T . PASS END=248059803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:30,0 chr1 248059804 . C . PASS END=248059814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1218:0,86,255:31,0 chr1 248059815 . A . PASS END=248059815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr1 248059816 . G . PASS END=248059818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr1 248059819 . C . PASS END=248059822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 248059823 . G . PASS END=248059833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr1 248084320 . A . PASS END=248084396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,132,255:40,0 chr1 248084397 . C . PASS END=248084433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:78:0,120,1800:0,188,255:40,0 chr1 248084434 . G A, 281.72 PASS DP=80;MQ=119.47;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,80,0:1.000,0.000:80:0,38,0:0,42,0:232:320,235,0,420,420,420:255,241,0:0,0:2.8172e+02,2.3172e+02,0.0000e+00,4.1649e+02,4.4853e+02,4.1950e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,36,44:0,0,36,44 chr1 248084435 . G . PASS END=248084463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,3:71:97:69:0,97,1800:0,97,255:40,0 chr1 248084464 . T C, 142.47 PASS DP=71;MQ=67.70;MQRankSum=2.901;ReadPosRankSum=1.186;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:3,68,0:0.958,0.000:71:1,27,0:2,41,0:94:180,97,0,2521,205,2629:255,97,0:3,0:1.4247e+02,9.4370e+01,0.0000e+00,4.5000e+02,2.3643e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,0,25,43:1,2,38,30 chr1 248084465 . G . PASS END=248084501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,157,255:40,0 chr1 248084502 . G . PASS END=248084510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,139,255:40,0 chr1 248084511 . T . PASS END=248084511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:61:59:0,61,1956:0,61,255:40,0 chr1 248084512 . T . PASS END=248084571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:36:0,96,1440:0,104,255:40,0 chr1 248084572 . A . PASS END=248084578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:34,0 chr1 248084579 . G . LowGQ END=248084579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:0:35:0,0,1049:11,0,255:26,0 chr1 248084580 . T . PASS END=248084581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,89,255:28,0 chr1 248084582 . A . PASS END=248084596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:26,0 chr1 248084597 . C . PASS END=248084597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr1 248084598 . T . PASS END=248084603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 248084604 . T . PASS END=248084608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,836:0,53,255:19,0 chr1 248084609 . C T, 97.86 PASS DP=21;MQ=40.55;FractionInformativeReads=0.952 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,8,0:0,12,0:57:136,60,0,730,60,730:255,60,0:0,0:9.7856e+01,5.6731e+01,9.3190e-06,4.5000e+02,9.1501e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,20:0,0,12,8 chr1 248084610 . G . PASS END=248084624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,712:0,44,255:19,0 chr1 248084625 . C G, 82.75 PASS DP=19;MQ=36.27;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,18,0:1.000,0.000:18:0,8,0:0,10,0:42:121,45,0,221,221,221:255,54,0:0,0:8.2754e+01,4.1629e+01,2.9848e-04,2.1752e+02,2.5229e+02,2.2053e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,18:0,0,10,8:248084625 chr1 248084626 . C . PASS END=248084626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr1 248084627 . C T, 82.75 PASS DP=19;MQ=36.27;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,18,0:1.000,0.000:18:0,8,0:0,10,0:42:121,45,0,221,221,221:255,54,0:0,0:8.2754e+01,4.1629e+01,2.9848e-04,2.1752e+02,2.5229e+02,2.2053e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,18:0,0,10,8:248084625 chr1 248084628 . C . PASS END=248084630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 248084631 . A C, 82.75 PASS DP=19;MQ=36.27;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,18,0:1.000,0.000:18:0,8,0:0,10,0:42:121,45,0,221,221,221:255,54,0:0,0:8.2755e+01,4.1630e+01,2.9848e-04,2.1752e+02,2.5229e+02,2.2053e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,0,18:0,0,10,8:248084625 chr1 248084632 . C . PASS END=248084632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr1 248084633 . T . PASS END=248084644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,540:0,32,255:13,0 chr1 248084645 . A . PASS END=248084661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,327:0,27,255:9,0 chr1 248084662 . G . PASS END=248084665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr1 248084666 . T . PASS END=248084673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248084674 . G . PASS END=248084688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr1 248084689 . G . PASS END=248084703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,219:6,0 chr1 248084704 . C . PASS END=248084717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr1 248084718 . C . PASS END=248084746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 248084747 . A C, 62.42 PASS DP=11;MQ=27.46;FractionInformativeReads=0.909 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,6,0:0,4,0:27:100,30,0,200,200,200:255,0,6:0,0:6.2425e+01,2.7091e+01,8.4955e-03,1.9719e+02,2.3196e+02,2.0021e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,8,2:0,0,6,4 chr1 248084748 . C . PASS END=248084748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 248084749 . C CA,A, 62.20 PASS DP=11;MQ=28.60;FractionInformativeReads=0.818 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 2/2:0,0,9,0:0.000,1.000,0.000:9:0,0,5,0:0,0,4,0:27:100,322,92,30,25,0,422,422,422,422:255,33,0:0,2:6.2199e+01,3.1386e+02,8.7673e+01,2.6865e+01,5.2339e+01,8.9754e-03,4.1863e+02,4.4853e+02,4.5000e+02,4.2163e+02:0.00,30.00,33.01,34.77,64.77,37.78,34.77,64.77,69.54,37.78:0,0,8,1:0,0,6,3 chr1 248084750 . T . LowGQ END=248084750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:11,0 chr1 248084751 . G . PASS END=248084760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,559:0,45,255:19,0 chr1 248084761 . C . PASS END=248084762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr1 248084763 . C . PASS END=248084763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr1 248084764 . C . PASS END=248084791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,790:0,63,255:26,0 chr1 248084792 . C . PASS END=248084797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1047:0,81,255:33,0 chr1 248084798 . C . PASS END=248084798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:22:33:0,22,1116:0,22,255:30,0 chr1 248084799 . T . PASS END=248084824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:33:0,96,1413:0,99,255:40,0 chr1 248084825 . C T, 44.72 PASS DP=49;MQ=28.58;MQRankSum=0.285;ReadPosRankSum=-2.171;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:10,39,0:0.796,0.000:49:3,20,0:7,19,0:5:81,6,0,1344,327,1665:255,0,210:10,0:4.4720e+01,5.0532e+00,1.6267e+00,4.5000e+02,3.6057e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,0,24,15:3,7,21,18 chr1 248084826 . A . PASS END=248084853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,131,255:40,0 chr1 248084854 . A G, 0.03 DRAGENSnpHardQUAL DP=49;MQ=28.58;MQRankSum=0.112;ReadPosRankSum=-0.360;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:39,10,0:0.204,0.000:49:20,3,0:19,7,0:22:13,0,40,358,1371,1728:240,0,255:38,0:2.9886e-02,2.1638e+01,6.4305e+01,3.7923e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,25,10,0:21,18,3,7 chr1 248084855 . C . PASS END=248084908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:41:0,88,1527:0,88,255:40,0 chr1 248084909 . T G, 12.02 PASS DP=42;MQ=28.01;MQRankSum=1.046;ReadPosRankSum=0.776;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,7,0:0.167,0.000:42:18,3,0:17,4,0:12:47,0,30,147,147,147:145,0,255:27,0:1.2021e+01,2.8369e-01,3.3617e+01,1.4679e+02,1.8156e+02,1.4980e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,22,6,1:20,15,4,3 chr1 248084910 . G . PASS END=248084933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,85,255:33,0 chr1 248084934 . C . PASS END=248084934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr1 248084935 . C . PASS END=248084936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248084937 . G . PASS END=248084944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1025:0,71,255:27,0 chr1 248084945 . T . PASS END=248084952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr1 248084953 . A . PASS END=248084958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 248084959 . T . PASS END=248084963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr1 248084964 . C . PASS END=248084965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr1 248084966 . A . PASS END=248084968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr1 248084969 . G . PASS END=248084979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1062:0,87,255:29,0 chr1 248084980 . G T, 35.34 PASS DP=29;MQ=32.52;MQRankSum=2.088;ReadPosRankSum=2.179;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,10,0:0.345,0.000:29:9,7,0:10,3,0:30:70,0,29,358,671,1029:255,0,255:19,0:3.5340e+01,4.0095e-03,3.2004e+01,3.5764e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,7,3:9,10,8,2 chr1 248084981 . C . PASS END=248085017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1185:0,80,255:40,0 chr1 248085018 . G . PASS END=248085070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,100,1141:0,100,255:40,0 chr1 248085071 . G . PASS END=248085107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,105,1568:0,105,255:40,0 chr1 248085108 . C T, 49.11 PASS DP=47;MQ=59.56;MQRankSum=4.198;ReadPosRankSum=3.151;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,34,0:0.723,0.000:47:5,22,0:8,12,0:16:84,0,13,1150,464,1614:255,0,255:8,0:4.9112e+01,1.1201e-01,1.5943e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,21,13:6,7,17,17 chr1 248085109 . A . PASS END=248085148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,107,1435:0,107,255:40,0 chr1 248085149 . C . LowGQ END=248085149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,7:49:0:49:0,0,1282:124,0,255:40,0 chr1 248085150 . T . PASS END=248085186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,124,255:40,0 chr1 248085187 . G . PASS END=248085258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:41:0,85,1488:0,85,255:40,0 chr1 248097068 . A . PASS END=248097070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr1 248097071 . A . PASS END=248097071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1258:0,62,255:36,0 chr1 248097072 . T . PASS END=248098057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:39:0,93,1427:0,93,255:40,0 chr1 248112160 . A . PASS END=248112589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:84:53:0,84,1800:0,84,255:40,0 chr1 248112590 . T . PASS END=248112626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,197,255:40,0 chr1 248112627 . T C, 52.59 PASS DP=75;MQ=70.98;MQRankSum=3.737;ReadPosRankSum=0.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:11,64,0:0.853,0.000:75:4,36,0:7,28,0:7:89,8,0,2243,402,2636:255,0,193:11,0:5.2592e+01,6.5417e+00,1.0887e+00,4.5000e+02,4.3473e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,26,38:8,3,34,30 chr1 248112628 . G . PASS END=248112664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,150,255:40,0 chr1 248112665 . G . PASS END=248112707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,145,255:40,0 chr1 248112708 . G . PASS END=248112744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,158,255:40,0 chr1 248112745 . G T, 84.36 PASS DP=51;MQ=56.42;MQRankSum=2.400;ReadPosRankSum=1.104;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:4,47,0:0.922,0.000:51:2,24,0:2,23,0:39:122,42,0,1666,185,1809:255,0,2:3,0:8.4363e+01,3.9313e+01,5.0895e-04,4.5000e+02,2.1714e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,26,21:3,1,21,26 chr1 248112746 . G . PASS END=248112753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,120,1800:0,137,255:40,0 chr1 248112754 . T . LowGQ END=248112754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:0:53:0,0,1479:5,0,255:40,0 chr1 248112755 . T . PASS END=248112761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,147,255:40,0 chr1 248112762 . T C, 82.63 PASS DP=47;MQ=66.06;MQRankSum=2.240;ReadPosRankSum=0.343;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:2,45,0:0.957,0.000:47:2,22,0:0,23,0:37:120,40,0,220,220,220:255,72,0:2,0:8.2630e+01,3.6680e+01,9.3277e-04,2.1740e+02,2.5217e+02,2.2041e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,0,27,18:2,0,22,23:248112762 chr1 248112763 . G A, 82.63 PASS DP=47;MQ=66.06;MQRankSum=2.240;ReadPosRankSum=0.501;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:2,45,0:0.957,0.000:47:2,22,0:0,23,0:37:120,40,0,220,220,220:255,72,0:2,0:8.2630e+01,3.6680e+01,9.3277e-04,2.1740e+02,2.5217e+02,2.2041e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,0,27,18:2,0,22,23:248112762 chr1 248112764 . C . PASS END=248112770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:97:47:0,97,1570:0,97,255:40,0 chr1 248112771 . C T, 124.05 PASS DP=48;MQ=67.01;MQRankSum=2.244;ReadPosRankSum=1.419;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:2,46,0:0.958,0.000:48:2,23,0:0,23,0:78:162,81,0,1673,153,1745:255,67,0:2,0:1.2405e+02,7.8097e+01,0.0000e+00,4.5000e+02,1.8443e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,0,22,24:2,0,25,21:248112762 chr1 248112772 . T . PASS END=248112808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,111,1467:0,111,255:40,0 chr1 248112809 . A G, 182.79 PASS DP=46;MQ=78.06;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,22,0:0,24,0:135:221,138,0,1776,138,1776:255,138,0:0,0:1.8279e+02,1.3544e+02,0.0000e+00,4.5000e+02,1.7021e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,25:0,0,21,25 chr1 248112810 . T . PASS END=248112835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,127,255:40,0 chr1 248112836 . A G, 205.48 PASS DP=54;MQ=80.30;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,28,0:0,26,0:158:243,161,0,1980,161,1980:255,162,0:0,0:2.0548e+02,1.5813e+02,0.0000e+00,4.5000e+02,1.9290e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,27:0,0,29,25 chr1 248112837 . C . PASS END=248112873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:52:0,120,1800:0,129,255:40,0 chr1 248112874 . A . PASS END=248112929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,117,1778:0,117,255:40,0 chr1 248112930 . T . PASS END=248112930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1596:0,61,255:40,0 chr1 248112931 . T . PASS END=248112988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,111,1665:0,125,255:40,0 chr1 248112989 . A . PASS END=248113025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1566:0,102,255:40,0 chr1 248113026 . T A, 161.81 PASS DP=41;MQ=64.36;FractionInformativeReads=0.976 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,21,0:0,19,0:116:200,119,0,1453,119,1453:255,87,0:0,0:1.6181e+02,1.1646e+02,0.0000e+00,4.5000e+02,1.5123e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,23:0,0,20,20 chr1 248113027 . A . PASS END=248113039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1440:0,100,255:38,0 chr1 248113040 . A G, 153.70 PASS DP=37;MQ=63.71;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,19,0:0,18,0:108:191,111,0,1419,111,1419:255,111,0:0,0:1.5370e+02,1.0835e+02,0.0000e+00,4.5000e+02,1.4312e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,21:0,0,16,21 chr1 248113041 . G . PASS END=248113072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr1 248113073 . A . PASS END=248113077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr1 248113078 . A . PASS END=248113094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr1 248113095 . G . PASS END=248113098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 248128634 . A . PASS END=248129202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:91:41:0,91,1535:0,91,255:40,0 chr1 248129203 . C . PASS END=248129239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:43:0,94,1582:0,94,255:40,0 chr1 248129240 . G A, 181.50 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,22,0:0,23,0:132:219,135,0,1670,135,1670:255,138,0:0,0:1.8150e+02,1.3150e+02,0.0000e+00,4.5000e+02,1.6627e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,28:0,0,24,21 chr1 248129241 . T . PASS END=248129277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,105,1575:0,112,255:40,0 chr1 248129278 . C . PASS END=248129630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:37:0,90,1350:0,91,255:40,0 chr1 248129631 . C . PASS END=248129641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:33:0,75,1125:0,86,255:26,0 chr1 248185250 . A . PASS END=248185845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:85:45:0,85,1455:0,85,255:40,0 chr1 248185846 . T . PASS END=248185882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,118,1800:0,118,255:40,0 chr1 248185883 . G A, 48.15 PASS DP=52;MQ=220.15;MQRankSum=0.769;ReadPosRankSum=4.121;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,22,0:0.423,0.000:52:11,13,0:19,9,0:47:83,0,50,771,1013,1784:255,0,255:29,0:4.8152e+01,8.8272e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,7,15:13,17,8,14 chr1 248185884 . G . PASS END=248185920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:48:0,120,1800:0,125,255:40,0 chr1 248185921 . C . PASS END=248186165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:33:0,87,1286:0,92,255:40,0 chr1 248186166 . A . PASS END=248186166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr1 248186167 . T . PASS END=248186167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 248186168 . A . PASS END=248186169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,893:0,46,255:29,0 chr1 248186170 . C . PASS END=248186171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr1 248186172 . T . PASS END=248186172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr1 248186173 . C . PASS END=248186174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 248186175 . C . PASS END=248186188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr1 248201570 . A . PASS END=248202306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:94:43:0,94,1446:0,94,255:40,0 chr1 248202307 . A . PASS END=248202343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,120,255:40,0 chr1 248202344 . G C, 49.70 PASS DP=50;MQ=173.35;MQRankSum=-2.706;ReadPosRankSum=5.275;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,27,0:0.540,0.000:50:10,12,0:13,15,0:48:84,0,49,966,822,1787:255,0,255:22,0:4.9700e+01,7.1187e-05,5.2440e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,15,12,15:11,12,11,16 chr1 248202345 . T . PASS END=248202381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,104,1703:0,104,255:40,0 chr1 248202382 . G . PASS END=248202488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1155:0,80,255:40,0 chr1 248202489 . T . PASS END=248202490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1001:0,76,255:29,0 chr1 248202491 . T . PASS END=248202495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1048:0,90,255:30,0 chr1 248202496 . A . PASS END=248202497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr1 248202498 . T . PASS END=248202501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 248202502 . A . PASS END=248202508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr1 248223984 . A . PASS END=248224061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:42:0,96,1375:0,96,255:40,0 chr1 248224062 . T . PASS END=248224098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:69:0,120,1800:0,161,255:40,0 chr1 248224099 . T C, 48.42 PASS DP=74;MQ=126.38;MQRankSum=0.704;ReadPosRankSum=2.591;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,32,0:0.432,0.000:74:18,21,0:24,11,0:47:83,0,50,1116,1463,2579:255,0,255:39,0:4.8415e+01,8.4389e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,18,18,14:22,20,15,17 chr1 248224100 . T . PASS END=248224136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,157,255:40,0 chr1 248224137 . A . PASS END=248224178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:80:0,120,1800:0,152,255:40,0 chr1 248224179 . T . PASS END=248224215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,231,255:40,0 chr1 248224216 . C T, 47.20 PASS DP=86;MQ=105.12;MQRankSum=-4.871;ReadPosRankSum=4.889;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,43,0:0.500,0.000:86:25,23,0:18,20,0:45:82,0,47,1493,1534,3027:255,0,255:39,0:4.7200e+01,1.2270e-04,5.0350e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,26,23,20:19,24,25,18 chr1 248224217 . T . PASS END=248224293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:82:0,120,1800:0,228,255:40,0 chr1 248224294 . C T, 45.95 PASS DP=85;MQ=98.24;MQRankSum=-6.548;ReadPosRankSum=4.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,44,0:0.518,0.000:85:27,25,0:14,19,0:45:81,0,48,1499,1458,2957:255,0,255:33,0:4.5950e+01,1.4652e-04,5.0773e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,23,20,24:18,23,31,13 chr1 248224295 . G . PASS END=248224331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:74:0,120,1800:0,204,255:40,0 chr1 248224332 . A . PASS END=248224360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,142,255:40,0 chr1 248224361 . C . PASS END=248224397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,197,255:40,0 chr1 248224398 . A G, 39.10 PASS DP=71;MQ=78.76;MQRankSum=-6.781;ReadPosRankSum=5.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,30,0:0.423,0.000:71:20,16,0:21,14,0:39:74,0,46,1058,1417,2475:255,0,255:38,0:3.9102e+01,5.8454e-04,4.9351e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,23,14,16:21,20,12,18 chr1 248224399 . T . PASS END=248224435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,156,255:40,0 chr1 248224436 . C . PASS END=248224451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,142,255:40,0 chr1 248224452 . G . PASS END=248224488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,105,1450:0,107,255:40,0 chr1 248224489 . A G, 31.78 PASS DP=41;MQ=70.38;MQRankSum=-5.091;ReadPosRankSum=1.189;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,16,0:0.390,0.000:41:11,6,0:14,10,0:32:67,0,46,563,894,1457:255,0,255:21,0:3.1780e+01,2.9336e-03,4.9353e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,10,6:10,15,8,8 chr1 248224490 . A . PASS END=248224523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,99,1504:0,99,255:40,0 chr1 248224524 . C . PASS END=248224524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1467:0,74,255:38,0 chr1 248224525 . C . PASS END=248224568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,110,1590:0,110,255:40,0 chr1 248224569 . G T, 0.02 DRAGENSnpHardQUAL DP=56;MQ=86.31;MQRankSum=-2.285;ReadPosRankSum=1.755;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:48,7,0:0.127,0.000:55:20,5,0:28,2,0:23:12,0,47,242,1717,1959:95,0,255:40,0:2.3937e-02,2.2599e+01,7.2999e+01,2.6500e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:37,11,3,4:27,21,3,4 chr1 248224570 . G . PASS END=248224577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,152,255:40,0 chr1 248224578 . T C, 33.69 PASS DP=60;MQ=88.99;MQRankSum=-5.085;ReadPosRankSum=-0.270;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:41,19,0:0.317,0.000:60:21,7,0:20,12,0:34:68,0,44,168,168,168:255,0,255:40,0:3.3685e+01,1.9383e-03,4.7402e+01,1.6846e+02,2.0323e+02,1.7147e+02:0.00,34.77,37.78,34.77,69.54,37.78:27,14,16,3:17,24,10,9:248224578 chr1 248224579 . T . PASS END=248224585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr1 248224586 . C T, 33.69 PASS DP=59;MQ=89.25;MQRankSum=-5.037;ReadPosRankSum=0.641;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:40,19,0:0.322,0.000:59:21,7,0:19,12,0:34:68,0,44,168,168,168:255,0,255:39,0:3.3685e+01,1.9383e-03,4.7402e+01,1.6846e+02,2.0323e+02,1.7147e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,14,16,3:17,23,10,9:248224578 chr1 248224587 . A G, 33.69 PASS DP=59;MQ=89.25;MQRankSum=-5.037;ReadPosRankSum=0.852;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:40,19,0:0.322,0.000:59:21,7,0:19,12,0:34:68,0,44,168,168,168:255,0,255:39,0:3.3685e+01,1.9383e-03,4.7402e+01,1.6846e+02,2.0323e+02,1.7147e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,14,16,3:17,23,10,9:248224578 chr1 248224588 . C . PASS END=248224594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,180,255:40,0 chr1 248224595 . C . LowGQ END=248224595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,7:63:0:63:0,0,1868:82,0,255:40,0 chr1 248224596 . T . PASS END=248224617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,146,255:40,0 chr1 248224618 . C . PASS END=248224618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:25:60:0,25,1947:0,25,255:40,0 chr1 248224619 . T . PASS END=248224635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,132,255:40,0 chr1 248224636 . G . PASS END=248224716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:56:0,120,1800:0,150,255:40,0 chr1 248224717 . C . PASS END=248224753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,177,255:40,0 chr1 248224754 . T C, 45.17 PASS DP=59;MQ=80.86;MQRankSum=-4.283;ReadPosRankSum=4.526;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,29,0:0.492,0.000:59:19,13,0:11,16,0:44:80,0,47,1025,1057,2082:255,0,255:27,0:4.5174e+01,1.7732e-04,4.9800e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,7,22:14,16,15,14 chr1 248224755 . T . PASS END=248224791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,110,1800:0,110,255:40,0 chr1 248224792 . A . PASS END=248224886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:34:0,90,1288:0,92,255:40,0 chr1 248224887 . C . PASS END=248224887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:29,0 chr1 248224888 . G . PASS END=248224904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1036:0,83,255:30,0 chr1 248224905 . T . PASS END=248224905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr1 248224906 . G . PASS END=248224917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr1 248224918 . T . PASS END=248224918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr1 248224919 . G . PASS END=248224922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr1 248262678 . A . PASS END=248263129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:39:0,86,1332:0,86,255:40,0 chr1 248263130 . G . PASS END=248263130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1721:0,70,255:40,0 chr1 248263131 . T . PASS END=248263613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1178:0,93,255:40,0 chr1 248263614 . T . PASS END=248263616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 248308450 . A . PASS END=248309388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:81:35:0,81,1215:0,103,255:40,0 chr1 248343288 . A . PASS END=248343312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:34:0,82,1272:0,82,255:39,0 chr1 248343313 . A . PASS END=248343313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1136:0,78,255:35,0 chr1 248343314 . C . PASS END=248343314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:36,0 chr1 248343315 . T . PASS END=248343315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1404:0,62,255:34,0 chr1 248343316 . C . PASS END=248343319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,108,1620:0,110,255:38,0 chr1 248343320 . C . PASS END=248343320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1382:0,65,255:35,0 chr1 248343321 . T . PASS END=248343505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:40:0,81,1421:0,81,255:40,0 chr1 248343506 . C . PASS END=248343542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,234,255:40,0 chr1 248343543 . C T, 307.45 PASS DP=87;MQ=136.85;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,87,0:1.000,0.000:87:0,47,0:0,40,0:257:345,260,0,3238,260,3238:255,255,0:0,0:3.0745e+02,2.5745e+02,0.0000e+00,4.5000e+02,2.9222e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,49,38:0,0,43,44 chr1 248343544 . T . PASS END=248343580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:81:0,120,1800:0,191,255:40,0 chr1 248343581 . C . PASS END=248343907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1762:0,120,255:40,0 chr1 248343908 . T . PASS END=248343944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,136,255:40,0 chr1 248343945 . C G, 219.53 PASS DP=59;MQ=71.54;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,33,0:0,26,0:173:257,176,0,2189,176,2189:255,177,0:0,0:2.1953e+02,1.7318e+02,0.0000e+00,4.5000e+02,2.0795e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,30:0,0,31,28 chr1 248343946 . G . PASS END=248343989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,146,255:40,0 chr1 248343990 . T C, 245.29 PASS DP=67;MQ=84.07;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,36,0:0,31,0:199:283,202,0,2559,202,2559:255,202,0:0,0:2.4529e+02,1.9864e+02,0.0000e+00,4.5000e+02,2.3341e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,36:0,0,38,29 chr1 248343991 . G . PASS END=248344027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:65:0,120,1800:0,181,255:40,0 chr1 248344028 . G . PASS END=248344331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:67:0,120,1800:0,166,255:40,2 chr1 248366370 . A . PASS END=248366664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,154,255:40,0 chr1 248366665 . C . PASS END=248366701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,177,255:40,0 chr1 248366702 . G A, 47.64 PASS DP=68;MQ=161.12;MQRankSum=-5.567;ReadPosRankSum=4.457;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,30,0:0.448,0.000:67:19,15,0:18,15,0:47:82,0,50,1012,1314,2325:255,0,255:34,0:4.7641e+01,9.6556e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,20,11,19:21,16,14,16 chr1 248366703 . T . PASS END=248366739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,159,255:40,0 chr1 248366740 . C . PASS END=248367308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:88:35:0,88,1211:0,88,255:40,0 chr1 248402231 . A . PASS END=248402250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr1 248402251 . C . PASS END=248402251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 248402252 . T . PASS END=248402252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 248402253 . T . PASS END=248402261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:22,0 chr1 248402262 . T . PASS END=248402266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr1 248402267 . A . PASS END=248402291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,62,255:25,0 chr1 248402292 . G . PASS END=248402309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1149:0,82,255:34,0 chr1 248402310 . T . PASS END=248402310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1101:0,69,255:32,0 chr1 248402311 . T . PASS END=248402314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1250:0,86,255:34,0 chr1 248402315 . T . PASS END=248402315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr1 248402316 . C . PASS END=248402720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:35:0,98,1311:0,98,255:40,1 chr1 248402721 . T . PASS END=248402757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:47:0,95,1767:0,95,255:40,0 chr1 248402758 . C T, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.881;ReadPosRankSum=3.554;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,27,0:0.562,0.000:48:11,16,0:10,11,0:48:85,0,49,929,722,1651:255,0,255:19,0:5.0000e+01,7.3258e-05,5.1616e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,16,11:13,8,17,10 chr1 248402759 . T . PASS END=248402795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,120,255:40,0 chr1 248402796 . G . PASS END=248403064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1147:0,80,255:40,0 chr1 248403065 . A . PASS END=248403065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1190:0,66,255:30,0 chr1 248403066 . C . PASS END=248403117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1209:0,83,255:33,0 chr1 248403118 . A . PASS END=248403122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr1 248403123 . T . PASS END=248403159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,629:0,51,255:18,0 chr1 248403160 . A . PASS END=248403160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 248403161 . A . PASS END=248403166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 248436154 . T . PASS END=248436312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:47:0,120,1800:0,131,255:40,0 chr1 248436313 . A . LowGQ END=248436313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,12:101:0:101:0,0,2856:140,0,255:40,0 chr1 248436314 . T . PASS END=248436418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:83:0,120,1800:0,189,255:40,0 chr1 248436419 . T . PASS END=248436455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:60:0,120,1800:0,145,255:40,0 chr1 248436456 . C A, 3.43 DRAGENSnpHardQUAL DP=56;MQ=38.35;MQRankSum=-3.715;ReadPosRankSum=-0.069;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,13,0:0.236,0.000:55:16,10,0:26,3,0:3:36,0,44,456,1465,1921:255,0,255:39,0:3.4347e+00,2.6238e+00,4.9374e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,26,8,5:22,20,7,6 chr1 248436457 . G . PASS END=248436526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:43:0,93,1491:0,93,255:40,0 chr1 248436527 . A . LowGQ END=248436527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:0:42:0,0,1184:62,0,255:32,0 chr1 248436528 . T . PASS END=248436581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1316:0,87,255:39,0 chr1 248436582 . T . LowGQ END=248436582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:0:41:0,0,1174:10,0,255:35,0 chr1 248436583 . C . PASS END=248436610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:41:0,110,1551:0,110,255:40,0 chr1 248436611 . G A, 60.71 PASS DP=60;MQ=38.05;MQRankSum=3.561;ReadPosRankSum=1.698;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:9,51,0:0.850,0.000:60:4,26,0:5,25,0:18:98,21,0,198,198,198:255,0,169:9,0:6.0710e+01,1.7835e+01,7.2092e-02,1.9548e+02,2.3025e+02,1.9849e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,1,29,22:3,6,28,23 chr1 248436612 . C . PASS END=248436615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,177,255:40,0 chr1 248436616 . A G, 360.88 PASS DP=59;MQ=38.97;MQRankSum=-1.145;ReadPosRankSum=-0.323;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,58,0:0.983,0.000:59:0,30,0:1,28,0:318:399,321,0,499,499,499:255,139,0:1,0:3.6088e+02,3.1801e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,38,20:1,0,26,32 chr1 248436617 . C . PASS END=248436637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,164,255:40,0 chr1 248436638 . A G, 33.33 PASS DP=91;MQ=39.89;MQRankSum=-5.616;ReadPosRankSum=0.012;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,45,0:0.495,0.000:91:24,16,0:22,29,0:33:68,0,43,1565,1554,3119:255,0,255:40,0:3.3331e+01,2.1232e-03,4.6127e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,22,36,9:26,20,19,26 chr1 248436639 . C . PASS END=248436675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:92:0,120,1800:0,253,255:40,0 chr1 248436676 . C . PASS END=248436762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:104:0,120,1800:0,255,255:40,0 chr1 248436763 . A . PASS END=248436804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:130,0:130:99:123:0,120,1800:0,255,255:40,0 chr1 248436805 . T G, 1726.36 PASS DP=133;MQ=33.25;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,133,0:1.000,0.000:133:0,60,0:0,73,0:450:1764,1686,0,1864,1864,1864:255,255,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,64,69:0,0,73,60:248436805 chr1 248436806 . G . PASS END=248436808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,1:130:99:124:0,120,1800:0,255,255:40,0 chr1 248436809 . G A, 33.05 PASS DP=125;MQ=32.09;MQRankSum=-5.311;ReadPosRankSum=7.723;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:80,45,0:0.360,0.000:125:41,15,0:39,30,0:33:68,0,40,168,168,168:255,0,255:40,0:3.3046e+01,2.3542e-03,4.3377e+01,1.6782e+02,2.0259e+02,1.7083e+02:0.00,34.77,37.78,34.77,69.54,37.78:44,36,21,24:47,33,23,22:248436805 chr1 248436810 . G . PASS END=248436810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,0:125:99:125:0,120,1800:0,255,255:40,0 chr1 248436811 . G C, 33.05 PASS DP=125;MQ=32.09;MQRankSum=-5.311;ReadPosRankSum=7.605;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:80,45,0:0.360,0.000:125:41,15,0:39,30,0:33:68,0,40,168,168,168:255,0,255:40,0:3.3046e+01,2.3542e-03,4.3377e+01,1.6782e+02,2.0259e+02,1.7083e+02:0.00,34.77,37.78,34.77,69.54,37.78:44,36,21,24:47,33,23,22:248436805 chr1 248436812 . A . PASS END=248436854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:117:0,120,1800:0,255,255:40,0 chr1 248436855 . T . PASS END=248436874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,1:115:99:110:0,120,1800:0,255,255:40,0 chr1 248436875 . G . PASS END=248436911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,1:109:99:99:0,120,1800:0,255,255:40,0 chr1 248436912 . T . LowGQ END=248436912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,15:103:0:103:0,0,2792:255,0,255:40,0 chr1 248436913 . G . PASS END=248436949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:103:0,120,1800:0,255,255:40,0 chr1 248436950 . G . PASS END=248436971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:92:0,120,1800:0,128,255:40,0 chr1 248436972 . A . LowGQ END=248436972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,8:92:0:92:0,0,2819:26,0,255:40,0 chr1 248436973 . G . PASS END=248437116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:56:0,120,1800:0,139,255:40,0 chr1 248457918 . T . PASS END=248457919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr1 248457920 . A . PASS END=248457920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr1 248457921 . T . PASS END=248457921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:29,0 chr1 248457922 . C . PASS END=248457935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1318:0,92,255:36,0 chr1 248457936 . C . PASS END=248457937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1244:0,72,255:35,0 chr1 248457938 . C . PASS END=248457941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1305:0,95,255:37,0 chr1 248457942 . T . PASS END=248457978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,102,1376:0,102,255:40,0 chr1 248457979 . C A, 179.43 PASS DP=46;MQ=126.28;FractionInformativeReads=0.957 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,21,0:0,23,0:129:217,132,0,1702,132,1702:255,138,0:0,0:1.7943e+02,1.2943e+02,0.0000e+00,4.5000e+02,1.6420e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,22:0,0,21,23 chr1 248457980 . G . PASS END=248458016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,126,255:40,0 chr1 248458017 . G . PASS END=248458304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:58:0,120,1800:0,152,255:40,2 chr1 248458305 . G . PASS END=248458350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:102:0,120,1800:0,255,255:40,0 chr1 248458351 . CAGA C, 41.09 PASS DP=105;MQ=45.61;MQRankSum=0.765;ReadPosRankSum=0.765;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:51,49,0:0.490,0.000:100:19,24,0:32,25,0:40:70,0,43,2037,2717,4754:255,0,255:40,61:4.1094e+01,4.4992e-04,4.5875e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,29.00,32.00,34.77,63.77,37.77:20,31,21,28:32,19,26,23 chr1 248458352 . A . LowGQ END=248458355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:61,61:122:0:102:0,0,0:255,0,255:40,61 chr1 248458356 . G . PASS END=248458434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:66:0,120,1800:0,172,255:40,1 chr1 248458435 . A G, 41.00 PASS DP=64;MQ=44.76;MQRankSum=0.917;ReadPosRankSum=0.580;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,35,0:0.547,0.000:64:11,19,0:18,16,0:40:76,0,42,1252,1037,2289:255,0,255:29,0:4.1000e+01,4.7866e-04,4.5113e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,19,11,24:16,13,13,22 chr1 248458436 . G . PASS END=248458472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,138,255:40,0 chr1 248458473 . C . PASS END=248458527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:39:0,93,1395:0,116,255:40,0 chr1 248458528 . T . PASS END=248458550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr1 248458551 . G . PASS END=248458568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:24,0 chr1 248458569 . T G, 36.82 PASS DP=25;MQ=35.70;MQRankSum=-1.304;ReadPosRankSum=4.133;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:15,10,0:0.400,0.000:25:10,6,0:5,4,0:36:72,0,38,172,172,172:255,0,255:14,0:3.6815e+01,1.2116e-03,4.1501e+01,1.7159e+02,2.0636e+02,1.7460e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,7,4,6:9,6,2,8:248458569 chr1 248458570 . G . PASS END=248458570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr1 248458571 . T A, 41.50 PASS DP=25;MQ=35.70;MQRankSum=2.247;ReadPosRankSum=3.023;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:10,15,0:0.600,0.000:25:6,10,0:4,5,0:36:76,0,34,176,176,176:255,0,255:10,0:4.1501e+01,1.2116e-03,3.6815e+01,1.7627e+02,2.1104e+02,1.7928e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,6,8,7:2,8,9,6:248458569 chr1 248458572 . G . PASS END=248458590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,922:0,72,255:25,0 chr1 248458591 . A . PASS END=248458611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr1 248458612 . A . PASS END=248458612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,536:0,37,255:16,0 chr1 248458613 . T . PASS END=248458637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,637:0,44,255:17,0 chr1 248458638 . A . PASS END=248458638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr1 248458639 . G . PASS END=248458646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:18,0 chr1 248458647 . T . PASS END=248458650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,619:0,60,255:20,0 chr1 248458651 . G . PASS END=248458675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,668:0,44,255:19,0 chr1 248458676 . T C, 98.72 PASS DP=19;MQ=82.88;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,9,0:0,9,0:51:136,54,0,682,54,682:255,57,0:0,0:9.8719e+01,5.1169e+01,3.3134e-05,4.5000e+02,8.5939e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,5:0,0,6,12 chr1 248458677 . G . PASS END=248458677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr1 248458678 . T . PASS END=248458680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr1 248458681 . A . PASS END=248458681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr1 248458682 . T . PASS END=248458688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 248458689 . A G, 117.33 PASS DP=24;MQ=93.07;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,12,0:0,12,0:69:155,72,0,913,72,913:255,72,0:0,0:1.1733e+02,6.9227e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,9:0,0,9,15 chr1 248458690 . A . PASS END=248458690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:20,0 chr1 248458691 . G . PASS END=248458691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 248458692 . T . PASS END=248458692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,648:0,52,255:21,0 chr1 248458693 . T . PASS END=248458694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 248458695 . G . PASS END=248458695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr1 248458696 . C . PASS END=248458704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr1 248458705 . A . PASS END=248458705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr1 248458706 . A . PASS END=248458706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr1 248458707 . G . PASS END=248458716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 248458717 . C G, 141.15 PASS DP=32;MQ=117.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,16,0:0,16,0:93:179,96,0,1203,96,1203:255,96,0:0,0:1.4115e+02,9.2848e+01,0.0000e+00,4.5000e+02,1.2762e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,11:0,0,11,21 chr1 248458718 . T . PASS END=248458729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1141:0,82,255:32,0 chr1 248458730 . G . PASS END=248458730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr1 248458731 . G . PASS END=248458754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1172:0,80,255:34,0 chr1 248458755 . G . PASS END=248458785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:34:0,96,1242:0,102,255:40,0 chr1 248458786 . G . LowGQ END=248458786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:0:46:0,0,1443:17,0,255:38,0 chr1 248458787 . T . PASS END=248458787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr1 248458788 . G . LowGQ END=248458790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:0:50:0,0,1480:52,0,255:40,0 chr1 248458791 . C . PASS END=248458795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr1 248458796 . G . LowGQ END=248458796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:0:51:0,0,1421:79,0,255:40,0 chr1 248458797 . C . PASS END=248458880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,120,255:40,0 chr1 248486932 . T . PASS END=248486950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,117,1759:0,117,255:40,0 chr1 248486951 . T . PASS END=248487262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:50:0,120,1800:0,124,255:40,0 chr1 248487263 . C . PASS END=248487299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,173,255:40,0 chr1 248487300 . C T, 46.05 PASS DP=84;MQ=106.79;MQRankSum=-6.284;ReadPosRankSum=5.409;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,43,0:0.518,0.000:83:23,24,0:17,19,0:45:81,0,48,1498,1418,2916:255,0,255:34,0:4.6050e+01,1.4315e-04,5.0888e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,17,26,17:26,14,27,16 chr1 248487301 . A . PASS END=248487337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:83:0,120,1800:0,216,255:40,0 chr1 248487338 . C A, 45.80 PASS DP=92;MQ=104.59;MQRankSum=-7.691;ReadPosRankSum=3.739;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,51,0:0.554,0.000:92:23,27,0:18,24,0:44:81,0,47,1688,1446,3134:255,0,255:40,0:4.5800e+01,1.6231e-04,4.9542e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,18,22,29:25,16,26,25 chr1 248487339 . A . PASS END=248487375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:90:0,120,1800:0,209,255:40,0 chr1 248487376 . G . PASS END=248487600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:70:0,120,1800:0,187,255:40,0 chr1 248487601 . C . PASS END=248487637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,184,255:40,0 chr1 248487638 . A G, 47.27 PASS DP=82;MQ=134.56;MQRankSum=-0.572;ReadPosRankSum=4.329;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,38,0:0.463,0.000:82:19,22,0:25,16,0:46:82,0,48,1272,1512,2785:255,0,255:39,0:4.7273e+01,1.1338e-04,5.1300e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,18,16,22:19,25,16,22 chr1 248487639 . C . PASS END=248487675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,231,255:40,0 chr1 248487676 . T . PASS END=248487730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:84:0,120,1800:0,242,255:40,0 chr1 248487731 . A . PASS END=248487767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:86:0,120,1800:0,218,255:40,0 chr1 248487768 . A G, 49.34 PASS DP=87;MQ=135.71;MQRankSum=-0.410;ReadPosRankSum=2.694;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,39,0:0.459,0.000:85:22,18,0:24,21,0:47:84,0,49,1299,1604,2904:255,0,255:40,0:4.9340e+01,7.7141e-05,5.2100e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,24,20,19:24,22,15,24 chr1 248487769 . G . PASS END=248487805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,211,255:40,0 chr1 248487806 . G . PASS END=248487870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:50:0,120,1800:0,149,255:40,0 chr1 248512077 . A . PASS END=248512093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,138,255:40,0 chr1 248512094 . C T, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.172;ReadPosRankSum=2.363;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,27,0:0.519,0.000:52:11,18,0:14,9,0:48:85,0,50,958,886,1844:255,0,255:25,0:5.0000e+01,6.5751e-05,5.2875e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,7,22,5:12,13,15,12 chr1 248512095 . G . PASS END=248512131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,142,255:40,0 chr1 248512132 . G . PASS END=248512460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,136,255:40,0 chr1 248512461 . C . PASS END=248512497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,158,255:40,0 chr1 248512498 . A G, 49.95 PASS DP=59;MQ=250.00;MQRankSum=6.588;ReadPosRankSum=4.207;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,29,0:0.492,0.000:59:20,13,0:10,16,0:48:85,0,50,977,1073,2050:255,0,255:27,0:4.9954e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,12,17:14,16,16,13 chr1 248512499 . G . PASS END=248512535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,163,255:40,0 chr1 248512536 . G . PASS END=248512599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,130,255:40,0 chr1 248512600 . T . PASS END=248512636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,153,255:40,0 chr1 248512637 . C T, 50.00 PASS DP=67;MQ=250.00;MQRankSum=7.023;ReadPosRankSum=2.216;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,35,0:0.522,0.000:67:20,20,0:12,15,0:48:85,0,50,1157,1112,2269:255,0,255:30,0:5.0000e+01,6.5751e-05,5.2870e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,13,19,16:21,11,10,25 chr1 248512638 . T . PASS END=248512674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,161,255:40,0 chr1 248512675 . C . PASS END=248512711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,167,255:40,0 chr1 248512712 . C . PASS END=248512748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:61:0,120,1800:0,179,255:40,0 chr1 248512749 . G A, 50.00 PASS DP=62;MQ=249.94;MQRankSum=6.334;ReadPosRankSum=3.851;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:29,33,0:0.532,0.000:62:17,17,0:12,16,0:48:85,0,50,1178,1029,2207:255,0,255:29,0:5.0000e+01,6.7045e-05,5.2648e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,17,10,23:10,19,12,21:248512749 chr1 248512750 . G . PASS END=248512766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:63:0,115,1800:0,115,255:40,0 chr1 248512767 . G T, 50.00 PASS DP=66;MQ=249.94;MQRankSum=6.561;ReadPosRankSum=2.440;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,36,0:0.545,0.000:66:17,16,0:13,20,0:48:85,0,49,1278,1073,2351:255,0,255:27,0:5.0000e+01,6.8857e-05,5.2314e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,15,21:12,18,17,19:248512749 chr1 248512768 . A . PASS END=248512804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,167,255:40,0 chr1 248512805 . C . PASS END=248512985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,111,1800:0,111,255:40,0 chr1 248512986 . A . PASS END=248513015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,198,255:40,0 chr1 248524883 . A . PASS END=248524936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:29:0,83,1070:0,83,255:40,0 chr1 248524937 . A . PASS END=248524973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,105,1487:0,105,255:40,0 chr1 248524974 . A G, 50.00 PASS DP=50;MQ=202.16;MQRankSum=-3.287;ReadPosRankSum=3.665;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,32,0:0.653,0.000:49:6,17,0:11,15,0:44:85,0,42,1116,608,1724:255,0,255:17,0:5.0000e+01,1.7888e-04,4.5060e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,20,12:10,7,19,13 chr1 248524975 . T . PASS END=248525052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,115,1800:0,115,255:40,0 chr1 248525053 . A T, 50.00 PASS DP=59;MQ=151.66;MQRankSum=-3.629;ReadPosRankSum=0.462;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,37,0:0.627,0.000:59:11,17,0:11,20,0:44:85,0,42,185,185,185:255,0,255:19,0:5.0000e+01,1.6826e-04,4.5413e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,8,22,15:11,11,18,19:248525053 chr1 248525054 . C . PASS END=248525059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:59:0,120,1800:0,167,255:40,0 chr1 248525060 . T A, 50.00 PASS DP=56;MQ=142.43;MQRankSum=-3.893;ReadPosRankSum=0.322;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,35,0:0.625,0.000:56:11,15,0:10,20,0:46:85,0,44,1233,722,1955:255,0,255:20,0:5.0000e+01,1.2244e-04,4.7407e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,8,21,14:11,10,17,18:248525053 chr1 248525061 . G . PASS END=248525070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,132,255:40,0 chr1 248525071 . T C, 49.25 PASS DP=59;MQ=123.71;MQRankSum=-4.415;ReadPosRankSum=0.601;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,36,0:0.621,0.000:58:13,16,0:9,20,0:45:84,0,45,1282,742,2024:255,0,255:22,0:4.9250e+01,1.2374e-04,4.7795e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,21,15:12,10,21,15:248525053 chr1 248525072 . T . PASS END=248525099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,160,255:40,0 chr1 248525100 . G . LowGQ END=248525100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,6:62:0:62:0,0,1886:46,0,255:40,0 chr1 248525101 . A . PASS END=248525134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,180,255:40,0 chr1 248525135 . G A, 15.09 PASS DP=78;MQ=84.49;MQRankSum=-4.349;ReadPosRankSum=0.254;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:63,15,0:0.192,0.000:78:36,7,0:27,8,0:15:50,0,47,150,150,150:255,0,255:40,0:1.5090e+01,1.3669e-01,4.9837e+01,1.4986e+02,1.8463e+02,1.5287e+02:0.00,34.77,37.78,34.77,69.54,37.78:32,31,7,8:29,34,7,8 chr1 248525136 . C . PASS END=248525137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:78:0,120,1800:0,196,255:40,0 chr1 248525138 . C T, 15.09 PASS DP=77;MQ=84.16;MQRankSum=-4.281;ReadPosRankSum=2.023;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:61,15,0:0.197,0.000:76:34,7,0:27,8,0:15:50,0,47,150,150,150:255,0,255:40,0:1.5090e+01,1.3669e-01,4.9837e+01,1.4986e+02,1.8463e+02,1.5287e+02:0.00,34.77,37.78,34.77,69.54,37.78:32,29,7,8:29,32,7,8 chr1 248525139 . A . PASS END=248525145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,234,255:40,0 chr1 248525146 . C T, 39.16 PASS DP=81;MQ=84.53;MQRankSum=-2.264;ReadPosRankSum=2.675;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:51,30,0:0.370,0.000:81:26,18,0:25,12,0:39:74,0,50,1036,1794,2830:255,0,255:40,0:3.9158e+01,5.5063e-04,5.2701e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:34,17,13,17:31,20,17,13 chr1 248525147 . A . PASS END=248525185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:78:0,120,1800:0,188,255:40,0 chr1 248525186 . G . PASS END=248525242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,182,255:40,0 chr1 248525243 . G . PASS END=248525284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,114,1710:0,122,255:40,0 chr1 248525285 . T C, 37.71 PASS DP=51;MQ=111.26;MQRankSum=-5.667;ReadPosRankSum=-0.030;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:33,18,0:0.353,0.000:51:19,9,0:14,9,0:37:72,0,47,172,172,172:255,0,255:31,0:3.7707e+01,7.8416e-04,4.9601e+01,1.7248e+02,2.0725e+02,1.7549e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,19,9,9:22,11,10,8:248525285 chr1 248525286 . T . PASS END=248525289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,108,1620:0,156,255:37,0 chr1 248525290 . C T, 37.71 PASS DP=50;MQ=112.22;MQRankSum=-5.689;ReadPosRankSum=-0.374;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:32,18,0:0.360,0.000:50:19,9,0:13,9,0:37:72,0,47,172,172,172:255,0,255:30,0:3.7707e+01,7.8416e-04,4.9601e+01,1.7248e+02,2.0725e+02,1.7549e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,17,9,9:20,12,10,8:248525285 chr1 248525291 . G C, 37.71 PASS DP=49;MQ=113.31;MQRankSum=-5.577;ReadPosRankSum=-0.053;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:32,17,0:0.347,0.000:49:19,8,0:13,9,0:37:72,0,47,172,172,172:255,0,255:30,0:3.7707e+01,7.8416e-04,4.9601e+01,1.7248e+02,2.0725e+02,1.7549e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,17,8,9:20,12,9,8:248525285 chr1 248525292 . T . PASS END=248525322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:48:0,84,1350:0,84,255:37,0 chr1 248525323 . A . LowGQ END=248525325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:0:52:0,0,1493:15,0,255:30,0 chr1 248525326 . C . PASS END=248525326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,105,1575:0,156,255:35,0 chr1 248525327 . A . LowGQ END=248525327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:0:52:0,0,1576:30,0,255:30,0 chr1 248525328 . C CTA, 47.16 PASS DP=53;MQ=119.80;MQRankSum=-3.385;ReadPosRankSum=-1.182;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:31,22,0:0.415,0.000:53:19,14,0:12,8,0:45:77,0,47,177,177,177:255,0,255:30,20:4.7158e+01,1.3124e-04,4.9600e+01,1.8193e+02,2.1193e+02,1.8494e+02:0.00,30.00,33.01,34.77,64.77,37.78:10,21,10,12:16,15,10,12:248525328 chr1 248525329 . C . LowGQ END=248525329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,15:54:0:54:0,0,930:255,0,255:40,0 chr1 248525330 . A G, 47.16 PASS DP=53;MQ=119.80;MQRankSum=-3.385;ReadPosRankSum=-0.930;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:31,22,0:0.415,0.000:53:19,14,0:12,8,0:45:82,0,47,182,182,182:255,0,255:29,0:4.7158e+01,1.3124e-04,4.9600e+01,1.8193e+02,2.1670e+02,1.8494e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,21,10,12:16,15,10,12:248525328 chr1 248525331 . T . PASS END=248525381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:41:0,82,1439:0,82,255:40,0 chr1 248525382 . T . PASS END=248525593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:38:0,87,1350:0,87,255:40,0 chr1 248525594 . A . PASS END=248525595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:43:0,81,1215:0,129,255:27,0 chr1 248525596 . G . PASS END=248525596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:75:43:0,75,1125:0,129,255:25,0 chr1 248525597 . C . PASS END=248525599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:45:0,84,1260:0,122,255:28,0 chr1 248525600 . C . PASS END=248525608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:60:43:0,60,900:0,96,255:26,0 chr1 248525609 . G . PASS END=248525625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:51:38:0,51,765:0,95,255:19,0 chr1 248525626 . C . PASS END=248525630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:60:40:0,60,900:0,120,255:20,0 chr1 248525631 . A . PASS END=248525631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:57:42:0,57,855:0,126,255:19,0 chr1 248525632 . T . PASS END=248525637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:60:42:0,60,900:0,74,255:20,1 chr1 248525638 . CA C, 49.85 PASS DP=44;MQ=145.16;MQRankSum=-0.483;ReadPosRankSum=-0.978;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:20,24,0:0.545,0.000:44:8,14,0:12,10,0:47:80,0,47,180,180,180:255,0,255:19,31:4.9850e+01,8.8790e-05,4.9968e+01,1.8462e+02,2.1462e+02,1.8763e+02:0.00,30.00,33.01,34.77,64.77,37.78:10,10,15,9:10,10,9,15:248525638 chr1 248525639 . A . LowGQ END=248525640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:20,31:51:0:45:0,0,0:255,0,255:40,30 chr1 248525641 . C . PASS END=248525646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,121,255:40,0 chr1 248525647 . C A, 49.97 PASS DP=46;MQ=142.03;MQRankSum=-0.353;ReadPosRankSum=0.353;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:24,21,0:0.467,0.000:45:14,9,0:10,12,0:47:85,0,47,185,185,185:255,0,255:24,0:4.9968e+01,8.8790e-05,4.9850e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,9,11,10:9,15,11,10:248525638 chr1 248525648 . A . PASS END=248525649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr1 248525650 . C T, 49.97 PASS DP=47;MQ=140.89;MQRankSum=-0.125;ReadPosRankSum=-0.330;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:24,21,0:0.467,0.000:45:14,7,0:10,14,0:47:85,0,47,185,185,185:255,0,255:24,0:4.9968e+01,8.8790e-05,4.9850e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,9,11,10:9,15,11,10:248525638 chr1 248525651 . A . PASS END=248525656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,132,255:40,0 chr1 248525657 . G A, 49.42 PASS DP=44;MQ=132.80;MQRankSum=-1.473;ReadPosRankSum=0.577;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:24,20,0:0.455,0.000:44:14,7,0:10,13,0:48:84,0,50,705,792,1497:255,0,255:24,0:4.9416e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,8,10,10:12,12,9,11:248525638 chr1 248525658 . G . PASS END=248525697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,119,1635:0,119,255:40,0 chr1 248525698 . C . PASS END=248525742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,110,1800:0,110,255:40,0 chr1 248525743 . C . PASS END=248525779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,158,255:40,0 chr1 248525780 . C T, 47.27 PASS DP=73;MQ=114.91;MQRankSum=0.443;ReadPosRankSum=1.889;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,30,0:0.411,0.000:73:27,15,0:16,15,0:46:82,0,50,1031,1456,2487:255,0,255:39,0:4.7273e+01,1.0329e-04,5.2950e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,18,21,9:23,20,10,20 chr1 248525781 . C . PASS END=248525817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,169,255:40,0 chr1 248525818 . C . PASS END=248525929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:53:0,117,1755:0,159,255:40,0 chr1 248550910 . A . PASS END=248550920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,993:0,84,255:28,0 chr1 248550921 . C . PASS END=248550921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,947:0,53,255:27,0 chr1 248550922 . A . PASS END=248550969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1050:0,84,255:40,0 chr1 248550970 . A G, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=1.230;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:8,9,0:16,16,0:47:85,0,47,185,185,185:255,0,255:23,0:5.0000e+01,8.7237e-05,4.9964e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,8,13,12:8,16,13,12 chr1 248550971 . A . PASS END=248550975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr1 248550976 . T G, 853.66 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,17,0:0,33,0:450:891,807,0,991,991,991:255,150,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,30,20:0,0,21,29 chr1 248550977 . G . PASS END=248551016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,106,1745:0,106,255:40,0 chr1 248551017 . C . PASS END=248551165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:40:0,96,1398:0,96,255:40,0 chr1 248551166 . T . PASS END=248551202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:42:0,90,1350:0,99,255:40,0 chr1 248551203 . T C, 49.78 PASS DP=38;MQ=247.92;MQRankSum=5.248;ReadPosRankSum=2.032;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,18,0:0.474,0.000:38:10,6,0:10,12,0:48:85,0,50,644,689,1332:255,0,255:17,0:4.9776e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,14,7,11:8,12,9,9 chr1 248551204 . G . PASS END=248551240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1134:0,83,255:32,0 chr1 248551241 . A . PASS END=248551261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:31,0 chr1 248551262 . T . PASS END=248551273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,77,255:24,0 chr1 248551274 . G . PASS END=248551274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr1 248551275 . C . PASS END=248551279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr1 248551280 . T . PASS END=248551291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr1 248551292 . A . PASS END=248551298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr1 248551299 . G . PASS END=248551300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr1 248551301 . G . PASS END=248551349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,978:0,65,255:26,0 chr1 248551350 . C . PASS END=248551369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:29,0 chr1 248551370 . T . PASS END=248551370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr1 248551371 . G . PASS END=248551374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr1 248551375 . A . PASS END=248551375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:27,0 chr1 248551376 . G . PASS END=248551388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:31,0 chr1 248551389 . C . PASS END=248551389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr1 248551390 . C . PASS END=248551444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1155:0,80,255:38,0 chr1 248551445 . G . PASS END=248551446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:32,0 chr1 248551447 . G . PASS END=248551453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1311:0,95,255:34,0 chr1 248551454 . C . PASS END=248551454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1302:0,56,255:32,0 chr1 248551455 . C . PASS END=248551455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr1 248551456 . A . PASS END=248551456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1205:0,78,255:31,0 chr1 248551457 . C . PASS END=248551468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:88:35:0,88,1136:0,88,255:33,0 chr1 248551469 . T . PASS END=248551469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1155:0,41,255:27,0 chr1 248551470 . G . PASS END=248551471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 248551472 . C . PASS END=248551472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:30,0 chr1 248551473 . C . PASS END=248551475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1225:0,86,255:31,0 chr1 248551476 . T . PASS END=248551476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr1 248551477 . G . PASS END=248551488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1225:0,89,255:33,0 chr1 248551489 . A . PASS END=248551489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:29,0 chr1 248551490 . C . PASS END=248551491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1264:0,92,255:34,0 chr1 248551492 . T . PASS END=248551492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:32,0 chr1 248551493 . A . PASS END=248551501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1329:0,83,255:37,0 chr1 248551502 . T . PASS END=248551502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr1 248551503 . G . PASS END=248551522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1189:0,81,255:40,0 chr1 248551523 . C . PASS END=248551528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1519:0,110,255:40,0 chr1 248551529 . T . PASS END=248551529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1435:0,79,255:38,0 chr1 248551530 . G . PASS END=248551559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:42:0,90,1446:0,90,255:40,0 chr1 248551560 . C T, 50.00 PASS DP=45;MQ=247.47;MQRankSum=5.152;ReadPosRankSum=3.345;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,22,0:0.500,0.000:44:14,9,0:8,13,0:48:85,0,50,762,746,1508:255,0,255:21,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,9,13:14,8,8,14 chr1 248551561 . T . PASS END=248551635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:89:40:0,89,1346:0,89,255:40,0 chr1 248551636 . T G, 49.96 PASS DP=52;MQ=250.00;MQRankSum=6.114;ReadPosRankSum=1.498;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,25,0:0.490,0.000:51:12,13,0:14,12,0:48:85,0,50,885,901,1786:255,0,255:26,0:4.9964e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,16,9:13,13,18,7 chr1 248551637 . C . PASS END=248551673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,129,255:40,0 chr1 248551674 . C . PASS END=248551814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:98:37:0,98,1386:0,98,255:40,0 chr1 248551815 . G . PASS END=248551815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:33,0 chr1 248551816 . A . PASS END=248551816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1303:0,95,255:34,0 chr1 248551817 . G . PASS END=248551818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1244:0,72,255:31,0 chr1 248551819 . G . PASS END=248551819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr1 248551820 . T . PASS END=248551820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:27,0 chr1 248551821 . T . PASS END=248551823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,94,255:28,0 chr1 248551824 . G . PASS END=248551824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:27,0 chr1 248551825 . G . PASS END=248551834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:29,0 chr1 248551835 . A . PASS END=248551835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:26,0 chr1 248551836 . G . PASS END=248551836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:26,0 chr1 248569296 . A . PASS END=248569321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,194,255:40,0 chr1 248569322 . T . PASS END=248569329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:84:0,120,1800:0,218,255:40,0 chr1 248569330 . T . PASS END=248569368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,176,255:40,0 chr1 248569369 . A G, 49.69 PASS DP=94;MQ=250.00;MQRankSum=8.331;ReadPosRankSum=2.800;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,44,0:0.468,0.000:94:29,27,0:21,17,0:48:84,0,50,1545,1677,3222:255,0,255:40,0:4.9688e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,33,19,25:22,28,18,26 chr1 248569370 . T . PASS END=248569406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,2:97:99:92:0,120,1800:0,221,255:40,0 chr1 248569407 . A . PASS END=248569531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,162,255:40,0 chr1 248569532 . C . PASS END=248569532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:75:63:0,75,1872:0,75,255:40,0 chr1 248569533 . A . PASS END=248570334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:87:37:0,87,1349:0,87,255:40,0 chr1 248570335 . T . PASS END=248570335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:35,0 chr1 248570336 . G . PASS END=248570363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,91,255:36,0 chr1 248570364 . A . PASS END=248570380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:24:0,66,990:0,72,255:25,0 chr1 248570381 . A . PASS END=248570385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,790:0,42,255:20,0 chr1 248570386 . T . PASS END=248570386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:17,0 chr1 248570387 . G . PASS END=248570402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:20:0,41,630:0,41,255:19,0 chr1 248570403 . T . PASS END=248570404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr1 248570405 . A . PASS END=248570405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr1 248604418 . A . PASS END=248604451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,225,255:40,0 chr1 248604452 . A G, 45.45 PASS DP=86;MQ=76.81;MQRankSum=-2.989;ReadPosRankSum=0.231;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:32,53,0:0.624,0.000:85:14,21,0:18,32,0:42:80,0,42,180,180,180:255,0,255:28,0:4.5450e+01,2.6612e-04,4.4847e+01,1.8022e+02,2.1499e+02,1.8323e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,16,25,28:16,16,21,32:248604452 chr1 248604453 . T . PASS END=248604464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:85:0,120,1800:0,203,255:40,0 chr1 248604465 . C T, 45.45 PASS DP=83;MQ=76.32;MQRankSum=-3.156;ReadPosRankSum=-1.482;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:31,51,0:0.622,0.000:82:13,21,0:18,30,0:42:80,0,42,180,180,180:255,0,255:24,0:4.5450e+01,2.6612e-04,4.4847e+01,1.8022e+02,2.1499e+02,1.8323e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,16,23,28:15,16,21,30:248604452 chr1 248604466 . G . PASS END=248604504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:37:0,102,1530:0,110,255:40,0 chr1 248604505 . T . PASS END=248604511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,91,255:29,0 chr1 248604512 . C . PASS END=248604518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,95,255:26,0 chr1 248604519 . A . PASS END=248604530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:42:33:0,42,630:0,99,255:19,0 chr1 248604531 . T . PASS END=248604534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:33:30:0,33,495:0,73,255:13,0 chr1 248604535 . T . PASS END=248604536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:27:31:0,27,405:0,77,255:9,0 chr1 248604537 . A . PASS END=248604538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:30:29:0,30,450:0,87,255:10,0 chr1 248604539 . C . PASS END=248604541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:21:30:0,21,315:0,74,255:8,0 chr1 248604542 . C T, 6.67 DRAGENSnpHardQUAL DP=29;MQ=46.16;MQRankSum=-1.656;ReadPosRankSum=-0.790;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,7,0:0.241,0.000:29:11,3,0:11,4,0:7:40,0,45,250,750,1000:184,0,255:7,0:6.6685e+00,1.0533e+00,4.8803e+01,2.5134e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,17,1,6:10,12,5,2 chr1 248604543 . G . PASS END=248604547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:15:28:0,15,225:0,84,255:6,0 chr1 248604548 . T . LowGQ END=248604558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:27,1:28:0:27:0,0,0:0,42,255:3,0 chr1 248604559 . T TTC, 126.00 PASS DP=29;MQ=42.66;FractionInformativeReads=0.966 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,10,0:0,18,0:81:158,84,0,1064,84,1064:255,0,107:0,24:1.2600e+02,8.1254e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,4,24:0,0,16,12 chr1 248604560 . T . LowGQ END=248604560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,21:28:0:28:0,0,0:255,0,187:24,0 chr1 248604561 . C . PASS END=248604562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,86,255:25,0 chr1 248604563 . T . LowGQ END=248604563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:29:0,0,861:29,0,255:26,0 chr1 248604564 . T . PASS END=248604564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 248604565 . G . PASS END=248604565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,969:0,18,255:26,0 chr1 248604566 . C . PASS END=248604571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr1 248604572 . T . PASS END=248604573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 248604574 . C . PASS END=248604613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1225:0,86,255:33,0 chr1 248604614 . A T, 38.00 PASS DP=33;MQ=27.34;MQRankSum=1.351;ReadPosRankSum=0.054;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,17,0:0.515,0.000:33:11,5,0:5,12,0:37:73,0,39,579,556,1135:255,0,255:15,0:3.8001e+01,9.4416e-04,4.2293e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,10,7:12,4,8,9 chr1 248604615 . G . PASS END=248604622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:29,0 chr1 248604623 . T . PASS END=248604623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 248604624 . C . PASS END=248604636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:30,0 chr1 248604637 . T . PASS END=248604637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:28,0 chr1 248604638 . C . PASS END=248604653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1129:0,83,255:33,0 chr1 248604654 . C . PASS END=248604654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr1 248604655 . A . PASS END=248604656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1126:0,85,255:29,0 chr1 248604657 . G . PASS END=248604657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:28,0 chr1 248604658 . T . PASS END=248604661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr1 248604662 . T . PASS END=248604662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 248604663 . C . PASS END=248604674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr1 248604675 . G . PASS END=248604675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr1 248604676 . C . PASS END=248604678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 248604679 . T . PASS END=248604690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,962:0,67,255:26,0 chr1 248604691 . A . PASS END=248604691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,906:0,37,255:25,0 chr1 248604692 . T . PASS END=248604692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr1 248604693 . C . PASS END=248604693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 248604694 . C T, 12.54 PASS DP=30;MQ=25.10;MQRankSum=2.073;ReadPosRankSum=0.404;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,6,0:0.207,0.000:29:10,5,0:13,1,0:13:47,0,34,199,820,1018:143,0,255:21,0:1.2543e+01,2.4960e-01,3.7583e+01,1.9882e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,3,1,5:13,10,2,4 chr1 248604695 . T . PASS END=248604695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:27,0 chr1 248604696 . G . PASS END=248604697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 248604698 . A . PASS END=248604698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr1 248604699 . T . PASS END=248604711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1082:0,80,255:31,0 chr1 248604712 . G . PASS END=248604724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,1047:0,63,255:27,0 chr1 248604725 . T . PASS END=248604730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 248604731 . A . PASS END=248604731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr1 248604732 . C . PASS END=248604742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1194:0,86,255:32,0 chr1 248604743 . G . PASS END=248604743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:30,0 chr1 248604744 . C . PASS END=248604764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1142:0,83,255:33,0 chr1 248604765 . T A, 40.50 PASS DP=33;MQ=29.69;MQRankSum=1.591;ReadPosRankSum=-1.665;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,21,0:0.636,0.000:33:4,11,0:8,10,0:30:75,0,27,722,429,1151:255,0,255:12,0:4.0505e+01,4.6055e-03,3.0128e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,9,12:8,4,9,12 chr1 248604766 . G . PASS END=248604785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr1 248604786 . C . PASS END=248604786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:28,0 chr1 248604787 . C . PASS END=248604789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1208:0,83,255:30,0 chr1 248604790 . T . PASS END=248604790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr1 248604791 . A . PASS END=248604802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1225:0,86,255:37,0 chr1 248604803 . C . PASS END=248604843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1336:0,81,255:40,0 chr1 248604844 . C . PASS END=248604868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,101,255:35,0 chr1 248604869 . T . PASS END=248604869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:27,0 chr1 248604870 . G . PASS END=248604880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,92,255:34,0 chr1 248604881 . A T, 0.01 DRAGENSnpHardQUAL DP=38;MQ=35.81;MQRankSum=-3.223;ReadPosRankSum=1.621;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:32,6,0:0.158,0.000:38:12,2,0:20,4,0:28:7,0,40,206,1144,1350:72,0,255:31,0:6.6508e-03,2.8153e+01,7.1278e+01,2.3436e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,10,1,5:14,18,3,3 chr1 248604882 . C . PASS END=248604916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:35:0,98,1357:0,98,255:36,0 chr1 248604917 . C . PASS END=248604917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr1 248604918 . G . PASS END=248604918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr1 248604919 . G . PASS END=248604928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:36,0 chr1 248604929 . T . PASS END=248604930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,1 chr1 248604931 . G . PASS END=248605118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:35:0,85,1349:0,85,255:40,0 chr1 248605119 . G . PASS END=248605119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:25:60:0,25,2000:0,25,255:40,0 chr1 248605120 . A . PASS END=248605145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,150,255:40,0 chr1 248605146 . C . PASS END=248605182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,146,255:40,0 chr1 248605183 . C G, 11.55 PASS DP=54;MQ=38.87;MQRankSum=-4.036;ReadPosRankSum=1.719;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,15,0:0.278,0.000:54:19,9,0:20,6,0:12:46,0,40,536,1386,1922:255,0,255:37,0:1.1546e+01,3.1562e-01,4.3441e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,27,6,9:22,17,4,11 chr1 248605184 . G . PASS END=248605220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,138,255:40,0 chr1 248605221 . T . PASS END=248605357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,120,1800:0,124,255:40,0 chr1 248605358 . G . PASS END=248605394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,175,255:40,0 chr1 248605395 . T G, 45.05 PASS DP=63;MQ=63.57;MQRankSum=-1.493;ReadPosRankSum=1.062;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,36,0:0.571,0.000:63:15,11,0:12,25,0:43:80,0,43,1243,941,2184:255,0,255:22,0:4.5050e+01,2.3660e-04,4.6338e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,19,18,18:12,15,17,19 chr1 248605396 . G . PASS END=248605434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:43:0,113,1543:0,113,255:40,0 chr1 248616099 . A . PASS END=248616361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:140,0:140:99:89:0,120,1800:0,255,255:40,0 chr1 248616362 . C . PASS END=248616400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:113:0,120,1800:0,255,255:40,0 chr1 248616401 . G A, 24.66 PASS DP=127;MQ=56.09;MQRankSum=-9.128;ReadPosRankSum=8.011;FractionInformativeReads=0.992;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:73,53,0:0.421,0.000:126:39,30,0:34,23,0:25:59,0,49,1751,2553,4305:255,0,255:40,0:2.4656e+01,1.4922e-02,5.1615e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,41,25,28:30,43,36,17:248616401 chr1 248616402 . A . PASS END=248616407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:130,0:130:99:126:0,120,1800:0,255,255:40,0 chr1 248616408 . C T, 24.91 PASS DP=126;MQ=56.31;MQRankSum=-9.236;ReadPosRankSum=6.513;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:73,53,0:0.421,0.000:126:37,30,0:36,23,0:25:60,0,49,1871,2537,4407:255,0,255:40,0:2.4907e+01,1.4085e-02,5.1614e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,41,25,28:34,39,26,27:248616401 chr1 248616409 . T . PASS END=248616447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:111:0,120,1800:0,255,255:40,0 chr1 248616448 . G . PASS END=248616549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:36:0,84,1260:0,94,255:40,0 chr1 248616550 . T . PASS END=248616550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1128:0,78,255:32,0 chr1 248616551 . T . PASS END=248616557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1256:0,89,255:35,0 chr1 248616558 . T . PASS END=248616558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr1 248616559 . C . PASS END=248616571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1168:0,88,255:34,0 chr1 248616572 . C . PASS END=248616572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:27,0 chr1 248616573 . A . PASS END=248616703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1099:0,80,255:40,0 chr1 248616704 . C . PASS END=248616704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:31:49:0,31,1659:0,31,255:40,3 chr1 248616705 . T . PASS END=248616710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:40:48:0,40,1604:0,40,255:40,3 chr1 248616711 . G . PASS END=248616712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:33:51:0,33,1671:0,33,255:40,3 chr1 248616713 . G . PASS END=248616748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,115,1800:0,115,255:40,0 chr1 248616749 . C . PASS END=248616749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:10:55:0,10,1739:0,10,255:40,0 chr1 248616750 . T . PASS END=248616808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1125:0,80,255:40,0 chr1 248616809 . A . PASS END=248616809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,975:0,79,255:27,0 chr1 248616810 . G . PASS END=248616813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr1 248616814 . T . PASS END=248616814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:27,0 chr1 248616815 . T . PASS END=248616818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr1 248616819 . A . PASS END=248616820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr1 248616821 . G . PASS END=248616821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 248616822 . T . PASS END=248616822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 248616823 . G . PASS END=248616825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 248616826 . C . PASS END=248616834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,68,255:25,0 chr1 248616835 . T . PASS END=248616857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:18:0,50,765:0,50,255:19,0 chr1 248616858 . G . PASS END=248616858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 248616859 . G . PASS END=248616862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 248616863 . A . PASS END=248616867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,540:0,35,255:15,0 chr1 248616868 . T . PASS END=248616879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:15,0 chr1 248616880 . T . PASS END=248616880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 248616881 . G . PASS END=248616882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 248616883 . T . PASS END=248616883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr1 248616884 . G . PASS END=248616936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,599:0,47,255:19,0 chr1 248616937 . C . PASS END=248616937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr1 248616938 . C . PASS END=248616939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 248616940 . T . PASS END=248616959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:24,0 chr1 248616960 . C . PASS END=248616960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr1 248616961 . C . PASS END=248616965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr1 248616966 . A . PASS END=248616966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,894:0,50,255:25,0 chr1 248616967 . T . PASS END=248616971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 248616972 . A . PASS END=248616972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr1 248616973 . G . PASS END=248616975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr1 248616976 . T . PASS END=248616976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:26,0 chr1 248616977 . G . PASS END=248616980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:29,0 chr1 248616981 . A . PASS END=248616981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr1 248616982 . A . PASS END=248617027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1005:0,87,255:34,0 chr1 248617028 . T . PASS END=248617028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1218:0,39,255:33,0 chr1 248617029 . T . PASS END=248617038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr1 248617039 . G . PASS END=248617039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:31,0 chr1 248617040 . C . PASS END=248617045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr1 248617046 . G . PASS END=248617046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr1 248617047 . G . PASS END=248617049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 248617050 . G . PASS END=248617050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr1 248617051 . C . PASS END=248617051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:32,0 chr1 248617052 . G . PASS END=248617053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr1 248617054 . C . PASS END=248617054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:32,1 chr1 248617055 . T . PASS END=248617055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 248617056 . G . PASS END=248617068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:34,0 chr1 248617069 . G . PASS END=248617069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr1 248617070 . C . PASS END=248617073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr1 248636652 . A . PASS END=248636654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:31,0 chr1 248636655 . T . PASS END=248636655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:30,0 chr1 248636656 . G . PASS END=248636656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr1 248636657 . C . PASS END=248636663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1131:0,80,255:32,0 chr1 248636664 . A . PASS END=248636664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr1 248636665 . A . PASS END=248636666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:31,0 chr1 248636667 . C . PASS END=248636667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:31,0 chr1 248636668 . A . PASS END=248636669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1119:0,82,255:31,0 chr1 248636670 . A . PASS END=248636670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1147:0,52,255:30,0 chr1 248636671 . C . PASS END=248636672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1186:0,83,255:31,0 chr1 248636673 . T . PASS END=248636673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1117:0,60,255:31,0 chr1 248636674 . C . PASS END=248636680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:32,0 chr1 248636681 . T . PASS END=248636681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:32,0 chr1 248636682 . C . PASS END=248636687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1103:0,82,255:33,0 chr1 248636688 . G . PASS END=248636688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr1 248636689 . C . PASS END=248636692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:34,0 chr1 248636693 . C . PASS END=248636693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr1 248636694 . A . PASS END=248636695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1278:0,89,255:34,0 chr1 248636696 . T . PASS END=248636697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1255:0,69,255:35,0 chr1 248636698 . A . PASS END=248636701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1235:0,91,255:35,0 chr1 248636702 . C . PASS END=248636703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:70:36:0,70,1225:0,70,255:34,0 chr1 248636704 . C . PASS END=248636705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1266:0,91,255:31,0 chr1 248636706 . C . PASS END=248636707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:30,0 chr1 248636708 . C . PASS END=248636710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,92,255:30,0 chr1 248636711 . G . PASS END=248636715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:69:36:0,69,1269:0,69,255:30,0 chr1 248636716 . T . PASS END=248636717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1188:0,85,255:30,0 chr1 248636718 . T . PASS END=248636718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1095:0,60,255:29,0 chr1 248636719 . T . PASS END=248636720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr1 248636721 . G . PASS END=248636721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1104:0,65,255:27,0 chr1 248636722 . C . PASS END=248636722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:26,0 chr1 248636723 . T . PASS END=248636723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 248636724 . G . PASS END=248636724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:25,0 chr1 248636725 . A . PASS END=248636728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,945:0,76,255:21,0 chr1 248636729 . C . PASS END=248636736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:26:0,45,765:0,45,255:20,0 chr1 248636737 . C . PASS END=248636740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,61,255:21,0 chr1 248636741 . C . PASS END=248636769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr1 248636770 . T . PASS END=248636778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr1 248636779 . C . PASS END=248636784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr1 248636785 . C . PASS END=248636785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr1 248636786 . T . PASS END=248636793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr1 248636794 . C . PASS END=248636795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr1 248636796 . C . PASS END=248636818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr1 248636819 . A . PASS END=248636819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 248636820 . G . PASS END=248636854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr1 248636855 . C . PASS END=248636855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr1 248636856 . A . PASS END=248636859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr1 248636860 . A . PASS END=248636876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr1 248636877 . C . PASS END=248636877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr1 248636878 . T . PASS END=248636878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:25,0 chr1 248636879 . C . PASS END=248636879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr1 248636880 . A . PASS END=248636880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr1 248636881 . T . PASS END=248636889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:31,0 chr1 248636890 . G . PASS END=248636890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr1 248636891 . C . PASS END=248637008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:31:0,93,1140:0,93,255:40,0 chr1 248637009 . C . PASS END=248637045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1156:0,83,255:35,0 chr1 248637046 . G A, 30.01 PASS DP=32;MQ=25.17;MQRankSum=1.866;ReadPosRankSum=0.735;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:9,6,0:7,10,0:29:65,0,32,572,544,1115:255,0,255:15,0:3.0006e+01,5.7124e-03,3.5006e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,3,13:9,7,9,7 chr1 248637047 . C . PASS END=248637048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr1 248637049 . G . PASS END=248637054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,84,255:25,0 chr1 248637055 . T . PASS END=248637114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:16:0,40,612:0,40,255:19,0 chr1 248637115 . T C, 35.57 PASS DP=17;MQ=17.14;MQRankSum=2.549;ReadPosRankSum=1.573;FractionInformativeReads=0.941;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:6,10,0:0.625,0.000:16:2,6,0:4,4,0:4:71,4,0,333,219,548:255,0,174:6,0:3.5573e+01,3.5728e+00,2.5145e+00,3.3251e+02,2.5294e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,0,4,6:2,4,6,4 chr1 248637116 . T . PASS END=248637116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:15,0 chr1 248637117 . T . PASS END=248637118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 248637119 . G . PASS END=248637119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr1 248637120 . G . PASS END=248637122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr1 248637123 . A . PASS END=248637123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr1 248637124 . T . PASS END=248637126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 248637127 . T . PASS END=248637127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,468:0,17,255:14,0 chr1 248637128 . T . PASS END=248637152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,479:0,45,255:16,0 chr1 248637153 . A . PASS END=248637157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr1 248637158 . G . PASS END=248637161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 248637162 . T . PASS END=248637162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr1 248637163 . T . PASS END=248637183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr1 248637184 . A . PASS END=248637184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr1 248637185 . A . PASS END=248637193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 248637194 . T . PASS END=248637194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:9,0 chr1 248637195 . T . PASS END=248637195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr1 248637196 . T . PASS END=248637198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248637199 . T C, 2.56 DRAGENSnpHardQUAL DP=10;MQ=13.90;MQRankSum=2.166;ReadPosRankSum=2.166;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,3,0:0.300,0.000:10:5,3,0:2,0,0:4:34,0,14,107,250,358:86,0,241:6,0:2.5555e+00,3.6041e+00,2.0604e+01,1.1082e+02,2.8868e+02,3.6413e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,0,3:5,2,0,3 chr1 248637200 . C . PASS END=248637210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr1 248637211 . C . PASS END=248637211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr1 248637212 . T . PASS END=248637215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr1 248637216 . C . PASS END=248637216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:6,0 chr1 248637217 . T . PASS END=248637222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr1 248637223 . A . PASS END=248637224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr1 248637225 . C . PASS END=248637229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 248637230 . C . PASS END=248637244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:5,0 chr1 248637245 . C . PASS END=248637261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:2:0,3,45:0,6,78:3,0 chr1 248637262 . T C, 26.32 PASS DP=5;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:64,15,0,194,15,194:194,15,0:0,0:2.6322e+01,1.2322e+01,2.7308e-01,1.9097e+02,4.7092e+01,1.9397e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,1:0,0,3,2 chr1 248637263 . G . PASS END=248637276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr1 248637277 . T . PASS END=248637290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 248637291 . G A, 47.14 PASS DP=7;MQ=19.50;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,3,0:0,4,0:18:85,21,0,271,21,271:255,21,0:0,0:4.7135e+01,1.8135e+01,6.7344e-02,2.6851e+02,5.2905e+01,2.7151e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,0:0,0,3,4 chr1 248637292 . C . PASS END=248637295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr1 248637296 . C . PASS END=248637307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:13,0 chr1 248637308 . C . PASS END=248637315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr1 248637316 . C . PASS END=248637324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:24,0 chr1 248637325 . T . PASS END=248637327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:26,0 chr1 248637328 . T . PASS END=248637361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1041:0,87,255:40,0 chr1 248637362 . C T, 43.21 PASS DP=40;MQ=30.22;MQRankSum=5.053;ReadPosRankSum=1.444;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,27,0:0.675,0.000:40:7,18,0:6,9,0:3:78,3,0,178,178,178:255,0,255:13,0:4.3207e+01,2.9574e+00,3.0643e+00,1.7798e+02,2.1275e+02,1.8099e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,0,21,6:7,6,16,11 chr1 248637363 . G . PASS END=248637366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,120,1800:0,129,255:40,0 chr1 248637367 . A G, 3.06 DRAGENSnpHardQUAL DP=44;MQ=31.12;MQRankSum=-2.444;ReadPosRankSum=-1.809;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,23,0:0.523,0.000:44:13,14,0:8,9,0:3:35,0,37,137,137,137:255,0,255:21,0:3.0643e+00,2.9574e+00,4.3207e+01,1.4020e+02,1.7497e+02,1.4321e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,6,23,0:11,10,14,9 chr1 248637368 . C . PASS END=248637380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:47:0,120,1800:0,141,255:40,0 chr1 248637381 . G A, 1.18 DRAGENSnpHardQUAL DP=61;MQ=30.04;MQRankSum=0.408;ReadPosRankSum=0.717;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:49,12,0:0.197,0.000:61:31,6,0:18,6,0:6:30,0,40,430,1697,2126:255,0,255:40,0:1.1821e+00,6.2291e+00,4.9479e+01,4.3575e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,17,11,1:22,27,5,7 chr1 248637382 . C . PASS END=248637390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,183,255:40,0 chr1 248637391 . C T, 10.76 PASS DP=66;MQ=29.53;MQRankSum=0.209;ReadPosRankSum=-0.554;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,18,0:0.273,0.000:66:27,13,0:21,5,0:11:45,0,40,628,1710,2337:255,0,255:40,0:1.0756e+01,3.8136e-01,4.3631e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,18,14,4:29,19,9,9 chr1 248637392 . C . PASS END=248637397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,188,255:40,0 chr1 248637398 . C T, 1.16 DRAGENSnpHardQUAL DP=78;MQ=29.34;MQRankSum=0.905;ReadPosRankSum=-0.996;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:64,14,0:0.179,0.000:78:36,6,0:28,8,0:6:30,0,40,462,2243,2706:255,0,255:40,0:1.1595e+00,6.3021e+00,4.9552e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:41,23,8,6:29,35,8,6 chr1 248637399 . A . PASS END=248637415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:78:0,120,1800:0,230,255:40,0 chr1 248637416 . G C, 40.25 PASS DP=95;MQ=29.07;MQRankSum=3.575;ReadPosRankSum=3.241;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,51,0:0.543,0.000:94:17,33,0:26,18,0:33:75,0,30,175,175,175:255,0,255:40,0:4.0252e+01,2.3674e-03,3.3462e+01,1.7502e+02,2.0979e+02,1.7803e+02:0.00,34.77,37.78,34.77,69.54,37.78:27,16,31,20:19,24,27,24 chr1 248637417 . C CTCT,T, 40.25 PASS DP=95;MQ=29.07;FractionInformativeReads=0.989 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:43,0,51,0:0.000,0.543,0.000:94:17,0,33,0:26,0,18,0:33:75,1731,1441,0,1369,30,1831,1831,1831,1831:255,0,255:40,0:4.0252e+01,4.5000e+02,4.5000e+02,2.3674e-03,4.5000e+02,3.3462e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,30.00,33.01,34.77,64.77,37.78,34.77,64.77,69.54,37.78:27,16,31,20:19,24,27,24 chr1 248637418 . T . PASS END=248637479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:95:0,120,1800:0,253,255:40,0 chr1 248637480 . A G, 11.89 PASS DP=115;MQ=27.23;MQRankSum=0.287;ReadPosRankSum=0.526;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:84,31,0:0.270,0.000:115:34,22,0:50,9,0:12:46,0,40,1109,2945,4054:255,0,255:40,0:1.1892e+01,2.9060e-01,4.3291e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:43,41,18,13:43,41,17,14 chr1 248637481 . T . PASS END=248637542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:111:0,120,1800:0,255,255:40,0 chr1 248637543 . C T, 0.29 DRAGENSnpHardQUAL DP=118;MQ=26.12;MQRankSum=4.293;ReadPosRankSum=-1.119;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:100,18,0:0.153,0.000:118:48,10,0:52,8,0:12:23,0,31,636,3502,4138:255,0,255:40,0:2.8856e-01,1.1921e+01,4.5921e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:56,44,10,8:50,50,14,4 chr1 248637544 . G . PASS END=248637580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:100:0,120,1800:0,255,255:40,0 chr1 248637581 . G . PASS END=248637608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:89:0,120,1800:0,243,255:40,0 chr1 248651890 . A . PASS END=248651909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,164:0,15,149:6,0 chr1 248651910 . G . PASS END=248651911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 248651912 . C . PASS END=248651912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr1 248651913 . C . PASS END=248651916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr1 248651917 . C . PASS END=248651917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr1 248651918 . A . PASS END=248651926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr1 248651927 . A G, 35.11 PASS DP=8;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,3,0:0,5,0:21:73,24,0,310,24,310:255,24,0:0,0:3.5113e+01,2.1113e+01,3.5103e-02,3.0733e+02,5.5883e+01,3.1033e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,4:0,0,5,3 chr1 248651928 . G . PASS END=248651931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr1 248651932 . G . PASS END=248651941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr1 248651942 . T . PASS END=248651945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 248651946 . G . PASS END=248651946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr1 248651947 . G . PASS END=248651948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr1 248651949 . A . PASS END=248651949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 248651950 . C . PASS END=248651951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 248651952 . C . PASS END=248651958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 248651959 . C T, 0.08 DRAGENSnpHardQUAL DP=22;MQ=16.81;MQRankSum=-1.830;ReadPosRankSum=-0.468;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:18,4,0:0.182,0.000:22:7,3,0:11,1,0:17:18,0,31,143,615,757:89,0,255:17,0:8.3441e-02,1.7208e+01,5.0874e+01,1.6001e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,4,0:12,6,3,1 chr1 248651960 . G . PASS END=248651973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,717:0,66,255:22,0 chr1 248651974 . G . PASS END=248651974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 248651975 . C . PASS END=248651975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr1 248651976 . T . PASS END=248651976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 248651977 . C . PASS END=248651992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr1 248651993 . T . PASS END=248651993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr1 248651994 . C . PASS END=248652004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 248652005 . T . PASS END=248652005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 248652006 . C . PASS END=248652010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr1 248652011 . A T, 8.66 DRAGENSnpHardQUAL DP=22;MQ=16.71;MQRankSum=-1.198;ReadPosRankSum=0.493;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,7,0:0.318,0.000:22:6,4,0:9,3,0:9:43,0,31,250,455,705:197,0,255:15,0:8.6565e+00,6.3800e-01,3.4305e+01,2.5061e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,5,2:8,7,4,3 chr1 248652012 . G . PASS END=248652018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr1 248652019 . T . PASS END=248652019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr1 248652020 . C . PASS END=248652022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr1 248652023 . G A, 8.24 DRAGENSnpHardQUAL DP=22;MQ=16.71;MQRankSum=-1.198;ReadPosRankSum=1.551;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,7,0:0.318,0.000:22:6,4,0:9,3,0:8:42,0,31,250,536,786:183,0,255:15,0:8.2430e+00,7.0699e-01,3.4374e+01,2.5083e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,5,2:6,9,6,1 chr1 248652024 . A . PASS END=248652024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 248652025 . A . PASS END=248652037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr1 248652038 . T . PASS END=248652038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 248652039 . C . PASS END=248652047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 248652048 . A . PASS END=248652048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,697:0,49,255:19,0 chr1 248652049 . C . PASS END=248652049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 248652050 . A . PASS END=248652057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 248652058 . G A, 9.37 DRAGENSnpHardQUAL DP=21;MQ=16.83;MQRankSum=-1.231;ReadPosRankSum=2.350;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,7,0:0.333,0.000:21:6,4,0:8,3,0:9:44,0,28,144,144,144:192,0,255:11,0:9.3714e+00,5.3711e-01,3.1204e+01,1.4414e+02,1.7891e+02,1.4715e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,8,4,3:8,6,5,2:248652058 chr1 248652059 . C . PASS END=248652060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,721:0,47,255:18,0 chr1 248652061 . C T, 9.37 DRAGENSnpHardQUAL DP=20;MQ=16.95;MQRankSum=-1.268;ReadPosRankSum=2.219;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,7,0:0.350,0.000:20:6,4,0:7,3,0:9:44,0,28,144,144,144:203,0,255:12,0:9.3714e+00,5.3711e-01,3.1204e+01,1.4414e+02,1.7891e+02,1.4715e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,7,4,3:7,6,5,2:248652058 chr1 248652062 . A . PASS END=248652070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 248652071 . G C, 11.33 PASS DP=19;MQ=15.77;MQRankSum=-1.056;ReadPosRankSum=1.564;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:12,7,0:0.368,0.000:19:6,4,0:6,3,0:11:46,0,30,222,384,606:192,0,255:6,0:1.1332e+01,3.3413e-01,3.3334e+01,2.2189e+02,4.1943e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,4,3:6,6,5,2:248652058 chr1 248652072 . C . PASS END=248652080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:16:0,30,450:0,31,255:11,0 chr1 248652081 . C . PASS END=248652081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:9,0 chr1 248652082 . T . PASS END=248652092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:10:0,15,225:0,30,255:6,0 chr1 248652093 . T . PASS END=248652094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr1 248652095 . A . PASS END=248652095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 248652096 . A . PASS END=248652099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 248652100 . T . PASS END=248652101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,250:5,0 chr1 248652102 . T . PASS END=248652102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,148:0,4,148:4,0 chr1 248652103 . C . PASS END=248652105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr1 248652106 . A . PASS END=248652107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:4,0 chr1 248652108 . G . PASS END=248652109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:5,0 chr1 248652110 . A . PASS END=248652110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr1 248652111 . C . PASS END=248652114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr1 248652115 . G . PASS END=248652132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr1 248652133 . G . PASS END=248652137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr1 248652138 . C . PASS END=248652174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr1 248652175 . G A, 14.25 PASS DP=4;MQ=13.31;MQRankSum=0.000;ReadPosRankSum=1.026;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,2,0:0.500,0.000:4:1,1,0:1,1,0:12:49,0,14,72,72,143:66,0,66:2,0:1.4252e+01,2.5209e-01,1.7252e+01,7.1775e+01,1.0655e+02,1.4630e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,0,2:1,1,1,1 chr1 248652176 . T . PASS END=248652199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr1 248652200 . A . PASS END=248652212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:3:0,3,45:0,9,108:3,0 chr1 248652213 . T . LowGQ END=248652517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,16:3,0 chr1 248652518 . T . LowDepth;LowGQ END=248652837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 248684948 . A . PASS END=248685215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1149:0,84,255:40,0 chr1 248685216 . A . PASS END=248685252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1421:0,106,255:40,0 chr1 248685253 . T C, 172.49 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,20,0:0,22,0:122:210,125,0,1569,125,1569:255,126,0:0,0:1.7249e+02,1.2249e+02,0.0000e+00,4.5000e+02,1.5726e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,30:0,0,16,26 chr1 248685254 . G . PASS END=248685290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:37:0,94,1259:0,94,255:38,0 chr1 248685291 . T . PASS END=248685322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,90,255:37,0 chr1 248685323 . G . PASS END=248685336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr1 248685337 . G . PASS END=248685346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:28,0 chr1 248685347 . G . PASS END=248685347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 248685348 . C . PASS END=248685350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 248685351 . T . PASS END=248685352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr1 248685353 . A . PASS END=248685355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248685356 . C . PASS END=248685373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,994:0,70,255:26,0 chr1 248685374 . T . PASS END=248685376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 248685377 . C . PASS END=248685392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,68,255:26,0 chr1 248685393 . G . PASS END=248685393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248685394 . G . PASS END=248685413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,909:0,64,255:25,0 chr1 248685414 . C . PASS END=248685416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 248685417 . T . PASS END=248685417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr1 248685418 . A . PASS END=248685461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1197:0,84,255:35,0 chr1 248685462 . G . PASS END=248685462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:33,0 chr1 248685463 . C . PASS END=248685528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1164:0,83,255:34,0 chr1 248685529 . C . PASS END=248685533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:25,0 chr1 248685534 . A . PASS END=248685553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,980:0,80,255:31,0 chr1 248685554 . A . PASS END=248685554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 248685555 . G . PASS END=248685579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:34,0 chr1 248685580 . G . PASS END=248685580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:31,0 chr1 248685581 . T . PASS END=248685681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:38:0,88,1427:0,88,255:40,0 chr1 248685682 . G . PASS END=248685718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,114,1710:0,121,255:40,0 chr1 248685719 . A T, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.889;ReadPosRankSum=2.451;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,29,0:0.592,0.000:49:11,13,0:9,16,0:47:85,0,47,1000,687,1687:255,0,255:19,0:5.0000e+01,8.6201e-05,5.0072e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,13,16:10,10,11,18 chr1 248685720 . T . PASS END=248685756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,114,1710:0,119,255:40,0 chr1 248685757 . G . PASS END=248685882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:33:0,83,1208:0,83,255:40,0 chr1 248685883 . A . PASS END=248685885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr1 248685886 . C . PASS END=248685888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr1 248685889 . C . PASS END=248685898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:30:0,63,945:0,90,255:25,0 chr1 248721845 . C . LowDepth;LowGQ END=248722268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr1 248722269 . G . LowDepth;LowGQ END=248722294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr1 248722295 . G . LowDepth END=248722331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 248722332 . A G, 5.47 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=7.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4658e+00,4.4680e+00,4.4583e+00,4.0236e+01,3.9238e+01,4.3236e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,0:0,0,0,1 chr1 248722333 . A . LowDepth END=248722369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr1 248722370 . G . LowDepth END=248722380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr1 248722381 . C . LowDepth;LowGQ END=248722450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,16:2,0 chr1 248722451 . C T, 2.13 DRAGENSnpHardQUAL DP=2;MQ=22.77;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:1,0,0:0,1,0:4:33,0,29,36,36,72:33,0,33:1,0:2.1263e+00,4.1254e+00,3.6125e+01,3.9906e+01,7.4661e+01,7.8672e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,1,0:1,0,0,1 chr1 248722452 . G . PASS END=248722486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,70:0,6,70:3,0 chr1 248722487 . C . PASS END=248722506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr1 248722507 . C . LowGQ END=248722507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr1 248722508 . C . PASS END=248722571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr1 248722572 . T . PASS END=248722610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,156:0,15,156:6,0 chr1 248722611 . C G, 18.56 PASS DP=5;MQ=19.56;MQRankSum=-0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:1,4,0:0.800,0.000:5:1,3,0:0,1,0:16:53,0,17,85,28,113:96,0,16:1,0:1.8565e+01,1.0780e-01,1.9747e+01,8.5601e+01,6.2637e+01,1.1636e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,3,1:1,0,4,0:248722611 chr1 248722612 . T . PASS END=248722612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 248722613 . G . LowGQ END=248722613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr1 248722614 . T . PASS END=248722620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr1 248722621 . G A, 19.05 PASS DP=5;MQ=19.56;MQRankSum=0.358;ReadPosRankSum=1.231;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:2,3,0:0.600,0.000:5:1,3,0:1,0,0:19:54,0,26,154,154,154:101,0,62:2,0:1.9050e+01,6.0256e-02,2.8749e+01,1.5382e+02,1.8859e+02,1.5683e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,1,3,0:2,0,3,0:248722611 chr1 248722622 . G . PASS END=248722622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr1 248722623 . G . PASS END=248722623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 248722624 . C T, 19.05 PASS DP=7;MQ=18.15;MQRankSum=0.550;ReadPosRankSum=1.300;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:3,4,0:0.571,0.000:7:1,4,0:2,0,0:19:54,0,26,154,154,154:134,0,95:3,0:1.9050e+01,6.0256e-02,2.8749e+01,1.5382e+02,1.8859e+02,1.5683e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,1,4,0:2,1,4,0:248722611 chr1 248722625 . G . PASS END=248722642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr1 248722643 . G . PASS END=248722658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 248722659 . C T, 19.21 PASS DP=7;MQ=15.40;MQRankSum=1.495;ReadPosRankSum=-0.922;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,5,0:0.714,0.000:7:0,5,0:2,0,0:13:54,0,11,179,71,250:173,0,56:2,0:1.9208e+01,2.1761e-01,1.4333e+01,1.7900e+02,1.0631e+02,2.5333e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,1,5,0:1,1,5,0 chr1 248722660 . C . PASS END=248722667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 248722668 . G . PASS END=248722670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 248722671 . T A, 30.83 PASS DP=7;MQ=15.40;MQRankSum=0.742;ReadPosRankSum=-0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,6,0:0.857,0.000:7:0,5,0:1,1,0:9:68,11,0,226,18,233:216,4,0:1,0:3.0829e+01,8.8290e+00,6.1372e-01,2.2336e+02,5.0442e+01,2.3321e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,5,1:0,1,6,0 chr1 248722672 . T . PASS END=248722694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,172:6,0 chr1 248722695 . A . PASS END=248722696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 248722697 . A . PASS END=248722699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr1 248722700 . A . PASS END=248722711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr1 248722712 . A . PASS END=248722712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr1 248722713 . T . PASS END=248722721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr1 248722722 . T C, 89.75 PASS DP=9;MQ=22.87;MQRankSum=0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,8,0:0.889,0.000:9:0,4,0:1,4,0:61:128,64,0,228,228,228:255,0,12:1,0:8.9749e+01,6.0749e+01,3.6240e-06,2.2452e+02,2.5929e+02,2.2753e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,5,3:1,0,1,7 chr1 248722723 . G A, 29.01 PASS DP=9;MQ=22.87;MQRankSum=1.159;ReadPosRankSum=0.876;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,5,0:0.556,0.000:9:1,3,0:3,2,0:28:64,0,31,164,164,164:167,0,128:4,0:2.9007e+01,7.2355e-03,3.3895e+01,1.6378e+02,1.9855e+02,1.6679e+02:0.00,34.77,37.78,34.77,69.54,37.78:2,2,3,2:1,3,1,4 chr1 248722724 . T . PASS END=248722725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 248722726 . T . PASS END=248722728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248722729 . A . PASS END=248722729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 248722730 . G . PASS END=248722731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248722732 . G . LowGQ END=248722732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:8,0 chr1 248722733 . T . PASS END=248722737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr1 248722738 . T . LowGQ END=248722739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,371:0,0,255:12,0 chr1 248722740 . A . PASS END=248722761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,405:0,36,255:13,0 chr1 248722762 . T . PASS END=248722762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr1 248722763 . G . PASS END=248722763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 248722764 . T . PASS END=248722764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:11,0 chr1 248722765 . G . PASS END=248722766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr1 248722767 . T . PASS END=248722767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,486:0,29,255:12,0 chr1 248722768 . T . PASS END=248722770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 248722771 . C . PASS END=248722776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 248722777 . T A, 34.74 PASS DP=14;MQ=24.19;MQRankSum=0.639;ReadPosRankSum=1.734;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,12,0:0.857,0.000:14:2,7,0:0,5,0:10:69,0,7,400,43,443:255,0,27:3,0:3.4744e+01,4.1023e-01,1.0467e+01,4.0076e+02,7.7896e+01,4.4552e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,3,9:0,2,6,6 chr1 248722778 . G . PASS END=248722792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr1 248737102 . C . PASS END=248737112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr1 248737113 . G . PASS END=248737132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr1 248737133 . A . PASS END=248737142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr1 248737143 . G . PASS END=248737143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 248737144 . A . PASS END=248737144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 248737145 . G . PASS END=248737166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr1 248737167 . G . PASS END=248737167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr1 248737168 . G . PASS END=248737170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:16,0 chr1 248737171 . A . PASS END=248737171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr1 248737172 . C . PASS END=248737177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr1 248737178 . A . PASS END=248737178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,415:0,31,255:15,0 chr1 248737179 . T . PASS END=248737192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:18,0 chr1 248737193 . A . PASS END=248737196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr1 248737197 . G . PASS END=248737197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 248737198 . A . PASS END=248737198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:19,0 chr1 248737199 . G . PASS END=248737206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr1 248737207 . G . PASS END=248737208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,767:0,50,255:21,0 chr1 248737209 . T . PASS END=248737215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 248737216 . G . PASS END=248737221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,767:0,50,255:19,0 chr1 248737222 . C . PASS END=248737229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:25,0 chr1 248737230 . T C, 19.44 PASS DP=24;MQ=30.04;MQRankSum=2.346;ReadPosRankSum=2.346;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,5,0:0.208,0.000:24:12,3,0:7,2,0:19:54,0,39,179,679,858:119,0,255:18,0:1.9437e+01,4.9982e-02,4.2383e+01,1.7899e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,1,5,0:11,8,3,2 chr1 248737231 . G . PASS END=248737243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,929:0,62,255:26,0 chr1 248737244 . G . PASS END=248737254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 248737255 . A . PASS END=248737255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 248737256 . C . PASS END=248737258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 248737259 . C G, 126.62 PASS DP=30;MQ=33.03;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,19,0:0,11,0:87:164,90,0,1148,90,1148:255,93,0:0,0:1.2662e+02,8.7286e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,0:0,0,19,11 chr1 248737260 . G . PASS END=248737261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 248737262 . A . PASS END=248737262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr1 248737263 . G . PASS END=248737292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:34:0,99,1303:0,102,255:40,0 chr1 248737293 . G A, 32.83 PASS DP=56;MQ=42.80;MQRankSum=1.454;ReadPosRankSum=-0.640;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:37,19,0:0.339,0.000:56:19,6,0:18,13,0:32:68,0,40,168,168,168:255,0,255:37,0:3.2830e+01,2.4640e-03,4.3377e+01,1.6760e+02,2.0237e+02,1.7061e+02:0.00,34.77,37.78,34.77,69.54,37.78:28,9,18,1:24,13,7,12:248737293 chr1 248737294 . C G, 32.83 PASS DP=60;MQ=42.79;MQRankSum=1.430;ReadPosRankSum=-0.095;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:41,19,0:0.317,0.000:60:20,6,0:21,13,0:32:68,0,40,168,168,168:255,0,255:40,0:3.2830e+01,2.4640e-03,4.3377e+01,1.6760e+02,2.0237e+02,1.7061e+02:0.00,34.77,37.78,34.77,69.54,37.78:31,10,18,1:26,15,7,12:248737293 chr1 248737295 . A . PASS END=248737311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:60:0,120,1800:0,161,255:40,0 chr1 248737312 . G A, 27.58 PASS DP=72;MQ=47.64;MQRankSum=0.595;ReadPosRankSum=0.582;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:51,21,0:0.292,0.000:72:22,11,0:29,10,0:28:62,0,43,648,1742,2391:255,0,255:40,0:2.7583e+01,7.6830e-03,4.6383e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:40,11,14,7:23,28,14,7 chr1 248737313 . T . PASS END=248737318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,196,255:40,0 chr1 248737319 . G A, 26.56 PASS DP=79;MQ=48.90;MQRankSum=2.860;ReadPosRankSum=-0.454;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:57,22,0:0.278,0.000:79:27,9,0:30,13,0:27:61,0,45,632,2014,2646:255,0,255:40,0:2.6564e+01,9.6592e-03,4.8060e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:39,18,15,7:29,28,8,14:248737293 chr1 248737320 . A . PASS END=248737328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:78:0,120,1800:0,204,255:40,0 chr1 248737329 . C T, 39.67 PASS DP=86;MQ=52.02;MQRankSum=-0.976;ReadPosRankSum=1.674;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,34,0:0.395,0.000:86:22,18,0:30,16,0:39:74,0,46,1187,1786,2973:255,0,255:40,0:3.9666e+01,5.2293e-04,4.9051e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:38,14,20,14:26,26,20,14 chr1 248737330 . C . PASS END=248737342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:86:0,120,1800:0,242,255:40,0 chr1 248737343 . C . LowGQ END=248737343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,9:93:0:93:0,0,2860:39,0,255:40,0 chr1 248737344 . G . PASS END=248737347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,255,255:40,0 chr1 248737348 . G A, 39.19 PASS DP=93;MQ=54.87;MQRankSum=1.979;ReadPosRankSum=4.091;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:60,33,0:0.355,0.000:93:30,12,0:30,21,0:38:74,0,43,174,174,174:255,0,255:40,0:3.9188e+01,6.3011e-04,4.6101e+01,1.7396e+02,2.0873e+02,1.7697e+02:0.00,34.77,37.78,34.77,69.54,37.78:37,23,18,15:33,27,15,18 chr1 248737349 . G . PASS END=248737385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:91:0,120,1800:0,255,255:40,0 chr1 248737386 . G . PASS END=248737416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:135,0:135:99:121:0,120,1800:0,255,255:40,0 chr1 248737417 . G . PASS END=248737453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:143,0:143:99:137:0,120,1800:0,255,255:40,0 chr1 248737454 . A G, 12.88 PASS DP=140;MQ=57.95;MQRankSum=-3.172;ReadPosRankSum=1.470;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:109,31,0:0.221,0.000:140:56,18,0:53,13,0:13:47,0,46,1109,3853,4962:255,0,255:40,0:1.2883e+01,2.2964e-01,4.9330e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:57,52,14,17:56,53,13,18 chr1 248737455 . T . PASS END=248737510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:94:0,120,1800:0,241,255:40,0 chr1 248737511 . A G, 25.54 PASS DP=94;MQ=50.47;MQRankSum=0.249;ReadPosRankSum=0.013;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:68,26,0:0.277,0.000:94:34,13,0:34,13,0:26:60,0,45,930,2394,3324:255,0,255:40,0:2.5536e+01,1.2223e-02,4.8062e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:31,37,13,13:39,29,12,14 chr1 248737512 . A . PASS END=248737594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:48:0,117,1755:0,131,255:40,0 chr1 248737595 . A G, 37.96 PASS DP=48;MQ=30.82;MQRankSum=4.139;ReadPosRankSum=0.543;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,23,0:0.489,0.000:47:12,10,0:12,13,0:37:73,0,41,794,813,1606:255,0,255:18,0:3.7961e+01,8.6261e-04,4.4126e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,1,22:10,14,14,9 chr1 248737596 . C . PASS END=248737663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:42:0,97,1549:0,97,255:40,0 chr1 248737664 . C T, 0.03 DRAGENSnpHardQUAL DP=46;MQ=28.25;MQRankSum=2.080;ReadPosRankSum=1.896;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:39,7,0:0.152,0.000:46:21,4,0:18,3,0:22:13,0,38,250,1379,1629:130,0,255:38,0:2.6921e-02,2.2091e+01,6.3091e+01,2.7242e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,23,0,7:16,23,3,4 chr1 248737665 . A . PASS END=248737701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,102,1631:0,102,255:40,0 chr1 248737702 . G . PASS END=248737733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,162,255:40,0 chr1 248737734 . G . LowGQ END=248737734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,8:61:0:61:0,0,1743:82,0,255:40,0 chr1 248737735 . G . PASS END=248737861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1215:0,82,255:40,0 chr1 248737862 . A . PASS END=248737873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:29:0,69,1035:0,82,255:26,0 chr1 248737874 . G . PASS END=248737887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:29,0 chr1 248737888 . C . PASS END=248737888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr1 248737889 . T . PASS END=248737889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 248737890 . C . PASS END=248737891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1116:0,77,255:26,0 chr1 248737892 . G . PASS END=248737892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr1 248737893 . A . PASS END=248737893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:26,0 chr1 248737894 . G . PASS END=248737894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 248737895 . T . PASS END=248737903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,79,255:26,0 chr1 248737904 . A . PASS END=248737906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,927:0,81,255:27,0 chr1 248737907 . A . PASS END=248737911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 248737912 . G . PASS END=248737913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 248737914 . G . PASS END=248737915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr1 248737916 . G . PASS END=248737916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 248737917 . C . PASS END=248737918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr1 248737919 . T . PASS END=248737924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr1 248737925 . G . PASS END=248737925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr1 248737926 . T . PASS END=248737933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1169:0,80,255:29,0 chr1 248737934 . A . PASS END=248737934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr1 248737935 . T . PASS END=248737936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 248737937 . A . PASS END=248737937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr1 248737938 . A . PASS END=248737940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr1 248737941 . A . PASS END=248737943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:29,0 chr1 248737944 . G . PASS END=248737945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr1 248737946 . A . PASS END=248737946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr1 248737947 . G . PASS END=248738045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1186:0,82,255:40,0 chr1 248738046 . T . PASS END=248738046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:34,0 chr1 248738047 . C . PASS END=248738058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1335:0,95,255:36,0 chr1 248756131 . T . PASS END=248756525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:37:0,88,1250:0,88,255:40,1 chr1 248756526 . G . PASS END=248756526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1645:0,67,255:40,0 chr1 248756527 . G . PASS END=248756668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1215:0,86,255:40,0 chr1 248756669 . A . PASS END=248756673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,77,255:26,0 chr1 248756674 . G . PASS END=248756739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1141:0,80,255:37,0 chr1 248756740 . T . PASS END=248756740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:31,0 chr1 248756741 . G . PASS END=248756785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1263:0,86,255:40,0 chr1 248756786 . A . PASS END=248756786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:36,0 chr1 248756787 . G . PASS END=248756823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,101,1336:0,101,255:40,0 chr1 248756824 . C . PASS END=248756824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:38,0 chr1 248756825 . A . PASS END=248757066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:90:37:0,90,1320:0,90,255:40,0 chr1 248757067 . C . PASS END=248757069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:37:0,63,945:0,111,255:21,0 chr1 248789479 . C . PASS END=248789503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:38:0,98,1336:0,98,255:39,0 chr1 248789504 . T C, 166.01 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,23,0:0,17,0:116:204,119,0,1463,119,1463:255,120,0:0,0:1.6601e+02,1.1601e+02,0.0000e+00,4.5000e+02,1.5078e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,17:0,0,24,16 chr1 248789505 . G . PASS END=248789541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,107,1459:0,107,255:40,0 chr1 248789542 . C . PASS END=248790037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:45:0,93,1565:0,93,255:40,1 chr1 248790038 . A . PASS END=248790074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:91:38:0,91,1485:0,91,255:40,0 chr1 248790075 . A G, 161.37 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,18,0:0,20,0:111:199,114,0,1465,114,1465:255,114,0:0,0:1.6137e+02,1.1137e+02,0.0000e+00,4.5000e+02,1.4614e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,19:0,0,23,15 chr1 248790076 . G . PASS END=248790112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1305:0,91,255:40,0 chr1 248790113 . C . PASS END=248790151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1086:0,80,255:32,0 chr1 248790152 . G . PASS END=248790152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr1 248790153 . C . PASS END=248790165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr1 248790166 . G . PASS END=248790166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr1 248790167 . A . PASS END=248790167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1081:0,93,255:31,0 chr1 248790168 . T . PASS END=248790168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:29,0 chr1 248790169 . C . PASS END=248790192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1133:0,80,255:31,0 chr1 248790193 . C . PASS END=248790195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr1 248790196 . G . PASS END=248790196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 248790197 . A . PASS END=248790208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,994:0,70,255:26,0 chr1 248790209 . G . PASS END=248790286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1263:0,86,255:38,0 chr1 248790287 . A . PASS END=248790287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:36,0 chr1 248790288 . C . PASS END=248790408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1186:0,84,255:40,0 chr1 248790409 . A . PASS END=248790409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr1 248790410 . G . PASS END=248790410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 248790411 . A . PASS END=248790412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr1 248790413 . G . PASS END=248790423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr1 248790424 . C . PASS END=248790429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr1 248801588 . C . PASS END=248801591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:15:34:0,15,225:0,102,255:5,0 chr1 248801592 . C T, 84.82 PASS DP=34;MQ=43.63;MQRankSum=1.791;ReadPosRankSum=2.004;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:4,30,0:0.882,0.000:34:1,14,0:3,16,0:39:123,42,0,1113,185,1256:255,0,53:4,0:8.4824e+01,3.9024e+01,5.4390e-04,4.5000e+02,2.1681e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,4,23,7:3,1,17,13 chr1 248801593 . C . PASS END=248801601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:12:33:0,12,180:0,85,255:5,0 chr1 248801602 . T TCA, 55.71 PASS DP=34;MQ=41.96;MQRankSum=1.630;ReadPosRankSum=2.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:4,30,0:0.882,0.000:34:1,14,0:3,16,0:11:88,13,0,188,188,188:255,0,92:4,40:5.5714e+01,1.0514e+01,4.0406e-01,1.9048e+02,2.2048e+02,1.9349e+02:0.00,30.00,33.01,34.77,64.77,37.78:0,4,25,5:3,1,13,17 chr1 248801603 . C . LowGQ END=248801603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,29:34:0:34:0,0,0:255,0,92:33,0 chr1 248801604 . A . PASS END=248801606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr1 248801607 . G . PASS END=248801608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:34,0 chr1 248801609 . C . PASS END=248801609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:34,0 chr1 248801610 . G A, 55.71 PASS DP=35;MQ=41.37;MQRankSum=2.145;ReadPosRankSum=2.852;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:5,30,0:0.857,0.000:35:1,14,0:4,16,0:11:93,13,0,193,193,193:255,0,73:5,0:5.5714e+01,1.0514e+01,4.0406e-01,1.9048e+02,2.2525e+02,1.9349e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,4,25,5:3,2,13,17 chr1 248801611 . C T, 55.71 PASS DP=35;MQ=41.37;MQRankSum=2.145;ReadPosRankSum=2.805;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:5,30,0:0.857,0.000:35:1,14,0:4,16,0:11:93,13,0,193,193,193:255,0,127:5,0:5.5714e+01,1.0514e+01,4.0406e-01,1.9048e+02,2.2525e+02,1.9349e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,4,25,5:3,2,13,17 chr1 248801612 . C . PASS END=248801632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1219:0,88,255:35,0 chr1 248801633 . A G, 56.58 PASS DP=35;MQ=41.37;MQRankSum=2.145;ReadPosRankSum=1.344;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:5,30,0:0.857,0.000:35:1,15,0:4,15,0:11:94,14,0,1078,177,1241:255,0,73:5,0:5.6577e+01,1.1377e+01,3.2841e-01,4.5000e+02,2.0895e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,23,7:2,3,14,16 chr1 248801634 . C . PASS END=248801644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1266:0,102,255:34,0 chr1 248801645 . T . PASS END=248801645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:33,0 chr1 248801646 . A . PASS END=248801657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1218:0,86,255:34,0 chr1 248801658 . A . PASS END=248801658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:30,0 chr1 248801659 . G . PASS END=248801670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1200:0,83,255:32,0 chr1 248801671 . C . PASS END=248801679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1095:0,82,255:30,0 chr1 248801680 . T . PASS END=248801680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:26,0 chr1 248801681 . C . PASS END=248801683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:28,0 chr1 248801684 . C . PASS END=248801690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:73:30:0,73,1003:0,73,255:26,0 chr1 248801691 . T . PASS END=248801691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,947:0,57,255:24,0 chr1 248801692 . A . PASS END=248801699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1008:0,71,255:26,0 chr1 248801700 . G . PASS END=248801702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr1 248801703 . T . PASS END=248801707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:26,0 chr1 248801708 . C . PASS END=248801709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 248801710 . T . PASS END=248801736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,67,255:26,0 chr1 248801737 . A . PASS END=248801737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 248801738 . C . PASS END=248801740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 248801741 . C . PASS END=248801768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr1 248801769 . G . PASS END=248801777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1103:0,90,255:31,0 chr1 248801778 . A T, 50.59 PASS DP=32;MQ=24.09;MQRankSum=2.004;ReadPosRankSum=1.473;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:6,26,0:0.812,0.000:32:1,10,0:5,16,0:10:88,13,0,885,198,1070:255,0,111:5,0:5.0586e+01,1.0086e+01,4.4820e-01,4.5000e+02,2.3007e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,0,15,11:1,5,13,13 chr1 248801779 . G . PASS END=248801815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1164:0,84,255:40,0 chr1 248801816 . C . PASS END=248801859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1800:0,137,255:40,0 chr1 248801860 . G . PASS END=248801896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:75:0,120,1800:0,162,255:40,0 chr1 248801897 . G A, 13.93 PASS DP=106;MQ=25.39;MQRankSum=1.788;ReadPosRankSum=1.340;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:80,26,0:0.245,0.000:106:39,11,0:41,15,0:14:49,0,39,149,149,149:255,0,255:36,0:1.3926e+01,1.7978e-01,4.2430e+01,1.4870e+02,1.8347e+02,1.5171e+02:0.00,34.77,37.78,34.77,69.54,37.78:46,34,16,10:51,29,15,11 chr1 248801898 . A . PASS END=248801943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:103:0,99,1485:0,255,255:40,1 chr1 248801944 . TCAGCACG T, 34.34 PASS DP=103;MQ=22.32;MQRankSum=1.626;ReadPosRankSum=2.433;FractionInformativeReads=0.942;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,64,0:0.660,0.000:97:16,34,0:17,30,0:27:63,0,25,2688,1382,4070:255,0,255:31,88:3.4342e+01,8.4740e-03,2.8010e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,29.00,32.00,34.77,63.77,37.77:19,14,35,29:20,13,35,29 chr1 248801945 . C . LowGQ END=248801952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:36,88:124:0:97:0,0,0:255,0,255:40,88 chr1 248801953 . A . PASS END=248801998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:65:0,120,1800:0,177,255:40,0 chr1 248801999 . C . PASS END=248802133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1181:0,90,255:40,0 chr1 248802134 . T . PASS END=248802156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,808:0,66,255:26,0 chr1 248802157 . G . PASS END=248802171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:19,0 chr1 248802172 . G . PASS END=248802173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:18:0,36,540:0,54,255:12,0 chr1 248802174 . G . PASS END=248802183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr1 248802184 . C . PASS END=248802192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr1 248802193 . A . PASS END=248802206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:11:0,18,270:0,33,255:6,0 chr1 248802207 . A . PASS END=248802237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:10:0,12,180:0,30,255:6,0 chr1 248802238 . T . LowGQ END=248802248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:11:0,0,90:0,0,255:3,0 chr1 248802249 . T TAGA, 49.01 PASS DP=12;MQ=11.92;FractionInformativeReads=0.833 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,5,0:0,5,0:27:81,30,0,375,30,375:244,0,111:0,9:4.9007e+01,2.7007e+01,8.7178e-03,3.7792e+02,6.1872e+01,3.8106e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,5,5:0,0,6,4 chr1 248802250 . A . LowGQ END=248802250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,7:12:0:12:0,0,0:227,0,158:8,1 chr1 248802251 . G . PASS END=248802255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,360:0,20,255:9,0 chr1 248802256 . T . LowGQ END=248802261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:1,0,255:8,0 chr1 248802262 . C . PASS END=248802262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 248802263 . T . PASS END=248802263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,351:0,5,255:10,0 chr1 248802264 . G . PASS END=248802292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr1 248802293 . C . PASS END=248802372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr1 248802373 . A . PASS END=248802374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 248802375 . A . PASS END=248802387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr1 248802388 . T . PASS END=248802402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr1 248802403 . C . PASS END=248802431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,178:0,15,178:6,0 chr1 248802432 . T . PASS END=248802453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr1 248802454 . A . PASS END=248802454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,88:0,1,88:5,0 chr1 248802455 . G . PASS END=248802468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr1 248802469 . C T, 26.32 PASS DP=5;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:64,15,0,194,15,194:225,18,0:0,0:2.6322e+01,1.2322e+01,2.7308e-01,1.9116e+02,4.7092e+01,1.9416e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,0:0,0,4,1 chr1 248802470 . T . PASS END=248802474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:4,0 chr1 248802475 . A . PASS END=248802475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr1 248802476 . G . PASS END=248802478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,194:4,0 chr1 248802479 . A . LowGQ END=248802479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,86:2,0,88:4,0 chr1 248802480 . A . PASS END=248802506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr1 248802507 . A . PASS END=248802516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr1 248802517 . G . PASS END=248802559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr1 248813232 . T . PASS END=248813509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:34:0,84,1211:0,84,255:40,0 chr1 248813510 . A . PASS END=248813546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:39:0,96,1413:0,96,255:40,0 chr1 248813547 . G C, 14.34 PASS DP=38;MQ=37.35;MQRankSum=-3.734;ReadPosRankSum=0.869;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,11,0:0.289,0.000:38:15,6,0:12,5,0:14:49,0,40,393,937,1330:255,0,255:27,0:1.4336e+01,1.6327e-01,4.3288e+01,3.9359e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,11,2,9:16,11,7,4 chr1 248813548 . A . PASS END=248813566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,98,255:35,0 chr1 248813567 . G . PASS END=248813569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr1 248813570 . T . PASS END=248813584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1094:0,87,255:30,0 chr1 248813585 . C . PASS END=248813595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1218:0,86,255:31,0 chr1 248813596 . G . PASS END=248813597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr1 248813598 . C . PASS END=248813690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1210:0,83,255:40,0 chr1 248813691 . C . PASS END=248813720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:47:0,90,1350:0,128,255:36,0 chr1 248813721 . A . PASS END=248813731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:72:50:0,72,1080:0,150,255:26,0 chr1 248813732 . C . PASS END=248813732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:52:56:0,52,1908:0,52,255:26,1 chr1 248813733 . T TC, 40.00 PASS DP=56;MQ=30.08;MQRankSum=4.386;ReadPosRankSum=-2.551;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,28,0:0.509,0.000:55:13,10,0:14,18,0:35:69,0,33,896,859,1755:255,0,255:26,39:4.0001e+01,1.4530e-03,3.6298e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:14,13,14,14:10,17,14,14 chr1 248813734 . C . LowGQ END=248813734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,26:56:0:56:0,0,155:255,0,255:40,1 chr1 248813735 . C . PASS END=248813748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,129,255:40,0 chr1 248813749 . G A, 40.00 PASS DP=56;MQ=30.74;MQRankSum=4.493;ReadPosRankSum=-0.869;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,29,0:0.518,0.000:56:13,11,0:14,18,0:32:75,0,30,175,175,175:255,0,255:27,0:4.0002e+01,2.4938e-03,3.3241e+01,1.7477e+02,2.0954e+02,1.7778e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,16,12,17:7,20,12,17 chr1 248813750 . C . PASS END=248813788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,138,255:40,0 chr1 248813789 . G . PASS END=248813826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:33:0,87,1305:0,99,255:40,0 chr1 248813827 . T C, 13.83 PASS DP=33;MQ=36.06;MQRankSum=-3.254;ReadPosRankSum=3.497;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,9,0:0.273,0.000:33:10,2,0:14,7,0:14:48,0,40,322,842,1164:250,0,255:19,0:1.3826e+01,1.8403e-01,4.3184e+01,3.2206e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,13,6,3:11,13,1,8 chr1 248813828 . A . PASS END=248813835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr1 248813836 . A . PASS END=248813836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 248813837 . G . PASS END=248813900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1016:0,85,255:40,0 chr1 248813901 . A T, 47.26 PASS DP=42;MQ=26.01;MQRankSum=4.415;ReadPosRankSum=-0.428;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:10,32,0:0.762,0.000:42:6,11,0:4,21,0:8:84,10,0,1067,368,1424:255,0,255:10,0:4.7261e+01,7.9276e+00,7.6328e-01,4.5000e+02,4.0030e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,1,21,11:7,3,14,18 chr1 248813902 . G . PASS END=248813941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,105,1298:0,106,255:40,0 chr1 248813942 . G . PASS END=248813942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr1 248813943 . C . PASS END=248813955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1279:0,89,255:35,0 chr1 248813956 . A . PASS END=248813956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr1 248813957 . T . PASS END=248813971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1333:0,87,255:40,0 chr1 248813972 . G A, 22.70 PASS DP=41;MQ=24.00;MQRankSum=2.585;ReadPosRankSum=3.613;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,15,0:0.366,0.000:41:12,6,0:14,9,0:23:57,0,39,536,913,1450:255,0,255:25,0:2.2697e+01,2.3656e-02,4.2357e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,3,8,7:15,11,9,6 chr1 248813973 . G . PASS END=248814012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,120,1800:0,122,255:40,0 chr1 248814013 . G . PASS END=248814051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,157,255:40,0 chr1 248814052 . T A, 36.93 PASS DP=87;MQ=27.24;MQRankSum=2.073;ReadPosRankSum=3.245;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:51,36,0:0.414,0.000:87:20,20,0:31,16,0:36:72,0,39,1288,1713,3001:255,0,255:40,0:3.6925e+01,1.1557e-03,4.2001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,26,14,22:26,25,16,20 chr1 248814053 . T . PASS END=248814079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:88:0,120,1800:0,231,255:40,0 chr1 248814080 . A C, 343.32 PASS DP=100;MQ=31.55;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,100,0:1.000,0.000:100:0,45,0:0,55,0:298:381,301,0,3872,301,3872:255,255,0:0,0:3.4332e+02,2.9797e+02,0.0000e+00,4.4853e+02,3.3274e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,45,55:0,0,54,46 chr1 248814081 . A . PASS END=248814125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:100:0,120,1800:0,255,255:40,0 chr1 248814126 . G A, 46.93 PASS DP=117;MQ=39.97;MQRankSum=4.547;ReadPosRankSum=6.091;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:64,53,0:0.453,0.000:117:32,25,0:32,28,0:42:82,0,41,1895,2289,4184:255,0,255:40,0:4.6931e+01,2.7103e-04,4.3750e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,39,20,33:31,33,34,19 chr1 248814127 . T . PASS END=248814163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:103:0,120,1800:0,255,255:40,0 chr1 248814164 . C . PASS END=248814185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:81:0,120,1800:0,223,255:40,0 chr1 248844670 . C . PASS END=248845057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:36:0,83,1296:0,83,255:40,2 chr1 248845058 . A . PASS END=248845058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:30,0 chr1 248845059 . A . PASS END=248845059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:38:0,93,1395:0,97,255:30,0 chr1 248845060 . C . PASS END=248845071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1274:0,84,255:33,0 chr1 248845072 . G . PASS END=248845072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1017:0,52,255:31,0 chr1 248845073 . T . PASS END=248845096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1317:0,95,255:38,0 chr1 248845097 . C T, 169.47 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,23,0:0,18,0:119:207,122,0,1494,122,1494:255,126,0:0,0:1.6947e+02,1.1947e+02,0.0000e+00,4.5000e+02,1.5424e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,26:0,0,25,16 chr1 248845098 . T . PASS END=248845134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:85:35:0,85,1230:0,85,255:38,0 chr1 248845135 . G . PASS END=248845183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:33:0,89,1190:0,89,255:38,0 chr1 248845184 . T . PASS END=248845184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr1 248845185 . G . PASS END=248845373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:37:0,91,1459:0,91,255:40,0 chr1 248845374 . T . PASS END=248845410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,137,255:40,0 chr1 248845411 . G A, 190.07 PASS DP=49;MQ=250.00;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,24,0:0,24,0:140:228,143,0,1756,143,1756:255,147,0:0,0:1.9007e+02,1.4007e+02,0.0000e+00,4.5000e+02,1.7484e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,30:0,0,22,26 chr1 248845412 . G . PASS END=248845457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:45:0,117,1755:0,131,255:40,0 chr1 248845458 . C T, 181.97 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,45,0:1.000,0.000:45:0,24,0:0,21,0:132:220,135,0,1708,135,1708:255,135,0:0,0:1.8197e+02,1.3197e+02,0.0000e+00,4.5000e+02,1.6674e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,22:0,0,20,25:248845458 chr1 248845459 . G . PASS END=248845470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,110,255:40,0 chr1 248845471 . T C, 170.39 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,41,0:1.000,0.000:41:0,21,0:0,20,0:120:208,123,0,1571,123,1571:255,123,0:0,0:1.7039e+02,1.2039e+02,0.0000e+00,4.5000e+02,1.5516e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,25:0,0,18,23:248845458 chr1 248845472 . G . PASS END=248845481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,108,1620:0,114,255:37,0 chr1 248845482 . G . PASS END=248845482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:36,0 chr1 248845483 . C . PASS END=248845498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1485:0,105,255:37,0 chr1 248845499 . A G, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,16,0:0,20,0:105:193,108,0,1391,108,1391:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,19:0,0,15,21 chr1 248845500 . C . PASS END=248845528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1185:0,80,255:35,0 chr1 248845529 . G . PASS END=248845536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,87,255:24,0 chr1 248845537 . C . PASS END=248845541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr1 248845542 . G . PASS END=248845542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:23,0 chr1 248845543 . C . PASS END=248845568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:24,0 chr1 248845569 . T . PASS END=248845569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr1 248845570 . C . PASS END=248845583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr1 248845584 . T . PASS END=248845587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr1 248845588 . T . PASS END=248845594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr1 248845595 . A . PASS END=248845595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr1 248845596 . G . PASS END=248845605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr1 248848799 . T . PASS END=248848800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:33,0 chr1 248848801 . A . PASS END=248848801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:31,0 chr1 248848802 . G . PASS END=248848807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:33,0 chr1 248848808 . T C, 139.83 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,13,0:0,18,0:90:178,93,0,1157,93,1157:255,99,0:0,0:1.3983e+02,8.9827e+01,0.0000e+00,4.5000e+02,1.2460e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,13:0,0,20,11 chr1 248848809 . A . PASS END=248848815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:33,0 chr1 248848816 . G . PASS END=248848816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1147:0,52,255:30,0 chr1 248848817 . A . PASS END=248848837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1160:0,99,255:34,0 chr1 248848838 . C . PASS END=248848838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:33,0 chr1 248848839 . C . PASS END=248848842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1221:0,86,255:34,0 chr1 248848843 . T . PASS END=248848843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1093:0,47,255:32,0 chr1 248848844 . G . PASS END=248848844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr1 248848845 . G . PASS END=248848848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1243:0,102,255:34,0 chr1 248848849 . A . PASS END=248848850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:33,0 chr1 248848851 . T . PASS END=248848853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr1 248848854 . T . PASS END=248848854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:32,0 chr1 248848855 . T C, 139.38 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,12,0:0,19,0:89:177,92,0,1143,92,1143:255,102,0:0,0:1.3938e+02,8.9382e+01,0.0000e+00,4.5000e+02,1.2415e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,20:0,0,16,15 chr1 248848856 . G . PASS END=248848866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:33,0 chr1 248848867 . T . PASS END=248848867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1083:0,63,255:26,0 chr1 248862148 . A . PASS END=248862206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,108,1620:0,140,255:40,0 chr1 248885481 . T . PASS END=248885506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:38:0,93,1366:0,93,255:40,0 chr1 248902912 . T . PASS END=248902952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:35,0 chr1 248902953 . A . PASS END=248902953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:32,0 chr1 248902954 . G . PASS END=248903006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1303:0,92,255:40,0 chr1 248903007 . T . PASS END=248903007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1426:0,65,255:35,0 chr1 248903008 . G . PASS END=248903097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1187:0,81,255:39,0 chr1 248903098 . G . PASS END=248903098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr1 248903099 . G . PASS END=248903099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr1 248903100 . C . PASS END=248903100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1298:0,70,255:34,0 chr1 248903101 . G . PASS END=248903138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,83,255:38,0 chr1 248903139 . T . PASS END=248903150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,945:0,60,255:24,0 chr1 249106099 . C . PASS END=249106101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 249106102 . C . PASS END=249106102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr1 249106103 . A . PASS END=249106179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,476:0,41,255:19,0 chr1 249106180 . C . PASS END=249106194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:21,0 chr1 249106195 . A . PASS END=249106195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 249106196 . C . PASS END=249106201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 249106202 . T . PASS END=249106202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr1 249106203 . G . PASS END=249106207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,748:0,66,255:22,0 chr1 249106208 . G . PASS END=249106208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr1 249106209 . A . PASS END=249106234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr1 249106235 . T . PASS END=249106235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr1 249106236 . C . PASS END=249106263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr1 249106264 . G . PASS END=249106268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:21:0,53,836:0,53,255:20,0 chr1 249106269 . G . PASS END=249106276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr1 249106277 . A . PASS END=249106277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:21,0 chr1 249106278 . G . PASS END=249106278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 249106279 . A . PASS END=249106279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr1 249106280 . C . PASS END=249106286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr1 249106287 . T . PASS END=249106287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr1 249106288 . A . PASS END=249106292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 249106293 . T . PASS END=249106293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr1 249106294 . G . PASS END=249106298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 249106299 . G . PASS END=249106299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr1 249106300 . G . PASS END=249106305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr1 249106306 . G . PASS END=249106306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 249106307 . C . PASS END=249106329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,65,255:25,0 chr1 249106330 . C . PASS END=249106338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr1 249106339 . C . PASS END=249106339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr1 249106340 . G . PASS END=249106341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 249106342 . A . PASS END=249106406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:26,0 chr1 249106407 . C . PASS END=249106428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:17:0,43,660:0,43,255:19,0 chr1 249106429 . C . PASS END=249106429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:14,0 chr1 249106430 . A . PASS END=249106432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 249106433 . G . PASS END=249106433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr1 249106434 . G . PASS END=249106434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr1 249106435 . G . PASS END=249106435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr1 249106436 . T . PASS END=249106458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr1 249106459 . C . PASS END=249106459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr1 249106460 . C . PASS END=249106465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr1 249106466 . T . PASS END=249106475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:9,0 chr1 249106476 . C . LowGQ END=249106476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:8,0 chr1 249106477 . G . PASS END=249106479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:11,0 chr1 249106480 . G . PASS END=249106516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr1 249106517 . G . PASS END=249106526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr1 249106527 . G . PASS END=249106527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 249106528 . A . PASS END=249106538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr1 249106539 . G . PASS END=249106539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 249106540 . C . PASS END=249106544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 249106545 . G . PASS END=249106569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr1 249107188 . C . PASS END=249107191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr1 249107192 . A . PASS END=249107192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 249107193 . G . PASS END=249107201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,521:0,42,255:16,0 chr1 249107202 . T . PASS END=249107203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr1 249107204 . A . PASS END=249107204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr1 249107205 . A . PASS END=249107205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 249107206 . C . PASS END=249107213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr1 249107214 . T . PASS END=249107214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr1 249107215 . G . PASS END=249107221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:18,0 chr1 249107222 . A . PASS END=249107224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr1 249107225 . T . PASS END=249107225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr1 249107226 . A . PASS END=249107252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:26,0 chr1 249107253 . G . PASS END=249107358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1012:0,80,255:35,0 chr1 249107359 . C . PASS END=249107360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr1 249107361 . C . PASS END=249107383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1202:0,83,255:32,0 chr1 249107384 . G . PASS END=249107385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr1 249107386 . G . PASS END=249107389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr1 249107390 . G . PASS END=249107397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr1 249108648 . C . PASS END=249108657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr1 249108658 . G . PASS END=249108666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:31,0 chr1 249108667 . A . PASS END=249108667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr1 249108668 . G . PASS END=249108711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:32:0,93,1356:0,96,255:38,0 chr1 249108712 . A . PASS END=249108712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1158:0,53,255:30,0 chr1 249108713 . C . PASS END=249108738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1136:0,88,255:34,0 chr1 249108739 . T . PASS END=249108739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:30,0 chr1 249108740 . C . PASS END=249108740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr1 249108741 . T . PASS END=249108741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:29,0 chr1 249108742 . C . PASS END=249108747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1257:0,89,255:32,0 chr1 249108748 . G . PASS END=249108748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:30,0 chr1 249108749 . C . PASS END=249108757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1395:0,96,255:32,0 chr1 249108758 . T . PASS END=249108774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:25:0,66,990:0,75,255:26,0 chr1 249108775 . T . PASS END=249108776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr1 249108777 . C . PASS END=249108779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:23,0 chr1 249108780 . C . PASS END=249108780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:21,0 chr1 249108781 . A . PASS END=249108787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:22,0 chr1 249108788 . C . PASS END=249108788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr1 249108789 . C . PASS END=249108798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:24,0 chr1 249108799 . T . PASS END=249108799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr1 249108800 . C . PASS END=249108801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr1 249108802 . T . PASS END=249108802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr1 249108803 . G . PASS END=249108809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr1 249108910 . T . PASS END=249108927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr1 249110733 . C . PASS END=249110733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr1 249110734 . T . PASS END=249110744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr1 249110745 . C . PASS END=249110745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr1 249110746 . C . PASS END=249110825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1086:0,80,255:37,0 chr1 249110826 . C . PASS END=249110827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 249110828 . C . PASS END=249110838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:28,0 chr1 249110839 . C . PASS END=249110840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 249110841 . C . PASS END=249110843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 249110844 . A . PASS END=249110861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,878:0,72,255:26,0 chr1 249111021 . A . PASS END=249111083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:37:0,84,1238:0,84,255:40,0 chr1 249111184 . C . PASS END=249111270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:96:44:0,96,1440:0,119,255:40,0 chr1 249118952 . C . PASS END=249119134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:34:0,87,1305:0,102,255:40,0 chr1 249141474 . A . PASS END=249141485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,576:0,40,255:19,0 chr1 249141486 . T . PASS END=249141502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr1 249141503 . G . PASS END=249141508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 249141509 . G . PASS END=249141509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 249141510 . C . PASS END=249141522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr1 249141523 . G . PASS END=249141546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,711:0,63,255:22,0 chr1 249141547 . A . PASS END=249141566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:19:0,42,630:0,47,255:19,0 chr1 249141567 . C . PASS END=249141567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr1 249141568 . A . PASS END=249141570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 249141571 . A . PASS END=249141571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr1 249141572 . A . PASS END=249141578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr1 249141579 . C . PASS END=249141603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:12,0 chr1 249141604 . G . PASS END=249141604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr1 249141605 . C . PASS END=249141605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr1 249141606 . C . PASS END=249141609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 249141610 . A . PASS END=249141610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr1 249141611 . A . PASS END=249141614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 249141615 . G . PASS END=249141622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr1 249141623 . C . PASS END=249141624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 249141625 . G . PASS END=249141664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr1 249141665 . T . PASS END=249141668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr1 249141669 . G . PASS END=249141674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr1 249141675 . A . PASS END=249141697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr1 249141698 . C . PASS END=249141698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 249141699 . G . PASS END=249141770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:12,0 chr1 249141771 . C . PASS END=249141771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 249141772 . C . PASS END=249141795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr1 249141796 . T . PASS END=249141796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr1 249141797 . C . PASS END=249141804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr1 249141805 . T . PASS END=249141807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 249141808 . C . PASS END=249141818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 249141819 . C . PASS END=249141820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249141821 . A . PASS END=249141869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,598:0,45,255:17,0 chr1 249141870 . T . PASS END=249141870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 249141871 . G . PASS END=249141871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249141872 . C . LowGQ END=249141872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,426:30,0,255:12,0 chr1 249141873 . G . PASS END=249141873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 249141874 . C . LowGQ END=249141874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,410:38,0,255:12,0 chr1 249141875 . C . PASS END=249141876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,520:0,31,255:14,0 chr1 249141877 . G . PASS END=249141877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,496:0,17,255:13,0 chr1 249141878 . C . PASS END=249141878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr1 249141879 . A . LowGQ END=249141879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,396:38,0,255:11,0 chr1 249141880 . C . PASS END=249141881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr1 249141882 . T . PASS END=249141882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,502:0,4,255:12,0 chr1 249141883 . T . PASS END=249141883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:12,0 chr1 249141884 . C . PASS END=249141884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:14,0 chr1 249141885 . C . PASS END=249141885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr1 249141886 . G . LowGQ END=249141886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,502:18,0,255:12,0 chr1 249141887 . G . PASS END=249141888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:14,0 chr1 249141889 . A . PASS END=249141889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,463:0,1,255:12,0 chr1 249141890 . G . PASS END=249141890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:14,0 chr1 249141891 . A . PASS END=249141891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr1 249141892 . G . PASS END=249141893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 249141894 . G . PASS END=249141894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr1 249141895 . C . PASS END=249141895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249141896 . G . PASS END=249141896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr1 249141897 . C . PASS END=249141897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr1 249141898 . T . LowGQ END=249141898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,416:5,0,255:12,0 chr1 249141899 . G . PASS END=249141899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr1 249141900 . C . LowGQ END=249141901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,347:0,0,255:13,0 chr1 249141902 . C . PASS END=249141902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 249141903 . T . LowGQ END=249141903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,455:2,0,255:13,0 chr1 249141904 . T . PASS END=249141904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 249141905 . C . PASS END=249141905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr1 249141906 . C . PASS END=249141906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 249141907 . A . PASS END=249141907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr1 249141908 . C . PASS END=249141909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 249141910 . A . PASS END=249141910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr1 249141911 . G . LowGQ END=249141912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,372:7,0,255:13,0 chr1 249141913 . C . PASS END=249141913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr1 249141914 . G . PASS END=249141915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249141916 . G . PASS END=249141916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr1 249141917 . G . LowGQ END=249141917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,426:2,0,255:13,0 chr1 249141918 . G . PASS END=249141918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249141919 . C . PASS END=249141920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr1 249141921 . C . PASS END=249141921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249141922 . A . PASS END=249141947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:18,0 chr1 249141948 . G . PASS END=249141948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr1 249141949 . C . PASS END=249141960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr1 249141961 . A . PASS END=249141981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:13,0 chr1 249141982 . G . PASS END=249141984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249141985 . C . PASS END=249141985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 249141986 . C . PASS END=249141986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249141987 . T . PASS END=249141987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 249141988 . T . PASS END=249141990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249141991 . G . PASS END=249141991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr1 249141992 . A . PASS END=249141997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr1 249141998 . C . PASS END=249141998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr1 249141999 . G . PASS END=249142020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr1 249142021 . G . PASS END=249142021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr1 249142022 . C . PASS END=249142035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,449:0,36,255:12,0 chr1 249142036 . G . PASS END=249142036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr1 249142037 . G . PASS END=249142039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr1 249142040 . C . PASS END=249142040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr1 249142041 . C . PASS END=249142063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,369:0,39,255:13,0 chr1 249142064 . C . PASS END=249142071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:12:0,23,405:0,23,255:9,0 chr1 249142072 . A . PASS END=249142106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr1 249142107 . T . PASS END=249142107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr1 249142108 . C . PASS END=249142146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:12,0 chr1 249142147 . A . PASS END=249142236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr1 249142237 . A . PASS END=249142251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr1 249142252 . G . PASS END=249142254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr1 249142255 . G . PASS END=249142255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr1 249142256 . A . PASS END=249142268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr1 249142269 . G . PASS END=249142377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,149:0,12,149:6,0 chr1 249142378 . A . PASS END=249142394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr1 249142395 . G . PASS END=249142395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr1 249142396 . A . PASS END=249142405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:9,0 chr1 249142406 . C . PASS END=249142406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr1 249142407 . G . PASS END=249142416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr1 249142417 . A . PASS END=249142417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249142418 . G . PASS END=249142420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr1 249142421 . C . PASS END=249142421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr1 249142422 . G . PASS END=249142433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:10,0 chr1 249142434 . A . PASS END=249142440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249142441 . G . PASS END=249142466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:13,0 chr1 249142467 . A . PASS END=249142468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 249142469 . G . PASS END=249142481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:15,0 chr1 249142482 . A . PASS END=249142483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr1 249142484 . G . PASS END=249142487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249142488 . T . PASS END=249142491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 249142492 . G . PASS END=249142506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,584:0,48,255:17,0 chr1 249142507 . G . PASS END=249142507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr1 249142508 . C . PASS END=249142515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,597:0,51,255:17,0 chr1 249142516 . T . PASS END=249142516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr1 249142517 . C . PASS END=249142520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr1 249142521 . T . PASS END=249142521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr1 249142522 . G . PASS END=249142535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,660:0,54,255:18,0 chr1 249142536 . A . PASS END=249142536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr1 249142537 . A . PASS END=249142544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr1 249142545 . C . PASS END=249142545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr1 249142546 . G . PASS END=249142550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr1 249142551 . A . PASS END=249142551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr1 249142552 . A . PASS END=249142565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr1 249142566 . A . PASS END=249142566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr1 249142567 . A . PASS END=249142575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr1 249142576 . A . PASS END=249142586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr1 249142587 . T . PASS END=249142587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr1 249142588 . G . PASS END=249142595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr1 249142596 . G . PASS END=249142596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr1 249142597 . C . PASS END=249142605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr1 249142606 . T . PASS END=249142606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr1 249142607 . C . PASS END=249142617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr1 249142618 . T . PASS END=249142619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 249142620 . G . PASS END=249142629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr1 249142630 . G . PASS END=249142638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr1 249142639 . A . PASS END=249142664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr1 249142665 . G . LowGQ END=249142665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:10,0 chr1 249142666 . C . PASS END=249142672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:13,0 chr1 249142673 . C . PASS END=249142673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr1 249142674 . G . PASS END=249142685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr1 249142686 . A . PASS END=249142687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr1 249142688 . C . PASS END=249142720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr1 249142721 . C . PASS END=249142726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249142727 . G . PASS END=249142731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr1 249142732 . C . PASS END=249142732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 249142733 . C . PASS END=249142759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr1 249142760 . G . PASS END=249142762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr1 249142763 . C . PASS END=249142763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr1 249142764 . G . PASS END=249142767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr1 249142768 . T . PASS END=249142768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr1 249142769 . G . PASS END=249142778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr1 249142779 . C . PASS END=249142779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:16,0 chr1 249142780 . T . PASS END=249142825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,592:0,45,255:18,0 chr1 249142826 . G . PASS END=249142831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 249142832 . G . PASS END=249142832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr1 249144409 . T . PASS END=249144411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr1 249144412 . T . PASS END=249144425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 249144426 . G . PASS END=249144433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,698:0,44,255:19,0 chr1 249144434 . G . PASS END=249144438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr1 249144439 . A . PASS END=249144439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr1 249144440 . G . PASS END=249144446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,847:0,69,255:26,0 chr1 249144447 . C . PASS END=249144447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr1 249144448 . A . PASS END=249144451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr1 249144452 . G . PASS END=249144467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:28,0 chr1 249144468 . T . PASS END=249144472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 249144473 . C . PASS END=249144475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 249144476 . A . PASS END=249144494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr1 249144495 . T . PASS END=249144495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 249144496 . G . PASS END=249144496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr1 249144497 . C . PASS END=249144500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr1 249144501 . G . PASS END=249144501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr1 249144502 . A . PASS END=249144503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr1 249144504 . A . PASS END=249144504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 249144505 . G . PASS END=249144553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1132:0,83,255:32,0 chr1 249144554 . G . PASS END=249144554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr1 249144555 . G . PASS END=249144558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr1 249144559 . A . PASS END=249144559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 249144560 . C . PASS END=249144563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 249144564 . T . PASS END=249144566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 249144567 . T . PASS END=249144573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr1 249144574 . G . PASS END=249144578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:22,0 chr1 249144579 . C . PASS END=249144591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr1 249144592 . C . PASS END=249144599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr1 249144600 . A . PASS END=249144601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 249144602 . C . PASS END=249144609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 249144610 . G . PASS END=249144639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,706:0,57,255:19,0 chr1 249144640 . C . PASS END=249144641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr1 249144642 . C . PASS END=249144645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,56,255:19,0 chr1 249144646 . C . PASS END=249144648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 249144649 . T . PASS END=249144660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,56,255:18,0 chr1 249144661 . C . PASS END=249144666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr1 249144667 . C . PASS END=249144669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 249144670 . G . PASS END=249144687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr1 249144688 . G . PASS END=249144688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr1 249144689 . C . PASS END=249144690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr1 249144691 . G . PASS END=249144715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,684:0,54,255:19,0 chr1 249144881 . T . PASS END=249144980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,157,255:40,0 chr1 249145103 . T . PASS END=249145113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr1 249145114 . C . PASS END=249145114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1049:0,33,255:31,0 chr1 249145115 . C . PASS END=249145118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:35,0 chr1 249145119 . T . PASS END=249145119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1100:0,42,255:31,0 chr1 249145120 . C . PASS END=249145120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:33,0 chr1 249145121 . A . PASS END=249145129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1191:0,91,255:36,0 chr1 249145130 . G . PASS END=249145130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:30,0 chr1 249145131 . T . PASS END=249145132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr1 249145133 . T . PASS END=249145135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1170:0,78,255:30,0 chr1 249145136 . A . PASS END=249145136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1235:0,56,255:25,0 chr1 249145137 . C . PASS END=249145137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr1 249145138 . C . PASS END=249145142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,86,255:26,0 chr1 249145143 . T . PASS END=249145143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1094:0,47,255:24,0 chr1 249145144 . T . PASS END=249145146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,85,255:24,0 chr1 249148136 . C . PASS END=249148250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,120,1800:0,126,255:40,0 chr1 249149579 . A . PASS END=249149657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:35:0,92,1209:0,92,255:40,0 chr1 249149757 . C . PASS END=249149757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr1 249149758 . T . PASS END=249149758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:28,0 chr1 249149759 . A . PASS END=249149765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr1 249149766 . T . PASS END=249149766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr1 249149767 . T . PASS END=249149768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr1 249149769 . G . PASS END=249149769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr1 249149770 . G . PASS END=249149776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr1 249149777 . T . PASS END=249149777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr1 249149778 . T . PASS END=249149779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr1 249149780 . T . PASS END=249149781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr1 249149782 . C . PASS END=249149783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr1 249149784 . G . PASS END=249149785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 249149786 . G . PASS END=249149804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr1 249149805 . G . PASS END=249149834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:26,0 chr1 249149924 . C . PASS END=249149932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr1 249149933 . G . PASS END=249149938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 249149939 . G . PASS END=249149940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 249149941 . C . PASS END=249149946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 249149947 . G . PASS END=249149947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr1 249149948 . G . PASS END=249149958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr1 249149959 . G . PASS END=249149960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:24:0,44,823:0,44,255:24,0 chr1 249149961 . T . PASS END=249149962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr1 249149963 . C . PASS END=249149977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr1 249149978 . T . PASS END=249149978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr1 249149979 . G . PASS END=249149982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr1 249149983 . C . PASS END=249149983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr1 249149984 . C . PASS END=249149994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr1 249149995 . A . PASS END=249149995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr1 249149996 . G . PASS END=249150017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1249:0,89,255:35,0 chr1 249150018 . A . PASS END=249150018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:33,0 chr1 249150019 . T . PASS END=249150114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:36:0,93,1364:0,97,255:40,0 chr1 249150115 . A . PASS END=249150115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1191:0,69,255:30,0 chr1 249150116 . G . PASS END=249150140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:32,0 chr1 249150141 . C . PASS END=249150145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:26,0 chr1 249150487 . T . PASS END=249150621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,107,1435:0,107,255:40,0 chr1 249150713 . C . PASS END=249150761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:35:0,88,1227:0,88,255:40,0 chr1 249151433 . C . PASS END=249151433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr1 249151434 . T . PASS END=249151434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr1 249151435 . G . PASS END=249151435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr1 249151436 . C . PASS END=249151436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr1 249151437 . A . PASS END=249151449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:17,0 chr1 249151450 . C . PASS END=249151453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr1 249151454 . T . PASS END=249151469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr1 249151470 . A . PASS END=249151482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:22,0 chr1 249151483 . G . PASS END=249151483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr1 249151484 . T . PASS END=249151514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,917:0,64,255:26,0 chr1 249151515 . T . PASS END=249151515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr1 249151516 . G . PASS END=249151548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,750:0,61,255:24,0 chr1 249151549 . A . PASS END=249151549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,768:0,33,255:19,0 chr1 249151550 . A . PASS END=249151560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 249151561 . G . PASS END=249151585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr1 249151586 . C . PASS END=249151589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr1 249151590 . T . PASS END=249151603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,714:0,57,255:19,0 chr1 249151604 . C . PASS END=249151614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr1 249151615 . G . PASS END=249151615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 249151616 . G . PASS END=249151619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 249151620 . C . PASS END=249151621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:53:23:0,53,828:0,53,255:21,0 chr1 249151622 . G . PASS END=249151641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr1 249151642 . G . LowGQ END=249151642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:0:24:0,0,753:5,0,255:21,0 chr1 249151643 . C . PASS END=249151645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr1 249151646 . G . PASS END=249151647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,798:0,53,255:21,0 chr1 249151648 . G . PASS END=249151648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 249151649 . A . PASS END=249151649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr1 249151650 . C . PASS END=249151650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 249151651 . A . PASS END=249151651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr1 249151652 . A . PASS END=249151659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr1 249151660 . A . PASS END=249151660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr1 249151661 . G . PASS END=249151661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr1 249151662 . A . PASS END=249151662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr1 249151663 . T . PASS END=249151663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 249151664 . A . PASS END=249151664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr1 249151665 . C . PASS END=249151668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 249151669 . A . PASS END=249151696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr1 249151938 . T . PASS END=249151952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr1 249151953 . A . PASS END=249151953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr1 249151954 . A . PASS END=249151974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:18,0 chr1 249151975 . C . PASS END=249151975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr1 249151976 . C . PASS END=249151996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,698:0,57,255:19,0 chr1 249151997 . G . PASS END=249151997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 249151998 . G . PASS END=249151998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 249151999 . C . PASS END=249151999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 249152000 . T . PASS END=249152000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr1 249152001 . C . PASS END=249152025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:26,0 chr1 249152026 . C . PASS END=249152028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr1 249152029 . G . PASS END=249152033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr1 249152034 . G . PASS END=249152090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1202:0,84,255:35,0 chr1 249152091 . A . PASS END=249152091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr1 249152092 . G . PASS END=249152124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:30:0,86,1125:0,86,255:34,0 chr1 249152125 . A . PASS END=249152125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:28,0 chr1 249152126 . C . PASS END=249152128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1271:0,89,255:30,0 chr1 249152153 . C . PASS END=249152179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1200:0,83,255:32,0 chr1 249152180 . G . PASS END=249152180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:29,0 chr1 249152181 . C . PASS END=249152222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:30:0,86,1088:0,86,255:31,0 chr1 249152223 . A . PASS END=249152223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr1 249152224 . A . PASS END=249152225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr1 249152226 . T . PASS END=249152228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1078:0,60,255:28,0 chr1 249152229 . G . PASS END=249152229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 249152230 . A . PASS END=249152248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:26,0 chr1 249152249 . A . PASS END=249152249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,805:0,58,255:21,0 chr1 249152250 . G . PASS END=249152254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr1 249152255 . A . PASS END=249152256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:25:0,47,884:0,47,255:23,0 chr1 249152257 . G . PASS END=249152257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr1 249152258 . A . PASS END=249152258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:22,0 chr1 249152259 . C . PASS END=249152260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr1 249152261 . G . PASS END=249152261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr1 249152262 . G . PASS END=249152264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr1 249152330 . C . PASS END=249152330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr1 249152331 . G . PASS END=249152338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr1 249152339 . A . PASS END=249152339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr1 249152340 . G . PASS END=249152420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1116:0,83,255:38,0 chr1 249152421 . G . PASS END=249152421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr1 249152422 . G . PASS END=249152449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1139:0,87,255:30,0 chr1 249152450 . A . PASS END=249152470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr1 249152471 . C . PASS END=249152471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr1 249152472 . G . PASS END=249152473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr1 249152474 . C . PASS END=249152479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 249152480 . G . PASS END=249152481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr1 249152482 . C . PASS END=249152482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 249152483 . A . PASS END=249152504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr1 249152505 . C . PASS END=249152505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr1 249152506 . C . PASS END=249152507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr1 249152508 . T . PASS END=249152520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,66,255:18,0 chr1 249152711 . C . PASS END=249152713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,117,1755:0,129,255:39,0 chr1 249153117 . C . PASS END=249153117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr1 249153118 . T . LowGQ END=249153120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:8:0,0,155:6,0,164:7,0 chr1 249153121 . G . PASS END=249153123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249153124 . C . PASS END=249153124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr1 249153125 . C . PASS END=249153128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249153129 . A . LowGQ END=249153129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,202:25,0,228:8,0 chr1 249153130 . C . PASS END=249153130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249153131 . G . LowGQ END=249153131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,133:86,0,219:7,0 chr1 249153132 . C . PASS END=249153132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr1 249153133 . G . PASS END=249153133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:8,0 chr1 249153134 . C . PASS END=249153136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr1 249153137 . T . LowGQ END=249153137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,266:20,0,255:9,0 chr1 249153138 . C . PASS END=249153138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 249153139 . A . PASS END=249153139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,349:0,9,255:11,0 chr1 249153140 . C . PASS END=249153146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr1 249153147 . T . LowGQ END=249153147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,319:16,0,255:10,0 chr1 249153148 . G . LowGQ END=249153148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,316:25,0,255:9,0 chr1 249153149 . C . PASS END=249153149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr1 249153150 . G . PASS END=249153150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr1 249153151 . C . PASS END=249153152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr1 249153153 . T . LowGQ END=249153154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:14:0,0,382:0,0,255:12,0 chr1 249153155 . C . PASS END=249153155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr1 249153156 . G . LowGQ END=249153156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:19,0,255:11,0 chr1 249153157 . C . PASS END=249153158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr1 249153159 . T . LowGQ END=249153160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,377:0,0,255:12,0 chr1 249153161 . C . PASS END=249153161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr1 249153162 . G . PASS END=249153163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,457:0,25,255:13,0 chr1 249153164 . C . PASS END=249153164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr1 249153165 . T . LowGQ END=249153165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,402:24,0,255:13,0 chr1 249153166 . C . PASS END=249153166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr1 249153167 . C . PASS END=249153167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 249153168 . C . PASS END=249153168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr1 249153169 . G . LowGQ END=249153169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,443:29,0,255:14,0 chr1 249153170 . G . PASS END=249153172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr1 249153173 . C . PASS END=249153176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,504:0,31,255:16,0 chr1 249153177 . C . PASS END=249153177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 249153178 . G . PASS END=249153178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr1 249153179 . A . PASS END=249153179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr1 249153180 . G . PASS END=249153180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,535:0,20,255:16,0 chr1 249153181 . C . PASS END=249153181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 249153182 . A . PASS END=249153182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr1 249153183 . G . PASS END=249153183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr1 249153184 . G . PASS END=249153184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr1 249153185 . C . PASS END=249153187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:17,0 chr1 249153188 . G . PASS END=249153188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr1 249153189 . G . PASS END=249153220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,638:0,41,255:19,0 chr1 249153221 . G . PASS END=249153221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr1 249153222 . C . PASS END=249153226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr1 249153227 . C . PASS END=249153227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr1 249153228 . G . PASS END=249153241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:18,0 chr1 249153242 . A . PASS END=249153242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr1 249153243 . A . PASS END=249153247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr1 249153248 . C . PASS END=249153249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr1 249153250 . G . PASS END=249153257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr1 249153258 . C . PASS END=249153272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr1 249153273 . T . PASS END=249153274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr1 249153275 . G . PASS END=249153279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr1 249153280 . G . PASS END=249153297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,560:0,48,255:16,0 chr1 249153298 . C . PASS END=249153298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr1 249153299 . A . PASS END=249153333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,621:0,51,255:19,0 chr1 249153334 . C . PASS END=249153356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr1 249153357 . A . PASS END=249153357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:21,0 chr1 249153358 . A . PASS END=249153369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,792:0,66,255:24,0 chr1 249153370 . A . PASS END=249153370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr1 249153371 . A . PASS END=249153391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,856:0,72,255:26,0 chr1 249153392 . T . PASS END=249153420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,996:0,81,255:29,0 chr1 249153421 . C . PASS END=249153493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr1 249153494 . A . PASS END=249153494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr1 249153495 . C . PASS END=249153497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr1 249153498 . G . PASS END=249153498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:24,0 chr1 249153499 . G . PASS END=249153511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr1 249153512 . T . PASS END=249153512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr1 249153513 . G . PASS END=249153514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr1 249153515 . T . PASS END=249153515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:20,0 chr1 249153516 . C . PASS END=249153518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 249153519 . A . PASS END=249153519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 249153520 . C . PASS END=249153531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr1 249153532 . C . PASS END=249153532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 249153533 . G . PASS END=249153554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr1 249153555 . C . PASS END=249153555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr1 249153556 . T . PASS END=249153566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr1 249153567 . C . PASS END=249153604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,675:0,44,255:19,0 chr1 249153605 . C . PASS END=249153605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr1 249153606 . C . PASS END=249153614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr1 249153615 . A . PASS END=249153618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,454:0,31,255:13,0 chr1 249208062 . A . PASS END=249208078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:64:0,120,1800:0,157,255:40,0 chr1 249208751 . A . PASS END=249208758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,171,255:40,0 chr1 249210801 . A . PASS END=249211004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:81:32:0,81,1174:0,86,255:40,0 chr1 249211005 . G . PASS END=249211006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 249211007 . T . PASS END=249211009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr1 249211010 . A . PASS END=249211014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,89,255:26,0 chr1 249211015 . T . PASS END=249211018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr1 249211019 . T . PASS END=249211029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,70,255:25,0 chr1 249211030 . G . PASS END=249211031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr1 249211032 . C . PASS END=249211033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:20,0 chr1 249211034 . C . PASS END=249211036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr1 249211037 . G . PASS END=249211045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr1 249211046 . A . PASS END=249211046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr1 249211047 . G . PASS END=249211047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:21,0 chr1 249211048 . G . PASS END=249211048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr1 249211049 . A . PASS END=249211049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr1 249211050 . T . PASS END=249211050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,703:0,30,255:22,0 chr1 249211051 . A . PASS END=249211051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr1 249211052 . A . PASS END=249211052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr1 249211053 . T . PASS END=249211055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr1 249211056 . C . PASS END=249211056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr1 249211057 . G . PASS END=249211058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,784:0,30,255:21,0 chr1 249211059 . C . PASS END=249211059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr1 249211060 . C . PASS END=249211060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr1 249211061 . T . PASS END=249211063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr1 249211064 . A . PASS END=249211064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:19,0 chr1 249211065 . G . PASS END=249211065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr1 249211066 . C . PASS END=249211066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:20,0 chr1 249211067 . T . PASS END=249211068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:20,0 chr1 249211069 . C . PASS END=249211069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr1 249211070 . A . PASS END=249211071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr1 249211072 . C . PASS END=249211072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr1 249211073 . C . PASS END=249211075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:21:0,30,692:0,30,255:19,0 chr1 249211076 . C . PASS END=249211080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr1 249211081 . A . PASS END=249211081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,646:0,24,255:18,0 chr1 249211082 . A . PASS END=249211083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr1 249211084 . A . PASS END=249211089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,596:0,21,255:18,0 chr1 249211090 . A . PASS END=249211093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr1 249211094 . C . PASS END=249211094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr1 249211095 . A . PASS END=249211095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr1 249211096 . G . PASS END=249211097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr1 249211098 . T . PASS END=249211098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 249211099 . G . PASS END=249211099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr1 249211100 . T . PASS END=249211102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 249211103 . A . PASS END=249211104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr1 249211105 . C . PASS END=249211124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr1 249211125 . A . PASS END=249211130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr1 249211131 . T . PASS END=249211132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 249211133 . T . PASS END=249211134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr1 249211135 . C . PASS END=249211137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr1 249211138 . C . PASS END=249211153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr1 249211154 . G . PASS END=249211159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:17:0,33,495:0,41,255:13,0 chr1 249211160 . C . PASS END=249211166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr1 249211167 . T . PASS END=249211168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr1 249211169 . C . PASS END=249211182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,623:0,43,255:19,0 chr1 249211183 . C . PASS END=249211188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr1 249211189 . A . PASS END=249211189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr1 249211190 . G . PASS END=249211192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr1 249211193 . A . PASS END=249211193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr1 249211194 . A . PASS END=249211197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr1 249211198 . C . PASS END=249211198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr1 249211199 . T . PASS END=249211199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:20,0 chr1 249211200 . G . PASS END=249211224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,826:0,64,255:26,0 chr1 249211225 . T . PASS END=249211226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:27,1 chr1 249211227 . T . PASS END=249211232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr1 249211233 . T . PASS END=249211249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,909:0,64,255:26,0 chr1 249211250 . T . PASS END=249211250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:24,0 chr1 249211251 . C . PASS END=249211252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr1 249211253 . T . PASS END=249211253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:24,0 chr1 249211254 . T . PASS END=249211254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr1 249211255 . G . PASS END=249211255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr1 249211256 . T . PASS END=249211269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,906:0,62,255:30,0 chr1 249211270 . C . PASS END=249211281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:30,0 chr1 249211282 . C . PASS END=249211282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr1 249211283 . A . PASS END=249211283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr1 249211284 . G . PASS END=249211284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr1 249211285 . A . PASS END=249211289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1044:0,93,255:31,0 chr1 249211290 . T . PASS END=249211290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr1 249211291 . G . PASS END=249211299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:32:0,92,1288:0,92,255:35,0 chr1 249211300 . A . PASS END=249211300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:31,0 chr1 249211301 . G . PASS END=249211951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:36:0,86,1352:0,86,255:40,1 chr1 249211952 . T . PASS END=249211953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1282:0,72,255:36,1 chr1 249211954 . A . PASS END=249211968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1260:0,84,255:39,0 chr1 249211969 . G . PASS END=249211969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1219:0,70,255:35,0 chr1 249211970 . G . PASS END=249211981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1329:0,87,255:38,0 chr1 249211982 . A . PASS END=249211982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1277:0,65,255:35,0 chr1 249211983 . C . PASS END=249212244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1260:0,88,255:40,0 chr1 249212245 . G . PASS END=249212245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr1 249212246 . G . PASS END=249212246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr1 249212247 . C . PASS END=249212247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr1 249212248 . T . PASS END=249212251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 249212252 . T . PASS END=249212252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr1 249212253 . C . PASS END=249212254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr1 249212255 . T . PASS END=249212262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:29:0,66,990:0,74,255:26,0 chr1 249212263 . G . PASS END=249212267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1186:0,83,255:29,0 chr1 249212268 . C . PASS END=249212276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr1 249212277 . A . PASS END=249212277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr1 249212278 . T . PASS END=249212292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,922:0,62,255:24,0 chr1 249212293 . A . PASS END=249212294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr1 249212295 . C . PASS END=249212310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,894:0,72,255:26,0 chr1 249212311 . C . PASS END=249212315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr1 249212316 . G . PASS END=249212316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr1 249212317 . G . PASS END=249212317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr1 249212318 . A . PASS END=249212318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr1 249212319 . C . PASS END=249212319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr1 249212320 . C . PASS END=249212360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,901:0,65,255:26,0 chr1 249212361 . G . PASS END=249212369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr1 249212370 . T . PASS END=249212370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr1 249212371 . G . PASS END=249212373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr1 249212374 . A . PASS END=249212374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr1 249212375 . C . PASS END=249212399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:31,0 chr1 249212400 . G . PASS END=249212400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr1 249212401 . C . PASS END=249212487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1225:0,86,255:33,0 chr1 249212488 . C . PASS END=249212488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:32,0 chr1 249212489 . A . PASS END=249212505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1188:0,85,255:33,0 chr1 249212506 . G . PASS END=249212508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr1 249212509 . A . PASS END=249212511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr1 249212512 . T . PASS END=249212513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr1 249212514 . C . PASS END=249212534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr1 249212535 . A . PASS END=249212559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr1 249212560 . T . PASS END=249212562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 41608 . T . PASS END=41627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,197,255:40,0 chr2 42848 . C . PASS END=42849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 42850 . A . PASS END=42870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 42871 . C . PASS END=42872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 42873 . G . PASS END=42880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 42881 . A . PASS END=42881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr2 42882 . G . PASS END=42884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 42885 . C . PASS END=42885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 42886 . A . PASS END=42904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:17,0 chr2 42905 . A . PASS END=42905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:16,0 chr2 42906 . C . PASS END=42910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 42911 . T . PASS END=42911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 42912 . C . PASS END=42948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,582:0,45,255:18,0 chr2 42959 . T . PASS END=42981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr2 42982 . G . PASS END=42998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr2 42999 . G . LowGQ END=42999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr2 43000 . T . PASS END=43004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr2 43005 . T . PASS END=43008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 43009 . C . PASS END=43016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 43017 . C . PASS END=43040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 43041 . T . PASS END=43054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 43055 . C . PASS END=43056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 43057 . G . PASS END=43065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 45390 . T . PASS END=45404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1365:0,98,255:36,0 chr2 45405 . C . PASS END=45405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 45406 . G . PASS END=45468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:30:0,81,1215:0,90,255:36,0 chr2 45469 . G . PASS END=45483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr2 45484 . T . PASS END=45504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:16:0,42,630:0,48,255:17,0 chr2 45505 . A . PASS END=45518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 45519 . C . PASS END=45525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 45526 . A . PASS END=45537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 45538 . G . PASS END=45546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,629:0,45,255:17,0 chr2 45547 . A . PASS END=45547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 45548 . C . PASS END=45567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 45568 . T . PASS END=45594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 45595 . C . PASS END=45597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 45598 . T . PASS END=45598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 45599 . G . PASS END=45599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 45600 . C . PASS END=45610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,366:0,30,255:11,0 chr2 45611 . C . PASS END=45624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr2 45625 . G . PASS END=45634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 45635 . C . PASS END=45644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 45645 . C . PASS END=45645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 45646 . T . PASS END=45646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 45647 . T . PASS END=45656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 45657 . A . PASS END=45657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 45658 . C . PASS END=45666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 45667 . C . PASS END=45667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 45668 . C . PASS END=45670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr2 45671 . C . PASS END=45671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 45672 . G . PASS END=45673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 45674 . T . PASS END=45676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 45677 . A . PASS END=45677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 45678 . G . PASS END=45693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr2 45694 . G . PASS END=45709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 45710 . G . PASS END=45710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 45711 . G . PASS END=45716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:11,0 chr2 45717 . G . PASS END=45717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 45718 . C . PASS END=45724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:13,0 chr2 45725 . A . PASS END=45733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 45734 . A . PASS END=45735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 45736 . G . PASS END=45744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 45745 . T . PASS END=45745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 45746 . C . PASS END=45750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 45751 . A . PASS END=45751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 45752 . A . PASS END=45773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 45774 . G . PASS END=45780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 45781 . G . PASS END=45781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 45782 . A . PASS END=45782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 45783 . C . PASS END=45793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 45794 . G . PASS END=45799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 45800 . C . PASS END=45802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 45803 . G . PASS END=45807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 45808 . C . PASS END=45817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr2 45818 . G . PASS END=45818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 45819 . C . PASS END=45825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 45826 . G . PASS END=45843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,483:0,45,255:15,0 chr2 45844 . G . PASS END=45844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 45845 . G . PASS END=45847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:19,0 chr2 45848 . C . PASS END=45848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 45849 . A . PASS END=45849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 45850 . C . PASS END=45850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45851 . T . PASS END=45851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 45852 . G . PASS END=45855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 45856 . G . PASS END=45856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr2 45857 . G . PASS END=45857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 45858 . C . PASS END=45859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 45860 . C . PASS END=45874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 45875 . C . PASS END=45879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 45880 . G . PASS END=45887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,686:0,47,255:19,0 chr2 45888 . C . PASS END=45894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 45895 . A G, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,889,69,889:255,69,0:0,0:1.1622e+02,6.6223e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,13:0,0,12,11 chr2 45896 . T . PASS END=45907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,785:0,69,255:23,0 chr2 45908 . C . PASS END=45908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 45909 . C . PASS END=45912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 45913 . G . PASS END=45913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:19,0 chr2 45914 . G . PASS END=45917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45918 . A . PASS END=45918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 45919 . G . PASS END=45920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45921 . A . PASS END=45923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,790:0,50,255:20,0 chr2 45924 . G . PASS END=45932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 45933 . C . PASS END=45942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr2 45943 . T . PASS END=45943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,681:0,16,255:18,0 chr2 45944 . T . PASS END=45981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,657:0,41,255:19,0 chr2 45982 . G . PASS END=45984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45985 . T . PASS END=45987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:17,0 chr2 45988 . T . PASS END=45997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:17:0,36,540:0,46,255:12,0 chr2 45998 . G . PASS END=45998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 45999 . C . PASS END=45999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 46000 . C . PASS END=46010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 46011 . C . PASS END=46011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 46012 . T . PASS END=46012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 46013 . T . PASS END=46013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,415:0,9,255:13,0 chr2 46014 . C . PASS END=46014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 46015 . T . PASS END=46015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 46016 . T . PASS END=46023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,540:0,34,255:14,0 chr2 46024 . C . PASS END=46024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 46025 . T . PASS END=46040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,443:0,39,255:13,0 chr2 46041 . G . PASS END=46041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 46042 . G . PASS END=46051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 46052 . C . PASS END=46052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 46053 . T . PASS END=46059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 46060 . A . PASS END=46061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:12,0 chr2 46062 . T . PASS END=46081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,443:0,39,255:13,0 chr2 46082 . T . PASS END=46085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 46086 . C . PASS END=46086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 46087 . A . PASS END=46087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 46088 . G . PASS END=46093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 46094 . C . PASS END=46094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 46095 . C . PASS END=46106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 46107 . C . LowGQ END=46107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr2 46108 . T . PASS END=46117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,405:0,36,255:12,0 chr2 46118 . T . PASS END=46124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 46125 . G . LowGQ END=46125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,278:0,0,255:7,0 chr2 46126 . C . PASS END=46127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:8,0 chr2 46128 . C . PASS END=46146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:8,0 chr2 46147 . C . PASS END=46161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,210:6,0 chr2 46162 . G . LowGQ END=46169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:0:4:0,0,135:0,0,133:3,0 chr2 46170 . C . PASS END=46181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 46182 . G . LowGQ END=46182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,55:27,0,82:3,0 chr2 46183 . A . PASS END=46214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr2 46215 . G . PASS END=46215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 46216 . C . PASS END=46221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 46222 . C . PASS END=46224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr2 46225 . G . PASS END=46232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 46233 . C . PASS END=46249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr2 46250 . T . PASS END=46250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 46251 . G . PASS END=46257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 46258 . T . PASS END=46271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 46272 . C . PASS END=46322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 46323 . C . PASS END=46323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 46324 . G . PASS END=46358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr2 46359 . C . PASS END=46363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 46364 . T . PASS END=46374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:8:0,15,225:0,24,255:6,0 chr2 46375 . A . PASS END=46375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:4,0 chr2 46376 . G . PASS END=46384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 46385 . T . PASS END=46385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:5,0 chr2 218811 . T . PASS END=219001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:83:33:0,83,1178:0,83,255:40,2 chr2 224864 . C . PASS END=224881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,186,255:40,0 chr2 224882 . T . PASS END=224918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,197,255:40,0 chr2 224919 . A G, 47.89 PASS DP=71;MQ=250.00;MQRankSum=7.153;ReadPosRankSum=5.419;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,30,0:0.423,0.000:71:24,14,0:17,16,0:47:83,0,50,1028,1437,2465:255,0,255:36,0:4.7886e+01,9.2414e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,28,12,18:22,19,14,16 chr2 224920 . C . PASS END=224920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 229930 . T . PASS END=230044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:37:0,84,1303:0,84,255:40,0 chr2 230969 . C . PASS END=231159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,99,1575:0,99,255:40,0 chr2 231160 . T . PASS END=231160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:68:46:0,68,1487:0,68,255:39,0 chr2 231161 . G . PASS END=231191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:41:0,83,1177:0,83,255:40,0 chr2 233101 . T . PASS END=233101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 233102 . T . PASS END=233103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 233104 . C . PASS END=233104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 233105 . T . PASS END=233131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:18,0 chr2 233132 . A . PASS END=233132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 233133 . G . PASS END=233137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,631:0,54,255:19,0 chr2 233138 . C . PASS END=233144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr2 233145 . A . PASS END=233214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1025:0,84,255:38,0 chr2 233215 . T . PASS END=233215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:33,0 chr2 233216 . T . PASS END=233229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1225:0,86,255:33,0 chr2 234160 . C . PASS END=234266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:45:0,84,1260:0,122,255:40,0 chr2 234267 . T . PASS END=234272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:72:40:0,72,1080:0,92,255:25,0 chr2 242798 . C . PASS END=242800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 243509 . T . PASS END=243524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,254,255:40,0 chr2 243525 . G . PASS END=243562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:87:63:0,87,1305:0,160,255:40,0 chr2 247538 . C . PASS END=247602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:46:0,120,1800:0,138,255:40,0 chr2 249731 . T . PASS END=249751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,869:0,66,255:26,0 chr2 249752 . C . PASS END=249755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 249756 . A . PASS END=249766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 249767 . C . PASS END=249770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 249771 . T . PASS END=249814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:26,0 chr2 249815 . C . PASS END=249815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:21,0 chr2 249816 . A . PASS END=249817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 249818 . G . PASS END=249832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:14:0,42,504:0,42,255:14,0 chr2 249833 . C . PASS END=249834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr2 249835 . A . PASS END=249844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 253005 . C . PASS END=253115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:41:0,105,1575:0,123,255:40,1 chr2 262631 . T . PASS END=262631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1480:0,104,255:37,0 chr2 263984 . T . PASS END=263984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 264965 . A . PASS END=264977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1189:0,102,255:35,0 chr2 264978 . C . PASS END=265007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,98,255:37,0 chr2 269301 . G . PASS END=269347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,103,1690:0,103,255:40,0 chr2 271866 . G . PASS END=271869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:99:53:0,112,1732:0,112,255:40,0 chr2 271870 . C . PASS END=271870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,8:55:32:55:0,32,1405:0,32,255:40,0 chr2 271871 . A . PASS END=271871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 271872 . T . PASS END=271872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,7:56:37:56:0,37,1378:0,37,255:40,0 chr2 271873 . T . PASS END=271874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,138,255:40,0 chr2 271875 . G . PASS END=271875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,8:57:37:57:0,37,1418:0,37,255:40,0 chr2 271876 . T . PASS END=271880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:57:0,90,1592:0,90,255:40,0 chr2 271881 . C . PASS END=271881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:74:58:0,74,1685:0,74,255:40,0 chr2 271882 . A . PASS END=271886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:59:0,120,1800:0,133,255:40,0 chr2 271887 . T . LowGQ END=271887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,11:61:0:61:0,0,1378:37,0,255:40,0 chr2 271888 . T . PASS END=271897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:83:61:0,83,1635:0,83,255:40,0 chr2 271898 . G . LowGQ END=271898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,10:62:0:62:0,0,1483:3,0,255:40,0 chr2 271899 . T . PASS END=271902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,162,255:40,0 chr2 271903 . C . PASS END=271903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,10:65:29:65:0,29,1698:0,29,255:40,0 chr2 271904 . A . PASS END=271910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,5:65:99:65:0,111,1800:0,111,255:40,0 chr2 271911 . T . PASS END=271911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,8:66:65:66:0,65,1892:0,65,255:40,0 chr2 271912 . T . PASS END=271918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:62:0,120,1800:0,122,255:40,0 chr2 271919 . G . PASS END=271919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,8:62:31:62:0,31,1759:0,31,255:40,0 chr2 271920 . A . PASS END=271931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:86:61:0,86,1800:0,86,255:40,0 chr2 271932 . C . PASS END=271932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:61:61:0,61,1755:0,61,255:38,0 chr2 271933 . A . PASS END=271933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:99:60:0,108,1920:0,108,255:40,0 chr2 271934 . G . PASS END=271934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,7:58:14:58:0,14,1668:0,14,255:36,0 chr2 271935 . A . PASS END=271939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:96:58:0,96,1800:0,96,255:40,0 chr2 272037 . T . PASS END=272046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,104,1575:0,104,255:40,0 chr2 272047 . A . PASS END=272165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,103,1608:0,103,255:40,0 chr2 272166 . T . PASS END=272202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,114,1755:0,114,255:40,0 chr2 272203 . C T, 49.54 PASS DP=56;MQ=250.00;MQRankSum=6.399;ReadPosRankSum=2.390;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,26,0:0.464,0.000:56:7,13,0:23,13,0:48:84,0,50,863,1007,1870:255,0,255:29,0:4.9542e+01,6.9893e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,15,9,17:12,18,12,14 chr2 272204 . A . PASS END=272240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:54:0,120,1800:0,135,255:40,0 chr2 272241 . C . PASS END=272332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,106,1745:0,106,255:40,0 chr2 275140 . A . PASS END=275201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:87:0,120,1800:0,235,255:40,0 chr2 276980 . A . PASS END=277002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:72:0,120,1800:0,210,255:40,0 chr2 277003 . A G, 49.58 PASS DP=84;MQ=222.46;MQRankSum=1.910;ReadPosRankSum=6.045;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,39,0:0.464,0.000:84:19,18,0:26,21,0:48:84,0,50,1395,1581,2976:255,0,255:40,0:4.9578e+01,6.9634e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,23,22,17:22,23,23,16 chr2 277004 . A . PASS END=277040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:86:0,120,1800:0,227,255:40,0 chr2 277041 . A . PASS END=277085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:83:0,120,1800:0,231,255:40,0 chr2 277227 . G . PASS END=277276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,104,1488:0,104,255:40,0 chr2 277277 . C . PASS END=277302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:36,0 chr2 277303 . G . PASS END=277304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 280147 . T . PASS END=280152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,218,255:40,0 chr2 283111 . C . PASS END=283112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 283113 . T . PASS END=283113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 283114 . A . PASS END=283126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:36,0 chr2 283127 . A . PASS END=283127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 283128 . C . PASS END=283158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1141:0,80,255:37,0 chr2 283159 . G . PASS END=283159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:31,0 chr2 283160 . G . PASS END=283175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:32,0 chr2 286123 . A . PASS END=286124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr2 286125 . G . PASS END=286125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 286126 . C . PASS END=286133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,832:0,72,255:26,0 chr2 286134 . G . PASS END=286203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:34:0,85,1113:0,85,255:40,0 chr2 286290 . C . PASS END=286343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,112,1689:0,112,255:40,0 chr2 287583 . C . PASS END=287620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr2 287621 . T . PASS END=287621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 287622 . C . PASS END=287628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 287629 . G . PASS END=287644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 287645 . C . PASS END=287645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 287646 . G . PASS END=287646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 287647 . C . PASS END=287674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:14:0,40,512:0,40,255:19,0 chr2 287675 . G . PASS END=287675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr2 287676 . C . PASS END=287677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 287678 . G . PASS END=287678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 287679 . A . PASS END=287681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 287682 . G . PASS END=287682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 287683 . G . PASS END=287686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 287687 . T . PASS END=287687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 287688 . T . PASS END=287692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 287693 . A . PASS END=287694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 287695 . C . PASS END=287701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 287702 . A . PASS END=287704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 287705 . A . PASS END=287709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 287710 . C . PASS END=287710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 287711 . A . PASS END=287714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 287715 . C . PASS END=287717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 287718 . G . PASS END=287718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 287719 . C . PASS END=287721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 287722 . C . PASS END=287760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,713:0,47,255:19,0 chr2 287761 . GC G, 0.01 DRAGENIndelHardQUAL DP=21;MQ=250.00;MQRankSum=2.205;ReadPosRankSum=0.945;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:18,2,0:0.100,0.000:20:7,0,0:11,2,0:27:0,2,52,54,516,568:6,0,255:17,4:9.1035e-03,2.6790e+01,7.9790e+01,8.8910e+01,4.5000e+02,4.5000e+02:0.00,25.00,28.00,34.77,59.77,37.77:10,8,0,2:9,9,2,0 chr2 287762 . C . LowGQ END=287763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:20:0,0,568:18,0,255:18,4 chr2 287764 . C . PASS END=287768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr2 287769 . G . PASS END=287778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,44,255:13,1 chr2 287779 . C . PASS END=287782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 287783 . G . PASS END=287784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:17:0,37,585:0,37,255:15,0 chr2 287785 . C . PASS END=287799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 287800 . C . PASS END=287806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,31,255:12,0 chr2 287807 . A . PASS END=287811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:13:0,24,360:0,39,255:9,0 chr2 287812 . G . PASS END=287812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr2 287813 . A . PASS END=287835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:3:0,6,90:0,9,116:3,0 chr2 293573 . A . PASS END=293650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,116,1598:0,116,255:40,0 chr2 293651 . T . PASS END=293687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,170,255:40,0 chr2 293688 . T C, 50.00 PASS DP=68;MQ=112.16;MQRankSum=2.184;ReadPosRankSum=5.165;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,35,0:0.530,0.000:66:19,17,0:12,18,0:48:85,0,50,1139,1006,2145:255,0,255:30,0:5.0000e+01,6.6786e-05,5.2676e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,12,24,11:17,14,14,21 chr2 293689 . A . PASS END=293718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:92:62:0,92,1800:0,92,255:40,0 chr2 293719 . A G, 57.25 PASS DP=60;MQ=68.01;MQRankSum=1.191;ReadPosRankSum=0.053;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:9,50,0:0.847,0.000:59:4,28,0:5,22,0:7:94,9,0,1693,302,1986:255,0,105:10,0:5.7255e+01,7.3050e+00,8.9374e-01,4.5000e+02,3.3508e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,1,28,22:5,4,24,26 chr2 293720 . A . PASS END=293725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:64:0,101,1800:0,101,255:40,0 chr2 293726 . C A,G, 794.86 PASS DP=62;MQ=58.89;MQRankSum=-0.088;ReadPosRankSum=1.263;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:1,34,24,0:0.576,0.407,0.000:59:1,18,11,0:0,16,13,0:46:864,781,79,1044,0,83,1855,795,1049,1867:255,103,0:4,0:4.5000e+02,4.5000e+02,4.7325e+01,4.5000e+02,1.1338e-04,5.1200e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,1,37,21:0,1,24,34 chr2 293727 . C . PASS END=293735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,167,255:40,0 chr2 293736 . T C, 35.74 PASS DP=72;MQ=51.52;MQRankSum=-1.226;ReadPosRankSum=1.392;FractionInformativeReads=0.806;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,19,0:0.328,0.000:58:18,12,0:21,7,0:36:71,0,48,607,1306,1914:255,0,255:40,0:3.5738e+01,1.1917e-03,5.1201e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,16,9,10:18,21,10,9 chr2 293737 . A . PASS END=293773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:74:0,120,1800:0,164,255:40,0 chr2 293774 . G A, 40.00 PASS DP=75;MQ=39.88;MQRankSum=2.256;ReadPosRankSum=-3.464;FractionInformativeReads=0.747;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,34,0:0.607,0.000:56:12,14,0:10,20,0:35:75,0,34,1044,671,1714:255,0,255:40,0:4.0001e+01,1.3093e-03,3.6958e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,14,20:10,12,20,14 chr2 293775 . C . PASS END=293783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:78:0,120,1800:0,193,255:40,0 chr2 293784 . T C, 42.88 PASS DP=76;MQ=40.56;MQRankSum=2.253;ReadPosRankSum=-2.009;FractionInformativeReads=0.750;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,34,0:0.596,0.000:57:13,20,0:10,14,0:36:78,0,34,994,672,1672:255,0,255:40,0:4.2876e+01,1.0736e-03,3.7086e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,20,14:10,13,18,16 chr2 293785 . A . PASS END=293821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:81:0,120,1800:0,161,255:40,0 chr2 293822 . A G, 14.31 PASS DP=80;MQ=46.86;MQRankSum=-2.699;ReadPosRankSum=2.655;FractionInformativeReads=0.700;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,9,0:0.161,0.000:56:26,4,0:21,5,0:14:49,0,43,217,286,503:150,0,255:40,0:1.4312e+01,1.6408e-01,4.6414e+01,2.1718e+02,3.2070e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,27,5,4:25,22,4,5 chr2 293823 . C . PASS END=293831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,197,255:40,0 chr2 293832 . C T, 10.89 PASS DP=79;MQ=48.05;MQRankSum=-3.482;ReadPosRankSum=4.688;FractionInformativeReads=0.684;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,9,0:0.167,0.000:54:24,4,0:21,5,0:11:45,0,43,176,331,508:159,0,255:40,0:1.0885e+01,3.6959e-01,4.6620e+01,1.7654e+02,3.6617e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,24,3,6:28,17,2,7 chr2 293833 . A . PASS END=293869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:73:0,114,1800:0,114,255:40,0 chr2 293870 . G . PASS END=293879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,136,255:40,0 chr2 293880 . T . PASS END=293880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,6:72:72:72:0,72,2128:0,72,255:40,0 chr2 293881 . A . PASS END=293887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,142,255:40,0 chr2 293888 . G . PASS END=293888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:42:63:0,42,2080:0,42,255:40,0 chr2 293889 . C . PASS END=293908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,111,1665:0,120,255:40,0 chr2 293909 . G . LowGQ END=293910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,18:58:0:53:0,0,572:255,0,255:30,0 chr2 293911 . G . PASS END=293911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,117,1755:0,153,255:39,0 chr2 293912 . A . PASS END=293912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:8:47:0,8,1418:0,8,255:36,0 chr2 293913 . G . PASS END=293913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:30:47:0,30,1415:0,30,255:37,0 chr2 293914 . G . PASS END=293914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,117,1755:0,141,255:39,0 chr2 293915 . C . PASS END=293915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:38:44:0,38,1435:0,38,255:39,0 chr2 293916 . C . PASS END=293916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1383:0,74,255:39,0 chr2 293917 . C . PASS END=293917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1466:0,87,255:38,0 chr2 293918 . G . PASS END=293918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:12:41:0,12,1173:0,12,255:36,0 chr2 293919 . C . PASS END=293927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,102,1530:0,104,255:38,0 chr2 293928 . T . PASS END=293928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1209:0,54,255:32,0 chr2 293929 . A . PASS END=293949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1242:0,87,255:36,0 chr2 293950 . T . PASS END=293950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:29,0 chr2 293951 . C . PASS END=293952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,89,255:29,0 chr2 293953 . T . PASS END=293954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:27,0 chr2 293955 . A . PASS END=293955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 293956 . C . PASS END=293957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 293958 . C . PASS END=293958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:27,0 chr2 293959 . G . PASS END=293965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:29,0 chr2 293966 . A . PASS END=293966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,984:0,43,255:26,0 chr2 293967 . C . PASS END=293986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1196:0,85,255:33,0 chr2 293987 . T . PASS END=293995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:31,0 chr2 293996 . A . PASS END=293998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 293999 . C . PASS END=293999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr2 294000 . C . PASS END=294001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr2 294002 . C . PASS END=294002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:23,0 chr2 294003 . A . PASS END=294004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:24,0 chr2 294005 . G . PASS END=294005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1016:0,16,255:22,0 chr2 294006 . T . PASS END=294008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,947:0,42,255:22,0 chr2 294009 . G . PASS END=294009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:21,0 chr2 294010 . G . PASS END=294010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:21,0 chr2 294011 . C . PASS END=294013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,945:0,62,255:22,0 chr2 294014 . G . PASS END=294014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 294015 . C . PASS END=294016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 294017 . T . PASS END=294023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:18,0 chr2 294024 . T C, 29.18 PASS DP=21;MQ=18.73;MQRankSum=-1.691;ReadPosRankSum=3.423;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,6,0:0.300,0.000:20:6,3,0:8,3,0:28:64,0,31,207,123,329:159,0,255:12,0:2.9180e+01,7.0770e-03,3.3764e+01,2.0651e+02,1.5751e+02,3.3224e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,13,1,5:9,5,2,4 chr2 294025 . A . PASS END=294040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,652:0,41,255:18,0 chr2 294041 . C . PASS END=294041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:13,0 chr2 294042 . T . PASS END=294042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 294043 . G . PASS END=294054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:13:0,32,540:0,32,255:12,0 chr2 294055 . A G, 26.04 PASS DP=11;MQ=16.24;MQRankSum=-0.715;ReadPosRankSum=2.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,8,0:0.727,0.000:11:0,4,0:3,4,0:20:61,0,19,278,75,353:255,0,75:4,0:2.6041e+01,4.0798e-02,2.1636e+01,2.7787e+02,1.1030e+02,3.5636e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,3,3,5:3,0,3,5 chr2 294056 . A . PASS END=294061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr2 294062 . G A, 26.01 PASS DP=11;MQ=16.24;MQRankSum=-0.825;ReadPosRankSum=2.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,6,0:0.545,0.000:11:1,3,0:4,3,0:25:61,0,29,186,176,361:174,0,174:6,0:2.6014e+01,1.3707e-02,3.1890e+01,1.8580e+02,2.1038e+02,3.6439e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,1,5:4,1,2,4 chr2 294063 . C . PASS END=294071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 294072 . T C, 0.01 DRAGENSnpHardQUAL DP=11;MQ=16.24;MQRankSum=0.791;ReadPosRankSum=-0.791;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:3,1,0:7,0,0:29:6,0,29,36,318,353:3,0,255:10,0:5.9477e-03,2.8641e+01,6.0641e+01,6.4409e+01,3.8108e+02,3.8507e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,1,0:5,5,1,0 chr2 294073 . A . PASS END=294080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr2 294081 . C . PASS END=294086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 294087 . C . PASS END=294087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr2 294088 . A . PASS END=294105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr2 294106 . G . LowGQ END=294106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:6,0 chr2 294107 . C . PASS END=294107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 294108 . C . PASS END=294109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 294110 . A G, 3.33 DRAGENSnpHardQUAL DP=9;MQ=13.59;MQRankSum=-0.762;ReadPosRankSum=1.666;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,2,0:0.222,0.000:9:4,0,0:3,2,0:3:35,0,26,71,250,322:50,0,244:4,0:3.3299e+00,2.7181e+00,3.1718e+01,7.4091e+01,2.8784e+02,3.2744e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,1,1:3,4,1,1 chr2 294111 . C . PASS END=294112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:6,0 chr2 294113 . T . PASS END=294119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:6:8:0,6,90:0,7,255:3,0 chr2 294120 . C T, 0.39 DRAGENSnpHardQUAL DP=8;MQ=11.34;MQRankSum=0.000;ReadPosRankSum=1.589;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,2,0:0.250,0.000:8:3,0,0:3,2,0:11:24,0,23,43,212,255:31,0,209:1,0:3.8998e-01,1.0672e+01,3.6662e+01,5.3218e+01,2.5779e+02,2.6857e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,6,1,1:3,3,1,1 chr2 294121 . A . PASS END=294127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 294128 . A G, 14.17 PASS DP=3;MQ=5.83;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,0,0:0,3,0:6:51,9,0,116,9,116:69,0,8:1,0:1.4166e+01,7.1665e+00,1.1373e+00,1.1424e+02,4.1936e+01,1.1724e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,2:0,0,2,1 chr2 294129 . C . LowGQ END=294149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:3:0,0,0:0,0,43:3,0 chr2 294150 . T C, 8.76 DRAGENSnpHardQUAL DP=3;MQ=4.80;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=0.667;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,1,0:0.500,0.000:2:0,0,0:1,1,0:3:43,4,0,143,143,143:69,0,30:1,0:8.7604e+00,4.1646e+00,3.1546e+00,1.4353e+02,1.7830e+02,1.4654e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,0,1:1,0,1,0 chr2 294151 . G . PASS END=294151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 294152 . G A, 11.16 PASS DP=3;MQ=4.80;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=0.667;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,1,0:0.500,0.000:2:0,0,0:1,1,0:3:46,4,0,146,146,146:69,0,30:1,0:1.1162e+01,3.8904e+00,2.8803e+00,1.4593e+02,1.8070e+02,1.4894e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,0,1:1,0,1,0 chr2 294153 . G . LowGQ END=294165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,39:0,0,69:3,0 chr2 294166 . C . PASS END=294167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:4,0 chr2 294168 . T . LowGQ END=294168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,3:4:0:4:0,0,0:104,0,27:1,0 chr2 294169 . A . PASS END=294169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 294170 . G . LowGQ END=294170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 294171 . A . PASS END=294171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 294172 . T . LowGQ END=294172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 294173 . G . PASS END=294177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 294178 . T . LowGQ END=294178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 294179 . T . PASS END=294188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr2 294189 . G . PASS END=294193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 294194 . C . PASS END=294196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:13,0 chr2 294197 . G . LowGQ END=294198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,9:13:0:13:0,0,0:255,0,108:4,0 chr2 294199 . G . PASS END=294210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 294211 . C . PASS END=294215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr2 294216 . T . PASS END=294216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 294217 . A . PASS END=294220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 294221 . G . PASS END=294221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 294222 . G . PASS END=294223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 294224 . G . PASS END=294224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 294225 . C . PASS END=294225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 294226 . T . PASS END=294226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 294227 . T . PASS END=294229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:22,0 chr2 294230 . T . PASS END=294230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 294231 . C . PASS END=294232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 294233 . C . PASS END=294233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 294234 . T . PASS END=294243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,815:0,66,255:26,0 chr2 294244 . C . PASS END=294249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr2 294250 . G . PASS END=294253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr2 294254 . A . PASS END=294254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,828:0,46,255:29,0 chr2 294255 . C . PASS END=294256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1174:0,96,255:32,0 chr2 294257 . T . PASS END=294257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr2 294258 . T . PASS END=294258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr2 294259 . C . PASS END=294263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:35,0 chr2 294264 . C . PASS END=294264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:11:35:0,11,989:0,11,255:32,0 chr2 294265 . A . PASS END=294267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1250:0,105,255:35,0 chr2 294268 . T . PASS END=294268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1135:0,72,255:33,0 chr2 294269 . G . PASS END=294269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1290:0,105,255:35,0 chr2 294270 . G . PASS END=294270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:33,0 chr2 294271 . C . PASS END=294292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1225:0,89,255:40,0 chr2 294293 . G A, 25.28 PASS DP=49;MQ=29.26;MQRankSum=-0.278;ReadPosRankSum=0.023;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,13,0:0.271,0.000:48:17,5,0:18,8,0:25:60,0,41,160,160,160:255,0,255:39,0:2.5283e+01,1.3074e-02,4.3638e+01,1.6005e+02,1.9482e+02,1.6306e+02:0.00,34.77,37.78,34.77,69.54,37.78:25,10,11,2:21,14,5,8 chr2 294294 . T C, 25.28 PASS DP=49;MQ=29.26;MQRankSum=-0.283;ReadPosRankSum=0.011;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,13,0:0.265,0.000:49:17,5,0:19,8,0:25:60,0,41,160,160,160:240,0,255:40,0:2.5283e+01,1.3074e-02,4.3638e+01,1.6005e+02,1.9482e+02,1.6306e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,10,11,2:21,15,5,8 chr2 294295 . G . PASS END=294295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:1:52:0,1,1623:0,1,255:40,0 chr2 294296 . G A, 25.28 PASS DP=48;MQ=29.56;MQRankSum=-0.606;ReadPosRankSum=-0.059;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,13,0:0.277,0.000:47:16,5,0:18,8,0:25:60,0,41,160,160,160:255,0,255:39,0:2.5283e+01,1.3074e-02,4.3638e+01,1.6005e+02,1.9482e+02,1.6306e+02:0.00,34.77,37.78,34.77,69.54,37.78:25,9,11,2:19,15,5,8 chr2 294297 . G . PASS END=294342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:51:0,103,1800:0,103,255:40,0 chr2 294343 . A G, 44.94 PASS DP=66;MQ=73.74;MQRankSum=0.230;ReadPosRankSum=4.530;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,26,0:0.413,0.000:63:13,12,0:24,14,0:44:80,0,50,755,1122,1910:255,0,255:38,0:4.4937e+01,1.6101e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,23,18,8:18,19,14,12 chr2 294344 . A . PASS END=294380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:72:0,120,1800:0,128,255:40,1 chr2 294381 . G . PASS END=294578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:27:0,80,994:0,80,255:40,1 chr2 294579 . C . PASS END=294607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,969:0,65,255:26,0 chr2 495070 . A . PASS END=495123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,116,1582:0,116,255:40,0 chr2 495124 . A . PASS END=495164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:66:0,120,1800:0,168,255:40,0 chr2 495165 . A G, 43.17 PASS DP=98;MQ=157.17;MQRankSum=-4.551;ReadPosRankSum=3.882;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:64,32,0:0.333,0.000:96:28,19,0:36,13,0:42:78,0,47,178,178,178:255,0,255:40,0:4.3168e+01,2.5291e-04,5.0000e+01,1.7794e+02,2.1271e+02,1.8095e+02:0.00,34.77,37.78,34.77,69.54,37.78:39,25,18,14:33,31,19,13:495165 chr2 495166 . T . PASS END=495170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:100:0,120,1800:0,223,255:40,0 chr2 495171 . T C, 43.17 PASS DP=99;MQ=154.46;MQRankSum=-4.565;ReadPosRankSum=2.745;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:64,33,0:0.340,0.000:97:29,20,0:35,13,0:42:78,0,47,178,178,178:255,0,255:40,0:4.3168e+01,2.5291e-04,5.0000e+01,1.7794e+02,2.1271e+02,1.8095e+02:0.00,34.77,37.78,34.77,69.54,37.78:38,26,18,15:33,31,19,14:495165 chr2 495172 . A . PASS END=495173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:100:0,120,1800:0,255,255:40,0 chr2 495174 . A G, 43.17 PASS DP=96;MQ=148.33;MQRankSum=-4.935;ReadPosRankSum=2.353;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:61,33,0:0.351,0.000:94:28,21,0:33,12,0:42:78,0,47,178,178,178:255,0,255:40,0:4.3168e+01,2.5291e-04,5.0000e+01,1.7794e+02,2.1271e+02,1.8095e+02:0.00,34.77,37.78,34.77,69.54,37.78:37,24,18,15:32,29,18,15:495165 chr2 495175 . G . PASS END=495248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,2:112:99:97:0,120,1800:0,223,255:40,0 chr2 495249 . G T, 33.11 PASS DP=101;MQ=87.62;MQRankSum=-4.108;ReadPosRankSum=1.824;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:65,34,0:0.343,0.000:99:32,24,0:33,10,0:33:68,0,50,1163,2271,3434:255,0,255:40,0:3.3109e+01,2.1447e-03,5.3002e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:42,23,13,21:39,26,17,17:495165 chr2 495250 . G . PASS END=495278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:88:0,120,1800:0,226,255:40,0 chr2 495279 . G T, 27.17 PASS DP=84;MQ=65.60;MQRankSum=-3.232;ReadPosRankSum=1.064;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:56,27,0:0.325,0.000:83:29,19,0:27,8,0:27:62,0,48,868,1942,2810:255,0,255:40,0:2.7171e+01,8.3773e-03,5.0558e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:32,24,12,15:31,25,16,11:495165 chr2 495280 . G . PASS END=495308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:58:0,111,1800:0,111,255:40,0 chr2 495309 . G T, 27.20 PASS DP=56;MQ=33.27;MQRankSum=0.149;ReadPosRankSum=1.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:38,18,0:0.321,0.000:56:19,13,0:19,5,0:27:62,0,46,575,1161,1737:255,0,255:27,0:2.7198e+01,8.3443e-03,4.8808e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,19,9,9:18,20,10,8:495165 chr2 495310 . G . PASS END=495317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:90:47:0,90,1350:0,92,255:39,0 chr2 495318 . C . PASS END=495327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:66:33:0,66,990:0,77,255:25,0 chr2 495328 . A . PASS END=495328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,870:0,43,255:20,0 chr2 495329 . C . PASS END=495329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,926:0,60,255:18,0 chr2 495330 . A . PASS END=495333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:51:26:0,51,765:0,64,255:19,0 chr2 495334 . A . PASS END=495334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,776:0,31,255:16,0 chr2 495335 . C . PASS END=495335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:25:0,48,720:0,75,255:16,0 chr2 495336 . T . PASS END=495336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,660:0,14,255:15,0 chr2 495337 . A . PASS END=495337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:15,0 chr2 495338 . T . PASS END=495338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:33:22:0,33,495:0,49,255:10,0 chr2 495339 . G . PASS END=495339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,653:0,11,255:9,0 chr2 495340 . G . PASS END=495341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:30:19:0,30,450:0,32,255:10,0 chr2 495342 . A . PASS END=495343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:21:18:0,21,360:0,21,255:8,0 chr2 495344 . C . PASS END=495346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:15:17:0,15,225:0,20,255:5,0 chr2 495347 . C . PASS END=495347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:15:17:0,15,225:0,51,255:5,0 chr2 495348 . C . LowGQ END=495367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:6,1:7:0:1:0,0,0:0,0,39:3,0 chr2 495368 . T . LowDepth;LowGQ END=495669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 495670 . G . LowDepth END=495674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr2 495675 . G . PASS END=495682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 495683 . C . PASS END=495685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 495686 . A . PASS END=495686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 495687 . C . PASS END=495691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 495692 . G . PASS END=495694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 495695 . C . PASS END=495697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr2 495698 . T . PASS END=495698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 495699 . G . PASS END=495704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr2 495705 . G . PASS END=495706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 495707 . C . PASS END=495707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 495708 . C . PASS END=495715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:26,0 chr2 495716 . A . PASS END=495717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1001:0,84,255:31,0 chr2 495718 . A . PASS END=495718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:30,0 chr2 495719 . C . PASS END=495720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1176:0,83,255:33,0 chr2 495721 . G . PASS END=495721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:31,0 chr2 495722 . G . PASS END=495781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:33:0,88,1197:0,88,255:40,0 chr2 495782 . G . PASS END=495818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:73:0,120,1800:0,183,255:40,0 chr2 495819 . T G, 45.32 PASS DP=84;MQ=152.79;MQRankSum=1.220;ReadPosRankSum=5.955;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,32,0:0.381,0.000:84:29,16,0:23,16,0:45:80,0,50,1063,1671,2734:255,0,255:40,0:4.5324e+01,1.4911e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,29,12,20:26,26,16,16 chr2 495820 . G . PASS END=495856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,164,255:40,0 chr2 495857 . A . PASS END=495879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:52:0,101,1800:0,101,255:40,0 chr2 496185 . T . PASS END=496214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,143,255:40,0 chr2 634905 . T . PASS END=634905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 669580 . T . PASS END=669671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,110,1458:0,110,255:40,0 chr2 669672 . T . PASS END=669672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1264:0,70,255:34,0 chr2 669673 . A . PASS END=669675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 669757 . C . PASS END=669793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:34:0,87,1263:0,89,255:37,0 chr2 669794 . A . PASS END=669794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:33,0 chr2 669795 . A . PASS END=669850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:35:0,83,1197:0,83,255:37,0 chr2 672808 . C . PASS END=672821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr2 672822 . A . PASS END=672822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 672823 . G . PASS END=672830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 672831 . A . PASS END=672831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 672832 . T . PASS END=672836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 672837 . G . PASS END=672843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:24,0 chr2 672844 . G . PASS END=672844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:23,0 chr2 672845 . C . PASS END=672862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,776:0,66,255:23,0 chr2 675510 . C . PASS END=675630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:34:0,99,1235:0,102,255:40,0 chr2 675758 . C . PASS END=675770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:25,0 chr2 675771 . A . PASS END=675771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:21,0 chr2 675772 . G . PASS END=675775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 676095 . T . PASS END=676103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,714:0,51,255:19,0 chr2 676104 . A . PASS END=676118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:25,0 chr2 676119 . G . PASS END=676119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 676120 . A . PASS END=676121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 676122 . T . PASS END=676122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,763:0,58,255:24,0 chr2 676123 . C . PASS END=676125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 676126 . G . PASS END=676126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 676127 . A . PASS END=676136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:26,0 chr2 676137 . A . PASS END=676139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr2 676140 . T . PASS END=676163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:31,0 chr2 676164 . T . PASS END=676164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr2 676165 . C . PASS END=676176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 676177 . C G, 137.28 PASS DP=30;MQ=249.64;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,16,0:0,14,0:87:175,90,0,1147,90,1154:255,74,0:0,0:1.3728e+02,8.7282e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,17:0,0,17,13 chr2 676178 . T . PASS END=676182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr2 676183 . T . PASS END=676205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,823:0,66,255:26,0 chr2 676206 . C . PASS END=676206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:21,0 chr2 676207 . C . PASS END=676207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 676208 . G . PASS END=676214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 676215 . G . PASS END=676227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr2 676228 . C . PASS END=676238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,37,255:12,0 chr2 676574 . C . PASS END=676579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1324:0,92,255:35,0 chr2 676580 . A . PASS END=676581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:36:0,42,1211:0,42,255:35,2 chr2 676582 . C . PASS END=676582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr2 676583 . A . PASS END=676633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1194:0,86,255:34,0 chr2 676634 . G . PASS END=676639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr2 677289 . C . PASS END=677345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1349:0,95,255:39,0 chr2 774542 . A . PASS END=774545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 774546 . T . PASS END=774546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:28,0 chr2 774547 . A . PASS END=774547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr2 774548 . T . PASS END=774549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 774550 . T . PASS END=774550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 774551 . G . PASS END=774552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:30,0 chr2 774553 . G . PASS END=774553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 774554 . G . PASS END=774554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 774555 . T . PASS END=774555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 774556 . G . PASS END=774599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1186:0,81,255:37,0 chr2 774600 . T . PASS END=774600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1112:0,77,255:35,0 chr2 774601 . C . PASS END=774611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1356:0,111,255:37,0 chr2 777106 . T . PASS END=777110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr2 777111 . T . PASS END=777165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:18,0 chr2 777166 . G . PASS END=777166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr2 777167 . G . PASS END=777199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,670:0,54,255:19,0 chr2 777200 . A . PASS END=777209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 777210 . G . PASS END=777210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 777211 . A . PASS END=777213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 777214 . G . PASS END=777234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,621:0,40,255:19,0 chr2 777235 . C . PASS END=777240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 777241 . C . PASS END=777241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 777242 . T . PASS END=777246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 777247 . G . PASS END=777247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 777248 . G . PASS END=777252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 777253 . C . PASS END=777260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 777261 . T . PASS END=777280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,701:0,63,255:21,0 chr2 777281 . T . PASS END=777281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 777282 . C . PASS END=777289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 777290 . C T, 44.83 PASS DP=21;MQ=250.00;MQRankSum=3.618;ReadPosRankSum=3.618;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,7,0:0.333,0.000:21:9,4,0:5,3,0:44:80,0,50,250,501,751:208,0,255:14,0:4.4834e+01,1.6438e-04,5.3000e+01,2.5038e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,4,3:7,7,5,2 chr2 777291 . G . PASS END=777298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 777299 . G . PASS END=777314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,720:0,44,255:19,0 chr2 777315 . A . PASS END=777327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr2 777328 . C . PASS END=777335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 777336 . C . PASS END=777338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 777339 . T . PASS END=777357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 777358 . A . PASS END=777368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 778184 . A . PASS END=778184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 778185 . G . PASS END=778185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 778186 . A . PASS END=778186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:19,0 chr2 778187 . C . PASS END=778192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,627:0,63,255:22,0 chr2 778193 . C . PASS END=778193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr2 778194 . A . PASS END=778202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 778203 . T . PASS END=778203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:18,0 chr2 778204 . G . PASS END=778229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 778230 . C . PASS END=778230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 778231 . T . PASS END=778231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 778232 . C . PASS END=778232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 778233 . C . PASS END=778235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr2 778236 . T . PASS END=778236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr2 778237 . G . PASS END=778242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,886:0,61,255:25,0 chr2 778243 . G . PASS END=778245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 778246 . C . PASS END=778247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 778248 . C . PASS END=778257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:28,0 chr2 778258 . A . PASS END=778258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 778259 . A . PASS END=778281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1155:0,80,255:32,0 chr2 778282 . C . PASS END=778282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:30,0 chr2 778283 . C . PASS END=778290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:34,0 chr2 778291 . A . PASS END=778291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:31,0 chr2 778292 . C . PASS END=778298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr2 778299 . G . PASS END=778299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:31,0 chr2 778300 . G . PASS END=778313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:32:0,88,1227:0,88,255:32,0 chr2 778314 . T . PASS END=778314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr2 778315 . C . PASS END=778382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1111:0,80,255:38,0 chr2 778383 . T . PASS END=778383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1111:0,64,255:29,0 chr2 778384 . C . PASS END=778387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,95,255:31,0 chr2 778388 . G . PASS END=778388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:26,0 chr2 778389 . T . PASS END=778395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1215:0,92,255:27,0 chr2 778396 . C . PASS END=778398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:26,0 chr2 778399 . T . PASS END=778405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1031:0,71,255:24,0 chr2 778660 . G . PASS END=778668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1086:0,99,255:34,0 chr2 778669 . G A, 42.36 PASS DP=35;MQ=250.00;MQRankSum=4.778;ReadPosRankSum=1.060;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,12,0:0.343,0.000:35:10,9,0:13,3,0:42:77,0,50,429,823,1252:255,0,255:22,0:4.2363e+01,2.7388e-04,5.3000e+01,4.2914e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,5,8,4:11,12,7,5 chr2 778670 . T . PASS END=778685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:39,0 chr2 778686 . A . PASS END=778686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:37,0 chr2 778687 . G . PASS END=778700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1426:0,101,255:39,0 chr2 778701 . A G, 169.48 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,25,0:0,16,0:119:207,122,0,1523,122,1523:255,123,0:0,0:1.6948e+02,1.1948e+02,0.0000e+00,4.5000e+02,1.5425e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,18:0,0,23,18 chr2 778702 . A . PASS END=778738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,107,1297:0,107,255:40,0 chr2 778739 . T . PASS END=778743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1482:0,107,255:39,0 chr2 778744 . G . PASS END=778744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1432:0,77,255:37,0 chr2 778745 . G . PASS END=778962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:35:0,90,1350:0,93,255:40,0 chr2 778963 . C . PASS END=778966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:31:0,75,1125:0,89,255:26,0 chr2 778967 . A . PASS END=778977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1255:0,86,255:30,0 chr2 778978 . A . PASS END=778978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr2 778979 . G . PASS END=778979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 778980 . A . PASS END=778982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 778983 . C . PASS END=778983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 778984 . T . PASS END=778985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 778986 . A . PASS END=778986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 946683 . A . PASS END=946683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 946684 . T . PASS END=946687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 946688 . C . PASS END=946696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 946697 . A . PASS END=946697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 946698 . C . PASS END=946730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:19,0 chr2 946731 . G . PASS END=946732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 946733 . C . PASS END=946754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:19,0 chr2 1014680 . A . PASS END=1014685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:34,0 chr2 1014686 . A . PASS END=1014686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr2 1014687 . G . PASS END=1014754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,101,1348:0,101,255:40,0 chr2 1079204 . A . PASS END=1079282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:34:0,96,1250:0,102,255:40,0 chr2 1079283 . T . PASS END=1079319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,130,255:40,0 chr2 1079320 . C T, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=3.440;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,29,0:0.580,0.000:50:13,14,0:8,15,0:47:85,0,48,1037,750,1787:255,0,255:20,0:5.0000e+01,7.9730e-05,5.0768e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,15,14:8,13,16,13 chr2 1079321 . G . PASS END=1079341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,108,1620:0,128,255:40,0 chr2 1093882 . C . PASS END=1093938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:88:41:0,88,1519:0,88,255:40,0 chr2 1094039 . G . PASS END=1094096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,156,255:40,0 chr2 1133308 . C . PASS END=1133351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,130,255:40,0 chr2 1133454 . G . PASS END=1133495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:92:0,120,1800:0,236,255:40,0 chr2 1161234 . G . PASS END=1161251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,676:0,54,255:19,0 chr2 1161252 . G . PASS END=1161275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:25,0 chr2 1161276 . G . PASS END=1161281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 1161282 . T . PASS END=1161282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 1161283 . A . PASS END=1161283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1161284 . T . PASS END=1161284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr2 1161285 . C . PASS END=1161287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:32,0 chr2 1161288 . A . PASS END=1161288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1032:0,66,255:29,0 chr2 1161289 . G . PASS END=1161311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1024:0,87,255:31,0 chr2 1161312 . C . PASS END=1161321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 1168778 . G . PASS END=1168780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:33:0,98,1271:0,98,255:38,0 chr2 1168781 . C A, 179.42 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,21,0:0,23,0:129:217,132,0,1690,132,1690:255,132,0:0,0:1.7942e+02,1.2942e+02,0.0000e+00,4.5000e+02,1.6419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,14:0,0,23,21 chr2 1168782 . C . PASS END=1168818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:44:0,120,1800:0,125,255:40,0 chr2 1168819 . T . PASS END=1168869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:47:0,114,1710:0,117,255:40,0 chr2 1204789 . G . PASS END=1204795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:23,0 chr2 1204796 . C T, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,9,0:0,14,0:66:154,69,0,884,69,884:255,69,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,11:0,0,12,11 chr2 1204797 . G . PASS END=1204808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,840:0,72,255:25,0 chr2 1204809 . G . PASS END=1204812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 1204813 . A . PASS END=1204813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 1204814 . T . PASS END=1204825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:32,0 chr2 1204826 . C . PASS END=1204826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr2 1204827 . G . PASS END=1204833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1257:0,92,255:36,0 chr2 1204834 . G . PASS END=1204912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,987:0,83,255:40,0 chr2 1204913 . T . PASS END=1204914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 1204915 . A . PASS END=1204915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:24,0 chr2 1204916 . G . PASS END=1204916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 1241660 . G . PASS END=1241660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 1241661 . T . PASS END=1241662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 1241663 . G . PASS END=1241664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 1241665 . A . PASS END=1241666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 1241667 . G . PASS END=1241667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 1241668 . C . PASS END=1241669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 1241670 . T . PASS END=1241670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,861:0,59,255:28,0 chr2 1241671 . T . PASS END=1241744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1186:0,84,255:35,0 chr2 1241745 . C . PASS END=1241745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr2 1241746 . T . PASS END=1241763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr2 1241764 . A . PASS END=1241764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:19,0 chr2 1241765 . C . PASS END=1241771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 1241772 . G . PASS END=1241789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:19,0 chr2 1243510 . A . PASS END=1243548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,169,255:40,0 chr2 1246510 . C . PASS END=1246572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:70:0,120,1800:0,185,255:40,0 chr2 1251099 . G . PASS END=1251130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:35:0,105,1274:0,105,255:40,0 chr2 1251131 . C . PASS END=1251215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:37:0,87,1305:0,110,255:40,0 chr2 1251713 . T . PASS END=1251742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,129,255:40,0 chr2 1252441 . A . PASS END=1252446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,111,1665:0,132,255:38,0 chr2 1260177 . C . PASS END=1260206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,182,255:40,0 chr2 1260207 . C T, 236.14 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,37,0:0,26,0:186:274,189,0,2389,189,2389:255,189,0:0,0:2.3614e+02,1.8614e+02,0.0000e+00,4.5000e+02,2.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,31:0,0,32,31 chr2 1260208 . G . PASS END=1260218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 1263142 . G . PASS END=1263213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,102,1530:0,110,255:40,0 chr2 1271137 . T . PASS END=1271145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,955:0,78,255:26,0 chr2 1271146 . A . PASS END=1271147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 1271148 . A . PASS END=1271183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1070:0,87,255:36,0 chr2 1271184 . T . PASS END=1271184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:33,0 chr2 1271185 . C . PASS END=1271192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:34,0 chr2 1271193 . T . PASS END=1271193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1288:0,80,255:34,0 chr2 1271194 . T . PASS END=1271194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:33,0 chr2 1271195 . T . PASS END=1271196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 1271197 . G . PASS END=1271197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr2 1271198 . A . PASS END=1271229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1163:0,80,255:35,0 chr2 1271230 . A G, 143.31 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,11,0:0,21,0:93:181,96,0,1231,96,1231:255,102,0:0,0:1.4331e+02,9.3308e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,15:0,0,18,14 chr2 1271231 . T . PASS END=1271233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr2 1271234 . T . PASS END=1271234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1209:0,64,255:28,0 chr2 1271235 . G . PASS END=1271239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1022:0,82,255:29,0 chr2 1271240 . G . PASS END=1271240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:28,0 chr2 1271241 . C . PASS END=1271243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1052:0,82,255:28,0 chr2 1271244 . T . PASS END=1271246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,958:0,62,255:26,0 chr2 1271247 . G . PASS END=1271249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr2 1271250 . G . PASS END=1271251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,934:0,60,255:29,0 chr2 1271252 . G . PASS END=1271254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,92,255:30,0 chr2 1271255 . A . PASS END=1271256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr2 1271257 . G . PASS END=1271257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:30,0 chr2 1271258 . T . PASS END=1271261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1173:0,83,255:33,0 chr2 1271262 . C . PASS END=1271262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1035:0,66,255:31,0 chr2 1271263 . A . PASS END=1271265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1081:0,82,255:33,0 chr2 1271266 . G . PASS END=1271266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1072:0,44,255:30,0 chr2 1271267 . T . PASS END=1271267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 1271268 . G . PASS END=1271274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1060:0,82,255:32,0 chr2 1271275 . G . PASS END=1271275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:16:33:0,16,949:0,16,255:27,0 chr2 1271276 . G . PASS END=1271277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:30,0 chr2 1271278 . A . PASS END=1271279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1092:0,63,255:29,0 chr2 1271280 . C . PASS END=1271282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:29,0 chr2 1271283 . G . PASS END=1271285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:30:0,63,1025:0,63,255:28,0 chr2 1271286 . G . PASS END=1271287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 1271288 . C . PASS END=1271288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 1271289 . C . PASS END=1271290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 1271291 . T . PASS END=1271291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr2 1271292 . G . PASS END=1271292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 1271293 . T . PASS END=1271325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,898:0,62,255:26,0 chr2 1271326 . G . PASS END=1271326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 1271327 . A . PASS END=1271343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr2 1271844 . C . PASS END=1271867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:93:0,120,1800:0,229,255:40,0 chr2 1282457 . A . PASS END=1282483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:97:0,120,1800:0,247,255:40,0 chr2 1312266 . T . PASS END=1312358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:33:0,99,1197:0,99,255:40,0 chr2 1317390 . G . PASS END=1317434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:45:0,89,1627:0,89,255:40,0 chr2 1317435 . G . PASS END=1317471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,3:65:99:62:0,120,1800:0,144,255:40,0 chr2 1317472 . C T, 50.00 PASS DP=67;MQ=249.94;MQRankSum=6.579;ReadPosRankSum=3.248;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,39,0:0.582,0.000:67:15,21,0:13,18,0:46:85,0,45,185,185,185:255,0,255:25,0:5.0000e+01,1.0639e-04,4.8395e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,10,21,18:15,13,19,20 chr2 1317473 . G . PASS END=1317509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,150,255:40,0 chr2 1317510 . T . PASS END=1317619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:87:39:0,87,1305:0,100,255:40,0 chr2 1317620 . A . PASS END=1317620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:29,0 chr2 1317621 . T . PASS END=1317622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:35:0,93,1395:0,105,255:32,0 chr2 1320037 . A . PASS END=1320105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:57:0,120,1800:0,153,255:40,0 chr2 1320106 . C . PASS END=1320142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:65:0,120,1800:0,175,255:40,0 chr2 1320143 . C T, 239.15 PASS DP=64;MQ=249.79;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,33,0:0,31,0:189:277,192,0,2420,192,2420:255,193,0:0,0:2.3915e+02,1.8915e+02,0.0000e+00,4.5000e+02,2.2392e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,46:0,0,31,33 chr2 1320144 . G . PASS END=1320147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 1371115 . G . PASS END=1371117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,666:0,44,255:19,0 chr2 1371118 . C . PASS END=1371119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 1371120 . C . PASS END=1371124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:18,0 chr2 1371125 . T . PASS END=1371125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,561:0,12,255:16,0 chr2 1371126 . C . PASS END=1371129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 1371130 . G . PASS END=1371136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 1371137 . G . PASS END=1371222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:27:0,80,956:0,80,255:38,0 chr2 1371223 . A . PASS END=1371246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 1417250 . C . PASS END=1417250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 1417268 . C . PASS END=1417268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr2 1417309 . G . PASS END=1417309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,120,1800:0,179,255:40,0 chr2 1417336 . T . PASS END=1417336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,129,255:40,0 chr2 1417461 . A . PASS END=1417495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,131,255:40,0 chr2 1418169 . G . PASS END=1418169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 1418180 . A . PASS END=1418187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr2 1418188 . C . PASS END=1418188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 1418189 . G . PASS END=1418189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr2 1418190 . C . PASS END=1418190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 1418191 . T . PASS END=1418191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:25,0 chr2 1418192 . C G, 49.34 PASS DP=28;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=3.391;FractionInformativeReads=0.964;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:9,7,0:6,5,0:48:84,0,50,378,472,864:246,0,255:17,0:4.9341e+01,7.2222e-05,5.3000e+01,3.7837e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,10,2:9,6,7,5 chr2 1418193 . G . PASS END=1418194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr2 1418195 . T . PASS END=1418211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:31,0 chr2 1418212 . T . PASS END=1418212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 1418213 . G . PASS END=1418229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:33,0 chr2 1418230 . A . PASS END=1418234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr2 1418235 . T . PASS END=1418235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1179:0,78,255:32,0 chr2 1418236 . T . PASS END=1418268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1107:0,83,255:34,0 chr2 1418269 . T . PASS END=1418269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1010:0,79,255:27,0 chr2 1418270 . T . PASS END=1418274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 1418287 . C . PASS END=1418287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 1426803 . A . PASS END=1426803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr2 1426813 . G . PASS END=1426813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1457:0,114,255:38,0 chr2 1426817 . G . PASS END=1426824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1474:0,117,255:39,0 chr2 1426825 . G . PASS END=1426891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:32:0,87,1305:0,96,255:40,0 chr2 1426892 . C . PASS END=1426901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:26,0 chr2 1437210 . A . PASS END=1437215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,954:0,67,255:25,0 chr2 1437216 . C . PASS END=1437216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1437217 . A . PASS END=1437218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 1437219 . G . PASS END=1437219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1437220 . A . PASS END=1437222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,879:0,67,255:26,0 chr2 1437223 . A . PASS END=1437224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 1437225 . A . PASS END=1437225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,846:0,54,255:26,0 chr2 1437226 . G . PASS END=1437234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:34,0 chr2 1437235 . T . PASS END=1437235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:32,0 chr2 1437236 . C . PASS END=1437379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1341:0,95,255:40,0 chr2 1440024 . A . PASS END=1440156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:31:0,82,1117:0,82,255:40,0 chr2 1442588 . A . PASS END=1442606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:80:0,120,1800:0,190,255:40,0 chr2 1442607 . G . PASS END=1442630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:94:0,120,1800:0,238,255:40,0 chr2 1457466 . A . PASS END=1457467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,899:0,75,255:25,0 chr2 1457468 . A . PASS END=1457468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:23,0 chr2 1457469 . C . PASS END=1457471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,919:0,75,255:26,0 chr2 1457472 . C . PASS END=1457475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:29,0 chr2 1457476 . A . PASS END=1457476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 1457477 . G . PASS END=1457543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,83,255:37,0 chr2 1457544 . G . PASS END=1457547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1100:0,74,255:26,0 chr2 1457548 . C . PASS END=1457557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 1457558 . A . PASS END=1457558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 1457559 . C . PASS END=1457562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 1457563 . G . PASS END=1457594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 1457595 . G . PASS END=1457595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 1457610 . C . PASS END=1457610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 1459848 . G . PASS END=1459966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,120,1800:0,125,255:40,0 chr2 1459967 . A . PASS END=1460003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,104,1575:0,104,255:40,0 chr2 1460004 . G T, 50.00 PASS DP=44;MQ=248.45;MQRankSum=5.663;ReadPosRankSum=1.010;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,23,0:0.523,0.000:44:13,9,0:8,14,0:48:85,0,50,805,751,1556:255,0,255:19,0:5.0000e+01,6.6010e-05,5.2820e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,13,10:14,7,11,12 chr2 1460005 . C . PASS END=1460025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,89,255:35,0 chr2 1460026 . A . PASS END=1460034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:26,0 chr2 1460035 . A . PASS END=1460040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr2 1460041 . G . PASS END=1460041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:19,0 chr2 1460042 . T . PASS END=1460047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,854:0,61,255:21,0 chr2 1460048 . C . PASS END=1460049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr2 1460050 . T . PASS END=1460050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:16,0 chr2 1460051 . A . PASS END=1460054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr2 1480843 . C . PASS END=1480843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 1480858 . C . PASS END=1480871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:30,0 chr2 1480872 . C . PASS END=1480872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:30,0 chr2 1480873 . C . PASS END=1480984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:35:0,87,1305:0,91,255:40,0 chr2 1480985 . A . PASS END=1480985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:34,0 chr2 1480986 . G . PASS END=1481019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1238:0,86,255:35,0 chr2 1481020 . A . PASS END=1481036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:25:0,66,990:0,75,255:25,0 chr2 1481037 . C . PASS END=1481037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 1481038 . C . PASS END=1481042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 1481043 . C . PASS END=1481043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:21,0 chr2 1481044 . C . PASS END=1481049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:21,0 chr2 1481050 . A . PASS END=1481050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:18,0 chr2 1481051 . G . PASS END=1481057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 1481058 . G . PASS END=1481061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 1481062 . A . PASS END=1481074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 1481075 . C . PASS END=1481075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 1481076 . C . PASS END=1481118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr2 1481119 . C . PASS END=1481134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:31,0 chr2 1481135 . T . PASS END=1481135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 1481136 . C . PASS END=1481139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 1481140 . C . PASS END=1481140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 1481141 . C . PASS END=1481149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1155:0,90,255:30,0 chr2 1481150 . C . PASS END=1481150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 1481151 . G . PASS END=1481160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 1481161 . T . PASS END=1481161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr2 1481162 . G . PASS END=1481163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 1481164 . G . PASS END=1481164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr2 1481165 . C . PASS END=1481177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 1481178 . C . PASS END=1481178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 1481179 . A . PASS END=1481179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,950:0,48,255:22,0 chr2 1481180 . T . PASS END=1481190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:22,0 chr2 1481191 . A . PASS END=1481191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,607:0,33,255:18,0 chr2 1481192 . C . PASS END=1481192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 1481193 . C . PASS END=1481193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:19,0 chr2 1481194 . C . PASS END=1481198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 1481199 . G . PASS END=1481199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 1481200 . C . PASS END=1481206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 1481207 . T . PASS END=1481230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr2 1481231 . G C, 97.71 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,4,0:0,13,0:48:135,51,0,630,51,630:255,51,0:0,0:9.7705e+01,4.7705e+01,7.3776e-05,4.5000e+02,8.2475e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,12:0,0,10,7 chr2 1481232 . C . PASS END=1481257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 1481258 . A . PASS END=1481268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr2 1481269 . C . PASS END=1481334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,382:0,30,255:13,0 chr2 1481335 . G . PASS END=1481368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr2 1481369 . T . PASS END=1481369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 1481370 . G . PASS END=1481374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 1481375 . A . PASS END=1481376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 1481381 . G . PASS END=1481381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 1488368 . A . PASS END=1488377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr2 1488378 . T . PASS END=1488378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:23,0 chr2 1488379 . G . PASS END=1488379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 1488380 . A . PASS END=1488380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 1488381 . G . PASS END=1488386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:26,0 chr2 1488387 . A . PASS END=1488388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 1488389 . A . PASS END=1488389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 1488390 . T . PASS END=1488395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 1488396 . G . PASS END=1488396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 1488397 . G . PASS END=1488403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr2 1488404 . G . PASS END=1488404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 1488405 . G . PASS END=1488420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:31,0 chr2 1488421 . G . PASS END=1488421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr2 1488422 . C . PASS END=1488432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,99,1465:0,102,255:39,0 chr2 1488433 . T . PASS END=1488433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr2 1488434 . C . PASS END=1488512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:38:0,81,1321:0,81,255:40,0 chr2 1488513 . C . PASS END=1488513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:33,0 chr2 1488514 . C . PASS END=1488558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1216:0,83,255:35,0 chr2 1488559 . G . PASS END=1488590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:25,0 chr2 1488591 . A . PASS END=1488626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 1491593 . G . PASS END=1491755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1215:0,85,255:40,0 chr2 1491756 . G . PASS END=1491763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr2 1497574 . G . PASS END=1497592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1003:0,81,255:31,0 chr2 1497593 . G . PASS END=1497593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr2 1497594 . T . PASS END=1497765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:32:0,82,1241:0,82,255:40,0 chr2 1497766 . C . PASS END=1497780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1241:0,86,255:32,0 chr2 1497781 . A . PASS END=1497802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:24:0,69,1035:0,72,255:25,0 chr2 1497803 . C T, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,11,0:0,16,0:78:166,81,0,1039,81,1039:255,81,0:0,0:1.2826e+02,7.8259e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,18:0,0,13,14 chr2 1497804 . G . PASS END=1497811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr2 1499749 . C . PASS END=1499749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 1499756 . T . PASS END=1499756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 1499761 . G . PASS END=1499763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 1499764 . T . PASS END=1499764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr2 1499765 . T . PASS END=1499773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr2 1499774 . A . PASS END=1499774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:20,0 chr2 1499775 . A . PASS END=1499780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr2 1499781 . A . PASS END=1499781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:20,0 chr2 1499782 . C . PASS END=1499791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:26,0 chr2 1499792 . G . PASS END=1499792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 1499793 . A . PASS END=1499794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 1499795 . G . PASS END=1499796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1499797 . A . PASS END=1499797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 1499798 . C . PASS END=1499798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1499799 . A . PASS END=1499799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr2 1499800 . G . PASS END=1499807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:34,0 chr2 1499808 . A . PASS END=1499808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr2 1499809 . G . PASS END=1499861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1217:0,86,255:36,0 chr2 1499862 . G . PASS END=1499879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1163:0,80,255:30,0 chr2 1499880 . T . PASS END=1499880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 1499881 . C . PASS END=1499881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 1499882 . C . PASS END=1499884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr2 1499885 . G . PASS END=1499892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:30,0 chr2 1499893 . A . PASS END=1499893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr2 1499894 . T . PASS END=1499897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 1499898 . C . PASS END=1499898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 1499899 . C T, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,14,0:0,15,0:84:172,87,0,1117,87,1117:255,90,0:0,0:1.3428e+02,8.4279e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,16:0,0,14,15 chr2 1499900 . G . PASS END=1499902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 1499903 . G . PASS END=1499919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,70,255:26,0 chr2 1499920 . C . PASS END=1499920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:18,0 chr2 1499921 . A . PASS END=1499926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:18,0 chr2 1499927 . A C, 118.77 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,12,0:0,12,0:69:157,72,0,889,72,889:255,72,0:0,0:1.1877e+02,6.8767e+01,5.1772e-07,4.5000e+02,1.0354e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,15:0,0,13,11 chr2 1499928 . C . PASS END=1499952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 1499953 . G . PASS END=1499964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 1499965 . T . PASS END=1499969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr2 1500367 . A . PASS END=1500368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1227:0,102,255:35,0 chr2 1500369 . G . PASS END=1500369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:34,0 chr2 1500370 . A . PASS END=1500370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:34,0 chr2 1500371 . C . PASS END=1500371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 1500372 . A . PASS END=1500372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 1500373 . A . PASS END=1500373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:34,0 chr2 1500374 . G . PASS END=1500389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1310:0,92,255:39,0 chr2 1500390 . A . PASS END=1500390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1348:0,68,255:39,0 chr2 1500391 . G . PASS END=1500534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,98,255:40,0 chr2 1500535 . A . PASS END=1500537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,105,255:23,0 chr2 1500545 . C . PASS END=1500545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 1507708 . T . PASS END=1507708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 1507720 . A . PASS END=1507724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:19,0 chr2 1507725 . A . PASS END=1507731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:24,0 chr2 1507732 . G . PASS END=1507750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1001:0,81,255:29,0 chr2 1507751 . C . PASS END=1507751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 1507752 . C . PASS END=1507754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 1507755 . T . PASS END=1507755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 1507756 . G . PASS END=1507760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 1507761 . G . PASS END=1507761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 1507762 . C . PASS END=1507786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1209:0,86,255:36,0 chr2 1507787 . A . PASS END=1507787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1234:0,75,255:35,0 chr2 1507788 . G . PASS END=1507825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1145:0,90,255:37,0 chr2 1507826 . A . PASS END=1507842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,71,255:25,0 chr2 1507843 . C . PASS END=1507843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr2 1507844 . C . PASS END=1507847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 1507848 . G . PASS END=1507851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 1520655 . A . PASS END=1520675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1333:0,98,255:40,0 chr2 1520676 . T C, 169.49 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,26,0:0,15,0:119:207,122,0,1531,122,1531:255,123,0:0,0:1.6949e+02,1.1949e+02,0.0000e+00,4.5000e+02,1.5426e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,17:0,0,23,18 chr2 1520677 . G . PASS END=1520713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1333:0,95,255:38,0 chr2 1520714 . G . PASS END=1520739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1372:0,101,255:37,0 chr2 1520740 . G . PASS END=1520740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr2 1520741 . G . PASS END=1520754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,108,255:36,0 chr2 1540484 . A . LowGQ END=1540545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:2,0 chr2 1540546 . A . LowGQ END=1540591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:2:0,0,0:0,0,33:1,0 chr2 1540592 . CCCA C, 45.04 PASS DP=3;MQ=78.93;MQRankSum=0.736;ReadPosRankSum=0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,2,0:0.667,0.000:3:1,1,0:0,1,0:32:71,0,30,171,171,171:30,0,69:1,2:4.5042e+01,2.5246e-03,3.2597e+01,1.7981e+02,2.0581e+02,1.8282e+02:0.00,26.00,29.01,34.77,60.77,37.78:0,1,0,2:0,1,1,1 chr2 1540593 . C . LowGQ END=1540599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:3:0,0,0:0,0,27:3,3 chr2 1540600 . G . PASS END=1540602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 1540603 . C . PASS END=1540604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 1540605 . A . PASS END=1540615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr2 1540616 . T . LowGQ END=1540616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:5,0 chr2 1540617 . C . PASS END=1540642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,217:6,0 chr2 1540643 . A . PASS END=1540662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr2 1540663 . C . PASS END=1540679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr2 1540680 . T . LowGQ END=1540720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,0,0:3,0 chr2 1540721 . T C, 18.83 PASS DP=2;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,1,0:0,1,0:5:55,6,0,78,6,78:55,6,0:0,0:1.8835e+01,4.8350e+00,1.8155e+00,7.6321e+01,3.9605e+01,7.9321e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,2:0,0,1,1 chr2 1540722 . C . LowGQ END=1540769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,1:2:0:0:0,0,0:0,0,0:0,1 chr2 1540770 . T . LowDepth;LowGQ END=1540786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 1540787 . G . LowDepth;LowGQ END=1540892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr2 1540893 . C A, 12.67 PASS DP=2;MQ=24.08;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,2,0:0,0,0:4:48,6,0,48,6,48:55,6,0:0,0:1.2671e+01,4.7172e+00,2.1589e+00,4.7441e+01,3.9487e+01,5.0441e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,1:0,0,1,1 chr2 1540894 . C . PASS END=1540912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,55:2,0 chr2 1540913 . A . LowDepth;LowGQ END=1541105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,0:1,0 chr2 1541106 . A T, 5.45 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=34.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4454e+00,4.4762e+00,4.4664e+00,4.0215e+01,3.9246e+01,4.3215e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,0,1 chr2 1541107 . A . LowDepth;LowGQ END=1541191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr2 1541192 . C . LowDepth;LowGQ END=1541448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 1541449 . C . LowGQ END=1541454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,61:0,0,69:3,0 chr2 1541455 . T . PASS END=1541459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 1541460 . A . LowGQ END=1541461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,70:5,0,96:3,0 chr2 1541462 . C . PASS END=1541464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 1541465 . C . LowGQ END=1541465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,70:27,0,96:3,0 chr2 1541466 . C . PASS END=1541469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 1541470 . A . LowGQ END=1541470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 1541471 . A . PASS END=1541472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 1541473 . C . LowGQ END=1541473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 1541474 . C . PASS END=1541485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr2 1541486 . G A, 57.31 PASS DP=5;MQ=61.09;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,1,0:0,4,0:12:95,15,0,194,15,194:172,15,0:0,0:5.7312e+01,1.2312e+01,2.6295e-01,1.9119e+02,4.7082e+01,1.9419e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,2:0,0,3,2 chr2 1541487 . A . PASS END=1541500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr2 1541501 . C . PASS END=1541501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 1541502 . C . PASS END=1541503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 1541504 . A . PASS END=1541504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 1541505 . A . PASS END=1541513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr2 1541514 . A . PASS END=1541514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 1541515 . A . PASS END=1541515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr2 1541516 . A . LowGQ END=1541519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:0,0,154:6,0 chr2 1541520 . C . PASS END=1541521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 1541522 . C . PASS END=1541523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 1541524 . C . PASS END=1541526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,247:6,0 chr2 1541527 . C . PASS END=1541527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr2 1541528 . T . PASS END=1541528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 1541529 . C . PASS END=1541541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr2 1541542 . C . PASS END=1541561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,188:6,0 chr2 1541562 . A . PASS END=1541562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 1541563 . T . PASS END=1541569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr2 1541570 . C . LowGQ END=1541571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:0,0,137:4,0 chr2 1541572 . A . PASS END=1541575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 1541576 . C . LowGQ END=1541576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 1541577 . C . PASS END=1541579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 1541580 . A . LowGQ END=1541580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 1541581 . A . PASS END=1541581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 1541582 . A . LowGQ END=1541582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 1541583 . T . PASS END=1541586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 1541587 . C . LowGQ END=1541596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,61:0,0,101:3,0 chr2 1544366 . G . PASS END=1544501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:33:0,85,1256:0,85,255:40,0 chr2 1544502 . C . PASS END=1544538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:39:0,84,1375:0,84,255:39,0 chr2 1544539 . G T, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.385;ReadPosRankSum=2.077;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,24,0:0.585,0.000:41:9,11,0:8,13,0:47:85,0,48,814,568,1382:255,0,255:15,0:5.0000e+01,8.1542e-05,5.0581e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,14,10:11,6,17,7 chr2 1544540 . T . PASS END=1544555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1620:0,114,255:38,0 chr2 1544556 . T . PASS END=1544556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:34,0 chr2 1544557 . G . PASS END=1544594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:37:0,91,1480:0,91,255:40,0 chr2 1544595 . T . PASS END=1544595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1294:0,73,255:40,0 chr2 1544596 . T . PASS END=1544616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,105,1573:0,105,255:40,0 chr2 1544617 . G A, 45.76 PASS DP=45;MQ=250.00;MQRankSum=5.453;ReadPosRankSum=3.818;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,16,0:0.364,0.000:44:14,10,0:14,6,0:44:81,0,47,181,181,181:255,0,255:24,0:4.5764e+01,1.5868e-04,5.0000e+01,1.8053e+02,2.1530e+02,1.8354e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,16,7,9:12,16,5,11 chr2 1544618 . T . PASS END=1544654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:36:0,96,1388:0,108,255:40,0 chr2 1544655 . A . PASS END=1544669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr2 1544670 . G . PASS END=1544686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:24,0 chr2 1544687 . G . PASS END=1544687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 1546189 . G . PASS END=1546189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 1546193 . G . PASS END=1546252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1039:0,82,255:39,0 chr2 1546253 . A . PASS END=1546253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1064:0,69,255:35,0 chr2 1546254 . G . PASS END=1546362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:89:32:0,89,1165:0,89,255:39,0 chr2 1546363 . A . PASS END=1546364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:25,0 chr2 1546370 . G . PASS END=1546370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:20,0 chr2 1558945 . A . PASS END=1558957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,676:0,50,255:19,0 chr2 1558958 . G . PASS END=1558975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:26,0 chr2 1558976 . G . PASS END=1558991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:31,0 chr2 1558992 . T . PASS END=1558992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 1558993 . C . PASS END=1559011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1219:0,83,255:34,0 chr2 1559012 . G . PASS END=1559012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:31,0 chr2 1559013 . C . PASS END=1559250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:33:0,93,1395:0,96,255:40,0 chr2 1559251 . T . PASS END=1559251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:94:0,120,1800:0,255,255:40,0 chr2 1559252 . C . PASS END=1559252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,6:94:57:94:0,57,2710:0,57,255:40,0 chr2 1559253 . T . PASS END=1559257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:91:0,120,1800:0,213,255:40,0 chr2 1559258 . G . LowGQ END=1559258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,9:90:0:90:0,0,2565:11,0,255:40,0 chr2 1559259 . C . PASS END=1559267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:89:0,120,1800:0,234,255:40,0 chr2 1559268 . G . LowGQ END=1559268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,11:94:0:94:0,0,2662:48,0,255:40,0 chr2 1559269 . T . PASS END=1559287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,1:123:99:94:0,120,1800:0,249,255:40,0 chr2 1559288 . G C, 46.14 PASS DP=125;MQ=66.61;MQRankSum=3.528;ReadPosRankSum=5.201;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:68,55,0:0.447,0.000:123:31,28,0:37,27,0:45:81,0,47,1707,2336,4044:255,0,255:40,0:4.6141e+01,1.4859e-04,5.0050e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:52,16,40,15:45,23,31,24 chr2 1559289 . A . PASS END=1559325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:143,3:146:99:129:0,120,1800:0,255,255:40,0 chr2 1559326 . C . PASS END=1559454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:164,1:165:99:116:0,120,1800:0,189,255:40,1 chr2 1559455 . C . PASS END=1559484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,2:105:99:87:0,120,1800:0,211,255:40,0 chr2 1559485 . T . LowGQ END=1559485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,10:89:0:89:0,0,2613:98,0,255:40,0 chr2 1559486 . C . PASS END=1559491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,3:85:99:84:0,120,1800:0,206,255:40,0 chr2 1559492 . C . LowGQ END=1559492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,10:82:0:82:0,0,2380:45,0,255:40,0 chr2 1559493 . T . PASS END=1559496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,174,255:40,0 chr2 1559497 . T . LowGQ END=1559498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,30:82:0:80:0,0,865:255,0,255:40,0 chr2 1559499 . C . PASS END=1559507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,118,1800:0,118,255:40,0 chr2 1559508 . G . LowGQ END=1559508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,9:80:0:80:0,0,2268:48,0,255:40,0 chr2 1559509 . T . PASS END=1559540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:79:0,120,1800:0,158,255:40,0 chr2 1559541 . A . PASS END=1559567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:83:0,120,1800:0,125,255:40,0 chr2 1559568 . A . LowGQ END=1559568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,12:89:0:89:0,0,2361:57,0,255:40,0 chr2 1559569 . T . PASS END=1559675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:67:0,120,1800:0,124,255:40,0 chr2 1559676 . A . PASS END=1559691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:68:0,120,1800:0,129,255:40,0 chr2 1559692 . C . PASS END=1559692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,6:73:38:73:0,38,2155:0,38,255:40,0 chr2 1559693 . A . PASS END=1559712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,123,255:40,0 chr2 1559713 . A G, 46.95 PASS DP=74;MQ=107.66;MQRankSum=-4.850;ReadPosRankSum=2.566;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,41,0:0.554,0.000:74:14,18,0:19,23,0:46:82,0,48,1413,1062,2475:255,0,255:31,0:4.6950e+01,1.2011e-04,5.1277e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,16,23,18:16,17,24,17 chr2 1559714 . T . PASS END=1559750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:72:0,120,1800:0,135,255:40,0 chr2 1559751 . A . PASS END=1560081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:39:0,104,1405:0,104,255:40,0 chr2 1637976 . C . PASS END=1637983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr2 1637984 . T . PASS END=1637984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 1637985 . T . PASS END=1637994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr2 1637995 . C . PASS END=1637995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 1637996 . T . PASS END=1638005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,848:0,69,255:24,0 chr2 1638006 . G . PASS END=1638006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 1638007 . C . PASS END=1638018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr2 1638019 . C . PASS END=1638019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 1638020 . A . PASS END=1638027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 1638028 . G . PASS END=1638028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:21,0 chr2 1638029 . G . PASS END=1638036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,892:0,65,255:26,0 chr2 1638037 . A . PASS END=1638038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr2 1638039 . G . PASS END=1638040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 1638041 . G . PASS END=1638043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1638044 . C . PASS END=1638044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:24,0 chr2 1638045 . A . PASS END=1638084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr2 1638085 . A . PASS END=1638085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 1638086 . C . PASS END=1638095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 1639180 . T . PASS END=1639276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:31:0,81,1215:0,93,255:40,0 chr2 1639277 . G . PASS END=1639293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,986:0,67,255:26,0 chr2 1642618 . C . PASS END=1642750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:47:0,120,1800:0,138,255:40,0 chr2 1643074 . C . PASS END=1643194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:37:0,95,1440:0,95,255:40,0 chr2 1647140 . C . PASS END=1647170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1072:0,87,255:40,0 chr2 1647171 . T C, 169.48 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,26,0:0,15,0:119:207,122,0,1531,122,1531:255,123,0:0,0:1.6948e+02,1.1948e+02,0.0000e+00,4.5000e+02,1.5425e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,19:0,0,23,18 chr2 1647172 . A . PASS END=1647208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,106,1739:0,106,255:40,0 chr2 1647209 . G . PASS END=1647309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1260:0,96,255:40,0 chr2 1647310 . T . PASS END=1647333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,68,255:26,0 chr2 1647334 . T . PASS END=1647343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,63,255:19,0 chr2 1647344 . A . PASS END=1647344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 1647345 . C . PASS END=1647348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:14,0 chr2 1648390 . C . PASS END=1648395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 1648396 . C . PASS END=1648407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr2 1648408 . C . PASS END=1648507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1116:0,87,255:40,0 chr2 1648508 . G . PASS END=1648520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:28:0,62,911:0,62,255:26,0 chr2 1648521 . C . PASS END=1648521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 1648522 . A . PASS END=1648522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr2 1648523 . A . PASS END=1648524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:28,0 chr2 1651944 . C . PASS END=1651953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1322:0,103,255:39,0 chr2 1651954 . T . PASS END=1651954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1138:0,70,255:36,0 chr2 1651955 . C . PASS END=1651962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,116,1611:0,116,255:40,0 chr2 1651963 . T . PASS END=1651963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1293:0,65,255:39,0 chr2 1651964 . C . PASS END=1652070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1357:0,95,255:40,0 chr2 1652071 . G . PASS END=1652071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr2 1652072 . C . PASS END=1652095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1111:0,82,255:32,0 chr2 1652096 . C . PASS END=1652126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr2 1652127 . C . PASS END=1652129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 1652130 . T . PASS END=1652135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 1652136 . A . PASS END=1652136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:20,0 chr2 1652137 . G . PASS END=1652140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,65,255:22,0 chr2 1652141 . C . PASS END=1652141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 1652142 . G . PASS END=1652180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr2 1652181 . A . PASS END=1652192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:20:0,54,810:0,60,255:19,0 chr2 1652193 . C . PASS END=1652200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 1652201 . A . PASS END=1652201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr2 1652202 . A . PASS END=1652225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,808:0,63,255:23,0 chr2 1652226 . A . PASS END=1652226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr2 1652227 . C . PASS END=1652246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 1652247 . A . PASS END=1652247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 1652248 . A . PASS END=1652261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:21,0 chr2 1652262 . G . PASS END=1652264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 1652265 . A . PASS END=1652286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,62,255:25,0 chr2 1652287 . G . PASS END=1652287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,873:0,45,255:20,0 chr2 1652288 . G . PASS END=1652291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 1652292 . T . PASS END=1652292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr2 1652293 . T . PASS END=1652302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 1652303 . C . PASS END=1652303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:20,0 chr2 1652304 . C . PASS END=1652306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr2 1652307 . T . PASS END=1652307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 1652308 . A . PASS END=1652314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr2 1652315 . T . PASS END=1652315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr2 1652316 . G . PASS END=1652374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,801:0,61,255:25,0 chr2 1652375 . A . PASS END=1652375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 1652376 . G . PASS END=1652438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,864:0,69,255:26,0 chr2 1652439 . A . PASS END=1652453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,919:0,81,255:29,0 chr2 1652454 . T . PASS END=1652454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 1652455 . G . PASS END=1652510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1200:0,83,255:33,0 chr2 1652511 . A . PASS END=1652513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1020:0,76,255:29,0 chr2 1652514 . G . PASS END=1652515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 1652516 . G . PASS END=1652517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:30,0 chr2 1652518 . C . PASS END=1652518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 1652519 . G . PASS END=1652519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr2 1652520 . C . PASS END=1652520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 1652521 . C . PASS END=1652522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 1652523 . T . PASS END=1652523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr2 1652524 . C . PASS END=1652524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 1652525 . C . PASS END=1652525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 1652526 . C . PASS END=1652528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr2 1652529 . T . PASS END=1652529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 1652530 . G . PASS END=1652535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:30,0 chr2 1652536 . T . PASS END=1652537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 1652538 . A . PASS END=1652547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:28,0 chr2 1652548 . G . PASS END=1652548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 1652549 . C . PASS END=1652553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 1652554 . T . PASS END=1652554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 1652555 . G . PASS END=1652560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 1652561 . G . PASS END=1652561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 1652562 . C . PASS END=1652566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 1652567 . G . PASS END=1652567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 1652568 . T . PASS END=1652573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 1652574 . C . PASS END=1652593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:26,0 chr2 1652594 . G . PASS END=1652596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 1652597 . G . PASS END=1652600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:20,0 chr2 1652601 . A . PASS END=1652602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 1652603 . G . PASS END=1652604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 1652605 . C . PASS END=1652605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr2 1652606 . C . PASS END=1652608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 1652609 . C . PASS END=1652609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 1652610 . T . PASS END=1652611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 1652612 . C . PASS END=1652612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 1652613 . T . PASS END=1652638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,917:0,64,255:26,0 chr2 1652639 . G . PASS END=1652639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1652640 . A . PASS END=1652679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,937:0,65,255:26,0 chr2 1652680 . C . PASS END=1652682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1652683 . T . PASS END=1652683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 1652684 . G . PASS END=1652686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1652687 . C . PASS END=1652700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,907:0,64,255:26,0 chr2 1652701 . A . PASS END=1652701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,841:0,47,255:24,0 chr2 1652702 . G . PASS END=1652714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr2 1652715 . T . PASS END=1652715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 1652716 . T . PASS END=1652716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 1652717 . C . PASS END=1652720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 1652721 . G . PASS END=1652740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,71,255:25,0 chr2 1652741 . C . PASS END=1652741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:23,0 chr2 1652742 . C . PASS END=1652747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr2 1652748 . A . PASS END=1652748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:20,0 chr2 1652749 . G . PASS END=1652764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr2 1652765 . C . PASS END=1652767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,723:0,49,255:19,0 chr2 1652768 . G . PASS END=1652784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr2 1652785 . C . PASS END=1652788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr2 1652789 . A . PASS END=1652789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,759:0,3,255:22,0 chr2 1652790 . T . PASS END=1652806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,878:0,75,255:25,0 chr2 1652807 . C . PASS END=1652807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:21,0 chr2 1652808 . A . PASS END=1652810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr2 1652811 . T . PASS END=1652821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,49,255:19,0 chr2 1652822 . T G, 106.73 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,9,0:0,11,0:57:145,60,0,722,60,722:255,60,0:0,0:1.0673e+02,5.6728e+01,9.3190e-06,4.5000e+02,9.1498e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,12:0,0,11,9 chr2 1652823 . A . PASS END=1652851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,574:0,44,255:17,0 chr2 1652852 . C . PASS END=1652852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr2 1652853 . C . PASS END=1652853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 1652854 . G . PASS END=1652859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 1652860 . A . PASS END=1652861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 1652862 . A . PASS END=1652862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr2 1652863 . C . PASS END=1652873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 1652874 . A . PASS END=1652874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:13,0 chr2 1652875 . G . PASS END=1652882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 1652883 . G . PASS END=1652883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 1652884 . T . PASS END=1652886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 1652887 . T . PASS END=1652887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 1652888 . G . PASS END=1652890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 1652891 . G . PASS END=1652891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 1652892 . C . PASS END=1652892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 1652893 . T . PASS END=1652893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 1652894 . G . PASS END=1652895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 1652896 . C . PASS END=1652896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 1652897 . G . PASS END=1652912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:17,0 chr2 1652913 . C . PASS END=1652921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,535:0,31,255:12,0 chr2 1652922 . A . PASS END=1652922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,442:0,6,255:11,0 chr2 1652923 . A . PASS END=1652925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 1652926 . T . PASS END=1652926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr2 1652927 . G . PASS END=1652938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:12,0 chr2 1652939 . G . PASS END=1652939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 1652940 . C . PASS END=1652941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:12,0 chr2 1652942 . C . PASS END=1652942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 1652943 . C . PASS END=1652943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr2 1652944 . T . PASS END=1652952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 1652953 . A . PASS END=1652953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 1652954 . G . PASS END=1652954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 1652955 . T . LowGQ END=1652955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,382:0,0,255:11,0 chr2 1652956 . C . PASS END=1652956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 1652957 . A . LowGQ END=1652968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:13:0,0,250:0,0,255:12,0 chr2 1652969 . C . PASS END=1652969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 1652970 . A . LowGQ END=1652973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:14:0,0,216:5,0,255:10,0 chr2 1652974 . C . PASS END=1652974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 1652975 . A . LowGQ END=1652977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:14:0,0,296:33,0,255:11,0 chr2 1652978 . G . PASS END=1652978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,398:0,15,255:13,0 chr2 1652979 . A . LowGQ END=1652981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,384:29,0,255:15,0 chr2 1652982 . C . PASS END=1652982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 1652983 . A . LowGQ END=1652986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,393:10,0,255:17,0 chr2 1652987 . G . PASS END=1652987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:16,0 chr2 1652988 . G . LowGQ END=1652988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,382:68,0,255:14,0 chr2 1652989 . G . PASS END=1652989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,546:0,40,255:17,0 chr2 1652990 . G . PASS END=1652990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:16,0 chr2 1652991 . T . LowGQ END=1652991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,5:19:0:19:0,0,357:40,0,255:13,0 chr2 1652992 . C . PASS END=1652999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:18,0 chr2 1653000 . C . PASS END=1653000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr2 1653001 . A . PASS END=1653002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 1653003 . A . PASS END=1653003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr2 1653004 . C . PASS END=1653005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr2 1653006 . T . PASS END=1653006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 1653007 . T . PASS END=1653007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 1653008 . G . PASS END=1653010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:22,0 chr2 1653011 . G . PASS END=1653011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr2 1653012 . C . PASS END=1653016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,808:0,66,255:25,0 chr2 1653017 . C . PASS END=1653017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:23,0 chr2 1653018 . T . PASS END=1653024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 1653025 . C . PASS END=1653025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 1653026 . G . PASS END=1653029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 1653030 . A . PASS END=1653030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:22,0 chr2 1653031 . A . PASS END=1653035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 1653036 . G . PASS END=1653036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 1653037 . C . PASS END=1653040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 1653041 . G . PASS END=1653041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 1653042 . C . PASS END=1653042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 1653043 . T . PASS END=1653043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 1653044 . C . PASS END=1653044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 1653045 . A . PASS END=1653063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,909:0,75,255:25,0 chr2 1653064 . C . PASS END=1653064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 1653065 . G . PASS END=1653065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 1653066 . A . PASS END=1653066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 1653067 . G . PASS END=1653080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,953:0,62,255:24,0 chr2 1653081 . A . PASS END=1653081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr2 1653082 . A . PASS END=1653082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 1653083 . C . PASS END=1653084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,869:0,56,255:22,0 chr2 1653085 . G . PASS END=1653118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,864:0,66,255:24,0 chr2 1653119 . G . PASS END=1653123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 1653124 . G . PASS END=1653126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 1653127 . T . PASS END=1653127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 1653128 . G . PASS END=1653136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 1653137 . C . PASS END=1653137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 1653138 . G . PASS END=1653149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 1653150 . G . PASS END=1653266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr2 1653267 . G . PASS END=1653278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr2 1653279 . G . PASS END=1653280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:18,0 chr2 1653281 . G . PASS END=1653344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,892:0,62,255:26,0 chr2 1653345 . C . PASS END=1653345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 1653346 . A . PASS END=1653346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 1653347 . C . PASS END=1653347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 1653348 . A . PASS END=1653370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:24:0,68,892:0,68,255:26,0 chr2 1653371 . C . PASS END=1653371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr2 1653372 . C . PASS END=1653395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr2 1653396 . T . PASS END=1653396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,596:0,52,255:20,0 chr2 1653397 . T . PASS END=1653402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 1653403 . T . PASS END=1653447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:20,0 chr2 1657320 . C . PASS END=1657550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:40:0,104,1370:0,104,255:40,0 chr2 1657551 . A . PASS END=1657551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1357:0,73,255:35,0 chr2 1657552 . G . PASS END=1657557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,101,1396:0,101,255:36,0 chr2 1658172 . C . PASS END=1658280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,118,1800:0,118,255:40,0 chr2 1664653 . C . PASS END=1664653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr2 1664654 . A G, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.951;ReadPosRankSum=1.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,18,0:0.529,0.000:34:9,8,0:7,10,0:48:85,0,50,644,572,1216:255,0,255:16,0:5.0000e+01,6.6527e-05,5.2748e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,4,9,9:7,9,9,9 chr2 1664655 . T . PASS END=1664691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1172:0,85,255:40,0 chr2 1664692 . T . PASS END=1664756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:36:0,102,1285:0,102,255:40,0 chr2 1664757 . A . PASS END=1664757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1089:0,74,255:34,0 chr2 1664758 . A . PASS END=1664799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1233:0,99,255:36,0 chr2 1664800 . G . PASS END=1664809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,83,255:25,0 chr2 1665838 . G . PASS END=1665838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 1665844 . C . PASS END=1665956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:31:0,86,1191:0,86,255:40,0 chr2 1667377 . C . PASS END=1667386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1225:0,86,255:33,0 chr2 1667387 . C . PASS END=1667387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr2 1667388 . A . PASS END=1667427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1182:0,88,255:40,0 chr2 1667428 . T . PASS END=1667428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:37,0 chr2 1667429 . G . PASS END=1667515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1166:0,83,255:40,0 chr2 1667516 . G . PASS END=1667526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:26,0 chr2 1667527 . G . PASS END=1667528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 1667529 . T . PASS END=1667530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr2 1667531 . G . PASS END=1667533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1667534 . C . PASS END=1667535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 1668730 . C . PASS END=1668730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 1668731 . T . PASS END=1668731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr2 1668732 . C . PASS END=1668736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,86,255:29,0 chr2 1668737 . G . PASS END=1668737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 1668738 . G . PASS END=1668738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 1668739 . T . PASS END=1668739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:27,0 chr2 1668740 . C . PASS END=1668744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 1668745 . C . PASS END=1668745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:28,0 chr2 1668746 . G . PASS END=1668746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,795:0,37,255:26,0 chr2 1668747 . A . PASS END=1668750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,967:0,84,255:29,0 chr2 1668751 . C . PASS END=1668751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,856:0,54,255:27,0 chr2 1668752 . G . PASS END=1668754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 1668755 . C . PASS END=1668755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,935:0,70,255:28,0 chr2 1668756 . G . PASS END=1668757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 1668758 . C . PASS END=1668758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,886:0,54,255:27,0 chr2 1668759 . G . PASS END=1668762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:89:30:0,89,939:0,89,255:30,0 chr2 1668763 . T . PASS END=1668763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:29,0 chr2 1668764 . G . PASS END=1668766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1144:0,99,255:33,0 chr2 1668767 . C . PASS END=1668767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,919:0,49,255:30,0 chr2 1668768 . T . PASS END=1668771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1203:0,99,255:33,0 chr2 1668772 . C . PASS END=1668772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,989:0,65,255:30,0 chr2 1668773 . T . PASS END=1668781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1063:0,82,255:33,0 chr2 1668782 . G . PASS END=1668782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,830:0,35,255:29,0 chr2 1668783 . A . PASS END=1668789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1279:0,89,255:33,0 chr2 1668790 . C . PASS END=1668790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,952:0,38,255:29,0 chr2 1668791 . G . PASS END=1668805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:31:0,85,1016:0,85,255:30,0 chr2 1668806 . A . PASS END=1668806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,817:0,78,255:29,0 chr2 1668807 . A . PASS END=1668811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 1668812 . T . PASS END=1668819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,73,255:27,0 chr2 1668820 . G . PASS END=1668831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,49,255:17,0 chr2 1668832 . T . PASS END=1668832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 1668833 . G . PASS END=1668846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,612:0,48,255:16,0 chr2 1669986 . C . PASS END=1670004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,996:0,84,255:30,0 chr2 1670005 . G . PASS END=1670005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 1670006 . G . PASS END=1670007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 1670008 . G . PASS END=1670008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 1670009 . G . PASS END=1670010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 1670011 . A . PASS END=1670011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 1670012 . T . PASS END=1670017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1125:0,93,255:32,0 chr2 1670018 . C . PASS END=1670018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:33,0 chr2 1670019 . T . PASS END=1670032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1178:0,86,255:35,0 chr2 1670033 . G . PASS END=1670033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:35,0 chr2 1670034 . T . PASS END=1670127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1266:0,90,255:40,0 chr2 1670128 . C . PASS END=1670164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1215:0,91,255:38,0 chr2 1670165 . G A, 49.67 PASS DP=33;MQ=249.41;MQRankSum=4.154;ReadPosRankSum=3.248;FractionInformativeReads=0.970;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,15,0:0.469,0.000:32:6,5,0:11,10,0:48:84,0,50,508,608,1115:255,0,255:14,0:4.9674e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,7,7,8:9,8,5,10 chr2 1670166 . G . PASS END=1670176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 1670177 . C . PASS END=1670177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr2 1670178 . C . PASS END=1670179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 1670180 . G . PASS END=1670181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 1670182 . G . PASS END=1670182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 1670183 . G . PASS END=1670202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr2 1670203 . G . PASS END=1670215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,921:0,62,255:23,0 chr2 1670216 . A . PASS END=1670216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr2 1670217 . G . PASS END=1670217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:20,0 chr2 1670218 . C . PASS END=1670237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:21,0 chr2 1670238 . G . PASS END=1670258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,599:0,43,255:19,0 chr2 1677415 . C . PASS END=1677435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,909:0,75,255:26,0 chr2 1677436 . G . PASS END=1677449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:30,0 chr2 1677450 . G . PASS END=1677450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr2 1677451 . T . PASS END=1677473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1095:0,80,255:32,0 chr2 1677474 . T . PASS END=1677474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:30,0 chr2 1677475 . T . PASS END=1677573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1172:0,88,255:40,0 chr2 1677574 . T . PASS END=1677584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,77,255:26,0 chr2 1680699 . T . PASS END=1680701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 1680702 . T . PASS END=1680721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:29,0 chr2 1680722 . A . PASS END=1680722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 1680723 . G . PASS END=1680734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1096:0,90,255:31,0 chr2 1680735 . C . PASS END=1680735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:30,0 chr2 1680736 . C . PASS END=1680762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:32:0,87,1251:0,89,255:35,0 chr2 1680763 . T . PASS END=1680775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:74:30:0,74,1092:0,74,255:26,0 chr2 1680776 . C . PASS END=1680776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1680777 . A . PASS END=1680777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 1680778 . C . PASS END=1680785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 1680786 . T . PASS END=1680786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 1680787 . C . PASS END=1680788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 1680789 . T . PASS END=1680789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:29,0 chr2 1680790 . G . PASS END=1680792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 1680793 . G . PASS END=1680794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 1680795 . T . PASS END=1680797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 1680798 . G . PASS END=1680798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 1680799 . A . PASS END=1680800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 1680801 . G . PASS END=1680811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1069:0,71,255:28,0 chr2 1680812 . C . PASS END=1680812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr2 1680813 . C . PASS END=1680816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:25,0 chr2 1683965 . C . PASS END=1684080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:35:0,88,1211:0,88,255:40,0 chr2 1684081 . T . PASS END=1684081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr2 1684082 . C . PASS END=1684087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr2 1684088 . A . PASS END=1684088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1128:0,77,255:31,0 chr2 1684089 . C . PASS END=1684095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:30,0 chr2 1684096 . A . PASS END=1684102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1195:0,66,255:31,0 chr2 1684103 . A . PASS END=1684103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 1684104 . G . PASS END=1684104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:29,0 chr2 1684105 . T . PASS END=1684105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 1684106 . C . PASS END=1684126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,990:0,60,255:27,0 chr2 1684127 . C . PASS END=1684127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:21,0 chr2 1684128 . C . PASS END=1684128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 1684129 . A . PASS END=1684129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 1684130 . G . PASS END=1684134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr2 1687428 . A . PASS END=1687499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:83:0,120,1800:0,214,255:40,0 chr2 1687852 . A . PASS END=1687923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,102,1530:0,141,255:40,0 chr2 1691404 . A . PASS END=1691475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,109,1565:0,109,255:40,0 chr2 1695700 . A . PASS END=1695771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:69:0,120,1800:0,194,255:40,0 chr2 1696301 . A . PASS END=1696304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1696305 . T . PASS END=1696321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,978:0,67,255:26,0 chr2 1696322 . G . PASS END=1696322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 1696323 . C . PASS END=1696324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 1696325 . G . PASS END=1696325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 1696326 . A . PASS END=1696331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr2 1696332 . A . PASS END=1696332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:20,0 chr2 1696333 . C . PASS END=1696335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr2 1696336 . G . PASS END=1696336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:20,0 chr2 1696337 . C . PASS END=1696337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 1696338 . T . PASS END=1696342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,53,255:18,0 chr2 1696835 . A . PASS END=1696906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,144,255:40,0 chr2 1748028 . A . PASS END=1748028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 1748029 . G . PASS END=1748029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 1748030 . G . PASS END=1748030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr2 1748031 . A . PASS END=1748031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:7,0 chr2 1748032 . T . PASS END=1748046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,235:8,0 chr2 1748047 . C . LowGQ END=1748048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,202:0,0,217:7,0 chr2 1748049 . A . PASS END=1748073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 1748074 . G . PASS END=1748075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 1748076 . T . PASS END=1748082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 1748083 . A . PASS END=1748083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 1748084 . G . PASS END=1748099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 1748100 . A . LowGQ END=1748100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:11,0 chr2 1748101 . A . PASS END=1748138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr2 1748139 . T . PASS END=1748157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr2 1748158 . T . PASS END=1748204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 1748205 . G . PASS END=1748227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:2:0,3,45:0,6,70:3,0 chr2 1795008 . T . PASS END=1795034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:72:0,120,1800:0,200,255:40,0 chr2 1795639 . T . PASS END=1795779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,133,255:40,0 chr2 1796081 . T . PASS END=1796081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 1796082 . C . PASS END=1796082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 1796083 . A . PASS END=1796103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1095:0,87,255:33,0 chr2 1796104 . G . PASS END=1796104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 1796105 . C . PASS END=1796221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,93,255:40,0 chr2 1796222 . C . PASS END=1796222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 1796223 . T . PASS END=1796236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:29,0 chr2 1805462 . T . PASS END=1805571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:70:0,120,1800:0,204,255:40,0 chr2 1812848 . C . PASS END=1812897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,832:0,72,255:26,0 chr2 1812898 . G . PASS END=1812898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 1812899 . C . PASS END=1812899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 1812900 . C . PASS END=1812902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 1812903 . C . PASS END=1812903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:26,0 chr2 1812904 . T . PASS END=1812904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 1812905 . T . PASS END=1812939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,64,255:26,0 chr2 1812941 . T . PASS END=1812941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 1820782 . T . PASS END=1820787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,706:0,57,255:19,0 chr2 1820788 . C . PASS END=1820788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 1834551 . C . PASS END=1834558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:6:10:0,6,90:0,30,255:3,0 chr2 1834559 . A . PASS END=1834583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:12:14:0,12,180:0,12,255:4,0 chr2 1834584 . G . PASS END=1834588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:24:21:0,24,360:0,63,255:8,0 chr2 1834589 . CG C, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=1.702;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:8,13,0:0.619,0.000:21:1,8,0:7,5,0:45:80,0,44,180,180,180:255,0,247:8,17:5.0000e+01,1.2270e-04,4.7392e+01,1.8477e+02,2.1477e+02,1.8778e+02:0.00,30.00,33.01,34.77,64.77,37.78:6,2,8,5:3,5,5,8:1834589 chr2 1834590 . G . LowGQ END=1834591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,17:25:0:21:0,0,0:255,0,227:21,17 chr2 1834592 . C . PASS END=1834595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 1834596 . T C, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=1.629;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:8,13,0:0.619,0.000:21:1,8,0:7,5,0:45:85,0,44,185,185,185:255,0,247:8,0:5.0000e+01,1.2270e-04,4.7392e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,2,8,5:3,5,5,8:1834589 chr2 1834597 . G . PASS END=1834639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr2 1834640 . C . PASS END=1834642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 1834643 . C . PASS END=1834643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 1834644 . T . PASS END=1834652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr2 1834653 . G . PASS END=1834668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 1834669 . T . PASS END=1834681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr2 1834682 . C . PASS END=1834690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 1834691 . A . PASS END=1834691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 1834692 . C . PASS END=1834692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:13,0 chr2 1838514 . T . PASS END=1838529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:83:50:0,83,1800:0,83,255:40,0 chr2 1838530 . G . PASS END=1838530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:69:59:0,69,2002:0,69,255:40,0 chr2 1838531 . T . PASS END=1838548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:89:59:0,89,1800:0,89,255:40,0 chr2 1838549 . C . PASS END=1838549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,5:81:49:81:0,49,2593:0,49,255:40,0 chr2 1838550 . A . PASS END=1838577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:80:84:0,80,1800:0,80,255:40,0 chr2 1838578 . C . PASS END=1838616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:99:98:0,120,1800:0,162,255:40,0 chr2 1838617 . C T, 48.74 PASS DP=103;MQ=98.58;MQRankSum=-0.403;ReadPosRankSum=3.116;FractionInformativeReads=0.854;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,39,0:0.443,0.000:88:23,24,0:26,15,0:47:84,0,50,1162,1466,2628:255,0,255:40,0:4.8738e+01,7.9730e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,24,23,16:31,18,26,13 chr2 1838618 . A . PASS END=1838626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:94:0,120,1800:0,211,255:40,0 chr2 1838627 . A G, 0.63 DRAGENSnpHardQUAL DP=92;MQ=78.89;MQRankSum=-3.797;ReadPosRankSum=4.756;FractionInformativeReads=0.891;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:66,16,0:0.195,0.000:82:35,9,0:31,7,0:9:27,0,50,369,2013,2382:255,0,255:40,0:6.3299e-01,8.6765e+00,6.1427e+01,3.7739e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:36,30,8,8:39,27,11,5 chr2 1838628 . G . PASS END=1838647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:91:0,120,1800:0,246,255:40,0 chr2 1838648 . C G, 34.46 PASS DP=97;MQ=66.16;MQRankSum=-1.917;ReadPosRankSum=0.684;FractionInformativeReads=0.990;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:66,30,0:0.312,0.000:96:32,19,0:34,11,0:34:69,0,48,885,2043,2928:255,0,255:40,0:3.4464e+01,1.5928e-03,5.0502e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:34,32,17,13:28,38,20,10 chr2 1838649 . A . PASS END=1838656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:90:0,120,1800:0,240,255:40,0 chr2 1838657 . T C, 40.85 PASS DP=91;MQ=61.14;MQRankSum=-2.641;ReadPosRankSum=0.167;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:60,30,0:0.333,0.000:90:31,19,0:29,11,0:40:76,0,44,176,176,176:255,0,255:40,0:4.0855e+01,4.4034e-04,4.7150e+01,1.7562e+02,2.1039e+02,1.7863e+02:0.00,34.77,37.78,34.77,69.54,37.78:28,32,19,11:27,33,16,14 chr2 1838658 . G . PASS END=1838659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:88:0,120,1800:0,248,255:40,0 chr2 1838660 . G . LowGQ END=1838660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,13:88:0:88:0,0,2291:179,0,255:40,0 chr2 1838661 . G . PASS END=1838676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:79:0,120,1800:0,219,255:40,0 chr2 1838677 . T C, 30.08 PASS DP=79;MQ=59.13;MQRankSum=-7.582;ReadPosRankSum=-1.729;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,36,0:0.462,0.000:78:21,21,0:21,15,0:30:65,0,44,165,165,165:255,0,255:40,0:3.0081e+01,4.3479e-03,4.7154e+01,1.6485e+02,1.9962e+02,1.6786e+02:0.00,34.77,37.78,34.77,69.54,37.78:25,17,22,14:22,20,19,17 chr2 1838678 . C . PASS END=1838680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:77:0,120,1800:0,201,255:40,0 chr2 1838681 . C . LowGQ END=1838681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,12:78:0:78:0,0,2055:164,0,255:40,0 chr2 1838682 . A . PASS END=1838713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,3:73:99:69:0,120,1800:0,170,255:40,0 chr2 1838714 . C . PASS END=1838714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,6:74:12:74:0,12,2305:0,12,255:40,0 chr2 1838715 . A . PASS END=1838719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:74:0,120,1800:0,189,255:40,0 chr2 1838720 . A C, 5.14 DRAGENSnpHardQUAL DP=73;MQ=57.00;MQRankSum=-6.812;ReadPosRankSum=0.894;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,23,0:0.319,0.000:72:23,13,0:26,10,0:5:38,0,45,808,1602,2411:255,0,255:40,0:5.1364e+00,1.5893e+00,4.9464e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,24,12,11:25,24,12,11 chr2 1838721 . C . PASS END=1838755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,175,255:40,0 chr2 1838756 . C . LowGQ END=1838756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,11:81:0:81:0,0,2257:101,0,255:40,0 chr2 1838757 . G . PASS END=1838788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:75:0,119,1800:0,119,255:40,0 chr2 1838789 . C . LowGQ END=1838789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,29:75:0:75:0,0,726:255,0,255:40,0 chr2 1838790 . G . PASS END=1838805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,173,255:40,0 chr2 1838806 . G A, 0.01 DRAGENSnpHardQUAL DP=70;MQ=53.54;MQRankSum=-4.193;ReadPosRankSum=6.372;FractionInformativeReads=0.843;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:37,22,0:0.373,0.000:59:17,7,0:20,15,0:27:8,0,47,119,1125,1244:255,0,255:35,0:8.7606e-03,2.6957e+01,7.7257e+01,1.4601e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,18,10,12:25,12,11,11 chr2 1838807 . C . PASS END=1838843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,152,255:40,0 chr2 1838844 . T . PASS END=1838913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:40:0,81,1215:0,93,255:40,0 chr2 1838914 . C . PASS END=1838925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,1035:0,66,255:26,0 chr2 1838926 . T . PASS END=1838926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 1838927 . C . PASS END=1838928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 1838929 . G . PASS END=1838929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 1838930 . C . PASS END=1838932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:22,0 chr2 1838933 . C . PASS END=1838952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,778:0,61,255:22,0 chr2 1838953 . T . PASS END=1838953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr2 1838954 . T . PASS END=1838960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,839:0,69,255:23,0 chr2 1838961 . A . PASS END=1838961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 1838962 . C . PASS END=1838963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 1838964 . A G, 50.00 PASS DP=23;MQ=235.74;MQRankSum=1.581;ReadPosRankSum=2.485;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,15,0:0.652,0.000:23:6,5,0:2,10,0:46:85,0,45,528,228,757:255,0,197:7,0:5.0000e+01,1.1934e-04,4.7575e+01,4.5000e+02,2.6325e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,4,11:5,3,8,7 chr2 1838965 . T . PASS END=1838967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 1841372 . T . PASS END=1841374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 1841375 . A . PASS END=1841381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr2 1841382 . A . PASS END=1841382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 1841383 . C . PASS END=1841385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 1841386 . G . PASS END=1841422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,537:0,40,255:19,0 chr2 1841423 . G T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=2.430;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,12,0:0.600,0.000:20:4,5,0:4,7,0:46:85,0,45,185,185,185:255,0,250:7,0:5.0000e+01,1.0846e-04,4.8252e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,4,7,5:6,2,4,8 chr2 1841424 . A . PASS END=1841424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr2 1841425 . G . PASS END=1841432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,900:0,69,255:24,0 chr2 1841433 . C . PASS END=1841433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 1841434 . G . PASS END=1841460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,832:0,61,255:26,0 chr2 1841461 . C . PASS END=1841478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:24,0 chr2 1841479 . C . PASS END=1841479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 1841480 . T . PASS END=1841481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 1841482 . T . PASS END=1841482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 1841483 . C . PASS END=1841485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 1841486 . C . PASS END=1841486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 1841487 . T . PASS END=1841490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 1841491 . C . PASS END=1841528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,692:0,53,255:19,0 chr2 1841529 . T . PASS END=1841529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:16,0 chr2 1841530 . C . PASS END=1841535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:17,0 chr2 1841536 . G . PASS END=1841572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 1841573 . G . PASS END=1841573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 1841574 . G . PASS END=1841594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr2 1841595 . A . PASS END=1841595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 1841596 . A . PASS END=1841612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 1842917 . T . PASS END=1842917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr2 1842918 . C . PASS END=1842930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:9,0 chr2 1842931 . T . PASS END=1842938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 1842939 . C . PASS END=1842946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 1842947 . G . PASS END=1842961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:17,0 chr2 1842962 . G . PASS END=1842967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 1842968 . T C, 50.00 PASS DP=22;MQ=245.95;MQRankSum=2.605;ReadPosRankSum=-0.165;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:3,5,0:7,7,0:48:85,0,50,410,358,768:255,0,255:10,0:5.0000e+01,6.7304e-05,5.2607e+01,4.1010e+02,3.9244e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,2,8,4:3,7,7,5 chr2 1842969 . C . PASS END=1842987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,808:0,66,255:26,0 chr2 1842988 . T . PASS END=1843005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 1843006 . A . PASS END=1843024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr2 1843025 . G . PASS END=1843025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 1843026 . C . PASS END=1843027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 1843028 . A . PASS END=1843028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 1843029 . T . PASS END=1843039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr2 1843040 . G . PASS END=1843045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 1843046 . C . PASS END=1843053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr2 1843054 . T . PASS END=1843057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 1843058 . C . PASS END=1843064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1843065 . G . PASS END=1843101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:24,0 chr2 1843102 . C . PASS END=1843138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:19,0 chr2 1843139 . A . PASS END=1843142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:11,0 chr2 1844532 . C . PASS END=1844614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,153,255:40,0 chr2 1844615 . G . PASS END=1844632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,146,255:40,0 chr2 1855413 . C . PASS END=1855475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,131,255:40,0 chr2 1863960 . T . PASS END=1863981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 1863982 . A . PASS END=1863995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 1863996 . A . PASS END=1864020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 1864021 . C . LowGQ END=1864021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 1864022 . G . PASS END=1864023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 1883331 . T . PASS END=1883351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:87:0,120,1800:0,226,255:40,0 chr2 1883352 . T . PASS END=1883361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:83:0,120,1800:0,245,255:40,0 chr2 1887794 . T . PASS END=1887863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,182,255:40,0 chr2 1889203 . C . PASS END=1889266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:37:0,93,1395:0,104,255:40,0 chr2 1890307 . T . PASS END=1890314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr2 1890315 . G . PASS END=1890316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 1890317 . T . PASS END=1890317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr2 1890318 . C . PASS END=1890375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1174:0,83,255:37,0 chr2 1890376 . C . PASS END=1890379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:34:0,78,1170:0,102,255:26,0 chr2 1890831 . C . PASS END=1890893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,147,255:40,0 chr2 1891259 . C . PASS END=1891276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1034:0,80,255:32,0 chr2 1891277 . G . PASS END=1891277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:31,0 chr2 1891278 . C . PASS END=1891381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:33:0,92,1205:0,92,255:40,0 chr2 1893013 . A . PASS END=1893014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:18,0 chr2 1893015 . T . PASS END=1893015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 1893016 . A . PASS END=1893017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 1893018 . T . PASS END=1893018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 1893019 . G . PASS END=1893020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 1893021 . C . PASS END=1893024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr2 1893025 . G . PASS END=1893026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 1893027 . A . PASS END=1893030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 1893031 . G . PASS END=1893034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 1893035 . T . PASS END=1893035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 1893036 . C . PASS END=1893037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 1893038 . T . PASS END=1893038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 1893039 . C . PASS END=1893039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 1893040 . T . PASS END=1893040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 1893041 . A . PASS END=1893047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr2 1893048 . G . PASS END=1893048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 1893049 . G . PASS END=1893051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 1893052 . T . PASS END=1893053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 1893054 . T . PASS END=1893055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 1893056 . A . PASS END=1893056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 1893057 . T . PASS END=1893066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,903:0,78,255:26,0 chr2 1893067 . G . PASS END=1893078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr2 1893079 . G . PASS END=1893079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr2 1893080 . T . PASS END=1893081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 1893082 . C . PASS END=1893082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 1893083 . C . PASS END=1893099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr2 1893100 . C . PASS END=1893100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 1893101 . A . PASS END=1893102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 1893103 . C . PASS END=1893103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 1893104 . T . PASS END=1893106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 1893107 . A . PASS END=1893107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 1893108 . A . PASS END=1893115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 1893116 . T . PASS END=1893116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 1893117 . T . PASS END=1893125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 1893126 . C . PASS END=1893126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 1893127 . T . PASS END=1893130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 1893131 . T . PASS END=1893131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 1893132 . G . PASS END=1893135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 1893136 . C . PASS END=1893142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 1893143 . G . PASS END=1893145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1893146 . A . PASS END=1893175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,71,255:26,0 chr2 1893176 . C . PASS END=1893176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 1893177 . A . PASS END=1893177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 1893178 . G . PASS END=1893178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 1893179 . C . PASS END=1893179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr2 1893180 . T . PASS END=1893188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr2 1893189 . G . PASS END=1893190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 1893191 . C . PASS END=1893193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr2 1893194 . T . PASS END=1893195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1893196 . C . PASS END=1893196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr2 1893197 . T . PASS END=1893197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 1893198 . T . PASS END=1893202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:28,0 chr2 1893203 . A . PASS END=1893203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 1893204 . T . PASS END=1893206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 1893207 . T . PASS END=1893211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 1893212 . T . PASS END=1893212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,961:0,37,255:22,0 chr2 1893213 . C . PASS END=1893218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:25,0 chr2 1893219 . T . PASS END=1893219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1893220 . C . PASS END=1893233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,862:0,64,255:25,0 chr2 1893234 . C . PASS END=1893234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr2 1893235 . C . PASS END=1893236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 1893237 . C . PASS END=1893249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:19:0,47,751:0,47,255:19,0 chr2 1895809 . C . PASS END=1895811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 1895812 . C . PASS END=1895812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 1895813 . G . PASS END=1895814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 1895815 . G . PASS END=1895815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 1895816 . G . PASS END=1895820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,668:0,41,255:19,0 chr2 1895821 . C . PASS END=1895821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 1895822 . A . PASS END=1895822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:18,0 chr2 1895823 . G . PASS END=1895839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:23,0 chr2 1895840 . C . PASS END=1895840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 1895841 . T . PASS END=1895841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:22,0 chr2 1895842 . C . PASS END=1895842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,765:0,22,255:20,0 chr2 1895843 . A . PASS END=1895843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 1895844 . G . PASS END=1895844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr2 1895845 . G . PASS END=1895845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 1895846 . T . PASS END=1895846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 1895847 . T . PASS END=1895847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr2 1895848 . C . PASS END=1895850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 1895851 . C . PASS END=1895851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 1895852 . G . PASS END=1895854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 1895855 . A . PASS END=1895855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 1895856 . T . PASS END=1895940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,831:0,64,255:25,0 chr2 1895941 . C . PASS END=1895941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,861:0,31,255:21,0 chr2 1895942 . T . PASS END=1895946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr2 1895947 . G . PASS END=1895947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:22,0 chr2 1895948 . C . PASS END=1895951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 1895952 . T . PASS END=1895952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,837:0,36,255:20,0 chr2 1895953 . G . PASS END=1895954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 1895955 . T . PASS END=1895964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 1895965 . G . PASS END=1895969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 1895970 . C . PASS END=1895970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 1895971 . C . PASS END=1895977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,49,255:19,0 chr2 1895978 . C . PASS END=1895986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:19:0,39,585:0,40,255:13,0 chr2 1895987 . T . PASS END=1895998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr2 1895999 . C . PASS END=1895999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr2 1896000 . T . PASS END=1896004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr2 1896005 . G . PASS END=1896005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 1896006 . C . PASS END=1896016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr2 1896017 . G . PASS END=1896017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr2 1896018 . T . PASS END=1896018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 1896019 . G . PASS END=1896019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr2 1896020 . C . PASS END=1896026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 1896027 . T . PASS END=1896027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 1896028 . G . PASS END=1896036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,541:0,45,255:15,0 chr2 1896037 . G . PASS END=1896037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr2 1896038 . G . PASS END=1896059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,413:0,36,255:13,0 chr2 1906847 . C . PASS END=1906847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 1906852 . C . PASS END=1906852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 1906853 . A . PASS END=1907044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:29:0,82,1078:0,82,255:40,0 chr2 1907045 . C . PASS END=1907056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,67,255:26,0 chr2 1907057 . G . PASS END=1907066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,56,255:19,0 chr2 1914012 . C . PASS END=1914029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1117:0,80,255:37,0 chr2 1914030 . G . PASS END=1914030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1166:0,56,255:35,0 chr2 1914031 . C . PASS END=1914119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1334:0,81,255:40,0 chr2 1915792 . C . PASS END=1915882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1264:0,92,255:40,0 chr2 1920977 . T . PASS END=1921078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,101,1374:0,101,255:40,0 chr2 1921079 . A . PASS END=1921079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1474:0,77,255:39,0 chr2 1921080 . C . PASS END=1921111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:36:0,85,1017:0,85,255:40,0 chr2 1926058 . C . PASS END=1926184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:36:0,89,1210:0,89,255:40,0 chr2 1926185 . C . PASS END=1926185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:6:37:0,6,964:0,6,255:32,0 chr2 1926186 . A . PASS END=1926186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:38:37:0,38,1016:0,38,255:33,0 chr2 1926187 . T . PASS END=1926187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 1926188 . C . PASS END=1926188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1255:0,64,255:34,0 chr2 1926189 . T . PASS END=1926194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1268:0,97,255:37,0 chr2 1926195 . C . PASS END=1926195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1368:0,71,255:34,0 chr2 1926196 . T . PASS END=1926242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1202:0,86,255:35,0 chr2 1926243 . A . PASS END=1926243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 1926244 . G . PASS END=1926244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:27,0 chr2 1926245 . G . PASS END=1926245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 1926246 . G . PASS END=1926246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr2 1926247 . T . PASS END=1926247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 1926248 . C . PASS END=1926248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 1926249 . A . PASS END=1926253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 1926254 . C . PASS END=1926254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 1926255 . C . PASS END=1926258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 1926259 . T . PASS END=1926259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 1926260 . G . PASS END=1926264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 1926265 . T . PASS END=1926265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 1926266 . G . PASS END=1926269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 1926270 . A . PASS END=1926270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1008:0,43,255:26,0 chr2 1926271 . A . PASS END=1926271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 1926272 . C . PASS END=1926286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,71,255:25,0 chr2 1926287 . G . PASS END=1926287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 1926288 . T . PASS END=1926288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 1926289 . C . PASS END=1926293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1926294 . T . PASS END=1926294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:26,0 chr2 1926295 . T . PASS END=1926295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 1926296 . C . PASS END=1926307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 1926308 . A . PASS END=1926318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr2 1926319 . G . PASS END=1926399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,817:0,61,255:26,0 chr2 1926400 . T . PASS END=1926421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:26:0,63,945:0,67,255:26,0 chr2 1926422 . G . PASS END=1926436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr2 1926437 . G T, 133.36 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,11,0:0,18,0:83:171,86,0,1050,86,1050:255,87,0:0,0:1.3336e+02,8.3359e+01,0.0000e+00,4.5000e+02,1.1813e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,13:0,0,20,9 chr2 1926438 . G . PASS END=1926474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:33,0 chr2 1926475 . T . PASS END=1927035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:33:0,85,1008:0,85,255:40,0 chr2 1946754 . C . PASS END=1946757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 1946758 . T . PASS END=1946759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 1946760 . C . PASS END=1946760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 1946761 . T . PASS END=1946769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 1946770 . T . LowGQ END=1946774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:25:0,0,692:2,0,255:27,4 chr2 1946775 . C . PASS END=1946775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 1946776 . C . PASS END=1946776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 1946777 . T . PASS END=1946876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:30:0,83,1141:0,83,255:40,0 chr2 1946877 . C . PASS END=1946881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,102,1530:0,123,255:39,0 chr2 1946882 . T . PASS END=1946882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:17:43:0,17,1101:0,17,255:31,0 chr2 1946883 . C . PASS END=1946887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:82:44:0,82,1455:0,82,255:38,0 chr2 1946888 . T . PASS END=1946888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:27:46:0,27,1380:0,27,255:34,0 chr2 1946889 . C . PASS END=1946891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:43:0,81,1356:0,81,255:38,0 chr2 1946892 . C . PASS END=1946892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1458:0,74,255:38,0 chr2 1946893 . C . PASS END=1946895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1377:0,96,255:39,0 chr2 1946896 . G . PASS END=1946896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1380:0,66,255:36,0 chr2 1946897 . T . PASS END=1946897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:46:44:0,46,1435:0,46,255:37,0 chr2 1946898 . C . PASS END=1946899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:42:0,115,1537:0,115,255:39,0 chr2 1946900 . T . PASS END=1946900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1291:0,67,255:36,0 chr2 1946901 . C . PASS END=1946902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:41:0,92,1415:0,92,255:36,0 chr2 1946903 . T . PASS END=1946903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:5:44:0,5,1310:0,5,255:36,0 chr2 1946904 . C . PASS END=1946907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1544:0,116,255:39,0 chr2 1946908 . T . PASS END=1946910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1360:0,44,255:38,0 chr2 1946911 . C . PASS END=1946911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:44:0,82,1338:0,82,255:37,0 chr2 1946912 . T . PASS END=1946912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1388:0,65,255:35,0 chr2 1946913 . C . PASS END=1946913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:36,0 chr2 1946914 . A G, 49.63 PASS DP=40;MQ=248.26;MQRankSum=4.719;ReadPosRankSum=1.085;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,18,0:0.462,0.000:39:8,10,0:13,8,0:48:84,0,50,636,706,1342:255,0,255:18,0:4.9631e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,9,9:12,9,9,9 chr2 1946915 . T . PASS END=1946915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1371:0,79,255:38,0 chr2 1946916 . C . PASS END=1946917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,115,1501:0,115,255:39,0 chr2 1946918 . T . PASS END=1946918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1431:0,76,255:37,0 chr2 1946919 . T . PASS END=1946951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:85:45:0,85,1464:0,85,255:40,0 chr2 1946952 . C . PASS END=1947106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:96:40:0,96,1440:0,103,255:40,0 chr2 1947111 . T . PASS END=1947111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 1976448 . T . PASS END=1976448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 1976449 . T . PASS END=1976454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 1976455 . C . PASS END=1976466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,992:0,68,255:26,0 chr2 1978514 . T . PASS END=1978523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,120,1800:0,123,255:40,0 chr2 1982937 . C . PASS END=1982961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,147,255:40,0 chr2 1982962 . T . PASS END=1982999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,126,255:40,0 chr2 1983293 . C . PASS END=1983326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:68:0,120,1800:0,187,255:40,0 chr2 1983495 . C . PASS END=1983549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:35:0,93,1365:0,93,255:40,0 chr2 2272820 . T . PASS END=2272820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 3193105 . T . PASS END=3193129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:19,0 chr2 3193130 . G . PASS END=3193155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 3193156 . C . PASS END=3193156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 3193157 . C . PASS END=3193190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 3193191 . G . PASS END=3193191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 3193192 . G . PASS END=3193244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,66,255:25,0 chr2 3193245 . T . PASS END=3193245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 3193246 . G . PASS END=3193248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 3193249 . G . PASS END=3193249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 3193250 . A . PASS END=3193255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 3193256 . T . PASS END=3193267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:17,0 chr2 3193268 . G . PASS END=3193279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 3196185 . T . PASS END=3196339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1215:0,87,255:40,0 chr2 3196340 . G . PASS END=3196340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 3196341 . A . PASS END=3196352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:20:0,45,675:0,60,255:18,0 chr2 3197770 . C . PASS END=3197777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 3197778 . G . PASS END=3197784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:26,0 chr2 3197785 . T . PASS END=3197791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr2 3197792 . T . PASS END=3197792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 3197793 . C . PASS END=3197793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 3197794 . T . PASS END=3197794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 3197795 . T . PASS END=3197799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr2 3197800 . G . PASS END=3197800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 3197801 . G . PASS END=3197802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr2 3197803 . T . PASS END=3197803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 3197804 . C . PASS END=3197917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1205:0,83,255:36,0 chr2 3197918 . T . PASS END=3197937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,68,255:26,0 chr2 3200652 . C . PASS END=3200656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:26,0 chr2 3200657 . G . PASS END=3200659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 3200660 . C . PASS END=3200660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr2 3200661 . C . PASS END=3200761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1058:0,90,255:38,0 chr2 3200762 . C . PASS END=3200777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr2 3200778 . G . PASS END=3200788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr2 3212300 . C . PASS END=3212666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:33:0,80,1136:0,80,255:40,0 chr2 3212667 . C . PASS END=3212680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1305:0,102,255:34,0 chr2 3212681 . A . PASS END=3212681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:27,0 chr2 3212682 . C . PASS END=3212685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr2 3212686 . C . PASS END=3212702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:26,0 chr2 3212703 . C . PASS END=3212703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 3212704 . C A, 46.08 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=2.010;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,9,0:0.360,0.000:25:9,2,0:7,7,0:45:81,0,50,322,504,826:255,0,255:16,0:4.6080e+01,1.2891e-04,5.3000e+01,3.2187e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,1,8:5,11,6,3 chr2 3212705 . T . PASS END=3212727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,66,255:23,0 chr2 3212728 . T . PASS END=3212728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 3217920 . C . PASS END=3217945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:55:0,120,1800:0,139,255:40,0 chr2 3217946 . A . PASS END=3218019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,144,255:40,0 chr2 3261070 . C . PASS END=3261076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr2 3261077 . T . PASS END=3261078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr2 3261079 . T . PASS END=3261079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 3261080 . T . PASS END=3261226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:29:0,86,1094:0,86,255:40,0 chr2 3278110 . A . PASS END=3278190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,162,255:40,0 chr2 3322628 . C . PASS END=3322632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 3322633 . A . PASS END=3322633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 3322634 . C . PASS END=3322689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:31:0,85,1127:0,85,255:40,0 chr2 3322690 . T . PASS END=3322690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1299:0,79,255:39,0 chr2 3322691 . G . PASS END=3322729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:88:33:0,88,1181:0,88,255:40,0 chr2 3341788 . T . PASS END=3341790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:23,0 chr2 3341791 . T . PASS END=3341791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 3341792 . G . PASS END=3341792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr2 3341793 . T . PASS END=3341793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 3341794 . T . PASS END=3341794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 3341795 . G . PASS END=3341795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 3341796 . T . PASS END=3341813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,848:0,62,255:26,0 chr2 3341814 . C . PASS END=3341920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:30:0,90,1111:0,90,255:40,0 chr2 3356977 . C . PASS END=3356990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,848:0,72,255:24,0 chr2 3356991 . A . PASS END=3356997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:25,0 chr2 3356998 . G . PASS END=3357068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1080:0,87,255:38,0 chr2 3357069 . T . PASS END=3357090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:62:24:0,62,990:0,62,255:26,0 chr2 3357091 . T . PASS END=3357091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 3357092 . A . PASS END=3357094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 3358321 . C . PASS END=3358404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,119,1659:0,119,255:40,0 chr2 3360398 . G . PASS END=3360475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,120,1800:0,123,255:40,0 chr2 3381419 . C . PASS END=3381460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1386:0,98,255:40,0 chr2 3391395 . A . PASS END=3391405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:17,0 chr2 3391406 . T . PASS END=3391406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 3391407 . G . PASS END=3391429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr2 3391430 . C . PASS END=3391431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr2 3391432 . C . PASS END=3391437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:20,0 chr2 3391438 . C . PASS END=3391439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 3391440 . C . PASS END=3391440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 3391441 . C . PASS END=3391442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 3391443 . C . PASS END=3391443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 3391444 . A . PASS END=3391447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:24,0 chr2 3391448 . C . PASS END=3391448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 3391449 . C . PASS END=3391473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr2 3391474 . A . PASS END=3391474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 3391475 . G . PASS END=3391499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,908:0,72,255:24,0 chr2 3391500 . A . PASS END=3391500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 3391501 . T . PASS END=3391503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 3391504 . A . PASS END=3391504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 3391505 . T . PASS END=3391515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 3391516 . A . PASS END=3391516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 3391517 . T . PASS END=3391520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:24,0 chr2 3391521 . T . PASS END=3391521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr2 3391522 . T . PASS END=3391524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,817:0,72,255:24,0 chr2 3391525 . G . PASS END=3391527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 3391528 . C . PASS END=3391529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 3391530 . G . PASS END=3391530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 3391531 . A . PASS END=3391539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 3391540 . A . PASS END=3391540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 3391541 . G . PASS END=3391541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr2 3391542 . A . PASS END=3391552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 3391553 . A . PASS END=3391553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr2 3391554 . G . PASS END=3391574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,886:0,61,255:24,0 chr2 3391575 . A . PASS END=3391575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 3391576 . A . PASS END=3391581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 3391582 . A . PASS END=3391634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:19,0 chr2 3391635 . G . PASS END=3391635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:18,0 chr2 3391636 . A . PASS END=3391643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,607:0,40,255:19,0 chr2 3391644 . G . PASS END=3391646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 3391647 . C . PASS END=3391648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 3391649 . G . PASS END=3391649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:19,0 chr2 3391650 . G . PASS END=3391652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 3391653 . C . PASS END=3391686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,47,255:19,0 chr2 3391687 . G . PASS END=3391699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:13,0 chr2 3391700 . G . PASS END=3391700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:11,0 chr2 3391701 . G . PASS END=3391713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 3391714 . C . PASS END=3391731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr2 3391732 . A . PASS END=3391736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 3391737 . G . PASS END=3391738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 3391739 . C . PASS END=3391756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr2 3391757 . G . PASS END=3391757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 3391758 . G . PASS END=3391763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 3391764 . G . PASS END=3391766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 3391767 . C . PASS END=3391768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 3391769 . C . PASS END=3391771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 3391772 . T . PASS END=3391772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 3391773 . A . PASS END=3391777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr2 3391778 . A . PASS END=3391778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 3391779 . G . PASS END=3391789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 3391790 . G . PASS END=3391844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:24,0 chr2 3391845 . C . PASS END=3391845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 3391846 . C . PASS END=3391859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 3391860 . C . PASS END=3391860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 3391861 . C . PASS END=3391866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:24,0 chr2 3391867 . C . PASS END=3391867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 3391868 . G . PASS END=3391876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 3391877 . C . PASS END=3391877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 3391878 . A . PASS END=3391896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr2 3391897 . C . PASS END=3391897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 3391898 . C . PASS END=3391898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr2 3391899 . C . PASS END=3391899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 3391900 . C . PASS END=3391935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr2 3391936 . A . PASS END=3391936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 3391937 . G . PASS END=3391958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,941:0,65,255:26,0 chr2 3391959 . A . PASS END=3391967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:29,0 chr2 3391968 . T . PASS END=3391978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 3391979 . A . PASS END=3391979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,921:0,29,255:25,0 chr2 3391980 . C . PASS END=3391982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr2 3391983 . C . PASS END=3391984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 3391985 . C . PASS END=3392001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1014:0,68,255:26,0 chr2 3392002 . G . PASS END=3392003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 3392004 . C . PASS END=3392008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 3392009 . C . PASS END=3392018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 3392019 . T . PASS END=3392019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 3392020 . T . PASS END=3392030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 3392031 . A . PASS END=3392031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:28,0 chr2 3392032 . C . PASS END=3392037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 3392038 . C . PASS END=3392064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,959:0,81,255:31,0 chr2 3392065 . T . PASS END=3392065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:29,0 chr2 3392066 . C . PASS END=3392067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 3392068 . A . PASS END=3392068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:27,0 chr2 3392069 . C . PASS END=3392074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1141:0,82,255:30,0 chr2 3392075 . T C, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.697;ReadPosRankSum=2.077;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,21,0:0.636,0.000:33:4,11,0:8,10,0:45:85,0,44,751,400,1151:255,0,255:12,0:5.0000e+01,1.2451e-04,4.7283e+01,4.5000e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,10,11:4,8,14,7 chr2 3392076 . A . PASS END=3392081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:30,0 chr2 3392082 . T . PASS END=3392082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr2 3392083 . C . PASS END=3392099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1041:0,87,255:30,0 chr2 3392100 . A . PASS END=3392100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 3392101 . G . PASS END=3392103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 3392104 . A . PASS END=3392104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 3392105 . T . PASS END=3392112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 3392113 . C . PASS END=3392114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1062:0,77,255:26,0 chr2 3392115 . G . PASS END=3392116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 3392117 . C . PASS END=3392117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 3392118 . T . PASS END=3392119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 3392120 . C . PASS END=3392135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:24,0 chr2 3392136 . C . PASS END=3392138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 3392139 . C . PASS END=3392139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 3392140 . C . PASS END=3392146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:24:0,57,855:0,59,255:19,0 chr2 3392147 . C . PASS END=3392148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 3392149 . C . PASS END=3392161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,656:0,47,255:19,0 chr2 3392162 . C . PASS END=3392162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:17,0 chr2 3392163 . G . PASS END=3392174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:19,0 chr2 3392175 . G . PASS END=3392175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,537:0,10,255:15,0 chr2 3392176 . A . PASS END=3392180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr2 3392181 . G . PASS END=3392181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,543:0,7,255:15,0 chr2 3392182 . T . PASS END=3392184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 3392185 . C . PASS END=3392185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 3392186 . C . PASS END=3392189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 3392190 . C . PASS END=3392191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 3392192 . A . PASS END=3392192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:15,0 chr2 3392193 . G . PASS END=3392194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,558:0,34,255:14,0 chr2 3392195 . G . PASS END=3392200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:16,0 chr2 3392201 . G . PASS END=3392201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:13,0 chr2 3392202 . G . PASS END=3392202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:12,0 chr2 3392203 . C . PASS END=3392204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:32:16:0,32,557:0,32,255:13,0 chr2 3392205 . G . PASS END=3392205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:13,0 chr2 3392206 . C . PASS END=3392207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,635:0,40,255:15,0 chr2 3392208 . G . PASS END=3392208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:15,0 chr2 3392209 . C . PASS END=3392215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,659:0,41,255:16,0 chr2 3392216 . G . PASS END=3392217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr2 3392218 . C . PASS END=3392218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 3392219 . G . PASS END=3392219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 3392220 . T . PASS END=3392220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:14,0 chr2 3392221 . C . PASS END=3392221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 3392222 . G . PASS END=3392222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 3392223 . C . PASS END=3392224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 3392225 . A . PASS END=3392225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 3392226 . G . PASS END=3392226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 3392227 . A . PASS END=3392234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr2 3392235 . G . PASS END=3392235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr2 3392236 . C . PASS END=3392236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 3392237 . G . PASS END=3392237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 3392238 . C . PASS END=3392238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 3392239 . A . PASS END=3392239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr2 3392240 . C . PASS END=3392240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 3392241 . A . PASS END=3392242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,557:0,32,255:16,0 chr2 3392243 . C . PASS END=3392244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 3392245 . A . PASS END=3392245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 3392246 . G . PASS END=3392246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr2 3392247 . G . PASS END=3392247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr2 3392248 . C . PASS END=3392252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 3392253 . T . PASS END=3392253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,499:0,37,255:16,0 chr2 3392254 . T . PASS END=3392259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 3392260 . G . PASS END=3392260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 3392261 . G . PASS END=3392286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,698:0,44,255:19,0 chr2 3392287 . T . PASS END=3392287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr2 3392288 . G . PASS END=3392293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr2 3392294 . G . PASS END=3392294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:18,0 chr2 3392295 . A . PASS END=3392298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr2 3392299 . A . PASS END=3392300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 3392301 . A . PASS END=3392301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 3392302 . T . PASS END=3392330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 3392331 . G . PASS END=3392338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 3392339 . T . PASS END=3392340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 3392341 . C . PASS END=3392341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr2 3392342 . G . PASS END=3392351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:26,0 chr2 3392352 . C . PASS END=3392368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 3392369 . C . PASS END=3392369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 3392370 . C . PASS END=3392379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 3392380 . G . PASS END=3392380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr2 3392381 . C . PASS END=3392382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 3392383 . C . PASS END=3392441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 3393685 . A . PASS END=3393786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,1:123:99:105:0,120,1800:0,255,255:40,0 chr2 3405548 . G . PASS END=3405664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,114,1537:0,115,255:40,0 chr2 3425471 . C . PASS END=3425476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:15,0 chr2 3425652 . A . PASS END=3425652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 3425653 . G . PASS END=3425742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,989:0,84,255:34,0 chr2 3425743 . G . PASS END=3425752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 3425753 . A . PASS END=3425753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:21,0 chr2 3425754 . G . PASS END=3425757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:21,0 chr2 3425758 . C . PASS END=3425759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 3425760 . C . PASS END=3425765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:21,0 chr2 3428296 . C . PASS END=3428297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,111,1665:0,114,255:38,0 chr2 3428298 . C . PASS END=3428298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1365:0,70,255:37,0 chr2 3428299 . T . PASS END=3428429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:32:0,80,1169:0,80,255:40,0 chr2 3428430 . C . PASS END=3428431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,76,255:25,0 chr2 3428432 . G . PASS END=3428434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:29:0,57,855:0,87,255:19,0 chr2 3447550 . G . PASS END=3447638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1045:0,89,255:39,0 chr2 3447639 . A . PASS END=3447662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr2 3456732 . G . PASS END=3456755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,200,255:40,0 chr2 3460718 . A . PASS END=3460801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:43:0,113,1543:0,113,255:40,0 chr2 3461392 . A . PASS END=3461394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr2 3461395 . C . PASS END=3461402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr2 3461403 . T . PASS END=3461403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 3461404 . T . PASS END=3461464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:28:0,84,1025:0,84,255:39,0 chr2 3464034 . C . PASS END=3464107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:36:0,91,1191:0,91,255:40,0 chr2 3464415 . A . PASS END=3464474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,102,1646:0,102,255:40,0 chr2 3466629 . C . PASS END=3466634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr2 3466635 . A . PASS END=3466657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,762:0,63,255:24,0 chr2 3466658 . T . PASS END=3466658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 3466659 . G . PASS END=3466748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,848:0,64,255:25,0 chr2 3466749 . G . PASS END=3466760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr2 3469368 . G . PASS END=3469466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:40:0,88,1350:0,88,255:40,0 chr2 3469467 . G . PASS END=3469467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1274:0,62,255:30,1 chr2 3469468 . T . PASS END=3469468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:49:38:0,49,1231:0,49,255:30,1 chr2 3469469 . A . PASS END=3469477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1272:0,84,255:35,0 chr2 3469478 . C . PASS END=3469479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 3470025 . G . PASS END=3470034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,861:0,69,255:26,0 chr2 3470035 . G . PASS END=3470045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr2 3470046 . G . PASS END=3470046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 3470047 . C . PASS END=3470075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1064:0,87,255:40,0 chr2 3470076 . C . PASS END=3470114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,99,1563:0,99,255:40,0 chr2 3470115 . T C, 49.34 PASS DP=46;MQ=249.14;MQRankSum=5.778;ReadPosRankSum=2.338;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,21,0:0.457,0.000:46:10,10,0:15,11,0:48:84,0,50,743,894,1637:255,0,255:21,0:4.9339e+01,7.2222e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,14,7:15,10,13,8:3470115 chr2 3470116 . G . PASS END=3470123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,122,255:39,0 chr2 3470124 . G A, 49.20 PASS DP=44;MQ=249.11;MQRankSum=5.645;ReadPosRankSum=1.638;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:24,20,0:0.455,0.000:44:9,10,0:15,10,0:48:84,0,50,684,856,1540:255,0,255:20,0:4.9204e+01,7.4034e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,8,8,12:9,15,12,8:3470115 chr2 3470125 . G . PASS END=3470138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:40:0,85,1302:0,85,255:39,0 chr2 3470139 . A . PASS END=3470139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1371:0,62,255:33,0 chr2 3470140 . G . PASS END=3470165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,101,255:35,0 chr2 3470166 . T . PASS END=3470168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr2 3481463 . C . PASS END=3481566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:43:0,108,1620:0,123,255:40,0 chr2 3482617 . C . PASS END=3482704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:40:0,90,1350:0,96,255:40,0 chr2 3482708 . A . PASS END=3482708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr2 3482990 . G . PASS END=3482995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 3482996 . A . PASS END=3482996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr2 3482997 . A . PASS END=3483004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr2 3483005 . G . PASS END=3483006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 3483007 . C . PASS END=3483015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr2 3483016 . G . PASS END=3483016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 3483017 . C . PASS END=3483023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 3483024 . T . PASS END=3483024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 3483025 . G . PASS END=3483043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr2 3483044 . C . PASS END=3483052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 3483053 . C . PASS END=3483058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 3483059 . G . PASS END=3483084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr2 3483085 . C . PASS END=3483096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr2 3483097 . G . PASS END=3483098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 3483099 . G . PASS END=3483119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,737:0,47,255:19,0 chr2 3483120 . C . PASS END=3483121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 3483122 . A . PASS END=3483167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,670:0,54,255:19,0 chr2 3483168 . T . PASS END=3483188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 3483189 . A . PASS END=3483204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,495:0,32,255:13,0 chr2 3483205 . C T, 48.48 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=0.696;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,5,0:0.385,0.000:13:3,0,0:5,5,0:47:83,0,50,179,286,465:155,0,255:7,0:4.8483e+01,8.3354e-05,5.3000e+01,1.7882e+02,3.2089e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,2,3:4,4,3,2 chr2 3483206 . A . PASS END=3483208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 3483209 . A . PASS END=3483209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 3483210 . C . PASS END=3483232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 3488491 . C . PASS END=3488501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:23,0 chr2 3488502 . A G, 45.30 PASS DP=23;MQ=250.00;MQRankSum=3.841;ReadPosRankSum=2.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:8,3,0:7,5,0:45:80,0,50,286,521,807:241,0,255:15,0:4.5303e+01,1.4988e-04,5.3000e+01,2.8616e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,6,2:7,8,3,5 chr2 3488503 . G . PASS END=3488515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:25,0 chr2 3488516 . C . PASS END=3488516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 3488517 . A . PASS END=3488527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 3488528 . C . PASS END=3488528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 3488529 . A . PASS END=3488531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 3488532 . G . PASS END=3488532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 3488533 . C . PASS END=3488539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr2 3488540 . A . PASS END=3488540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr2 3488541 . C . PASS END=3488558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 3488559 . G . PASS END=3488561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 3488562 . T . PASS END=3488562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:26,0 chr2 3488563 . C . PASS END=3488576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1094:0,90,255:31,0 chr2 3488577 . A . PASS END=3488605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr2 3488606 . C . PASS END=3488635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 3488636 . G . PASS END=3488647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 3488648 . G . PASS END=3488649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 3502734 . C . PASS END=3502741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr2 3502742 . T . PASS END=3502746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 3502747 . G . PASS END=3502748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 3502749 . C . PASS END=3502749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr2 3502750 . A . PASS END=3502751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 3502752 . A . PASS END=3502754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 3502755 . T . PASS END=3502759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 3502760 . C . PASS END=3502760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 3502761 . G . PASS END=3502762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 3502763 . A . PASS END=3502764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,735:0,50,255:22,0 chr2 3502765 . T . PASS END=3502800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,728:0,69,255:26,0 chr2 3502801 . T . PASS END=3502801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr2 3502802 . A . PASS END=3502836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,939:0,69,255:26,0 chr2 3502837 . A . PASS END=3502847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,693:0,49,255:19,0 chr2 3502848 . G . PASS END=3502848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 3502849 . T . PASS END=3502853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 3504356 . C T, 50.00 PASS DP=9;MQ=247.25;MQRankSum=1.422;ReadPosRankSum=1.001;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,6,0:0.667,0.000:9:2,2,0:1,4,0:47:85,0,48,215,107,322:206,0,89:2,0:5.0000e+01,7.9730e-05,5.0786e+01,2.1470e+02,1.4206e+02,3.2499e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,4,2:2,1,2,4 chr2 3504357 . T . PASS END=3504376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 3504377 . A . PASS END=3504377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 3504378 . G . PASS END=3504381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 3504382 . C . PASS END=3504383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 3504384 . A . PASS END=3504384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 3504385 . C . PASS END=3504387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 3504388 . A . PASS END=3504388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 3504389 . G . PASS END=3504393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 3504394 . C . PASS END=3504415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 3504416 . T . PASS END=3504426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 3504427 . C . PASS END=3504473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr2 3504474 . G . PASS END=3504483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 3504484 . C . PASS END=3504506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr2 3504507 . G . PASS END=3504550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,47,255:19,0 chr2 3504551 . G . PASS END=3504553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 3504554 . C . PASS END=3504563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 3504564 . G . PASS END=3504605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,679:0,63,255:26,0 chr2 3504606 . G . PASS END=3504608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 3504609 . A . PASS END=3504609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr2 3504610 . T . PASS END=3504613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 3504614 . T . PASS END=3504615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 3504616 . C . PASS END=3504622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr2 3504623 . G . PASS END=3504623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 3504624 . G . PASS END=3504649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:33:0,94,1221:0,94,255:37,0 chr2 3504650 . T . PASS END=3504686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1350:0,95,255:40,0 chr2 3504687 . A G, 48.83 PASS DP=43;MQ=249.41;MQRankSum=4.977;ReadPosRankSum=1.993;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,19,0:0.442,0.000:43:11,11,0:13,8,0:47:84,0,50,680,842,1522:255,0,255:23,0:4.8828e+01,7.8694e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,6,13:12,12,4,15 chr2 3504688 . T . PASS END=3504724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,105,1575:0,116,255:40,0 chr2 3504725 . C . PASS END=3504745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1258:0,84,255:36,0 chr2 3504746 . C . PASS END=3504746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:28,0 chr2 3504747 . C . PASS END=3504755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1170:0,83,255:30,0 chr2 3504756 . C . PASS END=3504764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:24,0 chr2 3517628 . C . PASS END=3517747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,127,255:40,0 chr2 3518579 . T . PASS END=3518680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,145,255:40,0 chr2 3523139 . C . PASS END=3523165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,574:0,45,255:19,0 chr2 3523166 . C . PASS END=3523172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 3523173 . T . PASS END=3523173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 3523174 . C . PASS END=3523179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr2 3523180 . C . PASS END=3523180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 3523181 . C . PASS END=3523186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr2 3523187 . G . PASS END=3523187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 3523188 . C . PASS END=3523191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 3523192 . C . PASS END=3523192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 3523193 . G . PASS END=3523197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,856:0,69,255:24,0 chr2 3523198 . C . PASS END=3523198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 3523199 . G . PASS END=3523234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,846:0,69,255:24,0 chr2 3523235 . G . PASS END=3523240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 3523241 . A . PASS END=3523242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:19,0 chr2 3523243 . A . PASS END=3523243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 3523244 . C . PASS END=3523253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:17,0 chr2 3523254 . A . PASS END=3523258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,37,255:13,0 chr2 3579890 . T . PASS END=3579900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,179,255:40,0 chr2 3593375 . T . PASS END=3593481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:42:0,114,1710:0,125,255:40,0 chr2 3595521 . C . PASS END=3595523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr2 3595524 . C . PASS END=3595645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1003:0,84,255:40,0 chr2 3596230 . C . PASS END=3596230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 3596231 . A . PASS END=3596232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 3596233 . T . PASS END=3596233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,904:0,48,255:25,0 chr2 3596234 . T . PASS END=3596234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr2 3596235 . A . PASS END=3596235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 3596236 . T . PASS END=3596236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 3596237 . C . PASS END=3596241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 3596242 . A . PASS END=3596242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,802:0,72,255:27,0 chr2 3596243 . C . PASS END=3596244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 3596245 . T . PASS END=3596245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr2 3596246 . A . PASS END=3596314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:30:0,84,1260:0,90,255:40,0 chr2 3596648 . A . PASS END=3596702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:66:0,120,1800:0,188,255:40,0 chr2 3597963 . A . PASS END=3597973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,712:0,44,255:19,0 chr2 3597974 . T C, 104.18 PASS DP=19;MQ=240.99;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,737,57,737:255,57,0:0,0:1.0418e+02,5.4185e+01,1.6567e-05,4.5000e+02,8.8955e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,9:0,0,9,10 chr2 3597975 . G . PASS END=3597986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 3597987 . A . PASS END=3597988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 3597989 . G . PASS END=3597989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 3597990 . C . PASS END=3597992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 3597993 . A . PASS END=3597995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:20:0,49,745:0,49,255:20,0 chr2 3597996 . C . PASS END=3597998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 3597999 . G . PASS END=3598009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,798:0,50,255:19,0 chr2 3598010 . T . PASS END=3598011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 3598012 . T . PASS END=3598017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 3598018 . C . PASS END=3598018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr2 3598019 . A . PASS END=3598020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 3598021 . T . PASS END=3598021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 3598022 . A . PASS END=3598038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 3598039 . C . PASS END=3598054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr2 3598055 . G . PASS END=3598055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 3598056 . A . PASS END=3598062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 3599734 . C . PASS END=3599737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 3599738 . G . PASS END=3599772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,313:0,30,255:13,0 chr2 3599773 . G . PASS END=3599774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 3599775 . T . PASS END=3599775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 3599776 . C . PASS END=3599846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,560:0,48,255:18,0 chr2 3599847 . A . PASS END=3599847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 3599848 . G . PASS END=3599856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 3599857 . T . PASS END=3599857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:16,0 chr2 3599858 . G . PASS END=3599860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:16,0 chr2 3599861 . T . PASS END=3599861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 3599862 . T . PASS END=3599863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 3599864 . C . PASS END=3599864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr2 3599865 . G . PASS END=3599865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 3599866 . C . PASS END=3599867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr2 3599868 . T . PASS END=3599871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 3599872 . A . PASS END=3599872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:12,0 chr2 3599873 . T . PASS END=3599874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 3599875 . C . PASS END=3599876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr2 3599877 . T . PASS END=3599877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 3599878 . G . PASS END=3599879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,527:0,31,255:15,0 chr2 3599880 . C . PASS END=3599881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr2 3599882 . A . PASS END=3599883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 3599884 . G . PASS END=3599884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 3599885 . T . PASS END=3599885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 3599886 . T . PASS END=3599886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 3599887 . G . PASS END=3599888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 3599889 . T . PASS END=3599889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 3599890 . T . PASS END=3599891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 3599892 . T . PASS END=3599893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 3599894 . A . PASS END=3599898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 3604379 . C . PASS END=3604391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr2 3604392 . C . PASS END=3604393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 3604394 . G . PASS END=3604415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:25,0 chr2 3604416 . G . PASS END=3604424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1041:0,80,255:30,0 chr2 3604425 . C . PASS END=3604425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr2 3604426 . T . PASS END=3604439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 3604440 . A . PASS END=3604440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 3604441 . A . PASS END=3604441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 3604442 . A . PASS END=3604442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:28,0 chr2 3604443 . C . PASS END=3604450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1085:0,90,255:30,0 chr2 3604451 . A . PASS END=3604451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr2 3604452 . T . PASS END=3604464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1117:0,90,255:30,0 chr2 3604465 . A . PASS END=3604482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,922:0,62,255:26,0 chr2 3604483 . C . PASS END=3604490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:24:0,51,765:0,72,255:19,0 chr2 3604491 . A . PASS END=3604494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,845:0,61,255:22,0 chr2 3605430 . T . PASS END=3605430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 3605431 . T . PASS END=3605433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:33,0 chr2 3605719 . T . PASS END=3605724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 3605725 . G . PASS END=3605850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:27:0,80,994:0,80,255:40,0 chr2 3622873 . C . PASS END=3622873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 3622915 . C . PASS END=3622915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 3622932 . C . PASS END=3622932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 3622936 . G . PASS END=3622936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 3622941 . G . PASS END=3622941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 3623187 . C . PASS END=3623187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 3623200 . A . PASS END=3623207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 3623208 . T . PASS END=3623209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr2 3623210 . C . PASS END=3623213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:28,0 chr2 3623214 . C . PASS END=3623214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 3623215 . G . PASS END=3623217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 3623218 . A . PASS END=3623219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1046:0,74,255:30,0 chr2 3623220 . G . PASS END=3623220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 3623221 . A . PASS END=3623221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:29,0 chr2 3623222 . T . PASS END=3623222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:31,0 chr2 3623223 . C . PASS END=3623223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 3623224 . G . PASS END=3623226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr2 3623227 . A . PASS END=3623228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr2 3623229 . G . PASS END=3623238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 3623239 . G . PASS END=3623239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 3623240 . A . PASS END=3623257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1058:0,90,255:31,0 chr2 3623258 . A . PASS END=3623258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 3623259 . G . PASS END=3623266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1172:0,93,255:31,0 chr2 3623267 . T . PASS END=3623268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:28,0 chr2 3623269 . T . PASS END=3623270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 3623271 . C . PASS END=3623271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 3623272 . C . PASS END=3623272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:27,0 chr2 3623273 . A . PASS END=3623273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:26,0 chr2 3623274 . G . PASS END=3623274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 3623406 . G . PASS END=3623479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1234:0,95,255:40,0 chr2 3623998 . G . PASS END=3623998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 3624077 . G . PASS END=3624088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:70:0,120,1800:0,199,255:40,0 chr2 3624089 . G . PASS END=3624220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,105,1575:0,135,255:40,2 chr2 3625300 . A . PASS END=3625364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:80:0,120,1800:0,228,255:40,0 chr2 3627700 . C . PASS END=3627907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:34:0,102,1191:0,102,255:40,0 chr2 3628392 . T . PASS END=3628392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 3628395 . G . PASS END=3628472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:41:0,81,1468:0,81,255:40,0 chr2 3651204 . G . PASS END=3651204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 3651236 . A . PASS END=3651251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,147,255:40,0 chr2 3651905 . G . PASS END=3651905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 3651906 . A . PASS END=3651906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 3651907 . G . PASS END=3651957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:25,0 chr2 3651958 . G . PASS END=3651967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 3651968 . G . PASS END=3651978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 3651979 . C . PASS END=3651983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 3651984 . A . PASS END=3652020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 3652021 . G . PASS END=3652028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:16,0 chr2 3652029 . C . PASS END=3652030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:24:0,36,540:0,72,255:12,0 chr2 3652031 . C . PASS END=3652037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 3652038 . G . PASS END=3652060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 3653782 . A . PASS END=3653828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:31:0,85,1305:0,85,255:40,0 chr2 3653829 . G . PASS END=3653829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 3653830 . C . PASS END=3653832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 3653833 . G . PASS END=3653833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 3660901 . G . PASS END=3660906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr2 3660907 . C . PASS END=3660913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 3660914 . G . PASS END=3660916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 3660917 . G . PASS END=3660928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr2 3660929 . C . PASS END=3660929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 3660930 . G . PASS END=3660934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 3660935 . C . PASS END=3660960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,629:0,40,255:19,0 chr2 3660961 . C . PASS END=3660961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 3660962 . G . PASS END=3660964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 3660965 . A . PASS END=3660972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,737:0,57,255:19,0 chr2 3673604 . C . PASS END=3673682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:49:0,114,1710:0,131,255:40,0 chr2 3685123 . G . PASS END=3685194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,153,255:40,0 chr2 3687868 . G . PASS END=3687921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:37:0,84,1325:0,84,255:40,0 chr2 3688830 . C . PASS END=3688852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,148,255:40,0 chr2 3691034 . G . PASS END=3691034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 3691035 . C . PASS END=3691035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 3691036 . C . PASS END=3691036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:23,0 chr2 3691037 . T . PASS END=3691042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,970:0,67,255:27,0 chr2 3691043 . G . PASS END=3691043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 3691044 . T . PASS END=3691044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 3691045 . G . PASS END=3691047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 3691048 . T . PASS END=3691049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,903:0,67,255:28,0 chr2 3691050 . C . PASS END=3691051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 3691052 . G . PASS END=3691052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 3691053 . C . PASS END=3691063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 3691064 . A . PASS END=3691065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 3691066 . G . PASS END=3691066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:26,0 chr2 3691067 . C . PASS END=3691067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 3691068 . C . PASS END=3691075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 3691076 . A . PASS END=3691076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr2 3691077 . G . PASS END=3691083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1095:0,90,255:31,0 chr2 3691084 . A . PASS END=3691084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:30,0 chr2 3691085 . A . PASS END=3691093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1089:0,93,255:31,0 chr2 3691094 . C . PASS END=3691094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 3691095 . T . PASS END=3691101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 3691102 . A . PASS END=3691102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 3691103 . C . PASS END=3691103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 3691104 . C . PASS END=3691116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:25,0 chr2 3691117 . T . PASS END=3691125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 3691126 . A . PASS END=3691126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr2 3691127 . A . PASS END=3691127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 3691128 . T . PASS END=3691129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 3691317 . C . PASS END=3691323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,623:0,41,255:19,0 chr2 3691324 . C . PASS END=3691345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,713:0,60,255:23,0 chr2 3691346 . A . PASS END=3691347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 3691348 . G . PASS END=3691349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 3691350 . T . PASS END=3691350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 3691351 . C . PASS END=3691372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,862:0,72,255:25,0 chr2 3691373 . A . PASS END=3691373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr2 3691374 . A . PASS END=3691414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:26,0 chr2 3691415 . G . PASS END=3691423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 3691424 . A . PASS END=3691424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 3691425 . G . PASS END=3691427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 3691428 . T . PASS END=3691429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 3691430 . C . PASS END=3691431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 3691432 . C . PASS END=3691432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 3691433 . A . PASS END=3691435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 3691436 . G . PASS END=3691436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 3691437 . A . PASS END=3691445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 3691446 . C . PASS END=3691446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 3691447 . C . PASS END=3691456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 3691457 . A . PASS END=3691459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 3691460 . G . PASS END=3691490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:30,0 chr2 3691491 . G . PASS END=3691502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:25,0 chr2 3691503 . G . PASS END=3691503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:22,0 chr2 3691504 . C . PASS END=3691510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:24,0 chr2 3691511 . G . PASS END=3691514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 3691515 . T . PASS END=3691515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 3691516 . G . PASS END=3691518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 3691519 . G . PASS END=3691519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr2 3691520 . A . PASS END=3691533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 3691534 . C . PASS END=3691547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 3691548 . A G, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=1.121;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,18,0:0.562,0.000:32:8,11,0:6,7,0:48:85,0,49,644,501,1144:255,0,255:13,0:5.0000e+01,7.1446e-05,5.1908e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,9,9:7,7,8,10 chr2 3691549 . C . PASS END=3691568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1177:0,80,255:32,0 chr2 3691569 . A . PASS END=3691569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1016:0,79,255:27,0 chr2 3691570 . C . PASS END=3691574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 3691575 . G . PASS END=3691575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 3691576 . G . PASS END=3691576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 3691577 . C . PASS END=3691577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 3691578 . G . PASS END=3691585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 3691586 . G . PASS END=3691587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 3691588 . G . PASS END=3691602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr2 3691603 . C . PASS END=3691606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 3691607 . G . PASS END=3691624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 3691625 . A . PASS END=3691625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 3691626 . T . PASS END=3691661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1172:0,80,255:33,0 chr2 3691662 . A . PASS END=3691678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,60,255:27,0 chr2 3691679 . A . PASS END=3691684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:22:0,52,784:0,52,255:19,0 chr2 3691685 . G . PASS END=3691688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 3691689 . T . PASS END=3691689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 3691690 . T . PASS END=3691690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 3691691 . G . PASS END=3691691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 3691692 . A . PASS END=3691695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 3691696 . G . PASS END=3691701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 3691702 . C . PASS END=3691706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 3691707 . G . PASS END=3691708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 3694154 . A . PASS END=3694165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,800:0,66,255:26,0 chr2 3694166 . C G, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=2.978;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,16,0:0.615,0.000:26:5,7,0:5,9,0:47:85,0,47,542,329,871:255,0,255:10,0:5.0000e+01,8.8013e-05,4.9877e+01,4.5000e+02,3.6355e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,10,6:6,4,7,9 chr2 3694167 . C . PASS END=3694175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,931:0,78,255:26,0 chr2 3694176 . A . PASS END=3694189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 3694190 . A . PASS END=3694190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,865:0,67,255:27,0 chr2 3694191 . A . PASS END=3694203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr2 3694204 . G . PASS END=3694224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1185:0,80,255:31,0 chr2 3694225 . C . PASS END=3694225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 3694226 . C . PASS END=3694226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 3694227 . C . PASS END=3694230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 3694231 . A . PASS END=3694231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 3694232 . G . PASS END=3694233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 3694234 . G . PASS END=3694258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 3694259 . G . PASS END=3694263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr2 3694264 . C G, 50.00 PASS DP=23;MQ=247.27;MQRankSum=3.370;ReadPosRankSum=-0.598;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:9,14,0:0.609,0.000:23:4,7,0:5,7,0:47:85,0,48,471,306,777:255,0,250:9,0:5.0000e+01,7.9730e-05,5.0777e+01,4.5000e+02,3.4057e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,4,10:5,4,5,9:3694264 chr2 3694265 . T . PASS END=3694271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:16,0 chr2 3694272 . A G, 50.00 PASS DP=21;MQ=247.01;MQRankSum=3.134;ReadPosRankSum=0.458;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,11,0:0.524,0.000:21:4,6,0:6,5,0:48:85,0,50,372,356,728:255,0,255:10,0:5.0000e+01,6.5751e-05,5.2898e+01,3.7174e+02,3.9098e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,9,4,7:5,5,5,6:3694264 chr2 3694273 . T . PASS END=3694282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 3694283 . A . PASS END=3694283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 3694284 . G . PASS END=3694292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 3694293 . C . PASS END=3694295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 3718686 . G . PASS END=3718691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,165,255:40,0 chr2 3718692 . C T, 49.80 PASS DP=61;MQ=250.00;MQRankSum=6.694;ReadPosRankSum=2.159;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,29,0:0.475,0.000:61:13,18,0:19,11,0:48:85,0,50,1037,1144,2181:255,0,255:31,0:4.9795e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,13,20,9:22,10,19,10 chr2 3718693 . G . PASS END=3718729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,172,255:40,0 chr2 3718730 . C . PASS END=3718780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,187,255:40,0 chr2 3721665 . A . PASS END=3721715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:96:0,120,1800:0,208,255:40,0 chr2 3726058 . A . PASS END=3726125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,101,1710:0,101,255:40,0 chr2 3726126 . C . PASS END=3726145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,149,255:40,0 chr2 3727459 . G . PASS END=3727460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 3727461 . C . PASS END=3727461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:25,0 chr2 3727462 . A . PASS END=3727462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 3727463 . C . PASS END=3727466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 3727467 . T . PASS END=3727467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 3727468 . G . PASS END=3727482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:30:0,89,1028:0,89,255:35,0 chr2 3727483 . T . PASS END=3727483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:34,0 chr2 3727484 . G . PASS END=3727530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:36,0 chr2 3727531 . T . PASS END=3727531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:29,0 chr2 3727532 . C . PASS END=3727543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1170:0,83,255:29,0 chr2 3727544 . C . PASS END=3727556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,1016:0,60,255:26,0 chr2 3727557 . T . PASS END=3727557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 3727558 . C . PASS END=3727561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 3727562 . T . PASS END=3727562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 3727563 . C . PASS END=3727568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:23,0 chr2 3727569 . G . PASS END=3727569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 3727570 . C . PASS END=3727573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 3727574 . C . PASS END=3727584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:22:0,41,753:0,41,255:20,0 chr2 3729224 . A . PASS END=3729253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,106,1731:0,106,255:40,0 chr2 3729254 . C T, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.177;ReadPosRankSum=3.669;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,26,0:0.500,0.000:52:10,14,0:16,12,0:48:85,0,50,913,901,1815:255,0,255:25,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,12,14:15,11,12,14 chr2 3729255 . C . PASS END=3729291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,121,255:40,0 chr2 3729292 . G . PASS END=3729303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,108,1620:0,135,255:40,0 chr2 3730532 . C . PASS END=3730664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:88:34:0,88,1211:0,88,255:40,0 chr2 3731432 . A . PASS END=3731477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:77:0,120,1800:0,204,255:40,0 chr2 3743307 . A . PASS END=3743462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:32:0,87,1226:0,92,255:40,0 chr2 3743865 . G . PASS END=3743930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1217:0,89,255:40,0 chr2 3743931 . T . PASS END=3743931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1168:0,72,255:27,0 chr2 3743932 . A . PASS END=3743938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1202:0,86,255:29,0 chr2 3744938 . A . PASS END=3745046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,118,1800:0,118,255:40,0 chr2 3749102 . G . PASS END=3749104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:30:24:0,30,450:0,72,255:11,0 chr2 3749105 . A . PASS END=3749118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:27:24:0,27,405:0,72,255:9,0 chr2 3749119 . T . PASS END=3749122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:12:32:0,12,180:0,96,255:6,0 chr2 3749123 . A . LowGQ END=3749150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:41,0:41:0:34:0,0,0:0,102,255:3,0 chr2 3749151 . GGAA G, 182.46 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,26,0:0,19,0:132:214,135,0,2016,135,2016:255,132,0:0,71:1.8246e+02,1.3246e+02,0.0000e+00,4.5000e+02,1.6723e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,23,22:0,0,22,23 chr2 3749152 . G . LowGQ END=3749155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,71:71:0:45:0,0,0:255,97,0:40,71 chr2 3749156 . A . PASS END=3749201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:42:0,95,1476:0,95,255:40,0 chr2 3749202 . G . PASS END=3749224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1260:0,105,255:40,0 chr2 3749225 . A . PASS END=3749226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 3749953 . T . PASS END=3749975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,739:0,63,255:26,0 chr2 3749976 . G . PASS END=3749977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 3749978 . T . PASS END=3749978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:28,0 chr2 3749979 . C . PASS END=3749982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 3749983 . A . PASS END=3749983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:28,0 chr2 3749984 . G . PASS END=3750018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1115:0,83,255:32,0 chr2 3750019 . G . PASS END=3750023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,83,255:26,0 chr2 3750024 . G . PASS END=3750031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 3750032 . T . PASS END=3750047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,963:0,68,255:26,0 chr2 3750048 . A . PASS END=3750048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 3750049 . G . PASS END=3750090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:26,0 chr2 3750091 . C . PASS END=3750091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 3750092 . T . PASS END=3750094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 3750095 . T . PASS END=3750104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,56,255:19,0 chr2 3750105 . G . PASS END=3750106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 3750107 . A . PASS END=3750107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr2 3750108 . G . PASS END=3750109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr2 3750110 . A . PASS END=3750110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 3750111 . G . PASS END=3750112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 3750113 . C . PASS END=3750117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 3750118 . T . PASS END=3750118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:15,0 chr2 3750119 . T . PASS END=3750138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,623:0,54,255:18,0 chr2 3750139 . A . PASS END=3750139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 3750140 . A . PASS END=3750141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 3750142 . G . PASS END=3750142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 3750143 . C . PASS END=3750153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 3751342 . A . LowGQ END=3751342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 3751343 . T . PASS END=3751352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 3751353 . C . LowGQ END=3751353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 3751354 . G . PASS END=3751367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:6,0 chr2 3751368 . G . PASS END=3751372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 3751373 . A . PASS END=3751373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr2 3751374 . C . PASS END=3751378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 3751379 . C . PASS END=3751379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 3751380 . G . PASS END=3751381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 3751382 . C . PASS END=3751382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 3751383 . C . PASS END=3751385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 3751386 . C . PASS END=3751386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 3751387 . A . PASS END=3751395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,242:0,24,242:9,0 chr2 3751396 . G . PASS END=3751398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr2 3751399 . G . PASS END=3751413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr2 3751414 . G . PASS END=3751414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 3751415 . A . PASS END=3751415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 3751416 . C . PASS END=3751416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 3751417 . C . PASS END=3751417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 3751418 . C . LowGQ END=3751419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:12,0 chr2 3751420 . T . PASS END=3751420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 3751421 . T . PASS END=3751421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 3751422 . C . PASS END=3751422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,371:0,6,255:11,0 chr2 3751423 . T . PASS END=3751424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 3751425 . C . LowGQ END=3751425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,327:8,0,255:11,0 chr2 3751426 . G . PASS END=3751426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 3751427 . T . PASS END=3751427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 3751428 . G . PASS END=3751429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 3751430 . G . PASS END=3751430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 3751431 . C . LowGQ END=3751434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,286:0,0,255:11,0 chr2 3751435 . A . PASS END=3751435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:11,0 chr2 3751436 . A . LowGQ END=3751436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,300:33,0,255:9,0 chr2 3751437 . G . PASS END=3751437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 3751438 . T . PASS END=3751439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 3751440 . C . LowGQ END=3751440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,302:19,0,255:10,0 chr2 3751441 . G . PASS END=3751443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr2 3751444 . C . PASS END=3751444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr2 3751445 . T . PASS END=3751446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 3751447 . T . LowGQ END=3751447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,277:14,0,255:9,0 chr2 3751448 . C . PASS END=3751451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr2 3751452 . G . PASS END=3751452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,327:0,6,255:11,0 chr2 3751453 . C . PASS END=3751453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 3751454 . G . LowGQ END=3751454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,327:8,0,255:11,0 chr2 3751455 . C . PASS END=3751456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 3751457 . G . PASS END=3751457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,347:0,6,255:9,0 chr2 3751458 . C . PASS END=3751462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 3751463 . C . PASS END=3751463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr2 3751464 . C . PASS END=3751467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 3751468 . T . PASS END=3751468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,329:0,22,255:12,0 chr2 3751469 . T . PASS END=3751473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 3751474 . G . PASS END=3751477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 3751478 . T . PASS END=3751478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 3751479 . G . PASS END=3751483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 3751484 . A . PASS END=3751484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr2 3751485 . G . PASS END=3751485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 3751486 . C . PASS END=3751487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:11,0 chr2 3751488 . G . PASS END=3751488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:12,0 chr2 3751489 . C . PASS END=3751489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 3751490 . T . PASS END=3751490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr2 3751491 . C . PASS END=3751492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 3751493 . C . PASS END=3751493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:10,0 chr2 3751494 . G . PASS END=3751499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr2 3751500 . G . PASS END=3751500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:10,0 chr2 3751501 . G . PASS END=3751503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 3751504 . G . PASS END=3751504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:10,0 chr2 3751505 . A . PASS END=3751506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 3751507 . G . PASS END=3751508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 3751509 . C . PASS END=3751510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 3751511 . C . PASS END=3751512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 3751513 . T . PASS END=3751525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,405:0,33,255:12,0 chr2 3751526 . G . PASS END=3751526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr2 3751527 . C . PASS END=3751533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 3751534 . A . PASS END=3751536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:10,0 chr2 3751537 . C . PASS END=3751540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr2 3751541 . C . PASS END=3751541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr2 3751542 . G . PASS END=3751542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 3751543 . C . PASS END=3751543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,351:0,5,255:10,0 chr2 3751544 . G . PASS END=3751549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr2 3751550 . A . PASS END=3751550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 3751551 . C . PASS END=3751560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:11,0 chr2 3751561 . G . PASS END=3751561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 3751562 . G . PASS END=3751568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 3751569 . C . PASS END=3751616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 3751617 . C . PASS END=3751619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 3751620 . G . PASS END=3751620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr2 3751621 . G . PASS END=3751624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 3751625 . T . PASS END=3751625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr2 3751626 . C . PASS END=3751628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 3754555 . A . PASS END=3754568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:41:0,96,1440:0,110,255:37,0 chr2 3756139 . T . PASS END=3756190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:67:0,120,1800:0,173,255:40,0 chr2 3774593 . A . PASS END=3774669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:65:0,120,1800:0,158,255:40,0 chr2 3775611 . T . PASS END=3775624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,878:0,62,255:25,0 chr2 3775625 . A . PASS END=3775629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,825:0,39,255:22,0 chr2 3775630 . A . PASS END=3775632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr2 3775633 . G . PASS END=3775637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,795:0,33,255:23,0 chr2 3775638 . T . PASS END=3775638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 3775639 . C . PASS END=3775639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr2 3775640 . C . PASS END=3775645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr2 3775646 . A . PASS END=3775675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:37,0 chr2 3775676 . C . PASS END=3775712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:38:0,95,1514:0,95,255:40,0 chr2 3775713 . G T, 49.92 PASS DP=39;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=2.711;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,19,0:0.487,0.000:39:12,12,0:8,7,0:48:85,0,50,651,691,1342:255,0,255:20,0:4.9924e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,8,6,13:12,8,7,12 chr2 3775714 . C . PASS END=3775750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,93,255:36,0 chr2 3775751 . T . PASS END=3775755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 3775756 . A . PASS END=3775764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr2 3789510 . T . PASS END=3789510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 3789511 . G . PASS END=3789561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:32:0,83,1043:0,83,255:35,0 chr2 3789562 . A . PASS END=3789562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:34,0 chr2 3789563 . A . PASS END=3789623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:37:0,84,1260:0,87,255:40,0 chr2 3789624 . A . PASS END=3789626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr2 3789627 . A . PASS END=3789627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 3789628 . G . PASS END=3789638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:24,0 chr2 3800353 . A . PASS END=3800490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:96:43:0,96,1440:0,115,255:40,0 chr2 3802182 . A . PASS END=3802224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:96:0,120,1800:0,253,255:40,0 chr2 3814504 . C . PASS END=3814530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:34,0 chr2 3815344 . G . PASS END=3815470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:50:0,115,1755:0,115,255:40,0 chr2 3816901 . A . PASS END=3816903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 3816904 . G . PASS END=3816904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 3816905 . T . PASS END=3816963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1172:0,83,255:40,0 chr2 3816964 . A . PASS END=3816964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1311:0,51,255:35,0 chr2 3816965 . G . PASS END=3816999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,96,255:38,0 chr2 3817000 . A . PASS END=3817001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 3826405 . G . PASS END=3826474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:79:0,120,1800:0,207,255:40,0 chr2 3832649 . G . PASS END=3832690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:80:0,120,1800:0,227,255:40,0 chr2 3835998 . A . PASS END=3836009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,248,255:40,0 chr2 3840500 . G . PASS END=3840538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,173,255:40,0 chr2 3887846 . A . PASS END=3887902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,144,255:40,0 chr2 3894744 . A . PASS END=3894773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,198,255:40,0 chr2 4070308 . A . PASS END=4070323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:26,0 chr2 4070324 . G . PASS END=4070346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 4070347 . G . PASS END=4070347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 4070348 . C . PASS END=4070349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 4070350 . T . PASS END=4070368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr2 4070369 . T . PASS END=4070371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 4070372 . G . PASS END=4070372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 4070373 . C . PASS END=4070376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 4070377 . A . PASS END=4070377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 4070378 . C . PASS END=4070387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 4070388 . C . PASS END=4070389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 4070390 . C . PASS END=4070390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 4070391 . C . PASS END=4070393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 4071873 . G . PASS END=4071891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,994:0,81,255:36,0 chr2 4071892 . T C, 46.43 PASS DP=36;MQ=250.00;MQRankSum=4.981;ReadPosRankSum=2.677;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,14,0:0.389,0.000:36:12,8,0:10,6,0:46:81,0,50,501,729,1230:255,0,255:21,0:4.6431e+01,1.2063e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,11,3:12,10,7,7 chr2 4071893 . G . PASS END=4071929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,105,1575:0,108,255:40,0 chr2 4071930 . C . PASS END=4072134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:30:0,80,1147:0,80,255:40,0 chr2 4072135 . T . PASS END=4072135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 4072136 . G . PASS END=4072138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 4072139 . A . PASS END=4072139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 4072140 . C . PASS END=4072142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 4072143 . T . PASS END=4072144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 4072145 . G . PASS END=4072147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 4072148 . T . PASS END=4072155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1007:0,71,255:26,0 chr2 4072156 . C . PASS END=4072157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 4072158 . C . PASS END=4072158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:25,0 chr2 4072159 . C . PASS END=4072203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,840:0,61,255:26,0 chr2 4072204 . C . PASS END=4072204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 4072205 . A . PASS END=4072222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,908:0,72,255:25,0 chr2 4072223 . A . PASS END=4072257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr2 4072258 . G . PASS END=4072259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 4072260 . T C, 44.97 PASS DP=28;MQ=250.00;MQRankSum=4.291;ReadPosRankSum=2.613;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,10,0:0.357,0.000:28:10,5,0:8,5,0:44:80,0,50,357,636,993:255,0,255:18,0:4.4969e+01,1.5998e-04,5.3000e+01,3.5746e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,4,6:7,11,3,7 chr2 4072261 . G . PASS END=4072261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 4072262 . C . PASS END=4072279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 4072280 . G . PASS END=4072284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 4072285 . G . PASS END=4072285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 4072286 . G . PASS END=4072293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 4072294 . C . PASS END=4072297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 4072298 . G . PASS END=4072302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 4072303 . C . PASS END=4072314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 4072315 . C . PASS END=4072315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr2 4072316 . A . PASS END=4072327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 4072328 . T . PASS END=4072328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 4072329 . G . PASS END=4072357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1155:0,80,255:30,0 chr2 4072358 . A . PASS END=4072358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 4072359 . G . PASS END=4072391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1177:0,80,255:31,0 chr2 4072392 . C . PASS END=4072392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 4072393 . C . PASS END=4072395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 4072396 . C . PASS END=4072396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:31,0 chr2 4072397 . A . PASS END=4072522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:83:32:0,83,1156:0,83,255:40,0 chr2 4072523 . A . PASS END=4072548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,212,255:40,0 chr2 4072599 . T . PASS END=4072627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,174,255:40,0 chr2 5832854 . A . PASS END=5833084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1041:0,83,255:40,0 chr2 5833085 . G . PASS END=5833087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr2 5833088 . A . PASS END=5833088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 5833089 . T . PASS END=5833099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,976:0,70,255:26,0 chr2 5833100 . C . PASS END=5833104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 5833105 . C . PASS END=5833136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr2 5833137 . A . PASS END=5833138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 5833139 . A . PASS END=5833160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:22,0 chr2 5833161 . A . PASS END=5833167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:18,0 chr2 5833168 . G . PASS END=5833168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:16,0 chr2 5833169 . C . PASS END=5833181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:19,0 chr2 5833182 . T . PASS END=5833182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 5833183 . G . PASS END=5833185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 5833186 . C . PASS END=5833201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 5833202 . A . PASS END=5833212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:18,0 chr2 5833213 . C . PASS END=5833214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 5833215 . G . PASS END=5833215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:19,0 chr2 5833216 . G . PASS END=5833216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr2 5833217 . A . PASS END=5833219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 5833220 . A . PASS END=5833222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 5833223 . C . PASS END=5833225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 5833226 . A . PASS END=5833236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 5833237 . C . PASS END=5833243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,831:0,63,255:22,0 chr2 5833244 . A . PASS END=5833247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 5833248 . C . PASS END=5833248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:16,0 chr2 5833249 . C . PASS END=5833251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:17,0 chr2 5833252 . C . PASS END=5833252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:17,0 chr2 5833253 . G . PASS END=5833261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr2 5833262 . A . PASS END=5833262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:13,0 chr2 5833263 . G . PASS END=5833264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 5833265 . C . PASS END=5833269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr2 5833270 . G . PASS END=5833275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 5833276 . C . PASS END=5833280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 5833281 . C . LowGQ END=5833285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:15:0,0,413:0,0,255:13,2 chr2 5833286 . G . PASS END=5833308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr2 5833309 . A . PASS END=5833309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 5833310 . G . PASS END=5833310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 5833311 . G . PASS END=5833312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 5833313 . G . PASS END=5833325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 5833326 . A . PASS END=5833328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:13:0,23,405:0,23,255:11,0 chr2 5833329 . C . PASS END=5833350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 5833351 . A . PASS END=5833354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 5833355 . G . PASS END=5833356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 5833357 . C . PASS END=5833398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr2 5833399 . G . PASS END=5833401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 5833402 . C . PASS END=5833402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 5833403 . A . PASS END=5833405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 5833406 . G . PASS END=5833417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 5833418 . G . PASS END=5833418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr2 5833419 . G . PASS END=5833424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 5833425 . A . PASS END=5833425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 5833426 . C . PASS END=5833485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr2 5833486 . C . PASS END=5833486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 5833487 . G . PASS END=5833571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,299:0,33,255:13,1 chr2 5833572 . A . PASS END=5833572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 5833573 . A . PASS END=5833580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,374:0,36,255:12,0 chr2 5833581 . C . PASS END=5833588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 5833589 . G . PASS END=5833589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 5833590 . A . PASS END=5833590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 5833591 . G . PASS END=5833599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 5833600 . A . PASS END=5833600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr2 5833601 . C . PASS END=5833610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 5833611 . A . PASS END=5833622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 5833623 . A . LowGQ END=5833623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:9,0 chr2 5833624 . G . PASS END=5833630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 5833631 . G . PASS END=5833648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 5833649 . C . PASS END=5833649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr2 5833650 . T . PASS END=5833654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 5833655 . A . PASS END=5833655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 5833656 . G . PASS END=5833656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 5833657 . A . PASS END=5833657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,382:0,8,255:11,0 chr2 5833658 . C . PASS END=5833658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 5833659 . G . PASS END=5833663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 5833664 . A . PASS END=5833664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 5833665 . A . PASS END=5833669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 5833670 . G . PASS END=5833670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 5833671 . C . PASS END=5833671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 5833672 . C . PASS END=5833672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 5833673 . A . PASS END=5833673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 5833674 . A . PASS END=5833674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:13,0 chr2 5833675 . A . PASS END=5833682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 5833683 . C . PASS END=5833701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,404:0,33,255:13,0 chr2 5833702 . C . LowGQ END=5833702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr2 5833703 . T . PASS END=5833730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 5833731 . T . PASS END=5833731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 5833732 . C . PASS END=5833781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr2 5833782 . G . PASS END=5833783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 5833784 . C . PASS END=5833790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 5833791 . A . PASS END=5833791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 5833792 . C . PASS END=5833799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 5833800 . A . PASS END=5833800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:9,0 chr2 5833801 . G . PASS END=5833805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 5833806 . T . PASS END=5833807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 5833808 . A . PASS END=5833840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,435:0,33,255:13,0 chr2 5833841 . G . PASS END=5833863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr2 5833864 . C . PASS END=5833864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 5833865 . T . PASS END=5833866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 5833867 . G . PASS END=5833867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr2 5833868 . G . PASS END=5833885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 5833886 . A . PASS END=5833886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr2 5833887 . G . PASS END=5833891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 5833892 . A . PASS END=5833892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 5833893 . G . PASS END=5833909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 5833910 . A . PASS END=5833910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 5833911 . G . PASS END=5833920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,537:0,42,255:15,0 chr2 5833921 . G . PASS END=5833928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 5833929 . A . PASS END=5833938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 5833939 . G . PASS END=5833939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 5833940 . T . PASS END=5833940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 5833941 . T . PASS END=5833941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 5833942 . C . PASS END=5833942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 5833943 . G . PASS END=5833945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 5833946 . C . PASS END=5833993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:19:0,43,668:0,43,255:19,0 chr2 5833994 . C . PASS END=5834009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 5834010 . C . PASS END=5834012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 5834013 . C . PASS END=5834017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 5834018 . A . PASS END=5834018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 5834019 . A . PASS END=5834020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 5834021 . C . PASS END=5834021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,806:0,25,255:21,0 chr2 5834022 . T . PASS END=5834023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,845:0,56,255:24,0 chr2 5834024 . T . PASS END=5834042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,878:0,61,255:26,0 chr2 5834043 . A . PASS END=5834043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:25,0 chr2 5834044 . G . PASS END=5834044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:25,0 chr2 5834045 . G . PASS END=5834051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,920:0,84,255:28,0 chr2 5834052 . A . PASS END=5834054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 5834055 . C . PASS END=5834077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr2 5834078 . T . PASS END=5834082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:28:0,74,1039:0,74,255:26,0 chr2 5834083 . C . PASS END=5834084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 5834085 . T . PASS END=5834085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 5834086 . C . PASS END=5834101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 5834102 . T . PASS END=5834129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,909:0,62,255:26,0 chr2 5834130 . C . PASS END=5834130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 5834131 . G . PASS END=5834146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:24,0 chr2 5834147 . G . PASS END=5834147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 5834148 . C . PASS END=5834149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 5834150 . A . PASS END=5834173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr2 5834174 . T . PASS END=5834174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 5834175 . A . PASS END=5834179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 6980701 . T . PASS END=6980803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:34:0,93,1395:0,101,255:40,0 chr2 6980804 . T . PASS END=6980808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 6980809 . C . PASS END=6980809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 6989981 . C . PASS END=6989993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr2 6989994 . A . PASS END=6989996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 6989997 . C . PASS END=6989998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 6989999 . A . PASS END=6990010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr2 6990011 . G . PASS END=6990021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 6990022 . T . PASS END=6990022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:27,0 chr2 6990023 . C . PASS END=6990023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 6990024 . T . PASS END=6990024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 6990025 . G . PASS END=6990029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 6990030 . A . PASS END=6990030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 6990031 . C . PASS END=6990093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1074:0,80,255:33,0 chr2 6990094 . A . PASS END=6990104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1078:0,74,255:26,0 chr2 6991577 . C . PASS END=6991582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:24,0 chr2 6991583 . T . PASS END=6991583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,764:0,33,255:23,0 chr2 6991584 . T . PASS END=6991644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,887:0,62,255:26,0 chr2 6991645 . C . PASS END=6991650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 6991651 . G . PASS END=6991665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 6991666 . C . PASS END=6991667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 6991668 . T . PASS END=6991681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,939:0,67,255:26,0 chr2 6991682 . G . PASS END=6991699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1013:0,87,255:30,0 chr2 6991700 . A . PASS END=6991700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 6991701 . G . PASS END=6991702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 6991703 . T . PASS END=6991703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:26,0 chr2 6991704 . T . PASS END=6991715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 6991716 . T . PASS END=6991716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 6991717 . C . PASS END=6991720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 6991721 . C . PASS END=6991733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:27:0,63,945:0,80,255:26,0 chr2 6991734 . G . PASS END=6991738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 6991739 . A . PASS END=6991739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 6991740 . T . PASS END=6991759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 6991760 . G . PASS END=6991761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 6991762 . G . PASS END=6991774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 6991775 . C . PASS END=6991775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 6991776 . T . PASS END=6991783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:28,0 chr2 6991784 . T . PASS END=6991810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,68,255:26,0 chr2 6991811 . G . PASS END=6991814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 7001315 . C . PASS END=7001516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:32:0,81,1202:0,83,255:40,0 chr2 7003595 . C . PASS END=7003680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:32:0,80,1125:0,80,255:40,0 chr2 7003681 . G . PASS END=7003681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:28,0 chr2 7003682 . C . PASS END=7003684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1350:0,96,255:30,0 chr2 7003685 . G . PASS END=7003685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1080:0,65,255:29,0 chr2 7003686 . G . PASS END=7003692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:30,0 chr2 7003693 . G . PASS END=7003693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr2 7003694 . G . PASS END=7003696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr2 7003697 . T . PASS END=7003697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 7003698 . A . PASS END=7003699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 7003700 . A . PASS END=7003701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 7003702 . G . PASS END=7003702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:23,0 chr2 7003703 . A . PASS END=7003709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:26,0 chr2 7005153 . C . PASS END=7005155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 7005156 . C . PASS END=7005182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,458:0,42,255:15,0 chr2 7005183 . G . PASS END=7005184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,604:0,35,255:17,0 chr2 7005185 . C . PASS END=7005186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 7005187 . G . PASS END=7005187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 7005188 . G . PASS END=7005198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,615:0,40,255:19,0 chr2 7005199 . G . PASS END=7005200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 7005201 . A . PASS END=7005202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 7005203 . T . PASS END=7005203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:15,0 chr2 7005204 . G . PASS END=7005209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:16,0 chr2 7005210 . G . PASS END=7005210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:15,0 chr2 7005211 . T . PASS END=7005227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,651:0,41,255:18,0 chr2 7005228 . C . PASS END=7005228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 7005229 . A . PASS END=7005240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 7005241 . G . PASS END=7005242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:14,0 chr2 7005243 . G . PASS END=7005246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 7005247 . G . PASS END=7005249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr2 7005250 . A . PASS END=7005250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 7005251 . C . PASS END=7005258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,837:0,66,255:23,0 chr2 7005259 . G . PASS END=7005259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 7005260 . C . PASS END=7005262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 7005263 . A . PASS END=7005263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 7005264 . G . PASS END=7005323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,767:0,60,255:26,0 chr2 7005324 . C . PASS END=7005327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 7005328 . T . PASS END=7005331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 7005332 . C . PASS END=7005359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,754:0,66,255:22,0 chr2 7005360 . T . PASS END=7005361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 7005362 . C . PASS END=7005368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 7005369 . A G, 116.22 PASS DP=24;MQ=248.53;FractionInformativeReads=0.958 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,891,69,891:255,72,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,14:0,0,11,12 chr2 7005370 . C . PASS END=7005379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 7005380 . G . PASS END=7005380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 7005381 . C . PASS END=7005383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 7005384 . C . PASS END=7005406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,43,255:19,0 chr2 7005407 . C . PASS END=7005424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr2 7005425 . C . PASS END=7005443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 7005444 . C . PASS END=7005466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 7005467 . C . PASS END=7005478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 7005479 . A . PASS END=7005519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,280:0,24,255:9,0 chr2 7005520 . C . PASS END=7005540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:4:0,12,155:0,12,155:6,0 chr2 7005541 . T . PASS END=7005555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,78:0,6,78:2,0 chr2 7005556 . G . PASS END=7005557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 7005558 . C . PASS END=7005588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr2 7005589 . G . PASS END=7005598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:6,0 chr2 7005599 . C . PASS END=7005600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 7005601 . C . PASS END=7005604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 7005605 . G . PASS END=7005624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 7005625 . G . PASS END=7005693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr2 7005694 . A . PASS END=7005701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 7005702 . C . PASS END=7005704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 7005705 . G . PASS END=7005705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 7005706 . G . PASS END=7005714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:12,0 chr2 7005715 . G . PASS END=7005715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 7005716 . G . PASS END=7005721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 7005722 . C . PASS END=7005723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 7005724 . A . PASS END=7005724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:8,0 chr2 7005725 . G . PASS END=7005726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 7005727 . A . PASS END=7005727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 7005728 . C . PASS END=7005748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 7005749 . T . PASS END=7005757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr2 7005758 . C . PASS END=7005774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 7005775 . C . PASS END=7005786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,225:6,0 chr2 7005787 . C . PASS END=7005827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr2 7006035 . A . PASS END=7006075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,119:0,15,119:6,0 chr2 7006076 . G . PASS END=7006100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 7006101 . C . PASS END=7006115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 7006116 . G . PASS END=7006152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr2 7006153 . A . PASS END=7006153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 7006154 . G . PASS END=7006176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr2 7017932 . A . PASS END=7017932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 7017933 . T . PASS END=7017933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 7017934 . G . PASS END=7017940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:26,0 chr2 7017941 . C . PASS END=7017941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 7017942 . T . PASS END=7017942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:25,0 chr2 7017943 . T . PASS END=7017944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 7017945 . C . PASS END=7017948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:29,0 chr2 7017949 . T . PASS END=7017949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 7017950 . G . PASS END=7017950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 7017951 . C . PASS END=7017951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 7017952 . T . PASS END=7017952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:27,0 chr2 7017953 . G . PASS END=7017955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 7017956 . T . PASS END=7017956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:28,0 chr2 7017957 . T . PASS END=7017964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 7017965 . A . PASS END=7017965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 7017966 . A . PASS END=7018066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1088:0,83,255:40,0 chr2 7018067 . A . PASS END=7018067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:27,0 chr2 7018068 . G . PASS END=7018069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 7018070 . A . PASS END=7018070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 7018071 . G . PASS END=7018076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 7018077 . A . PASS END=7018152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr2 7018153 . C . PASS END=7018153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:22,0 chr2 7018154 . G . PASS END=7018175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,876:0,65,255:25,0 chr2 7018176 . A . PASS END=7018176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 7018177 . G . PASS END=7018199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,970:0,75,255:26,0 chr2 7018200 . G . PASS END=7018201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 7018202 . T . PASS END=7018233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,742:0,61,255:26,0 chr2 7018234 . C . PASS END=7018234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 7018235 . C . PASS END=7018239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 7018240 . G . PASS END=7018240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 7018241 . G . PASS END=7018245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 7018246 . A . PASS END=7018247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 7018248 . A . PASS END=7018248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:18,0 chr2 7018249 . G . PASS END=7018277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,46,255:19,0 chr2 7023502 . G . PASS END=7023529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,939:0,62,255:26,0 chr2 7023530 . A . PASS END=7023532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,971:0,81,255:28,0 chr2 7023533 . G . PASS END=7023535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 7023536 . A . PASS END=7023537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 7023538 . T . PASS END=7023538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 7023539 . T . PASS END=7023548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,918:0,80,255:32,0 chr2 7023549 . C . PASS END=7023549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr2 7023550 . G . PASS END=7023569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1172:0,83,255:32,0 chr2 7023570 . T . PASS END=7023570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 7023571 . T . PASS END=7023586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 7023587 . A . PASS END=7023587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:28,0 chr2 7023588 . G . PASS END=7023594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 7023595 . T . PASS END=7023644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:26,0 chr2 7023645 . A . PASS END=7023645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 7023646 . G . PASS END=7023647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 7023648 . T . PASS END=7023648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 7023649 . G . PASS END=7023656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 7023657 . A . PASS END=7023657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 7023658 . A . PASS END=7023663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 7027066 . G . PASS END=7027068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 7027069 . A . PASS END=7027069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 7027070 . G . PASS END=7027207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1081:0,80,255:40,0 chr2 7027208 . T . PASS END=7027208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:78:54:0,78,1445:0,78,255:40,0 chr2 7027209 . T . PASS END=7027210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 7027211 . C . LowGQ END=7027211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,13:53:0:53:0,0,1120:57,0,255:38,0 chr2 7027212 . A . PASS END=7027213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 7027214 . G . PASS END=7027214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:42:53:0,42,1348:0,42,255:40,0 chr2 7027215 . A . PASS END=7027216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,142,255:40,0 chr2 7027217 . A . PASS END=7027217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:43:53:0,43,1482:0,43,255:40,0 chr2 7027218 . A . PASS END=7027219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,142,255:40,0 chr2 7027220 . T . LowGQ END=7027220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,13:53:0:53:0,0,1150:107,0,255:39,0 chr2 7027221 . T . PASS END=7027221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,139,255:40,0 chr2 7027222 . C . LowGQ END=7027222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,15:52:0:52:0,0,1031:151,0,255:35,0 chr2 7027223 . T . PASS END=7027223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:59:52:0,59,1529:0,59,255:40,0 chr2 7027224 . G . PASS END=7027224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,7:52:39:52:0,39,1382:0,39,255:40,0 chr2 7027225 . T . PASS END=7027225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 7027226 . C . PASS END=7027226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:59:53:0,59,1395:0,59,255:40,0 chr2 7027227 . A . PASS END=7027227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,142,255:40,0 chr2 7027228 . T . PASS END=7027228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:43:53:0,43,1432:0,43,255:40,0 chr2 7027229 . T . PASS END=7027229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 7027230 . A . PASS END=7027230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:31:53:0,31,1515:0,31,255:40,0 chr2 7027231 . A . PASS END=7027231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 7027232 . T . PASS END=7027232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:29:53:0,29,1517:0,29,255:40,0 chr2 7027233 . C . LowGQ END=7027233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,14:53:0:53:0,0,1095:118,0,255:38,0 chr2 7027234 . G . PASS END=7027234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:51:52:0,51,1515:0,51,255:40,0 chr2 7027235 . T . PASS END=7027237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,123,255:40,0 chr2 7027238 . C . PASS END=7027238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,9:52:6:52:0,6,1332:0,6,255:40,0 chr2 7027239 . A . PASS END=7027241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:99:52:0,106,1618:0,106,255:40,0 chr2 7027242 . G . LowGQ END=7027242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,8:52:0:52:0,0,1365:35,0,255:40,0 chr2 7027243 . T . PASS END=7027245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:51:0,120,1800:0,123,255:40,0 chr2 7027246 . A . PASS END=7027246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:72:51:0,72,1570:0,72,255:40,0 chr2 7027247 . A . PASS END=7027247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 7027248 . G . PASS END=7027248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,8:51:6:51:0,6,1424:0,6,255:40,0 chr2 7027249 . A . PASS END=7027251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:99:51:0,103,1577:0,103,255:40,0 chr2 7027252 . A . PASS END=7027252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,6:52:56:52:0,56,1527:0,56,255:40,0 chr2 7027253 . C . PASS END=7027254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,120,1800:0,130,255:40,0 chr2 7027255 . T . PASS END=7027255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:28:49:0,28,1451:0,28,255:40,0 chr2 7027256 . G . PASS END=7027257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:91:49:0,91,1532:0,91,255:40,0 chr2 7027258 . C . PASS END=7027258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:42:49:0,42,1459:0,42,255:39,0 chr2 7027259 . G . PASS END=7027260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:92:49:0,92,1647:0,92,255:40,0 chr2 7027261 . A . PASS END=7027261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1570:0,75,255:40,0 chr2 7027262 . A . PASS END=7027262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:92:49:0,92,1631:0,92,255:34,0 chr2 7027263 . C . PASS END=7027263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:58:49:0,58,1507:0,58,255:32,0 chr2 7027264 . A . PASS END=7027264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,99,1586:0,99,255:36,0 chr2 7027265 . G . LowGQ END=7027265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:46:0,0,1290:0,0,255:32,0 chr2 7027266 . A . PASS END=7027266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,108,1620:0,138,255:36,0 chr2 7027267 . T . PASS END=7027268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:50:46:0,50,1449:0,50,255:33,0 chr2 7027269 . A . PASS END=7027271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,108,1620:0,138,255:36,0 chr2 7027272 . G . LowGQ END=7027272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:0:46:0,0,1225:6,0,255:29,0 chr2 7027273 . C . PASS END=7027275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1344:0,93,255:35,0 chr2 7027276 . T . PASS END=7027276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1360:0,68,255:33,0 chr2 7027277 . A . PASS END=7027282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1337:0,90,255:36,0 chr2 7027283 . T . LowGQ END=7027283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:0:39:0,0,1113:0,0,255:33,0 chr2 7027284 . G . PASS END=7027285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1335:0,97,255:35,0 chr2 7027286 . C . PASS END=7027286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1288:0,67,255:31,0 chr2 7027287 . C . PASS END=7027287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:38:0,96,1440:0,97,255:31,0 chr2 7027288 . G . PASS END=7027288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1261:0,42,255:31,0 chr2 7027289 . C . PASS END=7027289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1246:0,72,255:31,0 chr2 7027290 . T . PASS END=7027290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1211:0,56,255:31,0 chr2 7027291 . G . PASS END=7027291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1221:0,72,255:31,0 chr2 7027292 . G . PASS END=7027295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1221:0,91,255:31,0 chr2 7030307 . G . PASS END=7030456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:84:42:0,84,1260:0,110,255:40,0 chr2 7033802 . A . PASS END=7033834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:80:0,120,1800:0,198,255:40,0 chr2 7035909 . A . PASS END=7035917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr2 7035918 . C . PASS END=7035922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 7035923 . C . PASS END=7035923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 7035924 . T . PASS END=7035924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 7035925 . G . PASS END=7036073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:84:28:0,84,1033:0,84,255:40,0 chr2 7137058 . A . PASS END=7137060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 7137061 . A . PASS END=7137061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:27,0 chr2 7137062 . C . PASS END=7137172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:30:0,82,1122:0,82,255:40,0 chr2 7137173 . A . PASS END=7137177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1015:0,71,255:26,0 chr2 7137178 . A . PASS END=7137192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:45:19:0,45,675:0,57,255:19,0 chr2 7154585 . T . PASS END=7154585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 7154586 . G . PASS END=7154594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1141:0,82,255:33,0 chr2 7154595 . A . PASS END=7154631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:33:0,88,1174:0,88,255:40,0 chr2 7154632 . T C, 178.96 PASS DP=44;MQ=249.69;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,23,0:0,21,0:129:217,132,0,1666,132,1666:255,132,0:0,0:1.7896e+02,1.2896e+02,0.0000e+00,4.5000e+02,1.6373e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,24:0,0,21,23 chr2 7154633 . G . PASS END=7154669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,116,1568:0,116,255:40,0 chr2 7154670 . G . PASS END=7154689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,120,1800:0,126,255:40,0 chr2 7154843 . A . PASS END=7154903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:81:0,120,1800:0,214,255:40,0 chr2 7160604 . A . PASS END=7160616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1038:0,84,255:30,0 chr2 7160617 . T . PASS END=7160617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 7160618 . C . PASS END=7160683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1094:0,87,255:32,0 chr2 7160684 . C . PASS END=7160684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr2 7160685 . A . PASS END=7160690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:31,0 chr2 7160691 . C . PASS END=7160693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 7160694 . A . PASS END=7160695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 7160696 . C . PASS END=7160698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr2 7160699 . G . PASS END=7160699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 7160700 . T . PASS END=7160700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 7160701 . G . PASS END=7160717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 7160718 . G . PASS END=7160768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr2 7160769 . G . PASS END=7160811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr2 7164500 . T . PASS END=7164503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 7164504 . G . PASS END=7164504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 7164505 . C . PASS END=7164601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,504:0,42,255:19,0 chr2 7164602 . G . PASS END=7164602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 7164603 . A . PASS END=7164611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:18,0 chr2 7164612 . C . PASS END=7164612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 7164613 . A . PASS END=7164636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 7164637 . A . PASS END=7164637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 7164638 . G . PASS END=7164645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,446:0,45,255:15,0 chr2 7164646 . A . PASS END=7164646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr2 7164647 . C . PASS END=7164647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 7170257 . G . PASS END=7170346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:86:39:0,86,1370:0,86,255:40,0 chr2 7179760 . G . PASS END=7179873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:36:0,93,1296:0,93,255:40,0 chr2 7179874 . G . PASS END=7179874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr2 7179875 . A . PASS END=7179882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr2 7179883 . C . PASS END=7179891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:28:0,69,1035:0,84,255:26,0 chr2 7185487 . G . PASS END=7185540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,164,255:40,0 chr2 7208347 . G . PASS END=7208361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,187,255:40,0 chr2 7208362 . G . PASS END=7208384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:78:0,120,1800:0,207,255:40,0 chr2 7208385 . T . PASS END=7208406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,177,255:40,0 chr2 7213293 . G . PASS END=7213293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 7213294 . G . PASS END=7213303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:26,0 chr2 7213304 . G . PASS END=7213317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 7213318 . G . PASS END=7213321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 7213322 . G . PASS END=7213325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 7213326 . A . PASS END=7213326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr2 7213327 . C . PASS END=7213327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 7213328 . T . PASS END=7213328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 7213329 . C . PASS END=7213340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 7213341 . C . PASS END=7213341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 7213342 . C . PASS END=7213349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 7213350 . T . PASS END=7213351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr2 7213352 . C . PASS END=7213380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr2 7213381 . T . PASS END=7213381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr2 7213382 . C . PASS END=7213386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 7213387 . C . PASS END=7213387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:25,0 chr2 7213388 . C . PASS END=7213389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 7213390 . C . PASS END=7213414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,930:0,70,255:26,0 chr2 7213415 . C . PASS END=7213415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 7213416 . C . PASS END=7213438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,817:0,61,255:26,0 chr2 7213439 . G . PASS END=7213439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,909:0,50,255:25,0 chr2 7213440 . C . PASS END=7213478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:25,0 chr2 7213479 . A . PASS END=7213496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,52,255:19,0 chr2 7213497 . A . PASS END=7213497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,527:0,12,255:13,0 chr2 7213498 . A . PASS END=7213502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 7215725 . T . PASS END=7215727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 8822296 . A . PASS END=8822296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 8822297 . T . PASS END=8822297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 8822298 . G . PASS END=8822298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 8822299 . A . PASS END=8822299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 8822300 . A . PASS END=8822337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,615:0,40,255:19,0 chr2 8822338 . C . PASS END=8822364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:26,0 chr2 8822365 . C . PASS END=8822365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:25,0 chr2 8822366 . G . PASS END=8822366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 8822367 . G . PASS END=8822369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 8822370 . C . PASS END=8822370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr2 8822371 . A . PASS END=8822371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 8822372 . A . PASS END=8822385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1108:0,74,255:27,0 chr2 8822386 . G . PASS END=8822395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr2 8822396 . G . PASS END=8822407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr2 8822408 . A . PASS END=8822408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 8822409 . C . PASS END=8822415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,803:0,66,255:23,0 chr2 8822416 . G . PASS END=8822441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,682:0,54,255:19,0 chr2 8822442 . G . PASS END=8822442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr2 8822443 . G . PASS END=8822458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr2 8822459 . A . PASS END=8822459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 8822460 . G . PASS END=8822464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,593:0,51,255:18,0 chr2 8822465 . A . PASS END=8822465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 8822466 . G . PASS END=8822466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 8822467 . A . PASS END=8822467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,523:0,37,255:17,0 chr2 8822468 . A . PASS END=8822472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr2 8822473 . A . PASS END=8822473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 8822474 . G . PASS END=8822501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,652:0,46,255:20,0 chr2 8822502 . C . PASS END=8822504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 8822505 . C . PASS END=8822505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:21,0 chr2 8822506 . T . PASS END=8822509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:19,0 chr2 8822510 . T . PASS END=8822546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,900:0,65,255:26,0 chr2 8822547 . T . PASS END=8822547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 8822548 . A . PASS END=8822574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,854:0,66,255:24,0 chr2 8822575 . G . PASS END=8822575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 8822576 . G . PASS END=8822594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 8822595 . G . PASS END=8822595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 8822596 . A . PASS END=8822603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 8822604 . G . PASS END=8822604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 8822605 . A . PASS END=8822605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 8822606 . C . PASS END=8822628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,660:0,43,255:19,0 chr2 8822629 . A . PASS END=8822629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 8822630 . T . PASS END=8822639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:15,0 chr2 8822640 . G . PASS END=8822643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 8822973 . G . PASS END=8823029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,119,1778:0,119,255:40,0 chr2 8867023 . T . PASS END=8867073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:81:44:0,81,1596:0,81,255:40,0 chr2 8867329 . T . PASS END=8867337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 8867338 . C . PASS END=8867342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 8867343 . C . PASS END=8867363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 8867364 . G . PASS END=8867364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 8867365 . G . PASS END=8867365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 8867366 . T . PASS END=8867377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 8867378 . C . PASS END=8867381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 8867382 . C . PASS END=8867386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:10,0 chr2 8867387 . T . PASS END=8867397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:10:0,27,405:0,30,255:9,0 chr2 8870850 . T . PASS END=8870851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr2 8870852 . A . PASS END=8870931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,997:0,84,255:40,0 chr2 8870932 . A . PASS END=8870932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1397:0,74,255:39,0 chr2 8870933 . G . PASS END=8872112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:40:0,95,1500:0,95,255:40,0 chr2 8872114 . T . PASS END=8872114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 8873573 . C . PASS END=8873575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 8873576 . G . PASS END=8873576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 8873577 . C . PASS END=8873577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 8873578 . C . PASS END=8873579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 8873580 . A . PASS END=8873587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,738:0,63,255:25,0 chr2 8873588 . T . PASS END=8873588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 8873589 . A . PASS END=8873600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr2 8873601 . G . PASS END=8873601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr2 8873602 . G . PASS END=8873604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr2 8873605 . C . PASS END=8873606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 8873607 . T . PASS END=8873607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 8873608 . T . PASS END=8873608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:27,0 chr2 8873609 . C . PASS END=8873671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1111:0,80,255:34,0 chr2 8873672 . A . PASS END=8873672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 8873673 . G . PASS END=8873673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 8873674 . A . PASS END=8873674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:26,0 chr2 8873675 . G . PASS END=8873691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr2 8873692 . T . PASS END=8873737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,70,255:26,0 chr2 8873738 . C . PASS END=8873738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 8873739 . A . PASS END=8873756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,853:0,69,255:23,0 chr2 8873757 . G . PASS END=8873757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 8873758 . A . PASS END=8873766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 8873767 . T . PASS END=8873799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:15:0,44,537:0,44,255:19,0 chr2 8873800 . A . PASS END=8873810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 8874785 . T . PASS END=8874883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:84:36:0,84,1260:0,87,255:40,0 chr2 8876998 . C . PASS END=8877129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:34:0,81,1215:0,98,255:40,0 chr2 8880282 . C . PASS END=8880314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,164,255:40,0 chr2 8887275 . C . PASS END=8887331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,146,255:40,0 chr2 8888017 . T . PASS END=8888104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:32:0,84,1197:0,96,255:40,0 chr2 8888105 . G . PASS END=8888116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1031:0,71,255:25,0 chr2 8888117 . G . PASS END=8888117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:23,0 chr2 8888118 . G . PASS END=8888125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,945:0,62,255:24,0 chr2 8888126 . A . PASS END=8888126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:20,0 chr2 8888127 . A . PASS END=8888130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 8889537 . T . PASS END=8889551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,149,255:40,0 chr2 8890242 . C . PASS END=8890243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 8890244 . T . PASS END=8890244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 8890245 . G . PASS END=8890247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 8890248 . G . PASS END=8890248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr2 8890249 . T . PASS END=8890252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 8890253 . A . PASS END=8890273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr2 8890274 . T . PASS END=8890278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 8890279 . C . PASS END=8890279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 8890280 . T . PASS END=8890284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 8890285 . T . PASS END=8890287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 8890288 . C . PASS END=8890309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:23,0 chr2 8890310 . C . PASS END=8890310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 8890311 . C . PASS END=8890337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,961:0,75,255:26,0 chr2 8890338 . G . PASS END=8890339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 8890340 . A . PASS END=8890356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,939:0,64,255:26,0 chr2 8890357 . G . PASS END=8890357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 8890358 . A . PASS END=8890397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,892:0,69,255:24,0 chr2 8890398 . C . PASS END=8890399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 8890400 . C . PASS END=8890405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:20,0 chr2 8890406 . G . PASS END=8890447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:19,0 chr2 8890448 . C . PASS END=8890465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 8891596 . C . PASS END=8891598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr2 8891599 . C . PASS END=8891600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 8891601 . A . PASS END=8891601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr2 8891602 . T . PASS END=8891602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 8891603 . A . PASS END=8891603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr2 8891604 . A . PASS END=8891604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 8891605 . T . PASS END=8891610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1135:0,82,255:33,0 chr2 8891611 . G . PASS END=8891612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr2 8891613 . A . PASS END=8891618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1092:0,89,255:35,0 chr2 8891619 . G . PASS END=8891619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:32,0 chr2 8891620 . G . PASS END=8891752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:36:0,80,1258:0,80,255:40,0 chr2 8891753 . T . PASS END=8891753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1504:0,77,255:35,0 chr2 8891754 . G . PASS END=8891758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1426:0,101,255:35,0 chr2 8891759 . A . PASS END=8891774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:34:0,69,1080:0,69,255:26,0 chr2 8897836 . T . PASS END=8897837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr2 8897838 . A . PASS END=8897838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr2 8897839 . G . PASS END=8897841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 8897842 . C . PASS END=8897855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,824:0,72,255:25,0 chr2 8897856 . C . PASS END=8897856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 8897857 . A . PASS END=8897863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:30,0 chr2 8897864 . A . PASS END=8897865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 8897866 . T . PASS END=8897868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1046:0,90,255:30,0 chr2 8897869 . C . PASS END=8897869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 8897870 . T . PASS END=8897875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1058:0,90,255:31,0 chr2 8897876 . A . PASS END=8897876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 8897877 . T . PASS END=8897887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1101:0,93,255:31,0 chr2 8897888 . T . PASS END=8897888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 8897889 . C . PASS END=8897895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 8897896 . A . PASS END=8897896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr2 8897897 . C . PASS END=8897906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1177:0,80,255:30,0 chr2 8897907 . C . PASS END=8897907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 8897908 . T . PASS END=8897909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 8897910 . C . PASS END=8897910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 8897911 . A . PASS END=8897912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 8897913 . A . PASS END=8897913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 8897914 . G . PASS END=8897914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 8897915 . C . PASS END=8897915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr2 8897916 . A . PASS END=8897916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 8897917 . T . PASS END=8897917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 8910800 . C . PASS END=8910949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:37:0,80,1309:0,80,255:40,0 chr2 8910950 . C . PASS END=8910957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1350:0,111,255:31,0 chr2 8910958 . T . PASS END=8910958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:30,0 chr2 8910959 . C . PASS END=8910962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1395:0,99,255:32,0 chr2 8916878 . C . PASS END=8916879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 8916880 . G . PASS END=8916880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 8916881 . T . PASS END=8916884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 8916885 . A . PASS END=8916896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:33,0 chr2 8916897 . A . PASS END=8916897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:32,0 chr2 8916898 . A . PASS END=8917015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:80:32:0,80,1106:0,80,255:40,0 chr2 8917016 . A . PASS END=8917016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:27,0 chr2 8917017 . A . PASS END=8917021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 8917022 . C . PASS END=8917022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 8918769 . C . PASS END=8918840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:39:0,114,1613:0,117,255:40,0 chr2 8918841 . A . PASS END=8918841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1698:0,78,255:40,0 chr2 8918842 . G . PASS END=8918857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,141,255:40,0 chr2 8919026 . C . PASS END=8919259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:44:0,103,1729:0,103,255:40,0 chr2 8919260 . G . PASS END=8919269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,152,255:40,0 chr2 8919804 . A . PASS END=8919944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:37:0,93,1395:0,98,255:40,0 chr2 8925871 . T . PASS END=8925931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1088:0,80,255:40,0 chr2 8925932 . C . PASS END=8925932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:78:43:0,78,1164:0,78,255:39,0 chr2 8925933 . T . PASS END=8925977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:43:0,85,1316:0,85,255:40,0 chr2 8925978 . A . PASS END=8925978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:7:54:0,7,1731:0,7,255:40,0 chr2 8925979 . G . PASS END=8926160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,103,1539:0,103,255:40,0 chr2 8926336 . C . PASS END=8926461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:44:0,93,1395:0,94,255:40,0 chr2 8926462 . G . PASS END=8926465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:75:44:0,75,1125:0,93,255:25,0 chr2 8926466 . A . PASS END=8926466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1412:0,46,255:24,0 chr2 8926467 . T . PASS END=8926470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:66:39:0,66,990:0,79,255:23,0 chr2 8926471 . A . PASS END=8926473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:29:0,41,919:0,41,255:21,0 chr2 8926474 . C . PASS END=8926474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,917:0,10,255:19,0 chr2 8926475 . T . PASS END=8926476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,841:0,39,255:19,0 chr2 8926477 . T . PASS END=8926477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 8926478 . A . PASS END=8926478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:19,0 chr2 8926479 . A . PASS END=8926480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:20:25:0,20,798:0,20,255:18,0 chr2 8926481 . C . PASS END=8926481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:18,0 chr2 8926482 . A . PASS END=8926483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr2 8926484 . A . PASS END=8926487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:17,0 chr2 8928777 . C . PASS END=8928942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:30:0,86,1080:0,86,255:40,0 chr2 8930010 . T . PASS END=8930017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 8930018 . A . PASS END=8930189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:31:0,86,1217:0,86,255:40,0 chr2 8931190 . C . PASS END=8931330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,112,1392:0,112,255:40,0 chr2 8931331 . C . PASS END=8931354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:43:0,96,1440:0,118,255:40,0 chr2 8933940 . T . PASS END=8933953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 8933954 . T . PASS END=8934114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1000:0,81,255:40,0 chr2 8934115 . T . PASS END=8934115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,947:0,35,255:23,0 chr2 8934116 . T . PASS END=8934117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:25,0 chr2 8936901 . C . PASS END=8936999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,137,255:40,0 chr2 8938332 . C . PASS END=8938430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:68:0,120,1800:0,200,255:40,0 chr2 8940525 . C . PASS END=8940525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 8940530 . C . PASS END=8940628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:93:44:0,93,1395:0,122,255:40,0 chr2 8943060 . C . PASS END=8943253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:44:0,99,1557:0,99,255:40,0 chr2 8943254 . A . PASS END=8943257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,108,1620:0,113,255:37,0 chr2 8946401 . A . PASS END=8946499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,111,1665:0,147,255:40,0 chr2 8952525 . C . PASS END=8952626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:70:0,120,1800:0,194,255:40,0 chr2 8953367 . C . PASS END=8953379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:48:0,119,1507:0,119,255:40,0 chr2 8953380 . C . PASS END=8953380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:68:56:0,68,1510:0,68,255:40,0 chr2 8953381 . T . PASS END=8953383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,131,255:40,0 chr2 8953384 . G . PASS END=8953384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,7:57:54:57:0,54,1427:0,54,255:40,0 chr2 8953385 . A . PASS END=8953385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,8:57:16:57:0,16,1430:0,16,255:40,0 chr2 8953386 . T . PASS END=8953393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,132,255:40,0 chr2 8953394 . A . PASS END=8953394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,7:60:27:60:0,27,1505:0,27,255:40,0 chr2 8953395 . T . PASS END=8953465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,99,1573:0,99,255:40,0 chr2 8957748 . C . PASS END=8957846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:52:0,120,1800:0,152,255:40,0 chr2 8958825 . C . PASS END=8958923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:39:0,100,1287:0,100,255:40,0 chr2 8967116 . C . PASS END=8967223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:50:0,120,1800:0,139,255:40,0 chr2 8998809 . T . PASS END=8998821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:94:46:0,94,1782:0,94,255:40,0 chr2 8998822 . G . PASS END=8999034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:45:0,119,1645:0,119,255:40,0 chr2 9000743 . C . PASS END=9000894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:60:0,120,1800:0,156,255:40,0 chr2 9002443 . T . PASS END=9002452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1142:0,99,255:33,0 chr2 9002720 . A . PASS END=9002729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:26,0 chr2 9002730 . G . PASS END=9002732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 9002733 . A . PASS END=9002733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr2 9002734 . A . PASS END=9002734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 9002735 . T . PASS END=9002737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:27:0,65,969:0,65,255:30,0 chr2 9002738 . C . PASS END=9002852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:31:0,88,1157:0,88,255:40,0 chr2 9004300 . C . PASS END=9004380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,3:108:99:85:0,120,1800:0,224,255:40,1 chr2 9008576 . C . PASS END=9008679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1440:0,116,255:40,0 chr2 9013238 . C . PASS END=9013430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:92:41:0,92,1395:0,92,255:40,0 chr2 9017160 . A . PASS END=9017328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:33:0,81,1215:0,99,255:40,0 chr2 9017329 . A . PASS END=9017340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,1078:0,60,255:26,0 chr2 9017341 . C . PASS END=9017343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 9022641 . C . PASS END=9022695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,153,255:40,0 chr2 9028148 . C . PASS END=9028203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,117,1755:0,125,255:40,0 chr2 9048751 . C . PASS END=9048846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:38:0,96,1377:0,96,255:40,1 chr2 9083316 . T . PASS END=9083393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:54:0,120,1800:0,124,255:40,0 chr2 9098626 . C . PASS END=9098771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:84:39:0,84,1260:0,117,255:40,0 chr2 9114488 . T . PASS END=9114502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr2 9114503 . T . PASS END=9114503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 9114504 . C . PASS END=9114513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,615:0,44,255:19,0 chr2 9114514 . C . PASS END=9114514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr2 9114515 . G . PASS END=9114519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 9114520 . A . PASS END=9114520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 9114521 . C . PASS END=9114539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,698:0,50,255:19,0 chr2 9114540 . A . PASS END=9114540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,443:0,7,255:13,0 chr2 9114541 . C . PASS END=9114564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,521:0,45,255:16,0 chr2 9143669 . C . PASS END=9143683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 9143684 . C . PASS END=9143707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 9143708 . C . PASS END=9143719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 9143720 . G . PASS END=9143722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 9143723 . C . PASS END=9143737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:8:0,14,270:0,14,255:6,0 chr2 9143738 . G . PASS END=9143741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 9143742 . A . PASS END=9143743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 9347234 . A . PASS END=9347239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,294:0,24,255:8,0 chr2 9347240 . G . PASS END=9347278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 9347279 . G . PASS END=9347283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:18,0 chr2 9347284 . C . PASS END=9347293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 9347294 . C . PASS END=9347306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 9347307 . G . PASS END=9347327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:22,0 chr2 9347328 . A . PASS END=9347328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:18,0 chr2 9347329 . G . PASS END=9347332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 9347333 . C . PASS END=9347381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,598:0,48,255:19,0 chr2 9347382 . T . PASS END=9347392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr2 9378022 . A . PASS END=9378054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,136,255:40,0 chr2 9378066 . A . PASS END=9378074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,144,255:40,0 chr2 9419446 . G . PASS END=9419448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:66:0,120,1800:0,185,255:40,0 chr2 9419449 . T . PASS END=9419518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:64:0,120,1800:0,159,255:40,0 chr2 9437429 . C . PASS END=9437574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:38:0,90,1418:0,90,255:40,0 chr2 9458653 . A . PASS END=9458660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 9458661 . T . PASS END=9458661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:31,0 chr2 9458662 . A . PASS END=9458727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:33:0,89,1217:0,89,255:40,0 chr2 9460417 . G . PASS END=9460466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,208,255:40,0 chr2 9463250 . A . PASS END=9463250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 9463251 . A . PASS END=9463254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:29,0 chr2 9463255 . A . PASS END=9463255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:26,0 chr2 9463256 . G . PASS END=9463258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 9463259 . A . PASS END=9463259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr2 9463260 . G . PASS END=9463263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 9463264 . A . PASS END=9463264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,915:0,57,255:25,0 chr2 9463265 . G . PASS END=9463268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1125:0,90,255:31,0 chr2 9463269 . A . PASS END=9463271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr2 9463272 . A . PASS END=9463379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1073:0,85,255:40,0 chr2 9467955 . T . PASS END=9468040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:86:0,120,1800:0,225,255:40,0 chr2 9474867 . T . PASS END=9474942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:43:0,112,1416:0,112,255:40,0 chr2 9475222 . A . PASS END=9475299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,4:72:99:60:0,120,1800:0,128,255:40,0 chr2 9475300 . C . PASS END=9475308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,178,255:40,0 chr2 9476165 . T . PASS END=9476173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:94:0,120,1800:0,236,255:40,0 chr2 9484661 . G . PASS END=9484764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:93:37:0,93,1355:0,95,255:40,0 chr2 9484860 . G . PASS END=9484929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,120,1800:0,138,255:40,0 chr2 9490937 . G . PASS END=9490979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,133,255:40,0 chr2 9490980 . T . PASS END=9491016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,117,1621:0,119,255:40,0 chr2 9491017 . C T, 174.57 PASS DP=43;MQ=249.45;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,20,0:0,23,0:125:212,128,0,1534,128,1534:255,129,0:0,0:1.7457e+02,1.2457e+02,0.0000e+00,4.5000e+02,1.5934e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,24:0,0,22,21 chr2 9491018 . A . PASS END=9491024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,120,1506:0,120,255:40,0 chr2 9496176 . A . PASS END=9496224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,108,1620:0,114,255:40,0 chr2 9496308 . A . PASS END=9496308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:65:46:0,65,1217:0,65,255:37,0 chr2 9496309 . T . PASS END=9496309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,99,1570:0,99,255:38,0 chr2 9496310 . G . PASS END=9496310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:60:47:0,60,1459:0,60,255:39,0 chr2 9496311 . G . PASS END=9496328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,108,1654:0,108,255:40,0 chr2 9496329 . T . PASS END=9496465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:31:0,81,1215:0,87,255:40,0 chr2 9496466 . G . PASS END=9496468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 9496469 . C . PASS END=9496469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:25,0 chr2 9496470 . G . PASS END=9496474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr2 9498885 . A . PASS END=9499014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:32:0,92,1156:0,92,255:40,0 chr2 9499015 . G . PASS END=9499015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1272:0,62,255:34,0 chr2 9499016 . C . PASS END=9499017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1334:0,100,255:37,0 chr2 9499018 . G . PASS END=9499018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:36,0 chr2 9508554 . C . PASS END=9508626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,99,1485:0,110,255:40,0 chr2 9508627 . A . PASS END=9508627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1380:0,68,255:32,0 chr2 9508628 . A . PASS END=9508637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,99,255:32,0 chr2 9508638 . G . PASS END=9508638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 9508639 . G . PASS END=9508642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr2 9508643 . C . PASS END=9508648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,71,255:23,0 chr2 9514884 . G . PASS END=9514887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 9514888 . G . PASS END=9514888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 9514889 . C . PASS END=9514916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:32:0,83,1164:0,83,255:40,0 chr2 9514917 . C T, 48.13 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=2.326;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,17,0:0.425,0.000:40:15,11,0:8,6,0:47:83,0,50,608,823,1431:255,0,255:23,0:4.8133e+01,8.8531e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,12,5:12,11,10,7 chr2 9514918 . A . PASS END=9514954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,107,1452:0,107,255:40,0 chr2 9514955 . A . PASS END=9514993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,99,1621:0,99,255:40,1 chr2 9514994 . C . PASS END=9514994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1614:0,69,255:40,0 chr2 9514995 . G . PASS END=9515020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:43:0,80,1455:0,80,255:40,0 chr2 9515021 . C . PASS END=9515021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1510:0,72,255:33,0 chr2 9515022 . T . PASS END=9515029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1443:0,104,255:36,0 chr2 9515030 . A . PASS END=9515030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:33,0 chr2 9515031 . T . PASS END=9515054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1097:0,82,255:33,0 chr2 9515055 . C . PASS END=9515058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 9515059 . C . PASS END=9515060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 9515061 . G . PASS END=9515065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1072:0,76,255:27,0 chr2 9515066 . A . PASS END=9515066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,897:0,59,255:23,0 chr2 9515067 . C . PASS END=9515069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr2 9515070 . A . PASS END=9515070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:31:0,51,765:0,77,255:16,0 chr2 9515071 . C . PASS END=9515071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,939:0,33,255:15,0 chr2 9515072 . A . PASS END=9515073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:32:0,54,810:0,80,255:18,0 chr2 9517037 . G . PASS END=9517051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr2 9517052 . G . PASS END=9517089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1208:0,83,255:33,0 chr2 9517090 . T . PASS END=9517090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 9517091 . C . PASS END=9517092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr2 9517093 . T . PASS END=9517093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 9517094 . C . PASS END=9517105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 9517106 . T . PASS END=9517106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr2 9517107 . T . PASS END=9517107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 9517108 . T . PASS END=9517108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 9517109 . T . PASS END=9517109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 9517110 . T . PASS END=9517122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr2 9519073 . T . PASS END=9519082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:23,0 chr2 9519083 . G . PASS END=9519083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 9519084 . A . PASS END=9519086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 9519087 . A . PASS END=9519087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 9519088 . A . PASS END=9519098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:26,0 chr2 9519099 . A . PASS END=9519099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:23,0 chr2 9519100 . A . PASS END=9519123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1094:0,84,255:31,0 chr2 9519124 . C . PASS END=9519124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 9519125 . T . PASS END=9519147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1072:0,90,255:31,0 chr2 9519148 . C . PASS END=9519148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:28,0 chr2 9519149 . C . PASS END=9519152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 9519153 . A . PASS END=9519153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 9519154 . G . PASS END=9519163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr2 9519164 . C . PASS END=9519164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr2 9519165 . G . PASS END=9519168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 9519169 . G . PASS END=9519169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr2 9519170 . A . PASS END=9519176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,972:0,84,255:28,0 chr2 9519177 . C . PASS END=9519188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr2 9520870 . C . PASS END=9520919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1049:0,80,255:32,0 chr2 9520920 . G . PASS END=9520920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr2 9520921 . A . PASS END=9520930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 9520931 . G . PASS END=9520937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 9525374 . C . PASS END=9525487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,125,255:40,0 chr2 9528423 . C . PASS END=9528426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 9528427 . G . PASS END=9528427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 9528428 . T . PASS END=9528428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 9528429 . C . PASS END=9528430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 9528431 . C . PASS END=9528432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 9528433 . A . PASS END=9528441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 9528442 . A . PASS END=9528443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 9528444 . G . PASS END=9528462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr2 9528463 . A . PASS END=9528463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 9528464 . C . PASS END=9528464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 9528465 . C . PASS END=9528467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 9528468 . C . PASS END=9528470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr2 9528471 . G . PASS END=9528471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:29,0 chr2 9528472 . G . PASS END=9528475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 9528476 . C . PASS END=9528476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 9528477 . A . PASS END=9528478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 9528479 . C . PASS END=9528479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr2 9528480 . C . PASS END=9528498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1234:0,91,255:36,0 chr2 9528499 . T . PASS END=9528535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1167:0,81,255:38,0 chr2 9528536 . G C, 47.25 PASS DP=37;MQ=250.00;MQRankSum=5.089;ReadPosRankSum=1.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,15,0:0.405,0.000:37:13,9,0:9,6,0:46:82,0,50,520,750,1270:255,0,255:21,0:4.7245e+01,1.0355e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,6,9:9,13,10,5 chr2 9528537 . A . PASS END=9528550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:34,0 chr2 9528551 . C . PASS END=9528551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:32,0 chr2 9528552 . A . PASS END=9528571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,969:0,82,255:32,0 chr2 9528572 . T . PASS END=9528573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,82,255:26,0 chr2 9528574 . A . PASS END=9528575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 9528576 . A . PASS END=9528576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 9528577 . C . PASS END=9528581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:27,0 chr2 9528582 . G . PASS END=9528596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr2 9528597 . G . PASS END=9528597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 9528598 . G . PASS END=9528604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 9528605 . A . PASS END=9528608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,706:0,46,255:19,0 chr2 9528609 . C . PASS END=9528616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:20,0 chr2 9528617 . G . PASS END=9528629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,50,255:19,0 chr2 9528630 . A . PASS END=9528630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,615:0,30,255:13,0 chr2 9528631 . G . PASS END=9528635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,46,255:14,0 chr2 9528636 . A . PASS END=9528636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:12,0 chr2 9528637 . C . PASS END=9528640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 9528641 . C . PASS END=9528642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr2 9528643 . C . PASS END=9528652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 9528653 . T . PASS END=9528653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:13,0 chr2 9528654 . C . PASS END=9528654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 9528655 . C . PASS END=9528655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 9528656 . T . PASS END=9528656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 9528657 . C . PASS END=9528673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr2 9528674 . A . PASS END=9528675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,405:0,22,255:9,0 chr2 9529854 . G . PASS END=9529869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,654:0,48,255:19,0 chr2 9529870 . G . PASS END=9529892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr2 9529893 . C . PASS END=9530308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,986:0,81,255:40,2 chr2 9531191 . T . PASS END=9531197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,907:0,75,255:25,0 chr2 9531198 . A . PASS END=9531198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr2 9531199 . G . PASS END=9531205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:26,0 chr2 9531206 . C . PASS END=9531298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:30:0,90,963:0,90,255:40,0 chr2 9531299 . T . PASS END=9531299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 9531300 . G . PASS END=9531308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:36,0 chr2 9531309 . T . PASS END=9531309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:31,0 chr2 9531310 . C . PASS END=9531315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:31,0 chr2 9531316 . A . PASS END=9531325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,82,255:25,0 chr2 9533611 . A . PASS END=9533612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 9533613 . C . PASS END=9533613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 9533614 . C . PASS END=9533614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 9533615 . C . PASS END=9533646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,485:0,48,255:19,0 chr2 9533647 . A . PASS END=9533649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr2 9533650 . C . PASS END=9533650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 9533651 . G . PASS END=9533654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 9533655 . A . PASS END=9533656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:43:20:0,43,623:0,43,255:22,0 chr2 9533657 . C . PASS END=9533661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr2 9533662 . T . PASS END=9533662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr2 9533663 . G . PASS END=9533667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr2 9533668 . C . PASS END=9533668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 9533669 . C . PASS END=9533670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 9533671 . T . PASS END=9533671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 9533672 . G . PASS END=9533678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,833:0,72,255:24,0 chr2 9533679 . C . PASS END=9533679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 9533680 . C . PASS END=9533696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,840:0,72,255:24,0 chr2 9533697 . C . PASS END=9533697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 9533698 . C . PASS END=9533700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 9533701 . G . PASS END=9533701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 9533702 . G . PASS END=9533707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 9533708 . A . PASS END=9533717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,55,255:19,0 chr2 9533718 . C . PASS END=9533718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 9533719 . C . PASS END=9533737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,631:0,44,255:18,0 chr2 9533738 . G . PASS END=9533738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 9533739 . C . PASS END=9533740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 9533741 . G . PASS END=9533741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr2 9533742 . C . PASS END=9533769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr2 9533770 . C . PASS END=9533776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr2 9540152 . G . PASS END=9540201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:46:0,98,1791:0,98,255:40,0 chr2 9540871 . T . PASS END=9540937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,96,255:40,0 chr2 9540938 . C . PASS END=9540959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:25:0,69,937:0,71,255:25,0 chr2 9541403 . A . PASS END=9541410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,668:0,43,255:19,0 chr2 9541411 . G . PASS END=9541432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr2 9541433 . C . PASS END=9541504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1017:0,84,255:35,0 chr2 9541505 . G . PASS END=9541518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:24,0 chr2 9541519 . G . PASS END=9541525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 9543382 . A . PASS END=9543456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,111,1722:0,111,255:40,0 chr2 9546963 . T . PASS END=9547034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,120,1800:0,124,255:40,0 chr2 9547554 . C . PASS END=9547727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1202:0,81,255:40,0 chr2 9548242 . A . PASS END=9548334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:64:0,120,1800:0,188,255:40,0 chr2 9552362 . T . PASS END=9552378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:96:64:0,96,1440:0,132,255:36,0 chr2 9552379 . C T, 50.00 PASS DP=68;MQ=249.67;MQRankSum=6.177;ReadPosRankSum=0.796;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,33,0:0.493,0.000:67:15,16,0:19,17,0:47:85,0,47,185,185,185:255,0,255:26,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,19,24,9:18,16,15,18 chr2 9552380 . G . PASS END=9552382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:96:68:0,96,1440:0,148,255:32,1 chr2 9552383 . AT A,ATT, 50.00 PASS DP=68;MQ=249.67;MQRankSum=6.231;ReadPosRankSum=0.610;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:31,4,32,0:0.060,0.478,0.000:67:15,1,15,0:16,3,17,0:47:62,424,297,0,238,47,524,524,524,524:255,0,255:31,45:5.0000e+01,4.2434e+02,3.0014e+02,8.6978e-05,2.5014e+02,5.0000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,12.00,15.01,12.00,24.00,15.01,34.77,46.77,46.77,37.78:13,18,24,12:15,16,16,20 chr2 9552384 . T . LowGQ END=9552384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:34,35:69:0:69:0,0,0:255,0,255:40,5 chr2 9552385 . T . PASS END=9552427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:63:0,114,1800:0,114,255:40,1 chr2 9552428 . T . PASS END=9552534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:40:0,108,1620:0,110,255:40,0 chr2 9554307 . C . PASS END=9554311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1096:0,90,255:30,0 chr2 9554312 . C . PASS END=9554312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 9554313 . T . PASS END=9554314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 9554315 . T . PASS END=9554315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 9554316 . T . PASS END=9554316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 9554317 . G . PASS END=9554317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 9554318 . G . PASS END=9554321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 9554322 . A . PASS END=9554322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 9554323 . A . PASS END=9554357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1125:0,87,255:31,0 chr2 9554358 . A . PASS END=9554358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 9554359 . A . PASS END=9554360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr2 9554361 . G . PASS END=9554361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 9554362 . A . PASS END=9554365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 9554366 . C . PASS END=9554366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 9554367 . C . PASS END=9554383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1156:0,90,255:31,0 chr2 9554384 . G . PASS END=9554384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 9554385 . A . PASS END=9554385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 9558755 . C . PASS END=9558826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,141,255:40,0 chr2 9563502 . C . PASS END=9563513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 9563514 . G . PASS END=9563517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr2 9563518 . C . PASS END=9563520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 9563903 . A . PASS END=9563903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 9563904 . T . PASS END=9563905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 9563906 . T . PASS END=9563916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 9563917 . T . PASS END=9563917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 9563918 . G . PASS END=9563948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:30:0,86,1149:0,86,255:33,0 chr2 9563949 . C . PASS END=9563952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,77,255:24,0 chr2 9566690 . A . PASS END=9566751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,108,1620:0,128,255:40,0 chr2 9568894 . T . PASS END=9568957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,200,255:40,0 chr2 9570052 . C . PASS END=9570149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:35:0,99,1485:0,105,255:40,0 chr2 9570881 . T . PASS END=9570882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 9570883 . T . PASS END=9570887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 9570888 . T . PASS END=9570888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 9570889 . T . PASS END=9570894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,901:0,72,255:25,0 chr2 9570895 . A . PASS END=9571009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:27:0,81,1047:0,81,255:40,0 chr2 9572640 . T . PASS END=9572649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1086:0,87,255:33,0 chr2 9572650 . G . PASS END=9572650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:32,0 chr2 9572651 . C . PASS END=9572817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:34:0,96,1440:0,102,255:40,0 chr2 9574000 . C . PASS END=9574089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:62:0,120,1800:0,170,255:40,0 chr2 9576340 . G . PASS END=9576354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 9576355 . A . PASS END=9576362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1277:0,95,255:37,0 chr2 9576363 . C . PASS END=9576363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr2 9576364 . C . PASS END=9576429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:37:0,90,1250:0,90,255:39,0 chr2 9576430 . G . PASS END=9576430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr2 9576431 . G . PASS END=9576455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:36,0 chr2 9576456 . T . PASS END=9576456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 9576457 . C . PASS END=9576460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 9576461 . G . PASS END=9576461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1032:0,54,255:27,0 chr2 9576462 . A . PASS END=9576462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr2 9576463 . A . PASS END=9576463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1030:0,35,255:21,0 chr2 9576464 . G . PASS END=9576466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 9576467 . C . PASS END=9576467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:21,0 chr2 9576468 . T . PASS END=9576476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,74,255:23,0 chr2 9576477 . G . PASS END=9576477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 9576478 . C . PASS END=9576484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 9576485 . T . PASS END=9576490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 9580620 . A . PASS END=9580795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:41:0,102,1530:0,112,255:40,0 chr2 9581947 . A . PASS END=9582105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:86:36:0,86,1346:0,86,255:40,0 chr2 9583644 . C . PASS END=9583779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:37:0,94,1329:0,94,255:40,0 chr2 9583780 . C . PASS END=9583790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:44:0,81,1215:0,119,255:40,0 chr2 9588327 . A . PASS END=9588332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr2 9588333 . G . PASS END=9588336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 9588337 . A . PASS END=9588337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 9588338 . T . PASS END=9588342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 9588343 . A . PASS END=9588343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1054:0,79,255:30,0 chr2 9588344 . A . PASS END=9588345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1105:0,93,255:31,0 chr2 9588346 . A . PASS END=9588346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 9588347 . G . PASS END=9588479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:97:35:0,97,1319:0,97,255:40,0 chr2 9593042 . G . PASS END=9593149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,99,1446:0,104,255:40,0 chr2 9593150 . A . PASS END=9593150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1502:0,74,255:31,0 chr2 9595788 . A . PASS END=9595886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,117,1800:0,117,255:40,0 chr2 9597062 . G . PASS END=9597156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:94:44:0,94,1598:0,94,255:40,0 chr2 9599660 . T . PASS END=9599691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:66:0,120,1800:0,161,255:40,0 chr2 9599692 . A . PASS END=9599730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:88:56:0,88,1800:0,88,255:40,0 chr2 9599731 . T . LowGQ END=9599731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,8:56:0:56:0,0,1462:46,0,255:40,0 chr2 9599732 . C . PASS END=9599738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,108,1620:0,129,255:40,0 chr2 9599739 . T . LowGQ END=9599739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,9:55:0:55:0,0,1484:6,0,255:36,0 chr2 9599740 . A . PASS END=9599741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,108,1620:0,149,255:36,0 chr2 9599742 . G . PASS END=9599742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:43:55:0,43,1546:0,43,255:35,0 chr2 9599743 . A . PASS END=9599746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:87:55:0,87,1305:0,93,255:35,0 chr2 9599747 . G . PASS END=9599747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:34:55:0,34,1470:0,34,255:27,0 chr2 9607836 . G . PASS END=9607861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:85:45:0,85,1366:0,85,255:40,1 chr2 9607862 . T . LowGQ END=9607862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,10:58:0:58:0,0,1453:83,0,255:40,1 chr2 9607863 . T . PASS END=9607905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:51:0,115,1712:0,115,255:40,0 chr2 9611472 . G . PASS END=9611568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:34:0,93,1156:0,95,255:40,0 chr2 9613045 . A . PASS END=9613146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:37:0,84,1260:0,104,255:40,0 chr2 9614696 . A . PASS END=9614696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 9614697 . T . PASS END=9614702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,660:0,48,255:18,0 chr2 9614703 . T . PASS END=9614703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:17,0 chr2 9614704 . G . PASS END=9614710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr2 9614711 . G . PASS END=9614718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr2 9614719 . C . PASS END=9614726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 9614727 . G . PASS END=9614728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 9614729 . G . PASS END=9614729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 9614730 . C . PASS END=9614733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 9614734 . G . PASS END=9614735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 9614736 . T . PASS END=9614736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 9614737 . C . PASS END=9614745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,884:0,69,255:23,0 chr2 9614746 . C . PASS END=9614746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 9614747 . T . PASS END=9614771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr2 9614772 . C . PASS END=9614776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,812:0,53,255:19,0 chr2 9615341 . A . PASS END=9615346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 9616116 . T . PASS END=9616168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,126,255:40,0 chr2 9618145 . A . PASS END=9618145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,917:0,32,255:27,0 chr2 9618146 . T . PASS END=9618146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 9618147 . G . PASS END=9618151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:32,0 chr2 9618152 . A . PASS END=9618152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 9618153 . T . PASS END=9618153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,956:0,48,255:30,0 chr2 9618154 . T . PASS END=9618167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:32:0,88,1098:0,88,255:34,0 chr2 9618168 . G . PASS END=9618168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 9618169 . A . PASS END=9618170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:34,0 chr2 9618171 . T . PASS END=9618499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:35:0,81,1274:0,81,255:40,0 chr2 9621415 . A . PASS END=9621560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:31:0,84,1251:0,92,255:40,0 chr2 9621561 . C . PASS END=9621566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,900:0,80,255:24,0 chr2 9621567 . A . PASS END=9621576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:22:0,51,765:0,66,255:18,0 chr2 9624561 . G . PASS END=9624679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1083:0,88,255:40,0 chr2 9628276 . G . PASS END=9628458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:93:42:0,93,1395:0,116,255:40,0 chr2 9630306 . T . PASS END=9630311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr2 9630312 . C . PASS END=9630314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 9630315 . T . PASS END=9630315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 9630316 . G . PASS END=9630329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1058:0,90,255:31,0 chr2 9630330 . A . PASS END=9630330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 9630331 . A . PASS END=9630339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1127:0,93,255:31,0 chr2 9630340 . T . PASS END=9630340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 9630341 . G . PASS END=9630360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1147:0,80,255:34,0 chr2 9630361 . G . PASS END=9630362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:30,0 chr2 9630363 . A . PASS END=9630371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:32,0 chr2 9630372 . A . PASS END=9630372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr2 9630373 . C . PASS END=9630379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 9630380 . T . PASS END=9630380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 9630381 . G . PASS END=9630384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 9630385 . G . PASS END=9630385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 9630386 . G . PASS END=9630387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 9630388 . T . PASS END=9630389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 9630390 . G . PASS END=9630408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,89,255:30,0 chr2 9630409 . G . PASS END=9630410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 9630411 . C . PASS END=9630411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 9630412 . T . PASS END=9630412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1005:0,54,255:27,0 chr2 9630413 . T . PASS END=9630413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 9630414 . G . PASS END=9630418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 9630419 . C . PASS END=9630441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 9630442 . T . PASS END=9630444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 9630445 . T . PASS END=9630459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:32,0 chr2 9630460 . T . PASS END=9630460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:30,0 chr2 9630461 . C . PASS END=9630647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:35:0,89,1302:0,89,255:40,0 chr2 9631230 . A . PASS END=9631280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:88:0,120,1800:0,231,255:40,0 chr2 9633027 . C . PASS END=9633099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,143,255:40,0 chr2 9633100 . T . PASS END=9633115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,167,255:40,0 chr2 9633871 . C . PASS END=9633872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 9633876 . C . PASS END=9633954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,136,255:40,0 chr2 9634759 . T . PASS END=9634759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 9634766 . A . PASS END=9634818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:30:0,82,989:0,82,255:40,0 chr2 9634819 . T . PASS END=9634855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:47:0,95,1731:0,95,255:40,0 chr2 9634856 . A G, 188.00 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,22,0:0,25,0:138:226,141,0,1793,141,1793:255,141,0:0,0:1.8800e+02,1.3800e+02,0.0000e+00,4.5000e+02,1.7277e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,26:0,0,22,25 chr2 9634857 . G . PASS END=9634893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1233:0,84,255:40,0 chr2 9634894 . T . PASS END=9634896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1172:0,96,255:32,0 chr2 9637243 . C . PASS END=9637365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1296:0,81,255:40,0 chr2 9637366 . C . PASS END=9637377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1440:0,108,255:34,0 chr2 9642302 . C . PASS END=9642398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,81,255:40,0 chr2 9642399 . C . PASS END=9642405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:27:0,62,1108:0,62,255:26,0 chr2 9645295 . C . PASS END=9645295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 9645296 . T . PASS END=9645296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr2 9645297 . G . PASS END=9645466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:34:0,84,1209:0,86,255:40,0 chr2 9645467 . T . PASS END=9645474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,74,255:26,0 chr2 9645475 . T . PASS END=9645475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:20,0 chr2 9645476 . T . PASS END=9645489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,748:0,66,255:24,0 chr2 9645490 . A . PASS END=9645494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr2 9645497 . T . PASS END=9645497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 9650108 . C . PASS END=9650122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:29,0 chr2 9650123 . A . PASS END=9650123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 9650124 . T . PASS END=9650127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 9650128 . C . PASS END=9650128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 9650129 . A . PASS END=9650260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1186:0,84,255:40,0 chr2 9650263 . T . PASS END=9650263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 9658030 . C . PASS END=9658118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,0:129:99:112:0,120,1800:0,255,255:40,0 chr2 9658232 . C . PASS END=9658338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,127,255:40,1 chr2 9658339 . A . PASS END=9658366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:96:44:0,96,1440:0,108,255:40,0 chr2 9658367 . A . PASS END=9658367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1273:0,65,255:30,0 chr2 9658368 . G . PASS END=9658374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:43:0,81,1215:0,82,255:32,0 chr2 9658375 . T . PASS END=9658375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:32:42:0,32,1244:0,32,255:24,0 chr2 9658376 . G . PASS END=9658376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr2 9661332 . C . PASS END=9661445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:55:0,120,1800:0,165,255:40,0 chr2 9662553 . C . PASS END=9662567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:78:0,120,1800:0,227,255:40,0 chr2 9663378 . C . PASS END=9663477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:45:0,119,1643:0,119,255:40,0 chr2 9666240 . T . PASS END=9666373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,99,1504:0,99,255:40,0 chr2 9667915 . C . PASS END=9668083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:92:34:0,92,1227:0,92,255:40,0 chr2 9669727 . C . PASS END=9669729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:29,0 chr2 9669730 . A . PASS END=9669730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 9669731 . A . PASS END=9669804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:29:0,87,1092:0,87,255:37,0 chr2 9669805 . A . PASS END=9669805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:32,0 chr2 9669806 . A . PASS END=9669818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:35:0,80,1155:0,80,255:34,0 chr2 9669819 . G . PASS END=9669819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:32,0 chr2 9669820 . C . PASS END=9669820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1319:0,105,255:35,0 chr2 9669821 . C . PASS END=9669821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:31,0 chr2 9669822 . G . PASS END=9669824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:33,0 chr2 9669825 . C . PASS END=9669825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1153:0,55,255:28,0 chr2 9669826 . G . PASS END=9669829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 9669830 . T . PASS END=9669837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:30:0,63,945:0,83,255:25,0 chr2 9669838 . G . PASS END=9669838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:20,0 chr2 9669839 . C . PASS END=9669843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:22,0 chr2 9669844 . A . PASS END=9669846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,61,255:18,0 chr2 9675963 . C . PASS END=9676051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,116,1568:0,116,255:40,0 chr2 9676827 . C . PASS END=9676957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:94:46:0,94,1620:0,94,255:40,0 chr2 9683282 . C . PASS END=9683414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:89:35:0,89,1214:0,89,255:40,0 chr2 9683825 . T . PASS END=9683828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,207,255:40,0 chr2 9695638 . C . PASS END=9695651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,914:0,62,255:26,0 chr2 9695652 . G . PASS END=9695657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 9695658 . A . PASS END=9695659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 9695660 . G . PASS END=9695660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 9695661 . C . PASS END=9695720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,783:0,65,255:26,0 chr2 9695721 . A . PASS END=9695734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:19,0 chr2 9725415 . T . PASS END=9725474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,120,1800:0,144,255:40,0 chr2 9727543 . T . PASS END=9727638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1373:0,95,255:40,0 chr2 9728294 . C . PASS END=9728303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1217:0,86,255:36,0 chr2 9728304 . A . PASS END=9728304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 9728305 . G . PASS END=9728457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,99,1452:0,99,255:40,0 chr2 9731521 . G . PASS END=9731644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:39:0,104,1480:0,104,255:40,0 chr2 9770288 . C . PASS END=9770306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 9770307 . G . PASS END=9770323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr2 9770324 . C . PASS END=9770335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:13,0 chr2 9770336 . A . PASS END=9770336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 9770337 . T . PASS END=9770338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 9770339 . G . PASS END=9770343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,576:0,45,255:16,0 chr2 9770344 . T . PASS END=9770344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 9770345 . A . PASS END=9770352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:18,0 chr2 9770353 . G . PASS END=9770353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 9770354 . C . PASS END=9770359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr2 9770360 . C . PASS END=9770360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr2 9770361 . T . PASS END=9770370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 9770371 . T . PASS END=9770371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 9770372 . G . PASS END=9770376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 9770377 . T . PASS END=9770377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr2 9770378 . C . PASS END=9770379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 9770380 . T . PASS END=9770380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 9770381 . C . PASS END=9770381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 9770382 . T . PASS END=9770382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 9770383 . G . PASS END=9770396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr2 9770397 . A . PASS END=9770397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr2 9770398 . T . PASS END=9770400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 9770401 . C . PASS END=9770411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 9770412 . G . PASS END=9770412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 9770413 . A . PASS END=9770413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 9770414 . C . PASS END=9770416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 9770417 . G . PASS END=9770430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,480:0,39,255:13,0 chr2 9770431 . C . PASS END=9770432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 9770433 . T . PASS END=9770462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 9770463 . T . PASS END=9770465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr2 9770466 . T . PASS END=9770472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 9770473 . A . PASS END=9770488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 9770489 . C . PASS END=9770489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 9770490 . T . PASS END=9770567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:8,0 chr2 9770568 . T . PASS END=9770579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,249:5,0 chr2 9770580 . A . PASS END=9770581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr2 9789437 . T . PASS END=9789440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr2 9789441 . T . PASS END=9789441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 9789442 . T . PASS END=9789442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr2 9789443 . G . PASS END=9789447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 9789448 . G . PASS END=9789448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr2 9789449 . G . PASS END=9789453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:16,0 chr2 9789454 . T . PASS END=9789454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 9789455 . G . PASS END=9789517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:18,0 chr2 9983671 . A . PASS END=9983682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 9983683 . G . PASS END=9983683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 9983684 . A . PASS END=9983685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr2 9983686 . G T, 47.55 PASS DP=23;MQ=250.00;MQRankSum=3.937;ReadPosRankSum=0.220;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,9,0:0.391,0.000:23:8,2,0:6,7,0:46:82,0,50,293,472,765:235,0,255:14,0:4.7547e+01,9.8109e-05,5.3000e+01,2.9285e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,4,5:3,11,7,2 chr2 9983687 . C . PASS END=9983687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 9983688 . G . PASS END=9983688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr2 9984589 . A . PASS END=9984597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,114,1710:0,129,255:40,0 chr2 9984598 . G A, 179.42 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,28,0:0,16,0:129:217,132,0,1679,132,1679:255,132,0:0,0:1.7942e+02,1.2942e+02,0.0000e+00,4.5000e+02,1.6419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,27:0,0,21,23 chr2 9984599 . C . PASS END=9984606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1665:0,117,255:38,0 chr2 9985349 . G . PASS END=9985447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,115,1440:0,115,255:40,0 chr2 9986186 . T . PASS END=9986199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:71:0,120,1800:0,161,255:40,0 chr2 9986200 . C . PASS END=9986242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:70:0,120,1800:0,161,255:40,0 chr2 9989502 . A . PASS END=9989527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,137,255:40,0 chr2 9989528 . T . PASS END=9989569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,184,255:40,0 chr2 9989570 . T . LowGQ END=9989571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,8:63:0:63:0,0,1631:38,0,255:40,13 chr2 9989572 . A . PASS END=9989589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,150,255:40,0 chr2 9991670 . A . PASS END=9991767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:68:0,120,1800:0,188,255:40,0 chr2 9994455 . A . PASS END=9994550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,105,1575:0,132,255:40,0 chr2 10008405 . G . PASS END=10008416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:19:0,44,704:0,44,255:19,0 chr2 10008417 . A . PASS END=10008418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 10008419 . T . PASS END=10008419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 10008420 . C . PASS END=10008423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 10008424 . G . PASS END=10008424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 10008425 . T . PASS END=10008435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:25,0 chr2 10008436 . G . PASS END=10008442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 10008443 . T . PASS END=10008443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 10008444 . G . PASS END=10008444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 10008445 . A . PASS END=10008445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 10008446 . G . PASS END=10008531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1072:0,83,255:34,0 chr2 10008532 . T . PASS END=10008532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 10008533 . C . PASS END=10008540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 10008541 . G . PASS END=10008552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:23,0 chr2 10008553 . A . PASS END=10008553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 10008554 . A . PASS END=10008556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,945:0,62,255:22,0 chr2 10008557 . A . PASS END=10008558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 10015994 . A . PASS END=10015995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1017:0,62,255:29,0 chr2 10015996 . A . PASS END=10016147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:31:0,86,1074:0,86,255:40,0 chr2 10022835 . G . PASS END=10022934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:59:0,120,1800:0,160,255:40,0 chr2 10044988 . T . PASS END=10045013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,142,255:40,0 chr2 10045014 . C T, 244.66 PASS DP=66;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,66,0:1.000,0.000:66:0,30,0:0,36,0:195:282,198,0,382,382,382:255,199,0:0,0:2.4466e+02,1.9466e+02,0.0000e+00,3.7943e+02,4.1420e+02,3.8244e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,33,33:0,0,29,37:10045014 chr2 10045015 . A . PASS END=10045023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,160,255:40,0 chr2 10045024 . G A, 249.58 PASS DP=69;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,69,0:1.000,0.000:69:0,31,0:0,38,0:200:287,203,0,387,387,387:255,207,0:0,0:2.4958e+02,1.9958e+02,0.0000e+00,3.8435e+02,4.1911e+02,3.8736e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,35,34:0,0,29,40:10045014 chr2 10045025 . T . PASS END=10045063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:70:0,120,1800:0,180,255:40,0 chr2 10045064 . A . PASS END=10045109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:67:0,120,1800:0,146,255:40,0 chr2 10045110 . A . PASS END=10045135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,117,1755:0,144,255:40,0 chr2 10050865 . A . PASS END=10050909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:49:0,120,1800:0,131,255:40,0 chr2 10050910 . T . PASS END=10050946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:70:0,120,1800:0,189,255:40,0 chr2 10050947 . T C, 50.00 PASS DP=77;MQ=250.00;MQRankSum=7.445;ReadPosRankSum=3.757;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:37,38,0:0.507,0.000:75:13,20,0:24,18,0:48:85,0,50,1353,1242,2595:255,0,255:34,0:5.0000e+01,6.5233e-05,5.2974e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,23,19,19:18,19,19,19:10050947 chr2 10050948 . A . PASS END=10050959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,200,255:40,0 chr2 10050960 . A G, 50.00 PASS DP=74;MQ=250.00;MQRankSum=7.292;ReadPosRankSum=5.535;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:36,36,0:0.500,0.000:72:13,18,0:23,18,0:48:85,0,50,1250,1201,2452:255,0,255:31,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,31,17,19:20,16,19,17:10050947 chr2 10050961 . C . PASS END=10050997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:63:0,120,1800:0,129,255:40,0 chr2 10050998 . G . PASS END=10051015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,142,255:40,0 chr2 10051016 . C . PASS END=10051042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,150,255:40,0 chr2 10051640 . G . PASS END=10051686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,1:121:99:105:0,120,1800:0,255,255:40,0 chr2 10053288 . A . PASS END=10053374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:78:0,120,1800:0,198,255:40,0 chr2 10053375 . C . PASS END=10053411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:79:0,120,1800:0,235,255:40,0 chr2 10053412 . C T, 50.00 PASS DP=79;MQ=250.00;MQRankSum=7.614;ReadPosRankSum=2.446;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,43,0:0.544,0.000:79:25,23,0:11,20,0:48:85,0,49,1447,1284,2732:255,0,255:34,0:5.0000e+01,6.8339e-05,5.2401e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,26,14,29:15,21,22,21 chr2 10053413 . T . PASS END=10053442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,188,255:40,0 chr2 10059170 . G . PASS END=10059240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,130,255:40,0 chr2 10059727 . A . PASS END=10059732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1291:0,82,255:39,0 chr2 10059733 . T . PASS END=10059737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1429:0,106,255:40,0 chr2 10059738 . A . PASS END=10059738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1403:0,71,255:37,0 chr2 10059739 . A . PASS END=10059769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,108,1493:0,108,255:40,0 chr2 10059770 . G T, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.532;ReadPosRankSum=4.012;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,29,0:0.500,0.000:58:14,19,0:15,10,0:48:85,0,50,998,1037,2035:255,0,255:28,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,10,19:11,18,16,13 chr2 10059771 . T . PASS END=10059843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,121,255:40,1 chr2 10059844 . C T, 50.00 PASS DP=61;MQ=250.00;MQRankSum=6.694;ReadPosRankSum=5.798;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,32,0:0.525,0.000:61:17,13,0:12,19,0:48:85,0,50,1079,1037,2115:255,0,255:28,0:5.0000e+01,6.6010e-05,5.2851e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,19,12,20:12,17,13,19 chr2 10059845 . G . PASS END=10059881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,137,255:40,0 chr2 10059882 . G . PASS END=10059948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1215:0,87,255:40,0 chr2 10059949 . G . PASS END=10059949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 10073912 . C . PASS END=10074113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:89:32:0,89,1188:0,89,255:40,0 chr2 10091963 . A . PASS END=10091965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 10091966 . A . PASS END=10091966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 10091967 . C . PASS END=10091982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr2 10093161 . A . PASS END=10093189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1109:0,90,255:33,0 chr2 10095044 . C . PASS END=10095053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,754:0,63,255:25,0 chr2 10095054 . G . PASS END=10095221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1189:0,89,255:40,0 chr2 10095222 . T . PASS END=10095222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:26,0 chr2 10095223 . A . PASS END=10095227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 10095228 . A . PASS END=10095228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 10095229 . A . PASS END=10095230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 10098915 . G . PASS END=10098989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1715:0,120,255:40,0 chr2 10101175 . A . PASS END=10101452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1147:0,80,255:40,0 chr2 10101453 . T . PASS END=10101453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 10101454 . C . PASS END=10101492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,87,255:37,0 chr2 10101493 . T . PASS END=10101493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr2 10101494 . C . PASS END=10101539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,92,255:36,0 chr2 10101540 . A . PASS END=10101557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,939:0,67,255:25,0 chr2 10101558 . T . PASS END=10101558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:19,0 chr2 10101559 . T . PASS END=10101559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 10101560 . C . PASS END=10101565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:18,0 chr2 10102584 . G . PASS END=10102660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,181,255:40,0 chr2 10104015 . G . PASS END=10104171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:30:0,90,1078:0,90,255:40,0 chr2 10104364 . A . PASS END=10104475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,102,1596:0,102,255:40,0 chr2 10105416 . C . PASS END=10105510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:38:0,99,1383:0,99,255:40,0 chr2 10126252 . G . PASS END=10126268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr2 10126269 . C . PASS END=10126290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:26,0 chr2 10126291 . T . PASS END=10126292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 10126293 . C . PASS END=10126329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1111:0,90,255:33,0 chr2 10126330 . G A, 49.88 PASS DP=33;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=3.692;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,16,0:0.485,0.000:33:8,6,0:9,10,0:48:85,0,50,515,608,1123:255,0,255:17,0:4.9876e+01,6.6527e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,5,2,14:9,8,8,8 chr2 10126331 . T . PASS END=10126360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:33:0,92,1197:0,92,255:36,0 chr2 10126361 . A . PASS END=10126361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr2 10126362 . C . PASS END=10126370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1371:0,95,255:33,0 chr2 10126371 . G . PASS END=10126375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,92,255:31,0 chr2 10126376 . G . PASS END=10126379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 10126380 . C . PASS END=10126382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 10126383 . C . PASS END=10126386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 10126387 . C . PASS END=10126410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr2 10130824 . G . PASS END=10130911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:68:0,120,1800:0,194,255:40,0 chr2 10132135 . T . PASS END=10132161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:58:0,120,1800:0,131,255:40,0 chr2 10132162 . C . PASS END=10132274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:81:41:0,81,1215:0,107,255:40,0 chr2 10133335 . G . PASS END=10133372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:77:0,120,1800:0,168,255:40,0 chr2 10136007 . C . PASS END=10136097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:30:0,82,1103:0,82,255:40,0 chr2 10136098 . G . PASS END=10136098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:33,0 chr2 10136444 . T . PASS END=10136529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,154,255:40,0 chr2 10139093 . A . PASS END=10139157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,131,255:40,0 chr2 10140721 . G . PASS END=10140721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr2 10140722 . A . PASS END=10140726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr2 10140727 . G . PASS END=10140727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 10140728 . G . PASS END=10140821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:31:0,88,1156:0,88,255:40,0 chr2 10140822 . T . PASS END=10140822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:35,0 chr2 10140823 . G . PASS END=10140827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 10140828 . A . PASS END=10140830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:34,0 chr2 10140831 . T . PASS END=10140835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 10183685 . G . LowDepth;LowGQ END=10183685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 10183698 . C . LowDepth;LowGQ END=10183698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 10183736 . G . LowDepth;LowGQ END=10183736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 10183740 . C . LowDepth;LowGQ END=10183740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 10183748 . T . LowDepth;LowGQ END=10183748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 10183761 . G . LowDepth;LowGQ END=10183761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 10183768 . G . LowDepth;LowGQ END=10183768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 10183813 . G . LowDepth END=10183813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr2 10183844 . A . PASS END=10183868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr2 10183869 . C . PASS END=10183869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 10183870 . A . PASS END=10183871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 10183872 . A . PASS END=10183872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 10183873 . C . PASS END=10183877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 10183878 . C . PASS END=10183885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr2 10186277 . G . PASS END=10186287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:22,0 chr2 10186288 . G . PASS END=10186288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 10186289 . G . PASS END=10186304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:26,0 chr2 10186305 . T . PASS END=10186305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 10186306 . C . PASS END=10186309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,992:0,68,255:26,0 chr2 10186310 . G . PASS END=10186315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 10186316 . A . PASS END=10186316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 10186317 . A . PASS END=10186317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:26,0 chr2 10186318 . G . PASS END=10186327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1102:0,83,255:33,0 chr2 10186328 . A . PASS END=10186328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:31,0 chr2 10186329 . G . PASS END=10186334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1144:0,83,255:33,0 chr2 10186335 . G . PASS END=10186335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr2 10186336 . G . PASS END=10186336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 10186337 . T . PASS END=10186337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:32,0 chr2 10186338 . C . PASS END=10186345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1296:0,92,255:37,0 chr2 10186346 . A . PASS END=10186347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1243:0,59,255:35,0 chr2 10186348 . C . PASS END=10186360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1457:0,104,255:40,0 chr2 10186361 . A . PASS END=10186361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:62:41:0,62,1348:0,62,255:37,0 chr2 10186362 . C . PASS END=10186381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,112,1492:0,112,255:40,0 chr2 10186382 . G . PASS END=10186418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,105,1281:0,105,255:40,0 chr2 10186419 . A G,T, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=0.690;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,24,1,0:0.490,0.020,0.000:49:8,15,0,0:16,9,1,0:47:85,0,47,914,779,861,1014,1014,1014,1014:255,0,255:23,0:5.0000e+01,8.6978e-05,5.0000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78,34.77,69.54,69.54,37.78:10,14,7,18:10,14,13,12 chr2 10186420 . G . PASS END=10186456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,114,1729:0,114,255:40,0 chr2 10186457 . G . PASS END=10186502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:33:0,82,1125:0,82,255:40,0 chr2 10186503 . C . PASS END=10186513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,80,255:23,0 chr2 10186514 . C . PASS END=10186523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:19,0 chr2 10186524 . A . PASS END=10186524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,749:0,36,255:18,0 chr2 10186525 . C . PASS END=10186529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,717:0,63,255:23,0 chr2 10186530 . A . PASS END=10186530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,695:0,38,255:22,0 chr2 10186531 . T . PASS END=10186531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 10186532 . T . PASS END=10186533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 10186534 . T . PASS END=10186535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 10186536 . T . PASS END=10186543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:22,1 chr2 10186544 . C . PASS END=10186546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:17,0 chr2 10187777 . T . PASS END=10187780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,794:0,41,255:22,0 chr2 10187781 . T . PASS END=10187781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:23,0 chr2 10187782 . A . PASS END=10187782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 10187783 . A . PASS END=10187784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:25:0,49,884:0,49,255:27,0 chr2 10187785 . T . PASS END=10187785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 10187786 . C . PASS END=10187786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 10187787 . C . PASS END=10187788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:43:30:0,43,1016:0,43,255:29,0 chr2 10187789 . C . PASS END=10187789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 10187790 . C . PASS END=10187790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 10187791 . T . PASS END=10187791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1149:0,82,255:32,0 chr2 10187792 . C . PASS END=10187792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1061:0,27,255:30,0 chr2 10187793 . A . PASS END=10187793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:32,0 chr2 10187794 . G . PASS END=10187794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr2 10187795 . A . PASS END=10187795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:32,0 chr2 10187796 . G . PASS END=10187796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1164:0,71,255:33,0 chr2 10187797 . C . PASS END=10187798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 10187799 . C . PASS END=10187799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr2 10187800 . T . PASS END=10187802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1279:0,89,255:35,0 chr2 10187803 . T . PASS END=10187803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:35,0 chr2 10187804 . C . PASS END=10187914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,81,255:40,0 chr2 10187915 . G . PASS END=10187918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 10187919 . G . PASS END=10187926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1202:0,83,255:29,0 chr2 10187927 . A . PASS END=10187927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 10187928 . G . PASS END=10187959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 10187960 . T . PASS END=10187960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,951:0,76,255:27,0 chr2 10187961 . C . PASS END=10187961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 10187962 . T . PASS END=10187984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,953:0,62,255:26,0 chr2 10187985 . G . PASS END=10187985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 10187986 . C . PASS END=10187987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 10187988 . T . PASS END=10187988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr2 10187989 . G . PASS END=10188001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 10188002 . G . PASS END=10188003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 10188004 . G . PASS END=10188007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 10188008 . A . PASS END=10188008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr2 10188009 . G . PASS END=10188033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 10188034 . C . PASS END=10188034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 10188035 . C . PASS END=10188043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 10188044 . G . PASS END=10188051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 10188052 . G . PASS END=10188053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 10188054 . T . PASS END=10188080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,627:0,40,255:19,0 chr2 10188081 . A . PASS END=10188081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 10188082 . G . PASS END=10188089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr2 10188090 . G . PASS END=10188095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr2 10188096 . T . PASS END=10188096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,413:0,28,255:12,0 chr2 10188097 . T . PASS END=10188111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 10188112 . C . PASS END=10188112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 10188113 . A . PASS END=10188115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 10188116 . C . PASS END=10188121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 10188122 . A . PASS END=10188122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr2 10188123 . C . PASS END=10188125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 10188126 . A . PASS END=10188128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr2 10188129 . G . PASS END=10188136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr2 10188137 . A . PASS END=10188137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 10188138 . G . PASS END=10188138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 10188139 . C . PASS END=10188152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:13:0,31,451:0,31,255:13,0 chr2 10188153 . C . PASS END=10188158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 10188159 . A . PASS END=10188180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,488:0,39,255:13,0 chr2 10188181 . T . PASS END=10188219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:18,0 chr2 10188220 . G . PASS END=10188226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 10188227 . G . PASS END=10188227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 10188228 . C . PASS END=10188229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,707:0,27,255:19,0 chr2 10188230 . G . PASS END=10188230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 10188231 . T . PASS END=10188231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:22,0 chr2 10188232 . T . PASS END=10188232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr2 10188233 . C . PASS END=10188253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 10188254 . T . PASS END=10188254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 10188255 . A . PASS END=10188275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr2 10188276 . A . PASS END=10188277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 10188278 . A . PASS END=10188288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:20,0 chr2 10188289 . G . PASS END=10188291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 10188292 . T . PASS END=10188351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,782:0,62,255:26,0 chr2 10188352 . T . PASS END=10188352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr2 10188353 . A . PASS END=10188360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 10188361 . A . PASS END=10188361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr2 10188362 . C . PASS END=10188363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 10188364 . A . PASS END=10188365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr2 10188366 . C . PASS END=10188366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 10188367 . T . PASS END=10188367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 10188368 . T . PASS END=10188368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 10188369 . T . PASS END=10188391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr2 10188392 . T . PASS END=10188413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:24,0 chr2 10188414 . T . PASS END=10188417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 10188418 . A . PASS END=10188418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 10188419 . G . PASS END=10188422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 10188423 . A . PASS END=10188423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 10188424 . G . PASS END=10188425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr2 10188426 . C . PASS END=10188429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1263:0,99,255:34,0 chr2 10188430 . T . PASS END=10188430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr2 10188431 . C . PASS END=10188485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1194:0,83,255:35,0 chr2 10188486 . T . PASS END=10188488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 10188489 . T . PASS END=10188491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 10188492 . T . PASS END=10188493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 10188494 . C . PASS END=10188494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr2 10188495 . C . PASS END=10188507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 10188508 . C . PASS END=10188539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1155:0,80,255:32,0 chr2 10188540 . T . PASS END=10188540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 10188541 . G . PASS END=10188553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 10188554 . A . PASS END=10188569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,67,255:26,0 chr2 10188570 . T . PASS END=10188570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:23,0 chr2 10188571 . T . PASS END=10188585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:25,0 chr2 10188586 . G . PASS END=10188586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 10188587 . T . PASS END=10188609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,953:0,65,255:26,0 chr2 10188610 . T . PASS END=10188611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 10188612 . T . PASS END=10188626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,894:0,72,255:25,0 chr2 10188627 . T . PASS END=10188627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 10188628 . T . PASS END=10188631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 10188632 . C . PASS END=10188632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 10188633 . G . PASS END=10188639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr2 10188640 . G . PASS END=10188640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 10188641 . A . PASS END=10188648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,74,255:24,0 chr2 10188649 . A T, 117.84 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,8,0:0,16,0:68:156,71,0,819,71,819:255,72,0:0,0:1.1784e+02,6.7844e+01,7.7658e-07,4.5000e+02,1.0261e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,14:0,0,10,14 chr2 10188650 . T . PASS END=10188650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 10188651 . G . PASS END=10188651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 10188652 . C . PASS END=10188654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 10188655 . C . PASS END=10188657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 10188658 . C . PASS END=10188659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 10188660 . C . PASS END=10188670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:21:0,50,798:0,50,255:19,0 chr2 10188671 . A . PASS END=10188676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 10188677 . T . PASS END=10188686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,720:0,44,255:19,0 chr2 10188687 . G . PASS END=10188702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:18,0 chr2 10188703 . C . PASS END=10188711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr2 10188712 . C . PASS END=10188712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:9,0 chr2 10188713 . A . PASS END=10188718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 10188719 . A . PASS END=10188721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:8,0 chr2 10188722 . G . LowGQ END=10188722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:8,0 chr2 10192351 . C . PASS END=10192351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 10192354 . G . PASS END=10192361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:26,0 chr2 10192362 . C . PASS END=10192371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 10192372 . G . PASS END=10192372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 10192373 . C . PASS END=10192383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1164:0,84,255:31,0 chr2 10192384 . G . PASS END=10192384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr2 10192385 . C . PASS END=10192476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1105:0,80,255:39,0 chr2 10192477 . G . PASS END=10192478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 10192479 . C . PASS END=10192484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1052:0,90,255:31,0 chr2 10192485 . A . PASS END=10192486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1048:0,62,255:29,0 chr2 10192487 . G . PASS END=10192490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 10192491 . A . PASS END=10192491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 10192492 . G . PASS END=10192494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 10192495 . A . PASS END=10192495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 10192496 . C . PASS END=10192498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 10192499 . C . PASS END=10192499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr2 10192500 . C . PASS END=10192502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 10192503 . A . PASS END=10192503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 10192504 . C . PASS END=10192507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:27,0 chr2 10192508 . G . PASS END=10192511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1033:0,73,255:26,0 chr2 10192512 . G . PASS END=10192512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,967:0,18,255:24,0 chr2 10192513 . C . PASS END=10192513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 10192514 . C . PASS END=10192520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 10192521 . C . PASS END=10192521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 10192522 . A . PASS END=10192522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 10192523 . C . PASS END=10192523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:28,0 chr2 10192524 . A . PASS END=10192524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 10192525 . T . PASS END=10192525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr2 10192526 . G . PASS END=10192532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 10192533 . A . PASS END=10192533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 10192534 . A . PASS END=10192534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 10192535 . G . PASS END=10192535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 10192536 . A . PASS END=10192536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 10192537 . A . PASS END=10192537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 10192538 . G . PASS END=10192539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 10192540 . T . PASS END=10192540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 10192541 . C . PASS END=10192542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 10192543 . C . PASS END=10192543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 10192544 . A . PASS END=10192544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 10192545 . G . PASS END=10192545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 10192546 . G . PASS END=10192549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr2 10192550 . G . PASS END=10192550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 10192551 . C . PASS END=10192556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 10192557 . G . PASS END=10192577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,884:0,61,255:25,0 chr2 10192578 . A . PASS END=10192581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 10192582 . C . PASS END=10192590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 10192591 . A . PASS END=10192634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,621:0,46,255:18,0 chr2 10192722 . C . PASS END=10192722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:29,1 chr2 10192765 . G . PASS END=10192765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1482:0,107,255:39,0 chr2 10192800 . C . PASS END=10192800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,105,1575:0,113,255:34,0 chr2 10192850 . G . PASS END=10192850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:51:40:0,51,765:0,81,255:16,0 chr2 10192851 . G GTT,GT,GTTT, 50.00 PASS DP=37;MQ=249.51;MQRankSum=4.588;ReadPosRankSum=-0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,15,5,3,0:0.405,0.135,0.081,0.000:37:7,8,3,1,0:7,7,2,2,0:46:66,0,45,130,93,156,120,230,180,167,330,330,330,330,330:255,0,255:16,27:5.0000e+01,1.2011e-04,4.7536e+01,1.2983e+02,1.0948e+02,1.5948e+02,1.2045e+02,2.4555e+02,1.9566e+02,1.7041e+02,3.4832e+02,3.6432e+02,3.6432e+02,3.6432e+02,3.5133e+02:0.00,16.00,19.01,16.00,32.00,19.01,16.00,32.00,32.00,19.01,34.77,50.77,50.77,50.77,37.78:7,7,11,12:10,4,12,11 chr2 10192953 . C . PASS END=10192953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 10193091 . A . PASS END=10193091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr2 10193288 . C . PASS END=10193288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 10193308 . G . PASS END=10193308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 10193372 . A . PASS END=10193372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 10193390 . C . PASS END=10193390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 10193588 . C . PASS END=10193588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 10193590 . C . PASS END=10193590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 10193789 . G . PASS END=10193789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 10193930 . T . PASS END=10193930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 10193935 . C . PASS END=10193935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 10193954 . G . PASS END=10193954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 10194020 . A . PASS END=10194020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:65:0,120,1800:0,126,255:40,0 chr2 10194097 . A . PASS END=10194097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 10194129 . G . PASS END=10194129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 10194242 . T . PASS END=10194242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 10194246 . C . PASS END=10194246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 10194270 . C . PASS END=10194270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:36,0 chr2 10194292 . G . PASS END=10194292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 10194359 . G . PASS END=10194359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 10194528 . A . PASS END=10194528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 10194624 . T . PASS END=10194624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 10194715 . C . PASS END=10194715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 10194737 . G . PASS END=10194737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 10194899 . T . PASS END=10194899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:86:0,120,1800:0,242,255:40,0 chr2 10194907 . C . PASS END=10194907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:87:0,120,1800:0,245,255:40,0 chr2 10198980 . T . PASS END=10198985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr2 10198986 . G . PASS END=10198997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr2 10198998 . C . PASS END=10198998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 10198999 . T . PASS END=10199016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1052:0,87,255:30,0 chr2 10199017 . C . PASS END=10199017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 10199018 . C . PASS END=10199019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 10199020 . T . PASS END=10199020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 10199021 . C . PASS END=10199048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1134:0,87,255:33,0 chr2 10199049 . C . PASS END=10199049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:29,0 chr2 10199050 . G . PASS END=10199050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 10199051 . G . PASS END=10199051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr2 10199052 . C . PASS END=10199066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 10199067 . G . PASS END=10199068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 10199069 . G . PASS END=10199085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,988:0,84,255:28,0 chr2 10206031 . T . PASS END=10206039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1224:0,111,255:37,0 chr2 10206040 . T . PASS END=10206040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:35,0 chr2 10206041 . T . PASS END=10206072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1210:0,83,255:37,0 chr2 10206073 . T . PASS END=10206083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:29:0,63,945:0,73,255:24,0 chr2 10220033 . C . PASS END=10220059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr2 10220060 . G . PASS END=10220082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr2 10220083 . C . PASS END=10220086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr2 10220087 . C . PASS END=10220096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:6,0 chr2 10220097 . C . PASS END=10220123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 10220124 . T . PASS END=10220124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 10220125 . C . PASS END=10220138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 10220139 . A . PASS END=10220176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,149:0,12,149:6,0 chr2 10220177 . G . PASS END=10220207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 10220208 . G . PASS END=10220213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,149:0,12,149:5,0 chr2 10220214 . G . PASS END=10220226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:3:0,9,108:0,9,108:3,0 chr2 10220227 . C . PASS END=10220231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:4,0 chr2 10220232 . A . LowGQ END=10220249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,70:0,0,88:3,0 chr2 10220250 . G . PASS END=10220266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr2 10220267 . T . LowGQ END=10220267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 10220268 . G . PASS END=10220282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr2 10220283 . G . PASS END=10220283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 10220284 . C . PASS END=10220287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 10220288 . G . PASS END=10220288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 10220289 . A . PASS END=10220291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 10220292 . C . PASS END=10220292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 10220293 . T . PASS END=10220293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr2 10220294 . C . PASS END=10220294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:5,0 chr2 10220295 . T . PASS END=10220340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr2 10220341 . C . PASS END=10220350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,178:3,0 chr2 10262746 . A . PASS END=10262747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr2 10262748 . G . PASS END=10262748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 10262749 . G . PASS END=10262754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:16:0,41,612:0,41,255:18,0 chr2 10262755 . G . PASS END=10262774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr2 10262775 . A . PASS END=10262775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 10262776 . A . PASS END=10262785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,731:0,63,255:24,0 chr2 10262786 . C . PASS END=10262786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 10262787 . C . PASS END=10262804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,825:0,72,255:26,0 chr2 10262805 . G . PASS END=10262807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 10262808 . A . PASS END=10262809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 10262810 . G . PASS END=10262810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr2 10262811 . G . PASS END=10262812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 10262813 . C . PASS END=10262813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 10262814 . C . PASS END=10262830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 10262831 . G . PASS END=10262833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 10262834 . G . PASS END=10262834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 10262835 . A . PASS END=10262835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:25,0 chr2 10262836 . T . PASS END=10262837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 10262838 . T . PASS END=10262838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 10262839 . A . PASS END=10262839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 10262840 . A . PASS END=10262861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,67,255:26,0 chr2 10262862 . G . PASS END=10262864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 10262865 . C . PASS END=10262867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 10262868 . G . PASS END=10262873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr2 10262874 . T . PASS END=10262874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:18,0 chr2 10262875 . G . PASS END=10262882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 10262883 . C . PASS END=10262919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,657:0,41,255:19,0 chr2 10262920 . T G, 101.18 PASS DP=18;MQ=248.73;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,10,0:0,8,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,8:0,0,10,8 chr2 10262921 . C . PASS END=10262924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 10262925 . T . PASS END=10262926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr2 10262927 . T . PASS END=10262927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 10262928 . G . PASS END=10262935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 10262936 . T . PASS END=10262936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 10262937 . C . PASS END=10262939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 10262940 . T . PASS END=10262940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 10262941 . G . PASS END=10262941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 10262942 . T . PASS END=10262957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,22,255:9,0 chr2 10262958 . C . PASS END=10262970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 10262971 . C . PASS END=10262972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 10262973 . G . PASS END=10262973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 10262974 . C . PASS END=10262989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 10262990 . T . PASS END=10262990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 10262991 . G . PASS END=10263002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:11,0 chr2 10263003 . C . PASS END=10263003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 10263004 . T . PASS END=10263024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:13,0 chr2 10263110 . C . PASS END=10263116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr2 10263117 . C . PASS END=10263117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 10263118 . C . PASS END=10263145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1111:0,80,255:32,0 chr2 10263146 . A . PASS END=10263146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:30,0 chr2 10263147 . A . PASS END=10263151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1103:0,93,255:31,0 chr2 10263152 . G . PASS END=10263152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 10263153 . C . PASS END=10263163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 10263164 . T . PASS END=10263165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr2 10263166 . C . PASS END=10263167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 10263168 . A . PASS END=10263168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 10263169 . G . PASS END=10263178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 10263179 . G . PASS END=10263184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,77,255:26,0 chr2 10263499 . T . PASS END=10263533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr2 10263534 . C . LowGQ END=10263534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:5,0 chr2 10263535 . G . PASS END=10263536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 10263537 . C . PASS END=10263537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 10263538 . G . PASS END=10263538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 10263539 . T . PASS END=10263539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 10263540 . G . PASS END=10263542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 10263543 . G . PASS END=10263561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:11,0 chr2 10263562 . G . PASS END=10263563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr2 10263564 . A . PASS END=10263565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 10263566 . A . PASS END=10263566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 10263567 . C . PASS END=10263567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr2 10263568 . C . LowGQ END=10263569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:0,0,255:10,0 chr2 10263570 . C . PASS END=10263573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 10263574 . C . PASS END=10263574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 10263575 . G . PASS END=10263575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 10263576 . C . PASS END=10263577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,279:0,16,255:10,0 chr2 10263578 . T . PASS END=10263586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 10263587 . T . PASS END=10263587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr2 10263588 . C . PASS END=10263591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:11,0 chr2 10263592 . A . PASS END=10263592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 10263593 . T . PASS END=10263593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr2 10263594 . C . PASS END=10263594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 10263595 . G . PASS END=10263606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr2 10263607 . A . PASS END=10263607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:11,0 chr2 10263608 . T . PASS END=10263608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 10263609 . C . PASS END=10263609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr2 10263610 . T . PASS END=10263657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,344:0,33,255:11,0 chr2 10263863 . G . PASS END=10263979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,99,1383:0,99,255:40,0 chr2 10264844 . G . PASS END=10264941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1111:0,87,255:40,0 chr2 10264942 . T . PASS END=10264942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1173:0,66,255:30,0 chr2 10264943 . C . PASS END=10264971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1070:0,90,255:33,0 chr2 10264972 . A . PASS END=10264972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 10264973 . G . PASS END=10264977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1103:0,90,255:30,0 chr2 10267002 . G . PASS END=10267096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,107,1619:0,107,255:40,0 chr2 10267214 . G . PASS END=10267347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:55:0,120,1800:0,147,255:40,0 chr2 10268975 . G . PASS END=10269079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,132,255:40,0 chr2 10269168 . G . PASS END=10269282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,139,255:40,0 chr2 10269361 . G . PASS END=10269513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:35:0,81,1215:0,90,255:40,0 chr2 10281981 . G . PASS END=10281988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 10281989 . A . PASS END=10281990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 10281991 . A . PASS END=10281991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,841:0,53,255:27,0 chr2 10281992 . C . PASS END=10282068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,940:0,83,255:32,0 chr2 10282069 . C . PASS END=10282069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:29,0 chr2 10282070 . A . PASS END=10282081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 10282382 . G . PASS END=10282382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 10282383 . G . PASS END=10282383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 10282384 . G . PASS END=10282387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 10282388 . A . PASS END=10282388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 10282389 . G . PASS END=10282410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:25,0 chr2 10282411 . G . PASS END=10282415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 10282416 . A . PASS END=10282416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 10282417 . C . PASS END=10282426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr2 10282427 . G . PASS END=10282432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 10282433 . C . PASS END=10282467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1086:0,90,255:31,0 chr2 10282468 . C . PASS END=10282470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 10282471 . C . PASS END=10282479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 10282480 . C . PASS END=10282480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 10282481 . G . PASS END=10282482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 10282483 . G . PASS END=10282497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 10282498 . T . PASS END=10282498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:20,0 chr2 10282499 . T . PASS END=10282502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 10350437 . T . PASS END=10350440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 10350441 . C . PASS END=10350441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 10350442 . C . PASS END=10350444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 10350445 . G . PASS END=10350457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,801:0,66,255:24,0 chr2 10350458 . T . PASS END=10350458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,746:0,55,255:23,0 chr2 10350459 . C . PASS END=10350463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,817:0,72,255:25,0 chr2 10350464 . A . PASS END=10350464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 10350465 . C . PASS END=10350465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 10350466 . T . PASS END=10350466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 10350467 . G . PASS END=10350471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr2 10350472 . G . PASS END=10350479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 10350480 . A . PASS END=10350480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr2 10350481 . A . PASS END=10350484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1186:0,83,255:32,0 chr2 10350485 . C . PASS END=10350486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr2 10350487 . G . PASS END=10350491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1135:0,80,255:32,0 chr2 10350492 . C . PASS END=10350492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr2 10350493 . A . PASS END=10350603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1083:0,81,255:35,0 chr2 10350604 . C . PASS END=10350605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr2 10350606 . C . PASS END=10350607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 10350608 . C . PASS END=10350611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 10350612 . G . PASS END=10350613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr2 10350614 . A . PASS END=10350648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,886:0,69,255:26,0 chr2 10350649 . A . PASS END=10350649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:22,0 chr2 10350650 . T . PASS END=10350653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 10350654 . T . PASS END=10350654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 10350655 . T . PASS END=10350662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 10350663 . C . PASS END=10350663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 10350664 . T . PASS END=10350669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 10350670 . C . PASS END=10350702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:18,0 chr2 10350703 . A . PASS END=10350703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 10350704 . G . PASS END=10350714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 10350715 . G . PASS END=10350716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 10350717 . C . PASS END=10350723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 10559884 . A . PASS END=10559886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:9,0 chr2 10559887 . G . PASS END=10559890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 10559891 . A . PASS END=10559891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr2 10559892 . A . PASS END=10559892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 10559893 . C . PASS END=10559893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 10559894 . A . PASS END=10559894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 10559895 . G . PASS END=10559908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 10559909 . G . PASS END=10559909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 10559910 . G . PASS END=10559928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:13,0 chr2 10559929 . C . PASS END=10559937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 10559938 . A . PASS END=10559938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr2 10559939 . A . PASS END=10559967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr2 10559968 . G . PASS END=10559968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 10559969 . A . PASS END=10560008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,704:0,44,255:19,0 chr2 10560009 . C . PASS END=10560012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 10560013 . A . PASS END=10560013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr2 10560014 . C . PASS END=10560028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 10560029 . A . PASS END=10560029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 10560030 . G . PASS END=10560048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 10560049 . T . PASS END=10560049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:21,0 chr2 10560050 . T . PASS END=10560051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 10560052 . C . PASS END=10560052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 10560053 . C . PASS END=10560053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 10560054 . C . PASS END=10560054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 10560055 . T . PASS END=10560061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 10560062 . A . PASS END=10560062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 10560063 . C . PASS END=10560082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 10560083 . A . PASS END=10560083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 10560084 . C . PASS END=10560084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 10560085 . G . PASS END=10560085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 10560086 . T . PASS END=10560091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr2 10560092 . G . PASS END=10560092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,815:0,36,255:20,0 chr2 10560093 . C . PASS END=10560093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 10560094 . A . PASS END=10560094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 10560095 . C . PASS END=10560095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 10560096 . C . PASS END=10560096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 10560097 . T . PASS END=10560097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 10560098 . T . PASS END=10560098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr2 10560099 . C . PASS END=10560122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,746:0,66,255:24,0 chr2 10560123 . C . PASS END=10560123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 10560124 . G . PASS END=10560125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 10560126 . C . PASS END=10560126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr2 10560127 . T . PASS END=10560148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,870:0,72,255:24,0 chr2 10560149 . T . PASS END=10560149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 10560150 . G . PASS END=10560172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,862:0,64,255:24,0 chr2 10560173 . T . PASS END=10560222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,598:0,44,255:19,0 chr2 10560223 . G . PASS END=10560224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 10560225 . C . PASS END=10560226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 10560227 . A . PASS END=10560227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:13,0 chr2 10560228 . C . PASS END=10560238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr2 10560239 . G . PASS END=10560239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 10560240 . C . PASS END=10560240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,413:0,3,255:11,0 chr2 10560241 . G . PASS END=10560254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 10560255 . C . PASS END=10560255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 10560256 . G . PASS END=10560261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr2 10563109 . G . PASS END=10563218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,1016:0,81,255:40,0 chr2 10563219 . T . PASS END=10563219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1394:0,76,255:31,0 chr2 10563220 . G . PASS END=10563240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:34,0 chr2 10563241 . A . PASS END=10563258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,74,255:25,0 chr2 10564651 . T . PASS END=10564739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:34:0,96,1258:0,97,255:40,0 chr2 10566850 . G . PASS END=10566850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 10566851 . C . PASS END=10566851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 10566852 . A . PASS END=10566852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,658:0,54,255:18,0 chr2 10566853 . A . PASS END=10566853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,568:0,23,255:17,0 chr2 10566854 . A . PASS END=10566854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:17,0 chr2 10566855 . C . PASS END=10566856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 10566857 . G . PASS END=10566857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 10566858 . T . PASS END=10566860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 10566861 . T . PASS END=10566861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 10566862 . T . PASS END=10566867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:17,0 chr2 10566868 . A . PASS END=10566868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,466:0,18,255:15,0 chr2 10566869 . A . PASS END=10566884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,593:0,54,255:19,0 chr2 10566885 . A . PASS END=10566887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 10566888 . A . PASS END=10566888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr2 10566889 . G . PASS END=10566900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:21,0 chr2 10566901 . T . PASS END=10566901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:19,0 chr2 10566902 . C . PASS END=10566903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 10566904 . T . PASS END=10566906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr2 10566907 . G . PASS END=10566910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 10566911 . G . PASS END=10566911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr2 10566912 . C . PASS END=10566913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 10566914 . G . PASS END=10566914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 10566915 . C . PASS END=10566917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 10566918 . T . PASS END=10566940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr2 10566941 . G . PASS END=10566941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 10566942 . T . PASS END=10566947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 10580850 . C . PASS END=10580854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 10580855 . C . PASS END=10580881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,969:0,67,255:25,0 chr2 10580882 . C . PASS END=10580886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 10580887 . T . PASS END=10580887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr2 10580888 . G . PASS END=10580994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:31:0,85,1180:0,85,255:40,0 chr2 10581634 . C . PASS END=10581640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1172:0,93,255:33,0 chr2 10581641 . G . PASS END=10581641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:32,0 chr2 10581642 . G . PASS END=10581849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:33:0,99,1249:0,99,255:40,0 chr2 10581943 . C . PASS END=10582055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:58:0,120,1800:0,157,255:40,0 chr2 10582138 . C . PASS END=10582283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:36:0,81,1215:0,91,255:40,0 chr2 10582284 . T . PASS END=10582300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr2 10583356 . C . PASS END=10583439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:55:0,120,1800:0,144,255:40,0 chr2 10583616 . C . PASS END=10583697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:39:0,87,1341:0,87,255:40,0 chr2 10583828 . C . PASS END=10583962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,109,1619:0,109,255:40,0 chr2 10584221 . T . PASS END=10584393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:86:34:0,86,1210:0,86,255:40,0 chr2 10584600 . C . PASS END=10584773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:35:0,84,1337:0,84,255:40,0 chr2 10585057 . A . PASS END=10585158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:68:0,120,1800:0,191,255:40,0 chr2 10712197 . T . PASS END=10712316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:52:0,108,1620:0,135,255:40,0 chr2 10717762 . C . PASS END=10717768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1017:0,84,255:34,0 chr2 10717769 . A . PASS END=10717779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:34,0 chr2 10717780 . C . PASS END=10717780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:31,0 chr2 10717781 . A . PASS END=10717787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1266:0,91,255:35,0 chr2 10717788 . T . PASS END=10717788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:34,0 chr2 10717789 . G . PASS END=10717805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,107,1319:0,107,255:40,0 chr2 10717806 . C T, 46.09 PASS DP=47;MQ=249.40;MQRankSum=5.030;ReadPosRankSum=0.957;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,18,0:0.391,0.000:46:13,4,0:15,14,0:45:81,0,50,636,972,1608:255,0,255:25,0:4.6086e+01,1.2866e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,12,6:14,14,10,8 chr2 10717807 . G . PASS END=10717843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1434:0,104,255:40,0 chr2 10717844 . A . PASS END=10717864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:34:0,96,1336:0,101,255:38,0 chr2 10729169 . T . PASS END=10729416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:34:0,83,1211:0,83,255:40,0 chr2 10729704 . T . PASS END=10729859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,114,1735:0,114,255:40,2 chr2 10729860 . G . PASS END=10729877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:41:0,90,1350:0,107,255:40,0 chr2 10740979 . C . PASS END=10741068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,154,255:40,0 chr2 10742902 . C . PASS END=10743000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,2:100:99:67:0,120,1800:0,193,255:40,0 chr2 10743204 . C . PASS END=10743228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,135,255:40,0 chr2 10743229 . A . PASS END=10743280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,105,1575:0,106,255:40,0 chr2 10743281 . G . PASS END=10743281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,7:49:9:49:0,9,1319:0,9,255:30,0 chr2 10743282 . C . PASS END=10743283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,108,1620:0,147,255:36,0 chr2 10747311 . C . PASS END=10747437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:33:0,91,1242:0,91,255:40,0 chr2 10761235 . T . PASS END=10761285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,159,255:40,0 chr2 10762217 . T . PASS END=10762257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:43:0,96,1440:0,113,255:40,0 chr2 10762258 . A . PASS END=10762263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:46:0,81,1215:0,122,255:34,0 chr2 10762264 . C . PASS END=10762271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:60:42:0,60,900:0,126,255:23,0 chr2 10762272 . G . PASS END=10762276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:51:38:0,51,765:0,58,255:18,0 chr2 10774673 . T . PASS END=10774684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:75:0,120,1800:0,192,255:40,0 chr2 10784446 . T . PASS END=10784498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,155,255:40,0 chr2 10794607 . C . PASS END=10794673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:59:0,120,1800:0,177,255:40,0 chr2 10797868 . G . PASS END=10797993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1260:0,92,255:40,0 chr2 10797994 . A . PASS END=10798017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,931:0,64,255:26,0 chr2 10799298 . C . PASS END=10799355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,105,1800:0,105,255:40,0 chr2 10799356 . A . PASS END=10799356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:77:68:0,77,2099:0,77,255:40,0 chr2 10799357 . T . PASS END=10799376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,153,255:40,0 chr2 10803085 . T . PASS END=10803170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:31:0,90,1311:0,93,255:40,0 chr2 10807344 . C . PASS END=10807404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,150,255:40,0 chr2 10808784 . G . PASS END=10808819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,170,255:40,0 chr2 10808820 . T . PASS END=10808849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,160,255:40,0 chr2 10811680 . C . PASS END=10811816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:50:0,120,1800:0,133,255:40,0 chr2 10813646 . C . PASS END=10813683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:99:0,120,1800:0,255,255:40,0 chr2 10815920 . C . PASS END=10815997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:62:0,120,1800:0,148,255:40,0 chr2 10822097 . C . PASS END=10822195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:38:0,96,1374:0,101,255:40,0 chr2 10824693 . C . PASS END=10824738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,154,255:40,0 chr2 10829922 . C . PASS END=10829922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 10829923 . T . PASS END=10829923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr2 10829924 . C . PASS END=10829942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr2 10829943 . G . PASS END=10829943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 10829944 . C . PASS END=10829985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,917:0,62,255:26,0 chr2 10829986 . A . PASS END=10829986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 10829987 . T . PASS END=10829987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 10862976 . A . PASS END=10863096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:33:0,83,1194:0,83,255:40,0 chr2 10863097 . A . PASS END=10863097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:31,0 chr2 10863098 . C . PASS END=10863104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 10866628 . G . PASS END=10866695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,109,1710:0,109,255:40,0 chr2 10894107 . C . PASS END=10894169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1215:0,101,255:40,0 chr2 10894170 . G . PASS END=10894192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 10897553 . G . PASS END=10897582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:76:0,120,1800:0,201,255:40,0 chr2 10904457 . T . PASS END=10904551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:33:0,89,1158:0,89,255:40,0 chr2 10908845 . C . PASS END=10908936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,110,1520:0,110,255:40,0 chr2 10911965 . G . PASS END=10912054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:37:0,94,1426:0,94,255:40,0 chr2 10912055 . C . PASS END=10912063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,111,255:31,0 chr2 10912668 . A . PASS END=10912736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,137,255:40,0 chr2 10914799 . C . PASS END=10914810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr2 10914811 . G . PASS END=10914821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr2 10914822 . C . PASS END=10914822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 10914823 . A . PASS END=10914853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:31:0,86,1239:0,86,255:40,0 chr2 10914914 . A . PASS END=10915006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,119,1800:0,119,255:40,0 chr2 10915104 . G . PASS END=10915127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,132,255:40,0 chr2 10915128 . T . PASS END=10915197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:60:0,120,1800:0,161,255:40,0 chr2 10917711 . C . PASS END=10917713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 10917714 . A . PASS END=10917714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr2 10917715 . C . PASS END=10917718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 10917719 . C . PASS END=10917721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 10917722 . T . PASS END=10917722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 10917723 . G . PASS END=10917733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,738:0,63,255:23,0 chr2 10917734 . A . PASS END=10917734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 10917735 . A . PASS END=10917747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,947:0,69,255:26,0 chr2 10917748 . C . PASS END=10917749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 10917750 . T . PASS END=10917750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 10917751 . T . PASS END=10917776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1186:0,96,255:32,0 chr2 10917777 . C . PASS END=10917777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr2 10917778 . C . PASS END=10917790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 10917791 . T . PASS END=10917791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr2 10917792 . G . PASS END=10917799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 10917800 . T . PASS END=10917800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 10917801 . G . PASS END=10917802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 10917803 . T . PASS END=10917817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1092:0,74,255:27,0 chr2 10917818 . C . LowGQ END=10917819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,749:32,0,255:25,4 chr2 10917820 . G . PASS END=10917820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:16:28:0,16,857:0,16,255:24,1 chr2 10917821 . A . PASS END=10917821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:26,0 chr2 10917822 . G . PASS END=10917822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 10917823 . A . PASS END=10917832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,887:0,67,255:26,0 chr2 10917833 . T . PASS END=10917833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,861:0,26,255:21,0 chr2 10917834 . G . PASS END=10917845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,929:0,62,255:22,0 chr2 10917846 . G . PASS END=10917848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 10918698 . G . PASS END=10918699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,961:0,65,255:26,0 chr2 10918700 . C . PASS END=10918704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr2 10918705 . T . PASS END=10918706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 10918707 . C . PASS END=10918707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 10918708 . T . PASS END=10918708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 10918709 . G . PASS END=10918711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 10918712 . C . PASS END=10918713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 10918714 . G . PASS END=10918781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1082:0,80,255:36,0 chr2 10918782 . G . PASS END=10918793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr2 10918794 . A . PASS END=10918794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 10918795 . G . PASS END=10918795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 10922369 . G . PASS END=10922371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 10922372 . T . PASS END=10922462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1070:0,84,255:39,0 chr2 10922463 . C . PASS END=10922463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 10922464 . G . PASS END=10922466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1180:0,90,255:31,0 chr2 10922467 . A . PASS END=10922467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr2 10922468 . T . PASS END=10922478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1141:0,93,255:31,0 chr2 10922479 . T . PASS END=10922495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr2 10922496 . C . PASS END=10922501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 10923300 . G . PASS END=10923315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,107,1652:0,107,255:40,0 chr2 10923316 . C . PASS END=10923352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:61:0,120,1800:0,183,255:40,0 chr2 10923353 . T C, 49.71 PASS DP=66;MQ=250.00;MQRankSum=6.964;ReadPosRankSum=3.353;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,31,0:0.470,0.000:66:15,15,0:20,16,0:48:84,0,50,1109,1223,2331:255,0,255:33,0:4.9715e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,16,12,19:25,10,12,19 chr2 10923354 . G . PASS END=10923389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,133,255:40,0 chr2 10924384 . T . PASS END=10924449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,117,1782:0,117,255:40,0 chr2 10924450 . A . PASS END=10924450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1624:0,78,255:40,0 chr2 10924451 . A . PASS END=10924452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 10925060 . C . PASS END=10925066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr2 10925067 . T . PASS END=10925067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 10925068 . C . PASS END=10925075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:23,0 chr2 10925076 . T . PASS END=10925076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 10925077 . C . PASS END=10925086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,781:0,72,255:24,0 chr2 10925087 . T . PASS END=10925087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:23,0 chr2 10925088 . C . PASS END=10925103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,886:0,61,255:25,0 chr2 10925104 . G . PASS END=10925104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 10925105 . G . PASS END=10925114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr2 10925115 . C . PASS END=10925115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 10925116 . C . PASS END=10925129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,770:0,63,255:21,0 chr2 10925130 . G . PASS END=10925130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr2 10925131 . T . PASS END=10925137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 10925138 . A . PASS END=10925154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,682:0,44,255:19,0 chr2 10925155 . C . PASS END=10925156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 10927407 . C . PASS END=10927407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 10927408 . T . PASS END=10927408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 10927409 . G . PASS END=10927423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,765:0,69,255:25,0 chr2 10927424 . G . PASS END=10927547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1064:0,81,255:40,0 chr2 10927548 . G . PASS END=10927565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,71,255:25,0 chr2 10928823 . C . PASS END=10928868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:79:0,120,1800:0,207,255:40,0 chr2 10928869 . C . PASS END=10928895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,187,255:40,0 chr2 10929023 . C . PASS END=10929095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:32:0,90,1350:0,96,255:40,0 chr2 10929096 . C . PASS END=10929100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 10929101 . T . PASS END=10929107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 10929875 . C . PASS END=10929880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,946:0,78,255:26,0 chr2 10929881 . C . PASS END=10929904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,970:0,81,255:35,0 chr2 10929905 . A . PASS END=10929975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1216:0,83,255:38,0 chr2 10929976 . C . PASS END=10929976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 10929977 . G . PASS END=10929987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 10929988 . A . PASS END=10930008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:26,0 chr2 10930009 . C . PASS END=10930012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 10930013 . A . PASS END=10930015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:16,0 chr2 10930845 . C . PASS END=10930959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:35:0,95,1316:0,95,255:40,0 chr2 10931921 . T . PASS END=10932044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:43:0,113,1495:0,113,255:40,0 chr2 10932045 . T . PASS END=10932051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,111,1665:0,141,255:38,0 chr2 10933222 . T . PASS END=10933232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:29,0 chr2 10933233 . A . PASS END=10933328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:29:0,80,1035:0,80,255:40,0 chr2 10937207 . C . PASS END=10937329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:36:0,87,1305:0,95,255:40,0 chr2 10937330 . C . PASS END=10937333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:26,0 chr2 10937826 . T . PASS END=10937883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,155,255:40,0 chr2 10942625 . C . PASS END=10942649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:43:0,117,1776:0,117,255:40,0 chr2 10942650 . A . PASS END=10942686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:55:0,120,1800:0,152,255:40,0 chr2 10942687 . C T, 49.85 PASS DP=73;MQ=249.41;MQRankSum=7.337;ReadPosRankSum=5.074;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,35,0:0.479,0.000:73:19,17,0:19,18,0:48:85,0,50,1244,1350,2594:255,0,255:37,0:4.9852e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,19,13,22:18,20,25,10 chr2 10942688 . G . PASS END=10942724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:62:0,120,1800:0,151,255:40,0 chr2 10942725 . A . PASS END=10942766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,123,255:40,0 chr2 10950369 . C . PASS END=10950378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,236,255:40,0 chr2 10952804 . C . PASS END=10952822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,737:0,57,255:19,0 chr2 10959400 . C . PASS END=10959480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:95:45:0,95,1729:0,95,255:40,0 chr2 10960897 . A . PASS END=10960898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 10960899 . G . PASS END=10960959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1031:0,81,255:33,0 chr2 10960960 . A . PASS END=10960961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr2 10960962 . A . PASS END=10960968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1218:0,96,255:32,0 chr2 10960969 . T . PASS END=10960969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr2 10960970 . C . PASS END=10960982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1164:0,83,255:31,0 chr2 10960983 . C . PASS END=10960990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr2 10977650 . C . PASS END=10977650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 10977651 . A . PASS END=10977651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 10977652 . C . PASS END=10977660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1241:0,86,255:33,0 chr2 10977661 . C . PASS END=10977661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:32,0 chr2 10977662 . G . PASS END=10977685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1194:0,84,255:40,0 chr2 10977686 . T . PASS END=10977686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1322:0,70,255:38,0 chr2 10977687 . T . PASS END=10977731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:35:0,85,1193:0,85,255:40,0 chr2 11052553 . A . PASS END=11052559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr2 11052560 . G . PASS END=11052569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 11052570 . G . PASS END=11052596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,476:0,42,255:17,0 chr2 11052597 . G . PASS END=11052597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 11052598 . A . PASS END=11052599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,517:0,51,255:17,0 chr2 11052600 . C . PASS END=11052600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 11052601 . T . PASS END=11052606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr2 11052607 . G . PASS END=11052607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 11052608 . C . PASS END=11052613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 11052614 . A . PASS END=11052614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 11052615 . C . PASS END=11052617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr2 11052618 . C . PASS END=11052619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 11052620 . T . PASS END=11052620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,652:0,57,255:19,0 chr2 11052621 . A . PASS END=11052628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:21,0 chr2 11052629 . T . PASS END=11052629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 11052630 . C . PASS END=11052634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,762:0,66,255:22,0 chr2 11052635 . A . PASS END=11052635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,557:0,35,255:21,0 chr2 11052636 . C . PASS END=11052639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr2 11052640 . G . PASS END=11052640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 11052641 . G . PASS END=11052645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 11052646 . G . PASS END=11052646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:20,0 chr2 11052647 . T . PASS END=11052651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 11052652 . C . PASS END=11052652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 11052653 . A . PASS END=11052670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:25,0 chr2 11052671 . T . PASS END=11052709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1094:0,87,255:36,0 chr2 11052710 . T . PASS END=11052710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr2 11052711 . C . PASS END=11052722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:35,0 chr2 11052723 . T . PASS END=11052723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,2 chr2 11052724 . G . PASS END=11052724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1249:0,42,255:33,2 chr2 11052725 . G . PASS END=11052725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr2 11052726 . G . PASS END=11052830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1050:0,82,255:37,0 chr2 11052831 . C . PASS END=11052841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:74:30:0,74,1063:0,74,255:26,0 chr2 11052842 . A . PASS END=11052842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr2 11052843 . G . PASS END=11052915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,893:0,62,255:26,0 chr2 11052916 . T . PASS END=11052917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 11052918 . C . PASS END=11052934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,841:0,72,255:24,0 chr2 11052935 . A . PASS END=11052936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,855:0,41,255:20,0 chr2 11052937 . A . PASS END=11052951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 11052952 . A . PASS END=11052952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 11052953 . A . PASS END=11052982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr2 11052983 . G . PASS END=11052993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:24,0 chr2 11052994 . A . PASS END=11052994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 11052995 . T . PASS END=11052997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 11052998 . T . PASS END=11052998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 11052999 . G . PASS END=11053019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 11053020 . A G, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,7,0:0,16,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,10:0,0,9,14 chr2 11053021 . G . PASS END=11053057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,847:0,66,255:26,0 chr2 11053058 . G . PASS END=11053061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 11053062 . G . PASS END=11053068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr2 11053069 . G . PASS END=11053069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 11053070 . A . PASS END=11053075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1155:0,87,255:30,0 chr2 11053076 . C . PASS END=11053076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11053077 . C . PASS END=11053079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 11053080 . G . PASS END=11053082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 11053083 . G . PASS END=11053083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr2 11053084 . T . PASS END=11053106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1241:0,96,255:34,0 chr2 11053107 . C . PASS END=11053107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:30,0 chr2 11053108 . G . PASS END=11053112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:29,0 chr2 11053113 . C G, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.771;ReadPosRankSum=2.155;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,20,0:0.606,0.000:33:5,4,0:8,16,0:47:85,0,47,715,465,1180:255,0,255:10,0:5.0000e+01,8.9308e-05,4.9752e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,14,6:7,6,8,12 chr2 11053114 . T . PASS END=11053116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 11053117 . T . PASS END=11053119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:33:0,68,1149:0,68,255:26,0 chr2 11053120 . C . PASS END=11053124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1153:0,80,255:28,0 chr2 11053125 . C . PASS END=11053125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 11053126 . A . PASS END=11053132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 11053133 . T . PASS END=11053133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 11053134 . C . PASS END=11053135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11053136 . C . PASS END=11053136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 11053137 . G . PASS END=11053138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11053139 . C . PASS END=11053140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 11053141 . G . PASS END=11053143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11053144 . G . PASS END=11053144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11053145 . T . PASS END=11053146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11053147 . A . PASS END=11053147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 11053148 . T . PASS END=11053150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 11053151 . G . PASS END=11053170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1147:0,90,255:36,0 chr2 11053171 . C . PASS END=11053171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:34,0 chr2 11053172 . T . PASS END=11053221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1280:0,92,255:37,0 chr2 11053222 . A . PASS END=11053222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:30,0 chr2 11053223 . A . PASS END=11053273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1249:0,96,255:35,0 chr2 11053274 . T . PASS END=11053274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1125:0,58,255:33,0 chr2 11053275 . C . PASS END=11053282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1244:0,105,255:37,0 chr2 11053283 . C . PASS END=11053283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 11053284 . A . PASS END=11053321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1302:0,89,255:36,0 chr2 11053322 . T . PASS END=11053322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 11053323 . T . PASS END=11053348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr2 11053349 . T . PASS END=11053365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:27:0,74,1055:0,74,255:26,0 chr2 11053366 . C . PASS END=11053386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 11053387 . A . PASS END=11053387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 11053388 . T . PASS END=11053404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1147:0,90,255:30,0 chr2 11053405 . G . PASS END=11053461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,864:0,72,255:26,0 chr2 11053462 . G . PASS END=11053462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 11053463 . C . PASS END=11053489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:24,0 chr2 11053490 . T . PASS END=11053490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 11053491 . C . PASS END=11053520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,970:0,75,255:26,0 chr2 11053521 . A . PASS END=11053521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:24,0 chr2 11053522 . C . PASS END=11053534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr2 11053535 . T . PASS END=11053546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1080:0,84,255:29,0 chr2 11053547 . C . PASS END=11053547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 11053548 . A . PASS END=11053560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr2 11053561 . G . PASS END=11053562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:26,0 chr2 11053563 . C . PASS END=11053571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,912:0,81,255:30,0 chr2 11053572 . C . PASS END=11053587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:26:0,66,990:0,78,255:26,0 chr2 11053588 . G . PASS END=11053597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 11053598 . A . PASS END=11053598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr2 11053599 . T . PASS END=11053599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 11053600 . C . PASS END=11053601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:28,0 chr2 11053602 . A . PASS END=11053605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 11053606 . A . PASS END=11053606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,944:0,73,255:28,0 chr2 11053607 . C . PASS END=11053614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:32,0 chr2 11053615 . A . PASS END=11053615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1125:0,68,255:30,0 chr2 11053616 . A . PASS END=11053618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 11053619 . G . PASS END=11053619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:29,0 chr2 11053620 . C . PASS END=11053620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:30,0 chr2 11053621 . A . PASS END=11053641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:31,0 chr2 11053642 . G . PASS END=11053643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:32:0,69,1170:0,69,255:27,0 chr2 11053644 . C . PASS END=11053656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,86,255:30,0 chr2 11053657 . A . PASS END=11053659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 11053660 . A . PASS END=11053664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1101:0,90,255:30,0 chr2 11053665 . C . PASS END=11053665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 11053666 . G . PASS END=11053676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 11053677 . C . PASS END=11053677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr2 11053678 . A . PASS END=11053678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 11053679 . T . PASS END=11053680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1040:0,62,255:27,0 chr2 11053681 . T . PASS END=11053682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 11053683 . C . PASS END=11053683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 11053684 . C . PASS END=11053697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1157:0,82,255:31,0 chr2 11053698 . G . PASS END=11053698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:29,0 chr2 11053699 . G . PASS END=11053702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1135:0,80,255:31,0 chr2 11053703 . A . PASS END=11053709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 11053710 . C . PASS END=11053720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1078:0,77,255:26,0 chr2 11053721 . G . PASS END=11053722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11053723 . T . PASS END=11053725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,948:0,68,255:26,0 chr2 11053726 . T . PASS END=11053728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11053729 . T . PASS END=11053739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1078:0,74,255:26,0 chr2 11053740 . C T, 50.00 PASS DP=29;MQ=249.66;MQRankSum=3.432;ReadPosRankSum=1.041;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,17,0:0.586,0.000:29:5,6,0:7,11,0:48:85,0,48,547,429,976:255,0,255:11,0:5.0000e+01,7.5847e-05,5.1255e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,6,11:7,5,13,4 chr2 11053741 . G . PASS END=11053743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 11053744 . A . PASS END=11053757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,956:0,70,255:27,0 chr2 11053758 . C . PASS END=11053758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:25,0 chr2 11053759 . C . PASS END=11053777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,893:0,64,255:26,0 chr2 11053778 . T . PASS END=11053780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 11053781 . T . PASS END=11053781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:23,0 chr2 11053782 . C . PASS END=11053784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 11053785 . G . PASS END=11053785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11053786 . T . PASS END=11053798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr2 11053799 . A . PASS END=11053799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 11053800 . G . PASS END=11053800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 11053801 . C . PASS END=11053801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr2 11053802 . G . PASS END=11053802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 11053803 . C . PASS END=11053803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 11053804 . G . PASS END=11053806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 11053807 . C . PASS END=11053807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 11053808 . T . PASS END=11053819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:21,0 chr2 11053820 . C . PASS END=11053836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,715:0,49,255:19,0 chr2 11053837 . C . PASS END=11053837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 11053838 . T . PASS END=11053839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 11053840 . A . PASS END=11053846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11053847 . T . PASS END=11053847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:19,0 chr2 11053848 . C . PASS END=11053848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 11053849 . A . PASS END=11053849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 11053850 . A . PASS END=11053856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:21,0 chr2 11053857 . C . PASS END=11053857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 11053858 . A . PASS END=11053863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr2 11053864 . G . PASS END=11053865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 11053866 . C . PASS END=11053888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,878:0,72,255:24,0 chr2 11053889 . G . PASS END=11053889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:22,0 chr2 11053890 . C . PASS END=11053930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:24,0 chr2 11053931 . A . PASS END=11053940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,836:0,53,255:19,0 chr2 11053941 . C . PASS END=11053943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 11053944 . C . PASS END=11053944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 11053945 . A . PASS END=11053947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr2 11053948 . A . PASS END=11053949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 11053950 . C . PASS END=11053954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 11053955 . T . PASS END=11053955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 11053956 . G . PASS END=11053957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11053958 . A . PASS END=11053961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 11053962 . C . PASS END=11053962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 11053963 . T . PASS END=11053963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 11053964 . C . PASS END=11053969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,841:0,69,255:24,0 chr2 11053970 . G . PASS END=11053970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 11053971 . C . PASS END=11053975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,930:0,72,255:24,0 chr2 11053976 . C . PASS END=11053976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:23,0 chr2 11053977 . C . PASS END=11054019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr2 11054020 . C . PASS END=11054020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 11054021 . T . PASS END=11054028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,892:0,72,255:24,0 chr2 11054029 . T . PASS END=11054029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 11054030 . G . PASS END=11054032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 11054033 . A . PASS END=11054037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 11273461 . A . PASS END=11273472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 11273473 . C . PASS END=11273473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 11273474 . C . PASS END=11273480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 11273481 . T . PASS END=11273481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:5,0 chr2 11273482 . G . PASS END=11273482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 11273483 . G . PASS END=11273483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 11273484 . G . PASS END=11273502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,180:6,0 chr2 11273503 . G . LowGQ END=11273516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:4:0,0,94:0,0,96:3,0 chr2 11273517 . G . PASS END=11273529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 11273530 . C . LowGQ END=11273530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 11273531 . C . PASS END=11273550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,103:0,12,103:6,0 chr2 11273551 . G . PASS END=11273559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 11273560 . G . PASS END=11273563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 11273564 . G . PASS END=11273573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,243:9,0 chr2 11273574 . C . PASS END=11273577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 11273578 . A . PASS END=11273580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11273581 . G . PASS END=11273589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 11273590 . G . PASS END=11273590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 11273591 . G . PASS END=11273591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 11273592 . T . PASS END=11273592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 11273593 . G . PASS END=11273609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr2 11273610 . G . PASS END=11273611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 11273612 . C . PASS END=11273626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 11273627 . G . PASS END=11273658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:19,0 chr2 11273659 . C . PASS END=11273676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 11273677 . C . PASS END=11273717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,46,255:19,0 chr2 11280636 . G . PASS END=11280675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:66:0,120,1800:0,182,255:40,0 chr2 11284046 . G . PASS END=11284062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 11284063 . T . PASS END=11284063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 11284064 . G . PASS END=11284082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 11284083 . T . PASS END=11284083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr2 11284084 . G . PASS END=11284084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 11284085 . C . PASS END=11284085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 11284086 . C . PASS END=11284090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 11284091 . T . PASS END=11284102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 11284103 . G . PASS END=11284149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:17,0 chr2 11284150 . C . PASS END=11284150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 11284151 . C . PASS END=11284196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 11284197 . C . PASS END=11284198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,531:0,37,255:17,0 chr2 11284199 . C . PASS END=11284200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 11284201 . G . PASS END=11284201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:17,0 chr2 11284202 . A . PASS END=11284210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr2 11284211 . C . PASS END=11284211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 11284212 . T . PASS END=11284212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 11284213 . G . PASS END=11284213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 11284214 . G . PASS END=11284218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:17,0 chr2 11284219 . C . PASS END=11284219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 11284220 . C . PASS END=11284227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 11284228 . G . PASS END=11284228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 11284229 . C . PASS END=11284232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr2 11284233 . T . PASS END=11284233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 11284234 . C . PASS END=11284237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 11295344 . A . PASS END=11295353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr2 11295354 . T . PASS END=11295355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 11295356 . C . PASS END=11295357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 11295358 . A . LowGQ END=11295360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:0,0,168:5,0 chr2 11295361 . A . PASS END=11295363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr2 11295364 . G . PASS END=11295364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 11295365 . A . PASS END=11295366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 11295367 . C . PASS END=11295367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 11295368 . G . PASS END=11295378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr2 11295379 . G . PASS END=11295379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:3,0 chr2 11295380 . G . PASS END=11295380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr2 11295381 . C . LowGQ END=11295383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,147:13,0,168:4,0 chr2 11295384 . G . PASS END=11295385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 11295386 . A . LowGQ END=11295391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:5:0,0,94:0,0,118:4,0 chr2 11295392 . G . PASS END=11295392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 11295658 . C . PASS END=11295695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr2 11295696 . G . PASS END=11295748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:13,0 chr2 11295749 . C . PASS END=11295775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr2 11295776 . G . PASS END=11295794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,364:0,30,255:13,0 chr2 11295795 . T . PASS END=11295795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr2 11295796 . T . PASS END=11295808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 11295809 . T . PASS END=11295815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 11300592 . A . PASS END=11300592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:25,0 chr2 11300593 . T . PASS END=11300593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 11300594 . T . PASS END=11300594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 11300595 . C . PASS END=11300595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 11300596 . C . PASS END=11300596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 11300597 . T . PASS END=11300597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 11300598 . G . PASS END=11300601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1001:0,84,255:28,0 chr2 11300602 . T . PASS END=11300602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 11300603 . T . PASS END=11300604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11300605 . C . PASS END=11300605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 11300606 . T . PASS END=11300609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11300610 . G . PASS END=11300615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:25,0 chr2 11300616 . G . PASS END=11300637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:37,0 chr2 11300638 . C . PASS END=11300638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:35,0 chr2 11300639 . T . PASS END=11300664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:95:37:0,95,1319:0,95,255:37,0 chr2 11300665 . A . PASS END=11300665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:34,0 chr2 11300666 . T . PASS END=11300674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:37:0,85,1482:0,85,255:36,0 chr2 11300751 . A . PASS END=11300769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,151,255:40,0 chr2 11300770 . T . PASS END=11300831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,111,1665:0,120,255:40,0 chr2 11300832 . G . PASS END=11300833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 11304330 . A . PASS END=11304387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,128,255:40,0 chr2 11312051 . A . PASS END=11312172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:37:0,98,1348:0,98,255:40,0 chr2 11312877 . G . PASS END=11312877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 11312878 . G . PASS END=11312882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr2 11312883 . G . PASS END=11312911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,70,255:26,0 chr2 11315094 . C . PASS END=11315135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:76:0,120,1800:0,158,255:40,0 chr2 11317863 . T . PASS END=11317954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:55:0,120,1800:0,165,255:40,0 chr2 11323563 . T . PASS END=11323566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:117:0,120,1800:0,255,255:40,0 chr2 11324805 . T . PASS END=11324895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:82:0,120,1800:0,185,255:40,0 chr2 11326998 . T . PASS END=11327049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:69:0,120,1800:0,208,255:40,0 chr2 11332274 . C . PASS END=11332283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,64,255:25,0 chr2 11332284 . T . PASS END=11332487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,1031:0,81,255:40,0 chr2 11332577 . C . PASS END=11332817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:33:0,84,1225:0,89,255:40,0 chr2 11332818 . T . PASS END=11332818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 11332819 . C . PASS END=11332821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 11332822 . T . PASS END=11332822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 11332823 . C . PASS END=11332824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 11332825 . T . PASS END=11332832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,77,255:25,0 chr2 11332833 . C . PASS END=11332838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:25:0,48,720:0,74,255:19,0 chr2 11333905 . C . PASS END=11333983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,157,255:40,0 chr2 11334382 . T . PASS END=11334470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:75:0,120,1800:0,204,255:40,0 chr2 11335081 . C . PASS END=11335151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:67:0,120,1800:0,183,255:40,2 chr2 11337306 . C . PASS END=11337314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11337315 . C . PASS END=11337315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 11337316 . A . PASS END=11337317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11337318 . C . PASS END=11337318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 11337319 . A . PASS END=11337327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:29,0 chr2 11337328 . A . PASS END=11337328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 11337329 . G . PASS END=11337474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:88:33:0,88,1189:0,88,255:40,0 chr2 11337652 . T . PASS END=11337831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:43:0,99,1485:0,113,255:40,2 chr2 11338617 . T . PASS END=11338711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,129,255:40,0 chr2 11338807 . G . PASS END=11338900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:65:0,120,1800:0,179,255:40,0 chr2 11341083 . A . PASS END=11341269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:41:0,102,1530:0,120,255:40,0 chr2 11341436 . C . PASS END=11341539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:68:0,120,1800:0,180,255:40,0 chr2 11342178 . T . PASS END=11342247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,105,1575:0,121,255:40,0 chr2 11347852 . T . PASS END=11348036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,121,255:40,0 chr2 11348413 . A . PASS END=11348414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 11348415 . C . PASS END=11348415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr2 11348416 . C . PASS END=11348416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 11348417 . T . PASS END=11348417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 11348418 . C . PASS END=11348418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 11348419 . A . PASS END=11348419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 11348420 . T . PASS END=11348424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr2 11348425 . C . PASS END=11348425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 11348426 . A . PASS END=11348426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 11348427 . C . PASS END=11348427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:29,0 chr2 11348428 . A . PASS END=11348540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1050:0,86,255:40,0 chr2 11348541 . A . PASS END=11348543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 11348544 . T . PASS END=11348547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 11348548 . T . PASS END=11348549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 11348550 . C . PASS END=11348555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11348556 . A . PASS END=11348573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,915:0,67,255:25,0 chr2 11351807 . C . PASS END=11351947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:40:0,81,1215:0,104,255:40,0 chr2 11351948 . T . PASS END=11351964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,87,255:26,0 chr2 11351965 . T . PASS END=11351965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:24,0 chr2 11351966 . C . PASS END=11351966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:23,0 chr2 11354483 . C . PASS END=11354589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,117,1755:0,140,255:40,0 chr2 11354966 . C . PASS END=11354983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,825:0,62,255:26,0 chr2 11354984 . T . PASS END=11354985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr2 11354986 . T . PASS END=11354986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 11354987 . C . PASS END=11354996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 11354997 . G . PASS END=11354997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 11354998 . G . PASS END=11355003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1155:0,90,255:30,0 chr2 11355004 . T . PASS END=11355004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 11355005 . C . PASS END=11355190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:31:0,86,1083:0,86,255:40,0 chr2 11355191 . G . PASS END=11355191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr2 11355192 . T . PASS END=11355195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1344:0,111,255:37,0 chr2 11355196 . G . PASS END=11355196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:34,0 chr2 11355197 . C . PASS END=11355210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,92,255:35,0 chr2 11355211 . A . PASS END=11355212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:24,0 chr2 11355447 . T . PASS END=11355538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:82:0,120,1800:0,205,255:40,0 chr2 11355636 . C . PASS END=11355766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:89:35:0,89,1263:0,89,255:40,0 chr2 11355767 . G . PASS END=11355771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,88,255:25,0 chr2 11356284 . C . PASS END=11356332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:54:0,120,1800:0,129,255:40,0 chr2 11357216 . T . PASS END=11357295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,108,1696:0,108,255:40,0 chr2 11358572 . T . PASS END=11358592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:91:0,120,1800:0,255,255:40,0 chr2 11359092 . T . PASS END=11359152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:75:0,120,1800:0,184,255:40,0 chr2 11361324 . A . PASS END=11361325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1258:0,91,255:35,0 chr2 11361326 . A . PASS END=11361326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1108:0,77,255:35,0 chr2 11361327 . T . PASS END=11361472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:37:0,81,1215:0,101,255:40,0 chr2 11361473 . A . PASS END=11361483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,87,255:26,0 chr2 11362209 . T . PASS END=11362300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:58:0,120,1800:0,158,255:40,0 chr2 11364448 . C . PASS END=11364586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,137,255:40,0 chr2 11367380 . C . PASS END=11367513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:35:0,81,1215:0,102,255:40,0 chr2 11367514 . A . PASS END=11367524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:31:0,72,1080:0,89,255:26,0 chr2 11375828 . T . PASS END=11376049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:33:0,81,1211:0,88,255:40,0 chr2 11376050 . C . PASS END=11376050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 11376051 . A . PASS END=11376051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:40:0,84,1260:0,120,255:28,0 chr2 11376052 . T . PASS END=11376067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:25:0,60,900:0,71,255:26,0 chr2 11376068 . A . PASS END=11376068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:19,0 chr2 11376069 . T . PASS END=11376069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,71,255:20,0 chr2 11376070 . C . PASS END=11376077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:20:0,48,720:0,60,255:19,0 chr2 11376078 . G . PASS END=11376078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:16,0 chr2 11376079 . C . PASS END=11376083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:17,0 chr2 11376084 . A . PASS END=11376084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,568:0,27,255:15,0 chr2 11376085 . A . PASS END=11376088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,631:0,43,255:17,0 chr2 11389787 . C . PASS END=11389924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:43:0,90,1507:0,90,255:40,0 chr2 11426665 . C . PASS END=11426765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:61:0,120,1800:0,156,255:40,0 chr2 11427781 . A . PASS END=11427862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:66:0,120,1800:0,177,255:40,0 chr2 11484122 . C . PASS END=11484122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 11484123 . A . PASS END=11484123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 11484124 . G . PASS END=11484129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:17,0 chr2 11484130 . T . PASS END=11484130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr2 11484131 . C . PASS END=11484139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,629:0,44,255:19,0 chr2 11484140 . G . PASS END=11484140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 11484141 . A . PASS END=11484141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 11484142 . T . PASS END=11484176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:26,0 chr2 11484177 . T . PASS END=11484177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr2 11484178 . T . PASS END=11484203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,65,255:26,0 chr2 11484204 . T . PASS END=11484227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,653:0,43,255:19,0 chr2 11484228 . C . PASS END=11484228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr2 11484229 . C . PASS END=11484262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:19,0 chr2 11586603 . T . PASS END=11586641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:53:0,120,1800:0,132,255:40,0 chr2 11586642 . A . PASS END=11586649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,164,255:40,0 chr2 11587753 . C . PASS END=11587887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1260:0,96,255:40,0 chr2 11587888 . C . PASS END=11587894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:34:0,60,900:0,102,255:20,0 chr2 11587895 . A . PASS END=11587900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:20:0,51,765:0,60,255:19,0 chr2 11589319 . T . PASS END=11589321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 11589322 . T . PASS END=11589322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11589323 . A . PASS END=11589324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11589325 . C . PASS END=11589332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 11589333 . T . PASS END=11589345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:17,0 chr2 11589346 . T . PASS END=11589346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 11589347 . G . PASS END=11589360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr2 11589361 . A . PASS END=11589361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11589362 . C A, 109.74 PASS DP=21;MQ=246.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,15,0:0,6,0:60:148,63,0,785,63,785:255,63,0:0,0:1.0974e+02,5.9741e+01,4.6595e-06,4.5000e+02,9.4511e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,10:0,0,13,8 chr2 11589363 . C . PASS END=11589372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr2 11589373 . G . PASS END=11589428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1135:0,83,255:38,0 chr2 11589429 . A G, 154.89 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1367,108,1367:255,108,0:0,0:1.5489e+02,1.0489e+02,0.0000e+00,4.5000e+02,1.3966e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,16:0,0,24,12 chr2 11589430 . G . PASS END=11589466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1233:0,89,255:36,0 chr2 11589467 . C . PASS END=11589519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:40:0,90,1498:0,90,255:40,0 chr2 11589520 . T . PASS END=11589520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:39,0 chr2 11589521 . G . PASS END=11589623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:35:0,80,1312:0,80,255:40,0 chr2 11590134 . C . PASS END=11590237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:35:0,84,1260:0,92,255:40,0 chr2 11590238 . G . PASS END=11590252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:65:26:0,65,984:0,65,255:26,0 chr2 11591777 . C . PASS END=11591932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:41:0,90,1377:0,90,255:40,0 chr2 11593708 . A . PASS END=11593710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 11593711 . C . PASS END=11593919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:27:0,81,978:0,81,255:40,0 chr2 11593920 . A . PASS END=11593920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1451:0,63,255:28,0 chr2 11593921 . G . PASS END=11593924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:32,0 chr2 11595596 . C . PASS END=11595600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 11597305 . T . PASS END=11597359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:70:0,120,1800:0,166,255:40,0 chr2 11598407 . A . PASS END=11598418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,131,255:40,0 chr2 11598433 . T . PASS END=11598477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:39:0,91,1395:0,91,255:40,0 chr2 11605898 . C . PASS END=11605920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,548:0,45,255:18,0 chr2 11605921 . G . PASS END=11605921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr2 11605922 . G . PASS END=11605935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:17,0 chr2 11605936 . G . PASS END=11605936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 11605937 . G . PASS END=11605983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 11605984 . T . PASS END=11605987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 11605988 . C . PASS END=11605993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 11605994 . C . PASS END=11605997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 11605998 . T . PASS END=11605998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 11605999 . G . PASS END=11606005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 11696741 . A . PASS END=11696747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 11696748 . A . PASS END=11696748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:22,0 chr2 11696749 . T . PASS END=11696753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr2 11696754 . A . PASS END=11696757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11696758 . T . PASS END=11696758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 11696759 . G . PASS END=11696765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr2 11696766 . T . PASS END=11696766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:29,0 chr2 11696767 . G . PASS END=11696856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1186:0,89,255:39,0 chr2 11696857 . G . PASS END=11696857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:29,0 chr2 11696858 . C . PASS END=11696870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:32:0,85,1135:0,85,255:31,0 chr2 11696871 . C . PASS END=11696895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 11696896 . A . PASS END=11696897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,810:0,53,255:18,0 chr2 11702589 . G . PASS END=11702605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1343:0,81,255:40,0 chr2 11702606 . A . PASS END=11702606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1319:0,62,255:37,0 chr2 11702607 . A . PASS END=11702623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:41:0,90,1328:0,90,255:40,0 chr2 11702624 . G . PASS END=11702660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,115,1424:0,115,255:40,0 chr2 11702661 . A C, 46.45 PASS DP=45;MQ=248.28;MQRankSum=4.367;ReadPosRankSum=1.379;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,18,0:0.400,0.000:45:12,10,0:15,8,0:46:81,0,50,609,919,1528:255,0,255:24,0:4.6446e+01,1.2011e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,21,8,10:13,14,12,6 chr2 11702662 . C . PASS END=11702689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:35:0,87,1305:0,92,255:40,0 chr2 11702690 . G . PASS END=11702691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr2 11702692 . A . PASS END=11702692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 11702693 . T . PASS END=11702698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:33:0,63,945:0,99,255:25,0 chr2 11702699 . A . PASS END=11702704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:21,0 chr2 11702705 . G . PASS END=11702708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 11706606 . G . PASS END=11706613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 11706614 . C . PASS END=11706614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 11706615 . A . PASS END=11706625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,817:0,62,255:26,0 chr2 11706626 . G . PASS END=11706655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr2 11706656 . C . PASS END=11706659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 11706660 . T . PASS END=11706660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:27,0 chr2 11706661 . G . PASS END=11706688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1062:0,87,255:30,0 chr2 11706689 . G . PASS END=11706690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 11706691 . G . PASS END=11706691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 11706692 . G . PASS END=11706692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:27,0 chr2 11706693 . T C, 50.00 PASS DP=29;MQ=249.83;MQRankSum=4.561;ReadPosRankSum=3.950;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,15,0:0.517,0.000:29:6,6,0:8,9,0:48:85,0,50,534,493,1027:255,0,255:14,0:5.0000e+01,6.5492e-05,5.2929e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,6,9:6,8,11,4 chr2 11706694 . C . PASS END=11706694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 11706695 . A . PASS END=11706695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 11706696 . A . PASS END=11706707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1003:0,87,255:31,0 chr2 11706708 . T . PASS END=11706708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 11706709 . G . PASS END=11706711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 11706712 . G . PASS END=11706713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 11706714 . A . PASS END=11706716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 11706717 . A . PASS END=11706718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1061:0,60,255:25,0 chr2 11706719 . C . PASS END=11706720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 11706721 . C . PASS END=11706729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,87,255:26,0 chr2 11706730 . C T, 44.09 PASS DP=29;MQ=249.83;MQRankSum=4.336;ReadPosRankSum=-0.941;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,10,0:0.345,0.000:29:11,5,0:8,5,0:44:79,0,50,322,593,916:255,0,255:18,0:4.4091e+01,1.9104e-04,5.3000e+01,3.2241e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,3,7:10,9,2,8 chr2 11706731 . G . PASS END=11706742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr2 11706743 . A . PASS END=11706744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 11706745 . G . PASS END=11706746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 11706747 . T . PASS END=11706747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:19,0 chr2 11706748 . C . PASS END=11706751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 11706752 . C . PASS END=11706755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,737:0,47,255:19,0 chr2 11706756 . A . PASS END=11706756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11706757 . T . PASS END=11706759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 11706760 . C . PASS END=11706763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 11706764 . G . PASS END=11706767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,50,255:19,0 chr2 11706768 . A . PASS END=11706782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 11716479 . G . PASS END=11716479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1435:0,114,255:38,0 chr2 11716480 . T . PASS END=11716661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:97:38:0,97,1232:0,97,255:40,0 chr2 11718423 . A . PASS END=11718432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1074:0,93,255:31,0 chr2 11718433 . C . PASS END=11718433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 11718434 . C . PASS END=11718462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1119:0,89,255:35,0 chr2 11718463 . T . PASS END=11718463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:32,0 chr2 11718464 . T . PASS END=11718531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1249:0,89,255:38,0 chr2 11718532 . C . PASS END=11718532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:31,0 chr2 11718533 . A . PASS END=11718539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:30,0 chr2 11718540 . T . PASS END=11718553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:25,0 chr2 11718554 . G . PASS END=11718557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr2 11720830 . G . PASS END=11720832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 11720833 . C . PASS END=11720833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 11720834 . A . PASS END=11720840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr2 11720841 . G . PASS END=11720842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:30,0 chr2 11720843 . T . PASS END=11720965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1138:0,87,255:40,0 chr2 11720966 . T . PASS END=11720966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 11720967 . G . PASS END=11720974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 11720975 . T . PASS END=11720975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 11720976 . G . PASS END=11720977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11720978 . C . PASS END=11720978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11720979 . C . PASS END=11720979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 11720980 . G . PASS END=11720991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 11720992 . C . PASS END=11720995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 11720996 . T . PASS END=11720996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 11720997 . C . PASS END=11721005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1019:0,84,255:30,0 chr2 11721006 . G . PASS END=11721006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr2 11721007 . C . PASS END=11721008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 11721009 . A . PASS END=11721009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:25,0 chr2 11721010 . A . PASS END=11721117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1078:0,83,255:35,0 chr2 11721118 . T . PASS END=11721121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 11721122 . T . PASS END=11721129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 11721130 . C . PASS END=11721130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 11721131 . A . PASS END=11721135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 11721136 . C . PASS END=11721138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 11721139 . G . PASS END=11721139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr2 11721140 . T . PASS END=11721149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr2 11725287 . G . PASS END=11725400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:40:0,90,1350:0,107,255:40,1 chr2 11725888 . A . PASS END=11725888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,680:0,44,255:19,0 chr2 11725889 . G . PASS END=11725900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,729:0,60,255:25,0 chr2 11725901 . G . PASS END=11725915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr2 11725916 . G . PASS END=11725916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 11725917 . G . PASS END=11726006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1048:0,80,255:33,0 chr2 11726007 . A . PASS END=11726016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 11726017 . C . PASS END=11726019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 11726020 . T . PASS END=11726028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 11726029 . A . PASS END=11726029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,872:0,50,255:21,0 chr2 11726030 . A . PASS END=11726031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr2 11727508 . T . PASS END=11727508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr2 11727509 . A . PASS END=11727511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 11727512 . T . PASS END=11727512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 11727513 . G . PASS END=11727517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 11727518 . T . PASS END=11727518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:21,0 chr2 11727519 . G . PASS END=11727544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,906:0,62,255:26,0 chr2 11727545 . T . PASS END=11727560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1030:0,68,255:24,0 chr2 11727561 . T . PASS END=11727578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:19:0,54,714:0,57,255:19,0 chr2 11728811 . A . PASS END=11729017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:32:0,87,1305:0,95,255:40,0 chr2 11729018 . A . PASS END=11729018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:27,0 chr2 11729019 . T . PASS END=11729025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 11729026 . C . PASS END=11729026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr2 11729027 . C . PASS END=11729030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 11729031 . T . PASS END=11729050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,61,255:26,0 chr2 11729051 . C . PASS END=11729057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:21:0,54,810:0,59,255:19,0 chr2 11731522 . C . PASS END=11731550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,189,255:40,0 chr2 11732902 . C . PASS END=11732919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr2 11732920 . T . PASS END=11732920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 11732921 . G . PASS END=11732935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 11732936 . G . PASS END=11732936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 11732937 . C . PASS END=11732979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,336:0,33,255:12,0 chr2 11732980 . T . LowGQ END=11732980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr2 11732981 . C . PASS END=11732984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 11732985 . C . LowGQ END=11732985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:9,0 chr2 11732986 . A . PASS END=11732992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 11732993 . G . PASS END=11733000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11733001 . C . PASS END=11733017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 11733018 . C . PASS END=11733018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 11733019 . C . PASS END=11733057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 11733058 . T . PASS END=11733086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,438:0,42,255:16,0 chr2 11733087 . T . PASS END=11733087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 11733088 . C . PASS END=11733098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 11733099 . A . PASS END=11733099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:15,0 chr2 11733100 . G . PASS END=11733101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 11733102 . G . PASS END=11733102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 11733103 . T . PASS END=11733107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 11733108 . G . PASS END=11733109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 11733110 . C . PASS END=11733114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 11733115 . A . PASS END=11733115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:14,0 chr2 11733116 . G . PASS END=11733116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 11733117 . T . PASS END=11733126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,629:0,40,255:18,0 chr2 11733127 . C . PASS END=11733127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:18,0 chr2 11733128 . C . PASS END=11733128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,639:0,57,255:19,0 chr2 11733129 . C . PASS END=11733130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:17,0 chr2 11733131 . G . PASS END=11733137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr2 11733138 . G . PASS END=11733138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,0 chr2 11733139 . G . PASS END=11733140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 11733141 . C . PASS END=11733141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,548:0,26,255:17,0 chr2 11733142 . T . PASS END=11733147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,570:0,40,255:19,0 chr2 11733148 . A . PASS END=11733148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:17,0 chr2 11733149 . G . PASS END=11733149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 11733150 . A . PASS END=11733151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,534:0,29,255:18,0 chr2 11733152 . G . PASS END=11733152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 11733153 . T . PASS END=11733155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr2 11733156 . C . PASS END=11733156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,535:0,10,255:17,0 chr2 11733157 . G . PASS END=11733164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,601:0,43,255:18,0 chr2 11733165 . G . PASS END=11733165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,629:0,21,255:17,0 chr2 11733166 . T . PASS END=11733168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 11733169 . A . PASS END=11733169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,553:0,12,255:18,0 chr2 11733170 . G . PASS END=11733171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 11733172 . G . PASS END=11733178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,593:0,43,255:19,0 chr2 11733179 . T . PASS END=11733179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,568:0,27,255:17,0 chr2 11733180 . G . PASS END=11733180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:4:20:0,4,471:0,4,255:17,0 chr2 11733181 . C . PASS END=11733195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,570:0,40,255:19,0 chr2 11733196 . T . PASS END=11733196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 11733197 . G . PASS END=11733198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 11733199 . T . PASS END=11733199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 11733200 . C . PASS END=11733206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr2 11733207 . T . PASS END=11733227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 11733228 . A . PASS END=11733228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 11733229 . T . PASS END=11733240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 11733241 . T . PASS END=11733252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 11735377 . G . PASS END=11735505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,105,1575:0,108,255:40,0 chr2 11736237 . A . PASS END=11736335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:33:0,83,1195:0,83,255:40,0 chr2 11736336 . T . PASS END=11736336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr2 11736337 . G . PASS END=11736349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:31,0 chr2 11736350 . A . PASS END=11736354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 11736355 . G . PASS END=11736365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:26:0,42,630:0,74,255:18,0 chr2 11737907 . G . PASS END=11738014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:29:0,86,1070:0,86,255:39,0 chr2 11738015 . T . PASS END=11738016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:33,0 chr2 11738017 . G . PASS END=11738039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1255:0,89,255:34,0 chr2 11738040 . T . PASS END=11738040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1226:0,69,255:33,0 chr2 11738041 . C . PASS END=11738053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1319:0,95,255:36,0 chr2 11738054 . C . PASS END=11738065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,89,255:35,0 chr2 11738066 . T . PASS END=11738066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:28,0 chr2 11738067 . G . PASS END=11738070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 11738071 . T . PASS END=11738072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:27,0 chr2 11738073 . C . PASS END=11738077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11738078 . A . PASS END=11738086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,68,255:24,0 chr2 11738087 . T . PASS END=11738089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:25:0,57,855:0,75,255:19,0 chr2 11738090 . A . PASS END=11738090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:19,0 chr2 11738091 . T C, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,15,0:0,11,0:75:163,78,0,1007,78,1007:255,78,0:0,0:1.2525e+02,7.5253e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,17:0,0,16,10 chr2 11738092 . G . PASS END=11738092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 11738093 . T . PASS END=11738098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,853:0,56,255:19,0 chr2 11738099 . A . PASS END=11738101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 11738102 . C . PASS END=11738104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 11738806 . G . PASS END=11738980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:37:0,90,1304:0,90,255:40,0 chr2 11738981 . T . PASS END=11738981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1351:0,73,255:33,0 chr2 11738982 . G . PASS END=11738986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1350:0,104,255:31,0 chr2 11740926 . T . PASS END=11741109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:84:35:0,84,1260:0,98,255:40,0 chr2 11741110 . T . PASS END=11741119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,990:0,89,255:26,0 chr2 11741120 . A . PASS END=11741120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:22,0 chr2 11741121 . T . PASS END=11741121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 11742532 . G . PASS END=11742668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:42:0,106,1739:0,106,255:40,0 chr2 11743480 . A . PASS END=11743525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,151,255:40,0 chr2 11750814 . G . PASS END=11750828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,499:0,45,255:18,0 chr2 11750829 . C . PASS END=11750829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 11750830 . A . PASS END=11750843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 11750844 . G . PASS END=11750855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,663:0,63,255:21,0 chr2 11750856 . C . PASS END=11750856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 11750857 . G . PASS END=11750897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:26,0 chr2 11750898 . C . PASS END=11750902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 11750903 . A . PASS END=11750903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 11750904 . G . PASS END=11750910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1019:0,81,255:29,0 chr2 11750911 . A . PASS END=11750912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11750913 . C . PASS END=11750959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr2 11750960 . C . PASS END=11750981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,1008:0,68,255:26,0 chr2 11750982 . C . PASS END=11750982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 11750983 . C . PASS END=11750988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 11750989 . C . PASS END=11750991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 11750992 . A . PASS END=11750993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 11750994 . G . PASS END=11750996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 11750997 . C . PASS END=11750998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 11750999 . T . PASS END=11751000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 11751001 . C . PASS END=11751001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 11751002 . T . PASS END=11751016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr2 11751017 . C . PASS END=11751018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:29,0 chr2 11751019 . C . PASS END=11751020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 11751021 . C . PASS END=11751021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 11751022 . C . PASS END=11751027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 11751028 . G . PASS END=11751028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr2 11751029 . T . PASS END=11751088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1155:0,80,255:36,0 chr2 11751089 . A . PASS END=11751089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 11751090 . G . PASS END=11751093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1249:0,89,255:35,0 chr2 11751094 . A . PASS END=11751094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:31,0 chr2 11751095 . T . PASS END=11751110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1141:0,80,255:32,0 chr2 11751111 . C . PASS END=11751112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:29,0 chr2 11751113 . C . PASS END=11751113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:26,0 chr2 11751114 . A . PASS END=11751114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:26,0 chr2 11751115 . G . PASS END=11751119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:27,0 chr2 11751120 . C . PASS END=11751120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 11751121 . A . PASS END=11751122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:25,0 chr2 11751123 . C . PASS END=11751129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,74,255:26,0 chr2 11751130 . A . PASS END=11751130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:21,0 chr2 11751131 . A . PASS END=11751140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,832:0,61,255:22,0 chr2 11751141 . A . PASS END=11751141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 11751142 . A . PASS END=11751142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,774:0,17,255:20,0 chr2 11751143 . A . PASS END=11751143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,689:0,41,255:21,0 chr2 11751144 . G . PASS END=11751144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 11751145 . C . PASS END=11751146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,768:0,41,255:21,0 chr2 11751147 . G . PASS END=11751147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 11751148 . C . PASS END=11751148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:19,0 chr2 11751149 . T . PASS END=11751149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 11751150 . C . PASS END=11751153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr2 11752621 . A . PASS END=11752632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:26,0 chr2 11752633 . A . PASS END=11752634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 11752635 . T C, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,17,0:0,10,0:78:166,81,0,1039,81,1039:255,81,0:0,0:1.2826e+02,7.8259e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,13:0,0,12,15 chr2 11752636 . G . PASS END=11752672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,992:0,81,255:36,0 chr2 11752673 . T . PASS END=11752732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1202:0,83,255:35,0 chr2 11752733 . C . PASS END=11752736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:24,0 chr2 11755217 . G . PASS END=11755220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 11755221 . T . PASS END=11755225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 11755226 . G . PASS END=11755243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr2 11755244 . G . PASS END=11755250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,654:0,60,255:20,0 chr2 11755251 . T . PASS END=11755251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 11755252 . C . PASS END=11755268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:22:0,64,829:0,64,255:26,0 chr2 11755269 . A . PASS END=11755269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 11755270 . C . PASS END=11755272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 11755273 . C . PASS END=11755275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11755276 . T . PASS END=11755276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 11755277 . G . PASS END=11755278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11755279 . A . PASS END=11755280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11755281 . C . PASS END=11755281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11755282 . A . PASS END=11755288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 11755289 . G . PASS END=11755292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 11755293 . C . PASS END=11755293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 11755294 . T . PASS END=11755295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 11755296 . G . PASS END=11755296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 11755297 . C . PASS END=11755304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 11755305 . T . PASS END=11755305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:29,0 chr2 11755306 . T . PASS END=11755320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 11755321 . T . PASS END=11755322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1070:0,74,255:26,0 chr2 11755323 . C . PASS END=11755324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 11755325 . C . PASS END=11755325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 11755326 . T . PASS END=11755344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1124:0,87,255:31,0 chr2 11755345 . A . PASS END=11755345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 11755346 . C . PASS END=11755390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr2 11755391 . C . PASS END=11755405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,65,255:26,0 chr2 11755406 . G . PASS END=11755416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,69,255:19,0 chr2 11756757 . G . PASS END=11756846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:39:0,84,1385:0,84,255:40,0 chr2 11758414 . G . PASS END=11758417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 11758418 . A . PASS END=11758418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 11758419 . G . PASS END=11758439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr2 11758440 . G . PASS END=11758467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr2 11758468 . A . PASS END=11758468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:20,0 chr2 11758469 . G . PASS END=11758478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 11758479 . T . PASS END=11758481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 11758482 . C . PASS END=11758485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11758486 . A . PASS END=11758488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,814:0,53,255:19,0 chr2 11758489 . C . PASS END=11758492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 11758493 . T . PASS END=11758494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 11758495 . G . PASS END=11758498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 11758499 . C . PASS END=11758527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,623:0,44,255:19,0 chr2 11758528 . A . PASS END=11758528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 11758529 . A . PASS END=11758557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr2 11758558 . C . PASS END=11758558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 11758559 . C . PASS END=11758570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 11758571 . C . PASS END=11758571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 11758572 . A . PASS END=11758575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 11758576 . A . PASS END=11758576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 11758577 . C . PASS END=11758602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,560:0,48,255:18,0 chr2 11758603 . A . PASS END=11758604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 11758605 . T . PASS END=11758617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 11758618 . C . PASS END=11758646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:23,0 chr2 11758647 . A . PASS END=11758649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,658:0,43,255:19,0 chr2 11758650 . T . PASS END=11758659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 11758660 . C . PASS END=11758660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 11758661 . C . PASS END=11758661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11758662 . C . PASS END=11758662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr2 11758663 . A . PASS END=11758663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11758664 . G . PASS END=11758665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,729:0,49,255:19,0 chr2 11758666 . T . PASS END=11758670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 11758671 . T . PASS END=11758675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr2 11758676 . C . PASS END=11758676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:17,0 chr2 11758677 . T . PASS END=11758702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr2 11758703 . G A, 46.81 PASS DP=19;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=-0.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:7,1,0:5,6,0:46:82,0,50,221,429,651:192,0,255:12,0:4.6807e+01,1.1235e-04,5.3000e+01,2.2148e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,3,4:5,7,3,4 chr2 11758704 . C . PASS END=11758714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,705:0,57,255:19,0 chr2 11758715 . C . PASS END=11758723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 11758724 . C . PASS END=11758724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 11758725 . C . PASS END=11758726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11758727 . G . PASS END=11758740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 11758741 . G . PASS END=11758756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 11758757 . C . PASS END=11758757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:15,0 chr2 11758758 . T . PASS END=11758758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 11758759 . G . PASS END=11758760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 11758761 . C . PASS END=11758761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 11758762 . G . PASS END=11758762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 11758763 . C . PASS END=11758769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 11758770 . C . LowGQ END=11758770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,518:4,0,255:13,0 chr2 11758771 . C . PASS END=11758773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,512:0,31,255:13,0 chr2 11758774 . T . PASS END=11758777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 11758778 . C . PASS END=11758778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr2 11758779 . T . PASS END=11758779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 11758780 . T . PASS END=11758781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,466:0,26,255:13,0 chr2 11758782 . T . PASS END=11758797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 11758798 . A . PASS END=11758799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 11758800 . G . PASS END=11758818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 11758819 . A . PASS END=11758851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:34:13:0,34,474:0,34,255:13,0 chr2 11758852 . T . PASS END=11758852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 11758853 . G . PASS END=11758855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 11758856 . C . PASS END=11758870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr2 11758871 . G . PASS END=11758871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 11758872 . T . PASS END=11758872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 11758873 . G . PASS END=11758873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 11758874 . G . PASS END=11758878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 11758879 . G . PASS END=11758879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 11758880 . C . PASS END=11758883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:11,0 chr2 11758884 . T . PASS END=11758884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 11758885 . T . PASS END=11758908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:12,0 chr2 11758909 . T . PASS END=11758909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 11758910 . G . PASS END=11758928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 11758929 . C . PASS END=11758935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 11758936 . A . PASS END=11758936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 11758937 . C . PASS END=11758956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr2 11758957 . G . PASS END=11758967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 11758968 . A . PASS END=11758991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 11758992 . G . PASS END=11758997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 11758998 . G . PASS END=11758998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 11758999 . T . PASS END=11759004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 11759005 . G . PASS END=11759031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 11759032 . G . LowGQ END=11759032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:9,0 chr2 11759033 . C . PASS END=11759038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 11759039 . C . PASS END=11759039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11759040 . C . PASS END=11759042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 11759043 . C . PASS END=11759045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 11761031 . A . PASS END=11761041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr2 11761042 . A . PASS END=11761042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr2 11761043 . G . PASS END=11761043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 11761044 . G . PASS END=11761057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:30,0 chr2 11761058 . T . PASS END=11761058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:29,0 chr2 11761059 . T . PASS END=11761113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1131:0,90,255:36,0 chr2 11761114 . C . PASS END=11761114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr2 11761115 . G . PASS END=11761123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:33,0 chr2 11761124 . A . PASS END=11761133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:28:0,66,990:0,68,255:25,0 chr2 11765280 . A . PASS END=11765418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1119:0,83,255:39,0 chr2 11765419 . T . PASS END=11765438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:61:26:0,61,947:0,61,255:28,0 chr2 11767088 . A . PASS END=11767105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr2 11767106 . A . PASS END=11767179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1027:0,84,255:36,0 chr2 11767180 . C . PASS END=11767180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr2 11767181 . A . PASS END=11767185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr2 11767186 . T . PASS END=11767187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:30,0 chr2 11767188 . T . PASS END=11767189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 11767190 . A . PASS END=11767191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:30,0 chr2 11767192 . C . PASS END=11767194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 11767195 . T . PASS END=11767195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1008:0,38,255:26,0 chr2 11767196 . G . PASS END=11767196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr2 11767197 . C . PASS END=11767197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1069:0,38,255:25,0 chr2 11767198 . C . PASS END=11767200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:26,0 chr2 11767201 . C . PASS END=11767222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,892:0,62,255:24,0 chr2 11767223 . G . PASS END=11767223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr2 11767224 . C . PASS END=11767230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 11770074 . C . PASS END=11770077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr2 11770078 . A . PASS END=11770078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,782:0,30,255:21,0 chr2 11770079 . T . PASS END=11770080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 11770081 . A . PASS END=11770235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:30:0,86,1251:0,86,255:40,1 chr2 11772035 . A . PASS END=11772062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,708:0,63,255:22,0 chr2 11772063 . T . PASS END=11772063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr2 11772064 . C . PASS END=11772065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11772066 . C . PASS END=11772066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 11772067 . T . PASS END=11772098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,783:0,66,255:25,0 chr2 11772099 . T . PASS END=11772100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 11772101 . A . PASS END=11772108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,67,255:26,0 chr2 11772109 . C . PASS END=11772109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 11772110 . C . PASS END=11772112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 11772113 . G . PASS END=11772115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11772116 . A . PASS END=11772117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11772118 . G . PASS END=11772119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 11772120 . A . PASS END=11772152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 11772153 . A . PASS END=11772153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 11772154 . G . PASS END=11772176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,894:0,64,255:25,0 chr2 11772177 . A . PASS END=11772177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 11772178 . G . PASS END=11772182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:26,0 chr2 11772183 . A . PASS END=11772183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,811:0,39,255:25,0 chr2 11772184 . T . PASS END=11772205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr2 11772206 . G . PASS END=11772206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:24,0 chr2 11772207 . T . PASS END=11772219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,61,255:25,0 chr2 11772220 . C . PASS END=11772230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:21:0,42,630:0,63,255:19,0 chr2 11772231 . C . PASS END=11772236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,43,255:13,0 chr2 11772237 . T . PASS END=11772237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,429:0,6,255:13,0 chr2 11772238 . T . PASS END=11772239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 11773015 . G . PASS END=11773028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:30,0 chr2 11773029 . C . PASS END=11773029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 11773030 . T . PASS END=11773158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1111:0,82,255:40,0 chr2 11773159 . T . PASS END=11773159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 11773160 . G . PASS END=11773160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 11773161 . G . PASS END=11773167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 11773168 . A . PASS END=11773169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 11773170 . T . PASS END=11773170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 11773171 . C . PASS END=11773174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11773175 . T . PASS END=11773186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,71,255:26,0 chr2 11773187 . C . PASS END=11773189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 11774257 . G . PASS END=11774274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr2 11774275 . A . PASS END=11774275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 11774276 . A . PASS END=11774281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:18,0 chr2 11774282 . G . PASS END=11774282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 11774283 . T . PASS END=11774286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 11774287 . T . PASS END=11774299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,657:0,41,255:19,0 chr2 11774300 . A . PASS END=11774313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 11774314 . G . PASS END=11774323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,751:0,47,255:19,0 chr2 11774324 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=0.232;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:2,6,0:9,7,0:48:85,0,50,465,365,829:255,0,255:9,0:5.0000e+01,6.7563e-05,5.2562e+01,4.5000e+02,3.9931e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,8,5:5,6,7,6 chr2 11774325 . A . PASS END=11774328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,56,255:19,0 chr2 11774329 . C . PASS END=11774331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11774332 . G . PASS END=11774334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 11774335 . C . PASS END=11774337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 11774338 . C . PASS END=11774350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr2 11774351 . C . PASS END=11774361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:23,0 chr2 11774362 . G . PASS END=11774382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:23,0 chr2 11774383 . C . PASS END=11774386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 11774387 . G . PASS END=11774394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 11774395 . G . PASS END=11774395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 11774396 . C . PASS END=11774432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,726:0,60,255:22,0 chr2 11774433 . T . PASS END=11774467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,675:0,44,255:19,0 chr2 11774468 . C . PASS END=11774475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 11775396 . G . PASS END=11775398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,987:0,87,255:29,0 chr2 11775399 . C . PASS END=11775399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:27,0 chr2 11775400 . C . PASS END=11775400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 11775401 . T . PASS END=11775401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr2 11775402 . G . PASS END=11775408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,983:0,90,255:30,0 chr2 11775409 . G . PASS END=11775410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1066:0,66,255:31,0 chr2 11775411 . T . PASS END=11775413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:95:32:0,95,970:0,95,255:32,0 chr2 11775414 . A . PASS END=11775414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:31,0 chr2 11775415 . G . PASS END=11775416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1083:0,96,255:32,0 chr2 11775417 . C . PASS END=11775417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr2 11775418 . T . PASS END=11775418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,978:0,24,255:28,0 chr2 11775419 . T . PASS END=11775424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr2 11775425 . T . PASS END=11775425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 11775426 . G . PASS END=11775432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1126:0,85,255:35,0 chr2 11775433 . C . PASS END=11775433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:33,0 chr2 11775434 . A . PASS END=11775436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1189:0,88,255:34,0 chr2 11775437 . G . PASS END=11775437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1219:0,56,255:34,0 chr2 11775438 . C . PASS END=11775445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1238:0,80,255:35,0 chr2 11775446 . T . PASS END=11775446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1133:0,47,255:32,0 chr2 11775447 . C . PASS END=11775453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1183:0,91,255:35,0 chr2 11775454 . T . PASS END=11775454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:31,0 chr2 11775455 . G . PASS END=11775477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1105:0,82,255:33,0 chr2 11775478 . A . PASS END=11775478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 11775479 . T . PASS END=11775481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 11775482 . A . PASS END=11775482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 11775483 . G . PASS END=11775486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 11775487 . C . PASS END=11775487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 11775488 . A . PASS END=11775488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 11775489 . G . PASS END=11775489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 11775490 . A . PASS END=11775495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 11775496 . G . PASS END=11775518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr2 11775519 . C . PASS END=11775519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 11775520 . A . PASS END=11775528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 11775529 . A . PASS END=11775531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 11777842 . G . PASS END=11777852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,746:0,63,255:26,0 chr2 11777853 . C . PASS END=11777855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 11777856 . T . PASS END=11777856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 11777857 . G . PASS END=11778006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1025:0,81,255:40,0 chr2 11778007 . C . PASS END=11778015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr2 11778016 . G . PASS END=11778036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 11778037 . T . PASS END=11778037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr2 11778038 . C . PASS END=11778042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 11778797 . A . PASS END=11778803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 11778804 . T . PASS END=11778807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1069:0,71,255:27,0 chr2 11778808 . C . PASS END=11778921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:30:0,87,1288:0,90,255:40,0 chr2 11778922 . T . PASS END=11778922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1210:0,61,255:32,0 chr2 11778923 . C . PASS END=11778935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:35,0 chr2 11780417 . G . PASS END=11780422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 11780423 . C . PASS END=11780429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 11780430 . T . PASS END=11780430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 11780431 . G . PASS END=11780438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:23,0 chr2 11780439 . T . PASS END=11780439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 11780440 . C . PASS END=11780482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,861:0,61,255:26,0 chr2 11780483 . T . PASS END=11780489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 11780490 . C . PASS END=11780490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 11780491 . G . PASS END=11780493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 11780494 . T . PASS END=11780512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 11780513 . A . PASS END=11780513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:21,0 chr2 11780514 . T . PASS END=11780543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:25,0 chr2 11780544 . C . PASS END=11780544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 11780545 . C . PASS END=11780551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 11780552 . T . PASS END=11780552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 11780553 . C . PASS END=11780559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 11780560 . C . LowGQ END=11780560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,457:17,0,255:16,0 chr2 11780561 . T . PASS END=11780561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,614:0,46,255:18,0 chr2 11780562 . G . PASS END=11780562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,584:0,15,255:16,0 chr2 11780563 . A . PASS END=11780563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,590:0,30,255:17,0 chr2 11780564 . C . PASS END=11780574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,581:0,46,255:19,0 chr2 11780575 . A . LowGQ END=11780576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:20:0,0,480:0,0,255:15,0 chr2 11780577 . C . PASS END=11780577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,545:0,27,255:14,0 chr2 11780578 . T . PASS END=11780580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:16,0 chr2 11798605 . T . PASS END=11798615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 11798616 . T . LowGQ END=11798616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:11,0 chr2 11798617 . T . PASS END=11798640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr2 11798641 . A . PASS END=11798641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 11798642 . G . PASS END=11798644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 11798645 . G . PASS END=11798654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:19,0 chr2 11798655 . G . PASS END=11798659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 11798660 . G . PASS END=11798660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 11798661 . G . PASS END=11798692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:26,0 chr2 11798693 . G . PASS END=11798724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1089:0,87,255:35,0 chr2 11798725 . T . PASS END=11798725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:34,0 chr2 11798726 . T . PASS END=11798845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:30:0,81,1215:0,89,255:40,0 chr2 11798846 . G . PASS END=11798846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:25,0 chr2 11798847 . G . PASS END=11798848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 11800169 . T . PASS END=11800259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:41:0,88,1535:0,88,255:40,0 chr2 11802093 . T . PASS END=11802103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:13,0 chr2 11802104 . A . PASS END=11802108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 11802109 . G . PASS END=11802115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 11802116 . A . PASS END=11802116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 11802117 . G . PASS END=11802124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 11802125 . A . PASS END=11802125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr2 11802126 . T . PASS END=11802145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,878:0,64,255:26,0 chr2 11802146 . C . PASS END=11802165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:29,0 chr2 11802166 . T . PASS END=11802166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 11802167 . C . PASS END=11802168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11802169 . C . PASS END=11802170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11802171 . G . PASS END=11802186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 11802187 . C . PASS END=11802188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 11802189 . A . PASS END=11802194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11802195 . T . PASS END=11802198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,970:0,67,255:26,0 chr2 11802199 . G . PASS END=11802207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr2 11802208 . A . PASS END=11802209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr2 11802210 . C . PASS END=11802213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 11802214 . C . PASS END=11802247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 11802248 . C . PASS END=11802259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,792:0,53,255:20,0 chr2 11802260 . G . PASS END=11802260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 11802261 . A . PASS END=11802262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 11802263 . G . PASS END=11802268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 11802269 . G . PASS END=11802299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr2 11802300 . T . PASS END=11802302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 11802303 . C . PASS END=11802310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 11802311 . C . PASS END=11802311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr2 11802312 . C . PASS END=11802316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 11802317 . A . PASS END=11802317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 11802318 . G . PASS END=11802320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr2 11802321 . A . PASS END=11802321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr2 11802322 . A . PASS END=11802327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr2 11802328 . T . PASS END=11802366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr2 11809632 . C . LowGQ END=11809635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:6:0,0,169:0,0,169:6,0 chr2 11809636 . A . PASS END=11809638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 11809639 . A . LowGQ END=11809639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr2 11809640 . A . PASS END=11809640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 11809641 . G . PASS END=11809641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 11809642 . A . PASS END=11809642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 11809643 . C . LowGQ END=11809644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,194:4,0,214:8,0 chr2 11809645 . T . PASS END=11809645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 11809646 . G . LowGQ END=11809646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr2 11809647 . G . PASS END=11809649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr2 11809650 . C . PASS END=11809652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 11809653 . G . PASS END=11809653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr2 11809654 . G . LowGQ END=11809655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:1,0,255:9,0 chr2 11809656 . G . PASS END=11809656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 11809657 . C . LowGQ END=11809657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr2 11809658 . G . PASS END=11809658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 11809659 . G . PASS END=11809659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr2 11809660 . C . LowGQ END=11809661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr2 11809662 . C . PASS END=11809662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr2 11809663 . A . PASS END=11809664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 11809665 . C . PASS END=11809665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 11809666 . A . PASS END=11809666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 11809667 . G . PASS END=11809667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr2 11809668 . C . PASS END=11809668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 11809669 . A . PASS END=11809670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 11809671 . C . PASS END=11809671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 11809672 . G . PASS END=11809673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,545:0,15,255:17,0 chr2 11809674 . G . PASS END=11809674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 11809675 . C . PASS END=11809675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 11809676 . A . PASS END=11809677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 11809678 . A . PASS END=11809678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 11809679 . C . PASS END=11809679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 11809680 . T . PASS END=11809680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr2 11809681 . C . PASS END=11809683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 11809684 . G . PASS END=11809685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,0 chr2 11809686 . G . PASS END=11809687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 11809688 . C . LowGQ END=11809688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,543:23,0,255:16,0 chr2 11809689 . G . PASS END=11809696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:18,0 chr2 11809697 . G . PASS END=11809697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr2 11809698 . C . PASS END=11809699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:18,0 chr2 11809700 . C . PASS END=11809700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr2 11809701 . C . PASS END=11809710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,637:0,40,255:19,0 chr2 11809711 . G . PASS END=11809711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 11809712 . T . PASS END=11809773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 11809774 . G . PASS END=11809774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 11809775 . C . PASS END=11809794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,560:0,41,255:16,0 chr2 11809795 . C . PASS END=11809795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 11809796 . A . PASS END=11809808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 11809809 . T . PASS END=11809821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,540:0,32,255:13,0 chr2 11809822 . C . PASS END=11809824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 11809825 . C . PASS END=11809838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,495:0,31,255:13,0 chr2 11809839 . C . PASS END=11809843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 11809844 . A . PASS END=11809853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr2 11809854 . G . PASS END=11809854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr2 11809855 . C . PASS END=11809856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,426:0,33,255:11,0 chr2 11809857 . G . PASS END=11809857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 11809858 . C . PASS END=11809861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 11809862 . C . PASS END=11809862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 11809863 . G . PASS END=11809908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr2 11809909 . T . PASS END=11809909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr2 11809910 . C . PASS END=11809916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 11809917 . G . PASS END=11809917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 11809918 . A . PASS END=11809928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:12,0 chr2 11809929 . G . PASS END=11809929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 11809930 . C . PASS END=11809931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 11809932 . G . LowGQ END=11809932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr2 11809933 . C . PASS END=11809934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 11809935 . G . PASS END=11809947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 11809948 . A . PASS END=11809954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 11809955 . A . PASS END=11809955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr2 11809956 . G . PASS END=11809957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 11809958 . G . PASS END=11809958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 11809959 . G . PASS END=11809966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 11809967 . A . LowGQ END=11809967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:11,0 chr2 11809968 . C . PASS END=11809974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 11809975 . A . PASS END=11809975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 11809976 . A . PASS END=11809980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 11809981 . T . PASS END=11809981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr2 11809982 . A . PASS END=11809991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr2 11809992 . C . PASS END=11809992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 11809993 . G . PASS END=11809993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 11809994 . G . PASS END=11809999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 11810000 . C . PASS END=11810000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr2 11810001 . G . PASS END=11810010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 11810011 . A . PASS END=11810012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11810013 . C . PASS END=11810013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 11810014 . A . PASS END=11810014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11810015 . G . PASS END=11810015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 11810016 . C . PASS END=11810017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 11810018 . G . PASS END=11810024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr2 11810025 . G . PASS END=11810033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:11:0,20,360:0,20,255:9,0 chr2 11810034 . G . PASS END=11810046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr2 11810047 . T . LowGQ END=11810047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr2 11810048 . G . PASS END=11810050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 11810051 . G . PASS END=11810051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 11810052 . C . PASS END=11810056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 11810057 . G . LowGQ END=11810057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr2 11810058 . C . PASS END=11810070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 11810071 . G . PASS END=11810071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:11,0 chr2 11810072 . C . PASS END=11810074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 11810075 . G . PASS END=11810075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr2 11810076 . C . PASS END=11810080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:12,0 chr2 11810081 . T . PASS END=11810081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 11810082 . C . PASS END=11810090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:12,0 chr2 11810091 . G . PASS END=11810094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:16,0 chr2 11810095 . G A, 95.16 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,11,0:0,5,0:45:133,48,0,620,48,620:255,51,0:0,0:9.5156e+01,4.5156e+01,1.3254e-04,4.5000e+02,7.9926e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,8:0,0,9,7 chr2 11810096 . C . PASS END=11810096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 11810097 . G . PASS END=11810097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr2 11810098 . G . PASS END=11810098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 11810099 . A . PASS END=11810108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,668:0,43,255:18,0 chr2 11810109 . G . PASS END=11810109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:18,0 chr2 11810110 . C . PASS END=11810115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,627:0,40,255:18,0 chr2 11810116 . G . PASS END=11810116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:18,0 chr2 11810117 . C . PASS END=11810122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr2 11810123 . G . PASS END=11810123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:18,0 chr2 11810124 . C . PASS END=11810124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 11810125 . G . PASS END=11810125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:18,0 chr2 11810126 . C . PASS END=11810132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,782:0,50,255:20,0 chr2 11810133 . G . PASS END=11810133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 11810134 . A . PASS END=11810134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 11810135 . G . PASS END=11810135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr2 11810136 . T . PASS END=11810136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 11810137 . G . PASS END=11810137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr2 11810138 . C . PASS END=11810138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 11810139 . G . PASS END=11810139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr2 11810140 . T . PASS END=11810143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr2 11810144 . G . PASS END=11810168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr2 11810169 . G . PASS END=11810218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr2 11810219 . A . PASS END=11810219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:20,0 chr2 11810220 . G . PASS END=11810221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 11810222 . T . PASS END=11810251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:18,0 chr2 11810252 . C . PASS END=11810252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 11810253 . C . PASS END=11810255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr2 11817774 . A . PASS END=11817774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1319:0,105,255:35,0 chr2 11817775 . T . PASS END=11817811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,101,1311:0,101,255:40,0 chr2 11817812 . G C, 49.54 PASS DP=41;MQ=249.16;MQRankSum=4.876;ReadPosRankSum=4.405;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,19,0:0.463,0.000:41:11,12,0:11,7,0:48:84,0,50,680,767,1447:255,0,255:19,0:4.9539e+01,7.0152e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,11,8:13,9,12,7 chr2 11817813 . A . PASS END=11817849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:34:0,96,1421:0,102,255:40,0 chr2 11817850 . C . PASS END=11817854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:31,0 chr2 11850721 . A . PASS END=11850723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:80:0,120,1800:0,230,255:40,0 chr2 11853882 . A . PASS END=11853912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,129,255:40,0 chr2 11853913 . G A, 41.22 PASS DP=76;MQ=250.00;MQRankSum=7.111;ReadPosRankSum=2.360;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,26,0:0.342,0.000:76:22,13,0:28,13,0:41:76,0,50,893,1764,2656:255,0,255:40,0:4.1219e+01,3.4973e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,31,13,13:23,27,14,12 chr2 11853914 . A . PASS END=11853938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:75:0,120,1800:0,192,255:40,0 chr2 11881546 . A . PASS END=11881554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,151,255:40,0 chr2 11886732 . T . LowGQ END=11886732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr2 11886738 . G . PASS END=11886738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr2 11886772 . A . PASS END=11886772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 11886781 . A . PASS END=11886781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,197:6,0 chr2 11886792 . C . PASS END=11886792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 11886796 . C . PASS END=11886796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr2 11886801 . A . PASS END=11886801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr2 11890428 . C G, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=3.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,12,0:0.571,0.000:21:4,7,0:5,5,0:48:85,0,49,429,293,722:255,0,255:8,0:5.0000e+01,7.1446e-05,5.1921e+01,4.2919e+02,3.2789e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,8,4:3,6,5,7 chr2 11905659 . G . PASS END=11905679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:38:0,98,1388:0,98,255:40,0 chr2 11905680 . G . PASS END=11905851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:35:0,92,1324:0,92,255:40,0 chr2 11905852 . A . PASS END=11905852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:32,0 chr2 11905853 . G . PASS END=11905859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:34:0,91,1213:0,91,255:34,0 chr2 11907889 . G . PASS END=11907984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,168,255:40,0 chr2 11911498 . G . PASS END=11911499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:30,0 chr2 11911500 . A . PASS END=11911501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 11911502 . T . PASS END=11911502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr2 11911503 . T . PASS END=11911503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr2 11911504 . A . PASS END=11911506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1048:0,90,255:30,0 chr2 11911507 . C . PASS END=11911507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 11911508 . C . PASS END=11911616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1164:0,81,255:39,0 chr2 11911617 . A . PASS END=11911617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:33,0 chr2 11911618 . G . PASS END=11911781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:33:0,81,1215:0,95,255:40,0 chr2 11911782 . C . PASS END=11911785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1080:0,60,255:26,0 chr2 11911786 . G . PASS END=11911786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:25,0 chr2 11911787 . A . PASS END=11911804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr2 11911805 . G . PASS END=11911805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr2 11913742 . C . PASS END=11913742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 11913746 . A . PASS END=11913770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,104,1385:0,104,255:40,0 chr2 11913771 . T . PASS END=11913871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:42:0,87,1438:0,87,255:40,0 chr2 11913875 . A . PASS END=11913875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,102,1530:0,107,255:33,0 chr2 11916210 . A . PASS END=11916210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:33,0 chr2 11916212 . T . PASS END=11916217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:35,0 chr2 11916218 . G . PASS END=11916218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:34,0 chr2 11916219 . G . PASS END=11916316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:32:0,87,1186:0,96,255:40,0 chr2 11916317 . A . PASS END=11916317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr2 11916318 . A . PASS END=11916319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 11919645 . T . PASS END=11919652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11919653 . G . PASS END=11919653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 11919654 . T . PASS END=11919675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1039:0,84,255:31,0 chr2 11919676 . A . PASS END=11919676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr2 11919677 . G . PASS END=11919741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1172:0,85,255:35,0 chr2 11919742 . C . PASS END=11919764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr2 11919765 . T . PASS END=11919765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:19,0 chr2 11919766 . G . PASS END=11919766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 11919767 . C . PASS END=11919769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 11919770 . A . PASS END=11919770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr2 11919771 . G . PASS END=11919771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11922327 . T . PASS END=11922330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 11922331 . C . PASS END=11922332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 11922333 . T . PASS END=11922333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:26,0 chr2 11922334 . C . PASS END=11922336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 11922337 . C . PASS END=11922337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 11922338 . A . PASS END=11922338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:25,0 chr2 11922339 . C . PASS END=11922340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 11922341 . C . PASS END=11922356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1219:0,87,255:34,0 chr2 11922357 . A . PASS END=11922357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:32,0 chr2 11922358 . G . PASS END=11922362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:36,0 chr2 11922363 . T . PASS END=11922363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:35,0 chr2 11922364 . T . PASS END=11922393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1386:0,87,255:40,0 chr2 11922394 . A . PASS END=11922394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:33,0 chr2 11922395 . C . PASS END=11922416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,102,1530:0,114,255:38,0 chr2 11922417 . T . PASS END=11922417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:35,0 chr2 11922418 . C . PASS END=11922475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:39:0,87,1313:0,87,255:40,2 chr2 11922476 . G . PASS END=11922476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:70:52:0,70,1814:0,70,255:40,2 chr2 11922477 . A . PASS END=11922581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1485:0,91,255:40,0 chr2 11922582 . G . PASS END=11922610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,69,255:26,0 chr2 11922611 . G . PASS END=11922611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 11922612 . G . PASS END=11922616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,847:0,69,255:23,0 chr2 11922617 . T . PASS END=11922618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr2 11922619 . C . PASS END=11922620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 11922621 . T . PASS END=11922625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 11922626 . G . PASS END=11922631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 11922632 . A . PASS END=11922632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:21,0 chr2 11922633 . G . PASS END=11922633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11923948 . G . PASS END=11923948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 11923955 . A . PASS END=11924052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:34:0,85,1325:0,85,255:40,0 chr2 11924838 . C . PASS END=11924841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:30,0 chr2 11924889 . T . PASS END=11924912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 11924913 . T . PASS END=11924913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11924914 . C . PASS END=11924915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 11924916 . G . PASS END=11924918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 11924919 . G . PASS END=11924949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,49,255:19,0 chr2 11924950 . T C, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=2.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,11,0:0.611,0.000:18:4,7,0:3,4,0:47:85,0,48,385,250,636:255,0,217:6,0:5.0000e+01,7.7400e-05,5.1055e+01,3.8543e+02,2.8519e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,2,9:4,3,4,7 chr2 11924951 . G . PASS END=11924952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:19,0 chr2 11925012 . C . PASS END=11925017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:23,0 chr2 11925018 . T . PASS END=11925018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr2 11925019 . C . PASS END=11925026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 11925027 . A . PASS END=11925027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 11925028 . C . PASS END=11925054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,858:0,72,255:26,0 chr2 11925055 . G . PASS END=11925055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 11925056 . C . PASS END=11925078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 11925079 . C . PASS END=11925125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,612:0,48,255:19,0 chr2 11925126 . G . PASS END=11925126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 11925127 . G . PASS END=11925131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr2 11925132 . G . PASS END=11925137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 11925138 . G . PASS END=11925138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 11925139 . G . PASS END=11925151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 11925152 . T . PASS END=11925171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr2 11925172 . G . PASS END=11925202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 11925204 . T . PASS END=11925204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 11927200 . A . PASS END=11927293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,117,1677:0,117,255:40,0 chr2 11928513 . A . PASS END=11928582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,101,1448:0,101,255:40,0 chr2 11931834 . T . PASS END=11931911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:72:0,120,1800:0,175,255:40,1 chr2 11932040 . G . PASS END=11932132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,147,255:40,0 chr2 11935534 . G . PASS END=11935587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1088:0,83,255:33,0 chr2 11935588 . C . PASS END=11935590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 11935591 . C . PASS END=11935603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1019:0,84,255:28,0 chr2 11935604 . T . PASS END=11935604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 11935605 . G . PASS END=11935610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11935611 . C . PASS END=11935613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 11935618 . G . PASS END=11935618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 11935620 . T . PASS END=11935620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 11943033 . G . PASS END=11943038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,631:0,57,255:19,0 chr2 11943039 . G . PASS END=11943039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 11943040 . C . PASS END=11943040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr2 11943041 . A . PASS END=11943061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr2 11943062 . A . PASS END=11943062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 11943063 . G . PASS END=11943089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr2 11943090 . C . PASS END=11943097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr2 11943098 . A . PASS END=11943153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,810:0,61,255:26,0 chr2 11943154 . C . PASS END=11943159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 11944549 . A . PASS END=11944551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 11944552 . A . PASS END=11944552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 11944553 . G . PASS END=11944561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:24,0 chr2 11944562 . T . PASS END=11944562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 11944563 . G . PASS END=11944567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,865:0,72,255:26,0 chr2 11944568 . A . PASS END=11944568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 11944569 . T . PASS END=11944580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,929:0,65,255:25,0 chr2 11944581 . C . PASS END=11944581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 11944582 . G . PASS END=11944583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 11944584 . G . PASS END=11944594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:28,0 chr2 11944595 . T . PASS END=11944599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr2 11944600 . A . PASS END=11944602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 11944603 . C . PASS END=11944603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:29,0 chr2 11944604 . A . PASS END=11944669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1107:0,83,255:37,0 chr2 11944670 . T . PASS END=11944670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr2 11944671 . T . PASS END=11944673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 11944674 . T . PASS END=11944675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 11944676 . A . PASS END=11944678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 11944679 . T . PASS END=11944679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 11944680 . T . PASS END=11944681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 11944682 . A . PASS END=11944682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 11944683 . T . PASS END=11944688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 11944689 . A . PASS END=11944689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:27,0 chr2 11944690 . A . PASS END=11944690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 11944691 . T . PASS END=11944697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,74,255:25,0 chr2 11944702 . G . PASS END=11944702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 11945195 . G . PASS END=11945282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:86:34:0,86,1217:0,86,255:40,0 chr2 11955214 . G . PASS END=11955226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,629:0,54,255:18,0 chr2 11955227 . T . PASS END=11955227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 11955228 . T . PASS END=11955228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 11955229 . T . PASS END=11955236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:21,0 chr2 11955237 . G . PASS END=11955241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr2 11955242 . G . PASS END=11955242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 11955243 . C . PASS END=11955244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 11955245 . C . PASS END=11955252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 11955253 . C . PASS END=11955253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr2 11955254 . G . PASS END=11955256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 11955257 . A . PASS END=11955261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 11955262 . G . PASS END=11955264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 11955265 . C . PASS END=11955265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:24,0 chr2 11955266 . A . PASS END=11955298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,848:0,61,255:26,0 chr2 11955299 . A . PASS END=11955299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:22,0 chr2 11955300 . G . PASS END=11955303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 11955304 . C . PASS END=11955304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 11955305 . A . PASS END=11955313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 11955314 . C . PASS END=11955315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:19,0 chr2 11955316 . C . PASS END=11955320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11955321 . G . PASS END=11955321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr2 11955322 . G . PASS END=11955323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11955324 . C . PASS END=11955350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,584:0,51,255:18,0 chr2 11955351 . T . PASS END=11955351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 11955352 . C . PASS END=11955362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 11955363 . A . PASS END=11955366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 11959602 . T . PASS END=11959602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 11959610 . A . PASS END=11959724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,179,255:40,0 chr2 11960537 . G . PASS END=11960640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:62:0,120,1800:0,162,255:40,0 chr2 11964758 . G . PASS END=11964917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:30:0,87,1173:0,90,255:40,0 chr2 11965016 . C . PASS END=11965016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11965188 . G . PASS END=11965188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 11965321 . G . PASS END=11965321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 11965455 . C . PASS END=11965455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 11965458 . C . PASS END=11965458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 11965593 . C . PASS END=11965593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 11965621 . A . PASS END=11965621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 11965694 . G . PASS END=11965694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 11965733 . A . PASS END=11965733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 11965844 . A . PASS END=11965844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 11965983 . A . PASS END=11965983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 11966017 . T . PASS END=11966018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 11966180 . C . PASS END=11966180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 11966255 . C . PASS END=11966255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 11966260 . T . PASS END=11966260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 11966274 . G . PASS END=11966274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11966291 . G . PASS END=11966291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 11966347 . C . PASS END=11966347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11966404 . G . PASS END=11966404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 11966499 . T . PASS END=11966499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 11966625 . G . PASS END=11966625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:36:35:0,36,540:0,88,255:11,0 chr2 11966631 . C . PASS END=11966631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:36:37:0,36,540:0,77,255:10,0 chr2 11966638 . T . PASS END=11966638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:11:35:0,11,981:0,11,255:6,2 chr2 11966639 . CAAAAA CAAAA,CAAA,CAA,C, 51.65 PASS DP=32;MQ=240.63;MQRankSum=2.138;ReadPosRankSum=-0.251;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:9,8,7,5,3,0:0.250,0.219,0.156,0.094,0.000:32:3,5,4,3,2,0:6,3,3,2,1,0:5:53,33,26,0,3,28,11,7,40,57,81,51,71,152,101,252,252,252,252,252,252:255,0,255:5,37:5.1649e+01,3.4804e+01,3.0319e+01,1.6487e+00,7.2622e+00,3.2656e+01,1.2183e+01,1.1824e+01,4.4664e+01,6.1824e+01,8.2858e+01,5.5381e+01,7.6142e+01,1.5679e+02,1.0538e+02,2.8556e+02,2.8856e+02,2.8856e+02,2.8856e+02,2.8856e+02,2.8858e+02:0.00,3.00,6.01,3.00,6.00,6.01,3.00,6.00,6.00,6.01,3.00,6.00,6.00,6.00,6.01,34.77,37.77,37.77,37.77,37.77,37.78:6,3,13,10:4,5,10,13 chr2 11966640 . A . LowGQ END=11966640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:13,38:51:0:51:0,0,0:255,0,255:10,35 chr2 11966661 . A . PASS END=11966661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1324:0,92,255:32,0 chr2 11966663 . A . PASS END=11966663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:22:36:0,22,1163:0,22,255:32,0 chr2 11966689 . G . PASS END=11966689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1264:0,92,255:35,0 chr2 11966697 . A . PASS END=11966697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:36:0,90,1350:0,91,255:30,0 chr2 11966914 . C . PASS END=11966914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 11966918 . G . PASS END=11966918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 11966946 . G . PASS END=11966946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 11966969 . C . PASS END=11966969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 11967062 . A . PASS END=11967062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 11967130 . G . PASS END=11967130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 11967201 . A . PASS END=11967201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 11967514 . C . PASS END=11967514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,255,255:40,0 chr2 12858434 . A . PASS END=12858434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 12858435 . T . PASS END=12858442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,43,255:19,0 chr2 12858443 . C . PASS END=12858443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 12858444 . A . PASS END=12858444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 12858445 . C . PASS END=12858452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,723:0,60,255:25,0 chr2 12858453 . C . PASS END=12858453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 12858454 . C . PASS END=12858455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 12858456 . C . PASS END=12858457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:25:0,42,892:0,42,255:25,0 chr2 12858458 . A . PASS END=12858458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 12858459 . T . PASS END=12858470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:30,0 chr2 12858471 . G . PASS END=12858471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr2 12858472 . A . PASS END=12858501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1073:0,82,255:36,0 chr2 12858502 . T . PASS END=12858502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1288:0,59,255:34,0 chr2 12858503 . T . PASS END=12858544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1266:0,81,255:35,0 chr2 12858545 . A . PASS END=12858545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1069:0,60,255:31,0 chr2 12858546 . G . PASS END=12858554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1249:0,89,255:33,0 chr2 12858555 . C . PASS END=12858555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:29,0 chr2 12858556 . G . PASS END=12858573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1200:0,83,255:31,0 chr2 12858574 . C . PASS END=12858576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 12858577 . G . PASS END=12858577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 12858578 . C . PASS END=12858579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 12858580 . C . PASS END=12858580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 12858581 . G . PASS END=12858584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1020:0,77,255:27,0 chr2 12858585 . C . PASS END=12858590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 12858591 . A . PASS END=12858591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,912:0,76,255:28,0 chr2 12858592 . C . PASS END=12858597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 12858598 . G . PASS END=12858598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 12858599 . C . PASS END=12858601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 12858602 . T . PASS END=12858602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 12858603 . G . PASS END=12858611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 12858612 . G . PASS END=12858619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr2 12858620 . A . PASS END=12858620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1015:0,49,255:24,0 chr2 12858621 . A . PASS END=12858622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 12858623 . T . PASS END=12858623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 12858624 . A . PASS END=12858624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,909:0,40,255:26,0 chr2 12858625 . C . PASS END=12858626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:27,0 chr2 12858627 . T . PASS END=12858650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 12858651 . A . PASS END=12858678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,46,255:19,0 chr2 12858679 . C . PASS END=12858701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 12858702 . A . PASS END=12858703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 12863386 . G . PASS END=12863387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 12863388 . G . PASS END=12863392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 12863393 . A . PASS END=12863393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 12863394 . T . PASS END=12863413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,621:0,48,255:19,0 chr2 12863414 . C . PASS END=12863443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:24,0 chr2 12863444 . A . PASS END=12863445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:25:0,48,898:0,48,255:21,0 chr2 12863446 . A . PASS END=12863470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 12863471 . T . PASS END=12863471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 12863472 . T . PASS END=12863479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 12863480 . G . PASS END=12863480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 12863481 . T . PASS END=12863492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 12863493 . C . PASS END=12863493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 12863494 . T . PASS END=12863494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 12863495 . A . PASS END=12863497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 12863498 . T . PASS END=12863502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 12863503 . T . PASS END=12863504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 12863505 . T . PASS END=12863514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr2 12863515 . T . PASS END=12863515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 12863516 . A . PASS END=12863539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,984:0,65,255:24,0 chr2 12863540 . G . PASS END=12863540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 12863541 . C . PASS END=12863549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 12863550 . G . PASS END=12863550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 12863551 . A . PASS END=12863559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 12863560 . G . PASS END=12863576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr2 12863577 . A . PASS END=12863578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 12863579 . T . PASS END=12863614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,535:0,41,255:19,0 chr2 12863615 . A . PASS END=12863615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,421:0,11,255:13,0 chr2 12863616 . T . PASS END=12863619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 12863620 . G . PASS END=12863620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr2 12863621 . G . PASS END=12863625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 12863626 . C . PASS END=12863626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr2 12863627 . T . PASS END=12863663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,313:0,30,255:11,0 chr2 12863664 . T . PASS END=12863674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 12863675 . A . PASS END=12863678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 12864755 . A . PASS END=12864950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:36:0,90,1319:0,90,255:40,0 chr2 12880452 . G . PASS END=12880465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,908:0,66,255:25,0 chr2 12880466 . T . PASS END=12880466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 12880467 . G . PASS END=12880476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 12880477 . G . PASS END=12880488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,946:0,81,255:31,0 chr2 12880489 . A . PASS END=12880489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 12880490 . T . PASS END=12880591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1124:0,80,255:35,0 chr2 12880592 . C . PASS END=12880592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 12880593 . C . PASS END=12880612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr2 12880613 . T . PASS END=12880616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr2 12880617 . G . PASS END=12880653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr2 12880654 . G . PASS END=12880664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,969:0,65,255:26,0 chr2 12880665 . C . PASS END=12880672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:29,0 chr2 12880673 . T . PASS END=12880673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr2 12880674 . C . PASS END=12880679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 12880680 . C . PASS END=12880680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 12880681 . A . PASS END=12880683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 12880684 . A . PASS END=12880714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,898:0,65,255:26,0 chr2 12880715 . C . PASS END=12880717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 12880718 . T . PASS END=12880718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr2 12880719 . G . PASS END=12880731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr2 12880732 . A . PASS END=12880732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 12880733 . A . PASS END=12880738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 12880739 . T . PASS END=12880739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 12880740 . C . PASS END=12880745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 12880746 . A . PASS END=12880749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1031:0,71,255:26,0 chr2 12880750 . A . PASS END=12880751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 12880752 . T . PASS END=12880752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 12880753 . C . PASS END=12880754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 12880755 . G . PASS END=12880766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:25,0 chr2 12880767 . C . PASS END=12880768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 12880769 . C . PASS END=12880771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:26,0 chr2 12880772 . A . PASS END=12880773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 12880774 . C . PASS END=12880774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 12880775 . G . PASS END=12880901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1155:0,80,255:40,0 chr2 12880902 . G . PASS END=12880902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 12880903 . G . PASS END=12880908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:33,0 chr2 12880909 . T . PASS END=12880920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,990:0,81,255:26,0 chr2 14317807 . T C, 50.00 PASS DP=68;MQ=250.00;MQRankSum=7.080;ReadPosRankSum=4.884;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,35,0:0.515,0.000:68:15,19,0:18,16,0:48:85,0,50,1215,1099,2313:255,0,255:32,0:5.0000e+01,6.5751e-05,5.2914e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,14,19,16:13,20,17,18 chr2 14774104 . A . PASS END=14774114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,894:0,62,255:26,0 chr2 14774115 . A . PASS END=14774116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 14774117 . T . PASS END=14774117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:25,0 chr2 14774118 . G . PASS END=14774120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 14774121 . C . PASS END=14774122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1023:0,71,255:28,0 chr2 14774123 . G . PASS END=14774123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr2 14774124 . C . PASS END=14774124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:29,0 chr2 14774125 . A . PASS END=14774129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 14774130 . C . PASS END=14774130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 14774131 . C . PASS END=14774131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr2 14774132 . A . PASS END=14774134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 14774135 . T . PASS END=14774135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr2 14774136 . C . PASS END=14774136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 14774137 . A . PASS END=14774145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 14774146 . G . PASS END=14774147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1053:0,71,255:27,0 chr2 14774148 . G . PASS END=14774148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 14774149 . T . PASS END=14774150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 14774151 . G . PASS END=14774179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 14774180 . A . PASS END=14774197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,68,255:26,0 chr2 14774198 . G . PASS END=14774198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 14774199 . G . PASS END=14774205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 14774206 . T . PASS END=14774210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 14774211 . C . PASS END=14774213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 14774214 . C . PASS END=14774218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:20:0,44,690:0,44,255:19,0 chr2 14774219 . A . PASS END=14774219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:16,0 chr2 14774220 . T . PASS END=14774228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:17,0 chr2 14774229 . A . PASS END=14774229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 14774230 . G . PASS END=14774250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,653:0,43,255:19,0 chr2 14774251 . C . PASS END=14774251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 14774252 . C . PASS END=14774252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 14774253 . C . PASS END=14774255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 14774256 . C . PASS END=14774257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr2 14774258 . A . PASS END=14774258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:18,0 chr2 14774259 . G . PASS END=14774260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 14774261 . T . PASS END=14774261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:19,0 chr2 14774262 . T . PASS END=14774264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 14774265 . C . PASS END=14774265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 14774266 . G . PASS END=14774272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 14774273 . C . PASS END=14774273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 14774274 . C . PASS END=14774275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 14774276 . C . PASS END=14774282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:19,0 chr2 14774283 . T . PASS END=14774289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 14774290 . C . PASS END=14774290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 14774291 . C . PASS END=14774291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 14774292 . C . PASS END=14774302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,792:0,52,255:19,0 chr2 14774303 . G . PASS END=14774311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 14774312 . G . PASS END=14774312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:19,1 chr2 14774313 . C . PASS END=14774313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:12:21:0,12,677:0,12,255:19,1 chr2 14774314 . C . PASS END=14774316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:21,1 chr2 14774317 . C . PASS END=14774322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr2 14774323 . C . PASS END=14774323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 14774324 . A . PASS END=14774325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr2 14774326 . C . PASS END=14774332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 14774333 . A . PASS END=14774341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1069:0,71,255:26,0 chr2 14774342 . T . PASS END=14774344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 14774345 . T . PASS END=14774345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr2 14774346 . C . PASS END=14774352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr2 14774353 . A . PASS END=14774353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,811:0,40,255:26,0 chr2 14774354 . C . PASS END=14774357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 14774358 . G . PASS END=14774358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 14774359 . T . PASS END=14774359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 14774360 . T . PASS END=14774360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 14774361 . T . PASS END=14774362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 14774363 . C . PASS END=14774363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 14774364 . C . PASS END=14774365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 14774366 . C . PASS END=14774366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 14774367 . C . PASS END=14774377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 14774378 . A . PASS END=14774378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr2 14774379 . G . PASS END=14774380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 14774381 . A . PASS END=14774381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr2 14774382 . A . PASS END=14774398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:30,0 chr2 14774399 . T . PASS END=14774399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 14774400 . G . PASS END=14774433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr2 14774434 . T . PASS END=14774434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:30,0 chr2 14774435 . A . PASS END=14774534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1194:0,86,255:37,0 chr2 14774535 . G . PASS END=14774535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:27,0 chr2 14774536 . G . PASS END=14774537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:29,0 chr2 14774538 . C . PASS END=14774538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 14774539 . G . PASS END=14774552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:28,0 chr2 14774553 . C . PASS END=14774553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 14774554 . G . PASS END=14774554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 14774555 . G . PASS END=14774555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 14774556 . G . PASS END=14774556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 14774557 . C . PASS END=14774557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 14774558 . A . PASS END=14774558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 14774559 . G . PASS END=14774559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 14774560 . A . PASS END=14774561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 14774562 . C . PASS END=14774564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 14774565 . C . PASS END=14774566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr2 14774567 . A . PASS END=14774567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:51:33:0,51,989:0,51,255:28,0 chr2 14774568 . C . PASS END=14774569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:29,0 chr2 14774570 . T . PASS END=14774571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:43:30:0,43,958:0,43,255:27,0 chr2 14774572 . C . PASS END=14774573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 14774574 . C . PASS END=14774574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 14774575 . C . PASS END=14774576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 14774577 . A . PASS END=14774577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr2 14774578 . G . PASS END=14774578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:26,0 chr2 14774579 . G . PASS END=14774583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 14774584 . A . PASS END=14774589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr2 14774590 . C . PASS END=14774590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:22,0 chr2 14774591 . A . PASS END=14774597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,74,255:25,0 chr2 14774598 . C . PASS END=14774598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:22,0 chr2 14774599 . C . PASS END=14774619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:26:0,67,947:0,67,255:25,0 chr2 14774620 . A . PASS END=14774620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 14774621 . A . PASS END=14774621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 14774622 . C . PASS END=14774622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 14774623 . G . PASS END=14774623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 14774624 . T . PASS END=14774624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 14774625 . G . PASS END=14774647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 14774648 . A . PASS END=14774703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:19,0 chr2 14774704 . G . PASS END=14774705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 14774706 . C . PASS END=14774706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 14774707 . C . PASS END=14774707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 14774708 . T . PASS END=14774714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 14774715 . C . PASS END=14774717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 14774718 . G . PASS END=14774753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:17:0,43,652:0,43,255:19,0 chr2 14774754 . C . PASS END=14774754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 14774755 . T . PASS END=14774788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,621:0,41,255:19,0 chr2 14774789 . G . PASS END=14774810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:24,0 chr2 14774811 . G . PASS END=14774811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 14774812 . C . PASS END=14774821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 14774822 . A . PASS END=14774826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 14774827 . C . PASS END=14774841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,792:0,66,255:22,0 chr2 14774842 . G . PASS END=14774842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 14774843 . T . PASS END=14774843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr2 14774844 . G . PASS END=14774853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 14774854 . G . PASS END=14774854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 14774855 . A . PASS END=14774855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,682:0,22,255:19,0 chr2 14774856 . G . PASS END=14774856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 14774857 . A . PASS END=14774857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:20,0 chr2 14774858 . A . PASS END=14774861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 14774862 . G . PASS END=14774862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:20,0 chr2 14774863 . G . PASS END=14774866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:22,0 chr2 14774867 . A . PASS END=14774867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 14774868 . C . PASS END=14774870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 14774871 . C . PASS END=14774871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 14774872 . G . PASS END=14774874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 14774875 . A . PASS END=14774875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 14774876 . G . PASS END=14774882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 14774883 . C . PASS END=14774884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 14774885 . G . PASS END=14774893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 14774894 . A . PASS END=14774894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr2 14774895 . C . PASS END=14774912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr2 14774913 . C . PASS END=14774916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 14774917 . A . PASS END=14774925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 14774926 . A . PASS END=14774932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 14774933 . G . PASS END=14774941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 14774942 . T . PASS END=14774943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 14774944 . C . PASS END=14774944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 14774945 . T . PASS END=14774945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 14774946 . C . PASS END=14774952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 14774953 . C . PASS END=14774954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 14774955 . C . PASS END=14774955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 14774956 . G . PASS END=14774956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 14774957 . C . PASS END=14774957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 14774958 . C . PASS END=14774982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,665:0,41,255:19,0 chr2 14775327 . A . PASS END=14775329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 14775330 . G . PASS END=14775347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1060:0,84,255:31,0 chr2 14775348 . A . PASS END=14775348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 14775349 . C . PASS END=14775353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 14775354 . A . PASS END=14775354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr2 14775355 . A . PASS END=14775373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1097:0,80,255:32,0 chr2 14775374 . G . PASS END=14775374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 14775375 . G . PASS END=14775404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1209:0,86,255:33,0 chr2 14775405 . A . PASS END=14775405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:16:34:0,16,1047:0,16,255:28,0 chr2 14775406 . G . PASS END=14775408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:31,0 chr2 14775409 . C . PASS END=14775409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:29,0 chr2 14775410 . G . PASS END=14775411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 14775412 . T . PASS END=14775413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 14775414 . G . PASS END=14775415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 14775416 . A . PASS END=14775416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 14775417 . G . PASS END=14775418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 14775419 . C . PASS END=14775419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:25,0 chr2 14775420 . G . PASS END=14775425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:26,0 chr2 14775426 . T . PASS END=14775426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:25,0 chr2 14775427 . G . PASS END=14775427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 14775428 . G . PASS END=14775428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 14775429 . T . PASS END=14775435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:29:0,62,955:0,62,255:25,0 chr2 14775436 . A . PASS END=14775436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:22,0 chr2 14775437 . G . PASS END=14775472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:26:0,65,961:0,65,255:26,0 chr2 14775473 . A . PASS END=14775474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 14775475 . C . PASS END=14775475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 14775476 . G . PASS END=14775476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 14775477 . C . PASS END=14775488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 14775489 . G . PASS END=14775489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 14775490 . A . PASS END=14775491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:28,0 chr2 14775492 . A . PASS END=14775500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:30,0 chr2 14775501 . G . PASS END=14775501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:28,0 chr2 14775502 . T . PASS END=14775519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:32,0 chr2 14775520 . A . PASS END=14775520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr2 14775521 . T . PASS END=14775521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1127:0,82,255:31,0 chr2 14775522 . A . PASS END=14775523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr2 14775524 . T . PASS END=14775534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:32:0,85,1148:0,85,255:36,0 chr2 14775535 . A . PASS END=14775535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:35,0 chr2 14775536 . G . PASS END=14775584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1161:0,80,255:35,0 chr2 14775585 . T . PASS END=14775585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:31,0 chr2 14775586 . C . PASS END=14775610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1058:0,82,255:33,0 chr2 14775611 . G . PASS END=14775612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 14775613 . G . PASS END=14775613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 14775614 . T . PASS END=14775614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 14775615 . T . PASS END=14775622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr2 14775623 . G . PASS END=14775626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 14775627 . G . PASS END=14775629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 14775630 . A . PASS END=14775636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:29:0,77,1139:0,77,255:26,0 chr2 14775637 . A . PASS END=14775639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:29:0,48,810:0,48,255:18,0 chr2 14775640 . G . PASS END=14775655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,65,255:22,0 chr2 14775656 . C . PASS END=14775657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 14775658 . T . PASS END=14775660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 14775661 . C . PASS END=14775667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 14775668 . G . PASS END=14775668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr2 14775669 . G . PASS END=14775669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 14775670 . A . PASS END=14775672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 14775673 . C . PASS END=14775673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr2 14775674 . G . PASS END=14775677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr2 14775678 . G . PASS END=14775685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 14775686 . C . PASS END=14775686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr2 14775687 . A . PASS END=14775691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 14775692 . C . PASS END=14775696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,62,255:20,0 chr2 14775697 . G . PASS END=14775742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr2 14775743 . G . PASS END=14775743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr2 14775744 . G . PASS END=14775768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 14789440 . A . PASS END=14789447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:77:0,120,1800:0,207,255:40,0 chr2 15277528 . T . PASS END=15277569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:67:0,120,1800:0,181,255:40,0 chr2 15307172 . T . PASS END=15307180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 15307181 . G . PASS END=15307211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:19,0 chr2 15307212 . G . PASS END=15307227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 15307228 . G . PASS END=15307294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr2 15307295 . G . PASS END=15307334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 15307335 . G . PASS END=15307335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 15307336 . C . PASS END=15307336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr2 15307337 . C . PASS END=15307355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:34,0 chr2 15307356 . C . PASS END=15307356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:30,0 chr2 15307357 . G . PASS END=15307447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1152:0,90,255:40,0 chr2 15318270 . C . PASS END=15318281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,147,255:40,0 chr2 15319112 . C . PASS END=15319122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,99,1653:0,99,255:40,0 chr2 15319123 . C . PASS END=15319240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,114,1800:0,114,255:40,0 chr2 15326866 . C . PASS END=15327004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:84:38:0,84,1372:0,84,255:40,0 chr2 15330388 . A . PASS END=15330500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:52:0,120,1800:0,139,255:40,0 chr2 15330501 . T . PASS END=15330501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,9:58:24:58:0,24,1490:0,24,255:40,0 chr2 15330502 . T . PASS END=15330527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,114,1710:0,135,255:40,0 chr2 15330529 . T . PASS END=15330529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,111,1665:0,135,255:37,0 chr2 15358897 . C . PASS END=15358914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr2 15358915 . G . PASS END=15358917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:31,0 chr2 15358918 . T . PASS END=15358918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 15358919 . T . PASS END=15358931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1125:0,93,255:32,0 chr2 15358932 . C . PASS END=15358932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr2 15358933 . A . PASS END=15359056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1189:0,88,255:38,0 chr2 15359057 . C . PASS END=15359083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr2 15359084 . A . PASS END=15359092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr2 15372546 . C . PASS END=15372559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,574:0,45,255:18,0 chr2 15372560 . G . PASS END=15372579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 15372580 . C . PASS END=15372589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 15372590 . G . PASS END=15372601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 15372602 . G . PASS END=15372617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr2 15372618 . A . PASS END=15372618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 15372619 . G . PASS END=15372623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 15372624 . G . PASS END=15372635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr2 15372637 . T . PASS END=15372637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 15374669 . C . PASS END=15374675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 15374676 . C . PASS END=15374683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 15374684 . A . PASS END=15374684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 15374685 . T . PASS END=15374689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr2 15374690 . A . PASS END=15374690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 15374691 . T . PASS END=15374695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr2 15374696 . G . PASS END=15374696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 15374697 . C . PASS END=15374697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 15374698 . A . PASS END=15374836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:29:0,82,1102:0,82,255:40,0 chr2 15374837 . A . PASS END=15374846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:70:36:0,70,1080:0,70,255:26,0 chr2 15374847 . G . PASS END=15374849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1215:0,83,255:27,0 chr2 15374850 . G . PASS END=15374852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:26,0 chr2 15374853 . T . PASS END=15374861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 15374862 . G . PASS END=15374871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr2 15378592 . C . PASS END=15378777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:80:32:0,80,1147:0,80,255:40,0 chr2 15378778 . T . PASS END=15378791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:54:0,81,1215:0,124,255:39,0 chr2 15378792 . T . PASS END=15378796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:60:54:0,60,900:0,162,255:25,0 chr2 15378797 . G . PASS END=15378808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:21:45:0,21,315:0,135,255:9,0 chr2 15378809 . A . PASS END=15378810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:15:35:0,15,225:0,105,255:5,0 chr2 15415608 . C . PASS END=15415609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 15415610 . T . PASS END=15415623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 15415624 . G . PASS END=15415624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 15415625 . G . PASS END=15415636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,685:0,63,255:24,0 chr2 15415637 . C . PASS END=15415637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,866:0,59,255:24,0 chr2 15415638 . T . PASS END=15415638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:24,0 chr2 15415639 . G . PASS END=15415642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 15415643 . C . PASS END=15415643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 15415644 . T . PASS END=15415644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr2 15415645 . A . PASS END=15415697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:88:32:0,88,1144:0,88,255:40,0 chr2 15415698 . A . PASS END=15415698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1459:0,71,255:40,0 chr2 15415699 . T . PASS END=15415752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,104,1504:0,104,255:40,0 chr2 15415753 . G . PASS END=15415753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:77:49:0,77,1565:0,77,255:40,0 chr2 15415754 . G . PASS END=15415754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,7:50:34:50:0,34,1341:0,34,255:39,0 chr2 15415755 . G . PASS END=15415755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:28:50:0,28,1390:0,28,255:40,0 chr2 15415756 . T . PASS END=15415756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:44:47:0,44,1352:0,44,255:40,0 chr2 15415757 . C . PASS END=15415942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:44:0,101,1665:0,101,255:40,0 chr2 15416975 . C . PASS END=15417225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1272:0,92,255:40,0 chr2 15417230 . A . PASS END=15417230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:31,0 chr2 15427197 . C . PASS END=15427244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,108,1329:0,108,255:40,0 chr2 15427245 . C A, 48.02 PASS DP=49;MQ=249.41;MQRankSum=5.299;ReadPosRankSum=2.512;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,20,0:0.408,0.000:49:16,11,0:13,9,0:46:83,0,47,183,183,183:255,0,255:28,0:4.8023e+01,1.1183e-04,5.0000e+01,1.8279e+02,2.1756e+02,1.8580e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,15,12,8:17,12,9,11 chr2 15427246 . G . PASS END=15427282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:39:0,101,1404:0,101,255:40,0 chr2 15427283 . G . PASS END=15427307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:34:0,94,1228:0,94,255:35,0 chr2 15432661 . T . PASS END=15432830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:34:0,84,1219:0,88,255:40,0 chr2 15432831 . T . PASS END=15432831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:28,0 chr2 15432832 . T . PASS END=15432844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 15432845 . G . PASS END=15432845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr2 15432846 . A . PASS END=15432852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1053:0,71,255:26,0 chr2 15432853 . T . PASS END=15432853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:23,0 chr2 15432854 . G . PASS END=15432864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,894:0,64,255:25,0 chr2 15432865 . A . PASS END=15432865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:20,0 chr2 15432866 . T . PASS END=15432868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,74,255:21,0 chr2 15432869 . T . PASS END=15432869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:21,0 chr2 15432870 . G . PASS END=15432876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:23,0 chr2 15432877 . T . PASS END=15432877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,699:0,52,255:21,0 chr2 15432878 . C . PASS END=15432881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 15432882 . G . PASS END=15432882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 15432883 . G . PASS END=15432890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 15448340 . C . PASS END=15448340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 15448341 . C . PASS END=15448348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,831:0,66,255:25,0 chr2 15448349 . A . PASS END=15448349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:24,0 chr2 15448350 . G . PASS END=15448454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1057:0,80,255:37,0 chr2 15448455 . A . PASS END=15448473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,65,255:25,0 chr2 15448474 . A . PASS END=15448477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr2 15449295 . T . PASS END=15449371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,101,1576:0,101,255:40,0 chr2 15467874 . C . PASS END=15467994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:54:0,117,1755:0,142,255:40,0 chr2 15468323 . C . PASS END=15468436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,166,255:40,0 chr2 15470722 . C . PASS END=15470882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:84:39:0,84,1260:0,101,255:40,0 chr2 15470883 . C . PASS END=15470883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:28,0 chr2 15470884 . T . PASS END=15470889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1260:0,89,255:28,0 chr2 15492116 . C . PASS END=15492204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,171,255:40,0 chr2 15492205 . T . PASS END=15492205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 15493677 . T . PASS END=15493828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:34:0,84,1150:0,85,255:40,0 chr2 15493829 . G . PASS END=15493834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,990:0,79,255:26,0 chr2 15496427 . C . PASS END=15496540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:59:0,120,1800:0,161,255:40,0 chr2 15506704 . C . PASS END=15506817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:36:0,93,1395:0,108,255:40,0 chr2 15514732 . C . PASS END=15514844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:35:0,81,1215:0,92,255:40,0 chr2 15519726 . C . PASS END=15519776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:32:0,82,1209:0,82,255:40,0 chr2 15519777 . T . PASS END=15519813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:47:0,84,1726:0,84,255:40,2 chr2 15519814 . C T, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.177;ReadPosRankSum=-1.492;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,26,0:0.500,0.000:52:4,17,0:22,9,0:48:85,0,50,864,922,1786:255,0,255:26,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,14,12:13,13,15,11 chr2 15519815 . G . PASS END=15519851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:51:0,115,1800:0,115,255:40,0 chr2 15519852 . A . PASS END=15519937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:90:35:0,90,1382:0,90,255:40,0 chr2 15519938 . A . PASS END=15519938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:30,0 chr2 15519939 . A . PASS END=15519943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:32,0 chr2 15519944 . T . PASS END=15519950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr2 15519951 . A . PASS END=15519954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 15519955 . T . PASS END=15519955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 15523339 . C . PASS END=15523353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:34,0 chr2 15523354 . A . PASS END=15523434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:34:0,95,1311:0,95,255:40,0 chr2 15523435 . A . PASS END=15523435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1138:0,69,255:33,0 chr2 15523436 . G . PASS END=15523436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 15523437 . G . PASS END=15523437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:32,0 chr2 15523438 . C . PASS END=15523441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:33,0 chr2 15533788 . T . PASS END=15533816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,143,255:40,0 chr2 15533817 . C . PASS END=15533833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,155,255:40,0 chr2 15533834 . A . PASS END=15533851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,120,1669:0,120,255:40,0 chr2 15534351 . T . PASS END=15534473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:37:0,98,1380:0,98,255:40,0 chr2 15536537 . C . PASS END=15536552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:88:0,120,1800:0,209,255:40,0 chr2 15536553 . G . PASS END=15536599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:85:0,120,1800:0,212,255:40,0 chr2 15542292 . C . PASS END=15542309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:38:0,87,1361:0,87,255:40,0 chr2 15542310 . A . PASS END=15542310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1421:0,57,255:40,0 chr2 15542311 . G . PASS END=15542419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1148:0,82,255:40,0 chr2 15542420 . C . PASS END=15542421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:25,0 chr2 15542422 . G . PASS END=15542422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1002:0,38,255:24,0 chr2 15542423 . C . PASS END=15542425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 15555670 . A . PASS END=15555843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:33:0,87,1152:0,94,255:40,0 chr2 15557651 . A . PASS END=15557834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:30:0,81,1215:0,89,255:40,0 chr2 15557835 . A . PASS END=15557835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 15557836 . C . PASS END=15557836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 15564439 . C . PASS END=15564441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:28,0 chr2 15564442 . C . PASS END=15564442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 15564443 . C . PASS END=15564444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 15564445 . A . PASS END=15564445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 15564446 . G . PASS END=15564592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:80:31:0,80,1125:0,80,255:40,0 chr2 15567431 . C . PASS END=15567431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1394:0,111,255:37,0 chr2 15567835 . C . PASS END=15567839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 15567840 . A . PASS END=15567847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:29,0 chr2 15567848 . C . PASS END=15567848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 15567849 . C . PASS END=15567850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 15567851 . C . PASS END=15567851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 15567852 . G . PASS END=15567870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1142:0,80,255:32,0 chr2 15567871 . T . PASS END=15567871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:31,0 chr2 15567872 . G . PASS END=15567906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1176:0,83,255:33,0 chr2 15567907 . T . PASS END=15567907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 15567908 . C . PASS END=15567917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 15567918 . A . PASS END=15567918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:26,0 chr2 15592171 . A . PASS END=15592310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:55:0,120,1800:0,134,255:40,0 chr2 15601325 . C . PASS END=15601330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,114,1435:0,114,255:40,0 chr2 15601331 . T . PASS END=15601403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,120,1800:0,126,255:40,0 chr2 15601404 . G . PASS END=15601440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,127,255:40,0 chr2 15601441 . C T, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.103;ReadPosRankSum=0.750;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,30,0:0.577,0.000:52:9,11,0:13,19,0:46:85,0,46,185,185,185:255,0,255:19,0:5.0000e+01,1.0355e-04,4.8597e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,9,19,11:10,12,14,16 chr2 15601442 . A . PASS END=15601461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:38:0,84,1260:0,114,255:40,0 chr2 15601811 . C . PASS END=15601907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:43:0,81,1215:0,125,255:40,0 chr2 15601908 . A . PASS END=15601909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:78:42:0,78,1170:0,113,255:26,0 chr2 15601910 . G . PASS END=15601915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:29,0 chr2 15607453 . C . PASS END=15607531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:70:0,104,1800:0,104,255:40,0 chr2 15607788 . T . PASS END=15607922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:37:0,90,1350:0,111,255:40,0 chr2 15607923 . G . PASS END=15607923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1288:0,59,255:29,0 chr2 15607924 . T . PASS END=15607928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:37:0,84,1350:0,84,255:31,0 chr2 15608506 . C . PASS END=15608657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:82:40:0,82,1435:0,82,255:40,0 chr2 15613346 . C . PASS END=15613471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,120,1800:0,128,255:40,0 chr2 15614191 . C . PASS END=15614191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 15614192 . T . PASS END=15614194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 15614195 . C . PASS END=15614195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,841:0,47,255:23,0 chr2 15614196 . T . PASS END=15614203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1014:0,68,255:26,0 chr2 15614204 . A . PASS END=15614206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 15614207 . T . PASS END=15614207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 15614208 . C . PASS END=15614221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,958:0,81,255:33,0 chr2 15614222 . G . PASS END=15614222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:30,0 chr2 15614223 . A . PASS END=15614366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1244:0,83,255:40,0 chr2 15614367 . A . PASS END=15614403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:38:0,87,1305:0,96,255:40,0 chr2 15614404 . T C, 50.00 PASS DP=38;MQ=250.00;MQRankSum=4.985;ReadPosRankSum=0.738;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,25,0:0.658,0.000:38:7,10,0:6,15,0:44:85,0,42,860,454,1314:255,0,255:11,0:5.0000e+01,1.8587e-04,4.4841e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,13,12:6,7,12,13 chr2 15614405 . C . PASS END=15614411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1066:0,82,255:29,0 chr2 15614412 . C . PASS END=15614418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,972:0,73,255:26,0 chr2 15614419 . A . PASS END=15614419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,998:0,35,255:22,0 chr2 15614420 . G . PASS END=15614433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:26:0,65,944:0,65,255:25,0 chr2 15614434 . A . PASS END=15614435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 15614436 . G . PASS END=15614438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:20,0 chr2 15614439 . T . PASS END=15614441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr2 15614442 . T . PASS END=15614448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,61,255:19,0 chr2 15615811 . C . PASS END=15615811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 15615812 . T . PASS END=15615812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 15615813 . C . PASS END=15615814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr2 15615815 . A . PASS END=15615815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 15615816 . A . PASS END=15615816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 15615817 . A . PASS END=15615817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr2 15615818 . C . PASS END=15615824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 15615825 . A . PASS END=15615825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 15615826 . T . PASS END=15615828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 15615829 . C . PASS END=15615829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 15615830 . C . PASS END=15615833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1103:0,87,255:31,0 chr2 15615834 . C . PASS END=15615835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,996:0,77,255:31,0 chr2 15615836 . T . PASS END=15615872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:32:0,96,1156:0,96,255:40,0 chr2 15615873 . C . PASS END=15615909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,126,255:40,0 chr2 15615910 . A G, 47.91 PASS DP=59;MQ=250.00;MQRankSum=6.512;ReadPosRankSum=6.036;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,25,0:0.424,0.000:59:14,11,0:20,14,0:47:83,0,50,837,1179,2016:255,0,255:33,0:4.7910e+01,9.1896e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,19,13,12:23,11,15,10 chr2 15615911 . G . PASS END=15615947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:57:0,120,1800:0,164,255:40,0 chr2 15615948 . T . PASS END=15615975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:50:0,120,1800:0,129,255:40,0 chr2 15615976 . A . PASS END=15615998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:38:0,81,1215:0,114,255:40,0 chr2 15615999 . C . PASS END=15616004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:33:0,63,945:0,82,255:26,0 chr2 15618350 . C . PASS END=15618376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:64:0,120,1800:0,156,255:40,0 chr2 15618377 . A . PASS END=15618413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,174,255:40,0 chr2 15623481 . T . PASS END=15623492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:66:0,120,1800:0,185,255:40,0 chr2 15629018 . C . PASS END=15629146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1156:0,83,255:40,0 chr2 15644269 . C . PASS END=15644337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,165,255:40,0 chr2 15651336 . T . PASS END=15651473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:28:0,83,1064:0,83,255:40,0 chr2 15651474 . T . PASS END=15651474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:27,0 chr2 15674667 . C . PASS END=15674765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,161,255:40,0 chr2 15676542 . C . PASS END=15676553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:25,0 chr2 15676554 . C . PASS END=15676648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:32:0,90,1166:0,92,255:40,1 chr2 15676649 . G . PASS END=15676675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:46:0,90,1350:0,121,255:40,0 chr2 15679347 . C . PASS END=15679470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:33:0,87,1158:0,88,255:40,0 chr2 15679471 . T . PASS END=15679471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,865:0,56,255:26,0 chr2 15679472 . C . PASS END=15679475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 15679476 . C . PASS END=15679480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,70,255:25,0 chr2 15691617 . C . PASS END=15691660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:90:0,120,1800:0,220,255:40,0 chr2 15693549 . C . PASS END=15693597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:50:0,120,1800:0,134,255:40,0 chr2 15694185 . C . PASS END=15694207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:63:0,120,1800:0,156,255:40,0 chr2 15694208 . T . PASS END=15694262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,197,255:40,0 chr2 15696907 . C . PASS END=15696943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:75:0,120,1800:0,220,255:40,0 chr2 15698704 . C . PASS END=15698758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,184,255:40,1 chr2 15701312 . C . PASS END=15701319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr2 15701320 . C . PASS END=15701320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 15701321 . A . PASS END=15701362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:28:0,83,1056:0,83,255:32,0 chr2 15701363 . A . PASS END=15701363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr2 15701364 . A . PASS END=15701369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr2 15701370 . T . PASS END=15701370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:25,0 chr2 15701371 . C . PASS END=15701379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 15701380 . C . PASS END=15701388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,83,255:25,0 chr2 15701389 . T . PASS END=15701406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:17:0,48,720:0,51,255:19,0 chr2 15701407 . G . PASS END=15701407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 15701408 . C . PASS END=15701420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 15701421 . G . PASS END=15701424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 15701425 . C . PASS END=15701428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 15732058 . A . PASS END=15732073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:10,0 chr2 15735269 . A . PASS END=15735320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,132,255:40,0 chr2 15735614 . C . PASS END=15735647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:61:0,120,1800:0,162,255:40,0 chr2 15735648 . T C, 47.60 PASS DP=73;MQ=249.92;MQRankSum=7.226;ReadPosRankSum=3.179;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,30,0:0.411,0.000:73:19,11,0:24,19,0:47:82,0,50,1049,1441,2489:255,0,255:40,0:4.7604e+01,9.7073e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,24,9,21:21,22,18,12 chr2 15735649 . T . PASS END=15735677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,140,255:40,0 chr2 15736858 . G . PASS END=15736887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,2:100:99:91:0,120,1800:0,255,255:40,0 chr2 15737499 . G . PASS END=15737517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,174,255:40,0 chr2 15737518 . T . PASS END=15737595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,186,255:40,0 chr2 15739277 . A . PASS END=15739292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:98:0,120,1800:0,255,255:40,0 chr2 15739793 . T . PASS END=15739840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:67:0,120,1800:0,174,255:40,0 chr2 15742672 . C . PASS END=15742755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,120,1800:0,124,255:40,0 chr2 15743316 . G . PASS END=15743399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1800:0,143,255:40,0 chr2 15743938 . G . PASS END=15744014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:88:0,120,1800:0,235,255:40,0 chr2 15744561 . G . PASS END=15744633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:59:0,120,1800:0,142,255:40,0 chr2 15746074 . G . PASS END=15746150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:67:0,120,1800:0,165,255:40,0 chr2 15746274 . A . PASS END=15746388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:45:0,105,1575:0,135,255:40,0 chr2 15747299 . G . PASS END=15747355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,182,255:40,0 chr2 15747356 . T . PASS END=15747392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:70:0,120,1800:0,163,255:40,0 chr2 15747393 . C T, 251.18 PASS DP=68;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,28,0:0,40,0:201:289,204,0,2567,204,2567:255,210,0:0,0:2.5118e+02,2.0118e+02,0.0000e+00,4.5000e+02,2.3595e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,31:0,0,29,39 chr2 15747394 . A . PASS END=15747430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:99:48:0,105,1654:0,105,255:40,0 chr2 15747431 . A . PASS END=15747437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:43:0,102,1530:0,127,255:40,0 chr2 15753348 . G . PASS END=15753350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,140,255:40,0 chr2 15753351 . G . PASS END=15753408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,119,1800:0,119,255:40,0 chr2 15757368 . G . PASS END=15757377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:32:0,96,1178:0,96,255:40,0 chr2 15757378 . T . PASS END=15757378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1459:0,74,255:40,0 chr2 15757379 . T . PASS END=15757466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,108,1562:0,118,255:40,0 chr2 15758305 . G . PASS END=15758330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:71:0,120,1800:0,195,255:40,0 chr2 15758331 . T . PASS END=15758394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,152,255:40,0 chr2 15760332 . G . PASS END=15760520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:40:0,87,1293:0,103,255:40,0 chr2 15761189 . A . PASS END=15761240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,169,255:40,0 chr2 15763560 . A . PASS END=15763698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:93:37:0,93,1395:0,104,255:40,0 chr2 15763699 . A . PASS END=15763700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:36:0,72,1302:0,72,255:30,0 chr2 15763701 . G . PASS END=15763706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,92,255:29,0 chr2 15767178 . G . PASS END=15767269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,149,255:40,0 chr2 15768569 . A . PASS END=15768641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,148,255:40,0 chr2 15768762 . T . PASS END=15768801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,137,255:40,0 chr2 15768802 . A . PASS END=15768834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:59:0,84,1260:0,148,255:40,0 chr2 15768921 . G . PASS END=15768963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,182,255:40,0 chr2 15769726 . G . PASS END=15769821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:44:0,93,1395:0,115,255:40,0 chr2 15770114 . T . PASS END=15770234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:46:0,120,1800:0,125,255:40,0 chr2 15770900 . G . PASS END=15771030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:34:0,90,1274:0,90,255:40,0 chr2 16080709 . A . PASS END=16080709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 16080710 . T . PASS END=16080720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:23,0 chr2 16080721 . C . PASS END=16080793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:28:0,84,1025:0,84,255:40,0 chr2 16080794 . A . PASS END=16080794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1144:0,67,255:36,0 chr2 16080795 . C . PASS END=16080816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1178:0,100,255:39,0 chr2 16080817 . G . PASS END=16080817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1377:0,52,255:36,0 chr2 16080818 . G . PASS END=16080831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,101,1349:0,101,255:40,0 chr2 16080832 . G . PASS END=16080832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1301:0,78,255:38,0 chr2 16080833 . A . PASS END=16080834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1443:0,93,255:38,0 chr2 16080835 . T . PASS END=16080836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1321:0,76,255:37,0 chr2 16080837 . G . PASS END=16080839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:85:41:0,85,1262:0,85,255:38,0 chr2 16080840 . T . PASS END=16080840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1215:0,73,255:34,0 chr2 16080841 . C . PASS END=16080843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1338:0,103,255:36,0 chr2 16080844 . G . PASS END=16080844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1343:0,73,255:34,0 chr2 16080845 . A . PASS END=16080855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1203:0,81,255:31,0 chr2 16080856 . T . PASS END=16080856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1130:0,66,255:31,0 chr2 16080857 . C . PASS END=16080857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 16080858 . G . PASS END=16080858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:28,0 chr2 16080859 . G . PASS END=16080859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 16080860 . C . PASS END=16080863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:24,0 chr2 16080864 . A . PASS END=16080864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1008:0,49,255:21,0 chr2 16080865 . G . PASS END=16080865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,945:0,79,255:21,0 chr2 16082070 . T . PASS END=16082090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,582:0,51,255:18,0 chr2 16082091 . C . PASS END=16082091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 16082092 . C . PASS END=16082100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,676:0,54,255:18,0 chr2 16082101 . G . PASS END=16082101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 16082102 . C . PASS END=16082112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 16082113 . G . PASS END=16082114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082115 . A . PASS END=16082117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,609:0,43,255:19,0 chr2 16082118 . G . PASS END=16082118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082119 . A . PASS END=16082120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr2 16082121 . G . PASS END=16082121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082122 . C . PASS END=16082122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 16082123 . A . PASS END=16082128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 16082129 . G . PASS END=16082129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:19,0 chr2 16082130 . G . PASS END=16082130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 16082131 . T . PASS END=16082131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:18,0 chr2 16082132 . A . PASS END=16082134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 16082135 . A . PASS END=16082135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,648:0,49,255:19,0 chr2 16082136 . A . PASS END=16082138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 16082139 . C . PASS END=16082139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:19,0 chr2 16082140 . G . PASS END=16082141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 16082142 . A . PASS END=16082143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 16082144 . G . PASS END=16082144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,656:0,63,255:21,0 chr2 16082145 . G . PASS END=16082156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,699:0,49,255:19,0 chr2 16082157 . G . PASS END=16082158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 16082159 . C . PASS END=16082159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:19,0 chr2 16082160 . C . PASS END=16082162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082163 . A . PASS END=16082163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 16082164 . G . PASS END=16082164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082165 . T . PASS END=16082165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 16082166 . C . PASS END=16082166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 16082167 . G . PASS END=16082167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 16082168 . C . PASS END=16082169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 16082170 . G . PASS END=16082206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,660:0,44,255:19,0 chr2 16082207 . C . PASS END=16082226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,868:0,63,255:23,0 chr2 16082227 . G . PASS END=16082227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr2 16082228 . C . PASS END=16082231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 16082232 . A . PASS END=16082232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:20,0 chr2 16082233 . A . PASS END=16082246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr2 16082247 . T . PASS END=16082247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:21,0 chr2 16082248 . T . PASS END=16082250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 16082251 . A . PASS END=16082255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,55,255:19,0 chr2 16082256 . C . PASS END=16082258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 16082259 . C . PASS END=16082260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 16082261 . G . PASS END=16082261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:19,0 chr2 16082262 . C . PASS END=16082262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 16082263 . C . PASS END=16082295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr2 16082296 . T . PASS END=16082296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 16082297 . C . PASS END=16082310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 16082311 . C . PASS END=16082312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 16082313 . A . PASS END=16082313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 16082314 . C . PASS END=16082316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 16082317 . C . PASS END=16082319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 16082320 . C . PASS END=16082320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr2 16082321 . G . PASS END=16082324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 16082325 . G . LowGQ END=16082325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,728:14,0,255:18,0 chr2 16082326 . A . PASS END=16082326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082327 . G . PASS END=16082327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 16082328 . G . PASS END=16082328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082329 . A . PASS END=16082331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 16082332 . T . PASS END=16082333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 16082334 . T . PASS END=16082334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 16082335 . G . PASS END=16082335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr2 16082336 . G . PASS END=16082365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:18:0,44,720:0,44,255:19,0 chr2 16082366 . G . PASS END=16082366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 16082367 . C . PASS END=16082390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,690:0,44,255:19,0 chr2 16082391 . G . PASS END=16082397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr2 16082398 . G . PASS END=16082399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 16082400 . T . PASS END=16082400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr2 16082401 . C . PASS END=16082413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 16082414 . C . PASS END=16082417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 16082418 . G . PASS END=16082438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr2 16082439 . A . PASS END=16082439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 16082440 . A . PASS END=16082440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 16082441 . C . PASS END=16082446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 16082447 . G . PASS END=16082447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 16082448 . T . PASS END=16082454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 16082455 . G . PASS END=16082455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 16082456 . C . PASS END=16082458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 16082459 . G . PASS END=16082459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr2 16082460 . G . PASS END=16082467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 16082468 . G . PASS END=16082468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 16082469 . G . PASS END=16082469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 16082470 . A . PASS END=16082472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 16082473 . C . PASS END=16082475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 16082476 . T . PASS END=16082476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 16082477 . C . PASS END=16082478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 16082479 . G . PASS END=16082480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 16082481 . C . PASS END=16082490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 16082491 . T . PASS END=16082517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,288:0,24,255:9,0 chr2 16082518 . T . PASS END=16082582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr2 16082583 . A . LowGQ END=16082583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 16082584 . A . PASS END=16082592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr2 16082593 . A . PASS END=16082596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr2 16082597 . C . PASS END=16082600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr2 16082601 . G . LowGQ END=16082679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,22:0,0,33:3,0 chr2 16082680 . C . PASS END=16082700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr2 16082701 . G . PASS END=16082744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr2 16082745 . G . PASS END=16082783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:11,0 chr2 16082784 . C . PASS END=16082784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 16082785 . G . PASS END=16082789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 16082790 . C . PASS END=16082790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 16082791 . C . PASS END=16082792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 16082793 . G . PASS END=16082802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 16082803 . C . PASS END=16082803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 16082804 . C . PASS END=16082805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 16082806 . C . PASS END=16082806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:6,0 chr2 16082807 . A . PASS END=16082811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 16082812 . C . PASS END=16082812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr2 16082813 . G . PASS END=16082816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 16082817 . A . PASS END=16082840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,205:6,0 chr2 16082841 . G . PASS END=16082841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 16082842 . T . PASS END=16082842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr2 16082843 . C . PASS END=16082845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,210:3,0 chr2 16082846 . C . PASS END=16082909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 16082910 . C . PASS END=16082944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 16082945 . T . PASS END=16082949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 16082950 . C . PASS END=16082950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 16082951 . C . PASS END=16082961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:6,0 chr2 16082962 . C . PASS END=16082962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 16082963 . C . PASS END=16082968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 16082969 . C . PASS END=16082969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr2 16082970 . G . PASS END=16082977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 16085612 . C . PASS END=16085612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 16085615 . A . PASS END=16085630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1109:0,82,255:36,0 chr2 16085631 . A . PASS END=16085631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:34,0 chr2 16085632 . G . PASS END=16085632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1366:0,111,255:37,0 chr2 16085633 . A . PASS END=16085633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:35,0 chr2 16085634 . G . PASS END=16085823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:34:0,90,1350:0,94,255:40,0 chr2 16085824 . G . PASS END=16085824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:30,0 chr2 16085825 . C . PASS END=16085837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1203:0,82,255:32,0 chr2 16085838 . C . PASS END=16085838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1139:0,66,255:27,0 chr2 16085839 . G . PASS END=16085839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 16085840 . T . PASS END=16085845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,80,255:25,0 chr2 16085846 . G . PASS END=16085847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 16085848 . G . PASS END=16085897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,860:0,61,255:26,0 chr2 16085898 . G . PASS END=16085898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 16085899 . C . PASS END=16085900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 16085901 . C . PASS END=16085903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 16085904 . G . PASS END=16085905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 16085906 . G . PASS END=16085925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1156:0,83,255:31,0 chr2 16085926 . A . PASS END=16085926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 16085927 . A . PASS END=16085928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 16085929 . A . PASS END=16085929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr2 16085930 . G . PASS END=16085932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 16085933 . T . PASS END=16085933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 16085934 . G . PASS END=16085963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1032:0,87,255:29,0 chr2 16085964 . T . PASS END=16085964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 16085965 . G . PASS END=16085999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1186:0,83,255:33,0 chr2 16086000 . G . PASS END=16086000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 16086001 . C . PASS END=16086049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1163:0,80,255:34,0 chr2 16086050 . C . PASS END=16086050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:28,0 chr2 16086051 . G . PASS END=16086126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1134:0,90,255:35,0 chr2 16086127 . G . PASS END=16086127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:31,0 chr2 16086128 . C . PASS END=16086168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1275:0,95,255:38,0 chr2 16086169 . G . PASS END=16086169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:37,0 chr2 16086170 . C . PASS END=16086205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1267:0,92,255:39,0 chr2 16086206 . C . PASS END=16086206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:27,0 chr2 16086207 . T . PASS END=16086211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,95,255:28,0 chr2 16086212 . C . PASS END=16086215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,83,255:26,0 chr2 16086216 . C . PASS END=16086219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:28,0 chr2 16734204 . C . PASS END=16734267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,121,255:40,0 chr2 16736337 . C . PASS END=16736351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:28,0 chr2 16736352 . A . PASS END=16736355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,1035:0,60,255:25,0 chr2 16736356 . C . PASS END=16736407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1235:0,81,255:39,0 chr2 16740728 . A . PASS END=16740854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:43:0,108,1620:0,129,255:40,0 chr2 16742258 . G . PASS END=16742337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,149,255:40,0 chr2 16742429 . T . PASS END=16742545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,121,255:40,0 chr2 16742724 . G . PASS END=16742801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,164,255:40,0 chr2 16743273 . C . PASS END=16743379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:33:0,81,1215:0,83,255:40,0 chr2 16743380 . G . PASS END=16743380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr2 16743381 . A . PASS END=16743389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1164:0,85,255:30,0 chr2 16743390 . T . PASS END=16743391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 16743392 . A . PASS END=16743392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 16743393 . A . PASS END=16743409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:24,0 chr2 16745257 . C . PASS END=16745362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:61:0,120,1800:0,167,255:40,0 chr2 16746914 . A . PASS END=16746934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,105,1415:0,114,255:39,0 chr2 16746935 . G . PASS END=16747029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1215:0,90,255:40,0 chr2 16747030 . G . PASS END=16747030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 16747031 . A . PASS END=16747033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 16747034 . A . PASS END=16747035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:26,0 chr2 16769318 . T . PASS END=16769387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,122,255:40,0 chr2 17692071 . T . PASS END=17692222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:44:0,98,1604:0,98,255:40,2 chr2 17695279 . C . PASS END=17695359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:88:0,120,1800:0,163,255:40,1 chr2 17696436 . C . PASS END=17696535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,107,1399:0,107,255:40,0 chr2 17696536 . T . PASS END=17696572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,146,255:40,0 chr2 17696573 . C T, 49.77 PASS DP=60;MQ=250.00;MQRankSum=6.580;ReadPosRankSum=2.072;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,28,0:0.475,0.000:59:18,12,0:13,16,0:48:85,0,50,928,1037,1965:255,0,255:29,0:4.9769e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,12,10,18:20,11,14,14 chr2 17696574 . C . PASS END=17696610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,143,255:40,0 chr2 17696611 . T . PASS END=17698640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:57:0,120,1800:0,133,255:40,2 chr2 17698641 . A . PASS END=17698677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:68:0,120,1800:0,172,255:40,0 chr2 17698678 . A G, 50.00 PASS DP=76;MQ=249.23;MQRankSum=7.084;ReadPosRankSum=4.810;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,43,0:0.566,0.000:76:15,19,0:18,24,0:48:85,0,49,1521,1180,2701:255,0,255:33,0:5.0000e+01,7.4034e-05,5.1535e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,15,25,18:16,17,19,24 chr2 17698679 . C . PASS END=17698715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:77:0,120,1800:0,169,255:40,2 chr2 17698716 . A . PASS END=17699198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,102,1340:0,102,255:40,0 chr2 17699199 . T . PASS END=17699199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1445:0,60,255:36,0 chr2 17699200 . G . PASS END=17699233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1305:0,95,255:38,0 chr2 17699234 . C . PASS END=17699234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:32,0 chr2 17699235 . T . PASS END=17699260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1155:0,80,255:34,0 chr2 17699261 . T . PASS END=17699263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1170:0,79,255:26,0 chr2 17699264 . C . PASS END=17699264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:27,0 chr2 17699265 . T . PASS END=17699268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:32:0,75,1125:0,96,255:26,0 chr2 17699269 . A . PASS END=17699277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 17699278 . T . PASS END=17699279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:31:0,63,1139:0,63,255:32,0 chr2 17699280 . C . PASS END=17699561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1119:0,83,255:40,0 chr2 17699562 . G . PASS END=17699564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:31:0,78,1170:0,83,255:26,0 chr2 17699565 . C . PASS END=17699606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1028:0,93,255:33,0 chr2 17699607 . G . PASS END=17699610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:26,0 chr2 17699611 . C . PASS END=17699618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,92,255:29,0 chr2 17699619 . G . PASS END=17699620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:28,0 chr2 17699621 . G . PASS END=17699622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 17699623 . T . PASS END=17699624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr2 17699625 . A . PASS END=17699627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 17699628 . A . PASS END=17699633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 17699634 . T . PASS END=17699635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 17699636 . G . PASS END=17699655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 17699656 . C . PASS END=17699656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 17699657 . C . PASS END=17699663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 17699664 . T . PASS END=17699666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 17699667 . G . PASS END=17699675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr2 17699676 . G . PASS END=17699682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 17773342 . A . PASS END=17773349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1186:0,83,255:34,0 chr2 17773350 . G . PASS END=17773350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1149:0,55,255:32,0 chr2 17773351 . C . PASS END=17773493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:34:0,80,1058:0,80,255:40,0 chr2 17773494 . C . PASS END=17773503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:31:0,66,990:0,77,255:23,0 chr2 17830677 . T . PASS END=17830677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 17830678 . T . PASS END=17830679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr2 17830680 . T . PASS END=17830683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 17830684 . C . PASS END=17830685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 17830686 . T . PASS END=17830686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 17830687 . A . PASS END=17830691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 17830692 . G . PASS END=17830692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 17830693 . A . PASS END=17830703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1017:0,84,255:30,0 chr2 17830704 . T . PASS END=17830705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:28,0 chr2 17830706 . T . PASS END=17830722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1158:0,80,255:32,0 chr2 17830723 . G . PASS END=17830723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr2 17830724 . A . PASS END=17830727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:31,0 chr2 17830728 . T . PASS END=17830728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr2 17830729 . T . PASS END=17830733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr2 17830734 . A . PASS END=17830734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 17830735 . A . PASS END=17830737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:32,0 chr2 17830738 . A . PASS END=17830738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr2 17830739 . T . PASS END=17830751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1174:0,96,255:32,0 chr2 17830752 . A . PASS END=17830752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:29,0 chr2 17830753 . T . PASS END=17830757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr2 17830758 . T . PASS END=17830758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:28,0 chr2 17830759 . T . PASS END=17830764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1225:0,86,255:32,0 chr2 17830765 . A . PASS END=17830765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr2 17830766 . G . PASS END=17830779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:33,0 chr2 17830780 . T . PASS END=17830780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:30,0 chr2 17830781 . G . PASS END=17830785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1279:0,89,255:30,0 chr2 17830786 . T . PASS END=17830786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:27,0 chr2 17830787 . C . PASS END=17830787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 17830788 . A . PASS END=17830789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr2 17830790 . C . PASS END=17830793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:27,0 chr2 17830794 . A . PASS END=17830796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1025:0,63,255:23,0 chr2 17830797 . G . PASS END=17830798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:29:0,57,855:0,87,255:19,0 chr2 17830799 . C . PASS END=17830809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:21,0 chr2 17830810 . A . PASS END=17830814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,767:0,50,255:19,0 chr2 17830815 . C . PASS END=17830815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 17830816 . T . PASS END=17830830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 17830831 . A . PASS END=17830831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,621:0,21,255:19,0 chr2 17830832 . T . PASS END=17830832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr2 17830833 . A . PASS END=17830833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr2 17830834 . T . PASS END=17830835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 17830836 . T . PASS END=17830836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:17,0 chr2 17830837 . A . PASS END=17830862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,623:0,43,255:18,0 chr2 17830863 . A . PASS END=17830863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 17830864 . C . PASS END=17830890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr2 17830891 . A . PASS END=17830892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 17831048 . C . PASS END=17831049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 17831050 . C . PASS END=17831051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 17831052 . G . PASS END=17831092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,613:0,44,255:19,0 chr2 17831093 . G . PASS END=17831126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:22,0 chr2 17831127 . C . PASS END=17831135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 17831136 . A . PASS END=17831136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 17831137 . T . PASS END=17831139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 17831140 . C . PASS END=17831144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 17831145 . G . PASS END=17831150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 17831151 . G . PASS END=17831156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 17831157 . C . PASS END=17831228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,537:0,42,255:19,0 chr2 17831229 . G . PASS END=17831231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 17831232 . T . PASS END=17831252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr2 17831253 . A . PASS END=17831277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr2 17836464 . G . PASS END=17836661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:80:32:0,80,1139:0,80,255:40,0 chr2 17846766 . T . PASS END=17846880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:43:0,84,1530:0,84,255:40,0 chr2 17847687 . C . PASS END=17847784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:40:0,113,1466:0,113,255:40,0 chr2 17851690 . C . PASS END=17851805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:31:0,90,1111:0,93,255:40,0 chr2 17851806 . C . PASS END=17851806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 17851807 . A . PASS END=17851820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1127:0,93,255:32,0 chr2 17851821 . T . PASS END=17851821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr2 17851822 . A . PASS END=17851825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 17851826 . C . PASS END=17851842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,79,255:25,0 chr2 17860126 . T . PASS END=17860231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,146,255:40,0 chr2 17863310 . T . PASS END=17863366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,186,255:40,0 chr2 17864905 . C . PASS END=17865030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:68:0,120,1800:0,183,255:40,0 chr2 17876419 . C . PASS END=17876564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:93:47:0,93,1351:0,93,255:40,0 chr2 17877556 . C . PASS END=17877693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:83:45:0,83,1374:0,83,255:40,0 chr2 17881475 . C . PASS END=17881645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:70:0,120,1800:0,195,255:40,0 chr2 17883096 . C . PASS END=17883176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:55:0,120,1800:0,139,255:40,0 chr2 17884424 . C . PASS END=17884457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:48:0,120,1800:0,130,255:40,0 chr2 17884458 . A . PASS END=17884494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:80:0,120,1800:0,227,255:40,0 chr2 17884495 . C T, 48.73 PASS DP=93;MQ=249.36;MQRankSum=8.245;ReadPosRankSum=5.985;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,41,0:0.441,0.000:93:26,23,0:26,18,0:47:84,0,50,1429,1860,3289:255,0,255:40,0:4.8730e+01,7.9988e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,29,23,18:23,29,17,24 chr2 17884496 . A . PASS END=17884532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:79:0,120,1800:0,217,255:40,0 chr2 17884533 . T . PASS END=17884559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,171,255:40,0 chr2 17888486 . C . PASS END=17888494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 17888495 . G . PASS END=17888646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:81:35:0,81,1215:0,89,255:40,1 chr2 17889906 . T . PASS END=17890020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:55:0,120,1800:0,148,255:40,0 chr2 17894796 . T . PASS END=17894826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:34,0 chr2 17894827 . C . PASS END=17894847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:22:0,66,800:0,66,255:25,0 chr2 17896128 . C . PASS END=17896128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 17896129 . T . PASS END=17896129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 17896130 . G . PASS END=17896332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:33:0,83,1194:0,83,255:40,0 chr2 17897353 . C . PASS END=17897353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr2 17897354 . T . PASS END=17897355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 17897356 . A . PASS END=17897356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 17897357 . A . PASS END=17897450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:87:30:0,87,1181:0,90,255:40,0 chr2 17897451 . C . PASS END=17897487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,183,255:40,0 chr2 17897488 . T C, 50.00 PASS DP=75;MQ=250.00;MQRankSum=7.445;ReadPosRankSum=5.558;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,38,0:0.507,0.000:75:19,26,0:18,12,0:48:85,0,50,1306,1270,2576:255,0,255:31,0:5.0000e+01,6.5233e-05,5.2987e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,24,16,22:23,14,18,20 chr2 17897489 . C . PASS END=17897525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,117,1544:0,117,255:40,0 chr2 17897526 . T . PASS END=17897531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:40,0 chr2 17898008 . T . PASS END=17898009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1407:0,117,255:39,0 chr2 17898010 . A . PASS END=17898010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1269:0,78,255:38,0 chr2 17898011 . A . PASS END=17898124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:39:0,117,1377:0,117,255:40,0 chr2 17898125 . A . PASS END=17898126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,4:71:61:70:0,61,2248:0,61,255:40,5 chr2 17898127 . T . PASS END=17898172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,133,255:40,0 chr2 17898355 . C . PASS END=17898363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:102:0,120,1800:0,255,255:40,0 chr2 17898364 . A . PASS END=17898443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:70:0,120,1800:0,178,255:40,0 chr2 17899344 . C . PASS END=17899344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:49:44:0,49,1197:0,49,255:37,0 chr2 17899345 . T . PASS END=17899490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,129,255:40,0 chr2 17902207 . C . PASS END=17902305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:43:0,113,1551:0,113,255:40,0 chr2 17902409 . C . PASS END=17902418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,153,255:40,0 chr2 17902419 . G . PASS END=17902513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:44:0,84,1260:0,103,255:40,0 chr2 17902514 . T . PASS END=17902514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1380:0,79,255:26,0 chr2 17902515 . A . PASS END=17902516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:42:0,81,1215:0,110,255:27,0 chr2 17902517 . T . PASS END=17902525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:31:0,66,1041:0,66,255:26,0 chr2 17902526 . C . PASS END=17902527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 17902528 . G . PASS END=17902528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr2 17906524 . C . PASS END=17906625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:74:0,120,1800:0,189,255:40,0 chr2 17907656 . T . PASS END=17907736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,151,255:40,0 chr2 17912345 . C . PASS END=17912406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,166,255:40,0 chr2 17913008 . C . PASS END=17913144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:37:0,93,1341:0,93,255:40,0 chr2 17919488 . T . PASS END=17919593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,100,1530:0,100,255:40,0 chr2 17922879 . T . PASS END=17922996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:52:0,117,1800:0,117,255:40,0 chr2 17927094 . C . PASS END=17927213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:55:0,120,1800:0,165,255:40,0 chr2 17941211 . A . PASS END=17941368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1194:0,86,255:40,0 chr2 17941369 . C . PASS END=17941371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 17942663 . G . PASS END=17942737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,120,1800:0,123,255:40,0 chr2 17942738 . A . PASS END=17942774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,185,255:40,0 chr2 17942775 . T A, 49.58 PASS DP=68;MQ=250.00;MQRankSum=7.010;ReadPosRankSum=2.257;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,31,0:0.463,0.000:67:14,13,0:22,18,0:48:84,0,50,1092,1213,2305:255,0,255:33,0:4.9585e+01,6.9634e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,20,11,20:26,10,11,20 chr2 17942776 . C . PASS END=17942812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,136,255:40,0 chr2 17942813 . A . PASS END=17942847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:43:0,90,1350:0,104,255:40,0 chr2 17942848 . A . PASS END=17942849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1168:0,66,255:29,0 chr2 17946164 . T . PASS END=17946205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:39:0,110,1504:0,110,255:40,0 chr2 17946206 . G . PASS END=17946242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:57:0,120,1800:0,142,255:40,0 chr2 17946243 . A G, 48.89 PASS DP=57;MQ=250.00;MQRankSum=6.425;ReadPosRankSum=3.514;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,25,0:0.439,0.000:57:15,18,0:17,7,0:47:84,0,50,894,1058,1952:255,0,255:32,0:4.8889e+01,7.7917e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,17,14,11:18,14,13,12 chr2 17946244 . T . PASS END=17946280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,155,255:40,0 chr2 17946281 . G . PASS END=17946322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1260:0,93,255:40,0 chr2 17946323 . T . PASS END=17946340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,61,255:26,0 chr2 17947846 . G . PASS END=17947848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,114,1352:0,114,255:40,0 chr2 17947849 . C . PASS END=17947885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:47:0,103,1687:0,103,255:40,0 chr2 17947886 . G A, 49.92 PASS DP=66;MQ=249.69;MQRankSum=6.973;ReadPosRankSum=2.572;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,32,0:0.485,0.000:66:18,19,0:16,13,0:48:85,0,50,1116,1187,2303:255,0,255:33,0:4.9919e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,15,14,18:19,15,13,19 chr2 17947887 . T . PASS END=17947923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,153,255:40,0 chr2 17947924 . G . PASS END=17947956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,147,255:40,0 chr2 17950005 . G . PASS END=17950078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:74:0,120,1800:0,196,255:40,0 chr2 17952463 . G . PASS END=17952554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,106,1715:0,106,255:40,0 chr2 17953901 . G . PASS END=17953989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,127,255:40,0 chr2 17953990 . T . PASS END=17954026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,118,1800:0,118,255:40,0 chr2 17954027 . G A, 197.01 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,29,0:0,21,0:147:235,150,0,1877,150,1877:255,150,0:0,0:1.9701e+02,1.4701e+02,0.0000e+00,4.5000e+02,1.8178e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,25:0,0,26,24 chr2 17954028 . T . PASS END=17954051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,99,1565:0,99,255:40,0 chr2 17954055 . A . PASS END=17954055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 17954363 . G . PASS END=17954383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,173,255:40,0 chr2 17954384 . A . PASS END=17954399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:66:0,120,1800:0,187,255:40,0 chr2 17954486 . G . PASS END=17954566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,102,1444:0,109,255:40,0 chr2 17955538 . A . PASS END=17955672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:85:46:0,85,1589:0,85,255:40,1 chr2 17959269 . A . PASS END=17959330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:89:0,120,1800:0,231,255:40,0 chr2 17961245 . A . PASS END=17961388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,110,1710:0,110,255:40,0 chr2 17961885 . C . PASS END=17961885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 17961888 . G . PASS END=17962480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:36:0,88,1333:0,88,255:40,0 chr2 17962481 . T . PASS END=17962517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,115,1800:0,115,255:40,0 chr2 17962518 . C T, 45.30 PASS DP=47;MQ=250.00;MQRankSum=5.701;ReadPosRankSum=5.066;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,18,0:0.383,0.000:47:13,11,0:16,7,0:45:80,0,50,644,1029,1673:255,0,255:28,0:4.5297e+01,1.4988e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,10,10,8:11,18,9,9 chr2 17962519 . A . PASS END=17962555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,120,1800:0,125,255:40,0 chr2 17962556 . G . PASS END=17963107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:81:56:0,81,1800:0,81,255:40,0 chr2 17963108 . T . LowGQ END=17963108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,13:78:0:78:0,0,2011:4,0,255:40,0 chr2 17963109 . C . PASS END=17963118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,5:78:99:73:0,120,1800:0,128,255:40,0 chr2 17963119 . T . PASS END=17963119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,12:78:34:78:0,34,2001:0,34,255:40,0 chr2 17963120 . C . PASS END=17963120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,9:79:73:79:0,73,2108:0,73,255:40,0 chr2 17963121 . A . PASS END=17963206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,106,1800:0,106,255:40,0 chr2 17997786 . A . PASS END=17997786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 17997787 . T . PASS END=17997808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:17,0 chr2 17997809 . C . PASS END=17997809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 17997810 . C . PASS END=17997813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 17997814 . G . PASS END=17997814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 17997815 . C . PASS END=17997848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,637:0,44,255:19,0 chr2 17997849 . G . PASS END=17997850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 17997851 . C . PASS END=17997857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr2 17997858 . T . PASS END=17997867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 17997868 . A . PASS END=17997868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 17997869 . C . PASS END=17997881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 17997882 . G . PASS END=17997882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 17997883 . C . PASS END=17997901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 17997902 . T . PASS END=17997914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 17997915 . T . PASS END=17997925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 17997926 . T . PASS END=17997927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 17997928 . C . PASS END=17997934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 17997935 . T . PASS END=17997936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 17997937 . C . PASS END=17997956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 17997957 . T . PASS END=17997957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 17997958 . C . PASS END=17997959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 17997960 . T . PASS END=17997960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr2 17997961 . C . PASS END=17997963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 17997964 . C . PASS END=17997987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 17997988 . C . PASS END=17998002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr2 17998003 . G . PASS END=17998024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 17998025 . A T, 47.08 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=1.239;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,4,0:0.333,0.000:12:2,0,0:6,4,0:46:82,0,50,114,228,343:97,0,222:7,0:4.7081e+01,1.0691e-04,5.3000e+01,1.1434e+02,2.6323e+02,3.4580e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,3,1:3,5,1,3 chr2 17998026 . G . PASS END=17998032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 17998033 . G . PASS END=17998041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 17998042 . G . PASS END=17998044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 17998045 . C . PASS END=17998045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 17998046 . C . PASS END=17998054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 17998055 . G . PASS END=17998064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 17998065 . G . PASS END=17998065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 17998066 . A . PASS END=17998066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 17998067 . C . PASS END=17998073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,498:0,31,255:13,0 chr2 17998074 . A . PASS END=17998074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 17998075 . T . PASS END=17998076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 17998077 . T . PASS END=17998077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 17998078 . T . PASS END=17998078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 17998079 . A . PASS END=17998079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 17998080 . G . PASS END=17998080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 17998081 . C . PASS END=17998084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 17998085 . C . PASS END=17998085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 17998086 . C . PASS END=17998087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 17998088 . G . PASS END=17998088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 17998089 . C . PASS END=17998090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 17998091 . C . PASS END=17998091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 17998092 . A . PASS END=17998094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 17998095 . C T, 49.79 PASS DP=15;MQ=250.00;MQRankSum=3.183;ReadPosRankSum=0.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:4,1,0:4,6,0:48:85,0,50,222,286,508:204,0,255:7,0:4.9794e+01,6.7304e-05,5.3000e+01,2.2164e+02,3.2087e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,4,3:6,2,4,3 chr2 17998096 . A . PASS END=17998096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 17998097 . C . PASS END=17998101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 17998102 . A . PASS END=17998102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr2 17998103 . G . PASS END=17998132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr2 17998133 . C . PASS END=17998146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,698:0,44,255:19,0 chr2 17998147 . T . PASS END=17998167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr2 17998168 . A . PASS END=17998169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 17998170 . G . PASS END=17998192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,660:0,60,255:24,0 chr2 17998193 . G . PASS END=17998193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 17998194 . A . PASS END=17998200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 17998201 . C . PASS END=17998293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1056:0,87,255:40,0 chr2 17998294 . A . PASS END=17998330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,152,255:40,0 chr2 17998331 . T C, 49.23 PASS DP=53;MQ=249.50;MQRankSum=6.209;ReadPosRankSum=3.851;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,24,0:0.453,0.000:53:16,11,0:13,13,0:48:84,0,50,853,1029,1882:255,0,255:26,0:4.9227e+01,7.3517e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,14,13,11:16,13,10,14 chr2 17998332 . A . PASS END=17998367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:38:0,93,1395:0,114,255:40,0 chr2 18112276 . A . PASS END=18112289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 18112290 . G . PASS END=18112435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,972:0,81,255:40,0 chr2 18112436 . T . PASS END=18112472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,99,1530:0,99,255:40,0 chr2 18112473 . G A, 176.41 PASS DP=44;MQ=250.00;FractionInformativeReads=0.977 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,25,0:0,18,0:126:214,129,0,1640,129,1640:255,129,0:0,0:1.7641e+02,1.2641e+02,0.0000e+00,4.5000e+02,1.6118e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,19:0,0,18,25 chr2 18112474 . T . PASS END=18112510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1252:0,87,255:38,0 chr2 18112511 . T . PASS END=18112724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1260:0,86,255:40,0 chr2 18112725 . T . PASS END=18112725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1113:0,68,255:30,0 chr2 18112726 . C . PASS END=18112728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 18112729 . T . PASS END=18112729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1051:0,66,255:32,0 chr2 18112730 . T . PASS END=18113082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:34:0,85,1063:0,85,255:40,0 chr2 18113083 . T . PASS END=18113083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1200:0,65,255:37,0 chr2 18113084 . T . PASS END=18113256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:33:0,82,1162:0,82,255:40,0 chr2 18113257 . C . PASS END=18113257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 18113258 . T . PASS END=18113264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 18113265 . C . PASS END=18113268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 18113269 . T . PASS END=18113269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:25,0 chr2 18113270 . C . PASS END=18113289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,870:0,62,255:25,0 chr2 18113290 . T . PASS END=18113290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr2 18113291 . C . PASS END=18113294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr2 18113295 . G . PASS END=18113295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr2 18113296 . C . PASS END=18113310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,884:0,69,255:23,0 chr2 18113311 . G . PASS END=18113311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 18113312 . A . PASS END=18113313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 18113314 . A . PASS END=18113314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 18113315 . A . PASS END=18113355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,908:0,61,255:25,0 chr2 18113356 . T . PASS END=18113356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr2 18113357 . G . PASS END=18113371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:23,0 chr2 18113372 . T . PASS END=18113372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:21,0 chr2 18113373 . C . PASS END=18113381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,856:0,72,255:24,0 chr2 18113382 . A . PASS END=18113382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr2 18113383 . A . PASS END=18113390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 18113391 . C . PASS END=18113391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 18113392 . T . PASS END=18113398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr2 18113399 . A . PASS END=18113399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:28,0 chr2 18113400 . C . PASS END=18113456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1113:0,80,255:34,0 chr2 18113457 . C . PASS END=18113457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:34,0 chr2 18113458 . A . PASS END=18113459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 18113460 . C . PASS END=18113460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr2 18113461 . T . PASS END=18113486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1343:0,97,255:37,0 chr2 18113487 . C . PASS END=18113487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:34,0 chr2 18113488 . A . PASS END=18113573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,1125:0,82,255:40,0 chr2 18113574 . T . PASS END=18113574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr2 18113575 . G . PASS END=18113579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 18113580 . A . PASS END=18113580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 18113581 . C . PASS END=18113582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 18113583 . T . PASS END=18113583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 18113584 . T . PASS END=18113585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 18113586 . C . PASS END=18113622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1209:0,86,255:35,0 chr2 18113623 . A G, 154.42 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,16,0:0,20,0:104:192,107,0,292,292,292:255,108,0:0,0:1.5442e+02,1.0442e+02,0.0000e+00,2.8919e+02,3.2396e+02,2.9220e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,17:0,0,19,17 chr2 18113624 . C . PASS END=18113660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:97:35:0,97,1343:0,97,255:39,0 chr2 18113661 . G . PASS END=18113727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1178:0,83,255:40,0 chr2 18113728 . T . PASS END=18113728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr2 18113729 . T . PASS END=18113735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 18113736 . T . PASS END=18113736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 18113737 . T . PASS END=18113739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 18113740 . A . PASS END=18113746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 18113747 . A . PASS END=18113747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,885:0,54,255:23,0 chr2 18113748 . A . PASS END=18113751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:23,0 chr2 18736457 . C . PASS END=18736464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1127:0,90,255:32,0 chr2 18736465 . G . PASS END=18736467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr2 18736468 . G . PASS END=18736639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1156:0,81,255:40,0 chr2 18736640 . G . PASS END=18736640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:38,2 chr2 18736641 . A . PASS END=18736641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1418:0,54,255:39,2 chr2 18736642 . A . PASS END=18737074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:38:0,82,1285:0,82,255:40,0 chr2 18741446 . C . PASS END=18741447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,427:0,39,255:13,0 chr2 18741448 . G . PASS END=18741448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 18741449 . G . PASS END=18741458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 18741459 . T . PASS END=18741459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 18741460 . G . PASS END=18741460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 18741461 . G . PASS END=18741461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 18741462 . C . PASS END=18741464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 18741465 . A . PASS END=18741465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr2 18741466 . A . PASS END=18741466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 18741467 . G . PASS END=18741467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 18741468 . G . PASS END=18741474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 18741475 . C . PASS END=18741475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,368:0,3,255:13,0 chr2 18741476 . C . PASS END=18741476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 18741477 . G . PASS END=18741477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 18741478 . A . PASS END=18741479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 18741480 . C . PASS END=18741480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 18741481 . G . PASS END=18741492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 18741493 . G . PASS END=18741493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 18741494 . G . PASS END=18741496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 18741497 . C . PASS END=18741526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,380:0,30,255:13,0 chr2 18741527 . G . PASS END=18741529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 18741530 . G . PASS END=18741546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr2 18741547 . C . PASS END=18741567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr2 18741568 . G . LowGQ END=18741569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr2 18741570 . T . PASS END=18741570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 18741571 . C . LowGQ END=18741571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:5,0 chr2 18741572 . G . PASS END=18741572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 18741573 . C . LowGQ END=18741576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:5,0 chr2 18741577 . G . PASS END=18741604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr2 18741605 . C . PASS END=18741608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 18741609 . C . PASS END=18741610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 18741611 . G . PASS END=18741614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 18741615 . C . PASS END=18741617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 18741618 . C . PASS END=18741623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 18741624 . A . PASS END=18741627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 18741628 . T . PASS END=18741665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 18741666 . G . PASS END=18741679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:17,0 chr2 18741680 . G . PASS END=18741680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 18741681 . C . PASS END=18741685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 18741686 . C . PASS END=18741686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr2 18741687 . G . PASS END=18741689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr2 18741690 . C . PASS END=18741702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr2 18741703 . C . PASS END=18741703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 18741704 . A . PASS END=18741705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 18741706 . T . PASS END=18741706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 18741707 . C . PASS END=18741708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 18741709 . T . PASS END=18741709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr2 18741710 . C . PASS END=18741713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr2 18741714 . T . PASS END=18741714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr2 18741715 . G . PASS END=18741722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr2 18741723 . C . PASS END=18741723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 18741724 . C . PASS END=18741744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr2 18741745 . G . PASS END=18741745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 18741746 . C . PASS END=18741749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr2 18741750 . T . PASS END=18741750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 18741751 . G . PASS END=18741756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr2 18741757 . T . PASS END=18741757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 18741758 . G . PASS END=18741766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr2 18741767 . G . PASS END=18741768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr2 18741769 . A . PASS END=18741773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 18741774 . C . PASS END=18741774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,680:0,52,255:20,0 chr2 18741775 . G . PASS END=18741775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,668:0,36,255:19,0 chr2 18741776 . G . PASS END=18741779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr2 18741780 . G . PASS END=18741780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,660:0,11,255:20,0 chr2 18741781 . C . PASS END=18741782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 18741783 . A . PASS END=18741783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:19,0 chr2 18741784 . G . PASS END=18741788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 18741789 . A . PASS END=18741789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 18741790 . G . PASS END=18741790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,623:0,33,255:18,0 chr2 18741791 . C . PASS END=18741792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:19,0 chr2 18741793 . C . PASS END=18741793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr2 18741794 . C . PASS END=18741794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 18741795 . C . PASS END=18741795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:17,0 chr2 18741796 . C . PASS END=18741796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 18741797 . G . PASS END=18741797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,593:0,10,255:19,0 chr2 18741798 . C . PASS END=18741800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 18741801 . A . PASS END=18741801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,668:0,11,255:18,0 chr2 18741802 . G . PASS END=18741803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,658:0,46,255:18,0 chr2 18741804 . G . PASS END=18741806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:39:20:0,39,585:0,47,255:13,0 chr2 18741807 . G . PASS END=18741808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr2 18741809 . C . PASS END=18741814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,46,255:13,0 chr2 18741815 . T . LowGQ END=18741815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,457:7,0,255:12,0 chr2 18741816 . G . PASS END=18741816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 18741817 . C . PASS END=18741817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:12,0 chr2 18741818 . C . PASS END=18741823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 18741824 . A . PASS END=18741824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,355:0,6,255:11,0 chr2 18741825 . G . PASS END=18741825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr2 18741826 . T . PASS END=18741826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 18741827 . G . PASS END=18741827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 18741828 . G . PASS END=18741828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 18741829 . C . PASS END=18741830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:11,0 chr2 18741831 . A . PASS END=18741832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 18741833 . T . PASS END=18741833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr2 18741834 . G . PASS END=18741836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 18741837 . A . PASS END=18741837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr2 18741838 . T . PASS END=18741838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 18745062 . C . PASS END=18745067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 18745068 . A . PASS END=18745068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 18745069 . C . PASS END=18745073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr2 18745074 . T . PASS END=18745074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 18745075 . T . PASS END=18745081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 18745082 . T . PASS END=18745082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 18745083 . A . PASS END=18745089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,792:0,66,255:26,0 chr2 18745090 . T . PASS END=18745090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr2 18745091 . A . PASS END=18745093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 18745094 . C . PASS END=18745101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 18745102 . G . PASS END=18745102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 18745103 . A . PASS END=18745111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 18745112 . T . PASS END=18745112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 18745113 . C . PASS END=18745113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 18745114 . T . PASS END=18745114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 18745115 . G . PASS END=18745124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:30,0 chr2 18745125 . A . PASS END=18745130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:31:0,75,1125:0,79,255:26,0 chr2 18745131 . G . PASS END=18745385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,92,255:40,0 chr2 18757450 . C . PASS END=18757624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1133:0,80,255:40,0 chr2 18757625 . G . PASS END=18757626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 18757627 . G . PASS END=18757630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 18757631 . A . PASS END=18757634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 18758039 . C . PASS END=18758041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 18758042 . C . PASS END=18758042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 18758043 . T . PASS END=18758161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:89:31:0,89,1349:0,89,255:40,0 chr2 18764134 . C . PASS END=18764263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:84:37:0,84,1260:0,102,255:40,0 chr2 18765144 . C . PASS END=18765145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 18765146 . A . PASS END=18765150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,910:0,81,255:28,0 chr2 18765151 . A . PASS END=18765151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 18765152 . G . PASS END=18765155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 18765156 . T . PASS END=18765158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 18765159 . G . PASS END=18765166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 18765167 . G . PASS END=18765169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 18765170 . C . PASS END=18765174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 18765175 . C . PASS END=18765175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 18765176 . T . PASS END=18765177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 18765354 . C . PASS END=18765480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,119,1504:0,119,255:40,0 chr2 18765481 . C . PASS END=18765481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1692:0,78,255:38,0 chr2 18765482 . A . PASS END=18765521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1140:0,88,255:40,0 chr2 18765780 . C . PASS END=18765787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr2 18765788 . G . PASS END=18765791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 18765792 . C . PASS END=18765792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 18765793 . G . PASS END=18765802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr2 18765803 . G . PASS END=18765803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 18765804 . G . PASS END=18765816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr2 18765817 . A . PASS END=18765817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 18765818 . A . PASS END=18765823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 18765824 . T . PASS END=18765824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:14,0 chr2 18765825 . C . PASS END=18765841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:16,0 chr2 18765842 . C . PASS END=18765843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 18765844 . G . PASS END=18765845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 18765846 . C . PASS END=18765854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr2 18765855 . G . PASS END=18765951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,535:0,40,255:19,0 chr2 18765952 . T . PASS END=18765952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 18765953 . T . PASS END=18765980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,47,255:19,0 chr2 18765981 . T . PASS END=18765990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 18765991 . T . PASS END=18765991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 18765992 . G . PASS END=18765993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 18765994 . G . PASS END=18766042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,668:0,46,255:19,0 chr2 18766043 . C . PASS END=18766079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,739:0,63,255:24,0 chr2 18766080 . A . PASS END=18766080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 18766081 . G . PASS END=18766098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr2 18766099 . G . PASS END=18766103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 18766104 . A . PASS END=18766108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 18766109 . G . PASS END=18766109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:24,0 chr2 18766110 . C . PASS END=18766115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:26,0 chr2 18766116 . C . PASS END=18766116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 18766117 . A . PASS END=18766137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,919:0,67,255:26,0 chr2 18766138 . G . PASS END=18766138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 18766139 . A . PASS END=18766150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:28,0 chr2 18766151 . G . PASS END=18766151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 18766152 . G . PASS END=18766197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1062:0,84,255:36,0 chr2 18766198 . C . PASS END=18766198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:28,0 chr2 18766199 . T . PASS END=18766204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:29,0 chr2 18766205 . A . PASS END=18766205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 18766206 . G . PASS END=18766207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 18766208 . T . PASS END=18766208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 18766209 . G . PASS END=18766210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 18766211 . A . PASS END=18766213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 18766214 . G . PASS END=18766215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 18766216 . G . PASS END=18766229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,65,255:26,0 chr2 18766230 . G . PASS END=18766230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 18766231 . G . PASS END=18766234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 18766235 . T . PASS END=18766236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 18766237 . C . PASS END=18766237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 18766238 . T . PASS END=18766238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 18766239 . G . PASS END=18766244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 18767514 . C . PASS END=18767657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:39:0,96,1467:0,96,255:40,0 chr2 18768209 . C . PASS END=18768209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 18768210 . C . PASS END=18768210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr2 18768211 . A . PASS END=18768220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 18768221 . T . PASS END=18768221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:29,0 chr2 18768222 . G . PASS END=18768225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr2 18768226 . C . PASS END=18768226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:26,0 chr2 18768227 . C . PASS END=18768240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr2 18768241 . T . PASS END=18768241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 18768242 . A . PASS END=18768242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 18768243 . G . PASS END=18768274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,930:0,62,255:26,0 chr2 18768275 . C . PASS END=18768275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 18768276 . T . PASS END=18768285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 18768286 . G . PASS END=18768299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:18,0 chr2 18768300 . C . PASS END=18768300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 18768301 . A . PASS END=18768312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:18,0 chr2 18768313 . A . PASS END=18768314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 18768315 . A . PASS END=18768317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 18768318 . C . PASS END=18768318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:16,0 chr2 18768319 . G . PASS END=18768323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,660:0,43,255:19,0 chr2 18768324 . G . PASS END=18768329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 18768330 . C . PASS END=18768330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:19,0 chr2 18768331 . A . PASS END=18768344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 18768345 . G . PASS END=18768346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 18768347 . T . PASS END=18768356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr2 18768357 . G . PASS END=18768357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:20,0 chr2 18768358 . C . PASS END=18768367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 18768368 . G . PASS END=18768368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 18768369 . C . PASS END=18768436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,775:0,60,255:24,0 chr2 18768437 . C . PASS END=18768439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 18768769 . C . PASS END=18768836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:36:0,88,1395:0,88,255:40,0 chr2 18768837 . A . PASS END=18768837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:31,0 chr2 18768838 . G . PASS END=18768838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 18768839 . G . PASS END=18768853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:62:26:0,62,914:0,62,255:25,0 chr2 18768854 . T . PASS END=18768854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:23,0 chr2 18768855 . C . PASS END=18768858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 18770705 . C . PASS END=18770734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,2:95:99:90:0,120,1800:0,204,255:40,0 chr2 19552036 . T . PASS END=19552036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 19552037 . T . PASS END=19552037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 19552038 . A . PASS END=19552040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:29,0 chr2 19552041 . A . PASS END=19552041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 19552042 . T . PASS END=19552046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1017:0,87,255:29,0 chr2 19552047 . T . PASS END=19552047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr2 19552048 . C . PASS END=19552048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 19552049 . T . PASS END=19552049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 19552050 . T . PASS END=19552171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1056:0,81,255:40,0 chr2 19552902 . C . PASS END=19552905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 19552906 . G . PASS END=19552907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 19552908 . T . PASS END=19552910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 19552911 . C . PASS END=19552912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 19552913 . C T, 46.31 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=0.551;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,5,0:0.333,0.000:15:7,4,0:3,1,0:45:81,0,50,179,350,528:149,0,255:9,0:4.6312e+01,1.2322e-04,5.3000e+01,1.7873e+02,3.8443e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,4,1:5,5,3,2 chr2 19552914 . A . PASS END=19552919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,598:0,45,255:16,0 chr2 19552920 . T . PASS END=19552920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 19552921 . C . PASS END=19552947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:19,0 chr2 19552948 . T . PASS END=19552950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 19552951 . C . PASS END=19552953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 19552954 . A . PASS END=19552956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,56,255:19,0 chr2 19552957 . T . PASS END=19552986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,792:0,62,255:25,0 chr2 19552987 . C . PASS END=19552987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 19552988 . A . PASS END=19552994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,872:0,75,255:26,0 chr2 19552995 . A . PASS END=19552996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 19552997 . T . PASS END=19552997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 19552998 . A . PASS END=19552998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 19552999 . G . PASS END=19553001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1111:0,79,255:28,0 chr2 19553002 . T . PASS END=19553015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1177:0,80,255:29,0 chr2 19553016 . A . PASS END=19553016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 19553017 . A . PASS END=19553096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1025:0,84,255:33,0 chr2 19553097 . G . PASS END=19553106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr2 19553107 . T . PASS END=19553109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 19553110 . C . PASS END=19553110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 19553111 . G . PASS END=19553111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 19553112 . T . PASS END=19553131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,62,255:26,0 chr2 19553132 . A . PASS END=19553133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 19553134 . C . PASS END=19553134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 19553135 . T . PASS END=19553135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr2 19553136 . G . PASS END=19553137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 19553138 . A . PASS END=19553170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:19,0 chr2 19553171 . G . PASS END=19553186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr2 19553187 . G . PASS END=19553189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 19553190 . G . PASS END=19553192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 19553193 . G . PASS END=19553193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 19553194 . C . PASS END=19553200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,809:0,63,255:23,0 chr2 19553201 . C . PASS END=19553201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 19553202 . A . PASS END=19553233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,839:0,69,255:24,0 chr2 19553234 . G . PASS END=19553237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr2 19553238 . G . PASS END=19553238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:15,0 chr2 19553239 . C . PASS END=19553250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,652:0,54,255:19,0 chr2 19553251 . C . PASS END=19553264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:22,0 chr2 19553265 . T . PASS END=19553265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,743:0,27,255:21,0 chr2 19553266 . C . PASS END=19553281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 19553282 . G . PASS END=19553283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 19553284 . C . PASS END=19553286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 19553287 . G . PASS END=19553288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 19553289 . G . PASS END=19553306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr2 19553307 . G . PASS END=19553309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 19553310 . A . PASS END=19553318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 19553319 . C . PASS END=19553319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 19553320 . G . PASS END=19553332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr2 19553333 . G . PASS END=19553360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:32,0 chr2 19553361 . A . PASS END=19553361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 19553362 . A . PASS END=19553371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1073:0,90,255:31,0 chr2 19553372 . C . PASS END=19553372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 19553373 . G . PASS END=19553442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1127:0,86,255:33,0 chr2 19553443 . A . PASS END=19553443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:31,0 chr2 19553444 . C . PASS END=19553461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:34,0 chr2 19553462 . C . PASS END=19553462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:34,0 chr2 19553463 . G . PASS END=19553550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1188:0,91,255:38,0 chr2 19553551 . A . PASS END=19553551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:30,0 chr2 19553552 . G . PASS END=19553552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 19553553 . G . PASS END=19553553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr2 19553554 . T . PASS END=19553556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 19553557 . T . PASS END=19553557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1146:0,61,255:30,0 chr2 19553558 . G . PASS END=19553565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1170:0,83,255:31,0 chr2 19553566 . T . PASS END=19553566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 20096748 . T . PASS END=20096887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:60:0,120,1800:0,164,255:40,0 chr2 20097630 . C . PASS END=20097796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:34:0,99,1229:0,102,255:40,0 chr2 20100791 . C . PASS END=20100882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,146,255:40,0 chr2 20101467 . C . PASS END=20101476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 20101477 . T . PASS END=20101477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 20101478 . C . PASS END=20101486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr2 20101487 . G A, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.367;ReadPosRankSum=2.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,10,0:0.588,0.000:17:4,2,0:3,8,0:48:85,0,49,341,250,592:255,0,220:6,0:5.0000e+01,7.1705e-05,5.1846e+01,3.4138e+02,2.8512e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,9,1:3,4,3,7 chr2 20101488 . G . PASS END=20101497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr2 20101498 . A . PASS END=20101498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 20101499 . A . PASS END=20101522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,652:0,48,255:19,0 chr2 20101523 . G . PASS END=20101524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 20101525 . A . PASS END=20101525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 20101526 . C . PASS END=20101526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:19,0 chr2 20101527 . A . PASS END=20101545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,720:0,47,255:19,0 chr2 20101546 . A . PASS END=20101548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 20101549 . C . PASS END=20101549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 20101550 . T . PASS END=20101592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 20101593 . C . PASS END=20101615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 20110020 . G . PASS END=20110020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 20110050 . C . PASS END=20110050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr2 20110084 . G . PASS END=20110084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 20110094 . C . PASS END=20110094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 20110329 . C . PASS END=20110330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 20110357 . G . PASS END=20110357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 20110432 . A . PASS END=20110432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 20110522 . C . PASS END=20110522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 20110571 . C . PASS END=20110571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,108,1620:0,129,255:36,0 chr2 20110593 . T . PASS END=20110594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 20110690 . A . PASS END=20110690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 20110699 . C . PASS END=20110701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 20110760 . T . PASS END=20110760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 20110978 . C . PASS END=20110978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 20111031 . G . PASS END=20111031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 20111080 . C . PASS END=20111080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 20111091 . G . PASS END=20111091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,111,1665:0,138,255:37,0 chr2 20111159 . A . PASS END=20111159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 20111282 . T . PASS END=20111282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 20111359 . C . PASS END=20111359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 20111362 . G . PASS END=20111362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 20111385 . T . PASS END=20111385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 20111498 . T . PASS END=20111498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 20111565 . G . PASS END=20111565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 20111651 . T . PASS END=20111651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 20111682 . G . PASS END=20111682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,114,1710:0,125,255:38,0 chr2 20111737 . G . PASS END=20111737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 20111858 . T . PASS END=20111858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 20111906 . G . PASS END=20111906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 20111949 . C . PASS END=20111949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 20112049 . G . PASS END=20112049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20112066 . G . PASS END=20112066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 20112100 . C . PASS END=20112101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:23,0 chr2 20112112 . G . PASS END=20112112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 20112173 . A . PASS END=20112173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 20112257 . C . PASS END=20112257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 20112281 . G . PASS END=20112281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1319:0,105,255:35,0 chr2 20112313 . C . PASS END=20112314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:38:0,87,1305:0,98,255:29,0 chr2 20112322 . A . PASS END=20112322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr2 20112506 . T . PASS END=20112506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 20112524 . G . PASS END=20112524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,166,255:40,0 chr2 20112572 . G . PASS END=20112572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 20112607 . T . PASS END=20112607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr2 20112684 . G . PASS END=20112684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr2 20112756 . A . PASS END=20112756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,223,255:40,0 chr2 20112939 . C . PASS END=20112939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 20113014 . A . PASS END=20113014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 20113022 . T . PASS END=20113022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 20113048 . T . PASS END=20113048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 20113319 . T . PASS END=20113466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:85:33:0,85,1105:0,85,255:40,0 chr2 20113467 . C . PASS END=20113469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:38:0,78,1170:0,114,255:26,0 chr2 20113798 . C . PASS END=20113987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:34:0,81,1215:0,101,255:40,0 chr2 20113988 . A . PASS END=20113988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 20113989 . G . PASS END=20113994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,88,255:27,0 chr2 20113995 . C . PASS END=20114001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,77,255:25,0 chr2 20114002 . G . PASS END=20114038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,615:0,51,255:19,0 chr2 20130157 . C . PASS END=20130157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 20130158 . T . PASS END=20130158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr2 20130159 . G . PASS END=20130180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:30:0,86,1233:0,86,255:40,0 chr2 20130181 . A . PASS END=20130181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1483:0,77,255:40,0 chr2 20130182 . T . PASS END=20130182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 20130183 . C . PASS END=20130313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:37:0,92,1271:0,92,255:40,0 chr2 20130317 . C . PASS END=20130317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 20131020 . G . PASS END=20131020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1511:0,120,255:40,0 chr2 20131030 . C . PASS END=20131041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,127,255:40,0 chr2 20131042 . T . PASS END=20131064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,128,255:40,0 chr2 20131065 . C . PASS END=20131065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:47:50:0,47,1420:0,47,255:40,0 chr2 20131066 . A . PASS END=20131078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,117,1616:0,117,255:40,0 chr2 20131079 . T C, 44.04 PASS DP=57;MQ=250.00;MQRankSum=6.245;ReadPosRankSum=1.001;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,21,0:0.368,0.000:57:20,14,0:16,7,0:44:79,0,50,698,1243,1941:255,0,255:35,0:4.4045e+01,1.9285e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,23,13,8:21,15,12,9 chr2 20131080 . C . PASS END=20131116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,136,255:40,0 chr2 20131117 . G . PASS END=20131146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,114,1710:0,134,255:40,0 chr2 20131147 . T . PASS END=20131170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1305:0,97,255:38,0 chr2 20132044 . C . PASS END=20132208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:40:0,104,1455:0,104,255:40,1 chr2 20133162 . T . PASS END=20133272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:32:0,93,1241:0,96,255:40,0 chr2 20135196 . C . PASS END=20135245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:59:0,120,1800:0,146,255:40,0 chr2 20135246 . G . PASS END=20135282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,165,255:40,0 chr2 20135283 . T C, 47.29 PASS DP=66;MQ=250.00;MQRankSum=6.860;ReadPosRankSum=4.030;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,27,0:0.409,0.000:66:22,7,0:17,20,0:46:82,0,50,937,1242,2178:255,0,255:39,0:4.7293e+01,1.0277e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,24,9,18:20,19,15,12 chr2 20135284 . T . PASS END=20135320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:59:0,120,1800:0,161,255:40,0 chr2 20135321 . G . PASS END=20135351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,99,1485:0,126,255:40,0 chr2 20135352 . T . PASS END=20135364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1035:0,83,255:26,0 chr2 20135980 . C . PASS END=20136126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,104,1369:0,104,255:40,0 chr2 20136137 . A . PASS END=20136137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr2 20137495 . A . PASS END=20137495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 20137504 . C . PASS END=20137657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:38:0,87,1305:0,90,255:40,0 chr2 20137658 . C . PASS END=20137662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,80,255:26,0 chr2 20137663 . G . PASS END=20137676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:19:0,45,675:0,57,255:19,0 chr2 20137677 . T . PASS END=20137686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,48,255:12,0 chr2 20137687 . G . PASS END=20137687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr2 20137688 . C . PASS END=20137694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr2 20137695 . A . PASS END=20137707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr2 20138026 . C . PASS END=20138160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,101,1620:0,101,255:40,0 chr2 20138161 . T . PASS END=20138161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1518:0,63,255:36,0 chr2 20138162 . C . PASS END=20138162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1520:0,110,255:38,0 chr2 20141520 . C . PASS END=20141600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:69:0,120,1800:0,202,255:40,0 chr2 20145547 . C . PASS END=20145734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:93:39:0,93,1395:0,99,255:40,0 chr2 20145735 . A . PASS END=20145752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:24:0,63,945:0,72,255:26,0 chr2 20145753 . G . PASS END=20145757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:17,0 chr2 20146222 . C . PASS END=20146331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:54:0,120,1800:0,163,255:40,0 chr2 20147925 . C . PASS END=20147978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,186,255:40,0 chr2 20151175 . C . PASS END=20151245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:78:0,120,1800:0,218,255:40,0 chr2 20153592 . T . PASS END=20153592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr2 20153595 . C . PASS END=20153729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:34:0,93,1137:0,97,255:40,0 chr2 20153730 . A . PASS END=20153739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:34:0,75,1125:0,78,255:26,0 chr2 20160314 . C . PASS END=20160375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:74:0,120,1800:0,209,255:40,0 chr2 20162056 . C . PASS END=20162088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,174,255:40,0 chr2 20166485 . C . PASS END=20166670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:95:37:0,95,1303:0,95,255:40,0 chr2 20169241 . C . PASS END=20169366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,120,1800:0,147,255:40,0 chr2 20173324 . C . PASS END=20173333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr2 20173334 . G . PASS END=20173334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 20173335 . G . PASS END=20173341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 20173342 . A . PASS END=20173342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 20173343 . A . PASS END=20173351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr2 20173352 . A . PASS END=20173352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 20173353 . T . PASS END=20173361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,862:0,64,255:26,0 chr2 20173362 . C . PASS END=20173364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 20173365 . T . PASS END=20173367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 20173368 . C . PASS END=20173368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr2 20173369 . C . PASS END=20173431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,67,255:26,0 chr2 20173432 . G . PASS END=20173438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:18,0 chr2 20173439 . A . PASS END=20173451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 20173452 . T . PASS END=20173454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 20173455 . C . PASS END=20173455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 20173456 . A . PASS END=20173456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 20173457 . A . PASS END=20173457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:14,0 chr2 20173458 . T . PASS END=20173462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,621:0,41,255:17,0 chr2 20173463 . A . PASS END=20173463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:15,0 chr2 20173464 . C . PASS END=20173469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,613:0,51,255:17,0 chr2 20174229 . T . PASS END=20174236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,834:0,61,255:26,0 chr2 20174237 . T . PASS END=20174237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:24,0 chr2 20174238 . T . PASS END=20174239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 20174240 . T . PASS END=20174240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 20174241 . C . PASS END=20174241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr2 20174242 . A . PASS END=20174243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 20174244 . G . PASS END=20174244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 20174245 . T . PASS END=20174246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 20174247 . T . PASS END=20174247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 20174248 . C . PASS END=20174248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 20174249 . A . PASS END=20174249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 20174250 . T . PASS END=20174251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1012:0,90,255:30,0 chr2 20174252 . A . PASS END=20174252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:29,0 chr2 20174253 . T . PASS END=20174255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1064:0,90,255:30,0 chr2 20174256 . G . PASS END=20174256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 20174257 . G . PASS END=20174267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1188:0,90,255:32,0 chr2 20174268 . T . PASS END=20174268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1154:0,69,255:31,0 chr2 20174269 . A . PASS END=20174271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:32,0 chr2 20174272 . A . PASS END=20174272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr2 20174273 . A . PASS END=20174327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1156:0,81,255:40,0 chr2 20174328 . A . PASS END=20174328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1692:0,75,255:40,0 chr2 20174329 . C . PASS END=20174394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1151:0,83,255:40,0 chr2 20175291 . C . PASS END=20175418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:44:0,111,1665:0,116,255:40,0 chr2 20175419 . G . PASS END=20175419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:37,0 chr2 20175420 . A . PASS END=20175424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1485:0,113,255:37,0 chr2 20175437 . A . PASS END=20175437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 20177391 . G . PASS END=20177391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,203,255:40,0 chr2 20178508 . T . PASS END=20178508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 20178512 . C . PASS END=20178640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1288:0,92,255:40,0 chr2 20180452 . C . PASS END=20180544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:63:0,120,1800:0,182,255:40,0 chr2 20180548 . G . PASS END=20180548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,163,255:40,0 chr2 20182224 . C . PASS END=20182295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,99,1493:0,99,255:40,0 chr2 20182299 . A . PASS END=20182299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr2 20182313 . A . PASS END=20182313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 20188926 . C . PASS END=20188977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,134,255:40,0 chr2 20188978 . T . PASS END=20189010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:45:0,84,1260:0,125,255:40,0 chr2 20189011 . A . PASS END=20189014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:75:36:0,75,1125:0,92,255:26,0 chr2 20189015 . T C, 50.00 PASS DP=35;MQ=250.00;MQRankSum=4.820;ReadPosRankSum=0.177;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,21,0:0.618,0.000:34:8,9,0:5,12,0:46:85,0,46,751,465,1216:255,0,255:9,0:5.0000e+01,9.9662e-05,4.8876e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,12,9:5,8,12,9 chr2 20189016 . G . PASS END=20189043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:24:0,64,886:0,64,255:24,0 chr2 20189045 . T . PASS END=20189045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 20189749 . T . PASS END=20189749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 20189753 . T . PASS END=20189761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 20189762 . C . PASS END=20189776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:25,0 chr2 20191828 . T . PASS END=20191828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 20191876 . T . PASS END=20191876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 20191883 . G . PASS END=20191883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 20191917 . C . PASS END=20191917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 20192123 . A . PASS END=20192123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 20192212 . C . PASS END=20192212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 20192560 . A . PASS END=20192560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 20192661 . T . PASS END=20192661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 20192720 . T . PASS END=20192720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 20192798 . C . PASS END=20192798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:85:0,120,1800:0,239,255:40,0 chr2 20192828 . G . PASS END=20192828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:103:0,120,1800:0,255,255:40,0 chr2 20192872 . T . PASS END=20192927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:99:0,120,1800:0,255,255:40,0 chr2 20192935 . G . PASS END=20192935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr2 20194060 . G . PASS END=20194073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,123,255:40,0 chr2 20194074 . C . PASS END=20194170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,111,1756:0,111,255:40,0 chr2 20196895 . C . PASS END=20197020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:33:0,88,1150:0,88,255:40,0 chr2 20200202 . C . PASS END=20200327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:33:0,84,1260:0,99,255:40,0 chr2 20201716 . C . PASS END=20201841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:49:0,120,1800:0,127,255:40,0 chr2 20202922 . C . PASS END=20202930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1136:0,99,255:33,0 chr2 20202931 . T . PASS END=20202931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr2 20202932 . T . PASS END=20203014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1175:0,87,255:36,0 chr2 20203015 . A . PASS END=20203015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 20203016 . C . PASS END=20203017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 20203018 . G . PASS END=20203037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr2 20203038 . G . PASS END=20203047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,56,255:19,0 chr2 20205505 . C . PASS END=20205509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 20205510 . A . PASS END=20205523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:24,0 chr2 20205524 . T . PASS END=20205524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,772:0,39,255:22,0 chr2 20205525 . C . PASS END=20205532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 20205533 . A . PASS END=20205533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 20205534 . A . PASS END=20205539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,858:0,72,255:25,0 chr2 20205540 . T . PASS END=20205540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 20205541 . C . PASS END=20205546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr2 20205547 . C . PASS END=20205596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,912:0,84,255:30,0 chr2 20205597 . A . PASS END=20205599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr2 20205600 . A . PASS END=20205601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20205602 . C . PASS END=20205610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr2 20205611 . C . PASS END=20205621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 20205622 . C . PASS END=20205625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 20205626 . G . PASS END=20205638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:30,0 chr2 20205639 . G . PASS END=20205642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 20205643 . A . PASS END=20205648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:28,0 chr2 20205649 . C . PASS END=20205655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:25,0 chr2 20205656 . A . PASS END=20205656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:23,0 chr2 20205657 . G . PASS END=20205679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,970:0,78,255:26,0 chr2 20205680 . C T, 45.37 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=2.746;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,9,0:0.360,0.000:25:7,3,0:9,6,0:45:80,0,50,293,556,849:252,0,255:14,0:4.5365e+01,1.4807e-04,5.3000e+01,2.9305e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,3,6:12,4,5,4 chr2 20205681 . T . PASS END=20205689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 20205690 . T . PASS END=20205691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 20205692 . G . PASS END=20205693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:23,0 chr2 20205694 . C . PASS END=20205694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr2 20205695 . C . PASS END=20205717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,914:0,65,255:24,0 chr2 20205718 . T . PASS END=20205719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 20205720 . A . PASS END=20205720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 20205721 . T . PASS END=20205732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:23,0 chr2 20205733 . G . PASS END=20205733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr2 20205734 . G . PASS END=20205748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 20205749 . C . PASS END=20205750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,709:0,52,255:20,0 chr2 20205751 . C . PASS END=20205774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:26,0 chr2 20205775 . A . PASS END=20205775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:22,0 chr2 20205776 . G . PASS END=20205808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 20205809 . T . PASS END=20205810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 20205811 . A . PASS END=20205815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr2 20205816 . G . PASS END=20205817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 20205818 . G . PASS END=20205847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 20205848 . G A, 49.73 PASS DP=26;MQ=249.55;MQRankSum=4.295;ReadPosRankSum=3.009;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:8,6,0:6,6,0:48:85,0,50,429,472,901:255,0,255:12,0:4.9726e+01,6.8081e-05,5.3000e+01,4.2899e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,11,1:7,7,7,5 chr2 20205849 . G . PASS END=20205865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 20205866 . C . PASS END=20205876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr2 20205877 . A . PASS END=20205877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 20205878 . G . PASS END=20205885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr2 20205886 . G . PASS END=20205894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1140:0,93,255:31,0 chr2 20205895 . C . PASS END=20205895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 20205896 . G . PASS END=20205897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 20205898 . T . PASS END=20205898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 20205899 . C . PASS END=20205904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1127:0,96,255:32,0 chr2 20205905 . A . PASS END=20205905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 20205906 . G . PASS END=20205915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,85,255:28,0 chr2 20205916 . A . PASS END=20205916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 20205917 . G . PASS END=20206002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:32:0,83,1139:0,83,255:40,0 chr2 20206003 . C . PASS END=20206003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1191:0,59,255:35,0 chr2 20206004 . C . PASS END=20206034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1143:0,81,255:40,0 chr2 20206035 . A . PASS END=20206035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:32,0 chr2 20206036 . T . PASS END=20206043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1197:0,88,255:33,0 chr2 20206044 . A . PASS END=20206051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:31:0,63,945:0,66,255:22,0 chr2 20206052 . G . PASS END=20206052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:20,0 chr2 20206053 . G . PASS END=20206054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:31:0,62,945:0,62,255:21,0 chr2 20206055 . T . PASS END=20206055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,900:0,37,255:21,0 chr2 20206056 . C . PASS END=20206057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:23,0 chr2 20206058 . G . PASS END=20206058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:20,0 chr2 20206059 . C . PASS END=20206065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 20206066 . A . PASS END=20206067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr2 20206068 . A . PASS END=20206070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 20206071 . C . PASS END=20206071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 20212162 . G . PASS END=20212162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr2 20212170 . C . PASS END=20212221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr2 20212222 . G . PASS END=20212224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 20212225 . A . PASS END=20212225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 20212226 . G . PASS END=20212230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 20212231 . A . PASS END=20212231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 20212232 . G . PASS END=20212240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr2 20212241 . C . PASS END=20212241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr2 20212242 . G . PASS END=20212244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 20212245 . G . PASS END=20212370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:13,0 chr2 20212371 . G . PASS END=20212392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 20232966 . T . PASS END=20233040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,133,255:40,0 chr2 20234078 . C . PASS END=20234176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,111,1800:0,111,255:40,0 chr2 20234728 . C . PASS END=20234823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:89:0,120,1800:0,231,255:40,0 chr2 20237077 . T . PASS END=20237199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:44:0,118,1544:0,118,255:40,0 chr2 20237299 . A . PASS END=20237375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:87:0,120,1800:0,248,255:40,0 chr2 20240652 . C . PASS END=20240772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,116,1669:0,116,255:40,0 chr2 20251171 . C . PASS END=20251213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr2 20251214 . C . PASS END=20251217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 20251218 . A . PASS END=20251234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 20251235 . C . PASS END=20251235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 20251236 . T . PASS END=20251243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr2 20251244 . C . PASS END=20251245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 20251246 . G . PASS END=20251246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 20251247 . T . PASS END=20251248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 20251249 . A . PASS END=20251250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 20251251 . T . PASS END=20251262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 20251263 . T . PASS END=20251264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 20251265 . A . PASS END=20251265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 20251266 . A . PASS END=20251278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:18,0 chr2 20251279 . C . PASS END=20251279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 20251280 . A . PASS END=20251281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 20402031 . C . PASS END=20402032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 20402033 . A . PASS END=20402042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 20402043 . T . PASS END=20402043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 20402044 . C . PASS END=20402048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 20402049 . C . PASS END=20402049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 20402050 . G . PASS END=20402050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:24,0 chr2 20402051 . A . PASS END=20402062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:25,0 chr2 20402527 . T . PASS END=20402527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 20402528 . C . PASS END=20402528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 20402529 . A . PASS END=20402529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,681:0,8,255:18,0 chr2 20402530 . G . PASS END=20402548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,807:0,63,255:23,0 chr2 20402549 . T . PASS END=20402549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:20,0 chr2 20402550 . T . PASS END=20402559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,978:0,69,255:26,0 chr2 20402560 . C . PASS END=20402581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1013:0,81,255:29,0 chr2 20402582 . T . PASS END=20402582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 20402583 . G . PASS END=20402593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 20402594 . T . PASS END=20402594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 20402595 . C . PASS END=20402609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:30,0 chr2 20402610 . C . PASS END=20402610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 20402611 . T . PASS END=20402612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 20402613 . C . PASS END=20402613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:28,0 chr2 20402614 . G . PASS END=20402621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1125:0,90,255:30,0 chr2 20402622 . T . PASS END=20402622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr2 20402623 . C . PASS END=20402624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 20402625 . T . PASS END=20402681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 20402682 . C . PASS END=20402696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,660:0,43,255:19,0 chr2 20402848 . C . PASS END=20402848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 20402849 . T . PASS END=20402849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 20402850 . C . PASS END=20402861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 20402862 . T . PASS END=20402863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 20402864 . C . PASS END=20402878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 20402879 . C . PASS END=20402879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:22,0 chr2 20402880 . T . PASS END=20402901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,892:0,69,255:24,0 chr2 20402902 . G . PASS END=20402902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:22,0 chr2 20402903 . A . PASS END=20402908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr2 20402909 . T . PASS END=20402909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 20402910 . G . PASS END=20402915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 20402916 . T . PASS END=20402917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 20402918 . G . PASS END=20402920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 20402921 . C . PASS END=20402938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,56,255:19,0 chr2 20402939 . G . PASS END=20402943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 20402944 . C . PASS END=20402945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 20402946 . A . PASS END=20402956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:10,0 chr2 20402957 . C . PASS END=20402979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 20402980 . A . PASS END=20402983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 20403574 . C . PASS END=20403589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,906:0,72,255:26,0 chr2 20403590 . T . PASS END=20403590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:25,0 chr2 20403591 . C . PASS END=20403591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 20403592 . T . PASS END=20403593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20403594 . C . PASS END=20403594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 20403595 . T . PASS END=20403598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 20403599 . G . PASS END=20403599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 20403600 . G . PASS END=20403600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 20403601 . G . PASS END=20403601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 20403602 . A . PASS END=20403608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1133:0,90,255:31,0 chr2 20403609 . T . PASS END=20403609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 20403610 . G . PASS END=20403610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr2 20403611 . G . PASS END=20403611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 20403612 . A . PASS END=20403614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1135:0,60,255:28,0 chr2 20403615 . C . PASS END=20403647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 20403648 . G . PASS END=20403661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,1102:0,63,255:26,0 chr2 20403662 . G . PASS END=20403666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 20403667 . G . PASS END=20403667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 20403668 . G . PASS END=20403669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 20403670 . A . PASS END=20403675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 20403676 . A . PASS END=20403676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 20403677 . A . PASS END=20403677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:26,0 chr2 20403678 . G . PASS END=20403680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 20403681 . C . PASS END=20403681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 20403682 . A . PASS END=20403684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 20403685 . T . PASS END=20403685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 20403686 . T . PASS END=20403686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20403687 . G . PASS END=20403728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,914:0,62,255:26,0 chr2 20403729 . G . PASS END=20403731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:28,0 chr2 20403732 . T . PASS END=20403732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 20403733 . G . PASS END=20403739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 20403740 . T . PASS END=20403740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 20403741 . G . PASS END=20403742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 20403743 . G . PASS END=20403753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,978:0,67,255:26,0 chr2 20403754 . G . PASS END=20403755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20403756 . C . PASS END=20403756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 20403757 . G . PASS END=20403793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,854:0,61,255:26,0 chr2 20403794 . A T, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,12,0:0,12,0:69:157,72,0,923,72,923:255,72,0:0,0:1.1923e+02,6.9230e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,16:0,0,12,12 chr2 20403795 . G . PASS END=20403795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 20403796 . A . PASS END=20403796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 20403797 . T . PASS END=20403830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,65,255:23,0 chr2 20403831 . G . PASS END=20403831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr2 20403832 . G . PASS END=20403841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr2 20403842 . T . PASS END=20403842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 20403843 . C . PASS END=20403851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr2 20403852 . G . PASS END=20403859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 20403860 . A . PASS END=20403888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:20:0,45,675:0,50,255:19,0 chr2 20403889 . A G, 47.38 PASS DP=23;MQ=250.00;MQRankSum=3.937;ReadPosRankSum=0.850;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,9,0:0.391,0.000:23:7,3,0:7,6,0:46:82,0,50,293,501,793:255,0,255:9,0:4.7380e+01,1.0122e-04,5.3000e+01,2.9258e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,4,5:12,2,2,7 chr2 20403890 . G . PASS END=20403901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,46,255:16,0 chr2 20403902 . T . PASS END=20403902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 20403903 . T . PASS END=20403909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr2 20403910 . C . PASS END=20403911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 20403912 . C . PASS END=20403925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,584:0,51,255:19,0 chr2 20403926 . G . PASS END=20403926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr2 20403927 . T . PASS END=20403932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,774:0,50,255:19,0 chr2 20403933 . T . PASS END=20403938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 20403939 . C . PASS END=20403939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 20403940 . A . PASS END=20403948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:22,0 chr2 20403949 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=3.148;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:5,9,0:6,5,0:48:85,0,49,493,361,853:255,0,255:10,0:5.0000e+01,7.0152e-05,5.2097e+01,4.5000e+02,3.9537e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,2,5,9:5,6,6,8 chr2 20403950 . T . PASS END=20403973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,856:0,65,255:25,0 chr2 20403974 . G . PASS END=20403974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,933:0,50,255:25,0 chr2 20403975 . T . PASS END=20403978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,986:0,67,255:26,0 chr2 20403979 . A . PASS END=20403984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:27,0 chr2 20403985 . C . PASS END=20403985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 20403986 . G . PASS END=20403986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 20403987 . T . PASS END=20403987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 20403988 . C . PASS END=20403993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr2 20403994 . C . PASS END=20403994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:25,0 chr2 20403995 . T . PASS END=20403996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20403997 . C . PASS END=20403997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:25,0 chr2 20403998 . G . PASS END=20403998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20403999 . T . PASS END=20403999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 20404000 . G . PASS END=20404007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr2 20404008 . A . PASS END=20404019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,789:0,64,255:26,0 chr2 20404020 . T . PASS END=20404020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:22,0 chr2 20404021 . C . PASS END=20404026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:24,0 chr2 20404027 . T . PASS END=20404027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:22,0 chr2 20404028 . G . PASS END=20404031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 20404032 . A . PASS END=20404032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,770:0,33,255:21,0 chr2 20404033 . G . PASS END=20404035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 20404036 . G . PASS END=20404036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:21,0 chr2 20404037 . A . PASS END=20404037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 20404038 . T . PASS END=20404038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,759:0,25,255:21,0 chr2 20404039 . A . PASS END=20404041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,778:0,53,255:20,0 chr2 20404042 . T . PASS END=20404043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 20404044 . G . PASS END=20404045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 20404046 . A . PASS END=20404047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 20404048 . A . PASS END=20404050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr2 20404051 . A . PASS END=20404052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 20405104 . C . PASS END=20405185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,129,255:40,0 chr2 20407140 . C . PASS END=20407190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,108,1426:0,111,255:40,0 chr2 20407688 . T . PASS END=20407707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,385:0,33,255:13,0 chr2 20407708 . C . PASS END=20407721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:18,0 chr2 20407722 . G . PASS END=20407803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,63,255:26,0 chr2 20407804 . A . PASS END=20407820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:16,0 chr2 20407821 . T . PASS END=20407825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 20423018 . C . PASS END=20423039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,139,255:40,0 chr2 20423952 . C . PASS END=20423960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 20423961 . C . PASS END=20423964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 20423965 . C . PASS END=20423965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 20423966 . G . PASS END=20423979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 20423980 . C . PASS END=20423989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 20423990 . G . PASS END=20423990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr2 20423991 . C . PASS END=20424001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr2 20424002 . C . PASS END=20424006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 20424007 . A . PASS END=20424007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 20424008 . C . PASS END=20424008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 20424009 . G . PASS END=20424020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:10:0,12,180:0,30,255:4,0 chr2 20424021 . C . PASS END=20424024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,164:3,0 chr2 20424025 . T . PASS END=20424041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,72:0,9,72:3,0 chr2 20424563 . C . PASS END=20424581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr2 20424582 . C . PASS END=20424598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 20424599 . C . PASS END=20424628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:5:0,15,194:0,15,194:6,0 chr2 20451346 . T . PASS END=20451477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:90:38:0,90,1350:0,101,255:40,0 chr2 20453583 . C . PASS END=20453729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:39:0,97,1409:0,97,255:40,0 chr2 20453730 . T . PASS END=20453730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1397:0,71,255:39,0 chr2 20453731 . C . PASS END=20453761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1188:0,84,255:40,0 chr2 20453762 . T . PASS END=20453775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:26:0,68,919:0,68,255:26,0 chr2 20454624 . C . PASS END=20454745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:38:0,96,1440:0,101,255:40,0 chr2 20454977 . C . PASS END=20455102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,114,1710:0,131,255:40,0 chr2 20455794 . T . PASS END=20455930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:33:0,85,1160:0,85,255:40,0 chr2 20455931 . T . PASS END=20455931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 20457998 . A . PASS END=20458132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,110,1490:0,110,255:40,0 chr2 20460098 . C . PASS END=20460227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:63:0,120,1800:0,143,255:40,0 chr2 20462954 . C . PASS END=20463177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:31:0,82,1095:0,82,255:40,0 chr2 20463178 . A . PASS END=20463178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 20463179 . G . PASS END=20463182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 20463183 . C . PASS END=20463186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:30:0,66,990:0,74,255:26,0 chr2 20463187 . A . PASS END=20463201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:18:0,45,675:0,54,255:18,0 chr2 20463202 . A . PASS END=20463213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr2 20463214 . C . PASS END=20463221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 20477968 . C . PASS END=20478062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,191,255:40,0 chr2 20478172 . T . PASS END=20478218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,146,255:40,0 chr2 20478344 . C . PASS END=20478374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,101,1351:0,101,255:40,0 chr2 20478375 . T . PASS END=20478554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:33:0,86,1194:0,86,255:40,0 chr2 20478555 . G . PASS END=20478555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:29,0 chr2 20478556 . G . PASS END=20478567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,83,255:31,0 chr2 20478568 . G . PASS END=20478580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,77,255:26,0 chr2 20482708 . C . PASS END=20482724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,862:0,62,255:27,0 chr2 20482725 . C . PASS END=20482745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1033:0,84,255:40,0 chr2 20482746 . G . PASS END=20482746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:40,0 chr2 20482747 . C . PASS END=20482755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:43:0,88,1458:0,88,255:40,0 chr2 20482756 . A . PASS END=20482756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1511:0,69,255:40,0 chr2 20482757 . G . PASS END=20482779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,108,1649:0,108,255:40,0 chr2 20482780 . A . PASS END=20482780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1480:0,78,255:40,0 chr2 20482781 . T . PASS END=20482975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:34:0,86,1233:0,86,255:40,0 chr2 20482976 . A . PASS END=20482976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1216:0,50,255:27,2 chr2 20482977 . G . PASS END=20482978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:36:35:0,36,1188:0,36,255:28,2 chr2 20482979 . T . PASS END=20482979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:16:34:0,16,1015:0,16,255:27,2 chr2 20482980 . G . PASS END=20482980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr2 20482981 . C . PASS END=20482990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:30,0 chr2 20482991 . T . PASS END=20482991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 20482992 . G . PASS END=20482992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 20483104 . C . PASS END=20483114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 20483115 . G . PASS END=20483115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 20483116 . C . PASS END=20483124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1096:0,90,255:30,0 chr2 20483125 . T . PASS END=20483125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 20483126 . A . PASS END=20483213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1233:0,85,255:39,0 chr2 20483214 . T . PASS END=20483232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,992:0,68,255:25,0 chr2 20483233 . C . PASS END=20483247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:18:0,51,765:0,54,255:18,0 chr2 20490413 . C . PASS END=20490435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1111:0,90,255:38,0 chr2 20490436 . T . PASS END=20490436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:37,0 chr2 20490437 . G . PASS END=20490526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,88,255:40,0 chr2 20490527 . G . PASS END=20490543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:24:0,60,900:0,68,255:23,0 chr2 20490544 . C . PASS END=20490551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,49,255:19,0 chr2 20494137 . C . PASS END=20494154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1217:0,90,255:36,0 chr2 20494155 . A . PASS END=20494155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr2 20494156 . G . PASS END=20494261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,87,255:40,0 chr2 20494262 . G . PASS END=20494275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,62,255:26,0 chr2 20494276 . G . PASS END=20494279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr2 20497314 . C . PASS END=20497332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,621:0,51,255:19,0 chr2 20497333 . A . PASS END=20497342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:21,0 chr2 20497343 . G . PASS END=20497343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 20497344 . C . PASS END=20497348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,747:0,63,255:26,0 chr2 20497349 . G . PASS END=20497413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:31:0,85,1158:0,85,255:40,0 chr2 20497414 . A . PASS END=20497414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:35,0 chr2 20497415 . G . PASS END=20497426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1410:0,98,255:36,0 chr2 20497427 . G . PASS END=20497439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:27:0,72,1080:0,81,255:26,0 chr2 20507739 . C . PASS END=20507832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:33:0,96,1258:0,99,255:40,0 chr2 20508075 . C . PASS END=20508099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1227:0,88,255:35,0 chr2 20508100 . A . PASS END=20508100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1181:0,69,255:33,0 chr2 20508101 . G . PASS END=20508265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1310:0,92,255:40,0 chr2 20508266 . G . PASS END=20508266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:31,0 chr2 20508267 . T . PASS END=20508267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr2 20508268 . C . PASS END=20508268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:28,0 chr2 20508269 . C . PASS END=20508270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:28,0 chr2 20508271 . T . PASS END=20508272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1201:0,64,255:28,0 chr2 20508273 . T . PASS END=20508273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 20508274 . G . PASS END=20508277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr2 20508278 . G . PASS END=20508278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr2 20508279 . A . PASS END=20508279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 20508280 . T . PASS END=20508281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr2 20508282 . A . PASS END=20508283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 20508284 . T . PASS END=20508284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1064:0,57,255:27,0 chr2 20508285 . A . PASS END=20508285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 20508286 . T . PASS END=20508286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:27,0 chr2 20508287 . T . PASS END=20508304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr2 20508305 . C . PASS END=20508307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,61,255:19,0 chr2 20508308 . C . PASS END=20508310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 20508311 . C . PASS END=20508313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:56:23:0,56,853:0,56,255:19,0 chr2 20508314 . T . PASS END=20508317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr2 20508318 . A . PASS END=20508322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 20508323 . C . PASS END=20508335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr2 20508336 . A . PASS END=20508345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:17,0 chr2 20511255 . T . PASS END=20511424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,104,1415:0,104,255:40,0 chr2 20511997 . A . PASS END=20511999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr2 20512000 . A . PASS END=20512001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 20512002 . T . PASS END=20512170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1056:0,84,255:40,0 chr2 20512171 . G . PASS END=20512184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr2 20518298 . G . PASS END=20518406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,120,1800:0,125,255:40,0 chr2 20526090 . C . PASS END=20526111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1102:0,87,255:30,0 chr2 20526112 . T . PASS END=20526112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr2 20526113 . G . PASS END=20526146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,989:0,80,255:30,0 chr2 20527071 . C . PASS END=20527121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,190,255:40,0 chr2 20647227 . A . PASS END=20647228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 20647229 . G . PASS END=20647229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr2 20647230 . G . PASS END=20647231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 20647232 . G . PASS END=20647232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 20647233 . G . PASS END=20647237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 20647238 . C . PASS END=20647238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 20647239 . C . PASS END=20647251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,720:0,66,255:25,0 chr2 20647252 . T . PASS END=20647252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 20647253 . G . PASS END=20647268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,917:0,75,255:26,0 chr2 20647269 . G . PASS END=20647275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:30,0 chr2 20647276 . G . PASS END=20647276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 20647277 . C . PASS END=20647292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:33,0 chr2 20647293 . A . PASS END=20647293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr2 20647294 . T . PASS END=20647352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,881:0,81,255:31,0 chr2 20647353 . G . PASS END=20647383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:26,0 chr2 20647384 . T . PASS END=20647397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr2 20647398 . T . PASS END=20647418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 20647419 . G . PASS END=20647425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 20647426 . A . PASS END=20647429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,48,255:13,0 chr2 20647430 . C . PASS END=20647430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 20647431 . C . PASS END=20647459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr2 20647460 . C . PASS END=20647460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 20647461 . G . PASS END=20647466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 20647467 . C . PASS END=20647467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 20647468 . T . PASS END=20647468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 20647469 . C . PASS END=20647489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:19,0 chr2 20647490 . C . PASS END=20647490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,0 chr2 20647491 . C . PASS END=20647493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 20647494 . G . PASS END=20647495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 20647496 . C . PASS END=20647497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 20647498 . C . PASS END=20647500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr2 20647501 . T . PASS END=20647501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 20647502 . G . PASS END=20647533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:24,0 chr2 20647534 . T . PASS END=20647537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 20647538 . G . PASS END=20647551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:20,0 chr2 20647552 . A . PASS END=20647612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,613:0,40,255:19,0 chr2 20647613 . A . PASS END=20647613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:12,0 chr2 20647614 . G . PASS END=20647623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,698:0,54,255:18,0 chr2 20647624 . G . PASS END=20647624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr2 20647625 . C . PASS END=20647628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,631:0,54,255:18,0 chr2 20647629 . A . PASS END=20647630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 20647631 . G . PASS END=20647687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,629:0,51,255:19,0 chr2 20647688 . C . PASS END=20647692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 20647693 . A . PASS END=20647713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,623:0,44,255:19,0 chr2 20647714 . C . PASS END=20647719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr2 20647720 . A . PASS END=20647720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 20647721 . A . PASS END=20647729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr2 20647730 . C . PASS END=20647730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 20647731 . G . PASS END=20647740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:22,0 chr2 20647741 . A . PASS END=20647741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 20647742 . G . PASS END=20647742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 20647743 . A . PASS END=20647743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,646:0,36,255:20,0 chr2 20647744 . C . PASS END=20647747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 20647748 . C . PASS END=20647748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr2 20647749 . A . PASS END=20647750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 20647751 . G . PASS END=20647754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,820:0,53,255:21,0 chr2 20647755 . G . PASS END=20647755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr2 20647756 . C . PASS END=20647757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 20647758 . G . PASS END=20647776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr2 20647777 . G . PASS END=20647805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,568:0,40,255:19,0 chr2 20647806 . A . PASS END=20647812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:16:0,39,585:0,41,255:13,0 chr2 20647813 . T . PASS END=20647817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 20678506 . C . PASS END=20678506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20678507 . T . PASS END=20678507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:27,0 chr2 20678508 . A . PASS END=20678514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:32,0 chr2 20678515 . T . PASS END=20678515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:32,0 chr2 20678516 . C . PASS END=20678569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:35:0,98,1380:0,98,255:40,1 chr2 20678570 . G A, 49.40 PASS DP=60;MQ=249.98;MQRankSum=6.122;ReadPosRankSum=2.704;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,27,0:0.450,0.000:60:13,11,0:20,16,0:47:84,0,47,184,184,184:255,0,255:31,0:4.9399e+01,9.3190e-05,5.0000e+01,1.8417e+02,2.1894e+02,1.8718e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,14,22,5:17,16,12,15 chr2 20678571 . G . PASS END=20678607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:60:0,120,1800:0,129,255:40,0 chr2 20678608 . C . PASS END=20678712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,99,1485:0,111,255:40,0 chr2 20678713 . C . PASS END=20678715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 20678716 . T . PASS END=20678716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr2 20679775 . C . PASS END=20679779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr2 20679780 . C . PASS END=20679807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:26,0 chr2 20679808 . A . PASS END=20679809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 20679810 . G . PASS END=20679810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 20679811 . C . PASS END=20679815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 20679816 . G . PASS END=20679816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 20679817 . C . PASS END=20679820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 20679821 . G . PASS END=20679823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 20679824 . T . PASS END=20679825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 20679826 . A . PASS END=20679857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1133:0,80,255:38,0 chr2 20679858 . T C, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=3.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:18,21,0:0.538,0.000:39:8,14,0:10,7,0:47:85,0,46,185,185,185:255,0,255:18,0:5.0000e+01,9.3190e-05,4.9404e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,7,11,10:5,13,10,11:20679858 chr2 20679859 . C . PASS END=20679859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 20679860 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.369;ReadPosRankSum=2.596;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:18,22,0:0.550,0.000:40:8,14,0:10,8,0:47:85,0,46,185,185,185:255,0,255:18,0:5.0000e+01,9.3190e-05,4.9404e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,7,12,10:5,13,10,12:20679858 chr2 20679861 . T . PASS END=20679901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,103,1390:0,103,255:40,0 chr2 20679902 . C . PASS END=20679956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,99,1352:0,100,255:40,0 chr2 20679957 . C . PASS END=20679957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1062:0,52,255:29,0 chr2 20679958 . T . PASS END=20679970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1117:0,80,255:32,0 chr2 20679971 . C . PASS END=20679971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 20679972 . T . PASS END=20679973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 20679974 . C . PASS END=20679974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 20679975 . C . PASS END=20679976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 20679977 . G . PASS END=20679978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 20679979 . A . PASS END=20679979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:22,0 chr2 20679980 . C . PASS END=20680015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr2 20688499 . C . PASS END=20688503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr2 20688504 . T . PASS END=20688505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 20688506 . C . PASS END=20688506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:21,0 chr2 20688507 . C . PASS END=20688512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 20688513 . A . PASS END=20688513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 20688514 . G . PASS END=20688514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 20688515 . C . PASS END=20688515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 20688516 . A . PASS END=20688518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,939:0,62,255:26,0 chr2 20688519 . C T, 48.35 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=0.623;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:5,7,0:10,4,0:47:83,0,50,336,528,864:255,0,255:15,0:4.8348e+01,8.5166e-05,5.3000e+01,3.3576e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,4,5,6:7,8,3,8 chr2 20688520 . T . PASS END=20688527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:26,0 chr2 20688528 . C . PASS END=20688535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:29,0 chr2 20688536 . C . PASS END=20688549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 20688550 . C . PASS END=20688552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 20688553 . T . PASS END=20688553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 20688554 . G . PASS END=20688556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1141:0,90,255:30,0 chr2 20688557 . A . PASS END=20688576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1012:0,90,255:31,0 chr2 20688577 . A . PASS END=20688578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:29,0 chr2 20688579 . A . PASS END=20688581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 20688582 . T . PASS END=20688582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 20688583 . C . PASS END=20688628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1169:0,80,255:34,0 chr2 20688629 . A . PASS END=20688636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,834:0,64,255:26,0 chr2 20688637 . T . PASS END=20688638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20688639 . C . PASS END=20688639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 20688640 . A . PASS END=20688641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:23,0 chr2 20688642 . T . PASS END=20688642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:22,0 chr2 20688643 . T . PASS END=20688643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:22,0 chr2 20688644 . A . PASS END=20688651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,939:0,64,255:22,0 chr2 20688652 . C . PASS END=20688652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 20688653 . C . PASS END=20688654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 20688655 . A . PASS END=20688655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 20688656 . G . PASS END=20688663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:25,0 chr2 20688664 . T . PASS END=20688664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,821:0,36,255:23,0 chr2 20688665 . C . PASS END=20688665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 20688666 . T . PASS END=20688669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 20700926 . C . PASS END=20700926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 20700927 . T . PASS END=20700927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:24,0 chr2 20700928 . G . PASS END=20700937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1151:0,80,255:32,0 chr2 20700938 . G . PASS END=20701046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:33:0,87,1182:0,87,255:40,0 chr2 20701047 . A . PASS END=20701047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:31,0 chr2 20701048 . C . PASS END=20701051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 20701052 . T . PASS END=20701058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,900:0,72,255:25,0 chr2 20701059 . C . PASS END=20701059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:32:0,54,810:0,96,255:18,0 chr2 20701060 . A . PASS END=20701060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,898:0,15,255:17,0 chr2 20701061 . T . PASS END=20701061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:29:0,51,765:0,87,255:17,0 chr2 20753636 . T . PASS END=20753673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,101,1410:0,101,255:40,0 chr2 20753674 . T . PASS END=20753705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,111,1742:0,111,255:40,0 chr2 20757322 . C . PASS END=20757415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,101,1310:0,101,255:40,0 chr2 20757864 . T . PASS END=20757954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:38:0,99,1485:0,113,255:40,0 chr2 20760099 . C . PASS END=20760113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:23,0 chr2 20760114 . A . PASS END=20760127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:26,0 chr2 20760128 . C . PASS END=20760136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,995:0,81,255:32,0 chr2 20760137 . C . PASS END=20760137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr2 20760138 . A . PASS END=20760150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1209:0,96,255:34,0 chr2 20760151 . A G, 164.38 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,18,0:0,21,0:114:202,117,0,1502,117,1502:255,117,0:0,0:1.6438e+02,1.1438e+02,0.0000e+00,4.5000e+02,1.4915e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,14:0,0,20,19 chr2 20760152 . T . PASS END=20760188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,108,1573:0,110,255:40,0 chr2 20760189 . G . PASS END=20760275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:32:0,81,1202:0,86,255:40,0 chr2 20818747 . T . PASS END=20818750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 20818751 . A . PASS END=20818763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:16,0 chr2 20818764 . C T, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.308;ReadPosRankSum=2.573;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,8,0:0.500,0.000:16:3,3,0:5,5,0:48:85,0,50,286,286,572:255,0,255:8,0:5.0000e+01,6.5233e-05,5.3000e+01,2.8618e+02,3.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,7,1:4,4,4,4 chr2 20818765 . G . PASS END=20818765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr2 20818766 . G . PASS END=20818786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:18,0 chr2 20818787 . T . PASS END=20818787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 20818788 . C . PASS END=20818790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 20818791 . G . PASS END=20818794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 20818795 . G . PASS END=20818795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 20818796 . T . PASS END=20818801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 20818802 . A . PASS END=20818839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:26,0 chr2 20818840 . C . PASS END=20818840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 20818841 . G . PASS END=20818855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr2 20818856 . G . PASS END=20818875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:30,0 chr2 20818876 . C . PASS END=20818877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 20818878 . C . PASS END=20818905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1054:0,82,255:29,0 chr2 20818906 . T . PASS END=20818906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr2 20818907 . A . PASS END=20818915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 20818916 . T . PASS END=20818916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 20818917 . T . PASS END=20818928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 20818929 . G . PASS END=20818972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:26,0 chr2 20818973 . A . PASS END=20818974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 20818975 . G . PASS END=20818979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 20818980 . G . PASS END=20819005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr2 20822058 . T . PASS END=20822079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,180,255:40,0 chr2 20823619 . T . PASS END=20823620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 20823621 . A . PASS END=20823621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 20823622 . G . PASS END=20823622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 20823623 . A . PASS END=20823624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 20823625 . C . PASS END=20823649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 20823650 . T . PASS END=20823686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1186:0,93,255:37,0 chr2 20823687 . T . PASS END=20823723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1327:0,95,255:37,0 chr2 20823724 . T C, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,20,0:0,15,0:102:190,105,0,1357,105,1357:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,20:0,0,18,17 chr2 20823725 . G . PASS END=20823726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 20823727 . C . PASS END=20823727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr2 20823728 . A . PASS END=20823761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1312:0,96,255:35,0 chr2 20823762 . C . PASS END=20823778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr2 20823779 . A . PASS END=20823791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:25,0 chr2 20824492 . G . PASS END=20824493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1211:0,99,255:35,0 chr2 20824494 . T . PASS END=20824494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:34,0 chr2 20824495 . C . PASS END=20824497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:37,0 chr2 20824498 . C T, 50.00 PASS DP=37;MQ=250.00;MQRankSum=4.735;ReadPosRankSum=1.412;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,26,0:0.703,0.000:37:6,9,0:5,17,0:39:85,0,36,914,385,1299:255,0,255:11,0:5.0001e+01,5.4105e-04,3.9408e+01,4.5000e+02,4.2022e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,2,16,10:6,5,11,15 chr2 20824499 . G . PASS END=20824499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 20824500 . G . PASS END=20824500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1410:0,73,255:37,0 chr2 20824501 . A . PASS END=20824558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:38:0,90,1440:0,90,255:40,0 chr2 20824559 . C T, 45.08 PASS DP=50;MQ=250.00;MQRankSum=5.876;ReadPosRankSum=0.420;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,19,0:0.380,0.000:50:15,12,0:16,7,0:44:80,0,50,660,1067,1727:255,0,255:29,0:4.5083e+01,1.5661e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,16,14,5:13,18,9,10 chr2 20824560 . T . PASS END=20824596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,102,1542:0,102,255:40,0 chr2 20824597 . G . PASS END=20824620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,105,1582:0,105,255:40,0 chr2 20824621 . C . PASS END=20824652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1305:0,97,255:39,0 chr2 20838177 . T . PASS END=20838184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:35,0 chr2 20838185 . A . PASS END=20838221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:36:0,96,1427:0,104,255:40,0 chr2 20838222 . C T, 48.92 PASS DP=45;MQ=250.00;MQRankSum=5.699;ReadPosRankSum=5.014;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,20,0:0.444,0.000:45:10,11,0:15,9,0:47:84,0,50,707,885,1592:255,0,255:22,0:4.8925e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,14,12,8:14,11,11,9 chr2 20838223 . T . PASS END=20838259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,122,255:40,0 chr2 20838260 . T . PASS END=20838280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1651:0,119,255:40,0 chr2 20838281 . C . PASS END=20838313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,108,1519:0,113,255:40,0 chr2 20838314 . A . PASS END=20838314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1227:0,67,255:35,0 chr2 20838315 . G . PASS END=20838317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 20838318 . G A, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.137;ReadPosRankSum=4.689;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,23,0:0.605,0.000:38:8,14,0:7,9,0:47:85,0,46,820,520,1340:255,0,255:12,0:5.0000e+01,9.4226e-05,4.9309e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,14,9:7,8,17,6 chr2 20838319 . A . PASS END=20838320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:35,0 chr2 20838321 . A . PASS END=20838321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1259:0,75,255:32,0 chr2 20838322 . G . PASS END=20838345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1239:0,86,255:34,0 chr2 20838346 . C . PASS END=20838346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr2 20838347 . T . PASS END=20838353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:34:0,87,1235:0,91,255:35,0 chr2 20838354 . G . PASS END=20838355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,75,255:24,0 chr2 20838356 . C . PASS END=20838369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:65:27:0,65,937:0,65,255:26,0 chr2 20838370 . G . PASS END=20838370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:24,0 chr2 20838371 . A . PASS END=20838371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 20838372 . A . PASS END=20838377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 20838378 . G . PASS END=20838388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr2 20838389 . C . PASS END=20838389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:21,0 chr2 20838390 . T . PASS END=20838397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,917:0,64,255:23,0 chr2 20838398 . C . PASS END=20838398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,731:0,39,255:20,0 chr2 20838399 . T . PASS END=20838399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr2 20838400 . G . PASS END=20838400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 20838401 . G . PASS END=20838401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 20838402 . G . PASS END=20838402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 20838403 . G . PASS END=20838403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,753:0,17,255:16,0 chr2 20838404 . A . PASS END=20838408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,810:0,53,255:18,0 chr2 20838409 . G . PASS END=20838409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:16,0 chr2 20838410 . T . PASS END=20838412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,782:0,53,255:19,0 chr2 20840539 . T . PASS END=20840556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 20840557 . G . PASS END=20840562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 20840563 . T . PASS END=20840563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 20840564 . T . PASS END=20840575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr2 20840576 . C . PASS END=20840606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,698:0,57,255:19,0 chr2 20840607 . T . PASS END=20840610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 20840611 . C . PASS END=20840611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 20840612 . A . PASS END=20840613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 20840614 . C . PASS END=20840636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,47,255:19,0 chr2 20840637 . A . PASS END=20840637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 20840638 . G . PASS END=20840641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 20840642 . C . PASS END=20840642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 20840643 . A . PASS END=20840689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:18,0 chr2 20840690 . G . PASS END=20840692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 20840693 . C . PASS END=20840693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 20840694 . C . PASS END=20840694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 20840695 . G . PASS END=20840695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 20840696 . G . PASS END=20840702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 20840703 . C . PASS END=20840703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 20840704 . T . PASS END=20840714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,914:0,69,255:24,0 chr2 20840715 . G . PASS END=20840715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 20840716 . G . PASS END=20840720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 20840721 . A . PASS END=20840738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1015:0,81,255:30,0 chr2 20840739 . A . PASS END=20840739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 20840740 . C . PASS END=20840765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:30,0 chr2 20840766 . A . PASS END=20840766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:26,0 chr2 20840767 . C . PASS END=20840773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 20840774 . T . PASS END=20840775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 20840776 . C . PASS END=20840790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1015:0,80,255:29,0 chr2 20840791 . C . PASS END=20840791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 20840792 . A . PASS END=20840794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 20840795 . A . PASS END=20840795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 20840796 . T . PASS END=20840799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:30,0 chr2 20840800 . A . PASS END=20840800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1002:0,60,255:29,0 chr2 20840801 . T . PASS END=20840801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1044:0,93,255:31,0 chr2 20840802 . T . PASS END=20840802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr2 20840803 . G . PASS END=20840875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1045:0,85,255:36,0 chr2 20840876 . G . PASS END=20840876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:32,0 chr2 20840877 . C . PASS END=20840902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1131:0,89,255:34,0 chr2 20840903 . T . PASS END=20840903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 20840904 . G . PASS END=20840908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 20840909 . A . PASS END=20840909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr2 20840910 . A . PASS END=20840927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1063:0,84,255:28,0 chr2 20840928 . A . PASS END=20840928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 20840929 . C . PASS END=20840935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 20840936 . G . PASS END=20840940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 20845100 . C . PASS END=20845102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr2 20845103 . G . PASS END=20845103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 20845104 . A . PASS END=20845104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:27,0 chr2 20845105 . A . PASS END=20845148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1202:0,86,255:37,0 chr2 20845149 . G . PASS END=20845149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr2 20845150 . C . PASS END=20845232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1260:0,83,255:39,0 chr2 20845233 . A . PASS END=20845235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 20845236 . T . PASS END=20845264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr2 20845265 . C . PASS END=20845265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 20850792 . C . PASS END=20850813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 20850814 . G . PASS END=20850815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 20850816 . G . PASS END=20850822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr2 20850823 . T . PASS END=20850823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 20867000 . A . PASS END=20867004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 20867005 . C . PASS END=20867025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 20867026 . G . PASS END=20867050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr2 20867051 . C . LowGQ END=20867220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr2 20867221 . C . PASS END=20867244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 20867245 . G . LowGQ END=20867245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 20867246 . A . PASS END=20867246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 20867247 . A . LowGQ END=20867247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 20867248 . C . PASS END=20867257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr2 20867258 . G . LowGQ END=20867258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:5,0 chr2 20867259 . T . PASS END=20867267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 20867268 . A . PASS END=20867268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 20867269 . C . PASS END=20867269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 20867270 . T . PASS END=20867270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 20867271 . T . PASS END=20867273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 20867274 . T . PASS END=20867274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 20867275 . G . PASS END=20867286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr2 20867287 . C . PASS END=20867287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 20867288 . C . PASS END=20867304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 20867305 . G . PASS END=20867310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 20867311 . G . PASS END=20867314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 20867315 . G . PASS END=20867316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr2 20867317 . G . PASS END=20867324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 20867325 . C . PASS END=20867325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 20867326 . T . PASS END=20867326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 20867327 . G . PASS END=20867327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 20867328 . T . PASS END=20867329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr2 20867330 . T . PASS END=20867332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 20867333 . G . PASS END=20867333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 20867334 . C . PASS END=20867335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 20867336 . T . PASS END=20867336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 20867337 . C . PASS END=20867381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:12,0 chr2 20867382 . C . PASS END=20867383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 20867384 . A . PASS END=20867384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 20867385 . C . PASS END=20867387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 20867388 . A . PASS END=20867388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:7,0 chr2 20867389 . A . PASS END=20867390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 20870224 . A . PASS END=20870233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 20870234 . A . PASS END=20870294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,792:0,62,255:26,0 chr2 20870295 . G . PASS END=20870295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 20870296 . T . PASS END=20870298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 20870299 . G . PASS END=20870299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr2 20870300 . T . PASS END=20870367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,809:0,67,255:26,0 chr2 20870368 . T . PASS END=20870369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr2 20870370 . C . PASS END=20870370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 20870371 . T . PASS END=20870374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,1016:0,48,255:24,0 chr2 20870375 . G . PASS END=20870407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 20870408 . A . PASS END=20870442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr2 20870443 . T . PASS END=20870443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:12,0 chr2 20870444 . C . PASS END=20870473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:16,0 chr2 20870474 . G . PASS END=20870474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 20870475 . G . PASS END=20870475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 20870476 . A . PASS END=20870488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr2 20870489 . C . PASS END=20870489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 20870490 . C . PASS END=20870520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,310:0,24,255:9,0 chr2 20870521 . T . PASS END=20870530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:9:0,11,270:0,11,255:6,0 chr2 20870531 . G A, 49.35 PASS DP=9;MQ=250.00;MQRankSum=2.219;ReadPosRankSum=2.219;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:5,4,0:0.444,0.000:9:2,2,0:3,2,0:47:84,0,47,184,184,184:84,0,145:2,0:4.9349e+01,9.3967e-05,5.0000e+01,1.8412e+02,2.1889e+02,1.8713e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,4,1,3:2,3,3,1:20870531 chr2 20870532 . C A, 49.76 PASS DP=9;MQ=250.00;MQRankSum=2.219;ReadPosRankSum=1.881;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:5,4,0:0.444,0.000:9:2,2,0:3,2,0:47:85,0,47,185,185,185:128,0,167:2,0:4.9758e+01,8.9308e-05,5.0000e+01,1.8453e+02,2.1930e+02,1.8754e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,4,1,3:2,3,3,1:20870531 chr2 20870533 . T . PASS END=20870552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,194:6,0 chr2 20870553 . G . PASS END=20870578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr2 20870579 . G A, 50.00 PASS DP=9;MQ=250.00;MQRankSum=2.219;ReadPosRankSum=-0.361;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,5,0:0.556,0.000:9:2,0,0:2,5,0:48:85,0,50,179,143,322:167,0,128:4,0:5.0000e+01,6.6527e-05,5.2758e+01,1.7883e+02,1.7784e+02,3.2489e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,3,2:3,1,2,3 chr2 20870580 . C . PASS END=20870595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 20870596 . C . PASS END=20870616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr2 20870617 . C . PASS END=20870619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr2 20870620 . A . PASS END=20870627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 20870628 . G . PASS END=20870630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 20870631 . G . PASS END=20870643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 20870644 . C . PASS END=20870678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 20870679 . G . PASS END=20870689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 20870690 . C . PASS END=20870697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 20870698 . G . LowGQ END=20870698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:7,0 chr2 20870699 . C . PASS END=20870716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 20870717 . G . PASS END=20870753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,202:0,18,202:6,0 chr2 20870754 . G . PASS END=20870756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 20870757 . T . PASS END=20870758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 20870759 . G . PASS END=20870769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr2 20870770 . T . PASS END=20870780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr2 20870781 . C . PASS END=20870814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 20870815 . G . PASS END=20870816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 20870817 . A . PASS END=20870817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 20870818 . C . PASS END=20870818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:8,0 chr2 20870819 . A . PASS END=20870824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 20870825 . G . PASS END=20870856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:12,0 chr2 20870857 . G . PASS END=20870891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 20870892 . T . PASS END=20870894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 20870895 . C . PASS END=20870898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 20870899 . T . PASS END=20870900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 20870901 . G . PASS END=20870920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,44,255:20,0 chr2 20870921 . G . PASS END=20870933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr2 20870934 . A . PASS END=20870934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 20870935 . T . PASS END=20870946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 20870947 . A . PASS END=20870947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 20870948 . C . PASS END=20870949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 20870950 . A . PASS END=20870950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr2 20870951 . C . PASS END=20871043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,854:0,61,255:26,0 chr2 20871044 . C . PASS END=20871044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 20871045 . A . PASS END=20871049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 20871050 . A . PASS END=20871051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 20871052 . C . PASS END=20871059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 20871060 . G . PASS END=20871060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 20871061 . C . PASS END=20871064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 20871065 . G . PASS END=20871067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 20871068 . C . PASS END=20871084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:23,0 chr2 20871085 . C . PASS END=20871145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,644:0,43,255:21,0 chr2 20871146 . A . PASS END=20871146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 20871147 . T . PASS END=20871147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:14,0 chr2 20871148 . A . PASS END=20871152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,553:0,48,255:16,0 chr2 20871153 . G . PASS END=20871159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr2 20871160 . T . PASS END=20871172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,32,255:13,0 chr2 20871173 . C . PASS END=20871185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:22:10:0,22,404:0,22,255:9,0 chr2 20884656 . T . PASS END=20884683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:89:0,120,1800:0,236,255:40,0 chr2 20885307 . C . PASS END=20885320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,149,255:40,0 chr2 20885321 . C A, 48.11 PASS DP=56;MQ=250.00;MQRankSum=6.349;ReadPosRankSum=2.790;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,24,0:0.429,0.000:56:20,7,0:12,17,0:47:83,0,50,803,1120,1924:255,0,255:32,0:4.8115e+01,8.8790e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,11,13,11:19,13,14,10 chr2 20885322 . A . PASS END=20885358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,141,255:40,0 chr2 20885359 . T . PASS END=20885417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,111,1665:0,132,255:40,0 chr2 20886663 . T . PASS END=20886816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:33:0,92,1241:0,92,255:40,0 chr2 20886817 . G . PASS END=20886817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:30,0 chr2 20886818 . G . PASS END=20886823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,98,255:32,0 chr2 20886824 . A . PASS END=20886841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:25:0,66,990:0,68,255:25,0 chr2 20886842 . A . PASS END=20886842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr2 20886843 . A . PASS END=20886848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr2 20886849 . T . PASS END=20886849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr2 20886850 . G . PASS END=20886850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 20886851 . T . PASS END=20886854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr2 20901330 . C . PASS END=20901412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,143,255:40,0 chr2 20939731 . C . PASS END=20939965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:50:0,120,1800:0,122,255:40,0 chr2 20974570 . C . PASS END=20974732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:38:0,96,1325:0,98,255:40,0 chr2 20974733 . T . PASS END=20974733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1014:0,47,255:29,0 chr2 20974734 . T . PASS END=20974739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:37:0,93,1395:0,94,255:32,0 chr2 20988928 . T . PASS END=20988928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr2 20988929 . T . PASS END=20988930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 20988931 . T . PASS END=20988931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr2 20988932 . A . PASS END=20988938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1066:0,90,255:30,0 chr2 20988939 . C . PASS END=20988940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 20988941 . A . PASS END=20988941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 20988942 . A . PASS END=20988942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr2 20988943 . A . PASS END=20988946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 20988947 . A . PASS END=20988948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 20988949 . A . PASS END=20988962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1140:0,80,255:33,0 chr2 20988963 . G . PASS END=20988963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:32,0 chr2 20988964 . C . PASS END=20988976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1133:0,82,255:31,0 chr2 20988977 . A . PASS END=20988977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 20988978 . A . PASS END=20988982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1186:0,93,255:31,0 chr2 20988983 . T . PASS END=20988983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 20988984 . G . PASS END=20988987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 20988988 . A . PASS END=20988988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 20988989 . G . PASS END=20989004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr2 20989005 . A . PASS END=20989005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 20989006 . A . PASS END=20989031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1233:0,86,255:34,0 chr2 20989032 . T . PASS END=20989032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1232:0,58,255:30,0 chr2 20989033 . A . PASS END=20989046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:33,0 chr2 20989047 . T . PASS END=20989074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr2 20989075 . C . PASS END=20989075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 20989076 . C . PASS END=20989084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr2 20989085 . A . PASS END=20989085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr2 20989086 . C . PASS END=20989086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 20989087 . A . PASS END=20989100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr2 20990015 . C . PASS END=20990158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:92:38:0,92,1385:0,92,255:40,0 chr2 21001052 . C . PASS END=21001060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr2 21001061 . T . PASS END=21001061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 21001062 . A . PASS END=21001075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1027:0,83,255:35,0 chr2 21001076 . T . PASS END=21001076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr2 21001077 . A . PASS END=21001207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1094:0,86,255:40,0 chr2 21001208 . T . PASS END=21001208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 21001209 . G . PASS END=21001215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 21001216 . G . PASS END=21001223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr2 21224337 . C . PASS END=21224337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 21224373 . T . PASS END=21224373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 21224395 . G . PASS END=21224395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 21224422 . C . PASS END=21224423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 21224431 . G . PASS END=21224431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 21224472 . T . PASS END=21224472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 21224485 . C . PASS END=21224485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 21224517 . A . PASS END=21224517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,123,255:40,0 chr2 21224571 . A . PASS END=21224571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 21224591 . C . PASS END=21224591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 21224602 . T . PASS END=21225243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:96:50:0,96,1733:0,96,255:40,0 chr2 21225244 . T . PASS END=21225280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:82:0,120,1800:0,216,255:40,0 chr2 21225281 . C T, 291.95 PASS DP=83;MQ=250.00;FractionInformativeReads=0.988 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,82,0:1.000,0.000:82:0,36,0:0,46,0:242:330,245,0,3038,245,3038:255,246,0:0,0:2.9195e+02,2.4195e+02,0.0000e+00,4.5000e+02,2.7672e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,43,39:0,0,43,39 chr2 21225282 . T . PASS END=21225318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:76:0,120,1800:0,207,255:40,0 chr2 21225319 . A . PASS END=21225804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:35:0,81,1215:0,103,255:40,0 chr2 21225805 . A . PASS END=21225807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 21225808 . G . PASS END=21226128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:32:0,83,1156:0,83,255:40,0 chr2 21226129 . T . PASS END=21226129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:75:52:0,75,1637:0,75,255:40,0 chr2 21226130 . T . PASS END=21226169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:42:0,88,1550:0,88,255:40,0 chr2 21226170 . C . PASS END=21226176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:38:0,87,1305:0,87,255:32,0 chr2 21226177 . G . PASS END=21226177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1207:0,66,255:30,0 chr2 21226178 . A . PASS END=21226180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:38:0,83,1343:0,83,255:32,0 chr2 21226181 . A . PASS END=21226181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:28,0 chr2 21226182 . T . PASS END=21226182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 21226183 . G . PASS END=21226183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:29,0 chr2 21226184 . G . PASS END=21226184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 21226185 . T . PASS END=21226185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:28,0 chr2 21226186 . G . PASS END=21226192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr2 21226193 . T . PASS END=21226197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1056:0,76,255:26,0 chr2 21226198 . T . PASS END=21226199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:25,0 chr2 21226200 . G . PASS END=21226201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr2 21226202 . G . PASS END=21226206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,765:0,42,255:17,0 chr2 21226218 . G . LowGQ END=21226218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,419:51,0,255:16,3 chr2 21226220 . A . LowGQ END=21226220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,535:34,0,255:16,0 chr2 21227141 . C . PASS END=21227324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:35:0,89,1278:0,89,255:40,0 chr2 21227339 . A . PASS END=21227339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr2 21227429 . A . PASS END=21227429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 21227433 . T . PASS END=21227549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,120,1800:0,140,255:40,0 chr2 21227554 . A . PASS END=21227555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1710:0,144,255:38,0 chr2 21227952 . C . PASS END=21229793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1320:0,81,255:40,1 chr2 21229794 . A . PASS END=21229794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:55:51:0,55,1392:0,55,255:40,0 chr2 21229795 . A . PASS END=21231274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:42:0,91,1472:0,91,255:40,0 chr2 21231275 . A . PASS END=21231275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1421:0,74,255:38,0 chr2 21231276 . G . PASS END=21232157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:39:0,83,1330:0,83,255:40,1 chr2 21232158 . T . PASS END=21232194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,114,1659:0,119,255:40,0 chr2 21232195 . G A, 48.56 PASS DP=50;MQ=250.00;MQRankSum=6.010;ReadPosRankSum=2.844;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,22,0:0.440,0.000:50:12,9,0:16,13,0:47:83,0,50,713,985,1698:255,0,255:23,0:4.8556e+01,8.2318e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,7,15:9,19,14,8 chr2 21232196 . G . PASS END=21232232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,113,1527:0,113,255:40,0 chr2 21232233 . C . PASS END=21232760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:92:45:0,92,1629:0,92,255:40,0 chr2 21232761 . C . PASS END=21232802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,168,255:40,0 chr2 21232803 . T C, 1028.58 PASS DP=62;MQ=249.82;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,21,0:0,40,0:450:1066,982,0,1166,1166,1166:255,183,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,26,35:0,0,38,23 chr2 21232804 . G A, 49.98 PASS DP=59;MQ=249.81;MQRankSum=6.473;ReadPosRankSum=5.323;FractionInformativeReads=0.966;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,28,0:0.491,0.000:57:8,10,0:21,18,0:47:85,0,47,185,185,185:255,0,255:24,0:4.9978e+01,8.6978e-05,5.0000e+01,1.8475e+02,2.1952e+02,1.8776e+02:0.00,34.77,37.78,34.77,69.54,37.78:14,15,11,17:19,10,17,11 chr2 21232805 . T . PASS END=21232846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,132,255:40,0 chr2 21232847 . A . PASS END=21233792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:95:37:0,95,1319:0,95,255:40,0 chr2 21233793 . G . PASS END=21233793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr2 21233794 . T . PASS END=21235121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:36:0,83,1199:0,83,255:40,0 chr2 21235122 . C . PASS END=21235122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1197:0,70,255:35,0 chr2 21235123 . A . PASS END=21235437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:35:0,90,1344:0,90,255:40,0 chr2 21235438 . A . PASS END=21235474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,174,255:40,0 chr2 21235475 . T C, 251.65 PASS DP=68;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,31,0:0,37,0:202:289,205,0,2612,205,2612:255,208,0:0,0:2.5165e+02,2.0165e+02,0.0000e+00,4.5000e+02,2.3642e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,34:0,0,35,33 chr2 21235476 . A . PASS END=21235512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:42:0,108,1499:0,108,255:40,0 chr2 21235513 . T . PASS END=21235523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1395:0,110,255:37,0 chr2 21236028 . T . PASS END=21236028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 21236032 . C . PASS END=21236037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr2 21236038 . C . PASS END=21236039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 21236040 . T . PASS END=21236040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 21236041 . T . PASS END=21236045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr2 21236046 . G . PASS END=21236046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:21,0 chr2 21236047 . A . PASS END=21236049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,813:0,69,255:23,0 chr2 21236050 . G . PASS END=21236050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 21236051 . C . PASS END=21236052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 21236053 . G . PASS END=21236053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 21236054 . G . PASS END=21236064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,856:0,62,255:26,0 chr2 21236065 . A . PASS END=21236073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr2 21236074 . T . PASS END=21236074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 21236075 . C . PASS END=21236078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:31,0 chr2 21236079 . T . PASS END=21236079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 21236080 . G . PASS END=21236093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1156:0,93,255:32,0 chr2 21236094 . A . PASS END=21236094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:31,0 chr2 21236095 . G . PASS END=21236111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1302:0,92,255:39,0 chr2 21236112 . C . PASS END=21236112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr2 21236113 . T . PASS END=21236133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,108,1445:0,117,255:40,0 chr2 21236134 . A . PASS END=21236134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1427:0,74,255:40,0 chr2 21236135 . G . PASS END=21236405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,111,1627:0,119,255:40,0 chr2 21237320 . C . PASS END=21237433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:38:0,90,1305:0,94,255:40,0 chr2 21237434 . C . PASS END=21237438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 21237439 . T . PASS END=21237447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1115:0,80,255:30,0 chr2 21237448 . A . PASS END=21237465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:25,0 chr2 21237945 . A . PASS END=21237949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1266:0,89,255:35,0 chr2 21237950 . T . PASS END=21237950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr2 21237951 . T . PASS END=21237963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1219:0,89,255:36,0 chr2 21237964 . A . PASS END=21237964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:35,0 chr2 21237965 . C . PASS END=21237977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1278:0,92,255:35,0 chr2 21237978 . C . PASS END=21237978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:35,0 chr2 21237979 . A . PASS END=21238132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:94:36:0,94,1296:0,94,255:40,1 chr2 21238143 . G . PASS END=21238143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 21238242 . C . PASS END=21238403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:33:0,87,1274:0,90,255:40,0 chr2 21238404 . C . PASS END=21238404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:27,0 chr2 21238405 . C . PASS END=21238405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 21238406 . T . PASS END=21238406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,906:0,79,255:28,0 chr2 21238407 . T . PASS END=21238409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 21238410 . T . PASS END=21238410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:26,0 chr2 21238411 . G . PASS END=21238412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 21238413 . C . PASS END=21238417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr2 21239299 . G . PASS END=21239299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 21239311 . C . PASS END=21239316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1149:0,82,255:33,0 chr2 21239317 . T . PASS END=21239317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1108:0,52,255:31,0 chr2 21239318 . G . PASS END=21239340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1180:0,81,255:40,0 chr2 21239341 . A . PASS END=21239341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1455:0,77,255:37,0 chr2 21239342 . T . PASS END=21239521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1215:0,96,255:40,0 chr2 21239527 . C . PASS END=21239527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:22,0 chr2 21239533 . T . PASS END=21239533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 21241864 . C . PASS END=21241870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1459:0,117,255:39,0 chr2 21241871 . T . PASS END=21241871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:38,0 chr2 21241872 . T . PASS END=21241985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,102,1421:0,102,255:40,0 chr2 21242587 . T . PASS END=21242587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 21242595 . C . PASS END=21242608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr2 21242609 . C . PASS END=21242609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:22,0 chr2 21242610 . A . PASS END=21242615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,955:0,72,255:26,0 chr2 21242616 . T . PASS END=21242618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 21242619 . T . PASS END=21242619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 21242620 . A . PASS END=21242620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:25,0 chr2 21242621 . G . PASS END=21242625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 21242626 . C . PASS END=21242631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 21242632 . C . PASS END=21242640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1102:0,84,255:29,0 chr2 21242641 . T . PASS END=21242642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 21242643 . G . PASS END=21242644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 21242645 . G . PASS END=21242645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 21242646 . T . PASS END=21242687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1185:0,80,255:33,0 chr2 21242688 . A . PASS END=21242688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 21242689 . C . PASS END=21242699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1194:0,93,255:31,0 chr2 21242700 . A . PASS END=21242700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,952:0,62,255:28,0 chr2 21242701 . C . PASS END=21242726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,86,255:34,0 chr2 21242727 . A . PASS END=21242745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr2 21242746 . T . PASS END=21242746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,1 chr2 21242747 . T . PASS END=21242755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,893:0,75,255:25,0 chr2 21242756 . A . PASS END=21242768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:20:0,48,720:0,55,255:19,0 chr2 21242769 . A . PASS END=21242769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:14,0 chr2 21242770 . A . PASS END=21242777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,675:0,44,255:15,0 chr2 21245703 . C . PASS END=21245703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 21245704 . C . PASS END=21245709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,886:0,66,255:24,0 chr2 21245710 . T . PASS END=21245710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,749:0,22,255:21,0 chr2 21245711 . G . PASS END=21245712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 21245713 . G . PASS END=21245713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 21245714 . C . PASS END=21245714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 21245715 . A . PASS END=21245715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 21245716 . G . PASS END=21245728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 21245729 . C . PASS END=21245732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 21245733 . G . PASS END=21245733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 21245734 . G . PASS END=21245736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 21245737 . A . PASS END=21245739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 21245740 . G . PASS END=21245744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 21245745 . A . PASS END=21245745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:29,1 chr2 21245746 . T . PASS END=21245746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 21245747 . A . PASS END=21245755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 21245756 . C . PASS END=21245756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 21245757 . T . PASS END=21245914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1211:0,84,255:40,0 chr2 21245920 . A . PASS END=21245920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1341:0,95,255:32,0 chr2 21246396 . C . PASS END=21246401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,698:0,44,255:19,0 chr2 21246402 . C . PASS END=21246421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,721:0,60,255:25,0 chr2 21246422 . G . PASS END=21246423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 21246424 . C . PASS END=21246426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr2 21246427 . G . PASS END=21246445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1294:0,89,255:35,0 chr2 21246446 . C . PASS END=21246446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:34,0 chr2 21246447 . C . PASS END=21246564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:36:0,84,1288:0,84,255:40,0 chr2 21246566 . T . PASS END=21246566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:38:0,90,1350:0,97,255:29,0 chr2 21247666 . T . PASS END=21247748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,109,1798:0,109,255:40,0 chr2 21247805 . C . PASS END=21247972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1215:0,82,255:40,0 chr2 21247973 . G . PASS END=21247993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:25,0 chr2 21247994 . A . PASS END=21247994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:20,0 chr2 21247995 . T . PASS END=21247996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,925:0,64,255:22,0 chr2 21249656 . A . PASS END=21249657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:16,0 chr2 21249660 . C . PASS END=21249672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,662:0,41,255:19,0 chr2 21249673 . T . PASS END=21249680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 21249681 . G . PASS END=21249681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 21249682 . G . PASS END=21249685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 21249686 . A . PASS END=21249686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 21249687 . G . PASS END=21249693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:24,0 chr2 21249694 . T . PASS END=21249694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 21249695 . G . PASS END=21249697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 21249698 . C . PASS END=21249698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr2 21249699 . C . PASS END=21249699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 21249700 . A . PASS END=21249700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 21249701 . C . PASS END=21249705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 21249706 . A . PASS END=21249714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:33,0 chr2 21249715 . A . PASS END=21249715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1078:0,52,255:31,0 chr2 21249716 . C . PASS END=21249735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1197:0,92,255:35,0 chr2 21249736 . T . PASS END=21249736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:33,0 chr2 21249737 . T . PASS END=21249837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,105,1451:0,107,255:40,0 chr2 21249840 . A . PASS END=21249840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 21250698 . A . PASS END=21250698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr2 21250700 . C . PASS END=21250938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1215:0,89,255:40,0 chr2 21250943 . T . PASS END=21250943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 21250948 . A . PASS END=21250948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 21251199 . T . PASS END=21251410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:35:0,83,1305:0,83,255:40,0 chr2 21251412 . T . PASS END=21251412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:33,0 chr2 21251423 . G . PASS END=21251423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:28,0 chr2 21252504 . A . PASS END=21252504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 21252511 . C . PASS END=21252657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:90:36:0,90,1308:0,90,255:40,0 chr2 21252755 . A . PASS END=21252755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 21252770 . C . PASS END=21252887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:41:0,99,1485:0,116,255:40,0 chr2 21252899 . G . PASS END=21252899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 21255166 . G . PASS END=21255166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 21255224 . A . PASS END=21255224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 21255226 . T . PASS END=21255283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1180:0,83,255:36,0 chr2 21255284 . T . PASS END=21255284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:28,0 chr2 21255285 . G . PASS END=21255294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,985:0,82,255:29,0 chr2 21255295 . T . PASS END=21255295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,979:0,63,255:27,0 chr2 21255296 . C . PASS END=21255305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 21255306 . C . PASS END=21255307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 21255308 . G . PASS END=21255324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,83,255:32,0 chr2 21255325 . A . PASS END=21255325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr2 21255326 . T . PASS END=21255415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,92,255:40,0 chr2 21255416 . G . PASS END=21255441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr2 21255442 . A . PASS END=21255442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 21255443 . A . PASS END=21255453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 21256171 . C . PASS END=21256179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:18,0 chr2 21256180 . T . PASS END=21256201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr2 21256202 . A . PASS END=21256390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,930:0,81,255:40,0 chr2 21256405 . G . PASS END=21256405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 21257677 . G . PASS END=21257677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 21257688 . C . PASS END=21257773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:53:0,120,1800:0,151,255:40,0 chr2 21257775 . T . PASS END=21257775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,157,255:40,0 chr2 21257783 . A . PASS END=21257783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 21258442 . A . PASS END=21258442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 21258453 . T . PASS END=21258453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1241:0,86,255:32,0 chr2 21258456 . T . PASS END=21258564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:36:0,81,1252:0,81,255:40,0 chr2 21258565 . T . PASS END=21258565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1372:0,76,255:33,0 chr2 21258566 . T . PASS END=21258580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,92,255:36,0 chr2 21259972 . C . PASS END=21260127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,111,1665:0,120,255:40,0 chr2 21260135 . G . PASS END=21260135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 21260830 . C . PASS END=21260983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:28:0,84,1055:0,84,255:40,0 chr2 21260989 . C . PASS END=21260989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:30,0 chr2 21263810 . C . PASS END=21263862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,735:0,61,255:25,0 chr2 21263863 . T . PASS END=21263878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:26,0 chr2 21263879 . A . PASS END=21263879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr2 21263880 . A . PASS END=21263889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 21263890 . C . PASS END=21263890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 21263891 . T . PASS END=21263893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 21263894 . T . PASS END=21263894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr2 21263895 . T . PASS END=21263896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 21263897 . A . PASS END=21263899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 21263900 . G A, 49.31 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=3.586;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:8,4,0:6,7,0:48:84,0,50,384,459,843:255,0,255:8,0:4.9308e+01,7.2740e-05,5.3000e+01,3.8416e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,6,5:8,6,7,4 chr2 21263901 . T . PASS END=21263904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 21263905 . C . PASS END=21263908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 21263909 . C . PASS END=21263927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:19,0 chr2 21263928 . T . PASS END=21263937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 21263938 . G . PASS END=21263939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 21263940 . G . PASS END=21263955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 21265233 . C . PASS END=21265348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:43:0,112,1476:0,112,255:40,0 chr2 21265354 . G . PASS END=21265354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 21266385 . T . PASS END=21266423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,111,1613:0,111,255:40,0 chr2 21266434 . G . PASS END=21266434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 21266605 . T . PASS END=21266605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 21266728 . G . PASS END=21266728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr2 21266736 . C . LowDepth;LowGQ END=21266787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr2 21266788 . C . PASS END=21266810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 21266811 . G . PASS END=21266817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 21266835 . C . PASS END=21266835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr2 21266845 . G . PASS END=21266845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 21266888 . G . PASS END=21266888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 21266896 . A . PASS END=21266896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 21266899 . G . PASS END=21266899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 21266913 . A . PASS END=21266913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 21266932 . G . PASS END=21266932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 21360340 . A . PASS END=21360545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,110,1427:0,110,255:40,0 chr2 21360546 . A . PASS END=21360582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,113,1745:0,113,255:40,0 chr2 21360583 . A G, 50.00 PASS DP=58;MQ=248.33;MQRankSum=6.095;ReadPosRankSum=3.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,31,0:0.534,0.000:58:13,12,0:14,19,0:48:85,0,50,1093,929,2022:255,0,255:26,0:5.0000e+01,6.7563e-05,5.2565e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,13,14,17:16,11,21,10 chr2 21360584 . T . PASS END=21360596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,109,1669:0,109,255:40,0 chr2 21360597 . T . PASS END=21360597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,6:52:57:52:0,57,1555:0,57,255:40,0 chr2 21360598 . G . PASS END=21360601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,109,1717:0,109,255:40,0 chr2 21360602 . T . PASS END=21360602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:66:60:0,66,1754:0,66,255:35,0 chr2 21360603 . C . PASS END=21360620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:52:0,120,1800:0,120,255:40,0 chr2 21360621 . A . PASS END=21363014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:94:46:0,94,1456:0,94,255:40,2 chr2 21363015 . T . PASS END=21363015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,9:73:69:73:0,69,1997:0,69,255:40,0 chr2 21363016 . T . PASS END=21364259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,114,1662:0,114,255:40,0 chr2 21364260 . A . PASS END=21364260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:75:51:0,75,1687:0,75,255:40,0 chr2 21364261 . G . PASS END=21366144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:41:0,100,1489:0,100,255:40,2 chr2 23300683 . T . PASS END=23300784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,133,255:40,0 chr2 23300785 . T . PASS END=23300788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,117,1755:0,130,255:40,0 chr2 23301881 . C . PASS END=23301942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:85:0,120,1800:0,217,255:40,0 chr2 23313618 . C . PASS END=23313719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,111,1665:0,114,255:40,0 chr2 23313805 . C . PASS END=23313861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:39:0,102,1504:0,107,255:40,0 chr2 23313862 . G . PASS END=23313862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr2 23313863 . A . PASS END=23313874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,97,255:35,0 chr2 23421680 . C . PASS END=23421683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 23421684 . C . PASS END=23421699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr2 23421700 . A . PASS END=23421700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 23421701 . T . PASS END=23421714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr2 23421715 . T . PASS END=23421730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr2 23421731 . A . PASS END=23421731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,926:0,48,255:27,0 chr2 23421732 . A . PASS END=23421732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 23421733 . A . PASS END=23421735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 23421736 . C . PASS END=23421740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,964:0,73,255:26,0 chr2 23421741 . G . PASS END=23421742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 23421743 . G . PASS END=23421743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 23421744 . G . PASS END=23421744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 23421745 . A . PASS END=23421745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 23421746 . G . PASS END=23421750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 23421751 . G . PASS END=23421767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:25:0,64,947:0,64,255:26,0 chr2 23421768 . A . PASS END=23421768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 23421769 . G . PASS END=23421778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr2 23421779 . G . PASS END=23421869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1086:0,80,255:37,0 chr2 23421870 . A . PASS END=23421870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:33,0 chr2 23421871 . G . PASS END=23422045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1229:0,87,255:40,0 chr2 23422046 . T . PASS END=23422046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1274:0,70,255:35,0 chr2 23422047 . T . PASS END=23422071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,97,255:36,0 chr2 23422072 . A . PASS END=23422072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 23422073 . C . PASS END=23422073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 23422074 . T . PASS END=23422076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 23423100 . C . PASS END=23423127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,182,255:40,0 chr2 23785067 . A . PASS END=23785068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 23785069 . G . PASS END=23785083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr2 23785084 . C . PASS END=23785084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 23785085 . C . PASS END=23785106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr2 23785107 . T . PASS END=23785107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 23785108 . G . PASS END=23785108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 23785109 . G . LowGQ END=23785109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,371:8,0,255:11,0 chr2 23785110 . G . PASS END=23785116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr2 23785117 . C . PASS END=23785117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 23785118 . C . PASS END=23785118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 23785119 . G . PASS END=23785119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 23785120 . C . PASS END=23785122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 23785123 . C . PASS END=23785123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 23785124 . G . PASS END=23785126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 23785127 . T . PASS END=23785127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr2 23785128 . G . PASS END=23785141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:12,0 chr2 23785142 . A . PASS END=23785142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 23785143 . C . PASS END=23785164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr2 23785165 . C . PASS END=23785167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr2 23785168 . T . PASS END=23785168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr2 23785169 . G . PASS END=23785174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 23785175 . T . PASS END=23785175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr2 23785176 . C . PASS END=23785200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr2 23785201 . C . PASS END=23785201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 23785202 . A . PASS END=23785208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,272:0,24,255:8,0 chr2 23785209 . G . PASS END=23785209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr2 23785210 . C . PASS END=23785220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,243:6,0 chr2 23785221 . G . LowGQ END=23785221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:3,0 chr2 23785222 . C . PASS END=23785230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr2 23785231 . G . PASS END=23785231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 23785232 . C . PASS END=23785235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 23785236 . C . PASS END=23785323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr2 23785324 . C . PASS END=23785341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr2 23785342 . C . PASS END=23785351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,178:3,0 chr2 23862009 . G . PASS END=23862028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,826:0,64,255:25,0 chr2 23862029 . G . PASS END=23862029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 23862030 . G . PASS END=23862031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 23862032 . C . PASS END=23862046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1133:0,84,255:30,0 chr2 23862047 . A . PASS END=23862047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 23862048 . C . PASS END=23862128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1178:0,82,255:37,0 chr2 23862129 . A . PASS END=23862129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:27,0 chr2 23862130 . T . PASS END=23862132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 23862133 . G . PASS END=23862141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,903:0,67,255:26,0 chr2 23862142 . A . PASS END=23862142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr2 23862143 . C . PASS END=23862149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,925:0,78,255:26,0 chr2 23862150 . G . PASS END=23862150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 23865208 . G . PASS END=23865212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr2 23865213 . G . PASS END=23865220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 23865221 . G . PASS END=23865222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 23865223 . T . PASS END=23865259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:13,0 chr2 23865260 . T C, 48.65 PASS DP=13;MQ=242.76;MQRankSum=2.927;ReadPosRankSum=0.978;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,5,0:0.385,0.000:13:4,2,0:4,3,0:47:83,0,50,179,257,436:155,0,249:6,0:4.8651e+01,8.1024e-05,5.3000e+01,1.7884e+02,2.9208e+02,4.3899e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,4,1:7,1,3,2 chr2 23865261 . G . PASS END=23865265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 23865266 . C . PASS END=23865281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,607:0,48,255:17,0 chr2 23865282 . C . PASS END=23865282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr2 23865283 . A . PASS END=23865297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr2 23865298 . G . PASS END=23865322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,613:0,51,255:19,0 chr2 23865323 . G . PASS END=23865359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,764:0,62,255:25,0 chr2 23865360 . G . PASS END=23865361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 23865362 . G . PASS END=23865371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,743:0,60,255:20,0 chr2 23865372 . C . PASS END=23865372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr2 23865373 . C . PASS END=23865378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:22,0 chr2 23865379 . T . PASS END=23865379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 23865380 . G . PASS END=23865383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:24,0 chr2 23865384 . G . PASS END=23865384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:23,0 chr2 23865385 . G . PASS END=23865386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 23865387 . C . PASS END=23865387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 23865388 . A . PASS END=23865404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,978:0,75,255:26,0 chr2 23865405 . C . PASS END=23865405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 23865406 . C . PASS END=23865429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,976:0,65,255:26,0 chr2 23865430 . T . PASS END=23865430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 23865431 . G . PASS END=23865447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr2 23865448 . C . PASS END=23865448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 23865449 . C . PASS END=23865462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,68,255:25,0 chr2 23865463 . C . PASS END=23865463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:21,0 chr2 23865464 . C . PASS END=23865480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,900:0,61,255:24,0 chr2 23865481 . C . PASS END=23865481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr2 23865482 . C . PASS END=23865483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:23:0,55,800:0,55,255:19,0 chr2 23865484 . T . PASS END=23865484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 23865485 . G . PASS END=23865487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr2 23865488 . C . PASS END=23865489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:21,0 chr2 23865490 . C . PASS END=23865491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:22,0 chr2 23865492 . C . PASS END=23865492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 23865493 . T . PASS END=23865493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr2 23865494 . G . PASS END=23865494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 23865495 . C . PASS END=23865495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr2 23865496 . C . PASS END=23865496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 23865497 . C . PASS END=23865497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 23865498 . G . PASS END=23865498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 23865499 . G . PASS END=23865500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr2 23865501 . G . PASS END=23865501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 23865502 . T . PASS END=23865503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr2 23865504 . G . PASS END=23865506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 23865507 . C . PASS END=23865508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:24,0 chr2 23865509 . G . PASS END=23865509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 23865510 . G . PASS END=23865510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr2 23865511 . T . PASS END=23865513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 23865514 . C . PASS END=23865514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,837:0,36,255:21,0 chr2 23865515 . C . PASS END=23865516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 23865517 . G . PASS END=23865517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:24,0 chr2 23865518 . C . PASS END=23865518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 23865519 . C . PASS END=23865519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:23,0 chr2 23865520 . C . PASS END=23865520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 23865521 . A . PASS END=23865521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:21,0 chr2 23865522 . G . PASS END=23865522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,884:0,29,255:21,0 chr2 23865523 . G . PASS END=23865523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:22,0 chr2 23865524 . A . PASS END=23865524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 23865525 . C . PASS END=23865527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:23,0 chr2 23865528 . A . PASS END=23865528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,828:0,9,255:21,0 chr2 23865529 . C . PASS END=23865531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,872:0,42,255:24,0 chr2 23865532 . C . PASS END=23865535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,840:0,39,255:25,0 chr2 23865536 . G . PASS END=23865537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:24,0 chr2 23865538 . G . PASS END=23865541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,841:0,39,255:25,0 chr2 23865542 . C . PASS END=23865553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 23865554 . A . PASS END=23865554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,799:0,45,255:23,0 chr2 23865555 . G . PASS END=23865563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,893:0,61,255:25,0 chr2 23865564 . C . PASS END=23865565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 23865566 . G . PASS END=23865586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:25,0 chr2 23865587 . G . PASS END=23865587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 23865588 . C . PASS END=23865589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 23865590 . G . PASS END=23865591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 23865592 . C . PASS END=23865594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,833:0,61,255:24,0 chr2 23865595 . C . PASS END=23865595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,815:0,45,255:23,0 chr2 23865596 . C . PASS END=23865614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,886:0,64,255:26,0 chr2 23865615 . C . PASS END=23865615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 23865616 . C . PASS END=23865616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 23865617 . T . PASS END=23865620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 23865621 . A . PASS END=23865631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 23865632 . C . PASS END=23865634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 23865635 . C . PASS END=23865635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 23865636 . A . PASS END=23865642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr2 23865643 . A . PASS END=23865643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:28,0 chr2 23865644 . C . PASS END=23865647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 23865648 . G . PASS END=23865648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:26,0 chr2 23865649 . C . PASS END=23865653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 23865654 . G . PASS END=23865654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 23865655 . G . PASS END=23865656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 23865657 . C . PASS END=23865657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 23865658 . T . PASS END=23865658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 23865659 . G . PASS END=23865659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 23865660 . C . PASS END=23865667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 23865668 . G . PASS END=23865668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 23865669 . C . PASS END=23865679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 23865680 . C . PASS END=23865680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 23865681 . G . PASS END=23865681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 23865682 . T . PASS END=23865682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr2 23865683 . G . PASS END=23865687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 23865688 . A . PASS END=23865688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 23865689 . G . PASS END=23865691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 23865692 . T . PASS END=23865693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 23865694 . A . PASS END=23865696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 23865697 . T . PASS END=23865697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,910:0,70,255:27,0 chr2 23865698 . C . PASS END=23865706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 23865707 . G . PASS END=23865720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,68,255:26,0 chr2 23867953 . A . PASS END=23867974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:78:0,120,1800:0,220,255:40,0 chr2 23907269 . A . PASS END=23907407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:39:0,96,1360:0,100,255:40,0 chr2 23913985 . T C, 48.83 PASS DP=45;MQ=250.00;MQRankSum=5.699;ReadPosRankSum=2.273;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,20,0:0.444,0.000:45:11,11,0:14,9,0:47:84,0,50,679,878,1557:255,0,255:25,0:4.8832e+01,7.8694e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,13,7:14,11,14,6 chr2 23913986 . C . PASS END=23913990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,119,1615:0,119,255:40,0 chr2 23914544 . G . PASS END=23914547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:17,0 chr2 23914548 . G . PASS END=23914579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:24,0 chr2 23914580 . G . PASS END=23914580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 23914581 . C . PASS END=23914581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 23914582 . T . PASS END=23914605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:31,0 chr2 23914606 . A . PASS END=23914606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 23914607 . G . PASS END=23914616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 23914617 . C . PASS END=23914618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 23914619 . G . PASS END=23914634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 23914635 . T . PASS END=23914655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:73:26:0,73,1000:0,73,255:27,0 chr2 23914656 . G . PASS END=23914670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr2 23914671 . A . PASS END=23914677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,74,255:25,0 chr2 23914678 . A . PASS END=23914678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,978:0,38,255:23,0 chr2 23914679 . G . PASS END=23914680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,79,255:25,0 chr2 23914681 . C . PASS END=23914692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 23914693 . C . PASS END=23914697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1055:0,74,255:26,0 chr2 23914698 . A . PASS END=23914699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 23914700 . C . PASS END=23914700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1014:0,35,255:24,0 chr2 23914701 . A . PASS END=23914725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,853:0,64,255:25,0 chr2 23914726 . A . PASS END=23914727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr2 23914728 . G . PASS END=23914738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 23914739 . C . PASS END=23914741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,738:0,63,255:21,0 chr2 23914742 . T . PASS END=23914742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,602:0,13,255:17,0 chr2 23914743 . C . PASS END=23914743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 23914744 . T . PASS END=23914746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 23916139 . A . PASS END=23916181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,47:0,6,47:3,0 chr2 23916182 . G . PASS END=23916203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 23916204 . G . PASS END=23916206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:9,0 chr2 23916207 . C . PASS END=23916223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 23916224 . G . PASS END=23916243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:18,0 chr2 23916244 . T . PASS END=23916254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 23916255 . G . PASS END=23916255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr2 23916256 . C . PASS END=23916268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 23916269 . G . PASS END=23916280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 23916281 . C . PASS END=23916315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,651:0,65,255:22,0 chr2 23916316 . A . PASS END=23916316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 23916317 . C . PASS END=23916323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 23916324 . A . PASS END=23916324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 23916325 . A . PASS END=23916342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:21,0 chr2 23916343 . T . PASS END=23916365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr2 23916366 . T . PASS END=23916366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 23916367 . G . PASS END=23916377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 23916378 . G . PASS END=23916394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 23916395 . A . PASS END=23916398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:14:0,26,405:0,26,255:9,0 chr2 23918493 . T . PASS END=23918503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1101:0,90,255:30,0 chr2 23918504 . G . PASS END=23918508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 23918509 . T . PASS END=23918509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,2 chr2 23918510 . G . PASS END=23918510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1008:0,24,255:26,2 chr2 23918511 . G . PASS END=23918511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr2 23918512 . C . PASS END=23918512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 23918513 . C . PASS END=23918514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 23918515 . T . PASS END=23918515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1029:0,60,255:28,0 chr2 23918516 . G . PASS END=23918523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1021:0,90,255:31,0 chr2 23918524 . T . PASS END=23918524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 23918525 . C . PASS END=23918553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1119:0,80,255:33,0 chr2 23918554 . A . PASS END=23918555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr2 23918556 . G . PASS END=23918559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 23918560 . T . PASS END=23918560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,896:0,73,255:28,0 chr2 23918561 . T . PASS END=23918564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 23918565 . A . PASS END=23918565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:28,0 chr2 23918566 . A . PASS END=23918578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1086:0,90,255:30,0 chr2 23918579 . C . PASS END=23918601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1023:0,71,255:26,0 chr2 23918602 . A . PASS END=23918607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 23918608 . T . PASS END=23918608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:25,0 chr2 23918609 . G . PASS END=23918610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 23918611 . A . PASS END=23918611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr2 23918612 . C . PASS END=23918615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 23918616 . G . PASS END=23918619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,978:0,67,255:25,0 chr2 23918620 . A . PASS END=23918620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,878:0,29,255:24,0 chr2 23918621 . A . PASS END=23918645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,897:0,62,255:26,0 chr2 23918646 . C . PASS END=23918646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 23918647 . G . PASS END=23918647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr2 23918648 . C . PASS END=23918660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 23918661 . A . PASS END=23918691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,852:0,61,255:26,0 chr2 23918821 . G . PASS END=23918821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 23918822 . T . PASS END=23918822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr2 23918823 . G . PASS END=23918851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,845:0,66,255:26,0 chr2 23918852 . C . PASS END=23918853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 23918854 . G . PASS END=23918855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 23918856 . C . PASS END=23918865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr2 23918866 . G . PASS END=23918866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 23918867 . G . PASS END=23918965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1210:0,89,255:35,0 chr2 23918966 . C . PASS END=23918968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 23918969 . T . PASS END=23918972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 23918973 . G . PASS END=23918985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,925:0,63,255:26,0 chr2 23918986 . A . PASS END=23918986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 23918987 . C . PASS END=23918993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr2 23918994 . T . PASS END=23918994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 23918995 . A . PASS END=23918995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 23918996 . C . PASS END=23918996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 23918997 . C . PASS END=23918999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 23919000 . T . PASS END=23919000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 23919001 . C . PASS END=23919003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 23919203 . G . PASS END=23919210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,941:0,78,255:26,0 chr2 23919211 . G . PASS END=23919320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1111:0,84,255:40,0 chr2 23919321 . C . PASS END=23919321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr2 23919322 . G . PASS END=23919337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1250:0,91,255:35,0 chr2 23919338 . C . PASS END=23919349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:31,0 chr2 23919350 . T . PASS END=23919350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,975:0,57,255:30,0 chr2 23919351 . T . PASS END=23919360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 23919361 . G . PASS END=23919361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 23919362 . G . PASS END=23919363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 23919364 . A . PASS END=23919374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 23919375 . C T, 47.94 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=1.085;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:7,5,0:10,7,0:47:83,0,50,400,592,992:255,0,255:15,0:4.7943e+01,9.1378e-05,5.3000e+01,4.0030e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,2,10:11,6,5,7 chr2 23919376 . G . PASS END=23919377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:24,0 chr2 23919378 . G . PASS END=23919384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:26:0,42,630:0,78,255:15,0 chr2 23919385 . T . PASS END=23919387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:39:25:0,39,585:0,58,255:13,0 chr2 23926056 . G . PASS END=23926059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 23926060 . G . PASS END=23926060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 23926061 . A . PASS END=23926061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 23926062 . C . PASS END=23926062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 23926063 . A . PASS END=23926076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,665:0,60,255:24,0 chr2 23926077 . A . PASS END=23926077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:23,0 chr2 23926078 . T . PASS END=23926078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,801:0,72,255:24,0 chr2 23926079 . G . PASS END=23926079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 23926080 . G . PASS END=23926080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 23926081 . G . PASS END=23926081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 23926082 . A . PASS END=23926089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 23926090 . G . PASS END=23926090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 23926091 . C . PASS END=23926094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 23926095 . T . PASS END=23926095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,815:0,41,255:21,0 chr2 23926096 . C . PASS END=23926097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 23926098 . G . PASS END=23926098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 23926099 . C . PASS END=23926102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 23926103 . A . PASS END=23926103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:21,0 chr2 23926104 . G . PASS END=23926109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr2 23926110 . A . PASS END=23926110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:25,0 chr2 23926111 . C . PASS END=23926112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr2 23926113 . C . PASS END=23926113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 23926114 . T . PASS END=23926114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 23926115 . C . PASS END=23926119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 23926120 . G . PASS END=23926120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 23926121 . C . PASS END=23926140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:33,0 chr2 23926141 . A . PASS END=23926141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:32,0 chr2 23926142 . A . PASS END=23926143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 23926144 . A . PASS END=23926144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:34,0 chr2 23926145 . T . PASS END=23926246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1079:0,82,255:35,0 chr2 23926247 . T . PASS END=23926249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 23926589 . A . PASS END=23926596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr2 23926597 . T . PASS END=23926597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr2 23926598 . A . PASS END=23926612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,864:0,69,255:26,0 chr2 23926613 . C . PASS END=23926621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr2 23926622 . G . PASS END=23926634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 23926635 . C . PASS END=23926653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1008:0,68,255:26,0 chr2 23926654 . A . PASS END=23926654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:22,0 chr2 23926655 . G . PASS END=23926658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 23926659 . T C, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.468;ReadPosRankSum=3.409;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:8,10,0:5,5,0:47:85,0,47,185,185,185:255,0,255:12,0:5.0000e+01,9.0084e-05,4.9686e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,8,4,11:4,9,9,6 chr2 23926660 . A . PASS END=23926696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,917:0,71,255:26,0 chr2 23926697 . C . PASS END=23926697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,809:0,48,255:24,0 chr2 23926698 . G . PASS END=23926716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,862:0,61,255:26,0 chr2 23926717 . T . PASS END=23926717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,705:0,36,255:18,0 chr2 23926718 . C . PASS END=23926719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 23926720 . C . PASS END=23926729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:20:0,53,810:0,53,255:19,0 chr2 23926730 . G . PASS END=23926730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr2 23926731 . C . PASS END=23926733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 23929351 . T . PASS END=23929351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 23929352 . G . PASS END=23929372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,942:0,81,255:31,0 chr2 23929373 . A . PASS END=23929373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr2 23929374 . T . PASS END=23929389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1111:0,80,255:32,0 chr2 23929390 . T . PASS END=23929390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:30,0 chr2 23929391 . A . PASS END=23929483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,89,255:40,0 chr2 23929484 . G . PASS END=23929499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:24:0,63,990:0,63,255:26,0 chr2 23929500 . G . PASS END=23929500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 23929501 . C . PASS END=23929509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 23929510 . A . PASS END=23929510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr2 23929511 . A . PASS END=23929512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:25,0 chr2 23929513 . G . PASS END=23929513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 23929514 . A . PASS END=23929530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:25,0 chr2 23929531 . C . PASS END=23929531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 23929532 . T . PASS END=23929533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 23929534 . A . PASS END=23929534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 23958336 . T . PASS END=23958494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:39:0,80,1341:0,80,255:40,0 chr2 23974916 . T . PASS END=23974957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:70:0,120,1800:0,194,255:40,0 chr2 23977049 . C . PASS END=23977177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,120,1800:0,125,255:40,0 chr2 23977517 . C . PASS END=23977644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:36:0,87,1222:0,91,255:40,0 chr2 23980288 . C . PASS END=23980620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:35:0,87,1244:0,87,255:40,0 chr2 23980621 . T . PASS END=23980621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:38,0 chr2 23980622 . G . PASS END=23980971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:42:0,111,1596:0,111,255:40,0 chr2 23985079 . A . PASS END=23985216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:41:0,99,1485:0,113,255:40,0 chr2 23988376 . C . PASS END=23988477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:44:0,81,1215:0,103,255:40,0 chr2 23988478 . C . PASS END=23988488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,77,255:26,0 chr2 23988489 . A . PASS END=23988493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 23988494 . T . PASS END=23988495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,862:0,64,255:26,0 chr2 23988496 . T . PASS END=23988496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 23988497 . A . PASS END=23988498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 23994313 . T . PASS END=23994327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,151,255:40,0 chr2 23996729 . C . PASS END=23996805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:47:0,111,1665:0,141,255:40,0 chr2 24000830 . T . PASS END=24000858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:85:0,120,1800:0,228,255:40,0 chr2 24005739 . C . PASS END=24005893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:46:0,102,1530:0,138,255:40,1 chr2 24005894 . G . PASS END=24005898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:72:42:0,72,1080:0,126,255:26,0 chr2 24008897 . C . PASS END=24008899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:30,0 chr2 24008900 . T . PASS END=24009064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1127:0,84,255:40,0 chr2 24009065 . A . PASS END=24009065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 24009066 . A . PASS END=24009071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 24009072 . A . PASS END=24009088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,67,255:26,0 chr2 24009089 . A . PASS END=24009093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:15,0 chr2 24011382 . C . PASS END=24011517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:44:0,108,1620:0,118,255:40,0 chr2 24021008 . C . PASS END=24021193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:85:34:0,85,1172:0,85,255:40,0 chr2 24022846 . T . PASS END=24022863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,179,255:40,0 chr2 24024314 . C . PASS END=24024326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,193,255:40,0 chr2 24024327 . T . PASS END=24024367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,168,255:40,0 chr2 24029063 . T . PASS END=24029098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:88:0,120,1800:0,241,255:40,0 chr2 24032017 . T . PASS END=24032046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:91:0,120,1800:0,233,255:40,0 chr2 24033186 . C . PASS END=24033327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1177:0,80,255:40,0 chr2 24033328 . A . PASS END=24033335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,80,255:26,0 chr2 24033336 . G . PASS END=24033337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 24033338 . G . PASS END=24033349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:26,0 chr2 24033350 . A . PASS END=24033350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 24033351 . G . PASS END=24033352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr2 24033353 . T . PASS END=24033362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:19,0 chr2 24033363 . A . PASS END=24033368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 24033369 . T . PASS END=24033369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 24033370 . G . PASS END=24033372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 24039524 . T . PASS END=24039590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:57:0,120,1800:0,171,255:40,0 chr2 24042617 . A . PASS END=24042752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:44:0,102,1279:0,102,255:40,0 chr2 24046128 . C . PASS END=24046388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:38:0,84,1244:0,84,255:40,0 chr2 24046389 . C . PASS END=24046425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1351:0,84,255:40,0 chr2 24046426 . G A, 48.46 PASS DP=33;MQ=250.00;MQRankSum=4.826;ReadPosRankSum=2.859;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,14,0:0.424,0.000:33:8,4,0:11,10,0:47:83,0,50,485,651,1135:255,0,255:18,0:4.8461e+01,8.3612e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,13,5,9:9,10,7,7 chr2 24046427 . G . PASS END=24046437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1194:0,83,255:31,0 chr2 24046438 . G . PASS END=24046439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 24051719 . C . PASS END=24051809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:37:0,96,1440:0,97,255:40,0 chr2 24055078 . C . PASS END=24055086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1211:0,102,255:34,0 chr2 24055087 . T . PASS END=24055087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1193:0,55,255:32,0 chr2 24055088 . G . PASS END=24055095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1127:0,85,255:34,0 chr2 24055096 . A . PASS END=24055119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1118:0,85,255:34,0 chr2 24056789 . C . PASS END=24056938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:39:0,83,1260:0,83,255:40,0 chr2 24056939 . T . PASS END=24056943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:60:37:0,60,900:0,111,255:21,0 chr2 24056944 . T . PASS END=24056948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:57:29:0,57,855:0,87,255:19,0 chr2 24080285 . C . PASS END=24080373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,99,1485:0,114,255:40,0 chr2 24086251 . C . PASS END=24086414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:30:0,81,1215:0,90,255:40,0 chr2 24086415 . A . PASS END=24086425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:26,0 chr2 24087679 . C . PASS END=24087726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:67:0,120,1800:0,183,255:40,0 chr2 24087727 . G . PASS END=24087763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,133,255:40,0 chr2 24087764 . G . PASS END=24087764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,9:69:20:69:0,20,1730:0,20,255:40,0 chr2 24087765 . G . PASS END=24087794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:48:0,111,1665:0,130,255:40,0 chr2 24090705 . T . PASS END=24090816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:48:0,120,1800:0,131,255:40,0 chr2 24092533 . C . PASS END=24092631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:55:0,120,1800:0,131,255:40,0 chr2 24098699 . C . PASS END=24098774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:59:0,120,1800:0,145,255:40,0 chr2 24103509 . C . PASS END=24103625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:80:36:0,80,1497:0,80,255:40,0 chr2 24106464 . C . PASS END=24106505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:89:0,120,1800:0,252,255:40,0 chr2 24107635 . C . PASS END=24107743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:68:0,120,1800:0,194,255:40,0 chr2 24108597 . A . PASS END=24108614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1109:0,87,255:40,0 chr2 24108615 . C . PASS END=24108651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,104,1615:0,104,255:40,0 chr2 24108652 . T C, 196.10 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,33,0:0,17,0:146:234,149,0,1841,149,1841:255,150,0:0,0:1.9610e+02,1.4610e+02,0.0000e+00,4.5000e+02,1.8087e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,29:0,0,28,22 chr2 24108653 . G . PASS END=24108689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,102,1530:0,105,255:40,0 chr2 24108690 . T . PASS END=24108699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1233:0,86,255:34,0 chr2 24110702 . C . PASS END=24110849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:39:0,90,1288:0,90,255:40,0 chr2 24110850 . G . PASS END=24110851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr2 24110852 . A . PASS END=24110852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr2 24110853 . G . PASS END=24110855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:26,0 chr2 24111220 . A . PASS END=24111269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:85:0,120,1800:0,208,255:40,0 chr2 24118689 . C . PASS END=24118821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:40:0,81,1215:0,89,255:40,0 chr2 24118822 . T . PASS END=24118822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:26,0 chr2 24118823 . A . PASS END=24118825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 24118826 . A . PASS END=24118836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr2 24118837 . C . PASS END=24118838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 24118839 . T . PASS END=24118840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 24149425 . C . PASS END=24149443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr2 24149444 . A . PASS END=24149444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 24149445 . C . PASS END=24149447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 24149448 . C . PASS END=24149448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 24149449 . G . PASS END=24149449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 24149450 . G . PASS END=24149454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 24149455 . A . PASS END=24149455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 24149456 . C . PASS END=24149457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 24149458 . G . PASS END=24149458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 24149459 . C . PASS END=24149469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr2 24149470 . T . PASS END=24149470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:14,0 chr2 24149471 . T . PASS END=24149471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,409:0,31,255:15,0 chr2 24149472 . T . PASS END=24149490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:16,0 chr2 24149491 . G . PASS END=24149491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 24149492 . G . PASS END=24149498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:18,0 chr2 24149499 . T . PASS END=24149499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,529:0,15,255:17,0 chr2 24149500 . C . PASS END=24149506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 24149507 . G . PASS END=24149507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 24149508 . A . PASS END=24149525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:17:0,47,690:0,47,255:19,0 chr2 24149526 . T . PASS END=24149537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr2 24149538 . T . PASS END=24149538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 24149539 . G . PASS END=24149553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 24149554 . A . PASS END=24149555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,820:0,53,255:19,0 chr2 24149556 . G . PASS END=24149556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 24149557 . C . PASS END=24149571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,729:0,47,255:19,0 chr2 24149572 . A . PASS END=24149583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 24149584 . G . PASS END=24149584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 24149585 . G . PASS END=24149589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 24149590 . A . PASS END=24149590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 24149591 . G . PASS END=24149594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 24149595 . A . PASS END=24149595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 24149596 . C . PASS END=24149598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 24149599 . G . PASS END=24149599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 24149600 . G . PASS END=24149607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 24149608 . A . PASS END=24149640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr2 24181185 . A . PASS END=24181225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:85:0,120,1800:0,233,255:40,0 chr2 24194146 . G . PASS END=24194276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:40:0,87,1307:0,87,255:40,0 chr2 24194277 . A . PASS END=24194282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1388:0,98,255:34,0 chr2 24194283 . A . PASS END=24194283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:31,0 chr2 24194284 . G . PASS END=24194284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 24199839 . G . PASS END=24199945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:43:0,102,1501:0,102,255:40,0 chr2 24205766 . G . PASS END=24205766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 24205767 . G . PASS END=24205767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:76:54:0,76,1853:0,76,255:40,0 chr2 24205768 . A . PASS END=24205903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,117,1755:0,129,255:40,0 chr2 24207543 . T . PASS END=24207563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:36:0,87,1302:0,87,255:38,0 chr2 24207564 . T . PASS END=24207564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,2 chr2 24207565 . A . PASS END=24207565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1373:0,51,255:38,2 chr2 24207566 . A . PASS END=24207566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:39,0 chr2 24207567 . A . PASS END=24207686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:36:0,94,1252:0,94,255:40,0 chr2 24207687 . T . PASS END=24207687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1279:0,64,255:32,0 chr2 24207688 . A . PASS END=24207691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 24207692 . T . PASS END=24207701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,89,255:26,0 chr2 24222525 . T . PASS END=24222683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:34:0,81,1202:0,86,255:40,0 chr2 24222684 . A . PASS END=24222704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:24:0,63,945:0,72,255:23,0 chr2 24222705 . A . PASS END=24222705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:22,0 chr2 24222706 . C . PASS END=24222712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,831:0,69,255:24,0 chr2 24222713 . T . PASS END=24222713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:18,0 chr2 24222714 . T . PASS END=24222714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,815:0,41,255:19,0 chr2 24222715 . T . PASS END=24222717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 24222718 . G . PASS END=24222737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,637:0,40,255:18,0 chr2 24232967 . A . PASS END=24232968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 24232969 . G . LowGQ END=24232969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 24232970 . G . PASS END=24232972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 24232973 . G . LowGQ END=24232973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 24232974 . C . PASS END=24232993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr2 24232994 . A . PASS END=24232995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:5,0 chr2 24232996 . G . PASS END=24233021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,188:6,0 chr2 24233022 . C . PASS END=24233033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr2 24233034 . G . LowGQ END=24233034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:7,0,217:6,0 chr2 24233035 . C . PASS END=24233048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:7,0 chr2 24233049 . A . PASS END=24233049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 24233050 . G . PASS END=24233050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 24233051 . C . PASS END=24233062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 24236155 . G . PASS END=24236169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1070:0,87,255:31,0 chr2 24236170 . C . PASS END=24236170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 24236171 . G . PASS END=24236175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 24236176 . T . PASS END=24236176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr2 24236177 . C . PASS END=24236280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1139:0,86,255:36,0 chr2 24239026 . A . PASS END=24239044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:19,0 chr2 24239045 . C . PASS END=24239047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 24239048 . T . PASS END=24239048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 24239049 . T . PASS END=24239054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr2 24239055 . G . PASS END=24239055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr2 24239056 . T . PASS END=24239062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 24239063 . G . PASS END=24239063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 24239064 . A . PASS END=24239084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:23,0 chr2 24239085 . T . PASS END=24239086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 24239087 . A . PASS END=24239089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 24239090 . C . PASS END=24239090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 24239091 . T . PASS END=24239110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr2 24239111 . A . PASS END=24239111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,776:0,41,255:23,0 chr2 24239112 . C . PASS END=24239123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 24239124 . G . PASS END=24239124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 24239125 . A . PASS END=24239126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 24239127 . A . PASS END=24239148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,630:0,45,255:17,0 chr2 24239149 . T . PASS END=24239150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 24239715 . G . PASS END=24239715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 24239716 . G . PASS END=24239725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:19,0 chr2 24239726 . G . PASS END=24239727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 24239728 . A . PASS END=24239728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr2 24239729 . C . PASS END=24239729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 24239730 . C . PASS END=24239734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,747:0,60,255:21,0 chr2 24239735 . T . PASS END=24239735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 24239736 . C . PASS END=24239745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 24239746 . G . PASS END=24239746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 24239747 . C . PASS END=24239751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 24239752 . T . PASS END=24239752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr2 24239753 . T . PASS END=24239755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 24239756 . T . PASS END=24239756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 24239757 . C . PASS END=24239838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:24,0 chr2 24240156 . T . PASS END=24240166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,458:0,36,255:13,0 chr2 24240167 . G . PASS END=24240176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr2 24240177 . G . PASS END=24240202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:35,0 chr2 24240203 . C . PASS END=24240203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr2 24240204 . C . PASS END=24240272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1094:0,86,255:36,0 chr2 24240273 . C . PASS END=24240283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 24240284 . A . PASS END=24240304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:32,0 chr2 24240305 . C . PASS END=24240305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 24240306 . T . PASS END=24240430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1147:0,80,255:37,0 chr2 24240431 . G . PASS END=24240431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 24240432 . G . PASS END=24240437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 24240438 . G . PASS END=24240438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:28,0 chr2 24240439 . T . PASS END=24240441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 24240442 . C . PASS END=24240456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,65,255:25,0 chr2 24240457 . C . PASS END=24240457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr2 24240458 . A . PASS END=24240458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 24241105 . G . PASS END=24241105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 24241106 . C . PASS END=24241106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 24241107 . C . PASS END=24241121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr2 24241122 . A . PASS END=24241136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr2 24241137 . C . PASS END=24241148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 24241149 . G . PASS END=24241166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 24241167 . C . PASS END=24241167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,787:0,39,255:25,0 chr2 24241168 . C . PASS END=24241171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,925:0,78,255:26,0 chr2 24241172 . A . PASS END=24241172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr2 24241173 . C . PASS END=24241174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 24241175 . T . PASS END=24241193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:31,0 chr2 24241194 . T . PASS END=24241194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 24241195 . G . PASS END=24241238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1185:0,80,255:31,0 chr2 24241239 . A . PASS END=24241270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 24241271 . G . PASS END=24241278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 24242872 . G . PASS END=24242878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 24242879 . A . PASS END=24242879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,819:0,50,255:25,0 chr2 24242880 . G . PASS END=24242899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr2 24242900 . G . PASS END=24242900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 24242901 . T . PASS END=24242910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 24242911 . T . PASS END=24242911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 24242912 . C . PASS END=24242924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1094:0,90,255:30,0 chr2 24242925 . C . PASS END=24242930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr2 24242931 . C . PASS END=24242931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 24242932 . C . PASS END=24242965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr2 24242966 . C . PASS END=24242966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 24242967 . T . PASS END=24242970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 24242971 . G . PASS END=24242989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:17:0,48,659:0,51,255:19,0 chr2 24242990 . T . PASS END=24242990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 24242991 . T . PASS END=24243011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 24243012 . T . PASS END=24243012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 24243013 . G . PASS END=24243013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 24243014 . T . PASS END=24243030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:11:0,33,396:0,33,255:14,0 chr2 24244518 . G . PASS END=24244530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,875:0,81,255:27,0 chr2 24244531 . G . PASS END=24244531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 24244532 . C . PASS END=24244543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,981:0,87,255:30,0 chr2 24244544 . C . PASS END=24244544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 24244545 . G . PASS END=24244547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 24244548 . G . PASS END=24244548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 24244549 . T . PASS END=24244556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1177:0,80,255:30,0 chr2 24244557 . A . PASS END=24244557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 24244558 . C . PASS END=24244559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 24244560 . T . PASS END=24244560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:27,0 chr2 24244561 . A . PASS END=24244562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 24244563 . C . PASS END=24244563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 24244564 . C . PASS END=24244564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 24244565 . C . PASS END=24244565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr2 24244566 . G . PASS END=24244569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 24244570 . G . PASS END=24244571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1025:0,73,255:27,0 chr2 24244572 . A . PASS END=24244573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 24244574 . C . PASS END=24244575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr2 24244576 . G . PASS END=24244580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 24244581 . C . PASS END=24244582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 24244583 . G . PASS END=24244589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 24244590 . G . PASS END=24244590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 24244591 . G . PASS END=24244591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 24244592 . G . PASS END=24244592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr2 24244593 . G . PASS END=24244599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 24244600 . A . PASS END=24244600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:27,0 chr2 24244601 . G . PASS END=24244601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 24244602 . C . PASS END=24244608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr2 24244719 . A . PASS END=24244748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1440:0,102,255:36,0 chr2 24244749 . T . PASS END=24244749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr2 24244750 . G . PASS END=24244819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1299:0,93,255:40,0 chr2 24244820 . T . PASS END=24244820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:34,0 chr2 24244821 . T . PASS END=24244840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1265:0,92,255:36,0 chr2 24245303 . G . PASS END=24245310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr2 24245311 . G . PASS END=24245386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1049:0,80,255:40,0 chr2 24245692 . G . PASS END=24245696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:25,0 chr2 24245697 . A . PASS END=24245697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 24245698 . G . PASS END=24245702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,976:0,78,255:26,0 chr2 24245703 . G . PASS END=24245729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:30,0 chr2 24245730 . T . PASS END=24245730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:28,0 chr2 24245731 . C . PASS END=24245772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1035:0,80,255:32,0 chr2 24246000 . G . PASS END=24246091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1189:0,84,255:39,0 chr2 24246092 . G . PASS END=24246092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:28,0 chr2 24246093 . T . PASS END=24246099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:31,0 chr2 24246100 . T . PASS END=24246100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr2 24246101 . G . PASS END=24246108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 24246109 . G . PASS END=24246109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 24246453 . G . PASS END=24246459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 24246460 . C . PASS END=24246478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr2 24246479 . A . PASS END=24246479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr2 24246480 . C . PASS END=24246507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,551:0,41,255:18,0 chr2 24246508 . G . PASS END=24246516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 24246517 . A . PASS END=24246517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 24246518 . C . PASS END=24246527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 24246528 . C . PASS END=24246551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,590:0,41,255:17,0 chr2 24246552 . G . PASS END=24246552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 24246553 . C . PASS END=24246556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,560:0,51,255:17,0 chr2 24246557 . C . PASS END=24246557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 24246558 . T . PASS END=24246591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 24246592 . C . PASS END=24246596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 24246965 . G . PASS END=24246967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr2 24246968 . C . PASS END=24246998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr2 24246999 . G . PASS END=24246999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr2 24247000 . C . PASS END=24247001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 24247002 . G . PASS END=24247005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 24247006 . A . PASS END=24247006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 24247007 . G . PASS END=24247016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 24247017 . A . PASS END=24247017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 24247018 . C . PASS END=24247044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1350:0,99,255:34,0 chr2 24247045 . C . PASS END=24247045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:33,0 chr2 24247046 . C . PASS END=24247071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:35,0 chr2 24247072 . G . PASS END=24247072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 24247073 . C . PASS END=24247111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:34,0 chr2 24247112 . G . PASS END=24247133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:25,0 chr2 24247134 . C . PASS END=24247134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 24247135 . T . PASS END=24247145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 24248302 . G . PASS END=24248323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 24248324 . T . PASS END=24248326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 24253803 . T . PASS END=24253890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:27:0,81,980:0,81,255:36,0 chr2 24253891 . G . PASS END=24253891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1120:0,78,255:31,0 chr2 24253892 . C . PASS END=24253910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:36,0 chr2 24253911 . A . PASS END=24253911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:33,0 chr2 24253912 . G . PASS END=24253926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1150:0,88,255:34,0 chr2 24253927 . T . PASS END=24253932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,99,255:26,0 chr2 24253933 . C . PASS END=24253935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,92,255:27,0 chr2 24253936 . G . PASS END=24253936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 24253937 . A . PASS END=24253945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 24253946 . C . PASS END=24253991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:26,0 chr2 24253992 . A . PASS END=24254005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,49,255:19,0 chr2 24254006 . C . PASS END=24254029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,33,255:13,0 chr2 24254030 . A . PASS END=24254032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 24255699 . C . PASS END=24255802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1350:0,98,255:40,0 chr2 24255803 . A . PASS END=24255816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:61:26:0,61,893:0,61,255:26,0 chr2 24256037 . G . PASS END=24256052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,162,255:40,0 chr2 24260511 . T . PASS END=24260754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1215:0,86,255:40,0 chr2 24260755 . A . PASS END=24260757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 24260758 . G . PASS END=24260759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr2 24260760 . G . PASS END=24260778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,71,255:26,0 chr2 24260779 . C . PASS END=24260784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 24260785 . T . PASS END=24260785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr2 24260786 . G . PASS END=24260787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 24260788 . C . PASS END=24260795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 24260796 . C . PASS END=24261796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1111:0,81,255:40,1 chr2 24261797 . T . PASS END=24261797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1197:0,69,255:32,0 chr2 24261798 . C . PASS END=24262047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1200:0,83,255:40,0 chr2 24262048 . C . PASS END=24262049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 24262050 . A . PASS END=24262104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1125:0,82,255:34,0 chr2 24262105 . A . PASS END=24262118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr2 24262119 . C . PASS END=24262131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 24262132 . G . PASS END=24262133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 24262134 . G . PASS END=24262136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 24262137 . T . PASS END=24262138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 24262139 . G . PASS END=24262147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1117:0,80,255:31,0 chr2 24262148 . T . PASS END=24262148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr2 24262149 . A . PASS END=24262152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 24262153 . T . PASS END=24262153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 24262154 . C . PASS END=24262317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:32:0,87,1231:0,90,255:40,0 chr2 24262318 . A . PASS END=24262318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:28,0 chr2 24262319 . A . PASS END=24262324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1335:0,95,255:32,0 chr2 24262325 . T . PASS END=24262343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,922:0,60,255:25,0 chr2 24262344 . T . PASS END=24262344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:21,0 chr2 24262345 . T . PASS END=24262352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 24262353 . T . PASS END=24262353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 24262354 . C . PASS END=24262356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 24262357 . A . PASS END=24262357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 24262358 . A . PASS END=24262364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:20,0 chr2 24272720 . A . PASS END=24272720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1178:0,86,255:33,0 chr2 24272721 . T . PASS END=24272721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1058:0,46,255:32,0 chr2 24272722 . G . PASS END=24272741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:34:0,88,1182:0,88,255:37,0 chr2 24272742 . T . PASS END=24272742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,1067:0,28,255:29,0 chr2 24272743 . C . PASS END=24272743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 24272744 . T . PASS END=24272744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1190:0,64,255:33,0 chr2 24272745 . C . PASS END=24272753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1286:0,92,255:34,0 chr2 24272754 . A . PASS END=24272754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1018:0,58,255:30,0 chr2 24272755 . C . PASS END=24272756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:33,0 chr2 24276772 . G . PASS END=24276805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,86,255:36,0 chr2 24276806 . G . PASS END=24276811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,99,255:26,0 chr2 24276812 . C . PASS END=24276816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:29:0,57,855:0,74,255:19,0 chr2 24276817 . C . PASS END=24276818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:20,0 chr2 24276819 . G . PASS END=24276819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 24276974 . C . PASS END=24277012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1110:0,80,255:35,0 chr2 24277013 . A . PASS END=24277013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1043:0,74,255:32,0 chr2 24277014 . C . PASS END=24277061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1213:0,83,255:37,0 chr2 24277062 . G . PASS END=24277062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 24283684 . G . PASS END=24283796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:41:0,96,1440:0,123,255:40,0 chr2 24285889 . C . PASS END=24285895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 24285896 . C . PASS END=24285906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 24285907 . C . PASS END=24285931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:17,0 chr2 24285932 . A . PASS END=24285932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 24285933 . G . PASS END=24285947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr2 24285948 . G . PASS END=24285977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,823:0,66,255:26,0 chr2 24285978 . G . PASS END=24285990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 24285991 . A . PASS END=24285998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 24285999 . C . PASS END=24286008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1033:0,87,255:29,0 chr2 24286009 . A . PASS END=24286009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 24286010 . T . PASS END=24286010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 24286011 . C . PASS END=24286013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 24286014 . T . PASS END=24286017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 24286018 . A . PASS END=24286018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 24286019 . A . PASS END=24286020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 24286021 . G . PASS END=24286021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 24286022 . C . PASS END=24286030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 24286031 . T . PASS END=24286031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,894:0,54,255:25,0 chr2 24286032 . C . PASS END=24286033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 24286034 . T . PASS END=24286062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:22:0,61,884:0,61,255:26,0 chr2 24286574 . G . PASS END=24286652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:42:0,120,1800:0,126,255:40,0 chr2 24288258 . A . PASS END=24288283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,158,255:40,0 chr2 24290632 . T . PASS END=24290721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,165,255:40,0 chr2 24291191 . C . PASS END=24291325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1215:0,81,255:40,0 chr2 24291326 . C . PASS END=24291329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr2 24296946 . A . PASS END=24297064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:68:0,120,1800:0,195,255:40,0 chr2 24299070 . G . PASS END=24299099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:42:0,98,1347:0,98,255:40,0 chr2 24300449 . T . PASS END=24300449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 24300450 . C . PASS END=24300450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:21,0 chr2 24300451 . A . PASS END=24300452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 24300453 . T . LowGQ END=24300453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,665:8,0,255:20,0 chr2 24300454 . G . PASS END=24300454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 24300455 . G . PASS END=24300457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 24300458 . C . PASS END=24300459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,786:0,41,255:23,0 chr2 24300460 . G . PASS END=24300461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 24300462 . T . PASS END=24300462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 24300463 . C . PASS END=24300463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,928:0,37,255:26,0 chr2 24300464 . C . PASS END=24300467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr2 24300468 . A . PASS END=24300468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr2 24300469 . C . PASS END=24300485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:32:0,88,1210:0,88,255:36,0 chr2 24300486 . T . PASS END=24300486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:35,0 chr2 24300487 . T . PASS END=24300631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:80:37:0,80,1320:0,80,255:40,0 chr2 24302314 . C . PASS END=24302315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 24302316 . T . PASS END=24302316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr2 24302317 . A . PASS END=24302337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:33,0 chr2 24302338 . A . PASS END=24302338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,945:0,71,255:32,0 chr2 24302339 . C . PASS END=24302476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,94,255:40,0 chr2 24302477 . C . PASS END=24302499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr2 24302500 . A . PASS END=24302510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:48:25:0,48,720:0,59,255:19,0 chr2 24303642 . T . PASS END=24303851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:36:0,93,1395:0,104,255:40,0 chr2 24303852 . A . PASS END=24303862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:32:0,63,945:0,92,255:26,0 chr2 24303863 . C . PASS END=24303863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:20,0 chr2 24303864 . T . PASS END=24303871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:21,0 chr2 24303872 . T . PASS END=24303887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 24303888 . A . PASS END=24303888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 24303889 . G . PASS END=24303899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 24303900 . T . PASS END=24303900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:15,0 chr2 24303901 . C . PASS END=24303901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 24305755 . C . PASS END=24305766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,837:0,63,255:22,0 chr2 24305767 . A . PASS END=24305767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 24305768 . C . PASS END=24305769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 24305770 . G . PASS END=24305770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 24305771 . C . PASS END=24305837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:26,0 chr2 24305838 . G . PASS END=24305838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr2 24305839 . G . PASS END=24305860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr2 24305861 . A . PASS END=24305861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 24305862 . G . PASS END=24305901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr2 24305902 . T . PASS END=24305915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:19:0,57,684:0,57,255:19,0 chr2 24305916 . A . PASS END=24305955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,677:0,60,255:22,0 chr2 24305956 . C . PASS END=24305972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr2 24305973 . A . PASS END=24305973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,635:0,18,255:15,0 chr2 24305974 . G . PASS END=24305979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr2 24305980 . A . PASS END=24305980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr2 24305981 . A . PASS END=24305987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 24305988 . C . PASS END=24305988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 24305989 . T . PASS END=24306008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr2 24306009 . T . PASS END=24306009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 24306010 . A . PASS END=24306019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr2 24306020 . T . PASS END=24306020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr2 24306021 . C . PASS END=24306022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 24307059 . C . PASS END=24307066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:19,0 chr2 24307067 . A . PASS END=24307107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:26,0 chr2 24307108 . A . PASS END=24307169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:31,0 chr2 24307170 . C . PASS END=24307170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 24307171 . G . PASS END=24307178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 24307179 . A . PASS END=24307189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr2 24307190 . C . PASS END=24307196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,62,255:18,0 chr2 24338453 . T . PASS END=24338481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:70:0,120,1800:0,192,255:40,0 chr2 24342447 . C . PASS END=24342467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,116,1597:0,116,255:40,0 chr2 24342468 . C . PASS END=24342504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,126,255:40,0 chr2 24342505 . T C, 50.00 PASS DP=59;MQ=250.00;MQRankSum=6.512;ReadPosRankSum=0.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,34,0:0.576,0.000:59:12,17,0:13,17,0:47:85,0,48,1200,884,2084:255,0,255:24,0:5.0000e+01,7.8176e-05,5.0968e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,16,18:13,12,19,15 chr2 24342506 . A . PASS END=24342542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,117,1755:0,117,255:40,0 chr2 24342543 . C . PASS END=24342552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,108,1535:0,110,255:39,0 chr2 24344033 . A . PASS END=24344059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:39,0 chr2 24344060 . T G, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=3.557;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:8,8,0:9,15,0:47:85,0,48,820,608,1428:255,0,255:17,0:5.0000e+01,7.7659e-05,5.1041e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,14,9:6,11,15,8 chr2 24344061 . G . PASS END=24344097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,119,1681:0,119,255:40,0 chr2 24344098 . G . PASS END=24344170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,117,1755:0,128,255:40,0 chr2 24345289 . A . PASS END=24345405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:36:0,92,1286:0,92,255:40,0 chr2 24347232 . A . PASS END=24347330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:38:0,85,1421:0,85,255:40,0 chr2 24357989 . G . PASS END=24358057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,188,255:40,0 chr2 24360779 . G . PASS END=24360970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:34:0,85,1111:0,85,255:40,0 chr2 24362240 . G . PASS END=24362320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:72:0,120,1800:0,195,255:40,0 chr2 24369618 . G . PASS END=24369636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:70:0,120,1800:0,181,255:40,0 chr2 24369637 . A . PASS END=24369673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,200,255:40,0 chr2 24369674 . C T, 263.23 PASS DP=72;MQ=249.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,39,0:0,33,0:213:301,216,0,2737,216,2737:255,216,0:0,0:2.6323e+02,2.1323e+02,0.0000e+00,4.5000e+02,2.4800e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,37:0,0,34,38 chr2 24369675 . G . PASS END=24369705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:58:0,120,1800:0,174,255:40,0 chr2 24369800 . G . PASS END=24369956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:95:45:0,95,1576:0,95,255:40,0 chr2 24384376 . G . PASS END=24384386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,144,255:40,0 chr2 24384387 . A . PASS END=24384423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,167,255:40,0 chr2 24384424 . T C, 269.25 PASS DP=74;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,74,0:1.000,0.000:74:0,35,0:0,39,0:219:307,222,0,2814,222,2814:255,223,0:0,0:2.6925e+02,2.1925e+02,0.0000e+00,4.5000e+02,2.5402e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,39:0,0,38,36 chr2 24384425 . T . PASS END=24384461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,191,255:40,0 chr2 24384462 . A . PASS END=24384483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,188,255:40,0 chr2 24387068 . A . PASS END=24387070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 24387071 . C . PASS END=24387085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,886:0,65,255:26,0 chr2 24387086 . T . PASS END=24387086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr2 24387087 . C . PASS END=24387087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr2 24387088 . T . PASS END=24387090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 24387091 . A . PASS END=24387091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:25,0 chr2 24387092 . A . PASS END=24387092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 24387093 . A . PASS END=24387094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,903:0,81,255:29,0 chr2 24387095 . A . PASS END=24387095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:27,0 chr2 24387096 . G . PASS END=24387096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr2 24387097 . A . PASS END=24387097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:28,0 chr2 24387098 . A . PASS END=24387128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1089:0,80,255:34,0 chr2 24387129 . A . PASS END=24387135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:36:0,66,990:0,97,255:26,0 chr2 24387136 . A . PASS END=24387142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:38:0,60,900:0,114,255:21,0 chr2 24387143 . C . PASS END=24387152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:42:38:0,42,630:0,98,255:18,0 chr2 24387153 . G . PASS END=24387155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:39:38:0,39,585:0,98,255:13,0 chr2 24387156 . T . PASS END=24387167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:21:37:0,21,315:0,59,255:9,0 chr2 24387168 . T . PASS END=24387168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:15:38:0,15,225:0,114,255:5,0 chr2 24387169 . T . PASS END=24387177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:3:38:0,3,45:0,75,255:1,0 chr2 24387178 . G GC,GT, 156.72 PASS DP=38;MQ=250.00;FractionInformativeReads=0.974 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,1,0:0.973,0.027,0.000:37:0,20,0,0:0,16,1,0:98:189,110,0,1317,73,152,1324,108,1315,1320:255,6,0:0,55:1.5672e+02,1.0672e+02,0.0000e+00,4.5000e+02,9.8600e+01,1.5160e+02,4.5000e+02,1.4010e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,29.00,58.00,32.00,34.77,63.77,63.77,37.77:0,0,15,22:0,0,20,17 chr2 24387179 . C . LowGQ END=24387179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,35:37:0:37:0,0,0:255,34,0:30,1 chr2 24387180 . A . PASS END=24387191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1194:0,83,255:32,0 chr2 24387192 . A . PASS END=24387198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 24387199 . G . PASS END=24387200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1194:0,83,255:27,0 chr2 24387201 . A . PASS END=24387204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,80,255:25,0 chr2 24388242 . G . PASS END=24388281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:41:0,120,1800:0,123,255:40,0 chr2 24390496 . G . PASS END=24390516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:63:0,120,1800:0,146,255:40,0 chr2 24390517 . G A, 50.00 PASS DP=66;MQ=249.55;MQRankSum=6.973;ReadPosRankSum=3.894;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,34,0:0.515,0.000:66:16,16,0:16,18,0:48:85,0,50,1206,1087,2293:255,0,255:29,0:5.0000e+01,6.5751e-05,5.2884e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,16,20,14:20,12,20,14 chr2 24390518 . C . PASS END=24390538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,173,255:40,0 chr2 24392225 . G . PASS END=24392261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,140,255:40,0 chr2 24398350 . A . PASS END=24398408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:41:0,90,1426:0,90,255:40,0 chr2 24398409 . A . PASS END=24398442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:39:0,96,1440:0,115,255:40,0 chr2 24400671 . G . PASS END=24400731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,174,255:40,0 chr2 24400732 . T . PASS END=24400739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 24401980 . A . PASS END=24402076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:32:0,90,1350:0,96,255:40,0 chr2 24402077 . A . PASS END=24402096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:50:0,81,1215:0,107,255:40,0 chr2 24402097 . G . PASS END=24402101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:63:50:0,63,945:0,150,255:26,0 chr2 24402102 . T . PASS END=24402103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:42:50:0,42,630:0,112,255:15,0 chr2 24402104 . C . PASS END=24402114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:33:44:0,33,495:0,99,255:13,0 chr2 24402115 . C . PASS END=24402115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:21:44:0,21,315:0,116,255:7,0 chr2 24402116 . T . PASS END=24402116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:18:44:0,18,270:0,132,255:6,0 chr2 24402117 . T . LowGQ END=24402126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:44,0:44:0:43:0,0,0:0,90,255:0,0 chr2 24402127 . C CAA, 170.39 PASS DP=42;MQ=250.00;FractionInformativeReads=0.976 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,23,0:0,18,0:120:202,123,0,1845,123,1845:255,16,0:0,65:1.7039e+02,1.2039e+02,0.0000e+00,4.5000e+02,1.5519e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,16,25:0,0,22,19 chr2 24402128 . G . LowGQ END=24402128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,43:43:0:43:0,0,0:255,129,0:33,0 chr2 24402129 . A . PASS END=24402131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:82:43:0,82,1395:0,82,255:32,0 chr2 24402132 . A . PASS END=24402132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1336:0,57,255:31,0 chr2 24402133 . T . PASS END=24402133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:81:43:0,81,1361:0,81,255:32,0 chr2 24402134 . G . PASS END=24402134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1458:0,74,255:32,0 chr2 24402135 . T . PASS END=24402135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,99,1485:0,112,255:32,0 chr2 24402136 . T . PASS END=24402137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:33,0 chr2 24402138 . A . PASS END=24402138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:39:0,96,1440:0,101,255:32,0 chr2 24406154 . G . PASS END=24406241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,114,1710:0,123,255:40,0 chr2 24406364 . G . PASS END=24406366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 24406367 . A . PASS END=24406367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:23,0 chr2 24406368 . A . PASS END=24406394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr2 24406395 . A . PASS END=24406395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 24406396 . A . PASS END=24406400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 24406401 . G . PASS END=24406402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 24406403 . A . PASS END=24406412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:34,0 chr2 24406413 . G . PASS END=24406413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 24406414 . C . PASS END=24406461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:32:0,90,1196:0,96,255:37,0 chr2 24406462 . A . PASS END=24406462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 24406463 . A . PASS END=24406498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1133:0,90,255:32,0 chr2 24406499 . A . PASS END=24406499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 24406500 . A . PASS END=24406505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1072:0,87,255:29,0 chr2 24406506 . C . PASS END=24406514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 24413281 . T . PASS END=24413281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 24413282 . C . PASS END=24413289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:26,0 chr2 24413290 . G . PASS END=24413297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 24413298 . A G, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=1.880;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,18,0:0.562,0.000:32:5,9,0:9,9,0:48:85,0,49,643,501,1144:255,0,255:14,0:5.0000e+01,7.1446e-05,5.1909e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,15,3:6,8,8,10 chr2 24413299 . T . PASS END=24413310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1149:0,82,255:33,0 chr2 24413311 . A . PASS END=24413311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:32,0 chr2 24413312 . C . PASS END=24413317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:34:0,92,1183:0,92,255:37,0 chr2 24413318 . A . PASS END=24413318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr2 24413319 . G . PASS END=24413335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1221:0,82,255:40,0 chr2 24413336 . G . PASS END=24413476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1215:0,85,255:40,0 chr2 24413477 . C . PASS END=24413496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:23:0,69,779:0,69,255:24,0 chr2 24413497 . A . PASS END=24413497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 24413498 . T . PASS END=24413498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 24413499 . G . PASS END=24413499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr2 24413500 . A . PASS END=24413500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 24423449 . G . PASS END=24423485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr2 24423486 . C . PASS END=24423486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 24423487 . T . PASS END=24423511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 24423512 . G . PASS END=24423512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 24423513 . G . PASS END=24423515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr2 24423516 . C . PASS END=24423516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 24423517 . C . PASS END=24423543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,415:0,36,255:13,0 chr2 24423544 . A . PASS END=24423544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr2 24423545 . G . PASS END=24423550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 24423551 . G . PASS END=24423551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr2 24423552 . T . PASS END=24423574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr2 24423575 . C . PASS END=24423601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:9,0 chr2 24423602 . C . PASS END=24423608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 24423609 . A . PASS END=24423610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr2 24423611 . T . PASS END=24423613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr2 24426495 . C . PASS END=24426507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,901:0,78,255:26,0 chr2 24426508 . T . PASS END=24426513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 24426514 . T . PASS END=24426526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 24426527 . G . PASS END=24426608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:32:0,80,1137:0,80,255:40,0 chr2 24426609 . T . PASS END=24426609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 24426610 . G . PASS END=24426645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1260:0,89,255:35,0 chr2 24426646 . A . PASS END=24426647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1025:0,41,255:29,0 chr2 24426648 . G . PASS END=24426648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 24426649 . A . PASS END=24426650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:29,0 chr2 24426651 . A . PASS END=24426652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 24427114 . C . PASS END=24427115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 24427116 . T . PASS END=24427116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 24427117 . C . PASS END=24427118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 24427119 . G . PASS END=24427272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:27:0,80,972:0,80,255:40,0 chr2 24427273 . A . PASS END=24427274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 24427275 . G . PASS END=24427277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 24427278 . T . PASS END=24427287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:25,0 chr2 24428083 . C . PASS END=24428166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:40:0,93,1354:0,93,255:40,2 chr2 24429116 . T . PASS END=24429144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,132,255:40,0 chr2 24431106 . C . PASS END=24431146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,100,1623:0,100,255:40,0 chr2 24431147 . T . PASS END=24431183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:39:0,94,1435:0,94,255:40,0 chr2 24431184 . C T, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=3.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,20,0:0.513,0.000:39:11,11,0:8,9,0:48:85,0,50,687,680,1366:255,0,255:17,0:5.0000e+01,6.5233e-05,5.2969e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,6,14:13,6,7,13 chr2 24431185 . G . PASS END=24431188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:37,0 chr2 24431969 . C . PASS END=24431971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 24431972 . T . PASS END=24431986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,740:0,63,255:23,0 chr2 24431987 . G . PASS END=24431987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 24431988 . T . PASS END=24431994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:24,0 chr2 24431995 . G . PASS END=24431995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr2 24431996 . G . PASS END=24432003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1236:0,105,255:36,0 chr2 24432004 . C . PASS END=24432004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1175:0,69,255:35,0 chr2 24432005 . C . PASS END=24432009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1299:0,92,255:36,0 chr2 24432010 . A . PASS END=24432010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1186:0,61,255:32,0 chr2 24432011 . A . PASS END=24432012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 24432013 . G . PASS END=24432013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:34,0 chr2 24432014 . T . PASS END=24432053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1333:0,95,255:38,0 chr2 24432054 . T . PASS END=24432054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1260:0,72,255:34,0 chr2 24432055 . G . PASS END=24432090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1164:0,83,255:34,0 chr2 24432687 . C . PASS END=24432704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,120,1800:0,122,255:40,0 chr2 24432705 . T . PASS END=24432801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,101,1397:0,101,255:40,0 chr2 24432802 . A . PASS END=24432838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:40:0,90,1439:0,90,255:39,0 chr2 24432839 . A G, 43.99 PASS DP=43;MQ=250.00;MQRankSum=5.415;ReadPosRankSum=1.269;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,16,0:0.372,0.000:43:15,9,0:12,7,0:43:79,0,50,542,950,1491:255,0,255:25,0:4.3985e+01,1.9518e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,19,5,11:12,15,10,6 chr2 24432840 . T . PASS END=24432876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1294:0,92,255:39,0 chr2 24432877 . T . PASS END=24432890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,902:0,81,255:33,0 chr2 24432891 . G . PASS END=24432891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:30,0 chr2 24432892 . A . PASS END=24432897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:31,0 chr2 24432898 . A . PASS END=24432898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:29,0 chr2 24432899 . G . PASS END=24432899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 24432900 . T . PASS END=24432902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr2 24433649 . C . PASS END=24433804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1066:0,85,255:40,0 chr2 24433805 . G . PASS END=24433816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr2 24435519 . A . PASS END=24435603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,95,255:40,0 chr2 24435604 . T . PASS END=24435617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:27:0,75,1125:0,81,255:26,0 chr2 24438918 . C . PASS END=24438929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 24438930 . T . PASS END=24438930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 24438931 . T . PASS END=24438934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 24438935 . A . PASS END=24438935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:16,0 chr2 24438936 . A . PASS END=24438941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr2 24438942 . G . PASS END=24438962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:24,0 chr2 24438963 . T . PASS END=24438963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 24438964 . A . PASS END=24438964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 24438965 . A . PASS END=24438966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 24438967 . A . PASS END=24438967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 24438968 . G . PASS END=24439063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1147:0,80,255:35,0 chr2 24439064 . T . PASS END=24439064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:30,0 chr2 24439065 . C . PASS END=24439066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 24439067 . T . PASS END=24439067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr2 24439068 . C . PASS END=24439074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 24439075 . C . PASS END=24439075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 24439076 . C . PASS END=24439079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 24439080 . C . PASS END=24439089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:28:0,77,1116:0,77,255:26,0 chr2 24439090 . A . PASS END=24439101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:23:0,51,765:0,69,255:19,0 chr2 24440776 . T . PASS END=24440882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,107,1512:0,107,255:40,0 chr2 24443763 . T . PASS END=24443919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:29:0,84,1260:0,87,255:40,0 chr2 24443920 . T . PASS END=24443935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr2 24465074 . T . PASS END=24465075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,186,255:40,0 chr2 24468998 . A . PASS END=24469189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:43:0,99,1485:0,119,255:40,0 chr2 24469666 . C . PASS END=24469667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1335:0,108,255:36,0 chr2 24469668 . G . PASS END=24469668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:35,0 chr2 24469669 . G . PASS END=24469762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:37:0,101,1298:0,101,255:40,0 chr2 24471498 . C . PASS END=24471619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,116,1501:0,116,255:40,0 chr2 24471706 . C . PASS END=24471743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:39:0,97,1426:0,97,255:40,0 chr2 24471744 . C . PASS END=24471744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1379:0,62,255:33,0 chr2 24471745 . C . PASS END=24471751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1349:0,98,255:36,0 chr2 24475214 . C . PASS END=24475222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1088:0,84,255:30,0 chr2 24475223 . C . PASS END=24475223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 24475224 . T . PASS END=24475242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1282:0,80,255:40,0 chr2 24475243 . A . PASS END=24475380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,99,1485:0,111,255:40,0 chr2 24477236 . C . PASS END=24477300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:71:0,120,1800:0,203,255:40,0 chr2 24480757 . T . PASS END=24480962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:88:34:0,88,1181:0,88,255:40,0 chr2 24483975 . C . PASS END=24483989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,994:0,81,255:36,0 chr2 24483990 . T . PASS END=24483990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:35,0 chr2 24483991 . G . PASS END=24484112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:97:37:0,97,1335:0,97,255:40,0 chr2 24484113 . A . PASS END=24484119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,102,1530:0,114,255:37,0 chr2 24484430 . T . PASS END=24484611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,158,255:40,0 chr2 24486153 . T . PASS END=24486203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,140,255:40,0 chr2 24493540 . C . PASS END=24493573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:98:49:0,98,1510:0,98,255:40,0 chr2 24493574 . T . PASS END=24493574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:79:63:0,79,2092:0,79,255:40,0 chr2 24493575 . C . PASS END=24493637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,108,1620:0,113,255:40,0 chr2 24494635 . G . PASS END=24494690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:67:0,120,1800:0,183,255:40,0 chr2 24494691 . T . PASS END=24494741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,1:126:99:120:0,120,1800:0,255,255:40,3 chr2 24494742 . T . LowGQ END=24494742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,37:121:0:121:0,0,2150:255,0,255:40,0 chr2 24494743 . T . PASS END=24494745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,13:119:99:118:0,120,1800:0,125,255:40,0 chr2 24494746 . G . LowGQ END=24494746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,27:118:0:118:0,0,2601:225,0,255:40,0 chr2 24494747 . T . PASS END=24494751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,1:117:99:113:0,120,1800:0,255,255:40,0 chr2 24494752 . C . LowGQ END=24494752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,32:111:0:111:0,0,2344:255,0,255:40,0 chr2 24494753 . T . PASS END=24494754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,5:113:99:111:0,120,1800:0,255,255:40,0 chr2 24494755 . C . LowGQ END=24494755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,27:111:0:111:0,0,2631:173,0,255:40,0 chr2 24494756 . T . PASS END=24494757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,2:110:99:108:0,120,1800:0,255,255:40,0 chr2 24494758 . C . LowGQ END=24494758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,28:108:0:108:0,0,2502:255,0,255:40,0 chr2 24494759 . C . PASS END=24494759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,16:108:44:108:0,44,3013:0,44,255:40,0 chr2 24494760 . T . PASS END=24494760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,7:107:99:107:0,120,1800:0,204,255:40,0 chr2 24494761 . C . LowGQ END=24494761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,18:107:0:107:0,0,2721:14,0,255:40,0 chr2 24494762 . C . PASS END=24494762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,7:106:99:106:0,120,1800:0,202,255:40,0 chr2 24494763 . T . LowGQ END=24494763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,22:104:0:104:0,0,2464:170,0,255:40,0 chr2 24494764 . T . PASS END=24494765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,3:99:99:99:0,120,1800:0,230,255:40,0 chr2 24494766 . C . LowGQ END=24494766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,21:97:0:97:0,0,2400:130,0,255:40,0 chr2 24494767 . T . PASS END=24494769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:95:0,120,1800:0,238,255:40,0 chr2 24494770 . G . LowGQ END=24494770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,19:96:0:96:0,0,2502:55,0,255:40,0 chr2 24494771 . A . PASS END=24494771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,6:95:99:95:0,120,1800:0,135,255:40,0 chr2 24494772 . T . PASS END=24494772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,9:93:65:93:0,65,2819:0,65,255:40,0 chr2 24494773 . T . PASS END=24494775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,2:92:99:92:0,120,1800:0,191,255:40,0 chr2 24494776 . C . LowGQ END=24494776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,17:93:0:93:0,0,2496:103,0,255:40,0 chr2 24494777 . T . PASS END=24494779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,3:93:99:93:0,120,1800:0,193,255:40,0 chr2 24494780 . C . LowGQ END=24494780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,17:93:0:93:0,0,2466:127,0,255:40,0 chr2 24494781 . C . PASS END=24494782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:94:0,119,1800:0,119,255:40,0 chr2 24494783 . T . LowGQ END=24494783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,12:94:0:94:0,0,2712:56,0,255:40,0 chr2 24494784 . A . PASS END=24494785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,2:94:99:93:0,120,1800:0,227,255:40,0 chr2 24494786 . G . LowGQ END=24494786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,16:93:0:93:0,0,2492:95,0,255:40,0 chr2 24494787 . T . PASS END=24494790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:84:83:0,84,1800:0,84,255:40,0 chr2 24494791 . C . LowGQ END=24494791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,13:83:0:83:0,0,2270:126,0,255:40,0 chr2 24494792 . T . PASS END=24494795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:84:0,120,1800:0,203,255:40,0 chr2 24494796 . C . LowGQ END=24494797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,14:83:0:82:0,0,2242:63,0,255:40,0 chr2 24494798 . T . PASS END=24494798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,9:81:58:81:0,58,2465:0,58,255:40,0 chr2 24494799 . T . PASS END=24494799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:81:0,120,1800:0,226,255:40,0 chr2 24494800 . G . LowGQ END=24494800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,11:81:0:81:0,0,2243:87,0,255:40,0 chr2 24494801 . C . PASS END=24494801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,5:81:99:81:0,120,1800:0,146,255:40,0 chr2 24494802 . T . PASS END=24494804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,135,255:40,0 chr2 24494805 . G . LowGQ END=24494805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,9:79:0:79:0,0,2357:37,0,255:40,0 chr2 24494806 . C . PASS END=24494809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,140,255:40,0 chr2 24494810 . C . PASS END=24494810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,7:72:42:72:0,42,2271:0,42,255:40,0 chr2 24498582 . C . PASS END=24498718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:47:0,108,1620:0,141,255:40,0 chr2 24507632 . C . PASS END=24507708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,164,255:40,0 chr2 24507709 . C . PASS END=24507712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,102,1530:0,150,255:40,0 chr2 24509081 . C . PASS END=24509220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:54:0,120,1800:0,123,255:40,0 chr2 24516557 . C . PASS END=24516644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:82:0,120,1800:0,233,255:40,0 chr2 24518533 . C . PASS END=24518655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:35:0,84,1305:0,84,255:40,2 chr2 24518656 . C . PASS END=24518673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,86,255:26,0 chr2 24521534 . C . PASS END=24521649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:43:0,96,1440:0,101,255:40,0 chr2 24521650 . A . PASS END=24521658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1305:0,89,255:30,0 chr2 24521659 . G . PASS END=24521659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:25,0 chr2 24521660 . T . PASS END=24521660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:26,0 chr2 24521661 . C . PASS END=24521661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:26,0 chr2 24521662 . G . PASS END=24521664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 24521665 . C . PASS END=24521670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,79,255:24,0 chr2 24521671 . C . PASS END=24521680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:23:0,51,765:0,53,255:19,0 chr2 24521681 . T . PASS END=24521681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:16,0 chr2 24521682 . G . PASS END=24521683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:17,0 chr2 24522778 . C . PASS END=24523040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:33:0,81,993:0,81,255:40,0 chr2 24524023 . C . PASS END=24524108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:67:0,120,1800:0,167,255:40,0 chr2 24524834 . C . PASS END=24524834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1566:0,116,255:40,0 chr2 24524835 . T . PASS END=24524835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1383:0,76,255:40,0 chr2 24524836 . G . PASS END=24524920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:45:0,88,1543:0,88,255:40,0 chr2 24524921 . A . PASS END=24524957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:38:0,88,1440:0,88,255:40,0 chr2 24524958 . C T, 46.10 PASS DP=37;MQ=250.00;MQRankSum=4.981;ReadPosRankSum=4.527;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,14,0:0.389,0.000:36:8,4,0:14,10,0:45:81,0,50,485,786,1271:255,0,255:19,0:4.6099e+01,1.2840e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,8,6:12,10,6,8 chr2 24524959 . G . PASS END=24524971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,101,255:31,0 chr2 24526668 . C . PASS END=24526731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:66:0,120,1800:0,198,255:40,0 chr2 24531486 . C . PASS END=24531625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1215:0,90,255:40,0 chr2 24531747 . C . PASS END=24531775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:23,0 chr2 24531776 . T . PASS END=24531816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr2 24531817 . A . PASS END=24531819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 24531820 . T . PASS END=24531821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 24533153 . C . PASS END=24533249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:45:0,120,1800:0,123,255:40,0 chr2 24533358 . T . PASS END=24533550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:29:0,81,1151:0,85,255:40,0 chr2 24533551 . G . PASS END=24533551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 24533552 . C . PASS END=24533556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 24533557 . C . PASS END=24533561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 24535081 . C . PASS END=24535244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:44:0,120,1800:0,132,255:40,0 chr2 24536329 . C . PASS END=24536392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,163,255:40,0 chr2 24538001 . C . PASS END=24538093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:40:0,97,1349:0,97,255:40,0 chr2 24550921 . C . PASS END=24550969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:71:0,120,1800:0,158,255:40,0 chr2 24550973 . G . PASS END=24550984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,199,255:40,0 chr2 24881547 . A . PASS END=24881635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:33:0,86,1305:0,86,255:40,0 chr2 24888618 . C . PASS END=24888784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:41:0,108,1530:0,108,255:40,1 chr2 24896235 . A . PASS END=24896332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,102,1596:0,102,255:40,0 chr2 24905820 . G . PASS END=24905828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:33,0 chr2 24905829 . G . PASS END=24905829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:32,0 chr2 24905830 . G . PASS END=24905889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:35:0,92,1169:0,92,255:40,0 chr2 24905890 . G . PASS END=24905926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,155,255:40,0 chr2 24905927 . G C, 211.61 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,27,0:0,28,0:162:249,165,0,2071,165,2071:255,165,0:0,0:2.1161e+02,1.6161e+02,0.0000e+00,4.5000e+02,1.9638e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,32:0,0,23,32 chr2 24905928 . A . PASS END=24905964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,132,255:40,0 chr2 24905965 . A . PASS END=24905997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:45:0,105,1575:0,128,255:40,0 chr2 24914350 . T . PASS END=24914366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,869:0,69,255:25,0 chr2 24914367 . C . PASS END=24914466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1102:0,87,255:40,0 chr2 24914467 . G . PASS END=24914467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:38,0 chr2 24914468 . T . PASS END=24914490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,92,255:40,0 chr2 24914491 . C . PASS END=24914491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 24914492 . T . PASS END=24914497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 24914498 . A . PASS END=24914498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 24914499 . C . PASS END=24914499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 24914500 . A . PASS END=24914500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1017:0,59,255:27,0 chr2 24914501 . G . PASS END=24914504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 24914505 . A . PASS END=24914505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,982:0,68,255:27,0 chr2 24914506 . A . PASS END=24914508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr2 24914509 . C . PASS END=24914517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:24,0 chr2 24914518 . A . PASS END=24914518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:21,0 chr2 24914519 . G . PASS END=24914526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:23,0 chr2 24914527 . A . PASS END=24914529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 24916121 . A . PASS END=24916216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,149,255:40,0 chr2 24920527 . G . PASS END=24920667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:91:37:0,91,1529:0,91,255:40,0 chr2 24927955 . T . PASS END=24927964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:26,0 chr2 24927965 . T . PASS END=24927968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr2 24927969 . A . PASS END=24927969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 24927970 . C . PASS END=24928067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1215:0,84,255:40,0 chr2 24928068 . C . PASS END=24928068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:31,0 chr2 24928069 . A . PASS END=24928093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:31,0 chr2 24928094 . C . PASS END=24928102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr2 24929437 . G . PASS END=24929439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 24929440 . G . PASS END=24929698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1214:0,84,255:40,0 chr2 24929699 . G . PASS END=24929699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr2 24929700 . C . PASS END=24929718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:34,0 chr2 24929719 . C . PASS END=24929722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr2 24929723 . T . PASS END=24929723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 24929724 . C . PASS END=24929729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:31:0,72,1080:0,80,255:26,0 chr2 24929730 . G . PASS END=24929736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 24929737 . T . PASS END=24929737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 24929738 . C . PASS END=24930321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:29:0,80,1046:0,80,255:40,0 chr2 24930322 . A . PASS END=24930322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:36,0 chr2 24930323 . G . PASS END=24930416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1227:0,84,255:40,0 chr2 24930417 . T . PASS END=24930417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1024:0,36,255:29,0 chr2 24930418 . C . PASS END=24930418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:30,0 chr2 24930419 . T . PASS END=24930428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:31,0 chr2 24930429 . G . PASS END=24930430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:32:0,71,1170:0,71,255:27,0 chr2 24930431 . A . PASS END=24930438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr2 24930439 . A . PASS END=24930439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:26,0 chr2 24930440 . G . PASS END=24930440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 24930441 . A . PASS END=24930448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:31:0,62,1027:0,62,255:26,0 chr2 24930449 . A . PASS END=24930449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr2 24930450 . C . PASS END=24930450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 24930451 . T . PASS END=24930451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,862:0,51,255:23,0 chr2 24930452 . T . PASS END=24930472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,870:0,61,255:25,0 chr2 24930473 . A . PASS END=24930477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr2 24930478 . C . PASS END=24930482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 24930483 . C . PASS END=24930483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr2 24930484 . A . PASS END=24930500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,894:0,64,255:26,0 chr2 24930501 . T . PASS END=24930737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:30:0,80,1125:0,80,255:40,0 chr2 24930738 . A . PASS END=24930738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:28,0 chr2 24930739 . A . PASS END=24930743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 24930744 . A . PASS END=24930744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr2 24930745 . G . PASS END=24930751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 24930752 . A . PASS END=24930752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:26,0 chr2 24930753 . G . PASS END=24930754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 24930755 . C . PASS END=24930756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr2 24930757 . G . PASS END=24930757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:24,0 chr2 24933800 . T . PASS END=24933818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:18,0 chr2 24933819 . A . PASS END=24933828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:23,0 chr2 24933829 . G . PASS END=24933838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:29,0 chr2 24933839 . A . PASS END=24933839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1084:0,63,255:28,0 chr2 24933840 . C . PASS END=24933980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:32:0,90,1260:0,96,255:40,0 chr2 24949458 . G . PASS END=24949575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:38:0,102,1530:0,114,255:40,0 chr2 24951177 . C . PASS END=24951345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:35:0,84,1296:0,84,255:40,0 chr2 24952370 . G . PASS END=24952666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:27:0,80,1000:0,80,255:40,0 chr2 24952667 . T . PASS END=24952671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 24952672 . G . PASS END=24952684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,71,255:26,0 chr2 24962301 . T . PASS END=24962402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:61:0,120,1800:0,183,255:40,0 chr2 24964653 . C . PASS END=24964653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 24964654 . C . PASS END=24964664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 24964665 . G . PASS END=24964686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr2 24964687 . A . PASS END=24964687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 24964688 . G . PASS END=24964713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,808:0,66,255:26,0 chr2 24964714 . G . PASS END=24964719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 24964720 . G . PASS END=24964735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1047:0,71,255:27,0 chr2 24964736 . G . PASS END=24964739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 24964740 . A . PASS END=24964740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr2 24964741 . G . PASS END=24964767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,987:0,84,255:30,0 chr2 24964768 . T . PASS END=24964768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 24964769 . T . PASS END=24964773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 24964774 . A . PASS END=24964775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 24964776 . A . PASS END=24964776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:24,0 chr2 24964777 . A . PASS END=24964782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:26,0 chr2 24964783 . C . PASS END=24964783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 24964784 . T . PASS END=24964784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 24964785 . C . PASS END=24964792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr2 24964793 . T . PASS END=24964793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 24964794 . G . PASS END=24964795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 24964796 . A . PASS END=24964796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 24964797 . C . PASS END=24964808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1072:0,90,255:30,0 chr2 24964809 . A . PASS END=24964809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,955:0,73,255:26,0 chr2 24964810 . T . PASS END=24964810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 24964811 . G . PASS END=24964815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 24964816 . A . PASS END=24964818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 24964819 . C . PASS END=24964825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 24964826 . T . PASS END=24964832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 24964833 . G . PASS END=24964833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 24964834 . G . PASS END=24964860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1148:0,83,255:32,0 chr2 24964861 . C . PASS END=24964861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr2 24964862 . A . PASS END=24965031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:31:0,80,1147:0,80,255:40,0 chr2 24965032 . A . PASS END=24965053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:26,0 chr2 24965054 . A . PASS END=24965054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 24965055 . G . PASS END=24965055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 24974851 . G . PASS END=24974874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,853:0,69,255:25,0 chr2 24974875 . A . PASS END=24974883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr2 24974884 . C . PASS END=24974884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 24974885 . A . PASS END=24974907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:33,0 chr2 24974908 . T . PASS END=24974944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1212:0,92,255:36,0 chr2 24974945 . T G, 154.89 PASS DP=36;MQ=249.78;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,21,0:0,15,0:105:193,108,0,1367,108,1367:255,108,0:0,0:1.5489e+02,1.0489e+02,0.0000e+00,4.5000e+02,1.3966e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,19:0,0,18,18 chr2 24974946 . C . PASS END=24974982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:36:0,80,1110:0,80,255:38,0 chr2 24974983 . C . PASS END=24975004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:33,0 chr2 24975005 . A . PASS END=24975005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 24975006 . G . PASS END=24975015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1180:0,93,255:31,0 chr2 24975016 . G . PASS END=24975016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 24975017 . A . PASS END=24975025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:29,0 chr2 24980842 . T . PASS END=24980857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,513:0,42,255:16,0 chr2 24980858 . G . PASS END=24980862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 24980863 . G . PASS END=24980864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 24980865 . A . PASS END=24980868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 24980869 . G . PASS END=24980873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 24980874 . C . PASS END=24980874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr2 24980875 . G . PASS END=24981007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1119:0,87,255:40,0 chr2 24981008 . A . PASS END=24981025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:25:0,63,945:0,75,255:25,0 chr2 24985556 . A . PASS END=24985645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,106,1421:0,106,255:40,0 chr2 24990948 . G . PASS END=24990978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,91,255:35,0 chr2 24990979 . T . PASS END=24990981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:25,0 chr2 24990982 . C . PASS END=24990987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1215:0,83,255:29,0 chr2 24990988 . A . PASS END=24990992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:32:0,75,1125:0,96,255:25,0 chr2 24991090 . C . PASS END=24991121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,656:0,63,255:22,0 chr2 24991122 . C . PASS END=24991124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 24991125 . G . PASS END=24991150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr2 24991151 . A . PASS END=24991205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1180:0,84,255:32,0 chr2 24991206 . A . PASS END=24991225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr2 24991226 . A . PASS END=24991226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 24991227 . G . PASS END=24991233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 24991234 . C . PASS END=24991234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 24991235 . T . PASS END=24991238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 24991239 . T . PASS END=24991260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,692:0,47,255:19,0 chr2 25013280 . T . PASS END=25013285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:26,0 chr2 25013286 . G . PASS END=25013287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 25013288 . A . PASS END=25013288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,840:0,64,255:26,0 chr2 25013289 . C . PASS END=25013289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 25013290 . A . PASS END=25013290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr2 25013291 . A . PASS END=25013292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr2 25013293 . C . PASS END=25013293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 25013294 . G . PASS END=25013302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 25013303 . T . PASS END=25013309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25013310 . C . PASS END=25013312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25013313 . G . PASS END=25013315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 25013316 . C . PASS END=25013318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 25013319 . T . PASS END=25013319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 25013320 . T . PASS END=25013342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1001:0,87,255:32,0 chr2 25013343 . A . PASS END=25013343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1046:0,69,255:30,0 chr2 25013344 . G . PASS END=25013423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1202:0,87,255:39,0 chr2 25013424 . C . PASS END=25013445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:23:0,60,900:0,62,255:26,0 chr2 25013446 . G . PASS END=25013446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 25013447 . G . PASS END=25013450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 25015995 . C . PASS END=25015995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 25015996 . T . PASS END=25015996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 25015997 . C . PASS END=25015998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 25015999 . A . PASS END=25015999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr2 25016000 . G . PASS END=25016000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 25016001 . G . PASS END=25016008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr2 25016009 . T . PASS END=25016009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr2 25016010 . G . PASS END=25016013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 25016014 . A . PASS END=25016014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 25016015 . T . PASS END=25016025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:18,0 chr2 25016026 . T . PASS END=25016026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 25016027 . C . PASS END=25016027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 25016028 . T . PASS END=25016028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,541:0,2,255:17,0 chr2 25016029 . T . PASS END=25016046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,570:0,40,255:19,0 chr2 25016047 . T . PASS END=25016049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 25016050 . G . PASS END=25016103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr2 25016104 . A . PASS END=25016104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 25016105 . C . PASS END=25016105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 25016106 . C . PASS END=25016106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:15,0 chr2 25016107 . A . PASS END=25016116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 25016117 . C . PASS END=25016117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr2 25016118 . C . PASS END=25016124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr2 25016125 . G . PASS END=25016126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 25016127 . G . PASS END=25016131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 25016132 . G . PASS END=25016132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 25016133 . A . PASS END=25016134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:13,0 chr2 25016135 . C . LowGQ END=25016135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:4,0,255:13,0 chr2 25016136 . T . PASS END=25016138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 25016139 . T . PASS END=25016157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 25016158 . A . PASS END=25016158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 25016159 . C . PASS END=25016161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 25016162 . A . PASS END=25016163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,519:0,31,255:15,0 chr2 25016164 . T . PASS END=25016243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 25016244 . C . PASS END=25016244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr2 25016245 . A . PASS END=25016246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,554:0,40,255:16,0 chr2 25016343 . A . PASS END=25016353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,821:0,66,255:22,0 chr2 25016354 . T . PASS END=25016354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,705:0,49,255:21,0 chr2 25016355 . C . PASS END=25016370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,837:0,66,255:22,0 chr2 25016789 . A . PASS END=25016789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 25016790 . T . PASS END=25016798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 25016799 . C . PASS END=25016799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr2 25016800 . G . PASS END=25016800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 25016801 . A . PASS END=25016834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1108:0,87,255:36,0 chr2 25022544 . G . PASS END=25022564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:19,0 chr2 25022565 . G . PASS END=25022571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:23,0 chr2 25022572 . G . PASS END=25022572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr2 25022573 . A . PASS END=25022573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:22,0 chr2 25022574 . C . PASS END=25022575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 25022576 . C . PASS END=25022576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 25022577 . A . PASS END=25022588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,809:0,69,255:25,0 chr2 25022589 . C . PASS END=25022695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,908:0,81,255:38,0 chr2 25022696 . C . PASS END=25022696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 25022697 . G . PASS END=25022704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 25022705 . C . PASS END=25022713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr2 25037245 . G . PASS END=25037362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:65:0,120,1800:0,143,255:40,0 chr2 25038366 . G . PASS END=25038386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,808:0,62,255:25,0 chr2 25038387 . G . PASS END=25038395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr2 25038396 . T . PASS END=25038396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr2 25038397 . T . PASS END=25038616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:29:0,84,1116:0,87,255:40,0 chr2 25038617 . C . PASS END=25038625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:25,0 chr2 25039515 . A . PASS END=25039634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:34:0,83,1133:0,83,255:40,0 chr2 25039635 . T . PASS END=25039635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1123:0,55,255:26,0 chr2 25039636 . A . PASS END=25039640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,86,255:28,0 chr2 25039641 . G . PASS END=25039673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,68,255:26,0 chr2 25039674 . G . PASS END=25039674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 25039675 . T . PASS END=25039682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 25039683 . C . PASS END=25039686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,52,255:18,0 chr2 25040539 . G . PASS END=25040675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:33:0,89,1211:0,89,255:40,0 chr2 25042801 . T . PASS END=25042806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 25042807 . G . PASS END=25042879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:14:0,40,480:0,40,255:17,0 chr2 25042880 . A . PASS END=25042880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 25042881 . A . PASS END=25042885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,531:0,48,255:16,0 chr2 25042886 . A . PASS END=25042886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr2 25042887 . A . PASS END=25042887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 25042888 . G . PASS END=25042888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr2 25042889 . G . PASS END=25042896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 25042897 . C . PASS END=25042900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 25042901 . C . PASS END=25042910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 25042911 . T . PASS END=25042911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:15,0 chr2 25042912 . C . PASS END=25042914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 25042915 . A . PASS END=25042915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 25042916 . A . PASS END=25042924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 25042925 . C . PASS END=25042925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 25042926 . C . PASS END=25042941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr2 25042942 . G . PASS END=25042942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 25042943 . A . PASS END=25042943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 25042944 . A . PASS END=25042944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 25042945 . G . PASS END=25042953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 25042954 . T . LowGQ END=25042954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,355:16,0,255:11,0 chr2 25042955 . C . PASS END=25042970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr2 25042971 . T . PASS END=25042971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 25042972 . T . PASS END=25042973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,402:0,20,255:9,0 chr2 25042974 . C . PASS END=25042974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,280:0,3,255:7,0 chr2 25042975 . T . PASS END=25042982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 25042983 . C . PASS END=25042983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 25043253 . C . PASS END=25043299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,100,1368:0,100,255:40,0 chr2 25043300 . G . PASS END=25043300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:33,0 chr2 25043301 . A . PASS END=25043316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:34,0 chr2 25043317 . G . PASS END=25043320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 25043593 . C . PASS END=25043640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr2 25043641 . G . PASS END=25043656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:13,0 chr2 25043657 . A . PASS END=25043677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 25043678 . G . PASS END=25043685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,249:5,0 chr2 25043686 . G . PASS END=25043717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr2 25044386 . C . PASS END=25044509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:36:0,96,1440:0,105,255:40,0 chr2 25045380 . C . PASS END=25045380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:25,0 chr2 25045381 . T . PASS END=25045438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1000:0,81,255:36,0 chr2 25045439 . T . PASS END=25045439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:30,0 chr2 25045440 . A . PASS END=25045465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1169:0,80,255:32,0 chr2 25045466 . T . PASS END=25045466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 25045467 . G . PASS END=25045481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 25045482 . C . PASS END=25045499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:26,0 chr2 25046078 . A . PASS END=25046089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:37:0,108,1472:0,110,255:40,0 chr2 25046090 . T C, 49.80 PASS DP=42;MQ=250.00;MQRankSum=5.528;ReadPosRankSum=3.564;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:9,9,0:13,11,0:48:85,0,50,686,750,1436:255,0,255:22,0:4.9801e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,6,13,7:13,9,10,10 chr2 25046091 . G . PASS END=25046127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,115,1505:0,115,255:40,0 chr2 25046128 . C . PASS END=25046224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,120,1800:0,129,255:40,0 chr2 25047247 . C . PASS END=25047249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:31,0 chr2 25047250 . A . PASS END=25047250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 25047251 . T . PASS END=25047252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1094:0,90,255:31,0 chr2 25047253 . T . PASS END=25047253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 25047254 . C . PASS END=25047359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:31:0,80,1050:0,80,255:40,0 chr2 25047360 . G . PASS END=25047360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:37,0 chr2 25047361 . G . PASS END=25047370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1325:0,98,255:37,0 chr2 25047371 . T . PASS END=25047374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1315:0,111,255:37,0 chr2 25047375 . A . PASS END=25047375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:36,0 chr2 25047376 . C . PASS END=25047406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:33:0,80,1242:0,80,255:36,0 chr2 25048914 . G . PASS END=25048998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:40:0,87,1305:0,110,255:40,0 chr2 25050415 . C . PASS END=25050478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:34:0,83,1175:0,83,255:38,0 chr2 25050771 . T . PASS END=25050785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 25050786 . C . PASS END=25050798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr2 25050799 . A . PASS END=25050799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 25050800 . T . PASS END=25050806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 25050807 . A . PASS END=25050807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 25050808 . A . PASS END=25050808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 25050809 . G . PASS END=25050809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 25050810 . A . PASS END=25050810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 25050811 . C . PASS END=25050828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:18,0 chr2 25050829 . G . PASS END=25050884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:21:0,62,778:0,62,255:26,0 chr2 25050885 . T . PASS END=25050888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:27,0 chr2 25050889 . T . PASS END=25050891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 25050892 . C . PASS END=25050892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 25050893 . C . PASS END=25050894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 25050895 . G . PASS END=25050900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 25050901 . G . PASS END=25050901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:28,0 chr2 25050902 . C . PASS END=25050915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 25050916 . T . PASS END=25050916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 25050917 . G . PASS END=25050917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 25050918 . A . PASS END=25050918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:27,0 chr2 25050919 . G . PASS END=25050924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 25050925 . G . PASS END=25050925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr2 25050926 . C . PASS END=25050939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:31,0 chr2 25050940 . T . PASS END=25050967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:31,0 chr2 25050968 . G . PASS END=25050975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:25,0 chr2 25050976 . T . PASS END=25050976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,967:0,54,255:22,0 chr2 25050977 . T C, 47.38 PASS DP=30;MQ=250.00;MQRankSum=4.551;ReadPosRankSum=1.291;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,12,0:0.400,0.000:30:6,5,0:12,7,0:46:82,0,50,429,634,1064:255,0,255:14,0:4.7379e+01,1.0122e-04,5.3000e+01,4.2924e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,4,8:14,4,5,7 chr2 25050978 . T . PASS END=25050978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:22,0 chr2 25050979 . C . PASS END=25050979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 25050980 . C . PASS END=25050982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 25050983 . C . PASS END=25050993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:27,0 chr2 25050994 . C . PASS END=25051014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:25,0 chr2 25051015 . A . PASS END=25051028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:18,0 chr2 25051029 . A . PASS END=25051029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 25051030 . G . PASS END=25051030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 25053578 . C . PASS END=25053581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 25053582 . T . PASS END=25053582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 25053583 . C . PASS END=25053611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,862:0,61,255:26,0 chr2 25053612 . A . PASS END=25053612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,780:0,28,255:23,0 chr2 25053613 . T . PASS END=25053623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,876:0,61,255:26,0 chr2 25053624 . G . PASS END=25053649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 25053650 . C . PASS END=25053650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 25053651 . C . PASS END=25053660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 25053661 . A . PASS END=25053661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 25053662 . A . PASS END=25053668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 25053669 . A . PASS END=25053669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr2 25053670 . A . PASS END=25053671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 25053672 . G . PASS END=25053672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25053673 . C . PASS END=25053677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25053678 . A . PASS END=25053678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 25053679 . G . PASS END=25053679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:23,0 chr2 25053680 . C . PASS END=25053688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,86,255:26,0 chr2 25053689 . A . PASS END=25053694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 25054531 . C . PASS END=25054613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:40:0,88,1168:0,88,255:40,0 chr2 25054614 . T . PASS END=25054614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:36,0 chr2 25054615 . T . PASS END=25054618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1364:0,101,255:34,0 chr2 25057354 . C . PASS END=25057358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 25057359 . G . PASS END=25057373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,413:0,33,255:12,0 chr2 25057374 . G . PASS END=25057388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:18,0 chr2 25057389 . G . PASS END=25057406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 25057407 . G . PASS END=25057408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 25057409 . A . PASS END=25057412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:24,0 chr2 25057413 . G . PASS END=25057413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 25057414 . A . PASS END=25057430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,886:0,72,255:26,0 chr2 25057431 . C . PASS END=25057438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr2 25057439 . T . PASS END=25057439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,901:0,40,255:26,0 chr2 25057440 . C . PASS END=25057445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 25057446 . C . PASS END=25057446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 25057447 . G . PASS END=25057459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr2 25057460 . C . PASS END=25057480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,925:0,64,255:26,0 chr2 25057481 . G . PASS END=25057481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:23,0 chr2 25057482 . C . PASS END=25057484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr2 25057485 . G . PASS END=25057485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:20,0 chr2 25057486 . G . PASS END=25057497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr2 25057498 . G . PASS END=25057515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr2 25057663 . A . PASS END=25057686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr2 25057687 . A . PASS END=25057687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 25057688 . G . PASS END=25057705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr2 25057706 . G . PASS END=25057720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr2 25057721 . C . PASS END=25057721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 25057722 . A . PASS END=25057789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,592:0,48,255:19,0 chr2 25057790 . A . PASS END=25057790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:18,0 chr2 25057791 . T . PASS END=25057796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr2 25057797 . G . PASS END=25057814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 25057815 . A . PASS END=25057815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 25057816 . G . PASS END=25057817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 25057818 . G . PASS END=25057818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 25057819 . A . PASS END=25057835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,870:0,66,255:24,0 chr2 25057836 . C . PASS END=25057836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 25057837 . A . PASS END=25057842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 25057843 . G . PASS END=25057843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 25057844 . A . PASS END=25057844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:19,0 chr2 25057845 . C . PASS END=25057862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,590:0,46,255:18,0 chr2 25059786 . C . PASS END=25059800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1197:0,83,255:35,0 chr2 25059801 . C . PASS END=25059801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr2 25059802 . T . PASS END=25059869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1289:0,89,255:40,0 chr2 25059870 . A . PASS END=25059870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1637:0,64,255:40,0 chr2 25059871 . G . PASS END=25059889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:40:0,81,1306:0,81,255:40,0 chr2 25059890 . A . PASS END=25059890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:34,0 chr2 25059891 . A . PASS END=25059891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 25059892 . G . PASS END=25059894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr2 25059895 . G . PASS END=25059895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1404:0,101,255:35,0 chr2 25059896 . G . PASS END=25059896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:35,0 chr2 25059897 . T . PASS END=25059897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 25059898 . G . PASS END=25059898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:32,0 chr2 25059899 . C . PASS END=25059899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 25059900 . T . PASS END=25059904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:31,0 chr2 25059905 . T . PASS END=25059906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:29,0 chr2 25059907 . G . PASS END=25059914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1125:0,63,255:27,0 chr2 25061314 . C . PASS END=25061326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:32,0 chr2 25061327 . C . PASS END=25061479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1105:0,81,255:40,0 chr2 25061480 . A . PASS END=25061480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr2 25061481 . T . PASS END=25061486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 25061487 . C . PASS END=25061488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1078:0,74,255:26,0 chr2 25061489 . C . PASS END=25061491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 25061716 . T . PASS END=25061749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:41:0,86,1449:0,86,255:40,0 chr2 25061750 . A . PASS END=25061750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1490:0,63,255:36,0 chr2 25061751 . G . PASS END=25061752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,102,1604:0,102,255:39,0 chr2 25061753 . A . PASS END=25061753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1396:0,57,255:36,0 chr2 25061754 . G . PASS END=25061764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1388:0,87,255:38,0 chr2 25061765 . C . PASS END=25061777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1242:0,81,255:34,0 chr2 25061778 . T . PASS END=25061781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:38:0,60,900:0,97,255:25,0 chr2 25062742 . C . PASS END=25062774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr2 25062775 . A . PASS END=25062775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 25062776 . C . PASS END=25062804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr2 25062805 . T . PASS END=25062805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 25062806 . G . PASS END=25062850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr2 25062851 . G . PASS END=25062858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 25062859 . A . PASS END=25062873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 25062874 . C . PASS END=25062874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 25062875 . C . PASS END=25062880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,250:7,0 chr2 25062881 . T . PASS END=25062881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 25062882 . G . PASS END=25062885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 25062886 . T . PASS END=25062888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 25062889 . T . PASS END=25062889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:5,0 chr2 25062890 . C . PASS END=25062900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,210:6,0 chr2 25064128 . G . PASS END=25064132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr2 25064133 . G . PASS END=25064155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1158:0,90,255:33,0 chr2 25064156 . T . PASS END=25064192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1126:0,81,255:37,0 chr2 25064193 . G A, 50.00 PASS DP=38;MQ=249.79;MQRankSum=5.166;ReadPosRankSum=4.709;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,20,0:0.541,0.000:37:11,16,0:6,4,0:48:85,0,49,714,594,1308:255,0,255:15,0:5.0000e+01,6.8081e-05,5.2472e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,9,11:4,13,11,9 chr2 25064194 . G . PASS END=25064230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1194:0,86,255:33,0 chr2 25064231 . T . PASS END=25064237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 25064238 . C . PASS END=25064238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:28,0 chr2 25064239 . C . PASS END=25064243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 25064244 . C . PASS END=25064255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr2 25064425 . A . PASS END=25064448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 25064449 . A . PASS END=25064450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 25064451 . A . PASS END=25064465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:16,0 chr2 25064466 . G . PASS END=25064466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 25064467 . C . PASS END=25064477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,652:0,51,255:19,0 chr2 25064478 . C . PASS END=25064490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:20,0 chr2 25064491 . G . PASS END=25064536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,531:0,40,255:19,0 chr2 25065123 . C . PASS END=25065129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 25065130 . T . PASS END=25065130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:25,0 chr2 25065131 . C . PASS END=25065150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1024:0,80,255:31,0 chr2 25065151 . T . PASS END=25065151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr2 25065152 . G . PASS END=25065175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:32:0,81,1305:0,81,255:39,0 chr2 25065176 . C . PASS END=25065176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:38,0 chr2 25065177 . T . PASS END=25065191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1288:0,81,255:39,0 chr2 25065192 . T . PASS END=25065192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:34,0 chr2 25065193 . T . PASS END=25065238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:31:0,89,1119:0,89,255:36,0 chr2 25065239 . A . PASS END=25065239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:28,0 chr2 25065240 . A . PASS END=25065243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 25065244 . T . PASS END=25065244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1086:0,41,255:24,0 chr2 25065245 . G . PASS END=25065248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:32:0,65,1119:0,65,255:26,0 chr2 25065249 . T . PASS END=25065250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1215:0,83,255:27,0 chr2 25065251 . C . PASS END=25065253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:24,0 chr2 25095439 . C . PASS END=25095439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 25095440 . T . PASS END=25095568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1141:0,80,255:40,0 chr2 25095569 . A . PASS END=25095569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1064:0,44,255:27,0 chr2 25095570 . G . PASS END=25095570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 25095571 . G . PASS END=25095571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1041:0,62,255:27,0 chr2 25095572 . A . PASS END=25095572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 25095573 . A . PASS END=25095574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 25095575 . A . PASS END=25095575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25095576 . C . PASS END=25095585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,71,255:26,0 chr2 25095586 . G . PASS END=25095586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:24,0 chr2 25095587 . A . PASS END=25095588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:25,0 chr2 25100791 . C . PASS END=25100799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1256:0,81,255:38,0 chr2 25110514 . C . PASS END=25110516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 25110517 . C . PASS END=25110517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 25110518 . T . PASS END=25110531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:24,0 chr2 25110532 . A . PASS END=25110532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:23,0 chr2 25110533 . C . PASS END=25110533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 25110534 . A . PASS END=25110547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 25110548 . A . PASS END=25110548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 25110549 . G . PASS END=25110552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:24,0 chr2 25141182 . C . PASS END=25141202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr2 25141203 . C . PASS END=25141224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 25141225 . T . PASS END=25141225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 25141226 . G . PASS END=25141243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 25141244 . G . PASS END=25141260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,582:0,44,255:19,0 chr2 25141261 . A . PASS END=25141263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr2 25141264 . C . PASS END=25141264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 25141265 . A . PASS END=25141269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 25141270 . A . PASS END=25141270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,688:0,33,255:20,0 chr2 25141271 . C . PASS END=25141284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,840:0,72,255:24,0 chr2 25141285 . A . PASS END=25141285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 25141286 . C . PASS END=25141287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 25141288 . A . PASS END=25141288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 25141289 . T . PASS END=25141306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr2 25141307 . G . PASS END=25141307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,0 chr2 25141308 . C . PASS END=25141341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,762:0,66,255:25,0 chr2 25141342 . T . PASS END=25141342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:21,0 chr2 25141343 . G . PASS END=25141346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 25141347 . G . PASS END=25141347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 25141348 . C . PASS END=25141349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 25141350 . C . PASS END=25141350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:20,0 chr2 25141351 . A . PASS END=25141361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr2 25141362 . A . PASS END=25141362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr2 25141363 . G . PASS END=25141364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 25141365 . C . PASS END=25141365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr2 25141366 . G . PASS END=25141395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr2 25141396 . T . PASS END=25141396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr2 25141397 . A . PASS END=25141401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 25141402 . A . PASS END=25141404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 25141405 . A . PASS END=25141409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 25141410 . G . PASS END=25141414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 25141415 . T . PASS END=25141417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 25141418 . T . PASS END=25141421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 25141422 . C . PASS END=25141434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:25,0 chr2 25141435 . T . PASS END=25141435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:22,0 chr2 25141436 . A . PASS END=25141455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr2 25141456 . A . PASS END=25141456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:26,2 chr2 25141457 . C . PASS END=25141457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,922:0,15,255:26,2 chr2 25141458 . C . PASS END=25141458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:26,0 chr2 25141459 . C . PASS END=25141476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:26:0,67,947:0,67,255:26,0 chr2 25141477 . T . PASS END=25141478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 25141479 . T . PASS END=25141479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:27,0 chr2 25141480 . T . PASS END=25141484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 25141485 . G . PASS END=25141485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 25141486 . A . PASS END=25141487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 25141488 . C . PASS END=25141488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 25141489 . A . PASS END=25141495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 25141496 . G . PASS END=25141502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 25141503 . G . PASS END=25141506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 25141507 . A . PASS END=25141518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1001:0,73,255:26,0 chr2 25141519 . A . PASS END=25141520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25141521 . T . PASS END=25141521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 25141522 . C . PASS END=25141532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 25141533 . G . PASS END=25141533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 25141534 . A . PASS END=25141548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:28,0 chr2 25141549 . T . PASS END=25141549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr2 25141550 . C . PASS END=25141550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25141551 . G . PASS END=25141561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 25141562 . C . PASS END=25141572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 25141573 . A . PASS END=25141607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr2 25141608 . G . PASS END=25141608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 25141609 . A . PASS END=25141615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 25141616 . G . PASS END=25141616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 25141617 . C . PASS END=25141619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 25141620 . C . PASS END=25141620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 25141621 . A . PASS END=25141621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:19,0 chr2 25141622 . G . PASS END=25141642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,612:0,48,255:19,0 chr2 25141643 . T . PASS END=25141643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 25141644 . T . PASS END=25141657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,627:0,40,255:19,0 chr2 25141658 . G . PASS END=25141665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 25141666 . T . PASS END=25141666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr2 25141667 . T . PASS END=25141667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,705:0,24,255:19,0 chr2 25141668 . C . PASS END=25141668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 25141669 . T . PASS END=25141669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:19,0 chr2 25141670 . C . PASS END=25141670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 25141671 . C . PASS END=25141671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 25141672 . A . PASS END=25141700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr2 25141701 . G . PASS END=25141715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:20,0 chr2 25141716 . C . PASS END=25141723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 25141724 . A . PASS END=25141764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 25141765 . C . PASS END=25141765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 25141766 . C . PASS END=25141769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 25141770 . G . PASS END=25141770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 25141771 . T . PASS END=25141777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 25141778 . C . PASS END=25141779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 25141780 . G . PASS END=25141784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 25141785 . C . PASS END=25141797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 25141798 . T . PASS END=25141841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 25141842 . C . LowGQ END=25141842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:7,0 chr2 25141843 . T . PASS END=25141856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 25170485 . C . PASS END=25170496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr2 25170497 . T . PASS END=25170497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 25170498 . T . PASS END=25170499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 25170500 . C . PASS END=25170500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 25170501 . A . PASS END=25170517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:25,0 chr2 25170518 . A . PASS END=25170526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:30,0 chr2 25170527 . T . PASS END=25170527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 25170528 . G . PASS END=25170597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1139:0,80,255:38,0 chr2 25170598 . A . PASS END=25170598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:30,0 chr2 25170599 . C . PASS END=25170617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:32,0 chr2 25174263 . C . PASS END=25174264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:33,0 chr2 25174265 . T . PASS END=25174265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:30,0 chr2 25174266 . G . PASS END=25174395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1103:0,82,255:40,0 chr2 25174396 . A . PASS END=25174408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:25,0 chr2 25174409 . G . PASS END=25174411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 25174412 . T . PASS END=25174413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:22:0,39,585:0,66,255:13,0 chr2 25174414 . T . PASS END=25174416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr2 25174417 . A . PASS END=25174421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:19:0,39,585:0,57,255:13,0 chr2 25174422 . G . PASS END=25174423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:14,0 chr2 25178956 . T . PASS END=25179006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:77:0,120,1800:0,159,255:40,0 chr2 25179912 . C . PASS END=25180034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:47:0,108,1532:0,108,255:40,0 chr2 25180679 . C . PASS END=25180803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,984:0,89,255:40,0 chr2 25180804 . G . PASS END=25180810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,86,255:24,0 chr2 25180811 . A . PASS END=25180823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:23:0,42,630:0,44,255:17,0 chr2 25180824 . T . PASS END=25180824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:15,1 chr2 25180825 . T . PASS END=25180825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr2 25180826 . G . PASS END=25180833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 25180834 . C . PASS END=25180834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 25180835 . A . PASS END=25180843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 25181438 . T . PASS END=25181470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,111,1740:0,111,255:40,0 chr2 25186274 . C . PASS END=25186343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:53:0,120,1800:0,133,255:40,0 chr2 25190080 . T . PASS END=25190162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,120,1800:0,136,255:40,0 chr2 25194687 . T . PASS END=25194689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr2 25194690 . C . PASS END=25194703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 25194704 . T . PASS END=25194729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 25194730 . A . PASS END=25194740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr2 25194741 . G A, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,6,0:0,13,0:54:142,57,0,729,57,729:255,57,0:0,0:1.0418e+02,5.4182e+01,1.6567e-05,4.5000e+02,8.8952e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,10:0,0,10,9 chr2 25194742 . G . PASS END=25194750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:16,0 chr2 25194751 . C . PASS END=25194751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 25194752 . G . PASS END=25194773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr2 25265182 . A . PASS END=25265182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 25265183 . T . PASS END=25265183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 25265184 . G . PASS END=25265184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr2 25265185 . T . PASS END=25265186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,303:0,16,255:9,0 chr2 25265187 . C . PASS END=25265187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 25265188 . G . PASS END=25265188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr2 25314194 . G . PASS END=25314223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,153,255:40,0 chr2 25314224 . C . PASS END=25314270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,139,255:40,0 chr2 25315872 . G . PASS END=25315890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:26,0 chr2 25315891 . A . PASS END=25315915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1133:0,90,255:37,0 chr2 25315916 . C . PASS END=25315916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr2 25315917 . C . PASS END=25315983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1139:0,80,255:38,0 chr2 25315984 . G . PASS END=25315999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,77,255:26,0 chr2 25326506 . G . PASS END=25326506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25326507 . T . PASS END=25326507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25326508 . A . PASS END=25326629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1083:0,83,255:35,0 chr2 25326630 . A . PASS END=25326653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,71,255:26,0 chr2 25326654 . T . PASS END=25326656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 25344542 . T . PASS END=25344552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,750:0,61,255:26,0 chr2 25344553 . T . PASS END=25344663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,942:0,81,255:40,0 chr2 25351052 . A . PASS END=25351201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,114,1753:0,114,255:40,0 chr2 25352844 . C . PASS END=25352847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 25352848 . T . PASS END=25352848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 25352849 . C . PASS END=25352854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr2 25352855 . C . PASS END=25352876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:22,0 chr2 25352877 . G . PASS END=25352877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 25352878 . G . PASS END=25352880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 25352881 . A . PASS END=25352881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 25352882 . A . PASS END=25352890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,806:0,75,255:26,0 chr2 25352891 . C . PASS END=25352978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1125:0,83,255:35,0 chr2 25353421 . C . PASS END=25353499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:51:0,120,1800:0,132,255:40,0 chr2 25354237 . C . PASS END=25354243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:26,0 chr2 25354244 . A . PASS END=25354255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1178:0,96,255:35,0 chr2 25354256 . T . PASS END=25354256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1149:0,58,255:32,0 chr2 25354257 . C . PASS END=25354351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr2 25354352 . T . PASS END=25354352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr2 25354353 . C . PASS END=25354365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 25354366 . T . PASS END=25354366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:25,0 chr2 25354367 . C . PASS END=25354369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25354370 . T . PASS END=25354372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 25354619 . G . PASS END=25354619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 25354620 . G . PASS END=25354622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 25354623 . C . PASS END=25354623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 25354624 . A . PASS END=25354624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 25354625 . C . PASS END=25354625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 25354626 . A . LowGQ END=25354626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,374:10,0,255:11,1 chr2 25354627 . G . PASS END=25354627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:13:16:0,13,524:0,13,255:13,1 chr2 25354628 . T . PASS END=25354628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr2 25354629 . A . PASS END=25354631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:13,1 chr2 25354632 . G . PASS END=25354633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 25354634 . A . PASS END=25354635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 25354636 . A . LowGQ END=25354636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,412:2,0,255:12,0 chr2 25354637 . T . PASS END=25354637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 25354638 . G . PASS END=25354638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 25354639 . T . PASS END=25354639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:13,0 chr2 25354640 . T . PASS END=25354640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 25354641 . C . PASS END=25354641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:13,0 chr2 25354642 . A . PASS END=25354642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,445:0,14,255:13,0 chr2 25354643 . A . LowGQ END=25354643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,355:5,0,255:11,0 chr2 25354644 . C . PASS END=25354644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 25354645 . A . PASS END=25354646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 25354647 . G . PASS END=25354647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 25354648 . C . PASS END=25354648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 25354649 . T . PASS END=25354650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr2 25354651 . C . PASS END=25354651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,458:0,6,255:14,0 chr2 25354652 . T . PASS END=25354652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:14,0 chr2 25354653 . G . PASS END=25354653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 25354654 . A . PASS END=25354654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr2 25354655 . G . PASS END=25354656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 25354657 . C . PASS END=25354658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:12:15:0,12,410:0,12,255:14,0 chr2 25354659 . G . PASS END=25354663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 25354664 . G . PASS END=25354664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 25354665 . G . PASS END=25354665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 25354666 . C . PASS END=25354666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:13,0 chr2 25354667 . T . PASS END=25354671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 25354672 . A . PASS END=25354672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:14,0 chr2 25354673 . T . LowGQ END=25354673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,543:1,0,255:15,0 chr2 25354674 . C . PASS END=25354675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 25354676 . A . LowGQ END=25354676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,635:14,0,255:18,0 chr2 25354677 . C . PASS END=25354677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr2 25354678 . T . PASS END=25354678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 25354679 . A . PASS END=25354679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:18,0 chr2 25354680 . C . PASS END=25354683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,644:0,21,255:19,0 chr2 25354684 . C . PASS END=25354689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr2 25354690 . G . PASS END=25354690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 25354691 . G . PASS END=25354694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 25354695 . C . PASS END=25354695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 25354696 . T . PASS END=25354696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 25354697 . A . PASS END=25354697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr2 25354698 . C . PASS END=25354698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 25354699 . G . PASS END=25354704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 25354705 . G . PASS END=25354705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 25354706 . C . PASS END=25354710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 25354711 . A . PASS END=25354712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 25354713 . C . PASS END=25354720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 25354721 . C . PASS END=25354724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:18,0 chr2 25354725 . G . PASS END=25354725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 25354726 . A . PASS END=25354726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:20,0 chr2 25354727 . T . PASS END=25354729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 25354730 . T . PASS END=25354730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 25354731 . C . PASS END=25354731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 25354732 . A . PASS END=25354732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 25354733 . A . PASS END=25354736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 25354737 . G . PASS END=25354737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr2 25354738 . C . PASS END=25354741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 25354742 . A . PASS END=25354742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 25354743 . G . PASS END=25354744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 25354745 . A . PASS END=25354745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 25354746 . G . PASS END=25354747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 25354748 . G . PASS END=25354749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 25354750 . A . PASS END=25354750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:21,0 chr2 25354751 . T . PASS END=25354751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 25354752 . G . PASS END=25354764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:44:20:0,44,696:0,44,255:19,0 chr2 25354765 . G . PASS END=25354766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr2 25354767 . C . PASS END=25354775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,607:0,40,255:18,0 chr2 25354776 . C . PASS END=25354776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 25354777 . G . PASS END=25354777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 25354778 . T . PASS END=25354778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr2 25354779 . G . PASS END=25354780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 25355772 . G . PASS END=25355776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 25355777 . T . PASS END=25355777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:21,0 chr2 25355778 . T . PASS END=25355793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:26,0 chr2 25355794 . C . PASS END=25355794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr2 25355795 . A . PASS END=25355795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 25355796 . C . PASS END=25355806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr2 25355807 . T . PASS END=25355807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 25355808 . C . PASS END=25355814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1124:0,87,255:30,0 chr2 25355815 . G . PASS END=25355815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 25355816 . A . PASS END=25355834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr2 25355835 . A . PASS END=25355836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 25355837 . G . PASS END=25355840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 25355841 . C . PASS END=25355841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:27,0 chr2 25355842 . G . PASS END=25355845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 25355846 . C . PASS END=25355848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 25355849 . T . PASS END=25355852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 25355853 . T . PASS END=25355853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr2 25355854 . G . PASS END=25355857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 25355858 . C . PASS END=25355860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25355861 . G . PASS END=25355868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25355869 . C . PASS END=25355883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr2 25356252 . G . PASS END=25356303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,189,255:40,0 chr2 25358336 . G . PASS END=25358336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 25358337 . T . PASS END=25358355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,787:0,69,255:26,0 chr2 25358356 . C . PASS END=25358356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25358357 . A . PASS END=25358360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25358361 . A . PASS END=25358468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:28:0,81,1043:0,84,255:36,0 chr2 25358469 . T . PASS END=25358469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:27,0 chr2 25358470 . T . PASS END=25358471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 25358472 . A . PASS END=25358472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 25358473 . T . PASS END=25358483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 25358484 . A . PASS END=25358491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,923:0,64,255:26,0 chr2 25358492 . A . PASS END=25358508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:43:20:0,43,668:0,43,255:19,0 chr2 25359392 . T . PASS END=25359467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:42:0,102,1530:0,102,255:40,0 chr2 25360210 . C . PASS END=25360371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:36:0,96,1357:0,108,255:40,0 chr2 25361928 . G . PASS END=25361950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,787:0,66,255:25,0 chr2 25361951 . G . PASS END=25361954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:29,0 chr2 25361955 . T . PASS END=25361955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:27,0 chr2 25361956 . T . PASS END=25361963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:32,0 chr2 25361964 . T . PASS END=25361964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:30,0 chr2 25361965 . A . PASS END=25362052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1103:0,83,255:40,0 chr2 25362053 . C . PASS END=25362053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 25362054 . C . PASS END=25362054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 25362055 . A . PASS END=25362059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1070:0,74,255:25,0 chr2 25364235 . G . PASS END=25364299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:33:0,87,1151:0,87,255:40,0 chr2 25364300 . C . PASS END=25364302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 25366604 . G . PASS END=25366731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:37:0,85,1350:0,85,255:40,0 chr2 25367829 . A . PASS END=25367965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:54:0,120,1800:0,146,255:40,0 chr2 25372563 . C . PASS END=25372611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:40:0,90,1397:0,90,255:40,0 chr2 25374783 . T . PASS END=25374878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1196:0,84,255:40,0 chr2 25374879 . G . PASS END=25374879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 25374880 . C . PASS END=25374886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 25374887 . C . PASS END=25374889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 25376581 . G . PASS END=25376630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1079:0,86,255:36,0 chr2 25377104 . G . PASS END=25377137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,884:0,62,255:26,0 chr2 25377138 . G . PASS END=25377138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 25377139 . C . PASS END=25377156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:31,0 chr2 25377157 . A . PASS END=25377175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:26,0 chr2 25377176 . T C, 45.88 PASS DP=25;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=3.199;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,9,0:0.360,0.000:25:8,5,0:8,4,0:45:81,0,50,322,540,862:255,0,255:16,0:4.5883e+01,1.3383e-04,5.3000e+01,3.2185e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,11,4,5:7,9,4,5 chr2 25377177 . G . PASS END=25377185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 25377186 . T . PASS END=25377186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 25377187 . T . PASS END=25377188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 25377189 . C . PASS END=25377190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 25377191 . C . PASS END=25377191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 25377192 . G . PASS END=25377192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 25377193 . A . PASS END=25377195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 25377196 . T . PASS END=25377209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:17:0,51,651:0,51,255:17,0 chr2 25383830 . T . PASS END=25383830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 25383950 . T . PASS END=25383960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:12,0 chr2 25383961 . T . PASS END=25383961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr2 25383962 . C . PASS END=25383962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 25383963 . T . PASS END=25383963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 25383964 . T . PASS END=25383965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 25383966 . T . PASS END=25383966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 25383967 . A . PASS END=25383978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:16,0 chr2 25383979 . T . PASS END=25383980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 25383981 . A . PASS END=25383981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 25383982 . T . PASS END=25383982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 25383983 . G . PASS END=25383997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:50:17:0,50,607:0,50,255:21,0 chr2 25383998 . C . PASS END=25384015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,807:0,66,255:24,0 chr2 25384016 . G . PASS END=25384016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 25384017 . C . PASS END=25384017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 25384018 . T . PASS END=25384018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,734:0,41,255:22,0 chr2 25384019 . C . PASS END=25384037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 25384038 . C . PASS END=25384046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 25384047 . C . PASS END=25384097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,62,255:25,0 chr2 25384098 . C . PASS END=25384098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:25,0 chr2 25384099 . C . PASS END=25384102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,955:0,78,255:26,0 chr2 25384103 . G . PASS END=25384103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 25384104 . T . PASS END=25384127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:24,0 chr2 25384128 . A . PASS END=25384128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 25384129 . G . PASS END=25384157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,886:0,62,255:25,0 chr2 25384158 . G . PASS END=25384158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 25384159 . C . PASS END=25384168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 25384169 . G . PASS END=25384169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:20,0 chr2 25384170 . G . PASS END=25384171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 25384172 . A . PASS END=25384172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 25384173 . G . PASS END=25384190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 25384191 . C . PASS END=25384210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:19:0,50,706:0,50,255:19,0 chr2 25384211 . A . PASS END=25384268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,762:0,63,255:26,0 chr2 25384269 . T . PASS END=25384271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,731:0,52,255:19,0 chr2 25384272 . G . PASS END=25384285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 25384286 . T . PASS END=25384286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr2 25384287 . G . PASS END=25384307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,825:0,66,255:24,0 chr2 25384308 . G . PASS END=25384308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr2 25384309 . G . PASS END=25384320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:24,0 chr2 25384321 . G . PASS END=25384321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 25384322 . G . PASS END=25384327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 25384328 . C . PASS END=25384328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:19,0 chr2 25384329 . T . PASS END=25384332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 25384333 . T . PASS END=25384335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:18,0 chr2 25384336 . A . PASS END=25384336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:18,0 chr2 25384337 . G . PASS END=25384338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 25384339 . A . PASS END=25384339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:18,0 chr2 25384340 . G . PASS END=25384362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,659:0,41,255:18,0 chr2 25384363 . C . PASS END=25384367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr2 25384368 . T . PASS END=25384368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:11,0 chr2 25384369 . T . PASS END=25384375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,495:0,32,255:12,0 chr2 25384376 . A . PASS END=25384377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:10,0 chr2 25384378 . C . PASS END=25384391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 25384392 . G . PASS END=25384392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 25384393 . G . PASS END=25384418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:16,0 chr2 25384419 . T . PASS END=25384419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:14,0 chr2 25384420 . C . PASS END=25384461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,615:0,51,255:18,0 chr2 25384462 . T . PASS END=25384462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 25384463 . G . PASS END=25384480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 25384481 . G . PASS END=25384481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 25384482 . T . PASS END=25384500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:16,0 chr2 25384501 . C . PASS END=25384511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 25384512 . T . PASS END=25384518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr2 25384519 . T . PASS END=25384519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 25384520 . G . PASS END=25384581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr2 25384582 . T . PASS END=25384582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,435:0,15,255:12,0 chr2 25384583 . C . PASS END=25384584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 25384585 . C . PASS END=25384590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 25384591 . A . PASS END=25384592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 25384593 . A . PASS END=25384593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 25384594 . G . PASS END=25384604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr2 25384605 . C . PASS END=25384605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr2 25384606 . A . PASS END=25384621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 25384623 . T . PASS END=25384623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 25387510 . C . PASS END=25387524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 25387525 . C . PASS END=25387525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 25387526 . G . PASS END=25387557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,609:0,41,255:19,0 chr2 25387558 . G . PASS END=25387560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 25387561 . C . PASS END=25387561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 25387562 . C . PASS END=25387569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 25387570 . C . PASS END=25387571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 25387572 . C . PASS END=25387572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 25387573 . T . PASS END=25387573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 25387574 . T . PASS END=25387589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 25387590 . G . PASS END=25387590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 25387591 . C . PASS END=25387594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 25387595 . A . PASS END=25387595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 25387596 . A . PASS END=25387605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 25387606 . C . PASS END=25387616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 25387617 . A . PASS END=25387619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 25387620 . G . PASS END=25387638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:19,0 chr2 25387639 . C . PASS END=25387639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 25387640 . A . PASS END=25387641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 25387652 . G . PASS END=25387652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 25388565 . A . PASS END=25388565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 25388567 . G . PASS END=25388567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 25391499 . T . PASS END=25391499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 25391559 . G . PASS END=25391559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr2 25457148 . T . PASS END=25457168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,787:0,61,255:26,0 chr2 25457169 . C . PASS END=25457169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 25457170 . T . PASS END=25457170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 25457171 . T . PASS END=25457178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 25457179 . G . PASS END=25457179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 25457180 . C . PASS END=25457184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 25457185 . A . PASS END=25457185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:25,0 chr2 25457186 . G . PASS END=25457193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 25457194 . A . PASS END=25457194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 25457195 . T . PASS END=25457199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 25457200 . G . PASS END=25457201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25457202 . C . PASS END=25457205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 25457206 . C . PASS END=25457214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 25457215 . C . PASS END=25457225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr2 25457226 . T . PASS END=25457260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,668:0,47,255:19,0 chr2 25457261 . C . PASS END=25457284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:12,0 chr2 25457285 . A . PASS END=25457286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 25457287 . A . PASS END=25457289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 25458546 . C T, 50.00 PASS DP=82;MQ=248.81;MQRankSum=7.417;ReadPosRankSum=2.853;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,42,0:0.512,0.000:82:19,20,0:21,22,0:48:85,0,50,1494,1430,2924:255,0,255:38,0:5.0000e+01,6.5492e-05,5.2950e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,21,25,17:28,12,23,19 chr2 25458576 . C . PASS END=25458583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:77:0,120,1800:0,231,255:40,0 chr2 25458584 . T . PASS END=25458694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:52:0,120,1800:0,156,255:40,0 chr2 25459804 . C . PASS END=25459805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 25459806 . T . PASS END=25459806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 25459807 . T . PASS END=25459809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 25459810 . C . PASS END=25459821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr2 25459822 . G . PASS END=25459843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,513:0,45,255:17,0 chr2 25459844 . C . PASS END=25459844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 25459845 . A . PASS END=25459852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 25459853 . A . PASS END=25459853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 25459854 . T . PASS END=25459858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 25459859 . A . PASS END=25459859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 25459860 . G . PASS END=25459861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 25459862 . G . PASS END=25459862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 25459863 . G . PASS END=25459863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 25459864 . A . PASS END=25459864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 25459865 . T . PASS END=25459868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 25459869 . A . PASS END=25459869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr2 25459870 . A . PASS END=25459874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr2 25461999 . C . PASS END=25462084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,128,255:40,0 chr2 25462359 . C . PASS END=25462382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,142,255:40,0 chr2 25463171 . C . PASS END=25463188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,847:0,69,255:26,0 chr2 25463189 . G . PASS END=25463263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,994:0,81,255:37,0 chr2 25463264 . G . PASS END=25463264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1227:0,56,255:30,0 chr2 25463265 . G . PASS END=25463283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,83,255:34,0 chr2 25463284 . G . PASS END=25463285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,87,255:25,0 chr2 25463286 . C . PASS END=25463300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:27,0 chr2 25463301 . A . PASS END=25463319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,917:0,78,255:26,0 chr2 25463509 . C . PASS END=25463525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:17,0 chr2 25463526 . G . PASS END=25463526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 25463527 . C . PASS END=25463566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,629:0,48,255:18,0 chr2 25463567 . A . PASS END=25463567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 25463568 . A . PASS END=25463575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr2 25463576 . A . PASS END=25463576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 25463577 . T . PASS END=25463580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 25463581 . A . PASS END=25463584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 25463585 . G . PASS END=25463589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 25463590 . A . PASS END=25463590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr2 25463591 . C . PASS END=25463594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 25463595 . T . PASS END=25463599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 25464431 . A . PASS END=25464433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 25464434 . C . PASS END=25464442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr2 25464443 . G . PASS END=25464444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1086:0,74,255:30,0 chr2 25464445 . C . PASS END=25464576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:31:0,84,1180:0,92,255:40,0 chr2 25464578 . T . PASS END=25464578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 25466767 . C . PASS END=25466850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:38:0,93,1285:0,97,255:40,0 chr2 25466851 . C . PASS END=25466851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr2 25467023 . C . PASS END=25467039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,516:0,43,255:19,0 chr2 25467040 . T . PASS END=25467042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 25467043 . T . PASS END=25467043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 25467044 . T . PASS END=25467049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr2 25467050 . A . PASS END=25467050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 25467051 . G . PASS END=25467051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 25467052 . A . PASS END=25467052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,751:0,25,255:22,0 chr2 25467053 . A . PASS END=25467069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,911:0,75,255:26,0 chr2 25467070 . G . PASS END=25467078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr2 25467079 . T . PASS END=25467079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,904:0,51,255:29,0 chr2 25467080 . C . PASS END=25467090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1155:0,90,255:30,0 chr2 25467091 . A . PASS END=25467091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 25467092 . G . PASS END=25467094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 25467095 . G . PASS END=25467095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 25467096 . C . PASS END=25467101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 25467102 . G . PASS END=25467102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 25467103 . G . PASS END=25467109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,996:0,84,255:28,0 chr2 25467110 . T . PASS END=25467110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:26,0 chr2 25467111 . G . PASS END=25467115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25467116 . C . PASS END=25467117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25467118 . C . PASS END=25467136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1049:0,84,255:29,0 chr2 25467137 . G . PASS END=25467137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 25467138 . G . PASS END=25467140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25467141 . T . PASS END=25467141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 25467142 . T . PASS END=25467145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 25467146 . T . PASS END=25467146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 25467147 . A . PASS END=25467148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 25467149 . T . PASS END=25467149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:26,0 chr2 25467150 . G . PASS END=25467153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 25467154 . G . PASS END=25467176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,68,255:26,0 chr2 25467177 . C . PASS END=25467177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 25467178 . A . PASS END=25467179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 25467180 . G . PASS END=25467188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:23:0,42,675:0,42,255:16,0 chr2 25467189 . A . PASS END=25467191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:36:18:0,36,540:0,37,255:12,0 chr2 25467192 . C . PASS END=25467192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:11,0 chr2 25467193 . T . PASS END=25467194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,38,255:12,0 chr2 25467195 . C . PASS END=25467195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:13,0 chr2 25467196 . A . PASS END=25467196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 25467197 . C . PASS END=25467199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 25467200 . A . PASS END=25467200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:14,0 chr2 25467201 . A . PASS END=25467201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 25467202 . A . PASS END=25467202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:14,0 chr2 25467203 . A . PASS END=25467203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 25467204 . G . PASS END=25467207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,537:0,48,255:16,0 chr2 25467409 . C . PASS END=25467521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1131:0,80,255:39,0 chr2 25468122 . C . PASS END=25468154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr2 25468155 . G . PASS END=25468156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 25468157 . G . PASS END=25468157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 25468158 . G . PASS END=25468158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 25468159 . T . PASS END=25468166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 25468167 . G . PASS END=25468167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr2 25468168 . G . PASS END=25468199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr2 25468200 . G . PASS END=25468200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 25468201 . T . PASS END=25468201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 25468889 . C . PASS END=25468905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 25468906 . T . PASS END=25468907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 25468908 . C . PASS END=25468911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 25468912 . C . PASS END=25468933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:18,0 chr2 25469029 . C . PASS END=25469029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 25469030 . T . PASS END=25469030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,805:0,56,255:22,0 chr2 25469031 . C . PASS END=25469040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,961:0,65,255:25,0 chr2 25469041 . C . PASS END=25469041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25469042 . A . PASS END=25469042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 25469043 . T . PASS END=25469045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25469046 . A . PASS END=25469046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,921:0,51,255:25,0 chr2 25469047 . T . PASS END=25469049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25469050 . T . PASS END=25469050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,925:0,53,255:24,0 chr2 25469051 . C . PASS END=25469058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr2 25469059 . C . PASS END=25469061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25469062 . T . PASS END=25469063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25469064 . G . PASS END=25469064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:25,0 chr2 25469065 . G . PASS END=25469065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25469066 . C . PASS END=25469092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1148:0,80,255:33,0 chr2 25469093 . T . PASS END=25469093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:32,0 chr2 25469094 . T . PASS END=25469102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:33,0 chr2 25469103 . G . PASS END=25469105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 25469106 . G . PASS END=25469108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:27,0 chr2 25469109 . G . PASS END=25469145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:26,0 chr2 25469146 . C . PASS END=25469162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:41:18:0,41,629:0,41,255:19,0 chr2 25469163 . T . PASS END=25469163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 25469164 . A . PASS END=25469165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 25469166 . G . PASS END=25469166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr2 25469167 . G . PASS END=25469172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr2 25469173 . T . PASS END=25469173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:16,0 chr2 25469174 . C . PASS END=25469178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 25469489 . C . PASS END=25469505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr2 25469506 . C . PASS END=25469513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:24,0 chr2 25469514 . G . PASS END=25469514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr2 25469515 . C . PASS END=25469515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 25469516 . C . PASS END=25469517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,779:0,36,255:23,0 chr2 25469518 . G . PASS END=25469521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr2 25469522 . G . PASS END=25469590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1089:0,86,255:33,0 chr2 25469591 . T . PASS END=25469591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1037:0,63,255:25,0 chr2 25469592 . C . PASS END=25469595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25469596 . T . PASS END=25469596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 25469597 . C . PASS END=25469608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 25469609 . A . PASS END=25469609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 25469610 . C . PASS END=25469610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 25469611 . A . PASS END=25469612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1139:0,77,255:26,0 chr2 25469613 . C . PASS END=25469625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1177:0,80,255:28,0 chr2 25469626 . C . PASS END=25469635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,955:0,67,255:26,0 chr2 25469636 . T . PASS END=25469636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,840:0,54,255:23,0 chr2 25469637 . G . PASS END=25469645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,998:0,68,255:26,0 chr2 25469917 . C . PASS END=25469917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 25469920 . C . PASS END=25469950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1186:0,81,255:40,0 chr2 25469951 . A . PASS END=25470010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,106,1401:0,106,255:40,0 chr2 25470011 . A . PASS END=25470024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1375:0,100,255:39,0 chr2 25470025 . C . PASS END=25470027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,100,255:26,0 chr2 25470028 . C . PASS END=25470029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,108,255:27,0 chr2 25470031 . G . PASS END=25470031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 25470460 . C . PASS END=25470462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 25470463 . T . PASS END=25470464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr2 25470465 . A . PASS END=25470465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 25470466 . G . PASS END=25470466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:19,0 chr2 25470467 . A . PASS END=25470467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,599:0,46,255:20,0 chr2 25470468 . A . PASS END=25470468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr2 25470469 . T . PASS END=25470470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,617:0,46,255:20,0 chr2 25470471 . T . PASS END=25470471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr2 25470472 . G . PASS END=25470472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 25470473 . C . PASS END=25470475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr2 25470476 . T . PASS END=25470476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:21,0 chr2 25470477 . C . PASS END=25470477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 25470478 . T . PASS END=25470478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:22,0 chr2 25470479 . C . PASS END=25470480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 25470481 . G . PASS END=25470481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:23,0 chr2 25470482 . A . PASS END=25470488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr2 25470489 . T . PASS END=25470514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,956:0,80,255:37,0 chr2 25470515 . C . PASS END=25470516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:32,0 chr2 25470517 . G . PASS END=25470588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,81,255:38,0 chr2 25470589 . C . PASS END=25470610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr2 25470611 . C . PASS END=25470611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr2 25470612 . G . PASS END=25470612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 25470613 . G . PASS END=25470618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr2 25470906 . C . PASS END=25470914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:23,0 chr2 25470915 . T . PASS END=25470915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 25470916 . G . PASS END=25470965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,878:0,65,255:26,0 chr2 25470966 . C . PASS END=25471025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1188:0,85,255:35,0 chr2 25471026 . A . PASS END=25471026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:29,0 chr2 25471027 . G . PASS END=25471027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 25471028 . G . PASS END=25471028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr2 25471029 . A . PASS END=25471100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1202:0,87,255:34,0 chr2 25471101 . G . PASS END=25471121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,951:0,65,255:26,0 chr2 25472487 . C . PASS END=25472593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:64:0,120,1800:0,190,255:40,0 chr2 25474781 . C . PASS END=25474781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 25474782 . A . LowGQ END=25474782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:13,0,146:5,0 chr2 25474783 . C . PASS END=25474793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 25474794 . C . PASS END=25474797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 25474798 . G . PASS END=25474798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 25474799 . C . PASS END=25474829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr2 25474830 . A . PASS END=25474853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr2 25474854 . G . PASS END=25474883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr2 25474884 . C . PASS END=25474884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 25474885 . G . PASS END=25474885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 25474886 . G . PASS END=25474892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 25474893 . A . PASS END=25474941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,44,255:19,0 chr2 25474942 . C . PASS END=25474942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 25474943 . T . PASS END=25474956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr2 25474957 . G . PASS END=25474963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr2 25475063 . C . PASS END=25475065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 25475066 . T . PASS END=25475066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:15,0 chr2 25497804 . C . PASS END=25497804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 25497810 . C . PASS END=25497814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr2 25497815 . T . PASS END=25497815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr2 25497816 . T . PASS END=25497824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:17,0 chr2 25497825 . T . PASS END=25497825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 25497826 . G . PASS END=25497844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,604:0,48,255:19,0 chr2 25497845 . T . PASS END=25497845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,580:0,2,255:17,0 chr2 25497846 . G . PASS END=25497852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 25497853 . C . PASS END=25497865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 25497866 . G . PASS END=25497885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr2 25497886 . A . PASS END=25497886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 25497887 . G . PASS END=25497897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr2 25497898 . G . PASS END=25497898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 25497899 . G . PASS END=25497913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 25497914 . T . PASS END=25497924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:13,0 chr2 25497925 . C . PASS END=25497928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 25497929 . A . PASS END=25497929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 25497930 . G . PASS END=25497952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 25497953 . A . PASS END=25497956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 25498369 . C . PASS END=25498412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:46:0,111,1644:0,111,255:40,0 chr2 25498933 . C . PASS END=25499035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:39:0,91,1375:0,91,255:40,0 chr2 25505257 . T . PASS END=25505279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,930:0,72,255:25,0 chr2 25505280 . A . PASS END=25505280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:22,0 chr2 25505281 . A . PASS END=25505287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 25505288 . G . PASS END=25505288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr2 25505289 . C . PASS END=25505324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:25,0 chr2 25505325 . C . PASS END=25505325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 25505326 . T . PASS END=25505334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,922:0,72,255:24,0 chr2 25505335 . C . PASS END=25505348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:18,0 chr2 25505349 . A . PASS END=25505349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr2 25505350 . G . PASS END=25505364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 25505365 . T . PASS END=25505383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:13:0,33,495:0,39,255:13,0 chr2 25505384 . A . PASS END=25505393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:20:12:0,20,402:0,20,255:9,0 chr2 25505394 . C . PASS END=25505395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:10,0 chr2 25505396 . G . PASS END=25505401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 25505402 . T . PASS END=25505402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:7,0 chr2 25505403 . C . PASS END=25505410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:8,0 chr2 25505411 . G . PASS END=25505411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 25505412 . C . PASS END=25505412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 25505413 . T . PASS END=25505414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 25505415 . G . PASS END=25505468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr2 25505469 . T . PASS END=25505481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 25505482 . G . PASS END=25505482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 25505483 . T . PASS END=25505488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr2 25505489 . T . PASS END=25505489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 25505490 . T . PASS END=25505492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 25505493 . G . PASS END=25505493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 25505494 . T . PASS END=25505496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 25505497 . T . PASS END=25505497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 25505498 . A . PASS END=25505500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 25505501 . T . PASS END=25505501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:10,0 chr2 25505502 . C . PASS END=25505503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 25505504 . G . PASS END=25505515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 25505516 . T . PASS END=25505516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 25505517 . C . PASS END=25505529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,488:0,39,255:13,0 chr2 25505530 . T . PASS END=25505530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 25505531 . G . PASS END=25505536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 25505537 . T . PASS END=25505537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 25505538 . T . PASS END=25505538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 25505539 . G . PASS END=25505539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 25505540 . G . PASS END=25505558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 25505559 . T . PASS END=25505559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,394:0,22,255:11,0 chr2 25505560 . T . PASS END=25505580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr2 25513783 . C . PASS END=25513787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 25513788 . T . PASS END=25513788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 25513789 . C . PASS END=25513801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,900:0,61,255:24,0 chr2 25513802 . G . PASS END=25513802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr2 25513803 . G . PASS END=25513812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,884:0,72,255:24,0 chr2 25523008 . C . PASS END=25523104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:36:0,99,1485:0,108,255:40,0 chr2 25523105 . T . PASS END=25523105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr2 25523106 . C . PASS END=25523112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1296:0,92,255:35,0 chr2 25536782 . C . PASS END=25536789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1158:0,85,255:32,0 chr2 25536790 . C . PASS END=25536803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:33,0 chr2 25536804 . G . PASS END=25536804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:30,0 chr2 25536805 . C . PASS END=25536826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1271:0,89,255:34,0 chr2 25536827 . G A, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.960;ReadPosRankSum=3.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,17,0:0.500,0.000:34:5,6,0:12,11,0:48:85,0,50,550,598,1148:255,0,255:14,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,11,6:5,12,10,7 chr2 25536828 . G . PASS END=25536830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr2 25536831 . C . PASS END=25536851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:24:0,62,945:0,62,255:26,0 chr2 25536852 . A . PASS END=25536852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:20,0 chr2 25536853 . T . PASS END=25536853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 25600199 . C . PASS END=25600199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 25600200 . T . PASS END=25600215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:18,0 chr2 25600216 . G . PASS END=25600225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 25600226 . A . PASS END=25600226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:20,0 chr2 25600227 . G . PASS END=25600233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 25600234 . T . PASS END=25600234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 25600235 . A . PASS END=25600271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:23,0 chr2 25600272 . T . PASS END=25600272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 25600273 . C . PASS END=25600296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr2 25600297 . G . PASS END=25600297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:23,0 chr2 25600298 . G . PASS END=25600320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 25600321 . G . PASS END=25600321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25600322 . C . PASS END=25600339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr2 25600340 . T . PASS END=25600340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 25600341 . G . PASS END=25600345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 25600346 . G . PASS END=25600346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 25600347 . A . PASS END=25600353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 25600354 . G . PASS END=25600356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 25600357 . A . PASS END=25600357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,745:0,22,255:17,0 chr2 25600358 . T . PASS END=25600373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:19:0,42,630:0,47,255:18,0 chr2 25600374 . G . PASS END=25600376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 25600377 . C . PASS END=25600409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 25600410 . T . PASS END=25600410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 25600411 . C . PASS END=25600421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 25600422 . C . PASS END=25600422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 25602159 . C . PASS END=25602179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,125,255:40,0 chr2 25602180 . C . PASS END=25602192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,144,255:40,0 chr2 25606705 . C . PASS END=25606758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,169,255:40,0 chr2 25608932 . T . PASS END=25608937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 25608938 . G . PASS END=25608939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25608940 . A . PASS END=25608942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 25608943 . G . PASS END=25608953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 25608954 . T . PASS END=25608954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 25608955 . G . PASS END=25608964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 25608965 . G . PASS END=25608981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,917:0,75,255:26,0 chr2 25609968 . C . PASS END=25610020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,133,255:40,0 chr2 25610158 . C . PASS END=25610247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,117,1542:0,117,255:40,0 chr2 25611071 . C . PASS END=25611079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 25611080 . A . PASS END=25611080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 25611081 . G . PASS END=25611082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 25611083 . C . PASS END=25611083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 25611084 . C . PASS END=25611088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:17,0 chr2 25611089 . G . PASS END=25611089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:16,0 chr2 25611090 . C . PASS END=25611097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,601:0,51,255:19,0 chr2 25611098 . C . PASS END=25611098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 25611099 . C . PASS END=25611116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,652:0,43,255:19,0 chr2 25611117 . G . PASS END=25611126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 25611127 . C . PASS END=25611128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,734:0,55,255:23,0 chr2 25611129 . G . PASS END=25611141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,893:0,62,255:25,0 chr2 25611142 . G . PASS END=25611142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 25611143 . A . PASS END=25611159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,953:0,75,255:25,0 chr2 25611160 . C . PASS END=25611160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 25611161 . G . PASS END=25611172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,930:0,62,255:24,0 chr2 25611173 . G . PASS END=25611173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 25611174 . C . PASS END=25611205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,869:0,69,255:23,0 chr2 25611206 . T . PASS END=25611207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 25611208 . T . PASS END=25611208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 25611209 . G . PASS END=25611230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr2 25637856 . T . PASS END=25637861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,137,255:40,0 chr2 25642384 . T . PASS END=25642404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,98,255:34,0 chr2 25650404 . C . PASS END=25650518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:51:0,115,1800:0,115,255:40,0 chr2 25655755 . C . PASS END=25655759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 25655760 . C . PASS END=25655762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 25655763 . C . PASS END=25655766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 25655767 . A . PASS END=25655767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 25655768 . G . PASS END=25655770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 25655771 . C . PASS END=25655771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr2 25655772 . T . PASS END=25655773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1099:0,77,255:29,0 chr2 25655774 . C . PASS END=25655868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1127:0,89,255:37,0 chr2 25656779 . C . PASS END=25656839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,148,255:40,0 chr2 25656840 . A . PASS END=25656864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,108,1620:0,143,255:40,0 chr2 25674417 . C . PASS END=25674435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:26,0 chr2 25674436 . G . PASS END=25674436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 25674437 . C . PASS END=25674443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1061:0,71,255:27,0 chr2 25674444 . G . PASS END=25674445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 25674446 . C . PASS END=25674447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 25674448 . G . PASS END=25674455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 25674456 . A . PASS END=25674457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 25674458 . C . PASS END=25674482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,86,255:29,0 chr2 25674483 . T . PASS END=25674486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 25674487 . C . PASS END=25674487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:23,0 chr2 25674488 . T . PASS END=25674490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:24,0 chr2 25674491 . G . PASS END=25674504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:18:0,51,765:0,54,255:18,0 chr2 25678274 . C . PASS END=25678363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:33:0,90,1233:0,90,255:40,0 chr2 25702735 . C . PASS END=25702757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 25702758 . T . PASS END=25702758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 25702759 . C . PASS END=25702760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 25702761 . A . PASS END=25702765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr2 25702766 . C . PASS END=25702767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 25702768 . C . PASS END=25702787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,543:0,45,255:17,0 chr2 25702788 . G . PASS END=25702789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:25,0 chr2 25702790 . G . PASS END=25702797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:30,0 chr2 25702798 . C . PASS END=25702798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 25702799 . T . PASS END=25702800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 25702801 . T . PASS END=25702801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 25702802 . G . PASS END=25702808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 25702809 . A . PASS END=25702809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 25702810 . A . PASS END=25702844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1127:0,87,255:31,0 chr2 25702845 . T . PASS END=25702872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,825:0,69,255:25,0 chr2 25702873 . G . PASS END=25702873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr2 25702874 . G . PASS END=25702876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 25702877 . G . PASS END=25702877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr2 25702878 . G . PASS END=25702887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,868:0,69,255:23,0 chr2 25702888 . T . PASS END=25702888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 25702889 . G . PASS END=25702890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 25702891 . G . PASS END=25702898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,53,255:18,0 chr2 25705665 . C . PASS END=25705735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:92:38:0,92,1291:0,92,255:40,0 chr2 25705736 . A . PASS END=25705736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1482:0,77,255:38,0 chr2 25705737 . G . PASS END=25705742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:42:0,109,1476:0,109,255:40,0 chr2 25754342 . A . PASS END=25754463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:30:0,81,1215:0,90,255:40,0 chr2 25754464 . T . PASS END=25754466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 25781196 . C . PASS END=25781258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:44:0,81,1215:0,116,255:40,0 chr2 25781259 . T . PASS END=25781275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,65,255:26,0 chr2 25781276 . T . PASS END=25781276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 25799707 . C . PASS END=25799712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:19,0 chr2 25799713 . G . PASS END=25799718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 25799719 . C . PASS END=25799719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr2 25799720 . T . PASS END=25799729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,984:0,65,255:26,0 chr2 25799730 . G . PASS END=25799733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25799734 . C . PASS END=25799735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 25799736 . G . PASS END=25799737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 25799738 . T . PASS END=25799739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 25799740 . G . PASS END=25799745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 25799746 . A . PASS END=25799746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr2 25799747 . G . PASS END=25799843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1152:0,80,255:35,0 chr2 25799844 . G . PASS END=25799844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 25799845 . G . PASS END=25799851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 25799852 . G . PASS END=25799852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:27,0 chr2 25799853 . A . PASS END=25799854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 25799855 . C . PASS END=25799873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:24,0 chr2 25803590 . C . PASS END=25803695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,105,1575:0,110,255:40,0 chr2 25818955 . C . PASS END=25819109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:94:32:0,94,1202:0,94,255:40,0 chr2 25820457 . C . PASS END=25820490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,177,255:40,0 chr2 25830105 . A . PASS END=25830190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,123,255:40,0 chr2 25851040 . C . PASS END=25851251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:31:0,84,1260:0,92,255:40,0 chr2 25851252 . A . PASS END=25851252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 25851253 . A . PASS END=25851253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 25861883 . G . PASS END=25861963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,117,1598:0,118,255:40,0 chr2 25875463 . G . PASS END=25875529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:68:0,120,1800:0,148,255:40,0 chr2 25964898 . T . PASS END=25964902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,984:0,78,255:26,0 chr2 25964903 . G . PASS END=25964903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr2 25964904 . A . PASS END=25964908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr2 25964909 . C . PASS END=25964925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1033:0,80,255:34,0 chr2 25964926 . A . PASS END=25964926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:32,0 chr2 25964927 . G . PASS END=25965179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1238:0,90,255:40,0 chr2 25965180 . G . PASS END=25965180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:36,0 chr2 25965181 . T . PASS END=25965220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,84,255:38,0 chr2 25965221 . C . PASS END=25965221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:29,0 chr2 25965222 . T . PASS END=25965222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1039:0,30,255:29,0 chr2 25965223 . C . PASS END=25965224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1059:0,74,255:32,0 chr2 25965225 . A . PASS END=25965225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 25965226 . T . PASS END=25965226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1155:0,58,255:31,0 chr2 25965227 . A . PASS END=25965227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1141:0,61,255:31,0 chr2 25965228 . G . PASS END=25965228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 25965229 . C . PASS END=25965229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1183:0,58,255:35,0 chr2 25965230 . T . PASS END=25965232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1318:0,81,255:37,0 chr2 25965233 . G . PASS END=25965233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1304:0,59,255:37,0 chr2 25965234 . C . PASS END=25965236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1391:0,106,255:40,0 chr2 25965237 . T . PASS END=25965237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:35:41:0,35,1254:0,35,255:35,0 chr2 25965238 . A . PASS END=25965238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 25965239 . T . PASS END=25965240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:40:41:0,40,1259:0,40,255:35,0 chr2 25965241 . T . PASS END=25965241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:35:41:0,35,1302:0,35,255:35,0 chr2 25965242 . G . PASS END=25965244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1513:0,113,255:40,0 chr2 25965245 . T . PASS END=25965245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1373:0,76,255:38,0 chr2 25965246 . G . PASS END=25965249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:42:0,96,1421:0,96,255:40,0 chr2 25965250 . C . PASS END=25965250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1349:0,44,255:37,0 chr2 25965251 . T . PASS END=25965253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:45:0,85,1353:0,85,255:40,0 chr2 25965254 . C . PASS END=25965254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1324:0,74,255:39,0 chr2 25965255 . A . PASS END=25965255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 25965256 . T . PASS END=25965256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:49:46:0,49,1360:0,49,255:38,0 chr2 25965257 . A . PASS END=25965260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,121,255:40,0 chr2 25965261 . C . PASS END=25965261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:54:46:0,54,1254:0,54,255:39,0 chr2 25965262 . T . PASS END=25965262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 25965263 . T . PASS END=25965263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:55:46:0,55,1267:0,55,255:38,0 chr2 25965264 . C . PASS END=25965273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:44:0,101,1343:0,101,255:40,0 chr2 25965274 . A . PASS END=25965274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:28:44:0,28,1111:0,28,255:37,0 chr2 25965275 . G . PASS END=25965280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,113,1551:0,113,255:40,0 chr2 25965281 . G . PASS END=25965281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:35:45:0,35,1182:0,35,255:35,0 chr2 25965282 . A . PASS END=25965282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 25965283 . A . PASS END=25965283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:38:46:0,38,1243:0,38,255:33,0 chr2 25965284 . G . PASS END=25965285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:46:0,113,1492:0,113,255:40,0 chr2 25965286 . A . PASS END=25965286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:25:49:0,25,1321:0,25,255:38,0 chr2 25965287 . G . PASS END=25965288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,114,1601:0,114,255:40,0 chr2 25965289 . A . PASS END=25965289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:63:49:0,63,1302:0,63,255:39,0 chr2 25965290 . G . PASS END=25965293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,131,255:40,0 chr2 25965294 . C . PASS END=25965294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:38:46:0,38,1122:0,38,255:39,0 chr2 25965295 . T . PASS END=25965798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:46:0,92,1696:0,92,255:40,0 chr2 25965799 . T . PASS END=25965799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:44:46:0,44,1465:0,44,255:38,0 chr2 25965800 . C . PASS END=25966879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1167:0,88,255:40,0 chr2 25966880 . T . PASS END=25966883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,892:0,76,255:26,0 chr2 25966884 . C . PASS END=25966886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 25966887 . T . PASS END=25966949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,894:0,64,255:26,0 chr2 25966950 . G . PASS END=25966950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 25966951 . G . PASS END=25966971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,876:0,66,255:24,0 chr2 25966972 . G . PASS END=25966972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 25966973 . G . PASS END=25966980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 25966981 . T . PASS END=25966981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 25966982 . C . PASS END=25966982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 25966983 . T . PASS END=25966983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:19,0 chr2 25966984 . C . PASS END=25966989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 25966990 . C . PASS END=25966990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr2 25966991 . C . PASS END=25967054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,892:0,62,255:26,0 chr2 25967055 . T . PASS END=25967103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:19,0 chr2 25967104 . G . PASS END=25967104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:12,0 chr2 25967105 . G . PASS END=25967122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,462:0,45,255:15,0 chr2 25967123 . G . LowGQ END=25967123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,473:21,0,255:14,0 chr2 25967124 . G . PASS END=25967128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 25967129 . G . PASS END=25967129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:15,0 chr2 25967130 . T . PASS END=25967132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 25967133 . T . PASS END=25967133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 25967134 . G . PASS END=25967140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:17,0 chr2 25967141 . T . PASS END=25967141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 25967142 . C . PASS END=25967148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 25967149 . A . PASS END=25967149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,484:0,34,255:14,0 chr2 25967150 . C . PASS END=25967150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 25967151 . T . LowGQ END=25967151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,455:2,0,255:12,0 chr2 25967152 . G . PASS END=25967162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 25967163 . A . PASS END=25967163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 25967164 . G . PASS END=25967171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 25967172 . G . PASS END=25967172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 25967173 . G . PASS END=25967173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 25967174 . C . PASS END=25967176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 25967177 . C . PASS END=25967177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:12,0 chr2 25967178 . A . PASS END=25967187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 25967188 . G . PASS END=25967194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 25967195 . T . PASS END=25967195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr2 25967196 . C . PASS END=25967199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 25967200 . G . PASS END=25967200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 25967201 . C . PASS END=25967227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,562:0,48,255:17,0 chr2 25967228 . T . PASS END=25967228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 25967229 . G . PASS END=25967230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr2 25967231 . C . PASS END=25967232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 25967233 . G . PASS END=25967233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 25967234 . C . PASS END=25967234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 25967235 . A . PASS END=25967235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 25967236 . A . PASS END=25967236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 25967237 . G . PASS END=25967239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:21:0,53,810:0,53,255:19,0 chr2 25967240 . T . PASS END=25967241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 25967242 . C . PASS END=25967245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 25967246 . C . PASS END=25967246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 25967247 . T . PASS END=25967247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 25967248 . C . PASS END=25967248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 25967249 . C . PASS END=25967249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 25967250 . T . PASS END=25967255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 25967256 . G . PASS END=25967257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 25967258 . T . PASS END=25967258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 25967259 . A . PASS END=25967259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr2 25967260 . G . PASS END=25967265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 25967266 . G . PASS END=25967266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25967267 . T . PASS END=25967267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 25967268 . G . PASS END=25967323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1094:0,84,255:30,0 chr2 25967324 . G . PASS END=25967338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,980:0,70,255:26,0 chr2 25967339 . C . PASS END=25967340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 25967341 . G . PASS END=25967341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 25967342 . G . PASS END=25967345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 25972565 . C . PASS END=25972588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,801:0,62,255:26,0 chr2 25972589 . C . PASS END=25972644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:36,0 chr2 25972645 . G . PASS END=25972645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr2 25972646 . G . PASS END=25972696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:34:0,82,1329:0,82,255:37,0 chr2 25972697 . C . PASS END=25972714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:26,0 chr2 25972715 . A . PASS END=25972717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 25972718 . C . PASS END=25972748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,800:0,66,255:24,0 chr2 25972749 . A . PASS END=25972749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 25972750 . C . PASS END=25972782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,908:0,61,255:26,0 chr2 25972783 . C . PASS END=25973186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:33:0,86,1217:0,86,255:40,0 chr2 25973187 . G . PASS END=25973187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1467:0,74,255:37,0 chr2 25973188 . G . PASS END=25973190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:88:42:0,88,1499:0,88,255:39,0 chr2 25973191 . T . PASS END=25973191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1368:0,71,255:37,0 chr2 25973192 . G . PASS END=25973271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1288:0,84,255:40,0 chr2 25973272 . T . PASS END=25973281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,990:0,90,255:26,0 chr2 25973282 . A . PASS END=25973282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:21,0 chr2 25976403 . C . PASS END=25976508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,176,255:40,0 chr2 25978887 . C . PASS END=25978983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:42:0,110,1535:0,110,255:40,0 chr2 25982351 . C . PASS END=25982358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:31,0 chr2 25982359 . C . PASS END=25982359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 25982360 . T . PASS END=25982493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1164:0,90,255:40,0 chr2 25982494 . A . PASS END=25982495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 25982496 . T . PASS END=25982497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 25982498 . A . PASS END=25982514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr2 25990452 . T . PASS END=25990595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:46:0,120,1800:0,138,255:40,0 chr2 25991611 . C . PASS END=25991612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr2 25991613 . G . PASS END=25991617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:25,0 chr2 25991618 . G . PASS END=25991737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1041:0,84,255:40,0 chr2 25994309 . C . PASS END=25994409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,100,1620:0,100,255:40,0 chr2 26017341 . C . PASS END=26017377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,182,255:40,0 chr2 26022254 . C . PASS END=26022290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:34:0,82,1194:0,82,255:36,0 chr2 26022291 . G . PASS END=26022291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:32,0 chr2 26022292 . C . PASS END=26022302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,102,1530:0,104,255:40,0 chr2 26022303 . A . LowGQ END=26022306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:0:46:0,0,1392:0,0,255:40,5 chr2 26022307 . C . PASS END=26022307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:19:45:0,19,1482:0,19,255:40,0 chr2 26022308 . T . PASS END=26022366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1305:0,101,255:40,0 chr2 26022367 . C . PASS END=26022369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 26022370 . T . PASS END=26022370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1064:0,44,255:24,0 chr2 26022371 . C . PASS END=26022379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,61,255:25,0 chr2 26022380 . C . PASS END=26022397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:19:0,42,630:0,44,255:19,0 chr2 26022398 . C . PASS END=26022404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 26029098 . C . PASS END=26029104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1000:0,78,255:26,0 chr2 26029105 . G . PASS END=26029209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:36:0,99,1396:0,106,255:40,0 chr2 26058407 . C . PASS END=26058409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:86:0,120,1800:0,245,255:40,0 chr2 26068160 . C . PASS END=26068162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,188,255:40,0 chr2 26068350 . C . PASS END=26068432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:80:0,120,1800:0,233,255:40,0 chr2 26101035 . C . PASS END=26101038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 26101039 . T . PASS END=26101039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 26101040 . T . PASS END=26101056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr2 26101057 . G . PASS END=26101059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 26101060 . C . PASS END=26101060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 26101061 . T . PASS END=26101061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 26101062 . G . PASS END=26101062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 26101063 . C . PASS END=26101066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 26101067 . T . PASS END=26101067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:19,0 chr2 26101068 . C . PASS END=26101068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26101069 . T . PASS END=26101070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 26101071 . C . PASS END=26101072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26101073 . T . PASS END=26101082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,676:0,43,255:19,0 chr2 26101083 . T . PASS END=26101083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:17,0 chr2 26101084 . T . PASS END=26101089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 26101090 . A . PASS END=26101091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 26151847 . T . PASS END=26151859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1174:0,96,255:34,0 chr2 26151860 . G . PASS END=26151860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1224:0,58,255:33,0 chr2 26151861 . C . PASS END=26151935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:36:0,91,1337:0,91,255:40,0 chr2 26151936 . G . PASS END=26151936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:33,0 chr2 26151937 . G . PASS END=26151940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,101,255:33,0 chr2 26152174 . C . PASS END=26152176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:25,0 chr2 26152177 . G . PASS END=26152222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1019:0,80,255:33,0 chr2 26152223 . T . PASS END=26152223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr2 26152224 . G . PASS END=26152234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1189:0,88,255:37,0 chr2 26152235 . T . PASS END=26152235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:36,0 chr2 26152236 . G . PASS END=26152262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:38:0,85,1406:0,85,255:39,0 chr2 26152263 . G . PASS END=26152263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:37,0 chr2 26152264 . T . PASS END=26152305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:36:0,82,1199:0,82,255:39,0 chr2 26152306 . G . PASS END=26152306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:31,0 chr2 26152307 . G . PASS END=26152314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,92,255:32,0 chr2 26152315 . A . PASS END=26152326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:27:0,65,992:0,65,255:26,0 chr2 26152327 . A . PASS END=26152327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr2 26152328 . G . PASS END=26152342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:23:0,64,923:0,64,255:25,0 chr2 26152343 . C . PASS END=26152343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 26152344 . A . PASS END=26152345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26152346 . C . PASS END=26152346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 26152824 . C . PASS END=26152830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1139:0,90,255:33,0 chr2 26152831 . C . PASS END=26152841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,99,1268:0,102,255:36,0 chr2 26152842 . C . PASS END=26152842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 26152843 . C . PASS END=26152909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,84,255:38,0 chr2 26152910 . G . PASS END=26152913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 26152914 . C . PASS END=26152917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26152918 . A . PASS END=26152932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr2 26157013 . T . PASS END=26157025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,173,255:40,0 chr2 26174658 . A . PASS END=26174774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:37:0,84,1260:0,107,255:40,0 chr2 26177136 . T . PASS END=26177142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 26177143 . T . PASS END=26177143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr2 26177144 . G . PASS END=26177145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26177146 . G . PASS END=26177160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:24,0 chr2 26177161 . C . PASS END=26177171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr2 26177172 . T . PASS END=26177197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,978:0,81,255:30,0 chr2 26177198 . A G, 48.35 PASS DP=33;MQ=250.00;MQRankSum=4.826;ReadPosRankSum=3.078;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,14,0:0.424,0.000:33:12,6,0:7,8,0:47:83,0,50,501,663,1163:255,0,255:18,0:4.8348e+01,8.5166e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,11,3:8,11,5,9 chr2 26177199 . T . PASS END=26177224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:32,0 chr2 26177225 . C . PASS END=26177225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 26177226 . G . PASS END=26177227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 26177228 . C . PASS END=26177228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 26177229 . T . PASS END=26177235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 26177236 . C . PASS END=26177254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 26178410 . C . PASS END=26178411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26178412 . T . PASS END=26178412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr2 26178413 . C . PASS END=26178415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 26178416 . G . PASS END=26178416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 26178417 . A . PASS END=26178423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 26178424 . T . PASS END=26178424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 26178425 . G . PASS END=26178430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,648:0,60,255:21,0 chr2 26178431 . G . PASS END=26178432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,750:0,47,255:21,0 chr2 26178433 . C . PASS END=26178436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 26178437 . C . PASS END=26178437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 26178438 . A . PASS END=26178444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,785:0,69,255:23,0 chr2 26178445 . G . PASS END=26178447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,747:0,52,255:23,0 chr2 26178448 . G . PASS END=26178452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 26178453 . G . PASS END=26178465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1027:0,87,255:29,0 chr2 26178466 . C . PASS END=26178467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 26178468 . C . PASS END=26178469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 26178470 . G . PASS END=26178474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1078:0,74,255:27,0 chr2 26178475 . C . PASS END=26178476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 26178477 . A . PASS END=26178477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr2 26178478 . T . PASS END=26178478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 26178479 . A . PASS END=26178479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 26178480 . G . PASS END=26178487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 26178488 . G . PASS END=26178488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,988:0,56,255:26,0 chr2 26178489 . T . PASS END=26178500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 26178501 . A . PASS END=26178501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:25,0 chr2 26178502 . T . PASS END=26178503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:25,0 chr2 26178504 . T . PASS END=26178504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:23,0 chr2 26178505 . C . PASS END=26178529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr2 26178530 . T . PASS END=26178530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr2 26178531 . T . PASS END=26178532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,726:0,69,255:23,0 chr2 26179212 . C . PASS END=26179313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,105,1512:0,110,255:40,0 chr2 26203242 . C . PASS END=26203386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:33:0,87,1160:0,88,255:40,0 chr2 26203387 . C . PASS END=26203387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:29,0 chr2 26203388 . G . PASS END=26203407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:34,0 chr2 26203408 . T . PASS END=26203408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1066:0,49,255:30,0 chr2 26203409 . A . PASS END=26203478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:37,0 chr2 26203479 . A . PASS END=26203511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,955:0,75,255:26,0 chr2 26203512 . T . PASS END=26203514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr2 26203515 . G . PASS END=26203525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 26203526 . A . PASS END=26203532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 26203533 . C . PASS END=26203536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1069:0,71,255:26,0 chr2 26203537 . G . PASS END=26203542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26203543 . A . PASS END=26203543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 26203544 . C . PASS END=26203549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 26203550 . T . PASS END=26203552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 26203553 . T . PASS END=26203558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26203559 . G . PASS END=26203560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 26203561 . C . PASS END=26203592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1163:0,80,255:31,0 chr2 26203593 . C . PASS END=26203595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 26203596 . C . PASS END=26203600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 26203601 . T . PASS END=26203601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:28,0 chr2 26203602 . C . PASS END=26203617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:29,0 chr2 26203618 . A . PASS END=26203618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 26203619 . G . PASS END=26203627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr2 26203628 . T . PASS END=26203628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 26203629 . C . PASS END=26203629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr2 26203630 . T . PASS END=26203630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 26203631 . C . PASS END=26203640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,988:0,87,255:30,0 chr2 26203641 . T . PASS END=26203650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:29,0 chr2 26203651 . A . PASS END=26203651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 26203652 . G . PASS END=26203654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 26203655 . T . PASS END=26203677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,970:0,67,255:26,0 chr2 26203678 . T C, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,13,0:0,16,0:84:172,87,0,1124,87,1124:255,87,0:0,0:1.3428e+02,8.4282e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,17:0,0,20,9 chr2 26203679 . G . PASS END=26203686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1070:0,74,255:25,0 chr2 26203687 . T . PASS END=26203696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 26203697 . T . PASS END=26203697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr2 26203698 . C . PASS END=26203703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,913:0,81,255:27,0 chr2 26203704 . T . PASS END=26203715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,915:0,64,255:24,0 chr2 26203716 . G . PASS END=26203745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr2 26203746 . G . PASS END=26203761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1057:0,87,255:30,0 chr2 26203762 . A . PASS END=26203770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 26203771 . A . PASS END=26203780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 26203781 . T . PASS END=26203781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,895:0,70,255:26,0 chr2 26203782 . C . PASS END=26203785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 26203786 . G . PASS END=26203786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26203787 . C . PASS END=26203787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr2 26203788 . A . PASS END=26203823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr2 26203824 . C . PASS END=26203824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 26203825 . T . PASS END=26203834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr2 26203835 . G . PASS END=26203835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 26203836 . G . PASS END=26203836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 26203837 . T . PASS END=26203867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,690:0,57,255:19,0 chr2 26203868 . G . PASS END=26203880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr2 26203881 . G . PASS END=26203881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 26203882 . T . PASS END=26203883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 26203884 . G . PASS END=26203886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26203887 . C . PASS END=26203888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 26203889 . G . PASS END=26203895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 26203896 . T . PASS END=26203897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:28,0 chr2 26203898 . A . PASS END=26203902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 26203903 . A . PASS END=26203903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr2 26203904 . G . PASS END=26203906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26203907 . T . PASS END=26203918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr2 26203919 . C . PASS END=26203919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:22,0 chr2 26203920 . T . PASS END=26203930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:26,0 chr2 26203931 . T . PASS END=26203944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,956:0,80,255:31,0 chr2 26203945 . C . PASS END=26203945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr2 26203946 . C . PASS END=26204075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:36:0,86,1278:0,86,255:40,0 chr2 26204076 . G . PASS END=26204076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:33,0 chr2 26204077 . A . PASS END=26204113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:34,0 chr2 26204114 . C . PASS END=26204135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:26,0 chr2 26204136 . A . PASS END=26204136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 26204137 . T . PASS END=26204140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 26204141 . A . PASS END=26204141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 26204142 . G . PASS END=26204147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 26204148 . G . PASS END=26204165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr2 26204166 . G . PASS END=26204166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:16,0 chr2 26204167 . G . PASS END=26204198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:19,0 chr2 26204199 . G . PASS END=26204214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:23,0 chr2 26204215 . A . PASS END=26204215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 26204216 . T . PASS END=26204216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:20,0 chr2 26204217 . C . PASS END=26204234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 26204235 . G . PASS END=26204318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:33,0 chr2 26204319 . C . PASS END=26204319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:28,0 chr2 26204320 . A . PASS END=26204395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1105:0,86,255:35,0 chr2 26204396 . T . PASS END=26204397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 26204398 . T . PASS END=26204403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 26204404 . A . PASS END=26204413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr2 26204414 . C . PASS END=26204416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26204417 . A . PASS END=26204428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:26,0 chr2 26204429 . T . PASS END=26204455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 26204456 . A . PASS END=26204456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 26204457 . G . PASS END=26204467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:18,0 chr2 26204468 . T . PASS END=26204469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:18:0,30,450:0,54,255:10,0 chr2 26204470 . G . PASS END=26204527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr2 26204528 . G . PASS END=26204565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr2 26204566 . T . PASS END=26204566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 26204567 . A . PASS END=26204602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:25,0 chr2 26204603 . C . PASS END=26204610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:24,0 chr2 26204611 . G . PASS END=26204611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr2 26204612 . T . PASS END=26204614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 26204615 . A . PASS END=26204615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:18,0 chr2 26204616 . G . PASS END=26204619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:23,0 chr2 26204620 . T . PASS END=26204620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 26204621 . T . PASS END=26204622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 26204623 . G . PASS END=26204623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 26204624 . G . PASS END=26204630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:23,0 chr2 26204631 . C . PASS END=26204631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 26204632 . C . PASS END=26204639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 26204640 . G A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=3.578;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,15,0:0.600,0.000:25:4,10,0:6,5,0:47:85,0,48,536,329,865:255,0,255:9,0:5.0000e+01,8.1283e-05,5.0601e+01,4.5000e+02,3.6372e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,8,7:4,6,7,8 chr2 26204641 . G . PASS END=26204652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 26204653 . C . PASS END=26204653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 26204654 . G . PASS END=26204661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 26204662 . A . PASS END=26204662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 26204663 . C . PASS END=26204677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,937:0,62,255:25,0 chr2 26204678 . C . PASS END=26204699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr2 26204700 . G . PASS END=26204700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 26204701 . T . PASS END=26204716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 26204717 . C . PASS END=26204723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26204724 . G . PASS END=26204728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 26204729 . G . PASS END=26204729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26204730 . G . PASS END=26204741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 26204742 . G . PASS END=26204773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 26204774 . T . PASS END=26204774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:13,0 chr2 26204775 . C . PASS END=26204778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 26204779 . C . PASS END=26204786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 26257478 . A . PASS END=26257604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1363:0,90,255:40,0 chr2 26321531 . G . PASS END=26321563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:84:0,120,1800:0,231,255:40,0 chr2 26321564 . A . PASS END=26321591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,3:91:99:89:0,120,1800:0,224,255:40,0 chr2 26332637 . G . PASS END=26332775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,136,255:40,0 chr2 26350013 . C . PASS END=26350098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:61:0,120,1800:0,167,255:40,0 chr2 26350099 . A . PASS END=26350102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,174,255:40,0 chr2 26350719 . A . PASS END=26350820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,108,1576:0,116,255:40,0 chr2 26357807 . A . PASS END=26357890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:56:0,120,1800:0,155,255:40,0 chr2 26396090 . A . PASS END=26396090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr2 26396091 . T . PASS END=26396092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,316:0,14,255:10,0 chr2 26396093 . G . PASS END=26396095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 26396096 . A . PASS END=26396096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 26396097 . A . PASS END=26396101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 26396102 . G . PASS END=26396102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 26396103 . C . PASS END=26396121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr2 26396122 . G . PASS END=26396128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 26396129 . A . PASS END=26396129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 26396130 . G . PASS END=26396133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 26396134 . G . PASS END=26396134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 26396135 . G . PASS END=26396150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:19,0 chr2 26396151 . A . PASS END=26396153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 26396154 . T . PASS END=26396158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26396159 . G . PASS END=26396164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26396165 . C . PASS END=26396170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 26396171 . C . PASS END=26396174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26396175 . T . PASS END=26396191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 26396192 . C . PASS END=26396192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr2 26396193 . T . PASS END=26396201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr2 26397742 . A . PASS END=26397742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 26397743 . T . PASS END=26397744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 26397745 . A . PASS END=26397746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:31:0,61,1072:0,61,255:30,1 chr2 26397747 . T . PASS END=26397747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr2 26397748 . A . PASS END=26397847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:31:0,90,1291:0,92,255:40,0 chr2 26399213 . G . PASS END=26399213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1388:0,108,255:36,0 chr2 26399214 . G A, 154.88 PASS DP=37;MQ=250.00;FractionInformativeReads=0.973 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,19,0:0,17,0:105:193,108,0,1344,108,1344:255,108,0:0,0:1.5488e+02,1.0488e+02,0.0000e+00,4.5000e+02,1.3965e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,13:0,0,22,14 chr2 26399215 . G . PASS END=26399251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,108,1281:0,108,255:40,0 chr2 26399252 . T . PASS END=26399335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:38:0,81,1291:0,81,255:40,0 chr2 26399336 . T . PASS END=26399344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:35:0,69,1035:0,89,255:26,0 chr2 26399345 . A . PASS END=26399353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,75,255:18,0 chr2 26405341 . A . PASS END=26405359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr2 26405360 . C . PASS END=26405360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 26405361 . A . PASS END=26405362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 26405836 . G . PASS END=26405947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,101,1449:0,101,255:40,0 chr2 26405948 . C . PASS END=26405966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,103,1249:0,103,255:40,0 chr2 26407102 . G . PASS END=26407119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr2 26407120 . A . PASS END=26407141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr2 26407142 . A . PASS END=26407143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 26407144 . T . PASS END=26407144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,300:0,14,255:9,0 chr2 26407145 . T . PASS END=26407146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 26407147 . A . PASS END=26407147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 26407148 . C . PASS END=26407161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 26407162 . G . LowGQ END=26407162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:10,0 chr2 26407163 . A . PASS END=26407177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:12,0 chr2 26407178 . T . PASS END=26407178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr2 26407179 . G . PASS END=26407212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,374:0,36,255:13,0 chr2 26407213 . A . PASS END=26407236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 26407237 . C . PASS END=26407243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26407244 . G . PASS END=26407244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr2 26407245 . A . PASS END=26407264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 26407265 . C . PASS END=26407267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr2 26407268 . T . PASS END=26407294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,210:6,0 chr2 26407295 . C . PASS END=26407295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,225:3,0 chr2 26407296 . G . PASS END=26407296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:4,0 chr2 26407297 . A . LowGQ END=26407369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,55:0,0,55:3,0 chr2 26407370 . G . PASS END=26407380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 26407381 . C . LowGQ END=26407381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr2 26407382 . G . PASS END=26407398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:6,0 chr2 26407399 . A . PASS END=26407402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 26407403 . T . PASS END=26407415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr2 26407416 . C . PASS END=26407416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 26407417 . C . PASS END=26407465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr2 26407466 . G . PASS END=26407470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 26407471 . C . PASS END=26407472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 26407473 . C . PASS END=26407519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,255:9,0 chr2 26407520 . T . LowGQ END=26407520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr2 26407521 . G . PASS END=26407523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 26407524 . G . PASS END=26407533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 26407534 . C . PASS END=26407545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 26407546 . C . PASS END=26407561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr2 26407562 . C . LowGQ END=26407562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,333:6,0,255:9,0 chr2 26407563 . G . PASS END=26407599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 26407600 . A . PASS END=26407606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 26407607 . A . PASS END=26407607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 26407608 . G . PASS END=26407657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr2 26407658 . A . PASS END=26407658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 26407659 . C . PASS END=26407700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr2 26407701 . G . PASS END=26407709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 26407710 . G . PASS END=26407729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 26407730 . A . PASS END=26407748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,155:0,12,155:6,0 chr2 26407749 . C . PASS END=26407757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 26407758 . C . LowGQ END=26407832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,39:3,0 chr2 26407833 . C . LowDepth;LowGQ END=26407932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 26407933 . G . PASS END=26408001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,139:0,12,139:6,0 chr2 26408002 . T . PASS END=26408007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 26408008 . G . PASS END=26408019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:12,0 chr2 26408020 . C . PASS END=26408026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 26408027 . G . PASS END=26408028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 26408029 . C . PASS END=26408029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 26408030 . C . PASS END=26408035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,596:0,48,255:17,0 chr2 26408036 . G . PASS END=26408036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 26408037 . C . PASS END=26408049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 26408050 . C . PASS END=26408050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 26408051 . C . PASS END=26408051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 26408052 . C . PASS END=26408052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr2 26408053 . C . PASS END=26408063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,645:0,54,255:19,0 chr2 26408064 . T C, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,8,0:0,13,0:60:148,63,0,806,63,806:255,63,0:0,0:1.1020e+02,6.0201e+01,4.1418e-06,4.5000e+02,9.4971e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,10:0,0,10,11 chr2 26408065 . C . PASS END=26408098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:19,0 chr2 26408099 . G . PASS END=26408099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 26408100 . G . PASS END=26408101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 26408102 . A . PASS END=26408103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:18,0 chr2 26408104 . C . PASS END=26408104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 26408105 . C . PASS END=26408123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,660:0,54,255:18,0 chr2 26408124 . A . PASS END=26408124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 26408125 . G . PASS END=26408143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,558:0,48,255:16,0 chr2 26408144 . C . PASS END=26408145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,476:0,31,255:13,0 chr2 26409058 . G . PASS END=26409079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 26409080 . T . LowGQ END=26409080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr2 26409081 . C . PASS END=26409085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 26409086 . C . PASS END=26409099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 26409100 . C . PASS END=26409111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:15,0 chr2 26409112 . A . PASS END=26409112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 26409113 . A . PASS END=26409145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,553:0,45,255:16,0 chr2 26409146 . T . PASS END=26409146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 26409147 . T . PASS END=26409165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,604:0,48,255:16,0 chr2 26409166 . C . PASS END=26409186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 26409187 . A . LowGQ END=26409189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr2 26409190 . T . PASS END=26409195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 26409196 . C . PASS END=26409204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 26409205 . T . LowGQ END=26409205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:7,0 chr2 26409206 . A . PASS END=26409227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr2 26410100 . G . PASS END=26410102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:22,0 chr2 26410103 . G . PASS END=26410103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 26410104 . G . PASS END=26410109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 26410110 . C . PASS END=26410115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr2 26410116 . G . PASS END=26410148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,62,255:25,0 chr2 26410149 . C . PASS END=26410151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 26410152 . T . PASS END=26410152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 26410153 . A . PASS END=26410163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr2 26410164 . T . PASS END=26410175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,74,255:25,0 chr2 26410176 . G . PASS END=26410176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 26410177 . A . PASS END=26410181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 26410182 . A . PASS END=26410193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 26410194 . T . PASS END=26410200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26410201 . G . PASS END=26410208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26410209 . G . PASS END=26410220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr2 26410221 . C . PASS END=26410222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr2 26410223 . A . PASS END=26410229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:23,0 chr2 26410230 . A . PASS END=26410230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 26410231 . C . PASS END=26410231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 26410232 . C . PASS END=26410257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,706:0,56,255:20,0 chr2 26410258 . C . PASS END=26410260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26410261 . T . PASS END=26410261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 26410262 . C . PASS END=26410274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 26410275 . A . PASS END=26410275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 26410276 . G . PASS END=26410276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 26410277 . C . PASS END=26410277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:20,0 chr2 26410278 . G . PASS END=26410286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,922:0,69,255:25,0 chr2 26410287 . G . PASS END=26410287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 26410288 . C . PASS END=26410294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,901:0,72,255:25,0 chr2 26410295 . T . PASS END=26410296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:21,0 chr2 26410297 . T . PASS END=26410306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 26410307 . C . PASS END=26410316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr2 26410317 . A . PASS END=26410317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26410318 . A . PASS END=26410319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26410320 . A . PASS END=26410333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 26410334 . C . PASS END=26410334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:18,0 chr2 26410335 . C . PASS END=26410335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 26410336 . C . PASS END=26410336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:21,0 chr2 26410337 . T . PASS END=26410341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 26410342 . T . PASS END=26410343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,807:0,36,255:23,0 chr2 26410344 . T . PASS END=26410344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 26410345 . T . PASS END=26410345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 26410346 . C . PASS END=26410364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 26410365 . A . PASS END=26410365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr2 26410366 . A . PASS END=26410396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,856:0,66,255:24,0 chr2 26410397 . T . PASS END=26410407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 26410408 . C . PASS END=26410423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr2 26410424 . C . PASS END=26410427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26410428 . T . PASS END=26410431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26410432 . C . PASS END=26410433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 26410434 . G . PASS END=26410455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 26410456 . C . PASS END=26410475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:18,0 chr2 26410476 . A . PASS END=26410488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:14:0,33,495:0,42,255:13,0 chr2 26410489 . C . PASS END=26410489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 26410490 . G . PASS END=26410516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 26410517 . C . PASS END=26410520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:26:12:0,26,405:0,26,255:10,0 chr2 26410521 . G . PASS END=26410539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 26410540 . C . PASS END=26410540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr2 26410541 . C . PASS END=26410541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 26410542 . T . PASS END=26410542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 26410543 . C . PASS END=26410549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:15,0 chr2 26410550 . C . PASS END=26410550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 26410551 . G . PASS END=26410552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr2 26410553 . C . PASS END=26410553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr2 26410554 . C . PASS END=26410554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 26410555 . C . PASS END=26410557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:14,0 chr2 26410558 . C . PASS END=26410563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr2 26410564 . C . PASS END=26410564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr2 26410565 . C . PASS END=26410584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,586:0,54,255:19,0 chr2 26410585 . A . PASS END=26410587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 26410588 . C . PASS END=26410588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 26410589 . A . PASS END=26410593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr2 26410594 . T . PASS END=26410594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 26410595 . G . PASS END=26410598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr2 26410599 . C . PASS END=26410599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 26410600 . C . PASS END=26410601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 26410602 . T . PASS END=26410602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,627:0,30,255:19,0 chr2 26410603 . T . PASS END=26410606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 26410607 . T . PASS END=26410616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr2 26410617 . C . PASS END=26410617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,680:0,30,255:18,0 chr2 26410618 . T . PASS END=26410618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr2 26410619 . G . PASS END=26410639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,590:0,40,255:19,0 chr2 26410640 . G . PASS END=26410640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 26410641 . C . PASS END=26410642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr2 26410643 . T . PASS END=26410643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,512:0,21,255:15,0 chr2 26410644 . G . PASS END=26410656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr2 26410657 . C . PASS END=26410657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 26410658 . T . PASS END=26410667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 26410668 . A . PASS END=26410670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr2 26410671 . G . PASS END=26410673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr2 26410674 . G . PASS END=26410686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 26410687 . G . PASS END=26410710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,604:0,45,255:16,0 chr2 26410711 . T . PASS END=26410711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr2 26410712 . T . PASS END=26410722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr2 26410723 . A . PASS END=26410723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 26410724 . G . PASS END=26410743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,499:0,42,255:15,0 chr2 26410744 . T . PASS END=26410745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 26410746 . G . PASS END=26410855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,527:0,42,255:18,0 chr2 26410856 . C . PASS END=26410859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:37:17:0,37,585:0,37,255:13,0 chr2 26410860 . G . PASS END=26410868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:15,0 chr2 26410869 . A . PASS END=26410869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 26410870 . C . PASS END=26410881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr2 26410882 . T . PASS END=26410882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 26410883 . C . PASS END=26410904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr2 26410905 . C . PASS END=26410905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 26410906 . C . PASS END=26410907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 26410908 . C . PASS END=26410909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 26410910 . T . PASS END=26410911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 26410912 . C . PASS END=26410912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 26410913 . T . PASS END=26410918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr2 26410919 . G . PASS END=26410927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26410928 . C . PASS END=26410929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:19,0 chr2 26410930 . C . PASS END=26410932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26410933 . T . PASS END=26410933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 26410934 . G . PASS END=26410939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 26410940 . G . PASS END=26410944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26410945 . C . PASS END=26410974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr2 26410975 . A . PASS END=26410975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 26410976 . G . PASS END=26410982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 26410983 . G . PASS END=26410990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26410991 . C . PASS END=26410991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26410992 . T . PASS END=26411003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 26411004 . C . PASS END=26411011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 26411012 . T . PASS END=26411012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 26411013 . G . PASS END=26411015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 26411016 . A . PASS END=26411017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26411018 . C . PASS END=26411020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 26411021 . C . PASS END=26411021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 26411022 . T . PASS END=26411032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 26411033 . C . PASS END=26411035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 26411036 . T . PASS END=26411036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 26411037 . G . PASS END=26411053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 26411054 . T . PASS END=26411054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 26411055 . G . PASS END=26411056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26411057 . C . PASS END=26411060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 26411061 . C . PASS END=26411069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 26411070 . A . PASS END=26411070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr2 26411071 . A . PASS END=26411082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr2 26411083 . A . PASS END=26411083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 26411084 . G . PASS END=26411084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 26411085 . A . PASS END=26411085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr2 26411086 . A . PASS END=26411086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26411087 . G . PASS END=26411087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 26411088 . A . PASS END=26411093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26411094 . C . PASS END=26411126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,892:0,61,255:26,0 chr2 26413533 . C . PASS END=26413533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26413625 . C . PASS END=26413625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 26413630 . C . PASS END=26413630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26413653 . G . PASS END=26413653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 26413682 . A . PASS END=26413682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26413714 . G . PASS END=26413714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 26413716 . G . PASS END=26413716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 26413730 . G . PASS END=26413730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26413742 . G . PASS END=26413742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 26413764 . G . PASS END=26413764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 26413880 . G . PASS END=26413880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 26413937 . G . PASS END=26413937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 26414009 . C . PASS END=26414009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26414016 . T . PASS END=26414016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 26414060 . G . PASS END=26414060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 26414073 . C . PASS END=26414073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 26414119 . T . PASS END=26414137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1180:0,96,255:33,0 chr2 26414138 . T . PASS END=26414138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1109:0,55,255:31,0 chr2 26414139 . T . PASS END=26414279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:34:0,82,1255:0,82,255:40,0 chr2 26414280 . G . PASS END=26414280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1376:0,71,255:37,0 chr2 26414281 . G . PASS END=26414481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:38:0,91,1388:0,91,255:40,0 chr2 26414482 . G . PASS END=26414482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1241:0,31,255:31,0 chr2 26414483 . T . PASS END=26414497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1139:0,80,255:33,0 chr2 26415178 . C . PASS END=26415293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,113,1529:0,113,255:40,0 chr2 26416446 . C . PASS END=26416452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 26416453 . G . PASS END=26416476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr2 26416477 . C . PASS END=26416477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 26416478 . A . PASS END=26416478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 26416479 . G . PASS END=26416489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 26416490 . C . PASS END=26416491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26416492 . A . PASS END=26416555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1113:0,80,255:33,0 chr2 26416556 . C . PASS END=26416556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:29,0 chr2 26416557 . C . PASS END=26416591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1178:0,83,255:32,0 chr2 26416592 . A . PASS END=26416594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:77:29:0,77,1131:0,77,255:26,0 chr2 26416595 . C . PASS END=26416596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26416597 . A . PASS END=26416606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr2 26416607 . G . PASS END=26416607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26416608 . T . PASS END=26416615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26416616 . T . PASS END=26416624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,912:0,81,255:28,0 chr2 26416625 . T . PASS END=26416643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,884:0,61,255:26,0 chr2 26416654 . C . PASS END=26416654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26417428 . G . PASS END=26417428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 26417437 . A . PASS END=26417437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1224:0,111,255:37,0 chr2 26417439 . C . PASS END=26417495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1209:0,92,255:38,0 chr2 26417496 . G . PASS END=26417507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1023:0,71,255:26,0 chr2 26417954 . C . PASS END=26417954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 26417961 . C . PASS END=26418081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:32:0,82,1125:0,82,255:40,0 chr2 26418082 . A . PASS END=26418101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:67:28:0,67,986:0,67,255:26,0 chr2 26420559 . C . PASS END=26420646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,99,1496:0,99,255:40,0 chr2 26424018 . C . PASS END=26424190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:29:0,84,1054:0,87,255:40,0 chr2 26425102 . G . PASS END=26425182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:38:0,81,1215:0,81,255:40,0 chr2 26425183 . G . PASS END=26425188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:66:35:0,66,990:0,105,255:24,0 chr2 26426925 . G . PASS END=26426925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 26426931 . C . PASS END=26426956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr2 26426957 . G . PASS END=26426987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 26426988 . A . PASS END=26427005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:19,0 chr2 26427006 . T . PASS END=26427028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 26427029 . T . PASS END=26427046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 26427047 . A . PASS END=26427047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 26427048 . C . PASS END=26427053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 26427054 . A . PASS END=26427065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,233:6,0 chr2 26432649 . T . PASS END=26432758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,120,1800:0,123,255:40,0 chr2 26433585 . T . PASS END=26433683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1210:0,86,255:40,0 chr2 26435439 . C . PASS END=26435495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:78:0,120,1800:0,230,255:40,0 chr2 26435497 . T . PASS END=26435497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr2 26437312 . A . PASS END=26437445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:40:0,102,1334:0,102,255:40,1 chr2 26437922 . T . PASS END=26438045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:36:0,92,1300:0,92,255:40,0 chr2 26438047 . A . PASS END=26438047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 26453054 . A . PASS END=26453054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1304:0,105,255:35,0 chr2 26453058 . A . PASS END=26453161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1260:0,89,255:40,0 chr2 26453162 . C . PASS END=26453162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 26453164 . T . PASS END=26453164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:25,0 chr2 26455028 . C . PASS END=26455033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 26455034 . G . PASS END=26455129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1157:0,93,255:40,0 chr2 26455130 . T . PASS END=26455132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 26455133 . G . PASS END=26455137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 26455138 . A . PASS END=26455147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:25,0 chr2 26455160 . G . PASS END=26455160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 26457084 . C . PASS END=26457113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:36:0,98,1365:0,98,255:40,0 chr2 26457114 . T . PASS END=26457114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1502:0,74,255:40,0 chr2 26457115 . G . PASS END=26457215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:34:0,84,1260:0,90,255:40,0 chr2 26457216 . C . PASS END=26457224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,900:0,83,255:26,0 chr2 26459723 . T . PASS END=26459856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:31:0,87,1305:0,93,255:40,0 chr2 26461797 . G . PASS END=26461797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1488:0,96,255:39,0 chr2 26461799 . T . PASS END=26461799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 26461801 . C . PASS END=26461872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:49:0,117,1762:0,117,255:40,0 chr2 26461970 . T . PASS END=26462011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:106:0,120,1800:0,255,255:40,0 chr2 26467393 . C . PASS END=26467396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr2 26467397 . C . PASS END=26467397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 26467398 . C . PASS END=26467398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 26467399 . T . PASS END=26467403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 26467404 . A . PASS END=26467404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26467405 . G . PASS END=26467407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 26467408 . G . PASS END=26467412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1092:0,74,255:27,0 chr2 26467413 . T . PASS END=26467441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1033:0,87,255:30,0 chr2 26467442 . C . PASS END=26467442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:28,0 chr2 26467443 . C . PASS END=26467443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr2 26467444 . A . PASS END=26467448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 26467449 . C . PASS END=26467451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 26467452 . G . PASS END=26467465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1141:0,90,255:30,0 chr2 26467481 . C . PASS END=26467481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 26467501 . A . PASS END=26467501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:19,0 chr2 26467631 . A . PASS END=26467631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,364:0,5,255:8,0 chr2 26467665 . G . PASS END=26467665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 26467691 . G . PASS END=26467691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 26467694 . T . PASS END=26467694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 26467743 . C . PASS END=26467743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 26467814 . C . PASS END=26467814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 26467869 . G . PASS END=26467869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr2 26477123 . A . PASS END=26477123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:18:50:0,18,270:0,150,255:6,0 chr2 26477124 . T . LowGQ END=26477124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,12:56:0:56:0,0,1143:255,0,255:0,0 chr2 26477125 . G GACT, 212.46 PASS DP=56;MQ=249.89;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,23,0:0,32,0:162:244,165,0,2008,166,2008:255,113,0:0,62:2.1246e+02,1.6246e+02,0.0000e+00,4.5000e+02,1.9728e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,39,16:0,0,25,30 chr2 26477126 . A . LowGQ END=26477126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:16,42:58:0:58:0,0,0:255,0,255:40,0 chr2 26477127 . C . PASS END=26477168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:59:0,120,1800:0,164,255:40,1 chr2 26477169 . A . PASS END=26477186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,5:80:99:78:0,120,1800:0,156,255:40,0 chr2 26477201 . A . PASS END=26477201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 26477281 . T . PASS END=26477342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,110,1800:0,110,255:40,0 chr2 26483889 . A . PASS END=26483931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,156,255:40,0 chr2 26486248 . C . PASS END=26486348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,106,1590:0,106,255:40,0 chr2 26492816 . C . PASS END=26492816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 26492820 . G . PASS END=26492866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,144,255:40,0 chr2 26496517 . A . PASS END=26496618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:54:0,120,1800:0,146,255:40,0 chr2 26499941 . G . PASS END=26500001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,106,1399:0,106,255:40,0 chr2 26500002 . T . PASS END=26500002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1202:0,67,255:34,0 chr2 26500003 . C . PASS END=26500003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1398:0,103,255:35,0 chr2 26500004 . T . PASS END=26500004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1227:0,53,255:33,0 chr2 26500005 . C . PASS END=26500014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1252:0,84,255:37,0 chr2 26500015 . A . PASS END=26500015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:33,0 chr2 26500016 . G . PASS END=26500016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:20:38:0,20,1174:0,20,255:31,0 chr2 26500017 . C . PASS END=26500019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1258:0,91,255:34,0 chr2 26500020 . T . PASS END=26500020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:33,0 chr2 26500021 . G . PASS END=26500021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1272:0,92,255:31,0 chr2 26500022 . A . PASS END=26500022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1164:0,39,255:31,0 chr2 26500023 . C . PASS END=26500026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:33,0 chr2 26500027 . A . PASS END=26500027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:30,0 chr2 26500028 . G . PASS END=26500028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:31,0 chr2 26501472 . T . PASS END=26501472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 26501482 . G . PASS END=26501669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:40:0,104,1407:0,104,255:40,0 chr2 26502001 . A . PASS END=26502001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 26502003 . C . PASS END=26502003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 26502004 . T . PASS END=26502004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 26502005 . C . PASS END=26502020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:31,0 chr2 26502021 . T . PASS END=26502021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 26502022 . T . PASS END=26502035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1044:0,93,255:36,0 chr2 26502036 . A . PASS END=26502036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:34,0 chr2 26502037 . C . PASS END=26502139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1260:0,92,255:40,0 chr2 26502140 . G . PASS END=26502148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 26502149 . A . PASS END=26502149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26502150 . C . PASS END=26502150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 26502151 . T . PASS END=26502151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26502152 . C . PASS END=26502159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:24,0 chr2 26502160 . A . PASS END=26502174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:19,0 chr2 26502175 . A . PASS END=26502183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 26502862 . G . PASS END=26502879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1149:0,93,255:37,0 chr2 26502880 . A . PASS END=26502880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:35,0 chr2 26502881 . A . PASS END=26502959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,102,1338:0,111,255:40,0 chr2 26502960 . A . PASS END=26502960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1283:0,65,255:33,0 chr2 26502961 . C . PASS END=26502983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1216:0,92,255:36,0 chr2 26505713 . A . PASS END=26505715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr2 26505716 . G . PASS END=26505757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,829:0,66,255:25,0 chr2 26505758 . C . PASS END=26505758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,837:0,48,255:23,0 chr2 26505759 . T . PASS END=26505759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 26505760 . G . PASS END=26505792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1149:0,82,255:31,0 chr2 26505872 . G . PASS END=26505919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:43:0,120,1800:0,128,255:40,0 chr2 26506985 . A . PASS END=26507072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:37:0,111,1404:0,111,255:40,0 chr2 26507076 . A . PASS END=26507076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 26507751 . G . PASS END=26507825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:58:0,120,1800:0,157,255:40,0 chr2 26508275 . G . PASS END=26508281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 26508282 . T . PASS END=26508282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 26508283 . G . PASS END=26508287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:13,0 chr2 26508288 . C . PASS END=26508293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,503:0,42,255:14,0 chr2 26508294 . A . PASS END=26508294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 26508295 . G . PASS END=26508304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,444:0,42,255:15,0 chr2 26508305 . A . PASS END=26508305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 26508306 . A . PASS END=26508309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr2 26508310 . G . PASS END=26508323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:26,0 chr2 26508324 . C . PASS END=26508340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:31,0 chr2 26508341 . G . PASS END=26508341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:29,0 chr2 26508342 . G . PASS END=26508343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 26508344 . G . PASS END=26508344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 26508345 . C . PASS END=26508398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:32:0,90,1321:0,92,255:40,0 chr2 26508399 . G . PASS END=26508399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1346:0,78,255:39,0 chr2 26508400 . C . PASS END=26508455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:39:0,84,1309:0,84,255:40,0 chr2 26508456 . T . PASS END=26508456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:29:39:0,29,1192:0,29,255:28,0 chr2 26508457 . C . PASS END=26508474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1158:0,85,255:32,0 chr2 26508475 . G . PASS END=26508475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 26508476 . T . PASS END=26508481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 26508482 . T . PASS END=26508482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr2 26508483 . C . PASS END=26508485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 26508486 . G . PASS END=26508496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:23,0 chr2 26512784 . A . PASS END=26512784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 26512786 . G . PASS END=26512821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:75:0,120,1800:0,209,255:40,0 chr2 26512864 . C . PASS END=26512864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr2 26513062 . T . PASS END=26513062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 26513065 . T . PASS END=26513065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 26513089 . G . PASS END=26513089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 26513201 . A . PASS END=26513201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 26531445 . T . PASS END=26531547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:54:0,120,1800:0,132,255:40,2 chr2 26531954 . T . PASS END=26531975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:42:0,88,1520:0,88,255:40,0 chr2 26532390 . T . PASS END=26532449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:81:37:0,81,1295:0,81,255:40,0 chr2 26532812 . T . PASS END=26532820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 26532821 . G . PASS END=26532834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,566:0,45,255:19,0 chr2 26532835 . C . PASS END=26532973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:28:0,84,995:0,84,255:40,0 chr2 26533064 . C . PASS END=26533105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:43:0,108,1489:0,108,255:40,0 chr2 26533560 . C . PASS END=26533566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 26533567 . G . PASS END=26533574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr2 26533575 . A . PASS END=26533575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 26533576 . A . PASS END=26533592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,981:0,87,255:30,0 chr2 26533593 . A . PASS END=26533593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 26533594 . G . PASS END=26533647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1111:0,83,255:33,0 chr2 26533648 . C . PASS END=26533677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,808:0,66,255:25,0 chr2 26533678 . T . PASS END=26533678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 26533679 . T . PASS END=26533747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:23,0 chr2 26533748 . T . PASS END=26533748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 26533749 . C . PASS END=26533752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26533753 . A . PASS END=26533755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26533756 . G . PASS END=26533758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26533759 . A . PASS END=26533800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 26533801 . G . PASS END=26533814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 26533815 . G . PASS END=26533821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 26533822 . G . PASS END=26533824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26533825 . C . PASS END=26533825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 26533826 . C . PASS END=26533844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 26533845 . G . PASS END=26533845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 26533846 . C . PASS END=26533846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26533847 . A . PASS END=26533919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr2 26533920 . C . PASS END=26533923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 26533924 . T . PASS END=26533924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26533925 . A . PASS END=26533945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 26533946 . G . PASS END=26533946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 26533947 . G . PASS END=26533958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:26,0 chr2 26533959 . C . PASS END=26533959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:23,0 chr2 26533960 . T . PASS END=26534021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:25,0 chr2 26534022 . C . PASS END=26534023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr2 26534024 . A . PASS END=26534029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 26534030 . A . PASS END=26534030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr2 26534031 . G . PASS END=26534038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr2 26534039 . G . PASS END=26534039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 26534040 . G . PASS END=26534040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26534041 . T . PASS END=26534041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr2 26534042 . A . PASS END=26534064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:24,0 chr2 26534065 . G . PASS END=26534065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr2 26534066 . C . PASS END=26534072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 26534073 . G . PASS END=26534073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:21,0 chr2 26534074 . C . PASS END=26534081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,70,255:25,0 chr2 26534082 . G . PASS END=26534082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26534083 . C . PASS END=26534083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 26534084 . T . PASS END=26534085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 26534086 . C . PASS END=26534091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 26534092 . C . PASS END=26534092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26534093 . C . PASS END=26534099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,986:0,70,255:26,0 chr2 26534100 . G . PASS END=26534103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 26534104 . A . PASS END=26534105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 26534106 . T . PASS END=26534107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 26534108 . G . PASS END=26534108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 26534109 . G . PASS END=26534111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 26534112 . G . PASS END=26534112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 26534113 . C . PASS END=26534115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:29,0 chr2 26534116 . A . PASS END=26534116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:28,0 chr2 26534117 . G . PASS END=26534123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:31,0 chr2 26534124 . A . PASS END=26534124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 26534125 . G . PASS END=26534133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1117:0,93,255:31,0 chr2 26534134 . G . PASS END=26534134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 26534135 . C . PASS END=26534135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 26534136 . C . PASS END=26534137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 26534138 . G . PASS END=26534185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1155:0,80,255:40,0 chr2 26534186 . T . PASS END=26534186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:78:43:0,78,1157:0,78,255:39,0 chr2 26534187 . C . PASS END=26534315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:37:0,90,1275:0,95,255:40,0 chr2 26534316 . G . PASS END=26534316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:35,0 chr2 26534317 . G . PASS END=26534387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:37,0 chr2 26534388 . T . PASS END=26534399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1069:0,71,255:26,0 chr2 26534400 . T . PASS END=26534427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1147:0,87,255:30,0 chr2 26534428 . A . PASS END=26534428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:27,0 chr2 26534429 . A . PASS END=26534432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr2 26534433 . A . PASS END=26534433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,922:0,62,255:26,0 chr2 26534434 . C . PASS END=26534436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 26534437 . T . PASS END=26534440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1078:0,74,255:26,0 chr2 26534441 . C . PASS END=26534441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26534442 . C . PASS END=26534468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:25:0,63,945:0,65,255:26,0 chr2 26534469 . T . PASS END=26534469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 26534470 . G . PASS END=26534499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 26534500 . T . PASS END=26534500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 26534501 . G . PASS END=26534506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26534507 . A . PASS END=26534507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 26534508 . G . PASS END=26534513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr2 26534514 . G . PASS END=26534514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr2 26534515 . T . PASS END=26534524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 26534525 . T . PASS END=26534525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 26534526 . G . PASS END=26534526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr2 26534527 . A . PASS END=26534527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr2 26534528 . T . PASS END=26534528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 26534529 . G . PASS END=26534549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,937:0,62,255:26,0 chr2 26534550 . A . PASS END=26534550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:21,0 chr2 26534551 . G . PASS END=26534557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,900:0,61,255:22,0 chr2 26534558 . C . PASS END=26534558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:21,0 chr2 26534559 . A . PASS END=26534560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 26534561 . A . PASS END=26534561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 26534562 . G . PASS END=26534591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,846:0,65,255:26,0 chr2 26534592 . T . PASS END=26534592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,808:0,9,255:23,0 chr2 26534593 . G . PASS END=26534593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:22,0 chr2 26534594 . A . PASS END=26534637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,872:0,67,255:26,0 chr2 26534638 . C . PASS END=26534662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:30,0 chr2 26534663 . A . PASS END=26534665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 26534666 . G . PASS END=26534666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 26534667 . G . PASS END=26534690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:26:0,72,992:0,77,255:26,0 chr2 26534691 . A . PASS END=26534692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 26534693 . C . PASS END=26534693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr2 26534694 . C . PASS END=26534710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 26534711 . T . PASS END=26534721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 26534722 . A . PASS END=26534743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr2 26534744 . T . PASS END=26534745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 26534746 . G . PASS END=26534753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 26534754 . C . PASS END=26534754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26534755 . A . PASS END=26534758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 26534759 . G . PASS END=26534760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 26534761 . C . PASS END=26534763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26534764 . T . PASS END=26534764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 26534765 . G . PASS END=26534766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26534767 . A . PASS END=26534767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 26534768 . G . PASS END=26534773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26534774 . C . PASS END=26534777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26534778 . G . PASS END=26534788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1094:0,84,255:29,0 chr2 26534789 . A . PASS END=26534789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 26534790 . G . PASS END=26534800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 26534801 . G A, 142.37 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,15,0:0,17,0:92:180,95,0,280,280,280:255,96,0:0,0:1.4237e+02,9.2367e+01,0.0000e+00,2.7714e+02,3.1191e+02,2.8015e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,18:0,0,11,21 chr2 26534802 . G . PASS END=26534805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr2 26534806 . T . PASS END=26534806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr2 26534807 . G . PASS END=26534807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26534808 . T . PASS END=26534838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,787:0,61,255:26,0 chr2 26534839 . G . PASS END=26534842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:20,0 chr2 26534843 . G . PASS END=26534843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:20,0 chr2 26534844 . C . PASS END=26534849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,892:0,61,255:22,0 chr2 26534850 . A . PASS END=26534850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 26534851 . G . PASS END=26534851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26534852 . T . PASS END=26534878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:19,0 chr2 26534879 . G . PASS END=26534881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 26534882 . C . PASS END=26534883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:19,0 chr2 26534884 . A . PASS END=26534884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26534885 . G . PASS END=26534885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26534886 . G . PASS END=26534891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 26534892 . C . PASS END=26534896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 26534897 . A . PASS END=26534901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26534902 . G . PASS END=26534902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 26534903 . T . PASS END=26534903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,646:0,24,255:19,0 chr2 26534904 . G . PASS END=26534930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,543:0,45,255:19,0 chr2 26534931 . A . PASS END=26534934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 26534935 . A . PASS END=26534935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:12,0 chr2 26534936 . G . PASS END=26534942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 26535811 . C . PASS END=26535818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr2 26535819 . C . PASS END=26535821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 26535822 . T . PASS END=26535822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 26535823 . G . PASS END=26535868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,992:0,81,255:31,0 chr2 26535869 . T . PASS END=26535869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:27,0 chr2 26535870 . T . PASS END=26535929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1125:0,85,255:32,0 chr2 26535930 . G . PASS END=26535953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,68,255:26,0 chr2 26535954 . C . PASS END=26535954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 26535955 . C . PASS END=26535971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,900:0,69,255:24,0 chr2 26535972 . C . PASS END=26535972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 26535973 . C . PASS END=26535976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 26535977 . C . PASS END=26535981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 26535982 . C . PASS END=26535982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26535983 . T . PASS END=26535983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 26535984 . G . PASS END=26535986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26535987 . G . PASS END=26535990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 26536245 . C . PASS END=26536261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr2 26536262 . A . PASS END=26536272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 26536273 . C . PASS END=26536273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26536274 . T . PASS END=26536274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 26536275 . C . PASS END=26536276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26536277 . C . PASS END=26536298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 26536299 . C G, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,7,0:0,8,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,6:0,0,7,8 chr2 26536300 . G . PASS END=26536315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,620:0,45,255:17,0 chr2 26536316 . C . PASS END=26536317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 26536318 . G . PASS END=26536320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 26536321 . C . PASS END=26536330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:15:0,39,585:0,45,255:13,0 chr2 26536331 . T . PASS END=26536336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 26536337 . C . PASS END=26536366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,45,255:19,0 chr2 26536367 . C . PASS END=26536376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:21,0 chr2 26536377 . G . PASS END=26536377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26536378 . T . PASS END=26536381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 26536382 . C . PASS END=26536382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 26536383 . A . PASS END=26536394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr2 26536395 . A . PASS END=26536395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 26536396 . T . PASS END=26536410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr2 26536411 . G . PASS END=26536411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 26536412 . A . PASS END=26536413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 26536414 . G . PASS END=26536414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 26536415 . C . PASS END=26536416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr2 26536417 . T . PASS END=26536441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,676:0,57,255:19,0 chr2 26536628 . C . PASS END=26536633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:28,0 chr2 26536634 . T . PASS END=26536634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 26536635 . G . PASS END=26536761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1194:0,83,255:40,0 chr2 26536762 . A . PASS END=26536771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr2 26537282 . C . PASS END=26537290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:19,0 chr2 26537291 . C . PASS END=26537301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,739:0,62,255:25,0 chr2 26537302 . C . PASS END=26537305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26537306 . A . PASS END=26537306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr2 26537307 . G . PASS END=26537308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 26537309 . C . PASS END=26537309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 26537310 . C . PASS END=26537319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,994:0,81,255:35,0 chr2 26537320 . G . PASS END=26537320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 26537321 . C . PASS END=26537461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:35:0,91,1175:0,91,255:40,0 chr2 26537462 . C . PASS END=26537491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:39:0,90,1350:0,110,255:40,0 chr2 26538390 . C . PASS END=26538396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr2 26538397 . G . PASS END=26538401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 26538402 . G . PASS END=26538402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 26538403 . G . PASS END=26538428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:13,0 chr2 26538429 . C . PASS END=26538429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 26538430 . C . PASS END=26538436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 26538437 . T . PASS END=26538437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26538438 . G . PASS END=26538467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,559:0,44,255:19,0 chr2 26538468 . G . PASS END=26538471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 26538472 . C . PASS END=26538476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 26538477 . G . PASS END=26538508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,878:0,62,255:24,0 chr2 26538509 . A . PASS END=26538509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:23,0 chr2 26538510 . A . PASS END=26538511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:23,0 chr2 26538512 . C . PASS END=26538512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 26538513 . A . PASS END=26538513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 26538514 . G . PASS END=26538527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,825:0,61,255:26,0 chr2 26538528 . C . PASS END=26538528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 26538529 . C . PASS END=26538529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 26538530 . T . PASS END=26538531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 26538532 . C . PASS END=26538532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 26538533 . T . PASS END=26538536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 26538537 . T . PASS END=26538539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 26538540 . G . PASS END=26538541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26538542 . T . PASS END=26538542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:25,0 chr2 26538543 . G . PASS END=26538543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:25,0 chr2 26538544 . G . PASS END=26538551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,76,255:26,0 chr2 26538552 . G . PASS END=26538552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26538553 . G . PASS END=26538562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:27:0,71,1045:0,71,255:26,0 chr2 26538563 . T . PASS END=26538565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr2 26538566 . C . PASS END=26538570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26538571 . C . PASS END=26538571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:25,0 chr2 26538572 . A . PASS END=26538580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,955:0,67,255:26,0 chr2 26538581 . T . PASS END=26538595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:23,0 chr2 26538596 . A . PASS END=26538596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 26538597 . G . PASS END=26538599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 26538600 . T . PASS END=26538600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 26538601 . C . PASS END=26538602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 26538603 . C . PASS END=26538603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr2 26538604 . G . PASS END=26538604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 26538605 . G . PASS END=26538605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 26538606 . G . PASS END=26538617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 26538618 . G T, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=1.418;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:3,9,0:7,3,0:48:85,0,50,429,358,787:255,0,255:10,0:5.0000e+01,6.7304e-05,5.2606e+01,4.2919e+02,3.9242e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,3,9:6,4,4,8 chr2 26538619 . G . PASS END=26538623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 26538624 . T . PASS END=26538624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,739:0,30,255:18,0 chr2 26538625 . G . PASS END=26538635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:41:19:0,41,651:0,41,255:19,0 chr2 26539143 . C . PASS END=26539159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:24,0 chr2 26539160 . C . PASS END=26539160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 26539161 . A . PASS END=26539164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,914:0,62,255:25,0 chr2 26539165 . C . PASS END=26539261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,950:0,81,255:39,0 chr2 26539262 . T . PASS END=26539262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:34,0 chr2 26539263 . G . PASS END=26539277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:34,0 chr2 26539278 . A . PASS END=26539292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,81,255:26,0 chr2 26539293 . T . PASS END=26539293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,878:0,50,255:25,0 chr2 26539294 . C . PASS END=26539305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:26,0 chr2 26539306 . G . PASS END=26539316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:22:0,54,810:0,66,255:19,0 chr2 26539780 . C . PASS END=26539782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:26,0 chr2 26539783 . T . PASS END=26539798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 26539799 . A . PASS END=26539799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:27,0 chr2 26539800 . G . PASS END=26539804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:30,0 chr2 26539805 . A . PASS END=26539805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr2 26539806 . A G, 134.28 PASS DP=29;MQ=249.03;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,16,0:0,13,0:84:172,87,0,1116,87,1116:255,90,0:0,0:1.3428e+02,8.4279e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,10:0,0,14,15 chr2 26539807 . G . PASS END=26539813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1125:0,90,255:33,0 chr2 26539814 . T . PASS END=26539814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:32,0 chr2 26539815 . G . PASS END=26539843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1174:0,88,255:34,0 chr2 26539844 . A . PASS END=26539912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1125:0,80,255:38,0 chr2 26539913 . C . PASS END=26539923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,71,255:26,0 chr2 26540364 . C . PASS END=26540511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:43:0,96,1458:0,96,255:40,0 chr2 26540697 . C . PASS END=26540698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1016:0,71,255:26,0 chr2 26540699 . G . PASS END=26540701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26540702 . C . PASS END=26540702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:26,0 chr2 26540703 . C . PASS END=26540708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 26540709 . C . PASS END=26540709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 26540710 . T . PASS END=26540714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1048:0,90,255:30,0 chr2 26540715 . G . PASS END=26540715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 26540716 . C . PASS END=26540720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:31,0 chr2 26540721 . T . PASS END=26540721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr2 26540722 . G . PASS END=26540724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1111:0,93,255:31,0 chr2 26540725 . A . PASS END=26540725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 26540726 . T . PASS END=26540728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 26540729 . C . PASS END=26540730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 26540731 . T . PASS END=26540741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1188:0,83,255:32,0 chr2 26540742 . T . PASS END=26540742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:31,0 chr2 26540743 . C . PASS END=26540752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1202:0,96,255:32,0 chr2 26540753 . A . PASS END=26540757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:33:0,75,1125:0,86,255:26,0 chr2 26540758 . G . PASS END=26540762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:27,0 chr2 26540879 . C . PASS END=26540882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 26540883 . T . PASS END=26540884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 26540885 . C . PASS END=26540908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,853:0,62,255:26,0 chr2 26540909 . G . PASS END=26540914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 26540915 . G . PASS END=26540915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 26540916 . G . PASS END=26540958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1133:0,82,255:33,0 chr2 26540959 . A . PASS END=26540959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 26540960 . T . PASS END=26540973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1141:0,82,255:32,0 chr2 26540974 . A . PASS END=26540974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 26540975 . G . PASS END=26540980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 26540981 . G . PASS END=26540981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 26540982 . A . PASS END=26540986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 26540987 . T . PASS END=26540991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 26541740 . C . PASS END=26541740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:21,0 chr2 26541741 . T . PASS END=26541745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr2 26541746 . T . PASS END=26541746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 26541747 . T . PASS END=26541756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,925:0,72,255:25,0 chr2 26541757 . G . PASS END=26541758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 26541759 . T . PASS END=26541759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 26541760 . T . PASS END=26541760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 26541761 . T . PASS END=26541761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 26541762 . G . PASS END=26541899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1011:0,80,255:40,0 chr2 26541900 . G . PASS END=26541914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 26541915 . C . PASS END=26541915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr2 26541916 . A . PASS END=26541916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 26541917 . T . PASS END=26541917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 26568989 . C . PASS END=26569008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1174:0,96,255:37,0 chr2 26569009 . T . PASS END=26569009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr2 26569010 . T . PASS END=26569127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:30:0,81,1215:0,90,255:39,0 chr2 26569128 . G . PASS END=26569128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 26569129 . A . PASS END=26569134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 26569135 . T . PASS END=26569135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 26569136 . G . PASS END=26569139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr2 26569140 . G . PASS END=26569148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 26569149 . A . PASS END=26569150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:28:0,57,855:0,84,255:19,0 chr2 26569151 . G . PASS END=26569152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 26569153 . A . PASS END=26569157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,84,255:19,0 chr2 26587170 . T . PASS END=26587238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:51:0,120,1800:0,152,255:40,0 chr2 26587700 . G . PASS END=26587808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,146,255:40,0 chr2 26590014 . C . PASS END=26590088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:47:0,120,1800:0,139,255:40,0 chr2 26596235 . A . PASS END=26596235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,995:0,54,255:30,0 chr2 26596236 . T . PASS END=26596497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:31:0,84,1294:0,84,255:40,0 chr2 26597908 . A . PASS END=26598010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:37:0,95,1355:0,95,255:40,0 chr2 26598011 . T . PASS END=26598011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:31,0 chr2 26598012 . T . PASS END=26598016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,91,255:32,0 chr2 26606167 . G . PASS END=26606215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:92:0,120,1800:0,213,255:40,0 chr2 26607825 . A . PASS END=26607825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 26607827 . A . PASS END=26607954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:62:0,120,1800:0,169,255:40,0 chr2 26607955 . T . PASS END=26607991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,120,1800:0,135,255:40,0 chr2 26607992 . T C, 188.00 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,22,0:0,25,0:138:226,141,0,1778,141,1778:255,141,0:0,0:1.8800e+02,1.3800e+02,0.0000e+00,4.5000e+02,1.7277e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,30:0,0,28,19 chr2 26607993 . T . PASS END=26608002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:41:0,81,1215:0,123,255:39,0 chr2 26608003 . G . PASS END=26608007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:69:38:0,69,1035:0,114,255:24,0 chr2 26609222 . T . PASS END=26609394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:38:0,81,1215:0,95,255:40,0 chr2 26609395 . A . PASS END=26609404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,1080:0,66,255:26,0 chr2 26611873 . G . PASS END=26611971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,143,255:40,0 chr2 26624858 . A . PASS END=26624899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,837:0,69,255:26,0 chr2 26624900 . G . PASS END=26624900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26624901 . A . PASS END=26624905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26624906 . C . PASS END=26624946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1172:0,87,255:31,0 chr2 26624947 . C . PASS END=26624959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,74,255:25,0 chr2 26624960 . C . PASS END=26625004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,675:0,41,255:20,0 chr2 26625005 . C . PASS END=26625008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 26625009 . G . PASS END=26625009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 26625010 . G . PASS END=26625012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 26637212 . G . PASS END=26637299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,107,1582:0,107,255:40,0 chr2 26644156 . A . PASS END=26644268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:35:0,82,1116:0,82,255:40,0 chr2 26644271 . A . PASS END=26644271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr2 26647139 . G . PASS END=26647239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,125,255:40,0 chr2 26647240 . T . PASS END=26647275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:41:0,81,1215:0,123,255:40,0 chr2 26647276 . C . PASS END=26647276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:41:0,75,1125:0,123,255:25,0 chr2 26647277 . T G, 163.92 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,19,0:0,20,0:114:202,117,0,1475,117,1475:255,117,0:0,0:1.6392e+02,1.1392e+02,0.0000e+00,4.5000e+02,1.4869e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,28:0,0,17,22 chr2 26647278 . G . PASS END=26647281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:39:0,72,1080:0,117,255:25,0 chr2 26647282 . T . PASS END=26647282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,968:0,45,255:24,0 chr2 26647283 . C . PASS END=26647305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,917:0,72,255:25,0 chr2 26647306 . T . PASS END=26647314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 26647315 . T . PASS END=26647322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 26652496 . G . PASS END=26652497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1085:0,90,255:30,0 chr2 26652498 . G . PASS END=26652500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 26652501 . A . PASS END=26652502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr2 26652503 . A . PASS END=26652504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 26652505 . A . PASS END=26652512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 26652513 . T . PASS END=26652514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:28,0 chr2 26652515 . A . PASS END=26652515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr2 26652516 . C . PASS END=26652516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 26652517 . C . PASS END=26652523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:32,0 chr2 26652524 . T . PASS END=26652524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr2 26652525 . G . PASS END=26652531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1205:0,86,255:34,0 chr2 26652532 . T . PASS END=26652532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:32,0 chr2 26652533 . T . PASS END=26652591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1115:0,86,255:37,0 chr2 26652592 . A . PASS END=26652592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:31,0 chr2 26652593 . A . PASS END=26652614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,86,255:33,0 chr2 26652615 . G . PASS END=26652631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:26,0 chr2 26652632 . A . PASS END=26652633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 26653654 . A . PASS END=26653740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:31:0,86,1016:0,86,255:40,0 chr2 26653746 . G . PASS END=26653746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1215:0,90,255:26,0 chr2 26654752 . C . PASS END=26654860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1101:0,80,255:40,0 chr2 26654861 . A . PASS END=26654874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,87,255:26,0 chr2 26663246 . A . PASS END=26663256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,152,255:40,0 chr2 26663257 . G . PASS END=26663385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:52:0,120,1800:0,128,255:40,0 chr2 26667089 . G . PASS END=26667224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:60:0,120,1800:0,164,255:40,0 chr2 26667584 . G . PASS END=26667614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,103,1330:0,103,255:40,0 chr2 26667615 . T C, 181.04 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,19,0:0,26,0:131:219,134,0,319,319,319:255,135,0:0,0:1.8104e+02,1.3104e+02,0.0000e+00,3.1581e+02,3.5058e+02,3.1882e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,26:0,0,23,22 chr2 26667616 . G . PASS END=26667652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,135,255:40,0 chr2 26667653 . C . PASS END=26667813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:30:0,80,1155:0,80,255:40,0 chr2 26667814 . C . PASS END=26667816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 26671559 . A . PASS END=26671581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:42:0,110,1512:0,110,255:40,0 chr2 26671582 . G . PASS END=26671671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,105,1520:0,109,255:40,0 chr2 26672864 . G . PASS END=26672864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 26672865 . G . PASS END=26672865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,984:0,32,255:27,0 chr2 26672866 . G . PASS END=26672943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1100:0,80,255:38,0 chr2 26672944 . C . PASS END=26672954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,74,255:26,0 chr2 26673460 . G . PASS END=26673549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,124,255:40,0 chr2 26676188 . A . PASS END=26676192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 26676193 . G . PASS END=26676193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:11,0 chr2 26676194 . C . PASS END=26676206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 26676207 . C . PASS END=26676208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 26676209 . A . PASS END=26676212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 26676213 . T . PASS END=26676225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:19,0 chr2 26676226 . C . PASS END=26676284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,751:0,60,255:26,0 chr2 26676285 . G . PASS END=26676300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 26676301 . C . PASS END=26676301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 26676302 . C . PASS END=26676321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:25,0 chr2 26676322 . A G, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,959,75,959:255,75,0:0,0:1.2224e+02,7.2240e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,7:0,0,11,14 chr2 26676323 . G . PASS END=26676327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 26676328 . G . PASS END=26676328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 26676329 . G . PASS END=26676331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:24,0 chr2 26676332 . G . PASS END=26676332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:30:26:0,30,742:0,30,255:21,0 chr2 26676333 . A . PASS END=26676333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 26676334 . G . LowGQ END=26676334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,621:28,0,255:19,0 chr2 26676335 . A . PASS END=26676341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 26676342 . C . PASS END=26676342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 26676343 . C . PASS END=26676349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 26676350 . T . PASS END=26676351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 26676352 . G . PASS END=26676359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,62,255:20,0 chr2 26676360 . A . PASS END=26676361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26676362 . C . PASS END=26676405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,615:0,44,255:18,0 chr2 26676406 . G . PASS END=26676406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:14,0 chr2 26676407 . A . PASS END=26676409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,630:0,41,255:15,0 chr2 26676410 . A . PASS END=26676417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,495:0,31,255:13,0 chr2 26677515 . G . PASS END=26677649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:38:0,87,1305:0,98,255:40,0 chr2 26677650 . G . PASS END=26677651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:34:0,75,1125:0,102,255:26,0 chr2 26677652 . A . PASS END=26677654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr2 26677655 . A . PASS END=26677658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:34:0,69,1035:0,89,255:25,0 chr2 26677999 . C . PASS END=26678006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:34,0 chr2 26678007 . T . PASS END=26678007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:33,0 chr2 26678008 . G . PASS END=26678021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1196:0,85,255:35,0 chr2 26678022 . A . PASS END=26678022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1223:0,75,255:32,0 chr2 26678023 . G . PASS END=26678055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1241:0,89,255:35,0 chr2 26678056 . G . PASS END=26678058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr2 26678059 . C . PASS END=26678059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 26678060 . A . PASS END=26678061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 26678062 . A . PASS END=26678062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:25,0 chr2 26678063 . G . PASS END=26678071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr2 26678072 . G . PASS END=26678074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 26678075 . C . PASS END=26678075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 26678076 . T . PASS END=26678090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr2 26678091 . T . PASS END=26678101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr2 26679329 . A . PASS END=26679385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,116,1635:0,116,255:40,0 chr2 26680170 . C . PASS END=26680170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 26680208 . G . PASS END=26680208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 26680239 . G . PASS END=26680239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 26680294 . G . PASS END=26680294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 26680336 . A . PASS END=26680337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr2 26680392 . T . PASS END=26680392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 26680496 . G . PASS END=26680496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 26680632 . G . PASS END=26680632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 26680666 . A . PASS END=26680666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 26680758 . C . PASS END=26680758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 26680765 . C . PASS END=26680765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 26680908 . T . PASS END=26681071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:34:0,87,1305:0,102,255:40,0 chr2 26681072 . A . PASS END=26681072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:26,0 chr2 26681073 . G . PASS END=26681085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1141:0,90,255:30,0 chr2 26681086 . C . PASS END=26681086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:28,0 chr2 26681087 . G . PASS END=26681088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 26681092 . G . PASS END=26681092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26682893 . T . PASS END=26683032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:36:0,89,1321:0,89,255:40,0 chr2 26683033 . T . PASS END=26683033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:30,0 chr2 26683034 . G . PASS END=26683059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1225:0,89,255:33,0 chr2 26683060 . T . PASS END=26683065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 26683066 . C . PASS END=26683066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 26683067 . G . PASS END=26683073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 26683515 . T . PASS END=26683517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr2 26683518 . G . PASS END=26683615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:83:29:0,83,1188:0,83,255:40,0 chr2 26683617 . T . PASS END=26683617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 26683719 . C . PASS END=26683739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:37:0,80,1092:0,80,255:38,0 chr2 26683740 . T . PASS END=26683740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1248:0,70,255:36,0 chr2 26683741 . C . PASS END=26683847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1109:0,82,255:40,0 chr2 26683848 . T . PASS END=26683848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:27,0 chr2 26683849 . G . PASS END=26683853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:28,0 chr2 26683854 . T . PASS END=26683854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:26,0 chr2 26683855 . C . PASS END=26683856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 26683857 . T . PASS END=26683857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr2 26683858 . T . PASS END=26683858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:26,0 chr2 26683859 . G . PASS END=26683859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26683860 . C . PASS END=26683861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 26683862 . C . PASS END=26683862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr2 26683863 . C . PASS END=26683863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26683864 . C . PASS END=26683864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr2 26683865 . C . PASS END=26683865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26683866 . G . PASS END=26683866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 26683867 . C . PASS END=26683867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,892:0,29,255:25,0 chr2 26683868 . G . PASS END=26683868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:26,0 chr2 26683869 . G . PASS END=26683870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:26,0 chr2 26683871 . A . PASS END=26683872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:27:0,50,922:0,50,255:25,0 chr2 26683873 . C . PASS END=26683873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,70,255:22,0 chr2 26683874 . C . PASS END=26683874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,877:0,40,255:21,0 chr2 26683875 . G . PASS END=26683876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr2 26683877 . T . PASS END=26683877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:21,0 chr2 26683878 . T . PASS END=26683879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,71,255:22,0 chr2 26683880 . A . PASS END=26683880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,958:0,56,255:22,0 chr2 26683881 . G . PASS END=26683882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:23,0 chr2 26683883 . T . PASS END=26683883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,931:0,32,255:22,0 chr2 26683884 . C . PASS END=26683885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,917:0,64,255:23,0 chr2 26683886 . A . PASS END=26683886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:23,0 chr2 26683887 . G . PASS END=26683887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,806:0,28,255:21,0 chr2 26683888 . C . PASS END=26683888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:6:25:0,6,770:0,6,255:21,0 chr2 26683889 . T . PASS END=26683889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 26683890 . C . PASS END=26683893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:20:25:0,20,768:0,20,255:21,0 chr2 26683894 . G . PASS END=26683895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,80,255:22,0 chr2 26683896 . C . PASS END=26683896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,922:0,34,255:21,0 chr2 26683897 . C . PASS END=26683897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:21,0 chr2 26683898 . C . PASS END=26683898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,859:0,31,255:20,0 chr2 26683900 . T . PASS END=26683900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,840:0,61,255:22,0 chr2 26684564 . C . PASS END=26684570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 26684571 . G . PASS END=26684571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr2 26684572 . T . PASS END=26684577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 26684578 . G . PASS END=26684578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 26684579 . C . PASS END=26684583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 26684584 . A . PASS END=26684584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 26684585 . A . PASS END=26684586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 26684587 . T . PASS END=26684587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr2 26684588 . G . PASS END=26684589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:25,0 chr2 26684590 . T . PASS END=26684590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr2 26684591 . C . PASS END=26684593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 26684594 . C . PASS END=26684595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26684596 . T . PASS END=26684596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:28,2 chr2 26684597 . C . PASS END=26684597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,992:0,10,255:29,2 chr2 26684598 . C . PASS END=26684598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:30,0 chr2 26684599 . C . PASS END=26684613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1127:0,93,255:33,0 chr2 26684614 . A . PASS END=26684614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1228:0,72,255:32,0 chr2 26684615 . G . PASS END=26684769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1260:0,89,255:40,0 chr2 26684770 . G . PASS END=26684773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr2 26684774 . C . PASS END=26684782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 26684783 . C . PASS END=26684801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 26684802 . C . PASS END=26684802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 26684803 . C . PASS END=26684803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 26684804 . A . PASS END=26684804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 26684805 . C . PASS END=26684805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 26684814 . G . PASS END=26684814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26684951 . C . PASS END=26684987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:37:0,90,1354:0,90,255:40,0 chr2 26684988 . A . PASS END=26684988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:40,0 chr2 26684989 . G . PASS END=26685050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:38:0,99,1377:0,104,255:40,0 chr2 26685058 . A . PASS END=26685058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:34:0,69,1035:0,86,255:23,0 chr2 26686351 . T . PASS END=26686373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,923:0,62,255:26,0 chr2 26686374 . G . PASS END=26686404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1225:0,86,255:32,0 chr2 26686405 . A . PASS END=26686405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 26686406 . T . PASS END=26686411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 26686412 . A . PASS END=26686434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 26686435 . C . PASS END=26686439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 26686830 . A . PASS END=26686830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 26686832 . C . PASS END=26686832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 26686833 . T . PASS END=26686847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,911:0,75,255:26,0 chr2 26686848 . T . PASS END=26686848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 26686849 . T . PASS END=26686849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 26686850 . G . PASS END=26686964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:28:0,83,1041:0,83,255:39,0 chr2 26686965 . T . PASS END=26686974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr2 26687736 . C . PASS END=26687739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 26687740 . T . PASS END=26687740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr2 26687741 . C . PASS END=26687746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr2 26687747 . C . LowGQ END=26687747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,388:2,0,255:13,0 chr2 26687748 . T . PASS END=26687773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,552:0,48,255:17,0 chr2 26687774 . G . PASS END=26687775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,545:0,15,255:17,0 chr2 26687776 . G . PASS END=26687776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 26687777 . G . PASS END=26687816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,644:0,43,255:19,0 chr2 26687817 . C . PASS END=26687832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,656:0,60,255:21,0 chr2 26687833 . C . PASS END=26687872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:19,0 chr2 26687873 . G . PASS END=26687891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 26687892 . C . PASS END=26687892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 26687893 . C . PASS END=26687893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 26687894 . A . PASS END=26687897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26687908 . G . PASS END=26687908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 26688539 . C . PASS END=26688542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 26688543 . G . PASS END=26688624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:31:0,90,1350:0,93,255:40,0 chr2 26688625 . G . PASS END=26688661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:45:0,96,1576:0,96,255:40,0 chr2 26688662 . C T, 49.97 PASS DP=43;MQ=250.00;MQRankSum=5.600;ReadPosRankSum=1.956;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,21,0:0.488,0.000:43:13,13,0:9,8,0:48:85,0,50,722,721,1444:255,0,255:22,0:4.9970e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,7,10,11:14,8,10,11 chr2 26688663 . A . PASS END=26688691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1158:0,88,255:40,0 chr2 26688692 . G . PASS END=26688692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1203:0,74,255:27,0 chr2 26688693 . G . PASS END=26688699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 26688700 . T . PASS END=26688700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 26688701 . G . PASS END=26688706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 26688707 . G . PASS END=26688707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:27,0 chr2 26688708 . G . PASS END=26688710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:29,0 chr2 26688812 . C . PASS END=26688812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 26688817 . T . PASS END=26688821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 26688822 . A . PASS END=26688822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 26688823 . A . PASS END=26688826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr2 26688827 . C . PASS END=26688827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:28,0 chr2 26688828 . A . PASS END=26688828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 26688829 . G . PASS END=26688836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1172:0,83,255:32,0 chr2 26688837 . C . PASS END=26688837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:31,0 chr2 26688838 . T . PASS END=26688846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:34,0 chr2 26688847 . A . PASS END=26688847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1252:0,75,255:35,0 chr2 26688848 . T . PASS END=26688923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:33:0,84,955:0,85,255:40,0 chr2 26688924 . A . PASS END=26688944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:21:0,60,900:0,63,255:26,0 chr2 26689580 . A . PASS END=26689580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 26689582 . C . PASS END=26689588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,821:0,66,255:24,0 chr2 26689589 . A . PASS END=26689594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:32,0 chr2 26689595 . A . PASS END=26689595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr2 26689596 . C . PASS END=26689696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:31:0,83,1158:0,83,255:40,0 chr2 26689697 . A . PASS END=26689697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 26689698 . C . PASS END=26689705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 26689706 . A . PASS END=26689706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 26689707 . C . PASS END=26689707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26689708 . G . PASS END=26689719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,976:0,68,255:25,0 chr2 26689725 . C . PASS END=26689725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 26689966 . C . PASS END=26689966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 26689967 . C . PASS END=26689974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,815:0,69,255:24,0 chr2 26689975 . G . PASS END=26689981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:31,0 chr2 26689982 . A . PASS END=26689982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 26689983 . A . PASS END=26690003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:32:0,93,1395:0,96,255:40,0 chr2 26690004 . C . PASS END=26690004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1254:0,67,255:38,0 chr2 26690005 . C . PASS END=26690055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,106,1369:0,106,255:40,0 chr2 26690056 . A . PASS END=26690056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:38,0 chr2 26690057 . G . PASS END=26690097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:37:0,80,1113:0,80,255:39,0 chr2 26690098 . A . PASS END=26690098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:29,0 chr2 26690099 . T . PASS END=26690102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1227:0,91,255:33,0 chr2 26690228 . C . PASS END=26690228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1272:0,92,255:34,0 chr2 26690232 . C . PASS END=26690232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1213:0,91,255:32,0 chr2 26690233 . C . PASS END=26690233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr2 26690234 . T . PASS END=26690250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1193:0,83,255:32,0 chr2 26690251 . G . PASS END=26690251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1001:0,63,255:29,0 chr2 26690252 . G . PASS END=26690264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1089:0,93,255:33,0 chr2 26690265 . C . PASS END=26690265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:31,0 chr2 26690266 . G . PASS END=26690302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1152:0,83,255:35,0 chr2 26690303 . G . PASS END=26690303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:31,0 chr2 26690304 . T . PASS END=26690317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1234:0,91,255:35,0 chr2 26690318 . T . PASS END=26690318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:33,0 chr2 26690319 . C . PASS END=26690337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1166:0,85,255:34,0 chr2 26690338 . C . PASS END=26690340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1014:0,60,255:30,1 chr2 26690341 . C . PASS END=26690343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 26690344 . C . PASS END=26690352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:24,0 chr2 26690353 . C . PASS END=26690354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 26690355 . T . PASS END=26690357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26690358 . A . PASS END=26690369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:42:29:0,42,630:0,77,255:17,0 chr2 26691276 . C . PASS END=26691342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:36:0,92,1286:0,92,255:40,0 chr2 26693460 . C . PASS END=26693551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,119,1800:0,119,255:40,1 chr2 26693552 . C . PASS END=26693552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,7:58:25:58:0,25,1605:0,25,255:40,1 chr2 26693553 . C . PASS END=26693553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:14:56:0,14,1581:0,14,255:40,6 chr2 26693554 . C . LowGQ END=26693556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:0:59:0,0,1627:28,0,255:40,6 chr2 26693557 . C . PASS END=26693589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:55:0,82,1793:0,82,255:40,0 chr2 26693989 . C . PASS END=26694018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:34:0,95,1215:0,95,255:36,0 chr2 26694020 . T . PASS END=26694020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 26694030 . C . PASS END=26694030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 26695333 . T . PASS END=26695393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,980:0,81,255:35,0 chr2 26695394 . A . PASS END=26695394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 26695395 . G . PASS END=26695401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26695402 . C . PASS END=26695402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 26695403 . A . PASS END=26695407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 26695408 . C . PASS END=26695408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 26695409 . T . PASS END=26695410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 26695411 . C . PASS END=26695445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr2 26695446 . C . PASS END=26695446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 26695447 . C . PASS END=26695447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 26695448 . A . PASS END=26695448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 26695449 . C . PASS END=26695454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr2 26695455 . C . PASS END=26695456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 26695457 . C . PASS END=26695458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:21,0 chr2 26695459 . T . PASS END=26695483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:19:0,42,630:0,47,255:19,0 chr2 26695484 . T . PASS END=26695501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,450:0,33,255:12,0 chr2 26695502 . C . PASS END=26695517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,349:0,27,255:9,0 chr2 26695527 . T . PASS END=26695527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 26696000 . C . PASS END=26696001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 26696002 . G . PASS END=26696053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,715:0,60,255:26,0 chr2 26696054 . G . PASS END=26696055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 26696056 . A . PASS END=26696058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 26696059 . G . PASS END=26696064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 26696065 . A . PASS END=26696065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 26696066 . C . PASS END=26696072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 26696073 . G . PASS END=26696096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr2 26696097 . G . PASS END=26696097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr2 26696098 . A . PASS END=26696100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 26696101 . G . PASS END=26696105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26696106 . G . PASS END=26696121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:18,0 chr2 26696122 . A . PASS END=26696136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr2 26696137 . T . PASS END=26696147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 26696148 . G . LowGQ END=26696148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr2 26696149 . T . PASS END=26696149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 26696150 . T . PASS END=26696150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 26696151 . C . PASS END=26696157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 26696158 . A . PASS END=26696162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:11:0,15,225:0,33,255:6,0 chr2 26696164 . T . PASS END=26696164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 26696168 . G . PASS END=26696168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 26696274 . C . PASS END=26696275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 26696276 . C . PASS END=26696276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 26696277 . T . PASS END=26696277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 26696278 . T . PASS END=26696278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 26696279 . C . PASS END=26696281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 26696282 . A . PASS END=26696282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,659:0,47,255:25,0 chr2 26696283 . C . PASS END=26696286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr2 26696287 . T . PASS END=26696287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,886:0,51,255:26,0 chr2 26696288 . T . PASS END=26696288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr2 26696289 . G . PASS END=26696290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26696291 . C . PASS END=26696295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 26696296 . G . PASS END=26696298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 26696299 . T . PASS END=26696299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr2 26696300 . T . PASS END=26696419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1080:0,83,255:36,0 chr2 26696420 . G . PASS END=26696435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr2 26696437 . T . PASS END=26696437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 26696854 . C . PASS END=26696854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 26696859 . C . PASS END=26696882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:26,0 chr2 26696883 . G . PASS END=26696883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr2 26696884 . G . PASS END=26696884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26696885 . G . PASS END=26696901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1133:0,80,255:35,0 chr2 26696902 . A . PASS END=26696903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:34,0 chr2 26696904 . G . PASS END=26696940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1224:0,83,255:35,0 chr2 26696941 . T . PASS END=26696942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:29,0 chr2 26696943 . G . PASS END=26696949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 26696950 . G . PASS END=26696950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 26696951 . G . PASS END=26696951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26696952 . C . PASS END=26696953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 26696954 . G . PASS END=26696961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 26696962 . T . PASS END=26696978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,868:0,61,255:25,0 chr2 26697381 . C . PASS END=26697398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 26697399 . C . PASS END=26697408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr2 26697409 . T . PASS END=26697409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr2 26697410 . C . PASS END=26697435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,574:0,48,255:19,0 chr2 26697436 . A . PASS END=26697436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26697437 . T . PASS END=26697437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 26697438 . C . PASS END=26697438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26697439 . T . PASS END=26697439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,662:0,36,255:20,0 chr2 26697440 . G . PASS END=26697465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr2 26697466 . C . PASS END=26697466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 26697467 . G . PASS END=26697506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:25,0 chr2 26697507 . T . PASS END=26697518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 26697519 . C . PASS END=26697519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26697520 . C . PASS END=26697520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 26697521 . G . PASS END=26697521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26697522 . G . PASS END=26697542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 26697547 . C . PASS END=26697547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 26698227 . C . PASS END=26698234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1119:0,90,255:32,0 chr2 26698235 . C . PASS END=26698235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr2 26698236 . C . PASS END=26698339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1188:0,80,255:40,0 chr2 26698340 . G . PASS END=26698340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1224:0,58,255:28,0 chr2 26698341 . A . PASS END=26698350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:29,0 chr2 26698351 . T . PASS END=26698357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1125:0,76,255:26,0 chr2 26698358 . G . PASS END=26698361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:26,0 chr2 26698375 . T . PASS END=26698375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:30:0,48,720:0,90,255:16,0 chr2 26698780 . A . PASS END=26698884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,88,255:40,0 chr2 26698885 . C . PASS END=26698894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr2 26698895 . A . PASS END=26698895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26698896 . C . PASS END=26698906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 26698996 . T . PASS END=26698996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 26698997 . G . PASS END=26699026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,653:0,54,255:19,0 chr2 26699027 . A . PASS END=26699027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 26699028 . T . PASS END=26699032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26699033 . G . PASS END=26699036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26699037 . A . PASS END=26699037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26699038 . G . PASS END=26699045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 26699046 . G . PASS END=26699071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr2 26699072 . G . PASS END=26699078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 26699079 . C . PASS END=26699079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 26699080 . C . PASS END=26699082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 26699083 . A . PASS END=26699083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 26699084 . C . PASS END=26699084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr2 26699085 . A . PASS END=26699088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26699089 . A . PASS END=26699125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,675:0,41,255:19,0 chr2 26699126 . C G, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.742;ReadPosRankSum=2.381;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:4,6,0:6,4,0:48:85,0,50,358,358,715:255,0,255:8,0:5.0000e+01,6.5233e-05,5.3000e+01,3.5770e+02,3.9240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,5,5:5,5,7,3 chr2 26699127 . A . PASS END=26699132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr2 26699133 . A . PASS END=26699133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26699134 . C . PASS END=26699134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 26699135 . C . PASS END=26699135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26699136 . T . PASS END=26699137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26699138 . G . PASS END=26699144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 26699145 . A . PASS END=26699158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,729:0,57,255:19,0 chr2 26699159 . C T, 49.09 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=2.849;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:4,6,0:7,2,0:48:84,0,50,286,365,651:253,0,255:11,0:4.9088e+01,7.5329e-05,5.3000e+01,2.8615e+02,3.9935e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,8,4,4:8,3,6,2 chr2 26699160 . G . PASS END=26699185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,668:0,57,255:19,0 chr2 26699187 . T . PASS END=26699187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 26699749 . C . PASS END=26699749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 26699759 . C . PASS END=26699768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1174:0,88,255:34,0 chr2 26699769 . A . PASS END=26699769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:33,0 chr2 26699770 . G . PASS END=26699771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 26699772 . G . PASS END=26699774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 26699775 . T . PASS END=26699775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1291:0,78,255:38,0 chr2 26699776 . T . PASS END=26699813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:39:0,96,1540:0,96,255:40,0 chr2 26699814 . A . PASS END=26699814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:65:45:0,65,1470:0,65,255:38,0 chr2 26699815 . T . PASS END=26699818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1507:0,93,255:40,0 chr2 26699819 . G . PASS END=26699819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:39,0 chr2 26699820 . A . PASS END=26699821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1469:0,93,255:40,0 chr2 26699822 . G A, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=1.563;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,24,0:0.571,0.000:42:9,13,0:9,11,0:47:85,0,48,821,558,1379:255,0,255:18,0:5.0000e+01,7.7917e-05,5.1017e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,14,10:11,7,11,13 chr2 26699823 . A . PASS END=26699823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1388:0,57,255:39,0 chr2 26699824 . G . PASS END=26699824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1459:0,74,255:40,0 chr2 26699825 . C . PASS END=26699863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:41:0,90,1425:0,90,255:40,0 chr2 26699864 . G . PASS END=26699864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1369:0,74,255:35,0 chr2 26699865 . T . PASS END=26699872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,101,1372:0,101,255:38,0 chr2 26699873 . C . PASS END=26699877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1349:0,98,255:37,0 chr2 26699878 . T . PASS END=26699878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1272:0,67,255:33,0 chr2 26699879 . C . PASS END=26699879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 26699880 . C . PASS END=26699880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1213:0,67,255:33,0 chr2 26699881 . A . PASS END=26699887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1227:0,81,255:36,0 chr2 26699888 . G . PASS END=26699888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:33,0 chr2 26699889 . A . PASS END=26699892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1258:0,94,255:36,0 chr2 26699893 . C . PASS END=26699893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:35,0 chr2 26699894 . G . PASS END=26699905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1215:0,81,255:34,0 chr2 26699906 . C . PASS END=26699906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1045:0,52,255:26,0 chr2 26699907 . T . PASS END=26699907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1074:0,60,255:27,0 chr2 26699908 . G . PASS END=26699910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 26699911 . G . PASS END=26699911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr2 26700035 . C . PASS END=26700035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 26700040 . C . PASS END=26700091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1164:0,93,255:33,0 chr2 26700092 . T . PASS END=26700101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 26700102 . C . PASS END=26700104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr2 26700105 . T . PASS END=26700105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 26700106 . G . PASS END=26700126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr2 26700127 . C . PASS END=26700144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 26700145 . C . PASS END=26700145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 26700146 . C . PASS END=26700156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 26700284 . C . PASS END=26700355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,99,1374:0,101,255:40,0 chr2 26700356 . A . PASS END=26700356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:32,0 chr2 26700357 . G . PASS END=26700363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:32,0 chr2 26700364 . A . PASS END=26700364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1164:0,28,255:30,0 chr2 26700365 . G . PASS END=26700369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1227:0,88,255:30,0 chr2 26700370 . A . PASS END=26700370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:11:35:0,11,1078:0,11,255:30,0 chr2 26700371 . G . PASS END=26700372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 26700373 . G . PASS END=26700374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr2 26700517 . C . PASS END=26700546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,908:0,61,255:26,0 chr2 26700547 . C . PASS END=26700548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 26700549 . C . PASS END=26700549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:26,0 chr2 26700550 . C . PASS END=26700559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr2 26700560 . G . PASS END=26700560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 26700561 . C . PASS END=26700561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:27,0 chr2 26700562 . T . PASS END=26700564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 26700565 . G . PASS END=26700593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1134:0,93,255:32,0 chr2 26700594 . C . PASS END=26700594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:30,0 chr2 26700595 . T . PASS END=26700632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1233:0,89,255:34,0 chr2 26700633 . G . PASS END=26700633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 26700634 . T . PASS END=26700651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:31,0 chr2 26700652 . A . PASS END=26700652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 26700653 . G . PASS END=26700656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 26700657 . C . PASS END=26700658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 26700659 . C . PASS END=26700661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr2 26700662 . C . PASS END=26700662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 26700663 . C . PASS END=26700667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26700668 . C . PASS END=26700670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 26700671 . C . PASS END=26700675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26700676 . A . PASS END=26700693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,923:0,67,255:26,0 chr2 26700694 . A . PASS END=26700694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:18,0 chr2 26700695 . T . PASS END=26700695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:19,0 chr2 26700696 . C . PASS END=26700699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,61,255:19,0 chr2 26700700 . G A, 50.00 PASS DP=25;MQ=249.12;MQRankSum=3.586;ReadPosRankSum=1.013;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:4,9,0:7,5,0:48:85,0,49,482,393,875:255,0,255:9,0:5.0000e+01,6.9375e-05,5.2216e+01,4.5000e+02,4.2750e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,4,10:5,6,7,7 chr2 26700701 . G . PASS END=26700704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 26700705 . G . PASS END=26700707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 26700708 . G . PASS END=26700708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr2 26700709 . G . PASS END=26700726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,660:0,41,255:19,0 chr2 26700727 . C . PASS END=26700728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr2 26700729 . C . PASS END=26700737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,668:0,54,255:18,0 chr2 26700738 . G . PASS END=26700740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 26700741 . A . PASS END=26700741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr2 26700742 . T . PASS END=26700742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 26700743 . C . PASS END=26700743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:15,0 chr2 26700744 . C . PASS END=26700745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 26700746 . G . PASS END=26700746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:13,0 chr2 26700747 . A . PASS END=26700747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:13,0 chr2 26700748 . G . PASS END=26700751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 26700752 . C . PASS END=26700758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 26700759 . C . PASS END=26700760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 26700761 . T . PASS END=26700761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26702131 . C . PASS END=26702135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 26702136 . T . PASS END=26702136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 26702137 . T . PASS END=26702144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 26702145 . A . PASS END=26702146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr2 26702147 . G . PASS END=26702147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 26702148 . T . PASS END=26702148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 26702149 . G . PASS END=26702152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:16,0 chr2 26702153 . C . PASS END=26702153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr2 26702154 . A . PASS END=26702154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 26702155 . T . PASS END=26702165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,537:0,48,255:18,0 chr2 26702166 . T . PASS END=26702166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 26702167 . T . PASS END=26702167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 26702168 . G . PASS END=26702171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 26702172 . A . PASS END=26702175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,729:0,47,255:19,0 chr2 26702176 . G . PASS END=26702176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26702177 . G . PASS END=26702187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr2 26702188 . C . PASS END=26702208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,654:0,60,255:20,0 chr2 26702209 . A . PASS END=26702234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:19,0 chr2 26702235 . G . PASS END=26702235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 26702236 . G . PASS END=26702243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,674:0,54,255:18,0 chr2 26702244 . A . PASS END=26702244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr2 26702245 . A . PASS END=26702252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,605:0,40,255:16,0 chr2 26702341 . C . PASS END=26702355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 26702356 . G . PASS END=26702366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr2 26702367 . T . PASS END=26702368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 26702369 . G . PASS END=26702376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 26702377 . G . PASS END=26702377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 26702378 . A . PASS END=26702387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 26702388 . C . PASS END=26702402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,327:0,27,255:9,0 chr2 26702403 . A . PASS END=26702432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 26702433 . C . PASS END=26702436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 26702437 . T . PASS END=26702437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr2 26702438 . C . PASS END=26702454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 26702455 . C . PASS END=26702476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,172:0,15,172:6,0 chr2 26702477 . G . LowGQ END=26702477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 26702478 . C . PASS END=26702521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr2 26703071 . C . PASS END=26703179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:40:0,81,1215:0,93,255:40,0 chr2 26703641 . C . PASS END=26703641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 26703643 . T . PASS END=26703643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 26703654 . C . PASS END=26703662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 26703663 . G . PASS END=26703674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 26703675 . C . PASS END=26703675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 26703676 . T . PASS END=26703771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr2 26703772 . C . PASS END=26703809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr2 26703810 . C . PASS END=26703810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 26703811 . A . PASS END=26703834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 26703835 . C . PASS END=26703847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:13:0,33,495:0,39,255:13,0 chr2 26703848 . C . PASS END=26703877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,233:0,21,233:9,0 chr2 26705265 . G . PASS END=26705265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 26705274 . C . PASS END=26705303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:18,0 chr2 26705304 . G . PASS END=26705318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:24,0 chr2 26705319 . T . PASS END=26705319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 26705320 . G . PASS END=26705345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:25:0,67,911:0,67,255:26,0 chr2 26705346 . C . PASS END=26705347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 26705348 . G . PASS END=26705350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26705351 . T . PASS END=26705379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,947:0,84,255:30,0 chr2 26705380 . G . PASS END=26705381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 26705382 . G . PASS END=26705382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26705383 . T . PASS END=26705383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 26705384 . G . PASS END=26705397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 26705398 . T . PASS END=26705408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1078:0,77,255:26,0 chr2 26705409 . C . PASS END=26705414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 26705415 . C . PASS END=26705427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr2 26705428 . C . PASS END=26705428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,841:0,47,255:20,0 chr2 26705429 . T . PASS END=26705442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:21:0,61,784:0,61,255:21,0 chr2 26705443 . C . PASS END=26705460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 26706330 . C . PASS END=26706330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 26706331 . T . PASS END=26706332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 26706333 . C . PASS END=26706361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,801:0,72,255:26,0 chr2 26706362 . G . PASS END=26706489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1096:0,86,255:37,0 chr2 26706490 . G . PASS END=26706490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 26706491 . G . PASS END=26706493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 26706494 . C . PASS END=26706516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:25,0 chr2 26706526 . C . PASS END=26706526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26707342 . C . PASS END=26707347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 26707348 . A . PASS END=26707348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26707349 . T . PASS END=26707349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 26707350 . G . PASS END=26707354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1133:0,90,255:31,0 chr2 26707355 . C . PASS END=26707355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 26707356 . T . PASS END=26707382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1117:0,80,255:36,0 chr2 26707383 . C . PASS END=26707383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:34,0 chr2 26707384 . G . PASS END=26707495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1178:0,83,255:40,0 chr2 26707496 . G . PASS END=26707496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:28,0 chr2 26707497 . G . PASS END=26707501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 26712075 . T . PASS END=26712075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 26712077 . A . PASS END=26712077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 26712079 . C . PASS END=26712079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 26712080 . T . PASS END=26712080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 26712081 . G . PASS END=26712126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr2 26712127 . G . PASS END=26712129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26712130 . T . PASS END=26712151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,953:0,62,255:26,0 chr2 26712152 . G . PASS END=26712152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 26712153 . G . PASS END=26712163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 26712546 . C . PASS END=26712548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 26712549 . A . PASS END=26712549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 26712550 . A . PASS END=26712608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,105,1327:0,106,255:40,0 chr2 26712614 . G . PASS END=26712614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 26717805 . C . PASS END=26717805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 26717809 . C . PASS END=26717941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:33:0,82,1141:0,82,255:40,0 chr2 26717943 . T . PASS END=26717943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:29,0 chr2 26724622 . C . PASS END=26724676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,170,255:40,0 chr2 26725158 . G A, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=1.487;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:4,7,0:9,6,0:48:85,0,50,457,465,922:255,0,255:14,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,3,8,5:5,8,6,7 chr2 26725168 . C . PASS END=26725169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 26725170 . C . PASS END=26725170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 26725171 . T . PASS END=26725175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1000:0,90,255:31,0 chr2 26725176 . G . PASS END=26725176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 26725177 . G . PASS END=26725195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:31:0,89,1113:0,89,255:40,0 chr2 26725196 . C . PASS END=26725294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:40:0,88,1520:0,88,255:40,0 chr2 26726640 . C . PASS END=26726708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1141:0,88,255:36,0 chr2 26726709 . C . PASS END=26726713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1035:0,99,255:26,0 chr2 26726722 . G . PASS END=26726722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 26739275 . C . PASS END=26739275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 26739286 . C . PASS END=26739294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 26739295 . C . PASS END=26739328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,792:0,63,255:25,0 chr2 26739329 . A . PASS END=26739329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 26739330 . G . PASS END=26739344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,939:0,62,255:26,0 chr2 26739345 . A . PASS END=26739346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26739347 . C . PASS END=26739349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 26739350 . T . PASS END=26739353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26739354 . T . PASS END=26739354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:26,0 chr2 26739355 . T . PASS END=26739360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:27,0 chr2 26739361 . T . PASS END=26739361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 26739362 . C . PASS END=26739369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr2 26739370 . T . PASS END=26739374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr2 26739375 . T . PASS END=26739375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,951:0,51,255:24,0 chr2 26739376 . T . PASS END=26739376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26739377 . G . PASS END=26739382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1031:0,84,255:28,0 chr2 26739383 . A . PASS END=26739383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,915:0,67,255:27,0 chr2 26739384 . C . PASS END=26739395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 26739396 . G . PASS END=26739396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26739397 . A . PASS END=26739405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26739406 . T . PASS END=26739406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 26739407 . C . PASS END=26739408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 26739409 . T . PASS END=26739424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr2 26739425 . T . PASS END=26739444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,690:0,44,255:19,0 chr2 26739445 . C . PASS END=26739445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 26739446 . G . PASS END=26739451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:18,0 chr2 26739452 . C . PASS END=26739467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:12:0,30,450:0,36,255:13,0 chr2 26739478 . G . PASS END=26739478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 26741868 . G . PASS END=26741868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 26741873 . C . PASS END=26741873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26741875 . C . PASS END=26741875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26741878 . C . PASS END=26741878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 26741879 . T . PASS END=26741884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 26741885 . A . PASS END=26741888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,999:0,81,255:29,0 chr2 26741889 . C . PASS END=26741889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 26741890 . A . PASS END=26741899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:31,0 chr2 26741900 . T . PASS END=26741900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 26741901 . C . PASS END=26741906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 26741907 . G . PASS END=26741907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 26741908 . C . PASS END=26741912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 26741913 . C . PASS END=26741914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 26741915 . G . PASS END=26741915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr2 26741916 . T . PASS END=26741916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr2 26741917 . C . PASS END=26741923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr2 26741924 . A . PASS END=26741931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 26741932 . C . PASS END=26741946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,908:0,72,255:26,0 chr2 26741947 . C . PASS END=26741960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,759:0,47,255:19,0 chr2 26741961 . G A, 73.98 PASS DP=22;MQ=250.00;MQRankSum=1.576;ReadPosRankSum=0.946;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,21,0:0.955,0.000:22:1,12,0:0,9,0:24:112,27,0,741,63,777:255,27,0:1,0:7.3978e+01,2.3978e+01,1.7413e-02,4.5000e+02,9.4530e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,3,18:0,1,8,13 chr2 26741962 . G . PASS END=26741977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,675:0,41,255:19,0 chr2 26750700 . T . PASS END=26750700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr2 26750701 . T . PASS END=26750705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:26,0 chr2 26750706 . C . PASS END=26750711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 26750712 . A . PASS END=26750712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,885:0,64,255:26,0 chr2 26750713 . C . PASS END=26750713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 26750714 . T . PASS END=26750715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,862:0,64,255:26,0 chr2 26750716 . T . PASS END=26750718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 26750719 . T . PASS END=26750719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26750720 . G . PASS END=26750734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr2 26750735 . A . PASS END=26750755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,923:0,64,255:26,0 chr2 26750756 . G . PASS END=26750760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 26750761 . T . PASS END=26750788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr2 26760584 . C . PASS END=26760642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1162:0,83,255:37,0 chr2 26781349 . C . PASS END=26781349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 26781361 . C . PASS END=26781439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:36:0,84,1260:0,95,255:40,0 chr2 26781482 . A . PASS END=26781482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 26781493 . C . PASS END=26781493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 26781503 . C . PASS END=26781503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 26781512 . C . PASS END=26781512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 26781528 . G . PASS END=26781528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 26781530 . C . PASS END=26781530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 26781534 . G . PASS END=26781534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 26781552 . C . PASS END=26781552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 26785481 . A . PASS END=26785549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1141:0,90,255:36,0 chr2 26785550 . C . PASS END=26785554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 26794984 . A . PASS END=26795019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,120,1800:0,129,255:40,0 chr2 26796910 . G . PASS END=26796918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:37,0 chr2 26796919 . G A, 163.91 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,23,0:0,16,0:114:202,117,0,1459,117,1459:255,117,0:0,0:1.6391e+02,1.1391e+02,0.0000e+00,4.5000e+02,1.4868e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,21:0,0,22,17 chr2 26796920 . T . PASS END=26796956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1322:0,97,255:38,0 chr2 26796957 . A . PASS END=26796969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:29,0 chr2 26796970 . G . PASS END=26796972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 26797571 . A . PASS END=26797659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:53:0,110,1800:0,110,255:40,0 chr2 26798717 . G . PASS END=26798852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:33:0,90,1236:0,94,255:40,0 chr2 26798853 . G . PASS END=26798853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1325:0,62,255:29,0 chr2 26798854 . C . PASS END=26798954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1149:0,80,255:40,0 chr2 26798955 . G . PASS END=26799012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,71,255:26,0 chr2 26799013 . T . PASS END=26799033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:18:0,51,765:0,54,255:17,0 chr2 26799034 . T . PASS END=26799034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 26799035 . T . PASS END=26799043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,590:0,51,255:18,0 chr2 26800384 . A . PASS END=26800384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26800385 . T . PASS END=26800386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 26800387 . G . PASS END=26800421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1070:0,80,255:35,0 chr2 26800422 . G A, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,16,0:0,19,0:102:190,105,0,1349,105,1349:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,14:0,0,24,11 chr2 26800423 . G . PASS END=26800446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1282:0,92,255:36,0 chr2 26800447 . T . PASS END=26800447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1038:0,71,255:31,0 chr2 26800448 . T . PASS END=26800459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:33,0 chr2 26800460 . T . PASS END=26800461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 26800462 . A . PASS END=26800462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr2 26800463 . G . PASS END=26800470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 26800471 . G . PASS END=26800496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,71,255:23,0 chr2 26801645 . G . PASS END=26801721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:37:0,85,1327:0,85,255:40,0 chr2 26802162 . G . PASS END=26802249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1285:0,90,255:40,0 chr2 26802250 . A . PASS END=26802250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1525:0,66,255:38,0 chr2 26802251 . G . PASS END=26802275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:38:0,87,1291:0,90,255:40,0 chr2 26802276 . G . PASS END=26802276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1325:0,75,255:29,0 chr2 26802277 . A . PASS END=26802278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,97,255:29,0 chr2 26802279 . A . PASS END=26802281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1127:0,75,255:28,0 chr2 26802282 . C . PASS END=26802292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1133:0,82,255:29,0 chr2 26802293 . A . PASS END=26802299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 26802300 . A . PASS END=26802300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1015:0,49,255:24,0 chr2 26802301 . G . PASS END=26802306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,886:0,64,255:24,0 chr2 26804231 . T . PASS END=26804246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,131,255:40,0 chr2 26804247 . T C, 48.22 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=4.374;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:13,8,0:15,13,0:47:83,0,50,751,993,1744:255,0,255:27,0:4.8218e+01,8.7237e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,9,14,7:12,16,9,12 chr2 26804248 . G . PASS END=26804261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,127,255:40,0 chr2 26805693 . T . PASS END=26805781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:48:0,86,1710:0,86,255:40,0 chr2 26806657 . G . PASS END=26806660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:36,0 chr2 26806661 . T . PASS END=26806661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1103:0,75,255:34,0 chr2 26806662 . T . PASS END=26806738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:36:0,92,1267:0,92,255:40,0 chr2 26806739 . T . PASS END=26806739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1629:0,64,255:40,0 chr2 26806740 . C . PASS END=26806750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:44:0,93,1477:0,93,255:40,0 chr2 26806751 . C . PASS END=26806751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:40,0 chr2 26806752 . C . PASS END=26806752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1568:0,93,255:40,0 chr2 26806753 . A . PASS END=26806753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1498:0,77,255:40,0 chr2 26806754 . T . PASS END=26806766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:42:0,87,1363:0,87,255:40,0 chr2 26818044 . C . PASS END=26818056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 26818057 . G . PASS END=26818059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 26818060 . A . PASS END=26818060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 26818061 . T . PASS END=26818061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 26818062 . A . PASS END=26818062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 26818063 . C . PASS END=26818070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:31,0 chr2 26818071 . T . PASS END=26818071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:29,0 chr2 26818072 . C . PASS END=26818168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1215:0,80,255:40,0 chr2 26818169 . T . PASS END=26818175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1005:0,79,255:26,0 chr2 26818176 . A . PASS END=26818176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,936:0,37,255:21,0 chr2 26818177 . A . PASS END=26818180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 26818181 . T . PASS END=26818181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr2 26818182 . T . PASS END=26818185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 26828370 . C . PASS END=26828420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1336:0,90,255:40,0 chr2 26835016 . T . PASS END=26835033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,892:0,62,255:26,0 chr2 26835034 . G . PASS END=26835043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr2 26835044 . C . PASS END=26835045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26835046 . G . PASS END=26835049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 26835050 . G . PASS END=26835054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 26835055 . G . PASS END=26835055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 26835056 . A . PASS END=26835063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 26835064 . G . PASS END=26835090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 26835091 . T . PASS END=26835091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 26835092 . G . PASS END=26835092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 26835093 . C . PASS END=26835093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,697:0,36,255:19,0 chr2 26835094 . A . PASS END=26835094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 26835095 . C . PASS END=26835095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr2 26835096 . T . PASS END=26835099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,695:0,63,255:21,0 chr2 26835100 . C . PASS END=26835100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 26835101 . T . PASS END=26835104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26835105 . G . PASS END=26835105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 26835106 . T . PASS END=26835106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 26835107 . A . PASS END=26835111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 26846282 . T . PASS END=26846472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:37:0,81,1272:0,81,255:40,0 chr2 26846473 . T . PASS END=26846473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:75:44:0,75,1125:0,132,255:25,0 chr2 26851356 . C . PASS END=26851393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:6,0 chr2 26851394 . T . PASS END=26851405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 26851406 . G . PASS END=26851422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr2 26851423 . A . PASS END=26851423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 26851424 . C . PASS END=26851426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 26851427 . G . PASS END=26851463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 26851464 . C T, 34.36 PASS DP=14;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=2.074;FractionInformativeReads=0.929;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,6,0:0.462,0.000:13:6,3,0:1,3,0:34:69,0,50,207,214,420:169,0,199:6,0:3.4357e+01,1.6145e-03,5.3002e+01,2.0655e+02,2.4830e+02,4.2308e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,6,0:5,2,3,3 chr2 26851465 . T . PASS END=26851467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26851468 . C . PASS END=26851479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 26851480 . C . PASS END=26851482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26851483 . G . PASS END=26851483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 26851484 . T . PASS END=26851484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 26851485 . T . PASS END=26851495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,462:0,45,255:15,0 chr2 26851496 . A . PASS END=26851496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr2 26851497 . G . PASS END=26851501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:15,0 chr2 26851502 . G . PASS END=26851511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,511:0,45,255:15,0 chr2 26851512 . A . PASS END=26851512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr2 26851513 . A . PASS END=26851524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr2 26851525 . C . PASS END=26851526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 26851527 . T . PASS END=26851527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 26851528 . C . PASS END=26851529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 26851530 . T . PASS END=26851530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 26851531 . T . PASS END=26851540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 26851541 . A . PASS END=26851550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:9,0 chr2 26852278 . C . PASS END=26852280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 26852281 . C . PASS END=26852281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 26852282 . A . PASS END=26852287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 26852288 . G . PASS END=26852288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 26852289 . G . PASS END=26852314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1266:0,90,255:36,0 chr2 26852315 . A . PASS END=26852315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 26852316 . G . PASS END=26852326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1266:0,91,255:36,0 chr2 26852327 . T . PASS END=26852327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1239:0,53,255:30,0 chr2 26852328 . T . PASS END=26852374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1180:0,83,255:32,0 chr2 26860508 . T . PASS END=26860527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,183,255:40,0 chr2 26863401 . C . PASS END=26863491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,117,1755:0,128,255:40,0 chr2 26864129 . C . PASS END=26864182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:39:0,88,1421:0,88,255:40,0 chr2 26914364 . C T, 49.80 PASS DP=42;MQ=249.81;MQRankSum=5.528;ReadPosRankSum=2.355;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:8,12,0:14,8,0:48:85,0,50,691,779,1470:255,0,255:21,0:4.9803e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,5,15:10,12,7,13 chr2 26915744 . A . PASS END=26915748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 26915749 . G . PASS END=26915756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 26915757 . A . LowGQ END=26915757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,84:5,0,88:3,0 chr2 26915758 . C . PASS END=26915841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr2 26915842 . C . PASS END=26915842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 26915843 . G . PASS END=26915852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr2 26915853 . A . PASS END=26915857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 26915858 . C . PASS END=26915885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 26915886 . T . LowGQ END=26915886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr2 26915887 . G . PASS END=26915890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr2 26915891 . G . PASS END=26915891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 26915892 . C . PASS END=26915893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 26915894 . C T, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:3,1,0:4,0,0:20:15,0,50,36,250,286:15,0,247:6,0:4.2532e-02,2.0113e+01,7.3113e+01,5.5881e+01,3.0522e+02,3.0922e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,1,0:4,3,1,0 chr2 26915895 . G . PASS END=26915897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 26915898 . A . PASS END=26915898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 26915899 . C . PASS END=26915911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 26915912 . G . PASS END=26915912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 26915913 . G . PASS END=26915919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 26915920 . C . PASS END=26915924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 26915925 . A . PASS END=26915930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr2 26915931 . A . PASS END=26915942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr2 26915943 . T . PASS END=26915992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr2 26915993 . T . LowGQ END=26915993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 26915994 . T . PASS END=26916019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr2 26916020 . A . LowGQ END=26916020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,114:15,0,129:4,0 chr2 26916021 . C . PASS END=26916021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 26916022 . C . LowGQ END=26916024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,122:0,0,137:5,0 chr2 26916025 . C . PASS END=26916025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr2 26916026 . G . PASS END=26916026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 26916032 . G . PASS END=26916032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 26950535 . G . PASS END=26950535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 26950536 . C . PASS END=26950537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26950538 . A . PASS END=26950540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 26950541 . G . PASS END=26950548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 26950549 . G . PASS END=26950549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr2 26950550 . C . PASS END=26950553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,861:0,69,255:26,0 chr2 26950554 . C . PASS END=26950554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 26950555 . A . PASS END=26950566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,970:0,78,255:26,0 chr2 26950567 . G . PASS END=26950581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 26950582 . A . PASS END=26950583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 26950584 . G . PASS END=26950618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1111:0,87,255:30,0 chr2 26950619 . T . PASS END=26950619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 26950620 . C . PASS END=26950621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 26950622 . T . PASS END=26950645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr2 26950646 . T . PASS END=26950653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,836:0,53,255:19,0 chr2 26950654 . T . PASS END=26950662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 26950663 . T . PASS END=26950687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 26950688 . G . PASS END=26950698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 26950699 . C . PASS END=26950699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 26950700 . G . PASS END=26950710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 26950711 . G . PASS END=26950712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr2 26950713 . G . PASS END=26950722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:10,0 chr2 26950723 . A . PASS END=26950723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 26950724 . A . PASS END=26950736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 26950737 . C . PASS END=26950737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 26950738 . G . PASS END=26950738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr2 26950739 . G . PASS END=26950741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 26950742 . T . PASS END=26950779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:9,0 chr2 26950780 . G . PASS END=26950792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:13,0 chr2 26950793 . A . PASS END=26950798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 26950799 . A . PASS END=26950801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26950802 . G . PASS END=26950802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 26950803 . G . PASS END=26950803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 26950804 . A . PASS END=26950838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,551:0,41,255:19,0 chr2 26950839 . C . PASS END=26950840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 26950841 . T . PASS END=26950841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 26950842 . C . PASS END=26950842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 26950843 . A . PASS END=26950870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr2 26950871 . C . PASS END=26950871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 26950872 . G . PASS END=26950872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 26950873 . C . PASS END=26950927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr2 26950928 . T . PASS END=26950928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:15,0 chr2 26950929 . C . PASS END=26950932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 26950933 . A . PASS END=26950933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:14,0 chr2 26950934 . T . PASS END=26950941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 26950942 . G . PASS END=26950950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 26950951 . G . PASS END=26950951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr2 26950952 . T . PASS END=26950958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 26950959 . C . PASS END=26950969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:11:0,21,315:0,33,255:9,0 chr2 26950970 . A . PASS END=26950970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 26950971 . C . PASS END=26950971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 26950972 . C . PASS END=26950975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr2 26950976 . T . PASS END=26950976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 26950977 . G . PASS END=26950978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 26950979 . T . PASS END=26950979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr2 26950980 . G . PASS END=26950985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 26950986 . C . PASS END=26950986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 26950987 . T . PASS END=26950987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 26950988 . T . PASS END=26950988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 26950989 . C . PASS END=26950994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr2 26950995 . C . PASS END=26950995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 26950996 . A . PASS END=26951001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 26951002 . G . PASS END=26951002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 26951003 . C . PASS END=26951011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 26951012 . A . PASS END=26951012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 26951013 . G . PASS END=26951018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:11,0 chr2 26951019 . C . PASS END=26951019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:10,0 chr2 26951020 . G . PASS END=26951022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr2 26951023 . G . PASS END=26951027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 26951028 . G . PASS END=26951028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 26951029 . C . PASS END=26951034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 26951035 . G . PASS END=26951035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 26951036 . C . PASS END=26951050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,550:0,45,255:15,0 chr2 26951051 . A . PASS END=26951051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 26951052 . C . PASS END=26951092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,576:0,45,255:19,0 chr2 26951093 . C . PASS END=26951093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 26951094 . T . PASS END=26951094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 26951095 . A . PASS END=26951102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:23,0 chr2 26951103 . C . PASS END=26951103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 26951104 . G . PASS END=26951116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 26951117 . C . PASS END=26951117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 26951118 . G . PASS END=26951125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 26951126 . G . PASS END=26951127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 26951128 . G . PASS END=26951157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,909:0,62,255:26,0 chr2 26951158 . G . PASS END=26951158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26951159 . T . PASS END=26951159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 26951160 . G . PASS END=26951162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 26951163 . G . PASS END=26951206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,953:0,69,255:25,0 chr2 26951207 . A . PASS END=26951207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 26951208 . G . PASS END=26951215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,793:0,72,255:25,0 chr2 26951216 . A . PASS END=26951216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr2 26951217 . G . PASS END=26951230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 26951231 . T . PASS END=26951231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:20,0 chr2 26951232 . G . PASS END=26951238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 26951239 . C . PASS END=26951240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:21,0 chr2 26951241 . G . PASS END=26951244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:23,0 chr2 26951245 . G . PASS END=26951248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,770:0,52,255:22,0 chr2 26951249 . T . PASS END=26951249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,562:0,5,255:16,0 chr2 26951250 . C . PASS END=26951250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 26951251 . T . PASS END=26951251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:17,0 chr2 26951252 . C . PASS END=26951256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:48:23:0,48,720:0,55,255:17,0 chr2 26951257 . T . PASS END=26951257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:17,0 chr2 26951258 . C . PASS END=26951258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 26951259 . C . PASS END=26951259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,659:0,16,255:16,0 chr2 26951260 . G . PASS END=26951262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:18,0 chr2 26951263 . A . PASS END=26951264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,631:0,21,255:17,0 chr2 26951265 . G . PASS END=26951265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 26951266 . T . PASS END=26951266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,515:0,23,255:16,0 chr2 26951267 . G . PASS END=26951278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 26951279 . G . PASS END=26951279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:29:21:0,29,509:0,29,255:14,0 chr2 26951280 . C . PASS END=26951280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 26951281 . C . PASS END=26951281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr2 26951282 . A . PASS END=26951282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,482:0,18,255:14,0 chr2 26951283 . C . PASS END=26951283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 26951284 . T . PASS END=26951284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 26951285 . C . PASS END=26951285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 26951286 . G . PASS END=26951289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr2 26951290 . C . PASS END=26951290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 26951291 . C . PASS END=26951291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,476:0,17,255:15,0 chr2 26951292 . G . PASS END=26951294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr2 26951295 . A . PASS END=26951300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr2 26951301 . C . PASS END=26951301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:12,0 chr2 26951302 . G . PASS END=26951306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 26951307 . C . PASS END=26951307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 26951308 . T . PASS END=26951308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:15,0 chr2 26951309 . A . PASS END=26951310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 26951311 . A . PASS END=26951311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:15,0 chr2 26951312 . G . PASS END=26951312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 26951313 . C . PASS END=26951313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 26951314 . G . PASS END=26951320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:18,0 chr2 26951321 . C . PASS END=26951321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 26951322 . C . PASS END=26951336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:17:0,43,593:0,43,255:18,0 chr2 26951337 . G . PASS END=26951337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26951338 . T . PASS END=26951338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 26951339 . G . PASS END=26951351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr2 26951352 . A . PASS END=26951352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 26951353 . C . PASS END=26951353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26951354 . G . PASS END=26951354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 26951355 . C . PASS END=26951372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:26,0 chr2 26951373 . G . PASS END=26951374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 26951375 . C . PASS END=26951379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 26951380 . G . PASS END=26951392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1148:0,83,255:29,0 chr2 26951393 . T . PASS END=26951410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,842:0,67,255:26,0 chr2 26951411 . T . PASS END=26951411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 26951412 . C . PASS END=26951416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 26951417 . A . PASS END=26951418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr2 26951419 . C . PASS END=26951436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:25,0 chr2 26987218 . A . PASS END=26987220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,662:0,44,255:19,0 chr2 26987221 . G . PASS END=26987223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 26987224 . T . PASS END=26987247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr2 26987248 . G . PASS END=26987265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 26987266 . A . PASS END=26987266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:21,0 chr2 26987267 . C . PASS END=26987276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 26987277 . C . PASS END=26987278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 26987279 . A . PASS END=26987284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 26987285 . T . PASS END=26987290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,698:0,46,255:19,0 chr2 26987291 . C . PASS END=26987294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 26997119 . A . PASS END=26997169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,860:0,62,255:26,0 chr2 26997170 . C . PASS END=26997170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:26,0 chr2 26997171 . T . PASS END=26997181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 26997182 . C . PASS END=26997191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 26997912 . G . PASS END=26997917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,607:0,48,255:18,0 chr2 26997918 . G . PASS END=26997923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr2 26997924 . T . PASS END=26997924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 26997925 . T . PASS END=26997939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,887:0,62,255:26,0 chr2 26997940 . C . PASS END=26997991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,994:0,81,255:35,0 chr2 26997992 . C . PASS END=26997992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr2 26997993 . T . PASS END=26998016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,105,1512:0,107,255:38,0 chr2 26998017 . T . PASS END=26998017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1333:0,62,255:34,0 chr2 26998018 . T . PASS END=26998052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1421:0,108,255:38,0 chr2 26998053 . G . PASS END=26998053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr2 26998054 . A . PASS END=26998060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1215:0,89,255:32,0 chr2 26998061 . A . PASS END=26998068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:29:0,71,1053:0,71,255:26,0 chr2 26998069 . G . PASS END=26998069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 26998070 . C . PASS END=26998083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:25,0 chr2 26998332 . C . PASS END=26998340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1119:0,93,255:34,0 chr2 26998341 . T . PASS END=26998341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr2 26998342 . G . PASS END=26998342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1341:0,105,255:35,0 chr2 26998343 . A . PASS END=26998343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr2 26998344 . C . PASS END=26998466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:33:0,85,1091:0,85,255:38,0 chr2 26998467 . C . PASS END=26998467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr2 26998468 . G . PASS END=26998512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1111:0,83,255:32,0 chr2 26998513 . C . PASS END=26998544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr2 26999240 . G . PASS END=26999350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,120,1800:0,122,255:40,0 chr2 27000910 . G . PASS END=27000921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,911:0,75,255:26,0 chr2 27000922 . T . PASS END=27000964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1023:0,81,255:31,0 chr2 27000965 . C . PASS END=27000965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:26,0 chr2 27000966 . G . PASS END=27000991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,978:0,67,255:26,0 chr2 27000992 . T . PASS END=27000992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27000993 . G . PASS END=27001008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,65,255:23,0 chr2 27001009 . C . PASS END=27001009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 27001010 . A . PASS END=27001029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 27001030 . T . PASS END=27001055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 27001056 . G . PASS END=27001133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:26,0 chr2 27001134 . A . PASS END=27001134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:22,0 chr2 27001135 . C . PASS END=27001142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 27001143 . G . PASS END=27001154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 27001155 . T . PASS END=27001155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 27001156 . T . PASS END=27001158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 27001159 . G . PASS END=27001159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 27001160 . C . PASS END=27001238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1164:0,83,255:34,0 chr2 27001239 . C . PASS END=27001240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 27001241 . C . PASS END=27001252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:30,0 chr2 27001253 . T . PASS END=27001253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 27001254 . G . PASS END=27001285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1105:0,82,255:32,0 chr2 27001286 . G . PASS END=27001286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 27001287 . G . PASS END=27001289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 27001290 . C . PASS END=27001290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr2 27001291 . G . PASS END=27001295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,961:0,90,255:30,0 chr2 27001296 . T . PASS END=27001296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:28,0 chr2 27001297 . C . PASS END=27001297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 27001298 . C . PASS END=27001298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27001299 . A . PASS END=27001299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,899:0,73,255:27,0 chr2 27001300 . G . PASS END=27001302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27001303 . G . PASS END=27001303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 27001304 . C . LowGQ END=27001304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,6:30:0:30:0,0,690:46,0,255:23,0 chr2 27001305 . C . PASS END=27001305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:27,0 chr2 27001306 . G . PASS END=27001308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27001309 . C . PASS END=27001309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 27001310 . C . PASS END=27001311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27001312 . T . PASS END=27001312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:13:32:0,13,837:0,13,255:25,0 chr2 27001313 . G . PASS END=27001315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1125:0,82,255:31,0 chr2 27001316 . A . PASS END=27001316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1023:0,49,255:27,0 chr2 27001317 . G . PASS END=27001324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1097:0,82,255:32,0 chr2 27001325 . C . PASS END=27001325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:43:33:0,43,989:0,43,255:26,0 chr2 27001326 . G . PASS END=27001328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1148:0,82,255:29,0 chr2 27001329 . C . PASS END=27001338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1000:0,60,255:26,0 chr2 27001339 . T . PASS END=27001339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:23,0 chr2 27001340 . G . PASS END=27001341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:27:0,70,986:0,70,255:24,0 chr2 27001342 . T . PASS END=27001342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr2 27001343 . G . PASS END=27001343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,860:0,61,255:23,0 chr2 27001344 . G . PASS END=27001345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 27001346 . T . PASS END=27001355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 27001356 . A . PASS END=27001356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr2 27001357 . C . PASS END=27001357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27001358 . T . PASS END=27001358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr2 27001359 . C . PASS END=27001359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27001360 . C . PASS END=27001360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 27001361 . C . PASS END=27001362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27001363 . T . PASS END=27001363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,735:0,14,255:21,0 chr2 27001364 . C . PASS END=27001365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27001366 . A . PASS END=27001366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 27001367 . T . PASS END=27001367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:20,0 chr2 27001368 . G . PASS END=27001371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 27001372 . C . PASS END=27001372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 27001373 . C . PASS END=27001379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr2 27009065 . A . PASS END=27009090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr2 27009091 . G . PASS END=27009150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 27009151 . G . PASS END=27009158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 27009159 . C . PASS END=27009159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 27009160 . C . PASS END=27009164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 27014999 . G . PASS END=27015087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:31:0,90,1249:0,90,255:40,0 chr2 27015088 . A . PASS END=27015088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr2 27015089 . A . PASS END=27015108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:34,0 chr2 27015370 . A . PASS END=27015370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 27015371 . T . PASS END=27015384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1103:0,93,255:32,0 chr2 27015385 . C . PASS END=27015385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 27015386 . T . PASS END=27015420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1150:0,83,255:33,0 chr2 27015624 . G . PASS END=27015701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,173,255:40,0 chr2 27016013 . G . PASS END=27016053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1196:0,96,255:39,0 chr2 27016054 . T . PASS END=27016054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1268:0,75,255:37,0 chr2 27016055 . C . PASS END=27016096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:35:0,90,1195:0,95,255:40,0 chr2 27016097 . G . PASS END=27016097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr2 27016098 . A . PASS END=27016098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 27016099 . T . PASS END=27016099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 27016100 . G . PASS END=27016106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 27016107 . T . PASS END=27016120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,922:0,62,255:25,0 chr2 27016121 . C . PASS END=27016125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 27016126 . C . PASS END=27016126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:20,0 chr2 27016127 . C . PASS END=27016133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 27016134 . A . PASS END=27016147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr2 27121368 . A . PASS END=27121372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 27121373 . T . PASS END=27121378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 27121379 . C . PASS END=27121379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 27121380 . T . PASS END=27121380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr2 27121381 . C . PASS END=27121382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 27121383 . G . PASS END=27121383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 27121384 . C . PASS END=27121385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:12,0 chr2 27121386 . A . PASS END=27121386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 27121387 . G . PASS END=27121387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr2 27121388 . C . PASS END=27121393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27121394 . G . PASS END=27121394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 27121395 . A . PASS END=27121399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:12,0 chr2 27121400 . C . PASS END=27121400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 27121401 . A . PASS END=27121401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27121402 . T . PASS END=27121402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 27121403 . C . PASS END=27121407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 27121408 . G . PASS END=27121408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 27121409 . A . PASS END=27121410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 27121411 . G . PASS END=27121411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 27121412 . C . PASS END=27121425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr2 27121426 . A . PASS END=27121426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 27121427 . T . PASS END=27121432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 27121433 . C . PASS END=27121433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 27121434 . A . PASS END=27121447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 27121448 . C . PASS END=27121454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27121455 . A . PASS END=27121455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 27121456 . T . PASS END=27121475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr2 27121476 . C . PASS END=27121476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 27121477 . A . PASS END=27121477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 27121478 . G . PASS END=27121480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 27121481 . G . PASS END=27121483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27121484 . C . PASS END=27121484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:12,0 chr2 27121485 . C . PASS END=27121486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27121487 . C . PASS END=27121487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 27121488 . G . PASS END=27121490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 27121491 . C . PASS END=27121496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27121497 . A . PASS END=27121498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 27121499 . C . PASS END=27121499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 27121500 . C . PASS END=27121504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27121505 . C . PASS END=27121505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 27121506 . G . PASS END=27121508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 27121509 . G . PASS END=27121509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 27121510 . C . PASS END=27121513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27121514 . G . PASS END=27121516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27121517 . G . PASS END=27121517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 27121518 . A . PASS END=27121524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 27121525 . C . PASS END=27121535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27121536 . C . PASS END=27121543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 27121544 . C . PASS END=27121544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 27121545 . C . PASS END=27121545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27121546 . C . PASS END=27121568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 27121569 . C . PASS END=27121569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 27121570 . A . PASS END=27121576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 27121577 . C . PASS END=27121577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 27121578 . C . PASS END=27121584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:15,0 chr2 27121585 . T . PASS END=27121588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 27121589 . G . PASS END=27121589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr2 27121590 . A . PASS END=27121596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 27121597 . C . PASS END=27121597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:12,0 chr2 27121598 . G . PASS END=27121600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 27121601 . C . PASS END=27121601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 27121602 . G . PASS END=27121603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 27121604 . G . PASS END=27121604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 27121605 . G . PASS END=27121611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 27121612 . T . PASS END=27121612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 27121613 . C . PASS END=27121615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27121616 . C . PASS END=27121616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 27121617 . C . PASS END=27121619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 27121620 . G . PASS END=27121621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:9,0 chr2 27121622 . G . PASS END=27121623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 27121624 . C . PASS END=27121628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:9,0 chr2 27147755 . G . PASS END=27147757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 27147758 . G . PASS END=27147758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 27147759 . C . PASS END=27147759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 27147760 . A . PASS END=27147760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 27147761 . C . PASS END=27147762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 27147763 . C . PASS END=27147894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1055:0,84,255:40,0 chr2 27147895 . C . PASS END=27147897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27147898 . C . PASS END=27147901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 27147902 . T . PASS END=27147903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27147904 . G . PASS END=27147909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27147910 . C . PASS END=27147913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 27150121 . G . PASS END=27150285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,87,255:40,0 chr2 27150286 . G . PASS END=27150293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 27150294 . G . PASS END=27150295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27150296 . C . PASS END=27150300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27151123 . G . PASS END=27151191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:32:0,96,1233:0,96,255:40,0 chr2 27154508 . C . PASS END=27154552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:41:0,81,1322:0,81,255:40,0 chr2 27156126 . A . PASS END=27156201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,131,255:40,0 chr2 27157446 . G . PASS END=27157602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:38:0,107,1413:0,107,255:40,0 chr2 27162899 . T . PASS END=27163006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,144,255:40,0 chr2 27163007 . G . PASS END=27163039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,90,255:40,0 chr2 27163040 . G . PASS END=27163040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 27164818 . G . PASS END=27164826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,808:0,80,255:27,0 chr2 27164827 . A . PASS END=27164838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr2 27164839 . A . PASS END=27164839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,709:0,44,255:23,0 chr2 27164840 . A . PASS END=27164842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27164843 . G . PASS END=27164843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27164844 . T . PASS END=27164847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 27164848 . G . PASS END=27164850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27164851 . G . PASS END=27164851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27164852 . C . PASS END=27164852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:27,0 chr2 27164853 . C . PASS END=27164960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,875:0,80,255:40,0 chr2 27165411 . G . PASS END=27165423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:25,0 chr2 27165424 . A . PASS END=27165424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 27165425 . G . PASS END=27165425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 27165426 . C . PASS END=27165426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 27165427 . A . PASS END=27165431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr2 27165432 . G . PASS END=27165436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr2 27165437 . A . PASS END=27165437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr2 27165438 . G . PASS END=27165445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 27165446 . A . PASS END=27165446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,877:0,54,255:26,0 chr2 27165447 . C . PASS END=27165468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:32,0 chr2 27165469 . C . PASS END=27165469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr2 27165470 . G . PASS END=27165498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:32,0 chr2 27165499 . A . PASS END=27165499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 27165500 . G . PASS END=27165511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 27165512 . T . PASS END=27165513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27165514 . G . PASS END=27165586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1140:0,83,255:35,0 chr2 27165587 . C . PASS END=27165602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:24:0,66,990:0,72,255:24,0 chr2 27165603 . G . PASS END=27165603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 27165604 . G . PASS END=27165609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 27165610 . A . PASS END=27165610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr2 27165611 . G . PASS END=27165615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 27165616 . A . PASS END=27165616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 27165617 . A . PASS END=27165618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27167524 . A . PASS END=27167526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,832:0,72,255:25,0 chr2 27167527 . T . PASS END=27167527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 27167528 . T . PASS END=27167543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,869:0,62,255:26,0 chr2 27167544 . G . PASS END=27167651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:83:29:0,83,1141:0,83,255:40,0 chr2 27167652 . G . PASS END=27167652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:28,0 chr2 27167653 . G . PASS END=27167660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr2 27167661 . G . PASS END=27167661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27167662 . G . PASS END=27167665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 27167666 . T . PASS END=27167667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1069:0,71,255:26,0 chr2 27167668 . C . PASS END=27167670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27167671 . G . PASS END=27167692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 27169778 . G . PASS END=27169784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr2 27169785 . G . PASS END=27169804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:30,0 chr2 27169805 . A . PASS END=27169830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1111:0,90,255:31,0 chr2 27169831 . C . PASS END=27169832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 27169833 . T . PASS END=27169837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 27169838 . G . PASS END=27169839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:28,0 chr2 27169840 . G . PASS END=27169840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 27169841 . G . PASS END=27169841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 27169842 . C A, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=3.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:6,10,0:8,7,0:47:85,0,46,185,185,185:255,0,255:13,0:5.0000e+01,9.3967e-05,4.9350e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,7,7,10:9,5,10,7 chr2 27169843 . A . PASS END=27169843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 27169844 . G . PASS END=27169863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr2 27245087 . A . PASS END=27245196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:37:0,90,1350:0,104,255:40,0 chr2 27245197 . G . PASS END=27245197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:30,0 chr2 27245198 . C . PASS END=27245204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr2 27245205 . C . PASS END=27245207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr2 27246200 . G . PASS END=27246201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 27246202 . G . PASS END=27246202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1467:0,74,255:40,0 chr2 27246203 . C . PASS END=27246247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:43:0,85,1566:0,85,255:40,0 chr2 27246248 . A . PASS END=27246284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,158,255:40,0 chr2 27246285 . C T, 218.55 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,30,0:0,27,0:169:256,172,0,2201,172,2201:255,171,0:0,0:2.1855e+02,1.6855e+02,0.0000e+00,4.5000e+02,2.0332e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,32:0,0,32,25 chr2 27246286 . G . PASS END=27246322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,120,1800:0,135,255:40,0 chr2 27246323 . T . PASS END=27246345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1260:0,98,255:40,0 chr2 27246964 . A . PASS END=27247157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:83:31:0,83,1075:0,83,255:40,0 chr2 27247158 . C . PASS END=27247165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:25,0 chr2 27248451 . T . PASS END=27248464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr2 27248465 . T . PASS END=27248465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:23,0 chr2 27248466 . C . PASS END=27248471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:25,0 chr2 27248472 . C . PASS END=27248472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 27248473 . A . PASS END=27248480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 27248481 . A . PASS END=27248481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:24,0 chr2 27248482 . A . PASS END=27248483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 27248484 . A . PASS END=27248484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 27248485 . C . PASS END=27248486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 27248487 . T . PASS END=27248489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:24,0 chr2 27248490 . A . PASS END=27248495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,931:0,75,255:26,0 chr2 27248496 . C . PASS END=27248515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1147:0,80,255:31,0 chr2 27248516 . G . PASS END=27248517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1135:0,63,255:30,1 chr2 27248518 . C . PASS END=27248525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:33:0,84,1189:0,88,255:32,0 chr2 27248526 . G . PASS END=27248528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:70:36:0,70,1199:0,70,255:33,0 chr2 27248529 . T . PASS END=27248530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:33,0 chr2 27248531 . C . PASS END=27248531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1185:0,55,255:31,0 chr2 27248532 . T . PASS END=27248534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1180:0,85,255:32,0 chr2 27248535 . G . PASS END=27248535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:32,0 chr2 27248536 . G . PASS END=27248537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:32,0 chr2 27248538 . A . PASS END=27248538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:53:34:0,53,1136:0,53,255:30,0 chr2 27248539 . G . PASS END=27248539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:32,0 chr2 27248540 . A . PASS END=27248540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:31,0 chr2 27248541 . A . PASS END=27248541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1239:0,86,255:31,0 chr2 27248542 . T . PASS END=27248543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:32,0 chr2 27248544 . C . PASS END=27248549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1209:0,86,255:32,0 chr2 27248550 . C . PASS END=27248550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:30,0 chr2 27248551 . A . PASS END=27248551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1125:0,55,255:30,0 chr2 27248552 . G . PASS END=27248556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1180:0,83,255:31,0 chr2 27248557 . A . PASS END=27248559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1068:0,60,255:30,0 chr2 27248560 . T . PASS END=27248562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 27248563 . C . PASS END=27248563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr2 27248564 . G . PASS END=27248567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:31,0 chr2 27248568 . A . PASS END=27248568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:29,0 chr2 27248569 . T . PASS END=27248575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 27248576 . G . PASS END=27248576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 27248577 . A . PASS END=27248583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 27248584 . A . PASS END=27248584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,976:0,57,255:28,0 chr2 27248585 . A . PASS END=27248586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1020:0,90,255:30,0 chr2 27248587 . T . PASS END=27248588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:28,0 chr2 27248589 . T . PASS END=27248597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 27248598 . A . PASS END=27248599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27248600 . C . PASS END=27248605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,976:0,82,255:28,0 chr2 27248748 . C . PASS END=27248748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27248749 . T . PASS END=27248749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr2 27248750 . G . PASS END=27248753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1133:0,87,255:30,0 chr2 27248754 . G . PASS END=27248755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1069:0,71,255:30,0 chr2 27248756 . C . PASS END=27248759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1131:0,80,255:30,0 chr2 27248760 . A . PASS END=27248760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:28,0 chr2 27248761 . A . PASS END=27248762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:31,0 chr2 27248763 . C . PASS END=27248763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:30,0 chr2 27248764 . T . PASS END=27248783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:34:0,93,1395:0,96,255:40,0 chr2 27248784 . A . PASS END=27248784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:71:47:0,71,1463:0,71,255:40,0 chr2 27248785 . A . PASS END=27248897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1215:0,94,255:40,0 chr2 27248898 . G . PASS END=27248900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 27249148 . G . PASS END=27249207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,832:0,61,255:25,0 chr2 27249208 . G . PASS END=27249208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 27249209 . A . PASS END=27249216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 27255884 . A . LowGQ END=27255884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,227:15,0,241:9,0 chr2 27255885 . T . PASS END=27255893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,337:0,33,255:13,0 chr2 27255894 . A . PASS END=27255894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,394:0,22,255:11,0 chr2 27255895 . G . PASS END=27255895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27255896 . A . LowGQ END=27255897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,341:0,0,255:12,0 chr2 27255898 . G . PASS END=27255899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27255900 . C . LowGQ END=27255900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,286:22,0,255:10,0 chr2 27255901 . G . PASS END=27255901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27255902 . G . PASS END=27255902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255903 . G . PASS END=27255903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255904 . C . LowGQ END=27255904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,316:30,0,255:11,0 chr2 27255905 . G . PASS END=27255905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 27255906 . T . PASS END=27255906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 27255907 . G . PASS END=27255910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 27255911 . C . PASS END=27255911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,413:0,28,255:14,0 chr2 27255912 . G . PASS END=27255913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr2 27255914 . T . PASS END=27255915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr2 27255916 . G . PASS END=27255916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 27255917 . G . PASS END=27255918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:13,0 chr2 27255919 . G . PASS END=27255919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255920 . G . PASS END=27255920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,404:0,12,255:12,0 chr2 27255921 . T . PASS END=27255921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255922 . A . PASS END=27255923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:12:15:0,12,374:0,12,255:13,0 chr2 27255924 . T . PASS END=27255924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255925 . G . PASS END=27255925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 27255926 . A . PASS END=27255926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255927 . A . PASS END=27255927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:13,0 chr2 27255928 . G . PASS END=27255928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255929 . A . PASS END=27255929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,346:0,25,255:13,0 chr2 27255930 . A . PASS END=27255930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:8:14:0,8,313:0,8,255:12,0 chr2 27255931 . G . PASS END=27255933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 27255934 . T . LowGQ END=27255934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,233:47,0,255:10,0 chr2 27255935 . C . PASS END=27255935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:11,0 chr2 27255936 . G . PASS END=27255937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 27255938 . C . LowGQ END=27255938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,343:14,0,255:8,0 chr2 27255939 . G . PASS END=27255940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 27255941 . C . PASS END=27255942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,332:0,25,255:9,0 chr2 27255943 . T . PASS END=27255943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,364:0,9,255:8,0 chr2 27255944 . G . PASS END=27255947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 27255948 . T . PASS END=27255949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:13:10:0,13,258:0,13,255:9,0 chr2 27255950 . G . PASS END=27255952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr2 27255953 . G . PASS END=27255955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,235:0,13,235:9,0 chr2 27255956 . G . LowGQ END=27255956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,241:39,0,255:8,0 chr2 27255957 . G . PASS END=27255959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,283:0,30,255:10,0 chr2 27255960 . C . PASS END=27255960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 27255961 . C . PASS END=27255961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 27255962 . G . PASS END=27255962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 27255963 . G . PASS END=27255975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr2 27255976 . C . PASS END=27255976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 27255977 . G . PASS END=27255977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 27255978 . G . PASS END=27255979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr2 27255980 . A . PASS END=27255981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 27255982 . G . PASS END=27255982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,1 chr2 27255983 . A . PASS END=27255983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr2 27255984 . A . PASS END=27255984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 27255985 . C . PASS END=27255988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255989 . A . PASS END=27255989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 27255990 . G . PASS END=27255991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27255992 . G . PASS END=27255993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:10:15:0,10,488:0,10,255:13,1 chr2 27255994 . G . PASS END=27255994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 27255995 . C . PASS END=27255995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 27255996 . T . PASS END=27255998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27255999 . G . PASS END=27256000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27256001 . G . PASS END=27256001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr2 27256002 . A . PASS END=27256002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 27256003 . A . PASS END=27256009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 27256010 . G . LowGQ END=27256010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:11,0 chr2 27256011 . G . PASS END=27256018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 27256019 . A . PASS END=27256019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 27256020 . A . PASS END=27256022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 27256023 . A . PASS END=27256023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,319:0,19,255:11,0 chr2 27256024 . C . PASS END=27256029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 27256030 . G . PASS END=27256034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 27256935 . C . PASS END=27256936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 27256937 . G . PASS END=27256944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27256945 . G . PASS END=27256955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,892:0,66,255:24,0 chr2 27256956 . C . PASS END=27257093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:27:0,80,1024:0,80,255:39,0 chr2 27257094 . A . PASS END=27257094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1162:0,69,255:26,0 chr2 27257095 . G . PASS END=27257096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 27257097 . A . PASS END=27257107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1048:0,74,255:27,0 chr2 27257108 . C . PASS END=27257115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 27257116 . G . PASS END=27257116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 27257117 . G . PASS END=27257123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 27257124 . C . PASS END=27257124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr2 27257125 . A . PASS END=27257128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27257129 . A . PASS END=27257129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 27257130 . A . PASS END=27257130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:25,0 chr2 27257131 . A . PASS END=27257134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 27258003 . C . PASS END=27258005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 27258006 . G . PASS END=27258006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 27258007 . A . PASS END=27258020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:27,0 chr2 27258021 . C . PASS END=27258040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:28:0,80,1017:0,80,255:33,0 chr2 27258041 . C . PASS END=27258041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr2 27258042 . C . PASS END=27258147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1025:0,81,255:39,0 chr2 27258148 . C . PASS END=27258153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 27258462 . A . PASS END=27258558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:33:0,98,1099:0,98,255:40,0 chr2 27258559 . T . PASS END=27258559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1356:0,68,255:34,0 chr2 27258560 . C . PASS END=27258596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1121:0,85,255:33,0 chr2 27258838 . G . PASS END=27258920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,101,1549:0,101,255:40,0 chr2 27259355 . T . PASS END=27259460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1125:0,80,255:40,0 chr2 27259573 . T . PASS END=27259654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:37:0,87,1280:0,87,255:40,0 chr2 27259945 . G . PASS END=27260046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,105,1575:0,123,255:40,0 chr2 27260429 . C . PASS END=27260431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 27260432 . G . PASS END=27260435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 27260436 . G . PASS END=27260436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 27260437 . A . PASS END=27260468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,996:0,84,255:35,0 chr2 27260469 . G A, 48.94 PASS DP=35;MQ=250.00;MQRankSum=4.983;ReadPosRankSum=2.950;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,15,0:0.429,0.000:35:10,11,0:10,4,0:46:84,0,47,184,184,184:255,0,255:19,0:4.8945e+01,9.8886e-05,5.0000e+01,1.8371e+02,2.1848e+02,1.8673e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,7,9,6:13,7,11,4 chr2 27260470 . T . PASS END=27260506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1248:0,92,255:37,0 chr2 27260507 . T . PASS END=27260555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,86,255:36,0 chr2 27260556 . G . PASS END=27260556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 27260557 . A . PASS END=27260561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27260562 . A . PASS END=27260570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:29:0,62,1008:0,62,255:26,0 chr2 27260658 . A . PASS END=27260669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:37:0,89,1333:0,89,255:38,0 chr2 27260683 . C . PASS END=27260752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1210:0,83,255:34,0 chr2 27260753 . A . PASS END=27260759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,80,255:26,0 chr2 27260760 . G . PASS END=27260760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27260900 . G . PASS END=27260914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr2 27260915 . T . PASS END=27260915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 27260916 . G . PASS END=27260926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 27260927 . C . PASS END=27260927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 27260928 . T . PASS END=27260964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,651:0,51,255:19,0 chr2 27260965 . C . PASS END=27260969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 27260970 . A . PASS END=27260972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27260973 . C . PASS END=27260976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27260977 . T . PASS END=27260982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr2 27260983 . C . PASS END=27260983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27260984 . A . PASS END=27260984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 27260985 . G . PASS END=27260996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr2 27260997 . T . PASS END=27260997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 27260998 . C . PASS END=27261022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,856:0,69,255:24,0 chr2 27261023 . A . PASS END=27261023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 27261024 . G . PASS END=27261083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 27261084 . C . PASS END=27261105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 27261352 . C . PASS END=27261363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 27261364 . G . PASS END=27261364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 27261365 . C . PASS END=27261366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27261367 . C . PASS END=27261369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 27261370 . G . PASS END=27261370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 27261371 . C . PASS END=27261390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 27261391 . T . PASS END=27261391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 27261392 . C . PASS END=27261395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 27261396 . A . PASS END=27261396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr2 27261397 . G . PASS END=27261400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 27261570 . G . PASS END=27261582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1020:0,80,255:30,0 chr2 27261583 . T . PASS END=27261583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 27261584 . G . PASS END=27261671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1260:0,87,255:40,0 chr2 27261672 . A . PASS END=27261672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1455:0,71,255:33,0 chr2 27261673 . T . PASS END=27261683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,101,255:36,0 chr2 27261915 . G . PASS END=27261993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1113:0,83,255:39,0 chr2 27261994 . T . PASS END=27261994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:26,0 chr2 27261995 . C . PASS END=27261995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27261996 . C . PASS END=27262008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr2 27262009 . T . PASS END=27262009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:22,0 chr2 27262010 . C . PASS END=27262023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 27262024 . C . PASS END=27262031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:17,0 chr2 27262032 . G . PASS END=27262032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:13,0 chr2 27262609 . C . PASS END=27262705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1305:0,84,255:40,0 chr2 27262898 . C . PASS END=27262899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 27262900 . G . PASS END=27262901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27262902 . C . PASS END=27262902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr2 27262903 . T . PASS END=27262918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr2 27262919 . G . PASS END=27263066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:28:0,84,1023:0,84,255:40,0 chr2 27263213 . C . PASS END=27263321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1259:0,97,255:40,0 chr2 27263322 . A . PASS END=27263360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr2 27263361 . G . PASS END=27263364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr2 27263579 . A . PASS END=27263676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:31:0,83,1194:0,83,255:40,0 chr2 27263677 . G . PASS END=27263677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 27263678 . G . PASS END=27263684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27263685 . G . PASS END=27263685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 27263686 . C . PASS END=27263686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27263687 . C . PASS END=27263687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 27263688 . C . PASS END=27263703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr2 27263704 . A . PASS END=27263705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 27275827 . A . PASS END=27275829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:19,0 chr2 27275830 . G . PASS END=27275832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:23,0 chr2 27275833 . C . PASS END=27275833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 27275834 . T . PASS END=27275842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,929:0,62,255:26,0 chr2 27275843 . G . PASS END=27275844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 27275845 . G . PASS END=27275845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 27275846 . G . PASS END=27275853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 27275854 . T . PASS END=27275854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 27275855 . T . PASS END=27275858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr2 27275859 . T . PASS END=27275860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,911:0,67,255:28,0 chr2 27275861 . C . PASS END=27275863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 27275864 . G . PASS END=27275864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 27275865 . C . PASS END=27275873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr2 27275874 . A . PASS END=27275874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 27275875 . G . PASS END=27275887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1247:0,86,255:32,0 chr2 27275888 . A . PASS END=27275889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1091:0,66,255:32,0 chr2 27275890 . G . PASS END=27275919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1160:0,92,255:35,0 chr2 27275920 . G . PASS END=27275920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:34,0 chr2 27275921 . G . PASS END=27275999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,89,255:40,0 chr2 27276000 . C . PASS END=27276025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:26,0 chr2 27276026 . T . PASS END=27276026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 27276027 . T . PASS END=27276034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr2 27276035 . G . PASS END=27276035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr2 27276036 . G . PASS END=27276036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 27276037 . A . PASS END=27276041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:48:25:0,48,720:0,59,255:18,0 chr2 27276270 . G . PASS END=27276431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,86,255:40,0 chr2 27276432 . C . PASS END=27276441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 27276764 . A . PASS END=27276927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:93:33:0,93,1395:0,96,255:40,0 chr2 27277498 . C . PASS END=27277503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,615:0,51,255:19,0 chr2 27277504 . G . PASS END=27277527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,746:0,63,255:24,0 chr2 27277528 . G . PASS END=27277528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 27277529 . C . PASS END=27277550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,870:0,62,255:26,0 chr2 27277551 . G . PASS END=27277553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 27277554 . T . PASS END=27277554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,865:0,67,255:27,0 chr2 27277555 . T . PASS END=27277568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1019:0,84,255:29,0 chr2 27277569 . T . PASS END=27277571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1070:0,62,255:26,0 chr2 27277572 . C . PASS END=27277572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27277573 . G . PASS END=27277573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 27277574 . A . PASS END=27277577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 27277578 . C . PASS END=27277581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 27277582 . C . PASS END=27277582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27277583 . T . PASS END=27277583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 27277584 . G . PASS END=27277584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27277585 . C . PASS END=27277586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 27277587 . A . PASS END=27277587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27277588 . T . PASS END=27277590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 27277591 . G . PASS END=27277601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 27277602 . A . PASS END=27277602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr2 27277603 . T . PASS END=27277607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27277608 . A . PASS END=27277608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr2 27277609 . G . PASS END=27277610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 27277611 . C . PASS END=27277613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:24,0 chr2 27277614 . G . PASS END=27277630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1180:0,83,255:30,0 chr2 27277631 . C . PASS END=27277631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 27277632 . C . PASS END=27277633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 27277634 . G . PASS END=27277641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:22,0 chr2 27277642 . C . PASS END=27277662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:19,0 chr2 27277663 . C . PASS END=27277663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 27277664 . G . PASS END=27277675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:18,0 chr2 27277943 . A . PASS END=27277961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:26,0 chr2 27277962 . G . PASS END=27278080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1141:0,81,255:40,0 chr2 27278081 . C . PASS END=27278100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr2 27278101 . T . PASS END=27278113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr2 27278114 . C . PASS END=27278114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr2 27278115 . A . PASS END=27278121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:18,0 chr2 27278547 . C . PASS END=27278547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 27278550 . C . PASS END=27278550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr2 27278551 . A . PASS END=27278650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,90,255:40,0 chr2 27278651 . A . PASS END=27278651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:28,0 chr2 27278652 . T . PASS END=27278656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,91,255:28,0 chr2 27278657 . A . PASS END=27278657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 27278658 . C . PASS END=27278658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 27278659 . T . PASS END=27278665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 27278666 . T . PASS END=27278667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 27278668 . A . PASS END=27278675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27278676 . G . PASS END=27278679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr2 27278680 . T . PASS END=27278680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27278681 . C . PASS END=27278688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27278689 . C . PASS END=27278694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:27:0,66,990:0,71,255:26,0 chr2 27278695 . C . PASS END=27278705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1141:0,90,255:30,0 chr2 27278706 . T . PASS END=27278706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr2 27278707 . C . PASS END=27278750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:34,0 chr2 27278751 . T . PASS END=27278751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr2 27278752 . C . PASS END=27278752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr2 27278753 . T . PASS END=27278753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 27278754 . C . PASS END=27278757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1127:0,93,255:31,0 chr2 27278758 . A . PASS END=27278758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:28,0 chr2 27278759 . A . PASS END=27278779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1180:0,85,255:32,0 chr2 27278780 . C . PASS END=27278781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 27278782 . G . PASS END=27278833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:35,0 chr2 27278834 . A . PASS END=27278834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:33,0 chr2 27278835 . G . PASS END=27279006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:34:0,88,1271:0,88,255:40,0 chr2 27279491 . G . PASS END=27279501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,911:0,75,255:26,0 chr2 27279502 . G . PASS END=27279505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 27279506 . T . PASS END=27279506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 27279507 . A . PASS END=27279519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1132:0,83,255:35,0 chr2 27279520 . C . PASS END=27279520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:34,0 chr2 27279521 . T . PASS END=27279572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1135:0,82,255:36,0 chr2 27279573 . A . PASS END=27279573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1176:0,63,255:31,0 chr2 27279574 . T . PASS END=27279594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:35:0,90,1197:0,91,255:34,0 chr2 27279595 . A . PASS END=27279595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:31,0 chr2 27279596 . G . PASS END=27279596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 27279597 . A . PASS END=27279597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,960:0,55,255:29,0 chr2 27279598 . T . PASS END=27279606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,100,255:32,0 chr2 27279607 . T . PASS END=27279607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1210:0,50,255:30,0 chr2 27279608 . A . PASS END=27279614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1485:0,105,255:34,0 chr2 27279615 . G . PASS END=27279615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1056:0,69,255:32,0 chr2 27279616 . A . PASS END=27279632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1181:0,86,255:34,0 chr2 27279633 . T . PASS END=27279633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:29,0 chr2 27279634 . C . PASS END=27279645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1153:0,80,255:30,0 chr2 27279646 . A . PASS END=27279660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,71,255:25,0 chr2 27280171 . C . PASS END=27280172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 27280173 . A . PASS END=27280181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:22,0 chr2 27280182 . A . PASS END=27280182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 27280183 . A . PASS END=27280201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,791:0,66,255:26,0 chr2 27280202 . C . PASS END=27280204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 27280205 . T . PASS END=27280207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1000:0,68,255:26,0 chr2 27280208 . G . PASS END=27280210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 27280211 . A . PASS END=27280212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:28,0 chr2 27280213 . C . PASS END=27280253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1057:0,87,255:31,0 chr2 27280254 . C . PASS END=27280254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 27280255 . C . PASS END=27280257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 27280258 . T . PASS END=27280258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 27280259 . C . PASS END=27280267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr2 27280268 . G . PASS END=27280270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27280271 . T . PASS END=27280276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27280277 . T . PASS END=27280287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:25,0 chr2 27280288 . T . PASS END=27280288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:25,0 chr2 27280289 . G . PASS END=27280293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 27280294 . A . PASS END=27280294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 27280295 . C . PASS END=27280303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 27280304 . C . PASS END=27280306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,831:0,58,255:19,0 chr2 27280308 . T . PASS END=27280308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:17,0 chr2 27281268 . G . PASS END=27281470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:33:0,87,1327:0,87,255:40,0 chr2 27282058 . T . PASS END=27282061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr2 27282062 . T . PASS END=27282062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 27282063 . T . PASS END=27282064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr2 27282065 . C . PASS END=27282076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,760:0,60,255:22,0 chr2 27282077 . T . PASS END=27282077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 27282078 . C . PASS END=27282088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 27282089 . T . PASS END=27282089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 27282090 . T . PASS END=27282098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 27282099 . C . PASS END=27282099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 27282100 . A . PASS END=27282101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 27282102 . G . PASS END=27282102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 27282103 . A . PASS END=27282107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 27282108 . T . PASS END=27282108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 27282109 . T . PASS END=27282114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 27282115 . C . PASS END=27282119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 27282120 . C . PASS END=27282190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,889:0,65,255:26,0 chr2 27282191 . C . PASS END=27282199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 27282200 . C . PASS END=27282213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 27282214 . G . PASS END=27282245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1172:0,84,255:31,0 chr2 27282246 . C . PASS END=27282248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27282249 . A . PASS END=27282262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:29,0 chr2 27282263 . C . PASS END=27282264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27282265 . C . PASS END=27282265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27282266 . G . PASS END=27282278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr2 27282279 . C . PASS END=27282279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr2 27282280 . A . PASS END=27282293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr2 27282294 . T . PASS END=27282294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 27282295 . G . PASS END=27282302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 27282303 . T . PASS END=27282303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:20,0 chr2 27282304 . G . PASS END=27282306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27282307 . C . PASS END=27282332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 27282333 . A . PASS END=27282333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:14,0 chr2 27282334 . G . PASS END=27282337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 27290362 . A . PASS END=27290487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:35:0,89,1286:0,89,255:40,0 chr2 27290488 . T . PASS END=27290524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,108,1620:0,121,255:40,0 chr2 27290525 . A G, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.528;ReadPosRankSum=2.405;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,22,0:0.524,0.000:42:8,10,0:12,12,0:48:85,0,50,779,707,1486:255,0,255:18,0:5.0000e+01,6.6269e-05,5.2804e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,14,8:8,12,10,12 chr2 27290526 . C . PASS END=27290562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1404:0,101,255:40,0 chr2 27290563 . G . PASS END=27290612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1186:0,83,255:33,0 chr2 27290613 . C . PASS END=27290633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1014:0,68,255:26,0 chr2 27290634 . T . PASS END=27290634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 27290635 . A . PASS END=27290636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27291500 . G . PASS END=27291531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1157:0,93,255:36,0 chr2 27291532 . A . PASS END=27291532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr2 27291533 . A . PASS END=27291573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1200:0,95,255:37,0 chr2 27291574 . A . PASS END=27291574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:32,0 chr2 27291575 . C . PASS END=27291604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:33,0 chr2 27291605 . G . PASS END=27291612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:24,0 chr2 27291916 . A . PASS END=27291962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1164:0,89,255:35,0 chr2 27292441 . G . PASS END=27292455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,884:0,61,255:26,0 chr2 27292456 . G . PASS END=27292456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 27292457 . G . PASS END=27292463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27292464 . C . PASS END=27292520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1141:0,80,255:32,0 chr2 27292521 . C . PASS END=27292564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 27292565 . C . PASS END=27292566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27292567 . A . PASS END=27292574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 27292960 . G . PASS END=27292962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 27292963 . G . PASS END=27292975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,612:0,48,255:19,0 chr2 27292976 . C . PASS END=27292982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 27292983 . G . PASS END=27292983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27292984 . G . PASS END=27293015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,856:0,69,255:25,0 chr2 27293016 . C . PASS END=27293112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1054:0,84,255:38,0 chr2 27293113 . T . PASS END=27293131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1172:0,93,255:31,0 chr2 27294217 . T . PASS END=27294330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:37:0,87,1305:0,97,255:40,0 chr2 27301934 . A . PASS END=27301948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,504:0,42,255:19,0 chr2 27301949 . C . PASS END=27301998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,831:0,62,255:26,0 chr2 27301999 . C . PASS END=27302020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 27302021 . A . PASS END=27302026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,986:0,67,255:26,0 chr2 27302027 . T . PASS END=27302027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:24,0 chr2 27302028 . A . PASS END=27302048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:25,0 chr2 27302049 . T . PASS END=27302095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 27302096 . C . PASS END=27302096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 27302097 . G . PASS END=27302103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,604:0,48,255:16,0 chr2 27303019 . G . PASS END=27303138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,81,255:40,0 chr2 27303600 . G . PASS END=27303618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:18,0 chr2 27303619 . C . PASS END=27303619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:18,0 chr2 27303620 . C . PASS END=27303622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr2 27303623 . G . PASS END=27303625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,706:0,57,255:19,0 chr2 27303626 . A . PASS END=27303658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,809:0,66,255:24,0 chr2 27303659 . A . PASS END=27303659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 27303660 . G . PASS END=27303686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:25,0 chr2 27303687 . C . PASS END=27303687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 27303688 . G . PASS END=27303710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,886:0,72,255:24,0 chr2 27303711 . T . PASS END=27303711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:20,0 chr2 27303712 . C . PASS END=27303717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 27303718 . C . PASS END=27303723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27303724 . C . PASS END=27303724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 27303725 . C . PASS END=27303725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27303726 . T . PASS END=27303726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 27303727 . G . PASS END=27303733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27303734 . C . PASS END=27303738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27303739 . C . PASS END=27303740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27303741 . A . PASS END=27303741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 27303742 . C . PASS END=27303743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27303744 . G . PASS END=27303754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr2 27303755 . A G, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,13,0:0,8,0:60:148,63,0,814,63,814:255,69,0:0,0:1.1020e+02,6.0204e+01,4.1418e-06,4.5000e+02,9.4974e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,9:0,0,10,11 chr2 27303756 . G . PASS END=27303756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr2 27303757 . C . PASS END=27303757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 27303758 . C . PASS END=27303758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 27303759 . T . PASS END=27303768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr2 27303769 . A . PASS END=27303769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27303770 . A . PASS END=27303770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 27303771 . C . PASS END=27303775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27303776 . C . PASS END=27303776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 27303777 . T . PASS END=27303777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27303778 . G . PASS END=27303783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 27303784 . A . PASS END=27303784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:17,0 chr2 27303785 . G . PASS END=27303786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:17,0 chr2 27303787 . G . PASS END=27303789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,729:0,47,255:18,0 chr2 27303790 . G . PASS END=27303790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:16,0 chr2 27303791 . G . PASS END=27303792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:18,0 chr2 27303793 . A . PASS END=27303793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 27303794 . G . PASS END=27303794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 27303795 . C . PASS END=27303803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:18,0 chr2 27303804 . T . PASS END=27303804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr2 27303805 . G . PASS END=27303805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 27303806 . G . PASS END=27303806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr2 27303807 . A . PASS END=27303808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:17,0 chr2 27303809 . T . PASS END=27303809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 27303810 . G . PASS END=27303820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:17,0 chr2 27304951 . G . PASS END=27304964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,429:0,39,255:13,0 chr2 27304965 . G . PASS END=27305008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,488:0,42,255:17,0 chr2 27305009 . G . PASS END=27305009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 27305010 . G . PASS END=27305035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 27305036 . G . PASS END=27305042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27305043 . C . PASS END=27305044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27305045 . G . PASS END=27305054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 27305055 . C . PASS END=27305068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,690:0,44,255:19,0 chr2 27305069 . G . PASS END=27305069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 27305070 . C . PASS END=27305070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 27305071 . A . PASS END=27305071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 27305072 . G . PASS END=27305073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr2 27305074 . G . PASS END=27305074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 27305075 . G . PASS END=27305075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 27305076 . G . PASS END=27305083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 27305084 . G . PASS END=27305094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,814:0,53,255:20,0 chr2 27305095 . A . PASS END=27305128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:23,0 chr2 27305129 . C . PASS END=27305129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr2 27305130 . C . PASS END=27305135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 27305136 . G . PASS END=27305146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,775:0,50,255:19,0 chr2 27305147 . C . PASS END=27305151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27305152 . A . PASS END=27305156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 27305157 . A . PASS END=27305159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27305160 . C . PASS END=27305160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 27305161 . A . PASS END=27305175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:22,0 chr2 27305176 . T . PASS END=27305176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr2 27305177 . C . PASS END=27305184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 27305185 . C . PASS END=27305189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 27305190 . G . PASS END=27305195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27305196 . A . PASS END=27305205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 27305206 . A . PASS END=27305216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 27305217 . C . PASS END=27305241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 27305242 . G . PASS END=27305242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27305243 . C . PASS END=27305246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27305247 . A . PASS END=27305249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1008:0,71,255:26,0 chr2 27305250 . A . PASS END=27305251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27305252 . T . PASS END=27305254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 27305255 . G . PASS END=27305259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27305260 . G . PASS END=27305260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr2 27305261 . C . PASS END=27305261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27305262 . A . PASS END=27305272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:26,0 chr2 27305273 . C . PASS END=27305275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:22:0,54,810:0,66,255:18,0 chr2 27305276 . A . PASS END=27305276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr2 27305277 . G . PASS END=27305277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27305278 . C . PASS END=27305278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr2 27305279 . C . PASS END=27305295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 27305296 . C . PASS END=27305303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:16:0,39,585:0,48,255:13,0 chr2 27305304 . G . PASS END=27305312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr2 27305313 . C . PASS END=27305324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,495:0,32,255:13,0 chr2 27305325 . C . PASS END=27305336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27305337 . G . PASS END=27305341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 27305342 . C . PASS END=27305343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27305344 . G . PASS END=27305344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 27305345 . C . PASS END=27305368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 27305369 . T . PASS END=27305371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27305372 . C . PASS END=27305427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,601:0,45,255:19,0 chr2 27305428 . T . PASS END=27305428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 27305429 . G . PASS END=27305475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr2 27305476 . G . PASS END=27305478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27305479 . G . PASS END=27305507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,635:0,40,255:19,0 chr2 27305508 . G . PASS END=27305511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27305512 . T . PASS END=27305512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27305513 . G . PASS END=27305519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27305520 . C . PASS END=27305522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27305523 . C . PASS END=27305569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,862:0,63,255:24,0 chr2 27305570 . A . PASS END=27305570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 27305571 . G . PASS END=27305578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27305579 . T . PASS END=27305593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:19,0 chr2 27305594 . A . PASS END=27305629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 27305630 . C . PASS END=27305633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 27305634 . G . PASS END=27305642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,495:0,31,255:13,0 chr2 27305643 . A . PASS END=27305646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr2 27305647 . T . PASS END=27305660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 27305661 . T . PASS END=27305661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:12,0 chr2 27305662 . C . PASS END=27305664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr2 27305665 . G . PASS END=27305665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 27305666 . C . PASS END=27305668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 27305669 . G . PASS END=27305669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 27305670 . G . PASS END=27305672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 27305673 . G . PASS END=27305673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr2 27305674 . A . PASS END=27305674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 27305675 . C . PASS END=27305677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,360:0,20,255:8,0 chr2 27305678 . C . PASS END=27305678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 27305679 . T . PASS END=27305679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr2 27305680 . T . PASS END=27305692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,372:0,30,255:11,0 chr2 27305693 . G . PASS END=27305693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 27305694 . G . PASS END=27305696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 27305697 . C . PASS END=27305697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 27305698 . C . PASS END=27305703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,427:0,39,255:13,0 chr2 27305704 . A . PASS END=27305705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 27305706 . G . PASS END=27305709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 27305710 . A . PASS END=27305710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 27305711 . G . PASS END=27305711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 27305712 . G . PASS END=27305713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,418:0,22,255:11,0 chr2 27305714 . G . PASS END=27305716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 27305717 . G . PASS END=27305717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 27305718 . A . PASS END=27305718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,302:0,3,255:9,0 chr2 27305719 . G . PASS END=27305719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 27305720 . C . PASS END=27305729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,299:0,30,255:11,0 chr2 27305730 . G . PASS END=27305730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 27305731 . C . PASS END=27305731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr2 27305732 . T . PASS END=27305734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 27305735 . T . PASS END=27305735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 27305736 . G . PASS END=27305742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr2 27305743 . T . PASS END=27305744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 27305745 . A . PASS END=27305748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,441:0,36,255:12,0 chr2 27305749 . A . PASS END=27305749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,324:0,3,255:10,0 chr2 27305750 . C . PASS END=27305750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 27305751 . T . PASS END=27305751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,333:0,6,255:11,0 chr2 27305752 . G . PASS END=27305752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 27305753 . G . PASS END=27305753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 27305754 . C . LowGQ END=27305755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,360:0,0,255:12,0 chr2 27305756 . G . PASS END=27305758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr2 27305759 . T . LowGQ END=27305759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,296:17,0,255:10,0 chr2 27305760 . G . PASS END=27305765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27305766 . C . PASS END=27305766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 27305767 . G . PASS END=27305767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27305768 . G . PASS END=27305768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,390:0,8,255:11,0 chr2 27305769 . G . PASS END=27305769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27305770 . G . PASS END=27305770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 27305771 . C . PASS END=27305771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27305772 . C . PASS END=27305772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 27305773 . G . PASS END=27305777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:13,0 chr2 27305778 . G . PASS END=27305778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27305779 . A . LowGQ END=27305779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,264:52,0,255:11,0 chr2 27305780 . G . PASS END=27305780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 27305781 . C . LowGQ END=27305781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,332:30,0,255:10,0 chr2 27305782 . A . PASS END=27305782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr2 27305783 . G . PASS END=27305783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27305784 . T . LowGQ END=27305784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,335:14,0,255:11,0 chr2 27305785 . T . PASS END=27305785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,382:0,25,255:13,0 chr2 27305786 . G . PASS END=27305788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 27305789 . G . PASS END=27305789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:13,0 chr2 27305790 . G . PASS END=27305792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 27305793 . C . PASS END=27305793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27305794 . T . PASS END=27305795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:14:0,6,380:0,6,255:13,0 chr2 27305796 . C . PASS END=27305796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:13,0 chr2 27305797 . T . PASS END=27305798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:12:15:0,12,433:0,12,255:13,0 chr2 27305799 . G . PASS END=27305799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 27305800 . C . PASS END=27305800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 27305801 . C . PASS END=27305802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 27305803 . A . LowGQ END=27305804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,338:18,0,255:13,0 chr2 27305805 . G . PASS END=27305805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,449:0,15,255:13,0 chr2 27305806 . T . LowGQ END=27305806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,339:18,0,255:11,0 chr2 27305807 . G . PASS END=27305807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 27305808 . A . PASS END=27305808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,411:0,15,255:13,0 chr2 27305809 . G . PASS END=27305809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 27305810 . C . PASS END=27305810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:12,0 chr2 27305811 . G . LowGQ END=27305811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,427:7,0,255:11,0 chr2 27305812 . G . PASS END=27305812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:12,0 chr2 27305813 . G . PASS END=27305813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:12,0 chr2 27305814 . G . PASS END=27305814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 27305815 . A . LowGQ END=27305816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,496:1,0,255:13,0 chr2 27305817 . C . PASS END=27305817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 27305818 . T . LowGQ END=27305818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,385:37,0,255:11,0 chr2 27305819 . G . PASS END=27305820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:12:17:0,12,488:0,12,255:14,0 chr2 27305821 . G . PASS END=27305821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 27305822 . G . PASS END=27305822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,484:0,12,255:14,0 chr2 27305823 . G . PASS END=27305823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,482:0,9,255:15,0 chr2 27305824 . G . PASS END=27305830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,548:0,40,255:19,0 chr2 27305831 . G . PASS END=27305831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:17,0 chr2 27305832 . G . PASS END=27305833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 27305834 . T . PASS END=27305834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr2 27305835 . C . PASS END=27305856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr2 27305857 . G . PASS END=27305857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 27305858 . G . PASS END=27305907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,584:0,48,255:19,0 chr2 27305908 . A . PASS END=27305908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 27305909 . C . PASS END=27305960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,620:0,48,255:19,0 chr2 27305961 . G . PASS END=27305962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27305963 . G . PASS END=27305963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27305964 . G . PASS END=27305966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27305967 . C . PASS END=27305967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 27305968 . A . PASS END=27306007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:25,0 chr2 27306008 . A . PASS END=27306008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 27306009 . G . PASS END=27306020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,963:0,78,255:26,0 chr2 27306021 . C . PASS END=27306023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27306024 . C . PASS END=27306030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 27306031 . C . PASS END=27306033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27306034 . T . PASS END=27306034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 27306035 . G . PASS END=27306035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27306036 . G . PASS END=27306066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,921:0,62,255:26,0 chr2 27306067 . A . PASS END=27306067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,898:0,26,255:20,0 chr2 27306068 . G . PASS END=27306082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 27306083 . C . PASS END=27306130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,670:0,41,255:19,0 chr2 27306131 . G . PASS END=27306152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 27306153 . G . PASS END=27306153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 27306154 . G . PASS END=27306159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,825:0,66,255:23,0 chr2 27306160 . T . PASS END=27306160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 27306161 . G . PASS END=27306172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:24,0 chr2 27306173 . G . PASS END=27306173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 27306174 . G . PASS END=27306197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr2 27306198 . G . PASS END=27306209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 27306210 . G . PASS END=27306218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 27306219 . C . PASS END=27306219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 27306220 . G . PASS END=27306229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 27306230 . T . PASS END=27306238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,767:0,50,255:19,0 chr2 27306239 . G . PASS END=27306240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 27306241 . G . PASS END=27306303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,588:0,48,255:19,0 chr2 27306304 . G . PASS END=27306314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 27306315 . C . PASS END=27306321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr2 27306322 . G . PASS END=27306322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr2 27306323 . C . PASS END=27306328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 27306329 . C . PASS END=27306329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 27306330 . G . PASS END=27306355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,607:0,44,255:19,0 chr2 27306356 . C . PASS END=27306359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27306360 . C . PASS END=27306363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 27306364 . C . PASS END=27306364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27306365 . C . PASS END=27306375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,753:0,49,255:18,0 chr2 27306376 . A . PASS END=27306376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr2 27306377 . G . PASS END=27306378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 27306379 . T . PASS END=27306379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:16,0 chr2 27306380 . C . PASS END=27306386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr2 27306387 . G . PASS END=27306391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 27306392 . T . PASS END=27306392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr2 27306393 . C . PASS END=27306395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27306396 . A . PASS END=27306396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:19,0 chr2 27306397 . G . PASS END=27306402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 27306403 . G . PASS END=27306403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27306404 . C . PASS END=27306404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27306405 . T . PASS END=27306407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:18,0 chr2 27306408 . C . PASS END=27306423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:22,0 chr2 27306424 . A . PASS END=27306424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 27306425 . T . PASS END=27306454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,906:0,69,255:26,0 chr2 27306455 . C . PASS END=27306455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,820:0,28,255:22,0 chr2 27306456 . G . PASS END=27306502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,832:0,61,255:25,0 chr2 27306503 . G . PASS END=27306503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 27306504 . A . PASS END=27306509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,852:0,69,255:23,0 chr2 27306510 . A . PASS END=27306510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr2 27306511 . G . PASS END=27306530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,819:0,61,255:25,0 chr2 27306531 . G . PASS END=27306534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:25:0,48,765:0,48,255:18,0 chr2 27306535 . A . PASS END=27306540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:20,0 chr2 27306541 . C . PASS END=27306553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:18,0 chr2 27306554 . G . PASS END=27306554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:13,0 chr2 27306555 . C . PASS END=27306555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 27306556 . G . PASS END=27306556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 27306557 . C . PASS END=27306563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 27306564 . G . PASS END=27306564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 27306565 . G . PASS END=27306587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,637:0,40,255:19,0 chr2 27306588 . G . PASS END=27306588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 27306589 . C . PASS END=27306628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,590:0,41,255:18,0 chr2 27306629 . T . PASS END=27306629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 27306630 . G . PASS END=27306638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 27306639 . T . PASS END=27306639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 27306640 . G . PASS END=27306642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27306643 . A . PASS END=27306643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr2 27306644 . A . PASS END=27306644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 27306645 . C . PASS END=27306645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:10,0 chr2 27306646 . G . PASS END=27306646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:11,0 chr2 27306647 . G . PASS END=27306668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,480:0,39,255:13,0 chr2 27306669 . C . PASS END=27306671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 27306672 . C . PASS END=27306709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,443:0,36,255:13,0 chr2 27306710 . G . PASS END=27306712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 27306713 . C . PASS END=27306713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 27306714 . T . PASS END=27306723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 27306724 . T . PASS END=27306724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 27306725 . C . PASS END=27306730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr2 27306731 . A . PASS END=27306731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 27306732 . A . PASS END=27306749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:18,0 chr2 27306750 . A . PASS END=27306750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 27306751 . T . PASS END=27306774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,560:0,51,255:18,0 chr2 27306775 . T . PASS END=27306775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 27306776 . G . PASS END=27306800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,652:0,41,255:19,0 chr2 27306801 . A . PASS END=27306801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr2 27306802 . G . PASS END=27306831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 27306832 . A . PASS END=27306832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:15,0 chr2 27306833 . G . PASS END=27306842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:17,0 chr2 27306843 . G . PASS END=27306843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr2 27306844 . A . PASS END=27306845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 27306846 . C . PASS END=27306846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 27306847 . G . PASS END=27306854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 27306855 . C . PASS END=27306859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 27306860 . C . PASS END=27306860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:11,0 chr2 27306861 . A . PASS END=27306870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 27306871 . A . PASS END=27306871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 27306872 . C . PASS END=27306875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:12,0 chr2 27306876 . A . PASS END=27306876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 27306877 . C . PASS END=27306879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr2 27306880 . G . LowGQ END=27306880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr2 27306881 . T . PASS END=27306884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 27306885 . G . PASS END=27306885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr2 27306886 . G . PASS END=27306892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 27306893 . A . PASS END=27306893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 27306894 . G . PASS END=27306894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 27307283 . G . PASS END=27307292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,111,1665:0,114,255:40,0 chr2 27307293 . A . PASS END=27307399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:38:0,93,1373:0,98,255:40,0 chr2 27307859 . G . PASS END=27307876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,162,255:40,0 chr2 27308028 . G . PASS END=27308053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1249:0,99,255:35,0 chr2 27308054 . G . PASS END=27308054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr2 27308055 . T . PASS END=27308107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:35:0,86,1074:0,86,255:37,0 chr2 27308108 . A . PASS END=27308108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:33,0 chr2 27308109 . C . PASS END=27308140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:33,0 chr2 27308141 . G . PASS END=27308161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr2 27308162 . A . PASS END=27308163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 27308164 . A . PASS END=27308165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27308546 . G . PASS END=27308550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,795:0,66,255:23,0 chr2 27308551 . T . PASS END=27308551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr2 27308552 . T . PASS END=27308555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 27308556 . A . PASS END=27308556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 27308557 . G . PASS END=27308564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,902:0,75,255:25,0 chr2 27308565 . G . PASS END=27308565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 27308566 . G . PASS END=27308575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,907:0,75,255:25,0 chr2 27308576 . A . PASS END=27308577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 27308578 . T . PASS END=27308581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 27308582 . T . PASS END=27308582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 27308583 . G . PASS END=27308589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr2 27308590 . G . PASS END=27308593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27308594 . T . PASS END=27308594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 27308595 . G . PASS END=27308599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 27308600 . G . PASS END=27308650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr2 27308651 . T . PASS END=27308651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27308652 . G . PASS END=27308653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27308654 . C . PASS END=27308654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 27308655 . C . PASS END=27308660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 27308661 . A . PASS END=27308661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27308662 . G . PASS END=27308662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27308663 . A . PASS END=27308663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 27308664 . C . PASS END=27308665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27308666 . C . PASS END=27308674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,810:0,53,255:19,0 chr2 27308675 . A . PASS END=27308675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:17,0 chr2 27308676 . C . PASS END=27308695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,630:0,40,255:17,0 chr2 27308696 . A . PASS END=27308696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 27308697 . T . PASS END=27308697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27308698 . A . PASS END=27308703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 27308704 . G . PASS END=27308757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,501:0,44,255:19,0 chr2 27308758 . C . PASS END=27308775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr2 27308776 . A . PASS END=27308776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:17,0 chr2 27308777 . C . PASS END=27308777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:18,0 chr2 27308778 . G . PASS END=27308802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr2 27308803 . C . PASS END=27308803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 27308804 . A . PASS END=27308809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:24,0 chr2 27308810 . C . PASS END=27308810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr2 27308811 . G . PASS END=27308811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 27308812 . C . PASS END=27308823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:24,0 chr2 27308824 . C . PASS END=27308824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 27308825 . C . PASS END=27308847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,61,255:22,0 chr2 27308848 . C . PASS END=27308862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:19,0 chr2 27308863 . C . PASS END=27308863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 27308864 . C . PASS END=27308872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 27308873 . A . PASS END=27308883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr2 27309749 . T . PASS END=27309749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 27309988 . G . PASS END=27309988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 27310031 . G . PASS END=27310031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27310113 . T . PASS END=27310113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 27310128 . A . PASS END=27310165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1288:0,90,255:36,0 chr2 27310166 . G . PASS END=27310166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr2 27310167 . C . PASS END=27310208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1260:0,90,255:38,0 chr2 27310209 . T . PASS END=27310209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr2 27310210 . C . PASS END=27310214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27310215 . A . PASS END=27310219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr2 27315200 . G . PASS END=27315208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27315209 . C . PASS END=27315214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr2 27315215 . A . PASS END=27315227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1011:0,87,255:31,0 chr2 27315228 . G . PASS END=27315228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 27315229 . G . PASS END=27315251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:31:0,86,1119:0,86,255:33,0 chr2 27315252 . G A, 50.00 PASS DP=35;MQ=249.12;MQRankSum=4.472;ReadPosRankSum=3.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,18,0:0.514,0.000:35:10,8,0:7,10,0:48:85,0,50,644,579,1223:255,0,255:15,0:5.0000e+01,6.5751e-05,5.2910e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,7,11:10,7,13,5 chr2 27315253 . T . PASS END=27315255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,88,255:32,0 chr2 27315256 . T . PASS END=27315256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1089:0,72,255:27,0 chr2 27315257 . C . PASS END=27315289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,89,255:31,0 chr2 27315290 . C . PASS END=27315296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 27315297 . G . PASS END=27315297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 27315298 . C . PASS END=27315298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr2 27315299 . T . PASS END=27315299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27315300 . C . PASS END=27315316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,74,255:27,0 chr2 27317334 . C . PASS END=27317334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 27317342 . C . PASS END=27317465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:39:0,81,1215:0,101,255:40,0 chr2 27317466 . C . PASS END=27317467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr2 27317468 . A . PASS END=27317474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,90,255:27,0 chr2 27317475 . G . PASS END=27317479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,955:0,67,255:24,0 chr2 27317668 . C . PASS END=27317778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:32:0,81,1162:0,86,255:40,0 chr2 27317779 . C . PASS END=27317790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,65,255:26,0 chr2 27317791 . G . PASS END=27317802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,720:0,44,255:19,0 chr2 27319597 . G . PASS END=27319669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,114,1629:0,119,255:40,0 chr2 27320371 . G . PASS END=27320626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:32:0,80,1141:0,80,255:40,0 chr2 27320627 . T . PASS END=27320627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1657:0,75,255:40,0 chr2 27320628 . G . PASS END=27320708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1575:0,109,255:40,0 chr2 27320709 . T . PASS END=27320709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:38,0 chr2 27320710 . G . PASS END=27320741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1388:0,98,255:38,0 chr2 27320742 . G . PASS END=27320742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:34,0 chr2 27320743 . G . PASS END=27320919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1215:0,80,255:40,1 chr2 27320920 . C . PASS END=27320920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr2 27320921 . T . PASS END=27320923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 27320924 . T . PASS END=27320931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,76,255:26,0 chr2 27322064 . G . PASS END=27322079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,103,1376:0,103,255:40,0 chr2 27322080 . A . PASS END=27322080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1270:0,57,255:37,0 chr2 27322081 . T . PASS END=27322152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,107,1474:0,107,255:40,0 chr2 27322157 . G . PASS END=27322157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1278:0,67,255:34,0 chr2 27322288 . G . PASS END=27322288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 27322289 . G . PASS END=27322293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 27322294 . G . PASS END=27322313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,746:0,63,255:24,0 chr2 27322314 . A . PASS END=27322314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 27322315 . G . PASS END=27322360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,870:0,65,255:26,0 chr2 27322361 . G . PASS END=27322367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 27322368 . T . PASS END=27322369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27322370 . C . PASS END=27322373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 27322374 . C . PASS END=27322397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:26,0 chr2 27322398 . G . PASS END=27322399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 27322400 . G . PASS END=27322405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27322406 . G . PASS END=27322409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 27322410 . C . PASS END=27322420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 27322421 . T . PASS END=27322421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 27322422 . C . PASS END=27322422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 27322423 . C . PASS END=27322423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 27322424 . G . PASS END=27322424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 27322425 . T . PASS END=27322441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 27322442 . C . PASS END=27322442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27322443 . A . PASS END=27322444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 27322445 . G . PASS END=27322445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 27322533 . G . PASS END=27322618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1127:0,82,255:39,0 chr2 27322652 . C . PASS END=27322675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1164:0,80,255:33,0 chr2 27322676 . C . PASS END=27322676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 27322677 . T . PASS END=27322678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27322679 . C . PASS END=27322679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 27322680 . C . PASS END=27322688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27322689 . A . PASS END=27322689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 27322690 . G . PASS END=27322693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 27322694 . G . PASS END=27322708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:25,0 chr2 27322777 . G . PASS END=27322777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:17,0 chr2 27322794 . G . PASS END=27322794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 27322816 . A . PASS END=27322816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 27322818 . A . PASS END=27322818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 27322832 . G . PASS END=27322832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 27322877 . T . PASS END=27322877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 27322944 . G . PASS END=27322944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 27323087 . G . PASS END=27323087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 27323214 . C . PASS END=27323214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 27323284 . C . PASS END=27323347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,105,1443:0,107,255:40,0 chr2 27323348 . G . PASS END=27323384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,127,255:40,0 chr2 27323385 . C T, 49.98 PASS DP=54;MQ=249.56;MQRankSum=6.236;ReadPosRankSum=3.621;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,26,0:0.491,0.000:53:13,11,0:14,15,0:48:85,0,50,930,936,1866:255,0,255:27,0:4.9982e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,17,20,6:16,11,11,15 chr2 27323386 . A . PASS END=27323410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,138,255:40,0 chr2 27323514 . T . PASS END=27323514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 27323572 . C . PASS END=27323572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 27324142 . C . PASS END=27324142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27324143 . T . PASS END=27324146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,885:0,64,255:26,0 chr2 27324147 . T . PASS END=27324254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1017:0,84,255:40,0 chr2 27324255 . C . PASS END=27324287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1263:0,89,255:36,0 chr2 27324288 . C . PASS END=27324288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,1 chr2 27324289 . G . PASS END=27324290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:40:35:0,40,1184:0,40,255:30,1 chr2 27324291 . G . PASS END=27324293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:30,0 chr2 27324294 . C . PASS END=27324295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,85,255:28,0 chr2 27324296 . T . PASS END=27324297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:25,0 chr2 27324298 . T . PASS END=27324298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:24,0 chr2 27324299 . C . LowGQ END=27324299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:0:34:0,0,1078:14,0,255:23,0 chr2 27324300 . C . PASS END=27324300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 27324301 . T . LowGQ END=27324304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:0:33:0,0,939:45,0,255:23,0 chr2 27324305 . G . PASS END=27324305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr2 27324306 . C . PASS END=27324307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:26,0 chr2 27324308 . T . PASS END=27324308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,978:0,35,255:25,0 chr2 27324309 . C . PASS END=27324322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:28:0,74,1092:0,74,255:26,0 chr2 27324323 . G . PASS END=27324325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27324326 . T . PASS END=27324326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27324327 . C . PASS END=27324332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 27324333 . T . PASS END=27324333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr2 27324334 . G . PASS END=27324336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 27324337 . C . PASS END=27324339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 27324340 . G . LowGQ END=27324340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:11,19:30:0:30:0,0,0:255,0,255:11,0 chr2 27324341 . G . PASS END=27324346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:26,0 chr2 27324347 . T . PASS END=27324347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr2 27324348 . C . PASS END=27324353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:21,0 chr2 27324354 . C . LowGQ END=27324354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,14:29:0:29:0,0,47:255,0,255:15,0 chr2 27324355 . A . PASS END=27324358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:22,0 chr2 27324359 . T . PASS END=27324359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 27324360 . C . PASS END=27324365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 27324366 . G . PASS END=27324366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 27324367 . G . PASS END=27324370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr2 27324371 . C . LowGQ END=27324371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,6:27:0:27:0,0,535:151,0,255:21,0 chr2 27324372 . C . PASS END=27324376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:22,0 chr2 27324377 . T . PASS END=27324377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:20,0 chr2 27324378 . C . PASS END=27324381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 27324382 . T . PASS END=27324382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr2 27324383 . C . PASS END=27324392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr2 27324393 . G . PASS END=27324393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 27324394 . G . PASS END=27324408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,807:0,62,255:26,0 chr2 27324409 . C . PASS END=27324430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1008:0,78,255:26,0 chr2 27324431 . C . PASS END=27324432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27324433 . T . PASS END=27324443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1053:0,71,255:26,0 chr2 27324444 . G . PASS END=27324445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27324446 . A . PASS END=27324446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 27324447 . C . PASS END=27324450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1169:0,80,255:29,0 chr2 27324451 . T . PASS END=27324451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 27324452 . C . PASS END=27324470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1185:0,80,255:31,0 chr2 27324471 . C . PASS END=27324471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 27324472 . C . PASS END=27324525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1050:0,86,255:33,0 chr2 27324526 . T . PASS END=27324526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 27324527 . G . PASS END=27324528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 27324529 . T . PASS END=27324529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr2 27324530 . T . PASS END=27324531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27324532 . T . PASS END=27324534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 27324535 . T . PASS END=27324536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 27324537 . T . PASS END=27324538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27324539 . G . PASS END=27324577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1089:0,82,255:35,0 chr2 27324578 . T . PASS END=27324578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:33,0 chr2 27324579 . T . PASS END=27324581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:36:0,91,1227:0,91,255:38,0 chr2 27324582 . C . PASS END=27324582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1379:0,70,255:33,0 chr2 27324583 . T . PASS END=27324583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 27324584 . A . PASS END=27324584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1325:0,62,255:33,0 chr2 27324585 . A . PASS END=27324636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:32:0,81,1208:0,83,255:35,0 chr2 27324637 . C . PASS END=27324638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:72:35:0,72,1142:0,72,255:33,0 chr2 27324639 . C . PASS END=27324686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:36:0,92,1289:0,92,255:39,0 chr2 27324687 . C . PASS END=27324721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1235:0,91,255:38,0 chr2 27324722 . T . PASS END=27324722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr2 27324723 . G . PASS END=27324723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:26,0 chr2 27324724 . G C, 45.78 PASS DP=32;MQ=249.06;MQRankSum=4.652;ReadPosRankSum=0.058;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,12,0:0.375,0.000:32:10,9,0:10,3,0:45:81,0,50,429,679,1108:255,0,255:17,0:4.5784e+01,1.3642e-04,5.3000e+01,4.2934e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,9,3:7,13,6,6 chr2 27324725 . G . PASS END=27324730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 27324731 . A . PASS END=27324731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27324732 . G . PASS END=27324749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr2 27324750 . A . PASS END=27324750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:24,0 chr2 27324751 . G T, 42.93 PASS DP=27;MQ=248.89;MQRankSum=4.140;ReadPosRankSum=1.672;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,9,0:0.333,0.000:27:10,7,0:8,2,0:43:78,0,50,322,614,936:246,0,255:17,0:4.2927e+01,2.4308e-04,5.3000e+01,3.2193e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,13,8,1:9,9,6,3 chr2 27324752 . A . PASS END=27324756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,878:0,62,255:26,0 chr2 27324883 . C . PASS END=27325050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1139:0,80,255:40,0 chr2 27325051 . T . PASS END=27325052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,948:0,60,255:27,0 chr2 27325053 . T . PASS END=27325055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27325056 . T . PASS END=27325056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:26,0 chr2 27325057 . C . PASS END=27325058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27325059 . T . PASS END=27325077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,870:0,61,255:26,0 chr2 27325078 . G . PASS END=27325079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr2 27325080 . T . PASS END=27325080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 27325081 . A . PASS END=27325081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 27325082 . G . PASS END=27325083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27325084 . G . PASS END=27325085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27325086 . A . PASS END=27325089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27325228 . C . PASS END=27325237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 27325238 . G . PASS END=27325267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:13,0 chr2 27325268 . T . PASS END=27325278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 27325279 . T . PASS END=27325285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27325286 . G . PASS END=27325286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27325287 . C . PASS END=27325298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr2 27325394 . C . PASS END=27325398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 27325399 . C . PASS END=27325399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 27325400 . T . PASS END=27325402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 27325403 . T . PASS END=27325409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27325410 . C . PASS END=27325420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27325421 . G . PASS END=27325423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 27325424 . T . PASS END=27325426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27325427 . G . PASS END=27325430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27325431 . G . PASS END=27325434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27325435 . C . PASS END=27325436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,1 chr2 27325437 . G . PASS END=27325438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,1 chr2 27325439 . T . PASS END=27325447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:10:15:0,10,478:0,10,255:13,1 chr2 27325448 . T . PASS END=27325449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:7:14:0,7,447:0,7,255:12,1 chr2 27325450 . A . PASS END=27325459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 27327155 . C . PASS END=27327350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1158:0,81,255:40,0 chr2 27327351 . C . PASS END=27327351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr2 27327352 . A . PASS END=27327564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1180:0,82,255:40,0 chr2 27327565 . A . PASS END=27327580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:62:26:0,62,937:0,62,255:26,0 chr2 27327581 . A . PASS END=27327581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr2 27327582 . C . PASS END=27327583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 27327584 . T . PASS END=27327588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 27327589 . C . PASS END=27327589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr2 27327590 . A . PASS END=27327594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,759:0,47,255:19,0 chr2 27327595 . A . PASS END=27327595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:16,0 chr2 27327596 . T . PASS END=27327600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:16,0 chr2 27346817 . A . PASS END=27346823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,929:0,65,255:26,0 chr2 27346824 . G . PASS END=27346832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:30,0 chr2 27346833 . T . PASS END=27346833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 27346834 . G . PASS END=27346845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr2 27346846 . T . PASS END=27346846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1117:0,65,255:29,0 chr2 27346847 . G . PASS END=27346867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1030:0,82,255:31,0 chr2 27346868 . T . PASS END=27346871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1073:0,60,255:31,0 chr2 27346872 . T . PASS END=27346885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 27346886 . G . PASS END=27346892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr2 27346893 . C . PASS END=27346894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27346895 . C . PASS END=27346895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 27346896 . T . PASS END=27346896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:23,0 chr2 27346897 . C . PASS END=27346912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,886:0,64,255:25,0 chr2 27346913 . T . PASS END=27346913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr2 27346914 . G . PASS END=27346914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27346915 . G . PASS END=27346930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:19:0,46,698:0,46,255:19,0 chr2 27351309 . A . PASS END=27351309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27351310 . G . PASS END=27351316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1227:0,88,255:33,0 chr2 27351317 . G . PASS END=27351410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1194:0,83,255:40,0 chr2 27351411 . C . PASS END=27351411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1402:0,79,255:39,0 chr2 27351412 . G . PASS END=27351447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1136:0,85,255:38,0 chr2 27351448 . A . PASS END=27351466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:26:0,63,945:0,67,255:28,0 chr2 27351467 . G . PASS END=27351467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:21,0 chr2 27351468 . A . PASS END=27351469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 27351813 . T . PASS END=27351818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 27351819 . C . PASS END=27351820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr2 27351821 . T . PASS END=27351821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr2 27351822 . C . PASS END=27351910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:30:0,81,1101:0,81,255:40,0 chr2 27351911 . T . PASS END=27351947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,128,255:40,0 chr2 27351948 . T G, 203.50 PASS DP=52;MQ=249.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,32,0:0,20,0:154:241,157,0,2006,157,2006:255,157,0:0,0:2.0350e+02,1.5350e+02,0.0000e+00,4.5000e+02,1.8827e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,23:0,0,27,25 chr2 27351949 . A . PASS END=27351985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,132,255:40,0 chr2 27351986 . A . PASS END=27351995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,126,255:40,0 chr2 27352083 . A . PASS END=27352142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,114,1710:0,128,255:40,0 chr2 27352143 . C . PASS END=27352143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1845:0,79,255:40,0 chr2 27352144 . T . PASS END=27352229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,100,1690:0,100,255:40,0 chr2 27352382 . A . PASS END=27352494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:41:0,93,1407:0,93,255:40,0 chr2 27352622 . G . PASS END=27352632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:25,0 chr2 27352633 . T . PASS END=27352633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 27352634 . G . PASS END=27352638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 27352639 . A . PASS END=27352655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1202:0,83,255:32,0 chr2 27352656 . C . PASS END=27352656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr2 27352657 . A . PASS END=27352757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1097:0,82,255:37,0 chr2 27352758 . C . PASS END=27352758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr2 27352759 . A . PASS END=27352764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,86,255:30,0 chr2 27352765 . T . PASS END=27352765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:27,0 chr2 27352766 . C . PASS END=27352768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr2 27352769 . T . PASS END=27352769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1070:0,49,255:26,0 chr2 27352770 . G . PASS END=27352770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:27,0 chr2 27352771 . C . PASS END=27352771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:27,0 chr2 27352772 . T . PASS END=27352776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 27352777 . T . PASS END=27352795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,946:0,67,255:26,0 chr2 27352973 . A . PASS END=27353021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,114,1543:0,116,255:40,0 chr2 27353095 . C . PASS END=27353268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:81:31:0,81,1215:0,84,255:40,0 chr2 27353269 . T . PASS END=27353284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,73,255:26,0 chr2 27353401 . C . PASS END=27353549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,89,255:40,0 chr2 27353550 . C . PASS END=27353553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr2 27353554 . A . PASS END=27353556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 27353557 . C . PASS END=27353580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr2 27353581 . C . PASS END=27353610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,49,255:18,0 chr2 27353611 . G . PASS END=27353612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 27354235 . C . PASS END=27354376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,153,255:40,0 chr2 27354540 . G . PASS END=27354555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:30:0,84,1225:0,86,255:32,0 chr2 27354556 . A . PASS END=27354556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr2 27354557 . T . PASS END=27354637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:34:0,85,1113:0,85,255:40,0 chr2 27354638 . T . PASS END=27354638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:65:42:0,65,1489:0,65,255:34,0 chr2 27354639 . C . PASS END=27354683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1208:0,83,255:37,0 chr2 27354684 . T . PASS END=27354699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,984:0,65,255:26,0 chr2 27354878 . C . PASS END=27354950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,100,1334:0,100,255:40,0 chr2 27355083 . A . PASS END=27355089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 27355090 . T . PASS END=27355090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr2 27355091 . C . PASS END=27355091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 27355092 . T . PASS END=27355092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 27355093 . C . PASS END=27355133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:19,0 chr2 27355134 . G . PASS END=27355137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr2 27355138 . T . PASS END=27355138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 27355139 . G . PASS END=27355177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:23,0 chr2 27355178 . G . PASS END=27355178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 27355179 . A . PASS END=27355207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr2 27355208 . C . PASS END=27355215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,53,255:18,0 chr2 27355216 . G . PASS END=27355234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr2 27355235 . T . PASS END=27355267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr2 27355268 . A . PASS END=27355271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 27355471 . C . PASS END=27355476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27355477 . G . PASS END=27355477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 27355478 . C . PASS END=27355478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27355479 . C . PASS END=27355479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:27,0 chr2 27355480 . T . PASS END=27355480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27355481 . G . PASS END=27355481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 27355482 . G . PASS END=27355482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 27355483 . T . PASS END=27355484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 27355485 . G . PASS END=27355491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1180:0,85,255:33,0 chr2 27355492 . G . PASS END=27355500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1239:0,86,255:33,0 chr2 27355501 . G . PASS END=27355502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:37:0,45,1271:0,45,255:34,2 chr2 27355503 . A . PASS END=27355503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:35,0 chr2 27355504 . A . PASS END=27355572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:32:0,84,1260:0,95,255:37,0 chr2 27355573 . A . PASS END=27355574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 27355575 . G . PASS END=27355577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr2 27355578 . C . PASS END=27355585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,1078:0,63,255:25,0 chr2 27355586 . C . PASS END=27355586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:23,0 chr2 27355587 . G . PASS END=27355590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:24,0 chr2 27355591 . A . PASS END=27355591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:21,0 chr2 27355592 . C . PASS END=27355595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 27355711 . C . PASS END=27355711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27355712 . T . PASS END=27355712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,784:0,34,255:23,0 chr2 27355713 . T . PASS END=27355713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,925:0,53,255:23,0 chr2 27355714 . G . PASS END=27355714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:24,0 chr2 27355715 . C . PASS END=27355715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:24,0 chr2 27355716 . C . PASS END=27355716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27355717 . A . PASS END=27355717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr2 27355718 . T . PASS END=27355718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,894:0,21,255:25,0 chr2 27355719 . C . PASS END=27355720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,934:0,60,255:28,0 chr2 27355721 . G . PASS END=27355729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 27355730 . G . PASS END=27355730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,928:0,27,255:25,0 chr2 27355731 . C . PASS END=27355733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 27355734 . G . PASS END=27355734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr2 27355735 . G . PASS END=27355735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 27355736 . T . PASS END=27355737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 27355738 . T . PASS END=27355738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 27355739 . T . PASS END=27355741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr2 27355742 . A . PASS END=27355744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 27355745 . T . PASS END=27355745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 27355746 . C . PASS END=27355752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:31,0 chr2 27355753 . G . PASS END=27355753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:30,0 chr2 27355754 . T . PASS END=27355754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 27355755 . G . PASS END=27355755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 27355756 . G . PASS END=27355764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,984:0,82,255:33,0 chr2 27355765 . C . PASS END=27355765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:31,0 chr2 27355766 . T . PASS END=27355769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1172:0,85,255:32,0 chr2 27355770 . G . PASS END=27355770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:29,0 chr2 27355771 . A . PASS END=27355774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1166:0,85,255:30,0 chr2 27355775 . T . PASS END=27355775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1076:0,52,255:29,0 chr2 27355776 . T . PASS END=27355778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1152:0,66,255:31,0 chr2 27355779 . C . PASS END=27355782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:30,0 chr2 27355783 . G . PASS END=27355783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:30,0 chr2 27355784 . C . PASS END=27355791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1186:0,83,255:30,0 chr2 27355985 . C . PASS END=27356205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:31:0,83,1127:0,83,255:40,0 chr2 27356400 . C . PASS END=27356427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1094:0,87,255:32,0 chr2 27356428 . T . PASS END=27356428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1097:0,60,255:30,0 chr2 27356429 . T . PASS END=27356487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1196:0,92,255:36,0 chr2 27356488 . A . PASS END=27356488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:32,0 chr2 27356489 . C . PASS END=27356497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1357:0,84,255:34,0 chr2 27356498 . G . PASS END=27356498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1263:0,61,255:32,0 chr2 27356499 . C . PASS END=27356501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1305:0,92,255:33,0 chr2 27356502 . A . PASS END=27356502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:27,0 chr2 27356503 . G . PASS END=27356511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:29,0 chr2 27356512 . G . PASS END=27356515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr2 27356516 . C . PASS END=27356516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 27356517 . G . PASS END=27356517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27356518 . T . PASS END=27356518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 27356519 . G . PASS END=27356523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27356524 . T . PASS END=27356542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:24,0 chr2 27356543 . A . PASS END=27356543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 27356544 . A . PASS END=27356565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 27356566 . A . PASS END=27356566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr2 27356567 . A . PASS END=27356567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27356568 . T . PASS END=27356589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,653:0,51,255:18,0 chr2 27357155 . C . PASS END=27357163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,846:0,72,255:25,0 chr2 27357164 . C . PASS END=27357164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr2 27357165 . T . PASS END=27357168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 27357169 . T . PASS END=27357174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:28,0 chr2 27357175 . T . PASS END=27357175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 27357176 . C . PASS END=27357184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 27357185 . G . PASS END=27357185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 27357186 . C . PASS END=27357206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1017:0,81,255:31,0 chr2 27357207 . A . PASS END=27357212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27357213 . C . PASS END=27357224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,83,255:28,0 chr2 27357225 . T . PASS END=27357227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1078:0,74,255:27,0 chr2 27357228 . A . PASS END=27357234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27357235 . G . PASS END=27357262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr2 27357263 . C . PASS END=27357265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 27357266 . C . PASS END=27357267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27357268 . C . PASS END=27357270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27357271 . G . PASS END=27357278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27357279 . C . PASS END=27357279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 27357280 . G . PASS END=27357280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:18,0 chr2 27357281 . C . PASS END=27357282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27357283 . G . PASS END=27357289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 27359783 . T . PASS END=27359794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 27359795 . C . PASS END=27359831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,520:0,42,255:19,0 chr2 27359832 . G . PASS END=27359832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27359833 . G . PASS END=27359859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:19,0 chr2 27359860 . A . PASS END=27359860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:17,0 chr2 27359861 . G . PASS END=27359869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:19,0 chr2 27359870 . G . PASS END=27359871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27359872 . T . PASS END=27359878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,672:0,44,255:19,0 chr2 27359879 . G . PASS END=27359879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,743:0,27,255:16,0 chr2 27359880 . G . PASS END=27359884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 27359885 . C . PASS END=27359892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:20,0 chr2 27359893 . T . PASS END=27359893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,613:0,43,255:19,0 chr2 27359894 . C . PASS END=27359895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr2 27359896 . G . PASS END=27359896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 27359897 . G . PASS END=27359899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 27359900 . C . PASS END=27359900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 27359901 . C . PASS END=27359901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 27359902 . T . PASS END=27359902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,585:0,43,255:19,0 chr2 27359903 . G . PASS END=27359910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 27359911 . G . PASS END=27359945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,597:0,40,255:19,0 chr2 27359946 . C . PASS END=27359955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:15:0,36,540:0,37,255:13,0 chr2 27359956 . G . PASS END=27359959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 27359960 . T . PASS END=27359960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 27359961 . A . PASS END=27359984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:16,0 chr2 27359985 . G . PASS END=27359985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr2 27359986 . C . PASS END=27360042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,492:0,45,255:19,0 chr2 27360043 . G . PASS END=27360045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 27360046 . C . PASS END=27360047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27360048 . G . PASS END=27360060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 27360061 . A . PASS END=27360061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 27360062 . G . PASS END=27360080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,914:0,69,255:24,0 chr2 27360081 . A . PASS END=27360081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr2 27360082 . T . PASS END=27360092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 27360093 . T . PASS END=27360093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:18,0 chr2 27360094 . T . PASS END=27360107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr2 27360108 . C . PASS END=27360110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 27360111 . C . PASS END=27360136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr2 27360137 . G . PASS END=27360138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 27360139 . T . PASS END=27360189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr2 27360190 . T . PASS END=27360190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 27360191 . G . PASS END=27360272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,499:0,45,255:19,0 chr2 27360273 . C . PASS END=27360277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27360278 . G . PASS END=27360284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27360285 . C . PASS END=27360348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,426:0,33,255:13,0 chr2 27360349 . A . PASS END=27360349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 27360350 . C . PASS END=27360351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27360352 . G . PASS END=27360381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr2 27360382 . G . PASS END=27360383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 27360384 . G . PASS END=27360385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 27360386 . C . PASS END=27360388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27360389 . G . PASS END=27360441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,552:0,48,255:19,0 chr2 27360442 . G . PASS END=27360447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 27360448 . A . PASS END=27360457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 27360458 . A . PASS END=27360459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr2 27360460 . G . PASS END=27360460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 27360461 . A . PASS END=27360461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,0 chr2 27360462 . C . PASS END=27360462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 27360463 . T . PASS END=27360463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 27360464 . G . PASS END=27360487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 27360488 . C . PASS END=27360489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27360490 . C . PASS END=27360491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 27360492 . G . PASS END=27360498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:15:0,34,574:0,34,255:13,0 chr2 27360499 . C . PASS END=27360505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr2 27360506 . A . PASS END=27360507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27360508 . T . PASS END=27360508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27360509 . A . PASS END=27360516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 27360517 . G . PASS END=27360526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 27360527 . A . PASS END=27360541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr2 27360542 . A . PASS END=27360544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 27360545 . T . PASS END=27360559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 27360560 . T . PASS END=27360560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 27360561 . G . PASS END=27360561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 27360562 . G . PASS END=27360575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:15,0 chr2 27360576 . G . PASS END=27360588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:13:0,30,450:0,39,255:13,0 chr2 27360589 . T . PASS END=27360589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr2 27360590 . G . PASS END=27360596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 27360597 . C . PASS END=27360597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 27360598 . C . PASS END=27360608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 27360609 . G . PASS END=27360696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,498:0,42,255:19,0 chr2 27360697 . A . PASS END=27360697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27360698 . T . PASS END=27360701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27360702 . A . PASS END=27360708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27360709 . G . PASS END=27360710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 27360711 . T . PASS END=27360713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27360714 . G . PASS END=27360722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,714:0,46,255:19,0 chr2 27360723 . A . PASS END=27360723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27360724 . A . PASS END=27360724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 27360725 . G . PASS END=27360726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 27360727 . G . PASS END=27360728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,792:0,52,255:19,0 chr2 27360729 . G . PASS END=27360730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27360731 . G . PASS END=27360732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 27360733 . G . PASS END=27360741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 27360742 . C . PASS END=27360743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,754:0,52,255:21,0 chr2 27360744 . G . PASS END=27360746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27360747 . C . PASS END=27360748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 27360749 . T . PASS END=27360749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27360750 . C . PASS END=27360750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr2 27360751 . G . PASS END=27360762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27360763 . G . PASS END=27360763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 27360764 . G . PASS END=27360765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 27360766 . C . PASS END=27360767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27360768 . G . PASS END=27360775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 27360776 . G . PASS END=27360777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,759:0,47,255:20,0 chr2 27360778 . G . PASS END=27360778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 27360779 . T . PASS END=27360779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 27360780 . G . PASS END=27360781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 27360782 . G . PASS END=27360783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,759:0,47,255:21,0 chr2 27360784 . A . PASS END=27360784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27360785 . A . PASS END=27360785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,782:0,17,255:21,0 chr2 27360786 . G . PASS END=27360787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 27360788 . G . PASS END=27360788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr2 27360789 . A . PASS END=27360789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,726:0,22,255:18,0 chr2 27360790 . G . PASS END=27360791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27360792 . A . PASS END=27360794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 27360795 . T . PASS END=27360795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 27360796 . C . PASS END=27360796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,759:0,3,255:19,0 chr2 27360797 . T . PASS END=27360797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 27360798 . G . PASS END=27360798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 27360799 . A . PASS END=27360799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:20,0 chr2 27360800 . G . PASS END=27360800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 27360801 . G . PASS END=27360801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 27360802 . C . PASS END=27360802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,644:0,33,255:19,0 chr2 27360803 . T . PASS END=27360804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 27360805 . G . PASS END=27360806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,729:0,49,255:20,0 chr2 27360807 . A . PASS END=27360807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,685:0,35,255:18,0 chr2 27360808 . G . PASS END=27360811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,701:0,49,255:19,0 chr2 27360812 . G . PASS END=27360812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:17,0 chr2 27360813 . A . PASS END=27360815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 27360816 . A . PASS END=27360816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,666:0,33,255:17,0 chr2 27360817 . G . PASS END=27360818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 27360819 . A . PASS END=27360819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:17,0 chr2 27360820 . A . PASS END=27360820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,541:0,10,255:16,0 chr2 27360821 . G . PASS END=27360823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,662:0,46,255:19,0 chr2 27360824 . G . PASS END=27360825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,738:0,60,255:21,0 chr2 27360826 . C . PASS END=27360828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:19,0 chr2 27360829 . A . PASS END=27360829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,609:0,32,255:18,0 chr2 27360830 . G . PASS END=27360833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 27360834 . G . PASS END=27360834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr2 27360835 . A . PASS END=27360835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27360836 . G . PASS END=27360839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,677:0,49,255:19,0 chr2 27360840 . G . PASS END=27360843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27360844 . C . PASS END=27360844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:19,0 chr2 27360845 . A . PASS END=27360845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 27360846 . G . PASS END=27360847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 27360848 . C . PASS END=27360849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr2 27360850 . G . PASS END=27360861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,648:0,60,255:23,0 chr2 27360862 . A . PASS END=27360862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 27360863 . G . PASS END=27360865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 27360866 . G . PASS END=27360866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 27360867 . A . PASS END=27360867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 27360868 . T . PASS END=27360869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,750:0,42,255:20,0 chr2 27360870 . C . PASS END=27360883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,848:0,61,255:24,0 chr2 27360884 . A . PASS END=27360884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 27360885 . G . PASS END=27360890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,793:0,72,255:25,0 chr2 27360891 . G . PASS END=27360891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr2 27360892 . G . PASS END=27360892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,850:0,75,255:25,0 chr2 27360893 . T . PASS END=27360893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:23,0 chr2 27360894 . A . PASS END=27360894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr2 27360895 . G . PASS END=27360895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,817:0,48,255:25,0 chr2 27360896 . T . PASS END=27360896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 27360897 . T . PASS END=27360897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,868:0,48,255:25,0 chr2 27360898 . C . PASS END=27360902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 27360903 . G . PASS END=27360903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 27360904 . A . PASS END=27360905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 27360906 . A . PASS END=27360912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 27360913 . A . PASS END=27360913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:24,0 chr2 27360914 . G . PASS END=27360927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,856:0,61,255:25,0 chr2 27360928 . A . PASS END=27360933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,58,255:21,0 chr2 27360934 . A . PASS END=27360934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 27360935 . G . PASS END=27360936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:48:29:0,48,939:0,48,255:24,0 chr2 27360937 . A . PASS END=27360938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 27360939 . A . PASS END=27360939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:24,0 chr2 27360940 . G . PASS END=27360946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,805:0,62,255:25,0 chr2 27360947 . G . PASS END=27360947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:24,0 chr2 27360948 . G . PASS END=27360949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 27360950 . G . PASS END=27360950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,880:0,64,255:26,0 chr2 27360951 . C . PASS END=27360951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 27360952 . A . PASS END=27360953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 27360954 . A . PASS END=27360958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,924:0,81,255:27,0 chr2 27360959 . G . PASS END=27360959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 27360960 . A . PASS END=27360967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27360968 . T . PASS END=27360968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 27360969 . C . PASS END=27360970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27360971 . C . PASS END=27360972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 27360973 . A . PASS END=27360975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 27360976 . G . PASS END=27360976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 27360977 . C . PASS END=27360978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27360979 . G . PASS END=27360988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,939:0,64,255:26,0 chr2 27360989 . C . PASS END=27360989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27360990 . C . PASS END=27360990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27360991 . A . PASS END=27360991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,918:0,48,255:25,0 chr2 27360992 . G . PASS END=27361007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,787:0,64,255:26,0 chr2 27361008 . G . PASS END=27361014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,942:0,81,255:28,0 chr2 27361015 . G . PASS END=27361015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 27361016 . G . PASS END=27361016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 27361017 . A . PASS END=27361017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr2 27361018 . G . PASS END=27361018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27361019 . G . PASS END=27361019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 27361020 . A . PASS END=27361032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:30,0 chr2 27361033 . C . PASS END=27361033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:27,0 chr2 27361034 . T . PASS END=27361037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:30,0 chr2 27361038 . T . PASS END=27361038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:27,0 chr2 27361039 . G . PASS END=27361045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:33:0,87,1211:0,88,255:32,0 chr2 27361046 . A . PASS END=27361047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1019:0,66,255:30,0 chr2 27361048 . C . PASS END=27361104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1073:0,80,255:33,0 chr2 27361105 . A . PASS END=27361105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 27361106 . G . PASS END=27361106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 27361107 . A . PASS END=27361107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:29,0 chr2 27361108 . G . PASS END=27361110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1147:0,90,255:30,0 chr2 27361111 . G . PASS END=27361112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1008:0,74,255:30,0 chr2 27361113 . C . PASS END=27361151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1210:0,90,255:32,0 chr2 27361152 . G . PASS END=27361154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 27361155 . C . PASS END=27361157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27361158 . A . PASS END=27361188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr2 27361189 . A . PASS END=27361189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:21,0 chr2 27361190 . G . PASS END=27361197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 27372002 . A . PASS END=27372004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 27372005 . T . PASS END=27372006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 27372007 . A . PASS END=27372007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 27372008 . C . PASS END=27372009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 27372010 . G . PASS END=27372025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr2 27372026 . C . PASS END=27372027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 27372028 . A . PASS END=27372028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27372029 . C . PASS END=27372034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 27372035 . A . PASS END=27372035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 27372036 . T . PASS END=27372167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:82:29:0,82,1086:0,82,255:40,0 chr2 27372168 . G . PASS END=27372182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:25:0,69,1035:0,75,255:25,0 chr2 27372183 . G . PASS END=27372183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 27372184 . C . PASS END=27372193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr2 27372194 . A . PASS END=27372207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:18:0,42,630:0,54,255:19,0 chr2 27372208 . C . PASS END=27372208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 27372209 . C . PASS END=27372223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 27372991 . A . PASS END=27373025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:17,0 chr2 27373026 . G . PASS END=27373026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr2 27373027 . A . PASS END=27373045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:19,0 chr2 27373046 . G . PASS END=27373080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:22,0 chr2 27373081 . G . PASS END=27373084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27373085 . T . PASS END=27373102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 27373103 . T . PASS END=27373146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 27373147 . C . PASS END=27373150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27373151 . T . PASS END=27373153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 27373154 . C . PASS END=27373169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr2 27373170 . C . PASS END=27373173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27373174 . T . PASS END=27373174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:17,0 chr2 27373175 . T . PASS END=27373192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr2 27373193 . C . PASS END=27373194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 27373195 . C . PASS END=27373209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 27373210 . C . PASS END=27373225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr2 27373226 . C . PASS END=27373229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27373230 . C . LowGQ END=27373230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:26,0,255:11,0 chr2 27373231 . A . PASS END=27373233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27375556 . A . PASS END=27375562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:23,0 chr2 27375563 . C . PASS END=27375563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr2 27375564 . G . PASS END=27375568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,986:0,72,255:26,0 chr2 27375569 . G . PASS END=27375735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:27:0,81,1039:0,81,255:40,0 chr2 27375762 . A . PASS END=27375827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,144,255:40,0 chr2 27423258 . C . PASS END=27423402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1212:0,86,255:40,0 chr2 27423403 . A . PASS END=27423426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:26,0 chr2 27423427 . C . PASS END=27423427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 27423428 . A . PASS END=27423431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27423432 . C . PASS END=27423445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:17,0 chr2 27423446 . T . PASS END=27423447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27423866 . C . PASS END=27423981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,100,1665:0,100,255:40,0 chr2 27424218 . C . PASS END=27424220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 27424221 . T . PASS END=27424221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr2 27424222 . G . PASS END=27424238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 27424239 . G . PASS END=27424239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 27424240 . G . PASS END=27424248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:26,0 chr2 27424249 . A . PASS END=27424256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:30,0 chr2 27424257 . T . PASS END=27424257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 27424258 . G . PASS END=27424285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1036:0,86,255:32,0 chr2 27424286 . T . PASS END=27424286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 27424287 . A . PASS END=27424296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 27424297 . A . PASS END=27424297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:27,0 chr2 27424298 . T . PASS END=27424299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 27424300 . G . PASS END=27424300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 27424301 . A . PASS END=27424304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,950:0,84,255:28,0 chr2 27424305 . G . PASS END=27424306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 27424307 . T . PASS END=27424308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27424309 . C . PASS END=27424317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,68,255:26,0 chr2 27424318 . G . PASS END=27424321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:27:0,45,810:0,45,255:18,0 chr2 27424534 . T . PASS END=27424598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,146,255:40,0 chr2 27424599 . G . PASS END=27424635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,165,255:40,0 chr2 27424636 . G A, 50.00 PASS DP=61;MQ=248.61;MQRankSum=5.361;ReadPosRankSum=3.122;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,34,0:0.576,0.000:59:12,17,0:13,17,0:48:85,0,48,1149,894,2043:255,0,255:22,0:5.0000e+01,7.6623e-05,5.1157e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,14,15,19:14,11,16,18 chr2 27424637 . A . PASS END=27424673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,103,1710:0,103,255:40,0 chr2 27424674 . G . PASS END=27424715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:34:0,93,1280:0,101,255:40,0 chr2 27424856 . A . PASS END=27424942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,114,1706:0,114,255:40,0 chr2 27425681 . C . PASS END=27425690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 27425691 . G . PASS END=27425698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 27425699 . C . PASS END=27425699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 27425700 . T . PASS END=27425705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 27425706 . G . PASS END=27425708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 27425709 . A . PASS END=27425709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27425710 . T . PASS END=27425711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 27425712 . T . PASS END=27425714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27425715 . G . PASS END=27425715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 27425716 . C . PASS END=27425727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr2 27425728 . A . PASS END=27425728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1084:0,55,255:29,0 chr2 27425729 . A . PASS END=27425748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:30,0 chr2 27426101 . C . PASS END=27426208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:38:0,87,1305:0,96,255:40,0 chr2 27426209 . T . PASS END=27426209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:62:41:0,62,1382:0,62,255:26,0 chr2 27426210 . A . PASS END=27426213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:34:0,81,1215:0,81,255:28,0 chr2 27426647 . C . PASS END=27426654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,951:0,81,255:29,0 chr2 27426655 . G . PASS END=27426655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr2 27426656 . C . PASS END=27426661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 27426662 . A . PASS END=27426662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 27426663 . A . PASS END=27426668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,983:0,87,255:31,0 chr2 27426669 . A . PASS END=27426669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 27426670 . G . PASS END=27426700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1125:0,80,255:32,0 chr2 27426701 . C . PASS END=27426722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:25:0,64,909:0,64,255:26,0 chr2 27426723 . A . PASS END=27426723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr2 27426724 . G . PASS END=27426735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,886:0,72,255:24,0 chr2 27427329 . C . PASS END=27427341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:22:0,63,853:0,66,255:27,0 chr2 27427342 . G . PASS END=27427352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:28,0 chr2 27427353 . C . PASS END=27427353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 27427354 . T . PASS END=27427384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1163:0,86,255:36,0 chr2 27427385 . C . PASS END=27427385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr2 27427386 . G . PASS END=27427439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1202:0,86,255:34,0 chr2 27427440 . G . PASS END=27427458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,900:0,63,255:22,0 chr2 27427659 . A . PASS END=27427667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,114,1429:0,114,255:40,0 chr2 27427668 . G . PASS END=27427668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1659:0,64,255:40,0 chr2 27427669 . C . PASS END=27427799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:36:0,84,1260:0,92,255:40,0 chr2 27428218 . T . PASS END=27428257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:37:0,99,1388:0,99,255:40,0 chr2 27428258 . A . PASS END=27428294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,131,255:40,0 chr2 27428295 . A G, 205.58 PASS DP=53;MQ=249.21;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,33,0:0,20,0:156:243,159,0,343,343,343:255,159,0:0,0:2.0558e+02,1.5558e+02,0.0000e+00,3.4035e+02,3.7512e+02,3.4336e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,26,27:0,0,30,23 chr2 27428296 . A . PASS END=27428332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:46:0,93,1668:0,93,255:40,0 chr2 27428333 . T . PASS END=27428358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1215:0,96,255:40,0 chr2 27428359 . G . PASS END=27428368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,90,255:25,0 chr2 27428369 . C . PASS END=27428370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:27:0,57,855:0,81,255:19,0 chr2 27428371 . C . PASS END=27428372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 27428894 . C . PASS END=27428914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,112,1584:0,112,255:40,0 chr2 27428915 . G . PASS END=27428961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,143,255:40,0 chr2 27429351 . C . PASS END=27429402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,130,255:40,0 chr2 27429745 . C . PASS END=27429810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,117,1755:0,130,255:40,0 chr2 27430126 . C . PASS END=27430128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:33,0 chr2 27430129 . A . PASS END=27430133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1118:0,63,255:32,0 chr2 27430134 . C . PASS END=27430134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1197:0,99,255:33,0 chr2 27430135 . A . PASS END=27430136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1097:0,60,255:32,0 chr2 27430137 . T . PASS END=27430137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1086:0,44,255:31,0 chr2 27430138 . G . PASS END=27430138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1135:0,63,255:33,0 chr2 27430139 . G . PASS END=27430139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:33,0 chr2 27430140 . T . PASS END=27430140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:32,0 chr2 27430141 . G . PASS END=27430141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:32,0 chr2 27430142 . A . PASS END=27430143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:32,0 chr2 27430144 . A . PASS END=27430144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1042:0,46,255:32,0 chr2 27430145 . T . PASS END=27430145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 27430146 . G . PASS END=27430208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:34:0,89,1234:0,89,255:40,0 chr2 27430209 . A . PASS END=27430209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:39,0 chr2 27430210 . G . PASS END=27430489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1260:0,93,255:40,0 chr2 27430490 . G . PASS END=27430492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 27430493 . G . PASS END=27430502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr2 27430503 . T . PASS END=27430504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27430505 . A . PASS END=27430510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 27430511 . A . PASS END=27430518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,68,255:25,0 chr2 27435072 . A . PASS END=27435113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,825:0,69,255:24,0 chr2 27435114 . A . PASS END=27435114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 27435115 . G . PASS END=27435115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27435116 . C . PASS END=27435137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:18:0,42,630:0,54,255:19,0 chr2 27435138 . G . PASS END=27435138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr2 27435139 . G . PASS END=27435140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 27435141 . C . PASS END=27435146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:13,0 chr2 27435147 . G . PASS END=27435147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:11,0 chr2 27435148 . G . PASS END=27435151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:36:16:0,36,540:0,41,255:13,0 chr2 27435152 . C . PASS END=27435160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:17,0 chr2 27435161 . A . PASS END=27435162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 27435163 . G . PASS END=27435192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr2 27435193 . C . PASS END=27435194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27435195 . G . PASS END=27435212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 27435213 . A . PASS END=27435224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr2 27435225 . A . PASS END=27435225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:15,0 chr2 27435226 . G . PASS END=27435249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr2 27435250 . A G, 92.15 PASS DP=15;MQ=248.97;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,11,0:0,4,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,10:0,0,7,8 chr2 27435251 . C . PASS END=27435256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr2 27435257 . T . PASS END=27435265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,495:0,32,255:13,0 chr2 27435266 . G . PASS END=27435266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:10,0 chr2 27435267 . A . PASS END=27435287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:12,0 chr2 27435288 . G . PASS END=27435288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 27435289 . C . PASS END=27435289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr2 27435290 . C . PASS END=27435291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 27435292 . T . PASS END=27435292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 27435293 . G . PASS END=27435293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 27435294 . C . PASS END=27435294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 27435295 . T . PASS END=27435296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 27435297 . C . PASS END=27435297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 27435298 . T . PASS END=27435298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 27435299 . C . PASS END=27435324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 27435325 . C . PASS END=27435325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 27435326 . G . PASS END=27435332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr2 27435333 . G . PASS END=27435335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 27436045 . A . PASS END=27436166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,103,1376:0,103,255:40,0 chr2 27438189 . G . PASS END=27438260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,108,1574:0,108,255:40,0 chr2 27438342 . A . PASS END=27438413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1241:0,86,255:38,0 chr2 27438500 . G . PASS END=27438618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:40:0,87,1305:0,100,255:40,0 chr2 27438619 . C . PASS END=27438621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,95,255:25,0 chr2 27439391 . A . PASS END=27439488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,111,1665:0,120,255:40,0 chr2 27439712 . G . PASS END=27439816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:35:0,81,1302:0,81,255:40,0 chr2 27440420 . A . PASS END=27440420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:13,0 chr2 27440421 . T . PASS END=27440429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:18,0 chr2 27440430 . T . PASS END=27440430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 27440431 . A . PASS END=27440431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 27440432 . G . PASS END=27440435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 27440436 . T . PASS END=27440436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 27440437 . G . PASS END=27440441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr2 27440442 . A . PASS END=27440449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr2 27440450 . G . PASS END=27440450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27440451 . T . PASS END=27440465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,690:0,57,255:19,0 chr2 27440466 . C . PASS END=27440501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr2 27440745 . T . PASS END=27440747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1133:0,90,255:33,0 chr2 27440748 . T . PASS END=27440784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1202:0,83,255:40,0 chr2 27440785 . C T, 178.97 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,14,0:0,30,0:129:217,132,0,1677,132,1677:255,132,0:0,0:1.7897e+02,1.2897e+02,0.0000e+00,4.5000e+02,1.6374e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,22:0,0,26,18 chr2 27440786 . G . PASS END=27440822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,114,1629:0,119,255:40,0 chr2 27440823 . A . PASS END=27440877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1215:0,93,255:40,0 chr2 27440878 . C . PASS END=27440884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:25,0 chr2 27444086 . T . PASS END=27444086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 27444087 . G . PASS END=27444105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,926:0,84,255:31,0 chr2 27444106 . C . PASS END=27444106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 27444107 . C . PASS END=27444205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1157:0,82,255:38,0 chr2 27444206 . G . PASS END=27444206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 27444207 . G . PASS END=27444207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27444208 . C . PASS END=27444215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr2 27445062 . G . PASS END=27445159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1302:0,84,255:40,0 chr2 27445160 . T . PASS END=27445160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr2 27445161 . T . PASS END=27445179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,92,255:35,0 chr2 27445180 . C . PASS END=27445193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:32:0,66,990:0,96,255:26,0 chr2 27445194 . T . PASS END=27445194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,971:0,51,255:25,0 chr2 27445195 . C . PASS END=27445201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:24,0 chr2 27445202 . A . PASS END=27445204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,67,255:19,0 chr2 27445211 . A . PASS END=27445211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:14,0 chr2 27445387 . A . PASS END=27445528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:36:0,95,1341:0,95,255:40,0 chr2 27445734 . A . PASS END=27445735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27445736 . T . PASS END=27445736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 27445737 . A . PASS END=27445740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 27445741 . G . PASS END=27445741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 27445742 . G . PASS END=27445743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27445744 . T . PASS END=27445744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 27445745 . C . PASS END=27445745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 27445746 . T . PASS END=27445748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:28,0 chr2 27445749 . T . PASS END=27445749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:27,0 chr2 27445750 . C . PASS END=27445763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1057:0,87,255:31,0 chr2 27445764 . C . PASS END=27445764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 27445765 . T . PASS END=27445876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1133:0,81,255:40,0 chr2 27445877 . G . PASS END=27445877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1341:0,70,255:29,0 chr2 27445878 . C . PASS END=27445894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1149:0,82,255:32,0 chr2 27445895 . T . PASS END=27445895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:26,0 chr2 27445896 . A . PASS END=27445898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 27445899 . A . PASS END=27445901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1016:0,60,255:28,0 chr2 27445902 . T . PASS END=27445902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 27445903 . G . PASS END=27445903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 27445904 . A . PASS END=27445904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:26,0 chr2 27445905 . G . PASS END=27445905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27446431 . A . PASS END=27446431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:23,0 chr2 27446432 . T . PASS END=27446438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr2 27446439 . A . PASS END=27446441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,897:0,81,255:27,0 chr2 27446442 . G . PASS END=27446443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27446444 . G . PASS END=27446589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1215:0,89,255:40,0 chr2 27446590 . T . PASS END=27446601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:71:29:0,71,1016:0,71,255:26,0 chr2 27446602 . C . PASS END=27446602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:24,0 chr2 27446603 . T . PASS END=27446616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:26,0 chr2 27446785 . T . PASS END=27446897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,105,1665:0,105,255:40,1 chr2 27447213 . T . PASS END=27447222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 27447223 . G . PASS END=27447223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 27447224 . C . PASS END=27447257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,543:0,45,255:19,0 chr2 27447258 . C . PASS END=27447299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr2 27447300 . T . PASS END=27447300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 27447301 . G . PASS END=27447307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 27447308 . G . PASS END=27447358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,590:0,51,255:19,0 chr2 27447613 . G . PASS END=27447744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,117,1755:0,121,255:40,0 chr2 27447878 . G . PASS END=27447896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr2 27447897 . C . PASS END=27447900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 27447901 . T . PASS END=27447901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 27447902 . G . PASS END=27447909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 27447910 . A . PASS END=27447911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 27447912 . T . PASS END=27447912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27447913 . G . PASS END=27447913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27447914 . A . PASS END=27447927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr2 27447928 . G . PASS END=27447958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,917:0,67,255:26,0 chr2 27447959 . A . PASS END=27447959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 27447960 . A . PASS END=27447967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:24,0 chr2 27447968 . G . PASS END=27447968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 27447969 . T . PASS END=27447990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,900:0,61,255:26,0 chr2 27447991 . G . PASS END=27447991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 27447992 . G . PASS END=27447993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:22,0 chr2 27447994 . C . PASS END=27447994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:21,0 chr2 27447995 . C . PASS END=27447999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:22,0 chr2 27448000 . C . PASS END=27448001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 27448002 . C . PASS END=27448012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:24,0 chr2 27448013 . A . PASS END=27448013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 27448014 . C . PASS END=27448065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:25,0 chr2 27448066 . C . PASS END=27448066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr2 27448067 . G . PASS END=27448067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 27448068 . G . PASS END=27448094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr2 27448095 . C . PASS END=27448095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 27448096 . A . PASS END=27448098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27448099 . T . PASS END=27448101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 27448102 . T . PASS END=27448102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:16,0 chr2 27448103 . C . PASS END=27448104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:18,0 chr2 27448105 . T . PASS END=27448105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:15,0 chr2 27448106 . G . PASS END=27448108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,50,255:17,0 chr2 27448109 . C . PASS END=27448111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:12,0 chr2 27448573 . G . PASS END=27448585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr2 27448586 . C . PASS END=27448595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr2 27448596 . G . PASS END=27448596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27448597 . G . PASS END=27448600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27448601 . A . PASS END=27448605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 27448606 . G . PASS END=27448749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1159:0,83,255:40,0 chr2 27448750 . A . PASS END=27448750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:29,0 chr2 27448751 . T . PASS END=27448751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 27448752 . T . PASS END=27448752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1193:0,75,255:30,0 chr2 27448753 . G . PASS END=27448757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:33:0,91,1235:0,91,255:32,0 chr2 27448758 . C . PASS END=27448776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:27:0,66,990:0,80,255:25,0 chr2 27448777 . T . PASS END=27448777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:22,0 chr2 27448778 . A . PASS END=27448783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr2 27448784 . A . PASS END=27448794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:24:0,45,675:0,55,255:18,0 chr2 27448996 . C . PASS END=27448996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27448998 . G . PASS END=27449022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1239:0,89,255:38,0 chr2 27449023 . C . PASS END=27449023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1276:0,75,255:36,0 chr2 27449024 . C . PASS END=27449187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:37:0,84,1260:0,93,255:40,0 chr2 27449393 . T . PASS END=27449517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,85,255:40,0 chr2 27449700 . G . PASS END=27449830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:82:32:0,82,1126:0,82,255:40,0 chr2 27454336 . G . PASS END=27454421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,87,255:40,0 chr2 27454422 . C . PASS END=27454428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 27454429 . T . PASS END=27454430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27454431 . A . PASS END=27454448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,67,255:26,0 chr2 27454848 . G . PASS END=27454860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,554:0,40,255:19,0 chr2 27454861 . C . PASS END=27454898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,662:0,60,255:26,0 chr2 27454899 . T . PASS END=27454903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 27454904 . T . PASS END=27454907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 27454908 . T . PASS END=27455037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1131:0,83,255:36,0 chr2 27455038 . A . PASS END=27455038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 27455039 . A . PASS END=27455039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27455040 . C . PASS END=27455044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 27455045 . C . PASS END=27455046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27455047 . A . PASS END=27455092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,720:0,61,255:26,0 chr2 27455309 . A . PASS END=27455309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 27455316 . C . PASS END=27455322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:29,0 chr2 27455323 . C . PASS END=27455324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 27455325 . G . PASS END=27455325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27455326 . G . PASS END=27455326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 27455327 . C . PASS END=27455329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 27455330 . T . PASS END=27455330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:29,0 chr2 27455331 . T . PASS END=27455342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1174:0,83,255:35,0 chr2 27455343 . T . PASS END=27455343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1156:0,75,255:33,0 chr2 27455344 . C . PASS END=27455350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1298:0,80,255:38,0 chr2 27455351 . T . PASS END=27455351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1379:0,70,255:36,0 chr2 27455352 . G . PASS END=27455498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1305:0,98,255:40,0 chr2 27455499 . C . PASS END=27455505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,77,255:23,0 chr2 27455506 . G . PASS END=27455506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:22,0 chr2 27455507 . G . PASS END=27455512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,848:0,72,255:24,0 chr2 27455513 . G . PASS END=27455513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr2 27455514 . C . PASS END=27455519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:24,0 chr2 27455520 . A . PASS END=27455520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:23,0 chr2 27455521 . T . PASS END=27455526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:24,0 chr2 27455527 . T . PASS END=27455527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:20,0 chr2 27455528 . G . PASS END=27455529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 27455530 . T . PASS END=27455557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr2 27455558 . G . PASS END=27455558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 27455559 . A . PASS END=27455559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 27455560 . A . PASS END=27455562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 27455910 . A . PASS END=27455910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1264:0,60,255:37,0 chr2 27455911 . T . PASS END=27455913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1517:0,118,255:40,0 chr2 27455914 . G . PASS END=27455914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,7:48:6:48:0,6,1347:0,6,255:39,0 chr2 27455915 . A . PASS END=27455921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:83:49:0,83,1584:0,83,255:40,0 chr2 27455922 . A . PASS END=27455922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1522:0,75,255:40,0 chr2 27455923 . C . PASS END=27455927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,114,1563:0,114,255:40,0 chr2 27455928 . A . PASS END=27455928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:48:51:0,48,1543:0,48,255:40,0 chr2 27455929 . T . PASS END=27455938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:51:0,88,1643:0,88,255:40,0 chr2 27455939 . T . PASS END=27455939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,7:57:55:57:0,55,1665:0,55,255:40,0 chr2 27455940 . A . PASS END=27456008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:52:0,80,1691:0,80,255:40,0 chr2 27456180 . G . PASS END=27456194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1119:0,82,255:33,0 chr2 27456195 . T . PASS END=27456195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 27456196 . A . PASS END=27456206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 27456207 . A . PASS END=27456207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 27456208 . A . PASS END=27456254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1133:0,82,255:38,0 chr2 27456255 . A . PASS END=27456256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1234:0,62,255:35,0 chr2 27456257 . G . PASS END=27456262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:85:41:0,85,1474:0,85,255:40,0 chr2 27456263 . G . PASS END=27456263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:38,0 chr2 27456264 . G . PASS END=27456279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:42:0,87,1460:0,87,255:40,0 chr2 27456280 . A . PASS END=27456280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1451:0,74,255:37,0 chr2 27456281 . G . PASS END=27456389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1215:0,86,255:40,0 chr2 27456390 . C . PASS END=27456390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 27456391 . T . PASS END=27456396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1177:0,80,255:29,0 chr2 27456397 . A . PASS END=27456397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,983:0,76,255:27,0 chr2 27456398 . C . PASS END=27456404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:29,0 chr2 27456494 . T . PASS END=27456522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1162:0,83,255:36,0 chr2 27456523 . G . PASS END=27456523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr2 27456524 . T . PASS END=27456664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1100:0,87,255:39,0 chr2 27456665 . C . PASS END=27456676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,70,255:24,0 chr2 27456876 . G . PASS END=27456982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1039:0,84,255:40,0 chr2 27456983 . C . PASS END=27456983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1475:0,60,255:35,0 chr2 27456984 . C . PASS END=27457093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:34:0,82,1127:0,82,255:40,0 chr2 27457094 . G . PASS END=27457094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:30,0 chr2 27457386 . G . PASS END=27457548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:37:0,84,1260:0,94,255:40,0 chr2 27457549 . T . PASS END=27457549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 27457550 . A . PASS END=27457551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,94,255:26,0 chr2 27457552 . A . PASS END=27457553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,107,255:26,0 chr2 27458113 . G . PASS END=27458118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,517:0,40,255:19,0 chr2 27458119 . C . PASS END=27458119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 27458120 . A . PASS END=27458120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 27458121 . G . PASS END=27458125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:23,0 chr2 27458126 . C . PASS END=27458126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 27458127 . C . PASS END=27458128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr2 27458129 . T . PASS END=27458129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr2 27458130 . C . PASS END=27458136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr2 27458137 . T . PASS END=27458137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr2 27458138 . T . PASS END=27458138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 27458139 . G . PASS END=27458236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1023:0,81,255:39,0 chr2 27458237 . T . PASS END=27458240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr2 27458241 . C . PASS END=27458253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:34,0 chr2 27458254 . A . PASS END=27458254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1040:0,66,255:29,0 chr2 27458255 . T . PASS END=27458283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:31,0 chr2 27458284 . G . PASS END=27458284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27458285 . G . PASS END=27458285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27458286 . C . PASS END=27458295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:25,0 chr2 27458404 . A . PASS END=27458508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,99,1405:0,100,255:40,0 chr2 27459152 . G . PASS END=27459152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 27459153 . T . PASS END=27459155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27459156 . C . PASS END=27459163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,670:0,48,255:19,0 chr2 27459164 . G . PASS END=27459166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27459167 . T . PASS END=27459167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 27459168 . G . PASS END=27459169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 27459170 . C . PASS END=27459170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 27459171 . A . PASS END=27459171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 27459172 . C . PASS END=27459172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 27459173 . T . PASS END=27459174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:27:20:0,27,635:0,27,255:17,0 chr2 27459175 . T . PASS END=27459178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:18,0 chr2 27459179 . G . PASS END=27459179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:17,0 chr2 27459180 . A . PASS END=27459181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:18,0 chr2 27459182 . G . PASS END=27459182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr2 27459183 . C . PASS END=27459183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 27459184 . T . PASS END=27459186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:22:0,41,751:0,41,255:23,0 chr2 27459187 . G . PASS END=27459188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:23,0 chr2 27459189 . A . PASS END=27459189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 27459190 . T . PASS END=27459190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr2 27459191 . G . PASS END=27459195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 27459196 . G . PASS END=27459202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:26,0 chr2 27459203 . C . PASS END=27459203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 27459204 . C . PASS END=27459204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 27459205 . A . PASS END=27459205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 27459206 . C . PASS END=27459206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 27459207 . A . PASS END=27459214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1036:0,87,255:30,0 chr2 27459215 . A . PASS END=27459215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr2 27459216 . T . PASS END=27459227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1149:0,80,255:32,0 chr2 27459228 . T . PASS END=27459228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:28,0 chr2 27459229 . A . PASS END=27459243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1109:0,83,255:31,0 chr2 27459244 . T . PASS END=27459244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 27459245 . G . PASS END=27459248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 27459249 . T . PASS END=27459249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 27459250 . G . PASS END=27459288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1150:0,85,255:34,0 chr2 27459289 . T . PASS END=27459289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,865:0,35,255:28,0 chr2 27459290 . C . PASS END=27459317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1148:0,83,255:32,0 chr2 27459318 . G . PASS END=27459318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 27459319 . C . PASS END=27459324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 27459325 . A . PASS END=27459327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 27459328 . C . PASS END=27459334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1169:0,80,255:29,0 chr2 27459335 . G . PASS END=27459338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 27459339 . A . PASS END=27459339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,945:0,40,255:22,0 chr2 27459340 . C . PASS END=27459345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:24,0 chr2 27459346 . C . PASS END=27459346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,992:0,53,255:21,0 chr2 27459347 . G . PASS END=27459348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 27459349 . G . PASS END=27459350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:25:0,44,855:0,44,255:19,0 chr2 27459351 . C . PASS END=27459351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27459352 . C . PASS END=27459354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr2 27459355 . A . PASS END=27459355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:17,0 chr2 27459356 . A . PASS END=27459358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 27459359 . A . PASS END=27459359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:17,0 chr2 27459360 . T . PASS END=27459366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:18,0 chr2 27459367 . C . PASS END=27459367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr2 27459368 . A . PASS END=27459382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr2 27459383 . T . PASS END=27459383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,501:0,26,255:17,0 chr2 27459384 . T . PASS END=27459391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:18,0 chr2 27459596 . C . PASS END=27459596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 27459597 . T . PASS END=27459598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 27459599 . A . PASS END=27459698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1224:0,83,255:40,0 chr2 27460247 . G . PASS END=27460253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 27460254 . T . PASS END=27460254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 27460255 . G . PASS END=27460255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 27460256 . A . PASS END=27460256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr2 27460257 . T . PASS END=27460257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 27460258 . G . PASS END=27460269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,560:0,40,255:19,0 chr2 27460270 . C . PASS END=27460270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr2 27460271 . T . PASS END=27460273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr2 27460274 . G . PASS END=27460290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,690:0,57,255:19,0 chr2 27460291 . C . PASS END=27460291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27460292 . A . PASS END=27460292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 27460293 . T . PASS END=27460307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,667:0,60,255:20,0 chr2 27460308 . T . PASS END=27460328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr2 27460329 . G . PASS END=27460339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,762:0,66,255:22,0 chr2 27460340 . T . PASS END=27460346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,49,255:19,0 chr2 27460347 . G . PASS END=27460347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,743:0,27,255:16,0 chr2 27460348 . G . PASS END=27460377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,675:0,44,255:18,0 chr2 27460378 . A . PASS END=27460378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 27460379 . T . PASS END=27460381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 27460382 . T . PASS END=27460382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,497:0,34,255:15,0 chr2 27460383 . T . PASS END=27460385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 27460386 . C . PASS END=27460386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 27460387 . G . PASS END=27460396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27460397 . T . PASS END=27460402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 27460403 . T . PASS END=27460403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 27460404 . G . PASS END=27460408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27460409 . A . PASS END=27460409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr2 27460410 . G . PASS END=27460411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27460412 . A . PASS END=27460412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr2 27460413 . G . PASS END=27460413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27460586 . C . PASS END=27460612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1161:0,80,255:36,0 chr2 27460613 . T . PASS END=27460614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1164:0,69,255:34,0 chr2 27460615 . T . PASS END=27460701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1256:0,92,255:37,0 chr2 27460702 . T . PASS END=27460702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:29,0 chr2 27460703 . G . PASS END=27460705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 27460706 . A . PASS END=27460731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr2 27460732 . C . PASS END=27460732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 27460733 . G . PASS END=27460733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27460734 . T . PASS END=27460734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:19,0 chr2 27460735 . G . PASS END=27460736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27460737 . T . PASS END=27460737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 27460738 . C . PASS END=27460739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27460740 . A . PASS END=27460745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 27460746 . T . PASS END=27460750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:20:0,33,495:0,60,255:13,0 chr2 27460924 . C . PASS END=27460930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1048:0,84,255:29,0 chr2 27460931 . A . PASS END=27460940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1103:0,87,255:31,0 chr2 27460941 . C . PASS END=27460944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1164:0,60,255:32,0 chr2 27460945 . C . PASS END=27460967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:34:0,92,1310:0,92,255:40,0 chr2 27460968 . A G, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.369;ReadPosRankSum=4.282;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,22,0:0.550,0.000:40:7,14,0:11,8,0:48:85,0,49,750,644,1394:255,0,255:18,0:5.0000e+01,6.9375e-05,5.2216e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,12,10:6,12,12,10 chr2 27460969 . G . PASS END=27461005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,117,1755:0,122,255:40,0 chr2 27461006 . A . PASS END=27461042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:32:0,84,1260:0,90,255:40,0 chr2 27461043 . A . PASS END=27461043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr2 27461044 . C . PASS END=27461050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr2 27461051 . A . PASS END=27461051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 27461052 . G . PASS END=27461052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27461053 . G . PASS END=27461053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27461054 . A . PASS END=27461055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 27461299 . A . PASS END=27461321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 27461322 . G . PASS END=27461336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr2 27461337 . A . PASS END=27461337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 27461338 . G . PASS END=27461345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 27461346 . C . PASS END=27461346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 27461347 . G . PASS END=27461354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr2 27461355 . T . PASS END=27461355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 27461356 . C . PASS END=27461373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 27461374 . A . PASS END=27461374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr2 27461375 . G . PASS END=27461389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr2 27461390 . A . PASS END=27461392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,35,255:13,0 chr2 27461393 . G . PASS END=27461393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:10,0 chr2 27461394 . C . PASS END=27461398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 27461399 . G . PASS END=27461403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:14,0 chr2 27461404 . G . PASS END=27461404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 27461405 . G . PASS END=27461407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr2 27461408 . A . PASS END=27461420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 27461421 . G . PASS END=27461421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27461422 . C . PASS END=27461422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 27461423 . C . PASS END=27461428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27461429 . T . PASS END=27461429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27461430 . T . PASS END=27461430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 27461431 . G . PASS END=27461433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27461434 . T . PASS END=27461434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 27461435 . C . PASS END=27461437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27461438 . G . PASS END=27461441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 27461442 . G . PASS END=27461442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 27461443 . G . PASS END=27461456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:17,0 chr2 27461457 . G . PASS END=27461457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 27461458 . T . PASS END=27461460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 27461461 . G . PASS END=27461461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 27461462 . A . PASS END=27461462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,512:0,4,255:11,0 chr2 27461463 . G . PASS END=27461468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,540:0,34,255:13,0 chr2 27461469 . G . PASS END=27461469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:11,0 chr2 27461470 . G . PASS END=27461485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:32:12:0,32,403:0,32,255:12,0 chr2 27461486 . T . PASS END=27461486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 27461487 . T . PASS END=27461500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr2 27461910 . C . PASS END=27461911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 27461912 . C . PASS END=27461935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,995:0,84,255:32,0 chr2 27461936 . G . PASS END=27461936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:29,0 chr2 27461937 . G . PASS END=27462038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:32:0,89,1395:0,89,255:40,0 chr2 27462039 . G . PASS END=27462042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 27462043 . G . PASS END=27462043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:37,0 chr2 27462044 . C . PASS END=27462075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,100,1305:0,100,255:39,0 chr2 27462076 . C T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=2.744;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:9,9,0:10,10,0:48:85,0,50,606,680,1285:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,11,9,10:10,9,9,10 chr2 27462077 . C . PASS END=27462100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1305:0,93,255:34,0 chr2 27462199 . G . PASS END=27462339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1800:0,139,255:40,0 chr2 27462341 . T . PASS END=27462341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,127,255:40,0 chr2 27462565 . G . PASS END=27462574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:25,0 chr2 27462575 . C . PASS END=27462575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:22,0 chr2 27462576 . C . PASS END=27462583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:23,0 chr2 27462584 . A . PASS END=27462584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 27462585 . T . PASS END=27462588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 27462589 . C . PASS END=27462589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 27462590 . A . PASS END=27462595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 27462596 . T . PASS END=27462596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 27462597 . A . PASS END=27462599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 27462600 . G . PASS END=27462600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 27462601 . A . PASS END=27462608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 27462609 . A . PASS END=27462609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr2 27462610 . C . PASS END=27462649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr2 27462650 . C . PASS END=27462666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 27463133 . A . PASS END=27463143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,915:0,78,255:26,0 chr2 27463144 . A . PASS END=27463146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr2 27463147 . C . PASS END=27463150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 27463151 . C . PASS END=27463151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 27463152 . G . PASS END=27463154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27463155 . G . PASS END=27463155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 27463156 . C . PASS END=27463161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1005:0,87,255:29,0 chr2 27463162 . A . PASS END=27463162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 27463163 . G . PASS END=27463177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1013:0,83,255:31,0 chr2 27463178 . C . PASS END=27463186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 27463187 . C . PASS END=27463187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:50:33:0,50,1098:0,50,255:26,0 chr2 27463188 . T . PASS END=27463189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 27463190 . C . PASS END=27463228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,854:0,62,255:25,0 chr2 27463229 . G . PASS END=27463229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 27463435 . C . PASS END=27463443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:26,0 chr2 27463444 . T . PASS END=27463444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 27463445 . C . PASS END=27463485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,925:0,64,255:26,0 chr2 27463779 . C . PASS END=27463823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,149,255:40,0 chr2 27463926 . A . PASS END=27464095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1244:0,81,255:40,0 chr2 27464190 . A . PASS END=27464190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1211:0,69,255:33,0 chr2 27464191 . T . PASS END=27464249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:38:0,90,1303:0,90,255:40,0 chr2 27464250 . C . PASS END=27464250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:36,0 chr2 27464251 . T . PASS END=27464264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:37,0 chr2 27464779 . G . PASS END=27464788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:23,0 chr2 27464789 . T . PASS END=27464789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 27464790 . G . PASS END=27464795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27464796 . C . PASS END=27464796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 27464797 . A . PASS END=27464812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,845:0,66,255:26,0 chr2 27464813 . G . PASS END=27464813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr2 27464814 . C . PASS END=27464814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 27464815 . A . PASS END=27464816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 27464817 . A . PASS END=27464817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 27464818 . C . PASS END=27464819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 27464820 . G . PASS END=27464823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27464824 . A . PASS END=27464837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 27464838 . A . PASS END=27464845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 27464846 . T . PASS END=27464848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27464849 . C . PASS END=27464849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 27464850 . C . PASS END=27464851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 27464852 . G . PASS END=27464852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27464853 . G . PASS END=27464858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27464859 . A . PASS END=27464859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 27464860 . G . PASS END=27464875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 27464876 . T . PASS END=27464876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,841:0,34,255:25,0 chr2 27464877 . C . PASS END=27464886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 27464887 . A . PASS END=27464924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,886:0,67,255:26,0 chr2 27464925 . C . PASS END=27464925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 27464926 . G . PASS END=27464940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 27464941 . T . PASS END=27464943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27464944 . T . PASS END=27464945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27464946 . T . PASS END=27464951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27464952 . C . PASS END=27464956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27464957 . T . PASS END=27464957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 27464958 . C . PASS END=27464966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 27464967 . G . PASS END=27464969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27464970 . C . PASS END=27464971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27464972 . C . PASS END=27464991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,675:0,44,255:19,0 chr2 27465170 . C . PASS END=27465175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 27465176 . G . PASS END=27465179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 27465180 . A . PASS END=27465180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 27465181 . G . PASS END=27465182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 27465183 . A . PASS END=27465183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27465184 . C . PASS END=27465210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,621:0,45,255:19,0 chr2 27465211 . G . PASS END=27465225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:26,0 chr2 27465226 . G . PASS END=27465245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:30,0 chr2 27465246 . T . PASS END=27465246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr2 27465247 . G . PASS END=27465248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27465249 . A . PASS END=27465249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 27465250 . C . PASS END=27465264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 27465265 . T . PASS END=27465286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr2 27465287 . G . PASS END=27465287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:21,0 chr2 27465288 . G . PASS END=27465295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27465488 . A . PASS END=27465751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:37:0,97,1273:0,97,255:40,0 chr2 27465752 . A . PASS END=27465752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:34,0 chr2 27465753 . G . PASS END=27465841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,89,255:40,0 chr2 27466066 . T . PASS END=27466150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:35:0,83,1440:0,83,255:40,0 chr2 27466151 . A . PASS END=27466151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1353:0,76,255:40,0 chr2 27466152 . C . PASS END=27466152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1520:0,55,255:33,0 chr2 27466153 . G . PASS END=27466160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:44:0,94,1596:0,94,255:38,0 chr2 27466284 . C . PASS END=27466285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:95:37:0,95,1295:0,95,255:37,0 chr2 27466286 . T . PASS END=27466287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:70:39:0,70,1304:0,70,255:37,0 chr2 27466288 . G . PASS END=27466289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:41:0,90,1396:0,90,255:39,0 chr2 27466290 . A . PASS END=27466290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1323:0,67,255:39,0 chr2 27466291 . G . PASS END=27466293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1402:0,90,255:39,0 chr2 27466294 . G . PASS END=27466294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:38,0 chr2 27466295 . A . PASS END=27466296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1302:0,106,255:36,0 chr2 27466297 . T . PASS END=27466298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1299:0,68,255:36,0 chr2 27466299 . G . PASS END=27466299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1443:0,107,255:36,0 chr2 27466300 . G . PASS END=27466301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1374:0,68,255:36,0 chr2 27466302 . T . PASS END=27466302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:46:43:0,46,1316:0,46,255:36,0 chr2 27466303 . C . PASS END=27466310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:43:0,96,1474:0,96,255:40,0 chr2 27466311 . A . PASS END=27466311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 27466312 . G . PASS END=27466312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:12:43:0,12,1365:0,12,255:36,0 chr2 27466313 . C . PASS END=27466314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1499:0,112,255:39,0 chr2 27466315 . T . PASS END=27466315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:41:43:0,41,1385:0,41,255:36,0 chr2 27466316 . A . PASS END=27466321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:44:0,96,1590:0,96,255:40,0 chr2 27466322 . G . PASS END=27466322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:38,0 chr2 27466323 . C . PASS END=27466326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:98:43:0,98,1523:0,98,255:40,0 chr2 27466327 . G . PASS END=27466327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1441:0,57,255:37,0 chr2 27466328 . C . PASS END=27466345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1260:0,82,255:39,0 chr2 27466346 . T . PASS END=27466346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1357:0,73,255:28,0 chr2 27466347 . C . PASS END=27466348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1305:0,111,255:29,0 chr2 27466349 . G . PASS END=27466349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:38:36:0,38,1143:0,38,255:28,0 chr2 27466350 . C . PASS END=27466350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:29,0 chr2 27466351 . A . PASS END=27466351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 27466352 . T . PASS END=27466352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:27,0 chr2 27466353 . G . PASS END=27466354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,82,255:27,0 chr2 27466355 . C . PASS END=27466355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:27,0 chr2 27466356 . T . PASS END=27466357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1008:0,38,255:23,0 chr2 27466358 . T . PASS END=27466358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 27466359 . G . PASS END=27466359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:23,0 chr2 27466360 . T . PASS END=27466360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 27466361 . T . PASS END=27466361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1038:0,43,255:22,0 chr2 27466362 . A . PASS END=27466362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:30:0,66,990:0,74,255:22,0 chr2 27466363 . G . PASS END=27466363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:22,0 chr2 27466364 . C . PASS END=27466365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,71,255:23,0 chr2 27466366 . A . PASS END=27466378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:19:0,44,810:0,44,255:18,0 chr2 27466379 . G . PASS END=27466379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr2 27466380 . T . PASS END=27466386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 27477954 . C . PASS END=27477996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 27477997 . C . PASS END=27478002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,305:0,30,255:10,0 chr2 27478003 . G . PASS END=27478003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 27478004 . G . PASS END=27478031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,382:0,33,255:13,0 chr2 27478032 . C . PASS END=27478045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 27478046 . A . PASS END=27478061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 27478062 . A . PASS END=27478062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 27478063 . G . PASS END=27478071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 27478072 . G . PASS END=27478072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 27478073 . A . PASS END=27478074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 27478075 . G . PASS END=27478076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr2 27478077 . G . PASS END=27478077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr2 27478078 . G . PASS END=27478078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr2 27478079 . T . PASS END=27478079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,437:0,14,255:14,0 chr2 27478080 . A . PASS END=27478081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27478082 . G . PASS END=27478082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 27478083 . G . PASS END=27478111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 27478112 . G . PASS END=27478143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr2 27478144 . C . PASS END=27478144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 27478145 . T . PASS END=27478153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,837:0,66,255:23,0 chr2 27478154 . C . PASS END=27478154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 27478155 . A . PASS END=27478157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 27478158 . G . PASS END=27478159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27478160 . G . PASS END=27478162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 27478163 . G . PASS END=27478304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,521:0,48,255:19,0 chr2 27478305 . C . PASS END=27478322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 27478323 . T . PASS END=27478328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 27479254 . C . PASS END=27479254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 27479255 . G . PASS END=27479262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr2 27479263 . G . PASS END=27479263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 27479264 . G . PASS END=27479275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 27479276 . A . PASS END=27479276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr2 27479277 . A . PASS END=27479278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr2 27479279 . A . PASS END=27479279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 27479280 . T . PASS END=27479281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,690:0,44,255:20,0 chr2 27479282 . G . PASS END=27479321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:22,0 chr2 27479322 . G . PASS END=27479322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 27479323 . C . PASS END=27479324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27479325 . C . PASS END=27479325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 27479326 . G . PASS END=27479332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 27479333 . T . PASS END=27479333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 27479334 . G . PASS END=27479342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27479343 . A . PASS END=27479359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:17:0,42,630:0,44,255:19,0 chr2 27479360 . A . PASS END=27479360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 27479361 . G . PASS END=27479365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27479366 . G . PASS END=27479379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,32,255:12,0 chr2 27479380 . G . PASS END=27479380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 27479381 . G . PASS END=27479381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 27479382 . G . PASS END=27479382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:10,0 chr2 27479383 . G . PASS END=27479388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr2 27479656 . C . PASS END=27479656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr2 27479657 . T . PASS END=27479657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1241:0,99,255:33,0 chr2 27479658 . T . PASS END=27479659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 27479660 . C . PASS END=27479660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1296:0,105,255:35,0 chr2 27479661 . A . PASS END=27479661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:34,0 chr2 27479662 . T . PASS END=27479662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1252:0,105,255:35,0 chr2 27479663 . G . PASS END=27479663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:34,0 chr2 27479664 . A . PASS END=27479664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:34,0 chr2 27479665 . G . PASS END=27479667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1256:0,69,255:36,0 chr2 27479668 . T . PASS END=27479669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1352:0,111,255:37,0 chr2 27479670 . C . PASS END=27479670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:36,0 chr2 27479671 . G . PASS END=27479761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:36:0,85,1346:0,85,255:40,0 chr2 27480022 . C . PASS END=27480036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr2 27480037 . G . PASS END=27480037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 27480038 . A . PASS END=27480040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 27480041 . G . PASS END=27480041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 27480042 . A . PASS END=27480042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 27480043 . G . PASS END=27480043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr2 27480044 . G . PASS END=27480044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 27480045 . C . PASS END=27480074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 27480075 . C . PASS END=27480092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:16,0 chr2 27480093 . A . PASS END=27480093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 27480094 . T . PASS END=27480100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 27480101 . C . PASS END=27480103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27480104 . A . PASS END=27480130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 27480131 . T . PASS END=27480131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27480132 . C . PASS END=27480158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 27480159 . A . PASS END=27480159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr2 27480160 . C . PASS END=27480184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,620:0,48,255:18,0 chr2 27480185 . T . PASS END=27480187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,616:0,15,255:18,1 chr2 27480188 . G . PASS END=27480215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,470:0,45,255:18,0 chr2 27480216 . C . PASS END=27480220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27480773 . A . PASS END=27480789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:25,0 chr2 27480790 . T . PASS END=27480790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 27480791 . G . PASS END=27480830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,900:0,69,255:26,0 chr2 27480831 . G . PASS END=27480835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 27480836 . T . PASS END=27480839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:26:0,71,1061:0,71,255:26,0 chr2 27480840 . T . PASS END=27480843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 27480844 . C . PASS END=27480844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr2 27480845 . A . PASS END=27480848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 27480849 . G . PASS END=27480850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr2 27480851 . C . PASS END=27480851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27480852 . G . PASS END=27480855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr2 27480856 . G . PASS END=27480856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,969:0,10,255:26,0 chr2 27480857 . A . PASS END=27480857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27480858 . A . PASS END=27480861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr2 27480862 . C . PASS END=27480863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:23,0 chr2 27480864 . G . PASS END=27480866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:52:30:0,52,1078:0,52,255:25,0 chr2 27480867 . A . PASS END=27480869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:24,0 chr2 27480870 . G . PASS END=27480870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:23,0 chr2 27480871 . G . PASS END=27480871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 27480872 . A . PASS END=27480872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,953:0,29,255:22,0 chr2 27480873 . G . PASS END=27480873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr2 27480874 . G . PASS END=27480874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:22,0 chr2 27480875 . A . PASS END=27480875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 27480876 . T . PASS END=27480877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr2 27480878 . C . PASS END=27480878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 27480879 . C . PASS END=27480881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr2 27480882 . T . PASS END=27480882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 27480883 . G . PASS END=27480884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr2 27480885 . C . PASS END=27480888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 27480889 . C . PASS END=27480889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr2 27480890 . C . PASS END=27480890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:21,0 chr2 27480891 . A . PASS END=27480893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,792:0,33,255:21,0 chr2 27480894 . G . PASS END=27480894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 27480895 . G . PASS END=27480899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:20,0 chr2 27480900 . C . PASS END=27480900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 27480901 . C . PASS END=27480901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,821:0,33,255:20,0 chr2 27480902 . A . PASS END=27480911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27480912 . A . PASS END=27480926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,637:0,40,255:18,0 chr2 27481029 . C . PASS END=27481198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:96:33:0,96,1440:0,99,255:40,0 chr2 27481621 . C . PASS END=27481623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27481624 . C . PASS END=27481624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 27481625 . C . PASS END=27481634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 27481635 . G . PASS END=27481635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 27481636 . C . PASS END=27481639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:23,0 chr2 27481640 . G . PASS END=27481640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 27481641 . A . PASS END=27481654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,769:0,69,255:24,0 chr2 27481655 . G . PASS END=27481656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 27481657 . C . PASS END=27481657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 27481658 . A . PASS END=27481658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 27481659 . C . PASS END=27481672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,939:0,75,255:26,0 chr2 27481673 . C . PASS END=27481691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:30,0 chr2 27481692 . C . PASS END=27481701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 27481702 . T . PASS END=27481702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr2 27481703 . A . PASS END=27481734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:26,0 chr2 27481735 . A . PASS END=27481735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 27481736 . G . PASS END=27481746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,864:0,61,255:24,0 chr2 27481747 . G . PASS END=27481747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 27481748 . C . PASS END=27481754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr2 27481755 . A . PASS END=27481755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr2 27481756 . C . PASS END=27481756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 27481757 . A . PASS END=27481757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:18,0 chr2 27481758 . G . PASS END=27481765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 27481766 . C . PASS END=27481797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,492:0,45,255:17,0 chr2 27481798 . A . PASS END=27481802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27485680 . C . PASS END=27485680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr2 27485681 . T . PASS END=27485682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,443:0,25,255:14,0 chr2 27485683 . T . PASS END=27485716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,432:0,41,255:19,0 chr2 27485717 . C . PASS END=27485723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr2 27485724 . G . PASS END=27485724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 27485725 . C . PASS END=27485725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27485726 . T . PASS END=27485726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 27485727 . C . PASS END=27485735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 27485736 . A . PASS END=27485737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr2 27485738 . T . PASS END=27485740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 27485741 . T . PASS END=27485741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr2 27485742 . C . PASS END=27485751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr2 27485752 . C . PASS END=27485753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 27485754 . A . PASS END=27485761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr2 27485762 . G . PASS END=27485762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 27485763 . A . PASS END=27485764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 27485765 . A . PASS END=27485765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,654:0,49,255:21,0 chr2 27485766 . G . PASS END=27485770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 27485771 . C . PASS END=27485774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:19,0 chr2 27486214 . C . PASS END=27486242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,102,1530:0,134,255:40,0 chr2 27486878 . A . PASS END=27486941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:43:0,83,1162:0,83,255:40,0 chr2 27486942 . C . PASS END=27486942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1268:0,54,255:36,0 chr2 27486943 . T . PASS END=27486943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1296:0,109,255:38,0 chr2 27486944 . G . PASS END=27486944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1372:0,57,255:37,0 chr2 27486945 . C . PASS END=27486950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:42:0,95,1270:0,95,255:39,0 chr2 27498045 . C . PASS END=27498100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,101,1280:0,101,255:40,0 chr2 27499597 . A . PASS END=27499706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1251:0,81,255:40,0 chr2 27499707 . C . PASS END=27499707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:33,0 chr2 27499708 . A . PASS END=27499709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:33,0 chr2 27500622 . C . PASS END=27500644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,537:0,45,255:19,0 chr2 27500645 . C . PASS END=27500649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr2 27500650 . T . PASS END=27500650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:21,0 chr2 27500651 . T . PASS END=27500661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:23,0 chr2 27500662 . C . PASS END=27500662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 27500663 . T . PASS END=27500679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,970:0,69,255:26,0 chr2 27500680 . T . PASS END=27500702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1074:0,84,255:31,0 chr2 27500703 . T . PASS END=27500703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 27500704 . C . PASS END=27500734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1233:0,86,255:30,0 chr2 27500735 . A . PASS END=27500735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr2 27500736 . A . PASS END=27500739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 27500740 . A . PASS END=27500752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr2 27500753 . A . PASS END=27500760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,83,255:29,0 chr2 27500761 . C . PASS END=27500761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr2 27500762 . T . PASS END=27500771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 27500772 . T . PASS END=27500772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 27500773 . A . PASS END=27500783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27500784 . A . PASS END=27500796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,1000:0,70,255:26,0 chr2 27500797 . C . PASS END=27500797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 27500798 . A . PASS END=27500801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 27500802 . C . PASS END=27500802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr2 27500803 . T . PASS END=27500831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,872:0,64,255:26,0 chr2 27500832 . T . PASS END=27500834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27500835 . T . PASS END=27500840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27500841 . A . PASS END=27500841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 27500842 . G . PASS END=27500844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,786:0,63,255:22,0 chr2 27500845 . G . PASS END=27500845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 27500846 . T . PASS END=27500850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr2 27500851 . T . PASS END=27500851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 27500852 . A . PASS END=27500853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27500854 . T . PASS END=27500854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr2 27500855 . A . PASS END=27500856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27500857 . T . PASS END=27500857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27500858 . T . PASS END=27500858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27500859 . T . PASS END=27500859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:19,0 chr2 27500860 . A . PASS END=27500861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27500862 . T . PASS END=27500862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr2 27500863 . C . PASS END=27500870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 27500871 . T . PASS END=27500871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 27500872 . T . PASS END=27500874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr2 27500875 . T . PASS END=27500875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 27500876 . G . PASS END=27500876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:22,0 chr2 27500877 . G . PASS END=27500879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:21,0 chr2 27500880 . C . PASS END=27500881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 27500882 . A . PASS END=27500883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 27501056 . A . PASS END=27501057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 27501058 . A . PASS END=27501196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:28:0,80,1161:0,80,255:40,0 chr2 27501197 . T . PASS END=27501200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 27503034 . G . PASS END=27503090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:85:0,120,1800:0,159,255:40,0 chr2 27505600 . A . PASS END=27505603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 27505604 . A . PASS END=27505612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:32,0 chr2 27505613 . T . PASS END=27505613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,1 chr2 27505614 . G . PASS END=27505744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:33:0,82,1127:0,82,255:40,0 chr2 27505745 . A . PASS END=27505767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,112,1468:0,112,255:40,0 chr2 27521435 . G . PASS END=27521437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27521438 . T . PASS END=27521438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 27521439 . C . PASS END=27521441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27521442 . A . PASS END=27521444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 27521445 . C . PASS END=27521445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27521446 . T . PASS END=27521446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,674:0,29,255:19,0 chr2 27521447 . C . PASS END=27521452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 27521453 . C . PASS END=27521453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 27521454 . A . PASS END=27521454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 27521455 . G . PASS END=27521455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 27521456 . T . PASS END=27521458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 27521459 . C . PASS END=27521459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 27521460 . G . PASS END=27521462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 27521463 . G . PASS END=27521463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 27521464 . C . PASS END=27521465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 27521466 . C . PASS END=27521466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 27521467 . C . PASS END=27521470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 27521471 . A . PASS END=27521471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 27521472 . C . PASS END=27521472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 27521473 . T . PASS END=27521473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 27521474 . G . PASS END=27521476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 27521477 . T . PASS END=27521477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,840:0,47,255:24,0 chr2 27521478 . C . PASS END=27521485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:25,0 chr2 27521486 . G . PASS END=27521486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 27521487 . G . PASS END=27521490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:26,0 chr2 27521491 . T . PASS END=27521558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,992:0,80,255:31,0 chr2 27521559 . A . PASS END=27521572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,917:0,67,255:26,0 chr2 27521573 . A . PASS END=27521573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:23,0 chr2 27521574 . A . PASS END=27521577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1000:0,78,255:26,0 chr2 27521578 . T . PASS END=27521578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,819:0,47,255:25,0 chr2 27521579 . A . PASS END=27521607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 27522113 . G . PASS END=27522284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:31:0,87,1241:0,93,255:40,0 chr2 27522398 . A . PASS END=27522493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:62:0,120,1800:0,153,255:40,0 chr2 27522494 . T . PASS END=27522523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,191,255:40,0 chr2 27527827 . A . PASS END=27527922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:37:0,90,1299:0,90,255:40,0 chr2 27528452 . G . PASS END=27528460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr2 27528461 . C . PASS END=27528461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 27528462 . G . PASS END=27528475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 27528476 . T . PASS END=27528483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 27528484 . C . PASS END=27528486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27528487 . G . PASS END=27528487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 27528488 . A . PASS END=27528498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 27528499 . C . PASS END=27528506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 27528507 . C . PASS END=27528508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27528509 . G . PASS END=27528524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,662:0,54,255:19,0 chr2 27528525 . A . PASS END=27528526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 27528527 . G . PASS END=27528535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27528536 . C . PASS END=27528646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,784:0,61,255:26,0 chr2 27528647 . C . PASS END=27528654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 27528655 . G . PASS END=27528658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 27528659 . G . PASS END=27528673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr2 27528674 . C . PASS END=27528677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:13,0 chr2 27528678 . A . PASS END=27528684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:14:0,27,405:0,42,255:9,0 chr2 27528685 . G . PASS END=27528685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:15:14:0,15,225:0,25,255:5,0 chr2 27528948 . C . PASS END=27528959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,884:0,72,255:25,0 chr2 27528960 . C . PASS END=27528960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr2 27528961 . T . PASS END=27528970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:26,0 chr2 27529081 . G . PASS END=27529085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 27529086 . G . PASS END=27529086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 27529087 . G . PASS END=27529106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr2 27529107 . T . PASS END=27529107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 27529108 . G . PASS END=27529125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:23,0 chr2 27529126 . A . PASS END=27529126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr2 27529127 . G . PASS END=27529137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,662:0,60,255:20,0 chr2 27529138 . C . PASS END=27529148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 27529149 . T . PASS END=27529150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27529151 . A . PASS END=27529151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 27529152 . C . PASS END=27529152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27529153 . C . PASS END=27529153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 27529154 . G . PASS END=27529170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 27529171 . G . PASS END=27529180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 27529181 . C . PASS END=27529181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27529182 . T . PASS END=27529186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27529187 . A . PASS END=27529192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 27529193 . G . PASS END=27529205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,751:0,47,255:19,0 chr2 27529323 . G . PASS END=27529326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 27529327 . C . PASS END=27529327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 27529328 . T . PASS END=27529338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr2 27529339 . A . PASS END=27529339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 27529340 . A . PASS END=27529352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:24,0 chr2 27529353 . C . PASS END=27529354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr2 27529355 . A . PASS END=27529358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 27529359 . G . PASS END=27529359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 27529360 . G . PASS END=27529388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:25,0 chr2 27529389 . G . PASS END=27529389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 27529390 . A . PASS END=27529391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 27529392 . C . PASS END=27529393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:23,0 chr2 27529394 . G . PASS END=27529409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,848:0,72,255:24,0 chr2 27530389 . T . PASS END=27530391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27530392 . C . PASS END=27530411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:15,0 chr2 27530412 . T . PASS END=27530412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:14,0 chr2 27530413 . G . PASS END=27530414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr2 27530415 . T . PASS END=27530415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 27530416 . G . PASS END=27530420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,621:0,44,255:19,0 chr2 27530421 . T . PASS END=27530422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr2 27530423 . T . PASS END=27530423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 27530424 . G . PASS END=27530426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 27530427 . C . PASS END=27530427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 27530428 . G . PASS END=27530431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27530432 . C . PASS END=27530450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,720:0,47,255:19,0 chr2 27530451 . T . PASS END=27530451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,607:0,26,255:16,0 chr2 27530452 . C . PASS END=27530460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 27530461 . C . PASS END=27530468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 27530469 . G . PASS END=27530479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:18,0 chr2 27530480 . A . PASS END=27530480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:16,0 chr2 27530481 . G . PASS END=27530487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 27530488 . G . PASS END=27530489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 27530490 . T . PASS END=27530529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 27530530 . C . PASS END=27530537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27530538 . C . PASS END=27530552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,712:0,44,255:19,0 chr2 27530553 . A . PASS END=27530553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 27530554 . T . PASS END=27530595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 27530596 . C . PASS END=27530596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 27530597 . A . PASS END=27530618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:19,0 chr2 27530619 . C . PASS END=27530619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr2 27530620 . A . PASS END=27530620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:16,0 chr2 27530621 . C . PASS END=27530642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,698:0,46,255:19,0 chr2 27530643 . T . PASS END=27530643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr2 27530644 . C . PASS END=27530644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 27530645 . C . PASS END=27530705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,637:0,43,255:19,0 chr2 27530706 . A . PASS END=27530706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:13,0 chr2 27530707 . C . PASS END=27530763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,380:0,31,255:13,0 chr2 27532367 . T . PASS END=27532367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1013:0,76,255:30,0 chr2 27532413 . C . PASS END=27532414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1587:0,99,255:40,0 chr2 27532420 . C . PASS END=27532420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 27532429 . G . PASS END=27532429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 27532433 . G . PASS END=27532433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 27532586 . C . PASS END=27532586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 27532592 . T . PASS END=27532592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 27532650 . C . PASS END=27532650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,197,255:40,0 chr2 27532700 . G . PASS END=27532700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr2 27532708 . T . PASS END=27532708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 27532726 . G . PASS END=27532726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr2 27532745 . T . PASS END=27532832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,153,255:40,0 chr2 27532833 . A . PASS END=27532849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,134,255:40,0 chr2 27534491 . T . PASS END=27534545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,133,255:40,0 chr2 27534765 . A . PASS END=27534765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 27534767 . C . PASS END=27534798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,848:0,72,255:25,0 chr2 27534799 . T . PASS END=27534806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 27534807 . C . PASS END=27534820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 27534826 . G . PASS END=27534826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 27535081 . C . PASS END=27535116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:42:0,105,1575:0,116,255:40,0 chr2 27535123 . A . PASS END=27535123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 27535361 . C . PASS END=27535363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27535364 . C . PASS END=27535370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 27535371 . T . PASS END=27535371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 27535372 . T . PASS END=27535396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr2 27535397 . T . PASS END=27535397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 27535398 . C . PASS END=27535423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,711:0,66,255:25,0 chr2 27535424 . A . PASS END=27535424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,718:0,58,255:23,0 chr2 27535425 . A . PASS END=27535456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,71,255:24,0 chr2 27535535 . T . PASS END=27535535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 27535546 . C . PASS END=27535603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,110,1535:0,110,255:40,0 chr2 27535604 . A . PASS END=27535604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:36,0 chr2 27535605 . T . PASS END=27535639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:86:33:0,86,1202:0,86,255:40,0 chr2 27535859 . A . PASS END=27535859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1341:0,105,255:35,0 chr2 27535861 . C . PASS END=27535880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1271:0,89,255:35,0 chr2 27535881 . A . PASS END=27535881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:32,0 chr2 27535882 . C . PASS END=27535884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1205:0,105,255:36,0 chr2 27535885 . C . PASS END=27535885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr2 27535886 . A . PASS END=27536028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:36:0,95,1319:0,95,255:40,0 chr2 27538948 . T . PASS END=27539053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,111,1665:0,130,255:40,0 chr2 27539945 . T . PASS END=27539946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27539947 . T . PASS END=27539947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 27539948 . T . PASS END=27539950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27539951 . G . PASS END=27539951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 27539952 . G . PASS END=27539961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 27539962 . T . PASS END=27539962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 27539963 . T . PASS END=27539969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr2 27539970 . C . PASS END=27539975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 27539976 . G . PASS END=27539976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 27539977 . C . PASS END=27539999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,984:0,81,255:31,0 chr2 27540000 . T . PASS END=27540000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr2 27540001 . G . PASS END=27540015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 27540016 . A . PASS END=27540016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 27540017 . A . PASS END=27540025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 27540026 . T . PASS END=27540047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,869:0,69,255:26,0 chr2 27540048 . G . PASS END=27540048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 27540049 . G . PASS END=27540049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 27540050 . C . PASS END=27540052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 27540053 . G . PASS END=27540067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:22,0 chr2 27540068 . T . PASS END=27540099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,599:0,51,255:18,0 chr2 27540100 . G . PASS END=27540101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 27545307 . A . PASS END=27545307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 27545310 . C . PASS END=27545310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 27545315 . C . PASS END=27545316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 27545317 . G . PASS END=27545317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 27545318 . C . PASS END=27545318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 27545319 . T . PASS END=27545319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 27545320 . G . PASS END=27545330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,643:0,41,255:19,0 chr2 27545331 . T . PASS END=27545334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 27545335 . T . PASS END=27545335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 27545336 . T . PASS END=27545336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 27545337 . C . PASS END=27545337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 27545338 . C . PASS END=27545384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,807:0,65,255:25,0 chr2 27545911 . C . PASS END=27545911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27545924 . C . PASS END=27545924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27547300 . C . PASS END=27547317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,191,255:40,0 chr2 27549056 . T . PASS END=27549085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,152,255:40,0 chr2 27549527 . T . PASS END=27549531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,766:0,63,255:22,0 chr2 27549532 . T . PASS END=27549532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 27549533 . G . PASS END=27549538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:24,0 chr2 27549539 . A . PASS END=27549755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1117:0,81,255:40,0 chr2 27549756 . C . PASS END=27549757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1158:0,66,255:31,0 chr2 27549758 . T . PASS END=27549760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 27550044 . C . PASS END=27550050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:33,0 chr2 27550051 . A . PASS END=27550051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr2 27550052 . T . PASS END=27550059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:33,0 chr2 27550060 . A . PASS END=27550060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr2 27550061 . G . PASS END=27550118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1169:0,80,255:36,0 chr2 27550119 . T . PASS END=27550151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 27550904 . C . PASS END=27550909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27550910 . T . PASS END=27550910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 27550911 . G . PASS END=27550929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,980:0,84,255:31,0 chr2 27550930 . A . PASS END=27550962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1043:0,80,255:40,0 chr2 27550963 . C . PASS END=27550963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1462:0,55,255:40,0 chr2 27550964 . C . PASS END=27550966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 27550967 . A G, 50.00 PASS DP=44;MQ=249.84;MQRankSum=5.152;ReadPosRankSum=-0.340;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,22,0:0.500,0.000:44:17,10,0:5,12,0:48:85,0,50,787,742,1529:255,0,255:20,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,9,13:10,12,11,11 chr2 27550968 . G . PASS END=27551004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,113,1580:0,113,255:40,0 chr2 27551005 . C . PASS END=27551047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:88:34:0,88,1189:0,88,255:40,0 chr2 27551048 . A . PASS END=27551048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:30,0 chr2 27551049 . T . PASS END=27551056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr2 27551272 . C . PASS END=27551463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:52:0,117,1787:0,117,255:40,2 chr2 27551711 . C . PASS END=27551798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:44:0,93,1395:0,131,255:40,0 chr2 27551988 . G . PASS END=27552149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:46:0,120,1800:0,137,255:40,0 chr2 27552246 . C . PASS END=27552390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:34:0,89,1241:0,89,255:40,0 chr2 27556497 . T . PASS END=27556514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,107,1414:0,107,255:40,0 chr2 27556517 . T . PASS END=27556610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,83,255:40,0 chr2 27556611 . G . PASS END=27556613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 27556614 . T . PASS END=27556614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:23,0 chr2 27556615 . G . PASS END=27556615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27556616 . C . PASS END=27556617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 27556618 . T . PASS END=27556625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:26,0 chr2 27556626 . A . PASS END=27556633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:18,0 chr2 27556634 . A . PASS END=27556634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:17,0 chr2 27556635 . G . PASS END=27556636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:18,0 chr2 27556637 . T . PASS END=27556651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr2 27556841 . C . PASS END=27556866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,131,255:40,0 chr2 27558194 . C . PASS END=27558207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr2 27558208 . G . PASS END=27558208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:17,0 chr2 27558209 . G . PASS END=27558214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,698:0,44,255:19,0 chr2 27558215 . A . PASS END=27558227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,652:0,57,255:19,0 chr2 27558228 . C . PASS END=27558240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr2 27558241 . A . PASS END=27558241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr2 27558242 . A . PASS END=27558246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 27558247 . G . PASS END=27558247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:21,0 chr2 27558248 . A . PASS END=27558251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 27558252 . A G, 50.00 PASS DP=25;MQ=250.00;MQRankSum=3.783;ReadPosRankSum=2.209;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,18,0:0.720,0.000:25:4,5,0:3,13,0:38:85,0,36,185,185,185:255,0,166:7,0:5.0001e+01,6.5005e-04,3.8549e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,3,13,5:5,2,6,12 chr2 27558253 . A . PASS END=27558254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27558255 . A . PASS END=27558255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 27558256 . G . PASS END=27558262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr2 27558263 . T . PASS END=27558263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:20,0 chr2 27558264 . G . PASS END=27558275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 27558276 . C . PASS END=27558289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 27558290 . C . PASS END=27558295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr2 27558465 . C . PASS END=27558477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 27558478 . A . PASS END=27558483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 27558484 . C . PASS END=27558486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27558487 . G . PASS END=27558489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 27558490 . C . PASS END=27558491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27558492 . C . PASS END=27558492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 27558493 . C . PASS END=27558547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:37,0 chr2 27558548 . A . PASS END=27558548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:29,0 chr2 27558549 . G . PASS END=27558557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1239:0,89,255:32,0 chr2 27558558 . G . PASS END=27558558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:26,0 chr2 27558559 . G . PASS END=27558566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 27558567 . G . PASS END=27558573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,964:0,70,255:24,0 chr2 27558784 . C . PASS END=27558895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:92:36:0,92,1302:0,92,255:40,0 chr2 27559065 . C . PASS END=27559081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,839:0,83,255:28,0 chr2 27559082 . G . PASS END=27559082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27559083 . G . PASS END=27559087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 27559088 . A . PASS END=27559088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 27559089 . A . PASS END=27559115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1117:0,90,255:32,0 chr2 27559116 . C . PASS END=27559118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27559119 . G . PASS END=27559119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 27559120 . A . PASS END=27559126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:30:0,75,1125:0,83,255:26,0 chr2 27559127 . C . PASS END=27559149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 27559150 . T . PASS END=27559234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,61,255:26,0 chr2 27559235 . T . PASS END=27559235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 27559236 . C . PASS END=27559242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 27559243 . T . PASS END=27559265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 27559266 . T . PASS END=27559279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr2 27559280 . G . PASS END=27559286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 27559287 . C . PASS END=27559292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 27560111 . C . PASS END=27560120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,772:0,69,255:26,0 chr2 27560121 . G . PASS END=27560125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr2 27560126 . A . PASS END=27560126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:29,0 chr2 27560127 . G . PASS END=27560131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:34,0 chr2 27560132 . C . PASS END=27560132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr2 27560133 . C . PASS END=27560133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr2 27560134 . A . PASS END=27560134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1168:0,74,255:34,0 chr2 27560135 . T . PASS END=27560201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:37:0,82,1374:0,82,255:39,0 chr2 27560202 . C . PASS END=27560202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:34,0 chr2 27560203 . G . PASS END=27560209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1327:0,95,255:36,0 chr2 27560348 . A . PASS END=27560425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,182,255:40,0 chr2 27560793 . A . PASS END=27560794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27560795 . G . PASS END=27560795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,950:0,48,255:27,0 chr2 27560796 . T . PASS END=27560796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 27560797 . C . PASS END=27560798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 27560799 . T . PASS END=27560799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,849:0,24,255:26,0 chr2 27560800 . T . PASS END=27560836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1069:0,80,255:34,0 chr2 27560837 . A . PASS END=27560837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1117:0,72,255:32,0 chr2 27560838 . T . PASS END=27560870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,94,255:37,0 chr2 27560871 . C . PASS END=27560886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr2 27560887 . T . PASS END=27560887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 27564815 . C . PASS END=27564827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 27564828 . C . PASS END=27564828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 27564829 . C . PASS END=27564831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 27564832 . G . PASS END=27564832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 27564833 . T . PASS END=27564874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,652:0,41,255:19,0 chr2 27564875 . C . PASS END=27564875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 27564876 . T . PASS END=27564922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,566:0,48,255:17,0 chr2 27564923 . A . PASS END=27564923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 27564924 . A . PASS END=27564927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:17,0 chr2 27564928 . A . PASS END=27564928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:14,0 chr2 27564929 . G . PASS END=27564931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 27564932 . T . PASS END=27564932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 27564933 . T . PASS END=27564949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:19,0 chr2 27564950 . A . PASS END=27564963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27564964 . C . PASS END=27564967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr2 27564968 . T . PASS END=27564968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:15,0 chr2 27564969 . G . PASS END=27564992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:16,0 chr2 27564993 . T . PASS END=27564993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr2 27564994 . T . PASS END=27564997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27564998 . C . PASS END=27565024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 27565025 . G . PASS END=27565026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27565027 . C . PASS END=27565031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 27565032 . G . PASS END=27565075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr2 27565076 . C . PASS END=27565099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 27565100 . C . PASS END=27565100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 27565693 . A . PASS END=27565693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 27565694 . C . PASS END=27565694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 27565695 . T . PASS END=27565695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 27565696 . T . PASS END=27565696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,0 chr2 27565697 . G . PASS END=27565697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 27565698 . G . PASS END=27565699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr2 27565700 . C . PASS END=27565701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 27565702 . G . PASS END=27565702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 27565703 . C . PASS END=27565705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1088:0,80,255:30,0 chr2 27565706 . T . PASS END=27565706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:30,0 chr2 27565707 . T . PASS END=27565715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1090:0,82,255:33,0 chr2 27565716 . T . PASS END=27565716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:32,0 chr2 27565717 . C . PASS END=27565719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:33,0 chr2 27565720 . T . PASS END=27565720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:31,0 chr2 27565721 . C . PASS END=27565808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:94:36:0,94,1282:0,94,255:40,0 chr2 27565809 . C . PASS END=27565809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr2 27565810 . A . PASS END=27565824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:36,0 chr2 27565825 . T . PASS END=27565825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr2 27565826 . T . PASS END=27565826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 27565827 . T . PASS END=27565828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr2 27565829 . G . PASS END=27565863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1172:0,83,255:33,0 chr2 27565864 . T . PASS END=27565881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr2 27565882 . C . PASS END=27565882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27565883 . C . PASS END=27565885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 27565886 . G . PASS END=27565886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 27565887 . A . PASS END=27565887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 27565888 . A . PASS END=27565888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27565889 . C . PASS END=27565890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 27565891 . A . PASS END=27565891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27565892 . G . PASS END=27565892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:25,0 chr2 27565893 . T . PASS END=27565911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1194:0,83,255:33,0 chr2 27565912 . G . PASS END=27565912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:30,0 chr2 27565913 . G . PASS END=27565963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1160:0,99,255:35,0 chr2 27565964 . C . PASS END=27565966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27565967 . G . PASS END=27565971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27565972 . G . PASS END=27565990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr2 27565991 . C . PASS END=27566014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 27566175 . C . PASS END=27566199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:18,0 chr2 27566200 . T . PASS END=27566201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 27566202 . C . PASS END=27566202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 27566203 . C . PASS END=27566225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,775:0,60,255:26,0 chr2 27566226 . G . PASS END=27566242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 27566243 . A . PASS END=27566243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,938:0,67,255:27,0 chr2 27566244 . A . PASS END=27566376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,914:0,84,255:38,0 chr2 27566377 . G . PASS END=27566402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:26,0 chr2 27566403 . C . PASS END=27566416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:18,0 chr2 27566417 . T . PASS END=27566439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr2 27566440 . C . PASS END=27566440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 27566441 . T . PASS END=27566441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 27566442 . G . PASS END=27566442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 27566443 . C . PASS END=27566445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr2 27573181 . C . PASS END=27573273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,107,1607:0,107,255:40,0 chr2 27578954 . C . PASS END=27578954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 27578955 . C . PASS END=27578968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,853:0,62,255:26,0 chr2 27578969 . A . PASS END=27578974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,883:0,81,255:27,0 chr2 27578975 . G . PASS END=27578975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 27578976 . T . PASS END=27578976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,847:0,34,255:25,0 chr2 27578977 . G . PASS END=27578984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 27578985 . T . PASS END=27578985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr2 27578986 . C . PASS END=27578986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 27578987 . C . PASS END=27578987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 27578988 . G . PASS END=27579043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1031:0,80,255:33,0 chr2 27579044 . G . PASS END=27579044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr2 27579045 . A . PASS END=27579092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1097:0,80,255:34,0 chr2 27579093 . G . PASS END=27579093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 27579094 . G . PASS END=27579101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1211:0,85,255:30,0 chr2 27579102 . G . PASS END=27579102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:30,0 chr2 27579103 . C . PASS END=27579115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,85,255:32,0 chr2 27579116 . A . PASS END=27579139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr2 27579140 . C . PASS END=27579140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 27579141 . G . PASS END=27579142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 27579143 . G . PASS END=27579143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 27579144 . G . PASS END=27579145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 27579146 . A . PASS END=27579146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:21,0 chr2 27579147 . G . PASS END=27579170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,607:0,40,255:19,0 chr2 27579171 . A . PASS END=27579171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr2 27579172 . T . PASS END=27579183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr2 27579184 . C . PASS END=27579193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr2 27579194 . G . PASS END=27579198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr2 27587228 . G . PASS END=27587228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 27587267 . T . PASS END=27587460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1215:0,82,255:40,0 chr2 27587461 . G . PASS END=27587466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1076:0,74,255:26,0 chr2 27587470 . C . PASS END=27587470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr2 27587585 . C . PASS END=27587740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1083:0,80,255:40,0 chr2 27587741 . G . PASS END=27587765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,900:0,63,255:26,0 chr2 27589613 . C . PASS END=27589613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 27589624 . A . PASS END=27589629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 27589630 . G . PASS END=27589633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27589634 . G . PASS END=27589772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1147:0,80,255:40,0 chr2 27589773 . C . PASS END=27589798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1045:0,83,255:34,0 chr2 27589799 . A . PASS END=27589803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,79,255:24,0 chr2 27589941 . C . PASS END=27590162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,120,1800:0,129,255:40,0 chr2 27590324 . C . PASS END=27590426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,115,1537:0,115,255:40,0 chr2 27590613 . C . PASS END=27590689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:65:0,120,1800:0,168,255:40,0 chr2 27590892 . C . PASS END=27591006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:32:0,84,1218:0,86,255:40,0 chr2 27591239 . C . PASS END=27591330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:47:0,100,1601:0,100,255:40,0 chr2 27591521 . C . PASS END=27591600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:53:0,118,1800:0,118,255:40,0 chr2 27591873 . C . PASS END=27591880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 27591881 . G . PASS END=27591882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:19,0 chr2 27591883 . T . PASS END=27591884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27591885 . C . PASS END=27591889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 27591890 . G . PASS END=27591890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 27591891 . C . PASS END=27591891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 27591892 . T . PASS END=27591903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,902:0,62,255:25,0 chr2 27591904 . G . PASS END=27591928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr2 27591929 . T . PASS END=27591929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 27591930 . C . PASS END=27591941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1050:0,87,255:30,0 chr2 27591942 . C . PASS END=27591942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 27591943 . C . PASS END=27592008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:30:0,86,1155:0,86,255:34,0 chr2 27592009 . A . PASS END=27592009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:27,0 chr2 27592010 . C . PASS END=27592011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 27592012 . A . PASS END=27592012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 27592013 . G . PASS END=27592013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 27592014 . C . PASS END=27592014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:29,0 chr2 27592015 . T . PASS END=27592021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:31,0 chr2 27592022 . T . PASS END=27592022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 27592023 . T . PASS END=27592024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,939:0,92,255:31,0 chr2 27592025 . T . PASS END=27592025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 27592026 . C . PASS END=27592031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 27592032 . G . PASS END=27592045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,931:0,64,255:26,0 chr2 27592046 . A . PASS END=27592065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:23:0,42,630:0,59,255:19,0 chr2 27592066 . T . PASS END=27592066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:39:23:0,39,585:0,53,255:12,0 chr2 27592067 . C . PASS END=27592079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,52,255:15,0 chr2 27592270 . C . PASS END=27592270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 27592281 . C . PASS END=27592289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1269:0,84,255:40,0 chr2 27592290 . G . PASS END=27592290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1364:0,54,255:38,0 chr2 27592291 . G . PASS END=27592385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,109,1541:0,109,255:40,0 chr2 27592386 . T . PASS END=27592416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,114,1705:0,114,255:40,0 chr2 27592743 . C . PASS END=27592752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,698:0,57,255:19,0 chr2 27592753 . G . PASS END=27592754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27592755 . G . PASS END=27592755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 27592756 . G . PASS END=27592759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27592760 . G . PASS END=27592760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:20,0 chr2 27592761 . C . PASS END=27592817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,780:0,63,255:24,0 chr2 27592818 . A . PASS END=27592818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 27592819 . G . PASS END=27592821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr2 27592822 . A . PASS END=27592822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:22,0 chr2 27592823 . G . PASS END=27592848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,61,255:24,0 chr2 27592849 . G . PASS END=27592850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 27592851 . A . PASS END=27592860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 27592861 . G . PASS END=27592861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:19,0 chr2 27592862 . C . PASS END=27592865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 27592866 . C . PASS END=27592880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:19,0 chr2 27593143 . T . PASS END=27593181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1564:0,113,255:40,0 chr2 27593183 . G . PASS END=27593183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 27593224 . C . PASS END=27593224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 27593271 . C . PASS END=27593271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:33,0 chr2 27593297 . C . PASS END=27593297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 27593506 . A . PASS END=27593508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1013:0,90,255:30,0 chr2 27593611 . A . PASS END=27593619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr2 27593620 . T . PASS END=27593620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 27593621 . C . PASS END=27593660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:18,0 chr2 27593661 . C . PASS END=27593673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 27594136 . G . PASS END=27594139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 27594140 . A . PASS END=27594214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,926:0,81,255:36,0 chr2 27594215 . G . PASS END=27594234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr2 27595490 . C . PASS END=27595607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:45:0,96,1440:0,125,255:40,0 chr2 27595907 . T . PASS END=27595914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:46:0,105,1583:0,105,255:40,0 chr2 27596114 . T . PASS END=27596178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,109,1378:0,109,255:40,0 chr2 27596728 . G . PASS END=27596838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,99,1410:0,101,255:40,0 chr2 27596952 . G . PASS END=27597042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,131,255:40,0 chr2 27597213 . T . PASS END=27597220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1432:0,96,255:40,0 chr2 27597221 . A . PASS END=27597223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1418:0,65,255:40,0 chr2 27597224 . T . PASS END=27597240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,105,1527:0,105,255:40,0 chr2 27597241 . G . PASS END=27597300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1118:0,91,255:40,0 chr2 27597556 . T . PASS END=27597625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:46:0,120,1800:0,122,255:40,0 chr2 27597928 . A . PASS END=27598020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,142,255:40,0 chr2 27598373 . T . PASS END=27598383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,654:0,54,255:19,0 chr2 27598384 . G . PASS END=27598394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:23,0 chr2 27598395 . T . PASS END=27598395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 27598396 . G . PASS END=27598403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 27598404 . A . PASS END=27598404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 27598405 . T . PASS END=27598411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,969:0,75,255:25,0 chr2 27598412 . T . PASS END=27598412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 27598413 . T . PASS END=27598414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27598415 . C . PASS END=27598415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 27598416 . G . PASS END=27598465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,947:0,62,255:26,0 chr2 27598466 . G . PASS END=27598466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr2 27598467 . T . PASS END=27598480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr2 27598481 . A . PASS END=27598481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27598482 . G . PASS END=27598499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr2 27598500 . T . PASS END=27598500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 27598501 . C . PASS END=27598540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,884:0,69,255:23,0 chr2 27598541 . G . PASS END=27598576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,631:0,50,255:19,0 chr2 27598713 . G . PASS END=27598715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 27598716 . C . PASS END=27598722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr2 27598723 . C . PASS END=27598725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27598726 . G . PASS END=27598726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27598727 . T . PASS END=27598727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 27598728 . G . PASS END=27598801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1047:0,84,255:37,0 chr2 27598802 . G . PASS END=27598802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr2 27598803 . G . PASS END=27598838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1260:0,93,255:36,0 chr2 27598973 . G . PASS END=27599050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:53:0,120,1800:0,124,255:40,0 chr2 27599180 . A . PASS END=27599191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:29,0 chr2 27599192 . C . PASS END=27599192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr2 27599193 . G . PASS END=27599197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr2 27599198 . G . PASS END=27599198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 27599199 . G . PASS END=27599232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1158:0,96,255:32,0 chr2 27599233 . A . PASS END=27599233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:29,0 chr2 27599234 . G . PASS END=27599238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:30,0 chr2 27599239 . G . PASS END=27599240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr2 27599241 . C . PASS END=27599254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1041:0,84,255:28,0 chr2 27599346 . G . PASS END=27599382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1242:0,81,255:36,0 chr2 27599383 . T . PASS END=27599383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1097:0,74,255:32,0 chr2 27599384 . C . PASS END=27599387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 27599473 . A . PASS END=27599477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:26,0 chr2 27599478 . G . PASS END=27599482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 27599483 . G . PASS END=27599483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 27599484 . T . PASS END=27599501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1147:0,87,255:32,0 chr2 27599502 . A . PASS END=27599502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 27599503 . A . PASS END=27599529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr2 27599530 . G . PASS END=27599531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27599532 . C . PASS END=27599536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27599537 . A . PASS END=27599537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 27599538 . T . PASS END=27599538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27599539 . G . PASS END=27599544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 27599545 . G . PASS END=27599545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 27599546 . G . PASS END=27599586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 27600136 . A . PASS END=27600136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 27600158 . A . PASS END=27600158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 27600187 . C . PASS END=27600187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 27600195 . C . PASS END=27600195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 27600238 . C . PASS END=27600238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27600248 . C . PASS END=27600248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27600278 . T . PASS END=27600278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 27600283 . C . PASS END=27600283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 27600352 . G . PASS END=27600352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 27600358 . G . PASS END=27600358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27600383 . G . PASS END=27600383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27600397 . G . PASS END=27600397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27600412 . T . PASS END=27600450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,876:0,69,255:25,0 chr2 27600451 . C . PASS END=27600452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 27600453 . C . PASS END=27600453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:28,0 chr2 27600454 . C . PASS END=27600589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1109:0,80,255:38,0 chr2 27600590 . T . PASS END=27600590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr2 27600591 . G . PASS END=27600596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 27600597 . T . PASS END=27600598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:25,0 chr2 27600599 . G . PASS END=27600600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:27,0 chr2 27600601 . A . PASS END=27600601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,92,255:25,0 chr2 27600602 . T . PASS END=27600606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,85,255:28,0 chr2 27600607 . G . PASS END=27600608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr2 27600609 . A . PASS END=27600611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27600612 . T . PASS END=27600612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 27600613 . G . PASS END=27600613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27600614 . G . PASS END=27600614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 27600615 . C . PASS END=27600616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27600617 . C . PASS END=27600624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27600625 . G . PASS END=27600625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27600626 . G . PASS END=27600627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 27600628 . C . PASS END=27600629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 27600630 . T . PASS END=27600630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:27,0 chr2 27600631 . C . PASS END=27600631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 27600632 . T . PASS END=27600636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27600637 . T . PASS END=27600644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr2 27600645 . G . PASS END=27600645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27600646 . C . PASS END=27600649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 27600650 . A . PASS END=27600650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,961:0,40,255:26,0 chr2 27600651 . T . PASS END=27600654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27600655 . A . PASS END=27600655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27600656 . C . PASS END=27600659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr2 27600660 . T . PASS END=27600660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr2 27600661 . G . PASS END=27600661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27600662 . A . PASS END=27600662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27600663 . G . PASS END=27600664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 27600665 . T . PASS END=27600665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,944:0,76,255:28,0 chr2 27600666 . T . PASS END=27600669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 27600670 . G . PASS END=27600670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 27600671 . C . PASS END=27600672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 27600673 . C . PASS END=27600673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 27600674 . T . PASS END=27600685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1074:0,90,255:31,0 chr2 27600686 . T . PASS END=27600686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:29,0 chr2 27600687 . A . PASS END=27600696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr2 27600697 . G . PASS END=27600697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:30,0 chr2 27600698 . C . PASS END=27600717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1058:0,80,255:31,0 chr2 27600718 . A . PASS END=27600718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 27600719 . C . PASS END=27600732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1163:0,80,255:32,0 chr2 27600733 . A . PASS END=27600733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:30,0 chr2 27600734 . C . PASS END=27600764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1088:0,80,255:32,0 chr2 27600765 . A . PASS END=27600822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,862:0,61,255:26,0 chr2 27600823 . C . PASS END=27600823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr2 27600824 . C . PASS END=27600858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 27600859 . A . PASS END=27600860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27600861 . A . PASS END=27600865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27600866 . G . PASS END=27600871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 27600872 . C . PASS END=27600878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr2 27600879 . G . PASS END=27600882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:21:0,53,790:0,53,255:20,0 chr2 27600883 . C . PASS END=27600894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 27600895 . T . PASS END=27600895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,611:0,27,255:19,0 chr2 27600896 . G . PASS END=27600915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 27600916 . G . PASS END=27600941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,721:0,47,255:19,0 chr2 27600942 . G . PASS END=27600942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr2 27600943 . G . PASS END=27600968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,629:0,54,255:19,0 chr2 27600969 . C . PASS END=27600969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27600970 . A . PASS END=27600979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr2 27600980 . T . PASS END=27600981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27600982 . G . PASS END=27600995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 27600996 . C . PASS END=27600996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,565:0,10,255:15,0 chr2 27600997 . A . PASS END=27601000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr2 27601001 . C . PASS END=27601029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 27601030 . A . PASS END=27601033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 27601034 . A . PASS END=27601034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 27601035 . T . PASS END=27601050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr2 27601051 . A . PASS END=27601051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 27601052 . C . PASS END=27601071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1111:0,83,255:31,0 chr2 27601072 . C . PASS END=27601072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 27601073 . T . PASS END=27601085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1074:0,90,255:31,0 chr2 27601086 . C . PASS END=27601086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 27601087 . C . PASS END=27601099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1132:0,93,255:31,0 chr2 27601100 . G . PASS END=27601100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 27601101 . G . PASS END=27601105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27601106 . A . PASS END=27601109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr2 27601110 . G . PASS END=27601110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:24,0 chr2 27601111 . C . PASS END=27601141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:25,0 chr2 27601142 . A . PASS END=27601168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr2 27601169 . C . PASS END=27601176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,37,255:13,0 chr2 27601177 . T . PASS END=27601187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 27601188 . T . PASS END=27601188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 27601189 . G . PASS END=27601191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 27601192 . A . PASS END=27601192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 27601193 . C . PASS END=27601204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 27601205 . A . PASS END=27601238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,521:0,45,255:18,0 chr2 27601334 . C . PASS END=27601473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1305:0,87,255:40,0 chr2 27601474 . T . PASS END=27601475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 27601476 . G . PASS END=27601479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 27601480 . A . PASS END=27601480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 27601481 . G . PASS END=27601491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr2 27601492 . G . PASS END=27601492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:25,0 chr2 27601493 . C . PASS END=27601493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27601494 . A . PASS END=27601496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 27601497 . G . PASS END=27601497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:23,0 chr2 27601498 . G . PASS END=27601517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1000:0,68,255:26,0 chr2 27601518 . G . PASS END=27601518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27601519 . G . PASS END=27601529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,947:0,67,255:25,0 chr2 27601530 . A . PASS END=27601530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 27601531 . G . PASS END=27601565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,876:0,69,255:24,0 chr2 27601566 . C . PASS END=27601651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:19,0 chr2 27601652 . A . PASS END=27601654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 27601655 . G . PASS END=27601767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,553:0,41,255:19,0 chr2 27601768 . A . PASS END=27601768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 27601769 . G . PASS END=27601778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,621:0,51,255:17,0 chr2 27601779 . T . PASS END=27601779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 27601780 . G . PASS END=27601784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 27601785 . T . PASS END=27601785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 27601786 . G . PASS END=27601899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,625:0,41,255:19,0 chr2 27601900 . G . PASS END=27601908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 27601909 . C . PASS END=27601921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 27602960 . C . PASS END=27603115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:83:41:0,83,1455:0,83,255:40,0 chr2 27603339 . C . PASS END=27603339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 27603340 . T . PASS END=27603340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 27603341 . T . PASS END=27603349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,799:0,69,255:24,0 chr2 27603350 . T . PASS END=27603350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 27603351 . C . PASS END=27603351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 27603352 . G . PASS END=27603352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr2 27603353 . C . PASS END=27603353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr2 27603354 . A . PASS END=27603355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:23,0 chr2 27603356 . T . PASS END=27603357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,789:0,72,255:24,0 chr2 27603358 . C . PASS END=27603359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,786:0,41,255:23,0 chr2 27603360 . C . PASS END=27603363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27603364 . C . PASS END=27603364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 27603365 . T . PASS END=27603365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27603366 . G . PASS END=27603366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 27603367 . C . PASS END=27603367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27603368 . G . PASS END=27603368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 27603369 . G . PASS END=27603374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 27603375 . T . PASS END=27603375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,752:0,55,255:22,0 chr2 27603376 . T . PASS END=27603389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 27603390 . G . PASS END=27603393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr2 27603401 . G . PASS END=27603401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 27603417 . G . PASS END=27603417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 27603441 . C . PASS END=27603441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 27603444 . G . PASS END=27603444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 27603484 . G . PASS END=27603484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 27603489 . C . PASS END=27603489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr2 27603496 . C . PASS END=27603496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 27603518 . C . PASS END=27603518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 27603581 . C . PASS END=27603581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 27603595 . G . PASS END=27603595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr2 27603606 . C . PASS END=27603606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 27604466 . C . PASS END=27604624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:37:0,80,1305:0,80,255:40,0 chr2 27604625 . C . PASS END=27604637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:29:0,69,1035:0,71,255:24,0 chr2 27604638 . C . PASS END=27604638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:23,0 chr2 27604639 . C . PASS END=27604660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,62,255:24,0 chr2 27604661 . C . PASS END=27604672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 27604993 . C . PASS END=27605095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,132,255:40,0 chr2 27605343 . C . PASS END=27605352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr2 27605353 . C . PASS END=27605356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr2 27605357 . G . PASS END=27605457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1125:0,87,255:38,0 chr2 27605458 . T . PASS END=27605458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:32,0 chr2 27605459 . A . PASS END=27605472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1257:0,89,255:34,0 chr2 27606233 . C . PASS END=27606452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:28:0,80,1039:0,80,255:40,0 chr2 27606453 . A . PASS END=27606463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:25,0 chr2 27606464 . C . PASS END=27606467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 27606819 . C . PASS END=27606959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:55:0,120,1800:0,149,255:40,1 chr2 27607540 . C . PASS END=27607545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 27607546 . G . PASS END=27607546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 27607547 . T . PASS END=27607549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 27607550 . T . PASS END=27607550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 27607551 . C . PASS END=27607559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 27607560 . C . PASS END=27607565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 27607566 . C . PASS END=27607568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27607569 . C . PASS END=27607573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 27607574 . G . PASS END=27607577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27607578 . C . PASS END=27607613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,62,255:26,0 chr2 27607614 . C . PASS END=27607628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 27607629 . C . PASS END=27607632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr2 27607633 . G . PASS END=27607926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1064:0,83,255:40,0 chr2 27607927 . A . PASS END=27607953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:25:0,68,1030:0,68,255:26,0 chr2 27607954 . C . PASS END=27607955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 27608614 . C . PASS END=27608615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1194:0,68,255:37,0 chr2 27608616 . T . PASS END=27608642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:44:0,106,1515:0,106,255:40,0 chr2 27608643 . T . PASS END=27608643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1612:0,72,255:40,0 chr2 27608644 . C . PASS END=27608746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,102,1530:0,105,255:40,0 chr2 27609061 . C . PASS END=27609146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,125,255:40,0 chr2 27609956 . C . PASS END=27610025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:94:41:0,94,1362:0,94,255:40,0 chr2 27632170 . C . PASS END=27632170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 27632171 . T . PASS END=27632172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 27632173 . C . PASS END=27632173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 27632174 . A . PASS END=27632175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 27632176 . G . PASS END=27632176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 27632177 . G . PASS END=27632177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 27632178 . A . PASS END=27632178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 27632179 . G . PASS END=27632179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 27632180 . A . PASS END=27632180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:10,0 chr2 27632181 . C . PASS END=27632204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr2 27632205 . A . PASS END=27632218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:19,0 chr2 27632219 . G . PASS END=27632286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,751:0,60,255:26,0 chr2 27632287 . C . PASS END=27632289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27656141 . A . PASS END=27656154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr2 27656155 . G . PASS END=27656156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27656157 . C . PASS END=27656164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 27656165 . G . PASS END=27656345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1203:0,83,255:40,0 chr2 27656346 . A . PASS END=27656347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27656348 . G . PASS END=27656350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 27656540 . G . PASS END=27656559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1258:0,80,255:37,0 chr2 27656560 . A . PASS END=27656560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1278:0,56,255:33,0 chr2 27656561 . G . PASS END=27656662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:44:0,88,1499:0,88,255:40,0 chr2 27656856 . G . PASS END=27656865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,194,255:40,0 chr2 27656866 . G . PASS END=27656957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,135,255:40,0 chr2 27657338 . G . PASS END=27657427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:63:0,120,1800:0,176,255:40,0 chr2 27657589 . G . PASS END=27657629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,177,255:40,0 chr2 27658000 . C . PASS END=27658000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 27658001 . T . PASS END=27658036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,1002:0,80,255:38,0 chr2 27658037 . A . PASS END=27658037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1286:0,56,255:35,0 chr2 27658038 . A . PASS END=27658056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1349:0,98,255:37,0 chr2 27658057 . C . PASS END=27658057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1302:0,67,255:35,0 chr2 27658058 . T . PASS END=27658085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1219:0,88,255:36,0 chr2 27658086 . T . PASS END=27658086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,914:0,65,255:25,0 chr2 27658087 . T . PASS END=27658089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27658090 . C . PASS END=27658094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 27658590 . T . PASS END=27658613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1193:0,86,255:30,0 chr2 27659620 . T . PASS END=27659703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,99,1661:0,99,255:40,0 chr2 27659914 . A . PASS END=27659972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:38:0,86,1399:0,86,255:40,0 chr2 27660129 . A . PASS END=27660130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1496:0,104,255:38,2 chr2 27660131 . G . PASS END=27660131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:37:41:0,37,1341:0,37,255:37,2 chr2 27660132 . G . PASS END=27660152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:39:0,82,1473:0,82,255:40,0 chr2 27660153 . A . PASS END=27660197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,101,1382:0,101,255:40,0 chr2 27660198 . A . PASS END=27660199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:61:39:0,61,1238:0,61,255:35,0 chr2 27660200 . C . PASS END=27660222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1225:0,89,255:35,0 chr2 27660223 . A . PASS END=27660227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:36:0,66,990:0,108,255:24,0 chr2 27662633 . G . PASS END=27662747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,91,255:40,0 chr2 27662748 . G . PASS END=27662765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:64:27:0,64,901:0,64,255:26,0 chr2 27663270 . A . PASS END=27663375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,109,1598:0,109,255:40,0 chr2 27663519 . G . PASS END=27663569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,110,1800:0,110,255:40,0 chr2 27663672 . G . PASS END=27663807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1259:0,84,255:40,0 chr2 27663994 . G . PASS END=27664047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,152,255:40,0 chr2 27664134 . C . PASS END=27664191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:39:0,86,1382:0,86,255:40,0 chr2 27664192 . T . PASS END=27664192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1307:0,78,255:33,0 chr2 27664193 . G . PASS END=27664197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:38:0,84,1311:0,84,255:33,0 chr2 27664434 . A . PASS END=27664442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1097:0,93,255:31,0 chr2 27664443 . T . PASS END=27664443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 27664444 . C . PASS END=27664459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1157:0,87,255:31,0 chr2 27664460 . G . PASS END=27664489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:25,0 chr2 27664575 . G . PASS END=27664576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 27664577 . T . PASS END=27664577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:18,0 chr2 27664578 . G . PASS END=27664622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,821:0,69,255:23,0 chr2 27664623 . T . PASS END=27664623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 27664624 . T . PASS END=27664626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 27664627 . A . PASS END=27664627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 27664628 . T . PASS END=27664635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 27664636 . G . PASS END=27664638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:19,0 chr2 27664639 . A . PASS END=27664641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 27664642 . G . PASS END=27664644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27664645 . C . PASS END=27664645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27664646 . C . PASS END=27664679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:19,0 chr2 27665280 . A . PASS END=27665307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1441:0,101,255:40,0 chr2 27665446 . A . PASS END=27665450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 27665451 . G . PASS END=27665451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 27665452 . C . PASS END=27665452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 27665453 . C . PASS END=27665453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 27665454 . C . PASS END=27665462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr2 27665463 . A . PASS END=27665463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 27665464 . G . PASS END=27665469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 27665470 . T . PASS END=27665470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 27665471 . G . PASS END=27665475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:24,0 chr2 27665476 . G . PASS END=27665482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 27665483 . C . PASS END=27665483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr2 27665484 . C . PASS END=27665487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27665488 . C . PASS END=27665489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27665490 . C . PASS END=27665505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:26:0,60,833:0,60,255:25,0 chr2 27665506 . A . PASS END=27665506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 27665507 . C . PASS END=27665511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27665512 . A . PASS END=27665512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr2 27665513 . C . PASS END=27665515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,878:0,72,255:24,0 chr2 27665516 . G . PASS END=27665516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,756:0,33,255:21,0 chr2 27665517 . C . PASS END=27665575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,809:0,65,255:25,0 chr2 27665576 . T . PASS END=27665576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 27665577 . G . PASS END=27665577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 27665578 . T . PASS END=27665578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 27665579 . C . PASS END=27665583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 27665584 . C . PASS END=27665584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 27665585 . G . PASS END=27665586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 27665587 . A . PASS END=27665587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 27665588 . G . PASS END=27665589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27665590 . A . PASS END=27665590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:19,0 chr2 27665591 . C . PASS END=27665598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr2 27665599 . C . PASS END=27665616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr2 27665617 . G . PASS END=27665617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:17,0 chr2 27665618 . C . PASS END=27665630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,698:0,44,255:19,0 chr2 27665709 . A . PASS END=27665710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 27665711 . C . PASS END=27665711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 27665712 . G . PASS END=27665717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr2 27665718 . G . PASS END=27665718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 27665719 . T . PASS END=27665723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 27665724 . C . PASS END=27665731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:21,0 chr2 27665732 . C . PASS END=27665732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 27665733 . C . PASS END=27665734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 27665735 . C . PASS END=27665736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 27665737 . T . PASS END=27665751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:23,0 chr2 27665752 . T . PASS END=27665752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 27665753 . T . PASS END=27665753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,674:0,36,255:20,0 chr2 27665754 . C . PASS END=27665755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27665756 . T . PASS END=27665762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 27665763 . C . PASS END=27665768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:21,0 chr2 27665941 . C . PASS END=27665944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1246:0,105,255:35,0 chr2 27665945 . G . PASS END=27665945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:35,0 chr2 27665946 . G . PASS END=27666098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1302:0,91,255:40,0 chr2 27666099 . T . PASS END=27666099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1207:0,69,255:32,0 chr2 27666100 . G . PASS END=27666104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:33,0 chr2 27666105 . G . PASS END=27666121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:26,0 chr2 27666122 . G . PASS END=27666131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr2 27666132 . C . PASS END=27666133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 27666134 . C . PASS END=27666134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr2 27666135 . C . PASS END=27666138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27666139 . A . PASS END=27666139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:18,0 chr2 27666140 . G . PASS END=27666143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27666144 . C . PASS END=27666147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 27666265 . G . PASS END=27666266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr2 27666267 . T . PASS END=27666267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 27666268 . A . PASS END=27666288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,785:0,69,255:24,0 chr2 27666289 . C . PASS END=27666289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 27666290 . C . PASS END=27666304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,923:0,62,255:26,0 chr2 27666305 . C . PASS END=27666369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1100:0,80,255:36,0 chr2 27666370 . C . PASS END=27666371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr2 27666372 . C . PASS END=27666372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:25,0 chr2 27666373 . T . PASS END=27666373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:25,0 chr2 27666374 . G . PASS END=27666374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr2 27666375 . C . PASS END=27666399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,953:0,65,255:25,0 chr2 27666816 . C . PASS END=27666923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:93:42:0,93,1407:0,93,255:40,0 chr2 27667299 . C . PASS END=27667303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1239:0,89,255:35,0 chr2 27667304 . G . PASS END=27667304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:33,0 chr2 27667305 . A . PASS END=27667334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1282:0,92,255:40,0 chr2 27667335 . A . PASS END=27667372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1260:0,93,255:40,0 chr2 27667373 . C . PASS END=27667376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27667377 . G . PASS END=27667382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 27667383 . G . PASS END=27667388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 27667876 . C . PASS END=27667876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 27667881 . C . PASS END=27667972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:49:0,91,1609:0,91,255:40,0 chr2 27668163 . C . PASS END=27668296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1119:0,86,255:40,0 chr2 27668297 . A . PASS END=27668306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1070:0,63,255:26,0 chr2 27668307 . T . PASS END=27668307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:24,0 chr2 27668308 . C . PASS END=27668314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 27668315 . T . PASS END=27668315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:25,0 chr2 27668316 . C . PASS END=27668316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27668494 . T . PASS END=27668496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 27668612 . C . PASS END=27668710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,108,1520:0,110,255:40,0 chr2 27668796 . A . PASS END=27668855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1350:0,102,255:40,0 chr2 27669127 . C . PASS END=27669128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:34,0 chr2 27669129 . T . PASS END=27669129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:32,0 chr2 27669130 . G . PASS END=27669222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:34:0,89,1241:0,89,255:40,0 chr2 27670382 . C . PASS END=27670386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,884:0,69,255:23,0 chr2 27670387 . G . PASS END=27670394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:29,0 chr2 27670395 . C . PASS END=27670397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr2 27670398 . T . PASS END=27670398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:28,0 chr2 27670399 . G . PASS END=27670516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1135:0,80,255:40,0 chr2 27670679 . C . PASS END=27670767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:39:0,84,1361:0,84,255:40,0 chr2 27670768 . T . PASS END=27670768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:34,0 chr2 27670769 . C . PASS END=27670777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1356:0,98,255:35,0 chr2 27670778 . G . PASS END=27670778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 27670779 . A . PASS END=27670780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1119:0,72,255:32,0 chr2 27670781 . A . PASS END=27670787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,88,255:34,0 chr2 27670788 . T . PASS END=27670788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:29,0 chr2 27670789 . T . PASS END=27670789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 27671782 . C . PASS END=27671783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr2 27671784 . G . PASS END=27671793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr2 27671794 . A . PASS END=27671794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 27671795 . G . PASS END=27671799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:29,0 chr2 27671800 . T . PASS END=27671800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 27671801 . C . PASS END=27671898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:30:0,87,1163:0,90,255:40,0 chr2 27672161 . C . PASS END=27672247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,113,1443:0,113,255:40,0 chr2 27672366 . C . PASS END=27672429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,186,255:40,0 chr2 27672558 . C . PASS END=27672668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,114,1710:0,120,255:40,0 chr2 27672865 . T . PASS END=27672963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:54:0,120,1800:0,152,255:40,0 chr2 27676022 . T . PASS END=27676137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,120,1800:0,124,255:40,0 chr2 27676251 . C . PASS END=27676286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:94:43:0,94,1590:0,94,255:40,0 chr2 27676287 . A T, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.778;ReadPosRankSum=4.477;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,25,0:0.543,0.000:46:10,13,0:11,12,0:48:85,0,49,886,751,1637:255,0,255:20,0:5.0000e+01,6.8857e-05,5.2341e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,13,12:12,9,13,12 chr2 27676288 . G . PASS END=27676324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:41:0,91,1530:0,91,255:40,0 chr2 27676325 . T . PASS END=27676377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1109:0,83,255:35,0 chr2 27676378 . C . PASS END=27676380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1049:0,76,255:26,0 chr2 27676497 . C . PASS END=27676574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:38:0,83,1329:0,83,255:40,0 chr2 27676575 . A . PASS END=27676575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1272:0,72,255:32,0 chr2 27676576 . T . PASS END=27676587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,92,255:33,0 chr2 27676588 . C . PASS END=27676599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,74,255:24,0 chr2 27676600 . C . PASS END=27676600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 27676601 . A . PASS END=27676605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 27676606 . C . PASS END=27676606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr2 27676849 . C . PASS END=27676852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 27676853 . T . PASS END=27676853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 27676854 . A . PASS END=27676867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,801:0,69,255:23,0 chr2 27676868 . A . PASS END=27676868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 27676869 . G . PASS END=27676896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,817:0,65,255:26,0 chr2 27676897 . C . PASS END=27676909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:28,0 chr2 27676910 . T . PASS END=27676911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 27676912 . A . PASS END=27676916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr2 27676917 . C . PASS END=27676917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:27,0 chr2 27676918 . C . PASS END=27676926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr2 27676927 . C . PASS END=27676927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 27676928 . A . PASS END=27676940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1108:0,87,255:31,0 chr2 27676941 . C . PASS END=27676952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:67:28:0,67,970:0,67,255:27,0 chr2 27676953 . G . PASS END=27676953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 27676954 . C . PASS END=27676981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 27676982 . G . PASS END=27676982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr2 27676983 . C . PASS END=27677001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,815:0,66,255:24,0 chr2 27677002 . T . PASS END=27677006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 27677007 . C . PASS END=27677008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27677009 . C . PASS END=27677029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:17,0 chr2 27677221 . A . PASS END=27677285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,155,255:40,0 chr2 27677434 . C . PASS END=27677527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,125,255:40,0 chr2 27679378 . C . PASS END=27679386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:23,0 chr2 27679387 . G . PASS END=27679387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 27679388 . C . PASS END=27679394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr2 27679395 . G . PASS END=27679489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1008:0,81,255:38,0 chr2 27679490 . G . PASS END=27679515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr2 27679516 . G . PASS END=27679516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 27679517 . C . PASS END=27679518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 27679519 . A . PASS END=27679520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 27680505 . C . PASS END=27680505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27680506 . C . PASS END=27680506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:21,0 chr2 27680507 . C . PASS END=27680507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 27680508 . T . PASS END=27680516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,959:0,65,255:26,0 chr2 27680517 . C . PASS END=27680541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr2 27680542 . C . PASS END=27680542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:28,0 chr2 27680543 . A . PASS END=27680555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1113:0,93,255:31,0 chr2 27680556 . C . PASS END=27680556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr2 27680557 . C . PASS END=27680566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1180:0,93,255:31,0 chr2 27680567 . T . PASS END=27680568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27680569 . G . PASS END=27680591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:32,0 chr2 27680592 . C . PASS END=27680594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 27680595 . C . PASS END=27680622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1103:0,83,255:32,0 chr2 27680627 . A . PASS END=27680627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 27680708 . C . PASS END=27680843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,117,1755:0,133,255:40,0 chr2 27680993 . C . PASS END=27681090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,125,255:40,0 chr2 27681646 . C . PASS END=27681647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr2 27681648 . T . PASS END=27681648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1575:0,77,255:40,0 chr2 27681649 . G . PASS END=27681735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,122,255:40,0 chr2 27682203 . C . PASS END=27682389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,108,1673:0,108,255:40,0 chr2 27682576 . C . PASS END=27682696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,106,1588:0,106,255:40,1 chr2 27683882 . C . PASS END=27683960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,116,1671:0,116,255:40,0 chr2 27683963 . G . PASS END=27683963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 27684131 . C . PASS END=27684131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 27684136 . C . PASS END=27684138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27684139 . T . PASS END=27684139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27684140 . T . PASS END=27684140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 27684141 . C . PASS END=27684166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,997:0,87,255:32,0 chr2 27684167 . G . PASS END=27684167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr2 27684168 . C . PASS END=27684168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 27684169 . A . PASS END=27684169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 27684170 . G . PASS END=27684377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,87,255:40,0 chr2 27684378 . G . PASS END=27684378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 27684379 . G . PASS END=27684379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27684380 . T . PASS END=27684384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:23,0 chr2 27684626 . C . PASS END=27684696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:33:0,90,1152:0,99,255:40,0 chr2 27684697 . C . PASS END=27684703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,108,1620:0,117,255:38,0 chr2 27685568 . C . PASS END=27685594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,141,255:40,0 chr2 27685595 . T . PASS END=27685595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:76:59:0,76,1414:0,76,255:40,0 chr2 27685596 . T . PASS END=27685660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,102,1530:0,121,255:40,0 chr2 27685964 . A . PASS END=27686048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,131,255:40,0 chr2 27686136 . A . PASS END=27686137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,117,1755:0,141,255:39,0 chr2 27688268 . T . PASS END=27688268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 27688278 . C . PASS END=27688385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1257:0,89,255:40,0 chr2 27688613 . C . PASS END=27688638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,119,1490:0,119,255:40,0 chr2 27688639 . T . PASS END=27688724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:36:0,84,1260:0,94,255:40,0 chr2 27688725 . C . PASS END=27688731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr2 27688732 . C . PASS END=27688733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 27688734 . G . PASS END=27688739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,933:0,67,255:25,0 chr2 27688740 . T . PASS END=27688745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:25:0,57,855:0,65,255:19,0 chr2 27688746 . C . PASS END=27688749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,72,255:17,0 chr2 27693795 . C . PASS END=27693948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,109,1665:0,109,255:40,1 chr2 27693949 . T . PASS END=27693949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1406:0,77,255:36,0 chr2 27693950 . C . PASS END=27693963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1419:0,104,255:39,0 chr2 27695042 . T . PASS END=27695227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:34:0,84,1260:0,98,255:40,0 chr2 27695228 . C . PASS END=27695229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:33:0,68,1080:0,68,255:24,0 chr2 27699508 . C . PASS END=27699593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,173,255:40,0 chr2 27700084 . C . PASS END=27700187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,120,1800:0,120,255:40,0 chr2 27700426 . A . PASS END=27700479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:52:0,120,1800:0,123,255:40,0 chr2 27700862 . C . PASS END=27701023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:36:0,84,1350:0,84,255:40,0 chr2 27702376 . C . PASS END=27702471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:36:0,96,1440:0,105,255:40,0 chr2 27702893 . C . PASS END=27702996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1205:0,86,255:40,0 chr2 27702997 . T . PASS END=27703012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr2 27703013 . A . PASS END=27703013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 27703014 . A . PASS END=27703016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27703913 . C . PASS END=27704095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1141:0,93,255:40,0 chr2 27704096 . T . PASS END=27704104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,900:0,81,255:25,0 chr2 27704105 . C . PASS END=27704122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:18,0 chr2 27704123 . T . PASS END=27704123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 27704124 . T . PASS END=27704127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 27706156 . C . PASS END=27706243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,120,1800:0,140,255:40,0 chr2 27706447 . T . PASS END=27706526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,134,255:40,0 chr2 27706739 . C . PASS END=27706804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,142,255:40,0 chr2 27706929 . C . PASS END=27706973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,172,255:40,0 chr2 27707094 . C . PASS END=27707133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,158,255:40,0 chr2 27707885 . C . PASS END=27707962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:44:0,120,1800:0,122,255:40,0 chr2 27707963 . G . PASS END=27707997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,99,1485:0,121,255:40,0 chr2 27708227 . C . PASS END=27708227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,671:0,31,255:21,0 chr2 27708228 . T . PASS END=27708240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:25,0 chr2 27708241 . G . PASS END=27708241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 27708242 . T . PASS END=27708242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:26,0 chr2 27708243 . T . PASS END=27708248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 27708249 . G . PASS END=27708250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 27708251 . G . PASS END=27708253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27708254 . T . PASS END=27708256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr2 27708257 . A . PASS END=27708344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1003:0,83,255:36,0 chr2 27708345 . A . PASS END=27708365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,65,255:26,0 chr2 27708366 . C . PASS END=27708370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr2 27712482 . C . PASS END=27712520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1218:0,85,255:40,0 chr2 27715263 . C . PASS END=27715345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,144,255:40,0 chr2 27715533 . C . PASS END=27715657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,102,1436:0,104,255:40,0 chr2 27716256 . C . PASS END=27716345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:38:0,97,1333:0,97,255:40,0 chr2 27716797 . C . PASS END=27716797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27716798 . T . PASS END=27716802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27716803 . T . PASS END=27716812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:25,0 chr2 27716813 . T . PASS END=27716813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 27716814 . G . PASS END=27716858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,873:0,62,255:26,0 chr2 27716859 . G . PASS END=27716862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,779:0,39,255:23,0 chr2 27716863 . C . PASS END=27716863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 27716864 . T . PASS END=27716865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 27716866 . G . PASS END=27716879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,930:0,72,255:24,0 chr2 27716880 . C . PASS END=27716905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,630:0,40,255:19,0 chr2 27716906 . T . PASS END=27716906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr2 27716907 . G . PASS END=27716907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 27716908 . T . PASS END=27716908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr2 27716909 . G . PASS END=27716942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:12,0 chr2 27716943 . C . PASS END=27716962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:7:0,21,263:0,21,255:8,0 chr2 27716963 . C . PASS END=27716995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 27716996 . C . PASS END=27717001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 27717218 . T . PASS END=27717228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr2 27717229 . T . PASS END=27717229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 27717230 . G . PASS END=27717233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 27717234 . T . PASS END=27717245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:31,0 chr2 27717246 . A . PASS END=27717246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr2 27717247 . T . PASS END=27717333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:32:0,85,1210:0,85,255:40,0 chr2 27717414 . C . PASS END=27717414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 27717415 . T . PASS END=27717422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 27717423 . C . PASS END=27717426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 27717427 . G . PASS END=27717428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27717429 . C . PASS END=27717516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,552:0,40,255:19,0 chr2 27717517 . G . PASS END=27717519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:35:15:0,35,540:0,35,255:13,0 chr2 27717520 . G . PASS END=27717545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 27717546 . T . PASS END=27717546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27719772 . A . PASS END=27719831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,112,1446:0,112,255:40,0 chr2 27720111 . T . PASS END=27720266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:38:0,96,1426:0,101,255:40,0 chr2 27720429 . A . PASS END=27720497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:48:0,120,1800:0,144,255:40,0 chr2 27721122 . G . PASS END=27721125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,969:0,75,255:26,0 chr2 27721126 . C . PASS END=27721134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 27721135 . G . PASS END=27721135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 27721136 . G . PASS END=27721146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:28,0 chr2 27721147 . T . PASS END=27721147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27721148 . G . PASS END=27721154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 27721155 . G . PASS END=27721156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27721157 . G . PASS END=27721158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 27721159 . G . PASS END=27721159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr2 27721160 . C . PASS END=27721163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 27721164 . T . PASS END=27721164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr2 27721165 . C . PASS END=27721174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:29,0 chr2 27721175 . G . PASS END=27721175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 27721176 . G . PASS END=27721177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 27721178 . A . PASS END=27721178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 27721179 . T . PASS END=27721184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 27721185 . A . PASS END=27721190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr2 27721591 . G . PASS END=27721664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,119,1800:0,119,255:40,0 chr2 27722009 . G . PASS END=27722075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,106,1413:0,106,255:40,0 chr2 27722264 . G . PASS END=27722317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:64:0,120,1800:0,157,255:40,0 chr2 27724002 . G . PASS END=27724006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:26,0 chr2 27724007 . C . PASS END=27724014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:29,0 chr2 27724015 . C . PASS END=27724015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:26,0 chr2 27724016 . A . PASS END=27724016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 27724017 . G . PASS END=27724096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:31:0,86,1241:0,86,255:40,0 chr2 27724557 . G . PASS END=27724680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1080:0,80,255:40,0 chr2 27726381 . A . PASS END=27726486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:44:0,101,1582:0,101,255:40,0 chr2 27728585 . C . PASS END=27728588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr2 27728589 . A . PASS END=27728589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:34,0 chr2 27728590 . G . PASS END=27728703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,93,255:40,0 chr2 27729348 . A . PASS END=27729442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:39:0,82,1344:0,82,255:40,0 chr2 27729443 . C . PASS END=27729446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,111,1521:0,113,255:40,0 chr2 27729655 . T . PASS END=27729752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,105,1544:0,105,255:40,0 chr2 27730102 . A . PASS END=27730178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,115,1800:0,115,255:40,0 chr2 27730548 . G . PASS END=27730553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1288:0,105,255:37,0 chr2 27730554 . C . PASS END=27730554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:37,0 chr2 27730555 . A . PASS END=27730594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1269:0,81,255:40,0 chr2 27730595 . T . PASS END=27730595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1337:0,68,255:37,0 chr2 27730596 . C . PASS END=27730619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1226:0,87,255:39,0 chr2 27730620 . G . PASS END=27730620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:32,0 chr2 27730621 . T . PASS END=27730626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,108,255:33,0 chr2 27730627 . T . PASS END=27730627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1205:0,64,255:30,0 chr2 27730628 . C . PASS END=27730636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1103:0,82,255:32,0 chr2 27730637 . C . PASS END=27730638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1094:0,60,255:30,0 chr2 27730639 . T . PASS END=27730641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1186:0,86,255:31,0 chr2 27730642 . A . PASS END=27730642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1083:0,63,255:31,0 chr2 27730643 . T . PASS END=27730644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1053:0,85,255:31,0 chr2 27730844 . A . PASS END=27730902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:37:0,94,1288:0,94,255:40,0 chr2 27730903 . C . PASS END=27730939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:43:0,105,1575:0,122,255:40,0 chr2 27730940 . T C, 182.43 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,21,0:0,24,0:132:220,135,0,1712,135,1712:255,138,0:0,0:1.8243e+02,1.3243e+02,0.0000e+00,4.5000e+02,1.6720e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,16:0,0,19,26 chr2 27730941 . G . PASS END=27730941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:43:0,91,1558:0,91,255:40,0 chr2 27731035 . A . PASS END=27731118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,102,1490:0,102,255:40,0 chr2 27741655 . A . PASS END=27741667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:31,0 chr2 27741668 . A . PASS END=27741668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 27741669 . G . PASS END=27741804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:34:0,88,1075:0,88,255:40,0 chr2 27745327 . C . PASS END=27745461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:95:36:0,95,1348:0,95,255:40,0 chr2 27746136 . G . PASS END=27746140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 27746141 . A . PASS END=27746156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:24,0 chr2 27746157 . A . PASS END=27746157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 27746158 . G . PASS END=27746160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,890:0,72,255:25,0 chr2 27746161 . T . PASS END=27746168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1055:0,84,255:31,0 chr2 27746169 . C . PASS END=27746169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 27746170 . G . PASS END=27746263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:31:0,86,1140:0,86,255:40,0 chr2 27746264 . C . PASS END=27746264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:30,0 chr2 27746265 . A . PASS END=27746268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,89,255:29,0 chr2 27746269 . C . PASS END=27746269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:28,0 chr2 27746270 . G . PASS END=27746282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 27746283 . A . PASS END=27746304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr2 27746305 . G . PASS END=27746306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 27760294 . A . PASS END=27760296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 27760297 . G . PASS END=27760297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr2 27760298 . C . PASS END=27760299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27760300 . C . PASS END=27760300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 27760301 . C . PASS END=27760301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27760302 . A . PASS END=27760302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr2 27760303 . A . PASS END=27760383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:35,0 chr2 27760384 . C . PASS END=27760384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 27760385 . T . PASS END=27760433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,83,255:36,0 chr2 27760434 . A . PASS END=27760437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1035:0,99,255:26,0 chr2 27788204 . A . PASS END=27788282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,176,255:40,0 chr2 27788911 . A . PASS END=27788965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,163,255:40,0 chr2 27789156 . T . PASS END=27789182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1402:0,111,255:38,0 chr2 27789183 . C . PASS END=27789183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr2 27789184 . C . PASS END=27789227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:34:0,85,1180:0,85,255:39,0 chr2 27789228 . C . PASS END=27789228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1142:0,71,255:31,0 chr2 27789229 . T . PASS END=27789251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1170:0,83,255:33,0 chr2 27789602 . A . PASS END=27789823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:34:0,89,1263:0,89,255:40,0 chr2 27789824 . T . PASS END=27789860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1654:0,120,255:40,0 chr2 27789861 . T A, 48.81 PASS DP=57;MQ=250.00;MQRankSum=6.425;ReadPosRankSum=2.983;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,25,0:0.439,0.000:57:17,13,0:15,12,0:47:84,0,50,857,1042,1899:255,0,255:30,0:4.8805e+01,7.8953e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,19,13,12:16,16,9,16 chr2 27789862 . T . PASS END=27789898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,144,255:40,0 chr2 27789899 . C . PASS END=27791901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:37:0,80,1251:0,80,255:40,1 chr2 27791902 . A . PASS END=27791902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:34,0 chr2 27791903 . A . PASS END=27792285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:38:0,80,1270:0,80,255:40,0 chr2 27792286 . C . PASS END=27792322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,137,255:40,0 chr2 27792323 . A C, 49.45 PASS DP=48;MQ=250.00;MQRankSum=5.907;ReadPosRankSum=3.093;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,22,0:0.458,0.000:48:14,15,0:12,7,0:48:84,0,50,757,872,1628:255,0,255:24,0:4.9445e+01,7.1187e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,9,13:15,11,8,14 chr2 27792324 . T . PASS END=27792360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,106,1615:0,106,255:40,0 chr2 27792361 . C . PASS END=27793064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:38:0,85,1396:0,85,255:40,0 chr2 27793065 . T . PASS END=27793065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:33,0 chr2 27793066 . C . PASS END=27793071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1363:0,95,255:35,0 chr2 27793072 . A . PASS END=27793072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1147:0,56,255:33,0 chr2 27793073 . T . PASS END=27794112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:38:0,90,1460:0,90,255:40,0 chr2 27794113 . C . PASS END=27794149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:42:0,88,1488:0,88,255:40,0 chr2 27794150 . C G, 48.22 PASS DP=42;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=3.851;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,18,0:0.429,0.000:42:10,6,0:14,12,0:47:83,0,50,636,857,1493:255,0,255:22,0:4.8218e+01,8.7237e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,8,10:10,14,10,8 chr2 27794151 . T . PASS END=27794199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:37:0,96,1418:0,101,255:39,0 chr2 27794200 . G . PASS END=27794200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:35,0 chr2 27794201 . C . PASS END=27794232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1329:0,81,255:38,0 chr2 27794233 . C T, 46.02 PASS DP=38;MQ=250.00;MQRankSum=5.137;ReadPosRankSum=1.463;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,15,0:0.395,0.000:38:10,7,0:13,8,0:45:81,0,50,479,794,1273:255,0,255:23,0:4.6019e+01,1.3047e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,11,4:13,10,7,8 chr2 27794234 . G . PASS END=27794270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1425:0,90,255:40,0 chr2 27794271 . C . PASS END=27794531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:33:0,84,1260:0,89,255:40,0 chr2 27794532 . G . PASS END=27794537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:34:0,75,1125:0,88,255:26,0 chr2 27794538 . C . PASS END=27794572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1163:0,90,255:32,0 chr2 27794573 . T . PASS END=27794573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1039:0,41,255:29,0 chr2 27794574 . A . PASS END=27794699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:31:0,83,1105:0,83,255:40,0 chr2 27794700 . G . PASS END=27794700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:53:47:0,53,1504:0,53,255:40,0 chr2 27794701 . T . PASS END=27794862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:94:40:0,94,1360:0,94,255:40,0 chr2 27794863 . A . PASS END=27794863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1311:0,51,255:34,0 chr2 27794864 . T . PASS END=27795041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:37:0,93,1258:0,93,255:40,0 chr2 27795042 . T . PASS END=27795042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1091:0,55,255:32,0 chr2 27795043 . T . PASS END=27795095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1114:0,86,255:37,0 chr2 27795096 . C . PASS END=27795098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr2 27795099 . C . PASS END=27795109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:29,0 chr2 27795110 . A . PASS END=27795110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,963:0,43,255:26,0 chr2 27795111 . G . PASS END=27795111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27795112 . T . PASS END=27795112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:26,0 chr2 27795113 . G . PASS END=27795120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1131:0,80,255:29,0 chr2 27795121 . T . PASS END=27795121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 27795122 . G . PASS END=27795125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27795126 . T . PASS END=27795126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr2 27795127 . C . PASS END=27795132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 27795133 . T . PASS END=27795133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr2 27795134 . A . PASS END=27795140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 27795141 . C . PASS END=27795141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 27795142 . A . PASS END=27795146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 27795147 . C . PASS END=27795150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27795151 . G . PASS END=27795152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 27795153 . G . PASS END=27795153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27795154 . T . PASS END=27795154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27795155 . G . PASS END=27795155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 27795156 . A . PASS END=27795159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27795160 . T . PASS END=27795177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,872:0,65,255:26,0 chr2 27795178 . A . PASS END=27795179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27795180 . C . PASS END=27795203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,931:0,64,255:26,0 chr2 27795204 . G . PASS END=27795204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 27795205 . T . PASS END=27795205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 27795206 . T . PASS END=27795210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27795211 . G . PASS END=27795211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:27,0 chr2 27795212 . G . PASS END=27795214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 27795215 . A . PASS END=27795215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 27795216 . A . PASS END=27795218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 27795219 . A . PASS END=27795220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1084:0,74,255:27,0 chr2 27795221 . A . PASS END=27795223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 27795224 . T . PASS END=27795226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr2 27795227 . G . PASS END=27795230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 27795231 . C . PASS END=27795232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 27795233 . A . PASS END=27795242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 27795243 . T . PASS END=27795243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:27,0 chr2 27795244 . C . PASS END=27795244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 27795245 . T . PASS END=27795246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr2 27795247 . T . PASS END=27795247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27795248 . A . PASS END=27795248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27795249 . G . PASS END=27795260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:33,0 chr2 27795261 . G . PASS END=27795261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1186:0,58,255:31,0 chr2 27795262 . G . PASS END=27795262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:33,0 chr2 27795263 . G . PASS END=27795288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:36:0,94,1207:0,94,255:40,0 chr2 27795289 . C . PASS END=27795289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:37,0 chr2 27795290 . A . PASS END=27795386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:40:0,88,1322:0,88,255:40,0 chr2 27795387 . G . PASS END=27795387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:38,0 chr2 27795388 . G . PASS END=27795524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:40:0,87,1257:0,87,255:40,0 chr2 27795525 . A . PASS END=27795525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1389:0,60,255:31,0 chr2 27795526 . C . PASS END=27795528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:41:0,90,1366:0,90,255:33,0 chr2 27795529 . G . PASS END=27795529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1426:0,79,255:29,0 chr2 27795530 . T . PASS END=27795531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:30,0 chr2 27795532 . T . PASS END=27795532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1290:0,70,255:28,0 chr2 27795533 . G . PASS END=27795542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1215:0,101,255:31,0 chr2 27795543 . C . PASS END=27795543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1216:0,61,255:28,0 chr2 27795544 . A . PASS END=27795551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1255:0,89,255:31,0 chr2 27795552 . C . PASS END=27795552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:30,0 chr2 27795553 . C . PASS END=27795577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1211:0,81,255:37,0 chr2 27795578 . A . PASS END=27795578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1243:0,67,255:35,0 chr2 27795579 . A . PASS END=27795941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:37:0,81,1173:0,81,255:40,0 chr2 27795942 . T . PASS END=27795942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1312:0,71,255:37,0 chr2 27795943 . C . PASS END=27796030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1103:0,80,255:39,0 chr2 27796031 . A . PASS END=27796031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1125:0,68,255:31,0 chr2 27796032 . G . PASS END=27796048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:35,0 chr2 27796049 . G . PASS END=27796049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr2 27796050 . T . PASS END=27796100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,85,255:40,0 chr2 27796101 . G . PASS END=27796101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:33,0 chr2 27796102 . G . PASS END=27796240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:35:0,85,1257:0,85,255:40,0 chr2 27796241 . A . PASS END=27796241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:31,0 chr2 27796242 . G . PASS END=27796488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1227:0,92,255:40,0 chr2 27796489 . G . PASS END=27796525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,116,1612:0,116,255:40,0 chr2 27796526 . C T, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.699;ReadPosRankSum=3.072;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,25,0:0.556,0.000:45:13,8,0:7,17,0:48:85,0,49,836,715,1552:255,0,255:18,0:5.0000e+01,7.0410e-05,5.2082e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,12,13:10,10,15,10 chr2 27796527 . T . PASS END=27796563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:44:0,97,1577:0,97,255:40,0 chr2 27796564 . C . PASS END=27796889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,107,1800:0,107,255:40,1 chr2 27796890 . A . PASS END=27796926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,179,255:40,0 chr2 27796927 . A G, 50.00 PASS DP=70;MQ=250.00;MQRankSum=7.162;ReadPosRankSum=3.661;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,38,0:0.543,0.000:70:21,18,0:11,20,0:48:85,0,49,1348,1132,2481:255,0,255:27,0:5.0000e+01,6.8598e-05,5.2358e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,15,21,17:20,12,21,17 chr2 27796928 . T . PASS END=27796964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,179,255:40,0 chr2 27796965 . A . PASS END=27797828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:33:0,81,1200:0,81,255:40,0 chr2 27797829 . G . PASS END=27797829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27797830 . A . PASS END=27797835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,82,255:28,0 chr2 27797836 . A . PASS END=27797836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:27,0 chr2 27797837 . A . PASS END=27797837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr2 27797838 . T . PASS END=27797838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr2 27797839 . C . PASS END=27799254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1273:0,81,255:40,0 chr2 27799255 . A . PASS END=27799255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1355:0,71,255:32,0 chr2 27799256 . G . PASS END=27799722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:37:0,83,1336:0,83,255:40,0 chr2 27799723 . C . PASS END=27799723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1312:0,62,255:34,0 chr2 27799724 . A . PASS END=27799878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:35:0,85,1311:0,85,255:40,0 chr2 27799879 . C . PASS END=27799879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:30,0 chr2 27799880 . A . PASS END=27799923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1142:0,88,255:36,0 chr2 27799924 . A . PASS END=27799924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1141:0,72,255:33,0 chr2 27799925 . A . PASS END=27799926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1357:0,105,255:36,0 chr2 27799927 . T . PASS END=27799927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr2 27799928 . G . PASS END=27800262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1215:0,80,255:40,0 chr2 27800263 . A . PASS END=27800263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr2 27800264 . A . PASS END=27801365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:31:0,84,1219:0,84,255:40,0 chr2 27801366 . C . PASS END=27801402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,131,255:40,0 chr2 27801403 . C G, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.855;ReadPosRankSum=2.267;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,34,0:0.531,0.000:64:14,24,0:16,10,0:48:85,0,50,1157,1073,2230:255,0,255:24,0:5.0000e+01,6.6527e-05,5.2728e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,16,18:10,20,18,16:27801403 chr2 27801404 . T . PASS END=27801417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,140,255:40,0 chr2 27801418 . C A, 49.96 PASS DP=53;MQ=250.00;MQRankSum=6.236;ReadPosRankSum=4.012;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:27,26,0:0.491,0.000:53:12,19,0:15,7,0:48:85,0,50,864,929,1793:255,0,255:26,0:4.9957e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,13,13:10,17,12,14:27801403 chr2 27801419 . A . PASS END=27801455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,134,255:40,0 chr2 27801456 . C . PASS END=27801881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1141:0,81,255:40,0 chr2 27801882 . A . PASS END=27801882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1072:0,47,255:29,0 chr2 27801883 . T . PASS END=27801918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1219:0,86,255:35,0 chr2 27801919 . A . PASS END=27801919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1120:0,66,255:32,0 chr2 27801920 . G . PASS END=27801924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,88,255:32,0 chr2 27801925 . A . PASS END=27801925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:30,0 chr2 27801926 . G . PASS END=27802767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:32:0,82,969:0,82,255:40,0 chr2 27802768 . T . PASS END=27802804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,117,1755:0,125,255:40,0 chr2 27802805 . A G, 46.99 PASS DP=51;MQ=250.00;MQRankSum=6.019;ReadPosRankSum=2.306;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,21,0:0.412,0.000:51:16,13,0:14,8,0:46:82,0,50,693,1065,1758:255,0,255:27,0:4.6994e+01,1.0846e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,11,10:14,16,11,10 chr2 27802806 . C . PASS END=27802842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,119,1637:0,119,255:40,0 chr2 27802843 . A . PASS END=27803086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:32:0,83,1164:0,83,255:40,0 chr2 27803087 . T . PASS END=27803087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1289:0,68,255:40,0 chr2 27803088 . T . PASS END=27803466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1208:0,81,255:40,0 chr2 27803467 . A . PASS END=27803467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 27803468 . A . PASS END=27803504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1072:0,82,255:33,0 chr2 27803505 . A . PASS END=27803505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:25,0 chr2 27803506 . G . PASS END=27803506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr2 27803507 . C . PASS END=27803507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1181:0,66,255:28,0 chr2 27803508 . C . PASS END=27803511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1305:0,92,255:30,0 chr2 27803512 . A . PASS END=27803512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1109:0,58,255:27,0 chr2 27803513 . G . PASS END=27803534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1239:0,89,255:35,0 chr2 27803535 . A . PASS END=27803535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:33,0 chr2 27803536 . G . PASS END=27803676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1251:0,84,255:40,0 chr2 27803677 . A . PASS END=27803677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:26,0 chr2 27803678 . C . PASS END=27803718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:31:0,81,1194:0,86,255:36,0 chr2 27803719 . T . PASS END=27803719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1246:0,62,255:32,0 chr2 27803720 . A . PASS END=27804208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:39:0,83,1345:0,83,255:40,0 chr2 27804209 . C . PASS END=27804209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1518:0,72,255:38,0 chr2 27804210 . T . PASS END=27804221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1551:0,105,255:40,0 chr2 27804222 . A . PASS END=27804222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1418:0,79,255:39,0 chr2 27804223 . G . PASS END=27804225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:43:0,99,1535:0,99,255:40,0 chr2 27804226 . A . PASS END=27804226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:63:43:0,63,1371:0,63,255:37,0 chr2 27804227 . A . PASS END=27804228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1466:0,96,255:40,0 chr2 27804229 . A . PASS END=27804229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:1:43:0,1,1083:0,1,255:37,0 chr2 27804230 . C . PASS END=27804234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:43:0,82,1413:0,82,255:40,0 chr2 27804235 . C . PASS END=27804235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:59:43:0,59,1423:0,59,255:40,0 chr2 27804236 . C . PASS END=27804241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:43:0,96,1533:0,96,255:38,0 chr2 27804242 . T . PASS END=27804242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:52:44:0,52,1410:0,52,255:35,0 chr2 27804243 . T . PASS END=27804244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,111,1665:0,132,255:37,0 chr2 27804245 . T . PASS END=27804245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1390:0,68,255:36,0 chr2 27804246 . G . PASS END=27804250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,106,1375:0,106,255:37,0 chr2 27804251 . A . PASS END=27804251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1179:0,64,255:34,0 chr2 27804252 . A . PASS END=27804254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1526:0,107,255:38,0 chr2 27804255 . T . PASS END=27804255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1420:0,76,255:34,0 chr2 27804256 . G . PASS END=27804394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:39:0,84,1389:0,84,255:40,0 chr2 27804395 . A . PASS END=27804431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,4:68:99:63:0,120,1800:0,137,255:40,0 chr2 27804432 . T C, 49.66 PASS DP=57;MQ=195.52;MQRankSum=-2.637;ReadPosRankSum=4.148;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,26,0:0.464,0.000:56:14,15,0:16,11,0:48:84,0,50,913,999,1912:255,0,255:28,0:4.9660e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,12,12,14:16,14,17,9 chr2 27804433 . C . PASS END=27804460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:57:0,80,1629:0,80,255:40,0 chr2 27804461 . C . PASS END=27804462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:62:63:0,62,1986:0,62,255:40,0 chr2 27804463 . A . PASS END=27804469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,3:58:99:55:0,102,1800:0,102,255:40,0 chr2 27804470 . C . PASS END=27804484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,113,1800:0,113,255:40,0 chr2 27804485 . A . PASS END=27804485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:32:56:0,32,1554:0,32,255:40,0 chr2 27804486 . G . PASS END=27804526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:83:48:0,83,1501:0,83,255:40,0 chr2 27804527 . T . PASS END=27804527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:62:50:0,62,1582:0,62,255:38,0 chr2 27804528 . C . PASS END=27804533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,111,1740:0,111,255:40,0 chr2 27804534 . C . PASS END=27804534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:64:50:0,64,1698:0,64,255:40,0 chr2 27804535 . A . PASS END=27804547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:95:48:0,95,1625:0,95,255:40,0 chr2 27804548 . T . PASS END=27804548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:53:51:0,53,1466:0,53,255:40,0 chr2 27804549 . G . PASS END=27804713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,3:80:99:51:0,100,1654:0,100,255:40,0 chr2 27804714 . T . PASS END=27804714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,10:90:68:90:0,68,2599:0,68,255:40,0 chr2 27804715 . G . PASS END=27804990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:46:0,81,1541:0,81,255:40,0 chr2 27804991 . A . PASS END=27804991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1402:0,76,255:36,0 chr2 27804992 . G . PASS END=27805008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:37:0,99,1485:0,99,255:39,0 chr2 27805009 . T . PASS END=27805010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1162:0,61,255:30,0 chr2 27805011 . G . PASS END=27805018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1233:0,94,255:33,0 chr2 27805019 . C . PASS END=27805019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr2 27805020 . C . PASS END=27805034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1166:0,83,255:31,0 chr2 27805035 . G . PASS END=27805035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:29,0 chr2 27805036 . A . PASS END=27805043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:30,0 chr2 27805044 . G . PASS END=27805046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:29,0 chr2 27805047 . C . PASS END=27805047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,92,255:28,0 chr2 27805048 . A . PASS END=27805048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1103:0,47,255:28,0 chr2 27805049 . C . PASS END=27805051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1180:0,61,255:29,0 chr2 27805052 . T . PASS END=27805052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 27805053 . T . PASS END=27805053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,976:0,29,255:25,0 chr2 27805054 . C . PASS END=27805054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 27805055 . C . PASS END=27805055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 27805056 . T . PASS END=27805057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 27805058 . T . PASS END=27805059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 27805060 . G . PASS END=27805060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,937:0,18,255:25,0 chr2 27805061 . G . PASS END=27805062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 27805063 . A . PASS END=27805063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,938:0,37,255:24,0 chr2 27805064 . A . PASS END=27805065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27805066 . C . PASS END=27805066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:24,0 chr2 27805067 . C . PASS END=27805067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 27805068 . T . PASS END=27805068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,876:0,37,255:22,0 chr2 27805069 . G . PASS END=27805069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:24,0 chr2 27805070 . T . PASS END=27805071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr2 27805072 . A . PASS END=27805072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,955:0,40,255:23,0 chr2 27805073 . C . PASS END=27805076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1030:0,68,255:26,0 chr2 27805077 . C . PASS END=27805087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr2 27805088 . A . PASS END=27805088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:27,0 chr2 27805089 . A . PASS END=27805090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 27805091 . C . PASS END=27805091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:30,0 chr2 27805092 . C . PASS END=27805137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:85:33:0,85,1158:0,85,255:36,0 chr2 27805138 . G . PASS END=27805138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr2 27805139 . C . PASS END=27805188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1194:0,86,255:36,0 chr2 27805189 . C . PASS END=27805189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:28,0 chr2 27805190 . A . PASS END=27805370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1155:0,80,255:40,0 chr2 27805371 . T . PASS END=27805371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1396:0,76,255:33,0 chr2 27805372 . G . PASS END=27805392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:34,0 chr2 27805393 . G . PASS END=27805394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27805980 . A . PASS END=27806009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:47:0,85,1417:0,85,255:40,0 chr2 27806525 . A . PASS END=27806583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:52:0,120,1800:0,135,255:40,0 chr2 27820934 . T . PASS END=27820940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:25,0 chr2 27820941 . A . PASS END=27820954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1141:0,90,255:34,0 chr2 27820955 . A . PASS END=27820955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:33,0 chr2 27820956 . A . PASS END=27821121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:34:0,90,1122:0,91,255:40,0 chr2 27822450 . G . PASS END=27822545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,114,1710:0,122,255:40,0 chr2 27822837 . G . PASS END=27822920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:33:0,82,1089:0,82,255:40,0 chr2 27823558 . G . PASS END=27823560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 27823561 . G . PASS END=27823582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:33,0 chr2 27823583 . A . PASS END=27823583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:32,0 chr2 27823584 . G . PASS END=27823682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1134:0,83,255:40,0 chr2 27824223 . G . PASS END=27824303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:98:68:0,98,1800:0,98,255:40,2 chr2 27824304 . A . PASS END=27824309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,3:67:99:66:0,120,1800:0,150,255:40,0 chr2 27825330 . C . PASS END=27825428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:39:0,90,1348:0,90,255:40,0 chr2 27826007 . A . PASS END=27826174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:36:0,95,1349:0,95,255:40,0 chr2 27830712 . A . PASS END=27830725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,820:0,62,255:26,0 chr2 27830726 . A . PASS END=27830726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:22,0 chr2 27830727 . G . PASS END=27830732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1022:0,68,255:26,0 chr2 27830733 . G . PASS END=27830835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,86,255:40,0 chr2 27830836 . C . PASS END=27830870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 27830871 . A . PASS END=27830882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:18,0 chr2 27830883 . G . PASS END=27830906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 27838035 . T . PASS END=27838057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,112,1800:0,112,255:40,0 chr2 27838058 . C A, 49.84 PASS DP=71;MQ=250.00;MQRankSum=7.234;ReadPosRankSum=3.240;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,34,0:0.479,0.000:71:13,15,0:24,19,0:48:85,0,50,1163,1295,2458:255,0,255:36,0:4.9843e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,22,19,15:17,20,14,20 chr2 27838059 . C . PASS END=27838095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,169,255:40,0 chr2 27838096 . C . PASS END=27838136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:49:0,120,1800:0,131,255:40,0 chr2 27839129 . G . PASS END=27839144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,116,1566:0,116,255:40,0 chr2 27839145 . A . PASS END=27839191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,128,255:40,0 chr2 27840340 . G . PASS END=27840438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,133,255:40,0 chr2 27844020 . G . PASS END=27844257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:97:35:0,97,1152:0,97,255:40,0 chr2 27844258 . A . PASS END=27844258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:35,0 chr2 27844259 . G . PASS END=27844276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1260:0,91,255:34,0 chr2 27844277 . G . PASS END=27844277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 27844278 . T . PASS END=27844284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 27844285 . A . PASS END=27844285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr2 27844286 . A . PASS END=27844287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27844288 . T . PASS END=27844305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,70,255:25,0 chr2 27844306 . A . PASS END=27844306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:20,0 chr2 27844307 . T . PASS END=27844311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 27844312 . A . PASS END=27844316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,751:0,47,255:19,0 chr2 27844317 . G . PASS END=27844318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27844319 . A . PASS END=27844320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 27844321 . G . PASS END=27844321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,648:0,13,255:16,0 chr2 27844322 . G . PASS END=27844328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:18,0 chr2 27849830 . T . PASS END=27850033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1127:0,81,255:40,0 chr2 27850034 . C . PASS END=27850034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 27850035 . T . PASS END=27850046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1155:0,90,255:31,0 chr2 27850047 . A . PASS END=27850047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 27850048 . G . PASS END=27850054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 27850055 . C . PASS END=27850056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1102:0,77,255:27,0 chr2 27850057 . T . PASS END=27850057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:26,0 chr2 27850058 . C . PASS END=27850059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 27850060 . T . PASS END=27850060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:26,0 chr2 27850061 . G . PASS END=27850062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 27850063 . A . PASS END=27850076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1069:0,71,255:26,0 chr2 27850077 . C . PASS END=27850077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:24,0 chr2 27850078 . T . PASS END=27850137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,878:0,66,255:26,0 chr2 27850138 . C . PASS END=27850139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,672:0,52,255:20,0 chr2 27850140 . T . PASS END=27850148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 27850149 . A . PASS END=27850149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,725:0,30,255:21,0 chr2 27850150 . G . PASS END=27850153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 27850154 . T . PASS END=27850154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr2 27850155 . C . PASS END=27850165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,937:0,65,255:26,0 chr2 27850166 . C . PASS END=27850168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27850169 . T . PASS END=27850169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 27850170 . C . PASS END=27850177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 27850178 . C . PASS END=27850178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr2 27850179 . C . PASS END=27850408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:34:0,89,1302:0,89,255:40,0 chr2 27850409 . A . PASS END=27850409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1573:0,77,255:36,0 chr2 27850410 . A . PASS END=27850764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:33:0,81,1215:0,83,255:40,0 chr2 27850765 . T . PASS END=27850776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:28:0,66,1080:0,66,255:25,0 chr2 27850777 . C . PASS END=27850777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:24,0 chr2 27850778 . A . PASS END=27850784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 27851257 . T . PASS END=27851258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27851259 . G . PASS END=27851308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:26,0 chr2 27851309 . C . PASS END=27851360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,992:0,81,255:31,0 chr2 27851361 . C . PASS END=27851361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 27851362 . A . PASS END=27851386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:33,0 chr2 27851387 . T . PASS END=27851387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:27,0 chr2 27851388 . G . PASS END=27851405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:32,0 chr2 27851406 . A . PASS END=27851406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr2 27851407 . T . PASS END=27851418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:32,0 chr2 27851419 . T . PASS END=27851419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 27851420 . C . PASS END=27851432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1172:0,85,255:32,0 chr2 27851433 . T . PASS END=27851433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:26,0 chr2 27851434 . G . PASS END=27851436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 27851437 . G . PASS END=27851451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr2 27851452 . A . PASS END=27851452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:21,0 chr2 27851453 . G . PASS END=27851453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 27851454 . A . PASS END=27851454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 27851455 . C . PASS END=27851455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 27851456 . T . PASS END=27851456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 27851457 . G . PASS END=27851462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 27851463 . T . PASS END=27851463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 27851464 . G . PASS END=27851467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 27851468 . C . PASS END=27851476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 27851477 . C . PASS END=27851477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:17,0 chr2 27851478 . T . PASS END=27851480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,751:0,47,255:20,0 chr2 27851481 . T . PASS END=27851481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr2 27851482 . C . PASS END=27851494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,782:0,50,255:19,0 chr2 27851495 . G . PASS END=27851502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr2 27851503 . G . PASS END=27851503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 27851504 . C . PASS END=27851505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 27851506 . T . PASS END=27851508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27851509 . G . PASS END=27851510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 27851511 . T . PASS END=27851514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr2 27851515 . G . PASS END=27851516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 27851517 . A . PASS END=27851517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 27851518 . T . PASS END=27851518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27851519 . A . PASS END=27851519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 27851520 . A . PASS END=27851521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 27851522 . C . PASS END=27851533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 27851534 . G . PASS END=27851541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr2 27851542 . G . PASS END=27851542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:20,0 chr2 27851543 . T . PASS END=27851562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:22,0 chr2 27851563 . T . PASS END=27851563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 27851564 . G . PASS END=27851578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 27851579 . C . PASS END=27851579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 27851580 . A . PASS END=27851597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr2 27851598 . C . PASS END=27851598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 27851599 . T . PASS END=27851600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 27851601 . G . PASS END=27851629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:19,0 chr2 27851630 . T . PASS END=27851630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27851884 . A . PASS END=27851884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 27851885 . T . PASS END=27851885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:17,0 chr2 27851886 . G . PASS END=27851895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,698:0,54,255:18,0 chr2 27851896 . T . PASS END=27851896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,619:0,27,255:16,0 chr2 27851897 . A . PASS END=27851903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr2 27851904 . G . PASS END=27851908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:23,0 chr2 27851909 . G . PASS END=27851909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 27851910 . T . PASS END=27851911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 27851912 . G . PASS END=27851912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 27851913 . G . PASS END=27851919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:23:0,62,914:0,62,255:24,0 chr2 27851920 . A . PASS END=27851920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:24,0 chr2 27851921 . G . PASS END=27851924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 27851925 . G . PASS END=27851925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 27851926 . A . PASS END=27851936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,846:0,75,255:25,0 chr2 27851937 . C . PASS END=27851937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 27851938 . G . PASS END=27851945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,901:0,62,255:26,0 chr2 27851946 . C . PASS END=27851947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 27851948 . C . PASS END=27851969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr2 27851970 . T . PASS END=27851970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 27851971 . C . PASS END=27851975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 27851976 . G . PASS END=27851982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 27851983 . G . PASS END=27852007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,931:0,75,255:26,0 chr2 27852008 . C . PASS END=27852008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 27852009 . G . PASS END=27852036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,917:0,72,255:25,0 chr2 27852242 . G . PASS END=27852309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,195,255:40,0 chr2 27852726 . A . PASS END=27852727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 27852728 . G . PASS END=27852728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 27852729 . C . PASS END=27852739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:32,0 chr2 27852740 . C . PASS END=27852740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:31,0 chr2 27852741 . C . PASS END=27852819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:34:0,102,1243:0,102,255:40,0 chr2 27853894 . A . PASS END=27853933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,0:128:99:122:0,120,1800:0,255,255:40,0 chr2 27854701 . A . PASS END=27854767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:75:0,120,1800:0,181,255:40,0 chr2 27855500 . G . PASS END=27855537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,185,255:40,0 chr2 27857713 . A . PASS END=27857791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,128,255:40,0 chr2 27858007 . G . PASS END=27858029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,119,1621:0,119,255:40,0 chr2 27858030 . C . PASS END=27858101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:43:0,105,1575:0,114,255:40,0 chr2 27861077 . C . PASS END=27861122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:97:0,120,1800:0,255,255:40,0 chr2 27861752 . A . PASS END=27861879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:35:0,84,1195:0,87,255:40,0 chr2 27861880 . G . PASS END=27861898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr2 27862910 . G . PASS END=27862992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:38:0,90,1404:0,90,255:40,0 chr2 27864107 . G . PASS END=27864146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,225,255:40,0 chr2 27865296 . G . PASS END=27865386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:39:0,90,1350:0,104,255:40,0 chr2 27870703 . A . PASS END=27870810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:42:0,87,1305:0,125,255:40,0 chr2 27872982 . T . PASS END=27873067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:59:0,120,1800:0,142,255:40,0 chr2 27876352 . T . PASS END=27876358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr2 27876359 . T . PASS END=27876373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:24,0 chr2 27876374 . T . PASS END=27876374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 27876375 . T . PASS END=27876389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,886:0,61,255:26,0 chr2 27876390 . A . PASS END=27876614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:28:0,84,1055:0,84,255:40,0 chr2 27878232 . T . PASS END=27878270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:26,0 chr2 27878271 . G . PASS END=27878272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27878273 . A . PASS END=27878275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 27878276 . C . PASS END=27878284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 27878285 . T . PASS END=27878285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 27878286 . G . PASS END=27878391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1260:0,84,255:40,0 chr2 27878392 . C . PASS END=27878392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1371:0,70,255:36,0 chr2 27878393 . T . PASS END=27878418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,92,255:38,0 chr2 27878419 . C . PASS END=27878436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,61,255:25,0 chr2 27878437 . C . PASS END=27878445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 27878446 . T . PASS END=27878446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 27878447 . T . PASS END=27878447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 27878448 . C . PASS END=27878449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 27878450 . T . PASS END=27878469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,630:0,41,255:19,0 chr2 27880212 . C . PASS END=27880494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:31:0,85,1172:0,85,255:40,0 chr2 27880495 . C . PASS END=27880495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 27880496 . A . PASS END=27880520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 27880521 . A . PASS END=27880536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr2 27883851 . C . PASS END=27883864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:18,0 chr2 27883865 . C . PASS END=27883892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,886:0,64,255:26,0 chr2 27883893 . G . PASS END=27883905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,976:0,81,255:29,0 chr2 27883906 . T . PASS END=27883906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 27883907 . C . PASS END=27883923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 27883924 . G . PASS END=27883924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 27883925 . G . PASS END=27883944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 27883945 . G . PASS END=27883945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 27883946 . T . PASS END=27883949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 27883950 . C . PASS END=27883950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 27883951 . C . PASS END=27883966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1125:0,90,255:31,0 chr2 27883967 . A . PASS END=27883967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27883968 . G . PASS END=27883969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 27883970 . T . PASS END=27883970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 27883971 . T . PASS END=27883972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27883973 . A . PASS END=27883973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr2 27883974 . C . PASS END=27883981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr2 27883982 . A . PASS END=27883982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 27883983 . G . PASS END=27883993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 27883994 . T . PASS END=27883994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 27883995 . T . PASS END=27883999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 27884000 . C . PASS END=27884001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 27884002 . G . PASS END=27884003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 27884004 . T . PASS END=27884005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27884006 . C . PASS END=27884007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 27884008 . G . PASS END=27884008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 27884009 . A . PASS END=27884011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 27884012 . C . PASS END=27884012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:29,0 chr2 27884013 . T . PASS END=27884019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1180:0,85,255:32,0 chr2 27884020 . G . PASS END=27884020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr2 27884021 . A . PASS END=27884021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 27884022 . G . PASS END=27884022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1131:0,74,255:31,0 chr2 27884023 . C . PASS END=27884031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 27884032 . T . PASS END=27884032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr2 27884033 . A . PASS END=27884041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr2 27884042 . A . PASS END=27884043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 27884044 . G . PASS END=27884059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:29,0 chr2 27884060 . A . PASS END=27884060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1084:0,55,255:27,0 chr2 27884061 . A . PASS END=27884061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 27884062 . T . PASS END=27884062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:27,0 chr2 27884063 . C . PASS END=27884076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 27884077 . G . PASS END=27884077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 27884078 . G . PASS END=27884080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27884081 . G . PASS END=27884081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 27884082 . G . PASS END=27884086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 27884087 . A . PASS END=27884089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 27884090 . A . PASS END=27884092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 27884093 . T . PASS END=27884105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr2 27884106 . A . PASS END=27884106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:21,0 chr2 27884107 . T . PASS END=27884147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,726:0,66,255:24,0 chr2 27884148 . T . PASS END=27884149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 27884150 . G . PASS END=27884152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 27884153 . C . PASS END=27884161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:46:21:0,46,692:0,46,255:19,0 chr2 27884162 . G . PASS END=27884162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27884163 . T . PASS END=27884163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr2 27884164 . C . PASS END=27884166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 27884167 . G . PASS END=27884167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 27884168 . G . PASS END=27884180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 27884181 . C . PASS END=27884181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 27884182 . G . PASS END=27884193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,776:0,63,255:26,0 chr2 27884194 . G . PASS END=27884196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 27884197 . G . PASS END=27884197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 27884198 . C . PASS END=27884210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 27884211 . C . PASS END=27884234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr2 27884235 . A . PASS END=27884235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 27884236 . T . PASS END=27884244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 27884245 . C . PASS END=27884263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,690:0,54,255:18,0 chr2 27885046 . C . PASS END=27885059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:78:0,120,1800:0,218,255:40,0 chr2 27886620 . A . PASS END=27886620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 27886621 . T . PASS END=27886780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:30:0,82,1113:0,82,255:40,0 chr2 27886781 . G . PASS END=27886847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 27886848 . C . PASS END=27886848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 27886849 . C . PASS END=27886849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27886850 . A . PASS END=27886850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 27886851 . G . PASS END=27886854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 27886855 . T . PASS END=27886855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 27886856 . G . PASS END=27886872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 27886873 . C . PASS END=27886874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 27886875 . C . PASS END=27886901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 27886902 . T . PASS END=27886902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 27886903 . C . PASS END=27886905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,969:0,75,255:25,0 chr2 27886906 . A . PASS END=27886906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr2 27886907 . C . PASS END=27886946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 27886947 . G . PASS END=27886947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 27886948 . A . PASS END=27886948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 27886949 . C . PASS END=27886949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 27886950 . T . PASS END=27886968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:21,0 chr2 27886969 . A . PASS END=27886969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 27886970 . C . PASS END=27886970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27886971 . A . PASS END=27886972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27886973 . C . PASS END=27886974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27886975 . C . PASS END=27886975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 27886976 . T . PASS END=27886979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 27886980 . C . PASS END=27886982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 27886983 . C . PASS END=27886991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 27886992 . T . PASS END=27886992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:20,0 chr2 27886993 . G . PASS END=27886996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27886997 . T . PASS END=27887000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 27887001 . T . PASS END=27887001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr2 27887002 . T . PASS END=27887008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 27887009 . T . PASS END=27887009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27887010 . C . PASS END=27887010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27887011 . T . PASS END=27887026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr2 27887027 . G . PASS END=27887027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 27887028 . C . PASS END=27887028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 27887029 . G . PASS END=27887031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 27887032 . C . PASS END=27887032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 27887033 . C . PASS END=27887033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27887034 . C A, 50.00 PASS DP=14;MQ=250.00;MQRankSum=3.204;ReadPosRankSum=3.204;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,7,0:0.500,0.000:14:4,5,0:3,2,0:48:85,0,50,250,250,501:229,0,229:6,0:5.0000e+01,6.5233e-05,5.3000e+01,2.5030e+02,2.8518e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,3,2,5:3,4,2,5 chr2 27887035 . C . PASS END=27887039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 27887040 . G . PASS END=27887053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 27887054 . T . PASS END=27887054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 27887055 . G . PASS END=27887071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr2 27887072 . T . PASS END=27887077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 27887078 . C . PASS END=27887079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 27887080 . A . PASS END=27887087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr2 27887088 . C . PASS END=27887088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27887089 . C . PASS END=27887090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 27887091 . C . PASS END=27887098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 27887099 . T . PASS END=27887100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 27887101 . G . PASS END=27887145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,64,255:26,0 chr2 27887146 . C . PASS END=27887148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 27887149 . T . PASS END=27887149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:23,0 chr2 27887150 . C . PASS END=27887169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr2 27887170 . A . PASS END=27887170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,779:0,48,255:24,0 chr2 27887171 . A . PASS END=27887193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:26,0 chr2 27887194 . G . PASS END=27887195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 27887196 . A . PASS END=27887198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 27887199 . C . PASS END=27887203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27887204 . T . PASS END=27887252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,909:0,62,255:26,0 chr2 27887253 . G . PASS END=27887253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 27887254 . T . PASS END=27887255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 27887256 . C . PASS END=27887298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:32,0 chr2 27887299 . A . PASS END=27887300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:33,1 chr2 27887301 . G . PASS END=27887369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1213:0,86,255:38,0 chr2 27887370 . C . PASS END=27887370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr2 27887371 . C . PASS END=27887386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:34,0 chr2 27887387 . A . PASS END=27887388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 27887389 . T . PASS END=27887392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 27887393 . C . PASS END=27887395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:24,0 chr2 27887396 . T . PASS END=27887396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,896:0,37,255:22,0 chr2 27887397 . G . PASS END=27887404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,64,255:24,0 chr2 27887405 . T . PASS END=27887406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 27887407 . T . PASS END=27887416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 27887417 . A . PASS END=27887435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:18,0 chr2 27887436 . A . PASS END=27887444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 27887967 . G . PASS END=27887971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:35,0 chr2 27887972 . A . PASS END=27887972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr2 27887973 . G . PASS END=27888162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:38:0,83,1300:0,83,255:40,1 chr2 27890135 . G . PASS END=27890257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:31:0,89,1141:0,89,255:40,0 chr2 27891710 . G . PASS END=27891770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,150,255:40,0 chr2 27892115 . A . PASS END=27892123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1119:0,90,255:37,0 chr2 27892124 . G . PASS END=27892124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,0 chr2 27892125 . G . PASS END=27892254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:37:0,95,1333:0,95,255:40,0 chr2 27898399 . T . PASS END=27898559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:97:35:0,97,1201:0,97,255:40,0 chr2 27900162 . G . PASS END=27900231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:84:0,120,1800:0,222,255:40,0 chr2 27900605 . T . PASS END=27900785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:38:0,104,1444:0,104,255:40,0 chr2 27900786 . A . PASS END=27900786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1404:0,68,255:37,0 chr2 27900787 . A . PASS END=27900791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1485:0,104,255:39,0 chr2 27905115 . G . PASS END=27905226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:46:0,114,1793:0,114,255:40,0 chr2 27907904 . A . PASS END=27907908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:25,0 chr2 27907909 . A . PASS END=27907909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr2 27907910 . C . PASS END=27908141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:29:0,83,1072:0,83,255:40,0 chr2 27908142 . A . PASS END=27908142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1192:0,75,255:32,0 chr2 27908143 . T . PASS END=27908144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr2 27910801 . A . PASS END=27910801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 27910802 . A . PASS END=27910802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 27910803 . A . PASS END=27910812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1305:0,90,255:35,0 chr2 27910813 . A . PASS END=27910813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:32,0 chr2 27910814 . A . PASS END=27910887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:37:0,95,1333:0,95,255:40,0 chr2 27911567 . C . PASS END=27911634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:63:0,120,1800:0,120,255:40,0 chr2 27916552 . C . PASS END=27916620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:83:39:0,83,1147:0,83,255:40,0 chr2 27916621 . G . PASS END=27916621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:32,0 chr2 27917501 . G . PASS END=27917550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,3:80:99:73:0,120,1800:0,181,255:40,0 chr2 27939452 . A . PASS END=27939581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1195:0,93,255:40,0 chr2 27939582 . C . PASS END=27939599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,70,255:25,0 chr2 27939714 . A . PASS END=27939879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:32:0,80,1141:0,80,255:40,0 chr2 27939880 . T . PASS END=27939880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1001:0,63,255:29,0 chr2 27939881 . A . PASS END=27939885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr2 27940018 . C . PASS END=27940025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:25,0 chr2 27940026 . C . PASS END=27940038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1172:0,83,255:30,0 chr2 27940039 . T . PASS END=27940039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:28,0 chr2 27940040 . C . PASS END=27940040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 27940041 . T . PASS END=27940041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 27940042 . C . PASS END=27940047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:32,0 chr2 27940048 . T . PASS END=27940048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:31,0 chr2 27940049 . T . PASS END=27940049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1241:0,96,255:32,0 chr2 27940050 . T . PASS END=27940051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1048:0,65,255:31,0 chr2 27940052 . T . PASS END=27940062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1174:0,96,255:32,0 chr2 27940063 . A . PASS END=27940063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:27,0 chr2 27940064 . G . PASS END=27940088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1227:0,88,255:33,0 chr2 27940089 . T . PASS END=27940089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,936:0,52,255:28,0 chr2 27940090 . T . PASS END=27940206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1188:0,83,255:36,0 chr2 27940207 . A . PASS END=27940250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:27,0 chr2 27940251 . T . PASS END=27940251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 27940252 . T . PASS END=27940254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr2 27940255 . T . PASS END=27940255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr2 27940256 . A . PASS END=27940256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 27940257 . T . PASS END=27940279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 27950484 . C . PASS END=27950552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:40:0,111,1535:0,113,255:40,0 chr2 27961140 . C . PASS END=27961162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,531:0,48,255:19,0 chr2 27961163 . T . PASS END=27961165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 27961166 . C . PASS END=27961166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:19,0 chr2 27961167 . C . PASS END=27961167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 27961168 . C . PASS END=27961168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 27961169 . C . PASS END=27961171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:21,0 chr2 27961172 . C . PASS END=27961172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 27961173 . C . PASS END=27961173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 27961174 . C . PASS END=27961174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 27961175 . A . PASS END=27961184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,792:0,66,255:25,0 chr2 27961185 . A . PASS END=27961185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 27961186 . T . PASS END=27961186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 27961187 . T . PASS END=27961192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 27961193 . C . PASS END=27961198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 27961199 . G . PASS END=27961358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:28:0,80,1123:0,80,255:40,0 chr2 27961359 . C . PASS END=27961363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,77,255:23,0 chr2 27961364 . T . PASS END=27961364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,962:0,38,255:15,0 chr2 27961365 . C . PASS END=27961389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 27975739 . T . PASS END=27975753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:30:0,86,1147:0,86,255:38,0 chr2 27975754 . A . PASS END=27975754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr2 27975755 . G . PASS END=27975767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1319:0,87,255:40,0 chr2 27975768 . A . PASS END=27975768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1402:0,73,255:38,0 chr2 27975769 . T . PASS END=27975821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:36:0,90,1264:0,92,255:40,0 chr2 27977428 . C . PASS END=27977471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:63:0,120,1800:0,156,255:40,0 chr2 27980249 . G . PASS END=27980252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 27980253 . A . PASS END=27980267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 27980268 . G . PASS END=27980271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 27980272 . G . PASS END=27980272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 27980273 . A . PASS END=27980279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 27980280 . A . PASS END=27980280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:25,0 chr2 27980281 . G . PASS END=27980302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:24,0 chr2 27980303 . C . PASS END=27980311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 27984468 . A . PASS END=27984468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 27984469 . G . PASS END=27984474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,1041:0,51,255:30,0 chr2 27984475 . C . PASS END=27984475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 27984476 . A . PASS END=27984479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1094:0,54,255:31,0 chr2 27984480 . C . PASS END=27984529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1210:0,86,255:34,0 chr2 27984530 . T . PASS END=27984530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr2 27984531 . G . PASS END=27984563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr2 27994645 . A . PASS END=27994651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 27994652 . T . PASS END=27994652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,662:0,32,255:18,0 chr2 27994653 . C . PASS END=27994660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 27994661 . T . PASS END=27994661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:16,0 chr2 27994662 . C . PASS END=27994662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 27994663 . T . PASS END=27994663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:15,0 chr2 27994664 . T . PASS END=27994666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 27995541 . T . PASS END=27995559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,2:100:99:95:0,120,1800:0,245,255:40,0 chr2 27997291 . A . PASS END=27997397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:95:50:0,95,1751:0,95,255:40,0 chr2 28002300 . T . PASS END=28002328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:36:0,86,1460:0,86,255:40,2 chr2 28002329 . A . PASS END=28002329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:74:48:0,74,1532:0,74,255:40,2 chr2 28002330 . A . PASS END=28002423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,106,1745:0,106,255:40,0 chr2 28004482 . T . PASS END=28004491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,823:0,62,255:26,0 chr2 28004492 . G . PASS END=28004499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1155:0,87,255:30,0 chr2 28004500 . A . PASS END=28004500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 28004501 . A . PASS END=28004644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:30:0,84,1128:0,87,255:40,0 chr2 28004645 . T . PASS END=28004655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:28:0,69,1035:0,84,255:26,0 chr2 28005439 . G . PASS END=28005553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:38:0,99,1398:0,102,255:40,1 chr2 28005554 . T . PASS END=28005554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1420:0,76,255:31,0 chr2 28005555 . G . PASS END=28005561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1324:0,81,255:33,0 chr2 28032847 . T . PASS END=28032912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:60:0,120,1800:0,180,255:40,0 chr2 28050434 . C . PASS END=28050434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 28050435 . G . PASS END=28050435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr2 28050436 . T . PASS END=28050439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 28050440 . A . PASS END=28050469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,848:0,61,255:26,0 chr2 28050470 . G . PASS END=28050590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1024:0,81,255:39,0 chr2 28050591 . C . PASS END=28050617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,800:0,61,255:26,0 chr2 28050618 . T . PASS END=28050622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:24:0,51,765:0,56,255:21,0 chr2 28055553 . C . PASS END=28055559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:30,0 chr2 28055560 . T . PASS END=28055560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 28055561 . C . PASS END=28055638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1133:0,81,255:39,0 chr2 28055639 . T . PASS END=28055644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr2 28065934 . C . PASS END=28065938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 28065939 . C . PASS END=28066082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,980:0,81,255:40,0 chr2 28066083 . A . PASS END=28066098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:26,0 chr2 28069909 . C . PASS END=28069971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:77:0,120,1800:0,215,255:40,0 chr2 28070901 . C . PASS END=28070964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:64:0,120,1800:0,172,255:40,0 chr2 28081306 . C . PASS END=28081438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:38:0,97,1341:0,97,255:40,0 chr2 28084392 . T . PASS END=28084413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:61:0,108,1800:0,108,255:40,0 chr2 28093655 . T . PASS END=28093666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr2 28093667 . A . PASS END=28093667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 28093668 . C . PASS END=28093687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1088:0,90,255:34,0 chr2 28093688 . T . PASS END=28093688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1146:0,72,255:32,0 chr2 28093689 . G . PASS END=28093743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1233:0,80,255:36,0 chr2 28093744 . T . PASS END=28093744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:26,0 chr2 28093745 . C . PASS END=28093757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 28113124 . C . PASS END=28113129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,107,1360:0,107,255:40,0 chr2 28113130 . A . PASS END=28113130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1404:0,68,255:39,0 chr2 28113131 . G . PASS END=28113212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:85:38:0,85,1305:0,85,255:40,0 chr2 28117409 . A . PASS END=28117410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr2 28117411 . A . PASS END=28117463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:30:0,82,1141:0,82,255:40,0 chr2 28117464 . T . PASS END=28117464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1599:0,67,255:40,0 chr2 28117465 . C . PASS END=28117551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:36:0,90,1313:0,91,255:40,0 chr2 28152699 . C . PASS END=28152770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:36:0,84,1260:0,101,255:40,0 chr2 28152771 . A . PASS END=28152775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:33:0,75,1125:0,99,255:25,0 chr2 28210860 . G . PASS END=28210860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 28210861 . G . PASS END=28210861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr2 28210862 . G . PASS END=28210863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 28210864 . T . PASS END=28210864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 28210865 . A . PASS END=28210869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 28210870 . T . PASS END=28210877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:26,0 chr2 28210878 . C . PASS END=28210879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 28210880 . C . PASS END=28210880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 28210881 . A . PASS END=28210899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1000:0,81,255:33,0 chr2 28210900 . C . PASS END=28210900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1131:0,44,255:31,0 chr2 28210901 . G . PASS END=28210954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,954:0,80,255:33,0 chr2 28248093 . A . PASS END=28248355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:43:0,102,1559:0,102,255:40,3 chr2 28268592 . A . PASS END=28268666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,114,1515:0,115,255:40,0 chr2 28352138 . G . PASS END=28352241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:31:0,83,1194:0,83,255:40,0 chr2 28352242 . T . PASS END=28352242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1067:0,49,255:27,0 chr2 28352243 . G . PASS END=28352247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr2 28456010 . G . PASS END=28456010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 28456011 . T . PASS END=28456011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 28456012 . T . PASS END=28456032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,566:0,45,255:19,0 chr2 28456033 . C . PASS END=28456039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:21,0 chr2 28456040 . C . PASS END=28456040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 28456041 . C . PASS END=28456043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 28456044 . C . PASS END=28456044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 28456045 . T . PASS END=28456064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:26,0 chr2 28456065 . C . PASS END=28456076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1141:0,90,255:31,0 chr2 28456077 . T . PASS END=28456077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 28456078 . C . PASS END=28456083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 28456084 . T . PASS END=28456084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 28456085 . A . PASS END=28456087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:31,0 chr2 28456088 . A . PASS END=28456088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 28456089 . G . PASS END=28456099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1052:0,93,255:31,0 chr2 28456100 . T . PASS END=28456100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr2 28456101 . C . PASS END=28456101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:30,0 chr2 28456102 . C . LowGQ END=28456102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,735:7,0,255:25,0 chr2 28456103 . C . PASS END=28456103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:31:31:0,31,862:0,31,255:29,0 chr2 28456104 . T . PASS END=28456106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1074:0,93,255:31,0 chr2 28456107 . C . PASS END=28456107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,927:0,59,255:29,0 chr2 28456108 . A . PASS END=28456108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr2 28456109 . T . PASS END=28456120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:30,0 chr2 28456121 . T . PASS END=28456121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,962:0,60,255:28,0 chr2 28456122 . C . PASS END=28456142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1148:0,90,255:31,0 chr2 28456143 . T . PASS END=28456158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1000:0,68,255:26,0 chr2 28456159 . T . PASS END=28456159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 28456160 . T . PASS END=28456164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 28456165 . T . PASS END=28456165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 28456166 . C . PASS END=28456168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 28456169 . C . PASS END=28456172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr2 28456173 . C . PASS END=28456173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:16,0 chr2 28456174 . C . PASS END=28456179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:17,0 chr2 28456180 . G . PASS END=28456180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:15,0 chr2 28456181 . T . PASS END=28456182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 28460069 . T . PASS END=28460168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:37:0,103,1344:0,103,255:40,0 chr2 28464190 . G . PASS END=28464260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,122,255:40,0 chr2 28467647 . A . PASS END=28467729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:81:0,120,1800:0,243,255:40,0 chr2 28521205 . T . PASS END=28521213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,729:0,47,255:19,0 chr2 28521214 . C . PASS END=28521216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr2 28521217 . T . PASS END=28521217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 28521218 . G . PASS END=28521234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,809:0,66,255:23,0 chr2 28521235 . A . PASS END=28521235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 28521236 . G . PASS END=28521236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr2 28521237 . C . PASS END=28521237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 28521238 . C . PASS END=28521242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:26,0 chr2 28521243 . C . PASS END=28521251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 28521252 . C . PASS END=28521252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 28521253 . A . PASS END=28521354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1086:0,84,255:40,0 chr2 28521355 . C . PASS END=28521358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,79,255:25,0 chr2 28532949 . A . PASS END=28532991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1187:0,91,255:33,0 chr2 28533066 . T . PASS END=28533079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,945:0,65,255:26,0 chr2 28533080 . C . PASS END=28533080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:20,0 chr2 28533081 . C . PASS END=28533082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 28533083 . T . PASS END=28533083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:20,0 chr2 28533084 . T . PASS END=28533084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 28533085 . G . PASS END=28533085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr2 28533086 . A . PASS END=28533135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,800:0,63,255:23,0 chr2 28533136 . C . PASS END=28533162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 28533163 . G . PASS END=28533169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:16:0,35,585:0,35,255:13,0 chr2 28533170 . C . PASS END=28533176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 28533177 . A . PASS END=28533187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 28533188 . G . PASS END=28533188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 28533189 . T . PASS END=28533195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr2 28533196 . C . PASS END=28533213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 28533214 . C . PASS END=28533214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr2 28533215 . T . PASS END=28533225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 28533226 . A . PASS END=28533226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 28533227 . G . PASS END=28533236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 28550141 . G . PASS END=28550187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr2 28550188 . T . PASS END=28550199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 28550200 . T . PASS END=28550200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 28550201 . T . PASS END=28550210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 28550211 . G . PASS END=28550228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr2 28550229 . C . PASS END=28550244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:20:0,43,645:0,43,255:19,0 chr2 28550245 . C . PASS END=28550245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 28550246 . A . PASS END=28550254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:19,0 chr2 28550255 . A . PASS END=28550264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,41,255:13,0 chr2 28550265 . T . PASS END=28550286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,327:0,27,255:11,0 chr2 28550287 . G . PASS END=28550292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,356:0,30,255:10,0 chr2 28550293 . C . PASS END=28550299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 28550300 . A . PASS END=28550300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 28561317 . G . PASS END=28561396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:92:35:0,92,1260:0,92,255:40,0 chr2 28615677 . A . PASS END=28615677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:30,0 chr2 28615678 . T . PASS END=28615679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 28615680 . G . PASS END=28615700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1287:0,80,255:37,0 chr2 28615701 . A . PASS END=28615701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:35,0 chr2 28615702 . G . PASS END=28615703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1307:0,111,255:37,0 chr2 28616588 . A . PASS END=28616595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 28616596 . G . PASS END=28616603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr2 28616604 . C . PASS END=28616604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 28616605 . C . PASS END=28616612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:12,0 chr2 28616613 . T . PASS END=28616613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 28616614 . T . PASS END=28616641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 28616642 . T . PASS END=28616642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 28616643 . C . PASS END=28616646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 28616647 . T . LowGQ END=28616647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,304:6,0,255:9,0 chr2 28616648 . G . PASS END=28616649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 28616650 . G . PASS END=28616684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:8,0 chr2 28616685 . A . PASS END=28616689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr2 28626974 . A . PASS END=28626984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 28626985 . A . PASS END=28626994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr2 28626995 . G . PASS END=28626996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 28626997 . C . PASS END=28626999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 28627000 . A . PASS END=28627000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr2 28627001 . G . PASS END=28627004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 28627005 . G . PASS END=28627039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,848:0,62,255:26,0 chr2 28627040 . A . PASS END=28627065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,972:0,84,255:32,0 chr2 28627066 . G . PASS END=28627066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr2 28627067 . C . PASS END=28627167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1194:0,83,255:37,0 chr2 28627168 . A . PASS END=28627168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1140:0,68,255:30,0 chr2 28627169 . C . PASS END=28627183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1194:0,83,255:32,0 chr2 28627184 . A . PASS END=28627184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:27,0 chr2 28627185 . C . PASS END=28627188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,82,255:27,0 chr2 28627189 . T . PASS END=28627191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 28627192 . C . PASS END=28627192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 28627193 . A . PASS END=28627207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr2 28627208 . A . PASS END=28627208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 28627209 . G . PASS END=28627210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 28627211 . A . PASS END=28627211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,835:0,42,255:21,0 chr2 28627212 . G . PASS END=28627215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 28627216 . A . PASS END=28627216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:19,0 chr2 28627217 . G . PASS END=28627218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 28627219 . T . PASS END=28627219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 28627220 . G . PASS END=28627223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 28627224 . A . PASS END=28627225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,53,255:16,0 chr2 28631626 . C . PASS END=28631628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 28631629 . T . PASS END=28631629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,288:0,16,255:10,0 chr2 28631630 . C . PASS END=28631658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,374:0,33,255:13,0 chr2 28631659 . C . PASS END=28631667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 28631668 . A . PASS END=28631669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 28631670 . G . PASS END=28631673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 28631674 . A . PASS END=28631730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 28631731 . G . PASS END=28631731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 28631732 . C . PASS END=28631733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 28633340 . G . PASS END=28633342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:42:0,95,1492:0,95,255:40,0 chr2 28633343 . G . PASS END=28633343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1374:0,79,255:40,0 chr2 28633344 . C . PASS END=28633345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 28633346 . T . PASS END=28633346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:38:47:0,38,1310:0,38,255:40,0 chr2 28633347 . C . PASS END=28633438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:35:0,87,1395:0,87,255:40,0 chr2 28633439 . G . PASS END=28633442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,99,255:26,0 chr2 28634746 . A . PASS END=28634752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,138,255:40,0 chr2 28634753 . C . PASS END=28634789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1669:0,120,255:40,0 chr2 28634790 . G A, 49.89 PASS DP=52;MQ=249.89;MQRankSum=5.678;ReadPosRankSum=1.575;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,25,0:0.481,0.000:52:11,16,0:16,9,0:48:85,0,50,877,936,1813:255,0,255:27,0:4.9894e+01,6.6269e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,17,16,9:14,13,13,12 chr2 28634791 . T . PASS END=28634827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,105,1632:0,105,255:40,0 chr2 28634828 . G . PASS END=28634876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1363:0,95,255:40,0 chr2 28634877 . G . PASS END=28634877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr2 28634878 . T . PASS END=28634907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1213:0,92,255:35,0 chr2 28634908 . A . PASS END=28634908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:26,0 chr2 28634909 . A . PASS END=28634912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 28634913 . T . PASS END=28634914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 28634915 . G . PASS END=28634923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1192:0,83,255:29,0 chr2 28634924 . A . PASS END=28634944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,71,255:26,0 chr2 28634945 . C . PASS END=28634949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr2 28634950 . C . PASS END=28634950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 28634951 . T . PASS END=28634951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:18,0 chr2 28634952 . G . PASS END=28634954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 28634955 . G . PASS END=28634955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:19,0 chr2 28634956 . C . PASS END=28634958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 28634959 . A . PASS END=28634959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,677:0,27,255:20,0 chr2 28634960 . T . PASS END=28634960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,634:0,49,255:20,0 chr2 28634961 . G . PASS END=28634963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 28634964 . C . PASS END=28634966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,49,255:18,0 chr2 28634967 . T . PASS END=28634967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,607:0,33,255:14,0 chr2 28634968 . G . PASS END=28634975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,47,255:16,0 chr2 28634976 . C . PASS END=28634977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:32:16:0,32,549:0,32,255:15,0 chr2 28634978 . C . PASS END=28634980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr2 28634981 . T . PASS END=28634983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 28634984 . G . PASS END=28634997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,47,255:16,0 chr2 28634998 . A . PASS END=28634999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 28635000 . A . PASS END=28635003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 28635004 . G . PASS END=28635004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr2 28635005 . A . PASS END=28635019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,653:0,51,255:18,0 chr2 28635020 . A . PASS END=28635020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 28635021 . C . PASS END=28635022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 28635023 . G . PASS END=28635023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 28635024 . C . PASS END=28635032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr2 28635033 . C . PASS END=28635053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:25,0 chr2 28635054 . G . PASS END=28635054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:23,0 chr2 28635055 . G . PASS END=28635110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,886:0,61,255:25,0 chr2 28635111 . G . PASS END=28635111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 28635112 . C . PASS END=28635116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 28635117 . G . PASS END=28635143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:27:0,80,994:0,80,255:30,0 chr2 28635144 . A . PASS END=28635144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 28635145 . C . PASS END=28635146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1133:0,90,255:30,0 chr2 28635147 . T . PASS END=28635147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 28635148 . G . PASS END=28635193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,984:0,83,255:33,0 chr2 28635194 . T . PASS END=28635194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 28635195 . C . PASS END=28635232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1131:0,80,255:35,0 chr2 28635233 . G . PASS END=28635234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:36:0,72,1239:0,72,255:35,0 chr2 28635235 . T . PASS END=28635288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1133:0,80,255:36,0 chr2 28635289 . A . PASS END=28635315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:26:0,63,939:0,64,255:26,0 chr2 28718982 . A . PASS END=28719036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,102,1504:0,120,255:40,0 chr2 28739675 . G . PASS END=28739736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,105,1575:0,111,255:40,0 chr2 28741333 . A . PASS END=28741399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,130,255:40,0 chr2 28742572 . T . PASS END=28742630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,126,255:40,2 chr2 28746611 . A . PASS END=28746673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:62:0,120,1800:0,186,255:40,0 chr2 28748134 . C . PASS END=28748170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:30,0 chr2 28748171 . A . PASS END=28748171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 28748172 . C . PASS END=28748174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 28748772 . G . PASS END=28748812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,110,1582:0,110,255:40,0 chr2 28752184 . T . PASS END=28752274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:45:0,117,1755:0,135,255:40,0 chr2 28752595 . A . PASS END=28752646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,140,255:40,0 chr2 28753107 . G . PASS END=28753133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:58:0,120,1800:0,174,255:40,0 chr2 28754975 . C . PASS END=28755061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,131,255:40,0 chr2 28761153 . G . PASS END=28761160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr2 28761161 . A . PASS END=28761162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 28761163 . T . PASS END=28761163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 28761164 . T . PASS END=28761202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:25,0 chr2 28761203 . C . PASS END=28761204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 28761205 . G . PASS END=28761208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 28761209 . G . PASS END=28761219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 28761220 . T . PASS END=28761221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 28761222 . G . PASS END=28761243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr2 28761244 . A . PASS END=28761244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 28761245 . G . PASS END=28761248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 28761966 . G . PASS END=28761979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:28,0 chr2 28761980 . T . PASS END=28761980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 28761981 . G C, 47.19 PASS DP=28;MQ=250.00;MQRankSum=4.375;ReadPosRankSum=4.375;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,11,0:0.393,0.000:28:9,6,0:8,5,0:46:82,0,50,393,608,1001:255,0,255:17,0:4.7189e+01,1.0458e-04,5.3000e+01,3.9346e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,6,8,3:7,10,9,2 chr2 28761982 . T . PASS END=28762018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,969:0,84,255:34,0 chr2 28762019 . T . PASS END=28762025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 28762026 . T . PASS END=28762026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr2 28762027 . A . PASS END=28762045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:33,0 chr2 28763233 . C . PASS END=28763237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 28763238 . C . PASS END=28763238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 28763239 . A . PASS END=28763239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 28763240 . C . PASS END=28763242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr2 28763243 . G . PASS END=28763245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 28763246 . C . PASS END=28763246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 28763247 . C . PASS END=28763247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 28763248 . C . PASS END=28763248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 28763249 . T . PASS END=28763258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 28763259 . C . PASS END=28763259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 28763260 . A . PASS END=28763260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:22,0 chr2 28763261 . G . PASS END=28763265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 28763266 . G . PASS END=28763267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 28763268 . C . PASS END=28763269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 28763270 . A . PASS END=28763270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 28763271 . C . PASS END=28763271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 28763272 . C . PASS END=28763272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:19,0 chr2 28763273 . C . PASS END=28763282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 28763283 . A . PASS END=28763283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,782:0,42,255:22,0 chr2 28763284 . G . PASS END=28763284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 28763285 . G . PASS END=28763286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 28763287 . G . PASS END=28763290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 28763291 . A . PASS END=28763291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr2 28763292 . T . PASS END=28763292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,753:0,25,255:18,0 chr2 28763293 . G . PASS END=28763293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 28763294 . C . PASS END=28763298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,53,255:19,0 chr2 28763299 . G . PASS END=28763299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:15,0 chr2 28763300 . T . PASS END=28763303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,50,255:16,0 chr2 28763304 . A . PASS END=28763304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:13,0 chr2 28763305 . T . PASS END=28763305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:13,0 chr2 28763306 . C . PASS END=28763308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 28764574 . G . PASS END=28764581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:30,0 chr2 28764582 . G . PASS END=28764582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 28764583 . A . PASS END=28764631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:30:0,83,1058:0,83,255:39,0 chr2 28764632 . T . PASS END=28764632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:33,0 chr2 28764633 . G . PASS END=28764634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr2 28764635 . T . PASS END=28764635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:31,0 chr2 28764636 . T . PASS END=28764676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:32:0,84,1114:0,88,255:35,0 chr2 28764677 . C . PASS END=28764678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 28766079 . G . PASS END=28766129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:42:0,91,1395:0,91,255:40,0 chr2 28766130 . A . PASS END=28766130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1230:0,64,255:30,0 chr2 28766131 . G . PASS END=28766135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1350:0,81,255:31,0 chr2 28768319 . A . PASS END=28768341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,163,255:40,0 chr2 28770339 . T . PASS END=28770366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:71:0,120,1800:0,180,255:40,0 chr2 28771367 . C . PASS END=28771373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 28771374 . G . PASS END=28771393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:12,0 chr2 28771394 . A . PASS END=28771399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr2 28771400 . A . PASS END=28771400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:14,0 chr2 28771401 . C . PASS END=28771405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 28771406 . G . PASS END=28771406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 28771407 . C . PASS END=28771407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 28771408 . T . PASS END=28771408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr2 28771409 . G . PASS END=28771412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr2 28771413 . A . PASS END=28771424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:14:0,21,315:0,42,255:9,0 chr2 28771425 . T . PASS END=28771429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:12:14:0,12,180:0,42,255:5,0 chr2 28771430 . G . PASS END=28771432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:9:14:0,9,135:0,25,255:3,0 chr2 28771727 . A . PASS END=28771798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:49:0,120,1800:0,133,255:40,0 chr2 28772877 . G . PASS END=28772877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 28772878 . A . PASS END=28772878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 28772879 . G . PASS END=28772927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:31:0,89,1090:0,89,255:38,0 chr2 28772928 . C . PASS END=28772928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr2 28772929 . A . PASS END=28772940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:33,0 chr2 28772941 . A . PASS END=28772941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,950:0,38,255:29,0 chr2 28772942 . C . PASS END=28772944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1209:0,86,255:29,0 chr2 28772945 . G . PASS END=28772945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:26,0 chr2 28772946 . C . PASS END=28772951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:28,0 chr2 28775795 . G . PASS END=28775858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,115,1784:0,115,255:40,0 chr2 28785908 . T . PASS END=28785966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1217:0,81,255:40,0 chr2 28788147 . G . PASS END=28788196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:35,0 chr2 28788197 . T . PASS END=28788197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1064:0,44,255:30,0 chr2 28788198 . C . PASS END=28788199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 28788200 . G . PASS END=28788220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,969:0,65,255:26,0 chr2 28789663 . C . PASS END=28789677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 28789678 . G . PASS END=28789678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 28789679 . A . PASS END=28789680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 28789681 . C . PASS END=28789681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 28789682 . A . PASS END=28789682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 28789683 . T . PASS END=28789684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 28789685 . G . PASS END=28789701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 28789702 . G . PASS END=28789702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr2 28789703 . G . PASS END=28789706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:11,0 chr2 28796064 . A . PASS END=28796066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 28796067 . T . PASS END=28796067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr2 28796068 . C . PASS END=28796075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1111:0,80,255:31,0 chr2 28796076 . A . PASS END=28796076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 28796077 . A . PASS END=28796171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1135:0,94,255:40,0 chr2 28796172 . A . PASS END=28796172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,102,255:23,0 chr2 28800974 . G . PASS END=28801025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:34:0,89,1251:0,89,255:40,0 chr2 28802494 . A . PASS END=28802574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:47:0,119,1800:0,119,255:40,0 chr2 28804935 . G . PASS END=28805000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:63:0,120,1800:0,182,255:40,0 chr2 28805272 . G . PASS END=28805362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1075:0,84,255:40,0 chr2 28805363 . T . PASS END=28805363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 28805364 . G . PASS END=28805367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 28805368 . C . PASS END=28805372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1100:0,74,255:28,0 chr2 28808628 . G . PASS END=28808705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:38:0,81,1369:0,81,255:40,0 chr2 28808706 . T . PASS END=28808706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr2 28808707 . C . PASS END=28808708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:35,0 chr2 28808709 . G . PASS END=28808709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr2 28812317 . G . PASS END=28812322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:36,0 chr2 28812323 . A . PASS END=28812421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,110,1520:0,110,255:40,0 chr2 28812542 . G . PASS END=28812543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1202:0,93,255:31,0 chr2 28812544 . A . PASS END=28812544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 28812545 . G . PASS END=28812547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 28812548 . T . PASS END=28812548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 28812549 . T . PASS END=28812553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 28812554 . G . PASS END=28812554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 28812555 . A . PASS END=28812563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 28812564 . T . PASS END=28812564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:27,0 chr2 28812565 . C . PASS END=28812566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 28812567 . T . PASS END=28812596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:26,0 chr2 28812597 . A . PASS END=28812609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,737:0,47,255:20,0 chr2 28812610 . A . PASS END=28812610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:18,0 chr2 28812611 . G . PASS END=28812611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 28812612 . C . PASS END=28812614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 28812615 . C . PASS END=28812615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 28812616 . C . PASS END=28812628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,47,255:19,0 chr2 28812629 . A . PASS END=28812634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:17:0,30,450:0,51,255:13,0 chr2 28812635 . A . PASS END=28812636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 28812637 . G . PASS END=28812637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr2 28812872 . C . PASS END=28812924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:41:0,95,1239:0,95,255:40,0 chr2 28812925 . T . PASS END=28812925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1389:0,71,255:35,0 chr2 28812926 . A . PASS END=28812939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:38:0,93,1315:0,93,255:37,0 chr2 28812940 . C . PASS END=28812940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:30,0 chr2 28812941 . C . PASS END=28812943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:38:0,93,1395:0,98,255:31,0 chr2 28814000 . G . PASS END=28814032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,108,1620:0,119,255:40,0 chr2 28814033 . A G, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.645;ReadPosRankSum=2.440;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,24,0:0.545,0.000:44:8,13,0:12,11,0:48:85,0,49,850,715,1565:255,0,255:15,0:5.0000e+01,6.9116e-05,5.2284e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,8,16:7,13,11,13 chr2 28814034 . T . PASS END=28814038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,102,1530:0,107,255:35,0 chr2 28814567 . G . PASS END=28814569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 28814570 . C . PASS END=28814574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 28814575 . G . PASS END=28814585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr2 28814586 . C . PASS END=28814588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 28814589 . G . PASS END=28814589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 28814590 . C . PASS END=28814592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 28814593 . G . PASS END=28814593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr2 28814594 . G . PASS END=28814601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr2 28814602 . C . PASS END=28814602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 28814603 . C . PASS END=28814627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,842:0,61,255:26,0 chr2 28815528 . T . PASS END=28815586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,147,255:40,0 chr2 28816548 . G . PASS END=28816621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:93:43:0,93,1395:0,98,255:40,0 chr2 28816839 . A . PASS END=28816839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:40:0,89,1384:0,89,255:38,0 chr2 28816840 . G . PASS END=28816840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1343:0,65,255:38,0 chr2 28816841 . A . PASS END=28816841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:34:40:0,34,1280:0,34,255:36,0 chr2 28816842 . A . PASS END=28816843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1559:0,113,255:40,0 chr2 28816844 . G . PASS END=28816845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1407:0,74,255:40,0 chr2 28816846 . A . PASS END=28816848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1573:0,116,255:40,0 chr2 28816849 . C . PASS END=28816849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1492:0,69,255:40,0 chr2 28816850 . C . PASS END=28816851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:92:47:0,92,1604:0,92,255:40,0 chr2 28816852 . G . PASS END=28816852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1631:0,67,255:40,0 chr2 28816853 . G . PASS END=28816857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,108,1523:0,108,255:40,0 chr2 28816858 . T . PASS END=28816863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:81:49:0,81,1535:0,81,255:40,0 chr2 28816864 . G . PASS END=28816864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:30:49:0,30,1527:0,30,255:40,0 chr2 28816865 . A . PASS END=28816866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:50:0,103,1717:0,103,255:40,0 chr2 28816867 . T . PASS END=28816867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:62:52:0,62,1721:0,62,255:40,0 chr2 28816868 . C . PASS END=28816910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:48:0,81,1676:0,81,255:40,0 chr2 28816911 . A . PASS END=28816913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,106,1745:0,106,255:40,0 chr2 28816914 . T . PASS END=28816914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1627:0,72,255:40,0 chr2 28816915 . C . PASS END=28816920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:89:48:0,89,1634:0,89,255:40,0 chr2 28820872 . T . PASS END=28820915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,118,1800:0,118,255:40,0 chr2 28821519 . A . PASS END=28821522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,717:0,63,255:22,0 chr2 28821523 . C . PASS END=28821523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 28821524 . C . PASS END=28821542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:22:0,65,848:0,65,255:26,0 chr2 28821543 . A . PASS END=28821624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1119:0,82,255:40,0 chr2 28821625 . T . PASS END=28821627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:32,0 chr2 28823676 . G . PASS END=28823727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:61:0,120,1800:0,168,255:40,0 chr2 28824119 . A . PASS END=28824199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1112:0,80,255:40,0 chr2 28824479 . A . PASS END=28824590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:38:0,92,1199:0,92,255:40,0 chr2 28824766 . A . PASS END=28824792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:56:0,120,1800:0,120,255:40,0 chr2 28824793 . C G, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.630;ReadPosRankSum=0.689;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,37,0:0.597,0.000:62:14,14,0:11,23,0:47:85,0,47,1316,894,2217:255,0,255:25,0:5.0000e+01,8.9049e-05,4.9782e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,18,19:8,17,17,20 chr2 28824794 . A . PASS END=28824830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,117,1594:0,117,255:40,0 chr2 28824831 . G . PASS END=28824831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 28825688 . G . PASS END=28825696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 28825697 . G . PASS END=28825788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1159:0,93,255:40,0 chr2 28826833 . C . PASS END=28826836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr2 28826837 . T . PASS END=28826837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 28826838 . T . PASS END=28826845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 28826846 . T . PASS END=28826847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 28826848 . C . PASS END=28826881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1163:0,83,255:32,0 chr2 28826882 . G . PASS END=28826901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:27:0,68,1008:0,68,255:27,0 chr2 28826902 . C . PASS END=28826904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 28826905 . A . PASS END=28826910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr2 28826911 . C . PASS END=28826911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:21,0 chr2 28826912 . C . PASS END=28826914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,998:0,68,255:23,0 chr2 28827522 . A . PASS END=28827626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:39:0,84,1260:0,110,255:40,0 chr2 28828720 . G . PASS END=28828760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1133:0,96,255:36,0 chr2 28828761 . C . PASS END=28828761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:31,0 chr2 28828762 . C . PASS END=28828793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1203:0,88,255:34,0 chr2 28828794 . C . PASS END=28828799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1019:0,73,255:26,0 chr2 28828800 . C . PASS END=28828807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 28828808 . C . PASS END=28828815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 28829363 . C . PASS END=28829434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,114,1707:0,114,255:40,0 chr2 28836898 . A . PASS END=28836963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:44:0,86,1552:0,86,255:40,0 chr2 28836970 . C . PASS END=28836970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 28840594 . A . PASS END=28840653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,119,1667:0,119,255:40,0 chr2 28840654 . G . PASS END=28840654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 28841208 . T . PASS END=28841264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1260:0,101,255:40,0 chr2 28841265 . C . PASS END=28841266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:34:0,78,1170:0,102,255:26,0 chr2 28843132 . A . PASS END=28843199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:38:0,97,1305:0,97,255:40,0 chr2 28843467 . C . PASS END=28843510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:37:0,93,1296:0,93,255:40,0 chr2 28843746 . A . PASS END=28843748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:32,0 chr2 28843749 . T . PASS END=28843749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1097:0,68,255:32,0 chr2 28843750 . T . PASS END=28843845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:32:0,83,1186:0,83,255:40,0 chr2 28847924 . G . PASS END=28847927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 28847928 . A . PASS END=28847930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 28847931 . C . PASS END=28847931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr2 28847932 . C . PASS END=28847952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 28847953 . T . PASS END=28847971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 28847972 . C . PASS END=28847975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr2 28849295 . G . PASS END=28849302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1252:0,84,255:40,0 chr2 28849303 . C . PASS END=28849303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:40,0 chr2 28849304 . C . PASS END=28849389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1205:0,81,255:40,0 chr2 28849390 . A . PASS END=28849397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1108:0,74,255:26,0 chr2 28849398 . G . PASS END=28849409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr2 28849410 . A . PASS END=28849410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 28851430 . G . PASS END=28851448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1103:0,90,255:32,0 chr2 28851449 . A . PASS END=28851449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:32,0 chr2 28851450 . A . PASS END=28851488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1211:0,88,255:36,0 chr2 28851489 . T . PASS END=28851495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:27:0,69,1035:0,81,255:26,0 chr2 28851961 . C . PASS END=28851966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 28851967 . A . PASS END=28851967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 28851968 . G . PASS END=28851969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr2 28851970 . G . PASS END=28851970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 28851971 . C . PASS END=28851971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr2 28851972 . T . PASS END=28851977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1072:0,54,255:31,0 chr2 28851978 . C . PASS END=28851978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr2 28851979 . A . PASS END=28851979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr2 28851980 . A . PASS END=28851980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1034:0,39,255:33,0 chr2 28851981 . C . PASS END=28851981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 28851982 . G . PASS END=28851985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr2 28851986 . T . PASS END=28851987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 28851988 . G . PASS END=28851988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr2 28851989 . A . PASS END=28851989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 28851990 . G . PASS END=28851992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:36,0 chr2 28851993 . C . PASS END=28852052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1333:0,84,255:38,0 chr2 28853453 . G . PASS END=28853531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,152,255:40,0 chr2 28854164 . G . PASS END=28854235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,144,255:40,0 chr2 28854903 . C . PASS END=28854920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1253:0,92,255:40,0 chr2 28854921 . T . PASS END=28854957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:40:0,120,1504:0,120,255:40,0 chr2 28854958 . C T, 41.71 PASS DP=62;MQ=249.54;MQRankSum=5.761;ReadPosRankSum=5.533;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:40,21,0:0.344,0.000:61:16,12,0:24,9,0:41:76,0,50,751,1373,2123:255,0,255:37,0:4.1706e+01,3.1504e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,15,14,7:23,17,13,8:28854958 chr2 28854959 . G . PASS END=28854971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,176,255:40,0 chr2 28854972 . C A, 44.26 PASS DP=63;MQ=249.45;MQRankSum=5.960;ReadPosRankSum=4.590;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:39,23,0:0.371,0.000:62:12,12,0:27,11,0:44:79,0,50,822,1358,2180:255,0,255:38,0:4.4265e+01,1.8431e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,14,12,11:18,21,13,10:28854958 chr2 28854973 . C . PASS END=28855009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:62:0,120,1800:0,173,255:40,0 chr2 28855010 . G . PASS END=28855018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,161,255:40,0 chr2 28855811 . A . PASS END=28855874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:35:0,105,1289:0,105,255:40,0 chr2 28855875 . C . PASS END=28855888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:45:0,81,1215:0,135,255:39,0 chr2 28855889 . G . PASS END=28855892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:63:43:0,63,945:0,118,255:22,0 chr2 28855893 . T . PASS END=28855903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:42:34:0,42,630:0,102,255:18,0 chr2 28855904 . A . PASS END=28855906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:36:31:0,36,540:0,93,255:13,0 chr2 28856145 . C . PASS END=28856157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1156:0,83,255:40,0 chr2 28856158 . C . PASS END=28856194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,110,1613:0,110,255:40,0 chr2 28856195 . A G, 50.00 PASS DP=52;MQ=249.03;MQRankSum=6.135;ReadPosRankSum=5.325;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,29,0:0.558,0.000:52:14,12,0:9,17,0:48:85,0,49,1000,823,1823:255,0,255:23,0:5.0000e+01,7.1446e-05,5.1914e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,12,17:12,11,17,12 chr2 28856196 . G . PASS END=28856232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,135,255:40,0 chr2 28856233 . T . PASS END=28856314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,90,255:40,0 chr2 28856315 . A . PASS END=28856321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,90,255:24,0 chr2 28856322 . G . PASS END=28856336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,630:0,41,255:19,0 chr2 28856909 . C . PASS END=28856960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,133,255:40,0 chr2 28863793 . C . PASS END=28863867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:33:0,96,1263:0,98,255:40,0 chr2 28865724 . G . PASS END=28865749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:9,0 chr2 28865750 . G . PASS END=28865759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 28865760 . T C, 48.20 PASS DP=11;MQ=250.00;MQRankSum=2.520;ReadPosRankSum=1.246;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,4,0:0.364,0.000:11:4,1,0:3,3,0:47:83,0,50,143,250,393:122,0,230:7,0:4.8200e+01,8.7495e-05,5.3000e+01,1.4309e+02,2.8509e+02,3.9641e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,2,3,1:6,1,2,2 chr2 28865761 . T . PASS END=28865769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:12,0 chr2 28865770 . A . PASS END=28865770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 28865771 . C . PASS END=28865792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,451:0,36,255:13,0 chr2 28865793 . G . PASS END=28865797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 28865798 . C . PASS END=28865801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr2 28865802 . T . PASS END=28865802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 28865803 . G . PASS END=28865814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 28865815 . T . PASS END=28865815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 28865816 . G . PASS END=28865831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,615:0,41,255:18,0 chr2 28865832 . C . PASS END=28865832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 28865833 . T . PASS END=28865834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 28865835 . G . PASS END=28865837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 28865838 . G . PASS END=28865838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr2 28865839 . T . PASS END=28865842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 28865843 . C . PASS END=28865843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr2 28865844 . A . PASS END=28865844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 28865845 . T . PASS END=28865848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,737:0,24,255:20,0 chr2 28865849 . C . PASS END=28865849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:19,0 chr2 28865850 . G . PASS END=28865858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr2 28865859 . G . PASS END=28865859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr2 28865860 . T . PASS END=28865860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:18,0 chr2 28865861 . C . PASS END=28865863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,657:0,21,255:18,0 chr2 28865864 . G . PASS END=28865869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,629:0,40,255:19,0 chr2 28865870 . C . PASS END=28865870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:19,0 chr2 28865871 . A . PASS END=28865871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 28865872 . G . PASS END=28865907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,630:0,41,255:19,0 chr2 28865908 . T . PASS END=28865925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 28865926 . A . PASS END=28865926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 28865927 . G . PASS END=28865927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 28974991 . A . PASS END=28975009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,689:0,66,255:22,0 chr2 28975010 . A . PASS END=28975020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 28975021 . C . PASS END=28975032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 28975033 . C . PASS END=28975042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 28999717 . T . PASS END=28999724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:29,0 chr2 28999725 . T . PASS END=28999725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:27,0 chr2 28999726 . G . PASS END=28999841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1086:0,87,255:40,0 chr2 28999842 . A . PASS END=28999842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1158:0,66,255:34,0 chr2 28999843 . T . PASS END=28999848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:34,0 chr2 29001217 . G . PASS END=29001311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1233:0,89,255:40,0 chr2 29001675 . G . PASS END=29001677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:35:0,95,1275:0,95,255:36,0 chr2 29001678 . A . PASS END=29001678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:35,0 chr2 29001679 . T . PASS END=29001690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1291:0,87,255:40,0 chr2 29001691 . A G, 49.56 PASS DP=52;MQ=250.00;MQRankSum=6.158;ReadPosRankSum=-1.331;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,24,0:0.462,0.000:52:15,6,0:13,18,0:47:84,0,47,184,184,184:255,0,255:27,0:4.9555e+01,9.1637e-05,5.0000e+01,1.8433e+02,2.1910e+02,1.8734e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,13,15,9:16,12,9,15 chr2 29001692 . T . PASS END=29001728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,109,1800:0,109,255:40,0 chr2 29001729 . T . PASS END=29001905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:38:0,81,1242:0,81,255:40,0 chr2 29004604 . G . PASS END=29004733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,120,1800:0,127,255:40,0 chr2 29004734 . A . PASS END=29004734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:48:60:0,48,1960:0,48,255:40,6 chr2 29004735 . T . PASS END=29004735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:1:61:0,1,1914:0,1,255:40,3 chr2 29004736 . T . PASS END=29004812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,102,1800:0,102,255:40,1 chr2 29006773 . G . PASS END=29006844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,104,1473:0,104,255:40,0 chr2 29011524 . G . PASS END=29011675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:88:40:0,88,1521:0,88,255:40,0 chr2 29016729 . G . PASS END=29016863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:96:44:0,96,1440:0,132,255:40,0 chr2 29022065 . A . PASS END=29022065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr2 29022066 . T . PASS END=29022169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:28:0,81,1101:0,84,255:40,0 chr2 29038881 . A . PASS END=29039095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:35:0,81,1215:0,89,255:40,0 chr2 29039096 . T . PASS END=29039115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 29041914 . A . PASS END=29041914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 29041915 . T . PASS END=29041972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,164,255:40,0 chr2 29045191 . T . PASS END=29045279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:58:0,120,1800:0,158,255:40,0 chr2 29052014 . G . PASS END=29052172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:96:43:0,96,1440:0,105,255:40,0 chr2 29052173 . A . PASS END=29052173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1413:0,60,255:27,0 chr2 29052174 . T . PASS END=29052178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:42:0,87,1305:0,110,255:29,0 chr2 29052179 . T . PASS END=29052184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:72:30:0,72,1080:0,72,255:25,0 chr2 29052185 . G . PASS END=29052185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,928:0,51,255:23,0 chr2 29063038 . G . PASS END=29063045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,917:0,64,255:26,0 chr2 29063046 . C . PASS END=29063048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 29063049 . T . PASS END=29063049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr2 29063050 . G . PASS END=29063346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:27:0,81,970:0,81,255:40,0 chr2 29072716 . T . PASS END=29072807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:74:0,120,1800:0,204,255:40,0 chr2 29073065 . T . PASS END=29073108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,114,1710:0,123,255:40,0 chr2 29073194 . C . PASS END=29073271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:39:0,90,1388:0,90,255:40,0 chr2 29073938 . C . PASS END=29074164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:84:38:0,84,1260:0,98,255:40,0 chr2 29075274 . T . PASS END=29075365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:89:46:0,89,1637:0,89,255:40,0 chr2 29083984 . T . PASS END=29084159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,93,255:40,0 chr2 29084160 . G . PASS END=29084165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:32:0,63,945:0,80,255:22,0 chr2 29084166 . G . PASS END=29084174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:22:0,48,720:0,52,255:19,0 chr2 29086967 . T . PASS END=29086977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:115:0,120,1800:0,255,255:40,0 chr2 29087883 . C . PASS END=29087985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:44:0,95,1707:0,95,255:40,0 chr2 29092445 . C . PASS END=29092641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:35:0,82,1258:0,82,255:40,0 chr2 29092642 . A . PASS END=29092678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,105,1575:0,110,255:40,0 chr2 29092679 . T C, 49.36 PASS DP=42;MQ=250.00;MQRankSum=5.509;ReadPosRankSum=-0.202;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,19,0:0.452,0.000:42:14,10,0:9,9,0:48:84,0,50,679,746,1425:255,0,255:19,0:4.9360e+01,7.1964e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,7,12:11,12,8,11 chr2 29092680 . T . PASS END=29092711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1225:0,89,255:37,0 chr2 29092712 . T . PASS END=29092712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:28,0 chr2 29092713 . G . PASS END=29092716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr2 29092717 . A . PASS END=29092719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 29092720 . A . PASS END=29092790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,861:0,61,255:25,0 chr2 29092791 . C . PASS END=29092792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 29092793 . C . PASS END=29092793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:17,0 chr2 29092794 . T . PASS END=29092795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:25:0,48,720:0,75,255:16,0 chr2 29092796 . G . PASS END=29092797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:39:24:0,39,585:0,55,255:13,0 chr2 29092798 . G . PASS END=29092812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:17,0 chr2 29092813 . G . PASS END=29092849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,584:0,51,255:18,0 chr2 29092850 . G T, 37.22 PASS DP=18;MQ=250.00;MQRankSum=2.920;ReadPosRankSum=1.646;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,4,0:0.222,0.000:18:6,2,0:8,2,0:37:72,0,50,133,484,616:93,0,255:11,0:3.7220e+01,8.4552e-04,5.3001e+01,1.3256e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,1,3:8,6,1,3 chr2 29092851 . G . PASS END=29092869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:17,0 chr2 29092870 . T . PASS END=29092870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 29092871 . C . PASS END=29092875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr2 29092876 . G . PASS END=29092877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr2 29092878 . C . PASS END=29092878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 29092879 . T . PASS END=29092879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 29092880 . G . PASS END=29092882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29092883 . G . PASS END=29092887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29092888 . C . PASS END=29092889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29092890 . A . PASS END=29092890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 29092891 . G . PASS END=29092891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29092892 . T . PASS END=29092897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 29092898 . A . PASS END=29092898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29092899 . A . PASS END=29092900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:20,0 chr2 29092901 . A . PASS END=29092908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 29092909 . T . PASS END=29092909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 29092910 . C . PASS END=29092910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr2 29092911 . C . PASS END=29092922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:25,0 chr2 29092923 . A . PASS END=29092924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,787:0,44,255:23,0 chr2 29092925 . G . PASS END=29092938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,961:0,75,255:25,0 chr2 29092939 . A . PASS END=29092939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr2 29092940 . T . PASS END=29092970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,923:0,75,255:25,0 chr2 29092971 . T . PASS END=29092971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 29092972 . G . PASS END=29093031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,807:0,68,255:26,0 chr2 29093032 . G . PASS END=29093040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 29093041 . C . PASS END=29093055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr2 29093056 . C . PASS END=29093132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:18,0 chr2 29093133 . G . PASS END=29093143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 29117565 . A . PASS END=29117573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 29117574 . G . PASS END=29117598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr2 29117599 . T . PASS END=29117599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 29117600 . G . PASS END=29117615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:13,0 chr2 29117616 . C . PASS END=29117616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 29117617 . C . PASS END=29117618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 29117619 . T . PASS END=29117619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 29117620 . G . PASS END=29117622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 29117623 . C . PASS END=29117625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 29117626 . T . PASS END=29117626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 29117627 . C . PASS END=29117660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:18,0 chr2 29117661 . T . PASS END=29117661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr2 29117662 . C . PASS END=29117730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,631:0,48,255:19,0 chr2 29117731 . C . PASS END=29117736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:13,0 chr2 29117737 . T . PASS END=29117743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,45,255:9,0 chr2 29117744 . T . LowGQ END=29117747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,363:0,0,255:8,0 chr2 29117748 . T . PASS END=29117750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 29117751 . A . PASS END=29117773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:5:0,15,172:0,15,172:5,0 chr2 29117774 . G . LowGQ END=29117774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr2 29117775 . C . PASS END=29117787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr2 29117788 . A . LowGQ END=29117788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 29117789 . G . PASS END=29117789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr2 29124853 . G . PASS END=29124990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:40:0,93,1395:0,103,255:40,0 chr2 29129326 . A . PASS END=29129346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:66:0,120,1800:0,148,255:40,0 chr2 29129347 . G . PASS END=29129447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:58:0,120,1800:0,135,255:40,0 chr2 29135456 . C . PASS END=29135467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,946:0,78,255:26,0 chr2 29135468 . C G, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=2.546;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,17,0:0.586,0.000:29:7,7,0:5,10,0:48:85,0,48,592,427,1019:255,0,255:11,0:5.0000e+01,7.6882e-05,5.1122e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,9,8:9,3,9,8 chr2 29135469 . G . PASS END=29135505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1086:0,84,255:40,0 chr2 29135506 . A . PASS END=29135572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:35:0,81,1215:0,94,255:40,0 chr2 29135573 . C . PASS END=29135576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,89,255:25,0 chr2 29136935 . C . PASS END=29137061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:28:0,80,1025:0,80,255:40,0 chr2 29137062 . T . PASS END=29137071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr2 29137072 . C . PASS END=29137074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 29140759 . G . PASS END=29140855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:34:0,90,1316:0,92,255:40,0 chr2 29140856 . G . PASS END=29140856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:30,0 chr2 29140857 . A . PASS END=29140857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 29140858 . A . PASS END=29140861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,99,255:26,0 chr2 29145785 . C . PASS END=29145849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:59:0,120,1800:0,147,255:40,0 chr2 29147848 . G . PASS END=29148019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:48:0,117,1755:0,136,255:40,0 chr2 29149334 . G . PASS END=29149420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:45:0,120,1800:0,128,255:40,0 chr2 29150435 . G . PASS END=29150566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1258:0,84,255:40,0 chr2 29152445 . G . PASS END=29152455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,120,1800:0,126,255:40,0 chr2 29152456 . A G, 179.42 PASS DP=45;MQ=249.74;FractionInformativeReads=0.978 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,17,0:0,27,0:129:217,132,0,1687,132,1687:255,135,0:0,0:1.7942e+02,1.2942e+02,0.0000e+00,4.5000e+02,1.6419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,17:0,0,20,24 chr2 29152457 . G . PASS END=29152493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,120,1800:0,132,255:40,0 chr2 29152494 . A . PASS END=29152576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,119,1610:0,119,255:40,0 chr2 29158387 . A . PASS END=29158473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:49:0,120,1800:0,131,255:40,0 chr2 29159788 . C . PASS END=29159819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,167,255:40,0 chr2 29160797 . T . PASS END=29160860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:70:0,120,1800:0,203,255:40,0 chr2 29164327 . T . PASS END=29164440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,110,1664:0,110,255:40,0 chr2 29165178 . G . PASS END=29165247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,160,255:40,0 chr2 29169316 . A . PASS END=29169365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,169,255:40,0 chr2 29169466 . G . PASS END=29169574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:83:0,120,1800:0,206,255:40,0 chr2 29169575 . A . PASS END=29169611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,156,255:40,0 chr2 29169612 . T C, 49.58 PASS DP=52;MQ=250.00;MQRankSum=6.158;ReadPosRankSum=5.718;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,24,0:0.462,0.000:52:14,8,0:14,16,0:48:84,0,50,858,925,1783:255,0,255:25,0:4.9579e+01,6.9634e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,8,16:13,15,12,12 chr2 29169613 . T . PASS END=29169645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,108,1620:0,119,255:40,0 chr2 29217701 . A . PASS END=29217728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,143,255:40,0 chr2 29221009 . C . PASS END=29221011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 29221012 . A . PASS END=29221012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 29221013 . G . PASS END=29221024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,931:0,72,255:25,0 chr2 29221025 . C . PASS END=29221025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 29221026 . G . PASS END=29221084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,919:0,64,255:26,0 chr2 29221085 . T . PASS END=29221085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 29221086 . G . PASS END=29221089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 29221090 . G . PASS END=29221090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 29221091 . C . PASS END=29221095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 29221096 . A . PASS END=29221102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 29221103 . T . PASS END=29221103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 29221104 . C . PASS END=29221116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:18,0 chr2 29221117 . A . PASS END=29221117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:13,0 chr2 29221118 . A . PASS END=29221119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 29222047 . G . PASS END=29222047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 29222048 . T . PASS END=29222048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 29222049 . T . PASS END=29222049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 29222050 . C . PASS END=29222072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,377:0,36,255:13,0 chr2 29222073 . C . PASS END=29222073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 29222074 . T . PASS END=29222074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 29222075 . G . PASS END=29222110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:18,0 chr2 29222111 . A . PASS END=29222111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 29222112 . C . PASS END=29222151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,629:0,40,255:19,0 chr2 29222152 . A . PASS END=29222152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:15,0 chr2 29222153 . G . PASS END=29222174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr2 29222175 . C . PASS END=29222177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 29222178 . C . PASS END=29222183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 29222184 . A . PASS END=29222198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 29222199 . T . PASS END=29222199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 29222200 . C . PASS END=29222209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 29222210 . C . PASS END=29222254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,459:0,39,255:13,0 chr2 29222255 . C . PASS END=29222256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 29222257 . T . PASS END=29222258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29222259 . G . PASS END=29222266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 29222267 . C . PASS END=29222296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr2 29222297 . A . PASS END=29222297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:10,0 chr2 29222298 . A . PASS END=29222317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:11,0 chr2 29222318 . G . PASS END=29222319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 29222320 . C . PASS END=29222327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 29222328 . T . LowGQ END=29222328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr2 29222329 . C . PASS END=29222331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 29222332 . G . PASS END=29222334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 29225402 . C . PASS END=29225415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr2 29225416 . G . PASS END=29225419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 29225420 . G . PASS END=29225423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29225424 . C . PASS END=29225430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 29225431 . G . PASS END=29225431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 29225432 . G . PASS END=29225441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,582:0,45,255:18,0 chr2 29225442 . G . PASS END=29225443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 29225444 . A . PASS END=29225444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 29225445 . C . PASS END=29225452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr2 29225453 . T . PASS END=29225453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr2 29225454 . C . PASS END=29225467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,946:0,75,255:26,0 chr2 29225468 . C . PASS END=29225472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 29225473 . A . PASS END=29225473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 29225474 . G . PASS END=29225479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 29225480 . T . PASS END=29225552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,901:0,72,255:26,0 chr2 29225553 . G . PASS END=29225553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:20,0 chr2 29225554 . G . PASS END=29225564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:22,0 chr2 29225565 . A . PASS END=29225565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 29225566 . C . PASS END=29225571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 29225572 . A . PASS END=29225586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr2 29225587 . C . PASS END=29225592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:19:0,33,495:0,57,255:12,0 chr2 29225593 . T . PASS END=29225595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:14,0 chr2 29225596 . A . PASS END=29225609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr2 29225610 . G . PASS END=29225613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:7,0 chr2 29226358 . G . PASS END=29226417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 29226418 . G . PASS END=29226421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 29226422 . T . PASS END=29226424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 29226425 . T . PASS END=29226430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr2 29226431 . C . PASS END=29226434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 29226435 . C . PASS END=29226435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 29226436 . A . PASS END=29226460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 29226461 . C . PASS END=29226466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr2 29226467 . C . PASS END=29226469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 29226470 . C . PASS END=29226478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr2 29226479 . C . PASS END=29226479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 29226480 . T . PASS END=29226489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 29226490 . C . PASS END=29226497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 29226498 . G A, 67.68 PASS DP=7;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,2,0:0,5,0:18:105,21,0,242,21,242:249,21,0:0,0:6.7679e+01,1.7679e+01,7.4781e-02,2.3924e+02,5.2449e+01,2.4224e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,5:0,0,3,4 chr2 29226499 . T . PASS END=29226510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 29226511 . C . PASS END=29226511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 29226512 . A G, 65.19 PASS DP=6;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,6,0:1.000,0.000:6:0,2,0:0,4,0:15:103,18,0,233,18,233:233,18,0:0,0:6.5192e+01,1.5192e+01,1.3348e-01,2.2977e+02,4.9962e+01,2.3277e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,4:0,0,2,4 chr2 29226513 . G . PASS END=29226513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 29226514 . G . PASS END=29226542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 29226543 . C . PASS END=29226548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,155:3,0 chr2 29232761 . A . PASS END=29232761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 29232762 . T . PASS END=29232767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 29232768 . G . PASS END=29232773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr2 29232774 . G . PASS END=29232774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 29232775 . C . PASS END=29232781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 29232782 . C . PASS END=29232782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 29232783 . C . PASS END=29232788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,682:0,51,255:18,0 chr2 29232789 . G . PASS END=29232800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 29232801 . C . PASS END=29232801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 29232802 . T . PASS END=29232802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 29232803 . A . PASS END=29232803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr2 29232804 . G . PASS END=29232804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 29232805 . A . PASS END=29232805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 29232806 . G . PASS END=29232808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 29232809 . G . PASS END=29232809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 29232810 . G . PASS END=29232815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,787:0,66,255:23,0 chr2 29232816 . G . PASS END=29232816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:22,0 chr2 29232817 . C . PASS END=29232820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 29232821 . A . PASS END=29232821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:20,0 chr2 29232822 . G . PASS END=29232830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 29232831 . A . PASS END=29232831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 29232832 . G . PASS END=29232835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 29232836 . C . PASS END=29232836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 29232837 . C . PASS END=29232847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 29232848 . A . PASS END=29232851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,782:0,50,255:18,0 chr2 29232852 . G . PASS END=29232854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:18,0 chr2 29232855 . G . PASS END=29232857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:22:0,45,675:0,50,255:15,0 chr2 29232858 . C . PASS END=29232858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:15,0 chr2 29232859 . C . PASS END=29232860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,50,255:15,0 chr2 29232861 . A . PASS END=29232861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:13,0 chr2 29232862 . G . PASS END=29232862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:14,0 chr2 29232863 . T . PASS END=29232863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:39:22:0,39,585:0,49,255:13,0 chr2 29232864 . C . PASS END=29232864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:15,0 chr2 29232865 . C . PASS END=29232866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,50,255:15,0 chr2 29232867 . C . PASS END=29232867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:15,0 chr2 29232868 . T . PASS END=29232869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:22:0,45,675:0,50,255:15,0 chr2 29232870 . A . PASS END=29232870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:15,0 chr2 29232871 . G . PASS END=29232872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:15,0 chr2 29232873 . C . PASS END=29232874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:20:0,42,630:0,43,255:14,0 chr2 29232875 . A . PASS END=29232876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:36:20:0,36,540:0,44,255:13,0 chr2 29232877 . A . LowGQ END=29232877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,558:9,0,255:11,0 chr2 29232878 . T . PASS END=29232878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:11,0 chr2 29232879 . C . PASS END=29232879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,627:0,5,255:11,0 chr2 29232880 . C . PASS END=29232880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:11,0 chr2 29232881 . C . PASS END=29232881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,590:0,5,255:11,0 chr2 29232882 . T . PASS END=29232883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:21:20:0,21,620:0,21,255:9,0 chr2 29232884 . G . PASS END=29232886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:30:20:0,30,450:0,43,255:10,0 chr2 29232887 . C . PASS END=29232887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:27:20:0,27,405:0,60,255:9,0 chr2 29232888 . A . LowGQ END=29232888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,504:21,0,255:7,0 chr2 29232889 . G . PASS END=29232890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,360:0,24,255:8,0 chr2 29232891 . G . PASS END=29232893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:17:0,18,482:0,18,255:7,0 chr2 29232894 . GGTGTGT GGT,G, 82.96 PASS DP=16;MQ=250.00;FractionInformativeReads=0.500 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,3,5,0:0.375,0.625,0.000:8:0,1,1,0:0,2,4,0:25:89,50,28,36,0,29,84,36,32,69:251,0,255:0,11:8.2961e+01,4.7375e+01,2.7740e+01,3.2961e+01,1.4735e-02,2.9282e+01,1.1270e+02,6.7996e+01,6.4183e+01,1.0039e+02:0.00,3.00,6.00,3.00,6.00,6.00,34.77,37.77,37.77,37.77:0,0,5,3:0,0,3,5 chr2 29234321 . A . PASS END=29234367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1027:0,85,255:33,0 chr2 29237261 . A . PASS END=29237276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,743:0,60,255:24,0 chr2 29237277 . C . PASS END=29237277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 29237278 . T . PASS END=29237286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,947:0,72,255:25,0 chr2 29237287 . A . PASS END=29237287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 29237288 . G . PASS END=29237293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,848:0,75,255:26,0 chr2 29237294 . G . PASS END=29237302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 29237303 . C . PASS END=29237303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 29237304 . T . PASS END=29237377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1117:0,82,255:35,0 chr2 29237378 . A . PASS END=29237378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:26,0 chr2 29237379 . A . PASS END=29237380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 29237381 . C . PASS END=29237381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 29237382 . C . PASS END=29237386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29237387 . C . PASS END=29237420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,845:0,66,255:26,0 chr2 29237421 . C . PASS END=29237427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,52,255:19,0 chr2 29238514 . A . PASS END=29238543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,168,255:40,0 chr2 29239181 . A . PASS END=29239187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1470:0,112,255:40,0 chr2 29239188 . G . PASS END=29239219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:43:0,82,1411:0,82,255:40,0 chr2 29240020 . A . PASS END=29240030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 29240031 . C . PASS END=29240033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr2 29240034 . C . PASS END=29240034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 29240035 . T . PASS END=29240043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,833:0,61,255:26,0 chr2 29240044 . G . PASS END=29240045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 29240046 . C . PASS END=29240047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 29240048 . G . PASS END=29240052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 29240053 . A . PASS END=29240053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:27,0 chr2 29240054 . A . PASS END=29240059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1058:0,84,255:31,0 chr2 29240060 . A G, 50.00 PASS DP=31;MQ=249.62;MQRankSum=4.148;ReadPosRankSum=1.687;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:6,8,0:8,9,0:48:85,0,49,608,501,1109:255,0,255:14,0:5.0000e+01,6.8598e-05,5.2367e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,12,5:6,8,9,8 chr2 29240061 . G . PASS END=29240065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 29240066 . A . PASS END=29240066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 29240067 . G . PASS END=29240097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1145:0,80,255:31,0 chr2 29240098 . C . PASS END=29240100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 29240101 . G . PASS END=29240101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr2 29240102 . A . PASS END=29240103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 29240104 . G . PASS END=29240132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:25,0 chr2 29240133 . C . PASS END=29240133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 29240134 . C . PASS END=29240138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 29240139 . C . PASS END=29240139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr2 29240140 . C . PASS END=29240143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 29240144 . G . PASS END=29240144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:20,0 chr2 29240145 . C . PASS END=29240145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:21,0 chr2 29240146 . T . PASS END=29240151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 29240152 . A . PASS END=29240152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 29240153 . G . PASS END=29240161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr2 29240162 . T . PASS END=29240163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:30:23:0,30,759:0,30,255:21,0 chr2 29240164 . A . PASS END=29240164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 29240165 . A . PASS END=29240168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 29240169 . A . PASS END=29240170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 29240658 . G . PASS END=29240663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 29240664 . T . PASS END=29240664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 29240665 . T . PASS END=29240665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 29240666 . C . PASS END=29240666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 29240667 . C . PASS END=29240667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 29240668 . C . PASS END=29240668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 29240669 . C . PASS END=29240671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 29240672 . C . PASS END=29240672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:14,0 chr2 29240673 . G A, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=2.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,9,0:0.600,0.000:15:3,1,0:3,8,0:48:85,0,48,322,157,479:255,0,192:6,0:5.0000e+01,7.5847e-05,5.1264e+01,3.2209e+02,1.9173e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,6,3:2,4,2,7 chr2 29240674 . G . PASS END=29240674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 29240675 . G . PASS END=29240675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,1 chr2 29240676 . G . PASS END=29240676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:19:18:0,19,557:0,19,255:17,1 chr2 29240677 . C . PASS END=29240677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:6:19:0,6,586:0,6,255:17,1 chr2 29240678 . A . PASS END=29240678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:19,0 chr2 29240679 . G . PASS END=29240681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr2 29240682 . G . PASS END=29240682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 29240683 . G . PASS END=29240685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 29240686 . A C, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.377;ReadPosRankSum=0.044;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,13,0:0.684,0.000:19:3,2,0:3,11,0:45:85,0,43,465,157,622:255,0,125:5,0:5.0000e+01,1.4522e-04,4.6306e+01,4.5000e+02,1.9176e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,7,6:1,5,8,5 chr2 29240687 . C . PASS END=29240687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,676:0,19,255:20,0 chr2 29240688 . T . PASS END=29240688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29240689 . G . PASS END=29240689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 29240690 . T . PASS END=29240698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,856:0,72,255:25,0 chr2 29240699 . A . PASS END=29240699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr2 29240700 . C . PASS END=29240701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:26,0 chr2 29240702 . A . PASS END=29240706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 29240707 . G . PASS END=29240707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 29240708 . A . PASS END=29240717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 29240718 . G . PASS END=29240718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,983:0,26,255:26,0 chr2 29240719 . C . PASS END=29240722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 29240723 . A . PASS END=29240723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 29240724 . A . PASS END=29240725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 29240726 . G . PASS END=29240726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 29240727 . A . PASS END=29240737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr2 29240738 . A . PASS END=29240739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:29,0 chr2 29240740 . C . PASS END=29240745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1166:0,96,255:32,0 chr2 29240746 . G . PASS END=29240761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:32,0 chr2 29240762 . G . PASS END=29240780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr2 29240781 . C . PASS END=29240781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 29240782 . C . PASS END=29240782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 29240783 . A G, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=3.416;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,12,0:0.522,0.000:23:6,4,0:5,8,0:48:85,0,50,421,392,813:255,0,255:10,0:5.0000e+01,6.5751e-05,5.2907e+01,4.2112e+02,4.2695e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,5,7:7,4,7,5 chr2 29240784 . T . PASS END=29240788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29240789 . C . PASS END=29240789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 29240790 . G . PASS END=29240792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29240793 . A . PASS END=29240820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr2 29240821 . A . PASS END=29240822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 29244138 . A . PASS END=29244168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,159,255:40,0 chr2 29245024 . C . PASS END=29245161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,935:0,80,255:40,0 chr2 29245162 . A . PASS END=29245164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr2 29245165 . G . PASS END=29245165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1047:0,38,255:24,0 chr2 29245166 . C . PASS END=29245174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr2 29245952 . G . PASS END=29246057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,90,255:40,0 chr2 29247005 . G . PASS END=29247010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 29247011 . A . PASS END=29247012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:29,0 chr2 29247013 . C . PASS END=29247239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:30:0,80,1125:0,80,255:40,0 chr2 29247240 . A . PASS END=29247240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:28,0 chr2 29249719 . C . PASS END=29249728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr2 29249729 . C . PASS END=29249733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29249734 . G . PASS END=29249734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 29249735 . A . PASS END=29249749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:25,0 chr2 29249750 . G . PASS END=29249865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:28:0,84,1041:0,84,255:40,0 chr2 29249866 . C . PASS END=29249881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:37:0,96,1440:0,110,255:39,0 chr2 29255079 . G . PASS END=29255157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,107,1496:0,107,255:40,0 chr2 29255800 . A . PASS END=29255815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:36:0,94,1228:0,94,255:37,0 chr2 29255816 . A . PASS END=29255816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1223:0,56,255:35,0 chr2 29255817 . T . PASS END=29255915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1305:0,92,255:40,0 chr2 29255916 . A . PASS END=29255917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 29256335 . G . PASS END=29256348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1247:0,86,255:34,0 chr2 29256349 . T . PASS END=29256349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1255:0,75,255:33,0 chr2 29256350 . G . PASS END=29256429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:36:0,105,1409:0,107,255:40,0 chr2 29258330 . G . PASS END=29258330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 29258331 . C . PASS END=29258331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 29258332 . T . PASS END=29258347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:18,0 chr2 29258348 . A . PASS END=29258348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 29258349 . A . PASS END=29258353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,668:0,41,255:19,0 chr2 29258354 . G . PASS END=29258371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:23,0 chr2 29258372 . A . PASS END=29258372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:20,0 chr2 29258373 . C . PASS END=29258409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,900:0,69,255:24,0 chr2 29258410 . A . PASS END=29258410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 29258411 . G . PASS END=29258421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr2 29258422 . T . PASS END=29258422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr2 29258423 . G . PASS END=29258423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 29258424 . C . PASS END=29258424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 29258425 . T . PASS END=29258456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr2 29258457 . G . PASS END=29258469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr2 29258470 . T . PASS END=29258474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29258475 . G . PASS END=29258518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,629:0,44,255:19,0 chr2 29258519 . C . PASS END=29258522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 29259407 . G . PASS END=29259623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:34:0,89,1189:0,89,255:40,0 chr2 29268190 . A . PASS END=29268203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,865:0,72,255:26,0 chr2 29268204 . C . PASS END=29268211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 29268212 . G . PASS END=29268212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 29268213 . C . PASS END=29268216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 29268217 . C . PASS END=29268229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,986:0,78,255:26,0 chr2 29268230 . T . PASS END=29268238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 29268239 . T . PASS END=29268246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 29268247 . C . PASS END=29268273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 29268274 . C . PASS END=29268274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:18,0 chr2 29268275 . A . PASS END=29268276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29274622 . T . PASS END=29274631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29274632 . C . PASS END=29274636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:24,0 chr2 29274637 . T . PASS END=29274637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:23,0 chr2 29274638 . T . PASS END=29274666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,886:0,69,255:25,0 chr2 29274667 . G . PASS END=29274679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:28,0 chr2 29274680 . C . PASS END=29274680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 29274681 . A . PASS END=29274682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr2 29274683 . C . PASS END=29274719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1064:0,82,255:33,0 chr2 29274720 . A G, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.863;ReadPosRankSum=2.947;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,18,0:0.545,0.000:33:10,9,0:5,9,0:48:85,0,49,644,508,1151:255,0,255:14,0:5.0000e+01,6.8857e-05,5.2323e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,10,8:6,9,11,7 chr2 29274721 . C . PASS END=29274743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:31,0 chr2 29274744 . A . PASS END=29274744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,999:0,79,255:28,0 chr2 29274745 . T . PASS END=29274757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1335:0,99,255:35,0 chr2 29274758 . G . PASS END=29274769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1349:0,105,255:35,0 chr2 29274770 . C . PASS END=29274770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1271:0,64,255:31,0 chr2 29274771 . A . PASS END=29274833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1225:0,86,255:36,0 chr2 29274834 . G . PASS END=29274836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 29274837 . C . PASS END=29274850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1016:0,81,255:27,0 chr2 29274851 . G . PASS END=29274853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 29274854 . A . PASS END=29274854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr2 29274855 . C . PASS END=29274895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr2 29274896 . T . PASS END=29274896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr2 29274897 . G . PASS END=29274918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr2 29274919 . G . PASS END=29274919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 29274920 . C . PASS END=29274928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 29274929 . T . PASS END=29274929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 29274930 . G . PASS END=29274932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 29274933 . A . PASS END=29274939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:17,0 chr2 29274940 . A . PASS END=29274946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:17:0,39,585:0,51,255:13,0 chr2 29274947 . T . PASS END=29274959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 29284672 . T . PASS END=29284672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 29284685 . G . PASS END=29284685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29284695 . G . PASS END=29284695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 29284698 . C . PASS END=29284699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 29284727 . C . PASS END=29284727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 29284972 . T . PASS END=29284972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 29285083 . A . PASS END=29285083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29285086 . G . PASS END=29285086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29285140 . T . PASS END=29285140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 29285156 . G . PASS END=29285156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 29285173 . C . PASS END=29285173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 29285177 . G . PASS END=29285177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 29285189 . C . PASS END=29285189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 29285223 . C . PASS END=29285223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 29285293 . C . PASS END=29285294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 29285352 . C . PASS END=29285352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 29285528 . G . PASS END=29285528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 29285669 . T . PASS END=29285669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 29285766 . C . PASS END=29285766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 29285802 . C . PASS END=29285802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 29285805 . G . PASS END=29285805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 29285870 . C . PASS END=29285870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 29285891 . G . PASS END=29285891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 29285937 . G . PASS END=29285937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 29285950 . G . PASS END=29285950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 29285989 . C . PASS END=29285989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1166:0,99,255:33,0 chr2 29286021 . C . PASS END=29286021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:27,0 chr2 29286032 . T . PASS END=29286032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 29286049 . G . PASS END=29286049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:25,0 chr2 29286069 . G . PASS END=29286069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 29286210 . G . PASS END=29286210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr2 29286218 . C . PASS END=29286218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,140,255:40,0 chr2 29286310 . G . PASS END=29286310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 29286439 . A . PASS END=29286439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,990:0,82,255:32,0 chr2 29286457 . G . PASS END=29286457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 29286476 . G . PASS END=29286476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 29286511 . G . PASS END=29286511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 29286536 . C . PASS END=29286536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:35,0 chr2 29286578 . C . PASS END=29286578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 29286595 . A . PASS END=29286595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 29286685 . G . PASS END=29286685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 29286738 . C . PASS END=29286738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 29286747 . G . PASS END=29286747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 29286753 . G . PASS END=29286753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr2 29286782 . C . PASS END=29286782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 29286806 . C . PASS END=29286806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29286832 . T . PASS END=29286832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 29286861 . C . PASS END=29286861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 29286878 . G . PASS END=29286878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 29287077 . C . PASS END=29287077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 29287136 . C . PASS END=29287136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:29,0 chr2 29287227 . T C, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=0.073;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,14,0:0.519,0.000:27:7,5,0:6,9,0:47:85,0,47,185,185,185:255,0,255:11,0:5.0000e+01,9.0084e-05,4.9688e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,6,4,10:7,6,5,9:29287227 chr2 29287261 . A . PASS END=29287261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 29287322 . C . PASS END=29287323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 29287335 . C . PASS END=29287336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 29287340 . A . PASS END=29287340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 29287444 . C . PASS END=29287444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1074:0,82,255:32,0 chr2 29287452 . C . PASS END=29287452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 29287508 . A . PASS END=29287508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 29287531 . C . PASS END=29287531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr2 29287701 . G . PASS END=29287701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 29287735 . T . PASS END=29287745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,113,1604:0,113,255:40,0 chr2 29287746 . C . PASS END=29287883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:33:0,82,1305:0,82,255:40,0 chr2 29287884 . A . PASS END=29287889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 29287890 . T . PASS END=29287907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:26,0 chr2 29287908 . C . PASS END=29287916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:48:30:0,48,720:0,65,255:16,0 chr2 29287917 . G . PASS END=29287925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:33:26:0,33,495:0,78,255:11,0 chr2 29287926 . C CGCT, 49.90 PASS DP=26;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=0.810;FractionInformativeReads=0.808;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:7,4,0:4,6,0:48:79,0,50,304,239,543:255,0,255:11,15:4.9901e+01,6.6269e-05,5.3000e+01,3.0984e+02,2.7363e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:2,9,6,4:4,7,6,4 chr2 29287927 . G . LowGQ END=29287927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,10:26:0:26:0,0,233:255,0,255:21,0 chr2 29287928 . C . PASS END=29287933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 29287938 . C . PASS END=29287938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 29293460 . C . PASS END=29293461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 29293462 . G . PASS END=29293492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:17,0 chr2 29293493 . C . PASS END=29293493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 29293494 . T . PASS END=29293500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,659:0,51,255:18,0 chr2 29293501 . G . PASS END=29293505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 29293506 . A . PASS END=29293507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29293508 . G . PASS END=29293533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:22,0 chr2 29293534 . C . PASS END=29293534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 29293535 . T . PASS END=29293535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 29293536 . G . PASS END=29293536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 29293537 . G . PASS END=29293544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29293545 . A . PASS END=29293545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 29293546 . A . PASS END=29293562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 29293563 . A . PASS END=29293563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29293564 . A . PASS END=29293570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 29293571 . G . PASS END=29293571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr2 29293572 . G . PASS END=29293578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 29293579 . G . PASS END=29293581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 29293582 . A . PASS END=29293583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 29293584 . A . PASS END=29293593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr2 29293594 . T . PASS END=29293594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 29293595 . C . PASS END=29293595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr2 29293596 . T . PASS END=29293596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29293597 . C . PASS END=29293604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 29293605 . A . PASS END=29293606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29293607 . T . PASS END=29293607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 29293608 . C . PASS END=29293620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 29293621 . A . PASS END=29293622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29293623 . G . PASS END=29293625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 29293626 . C . PASS END=29293626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr2 29293627 . T . PASS END=29293631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 29293632 . T . PASS END=29293632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 29293633 . G . PASS END=29293635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 29293636 . C . PASS END=29293636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr2 29293637 . T . PASS END=29293638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29293639 . C . PASS END=29293639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 29293640 . C . PASS END=29293641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29293642 . G . PASS END=29293643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 29293644 . A . PASS END=29293649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 29293650 . C . PASS END=29293653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,753:0,49,255:19,0 chr2 29293654 . G . PASS END=29293654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 29293655 . T . PASS END=29293656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 29293657 . C . PASS END=29293657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 29293658 . C . PASS END=29293658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr2 29293659 . C . PASS END=29293689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:24,0 chr2 29293690 . T . PASS END=29293690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr2 29293691 . G . PASS END=29293699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,947:0,72,255:25,0 chr2 29293700 . A . PASS END=29293700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 29293701 . G . PASS END=29293729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,931:0,62,255:26,0 chr2 29293730 . G . PASS END=29293733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 29293734 . C . PASS END=29293739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 29293740 . G . PASS END=29293741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29293742 . G . PASS END=29293742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 29293743 . A . PASS END=29293772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1174:0,90,255:33,0 chr2 29293773 . T . PASS END=29293773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:27,0 chr2 29293774 . G . PASS END=29293778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1026:0,82,255:31,0 chr2 29293779 . C . PASS END=29293780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 29293781 . G . PASS END=29293787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 29293788 . T . PASS END=29293788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:26,0 chr2 29293789 . G . PASS END=29293793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 29293794 . T . PASS END=29293797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 29293798 . T . PASS END=29293798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29293799 . G . PASS END=29293816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,848:0,61,255:26,0 chr2 29293817 . T . PASS END=29293817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:18,0 chr2 29293818 . C . PASS END=29293836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:19:0,42,630:0,44,255:19,0 chr2 29293837 . C . PASS END=29293837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,643:0,26,255:13,0 chr2 29293838 . T . PASS END=29293838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:13,0 chr2 29293839 . G . PASS END=29293847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:14:0,36,540:0,37,255:13,0 chr2 29293848 . A . PASS END=29293848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 29293849 . C . PASS END=29293849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29293850 . A . PASS END=29293850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,397:0,25,255:12,0 chr2 29293851 . T . PASS END=29293851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 29293852 . T . PASS END=29293865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,443:0,39,255:13,0 chr2 29293866 . A . PASS END=29293867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,398:0,11,255:11,0 chr2 29293868 . G . LowGQ END=29293872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,343:0,0,255:11,0 chr2 29293873 . C . PASS END=29293873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 29293874 . G . LowGQ END=29293879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,227:0,0,255:12,0 chr2 29293880 . G . PASS END=29293880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr2 29293881 . G . LowGQ END=29293903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:11:0,0,92:0,0,183:9,0 chr2 29293904 . G . PASS END=29293904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 29293905 . T . LowGQ END=29293908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:9:0,0,86:0,0,131:7,0 chr2 29293909 . G . PASS END=29293909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,250:0,13,250:8,0 chr2 29293910 . G . LowGQ END=29293912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:9:0,0,49:42,0,131:7,0 chr2 29293913 . C . PASS END=29293913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 29293914 . T . LowGQ END=29293917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,63:25,0,136:8,0 chr2 29293918 . G . PASS END=29293918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,227:0,13,227:8,0 chr2 29293919 . A . LowGQ END=29293919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,247:28,0,255:8,0 chr2 29293920 . C . PASS END=29293921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 29293922 . T . LowGQ END=29293924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,247:14,0,255:8,0 chr2 29293925 . C . PASS END=29293925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 29293926 . A . LowGQ END=29293926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,231:58,0,255:8,0 chr2 29293927 . C . PASS END=29293927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:9,0 chr2 29293928 . T . LowGQ END=29293931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:11:0,0,175:0,0,208:10,0 chr2 29293932 . C . PASS END=29293932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 29293933 . A . LowGQ END=29293937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,196:0,0,224:9,0 chr2 29293938 . C . PASS END=29293938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 29293939 . A . LowGQ END=29293939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,178:53,0,231:7,0 chr2 29293940 . C . PASS END=29293940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 29293941 . T . LowGQ END=29293941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,222:17,0,239:7,0 chr2 29293942 . C . PASS END=29293942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 29293943 . T . LowGQ END=29293943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,200:17,0,217:7,0 chr2 29293944 . C . PASS END=29293944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 29293945 . G . PASS END=29293947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 29293948 . G . PASS END=29293948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 29293949 . G . PASS END=29293950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 29293951 . A . LowGQ END=29293951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,202:3,0,206:8,0 chr2 29293952 . G . PASS END=29293956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr2 29293957 . G . PASS END=29293957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 29293958 . G . PASS END=29293976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,337:0,33,255:12,0 chr2 29293977 . G . PASS END=29293977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 29293978 . T . PASS END=29293982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 29293983 . A . PASS END=29293983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,356:0,19,255:11,0 chr2 29293984 . A . PASS END=29293994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 29293995 . T . PASS END=29294005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 29294006 . G . PASS END=29294006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 29294007 . G . PASS END=29294007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 29294008 . G . PASS END=29294017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 29294018 . C . PASS END=29294018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 29294019 . T . PASS END=29294024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 29294025 . T . PASS END=29294025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 29294026 . C . PASS END=29294043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,429:0,39,255:13,0 chr2 29294044 . C . PASS END=29294046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr2 29294047 . C . PASS END=29294062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 29294063 . C . PASS END=29294063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 29294064 . T . PASS END=29294064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 29294065 . T . PASS END=29294066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 29294067 . G . PASS END=29294077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29294078 . C . PASS END=29294084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 29294085 . A . PASS END=29294085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr2 29294086 . G . PASS END=29294088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 29294089 . G . PASS END=29294089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 29294090 . G . PASS END=29294092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 29294093 . A . PASS END=29294093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 29294094 . G . PASS END=29294094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr2 29294095 . G . PASS END=29294095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,415:0,14,255:14,0 chr2 29294096 . C . PASS END=29294096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 29294097 . T . PASS END=29294101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,505:0,45,255:15,0 chr2 29294102 . C . PASS END=29294102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 29294103 . G . PASS END=29294121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:18,0 chr2 29294122 . C . PASS END=29294122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 29294123 . A . PASS END=29294169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,545:0,41,255:19,0 chr2 29294170 . T . PASS END=29294170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr2 29294171 . C . PASS END=29294179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 29294180 . C . PASS END=29294197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr2 29294198 . A . PASS END=29294297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,543:0,45,255:19,0 chr2 29294298 . C . PASS END=29294306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 29294307 . A . PASS END=29294311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29294312 . C . PASS END=29294312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr2 29294313 . C . PASS END=29294356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 29294357 . A . PASS END=29294357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 29294358 . G . PASS END=29294362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 29294363 . A . PASS END=29294363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 29294364 . G . PASS END=29294397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:15,0 chr2 29294398 . A . PASS END=29294398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29294399 . C . PASS END=29294443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 29294444 . T . PASS END=29294454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 29294455 . C . PASS END=29294457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29294458 . G . PASS END=29294471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr2 29294472 . C . PASS END=29294472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 29294473 . A . PASS END=29294485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr2 29294486 . T . PASS END=29294486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:23,0 chr2 29294487 . T . PASS END=29294502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:25,0 chr2 29294503 . T . PASS END=29294503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 29294504 . C . PASS END=29294544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,845:0,66,255:23,0 chr2 29294545 . T . PASS END=29294558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr2 29294559 . T . PASS END=29294560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29294561 . T . PASS END=29294561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 29294562 . C . PASS END=29294589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:24,0 chr2 29294590 . C . PASS END=29294590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr2 29294591 . A . PASS END=29294624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr2 29294625 . T . PASS END=29294629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 29294630 . G . PASS END=29294645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 29294646 . C . PASS END=29294649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 29294650 . G . PASS END=29294650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 29294651 . T . PASS END=29294668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1133:0,90,255:31,0 chr2 29294669 . C . PASS END=29294669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr2 29294670 . T . PASS END=29294691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1241:0,86,255:38,0 chr2 29294692 . T . PASS END=29294692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:36,0 chr2 29294693 . T . PASS END=29294718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1260:0,108,255:37,0 chr2 29294719 . A . PASS END=29294720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1144:0,66,255:27,0 chr2 29294721 . G . PASS END=29294722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 29294723 . G . PASS END=29294723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:28,0 chr2 29294724 . C . PASS END=29294728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr2 29294729 . G . PASS END=29294747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,937:0,65,255:26,0 chr2 29294748 . T . PASS END=29294758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,987:0,84,255:31,0 chr2 29294759 . T . PASS END=29294759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 29294760 . C . PASS END=29294774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:31,0 chr2 29294775 . G . PASS END=29294775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr2 29294776 . A . PASS END=29294777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 29294778 . A . PASS END=29294781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 29294782 . T . PASS END=29294784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 29294785 . G . PASS END=29294786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 29294787 . G . PASS END=29294787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 29294788 . C . PASS END=29294788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 29294789 . T . PASS END=29294789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 29294790 . T . PASS END=29294792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 29294793 . G . PASS END=29294794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29294795 . T . PASS END=29294802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:27:0,70,986:0,70,255:26,0 chr2 29294803 . G . PASS END=29294805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 29294806 . A . PASS END=29294844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:25,0 chr2 29294845 . A . PASS END=29294847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 29294848 . C . PASS END=29294850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29294851 . G . PASS END=29294852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29294853 . G . PASS END=29294859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 29294860 . A . PASS END=29294872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,692:0,57,255:19,0 chr2 29294873 . T . PASS END=29294874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:26:0,74,986:0,74,255:29,0 chr2 29294875 . C . PASS END=29294881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr2 29294882 . T . PASS END=29294882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 29294883 . C . PASS END=29294890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 29294891 . A . PASS END=29294891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 29294892 . T . PASS END=29294892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 29294893 . C . PASS END=29294893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:28,0 chr2 29294894 . C . PASS END=29294915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1103:0,90,255:31,0 chr2 29294916 . A . PASS END=29294916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr2 29294917 . A . PASS END=29294926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 29294927 . A . PASS END=29294927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 29294928 . G . PASS END=29294932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 29294933 . T . PASS END=29294933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 29294934 . T . PASS END=29294947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1125:0,90,255:32,0 chr2 29294948 . G . PASS END=29294962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1025:0,73,255:26,0 chr2 29294963 . A . PASS END=29294978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1202:0,90,255:31,0 chr2 29294979 . C . PASS END=29295009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1294:0,89,255:34,0 chr2 29295010 . G . PASS END=29295010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr2 29295011 . A . PASS END=29295015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:34,0 chr2 29295016 . A G, 46.05 PASS DP=35;MQ=250.00;MQRankSum=4.820;ReadPosRankSum=1.418;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,13,0:0.382,0.000:34:11,9,0:10,4,0:45:81,0,50,465,714,1179:255,0,255:17,0:4.6046e+01,1.2969e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,9,8,5:10,11,8,5 chr2 29295017 . T . PASS END=29295042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1123:0,80,255:32,0 chr2 29295043 . T . PASS END=29295044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:28,0 chr2 29295045 . C . PASS END=29295046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 29295047 . T . PASS END=29295047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 29295048 . C . PASS END=29295049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 29295050 . T . PASS END=29295050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 29295051 . C . PASS END=29295053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1074:0,90,255:31,0 chr2 29295054 . G . PASS END=29295060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1022:0,93,255:33,0 chr2 29295061 . A . PASS END=29295061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:31,0 chr2 29295062 . T . PASS END=29295099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1168:0,86,255:33,0 chr2 29295100 . A . PASS END=29295100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:32,0 chr2 29295101 . A . PASS END=29295144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1131:0,80,255:32,0 chr2 29295145 . G . PASS END=29295162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1041:0,73,255:26,0 chr2 29295163 . G . PASS END=29295163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr2 29295164 . C . PASS END=29295229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr2 29295230 . C . PASS END=29295232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,823:0,55,255:21,0 chr2 29295233 . T . PASS END=29295246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,892:0,69,255:23,0 chr2 29295247 . A . PASS END=29295248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,779:0,55,255:22,0 chr2 29295249 . A . PASS END=29295252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 29295253 . T . PASS END=29295253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:21,0 chr2 29295254 . G . PASS END=29295254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 29295255 . C . PASS END=29295255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 29295256 . C . PASS END=29295257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 29295258 . C . PASS END=29295259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 29295260 . A . PASS END=29295260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr2 29295261 . G . PASS END=29295261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 29295262 . C . PASS END=29295262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr2 29295263 . T . PASS END=29295264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 29295265 . C . PASS END=29295265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr2 29295266 . T . PASS END=29295266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 29295267 . G . PASS END=29295271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,670:0,49,255:19,0 chr2 29295272 . A . PASS END=29295272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:18,0 chr2 29295273 . G . PASS END=29295273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29295274 . G . PASS END=29295274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:20,0 chr2 29295275 . T . PASS END=29295275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,668:0,19,255:17,0 chr2 29295276 . C . PASS END=29295277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 29295278 . C . PASS END=29295278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:19,0 chr2 29295279 . T . PASS END=29295279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 29295280 . C . PASS END=29295280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:20,0 chr2 29295281 . T . PASS END=29295282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,803:0,61,255:22,0 chr2 29295283 . G . PASS END=29295283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 29295284 . A . PASS END=29295286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:23,0 chr2 29295287 . C . LowGQ END=29295287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,672:2,0,255:19,0 chr2 29295288 . T . PASS END=29295288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 29295289 . T . PASS END=29295289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,734:0,22,255:22,0 chr2 29295290 . C . PASS END=29295291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:24,0 chr2 29295292 . C . PASS END=29295292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,786:0,31,255:23,0 chr2 29295293 . A . PASS END=29295295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,756:0,45,255:23,0 chr2 29295296 . T . PASS END=29295297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,773:0,61,255:25,0 chr2 29295298 . C . PASS END=29295298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,701:0,22,255:23,0 chr2 29295299 . T . PASS END=29295299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,846:0,39,255:23,0 chr2 29295300 . G . PASS END=29295300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,681:0,44,255:22,0 chr2 29295301 . A . PASS END=29295302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 29295303 . A . PASS END=29295303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:11:26:0,11,577:0,11,255:19,0 chr2 29295304 . G . PASS END=29295305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr2 29295306 . T . PASS END=29295306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,823:0,48,255:22,0 chr2 29295307 . G . PASS END=29295310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,902:0,64,255:25,0 chr2 29295311 . T . PASS END=29295311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,712:0,47,255:24,0 chr2 29295312 . C . PASS END=29295313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:22,0 chr2 29295314 . T . PASS END=29295314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,644:0,22,255:20,0 chr2 29295315 . C . PASS END=29295320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,730:0,61,255:22,0 chr2 29295321 . G . PASS END=29295321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,801:0,47,255:19,0 chr2 29295322 . A . PASS END=29295324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,64,255:21,0 chr2 29295325 . C . PASS END=29295325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,623:0,25,255:17,0 chr2 29295326 . T . PASS END=29295326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,687:0,38,255:19,0 chr2 29295327 . G . PASS END=29295328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 29295329 . A . PASS END=29295329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:19,0 chr2 29295330 . G . PASS END=29295330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,621:0,19,255:17,0 chr2 29295331 . A . PASS END=29295337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 29295338 . T . PASS END=29295340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29295341 . G . PASS END=29295344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 29295345 . G . PASS END=29295347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 29295348 . A . PASS END=29295351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 29295352 . C . PASS END=29295357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:21,0 chr2 29295358 . C . PASS END=29295358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 29295359 . C . PASS END=29295377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 29295378 . T . PASS END=29295380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 29295381 . C . PASS END=29295383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29295384 . T . PASS END=29295384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr2 29295385 . T . PASS END=29295386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29295387 . C . PASS END=29295388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 29295389 . G A, 49.60 PASS DP=22;MQ=249.34;MQRankSum=3.132;ReadPosRankSum=2.275;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:6,5,0:6,5,0:48:84,0,50,350,428,778:255,0,255:9,0:4.9605e+01,6.9375e-05,5.3000e+01,3.4961e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,10,5,5:6,6,4,6 chr2 29295390 . T . PASS END=29295423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,47,255:19,0 chr2 29295424 . C . PASS END=29295426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 29295427 . C . PASS END=29295447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,437:0,36,255:13,0 chr2 29295448 . C . PASS END=29295464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:19,0 chr2 29295465 . C . PASS END=29295465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 29295466 . A . PASS END=29295467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 29295468 . A . PASS END=29295473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29295474 . T . PASS END=29295474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr2 29295475 . C . PASS END=29295478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 29295479 . T . PASS END=29295481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29295482 . C . PASS END=29295487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29295488 . G . PASS END=29295517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,631:0,41,255:19,0 chr2 29295518 . G . PASS END=29295524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 29295525 . G . PASS END=29295526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 29295527 . C . PASS END=29295528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr2 29295529 . C . PASS END=29295539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 29295540 . T . PASS END=29295541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 29295542 . G . PASS END=29295570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr2 29295571 . A . PASS END=29295571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 29295572 . G . PASS END=29295578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 29295579 . A . PASS END=29295579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 29295580 . A . PASS END=29295581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 29295582 . A . PASS END=29295582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:20:29:0,20,792:0,20,255:24,0 chr2 29295583 . T . PASS END=29295584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:28,0 chr2 29295585 . G . PASS END=29295622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,779:0,61,255:26,0 chr2 29295623 . A . PASS END=29295623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:20,0 chr2 29295624 . G . PASS END=29295637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:25:0,75,915:0,75,255:25,0 chr2 29295638 . A . PASS END=29295638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 29295639 . T . PASS END=29295647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,857:0,65,255:26,0 chr2 29295648 . C . PASS END=29295653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 29295654 . C . PASS END=29295656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 29295657 . C . PASS END=29295661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 29295662 . G . PASS END=29295662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 29295663 . G . PASS END=29295663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 29295664 . G . PASS END=29295664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 29295665 . C . PASS END=29295665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 29295666 . T . PASS END=29295675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:21,0 chr2 29295676 . G A, 48.25 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=2.590;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:5,6,0:12,6,0:47:83,0,50,429,570,999:255,0,255:11,0:4.8252e+01,8.6719e-05,5.3000e+01,4.2909e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,11,4,8:8,9,6,6 chr2 29295677 . C . PASS END=29295681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 29295682 . A . PASS END=29295687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:18,0 chr2 29295688 . A . PASS END=29295688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:18,0 chr2 29295689 . G . PASS END=29295692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr2 29295693 . A . PASS END=29295693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29295694 . A . PASS END=29295698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 29295699 . C . PASS END=29295706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29295707 . C . PASS END=29295713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr2 29295714 . T . PASS END=29295720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 29295721 . A . PASS END=29295721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr2 29295722 . A . PASS END=29295744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,621:0,40,255:18,0 chr2 29295745 . A . PASS END=29295745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 29295746 . A . PASS END=29295780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,568:0,40,255:19,0 chr2 29295781 . C . PASS END=29295785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr2 29295786 . A . PASS END=29295791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,690:0,46,255:19,0 chr2 29295792 . G . PASS END=29295792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 29295793 . G . PASS END=29295795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29295796 . G . PASS END=29295812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 29295813 . T . PASS END=29295814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 29295815 . G . PASS END=29295828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr2 29295829 . T . PASS END=29295854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr2 29295855 . G . PASS END=29295865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 29295866 . T C, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=3.592;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,11,0:0.579,0.000:19:4,5,0:4,6,0:48:85,0,49,393,229,622:255,0,156:8,0:5.0000e+01,7.3258e-05,5.1645e+01,3.9340e+02,2.6327e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,2,7,4:6,2,7,4 chr2 29295867 . T . PASS END=29295892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,615:0,51,255:19,0 chr2 29295893 . C . PASS END=29295894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 29295895 . G . PASS END=29295896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 29295897 . C . PASS END=29295900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 29295901 . G . PASS END=29295903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 29295904 . T . PASS END=29295904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 29295905 . C . PASS END=29295905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 29295906 . T . PASS END=29295933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,568:0,45,255:16,0 chr2 29295934 . C . PASS END=29295934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 29295935 . T . PASS END=29295936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 29295937 . C . PASS END=29295937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr2 29295938 . C . PASS END=29295949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:17,0 chr2 29295950 . G . PASS END=29295950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr2 29295951 . A . PASS END=29295957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 29295958 . G . PASS END=29295997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:13,0 chr2 29295998 . G . PASS END=29296002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:16,0 chr2 29296003 . T . PASS END=29296003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 29296004 . G . PASS END=29296094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:19,0 chr2 29296095 . A . PASS END=29296107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 29296108 . C . PASS END=29296109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 29296110 . C . PASS END=29296117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 29296118 . T . PASS END=29296120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 29296121 . C . PASS END=29296136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 29296137 . G . PASS END=29296165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,666:0,44,255:19,0 chr2 29296166 . A . PASS END=29296168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:22,0 chr2 29296169 . C . PASS END=29296169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr2 29296170 . G . PASS END=29296181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 29296182 . T . PASS END=29296182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 29296183 . C . PASS END=29296190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr2 29296191 . T . PASS END=29296191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,757:0,36,255:19,0 chr2 29296192 . G . PASS END=29296200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29296201 . A . PASS END=29296202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr2 29296203 . T . PASS END=29296217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:22,0 chr2 29296218 . C . PASS END=29296218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 29296219 . A . PASS END=29296238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr2 29296239 . T . PASS END=29296239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 29296240 . G . PASS END=29296243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 29296244 . C . PASS END=29296274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,551:0,41,255:19,0 chr2 29296275 . C . PASS END=29296276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29296277 . G . PASS END=29296305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 29296306 . T . PASS END=29296306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr2 29296307 . G . PASS END=29296335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,653:0,47,255:19,0 chr2 29296336 . T . PASS END=29296339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 29296340 . T . PASS END=29296341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29296342 . C . PASS END=29296348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 29296349 . G . PASS END=29296349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 29296350 . G . PASS END=29296366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:25,0 chr2 29296367 . G . PASS END=29296416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1036:0,87,255:30,0 chr2 29296417 . G . PASS END=29296417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 29296418 . G . PASS END=29296420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:30,0 chr2 29296421 . A . PASS END=29296421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:28,0 chr2 29296422 . T . PASS END=29296440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1049:0,87,255:29,0 chr2 29296441 . G . PASS END=29296441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 29296442 . A . PASS END=29296442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,996:0,51,255:29,0 chr2 29296443 . T . PASS END=29296450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1012:0,80,255:32,0 chr2 29296451 . A . PASS END=29296458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:31:0,72,1080:0,79,255:26,0 chr2 29296459 . C . PASS END=29296461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 29296462 . C . PASS END=29296462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:27,0 chr2 29296463 . A . PASS END=29296464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 29296465 . G . PASS END=29296467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:30:0,63,997:0,63,255:27,0 chr2 29296468 . G . PASS END=29296469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 29296470 . T . PASS END=29296470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 29296471 . G . PASS END=29296474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 29296475 . A . PASS END=29296475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 29296476 . T . PASS END=29296476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr2 29296477 . G . PASS END=29296483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 29296484 . A . PASS END=29296484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 29296485 . G . PASS END=29296496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 29296497 . T . PASS END=29296550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,770:0,62,255:26,0 chr2 29296551 . A . PASS END=29296551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 29296552 . G . PASS END=29296555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 29296556 . A . PASS END=29296558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29296559 . T . PASS END=29296561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:26,0 chr2 29296562 . G . PASS END=29296564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 29296565 . T . PASS END=29296565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:27,0 chr2 29296566 . A . PASS END=29296623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:30:0,84,1133:0,85,255:37,0 chr2 29296624 . A . PASS END=29296624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr2 29296625 . T . PASS END=29296928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:30:0,80,1119:0,80,255:40,0 chr2 29296929 . T . PASS END=29296929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 29296930 . C . PASS END=29297111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,82,255:40,0 chr2 29297112 . A . PASS END=29297112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1035:0,108,255:23,0 chr2 29297113 . A . PASS END=29297127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:44:20:0,44,675:0,44,255:19,0 chr2 29344255 . A . PASS END=29344255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1227:0,102,255:34,0 chr2 29344256 . T . PASS END=29344256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:33,0 chr2 29344257 . G . PASS END=29344387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:38:0,101,1441:0,101,255:40,0 chr2 29354124 . A . PASS END=29354127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1219:0,86,255:34,0 chr2 29354128 . T . PASS END=29354128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:33,0 chr2 29354129 . T . PASS END=29354263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:92:35:0,92,1244:0,92,255:40,0 chr2 29355018 . A . PASS END=29355111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:93:0,120,1800:0,246,255:40,0 chr2 29356521 . G . PASS END=29356631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,105,1419:0,107,255:40,0 chr2 29356632 . T . PASS END=29356641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:36:0,81,1215:0,107,255:35,0 chr2 29356642 . T . PASS END=29356668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 29356669 . A G, 45.30 PASS DP=23;MQ=250.00;MQRankSum=3.841;ReadPosRankSum=2.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:10,2,0:5,6,0:45:80,0,50,286,537,823:233,0,255:14,0:4.5300e+01,1.4988e-04,5.3000e+01,2.8615e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,11,2,6:7,8,6,2 chr2 29356670 . T . PASS END=29356672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 29356673 . A . PASS END=29356675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 29356676 . C . PASS END=29356682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 29358414 . A . PASS END=29358532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:36:0,81,1199:0,81,255:40,0 chr2 29366575 . A . PASS END=29366577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,617:0,57,255:19,0 chr2 29366578 . G . PASS END=29366582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:25,0 chr2 29366583 . A . PASS END=29366583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 29366584 . G . PASS END=29366585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 29366586 . A . PASS END=29366586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 29366587 . C . PASS END=29366610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1025:0,80,255:36,0 chr2 29366611 . G . PASS END=29366611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr2 29366612 . A . PASS END=29366792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:34:0,80,1282:0,80,255:40,0 chr2 29366793 . T . PASS END=29366810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1210:0,96,255:32,0 chr2 29366811 . G . PASS END=29366811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 29368098 . G . PASS END=29368233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,99,1485:0,108,255:40,0 chr2 29375551 . G . PASS END=29375694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1215:0,101,255:40,0 chr2 29379220 . G . PASS END=29379309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,156,255:40,0 chr2 29380070 . T . PASS END=29380268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:60:0,120,1800:0,167,255:40,0 chr2 29383199 . G . PASS END=29383223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,655:0,63,255:23,0 chr2 29383224 . A . PASS END=29383224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 29383225 . G . PASS END=29383229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 29383230 . T . PASS END=29383230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:23,0 chr2 29383231 . A . PASS END=29383238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:24,0 chr2 29383239 . T . PASS END=29383239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 29383240 . T . PASS END=29383246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:26,0 chr2 29383247 . G . PASS END=29383249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 29383250 . A . PASS END=29383250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 29383251 . A . PASS END=29383252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 29383253 . T . PASS END=29383253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 29383254 . C . PASS END=29383254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 29383255 . C . PASS END=29383256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 29383257 . C . PASS END=29383263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 29383264 . G . PASS END=29383265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 29383266 . G . PASS END=29383272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1109:0,80,255:29,0 chr2 29383273 . T . PASS END=29383273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:27,0 chr2 29383274 . T . PASS END=29383280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 29383281 . A . PASS END=29383295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:24:0,67,930:0,67,255:24,0 chr2 29383296 . C . PASS END=29383296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:21,0 chr2 29383297 . A . PASS END=29383332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 29383333 . G . PASS END=29383333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 29386697 . G . PASS END=29386808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:35:0,81,1203:0,81,255:40,0 chr2 29386809 . C . PASS END=29386820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,99,255:26,0 chr2 29390342 . A . PASS END=29390406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:91:0,120,1800:0,255,255:40,0 chr2 29397239 . G . PASS END=29397315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,171,255:40,0 chr2 29402469 . A . PASS END=29402499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,184,255:40,0 chr2 29404438 . A . PASS END=29404438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 29404439 . T . PASS END=29404449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr2 29404450 . T . PASS END=29404450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr2 29404451 . T . PASS END=29404464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,976:0,65,255:26,0 chr2 29404465 . G . PASS END=29404465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 29404466 . A . PASS END=29404467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 29404468 . C . PASS END=29404471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 29404472 . A . PASS END=29404476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 29404477 . C . PASS END=29404478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29404479 . C . PASS END=29404479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 29404480 . C . PASS END=29404485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 29404486 . T . PASS END=29404487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 29404488 . G . PASS END=29404549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1117:0,83,255:33,0 chr2 29404550 . A . PASS END=29404550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1307:0,78,255:34,0 chr2 29404551 . T . PASS END=29404576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:37:0,95,1325:0,95,255:38,0 chr2 29404577 . A . PASS END=29404577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:34,0 chr2 29404578 . C . PASS END=29404595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,111,1390:0,111,255:40,0 chr2 29404596 . T . PASS END=29404596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1451:0,74,255:40,0 chr2 29404597 . C . PASS END=29404750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:32:0,81,1196:0,86,255:40,0 chr2 29404751 . A . PASS END=29404759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:28:0,75,1125:0,79,255:26,0 chr2 29412357 . C . PASS END=29412471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,113,1551:0,113,255:40,0 chr2 29415675 . C . PASS END=29415675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 29415683 . T . PASS END=29415683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 29415687 . A . PASS END=29415687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 29415844 . C . PASS END=29415844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,148,255:40,0 chr2 29415901 . A . PASS END=29415901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 29415905 . G . PASS END=29415905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,108,1620:0,162,255:36,0 chr2 29416024 . C . PASS END=29416024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:48:33:0,48,720:0,99,255:16,0 chr2 29416077 . T . PASS END=29416077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:30,0 chr2 29416090 . T . PASS END=29416112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1197:0,91,255:33,0 chr2 29416113 . T . PASS END=29416113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 29416114 . A . PASS END=29416242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1217:0,86,255:37,0 chr2 29416243 . A . PASS END=29416243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:30,0 chr2 29416244 . G . PASS END=29416247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:34:0,92,1332:0,92,255:32,0 chr2 29416248 . C . PASS END=29416248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,984:0,36,255:28,0 chr2 29416249 . C . PASS END=29416267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:31:0,88,1152:0,88,255:33,0 chr2 29416268 . A . PASS END=29416268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 29416269 . G . PASS END=29416287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1125:0,93,255:33,0 chr2 29416288 . C . PASS END=29416288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:32,0 chr2 29416289 . A . PASS END=29416309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,90,255:33,0 chr2 29416310 . C . PASS END=29416310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 29416311 . C . PASS END=29416328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1103:0,80,255:35,0 chr2 29416329 . G . PASS END=29416365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1371:0,84,255:37,0 chr2 29416366 . G C, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=1.123;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:10,11,0:10,9,0:48:85,0,50,714,670,1385:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,11,9:12,8,16,4 chr2 29416367 . T . PASS END=29416374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1427:0,84,255:37,0 chr2 29416375 . C . PASS END=29416375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:34:39:0,34,1078:0,34,255:33,0 chr2 29416376 . T . PASS END=29416392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,104,1271:0,104,255:40,0 chr2 29416393 . A . PASS END=29416393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1381:0,73,255:37,0 chr2 29416394 . T . PASS END=29416403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1340:0,103,255:39,0 chr2 29416404 . T . PASS END=29416443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1260:0,91,255:39,0 chr2 29416444 . C . PASS END=29416480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1178:0,83,255:36,0 chr2 29416481 . T C, 50.00 PASS DP=36;MQ=250.00;MQRankSum=5.110;ReadPosRankSum=2.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,18,0:0.500,0.000:36:11,12,0:7,6,0:48:85,0,50,644,636,1279:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,9,9:10,8,7,11 chr2 29416482 . T . PASS END=29416515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,99,1360:0,108,255:39,0 chr2 29416516 . T . PASS END=29416516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr2 29416517 . G . PASS END=29416518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:37,0 chr2 29416519 . C . PASS END=29416534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1305:0,96,255:34,0 chr2 29416535 . C . PASS END=29416571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1103:0,86,255:33,0 chr2 29416572 . T C, 152.34 PASS DP=35;MQ=249.37;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,24,0:0,11,0:102:190,105,0,1357,105,1357:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,14:0,0,16,19 chr2 29416573 . C . PASS END=29416609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1241:0,89,255:35,0 chr2 29416610 . G . PASS END=29416655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,92,255:34,0 chr2 29416656 . C . PASS END=29416656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 29416657 . C . PASS END=29416679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr2 29416680 . G . PASS END=29416681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 29416682 . A . PASS END=29416682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 29416683 . G . PASS END=29416720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 29416721 . A . PASS END=29416722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:22,0 chr2 29416723 . T . PASS END=29416728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr2 29416729 . T . PASS END=29416729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 29416730 . T . PASS END=29416740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 29416741 . A . PASS END=29416741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr2 29416742 . A . PASS END=29416747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 29416748 . C . PASS END=29416750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 29416751 . T . LowGQ END=29416751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,627:6,0,255:16,0 chr2 29416752 . A . PASS END=29416757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 29416758 . T . PASS END=29416758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:18,0 chr2 29416759 . C . PASS END=29416769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 29416770 . T . PASS END=29416770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:14,0 chr2 29416771 . G . PASS END=29416771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 29416772 . T . PASS END=29416788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:10:0,30,380:0,30,255:12,0 chr2 29416793 . C . PASS END=29416793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 29419636 . C . PASS END=29419726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:82:33:0,82,1073:0,82,255:40,0 chr2 29419729 . A . PASS END=29419729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:29,0 chr2 29420402 . T . PASS END=29420402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1460:0,120,255:40,0 chr2 29420408 . A . PASS END=29420542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,99,1485:0,114,255:40,0 chr2 29420547 . G . PASS END=29420547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:42:0,90,1350:0,126,255:30,0 chr2 29420551 . G . PASS END=29420551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr2 29430031 . A . PASS END=29430031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1388:0,108,255:36,0 chr2 29430036 . C . PASS END=29430106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1351:0,93,255:40,0 chr2 29430107 . T . PASS END=29430107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:30,0 chr2 29430108 . G . PASS END=29430117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:32,0 chr2 29430118 . C . PASS END=29430118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 29430119 . C . PASS END=29430119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 29430120 . C . PASS END=29430138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:26,0 chr2 29430144 . G . PASS END=29430144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr2 29432646 . A . PASS END=29432646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 29432652 . C . PASS END=29432744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:36:0,81,1333:0,81,255:40,0 chr2 29432750 . A . PASS END=29432750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr2 29432796 . T . PASS END=29432796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,197,255:40,0 chr2 29436843 . G . PASS END=29436843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 29436847 . C . PASS END=29436847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 29436850 . C . PASS END=29436895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:40:0,96,1427:0,96,255:40,0 chr2 29436896 . T . PASS END=29436896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:35,0 chr2 29436897 . G . PASS END=29436923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1350:0,101,255:40,0 chr2 29436924 . C . PASS END=29436929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:33:0,75,1125:0,99,255:26,0 chr2 29436930 . C . PASS END=29436934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 29436935 . A . PASS END=29436947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,68,255:26,0 chr2 29436950 . G . PASS END=29436950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 29443562 . T . PASS END=29443562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 29443570 . A . PASS END=29443570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1282:0,105,255:35,0 chr2 29443572 . C . PASS END=29443674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1375:0,87,255:40,0 chr2 29443675 . C . PASS END=29443675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1296:0,62,255:29,0 chr2 29443676 . G . PASS END=29443689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1180:0,83,255:31,0 chr2 29443690 . T . PASS END=29443690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:27,0 chr2 29443691 . G . PASS END=29443694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 29443695 . G . PASS END=29443695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 29443696 . A . PASS END=29443698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 29443699 . T . PASS END=29443699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr2 29443700 . T . PASS END=29443701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr2 29443704 . G . PASS END=29443704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:23,0 chr2 29443854 . C . PASS END=29443867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:25:0,42,630:0,62,255:16,0 chr2 29443868 . T . PASS END=29443872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:39:27:0,39,585:0,81,255:13,0 chr2 29443873 . G . PASS END=29443875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:28:0,42,630:0,68,255:14,0 chr2 29443876 . G . PASS END=29443895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:36:27:0,36,540:0,52,255:13,0 chr2 29443896 . A AGCAG, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=-1.509;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,16,0:0.571,0.000:28:6,7,0:6,9,0:48:79,0,49,672,456,1128:255,0,255:12,21:5.0000e+01,7.2481e-05,5.1752e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:6,6,8,8:6,6,9,7 chr2 29443897 . G . LowGQ END=29443897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:13,16:29:0:29:0,0,0:255,0,255:27,1 chr2 29443898 . C . PASS END=29443898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 29443899 . A . PASS END=29443899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 29443900 . G . PASS END=29443900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,1 chr2 29443901 . G . PASS END=29443901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:29,0 chr2 29443902 . C . PASS END=29443907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 29443908 . A . PASS END=29443908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 29443909 . G . PASS END=29443913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29443914 . T . PASS END=29443914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 29443915 . C . PASS END=29443915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29443916 . C . PASS END=29443916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 29443917 . A . PASS END=29443923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 29443924 . G . PASS END=29443924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 29443925 . G . PASS END=29443933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1086:0,90,255:30,0 chr2 29443934 . T . PASS END=29443939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 29443940 . T . PASS END=29443970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,61,255:26,0 chr2 29443971 . G . PASS END=29443971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29443972 . A . PASS END=29443984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr2 29443985 . G . PASS END=29443985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:24,0 chr2 29443986 . G . PASS END=29443998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,908:0,71,255:25,0 chr2 29443999 . T . PASS END=29443999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 29444000 . T . PASS END=29444007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 29444008 . T . PASS END=29444009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 29444010 . C . PASS END=29444013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 29444014 . T . PASS END=29444014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 29444015 . G . PASS END=29444015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29444016 . C . PASS END=29444016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 29444017 . G . PASS END=29444021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 29444022 . C . PASS END=29444022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 29444023 . T . PASS END=29444035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,760:0,63,255:21,0 chr2 29444036 . T . PASS END=29444036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr2 29444037 . C . PASS END=29444038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 29444039 . T . PASS END=29444063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,695:0,63,255:22,0 chr2 29444064 . C . PASS END=29444070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 29444071 . A . PASS END=29444071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:17,0 chr2 29444072 . A . PASS END=29444075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,729:0,57,255:19,0 chr2 29444076 . G T, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=3.442;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,11,0:0.611,0.000:18:3,4,0:4,7,0:47:85,0,48,393,222,615:255,0,192:7,0:5.0000e+01,7.9471e-05,5.0811e+01,3.9337e+02,2.5636e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,2,9:6,1,5,6 chr2 29444077 . A . PASS END=29444085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,657:0,41,255:19,0 chr2 29444086 . A . PASS END=29444087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr2 29444088 . C . PASS END=29444091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr2 29444092 . T . PASS END=29444094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 29444095 . C T, 101.18 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,7,0:0,11,0:51:139,54,0,698,54,698:255,60,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,15:0,0,10,8 chr2 29444096 . A . PASS END=29444096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:20:0,42,630:0,44,255:13,0 chr2 29444097 . A . PASS END=29444102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:15:0,30,450:0,45,255:13,0 chr2 29444103 . A . PASS END=29444103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:9,0 chr2 29445210 . C . PASS END=29445216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:26,0 chr2 29445217 . T . PASS END=29445236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr2 29445237 . T . PASS END=29445237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 29445238 . C . PASS END=29445238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 29445239 . C . PASS END=29445240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 29445241 . G . PASS END=29445249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:32,0 chr2 29445250 . G . PASS END=29445250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:30,0 chr2 29445251 . T . PASS END=29445260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1196:0,85,255:30,0 chr2 29445261 . A . PASS END=29445261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 29445262 . C . PASS END=29445268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 29445269 . C . PASS END=29445269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 29445270 . A . PASS END=29445274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 29445297 . G . PASS END=29445297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 29445382 . C . PASS END=29445420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1473:0,90,255:40,0 chr2 29445421 . T . PASS END=29445453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1381:0,84,255:40,0 chr2 29445454 . A . PASS END=29445454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:31,0 chr2 29445455 . G . PASS END=29445457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr2 29445458 . G T, 50.00 PASS DP=35;MQ=250.00;MQRankSum=4.983;ReadPosRankSum=2.717;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,20,0:0.571,0.000:35:7,6,0:8,14,0:48:85,0,48,715,528,1244:255,0,255:14,0:5.0000e+01,7.4552e-05,5.1440e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,13,9,11:8,7,7,13 chr2 29445459 . C . PASS END=29445474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:34,0 chr2 29445476 . G . PASS END=29445476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 29446204 . T . PASS END=29446204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 29446207 . C . PASS END=29446221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,134,255:40,0 chr2 29446222 . G . PASS END=29446394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:65:0,120,1800:0,185,255:40,0 chr2 29446405 . G . PASS END=29446405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 29447495 . T . PASS END=29447495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 29447496 . C . PASS END=29447496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1096:0,69,255:30,0 chr2 29447497 . A . PASS END=29447506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,95,255:33,0 chr2 29447507 . T . PASS END=29447507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:32,0 chr2 29447508 . C . PASS END=29447544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,105,1385:0,111,255:40,0 chr2 29448326 . C . PASS END=29448431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,99,1416:0,105,255:40,0 chr2 29449778 . G . PASS END=29449778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 29449782 . C . PASS END=29449782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 29449785 . T . PASS END=29449785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 29449788 . C . PASS END=29449818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1218:0,83,255:40,0 chr2 29449819 . C T, 49.27 PASS DP=46;MQ=249.48;MQRankSum=5.226;ReadPosRankSum=2.823;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,21,0:0.457,0.000:46:11,15,0:14,6,0:48:84,0,50,693,865,1558:255,0,255:26,0:4.9274e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,13,8:12,13,13,8 chr2 29449820 . G . PASS END=29449856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,131,255:40,0 chr2 29449857 . C . PASS END=29449940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,102,1435:0,106,255:40,0 chr2 29450435 . G . PASS END=29450436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1371:0,95,255:36,0 chr2 29450440 . C . PASS END=29450533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1395:0,97,255:40,0 chr2 29450534 . G . PASS END=29450534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:28,0 chr2 29450535 . C . PASS END=29450538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1260:0,101,255:30,0 chr2 29450540 . T . PASS END=29450541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1170:0,63,255:26,0 chr2 29451750 . C . PASS END=29451750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29451751 . T . PASS END=29451752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 29451753 . T . PASS END=29451755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 29451756 . A . PASS END=29451756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr2 29451757 . T . PASS END=29451761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 29451762 . C . PASS END=29451763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr2 29451764 . C . PASS END=29451773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 29451774 . C . PASS END=29451775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,829:0,41,255:23,0 chr2 29451776 . G . PASS END=29451776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:23,0 chr2 29451777 . A . PASS END=29451778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 29451779 . G . PASS END=29451780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 29451781 . G . PASS END=29451782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 29451783 . A . PASS END=29451784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,689:0,58,255:22,0 chr2 29451785 . C . PASS END=29451789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 29451790 . T . PASS END=29451790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:11:26:0,11,489:0,11,255:21,0 chr2 29451791 . C . PASS END=29451792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,706:0,61,255:24,0 chr2 29451793 . A . LowGQ END=29451793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,10:26:0:26:0,0,255:125,0,255:15,0 chr2 29451794 . C . PASS END=29451797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 29451798 . C . PASS END=29451798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 29451799 . T . LowGQ END=29451799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,8:25:0:25:0,0,304:72,0,255:16,0 chr2 29451800 . C . PASS END=29451800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,756:0,45,255:23,0 chr2 29451801 . C . PASS END=29451801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 29451802 . G . LowGQ END=29451804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,7:26:0:26:0,0,279:5,0,255:21,0 chr2 29451805 . A . PASS END=29451805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,717:0,44,255:23,0 chr2 29451806 . C . PASS END=29451806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,80,255:26,0 chr2 29451807 . C . PASS END=29451807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 29451808 . C . PASS END=29451810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:26,0 chr2 29451811 . T . LowGQ END=29451811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,11:27:0:27:0,0,386:115,0,255:16,0 chr2 29451812 . C . PASS END=29451812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,80,255:26,0 chr2 29451813 . T . LowGQ END=29451814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,460:0,0,255:24,0 chr2 29451815 . G . PASS END=29451815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,805:0,64,255:25,0 chr2 29451816 . T . PASS END=29451816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,740:0,33,255:24,0 chr2 29451817 . C . LowGQ END=29451819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:27:0,0,684:0,0,255:24,0 chr2 29451820 . C . PASS END=29451821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 29451822 . A . PASS END=29451822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,847:0,37,255:25,0 chr2 29451823 . C . PASS END=29451824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:40:29:0,40,910:0,40,255:26,0 chr2 29451825 . C . PASS END=29451827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 29451828 . A . LowGQ END=29451828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,7:30:0:30:0,0,695:54,0,255:22,0 chr2 29451829 . C . PASS END=29451829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 29451830 . T . LowGQ END=29451830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,714:29,0,255:23,0 chr2 29451831 . T . PASS END=29451832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:46:32:0,46,970:0,46,255:28,0 chr2 29451833 . T . PASS END=29451833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:1:34:0,1,869:0,1,255:29,0 chr2 29451834 . T . PASS END=29451834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 29451835 . C . PASS END=29451835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1020:0,68,255:29,0 chr2 29451836 . A . LowGQ END=29451836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:0:34:0,0,900:25,0,255:27,0 chr2 29451837 . T . PASS END=29451837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1001:0,30,255:28,0 chr2 29451838 . G . PASS END=29451838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1027:0,66,255:29,0 chr2 29451839 . G . PASS END=29451839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 29451840 . C . PASS END=29451840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,953:0,33,255:28,0 chr2 29451841 . C . PASS END=29451841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 29451842 . T . LowGQ END=29451842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:33:0,0,825:21,0,255:28,0 chr2 29451843 . G . PASS END=29451843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,926:0,27,255:30,0 chr2 29451844 . G . PASS END=29451845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:33:0,82,1141:0,82,255:33,0 chr2 29451846 . G . PASS END=29451847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:36:0,61,1150:0,61,255:31,0 chr2 29451848 . C . PASS END=29451849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1158:0,53,255:31,0 chr2 29451850 . G . PASS END=29451851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:33,0 chr2 29451852 . A . PASS END=29451852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1227:0,56,255:32,0 chr2 29451853 . A . PASS END=29451854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1286:0,92,255:34,0 chr2 29451855 . G . PASS END=29451874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:38:0,83,1301:0,83,255:39,0 chr2 29451875 . T . PASS END=29451875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1311:0,48,255:37,0 chr2 29451876 . G . PASS END=29451886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1349:0,84,255:39,0 chr2 29451887 . C . PASS END=29451887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:29:39:0,29,1253:0,29,255:31,0 chr2 29451888 . C . PASS END=29451896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1327:0,84,255:34,0 chr2 29451897 . G . PASS END=29451898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:39:0,70,1302:0,70,255:30,0 chr2 29451899 . A . PASS END=29451900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:36:0,90,1350:0,92,255:30,0 chr2 29451901 . G . PASS END=29451901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:30,0 chr2 29451902 . G . PASS END=29451902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 29451903 . A . PASS END=29451903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:29,0 chr2 29451904 . A . PASS END=29451904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:6:36:0,6,1100:0,6,255:28,0 chr2 29451905 . G . PASS END=29451905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:30,0 chr2 29451906 . T . PASS END=29451906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:30,0 chr2 29451907 . G . PASS END=29451907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 29451908 . T . PASS END=29451908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr2 29451909 . T . PASS END=29451909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,978:0,46,255:27,0 chr2 29451910 . A . PASS END=29451912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:30,0 chr2 29451913 . A . PASS END=29451913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 29451914 . T . PASS END=29451932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1140:0,80,255:32,0 chr2 29451935 . G . PASS END=29451935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 29451938 . G . PASS END=29451938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 29455170 . C . PASS END=29455184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:31,0 chr2 29455185 . T . PASS END=29455185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr2 29455186 . G . PASS END=29455229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1117:0,93,255:36,0 chr2 29455230 . G . PASS END=29455247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1260:0,91,255:33,0 chr2 29455248 . T . PASS END=29455252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr2 29455253 . C . PASS END=29455253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 29455254 . C . PASS END=29455254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 29455255 . G . PASS END=29455255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 29455256 . T . PASS END=29455266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:26,0 chr2 29455267 . A G, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.123;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:5,9,0:7,6,0:48:85,0,49,506,400,907:255,0,255:11,0:5.0000e+01,6.9375e-05,5.2255e+01,4.5000e+02,4.3511e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,8,7:9,3,8,7 chr2 29455268 . C . PASS END=29455281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 29455282 . A . PASS END=29455282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 29455283 . A . PASS END=29455283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 29455284 . T . PASS END=29455286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 29455287 . T . PASS END=29455289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 29455290 . G . PASS END=29455304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,53,255:19,0 chr2 29455305 . C . PASS END=29455305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 29455306 . A . PASS END=29455315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,513:0,45,255:15,0 chr2 29456425 . C . PASS END=29456426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr2 29456431 . C . PASS END=29456562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,105,1459:0,107,255:40,0 chr2 29462546 . A . PASS END=29462696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1255:0,86,255:40,0 chr2 29462698 . T . PASS END=29462698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 29473966 . C . PASS END=29473967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 29473971 . C . PASS END=29473971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 29473972 . T . PASS END=29473972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 29473973 . G . PASS END=29473977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 29473978 . T . PASS END=29473978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 29473979 . G . PASS END=29473988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 29473989 . G . PASS END=29473989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 29473990 . G . PASS END=29474001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:17,0 chr2 29474002 . T . PASS END=29474002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 29474003 . C . PASS END=29474034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr2 29474035 . C . PASS END=29474042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 29474043 . C . PASS END=29474046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr2 29474047 . G . PASS END=29474061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 29474062 . A . PASS END=29474076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 29474077 . G . PASS END=29474077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:16,0 chr2 29474078 . T . PASS END=29474085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:17,0 chr2 29474086 . T . PASS END=29474087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 29474088 . G . PASS END=29474088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 29474089 . G . LowGQ END=29474089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,565:1,0,255:16,0 chr2 29474090 . G . PASS END=29474101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 29474102 . G . LowGQ END=29474102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:14,0 chr2 29474103 . C . PASS END=29474103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 29474104 . T . PASS END=29474104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr2 29474105 . G . PASS END=29474105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 29474106 . G . PASS END=29474106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29474107 . C . PASS END=29474112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 29474113 . A . PASS END=29474113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 29474114 . T . PASS END=29474114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,429:0,14,255:12,0 chr2 29474115 . G . PASS END=29474116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29474117 . G . PASS END=29474117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 29474118 . G . PASS END=29474119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 29474120 . G . PASS END=29474121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr2 29474122 . A . PASS END=29474122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 29474123 . C . PASS END=29474123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr2 29474124 . A . PASS END=29474129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 29474130 . T . PASS END=29474133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr2 29497960 . C . PASS END=29497960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr2 29497965 . C . PASS END=29498093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:49:0,120,1800:0,124,255:40,0 chr2 29498096 . G . PASS END=29498096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 29498268 . T . PASS END=29498362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,114,1800:0,114,255:40,0 chr2 29519746 . G . PASS END=29519746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 29519748 . G . PASS END=29519748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 29519754 . C . PASS END=29519763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:26,0 chr2 29519764 . C . PASS END=29519913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1036:0,81,255:40,0 chr2 29519914 . A . PASS END=29519924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:29:0,72,1080:0,80,255:26,0 chr2 29519929 . A . PASS END=29519929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 29519932 . G . PASS END=29519932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 29541170 . C . PASS END=29541266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,117,1755:0,124,255:40,0 chr2 29541267 . T . PASS END=29541270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:72:45:0,72,1080:0,135,255:24,0 chr2 29541276 . A . PASS END=29541276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:75:43:0,75,1125:0,129,255:25,0 chr2 29543613 . G . PASS END=29543613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 29543617 . C . PASS END=29543625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1182:0,88,255:36,0 chr2 29543626 . C . PASS END=29543636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1327:0,95,255:36,0 chr2 29543637 . G . PASS END=29543637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:35,0 chr2 29543638 . C . PASS END=29543662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,107,1344:0,107,255:40,0 chr2 29543663 . T C, 41.89 PASS DP=46;MQ=249.94;MQRankSum=4.572;ReadPosRankSum=1.349;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,14,0:0.304,0.000:46:19,11,0:13,3,0:41:77,0,47,177,177,177:255,0,255:32,0:4.1889e+01,3.2462e-04,5.0000e+01,1.7666e+02,2.1143e+02,1.7967e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,14,9,5:19,13,8,6 chr2 29543664 . T . PASS END=29543700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:46:0,95,1783:0,95,255:40,0 chr2 29543701 . C . PASS END=29543748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,102,1530:0,122,255:40,0 chr2 29543751 . A . PASS END=29543751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1395:0,126,255:31,0 chr2 29551215 . C . PASS END=29551347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:80:32:0,80,1161:0,80,255:40,0 chr2 29551352 . A . PASS END=29551352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 29606598 . C . PASS END=29606609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:44:0,93,1552:0,93,255:40,0 chr2 29606610 . T . PASS END=29606610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:57:47:0,57,1238:0,57,255:40,0 chr2 29606611 . C . PASS END=29606726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,111,1665:0,131,255:40,0 chr2 29606735 . T . PASS END=29606735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 29754780 . C . PASS END=29754787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,947:0,62,255:26,0 chr2 29754788 . T . PASS END=29754920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1148:0,86,255:38,0 chr2 29754921 . C . PASS END=29754921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 29754922 . A . PASS END=29754926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 29754927 . C . PASS END=29754965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 29754966 . G . PASS END=29754982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr2 29917713 . T . PASS END=29917713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr2 29917716 . C . PASS END=29917727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 29917728 . C . PASS END=29917769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1024:0,84,255:35,0 chr2 29917770 . G . PASS END=29917770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 29917771 . G . PASS END=29917835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1305:0,95,255:38,0 chr2 29917836 . G . PASS END=29917844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 29917845 . C . PASS END=29917845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 29917846 . C . PASS END=29917869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:26,0 chr2 29917870 . G . PASS END=29917880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:21:0,48,720:0,50,255:18,0 chr2 29917882 . T . PASS END=29917882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 29917885 . A . PASS END=29917885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 29940438 . A . PASS END=29940438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1447:0,90,255:38,0 chr2 29940440 . T . PASS END=29940440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 29940444 . C . PASS END=29940491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,106,1745:0,106,255:40,0 chr2 29940492 . A . PASS END=29940528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,144,255:40,0 chr2 29940529 . A T, 48.31 PASS DP=58;MQ=250.00;MQRankSum=6.433;ReadPosRankSum=3.844;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,24,0:0.414,0.000:58:17,12,0:17,12,0:46:83,0,47,183,183,183:255,0,255:33,0:4.8309e+01,1.0743e-04,5.0000e+01,1.8308e+02,2.1785e+02,1.8609e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,17,13,11:24,10,15,9 chr2 29940530 . G . PASS END=29940563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,143,255:40,0 chr2 30142859 . C . PASS END=30142881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr2 30142882 . A . PASS END=30142884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 30142885 . C . PASS END=30142886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 30142887 . G . PASS END=30142888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 30142889 . G . PASS END=30142889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 30142890 . C . PASS END=30142896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr2 30142897 . G . PASS END=30142905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 30142906 . G . PASS END=30142906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 30142907 . C . PASS END=30142912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 30142913 . A . PASS END=30142913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 30142914 . C . PASS END=30142923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 30142924 . T . PASS END=30142924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 30142925 . C . PASS END=30142933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr2 30142934 . C T, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=2.272;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:5,6,0:6,8,0:48:85,0,49,497,393,890:255,0,255:11,0:5.0000e+01,6.9634e-05,5.2214e+01,4.5000e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,8,6:3,8,8,6 chr2 30142935 . T . PASS END=30142964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:26,0 chr2 30142965 . G . PASS END=30142966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 30142967 . T . PASS END=30142971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 30142972 . A . PASS END=30142976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 30142977 . C . PASS END=30142991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 30142992 . A . PASS END=30142993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 30142994 . T . PASS END=30142995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 30142996 . C . PASS END=30142999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 30143000 . A . PASS END=30143025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1102:0,87,255:30,0 chr2 30143026 . T . PASS END=30143027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 30143028 . G . PASS END=30143028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 30143029 . A . PASS END=30143032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr2 30143033 . G . PASS END=30143044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr2 30143045 . C . PASS END=30143067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 30143068 . C . PASS END=30143128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,668:0,44,255:19,0 chr2 30143129 . G . PASS END=30143129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 30143130 . C . PASS END=30143136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:18,0 chr2 30143137 . C . PASS END=30143137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:17,0 chr2 30143138 . C . PASS END=30143151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,706:0,47,255:19,0 chr2 30143152 . C . PASS END=30143152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 30143153 . T . PASS END=30143153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:19,0 chr2 30143154 . G . PASS END=30143156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 30143157 . C . PASS END=30143183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr2 30143184 . T . PASS END=30143184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 30143185 . G . PASS END=30143193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:19,0 chr2 30143194 . G . PASS END=30143205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr2 30143206 . C . PASS END=30143206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 30143207 . C . PASS END=30143227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 30143228 . T . PASS END=30143228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 30143229 . G . PASS END=30143239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 30143240 . C . PASS END=30143243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:16,0 chr2 30143244 . G . PASS END=30143272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,845:0,67,255:23,0 chr2 30143273 . G . PASS END=30143273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 30143274 . C . PASS END=30143286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 30143287 . A . PASS END=30143287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 30143288 . G . PASS END=30143293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 30143294 . A . PASS END=30143294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:21,0 chr2 30143295 . G . PASS END=30143321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:23,0 chr2 30143322 . G . PASS END=30143322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 30143323 . G . PASS END=30143336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:22,0 chr2 30143337 . G . PASS END=30143337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr2 30143338 . A . PASS END=30143340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 30143341 . G . PASS END=30143341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 30143342 . A . PASS END=30143343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 30143344 . G . PASS END=30143344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 30143345 . G . PASS END=30143349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 30143350 . A . PASS END=30143350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 30143351 . C . PASS END=30143351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 30143352 . G . PASS END=30143352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 30143353 . A . PASS END=30143353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 30143354 . A . PASS END=30143354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,631:0,35,255:21,0 chr2 30143355 . G . PASS END=30143358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:23,0 chr2 30143359 . A . PASS END=30143359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 30143360 . C . PASS END=30143368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 30143369 . T . PASS END=30143378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:19,0 chr2 30143379 . C . PASS END=30143390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 30143391 . G . PASS END=30143403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,607:0,51,255:17,0 chr2 30143404 . C . PASS END=30143404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 30143405 . G . PASS END=30143412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 30143413 . A . PASS END=30143413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 30143414 . G . PASS END=30143415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 30143416 . G . PASS END=30143416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 30143417 . G . PASS END=30143417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 30143418 . C . PASS END=30143420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 30143421 . C . PASS END=30143423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 30143424 . C . PASS END=30143424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 30143425 . G . PASS END=30143425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 30143426 . C . PASS END=30143432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 30143433 . G . PASS END=30143433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 30143434 . G . PASS END=30143434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 30143435 . A . PASS END=30143458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr2 30143459 . T . PASS END=30143461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 30143462 . C . PASS END=30143468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr2 30143469 . C . PASS END=30143469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 30143470 . A . PASS END=30143478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr2 30143479 . G . PASS END=30143480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 30143481 . G . PASS END=30143497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 30143498 . G . PASS END=30143498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr2 30143499 . G C, 46.81 PASS DP=19;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=3.507;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:6,5,0:6,2,0:46:82,0,50,222,427,648:228,0,255:12,0:4.6813e+01,1.1209e-04,5.3000e+01,2.2161e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,2,5:6,6,4,3 chr2 30143500 . A . PASS END=30143525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:19,0 chr2 30143527 . C . PASS END=30143528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 30143586 . G . PASS END=30143586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 30143653 . T . PASS END=30143653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 30143686 . A . PASS END=30143686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 30143801 . C . PASS END=30143801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 30143817 . C . PASS END=30143817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 30143837 . C . PASS END=30143837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 30143901 . C . PASS END=30143901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 30143928 . C . PASS END=30143928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 30143940 . A . PASS END=30143940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 30144015 . G . PASS END=30144015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 30144091 . C . PASS END=30144091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 30144136 . C . PASS END=30144136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 30144149 . G . PASS END=30144149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 30144224 . T . PASS END=30144224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 30144276 . G . PASS END=30144276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 30144351 . G . PASS END=30144351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 30144355 . G . PASS END=30144355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 30144421 . G . PASS END=30144421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 30144447 . G . PASS END=30144447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 30379518 . A . PASS END=30379524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 30379525 . G . PASS END=30379526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 30379527 . A . PASS END=30379527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:19,0 chr2 30379528 . T . PASS END=30379529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 30379530 . T . PASS END=30379530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 30379531 . T . PASS END=30379544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:26,0 chr2 30379545 . G . PASS END=30379545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 30379546 . G . PASS END=30379547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr2 30379548 . G . PASS END=30379625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:32:0,89,1169:0,89,255:40,0 chr2 30379626 . G . PASS END=30379626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr2 30379627 . G . PASS END=30379644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:33:0,90,1350:0,99,255:37,0 chr2 30379645 . T . PASS END=30379647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:29,0 chr2 30379648 . T . PASS END=30379654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1117:0,80,255:29,0 chr2 30379655 . C . PASS END=30379658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 30381485 . G . PASS END=30381493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr2 30381494 . C . PASS END=30381498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 30381499 . G . PASS END=30381499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 30381500 . T . PASS END=30381500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 30381501 . A . PASS END=30381501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 30381502 . C . PASS END=30381502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 30381503 . A . PASS END=30381503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 30381504 . G . PASS END=30381507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 30381508 . A . PASS END=30381508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr2 30381509 . G . PASS END=30381518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,808:0,66,255:26,0 chr2 30381519 . G . PASS END=30381581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:30:0,83,1170:0,83,255:40,0 chr2 30381582 . T . PASS END=30381582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1421:0,60,255:38,0 chr2 30381583 . G . PASS END=30381684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1215:0,90,255:40,0 chr2 30381685 . G . PASS END=30381703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:25,0 chr2 30381704 . T . PASS END=30381704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,703:0,55,255:21,0 chr2 30381705 . C . PASS END=30381706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 30381707 . T . PASS END=30381707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 30381708 . G . PASS END=30381708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 30381709 . A . PASS END=30381709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 30454605 . A . PASS END=30454615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 30454616 . T . PASS END=30454616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 30454617 . T . PASS END=30454621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 30454622 . C . PASS END=30454622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 30454623 . A . PASS END=30454629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 30454630 . G . PASS END=30454630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr2 30454927 . A . PASS END=30454930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 30454931 . A . PASS END=30454939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 30454940 . A . PASS END=30454940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr2 30454941 . T . PASS END=30454943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 30454944 . G . PASS END=30454950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:11,0 chr2 30454951 . T . PASS END=30454951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 30454952 . G . PASS END=30454959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 30454960 . C . PASS END=30454961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 30454962 . C . PASS END=30454962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 30454963 . G . PASS END=30454980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr2 30454981 . G C, 47.05 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,4,0:0.333,0.000:12:4,2,0:4,2,0:46:82,0,50,143,286,429:133,0,255:8,0:4.7048e+01,1.0743e-04,5.3000e+01,1.4304e+02,3.2079e+02,4.3210e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,3,1:4,4,3,1 chr2 30454982 . G . PASS END=30454992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr2 30454993 . T . PASS END=30454993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr2 30454994 . C . PASS END=30454994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 30454995 . T . PASS END=30454995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 30454996 . T . PASS END=30455000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 30455001 . G . PASS END=30455001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 30455002 . G . LowGQ END=30455002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr2 30455003 . C . PASS END=30455004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,377:0,39,255:13,0 chr2 30455005 . C . PASS END=30455005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 30455006 . C . PASS END=30455009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr2 30455010 . T . PASS END=30455010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 30455011 . C . PASS END=30455012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 30455013 . T . PASS END=30455013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 30455014 . T . PASS END=30455014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 30455015 . T . LowGQ END=30455015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:12,0 chr2 30455016 . T . PASS END=30455017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 30455018 . T . PASS END=30455018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 30455019 . T . PASS END=30455019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 30455020 . T . PASS END=30455020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 30455021 . T . PASS END=30455021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 30455022 . T . PASS END=30455022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 30455023 . G . PASS END=30455023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 30455024 . T . PASS END=30455024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 30455025 . T . PASS END=30455025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 30455026 . T . LowGQ END=30455026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,382:0,0,255:12,0 chr2 30455027 . G . PASS END=30455055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 30455056 . G . LowGQ END=30455056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,372:3,0,255:10,0 chr2 30455057 . C . PASS END=30455061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr2 30455062 . G . PASS END=30455064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 30455065 . C . PASS END=30455066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:18:13:0,18,270:0,39,255:6,0 chr2 30455067 . G . PASS END=30455071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:11:0,21,315:0,33,255:7,0 chr2 30455072 . G . PASS END=30455072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:7,0 chr2 30455073 . G . PASS END=30455079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr2 30455080 . C . PASS END=30455088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,243:6,0 chr2 30455089 . T . LowGQ END=30455090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:4,0 chr2 30455091 . C . PASS END=30455091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 30455092 . A . LowGQ END=30455095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:7:0,0,186:7,0,204:5,0 chr2 30455096 . C . PASS END=30455096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 30455097 . T . LowGQ END=30455097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:18,0,204:5,0 chr2 30455098 . C . PASS END=30455099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,233:6,0 chr2 30455100 . G . LowGQ END=30455113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:6:0,0,86:0,0,133:5,0 chr2 30455114 . C . PASS END=30455114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 30455115 . G . LowGQ END=30455119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,131:0,0,165:5,0 chr2 30455120 . A . PASS END=30455131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:9,0 chr2 30455132 . C . PASS END=30455144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 30455145 . T . LowGQ END=30455147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:13:0,0,397:0,0,255:14,1 chr2 30455148 . A . PASS END=30455148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 30455149 . G . PASS END=30455149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 30455150 . C . PASS END=30455157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:16,0 chr2 30455158 . A . PASS END=30455158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 30455159 . G . PASS END=30455166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr2 30455167 . C . PASS END=30455167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 30455168 . G . PASS END=30455171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:18,0 chr2 30455172 . T . PASS END=30455172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr2 30455173 . G . PASS END=30455195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,611:0,40,255:19,0 chr2 30455196 . T . PASS END=30455196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 30455197 . C . PASS END=30455197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 30455198 . C . PASS END=30455201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 30455202 . G . PASS END=30455202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 30455203 . C . PASS END=30455205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 30455206 . C . PASS END=30455209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 30455210 . A . PASS END=30455211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 30455212 . A . PASS END=30455212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:19,0 chr2 30455213 . C . PASS END=30455216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 30455217 . C . PASS END=30455219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 30455220 . A . PASS END=30455228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 30455229 . G . PASS END=30455230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 30455231 . G . PASS END=30455231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 30455232 . G . PASS END=30455232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 30455233 . C . PASS END=30455233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 30455234 . C . PASS END=30455263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 30455264 . T . PASS END=30455303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr2 30457271 . C . PASS END=30457377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:45:0,120,1800:0,122,255:40,0 chr2 30480299 . A . PASS END=30480431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:32:0,85,1126:0,85,255:40,0 chr2 30480432 . A . PASS END=30480432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr2 30480433 . G . PASS END=30480439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr2 30480440 . G . PASS END=30480440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:25,0 chr2 30480441 . A . PASS END=30480471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,894:0,68,255:26,0 chr2 30480472 . A . PASS END=30480472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 30480473 . A . PASS END=30480487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr2 30546385 . G . PASS END=30546402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1282:0,105,255:37,0 chr2 30682479 . A . PASS END=30682588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,86,255:40,0 chr2 30699268 . C . PASS END=30699271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:22,0 chr2 30699272 . T . PASS END=30699272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 30699273 . C . PASS END=30699277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr2 30699278 . T . PASS END=30699278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 30699279 . C . PASS END=30699281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 30699282 . T . PASS END=30699282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 30699283 . T . PASS END=30699285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 30699286 . A . PASS END=30699286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 30699287 . T . PASS END=30699296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 30699297 . A . PASS END=30699297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr2 30699298 . T . PASS END=30699309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:23,0 chr2 30699310 . C . PASS END=30699310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 30699311 . T . PASS END=30699311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 30699312 . C . PASS END=30699313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr2 30699314 . G . PASS END=30699318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 30699319 . G . PASS END=30699335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr2 30699336 . T . PASS END=30699336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 30699337 . T . PASS END=30699342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 30699343 . A . PASS END=30699343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 30699344 . A . PASS END=30699348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:16,0 chr2 30699349 . G . PASS END=30699354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr2 30699355 . A . PASS END=30699355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,476:0,9,255:10,0 chr2 30699356 . T . PASS END=30699358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,495:0,31,255:11,0 chr2 30748453 . A . PASS END=30748618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:31:0,87,1219:0,88,255:40,0 chr2 30748619 . G . PASS END=30748619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr2 30748620 . T . PASS END=30748621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 30755982 . G . PASS END=30756158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:33:0,85,1091:0,85,255:40,0 chr2 30756159 . C . PASS END=30756185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1260:0,96,255:37,0 chr2 30775359 . C . PASS END=30775471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:42:0,119,1681:0,119,255:40,0 chr2 30785012 . G . PASS END=30785158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:37:0,103,1366:0,103,255:40,0 chr2 30790926 . A . PASS END=30791042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:60:0,120,1800:0,164,255:40,0 chr2 30792516 . G . PASS END=30792521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:91:0,120,1800:0,255,255:40,0 chr2 30792522 . A . PASS END=30792532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,200,255:40,0 chr2 30862983 . G . PASS END=30862989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 30862990 . C . PASS END=30862992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 30862993 . T . PASS END=30862993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 30862994 . G . PASS END=30863003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:36,0 chr2 30863004 . A . PASS END=30863004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr2 30863005 . T . PASS END=30863485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:39:0,102,1423:0,107,255:40,0 chr2 30953626 . T . PASS END=30953652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,163,255:40,0 chr2 30954210 . C . PASS END=30954265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:35:0,91,1266:0,91,255:38,0 chr2 30955304 . T . PASS END=30955330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr2 30955331 . A . PASS END=30955331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 30955332 . G . PASS END=30955338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 30955339 . A . PASS END=30955339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 30955340 . G . PASS END=30955348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr2 30955349 . A . PASS END=30955349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 30955350 . G . PASS END=30955372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:25,0 chr2 30955373 . T . PASS END=30955374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 30955375 . T . PASS END=30955386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:23,0 chr2 30955387 . A . PASS END=30955387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 30955388 . C . PASS END=30955404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr2 30955405 . C . PASS END=30955425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,704:0,44,255:19,0 chr2 30955426 . A . PASS END=30955426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:16,0 chr2 30955427 . G . PASS END=30955432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr2 30957315 . C . PASS END=30957390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:38:0,98,1378:0,98,255:40,0 chr2 30959369 . C . PASS END=30959403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,120,1800:0,128,255:40,0 chr2 30959404 . A . PASS END=30959437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,121,255:40,0 chr2 30961068 . T . PASS END=30961159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:35:0,85,1270:0,85,255:40,0 chr2 30961266 . C . PASS END=30961269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 30961270 . T . PASS END=30961270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 30961271 . A . PASS END=30961279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 30961280 . T . PASS END=30961280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 30961281 . G . PASS END=30961285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 30961286 . A . PASS END=30961286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 30961287 . G . PASS END=30961287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 30961288 . A . PASS END=30961288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:28,0 chr2 30961289 . A . PASS END=30961323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1156:0,83,255:34,0 chr2 30964774 . C . PASS END=30964830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,108,1604:0,113,255:40,0 chr2 30965192 . C . PASS END=30965225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,136,255:40,0 chr2 30966249 . C . PASS END=30966445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:39:0,90,1380:0,90,255:40,0 chr2 30968589 . C . PASS END=30968600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr2 30971221 . C . PASS END=30971286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:36:0,89,1219:0,89,255:40,0 chr2 30973969 . C . PASS END=30974117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:39:0,101,1396:0,101,255:40,0 chr2 30975919 . C . PASS END=30976064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,147,255:40,0 chr2 30977156 . C . PASS END=30977230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,3:72:99:62:0,120,1800:0,162,255:40,0 chr2 30980912 . C . PASS END=30980917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,676:0,57,255:19,0 chr2 30980918 . C . PASS END=30980939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:24,0 chr2 30980940 . C T, 46.42 PASS DP=24;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=2.743;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:10,3,0:5,6,0:46:81,0,50,285,528,813:216,0,255:15,0:4.6423e+01,1.2063e-04,5.3000e+01,2.8507e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,6,3:2,13,4,5 chr2 30980941 . C . PASS END=30980947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr2 30980948 . C . PASS END=30980948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 30980949 . A . PASS END=30980971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,909:0,75,255:25,0 chr2 30980972 . A . PASS END=30980972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr2 30980973 . T . PASS END=30980973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 30980974 . A . PASS END=30980974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr2 30980975 . A . PASS END=30980977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 30980978 . T . PASS END=30980992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 30980993 . C . PASS END=30981003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr2 30985948 . C . PASS END=30985949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 30985950 . G . PASS END=30985961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 30985962 . T . PASS END=30985962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 30985963 . C . PASS END=30985966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,861:0,69,255:25,0 chr2 30985967 . G . PASS END=30986009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 30986010 . C . PASS END=30986022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr2 30986998 . C . PASS END=30987026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1067:0,93,255:40,0 chr2 30987027 . A . PASS END=30987132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1249:0,89,255:40,0 chr2 30987133 . G . PASS END=30987133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr2 30987134 . A . PASS END=30987147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:32,0 chr2 30987148 . C . PASS END=30987150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 30987151 . A . PASS END=30987151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:24,0 chr2 30987152 . T . PASS END=30987172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 30993179 . T . PASS END=30993315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:97:38:0,97,1252:0,97,255:40,0 chr2 30998796 . C . PASS END=30998889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:40:0,90,1346:0,90,255:40,0 chr2 30998890 . G . PASS END=30998890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:35,0 chr2 30998891 . C . PASS END=30998911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:38:0,82,1260:0,82,255:37,0 chr2 31000433 . C . PASS END=31000493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1006:0,82,255:39,0 chr2 31000494 . C . PASS END=31000497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 31000498 . G . PASS END=31000505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1193:0,86,255:29,0 chr2 31009994 . C . PASS END=31010002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 31010003 . C . PASS END=31010014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 31010015 . A . PASS END=31010033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,723:0,63,255:23,0 chr2 31010034 . T . PASS END=31010034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 31010035 . G . PASS END=31010037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr2 31010038 . G . PASS END=31010038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 31010039 . C . PASS END=31010044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 31010045 . C . PASS END=31010049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 31010050 . C . PASS END=31010071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr2 31010072 . G . PASS END=31010078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 31010079 . T . PASS END=31010079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 31010080 . C . PASS END=31010088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 31010089 . A . PASS END=31010089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 31010090 . C . PASS END=31010119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:29,0 chr2 31010120 . C . PASS END=31010159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:24,0 chr2 31010160 . G . PASS END=31010174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 31010175 . T . PASS END=31010191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr2 31133767 . T . PASS END=31133774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 31133775 . T . PASS END=31133775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,975:0,40,255:24,0 chr2 31133776 . C . PASS END=31133780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 31133781 . T . PASS END=31133781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 31133782 . G . PASS END=31133813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:30:0,84,1096:0,84,255:40,0 chr2 31133814 . A . PASS END=31133814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1435:0,79,255:40,0 chr2 31133815 . T . PASS END=31133851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,99,1499:0,99,255:40,0 chr2 31133852 . T . PASS END=31133852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1476:0,77,255:38,0 chr2 31133853 . C . PASS END=31133872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,101,1372:0,101,255:40,0 chr2 31133873 . A . PASS END=31133873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1243:0,59,255:33,0 chr2 31133874 . G . PASS END=31133908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,89,255:36,0 chr2 31133909 . C . PASS END=31133909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 31133910 . C . PASS END=31133920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 31133921 . C . PASS END=31133921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr2 31133922 . A . PASS END=31133925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 31135089 . C . PASS END=31135089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1255:0,75,255:34,0 chr2 31135090 . T . PASS END=31135092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1289:0,105,255:36,0 chr2 31135093 . C . PASS END=31135093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr2 31135094 . G . PASS END=31135197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1238:0,84,255:40,0 chr2 31135198 . A . PASS END=31135198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 31135199 . A . PASS END=31135199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 31135200 . G . PASS END=31135200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 31135201 . G . PASS END=31135208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 31146985 . C . PASS END=31147129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:37:0,93,1305:0,93,255:40,0 chr2 31147606 . C . PASS END=31147614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,901:0,64,255:26,0 chr2 31147615 . G . PASS END=31147624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1013:0,90,255:32,0 chr2 31147625 . T . PASS END=31147625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1075:0,63,255:32,0 chr2 31147626 . C . PASS END=31147682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,86,255:35,0 chr2 31147683 . C . PASS END=31147687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr2 31147688 . C . PASS END=31147689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 31152261 . T . PASS END=31152274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:18,0 chr2 31152275 . C . PASS END=31152294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 31152295 . C . PASS END=31152296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 31152297 . G . PASS END=31152300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 31152301 . A . PASS END=31152301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 31152302 . A . PASS END=31152305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 31152306 . T . PASS END=31152306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:21,0 chr2 31152307 . A . PASS END=31152312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:22,0 chr2 31152313 . T . PASS END=31152313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr2 31152314 . G . PASS END=31152323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,756:0,66,255:22,0 chr2 31152324 . A . PASS END=31152325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 31152326 . C . PASS END=31152327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 31152328 . A . PASS END=31152328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 31152329 . C . PASS END=31152329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 31152330 . A . PASS END=31152330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr2 31152331 . C . PASS END=31152342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:20,0 chr2 31152343 . G . PASS END=31152353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr2 31154934 . T . PASS END=31154934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,889:0,78,255:26,0 chr2 31154935 . T . PASS END=31154941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr2 31154942 . C . PASS END=31154942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 31154943 . G . PASS END=31154945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 31154946 . T . PASS END=31154946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,983:0,73,255:29,0 chr2 31154947 . T . PASS END=31154986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1008:0,90,255:32,0 chr2 31154987 . G . PASS END=31154987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 31154988 . A . PASS END=31154988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 31154989 . A . PASS END=31154989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr2 31154990 . G . PASS END=31155016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:31,0 chr2 31155017 . G . PASS END=31155031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:27:0,65,976:0,65,255:26,0 chr2 31155032 . C . PASS END=31155032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr2 31155033 . C . PASS END=31155040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,961:0,75,255:25,0 chr2 31155041 . C . PASS END=31155041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 31155042 . C . PASS END=31155042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 31155043 . A . PASS END=31155043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:19,0 chr2 31155044 . C . PASS END=31155045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 31155046 . C . PASS END=31155060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,621:0,40,255:17,0 chr2 31165067 . C . PASS END=31165170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:42:0,93,1395:0,96,255:40,2 chr2 31167724 . C . PASS END=31167730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 31167731 . G . PASS END=31167731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 31167732 . C . PASS END=31167748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,886:0,72,255:26,0 chr2 31167749 . G . PASS END=31167749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr2 31167750 . C . PASS END=31167808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,929:0,62,255:26,0 chr2 31168649 . C . PASS END=31168736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,146,255:40,0 chr2 31178484 . C . PASS END=31178487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 31178488 . T . PASS END=31178488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 31178489 . T . PASS END=31178495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,678:0,60,255:25,0 chr2 31178496 . G . PASS END=31178500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 31178501 . A . PASS END=31178501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 31178502 . C . PASS END=31178507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 31178508 . C . PASS END=31178515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 31178516 . A . PASS END=31178516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr2 31178517 . G . PASS END=31178554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1133:0,83,255:33,0 chr2 31178555 . G . PASS END=31178556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 31178557 . G . PASS END=31178601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1019:0,84,255:30,0 chr2 31178602 . A . PASS END=31178605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 31178778 . C . PASS END=31178843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:50:0,120,1800:0,141,255:40,0 chr2 31181263 . G . PASS END=31181330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:57:0,120,1800:0,171,255:40,0 chr2 31189070 . C . PASS END=31189078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 31189079 . G . PASS END=31189168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:37:0,105,1421:0,111,255:40,0 chr2 31215704 . C . PASS END=31215704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 31215705 . T . PASS END=31215706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 31215707 . A . PASS END=31215707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 31215708 . G . PASS END=31215708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 31215709 . A . PASS END=31215709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:28,0 chr2 31215710 . T . PASS END=31215838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1149:0,80,255:36,0 chr2 31215839 . T . PASS END=31215861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 31215862 . A . PASS END=31215869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 31215870 . A . PASS END=31215870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:17,0 chr2 31215871 . A . PASS END=31215872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr2 31215873 . G . PASS END=31215873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:18,0 chr2 31247514 . G . PASS END=31247514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 31249427 . T . PASS END=31249427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 31301800 . T . PASS END=31301961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:84:47:0,84,1532:0,84,255:40,0 chr2 31337609 . C . PASS END=31337693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:55:0,120,1800:0,162,255:40,0 chr2 31348020 . C . PASS END=31348021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 31348022 . G . PASS END=31348119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,978:0,81,255:39,0 chr2 31355561 . C . PASS END=31355561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 31355562 . T . PASS END=31355578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,848:0,75,255:25,0 chr2 31360824 . C . PASS END=31360824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 31360825 . T . PASS END=31360829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,631:0,57,255:19,0 chr2 31360830 . G . PASS END=31360836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 31360837 . A . PASS END=31360837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 31360838 . C . PASS END=31360846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 31360847 . C . PASS END=31360847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 31360848 . C . PASS END=31360849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 31360850 . T . PASS END=31360850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 31360851 . C . PASS END=31360853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 31360854 . C . PASS END=31360856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 31360857 . C . PASS END=31360866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr2 31360867 . C . PASS END=31360884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:29,0 chr2 31360885 . A . PASS END=31360886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 31360887 . C . PASS END=31360889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 31360890 . C . PASS END=31360937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,921:0,62,255:26,0 chr2 31360938 . A . PASS END=31360938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 31360939 . G . PASS END=31360939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 31360940 . T . PASS END=31360940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 31360941 . C . PASS END=31360943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 31360944 . G . PASS END=31360944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 31360945 . C . PASS END=31360948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 31360949 . G . PASS END=31360949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 31360950 . C . PASS END=31360952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 31397547 . T . PASS END=31397573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,157,255:40,0 chr2 31399453 . C . PASS END=31399508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,148,255:40,0 chr2 31399892 . C . PASS END=31399894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 31399895 . C . PASS END=31399895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 31399896 . C . PASS END=31399903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:19,0 chr2 31399904 . C . PASS END=31399919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr2 31399920 . G . PASS END=31399920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 31399921 . T . PASS END=31399930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr2 31399931 . T . PASS END=31399931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 31399932 . G . PASS END=31399936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 31399937 . A . PASS END=31399937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 31399938 . G . PASS END=31399946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 31399947 . G . PASS END=31399948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr2 31399949 . G . PASS END=31399950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 31399951 . C . PASS END=31399956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 31399957 . C . PASS END=31399961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,751:0,47,255:19,0 chr2 31399962 . G . PASS END=31399982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 31399983 . A . PASS END=31399987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 31399988 . C T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=2.659;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,11,0:0.550,0.000:20:5,3,0:4,8,0:48:85,0,50,385,322,707:255,0,255:8,0:5.0000e+01,6.7563e-05,5.2569e+01,3.8542e+02,3.5669e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,4,7:7,2,6,5 chr2 31399989 . G . PASS END=31400008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:19,0 chr2 31400612 . C . PASS END=31400627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1255:0,89,255:35,0 chr2 31400628 . A . PASS END=31400628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:29,0 chr2 31400629 . G . PASS END=31400684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1186:0,83,255:35,0 chr2 31400685 . C . PASS END=31400687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 31401377 . C . PASS END=31401445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:52:0,115,1688:0,115,255:40,0 chr2 31403802 . G . PASS END=31403811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,105,1575:0,111,255:38,0 chr2 31403812 . G . PASS END=31403812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1373:0,73,255:38,0 chr2 31403813 . C . PASS END=31403841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,104,1457:0,104,255:40,0 chr2 31403842 . A . PASS END=31403866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:45:0,96,1598:0,96,255:40,0 chr2 31409294 . T . PASS END=31409351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,179,255:40,0 chr2 31410624 . C . PASS END=31410652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:88:0,120,1800:0,217,255:40,0 chr2 31410653 . C T, 50.00 PASS DP=91;MQ=250.00;MQRankSum=8.158;ReadPosRankSum=1.115;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,47,0:0.522,0.000:90:17,27,0:26,20,0:48:85,0,50,1670,1477,3147:255,0,255:40,0:5.0000e+01,6.6269e-05,5.2807e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,21,21,26:20,23,19,28 chr2 31410654 . C . PASS END=31410680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,218,255:40,0 chr2 31411184 . C A, 46.04 PASS DP=67;MQ=250.00;MQRankSum=6.800;ReadPosRankSum=3.779;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,25,0:0.373,0.000:67:22,12,0:20,13,0:45:81,0,47,181,181,181:255,0,255:40,0:4.6039e+01,1.5144e-04,5.0000e+01,1.8081e+02,2.1558e+02,1.8382e+02:0.00,34.77,37.78,34.77,69.54,37.78:28,14,18,7:24,18,15,10 chr2 31411185 . T . PASS END=31411220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:68:0,120,1800:0,149,255:40,0 chr2 31412139 . T . PASS END=31412143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 31412144 . G . PASS END=31412144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 31412145 . A . PASS END=31412156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 31412157 . G . PASS END=31412157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr2 31412158 . A . PASS END=31412165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr2 31412166 . C . PASS END=31412166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 31412167 . T . PASS END=31412170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 31412171 . G . PASS END=31412174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 31412175 . A . PASS END=31412179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,872:0,64,255:26,0 chr2 31412180 . T . PASS END=31412193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr2 31412194 . C . PASS END=31412194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 31412195 . C . PASS END=31412209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr2 31412210 . C . PASS END=31412215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,1149:0,60,255:26,0 chr2 31412216 . G . PASS END=31412216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:27,0 chr2 31412217 . A . PASS END=31412217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1084:0,52,255:24,0 chr2 31412218 . G . PASS END=31412248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1197:0,88,255:35,0 chr2 31412249 . A . PASS END=31412249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:33,0 chr2 31412250 . C . PASS END=31412255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1319:0,105,255:35,0 chr2 31412256 . T . PASS END=31412256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:31,0 chr2 31412257 . C . PASS END=31412291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1194:0,83,255:35,0 chr2 31412292 . G . PASS END=31412292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:27,0 chr2 31412293 . G . PASS END=31412299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr2 31412300 . T . PASS END=31412300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:27,0 chr2 31412301 . C . PASS END=31412305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 31412306 . G . PASS END=31412306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 31412307 . A . PASS END=31412307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 31412308 . A . PASS END=31412309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 31412310 . A . PASS END=31412329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:24,0 chr2 31412330 . C . PASS END=31412330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 31412331 . T . PASS END=31412333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 31412334 . T . PASS END=31412344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,49,255:18,0 chr2 31414265 . C . PASS END=31414272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:84:61:0,84,1260:0,134,255:35,0 chr2 31414273 . T . PASS END=31414273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:78:61:0,78,1170:0,150,255:24,0 chr2 31414801 . C . PASS END=31414806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:23,0 chr2 31414807 . C G, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,11,0:0,15,0:75:163,78,0,991,78,991:255,78,0:0,0:1.2525e+02,7.5247e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,6:0,0,15,11 chr2 31414808 . A . PASS END=31414814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr2 31414815 . A . PASS END=31414844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:34,0 chr2 31414845 . G . PASS END=31414865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1296:0,95,255:37,0 chr2 31414866 . G . PASS END=31414866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:35,0 chr2 31414867 . G . PASS END=31414889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,102,1530:0,111,255:37,0 chr2 31414890 . A . PASS END=31414890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr2 31414891 . G . PASS END=31414961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1186:0,83,255:37,0 chr2 31414962 . T . PASS END=31414964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr2 31415997 . C . PASS END=31415998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr2 31415999 . T . PASS END=31415999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 31416000 . G . PASS END=31416009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 31416010 . C . PASS END=31416010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 31416011 . C . PASS END=31416011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 31416012 . T . PASS END=31416013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:27,0 chr2 31416014 . T . PASS END=31416016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1033:0,49,255:25,0 chr2 31416017 . C . PASS END=31416018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 31416019 . A . PASS END=31416019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr2 31416020 . C . PASS END=31416022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 31416023 . G . PASS END=31416023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr2 31416024 . C . PASS END=31416024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 31416025 . T . PASS END=31416025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr2 31416026 . G . PASS END=31416027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 31416028 . G . PASS END=31416028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:27,0 chr2 31416029 . C . PASS END=31416029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 31416030 . T . PASS END=31416030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 31416031 . C . PASS END=31416031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 31416032 . C . PASS END=31416033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,984:0,68,255:27,0 chr2 31416034 . C . PASS END=31416034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 31416035 . T . PASS END=31416035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 31416036 . T . PASS END=31416036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 31416037 . C . PASS END=31416037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 31416038 . T . PASS END=31416038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 31416039 . C . PASS END=31416039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 31416040 . C . PASS END=31416045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1093:0,93,255:31,0 chr2 31416046 . C . PASS END=31416046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 31416047 . C . PASS END=31416115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1164:0,85,255:36,0 chr2 31416116 . A . PASS END=31416138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 31416139 . T . PASS END=31416139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,746:0,55,255:20,0 chr2 31416140 . T . PASS END=31416142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 31416143 . A . PASS END=31416160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,43,255:19,0 chr2 31417275 . C . PASS END=31417334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1260:0,98,255:39,0 chr2 31417335 . T . PASS END=31417335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1147:0,55,255:27,0 chr2 31417336 . C . PASS END=31417336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 31417337 . C . PASS END=31417342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr2 31417343 . A . PASS END=31417344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 31417345 . T . PASS END=31417347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1039:0,71,255:26,0 chr2 31417348 . A . PASS END=31417349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 31420115 . C . PASS END=31420142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,104,1385:0,104,255:40,0 chr2 31420143 . C T, 49.59 PASS DP=47;MQ=249.27;MQRankSum=5.852;ReadPosRankSum=4.786;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,22,0:0.468,0.000:47:13,10,0:12,12,0:48:84,0,50,750,886,1636:255,0,255:24,0:4.9594e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,9,13:12,13,15,7 chr2 31420144 . C . PASS END=31420180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,128,255:40,0 chr2 31420181 . G . PASS END=31420200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,110,1449:0,110,255:40,0 chr2 31422336 . C . PASS END=31422398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:41:0,84,1369:0,84,255:40,0 chr2 31423317 . C . PASS END=31423453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1305:0,103,255:40,0 chr2 31423454 . C . PASS END=31423478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr2 31423479 . G . PASS END=31423479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 31423480 . G . PASS END=31423482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 31423483 . C . PASS END=31423483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:21,0 chr2 31423484 . C . PASS END=31423490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 31423491 . C . PASS END=31423491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 31424728 . T . PASS END=31424728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr2 31424729 . T . PASS END=31424729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 31424730 . G . PASS END=31424847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1133:0,80,255:40,0 chr2 31424848 . T . PASS END=31424848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1064:0,52,255:28,0 chr2 31424849 . T . PASS END=31424860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1194:0,83,255:31,0 chr2 31424861 . A . PASS END=31424864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:26,0 chr2 31425000 . C . PASS END=31425099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:35:0,98,1307:0,98,255:40,0 chr2 31425100 . G . PASS END=31425100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:34,0 chr2 31425101 . C . PASS END=31425118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:34:0,80,1215:0,80,255:35,0 chr2 31425936 . C . PASS END=31426005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:43:0,97,1533:0,97,255:40,0 chr2 31428089 . C . PASS END=31428091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 31428092 . G . PASS END=31428092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 31428093 . G . PASS END=31428095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 31428096 . C . PASS END=31428121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:26,0 chr2 31428122 . C . PASS END=31428139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:29,0 chr2 31428140 . A . PASS END=31428140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 31428141 . C . PASS END=31428259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1133:0,80,255:34,0 chr2 31428260 . A . PASS END=31428260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:29,0 chr2 31428261 . G . PASS END=31428276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1101:0,82,255:31,0 chr2 31428277 . G . PASS END=31428277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 31428278 . C . PASS END=31428307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr2 31428308 . A . PASS END=31428313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1055:0,74,255:27,0 chr2 31457488 . A . PASS END=31457503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,831:0,66,255:26,0 chr2 31457504 . G . PASS END=31457537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:30,0 chr2 31457538 . T . PASS END=31457538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr2 31457539 . T . PASS END=31457583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1155:0,83,255:32,0 chr2 31457584 . C . PASS END=31457588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1008:0,71,255:26,0 chr2 31457589 . G . PASS END=31457590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 31457591 . C . PASS END=31457610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr2 31457611 . T . PASS END=31457611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr2 31457612 . T . PASS END=31457626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr2 31457627 . C . PASS END=31457627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 31457628 . G . PASS END=31457635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 31457636 . T . PASS END=31457638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:19,0 chr2 31457639 . A . PASS END=31457639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 31457640 . G . PASS END=31457663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,44,255:19,0 chr2 31457664 . C . PASS END=31457664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:13,0 chr2 31457665 . A . PASS END=31457672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:14:0,32,549:0,32,255:13,0 chr2 31457673 . G . PASS END=31457673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 31457674 . C . PASS END=31457674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 31457675 . T . PASS END=31457675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 31457676 . G . PASS END=31457677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 31457678 . T . PASS END=31457681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 31457682 . C . PASS END=31457693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 31457694 . T . PASS END=31457696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 31457697 . G . PASS END=31457702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 31457703 . C . PASS END=31457703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 31457704 . A . PASS END=31457706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 31457707 . T . PASS END=31457710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr2 31457711 . T . PASS END=31457711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:6,0 chr2 31457712 . C . PASS END=31457714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 31467140 . G . PASS END=31467165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:26,0 chr2 31467166 . G . PASS END=31467313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,1016:0,81,255:40,0 chr2 31467314 . C . PASS END=31467316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 31472237 . G . PASS END=31472318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:36:0,93,1313:0,93,255:40,0 chr2 31472319 . C . PASS END=31472319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:34,0 chr2 31472320 . A . PASS END=31472334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:35,0 chr2 31483376 . G . PASS END=31483377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 31483378 . T . PASS END=31483378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr2 31483379 . A . PASS END=31483395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,819:0,62,255:26,0 chr2 31483396 . C . PASS END=31483404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:29,0 chr2 31483405 . T . PASS END=31483405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,842:0,53,255:27,0 chr2 31483406 . T . PASS END=31483440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1056:0,80,255:33,0 chr2 31483441 . G . PASS END=31483441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr2 31483442 . A . PASS END=31483662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1008:0,80,255:40,0 chr2 31483663 . A . PASS END=31483663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1267:0,76,255:35,0 chr2 31483664 . T . PASS END=31483725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:35:0,84,1165:0,84,255:40,0 chr2 31483726 . C . PASS END=31483726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr2 31483727 . T . PASS END=31483750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr2 31483751 . A . PASS END=31483751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:24,0 chr2 31483752 . G . PASS END=31483759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,80,255:25,0 chr2 31483760 . A . PASS END=31483760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:23,0 chr2 31483761 . C . PASS END=31483768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 31483769 . A . PASS END=31483769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:23,0 chr2 31483770 . A . PASS END=31483783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,779:0,61,255:26,0 chr2 31483784 . C . PASS END=31483788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:25:0,45,855:0,45,255:19,0 chr2 31484415 . G . PASS END=31484425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,892:0,72,255:26,0 chr2 31484426 . C . PASS END=31484575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1057:0,84,255:40,0 chr2 31484576 . G . PASS END=31484576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 31484577 . C . PASS END=31484579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:29,0 chr2 31489043 . G . PASS END=31489054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 31489055 . G . PASS END=31489077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr2 31489078 . G . PASS END=31489078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 31489079 . C . PASS END=31489095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 31489096 . G . PASS END=31489144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,939:0,69,255:26,0 chr2 31489145 . G . PASS END=31489146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 31489147 . G . PASS END=31489147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 31489148 . C . PASS END=31489148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 31489149 . T . PASS END=31489149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 31489150 . A . PASS END=31489161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 31489162 . G . PASS END=31489162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 31489163 . G . PASS END=31489535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1177:0,80,255:40,0 chr2 31489536 . T . PASS END=31489536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1321:0,57,255:32,0 chr2 31489537 . C . PASS END=31489547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:38:0,98,1456:0,98,255:37,0 chr2 31489548 . C . PASS END=31489548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1288:0,37,255:31,0 chr2 31489549 . C . PASS END=31489549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 31489550 . A . PASS END=31489550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:31,0 chr2 31489551 . A . PASS END=31489555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1355:0,95,255:33,0 chr2 31489556 . A . PASS END=31489556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1176:0,74,255:33,0 chr2 31489557 . A . PASS END=31489557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1120:0,88,255:32,0 chr2 31489558 . A . PASS END=31489558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:32,0 chr2 31489559 . G . PASS END=31489562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1180:0,85,255:32,0 chr2 31489563 . C . PASS END=31489563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1086:0,69,255:28,0 chr2 31489564 . C . PASS END=31489565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,86,255:28,0 chr2 31489566 . A . PASS END=31489566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:25,0 chr2 31489567 . G . PASS END=31489570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,89,255:29,0 chr2 31557223 . C . PASS END=31557223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 31557330 . T . PASS END=31557330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:25,0 chr2 31557333 . T . PASS END=31557333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 31557372 . G . PASS END=31557372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 31557407 . T . PASS END=31557407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1189:0,88,255:34,0 chr2 31557417 . G . PASS END=31557417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1410:0,111,255:37,0 chr2 31557486 . C . PASS END=31557486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 31557560 . C . PASS END=31557560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 31557604 . G . PASS END=31557604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 31557641 . A . PASS END=31557641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 31557730 . T . PASS END=31557730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 31557762 . A . PASS END=31557762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:31,0 chr2 31558092 . A . PASS END=31558093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 31558125 . G . PASS END=31558125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 31558130 . A . PASS END=31558131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,150,255:40,0 chr2 31558138 . T . PASS END=31558138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 31558150 . G . PASS END=31558150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 31558196 . T . PASS END=31558196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 31558349 . T . PASS END=31558349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:34,0 chr2 31558387 . G . PASS END=31558387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 31558420 . G . PASS END=31558420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 31558453 . G . PASS END=31558453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 31558516 . G . PASS END=31558516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 31558604 . C . PASS END=31558604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 31558719 . G . PASS END=31558719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 31558781 . A . PASS END=31558781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 31558818 . C . PASS END=31558818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 31558824 . T . PASS END=31558874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,169,255:40,0 chr2 31560507 . C . PASS END=31560679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:35:0,85,1282:0,85,255:40,0 chr2 31560680 . C . PASS END=31560680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:30,0 chr2 31560681 . A . PASS END=31560683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr2 31562340 . C . PASS END=31562340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 31562355 . C . PASS END=31562517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1243:0,90,255:40,0 chr2 31562518 . A . PASS END=31562543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr2 31564195 . C . PASS END=31564261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,146,255:40,0 chr2 31565049 . C . PASS END=31565049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 31565050 . T . PASS END=31565050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 31565051 . T . PASS END=31565055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 31565056 . T . PASS END=31565056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 31565057 . C . PASS END=31565058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 31565059 . C . PASS END=31565163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,997:0,80,255:40,0 chr2 31567550 . C . PASS END=31567602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,128,255:40,0 chr2 31569635 . C . PASS END=31569709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,111,1531:0,111,255:40,0 chr2 31569711 . T . PASS END=31569711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 31569721 . A . PASS END=31569721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1559:0,113,255:38,0 chr2 31569723 . C . PASS END=31569723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 31570382 . C . PASS END=31570382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 31570388 . A . PASS END=31570413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1161:0,80,255:40,0 chr2 31570414 . C . PASS END=31570516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1156:0,83,255:40,0 chr2 31570520 . C . PASS END=31570520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 31570935 . T . PASS END=31570949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,131,255:40,0 chr2 31571134 . C . PASS END=31571134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 31571135 . T . PASS END=31571135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:28,0 chr2 31571136 . G . PASS END=31571155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 31571156 . C . PASS END=31571156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 31571157 . C . PASS END=31571161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 31571162 . C . PASS END=31571165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 31571166 . T . PASS END=31571168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 31571169 . C . PASS END=31571197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,900:0,67,255:26,0 chr2 31571198 . C . PASS END=31571203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,72,255:18,0 chr2 31571204 . G . PASS END=31571205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr2 31571206 . G . PASS END=31571206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:16,0 chr2 31571207 . T . PASS END=31571219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 31571220 . G . PASS END=31571223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 31571224 . T . PASS END=31571229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 31571233 . G . PASS END=31571233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 31571765 . C . PASS END=31571785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,212,255:40,0 chr2 31571786 . A G, 307.92 PASS DP=87;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,87,0:1.000,0.000:87:0,46,0:0,41,0:258:346,261,0,3299,261,3299:255,255,0:0,0:3.0792e+02,2.5792e+02,0.0000e+00,4.4853e+02,2.9269e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,64,23:0,0,51,36 chr2 31571787 . A . PASS END=31571823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:87:0,120,1800:0,195,255:40,0 chr2 31571824 . C . PASS END=31571846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:84:0,120,1800:0,167,255:40,0 chr2 31572552 . T . PASS END=31572556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 31572557 . G . PASS END=31572559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 31572560 . C . PASS END=31572560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 31572561 . T . PASS END=31572561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 31572562 . T . PASS END=31572562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:25,0 chr2 31572563 . G . PASS END=31572568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 31572569 . C . PASS END=31572569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 31572570 . T . PASS END=31572573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:29,0 chr2 31572574 . T . PASS END=31572574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 31572575 . C . PASS END=31572577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 31572578 . C . PASS END=31572578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr2 31572579 . C . PASS END=31572579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 31572580 . G . PASS END=31572581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 31572582 . G . PASS END=31572697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:34:0,98,1250:0,98,255:40,0 chr2 31572895 . T . PASS END=31572895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 31572898 . C . PASS END=31572905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,945:0,65,255:26,0 chr2 31572906 . C . PASS END=31572977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1062:0,80,255:36,0 chr2 31572978 . A . PASS END=31572978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 31572979 . G . PASS END=31572979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1013:0,57,255:24,0 chr2 31572980 . C . PASS END=31572985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1092:0,74,255:26,0 chr2 31572986 . A . PASS END=31572989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 31572990 . C . PASS END=31572993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,939:0,67,255:26,0 chr2 31572994 . G . PASS END=31572995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 31572996 . T . PASS END=31573016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr2 31573017 . A . PASS END=31573017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 31573018 . C . PASS END=31573018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 31573019 . A . PASS END=31573022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 31573023 . G . PASS END=31573029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr2 31573030 . G . PASS END=31573030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 31573031 . C . PASS END=31573033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,603:0,60,255:20,0 chr2 31573034 . C . PASS END=31573057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,601:0,43,255:19,0 chr2 31573058 . T . PASS END=31573062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 31573063 . C . PASS END=31573063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr2 31573064 . A . PASS END=31573080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 31573081 . T . PASS END=31573082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 31573083 . C . PASS END=31573085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 31573086 . T . PASS END=31573086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 31573087 . A . PASS END=31573088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 31573089 . T . PASS END=31573089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 31578969 . A C, 293.34 PASS DP=83;MQ=250.00;FractionInformativeReads=0.988 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,82,0:1.000,0.000:82:0,29,0:0,53,0:243:331,246,0,3142,246,3142:255,249,0:0,0:2.9334e+02,2.4334e+02,0.0000e+00,4.5000e+02,2.7811e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,44,38:0,0,45,37 chr2 31587024 . A . PASS END=31587110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,108,1557:0,110,255:40,0 chr2 31588323 . C . PASS END=31588325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 31588326 . G . PASS END=31588410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,126,255:40,0 chr2 31588561 . A C, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,10,0:0,13,0:66:154,69,0,882,69,882:255,69,0:0,0:1.1622e+02,6.6220e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,14:0,0,12,11 chr2 31588842 . T . PASS END=31588975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:35:0,81,1333:0,81,255:40,0 chr2 31588985 . A . PASS END=31588985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,117,1755:0,138,255:39,0 chr2 31589736 . C . PASS END=31589860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1215:0,87,255:40,0 chr2 31589867 . A . PASS END=31589867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 31590827 . C . PASS END=31590923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,102,1530:0,130,255:40,0 chr2 31591407 . C . PASS END=31591526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:37:0,90,1350:0,111,255:40,0 chr2 31593221 . C . PASS END=31593344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:61:0,120,1800:0,149,255:40,0 chr2 31595084 . T . PASS END=31595084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 31595087 . C . PASS END=31595087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 31595094 . T . PASS END=31595096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 31595097 . A . PASS END=31595126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:22,0 chr2 31595127 . A . PASS END=31595127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 31595128 . G . PASS END=31595164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,704:0,66,255:23,0 chr2 31595165 . G . PASS END=31595165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr2 31595166 . T . PASS END=31595166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 31595167 . C . PASS END=31595233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr2 31595234 . G . PASS END=31595234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr2 31595235 . T . PASS END=31595263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 31595271 . G . PASS END=31595271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 31596738 . C . PASS END=31596822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,114,1710:0,134,255:40,0 chr2 31598245 . C . PASS END=31598246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 31598247 . T . PASS END=31598247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:27,0 chr2 31598248 . C . PASS END=31598259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,983:0,87,255:29,0 chr2 31598260 . C . PASS END=31598260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 31598261 . T . PASS END=31598281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1180:0,85,255:33,0 chr2 31598282 . T . PASS END=31598282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr2 31598283 . G . PASS END=31598303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:33,0 chr2 31598304 . A . PASS END=31598304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1032:0,66,255:28,0 chr2 31598305 . A . PASS END=31598306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr2 31598307 . C . PASS END=31598307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 31598308 . T . PASS END=31598334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:31:0,89,1257:0,89,255:36,0 chr2 31598335 . C . PASS END=31598335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr2 31598336 . C . PASS END=31598408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1147:0,80,255:39,0 chr2 31598409 . T . PASS END=31598410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 31598411 . C . PASS END=31598420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:29,0 chr2 31599919 . T . PASS END=31599927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1280:0,102,255:35,0 chr2 31599928 . T . PASS END=31599928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:33,0 chr2 31599929 . G . PASS END=31600099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1211:0,84,255:40,0 chr2 31600100 . C . PASS END=31600103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:31:0,69,1035:0,77,255:24,0 chr2 31600110 . G . PASS END=31600110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr2 31602726 . A . PASS END=31602726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 31602733 . C . PASS END=31602842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:28:0,84,1055:0,84,255:40,0 chr2 31604488 . A . PASS END=31604488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:35,0 chr2 31604499 . C . PASS END=31604592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,111,1507:0,111,255:40,0 chr2 31605860 . G . PASS END=31605860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 31605867 . C . PASS END=31605867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1388:0,108,255:36,0 chr2 31605868 . G . PASS END=31605868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 31605869 . C . PASS END=31606018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:38:0,102,1462:0,107,255:40,0 chr2 31606621 . C . PASS END=31606713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:42:0,86,1361:0,86,255:40,0 chr2 31609280 . C . PASS END=31609409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1157:0,87,255:40,0 chr2 31609410 . G . PASS END=31609410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 31609411 . T . PASS END=31609421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr2 31609426 . G . PASS END=31609426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 31610677 . C . PASS END=31610683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,115,1545:0,115,255:40,0 chr2 31610684 . T . PASS END=31610763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,102,1499:0,102,255:40,0 chr2 31611093 . T . PASS END=31611161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:57:0,120,1800:0,158,255:40,0 chr2 31620519 . G . PASS END=31620519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 31620521 . G . PASS END=31620521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 31620534 . C . PASS END=31620595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1194:0,83,255:40,0 chr2 31621439 . C . PASS END=31621463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1172:0,85,255:34,0 chr2 31621464 . C . PASS END=31621464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:33,0 chr2 31621465 . A . PASS END=31621508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1188:0,85,255:35,0 chr2 31621509 . G . PASS END=31621509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr2 31621510 . A . PASS END=31621522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:32,0 chr2 31621523 . T . PASS END=31621524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 31621525 . C . PASS END=31621525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 31621526 . A . PASS END=31621536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,77,255:26,0 chr2 31621537 . T . PASS END=31621540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 31621541 . A . PASS END=31621542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 31621543 . C . PASS END=31621544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 31621545 . G . PASS END=31621545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 31621546 . T . PASS END=31621548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 31621549 . C . PASS END=31621565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,887:0,78,255:26,0 chr2 31624086 . C . PASS END=31624194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:29:0,87,1116:0,87,255:40,0 chr2 31625914 . A . PASS END=31625920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr2 31625921 . T . PASS END=31625921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 31625922 . G . PASS END=31625925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 31625926 . T . PASS END=31625926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 31625927 . G . PASS END=31625938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:23,0 chr2 31625939 . A . PASS END=31625939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 31625940 . C . PASS END=31625971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr2 31625972 . C . PASS END=31626002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,630:0,41,255:16,0 chr2 31626003 . C . PASS END=31626010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 31628773 . A . PASS END=31628830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,123,255:40,0 chr2 31637491 . C . PASS END=31637532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,138,255:40,0 chr2 31749762 . T . PASS END=31749762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 31749774 . T . PASS END=31749774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 31749826 . A . PASS END=31749826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 31749844 . C . PASS END=31749844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1527:0,120,255:40,0 chr2 31749882 . T . PASS END=31749882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 31749976 . G . PASS END=31749976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 31750024 . T . PASS END=31750024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 31750113 . TA T,TAA, 11.23 PASS DP=23;MQ=250.00;MQRankSum=3.940;ReadPosRankSum=-1.379;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:11,1,10,0:0.045,0.455,0.000:22:6,1,4,0:5,0,6,0:11:19,62,112,0,73,50,44,133,68,113:255,0,255:11,18:1.1226e+01,6.1897e+01,1.1490e+02,3.4048e-01,8.1518e+01,5.3152e+01,7.1515e+01,1.6800e+02,1.0344e+02,1.4284e+02:0.00,8.00,11.00,8.00,16.00,11.00,34.77,42.77,42.77,37.77:5,6,6,5:6,5,4,7 chr2 31750133 . T . PASS END=31750133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:23,0 chr2 31750580 . C . PASS END=31750580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 31750594 . A . PASS END=31750594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 31750652 . A . PASS END=31750652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 31750694 . G . PASS END=31750694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 31750756 . A . PASS END=31750756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 31750874 . T . PASS END=31750874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:30,0 chr2 31750959 . T . PASS END=31750959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1335:0,95,255:32,0 chr2 31750980 . T . PASS END=31750980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:33,0 chr2 31750988 . G . PASS END=31750988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 31751146 . C . PASS END=31751146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr2 31751147 . G . PASS END=31751147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:31,0 chr2 31751175 . G . PASS END=31751175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 31751266 . T . PASS END=31751332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,134,255:40,0 chr2 31754377 . C . PASS END=31754527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:32:0,82,1081:0,82,255:40,0 chr2 31754529 . T . PASS END=31754529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 31754532 . G . PASS END=31754532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 31754536 . A . PASS END=31754536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr2 31756441 . C . PASS END=31756520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:85:34:0,85,1188:0,85,255:40,0 chr2 31756521 . C . PASS END=31756521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:31,0 chr2 31756522 . C . PASS END=31756523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1166:0,85,255:33,0 chr2 31756524 . A . PASS END=31756524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1137:0,69,255:31,0 chr2 31756525 . A . PASS END=31756529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1186:0,86,255:31,0 chr2 31756530 . A . PASS END=31756530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1174:0,74,255:31,0 chr2 31756531 . A . PASS END=31756539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:31,0 chr2 31756540 . C . PASS END=31756541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:30,0 chr2 31756542 . C . PASS END=31756542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:29,0 chr2 31756549 . A . PASS END=31756549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 31758673 . C . PASS END=31758674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 31758675 . A . PASS END=31758679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1108:0,84,255:29,0 chr2 31758680 . A . PASS END=31758683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1094:0,77,255:27,0 chr2 31758684 . C . PASS END=31758767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:31:0,84,1260:0,92,255:40,0 chr2 31758768 . G . PASS END=31758768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1474:0,63,255:38,0 chr2 31758769 . C . PASS END=31758798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1350:0,87,255:40,0 chr2 31758799 . A . PASS END=31758799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:28,0 chr2 31758800 . A . PASS END=31758809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 31758810 . C . PASS END=31758811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 31758812 . A . PASS END=31758814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 31758815 . G . PASS END=31758816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 31758817 . G . PASS END=31758817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:24,0 chr2 31758818 . C . PASS END=31758832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:25,0 chr2 31758833 . T . PASS END=31758836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 31758838 . T . PASS END=31758838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr2 31783523 . T . PASS END=31783581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,176,255:40,0 chr2 31805690 . C . PASS END=31805699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 31805700 . A . PASS END=31805702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 31805703 . G . PASS END=31805705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 31805706 . G C, 89.14 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,2,0:0,12,0:39:127,42,0,543,42,543:255,42,0:0,0:8.9137e+01,3.9137e+01,5.2992e-04,4.5000e+02,7.3907e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,2:0,0,4,10 chr2 31805707 . G . PASS END=31805720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr2 31805721 . G . PASS END=31805743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 31805744 . A . PASS END=31805752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:15,0 chr2 31805753 . A . PASS END=31805754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 31805755 . G . PASS END=31805783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,660:0,51,255:19,0 chr2 31805784 . C . PASS END=31805784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 31805785 . C . PASS END=31805786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 31805787 . C . PASS END=31805788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 31805789 . A . PASS END=31805799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,765:0,50,255:19,0 chr2 31805800 . C . PASS END=31805829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,878:0,72,255:24,0 chr2 31805830 . C . PASS END=31805837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:19,0 chr2 31805838 . T . PASS END=31805842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:16,0 chr2 31805843 . G . PASS END=31805843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:14,0 chr2 31805844 . C . PASS END=31805849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:15,0 chr2 31805850 . T . PASS END=31805851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:30:23:0,30,450:0,69,255:11,0 chr2 31805852 . A . PASS END=31805857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:21:23:0,21,315:0,69,255:9,0 chr2 31805858 . T . PASS END=31805859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:15:26:0,15,225:0,78,255:5,0 chr2 31805860 . C . LowGQ END=31805879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:23,0:23:0:23:0,0,0:0,69,255:3,0 chr2 31805880 . A AG, 116.21 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,8,0:0,15,0:66:148,69,0,812,69,812:255,69,0:0,31:1.1621e+02,6.6207e+01,1.0354e-06,4.5000e+02,1.0098e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,9,14:0,0,12,11 chr2 31805881 . G . LowGQ END=31805881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,23:23:0:23:0,0,0:255,69,0:23,0 chr2 31805882 . G . PASS END=31805889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 31805890 . A . PASS END=31805917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr2 31805918 . C . PASS END=31805923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 31805924 . T . PASS END=31805929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 31805930 . T . PASS END=31805930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 31805931 . G . PASS END=31805932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 31805933 . C . PASS END=31805934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 31805935 . G . PASS END=31805945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,540:0,31,255:15,0 chr2 31805946 . G . PASS END=31805947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 31805948 . T . PASS END=31805948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 31805949 . C . PASS END=31805969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,592:0,48,255:17,0 chr2 31805989 . G . PASS END=31805989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 31806033 . T . PASS END=31806033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 31871387 . C . PASS END=31871412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,192,255:40,0 chr2 32093430 . T . PASS END=32093449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:25,0 chr2 32093450 . C . PASS END=32093450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 32093451 . A . PASS END=32093462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,886:0,68,255:26,0 chr2 32093463 . C . PASS END=32093468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:29,0 chr2 32093469 . A . PASS END=32093469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 32093470 . C . PASS END=32093470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 32093471 . T . PASS END=32093471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr2 32093472 . G . PASS END=32093489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,920:0,87,255:30,0 chr2 32093490 . C . PASS END=32093490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:26,0 chr2 32093491 . T . PASS END=32093497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:26,0 chr2 32093498 . A . PASS END=32093498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 32093499 . C . PASS END=32093532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,878:0,61,255:26,0 chr2 32093533 . A . PASS END=32093533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 32093534 . T . PASS END=32093545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 32093546 . G . PASS END=32093561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr2 32094917 . A . PASS END=32094972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,107,1504:0,107,255:40,0 chr2 32094973 . A . PASS END=32095003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:88:52:0,88,1485:0,88,255:40,0 chr2 32095004 . T . PASS END=32095005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:66:49:0,66,990:0,131,255:22,0 chr2 32095006 . C . PASS END=32095006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:58:49:0,58,1432:0,58,255:18,0 chr2 32095007 . T . PASS END=32095009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:63:48:0,63,945:0,111,255:21,0 chr2 32095010 . A . PASS END=32095021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:48:31:0,48,720:0,54,255:19,0 chr2 32108455 . C . PASS END=32108531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,111,1582:0,113,255:40,0 chr2 32117061 . C . PASS END=32117174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:57:0,120,1800:0,138,255:40,0 chr2 32117175 . C . PASS END=32117191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,99,1485:0,121,255:40,0 chr2 32117192 . T . PASS END=32117192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1350:0,68,255:31,0 chr2 32117193 . C . PASS END=32117203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:38:0,81,1227:0,81,255:31,0 chr2 32142995 . C . PASS END=32142997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32142998 . T . PASS END=32142998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 32142999 . C . PASS END=32142999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32143000 . C . PASS END=32143000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 32143001 . A . PASS END=32143001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32143002 . T . PASS END=32143002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 32143003 . G . PASS END=32143103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1055:0,82,255:40,0 chr2 32143104 . A . PASS END=32143106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:62:32:0,62,944:0,62,255:26,0 chr2 32145867 . T . PASS END=32145979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:98:38:0,98,1372:0,98,255:40,0 chr2 32148713 . T . PASS END=32148803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:80:0,120,1800:0,240,255:40,0 chr2 32157136 . G . PASS END=32157186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:44:0,93,1395:0,116,255:40,0 chr2 32157187 . T . PASS END=32157204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:22:0,63,756:0,66,255:22,0 chr2 32168371 . G . PASS END=32168452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,120,1800:0,148,255:40,0 chr2 32188241 . C . PASS END=32188310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:142,2:144:99:111:0,120,1800:0,255,255:40,0 chr2 32235256 . C . PASS END=32235312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 32235313 . A . PASS END=32235316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 32235779 . C . LowGQ END=32235794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr2 32235795 . G . PASS END=32235795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 32235796 . C . LowGQ END=32235796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 32235797 . C . PASS END=32235798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr2 32235799 . T . LowGQ END=32235799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 32235800 . C . PASS END=32235815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 32235816 . C . PASS END=32235826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 32235827 . G . PASS END=32235831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr2 32235832 . G . PASS END=32235832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 32235833 . C . PASS END=32235834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr2 32235835 . C . PASS END=32235835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 32235836 . C . PASS END=32235837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 32235838 . C . PASS END=32235858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,1 chr2 32235859 . T . PASS END=32235859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 32235860 . T . PASS END=32235865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,1 chr2 32235866 . C . PASS END=32235866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:16:17:0,16,563:0,16,255:16,1 chr2 32235867 . G . PASS END=32235872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 32235873 . C . PASS END=32235874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 32235875 . G . PASS END=32235894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:19,0 chr2 32235895 . G . PASS END=32235907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 32235908 . C . PASS END=32235955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,637:0,43,255:19,0 chr2 32235956 . G . PASS END=32235956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 32235957 . G . PASS END=32235968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:17,0 chr2 32235969 . A . PASS END=32235969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,576:0,18,255:15,0 chr2 32235970 . C . PASS END=32235970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 32235971 . C . PASS END=32235971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr2 32235972 . G . PASS END=32235975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 32235976 . A . PASS END=32235993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,35,255:14,0 chr2 32235994 . A . PASS END=32235994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr2 32235995 . G . PASS END=32236000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 32236001 . G . PASS END=32236001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 32236002 . C . PASS END=32236041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 32236042 . A . PASS END=32236043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 32248540 . T . PASS END=32248543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,209,255:40,0 chr2 32248742 . T . PASS END=32248877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,102,1636:0,102,255:40,0 chr2 32249253 . T . PASS END=32249325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:73:0,120,1800:0,196,255:40,0 chr2 32254663 . C . PASS END=32254671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 32254672 . G . PASS END=32254672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:24,0 chr2 32254673 . C . PASS END=32254673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 32254674 . A . PASS END=32254805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:28:0,81,1049:0,84,255:40,0 chr2 32264348 . C . PASS END=32264395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1342:0,102,255:39,0 chr2 32264490 . C . PASS END=32264525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1343:0,87,255:40,0 chr2 32288681 . G . PASS END=32288681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 32288725 . C . PASS END=32288725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1225:0,99,255:33,0 chr2 32288733 . G . PASS END=32288733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 32288787 . C . PASS END=32288787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1101:0,80,255:29,0 chr2 32288796 . C . PASS END=32288796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 32288811 . C . PASS END=32288811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 32288894 . G . PASS END=32288894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 32288901 . A . PASS END=32288903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 32288904 . A . PASS END=32288904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:22,0 chr2 32288905 . A . PASS END=32288909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 32288910 . C . PASS END=32288910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 32288911 . C . PASS END=32288912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,881:0,78,255:26,0 chr2 32288913 . G . PASS END=32288915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 32288916 . G . PASS END=32288924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 32288925 . A . PASS END=32288925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:22,0 chr2 32288926 . A . PASS END=32288931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr2 32288932 . A . PASS END=32288932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 32288933 . A . PASS END=32288934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 32288935 . G . PASS END=32288935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr2 32288936 . C . PASS END=32288936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 32288937 . T . PASS END=32288958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:25,0 chr2 32288959 . T . PASS END=32288992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,627:0,40,255:18,0 chr2 32288993 . C . PASS END=32288993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr2 32288994 . G . PASS END=32289013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr2 32289014 . G . PASS END=32289014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 32289015 . G . PASS END=32289016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 32289017 . C . PASS END=32289017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:13,0 chr2 32289018 . C . PASS END=32289018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 32289019 . C . PASS END=32289019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:12,0 chr2 32289020 . T . PASS END=32289020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 32289021 . C . PASS END=32289023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 32289024 . C . PASS END=32289034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr2 32289035 . G . PASS END=32289035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:14,0 chr2 32289036 . C . PASS END=32289036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 32289037 . A . PASS END=32289049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,553:0,40,255:18,0 chr2 32289050 . G . PASS END=32289051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 32289052 . A . PASS END=32289052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 32289053 . C . PASS END=32289053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:19,0 chr2 32289054 . T . PASS END=32289054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:21,0 chr2 32289055 . A . PASS END=32289057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 32289058 . T . PASS END=32289058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,684:0,36,255:19,0 chr2 32289059 . C . PASS END=32289059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 32289060 . T . PASS END=32289061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 32289062 . C . PASS END=32289063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 32289064 . A . PASS END=32289064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 32289065 . C . PASS END=32289068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 32289069 . C . PASS END=32289088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,621:0,40,255:19,0 chr2 32289089 . G . PASS END=32289089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 32289090 . C . PASS END=32289132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr2 32289133 . T . PASS END=32289137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 32289138 . C . PASS END=32289139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 32289140 . G . PASS END=32289146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 32289147 . T . PASS END=32289147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:20,0 chr2 32289148 . C . PASS END=32289149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 32289150 . C . PASS END=32289150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 32289151 . G . PASS END=32289151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 32289152 . C . PASS END=32289153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 32289154 . C . PASS END=32289158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 32289159 . A . PASS END=32289159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 32289160 . T . PASS END=32289162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 32289163 . C . PASS END=32289172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr2 32289173 . G . PASS END=32289173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 32289174 . A . PASS END=32289197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr2 32289198 . G . PASS END=32289198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,623:0,29,255:14,0 chr2 32289199 . C . PASS END=32289204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 32289205 . C . PASS END=32289205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:13,0 chr2 32289206 . C . PASS END=32289206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 32289207 . T . PASS END=32289207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 32289208 . C . PASS END=32289210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 32289211 . C . PASS END=32289211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:17:17:0,17,407:0,17,255:13,0 chr2 32289212 . C . PASS END=32289214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 32289215 . G . LowGQ END=32289215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,372:2,0,255:12,0 chr2 32289216 . G . PASS END=32289216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr2 32289217 . C . PASS END=32289217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 32289218 . G . PASS END=32289218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 32289219 . C . PASS END=32289219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:13,0 chr2 32289220 . C . PASS END=32289220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 32289221 . G . PASS END=32289221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:13,0 chr2 32289222 . G . PASS END=32289222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 32289223 . T . PASS END=32289223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,468:0,31,255:14,0 chr2 32289224 . G . PASS END=32289225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 32289226 . C . PASS END=32289226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:14,0 chr2 32289227 . G . PASS END=32289227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:13,0 chr2 32289228 . G . PASS END=32289228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 32289229 . G . PASS END=32289229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr2 32289230 . C . PASS END=32289232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 32289233 . C . PASS END=32289233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr2 32289234 . G . PASS END=32289235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 32289236 . G . PASS END=32289236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 32289237 . G . PASS END=32289237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 32289238 . C . PASS END=32289238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr2 32289239 . C . PASS END=32289240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr2 32289241 . A . PASS END=32289241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr2 32289242 . G . PASS END=32289244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr2 32289245 . C . PASS END=32289245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 32289246 . G . PASS END=32289248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr2 32289249 . C . PASS END=32289250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 32289251 . A . PASS END=32289255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 32289256 . T . LowGQ END=32289257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,352:0,0,255:14,0 chr2 32289258 . C . PASS END=32289258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 32289259 . A . PASS END=32289259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 32289260 . C . PASS END=32289261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr2 32289262 . A . PASS END=32289263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 32289264 . C . LowGQ END=32289264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,396:10,0,255:13,0 chr2 32289265 . A . PASS END=32289265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 32289266 . G . LowGQ END=32289266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,341:5,0,255:12,0 chr2 32289267 . G . PASS END=32289267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:12,0 chr2 32289268 . C . PASS END=32289269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 32289270 . T . PASS END=32289270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,332:0,25,255:9,0 chr2 32289271 . T . PASS END=32289271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 32289272 . C . PASS END=32289272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,357:0,9,255:9,0 chr2 32289273 . G . PASS END=32289274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:9,0 chr2 32289275 . G . LowGQ END=32289276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,347:0,0,255:9,0 chr2 32289277 . A . PASS END=32289278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 32289279 . A . PASS END=32289280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 32289281 . C . PASS END=32289281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 32289282 . T . PASS END=32289282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 32289283 . C . PASS END=32289285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 32289286 . T . PASS END=32289287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr2 32289288 . G . LowGQ END=32289288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,247:0,0,248:7,0 chr2 32289289 . C . PASS END=32289290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 32289291 . C . PASS END=32289291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr2 32289292 . T . LowGQ END=32289292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:7,0 chr2 32289293 . G . PASS END=32289294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 32289295 . G . PASS END=32289295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr2 32289296 . C . LowGQ END=32289297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:11:0,0,249:0,0,255:8,0 chr2 32289298 . T . PASS END=32289300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,272:0,13,255:8,0 chr2 32289301 . A . LowGQ END=32289301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:7,0 chr2 32289302 . T . PASS END=32289302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 32289303 . G . LowGQ END=32289306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,139:6,0,184:5,0 chr2 32289307 . A . PASS END=32289308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 32289309 . G . LowGQ END=32289309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:4,0,245:6,0 chr2 32289310 . A . PASS END=32289310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 32289311 . G . LowGQ END=32289311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,4:9:0:9:0,0,61:84,0,145:3,0 chr2 32289312 . A . PASS END=32289315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:7:0,12,180:0,21,205:6,0 chr2 32289316 . G . LowGQ END=32289316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,124:26,0,151:2,0 chr2 32302898 . T . PASS END=32302908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:31,0 chr2 32312561 . C . PASS END=32312647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,114,1710:0,125,255:40,0 chr2 32314591 . G . PASS END=32314674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:60:0,120,1800:0,174,255:40,0 chr2 32314677 . A . PASS END=32314677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 32314679 . C . PASS END=32314679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 32323865 . A . PASS END=32323960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,155,255:40,0 chr2 32339692 . C . PASS END=32339692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 32339706 . G . PASS END=32339709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 32339710 . G . PASS END=32339712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 32339713 . G . PASS END=32339713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 32339714 . A . PASS END=32339716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 32339717 . T . PASS END=32339717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 32339718 . G . PASS END=32339734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,797:0,66,255:25,0 chr2 32339735 . C . PASS END=32339889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,1215:0,84,255:40,0 chr2 32339890 . A . PASS END=32339895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:38:0,69,1035:0,83,255:26,0 chr2 32340769 . A . PASS END=32340905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:46:0,111,1665:0,138,255:40,0 chr2 32341183 . C . PASS END=32341183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 32341187 . G . PASS END=32341260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:71:0,120,1800:0,182,255:40,0 chr2 32341261 . C . LowGQ END=32341261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,19:95:0:95:0,0,2245:59,0,255:40,0 chr2 32341262 . T . PASS END=32341282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,204,255:40,0 chr2 32341286 . G . PASS END=32341286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,208,255:40,0 chr2 32352017 . T . PASS END=32352092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:34:0,86,1218:0,86,255:40,0 chr2 32353475 . A . PASS END=32353549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,154,255:40,0 chr2 32353552 . A . PASS END=32353553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 32361632 . G . PASS END=32361707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,156,255:40,0 chr2 32361944 . A . PASS END=32361944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr2 32361946 . A . PASS END=32362038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:83:0,120,1800:0,209,255:40,0 chr2 32362042 . G . PASS END=32362042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr2 32362177 . G . PASS END=32362258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:70:0,120,1800:0,192,255:40,0 chr2 32366968 . T . PASS END=32366968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr2 32366971 . A . PASS END=32367002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:77:0,120,1800:0,205,255:40,0 chr2 32367003 . A . PASS END=32367016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:84:0,120,1800:0,222,255:40,0 chr2 32367020 . G . PASS END=32367020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr2 32368394 . A . PASS END=32368394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 32368404 . G . PASS END=32368485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,120,1800:0,167,255:40,0 chr2 32370004 . A . PASS END=32370076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:43:0,96,1543:0,96,255:40,0 chr2 32370091 . G . PASS END=32370091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 32372264 . T . PASS END=32372328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:86:0,120,1800:0,231,255:40,0 chr2 32379441 . A . PASS END=32379565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:85:53:0,85,1800:0,85,255:40,0 chr2 32379576 . T . PASS END=32379576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 32379722 . A . PASS END=32379722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 32379760 . T . PASS END=32379760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 32379784 . C . PASS END=32379784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 32379935 . A . PASS END=32379935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 32379947 . G . PASS END=32379947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 32380043 . G . PASS END=32380043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 32380059 . C . PASS END=32380059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 32380086 . A . PASS END=32380086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,154,255:40,0 chr2 32380098 . T . PASS END=32380098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 32380361 . T . PASS END=32380361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr2 32380380 . C . PASS END=32380380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 32380457 . T . PASS END=32380457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 32380594 . G . PASS END=32380594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 32380796 . C . PASS END=32380796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 32380844 . G . PASS END=32380844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 32380941 . A . PASS END=32380941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 32381041 . A . PASS END=32381041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:77:0,120,1800:0,215,255:40,0 chr2 32381761 . A . PASS END=32381761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 32381887 . T . PASS END=32381887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 32382069 . A . PASS END=32382069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 32382223 . A . PASS END=32382223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 32382237 . T . PASS END=32382237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 32382302 . G . PASS END=32382302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 32382344 . G . PASS END=32382344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 32382463 . C . PASS END=32382463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 32382469 . C . PASS END=32382469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 32382485 . T . PASS END=32382485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 32382552 . G . PASS END=32382552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 32382563 . C . PASS END=32382563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 32390970 . A . PASS END=32390972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,119,1598:0,119,255:40,0 chr2 32396356 . G . PASS END=32396442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:60:0,120,1800:0,175,255:40,0 chr2 32399132 . T . PASS END=32399216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:84:0,120,1800:0,228,255:40,0 chr2 32400388 . C . PASS END=32400430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:83:0,120,1800:0,249,255:40,0 chr2 32409342 . T . PASS END=32409407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,179,255:40,0 chr2 32412221 . G . PASS END=32412232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,820:0,72,255:25,0 chr2 32412233 . C . PASS END=32412233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 32412234 . T . PASS END=32412234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 32412235 . G . PASS END=32412274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1034:0,80,255:31,0 chr2 32412275 . A . PASS END=32412275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr2 32412276 . T . PASS END=32412284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 32412285 . A . PASS END=32412305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,71,255:26,0 chr2 32417405 . G . PASS END=32417485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,120,1800:0,142,255:40,0 chr2 32417987 . T . PASS END=32418022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:79:0,120,1800:0,235,255:40,0 chr2 32418958 . G . PASS END=32419052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:61:0,120,1800:0,175,255:40,0 chr2 32422413 . C . PASS END=32422461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:61:0,120,1800:0,158,255:40,0 chr2 32422776 . C . PASS END=32422895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:66:0,120,1800:0,160,255:40,0 chr2 32423035 . G . PASS END=32423056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,255,255:40,0 chr2 32429659 . T . PASS END=32429761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:96:36:0,96,1308:0,96,255:40,0 chr2 32431955 . A . PASS END=32432002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:37:0,93,1390:0,93,255:40,0 chr2 32434562 . G . PASS END=32434630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,148,255:40,0 chr2 32435923 . A . PASS END=32435926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr2 32435927 . A . PASS END=32435928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 32435929 . T . PASS END=32435929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 32435930 . T . PASS END=32435933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 32435934 . A . PASS END=32435934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 32435935 . C . PASS END=32435939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr2 32435940 . A . PASS END=32435940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 32435966 . G . PASS END=32435977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 32435978 . C . PASS END=32435978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 32435979 . A . PASS END=32435999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1023:0,84,255:28,0 chr2 32436000 . A . PASS END=32436014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,939:0,67,255:26,0 chr2 32436015 . C . PASS END=32436015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:22,0 chr2 32436016 . C . PASS END=32436030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,64,255:23,0 chr2 32445282 . G . PASS END=32445293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:33:0,99,1235:0,99,255:38,0 chr2 32445294 . C . PASS END=32445294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr2 32445295 . A . PASS END=32445553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:39:0,84,1325:0,84,255:40,0 chr2 32445554 . A . PASS END=32445554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:53:38:0,53,1243:0,53,255:33,0 chr2 32445555 . T . PASS END=32445782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:37:0,84,1313:0,84,255:40,0 chr2 32449542 . T . PASS END=32449809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:34:0,89,1239:0,89,255:40,1 chr2 32449810 . A . PASS END=32449810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:29,0 chr2 32449811 . G . PASS END=32449826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr2 32449827 . A . PASS END=32449834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 32460470 . C . PASS END=32460474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 32460475 . A . PASS END=32460630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:28:0,81,1044:0,84,255:40,0 chr2 32460631 . C . PASS END=32460637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,909:0,67,255:26,0 chr2 32461316 . T . PASS END=32461408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,152,255:40,0 chr2 32463201 . C . PASS END=32463365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1203:0,90,255:40,0 chr2 32463366 . C . PASS END=32463371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 32465366 . T . PASS END=32465382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:59:0,120,1800:0,122,255:40,0 chr2 32466073 . T . PASS END=32466111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1322:0,84,255:40,0 chr2 32466112 . A . LowGQ END=32466112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:0:53:0,0,1089:54,0,255:40,0 chr2 32466113 . G . PASS END=32466219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,99,1377:0,99,255:40,0 chr2 32474676 . C . PASS END=32474689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,773:0,61,255:26,0 chr2 32474690 . T . PASS END=32474692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32474693 . T . PASS END=32474693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:25,0 chr2 32474694 . G . PASS END=32474694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 32474695 . T . PASS END=32474700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:27,0 chr2 32474701 . A . PASS END=32474701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 32474702 . T . PASS END=32474702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:27,0 chr2 32474703 . G . PASS END=32474703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 32474704 . A . PASS END=32474704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr2 32474705 . A . PASS END=32474708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1035:0,87,255:30,0 chr2 32474709 . T . PASS END=32474709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 32474710 . C . PASS END=32474711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 32474712 . A . PASS END=32474712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr2 32474713 . G . PASS END=32474714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 32474715 . T . PASS END=32474715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:26,0 chr2 32474716 . T . PASS END=32474724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,939:0,87,255:31,0 chr2 32474725 . T . PASS END=32474725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 32474726 . G . PASS END=32474727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 32474728 . T . PASS END=32474728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 32474729 . A . PASS END=32474764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:31:0,88,1103:0,88,255:35,0 chr2 32474765 . G . PASS END=32474765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr2 32474766 . G . PASS END=32475071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:34:0,89,1271:0,89,255:40,0 chr2 32475072 . T . PASS END=32475108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1197:0,88,255:37,0 chr2 32475109 . G A, 157.44 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,20,0:0,17,0:107:195,110,0,1368,110,1368:255,111,0:0,0:1.5744e+02,1.0744e+02,0.0000e+00,4.5000e+02,1.4221e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,20:0,0,22,15 chr2 32475110 . G . PASS END=32475146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:32:0,84,1260:0,92,255:35,0 chr2 32475147 . A . PASS END=32475180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1223:0,86,255:32,0 chr2 32475181 . T . PASS END=32475181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 32475182 . A . PASS END=32475185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 32475186 . T . PASS END=32475186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:28,0 chr2 32475187 . T . PASS END=32475199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1040:0,80,255:31,0 chr2 32475200 . A . PASS END=32475200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 32475201 . A . PASS END=32475239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1166:0,83,255:33,0 chr2 32475240 . T . PASS END=32475240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:26,0 chr2 32475241 . C . PASS END=32475242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1202:0,83,255:28,0 chr2 32475243 . C . PASS END=32475250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,90,255:26,0 chr2 32475251 . A . PASS END=32475254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 32475255 . G . PASS END=32475256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 32475257 . A . PASS END=32475258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 32475259 . G . PASS END=32475259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1113:0,60,255:29,0 chr2 32475260 . C . PASS END=32475277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1073:0,83,255:32,0 chr2 32475278 . T . PASS END=32475278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,996:0,79,255:31,0 chr2 32475279 . T . PASS END=32475321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1036:0,80,255:32,0 chr2 32475322 . C . PASS END=32475322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 32475323 . A . PASS END=32475333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1001:0,84,255:29,0 chr2 32475334 . A . PASS END=32475334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr2 32475335 . G . PASS END=32475339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 32475340 . C . PASS END=32475362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,820:0,72,255:26,0 chr2 32475363 . C . PASS END=32475363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 32475364 . G . PASS END=32475376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:24,0 chr2 32475377 . A . PASS END=32475377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:21,0 chr2 32475378 . G . PASS END=32475379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 32475380 . A . PASS END=32475380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 32475381 . G . PASS END=32475402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,864:0,64,255:23,0 chr2 32475403 . T . PASS END=32475403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:20,0 chr2 32475404 . G . PASS END=32475411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,900:0,62,255:22,0 chr2 32475412 . C . PASS END=32475412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32475413 . T . PASS END=32475413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 32475414 . T . PASS END=32475452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1157:0,82,255:33,0 chr2 32475453 . T . PASS END=32475453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:29,0 chr2 32475454 . G . PASS END=32476066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:32:0,83,1225:0,83,255:40,0 chr2 32476067 . T . PASS END=32476067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1205:0,77,255:28,0 chr2 32476068 . G . PASS END=32476203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1260:0,84,255:40,0 chr2 32476204 . A . PASS END=32476204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1286:0,73,255:40,0 chr2 32476205 . A . PASS END=32476352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,111,1589:0,112,255:40,0 chr2 32476353 . G . PASS END=32476389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,105,1575:0,116,255:40,0 chr2 32476390 . T G, 167.39 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,18,0:0,22,0:117:205,120,0,1543,120,1543:255,120,0:0,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,20:0,0,18,22 chr2 32476391 . C . PASS END=32476427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1030:0,82,255:34,0 chr2 32476428 . C . PASS END=32476440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr2 32476441 . G . PASS END=32476464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:25:0,62,961:0,62,255:26,0 chr2 32476465 . G . PASS END=32476465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 32476466 . C . PASS END=32476466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 32476467 . C . PASS END=32476467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 32476468 . A . PASS END=32476468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 32476469 . T . PASS END=32476469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 32476470 . T . PASS END=32476470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 32476471 . C . PASS END=32476471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 32476472 . A . PASS END=32476472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:28,0 chr2 32476473 . G . PASS END=32476473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 32476474 . G . PASS END=32476474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 32476475 . G . PASS END=32476500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:32,0 chr2 32476501 . T . PASS END=32476501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:30,0 chr2 32476502 . T . PASS END=32476537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1219:0,95,255:36,0 chr2 32476538 . C . PASS END=32476538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:34,0 chr2 32476539 . T . PASS END=32476572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1256:0,81,255:36,0 chr2 32476573 . A . PASS END=32476573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1300:0,59,255:33,0 chr2 32476574 . A . PASS END=32476642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:36:0,93,1335:0,93,255:40,0 chr2 32476643 . T . PASS END=32476643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1381:0,79,255:33,0 chr2 32476644 . C . PASS END=32476670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1208:0,83,255:33,0 chr2 32476677 . G . PASS END=32476677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 32477488 . T . PASS END=32477502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 32477503 . C . PASS END=32477503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 32477504 . C . PASS END=32477511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,748:0,69,255:23,0 chr2 32477512 . G . PASS END=32477512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 32477513 . A . PASS END=32477513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr2 32477514 . G . PASS END=32477521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 32477522 . C . PASS END=32477524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr2 32477525 . C . PASS END=32477531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:30,0 chr2 32477532 . A . PASS END=32477532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1052:0,57,255:30,0 chr2 32477533 . G . PASS END=32477732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:32:0,86,1106:0,86,255:40,0 chr2 32477733 . T . PASS END=32477748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:25:0,72,1039:0,74,255:26,0 chr2 32481836 . A . PASS END=32481836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 32481844 . T . PASS END=32481844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 32503225 . A . PASS END=32503242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 32503243 . C . PASS END=32503243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 32503244 . C . PASS END=32503244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 32503245 . C . PASS END=32503247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 32503248 . G . PASS END=32503248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 32503249 . G . PASS END=32503259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:25,0 chr2 32503260 . C . PASS END=32503268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,916:0,81,255:27,0 chr2 32503269 . G . PASS END=32503269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 32503270 . G . PASS END=32503272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 32503273 . T . PASS END=32503273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 32503274 . T . PASS END=32503282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1139:0,90,255:30,0 chr2 32503283 . T . PASS END=32503283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 32503284 . C . PASS END=32503302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 32503303 . G . PASS END=32503303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 32515552 . A . PASS END=32515705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:88:42:0,88,1395:0,88,255:40,0 chr2 32517246 . G . PASS END=32517417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:84:29:0,84,1260:0,87,255:40,0 chr2 32523303 . G . PASS END=32523380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,138,255:40,0 chr2 32526451 . G . PASS END=32526564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,112,1430:0,112,255:40,0 chr2 32530558 . C . PASS END=32530695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:45:0,104,1623:0,104,255:40,0 chr2 32532173 . G . PASS END=32532220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,169,255:40,0 chr2 32582230 . A . PASS END=32582231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 32582232 . G . PASS END=32582236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:9,0 chr2 32582237 . C . PASS END=32582247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr2 32582248 . G . PASS END=32582251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 32582252 . C . PASS END=32582253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 32582254 . C . PASS END=32582285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,593:0,40,255:19,0 chr2 32582286 . T . PASS END=32582287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr2 32582288 . T . PASS END=32582296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 32582297 . T . PASS END=32582297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 32582298 . G . PASS END=32582308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:18,0 chr2 32582309 . G . PASS END=32582309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,527:0,21,255:16,0 chr2 32582310 . G . PASS END=32582310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 32582311 . A . LowGQ END=32582311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,527:1,0,255:16,0 chr2 32582312 . A . PASS END=32582312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 32582313 . G . PASS END=32582357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,599:0,40,255:19,0 chr2 32582358 . G . PASS END=32582359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 32582360 . C . PASS END=32582360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 32582361 . G . PASS END=32582361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 32582362 . G . PASS END=32582362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 32582363 . C . PASS END=32582363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 32582364 . G . PASS END=32582365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 32582366 . G . PASS END=32582367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 32582368 . G . PASS END=32582369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 32582370 . G . PASS END=32582370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr2 32582371 . G . PASS END=32582371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 32582372 . G . PASS END=32582372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 32582373 . G . PASS END=32582373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr2 32582374 . G . PASS END=32582374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,482:0,18,255:15,0 chr2 32582375 . C . PASS END=32582376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr2 32582377 . G . PASS END=32582377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 32582378 . C . PASS END=32582383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:18,0 chr2 32582384 . T . PASS END=32582384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,594:0,29,255:16,0 chr2 32582385 . C . PASS END=32582390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:17,0 chr2 32582391 . G . PASS END=32582394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,43,255:13,0 chr2 32582395 . C . PASS END=32582400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:16,0 chr2 32582401 . C . PASS END=32582401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:16,0 chr2 32582402 . T . PASS END=32582411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr2 32582412 . C . PASS END=32582414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 32582415 . C . PASS END=32582415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 32582416 . A . PASS END=32582425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr2 32582426 . A . PASS END=32582426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 32582427 . C . PASS END=32582432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 32582433 . C . PASS END=32582433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 32582434 . G . PASS END=32582435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 32582436 . G . PASS END=32582436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 32582437 . C . PASS END=32582446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 32582447 . T . PASS END=32582455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr2 32582456 . A . PASS END=32582456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 32582457 . C . PASS END=32582457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 32582458 . C . PASS END=32582494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr2 32582495 . G . PASS END=32582506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:21:0,42,630:0,47,255:17,0 chr2 32582507 . T . PASS END=32582507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:13,0 chr2 32582508 . C . PASS END=32582522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 32582523 . G . PASS END=32582550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,410:0,33,255:13,0 chr2 32582551 . A . PASS END=32582551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 32582552 . G . PASS END=32582554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 32584000 . A . PASS END=32584009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,215,255:40,0 chr2 32602656 . C . PASS END=32602671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr2 32602672 . G . PASS END=32602682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1125:0,90,255:34,0 chr2 32602683 . A . PASS END=32602683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1186:0,50,255:32,0 chr2 32602684 . G . PASS END=32602818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:39:0,80,1339:0,80,255:40,0 chr2 32602819 . T . PASS END=32602821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:33,0 chr2 32602822 . A . PASS END=32602827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,108,255:33,0 chr2 32602828 . C . PASS END=32602837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1035:0,99,255:26,0 chr2 32605221 . G . PASS END=32605341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:38:0,102,1322:0,102,255:40,0 chr2 32605342 . A . PASS END=32605342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1504:0,78,255:40,0 chr2 32605343 . C . PASS END=32605358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,105,1709:0,105,255:40,0 chr2 32613818 . T . PASS END=32613818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 32613819 . G . PASS END=32613826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:26,0 chr2 32613827 . G . PASS END=32613996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1215:0,82,255:40,2 chr2 32613997 . C . PASS END=32614006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:26,0 chr2 32614007 . G . PASS END=32614011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:33:25:0,33,495:0,75,255:12,0 chr2 32617107 . A . PASS END=32617218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:88:35:0,88,1520:0,88,255:40,0 chr2 32620579 . C . PASS END=32620661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,111,1680:0,111,255:40,0 chr2 32626231 . G . PASS END=32626234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,690:0,57,255:19,0 chr2 32626235 . G . PASS END=32626250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:25,0 chr2 32626251 . C . PASS END=32626400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:27:0,81,993:0,81,255:40,0 chr2 32626401 . C . PASS END=32626407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1279:0,72,255:36,0 chr2 32626408 . T . PASS END=32626408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 32626409 . A . PASS END=32626412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1212:0,72,255:35,0 chr2 32626413 . G . PASS END=32626413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:32,0 chr2 32626414 . A . PASS END=32626416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:33,0 chr2 32626417 . A . PASS END=32626420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:33,0 chr2 32626421 . A . PASS END=32626421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1382:0,76,255:32,0 chr2 32626422 . T . PASS END=32626453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:36:0,82,1341:0,82,255:36,0 chr2 32626531 . G . PASS END=32626674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1215:0,89,255:40,0 chr2 32626675 . A . PASS END=32626675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,901:0,29,255:27,0 chr2 32626676 . A . PASS END=32626676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 32626677 . A . PASS END=32626678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 32626679 . T . PASS END=32626681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 32626682 . A . PASS END=32626691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,86,255:26,0 chr2 32631567 . T . PASS END=32631625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:72:0,120,1800:0,200,255:40,0 chr2 32639837 . G . PASS END=32640246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:27:0,81,1039:0,81,255:40,0 chr2 32640247 . T . PASS END=32640247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1318:0,56,255:35,0 chr2 32640248 . T . PASS END=32640266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:38:0,98,1366:0,98,255:38,0 chr2 32640267 . G . PASS END=32640267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:34,0 chr2 32640268 . G . PASS END=32640303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1193:0,91,255:35,0 chr2 32640304 . A . PASS END=32640304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:30,0 chr2 32640305 . T . PASS END=32640312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:34:0,93,1236:0,94,255:34,0 chr2 32640313 . A . PASS END=32640313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1174:0,78,255:32,0 chr2 32640314 . T . PASS END=32640407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:37:0,94,1180:0,94,255:40,0 chr2 32640408 . T . PASS END=32640408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:64:50:0,64,1704:0,64,255:40,0 chr2 32640409 . C . PASS END=32640737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:35:0,85,1256:0,85,255:40,1 chr2 32640738 . T . PASS END=32640738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr2 32640739 . G . PASS END=32640744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr2 32640745 . A . PASS END=32640745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:31,0 chr2 32640746 . T . PASS END=32641100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:35:0,91,1388:0,91,255:40,0 chr2 32641101 . A . PASS END=32641101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:60:47:0,60,1359:0,60,255:40,0 chr2 32641102 . C . PASS END=32641182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:32:0,87,1305:0,96,255:40,0 chr2 32641183 . T . PASS END=32641183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 32641184 . C . PASS END=32641188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 32641189 . A . PASS END=32641197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:27:0,68,1030:0,68,255:26,0 chr2 32641198 . T . PASS END=32641228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,498:0,42,255:19,0 chr2 32641229 . A . PASS END=32641229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 32641230 . A . PASS END=32641231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 32654214 . G . PASS END=32654363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,129,255:40,0 chr2 32655933 . G . PASS END=32655933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:20,0 chr2 32655934 . A . PASS END=32655936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr2 32655937 . T . PASS END=32655937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:20,0 chr2 32655938 . G . PASS END=32655939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr2 32655940 . T . PASS END=32655940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 32655941 . T . PASS END=32655941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr2 32655942 . T . PASS END=32655942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr2 32655943 . A . PASS END=32655943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr2 32655944 . T . PASS END=32655944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 32655945 . T . PASS END=32655947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:21,0 chr2 32655948 . T . PASS END=32655948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 32655949 . G . PASS END=32655949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 32655950 . G . PASS END=32655955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,781:0,30,255:25,0 chr2 32655956 . C . PASS END=32655956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr2 32655957 . C . PASS END=32655957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32655958 . A . PASS END=32655960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,958:0,48,255:28,0 chr2 32655961 . C . PASS END=32655962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 32655963 . C . PASS END=32655963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 32655964 . C . PASS END=32655965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 32655966 . T . PASS END=32655969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,0 chr2 32655970 . A . PASS END=32655970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr2 32655971 . A . PASS END=32655971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 32655972 . T . PASS END=32655972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,927:0,56,255:27,0 chr2 32655973 . C . PASS END=32655973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 32655974 . T . PASS END=32655974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 32655975 . T . PASS END=32656122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1215:0,87,255:40,0 chr2 32656123 . T . PASS END=32656130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:30:0,69,1100:0,69,255:26,0 chr2 32656131 . C . PASS END=32656132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 32656133 . C . PASS END=32656145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 32656146 . T . PASS END=32656147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:22,0 chr2 32656148 . C . PASS END=32656148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,70,255:22,0 chr2 32656149 . A . PASS END=32656149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,898:0,15,255:22,0 chr2 32656150 . G . PASS END=32656151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,906:0,23,255:21,0 chr2 32656152 . C . PASS END=32656155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:27:0,32,868:0,32,255:21,0 chr2 32656156 . C . PASS END=32656156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,859:0,9,255:17,0 chr2 32656157 . A . PASS END=32656157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:17,0 chr2 32656158 . G . PASS END=32656158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:11:25:0,11,781:0,11,255:17,0 chr2 32658712 . C . PASS END=32658867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:33:0,96,1241:0,99,255:40,0 chr2 32658868 . C . PASS END=32658872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 32660522 . A . PASS END=32660653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:40:0,104,1390:0,104,255:40,0 chr2 32661121 . G . PASS END=32661252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:33:0,82,1089:0,82,255:40,0 chr2 32664576 . G . PASS END=32664754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:44:0,90,1350:0,122,255:40,0 chr2 32666397 . G . PASS END=32666530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1226:0,89,255:40,0 chr2 32667133 . A . PASS END=32667144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,102,1530:0,108,255:40,0 chr2 32667145 . T . PASS END=32667181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,153,255:40,0 chr2 32667182 . G C, 249.83 PASS DP=68;MQ=249.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,27,0:0,41,0:200:288,203,0,2512,203,2512:255,207,0:0,0:2.4983e+02,1.9983e+02,0.0000e+00,4.5000e+02,2.3460e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,42,26:0,0,35,33 chr2 32667183 . T . PASS END=32667219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:70:0,120,1800:0,175,255:40,0 chr2 32667220 . C . PASS END=32667294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:39:0,99,1480:0,100,255:40,0 chr2 32667392 . C . PASS END=32667523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:95:42:0,95,1415:0,95,255:40,0 chr2 32668559 . T . PASS END=32668656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:68:0,120,1800:0,188,255:40,0 chr2 32670589 . G . PASS END=32670711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:41:0,84,1260:0,93,255:40,0 chr2 32670712 . C . PASS END=32670713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr2 32670714 . A . PASS END=32670720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:29:0,87,1057:0,87,255:29,0 chr2 32670721 . C . PASS END=32670721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 32670722 . T . PASS END=32670726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,987:0,87,255:29,0 chr2 32670727 . T . PASS END=32670727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 32670728 . T . PASS END=32670731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 32670732 . A . PASS END=32670736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:26,0 chr2 32673863 . A . PASS END=32673993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:32:0,80,1161:0,80,255:40,0 chr2 32673994 . C . PASS END=32673996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:26,0 chr2 32678876 . G . PASS END=32679022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,114,1362:0,114,255:40,0 chr2 32688262 . T . PASS END=32688393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:30:0,81,1215:0,83,255:40,0 chr2 32688394 . A . PASS END=32688399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:23,0 chr2 32688400 . T . PASS END=32688432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,735:0,47,255:19,0 chr2 32688433 . T . PASS END=32688433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 32688434 . G . PASS END=32688449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,737:0,57,255:19,0 chr2 32689577 . A . PASS END=32689594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:25,0 chr2 32689595 . A . PASS END=32689595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 32689596 . A . PASS END=32689887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:29:0,80,1094:0,80,255:40,0 chr2 32689888 . A . PASS END=32689888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 32689889 . A . PASS END=32689891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:27,0 chr2 32690133 . A . PASS END=32690160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,120,1800:0,132,255:40,0 chr2 32690161 . C . PASS END=32690210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:49:0,102,1530:0,114,255:40,0 chr2 32690211 . A . PASS END=32690212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:96:49:0,96,1440:0,130,255:32,0 chr2 32690213 . T . PASS END=32690213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:41:45:0,41,1405:0,41,255:30,0 chr2 32690214 . A . PASS END=32690216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:41:0,93,1395:0,93,255:32,0 chr2 32690217 . G . PASS END=32690217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1202:0,67,255:28,0 chr2 32690218 . A . PASS END=32690218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1305:0,100,255:28,0 chr2 32690219 . G . PASS END=32690222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1103:0,72,255:26,0 chr2 32690223 . A . PASS END=32690223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1100:0,55,255:22,0 chr2 32690224 . T . PASS END=32690231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:29:0,63,945:0,63,255:23,0 chr2 32690232 . G . PASS END=32690232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,804:0,53,255:19,0 chr2 32692593 . G . PASS END=32692602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:30,0 chr2 32692603 . A . PASS END=32692603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,967:0,62,255:29,0 chr2 32692604 . T . PASS END=32692610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 32692611 . C . PASS END=32692611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 32692612 . C . PASS END=32692619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 32692620 . T . PASS END=32692620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:29,0 chr2 32692621 . T . PASS END=32692807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:31:0,84,1127:0,86,255:40,0 chr2 32692971 . A . PASS END=32692974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr2 32692975 . C . PASS END=32692979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 32692980 . A . PASS END=32692980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 32692981 . T . PASS END=32693175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:31:0,90,1157:0,93,255:40,0 chr2 32693176 . G . PASS END=32693179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:40:0,69,1035:0,120,255:23,0 chr2 32693505 . G . PASS END=32693640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:37:0,81,1275:0,81,255:40,0 chr2 32693641 . G . PASS END=32693641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:35,0 chr2 32693642 . C . PASS END=32693833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1305:0,87,255:40,0 chr2 32693834 . T . PASS END=32693834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:28,0 chr2 32693835 . G . PASS END=32693840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,95,255:31,0 chr2 32693841 . T . PASS END=32693845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:36:0,78,1170:0,91,255:26,0 chr2 32693846 . C . PASS END=32693850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:28,0 chr2 32693851 . G . PASS END=32693851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 32694463 . G . PASS END=32694682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:35:0,81,1215:0,92,255:40,0 chr2 32695236 . G . PASS END=32695243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:35:0,94,1236:0,94,255:38,0 chr2 32695244 . T . PASS END=32695244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1372:0,73,255:37,0 chr2 32695245 . G . PASS END=32695365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:37:0,81,1215:0,104,255:40,0 chr2 32695366 . G . PASS END=32695369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:25,0 chr2 32696082 . G . PASS END=32696219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:52:0,120,1800:0,156,255:40,0 chr2 32698180 . G . PASS END=32698307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:39:0,93,1458:0,93,255:40,0 chr2 32701281 . C . PASS END=32701412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:66:0,120,1800:0,148,255:40,0 chr2 32702436 . C . PASS END=32702651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:32:0,87,1164:0,87,255:40,0 chr2 32703703 . G . PASS END=32703886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:37:0,85,1191:0,85,255:40,0 chr2 32704530 . G . PASS END=32704674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:36:0,84,1260:0,90,255:40,0 chr2 32704675 . T . PASS END=32704682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:34:0,75,1125:0,102,255:26,0 chr2 32704683 . C . PASS END=32704685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 32706388 . G . PASS END=32706521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:42:0,120,1800:0,124,255:40,0 chr2 32707497 . C . PASS END=32707498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 32707499 . A . PASS END=32707642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,986:0,81,255:40,0 chr2 32707643 . C . PASS END=32707646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:34:0,72,1080:0,102,255:26,0 chr2 32707647 . C . PASS END=32707650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:57:33:0,57,855:0,99,255:19,0 chr2 32710710 . C . PASS END=32710821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:37:0,81,1215:0,98,255:40,0 chr2 32710822 . T . PASS END=32710822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:26,0 chr2 32710823 . A . PASS END=32710826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,95,255:27,0 chr2 32712714 . T . PASS END=32712837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:39:0,104,1443:0,104,255:40,0 chr2 32712838 . T . PASS END=32712868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:49:0,84,1260:0,134,255:40,0 chr2 32713655 . T . PASS END=32713668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,124,255:40,0 chr2 32713669 . C . PASS END=32713705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,135,255:40,0 chr2 32713706 . A T, 264.86 PASS DP=73;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,73,0:1.000,0.000:73:0,36,0:0,37,0:215:303,218,0,2698,218,2705:255,219,0:0,0:2.6486e+02,2.1486e+02,0.0000e+00,4.5000e+02,2.4963e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,44,29:0,0,39,34 chr2 32713707 . C . PASS END=32713743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,203,255:40,0 chr2 32713744 . T . PASS END=32713781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,120,1800:0,127,255:40,0 chr2 32715108 . C . PASS END=32715218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,106,1393:0,106,255:40,0 chr2 32716492 . C . PASS END=32716625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:31:0,90,1350:0,93,255:40,0 chr2 32718607 . G . PASS END=32718734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:49:0,108,1588:0,108,255:40,0 chr2 32724614 . G . PASS END=32724615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1164:0,99,255:33,0 chr2 32724616 . G . PASS END=32724616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr2 32724617 . T . PASS END=32724626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:33:0,98,1130:0,98,255:39,0 chr2 32724627 . A . PASS END=32724627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1356:0,78,255:38,0 chr2 32724628 . C . PASS END=32725166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:31:0,83,1224:0,83,255:40,0 chr2 32725167 . A . PASS END=32725167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 32725168 . T . PASS END=32725169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 32725170 . A . PASS END=32725170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr2 32725171 . T . PASS END=32725171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 32725172 . A . PASS END=32725176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 32726780 . G . PASS END=32726951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:30:0,81,1215:0,83,255:40,0 chr2 32726952 . A . PASS END=32726955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1108:0,74,255:26,0 chr2 32727862 . G . PASS END=32727958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:58:0,120,1800:0,161,255:40,0 chr2 32728109 . G . PASS END=32728286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:35:0,87,1305:0,99,255:40,0 chr2 32728287 . T . PASS END=32728288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,75,255:25,0 chr2 32728289 . A . PASS END=32728289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:57:35:0,57,855:0,105,255:19,0 chr2 32728290 . C . PASS END=32728302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,900:0,65,255:23,0 chr2 32728303 . G . PASS END=32728303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:19,0 chr2 32730072 . G . PASS END=32730083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:18,0 chr2 32730084 . C . PASS END=32730092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:26,0 chr2 32730093 . C . PASS END=32730110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:31,0 chr2 32730111 . A . PASS END=32730111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 32730112 . A . PASS END=32730112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:30,0 chr2 32730113 . G . PASS END=32730119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1164:0,60,255:33,0 chr2 32730120 . T . PASS END=32730120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1318:0,102,255:34,0 chr2 32730121 . G . PASS END=32730121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr2 32730122 . C . PASS END=32730122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 32730123 . A . PASS END=32730123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 32730124 . G . PASS END=32730124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 32730125 . G . PASS END=32730129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1202:0,63,255:32,0 chr2 32730130 . A . PASS END=32730130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1302:0,89,255:32,0 chr2 32730131 . C . PASS END=32730132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr2 32730133 . T . PASS END=32730133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 32730134 . C . PASS END=32730134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:29,0 chr2 32730135 . C . PASS END=32730138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:30,0 chr2 32730139 . C . PASS END=32730139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 32730140 . A . PASS END=32730140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:28,0 chr2 32730141 . G . PASS END=32730141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 32730142 . A . PASS END=32730142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:28,0 chr2 32730143 . A . PASS END=32730143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 32730144 . G . PASS END=32730149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr2 32730150 . G . PASS END=32730151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:27,0 chr2 32730152 . T . PASS END=32730153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 32730154 . T . PASS END=32730154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr2 32730155 . G . PASS END=32730170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 32730171 . T . PASS END=32730171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 32730172 . C . PASS END=32730180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:28,0 chr2 32730181 . A . PASS END=32730181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 32730182 . G . PASS END=32730183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32730184 . G . PASS END=32730224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,831:0,69,255:26,0 chr2 32730225 . T . PASS END=32730231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:42:24:0,42,630:0,55,255:15,0 chr2 32730232 . T . PASS END=32730234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 32730235 . G . PASS END=32730247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 32730248 . C . PASS END=32730272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 32733047 . C . PASS END=32733050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr2 32733051 . C . PASS END=32733065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr2 32733066 . T . PASS END=32733066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 32733067 . G . PASS END=32733073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr2 32733074 . T . PASS END=32733238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1039:0,84,255:40,0 chr2 32733239 . T . PASS END=32733239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:38,0 chr2 32733240 . A . PASS END=32733267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1377:0,90,255:40,0 chr2 32733268 . T . PASS END=32733268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1132:0,61,255:27,0 chr2 32733269 . C . PASS END=32733277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:93:38:0,93,1395:0,101,255:33,0 chr2 32733278 . C . PASS END=32733278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:30,0 chr2 32733279 . A . PASS END=32733281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr2 32733282 . T . PASS END=32733282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:28,0 chr2 32733283 . A . PASS END=32733287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:30,0 chr2 32733288 . T . PASS END=32733288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr2 32733289 . C . PASS END=32733293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1141:0,80,255:29,0 chr2 32733294 . C . PASS END=32733296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 32733297 . T . PASS END=32733297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:24,0 chr2 32733298 . C . PASS END=32733300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 32733301 . T . PASS END=32733301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,945:0,40,255:24,0 chr2 32733302 . C . PASS END=32733302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 32733303 . T . PASS END=32733303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,906:0,37,255:23,0 chr2 32733304 . G . PASS END=32733308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:51:27:0,51,810:0,51,255:19,0 chr2 32733309 . T . PASS END=32733309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,859:0,9,255:16,0 chr2 32733310 . C . PASS END=32733311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:51:27:0,51,765:0,64,255:17,0 chr2 32733312 . G . PASS END=32733315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:25:0,31,540:0,31,255:16,0 chr2 32733316 . T . LowGQ END=32733317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,534:0,0,255:11,0 chr2 32733318 . C . PASS END=32733323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:20:0,30,450:0,32,255:12,0 chr2 32733324 . A . PASS END=32733324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:24:16:0,24,360:0,31,255:7,0 chr2 32733325 . A . LowGQ END=32733326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,390:0,0,255:7,0 chr2 32734805 . T . PASS END=32734818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,861:0,65,255:26,0 chr2 32734819 . G . PASS END=32734822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1019:0,81,255:30,0 chr2 32734823 . A . PASS END=32734824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr2 32734825 . T . PASS END=32735008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,1147:0,90,255:40,0 chr2 32735009 . G . PASS END=32735009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1158:0,78,255:28,0 chr2 32735010 . C . PASS END=32735018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:32,0 chr2 32735019 . A . PASS END=32735019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:29,0 chr2 32735020 . T . PASS END=32735031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1101:0,80,255:30,0 chr2 32735032 . A . PASS END=32735032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 32735033 . T . PASS END=32735035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 32735036 . T . PASS END=32735050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,75,255:25,0 chr2 32735051 . T . PASS END=32735051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr2 32735052 . G . PASS END=32735061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 32735593 . A . PASS END=32735593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:40:36:0,40,778:0,40,255:32,0 chr2 32735594 . T . PASS END=32735596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1275:0,111,255:37,0 chr2 32735597 . G . PASS END=32735597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1002:0,66,255:35,0 chr2 32735598 . A . PASS END=32735701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:39:0,93,1292:0,93,255:40,0 chr2 32738000 . A . PASS END=32738000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,961:0,57,255:31,0 chr2 32738001 . A . PASS END=32738003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr2 32738004 . C . PASS END=32738004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:32,0 chr2 32738005 . A . PASS END=32738033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1201:0,84,255:39,0 chr2 32738034 . G . PASS END=32738034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:37,0 chr2 32738035 . C . PASS END=32738182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:39:0,82,1382:0,82,255:40,0 chr2 32738183 . A . PASS END=32738183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1363:0,70,255:34,0 chr2 32738184 . T . PASS END=32738211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1139:0,80,255:35,0 chr2 32738212 . A . PASS END=32738212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr2 32738213 . G . PASS END=32738221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 32740057 . G . PASS END=32740057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 32740058 . T . PASS END=32740058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 32740059 . T . PASS END=32740061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:29,0 chr2 32740062 . T . PASS END=32740062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr2 32740063 . T . PASS END=32740744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:29:0,85,1027:0,85,255:40,0 chr2 32740745 . A . PASS END=32740745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1416:0,74,255:34,0 chr2 32740746 . C . PASS END=32740773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,99,1473:0,104,255:39,0 chr2 32740774 . A . PASS END=32740774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:31,0 chr2 32740775 . A . PASS END=32740796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,88,255:34,0 chr2 32740797 . G . PASS END=32740832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,65,255:26,0 chr2 32740833 . C . PASS END=32740837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:57:27:0,57,855:0,64,255:19,0 chr2 32743321 . G . PASS END=32743464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:94:42:0,94,1604:0,94,255:40,0 chr2 32743884 . C . PASS END=32743884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr2 32743885 . T . PASS END=32744005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,1031:0,81,255:40,0 chr2 32744006 . A . PASS END=32744006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1090:0,60,255:27,0 chr2 32744007 . G . PASS END=32744013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:29,0 chr2 32746860 . T . PASS END=32746994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:36:0,93,1360:0,93,255:40,1 chr2 32749955 . A . PASS END=32750086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:74:0,120,1800:0,201,255:40,0 chr2 32750531 . G . PASS END=32750537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr2 32750538 . G . PASS END=32750556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,701:0,63,255:23,0 chr2 32750557 . G . PASS END=32750558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 32750559 . G . PASS END=32750559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 32750560 . T . PASS END=32750563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:29,0 chr2 32750564 . C . PASS END=32750564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 32750565 . T . PASS END=32750695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:31:0,83,1148:0,83,255:40,0 chr2 32754718 . G . PASS END=32754720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 32754721 . A . PASS END=32754721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:24,0 chr2 32754722 . G . PASS END=32754722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 32754723 . C . PASS END=32754891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:29:0,86,1041:0,86,255:40,0 chr2 32756422 . A . PASS END=32756438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:34,0 chr2 32756439 . G . PASS END=32756439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr2 32756440 . C . PASS END=32756598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:34:0,82,1260:0,82,255:40,2 chr2 32756599 . A . PASS END=32756599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:28,0 chr2 32756600 . T . PASS END=32756607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1155:0,80,255:30,0 chr2 32756608 . T . PASS END=32756608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 32756609 . A . PASS END=32756611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 32756612 . T . PASS END=32756613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 32756614 . A . PASS END=32756615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 32756616 . C . PASS END=32756618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1070:0,74,255:25,0 chr2 32768308 . G . PASS END=32768314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:26,0 chr2 32768315 . C . PASS END=32768592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:30:0,88,1096:0,88,255:40,0 chr2 32768593 . G . PASS END=32768593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:29,0 chr2 32768594 . A . PASS END=32768603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:32,0 chr2 32768604 . A . PASS END=32768608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,86,255:26,0 chr2 32770710 . G . PASS END=32770904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,975:0,86,255:40,0 chr2 32770905 . A . PASS END=32770922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:27:0,66,990:0,68,255:26,0 chr2 32770923 . C . PASS END=32770927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 32772917 . C . PASS END=32772920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 32772921 . A . PASS END=32772921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:10,0 chr2 32772922 . G . PASS END=32772926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:14,0 chr2 32772927 . C . PASS END=32772928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 32772929 . A . PASS END=32772929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 32772930 . G . PASS END=32772930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 32772931 . C . PASS END=32772933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,597:0,51,255:18,0 chr2 32772934 . T . PASS END=32772939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:24,0 chr2 32772940 . C . PASS END=32772940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 32772941 . C . PASS END=32772947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr2 32772948 . C . PASS END=32772948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 32772949 . A . PASS END=32772949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr2 32772950 . A . PASS END=32772950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:23,0 chr2 32772951 . C . PASS END=32772954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:25,0 chr2 32772955 . A . PASS END=32772955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 32772956 . G . PASS END=32772956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 32772957 . A . PASS END=32772968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:39,0 chr2 32772969 . A . PASS END=32772969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1295:0,62,255:37,0 chr2 32772970 . T . PASS END=32772986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1352:0,100,255:40,0 chr2 32772987 . G . PASS END=32772987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:40,0 chr2 32772988 . C . PASS END=32773022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:43:0,91,1551:0,91,255:40,0 chr2 32773023 . T . PASS END=32773023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1651:0,72,255:40,0 chr2 32773024 . G . PASS END=32773073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1360:0,100,255:40,0 chr2 32773074 . T . PASS END=32773074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:29,0 chr2 32773075 . T . PASS END=32773080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:30,0 chr2 32773081 . G . PASS END=32773081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 32774380 . G . PASS END=32774393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:17,0 chr2 32774394 . C . PASS END=32774397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 32774398 . A . PASS END=32774400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 32774401 . C . PASS END=32774432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,892:0,61,255:26,0 chr2 32774433 . G . PASS END=32774434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32774435 . C . PASS END=32774436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 32774437 . T . PASS END=32774441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 32774442 . T . PASS END=32774443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 32774444 . A . PASS END=32774467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr2 32774468 . C . PASS END=32774468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:27,0 chr2 32774469 . C . PASS END=32774472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 32774473 . C . PASS END=32774473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 32774474 . C . PASS END=32774482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 32774483 . T . PASS END=32774483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 32774484 . T . PASS END=32774491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 32774492 . T . PASS END=32774492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 32774493 . T . PASS END=32774495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,942:0,84,255:28,0 chr2 32774496 . C . PASS END=32774496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 32774497 . A . PASS END=32774499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32774500 . C . PASS END=32774529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,931:0,64,255:26,0 chr2 32774530 . T . PASS END=32774530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 32774531 . A . PASS END=32774540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 32774541 . T . PASS END=32774544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr2 32774545 . T . PASS END=32774545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 32774546 . C . PASS END=32774548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 32800223 . T . PASS END=32800433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:84:38:0,84,1305:0,84,255:40,0 chr2 32818982 . A . PASS END=32819127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:31:0,85,1184:0,85,255:40,0 chr2 32820101 . A . PASS END=32820211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:44:0,96,1578:0,96,255:40,0 chr2 32822818 . A . PASS END=32822820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,972:0,51,255:28,0 chr2 32822821 . C . PASS END=32822822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 32822823 . T . PASS END=32822823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,950:0,60,255:28,0 chr2 32822824 . T . PASS END=32822824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1060:0,93,255:31,0 chr2 32822825 . T . PASS END=32822825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 32822826 . G . PASS END=32822847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1186:0,83,255:37,0 chr2 32822848 . A . PASS END=32822848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1243:0,67,255:35,0 chr2 32822849 . T . PASS END=32822919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:38:0,87,1269:0,87,255:40,0 chr2 32822920 . C . PASS END=32822956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,117,1778:0,117,255:40,0 chr2 32822957 . G A, 199.11 PASS DP=51;MQ=249.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,18,0:0,33,0:149:237,152,0,1870,152,1870:255,153,0:0,0:1.9911e+02,1.4911e+02,0.0000e+00,4.5000e+02,1.8388e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,33:0,0,23,28 chr2 32822958 . C . PASS END=32822994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,114,1710:0,122,255:40,0 chr2 32822995 . T . PASS END=32823005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1260:0,117,255:35,0 chr2 32823006 . T . PASS END=32823033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr2 32823034 . A . PASS END=32823034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:21,0 chr2 32823035 . G . PASS END=32823035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 32824806 . G . PASS END=32824967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:94:37:0,94,1282:0,94,255:40,0 chr2 32826753 . A . PASS END=32826827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:87:0,120,1800:0,249,255:40,0 chr2 32828073 . G . PASS END=32828150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,138,255:40,0 chr2 32832522 . G . PASS END=32832522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:24,0 chr2 32832523 . T . PASS END=32832523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr2 32832524 . G . PASS END=32832527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr2 32832528 . G . PASS END=32832667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1215:0,84,255:40,0 chr2 32832668 . A . PASS END=32832701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,64,255:26,0 chr2 32832702 . T . PASS END=32832702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr2 32832703 . T . PASS END=32832707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 32832708 . G . PASS END=32832710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 32836515 . G . PASS END=32836649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1163:0,80,255:40,0 chr2 32842792 . C . PASS END=32842795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,893:0,72,255:25,0 chr2 32842796 . A . PASS END=32842800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:29,0 chr2 32842801 . G . PASS END=32842816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1140:0,93,255:31,0 chr2 32842817 . A . PASS END=32842817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,973:0,76,255:30,0 chr2 32842818 . G . PASS END=32842910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1089:0,82,255:37,0 chr2 32842911 . A . PASS END=32842911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:29,0 chr2 32842912 . A . PASS END=32842919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr2 32842920 . T . PASS END=32842920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:27,0 chr2 32842921 . C . PASS END=32842929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 32842930 . C . PASS END=32842930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 32842931 . C . PASS END=32842931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:23,0 chr2 32842932 . C . PASS END=32842959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:24,0 chr2 32842960 . T . PASS END=32842971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr2 32853360 . A . PASS END=32853388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1141:0,82,255:34,0 chr2 32853389 . G . PASS END=32853389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr2 32853390 . G . PASS END=32853447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,103,1390:0,103,255:40,0 chr2 32855590 . A . PASS END=32855614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:54:0,120,1800:0,162,255:40,0 chr2 32855615 . A G, 248.65 PASS DP=67;MQ=248.83;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,39,0:0,28,0:199:286,202,0,2581,202,2581:255,205,0:0,0:2.4865e+02,1.9865e+02,0.0000e+00,4.5000e+02,2.3342e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,47,20:0,0,39,28 chr2 32855616 . C . PASS END=32855652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:67:0,120,1800:0,171,255:40,0 chr2 32855653 . T . PASS END=32855767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:37:0,99,1485:0,111,255:40,0 chr2 32858943 . A . PASS END=32858947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1035:0,84,255:29,0 chr2 32858948 . A . PASS END=32858948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 32858949 . G . PASS END=32858951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr2 32858952 . G . PASS END=32858952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 32858953 . A . PASS END=32858955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1127:0,90,255:31,0 chr2 32858956 . T . PASS END=32858956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr2 32858957 . T . PASS END=32859014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:33:0,93,1395:0,99,255:40,0 chr2 32859015 . T . PASS END=32859015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1430:0,79,255:40,0 chr2 32859016 . G . PASS END=32859072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:40:0,93,1395:0,96,255:40,0 chr2 32865337 . G . PASS END=32865355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 32865356 . T . PASS END=32865356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 32865357 . T . PASS END=32865416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:29:0,80,1107:0,80,255:36,0 chr2 32865417 . A . PASS END=32865417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:26,0 chr2 32865418 . C . PASS END=32865424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:28,0 chr2 32865425 . T . PASS END=32865426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,968:0,70,255:27,0 chr2 32865427 . T . PASS END=32865432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 32865433 . C . PASS END=32865449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,67,255:25,0 chr2 32865450 . T . PASS END=32865465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,698:0,53,255:19,0 chr2 32865466 . A . PASS END=32865466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 32865467 . C . PASS END=32865477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,660:0,43,255:18,0 chr2 32875198 . A . PASS END=32875300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:46:0,99,1607:0,99,255:40,0 chr2 32889370 . T . PASS END=32889534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,122,255:40,0 chr2 32891702 . G . PASS END=32891777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,122,255:40,0 chr2 32891778 . T . PASS END=32891778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:60:59:0,60,1555:0,60,255:40,0 chr2 32891779 . G . PASS END=32891779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,8:58:41:58:0,41,1479:0,41,255:40,0 chr2 32891780 . T . PASS END=32891835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:30:0,84,1260:0,90,255:40,0 chr2 32897339 . A . PASS END=32897451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:97:38:0,97,1300:0,97,255:40,0 chr2 32901187 . A . PASS END=32901187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 32903923 . C . PASS END=32903989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,159,255:40,0 chr2 32927874 . T . PASS END=32927978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:34:0,93,1144:0,98,255:40,0 chr2 32927979 . C . PASS END=32927979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:32,0 chr2 32927980 . A . PASS END=32927987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1305:0,99,255:33,0 chr2 32929928 . G . PASS END=32929984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,143,255:40,0 chr2 32958895 . G . PASS END=32958986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,133,255:40,0 chr2 32958987 . T . PASS END=32958990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:54:0,120,1800:0,146,255:40,0 chr2 32961761 . C . PASS END=32961763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 32961764 . C . PASS END=32961767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 32961768 . T . PASS END=32961768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,795:0,25,255:23,0 chr2 32961769 . T . PASS END=32961775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:70:27:0,70,889:0,70,255:28,0 chr2 32961776 . T . PASS END=32961779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 32961780 . T . PASS END=32961780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr2 32961781 . C . PASS END=32961782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:30,0 chr2 32961783 . T . PASS END=32961783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 32961784 . T . PASS END=32961786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:31,0 chr2 32961787 . G . PASS END=32961787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 32961788 . T . PASS END=32961872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1097:0,86,255:40,0 chr2 32961873 . A . PASS END=32961883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,93,255:26,0 chr2 32983359 . G . PASS END=32983361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:25,0 chr2 32983362 . G . PASS END=32983365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,974:0,84,255:28,0 chr2 32983366 . A . PASS END=32983366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,907:0,67,255:27,0 chr2 32983367 . A . PASS END=32983368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 32983369 . T . PASS END=32983369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr2 32983370 . C . PASS END=32983371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1005:0,90,255:30,0 chr2 32983372 . T . PASS END=32983372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 32983373 . T . PASS END=32983373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 32983374 . A . PASS END=32983374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 32983375 . G . PASS END=32983488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:33:0,81,1132:0,81,255:40,0 chr2 32983489 . G . PASS END=32983525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,142,255:40,0 chr2 32983526 . C T, 49.16 PASS DP=53;MQ=250.00;MQRankSum=6.209;ReadPosRankSum=5.227;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,24,0:0.453,0.000:53:12,14,0:17,10,0:48:84,0,50,820,1037,1858:255,0,255:28,0:4.9160e+01,7.4552e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,18,9,15:14,15,9,15 chr2 32983527 . A . PASS END=32983563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,99,1372:0,101,255:40,0 chr2 32983564 . C . PASS END=32983564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 32983565 . G . PASS END=32983582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:31:0,84,1260:0,89,255:34,0 chr2 32983583 . G . PASS END=32983586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:22,0 chr2 32991535 . G . PASS END=32991563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 32991564 . G . PASS END=32991564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:16,0 chr2 32991565 . A . PASS END=32991565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 32991566 . T . PASS END=32991566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 32991567 . A . PASS END=32991567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 32991568 . G . PASS END=32991568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr2 32991569 . G . PASS END=32991573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 32991574 . T . PASS END=32991574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:16,0 chr2 32991575 . A . PASS END=32991576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 33002949 . C . PASS END=33003047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:31:0,83,1140:0,83,255:40,0 chr2 33005121 . G . PASS END=33005162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,120,1800:0,123,255:40,0 chr2 33007693 . A . PASS END=33007745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:72:0,120,1800:0,199,255:40,0 chr2 33012051 . A . PASS END=33012051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 33012052 . G . PASS END=33012054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 33012055 . A . PASS END=33012055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 33012056 . A . PASS END=33012216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,903:0,81,255:40,0 chr2 33036091 . G . PASS END=33036261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:81:29:0,81,1092:0,86,255:40,0 chr2 33036262 . A . PASS END=33036286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,906:0,62,255:26,0 chr2 33036287 . A . PASS END=33036288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 33037571 . G . PASS END=33037678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:38:0,90,1350:0,98,255:40,0 chr2 33037679 . C . PASS END=33037682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:54:35:0,54,810:0,105,255:19,0 chr2 33042524 . T . PASS END=33042624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:53:0,120,1800:0,132,255:40,0 chr2 33045883 . C . PASS END=33045977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,92,255:40,0 chr2 33045978 . A . PASS END=33045978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 33045979 . A . PASS END=33045979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 33045980 . G . PASS END=33045980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr2 33045981 . C . PASS END=33045988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:28,0 chr2 33045989 . T . PASS END=33045992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 33045993 . A . PASS END=33045993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,943:0,51,255:23,0 chr2 33045994 . A . PASS END=33045996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:23,0 chr2 33045997 . C . PASS END=33046005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,65,255:19,0 chr2 33172392 . A . PASS END=33172393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 33172394 . G . PASS END=33172426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:6,0 chr2 33172427 . C . PASS END=33172470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:9,0 chr2 33172471 . G . PASS END=33172490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 33172491 . C . PASS END=33172493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 33172494 . G . PASS END=33172504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:10,0 chr2 33172505 . G . PASS END=33172505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 33172506 . G . PASS END=33172517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 33172518 . T . PASS END=33172528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 33172529 . C . PASS END=33172536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 33172537 . C . PASS END=33172541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 33172542 . T . PASS END=33172542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 33172543 . C . PASS END=33172543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 33172544 . G . PASS END=33172544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 33172545 . C . PASS END=33172549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr2 33172550 . A . PASS END=33172557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 33172558 . T . LowGQ END=33172558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:7,0 chr2 33172559 . C . PASS END=33172559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 33172560 . G . LowGQ END=33172560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:7,0 chr2 33172561 . C . PASS END=33172561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 33172562 . G . PASS END=33172562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr2 33172563 . C . PASS END=33172564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 33172565 . C . PASS END=33172573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 33172574 . G . PASS END=33172583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 33172584 . A . PASS END=33172596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 33172597 . C . LowGQ END=33172599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:5,0 chr2 33172600 . G . PASS END=33172668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 33172669 . C . PASS END=33172670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,172:2,0 chr2 33172671 . G . PASS END=33172675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 33172676 . G . PASS END=33172678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 33172679 . G . PASS END=33172680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:7:0,11,270:0,11,255:6,0 chr2 33172681 . G . PASS END=33172736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 33172737 . G . PASS END=33172740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 33172741 . A . PASS END=33172747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 33172748 . C . PASS END=33172784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:12,0 chr2 33172785 . A . PASS END=33172785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 33172786 . C . PASS END=33172786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 33172787 . C . PASS END=33172787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 33172788 . A . PASS END=33172801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 33172802 . A . LowGQ END=33172802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,327:3,0,255:10,0 chr2 33172803 . G . PASS END=33172824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr2 33172825 . A . PASS END=33172825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr2 33172826 . G . PASS END=33172842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,380:0,33,255:11,0 chr2 33172843 . G . PASS END=33172852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 33172853 . G . PASS END=33172853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 33172854 . C . PASS END=33172856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 33172857 . C . PASS END=33172857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 33172858 . A . PASS END=33172877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 33172878 . C . PASS END=33172878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 33172879 . T . PASS END=33172881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 33172882 . A . PASS END=33172885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:6,0 chr2 33173942 . G . PASS END=33173946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 33173947 . A . PASS END=33173947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,848:0,51,255:26,0 chr2 33173948 . T . PASS END=33173949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr2 33173950 . T . PASS END=33173950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 33173951 . C . PASS END=33173959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1141:0,90,255:30,0 chr2 33173960 . G . PASS END=33173960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 33173961 . C . PASS END=33173999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1177:0,80,255:36,0 chr2 33174000 . A . PASS END=33174000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:27,0 chr2 33174001 . G . PASS END=33174001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 33174002 . G . PASS END=33174003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1100:0,74,255:27,0 chr2 33174004 . G . PASS END=33174004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 33174005 . C . PASS END=33174005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 33174006 . A . PASS END=33174006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 33174007 . C . PASS END=33174012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 33245976 . C . PASS END=33245998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,421:0,33,255:13,0 chr2 33245999 . A . PASS END=33246003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 33246004 . A . PASS END=33246004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 33246005 . G . PASS END=33246017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,593:0,48,255:19,0 chr2 33246018 . G . PASS END=33246025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:22,0 chr2 33246026 . C . PASS END=33246026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 33246027 . T . PASS END=33246029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 33246030 . G . PASS END=33246030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 33246031 . T . PASS END=33246031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 33246032 . G . PASS END=33246071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,676:0,54,255:19,0 chr2 33246072 . T . PASS END=33246073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 33246074 . G . PASS END=33246086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 33246087 . C . PASS END=33246113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:24,0 chr2 33246114 . G . PASS END=33246125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:30,0 chr2 33246126 . C . PASS END=33246126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 33246127 . T . PASS END=33246143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1125:0,83,255:32,0 chr2 33246144 . C . PASS END=33246144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:31,0 chr2 33246145 . T . PASS END=33246249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1133:0,80,255:40,0 chr2 33246250 . A . PASS END=33246250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 33246251 . C . PASS END=33246254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1049:0,84,255:29,0 chr2 33246255 . C . PASS END=33246261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 33246262 . G . PASS END=33246263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 33246264 . T . PASS END=33246273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 33335649 . A . PASS END=33335809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,1119:0,87,255:40,0 chr2 33335810 . C . PASS END=33335818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1350:0,117,255:36,0 chr2 33359805 . A . PASS END=33359807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 33359808 . G . PASS END=33359808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 33359809 . A . PASS END=33359809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 33359810 . T . PASS END=33359810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr2 33359811 . A . PASS END=33359812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr2 33359813 . T . PASS END=33359813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr2 33359814 . A . PASS END=33359958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1009:0,83,255:39,0 chr2 33359959 . A . PASS END=33359959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 33359960 . C . PASS END=33359960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 33359961 . A . PASS END=33359966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:30:0,77,1139:0,77,255:26,0 chr2 33359967 . A . PASS END=33359968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 33359969 . T . PASS END=33359969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:26,0 chr2 33359970 . C . PASS END=33359970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 33359971 . T . PASS END=33359971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 33359972 . C . PASS END=33359986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 33359987 . T . PASS END=33359988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:26,0 chr2 33359989 . A . PASS END=33359990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 33359991 . G . PASS END=33360027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr2 33411923 . T . PASS END=33411938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,784:0,66,255:26,0 chr2 33411939 . A . PASS END=33411945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:29,0 chr2 33411946 . A . PASS END=33411946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:27,0 chr2 33411947 . A . PASS END=33411955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:31,0 chr2 33411956 . A . PASS END=33411956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 33411957 . G . PASS END=33411965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1117:0,82,255:32,0 chr2 33411966 . A . PASS END=33411966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 33411967 . A . PASS END=33411984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1087:0,82,255:33,0 chr2 33411985 . C . PASS END=33411985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:31,0 chr2 33411986 . C . PASS END=33412087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1158:0,86,255:38,0 chr2 33412088 . A . PASS END=33412088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr2 33412089 . T . PASS END=33412098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1255:0,89,255:32,0 chr2 33412099 . T . PASS END=33412126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:25,0 chr2 33412127 . C . PASS END=33412147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,651:0,41,255:19,0 chr2 33413644 . T . PASS END=33413646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,476:0,45,255:15,0 chr2 33413647 . A . PASS END=33413663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,596:0,48,255:17,0 chr2 33413664 . G . PASS END=33413699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:26,0 chr2 33413700 . G . PASS END=33413703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 33413704 . A . PASS END=33413706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,929:0,65,255:26,0 chr2 33413707 . T . PASS END=33413851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1017:0,80,255:34,0 chr2 33413852 . T . PASS END=33413863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:23,0 chr2 33413864 . C . PASS END=33413864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:21,0 chr2 33413865 . G . PASS END=33413870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 33413871 . G . PASS END=33413871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 33413872 . C . PASS END=33413878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 33413879 . A . PASS END=33413881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 33413882 . G . PASS END=33413883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 33413884 . T . PASS END=33413902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:19,0 chr2 33413903 . A . PASS END=33413918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,450:0,36,255:13,0 chr2 33442619 . T . PASS END=33442721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:35:0,84,1350:0,84,255:40,0 chr2 33447147 . C . PASS END=33447218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:68:0,120,1800:0,171,255:40,0 chr2 33468729 . A . PASS END=33468851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:38:0,101,1344:0,101,255:40,0 chr2 33477744 . C . PASS END=33477744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 33477745 . T . PASS END=33477745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 33477746 . G . PASS END=33477746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 33477747 . A . PASS END=33477758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,629:0,54,255:18,0 chr2 33477759 . T . PASS END=33477759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:15,0 chr2 33477760 . C . PASS END=33477779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:18,0 chr2 33477780 . G . PASS END=33477786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,711:0,63,255:23,0 chr2 33477787 . A . PASS END=33477787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 33477788 . C . PASS END=33477793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 33477794 . A . PASS END=33477794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 33477795 . G . PASS END=33477805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,878:0,72,255:26,0 chr2 33477806 . C . PASS END=33477806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 33477807 . A . PASS END=33477807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 33477808 . G . PASS END=33477810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 33477811 . T . PASS END=33477811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 33477812 . A . PASS END=33477815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 33477816 . A . PASS END=33477816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 33477817 . C . PASS END=33477849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1103:0,80,255:33,0 chr2 33477850 . C . PASS END=33477888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:26,0 chr2 33477889 . G . PASS END=33477889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 33477890 . A . PASS END=33477893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 33477894 . G . PASS END=33477894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 33477895 . T . PASS END=33477895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 33477896 . C . PASS END=33477898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr2 33477899 . C . PASS END=33477902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 33477903 . C . PASS END=33477911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr2 33482351 . C . PASS END=33482489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1102:0,87,255:40,0 chr2 33482490 . T . PASS END=33482492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 33482493 . T . PASS END=33482497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 33482498 . C . PASS END=33482498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 33482499 . A . PASS END=33482503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,970:0,81,255:27,0 chr2 33482504 . T . PASS END=33482504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 33482505 . C . PASS END=33482505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 33482506 . C . PASS END=33482518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:24,0 chr2 33482519 . A . PASS END=33482524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:47:25:0,47,810:0,47,255:18,0 chr2 33482525 . T . PASS END=33482525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 33482526 . G . PASS END=33482526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 33482527 . G . PASS END=33482533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 33482534 . T . PASS END=33482534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 33482535 . G . PASS END=33482545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr2 33482546 . G . PASS END=33482546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 33482547 . G . PASS END=33482548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 33482549 . A . PASS END=33482550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 33482551 . C . PASS END=33482552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 33482553 . C . PASS END=33482564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr2 33482565 . G . PASS END=33482565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,596:0,15,255:14,0 chr2 33482566 . G . PASS END=33482566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 33482567 . C . PASS END=33482569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 33482570 . A . PASS END=33482570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 33482571 . G . PASS END=33482571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 33482572 . C . PASS END=33482573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 33482574 . A . PASS END=33482574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr2 33482575 . G . PASS END=33482575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 33482576 . A . PASS END=33482576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:13,0 chr2 33482577 . A . PASS END=33482578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 33484655 . T . PASS END=33484677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,146,255:40,0 chr2 33487789 . G . PASS END=33487891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1286:0,86,255:40,0 chr2 33488361 . T . PASS END=33488459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,111,1665:0,112,255:40,0 chr2 33498723 . A . PASS END=33498725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 33498726 . T . PASS END=33498728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:28,1 chr2 33498729 . A . PASS END=33498729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 33498730 . T . PASS END=33498848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1117:0,90,255:40,0 chr2 33500032 . A . PASS END=33500040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr2 33500041 . A . PASS END=33500154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1260:0,89,255:40,0 chr2 33500155 . T . PASS END=33500157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 33500868 . A . PASS END=33500990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1260:0,93,255:40,0 chr2 33505106 . A . PASS END=33505124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,731:0,63,255:25,0 chr2 33505125 . T . PASS END=33505125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 33505126 . C . PASS END=33505126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 33505127 . C . PASS END=33505130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 33505131 . C . PASS END=33505131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr2 33505132 . A . PASS END=33505225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1086:0,87,255:40,0 chr2 33518227 . A . PASS END=33518346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:40:0,87,1305:0,107,255:40,0 chr2 33518347 . G . PASS END=33518349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,117,255:25,0 chr2 33525518 . A . PASS END=33525598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1141:0,83,255:37,0 chr2 33525599 . G . PASS END=33525608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:26,0 chr2 33525609 . C . PASS END=33525637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,43,255:19,0 chr2 33525638 . A . PASS END=33525640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr2 33526589 . A . PASS END=33526711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,102,1575:0,102,255:40,0 chr2 33534501 . A . PASS END=33534501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,632:0,63,255:21,0 chr2 33534502 . T . PASS END=33534502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 33534503 . A . PASS END=33534504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 33534505 . C . PASS END=33534505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 33534506 . A . PASS END=33534509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 33534510 . A . PASS END=33534510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 33534511 . A . PASS END=33534514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,779:0,69,255:23,0 chr2 33534515 . T . PASS END=33534515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 33534516 . T . PASS END=33534516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 33534517 . G . PASS END=33534518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 33534519 . A . PASS END=33534520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 33534521 . G . PASS END=33534521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 33534522 . A . PASS END=33534526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 33534527 . A . PASS END=33534527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:22,0 chr2 33534528 . G . PASS END=33534534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr2 33534535 . C . PASS END=33534535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 33534536 . C . PASS END=33534536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 33534537 . A . PASS END=33534551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:35,0 chr2 33534552 . T . PASS END=33534552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:33,0 chr2 33534553 . T . PASS END=33534577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:35:0,86,1271:0,86,255:38,0 chr2 33534578 . A . PASS END=33534578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 33534579 . C . PASS END=33534614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1038:0,80,255:33,0 chr2 33534615 . C . PASS END=33534623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr2 33540211 . A . PASS END=33540212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr2 33540213 . A . PASS END=33540217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1125:0,87,255:30,0 chr2 33540218 . T . PASS END=33540218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 33540219 . G . PASS END=33540220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 33540221 . A . PASS END=33540221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 33540222 . T . PASS END=33540225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1078:0,90,255:30,0 chr2 33540226 . A . PASS END=33540226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr2 33540227 . A . PASS END=33540227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr2 33540228 . C . PASS END=33540247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:32:0,85,1150:0,85,255:39,0 chr2 33540248 . G A, 169.46 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,19,0:0,22,0:119:207,122,0,1498,122,1498:255,123,0:0,0:1.6946e+02,1.1946e+02,0.0000e+00,4.5000e+02,1.5423e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,26:0,0,21,20 chr2 33540249 . C . PASS END=33540285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,120,1800:0,122,255:40,0 chr2 33540286 . G . PASS END=33540335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,102,255:40,0 chr2 33540336 . G . PASS END=33540336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 33559214 . A . PASS END=33559222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,186,255:40,0 chr2 33567905 . A . PASS END=33567915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 33567916 . T . PASS END=33567930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr2 33567931 . G . PASS END=33567963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1027:0,84,255:30,0 chr2 33567964 . G . PASS END=33567964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 33567965 . C . PASS END=33567966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 33567967 . G . PASS END=33567967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 33567968 . G . PASS END=33567969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 33567970 . T . PASS END=33568012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,839:0,69,255:25,0 chr2 33568013 . A . PASS END=33568019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr2 33568020 . A . PASS END=33568023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:21:0,30,450:0,46,255:10,0 chr2 33568024 . T . PASS END=33568030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:16:0,27,405:0,31,255:9,0 chr2 33572434 . A . PASS END=33572577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:34:0,99,1316:0,102,255:40,0 chr2 33585664 . A . PASS END=33585758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,120,1800:0,153,255:40,0 chr2 33585759 . A . PASS END=33585795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,203,255:40,0 chr2 33585796 . T C, 250.73 PASS DP=68;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,33,0:0,35,0:201:289,204,0,2570,204,2570:255,204,0:0,0:2.5073e+02,2.0073e+02,0.0000e+00,4.5000e+02,2.3550e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,43:0,0,44,24 chr2 33585797 . G . PASS END=33585833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,112,1776:0,112,255:40,0 chr2 33585834 . G . PASS END=33585846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,114,1710:0,123,255:40,0 chr2 33586496 . C . PASS END=33586510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:38:0,84,1333:0,84,255:40,0 chr2 33586511 . T . PASS END=33586582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:51:0,120,1800:0,123,255:40,0 chr2 33588457 . A . PASS END=33588585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:40:0,108,1596:0,113,255:40,0 chr2 33589283 . A . PASS END=33589423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:41:0,107,1482:0,107,255:40,0 chr2 33590400 . A . PASS END=33590523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:38:0,87,1305:0,99,255:40,0 chr2 33590524 . A . PASS END=33590537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:25,0 chr2 33590538 . T . PASS END=33590554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:19,0 chr2 33590555 . C . PASS END=33590555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 33590556 . C . PASS END=33590570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,592:0,41,255:17,0 chr2 33614251 . A . PASS END=33614361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1174:0,84,255:40,1 chr2 33614362 . T . PASS END=33614373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:27:0,66,990:0,71,255:25,0 chr2 33622200 . G . PASS END=33622219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:19,0 chr2 33622220 . G . PASS END=33622221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,782:0,63,255:21,0 chr2 33622222 . G . PASS END=33622315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,1025:0,80,255:40,0 chr2 33622316 . T . PASS END=33622334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:25:0,71,917:0,71,255:26,0 chr2 33622335 . A . PASS END=33622336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 33622337 . A . PASS END=33622342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 33622343 . T . PASS END=33622349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr2 33623431 . A . PASS END=33623515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:34:0,86,1145:0,86,255:40,0 chr2 33623516 . T . PASS END=33623516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:76:47:0,76,1238:0,76,255:40,0 chr2 33623517 . T . PASS END=33623566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:35:0,84,1260:0,92,255:40,0 chr2 33623567 . G . PASS END=33623567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:28,0 chr2 33623568 . T . PASS END=33623573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:29,0 chr2 33623574 . A . PASS END=33623574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr2 33623575 . C . PASS END=33623580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 33623581 . T . PASS END=33623581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr2 33623582 . G . PASS END=33623594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 33623595 . G . PASS END=33623612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 33682737 . G T, 160.43 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,27,0:0,11,0:110:198,113,0,298,298,298:255,114,0:0,0:1.6043e+02,1.1043e+02,0.0000e+00,2.9520e+02,3.2997e+02,2.9821e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,21:0,0,18,20 chr2 33740204 . A . PASS END=33740273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,120,1800:0,158,255:40,0 chr2 33741609 . A . PASS END=33741711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:66:0,120,1800:0,197,255:40,0 chr2 33745019 . G . PASS END=33745081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:104:0,120,1800:0,255,255:40,0 chr2 33745620 . G . PASS END=33745751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:86:46:0,86,1516:0,86,255:40,0 chr2 33747022 . T . PASS END=33747169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:38:0,93,1395:0,101,255:40,0 chr2 33748946 . T . PASS END=33748950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1000:0,93,255:32,0 chr2 33748951 . T . PASS END=33749119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,3:65:83:32:0,83,1218:0,83,255:40,0 chr2 33749499 . A . PASS END=33749615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:38:0,96,1398:0,96,255:40,0 chr2 33752204 . A . PASS END=33752209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr2 33752210 . A . PASS END=33752210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 33752211 . A . PASS END=33752479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:31:0,90,1288:0,92,255:40,0 chr2 33759390 . C . PASS END=33759467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,129,255:40,0 chr2 33764161 . C . PASS END=33764184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:89:31:0,89,1157:0,89,255:40,0 chr2 33764185 . A . PASS END=33764268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,88,255:40,0 chr2 33764269 . T . PASS END=33764289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1047:0,74,255:26,0 chr2 33768579 . T . PASS END=33768694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:44:0,120,1800:0,132,255:40,0 chr2 33774671 . G . PASS END=33774818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:39:0,101,1394:0,101,255:40,2 chr2 33780598 . C . PASS END=33780634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,164,255:40,0 chr2 33783278 . A . PASS END=33783278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 33783279 . C . PASS END=33783284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 33783285 . A . PASS END=33783285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 33783286 . G . PASS END=33783324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,440:0,41,255:19,0 chr2 33783325 . G . PASS END=33783333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr2 33783334 . A . PASS END=33783334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:21,0 chr2 33783335 . G . PASS END=33783360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,786:0,66,255:22,0 chr2 33783361 . A . PASS END=33783395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,615:0,47,255:18,0 chr2 33783396 . G . PASS END=33783396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 33783397 . C . PASS END=33783403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 33783739 . C . PASS END=33783739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 33783740 . G . PASS END=33783744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:31,0 chr2 33783745 . A . PASS END=33783745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 33783746 . T . PASS END=33783790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:34,0 chr2 33783791 . A . PASS END=33783791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr2 33783792 . G . PASS END=33783810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:34,0 chr2 33783811 . T . PASS END=33783811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 33783812 . G . PASS END=33783812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 33783813 . G . PASS END=33783867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr2 33783868 . A . PASS END=33783868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 33783869 . G . PASS END=33783877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,900:0,65,255:26,0 chr2 33783878 . G . PASS END=33783878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 33783879 . A . PASS END=33783902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:26,0 chr2 33783903 . G . PASS END=33783903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 33783904 . G . PASS END=33783904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 33783905 . C . PASS END=33783959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:36,0 chr2 33783960 . A . PASS END=33783960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1269:0,65,255:34,0 chr2 33783961 . A . PASS END=33784097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1200:0,81,255:40,0 chr2 33787796 . G . PASS END=33787804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,136,255:40,0 chr2 33809843 . T . PASS END=33810147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:36:0,90,1328:0,90,255:40,0 chr2 33810148 . A . PASS END=33810148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:31,0 chr2 33810149 . G . PASS END=33810511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1141:0,80,255:40,1 chr2 33810546 . T . PASS END=33810730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:83:36:0,83,1305:0,83,255:40,0 chr2 33810731 . G . PASS END=33810732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 33810733 . T . PASS END=33810739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,94,255:31,0 chr2 33810740 . C . PASS END=33810740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:30,0 chr2 33810741 . C . PASS END=33810755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1218:0,91,255:34,0 chr2 33810756 . T . PASS END=33810756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1105:0,72,255:28,0 chr2 33810757 . G . PASS END=33810764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1180:0,85,255:30,0 chr2 33811629 . C . PASS END=33811745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:54:0,120,1800:0,144,255:40,0 chr2 33812307 . C . PASS END=33812387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,162,255:40,0 chr2 33813402 . T . PASS END=33813404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1027:0,62,255:30,0 chr2 33813405 . T . PASS END=33813428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1022:0,83,255:35,0 chr2 33813429 . G . PASS END=33813429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:34,0 chr2 33813430 . A . PASS END=33813431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 33813432 . C . PASS END=33813432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1213:0,78,255:33,0 chr2 33813433 . A . PASS END=33813511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,105,1575:0,111,255:40,0 chr2 33813512 . C . PASS END=33813512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:78:53:0,78,1566:0,78,255:40,0 chr2 33813513 . T . PASS END=33813586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:38:0,84,1260:0,114,255:40,0 chr2 33817147 . T . PASS END=33817274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:36:0,90,1350:0,104,255:40,0 chr2 33817275 . C . PASS END=33817275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:30,0 chr2 33817276 . T . PASS END=33817281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr2 33820554 . A . PASS END=33820572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:19,0 chr2 33820573 . T . PASS END=33820579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,705:0,60,255:20,0 chr2 33820580 . C . PASS END=33820581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 33820582 . A . PASS END=33820612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:26,0 chr2 33820613 . G . PASS END=33820625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 33820626 . T . PASS END=33820626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,926:0,73,255:28,0 chr2 33820627 . T . PASS END=33820631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 33820632 . A . PASS END=33820633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 33820634 . A . PASS END=33820636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 33820637 . C . PASS END=33820638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 33820639 . G . PASS END=33820649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 33820650 . T . PASS END=33820669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,895:0,67,255:26,0 chr2 33820670 . A . PASS END=33820670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,754:0,42,255:20,0 chr2 33820671 . G . PASS END=33820675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 33820676 . C . PASS END=33820676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr2 33820677 . T . PASS END=33820686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 33820687 . A . PASS END=33820697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:18,0 chr2 33820698 . C . PASS END=33820698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 33820699 . T . PASS END=33820704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 33824236 . C . PASS END=33824241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1227:0,102,255:34,0 chr2 33824242 . T . PASS END=33824242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:31,0 chr2 33824243 . C . PASS END=33824275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1096:0,83,255:33,0 chr2 33824276 . G . PASS END=33824287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,74,255:26,0 chr2 33824288 . T . PASS END=33824288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 36583436 . A . PASS END=36583437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 36583438 . G . PASS END=36583438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 36583439 . T . PASS END=36583452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 36583453 . G . PASS END=36583460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:44:16:0,44,560:0,44,255:19,0 chr2 36583461 . G . PASS END=36583498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:23,0 chr2 36583499 . G . PASS END=36583499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 36583500 . G . PASS END=36583501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 36583502 . C . PASS END=36583502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,814:0,28,255:20,0 chr2 36583503 . T . PASS END=36583503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr2 36583504 . G . PASS END=36583507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 36583508 . C . PASS END=36583508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 36583509 . T . PASS END=36583516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 36583517 . G . PASS END=36583517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr2 36583518 . C . PASS END=36583518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36583519 . G . PASS END=36583550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,684:0,47,255:19,0 chr2 36583551 . C . PASS END=36583551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 36583552 . C . PASS END=36583552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 36583553 . T . PASS END=36583557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36583558 . C . PASS END=36583558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 36583559 . G . PASS END=36583569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 36583570 . C . PASS END=36583570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 36583571 . G . PASS END=36583574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36583575 . A . PASS END=36583583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 36583584 . A . PASS END=36583585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 36583586 . T . PASS END=36583586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 36583587 . G . PASS END=36583591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr2 36583592 . G . PASS END=36583592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 36583593 . G . PASS END=36583598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 36583599 . T . PASS END=36583622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:18,0 chr2 36583623 . G . PASS END=36583629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 36583630 . G . PASS END=36583630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 36583631 . T . PASS END=36583635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 36583636 . C . PASS END=36583636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 36583637 . A . PASS END=36583639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36583640 . C . PASS END=36583640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 36583641 . A . PASS END=36583647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 36583648 . C . PASS END=36583649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 36583650 . A . PASS END=36583662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 36583663 . C . PASS END=36583698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 36583699 . G . PASS END=36583706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:12,0 chr2 36583707 . T . PASS END=36583707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:8,0 chr2 36583708 . C . PASS END=36583717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:10,0 chr2 36583718 . C . PASS END=36583736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 36583737 . T . PASS END=36583765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,150:6,0 chr2 36583766 . G . PASS END=36583766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 36586047 . T . PASS END=36586047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr2 36586048 . G . PASS END=36586056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr2 36586057 . T . PASS END=36586057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 36586058 . A . PASS END=36586068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,960:0,84,255:29,0 chr2 36586069 . T . PASS END=36586070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:28,0 chr2 36586071 . A . PASS END=36586075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:30,0 chr2 36586076 . A . PASS END=36586076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 36586077 . A . PASS END=36586077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:30,0 chr2 36586078 . G . PASS END=36586165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:85:34:0,85,1202:0,85,255:40,0 chr2 36586166 . G . PASS END=36586166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1182:0,56,255:27,0 chr2 36586167 . A . PASS END=36586169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,88,255:25,0 chr2 36605500 . C . PASS END=36605513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1302:0,81,255:38,0 chr2 36623757 . A . PASS END=36623930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:94:37:0,94,1304:0,94,255:40,0 chr2 36668401 . A . PASS END=36668405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr2 36668406 . A . PASS END=36668407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,626:0,60,255:20,0 chr2 36668408 . G . PASS END=36668410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 36668411 . A . PASS END=36668431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,800:0,63,255:23,0 chr2 36668432 . T . PASS END=36668432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 36668433 . G . PASS END=36668435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 36668436 . G . PASS END=36668441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 36668442 . T . PASS END=36668443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr2 36668444 . C . PASS END=36668446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:28,0 chr2 36668447 . T . PASS END=36668447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 36668448 . C . PASS END=36668461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr2 36668462 . A . PASS END=36668463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr2 36668464 . A . PASS END=36668467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 36668468 . T . PASS END=36668468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 36668469 . G . PASS END=36668492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr2 36668493 . C . PASS END=36668567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,892:0,62,255:26,0 chr2 36668568 . G . PASS END=36668568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr2 36668569 . G . PASS END=36668601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,660:0,54,255:19,0 chr2 36668602 . G . PASS END=36668619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 36668620 . G . PASS END=36668624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 36668625 . C . PASS END=36668626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 36668627 . C . PASS END=36668630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 36668631 . G . PASS END=36668631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 36668632 . A . PASS END=36668639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 36668640 . C . PASS END=36668643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:11:0,24,360:0,33,255:8,0 chr2 36669758 . T . PASS END=36669762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 36669763 . G . PASS END=36669765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36669766 . G . PASS END=36669766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 36669767 . T . PASS END=36669767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 36669768 . G . PASS END=36669777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr2 36669778 . A . PASS END=36669785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:30,0 chr2 36669786 . A . PASS END=36669787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 36669788 . G . PASS END=36669854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1103:0,81,255:37,0 chr2 36669855 . T . PASS END=36669855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:32,0 chr2 36669856 . G . PASS END=36669872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1210:0,86,255:31,0 chr2 36669873 . A . PASS END=36669873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 36669874 . A . PASS END=36669874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 36669875 . C . PASS END=36669878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:24,0 chr2 36691677 . A . PASS END=36691798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,99,1388:0,101,255:40,0 chr2 36704032 . A . PASS END=36704032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 36704033 . T . PASS END=36704039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:31,0 chr2 36704040 . C . PASS END=36704040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr2 36704041 . C . PASS END=36704067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:80:31:0,80,1246:0,80,255:40,0 chr2 36704068 . A . PASS END=36704068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1370:0,73,255:39,0 chr2 36704069 . T . PASS END=36704106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,120,1800:0,129,255:40,0 chr2 36704107 . T . PASS END=36704143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,136,255:40,0 chr2 36704144 . C T, 229.20 PASS DP=61;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,30,0:0,31,0:179:267,182,0,2237,182,2237:255,183,0:0,0:2.2920e+02,1.7920e+02,0.0000e+00,4.5000e+02,2.1397e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,30:0,0,32,29 chr2 36704145 . G . PASS END=36704181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,133,255:40,0 chr2 36704182 . T . PASS END=36704213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:44:0,87,1305:0,132,255:40,0 chr2 36704214 . G . PASS END=36704214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1373:0,73,255:27,0 chr2 36706640 . A . PASS END=36706670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:26,0 chr2 36706671 . C . PASS END=36706802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,959:0,81,255:40,0 chr2 36706803 . G . PASS END=36706803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr2 36706804 . A . PASS END=36706815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:32,0 chr2 36706816 . G . PASS END=36706837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:21:0,60,900:0,63,255:25,0 chr2 36726362 . A . PASS END=36726490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:97:37:0,97,1254:0,97,255:40,0 chr2 36737126 . C . PASS END=36737130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 36737131 . G . PASS END=36737131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 36737132 . A . PASS END=36737132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 36737133 . A . PASS END=36737142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:22,0 chr2 36737143 . G . PASS END=36737143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr2 36737144 . A . PASS END=36737144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr2 36737145 . A . PASS END=36737145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 36737146 . C . PASS END=36737147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 36737148 . T . PASS END=36737148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 36737149 . A . PASS END=36737153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,789:0,75,255:26,0 chr2 36737154 . A . PASS END=36737164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,972:0,80,255:32,0 chr2 36737165 . T . PASS END=36737165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr2 36737166 . G . PASS END=36737167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1219:0,99,255:34,0 chr2 36737168 . A . PASS END=36737168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,945:0,68,255:32,0 chr2 36737169 . C . PASS END=36737203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:34:0,98,1183:0,98,255:39,0 chr2 36737204 . G . PASS END=36737204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:35,0 chr2 36737205 . T . PASS END=36737239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:32:0,89,1294:0,89,255:38,0 chr2 36737240 . G . PASS END=36737240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:29,0 chr2 36737241 . C . PASS END=36737242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 36737243 . G . PASS END=36737276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,817:0,61,255:26,0 chr2 36737277 . A . PASS END=36737282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:24:0,48,720:0,58,255:18,0 chr2 36739416 . G . PASS END=36739423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,659:0,41,255:19,0 chr2 36739424 . A . PASS END=36739425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 36739426 . C . PASS END=36739427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 36739428 . C . PASS END=36739445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:25,0 chr2 36739446 . C . PASS END=36739505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,902:0,81,255:30,0 chr2 36739506 . C . PASS END=36739515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr2 36739516 . T . PASS END=36739533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:24,0 chr2 36739534 . A . PASS END=36739537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,810:0,53,255:18,0 chr2 36740699 . A . PASS END=36740699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 36740700 . G . PASS END=36740729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,703:0,63,255:25,0 chr2 36740730 . G . PASS END=36740876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1119:0,86,255:37,0 chr2 36740877 . T . PASS END=36740878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 36740879 . A . PASS END=36740884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:29,0 chr2 36740885 . G . PASS END=36740897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1025:0,73,255:26,0 chr2 36740898 . A . PASS END=36740898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr2 36740899 . T . PASS END=36740908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:24,0 chr2 36744470 . A . PASS END=36744479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,545:0,45,255:17,0 chr2 36744480 . G . PASS END=36744480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 36744481 . G . PASS END=36744487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:19,0 chr2 36744488 . A . PASS END=36744505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,747:0,63,255:26,0 chr2 36744506 . C . PASS END=36744508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 36744509 . C . PASS END=36744509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 36744510 . C . PASS END=36744520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,951:0,87,255:29,0 chr2 36744521 . C . PASS END=36744521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1049:0,62,255:28,0 chr2 36744522 . C . PASS END=36744603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1133:0,80,255:35,0 chr2 36744604 . C . PASS END=36744604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:30,0 chr2 36744605 . T . PASS END=36744675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1180:0,83,255:36,0 chr2 36744676 . C . PASS END=36744685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,80,255:24,0 chr2 36749235 . A . PASS END=36749235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:33,0 chr2 36749236 . T . PASS END=36749240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:37,0 chr2 36749241 . C . PASS END=36749243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1339:0,76,255:38,1 chr2 36749244 . T . PASS END=36749439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:35:0,81,1215:0,92,255:40,0 chr2 36749440 . T . PASS END=36749450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:28:0,60,900:0,83,255:26,0 chr2 36749451 . G . PASS END=36749451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:19,0 chr2 36749452 . C . PASS END=36749452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr2 36749453 . A . PASS END=36749456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:25:0,42,630:0,75,255:19,0 chr2 36756296 . G . PASS END=36756309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,887:0,62,255:26,0 chr2 36764495 . A . PASS END=36764523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:12,0 chr2 36764524 . C . PASS END=36764524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 36764525 . A . PASS END=36764533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 36764534 . G . PASS END=36764547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 36764548 . G . PASS END=36764548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 36764549 . A . PASS END=36764580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:16,0 chr2 36764581 . C . PASS END=36764582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 36764583 . C . PASS END=36764594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr2 36764595 . G . PASS END=36764597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 36764598 . G . PASS END=36764650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,629:0,41,255:18,0 chr2 36764651 . C . PASS END=36764651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 36764652 . C . PASS END=36764672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 36764673 . C . PASS END=36764689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 36771519 . A . PASS END=36771620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:35:0,85,1271:0,85,255:40,0 chr2 36771621 . A . PASS END=36771621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1386:0,76,255:34,0 chr2 36771622 . T . PASS END=36771641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,89,255:34,0 chr2 36774127 . A . PASS END=36774131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 36774132 . G . PASS END=36774307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:30:0,81,1182:0,90,255:40,0 chr2 36774308 . A . PASS END=36774314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:35:0,60,900:0,75,255:22,0 chr2 36775668 . C . PASS END=36775844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:43:0,93,1395:0,111,255:40,0 chr2 36779274 . T . PASS END=36779311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,99,1485:0,107,255:40,0 chr2 36780306 . C . PASS END=36780322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,99,1653:0,99,255:40,0 chr2 36781398 . T . PASS END=36781400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr2 36781401 . T C, 36.53 PASS DP=35;MQ=250.00;MQRankSum=4.517;ReadPosRankSum=2.098;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,10,0:0.294,0.000:34:10,5,0:14,5,0:36:71,0,50,329,841,1170:255,0,255:21,0:3.6533e+01,9.8689e-04,5.3001e+01,3.2893e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,7,4,6:9,15,5,5 chr2 36781402 . A . PASS END=36781405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1218:0,86,255:32,0 chr2 36782826 . C . PASS END=36782848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,158,255:40,0 chr2 36782849 . A . PASS END=36782885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,155,255:40,0 chr2 36782886 . G A, 49.86 PASS DP=54;MQ=250.00;MQRankSum=6.293;ReadPosRankSum=4.596;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,26,0:0.481,0.000:54:16,15,0:12,11,0:48:85,0,50,893,977,1870:255,0,255:24,0:4.9860e+01,6.6527e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,13,14,12:15,13,17,9 chr2 36782887 . A . PASS END=36782891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,145,255:40,0 chr2 36783120 . C . PASS END=36783126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:38,0 chr2 36783127 . T C, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.534;ReadPosRankSum=0.730;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,21,0:0.500,0.000:42:15,11,0:6,10,0:48:85,0,50,742,743,1485:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,8,9,12:13,8,13,8 chr2 36783128 . T . PASS END=36783163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:40:0,97,1514:0,97,255:40,2 chr2 36783164 . A . PASS END=36783164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1574:0,69,255:40,2 chr2 36783165 . A . PASS END=36783166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:45:0,97,1659:0,97,255:40,0 chr2 36783167 . A . PASS END=36783175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,118,1524:0,118,255:40,0 chr2 36783176 . A . PASS END=36783203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,116,1628:0,116,255:40,0 chr2 36785581 . T . PASS END=36785622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:69:0,120,1800:0,179,255:40,0 chr2 36785623 . T . PASS END=36785656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:71:0,120,1800:0,145,255:40,0 chr2 36787928 . C . PASS END=36788008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,108,1681:0,108,255:40,0 chr2 36805740 . T . PASS END=36805953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:82:35:0,82,1349:0,82,255:40,0 chr2 36805954 . G . PASS END=36805954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:33,0 chr2 36805955 . T . PASS END=36805960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr2 36805961 . T . PASS END=36805961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 36805962 . T . PASS END=36805978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1224:0,83,255:33,0 chr2 36805979 . T . PASS END=36805983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,990:0,99,255:26,0 chr2 36805984 . T . PASS END=36805996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,945:0,66,255:23,0 chr2 36805997 . G . PASS END=36805998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 36805999 . C . PASS END=36805999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 36806000 . T . PASS END=36806008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:22:0,45,675:0,50,255:19,0 chr2 36808433 . T . PASS END=36808574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,120,1800:0,121,255:40,0 chr2 36808731 . T . PASS END=36808731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 36808732 . T G, 235.70 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,24,0:0,39,0:186:273,189,0,2384,189,2384:255,189,0:0,0:2.3570e+02,1.8570e+02,0.0000e+00,4.5000e+02,2.2047e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,34:0,0,30,33 chr2 36808733 . A . PASS END=36808733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 36810496 . C . PASS END=36810510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,171,255:40,0 chr2 36810511 . G . PASS END=36810548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,168,255:40,0 chr2 36810549 . G . PASS END=36810585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,161,255:40,0 chr2 36810586 . T C, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.312;ReadPosRankSum=4.513;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,33,0:0.589,0.000:56:10,23,0:13,10,0:47:85,0,47,1180,806,1987:255,0,255:21,0:5.0000e+01,8.4648e-05,5.0215e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,20,13:15,8,18,15 chr2 36810587 . G . PASS END=36810612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,149,255:40,0 chr2 36818046 . C . PASS END=36818154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:39:0,108,1620:0,117,255:40,0 chr2 36825020 . T . PASS END=36825027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr2 36825028 . C . PASS END=36825031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 36825032 . A . PASS END=36825037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr2 36825038 . C . PASS END=36825038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 36825039 . T . PASS END=36825066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,621:0,45,255:18,0 chr2 36825067 . C . PASS END=36825088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr2 36825089 . T . PASS END=36825089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 36825090 . C . PASS END=36825099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr2 36825100 . G . PASS END=36825104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 36825105 . A . PASS END=36825105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr2 36825106 . C . PASS END=36825135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:21,0 chr2 36825136 . C . PASS END=36825136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 36825137 . G A,T, 113.21 PASS DP=22;MQ=247.55;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0,0:1.000,0.000,0.000:22:0,11,0,0:0,11,0,0:63:151,66,0,831,66,151,845,66,831,845:255,66,0:0,0:1.1321e+02,6.3211e+01,2.0709e-06,4.5000e+02,9.7971e+01,1.5097e+02,4.5000e+02,9.7981e+01,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,7,15:0,0,14,8 chr2 36825138 . G . PASS END=36825146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 36825147 . A . PASS END=36825166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr2 36825167 . G . PASS END=36825167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr2 36825168 . C . PASS END=36825168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 36825169 . C . PASS END=36825169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 36825170 . T C, 101.17 PASS DP=18;MQ=247.01;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,11,0:0,7,0:51:139,54,0,689,54,689:255,54,0:0,0:1.0117e+02,5.1173e+01,3.3134e-05,4.5000e+02,8.5943e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,13:0,0,6,12 chr2 36825171 . C . PASS END=36825176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 36825177 . C . PASS END=36825177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 36825178 . C . PASS END=36825178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 36825179 . G . PASS END=36825179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:13,0 chr2 36825180 . C . PASS END=36825183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:14,0 chr2 36825184 . C . PASS END=36825207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 36825208 . A . PASS END=36825210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 36825211 . G . PASS END=36825211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:9,0 chr2 36825212 . T . PASS END=36825215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 36825216 . C . PASS END=36825216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr2 36825217 . C . PASS END=36825217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 36825218 . T . PASS END=36825256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr2 36825257 . A . LowGQ END=36825257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 36825258 . A . PASS END=36825285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 36943514 . A . PASS END=36943565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,171,255:40,0 chr2 36956569 . T . PASS END=36956634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,175,255:40,0 chr2 36970243 . C . PASS END=36970389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:37:0,81,1215:0,98,255:40,0 chr2 36970390 . C . PASS END=36970399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:28:0,63,945:0,84,255:23,0 chr2 36982064 . T . PASS END=36982197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:61:0,120,1800:0,144,255:40,0 chr2 36986112 . A . PASS END=36986121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,615:0,54,255:19,0 chr2 36986122 . C . PASS END=36986122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36986123 . A . PASS END=36986124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 36986125 . A . PASS END=36986125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 36986126 . A . PASS END=36986126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,699:0,27,255:19,0 chr2 36986127 . A . PASS END=36986131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr2 36986132 . G . PASS END=36986133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 36986134 . A . PASS END=36986275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1155:0,83,255:40,0 chr2 36986276 . T . PASS END=36986276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:31,0 chr2 36986277 . T . PASS END=36986286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,99,255:32,0 chr2 36986287 . A . PASS END=36986299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:25,0 chr2 36986300 . C . PASS END=36986304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 36986305 . A . PASS END=36986311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 36986312 . T . PASS END=36986312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr2 36986313 . A . PASS END=36986314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 36994237 . G . PASS END=36994281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,523:0,45,255:19,0 chr2 36994282 . C . PASS END=36994283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 36994284 . G . PASS END=36994284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:19,0 chr2 36994285 . C . PASS END=36994305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 36994306 . A . PASS END=36994306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 36994307 . G . PASS END=36994329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:23,0 chr2 36994330 . T . PASS END=36994330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr2 36994331 . G . PASS END=36994331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 36994332 . G . PASS END=36994336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 36994337 . C . PASS END=36994343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 36994344 . A . PASS END=36994344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:20,0 chr2 36994345 . C . PASS END=36994347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36994348 . T . PASS END=36994348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 36994349 . G . PASS END=36994351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 36994352 . A . PASS END=36994396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,601:0,41,255:19,0 chr2 36994397 . A . PASS END=36994400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 36994401 . T . PASS END=36994401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:12,0 chr2 36994402 . C . PASS END=36994405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 36994406 . G . PASS END=36994406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 36994407 . G . PASS END=36994428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 37000934 . A . PASS END=37000982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:38:0,86,1313:0,86,255:40,0 chr2 37000983 . T . PASS END=37000983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1496:0,79,255:34,0 chr2 37000984 . G . PASS END=37000990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1440:0,108,255:34,0 chr2 37002145 . G . PASS END=37002210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:36:0,82,1395:0,82,255:40,0 chr2 37008870 . G . PASS END=37008914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,184,255:40,0 chr2 37010483 . G . PASS END=37010536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,155,255:40,0 chr2 37010537 . G . PASS END=37010545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,135,255:40,0 chr2 37014272 . A . PASS END=37014276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr2 37014277 . A . PASS END=37014277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:20,0 chr2 37014278 . A . PASS END=37014278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 37014279 . A . PASS END=37014280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,677:0,49,255:22,0 chr2 37014281 . T . PASS END=37014286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:24,0 chr2 37014287 . T . PASS END=37014287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 37014288 . G . PASS END=37014300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:26,0 chr2 37014301 . G . PASS END=37014305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr2 37014306 . G . PASS END=37014307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 37014308 . G . PASS END=37014313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 37014314 . G . PASS END=37014314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:30,0 chr2 37014315 . C . PASS END=37014367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1117:0,80,255:34,0 chr2 37014368 . A . PASS END=37014380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,971:0,76,255:26,0 chr2 37014381 . T . PASS END=37014381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:24,0 chr2 37014382 . G . PASS END=37014402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr2 37014403 . G . PASS END=37014411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr2 37014412 . C . PASS END=37014418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:14:0,30,450:0,42,255:11,0 chr2 37014419 . G . PASS END=37014419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:9,0 chr2 37014932 . G . PASS END=37015022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1217:0,89,255:38,0 chr2 37028444 . A . PASS END=37028547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:38:0,90,1350:0,110,255:40,0 chr2 37032581 . G . PASS END=37032583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 37032584 . G . PASS END=37032584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 37032585 . G . PASS END=37032589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:26,0 chr2 37032590 . T . PASS END=37032592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr2 37032593 . C . PASS END=37032593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 37032594 . C . PASS END=37032784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1081:0,80,255:37,0 chr2 37032785 . T . PASS END=37032785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 37032786 . G . PASS END=37032787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 37032788 . A . PASS END=37032793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 37032794 . A . PASS END=37032798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 37032799 . G . PASS END=37032800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 37032801 . A . PASS END=37032803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 37032804 . C . PASS END=37032807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 37035615 . G . PASS END=37035628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr2 37035629 . A . PASS END=37035631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 37035632 . C . PASS END=37035632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 37035633 . G . PASS END=37035634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 37035635 . C . PASS END=37035660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,876:0,69,255:26,0 chr2 37035661 . G . PASS END=37035667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 37035668 . C . PASS END=37035670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 37035671 . C . PASS END=37035741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1098:0,88,255:36,0 chr2 37035742 . T . PASS END=37035742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:30,0 chr2 37035743 . G . PASS END=37035778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:34,0 chr2 37035779 . C . PASS END=37035814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr2 37035815 . C . PASS END=37035816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,65,255:19,0 chr2 37035817 . A . PASS END=37035825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:22,0 chr2 37035826 . C . PASS END=37035826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 37035827 . C . PASS END=37035832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr2 37035833 . C . PASS END=37035833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 37035834 . A . PASS END=37035840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 37035841 . A . PASS END=37035841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 37035842 . G . PASS END=37035855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:22,0 chr2 37035856 . A . PASS END=37035863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr2 37035864 . A . PASS END=37035864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:19,0 chr2 37035865 . C . PASS END=37035865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:19,0 chr2 37035866 . G . PASS END=37035866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 37035867 . C . PASS END=37035867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:19,0 chr2 37035868 . G . PASS END=37035868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 37035869 . C . PASS END=37035871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:23,0 chr2 37035872 . C . PASS END=37035872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 37035873 . G . PASS END=37035873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 37035874 . G . PASS END=37035874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,742:0,22,255:22,0 chr2 37035875 . G . PASS END=37035877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:23,0 chr2 37035878 . C . PASS END=37035878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 37035879 . G . PASS END=37035880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:24,0 chr2 37035881 . G . PASS END=37035884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr2 37035885 . T . PASS END=37035886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 37035887 . C . PASS END=37035892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:45:28:0,45,992:0,45,255:29,0 chr2 37035893 . C . PASS END=37035893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 37035894 . G . PASS END=37035895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr2 37035896 . A . PASS END=37035897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 37035898 . A . PASS END=37035899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:29,0 chr2 37035900 . C . PASS END=37035900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 37035901 . G . PASS END=37035908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:31,0 chr2 37035909 . T . PASS END=37035909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr2 37035910 . T . PASS END=37035912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:31,0 chr2 37035913 . G . PASS END=37035913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 37035914 . G . PASS END=37035915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 37035916 . T . PASS END=37035917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 37035918 . G . PASS END=37035921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:32,0 chr2 37035922 . A . PASS END=37035923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:34:0,95,1371:0,95,255:34,0 chr2 37035924 . T . PASS END=37035924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:32,0 chr2 37035925 . A . PASS END=37035925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:32,0 chr2 37035926 . C . PASS END=37035926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 37035927 . A . PASS END=37035927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr2 37035928 . G . PASS END=37036091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,89,255:39,0 chr2 37036092 . G . PASS END=37036105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 37036106 . A . PASS END=37036111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 37036112 . G . PASS END=37036116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr2 37036117 . C . PASS END=37036128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:17,0 chr2 37041326 . G . PASS END=37041336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1158:0,93,255:34,0 chr2 37041337 . T . PASS END=37041338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:34:0,69,1119:0,69,255:34,0 chr2 37041339 . T . PASS END=37041469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:35:0,81,1215:0,91,255:40,0 chr2 37041470 . T . PASS END=37041481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,85,255:26,0 chr2 37041482 . T . PASS END=37041482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:22,0 chr2 37041483 . C . PASS END=37041504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 37076599 . T . PASS END=37076631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:40:0,82,1512:0,82,255:40,0 chr2 37076632 . A . PASS END=37076733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,109,1731:0,109,255:40,0 chr2 37076734 . T . PASS END=37076768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,148,255:40,0 chr2 37076857 . T . PASS END=37076943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:47:0,110,1415:0,110,255:40,0 chr2 37078143 . C . PASS END=37078146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:40:0,87,1380:0,87,255:40,0 chr2 37078147 . A . PASS END=37078250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:44:0,85,1496:0,85,255:40,0 chr2 37082355 . T . PASS END=37082495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:42:0,93,1395:0,116,255:40,0 chr2 37084999 . C . PASS END=37084999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 37085000 . T . PASS END=37085001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr2 37085002 . T . PASS END=37085008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:25,0 chr2 37085009 . A . PASS END=37085012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 37085013 . A . PASS END=37085013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 37085014 . A . PASS END=37085019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1056:0,87,255:31,0 chr2 37085020 . T . PASS END=37085021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 37085022 . A . PASS END=37085165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:31:0,90,1157:0,91,255:40,0 chr2 37085166 . T . PASS END=37085166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:24,0 chr2 37088275 . C . PASS END=37088396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:35:0,89,1141:0,89,255:40,0 chr2 37094957 . T . PASS END=37094982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,121,255:40,0 chr2 37094983 . T . PASS END=37095004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,134,255:40,0 chr2 37096697 . T . PASS END=37096706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr2 37096707 . G . PASS END=37096872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:27:0,81,1000:0,81,255:40,0 chr2 37105034 . A . PASS END=37105034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr2 37105035 . T . PASS END=37105042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr2 37105043 . T . PASS END=37105043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr2 37105044 . A . PASS END=37105045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 37105046 . T . PASS END=37105046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 37105047 . G . PASS END=37105054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1113:0,93,255:31,0 chr2 37105055 . T . PASS END=37105055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 37105056 . T . PASS END=37105158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1142:0,80,255:39,0 chr2 37105159 . T . PASS END=37105170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1023:0,71,255:26,0 chr2 37111075 . C . PASS END=37111082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:30,0 chr2 37111083 . G . PASS END=37111152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1142:0,83,255:40,0 chr2 37111153 . A . PASS END=37111153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:40,0 chr2 37111154 . T . PASS END=37111161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1488:0,99,255:40,0 chr2 37111162 . G . PASS END=37111162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1468:0,77,255:40,0 chr2 37111163 . T . PASS END=37111163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:49:44:0,49,1345:0,49,255:36,0 chr2 37111164 . T . PASS END=37111174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:42:0,82,1275:0,82,255:40,0 chr2 37111175 . T . PASS END=37111175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1181:0,59,255:36,0 chr2 37111176 . C . PASS END=37111182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,103,1360:0,103,255:39,0 chr2 37111183 . T . PASS END=37111183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1118:0,61,255:33,0 chr2 37111184 . A . PASS END=37111184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:39:0,84,1274:0,84,255:33,0 chr2 37111185 . G . PASS END=37111185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1216:0,78,255:34,0 chr2 37111186 . C . PASS END=37111190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1228:0,81,255:33,0 chr2 37111191 . A . PASS END=37111191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:27,0 chr2 37111192 . T . PASS END=37111194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,94,255:29,0 chr2 37111195 . C . PASS END=37111195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1082:0,47,255:26,0 chr2 37111196 . T . PASS END=37111197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:29,0 chr2 37111198 . G . PASS END=37111210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,886:0,60,255:27,0 chr2 37111211 . A . PASS END=37111211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,695:0,9,255:19,0 chr2 37111212 . T . PASS END=37111215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,736:0,61,255:22,0 chr2 37111216 . G . PASS END=37111216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:19,0 chr2 37111217 . C . PASS END=37111217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr2 37111218 . C . PASS END=37111218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,799:0,45,255:18,0 chr2 37111663 . C . PASS END=37111749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:92:52:0,92,1536:0,92,255:40,0 chr2 37113859 . T . PASS END=37113969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:46:0,114,1710:0,138,255:40,0 chr2 37121041 . C . PASS END=37121176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:34:0,98,1175:0,98,255:40,0 chr2 37126666 . T . PASS END=37126801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,127,255:40,0 chr2 37129727 . G . PASS END=37129728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:30,0 chr2 37129729 . A . PASS END=37129882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:31:0,83,1082:0,83,255:40,0 chr2 37129883 . T . PASS END=37129887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:57:36:0,57,855:0,69,255:19,0 chr2 37129888 . T . PASS END=37129894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:22,0 chr2 37132683 . T . PASS END=37132761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:56:0,120,1800:0,164,255:40,0 chr2 37143221 . C . PASS END=37143239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,120,1800:0,132,255:40,0 chr2 37143240 . C . PASS END=37143240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:51:58:0,51,1480:0,51,255:40,0 chr2 37143241 . T . PASS END=37143294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:54:0,120,1800:0,127,255:40,0 chr2 37152248 . C . PASS END=37152345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:35:0,90,1350:0,102,255:40,0 chr2 37152346 . C . PASS END=37152346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 37152347 . T . PASS END=37152351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 37193373 . C . PASS END=37193391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:19,0 chr2 37193392 . A . PASS END=37193412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:24,0 chr2 37193413 . A . PASS END=37193413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 37193414 . C . PASS END=37193427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr2 37193428 . C . PASS END=37193469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:19,0 chr2 37193470 . T . PASS END=37193487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 37193488 . G . PASS END=37193488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 37193489 . C . PASS END=37193492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:12,0 chr2 37193493 . A . PASS END=37193493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 37193494 . G . PASS END=37193526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:13,0 chr2 37193527 . A . PASS END=37193527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 37193528 . G . PASS END=37193539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 37193540 . C . PASS END=37193549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,523:0,48,255:16,0 chr2 37193550 . G . PASS END=37193550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,504:0,4,255:14,0 chr2 37193551 . C . PASS END=37193576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:16,0 chr2 37193577 . G . PASS END=37193577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 37193578 . A . PASS END=37193578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 37193579 . A . PASS END=37193594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 37193595 . C . PASS END=37193603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 37193604 . C . PASS END=37193604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr2 37193605 . A . PASS END=37193606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 37195611 . T . PASS END=37195622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,344:0,33,255:12,0 chr2 37195623 . T . PASS END=37195647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 37195648 . G . PASS END=37195648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 37195649 . G . PASS END=37195652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 37195653 . G . PASS END=37195656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 37195657 . A . PASS END=37195657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 37195658 . C . PASS END=37195669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,754:0,63,255:23,0 chr2 37195670 . A . PASS END=37195671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 37195672 . T . PASS END=37195696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr2 37195697 . G . PASS END=37195731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,544:0,48,255:19,0 chr2 37195732 . T . PASS END=37195744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 37208633 . T . PASS END=37208640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 37208641 . A . PASS END=37208641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 37208642 . A . PASS END=37208643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,708:0,66,255:22,0 chr2 37208644 . T . PASS END=37208644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 37208645 . T . PASS END=37208652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 37208653 . G . PASS END=37208653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr2 37208654 . C . PASS END=37208656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 37208657 . A . PASS END=37208657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:22,0 chr2 37208658 . A . PASS END=37208661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 37208662 . T . PASS END=37208662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 37208663 . T . PASS END=37208669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,962:0,75,255:26,0 chr2 37208670 . G . PASS END=37208670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 37208671 . A . PASS END=37208671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr2 37208672 . A . PASS END=37208912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:32:0,90,1178:0,90,255:40,0 chr2 37208913 . A . PASS END=37208913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1309:0,73,255:34,0 chr2 37208914 . C . PASS END=37208934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,107,255:37,0 chr2 37208935 . C . PASS END=37208937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:34:0,69,1035:0,102,255:25,0 chr2 37215789 . T . PASS END=37216001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:35:0,87,1305:0,101,255:40,0 chr2 37216002 . C . PASS END=37216002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr2 37217791 . C . PASS END=37217927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:49:0,87,1305:0,107,255:40,0 chr2 37217928 . T . PASS END=37217942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:24:0,63,945:0,67,255:26,0 chr2 37227729 . C . PASS END=37227735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1008:0,81,255:32,0 chr2 37227736 . A . PASS END=37227736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr2 37227737 . G . PASS END=37227956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:34:0,92,1070:0,92,255:40,1 chr2 37229449 . C . PASS END=37229676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1053:0,87,255:40,0 chr2 37229677 . C . PASS END=37229700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:25,0 chr2 37229701 . C . PASS END=37229701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr2 37229702 . C . PASS END=37229702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 37229703 . A . PASS END=37229707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 37229708 . A . PASS END=37229708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:17,0 chr2 37229709 . T . PASS END=37229715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,52,255:19,0 chr2 37230685 . T . PASS END=37230688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:33,0 chr2 37230689 . A . PASS END=37230689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1067:0,63,255:32,0 chr2 37230690 . G . PASS END=37230690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 37230691 . T . PASS END=37230708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:35:0,98,1245:0,98,255:38,0 chr2 37230709 . A . PASS END=37230709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr2 37230710 . A . PASS END=37230727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1389:0,101,255:40,0 chr2 37230728 . T C, 44.54 PASS DP=43;MQ=250.00;MQRankSum=5.415;ReadPosRankSum=2.425;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,16,0:0.372,0.000:43:17,7,0:10,9,0:44:79,0,50,564,934,1498:255,0,255:28,0:4.4543e+01,1.7422e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,12,10,6:13,14,9,7 chr2 37230729 . A . PASS END=37230765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:44:0,120,1800:0,122,255:40,0 chr2 37230766 . C . PASS END=37230795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:41:0,99,1485:0,119,255:40,0 chr2 37230796 . G . PASS END=37230796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:32,0 chr2 37230797 . G . PASS END=37230810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1350:0,102,255:33,0 chr2 37230811 . G . PASS END=37230821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:32:0,63,945:0,96,255:23,0 chr2 37230822 . C . PASS END=37230829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr2 37232775 . C . PASS END=37232897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1350:0,90,255:40,0 chr2 37232898 . C . PASS END=37232902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:26,0 chr2 37234193 . C . PASS END=37234193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1217:0,99,255:33,0 chr2 37234194 . T . PASS END=37234194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1086:0,52,255:31,0 chr2 37234195 . A . PASS END=37234376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1181:0,86,255:40,0 chr2 37234377 . A . PASS END=37234377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:26:42:0,26,1064:0,26,255:31,0 chr2 37234378 . A . PASS END=37234417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1188:0,84,255:40,0 chr2 37234418 . C . PASS END=37234418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1080:0,69,255:28,0 chr2 37234419 . A . PASS END=37234421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,85,255:30,0 chr2 37234422 . A . PASS END=37234431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:32:0,66,1080:0,66,255:26,0 chr2 37234432 . G . PASS END=37234432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1013:0,46,255:24,0 chr2 37234433 . T . PASS END=37234433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,972:0,56,255:20,0 chr2 37234434 . A . PASS END=37234439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr2 37234440 . T . PASS END=37234446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:27:0,42,630:0,54,255:19,0 chr2 37234447 . C . PASS END=37234447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:39:28:0,39,585:0,84,255:13,0 chr2 37235754 . C . PASS END=37235754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:31,0 chr2 37235755 . A . PASS END=37235764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:34:0,92,1152:0,92,255:36,0 chr2 37235765 . A . PASS END=37235765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr2 37235766 . G . PASS END=37235991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:38:0,84,1300:0,84,255:40,0 chr2 37240984 . C . PASS END=37240985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 37240986 . C . PASS END=37241012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1016:0,81,255:40,0 chr2 37241013 . T . PASS END=37241049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:40:0,91,1432:0,91,255:40,0 chr2 37241050 . G A, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.598;ReadPosRankSum=3.345;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,29,0:0.630,0.000:46:9,17,0:8,12,0:45:85,0,44,1034,600,1635:255,0,255:17,0:5.0000e+01,1.2969e-04,4.7014e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,16,13:9,8,10,19 chr2 37241051 . G . PASS END=37241087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,102,1670:0,102,255:40,0 chr2 37241088 . A . PASS END=37241142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:38:0,84,1260:0,90,255:40,0 chr2 37241143 . T . PASS END=37241143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:27,0 chr2 37241144 . C . PASS END=37241145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1164:0,83,255:28,0 chr2 37241146 . T . PASS END=37241146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:26,0 chr2 37241147 . A . PASS END=37241147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 37241148 . T . PASS END=37241153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,73,255:24,0 chr2 37241154 . T . PASS END=37241163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:22:0,48,720:0,62,255:18,0 chr2 37246952 . C . PASS END=37247020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:52:0,120,1800:0,140,255:40,0 chr2 37247798 . A . PASS END=37247798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 37247799 . T . PASS END=37247801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,615:0,43,255:19,0 chr2 37247802 . G . PASS END=37247806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 37247807 . A . PASS END=37247814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:31,0 chr2 37247815 . C . PASS END=37247815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:29,0 chr2 37247816 . C . PASS END=37247937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,82,255:39,0 chr2 37247938 . C . PASS END=37247945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr2 37247946 . A . PASS END=37247946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,925:0,35,255:21,0 chr2 37247947 . T . PASS END=37247962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:20:0,42,630:0,44,255:19,0 chr2 37247963 . A . PASS END=37247963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:36:20:0,36,540:0,43,255:11,0 chr2 37247964 . A . PASS END=37247974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:21:14:0,21,315:0,37,255:8,0 chr2 37247975 . G . PASS END=37247977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 37247978 . A . PASS END=37247979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 37255066 . T . PASS END=37255080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,645:0,54,255:19,0 chr2 37255081 . G . PASS END=37255081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 37255082 . T . PASS END=37255084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 37255085 . A . PASS END=37255099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 37255100 . G . PASS END=37255102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 37255103 . A . PASS END=37255110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:28,0 chr2 37255111 . A . PASS END=37255142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:31,0 chr2 37255143 . A . PASS END=37255143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 37255144 . T . PASS END=37255307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:33:0,87,1305:0,91,255:40,0 chr2 37255308 . G . PASS END=37255317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:34:0,66,990:0,78,255:26,0 chr2 37255824 . C . PASS END=37255843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,107,1430:0,107,255:40,0 chr2 37255844 . T . PASS END=37256063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:30:0,84,1255:0,86,255:40,0 chr2 37259772 . T . PASS END=37259774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr2 37259775 . C . PASS END=37259890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:29:0,80,1086:0,80,255:40,0 chr2 37259891 . A . PASS END=37259891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1288:0,48,255:33,0 chr2 37259892 . A . PASS END=37259900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1440:0,104,255:36,0 chr2 37259901 . A . PASS END=37259914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:25:0,69,1035:0,75,255:26,0 chr2 37259915 . A . PASS END=37259915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 37259916 . C . PASS END=37259916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 37264998 . A . PASS END=37265002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 37265003 . G . PASS END=37265005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 37265006 . T . PASS END=37265008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 37265009 . G . PASS END=37265044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:29:0,81,1160:0,83,255:39,0 chr2 37265045 . A . PASS END=37265045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1143:0,70,255:36,0 chr2 37265046 . C . PASS END=37265141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1215:0,90,255:40,0 chr2 37265142 . A . PASS END=37265152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:29:0,63,945:0,70,255:27,0 chr2 37265153 . T . PASS END=37265155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,72,255:18,0 chr2 37265156 . T . PASS END=37265167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:17,0 chr2 37267472 . C . PASS END=37267634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1098:0,87,255:40,0 chr2 37267635 . C . PASS END=37267643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,1149:0,60,255:26,0 chr2 37267644 . T . PASS END=37267645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 37267646 . A . PASS END=37267661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:25,0 chr2 37268276 . C . PASS END=37268407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:31:0,81,1119:0,93,255:40,0 chr2 37268408 . A . PASS END=37268409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:78:50:0,78,1170:0,150,255:26,0 chr2 37268410 . A . PASS END=37268417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:27,0 chr2 37268418 . T . PASS END=37268421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:25,0 chr2 37268422 . G . PASS END=37268422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:23:28:0,23,894:0,23,255:23,0 chr2 37268423 . A . PASS END=37268435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,870:0,61,255:23,0 chr2 37276796 . T . PASS END=37276942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:30:0,80,1185:0,80,255:40,0 chr2 37276943 . C . PASS END=37276943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:29,0 chr2 37276944 . G . PASS END=37276944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:28,0 chr2 37276945 . A . PASS END=37276945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 37276946 . A . PASS END=37276949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:32:0,66,1011:0,66,255:25,0 chr2 37276950 . C . PASS END=37276950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:24,0 chr2 37276951 . C . PASS END=37276951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:24,0 chr2 37276952 . T . PASS END=37276952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1108:0,41,255:24,0 chr2 37276953 . C . PASS END=37276953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:19:32:0,19,1086:0,19,255:24,0 chr2 37276954 . A . PASS END=37276954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:24,0 chr2 37276955 . G . PASS END=37276955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:25,0 chr2 37276956 . G . PASS END=37276956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,961:0,37,255:23,0 chr2 37276957 . T . PASS END=37276957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr2 37276958 . C . PASS END=37276958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,878:0,7,255:26,0 chr2 37276959 . C . PASS END=37276959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:25,0 chr2 37276960 . T . PASS END=37276960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,897:0,12,255:24,0 chr2 37276961 . A . PASS END=37276961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:26,0 chr2 37276962 . A . PASS END=37276963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:24,0 chr2 37276964 . G . PASS END=37276964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:35:28:0,35,920:0,35,255:21,0 chr2 37276965 . T . PASS END=37276965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 37276966 . A . LowGQ END=37276967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,798:0,0,255:21,0 chr2 37276968 . T . PASS END=37276971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 37276972 . G . LowGQ END=37276972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:29:0,0,809:7,0,255:20,0 chr2 37276973 . T . PASS END=37276973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:22,0 chr2 37276974 . T . PASS END=37276976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:20,0 chr2 37276977 . C . PASS END=37276977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,765:0,15,255:15,0 chr2 37276978 . A . PASS END=37276978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:17,0 chr2 37276979 . G . PASS END=37276979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,806:0,9,255:14,0 chr2 37276980 . C . PASS END=37276980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,630:0,42,255:13,0 chr2 37276981 . T . PASS END=37276981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:32:27:0,32,865:0,32,255:11,0 chr2 37276982 . A . PASS END=37276983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,861:0,26,255:8,0 chr2 37276984 . G . PASS END=37276984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:1:27:0,1,759:0,1,255:6,0 chr2 37276985 . C . PASS END=37276985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:30:27:0,30,450:0,34,255:8,0 chr2 37276986 . C . PASS END=37276986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:27:26:0,27,405:0,47,255:8,0 chr2 37280645 . C . PASS END=37280750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1093:0,84,255:40,0 chr2 37283583 . C . PASS END=37283595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:20,0 chr2 37283596 . A . PASS END=37283596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr2 37283597 . A . PASS END=37283601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 37283602 . G . PASS END=37283602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 37283603 . A . PASS END=37283629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,720:0,63,255:25,0 chr2 37283630 . A . PASS END=37283630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:24,0 chr2 37283631 . G . PASS END=37283649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,939:0,71,255:26,0 chr2 37283650 . C . PASS END=37283663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,995:0,84,255:29,0 chr2 37283664 . G . PASS END=37283678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 37283679 . T . PASS END=37283679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,835:0,45,255:23,0 chr2 37283680 . C . PASS END=37283714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,876:0,61,255:26,0 chr2 37283715 . T . PASS END=37283715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,714:0,25,255:19,0 chr2 37283716 . C . PASS END=37283734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:22,0 chr2 37283735 . T . PASS END=37283753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr2 37283754 . T . PASS END=37283754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:16,0 chr2 37283755 . G . PASS END=37283758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr2 37284460 . C . PASS END=37284618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:36:0,87,1305:0,93,255:40,0 chr2 37284619 . A . PASS END=37284619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:30,0 chr2 37284620 . G . PASS END=37284623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 37285594 . C . PASS END=37285703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,111,1665:0,123,255:40,0 chr2 37286031 . T . PASS END=37286130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:97:46:0,97,1650:0,97,255:40,0 chr2 37287724 . C . PASS END=37287870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1260:0,91,255:40,0 chr2 37287871 . A . PASS END=37287876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:26,0 chr2 37289082 . C . PASS END=37289192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1215:0,93,255:40,0 chr2 37289193 . T . PASS END=37289193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr2 37291883 . C . PASS END=37292094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:28:0,80,1033:0,80,255:40,0 chr2 37292095 . T . PASS END=37292115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,71,255:26,0 chr2 37292116 . T . PASS END=37292116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 37292117 . C . PASS END=37292133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 37292898 . C . PASS END=37292903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr2 37292904 . A . PASS END=37292905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,435:0,25,255:14,0 chr2 37292906 . G . PASS END=37292935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:18,0 chr2 37292936 . T . PASS END=37292938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 37292939 . A . PASS END=37292940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 37292941 . G . PASS END=37292942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 37292943 . T . PASS END=37292943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 37292944 . C . PASS END=37292961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,955:0,72,255:26,0 chr2 37292962 . T . PASS END=37292971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 37292972 . G . PASS END=37292999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:24:0,65,900:0,65,255:26,0 chr2 37293000 . C . PASS END=37293000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 37293001 . A . PASS END=37293032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,722:0,60,255:22,0 chr2 37293033 . T . PASS END=37293037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 37293038 . T . PASS END=37293053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:13:0,36,540:0,39,255:13,0 chr2 37295824 . C . PASS END=37295839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:22,0 chr2 37295840 . T . PASS END=37295840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr2 37295841 . T . PASS END=37295849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,886:0,61,255:26,0 chr2 37295850 . G . PASS END=37295853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr2 37295854 . G . PASS END=37295854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 37295855 . G . PASS END=37295856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 37295857 . A . PASS END=37295857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 37295858 . G . PASS END=37295858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 37295859 . A . PASS END=37295859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,895:0,45,255:27,0 chr2 37295860 . T . PASS END=37296045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:28:0,80,1055:0,80,255:40,0 chr2 37296046 . C . PASS END=37296073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 37297373 . C . PASS END=37297529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:34:0,87,1305:0,102,255:40,0 chr2 37297530 . A . PASS END=37297530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:28,0 chr2 37299253 . C . PASS END=37299405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:34:0,81,1215:0,102,255:40,0 chr2 37299406 . T . PASS END=37299406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:26,0 chr2 37299407 . C . PASS END=37299407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 37299408 . T . PASS END=37299423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,68,255:25,0 chr2 37299424 . A . PASS END=37299424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr2 37302628 . C . PASS END=37302773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:32:0,81,1172:0,96,255:40,0 chr2 37302774 . G . PASS END=37302777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:63:38:0,63,945:0,114,255:24,0 chr2 37304054 . C . PASS END=37304162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,142,255:40,0 chr2 37306263 . A . PASS END=37306305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:45:0,120,1800:0,134,255:40,0 chr2 37306306 . T . PASS END=37306342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,157,255:40,0 chr2 37306343 . G A, 266.70 PASS DP=73;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,73,0:1.000,0.000:73:0,31,0:0,42,0:217:304,220,0,2799,220,2799:255,220,0:0,0:2.6670e+02,2.1670e+02,0.0000e+00,4.5000e+02,2.5147e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,36:0,0,37,36 chr2 37306344 . A . PASS END=37306380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,185,255:40,0 chr2 37306381 . T . PASS END=37306474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:47:0,111,1665:0,125,255:40,0 chr2 37310432 . C . PASS END=37310557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:44:0,106,1755:0,106,255:40,0 chr2 37311661 . A . PASS END=37311668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,621:0,41,255:19,0 chr2 37311669 . C . PASS END=37311683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:26,0 chr2 37311684 . G . PASS END=37311684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 37311685 . C . PASS END=37311686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 37311687 . G . PASS END=37311698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 37311699 . G . PASS END=37311699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 37311700 . C . PASS END=37311700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 37311701 . A . PASS END=37311701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr2 37311702 . G . PASS END=37311713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1116:0,87,255:29,0 chr2 37315512 . A . PASS END=37315583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:47:0,120,1800:0,141,255:40,0 chr2 37316783 . A . PASS END=37316784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:33:0,83,1156:0,83,255:36,0 chr2 37316785 . A . PASS END=37316785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1071:0,64,255:35,0 chr2 37316786 . A . PASS END=37317009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:82:40:0,82,1383:0,82,255:40,0 chr2 37317824 . G . PASS END=37317831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:113:0,120,1800:0,255,255:40,0 chr2 37317832 . A . PASS END=37317868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:103:0,120,1800:0,255,255:40,0 chr2 37317869 . C T, 353.99 PASS DP=102;MQ=249.55;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,102,0:1.000,0.000:102:0,46,0:0,56,0:304:392,307,0,3939,307,3939:255,255,0:0,0:3.5399e+02,3.0399e+02,0.0000e+00,4.4853e+02,3.3876e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,52,50:0,0,50,52 chr2 37319059 . G . PASS END=37319179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,120,1800:0,127,255:40,0 chr2 37319284 . T . PASS END=37319398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:38:0,96,1440:0,114,255:40,0 chr2 37321225 . A . PASS END=37321338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,122,255:40,0 chr2 37322580 . G . PASS END=37322661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:53:0,120,1800:0,159,255:40,0 chr2 37323351 . A . PASS END=37323406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,104,1698:0,104,255:40,0 chr2 37334416 . C . PASS END=37334538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,122,255:40,2 chr2 37334617 . T . PASS END=37334670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,115,1434:0,115,255:40,0 chr2 37336337 . C . PASS END=37336438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:38:0,97,1281:0,97,255:40,0 chr2 37341874 . C . PASS END=37342002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:61:0,120,1800:0,161,255:40,0 chr2 37347102 . C . PASS END=37347105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,167,255:40,0 chr2 37347106 . A . PASS END=37347279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:87:45:0,87,1305:0,135,255:40,0 chr2 37347280 . G . PASS END=37347282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:75:44:0,75,1125:0,80,255:26,0 chr2 37349649 . C . PASS END=37349653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1111:0,82,255:33,0 chr2 37349654 . A . PASS END=37349654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,929:0,68,255:32,0 chr2 37349655 . C . PASS END=37349791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:34:0,89,1271:0,89,255:40,0 chr2 37349792 . T . PASS END=37349792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1309:0,73,255:35,0 chr2 37349793 . T . PASS END=37349807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1396:0,87,255:36,0 chr2 37353432 . T . PASS END=37353554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:65:0,120,1800:0,192,255:40,0 chr2 37362627 . C . PASS END=37362689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:56:0,120,1800:0,121,255:40,0 chr2 37364126 . C . PASS END=37364160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:97:0,120,1800:0,241,255:40,0 chr2 37365413 . C . PASS END=37365506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:46:0,102,1659:0,102,255:40,0 chr2 37365652 . A . PASS END=37365728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,115,1800:0,115,255:40,0 chr2 37366774 . C . PASS END=37366900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:82:41:0,82,1298:0,82,255:40,0 chr2 37368696 . C . PASS END=37368699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:25:0,72,1056:0,75,255:30,0 chr2 37368700 . C . PASS END=37368711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1225:0,86,255:34,0 chr2 37368712 . C . PASS END=37368712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:35,0 chr2 37368713 . C . PASS END=37368844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:37:0,87,1305:0,96,255:40,0 chr2 37373996 . C . PASS END=37374025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,159,255:40,0 chr2 37374026 . T . PASS END=37374116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,144,255:40,0 chr2 37374831 . C . PASS END=37374949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,102,1614:0,102,255:40,0 chr2 37395078 . T . PASS END=37395208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,116,1604:0,116,255:40,0 chr2 37398577 . C . PASS END=37398579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,873:0,81,255:28,0 chr2 37398580 . T . PASS END=37398580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 37398581 . G . PASS END=37398581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 37398582 . C . PASS END=37398582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 37398583 . G . PASS END=37398583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 37398584 . G . PASS END=37398584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 37398585 . A . PASS END=37398707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,1119:0,80,255:40,0 chr2 37398708 . A . PASS END=37398721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:21:0,60,900:0,63,255:21,0 chr2 37398722 . A . PASS END=37398733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,698:0,46,255:18,0 chr2 37402275 . C . PASS END=37402307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,156,255:40,0 chr2 37402308 . A . PASS END=37402335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:75:0,120,1800:0,225,255:40,0 chr2 37402336 . T . PASS END=37402369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:78:0,120,1800:0,194,255:40,0 chr2 37406601 . C . PASS END=37406727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,142,255:40,2 chr2 37410568 . C . PASS END=37410574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,148,255:40,0 chr2 37410575 . T . PASS END=37410657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,152,255:40,0 chr2 37414498 . C . PASS END=37414610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:68:0,120,1800:0,158,255:40,0 chr2 37415585 . C . PASS END=37415718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:41:0,93,1311:0,93,255:40,0 chr2 37415719 . G . PASS END=37415719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,10:79:56:79:0,56,1940:0,56,255:40,0 chr2 37415720 . C . PASS END=37415783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,120,1800:0,141,255:40,0 chr2 37426848 . A . PASS END=37426962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,108,1620:0,112,255:40,2 chr2 37428191 . A . PASS END=37428235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:83:0,120,1800:0,216,255:40,0 chr2 37428785 . T . PASS END=37428867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:50:0,112,1792:0,112,255:40,0 chr2 37428907 . T . PASS END=37429046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,1:122:99:71:0,120,1800:0,200,255:40,0 chr2 37429927 . T . PASS END=37430008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:34:0,84,1160:0,84,255:40,0 chr2 37430093 . C . PASS END=37430151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,220,255:40,0 chr2 37438142 . C . PASS END=37438225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,145,255:40,0 chr2 37438986 . C . PASS END=37438992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,134,255:40,0 chr2 37438993 . G A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.931;ReadPosRankSum=3.911;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,30,0:0.600,0.000:50:7,19,0:13,11,0:47:85,0,47,1007,677,1685:255,0,255:18,0:5.0000e+01,9.1378e-05,4.9568e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,5,23,7:6,14,16,14 chr2 37438994 . C . PASS END=37439030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,120,1800:0,134,255:40,0 chr2 37439031 . C . PASS END=37439182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:37:0,108,1620:0,111,255:40,0 chr2 37439478 . C . PASS END=37439535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:100:0,120,1800:0,255,255:40,0 chr2 37441007 . C . PASS END=37441104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:91:0,120,1800:0,231,255:40,0 chr2 37442029 . C . PASS END=37442095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,3:93:99:80:0,120,1800:0,211,255:40,0 chr2 37443283 . C . PASS END=37443351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:84:0,120,1800:0,253,255:40,0 chr2 37443459 . C . PASS END=37443559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:31:0,90,1350:0,93,255:40,0 chr2 37443560 . C . PASS END=37443560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 37443561 . C . PASS END=37443561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 37444127 . C . PASS END=37444180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,162,255:40,0 chr2 37447528 . C . PASS END=37447616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,141,255:40,0 chr2 37449523 . C . PASS END=37449524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 37449525 . T . PASS END=37449525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr2 37449526 . T . PASS END=37449527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 37449528 . A . PASS END=37449530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,856:0,64,255:26,0 chr2 37449531 . T . PASS END=37449531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:30,0 chr2 37449532 . T . PASS END=37449533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 37449534 . T . PASS END=37449534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 37449535 . C . PASS END=37449535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr2 37449536 . A . PASS END=37449536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1040:0,54,255:30,0 chr2 37449537 . A . PASS END=37449706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:35:0,91,1202:0,91,255:40,0 chr2 37450313 . C . PASS END=37450544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:80:40:0,80,1488:0,80,255:40,0 chr2 37454687 . C . PASS END=37455421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:87:34:0,87,1291:0,91,255:40,2 chr2 37455422 . C . PASS END=37455422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr2 37455423 . T . PASS END=37455994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:35:0,80,1132:0,80,255:40,0 chr2 37455995 . C . PASS END=37456031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:88:0,120,1800:0,208,255:40,0 chr2 37456032 . C T, 313.02 PASS DP=89;MQ=249.02;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,89,0:1.000,0.000:89:0,43,0:0,46,0:263:351,266,0,3315,266,3315:255,255,0:0,0:3.1302e+02,2.6302e+02,0.0000e+00,4.4853e+02,2.9779e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,54:0,0,43,46 chr2 37456033 . T . PASS END=37456069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:87:0,120,1800:0,200,255:40,0 chr2 37456070 . T . PASS END=37456161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:46:0,117,1755:0,124,255:40,0 chr2 37456162 . C . PASS END=37456165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:45:0,78,1170:0,135,255:26,0 chr2 37456166 . A . PASS END=37456179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:48:20:0,48,720:0,60,255:19,0 chr2 37458416 . C . PASS END=37458420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 37458421 . A . LowGQ END=37458421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:7,0 chr2 37458422 . C . PASS END=37458423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 37458424 . T . PASS END=37458424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 37458555 . C . PASS END=37458555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr2 37458556 . T . PASS END=37458556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr2 37458557 . T . PASS END=37458560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 37458561 . G . PASS END=37458561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 37458562 . C . PASS END=37458578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1188:0,86,255:34,0 chr2 37458579 . T . PASS END=37458579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:32,0 chr2 37458580 . T . PASS END=37458590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1302:0,89,255:35,0 chr2 37458591 . G . PASS END=37458591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr2 37458592 . A . PASS END=37458597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1335:0,95,255:35,0 chr2 37458598 . T . PASS END=37458598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:35,0 chr2 37458599 . T . PASS END=37458636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:36:0,97,1335:0,97,255:40,0 chr2 37458637 . G . PASS END=37458637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:35,0 chr2 37458638 . G . PASS END=37458673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,98,255:37,0 chr2 37458674 . T . PASS END=37458681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:34,0 chr2 37458682 . A . PASS END=37458682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:31,0 chr2 37458683 . A . PASS END=37458688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:29,0 chr2 37458689 . A . PASS END=37458695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1125:0,92,255:26,0 chr2 37458696 . C . PASS END=37458696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 37458697 . T . PASS END=37458710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,1030:0,63,255:26,0 chr2 37458849 . A . PASS END=37458903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:33:0,90,1288:0,92,255:39,0 chr2 37459249 . C . PASS END=37459388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:30:0,80,1109:0,80,255:40,0 chr2 37459389 . G . PASS END=37459389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1036:0,71,255:29,0 chr2 37459390 . T . PASS END=37459406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1119:0,80,255:31,0 chr2 37459407 . A . PASS END=37459409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 37463239 . G . PASS END=37463319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:61:0,120,1800:0,183,255:40,0 chr2 37464900 . C . PASS END=37464999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1141:0,82,255:40,0 chr2 37465000 . A . PASS END=37465000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,897:0,59,255:27,0 chr2 37465001 . T . PASS END=37465003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 37465004 . T . PASS END=37465004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 37465005 . T . PASS END=37465006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 37465007 . G . PASS END=37465007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 37465008 . A . PASS END=37465010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 37468721 . G . PASS END=37468934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:38:0,93,1382:0,93,255:40,0 chr2 37469778 . G . PASS END=37469836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:97:0,120,1800:0,255,255:40,0 chr2 37471006 . A . PASS END=37471116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:32:0,90,1350:0,96,255:40,0 chr2 37473195 . C . PASS END=37473195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr2 37473196 . A . PASS END=37473199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 37473200 . C . PASS END=37473200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr2 37473201 . G . PASS END=37473201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 37473202 . A . PASS END=37473202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 37473203 . A . PASS END=37473206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 37473207 . A . PASS END=37473208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1049:0,62,255:29,0 chr2 37473209 . G . PASS END=37473209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1025:0,41,255:29,0 chr2 37473210 . G . PASS END=37473210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:31,0 chr2 37473211 . A . PASS END=37473211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr2 37473212 . T . PASS END=37473212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1042:0,65,255:31,0 chr2 37473213 . C . PASS END=37473213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:31,0 chr2 37473214 . A . PASS END=37473338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:34:0,81,1215:0,92,255:40,0 chr2 37474599 . G . PASS END=37474599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 37474600 . G . PASS END=37474600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:34,0 chr2 37474601 . G . PASS END=37474772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:38:0,84,1236:0,84,255:40,0 chr2 37475278 . G . PASS END=37475444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:34:0,81,1215:0,89,255:40,0 chr2 37475445 . A . PASS END=37475468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,67,255:25,0 chr2 37475469 . G . PASS END=37475469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 37475470 . T . PASS END=37475477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 37475478 . A . PASS END=37475479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,746:0,52,255:20,0 chr2 37475480 . T . PASS END=37475487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 37475488 . C . PASS END=37475493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 37480320 . T . PASS END=37480493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:87:37:0,87,1305:0,95,255:40,0 chr2 37481347 . C . PASS END=37481432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,149,255:40,0 chr2 37483805 . C . PASS END=37483805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,812:0,64,255:26,0 chr2 37483806 . T . PASS END=37483806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,923:0,50,255:26,0 chr2 37483807 . T . PASS END=37483807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 37483808 . C . PASS END=37483808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:25,0 chr2 37483809 . A . PASS END=37483811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,820:0,64,255:27,0 chr2 37483812 . A . PASS END=37483812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 37483813 . G . PASS END=37483814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:31:29:0,31,813:0,31,255:28,0 chr2 37483815 . A . PASS END=37483819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:29,0 chr2 37483820 . C . PASS END=37483821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,739:0,56,255:28,0 chr2 37483822 . C . PASS END=37483822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:29,0 chr2 37483823 . T . PASS END=37483823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 37483824 . C . PASS END=37483824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 37483825 . C . PASS END=37483825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr2 37483826 . A . PASS END=37483826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1013:0,57,255:31,0 chr2 37483827 . T . PASS END=37483827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 37483828 . G . PASS END=37483829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:44:33:0,44,1094:0,44,255:35,0 chr2 37483830 . A . PASS END=37483830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,5:37:28:37:0,28,1039:0,28,255:32,0 chr2 37483831 . T . PASS END=37483832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 37483833 . T . PASS END=37483833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1173:0,78,255:35,0 chr2 37483834 . G . PASS END=37483836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1260:0,94,255:36,0 chr2 37483837 . G . PASS END=37483837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:36,0 chr2 37483838 . G . PASS END=37483841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:37:0,80,1238:0,80,255:39,0 chr2 37483842 . C . PASS END=37483842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1388:0,73,255:38,0 chr2 37483843 . A . PASS END=37483843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 37483844 . T . PASS END=37483844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1335:0,65,255:38,0 chr2 37483845 . A . PASS END=37483851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:40:0,103,1320:0,103,255:40,0 chr2 37483852 . G . PASS END=37483852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1365:0,76,255:37,0 chr2 37483853 . C . PASS END=37483884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:40:0,90,1385:0,90,255:40,0 chr2 37483885 . T . PASS END=37483885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1288:0,48,255:37,0 chr2 37483886 . C . PASS END=37484070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,89,255:40,0 chr2 37484071 . A . PASS END=37484072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 37486726 . C . PASS END=37486824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:49:0,109,1800:0,109,255:40,0 chr2 37487366 . C . PASS END=37487378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,124,255:40,0 chr2 37487379 . A . PASS END=37487527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:55:0,120,1800:0,132,255:40,0 chr2 37494573 . C . PASS END=37494590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,137,255:40,0 chr2 37494591 . A G, 47.91 PASS DP=73;MQ=250.00;MQRankSum=7.260;ReadPosRankSum=1.233;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,31,0:0.425,0.000:73:14,16,0:28,15,0:47:83,0,50,1035,1502,2537:255,0,255:40,0:4.7911e+01,9.1896e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,18,18,13:20,22,15,16 chr2 37494592 . T . PASS END=37494628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:74:0,120,1800:0,192,255:40,0 chr2 37494629 . T . PASS END=37494679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:57:0,120,1800:0,124,255:40,0 chr2 37495444 . C . PASS END=37495515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1155:0,80,255:36,0 chr2 37496758 . C . PASS END=37496830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,142,255:40,0 chr2 37499523 . C . PASS END=37499575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,191,255:40,0 chr2 37501564 . T . PASS END=37501564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 37501565 . G . PASS END=37501565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 37501566 . T . PASS END=37501567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 37501568 . A . PASS END=37501568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 37501569 . T . PASS END=37501573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr2 37501574 . C . PASS END=37501575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 37501576 . C . PASS END=37501578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 37501579 . G . PASS END=37501586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1155:0,83,255:35,0 chr2 37501587 . G . PASS END=37501587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr2 37501588 . A . PASS END=37501588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1228:0,105,255:35,0 chr2 37501589 . A . PASS END=37501589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 37501590 . G . PASS END=37501840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:91:35:0,91,1122:0,91,255:40,0 chr2 37502910 . C . PASS END=37502987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:59:0,120,1800:0,167,255:40,0 chr2 37505009 . C . PASS END=37505122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:32:0,84,1260:0,96,255:40,0 chr2 37505123 . T . PASS END=37505123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:24,0 chr2 37505124 . G . PASS END=37505132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,70,255:26,0 chr2 37506889 . C . PASS END=37507052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:34:0,84,1260:0,87,255:40,0 chr2 37507053 . T . PASS END=37507068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 37507069 . G . PASS END=37507072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 37509685 . C . PASS END=37509762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:56:0,120,1800:0,168,255:40,0 chr2 37513320 . C . PASS END=37513321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 37513322 . T . PASS END=37513510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1055:0,84,255:40,0 chr2 37513511 . G . PASS END=37513512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 37516499 . C . PASS END=37516656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:36:0,87,1305:0,95,255:40,0 chr2 37518011 . C . PASS END=37518015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 37518016 . C . PASS END=37518018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:23,0 chr2 37518019 . T . PASS END=37518019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 37518020 . T . PASS END=37518027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,869:0,65,255:26,0 chr2 37518028 . T . PASS END=37518036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 37518037 . A . PASS END=37518037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,931:0,32,255:27,0 chr2 37518038 . A . PASS END=37518038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1076:0,87,255:29,0 chr2 37518039 . T . PASS END=37518039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 37518040 . C . PASS END=37518043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr2 37518044 . A . PASS END=37518044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 37518045 . G C, 48.12 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=0.775;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:10,6,0:7,6,0:47:83,0,50,421,601,1029:255,0,255:17,0:4.8121e+01,8.8790e-05,5.3000e+01,4.2083e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,7,5,7:9,8,5,7 chr2 37518046 . A . PASS END=37518046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr2 37518047 . G . PASS END=37518082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:32:0,91,1258:0,91,255:40,0 chr2 37518083 . T . PASS END=37518121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,83,255:39,0 chr2 37518122 . A . PASS END=37518142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr2 37520276 . C . PASS END=37520414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,101,1389:0,101,255:40,0 chr2 37543380 . C . PASS END=37543628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:35:0,84,1260:0,89,255:40,0 chr2 37543629 . A . PASS END=37543641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:26:0,69,1035:0,78,255:26,0 chr2 37543642 . G . PASS END=37543657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:18:0,51,765:0,54,255:19,0 chr2 37543658 . T . PASS END=37543658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 37543659 . T . PASS END=37543667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr2 37571875 . A . PASS END=37571884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:23,0 chr2 37571885 . G . PASS END=37571885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 37571886 . A . PASS END=37571890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:25,0 chr2 37571891 . A . PASS END=37571891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 37571892 . C . PASS END=37571894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:25,0 chr2 37571895 . G . PASS END=37571895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr2 37571896 . C . PASS END=37571898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr2 37571899 . G . PASS END=37571902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 37571903 . T . PASS END=37571903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:27,0 chr2 37571904 . G . PASS END=37571909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 37571910 . C . PASS END=37571910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr2 37571911 . C . PASS END=37571917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 37571918 . T . PASS END=37571918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 37571919 . G . PASS END=37571922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 37571923 . C . PASS END=37571923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 37571924 . T . PASS END=37571929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1096:0,87,255:30,0 chr2 37571930 . T . PASS END=37571930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 37571931 . G . PASS END=37571973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:33,0 chr2 37571974 . T . PASS END=37571984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:26,0 chr2 37571985 . A . PASS END=37571994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:22:0,45,675:0,45,255:19,0 chr2 37579932 . A . PASS END=37580057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:36:0,81,1215:0,97,255:40,0 chr2 37580058 . G . PASS END=37580062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:26,0 chr2 37580063 . C . PASS END=37580070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 37580071 . C . PASS END=37580078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:24,0 chr2 37586723 . C . PASS END=37586724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 37586725 . C . PASS END=37586725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 37586726 . A . PASS END=37586733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr2 37586734 . G . PASS END=37586998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:28:0,81,1180:0,83,255:40,0 chr2 37586999 . A . PASS END=37587001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:25,0 chr2 37594375 . A . PASS END=37594377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr2 37594378 . G . PASS END=37594379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 37594380 . T . PASS END=37594380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 37594381 . T . PASS END=37594393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,966:0,84,255:30,0 chr2 37594394 . C . PASS END=37594394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr2 37594395 . A . PASS END=37594398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr2 37594399 . T . PASS END=37594399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 37594400 . T . PASS END=37594401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 37594402 . T . PASS END=37594402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1012:0,57,255:30,0 chr2 37594403 . C . PASS END=37594425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1193:0,86,255:35,0 chr2 37594426 . G . PASS END=37594426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:32,0 chr2 37594427 . G . PASS END=37594520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1395:0,107,255:40,0 chr2 37594521 . A . PASS END=37594521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:31,0 chr2 37594522 . G . PASS END=37594546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1156:0,83,255:35,0 chr2 37594547 . G . PASS END=37594551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1108:0,74,255:26,0 chr2 37595785 . A . PASS END=37595802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,108,1520:0,110,255:40,0 chr2 37596828 . G . PASS END=37596927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:49:0,120,1800:0,140,255:40,0 chr2 37599499 . A . PASS END=37599573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:67:0,120,1800:0,144,255:40,0 chr2 37599574 . G . PASS END=37599615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:70:0,120,1800:0,155,255:40,0 chr2 37599825 . G . PASS END=37599970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:52:0,120,1800:0,123,255:40,0 chr2 37872966 . T . PASS END=37872967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr2 37872968 . A . PASS END=37872981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,677:0,60,255:23,0 chr2 37872982 . A . PASS END=37872994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr2 37872995 . C . PASS END=37872995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr2 37872996 . C . PASS END=37872996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:27,0 chr2 37872997 . T . PASS END=37872999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:31,0 chr2 37873000 . T . PASS END=37873000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 37873001 . C . PASS END=37873003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 37873004 . A . PASS END=37873006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1028:0,77,255:31,0 chr2 37873007 . G . PASS END=37873009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1164:0,96,255:32,0 chr2 37873010 . A . PASS END=37873010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 37873011 . G . PASS END=37873169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1125:0,80,255:34,0 chr2 37873170 . G . PASS END=37873172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr2 37873173 . G . PASS END=37873198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 37873199 . C . PASS END=37873199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr2 37873200 . A . PASS END=37873208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr2 37873209 . G . PASS END=37873217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 37873218 . C . PASS END=37873222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 37873223 . T . PASS END=37873242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:25,0 chr2 37873243 . C . PASS END=37873247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 37873248 . C . PASS END=37873253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 37873254 . C . PASS END=37873254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:21,0 chr2 37873255 . A . PASS END=37873256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 37873257 . A . PASS END=37873257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 37873258 . C . PASS END=37873264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr2 37873265 . T . PASS END=37873265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:19,0 chr2 37873266 . C . PASS END=37873272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 37873273 . G . PASS END=37873273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 37873274 . C . PASS END=37873283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr2 37873284 . C . PASS END=37873284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 37873285 . A . PASS END=37873289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 37873290 . G . PASS END=37873290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr2 37873291 . G . PASS END=37873295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 37873296 . G . PASS END=37873297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:22:0,57,855:0,59,255:21,0 chr2 37873298 . A . PASS END=37873308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 37873309 . G . PASS END=37873309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr2 37873310 . G . PASS END=37873311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 37873312 . A . PASS END=37873322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr2 37873323 . C . PASS END=37873345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 37873346 . T . PASS END=37873347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 37873348 . A . PASS END=37873356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr2 37873357 . G . PASS END=37873362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 37873363 . A . PASS END=37873366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 37873367 . A . PASS END=37873373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,767:0,50,255:20,0 chr2 37873374 . C . PASS END=37873380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 37873381 . G . PASS END=37873381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 37873382 . C . PASS END=37873388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:22,0 chr2 37873389 . T . PASS END=37873417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,593:0,54,255:19,0 chr2 37873418 . T . PASS END=37873418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 37873419 . T . PASS END=37873434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,692:0,44,255:19,0 chr2 37873435 . G . PASS END=37873436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 37873437 . C . PASS END=37873453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:18,0 chr2 37873454 . A . PASS END=37873455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 37873456 . T . PASS END=37873456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 37873457 . C . PASS END=37873467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 37873468 . T . PASS END=37873468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 37873469 . T . PASS END=37873472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr2 37873473 . C . PASS END=37873476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 37873477 . A . PASS END=37873483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,885:0,64,255:26,0 chr2 37873484 . C . PASS END=37873487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 37873488 . A . PASS END=37873489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1025:0,73,255:29,0 chr2 37873490 . G . PASS END=37873724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1099:0,80,255:40,0 chr2 37873725 . T . PASS END=37873725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:32,0 chr2 37873726 . G . PASS END=37873726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1294:0,45,255:31,0 chr2 37873727 . G . PASS END=37873727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 37873728 . C . PASS END=37873728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1304:0,62,255:31,0 chr2 37873729 . A . PASS END=37873730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr2 38156421 . A . PASS END=38156435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,662:0,54,255:19,0 chr2 38156436 . A . PASS END=38156438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr2 38156439 . A . PASS END=38156443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 38156444 . G . PASS END=38156444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 38156445 . T . PASS END=38156445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:19,0 chr2 38156446 . T . PASS END=38156447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 38156448 . A . PASS END=38156448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 38156449 . T . PASS END=38156459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:24,0 chr2 38156460 . A . PASS END=38156460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr2 38156461 . T . PASS END=38156461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 38156462 . G . PASS END=38156463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 38156464 . T . PASS END=38156464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 38156465 . G . PASS END=38156468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr2 38156469 . A . PASS END=38156469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 38156470 . C . PASS END=38156501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1103:0,86,255:36,0 chr2 38156502 . C . PASS END=38156502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr2 38156503 . A . PASS END=38156870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:33:0,86,1123:0,86,255:40,0 chr2 38156871 . G . PASS END=38156871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1020:0,58,255:27,0 chr2 38156872 . G . PASS END=38156872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1053:0,85,255:29,0 chr2 38177655 . G . PASS END=38177684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,120,1800:0,128,255:40,0 chr2 38177722 . A . PASS END=38177738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,120,1800:0,202,255:40,0 chr2 38178376 . C . PASS END=38178399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1263:0,89,255:40,0 chr2 38178400 . C . PASS END=38179096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:96:41:0,96,1574:0,96,255:40,1 chr2 38179097 . G . PASS END=38179133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,144,255:40,0 chr2 38179134 . G A, 199.11 PASS DP=52;MQ=249.45;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,28,0:0,23,0:149:237,152,0,1865,152,1865:255,156,0:0,0:1.9911e+02,1.4911e+02,0.0000e+00,4.5000e+02,1.8388e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,32:0,0,26,25 chr2 38179135 . T . PASS END=38179171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,113,1566:0,113,255:40,0 chr2 38179172 . A . PASS END=38179335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,103,1360:0,103,255:40,0 chr2 38179336 . T . PASS END=38179372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,111,1665:0,120,255:40,0 chr2 38179373 . A G, 209.05 PASS DP=54;MQ=249.01;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,27,0:0,27,0:159:247,162,0,2024,162,2024:255,162,0:0,0:2.0905e+02,1.5905e+02,0.0000e+00,4.5000e+02,1.9382e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,30:0,0,31,23 chr2 38179374 . G . PASS END=38179410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,115,1800:0,115,255:40,0 chr2 38179411 . A . PASS END=38179435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:40:0,84,1260:0,104,255:40,0 chr2 38201183 . G . PASS END=38201357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:33:0,86,1217:0,86,255:40,0 chr2 38202355 . T . PASS END=38202457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,135,255:40,0 chr2 38208426 . G . PASS END=38208486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:67:0,120,1800:0,188,255:40,0 chr2 38216684 . G . PASS END=38216723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:74:0,120,1800:0,192,255:40,0 chr2 38216724 . T . PASS END=38216759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:84:0,120,1800:0,189,255:40,0 chr2 38218363 . G . PASS END=38218440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:57:0,120,1800:0,171,255:40,0 chr2 38224559 . G . PASS END=38224657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:64:0,120,1800:0,148,255:40,0 chr2 38231134 . G . PASS END=38231187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,158,255:40,0 chr2 38231279 . T . PASS END=38231359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,106,1721:0,106,255:40,0 chr2 38239746 . T . PASS END=38239748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:101:0,120,1800:0,255,255:40,0 chr2 38244329 . G . PASS END=38244382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:80:0,120,1800:0,220,255:40,0 chr2 38244721 . A . PASS END=38244739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:94:0,120,1800:0,255,255:40,0 chr2 38281883 . G . PASS END=38282012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:33:0,80,1260:0,80,255:40,0 chr2 38282013 . C . PASS END=38282020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr2 38294125 . G . PASS END=38294133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,204,255:40,0 chr2 38294779 . A . PASS END=38294779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 38294787 . C . PASS END=38294787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 38294801 . T . PASS END=38294801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr2 38294841 . A . PASS END=38294841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 38295105 . G . PASS END=38295105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 38295205 . A . PASS END=38295205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 38295268 . T . PASS END=38295268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 38295366 . A . PASS END=38295367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 38295516 . C . PASS END=38295516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,644:0,54,255:18,0 chr2 38295532 . C . PASS END=38295532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 38295550 . T . PASS END=38295550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 38295561 . T . PASS END=38295561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 38295576 . C . PASS END=38295576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 38295656 . T . PASS END=38295656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 38295658 . C . PASS END=38295658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 38295714 . A . PASS END=38295714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 38295904 . C . PASS END=38295904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 38295909 . T . PASS END=38295909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 38295927 . C . PASS END=38295927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 38295955 . T . PASS END=38295955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,202,255:40,0 chr2 38295957 . C . PASS END=38295957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr2 38295970 . G . PASS END=38295970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 38296067 . A . PASS END=38296067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:61:0,120,1800:0,149,255:40,0 chr2 38296084 . A . PASS END=38296084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 38296099 . C . PASS END=38296099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,120,1800:0,179,255:40,0 chr2 38296119 . A . PASS END=38296119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 38296135 . T . PASS END=38296135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 38296182 . T . PASS END=38296182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 38296254 . C . PASS END=38296254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:24,0 chr2 38296264 . G . PASS END=38296264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 38296304 . T . PASS END=38296304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 38296321 . C . PASS END=38296321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 38296374 . C . PASS END=38296374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 38296405 . T . PASS END=38296405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 38296415 . A . PASS END=38296415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 38296519 . T . PASS END=38296519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 38296596 . A . PASS END=38296596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 38296691 . T . PASS END=38296691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 38296724 . T . PASS END=38296724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 38296786 . G . PASS END=38296786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 38296790 . C . PASS END=38296790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr2 38296803 . C . PASS END=38296803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 38296809 . C . PASS END=38296809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 38296837 . T . PASS END=38296837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 38296860 . G . PASS END=38296860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 38296884 . A . PASS END=38296885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 38296893 . A . PASS END=38296893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 38296920 . G . PASS END=38296920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 38296948 . C . PASS END=38296948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 38296985 . C . LowGQ END=38296985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:0:48:0,0,1374:28,0,255:40,5 chr2 38296997 . A . PASS END=38296997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 38297001 . A . PASS END=38297001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 38297177 . A . PASS END=38297177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 38297204 . A . PASS END=38297204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,220,255:40,0 chr2 38297372 . C . PASS END=38297372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 38297399 . C . PASS END=38297399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 38297485 . C . PASS END=38297485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 38297632 . T . PASS END=38297632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:47:0,90,1350:0,141,255:30,0 chr2 38297747 . G . PASS END=38297747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 38297750 . C . PASS END=38297750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 38297760 . G . PASS END=38297760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 38297822 . G . PASS END=38297822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr2 38297865 . T . PASS END=38298099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,120,1800:0,122,255:40,0 chr2 38298100 . C . PASS END=38298138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,117,1755:0,122,255:40,0 chr2 38298139 . T C, 49.97 PASS DP=46;MQ=248.65;MQRankSum=4.739;ReadPosRankSum=3.419;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,22,0:0.478,0.000:46:10,13,0:14,9,0:47:85,0,47,185,185,185:255,0,255:20,0:4.9968e+01,8.7237e-05,5.0000e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,14,8,14:10,14,9,13 chr2 38298140 . T . PASS END=38298149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,102,1530:0,135,255:40,0 chr2 38298150 . A G, 49.97 PASS DP=46;MQ=248.65;MQRankSum=4.827;ReadPosRankSum=2.100;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,24,0:0.522,0.000:46:9,14,0:13,10,0:47:85,0,47,185,185,185:255,0,255:17,0:4.9968e+01,8.7237e-05,5.0000e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,11,9,15:8,14,9,15 chr2 38298151 . T . PASS END=38298202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1342:0,100,255:40,0 chr2 38298203 . C G, 49.98 PASS DP=47;MQ=249.36;MQRankSum=5.352;ReadPosRankSum=0.990;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,23,0:0.489,0.000:47:10,9,0:14,14,0:47:85,0,47,185,185,185:255,0,255:21,0:4.9981e+01,8.6978e-05,5.0000e+01,1.8475e+02,2.1952e+02,1.8776e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,12,13,10:10,14,5,18 chr2 38298204 . T . PASS END=38298240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,107,1422:0,107,255:40,0 chr2 38298241 . A . PASS END=38298356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,113,1545:0,113,255:40,0 chr2 38298357 . A . PASS END=38298393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,118,1800:0,118,255:40,0 chr2 38298394 . C T, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.750;ReadPosRankSum=4.243;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,26,0:0.565,0.000:46:9,9,0:11,17,0:48:85,0,49,930,715,1645:255,0,255:17,0:5.0000e+01,7.4034e-05,5.1514e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,10,16:11,9,15,11 chr2 38298395 . G . PASS END=38298431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1350:0,105,255:40,0 chr2 38298432 . T . PASS END=38298435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:28,0 chr2 38298436 . G . PASS END=38298453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr2 38298456 . G . PASS END=38298456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 38301483 . C . PASS END=38301483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 38301489 . C . PASS END=38301505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 38301506 . C . PASS END=38301506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 38301507 . A . PASS END=38301511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 38301512 . C . PASS END=38301532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:13,0 chr2 38301533 . G . PASS END=38301533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 38301534 . T . PASS END=38301534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 38301535 . C . PASS END=38301543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 38301544 . C . PASS END=38301552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 38301553 . T . PASS END=38301554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 38301555 . T . PASS END=38301555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 38301556 . C . PASS END=38301557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 38301558 . G . PASS END=38301558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 38301559 . T . PASS END=38301601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr2 38301602 . A . PASS END=38301602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 38301603 . C . PASS END=38301646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:19,0 chr2 38301647 . G . PASS END=38301648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 38301649 . C . LowGQ END=38301649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,419:7,0,255:16,0 chr2 38301650 . G . PASS END=38301651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 38301652 . C . PASS END=38301673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 38301674 . C . PASS END=38301674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 38301675 . C . PASS END=38301713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,517:0,40,255:19,0 chr2 38301714 . A . PASS END=38301714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:13,0 chr2 38301715 . G . PASS END=38301735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 38301736 . G . PASS END=38301736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr2 38301737 . G . PASS END=38301745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 38301746 . C . PASS END=38301746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 38301747 . T . PASS END=38301755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 38301756 . C . PASS END=38301756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:14,0 chr2 38301757 . G . PASS END=38301761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 38301762 . A . PASS END=38301762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 38301763 . C . PASS END=38301765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 38301766 . T . PASS END=38301773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 38301774 . G . PASS END=38301774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 38301775 . G . PASS END=38301775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,474:0,14,255:11,0 chr2 38301776 . G . PASS END=38301776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 38301777 . T . PASS END=38301847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 38301848 . G . PASS END=38301872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 38301873 . T . PASS END=38301873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 38301874 . C . PASS END=38301877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 38301878 . G . PASS END=38301879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 38301880 . C . PASS END=38301883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 38301884 . G . PASS END=38301887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 38301888 . C . PASS END=38301891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 38301892 . A . PASS END=38301892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 38301893 . G . PASS END=38301912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 38301913 . C . PASS END=38301926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr2 38301927 . G . PASS END=38301938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 38301939 . A . PASS END=38301975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr2 38301976 . C . LowGQ END=38301976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr2 38301977 . G . PASS END=38301985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 38301986 . C . PASS END=38301995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 38301996 . G . PASS END=38302058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr2 38302059 . C . PASS END=38302080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr2 38302081 . T . PASS END=38302081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 38302082 . G . PASS END=38302110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr2 38302111 . A . PASS END=38302111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 38302112 . G . PASS END=38302118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 38302119 . G . PASS END=38302142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr2 38302143 . C . PASS END=38302143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 38302144 . G . PASS END=38302154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 38302155 . A . PASS END=38302155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 38302156 . C . PASS END=38302196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,829:0,66,255:23,0 chr2 38302197 . G . PASS END=38302197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 38302198 . A . PASS END=38302236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,869:0,66,255:24,0 chr2 38302237 . C . PASS END=38302238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 38302239 . T . PASS END=38302245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 38302246 . C . PASS END=38302248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 38302249 . C . PASS END=38302256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:21,0 chr2 38302257 . C . PASS END=38302259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,831:0,58,255:19,0 chr2 38302260 . C . PASS END=38302260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 38302261 . T . PASS END=38302261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr2 38302262 . G . PASS END=38302268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 38302269 . C . PASS END=38302286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,690:0,46,255:19,0 chr2 38302287 . C . PASS END=38302300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr2 38302301 . C . PASS END=38302301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 38302302 . A . PASS END=38302302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 38302303 . G . PASS END=38302303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 38302304 . G . PASS END=38302308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 38302309 . C . PASS END=38302310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 38302311 . A . PASS END=38302312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 38302313 . C . PASS END=38302313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 38302314 . G . PASS END=38302320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 38302321 . G . PASS END=38302321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 38302322 . A . PASS END=38302329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,909:0,75,255:26,0 chr2 38302330 . G . PASS END=38302330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:24,0 chr2 38302331 . G . PASS END=38302335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 38302336 . C . PASS END=38302336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 38302337 . C . PASS END=38302338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 38302339 . C . PASS END=38302356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:26,0 chr2 38302357 . G . PASS END=38302359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 38302360 . G . PASS END=38302360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 38302361 . C . PASS END=38302375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,896:0,84,255:29,0 chr2 38302376 . C . PASS END=38302376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 38302377 . G . PASS END=38302377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 38302378 . G . PASS END=38302401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,71,255:26,0 chr2 38302402 . T . PASS END=38302412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr2 38302413 . A . PASS END=38302413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:27,0 chr2 38302414 . G . PASS END=38302418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 38302419 . C . PASS END=38302419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 38302420 . G . PASS END=38302420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 38302421 . C . PASS END=38302529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:22:0,61,837:0,61,255:26,0 chr2 38302530 . A . PASS END=38302531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 38302542 . G . PASS END=38302542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 38302922 . C . PASS END=38302923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr2 38303001 . G . PASS END=38303001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:18:25:0,18,270:0,75,255:6,0 chr2 38303005 . A . PASS END=38303005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:3:26:0,3,45:0,78,255:1,0 chr2 38303117 . G . PASS END=38303117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 38303205 . G . PASS END=38303205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 38303280 . C . PASS END=38303280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 38523136 . T . PASS END=38523255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:44:0,87,1305:0,99,255:40,0 chr2 38523625 . C . PASS END=38523732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:92:35:0,92,1291:0,92,255:40,0 chr2 38523828 . C . PASS END=38523842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:67:0,120,1800:0,168,255:40,0 chr2 38525286 . C . PASS END=38525710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:43:0,87,1305:0,94,255:40,0 chr2 38525711 . C . PASS END=38525717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:64:37:0,64,1035:0,64,255:24,0 chr2 38526398 . C . PASS END=38526469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,114,1656:0,114,255:40,0 chr2 38527414 . C . PASS END=38527470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,195,255:40,0 chr2 38536521 . C . PASS END=38536588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:82:39:0,82,1130:0,82,255:40,0 chr2 38536589 . C . PASS END=38536625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,188,255:40,0 chr2 38536626 . T G, 50.00 PASS DP=68;MQ=250.00;MQRankSum=7.034;ReadPosRankSum=4.292;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,38,0:0.559,0.000:68:17,17,0:13,21,0:48:85,0,49,1351,1039,2390:255,0,255:25,0:5.0000e+01,7.2481e-05,5.1732e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,12,26:13,17,23,15 chr2 38536627 . C . PASS END=38536648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,160,255:40,0 chr2 38537451 . C . PASS END=38537588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:90:38:0,90,1270:0,90,255:40,0 chr2 38537589 . C . PASS END=38537589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 38540293 . C . PASS END=38540385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:47:0,111,1665:0,111,255:40,0 chr2 38541750 . C . PASS END=38541806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:78:0,120,1800:0,234,255:40,0 chr2 38542426 . T . PASS END=38542476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,1:112:99:106:0,120,1800:0,250,255:40,0 chr2 38545677 . C . PASS END=38545781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:37:0,92,1358:0,92,255:40,0 chr2 38546027 . T . PASS END=38546161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:47:0,120,1800:0,125,255:40,0 chr2 38570410 . C . PASS END=38570410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:20,0 chr2 38570411 . T . PASS END=38570412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,913:0,62,255:23,0 chr2 38570413 . G . PASS END=38570413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr2 38570414 . T . PASS END=38570414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 38570415 . T . PASS END=38570415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr2 38570416 . A . PASS END=38570654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:30:0,80,1108:0,80,255:40,0 chr2 38603258 . C . PASS END=38603321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:81:0,120,1800:0,219,255:40,0 chr2 38604285 . C . PASS END=38604307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr2 38604308 . T . PASS END=38604310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr2 38604311 . T . PASS END=38604311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 38604312 . T . PASS END=38604313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1070:0,90,255:30,0 chr2 38604314 . A . PASS END=38604320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1094:0,90,255:31,0 chr2 38604321 . C . PASS END=38604321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 38604322 . G . PASS END=38604322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr2 38604323 . C . PASS END=38604323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 38604324 . T . PASS END=38604337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:30,0 chr2 38604338 . C . PASS END=38604338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 38604339 . G . PASS END=38604345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr2 38604346 . G . PASS END=38604346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 38604347 . C . PASS END=38604348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 38604349 . C . PASS END=38604349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr2 38604350 . C . PASS END=38604350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 38604351 . A G, 49.71 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=3.970;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:7,6,0:9,8,0:48:84,0,50,501,564,1065:255,0,255:16,0:4.9711e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,9,5:9,7,9,5 chr2 38604352 . C . PASS END=38604360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 38604361 . G . PASS END=38604361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 38604362 . T . PASS END=38604362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 38604363 . G . PASS END=38604383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:26,0 chr2 38604384 . C . PASS END=38604384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:20,0 chr2 38604385 . C . PASS END=38604388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 38604389 . T . PASS END=38604394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 38604395 . T . PASS END=38604395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 38604396 . C . PASS END=38604397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 38604398 . G . PASS END=38604399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 38604400 . C . PASS END=38604400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:18,0 chr2 38604401 . A . PASS END=38604402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:18,0 chr2 38605164 . C . PASS END=38605265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:28:0,80,1052:0,80,255:40,0 chr2 38605266 . T . PASS END=38605266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:25,0 chr2 38791259 . T . PASS END=38791379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:61:0,120,1800:0,183,255:40,0 chr2 38791996 . C . PASS END=38792095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,136,255:40,0 chr2 38792096 . A . PASS END=38792135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:46:0,90,1350:0,100,255:40,0 chr2 38795333 . T . PASS END=38795335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 38795336 . C . PASS END=38795439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:27:0,81,1002:0,81,255:40,0 chr2 38795528 . G . PASS END=38795585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,102,1530:0,147,255:40,0 chr2 38796275 . C . PASS END=38796296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 38796297 . A . PASS END=38796297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:30,0 chr2 38796298 . C . PASS END=38796476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:32:0,90,1233:0,96,255:40,0 chr2 38796946 . C . PASS END=38797067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,120,1800:0,130,255:40,1 chr2 38800352 . C . PASS END=38800371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,123,255:40,0 chr2 38800372 . A . PASS END=38800569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:35:0,87,1227:0,91,255:40,0 chr2 38804603 . C . PASS END=38804674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,169,255:40,0 chr2 38805098 . T . PASS END=38805131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1311:0,95,255:38,0 chr2 38805132 . A . PASS END=38805132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr2 38805133 . G . PASS END=38805144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1250:0,92,255:34,0 chr2 38809014 . T . PASS END=38809127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:57:0,120,1800:0,144,255:40,0 chr2 38809214 . C . PASS END=38809315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:72:0,120,1800:0,166,255:40,0 chr2 38810983 . T . PASS END=38811068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:43:0,117,1755:0,129,255:40,0 chr2 38812786 . C . PASS END=38812793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1023:0,81,255:35,0 chr2 38812794 . T . PASS END=38812794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:34,0 chr2 38812795 . T . PASS END=38812808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1304:0,105,255:38,0 chr2 38812809 . T . PASS END=38812809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr2 38812810 . C . PASS END=38812970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:36:0,94,1230:0,94,255:40,0 chr2 38812971 . T . PASS END=38812971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:30,0 chr2 38812972 . G . PASS END=38812979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1210:0,96,255:32,0 chr2 38812980 . A . PASS END=38812991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:30:0,78,1058:0,79,255:30,0 chr2 38812992 . C . PASS END=38812996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1092:0,87,255:29,0 chr2 38812997 . C . PASS END=38812997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 38812998 . G . PASS END=38813001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 38813002 . A . PASS END=38813002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 38813003 . A . PASS END=38813004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 38813005 . T . PASS END=38813005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 38813006 . G . PASS END=38813009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 38813010 . T . PASS END=38813021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:25,0 chr2 38813022 . A . PASS END=38813023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 38818672 . C . PASS END=38818790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,120,1800:0,144,255:40,0 chr2 38827040 . C . PASS END=38827045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 38829580 . C . PASS END=38829587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 38829588 . A . PASS END=38829612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr2 38829613 . A . PASS END=38829613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 38829614 . T . PASS END=38829622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr2 38829623 . C . PASS END=38829649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr2 38829650 . T . PASS END=38829650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr2 38829651 . C . PASS END=38829679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr2 38829680 . C . PASS END=38829680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 38829681 . C . PASS END=38829691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr2 38829692 . T . PASS END=38829692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr2 38829693 . T . PASS END=38829704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:16,0 chr2 38829705 . C . PASS END=38829705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr2 38829706 . C . PASS END=38829715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr2 38829716 . T . PASS END=38829738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 38829739 . C . PASS END=38829756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 38829757 . G . PASS END=38829767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:10:7:0,10,249:0,10,249:6,0 chr2 38829768 . T . PASS END=38829768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 38829999 . C . PASS END=38830005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 38830006 . A . PASS END=38830006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,829:0,36,255:19,0 chr2 38830007 . C . PASS END=38830009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,886:0,64,255:22,0 chr2 38893304 . A . PASS END=38893326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:26,0 chr2 38893327 . G . PASS END=38893363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:37,0 chr2 38893364 . A . PASS END=38893364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:34,0 chr2 38893365 . A . PASS END=38893454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,95,255:40,0 chr2 38893455 . G . PASS END=38893473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:25,0 chr2 38893474 . T . PASS END=38893493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:18:0,43,636:0,43,255:19,0 chr2 38903054 . G . PASS END=38903067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr2 38903068 . C . PASS END=38903085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,816:0,69,255:25,0 chr2 38903086 . G . PASS END=38903089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr2 38903090 . T . PASS END=38903090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 38903091 . T . PASS END=38903095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr2 38903096 . G . PASS END=38903096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr2 38903097 . G . PASS END=38903125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 38903126 . T . PASS END=38903126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 38903127 . C . PASS END=38903128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 38903129 . A . PASS END=38903129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,889:0,70,255:28,0 chr2 38903130 . G . PASS END=38903137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 38903138 . G . PASS END=38903165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,886:0,61,255:26,0 chr2 38903166 . G . PASS END=38903182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:17:0,42,630:0,51,255:17,0 chr2 38903183 . A . PASS END=38903183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 38903184 . T . PASS END=38903184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 38903185 . G . PASS END=38903193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:14:0,34,574:0,34,255:13,0 chr2 38903194 . A . PASS END=38903194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:12,0 chr2 38903195 . G . PASS END=38903195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 38903196 . A . PASS END=38903203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,432:0,45,255:15,0 chr2 38903204 . A . PASS END=38903204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 38903205 . T . PASS END=38903207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 38903208 . A . PASS END=38903208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 38908422 . G . PASS END=38908433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr2 38908434 . C . PASS END=38908434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 38908435 . C . PASS END=38908435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 38908436 . T . PASS END=38908437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 38908438 . G . PASS END=38908438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 38908439 . G . PASS END=38908440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 38908441 . T . PASS END=38908441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 38908442 . G . PASS END=38908478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1131:0,90,255:35,0 chr2 38908479 . G . PASS END=38908479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 38908480 . A . PASS END=38908488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1332:0,92,255:34,0 chr2 38908489 . A . PASS END=38908489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:33,0 chr2 38908490 . A . PASS END=38908492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 38908493 . C . PASS END=38908493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 38908494 . T . PASS END=38908507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1215:0,86,255:35,0 chr2 38908508 . A . PASS END=38908508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 38908509 . A . PASS END=38908573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1147:0,80,255:35,0 chr2 38908574 . T . PASS END=38908613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,886:0,66,255:24,0 chr2 38908614 . A . PASS END=38908628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,660:0,43,255:19,0 chr2 38916955 . G . PASS END=38917001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1011:0,81,255:38,0 chr2 38917002 . T . PASS END=38917002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:37,0 chr2 38917003 . T . PASS END=38917036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1218:0,86,255:38,0 chr2 38925508 . G . PASS END=38925537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1202:0,86,255:32,0 chr2 38925538 . G . PASS END=38925539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 38956698 . G . PASS END=38956711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,772:0,69,255:25,0 chr2 38956712 . G . PASS END=38956777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1027:0,87,255:40,0 chr2 38956778 . C . PASS END=38956778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr2 38956779 . T . PASS END=38956810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:35,0 chr2 38956811 . G . PASS END=38956811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr2 38956812 . G . PASS END=38956822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr2 38956823 . A . PASS END=38956828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,984:0,70,255:25,0 chr2 38956829 . T . PASS END=38956829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,886:0,51,255:22,0 chr2 38956830 . T . PASS END=38956833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:25,0 chr2 38956834 . T . PASS END=38956835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 38956836 . C . PASS END=38956839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:24,0 chr2 38958877 . G . PASS END=38958877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 38958878 . G . PASS END=38958878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 38958879 . T . PASS END=38958879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 38958880 . G . PASS END=38958880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 38958881 . C . PASS END=38958881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr2 38958882 . A . PASS END=38958891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 38958892 . A . PASS END=38958892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 38958893 . A . PASS END=38958893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 38958894 . G . PASS END=38958900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 38958901 . G . PASS END=38958903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 38958904 . A . PASS END=38958904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 38958905 . C . PASS END=38959029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1116:0,87,255:40,0 chr2 38959030 . C . PASS END=38959047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,923:0,71,255:26,0 chr2 38959048 . T . PASS END=38959051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 38960630 . C . PASS END=38960666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1297:0,92,255:36,0 chr2 38960667 . A . PASS END=38960667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr2 38960668 . G . PASS END=38960696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:32:0,85,1150:0,85,255:35,0 chr2 38960697 . C . PASS END=38960697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:29,0 chr2 38960698 . T . PASS END=38960707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:30,0 chr2 38968247 . T . PASS END=38968312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:97:36:0,97,1313:0,97,255:40,0 chr2 38972275 . T . PASS END=38972329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,133,255:40,0 chr2 38973286 . C . PASS END=38973321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:82:0,120,1800:0,230,255:40,0 chr2 38973836 . C . PASS END=38973889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,220,255:40,0 chr2 38974209 . T . PASS END=38974220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:31,0 chr2 38974221 . T . PASS END=38974221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 38974222 . C . PASS END=38974251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1157:0,87,255:33,0 chr2 38974252 . C . PASS END=38974264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:24,0 chr2 38974265 . T . PASS END=38974265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:21,0 chr2 38974266 . C . PASS END=38974268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 38974269 . G . PASS END=38974272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr2 38975189 . T . PASS END=38975287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,136,255:40,0 chr2 38975288 . G . PASS END=38975299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:86:47:0,86,1395:0,86,255:36,0 chr2 38975721 . C . PASS END=38975795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:38:0,98,1402:0,98,255:40,0 chr2 38976040 . C . PASS END=38976074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,179,255:40,0 chr2 38976294 . T . PASS END=38976296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 38976297 . C . PASS END=38976297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 38976298 . C . PASS END=38976298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr2 38976299 . G . PASS END=38976300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 38976301 . C . PASS END=38976301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr2 38976302 . T . PASS END=38976315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,515:0,48,255:16,0 chr2 38976461 . T . PASS END=38976467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:21,0 chr2 38976468 . G . PASS END=38976488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:17:0,45,675:0,47,255:18,0 chr2 38976658 . T . PASS END=38976664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1016:0,71,255:25,0 chr2 38976665 . A . PASS END=38976665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 38976666 . A . PASS END=38976666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 38976667 . A . PASS END=38976801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,964:0,84,255:39,0 chr2 38976802 . C . PASS END=38976802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 38976803 . A . PASS END=38976813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 38976814 . T . PASS END=38976837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr2 38976838 . A . PASS END=38976838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:20,0 chr2 38976839 . C . PASS END=38976843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 38976844 . C . PASS END=38976847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr2 38977156 . T . PASS END=38977324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:36:0,93,1395:0,97,255:40,0 chr2 38977325 . A . PASS END=38977325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:29,0 chr2 38977326 . C . PASS END=38977327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,89,255:27,0 chr2 38977328 . C . PASS END=38977333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:32:0,66,1170:0,66,255:26,0 chr2 38977334 . T . PASS END=38977335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 38977336 . T . PASS END=38977336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:26,0 chr2 38978371 . C . PASS END=38978397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1101:0,86,255:30,0 chr2 38978398 . T . PASS END=38978398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 39006133 . A . PASS END=39006139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:31,0 chr2 39006140 . A . PASS END=39006140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 39006141 . A . PASS END=39006260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:31:0,86,1225:0,86,255:40,0 chr2 39008659 . T . PASS END=39008660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 39008661 . T . PASS END=39008665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 39008666 . C . PASS END=39008675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr2 39008676 . T . PASS END=39008701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr2 39008702 . A . PASS END=39008702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,604:0,30,255:22,0 chr2 39008703 . C . PASS END=39008708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,845:0,69,255:23,0 chr2 39008709 . T . PASS END=39008709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 39008710 . T . PASS END=39008713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 39008714 . G . PASS END=39008715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,839:0,36,255:23,0 chr2 39008716 . A . PASS END=39008716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 39008717 . C . PASS END=39008717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr2 39008718 . A . PASS END=39008726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:26,0 chr2 39008727 . A . PASS END=39008727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39008728 . G . PASS END=39008737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 39008738 . A . PASS END=39008738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr2 39008739 . C . PASS END=39008740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:25,0 chr2 39008741 . A . PASS END=39008741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr2 39008742 . T . PASS END=39008747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,893:0,62,255:27,0 chr2 39008748 . A . PASS END=39008751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,995:0,84,255:30,0 chr2 39008752 . G . PASS END=39008752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 39008753 . G . PASS END=39008755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1197:0,96,255:33,0 chr2 39008756 . C . PASS END=39008756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1033:0,44,255:31,0 chr2 39008757 . A . PASS END=39008769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1219:0,89,255:36,0 chr2 39008770 . G . PASS END=39008770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1188:0,53,255:34,0 chr2 39008771 . A . PASS END=39008775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1071:0,91,255:36,0 chr2 39008776 . G . PASS END=39008776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:34,0 chr2 39008777 . A . PASS END=39008778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1213:0,91,255:36,0 chr2 39008779 . G . PASS END=39008779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1133:0,58,255:33,0 chr2 39008780 . C . PASS END=39008782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1321:0,111,255:37,0 chr2 39008783 . T . PASS END=39008783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:35,0 chr2 39008784 . T . PASS END=39009034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:35:0,80,1252:0,80,255:40,0 chr2 39025441 . T . PASS END=39025517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:32:0,80,1127:0,80,255:40,0 chr2 39025518 . G . PASS END=39025554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,194,255:40,0 chr2 39025555 . G A, 45.54 PASS DP=73;MQ=250.00;MQRankSum=7.110;ReadPosRankSum=2.559;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,28,0:0.389,0.000:72:24,14,0:20,14,0:45:80,0,50,973,1574,2547:255,0,255:40,0:4.5542e+01,1.4289e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,21,17,11:23,21,11,17 chr2 39025556 . C . PASS END=39025596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,210,255:40,0 chr2 39029857 . C . PASS END=39030036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:33:0,82,1199:0,82,255:40,0 chr2 39030037 . G . PASS END=39030046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:32,0 chr2 39030047 . A . PASS END=39030057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,76,255:26,0 chr2 39033701 . C . PASS END=39033835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:43:0,99,1485:0,119,255:40,0 chr2 39040963 . C . PASS END=39041037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,137,255:40,0 chr2 39042663 . C . PASS END=39042676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:25,0 chr2 39042677 . C . PASS END=39042677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 39042678 . A . PASS END=39042684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 39042685 . A . PASS END=39042686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,918:0,73,255:28,0 chr2 39042687 . A . PASS END=39042688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,872:0,43,255:27,0 chr2 39042689 . C . PASS END=39042690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:27:31:0,27,876:0,27,255:27,0 chr2 39042691 . T . PASS END=39042691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 39042692 . C . PASS END=39042692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,925:0,29,255:27,0 chr2 39042693 . T . PASS END=39042693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 39042694 . C . PASS END=39042694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:30,0 chr2 39042695 . C . PASS END=39042695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,939:0,43,255:28,0 chr2 39042696 . T . PASS END=39042699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1127:0,83,255:34,0 chr2 39042700 . T . PASS END=39042700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1117:0,55,255:32,0 chr2 39042701 . G . PASS END=39042749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1186:0,86,255:37,0 chr2 39042750 . T . PASS END=39042750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1288:0,62,255:28,0 chr2 39042751 . A . PASS END=39042757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:33:0,82,1149:0,82,255:30,0 chr2 39042758 . A . PASS END=39042758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:28,0 chr2 39042759 . T . PASS END=39042769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 39042770 . T . PASS END=39042770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:26,0 chr2 39042771 . G . PASS END=39042774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 39042775 . T . PASS END=39042797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr2 39043316 . T . PASS END=39043327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,2:118:99:116:0,120,1800:0,255,255:40,0 chr2 39046019 . C . PASS END=39046102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:35:0,90,1268:0,90,255:40,0 chr2 39046191 . C . PASS END=39046271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:47:0,109,1667:0,109,255:40,0 chr2 39046272 . A . PASS END=39046286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,101,1616:0,101,255:40,0 chr2 39050135 . A . PASS END=39050135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 39050136 . A . PASS END=39050136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 39050137 . A . PASS END=39050137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:28,0 chr2 39050138 . C . PASS END=39050139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 39050140 . G . PASS END=39050140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:28,0 chr2 39050141 . A C, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.416;ReadPosRankSum=1.416;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,21,0:0.677,0.000:31:3,12,0:7,9,0:43:85,0,41,751,358,1109:255,0,255:9,0:5.0000e+01,2.0347e-04,4.4336e+01,4.5000e+02,3.9234e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,1,9,12:2,8,12,9 chr2 39050142 . G . PASS END=39050148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr2 39050149 . A . PASS END=39050149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr2 39050150 . A . PASS END=39050156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr2 39050157 . C . PASS END=39050157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 39050158 . T . PASS END=39050178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:31:0,86,1186:0,86,255:40,0 chr2 39050179 . G . PASS END=39050350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:37:0,87,1305:0,95,255:40,0 chr2 39050351 . A . PASS END=39050351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:31,0 chr2 39050352 . A . PASS END=39050362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr2 39050363 . G . PASS END=39050373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr2 39050374 . G . PASS END=39050374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 39050375 . G . PASS END=39050382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:20,0 chr2 39050383 . G . PASS END=39050401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:18,0 chr2 39050402 . A . PASS END=39050402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 39050403 . A . PASS END=39050404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 39050405 . T . PASS END=39050405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 39050406 . T . PASS END=39050406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 39050407 . T . PASS END=39050407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr2 39050408 . A . PASS END=39050411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 39052989 . C . PASS END=39052991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 39052992 . A . PASS END=39053140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1143:0,84,255:40,0 chr2 39053141 . A . PASS END=39053142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 39053143 . A . PASS END=39053144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:27,0 chr2 39053145 . A . PASS END=39053161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr2 39053162 . A . PASS END=39053166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 39053167 . C . PASS END=39053168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 39053169 . A . PASS END=39053189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:19:0,42,630:0,44,255:19,0 chr2 39053658 . C . PASS END=39053824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:34:0,84,1350:0,84,255:40,0 chr2 39053825 . A . PASS END=39053825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:30,0 chr2 39053826 . A . PASS END=39053830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1249:0,89,255:32,0 chr2 39053831 . T . PASS END=39053831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1142:0,61,255:29,0 chr2 39055482 . C . PASS END=39055578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:71:0,120,1800:0,174,255:40,0 chr2 39064973 . C . PASS END=39065089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,101,1396:0,101,255:40,0 chr2 39070147 . C . PASS END=39070352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:37:0,87,1305:0,93,255:40,0 chr2 39074161 . C . PASS END=39074215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,199,255:40,2 chr2 39075411 . C . PASS END=39075544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:29:0,82,1057:0,82,255:40,0 chr2 39081196 . C . PASS END=39081257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1178:0,86,255:40,0 chr2 39081258 . A . PASS END=39081258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1518:0,75,255:40,0 chr2 39081259 . T . PASS END=39081293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:40:0,87,1305:0,120,255:40,0 chr2 39081294 . G . PASS END=39081300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:39:0,60,900:0,100,255:21,0 chr2 39081301 . A . PASS END=39081320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,51,255:19,0 chr2 39082199 . C . PASS END=39082200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 39082201 . T . PASS END=39082201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 39082202 . G . PASS END=39082220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:18,0 chr2 39082221 . T . PASS END=39082221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 39082222 . G . PASS END=39082231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,653:0,41,255:19,0 chr2 39082232 . G . PASS END=39082251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,817:0,63,255:25,0 chr2 39082252 . C . PASS END=39082253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 39082254 . C . PASS END=39082255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 39082256 . T . PASS END=39082281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:35,0 chr2 39082282 . A . PASS END=39082282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr2 39082283 . G . PASS END=39082306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:36:0,80,1191:0,80,255:39,0 chr2 39082307 . G . PASS END=39082343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,108,1501:0,110,255:40,0 chr2 39082344 . T C, 49.70 PASS DP=40;MQ=249.24;MQRankSum=4.306;ReadPosRankSum=0.921;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:14,13,0:7,6,0:48:84,0,50,621,751,1372:255,0,255:21,0:4.9697e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,8,11:11,10,8,11 chr2 39082345 . T . PASS END=39082350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1410:0,101,255:37,0 chr2 39082351 . A . PASS END=39082351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1150:0,67,255:32,0 chr2 39082352 . A . PASS END=39082365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1247:0,89,255:35,0 chr2 39082366 . A . PASS END=39082366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1020:0,49,255:30,0 chr2 39082367 . C . PASS END=39082381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr2 39082382 . G . PASS END=39082382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:29,0 chr2 39082383 . G . PASS END=39082388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:30,0 chr2 39082389 . C . PASS END=39082394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,990:0,60,255:26,0 chr2 39082402 . T . PASS END=39082409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr2 39083482 . C . PASS END=39083587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:98:45:0,98,1800:0,98,255:40,0 chr2 39083588 . G . PASS END=39083598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:47:0,81,1215:0,125,255:40,0 chr2 39083599 . G . PASS END=39083603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:78:36:0,78,1170:0,108,255:26,0 chr2 39085803 . C . PASS END=39085975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:30:0,84,1260:0,90,255:40,0 chr2 39085976 . C . PASS END=39085976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 39085977 . A . PASS END=39085978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 39088141 . C . PASS END=39088163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1184:0,102,255:35,0 chr2 39088164 . A . PASS END=39088164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:35,0 chr2 39088165 . A . PASS END=39088174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1244:0,81,255:38,0 chr2 39088175 . T . PASS END=39088175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,0 chr2 39088176 . G . PASS END=39088367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1246:0,81,255:40,1 chr2 39088368 . T . PASS END=39088368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1127:0,75,255:32,0 chr2 39088369 . C . PASS END=39088388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1258:0,89,255:34,0 chr2 39088389 . T . PASS END=39088389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:32,0 chr2 39088390 . G . PASS END=39088393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 39088394 . A . PASS END=39088394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,914:0,55,255:29,0 chr2 39088395 . C . PASS END=39088422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1149:0,82,255:35,0 chr2 39088423 . T . PASS END=39088423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:34,0 chr2 39088424 . G . PASS END=39088957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:32:0,80,1139:0,80,255:40,0 chr2 39088958 . G . PASS END=39088959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 39088960 . G . PASS END=39088963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 39088964 . A . PASS END=39088979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,71,255:26,0 chr2 39089287 . C . PASS END=39089293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 39089294 . G . PASS END=39089296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 39089297 . T . PASS END=39089297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 39089298 . T . PASS END=39089298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 39089299 . T . PASS END=39089302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 39089303 . C . PASS END=39089308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 39089309 . A . PASS END=39089309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:26,0 chr2 39089310 . T . PASS END=39089323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:32,0 chr2 39089324 . A . PASS END=39089324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,989:0,79,255:30,0 chr2 39089325 . T . PASS END=39089411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:32:0,90,1350:0,96,255:40,0 chr2 39089412 . C . PASS END=39089414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:41:0,75,1125:0,123,255:26,0 chr2 39089415 . G . PASS END=39089434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1133:0,90,255:30,0 chr2 39089435 . A . PASS END=39089443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,807:0,67,255:26,0 chr2 39089444 . C . PASS END=39089444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,770:0,34,255:23,0 chr2 39089445 . A . PASS END=39089457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 39089458 . T . PASS END=39089458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:22,0 chr2 39089459 . C . PASS END=39089475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,884:0,61,255:22,0 chr2 39090503 . T . PASS END=39090658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:38:0,87,1305:0,98,255:40,0 chr2 39090659 . G . PASS END=39090661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:44:0,87,1305:0,132,255:30,0 chr2 39095324 . C . PASS END=39095327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr2 39095328 . A . PASS END=39095329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr2 39095330 . G . PASS END=39095334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:12,0 chr2 39095335 . C . PASS END=39095375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:14:0,40,460:0,40,255:19,0 chr2 39095376 . A . PASS END=39095379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,664:0,60,255:22,0 chr2 39095380 . T . PASS END=39095380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr2 39095381 . C . PASS END=39095384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr2 39095385 . T . PASS END=39095385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 39095386 . G . PASS END=39095399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 39095400 . T . PASS END=39095401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 39095402 . C . PASS END=39095402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 39095403 . C . PASS END=39095403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 39095404 . G . PASS END=39095442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:26,0 chr2 39095443 . C . PASS END=39095446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,883:0,81,255:28,0 chr2 39095447 . T . PASS END=39095447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,864:0,37,255:26,0 chr2 39095448 . G . PASS END=39095450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,993:0,84,255:28,0 chr2 39095451 . A . PASS END=39095451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,876:0,51,255:26,0 chr2 39095452 . T . PASS END=39095453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 39095454 . T . PASS END=39095454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr2 39095455 . A . PASS END=39095456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 39095457 . T . PASS END=39095457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 39095458 . G . PASS END=39095458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1101:0,90,255:30,0 chr2 39095459 . G . PASS END=39095459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 39095460 . C . PASS END=39095464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 39095465 . C . PASS END=39095466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:29,0 chr2 39095467 . C . PASS END=39095467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 39095468 . C . PASS END=39095468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 39095469 . T . PASS END=39095469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 39095470 . G . PASS END=39095471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,950:0,60,255:26,0 chr2 39095472 . C . PASS END=39095475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:31,0 chr2 39095476 . T . PASS END=39095476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1140:0,72,255:30,0 chr2 39095477 . C . PASS END=39095488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1132:0,83,255:31,0 chr2 39095489 . G . PASS END=39095489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:26,0 chr2 39095490 . A . PASS END=39095491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr2 39095492 . G . PASS END=39095492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,962:0,38,255:24,0 chr2 39095493 . A . PASS END=39095521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,884:0,61,255:25,0 chr2 39095522 . C . PASS END=39095522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 39095523 . C . PASS END=39095543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 39095544 . T . PASS END=39095547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:19,0 chr2 39103194 . C . PASS END=39103251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,113,1568:0,113,255:40,0 chr2 39107320 . C . PASS END=39107370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:82:0,120,1800:0,174,255:40,0 chr2 39107741 . A . PASS END=39107847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,111,1552:0,116,255:40,0 chr2 39108583 . A . PASS END=39108583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 39108584 . T . PASS END=39108584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1134:0,64,255:34,0 chr2 39108585 . G . PASS END=39108719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:38:0,84,1305:0,84,255:40,0 chr2 39109554 . G . PASS END=39109557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,120,1800:0,132,255:40,0 chr2 39109558 . G A, 45.37 PASS DP=49;MQ=249.82;MQRankSum=5.222;ReadPosRankSum=0.544;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,19,0:0.388,0.000:49:14,9,0:16,10,0:44:80,0,47,180,180,180:255,0,255:30,0:4.5373e+01,1.6956e-04,5.0000e+01,1.8014e+02,2.1491e+02,1.8315e+02:0.00,34.77,37.78,34.77,69.54,37.78:24,6,13,6:14,16,9,10 chr2 39109559 . A . PASS END=39109595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,108,1685:0,108,255:40,0 chr2 39109596 . A . PASS END=39109656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,148,255:40,0 chr2 39117023 . G . PASS END=39117079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,122,255:40,0 chr2 39117080 . A . PASS END=39117092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,109,1778:0,109,255:40,0 chr2 39146589 . A . PASS END=39146613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:99:0,120,1800:0,255,255:40,0 chr2 39148515 . G . PASS END=39148564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,146,255:40,0 chr2 39156048 . T . PASS END=39156212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:33:0,85,1279:0,85,255:40,0 chr2 39156850 . G . PASS END=39156971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,114,1710:0,121,255:40,0 chr2 39158250 . G . PASS END=39158263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,586:0,44,255:19,0 chr2 39158264 . A . PASS END=39158295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,656:0,60,255:26,0 chr2 39158296 . G . PASS END=39158301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:28,0 chr2 39158302 . G . PASS END=39158302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr2 39158303 . G . PASS END=39158303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39158304 . A . PASS END=39158361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,892:0,61,255:26,0 chr2 39158362 . A . PASS END=39158379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,649:0,41,255:18,0 chr2 39158380 . G . PASS END=39158380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:14,0 chr2 39158381 . C . PASS END=39158391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:16,0 chr2 39158392 . G . PASS END=39158392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 39162916 . C . PASS END=39162975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:42:0,99,1485:0,119,255:40,0 chr2 39164476 . G . PASS END=39164480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,886:0,61,255:26,0 chr2 39164481 . A . PASS END=39164481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:26,0 chr2 39164482 . A . PASS END=39164482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 39164483 . C . PASS END=39164483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39164484 . C . PASS END=39164487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:53:28:0,53,963:0,53,255:28,0 chr2 39164488 . C . PASS END=39164488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 39164489 . A . PASS END=39164489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 39164490 . A . PASS END=39164504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1062:0,84,255:33,0 chr2 39164505 . G . PASS END=39164548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1195:0,88,255:36,0 chr2 39164549 . C . PASS END=39164549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr2 39164550 . C . PASS END=39164555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 39164556 . C . PASS END=39164556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr2 39164557 . C . PASS END=39164598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1172:0,83,255:33,0 chr2 39164599 . G . PASS END=39164609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:25,0 chr2 39164610 . G . PASS END=39164633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,737:0,47,255:19,0 chr2 39164634 . C . PASS END=39164639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 39164640 . G . PASS END=39164640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 39164641 . A . PASS END=39164643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 39164644 . C . PASS END=39164671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:18,0 chr2 39164672 . A . PASS END=39164684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 39164685 . G . PASS END=39164685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 39164686 . A . PASS END=39164700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,488:0,39,255:13,0 chr2 39171042 . C . PASS END=39171171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:33:0,96,1263:0,98,255:40,0 chr2 39178130 . C . PASS END=39178142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr2 39178143 . T . PASS END=39178143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 39178144 . C . PASS END=39178167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,886:0,72,255:26,0 chr2 39178168 . A . PASS END=39178168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39178169 . C . PASS END=39178169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 39178170 . C . PASS END=39178170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39178171 . T . PASS END=39178171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 39178172 . G . PASS END=39178172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39178173 . G . PASS END=39178173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 39178174 . A . PASS END=39178211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,992:0,80,255:31,0 chr2 39178212 . C . PASS END=39178249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr2 39178250 . A . PASS END=39178250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr2 39178251 . A . PASS END=39178253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 39178254 . A . PASS END=39178254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 39178255 . A . PASS END=39178262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 39180303 . A . PASS END=39180309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1205:0,105,255:36,0 chr2 39180310 . T . PASS END=39180310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1137:0,58,255:33,0 chr2 39180311 . C . PASS END=39180315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1288:0,105,255:36,0 chr2 39180316 . A . PASS END=39180316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:34,0 chr2 39180317 . T . PASS END=39180386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:37:0,97,1281:0,97,255:40,0 chr2 39181514 . G . PASS END=39181597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,108,1612:0,115,255:40,0 chr2 39184040 . A . PASS END=39184188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,101,1356:0,101,255:40,0 chr2 39185175 . G . PASS END=39185178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,986:0,78,255:26,0 chr2 39185179 . T . PASS END=39185339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1024:0,81,255:40,0 chr2 39186982 . A . PASS END=39187124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,93,255:40,0 chr2 39187125 . C . PASS END=39187137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 39187138 . C . PASS END=39187138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:20,0 chr2 39187139 . G . PASS END=39187152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,922:0,69,255:24,0 chr2 39187153 . C . PASS END=39187159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr2 39187160 . C . PASS END=39187167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 39187168 . C . PASS END=39187168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 39187169 . A . PASS END=39187174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39187175 . G . PASS END=39187175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 39187176 . A . PASS END=39187180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,927:0,81,255:28,0 chr2 39187181 . G . PASS END=39187181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 39187182 . A . PASS END=39187189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 39187190 . T C, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,13,0:0,17,0:87:175,90,0,1161,90,1161:255,90,0:0,0:1.3729e+02,8.7291e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,20:0,0,13,17 chr2 39187191 . C . PASS END=39187198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 39187199 . G . PASS END=39187199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 39187200 . C . PASS END=39187210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 39187211 . G . PASS END=39187213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 39187214 . A . PASS END=39187214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 39187215 . A . PASS END=39187227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr2 39187228 . C . PASS END=39187261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr2 39187262 . C . PASS END=39187264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 39187265 . G . PASS END=39187280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,917:0,64,255:26,0 chr2 39187281 . C . PASS END=39187286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 39187287 . A . PASS END=39187309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,841:0,61,255:25,0 chr2 39187310 . A . PASS END=39187311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 39187312 . C . PASS END=39187324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,901:0,62,255:25,0 chr2 39187325 . G . PASS END=39187325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:18,0 chr2 39187326 . C . PASS END=39187327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 39187328 . C . PASS END=39187350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 39187351 . G . PASS END=39187361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 39187362 . T . PASS END=39187362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:16,0 chr2 39187363 . C . PASS END=39187376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 39187377 . C . PASS END=39187377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 39187378 . G . PASS END=39187385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 39187386 . C . PASS END=39187416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:24,0 chr2 39187417 . G . PASS END=39187417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 39187418 . C . PASS END=39187423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 39187424 . G . PASS END=39187469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,607:0,47,255:19,0 chr2 39187470 . C . PASS END=39187472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,35,255:11,0 chr2 39187473 . T . PASS END=39187473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr2 39187474 . G . PASS END=39187478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,527:0,31,255:12,0 chr2 39187479 . A . PASS END=39187479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 39187480 . G . PASS END=39187481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:12,0 chr2 39187482 . G . PASS END=39187518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 39187519 . A G, 83.12 PASS DP=12;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,4,0:0,8,0:33:121,36,0,464,36,464:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1193e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,9:0,0,5,7 chr2 39187520 . C . PASS END=39187526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 39187527 . C . PASS END=39187537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 39187538 . G . PASS END=39187538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 39187539 . C . PASS END=39187556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr2 39187557 . C . PASS END=39187568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 39187569 . C . PASS END=39187591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr2 39187592 . C . LowGQ END=39187680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,39:3,0 chr2 39187681 . G . PASS END=39187688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr2 39187689 . G . PASS END=39187729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,243:0,21,243:9,0 chr2 39187730 . A . PASS END=39187732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 39187733 . T . PASS END=39187733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 39187734 . T . PASS END=39187747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 39187748 . A . PASS END=39187748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 39187749 . G . PASS END=39187761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 39187762 . A . PASS END=39187762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 39187763 . A . PASS END=39187771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 39187772 . T . PASS END=39187773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 39187774 . T . PASS END=39187775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr2 39187776 . T . PASS END=39187789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,327:0,27,255:9,0 chr2 39193147 . G . PASS END=39193151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 39193152 . G . PASS END=39193153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,986:0,60,255:28,0 chr2 39193154 . A . PASS END=39193273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1133:0,80,255:40,0 chr2 39193274 . T . PASS END=39193274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:30,0 chr2 39193275 . C . PASS END=39193286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1105:0,96,255:32,0 chr2 39199011 . A . PASS END=39199062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,161,255:40,0 chr2 39200855 . G . PASS END=39200984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:46:0,120,1800:0,138,255:40,0 chr2 39208700 . T . PASS END=39208700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 39208855 . G . PASS END=39208855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,196,255:40,0 chr2 39208888 . C . PASS END=39208889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr2 39208942 . A . PASS END=39208942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 39208951 . A . PASS END=39208951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr2 39208976 . C . PASS END=39208976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 39209154 . A . PASS END=39209154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 39209215 . A . PASS END=39209215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 39209238 . C . PASS END=39209238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr2 39209240 . A . PASS END=39209240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 39209396 . A . PASS END=39209396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 39209502 . T . PASS END=39209502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 39209514 . T . PASS END=39209514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,130,255:40,0 chr2 39209547 . T . PASS END=39209547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 39209639 . A . PASS END=39209639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1435:0,117,255:39,0 chr2 39209674 . G . PASS END=39209674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 39209713 . T . PASS END=39209713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 39209735 . A . PASS END=39209735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 39209772 . G . PASS END=39209772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 39209807 . A . PASS END=39209807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 39209816 . G . PASS END=39209816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 39209924 . T . PASS END=39209924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1226:0,91,255:33,0 chr2 39210072 . G . PASS END=39210072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 39210303 . C . PASS END=39210303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 39210453 . G . PASS END=39210453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 39210458 . C . PASS END=39210458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 39210468 . C . PASS END=39210468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 39210708 . G . LowGQ END=39210708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:18,0:18:0:18:0,0,0:0,54,255:0,0 chr2 39210719 . T TTA, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,10,0:0,12,0:63:145,66,0,852,66,852:255,66,0:0,29:1.1321e+02,6.3214e+01,2.0709e-06,4.5000e+02,9.7984e+01,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,15,7:0,0,7,15 chr2 39210747 . A . PASS END=39210747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:28,0 chr2 39210756 . A . PASS END=39210756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 39210898 . A . PASS END=39210898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 39210909 . T . PASS END=39210909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:31,0 chr2 39210914 . A . PASS END=39210914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 39210967 . C . PASS END=39210967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 39211203 . T . PASS END=39211203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 39211270 . T . PASS END=39211270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 39211281 . C . PASS END=39211281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 39211287 . G . PASS END=39211287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 39211324 . T . PASS END=39211324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:51:42:0,51,765:0,126,255:17,0 chr2 39211376 . A . PASS END=39211376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,117,1755:0,138,255:39,0 chr2 39211430 . C . PASS END=39211430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 39211488 . C . PASS END=39211488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:42:0,96,1440:0,126,255:32,0 chr2 39211553 . T . PASS END=39211553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 39211569 . C . PASS END=39211569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 39211574 . G . PASS END=39211574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1519:0,110,255:40,0 chr2 39211580 . T . PASS END=39211580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 39211656 . T . PASS END=39211656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 39211662 . G . PASS END=39211662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 39211695 . A . PASS END=39211695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 39211741 . T . PASS END=39211741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:39,0 chr2 39211867 . C . PASS END=39211867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:103:0,120,1800:0,255,255:40,0 chr2 39211916 . C . PASS END=39211916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:95:0,120,1800:0,255,255:40,0 chr2 39212056 . C . PASS END=39212056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 39212092 . G . PASS END=39212092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 39212110 . C . PASS END=39212110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:25,0 chr2 39212198 . A . PASS END=39212198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,912:0,51,255:28,0 chr2 39212207 . T . PASS END=39212207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 39212269 . C . PASS END=39212269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 39212301 . G . PASS END=39212301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr2 39212323 . A . PASS END=39212323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 39212406 . G . PASS END=39212406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 39212421 . G . PASS END=39212421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 39212431 . G . PASS END=39212431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 39212482 . T . PASS END=39212482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:99:54:0,112,1800:0,112,255:38,0 chr2 39212544 . T . PASS END=39212544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:51:58:0,51,765:0,91,255:15,0 chr2 39212557 . G . PASS END=39212557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:3:54:0,3,45:0,123,255:0,0 chr2 39212667 . G . PASS END=39212667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1598:0,116,255:40,0 chr2 39212735 . A . PASS END=39212735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 39212742 . G . PASS END=39212742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 39212747 . A . PASS END=39212747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 39212780 . T . PASS END=39212780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr2 39212855 . G . PASS END=39212855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:37,0 chr2 39212965 . T . PASS END=39213121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1172:0,82,255:40,0 chr2 39213122 . A . PASS END=39213131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,1080:0,76,255:26,0 chr2 39213132 . T . PASS END=39213168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1172:0,80,255:31,0 chr2 39213169 . A . PASS END=39213188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:26:0,64,875:0,64,255:26,0 chr2 39213189 . G . PASS END=39213192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 39213193 . T . PASS END=39213194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:28:0,72,1033:0,76,255:26,0 chr2 39213195 . G . PASS END=39213201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:30,0 chr2 39213202 . G . PASS END=39213202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:28,0 chr2 39213203 . G . PASS END=39213204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:30,0 chr2 39213205 . G . PASS END=39213205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:28,0 chr2 39213206 . G . PASS END=39213222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1141:0,82,255:30,0 chr2 39213223 . G . PASS END=39213223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 39213224 . A . PASS END=39213226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 39213227 . G . PASS END=39213227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr2 39213228 . C . PASS END=39213229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr2 39213230 . T . PASS END=39213230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 39213231 . T . PASS END=39213240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr2 39213241 . A . PASS END=39213241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 39213242 . C . PASS END=39213255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1058:0,80,255:32,0 chr2 39213256 . A . PASS END=39213256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,980:0,63,255:28,0 chr2 39213257 . G . PASS END=39213301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1083:0,80,255:36,0 chr2 39213302 . G . PASS END=39213302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr2 39213303 . T . PASS END=39213307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,99,1485:0,111,255:36,0 chr2 39213308 . A . PASS END=39213308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:35,0 chr2 39213309 . C . PASS END=39213357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,100,1360:0,100,255:40,0 chr2 39213358 . A . PASS END=39213358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:34,0 chr2 39213359 . G . PASS END=39213380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,105,1367:0,110,255:40,0 chr2 39213381 . A . PASS END=39213381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1388:0,62,255:36,0 chr2 39213382 . T . PASS END=39213394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1421:0,81,255:39,0 chr2 39213395 . G . PASS END=39213395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:35,0 chr2 39213396 . C . PASS END=39213433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1192:0,83,255:37,0 chr2 39213434 . C . PASS END=39213456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 39214605 . T . PASS END=39214605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 39214614 . C . PASS END=39214727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:30:0,81,1117:0,83,255:40,0 chr2 39214728 . A . PASS END=39214732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,73,255:23,0 chr2 39216404 . T . PASS END=39216404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 39216411 . T . PASS END=39216456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:69:0,120,1800:0,191,255:40,0 chr2 39216458 . G . PASS END=39216458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 39222264 . T . PASS END=39222266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:30,0 chr2 39222267 . A . PASS END=39222267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 39222268 . G . PASS END=39222528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:83:31:0,83,1135:0,83,255:40,0 chr2 39224063 . A . PASS END=39224179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:55:0,120,1800:0,148,255:40,1 chr2 39224394 . T . PASS END=39224566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:58:0,120,1800:0,125,255:40,0 chr2 39233542 . G . PASS END=39233542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1406:0,114,255:38,0 chr2 39233553 . C . PASS END=39233670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:39:0,103,1352:0,103,255:40,0 chr2 39233677 . G . PASS END=39233677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 39234172 . C . PASS END=39234334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,5:76:82:29:0,82,990:0,82,255:40,0 chr2 39234342 . T . PASS END=39234342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:94:57:0,94,1934:0,94,255:40,3 chr2 39234343 . A . PASS END=39234343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,3:58:70:58:0,70,1861:0,70,255:40,3 chr2 39237725 . T . PASS END=39237844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:53:0,120,1800:0,158,255:40,0 chr2 39237849 . A . PASS END=39237849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr2 39239267 . C . PASS END=39239489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:82:32:0,82,1305:0,82,255:40,0 chr2 39240600 . C . PASS END=39240627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:81:0,120,1800:0,218,255:40,0 chr2 39240628 . T . PASS END=39240704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:62:0,120,1800:0,148,255:40,0 chr2 39240719 . C . PASS END=39240719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 39241008 . C . PASS END=39241128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:36:0,93,1283:0,93,255:40,0 chr2 39241129 . A . PASS END=39241129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1322:0,71,255:38,0 chr2 39241130 . C . PASS END=39241130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 39241888 . T . PASS END=39241888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 39241906 . C . PASS END=39241987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,120,1800:0,171,255:40,0 chr2 39249711 . C . PASS END=39249715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 39249716 . T . PASS END=39250366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:30:0,83,1296:0,83,255:40,1 chr2 39251146 . T . PASS END=39251146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 39251148 . C . PASS END=39251148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 39251151 . C . PASS END=39251278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:86:45:0,86,1536:0,86,255:40,0 chr2 39261913 . C . PASS END=39261921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,142,255:40,0 chr2 39262353 . C . PASS END=39262451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:82:37:0,82,1204:0,82,255:40,1 chr2 39262531 . C . PASS END=39262641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:98:46:0,98,1699:0,98,255:40,0 chr2 39262645 . A . PASS END=39262645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 39278273 . T . PASS END=39278273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 39278280 . C . PASS END=39278280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 39278285 . C . PASS END=39278428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:53:0,120,1800:0,148,255:40,0 chr2 39281755 . A . PASS END=39281767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:60:0,120,1800:0,147,255:40,0 chr2 39281768 . A . PASS END=39281946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:84:37:0,84,1327:0,84,255:40,0 chr2 39281947 . A . PASS END=39281947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr2 39281948 . A . PASS END=39281950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1373:0,84,255:34,0 chr2 39281951 . A . PASS END=39281951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:31,0 chr2 39281952 . T . PASS END=39281952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1236:0,83,255:31,0 chr2 39281953 . A . PASS END=39281953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1230:0,62,255:29,0 chr2 39281954 . T . PASS END=39281955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,95,255:27,0 chr2 39281956 . C . PASS END=39281957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1216:0,72,255:27,0 chr2 39281958 . T . PASS END=39281959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:27,0 chr2 39281960 . A . PASS END=39281961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:34:0,60,900:0,86,255:20,0 chr2 39281962 . T . PASS END=39281964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:48:33:0,48,720:0,83,255:18,0 chr2 39281968 . T . PASS END=39281969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:42:29:0,42,630:0,71,255:14,0 chr2 39281974 . C . PASS END=39281974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 39283833 . A . PASS END=39283833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr2 39283843 . C . PASS END=39284007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:48:0,106,1753:0,106,255:40,2 chr2 39285814 . C . PASS END=39285945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:34:0,84,1210:0,86,255:40,0 chr2 39294760 . T . PASS END=39294760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 39294769 . C . PASS END=39294894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:52:0,120,1800:0,129,255:40,0 chr2 39294908 . G . PASS END=39294908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 39347471 . C . PASS END=39347471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 39347477 . C . PASS END=39347509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:13,0 chr2 39347510 . C . PASS END=39347516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 39347517 . G . PASS END=39347522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 39347523 . T . PASS END=39347523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 39347524 . C . PASS END=39347524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 39347525 . T . PASS END=39347525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,386:0,9,255:10,0 chr2 39347526 . T . PASS END=39347563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 39347578 . G . PASS END=39347578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 39351805 . T . PASS END=39351870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:41:0,96,1440:0,123,255:40,0 chr2 39403136 . C . PASS END=39403237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,156,255:40,0 chr2 39405688 . T . PASS END=39405886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1215:0,91,255:40,0 chr2 39405887 . G . PASS END=39405890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 39405891 . T . PASS END=39405891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 39405892 . A . PASS END=39405900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 39406307 . T . PASS END=39406462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:51:0,120,1800:0,123,255:40,0 chr2 39411732 . C . PASS END=39411788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:78:0,120,1800:0,206,255:40,0 chr2 39414768 . C . PASS END=39414850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:38:0,99,1396:0,101,255:40,0 chr2 39417446 . C . PASS END=39417609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:33:0,85,1196:0,85,255:40,0 chr2 39417610 . G . PASS END=39417610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:28,0 chr2 39417611 . T . PASS END=39417622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:29,0 chr2 39417623 . C . PASS END=39417643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 39421430 . T . PASS END=39421430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:104:0,120,1800:0,255,255:40,0 chr2 39431370 . T . PASS END=39431443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:67:0,120,1800:0,150,255:40,0 chr2 39431668 . T . PASS END=39431758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:65:0,120,1800:0,162,255:40,0 chr2 39440541 . G . PASS END=39440613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:66:0,120,1800:0,182,255:40,0 chr2 39452980 . C . PASS END=39453101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,120,1800:0,138,255:40,0 chr2 39456506 . C . PASS END=39456673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:35:0,87,1305:0,105,255:40,0 chr2 39477759 . T . PASS END=39477846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,137,255:40,0 chr2 39478971 . C . PASS END=39479026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,177,255:40,0 chr2 39481591 . C . PASS END=39481661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,137,255:40,0 chr2 39485489 . C . PASS END=39485581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,118,1800:0,118,255:40,0 chr2 39485660 . A . PASS END=39485721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,83,255:40,0 chr2 39485722 . G . PASS END=39485726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,74,255:25,0 chr2 39485727 . A . PASS END=39485728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 39487747 . C . PASS END=39487918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:35:0,84,1260:0,92,255:40,0 chr2 39492344 . C . PASS END=39492447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:48:0,120,1800:0,134,255:40,0 chr2 39494330 . C . PASS END=39494388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:96:0,120,1800:0,255,255:40,0 chr2 39499424 . C . PASS END=39499541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,102,1465:0,102,255:40,1 chr2 39499623 . C . PASS END=39499683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:83:0,120,1800:0,233,255:40,0 chr2 39505548 . C . PASS END=39505562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:79:0,120,1800:0,206,255:40,0 chr2 39505563 . T . PASS END=39505627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:76:0,120,1800:0,211,255:40,0 chr2 39507413 . C . PASS END=39507416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,194,255:40,0 chr2 39507417 . T A, 254.65 PASS DP=69;MQ=249.94;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,35,0:0,34,0:205:292,208,0,2622,208,2622:255,214,0:0,0:2.5465e+02,2.0465e+02,0.0000e+00,4.5000e+02,2.3942e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,43,26:0,0,35,34 chr2 39507418 . G . PASS END=39507454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:72:0,120,1800:0,193,255:40,0 chr2 39507455 . T . PASS END=39507497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:89:0,120,1800:0,232,255:40,0 chr2 39509654 . A . PASS END=39509695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:70:0,120,1800:0,193,255:40,0 chr2 39513993 . T . PASS END=39514098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,116,1627:0,116,255:40,0 chr2 39514099 . C . PASS END=39514105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,114,1566:0,114,255:40,0 chr2 39515262 . C . PASS END=39515411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:40:0,84,1260:0,116,255:40,0 chr2 39515412 . T . PASS END=39515421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:29:0,69,1035:0,87,255:25,0 chr2 39517433 . C . PASS END=39517475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:103:0,120,1800:0,244,255:40,0 chr2 39519914 . T . PASS END=39519967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,159,255:40,0 chr2 39520371 . C . PASS END=39520409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,1:115:99:91:0,120,1800:0,255,255:40,0 chr2 39526884 . T . PASS END=39526942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:92:0,120,1800:0,252,255:40,0 chr2 39530256 . T . PASS END=39530258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:34,0 chr2 39535084 . C . PASS END=39535146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:48:0,120,1800:0,143,255:40,0 chr2 39536602 . A . PASS END=39536622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:58:0,116,1800:0,116,255:40,0 chr2 39536623 . C . PASS END=39536629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:78:0,118,1800:0,118,255:40,0 chr2 39536630 . C . PASS END=39536630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,8:84:61:84:0,61,2584:0,61,255:40,0 chr2 39536631 . T . PASS END=39536648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,5:85:99:84:0,120,1800:0,133,255:40,0 chr2 39536649 . T . PASS END=39536649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,10:85:68:85:0,68,2612:0,68,255:40,0 chr2 39536650 . C . PASS END=39536660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:82:81:0,82,1800:0,82,255:40,0 chr2 39542451 . A . PASS END=39542529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:75:0,120,1800:0,218,255:40,0 chr2 39552659 . C . PASS END=39552769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:71:0,120,1800:0,192,255:40,0 chr2 39552871 . C . PASS END=39552952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,3:94:99:86:0,120,1800:0,225,255:40,2 chr2 39553040 . C . PASS END=39553102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:107:0,120,1800:0,255,255:40,0 chr2 39553287 . C . PASS END=39553308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,113,1559:0,113,255:40,0 chr2 39553309 . T . PASS END=39553377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,113,1551:0,113,255:40,0 chr2 39553378 . A . PASS END=39553378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:41:47:0,41,1327:0,41,255:37,0 chr2 39553379 . A . PASS END=39553379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1423:0,74,255:39,0 chr2 39553380 . C . PASS END=39553403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1305:0,93,255:40,0 chr2 39553404 . A . PASS END=39553406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:26,0 chr2 39553407 . T . PASS END=39553414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,88,255:28,0 chr2 39553415 . C . PASS END=39553418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr2 39559058 . C . PASS END=39559130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:54:0,120,1800:0,161,255:40,0 chr2 39560673 . C . PASS END=39560715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,1:117:99:98:0,120,1800:0,255,255:40,0 chr2 39564061 . C . PASS END=39564108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,1:109:99:99:0,120,1800:0,245,255:40,0 chr2 39564667 . C . PASS END=39564722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,167,255:40,0 chr2 39570529 . C . PASS END=39570593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:73:0,120,1800:0,198,255:40,0 chr2 39583356 . T . PASS END=39583408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:68:0,120,1800:0,176,255:40,0 chr2 39583409 . A . PASS END=39583445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:71:0,120,1800:0,196,255:40,0 chr2 39583446 . A G, 256.29 PASS DP=70;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,33,0:0,37,0:206:294,209,0,2610,209,2610:255,213,0:0,0:2.5629e+02,2.0629e+02,0.0000e+00,4.5000e+02,2.4106e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,39:0,0,36,34 chr2 39583447 . A . PASS END=39583480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,118,1800:0,118,255:40,0 chr2 39605207 . C . PASS END=39605264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:70:0,120,1800:0,186,255:40,0 chr2 39664033 . C . PASS END=39664058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:23,0 chr2 39664059 . T . PASS END=39664059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 39664060 . G . PASS END=39664083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:25,0 chr2 39664084 . G . PASS END=39664085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 39664086 . C . PASS END=39664094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 39664095 . G . PASS END=39664097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 39664098 . T . PASS END=39664101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 39664102 . G . PASS END=39664106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,737:0,47,255:19,0 chr2 39664107 . A . PASS END=39664114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr2 39664115 . A . PASS END=39664128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 39893115 . A . PASS END=39893138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr2 39893139 . G . PASS END=39893148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:15,0 chr2 39893149 . T . PASS END=39893149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 39893150 . C . PASS END=39893165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr2 39893166 . T . PASS END=39893166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr2 39893167 . C . PASS END=39893169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,653:0,21,255:20,0 chr2 39893170 . T . PASS END=39893170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr2 39893171 . G . PASS END=39893198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 39893199 . G . PASS END=39893230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,620:0,48,255:18,0 chr2 39893231 . C . PASS END=39893231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 39893232 . A . PASS END=39893237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 39893238 . A . PASS END=39893250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 39893251 . G . PASS END=39893251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 39893252 . C . PASS END=39893277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 39893278 . A . PASS END=39893288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 39893289 . C . PASS END=39893294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 39893295 . C . PASS END=39893349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 39893350 . C . PASS END=39893355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr2 39893356 . G . PASS END=39893369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr2 39893370 . G . PASS END=39893388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,374:0,30,255:11,0 chr2 39893389 . C . PASS END=39893390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 39893391 . C . PASS END=39893453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:13,0 chr2 39893454 . C . PASS END=39893455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 39893456 . C . PASS END=39893481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 39893482 . T . PASS END=39893482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 39893483 . C . PASS END=39893486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 39893487 . C . PASS END=39893495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,315:0,20,255:9,0 chr2 39893496 . G . PASS END=39893496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr2 39893497 . A . PASS END=39893504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:20:9:0,20,360:0,20,255:8,0 chr2 39893505 . A . PASS END=39893514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 39931221 . G . PASS END=39931334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:43:0,106,1753:0,106,255:40,0 chr2 39934189 . A . PASS END=39934189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr2 39934190 . T . PASS END=39934203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,430:0,42,255:15,0 chr2 39934204 . C . PASS END=39934204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 39934205 . T . PASS END=39934209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 39934210 . G . PASS END=39934210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 39934211 . C . PASS END=39934213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr2 39934214 . C . PASS END=39934233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 39934234 . T . PASS END=39934234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 39934235 . C . PASS END=39934244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:23,0 chr2 39934245 . G . PASS END=39934245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 39934246 . G . PASS END=39934258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:25,0 chr2 39934259 . C . PASS END=39934259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:23,0 chr2 39934260 . A . PASS END=39934260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 39934261 . C . PASS END=39934261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 39934262 . A . PASS END=39934274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,893:0,75,255:25,0 chr2 39934275 . T . PASS END=39934275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 39934276 . G . PASS END=39934291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 39934292 . C . PASS END=39934326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,53,255:19,0 chr2 39938624 . G . PASS END=39938682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:36:0,85,1443:0,85,255:40,0 chr2 39944150 . G . PASS END=39944153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 39944154 . A . PASS END=39944161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr2 39944162 . C . PASS END=39944162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 39944163 . C . PASS END=39944391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:86:29:0,86,900:0,86,255:40,0 chr2 39962369 . T . PASS END=39962369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,713:0,36,255:21,0 chr2 39962370 . A . PASS END=39962375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:24,0 chr2 39962376 . T . PASS END=39962376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 39962377 . A . PASS END=39962378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 39962379 . A . PASS END=39962380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 39962381 . G . PASS END=39962381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 39962382 . C . PASS END=39962382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 39962383 . C . PASS END=39962385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:25,0 chr2 39962386 . G . PASS END=39962387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,591:0,41,255:23,0 chr2 39962388 . G . PASS END=39962388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 39962389 . T . PASS END=39962389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 39962390 . A . LowGQ END=39962390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,6:27:0:27:0,0,523:47,0,255:21,0 chr2 39962391 . T . PASS END=39962391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr2 39962392 . C . PASS END=39962392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:8:29:0,8,699:0,8,255:26,0 chr2 39962393 . T . PASS END=39962393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr2 39962394 . C . PASS END=39962394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,841:0,40,255:27,0 chr2 39962395 . T . PASS END=39962395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:30,0 chr2 39962396 . C . PASS END=39962397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr2 39962398 . C . PASS END=39962398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:30,0 chr2 39962399 . C . PASS END=39962400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr2 39962401 . C . PASS END=39962415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1125:0,80,255:32,0 chr2 39962416 . A . PASS END=39962417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:31,0 chr2 39962418 . T . PASS END=39962430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:32,0 chr2 39962431 . C . PASS END=39962431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr2 39962432 . A . PASS END=39962435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 39962436 . A . PASS END=39962439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr2 39962440 . C . PASS END=39962442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 39962443 . T . PASS END=39962443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 39962444 . A . PASS END=39962444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr2 39962445 . T . PASS END=39962454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 39963875 . C . PASS END=39964168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1147:0,80,255:40,0 chr2 39964169 . C . PASS END=39964181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,84,255:26,0 chr2 39964182 . C . PASS END=39964184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 39964185 . C . PASS END=39964199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,67,255:25,0 chr2 39971510 . C . PASS END=39971618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:69:0,120,1800:0,206,255:40,0 chr2 39978233 . C . PASS END=39978324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,108,1620:0,123,255:40,0 chr2 39978325 . A . PASS END=39978330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:41:0,84,1260:0,123,255:36,0 chr2 39982435 . C . PASS END=39982549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:90:43:0,90,1350:0,113,255:40,0 chr2 39983029 . T . PASS END=39983100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:65:0,120,1800:0,179,255:40,0 chr2 39984488 . T . PASS END=39984508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,96,255:35,0 chr2 39988471 . C . PASS END=39988558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,129,255:40,0 chr2 39993197 . C . PASS END=39993204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,195,255:40,0 chr2 39993205 . A . PASS END=39993249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,157,255:40,0 chr2 39995564 . C . PASS END=39995641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,207,255:40,0 chr2 39995991 . C . PASS END=39996331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:35:0,81,1340:0,81,255:40,0 chr2 39996850 . C . PASS END=39997259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:50:0,120,1800:0,145,255:40,0 chr2 39998645 . C . PASS END=39998780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,1:122:99:89:0,120,1800:0,201,255:40,0 chr2 40006254 . C . PASS END=40006256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr2 40006257 . C . PASS END=40006257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 40006258 . G . PASS END=40006261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 40006262 . C . PASS END=40006262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 40006263 . C . PASS END=40006263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 40006264 . G . PASS END=40006264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr2 40006265 . C . PASS END=40006298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1033:0,84,255:33,0 chr2 40006299 . C . PASS END=40006299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr2 40006300 . T . PASS END=40006314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1241:0,99,255:34,0 chr2 40006315 . G . PASS END=40006315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:32,0 chr2 40006316 . C . PASS END=40006337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1241:0,86,255:31,0 chr2 40006338 . A . PASS END=40006339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1131:0,77,255:26,0 chr2 40006340 . C . PASS END=40006341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 40006342 . T . PASS END=40006355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:25:0,62,922:0,62,255:25,0 chr2 40006356 . T . PASS END=40006356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:21,0 chr2 40006357 . G . PASS END=40006359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 40006360 . T . PASS END=40006361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:20,0 chr2 40006362 . T . PASS END=40006366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 40006367 . G . PASS END=40006377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,49,255:18,0 chr2 40006378 . A . PASS END=40006378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 40006379 . T . PASS END=40006379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 40342393 . T . PASS END=40342410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr2 40342411 . G . PASS END=40342418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,791:0,66,255:24,0 chr2 40342419 . C . PASS END=40342419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 40342420 . C . PASS END=40342440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,879:0,78,255:26,0 chr2 40342441 . G . PASS END=40342445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 40342446 . A . PASS END=40342447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 40342448 . A . PASS END=40342543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1001:0,80,255:39,0 chr2 40342544 . A . PASS END=40342544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 40342545 . C . PASS END=40342552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 40342553 . T . PASS END=40342553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,995:0,54,255:29,0 chr2 40342554 . T . PASS END=40342557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 40342558 . G . PASS END=40342558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 40342559 . A . PASS END=40342580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 40342581 . T . PASS END=40342581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 40342582 . G . PASS END=40342583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 40342584 . C . PASS END=40342589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,1000:0,70,255:26,0 chr2 40342590 . A . PASS END=40342594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 40342595 . A . PASS END=40342600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 40342601 . C . PASS END=40342608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 40342609 . C . PASS END=40342610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 40342611 . C . PASS END=40342612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 40342613 . T . PASS END=40342620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,972:0,73,255:27,0 chr2 40342621 . T . PASS END=40342621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 40342622 . T . PASS END=40342640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr2 40342641 . A . PASS END=40342654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 40342655 . G . PASS END=40342672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 40342673 . C . PASS END=40342673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 40342674 . C . PASS END=40342688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 40342689 . C . PASS END=40342690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 40342691 . G . PASS END=40342724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:24,0 chr2 40342725 . C . PASS END=40342726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 40342727 . G . PASS END=40342729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 40342730 . T . PASS END=40342769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,590:0,48,255:19,0 chr2 40366541 . C . PASS END=40366546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr2 40366547 . C . PASS END=40366547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 40366548 . T . PASS END=40366548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 40366549 . G . PASS END=40366549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 40366550 . A . PASS END=40366550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr2 40366551 . T . PASS END=40366557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1066:0,80,255:30,0 chr2 40366558 . A . PASS END=40366558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:29,0 chr2 40366559 . G . PASS END=40366816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:32:0,80,1125:0,80,255:40,1 chr2 40387905 . C . PASS END=40388004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:51:0,120,1800:0,153,255:40,0 chr2 40391994 . C . PASS END=40391997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 40391998 . A . PASS END=40391998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr2 40391999 . A . PASS END=40392000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,766:0,63,255:22,0 chr2 40392001 . T . PASS END=40392001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 40392002 . C . PASS END=40392005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 40392006 . G . PASS END=40392006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 40392007 . G . PASS END=40392008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr2 40392009 . T . PASS END=40392009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 40392010 . T . PASS END=40392010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 40392011 . C . PASS END=40392011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 40392012 . T . PASS END=40392016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 40392017 . T . PASS END=40392017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr2 40392018 . G . PASS END=40392018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 40392019 . A . PASS END=40392019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 40392020 . T . PASS END=40392023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,917:0,64,255:26,0 chr2 40392024 . T . PASS END=40392024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 40392025 . T . PASS END=40392025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 40392026 . C . PASS END=40392032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr2 40392033 . G . PASS END=40392033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 40392034 . G . PASS END=40392036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr2 40392037 . T . PASS END=40392040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 40392041 . C . PASS END=40392047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr2 40392048 . G . PASS END=40392048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr2 40392049 . A . PASS END=40392063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1050:0,90,255:33,0 chr2 40392064 . T . PASS END=40392064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr2 40392065 . C . PASS END=40392100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1178:0,83,255:34,0 chr2 40392101 . G . PASS END=40392101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 40392102 . T . PASS END=40392107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 40392108 . C . PASS END=40392124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,71,255:26,0 chr2 40397421 . C . PASS END=40397489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:46:0,116,1800:0,116,255:40,0 chr2 40401846 . C . PASS END=40401860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:132,0:132:99:128:0,120,1800:0,255,255:40,0 chr2 40401965 . C . PASS END=40401982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:94:0,120,1800:0,255,255:40,0 chr2 40402401 . C . PASS END=40402421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:94:0,120,1800:0,249,255:40,0 chr2 40404892 . C . PASS END=40404995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:56:0,120,1800:0,137,255:40,0 chr2 40405527 . C . PASS END=40405633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:29:0,81,1180:0,85,255:40,0 chr2 40505868 . T . PASS END=40505881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:90:0,120,1800:0,253,255:40,0 chr2 40505882 . T . PASS END=40505910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,207,255:40,0 chr2 40655613 . A . PASS END=40655621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,140,255:40,0 chr2 40655622 . T . PASS END=40657441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:35:0,84,1260:0,89,255:40,0 chr2 40678600 . C . PASS END=40678668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1075:0,90,255:34,0 chr2 42165743 . T . PASS END=42165753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,127,255:40,0 chr2 42174627 . A . PASS END=42174711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:149,0:149:99:113:0,120,1800:0,255,255:40,0 chr2 42180128 . C . PASS END=42180131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:31,0 chr2 42180132 . T . PASS END=42180132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 42180133 . C . PASS END=42180239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1119:0,80,255:37,0 chr2 42180240 . G . PASS END=42180240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr2 42180241 . G . PASS END=42180366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1194:0,83,255:38,0 chr2 42180367 . A . PASS END=42180367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1046:0,64,255:31,0 chr2 42180368 . G . PASS END=42180368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 42180369 . A . PASS END=42180369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1114:0,55,255:32,0 chr2 42180370 . T . PASS END=42180376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1402:0,98,255:35,0 chr2 42180377 . G . PASS END=42180377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:31,0 chr2 42180378 . G . PASS END=42180395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1256:0,94,255:38,0 chr2 42180396 . A . PASS END=42180396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1302:0,67,255:33,0 chr2 42180397 . G . PASS END=42180448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:36:0,93,1365:0,95,255:40,0 chr2 42181963 . C . PASS END=42181964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 42181965 . T . PASS END=42181965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 42181966 . G . PASS END=42181976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr2 42181977 . T . PASS END=42181977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 42181978 . C . PASS END=42181978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 42181979 . G . PASS END=42181993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,900:0,61,255:26,0 chr2 42181994 . G . PASS END=42181994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 42181995 . G . PASS END=42181995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 42181996 . A . PASS END=42182002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 42182003 . G . PASS END=42182004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr2 42182005 . T . PASS END=42182131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,917:0,80,255:35,0 chr2 42182132 . A . PASS END=42182132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 42182133 . A . PASS END=42182133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 42182134 . G . PASS END=42182141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 42182142 . C . PASS END=42182142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:23,0 chr2 42182143 . C . PASS END=42182165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr2 42182166 . A . PASS END=42182174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr2 42275340 . A . PASS END=42275368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr2 42275369 . G . PASS END=42275379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 42275380 . C . PASS END=42275380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:11,0 chr2 42275381 . C . PASS END=42275389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 42275390 . G . PASS END=42275402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr2 42275403 . C . PASS END=42275403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 42275404 . T . PASS END=42275405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 42275406 . A . PASS END=42275406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 42275407 . A . PASS END=42275430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:15,0 chr2 42275431 . A . PASS END=42275438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 42275439 . A . PASS END=42275439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 42275440 . G . PASS END=42275462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:11,0 chr2 42275463 . T . PASS END=42275463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 42275464 . C . PASS END=42275466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 42275467 . C . PASS END=42275467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr2 42275468 . G . PASS END=42275472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 42275473 . C . PASS END=42275473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 42275474 . G . PASS END=42275483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 42275484 . C . PASS END=42275484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr2 42275485 . G . PASS END=42275486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 42275487 . C . PASS END=42275487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr2 42275488 . G . PASS END=42275488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 42275489 . C . PASS END=42275489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 42275490 . G . PASS END=42275520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 42275521 . G . PASS END=42275523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr2 42275524 . C . PASS END=42275567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,127:0,15,127:6,0 chr2 42275568 . C . LowGQ END=42275599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,22:0,0,33:3,0 chr2 42275600 . G . PASS END=42275601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 42275602 . T . LowGQ END=42275621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,62:0,0,74:3,0 chr2 42275622 . C . LowGQ END=42275651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,39:0,0,69:3,0 chr2 42275652 . G . PASS END=42275657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 42275658 . C . PASS END=42275696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,72:0,9,72:3,0 chr2 42275697 . G . PASS END=42275706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 42275707 . C . PASS END=42275723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr2 42275724 . C . PASS END=42275764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 42275765 . G . PASS END=42275780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 42275781 . T . PASS END=42275786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 42275787 . A . PASS END=42275787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr2 42275788 . A . PASS END=42275804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 42275805 . C . PASS END=42275805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 42275806 . G . PASS END=42275811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 42275812 . C . PASS END=42275812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:11,0 chr2 42275813 . C . PASS END=42275834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 42275835 . A . PASS END=42275835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 42275836 . A . PASS END=42275836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 42275837 . G . PASS END=42275837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 42275838 . G . PASS END=42275838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 42275839 . C . PASS END=42275853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 42275854 . G . PASS END=42275854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 42275855 . C . PASS END=42275860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr2 42275861 . T . PASS END=42275861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 42275862 . C . PASS END=42275863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 42275864 . G . PASS END=42275865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 42275866 . G . PASS END=42275866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 42275867 . C . PASS END=42275886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,548:0,48,255:18,0 chr2 42275887 . G . PASS END=42275887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,549:0,21,255:14,0 chr2 42275888 . G . PASS END=42275888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr2 42275889 . G . PASS END=42275893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr2 42275894 . G . PASS END=42275896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 42275897 . G . PASS END=42275918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,690:0,54,255:19,0 chr2 42275919 . C . PASS END=42275922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 42275923 . A . PASS END=42275926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 42275927 . G . PASS END=42275938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:20,0 chr2 42275939 . G . PASS END=42275976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr2 42275977 . A . PASS END=42275979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 42280379 . C . PASS END=42280379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 42280380 . T . PASS END=42280380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,637:0,5,255:19,0 chr2 42280381 . C . PASS END=42280381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 42280382 . T . PASS END=42280382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,680:0,19,255:20,0 chr2 42280383 . A . PASS END=42280384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 42280385 . G . LowGQ END=42280385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,706:14,0,255:20,0 chr2 42280386 . G . PASS END=42280387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,853:0,56,255:23,0 chr2 42280388 . T . PASS END=42280389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 42280390 . C . LowGQ END=42280391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:0:26:0,0,767:0,0,255:23,0 chr2 42280392 . G . PASS END=42280393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,812:0,23,255:22,0 chr2 42280394 . T . PASS END=42280394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:24,0 chr2 42280395 . A . PASS END=42280395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 42280396 . C . PASS END=42280396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,855:0,12,255:24,0 chr2 42280397 . C . PASS END=42280397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr2 42280398 . A . PASS END=42280399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr2 42280400 . G . PASS END=42280400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr2 42280401 . A . PASS END=42280403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 42280404 . G . PASS END=42280404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr2 42280405 . C . PASS END=42280407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr2 42280408 . G . PASS END=42280501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:28:0,80,1011:0,80,255:40,0 chr2 42281176 . A . PASS END=42281182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 42281183 . T . PASS END=42281200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:19,0 chr2 42281201 . T . PASS END=42281222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:25,0 chr2 42281223 . A . PASS END=42281223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr2 42281224 . C . PASS END=42281246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,886:0,75,255:26,0 chr2 42281247 . C . PASS END=42281255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1096:0,90,255:32,0 chr2 42281256 . T . PASS END=42281256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:30,0 chr2 42281257 . C . PASS END=42281278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1149:0,82,255:33,0 chr2 42281279 . G . PASS END=42281280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr2 42281281 . G . PASS END=42281321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1127:0,83,255:34,0 chr2 42281322 . G . PASS END=42281322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr2 42281323 . A . PASS END=42281323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 42281324 . C . PASS END=42281324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 42281325 . G . PASS END=42281331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 42281332 . G . PASS END=42281333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 42281334 . A . PASS END=42281334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr2 42281335 . G . PASS END=42281378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,839:0,61,255:26,0 chr2 42281379 . C . PASS END=42281388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,759:0,47,255:19,0 chr2 42281389 . T . PASS END=42281391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:20:0,39,585:0,60,255:13,0 chr2 42281392 . G . PASS END=42281395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr2 42281396 . A . PASS END=42281397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 42281398 . G . PASS END=42281421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr2 42281422 . A . PASS END=42281422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 42281423 . A . PASS END=42281429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 42281430 . C . PASS END=42281431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 42281432 . T . PASS END=42281436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 42281437 . A . PASS END=42281437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 42281438 . A . PASS END=42281444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr2 42281445 . C . PASS END=42281445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 42281446 . A . PASS END=42281447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 42282081 . G . PASS END=42282160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,105,1575:0,105,255:40,0 chr2 42282426 . G . PASS END=42282525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:38:0,81,1340:0,81,255:40,0 chr2 42282526 . C . PASS END=42282527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:38:0,78,1170:0,81,255:26,0 chr2 42282528 . G . PASS END=42282533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,98,255:29,0 chr2 42284361 . A . PASS END=42284534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:29:0,82,1260:0,82,255:40,0 chr2 42284743 . G . PASS END=42284746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 42284747 . G . PASS END=42284771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:24,0 chr2 42284772 . T . PASS END=42284772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr2 42284773 . G . PASS END=42284778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr2 42284779 . A . PASS END=42284779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 42284780 . A . PASS END=42284814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,892:0,61,255:26,0 chr2 42284815 . A . PASS END=42284815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 42284816 . G . PASS END=42284816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 42284817 . G . PASS END=42284817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 42284818 . C . PASS END=42284823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 42284824 . G . PASS END=42284824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 42284825 . C . PASS END=42284828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 42396752 . A . PASS END=42396759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 42396760 . T . PASS END=42396761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 42396762 . T . PASS END=42396763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 42396764 . G . PASS END=42396764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 42396765 . C . PASS END=42396766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 42396767 . G . PASS END=42396767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 42396768 . G . PASS END=42396771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr2 42396772 . T . PASS END=42396772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,950:0,73,255:28,0 chr2 42396773 . C . PASS END=42396776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 42472645 . A . PASS END=42472647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr2 42472648 . A . PASS END=42472648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 42472649 . T . PASS END=42472823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1141:0,80,255:40,0 chr2 42472824 . A . PASS END=42472827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,76,255:24,0 chr2 42483641 . G . PASS END=42483643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 42483644 . A . PASS END=42483648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 42483649 . A . PASS END=42483649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:28,0 chr2 42483650 . G . PASS END=42483765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1194:0,83,255:40,0 chr2 42483766 . A . PASS END=42483766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 42483767 . A . PASS END=42483770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 42488261 . T . PASS END=42488434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:45:0,114,1710:0,119,255:40,0 chr2 42490318 . C . PASS END=42490446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:72:0,120,1800:0,163,255:40,0 chr2 42491846 . G . PASS END=42491871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:78:0,120,1800:0,224,255:40,0 chr2 42492059 . C . PASS END=42492091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,185,255:40,1 chr2 42507990 . A . PASS END=42508113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:38:0,84,1260:0,87,255:40,0 chr2 42509963 . A . PASS END=42509963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:27,0 chr2 42509964 . T . PASS END=42509964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 42509965 . A . PASS END=42509965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,915:0,67,255:26,0 chr2 42509966 . T . PASS END=42509967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 42509968 . G . PASS END=42509972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:27,0 chr2 42509973 . C . PASS END=42509980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:35,0 chr2 42509981 . G . PASS END=42510017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:87:40:0,87,1431:0,87,255:40,0 chr2 42510018 . A G, 201.61 PASS DP=56;MQ=250.00;MQRankSum=1.669;ReadPosRankSum=0.346;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,54,0:0.982,0.000:55:0,26,0:1,28,0:152:239,155,0,2041,162,2048:255,154,0:1,0:2.0161e+02,1.5161e+02,0.0000e+00,4.5000e+02,1.9336e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,32,22:1,0,28,26 chr2 42510019 . A . PASS END=42510022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 42510023 . A . PASS END=42510023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:63:58:0,63,1621:0,63,255:40,0 chr2 42510024 . G . PASS END=42510055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,119,1800:0,119,255:40,0 chr2 42510056 . T . PASS END=42510069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:56:0,117,1550:0,117,255:40,0 chr2 42510070 . G . PASS END=42510070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,8:56:34:56:0,34,1308:0,34,255:40,0 chr2 42510071 . A . PASS END=42510107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:34:0,81,1215:0,93,255:40,0 chr2 42510108 . A . PASS END=42510112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:30:0,66,990:0,90,255:26,0 chr2 42511774 . C . PASS END=42511843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:60:0,120,1800:0,178,255:40,0 chr2 42513409 . C . PASS END=42513519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1225:0,80,255:40,0 chr2 42515367 . G . PASS END=42515387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,141,255:40,0 chr2 42515388 . A G, 214.62 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,25,0:0,31,0:165:252,168,0,2104,168,2104:255,168,0:0,0:2.1462e+02,1.6462e+02,0.0000e+00,4.5000e+02,1.9939e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,19:0,0,32,24 chr2 42515389 . T . PASS END=42515425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,158,255:40,0 chr2 42515426 . G . PASS END=42515462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,170,255:40,0 chr2 42522265 . A . PASS END=42522399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:97:38:0,97,1358:0,97,255:40,0 chr2 42522521 . A . PASS END=42522656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:95:36:0,95,1319:0,95,255:40,0 chr2 42528381 . G . PASS END=42528399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1300:0,101,255:40,0 chr2 42528400 . A . PASS END=42528400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1237:0,79,255:39,0 chr2 42528401 . C . PASS END=42528532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:91:42:0,91,1524:0,91,255:40,0 chr2 42530244 . G . PASS END=42530369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:61:0,120,1800:0,170,255:40,0 chr2 42530455 . G . PASS END=42530573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:37:0,87,1305:0,95,255:40,0 chr2 42530574 . C . PASS END=42530586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr2 42531624 . G . PASS END=42531691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:30:0,83,1182:0,83,255:40,0 chr2 42543102 . G . PASS END=42543188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,99,1485:0,112,255:40,0 chr2 42543189 . A . PASS END=42543190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:33,0 chr2 42544567 . A . PASS END=42544664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:70:0,120,1800:0,169,255:40,0 chr2 42552607 . G . PASS END=42552660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,135,255:40,0 chr2 42552661 . A . PASS END=42552688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:43:0,81,1215:0,88,255:40,0 chr2 42552689 . T . PASS END=42552694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:60:36:0,60,900:0,107,255:23,0 chr2 42553185 . T . PASS END=42553198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:79:0,120,1800:0,185,255:40,0 chr2 42553294 . G . PASS END=42553367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,114,1710:0,174,255:40,0 chr2 42553368 . T . PASS END=42553368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:50:48:0,50,1590:0,50,255:40,0 chr2 42553369 . G . PASS END=42553392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1201:0,81,255:38,0 chr2 42556026 . G . PASS END=42556156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,101,1388:0,101,255:40,0 chr2 42556874 . G . PASS END=42556880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr2 42556881 . G . PASS END=42556884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:22,0 chr2 42556885 . C . PASS END=42557155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,1008:0,81,255:40,0 chr2 42557156 . T . PASS END=42557156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1092:0,70,255:33,0 chr2 42557157 . C . PASS END=42557214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,102,1452:0,109,255:40,0 chr2 42557215 . C . PASS END=42557215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:33,0 chr2 42557216 . G . PASS END=42557233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:38:0,96,1440:0,114,255:36,0 chr2 42557234 . G . PASS END=42557235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:72:37:0,72,1230:0,72,255:34,0 chr2 42557236 . C . PASS END=42557236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:32,0 chr2 42557237 . A . PASS END=42557237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 42557238 . G . PASS END=42557241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 42557242 . A . PASS END=42557242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 42557243 . G . PASS END=42557335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:40,0 chr2 42557336 . C . PASS END=42557347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr2 42560914 . T . PASS END=42560914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 42560915 . C . PASS END=42560915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr2 42560916 . A . PASS END=42560934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,109,1393:0,109,255:40,0 chr2 42560935 . A . PASS END=42560935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1325:0,76,255:37,0 chr2 42560936 . G . PASS END=42560937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1423:0,109,255:40,0 chr2 42560938 . C . PASS END=42560958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1419:0,107,255:40,0 chr2 42560959 . G . PASS END=42560959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1473:0,79,255:36,0 chr2 42560960 . A . PASS END=42560961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 42560962 . T . PASS END=42560962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1451:0,79,255:35,0 chr2 42560963 . G . PASS END=42560966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:42:0,88,1496:0,88,255:37,0 chr2 42560967 . T . PASS END=42560967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:50:40:0,50,1212:0,50,255:36,0 chr2 42560968 . C . PASS END=42560974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,114,1398:0,114,255:38,0 chr2 42560975 . A G, 50.00 PASS DP=37;MQ=250.00;MQRankSum=5.135;ReadPosRankSum=3.173;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,21,0:0.568,0.000:37:10,10,0:6,11,0:48:85,0,49,686,572,1258:255,0,255:17,0:5.0000e+01,7.2481e-05,5.1737e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,6,15:8,8,11,10 chr2 42560976 . G . PASS END=42561003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,96,255:38,0 chr2 42561004 . T . PASS END=42561004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 42561005 . G . PASS END=42561006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:29:0,55,1047:0,55,255:26,0 chr2 42561007 . T . PASS END=42561007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 42561008 . T . PASS END=42561008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr2 42561009 . C . PASS END=42561009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 42562877 . T . PASS END=42562882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1351:0,97,255:33,0 chr2 42562883 . G . PASS END=42562883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:32,0 chr2 42562884 . C . PASS END=42562885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1263:0,99,255:33,0 chr2 42578359 . T . PASS END=42578374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,843:0,81,255:29,0 chr2 42578375 . T . PASS END=42578375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 42578376 . G . PASS END=42578498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:30:0,81,1066:0,90,255:40,0 chr2 42578499 . T . PASS END=42578499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:26,0 chr2 42580316 . T . PASS END=42580483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:87:35:0,87,1305:0,105,255:40,0 chr2 42588191 . C . PASS END=42588198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:18,0 chr2 42588199 . C . PASS END=42588199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 42588200 . A . PASS END=42588200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 42588201 . T . PASS END=42588211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr2 42588212 . G . PASS END=42588212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr2 42588213 . C . PASS END=42588216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 42588217 . G . PASS END=42588217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 42588218 . C . PASS END=42588218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 42588219 . G . PASS END=42588219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 42588220 . C . PASS END=42588229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr2 42588230 . C . PASS END=42588232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 42588233 . C . PASS END=42588233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 42588234 . G . PASS END=42588254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1039:0,81,255:33,0 chr2 42588255 . C . PASS END=42588255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr2 42588256 . A . PASS END=42588287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:33,0 chr2 42588288 . A . PASS END=42588288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 42588289 . A . PASS END=42588301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1149:0,93,255:31,0 chr2 42596008 . C . PASS END=42596025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,809:0,62,255:26,0 chr2 42596026 . A . PASS END=42596042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,978:0,81,255:32,0 chr2 42596043 . T . PASS END=42596043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:31,0 chr2 42596044 . C . PASS END=42596063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1205:0,96,255:33,0 chr2 42596064 . C . PASS END=42596064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 42596065 . G . PASS END=42596070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:31,0 chr2 42671074 . T . PASS END=42671593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:36:0,85,1226:0,85,255:40,0 chr2 42671594 . G . PASS END=42671594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:35,0 chr2 42671595 . G . PASS END=42671603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1386:0,98,255:38,0 chr2 42671604 . C . PASS END=42671604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr2 42671605 . C . PASS END=42671611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,101,1426:0,101,255:37,0 chr2 42671612 . T . PASS END=42671612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr2 42671613 . C . PASS END=42671624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1341:0,95,255:36,0 chr2 42671625 . G . PASS END=42671625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:34,0 chr2 42671626 . G . PASS END=42671700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1159:0,91,255:40,0 chr2 42671701 . G . PASS END=42671713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,76,255:26,0 chr2 42671714 . A . PASS END=42671714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:23,0 chr2 42671715 . T . PASS END=42671719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 42719977 . C . PASS END=42719977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 42719978 . C . PASS END=42719982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 42719983 . G . PASS END=42719983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 42719984 . G . PASS END=42719990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 42719991 . C . LowGQ END=42719991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr2 42719992 . C . PASS END=42720004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr2 42720005 . A . PASS END=42720005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 42720006 . G . PASS END=42720023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr2 42720024 . C . PASS END=42720024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 42720025 . A . PASS END=42720027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 42720028 . C . PASS END=42720028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 42720029 . T . PASS END=42720031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 42720032 . G . PASS END=42720032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 42720033 . G . PASS END=42720041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 42720042 . G . PASS END=42720044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 42720045 . T . PASS END=42720046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:17:11:0,17,371:0,17,255:9,0 chr2 42720047 . C . PASS END=42720051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 42720052 . C . PASS END=42720062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 42720063 . C . PASS END=42720074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 42720075 . G . PASS END=42720132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:9,0 chr2 42720133 . G . PASS END=42720144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 42720145 . G . PASS END=42720153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,247:0,21,247:7,0 chr2 42720154 . T . PASS END=42720154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 42720155 . C . PASS END=42720156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 42720157 . T . PASS END=42720157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 42720158 . C . PASS END=42720159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 42720160 . A . PASS END=42720163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 42720164 . T . PASS END=42720164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 42720165 . C . PASS END=42720210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,164:6,0 chr2 42720211 . C . PASS END=42720223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr2 42720224 . C . PASS END=42720234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:4:4:0,4,90:0,4,133:5,0 chr2 42720235 . C . PASS END=42720243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 42720244 . C . LowGQ END=42720245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr2 42720246 . C . PASS END=42720246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 42720247 . G . LowGQ END=42720247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr2 42720248 . G . PASS END=42720267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 42720268 . G . PASS END=42720276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 42720277 . T . PASS END=42720285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 42720286 . C . PASS END=42720329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr2 42720330 . C . PASS END=42720330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 42720331 . T . PASS END=42720331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 42720332 . C . PASS END=42720349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 42720350 . T . PASS END=42720356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 42720357 . G . PASS END=42720368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 42720369 . C . PASS END=42720369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 42720370 . T . PASS END=42720372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 42720373 . C . PASS END=42720389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 42720390 . G . PASS END=42720393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 42720394 . A . PASS END=42720408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,349:0,27,255:9,0 chr2 42720409 . C . PASS END=42720421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr2 42720422 . G . PASS END=42720432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 42720433 . A . PASS END=42720448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,488:0,39,255:13,0 chr2 42720449 . G . PASS END=42720470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 42720471 . C . PASS END=42720471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 42720472 . T . PASS END=42720518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,620:0,48,255:19,0 chr2 42720519 . G . PASS END=42720549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:24,0 chr2 42720550 . G . PASS END=42720550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 42720551 . G . PASS END=42720552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 42720553 . A . PASS END=42720553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 42720554 . A . PASS END=42720555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 42720556 . T . PASS END=42720578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:19,0 chr2 42720579 . C . PASS END=42720579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 42720580 . G . PASS END=42720602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,46,255:19,0 chr2 42720603 . C . PASS END=42720604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 42720605 . G . PASS END=42720606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 42720607 . A . PASS END=42720633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:13,0 chr2 42720634 . A . PASS END=42720641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 42795886 . A . PASS END=42795913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:5,0 chr2 42797577 . A . PASS END=42797644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:57:0,93,1395:0,133,255:40,1 chr2 42806247 . A . PASS END=42806321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:45:0,80,1478:0,80,255:40,0 chr2 42806322 . C . PASS END=42806322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1315:0,78,255:38,0 chr2 42806323 . T . PASS END=42806340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1196:0,84,255:35,0 chr2 42836598 . A . PASS END=42836724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,113,1546:0,113,255:40,0 chr2 42867313 . G . PASS END=42867376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:48:0,120,1800:0,126,255:40,0 chr2 42871267 . G . PASS END=42871384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1187:0,81,255:40,0 chr2 42883340 . G . PASS END=42883442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:62:0,120,1800:0,179,255:40,0 chr2 42886903 . T . PASS END=42886904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 42886905 . C . PASS END=42886905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr2 42886906 . T . PASS END=42886914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 42886915 . A . PASS END=42886915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:25,0 chr2 42886916 . T . PASS END=42886923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:28,0 chr2 42886924 . A . PASS END=42886924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr2 42886925 . G . PASS END=42886973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1141:0,80,255:35,0 chr2 42886974 . C . PASS END=42886991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:25,0 chr2 42886992 . A . PASS END=42886992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:22,0 chr2 42886993 . C . PASS END=42887002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 42909541 . T . PASS END=42909547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr2 42909548 . C . PASS END=42909551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,784:0,63,255:26,0 chr2 42909552 . G . PASS END=42909552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 42909553 . G . PASS END=42909553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 42909554 . A . PASS END=42909554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:27,0 chr2 42909555 . T . PASS END=42909717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:28:0,84,1070:0,84,255:40,0 chr2 42909718 . C . PASS END=42909718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1510:0,74,255:33,0 chr2 42909719 . G . PASS END=42909722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:41:0,85,1482:0,85,255:36,0 chr2 42909723 . A . PASS END=42909723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr2 42909724 . G . PASS END=42909724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 42909725 . A . PASS END=42909725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:26:40:0,26,1218:0,26,255:35,0 chr2 42909726 . T . PASS END=42909726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1388:0,51,255:36,0 chr2 42909727 . T . PASS END=42909729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1169:0,75,255:35,0 chr2 42922905 . C . PASS END=42922939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:83:0,120,1800:0,242,255:40,1 chr2 42922940 . T . PASS END=42922979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:94:0,120,1800:0,255,255:40,0 chr2 42924916 . A . PASS END=42924974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,4:96:99:71:0,120,1800:0,200,255:40,0 chr2 42925555 . G . PASS END=42925555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 42931334 . C . PASS END=42931334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 42931335 . A . PASS END=42931335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 42931336 . G . PASS END=42931336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 42931337 . C . PASS END=42931458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:30:0,88,1131:0,88,255:40,0 chr2 42935043 . C . PASS END=42935047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 42935048 . C . PASS END=42935194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:80:27:0,80,987:0,80,255:40,0 chr2 42936014 . G . PASS END=42936016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:18,0 chr2 42936017 . C . PASS END=42936033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:19,0 chr2 42936034 . C . PASS END=42936037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr2 42936038 . T . PASS END=42936038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 42936039 . C . PASS END=42936046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,845:0,66,255:25,0 chr2 42936047 . G . PASS END=42936108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1055:0,84,255:35,0 chr2 42936109 . A . PASS END=42936109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1207:0,75,255:33,0 chr2 42936110 . G . PASS END=42936157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1247:0,89,255:35,0 chr2 42936158 . T . PASS END=42936158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1063:0,41,255:27,0 chr2 42936159 . G . PASS END=42936161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 42936162 . A . PASS END=42936162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 42936163 . A . PASS END=42936166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 42936167 . A . PASS END=42936183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,961:0,65,255:26,0 chr2 42936184 . G . PASS END=42936185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 42936186 . C . PASS END=42936190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:20,0 chr2 42936191 . A . PASS END=42936193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:50:26:0,50,803:0,50,255:19,0 chr2 42936194 . C . PASS END=42936194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,68,255:19,0 chr2 42936195 . G . PASS END=42936214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,52,255:19,0 chr2 42936215 . T . PASS END=42936215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:17,0 chr2 42936216 . A . PASS END=42936216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 42936217 . T . PASS END=42936217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:15,0 chr2 42936218 . G . PASS END=42936218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,537:0,15,255:16,0 chr2 42936219 . C . PASS END=42936219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 42936220 . T . PASS END=42936221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr2 42936222 . C . PASS END=42936226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 42936227 . A . PASS END=42936227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:13,0 chr2 42936228 . G . PASS END=42936230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 42936231 . C . PASS END=42936235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 42936236 . T . PASS END=42936236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 42936237 . G . PASS END=42936237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 42936238 . T . PASS END=42936241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 42936242 . A . PASS END=42936242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,435:0,11,255:13,0 chr2 42936243 . T . PASS END=42936253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,458:0,42,255:14,0 chr2 42936254 . T . PASS END=42936254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr2 42936255 . C . PASS END=42936256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,468:0,42,255:15,0 chr2 42936257 . T . PASS END=42936257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:13,0 chr2 42936258 . A . PASS END=42936259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 42946128 . A . PASS END=42946214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,114,1710:0,125,255:40,0 chr2 42950029 . A . PASS END=42950175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:96:37:0,96,1440:0,102,255:40,1 chr2 42979374 . A . PASS END=42979374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 42979375 . A . PASS END=42979375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 42979376 . A . PASS END=42979390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr2 42980514 . A . PASS END=42980539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,118,1798:0,118,255:40,0 chr2 42990048 . T . PASS END=42990052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr2 42990053 . C . PASS END=42990084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 42990085 . T . PASS END=42990086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 42990087 . G . PASS END=42990091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 42990092 . G . PASS END=42990092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 42990093 . C . PASS END=42990101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr2 42990102 . C . PASS END=42990102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 42990103 . T . PASS END=42990108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 42990109 . A . PASS END=42990109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr2 42990110 . T . PASS END=42990118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 42990119 . C . PASS END=42990123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 42990124 . C . PASS END=42990130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 42990131 . C . PASS END=42990131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 42990132 . C . PASS END=42990158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:16,0 chr2 42990159 . T . PASS END=42990159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:13,0 chr2 42990160 . T . PASS END=42990169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 42990170 . T . PASS END=42990170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 42990171 . C . PASS END=42990200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,552:0,48,255:17,0 chr2 42990201 . C . PASS END=42990235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr2 42990236 . A . PASS END=42990236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 42990237 . G . PASS END=42990239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 42990240 . G . PASS END=42990241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 42990242 . G . PASS END=42990266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,747:0,63,255:24,0 chr2 42990267 . G . PASS END=42990298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1086:0,84,255:30,0 chr2 42990299 . G . PASS END=42990299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:27,0 chr2 42990300 . G . PASS END=42990315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1039:0,84,255:30,0 chr2 42990316 . T . PASS END=42990336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:23:0,69,869:0,69,255:26,0 chr2 42990337 . C . PASS END=42990337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 42990338 . G . PASS END=42990354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:24,0 chr2 42990355 . A . PASS END=42990355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:21,0 chr2 42990356 . A . PASS END=42990362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 42990363 . C . PASS END=42990363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 42990364 . A . PASS END=42990367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 42990368 . A . PASS END=42990368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 42990369 . A . PASS END=42990378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 42990379 . A . PASS END=42990380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr2 42990381 . G . PASS END=42990381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 42990382 . A . PASS END=42990382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 42990383 . T . PASS END=42990396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 42990397 . A . PASS END=42990397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:21,0 chr2 42990398 . A . PASS END=42990402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 42990403 . A . PASS END=42990416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:19,0 chr2 42990417 . C . PASS END=42990417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr2 42990418 . A . PASS END=42990432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:16,0 chr2 42990433 . A . PASS END=42990435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 42990436 . C . PASS END=42990442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 42990443 . C . PASS END=42990449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 42990450 . C . PASS END=42990450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr2 42990451 . G . PASS END=42990458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 42990459 . C . PASS END=42990459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 42990460 . T . PASS END=42990474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 42990475 . C . PASS END=42990508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr2 42990509 . C . PASS END=42990512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 42990513 . G . PASS END=42990561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,388:0,33,255:13,0 chr2 42990562 . T . PASS END=42990572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 42990573 . C . PASS END=42990584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 42990585 . C . PASS END=42990586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 42990587 . T . PASS END=42990595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 42990596 . C . PASS END=42990599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 42990600 . G . PASS END=42990600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 42990601 . T . PASS END=42990642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 42990643 . T . PASS END=42990663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 42990664 . C . PASS END=42990666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 42990667 . A . PASS END=42990667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 42990668 . C . PASS END=42990673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 42990674 . G . PASS END=42990675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 42990676 . C . PASS END=42990713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,598:0,45,255:16,0 chr2 42990714 . G . PASS END=42990729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,922:0,72,255:26,0 chr2 42990730 . G . PASS END=42990732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 42990733 . T . PASS END=42990733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr2 42990734 . G . PASS END=42990829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,980:0,81,255:39,0 chr2 42990830 . C . PASS END=42990830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:34,0 chr2 42990831 . A . PASS END=42990877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1158:0,85,255:35,0 chr2 42990878 . G . PASS END=42990878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr2 42990879 . G . PASS END=42990879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 42990880 . A . PASS END=42990881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1078:0,63,255:27,0 chr2 42990882 . G . PASS END=42990910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1101:0,80,255:34,0 chr2 42990911 . C . PASS END=42990911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1193:0,55,255:30,0 chr2 42990912 . G . PASS END=42990923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1274:0,91,255:33,0 chr2 42990924 . G . PASS END=42990924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:30,0 chr2 42990925 . A . PASS END=42990950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1201:0,86,255:33,0 chr2 42990951 . G . PASS END=42990951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 42990952 . G . PASS END=42990954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 42990955 . C . PASS END=42990955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:25,0 chr2 42990956 . G . PASS END=42990956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:26,0 chr2 42990957 . C . PASS END=42990972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1064:0,87,255:30,0 chr2 42990973 . A . PASS END=42990973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 42990974 . T . PASS END=42990985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:31:0,85,1127:0,85,255:32,0 chr2 42990986 . A . PASS END=42990986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1052:0,68,255:29,0 chr2 42990987 . A . PASS END=42990989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1050:0,90,255:30,0 chr2 42990990 . G . PASS END=42990991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr2 42990992 . T . PASS END=42990996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 42990997 . A . PASS END=42990997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 42990998 . C . PASS END=42991006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 42991007 . G . PASS END=42991007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr2 42991008 . G . PASS END=42991008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 42991009 . A . PASS END=42991012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 42991013 . A . PASS END=42991013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,861:0,73,255:27,0 chr2 42991014 . C . PASS END=42991023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:32:0,85,1158:0,85,255:32,0 chr2 42991024 . A . PASS END=42991024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:29,0 chr2 42991025 . G . PASS END=42991045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1172:0,85,255:33,0 chr2 42991046 . A . PASS END=42991046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1098:0,63,255:27,0 chr2 42991047 . C . PASS END=42991065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 42991066 . G . PASS END=42991066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 42991067 . G . PASS END=42991069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 42991070 . G . PASS END=42991070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1019:0,59,255:28,0 chr2 42991071 . G . PASS END=42991077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr2 42991078 . C . PASS END=42991078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 42991079 . C . PASS END=42991089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:34:0,83,1303:0,83,255:33,0 chr2 42991090 . C . PASS END=42991090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1142:0,71,255:30,0 chr2 42991091 . C . PASS END=42991098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1150:0,85,255:32,0 chr2 42991099 . G . PASS END=42991099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:29,0 chr2 42991100 . T . PASS END=42991111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:33:0,81,1149:0,81,255:36,0 chr2 42991112 . A . PASS END=42991112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:35,0 chr2 42991113 . G . PASS END=42991232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:34:0,80,1135:0,80,255:40,0 chr2 42991233 . G . PASS END=42991233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:31,0 chr2 42991234 . T . PASS END=42991241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:33,0 chr2 42991242 . T . PASS END=42991242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1111:0,71,255:30,0 chr2 42991243 . C . PASS END=42991280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1127:0,82,255:34,0 chr2 42991281 . G . PASS END=42991281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr2 42991282 . A . PASS END=42991289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 42991290 . T . PASS END=42991307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,64,255:26,0 chr2 42991308 . G . PASS END=42991315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr2 42991316 . A . PASS END=42991318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 42991319 . T . PASS END=42991319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 42994577 . T . PASS END=42994579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr2 42994580 . C . PASS END=42994585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 42994586 . G . PASS END=42994586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 42994587 . G . PASS END=42994592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,971:0,84,255:29,0 chr2 42994593 . T . PASS END=42994593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:27,0 chr2 42994594 . T . PASS END=42994596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1096:0,90,255:30,0 chr2 42994597 . A . PASS END=42994597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 42994598 . G . PASS END=42994600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 42994601 . A . PASS END=42994601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 42994602 . G . PASS END=42994608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 42994609 . G . PASS END=42994610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 42994611 . G . PASS END=42994616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 42994617 . G . PASS END=42994621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:30:0,72,1080:0,80,255:26,0 chr2 42994622 . G . PASS END=42994627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 42994628 . A . PASS END=42994655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1000:0,68,255:26,0 chr2 42994735 . G . PASS END=42994838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1145:0,80,255:38,0 chr2 42994839 . A . PASS END=42994839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 42994840 . T . PASS END=42994848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 42994849 . G . PASS END=42994850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 42994851 . C . PASS END=42994859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 42994860 . C . PASS END=42994860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 42994861 . T . PASS END=42994862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 42994863 . A . PASS END=42994865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr2 42994866 . A . PASS END=42994866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr2 42994867 . C . PASS END=42994867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 42994868 . C . PASS END=42994889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 42994890 . C . PASS END=42994890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:22,0 chr2 42994891 . T . PASS END=42994898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 42994899 . A . PASS END=42994901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 42994902 . G . PASS END=42994930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:25,0 chr2 42994931 . C . PASS END=42994932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 42994933 . G . PASS END=42994959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:25,0 chr2 42994960 . G . PASS END=42994974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr2 42994975 . A . PASS END=42994975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 42994976 . A . PASS END=42994990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1172:0,87,255:31,0 chr2 42994991 . C . PASS END=42994991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 42994992 . C . PASS END=42995015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1213:0,88,255:35,0 chr2 42995016 . A . PASS END=42995016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 42995017 . C . PASS END=42995021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1288:0,92,255:35,0 chr2 42995022 . A . PASS END=42995022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:32,0 chr2 42995023 . C . PASS END=42995057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1296:0,92,255:36,0 chr2 42995058 . T . PASS END=42995058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:31,0 chr2 42995059 . A . PASS END=42995063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:32,0 chr2 42995064 . A . PASS END=42995065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,1137:0,66,255:30,0 chr2 42995066 . C . PASS END=42995068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 42996851 . A . PASS END=42996873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:18,0 chr2 42996874 . A . PASS END=42996874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 42996875 . A . PASS END=42996885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,652:0,44,255:19,0 chr2 42996886 . T . PASS END=42996892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 42996893 . C . PASS END=42996893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 42996894 . C . PASS END=42996902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,823:0,66,255:26,0 chr2 42996903 . G . PASS END=42996905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 42996906 . C . PASS END=42996909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 42996910 . G . PASS END=42996911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 42996912 . G . PASS END=42996921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 42996922 . C . PASS END=42996922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr2 42996923 . A . PASS END=42996930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 42996931 . A . PASS END=42996932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 42996933 . C . PASS END=42996933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 42996934 . C . PASS END=42996945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 42996946 . C . PASS END=42996963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,886:0,64,255:26,0 chr2 42996964 . G . PASS END=42996964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:23,0 chr2 42996965 . C . PASS END=42996975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,892:0,61,255:24,0 chr2 42996976 . T . PASS END=42996976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,784:0,42,255:20,0 chr2 42996977 . G . PASS END=42996981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 42996982 . C . PASS END=42996982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 42996983 . T . PASS END=42996987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 42996988 . G . PASS END=42996989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:21,0 chr2 42996990 . G . PASS END=42996998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 42997283 . C . PASS END=42997294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:33,0 chr2 42997295 . T . PASS END=42997295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:36,0 chr2 42997296 . T . PASS END=42997326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,102,1374:0,111,255:39,0 chr2 42997633 . T . PASS END=42997651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1390:0,114,255:38,0 chr2 42997652 . A . PASS END=42997705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,99,1237:0,100,255:39,0 chr2 42997706 . T . PASS END=42997706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:31,0 chr2 42997707 . G . PASS END=42997716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:31,0 chr2 42997717 . T . PASS END=42997722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr2 43010454 . C . PASS END=43010460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,705:0,47,255:19,0 chr2 43010461 . C . PASS END=43010481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr2 43010482 . G . PASS END=43010489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 43010490 . T . PASS END=43010501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 43010502 . C . PASS END=43010509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr2 43010510 . G . PASS END=43010522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 43010523 . T . PASS END=43010523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr2 43010524 . G . PASS END=43010548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 43010549 . C . PASS END=43010549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr2 43010550 . A . PASS END=43010560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 43010923 . C . PASS END=43011004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1103:0,80,255:34,0 chr2 43011005 . T . PASS END=43011007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 43015669 . C . PASS END=43015703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:41:0,83,1467:0,83,255:40,0 chr2 43015704 . T A, 50.00 PASS DP=46;MQ=249.98;MQRankSum=5.211;ReadPosRankSum=0.614;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,29,0:0.630,0.000:46:10,16,0:7,13,0:45:85,0,44,979,608,1586:255,0,255:17,0:5.0000e+01,1.2374e-04,4.7337e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,16,13:6,11,15,14 chr2 43015705 . G . PASS END=43015718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:43:0,93,1561:0,93,255:40,0 chr2 43015719 . T C, 179.42 PASS DP=44;MQ=249.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,26,0:0,18,0:129:217,132,0,1698,132,1698:255,132,0:0,0:1.7942e+02,1.2942e+02,0.0000e+00,4.5000e+02,1.6419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,25:0,0,23,21 chr2 43015720 . G . PASS END=43015747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,108,1576:0,116,255:40,0 chr2 43019597 . A . PASS END=43019670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1099:0,84,255:38,0 chr2 43019671 . C . PASS END=43019676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,88,255:24,0 chr2 43294871 . T . PASS END=43294880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 43294881 . T . PASS END=43294882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 43294883 . G . PASS END=43294889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,178:5,0 chr2 43294890 . C . PASS END=43294898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 43294899 . T . PASS END=43294914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr2 43294915 . A . PASS END=43294915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 43294916 . A . PASS END=43294925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 43294926 . A . PASS END=43294958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 43294959 . C . PASS END=43294979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 43294980 . A . PASS END=43294989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 43294990 . T . PASS END=43295006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:9,0 chr2 43295007 . C . PASS END=43295014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr2 43295015 . G . PASS END=43295028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 43295029 . C . PASS END=43295030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 43295031 . G . PASS END=43295031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 43295032 . G . PASS END=43295032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:13,0 chr2 43295033 . C . PASS END=43295037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 43295038 . C . PASS END=43295038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 43295039 . C . PASS END=43295039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 43295040 . C . PASS END=43295040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 43295041 . C . PASS END=43295041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 43295042 . C . PASS END=43295042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 43295043 . G . PASS END=43295054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr2 43295055 . G . PASS END=43295055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 43295056 . C . PASS END=43295056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:19,0 chr2 43295057 . C . PASS END=43295068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:22,0 chr2 43295069 . G . PASS END=43295069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 43295070 . A . PASS END=43295076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,844:0,69,255:26,0 chr2 43295077 . G . PASS END=43295096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,996:0,84,255:29,0 chr2 43295097 . A . PASS END=43295097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 43295098 . G . PASS END=43295104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:33,0 chr2 43295105 . A . PASS END=43295105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 43295106 . G . PASS END=43295106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 43295107 . A . PASS END=43295107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:32,0 chr2 43295108 . G . PASS END=43295175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:94:37:0,94,1169:0,94,255:40,0 chr2 43295176 . G . PASS END=43295176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1320:0,68,255:40,0 chr2 43295177 . G . PASS END=43295256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:34:0,81,1215:0,86,255:40,0 chr2 43295257 . A . PASS END=43295257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 43295258 . A . PASS END=43295258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:23,0 chr2 43295259 . G . PASS END=43295276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,953:0,62,255:24,0 chr2 43295277 . A . PASS END=43295277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 43295278 . G . PASS END=43295278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 43295279 . C . PASS END=43295298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:19:0,44,690:0,44,255:21,0 chr2 43295299 . A . PASS END=43295299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:17,0 chr2 43295300 . G . PASS END=43295308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 43295309 . A . PASS END=43295309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 43295310 . G . PASS END=43295312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 43295313 . C . PASS END=43295316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 43295317 . G . PASS END=43295324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:14,0 chr2 43295325 . G . PASS END=43295332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 43295333 . G . PASS END=43295333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 43295334 . T . PASS END=43295338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 43295339 . G . PASS END=43295351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 43295352 . G . PASS END=43295352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 43295353 . G . PASS END=43295354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr2 43295355 . C . PASS END=43295355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 43295356 . T . PASS END=43295380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,446:0,42,255:16,0 chr2 43295381 . T . PASS END=43295381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:15,0 chr2 43295382 . G . PASS END=43295401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr2 43295402 . C . PASS END=43295402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr2 43295403 . G . PASS END=43295431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,590:0,40,255:19,0 chr2 43295432 . G . PASS END=43295434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,762:0,63,255:21,0 chr2 43295435 . G . PASS END=43295436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 43295437 . G . PASS END=43295438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 43295439 . G . PASS END=43295439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 43295440 . C . PASS END=43295445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 43295446 . G . PASS END=43295450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 43295451 . G . PASS END=43295452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 43295453 . G . PASS END=43295455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 43295456 . G . PASS END=43295480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:22,0 chr2 43295481 . C . PASS END=43295481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr2 43295482 . T . PASS END=43295502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,765:0,61,255:26,0 chr2 43295503 . G . PASS END=43295529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:27:0,80,1008:0,80,255:29,0 chr2 43295530 . C . PASS END=43295530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 43295531 . C . PASS END=43295542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 43295543 . G . PASS END=43295543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 43295544 . A . PASS END=43295551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 43295552 . C . PASS END=43295589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr2 43295590 . G . PASS END=43295590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 43295591 . C . PASS END=43295591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 43295592 . C . PASS END=43295626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr2 43295627 . A G, 46.70 PASS DP=24;MQ=250.00;MQRankSum=3.995;ReadPosRankSum=2.624;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:8,3,0:7,6,0:46:81,0,50,314,536,850:247,0,255:14,0:4.6704e+01,1.1442e-04,5.3000e+01,3.1385e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,5,4:7,8,3,6 chr2 43295628 . G . PASS END=43295651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 43295652 . A . PASS END=43295664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:21:0,48,720:0,56,255:19,0 chr2 43295665 . C . PASS END=43295672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,53,255:18,0 chr2 43295673 . G . PASS END=43295675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 43295676 . C . PASS END=43295691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 43295692 . G . PASS END=43295692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,627:0,27,255:17,0 chr2 43295693 . A . PASS END=43295697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 43295698 . A . PASS END=43295704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,0 chr2 43295705 . G . PASS END=43295705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 43295706 . A . PASS END=43295715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,779:0,66,255:24,0 chr2 43295716 . A . PASS END=43295716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr2 43295717 . G . PASS END=43295719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr2 43295720 . A . PASS END=43295720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr2 43295721 . A . PASS END=43295721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:23,0 chr2 43295722 . G . PASS END=43295724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,811:0,72,255:24,0 chr2 43295725 . G . PASS END=43295725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr2 43295726 . A . PASS END=43295726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 43295727 . G . PASS END=43295727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:21,0 chr2 43295728 . A . PASS END=43295729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 43295730 . A . PASS END=43295745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,731:0,63,255:21,0 chr2 43295746 . G . PASS END=43295746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 43295747 . C . PASS END=43295747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 43295748 . T . PASS END=43295748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 43295749 . G . PASS END=43295751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 43295752 . C . PASS END=43295773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,660:0,43,255:19,0 chr2 43295774 . C . PASS END=43295774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,0 chr2 43295775 . T . PASS END=43295790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr2 43295791 . T . PASS END=43295791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:15,0 chr2 43451458 . T . PASS END=43451479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr2 43451480 . C . PASS END=43451503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr2 43451504 . C . PASS END=43451504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 43451505 . C . PASS END=43451547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:13,0 chr2 43451548 . G . PASS END=43451550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr2 43451551 . C . PASS END=43451551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 43451552 . A . PASS END=43451601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:17,0 chr2 43451602 . G . PASS END=43451620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 43451621 . G . PASS END=43451626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 43451627 . T . PASS END=43451628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 43451629 . G . PASS END=43451629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,396:0,8,255:9,0 chr2 43451630 . G . PASS END=43451648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr2 43451649 . G . PASS END=43451649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 43451650 . G . PASS END=43451650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 43451651 . A . PASS END=43451665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr2 43451666 . G . PASS END=43451683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,210:6,0 chr2 43451684 . C . PASS END=43451692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:6:6:0,6,90:0,18,233:3,0 chr2 43451693 . A . PASS END=43451738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,86:3,0 chr2 43451739 . CCTG C, 3.01 DRAGENIndelHardQUAL DP=5;MQ=250.00;MQRankSum=1.231;ReadPosRankSum=0.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,2,0:0.400,0.000:5:2,1,0:1,1,0:3:15,0,44,24,83,107:62,0,101:3,4:3.0105e+00,3.0103e+00,5.0268e+01,4.6800e+01,1.2096e+02,1.3298e+02:0.00,15.00,18.00,34.77,49.77,37.77:0,3,2,0:1,2,1,1 chr2 43451740 . C . LowGQ END=43451743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,4:7:0:5:0,0,0:54,0,93:5,4 chr2 43451744 . T . PASS END=43451750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr2 43451751 . G . PASS END=43451789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 43451790 . C . PASS END=43451842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,197:0,21,197:8,0 chr2 43451843 . G . PASS END=43451852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 43451853 . C . PASS END=43451854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 43451855 . A . PASS END=43451869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,155:0,12,155:4,0 chr2 43451870 . C . PASS END=43451906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:3:0,3,45:0,9,116:3,0 chr2 43451907 . G . PASS END=43451930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr2 43451931 . C . PASS END=43451931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 43451932 . G . PASS END=43451932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 43451933 . G . PASS END=43451935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 43451936 . C . PASS END=43451936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 43451937 . C . PASS END=43451937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 43451938 . G . LowGQ END=43451938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:1,0,255:8,0 chr2 43451939 . T . PASS END=43451940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 43451941 . C . PASS END=43451941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 43451942 . A . PASS END=43451948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:10,0 chr2 43451949 . C . PASS END=43451949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 43451950 . G . PASS END=43451953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 43451954 . G . PASS END=43451954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:9,0 chr2 43451955 . C . PASS END=43451955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr2 43451956 . A . PASS END=43451957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 43451958 . C . PASS END=43451958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 43451959 . C . PASS END=43451959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 43451960 . G . PASS END=43451960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 43451961 . C . PASS END=43451961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 43451962 . G . PASS END=43451991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:13,0 chr2 43451992 . G . PASS END=43452019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,529:0,42,255:19,0 chr2 43452020 . G . PASS END=43452020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 43452021 . A . PASS END=43452033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 43452034 . G . PASS END=43452035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 43452036 . C . PASS END=43452036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:19,0 chr2 43452037 . G . PASS END=43452037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 43452038 . G . PASS END=43452072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,643:0,40,255:19,0 chr2 43452073 . C . PASS END=43452073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 43452074 . G . PASS END=43452078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 43452079 . C . PASS END=43452084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 43452085 . G . PASS END=43452139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,668:0,41,255:19,0 chr2 43452140 . T . PASS END=43452140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:13,0 chr2 43452141 . G . PASS END=43452141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 43452142 . G . PASS END=43452142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 43452143 . T . PASS END=43452145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 43452146 . C . PASS END=43452153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:15,0 chr2 43452154 . G . PASS END=43452154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 43452155 . A . PASS END=43452163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr2 43452164 . A . PASS END=43452171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 43452172 . G . PASS END=43452173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,519:0,9,255:12,0 chr2 43452174 . T . PASS END=43452174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 43452175 . G . PASS END=43452176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 43452177 . G . PASS END=43452178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 43452179 . T . PASS END=43452182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 43452183 . A G, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=0.551;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,10,0:0.667,0.000:15:2,6,0:3,4,0:47:85,0,46,329,150,479:255,0,127:5,0:5.0000e+01,9.6556e-05,4.9118e+01,3.2879e+02,1.8478e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,5,5:4,1,7,3 chr2 43452184 . C . PASS END=43452187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 43452188 . G . PASS END=43452196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 43452197 . T . PASS END=43452197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 43452198 . C . PASS END=43452198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 43452199 . C . PASS END=43452199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 43452200 . C . PASS END=43452200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 43452201 . G . PASS END=43452201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 43452202 . C . PASS END=43452202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:11,0 chr2 43452203 . G . PASS END=43452205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 43452206 . A . PASS END=43452206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:9,0 chr2 43452207 . A . PASS END=43452209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr2 43452210 . C . PASS END=43452210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:10,0 chr2 43452211 . C . PASS END=43452211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 43452212 . A . PASS END=43452212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:8,0 chr2 43452213 . G . PASS END=43452218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 43452219 . A . PASS END=43452219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:11,0 chr2 43452220 . C . PASS END=43452220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 43452221 . G . PASS END=43452222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 43452223 . A . PASS END=43452223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 43452224 . T . PASS END=43452226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 43452227 . C . LowGQ END=43452227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr2 43452228 . G . PASS END=43452238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 43452239 . G . PASS END=43452245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 43452246 . G . PASS END=43452248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 43452249 . C . PASS END=43452249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 43452250 . C . PASS END=43452254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 43452255 . A . PASS END=43452255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 43452256 . G . PASS END=43452258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr2 43452259 . G . PASS END=43452259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 43452260 . C . PASS END=43452274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 43452275 . G . PASS END=43452276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 43452277 . C . PASS END=43452283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 43452284 . T . PASS END=43452284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 43452285 . C . PASS END=43452292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 43452293 . T . PASS END=43452293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 43452294 . T . PASS END=43452294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 43452295 . G . PASS END=43452298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 43452299 . A . PASS END=43452299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 43452300 . T . PASS END=43452361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,493:0,40,255:19,0 chr2 43452362 . G . PASS END=43452377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 43452378 . G . PASS END=43452378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 43452379 . G . PASS END=43452383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 43452384 . T . PASS END=43452384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 43452385 . C . PASS END=43452393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 43452394 . C . PASS END=43452398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 43452399 . C . PASS END=43452401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 43452402 . G . PASS END=43452449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr2 43452450 . T . PASS END=43452450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 43452451 . C . PASS END=43452458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr2 43452459 . A . PASS END=43452460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 43452461 . G . PASS END=43452462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 43452463 . C . PASS END=43452466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:18:0,36,540:0,54,255:12,0 chr2 43452467 . C . PASS END=43452473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 43452474 . C . PASS END=43452486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:12,0 chr2 43452487 . C . PASS END=43452490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 43452491 . G . PASS END=43452500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 43452501 . G . PASS END=43452501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 43452502 . G . PASS END=43452531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 43452532 . C . PASS END=43452533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 43452534 . G . PASS END=43452536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 43452537 . G . PASS END=43452562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,45,255:15,0 chr2 43452563 . T . PASS END=43452563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 43452564 . T . PASS END=43452596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,511:0,40,255:19,0 chr2 43452597 . C . PASS END=43452599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 43452600 . T . PASS END=43452621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr2 43452622 . G . PASS END=43452622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr2 43452623 . C . PASS END=43452624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 43452625 . C . PASS END=43452639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,629:0,43,255:19,0 chr2 43452640 . A . PASS END=43452640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,568:0,27,255:16,0 chr2 43452641 . A . PASS END=43452664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,609:0,41,255:19,0 chr2 43452665 . C . PASS END=43452666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 43452667 . G . PASS END=43452674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 43452675 . C . PASS END=43452675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:17,0 chr2 43452676 . G . PASS END=43452677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:18,0 chr2 43452678 . T . PASS END=43452678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:17,0 chr2 43452679 . G . PASS END=43452679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 43452680 . C . PASS END=43452683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 43452684 . A . PASS END=43452690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,684:0,46,255:19,0 chr2 43452691 . G . PASS END=43452696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:21,0 chr2 43452697 . A . PASS END=43452697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 43452698 . G . PASS END=43452701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 43452702 . C . PASS END=43452702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 43452703 . G . PASS END=43452705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr2 43452706 . C . PASS END=43452708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 43452709 . G . PASS END=43452710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 43452711 . A . PASS END=43452711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr2 43452712 . C . PASS END=43452712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 43452713 . T . PASS END=43452713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr2 43452714 . T . PASS END=43452724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 43452725 . C . PASS END=43452725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 43452726 . T . PASS END=43452742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 43452743 . G . PASS END=43452743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:22,0 chr2 43452744 . G . PASS END=43452746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 43452747 . G . PASS END=43452747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:22,0 chr2 43452748 . G . PASS END=43452760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,917:0,75,255:25,0 chr2 43452761 . A . PASS END=43452761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 43452762 . G . PASS END=43452789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,856:0,72,255:24,0 chr2 43452790 . T . PASS END=43452790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 43452791 . C . PASS END=43452807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,762:0,66,255:23,0 chr2 43452808 . G . PASS END=43452808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 43452809 . C . PASS END=43452825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr2 43452826 . A . PASS END=43452826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:22,0 chr2 43452827 . G . PASS END=43452839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 43452840 . C . PASS END=43452840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 43452841 . C . PASS END=43452850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,779:0,72,255:24,0 chr2 43452851 . A . PASS END=43452851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:22,0 chr2 43452852 . G . PASS END=43452852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 43452853 . C . PASS END=43452853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 43452854 . A . PASS END=43452861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,914:0,72,255:24,0 chr2 43452862 . C . PASS END=43452872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:19,0 chr2 43452873 . T . PASS END=43452873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:15,0 chr2 43452874 . G . PASS END=43452877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:16,0 chr2 43452878 . A . PASS END=43452891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:13:0,31,495:0,31,255:13,0 chr2 43453404 . C . PASS END=43453404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 43453405 . T . PASS END=43453405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr2 43453406 . T . PASS END=43453406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 43453407 . G . PASS END=43453410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 43453411 . A . PASS END=43453411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 43453412 . A . PASS END=43453419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,825:0,61,255:26,0 chr2 43453420 . A . PASS END=43453421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 43453422 . A . PASS END=43453454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr2 43458087 . T . PASS END=43458444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:28:0,81,1096:0,81,255:40,0 chr2 43458445 . T . PASS END=43458445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1012:0,68,255:31,0 chr2 43458446 . T . PASS END=43458462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1172:0,83,255:32,0 chr2 43458463 . A . PASS END=43458477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,64,255:25,0 chr2 43458478 . T . PASS END=43458478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 43458479 . C . PASS END=43458482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 43459852 . C . PASS END=43459861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 43459862 . C . PASS END=43459910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:17,0 chr2 43459911 . G . PASS END=43459911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:16,0 chr2 43459912 . C . PASS END=43460004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,596:0,48,255:19,0 chr2 43460005 . C . PASS END=43460012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 43460013 . A . PASS END=43460013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 43460014 . G . PASS END=43460021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr2 43506904 . C . PASS END=43507011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:36:0,84,1260:0,84,255:40,0 chr2 43507012 . A . PASS END=43507016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:30:0,72,1080:0,90,255:26,0 chr2 43507017 . G . PASS END=43507019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 43507020 . A . PASS END=43507035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:22,0 chr2 43514047 . C . PASS END=43514050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:25,0 chr2 43514051 . A . PASS END=43514051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,850:0,42,255:24,0 chr2 43514052 . A . PASS END=43514056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,893:0,64,255:26,0 chr2 43514057 . A . PASS END=43514057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 43514058 . T . PASS END=43514060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr2 43514061 . G . PASS END=43514073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:28,0 chr2 43514074 . A . PASS END=43514074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 43514075 . A . PASS END=43514075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 43514076 . A . PASS END=43514193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1063:0,84,255:40,0 chr2 43514194 . C . PASS END=43514194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:28,0 chr2 43514195 . C . PASS END=43514200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 43518835 . C . PASS END=43518907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:42:0,91,1329:0,91,255:40,0 chr2 43519243 . C . PASS END=43519361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:35:0,84,1234:0,84,255:40,0 chr2 43519973 . C . PASS END=43519973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:31,0 chr2 43519974 . T . PASS END=43520193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:32:0,87,1084:0,91,255:40,0 chr2 43520194 . T . PASS END=43520194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr2 43520195 . G . PASS END=43520272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1117:0,89,255:35,0 chr2 43520273 . G . PASS END=43520294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr2 43520295 . A . PASS END=43520295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:23,0 chr2 43520296 . G . PASS END=43520306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 43520307 . G . PASS END=43520307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 43520308 . A . PASS END=43520308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:18,0 chr2 43520309 . G . PASS END=43520331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,643:0,51,255:19,0 chr2 43520332 . A . PASS END=43520332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 43520333 . G . PASS END=43520335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr2 43520336 . G . PASS END=43520336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 43520337 . C . PASS END=43520348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:18,0 chr2 43520349 . A . PASS END=43520349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:13,0 chr2 43520350 . G . PASS END=43520350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr2 43520351 . A . PASS END=43520352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 43547585 . C . PASS END=43547679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:34:0,85,1127:0,85,255:40,0 chr2 43560384 . T . PASS END=43560402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,154,255:40,0 chr2 43571261 . C . PASS END=43571272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:29,0 chr2 43571273 . C . PASS END=43571273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 43571274 . A . PASS END=43571278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:30,0 chr2 43571279 . T . PASS END=43571279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 43571280 . T . PASS END=43571325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:30:0,81,1103:0,81,255:40,0 chr2 43571326 . T . PASS END=43571326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1496:0,71,255:37,0 chr2 43571327 . G . PASS END=43571347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,102,1530:0,123,255:40,0 chr2 43571348 . T . PASS END=43571376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,67,255:26,0 chr2 43625110 . C . PASS END=43625115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,116,1643:0,116,255:40,0 chr2 43625116 . A . PASS END=43625139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:45:0,118,1568:0,118,255:40,0 chr2 43625140 . C . PASS END=43625140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1740:0,79,255:40,0 chr2 43625141 . C . PASS END=43625146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 43625147 . C . PASS END=43625183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:53:0,120,1800:0,127,255:40,0 chr2 43625184 . T A, 49.97 PASS DP=55;MQ=250.00;MQRankSum=6.356;ReadPosRankSum=2.635;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,27,0:0.491,0.000:55:14,15,0:14,12,0:48:85,0,50,915,963,1878:255,0,255:23,0:4.9972e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,5,11,16:11,17,15,12 chr2 43625185 . T . PASS END=43625221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,102,1607:0,102,255:40,0 chr2 43625222 . G . PASS END=43625267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1215:0,90,255:40,0 chr2 43625268 . A . PASS END=43625278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:25,0 chr2 43655239 . C . PASS END=43655370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:36:0,94,1272:0,94,255:40,0 chr2 43657352 . C . PASS END=43657353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 43657354 . G . PASS END=43657357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 43657358 . A . PASS END=43657358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 43657359 . C . PASS END=43657441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:32:0,92,1194:0,92,255:40,0 chr2 43674119 . T . PASS END=43674137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1449:0,90,255:40,0 chr2 43712373 . C . PASS END=43712464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:64:0,120,1800:0,182,255:40,0 chr2 43725972 . T . PASS END=43726081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:32:0,80,1153:0,80,255:40,1 chr2 43726082 . T . PASS END=43726082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:29,0 chr2 43726083 . T . PASS END=43726086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr2 43726087 . G . PASS END=43726087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:26,0 chr2 43726088 . C . PASS END=43726090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 43726091 . G . PASS END=43726094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:25,0 chr2 43732761 . C . PASS END=43732761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 43732762 . T . PASS END=43732874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:30:0,90,1109:0,90,255:40,0 chr2 43735787 . C . PASS END=43735919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:32:0,83,1178:0,83,255:40,0 chr2 43755018 . C . PASS END=43755029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,120,1800:0,135,255:40,0 chr2 43755030 . T . PASS END=43755127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:59:0,120,1800:0,154,255:40,0 chr2 43768298 . C . PASS END=43768304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,864:0,72,255:26,0 chr2 43768305 . A . PASS END=43768308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:30,0 chr2 43768309 . T . PASS END=43768309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:29,0 chr2 43768310 . C . PASS END=43768310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 43768311 . A . PASS END=43768311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 43768312 . A . PASS END=43768423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:31:0,83,1125:0,83,255:40,0 chr2 43768424 . C . PASS END=43768438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:26:0,60,900:0,72,255:27,0 chr2 43768439 . T . PASS END=43768439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,792:0,23,255:20,0 chr2 43768440 . G . PASS END=43768445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr2 43768446 . A . PASS END=43768455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:20:0,36,540:0,50,255:13,0 chr2 43776349 . C . PASS END=43776507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:37:0,103,1344:0,103,255:40,0 chr2 43778928 . C . PASS END=43778935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:25,0 chr2 43778936 . G . PASS END=43778936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 43778937 . T . PASS END=43778938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr2 43778939 . T . PASS END=43778947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1182:0,88,255:36,0 chr2 43778948 . A . PASS END=43778948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr2 43778949 . T . PASS END=43779021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:37:0,98,1307:0,98,255:40,0 chr2 43779022 . C . PASS END=43779022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1551:0,77,255:39,0 chr2 43779023 . T . PASS END=43779064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1087:0,82,255:39,0 chr2 43779339 . T . PASS END=43779351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,955:0,75,255:26,0 chr2 43779352 . A . PASS END=43779352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr2 43779353 . A . PASS END=43779356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 43779357 . C . PASS END=43779454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:27:0,80,984:0,80,255:40,0 chr2 43779455 . G . PASS END=43779455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 43779456 . A . PASS END=43779467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,928:0,84,255:29,0 chr2 43779468 . G . PASS END=43779478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr2 43783473 . T . PASS END=43783694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:47:0,111,1726:0,111,255:40,0 chr2 43787373 . C . PASS END=43787510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:90:57:0,90,1350:0,138,255:40,0 chr2 43787511 . T . PASS END=43787520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:71:32:0,71,1080:0,71,255:25,0 chr2 43787521 . C . PASS END=43787521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:23,0 chr2 43787522 . T . PASS END=43787524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 43793535 . C . PASS END=43793687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:41:0,107,1482:0,107,255:40,0 chr2 43793688 . T . PASS END=43793724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:61:0,120,1800:0,167,255:40,0 chr2 43793725 . G A, 49.48 PASS DP=70;MQ=250.00;MQRankSum=7.117;ReadPosRankSum=3.447;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,32,0:0.464,0.000:69:19,16,0:18,16,0:48:84,0,50,1071,1314,2385:255,0,255:32,0:4.9484e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,17,19,13:20,17,17,15 chr2 43793726 . A . PASS END=43793762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,161,255:40,0 chr2 43793763 . T . PASS END=43793896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:65:0,120,1800:0,141,255:40,0 chr2 43793897 . T . PASS END=43793897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,9:77:59:77:0,59,2134:0,59,255:40,0 chr2 43793898 . C . PASS END=43793920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:74:0,120,1800:0,142,255:40,0 chr2 43793921 . A . PASS END=43793959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:81:58:0,81,1215:0,110,255:40,0 chr2 43793960 . T . PASS END=43793960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:75:57:0,75,1125:0,154,255:24,0 chr2 43797527 . C . PASS END=43797581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:46:0,95,1678:0,95,255:40,0 chr2 43797582 . T . PASS END=43797618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,144,255:40,0 chr2 43797619 . C T, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.330;ReadPosRankSum=4.555;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,30,0:0.545,0.000:55:14,15,0:11,15,0:48:85,0,49,1014,878,1892:255,0,255:22,0:5.0000e+01,6.8598e-05,5.2389e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,11,16,14:13,12,15,15 chr2 43797620 . C . PASS END=43797654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,117,1755:0,123,255:40,0 chr2 43798846 . C . PASS END=43798990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:90:44:0,90,1350:0,121,255:40,0 chr2 43798991 . T . PASS END=43799001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:69:31:0,69,1035:0,77,255:25,0 chr2 43799953 . T . PASS END=43799953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 43799954 . T . PASS END=43799994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,762:0,60,255:26,0 chr2 43799995 . A . PASS END=43800099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1047:0,81,255:40,0 chr2 43800100 . A . PASS END=43800100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 43800101 . G . PASS END=43800110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,95,255:28,0 chr2 43800111 . A . PASS END=43800131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,862:0,64,255:26,0 chr2 43801475 . C . PASS END=43801477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 43801478 . T . PASS END=43801478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 43801479 . T . PASS END=43801480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 43801481 . T . PASS END=43801481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 43801482 . A . PASS END=43801482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 43801483 . G . PASS END=43801483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 43801484 . C . PASS END=43801674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:31:0,90,1135:0,90,255:40,0 chr2 43801675 . T . PASS END=43801711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,152,255:40,0 chr2 43801712 . A G, 50.00 PASS DP=55;MQ=250.00;MQRankSum=6.305;ReadPosRankSum=3.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,31,0:0.564,0.000:55:11,13,0:13,18,0:48:85,0,49,1092,846,1939:255,0,255:23,0:5.0000e+01,7.3517e-05,5.1593e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,15,13,18:14,10,11,20 chr2 43801713 . G . PASS END=43801749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,121,255:40,0 chr2 43801750 . A . PASS END=43802030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:42:0,93,1485:0,93,255:40,0 chr2 43802031 . T . PASS END=43802031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1303:0,73,255:37,0 chr2 43802032 . C . PASS END=43802147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:35:0,89,1249:0,89,255:40,0 chr2 43802148 . C . PASS END=43802148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:31,0 chr2 43802149 . A . PASS END=43802155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1294:0,89,255:31,0 chr2 43802156 . G . PASS END=43802158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 43802159 . C . PASS END=43802166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,89,255:28,0 chr2 43804161 . T . PASS END=43804166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:19,0 chr2 43804167 . C . PASS END=43804176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:23,0 chr2 43804177 . A . PASS END=43804177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 43804178 . C . PASS END=43804180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,756:0,69,255:23,0 chr2 43804181 . A . PASS END=43804181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 43804182 . A . PASS END=43804191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr2 43804192 . T . PASS END=43804193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,961:0,65,255:24,0 chr2 43804194 . T . PASS END=43804194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr2 43804195 . C . PASS END=43804198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:25,0 chr2 43804199 . G . PASS END=43804228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1097:0,82,255:38,0 chr2 43804229 . T C, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=1.177;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:13,10,0:7,10,0:48:85,0,50,687,674,1361:255,0,255:19,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,12,8:14,6,10,10 chr2 43804230 . C . PASS END=43804256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:37:0,97,1351:0,97,255:38,0 chr2 43804257 . G . PASS END=43804257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr2 43804258 . T . PASS END=43804266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1435:0,104,255:38,0 chr2 43804267 . A . PASS END=43804356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:35:0,84,1260:0,91,255:40,0 chr2 43804357 . C . PASS END=43804357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1097:0,63,255:27,0 chr2 43804358 . T . PASS END=43804359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 43804360 . A . PASS END=43804364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:31:0,57,855:0,93,255:19,0 chr2 43804365 . A . PASS END=43804381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 43805652 . C . PASS END=43805739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:40:0,84,1260:0,104,255:40,0 chr2 43805740 . A . PASS END=43805746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr2 43808880 . C . PASS END=43808880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr2 43808881 . A . PASS END=43808881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr2 43808882 . T . PASS END=43808883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:25,0 chr2 43808884 . G . PASS END=43808889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr2 43808890 . A . PASS END=43808893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1025:0,60,255:30,0 chr2 43808894 . T . PASS END=43808895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,93,255:31,0 chr2 43808896 . G . PASS END=43808896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 43808897 . G . PASS END=43808918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1141:0,82,255:34,0 chr2 43808919 . A . PASS END=43808919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1185:0,55,255:32,0 chr2 43808920 . C . PASS END=43808975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,980:0,83,255:34,0 chr2 43808976 . G . PASS END=43808976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 43808977 . T . PASS END=43808982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr2 43808983 . C . PASS END=43808984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 43808985 . G . PASS END=43808989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 43808990 . A . PASS END=43808990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:26,0 chr2 43808991 . A . PASS END=43808995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 43808996 . A . PASS END=43808997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 43808998 . T . PASS END=43808998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 43808999 . G . PASS END=43808999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr2 43809000 . A . PASS END=43809000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 43809001 . A . PASS END=43809018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,909:0,62,255:25,0 chr2 43809019 . T . PASS END=43809019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 43809020 . A . PASS END=43809022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 43809023 . T . PASS END=43809032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr2 43809033 . A . PASS END=43809033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:21:23:0,21,585:0,21,255:18,0 chr2 43809034 . C . PASS END=43809067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,637:0,40,255:19,0 chr2 43813540 . C . PASS END=43813588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,173,255:40,0 chr2 43813841 . C . PASS END=43813873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,2:91:99:82:0,120,1800:0,202,255:40,0 chr2 43813993 . C . PASS END=43814141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,111,1665:0,123,255:40,0 chr2 43817963 . C . PASS END=43817996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1360:0,84,255:40,0 chr2 43817997 . T . PASS END=43818093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:36:0,87,1197:0,91,255:40,0 chr2 43819091 . C . PASS END=43819185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:59:0,120,1800:0,152,255:40,0 chr2 43819456 . A . PASS END=43819531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,162,255:40,0 chr2 43871813 . A . PASS END=43871813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,885:0,75,255:25,0 chr2 43871814 . T . PASS END=43871816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr2 43871817 . C . PASS END=43871817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 43871818 . A . PASS END=43871819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 43871820 . A . PASS END=43871820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 43871821 . G . PASS END=43871829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:28:0,83,1033:0,83,255:30,0 chr2 43871830 . G . PASS END=43871830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr2 43871831 . C . PASS END=43871840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1308:0,92,255:40,0 chr2 43871841 . C . PASS END=43871841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1474:0,77,255:40,0 chr2 43871842 . A . PASS END=43871935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:41:0,87,1462:0,87,255:40,0 chr2 43877156 . A G, 45.31 PASS DP=30;MQ=250.00;MQRankSum=4.476;ReadPosRankSum=3.314;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,11,0:0.367,0.000:30:11,6,0:8,5,0:45:80,0,50,385,679,1065:255,0,255:19,0:4.5311e+01,1.4962e-04,5.3000e+01,3.8526e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,7,4:7,12,6,5 chr2 43902514 . T . PASS END=43902548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:39:0,87,1356:0,87,255:40,0 chr2 43902549 . C . PASS END=43903028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:88:39:0,88,1413:0,88,255:40,0 chr2 43903029 . T . PASS END=43903065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,107,1800:0,107,255:40,0 chr2 43903066 . A G, 203.04 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,23,0:0,29,0:153:241,156,0,1971,156,1971:255,156,0:0,0:2.0304e+02,1.5304e+02,0.0000e+00,4.5000e+02,1.8781e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,28:0,0,37,15 chr2 43903067 . C . PASS END=43903103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,143,255:40,0 chr2 43903104 . T . PASS END=43903260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:31:0,83,1186:0,83,255:40,0 chr2 43903261 . A . PASS END=43903261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:28,0 chr2 43903262 . C . PASS END=43903316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1265:0,92,255:38,0 chr2 43903317 . T . PASS END=43903353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1282:0,94,255:39,0 chr2 43903354 . T C, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,21,0:0,15,0:105:193,108,0,1388,108,1388:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,16:0,0,19,17 chr2 43903355 . T . PASS END=43903368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1280:0,92,255:34,0 chr2 43903369 . A . PASS END=43903369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1154:0,72,255:33,0 chr2 43903370 . A . PASS END=43903391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1264:0,89,255:35,0 chr2 43903392 . T . PASS END=43903392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1349:0,105,255:35,0 chr2 43903393 . T . PASS END=43903393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1262:0,78,255:35,0 chr2 43903394 . A . PASS END=43903440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1189:0,86,255:37,0 chr2 43903441 . T . PASS END=43903441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr2 43903442 . G . PASS END=43903445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,98,255:32,0 chr2 43903446 . C . PASS END=43903459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr2 43903460 . A . PASS END=43903460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 43903461 . T . PASS END=43903461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 43906002 . A . PASS END=43906064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:59:0,120,1800:0,145,255:40,0 chr2 43919653 . G . PASS END=43919802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:83:53:0,83,1800:0,83,255:40,0 chr2 43921570 . A . PASS END=43921653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:90:0,120,1800:0,228,255:40,0 chr2 43922282 . C . PASS END=43922363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:61:0,120,1800:0,173,255:40,0 chr2 43924310 . A . PASS END=43924310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 43924311 . A . PASS END=43924313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 43924314 . T . PASS END=43924314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 43924315 . C . PASS END=43924321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1141:0,87,255:31,0 chr2 43924322 . A . PASS END=43924322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 43924323 . G . PASS END=43924493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1149:0,93,255:40,0 chr2 43924494 . A . PASS END=43924495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 43926786 . A . PASS END=43926786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr2 43926787 . A . PASS END=43926798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:32,0 chr2 43926799 . A . PASS END=43926799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:29,0 chr2 43926800 . G . PASS END=43926803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:31,0 chr2 43926804 . A . PASS END=43926804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1133:0,58,255:30,0 chr2 43926805 . G . PASS END=43926814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 43926815 . A . PASS END=43926815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:30,0 chr2 43926816 . A . PASS END=43926835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1097:0,81,255:38,0 chr2 43926836 . A . PASS END=43926836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:36,0 chr2 43926837 . G . PASS END=43926894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:86:38:0,86,1419:0,86,255:40,0 chr2 43926895 . A . PASS END=43926895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1551:0,69,255:38,0 chr2 43926896 . A . PASS END=43926905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:96:43:0,96,1442:0,96,255:39,0 chr2 43926906 . C . PASS END=43926942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:35:0,90,1258:0,91,255:35,0 chr2 43926943 . T A, 50.00 PASS DP=37;MQ=247.18;MQRankSum=4.149;ReadPosRankSum=2.302;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,23,0:0.622,0.000:37:3,14,0:11,9,0:46:85,0,45,806,501,1307:255,0,255:14,0:5.0000e+01,1.0924e-04,4.8201e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,10,13:11,3,11,12 chr2 43926944 . G . PASS END=43926980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:36:0,90,1451:0,90,255:40,0 chr2 43926981 . A . PASS END=43927038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:42:0,96,1443:0,96,255:40,0 chr2 43927039 . G . PASS END=43927039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1449:0,79,255:37,0 chr2 43927040 . G . PASS END=43927421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:41:0,80,1434:0,80,255:40,0 chr2 43927422 . G . PASS END=43927458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,107,1796:0,107,255:40,0 chr2 43927459 . C G, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.236;ReadPosRankSum=1.824;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,27,0:0.509,0.000:53:12,13,0:14,14,0:48:85,0,50,958,930,1888:255,0,255:25,0:5.0000e+01,6.5233e-05,5.2971e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,15,16,11:17,9,12,15 chr2 43927460 . A . PASS END=43927496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,153,255:40,0 chr2 43927497 . G . PASS END=43927747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:46:0,93,1746:0,93,255:40,0 chr2 43931120 . G . PASS END=43931138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:82:0,103,1800:0,103,255:40,0 chr2 43931139 . T . PASS END=43931175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,3:92:99:85:0,120,1800:0,201,255:40,0 chr2 43931176 . T C, 49.26 PASS DP=88;MQ=249.37;MQRankSum=7.946;ReadPosRankSum=3.531;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,39,0:0.453,0.000:86:21,21,0:26,18,0:48:84,0,50,1365,1635,2999:255,0,255:40,0:4.9264e+01,7.3258e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,29,12,27:24,23,16,23 chr2 43931177 . A . PASS END=43931195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,153,255:40,0 chr2 43933461 . A . PASS END=43933551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:35:0,84,1260:0,92,255:40,0 chr2 43933552 . G . PASS END=43933555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr2 43934540 . A . PASS END=43934542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 43934543 . G . PASS END=43934545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 43934546 . A . PASS END=43934546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 43934547 . C . PASS END=43934548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:30,0 chr2 43934549 . C . PASS END=43934549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr2 43934550 . A . PASS END=43934652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1095:0,89,255:37,0 chr2 43934653 . T . PASS END=43934661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr2 43934662 . C . PASS END=43934663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:27:0,57,855:0,81,255:19,0 chr2 43934664 . G . PASS END=43934669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:21,0 chr2 43934670 . G . PASS END=43934684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,675:0,48,255:17,0 chr2 43937129 . G . PASS END=43937265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:31:0,86,1133:0,86,255:40,0 chr2 43937359 . G . PASS END=43937469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,116,1800:0,116,255:40,0 chr2 43937628 . A . PASS END=43937673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:80:67:0,80,1800:0,80,255:40,0 chr2 43937674 . C . PASS END=43937695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:85:79:0,85,1800:0,85,255:40,0 chr2 43937696 . T . LowGQ END=43937696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,13:80:0:80:0,0,2041:63,0,255:40,0 chr2 43937697 . A . PASS END=43937698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,207,255:40,0 chr2 43937699 . C . PASS END=43937699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,7:80:43:80:0,43,2272:0,43,255:40,0 chr2 43937700 . A . PASS END=43937702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,202,255:40,0 chr2 43937703 . C . PASS END=43937703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,6:79:78:79:0,78,2303:0,78,255:40,0 chr2 43937704 . A . PASS END=43937714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:81:74:0,81,1215:0,100,255:40,0 chr2 43939364 . T . PASS END=43939522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:36:0,108,1268:0,108,255:40,0 chr2 43947808 . G . PASS END=43947888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:69:0,120,1800:0,174,255:40,0 chr2 43953411 . T . PASS END=43953577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:84:29:0,84,963:0,87,255:40,0 chr2 43953578 . C . PASS END=43953590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:26,0 chr2 43956776 . G . PASS END=43956778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:37:0,94,1282:0,94,255:38,0 chr2 43956779 . A . PASS END=43956779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1364:0,73,255:37,0 chr2 43956780 . C . PASS END=43956884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,104,1370:0,104,255:40,0 chr2 43958629 . C . PASS END=43958741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,101,1426:0,101,255:40,0 chr2 43961706 . T . PASS END=43961714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,147,255:40,0 chr2 43961715 . C . PASS END=43961751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,181,255:40,0 chr2 43961752 . A G, 50.00 PASS DP=69;MQ=249.62;MQRankSum=6.733;ReadPosRankSum=3.201;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,36,0:0.522,0.000:69:16,14,0:17,22,0:48:85,0,50,1288,1128,2415:255,0,255:30,0:5.0000e+01,6.6269e-05,5.2814e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,23,20,16:17,16,16,20 chr2 43961753 . G . PASS END=43961789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,156,255:40,0 chr2 43961790 . G . PASS END=43961804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,115,1537:0,115,255:40,0 chr2 43965480 . A . PASS END=43965490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:22,0 chr2 43965491 . T . PASS END=43965492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 43965493 . T . PASS END=43965498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 43965499 . A . PASS END=43965501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 43965502 . C . PASS END=43965510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,848:0,61,255:26,0 chr2 43965511 . A . PASS END=43965659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,956:0,81,255:40,0 chr2 43968085 . G . PASS END=43968182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,99,1485:0,110,255:40,0 chr2 43969880 . G . PASS END=43969884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr2 43969885 . A . PASS END=43969885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,685:0,27,255:21,0 chr2 43969886 . A . PASS END=43969896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 43969897 . A . PASS END=43969897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 43969898 . T . PASS END=43969902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:24,0 chr2 43969903 . T . PASS END=43969903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 43969904 . T . PASS END=43969909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 43969910 . C . PASS END=43969913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr2 43969914 . C . PASS END=43969917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 43969918 . G . PASS END=43970018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1275:0,95,255:40,0 chr2 43970019 . T . PASS END=43970044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr2 43970045 . T . PASS END=43970046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:15,0 chr2 43970047 . G . PASS END=43970047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:14,0 chr2 43970048 . G . PASS END=43970048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:15,0 chr2 43970049 . A . PASS END=43970057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:30:15:0,30,450:0,45,255:12,0 chr2 43970973 . G . PASS END=43970980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr2 43970981 . T . PASS END=43971092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,956:0,81,255:40,0 chr2 43971093 . A . PASS END=43971093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:26,0 chr2 43971094 . G . PASS END=43971101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,85,255:29,0 chr2 43971102 . G . PASS END=43971123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:24,0 chr2 43971124 . T . PASS END=43971128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 43973005 . A . PASS END=43973102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,131,255:40,1 chr2 43980758 . A . PASS END=43980899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:93:31:0,93,1186:0,93,255:40,0 chr2 43984258 . G . PASS END=43984403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:42:0,89,1487:0,89,255:40,0 chr2 43986039 . G . PASS END=43986072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,840:0,62,255:26,0 chr2 43986073 . G . PASS END=43986085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:30,0 chr2 43986086 . A . PASS END=43986087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1123:0,77,255:28,0 chr2 43986088 . A . PASS END=43986088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:26,0 chr2 43986089 . G . PASS END=43986090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 43986091 . G . PASS END=43986091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:26,0 chr2 43986092 . C . PASS END=43986093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr2 43986094 . G . PASS END=43986096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 43986097 . G . PASS END=43986097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:26,0 chr2 43986098 . A . PASS END=43986115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,969:0,90,255:31,0 chr2 43986116 . T . PASS END=43986116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 43986117 . G . PASS END=43986124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1156:0,93,255:31,0 chr2 43986125 . C . PASS END=43986164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 43986165 . A . PASS END=43986168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 43989443 . C . PASS END=43989529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,163,255:40,0 chr2 43991367 . A . PASS END=43991394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,120,1800:0,135,255:40,0 chr2 43991395 . G . PASS END=43991504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:69:0,120,1800:0,207,255:40,0 chr2 43992552 . A . PASS END=43992553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,765:0,72,255:24,0 chr2 43992554 . T . PASS END=43992554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 43992555 . C . PASS END=43992560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr2 43992561 . A . PASS END=43992561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:22,0 chr2 43992562 . T . PASS END=43992566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 43992567 . C . PASS END=43992567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr2 43992568 . T . PASS END=43992569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr2 43992570 . T . PASS END=43992573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 43992574 . T . PASS END=43992574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 43992575 . C . PASS END=43992577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 43992578 . C . PASS END=43992578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 43992579 . A . PASS END=43992583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,966:0,81,255:28,0 chr2 43992584 . C . PASS END=43992584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 43992585 . A . PASS END=43992592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:86:29:0,86,863:0,86,255:31,0 chr2 43992593 . C . PASS END=43992593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 43992594 . T . PASS END=43992594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 43992595 . T . PASS END=43992597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 43992598 . A . PASS END=43992737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:31:0,83,1172:0,83,255:40,0 chr2 44001278 . A . PASS END=44001285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,105,1575:0,114,255:37,0 chr2 44003921 . T . PASS END=44003972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,114,1779:0,114,255:40,0 chr2 44003973 . G . PASS END=44004009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:59:0,114,1800:0,114,255:40,0 chr2 44004010 . T C, 49.77 PASS DP=57;MQ=250.00;MQRankSum=6.465;ReadPosRankSum=3.604;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,27,0:0.474,0.000:57:12,16,0:18,11,0:48:85,0,50,937,1036,1973:255,0,255:27,0:4.9769e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,9,18:16,14,12,15 chr2 44004011 . T . PASS END=44004038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:52:0,120,1800:0,123,255:40,0 chr2 44010659 . G . PASS END=44010693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:106:0,120,1800:0,255,255:40,0 chr2 44014320 . A . PASS END=44014389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:96:0,120,1800:0,245,255:40,0 chr2 44016772 . C . PASS END=44016823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:43:0,107,1448:0,107,255:40,0 chr2 44016824 . A . PASS END=44016824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1627:0,75,255:37,0 chr2 44016825 . C . PASS END=44016860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:34:0,89,1279:0,89,255:40,0 chr2 44019815 . C . PASS END=44019929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:60:0,120,1800:0,143,255:40,0 chr2 44021596 . G . PASS END=44021609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,829:0,65,255:25,0 chr2 44021610 . T . PASS END=44021624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,996:0,84,255:32,0 chr2 44021625 . T . PASS END=44021625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:33,0 chr2 44021626 . T . PASS END=44021788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:86:35:0,86,1274:0,86,255:40,0 chr2 44021789 . T . PASS END=44021825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,101,1620:0,101,255:40,0 chr2 44021826 . T A, 45.04 PASS DP=45;MQ=250.00;MQRankSum=5.560;ReadPosRankSum=0.691;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,17,0:0.378,0.000:45:14,8,0:14,9,0:44:80,0,50,576,943,1520:255,0,255:24,0:4.5045e+01,1.5765e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,11,6,11:11,17,13,4 chr2 44021827 . T . PASS END=44021836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:39:0,81,1215:0,101,255:34,0 chr2 44021837 . G . PASS END=44021846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:28:0,75,1125:0,84,255:25,0 chr2 44021847 . C . PASS END=44021849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 44021850 . A . PASS END=44021850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,832:0,64,255:26,0 chr2 44021851 . C . PASS END=44021852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 44021853 . A . PASS END=44021863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,886:0,64,255:26,0 chr2 44021864 . T . PASS END=44021868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:24,0 chr2 44021869 . A . PASS END=44021870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44021871 . G . PASS END=44021871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr2 44021872 . C . PASS END=44021873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44021874 . T . PASS END=44021874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:27,0 chr2 44021875 . G . PASS END=44021881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 44023025 . G . PASS END=44023097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,213,255:40,0 chr2 44023857 . G . PASS END=44023934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:79:0,120,1800:0,204,255:40,0 chr2 44027968 . A . PASS END=44027968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 44027980 . T . PASS END=44028012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,146,255:40,0 chr2 44028013 . A T, 48.23 PASS DP=75;MQ=248.93;MQRankSum=6.904;ReadPosRankSum=6.111;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,32,0:0.427,0.000:75:21,16,0:22,16,0:47:83,0,50,1116,1444,2559:255,0,255:40,0:4.8225e+01,8.6978e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,30,15,17:23,20,15,17 chr2 44028014 . T . PASS END=44028050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,162,255:40,0 chr2 44028051 . C . PASS END=44028056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,197,255:40,0 chr2 44028778 . C . PASS END=44028848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,130,255:40,0 chr2 44031781 . G . PASS END=44031878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,116,1620:0,116,255:40,0 chr2 44032293 . A . PASS END=44032397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,108,1620:0,115,255:40,0 chr2 44033531 . T . PASS END=44033550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,173,255:40,0 chr2 44036844 . G . PASS END=44036875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:71:0,120,1800:0,197,255:40,0 chr2 44036876 . G . PASS END=44036906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:81:0,120,1800:0,227,255:40,0 chr2 44037520 . G . PASS END=44037648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:44:0,116,1592:0,116,255:40,0 chr2 44039634 . G . PASS END=44039634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 44039663 . C . PASS END=44039663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 44039744 . G . PASS END=44039744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 44039897 . T . PASS END=44039897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 44039903 . A . PASS END=44039903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44039970 . C . PASS END=44039970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 44040030 . C . PASS END=44040030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 44040102 . G . PASS END=44040102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 44040255 . C . PASS END=44040448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:36:0,88,1266:0,88,255:40,0 chr2 44041616 . C . PASS END=44041728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:67:0,120,1800:0,172,255:40,0 chr2 44047054 . C . PASS END=44047055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 44047056 . G . PASS END=44047057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 44047058 . G . PASS END=44047060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 44047061 . A . PASS END=44047063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44047064 . C . PASS END=44047068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 44047069 . C . PASS END=44047239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:80:28:0,80,1185:0,80,255:40,0 chr2 44049936 . C . PASS END=44050013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,1039:0,81,255:40,0 chr2 44050014 . T . PASS END=44050050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,102,255:39,0 chr2 44050051 . C T, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.739;ReadPosRankSum=2.324;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,22,0:0.647,0.000:34:7,11,0:5,11,0:45:85,0,44,787,420,1207:255,0,255:9,0:5.0000e+01,1.4030e-04,4.6513e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,3,7,15:8,4,12,10 chr2 44050052 . G . PASS END=44050057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 44050058 . A . PASS END=44050058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:25,0 chr2 44050059 . G . PASS END=44050059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:25,0 chr2 44050060 . C . PASS END=44050062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44050063 . G . PASS END=44050063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,947:0,40,255:25,0 chr2 44050064 . C . PASS END=44050064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44050065 . A . PASS END=44050065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 44050066 . G . PASS END=44050066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr2 44050067 . C . PASS END=44050074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 44050076 . T . PASS END=44050076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 44051052 . A . PASS END=44051067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:18,0 chr2 44051068 . C . PASS END=44051074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:24,0 chr2 44051075 . C . PASS END=44051119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,986:0,81,255:40,0 chr2 44051120 . C . PASS END=44051120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1465:0,49,255:38,0 chr2 44051121 . G . PASS END=44051257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:89:39:0,89,1607:0,89,255:40,0 chr2 44051345 . G . PASS END=44051345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 44051358 . C . PASS END=44051571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:46:0,120,1800:0,122,255:40,0 chr2 44051573 . T . PASS END=44051573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 44051783 . T . PASS END=44051898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:35:0,92,1296:0,92,255:40,0 chr2 44052028 . T . PASS END=44052157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,101,1206:0,101,255:40,0 chr2 44052160 . G . PASS END=44052160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr2 44053521 . C . PASS END=44053660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:93:39:0,93,1480:0,93,255:40,0 chr2 44055119 . T . PASS END=44055119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1327:0,105,255:35,0 chr2 44055122 . T . PASS END=44055254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,108,1289:0,108,255:40,0 chr2 44055263 . G . PASS END=44055263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 44058908 . C . PASS END=44058910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 44058911 . C . PASS END=44058912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44058913 . T . PASS END=44058913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr2 44058914 . C . PASS END=44058914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 44058915 . T . PASS END=44058915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:27,0 chr2 44058916 . G . PASS END=44058917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 44058918 . A . PASS END=44058918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 44058919 . A . PASS END=44058919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:27,0 chr2 44058920 . G . PASS END=44058922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 44058923 . G . PASS END=44058923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 44058924 . C . PASS END=44058934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44058935 . G . PASS END=44058935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 44058936 . C . PASS END=44058940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 44058941 . G . PASS END=44058941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 44058942 . A . PASS END=44058947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 44058948 . A . PASS END=44058951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 44058952 . G . PASS END=44058954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44058955 . C . PASS END=44058956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:26,0 chr2 44058957 . G . PASS END=44058986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:32:0,82,1125:0,82,255:36,0 chr2 44058987 . C . PASS END=44058987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:27,0 chr2 44058988 . T . PASS END=44059001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1189:0,88,255:32,0 chr2 44059002 . T . PASS END=44059002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1160:0,71,255:28,0 chr2 44059003 . C . PASS END=44059008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:29,0 chr2 44059011 . A . PASS END=44059011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 44059014 . A . PASS END=44059014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 44059086 . C . PASS END=44059112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:25,0 chr2 44059113 . G . PASS END=44059121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 44059122 . C . PASS END=44059122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 44059123 . C . PASS END=44059125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 44059126 . C . PASS END=44059129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 44059130 . G . PASS END=44059136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44059137 . G . PASS END=44059164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:27,0 chr2 44059165 . G . PASS END=44059165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 44059166 . T . PASS END=44059173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 44059174 . C . PASS END=44059195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 44059196 . C . PASS END=44059196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 44059197 . G . PASS END=44059197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 44059198 . T . PASS END=44059198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 44059199 . C . PASS END=44059204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 44059205 . G . PASS END=44059222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 44059726 . A . PASS END=44059726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 44059727 . T . PASS END=44059727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 44059728 . G . PASS END=44059747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1047:0,84,255:32,0 chr2 44059748 . C . PASS END=44059748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:31,0 chr2 44059749 . A . PASS END=44059800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1170:0,83,255:34,0 chr2 44064963 . C . PASS END=44064963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 44064973 . C . PASS END=44064980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 44064981 . C . PASS END=44064981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 44064982 . C . PASS END=44065033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1056:0,85,255:35,0 chr2 44065034 . G . PASS END=44065034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr2 44065035 . A . PASS END=44065064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:32,0 chr2 44065065 . G . PASS END=44065073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:28:0,60,900:0,68,255:25,0 chr2 44065074 . C . PASS END=44065074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 44065075 . A . PASS END=44065091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 44065092 . T . PASS END=44065092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 44065093 . G . PASS END=44065093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 44065094 . G . PASS END=44065094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 44065676 . C . PASS END=44065683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 44065684 . G . PASS END=44065692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:18,0 chr2 44065693 . A . PASS END=44065693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 44065694 . T . PASS END=44065700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 44065701 . T . PASS END=44065730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,831:0,66,255:26,0 chr2 44065731 . C . PASS END=44065736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 44065737 . C . PASS END=44065739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 44065740 . C . PASS END=44065744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44065745 . A . PASS END=44065748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 44065749 . A . PASS END=44065763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:30,0 chr2 44065764 . T . PASS END=44065764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 44065765 . G . PASS END=44065768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1060:0,93,255:31,0 chr2 44065769 . A . PASS END=44065769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 44065770 . C . PASS END=44065770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 44065771 . T . PASS END=44065771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 44065772 . T . PASS END=44065774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 44065775 . A . PASS END=44065777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1131:0,77,255:26,0 chr2 44065778 . C . PASS END=44065802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1073:0,80,255:31,0 chr2 44065803 . A . PASS END=44065803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:29,0 chr2 44065804 . T . PASS END=44065809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1180:0,83,255:30,0 chr2 44065810 . G . PASS END=44065810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1180:0,58,255:28,0 chr2 44065811 . T . PASS END=44065818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1255:0,86,255:33,0 chr2 44065842 . C . PASS END=44065842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 44065851 . T . PASS END=44065851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1316:0,92,255:34,0 chr2 44065859 . G . PASS END=44065859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 44065903 . T . PASS END=44065903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 44066162 . T . PASS END=44066162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 44066166 . G . PASS END=44066166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 44066183 . T . PASS END=44066183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 44066193 . A . PASS END=44066194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 44066195 . G . PASS END=44066205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 44066206 . C . PASS END=44066206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 44066207 . G . PASS END=44066213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:23,0 chr2 44066214 . G . PASS END=44066214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 44066215 . A . PASS END=44066244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,817:0,69,255:25,0 chr2 44066245 . A . PASS END=44066246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 44066247 . G . PASS END=44066253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,62,255:20,0 chr2 44066254 . C . PASS END=44066254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 44066255 . G . PASS END=44066255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr2 44071644 . A . PASS END=44071644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 44071646 . G . PASS END=44071707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:88:35:0,88,1227:0,88,255:37,0 chr2 44071708 . C . PASS END=44071710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 44071711 . G . PASS END=44071716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr2 44071717 . C . PASS END=44071719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 44071720 . C . PASS END=44071722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 44071723 . G . PASS END=44071738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 44071739 . A . PASS END=44071739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 44071740 . A . PASS END=44071741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 44071742 . T . PASS END=44071742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 44071743 . A . PASS END=44071743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 44071744 . C . PASS END=44071747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 44071757 . C . PASS END=44071757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 44073294 . G . PASS END=44073304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,396:0,33,255:13,0 chr2 44073305 . C . PASS END=44073305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 44073306 . T . PASS END=44073332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,483:0,42,255:15,0 chr2 44073333 . G . PASS END=44073333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 44073334 . C . PASS END=44073337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:16,0 chr2 44073338 . G . PASS END=44073340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 44073341 . C . PASS END=44073341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 44073342 . A . PASS END=44073346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,602:0,60,255:20,0 chr2 44073347 . G . PASS END=44073347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 44073348 . C . PASS END=44073356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 44073357 . T . PASS END=44073357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 44073358 . C . PASS END=44073371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:23,0 chr2 44073372 . A . PASS END=44073372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr2 44073373 . A . PASS END=44073383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr2 44073384 . C . PASS END=44073384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 44073385 . T . PASS END=44073400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr2 44073401 . A . PASS END=44073401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:19,0 chr2 44073402 . A . PASS END=44073412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:20,0 chr2 44073413 . G . PASS END=44073432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 44073433 . C . PASS END=44073444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:13,0 chr2 44073445 . G . PASS END=44073447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 44073448 . C . PASS END=44073450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 44073456 . G . PASS END=44073456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 44073460 . A . PASS END=44073460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 44078723 . G . PASS END=44078725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 44078726 . G . PASS END=44078752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:83:28:0,83,837:0,83,255:29,0 chr2 44078753 . T . PASS END=44078753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 44078754 . C . PASS END=44078767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:29,0 chr2 44078768 . A . PASS END=44078768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 44078769 . C . PASS END=44078769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 44078770 . G . PASS END=44078771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 44078772 . C . PASS END=44078774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 44078775 . C . PASS END=44078782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 44078783 . A . PASS END=44078783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,902:0,40,255:24,0 chr2 44078784 . G . PASS END=44078793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 44078794 . A . PASS END=44078800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44078801 . T . PASS END=44078827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 44078828 . T . PASS END=44078830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 44078831 . T . PASS END=44078836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 44078837 . A . PASS END=44078840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:21:0,45,675:0,53,255:17,0 chr2 44078841 . T . PASS END=44078845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr2 44078846 . C . PASS END=44078865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 44078866 . C . PASS END=44078866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 44078867 . A . PASS END=44078868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 44078869 . C . PASS END=44078869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 44078870 . T . PASS END=44078887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,540:0,51,255:19,0 chr2 44078888 . T . PASS END=44078908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr2 44078909 . T . PASS END=44078949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,46,255:18,0 chr2 44078950 . C . PASS END=44078957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr2 44078958 . A . PASS END=44078961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 44078975 . C . PASS END=44078975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 44079486 . C . PASS END=44079486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 44079493 . G . PASS END=44079493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 44079494 . T . PASS END=44079494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 44079495 . G . PASS END=44079499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 44079500 . A . PASS END=44079500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 44079501 . C . PASS END=44079502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 44079503 . T . PASS END=44079503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 44079504 . G . PASS END=44079529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:26,0 chr2 44079530 . G . PASS END=44079530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 44079531 . C . PASS END=44079531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr2 44079532 . G . PASS END=44079532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 44079533 . C . PASS END=44079533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 44079534 . T . PASS END=44079535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 44079536 . A . PASS END=44079536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 44079537 . C . PASS END=44079537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 44079538 . A . PASS END=44079538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,955:0,43,255:27,0 chr2 44079539 . C . PASS END=44079541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 44079542 . G . PASS END=44079543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr2 44079544 . G . PASS END=44079547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 44079548 . G . PASS END=44079548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 44079549 . C . PASS END=44079549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 44079550 . A . PASS END=44079550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 44079551 . A . PASS END=44079551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 44079552 . C . PASS END=44079561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:62:29:0,62,1009:0,62,255:26,0 chr2 44079562 . C . PASS END=44079562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,950:0,56,255:25,0 chr2 44079563 . G . PASS END=44079564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 44079565 . G . PASS END=44079565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 44079566 . G . PASS END=44079566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:26,0 chr2 44079567 . G . PASS END=44079567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 44079568 . T . PASS END=44079568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 44079569 . T . PASS END=44079573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 44079574 . G . PASS END=44079576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44079577 . G . PASS END=44079577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 44079578 . G . PASS END=44079578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44079579 . T . PASS END=44079605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr2 44079606 . G A, 49.94 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=3.477;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:7,2,0:5,9,0:47:85,0,47,185,185,185:255,0,255:10,0:4.9935e+01,8.7495e-05,5.0000e+01,1.8471e+02,2.1948e+02,1.8772e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,9,4,7:4,8,5,6 chr2 44079607 . C . PASS END=44079607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr2 44079608 . A . PASS END=44079619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 44079620 . A . PASS END=44079620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 44079621 . C . PASS END=44079621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 44079622 . C . PASS END=44079625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:18,0 chr2 44079630 . G . PASS END=44079630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 44079632 . G . PASS END=44079632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 44079731 . T . PASS END=44079731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 44079738 . G . PASS END=44079738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 44079739 . A . PASS END=44079739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 44079740 . A . PASS END=44079740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 44079741 . T . PASS END=44079761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,631:0,51,255:19,0 chr2 44079762 . C . PASS END=44079763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 44079764 . T . PASS END=44079764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 44079765 . C . PASS END=44079766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 44079767 . G . PASS END=44079767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 44079768 . G . PASS END=44079773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 44079774 . A . PASS END=44079774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 44079775 . C . PASS END=44079780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr2 44079781 . C . PASS END=44079784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 44079785 . G . PASS END=44079789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 44079790 . C . PASS END=44079792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:20,0 chr2 44079793 . C . PASS END=44079793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 44079794 . C . PASS END=44079794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr2 44079795 . T . PASS END=44079795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,712:0,11,255:18,0 chr2 44079796 . G . PASS END=44079797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:19,0 chr2 44079798 . T . PASS END=44079798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 44079799 . G . PASS END=44079799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:18,0 chr2 44079800 . A . PASS END=44079800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 44079801 . A . LowGQ END=44079801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,615:15,0,255:15,0 chr2 44079802 . G . PASS END=44079802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:17,0 chr2 44079803 . A . PASS END=44079803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,668:0,11,255:16,0 chr2 44079804 . C . PASS END=44079804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:17,0 chr2 44079805 . C . PASS END=44079805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 44079806 . T . PASS END=44079807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:18,0 chr2 44079808 . G . PASS END=44079808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 44079809 . T . PASS END=44079809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr2 44079810 . C . PASS END=44079811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:18,0 chr2 44079812 . A . PASS END=44079819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr2 44079820 . C . PASS END=44079821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr2 44079822 . A . PASS END=44079822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr2 44079823 . A . PASS END=44079838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,643:0,48,255:17,0 chr2 44079839 . C . PASS END=44079839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:15,0 chr2 44079840 . T . PASS END=44079841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 44079842 . A . PASS END=44079842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 44079843 . T . PASS END=44079852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 44079853 . C . PASS END=44079855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 44079856 . G . PASS END=44079856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 44079857 . C . PASS END=44079857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 44079858 . C . PASS END=44079883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,571:0,41,255:19,0 chr2 44079884 . G . PASS END=44079884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 44079885 . A . PASS END=44079885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 44079886 . T . PASS END=44079891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 44079892 . C . PASS END=44079906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,597:0,40,255:18,0 chr2 44079907 . T . PASS END=44079907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:17,0 chr2 44079908 . G . PASS END=44079912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:18,0 chr2 44079913 . C . PASS END=44079913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 44079914 . C . PASS END=44079918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr2 44079919 . C . PASS END=44079975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:23,0 chr2 44079976 . T . PASS END=44079976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 44079977 . C . PASS END=44079996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 44079997 . T . PASS END=44080000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr2 44080001 . T . PASS END=44080007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr2 44099114 . G . PASS END=44099121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,884:0,61,255:25,0 chr2 44099122 . G . PASS END=44099122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr2 44099123 . A . PASS END=44099123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 44099124 . C . PASS END=44099277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:31:0,87,1305:0,90,255:40,0 chr2 44099362 . C . PASS END=44099395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1410:0,98,255:40,0 chr2 44099396 . A . PASS END=44099407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:38:0,90,1350:0,104,255:36,0 chr2 44099408 . A . PASS END=44099408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:29,0 chr2 44099409 . T . PASS END=44099424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1141:0,80,255:32,0 chr2 44099425 . G . PASS END=44099432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,79,255:26,0 chr2 44099433 . C A, 49.71 PASS DP=30;MQ=249.97;MQRankSum=4.635;ReadPosRankSum=2.141;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:8,8,0:8,6,0:48:84,0,50,493,564,1057:255,0,255:15,0:4.9711e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,3,11:8,8,5,9 chr2 44099434 . G . PASS END=44099438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:24,0 chr2 44099439 . T . PASS END=44099439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:22,0 chr2 44099440 . G . PASS END=44099445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 44099452 . A . PASS END=44099452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 44099455 . T . PASS END=44099455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr2 44100916 . G . PASS END=44100916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1217:0,96,255:32,0 chr2 44100919 . T . PASS END=44100919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr2 44100926 . T . PASS END=44101009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1210:0,86,255:40,0 chr2 44101010 . C . PASS END=44101010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:36:45:0,36,1324:0,36,255:36,0 chr2 44101011 . T . PASS END=44101105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:34:0,86,1194:0,86,255:40,0 chr2 44101106 . T . PASS END=44101106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1169:0,55,255:29,0 chr2 44101107 . C . PASS END=44101113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1224:0,83,255:30,0 chr2 44101114 . T . PASS END=44101116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1075:0,60,255:28,0 chr2 44101117 . T . PASS END=44101119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 44101120 . C . PASS END=44101120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 44101121 . C . PASS END=44101121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 44101122 . A . PASS END=44101122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 44101123 . A . PASS END=44101123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:24,0 chr2 44101124 . A . PASS END=44101125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:25,0 chr2 44101133 . T . PASS END=44101133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 44101546 . G . PASS END=44101622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,114,1554:0,114,255:40,1 chr2 44102270 . G . PASS END=44102270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 44102285 . A . PASS END=44102304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr2 44102305 . G . PASS END=44102361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,498:0,41,255:19,0 chr2 44102362 . G . PASS END=44102379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:23,0 chr2 44102380 . C . PASS END=44102380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 44102381 . C . PASS END=44102381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 44102382 . T . PASS END=44102382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 44102383 . G . PASS END=44102399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,742:0,66,255:22,0 chr2 44102400 . T . PASS END=44102409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,798:0,53,255:18,0 chr2 44102410 . G . PASS END=44102422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr2 44102423 . A . PASS END=44102423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 44102424 . G . PASS END=44102432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 44102433 . C . PASS END=44102433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:24,0 chr2 44102434 . C . PASS END=44102468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,909:0,65,255:26,0 chr2 44102469 . T . PASS END=44102469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 44102470 . G . PASS END=44102478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,878:0,75,255:26,0 chr2 44102479 . C . PASS END=44102486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 44102487 . A . PASS END=44102498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,878:0,64,255:25,0 chr2 44102499 . A . PASS END=44102543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 44102544 . T . PASS END=44102544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 44102545 . G . PASS END=44102548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 44102549 . A . PASS END=44102552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 44102558 . G . PASS END=44102558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 44104696 . C . PASS END=44104696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 44104700 . T . PASS END=44104827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:28:0,84,1011:0,84,255:40,0 chr2 44104836 . G . PASS END=44104836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1435:0,104,255:34,0 chr2 44104908 . T . PASS END=44104908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 44104915 . A . PASS END=44104924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,120,1800:0,122,255:40,0 chr2 44104925 . T C, 187.99 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,23,0:0,24,0:138:226,141,0,1783,141,1783:255,141,0:0,0:1.8799e+02,1.3799e+02,0.0000e+00,4.5000e+02,1.7276e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,23:0,0,24,23 chr2 44104926 . C . PASS END=44104962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,112,1800:0,112,255:40,0 chr2 44104963 . C . PASS END=44105052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,101,1340:0,101,255:40,0 chr2 44105058 . G . PASS END=44105058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 44105064 . C . PASS END=44105064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 44105146 . C . PASS END=44105146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 44105193 . T . PASS END=44105193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 44105258 . C . PASS END=44105258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 44105396 . A . PASS END=44105396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 44105428 . C . PASS END=44105428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 44105529 . A . PASS END=44105529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 44105559 . G . PASS END=44105559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 44105571 . C . PASS END=44105571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 44113363 . G . PASS END=44113363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,223,255:40,0 chr2 44113450 . T . PASS END=44113450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 44113462 . T . PASS END=44113462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,3:69:99:69:0,120,1800:0,158,255:40,0 chr2 44113494 . T . PASS END=44113494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 44113509 . T . PASS END=44113509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 44113515 . T . PASS END=44113515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 44113547 . T . PASS END=44113547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 44113582 . A . PASS END=44113582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 44113640 . G . PASS END=44113640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 44113690 . A . PASS END=44113690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 44113697 . C . PASS END=44113698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 44113758 . T . PASS END=44113758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 44113828 . C . PASS END=44113828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 44113844 . C . PASS END=44113845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 44113867 . G . PASS END=44113867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 44113923 . A . PASS END=44113923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 44113933 . T . PASS END=44113933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 44113987 . G . PASS END=44113987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 44114241 . C . PASS END=44114241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,555:0,7,255:13,0 chr2 44114281 . T . LowGQ END=44114281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,17:35:0:35:0,0,16:255,0,255:3,1 chr2 44114282 . C CAAAAAAAAAAAAAA,CAAAAAAAAAA,CAAAAAAAA,CAAAAAAA,CAAAAAAAAAAAA,CAAAAA, 201.06 PASS DP=27;MQ=220.88;MQRankSum=-0.639;ReadPosRankSum=0.456;FractionInformativeReads=0.704;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/4:1,5,1,5,4,1,2,0:0.263,0.053,0.263,0.211,0.053,0.105,0.000:19:0,3,0,4,3,0,1,0:1,2,1,1,1,1,1,0:2:232,220,83,180,97,126,206,32,111,67,259,31,105,162,70,187,171,124,63,58,110,433,81,129,179,236,97,133,66,10,36,22,23,30,42,0:255,0,144:0,15:2.0106e+02,1.9081e+02,5.6704e+01,1.5106e+02,6.9646e+01,9.9711e+01,1.7696e+02,5.0541e+00,8.3154e+01,4.0359e+01,2.2976e+02,3.7040e+00,7.7793e+01,1.3484e+02,4.3968e+01,1.5740e+02,1.4325e+02,9.6385e+01,3.5462e+01,3.1017e+01,8.4017e+01,4.0376e+02,5.4010e+01,1.0157e+02,1.5162e+02,2.0891e+02,6.9605e+01,1.0701e+02,6.9128e+01,1.5745e+01,4.0934e+01,2.7524e+01,2.8411e+01,3.5525e+01,4.6905e+01,6.3815e+00:0.00,2.00,5.00,2.00,4.00,5.00,2.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,4.00,5.00,34.77,36.77,36.77,36.77,36.77,36.77,36.77,37.77:0,1,9,9:1,0,8,10 chr2 44114303 . A . PASS END=44114303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 44114304 . G . LowGQ END=44114304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,7:35:0:35:0,0,754:100,0,255:28,0 chr2 44114348 . G . PASS END=44114348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:31,0 chr2 44114367 . C . PASS END=44114367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 44114369 . C . PASS END=44114369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:23,0 chr2 44114384 . G . PASS END=44114384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 44114587 . G . PASS END=44114587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 44114618 . C . PASS END=44114618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 44114743 . T . PASS END=44114743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 44115004 . G . PASS END=44115004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 44115072 . G . PASS END=44115072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 44115092 . C . PASS END=44115092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 44115149 . G . PASS END=44115149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 44115152 . G . PASS END=44115152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 44115162 . C . PASS END=44115162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 44115205 . C . PASS END=44115205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 44115221 . T . PASS END=44115221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 44115254 . G . PASS END=44115254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 44115283 . C . PASS END=44115283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 44115319 . G . PASS END=44115319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 44115330 . G . PASS END=44115330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 44115340 . C . PASS END=44115340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 44115396 . G . PASS END=44115396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 44115521 . T . PASS END=44115521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 44115629 . C . PASS END=44115629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr2 44115739 . T . PASS END=44115795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:88:0,120,1800:0,226,255:40,0 chr2 44116871 . A . PASS END=44116873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,138,255:40,0 chr2 44116874 . G . PASS END=44117015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,111,1698:0,111,255:40,0 chr2 44117022 . T . PASS END=44117022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 44117494 . T . PASS END=44117501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,192,255:40,0 chr2 44121684 . C . PASS END=44121768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:86:0,120,1800:0,202,255:40,0 chr2 44121774 . A . PASS END=44121774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr2 44123772 . C . PASS END=44123795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:86:0,120,1800:0,242,255:40,0 chr2 44123796 . T . PASS END=44123847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:86:0,120,1800:0,225,255:40,0 chr2 44126358 . C . PASS END=44126473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1800:0,137,255:40,0 chr2 44126604 . C . PASS END=44126744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:53:0,120,1800:0,146,255:40,0 chr2 44128459 . T . PASS END=44128639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:36:0,81,1215:0,83,255:40,0 chr2 44128640 . C . PASS END=44128649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:25,0 chr2 44128650 . T . PASS END=44128663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:21:0,51,765:0,63,255:19,0 chr2 44132825 . A . PASS END=44132825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 44132830 . C . PASS END=44132830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 44132831 . C . PASS END=44132831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 44132832 . T . PASS END=44132832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 44132833 . T . PASS END=44132851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:23,0 chr2 44132852 . C . PASS END=44132853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 44132854 . T . PASS END=44132860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,872:0,69,255:25,0 chr2 44132861 . T . PASS END=44132861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 44132862 . G . PASS END=44132862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 44132863 . A . PASS END=44132863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 44132864 . T . PASS END=44132870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:26,0 chr2 44132871 . G . PASS END=44132872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 44132873 . T . PASS END=44132891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,65,255:26,0 chr2 44132892 . T . PASS END=44132892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr2 44132893 . G . PASS END=44132896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 44132897 . A . PASS END=44132919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,554:0,40,255:19,0 chr2 44139564 . C . PASS END=44139564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,211,255:40,0 chr2 44139571 . A . PASS END=44139699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,173,255:40,0 chr2 44145152 . G . LowGQ END=44145152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,9:54:0:54:0,0,1356:76,0,255:40,0 chr2 44145162 . G . PASS END=44145162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:55:0,120,1800:0,132,255:40,0 chr2 44145164 . C . PASS END=44145183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,102,1800:0,102,255:40,0 chr2 44145184 . C . PASS END=44145272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:98:45:0,98,1755:0,98,255:40,0 chr2 44145276 . T . PASS END=44145276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr2 44145395 . C . PASS END=44145526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:39:0,86,1345:0,86,255:40,0 chr2 44145527 . A . PASS END=44145537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:32:0,66,990:0,96,255:26,0 chr2 44152206 . T . PASS END=44152217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,193,255:40,0 chr2 44152218 . G . PASS END=44152296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,212,255:40,0 chr2 44153032 . C . PASS END=44153032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,229,255:40,0 chr2 44153033 . T . PASS END=44153101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,161,255:40,0 chr2 44161328 . C . PASS END=44161435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:71:0,120,1800:0,178,255:40,0 chr2 44161893 . C . PASS END=44162000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:34:0,92,1250:0,92,255:40,1 chr2 44162001 . C . PASS END=44162018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:25:0,60,900:0,75,255:26,0 chr2 44170826 . T . PASS END=44171033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:31:0,81,1215:0,93,255:40,0 chr2 44172470 . C . PASS END=44172556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:34:0,99,1258:0,102,255:40,0 chr2 44173248 . T . PASS END=44173248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 44173252 . A . PASS END=44173383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:77:0,120,1800:0,207,255:40,0 chr2 44174396 . C . PASS END=44174509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:62:0,120,1800:0,153,255:40,0 chr2 44174870 . T . PASS END=44174914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:113:0,120,1800:0,255,255:40,0 chr2 44175250 . T . PASS END=44175250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 44175260 . C . PASS END=44175338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,149,255:40,0 chr2 44175541 . G . PASS END=44175541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr2 44175549 . A . PASS END=44175549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 44175551 . C . PASS END=44175657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:80:47:0,80,1538:0,80,255:40,0 chr2 44176736 . G . PASS END=44176736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr2 44176741 . C . PASS END=44176799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:98:44:0,98,1491:0,98,255:40,0 chr2 44176805 . A . PASS END=44176805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 44177705 . G . PASS END=44177705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr2 44177712 . C . PASS END=44177739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,199,255:40,0 chr2 44184523 . C . PASS END=44184590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,148,255:40,0 chr2 44184604 . T . PASS END=44184604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 44186346 . T . PASS END=44186359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,161,255:40,0 chr2 44187673 . T . PASS END=44187673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr2 44187680 . A . PASS END=44187689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:79:0,120,1800:0,227,255:40,0 chr2 44187690 . T . PASS END=44187773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:78:0,120,1800:0,218,255:40,0 chr2 44190700 . T . PASS END=44190845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:38:0,93,1395:0,101,255:40,0 chr2 44200741 . C . PASS END=44200741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 44200746 . C . PASS END=44200752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,142,255:40,0 chr2 44200753 . A . PASS END=44200753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:62:54:0,62,1711:0,62,255:40,5 chr2 44200754 . T . LowGQ END=44200754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:0:56:0,0,1508:23,0,255:40,5 chr2 44200755 . T . PASS END=44200755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:54:54:0,54,1760:0,54,255:40,0 chr2 44200756 . T . PASS END=44200853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,114,1676:0,114,255:40,0 chr2 44200865 . A . PASS END=44200865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr2 44200932 . A . PASS END=44200932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 44200934 . C . PASS END=44201039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,108,1620:0,112,255:40,0 chr2 44201046 . G . PASS END=44201046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,2 chr2 44201289 . C . PASS END=44201434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,101,1449:0,101,255:40,0 chr2 44201738 . T . PASS END=44201738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1150:0,85,255:32,0 chr2 44201753 . C . PASS END=44201897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:87:42:0,87,1305:0,96,255:40,0 chr2 44202228 . A . PASS END=44202228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1412:0,111,255:37,0 chr2 44202230 . C . PASS END=44202356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:37:0,93,1380:0,98,255:40,0 chr2 44203282 . C . PASS END=44203368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:28:0,84,1047:0,84,255:40,0 chr2 44204132 . C . PASS END=44204191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,206,255:40,0 chr2 44204294 . T . PASS END=44204404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:87:58:0,87,1305:0,174,255:40,0 chr2 44204405 . A . PASS END=44204410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:69:49:0,69,1035:0,109,255:25,0 chr2 44204411 . A . PASS END=44204411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:22,0 chr2 44204412 . G . PASS END=44204415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:32:0,69,1035:0,69,255:25,0 chr2 44206964 . C . PASS END=44206968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr2 44206969 . T . PASS END=44207069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,1023:0,81,255:40,0 chr2 44207070 . G . PASS END=44207087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:25,0 chr2 44209368 . T . PASS END=44209368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 44209377 . C . PASS END=44209378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 44209379 . G . PASS END=44209400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,850:0,61,255:26,0 chr2 44209401 . C . PASS END=44209406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr2 44209407 . G . PASS END=44209407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 44209408 . T . PASS END=44209439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1094:0,80,255:35,0 chr2 44209440 . G . PASS END=44209462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:34,0 chr2 44209463 . A . PASS END=44209476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,931:0,64,255:26,0 chr2 44209477 . C T, 127.80 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,15,0:0,12,0:78:166,81,0,1002,81,1002:255,81,0:0,0:1.2780e+02,7.7795e+01,0.0000e+00,4.5000e+02,1.1257e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,12:0,0,13,14 chr2 44209478 . T . PASS END=44209478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:25,0 chr2 44209479 . G . PASS END=44209481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 44209482 . T . PASS END=44209485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 44209486 . A . PASS END=44209499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr2 44209500 . A . PASS END=44209501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 44209502 . A . PASS END=44209506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44209507 . G . PASS END=44209514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr2 44209515 . C . PASS END=44209518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 44209519 . A . PASS END=44209529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,56,255:19,0 chr2 44209530 . C . PASS END=44209539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr2 44209540 . A . PASS END=44209540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 44209541 . A . PASS END=44209541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 44209542 . T . PASS END=44209556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:19,0 chr2 44209557 . C . PASS END=44209573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:11:0,30,404:0,33,255:13,0 chr2 44222913 . C . PASS END=44222914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1158:0,85,255:33,0 chr2 44222915 . G . PASS END=44222915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1119:0,55,255:32,0 chr2 44222916 . G . PASS END=44222916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1312:0,105,255:35,0 chr2 44222917 . A . PASS END=44222917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr2 44222918 . G . PASS END=44222918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1340:0,108,255:36,0 chr2 44222919 . A . PASS END=44222919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:33,0 chr2 44222920 . A . PASS END=44222929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1226:0,91,255:32,0 chr2 44222930 . G . PASS END=44222930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1304:0,70,255:32,0 chr2 44222931 . C . PASS END=44222941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1188:0,85,255:33,0 chr2 44222942 . C . PASS END=44222942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:31,0 chr2 44222943 . C . PASS END=44222943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 44222944 . A . PASS END=44222944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1135:0,71,255:32,0 chr2 44222945 . C . PASS END=44222953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1180:0,85,255:36,0 chr2 44222954 . C . PASS END=44222954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:34,0 chr2 44222955 . G . PASS END=44222959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1280:0,92,255:35,0 chr2 44222960 . C . PASS END=44222960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:34,0 chr2 44222961 . G . PASS END=44222962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 44222963 . C . PASS END=44222963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1189:0,69,255:32,0 chr2 44222964 . G . PASS END=44222973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1288:0,94,255:36,0 chr2 44222974 . G . PASS END=44222974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:34,0 chr2 44222975 . A . PASS END=44223018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1286:0,92,255:35,0 chr2 44223019 . G . PASS END=44223019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr2 44223020 . A . PASS END=44223026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1154:0,80,255:28,0 chr2 44223027 . G . PASS END=44223029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,1122:0,63,255:27,0 chr2 44223030 . G . PASS END=44223037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 44223038 . C . PASS END=44223065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,869:0,69,255:23,0 chr2 44223066 . G . PASS END=44223085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,52,255:18,0 chr2 44223086 . T . PASS END=44223086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 44223090 . T . PASS END=44223090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr2 44428339 . A . PASS END=44428340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr2 44428341 . G . PASS END=44428341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 44428342 . G . PASS END=44428366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1135:0,82,255:34,0 chr2 44428367 . C . PASS END=44428367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:32,0 chr2 44428368 . T . PASS END=44428369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1213:0,102,255:34,0 chr2 44428370 . A . PASS END=44428370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:34,0 chr2 44428371 . A . PASS END=44429182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1213:0,85,255:40,1 chr2 44429183 . A . PASS END=44429184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr2 44436349 . G . PASS END=44436466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:50:0,112,1800:0,112,255:40,0 chr2 44445082 . G . PASS END=44445205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:37:0,90,1350:0,101,255:40,0 chr2 44445206 . T . PASS END=44445206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1047:0,69,255:30,0 chr2 44445207 . C . PASS END=44445217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1263:0,86,255:33,0 chr2 44445619 . G . PASS END=44445647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,3:99:99:94:0,120,1800:0,147,255:40,0 chr2 44445648 . G . PASS END=44445676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,2:94:99:81:0,120,1800:0,199,255:40,0 chr2 44457132 . C . PASS END=44457140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:78:0,120,1800:0,221,255:40,0 chr2 44457552 . G . PASS END=44457554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1296:0,92,255:36,0 chr2 44457555 . T . PASS END=44457555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:34,0 chr2 44457556 . C . PASS END=44457699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:39:0,85,1418:0,85,255:40,0 chr2 44457700 . G . PASS END=44457700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:79:54:0,79,1522:0,79,255:40,0 chr2 44457701 . C . PASS END=44457857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:33:0,81,1213:0,81,255:40,0 chr2 44459455 . G . PASS END=44459484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,140,255:40,0 chr2 44471367 . A . PASS END=44471371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 44471372 . A . PASS END=44471372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 44471373 . G . PASS END=44471373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 44471374 . T . PASS END=44471374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 44471375 . C . PASS END=44471378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 44471379 . G . PASS END=44471379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:29,0 chr2 44471380 . G . PASS END=44471381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 44471382 . A . PASS END=44471382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 44471383 . C . PASS END=44471408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1072:0,87,255:40,0 chr2 44471409 . T G, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=-0.203;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:12,10,0:8,10,0:48:85,0,50,707,704,1411:255,0,255:21,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,4,14,6:12,8,8,12 chr2 44471410 . C . PASS END=44471446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:42:0,88,1496:0,88,255:40,0 chr2 44471447 . A . PASS END=44471549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:35:0,81,1215:0,102,255:40,0 chr2 44502610 . C . PASS END=44502610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 44502643 . G . PASS END=44502663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,192,255:40,0 chr2 44502675 . A . PASS END=44502750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,125,255:40,0 chr2 44502751 . A . PASS END=44502787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,141,255:40,0 chr2 44502788 . A C, 187.99 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,22,0:0,25,0:138:226,141,0,1772,141,1772:255,141,0:0,0:1.8799e+02,1.3799e+02,0.0000e+00,4.5000e+02,1.7276e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,33:0,0,23,24 chr2 44502789 . A . PASS END=44502825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,105,1512:0,107,255:40,0 chr2 44502826 . T . PASS END=44502865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,98,255:37,0 chr2 44502866 . C . PASS END=44502867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:54:34:0,54,810:0,102,255:18,0 chr2 44502868 . A . PASS END=44502891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,806:0,63,255:26,0 chr2 44502892 . T . PASS END=44502898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44502899 . G . PASS END=44502907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 44502908 . C . PASS END=44502913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 44502914 . C . PASS END=44502914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr2 44502915 . C . PASS END=44503032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1033:0,80,255:39,0 chr2 44503033 . A . PASS END=44503033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:31,0 chr2 44503034 . G . PASS END=44503057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,95,255:34,0 chr2 44503058 . A . PASS END=44503059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 44503060 . G . PASS END=44503066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44503067 . C . PASS END=44503091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,909:0,64,255:26,0 chr2 44503092 . G . PASS END=44503092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 44503093 . G . PASS END=44503098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 44503099 . T . PASS END=44503099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 44503100 . G . PASS END=44503104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 44503106 . T . PASS END=44503106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 44507855 . G . PASS END=44508034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:86:32:0,86,1194:0,86,255:40,0 chr2 44508526 . G . PASS END=44508680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:36:0,91,1197:0,91,255:40,0 chr2 44512779 . A . PASS END=44512788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,876:0,72,255:26,0 chr2 44512789 . T . PASS END=44512790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 44512791 . T . PASS END=44512791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 44512792 . T . PASS END=44512794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 44512795 . T . PASS END=44512797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 44512798 . C . PASS END=44512815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 44512816 . T . PASS END=44512816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 44512817 . T . PASS END=44512822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 44512823 . T . PASS END=44512823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:30,0 chr2 44512824 . C . PASS END=44512856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1118:0,83,255:33,0 chr2 44512857 . A . PASS END=44512857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1124:0,52,255:31,0 chr2 44512858 . A . PASS END=44512875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1170:0,83,255:33,0 chr2 44512876 . T . PASS END=44512876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 44512877 . A . PASS END=44512877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 44513170 . G . PASS END=44513296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:61:0,120,1800:0,155,255:40,0 chr2 44527110 . G . PASS END=44527229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:37:0,98,1382:0,98,255:40,0 chr2 44528141 . G . PASS END=44528306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:92:35:0,92,1318:0,92,255:40,0 chr2 44531253 . A . PASS END=44531446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:35:0,84,1237:0,84,255:40,0 chr2 44531447 . C . PASS END=44531477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,89,255:33,0 chr2 44531479 . T . PASS END=44531479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:25,0 chr2 44539725 . A . PASS END=44539730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr2 44539731 . G . PASS END=44539735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:29,0 chr2 44539736 . A . PASS END=44539736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 44539737 . G . PASS END=44539737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 44539738 . A . PASS END=44539738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 44539739 . C . PASS END=44539901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:88:32:0,88,1352:0,88,255:40,0 chr2 44540974 . A . PASS END=44541168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,102,1437:0,107,255:40,0 chr2 44547338 . G . PASS END=44547351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr2 44547352 . G . PASS END=44547352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 44547353 . C . PASS END=44547353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 44547354 . C . PASS END=44547355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1095:0,93,255:32,0 chr2 44547356 . A . PASS END=44547356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr2 44547357 . G . PASS END=44547368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1194:0,83,255:33,0 chr2 44547369 . A . PASS END=44547369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr2 44547370 . G . PASS END=44547536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1225:0,86,255:40,0 chr2 44547537 . A . PASS END=44547573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1221:0,89,255:39,0 chr2 44547574 . G A, 151.86 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,14,0:0,21,0:102:190,105,0,1288,105,1288:255,108,0:0,0:1.5186e+02,1.0186e+02,0.0000e+00,4.5000e+02,1.3663e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,19,16 chr2 44547575 . A . PASS END=44547623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:92:36:0,92,1340:0,92,255:40,0 chr2 44547624 . C A, 49.93 PASS DP=53;MQ=250.00;MQRankSum=6.236;ReadPosRankSum=1.432;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,26,0:0.491,0.000:53:12,9,0:15,17,0:48:85,0,50,841,958,1798:255,0,255:26,0:4.9932e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,16,7,19:12,15,16,10 chr2 44547625 . A . PASS END=44547661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,133,255:40,0 chr2 44547662 . T . PASS END=44547782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,127,255:40,0 chr2 44547878 . T . PASS END=44547878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 44547887 . A . PASS END=44547887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,223,255:40,0 chr2 44547934 . T . PASS END=44547934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr2 44548495 . T . PASS END=44548575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,128,255:40,1 chr2 44548576 . G . PASS END=44548584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,152,255:40,0 chr2 44548843 . T . PASS END=44549039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:55:0,120,1800:0,150,255:40,0 chr2 44549869 . C . PASS END=44549993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:34:0,90,1242:0,95,255:40,0 chr2 44550401 . C . PASS END=44550550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:42:0,117,1755:0,126,255:40,0 chr2 44553851 . C . PASS END=44553943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:34:0,85,1081:0,85,255:40,0 chr2 44553944 . A . PASS END=44553944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1374:0,71,255:34,0 chr2 44553945 . C . PASS END=44554017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:35:0,82,1394:0,82,255:39,0 chr2 44554018 . T . PASS END=44554018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1221:0,77,255:33,0 chr2 44554019 . A . PASS END=44554025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1189:0,102,255:34,0 chr2 44554026 . C . PASS END=44554026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:32,0 chr2 44554027 . G . PASS END=44554039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr2 44554040 . C . PASS END=44554040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1147:0,25,255:29,0 chr2 44554041 . C . PASS END=44554046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:31,0 chr2 44554047 . A . PASS END=44554052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr2 44554053 . A . PASS END=44554054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr2 44554055 . C . PASS END=44554062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 44554063 . C . PASS END=44554068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr2 44556075 . C . PASS END=44556251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:83:31:0,83,1202:0,83,255:40,0 chr2 44556260 . G . PASS END=44556260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 44559598 . C . PASS END=44559795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:87:33:0,87,1305:0,99,255:40,0 chr2 44565489 . C . PASS END=44565675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:89:43:0,89,1572:0,89,255:40,0 chr2 44566286 . C . PASS END=44566469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:81:40:0,81,1421:0,81,255:40,0 chr2 44566470 . C . PASS END=44566502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:98:45:0,98,1530:0,98,255:40,0 chr2 44569556 . C . PASS END=44569653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,118,1584:0,118,255:40,0 chr2 44569654 . G . PASS END=44569675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:50:0,84,1260:0,132,255:40,0 chr2 44569676 . T . PASS END=44569677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:78:48:0,78,1170:0,144,255:26,0 chr2 44569678 . G . PASS END=44569679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:45:47:0,45,675:0,128,255:15,0 chr2 44569680 . C . PASS END=44569686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:30:44:0,30,450:0,115,255:13,0 chr2 44569687 . C . PASS END=44569687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:21:43:0,21,315:0,129,255:7,0 chr2 44569688 . C . PASS END=44569690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:12:36:0,12,180:0,91,255:6,0 chr2 44569691 . T . PASS END=44569691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:6:36:0,6,90:0,108,255:2,0 chr2 44570884 . C . PASS END=44571090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:43:0,117,1755:0,126,255:40,0 chr2 44571659 . C . PASS END=44571725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,178,255:40,0 chr2 44573406 . C . PASS END=44573529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:51:0,120,1800:0,149,255:40,0 chr2 44573531 . T . PASS END=44573531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 44586636 . C . PASS END=44586854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,120,1800:0,135,255:40,0 chr2 44588862 . A . PASS END=44588871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:34,0 chr2 44588872 . G . PASS END=44588872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:34,0 chr2 44588873 . C . PASS END=44588903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:36:0,92,1310:0,92,255:40,0 chr2 44588904 . C . PASS END=44588940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:53:0,120,1800:0,146,255:40,0 chr2 44588941 . G A, 208.12 PASS DP=55;MQ=250.00;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,28,0:0,26,0:158:246,161,0,1945,161,1945:255,165,0:0,0:2.0812e+02,1.5812e+02,0.0000e+00,4.5000e+02,1.9289e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,24:0,0,30,24 chr2 44588942 . A . PASS END=44588978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:46:0,117,1787:0,117,255:40,0 chr2 44588979 . A . PASS END=44589031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:38:0,86,1141:0,86,255:40,0 chr2 44589032 . T . PASS END=44589032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:31,0 chr2 44589033 . C . PASS END=44589090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:35:0,81,1132:0,81,255:36,0 chr2 44589091 . C . PASS END=44589091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr2 44589092 . T . PASS END=44589175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1219:0,81,255:35,0 chr2 44589176 . C . PASS END=44589176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:28,0 chr2 44589177 . G . PASS END=44589182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,95,255:30,0 chr2 44589183 . A . PASS END=44589183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1121:0,75,255:27,0 chr2 44589184 . C . PASS END=44589192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 44589193 . C . PASS END=44589193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 44589194 . A . PASS END=44589194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:25,0 chr2 44589195 . G . PASS END=44589217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,917:0,67,255:26,0 chr2 44589218 . C . PASS END=44589225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1086:0,87,255:29,0 chr2 44589226 . C . PASS END=44589226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 44589227 . T . PASS END=44589227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 44589228 . C . PASS END=44589238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1055:0,74,255:26,0 chr2 44589239 . A . PASS END=44589240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 44589241 . T . PASS END=44589241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 44589242 . C . PASS END=44589246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 44589247 . C . PASS END=44589250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 44589251 . C . PASS END=44589251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr2 44589252 . C . PASS END=44589284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr2 44599855 . G . PASS END=44600023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:81:34:0,81,1215:0,102,255:40,0 chr2 44600024 . T . PASS END=44600027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:25,0 chr2 44617380 . G . PASS END=44617444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:75:0,120,1800:0,210,255:40,0 chr2 44619024 . A . PASS END=44619025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,208,255:40,0 chr2 44619028 . G . PASS END=44619110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:80:0,120,1800:0,224,255:40,0 chr2 44628159 . A . PASS END=44628253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:83:0,120,1800:0,219,255:40,0 chr2 44639152 . C . LowGQ END=44639157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,8:54:0:53:0,0,1106:37,0,255:40,0 chr2 44639158 . G . PASS END=44639158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,9:71:27:71:0,27,2039:0,27,255:40,0 chr2 44639159 . T . PASS END=44639159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:71:0,120,1800:0,180,255:40,0 chr2 44639160 . G . PASS END=44639160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,6:71:10:71:0,10,2009:0,10,255:40,0 chr2 44639161 . T . PASS END=44639162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,5:70:99:70:0,105,2122:0,105,255:40,0 chr2 44639163 . G . LowGQ END=44639163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,11:71:0:71:0,0,1847:20,0,255:40,0 chr2 44639164 . A . PASS END=44639165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,6:70:88:70:0,88,1800:0,88,255:40,0 chr2 44639166 . T . PASS END=44639167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,4:70:66:69:0,66,2219:0,66,255:40,0 chr2 44639168 . G . PASS END=44639168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,6:69:35:69:0,35,2133:0,35,255:40,0 chr2 44639169 . C . PASS END=44639174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,5:69:96:69:0,96,1800:0,96,255:40,0 chr2 44669080 . C . PASS END=44669111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,146,255:40,0 chr2 44670731 . T . PASS END=44670735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:101:0,120,1800:0,255,255:40,0 chr2 44683707 . G . PASS END=44683729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:105:0,120,1800:0,255,255:40,0 chr2 44702920 . T . PASS END=44702933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,241,255:40,0 chr2 44732772 . G . PASS END=44732803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,137,255:40,0 chr2 44732866 . A . PASS END=44732869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,159,255:40,0 chr2 44785027 . G . PASS END=44785115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:54:0,120,1800:0,160,255:40,0 chr2 44858630 . A . PASS END=44858649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:92:0,120,1800:0,248,255:40,0 chr2 44858650 . C . PASS END=44858664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,233,255:40,0 chr2 44931422 . G . PASS END=44931482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,108,1620:0,124,255:40,0 chr2 44933426 . G . PASS END=44933443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,120,1800:0,140,255:40,0 chr2 44933444 . G . PASS END=44933444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:58:60:0,58,1754:0,58,255:40,0 chr2 44933445 . C . PASS END=44933480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,138,255:40,0 chr2 44934538 . G . PASS END=44934576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:73:0,120,1800:0,162,255:40,0 chr2 44934577 . G . PASS END=44934601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:68:0,120,1800:0,169,255:40,0 chr2 44942426 . A . PASS END=44942492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:64:0,120,1800:0,151,255:40,0 chr2 44970761 . C . PASS END=44970835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,145,255:40,0 chr2 44974484 . A . PASS END=44974484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 44981194 . C . PASS END=44981257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:64:0,120,1800:0,162,255:40,0 chr2 44993569 . G . PASS END=44993579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,141,255:40,0 chr2 44993580 . G . PASS END=44993700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:54:0,120,1800:0,160,255:40,1 chr2 44999175 . T . PASS END=44999252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,154,255:40,0 chr2 45169242 . C . PASS END=45169242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 45169244 . A . PASS END=45169246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr2 45169247 . G . PASS END=45169247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 45169248 . T . PASS END=45169248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 45169249 . A . PASS END=45169250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 45169251 . T . PASS END=45169251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr2 45169252 . C . PASS END=45169276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr2 45169277 . T . LowGQ END=45169277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:8,0 chr2 45169278 . C . PASS END=45169285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 45169286 . T . PASS END=45169286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 45169287 . T . PASS END=45169297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 45169298 . T . LowGQ END=45169298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr2 45169299 . T . PASS END=45169305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 45169306 . T . LowGQ END=45169306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr2 45169307 . T . PASS END=45169312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,250:7,0 chr2 45169313 . C . PASS END=45169350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,164:0,15,164:6,0 chr2 45169351 . C . PASS END=45169384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,78:3,0 chr2 45169385 . A . PASS END=45169395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr2 45169396 . G . PASS END=45169398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 45169399 . C . PASS END=45169400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,172:3,0 chr2 45169401 . G . PASS END=45169414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 45169415 . G . PASS END=45169415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 45169416 . G . PASS END=45169428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr2 45169429 . A . LowGQ END=45169433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:10:0,0,257:9,0,255:10,2 chr2 45169434 . G . PASS END=45169450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr2 45169451 . T . PASS END=45169451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 45169452 . C . PASS END=45169458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr2 45169459 . C A, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=1.599;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:4,8,0:0.667,0.000:12:1,5,0:3,3,0:47:85,0,47,286,143,429:255,0,111:4,0:5.0000e+01,8.6460e-05,5.0048e+01,2.8610e+02,1.7770e+02,4.3200e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,7,1:1,3,4,4:45169459 chr2 45169460 . C . PASS END=45169470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,398:0,36,255:13,0 chr2 45169471 . G C, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=1.991;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:5,8,0:0.615,0.000:13:1,5,0:4,3,0:45:85,0,44,249,179,428:241,0,147:5,0:5.0000e+01,1.3306e-04,4.6857e+01,2.4924e+02,2.1356e+02,4.3105e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,0,6,2:1,4,3,5:45169459 chr2 45169472 . T . PASS END=45169473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 45169474 . G . PASS END=45169502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:17,0 chr2 45169503 . T . LowGQ END=45169503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,463:10,0,255:15,0 chr2 45169504 . C . PASS END=45169509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 45169510 . G . PASS END=45169515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,607:0,48,255:17,0 chr2 45169516 . G . PASS END=45169516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 45169517 . G . PASS END=45169553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,517:0,40,255:19,0 chr2 45169554 . A . PASS END=45169554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr2 45169555 . C . PASS END=45169561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 45169562 . C . PASS END=45169562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 45169563 . G . PASS END=45169575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr2 45169576 . C . PASS END=45169587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 45169588 . G . PASS END=45169590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 45169591 . C . PASS END=45169591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:18,0 chr2 45169592 . G . PASS END=45169592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 45169593 . T . PASS END=45169596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 45169597 . C . PASS END=45169597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 45169598 . C . PASS END=45169598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45169599 . C . PASS END=45169599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 45169600 . C . PASS END=45169601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,726:0,66,255:22,0 chr2 45169602 . G . PASS END=45169602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr2 45169603 . G . PASS END=45169604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45169605 . C . PASS END=45169605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 45169606 . G . PASS END=45169606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr2 45169607 . T . PASS END=45169607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 45169608 . G . PASS END=45169610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,71,255:23,0 chr2 45169611 . A . PASS END=45169611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr2 45169612 . G . PASS END=45169614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,908:0,61,255:24,0 chr2 45169615 . C . PASS END=45169615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 45169616 . A . PASS END=45169619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:25,0 chr2 45169620 . A . PASS END=45169620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:24,0 chr2 45169621 . C . PASS END=45169633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,80,255:26,0 chr2 45169634 . A . PASS END=45169637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 45169638 . T . PASS END=45169652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 45169653 . T . PASS END=45169654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 45169655 . G . PASS END=45169660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,970:0,67,255:26,0 chr2 45169661 . T . PASS END=45169661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,764:0,25,255:24,0 chr2 45169662 . T . PASS END=45169666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:25,0 chr2 45169667 . A . PASS END=45169667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:22,0 chr2 45169668 . C . PASS END=45169672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:23,0 chr2 45169673 . A . PASS END=45169673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:22,0 chr2 45169674 . A . PASS END=45169674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 45169675 . C . PASS END=45169676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:21,0 chr2 45169677 . T . PASS END=45169677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 45169678 . C . PASS END=45169679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:53:23:0,53,795:0,53,255:21,0 chr2 45169680 . G . PASS END=45169681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 45169682 . G . PASS END=45169685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 45169686 . T . PASS END=45169686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:16,0 chr2 45169687 . C . PASS END=45169693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,654:0,46,255:18,0 chr2 45169694 . A . PASS END=45169695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:19:0,26,604:0,26,255:17,0 chr2 45169696 . C . PASS END=45169702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,617:0,40,255:19,0 chr2 45169703 . A . PASS END=45169703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,552:0,18,255:17,0 chr2 45169704 . A . PASS END=45169731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,532:0,40,255:18,0 chr2 45169732 . C . PASS END=45169735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:15,0 chr2 45169736 . C . PASS END=45169745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 45169746 . T . PASS END=45169750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 45169751 . C . PASS END=45169751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 45169752 . T . PASS END=45169758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 45169759 . G . PASS END=45169759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 45169760 . C . PASS END=45169780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,429:0,32,255:13,0 chr2 45169781 . C . PASS END=45169781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 45169782 . T . PASS END=45169782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:13,0 chr2 45169783 . G . PASS END=45169787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 45169788 . G . PASS END=45169788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 45169789 . C . PASS END=45169795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr2 45169796 . C . PASS END=45169796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 45169797 . T . PASS END=45169832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:17,0 chr2 45169833 . T . PASS END=45169834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 45169835 . C . PASS END=45169850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr2 45169851 . T . PASS END=45169851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:16,0 chr2 45169852 . C . PASS END=45169939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,615:0,48,255:19,0 chr2 45169940 . C . PASS END=45169940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 45169941 . C . PASS END=45169976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:18,0 chr2 45169977 . T . PASS END=45170007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,344:0,33,255:13,0 chr2 45170008 . G . PASS END=45170035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,304:0,27,255:9,0 chr2 45170036 . G . PASS END=45170036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 45170037 . C . PASS END=45170041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 45170042 . A . PASS END=45170049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 45171707 . G . PASS END=45171713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 45171714 . C . PASS END=45171720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 45171721 . C . PASS END=45171725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 45171726 . G . PASS END=45171762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,535:0,41,255:19,0 chr2 45171763 . G . PASS END=45171770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 45171771 . C . PASS END=45171771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 45171772 . A . PASS END=45171790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,768:0,63,255:24,0 chr2 45171791 . G . PASS END=45171791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 45171792 . T . PASS END=45171795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 45171796 . C . PASS END=45171796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 45171797 . G . PASS END=45171803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 45171804 . A . PASS END=45171804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 45171805 . G . PASS END=45171824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,886:0,61,255:24,0 chr2 45171825 . A . PASS END=45171825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:20,0 chr2 45171826 . G . PASS END=45171833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 45171834 . G . PASS END=45171834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:21,0 chr2 45171835 . A . PASS END=45171838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr2 45171839 . C . PASS END=45171839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 45171840 . G . PASS END=45171840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 45171841 . C . PASS END=45171841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 45171842 . A G, 112.27 PASS DP=23;MQ=249.21;FractionInformativeReads=0.957 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,9,0:0,13,0:62:150,65,0,250,250,250:255,69,0:0,0:1.1227e+02,6.2266e+01,2.5886e-06,2.4704e+02,2.8181e+02,2.5005e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,9:0,0,14,8 chr2 45171843 . G . PASS END=45171854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 45171855 . T . PASS END=45171855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 45171856 . C . PASS END=45171857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 45171858 . A . PASS END=45171858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 45171859 . T . PASS END=45171859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:20,0 chr2 45171860 . C . PASS END=45171879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,49,255:19,0 chr2 45171880 . A . PASS END=45171880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 45171881 . C . PASS END=45171881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr2 45171882 . T . PASS END=45171893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 45171894 . G . PASS END=45171899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 45233309 . C . PASS END=45233311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:22,0 chr2 45233312 . G . PASS END=45233312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 45233313 . G . PASS END=45233388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,808:0,66,255:26,0 chr2 45233389 . C . PASS END=45233389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 45233390 . C . PASS END=45233392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 45233393 . T . PASS END=45233413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 45233414 . C . PASS END=45233416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 45233417 . T . PASS END=45233418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 45233419 . G . PASS END=45233419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 45233420 . C . PASS END=45233420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 45233421 . A . PASS END=45233427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 45233428 . T . PASS END=45233430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 45233431 . G . PASS END=45233469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 45233470 . C . PASS END=45233476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 45233477 . C . PASS END=45233481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 45233482 . G . PASS END=45233482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr2 45233483 . G . PASS END=45233483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 45233484 . C . PASS END=45233487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 45233488 . G . PASS END=45233489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 45233490 . A . PASS END=45233490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 45233491 . G . PASS END=45233508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1178:0,83,255:32,0 chr2 45233509 . A . PASS END=45233510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1094:0,77,255:27,0 chr2 45233511 . G . PASS END=45233520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 45233521 . G . PASS END=45233523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 45233524 . T . PASS END=45233524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:25,0 chr2 45233525 . C . PASS END=45233535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,984:0,65,255:26,0 chr2 45233536 . T . PASS END=45233536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:24,0 chr2 45233537 . C . PASS END=45233537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 45233538 . T . PASS END=45233567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr2 45233568 . T . PASS END=45233568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 45233569 . T . PASS END=45233576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 45233577 . C . PASS END=45233577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 45233578 . C . PASS END=45233582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 45233583 . A . PASS END=45233589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 45233590 . T . PASS END=45233596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:21,0 chr2 45233597 . G . PASS END=45233597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 45233598 . T . PASS END=45233601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,0 chr2 45233602 . A . PASS END=45233602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr2 45233603 . A . PASS END=45233603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 45233604 . T . PASS END=45233604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 45233605 . T . PASS END=45233607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 45233608 . A . PASS END=45233624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,46,255:19,0 chr2 45235684 . T . PASS END=45235692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr2 45235693 . T . PASS END=45235694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 45235695 . C . PASS END=45235719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:26:0,71,978:0,71,255:26,0 chr2 45235720 . T . PASS END=45235720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 45235721 . G . PASS END=45235721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:25,0 chr2 45235722 . C . PASS END=45235722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 45235723 . C . PASS END=45235723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 45235724 . G . PASS END=45235727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 45235728 . G . PASS END=45235743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,886:0,64,255:26,0 chr2 45235744 . C . PASS END=45235750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,59,255:20,0 chr2 45235751 . G . PASS END=45235779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:23,0 chr2 45235780 . A . PASS END=45235790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 45235791 . C . PASS END=45235792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 45235793 . C . PASS END=45235798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,810:0,53,255:19,0 chr2 45235799 . G . PASS END=45235801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 45235802 . A . PASS END=45235889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:18,0 chr2 45235890 . G . PASS END=45235901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr2 45235902 . C . PASS END=45235902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 45235903 . G . PASS END=45235933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr2 45235934 . C . PASS END=45235953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 45235954 . C . PASS END=45235968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr2 45235969 . T . PASS END=45235972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr2 45235973 . T . PASS END=45235973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 45235974 . G . PASS END=45235994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 45235995 . C . PASS END=45236023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 45236024 . A . PASS END=45236034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:11,0 chr2 45236035 . C . PASS END=45236036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 45236037 . C . PASS END=45236037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 45236038 . T . PASS END=45236038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 45236039 . C . PASS END=45236039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 45236040 . C . PASS END=45236043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 45236044 . A . PASS END=45236046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 45236047 . T . PASS END=45236047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 45236048 . T . PASS END=45236048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 45236049 . G . PASS END=45236049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 45236050 . T . PASS END=45236065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 45236066 . T . PASS END=45236066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 45236067 . G . PASS END=45236140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr2 45236141 . G . PASS END=45236141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 45236142 . C . PASS END=45236160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 45236161 . A . PASS END=45236161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 45236162 . G . PASS END=45236170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr2 45236171 . T . PASS END=45236177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 45236178 . G . PASS END=45236178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 45236179 . C . PASS END=45236226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr2 45236227 . C . PASS END=45236236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 45236237 . G . PASS END=45236237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,255:3,0 chr2 45236238 . C . PASS END=45236239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr2 45236240 . G . PASS END=45236240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr2 45236241 . C . PASS END=45236249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:5,0 chr2 45616449 . T . PASS END=45616451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr2 45616452 . T . PASS END=45616452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 45616453 . A . PASS END=45616465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,823:0,61,255:26,0 chr2 45616466 . G . PASS END=45616467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr2 45616468 . T . PASS END=45616468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 45616469 . C . PASS END=45616726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:29:0,87,1050:0,87,255:40,0 chr2 45616727 . G . PASS END=45616728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1033:0,76,255:28,0 chr2 45616729 . T . PASS END=45616735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 45616736 . A . PASS END=45616736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 45616737 . A . PASS END=45616738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 45620084 . C . PASS END=45620268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,99,1485:0,104,255:40,0 chr2 45640253 . C . PASS END=45640336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:43:0,120,1800:0,129,255:40,0 chr2 45640337 . C . PASS END=45640373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,194,255:40,0 chr2 45640374 . C A, 50.00 PASS DP=74;MQ=250.00;MQRankSum=7.261;ReadPosRankSum=1.822;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,44,0:0.595,0.000:74:16,23,0:14,21,0:47:85,0,47,1543,1056,2606:255,0,255:24,0:5.0000e+01,8.8272e-05,4.9870e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,18,26:18,12,27,17 chr2 45640375 . G . PASS END=45640411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,131,255:40,0 chr2 45640412 . C . PASS END=45640432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,102,1530:0,134,255:40,0 chr2 45645504 . C . PASS END=45645511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1194:0,96,255:32,0 chr2 45645512 . C T, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.724;ReadPosRankSum=2.352;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,16,0:0.516,0.000:31:8,10,0:7,6,0:48:85,0,50,572,537,1109:255,0,255:16,0:5.0000e+01,6.5492e-05,5.2928e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,3,11,5:9,6,11,5 chr2 45645513 . G . PASS END=45645516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1156:0,83,255:31,0 chr2 45645517 . G . PASS END=45645517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:29,0 chr2 45645518 . G . PASS END=45645530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1258:0,94,255:39,0 chr2 45645531 . T . PASS END=45645531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1159:0,70,255:37,0 chr2 45645532 . T . PASS END=45645549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,107,1498:0,107,255:40,0 chr2 45645550 . C . PASS END=45645643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:52:0,120,1800:0,140,255:40,0 chr2 45645644 . A . PASS END=45645644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,7:60:64:60:0,64,1840:0,64,255:40,1 chr2 45645645 . T . PASS END=45645676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:83:40:0,83,1395:0,83,255:40,1 chr2 45645677 . A . PASS END=45645677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:20:40:0,20,1076:0,20,255:26,0 chr2 45645678 . T . PASS END=45645680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,98,255:30,0 chr2 45646927 . C . PASS END=45647005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,124,255:40,0 chr2 45647006 . C . PASS END=45647033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:37:0,95,1341:0,95,255:40,0 chr2 45704132 . C . PASS END=45704214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,167,255:40,0 chr2 45715379 . C . PASS END=45715437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:36:0,92,1258:0,92,255:40,0 chr2 45715438 . C . PASS END=45715438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1441:0,76,255:32,0 chr2 45715439 . T . PASS END=45715470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1209:0,86,255:35,0 chr2 45773456 . C . PASS END=45773473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,210,255:40,0 chr2 45773474 . A . PASS END=45773499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:81:0,120,1800:0,208,255:40,0 chr2 45773871 . C . PASS END=45773978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:49:0,120,1800:0,143,255:40,0 chr2 45774661 . T . PASS END=45774751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,117,1755:0,119,255:40,0 chr2 45778264 . T . PASS END=45778265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 45778266 . G . PASS END=45778266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 45778267 . T . PASS END=45778272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 45778273 . A . PASS END=45778279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr2 45778280 . A . PASS END=45778281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 45778282 . C . PASS END=45778282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 45778283 . T . PASS END=45778284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 45778285 . A . PASS END=45778286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr2 45778287 . T . PASS END=45778287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 45778288 . T . PASS END=45778288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 45778289 . G . PASS END=45778294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,747:0,63,255:24,0 chr2 45778295 . A . PASS END=45778295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 45778296 . T . PASS END=45778316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,909:0,72,255:26,0 chr2 45778317 . C . PASS END=45778348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:27:0,80,995:0,80,255:30,0 chr2 45778349 . T . PASS END=45778349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:27,0 chr2 45778350 . A . PASS END=45778353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 45778354 . G . PASS END=45778356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 45778357 . G . PASS END=45778357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 45778358 . C . PASS END=45778381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr2 45778382 . C . PASS END=45778404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 45778405 . C . PASS END=45778410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 45778411 . T . PASS END=45778415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 45778416 . T . PASS END=45778416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 45778417 . T . PASS END=45778421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 45780762 . C . PASS END=45780869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,118,1576:0,118,255:40,0 chr2 45789792 . C . PASS END=45789895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:52:0,120,1800:0,140,255:40,0 chr2 45800346 . C . PASS END=45800481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,120,1800:0,134,255:40,0 chr2 45801766 . A . PASS END=45801862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:53:0,114,1710:0,129,255:40,0 chr2 45807014 . C . PASS END=45807014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr2 45807015 . T . PASS END=45807015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 45807016 . T . PASS END=45807016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr2 45807017 . T . PASS END=45807017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1033:0,41,255:30,0 chr2 45807018 . A . PASS END=45807152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1156:0,89,255:40,0 chr2 45808832 . C . PASS END=45808949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:36:0,90,1310:0,92,255:40,0 chr2 45812747 . C . PASS END=45812913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,117,1755:0,122,255:40,0 chr2 45826588 . C . PASS END=45826941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:35:0,80,1260:0,80,255:40,0 chr2 45826942 . T . PASS END=45826947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:33:0,60,1080:0,60,255:30,0 chr2 45826948 . A . PASS END=45826949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:23,0 chr2 45826950 . T . PASS END=45826951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,96,255:21,0 chr2 45826952 . T . PASS END=45826953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:21,0 chr2 45826954 . A . PASS END=45826954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,96,255:21,0 chr2 45826955 . G . PASS END=45826955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:22,0 chr2 45826956 . C . PASS END=45826957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:30:0,65,990:0,65,255:22,0 chr2 45826958 . A . PASS END=45826958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr2 45826959 . T . PASS END=45826959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 45826960 . A . PASS END=45826962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 45826963 . C . PASS END=45826963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 45826964 . A . PASS END=45826967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:21,0 chr2 45826968 . A . PASS END=45826969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 45826970 . C . PASS END=45826971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 45826972 . A . PASS END=45826974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,722:0,30,255:18,0 chr2 45829042 . C . PASS END=45829062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1211:0,91,255:36,0 chr2 45829063 . G . PASS END=45829063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1226:0,77,255:34,0 chr2 45829064 . A . PASS END=45829077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1346:0,95,255:40,0 chr2 45829078 . A . PASS END=45829078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1424:0,74,255:38,0 chr2 45829079 . C . PASS END=45829175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,90,255:40,0 chr2 45829176 . G . PASS END=45829181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:22,0 chr2 45829182 . A . PASS END=45829196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:17:0,41,673:0,41,255:19,0 chr2 45829197 . T . PASS END=45829197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 45829198 . G . PASS END=45829218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,552:0,48,255:17,0 chr2 45829219 . T . PASS END=45829222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr2 45832501 . A . PASS END=45832580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,143,255:40,0 chr2 45876479 . T . PASS END=45876522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,116,1612:0,116,255:40,0 chr2 45877092 . C . PASS END=45877096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45877097 . T . PASS END=45877097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr2 45877098 . A . PASS END=45877101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 45877102 . A . PASS END=45877102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 45877103 . C . PASS END=45877104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 45877105 . A . PASS END=45877106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,585:0,46,255:20,0 chr2 45877107 . T . PASS END=45877113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 45877114 . A . PASS END=45877114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 45877115 . C . PASS END=45877121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:21,0 chr2 45877122 . T . PASS END=45877122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 45877123 . G . PASS END=45877124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 45877125 . C . PASS END=45877125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 45877126 . A . PASS END=45877126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 45877127 . G . PASS END=45877128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 45877129 . A . PASS END=45877132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 45877133 . C . PASS END=45877133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr2 45877134 . G . PASS END=45877145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:24,0 chr2 45877146 . T . PASS END=45877146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr2 45877147 . T . PASS END=45877164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,733:0,61,255:26,0 chr2 45877165 . A . PASS END=45877165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:24,0 chr2 45877166 . A . PASS END=45877174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:23,0 chr2 45877175 . T . PASS END=45877175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,782:0,6,255:21,0 chr2 45877176 . C . PASS END=45877176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 45877177 . C . PASS END=45877177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 45877178 . C . PASS END=45877222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,847:0,62,255:26,0 chr2 45877223 . T . PASS END=45877295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1169:0,80,255:33,0 chr2 45877296 . C . PASS END=45877296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 45877297 . A . PASS END=45877299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:31,0 chr2 45877300 . C . PASS END=45877300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1186:0,71,255:29,0 chr2 45877301 . C . PASS END=45877313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 45877314 . C . PASS END=45877314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:28,0 chr2 45877315 . G . PASS END=45877320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 45877321 . G . PASS END=45877322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 45877323 . C . PASS END=45877325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr2 45877326 . G . PASS END=45877330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1076:0,74,255:26,0 chr2 45877331 . C . PASS END=45877351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr2 45877352 . C . PASS END=45877357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 45877358 . C . PASS END=45877367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,76,255:26,0 chr2 45877368 . T G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.604;ReadPosRankSum=2.176;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,17,0:0.567,0.000:30:4,8,0:9,9,0:48:85,0,49,608,456,1064:255,0,255:8,0:5.0000e+01,7.1964e-05,5.1837e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,5,10,7:7,6,9,8 chr2 45877369 . C . PASS END=45877375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,77,255:23,0 chr2 45877376 . T . PASS END=45877376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:11:25:0,11,781:0,11,255:20,0 chr2 45877377 . G . PASS END=45877379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 45877380 . C . PASS END=45877380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 45877381 . A . PASS END=45877381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,699:0,39,255:20,0 chr2 45877382 . G . PASS END=45877385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 45877386 . C . PASS END=45877387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 45877388 . G . PASS END=45877405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr2 45877406 . A . PASS END=45877420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:24,0 chr2 45877421 . G . PASS END=45877421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 45877422 . A . PASS END=45877423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 45877424 . G . PASS END=45877424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:21,0 chr2 45877425 . A . PASS END=45877425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 45877426 . A . PASS END=45877427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 45877428 . T . PASS END=45877429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 45877430 . A . PASS END=45877430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,718:0,19,255:18,0 chr2 45877431 . G . PASS END=45877431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 45877432 . C . PASS END=45877432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 45877433 . A . PASS END=45877444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,53,255:19,0 chr2 45877445 . A . PASS END=45877445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,728:0,19,255:16,0 chr2 45877446 . C . PASS END=45877446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:17,0 chr2 45877447 . T . PASS END=45877447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:17,0 chr2 45877448 . C . PASS END=45877465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,668:0,44,255:19,0 chr2 45877466 . C . PASS END=45877467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 45877468 . C . PASS END=45877508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr2 45877509 . T . PASS END=45877509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 45877510 . C . PASS END=45877510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 45877511 . A . PASS END=45877511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:18,0 chr2 45877512 . G . PASS END=45877518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 45877519 . A . PASS END=45877525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:22,0 chr2 45877526 . C . PASS END=45877526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 45877527 . A . PASS END=45877533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 45877534 . C . PASS END=45877534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 45877535 . A . PASS END=45877552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:22:0,65,784:0,65,255:26,0 chr2 45877553 . A . PASS END=45877553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,748:0,58,255:22,0 chr2 45877554 . A . PASS END=45877555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 45877556 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=1.635;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:5,10,0:7,5,0:48:85,0,49,528,429,957:255,0,255:11,0:5.0000e+01,6.9116e-05,5.2275e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,9,7,8:6,6,8,7 chr2 45877557 . A . PASS END=45877559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 45877560 . A . PASS END=45877563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 45877564 . G . PASS END=45877564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:26,0 chr2 45877565 . T . PASS END=45877568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 45877569 . T . PASS END=45877569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,836:0,64,255:26,0 chr2 45877570 . T . PASS END=45877577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,926:0,84,255:29,0 chr2 45877578 . A . PASS END=45877578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 45877579 . A . PASS END=45877580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 45877581 . A . PASS END=45877581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr2 45877582 . A . PASS END=45877593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1040:0,80,255:29,0 chr2 45877594 . A . PASS END=45877603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 45877604 . G . PASS END=45877604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 45877605 . G . PASS END=45877623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1041:0,83,255:29,0 chr2 45877624 . T . PASS END=45877627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 45877628 . A . PASS END=45877630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:28,0 chr2 45877631 . A . PASS END=45877648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,771:0,84,255:29,0 chr2 45877649 . A . PASS END=45877660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:27:0,66,990:0,74,255:25,0 chr2 45877661 . G T, 46.68 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.171;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:7,10,0:8,2,0:46:81,0,50,353,536,889:255,0,255:15,0:4.6683e+01,1.1494e-04,5.3000e+01,3.5291e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,1,11:8,7,3,9 chr2 45877662 . A . PASS END=45877679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,846:0,72,255:24,0 chr2 45877680 . T . PASS END=45877680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 45877681 . C . PASS END=45877696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 45877697 . G . PASS END=45877698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 45877699 . G . PASS END=45877704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 45877705 . A . PASS END=45877708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 45877709 . G . PASS END=45877709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 45877710 . A . PASS END=45877710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:17,0 chr2 45877711 . G . PASS END=45877728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:18,0 chr2 45877729 . G . PASS END=45877732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr2 45877733 . T . PASS END=45877734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 45877735 . C . PASS END=45877735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr2 45877736 . T . PASS END=45877736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 45877737 . T . PASS END=45877738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 45877739 . T . PASS END=45877740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 45877741 . C . PASS END=45877743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,490:0,31,255:13,0 chr2 45877744 . C . PASS END=45877744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr2 45877745 . C . PASS END=45877749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr2 45877750 . T . PASS END=45877751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr2 45877752 . C . PASS END=45877755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 45877756 . T . PASS END=45877756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 45877757 . C . PASS END=45877764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr2 45877765 . G . PASS END=45877765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 45877766 . C . PASS END=45877777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 45877778 . G . PASS END=45877778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 45877779 . C . PASS END=45877783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 45877784 . C . PASS END=45877784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 45877785 . G . PASS END=45877787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 45877788 . A . PASS END=45877788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 45877789 . C . PASS END=45877791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 45877792 . A . LowGQ END=45877792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:9,0 chr2 45877793 . G . PASS END=45877818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 45877819 . A . PASS END=45877819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 45877820 . C . PASS END=45877851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:11,0 chr2 45877852 . G . PASS END=45877854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 45877855 . C . PASS END=45877856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 45877857 . A . PASS END=45877858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 45877859 . G . PASS END=45877860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 45877861 . A . PASS END=45877861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 45877862 . A . PASS END=45877868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr2 45877869 . C . PASS END=45877869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 45877870 . G . PASS END=45877870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 45877871 . A . PASS END=45877874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 45877875 . C . PASS END=45877882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 45877883 . C . PASS END=45877883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 45877884 . A . PASS END=45877888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 45877889 . G . PASS END=45877889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 45877890 . G . PASS END=45877913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr2 45877914 . G . PASS END=45877914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 45877915 . C . PASS END=45877915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 45877916 . T . PASS END=45877916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr2 45877917 . C . PASS END=45877970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,243:0,24,243:9,0 chr2 45877971 . C . LowGQ END=45877971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:7,0 chr2 45877972 . C . PASS END=45877988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 45877989 . G . PASS END=45877989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 45877990 . G . PASS END=45877995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 45877996 . G . PASS END=45877996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 45877997 . G . PASS END=45878002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 45878003 . G . PASS END=45878037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,13,225:6,0 chr2 45878038 . G . PASS END=45878039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,247:0,21,247:7,0 chr2 45878040 . G . LowGQ END=45878040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr2 45878041 . C . PASS END=45878042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 45878043 . G . PASS END=45878048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 45878049 . C . LowGQ END=45878049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:5,0 chr2 45878050 . C . PASS END=45878051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 45878052 . C . PASS END=45878086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,272:0,24,255:9,0 chr2 45878087 . G . PASS END=45878087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 45878088 . C . PASS END=45878094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 45878095 . G . PASS END=45878095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 45878096 . C . PASS END=45878105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 45878106 . A . PASS END=45878107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 45878108 . C . PASS END=45878108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 45878109 . G . PASS END=45878109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 45878110 . T . PASS END=45878110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr2 45878111 . T . PASS END=45878118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 45878119 . C . PASS END=45878119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 45878120 . G . PASS END=45878142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr2 45878143 . C T, 0.08 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:2,0,0:4,1,0:17:18,0,50,36,214,250:12,0,239:7,0:8.4863e-02,1.7134e+01,7.0134e+01,5.2913e+01,2.6624e+02,2.7024e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,1,0:4,2,0,1 chr2 45878144 . C . PASS END=45878144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 45878145 . C . PASS END=45878145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 45878146 . C . PASS END=45878147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 45878148 . A . PASS END=45878148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 45878149 . C . PASS END=45878154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 45878155 . A . LowGQ END=45878155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:6,0 chr2 45878156 . A . PASS END=45878163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 45878164 . A . LowGQ END=45878164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:6,0 chr2 45878165 . T . PASS END=45878170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 45878171 . C . PASS END=45878171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 45878172 . A . PASS END=45878173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 45878174 . A . PASS END=45878174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:5,0 chr2 45878175 . C . PASS END=45878184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:8:0,10,180:0,10,243:6,0 chr2 45878185 . C . LowGQ END=45878185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,4:9:0:9:0,0,83:76,0,159:4,0 chr2 45878186 . G . PASS END=45878186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 45878187 . C . LowGQ END=45878187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:6,0 chr2 45878188 . G . PASS END=45878188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 45878189 . C . LowGQ END=45878189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr2 45878190 . G . PASS END=45878197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:9:0,10,233:0,10,233:7,0 chr2 45878198 . G . LowGQ END=45878198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:7,0 chr2 45878199 . C . PASS END=45878199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr2 45878200 . A . PASS END=45878201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr2 45878202 . A . LowGQ END=45878203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:10:0,0,277:3,0,255:7,0 chr2 45878204 . A . PASS END=45878204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 45878205 . C . LowGQ END=45878205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:6,0 chr2 45878206 . A . PASS END=45878206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 45878207 . C . PASS END=45878207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:7,0 chr2 45878208 . A . PASS END=45878210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:8,0 chr2 45878289 . C . PASS END=45878320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr2 45878321 . G . PASS END=45878323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 45878324 . C . PASS END=45878346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 45878347 . A . PASS END=45878356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 45878357 . G A, 0.08 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=0.875;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:4,1,0:2,0,0:17:18,0,50,36,212,248:18,0,181:5,0:8.4720e-02,1.7141e+01,7.0141e+01,5.2913e+01,2.6390e+02,2.6790e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,0,1:5,1,0,1 chr2 45878358 . G . PASS END=45878368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:6,0 chr2 45878369 . A . LowDepth;LowGQ END=45878444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,16:3,0 chr2 45878445 . G . LowDepth END=45878454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr2 45878455 . G . PASS END=45878475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:9,0 chr2 45878476 . C . PASS END=45878476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 45878477 . C . PASS END=45878494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 45878495 . G . PASS END=45878495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 45878496 . A . PASS END=45878496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 45878497 . C . LowGQ END=45878497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr2 45878498 . T . PASS END=45878498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr2 45878499 . C . PASS END=45878499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 45878500 . C . PASS END=45878508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 45878509 . G . PASS END=45878509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 45878510 . C . PASS END=45878514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr2 45878515 . G . PASS END=45878521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 45878522 . T . PASS END=45878522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 45878523 . C . PASS END=45878524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 45878525 . G . PASS END=45878525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 45878526 . G . PASS END=45878568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr2 45878569 . T . PASS END=45878570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr2 45878571 . C . PASS END=45878571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 45878572 . G . PASS END=45878580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 45878581 . G . PASS END=45878582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 45878583 . G . PASS END=45878584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 45878585 . C . PASS END=45878589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 45878590 . C . PASS END=45878590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 45878591 . C . PASS END=45878594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 45878595 . T . PASS END=45878598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 45878599 . C . LowGQ END=45878599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:5,0 chr2 45878600 . G . PASS END=45878600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 45878601 . T . LowGQ END=45878601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:5,0 chr2 45878602 . G . PASS END=45878605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 45878681 . A . PASS END=45878683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 45878684 . C . PASS END=45878684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 45878685 . C . PASS END=45878688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr2 45878689 . G . PASS END=45878689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 45878690 . T . PASS END=45878695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,464:0,39,255:13,0 chr2 45878696 . C . PASS END=45878699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 45878700 . C . PASS END=45878703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 45878704 . C . PASS END=45878705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 45878706 . G . PASS END=45878711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr2 45878712 . T . PASS END=45878712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:15,0 chr2 45878713 . C . PASS END=45878713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 45878714 . A . PASS END=45878714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 45878715 . G . PASS END=45878716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 45878717 . G . PASS END=45878717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 45878718 . G . PASS END=45878718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 45878719 . C . PASS END=45878719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 45878720 . A . PASS END=45878722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 45878723 . C . PASS END=45878742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,724:0,63,255:22,0 chr2 45878743 . T . PASS END=45878744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 45878745 . C . PASS END=45878745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45878746 . G . PASS END=45878746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 45878747 . G . PASS END=45878748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 45878749 . T . PASS END=45878749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:19,0 chr2 45878750 . T . PASS END=45878750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 45878751 . G . PASS END=45878752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 45878753 . A . PASS END=45878757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 45878758 . G . PASS END=45878758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 45878759 . C . PASS END=45878759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 45878760 . G T, 47.29 PASS DP=19;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=3.507;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:5,4,0:7,3,0:46:82,0,50,250,400,651:250,0,255:12,0:4.7293e+01,1.0277e-04,5.3000e+01,2.5033e+02,4.3531e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,2,5:6,6,5,2 chr2 45878761 . C . PASS END=45878762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 45878763 . C . PASS END=45878763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 45878764 . C . PASS END=45878768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:21,0 chr2 45878769 . T . PASS END=45878769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,625:0,46,255:19,0 chr2 45878770 . C . PASS END=45878770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 45878771 . T . PASS END=45878778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 45878779 . G . PASS END=45878779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,570:0,32,255:17,0 chr2 45878780 . C . PASS END=45878783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr2 45878784 . G . PASS END=45878797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,609:0,43,255:19,0 chr2 45878798 . T . PASS END=45878801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,586:0,40,255:16,0 chr2 45878802 . C . PASS END=45878802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 45878803 . C . PASS END=45878803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 45878804 . T . LowGQ END=45878804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,363:15,0,255:12,0 chr2 45878805 . C . PASS END=45878807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 45878808 . G . PASS END=45878808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,466:0,31,255:15,0 chr2 45878809 . G . PASS END=45878809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:16,0 chr2 45878810 . A . LowGQ END=45878810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,313:2,0,255:12,0 chr2 45878811 . G . PASS END=45878811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 45878812 . T . PASS END=45878812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 45878813 . C . PASS END=45878815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr2 45878816 . A . PASS END=45878819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 45878820 . T . PASS END=45878820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 45878821 . C . LowGQ END=45878821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,354:8,0,255:14,0 chr2 45878822 . C . PASS END=45878823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr2 45878824 . G . PASS END=45878824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,462:0,17,255:15,0 chr2 45878825 . G . PASS END=45878825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 45878826 . G . PASS END=45878826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 45878827 . A . PASS END=45878827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,490:0,21,255:15,0 chr2 45878828 . T . PASS END=45878828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 45878829 . T . PASS END=45878831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:15,0 chr2 45878832 . G . PASS END=45878838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,584:0,40,255:17,0 chr2 45878839 . A . PASS END=45878839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr2 45878840 . A . PASS END=45878842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,623:0,43,255:18,0 chr2 45878843 . G . PASS END=45878843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 45878844 . T . PASS END=45878845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:22:0,30,745:0,30,255:20,0 chr2 45878846 . G . PASS END=45878855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr2 45878856 . G . PASS END=45878856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 45878857 . G . PASS END=45878868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 45878869 . G . PASS END=45878869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 45878870 . C . PASS END=45878898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:22:0,60,748:0,61,255:26,0 chr2 45878899 . G . PASS END=45878899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 45878900 . C . PASS END=45878931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:24,0 chr2 45878932 . C . PASS END=45878932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:22,0 chr2 45878933 . G . PASS END=45878952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,842:0,72,255:25,0 chr2 45878953 . T . PASS END=45878953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:23,0 chr2 45878954 . C . PASS END=45878965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 45878966 . C . PASS END=45878966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:21,0 chr2 45878967 . A . PASS END=45878967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 45878968 . G . PASS END=45878968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 45878969 . C . PASS END=45878973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 45878974 . G . PASS END=45878974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 45878975 . G . PASS END=45878980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 45878981 . G . PASS END=45879006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,615:0,44,255:19,0 chr2 45879007 . A . PASS END=45879007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 45879008 . T . PASS END=45879013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 45879014 . A . PASS END=45879014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 45879015 . G . PASS END=45879018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:14,0 chr2 45879019 . T . PASS END=45879019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 45879020 . C . PASS END=45879030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 45879031 . G . PASS END=45879031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 45879032 . T . PASS END=45879050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,531:0,48,255:16,0 chr2 45879051 . C . PASS END=45879051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 45879052 . G . PASS END=45879052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 45879053 . A . PASS END=45879055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 45879056 . A . PASS END=45879056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 45879057 . A . PASS END=45879058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 45879059 . T . PASS END=45879060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 45879061 . C . PASS END=45879061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr2 45879062 . A . PASS END=45879063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 45879064 . G . PASS END=45879064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr2 45879065 . C . PASS END=45879066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 45879067 . C . PASS END=45879067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 45879068 . T . PASS END=45879081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 45879082 . C . PASS END=45879091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 45879092 . G . PASS END=45879103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:16,0 chr2 45879104 . A . PASS END=45879108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,48,255:13,0 chr2 45879109 . G . PASS END=45879110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 45879111 . A . PASS END=45879117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:14:0,39,585:0,42,255:13,0 chr2 45879118 . G . PASS END=45879118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 45879119 . T . PASS END=45879119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 45879120 . G . PASS END=45879139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 45879140 . A . PASS END=45879186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,382:0,36,255:13,0 chr2 45879240 . A . PASS END=45879253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 45879254 . T . PASS END=45879254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr2 45879255 . G . PASS END=45879256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 45879257 . C . PASS END=45879257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 45879258 . C . PASS END=45879275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 45879276 . T . PASS END=45879276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 45879277 . G . PASS END=45879300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 45879301 . C . PASS END=45879302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 45879303 . G . PASS END=45879309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 45879310 . C . PASS END=45879313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 45879314 . G . PASS END=45879345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 45879346 . T . PASS END=45879346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 45879347 . C . PASS END=45879355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:12,0 chr2 45879356 . C . PASS END=45879372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:19,0 chr2 45879373 . A . PASS END=45879398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr2 45879399 . A . PASS END=45879399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 45879400 . C . PASS END=45879400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 45879401 . G . PASS END=45879401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 45879402 . G . PASS END=45879416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 45879417 . A . PASS END=45879417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 45879418 . C . PASS END=45879427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,914:0,72,255:24,0 chr2 45879428 . G . PASS END=45879428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 45879429 . G . PASS END=45879430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 45879431 . C . PASS END=45879431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,890:0,39,255:25,0 chr2 45879432 . T . PASS END=45879437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr2 45879438 . G . PASS END=45879442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 45879443 . G . PASS END=45879443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 45879444 . T . PASS END=45879449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:30,0 chr2 45879450 . A . PASS END=45879450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 45879451 . C . PASS END=45879571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1111:0,80,255:40,0 chr2 45879572 . C . PASS END=45879572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:25,0 chr2 45879573 . C . PASS END=45879579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:22,0 chr2 45879580 . A . PASS END=45879587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:23:0,51,810:0,51,255:19,0 chr2 45925089 . A . PASS END=45925148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,143,255:40,0 chr2 45928625 . A . PASS END=45928630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:102:0,120,1800:0,255,255:40,0 chr2 46056049 . T A, 220.65 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,33,0:0,25,0:171:258,174,0,2189,174,2189:255,174,0:0,0:2.2065e+02,1.7065e+02,0.0000e+00,4.5000e+02,2.0542e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,38:0,0,29,29 chr2 46070139 . A . PASS END=46070152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,128,255:40,0 chr2 46070153 . A . PASS END=46070153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1578:0,72,255:40,0 chr2 46070154 . G . PASS END=46070202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,111,1754:0,111,255:40,0 chr2 46203568 . C . PASS END=46203589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,644:0,41,255:19,0 chr2 46203590 . T . PASS END=46203590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 46203591 . G . PASS END=46203597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 46203598 . G . PASS END=46203600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 46203601 . A . PASS END=46203601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 46203602 . A . PASS END=46203608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 46203609 . C . PASS END=46203609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 46203610 . G . PASS END=46203611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 46203612 . C . PASS END=46203612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 46203613 . C . PASS END=46203636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:26,0 chr2 46203637 . G . PASS END=46203639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 46203640 . G . PASS END=46203644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 46203645 . G . PASS END=46203648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 46203649 . A . PASS END=46203649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 46203650 . T . PASS END=46203651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 46203652 . A . PASS END=46203652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 46203653 . G . PASS END=46203657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:28,0 chr2 46203658 . A . PASS END=46203658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr2 46203659 . C . PASS END=46203665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 46203666 . A . PASS END=46203667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr2 46203668 . G . PASS END=46203680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 46203681 . T . PASS END=46203681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr2 46203682 . A . PASS END=46203683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 46203684 . C . PASS END=46203684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 46203685 . T . PASS END=46203704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 46203705 . T . PASS END=46203727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,68,255:25,0 chr2 46206115 . G . PASS END=46206149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:73:0,120,1800:0,208,255:40,0 chr2 46207435 . T . PASS END=46207437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 46207438 . G . PASS END=46207448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 46207449 . G . PASS END=46207449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr2 46207450 . T . PASS END=46207499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1072:0,86,255:34,0 chr2 46207500 . A . PASS END=46207500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 46207501 . A . PASS END=46207505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr2 46207506 . G . PASS END=46207506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 46207507 . A . PASS END=46207511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 46207512 . C . PASS END=46207520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 46211690 . G . PASS END=46211695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:34,0 chr2 46211696 . T . PASS END=46211809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:34:0,92,1288:0,92,255:40,0 chr2 46211810 . C . PASS END=46211819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,990:0,92,255:26,0 chr2 46228543 . T . PASS END=46228641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1068:0,83,255:38,0 chr2 46228642 . T . PASS END=46228644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 46228645 . C . PASS END=46228650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 46228651 . A . PASS END=46228662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr2 46228663 . A . PASS END=46228663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:21,0 chr2 46228664 . C . PASS END=46228670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 46228671 . C . PASS END=46228671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 46228672 . A . PASS END=46228672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 46228673 . G . PASS END=46228684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,52,255:18,0 chr2 46228685 . G . PASS END=46228685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 46230100 . A . PASS END=46230162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,162,255:40,0 chr2 46231681 . C . PASS END=46231774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:36:0,81,1215:0,87,255:40,0 chr2 46231775 . A . PASS END=46231777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,88,255:25,0 chr2 46234601 . A . PASS END=46234605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,647:0,57,255:19,0 chr2 46234606 . A . PASS END=46234611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,666:0,57,255:19,0 chr2 46234612 . C . PASS END=46234612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 46234613 . T . PASS END=46234613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 46234614 . T . PASS END=46234656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,792:0,63,255:26,0 chr2 46234657 . G . PASS END=46234657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 46234658 . A . PASS END=46234658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:27,0 chr2 46234659 . G . PASS END=46234662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 46234663 . C . PASS END=46234663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 46234664 . A . PASS END=46234672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 46234673 . C . PASS END=46234673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 46234674 . A . PASS END=46234674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 46234675 . T . PASS END=46234675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 46234676 . C . PASS END=46234680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 46234681 . C . PASS END=46234688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1037:0,71,255:26,0 chr2 46234689 . C . PASS END=46234699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 46234700 . G . PASS END=46234701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 46234702 . C . PASS END=46234702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 46234703 . C . PASS END=46234734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,892:0,61,255:26,0 chr2 46234735 . G . PASS END=46234735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 46234736 . C . PASS END=46234737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 46234738 . A . PASS END=46234738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 46234739 . A . PASS END=46234771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 46234772 . A . PASS END=46234780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 46234781 . G . PASS END=46234781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr2 46234782 . C . PASS END=46234798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 46234799 . A . PASS END=46234800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 46237483 . G . PASS END=46237489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,947:0,64,255:26,0 chr2 46237490 . T . PASS END=46237490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:27,0 chr2 46237491 . G . PASS END=46237509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,901:0,62,255:26,0 chr2 46237510 . G . PASS END=46237510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 46237511 . A . PASS END=46237511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 46237512 . T . PASS END=46237531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,978:0,81,255:32,0 chr2 46237532 . T . PASS END=46237532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:31,0 chr2 46237533 . C . PASS END=46237539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:33,0 chr2 46237540 . A . PASS END=46237540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:32,0 chr2 46237541 . A . PASS END=46237590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:32,0 chr2 46237591 . A . PASS END=46237591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 46237592 . G . PASS END=46237593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 46237594 . A . PASS END=46237594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,2 chr2 46237595 . T . PASS END=46237595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:38:36:0,38,1129:0,38,255:32,2 chr2 46237596 . T . PASS END=46237596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1186:0,50,255:32,0 chr2 46237597 . T . PASS END=46237620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:34,0 chr2 46237621 . T . PASS END=46237621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 46237622 . A . PASS END=46237656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1094:0,90,255:31,0 chr2 46237823 . G . PASS END=46237876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:59:0,120,1800:0,149,255:40,0 chr2 46251466 . A . PASS END=46251474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:68:0,120,1800:0,140,255:40,0 chr2 46313347 . G . PASS END=46313347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 46313348 . A . PASS END=46313356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:24,0 chr2 46313357 . T . PASS END=46313357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 46313358 . T . PASS END=46313370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:25,0 chr2 46313371 . T . PASS END=46313371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 46313372 . A . PASS END=46313379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 46313380 . G . PASS END=46313380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 46313381 . G . PASS END=46313381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 46313382 . T . PASS END=46313386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 46313387 . A . PASS END=46313387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,836:0,67,255:26,0 chr2 46313388 . C . PASS END=46313389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 46313390 . T . PASS END=46313391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 46313392 . A . PASS END=46313395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 46313396 . T . PASS END=46313396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr2 46313397 . T . PASS END=46313416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1133:0,90,255:35,0 chr2 46313417 . A . PASS END=46313417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr2 46313418 . A . PASS END=46313491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1155:0,80,255:40,0 chr2 46313492 . T . PASS END=46313501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 46372232 . G . PASS END=46372362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,96,255:40,0 chr2 46372363 . C . PASS END=46372370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 46378180 . A . PASS END=46378189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,754:0,66,255:26,0 chr2 46378190 . A . PASS END=46378193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 46378194 . G . PASS END=46378196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 46378197 . G . PASS END=46378266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1186:0,84,255:37,0 chr2 46378267 . T . PASS END=46378267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:31,0 chr2 46378268 . T . PASS END=46378339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1117:0,80,255:40,0 chr2 46378340 . G . PASS END=46378346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 46378347 . G . PASS END=46378347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 46378348 . G . PASS END=46378354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 46378355 . G . PASS END=46378365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,972:0,68,255:26,0 chr2 46378366 . G . PASS END=46378368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 46386745 . T . PASS END=46386750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 46386751 . A . PASS END=46386774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:25,0 chr2 46386775 . G . PASS END=46386775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 46386776 . G . PASS END=46386786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,955:0,75,255:26,0 chr2 46386787 . T . PASS END=46386804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1001:0,81,255:28,0 chr2 46386805 . G . PASS END=46386805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 46386806 . C . PASS END=46386823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 46386824 . T . PASS END=46386834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,76,255:25,0 chr2 46386835 . A . PASS END=46386838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1005:0,87,255:29,0 chr2 46386839 . A . PASS END=46386839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 46386840 . C . PASS END=46386860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 46386861 . G . PASS END=46386874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 46386875 . C . PASS END=46386881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 46386882 . A . PASS END=46386882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:17,0 chr2 46386883 . C . PASS END=46386889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 46386890 . T . PASS END=46386891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 46411874 . A . PASS END=46412020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,134,255:40,0 chr2 46524579 . G . PASS END=46524579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 46524599 . A . PASS END=46524599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 46524650 . G . PASS END=46524650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 46524694 . G . PASS END=46524694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr2 46524704 . T . PASS END=46524704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 46524735 . C . PASS END=46524735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 46524796 . G . PASS END=46524796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 46524814 . C . PASS END=46524814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 46524820 . C . PASS END=46524820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 46524851 . A . PASS END=46524851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 46524913 . G . PASS END=46524913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1217:0,96,255:32,0 chr2 46524940 . G . PASS END=46524940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:34,0 chr2 46524949 . C . PASS END=46524949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 46524959 . G . PASS END=46524959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1388:0,98,255:37,0 chr2 46524965 . C . PASS END=46524965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1504:0,120,255:40,0 chr2 46525051 . A . PASS END=46525076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,107,1392:0,107,255:40,0 chr2 46525084 . G . PASS END=46525084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 46552951 . A . PASS END=46553015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,159,255:40,0 chr2 46574012 . G . PASS END=46574028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,931:0,72,255:26,0 chr2 46574029 . G . PASS END=46574032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 46574033 . G . PASS END=46574033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:28,0 chr2 46574034 . G . PASS END=46574036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 46574037 . A . PASS END=46574037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,934:0,60,255:28,0 chr2 46574038 . A . PASS END=46574202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1133:0,80,255:40,0 chr2 46583279 . C CT, 50.17 PASS DP=18;MQ=246.22;MQRankSum=2.850;ReadPosRankSum=0.424;FractionInformativeReads=0.889;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:4,12,0:0.750,0.000:16:0,9,0:4,3,0:14:66,0,11,166,166,166:255,0,115:4,1:5.0173e+01,1.7329e-01,1.4078e+01,1.8494e+02,2.0094e+02,1.8795e+02:0.00,16.00,19.01,34.77,50.77,37.78:0,4,11,1:4,0,10,2:46583278 chr2 46583290 . T . LowGQ END=46583292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,493:20,0,255:19,0 chr2 46583293 . G . PASS END=46583293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 46583294 . C . LowGQ END=46583297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:22:0,0,606:3,0,255:20,0 chr2 46583298 . G . PASS END=46583298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 46583299 . A . LowGQ END=46583299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,720:0,0,255:21,0 chr2 46583300 . A . PASS END=46583301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,757:0,22,255:21,0 chr2 46583302 . A . LowGQ END=46583303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,590:0,0,255:21,0 chr2 46583304 . G . PASS END=46583304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 46583305 . A . LowGQ END=46583305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,666:0,0,255:21,0 chr2 46583306 . G . PASS END=46583306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 46583307 . T . LowGQ END=46583307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,814:27,0,255:24,0 chr2 46583308 . C . PASS END=46583308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:25,0 chr2 46583309 . C . PASS END=46583309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:1:29:0,1,914:0,1,255:26,0 chr2 46583310 . G . PASS END=46583312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:49:29:0,49,1039:0,49,255:29,0 chr2 46583313 . G . PASS END=46583316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr2 46583317 . A . PASS END=46583318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 46583319 . G . PASS END=46583324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:30,0 chr2 46583325 . C . PASS END=46583326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1049:0,60,255:30,0 chr2 46583327 . G . PASS END=46583327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 46583328 . C . PASS END=46583328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:31,0 chr2 46583329 . A . PASS END=46583359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1178:0,83,255:37,0 chr2 46583360 . G . PASS END=46583360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:36,0 chr2 46583361 . G . PASS END=46583361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 46583362 . G . PASS END=46583362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:37,0 chr2 46583363 . T . PASS END=46583370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1386:0,98,255:36,0 chr2 46583371 . C . PASS END=46583371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:32,0 chr2 46583372 . C . PASS END=46583412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:36,0 chr2 46583413 . A . PASS END=46583413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:30,0 chr2 46583414 . C . PASS END=46583441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1172:0,80,255:32,0 chr2 46583863 . G . PASS END=46583947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:37:0,104,1457:0,104,255:40,0 chr2 46587777 . G . PASS END=46587895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:32:0,82,1150:0,82,255:40,0 chr2 46588024 . G . PASS END=46588024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 46588025 . T . PASS END=46588025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:33,0 chr2 46588026 . C . PASS END=46588227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1260:0,87,255:40,0 chr2 46588228 . A . PASS END=46588228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 46588229 . G . PASS END=46588229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 46596966 . A . PASS END=46596967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 46596968 . T . PASS END=46596972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 46596973 . G . PASS END=46596973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr2 46596974 . A . PASS END=46597032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1141:0,80,255:39,0 chr2 46597033 . G . PASS END=46597033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:32,0 chr2 46597034 . C . PASS END=46597071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1177:0,80,255:34,0 chr2 46597072 . T . PASS END=46597072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:28,0 chr2 46602829 . T . PASS END=46602829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 46602830 . G . PASS END=46602838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr2 46602839 . G . PASS END=46602856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,723:0,60,255:24,0 chr2 46602857 . C . PASS END=46602857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 46602858 . C . PASS END=46602859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 46602860 . G . PASS END=46602867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 46602868 . T . PASS END=46602868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 46602869 . G . PASS END=46602881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1049:0,87,255:31,0 chr2 46602882 . G . PASS END=46602882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 46602883 . G . PASS END=46602917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:32,0 chr2 46602918 . A . PASS END=46602918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 46602919 . T . PASS END=46602921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 46602922 . A . PASS END=46602976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 46603665 . T . PASS END=46603665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 46603678 . T . PASS END=46603690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:31,0 chr2 46603691 . A . PASS END=46603691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 46603692 . A . PASS END=46603696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr2 46603697 . G . PASS END=46603697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:31,0 chr2 46603698 . T . PASS END=46603708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:32:0,96,1180:0,96,255:40,0 chr2 46603709 . A . PASS END=46603868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:35:0,84,1260:0,92,255:40,0 chr2 46603869 . A . PASS END=46603873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:25,0 chr2 46603874 . A . PASS END=46603874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:21,0 chr2 46603875 . T . PASS END=46603881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,73,255:22,0 chr2 46603882 . T . PASS END=46603882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:19,0 chr2 46603883 . C . PASS END=46603892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 46605033 . G . PASS END=46605051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 46605052 . G . PASS END=46605058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 46605059 . G . PASS END=46605063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 46605064 . T . PASS END=46605064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 46605065 . G . PASS END=46605070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 46605071 . G . PASS END=46605071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 46605072 . C . PASS END=46605081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,690:0,51,255:19,0 chr2 46605082 . C . PASS END=46605113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,705:0,60,255:20,0 chr2 46605114 . G . PASS END=46605124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 46605125 . C . PASS END=46605125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 46605126 . A . PASS END=46605126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 46605127 . G . PASS END=46605128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 46605129 . G . PASS END=46605129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 46605130 . C . PASS END=46605137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr2 46605138 . G . PASS END=46605138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 46605139 . G . PASS END=46605152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr2 46605153 . T . PASS END=46605153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:20,0 chr2 46605154 . C . PASS END=46605156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 46605157 . C . PASS END=46605167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:21:0,41,800:0,41,255:19,0 chr2 46605168 . C . PASS END=46605168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 46605169 . A . PASS END=46605177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 46605178 . G . PASS END=46605189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr2 46605190 . C . PASS END=46605216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr2 46605217 . C . PASS END=46605225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,32,255:12,0 chr2 46605226 . G . PASS END=46605226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr2 46605796 . C . PASS END=46605906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:43:0,102,1530:0,103,255:40,0 chr2 46607366 . A . PASS END=46607372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 46607373 . T . PASS END=46607373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr2 46607374 . C . PASS END=46607393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:18,0 chr2 46607394 . C . PASS END=46607407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:23,0 chr2 46607408 . A . PASS END=46607408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 46607409 . T . PASS END=46607437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,908:0,69,255:24,0 chr2 46607438 . A . PASS END=46607438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 46607439 . G . PASS END=46607443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 46607444 . A . PASS END=46607445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:19,0 chr2 46607446 . C . PASS END=46607453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 46607454 . A . PASS END=46607515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,568:0,48,255:19,0 chr2 46607516 . A . PASS END=46607516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr2 46607517 . A . PASS END=46607522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,501:0,51,255:19,0 chr2 46607523 . T . PASS END=46607523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 46607524 . C . PASS END=46607527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 46607528 . C . PASS END=46607530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 46607531 . C . PASS END=46607537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr2 46607538 . C . PASS END=46607542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:23,0 chr2 46607543 . G . PASS END=46607629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1135:0,82,255:36,0 chr2 46607630 . A . PASS END=46607630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr2 46607631 . T . PASS END=46607676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1217:0,86,255:36,0 chr2 46607677 . C . PASS END=46607717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,821:0,60,255:25,0 chr2 46607718 . A . PASS END=46607740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,712:0,44,255:19,0 chr2 46607741 . C . PASS END=46607742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 46607743 . A . PASS END=46607760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,660:0,44,255:19,0 chr2 46607761 . A . PASS END=46607804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr2 46607805 . C . PASS END=46607808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:19,0 chr2 46607809 . G . PASS END=46607809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr2 46607810 . T . PASS END=46607816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 46607817 . C . PASS END=46607830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,627:0,40,255:19,0 chr2 46607831 . C . PASS END=46607834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 46607835 . A . PASS END=46607835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 46607836 . T . PASS END=46607841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 46607842 . C . PASS END=46607856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:17,0 chr2 46608735 . G . PASS END=46608735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 46608736 . T . PASS END=46608736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 46608737 . C . PASS END=46608742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 46608743 . A . PASS END=46608743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:39:29:0,39,812:0,39,255:27,0 chr2 46608744 . G . PASS END=46608745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 46608746 . G . PASS END=46608746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 46608747 . T . PASS END=46608852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1080:0,87,255:38,0 chr2 46608853 . C . PASS END=46608854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 46608855 . G . PASS END=46608856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 46608857 . G . PASS END=46608861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 46609114 . G . PASS END=46609120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,903:0,75,255:26,0 chr2 46609121 . C . PASS END=46609124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,944:0,84,255:28,0 chr2 46609125 . T . PASS END=46609125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,886:0,37,255:26,0 chr2 46609126 . G . PASS END=46609132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr2 46609133 . G . PASS END=46609133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 46609134 . C . PASS END=46609137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1141:0,93,255:33,0 chr2 46609138 . T . LowGQ END=46609138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:0:33:0,0,1033:9,0,255:30,0 chr2 46609139 . C . PASS END=46609147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1018:0,82,255:32,0 chr2 46609148 . T . PASS END=46609148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:31,0 chr2 46609149 . G . PASS END=46609163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1149:0,82,255:33,0 chr2 46609164 . G . PASS END=46609164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:29,0 chr2 46609165 . A . PASS END=46609168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,102,255:32,0 chr2 46609169 . T . PASS END=46609170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:74:35:0,74,1213:0,74,255:32,0 chr2 46609171 . A . PASS END=46609217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,86,255:35,0 chr2 46609218 . T . PASS END=46609228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1001:0,73,255:25,0 chr2 46609564 . A . PASS END=46609589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr2 46609590 . G . PASS END=46609674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:18,0 chr2 46609675 . C . PASS END=46609675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 46609676 . C . PASS END=46609689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr2 46609690 . C . PASS END=46609690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr2 46609691 . C . PASS END=46609695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 46609696 . A . PASS END=46609715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr2 46609716 . T . PASS END=46609716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 46609717 . C . PASS END=46609727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 46609728 . A . PASS END=46609737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:22:11:0,22,405:0,22,255:9,0 chr2 46611648 . G . PASS END=46611652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1299:0,108,255:39,0 chr2 46611653 . G . PASS END=46611653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:38,0 chr2 46611654 . C . PASS END=46611799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,87,255:40,0 chr2 46611889 . C . PASS END=46611889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 46611916 . T . PASS END=46611916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 46611949 . T . PASS END=46611949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 46612084 . C . PASS END=46612084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 46612207 . T . PASS END=46612207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 46612285 . C . PASS END=46612285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:51:41:0,51,765:0,123,255:17,0 chr2 46612326 . GTT G,GT, 50.00 PASS DP=35;MQ=250.00;MQRankSum=4.983;ReadPosRankSum=0.517;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,16,4,0:0.457,0.114,0.000:35:6,12,0,0:9,4,4,0:48:60,0,50,122,78,138,145,103,167,189:255,0,255:13,31:5.0000e+01,6.5233e-05,5.2994e+01,1.2224e+02,8.7891e+01,1.4089e+02,1.6928e+02,1.3734e+02,2.0134e+02,2.1661e+02:0.00,10.00,13.00,10.00,20.00,13.00,34.77,44.77,44.77,37.77:5,10,13,7:10,5,9,11 chr2 46612336 . T . PASS END=46612336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 46612393 . A . PASS END=46612393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:51:0,119,1505:0,119,255:40,0 chr2 46612473 . A . PASS END=46612473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 46612513 . A . PASS END=46612513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 46612532 . C . PASS END=46612532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 46612632 . G . PASS END=46612632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 46612697 . C . PASS END=46612697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,120,255:31,0 chr2 46612782 . C . PASS END=46612782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 46612933 . T . PASS END=46612933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 46612981 . G . PASS END=46612981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 46613024 . C . PASS END=46613024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 46613077 . C . PASS END=46613077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 46613089 . C . PASS END=46613089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 46613104 . G . PASS END=46613104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 46613172 . C . PASS END=46613172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 46613410 . A . PASS END=46613410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1296:0,81,255:34,0 chr2 46613419 . G . PASS END=46613419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1421:0,104,255:38,0 chr2 46613528 . T . PASS END=46613528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 46613589 . G . PASS END=46613589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 46613626 . C . PASS END=46613626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 46613697 . C . PASS END=46613697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:41:0,96,1440:0,123,255:32,0 chr2 46613715 . C . PASS END=46613716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1296:0,102,255:34,0 chr2 46706725 . A . PASS END=46706740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,513:0,45,255:19,0 chr2 46706741 . G . PASS END=46706758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr2 46706759 . G . PASS END=46706759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 46706760 . G . PASS END=46706761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 46706762 . G . PASS END=46706762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 46706763 . T . PASS END=46706770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 46706771 . A . PASS END=46706771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr2 46706772 . A . PASS END=46706782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 46706783 . C . PASS END=46706783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr2 46706784 . C . PASS END=46706793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 46706794 . A . PASS END=46706794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 46706795 . T . PASS END=46706797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 46706798 . T . PASS END=46706798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 46706799 . G . PASS END=46706805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 46706806 . G . PASS END=46706841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,47,255:19,0 chr2 46707544 . G . PASS END=46707568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 46707569 . C . PASS END=46707577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr2 46707578 . A . PASS END=46707578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 46707579 . C . PASS END=46707583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr2 46707584 . T . PASS END=46707584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 46707585 . G . PASS END=46707589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 46707590 . A . PASS END=46707590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr2 46707591 . G . PASS END=46707595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 46707596 . A . PASS END=46707600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1024:0,71,255:26,0 chr2 46707601 . T . PASS END=46707602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 46707603 . T . PASS END=46707606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 46707607 . G . PASS END=46707611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 46707612 . A . PASS END=46707614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 46707615 . C . PASS END=46707621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 46707622 . G . PASS END=46707637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:25:0,75,947:0,75,255:26,0 chr2 46707638 . T . PASS END=46707638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 46707639 . G . PASS END=46707639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 46707640 . T . PASS END=46707640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr2 46707641 . C . PASS END=46707646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 46707647 . A . PASS END=46707647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 46707648 . G . PASS END=46707656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 46707657 . T . PASS END=46707683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 46707684 . A . PASS END=46707684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:15,0 chr2 46707685 . C . PASS END=46707693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr2 46707694 . G . PASS END=46707694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr2 46707695 . C . PASS END=46707815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,507:0,41,255:18,0 chr2 46707816 . G . PASS END=46707816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 46707817 . C . PASS END=46707886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,568:0,41,255:18,0 chr2 46707887 . A . PASS END=46707887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr2 46707888 . G . PASS END=46707891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 46707892 . G . PASS END=46707892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 46707893 . C . PASS END=46707897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 46707898 . C . PASS END=46707901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr2 46707902 . T . PASS END=46707903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 46711383 . T . PASS END=46711564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:42:0,96,1496:0,96,255:40,0 chr2 46739170 . T . PASS END=46739174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1089:0,93,255:32,0 chr2 46739175 . T . PASS END=46739175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:31,0 chr2 46739176 . A . PASS END=46739176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:32,0 chr2 46739177 . A . PASS END=46739177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 46739178 . A . PASS END=46739195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1067:0,85,255:37,0 chr2 46739196 . T . PASS END=46739196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1217:0,56,255:35,0 chr2 46739197 . A . PASS END=46739197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1192:0,61,255:34,0 chr2 46739198 . G . PASS END=46739399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:31:0,82,1260:0,82,255:40,0 chr2 46739400 . C . PASS END=46739400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 46739401 . T . PASS END=46739403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 46739404 . T . PASS END=46739452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:26,0 chr2 46739453 . A . PASS END=46739458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 46739459 . A . PASS END=46739461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 46739462 . G . PASS END=46739834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1215:0,90,255:40,0 chr2 46739835 . C . PASS END=46739835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:29,0 chr2 46739836 . A . PASS END=46739842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,94,255:30,0 chr2 46739843 . A . PASS END=46739850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:28:0,75,1125:0,77,255:26,0 chr2 46770186 . A . PASS END=46770186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 46770187 . T . PASS END=46770194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 46770195 . G . PASS END=46770195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 46770196 . G . PASS END=46770196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 46770197 . G . PASS END=46770198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 46770199 . C . PASS END=46770209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr2 46770210 . A . PASS END=46770226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 46770227 . G . PASS END=46770227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 46770228 . G . PASS END=46770256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr2 46770257 . C . LowGQ END=46770257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,402:0,0,255:12,0 chr2 46770258 . C . PASS END=46770293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 46770294 . G . PASS END=46770304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr2 46770305 . C . PASS END=46770326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,202:6,0 chr2 46770327 . G . PASS END=46770327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr2 46770893 . T . PASS END=46770951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,108,1343:0,108,255:40,0 chr2 46787663 . G . PASS END=46787694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,513:0,42,255:18,0 chr2 46787695 . G . PASS END=46787695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 46787696 . G . PASS END=46787698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 46787699 . A . PASS END=46787699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,558:0,37,255:17,0 chr2 46787700 . T . PASS END=46787701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 46787702 . T . PASS END=46787702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 46787703 . C . PASS END=46787705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 46787706 . T . PASS END=46787706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 46787707 . T . PASS END=46787714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr2 46787715 . G . PASS END=46787717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 46787718 . C . PASS END=46787718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 46787719 . C . PASS END=46787722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 46787723 . G . PASS END=46787724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 46787725 . T . PASS END=46787733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,679:0,63,255:22,0 chr2 46787734 . C . PASS END=46787735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 46787736 . C . PASS END=46787745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr2 46787746 . C . PASS END=46787748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 46787749 . T . PASS END=46787750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 46787751 . C . PASS END=46787751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr2 46787752 . G . PASS END=46787754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 46787755 . A . PASS END=46787755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 46787756 . G . PASS END=46787774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr2 46787775 . A . PASS END=46787804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 46787805 . C . PASS END=46787823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,427:0,32,255:13,0 chr2 46787824 . C . PASS END=46787828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 46799867 . G . PASS END=46799923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,120,1800:0,129,255:40,0 chr2 46803226 . G . PASS END=46803382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,992:0,81,255:40,0 chr2 46803383 . G . PASS END=46803390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,105,255:26,0 chr2 46803700 . A . PASS END=46803795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:38:0,90,1206:0,90,255:40,0 chr2 46803888 . G . PASS END=46803944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:98:38:0,98,1365:0,98,255:40,0 chr2 46807748 . A . PASS END=46807863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:47:0,117,1755:0,125,255:40,0 chr2 46808067 . A . PASS END=46808130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:93:0,120,1800:0,255,255:40,0 chr2 46808131 . A . PASS END=46808167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:87:0,120,1800:0,248,255:40,0 chr2 46808168 . C T, 48.68 PASS DP=87;MQ=97.39;MQRankSum=0.201;ReadPosRankSum=5.079;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,38,0:0.437,0.000:87:25,20,0:24,18,0:47:83,0,50,1341,1671,3012:255,0,255:39,0:4.8677e+01,8.0765e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,28,15,23:23,26,17,21 chr2 46808169 . A . PASS END=46808205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:69:0,120,1800:0,152,255:40,2 chr2 46808206 . G . PASS END=46808222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,152,255:40,0 chr2 46808617 . T . PASS END=46808617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 46808618 . T . PASS END=46808618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr2 46808619 . A . PASS END=46808720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1053:0,80,255:40,0 chr2 46808721 . T . PASS END=46808730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,70,255:25,0 chr2 46815214 . C . PASS END=46815318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:159,0:159:99:101:0,120,1800:0,255,255:40,0 chr2 46819047 . T . PASS END=46819064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:67:0,120,1800:0,191,255:40,0 chr2 46819614 . C . PASS END=46819722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:39:0,92,1368:0,92,255:40,0 chr2 46839367 . C . PASS END=46839442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:35:0,104,1349:0,104,255:40,0 chr2 46839443 . T . PASS END=46839483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,108,1673:0,108,255:40,0 chr2 46840833 . T . PASS END=46840924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:65:0,120,1800:0,195,255:40,0 chr2 46842076 . C . PASS END=46842301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:93:38:0,93,1395:0,97,255:40,0 chr2 46842302 . A . PASS END=46842303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 46843999 . C . PASS END=46843999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 46844422 . A . PASS END=46844422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:28,0 chr2 46844423 . T . PASS END=46844431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1058:0,90,255:30,0 chr2 46844432 . A . PASS END=46844432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 46844433 . A . PASS END=46844437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 46845912 . G . PASS END=46845977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,117,1755:0,138,255:40,0 chr2 46846766 . A . PASS END=46846820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,1:118:99:98:0,120,1800:0,255,255:40,2 chr2 46850903 . A . PASS END=46851006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:84:36:0,84,1227:0,91,255:40,0 chr2 46851302 . G . PASS END=46851366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,120,1800:0,125,255:40,0 chr2 46985670 . A . PASS END=46986114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:40:0,85,1345:0,85,255:40,0 chr2 46986115 . T . PASS END=46986115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:39,0 chr2 46986116 . T . PASS END=46986467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:37:0,83,1315:0,83,255:40,0 chr2 46986468 . A . PASS END=46986468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1366:0,77,255:40,0 chr2 46986469 . G . PASS END=46987101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:93:39:0,93,1406:0,93,255:40,0 chr2 46987102 . G . PASS END=46987138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,121,255:40,0 chr2 46987139 . G A, 48.65 PASS DP=50;MQ=226.57;MQRankSum=-4.134;ReadPosRankSum=3.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,22,0:0.440,0.000:50:17,9,0:11,13,0:47:83,0,50,750,983,1733:255,0,255:26,0:4.8651e+01,8.1024e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,8,14:13,15,11,11 chr2 46987140 . G . PASS END=46987176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,137,255:40,0 chr2 46987177 . G . PASS END=46987262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:60:0,120,1800:0,134,255:40,0 chr2 46987263 . C . PASS END=46987280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,145,255:40,0 chr2 46997958 . G . PASS END=46998018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:42:0,91,1574:0,91,255:40,0 chr2 47129011 . G . PASS END=47129011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 47129248 . T . PASS END=47129248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 47129309 . T . PASS END=47129309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,127,255:40,0 chr2 47129330 . T . PASS END=47129330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,111,1665:0,116,255:36,0 chr2 47129503 . C . PASS END=47129503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 47129529 . G . PASS END=47129529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 47129588 . C . PASS END=47129588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 47129619 . A . PASS END=47129619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 47129754 . G . PASS END=47129754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 47129759 . A . PASS END=47129759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1299:0,97,255:37,0 chr2 47129813 . C . PASS END=47129813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 47129820 . T . PASS END=47129820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 47129842 . C . PASS END=47129842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 47129955 . T . PASS END=47129955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 47130037 . T . PASS END=47130037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 47130046 . G . PASS END=47130046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 47132385 . A . PASS END=47132385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 47132429 . C . PASS END=47132429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 47132518 . A . PASS END=47132518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr2 47132523 . T C, 48.78 PASS DP=55;MQ=238.42;MQRankSum=0.789;ReadPosRankSum=1.875;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,24,0:0.436,0.000:55:14,12,0:17,12,0:47:84,0,50,858,1041,1899:255,0,255:31,0:4.8782e+01,7.9212e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,11,9,15:13,18,11,13 chr2 47132538 . A . PASS END=47132538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr2 47132540 . A . PASS END=47132540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 47132602 . C . PASS END=47132733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:53:0,120,1800:0,159,255:40,0 chr2 47133059 . T . PASS END=47133092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1317:0,84,255:40,0 chr2 47133093 . C . PASS END=47133114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1223:0,81,255:35,0 chr2 47133115 . A . PASS END=47133115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:27,0 chr2 47133116 . A . PASS END=47133119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:85:30:0,85,1119:0,85,255:29,0 chr2 47133120 . G . PASS END=47133120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 47133121 . C . PASS END=47133121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 47134948 . C . PASS END=47134968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:25,0 chr2 47134969 . T . PASS END=47134969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 47134970 . G . PASS END=47134970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 47134971 . G . PASS END=47134971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 47134972 . C . PASS END=47134976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 47134977 . G . PASS END=47134978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 47134979 . G . PASS END=47134980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 47134981 . G . PASS END=47135078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1152:0,80,255:37,0 chr2 47135079 . A . PASS END=47135079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 47135080 . T . PASS END=47135084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 47135085 . C . PASS END=47135085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 47135086 . C . PASS END=47135090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 47135091 . A . PASS END=47135096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:23,0 chr2 47135097 . T . PASS END=47135108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:21:0,54,810:0,63,255:19,0 chr2 47136157 . C . PASS END=47136157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 47136162 . T . PASS END=47136174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr2 47136175 . C . PASS END=47136175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 47136176 . T . PASS END=47136176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 47136177 . G . PASS END=47136183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 47136184 . T . PASS END=47136184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 47136185 . A . PASS END=47136193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:26,0 chr2 47136194 . C . PASS END=47136194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 47136195 . A . PASS END=47136202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 47136203 . G . PASS END=47136256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,973:0,84,255:31,0 chr2 47136257 . G . PASS END=47136257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 47136258 . G . PASS END=47136258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 47136259 . C . PASS END=47136268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1000:0,68,255:26,0 chr2 47136269 . G . PASS END=47136270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 47136271 . C . PASS END=47136303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,990:0,65,255:26,0 chr2 47136304 . T . PASS END=47136304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 47136305 . G . PASS END=47136310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr2 47142851 . A . PASS END=47142851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 47142889 . G . PASS END=47142889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 47142943 . T . LowGQ END=47142944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,1:5:0:5:0,0,0:0,0,102:0,0 chr2 47142946 . C . LowGQ END=47142946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,0:5:0:5:0,0,0:0,15,119:0,0 chr2 47142949 . C . LowGQ END=47142949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,1:5:0:5:0,0,0:24,0,132:0,0 chr2 47142950 . GCCCCCCCCC G,GCCCCC, 71.49 PASS DP=3;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,2,1,0:0.667,0.333,0.000:3:0,0,0,0:0,2,1,0:21:83,27,36,84,0,56,109,27,84,109:110,0,2:0,5:7.1488e+01,2.1488e+01,3.3003e+01,7.8005e+01,3.3166e-02,5.3033e+01,1.3130e+02,5.6258e+01,1.1278e+02,1.3430e+02:0.00,6.00,9.00,6.00,12.00,9.00,34.77,40.77,40.77,37.77:0,0,1,2:0,0,2,1 chr2 47142966 . C . PASS END=47142966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr2 47144335 . A . PASS END=47144416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,3:79:99:62:0,120,1800:0,129,255:40,0 chr2 47168681 . A . PASS END=47168703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr2 47168704 . C . PASS END=47168721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr2 47168722 . G . PASS END=47168739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 47168740 . C T, 0.08 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:4,1,0:2,0,0:17:18,0,50,36,215,250:18,0,212:6,0:8.4345e-02,1.7161e+01,7.0161e+01,5.2913e+01,2.6651e+02,2.7049e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,1,0:5,1,1,0 chr2 47168741 . C . PASS END=47168750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 47168751 . G . PASS END=47168752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 47168753 . C . PASS END=47168758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 47168759 . G . PASS END=47168760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 47168761 . C . PASS END=47168776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 47168777 . G . PASS END=47168796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr2 47168797 . G . PASS END=47168797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 47168798 . A . PASS END=47168808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 47168809 . C . PASS END=47168823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 47168824 . G . PASS END=47168859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,303:0,27,255:9,0 chr2 47168860 . C . PASS END=47168864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:6,0 chr2 47177502 . A . PASS END=47177663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,995:0,87,255:40,0 chr2 47177664 . C . PASS END=47177665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 47183978 . C . PASS END=47183980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 47183981 . C . PASS END=47183982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47183983 . G . PASS END=47184015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,790:0,63,255:26,0 chr2 47184016 . A . PASS END=47184016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,726:0,58,255:24,0 chr2 47184017 . C . PASS END=47184025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:30,0 chr2 47184026 . G . PASS END=47184026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 47184027 . T . PASS END=47184085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1080:0,80,255:33,0 chr2 47184086 . T . PASS END=47184086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 47184087 . C . PASS END=47184092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 47184093 . A . PASS END=47184118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr2 47184119 . C . PASS END=47184131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr2 47184132 . C . PASS END=47184138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 47184139 . C . PASS END=47184146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:19,0 chr2 47184149 . A . PASS END=47184149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 47185634 . C . PASS END=47185688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1180:0,83,255:35,0 chr2 47185689 . G . PASS END=47185689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:26,0 chr2 47185690 . A . PASS END=47185691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 47201192 . A . PASS END=47201192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 47202112 . G . PASS END=47202112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 47202113 . C . PASS END=47202113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 47202114 . C . PASS END=47202137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:17,0 chr2 47202138 . T . PASS END=47202138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr2 47202139 . C . PASS END=47202143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr2 47202144 . G . PASS END=47202144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 47202145 . C . PASS END=47202145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 47202146 . C . PASS END=47202151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:23,0 chr2 47202152 . C . PASS END=47202152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 47202153 . T . PASS END=47202182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,884:0,66,255:23,0 chr2 47202183 . A . PASS END=47202183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 47202184 . T . PASS END=47202187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 47202188 . C . PASS END=47202188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:20,0 chr2 47202189 . T . PASS END=47202191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 47202192 . T . PASS END=47202192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,618:0,52,255:20,0 chr2 47202193 . T . PASS END=47202193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 47202194 . T . PASS END=47202194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr2 47202195 . G . PASS END=47202200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr2 47202201 . G . PASS END=47202201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 47202202 . C . PASS END=47202203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 47202204 . T . PASS END=47202204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 47202205 . C . PASS END=47202210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 47202211 . T . PASS END=47202242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,582:0,46,255:18,0 chr2 47205931 . A . PASS END=47205937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1184:0,102,255:35,0 chr2 47205938 . A . PASS END=47205938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,978:0,74,255:33,0 chr2 47205939 . T . PASS END=47206046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:38:0,81,1260:0,81,255:40,0 chr2 47206051 . G . PASS END=47206051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 47220589 . G . PASS END=47220667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:37:0,85,1395:0,85,255:40,0 chr2 47220672 . T . PASS END=47220672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:30,0 chr2 47221495 . G . PASS END=47221522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:18,0 chr2 47221523 . C . PASS END=47221577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 47221578 . C . PASS END=47221578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 47221579 . T . PASS END=47221579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 47221580 . G . PASS END=47221629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1022:0,84,255:31,0 chr2 47221630 . A . PASS END=47221630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 47221631 . C . PASS END=47221636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 47221637 . C . PASS END=47221649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr2 47221650 . A . PASS END=47221652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr2 47221653 . A . PASS END=47221653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 47221656 . A . PASS END=47221656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47222275 . C . PASS END=47222338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,112,1456:0,112,255:40,0 chr2 47225989 . A . PASS END=47226018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,121,255:40,0 chr2 47232663 . A . PASS END=47232680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,116,1627:0,116,255:40,0 chr2 47233061 . G . PASS END=47233185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:35:0,82,1260:0,82,255:40,1 chr2 47233186 . C . PASS END=47233198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,74,255:25,0 chr2 47233201 . A . PASS END=47233202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 47233778 . A . PASS END=47233778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 47233780 . T . PASS END=47233863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,102,1530:0,111,255:40,0 chr2 47238469 . G . PASS END=47238476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,568:0,48,255:19,0 chr2 47238477 . A . PASS END=47238495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,892:0,61,255:26,0 chr2 47238496 . G . PASS END=47238505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr2 47238506 . A . PASS END=47238542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr2 47238543 . C . PASS END=47238543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 47238544 . C . PASS END=47238563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 47238564 . C . PASS END=47238574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,714:0,46,255:18,0 chr2 47249001 . C . PASS END=47249009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr2 47249010 . G . PASS END=47249013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 47249014 . A . PASS END=47249014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 47249015 . G . PASS END=47249015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 47249016 . C . PASS END=47249016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 47249017 . A . PASS END=47249026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,617:0,44,255:19,0 chr2 47249027 . G . PASS END=47249027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr2 47249028 . A . PASS END=47249036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,645:0,43,255:18,0 chr2 47249037 . A . PASS END=47249037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr2 47249038 . G . PASS END=47249038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 47249039 . C . PASS END=47249063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:18,0 chr2 47249064 . C . PASS END=47249064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 47249065 . T . PASS END=47249118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:19,0 chr2 47249223 . T . PASS END=47249223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 47250547 . C . PASS END=47250604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,101,1377:0,101,255:39,0 chr2 47251426 . G . PASS END=47251451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr2 47251452 . C . PASS END=47251454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 47251455 . A . PASS END=47251455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47251456 . G . PASS END=47251461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 47251462 . C . PASS END=47251462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 47251463 . C . PASS END=47251471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr2 47251472 . T . PASS END=47251472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 47251473 . C . PASS END=47251482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 47251483 . G . PASS END=47251483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 47251484 . G . PASS END=47251484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 47251485 . C . PASS END=47251485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 47251486 . C . PASS END=47251498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:21,0 chr2 47251501 . G . PASS END=47251502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr2 47256359 . A . PASS END=47256359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 47256363 . A . PASS END=47256393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:26,0 chr2 47256394 . C . PASS END=47256401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 47256402 . G . PASS END=47256402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr2 47256403 . T . PASS END=47256462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1305:0,90,255:39,0 chr2 47256463 . A . PASS END=47256463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:32,0 chr2 47256464 . C . PASS END=47256472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:33,0 chr2 47256473 . T . PASS END=47256473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:29,0 chr2 47256474 . G . PASS END=47256480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:30,0 chr2 47256481 . A . PASS END=47256492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,74,255:25,0 chr2 47256493 . T . PASS END=47256493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:20,0 chr2 47256494 . G . PASS END=47256495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 47256496 . C . PASS END=47256515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:18,0 chr2 47256516 . A . PASS END=47256523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 47256526 . G . PASS END=47256526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 47272856 . G . PASS END=47272874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1159:0,89,255:36,0 chr2 47272875 . C . PASS END=47272875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr2 47272876 . A . PASS END=47272916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,102,255:38,0 chr2 47272917 . T . PASS END=47272917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:29,0 chr2 47272918 . G . PASS END=47272941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:32,0 chr2 47272942 . T . PASS END=47272942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 47272943 . C . PASS END=47272952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 47273454 . C . PASS END=47273462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 47273463 . C . PASS END=47273481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,672:0,60,255:21,0 chr2 47273482 . C . PASS END=47273483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 47273484 . G . PASS END=47273499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr2 47273500 . G . PASS END=47273502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 47273503 . G . PASS END=47273503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 47273504 . A . PASS END=47273531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr2 47273532 . G . PASS END=47273534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 47273535 . G . PASS END=47273541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 47273542 . C . PASS END=47273570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,70,255:26,0 chr2 47273574 . A . PASS END=47273575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 47274405 . A . PASS END=47274476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,122,255:40,0 chr2 47277088 . A . PASS END=47277164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,114,1658:0,114,255:40,0 chr2 47277165 . A . PASS END=47277185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,104,1800:0,104,255:40,0 chr2 47277479 . G . PASS END=47277484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:31,0 chr2 47277485 . G . PASS END=47277499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 47277500 . C . PASS END=47277506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,77,255:26,0 chr2 47277507 . A . PASS END=47277507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr2 47278882 . C . PASS END=47278882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 47278885 . G . PASS END=47278887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 47278888 . C . PASS END=47278890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr2 47278891 . G . PASS END=47278891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 47278892 . G . PASS END=47278892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 47278893 . C . PASS END=47278904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 47278905 . A . PASS END=47278918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1047:0,74,255:26,0 chr2 47278919 . G . PASS END=47278933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 47278934 . G . PASS END=47278944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 47278945 . C . PASS END=47278947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 47278948 . T . PASS END=47278963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,978:0,67,255:26,0 chr2 47278964 . G . PASS END=47278964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,2 chr2 47278965 . A . PASS END=47278965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,1016:0,21,255:26,2 chr2 47278966 . A . PASS END=47278966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr2 47278967 . G . PASS END=47278978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 47278979 . G . PASS END=47279006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr2 47279007 . T . PASS END=47279019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr2 47281228 . A . PASS END=47281268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,134,255:40,0 chr2 47287908 . C . PASS END=47287908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr2 47287909 . T . PASS END=47287913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 47287914 . T . PASS END=47287923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr2 47287924 . G . PASS END=47287924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:24,0 chr2 47287925 . C . PASS END=47287927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:26,0 chr2 47287928 . C . PASS END=47287932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 47287933 . C . PASS END=47287934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 47287935 . T . PASS END=47287936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:30,0 chr2 47287937 . A . PASS END=47287937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 47287938 . A . PASS END=47287945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr2 47287946 . G . PASS END=47287947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 47287948 . T . PASS END=47287964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1080:0,90,255:30,0 chr2 47287965 . C . PASS END=47287965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:28,0 chr2 47287966 . G . PASS END=47287969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 47287970 . G . PASS END=47287970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 47287971 . G . PASS END=47287972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 47287973 . C . PASS END=47287973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 47287974 . T . PASS END=47288013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1154:0,83,255:34,0 chr2 47288014 . G . PASS END=47288014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 47288015 . C . PASS END=47288047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:31,0 chr2 47288048 . A . PASS END=47288048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 47288049 . A . PASS END=47288063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr2 47288064 . A . PASS END=47288093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,908:0,61,255:26,0 chr2 47288094 . G . PASS END=47288094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 47288095 . C . PASS END=47288096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 47288097 . T . PASS END=47288108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:21:0,51,765:0,53,255:18,0 chr2 47288109 . T . PASS END=47288109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr2 47288110 . G . PASS END=47288110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr2 47300841 . G . PASS END=47300845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 47300846 . G . PASS END=47300847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47300848 . T . PASS END=47300850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 47300851 . T . PASS END=47300851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 47300852 . G . PASS END=47300861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 47300862 . G . PASS END=47300862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 47300863 . G . PASS END=47300866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 47300867 . C . PASS END=47300881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:15,0 chr2 47300882 . G . PASS END=47300882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 47300883 . A . PASS END=47300883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 47300884 . A . PASS END=47300884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 47300885 . G . PASS END=47300888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 47300889 . C . PASS END=47300890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 47300891 . T . PASS END=47300897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 47300898 . G . PASS END=47300906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,565:0,32,255:14,0 chr2 47300907 . A . PASS END=47300907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 47300908 . G . PASS END=47300971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,535:0,45,255:19,0 chr2 47300972 . C . PASS END=47300982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr2 47300983 . T . PASS END=47300984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,705:0,49,255:21,0 chr2 47300985 . G . PASS END=47300991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 47300992 . T . PASS END=47301014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 47301015 . G . PASS END=47301020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 47301021 . A . PASS END=47301021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:14,0 chr2 47301022 . G . PASS END=47301028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:15,0 chr2 47301029 . A G, 47.11 PASS DP=19;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=2.662;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:7,5,0:5,2,0:46:82,0,50,248,429,677:214,0,255:10,0:4.7109e+01,1.0613e-04,5.3000e+01,2.4803e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,3,4:5,7,1,6 chr2 47301030 . C . PASS END=47301030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 47301031 . T . PASS END=47301031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 47301032 . G . PASS END=47301036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr2 47301037 . T . PASS END=47301037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,572:0,35,255:16,0 chr2 47301038 . C . PASS END=47301053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 47301054 . G . PASS END=47301054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 47301055 . A . PASS END=47301055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47301056 . G . PASS END=47301056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 47301057 . C . PASS END=47301062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47314147 . T . PASS END=47314161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr2 47314162 . A . PASS END=47314162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:29,0 chr2 47314163 . T . PASS END=47314163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 47314164 . T . PASS END=47314164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr2 47314165 . G . PASS END=47314198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1131:0,80,255:32,0 chr2 47314199 . A . PASS END=47314201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:32,1 chr2 47314202 . T . PASS END=47314227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:33,0 chr2 47314228 . G . PASS END=47314228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1039:0,41,255:26,0 chr2 47314229 . A . PASS END=47314230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 47314231 . T . PASS END=47314231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr2 47314232 . T . PASS END=47314232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr2 47314233 . G . PASS END=47314233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 47314234 . T . PASS END=47314234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:26,0 chr2 47314235 . C . PASS END=47314235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 47314236 . T . PASS END=47314238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 47314239 . A . PASS END=47314246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:25,0 chr2 47314247 . T . PASS END=47314247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,811:0,36,255:21,0 chr2 47314248 . A . PASS END=47314248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:28:0,63,945:0,67,255:20,0 chr2 47314249 . T . PASS END=47314269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:20:0,47,729:0,47,255:19,0 chr2 47317409 . T . PASS END=47317513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:53:0,105,1575:0,152,255:40,0 chr2 47357065 . C . PASS END=47357134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:75:0,120,1800:0,209,255:40,0 chr2 47357335 . C . PASS END=47357399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:38:0,84,1266:0,84,255:40,0 chr2 47378397 . C . PASS END=47378405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,831:0,61,255:26,0 chr2 47378406 . G . PASS END=47378412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:83:28:0,83,845:0,83,255:30,0 chr2 47378413 . A . PASS END=47378413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 47378414 . G . PASS END=47378654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:32:0,81,1122:0,91,255:40,0 chr2 47380096 . T . PASS END=47380107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:81:0,120,1800:0,219,255:40,0 chr2 47380108 . T . PASS END=47380144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:94:0,120,1800:0,226,255:40,0 chr2 47380145 . T C, 49.90 PASS DP=96;MQ=250.00;MQRankSum=8.389;ReadPosRankSum=5.142;FractionInformativeReads=0.990;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,46,0:0.484,0.000:95:24,25,0:25,21,0:48:85,0,50,1606,1744,3350:255,0,255:40,0:4.9898e+01,6.6269e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,29,26,20:27,22,23,23 chr2 47380146 . G . PASS END=47380155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,255,255:40,0 chr2 47382310 . C . PASS END=47382314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 47382315 . C . PASS END=47382315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 47382316 . T . PASS END=47382316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 47382317 . G . PASS END=47382317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 47382318 . T . PASS END=47382341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr2 47382342 . G . PASS END=47382342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 47382343 . G . PASS END=47382349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 47382350 . C . PASS END=47382350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 47382351 . T . PASS END=47382381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1127:0,87,255:31,0 chr2 47382382 . C . PASS END=47382390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,80,255:26,0 chr2 47387915 . T . PASS END=47387938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:97:0,120,1800:0,229,255:40,0 chr2 47387939 . A . PASS END=47387943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,3:100:99:100:0,120,1800:0,228,255:40,0 chr2 47387949 . A . PASS END=47387949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:98:0,120,1800:0,255,255:40,0 chr2 47388862 . C . PASS END=47388997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:32:0,90,1219:0,96,255:40,0 chr2 47389007 . A . PASS END=47389007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 47389420 . C . PASS END=47389420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 47389425 . C . PASS END=47389531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:57:0,120,1800:0,164,255:40,0 chr2 47389539 . G . PASS END=47389539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:68:0,120,1800:0,171,255:40,0 chr2 47389658 . C . PASS END=47389801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:45:0,117,1645:0,119,255:40,0 chr2 47397873 . C . PASS END=47397903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,184,255:40,0 chr2 47399553 . C . PASS END=47399563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:96:0,120,1800:0,255,255:40,0 chr2 47399564 . G . PASS END=47399598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:86:0,120,1800:0,245,255:40,0 chr2 47403580 . C . PASS END=47403634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,120,255:40,0 chr2 47403635 . T . PASS END=47403635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1330:0,74,255:39,0 chr2 47403636 . C . PASS END=47403680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1260:0,103,255:40,0 chr2 47596215 . A . PASS END=47596215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 47596216 . T . PASS END=47596218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 47596219 . A . PASS END=47596223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 47596224 . A . PASS END=47596224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:4,0 chr2 47596225 . A . PASS END=47596229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,197:5,0 chr2 47596230 . C . PASS END=47596230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:5,0 chr2 47596231 . T . PASS END=47596237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,189:6,0 chr2 47596238 . G . PASS END=47596243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr2 47596244 . A . PASS END=47596255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,241:6,0 chr2 47596256 . G . PASS END=47596256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 47596257 . G . PASS END=47596260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr2 47596261 . C . PASS END=47596264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 47596265 . C . PASS END=47596285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,333:0,27,255:9,0 chr2 47596286 . C . PASS END=47596328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr2 47596329 . C . PASS END=47596374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr2 47596453 . G . PASS END=47596453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 47596566 . C . PASS END=47596566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 47596645 . A . PASS END=47596677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,731:0,63,255:24,0 chr2 47596678 . C . PASS END=47596682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 47596683 . T . PASS END=47596683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 47596684 . G . PASS END=47596697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 47596698 . G . PASS END=47596698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 47596699 . A . PASS END=47596702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 47596703 . T . PASS END=47596703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr2 47596704 . T . PASS END=47596708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr2 47596709 . C . PASS END=47596730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,901:0,74,255:25,0 chr2 47596731 . G . PASS END=47596731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 47596732 . A . PASS END=47596748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,870:0,61,255:24,0 chr2 47596749 . G . PASS END=47596751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 47596752 . C . PASS END=47596756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 47596757 . C . PASS END=47596759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47596760 . G . PASS END=47596762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 47596763 . T . PASS END=47596763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47596764 . G . PASS END=47596766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 47596767 . G . PASS END=47596767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:19,0 chr2 47596768 . G . PASS END=47596769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47596770 . C . PASS END=47596770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 47596771 . A . PASS END=47596806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 47596807 . A . PASS END=47596807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:14,0 chr2 47596808 . T . PASS END=47596810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 47596811 . G . PASS END=47596813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 47596814 . G . PASS END=47596820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 47596821 . A . PASS END=47596821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 47596822 . A . PASS END=47596822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 47596823 . G . PASS END=47596823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:11,0 chr2 47596824 . A . PASS END=47596838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 47596839 . G . PASS END=47596839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:14:0,21,315:0,42,255:7,0 chr2 47596840 . C . PASS END=47596844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:18:14:0,18,270:0,42,255:6,0 chr2 47596845 . A . PASS END=47596847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:14:0,21,315:0,42,255:7,0 chr2 47596848 . C . PASS END=47596852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:18:14:0,18,270:0,42,255:6,0 chr2 47596853 . C CG, 49.86 PASS DP=15;MQ=250.00;MQRankSum=3.183;ReadPosRankSum=0.058;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:3,5,0:5,2,0:48:79,0,50,226,257,483:226,0,255:7,11:4.9856e+01,6.6527e-05,5.3000e+01,2.3143e+02,2.9199e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:4,4,2,5:5,3,2,5 chr2 47596854 . G . LowGQ END=47596854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,7:15:0:15:0,0,31:226,0,255:12,0 chr2 47596855 . G . PASS END=47596856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 47596857 . G . PASS END=47596869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:10:0,24,360:0,30,255:9,0 chr2 47596870 . G . PASS END=47596896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,390:0,33,255:12,0 chr2 47596897 . C . PASS END=47596908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 47596909 . T . PASS END=47596909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 47596910 . C . PASS END=47596925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 47596926 . A . PASS END=47596926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 47596927 . C . PASS END=47596942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 47596943 . G . PASS END=47596943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 47596944 . C . PASS END=47596948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 47600602 . A . PASS END=47600710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:36:0,91,1258:0,91,255:40,0 chr2 47600947 . T . PASS END=47600952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr2 47600953 . C . PASS END=47600955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 47600956 . A . PASS END=47600957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,986:0,68,255:28,0 chr2 47600958 . T . PASS END=47600958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:27,0 chr2 47600959 . G . PASS END=47601068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:29:0,87,936:0,87,255:40,0 chr2 47601069 . G . PASS END=47601105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,153,255:40,0 chr2 47601106 . T C, 46.06 PASS DP=59;MQ=250.00;MQRankSum=6.427;ReadPosRankSum=3.427;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,23,0:0.390,0.000:59:22,12,0:14,11,0:45:81,0,50,815,1250,2065:255,0,255:32,0:4.6061e+01,1.2943e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,22,11,12:22,14,18,5 chr2 47601107 . G . PASS END=47601143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,117,1755:0,122,255:40,0 chr2 47601144 . G . PASS END=47601173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1260:0,98,255:40,0 chr2 47601174 . C . PASS END=47601174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:29,0 chr2 47601175 . G . PASS END=47601181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,98,255:31,0 chr2 47601182 . A . PASS END=47601187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1125:0,93,255:26,0 chr2 47602372 . G . PASS END=47602439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,247,255:40,0 chr2 47604151 . A . PASS END=47604151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,191,255:40,0 chr2 47604153 . T . PASS END=47604216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:71:0,120,1800:0,134,255:40,0 chr2 47606078 . A . PASS END=47606078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1543:0,120,255:40,0 chr2 47606084 . T . PASS END=47606084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1518:0,107,255:39,0 chr2 47606092 . T . PASS END=47606193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,141,255:40,1 chr2 47606199 . T . PASS END=47606199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr2 47606902 . A . PASS END=47606902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 47606907 . G . PASS END=47607108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:58:0,120,1800:0,135,255:40,1 chr2 47612302 . C . PASS END=47612349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,112,1768:0,112,255:40,0 chr2 47612354 . A . PASS END=47612354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 47613709 . A . PASS END=47613709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 47613711 . A . PASS END=47613752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:83:0,120,1800:0,206,255:40,0 chr2 47613755 . A . PASS END=47613755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr2 47613895 . C . PASS END=47613895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr2 47630013 . A . PASS END=47630013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 47630015 . G . PASS END=47630015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 47630017 . G . PASS END=47630018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 47630021 . C . PASS END=47630021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 47630023 . A . PASS END=47630023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 47630032 . G . PASS END=47630032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 47630035 . G . PASS END=47630035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 47630042 . C . PASS END=47630042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 47630050 . G . PASS END=47630050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 47630052 . A . PASS END=47630052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 47630054 . C . PASS END=47630054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47630066 . T . PASS END=47630066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 47630068 . C . PASS END=47630070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 47630072 . T . PASS END=47630072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 47630076 . C . PASS END=47630077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 47630090 . A . PASS END=47630091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 47630101 . G . PASS END=47630101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 47630106 . G . PASS END=47630106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 47630115 . C . PASS END=47630116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 47630118 . A . PASS END=47630118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 47630135 . G . PASS END=47630135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 47630138 . A . PASS END=47630139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:18,0 chr2 47630145 . G . PASS END=47630145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47630149 . C . PASS END=47630150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 47630152 . C . PASS END=47630152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 47630155 . C . PASS END=47630155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 47630158 . A . PASS END=47630158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 47630162 . T . PASS END=47630162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 47630169 . C . PASS END=47630169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 47630173 . G . PASS END=47630173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 47630177 . G . PASS END=47630177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 47630186 . C . PASS END=47630186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 47630188 . A . PASS END=47630188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 47630190 . C . PASS END=47630191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 47630199 . G . PASS END=47630200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 47630215 . G . PASS END=47630215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 47630217 . G . PASS END=47630217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 47630219 . G . PASS END=47630219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:25,0 chr2 47630225 . G . PASS END=47630225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 47630229 . T . PASS END=47630231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 47630233 . C . PASS END=47630233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 47630235 . G . PASS END=47630235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 47630237 . C . PASS END=47630237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 47630245 . G . PASS END=47630246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 47630248 . G . PASS END=47630249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 47630251 . C . PASS END=47630251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47630253 . T . PASS END=47630253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 47630255 . G . PASS END=47630255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:18,0 chr2 47630257 . A . PASS END=47630258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 47630263 . G . PASS END=47630263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 47630266 . G . PASS END=47630266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 47630287 . G . PASS END=47630287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 47630288 . G . PASS END=47630288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 47630295 . G . PASS END=47630295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 47630296 . C . PASS END=47630296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 47630297 . A . PASS END=47630297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 47630302 . C . PASS END=47630302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 47630317 . G . PASS END=47630317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 47630319 . G . PASS END=47630319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 47630320 . G . PASS END=47630324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:17,0 chr2 47630327 . C . PASS END=47630349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,599:0,44,255:17,0 chr2 47630350 . A . PASS END=47630350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr2 47630351 . G . PASS END=47630366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:13,0 chr2 47630367 . A . PASS END=47630367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 47630368 . G . PASS END=47630388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 47630389 . T . PASS END=47630389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 47630390 . G . PASS END=47630390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 47630391 . C . PASS END=47630391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 47630392 . G . PASS END=47630392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 47630393 . C . PASS END=47630396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 47630397 . T . PASS END=47630397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 47630398 . T . PASS END=47630403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 47630404 . G . PASS END=47630404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 47630405 . C . PASS END=47630409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 47630410 . C . PASS END=47630411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 47630412 . G . PASS END=47630412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 47630413 . A . PASS END=47630413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 47630414 . G . PASS END=47630428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,459:0,39,255:13,0 chr2 47630429 . A . PASS END=47630429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 47630430 . G . PASS END=47630434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr2 47630435 . C . PASS END=47630459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr2 47630460 . A . PASS END=47630460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 47630461 . C . PASS END=47630463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 47630464 . C . PASS END=47630464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr2 47630465 . G . PASS END=47630512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,665:0,41,255:19,0 chr2 47630513 . G . PASS END=47630517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr2 47630518 . T . PASS END=47630518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 47630519 . G . PASS END=47630528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47630529 . A . PASS END=47630547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 47630549 . C . PASS END=47630549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 47630553 . G . PASS END=47630553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 47635534 . T . PASS END=47635566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:45:0,113,1498:0,113,255:40,0 chr2 47635567 . T . PASS END=47635695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:84:37:0,84,1260:0,90,255:40,0 chr2 47635696 . T . PASS END=47635696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 47635698 . A . PASS END=47635698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:24,0 chr2 47637228 . C . PASS END=47637231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 47637232 . G . PASS END=47637243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:16,0 chr2 47637244 . C . PASS END=47637244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr2 47637245 . A . PASS END=47637251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,590:0,40,255:19,0 chr2 47637252 . C . PASS END=47637256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:21,0 chr2 47637257 . T . PASS END=47637257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,615:0,46,255:20,0 chr2 47637258 . T . PASS END=47637262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 47637263 . G . PASS END=47637263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 47637264 . A . PASS END=47637269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 47637270 . T . PASS END=47637270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,706:0,14,255:20,0 chr2 47637271 . C . PASS END=47637271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 47637272 . T . PASS END=47637286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:23:0,64,856:0,64,255:26,0 chr2 47637287 . A . PASS END=47637287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,809:0,48,255:24,0 chr2 47637288 . T . PASS END=47637290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 47637291 . C . PASS END=47637294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:29,0 chr2 47637295 . T . PASS END=47637295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 47637296 . T . PASS END=47637325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:30:0,82,1036:0,82,255:40,0 chr2 47637326 . G . PASS END=47637326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1424:0,74,255:37,0 chr2 47637327 . C . PASS END=47637477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:34:0,90,1350:0,90,255:40,0 chr2 47637478 . A . PASS END=47637482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 47637483 . C . PASS END=47637510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr2 47637511 . G . PASS END=47637515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 47637517 . C . PASS END=47637517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 47639540 . T . PASS END=47639540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,130,255:40,0 chr2 47639542 . T . PASS END=47639542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 47639547 . A . PASS END=47639701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:41:0,99,1485:0,112,255:40,0 chr2 47639703 . C . PASS END=47639706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:39:0,90,1350:0,101,255:33,0 chr2 47641398 . T . PASS END=47641398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 47641400 . A . PASS END=47641401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,120,1800:0,143,255:40,0 chr2 47641405 . T . PASS END=47641508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:54:0,120,1800:0,146,255:40,0 chr2 47641509 . G . PASS END=47641522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:63:0,120,1800:0,137,255:40,0 chr2 47641523 . A . PASS END=47641523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,6:64:70:64:0,70,1939:0,70,255:38,0 chr2 47641524 . T . PASS END=47641537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:87:56:0,87,1305:0,100,255:40,0 chr2 47641538 . G . PASS END=47641540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:60:55:0,60,900:0,101,255:25,0 chr2 47641541 . C . PASS END=47641548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:42:45:0,42,630:0,54,255:19,0 chr2 47641549 . C . PASS END=47641554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:33:37:0,33,495:0,94,255:13,0 chr2 47641555 . C . PASS END=47641555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:27:37:0,27,405:0,61,255:8,0 chr2 47641556 . A . PASS END=47641558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:18:35:0,18,270:0,38,255:6,0 chr2 47641559 . TAAA TA,T, 88.98 PASS DP=27;MQ=247.16;MQRankSum=1.187;ReadPosRankSum=0.822;FractionInformativeReads=0.704;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:1,9,9,0:0.474,0.474,0.000:19:0,6,2,0:1,3,7,0:5:91,39,3,44,0,23,75,19,29,48:255,0,247:2,33:8.8985e+01,3.8985e+01,5.1806e+00,4.3811e+01,1.5898e+00,2.5191e+01,1.0751e+02,5.3403e+01,6.2961e+01,8.2931e+01:0.00,2.00,5.00,2.00,4.00,5.00,34.77,36.77,36.77,37.77:1,0,12,6:0,1,10,8 chr2 47641560 . A . LowGQ END=47641562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:11,33:44:0:40:0,0,0:255,0,228:16,33 chr2 47641566 . A . PASS END=47641566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:4:36:0,4,1123:0,4,255:25,3 chr2 47641567 . A . PASS END=47641567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:19:35:0,19,1086:0,19,255:26,2 chr2 47643431 . C . PASS END=47643431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr2 47643433 . A . PASS END=47643433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 47643434 . G . PASS END=47643569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:29:0,80,1072:0,80,255:40,0 chr2 47643572 . T . PASS END=47643573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr2 47643576 . A . PASS END=47643576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 47643580 . G . PASS END=47643580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 47656811 . A . PASS END=47656811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr2 47656863 . C . PASS END=47656864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:51:0,120,1800:0,140,255:40,0 chr2 47656874 . A . PASS END=47656874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 47656878 . C . PASS END=47657011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:92:53:0,92,1800:0,92,255:40,0 chr2 47657012 . A . PASS END=47657012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,11:68:6:68:0,6,1549:0,6,255:40,0 chr2 47657013 . T . PASS END=47657060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:81:35:0,81,1305:0,81,255:40,0 chr2 47657061 . G . PASS END=47657061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:28,0 chr2 47657062 . G . PASS END=47657063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 47657064 . T . PASS END=47657066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1024:0,60,255:28,0 chr2 47657067 . G . PASS END=47657072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 47657073 . A . PASS END=47657073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 47657074 . C . PASS END=47657076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 47657077 . G . PASS END=47657079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 47657080 . G . PASS END=47657081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 47657082 . T . PASS END=47657082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:25,0 chr2 47657084 . A . PASS END=47657085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 47657087 . A . PASS END=47657087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 47657091 . A . PASS END=47657091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 47671507 . T . PASS END=47671507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 47672671 . T . PASS END=47672671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 47672673 . C . PASS END=47672675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,131,255:40,0 chr2 47672681 . T . PASS END=47672681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr2 47672684 . T . PASS END=47672799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:57:0,120,1800:0,170,255:40,0 chr2 47672801 . G . PASS END=47672802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr2 47672806 . A . PASS END=47672806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr2 47672890 . A . PASS END=47672890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 47690160 . C . PASS END=47690161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 47690163 . T . PASS END=47690163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:99:54:0,112,1598:0,112,255:40,0 chr2 47690165 . T . PASS END=47690295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:55:0,120,1800:0,148,255:40,0 chr2 47690297 . A . PASS END=47690299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,201,255:40,0 chr2 47693756 . G . PASS END=47693756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr2 47693784 . C . PASS END=47693785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 47693791 . A . PASS END=47693791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr2 47693795 . A . PASS END=47693950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:44:0,99,1485:0,131,255:40,0 chr2 47693952 . G . PASS END=47693952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr2 47698086 . T . PASS END=47698086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 47698091 . T . PASS END=47698091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 47698094 . C . PASS END=47698094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 47698097 . T . PASS END=47698098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,195,255:40,0 chr2 47698100 . G . PASS END=47698206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:63:0,120,1800:0,156,255:40,0 chr2 47698208 . T . PASS END=47698208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 47698214 . G . PASS END=47698214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 47702152 . A . PASS END=47702152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 47702159 . T . PASS END=47702162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 47702163 . G . PASS END=47702166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 47702167 . A . PASS END=47702406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:91:34:0,91,1258:0,91,255:40,0 chr2 47702407 . C . PASS END=47702410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1395:0,97,255:31,0 chr2 47702411 . T . PASS END=47702411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1186:0,61,255:30,0 chr2 47702412 . A . PASS END=47702413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 47702415 . A . PASS END=47702415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr2 47702419 . C . PASS END=47702419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,91,255:26,0 chr2 47702660 . G . PASS END=47702660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 47703491 . T . PASS END=47703491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 47703493 . A . PASS END=47703493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 47703498 . T . PASS END=47703498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 47703501 . T . PASS END=47703502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 47703503 . T . PASS END=47703503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr2 47703504 . A . PASS END=47703505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 47703506 . G . PASS END=47703512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:31,0 chr2 47703513 . T . PASS END=47703513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 47703514 . A . PASS END=47703706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1117:0,89,255:40,0 chr2 47703707 . T . PASS END=47703711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 47703715 . G . PASS END=47703715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 47703719 . A . PASS END=47703719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:22,0 chr2 47705401 . T . PASS END=47705401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1335:0,105,255:35,0 chr2 47705404 . G . PASS END=47705406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1327:0,105,255:36,0 chr2 47705408 . C . PASS END=47705628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:35:0,81,1215:0,98,255:40,0 chr2 47705629 . C . PASS END=47705636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:30:0,60,1125:0,60,255:26,0 chr2 47705637 . A . PASS END=47705637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 47705638 . T . PASS END=47705656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr2 47705657 . A . PASS END=47705664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,78,255:19,0 chr2 47705666 . C . PASS END=47705666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,78,255:14,0 chr2 47705668 . A . PASS END=47705668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 47707823 . A . PASS END=47707823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 47707828 . C . PASS END=47707828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 47707830 . T . PASS END=47708012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:33:0,93,1333:0,98,255:40,0 chr2 47708014 . T . PASS END=47708015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 47708017 . C . PASS END=47708018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr2 47709916 . A . PASS END=47710088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:47:0,120,1800:0,125,255:40,0 chr2 47710095 . C . PASS END=47710095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,221,255:40,0 chr2 47710103 . G . PASS END=47710103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr2 47710135 . G . PASS END=47710135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 47710140 . A . PASS END=47710140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 47710152 . T . PASS END=47710152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 47737177 . G . PASS END=47737194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,134,255:40,0 chr2 47739442 . A . PASS END=47739569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:36:0,87,1305:0,108,255:40,0 chr2 47739570 . A . PASS END=47739573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:34:0,75,1125:0,102,255:26,0 chr2 47748046 . C . PASS END=47748052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 47748053 . G . PASS END=47748053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 47748054 . A . PASS END=47748080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 47748081 . T . PASS END=47748088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 47748089 . C . PASS END=47748089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 47748090 . C . PASS END=47748115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr2 47748116 . C . PASS END=47748117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 47748118 . G . PASS END=47748123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 47748124 . G . PASS END=47748130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 47748131 . T . PASS END=47748142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,235:9,0 chr2 47748143 . C . PASS END=47748151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 47748152 . T . PASS END=47748202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,280:0,27,255:9,0 chr2 47748203 . T . PASS END=47748209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:12,0 chr2 47748210 . A . PASS END=47748210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 47748211 . G . PASS END=47748212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 47748213 . C . PASS END=47748213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 47748214 . C . PASS END=47748227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr2 47748228 . T . PASS END=47748229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 47748230 . G . PASS END=47748232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 47748233 . A . PASS END=47748233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:9,0 chr2 47748234 . T . PASS END=47748243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 47748244 . C . PASS END=47748244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 47748245 . G . PASS END=47748266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 47748267 . C . PASS END=47748268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 47748269 . C . PASS END=47748271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 47748272 . T . PASS END=47748272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 47748273 . C . PASS END=47748291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 47748292 . A . PASS END=47748292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr2 47748293 . C . PASS END=47748323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr2 47748324 . A . PASS END=47748331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 47748332 . G . PASS END=47748332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 47748333 . T . PASS END=47748333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:14,0 chr2 47748334 . G . PASS END=47748335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 47748336 . T . PASS END=47748337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 47748338 . G . PASS END=47748340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47748341 . T . PASS END=47748341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 47748342 . T . PASS END=47748346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47748347 . C . PASS END=47748353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr2 47748354 . G . PASS END=47748357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 47748358 . C . PASS END=47748358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 47748359 . G . PASS END=47748359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr2 47748360 . C . PASS END=47748380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 47748381 . G . PASS END=47748381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 47748382 . C . PASS END=47748384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 47748385 . G . PASS END=47748385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 47748386 . C . PASS END=47748410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,513:0,42,255:15,0 chr2 47748411 . G . PASS END=47748411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr2 47748412 . C . PASS END=47748414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47748415 . C . PASS END=47748417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 47748418 . G . PASS END=47748425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47748426 . C . PASS END=47748428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 47748429 . G . PASS END=47748434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47748435 . T . PASS END=47748437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 47748438 . G . PASS END=47748446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47748447 . T . PASS END=47748450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 47748451 . G . PASS END=47748457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 47748458 . A . PASS END=47748471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 47748472 . G . PASS END=47748485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 47748486 . G . PASS END=47748486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 47748487 . G . PASS END=47748494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 47748495 . G . PASS END=47748495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 47748496 . G . PASS END=47748501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,537:0,48,255:16,0 chr2 47748502 . G . PASS END=47748502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 47748503 . C . PASS END=47748520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:17,0 chr2 47748521 . T . PASS END=47748521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 47748522 . G . PASS END=47748538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr2 47748539 . T . PASS END=47748539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr2 47748540 . G . PASS END=47748550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,690:0,54,255:18,0 chr2 47748551 . A . PASS END=47748551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 47748552 . C . PASS END=47748555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:16,0 chr2 47748556 . G . PASS END=47748556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 47748557 . T . PASS END=47748563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr2 47748564 . A . PASS END=47748564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 47748565 . G . PASS END=47748583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,653:0,41,255:19,0 chr2 47748584 . A . PASS END=47748584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 47748585 . C . PASS END=47748624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,43,255:19,0 chr2 47748625 . C . PASS END=47748625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 47748626 . A . PASS END=47748628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 47748629 . C . PASS END=47748633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:18:0,30,450:0,54,255:13,0 chr2 47748634 . G . PASS END=47748658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 47748659 . A . PASS END=47748659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 47748660 . G . PASS END=47748693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,499:0,45,255:19,0 chr2 47748694 . G . PASS END=47748719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 47748720 . C . PASS END=47748727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 47748728 . T . PASS END=47748739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr2 47748740 . A . PASS END=47748740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,798:0,31,255:22,0 chr2 47748741 . G . PASS END=47748746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:25,0 chr2 47748747 . A . PASS END=47748747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr2 47748748 . G . PASS END=47748766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,864:0,62,255:26,0 chr2 47748767 . G . PASS END=47748771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr2 47748772 . C . PASS END=47748772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 47748773 . A . PASS END=47748773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 47748774 . G . PASS END=47748777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 47748778 . G . PASS END=47748778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 47748779 . C . PASS END=47748783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 47748784 . G . PASS END=47748784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 47748785 . C . PASS END=47748787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 47748788 . A . PASS END=47748788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 47748789 . G . PASS END=47748790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 47748791 . T . PASS END=47748791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:19,0 chr2 47748792 . G . PASS END=47748793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 47748794 . C . PASS END=47748794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 47748795 . G . PASS END=47748815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:23,0 chr2 47748816 . T . PASS END=47748818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,59,255:19,0 chr2 47748819 . A . PASS END=47748821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 47748822 . C . PASS END=47748822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 47748823 . C . PASS END=47748838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 47748839 . C . PASS END=47748839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 47748840 . G . PASS END=47748857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 47748858 . A . PASS END=47748858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 47748859 . G . PASS END=47748874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 47748875 . G . PASS END=47748875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 47748876 . C . PASS END=47748887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr2 47748888 . G . PASS END=47748888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 47748889 . C . PASS END=47748892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 47748893 . T . PASS END=47748893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr2 47748894 . A . PASS END=47748904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 47748905 . A . PASS END=47748906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 47748907 . G . PASS END=47748914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 47748915 . C . PASS END=47748915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 47748916 . G . PASS END=47748921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 47748922 . C . PASS END=47748922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 47748923 . G . PASS END=47748923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 47748924 . T . PASS END=47748924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,788:0,53,255:21,0 chr2 47748925 . C . PASS END=47748926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 47748927 . C . PASS END=47748927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr2 47748928 . G . PASS END=47748929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 47748930 . G . PASS END=47748930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 47748931 . G . PASS END=47748931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 47748932 . G . PASS END=47748932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 47748933 . T . PASS END=47748935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 47748936 . T . PASS END=47748937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,671:0,52,255:22,0 chr2 47748938 . A . PASS END=47748942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr2 47748943 . G . PASS END=47748943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 47748944 . A . PASS END=47748944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,743:0,39,255:22,0 chr2 47748945 . A . PASS END=47748947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 47762011 . G . PASS END=47762160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:38:0,83,1155:0,83,255:40,0 chr2 47762161 . G . PASS END=47762161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr2 47762162 . G . PASS END=47762183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1211:0,86,255:34,0 chr2 47789228 . C . PASS END=47789250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,134,255:40,0 chr2 47797080 . C . PASS END=47797100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 47797101 . C . PASS END=47797123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 47797124 . A . PASS END=47797128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 47797129 . C . PASS END=47797129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 47797130 . C . PASS END=47797172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,380:0,33,255:12,0 chr2 47797173 . C . PASS END=47797182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr2 47797183 . G . PASS END=47797216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:11,0 chr2 47797217 . A . PASS END=47797233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,327:0,27,255:9,0 chr2 47797234 . G . PASS END=47797238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 47797239 . T . PASS END=47797239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 47797240 . G . PASS END=47797268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,286:0,24,255:9,0 chr2 47797269 . C . PASS END=47797285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 47797286 . C . PASS END=47797286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 47797287 . T . PASS END=47797303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:12,0 chr2 47797304 . A . PASS END=47797304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr2 47797305 . C . PASS END=47797305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 47797306 . T . PASS END=47797306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 47797307 . G . PASS END=47797319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,390:0,36,255:12,0 chr2 47797320 . C . PASS END=47797323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 47797324 . G . PASS END=47797334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:12,0 chr2 47797335 . T . PASS END=47797335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr2 47797336 . G . PASS END=47797355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,402:0,33,255:11,0 chr2 47797356 . A . PASS END=47797357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,258:0,16,255:10,0 chr2 47797358 . C . PASS END=47797361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 47797362 . C . PASS END=47797362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 47797363 . G . PASS END=47797367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 47797368 . C . PASS END=47797370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 47797371 . C . PASS END=47797376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 47797377 . G . PASS END=47797377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 47797378 . G . PASS END=47797389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 47797390 . G . PASS END=47797390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 47797391 . C . PASS END=47797397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 47797398 . A . PASS END=47797399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 47797400 . C . PASS END=47797402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 47797403 . C . PASS END=47797404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 47797405 . G . PASS END=47797406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 47797407 . A . PASS END=47797407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 47797408 . G . PASS END=47797413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 47797414 . G . LowGQ END=47797415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,230:6,0,236:7,0 chr2 47797416 . G . PASS END=47797425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:8,0 chr2 47797426 . G . PASS END=47797436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 47797437 . G . PASS END=47797442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr2 47797443 . G . PASS END=47797470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,178:5,0 chr2 47834531 . A . PASS END=47834567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:13,0 chr2 47834568 . G . PASS END=47834568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 47834569 . A . PASS END=47834572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 47834573 . G . PASS END=47834573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 47834574 . G . PASS END=47834586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 47834587 . T . PASS END=47834595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 47859941 . G . PASS END=47859945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:40:0,89,1413:0,89,255:39,0 chr2 48010317 . G . PASS END=48010317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 48010322 . G . PASS END=48010322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 48010329 . G . PASS END=48010329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 48010332 . G . PASS END=48010332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 48010348 . C . PASS END=48010349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 48010353 . G . PASS END=48010353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 48010356 . C . PASS END=48010357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:15,0 chr2 48010361 . C . PASS END=48010361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 48010364 . G . PASS END=48010367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr2 48010369 . C . PASS END=48010385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 48010386 . G . PASS END=48010387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 48010388 . A . PASS END=48010429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,507:0,42,255:17,0 chr2 48010430 . G . PASS END=48010430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 48010431 . C . PASS END=48010438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr2 48010439 . G . PASS END=48010441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 48010442 . T . PASS END=48010442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 48010443 . C . PASS END=48010447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 48010448 . A . PASS END=48010448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 48010449 . G . PASS END=48010449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:17,0 chr2 48010450 . G . PASS END=48010461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 48010462 . A . PASS END=48010462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 48010463 . G . PASS END=48010477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,665:0,41,255:20,0 chr2 48010478 . G . PASS END=48010478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 48010479 . C . PASS END=48010479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 48010480 . T . PASS END=48010480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 48010481 . G . PASS END=48010481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr2 48010482 . C . PASS END=48010484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr2 48010485 . C . PASS END=48010485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 48010486 . C . PASS END=48010488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 48010489 . G . PASS END=48010489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 48010490 . G . PASS END=48010490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr2 48010491 . C . PASS END=48010493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,717:0,52,255:19,0 chr2 48010494 . C . PASS END=48010494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:19,0 chr2 48010495 . T . PASS END=48010495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 48010496 . C . PASS END=48010497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr2 48010498 . T . PASS END=48010498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,596:0,13,255:16,0 chr2 48010499 . T . PASS END=48010503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 48010504 . A . PASS END=48010504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,549:0,10,255:13,0 chr2 48010505 . G . PASS END=48010506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 48010507 . C . PASS END=48010507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:14,0 chr2 48010508 . G . PASS END=48010510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:16,0 chr2 48010511 . G . PASS END=48010511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:14,0 chr2 48010512 . A . PASS END=48010512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:1:19:0,1,515:0,1,255:14,0 chr2 48010513 . T . PASS END=48010513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:14,0 chr2 48010514 . G . PASS END=48010515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,462:0,34,255:16,0 chr2 48010516 . G . PASS END=48010518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,509:0,48,255:16,0 chr2 48010519 . C . PASS END=48010519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,476:0,17,255:15,0 chr2 48010520 . T . PASS END=48010522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,531:0,48,255:16,0 chr2 48010523 . A . PASS END=48010523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,443:0,1,255:12,0 chr2 48010524 . G . PASS END=48010524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 48010525 . C . PASS END=48010525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:14:16:0,14,368:0,14,255:12,0 chr2 48010526 . G . PASS END=48010526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:11,0 chr2 48010527 . A . PASS END=48010527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,441:0,15,255:9,0 chr2 48010528 . G . PASS END=48010529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr2 48010530 . C . LowGQ END=48010530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,386:24,0,255:8,0 chr2 48010531 . T . PASS END=48010534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,495:0,31,255:11,0 chr2 48010535 . C . LowGQ END=48010537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,5:15:0:13:0,0,181:11,0,192:9,0 chr2 48010538 . G . PASS END=48010539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 48010540 . G . PASS END=48010540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:9,0 chr2 48010541 . C . LowGQ END=48010541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,282:9,0,255:9,0 chr2 48010542 . C . PASS END=48010542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,329:0,22,255:10,0 chr2 48010543 . C . PASS END=48010543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 48010544 . A . LowGQ END=48010546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,5:13:0:12:0,0,96:0,0,141:10,0 chr2 48010547 . C . PASS END=48010549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 48010550 . T . LowGQ END=48010552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,260:0,0,255:10,0 chr2 48010553 . G . PASS END=48010554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr2 48010555 . G . PASS END=48010557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr2 48010558 . C . PASS END=48010558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 48010559 . T . PASS END=48010559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:11,0 chr2 48010560 . C . PASS END=48010561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 48010562 . G . LowGQ END=48010562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:10,0 chr2 48010563 . C . PASS END=48010563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 48010564 . G . LowGQ END=48010565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,324:0,0,255:10,0 chr2 48010566 . C . PASS END=48010568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 48010569 . C . PASS END=48010569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 48010570 . G . LowGQ END=48010570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,239:14,0,253:8,0 chr2 48010571 . C . PASS END=48010573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 48010574 . A . PASS END=48010574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,282:0,16,255:9,0 chr2 48010575 . A . PASS END=48010575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 48010576 . G . LowGQ END=48010580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:11:0,0,194:3,0,247:11,0 chr2 48010581 . A . PASS END=48010583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,299:0,16,255:10,0 chr2 48010584 . A . PASS END=48010584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr2 48010585 . C . PASS END=48010585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 48010586 . C . PASS END=48010586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 48010587 . T . PASS END=48010587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:10,0 chr2 48010588 . C . PASS END=48010588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 48010589 . A . PASS END=48010589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,266:0,3,255:10,0 chr2 48010590 . A . PASS END=48010591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 48010592 . G . PASS END=48010593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 48010594 . A . PASS END=48010596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:20:12:0,20,402:0,20,255:11,0 chr2 48010597 . G . PASS END=48010598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 48010599 . T . LowGQ END=48010599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,327:16,0,255:10,0 chr2 48010600 . G . PASS END=48010600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 48010601 . C . PASS END=48010601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 48010602 . G . LowGQ END=48010602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,371:16,0,255:9,0 chr2 48010603 . G . PASS END=48010603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:9,0 chr2 48010604 . A . PASS END=48010604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,363:0,6,255:8,0 chr2 48010605 . G . PASS END=48010605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 48010606 . A . PASS END=48010606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,310:0,3,255:7,0 chr2 48010607 . T . PASS END=48010609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,360:0,20,255:8,0 chr2 48010610 . G . PASS END=48010610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:8,0 chr2 48010611 . T . LowGQ END=48010613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,266:3,0,255:8,0 chr2 48010614 . C . PASS END=48010616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 48010617 . C . PASS END=48010617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:7,0 chr2 48010618 . T . LowGQ END=48010618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,194:6,0,200:7,0 chr2 48010619 . G . PASS END=48010621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 48010622 . G . PASS END=48010622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:6,0 chr2 48010623 . C . LowGQ END=48010623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,227:4,0,231:7,0 chr2 48010624 . C . PASS END=48010624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 48010625 . C . PASS END=48010626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 48010627 . C . PASS END=48010630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 48010631 . A . LowGQ END=48010631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,155:9,0,164:5,0 chr2 48010632 . G . PASS END=48010633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 48010634 . T . LowGQ END=48010635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,192:7,0,201:7,0 chr2 48010636 . G . PASS END=48010637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,227:7,0 chr2 48010639 . G . PASS END=48010639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 48010643 . G . PASS END=48010643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 48011069 . A . PASS END=48011111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:34:0,85,1135:0,85,255:40,0 chr2 48011112 . T . PASS END=48011145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,117,1755:0,128,255:40,0 chr2 48016575 . T . PASS END=48016579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,212,255:40,0 chr2 48018056 . T . PASS END=48018056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 48018060 . C . PASS END=48018060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 48018065 . G . PASS END=48018071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 48018072 . C . PASS END=48018083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:21,0 chr2 48018084 . A . PASS END=48018084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 48018085 . G . PASS END=48018090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,763:0,69,255:23,0 chr2 48018091 . G . PASS END=48018091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr2 48018092 . T . PASS END=48018092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr2 48018093 . T . PASS END=48018101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:26,0 chr2 48018102 . G . PASS END=48018102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 48018103 . A . PASS END=48018103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1069:0,69,255:31,0 chr2 48018104 . T . PASS END=48018250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:33:0,95,1440:0,95,255:40,0 chr2 48018251 . A . PASS END=48018265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:56:0,120,1800:0,156,255:40,0 chr2 48018269 . G . PASS END=48018269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 48018293 . T . LowGQ END=48018293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,6:68:0:68:0,0,2111:6,0,255:40,10 chr2 48023020 . C . PASS END=48023020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 48023025 . C . PASS END=48023025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 48023028 . T . PASS END=48023030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,131,255:40,0 chr2 48023032 . G . PASS END=48023203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,107,1742:0,107,255:40,0 chr2 48023205 . G . PASS END=48023205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:58:0,120,1800:0,141,255:40,0 chr2 48023209 . C . PASS END=48023209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 48025737 . C . PASS END=48025737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 48025742 . C . PASS END=48025742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr2 48025743 . C . PASS END=48025743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 48025745 . G . PASS END=48025745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,825:0,69,255:23,0 chr2 48025747 . C . PASS END=48025748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 48025750 . G . PASS END=48025758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 48025759 . A . PASS END=48025759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 48025760 . C . PASS END=48025767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 48025768 . A . PASS END=48025770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr2 48025771 . G . PASS END=48025771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 48025772 . A . PASS END=48025776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1020:0,90,255:32,0 chr2 48025777 . A . PASS END=48025777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr2 48025778 . G . PASS END=48025806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1103:0,80,255:33,0 chr2 48025807 . G . PASS END=48025807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,967:0,33,255:29,0 chr2 48025808 . A . PASS END=48025809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1097:0,85,255:34,0 chr2 48025810 . G . PASS END=48025810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1079:0,74,255:34,0 chr2 48025811 . A . PASS END=48025811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1321:0,108,255:36,0 chr2 48025812 . A . PASS END=48025812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:35,0 chr2 48025813 . G . LowGQ END=48025813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,876:5,0,255:29,0 chr2 48025814 . T . PASS END=48025814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,1005:0,44,255:32,0 chr2 48025815 . A . PASS END=48025817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1288:0,94,255:35,0 chr2 48025818 . G . PASS END=48025818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1197:0,67,255:34,0 chr2 48025819 . C . PASS END=48025844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:39:0,84,1273:0,84,255:38,0 chr2 48025845 . T . PASS END=48025845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1240:0,72,255:36,0 chr2 48025846 . A . PASS END=48025855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1212:0,84,255:38,0 chr2 48025856 . T . PASS END=48025856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1167:0,66,255:36,0 chr2 48025857 . A . PASS END=48025959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,101,1356:0,101,255:40,2 chr2 48025960 . A . PASS END=48025960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1620:0,58,255:40,2 chr2 48025961 . G . PASS END=48025961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1690:0,75,255:40,2 chr2 48025962 . T . PASS END=48026173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:40,0 chr2 48026174 . A . PASS END=48026174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1206:0,61,255:28,0 chr2 48026175 . C . PASS END=48026221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1166:0,85,255:35,0 chr2 48026222 . A . PASS END=48026222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:31,0 chr2 48026223 . T . PASS END=48026264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1126:0,81,255:37,0 chr2 48026265 . G . PASS END=48026265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:36:40:0,36,924:0,36,255:33,0 chr2 48026266 . C . PASS END=48026445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:38:0,90,1344:0,90,255:40,0 chr2 48026446 . A . PASS END=48026446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1504:0,74,255:37,0 chr2 48026447 . T . PASS END=48026485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1313:0,92,255:39,0 chr2 48026486 . A . PASS END=48026486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:34,0 chr2 48026487 . C . PASS END=48026657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:37:0,86,1360:0,86,255:40,0 chr2 48026658 . G . PASS END=48026658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1421:0,74,255:37,0 chr2 48026659 . A . PASS END=48026769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:40:0,90,1340:0,90,255:40,0 chr2 48026770 . T . PASS END=48026770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1256:0,70,255:30,0 chr2 48026771 . C . PASS END=48026818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1094:0,87,255:37,0 chr2 48026819 . G . PASS END=48026819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr2 48026820 . A . PASS END=48026821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 48026822 . A . PASS END=48026822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 48026823 . G . PASS END=48026827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 48026828 . T . PASS END=48026828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 48026829 . C . PASS END=48026830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 48026831 . T . PASS END=48026831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 48026832 . A . PASS END=48026834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 48026835 . T . PASS END=48026848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1030:0,68,255:28,0 chr2 48026849 . A . PASS END=48026851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 48026852 . G . PASS END=48026852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr2 48026853 . C . PASS END=48026860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,922:0,87,255:29,0 chr2 48026861 . C . PASS END=48026873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:27,0 chr2 48026874 . T . PASS END=48026875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 48026876 . T . PASS END=48026876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 48026877 . A . PASS END=48026882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:29,0 chr2 48026883 . A . PASS END=48026890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:72:31:0,72,1080:0,83,255:26,0 chr2 48026891 . C . PASS END=48026893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 48026894 . C . PASS END=48026922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,947:0,62,255:26,0 chr2 48026923 . C . PASS END=48026923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 48026924 . T . PASS END=48026934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 48026935 . A . PASS END=48026935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 48026936 . C . PASS END=48026943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 48026944 . A . PASS END=48026954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 48026955 . T . PASS END=48026955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,873:0,56,255:25,0 chr2 48026956 . T . PASS END=48027875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1125:0,80,255:40,0 chr2 48027876 . T . PASS END=48027881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 48027882 . G . PASS END=48028329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:31:0,80,1175:0,80,255:40,0 chr2 48030547 . C . PASS END=48030547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 48030549 . C . PASS END=48030549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1415:0,117,255:39,0 chr2 48030555 . A . PASS END=48030800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:90:39:0,90,1358:0,90,255:40,1 chr2 48030801 . G . PASS END=48030818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,87,255:33,0 chr2 48030819 . A . PASS END=48030820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 48030821 . A . PASS END=48030821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,940:0,48,255:24,0 chr2 48030822 . C . PASS END=48030822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 48030823 . A . PASS END=48030823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:22,0 chr2 48030824 . G . PASS END=48030827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:24,0 chr2 48030829 . C . PASS END=48030830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,990:0,68,255:22,0 chr2 48030834 . T . PASS END=48030834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 48032039 . T . PASS END=48032039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 48032041 . A . PASS END=48032133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:32:0,81,1215:0,95,255:40,0 chr2 48032134 . C . PASS END=48032152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,990:0,65,255:26,0 chr2 48032153 . C . PASS END=48032163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,65,255:18,0 chr2 48032164 . C . PASS END=48032164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 48032165 . A . PASS END=48032169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 48032172 . T . PASS END=48032172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,590:0,40,255:16,0 chr2 48032740 . A . LowGQ END=48032740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,16:64:0:64:0,0,1134:255,0,255:40,22 chr2 48032753 . T . PASS END=48032753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 48032755 . A . PASS END=48032786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:63:0,120,1800:0,162,255:40,0 chr2 48032787 . A . PASS END=48032827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,158,255:40,0 chr2 48032828 . G . PASS END=48032848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,114,1710:0,127,255:40,0 chr2 48032851 . G . PASS END=48032852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,102,1530:0,141,255:34,0 chr2 48032855 . T . PASS END=48032855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,105,1575:0,162,255:35,0 chr2 48033273 . T . PASS END=48033273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:104:0,120,1800:0,255,255:40,0 chr2 48033328 . A . PASS END=48033329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:99:0,120,1800:0,255,255:40,0 chr2 48033333 . A . PASS END=48033334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:98:0,120,1800:0,255,255:40,0 chr2 48033336 . T . PASS END=48033337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:95:0,120,1800:0,252,255:40,0 chr2 48033340 . C . PASS END=48033513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:73:0,120,1800:0,179,255:40,0 chr2 48033514 . T . PASS END=48033550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,169,255:40,0 chr2 48033551 . C G, 49.59 PASS DP=80;MQ=250.00;MQRankSum=7.671;ReadPosRankSum=3.271;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,37,0:0.463,0.000:80:26,13,0:17,24,0:48:84,0,50,1315,1472,2787:255,0,255:38,0:4.9585e+01,6.9634e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,26,19,18:14,29,17,20 chr2 48033552 . T . PASS END=48033588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:69:0,120,1800:0,194,255:40,0 chr2 48033589 . A . PASS END=48033796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,130,255:40,0 chr2 48033799 . C . PASS END=48033800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:63:0,120,1800:0,156,255:40,0 chr2 48033816 . A . PASS END=48033816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,217,255:40,0 chr2 48033831 . T . PASS END=48033831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,198,255:40,0 chr2 48033887 . A . PASS END=48033887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 48033890 . CTTT CTT,CT,C,CTTTT, 0.28 DRAGENIndelHardQUAL DP=70;MQ=248.11;MQRankSum=6.084;ReadPosRankSum=-0.699;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:40,13,8,2,6,0:0.188,0.116,0.029,0.087,0.000:69:24,5,3,1,4,0:16,8,5,1,2,0:12:0,8,58,41,215,91,106,283,493,156,101,163,245,352,151,43,149,239,321,215,187:255,0,255:40,43:2.8153e-01,1.2025e+01,6.5025e+01,4.4959e+01,2.2282e+02,9.7959e+01,1.1049e+02,2.9090e+02,4.5000e+02,1.6349e+02,1.0505e+02,1.7155e+02,2.5377e+02,3.6043e+02,1.5805e+02,7.8286e+01,1.8820e+02,2.7799e+02,3.5983e+02,2.5428e+02,2.2501e+02:0.00,4.00,7.00,4.00,8.00,7.00,4.00,8.00,8.00,7.00,4.00,8.00,8.00,8.00,7.00,34.77,38.77,38.77,38.77,38.77,37.77:23,17,12,17:25,15,12,17 chr2 48033896 . T . PASS END=48033896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 48033903 . T . PASS END=48033908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,220,255:40,0 chr2 48033911 . T . PASS END=48033943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:76:0,120,1800:0,161,255:40,0 chr2 48033944 . C . PASS END=48034002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:82:0,120,1800:0,145,255:40,0 chr2 48034004 . A . PASS END=48034004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:96:0,120,1800:0,255,255:40,0 chr2 48034009 . A . PASS END=48034009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:101:0,120,1800:0,255,255:40,0 chr2 48034018 . T . PASS END=48034018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:97:0,120,1800:0,255,255:40,0 chr2 48034033 . G . PASS END=48034033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:100:0,120,1800:0,255,255:40,0 chr2 48034047 . A . PASS END=48034047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:104:0,120,1800:0,255,255:40,0 chr2 48034084 . T . PASS END=48034084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,2:103:99:103:0,120,1800:0,255,255:40,0 chr2 48034351 . C . PASS END=48034351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 48035257 . T . PASS END=48035265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 48035266 . C . PASS END=48035266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 48035267 . T . PASS END=48035272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr2 48035273 . G . PASS END=48035274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 48035275 . A . PASS END=48035275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1041:0,63,255:29,0 chr2 48035276 . T . PASS END=48035555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:82:31:0,82,1316:0,82,255:40,0 chr2 48035556 . A . PASS END=48035556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1202:0,61,255:29,0 chr2 48035557 . A . PASS END=48035566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 48036297 . C . PASS END=48036405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,120,1800:0,134,255:40,0 chr2 48036739 . C . PASS END=48036846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,176,255:40,0 chr2 48037455 . C . PASS END=48037565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,102,1530:0,126,255:40,0 chr2 48040287 . T . PASS END=48040505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:52:0,101,1620:0,101,255:40,0 chr2 48040506 . A . PASS END=48040514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:69:43:0,69,1035:0,96,255:24,0 chr2 48040515 . A . PASS END=48040515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1382:0,57,255:23,0 chr2 48040516 . C . PASS END=48040516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr2 48040930 . C . PASS END=48040947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,132,255:40,0 chr2 48040948 . T . PASS END=48041006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:69:0,120,1800:0,174,255:40,0 chr2 48045918 . C . PASS END=48045967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:69:0,120,1800:0,197,255:40,0 chr2 48045968 . C . PASS END=48046003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:92:0,120,1800:0,205,255:40,0 chr2 48046093 . A . PASS END=48046093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 48046095 . C . PASS END=48046217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:40:0,108,1542:0,115,255:40,0 chr2 48047501 . C . PASS END=48047595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,186,255:40,0 chr2 48049357 . C . PASS END=48049442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,110,1684:0,110,255:40,0 chr2 48050282 . C . PASS END=48050437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:35:0,84,1260:0,84,255:40,0 chr2 48050438 . T . PASS END=48050464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 48050465 . C . PASS END=48050488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:17:0,42,630:0,51,255:19,0 chr2 48050489 . T . PASS END=48050499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 48059488 . C . PASS END=48059522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,143,255:40,0 chr2 48059523 . G . PASS END=48059625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,196,255:40,0 chr2 48059711 . C . PASS END=48059817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,171,255:40,0 chr2 48059908 . C . PASS END=48060020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,158,255:40,0 chr2 48060103 . C . PASS END=48060209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,135,255:40,0 chr2 48061718 . C . PASS END=48061851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,120,1800:0,123,255:40,0 chr2 48061927 . C . PASS END=48062010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:73:0,120,1800:0,169,255:40,0 chr2 48063011 . C . PASS END=48063133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:35:0,81,1215:0,95,255:40,0 chr2 48063134 . T . PASS END=48063140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 48065998 . C . PASS END=48066142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:37:0,81,1336:0,81,255:40,0 chr2 48066556 . A . PASS END=48066556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 48066558 . C . PASS END=48066639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:42:0,84,1357:0,84,255:40,0 chr2 48066781 . C . PASS END=48066907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1255:0,86,255:40,0 chr2 48066908 . T . PASS END=48066908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr2 48132628 . C . PASS END=48132646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,70:0,6,70:2,0 chr2 48132647 . C T, 2.12 DRAGENSnpHardQUAL DP=2;MQ=250.00;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:1,1,0:0,0,0:4:33,0,33,36,36,72:33,0,33:1,0:2.1158e+00,4.1404e+00,3.9891e+01,3.9896e+01,7.4671e+01,7.8656e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,0,1:1,0,0,1 chr2 48132648 . C . PASS END=48132684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,70:0,6,70:2,0 chr2 48132685 . G . PASS END=48132724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,55:3,0 chr2 48132725 . A . PASS END=48132727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 48132728 . C . PASS END=48132730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,164:3,0 chr2 48132731 . C . PASS END=48132742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:5,0 chr2 48132743 . C . PASS END=48132743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 48132744 . T . PASS END=48132747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,225:6,0 chr2 48132748 . G . PASS END=48132754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 48132755 . C . LowGQ END=48132756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:9:0,0,238:6,0,244:8,0 chr2 48132757 . G . PASS END=48132757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 48132758 . C . PASS END=48132758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 48132759 . T . LowGQ END=48132762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:4,0,253:8,0 chr2 48132763 . G . PASS END=48132763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 48132764 . C . PASS END=48132803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:9,0 chr2 48132804 . G . PASS END=48132808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 48132809 . C . PASS END=48132809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 48132810 . G . PASS END=48132859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,337:0,30,255:11,0 chr2 48573354 . A . PASS END=48573368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1218:0,86,255:35,0 chr2 48573369 . G . PASS END=48573369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 48573370 . G . PASS END=48573479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1212:0,87,255:40,0 chr2 48573480 . A . PASS END=48573484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 48573485 . C . PASS END=48573486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 48573487 . C . PASS END=48573506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,81,255:26,0 chr2 48573507 . G . PASS END=48573520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,877:0,83,255:28,0 chr2 48573521 . C . PASS END=48573524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 48573525 . A . PASS END=48573525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 48573526 . A . PASS END=48573526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,895:0,59,255:27,0 chr2 48573527 . C . PASS END=48573533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 48573534 . T . PASS END=48573534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 48573535 . G . PASS END=48573536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 48573537 . C . PASS END=48573537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 48573538 . T . PASS END=48573544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 48573545 . A . PASS END=48573546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 48573547 . G . PASS END=48573547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1033:0,59,255:24,0 chr2 48573548 . C . PASS END=48573549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:26,0 chr2 48573550 . C . PASS END=48573567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1131:0,80,255:29,0 chr2 48573568 . T . PASS END=48573568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:27,0 chr2 48573569 . C . PASS END=48573569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 48573570 . A . PASS END=48573570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:28,0 chr2 48573571 . G . PASS END=48573578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 48573579 . A . PASS END=48573579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 48573580 . G . PASS END=48573584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 48573585 . G . PASS END=48573588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1055:0,74,255:26,0 chr2 48573589 . T . PASS END=48573593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 48573594 . A . PASS END=48573594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,945:0,43,255:24,0 chr2 48573595 . T . PASS END=48573602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1125:0,80,255:29,0 chr2 48573603 . C . PASS END=48573605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 48573606 . T . PASS END=48573606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 48573607 . T . PASS END=48573607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr2 48573608 . G . PASS END=48573890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:33:0,85,1219:0,85,255:40,0 chr2 48586186 . G . PASS END=48586192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:37,0 chr2 48586193 . G . PASS END=48586193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,1 chr2 48586194 . A . PASS END=48586286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:86:40:0,86,1415:0,86,255:40,1 chr2 48589782 . T . PASS END=48589846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:40:0,111,1665:0,120,255:40,0 chr2 48600431 . A . PASS END=48600499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:77:0,120,1800:0,201,255:40,0 chr2 48602059 . G . PASS END=48602093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:36:0,98,1300:0,98,255:40,0 chr2 48602094 . A . PASS END=48602094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1216:0,72,255:38,0 chr2 48602095 . A . PASS END=48602214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,99,1314:0,99,255:40,0 chr2 48602215 . C . PASS END=48602251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:49:0,120,1800:0,137,255:40,0 chr2 48602252 . C T, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.415;ReadPosRankSum=2.696;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:15,18,0:13,10,0:48:85,0,50,992,952,1944:255,0,255:26,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,11,15,13:16,12,15,13 chr2 48602253 . C . PASS END=48602289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,108,1542:0,108,255:40,0 chr2 48602290 . A . PASS END=48602580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:35:0,91,1258:0,91,255:40,0 chr2 48602581 . A . PASS END=48602581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:35,0 chr2 48602582 . G . PASS END=48602582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1380:0,108,255:36,0 chr2 48668093 . A . PASS END=48668094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 48668095 . G . PASS END=48668095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr2 48668096 . G . PASS END=48668096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr2 48668097 . C . PASS END=48668097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr2 48668098 . C . PASS END=48668098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 48668099 . T . PASS END=48668099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 48668100 . C . PASS END=48668103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 48668104 . T . PASS END=48668104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 48668105 . G . PASS END=48668111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr2 48668112 . A . PASS END=48668112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr2 48668113 . G . PASS END=48668125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 48668126 . A . PASS END=48668126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 48668127 . A . PASS END=48668128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 48668129 . C . PASS END=48668129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 48668130 . T . PASS END=48668130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 48668131 . G . PASS END=48668132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 48668133 . C . PASS END=48668135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 48668136 . A . PASS END=48668136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 48668137 . G . PASS END=48668147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 48668148 . A . PASS END=48668148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:9,0 chr2 48668149 . G . PASS END=48668149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 48678147 . C . PASS END=48678215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,149,255:40,0 chr2 48681695 . C . PASS END=48681880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:43:0,99,1444:0,99,255:40,0 chr2 48685141 . G . PASS END=48685167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,165,255:40,0 chr2 48685265 . A . PASS END=48685366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:49:0,120,1800:0,131,255:40,0 chr2 48686893 . T . PASS END=48686902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 48686903 . C . PASS END=48686910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:25,0 chr2 48686911 . C . PASS END=48687039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:36,0 chr2 48687040 . G . PASS END=48687057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,67,255:24,0 chr2 48687232 . A . PASS END=48687232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 48687234 . G . PASS END=48687292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:40:0,96,1419:0,96,255:40,0 chr2 48688277 . T . PASS END=48688309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:81:0,113,1800:0,113,255:40,0 chr2 48688310 . G . PASS END=48688371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,142,255:40,0 chr2 48692076 . A . PASS END=48692128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:50:0,120,1800:0,150,255:40,0 chr2 48692632 . C . PASS END=48692781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:32:0,84,1260:0,96,255:40,0 chr2 48698226 . T . PASS END=48698327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:31:0,89,1082:0,89,255:40,0 chr2 48698418 . G . PASS END=48698506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,178,255:40,0 chr2 48701822 . T . PASS END=48701958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:33:0,97,1200:0,97,255:40,0 chr2 48706623 . T . PASS END=48706652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1206:0,92,255:40,0 chr2 48706653 . T . PASS END=48706653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:31,0 chr2 48706654 . C . PASS END=48706680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1211:0,88,255:35,0 chr2 48706681 . C . PASS END=48706681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:28,0 chr2 48706682 . T . PASS END=48706694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:30,0 chr2 48706695 . G . PASS END=48706695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 48707063 . G . PASS END=48707155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:90:39:0,90,1287:0,101,255:40,0 chr2 48713770 . A . PASS END=48713897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:39:0,90,1377:0,90,255:40,0 chr2 48718157 . A . PASS END=48718157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1228:0,72,255:35,0 chr2 48718158 . T . PASS END=48718309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:39:0,86,1425:0,86,255:40,0 chr2 48722818 . C . PASS END=48722910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:45:0,93,1395:0,123,255:40,0 chr2 48725632 . G . PASS END=48725647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1351:0,105,255:36,0 chr2 48725648 . A . PASS END=48725783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1238:0,87,255:40,0 chr2 48725784 . G . PASS END=48725784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 48725785 . G . PASS END=48725832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1156:0,83,255:33,0 chr2 48725833 . A . PASS END=48725842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:23,0 chr2 48725843 . C . PASS END=48725866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,690:0,53,255:19,0 chr2 48725867 . C . PASS END=48725874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,38,255:12,0 chr2 48732703 . A . PASS END=48732735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:65:0,120,1800:0,170,255:40,0 chr2 48734408 . G . PASS END=48734524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,102,1765:0,102,255:40,0 chr2 48737154 . T . PASS END=48737252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,99,1485:0,108,255:40,0 chr2 48738479 . G . PASS END=48738607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:55:0,120,1800:0,165,255:40,0 chr2 48741854 . G . PASS END=48741883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:95:0,120,1800:0,197,255:40,0 chr2 48807773 . A . PASS END=48807795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1232:0,81,255:38,0 chr2 48807796 . A C,T, 50.03 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=2.540;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,1,0:0.474,0.026,0.000:38:6,10,0,0:13,8,1,0:48:85,0,50,571,484,569,607,520,1091,1127:255,0,255:20,0:5.0032e+01,6.4974e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:11,8,14,5:8,11,11,8 chr2 48807797 . T . PASS END=48807833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:39:0,111,1665:0,114,255:40,0 chr2 48807834 . C . PASS END=48807938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:55:0,120,1800:0,151,255:40,0 chr2 48807939 . C . PASS END=48807950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,126,255:40,0 chr2 48807951 . C . PASS END=48807951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:77:66:0,77,2114:0,77,255:40,0 chr2 48807952 . T . PASS END=48807975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,132,255:40,0 chr2 48807976 . T C, 49.98 PASS DP=55;MQ=250.00;MQRankSum=6.356;ReadPosRankSum=-1.305;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,27,0:0.491,0.000:55:12,17,0:16,10,0:48:85,0,50,958,956,1914:255,0,255:28,0:4.9983e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,13,14,13:11,17,18,9 chr2 48807977 . T . PASS END=48808013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,134,255:40,0 chr2 48808014 . T . PASS END=48808114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:39:0,85,1443:0,85,255:40,0 chr2 48808115 . G . PASS END=48808151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,107,1458:0,107,255:40,0 chr2 48808152 . G C, 48.72 PASS DP=43;MQ=249.71;MQRankSum=5.564;ReadPosRankSum=3.412;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,19,0:0.442,0.000:43:9,12,0:15,7,0:47:83,0,50,650,858,1508:255,0,255:23,0:4.8721e+01,7.9988e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,16,7,12:17,7,8,11 chr2 48808153 . A . PASS END=48808188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:36:0,93,1395:0,104,255:38,0 chr2 48808189 . C . PASS END=48808189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,105,255:23,0 chr2 48808190 . C . PASS END=48808191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:34:0,69,1035:0,102,255:23,0 chr2 48808192 . C . PASS END=48808209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:35:0,87,927:0,87,255:34,0 chr2 48808210 . T . PASS END=48808210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr2 48808211 . C . PASS END=48808260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1244:0,94,255:37,0 chr2 48808261 . A . PASS END=48808261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:30,0 chr2 48808262 . G . PASS END=48808556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:34:0,85,1103:0,85,255:40,0 chr2 48808557 . T . PASS END=48808593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,119,1770:0,119,255:40,0 chr2 48808594 . C T, 46.58 PASS DP=50;MQ=250.00;MQRankSum=5.931;ReadPosRankSum=4.802;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,20,0:0.400,0.000:50:16,10,0:14,10,0:46:81,0,50,662,1036,1698:255,0,255:29,0:4.6583e+01,1.1727e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,14,12,8:12,18,12,8 chr2 48808595 . G . PASS END=48808631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:51:0,89,1662:0,89,255:40,0 chr2 48808632 . A . PASS END=48808844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:86:46:0,86,1620:0,86,255:40,0 chr2 48808845 . G . PASS END=48808881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,147,255:40,0 chr2 48808882 . T A, 50.00 PASS DP=55;MQ=250.00;MQRankSum=6.305;ReadPosRankSum=2.894;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,31,0:0.564,0.000:55:11,22,0:13,9,0:48:85,0,48,1072,756,1827:255,0,255:18,0:5.0000e+01,7.4811e-05,5.1420e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,15,16:11,13,18,13 chr2 48808883 . G . PASS END=48808897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,111,1665:0,138,255:40,0 chr2 48808898 . C T, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=1.726;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,26,0:0.605,0.000:43:10,18,0:7,8,0:47:85,0,46,875,600,1474:255,0,255:17,0:5.0000e+01,9.3449e-05,4.9394e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,12,14:10,7,12,14 chr2 48808899 . T . PASS END=48808930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1133:0,80,255:40,0 chr2 48808931 . C . PASS END=48808931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:31,0 chr2 48808932 . T . PASS END=48808935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 48808936 . C . PASS END=48808977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1258:0,98,255:37,0 chr2 48808978 . T . PASS END=48808978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1230:0,47,255:34,0 chr2 48808979 . G . PASS END=48809555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:37:0,93,1358:0,93,255:40,0 chr2 48809556 . C . PASS END=48809592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,102,1512:0,107,255:40,0 chr2 48809593 . G T, 49.92 PASS DP=39;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=3.920;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,19,0:0.487,0.000:39:7,8,0:13,11,0:48:85,0,50,643,707,1350:255,0,255:20,0:4.9923e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,15,7,12:10,10,12,7 chr2 48809594 . G . PASS END=48809630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:37:0,93,1395:0,107,255:38,0 chr2 48809631 . G . PASS END=48809646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:32,0 chr2 48809647 . G . PASS END=48809648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr2 48809649 . G . PASS END=48809649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,82,255:26,0 chr2 48809650 . T . PASS END=48809670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 48809671 . G . PASS END=48809702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr2 48818792 . G . PASS END=48818792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1365:0,108,255:36,0 chr2 48818793 . T . PASS END=48818793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1117:0,58,255:33,0 chr2 48818794 . C . PASS END=48818985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1203:0,88,255:40,0 chr2 48818986 . A . PASS END=48818994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,74,255:24,0 chr2 48822367 . G . PASS END=48822380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:100:0,120,1800:0,255,255:40,0 chr2 48822381 . G A, 49.61 PASS DP=101;MQ=250.00;MQRankSum=8.636;ReadPosRankSum=5.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:54,47,0:0.465,0.000:101:26,24,0:28,23,0:48:84,0,50,1665,1878,3543:255,0,255:40,0:4.9610e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,28,24,23:32,22,23,24 chr2 48822382 . A . PASS END=48822418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:101:0,120,1800:0,255,255:40,0 chr2 48822419 . T . PASS END=48822441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:92:0,120,1800:0,246,255:40,0 chr2 48845014 . A . PASS END=48845022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1441:0,101,255:38,0 chr2 48845023 . C . PASS END=48845023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr2 48845024 . T . PASS END=48845034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,107,1480:0,107,255:38,0 chr2 48847990 . C . PASS END=48848091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,3:101:99:81:0,120,1800:0,172,255:40,0 chr2 48848306 . C . PASS END=48848429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,105,1619:0,105,255:40,0 chr2 48848430 . G . PASS END=48848430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1549:0,77,255:36,0 chr2 48848431 . T . PASS END=48848444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:36:0,90,1350:0,106,255:36,0 chr2 48869541 . C . PASS END=48869596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:83:0,120,1800:0,235,255:40,0 chr2 48872172 . G . PASS END=48872256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:36:0,93,1395:0,97,255:40,0 chr2 48873592 . G . PASS END=48873595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 48873596 . C . PASS END=48873611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,922:0,62,255:25,0 chr2 48873612 . G . PASS END=48873827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,1017:0,81,255:40,0 chr2 48873828 . C . PASS END=48873828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1465:0,79,255:38,0 chr2 48873829 . A . PASS END=48874181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:40:0,84,1260:0,99,255:40,0 chr2 48896861 . G . PASS END=48896861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 48896862 . A . PASS END=48896865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr2 48896866 . T . PASS END=48896867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:24,0 chr2 48896868 . A . PASS END=48896873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:26:0,67,963:0,67,255:27,0 chr2 48896874 . A . PASS END=48897102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,934:0,81,255:40,0 chr2 48897103 . A . PASS END=48897120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:24:0,63,945:0,72,255:26,0 chr2 48897121 . G . PASS END=48897121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr2 48898730 . G . PASS END=48898760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,3:64:99:61:0,120,1800:0,143,255:40,0 chr2 48898761 . A . PASS END=48898797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,157,255:40,0 chr2 48898798 . T A, 230.12 PASS DP=61;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,36,0:0,25,0:180:268,183,0,368,368,368:255,170,0:1,0:2.3012e+02,1.8012e+02,0.0000e+00,3.6489e+02,3.9966e+02,3.6790e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,39:0,0,31,30 chr2 48898799 . A . PASS END=48898819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,142,255:40,0 chr2 48906474 . A . PASS END=48906560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,168,255:40,0 chr2 48906561 . A . PASS END=48906581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,167,255:40,0 chr2 48913942 . C . PASS END=48913942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 48914031 . T . PASS END=48914031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,102,1530:0,138,255:34,0 chr2 48914089 . G . PASS END=48914089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,99,1485:0,132,255:33,0 chr2 48914112 . A . PASS END=48914112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:26,0 chr2 48914126 . T . PASS END=48914126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 48914259 . A . PASS END=48914259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:21,0 chr2 48914283 . T . PASS END=48914283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 48914324 . G . PASS END=48914324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 48914393 . G . PASS END=48914393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 48914422 . A . PASS END=48914422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr2 48914453 . G . PASS END=48914453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 48914536 . A . PASS END=48914536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr2 48914563 . A . PASS END=48914563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 48914644 . A . PASS END=48914644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 48914654 . A . PASS END=48914654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 48914829 . G . PASS END=48914829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr2 48914836 . T . PASS END=48915569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:82:34:0,82,1180:0,82,255:40,1 chr2 48915570 . T . PASS END=48915570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:29,0 chr2 48915571 . G . PASS END=48915584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:31,0 chr2 48915585 . C . PASS END=48915588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 48915589 . T . PASS END=48915601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1047:0,84,255:28,0 chr2 48915602 . A . PASS END=48915602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 48915603 . A . PASS END=48915610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr2 48915611 . G . PASS END=48915613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:25,0 chr2 48915614 . G . PASS END=48915622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 48915623 . C . PASS END=48915627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,77,255:26,0 chr2 48915628 . C . PASS END=48915630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 48915631 . T . PASS END=48915638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 48915639 . A . PASS END=48915642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr2 48915643 . T . PASS END=48915643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 48915644 . A . PASS END=48915833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1119:0,93,255:40,0 chr2 48915834 . G . PASS END=48915870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,108,1620:0,124,255:40,0 chr2 48915871 . A G, 191.00 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,21,0:0,27,0:141:229,144,0,1822,144,1822:255,144,0:0,0:1.9100e+02,1.4100e+02,0.0000e+00,4.5000e+02,1.7577e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,28:0,0,25,23 chr2 48915872 . T . PASS END=48915908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1213:0,91,255:37,0 chr2 48915909 . A . PASS END=48915920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,95,255:31,0 chr2 48915921 . T . PASS END=48915926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 48915927 . A . PASS END=48915934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 48915935 . C . PASS END=48915938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 48915939 . A . PASS END=48915939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:24,0 chr2 48915940 . T . PASS END=48915945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:25,0 chr2 48915946 . G . PASS END=48915947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:27:0,51,765:0,81,255:18,0 chr2 48915948 . C . PASS END=48915960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:20,0 chr2 48915961 . T . PASS END=48915988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 48920387 . C . PASS END=48920403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,187,255:40,0 chr2 48921355 . A . PASS END=48921355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 48921363 . A . PASS END=48921374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,164,255:40,0 chr2 48921375 . T C, 236.14 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,23,0:0,40,0:186:274,189,0,2389,189,2389:255,189,0:0,0:2.3614e+02,1.8614e+02,0.0000e+00,4.5000e+02,2.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,39,24:0,0,29,34 chr2 48921376 . T . PASS END=48921412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,171,255:40,0 chr2 48921413 . G . PASS END=48921443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:69:0,120,1800:0,172,255:40,0 chr2 48925754 . T . PASS END=48925756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 48925757 . T . PASS END=48925757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 48925758 . T . PASS END=48925763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:31,0 chr2 48925764 . G . PASS END=48925764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr2 48925765 . C . PASS END=48925783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:36,0 chr2 48925784 . C . PASS END=48925929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,95,255:40,0 chr2 48925930 . A . PASS END=48925939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,945:0,80,255:26,0 chr2 48925945 . C . PASS END=48925945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:45:30:0,45,675:0,90,255:15,0 chr2 48936087 . A . PASS END=48936117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1174:0,93,255:34,0 chr2 48936118 . C . PASS END=48936118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:30,0 chr2 48936119 . T . PASS END=48936133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr2 48936134 . C . PASS END=48936139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 48936140 . A . PASS END=48936140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 48936141 . T . PASS END=48936144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:25,0 chr2 48936145 . C . PASS END=48936148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 48936149 . T . PASS END=48936151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 48936152 . C . PASS END=48936157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 48936158 . C . PASS END=48936158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 48936159 . T . PASS END=48936159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 48936160 . C . PASS END=48936161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 48941125 . A . PASS END=48941193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,108,1438:0,108,255:40,0 chr2 48948825 . C . PASS END=48948888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1275:0,87,255:40,0 chr2 48948889 . T . PASS END=48948889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:32,0 chr2 48948890 . T . PASS END=48948915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1124:0,83,255:33,0 chr2 48948916 . G . PASS END=48948918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 48950595 . A . PASS END=48950672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,120,1800:0,126,255:40,0 chr2 48950758 . T . PASS END=48950758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 48950761 . A . PASS END=48950835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,141,255:40,0 chr2 48950850 . A . PASS END=48950850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,111,1665:0,153,255:37,0 chr2 48952813 . A . PASS END=48952813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 48952815 . A . PASS END=48952889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,148,255:40,0 chr2 48956292 . A . PASS END=48956530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:90:38:0,90,1350:0,109,255:40,0 chr2 48958365 . C . PASS END=48958437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:58:0,120,1800:0,150,255:40,0 chr2 48960032 . G . PASS END=48960034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 48960035 . T . PASS END=48960045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 48960046 . G . PASS END=48960064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:26,0 chr2 48982641 . T . PASS END=48982641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 48982650 . A . PASS END=48982664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr2 48982665 . G . PASS END=48982744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,994:0,80,255:32,0 chr2 48982745 . T . PASS END=48982756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:23,0 chr2 48982757 . C . PASS END=48982757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 48982758 . T . PASS END=48982758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,2 chr2 48982759 . G . PASS END=48982761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,1000:0,21,255:27,2 chr2 48982762 . G . PASS END=48982762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 48982763 . C . PASS END=48982784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1260:0,89,255:32,0 chr2 48982785 . T . PASS END=48982785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:31,0 chr2 48982786 . G . PASS END=48982810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1208:0,83,255:34,0 chr2 48982842 . G . PASS END=48982842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 49003419 . C . PASS END=49003454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:77:0,120,1800:0,209,255:40,0 chr2 49189298 . A . PASS END=49189298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 49189551 . T . PASS END=49189551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 49189673 . T . PASS END=49189673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 49189699 . C . PASS END=49189699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 49189872 . T . PASS END=49189883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1369:0,106,255:40,0 chr2 49189884 . T . PASS END=49189920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:42:0,96,1534:0,96,255:40,0 chr2 49189921 . C T, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=4.539;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,26,0:0.578,0.000:45:10,16,0:9,10,0:47:85,0,48,783,614,1397:255,0,255:18,0:5.0000e+01,7.7659e-05,5.1034e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,6,13,13:12,7,11,15 chr2 49189922 . T . PASS END=49189958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:43:0,113,1567:0,113,255:40,0 chr2 49189959 . T . PASS END=49190571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:37:0,85,1343:0,85,255:40,1 chr2 49190572 . A . PASS END=49190572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1502:0,74,255:39,0 chr2 49190573 . T . PASS END=49191003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:42:0,90,1527:0,90,255:40,0 chr2 49191004 . T . PASS END=49191040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,119,1568:0,119,255:40,0 chr2 49191041 . C T, 44.51 PASS DP=48;MQ=250.00;MQRankSum=5.739;ReadPosRankSum=1.587;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,18,0:0.375,0.000:48:12,11,0:18,7,0:44:79,0,50,633,1057,1690:255,0,255:25,0:4.4511e+01,1.7551e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,19,9,9:21,9,6,12 chr2 49191042 . C . PASS END=49191060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:35:0,80,1304:0,80,255:37,0 chr2 49191061 . T . PASS END=49191061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1004:0,71,255:32,0 chr2 49191062 . C . PASS END=49191076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1241:0,86,255:34,0 chr2 49191077 . A . PASS END=49191077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1057:0,52,255:29,0 chr2 49191078 . T . PASS END=49191078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 49191079 . T . PASS END=49191089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1148:0,83,255:31,0 chr2 49191090 . T . PASS END=49191090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1113:0,68,255:29,0 chr2 49191091 . G . PASS END=49191092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 49191093 . A . PASS END=49191093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr2 49191094 . T . PASS END=49191095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr2 49191096 . A . PASS END=49191104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:26,0 chr2 49191105 . G . PASS END=49191105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 49194630 . T . PASS END=49194633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,173,255:40,0 chr2 49195837 . A . PASS END=49195844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr2 49195845 . T . PASS END=49195845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:28,0 chr2 49195846 . C . PASS END=49195858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1042:0,87,255:30,0 chr2 49195859 . A . PASS END=49195859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,888:0,73,255:29,0 chr2 49195860 . G . PASS END=49196022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1105:0,85,255:40,0 chr2 49196124 . A . PASS END=49196225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,120,1800:0,124,255:40,0 chr2 49210051 . A . PASS END=49210125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:82:67:0,82,1800:0,82,255:40,0 chr2 49210237 . A . PASS END=49210305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,157,255:40,0 chr2 49216116 . A . PASS END=49216193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,221,255:40,0 chr2 49217695 . A . PASS END=49217695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 49217705 . A . PASS END=49217776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:64:0,120,1800:0,159,255:40,0 chr2 49241836 . C . PASS END=49241876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:113:0,120,1800:0,255,255:40,0 chr2 49242002 . C . PASS END=49242086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:96:42:0,96,1575:0,96,255:40,0 chr2 49244628 . A . PASS END=49244702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,168,255:40,0 chr2 49247225 . A . PASS END=49247299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:40:0,89,1245:0,89,255:40,0 chr2 49247310 . A . PASS END=49247310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 49295358 . A . PASS END=49295429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,145,255:40,0 chr2 49295440 . A . PASS END=49295440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,116,1687:0,116,255:40,0 chr2 49381405 . A . PASS END=49381406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 49381407 . T . PASS END=49381407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 49381408 . T . PASS END=49381408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 49381409 . C . PASS END=49381409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 49381410 . A . PASS END=49381413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr2 49381414 . G . PASS END=49381414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 49381415 . C . PASS END=49381547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:31:0,85,1180:0,85,255:40,0 chr2 49381548 . C . PASS END=49381556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:40:0,95,1449:0,95,255:36,0 chr2 49381614 . A . PASS END=49381614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 49381652 . T . PASS END=49381652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,79,255:25,0 chr2 50145690 . A . PASS END=50145690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 50145736 . A . PASS END=50145736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 50145804 . A . PASS END=50145804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,167,255:40,0 chr2 50145878 . G . PASS END=50145878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 50145896 . T . PASS END=50145896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr2 50145959 . G A, 50.00 PASS DP=43;MQ=249.91;MQRankSum=5.099;ReadPosRankSum=1.969;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,24,0:0.558,0.000:43:9,14,0:10,10,0:48:85,0,49,858,664,1522:255,0,255:18,0:5.0000e+01,7.1964e-05,5.1825e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,10,14:11,8,12,12 chr2 50146247 . A . PASS END=50146247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr2 50146295 . T . PASS END=50146295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 50146316 . T . PASS END=50146316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 50146337 . C . PASS END=50146337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:22,0 chr2 50146406 . T . PASS END=50146406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 50146453 . T . PASS END=50146453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 50146547 . G . PASS END=50146547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 50146568 . T . PASS END=50146568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 50146692 . A . PASS END=50146692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:54:0,120,1800:0,129,255:40,0 chr2 50146696 . T . PASS END=50146696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 50146697 . T . LowGQ END=50146697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,11:54:0:54:0,0,1241:234,0,255:40,8 chr2 50146705 . A . PASS END=50146705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr2 50146709 . C . PASS END=50146709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 50146784 . G . PASS END=50146784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 50146796 . G . PASS END=50146797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,174,255:40,0 chr2 50146860 . T . PASS END=50146860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,187,255:40,0 chr2 50146966 . G . PASS END=50146966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 50147057 . A . PASS END=50147057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 50147240 . T . PASS END=50147240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 50147357 . C . PASS END=50147357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,218,255:40,0 chr2 50147499 . A . PASS END=50147499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 50147558 . A . PASS END=50147558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 50147693 . A . PASS END=50147693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:75:0,120,1800:0,208,255:40,0 chr2 50147734 . G . PASS END=50147734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 50147764 . T . PASS END=50147764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 50147992 . C . PASS END=50147992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:55:0,120,1800:0,132,255:40,0 chr2 50148023 . T . PASS END=50148023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 50148063 . C . PASS END=50148063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,108,1620:0,155,255:36,0 chr2 50148202 . T . PASS END=50148202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 50148268 . C . PASS END=50148268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 50148279 . G . PASS END=50148279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 50148289 . G . PASS END=50148289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,105,1575:0,135,255:35,0 chr2 50148462 . T . PASS END=50148462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 50148468 . C . PASS END=50148468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 50148500 . C . PASS END=50148500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 50148555 . T . PASS END=50148555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 50148647 . A . PASS END=50148648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 50148697 . C . PASS END=50148697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 50148699 . T . PASS END=50148699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 50148701 . G . PASS END=50148701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 50148763 . A . PASS END=50148763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 50148850 . C . PASS END=50148850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 50148984 . T . PASS END=50148984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 50149070 . A . PASS END=50149070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr2 50149082 . T . PASS END=50149347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:36:0,85,1349:0,85,255:40,0 chr2 50149348 . A . PASS END=50149348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr2 50149349 . G . PASS END=50149349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1335:0,80,255:34,0 chr2 50149350 . C . PASS END=50149352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:32,0 chr2 50149353 . G . PASS END=50149365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1101:0,82,255:31,0 chr2 50149366 . T . PASS END=50149366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 50149367 . G . PASS END=50149368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 50149369 . C . PASS END=50149379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr2 50149380 . G . PASS END=50149389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:21:0,54,810:0,63,255:19,0 chr2 50153452 . T . PASS END=50153454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,129,255:40,0 chr2 50153455 . A . PASS END=50153455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,10:71:23:71:0,23,1518:0,23,255:40,0 chr2 50153456 . T . PASS END=50153456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,197,255:40,0 chr2 50153457 . C . PASS END=50153457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,8:71:79:71:0,79,1699:0,79,255:40,0 chr2 50153458 . C . PASS END=50153458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,7:72:48:72:0,48,1781:0,48,255:40,0 chr2 50153459 . T . PASS END=50153528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:71:0,120,1800:0,186,255:40,0 chr2 50170842 . C . PASS END=50170912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1260:0,103,255:40,0 chr2 50170913 . A . PASS END=50170924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:25,0 chr2 50170925 . G . PASS END=50170925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr2 50170926 . T . PASS END=50170929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 50201103 . T . PASS END=50201109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 50201110 . A G, 221.56 PASS DP=58;MQ=249.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,23,0:0,35,0:172:259,175,0,2248,175,2248:255,175,0:0,0:2.2156e+02,1.7156e+02,0.0000e+00,4.5000e+02,2.0633e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,27:0,0,26,32 chr2 50201111 . A . PASS END=50201138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,160,255:40,0 chr2 50251048 . T . PASS END=50251062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,134,255:40,0 chr2 50251063 . G . PASS END=50251099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,146,255:40,0 chr2 50251100 . A G, 49.24 PASS DP=75;MQ=250.00;MQRankSum=7.413;ReadPosRankSum=2.740;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,34,0:0.453,0.000:75:19,22,0:22,12,0:48:84,0,50,1200,1451,2650:255,0,255:40,0:4.9242e+01,7.3517e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,15,13,21:24,17,15,19 chr2 50251101 . T . PASS END=50251137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:75:0,120,1800:0,209,255:40,0 chr2 50251138 . A . PASS END=50251251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:48:0,105,1575:0,136,255:40,0 chr2 50279216 . T . PASS END=50279317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:82:71:0,82,1753:0,82,255:40,0 chr2 50280406 . C . PASS END=50280406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 50280409 . C . PASS END=50280592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:87:38:0,87,1349:0,87,255:40,0 chr2 50280593 . T . PASS END=50280593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:29,0 chr2 50280594 . C . PASS END=50280625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1350:0,95,255:34,0 chr2 50280626 . C . PASS END=50280628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,105,255:23,0 chr2 50280629 . T . PASS END=50280646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,96,255:33,0 chr2 50280647 . A . PASS END=50280647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1097:0,58,255:31,0 chr2 50280648 . G . PASS END=50280673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1279:0,89,255:35,0 chr2 50280674 . T . PASS END=50280674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,991:0,65,255:29,0 chr2 50280675 . C . PASS END=50280685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1133:0,90,255:30,0 chr2 50280686 . A . PASS END=50280686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 50280687 . T . PASS END=50280689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 50280690 . T . PASS END=50280690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr2 50280691 . T . PASS END=50280699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 50280700 . T . PASS END=50280700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:26,0 chr2 50280701 . T . PASS END=50280703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 50280704 . C . PASS END=50280728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,923:0,64,255:26,0 chr2 50282093 . C . PASS END=50282174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1125:0,80,255:40,0 chr2 50282175 . A . PASS END=50282182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1100:0,77,255:26,0 chr2 50318453 . T . PASS END=50318453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 50318461 . C . PASS END=50318465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 50318466 . G . PASS END=50318632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:34:0,99,1366:0,100,255:40,0 chr2 50318634 . T . PASS END=50318634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,108,1620:0,138,255:36,0 chr2 50412741 . C . PASS END=50412788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,125,255:40,0 chr2 50434829 . T . PASS END=50434840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,145,255:40,0 chr2 50463927 . T . PASS END=50464108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:89:33:0,89,1235:0,89,255:40,0 chr2 50464111 . G . PASS END=50464111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1115:0,99,255:33,0 chr2 50573829 . C . PASS END=50573844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:13,0 chr2 50573845 . G . PASS END=50573845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 50573846 . G . PASS END=50573854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 50573855 . G . PASS END=50573872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:17,0 chr2 50573873 . G . PASS END=50573873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 50573874 . G . PASS END=50573889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr2 50573890 . G . PASS END=50573891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 50573892 . T . PASS END=50573944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:18,0 chr2 50573945 . G . PASS END=50573945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr2 50573946 . C . PASS END=50573968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 50573969 . G . PASS END=50573977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 50573978 . A . PASS END=50573995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:12:5:0,12,180:0,15,194:6,0 chr2 50573996 . A . PASS END=50574087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,31:0,3,31:3,0 chr2 50665167 . T A, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.293;ReadPosRankSum=1.671;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,28,0:0.519,0.000:54:13,10,0:13,18,0:48:85,0,50,934,914,1848:255,0,255:26,0:5.0000e+01,6.5492e-05,5.2929e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,6,11,17:13,13,15,13 chr2 50679436 . C . PASS END=50679436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 50692571 . G . PASS END=50692571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1328:0,111,255:37,0 chr2 50692577 . T . PASS END=50692577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1465:0,104,255:39,0 chr2 50692580 . G . PASS END=50692699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:39:0,101,1441:0,101,255:40,0 chr2 50692701 . T . PASS END=50692701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 50692703 . C . PASS END=50692703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 50692709 . A . PASS END=50692709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1404:0,111,255:37,0 chr2 50693599 . C . PASS END=50693625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,0:131:99:124:0,120,1800:0,255,255:40,0 chr2 50699436 . C . PASS END=50699436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 50699437 . T . PASS END=50699437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 50699438 . T . PASS END=50699438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:23,0 chr2 50699439 . C . PASS END=50699446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr2 50699447 . C . PASS END=50699447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:28,0 chr2 50699448 . T . PASS END=50699448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr2 50699449 . C . PASS END=50699449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 50699450 . T . PASS END=50699450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:31,0 chr2 50699451 . C . PASS END=50699594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:34:0,87,1288:0,94,255:40,0 chr2 50699595 . C . PASS END=50699605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:31:0,60,900:0,89,255:22,0 chr2 50699606 . T . PASS END=50699607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 50699608 . A . PASS END=50699609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr2 50699619 . G . PASS END=50699619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 50723043 . T . PASS END=50723233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:52:0,101,1797:0,101,255:40,0 chr2 50724464 . T . PASS END=50724464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1263:0,99,255:33,0 chr2 50724471 . C . PASS END=50724852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:80:33:0,80,1260:0,80,255:40,1 chr2 50724860 . A . PASS END=50724860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 50733624 . G . PASS END=50733624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 50733628 . T . PASS END=50733628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr2 50733630 . T . PASS END=50733630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 50733633 . C . PASS END=50733755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:31:0,93,1180:0,93,255:40,0 chr2 50733762 . A . PASS END=50733762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 50733765 . A . PASS END=50733765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,117,1755:0,130,255:38,0 chr2 50755763 . T . PASS END=50755789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:115:0,120,1800:0,255,255:40,0 chr2 50758365 . C . PASS END=50758369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 50758370 . T . PASS END=50758370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:21,0 chr2 50758371 . T . PASS END=50758385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,784:0,66,255:26,0 chr2 50758386 . C . PASS END=50758391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 50758392 . C . PASS END=50758392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr2 50758393 . T . PASS END=50758564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:29:0,82,1260:0,82,255:40,0 chr2 50758565 . G . PASS END=50758568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 50765391 . C . PASS END=50765394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:22:0,66,784:0,66,255:27,0 chr2 50765395 . C . PASS END=50765396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 50765397 . C . PASS END=50765397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 50765398 . A . PASS END=50765398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 50765399 . C . PASS END=50765399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr2 50765400 . A . PASS END=50765611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:31:0,83,1180:0,83,255:40,0 chr2 50765612 . A . PASS END=50765612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr2 50765613 . C . PASS END=50765751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1215:0,102,255:40,0 chr2 50765752 . C . PASS END=50765756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 50765757 . T . PASS END=50765757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:23,0 chr2 50765758 . G . PASS END=50765762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1015:0,71,255:26,0 chr2 50765763 . C . PASS END=50765763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 50765764 . A . PASS END=50765764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 50765765 . G . PASS END=50765765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:25,0 chr2 50765766 . A . PASS END=50765771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr2 50765772 . T . PASS END=50765773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 50765774 . C . PASS END=50765774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 50765787 . G . PASS END=50765787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 50774608 . C . PASS END=50774619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1768:0,120,255:40,0 chr2 50774620 . T . PASS END=50774661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,146,255:40,0 chr2 50779725 . C . PASS END=50780163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:34:0,82,1266:0,82,255:40,0 chr2 50847016 . C . PASS END=50847321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:80:32:0,80,1180:0,80,255:40,0 chr2 50847329 . A . PASS END=50847329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 50848338 . T . PASS END=50848338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 50848343 . C . PASS END=50848387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,161,255:40,0 chr2 50848389 . T . PASS END=50848389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 50850452 . C . PASS END=50850754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,120,1800:0,137,255:40,0 chr2 50850758 . A . PASS END=50850758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 50851972 . T . PASS END=50852002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:33:0,86,1218:0,86,255:40,0 chr2 50852003 . G . PASS END=50852003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1639:0,75,255:40,0 chr2 50852004 . T . PASS END=50852105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:39:0,93,1395:0,101,255:40,0 chr2 50883490 . C . PASS END=50883526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,161,255:40,0 chr2 50985225 . T . PASS END=50985274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,99,1534:0,99,255:40,0 chr2 51025009 . T . PASS END=51025009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr2 51145713 . T . PASS END=51145762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:126,1:127:99:119:0,120,1800:0,255,255:40,0 chr2 51146330 . T . PASS END=51146406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:43:0,93,1395:0,99,255:40,2 chr2 51147140 . T . PASS END=51147144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:131,1:132:99:132:0,120,1800:0,255,255:40,0 chr2 51148966 . T . PASS END=51149018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:92:0,120,1800:0,255,255:40,0 chr2 51149743 . C . PASS END=51149825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:63:0,120,1800:0,189,255:40,0 chr2 51152947 . A . PASS END=51152947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 51153076 . C . PASS END=51153094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:105:0,120,1800:0,255,255:40,0 chr2 51242270 . A . PASS END=51242270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:119:0,120,1800:0,255,255:40,0 chr2 51247657 . T . PASS END=51247657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,252,255:40,0 chr2 51253446 . T . PASS END=51253446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:97:0,120,1800:0,255,255:40,0 chr2 51253507 . A . PASS END=51253507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:108:0,120,1800:0,255,255:40,0 chr2 51253509 . T . PASS END=51253608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:77:0,120,1800:0,215,255:40,0 chr2 51253616 . G . PASS END=51253616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 51254630 . C . PASS END=51254630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 51254640 . C . PASS END=51254645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,670:0,44,255:19,0 chr2 51254646 . T . PASS END=51254676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 51254677 . G . PASS END=51254677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 51254678 . C . PASS END=51254689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 51254690 . G . PASS END=51254692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 51254693 . T . PASS END=51254715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr2 51254716 . A . PASS END=51254716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr2 51254717 . C . PASS END=51254729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:24,0 chr2 51254730 . A . PASS END=51254731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 51254732 . A . PASS END=51254732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 51254733 . C . PASS END=51254770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,50,255:19,0 chr2 51254771 . C . PASS END=51254771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr2 51254772 . C . PASS END=51254775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 51254776 . G . PASS END=51254776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:15,0 chr2 51254777 . C . PASS END=51254793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:17,0 chr2 51254794 . A . PASS END=51254794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 51254795 . T . PASS END=51254797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 51254798 . T . PASS END=51254798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 51254799 . C . PASS END=51254820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr2 51254821 . C . PASS END=51254824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 51254825 . G . PASS END=51254825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:13,0 chr2 51254826 . G . PASS END=51254831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 51254832 . C . PASS END=51254832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 51254833 . C . PASS END=51254837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 51254838 . A . PASS END=51254838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 51254839 . G . PASS END=51254840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 51254841 . A . PASS END=51254841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 51254842 . G . PASS END=51254855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 51254856 . C . PASS END=51254857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:14,0 chr2 51254858 . C . PASS END=51254861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 51254862 . T . PASS END=51254862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr2 51254863 . C . PASS END=51254863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 51254864 . C . PASS END=51254864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 51254865 . A . PASS END=51254871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr2 51254872 . G . PASS END=51254872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 51254873 . A . PASS END=51254875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 51254876 . G . PASS END=51254876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 51254877 . G . PASS END=51254878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 51254879 . T . PASS END=51254879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 51254880 . C . PASS END=51254894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,599:0,48,255:17,0 chr2 51254895 . A . PASS END=51254895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,443:0,18,255:15,0 chr2 51254896 . G . PASS END=51254896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 51254897 . G . PASS END=51254898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 51254899 . C . PASS END=51254899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:15,0 chr2 51254900 . A . PASS END=51254900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,446:0,10,255:13,0 chr2 51254901 . G . PASS END=51254905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr2 51254906 . A . PASS END=51254906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,625:0,32,255:15,0 chr2 51254907 . G . PASS END=51254977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,546:0,41,255:19,0 chr2 51254978 . C . PASS END=51254998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:23,0 chr2 51254999 . A . PASS END=51254999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 51255000 . C . PASS END=51255054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,847:0,62,255:25,0 chr2 51255055 . G . PASS END=51255092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,637:0,51,255:19,0 chr2 51255093 . T . PASS END=51255093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 51255094 . G . PASS END=51255109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 51255110 . G . PASS END=51255110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 51255111 . C . PASS END=51255114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 51255115 . C . PASS END=51255121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 51255122 . C . PASS END=51255122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 51255123 . A . PASS END=51255125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr2 51255126 . A . PASS END=51255126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 51255127 . G . PASS END=51255128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr2 51255129 . T . PASS END=51255129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 51255130 . G . PASS END=51255135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 51255136 . G . PASS END=51255136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 51255137 . C . PASS END=51255147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 51255148 . G . PASS END=51255168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr2 51255169 . C . PASS END=51255178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 51255179 . A . PASS END=51255179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 51255180 . A . PASS END=51255221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr2 51255222 . G . PASS END=51255245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr2 51255246 . A . PASS END=51255264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:11,0 chr2 51255265 . G . PASS END=51255265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 51255266 . C . PASS END=51255267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 51255268 . G . PASS END=51255268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 51255269 . G . PASS END=51255286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 51255287 . C . PASS END=51255288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 51255289 . C . PASS END=51255289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 51255290 . G . PASS END=51255340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,460:0,45,255:16,0 chr2 51255341 . C . PASS END=51255341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 51255342 . A . PASS END=51255346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 51255347 . C . PASS END=51255347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 51255348 . C . PASS END=51255381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,543:0,45,255:16,0 chr2 51255382 . G . PASS END=51255382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 51255383 . C . PASS END=51255411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,568:0,48,255:18,0 chr2 51255415 . C . PASS END=51255415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 51255445 . G . PASS END=51255445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 51255544 . C . PASS END=51255544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 51255565 . T . PASS END=51255565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 51255604 . G . PASS END=51255604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 51255635 . C . PASS END=51255635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 51255643 . A . PASS END=51255643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr2 51255693 . C . PASS END=51255693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr2 51255744 . T . PASS END=51255744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 51255755 . T . PASS END=51255755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 51255782 . T . PASS END=51255782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 51255833 . G . PASS END=51255833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 51255864 . A . PASS END=51255864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:21,0 chr2 51255876 . A . PASS END=51255876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 51255968 . G . PASS END=51255968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 51256055 . T . PASS END=51256055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:32,0 chr2 51256158 . G . PASS END=51256158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr2 51256209 . C . PASS END=51256209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 51256224 . T . PASS END=51256224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 51259112 . T . PASS END=51259112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 51259192 . A . PASS END=51259192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 51259208 . C . PASS END=51259208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr2 51259236 . G . PASS END=51259236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 51259254 . G . PASS END=51259254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 51259300 . A . PASS END=51259300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 51259319 . G . PASS END=51259319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 51259364 . G . PASS END=51259364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 51259416 . G . PASS END=51259416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 51259452 . G . PASS END=51259452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 51259460 . C . PASS END=51259460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 51259467 . T . PASS END=51259467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 51259470 . C . PASS END=51259470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 51259507 . C . PASS END=51259507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 51259531 . G . PASS END=51259531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr2 51259553 . G . PASS END=51259553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 51259563 . A . PASS END=51259563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 51259570 . G . PASS END=51259570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 51259578 . C . PASS END=51259578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 51259592 . C . PASS END=51259592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 51259637 . G . PASS END=51259637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:6:8:0,6,90:0,24,255:2,0 chr2 51259642 . G . PASS END=51259642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:6:8:0,6,90:0,24,255:2,0 chr2 51259644 . AAGAAAGAGAGAGAGAGAGAG AAGAG,A, 50.00 PASS DP=9;MQ=250.00;MQRankSum=1.920;ReadPosRankSum=-1.920;FractionInformativeReads=0.889;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,4,1,0:0.500,0.125,0.000:8:1,3,1,0:2,1,0,0:47:79,0,48,61,145,109,76,149,209,212:92,0,170:2,4:5.0000e+01,8.2836e-05,5.0812e+01,6.1189e+01,1.7445e+02,1.1202e+02,8.1304e+01,1.8343e+02,2.4398e+02,2.2119e+02:0.00,29.00,32.00,29.00,58.00,32.00,34.77,63.77,63.77,37.77:2,1,1,4:2,1,2,3 chr2 51259648 . A . LowGQ END=51259648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,9:11:0:11:0,0,0:255,0,45:1,5 chr2 51259652 . G . LowGQ END=51259652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,6:11:0:11:0,0,0:175,0,161:2,4 chr2 51259671 . A . PASS END=51259671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 53831967 . T . PASS END=53832052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:41:0,81,1488:0,81,255:40,1 chr2 53897640 . T . PASS END=53897645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 53897646 . A . PASS END=53897651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:30,0 chr2 53897652 . A . PASS END=53897652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr2 53897653 . A . PASS END=53897811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:30:0,85,1135:0,85,255:40,0 chr2 53897812 . A . PASS END=53897827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,77,255:26,0 chr2 53921021 . C . PASS END=53921151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:40:0,81,1215:0,101,255:40,0 chr2 53927408 . C . PASS END=53927665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:96:46:0,96,1440:0,112,255:40,0 chr2 53941521 . T . PASS END=53941691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1116:0,87,255:40,0 chr2 53941692 . G . PASS END=53941715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,870:0,71,255:26,0 chr2 53941716 . A . PASS END=53941716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 53941717 . T . PASS END=53941718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 53943703 . T . PASS END=53943704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr2 53943705 . T . PASS END=53943720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,831:0,83,255:29,0 chr2 53943721 . G . PASS END=53943721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 53943722 . C . PASS END=53943849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:29:0,87,1094:0,87,255:40,0 chr2 53943850 . T . PASS END=53943856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 53943857 . A . PASS END=53943858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 53943859 . G . PASS END=53943859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr2 53943860 . C . PASS END=53943869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 53943870 . G . PASS END=53943880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr2 53955849 . C . PASS END=53955984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1288:0,92,255:40,0 chr2 53956595 . C . PASS END=53956596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 53956597 . G . PASS END=53956597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 53956598 . A . PASS END=53956607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 53956608 . T . PASS END=53956608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 53956609 . G . PASS END=53956707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:31:0,87,1305:0,93,255:40,0 chr2 53977920 . C . PASS END=53978022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:35:0,89,1171:0,89,255:40,0 chr2 53978023 . A . PASS END=53978023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:52:47:0,52,1405:0,52,255:38,0 chr2 53978024 . T . PASS END=53978068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1305:0,93,255:40,0 chr2 53978069 . T . PASS END=53978069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 53978070 . C . PASS END=53978072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 53978073 . A . PASS END=53978073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1053:0,38,255:27,0 chr2 53978074 . T . PASS END=53978075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr2 53978076 . A . PASS END=53978076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:24,0 chr2 53978077 . A . PASS END=53978078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 53992514 . C . PASS END=53992546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,102,1437:0,102,255:40,0 chr2 53992547 . A . PASS END=53992547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:46:60:0,46,1749:0,46,255:40,0 chr2 53992548 . G . PASS END=53992722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:42:0,110,1341:0,110,255:40,0 chr2 53995024 . A . PASS END=53995024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:26,0 chr2 53995025 . T . PASS END=53995025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 53995026 . G . PASS END=53995037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,924:0,81,255:29,0 chr2 53995038 . T . PASS END=53995038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 53995039 . T . PASS END=53995043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 53995044 . G . PASS END=53995044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 53995045 . T . PASS END=53995081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1194:0,83,255:34,0 chr2 53995082 . A . PASS END=53995082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:33,0 chr2 53995083 . G . PASS END=53995119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1140:0,85,255:36,0 chr2 53995120 . T . PASS END=53995141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:26,0 chr2 53995142 . G . PASS END=53995146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,58,255:18,0 chr2 53995147 . G . PASS END=53995158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:15:0,33,495:0,45,255:13,0 chr2 53999044 . C . PASS END=53999079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:68:0,120,1800:0,196,255:40,0 chr2 53999082 . A . PASS END=53999084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:61:0,120,1800:0,176,255:40,0 chr2 54001279 . G . PASS END=54001633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:87:39:0,87,1421:0,87,255:40,0 chr2 54001634 . A . PASS END=54001635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:34,0 chr2 54001636 . G . PASS END=54001658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,95,255:36,0 chr2 54001659 . A . PASS END=54001662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr2 54014348 . A . PASS END=54014352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 54014353 . G . PASS END=54014354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 54014355 . A . PASS END=54014355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 54014356 . A . PASS END=54014375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr2 54014376 . G . PASS END=54014458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:19,0 chr2 54014459 . A . PASS END=54014459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 54014460 . G . PASS END=54014478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 54014479 . A . PASS END=54014479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 54014480 . G . PASS END=54014492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 54014493 . G . PASS END=54014493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 54014494 . C . PASS END=54014500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 54014501 . T . PASS END=54014509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 54021482 . C . PASS END=54021586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,154,255:40,0 chr2 54023070 . G . PASS END=54023150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:91:53:0,91,1800:0,91,255:40,0 chr2 54024652 . A . PASS END=54024729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,148,255:40,0 chr2 54024869 . A . PASS END=54024932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:59:0,120,1800:0,161,255:40,0 chr2 54026184 . A . PASS END=54026218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:88:0,120,1800:0,240,255:40,0 chr2 54028534 . A . PASS END=54028757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:41:0,93,1451:0,93,255:40,0 chr2 54028850 . G . PASS END=54028958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1215:0,94,255:40,0 chr2 54028959 . C . PASS END=54028959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:34:0,75,1125:0,85,255:25,0 chr2 54028960 . C . PASS END=54028964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr2 54028965 . A . PASS END=54028973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,83,255:26,0 chr2 54028974 . A . PASS END=54028974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,840:0,51,255:23,0 chr2 54028975 . A . PASS END=54028979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,922:0,62,255:22,0 chr2 54035436 . G . PASS END=54035439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr2 54035440 . A . PASS END=54035440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,712:0,47,255:22,0 chr2 54035441 . T . PASS END=54035451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,913:0,62,255:26,0 chr2 54035452 . C . PASS END=54035453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,976:0,81,255:27,0 chr2 54035454 . A . PASS END=54035454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 54035455 . A . PASS END=54035457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr2 54035458 . A . PASS END=54035458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr2 54035459 . A . PASS END=54035464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr2 54035465 . A . PASS END=54035465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:29,0 chr2 54035466 . T . PASS END=54035466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 54035467 . T . PASS END=54035468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 54035469 . C . PASS END=54035556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1256:0,81,255:40,0 chr2 54035557 . T . PASS END=54035557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1241:0,64,255:31,0 chr2 54035558 . C . PASS END=54035579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:33,0 chr2 54035580 . T . PASS END=54035580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:27,0 chr2 54035581 . C . PASS END=54035582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 54035583 . T . PASS END=54035597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,961:0,65,255:26,0 chr2 54036351 . G . PASS END=54036410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:75:0,120,1800:0,195,255:40,0 chr2 54040086 . G . PASS END=54040206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:28:0,81,1215:0,84,255:40,0 chr2 54040207 . T . PASS END=54040210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr2 54041680 . G . PASS END=54041757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:79:0,120,1800:0,199,255:40,0 chr2 54041997 . G . PASS END=54042052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:82:0,120,1800:0,175,255:40,0 chr2 54042053 . C . PASS END=54042072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,3:73:99:64:0,120,1800:0,130,255:40,0 chr2 54045035 . G . PASS END=54045106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,208,255:40,0 chr2 54053509 . A . PASS END=54053550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:77:0,120,1800:0,192,255:40,0 chr2 54080271 . T . PASS END=54080574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,108,1372:0,108,255:40,0 chr2 54080575 . T . PASS END=54080575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:59:51:0,59,1689:0,59,255:40,0 chr2 54080576 . T . PASS END=54081245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:38:0,93,1467:0,93,255:40,0 chr2 54081246 . A . PASS END=54081246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1488:0,79,255:35,0 chr2 54081247 . G . PASS END=54081410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1186:0,83,255:39,0 chr2 54081411 . G . PASS END=54081411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:30,0 chr2 54081412 . G . PASS END=54081424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,101,255:34,0 chr2 54081425 . A . PASS END=54081425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:31,0 chr2 54081426 . G . PASS END=54081510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1272:0,81,255:40,0 chr2 54081511 . A . PASS END=54081547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,119,1629:0,119,255:40,0 chr2 54081548 . C T, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.755;ReadPosRankSum=3.761;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,28,0:0.596,0.000:47:11,12,0:8,16,0:47:85,0,47,1001,663,1665:255,0,255:16,0:5.0000e+01,8.9049e-05,4.9793e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,6,19,9:9,10,13,15 chr2 54081549 . A . PASS END=54081585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,111,1621:0,111,255:40,0 chr2 54081586 . A . PASS END=54081893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,107,1364:0,107,255:40,0 chr2 54086965 . C . PASS END=54086975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,791:0,69,255:23,0 chr2 54086976 . C . PASS END=54086976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 54086977 . C . PASS END=54086984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 54086985 . C . PASS END=54086985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr2 54086986 . G . PASS END=54087032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,864:0,61,255:25,0 chr2 54087033 . T . PASS END=54087033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 54087034 . G . PASS END=54087041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 54087042 . C . PASS END=54087065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,651:0,41,255:19,0 chr2 54093226 . C . PASS END=54093360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:42:0,103,1706:0,103,255:40,1 chr2 54093884 . C . PASS END=54094017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:38:0,84,1260:0,84,255:40,0 chr2 54096501 . C . PASS END=54096675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:93:37:0,93,1395:0,104,255:40,0 chr2 54101476 . C . PASS END=54101484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1088:0,80,255:32,0 chr2 54101485 . T . PASS END=54101485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 54101486 . T . PASS END=54101595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1163:0,80,255:40,0 chr2 54101596 . T . PASS END=54101614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:68:26:0,68,947:0,68,255:26,0 chr2 54101615 . G . PASS END=54101615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr2 54101616 . A . PASS END=54101628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,868:0,61,255:25,0 chr2 54101629 . T . PASS END=54101629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 54101630 . G . PASS END=54101631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:24,0 chr2 54102764 . T . PASS END=54102892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:62:0,120,1800:0,170,255:40,0 chr2 54112827 . C . PASS END=54112912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:63:0,120,1800:0,158,255:40,0 chr2 54114396 . T . PASS END=54114406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1172:0,85,255:31,0 chr2 54114407 . A . PASS END=54114407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,981:0,79,255:29,0 chr2 54114408 . G . PASS END=54114603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:87:35:0,87,1211:0,88,255:40,1 chr2 54114604 . A . PASS END=54114604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:32,0 chr2 54114995 . C . PASS END=54115126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:89:33:0,89,1174:0,89,255:40,0 chr2 54115858 . C . PASS END=54115876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,108,1335:0,108,255:40,0 chr2 54115877 . C . PASS END=54115877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1831:0,79,255:40,0 chr2 54115878 . T . PASS END=54115949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,155,255:40,0 chr2 54117241 . A . PASS END=54117345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:85:34:0,85,1233:0,85,255:40,0 chr2 54119945 . C . PASS END=54120097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:44:0,119,1645:0,119,255:40,0 chr2 54120811 . C . PASS END=54120936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:74:0,120,1800:0,206,255:40,0 chr2 54122144 . C . PASS END=54122213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,159,255:40,0 chr2 54122720 . T . PASS END=54122873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:96:47:0,96,1440:0,141,255:40,2 chr2 54123941 . T . PASS END=54124022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1274:0,81,255:40,0 chr2 54125007 . C . PASS END=54125013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,114,1354:0,114,255:40,0 chr2 54125014 . A . PASS END=54125014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1204:0,73,255:38,0 chr2 54125015 . C . PASS END=54125136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:39:0,93,1395:0,96,255:40,0 chr2 54125438 . A . PASS END=54125491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,144,255:40,0 chr2 54127018 . C . PASS END=54127154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:51:0,120,1800:0,153,255:40,0 chr2 54128487 . T . PASS END=54128646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:32:0,87,1258:0,93,255:40,0 chr2 54128647 . T . PASS END=54128647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,951:0,76,255:29,0 chr2 54128648 . T . PASS END=54128652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 54128653 . A . PASS END=54128659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1017:0,73,255:25,0 chr2 54128660 . C . PASS END=54128681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:25,0 chr2 54128682 . A . PASS END=54128687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:25:0,42,630:0,62,255:15,0 chr2 54128688 . C . PASS END=54128696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:16:0,39,585:0,48,255:13,0 chr2 54131162 . C . PASS END=54131162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 54131163 . T . PASS END=54131163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54131164 . T . PASS END=54131164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr2 54131165 . G . PASS END=54131170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 54131171 . T . PASS END=54131171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1013:0,57,255:26,0 chr2 54131172 . T . PASS END=54131172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 54131173 . G . PASS END=54131173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 54131174 . C . PASS END=54131293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:31:0,90,1350:0,93,255:40,0 chr2 54133735 . C . PASS END=54133830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:75:0,120,1800:0,216,255:40,0 chr2 54133943 . C . PASS END=54134005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:73:0,120,1800:0,176,255:40,0 chr2 54135457 . C . PASS END=54135555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,101,1620:0,101,255:40,0 chr2 54135647 . C . PASS END=54135702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:67:0,120,1800:0,182,255:40,0 chr2 54135921 . T . PASS END=54135977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:104:0,120,1800:0,255,255:40,0 chr2 54137212 . C . PASS END=54137267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:74:0,120,1800:0,197,255:40,0 chr2 54146288 . A . PASS END=54146342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,133,255:40,0 chr2 54146343 . A . PASS END=54146383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:47:0,96,1440:0,111,255:40,0 chr2 54147330 . C . PASS END=54147487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1108:0,81,255:40,0 chr2 54148026 . C . PASS END=54148026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 54148027 . T . PASS END=54148027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:15,0 chr2 54148028 . T . PASS END=54148031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr2 54148032 . A . PASS END=54148032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 54148033 . G . PASS END=54148044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr2 54148045 . G . PASS END=54148045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:16,0 chr2 54148046 . A . PASS END=54148046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 54148047 . A . PASS END=54148055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:19,0 chr2 54148056 . G . PASS END=54148061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 54148062 . G . PASS END=54148062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 54148063 . C . PASS END=54148069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr2 54148070 . G . PASS END=54148070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54148071 . C . PASS END=54148071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 54148072 . A . PASS END=54148072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54148073 . C . PASS END=54148075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,1116:0,66,255:30,0 chr2 54148076 . T . PASS END=54148078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:33:0,96,1440:0,99,255:35,0 chr2 54148079 . A . PASS END=54148080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1311:0,72,255:36,0 chr2 54148081 . T . PASS END=54148081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:38:0,84,1365:0,84,255:36,0 chr2 54148082 . A . PASS END=54148082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:37,0 chr2 54148083 . T . PASS END=54148086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1413:0,81,255:40,0 chr2 54148087 . G . PASS END=54148087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1433:0,76,255:39,0 chr2 54148088 . T . PASS END=54148097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:41:0,84,1467:0,84,255:40,0 chr2 54148098 . A . PASS END=54148098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1396:0,77,255:40,0 chr2 54148099 . A . PASS END=54148237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:38:0,83,1440:0,83,255:40,0 chr2 54148238 . T . PASS END=54148238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1140:0,72,255:29,0 chr2 54148239 . A . PASS END=54148240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 54148241 . T . PASS END=54148241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1083:0,63,255:28,0 chr2 54149654 . C . PASS END=54149721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:78:0,120,1800:0,211,255:40,0 chr2 54150186 . T . PASS END=54150255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:34:0,102,1266:0,102,255:40,0 chr2 54150458 . C . PASS END=54150556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1042:0,93,255:40,0 chr2 54152676 . C . PASS END=54152826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:34:0,81,1215:0,85,255:40,0 chr2 54153096 . C . PASS END=54153160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,164,255:40,0 chr2 54154531 . T . PASS END=54154620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:66:0,120,1800:0,180,255:40,0 chr2 54155254 . C . PASS END=54155419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:31:0,83,1173:0,83,255:40,0 chr2 54155420 . G . PASS END=54155431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:25,0 chr2 54155432 . G . PASS END=54155432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 54155433 . G . PASS END=54155435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 54155436 . A . PASS END=54155440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:17,0 chr2 54158972 . C . PASS END=54158973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 54158974 . T . PASS END=54158975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:28,0 chr2 54158976 . C . PASS END=54158977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 54158978 . A . PASS END=54158978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr2 54158979 . G . PASS END=54159227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1263:0,84,255:40,0 chr2 54159228 . T . PASS END=54159228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:29,0 chr2 54159229 . T . PASS END=54159237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:32,0 chr2 54159805 . C . PASS END=54159897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:92:58:0,92,1800:0,92,255:40,0 chr2 54161742 . C . PASS END=54161864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:39:0,101,1441:0,101,255:40,0 chr2 54163224 . C . PASS END=54163298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:54:0,120,1800:0,162,255:40,0 chr2 54163901 . C . PASS END=54163964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:49:0,93,1680:0,93,255:40,0 chr2 54164528 . T . PASS END=54164535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1109:0,80,255:31,0 chr2 54164536 . T . PASS END=54164536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,965:0,79,255:30,0 chr2 54164537 . T . PASS END=54164576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:32:0,89,1196:0,89,255:36,0 chr2 54164577 . T . PASS END=54164577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:35,0 chr2 54164578 . T . PASS END=54164677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:34:0,85,1119:0,85,255:40,0 chr2 54167093 . G . PASS END=54167137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:75:0,120,1800:0,197,255:40,0 chr2 54169296 . C . PASS END=54169361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:78:0,120,1800:0,227,255:40,0 chr2 54175558 . T . PASS END=54175674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:90:37:0,90,1374:0,90,255:40,0 chr2 54176280 . T . PASS END=54176420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:44:0,89,1493:0,89,255:40,0 chr2 54197680 . G . PASS END=54197694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr2 54197695 . G . PASS END=54197700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 54197701 . A . PASS END=54197701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 54197702 . A . PASS END=54197728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 54197729 . G . PASS END=54197739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 54197740 . C . PASS END=54197751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr2 54197752 . C . PASS END=54197752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 54197753 . A . PASS END=54197775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 54197776 . T . PASS END=54197776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 54197777 . C . PASS END=54197794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr2 54197795 . G . PASS END=54197796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 54197797 . T . PASS END=54197799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 54197800 . G . PASS END=54197813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 54197814 . C . PASS END=54197816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,543:0,31,255:13,0 chr2 54197817 . G . PASS END=54197821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 54197822 . A . PASS END=54197826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 54197827 . A . PASS END=54197835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 54197836 . T . PASS END=54197897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr2 54197898 . T . PASS END=54197921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,368:0,36,255:12,0 chr2 54200886 . A . PASS END=54200947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:96:0,120,1800:0,240,255:40,0 chr2 54202383 . A . PASS END=54202411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:73:0,120,1800:0,139,255:40,0 chr2 54202412 . C . PASS END=54202443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,3:82:99:77:0,120,1800:0,162,255:40,0 chr2 54212542 . G . PASS END=54212622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,160,255:40,0 chr2 54278095 . A . PASS END=54278096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 54278097 . A . PASS END=54278097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 54278098 . C . PASS END=54278101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:31,0 chr2 54278102 . G . PASS END=54278102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 54278103 . T . PASS END=54278187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:31:0,93,1141:0,93,255:40,0 chr2 54279237 . A . PASS END=54279385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:70:0,120,1800:0,161,255:40,0 chr2 54284376 . C . PASS END=54284497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:71:0,120,1800:0,186,255:40,0 chr2 54292597 . A . PASS END=54292670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,114,1710:0,142,255:40,0 chr2 54342752 . A . PASS END=54342761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 54342762 . T . PASS END=54342766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:28,0 chr2 54342767 . C . PASS END=54342767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 54342768 . T . PASS END=54342774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 54342775 . C . PASS END=54342775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 54342776 . G . PASS END=54342780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 54342781 . A . PASS END=54342781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 54342782 . G . PASS END=54342785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr2 54342786 . C . PASS END=54342786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 54342787 . T . PASS END=54342789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1135:0,90,255:31,0 chr2 54342790 . G . PASS END=54342790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 54342791 . C . PASS END=54342884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1141:0,80,255:37,0 chr2 54342885 . G . PASS END=54342889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:22,0 chr2 54342890 . C . PASS END=54342893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:29:0,48,720:0,87,255:16,0 chr2 54350521 . A . PASS END=54350547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:84:0,120,1800:0,211,255:40,0 chr2 54362590 . G . PASS END=54362606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,1:112:99:111:0,120,1800:0,255,255:40,0 chr2 54365776 . T . PASS END=54365885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:37:0,102,1413:0,107,255:40,0 chr2 54366076 . G . PASS END=54366317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:32:0,80,1155:0,80,255:40,0 chr2 54366318 . C . PASS END=54366326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 54374529 . T . PASS END=54374547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,214,255:40,0 chr2 54395259 . G . PASS END=54395259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 54450134 . A . PASS END=54450155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,140,255:40,0 chr2 54475866 . C . PASS END=54475866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr2 54482056 . T . PASS END=54482071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,848:0,65,255:26,0 chr2 54482072 . C . PASS END=54482074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 54482075 . A . PASS END=54482075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 54482076 . A . PASS END=54482089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,980:0,84,255:30,0 chr2 54482090 . T . PASS END=54482090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:29,0 chr2 54482091 . C . PASS END=54482518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:83:31:0,83,1160:0,83,255:40,0 chr2 54482519 . C . PASS END=54482519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 54482520 . G . PASS END=54482533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 54482534 . C . PASS END=54482534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 54482535 . A . PASS END=54482536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54482537 . A . PASS END=54482554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:23:0,67,817:0,67,255:25,0 chr2 54482555 . A . PASS END=54482555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr2 54482556 . T . PASS END=54482573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,61,255:24,0 chr2 54482574 . C . PASS END=54482594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,601:0,54,255:19,0 chr2 54482595 . G . PASS END=54482595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 54482596 . C . PASS END=54482632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,630:0,40,255:19,0 chr2 54482633 . G . PASS END=54482633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,604:0,2,255:16,0 chr2 54482634 . C . PASS END=54482635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 54482636 . T . PASS END=54482636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 54482637 . C . PASS END=54482637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 54482638 . T . PASS END=54482638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,566:0,20,255:16,0 chr2 54482639 . G . PASS END=54482639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 54482640 . C . PASS END=54482640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 54482641 . A . PASS END=54482641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 54482642 . T . PASS END=54482644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 54482645 . A . PASS END=54482645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr2 54482646 . C . PASS END=54482646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 54482647 . G . LowGQ END=54482647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,565:1,0,255:15,0 chr2 54482648 . G . PASS END=54482652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,651:0,41,255:16,0 chr2 54482653 . C . PASS END=54482653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 54482654 . A . PASS END=54482654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 54482655 . G . PASS END=54482655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:16,0 chr2 54482656 . T . PASS END=54482656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:15,0 chr2 54482657 . T . PASS END=54482658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 54482659 . C . PASS END=54482659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 54482660 . A . LowGQ END=54482660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,490:18,0,255:15,0 chr2 54482661 . G . PASS END=54482661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 54482662 . C . LowGQ END=54482663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,377:18,0,255:15,0 chr2 54482664 . G . PASS END=54482665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:17,0 chr2 54482666 . A . PASS END=54482666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:16,0 chr2 54482667 . T . PASS END=54482667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,545:0,15,255:16,0 chr2 54482668 . G . PASS END=54482669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:21:18:0,21,557:0,21,255:16,0 chr2 54482670 . A . PASS END=54482670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:17,0 chr2 54482671 . C . LowGQ END=54482675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,474:0,0,255:15,0 chr2 54482676 . G . PASS END=54482677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:17,0 chr2 54482678 . G . PASS END=54482678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:14,0 chr2 54482679 . G . PASS END=54482679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,584:0,40,255:15,0 chr2 54482680 . G . PASS END=54482680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,501:0,37,255:15,0 chr2 54482681 . T . PASS END=54482681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 54482682 . T . PASS END=54482682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:14,0 chr2 54482683 . C . LowGQ END=54482685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,422:0,0,255:17,0 chr2 54482686 . G . PASS END=54482686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 54482687 . T . LowGQ END=54482687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,469:23,0,255:13,0 chr2 54482688 . G . PASS END=54482688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:17,0 chr2 54482689 . G . PASS END=54482689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,599:0,40,255:16,0 chr2 54482690 . A . PASS END=54482690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,521:0,24,255:17,0 chr2 54482691 . G . PASS END=54482691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,549:0,10,255:17,0 chr2 54482692 . A . LowGQ END=54482692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,6:20:0:20:0,0,324:40,0,255:14,0 chr2 54482693 . C . PASS END=54482694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,593:0,43,255:18,0 chr2 54482695 . C . PASS END=54482695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:16,0 chr2 54482696 . A . LowGQ END=54482697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,412:39,0,255:13,0 chr2 54482698 . G . PASS END=54482699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,541:0,10,255:14,0 chr2 54482700 . T . LowGQ END=54482702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,361:17,0,255:12,0 chr2 54482703 . G . PASS END=54482708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,546:0,40,255:15,0 chr2 54482709 . C . LowGQ END=54482709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,457:24,0,255:12,0 chr2 54482710 . G . PASS END=54482710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,562:0,26,255:14,0 chr2 54482711 . G . PASS END=54482711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,552:0,5,255:14,0 chr2 54482712 . G . PASS END=54482712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,568:0,13,255:13,0 chr2 54482713 . C . LowGQ END=54482715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,217:21,0,255:14,0 chr2 54482716 . G . PASS END=54482716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,597:0,43,255:15,0 chr2 54482717 . G . PASS END=54482717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,568:0,30,255:16,0 chr2 54482718 . G . LowGQ END=54482719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,6:22:0:21:0,0,357:73,0,255:18,3 chr2 54482720 . C . PASS END=54482720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:18,0 chr2 54482721 . C . PASS END=54482721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,686:0,49,255:20,0 chr2 54482722 . A . LowGQ END=54482722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,7:22:0:22:0,0,304:115,0,255:15,0 chr2 54482723 . G . PASS END=54482723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,627:0,19,255:19,0 chr2 54482724 . G . PASS END=54482724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,668:0,36,255:20,0 chr2 54482725 . C . PASS END=54482725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr2 54482726 . C . PASS END=54482726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 54482727 . C . PASS END=54482727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 54482728 . T . LowGQ END=54482728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,541:14,0,255:18,0 chr2 54482729 . G . PASS END=54482729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:20,0 chr2 54482730 . C . PASS END=54482730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,664:0,52,255:21,0 chr2 54482731 . C . PASS END=54482731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 54482732 . T . PASS END=54482732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,618:0,3,255:17,0 chr2 54482733 . C . PASS END=54482734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 54482735 . C . PASS END=54482735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 54482736 . T . PASS END=54482736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:5:24:0,5,590:0,5,255:18,0 chr2 54482737 . G . PASS END=54482737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,701:0,39,255:19,0 chr2 54482738 . T . PASS END=54482738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:21:24:0,21,449:0,21,255:17,0 chr2 54482739 . T . PASS END=54482740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:20,0 chr2 54482741 . A . PASS END=54482741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,751:0,39,255:19,0 chr2 54482742 . C . PASS END=54482744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:5:24:0,5,562:0,5,255:19,0 chr2 54482745 . C . PASS END=54482746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 54482747 . T . PASS END=54482749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,701:0,30,255:21,0 chr2 54482750 . A . PASS END=54482751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 54482752 . T . PASS END=54482752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 54482753 . G . LowGQ END=54482753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,557:0,0,255:17,0 chr2 54482754 . C . PASS END=54482754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:19,0 chr2 54482755 . T . PASS END=54482755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54482756 . C . PASS END=54482756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,645:0,16,255:19,0 chr2 54482757 . T . LowGQ END=54482758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:21:0,0,618:0,0,255:19,0 chr2 54482759 . T . PASS END=54482759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 54482760 . T . PASS END=54482762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 54482763 . C . LowGQ END=54482763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,587:22,0,255:18,0 chr2 54482764 . T . PASS END=54482765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 54482766 . C . PASS END=54482766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,663:0,3,255:19,0 chr2 54482767 . C . PASS END=54482769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:21,0 chr2 54482770 . C . PASS END=54482770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr2 54482771 . A . PASS END=54482772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 54482773 . G . PASS END=54482774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,651:0,14,255:20,0 chr2 54482775 . C . PASS END=54482775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 54482776 . C . PASS END=54482777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 54482778 . T . PASS END=54482778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,665:0,19,255:20,0 chr2 54482779 . T . LowGQ END=54482779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,673:3,0,255:19,0 chr2 54482780 . T . PASS END=54482780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,752:0,55,255:22,0 chr2 54482781 . C . PASS END=54482781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:22,0 chr2 54482782 . T . PASS END=54482782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr2 54482783 . T . PASS END=54482783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 54482784 . C . PASS END=54482784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:21,0 chr2 54482785 . G . PASS END=54482786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 54482787 . C . PASS END=54482787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 54482788 . T . PASS END=54482788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr2 54482789 . C . PASS END=54482789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:20,0 chr2 54482790 . C . PASS END=54482790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 54482791 . T . PASS END=54482791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,753:0,17,255:19,0 chr2 54482792 . G . PASS END=54482792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:19,0 chr2 54482793 . G . PASS END=54482793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 54482794 . C . PASS END=54482794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 54482795 . T . PASS END=54482795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,715:0,17,255:18,0 chr2 54482796 . T . PASS END=54482796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 54482797 . C . PASS END=54482798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 54482799 . C . PASS END=54482799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,766:0,17,255:18,0 chr2 54482800 . A . PASS END=54482800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 54482801 . T . PASS END=54482801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,759:0,14,255:18,0 chr2 54482802 . C . PASS END=54482802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:20,0 chr2 54482803 . C . PASS END=54482803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 54482804 . A . PASS END=54482804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 54482805 . C . PASS END=54482805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 54482806 . T . PASS END=54482806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr2 54482807 . G . PASS END=54482807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 54482808 . G . PASS END=54482832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,657:0,41,255:19,0 chr2 54482833 . A . PASS END=54482834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 54482835 . G . PASS END=54482835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 54482836 . C . PASS END=54482836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 54482837 . T . PASS END=54482838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 54482839 . C . PASS END=54482839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 54482840 . A . PASS END=54482914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 54482915 . C . PASS END=54482915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 54482916 . C . PASS END=54482936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,540:0,41,255:18,0 chr2 54482937 . C . PASS END=54482937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 54482938 . A . PASS END=54482938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 54482939 . C . PASS END=54482939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 54482940 . C . PASS END=54482942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 54482943 . G . PASS END=54482943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 54482944 . A . PASS END=54482944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 54482945 . A . PASS END=54482945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 54482946 . A . PASS END=54482947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 54482948 . C . PASS END=54482948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr2 54482949 . C . PASS END=54482954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr2 54482955 . T . PASS END=54482955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 54482956 . G . PASS END=54482960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 54482961 . T . PASS END=54482961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 54482962 . G . PASS END=54482962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 54482963 . C . PASS END=54482964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 54482965 . G . PASS END=54482967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 54482968 . A . PASS END=54482968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 54482969 . G . PASS END=54482987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr2 54482988 . C . PASS END=54482990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 54482991 . C . PASS END=54483041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr2 54483042 . C . PASS END=54483048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 54483049 . A . PASS END=54483058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,759:0,47,255:19,0 chr2 54483059 . G . PASS END=54483059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:17,0 chr2 54483060 . C . PASS END=54483061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:18,0 chr2 54483062 . T . PASS END=54483062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr2 54483063 . C . PASS END=54483069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:19,0 chr2 54483070 . G . PASS END=54483079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:21,0 chr2 54483080 . G . PASS END=54483080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 54483081 . T . PASS END=54483081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54483082 . A . PASS END=54483082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 54483083 . T . PASS END=54483086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 54483087 . C . PASS END=54483087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 54483088 . A . PASS END=54483090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr2 54483091 . A . PASS END=54483091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 54483092 . T . PASS END=54483099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:25,0 chr2 54483100 . A . PASS END=54483101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54483102 . C . PASS END=54483107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr2 54483108 . G . PASS END=54483166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1078:0,84,255:37,0 chr2 54483167 . T . PASS END=54483167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:32,0 chr2 54483168 . C . PASS END=54483234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:98:36:0,98,1336:0,98,255:40,0 chr2 54483235 . T . PASS END=54483261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:35,0 chr2 54483262 . G . PASS END=54483271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,77,255:25,0 chr2 54483272 . C A, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=2.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:7,6,0:6,8,0:47:85,0,47,185,185,185:255,0,255:12,0:5.0000e+01,8.8531e-05,4.9824e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,7,3,11:8,5,9,5 chr2 54483273 . T . PASS END=54483273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 54483274 . C . PASS END=54483274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:21,0 chr2 54483275 . T . PASS END=54483283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 54483284 . C . PASS END=54483284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 54483285 . T . PASS END=54483285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 54483286 . C . PASS END=54483288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 54494433 . G . PASS END=54494460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,135,255:40,0 chr2 54531825 . G . PASS END=54531939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:45:0,120,1800:0,135,255:40,0 chr2 54557303 . A . PASS END=54557346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,112,1800:0,112,255:40,0 chr2 54558113 . A . PASS END=54558138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,903:0,78,255:26,0 chr2 54558710 . G . PASS END=54558725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,621:0,51,255:18,0 chr2 54558726 . A . PASS END=54558726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,420:0,37,255:17,0 chr2 54558727 . C . PASS END=54558737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:19,0 chr2 54558738 . G . PASS END=54558747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 54558748 . G . PASS END=54558748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 54558749 . C . PASS END=54558751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 54558752 . T . PASS END=54558752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 54558753 . G . PASS END=54558756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 54558757 . A . PASS END=54558757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,668:0,24,255:20,0 chr2 54558758 . A . PASS END=54558772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,738:0,63,255:23,0 chr2 54558773 . G . PASS END=54558773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 54558774 . C . PASS END=54558775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 54558776 . C . PASS END=54558776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 54558777 . C . PASS END=54558778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 54558779 . G . PASS END=54558779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:19,0 chr2 54558780 . G . PASS END=54558790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 54558791 . T . PASS END=54558791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr2 54558792 . G . PASS END=54558794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr2 54558795 . A . PASS END=54558795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 54558796 . A . PASS END=54558797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 54558798 . T . PASS END=54558798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 54558799 . T . PASS END=54558803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 54558804 . G . PASS END=54558812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr2 54558813 . C . PASS END=54558816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 54558817 . C . PASS END=54558818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 54558819 . A . PASS END=54558820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 54558821 . A . PASS END=54558822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 54558823 . A . PASS END=54558823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 54558824 . C . PASS END=54558824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 54558825 . A . PASS END=54558836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 54558837 . A . PASS END=54558837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 54558838 . C . PASS END=54558838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54558839 . T . PASS END=54558839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr2 54558840 . C . PASS END=54558842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54558843 . T . PASS END=54558843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 54558844 . G . PASS END=54558844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54558845 . G . PASS END=54558852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 54558853 . T . PASS END=54558853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:15,0 chr2 54558854 . C . PASS END=54558857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:15,0 chr2 54558858 . A . PASS END=54558858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr2 54558859 . A . PASS END=54558865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 54558866 . T . PASS END=54558874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 54558875 . G . PASS END=54558882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 54558883 . G . PASS END=54558883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 54561954 . A . PASS END=54562161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:41:0,117,1755:0,123,255:40,0 chr2 54570857 . G . PASS END=54570976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1119:0,83,255:40,0 chr2 54570977 . C . PASS END=54570978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 54570979 . C . PASS END=54570985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 54570986 . A . PASS END=54571001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,919:0,62,255:26,0 chr2 54571002 . G . PASS END=54571002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,851:0,23,255:24,0 chr2 54571003 . T . PASS END=54571003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:25,0 chr2 54571004 . G . PASS END=54571007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,939:0,78,255:26,0 chr2 54571008 . T . PASS END=54571008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:22,0 chr2 54571009 . A . PASS END=54571009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 54571010 . G . PASS END=54571010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:21,0 chr2 54586096 . T . PASS END=54586208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:40:0,90,1319:0,90,255:40,0 chr2 54586209 . A . PASS END=54586209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:31,0 chr2 54586210 . A . PASS END=54586211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 54587340 . A . PASS END=54587340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,968:0,78,255:26,0 chr2 54587341 . G . PASS END=54587341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 54587342 . A . PASS END=54587342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,773:0,39,255:25,0 chr2 54587343 . C . PASS END=54587346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 54587347 . G . PASS END=54587347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 54587348 . A . PASS END=54587377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1016:0,81,255:37,0 chr2 54587378 . C G, 47.82 PASS DP=36;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=3.722;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,15,0:0.417,0.000:36:13,9,0:8,6,0:47:83,0,50,536,743,1279:255,0,255:21,0:4.7817e+01,9.3449e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,9,10,5:12,9,8,7 chr2 54587379 . A . PASS END=54587390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1355:0,95,255:37,0 chr2 54587391 . G . PASS END=54587391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1371:0,70,255:31,0 chr2 54587392 . T . PASS END=54587415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1485:0,104,255:40,0 chr2 54587416 . T . PASS END=54587558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:42:0,94,1575:0,94,255:40,0 chr2 54587559 . G . PASS END=54587595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,99,1485:0,111,255:40,0 chr2 54587596 . C T, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.928;ReadPosRankSum=2.093;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,24,0:0.500,0.000:48:13,11,0:11,13,0:48:85,0,50,830,829,1659:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,13,7,17:10,14,14,10 chr2 54587597 . T . PASS END=54587633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:39:0,93,1395:0,104,255:40,0 chr2 54587634 . A . PASS END=54587647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,96,255:32,0 chr2 54587648 . T . PASS END=54587648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1010:0,79,255:27,0 chr2 54587649 . C . PASS END=54587650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 54587651 . T . PASS END=54587653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:31:0,62,1078:0,62,255:26,0 chr2 54587654 . C . PASS END=54587655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 54587656 . C . PASS END=54587684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:26,0 chr2 54587685 . A . PASS END=54587685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 54587686 . A . PASS END=54587691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 54587692 . C . PASS END=54587699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 54608983 . A . PASS END=54609110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:95:35:0,95,1341:0,95,255:40,0 chr2 54753556 . A . PASS END=54753685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:35:0,83,1189:0,83,255:40,0 chr2 54753686 . G . PASS END=54753686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:29,0 chr2 54753687 . C . PASS END=54753687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 54753688 . A . PASS END=54753688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:27,0 chr2 54753689 . T . PASS END=54753690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:31,0 chr2 54753691 . A . PASS END=54753691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1097:0,72,255:29,0 chr2 54753692 . A . PASS END=54753697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1105:0,93,255:31,0 chr2 54753698 . T . PASS END=54753698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 54753699 . G . PASS END=54753701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 54753702 . A . PASS END=54753702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:29,0 chr2 54753703 . G . PASS END=54753703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 54785916 . A . PASS END=54785931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:18,0 chr2 54785932 . C . PASS END=54785940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr2 54785941 . T . PASS END=54786024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 54826229 . A . PASS END=54826348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,993:0,80,255:40,0 chr2 54826349 . A . PASS END=54826349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:29,0 chr2 54826350 . G . PASS END=54826352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:29,0 chr2 54826353 . G . PASS END=54826353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr2 54826354 . C . PASS END=54826360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:30,0 chr2 54826361 . T . PASS END=54826361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 54826362 . C . PASS END=54826364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 54826365 . C . PASS END=54826365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 54826366 . T . PASS END=54826366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1001:0,51,255:25,0 chr2 54826367 . C . PASS END=54826380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,970:0,67,255:25,0 chr2 54839298 . C . PASS END=54839313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1241:0,99,255:33,0 chr2 54839314 . G . PASS END=54839322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1119:0,80,255:32,0 chr2 54839323 . G . PASS END=54839323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 54839324 . C . PASS END=54839330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:33,0 chr2 54839331 . T . PASS END=54839331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:29,0 chr2 54839332 . G . PASS END=54839469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,87,255:40,0 chr2 54839470 . A . PASS END=54839471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 54843344 . A . PASS END=54843435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,113,1567:0,113,255:40,0 chr2 54844745 . G . PASS END=54844752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,131,255:40,0 chr2 54844753 . A . PASS END=54844789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,120,255:40,0 chr2 54844790 . C T, 215.54 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,30,0:0,26,0:166:253,169,0,2171,169,2171:255,169,0:0,0:2.1554e+02,1.6554e+02,0.0000e+00,4.5000e+02,2.0031e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,30:0,0,36,20 chr2 54844791 . G . PASS END=54844825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,110,1435:0,110,255:40,0 chr2 54845215 . G . PASS END=54845330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,109,1634:0,109,255:40,0 chr2 54848537 . A . PASS END=54848649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:83:43:0,83,1525:0,83,255:40,1 chr2 54849437 . G . PASS END=54849624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:43:0,113,1529:0,113,255:40,0 chr2 54850616 . A . PASS END=54850616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,874:0,67,255:27,0 chr2 54850617 . T . PASS END=54850618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 54850619 . T . PASS END=54850619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 54850620 . A . PASS END=54850721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1049:0,83,255:40,0 chr2 54850722 . G . PASS END=54850733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,945:0,65,255:26,0 chr2 54851941 . G . PASS END=54852088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,1194:0,82,255:40,0 chr2 54852089 . T . PASS END=54852099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:31:0,60,900:0,77,255:25,0 chr2 54853069 . G . PASS END=54853080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:22,0 chr2 54853081 . T . PASS END=54853081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,703:0,52,255:21,0 chr2 54853082 . T . PASS END=54853094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:25,0 chr2 54853095 . A . PASS END=54853095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 54853096 . G . PASS END=54853096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54853097 . T . PASS END=54853097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,931:0,45,255:26,0 chr2 54853098 . T . PASS END=54853100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54853101 . G . PASS END=54853101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 54853102 . G . PASS END=54853105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr2 54853106 . C . PASS END=54853122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,848:0,64,255:26,0 chr2 54853123 . G . PASS END=54853123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr2 54853124 . C . PASS END=54853132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr2 54853133 . C . PASS END=54853133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,816:0,9,255:23,0 chr2 54853134 . A . PASS END=54853157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr2 54853158 . T . PASS END=54853334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1083:0,82,255:40,0 chr2 54853335 . A . PASS END=54853335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:35,0 chr2 54853336 . A . PASS END=54853355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1194:0,83,255:37,0 chr2 54853356 . G . PASS END=54853369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,81,255:25,0 chr2 54853370 . A . PASS END=54853370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:19,0 chr2 54853371 . G . PASS END=54853371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 54855234 . G . PASS END=54855236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr2 54855237 . C . PASS END=54855237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 54855238 . T . PASS END=54855387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:30:0,80,1135:0,80,255:40,0 chr2 54856070 . G . PASS END=54856086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,909:0,78,255:26,0 chr2 54856087 . C . PASS END=54856138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,994:0,80,255:32,0 chr2 54856139 . T . PASS END=54856139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr2 54856140 . T . PASS END=54856147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 54856148 . T . PASS END=54856162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:26,0 chr2 54856163 . G . PASS END=54856166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 54856167 . C . PASS END=54856181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 54856182 . C . PASS END=54856184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 54856185 . C . PASS END=54856223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr2 54856224 . A . PASS END=54856224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr2 54856225 . G . PASS END=54856234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 54856235 . G . PASS END=54856242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 54856243 . G . PASS END=54856266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,738:0,60,255:21,0 chr2 54856267 . T . PASS END=54856280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 54856281 . G . PASS END=54856282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 54856283 . C . PASS END=54856288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 54856289 . T . PASS END=54856291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 54856292 . T . PASS END=54856327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr2 54856328 . A . PASS END=54856352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,63,255:23,0 chr2 54856353 . T . PASS END=54856353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 54856354 . G . PASS END=54856378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:26,0 chr2 54856379 . A . PASS END=54856381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 54856382 . T . PASS END=54856440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,909:0,68,255:26,0 chr2 54856441 . G . PASS END=54856450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 54856451 . C . PASS END=54856453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:25,0 chr2 54856454 . A . PASS END=54856459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 54856460 . A . PASS END=54856463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr2 54856464 . G . PASS END=54856465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 54856466 . T . PASS END=54856466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:26,0 chr2 54856467 . C . PASS END=54856469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 54856470 . G . PASS END=54856470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:27,0 chr2 54856471 . G . PASS END=54856475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54856476 . T . PASS END=54856490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 54856491 . G . PASS END=54856493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 54856494 . G . PASS END=54856494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 54856495 . G . PASS END=54856496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 54856497 . G . PASS END=54856514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,978:0,65,255:26,0 chr2 54856515 . G . PASS END=54856528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 54856529 . C . PASS END=54856529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 54856530 . T . PASS END=54856533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 54856534 . G . PASS END=54856581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,801:0,69,255:26,0 chr2 54856582 . G . PASS END=54856588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 54856589 . G . PASS END=54856594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 54856595 . A . PASS END=54856602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 54856603 . T . PASS END=54856608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr2 54856609 . C . PASS END=54856610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr2 54856611 . G . PASS END=54856617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54856618 . G . PASS END=54856618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 54856619 . T . PASS END=54856627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr2 54856628 . A . PASS END=54856628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr2 54856629 . C . PASS END=54856636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:22,0 chr2 54856637 . T . PASS END=54856637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 54856638 . G . PASS END=54856641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,799:0,66,255:22,0 chr2 54856642 . G . PASS END=54856642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 54856643 . A . PASS END=54856655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr2 54856656 . T . PASS END=54856656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 54856657 . T . PASS END=54856657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 54856658 . A . PASS END=54856662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 54856663 . C . PASS END=54856664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 54856665 . C . PASS END=54856665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 54856666 . A . PASS END=54856668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 54856669 . C . PASS END=54856669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr2 54856670 . T . PASS END=54856677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr2 54856678 . C . PASS END=54856678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,698:0,11,255:19,0 chr2 54856679 . T . PASS END=54856680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 54856681 . C . PASS END=54856681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 54856682 . A . PASS END=54856685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr2 54856686 . A . PASS END=54856686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 54856687 . C . PASS END=54856688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 54856689 . A . PASS END=54856689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,647:0,32,255:20,0 chr2 54856690 . G . PASS END=54856694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 54856695 . C . PASS END=54856695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 54856696 . G . PASS END=54856699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr2 54856700 . T . PASS END=54856700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:17,0 chr2 54856701 . C . PASS END=54856714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:41:19:0,41,665:0,41,255:19,0 chr2 54856715 . C . PASS END=54856715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54856716 . C . PASS END=54856716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 54856717 . G . PASS END=54856717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 54856718 . A . PASS END=54856738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,576:0,40,255:19,0 chr2 54856739 . G . PASS END=54856740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54856741 . C . PASS END=54856752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 54856753 . G . PASS END=54856758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 54856759 . C . PASS END=54856759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:18,0 chr2 54856760 . G . PASS END=54856800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr2 54856801 . G . PASS END=54856803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 54856804 . C . PASS END=54856811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:22,0 chr2 54856812 . C . PASS END=54856812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:22,0 chr2 54856813 . A . PASS END=54856842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,886:0,72,255:25,0 chr2 54856843 . G . PASS END=54856844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 54856845 . T . PASS END=54856846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr2 54856847 . A . PASS END=54856847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 54856848 . T . PASS END=54856849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 54856850 . C . PASS END=54856927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1097:0,83,255:32,0 chr2 54856928 . T . PASS END=54856928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 54856929 . C . PASS END=54856934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 54856935 . G . PASS END=54856935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 54856936 . C . PASS END=54856937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 54856938 . C . PASS END=54856940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 54857029 . A . PASS END=54857035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1140:0,90,255:31,0 chr2 54857036 . A . PASS END=54857036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr2 54857037 . G . PASS END=54857047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:29,0 chr2 54857048 . G . PASS END=54857048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 54857049 . A . PASS END=54857119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1155:0,80,255:38,0 chr2 54857120 . C . PASS END=54857142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr2 54857143 . C . PASS END=54857143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr2 54857144 . C . PASS END=54857147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 54857148 . A . PASS END=54857166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,607:0,46,255:19,0 chr2 54857992 . G . PASS END=54858002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr2 54858003 . T . PASS END=54858022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:23,0 chr2 54858023 . A . PASS END=54858023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 54858024 . A . PASS END=54858027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,742:0,72,255:24,0 chr2 54858028 . G . PASS END=54858028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 54858029 . G . PASS END=54858029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr2 54858030 . A . PASS END=54858035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 54858036 . T . PASS END=54858036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:21,0 chr2 54858037 . C . PASS END=54858043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr2 54858044 . G . PASS END=54858044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 54858045 . C . PASS END=54858045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr2 54858046 . C . PASS END=54858047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 54858048 . T . PASS END=54858048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr2 54858049 . G . PASS END=54858057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 54858058 . G . PASS END=54858058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 54858059 . A . PASS END=54858099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1072:0,80,255:32,0 chr2 54858100 . G . PASS END=54858101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 54858102 . A . PASS END=54858115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1178:0,93,255:31,0 chr2 54858116 . A . PASS END=54858116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:27,0 chr2 54858117 . T . PASS END=54858117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 54858118 . C . PASS END=54858118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:27,0 chr2 54858119 . G . PASS END=54858121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1260:0,96,255:31,0 chr2 54858122 . T . PASS END=54858122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 54858123 . C . PASS END=54858153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1210:0,86,255:32,0 chr2 54858154 . C T, 49.93 PASS DP=31;MQ=250.00;MQRankSum=4.724;ReadPosRankSum=1.680;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,15,0:0.484,0.000:31:7,6,0:9,9,0:48:85,0,50,528,572,1101:255,0,255:15,0:4.9928e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,10,5:10,6,11,4 chr2 54858155 . G . PASS END=54858158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 54858159 . T . PASS END=54858176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 54858177 . T . PASS END=54858177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:23,0 chr2 54858178 . G . PASS END=54858187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:24,0 chr2 54858188 . G . PASS END=54858191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1180:0,83,255:29,0 chr2 54858192 . G . PASS END=54858212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1172:0,83,255:33,0 chr2 54858213 . C . PASS END=54858213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr2 54858214 . A . PASS END=54858220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1002:0,85,255:33,0 chr2 54858221 . A . PASS END=54858221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:31,0 chr2 54858222 . G . PASS END=54858256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:34,0 chr2 54858257 . G . PASS END=54858257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:29,0 chr2 54858258 . A . PASS END=54858266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 54858267 . A . PASS END=54858270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 54858271 . G . PASS END=54858282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1194:0,83,255:29,0 chr2 54858283 . C . PASS END=54858283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 54858284 . C . PASS END=54858285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr2 54858286 . G . PASS END=54858286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 54858287 . T . PASS END=54858290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1157:0,93,255:31,0 chr2 54858291 . G . PASS END=54858291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 54858292 . G . PASS END=54858294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1178:0,93,255:31,0 chr2 54858295 . G . PASS END=54858295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 54858296 . G . PASS END=54858326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1109:0,80,255:31,0 chr2 54858327 . A . PASS END=54858342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:27:0,73,1033:0,73,255:26,0 chr2 54858343 . C . PASS END=54858345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 54858346 . A . PASS END=54858414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,793:0,61,255:26,0 chr2 54858415 . G . PASS END=54858417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 54858418 . C . PASS END=54858422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 54858423 . G . PASS END=54858423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 54858424 . G . PASS END=54858481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,868:0,61,255:26,0 chr2 54858482 . C . PASS END=54858485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 54858486 . T . PASS END=54858486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:25,0 chr2 54858487 . C . PASS END=54858496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 54858497 . G . PASS END=54858501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 54858502 . C . PASS END=54858502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 54858503 . A . PASS END=54858503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 54858504 . T . PASS END=54858520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:30,0 chr2 54858521 . A . PASS END=54858521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 54858522 . A . PASS END=54858538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:31,0 chr2 54858539 . C . PASS END=54858539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:29,0 chr2 54858540 . A . PASS END=54858566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1153:0,80,255:31,0 chr2 54858567 . T . PASS END=54858569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:26,0 chr2 54858570 . C . PASS END=54858570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 54858571 . C . PASS END=54858574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1125:0,69,255:26,0 chr2 54858575 . G . PASS END=54858579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,92,255:28,0 chr2 54858580 . G . PASS END=54858589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr2 54858590 . C . PASS END=54858604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1109:0,80,255:31,0 chr2 54858605 . C . PASS END=54858605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 54858606 . G . PASS END=54858625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1158:0,93,255:36,0 chr2 54858626 . G . PASS END=54858626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:33,0 chr2 54858627 . A . PASS END=54858651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1288:0,92,255:35,0 chr2 54858652 . G . PASS END=54858652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:32,0 chr2 54858653 . A . PASS END=54858690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1136:0,85,255:35,0 chr2 54858691 . T . PASS END=54858711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,75,255:26,0 chr2 54858712 . A . PASS END=54858712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr2 54858713 . G . PASS END=54858715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr2 54858716 . A . PASS END=54858716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:22,0 chr2 54858717 . C . PASS END=54858728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr2 54858729 . A . PASS END=54858729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:18,0 chr2 54858730 . A . PASS END=54858730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 54858731 . G . PASS END=54858733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 54858734 . T . PASS END=54858734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:18,0 chr2 54858735 . T . PASS END=54858748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:19:0,46,625:0,46,255:19,0 chr2 54859703 . G . PASS END=54859894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1141:0,83,255:40,0 chr2 54859895 . A . PASS END=54859905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:27:0,69,1035:0,73,255:26,0 chr2 54864850 . A . PASS END=54864940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:51:0,120,1800:0,136,255:40,0 chr2 54870120 . C . PASS END=54870124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr2 54870125 . T . PASS END=54870156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1023:0,80,255:40,0 chr2 54870157 . A . PASS END=54870157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1327:0,65,255:37,0 chr2 54870158 . G . PASS END=54870264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1172:0,83,255:40,0 chr2 54870265 . A . PASS END=54870265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr2 54870266 . G . PASS END=54870266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 54871460 . G . PASS END=54871468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,922:0,62,255:26,0 chr2 54871469 . C . PASS END=54871499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1078:0,80,255:32,0 chr2 54871500 . C . PASS END=54871500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:30,0 chr2 54871501 . T . PASS END=54871727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1072:0,83,255:40,0 chr2 54872294 . C . PASS END=54872295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 54872366 . A . PASS END=54872374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 54872375 . A . PASS END=54872375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr2 54872376 . A . PASS END=54872401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:30,0 chr2 54872402 . A . PASS END=54872402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,86,255:26,0 chr2 54872403 . T . PASS END=54872408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 54872409 . A . PASS END=54872409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:26,0 chr2 54872410 . G . PASS END=54872418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,967:0,87,255:30,0 chr2 54872419 . C . PASS END=54872430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,77,255:26,0 chr2 54872431 . C . PASS END=54872436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 54872437 . T . PASS END=54872437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 54872438 . C . PASS END=54872444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 54872445 . G . PASS END=54872445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 54872446 . G . PASS END=54872559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1099:0,83,255:40,0 chr2 54872560 . T . PASS END=54872576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,65,255:26,0 chr2 54872577 . T . PASS END=54872587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 54872588 . A . PASS END=54872588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:19,0 chr2 54872589 . T . PASS END=54872589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 54872590 . C . PASS END=54872590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 54873065 . T . PASS END=54873151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:38:0,98,1333:0,98,255:40,0 chr2 54873152 . C . PASS END=54873152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:32,0 chr2 54873153 . A . PASS END=54873154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr2 54873331 . A . PASS END=54873336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:25:0,75,961:0,75,255:25,0 chr2 54873337 . C . PASS END=54873337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 54873338 . A . PASS END=54873350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 54873351 . G . PASS END=54873351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 54873352 . G . PASS END=54873419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,886:0,64,255:26,0 chr2 54873420 . C . PASS END=54873433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,675:0,48,255:18,0 chr2 54873434 . T . PASS END=54873475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:13,0 chr2 54873476 . T . PASS END=54873486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr2 54873487 . A . PASS END=54873487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 54873488 . C . PASS END=54873489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 54873490 . G . PASS END=54873500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 54873501 . C . PASS END=54873513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 54873514 . G . PASS END=54873517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 54873518 . C . LowGQ END=54873518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:9,0 chr2 54873519 . G . PASS END=54873520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 54873521 . A . PASS END=54873521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:7,0 chr2 54873522 . C . PASS END=54873546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,311:0,27,255:9,0 chr2 54873547 . G . PASS END=54873547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr2 54873548 . C . PASS END=54873554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 54873555 . G . PASS END=54873555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 54873556 . G . PASS END=54873560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 54873561 . A . PASS END=54873561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 54873562 . G . PASS END=54873574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,288:0,27,255:9,0 chr2 54873575 . A . PASS END=54873575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 54873576 . G . PASS END=54873576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 54873577 . C . PASS END=54873577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 54873578 . A . PASS END=54873579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 54873580 . G . PASS END=54873580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 54873581 . A . PASS END=54873585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 54873586 . T . PASS END=54873586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 54873587 . A . PASS END=54873588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 54873589 . A . PASS END=54873589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 54873590 . T . PASS END=54873594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr2 54873595 . T . PASS END=54873595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr2 54873596 . C . PASS END=54873604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 54873605 . A . PASS END=54873607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 54873608 . C . PASS END=54873608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 54873609 . C . PASS END=54873609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 54873610 . A . PASS END=54873610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr2 54873611 . A . PASS END=54873612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 54874268 . G . PASS END=54874268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 54874269 . A . PASS END=54874270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 54874271 . G . PASS END=54874276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 54874277 . A . PASS END=54874277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 54874278 . G . PASS END=54874282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,976:0,78,255:26,0 chr2 54874283 . G . PASS END=54874284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 54874285 . C . PASS END=54874285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 54874286 . T . PASS END=54874287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr2 54874288 . C . PASS END=54874288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 54874289 . A . PASS END=54874312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,983:0,84,255:32,0 chr2 54874313 . G . PASS END=54874313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:31,0 chr2 54874314 . A . PASS END=54874376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:34,0 chr2 54874377 . T . PASS END=54874386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 54874387 . C . PASS END=54874388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 54874389 . A . PASS END=54874398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr2 54876123 . T . PASS END=54876128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:18,0 chr2 54876129 . C . PASS END=54876129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 54876130 . A . PASS END=54876130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 54876131 . T . PASS END=54876132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 54876133 . A . PASS END=54876133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:21,0 chr2 54876134 . G . PASS END=54876142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,897:0,78,255:26,0 chr2 54876143 . A . PASS END=54876149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr2 54876150 . A . PASS END=54876150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr2 54876151 . G . PASS END=54876327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:32:0,80,1117:0,80,255:40,0 chr2 54876709 . T . PASS END=54876714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:57:0,90,1659:0,90,255:40,0 chr2 54876752 . A . PASS END=54877126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:36:0,84,1260:0,84,255:40,0 chr2 54880746 . G . PASS END=54880784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,582:0,45,255:18,0 chr2 54880785 . G . PASS END=54880791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 54880792 . C . PASS END=54880793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 54880794 . G . PASS END=54880860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:25,0 chr2 54880861 . A . PASS END=54880861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr2 54880862 . C . PASS END=54880865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 54880866 . T . PASS END=54880867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 54880868 . T . PASS END=54880896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 54880897 . C . PASS END=54880897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 54880898 . A . PASS END=54880898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr2 54880899 . G . PASS END=54880936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,839:0,69,255:24,0 chr2 54880937 . C . PASS END=54880963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,706:0,54,255:19,0 chr2 54880964 . G . PASS END=54880965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 54880966 . A . PASS END=54880990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,675:0,43,255:19,0 chr2 54882207 . G . PASS END=54882207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:28,0 chr2 54882208 . G . PASS END=54882345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:31:0,87,1150:0,88,255:40,0 chr2 54883051 . A . PASS END=54883135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:43:0,96,1440:0,104,255:40,0 chr2 54884987 . T . PASS END=54885005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:26,0 chr2 54885006 . C . PASS END=54885006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 54885007 . T . PASS END=54885009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 54885010 . A . PASS END=54885019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 54885020 . G . PASS END=54885020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 54885021 . T . PASS END=54885041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:32:0,92,1174:0,92,255:36,0 chr2 54885042 . T . PASS END=54885042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr2 54885043 . G . PASS END=54885077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1325:0,81,255:38,0 chr2 54885078 . C . PASS END=54885078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1371:0,70,255:35,0 chr2 54885079 . C . PASS END=54885154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1305:0,87,255:38,0 chr2 54885155 . G . PASS END=54885155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,901:0,24,255:26,0 chr2 54885156 . G . PASS END=54885158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,863:0,60,255:29,0 chr2 54885159 . C . PASS END=54885160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 54885161 . C . PASS END=54885175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr2 54885176 . T . PASS END=54885176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:23,0 chr2 54885177 . G . PASS END=54885183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:25,0 chr2 54886291 . T . PASS END=54886291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,934:0,84,255:28,0 chr2 54886292 . T . PASS END=54886292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 54886293 . G . PASS END=54886325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1086:0,84,255:40,0 chr2 54886326 . A . PASS END=54886326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1418:0,76,255:38,0 chr2 54886327 . G . PASS END=54886403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1378:0,94,255:40,0 chr2 54887073 . G . PASS END=54887201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1201:0,97,255:40,0 chr2 54887202 . C . PASS END=54887207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1035:0,99,255:26,0 chr2 54887208 . A . PASS END=54887216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:27:0,45,675:0,71,255:18,0 chr2 54887217 . A . PASS END=54887220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:18:0,36,540:0,54,255:12,0 chr2 54887221 . T . PASS END=54887221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:12,0 chr2 54887222 . G . PASS END=54887223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:12,0 chr2 54891590 . A . PASS END=54891809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1190:0,81,255:40,0 chr2 54891810 . A . PASS END=54891828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,64,255:26,0 chr2 54893052 . G . PASS END=54893223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1134:0,81,255:40,0 chr2 54893224 . A . PASS END=54893224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:26,0 chr2 54893225 . G . PASS END=54893225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 54894741 . A . PASS END=54894783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:93:0,120,1800:0,255,255:40,0 chr2 54895488 . G . PASS END=54895500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:26,0 chr2 54895501 . C . PASS END=54895510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 54895511 . G . PASS END=54895511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 54895512 . G . PASS END=54895514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 54895515 . A . PASS END=54895515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 54895516 . T . PASS END=54895517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 54895518 . T . PASS END=54895518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 54895519 . C . PASS END=54895525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 54895526 . C . PASS END=54895526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 54895527 . A . PASS END=54895532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 54895533 . T . PASS END=54895533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:28,0 chr2 54895534 . C . PASS END=54895548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 54895549 . T . PASS END=54895549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 54895550 . G . PASS END=54895550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 54895551 . T . PASS END=54895551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:27,0 chr2 54895552 . C . PASS END=54895584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1157:0,82,255:32,0 chr2 54895585 . G . PASS END=54895587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:26,0 chr2 54895588 . C . PASS END=54895605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1147:0,80,255:28,0 chr2 54895606 . G . PASS END=54895606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 54895607 . C . PASS END=54895628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 54895629 . T . PASS END=54895633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 54895634 . T . PASS END=54895634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,982:0,54,255:22,0 chr2 54895635 . C . PASS END=54895650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 54895651 . A . PASS END=54895651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 54895652 . G . PASS END=54895655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,930:0,72,255:24,0 chr2 54895656 . A . PASS END=54895656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr2 54895657 . A . PASS END=54895657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 54895658 . A . PASS END=54895660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,803:0,42,255:24,0 chr2 54895661 . G . PASS END=54895662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 54895663 . A . PASS END=54895696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,660:0,54,255:19,0 chr2 54895697 . A . PASS END=54895697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 54895698 . A . PASS END=54895706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:17,0 chr2 54952199 . A . PASS END=54952199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 54952200 . T . PASS END=54952207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 54952208 . C . PASS END=54952208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 54952209 . G . PASS END=54952219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,360:0,33,255:13,0 chr2 54952220 . C . PASS END=54952220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 54952221 . G . PASS END=54952237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 54952238 . G . PASS END=54952268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:14:0,41,468:0,41,255:19,0 chr2 54952269 . G . PASS END=54952269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr2 54952270 . C . PASS END=54952281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr2 54952282 . G . PASS END=54952282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 54952283 . T . PASS END=54952283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:21,0 chr2 54952284 . A . PASS END=54952291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr2 54952292 . G . PASS END=54952292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:22,0 chr2 54952293 . C . PASS END=54952299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:24,0 chr2 54952300 . G . PASS END=54952301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 54952302 . A . PASS END=54952309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 54952310 . T . PASS END=54952310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:20,0 chr2 54952311 . A . PASS END=54952311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 54952312 . C . PASS END=54952312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr2 54952313 . T . PASS END=54952313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 54952314 . T . PASS END=54952319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,836:0,53,255:20,0 chr2 54952320 . C . PASS END=54952320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:18,0 chr2 54952321 . T . PASS END=54952330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr2 54952331 . G . PASS END=54952331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 54952332 . T . PASS END=54952373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,405:0,36,255:13,0 chr2 54952374 . G . PASS END=54952374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 54952375 . A . PASS END=54952383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr2 54952384 . C . PASS END=54952387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 54952388 . A . PASS END=54952388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 54952389 . T . PASS END=54952395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr2 55040369 . C . PASS END=55040388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1447:0,90,255:40,0 chr2 55040389 . A . PASS END=55040425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1436:0,90,255:40,0 chr2 55040426 . A G, 179.42 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,23,0:0,21,0:129:217,132,0,1687,132,1687:255,132,0:0,0:1.7942e+02,1.2942e+02,0.0000e+00,4.5000e+02,1.6419e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,22:0,0,31,13 chr2 55040427 . T . PASS END=55040463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:44:0,120,1800:0,124,255:40,0 chr2 55040464 . T . PASS END=55040523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1115:0,80,255:40,0 chr2 55040524 . G . PASS END=55040524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 55040525 . A . PASS END=55040525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 55040526 . C . PASS END=55040528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:25,0 chr2 55043924 . C . PASS END=55043925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1364:0,108,255:37,0 chr2 55043926 . T . PASS END=55043926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1173:0,78,255:35,0 chr2 55043927 . T . PASS END=55044022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:37:0,95,1325:0,95,255:40,0 chr2 55047531 . A . PASS END=55047599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,99,1485:0,130,255:40,0 chr2 55054703 . T . PASS END=55054888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:40:0,87,1305:0,112,255:40,0 chr2 55056479 . G . PASS END=55056479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 55056480 . C . PASS END=55056481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr2 55056482 . G . PASS END=55056482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 55056483 . G . PASS END=55056483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 55056484 . A . PASS END=55056600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1052:0,80,255:40,0 chr2 55056601 . A . PASS END=55056614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,74,255:27,0 chr2 55071184 . G . PASS END=55071192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1058:0,82,255:40,0 chr2 55071193 . T . PASS END=55071193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1349:0,65,255:38,0 chr2 55071194 . C . PASS END=55071314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1305:0,84,255:40,0 chr2 55071315 . G . PASS END=55071335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr2 55071336 . C . PASS END=55071359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr2 55071360 . A . PASS END=55071360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:15,0 chr2 55071361 . C . PASS END=55071368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 55071369 . G . PASS END=55071385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr2 55074623 . G . PASS END=55074754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1158:0,90,255:40,0 chr2 55074755 . A . PASS END=55074760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:26,0 chr2 55077099 . A . PASS END=55077103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,917:0,75,255:26,0 chr2 55077104 . T . PASS END=55077126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1041:0,84,255:35,0 chr2 55077127 . G . PASS END=55077127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr2 55077128 . A . PASS END=55077350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1215:0,92,255:40,0 chr2 55077351 . G . PASS END=55077355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1035:0,77,255:24,0 chr2 55080780 . C . PASS END=55080781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 55080782 . G . PASS END=55080782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 55080783 . G . PASS END=55080783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 55080784 . G . PASS END=55080786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 55080787 . G . PASS END=55080787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 55080788 . C . PASS END=55080814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:23:0,64,823:0,64,255:26,0 chr2 55080815 . G . PASS END=55080992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1178:0,83,255:40,0 chr2 55086671 . G . PASS END=55086687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,927:0,81,255:30,0 chr2 55086688 . T . PASS END=55086688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 55086689 . A . PASS END=55086803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1141:0,91,255:40,0 chr2 55086804 . T . PASS END=55086824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr2 55086825 . A . PASS END=55086838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 55090920 . A . PASS END=55091026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,115,1800:0,115,255:40,0 chr2 55093903 . G . PASS END=55094006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:37:0,84,1260:0,102,255:40,0 chr2 55094007 . C . PASS END=55094021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,81,255:26,0 chr2 55096318 . T . PASS END=55096321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 55096322 . A . PASS END=55096322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 55096323 . G . PASS END=55096324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,738:0,63,255:21,0 chr2 55096325 . G . PASS END=55096327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 55096328 . T . PASS END=55096329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 55096330 . C . PASS END=55096335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 55096336 . T . PASS END=55096336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 55096337 . A . PASS END=55096349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:86:29:0,86,1041:0,86,255:33,0 chr2 55096350 . T . PASS END=55096350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1078:0,52,255:30,0 chr2 55096351 . C . PASS END=55096480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1230:0,81,255:40,0 chr2 55096481 . A . PASS END=55096481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:30,0 chr2 55096482 . A . PASS END=55096486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1260:0,81,255:30,0 chr2 55096487 . T . PASS END=55096494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:32:0,78,1170:0,79,255:26,0 chr2 55096495 . T . PASS END=55096495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:26,0 chr2 55096496 . A . PASS END=55096502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,74,255:26,0 chr2 55096503 . A . PASS END=55096504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,64,255:19,0 chr2 55098637 . G . PASS END=55098742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,101,1800:0,101,255:40,0 chr2 55106684 . C . PASS END=55106777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,150,255:40,0 chr2 55118191 . A . PASS END=55118275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:40:0,113,1596:0,113,255:40,0 chr2 55118276 . T . PASS END=55118291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,188,255:40,0 chr2 55119591 . G . PASS END=55119790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:38:0,84,1260:0,103,255:40,2 chr2 55119791 . A . PASS END=55119793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:38:0,69,1035:0,98,255:23,0 chr2 55122052 . G . PASS END=55122163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:96:40:0,96,1496:0,96,255:40,0 chr2 55122410 . G . PASS END=55122537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,116,1800:0,116,255:40,0 chr2 55126778 . G . PASS END=55126793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:32,0 chr2 55126794 . A . PASS END=55126794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1021:0,79,255:30,0 chr2 55126795 . A . PASS END=55126902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:31:0,83,1260:0,83,255:40,0 chr2 55126903 . A . PASS END=55126903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 55126904 . C . PASS END=55126914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr2 55126915 . A . PASS END=55126916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 55126917 . A . PASS END=55126917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 55126918 . A . PASS END=55126919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr2 55127834 . T . PASS END=55127838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1257:0,99,255:34,0 chr2 55127839 . C . PASS END=55127839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:32,0 chr2 55127840 . C . PASS END=55127964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:35:0,92,1302:0,92,255:40,0 chr2 55129078 . G . PASS END=55129115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:37:0,98,1349:0,98,255:38,0 chr2 55129558 . A . PASS END=55129566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 55129567 . C . PASS END=55129589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:9,0 chr2 55129590 . G . PASS END=55129631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr2 55129632 . G . PASS END=55129641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 55130181 . G . PASS END=55130332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:33:0,89,1148:0,89,255:40,0 chr2 55130333 . G . PASS END=55130333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr2 55130508 . A . PASS END=55130639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:81:35:0,81,1215:0,92,255:40,0 chr2 55138091 . G . PASS END=55138179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,117,1787:0,117,255:40,0 chr2 55143896 . A . PASS END=55143907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr2 55143908 . G . PASS END=55143914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr2 55143915 . A . PASS END=55143915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 55143916 . C . PASS END=55143916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 55143917 . A . PASS END=55143921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 55143922 . G . PASS END=55143936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:26,0 chr2 55143937 . G . PASS END=55144048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:28:0,84,1047:0,84,255:40,0 chr2 55144049 . A . PASS END=55144049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1207:0,77,255:30,0 chr2 55144050 . A . PASS END=55144053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:35:0,90,1350:0,92,255:31,0 chr2 55144054 . T . PASS END=55144064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,83,255:26,0 chr2 55144065 . C . PASS END=55144066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 55144067 . G . PASS END=55144067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:25,0 chr2 55144068 . T . PASS END=55144068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 55144069 . C . PASS END=55144071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:24,0 chr2 55144072 . G . PASS END=55144072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,855:0,74,255:18,0 chr2 55155450 . G . PASS END=55155634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:34:0,85,1180:0,85,255:40,0 chr2 55155635 . C . PASS END=55155651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:39:0,96,1426:0,101,255:36,0 chr2 55155762 . G . PASS END=55155888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:38:0,90,1341:0,90,255:40,0 chr2 55173797 . G . PASS END=55173815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,167,255:40,0 chr2 55175143 . G . PASS END=55175151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,1:115:99:112:0,120,1800:0,255,255:40,0 chr2 55176019 . A . PASS END=55176074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,122,255:40,0 chr2 55176075 . C . PASS END=55176075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 55176076 . C . PASS END=55176076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:23:52:0,23,1637:0,23,255:40,6 chr2 55176077 . A . PASS END=55176077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:12:53:0,12,1730:0,12,255:40,2 chr2 55176078 . A . PASS END=55176097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,117,1757:0,117,255:40,0 chr2 55177787 . G . PASS END=55177791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 55177792 . G . PASS END=55177792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 55177793 . G . PASS END=55177794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1241:0,86,255:33,0 chr2 55177795 . T . PASS END=55177795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1012:0,46,255:32,0 chr2 55177796 . C . PASS END=55177870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1127:0,85,255:34,0 chr2 55177871 . A . PASS END=55177888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:61:25:0,61,892:0,61,255:26,0 chr2 55177889 . G . PASS END=55177889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 55177890 . C . PASS END=55177895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 55177896 . T . PASS END=55177896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 55177897 . C . PASS END=55177898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 55177899 . T . PASS END=55177906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr2 55177907 . C . PASS END=55177907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 55177908 . T . PASS END=55177909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:14,0 chr2 55177910 . T . PASS END=55177910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 55177911 . C . PASS END=55177913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 55177914 . C . PASS END=55177916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr2 55179731 . G . PASS END=55179826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1009:0,84,255:35,0 chr2 55179827 . T . PASS END=55179829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,80,255:25,0 chr2 55180433 . G . PASS END=55180433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 55180434 . T . PASS END=55180453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 55181120 . G . PASS END=55181125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1255:0,89,255:35,0 chr2 55181126 . C . PASS END=55181126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:34,0 chr2 55181127 . A . PASS END=55181133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1263:0,89,255:35,0 chr2 55181134 . A . PASS END=55181134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:35,0 chr2 55181135 . T . PASS END=55181136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 55181137 . C . PASS END=55181137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1218:0,61,255:34,0 chr2 55181138 . A . PASS END=55181138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1311:0,95,255:35,0 chr2 55181139 . C . PASS END=55181139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr2 55181140 . A . PASS END=55181293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1209:0,81,255:40,0 chr2 55184927 . G . PASS END=55184938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,629:0,54,255:19,0 chr2 55184939 . C . PASS END=55184978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:26,0 chr2 55184979 . A . PASS END=55185003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,926:0,81,255:31,0 chr2 55185004 . T . PASS END=55185004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,923:0,79,255:29,0 chr2 55185005 . T . PASS END=55185083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:32,0 chr2 55185084 . G . PASS END=55185086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 55185087 . C . PASS END=55185094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 55185095 . C . PASS END=55185119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr2 55185120 . C . PASS END=55185135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:17:0,48,720:0,51,255:18,0 chr2 55186241 . A . PASS END=55186258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,629:0,54,255:19,0 chr2 55186259 . G . PASS END=55186263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 55186264 . C . PASS END=55186264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 55186265 . A . PASS END=55186266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 55186267 . C . PASS END=55186269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 55186270 . T . PASS END=55186270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 55186271 . G . PASS END=55186275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 55186276 . T . PASS END=55186276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 55186277 . G . PASS END=55186283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr2 55186284 . T . PASS END=55186298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr2 55186299 . T . PASS END=55186299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 55186300 . C . PASS END=55186318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1076:0,87,255:31,0 chr2 55186319 . A . PASS END=55186320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 55186321 . G . PASS END=55186345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr2 55186346 . A . PASS END=55186348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 55186349 . T . PASS END=55186353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 55186354 . A . PASS END=55186356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1002:0,70,255:26,0 chr2 55186357 . C . PASS END=55186357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr2 55186358 . C . PASS END=55186370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,892:0,61,255:26,0 chr2 55186371 . T . PASS END=55186382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:20:0,48,720:0,60,255:19,0 chr2 55186383 . G . PASS END=55186383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:15,0 chr2 55186384 . C . PASS END=55186393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,623:0,41,255:18,0 chr2 55186394 . A C, 101.17 PASS DP=19;MQ=250.00;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,9,0:0,9,0:51:139,54,0,690,54,690:255,57,0:0,0:1.0117e+02,5.1172e+01,3.3134e-05,4.5000e+02,8.5942e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,10:0,0,9,9 chr2 55186395 . G . PASS END=55186398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr2 55187356 . G . PASS END=55187366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:26,0 chr2 55187367 . G . PASS END=55187395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1003:0,80,255:32,0 chr2 55187396 . A . PASS END=55187396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:32,0 chr2 55187397 . T . PASS END=55187399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1201:0,99,255:33,0 chr2 55187400 . A . PASS END=55187400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:30,0 chr2 55187401 . G . PASS END=55187437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:32,0 chr2 55187438 . G . PASS END=55187438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:25,0 chr2 55187439 . T . PASS END=55187439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 55187440 . G . PASS END=55187469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,808:0,62,255:25,0 chr2 55187470 . A . PASS END=55187470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 55189659 . G . PASS END=55189661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 55189662 . A . PASS END=55189662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 55189663 . A . PASS END=55189776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:40,0 chr2 55189777 . A . PASS END=55189777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:29,0 chr2 55189778 . C . PASS END=55189789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,83,255:29,0 chr2 55189790 . C . PASS END=55189811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,826:0,64,255:26,0 chr2 55189812 . G . PASS END=55189812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:21,0 chr2 55189813 . A . PASS END=55189829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,71,255:24,0 chr2 55189830 . T . PASS END=55189847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr2 55191122 . A . PASS END=55191124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr2 55191125 . C . PASS END=55191130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 55191131 . A . PASS END=55191131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 55191132 . A . PASS END=55191134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 55191135 . A . PASS END=55191135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 55191136 . G . PASS END=55191147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,778:0,66,255:25,0 chr2 55191148 . C . PASS END=55191149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 55191150 . A . PASS END=55191158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 55191159 . G . PASS END=55191159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr2 55191160 . G . PASS END=55191162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 55191163 . T . PASS END=55191172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1055:0,84,255:32,0 chr2 55191173 . A . PASS END=55191173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 55191174 . G . PASS END=55191188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1068:0,88,255:34,0 chr2 55191189 . T . PASS END=55191189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:34,0 chr2 55191190 . G . PASS END=55191217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:97:35:0,97,1272:0,97,255:38,0 chr2 55191218 . T . PASS END=55191218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:63:38:0,63,978:0,63,255:33,0 chr2 55191219 . T . PASS END=55191278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1103:0,83,255:36,0 chr2 55191279 . C . PASS END=55191288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:24,0 chr2 55191289 . T . PASS END=55191294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:51:25:0,51,765:0,64,255:19,0 chr2 55191707 . A . PASS END=55191869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:37:0,95,1339:0,95,255:40,0 chr2 55193859 . A . PASS END=55193861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 55193862 . C . PASS END=55193862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr2 55193863 . A . PASS END=55193880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,878:0,62,255:26,0 chr2 55193881 . G . PASS END=55193892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr2 55193893 . A . PASS END=55193893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr2 55193894 . G . PASS END=55193894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 55193895 . A . PASS END=55193895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 55193896 . G . PASS END=55193909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:38,0 chr2 55193910 . G . PASS END=55193910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr2 55193911 . G . PASS END=55193929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1343:0,97,255:39,0 chr2 55193930 . A . PASS END=55193930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:36,0 chr2 55193931 . A . PASS END=55193963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1074:0,94,255:38,0 chr2 55193964 . G . PASS END=55193964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,1001:0,44,255:30,0 chr2 55193965 . C . PASS END=55193981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:37:0,96,1321:0,97,255:37,0 chr2 55193982 . T . PASS END=55193990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,95,255:25,1 chr2 55194136 . G . PASS END=55194169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,808:0,66,255:26,0 chr2 55194170 . A . PASS END=55194230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1139:0,80,255:32,0 chr2 55194231 . C . PASS END=55194239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:28:0,68,1000:0,68,255:24,0 chr2 55195264 . C . PASS END=55195278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,901:0,62,255:26,0 chr2 55195279 . A . PASS END=55195283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 55195284 . T . PASS END=55195284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 55195285 . T . PASS END=55195375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1065:0,82,255:40,0 chr2 55195376 . G . PASS END=55195386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:26,0 chr2 55195387 . G . PASS END=55195391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,964:0,84,255:28,0 chr2 55195392 . T . PASS END=55195392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,903:0,45,255:27,0 chr2 55195393 . T . PASS END=55195393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 55195394 . G . PASS END=55195395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 55195396 . T . PASS END=55195396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:27,0 chr2 55195397 . T . PASS END=55195402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 55195403 . T . PASS END=55195410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:26,0 chr2 55195411 . A . PASS END=55195411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr2 55195412 . A . PASS END=55195417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 55195804 . G . PASS END=55195904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,99,1485:0,132,255:40,0 chr2 55197207 . T . PASS END=55197231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,179,255:40,0 chr2 55200292 . T . PASS END=55200334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,171,255:40,0 chr2 55200695 . T . PASS END=55200757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,3:92:99:83:0,120,1800:0,190,255:40,2 chr2 55200957 . C . PASS END=55201000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,197,255:40,0 chr2 55201001 . G . PASS END=55201003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 55201831 . C . PASS END=55201900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,105,1575:0,108,255:40,0 chr2 55209651 . C . PASS END=55209759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:83:34:0,83,1156:0,83,255:40,0 chr2 55209760 . G . PASS END=55209760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:30,0 chr2 55209761 . A . PASS END=55209777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:31,0 chr2 55209778 . T . PASS END=55209789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,73,255:23,0 chr2 55214627 . C . PASS END=55214655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:33:0,86,1225:0,86,255:35,0 chr2 55214656 . G . PASS END=55214809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:35:0,88,1219:0,88,255:40,1 chr2 55214810 . T . PASS END=55214816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:35:0,60,900:0,78,255:26,0 chr2 55214817 . A . PASS END=55214834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,621:0,51,255:18,0 chr2 55237223 . C . PASS END=55237256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,245,255:40,0 chr2 55252222 . C . PASS END=55252222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr2 55252223 . T . PASS END=55252223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 55252224 . G . PASS END=55252225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,800:0,55,255:24,0 chr2 55252226 . A . PASS END=55252232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,828:0,64,255:26,0 chr2 55252233 . C . PASS END=55252234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 55252235 . C . PASS END=55252235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 55252236 . A . PASS END=55252237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 55252238 . C . PASS END=55252238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr2 55252239 . T . PASS END=55252248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1019:0,80,255:32,0 chr2 55252249 . A . PASS END=55252249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:32,0 chr2 55252250 . T . PASS END=55252253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:34,0 chr2 55252254 . G . PASS END=55252254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr2 55252255 . C . PASS END=55252257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 55252258 . A . PASS END=55252258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:32,0 chr2 55252259 . T . PASS END=55252336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:34:0,80,1147:0,80,255:36,0 chr2 55252337 . G . PASS END=55252337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 55252338 . C . PASS END=55252401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,91,255:40,0 chr2 55252402 . T . PASS END=55252402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:36,0 chr2 55252403 . A . PASS END=55252473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1123:0,80,255:39,0 chr2 55252474 . A . PASS END=55252474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 55252475 . A . PASS END=55253404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:31:0,80,1125:0,80,255:40,1 chr2 55253405 . A . PASS END=55253405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:31,0 chr2 55253406 . A . PASS END=55253524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1220:0,81,255:40,1 chr2 55253525 . C . PASS END=55253525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:72:52:0,72,1386:0,72,255:40,0 chr2 55253526 . T . PASS END=55253528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:99:52:0,120,1800:0,122,255:40,0 chr2 55253529 . G . PASS END=55253529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,6:52:56:52:0,56,1442:0,56,255:40,0 chr2 55253530 . T . PASS END=55253550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:52:0,112,1748:0,112,255:40,0 chr2 55253551 . C . PASS END=55253551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:79:54:0,79,1629:0,79,255:40,0 chr2 55253552 . A . PASS END=55253553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:53:0,120,1800:0,129,255:40,0 chr2 55253554 . T . PASS END=55253554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,7:54:46:54:0,46,1571:0,46,255:40,0 chr2 55253555 . T . PASS END=55253562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:53:0,120,1800:0,128,255:40,0 chr2 55253563 . C . PASS END=55253563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:77:55:0,77,1754:0,77,255:40,0 chr2 55253564 . T . PASS END=55254321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:40:0,80,1413:0,80,255:40,4 chr2 55254322 . T . PASS END=55254322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:79:53:0,79,1698:0,79,255:40,0 chr2 55254323 . G . PASS END=55254599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:35:0,81,1215:0,95,255:40,0 chr2 55254600 . T . PASS END=55254609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,84,255:26,0 chr2 55254610 . A . PASS END=55254615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,75,255:19,0 chr2 55254616 . T . PASS END=55254621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:22,0 chr2 55255300 . C . PASS END=55255356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:53:0,120,1800:0,155,255:40,0 chr2 55276694 . C . PASS END=55276704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 55276705 . G . LowGQ END=55276705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,455:21,0,255:12,0 chr2 55276706 . G . PASS END=55276706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 55276707 . G . PASS END=55276707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 55276708 . C . PASS END=55276708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr2 55276709 . C . PASS END=55276710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr2 55276711 . C . PASS END=55276711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 55276712 . C . PASS END=55276718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 55276719 . T . PASS END=55276720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:15,0 chr2 55276721 . C . PASS END=55276721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 55276722 . T . PASS END=55276723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 55276724 . C . PASS END=55276726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 55276727 . G . PASS END=55276727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 55276728 . C . PASS END=55276728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr2 55276729 . G . PASS END=55276729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 55276730 . C . PASS END=55276734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr2 55276735 . A . PASS END=55276735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 55276736 . A . PASS END=55276737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 55276738 . C . PASS END=55276738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 55276739 . A . PASS END=55276742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 55276743 . G . PASS END=55276743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:16,0 chr2 55276744 . G . PASS END=55276748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 55276749 . C . PASS END=55276749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 55276750 . C . PASS END=55276751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 55276752 . T . PASS END=55276752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 55276753 . C . PASS END=55276760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr2 55276761 . A . PASS END=55276761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 55276762 . G . PASS END=55276776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 55276881 . C . PASS END=55276887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 55276888 . G . PASS END=55276888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:19,0 chr2 55276889 . C . PASS END=55276892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 55276893 . A . PASS END=55276894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 55276895 . G . PASS END=55276896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 55276897 . G . PASS END=55276897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:20,0 chr2 55276898 . C . PASS END=55276901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 55276902 . T . PASS END=55276902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,690:0,32,255:20,0 chr2 55276903 . G . PASS END=55276903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 55276904 . C . PASS END=55276904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 55276905 . G . PASS END=55276905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:20,0 chr2 55276906 . C . PASS END=55276907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 55276908 . T . PASS END=55276917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 55276918 . C . PASS END=55276968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,665:0,41,255:19,0 chr2 55276969 . C . PASS END=55276969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:15,0 chr2 55276970 . T . PASS END=55276972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:40:19:0,40,607:0,40,255:18,0 chr2 55276973 . G . PASS END=55276973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 55276974 . C . PASS END=55276974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:20,0 chr2 55276975 . C . PASS END=55276985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 55276986 . C . PASS END=55276986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr2 55276987 . G . PASS END=55276987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 55276988 . C . PASS END=55277020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,585:0,43,255:19,0 chr2 55277021 . G . PASS END=55277026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 55277027 . T . PASS END=55277027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 55277028 . C . PASS END=55277028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr2 55277029 . G . PASS END=55277047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,585:0,54,255:18,0 chr2 55277048 . G . PASS END=55277048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 55277049 . G . PASS END=55277066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,481:0,53,255:18,0 chr2 55277067 . A . PASS END=55277067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,580:0,37,255:16,0 chr2 55277068 . C . PASS END=55277082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr2 55277083 . G . PASS END=55277083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 55277084 . G . PASS END=55277084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 55277085 . G . PASS END=55277085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 55277086 . C . PASS END=55277086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 55277087 . A . PASS END=55277087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 55277088 . C . PASS END=55277097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 55277098 . C . PASS END=55277101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,551:0,34,255:13,0 chr2 55277102 . G . PASS END=55277110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 55277111 . T . PASS END=55277133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:12:0,31,495:0,31,255:13,0 chr2 55277134 . G . PASS END=55277134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr2 55277135 . G . PASS END=55277136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 55277137 . G . PASS END=55277152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr2 55277153 . G . PASS END=55277153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 55277154 . G . PASS END=55277159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 55277160 . G . PASS END=55277160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 55277161 . T . PASS END=55277196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,599:0,51,255:19,0 chr2 55277197 . G . PASS END=55277197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 55277198 . T . PASS END=55277199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 55277200 . C . PASS END=55277229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,878:0,69,255:25,0 chr2 55277230 . G . PASS END=55277244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 55277245 . G . PASS END=55277245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr2 55277246 . G . PASS END=55277247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 55277248 . C . PASS END=55277248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 55277249 . A . PASS END=55277249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr2 55277250 . G . PASS END=55277250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 55277251 . C . PASS END=55277257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 55277258 . G . PASS END=55277264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 55277265 . T . PASS END=55277265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 55277266 . C . PASS END=55277326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,864:0,65,255:26,0 chr2 55277327 . T . PASS END=55277327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr2 55277328 . C . PASS END=55277329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,914:0,72,255:24,0 chr2 55277330 . T . PASS END=55277330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,782:0,25,255:19,0 chr2 55277331 . C . PASS END=55277335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 55277336 . T . PASS END=55277336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:18,0 chr2 55277337 . C . PASS END=55277337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 55277338 . G . PASS END=55277381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,599:0,40,255:19,0 chr2 55277382 . G . PASS END=55277382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:14,0 chr2 55277383 . C . PASS END=55277384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 55277385 . G . PASS END=55277385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 55277386 . G . PASS END=55277387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 55277388 . G . PASS END=55277391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:33:17:0,33,495:0,34,255:11,0 chr2 55277392 . G . PASS END=55277392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:11,0 chr2 55277393 . C . PASS END=55277394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:16:0,30,450:0,31,255:10,0 chr2 55277395 . G . PASS END=55277395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:9,0 chr2 55277396 . T . PASS END=55277396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:8,0 chr2 55277397 . C . PASS END=55277399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:10,0 chr2 55277400 . A . LowGQ END=55277400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:9,0 chr2 55277401 . G . PASS END=55277401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 55277402 . G . PASS END=55277402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 55277403 . A . PASS END=55277403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 55277404 . C . PASS END=55277407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 55277408 . A . PASS END=55277408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 55277409 . C . PASS END=55277413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 55277414 . G . PASS END=55277414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 55277415 . G . PASS END=55277417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 55277418 . A . PASS END=55277418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 55277419 . C . PASS END=55277422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 55277423 . T . PASS END=55277423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 55277424 . C . PASS END=55277425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 55277426 . A . LowGQ END=55277426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr2 55277427 . G . PASS END=55277428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 55277429 . T . PASS END=55277429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr2 55277430 . C . PASS END=55277435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 55277436 . T . PASS END=55277436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 55402926 . C . PASS END=55402926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1373:0,108,255:36,0 chr2 55402927 . T . PASS END=55402927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:35,0 chr2 55402928 . A . PASS END=55403122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:94:37:0,94,1296:0,94,255:40,0 chr2 55404738 . C . PASS END=55404756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,134,255:40,0 chr2 55404757 . T . PASS END=55404793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,144,255:40,0 chr2 55404794 . G A, 48.99 PASS DP=65;MQ=250.00;MQRankSum=6.882;ReadPosRankSum=3.860;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,29,0:0.446,0.000:65:14,16,0:22,13,0:48:84,0,50,1029,1280,2309:255,0,255:33,0:4.8990e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,20,19,10:20,16,22,7 chr2 55404795 . C . PASS END=55404831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:64:0,120,1800:0,167,255:40,0 chr2 55404832 . A . PASS END=55404887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,173,255:40,0 chr2 55404888 . G . PASS END=55404917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:45:0,120,1800:0,121,255:40,0 chr2 55407646 . C . PASS END=55407646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr2 55407647 . G . PASS END=55407658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,850:0,64,255:26,0 chr2 55407659 . C . PASS END=55407659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 55407660 . T . PASS END=55407664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 55407665 . C . PASS END=55407669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:31,0 chr2 55407670 . G . PASS END=55407670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:31,0 chr2 55407671 . T . PASS END=55407716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:35:0,84,1304:0,84,255:40,0 chr2 55407717 . A . PASS END=55407753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,135,255:40,0 chr2 55407754 . C T, 213.22 PASS DP=56;MQ=248.44;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,24,0:0,32,0:163:251,166,0,351,351,351:255,168,0:0,0:2.1322e+02,1.6322e+02,0.0000e+00,3.4799e+02,3.8276e+02,3.5100e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,34,22:0,0,24,32 chr2 55407755 . A . PASS END=55407791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,149,255:40,0 chr2 55407792 . G . PASS END=55407848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:34:0,81,1215:0,85,255:40,0 chr2 55408706 . C . PASS END=55408707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 55408708 . T . PASS END=55408839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:30:0,87,1133:0,90,255:40,0 chr2 55408840 . T . PASS END=55408840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:51:43:0,51,1434:0,51,255:38,0 chr2 55408841 . A . PASS END=55408857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:40:0,93,1395:0,96,255:40,0 chr2 55408858 . C . PASS END=55408858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:30,0 chr2 55408859 . T . PASS END=55408877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,89,255:34,0 chr2 55408878 . C . PASS END=55408880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:34:0,72,1080:0,102,255:24,0 chr2 55433406 . C . PASS END=55433512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,120,1800:0,131,255:40,0 chr2 55435762 . C . PASS END=55435846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:87:40:0,87,1365:0,87,255:40,0 chr2 55436540 . C . PASS END=55436652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:50:0,120,1800:0,123,255:40,0 chr2 55436766 . C . PASS END=55436896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,116,1800:0,116,255:40,0 chr2 55436897 . A . PASS END=55436933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,116,1800:0,116,255:40,1 chr2 55436934 . G A, 48.25 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=1.808;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:12,12,0:16,9,0:47:83,0,50,743,996,1739:255,0,255:22,0:4.8253e+01,8.6719e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,9,12:15,13,10,11 chr2 55436935 . C . PASS END=55436958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:41:0,90,1350:0,107,255:40,0 chr2 55436959 . G . PASS END=55436967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,105,255:24,0 chr2 55439809 . C . PASS END=55439925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,120,1800:0,122,255:40,0 chr2 55439926 . T . PASS END=55439942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr2 55444947 . T . PASS END=55445134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:96:41:0,96,1440:0,116,255:40,0 chr2 55449371 . C . PASS END=55449547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:36:0,108,1284:0,108,255:40,0 chr2 55459961 . A . PASS END=55459969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 55459970 . T . PASS END=55459970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr2 55459971 . T . PASS END=55459979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 55459980 . C . PASS END=55459980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:20,0 chr2 55459981 . C . PASS END=55459995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr2 55459996 . C . PASS END=55459996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 55459997 . A . PASS END=55460002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 55460003 . C . PASS END=55460008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 55460499 . G . PASS END=55460553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,146,255:40,0 chr2 55461255 . G . PASS END=55461331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,114,1407:0,120,255:40,0 chr2 55461332 . A . PASS END=55461368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,112,1756:0,112,255:40,0 chr2 55461369 . T . LowGQ END=55461370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:0:56:0,0,1660:7,0,255:40,5 chr2 55461371 . A . PASS END=55461371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:52:56:0,52,1914:0,52,255:40,0 chr2 55461372 . A . PASS END=55461376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 55461378 . A . PASS END=55461406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,127,255:40,1 chr2 55461407 . T . PASS END=55461437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,126,255:40,1 chr2 55461967 . G . PASS END=55461968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr2 55461969 . G . PASS END=55462057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1023:0,81,255:35,0 chr2 55462058 . A . PASS END=55462058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 55462059 . G . PASS END=55462059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 55462060 . A . PASS END=55462060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,978:0,43,255:27,0 chr2 55462061 . G . PASS END=55462061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 55462062 . A . PASS END=55462062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 55462063 . A . PASS END=55462070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 55462071 . T . PASS END=55462071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 55462072 . A . PASS END=55462073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 55462074 . G . PASS END=55462085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:26:0,70,986:0,70,255:26,0 chr2 55462086 . G . PASS END=55462086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr2 55462087 . A . PASS END=55462098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:25,0 chr2 55462564 . G . PASS END=55462640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,962:0,84,255:34,0 chr2 55462641 . A . PASS END=55462649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,71,255:26,0 chr2 55462650 . T . PASS END=55462650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,939:0,53,255:22,0 chr2 55462651 . G . PASS END=55462669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,923:0,62,255:26,0 chr2 55462670 . A . PASS END=55462670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 55462671 . A . PASS END=55462683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 55462684 . T . PASS END=55462684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 55462685 . A . PASS END=55462697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 55462698 . A . PASS END=55462698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr2 55462699 . C . PASS END=55462699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 55462700 . C . PASS END=55462700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 55462701 . A . PASS END=55462701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 55462702 . G . PASS END=55462713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 55463784 . T . PASS END=55463956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:50:0,120,1800:0,130,255:40,0 chr2 55464424 . C . PASS END=55464564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:44:0,87,1305:0,116,255:40,0 chr2 55467147 . C . PASS END=55467311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:44:0,108,1620:0,116,255:40,0 chr2 55470076 . C . PASS END=55470077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,150,255:40,0 chr2 55470078 . T . PASS END=55470114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:51:0,120,1800:0,122,255:40,0 chr2 55470115 . C T, 253.74 PASS DP=70;MQ=196.55;FractionInformativeReads=0.986 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,36,0:0,33,0:204:292,207,0,2596,207,2596:255,216,0:0,0:2.5374e+02,2.0374e+02,0.0000e+00,4.5000e+02,2.3851e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,42,27:0,0,33,36 chr2 55470116 . A . PASS END=55470152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:72:0,120,1800:0,153,255:40,0 chr2 55470153 . T . PASS END=55470216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,108,1620:0,110,255:40,0 chr2 55470552 . C . PASS END=55470560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1213:0,91,255:35,0 chr2 55470561 . T . PASS END=55470561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:32,0 chr2 55470562 . C . PASS END=55470804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:36:0,84,1260:0,96,255:40,0 chr2 55471165 . C . PASS END=55471369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,111,1559:0,112,255:40,0 chr2 55473473 . C . PASS END=55473597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:30:0,80,1080:0,80,255:40,0 chr2 55476531 . C . PASS END=55476646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:34:0,89,1249:0,89,255:40,0 chr2 55476647 . T . PASS END=55476647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1319:0,70,255:35,0 chr2 55476648 . A . PASS END=55476660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,95,255:37,0 chr2 55476661 . A . PASS END=55476667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,95,255:26,0 chr2 55476668 . G . PASS END=55476668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1019:0,51,255:25,0 chr2 55476669 . A . PASS END=55476669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 55476670 . A . PASS END=55476670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 55479613 . C . PASS END=55479739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1126:0,83,255:40,0 chr2 55479740 . A . PASS END=55479765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,695:0,63,255:23,0 chr2 55479766 . T . PASS END=55479766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,636:0,33,255:20,0 chr2 55479767 . C . PASS END=55479777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 55479778 . A . PASS END=55479789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:20:0,49,713:0,49,255:19,0 chr2 55481177 . C . PASS END=55481325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1170:0,83,255:40,0 chr2 55481326 . T . PASS END=55481332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,990:0,99,255:26,0 chr2 55481333 . G . PASS END=55481337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:32:0,54,810:0,80,255:19,0 chr2 55481790 . C . PASS END=55481961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:34:0,81,1215:0,102,255:40,0 chr2 55489452 . C . PASS END=55489563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,100,1577:0,100,255:40,0 chr2 55490776 . C . PASS END=55490776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr2 55490777 . T . PASS END=55490777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:2:22:0,2,553:0,2,255:19,0 chr2 55490778 . T . PASS END=55490778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr2 55490779 . T . PASS END=55490782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 55490783 . G . LowGQ END=55490783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,586:12,0,255:20,0 chr2 55490784 . T . PASS END=55490785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 55490786 . A . LowGQ END=55490786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,590:6,0,255:19,0 chr2 55490787 . C . PASS END=55490787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:21,0 chr2 55490788 . T . PASS END=55490789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 55490790 . G . PASS END=55490790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,709:0,35,255:21,0 chr2 55490791 . A . PASS END=55490791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr2 55490792 . A . PASS END=55490792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 55490793 . G . PASS END=55490793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,919:0,56,255:28,0 chr2 55490794 . C . PASS END=55490794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr2 55490795 . C . PASS END=55490795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr2 55490796 . T . PASS END=55490796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,906:0,40,255:27,0 chr2 55490797 . A . PASS END=55490797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 55490798 . T . PASS END=55490798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr2 55490799 . A . PASS END=55490799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 55490800 . C . PASS END=55490802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1054:0,63,255:30,0 chr2 55490803 . A . PASS END=55490803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1251:0,102,255:34,0 chr2 55490804 . G . PASS END=55490804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:33,0 chr2 55490805 . A . PASS END=55490809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1152:0,88,255:34,0 chr2 55490810 . G . PASS END=55490810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1105:0,50,255:33,0 chr2 55490811 . C . PASS END=55490818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1249:0,89,255:35,0 chr2 55490819 . G T, 154.42 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,17,0:0,19,0:104:192,107,0,1329,107,1329:255,111,0:0,0:1.5442e+02,1.0442e+02,0.0000e+00,4.5000e+02,1.3919e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,14:0,0,25,11 chr2 55490820 . T . PASS END=55490820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 55490821 . G . PASS END=55490821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:36,0 chr2 55490822 . A . PASS END=55490827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1291:0,97,255:38,0 chr2 55490828 . T . PASS END=55490829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1349:0,65,255:38,0 chr2 55490830 . T . PASS END=55490856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:39:0,81,1364:0,81,255:40,0 chr2 55490857 . A . PASS END=55490992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:40:0,81,1215:0,102,255:40,0 chr2 55490993 . A . PASS END=55490994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 55518847 . T . PASS END=55518911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,153,255:40,0 chr2 55522200 . T . PASS END=55522384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:46:0,120,1800:0,133,255:40,0 chr2 55522385 . T . PASS END=55522421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:97:55:0,97,1800:0,97,255:40,0 chr2 55522422 . A G, 224.10 PASS DP=59;MQ=248.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,28,0:0,31,0:174:262,177,0,2212,177,2212:255,183,0:0,0:2.2410e+02,1.7410e+02,0.0000e+00,4.5000e+02,2.0887e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,34:0,0,30,29 chr2 55522423 . A . PASS END=55522459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,128,255:40,0 chr2 55522460 . A . PASS END=55523192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:38:0,86,1322:0,86,255:40,0 chr2 55523394 . C . PASS END=55523568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1260:0,94,255:40,0 chr2 55523569 . C . PASS END=55523589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:24:0,60,900:0,65,255:26,0 chr2 55523590 . T . PASS END=55523610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,690:0,53,255:18,0 chr2 55523611 . T . PASS END=55523611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 55523612 . C . PASS END=55523624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr2 55523625 . G . PASS END=55523645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,32,255:13,0 chr2 55523646 . A . LowGQ END=55523646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr2 55523647 . T . PASS END=55523659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 55526964 . C . PASS END=55527055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1288:0,92,255:40,0 chr2 55527389 . A . PASS END=55527459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1278:0,89,255:40,0 chr2 55527460 . T . PASS END=55527460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:28,0 chr2 55527461 . T . PASS END=55527461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 55527462 . A . PASS END=55527462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:28,0 chr2 55527463 . A . PASS END=55527467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:31,0 chr2 55527468 . C . PASS END=55527468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr2 55527469 . T . PASS END=55527475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 55528093 . C . PASS END=55528132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,106,1753:0,106,255:40,0 chr2 55528342 . C . PASS END=55528413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:55:0,120,1800:0,139,255:40,0 chr2 55529008 . C . PASS END=55529180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:41:0,81,1215:0,89,255:40,0 chr2 55529181 . A . PASS END=55529183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:37:0,75,1125:0,82,255:25,0 chr2 55529184 . A . PASS END=55529185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr2 55529186 . G . PASS END=55529192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:28:0,60,900:0,71,255:26,0 chr2 55529193 . A . PASS END=55529208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr2 55530191 . T . PASS END=55530288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:70:0,120,1800:0,197,255:40,0 chr2 55535945 . T . PASS END=55535947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:23,0 chr2 55535948 . T . PASS END=55535948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:22,0 chr2 55535949 . G . PASS END=55535954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,925:0,78,255:26,0 chr2 55535955 . C . PASS END=55535959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 55535960 . T . PASS END=55535960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 55535961 . C . PASS END=55536159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:31:0,93,1157:0,93,255:40,0 chr2 55536298 . C . PASS END=55536390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:65:0,120,1800:0,150,255:40,0 chr2 55539570 . A . PASS END=55539715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,120,1800:0,153,255:40,0 chr2 55541218 . T . PASS END=55541252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr2 55541253 . A . PASS END=55541253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:18,0 chr2 55541254 . G . PASS END=55541259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr2 55543064 . C . PASS END=55543250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:45:0,106,1620:0,106,255:40,0 chr2 55544342 . C . PASS END=55544485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:72:0,120,1800:0,183,255:40,0 chr2 55544700 . C . PASS END=55544701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 55544702 . G . PASS END=55544714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,771:0,62,255:26,0 chr2 55544715 . C . PASS END=55544722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1024:0,81,255:31,0 chr2 55544723 . C . PASS END=55544723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 55544724 . A . PASS END=55544727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 55544728 . C . PASS END=55544728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 55544729 . A . PASS END=55544973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:31:0,80,1097:0,80,255:40,0 chr2 55544974 . C . PASS END=55544977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 55545979 . C . PASS END=55545981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 55545982 . A . PASS END=55545982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 55545983 . A . PASS END=55545985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 55545986 . T . PASS END=55545986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 55545987 . T . PASS END=55546140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:81:31:0,81,1133:0,81,255:40,0 chr2 55549664 . A . PASS END=55549795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:46:0,114,1656:0,114,255:40,0 chr2 55549796 . T . PASS END=55549796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1414:0,74,255:36,0 chr2 55549797 . C . PASS END=55549807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:42:0,82,1260:0,82,255:31,0 chr2 55549808 . A . PASS END=55549809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr2 55549810 . C . PASS END=55549810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 55549811 . T . PASS END=55549811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 55549812 . T . PASS END=55549817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 55549818 . T . PASS END=55549818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:29,0 chr2 55549819 . T . PASS END=55549819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 55549820 . T . PASS END=55549820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 55549821 . T . PASS END=55549821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 55549822 . T . PASS END=55549822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:29,0 chr2 55549823 . T . PASS END=55549827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 55549828 . C . PASS END=55549828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 55555430 . T . PASS END=55555571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:39:0,100,1366:0,100,255:40,0 chr2 55559702 . C . PASS END=55559829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:83:50:0,83,1776:0,83,255:40,0 chr2 55561230 . C . PASS END=55562256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:30:0,81,1139:0,90,255:40,0 chr2 55562257 . A . PASS END=55562274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,922:0,72,255:25,0 chr2 55562275 . T . PASS END=55562275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr2 55562276 . C . PASS END=55562290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 55562291 . G . PASS END=55562300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:53:20:0,53,806:0,53,255:18,0 chr2 55563817 . C . PASS END=55563954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:49:0,120,1800:0,124,255:40,0 chr2 55566600 . C . PASS END=55566758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,122,255:40,0 chr2 55566759 . C . PASS END=55566784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,102,1530:0,116,255:40,0 chr2 55570784 . C . PASS END=55570928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:39:0,93,1421:0,93,255:40,0 chr2 55571504 . C . PASS END=55571650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,117,1781:0,117,255:40,0 chr2 55573311 . C . PASS END=55573316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:32:0,85,990:0,85,255:37,0 chr2 55573317 . T . PASS END=55573317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:35,0 chr2 55573318 . C . PASS END=55573319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1307:0,111,255:37,0 chr2 55573320 . T . PASS END=55573320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1103:0,61,255:34,0 chr2 55573321 . G . PASS END=55573321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1133:0,39,255:34,0 chr2 55573322 . C . PASS END=55573322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1344:0,111,255:37,0 chr2 55573323 . C . PASS END=55573323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:35,0 chr2 55573324 . T . PASS END=55573346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:93:37:0,93,1275:0,93,255:40,0 chr2 55573347 . T . PASS END=55573347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:49:45:0,49,1370:0,49,255:40,0 chr2 55573348 . C . PASS END=55573444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:38:0,81,1215:0,91,255:40,0 chr2 55573445 . G . PASS END=55573455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:60:30:0,60,1080:0,60,255:26,0 chr2 55573456 . A . PASS END=55573456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:23,0 chr2 55573457 . G . PASS END=55573466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:70:28:0,70,956:0,70,255:26,0 chr2 55573467 . G . PASS END=55573468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 55573469 . T . PASS END=55573469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,914:0,73,255:26,0 chr2 55576654 . C . PASS END=55576735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:61:0,120,1800:0,183,255:40,0 chr2 55582715 . A . PASS END=55582717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr2 55582718 . T . PASS END=55582718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr2 55582719 . C . PASS END=55582721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,895:0,78,255:26,0 chr2 55582722 . G . PASS END=55582725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1074:0,90,255:30,0 chr2 55582726 . A . PASS END=55582726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 55582727 . A . PASS END=55582730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1074:0,90,255:32,0 chr2 55582731 . T . PASS END=55582731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 55582732 . T . PASS END=55582733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr2 55582734 . T . PASS END=55582734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 55582735 . T . PASS END=55582735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1134:0,96,255:32,0 chr2 55582736 . A . PASS END=55582736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1067:0,27,255:30,0 chr2 55582737 . T . PASS END=55582753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1174:0,83,255:34,0 chr2 55582754 . G . PASS END=55582754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:33,0 chr2 55582755 . C . PASS END=55582861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,83,255:40,0 chr2 55582862 . C . PASS END=55582866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:31:0,66,990:0,80,255:25,0 chr2 55582867 . T . PASS END=55582867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:22,0 chr2 55582868 . T . PASS END=55582871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:22,0 chr2 55582872 . A . PASS END=55582887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:16:0,42,630:0,48,255:19,0 chr2 55589444 . C . PASS END=55589584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:45:0,91,1598:0,91,255:40,0 chr2 55590867 . T . PASS END=55590869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr2 55591086 . C . PASS END=55591169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,157,255:40,0 chr2 55599588 . C . PASS END=55599617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:96:0,120,1800:0,255,255:40,0 chr2 55599618 . C . PASS END=55599646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:99:0,120,1800:0,255,255:40,0 chr2 55601950 . C . PASS END=55602019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:69:0,120,1800:0,191,255:40,0 chr2 55615914 . C . PASS END=55616022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,155,255:40,0 chr2 55645952 . A . PASS END=55646052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,118,1584:0,118,255:40,0 chr2 55646153 . C . PASS END=55646215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:51:0,117,1800:0,117,255:40,0 chr2 55746938 . A . PASS END=55746939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr2 55746940 . G . PASS END=55746944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 55746945 . C . PASS END=55746946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 55746947 . G . PASS END=55746949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 55746950 . G . PASS END=55746950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 55746951 . A . PASS END=55746951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 55746952 . A . PASS END=55746952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,970:0,35,255:26,0 chr2 55746953 . G . PASS END=55746958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 55746959 . G . PASS END=55746959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 55746960 . A . PASS END=55746960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 55746961 . G . PASS END=55746961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 55746962 . G . PASS END=55746962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 55746963 . T . PASS END=55746963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 55746964 . G . PASS END=55747045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1117:0,80,255:38,0 chr2 55747046 . T . PASS END=55747046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 55747047 . G . PASS END=55747051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 55747052 . G . PASS END=55747052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr2 55747541 . T . PASS END=55747615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,151,255:40,0 chr2 55749238 . T . PASS END=55749302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,207,255:40,0 chr2 55750857 . G . PASS END=55750958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,112,1551:0,112,255:40,0 chr2 55756014 . G . PASS END=55756016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 55756017 . A . PASS END=55756018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:29,1 chr2 55756019 . T . PASS END=55756019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,972:0,60,255:28,0 chr2 55756020 . T . PASS END=55756044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:31:0,90,1258:0,93,255:40,0 chr2 55756045 . A . PASS END=55756045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1340:0,76,255:36,0 chr2 55756046 . T . PASS END=55756118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:37:0,85,1438:0,85,255:40,0 chr2 55756119 . G . PASS END=55756120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:36:0,73,1201:0,73,255:34,0 chr2 55756121 . G . PASS END=55756121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 55756122 . A . PASS END=55756122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1068:0,42,255:31,0 chr2 55756123 . G . PASS END=55756123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1218:0,61,255:31,0 chr2 55756124 . A . PASS END=55756128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr2 55761009 . G . PASS END=55761096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:39:0,102,1438:0,102,255:40,0 chr2 55762848 . A . PASS END=55762919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:88:0,120,1800:0,232,255:40,0 chr2 55762920 . A . PASS END=55762956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:95:0,120,1800:0,255,255:40,0 chr2 55762957 . C T, 335.47 PASS DP=97;MQ=250.00;FractionInformativeReads=0.990 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,96,0:1.000,0.000:96:0,44,0:0,52,0:285:373,288,0,3681,288,3681:255,255,0:0,0:3.3547e+02,2.8547e+02,0.0000e+00,4.4853e+02,3.2024e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,62:0,0,48,48 chr2 55762958 . A . PASS END=55762994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,200,255:40,0 chr2 55762995 . A . PASS END=55763034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,188,255:40,0 chr2 55764619 . T . PASS END=55764619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr2 55764620 . T . PASS END=55764706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1180:0,87,255:40,0 chr2 55764707 . C . PASS END=55764716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:41:0,81,1215:0,110,255:31,0 chr2 55764717 . C . PASS END=55764721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:36:0,75,1125:0,108,255:25,0 chr2 55765901 . A . PASS END=55765917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,144,255:40,0 chr2 55771074 . A . PASS END=55771087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,142,255:40,0 chr2 55771088 . T . PASS END=55771123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,131,255:40,0 chr2 55771124 . G . PASS END=55771160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,193,255:40,0 chr2 55771161 . A G, 280.83 PASS DP=78;MQ=249.52;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,78,0:1.000,0.000:78:0,39,0:0,39,0:231:319,234,0,2958,234,2958:255,238,0:0,0:2.8083e+02,2.3083e+02,0.0000e+00,4.5000e+02,2.6560e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,47:0,0,44,34 chr2 55771162 . C . PASS END=55771198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,167,255:40,0 chr2 55771199 . G . PASS END=55771210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,163,255:40,0 chr2 55771356 . A . PASS END=55771505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,150,255:40,0 chr2 55772043 . G . PASS END=55772144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,121,255:40,0 chr2 55777047 . T . PASS END=55777090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:51:0,115,1800:0,115,255:40,0 chr2 55777091 . C . PASS END=55777091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,7:64:39:64:0,39,1684:0,39,255:40,0 chr2 55777092 . T . PASS END=55777096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,158,255:40,0 chr2 55777097 . C . PASS END=55777097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,6:64:78:64:0,78,1903:0,78,255:40,0 chr2 55777098 . T . PASS END=55777142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,111,1665:0,123,255:40,0 chr2 55785911 . C . PASS END=55785911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 55785912 . T . PASS END=55785912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:21,0 chr2 55785913 . T . PASS END=55785917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 55785918 . G . PASS END=55785918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 55785919 . C . PASS END=55785938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:27:0,80,927:0,80,255:34,0 chr2 55785939 . T . PASS END=55785939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,906:0,55,255:31,0 chr2 55785940 . T . PASS END=55786061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:35:0,80,1091:0,80,255:40,0 chr2 55786062 . G . PASS END=55786065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:32:0,78,1170:0,89,255:26,0 chr2 55786066 . T . PASS END=55786075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1017:0,84,255:28,0 chr2 55786076 . A . PASS END=55786089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr2 55786090 . C . PASS END=55786095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr2 55786096 . T . PASS END=55786099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 55786100 . T . PASS END=55786104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:18,0 chr2 55791449 . C . PASS END=55791621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:90:39:0,90,1350:0,102,255:40,0 chr2 55791622 . A . PASS END=55791625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:40:0,60,900:0,120,255:26,0 chr2 55791626 . A . PASS END=55791633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:42:27:0,42,630:0,74,255:18,0 chr2 55792038 . C . PASS END=55792177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:53:0,120,1800:0,153,255:40,1 chr2 55795330 . C . PASS END=55795499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:33:0,86,1108:0,86,255:40,0 chr2 55800755 . A . PASS END=55800913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:98:36:0,98,1413:0,98,255:40,0 chr2 55804451 . C . PASS END=55804492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:124,0:124:99:117:0,120,1800:0,255,255:40,0 chr2 55805383 . C . PASS END=55805402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:99:97:0,120,1800:0,230,255:40,0 chr2 55805403 . G . PASS END=55805439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,1:118:99:105:0,120,1800:0,255,255:40,0 chr2 55805440 . T C, 359.98 PASS DP=104;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,104,0:1.000,0.000:104:0,56,0:0,48,0:310:398,313,0,498,498,498:255,255,0:0,0:3.5998e+02,3.0998e+02,0.0000e+00,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,71,33:0,0,57,47 chr2 55805441 . G . PASS END=55805468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:80:91:0,80,1800:0,80,255:40,8 chr2 55805469 . A . PASS END=55805469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,8:93:8:93:0,8,2971:0,8,255:40,4 chr2 55805470 . A . PASS END=55805477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,196,255:40,0 chr2 55805478 . T . PASS END=55805478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:92:0,120,1800:0,255,255:40,0 chr2 55806815 . C . PASS END=55806917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,154,255:40,0 chr2 55808703 . A . PASS END=55808792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:40:0,84,1260:0,99,255:40,0 chr2 55808793 . A . PASS END=55808793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 55808794 . C . PASS END=55808796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 55808797 . A . PASS END=55808803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,947:0,67,255:26,0 chr2 55808804 . G . PASS END=55808804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 55808805 . T . PASS END=55808824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,61,255:26,0 chr2 55808825 . G . PASS END=55808833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr2 55808834 . C . PASS END=55808834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 55812187 . G . PASS END=55812303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:63:0,120,1800:0,143,255:40,0 chr2 55813754 . C . PASS END=55813870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:54:0,107,1800:0,107,255:40,0 chr2 55816015 . C . PASS END=55816092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:64:0,120,1800:0,175,255:40,0 chr2 55818641 . C . PASS END=55818646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:109:0,120,1800:0,255,255:40,0 chr2 55825552 . C . PASS END=55825901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:33:0,87,1305:0,87,255:40,0 chr2 55825902 . A . PASS END=55825902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1413:0,71,255:36,0 chr2 55825903 . G . PASS END=55825966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1315:0,95,255:37,0 chr2 55825967 . T . PASS END=55825967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr2 55825968 . C . PASS END=55825970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 55825971 . T . PASS END=55825971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr2 55825972 . T . PASS END=55825983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,99,1485:0,108,255:37,0 chr2 55825984 . A . PASS END=55825984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1269:0,78,255:36,0 chr2 55825985 . G . PASS END=55826039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1357:0,95,255:40,0 chr2 55826040 . T . PASS END=55826040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1208:0,76,255:34,0 chr2 55826041 . C . PASS END=55826142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:40:0,87,1305:0,96,255:40,0 chr2 55826143 . T . PASS END=55826150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 55826151 . C . PASS END=55826152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 55826153 . A . PASS END=55826153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:25,0 chr2 55826154 . C . PASS END=55826158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 55826159 . G . PASS END=55826175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:25,0 chr2 55831114 . C . PASS END=55831212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:51:0,117,1755:0,150,255:40,0 chr2 55842587 . C . PASS END=55842642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:85:0,120,1800:0,225,255:40,0 chr2 55844280 . C . PASS END=55844280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 55844281 . G . PASS END=55844322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,800:0,63,255:26,0 chr2 55844323 . C . PASS END=55844336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:31,0 chr2 55844337 . A . PASS END=55844337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 55844338 . G . PASS END=55844373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:31:0,82,1081:0,82,255:34,0 chr2 55844374 . G . PASS END=55844374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 55844375 . T . PASS END=55844384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1189:0,86,255:33,0 chr2 55844385 . G . PASS END=55844396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:23:0,60,900:0,69,255:23,0 chr2 55844397 . T . PASS END=55844397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 55844398 . C . PASS END=55844404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 55844405 . C . PASS END=55844405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr2 55844406 . G . PASS END=55844407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 55844408 . C . PASS END=55844415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr2 55844416 . C . PASS END=55844421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,53,255:18,0 chr2 55863372 . T . PASS END=55863374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:32,0 chr2 55863375 . C . PASS END=55863403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:34:0,85,1150:0,85,255:40,0 chr2 55863404 . G . PASS END=55863505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,105,1480:0,108,255:40,0 chr2 55863506 . G . PASS END=55863506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:34,0 chr2 55863507 . G . PASS END=55863527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1202:0,83,255:35,0 chr2 55864687 . C . PASS END=55864734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,175,255:40,0 chr2 55867756 . T . PASS END=55867756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 55867762 . C . PASS END=55867840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,135,255:40,0 chr2 55870293 . C . PASS END=55870348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:53:0,116,1800:0,116,255:40,0 chr2 55870454 . A . PASS END=55870560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:49:0,114,1710:0,131,255:40,0 chr2 55871772 . C . PASS END=55871855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:56:0,120,1800:0,153,255:40,0 chr2 55872484 . C . PASS END=55872567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:85:0,120,1800:0,231,255:40,0 chr2 55873394 . C . PASS END=55873457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:72:0,120,1800:0,170,255:40,0 chr2 55873550 . C . PASS END=55873621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:68:0,120,1800:0,186,255:40,0 chr2 55874482 . C . PASS END=55874588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,114,1706:0,114,255:40,0 chr2 55882035 . C . PASS END=55882088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:76:0,120,1800:0,189,255:40,0 chr2 55883266 . C . PASS END=55883279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,134,255:40,0 chr2 55883280 . A . PASS END=55883316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,124,255:40,0 chr2 55883317 . G T, 233.14 PASS DP=62;MQ=244.06;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,33,0:0,29,0:183:271,186,0,2375,186,2375:255,186,0:0,0:2.3314e+02,1.8314e+02,0.0000e+00,4.5000e+02,2.1791e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,27:0,0,24,38 chr2 55883318 . G . PASS END=55883354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,162,255:40,0 chr2 55883355 . C . PASS END=55883355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 55883440 . C . PASS END=55883466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,155,255:40,0 chr2 55883467 . C . PASS END=55883506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,114,1710:0,130,255:40,0 chr2 55887292 . C . PASS END=55887328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:70:0,120,1800:0,202,255:40,0 chr2 55889091 . T . PASS END=55889099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:96:0,120,1800:0,255,255:40,0 chr2 55889100 . G . PASS END=55889161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:82:0,120,1800:0,230,255:40,0 chr2 55894126 . C . PASS END=55894209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,120,1800:0,128,255:40,0 chr2 55894210 . C . PASS END=55894228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,127,255:40,0 chr2 55894997 . C . PASS END=55895093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,136,255:40,0 chr2 55898454 . C . PASS END=55898511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,2:125:99:108:0,120,1800:0,255,255:40,0 chr2 55899130 . T . PASS END=55899181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,146,255:40,0 chr2 55900028 . T . PASS END=55900204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:37:0,84,1217:0,94,255:40,0 chr2 55900205 . T . PASS END=55900211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:33:0,72,1080:0,99,255:25,0 chr2 55900212 . T . PASS END=55900212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1041:0,49,255:22,0 chr2 55900213 . G . PASS END=55900214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 55900217 . A . PASS END=55900217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 55906817 . C . PASS END=55906930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:59:0,120,1800:0,141,255:40,0 chr2 55907847 . C . PASS END=55907894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:83:51:0,83,1800:0,83,255:40,0 chr2 55907967 . T . PASS END=55908053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:84:41:0,84,1445:0,84,255:40,0 chr2 55910920 . C . PASS END=55910970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:49:0,120,1800:0,131,255:40,0 chr2 55912078 . C . PASS END=55912082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 55912083 . A . PASS END=55912119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1197:0,99,255:38,0 chr2 55912120 . T C, 167.21 PASS DP=40;MQ=249.57;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,24,0:0,16,0:117:205,120,0,305,305,305:255,120,0:0,0:1.6721e+02,1.1721e+02,0.0000e+00,3.0198e+02,3.3675e+02,3.0499e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,21,19:0,0,21,19 chr2 55912121 . C . PASS END=55912157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:40:0,90,1332:0,90,255:40,0 chr2 55912158 . G . PASS END=55912183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:39:0,93,1395:0,110,255:40,0 chr2 55913505 . C . PASS END=55913579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,120,1800:0,144,255:40,0 chr2 55914780 . C . PASS END=55914840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,120,1800:0,132,255:40,0 chr2 55920798 . C . PASS END=55920802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr2 55920803 . G . PASS END=55920920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1039:0,84,255:40,0 chr2 55920921 . A . PASS END=55920921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 55920922 . G . PASS END=55920930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 55920931 . A . PASS END=55920936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr2 55920937 . A . PASS END=55920958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:18:0,47,765:0,47,255:18,0 chr2 56093120 . T . PASS END=56093120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 56093262 . A . PASS END=56093262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 56093859 . T . PASS END=56093859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 56094026 . C . PASS END=56094026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr2 56094056 . C . PASS END=56094056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr2 56094062 . A . PASS END=56094062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:96:0,120,1800:0,255,255:40,0 chr2 56094208 . C . PASS END=56094361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:28:0,81,1215:0,84,255:40,0 chr2 56094362 . C . PASS END=56094362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 56094363 . T . PASS END=56094367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,930:0,81,255:27,0 chr2 56094368 . T . PASS END=56094369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 56097855 . T . PASS END=56097896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:39:0,86,1376:0,86,255:40,0 chr2 56097897 . A . PASS END=56097897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1506:0,77,255:40,0 chr2 56097898 . A . PASS END=56098050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:44:0,96,1568:0,96,255:40,0 chr2 56098055 . A . PASS END=56098055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 56098135 . T . PASS END=56098234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:42:0,114,1710:0,126,255:40,0 chr2 56098235 . T . PASS END=56098258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,111,1665:0,124,255:40,0 chr2 56102071 . A . PASS END=56102071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1426:0,101,255:34,0 chr2 56102081 . C . PASS END=56102200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:89:40:0,89,1261:0,89,255:40,0 chr2 56103758 . C . PASS END=56103877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:66:0,120,1800:0,198,255:40,0 chr2 56103891 . T . PASS END=56103891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:85:0,120,1800:0,217,255:40,1 chr2 56104881 . C . PASS END=56105000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,104,1421:0,104,255:40,0 chr2 56108747 . C . PASS END=56108865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:81:42:0,81,1215:0,126,255:40,0 chr2 56108866 . A . PASS END=56108869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:66:41:0,66,990:0,123,255:26,0 chr2 56144800 . C . PASS END=56144801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr2 56144802 . T . PASS END=56144802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 56144803 . G . PASS END=56144815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:19,0 chr2 56144816 . T . PASS END=56144818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 56144819 . A . PASS END=56144819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:18,0 chr2 56144820 . C . PASS END=56144823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 56144824 . G . PASS END=56144831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr2 56144832 . C . PASS END=56144832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 56144833 . C . PASS END=56144846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 56144847 . A . PASS END=56144847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 56144848 . T . PASS END=56144849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 56144850 . C . PASS END=56144850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:19,0 chr2 56144851 . G . PASS END=56144853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 56144854 . G . PASS END=56144854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 56144855 . G . PASS END=56144856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 56144857 . A . PASS END=56144859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 56144860 . G . PASS END=56144865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 56144866 . A . PASS END=56144866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 56144867 . G . PASS END=56144885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 56144886 . G . PASS END=56144886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 56144887 . C . PASS END=56144887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 56144888 . T . PASS END=56144888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 56144889 . G . PASS END=56144900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 56144901 . A . PASS END=56144901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 56144902 . T . PASS END=56144904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 56144905 . C . PASS END=56144907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,828:0,53,255:19,0 chr2 56144908 . A . PASS END=56144909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 56144910 . T . PASS END=56144910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 56144911 . T . PASS END=56144913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 56144914 . T . PASS END=56144914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr2 56144915 . T . PASS END=56144918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 56144919 . C . PASS END=56144920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr2 56144921 . A . PASS END=56144940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 56144941 . C . PASS END=56144944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 56144945 . T . PASS END=56144946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 56144947 . C . PASS END=56144947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 56144948 . A . PASS END=56144948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:30,0 chr2 56144949 . G . PASS END=56144962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:30,0 chr2 56144963 . A . PASS END=56144963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 56144964 . A . PASS END=56144968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr2 56144969 . A . PASS END=56144969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:31,0 chr2 56144970 . C . PASS END=56145186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:32:0,83,1216:0,83,255:40,0 chr2 56145209 . T . PASS END=56145219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:99:0,120,1800:0,255,255:40,0 chr2 56145354 . C . PASS END=56145402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,176,255:40,0 chr2 56149495 . C . PASS END=56149582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:62:0,120,1800:0,172,255:40,0 chr2 56150034 . C . PASS END=56150074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,118,1800:0,118,255:40,0 chr2 56150846 . C . PASS END=56150846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 56150847 . T . PASS END=56150847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 56150848 . G . PASS END=56150863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr2 56150864 . C . PASS END=56150869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 56150870 . G . PASS END=56150870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 56150871 . C . PASS END=56150874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:17,0 chr2 56150875 . G . PASS END=56150876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 56150877 . C . PASS END=56150884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,621:0,41,255:19,0 chr2 56150885 . G . PASS END=56150886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 56150887 . A . PASS END=56150887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 56150888 . G . PASS END=56150892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 56150893 . C . PASS END=56150893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr2 56150894 . A . PASS END=56150894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 56150895 . G . PASS END=56150898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 56150899 . A . PASS END=56150899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 56150900 . G . PASS END=56150903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 56150904 . A . PASS END=56150904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,922:0,7,255:26,0 chr2 56150905 . G . PASS END=56150905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr2 56150906 . C . PASS END=56150906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:26,0 chr2 56150907 . C . PASS END=56150910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,1009:0,68,255:28,0 chr2 56150911 . T . PASS END=56150913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 56150914 . G . PASS END=56150914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr2 56150915 . T . PASS END=56150918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr2 56150919 . A . PASS END=56150919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:29,0 chr2 56150920 . T . PASS END=56150940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1186:0,86,255:32,0 chr2 56150941 . C . PASS END=56150941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 56150942 . C . PASS END=56150942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:29,0 chr2 56150943 . G . PASS END=56150943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 56150944 . C . PASS END=56150944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,986:0,24,255:28,0 chr2 56150945 . G . PASS END=56150945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 56150946 . G . PASS END=56150946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1130:0,52,255:30,0 chr2 56150947 . C . PASS END=56150947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1015:0,30,255:30,0 chr2 56150948 . G . PASS END=56150949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1189:0,99,255:33,0 chr2 56150950 . C . PASS END=56150950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:21:33:0,21,1023:0,21,255:30,0 chr2 56150951 . A . PASS END=56150951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1008:0,49,255:30,0 chr2 56150952 . G . PASS END=56150953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1150:0,99,255:33,0 chr2 56150954 . A . PASS END=56150954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,992:0,27,255:30,0 chr2 56150955 . G . PASS END=56150956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:33,0 chr2 56150957 . A . PASS END=56150957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1102:0,44,255:31,0 chr2 56150958 . G . PASS END=56150964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1105:0,82,255:33,0 chr2 56150965 . A . PASS END=56150965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,962:0,27,255:27,0 chr2 56150966 . A . PASS END=56150966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1057:0,66,255:29,0 chr2 56150967 . A . PASS END=56150970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1066:0,82,255:30,0 chr2 56150971 . A . PASS END=56150974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1000:0,60,255:28,0 chr2 56150975 . A . PASS END=56150975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 56150976 . A . PASS END=56150976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,948:0,60,255:28,0 chr2 56150977 . A . PASS END=56150977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,919:0,59,255:26,0 chr2 56150978 . G . PASS END=56150982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 56150983 . A . PASS END=56150983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:24,0 chr2 56150984 . G . PASS END=56150989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,980:0,73,255:26,0 chr2 56150990 . A . PASS END=56150990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,816:0,40,255:24,0 chr2 56150991 . G . PASS END=56150995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 56150996 . G . PASS END=56150998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr2 56150999 . G . PASS END=56150999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,903:0,45,255:24,0 chr2 56151000 . A . PASS END=56151012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,61,255:25,0 chr2 56151013 . G . PASS END=56151013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 56151014 . G . PASS END=56151016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 56151017 . G . PASS END=56151018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,634:0,49,255:19,0 chr2 56151019 . C . PASS END=56151020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 56151021 . C . PASS END=56151033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr2 56151034 . C . PASS END=56151038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 56151039 . T . PASS END=56151043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 56151044 . A . PASS END=56151044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 56151045 . G . PASS END=56151045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 56151046 . C . PASS END=56151046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 56151047 . C . PASS END=56151047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 56151048 . C . PASS END=56151049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,559:0,34,255:13,0 chr2 56151050 . G . PASS END=56151058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:15,0 chr2 56151059 . C . PASS END=56151059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 56151060 . G . PASS END=56151062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 56151063 . C . PASS END=56151064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 56151065 . G . PASS END=56151067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 56151068 . C . PASS END=56151068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr2 56151069 . A . PASS END=56151087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 56151088 . G . PASS END=56151088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 56151089 . C . PASS END=56151131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:17,0 chr2 56151132 . A . PASS END=56151132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 56151133 . G . PASS END=56151145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 56151146 . C . PASS END=56151147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 56151148 . G . PASS END=56151159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 56151160 . C . PASS END=56151160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 56151161 . C . PASS END=56151162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 56151163 . C . PASS END=56151163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 56151164 . A . PASS END=56151167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,643:0,51,255:17,0 chr2 56151168 . C . PASS END=56151168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 56151169 . A . PASS END=56151176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 56151177 . C . PASS END=56151177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 56151178 . A . PASS END=56151178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 56151179 . C . PASS END=56151179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 56151180 . G . PASS END=56151185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 56151186 . A . PASS END=56151187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:15,0 chr2 56151291 . G . PASS END=56151291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 56410328 . A . PASS END=56410337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,910:0,81,255:27,0 chr2 56410338 . C . PASS END=56410338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 56410339 . C . PASS END=56410340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 56410341 . T . PASS END=56410343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 56410344 . C . PASS END=56410351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr2 56410352 . T . PASS END=56410353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1023:0,71,255:29,0 chr2 56410354 . A . PASS END=56410357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 56410358 . T . PASS END=56410358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 56410359 . G . PASS END=56410389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:33,0 chr2 56410390 . G . PASS END=56410422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,734:0,69,255:26,0 chr2 56410423 . G . PASS END=56410423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 56410424 . G . PASS END=56410435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr2 56410436 . G . PASS END=56410439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,690:0,46,255:18,0 chr2 56410601 . A . PASS END=56410744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1227:0,81,255:40,0 chr2 56410745 . A . PASS END=56410745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1224:0,75,255:28,0 chr2 56410746 . C . PASS END=56410761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr2 56410762 . C . PASS END=56410762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 56410763 . C . PASS END=56410768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 56410769 . C . PASS END=56410771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr2 56410772 . T . PASS END=56410776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 56410777 . A . PASS END=56410787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,909:0,64,255:26,0 chr2 56410788 . C . PASS END=56410788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 56410789 . T . PASS END=56410798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr2 56410799 . G . PASS END=56410800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr2 56410801 . C . PASS END=56410817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,931:0,64,255:26,0 chr2 56410818 . G . PASS END=56410819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 56410820 . C . PASS END=56410826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:24,0 chr2 56410827 . C . PASS END=56410827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 56410828 . A . PASS END=56410828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 56410829 . A . PASS END=56410829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:22,0 chr2 56410830 . G . PASS END=56410838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:26,0 chr2 56410839 . G . PASS END=56410839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 56410840 . C . PASS END=56410840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 56410841 . A . PASS END=56410841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:26,0 chr2 56410842 . G . PASS END=56410842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 56410843 . A . PASS END=56410843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr2 56410844 . G . PASS END=56410846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 56410847 . C . PASS END=56410848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 56410849 . G . PASS END=56410849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 56410850 . A . PASS END=56410852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 56410853 . A . PASS END=56410853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:28,0 chr2 56410854 . G . PASS END=56410858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1034:0,90,255:30,0 chr2 56410859 . C . PASS END=56410859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1030:0,43,255:28,0 chr2 56410860 . T . PASS END=56410882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1012:0,90,255:30,0 chr2 56410883 . C . PASS END=56410883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr2 56410884 . G . PASS END=56410888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1034:0,90,255:30,0 chr2 56410889 . C . PASS END=56410891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 56410892 . C . PASS END=56410893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 56410894 . C . PASS END=56410898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:26,0 chr2 56410899 . A . PASS END=56410901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:28:0,54,810:0,68,255:19,0 chr2 56410902 . G . PASS END=56410911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,68,255:18,0 chr2 56410912 . A . PASS END=56410917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:30:28:0,30,450:0,67,255:13,0 chr2 56410918 . T . PASS END=56410923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:21:26:0,21,315:0,78,255:8,0 chr2 56410924 . T . PASS END=56410926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:15:25:0,15,225:0,62,255:6,0 chr2 56410927 . C . LowGQ END=56410943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:25,0:25:0:21:0,0,0:0,53,255:2,0 chr2 56410944 . C CCG, 107.17 PASS DP=21;MQ=250.00;FractionInformativeReads=0.952 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,8,0:0,12,0:57:139,60,0,766,60,766:255,0,15:0,28:1.0717e+02,5.7168e+01,8.2835e-06,4.5000e+02,9.1962e+01,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,7,13:0,0,7,13 chr2 56410945 . C . LowGQ END=56410945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,19:20:0:20:0,0,0:255,21,0:18,0 chr2 56410946 . G . PASS END=56410947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 56410948 . C . PASS END=56410948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr2 56410949 . C . PASS END=56410955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,652:0,54,255:18,0 chr2 56410956 . A . PASS END=56410956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 56410957 . G . PASS END=56410973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,629:0,54,255:18,0 chr2 56410974 . A . PASS END=56410974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 56410975 . G . PASS END=56410994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:16,0 chr2 56410995 . C T, 50.00 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=0.453;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,11,0:0.611,0.000:18:3,3,0:4,8,0:47:85,0,48,385,248,633:255,0,217:6,0:5.0000e+01,7.7400e-05,5.1055e+01,3.8543e+02,2.8238e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,6,6,5:3,4,4,7 chr2 56410996 . G . PASS END=56411001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 56411002 . G . PASS END=56411002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:16,0 chr2 56411003 . C . PASS END=56411020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 56411021 . A . PASS END=56411021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 56411022 . G . PASS END=56411028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 56411029 . A . PASS END=56411029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 56411030 . G . PASS END=56411032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 56411033 . G . PASS END=56411047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr2 56411048 . C . PASS END=56411055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 56411056 . G . PASS END=56411071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 56411072 . C . PASS END=56411072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 56411073 . G . PASS END=56411092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 56411093 . T . PASS END=56411096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 56411097 . C . PASS END=56411106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,474:0,42,255:14,0 chr2 56411107 . G . PASS END=56411119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 56411120 . C . PASS END=56411121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 56411122 . C . PASS END=56411126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:10:0,27,405:0,30,255:9,0 chr2 56411127 . T . PASS END=56411127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr2 56411128 . C . PASS END=56411142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 56411143 . C . PASS END=56411153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 56411154 . C . PASS END=56411156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:8,0 chr2 56411157 . T C, 71.11 PASS DP=8;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,1,0:0,7,0:21:109,24,0,304,24,304:255,24,0:0,0:7.1110e+01,2.1110e+01,3.3778e-02,3.0132e+02,5.5880e+01,3.0432e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,7:0,0,8,0 chr2 56411158 . C . PASS END=56411158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 56411159 . C . PASS END=56411166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 56411167 . C . PASS END=56411169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 56411170 . A . PASS END=56411170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr2 56411171 . G . PASS END=56411177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr2 56411178 . C . PASS END=56411191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,235:8,0 chr2 56411192 . A . PASS END=56411194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 56411195 . G . PASS END=56411235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 56411236 . C . PASS END=56411242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:4:0,6,90:0,12,155:3,0 chr2 56411243 . A . PASS END=56411244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,172:2,0 chr2 56411760 . A . PASS END=56411767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr2 56411768 . G . PASS END=56411768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 56411769 . G . PASS END=56411770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 56411771 . G . PASS END=56411771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 56411772 . G . PASS END=56411779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,398:0,36,255:12,0 chr2 56411780 . C . PASS END=56411780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,365:0,5,255:11,0 chr2 56411781 . G . PASS END=56411794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:11,0 chr2 56411795 . G . PASS END=56411795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 56411796 . G . PASS END=56411810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,31,255:13,0 chr2 56411811 . T . PASS END=56411816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 56411817 . C T, 92.14 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,8,0:0,7,0:42:130,45,0,574,45,574:255,45,0:0,0:9.2143e+01,4.2143e+01,2.6508e-04,4.5000e+02,7.6913e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,5:0,0,9,6 chr2 56411818 . C . PASS END=56411818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 56411819 . A . PASS END=56411819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 56411820 . G . PASS END=56411820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 56411821 . C . PASS END=56411822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 56411823 . C . PASS END=56411823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 56411824 . C . PASS END=56411826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 56411827 . C . PASS END=56411827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 56411828 . C . PASS END=56411845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 56411846 . G . PASS END=56411846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 56411847 . C . PASS END=56411848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 56411849 . C . PASS END=56411849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 56411850 . G . PASS END=56411854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 56411855 . G . PASS END=56411855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:14,0 chr2 56411856 . G . PASS END=56411886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:19,0 chr2 56411887 . A . PASS END=56411889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 56411890 . T . PASS END=56411891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,690:0,44,255:19,0 chr2 56411892 . C . PASS END=56411892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 56411893 . T . PASS END=56411893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:19,0 chr2 56411894 . G . PASS END=56411894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 56411895 . C . PASS END=56411895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 56411896 . A . PASS END=56411896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 56411897 . G . PASS END=56411897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 56411898 . T . PASS END=56411899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:17,0 chr2 56411900 . G . PASS END=56411900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:17,0 chr2 56411901 . A . PASS END=56411904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,753:0,49,255:19,0 chr2 56411905 . A . PASS END=56411907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 56411908 . A . PASS END=56411908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 56411909 . G . PASS END=56411912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 56411913 . C . PASS END=56411914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 56411915 . G . PASS END=56411921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 56411922 . A . PASS END=56411922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 56411923 . G . PASS END=56411936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 56411937 . G . PASS END=56411942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 56411943 . G . PASS END=56411945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 56411946 . A . PASS END=56411946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:19,0 chr2 56411947 . A . PASS END=56411948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 56411949 . G . PASS END=56411977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:19,0 chr2 56411978 . C . PASS END=56411988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 56411989 . T . PASS END=56411989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 56411990 . G . PASS END=56411994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr2 56411995 . G . PASS END=56411995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:12,0 chr2 56411996 . C . PASS END=56412020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,390:0,36,255:13,0 chr2 56412021 . A . PASS END=56412021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 56412022 . T . PASS END=56412025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr2 56412026 . C . PASS END=56412026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 56412027 . G . PASS END=56412033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 56412034 . A . PASS END=56412035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 56419612 . G . PASS END=56419623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,86,255:29,0 chr2 56419624 . A . PASS END=56419624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 56419625 . A . PASS END=56419627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 56419628 . T . PASS END=56419628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 56419629 . C . PASS END=56419795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1033:0,84,255:40,0 chr2 56419796 . A . PASS END=56419796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1003:0,41,255:30,0 chr2 56419797 . G . PASS END=56419801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1213:0,96,255:34,0 chr2 56419802 . A . PASS END=56419802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1085:0,69,255:32,0 chr2 56419803 . G . PASS END=56419810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1205:0,86,255:35,0 chr2 56419811 . T . PASS END=56419811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:33,0 chr2 56419812 . G . PASS END=56419850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1178:0,83,255:34,0 chr2 56419851 . A . PASS END=56419851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 56419852 . G . PASS END=56419854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 56419855 . G . PASS END=56419855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 56419856 . A . PASS END=56419856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 56419857 . G . PASS END=56419857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr2 56419858 . G . PASS END=56419861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 56419862 . A . PASS END=56419862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:26,0 chr2 56419863 . G . PASS END=56419865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 56419866 . T . PASS END=56419866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr2 56419867 . G . PASS END=56419868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 56419869 . A . PASS END=56419869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr2 56419870 . G . PASS END=56419879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 56419880 . G . PASS END=56419880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 56419881 . C . PASS END=56419881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 56419882 . A . PASS END=56419882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 56419883 . G . PASS END=56419926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1011:0,84,255:36,0 chr2 56419927 . G . PASS END=56419956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,978:0,60,255:27,0 chr2 56419957 . G . PASS END=56419958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 56419959 . T . PASS END=56419961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 56419962 . C . PASS END=56419967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 56419968 . C . PASS END=56419969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 56419970 . G . PASS END=56420025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1025:0,80,255:35,0 chr2 56420026 . A . PASS END=56420026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 56420027 . G . PASS END=56420064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1135:0,80,255:31,0 chr2 56420065 . G . PASS END=56420068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 56420069 . G . PASS END=56420295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1139:0,80,255:40,0 chr2 56420296 . C . PASS END=56420296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:33,0 chr2 56420297 . G . PASS END=56420315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,86,255:34,0 chr2 56420316 . A . PASS END=56420317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 56420318 . A . PASS END=56420325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:28,0 chr2 56420326 . C . PASS END=56420327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 56420328 . C . PASS END=56420360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1094:0,90,255:30,0 chr2 56420361 . C . PASS END=56420362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 56420363 . C . PASS END=56420371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:31,0 chr2 56420372 . G . PASS END=56420374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 56420375 . G . PASS END=56420575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:84:32:0,84,1195:0,86,255:40,0 chr2 56570014 . A . PASS END=56570043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:38:0,87,1369:0,87,255:40,0 chr2 56570044 . A . PASS END=56570090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,133,255:40,0 chr2 56599479 . G . PASS END=56599483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:30,0 chr2 56599484 . C . PASS END=56599484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 56599485 . C . PASS END=56599601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1013:0,82,255:40,0 chr2 56599602 . C . PASS END=56599602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:30,0 chr2 56599603 . C . PASS END=56599613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1185:0,80,255:30,0 chr2 56602951 . G . PASS END=56602953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr2 56602954 . T . PASS END=56602954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1089:0,68,255:32,0 chr2 56602955 . C . PASS END=56603061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1193:0,86,255:40,0 chr2 56603062 . T . PASS END=56603062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr2 56603063 . C . PASS END=56603063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 56603064 . T . PASS END=56603065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 56603066 . T . PASS END=56603067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 56603068 . A . PASS END=56603068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 56603069 . A . PASS END=56603069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 56603070 . G . PASS END=56603070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 56606885 . G . PASS END=56606983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,116,1643:0,116,255:40,0 chr2 56611401 . G . PASS END=56611437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,166,255:40,0 chr2 56611438 . G . PASS END=56611490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:76:0,120,1800:0,195,255:40,0 chr2 58268200 . T . PASS END=58268203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:77:0,120,1800:0,218,255:40,0 chr2 58268627 . C . PASS END=58268688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,150,255:40,0 chr2 58273659 . C . PASS END=58273695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 58273696 . G . PASS END=58273696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 58273697 . C . PASS END=58273698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 58273699 . G . PASS END=58273702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 58273703 . A . PASS END=58273703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 58273704 . G . PASS END=58273705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 58273706 . G . PASS END=58273706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 58273707 . T . PASS END=58273710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 58273711 . G . PASS END=58273712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 58273713 . T . PASS END=58273721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 58273722 . A . PASS END=58273734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 58273735 . C . PASS END=58273735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 58273736 . A . PASS END=58273747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,488:0,39,255:13,0 chr2 58273748 . C . PASS END=58273748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 58273749 . C . PASS END=58273752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 58273753 . C . PASS END=58273753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 58273754 . C . PASS END=58273755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 58273756 . T . PASS END=58273756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 58273757 . C . PASS END=58273794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 58273795 . G . PASS END=58273795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 58273796 . G . PASS END=58273799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 58273800 . C . PASS END=58273800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 58273801 . G . PASS END=58273811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr2 58273812 . G . PASS END=58273819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 58273820 . C . PASS END=58273820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:13,0 chr2 58273821 . T . PASS END=58273826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 58273827 . G . PASS END=58273828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 58273829 . C . PASS END=58273832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 58273833 . T . PASS END=58273845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 58273846 . C . PASS END=58273846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 58273847 . G . PASS END=58273859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 58273860 . A . PASS END=58273860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 58273861 . G . PASS END=58273866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 58273867 . A . PASS END=58273867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 58273868 . G . PASS END=58273870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 58273871 . A . PASS END=58273872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 58273873 . G . PASS END=58273909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:17,0 chr2 58273910 . C . PASS END=58273911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 58273912 . C . PASS END=58273912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 58273913 . C . PASS END=58273913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 58273914 . G . PASS END=58273916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 58273917 . G . PASS END=58273917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 58273918 . G . PASS END=58273944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:18,0 chr2 58273945 . T . PASS END=58273945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 58273946 . C . PASS END=58273948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 58273949 . A . PASS END=58273950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 58273951 . C . PASS END=58273951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 58273952 . G . PASS END=58273954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 58273955 . A . PASS END=58273955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr2 58273956 . G . PASS END=58273956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 58273957 . G . PASS END=58273963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 58273964 . G . PASS END=58273964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 58273965 . C . PASS END=58273967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 58273968 . T . PASS END=58273973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 58273974 . C . PASS END=58273993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr2 58273994 . C . PASS END=58273994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 58273995 . T . PASS END=58273999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 58274000 . C . PASS END=58274000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 58274001 . C . PASS END=58274001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 58274002 . C . PASS END=58274002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 58274003 . G . PASS END=58274020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 58274021 . G . PASS END=58274023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 58274024 . T . PASS END=58274045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 58274046 . C . PASS END=58274055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 58274056 . T . PASS END=58274057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 58274058 . C . PASS END=58274069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 58274070 . C . PASS END=58274081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 58274082 . A . PASS END=58274082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 58274083 . A . PASS END=58274086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 58274542 . A . PASS END=58274611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,103,1572:0,103,255:40,0 chr2 58275713 . A . PASS END=58275722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,179,255:40,0 chr2 58275962 . A . PASS END=58276102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,108,1800:0,108,255:40,2 chr2 58285487 . A . PASS END=58285530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,99,1485:0,99,255:40,0 chr2 58311224 . C . PASS END=58311273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,115,1800:0,115,255:40,0 chr2 58312016 . G . PASS END=58312085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:86:0,120,1800:0,211,255:40,2 chr2 58313474 . T . PASS END=58313561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,152,255:40,0 chr2 58315476 . T . PASS END=58315581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:64:0,120,1800:0,176,255:40,0 chr2 58316766 . T . PASS END=58316858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:64:0,120,1800:0,175,255:40,0 chr2 58350236 . G . PASS END=58350368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:46:0,96,1440:0,122,255:40,0 chr2 58358943 . C . PASS END=58359063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,99,1424:0,113,255:40,0 chr2 58362276 . T . PASS END=58362334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,132,255:40,0 chr2 58366801 . G . PASS END=58366967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:42:0,115,1529:0,115,255:40,0 chr2 58373451 . G . PASS END=58373609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:55:0,120,1800:0,147,255:40,0 chr2 58381889 . T . PASS END=58381905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,1:126:99:123:0,120,1800:0,255,255:40,0 chr2 58386385 . T . PASS END=58386385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr2 58386449 . T . PASS END=58386449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,255,255:40,0 chr2 58386466 . T . PASS END=58386466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr2 58386484 . G . PASS END=58386828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,122,255:40,0 chr2 58386900 . T . PASS END=58386935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,186,255:40,0 chr2 58387183 . C . PASS END=58387314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:69:0,120,1800:0,207,255:40,0 chr2 58388657 . C . PASS END=58388657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1437:0,74,255:39,0 chr2 58388658 . T . PASS END=58388658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 58388659 . C . PASS END=58388695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,127,255:40,0 chr2 58388696 . A G, 244.72 PASS DP=66;MQ=249.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,31,0:0,35,0:195:282,198,0,2484,198,2484:255,198,0:0,0:2.4472e+02,1.9472e+02,0.0000e+00,4.5000e+02,2.2949e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,42,24:0,0,37,29 chr2 58388697 . G . PASS END=58388733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,187,255:40,0 chr2 58388734 . G . PASS END=58388773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:56:0,120,1800:0,151,255:40,0 chr2 58388779 . A . PASS END=58388779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 58390001 . A . PASS END=58390082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,179,255:40,0 chr2 58390164 . C . PASS END=58390175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:81:0,120,1800:0,226,255:40,0 chr2 58390176 . T . PASS END=58390209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:58:0,120,1800:0,158,255:40,0 chr2 58390218 . T . LowGQ END=58390218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:0:55:0,0,1667:37,0,255:40,8 chr2 58390566 . T . PASS END=58390566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 58390569 . C . PASS END=58390641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,120,1800:0,137,255:40,0 chr2 58390642 . A . PASS END=58390652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 58390654 . T . PASS END=58390654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 58392859 . C . PASS END=58393009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:40:0,117,1506:0,120,255:40,0 chr2 58415807 . T . PASS END=58415818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1158:0,83,255:33,0 chr2 58415819 . C . PASS END=58415819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:32,0 chr2 58415820 . T . PASS END=58415857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1139:0,80,255:38,0 chr2 58415858 . A . PASS END=58415862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:30:0,72,1080:0,90,255:26,0 chr2 58415863 . C . PASS END=58415867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:24,0 chr2 58415868 . A . PASS END=58415868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:21,0 chr2 58415869 . C . PASS END=58415882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:22,0 chr2 58415883 . G . PASS END=58415883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:20,0 chr2 58415884 . T . PASS END=58415884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 58415885 . C . PASS END=58415885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr2 58415886 . A . PASS END=58415890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,892:0,61,255:21,0 chr2 58421364 . A . PASS END=58421408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,222,255:40,0 chr2 58425714 . C . PASS END=58425797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:57:0,120,1800:0,157,255:40,0 chr2 58431265 . C . PASS END=58431361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,108,1800:0,108,255:40,0 chr2 58433394 . G . PASS END=58433394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr2 58440787 . T . PASS END=58440794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr2 58440795 . G . PASS END=58440798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 58440799 . A . PASS END=58440799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 58440800 . G . PASS END=58440808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr2 58440809 . G . PASS END=58440841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:12,0 chr2 58449077 . T . PASS END=58449177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:60:0,120,1800:0,151,255:40,0 chr2 58453856 . T . PASS END=58453856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:94:0,120,1800:0,255,255:40,0 chr2 58453862 . C . PASS END=58453889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:98:0,120,1800:0,246,255:40,0 chr2 58453890 . G . PASS END=58453919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,4:111:99:85:0,120,1800:0,239,255:40,0 chr2 58456948 . C . PASS END=58457009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,148,255:40,0 chr2 58459189 . C . PASS END=58459247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,3:74:99:59:0,120,1800:0,157,255:40,0 chr2 58468350 . T . PASS END=58468350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 58468353 . C . PASS END=58468370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:25,0 chr2 58468371 . C . PASS END=58468448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1080:0,87,255:38,0 chr2 58468461 . G . PASS END=58468461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 58468474 . A . PASS END=58468474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 58468482 . A . PASS END=58468483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 58468487 . T . PASS END=58468488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1241:0,99,255:33,0 chr2 58468492 . G . PASS END=58468492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 60679700 . T . PASS END=60679702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 60679703 . A . PASS END=60679704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 60679705 . T . PASS END=60679705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr2 60679706 . T . PASS END=60679706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 60679707 . T . PASS END=60679710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,585:0,54,255:18,0 chr2 60679711 . C . PASS END=60679711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 60679712 . A . PASS END=60679720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 60679721 . G . PASS END=60679721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 60679722 . G . PASS END=60679734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,674:0,43,255:19,0 chr2 60679735 . C . PASS END=60679752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 60679753 . A . PASS END=60679781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr2 60679782 . A . PASS END=60679782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 60679783 . A . PASS END=60679790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 60679791 . G . PASS END=60679801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:14:0,32,495:0,32,255:13,0 chr2 60687539 . C . PASS END=60687685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:40:0,111,1476:0,120,255:40,0 chr2 60687686 . C . PASS END=60687686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:35,0 chr2 60687687 . C . PASS END=60687725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1215:0,91,255:39,0 chr2 60687726 . A . PASS END=60687726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:27,0 chr2 60687727 . G . PASS END=60687732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1103:0,90,255:31,0 chr2 60687733 . A . PASS END=60687733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 60687734 . T . PASS END=60687760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 60687761 . T . PASS END=60687761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr2 60687762 . C . PASS END=60687765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 60687766 . T . PASS END=60687766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 60687767 . G . PASS END=60687807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,934:0,84,255:29,0 chr2 60687808 . A . PASS END=60687808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr2 60687809 . G . PASS END=60687825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:32,0 chr2 60687826 . T . PASS END=60687827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 60687828 . C . PASS END=60687832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 60687833 . G . PASS END=60687833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:26,0 chr2 60687834 . C . PASS END=60687834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 60687835 . C . PASS END=60687836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 60687837 . T . PASS END=60687837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:25,0 chr2 60687838 . C . PASS END=60687839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 60687840 . T . PASS END=60687845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,822:0,70,255:26,0 chr2 60687846 . C . PASS END=60687846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 60687847 . T . PASS END=60687869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr2 60687870 . C . PASS END=60687871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 60687872 . A . PASS END=60687877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr2 60687878 . G . PASS END=60687878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 60687879 . G . PASS END=60687886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 60687887 . C . PASS END=60687887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 60687888 . C . PASS END=60687891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 60687892 . C . PASS END=60687921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr2 60687922 . C . PASS END=60687935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr2 60687936 . C . PASS END=60687936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 60687937 . C . PASS END=60687941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 60687942 . G . PASS END=60687958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:13:0,30,450:0,39,255:13,0 chr2 60687959 . A G, 86.13 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,5,0:0,8,0:36:124,39,0,503,39,503:255,39,0:0,0:8.6127e+01,3.6127e+01,1.0599e-03,4.5000e+02,7.0897e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,7:0,0,6,7 chr2 60687960 . C . PASS END=60687962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 60687963 . C . PASS END=60687963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 60687964 . C . PASS END=60687976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 60687977 . G . PASS END=60687977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr2 60687978 . T . PASS END=60687996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,464:0,39,255:13,0 chr2 60687997 . A . PASS END=60687997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,372:0,22,255:11,0 chr2 60687998 . A . PASS END=60687999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 60688000 . G . PASS END=60688000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 60688001 . C . PASS END=60688017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,382:0,36,255:12,0 chr2 60688018 . C . PASS END=60688028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,402:0,20,255:9,0 chr2 60688029 . A . PASS END=60688029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr2 60688030 . A . PASS END=60688030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 60688031 . G . PASS END=60688037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,344:0,30,255:11,0 chr2 60688038 . T . PASS END=60688038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 60688039 . T . PASS END=60688046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,402:0,33,255:11,0 chr2 60688047 . C . PASS END=60688047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 60688048 . T . PASS END=60688051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 60688052 . G . PASS END=60688058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 60688059 . T . PASS END=60688059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:8,0 chr2 60688060 . A . PASS END=60688068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 60688069 . G . PASS END=60688086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr2 60688087 . T . PASS END=60688087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 60688088 . C . PASS END=60688124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 60688125 . T . PASS END=60688147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 60688148 . A . PASS END=60688164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr2 60688165 . A . PASS END=60688168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 60688169 . G . PASS END=60688174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 60688175 . G . PASS END=60688186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 60688187 . C . PASS END=60688187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 60688188 . T . PASS END=60688189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 60688190 . T . PASS END=60688208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 60688209 . G . LowGQ END=60688209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:9,0 chr2 60688210 . C . PASS END=60688231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:12,0 chr2 60688232 . G . PASS END=60688234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 60688235 . G . PASS END=60688296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:12,0 chr2 60688297 . T . PASS END=60688298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 60688299 . T . PASS END=60688344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr2 60688345 . C . PASS END=60688345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 60688346 . G . PASS END=60688354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:12,0 chr2 60688355 . C . PASS END=60688355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr2 60688356 . T . PASS END=60688358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 60688359 . T . PASS END=60688359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 60688360 . G . PASS END=60688360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 60688361 . G . PASS END=60688361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 60688362 . A . PASS END=60688364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr2 60688365 . G . PASS END=60688365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 60688366 . C . PASS END=60688369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 60688370 . G . PASS END=60688371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr2 60688372 . T . PASS END=60688374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 60688375 . A . PASS END=60688375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:10,0 chr2 60688376 . G . PASS END=60688376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 60688377 . T . PASS END=60688381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 60688382 . C . PASS END=60688383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:8,0 chr2 60688384 . T . PASS END=60688386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,25,255:10,0 chr2 60688387 . A . PASS END=60688388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 60688389 . C . PASS END=60688389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:10,0 chr2 60688390 . T . PASS END=60688392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr2 60688393 . G . PASS END=60688393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:10,0 chr2 60688394 . C . PASS END=60688398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 60688399 . T . PASS END=60688399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,304:0,6,255:10,0 chr2 60688400 . G . PASS END=60688400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 60688401 . C . PASS END=60688402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 60688403 . C . LowGQ END=60688403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,280:8,0,255:10,0 chr2 60688404 . T . PASS END=60688405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 60688406 . C . PASS END=60688406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr2 60688407 . A . PASS END=60688407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 60688408 . T . PASS END=60688409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,396:0,22,255:12,0 chr2 60688410 . A . PASS END=60688410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 60688411 . C . PASS END=60688411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,360:0,25,255:12,0 chr2 60688412 . G . PASS END=60688412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:12,0 chr2 60688413 . T . PASS END=60688413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:12,0 chr2 60688414 . C . PASS END=60688416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 60688417 . G . PASS END=60688417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,372:0,9,255:11,0 chr2 60688418 . C . PASS END=60688419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,354:0,25,255:12,0 chr2 60688420 . G . PASS END=60688424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:15,0 chr2 60688425 . C . PASS END=60688425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:14,0 chr2 60688426 . G . PASS END=60688426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 60688427 . G . PASS END=60688427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr2 60688428 . C . PASS END=60688430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:15,0 chr2 60688431 . T . PASS END=60688431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 60688432 . C . PASS END=60688438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,484:0,45,255:16,0 chr2 60688439 . C . PASS END=60688439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 60688440 . A . PASS END=60688440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 60688441 . C . PASS END=60688442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:22:0,65,807:0,65,255:26,0 chr2 60688443 . C . PASS END=60688454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:31,0 chr2 60688455 . C . PASS END=60688455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 60688456 . C . PASS END=60688616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:31:0,87,1135:0,91,255:40,0 chr2 60688617 . T . PASS END=60688617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1150:0,61,255:30,0 chr2 60688618 . T . PASS END=60688618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:31,0 chr2 60688619 . G . PASS END=60688619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1247:0,53,255:30,0 chr2 60688620 . G . PASS END=60688620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:30,0 chr2 60688621 . G . PASS END=60688621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:31,0 chr2 60688622 . G . PASS END=60688622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:29,0 chr2 60688623 . T . PASS END=60688627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1186:0,86,255:31,0 chr2 60688628 . C . PASS END=60688628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:30,0 chr2 60688629 . T . PASS END=60688629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,92,255:28,0 chr2 60688630 . C . PASS END=60688630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:27,0 chr2 60688631 . G . PASS END=60688641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1178:0,83,255:29,0 chr2 60688642 . T . PASS END=60688647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:29:0,62,1013:0,62,255:28,0 chr2 60688648 . C . PASS END=60688649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 60688650 . A . PASS END=60688654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,83,255:26,0 chr2 60688655 . C . PASS END=60688655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1071:0,49,255:24,0 chr2 60688656 . T . PASS END=60688662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:25,0 chr2 60688663 . C . PASS END=60688663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,884:0,37,255:21,0 chr2 60688664 . G . PASS END=60688668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1000:0,68,255:24,0 chr2 60688669 . T . PASS END=60688669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:21,0 chr2 60688670 . G . PASS END=60688674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:24,0 chr2 60688675 . T . PASS END=60688675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,937:0,42,255:23,0 chr2 60688676 . G . PASS END=60688677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 60688678 . C . PASS END=60688678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:24,0 chr2 60688679 . C . PASS END=60688682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:24,0 chr2 60688683 . A . PASS END=60688684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,829:0,48,255:22,0 chr2 60688685 . G . PASS END=60688691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,854:0,61,255:24,0 chr2 60688692 . G . PASS END=60688692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 60688693 . T . PASS END=60688701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:25:0,67,970:0,67,255:26,0 chr2 60688702 . C . PASS END=60688703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 60688704 . G . PASS END=60688706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr2 60688707 . G . PASS END=60688713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 60688714 . C . PASS END=60688741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1006:0,68,255:26,0 chr2 60688742 . C . PASS END=60688742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:24,0 chr2 60688743 . G . PASS END=60688772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,797:0,61,255:25,0 chr2 60688773 . T . PASS END=60688773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 60688774 . T . PASS END=60688774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 60688775 . C . PASS END=60688786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 60688787 . C . PASS END=60688800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1014:0,68,255:26,0 chr2 60688801 . G . PASS END=60688802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 60688803 . G . PASS END=60688803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:28,0 chr2 60688804 . T . PASS END=60688808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 60688809 . G . PASS END=60688813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 60688814 . G . PASS END=60688839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:34,0 chr2 60688840 . T . PASS END=60688840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1136:0,66,255:30,0 chr2 60688841 . C . PASS END=60688868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1156:0,83,255:31,0 chr2 60688869 . A . PASS END=60688869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:27,0 chr2 60688870 . C . PASS END=60688871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:29,0 chr2 60688872 . A . PASS END=60688872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1105:0,60,255:28,0 chr2 60688873 . G . PASS END=60688885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1074:0,90,255:30,0 chr2 60688886 . T . PASS END=60688886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr2 60688887 . T . PASS END=60688889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 60688890 . A . PASS END=60688890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 60688891 . A . PASS END=60688891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1070:0,90,255:30,0 chr2 60688892 . C . PASS END=60688892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 60688893 . G . PASS END=60688893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 60688894 . T . PASS END=60688894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,880:0,21,255:28,0 chr2 60688895 . C . PASS END=60688895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr2 60688896 . T . PASS END=60688896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr2 60688897 . T . PASS END=60688897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1062:0,41,255:30,0 chr2 60688898 . G . PASS END=60688898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1148:0,83,255:32,0 chr2 60688899 . C . PASS END=60688899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1015:0,35,255:30,0 chr2 60688900 . C . PASS END=60688900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:31,0 chr2 60688901 . G . PASS END=60688905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1158:0,85,255:33,0 chr2 60688906 . A . PASS END=60688906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1091:0,63,255:32,0 chr2 60688907 . C . PASS END=60688909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1180:0,85,255:33,0 chr2 60688910 . G . PASS END=60688910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1111:0,63,255:32,0 chr2 60688911 . C . PASS END=60688911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1121:0,85,255:30,0 chr2 60688912 . A . PASS END=60688912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1078:0,44,255:28,0 chr2 60688913 . T . PASS END=60688913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 60688914 . G . PASS END=60688914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1055:0,52,255:29,0 chr2 60688915 . A . PASS END=60688915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1172:0,61,255:31,0 chr2 60688916 . C . PASS END=60688916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1108:0,45,255:29,0 chr2 60688917 . T . PASS END=60688921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:34,0 chr2 60688922 . C . PASS END=60688922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1168:0,63,255:32,0 chr2 60688923 . T . PASS END=60688926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:33,0 chr2 60688927 . C . PASS END=60688927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:30,0 chr2 60688928 . C . LowGQ END=60688928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:0:36:0,0,939:19,0,255:27,1 chr2 60688929 . G . PASS END=60688930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1276:0,70,255:30,1 chr2 60688931 . G . PASS END=60688933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1350:0,108,255:33,0 chr2 60688934 . C . PASS END=60688934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1073:0,47,255:30,0 chr2 60688935 . T . PASS END=60688942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1189:0,88,255:33,0 chr2 60688943 . A . PASS END=60688943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1064:0,55,255:29,0 chr2 60688944 . G . PASS END=60688950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1150:0,83,255:32,0 chr2 60688951 . C . PASS END=60688951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1045:0,49,255:26,0 chr2 60688952 . G . PASS END=60688955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 60688956 . T . PASS END=60688956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,946:0,65,255:27,0 chr2 60688957 . G . PASS END=60688960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:29,0 chr2 60688961 . A . PASS END=60688962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,99,255:26,0 chr2 60688963 . G . PASS END=60688963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 60688964 . A . PASS END=60688966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr2 60688967 . G . PASS END=60688967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 60688968 . A . PASS END=60688968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,983:0,65,255:25,0 chr2 60688969 . G . PASS END=60689026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1115:0,86,255:30,0 chr2 60689027 . T . PASS END=60689028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 60689029 . G . PASS END=60689029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 60689030 . C . PASS END=60689030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 60689031 . A . PASS END=60689031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 60689032 . T . PASS END=60689051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr2 60689052 . G . PASS END=60689052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 60689053 . A . PASS END=60689080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr2 60689081 . C . PASS END=60689082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 60689083 . G . PASS END=60689085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 60689086 . C . PASS END=60689088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 60689089 . T . PASS END=60689089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 60689090 . A . PASS END=60689094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 60689095 . T . PASS END=60689137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,892:0,61,255:26,0 chr2 60689138 . C . PASS END=60689139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 60689140 . A . PASS END=60689141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 60689142 . C . PASS END=60689142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 60689143 . G . PASS END=60689149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 60689150 . C . PASS END=60689150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:18,0 chr2 60689151 . C . PASS END=60689156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 60689157 . A . PASS END=60689167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 60689168 . G . PASS END=60689170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr2 60689171 . A . PASS END=60689177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:19,0 chr2 60689178 . G . PASS END=60689182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 60689183 . G . PASS END=60689185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr2 60689186 . C . PASS END=60689187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 60689188 . T . PASS END=60689205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,607:0,46,255:19,0 chr2 60689206 . G . PASS END=60689206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 60689207 . C . PASS END=60689210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,55,255:19,0 chr2 60689211 . A . PASS END=60689218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:24:0,63,945:0,64,255:21,0 chr2 60689219 . G . PASS END=60689220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:46:21:0,46,684:0,46,255:19,0 chr2 60689221 . G . PASS END=60689221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 60689222 . G . PASS END=60689223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,836:0,53,255:21,0 chr2 60689224 . C . PASS END=60689224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 60689225 . C . PASS END=60689226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 60689227 . A . PASS END=60689255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,795:0,62,255:24,0 chr2 60689256 . G . PASS END=60689256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,748:0,45,255:22,0 chr2 60689257 . G . PASS END=60689257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:24,0 chr2 60689258 . G . PASS END=60689258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:22,0 chr2 60689259 . G . PASS END=60689272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,894:0,64,255:26,0 chr2 60689273 . G . PASS END=60689275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr2 60689276 . C . PASS END=60689276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr2 60689277 . C . PASS END=60689277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 60689278 . C . PASS END=60689278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 60689279 . T . PASS END=60689280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 60689281 . C . PASS END=60689281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 60689282 . T . PASS END=60689285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr2 60689286 . A . PASS END=60689286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 60689287 . G . PASS END=60689295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 60689296 . C . PASS END=60689296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 60689297 . C . PASS END=60689297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 60689298 . T . PASS END=60689298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 60689299 . C . PASS END=60689306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr2 60689307 . A . PASS END=60689308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1094:0,66,255:30,0 chr2 60689309 . T . PASS END=60689313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 60689314 . C . PASS END=60689314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 60689315 . T . PASS END=60689324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:32,0 chr2 60689325 . A . PASS END=60689325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:30,0 chr2 60689326 . G . PASS END=60689333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1185:0,80,255:32,0 chr2 60689334 . A . PASS END=60689334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1105:0,63,255:31,0 chr2 60689335 . A . PASS END=60689341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1133:0,82,255:33,0 chr2 60689342 . A . PASS END=60689342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1057:0,66,255:30,0 chr2 60689343 . T . PASS END=60689358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:35,0 chr2 60689359 . T . PASS END=60689359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:35,0 chr2 60689360 . C . PASS END=60689547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1184:0,83,255:40,0 chr2 60689548 . G . PASS END=60689559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,932:0,70,255:25,0 chr2 60695867 . A . PASS END=60695892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,482:0,42,255:19,0 chr2 60695893 . C . PASS END=60695916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr2 60695917 . G . PASS END=60695921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 60695922 . A . PASS END=60695939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr2 60695940 . G . PASS END=60695943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 60695944 . A . PASS END=60695944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:26,0 chr2 60695945 . G . PASS END=60695957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 60695958 . C . PASS END=60695968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 60705299 . C . PASS END=60705306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:35,0 chr2 60705307 . C . PASS END=60705307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:34,0 chr2 60705308 . C . PASS END=60705374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1256:0,84,255:40,0 chr2 60735841 . C . PASS END=60735845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr2 60735846 . G . PASS END=60735846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:16,0 chr2 60735847 . G . PASS END=60735848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:18,0 chr2 60735849 . G . PASS END=60735850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 60735851 . C . PASS END=60735854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 60735855 . G . PASS END=60735878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,884:0,63,255:26,0 chr2 60735879 . T . PASS END=60735917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,951:0,81,255:29,0 chr2 60735918 . A . PASS END=60735918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr2 60735919 . C . PASS END=60735921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 60735922 . G . PASS END=60735959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,828:0,72,255:26,0 chr2 60743562 . C . PASS END=60743613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1305:0,95,255:38,0 chr2 60750011 . T . PASS END=60750018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,200,255:40,0 chr2 60765512 . T . PASS END=60765678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:31:0,81,1141:0,87,255:40,0 chr2 60765679 . T . PASS END=60765679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 60765680 . T . PASS END=60765684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1133:0,93,255:33,0 chr2 60769017 . T . PASS END=60769060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,120,1800:0,128,255:40,0 chr2 60771453 . T . PASS END=60771477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1200:0,83,255:38,0 chr2 60771478 . T . PASS END=60771478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr2 60771479 . C . PASS END=60771500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1356:0,98,255:37,0 chr2 60771501 . A . PASS END=60771501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:32,0 chr2 60771502 . T . PASS END=60771506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,95,255:31,0 chr2 60771507 . A . PASS END=60771507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:30,0 chr2 60771508 . T . PASS END=60771526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr2 60773098 . T . PASS END=60773291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:40:0,87,1305:0,99,255:40,0 chr2 60773292 . T . PASS END=60773292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:27,0 chr2 60773293 . G . PASS END=60773293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 60773294 . T . PASS END=60773294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr2 60773295 . G . PASS END=60773305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:32,0 chr2 60773306 . A . PASS END=60773306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 60773307 . T . PASS END=60773312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:31,0 chr2 60773313 . T . PASS END=60773313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 60773314 . G . PASS END=60773327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 60773328 . A . PASS END=60773328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 60773329 . G . PASS END=60773340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:32,0 chr2 60773341 . C . PASS END=60773342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 60773343 . G . PASS END=60773345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 60773346 . C . PASS END=60773349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:34:0,78,1170:0,102,255:26,0 chr2 60773350 . G . PASS END=60773362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,86,255:29,0 chr2 60773363 . T . PASS END=60773363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 60773364 . G . PASS END=60773365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 60773366 . T . PASS END=60773377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,1000:0,68,255:26,0 chr2 60773378 . G . PASS END=60773385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:28,0 chr2 60773386 . C . PASS END=60773386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 60773387 . G . PASS END=60773392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 60773393 . T . PASS END=60773394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 60773395 . G . PASS END=60773395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:25,0 chr2 60773396 . T . PASS END=60773408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr2 60773409 . C . PASS END=60773409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 60773410 . T . PASS END=60773426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,884:0,61,255:24,0 chr2 60773427 . G . PASS END=60773427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 60773428 . A . PASS END=60773436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 60778003 . C . PASS END=60778019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,115,1755:0,115,255:40,0 chr2 60778020 . T . PASS END=60778020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1638:0,78,255:38,0 chr2 60778021 . C . PASS END=60778040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:40:0,84,1382:0,84,255:40,0 chr2 60778041 . C . PASS END=60778041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1325:0,70,255:35,0 chr2 60778042 . T . PASS END=60778051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1230:0,81,255:37,0 chr2 60780350 . C . PASS END=60780353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr2 60780354 . A . PASS END=60780354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 60780355 . G . PASS END=60780355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 60780356 . A . LowGQ END=60780356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,263:0,0,255:9,0 chr2 60780357 . A . PASS END=60780357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 60780358 . T . PASS END=60780381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:11,0 chr2 60780382 . T . PASS END=60780382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,274:0,16,255:10,0 chr2 60780383 . T . PASS END=60780401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr2 60780402 . A . PASS END=60780402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 60780403 . C . PASS END=60780403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 60780404 . A . PASS END=60780405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 60983614 . A . PASS END=60983630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1125:0,82,255:32,0 chr2 60987269 . A . PASS END=60987430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:41:0,107,1496:0,107,255:40,1 chr2 60988876 . G . PASS END=60988942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:82:0,120,1800:0,220,255:40,0 chr2 60995605 . A . PASS END=60995686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,102,1530:0,119,255:40,0 chr2 60995916 . G . PASS END=60996025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:43:0,113,1535:0,113,255:40,0 chr2 60997593 . G . PASS END=60997646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:88:0,120,1800:0,250,255:40,0 chr2 60998654 . A . PASS END=60998656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,870:0,64,255:25,0 chr2 60998657 . G . PASS END=60998765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:32:0,87,1197:0,95,255:40,0 chr2 61002169 . G . PASS END=61002258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,120,1800:0,130,255:40,0 chr2 61006772 . G . PASS END=61006910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:31:0,93,1156:0,93,255:40,0 chr2 61007842 . G . PASS END=61007844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:42:0,90,1492:0,90,255:40,0 chr2 61007845 . A . PASS END=61007845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:41:43:0,41,1401:0,41,255:39,0 chr2 61007846 . T . PASS END=61007914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,113,1537:0,113,255:40,0 chr2 61009020 . G . PASS END=61009140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:54:0,120,1800:0,146,255:40,0 chr2 61009821 . G . LowGQ END=61009821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,9:62:0:62:0,0,1601:52,0,255:40,0 chr2 61009822 . T . PASS END=61009822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:66:63:0,66,1676:0,66,255:40,0 chr2 61009823 . C . LowGQ END=61009823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,14:63:0:63:0,0,1483:43,0,255:40,0 chr2 61009824 . T . PASS END=61009824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:79:63:0,79,2078:0,79,255:40,0 chr2 61009825 . T . PASS END=61009825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,4:68:94:68:0,94,2272:0,94,255:40,0 chr2 61009826 . G . PASS END=61009826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,6:67:35:67:0,35,2011:0,35,255:40,0 chr2 61009827 . C . PASS END=61009834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,5:72:99:68:0,107,1800:0,107,255:40,0 chr2 61009835 . G . PASS END=61009835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,7:72:77:72:0,77,2127:0,77,255:40,0 chr2 61009836 . A . PASS END=61009837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,3:73:99:73:0,103,1800:0,103,255:40,0 chr2 61009838 . G . PASS END=61009838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,6:73:61:73:0,61,2163:0,61,255:40,0 chr2 61009839 . A . PASS END=61009843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:73:0,120,1800:0,164,255:40,0 chr2 61009844 . C . PASS END=61009844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,7:74:39:74:0,39,2170:0,39,255:40,0 chr2 61009845 . T . PASS END=61009854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,3:75:99:75:0,120,1800:0,120,255:40,0 chr2 61009855 . G . PASS END=61009855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,6:76:62:76:0,62,2390:0,62,255:40,0 chr2 61009856 . T . PASS END=61009856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,6:76:99:76:0,107,2508:0,107,255:40,0 chr2 61009857 . C . PASS END=61009857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,5:76:79:76:0,79,2423:0,79,255:40,0 chr2 61009858 . A . PASS END=61009858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,5:76:99:76:0,120,1800:0,131,255:40,0 chr2 61009859 . G . PASS END=61009859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,6:76:62:76:0,62,2338:0,62,255:40,0 chr2 61009860 . A . PASS END=61009863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,3:76:86:76:0,86,1800:0,86,255:40,0 chr2 61009864 . G . PASS END=61009870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,3:76:99:75:0,117,1800:0,117,255:40,0 chr2 61009871 . C . PASS END=61009871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,6:76:48:76:0,48,2398:0,48,255:40,0 chr2 61009872 . T . PASS END=61009873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,6:77:81:74:0,81,1800:0,81,255:40,0 chr2 61009874 . C . PASS END=61009874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,7:74:48:74:0,48,2347:0,48,255:40,0 chr2 61009875 . T . PASS END=61009881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,4:72:99:70:0,120,1800:0,122,255:40,0 chr2 61009882 . A . PASS END=61009882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,7:68:23:68:0,23,2049:0,23,255:40,0 chr2 61009883 . C . PASS END=61009899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,4:65:99:63:0,106,1800:0,106,255:40,0 chr2 61009900 . G . PASS END=61009900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:64:63:0,64,2019:0,64,255:38,0 chr2 61009901 . T . PASS END=61009903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,3:65:99:65:0,101,1710:0,101,255:39,0 chr2 61009904 . A . PASS END=61009905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,6:64:76:64:0,76,1895:0,76,255:37,0 chr2 61010291 . A . PASS END=61010344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:66:0,120,1800:0,198,255:40,0 chr2 61014082 . G . PASS END=61014201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,113,1521:0,113,255:40,0 chr2 61014646 . C . PASS END=61014755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:56:0,120,1800:0,149,255:40,0 chr2 61018896 . T . PASS END=61019017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:65:0,120,1800:0,171,255:40,0 chr2 61019264 . C . PASS END=61019408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:33:0,84,1249:0,89,255:40,0 chr2 61019409 . T . PASS END=61019409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 61019410 . A . PASS END=61019411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 61019412 . G . PASS END=61019424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:25,0 chr2 61020762 . G . PASS END=61020850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,113,1423:0,113,255:40,0 chr2 61021106 . A . PASS END=61021120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr2 61021121 . T . PASS END=61021121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 61021122 . A . PASS END=61021122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 61021123 . A . PASS END=61021133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,720:0,47,255:19,0 chr2 61021134 . A . PASS END=61021134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:20,0 chr2 61021135 . C . PASS END=61021135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 61021136 . C . PASS END=61021136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 61021137 . C . PASS END=61021137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 61021138 . C . PASS END=61021143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,892:0,72,255:24,0 chr2 61021144 . G . PASS END=61021145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 61021146 . G . PASS END=61021157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1022:0,68,255:26,0 chr2 61021158 . T . PASS END=61021162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 61021163 . T . PASS END=61021163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 61021164 . A . PASS END=61021175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:30,0 chr2 61021176 . T . PASS END=61021176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 61021177 . G . PASS END=61021177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 61021178 . T . PASS END=61021178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 61021179 . C . PASS END=61021187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 61021188 . A . PASS END=61021192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 61021193 . C . PASS END=61021229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1154:0,83,255:31,0 chr2 61021230 . G . PASS END=61021230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 61021231 . A . PASS END=61021236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:31,0 chr2 61021237 . A . PASS END=61021237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 61021238 . T . PASS END=61021245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 61021246 . A . PASS END=61021249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1041:0,76,255:26,0 chr2 61021250 . C . PASS END=61021254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 61021255 . A . PASS END=61021255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 61021256 . C . PASS END=61021256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 61021257 . T . PASS END=61021257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 61021258 . G . PASS END=61021265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr2 61021266 . T . PASS END=61021287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,67,255:26,0 chr2 61021288 . A . PASS END=61021311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 61021312 . A . PASS END=61021320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 61021321 . G . PASS END=61021321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 61021322 . A . PASS END=61021325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:16,0 chr2 61021326 . G . PASS END=61021326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 61021845 . T . PASS END=61021910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:71:0,120,1800:0,181,255:40,0 chr2 61022099 . G . PASS END=61022155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,187,255:40,0 chr2 61024197 . A . PASS END=61024295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,136,255:40,0 chr2 61108976 . A . PASS END=61108980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 61108981 . C . PASS END=61108981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 61108982 . T . PASS END=61108985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 61118818 . G . PASS END=61118958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:87:38:0,87,1285:0,87,255:40,0 chr2 61118959 . A . PASS END=61118960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,105,255:26,0 chr2 61121532 . A . PASS END=61121535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1111:0,93,255:34,0 chr2 61121536 . T . PASS END=61121536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr2 61121537 . G . PASS END=61121538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1332:0,92,255:36,0 chr2 61121539 . A . PASS END=61121539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1175:0,69,255:35,0 chr2 61121540 . C . PASS END=61121680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:38:0,113,1421:0,113,255:40,0 chr2 61126105 . A . PASS END=61126141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:69:0,120,1800:0,166,255:40,0 chr2 61128012 . A . PASS END=61128019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:79:0,120,1800:0,227,255:40,0 chr2 61128127 . T . PASS END=61128218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:96:56:0,96,1440:0,146,255:40,0 chr2 61144012 . T . PASS END=61144152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,108,1620:0,134,255:40,0 chr2 61145326 . G . PASS END=61145400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:43:0,113,1559:0,113,255:40,0 chr2 61145401 . T . PASS END=61145401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,8:72:61:72:0,61,2072:0,61,255:40,0 chr2 61145402 . A . PASS END=61145430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,144,255:40,0 chr2 61145529 . A . PASS END=61145549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,182,255:40,0 chr2 61145550 . T . PASS END=61145741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:36:0,84,1260:0,87,255:40,0 chr2 61147176 . A . PASS END=61147244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,101,1412:0,101,255:40,0 chr2 61147709 . T . PASS END=61147777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:95:49:0,95,1737:0,95,255:40,0 chr2 61148891 . C . PASS END=61148891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 61148898 . A . PASS END=61148898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 61148899 . A . PASS END=61148899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 61148900 . C . PASS END=61148904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 61148905 . C . PASS END=61148905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 61148906 . T . PASS END=61148908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 61148909 . T . PASS END=61148910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 61148911 . T . PASS END=61148911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 61148912 . T . PASS END=61148918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 61148919 . A . PASS END=61148921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 61148922 . C . PASS END=61148922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr2 61148923 . A . PASS END=61148924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,884:0,69,255:26,0 chr2 61148925 . T . PASS END=61148941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,908:0,81,255:30,0 chr2 61148942 . A . PASS END=61148942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 61148943 . C . PASS END=61148990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1247:0,89,255:34,0 chr2 61148991 . T . PASS END=61148991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1031:0,52,255:31,0 chr2 61148992 . C . PASS END=61149039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1236:0,89,255:36,0 chr2 61149040 . A . PASS END=61149040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:33,0 chr2 61149041 . A . PASS END=61149100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:83:34:0,83,1175:0,83,255:40,0 chr2 61149101 . T . PASS END=61149101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:29,0 chr2 61149102 . T . PASS END=61149102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:29,0 chr2 61149103 . T . PASS END=61149103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr2 61149104 . T . PASS END=61149121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,985:0,84,255:29,0 chr2 61149122 . T . PASS END=61149122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr2 61149123 . C . PASS END=61149126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 61149127 . T . PASS END=61149127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr2 61149128 . T . PASS END=61149129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 61149130 . G . PASS END=61149130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 61149131 . C . PASS END=61149191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:29:0,84,1066:0,86,255:38,0 chr2 61149192 . G . PASS END=61149192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:31,0 chr2 61149193 . C . PASS END=61149208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:37:0,83,1343:0,83,255:35,0 chr2 61149209 . G . PASS END=61149209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:32,0 chr2 61149210 . A . PASS END=61149252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1395:0,101,255:40,0 chr2 61149253 . T . PASS END=61149253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1398:0,77,255:39,0 chr2 61149254 . T . PASS END=61149670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:42:0,86,1501:0,86,255:40,0 chr2 61169530 . C . PASS END=61169568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:62:0,120,1800:0,146,255:40,0 chr2 61172144 . C . PASS END=61172243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,105,1443:0,113,255:40,0 chr2 61175178 . G . PASS END=61175179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr2 61175180 . G . PASS END=61175180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 61175181 . C . PASS END=61175189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 61175190 . G . PASS END=61175190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 61175191 . T . PASS END=61175212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,807:0,69,255:26,0 chr2 61175213 . G . PASS END=61175223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:30,0 chr2 61175224 . C . PASS END=61175224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 61175225 . G . PASS END=61175274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1038:0,80,255:33,0 chr2 61175275 . T . PASS END=61175280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 61175281 . G . PASS END=61175306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr2 61175307 . T . PASS END=61175311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 61175312 . T C, 116.21 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,868,69,868:255,69,0:0,0:1.1621e+02,6.6214e+01,1.0354e-06,4.5000e+02,1.0098e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,15:0,0,8,15 chr2 61175313 . T . PASS END=61175320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:17,0 chr2 61180132 . C . PASS END=61180249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:49:0,120,1800:0,133,255:40,0 chr2 61181068 . C . PASS END=61181123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,104,1793:0,104,255:40,0 chr2 61181217 . C . PASS END=61181293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:45:0,83,1627:0,83,255:40,0 chr2 61182153 . C . PASS END=61182209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:62:0,120,1800:0,143,255:40,0 chr2 61187527 . T . PASS END=61187652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:60:0,120,1800:0,149,255:40,1 chr2 61188598 . C . PASS END=61188683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,126,255:40,0 chr2 61189961 . T . PASS END=61190025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:73:0,120,1800:0,206,255:40,0 chr2 61192193 . C . PASS END=61192238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:84:0,120,1800:0,235,255:40,0 chr2 61192558 . A . PASS END=61192619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,120,1800:0,128,255:40,0 chr2 61194637 . C . PASS END=61194734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1260:0,81,255:40,0 chr2 61194735 . A . PASS END=61194748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr2 61198658 . C . PASS END=61198692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,105,1575:0,106,255:40,0 chr2 61233692 . C . PASS END=61233778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,129,255:40,0 chr2 61235896 . C . PASS END=61235909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,466:0,42,255:14,0 chr2 61235910 . C . PASS END=61235920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 61235921 . A . PASS END=61235921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 61235922 . A . PASS END=61235922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 61235923 . T . PASS END=61235923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 61235924 . T . PASS END=61235944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,474:0,42,255:19,0 chr2 61235945 . A . PASS END=61235962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:22,0 chr2 61235963 . T . PASS END=61235963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,601:0,32,255:20,0 chr2 61235964 . T . PASS END=61235965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 61235966 . G . PASS END=61235967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 61235968 . G . PASS END=61235969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 61235970 . T . PASS END=61235970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr2 61235971 . C . PASS END=61235993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,823:0,62,255:26,0 chr2 61235994 . G . PASS END=61236004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1172:0,96,255:37,0 chr2 61236005 . A . PASS END=61236005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1061:0,53,255:36,0 chr2 61236006 . T . PASS END=61236020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:40:0,90,1409:0,90,255:40,0 chr2 61236021 . T . PASS END=61236021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1309:0,70,255:37,0 chr2 61236022 . T . PASS END=61236150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:38:0,87,1305:0,109,255:40,0 chr2 61237961 . T . PASS END=61238023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,158,255:40,0 chr2 61238900 . C . PASS END=61238908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,106,1243:0,106,255:40,0 chr2 61238909 . A . PASS END=61238909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1281:0,76,255:39,0 chr2 61238910 . A . PASS END=61238917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,102,1529:0,102,255:40,0 chr2 61238918 . A . PASS END=61238951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:47:0,81,1593:0,81,255:40,1 chr2 61238952 . A . PASS END=61238952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:23:55:0,23,1564:0,23,255:40,0 chr2 61238953 . T . PASS END=61238953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 61238954 . A . PASS END=61238954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:29:55:0,29,1633:0,29,255:40,0 chr2 61238955 . C . PASS END=61239025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:34:0,85,1217:0,85,255:40,0 chr2 61244827 . C . PASS END=61244827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 61244883 . G . PASS END=61244883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 61244888 . G . PASS END=61244888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 61244895 . A . PASS END=61244971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:40:0,81,1429:0,81,255:40,0 chr2 61244972 . G . PASS END=61244972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:33,0 chr2 61244973 . G . PASS END=61244986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,101,1434:0,101,255:36,0 chr2 61245297 . A . PASS END=61245303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1304:0,80,255:37,0 chr2 61245304 . T . PASS END=61245304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:36,0 chr2 61245305 . C . PASS END=61245396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:38:0,96,1293:0,96,255:40,0 chr2 61258554 . A . PASS END=61258554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,526:0,24,255:19,0 chr2 61258555 . T . PASS END=61258555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 61258556 . C . PASS END=61258564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,723:0,63,255:25,0 chr2 61258565 . T . PASS END=61258565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 61258566 . G . PASS END=61258572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,933:0,75,255:26,0 chr2 61258573 . A . PASS END=61258589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1020:0,84,255:31,0 chr2 61258590 . T . PASS END=61258591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 61258592 . G . PASS END=61258918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1172:0,81,255:40,0 chr2 61258919 . C . PASS END=61258919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1208:0,58,255:28,0 chr2 61258920 . T . PASS END=61258920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:28,0 chr2 61258921 . G . PASS END=61259231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:31:0,83,1179:0,83,255:40,0 chr2 61259232 . C . PASS END=61259247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:26,0 chr2 61259248 . G . PASS END=61259248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 61272861 . A . PASS END=61272986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:34:0,96,1440:0,102,255:40,0 chr2 61275607 . A . PASS END=61275905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:34:0,102,1256:0,102,255:40,0 chr2 61275995 . A . PASS END=61275995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr2 61276075 . C . PASS END=61276075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 61276121 . T . PASS END=61276121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 61276138 . G . PASS END=61276138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 61276168 . A . PASS END=61276168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr2 61276203 . G . PASS END=61276203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 61276223 . G . PASS END=61276223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 61276262 . T . PASS END=61276262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 61276288 . A . PASS END=61276288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 61276332 . A . LowGQ END=61276332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,8:29:0:29:0,0,474:185,0,255:20,10 chr2 61276341 . T . PASS END=61276341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 61276351 . A . PASS END=61276351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 61276581 . A . PASS END=61276581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 61277079 . A . PASS END=61277079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 61277188 . C . PASS END=61277188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 61277554 . C . PASS END=61277554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr2 61277559 . T . PASS END=61277559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr2 61278134 . C . PASS END=61278134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:30,0 chr2 61278139 . A . PASS END=61278139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 61278141 . A . PASS END=61278141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1411:0,104,255:38,0 chr2 61278201 . G . PASS END=61278201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 61278261 . T . PASS END=61278261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 61278273 . T . PASS END=61278273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 61278327 . T . PASS END=61278327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,115,1545:0,115,255:40,0 chr2 61278400 . A . PASS END=61278400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 61278442 . T . PASS END=61278442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 61278455 . G . PASS END=61278455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 61278486 . A . PASS END=61278486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,211,255:40,0 chr2 61278547 . T . PASS END=61278547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr2 61278654 . C . PASS END=61278654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 61278823 . A . PASS END=61278823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1255:0,86,255:32,0 chr2 61278892 . T . PASS END=61278892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 61278943 . A . PASS END=61278943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 61278945 . A . PASS END=61278945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 61278955 . C . PASS END=61278955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 61279011 . T . PASS END=61279011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr2 61279031 . A . PASS END=61279031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 61279121 . C . PASS END=61279121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 61297486 . A . PASS END=61297635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:46:0,102,1530:0,121,255:40,0 chr2 61298741 . T . PASS END=61298917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:81:33:0,81,1215:0,99,255:40,0 chr2 61298918 . T . PASS END=61298922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 61298923 . A . PASS END=61298924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 61298925 . C . PASS END=61298927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 61300593 . G . PASS END=61300602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:37:0,93,1266:0,93,255:40,0 chr2 61300603 . T . PASS END=61300686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,126,255:40,0 chr2 61304055 . G . PASS END=61304061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,962:0,67,255:26,0 chr2 61304062 . A . PASS END=61304065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 61304066 . T . PASS END=61304066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 61304067 . G . PASS END=61304071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr2 61304072 . A . PASS END=61304072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1032:0,57,255:30,0 chr2 61304073 . T . PASS END=61304153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1218:0,81,255:40,0 chr2 61304154 . T . PASS END=61304154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr2 61304155 . G . PASS END=61304253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:36:0,85,1296:0,85,255:40,0 chr2 61304254 . A . PASS END=61304254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:30,0 chr2 61304255 . A . PASS END=61304267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:30,0 chr2 61304268 . T . PASS END=61304292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,984:0,68,255:26,0 chr2 61304293 . G . PASS END=61304293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 61308587 . A . PASS END=61308620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:113:0,120,1800:0,222,255:40,0 chr2 61308621 . G . PASS END=61308645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:108:0,120,1800:0,255,255:40,0 chr2 61310289 . G . PASS END=61310449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:34:0,93,1218:0,94,255:40,0 chr2 61315294 . C . PASS END=61315380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:59:0,120,1800:0,166,255:40,0 chr2 61315493 . A . PASS END=61315603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:65:0,120,1800:0,179,255:40,0 chr2 61319599 . A . PASS END=61319685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,104,1410:0,104,255:40,0 chr2 61319686 . A . PASS END=61319722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:38:0,84,1380:0,84,255:40,0 chr2 61324835 . G . PASS END=61324844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,809:0,72,255:24,0 chr2 61324845 . G . PASS END=61324970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1078:0,84,255:40,0 chr2 61324971 . C . PASS END=61324987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,990:0,71,255:26,0 chr2 61330988 . G . PASS END=61331133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:33:0,93,1395:0,99,255:40,0 chr2 61333698 . T . PASS END=61333797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:38:0,98,1357:0,98,255:40,0 chr2 61335452 . T . PASS END=61335484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,170,255:40,0 chr2 61336332 . A . PASS END=61336431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,120,1800:0,129,255:40,0 chr2 61340905 . G . PASS END=61340921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,197,255:40,0 chr2 61343114 . G . PASS END=61343205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,154,255:40,0 chr2 61344492 . T . PASS END=61344520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,160,255:40,0 chr2 61344602 . T . PASS END=61344675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:50:0,120,1800:0,126,255:40,0 chr2 61345163 . A . PASS END=61345251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,122,255:40,0 chr2 61348320 . T . PASS END=61348411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:95:32:0,95,963:0,95,255:40,0 chr2 61349261 . G . PASS END=61349297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,175,255:40,0 chr2 61361272 . A . PASS END=61361366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1025:0,89,255:40,0 chr2 61361367 . A . PASS END=61361367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 61385013 . A . PASS END=61385022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr2 61385023 . G . PASS END=61385037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr2 61385038 . T . PASS END=61385038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 61385039 . T . PASS END=61385059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1180:0,83,255:33,0 chr2 61385060 . G . PASS END=61385099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1228:0,92,255:36,0 chr2 61385100 . G A, 147.11 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,35,0:1.000,0.000:35:0,15,0:0,20,0:97:185,100,0,285,285,285:255,105,0:0,0:1.4711e+02,9.7106e+01,0.0000e+00,2.8188e+02,3.1665e+02,2.8489e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,25:0,0,20,15:61385100 chr2 61385101 . A . PASS END=61385104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:30,0 chr2 61385105 . G C, 142.24 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,32,0:1.000,0.000:32:0,13,0:0,19,0:92:180,95,0,280,280,280:255,96,0:0,0:1.4224e+02,9.2236e+01,0.0000e+00,2.7701e+02,3.1178e+02,2.8002e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,10,22:0,0,19,13:61385100 chr2 61385106 . A . PASS END=61385135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1103:0,84,255:31,0 chr2 61385136 . T . PASS END=61385145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 61385146 . A . PASS END=61385147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:21,0 chr2 61389629 . A . PASS END=61389699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:66:0,120,1800:0,198,255:40,0 chr2 61389700 . C . PASS END=61389736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,3:86:99:76:0,120,1800:0,189,255:40,0 chr2 61389737 . T G, 269.25 PASS DP=74;MQ=248.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,74,0:1.000,0.000:74:0,31,0:0,43,0:219:307,222,0,2800,222,2800:255,190,0:1,0:2.6925e+02,2.1925e+02,0.0000e+00,4.5000e+02,2.5402e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,43,31:0,0,38,36 chr2 61389738 . A . PASS END=61389744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,156,255:40,0 chr2 61389977 . T . PASS END=61389978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1560:0,93,255:40,0 chr2 61389979 . T . PASS END=61389979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1476:0,77,255:40,0 chr2 61389980 . C . PASS END=61390108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:86:44:0,86,1537:0,86,255:40,0 chr2 61390187 . G . PASS END=61390367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:37:0,87,1236:0,87,255:40,0 chr2 61391489 . G . PASS END=61391662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:44:0,117,1600:0,118,255:40,0 chr2 61404674 . A . PASS END=61404675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 61404676 . G . PASS END=61404693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr2 61404694 . G . PASS END=61404707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,233:0,21,233:9,0 chr2 61404708 . T . PASS END=61404708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 61404709 . C . PASS END=61404709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 61404710 . G . PASS END=61404710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 61404711 . T . PASS END=61404716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 61404717 . A . PASS END=61404717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 61404718 . G . PASS END=61404727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 61404728 . G . PASS END=61404728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr2 61404729 . G . PASS END=61404729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 61404730 . G . PASS END=61404730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 61404731 . A . PASS END=61404757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 61404758 . G . PASS END=61404758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 61404759 . G . PASS END=61404773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,255:8,0 chr2 61404774 . C . PASS END=61404774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr2 61404775 . T . PASS END=61404776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 61404777 . C . PASS END=61404779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 61404780 . G . PASS END=61404785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,221:0,24,221:9,0 chr2 61404786 . G . PASS END=61404789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr2 61404790 . A . PASS END=61404790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 61404791 . G . PASS END=61404792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 61404793 . G . PASS END=61404794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr2 61404795 . C . PASS END=61404804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,376:0,36,255:12,0 chr2 61404805 . G . PASS END=61404807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr2 61404808 . C . PASS END=61404810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 61404811 . G . PASS END=61404813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 61404814 . C . PASS END=61404815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 61404816 . G . PASS END=61404816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:13,0 chr2 61404817 . C . PASS END=61404827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr2 61404828 . G . PASS END=61404836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,908:0,61,255:25,0 chr2 61404837 . C . PASS END=61404837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 61404838 . G . PASS END=61404851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,923:0,75,255:25,0 chr2 61404852 . T . PASS END=61404854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:45:25:0,45,831:0,45,255:23,0 chr2 61404855 . G . PASS END=61404871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:25,0 chr2 61404872 . A . PASS END=61404872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr2 61404873 . G . PASS END=61404878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,864:0,61,255:26,0 chr2 61404879 . G . PASS END=61404879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 61404880 . G . PASS END=61404883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 61404884 . C . PASS END=61404884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr2 61404885 . A . PASS END=61404893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:26,0 chr2 61404894 . C . PASS END=61404917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,895:0,62,255:26,0 chr2 61404918 . T . PASS END=61404918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 61404919 . C . PASS END=61404921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 61404922 . T . PASS END=61404924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr2 61406116 . G . PASS END=61406122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:32,0 chr2 61406123 . C . PASS END=61406123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:30,0 chr2 61406124 . G . PASS END=61406229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1143:0,80,255:37,0 chr2 61406230 . A . PASS END=61406230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:31,0 chr2 61406231 . G . PASS END=61406251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1006:0,80,255:32,0 chr2 61406252 . C . PASS END=61406254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1116:0,77,255:26,0 chr2 61406255 . A . PASS END=61406255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:25,0 chr2 61406256 . A . PASS END=61406264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr2 61406265 . T . PASS END=61406265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:24,0 chr2 61406266 . G . PASS END=61406270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 61406271 . T . PASS END=61406271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 61406272 . C . PASS END=61406276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 61406277 . A . PASS END=61406283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 61406284 . G . PASS END=61406306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr2 61408455 . G . PASS END=61408544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:43:0,113,1604:0,113,255:40,0 chr2 61410682 . G . PASS END=61410787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,90,255:40,0 chr2 61410788 . C . PASS END=61410792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 61410793 . G . PASS END=61410797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 61411847 . A . PASS END=61411935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,153,255:40,0 chr2 61412637 . G . PASS END=61412753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1189:0,81,255:40,0 chr2 61413115 . T . PASS END=61413216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:62:0,120,1800:0,181,255:40,0 chr2 61413476 . A . PASS END=61413632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:61:0,106,1800:0,106,255:40,0 chr2 61413752 . A . PASS END=61413760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,125,255:40,0 chr2 61413761 . C . PASS END=61413921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:87:31:0,87,1186:0,93,255:40,0 chr2 61415044 . G . PASS END=61415090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:74:0,120,1800:0,185,255:40,0 chr2 61415237 . T . PASS END=61415454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:38:0,82,1197:0,82,255:40,0 chr2 61415455 . C . PASS END=61415491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:40:0,107,1510:0,107,255:40,0 chr2 61415492 . A G, 169.01 PASS DP=41;MQ=176.33;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,20,0:0,21,0:119:207,122,0,1486,122,1486:255,123,0:0,0:1.6901e+02,1.1901e+02,0.0000e+00,4.5000e+02,1.5378e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,23:0,0,19,22 chr2 61415493 . G . PASS END=61415529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,105,1598:0,105,255:40,0 chr2 61415530 . A . PASS END=61415836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,91,255:40,0 chr2 61415837 . T . PASS END=61415844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,80,255:26,0 chr2 61416045 . C . PASS END=61416047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 61416048 . T . PASS END=61416048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 61416049 . A . PASS END=61416051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 61416052 . T . PASS END=61416052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 61416053 . T . PASS END=61416057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1009:0,87,255:29,0 chr2 61416058 . T . PASS END=61416058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 61416059 . T . PASS END=61416062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1060:0,93,255:31,0 chr2 61416063 . T . PASS END=61416063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 61416064 . G . PASS END=61416066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 61416067 . T . PASS END=61416067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 61416068 . T . PASS END=61416159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1083:0,83,255:40,0 chr2 61416160 . T . PASS END=61416160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1086:0,69,255:26,0 chr2 61416161 . T . PASS END=61416163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 61416164 . G . PASS END=61416185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr2 61416186 . A . PASS END=61416193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,66,255:19,0 chr2 61416194 . G . PASS END=61416204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:15:0,36,540:0,45,255:13,0 chr2 61417406 . C . PASS END=61417549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,105,1575:0,141,255:40,0 chr2 61417653 . C . PASS END=61417654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 61417655 . T . PASS END=61417793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:75:0,120,1800:0,192,255:40,0 chr2 61420036 . C . PASS END=61420115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:37:0,95,1355:0,95,255:40,0 chr2 61430275 . T . PASS END=61430398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,152,255:40,0 chr2 61431391 . C . PASS END=61431396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:26,0 chr2 61431397 . G . PASS END=61431399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 61431400 . T . PASS END=61431400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 61431401 . T . PASS END=61431515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1197:0,84,255:40,0 chr2 61431632 . T . PASS END=61431736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:36:0,93,1440:0,93,255:40,0 chr2 61433152 . C . PASS END=61433259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:61:0,120,1800:0,156,255:40,0 chr2 61433895 . C . PASS END=61434021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:43:0,93,1395:0,101,255:40,0 chr2 61436034 . C . PASS END=61436112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:89:0,120,1800:0,255,255:40,0 chr2 61438907 . C . PASS END=61438907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:28,0 chr2 61438908 . T . PASS END=61439064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:30:0,86,1094:0,86,255:40,0 chr2 61441195 . T . PASS END=61441195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 61441196 . C . PASS END=61441196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 61441197 . C . PASS END=61441197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr2 61441198 . A . PASS END=61441198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 61441199 . G . PASS END=61441199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 61441200 . G . PASS END=61441201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr2 61441202 . T . PASS END=61441202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr2 61441203 . A . PASS END=61441216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,978:0,75,255:26,0 chr2 61441217 . G . PASS END=61441232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,825:0,84,255:30,0 chr2 61441233 . A . PASS END=61441233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1014:0,76,255:29,0 chr2 61441234 . G . PASS END=61441256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1186:0,93,255:31,0 chr2 61441257 . A . PASS END=61441257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:29,0 chr2 61441258 . A . PASS END=61441641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:31:0,80,1139:0,80,255:40,0 chr2 61441642 . A . PASS END=61441642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:33,0 chr2 61441643 . G . PASS END=61441697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1240:0,90,255:40,0 chr2 61441698 . C . PASS END=61441698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr2 61441699 . C . PASS END=61441829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1144:0,84,255:40,0 chr2 61447445 . A . PASS END=61447592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:36:0,99,1485:0,108,255:40,0 chr2 61448637 . C . PASS END=61448741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,108,1620:0,114,255:40,0 chr2 61449754 . C . PASS END=61449798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:90:0,120,1800:0,206,255:40,0 chr2 61450195 . A . PASS END=61450299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:36:0,108,1337:0,108,255:40,0 chr2 61450383 . C . PASS END=61450431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,142,255:40,0 chr2 61454198 . T . PASS END=61454198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 61454199 . C . PASS END=61454201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:29,0 chr2 61454202 . C . PASS END=61454202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 61454203 . T . PASS END=61454206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 61454207 . T . PASS END=61454207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 61454208 . G . PASS END=61454347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1260:0,81,255:40,0 chr2 61454348 . T . PASS END=61454353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:23,0 chr2 61455780 . A . PASS END=61455854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,2:109:99:91:0,120,1800:0,224,255:40,0 chr2 61455962 . C . PASS END=61456130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:46:0,120,1800:0,138,255:40,0 chr2 61456683 . C . PASS END=61456768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,134,255:40,0 chr2 61459587 . C . PASS END=61459667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,139,255:40,0 chr2 61462980 . C . PASS END=61463045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:50:0,120,1800:0,132,255:40,0 chr2 61463161 . C . PASS END=61463208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,115,1800:0,115,255:40,0 chr2 61463296 . C . PASS END=61463371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,146,255:40,0 chr2 61463460 . C . PASS END=61463524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,154,255:40,0 chr2 61468695 . C . PASS END=61468790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:85:0,120,1800:0,203,255:40,0 chr2 61468901 . C . PASS END=61468954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,1:109:99:93:0,120,1800:0,255,255:40,0 chr2 61472345 . C . PASS END=61472423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:72:0,120,1800:0,200,255:40,0 chr2 61473459 . C . PASS END=61473467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1120:0,88,255:37,0 chr2 61473468 . T . PASS END=61473468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1128:0,78,255:35,0 chr2 61473469 . T . PASS END=61473610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:32:0,84,1260:0,90,255:40,0 chr2 61473611 . A . PASS END=61473611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr2 61473612 . C . PASS END=61473612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 61475646 . C . PASS END=61475818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:35:0,90,1191:0,90,255:40,0 chr2 61483519 . C . PASS END=61483613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:93:54:0,93,1746:0,93,255:40,0 chr2 61484008 . A . PASS END=61484085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:40:0,102,1480:0,102,255:40,0 chr2 61484187 . C . PASS END=61484243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:78:0,120,1800:0,234,255:40,0 chr2 61484339 . C . PASS END=61484474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:87:36:0,87,1305:0,108,255:40,1 chr2 61484475 . C . PASS END=61484475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1064:0,55,255:26,0 chr2 61484476 . A . PASS END=61484480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,88,255:30,0 chr2 61484481 . C . PASS END=61484485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr2 61486846 . C . PASS END=61486911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:64:0,120,1800:0,154,255:40,0 chr2 61492532 . C . PASS END=61492535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,848:0,75,255:26,0 chr2 61492536 . G . PASS END=61492692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:28:0,84,1019:0,84,255:40,0 chr2 61493119 . A . PASS END=61493302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:28:0,80,1055:0,80,255:40,1 chr2 61505300 . C . PASS END=61505420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:61:0,120,1800:0,173,255:40,0 chr2 61505523 . C . PASS END=61505578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:61:0,120,1800:0,182,255:40,0 chr2 61507379 . C . PASS END=61507483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:75:0,120,1800:0,175,255:40,0 chr2 61508225 . C . PASS END=61508377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:81:36:0,81,1215:0,83,255:40,0 chr2 61510280 . C . PASS END=61510404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,99,1485:0,108,255:40,0 chr2 61510544 . C . PASS END=61510584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:66:0,120,1800:0,182,255:40,0 chr2 61512010 . C . PASS END=61512092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,169,255:40,0 chr2 61515812 . C . PASS END=61515822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr2 61515823 . G . PASS END=61515829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,792:0,63,255:25,0 chr2 61515830 . A . PASS END=61516012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,994:0,81,255:40,0 chr2 61520599 . C . PASS END=61520685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:66:0,120,1800:0,143,255:40,0 chr2 61522084 . C . PASS END=61522085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,171,255:40,0 chr2 61522086 . T . PASS END=61522122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,194,255:40,0 chr2 61522123 . T C, 263.68 PASS DP=72;MQ=249.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,38,0:0,34,0:214:301,217,0,2744,217,2744:255,220,0:0,0:2.6368e+02,2.1368e+02,0.0000e+00,4.5000e+02,2.4845e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,39:0,0,37,35 chr2 61522124 . T . PASS END=61522160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:70:0,120,1800:0,173,255:40,0 chr2 61522161 . A . PASS END=61522167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:64:0,120,1800:0,154,255:40,0 chr2 61522303 . C . PASS END=61522425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,134,255:40,0 chr2 61523935 . C . PASS END=61524058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:84:38:0,84,1260:0,93,255:40,0 chr2 61524059 . C . PASS END=61524060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:38:0,72,1080:0,114,255:24,0 chr2 61528086 . C . PASS END=61528243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:35:0,102,1296:0,105,255:40,0 chr2 61528244 . C . PASS END=61528244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,7:51:37:51:0,37,1418:0,37,255:34,0 chr2 61528245 . A . PASS END=61528260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:42:0,88,1477:0,88,255:40,0 chr2 61528261 . T . PASS END=61528261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1389:0,60,255:33,0 chr2 61528262 . C . PASS END=61528285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1225:0,86,255:33,0 chr2 61528286 . C . PASS END=61528286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:28,0 chr2 61528287 . A . PASS END=61528287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 61528288 . A . PASS END=61528288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:27,0 chr2 61528289 . A . PASS END=61528294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,976:0,82,255:29,0 chr2 61528295 . T . PASS END=61528295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 61528489 . C . PASS END=61528589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,109,1710:0,109,255:40,0 chr2 61538675 . C . PASS END=61538679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,110,1557:0,110,255:40,0 chr2 61538680 . A . PASS END=61538682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 61538683 . T . PASS END=61538683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1341:0,62,255:38,0 chr2 61538684 . C . PASS END=61538822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,114,1725:0,114,255:40,0 chr2 61538919 . C . PASS END=61538943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,106,1527:0,106,255:40,0 chr2 61538944 . C . PASS END=61538944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1808:0,79,255:40,0 chr2 61538945 . A . PASS END=61539045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:41:0,84,1415:0,84,255:40,0 chr2 61541720 . C . PASS END=61541720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 61541721 . T . PASS END=61541722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,800:0,42,255:24,0 chr2 61541723 . C . PASS END=61541879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:28:0,84,959:0,84,255:40,0 chr2 61542010 . C . PASS END=61542109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:36:0,84,1260:0,99,255:40,0 chr2 61544789 . C . PASS END=61544902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:36:0,92,1318:0,92,255:40,0 chr2 61546308 . C . PASS END=61546311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1575:0,111,255:38,0 chr2 61546312 . T . PASS END=61546312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr2 61546313 . C . PASS END=61546462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:40:0,110,1498:0,110,255:40,0 chr2 61552510 . T . PASS END=61552592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,120,1800:0,132,255:40,0 chr2 61558411 . A . PASS END=61558506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:41:0,96,1552:0,96,255:40,0 chr2 61561017 . A . PASS END=61561017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1484:0,109,255:40,0 chr2 61561018 . T . PASS END=61561018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1770:0,79,255:40,0 chr2 61561019 . T . PASS END=61561106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:52:0,120,1800:0,144,255:40,0 chr2 61566486 . C . PASS END=61566613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:62:0,120,1800:0,164,255:40,0 chr2 61566701 . T . PASS END=61566774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,2:102:99:73:0,120,1800:0,201,255:40,0 chr2 61566775 . T . PASS END=61566816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:75:0,120,1800:0,190,255:40,0 chr2 61570950 . C . PASS END=61571141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:36:0,90,1313:0,98,255:40,0 chr2 61571142 . T . PASS END=61571142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:28,0 chr2 61571143 . T . PASS END=61571147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr2 61571148 . T . PASS END=61571164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr2 61575005 . C . PASS END=61575024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,109,1800:0,109,255:40,3 chr2 61575025 . G . PASS END=61575025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,4:72:73:72:0,73,2417:0,73,255:40,3 chr2 61575026 . T . PASS END=61575270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:55:0,120,1800:0,137,255:40,1 chr2 61575271 . C . PASS END=61575307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:47:0,83,1575:0,83,255:40,0 chr2 61575308 . A G, 187.53 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,21,0:0,26,0:138:225,141,0,1748,141,1748:255,141,0:0,0:1.8753e+02,1.3753e+02,0.0000e+00,4.5000e+02,1.7230e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,29:0,0,24,23 chr2 61575309 . T . PASS END=61575345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:44:0,97,1605:0,97,255:40,0 chr2 61575346 . C . PASS END=61575615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:30:0,84,1260:0,90,255:40,0 chr2 61575891 . C . PASS END=61576021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:47:0,114,1710:0,140,255:40,0 chr2 61576385 . A . PASS END=61576420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:34:0,93,1395:0,97,255:39,0 chr2 61577395 . C . PASS END=61577524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:56:0,120,1800:0,168,255:40,0 chr2 61577703 . C . PASS END=61577710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,134,255:40,0 chr2 61577711 . T . PASS END=61577828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:94:35:0,94,1312:0,94,255:40,0 chr2 61597456 . C . PASS END=61597548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:33:0,86,1202:0,86,255:40,0 chr2 61597633 . C . PASS END=61597714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:59:0,120,1800:0,161,255:40,0 chr2 61605498 . G . PASS END=61605559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:71:0,120,1800:0,200,255:40,0 chr2 61607304 . T . PASS END=61607496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,120,1800:0,123,255:40,0 chr2 61610404 . C . PASS END=61610471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,186,255:40,0 chr2 61621988 . A . PASS END=61622137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:49:0,99,1485:0,147,255:40,0 chr2 61622318 . A . PASS END=61622324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,149,255:40,0 chr2 61622325 . T . PASS END=61622368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,164,255:40,0 chr2 61632843 . C . PASS END=61633247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:93:31:0,93,1008:0,93,255:40,0 chr2 61633248 . G . PASS END=61633254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:39:0,60,900:0,101,255:24,0 chr2 61633255 . A . PASS END=61633263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:48:24:0,48,720:0,72,255:19,0 chr2 61647881 . C . PASS END=61647968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:37:0,93,1395:0,95,255:40,0 chr2 61697785 . T . PASS END=61697788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 61697789 . A . PASS END=61697789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 61697790 . T . PASS END=61697791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr2 61697792 . T . PASS END=61697792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:15,0 chr2 61697793 . A . PASS END=61697793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 61697794 . A . PASS END=61697794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 61697795 . C . PASS END=61697795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 61697796 . A . PASS END=61697797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 61697798 . C . PASS END=61697798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 61697799 . T . PASS END=61697799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 61697800 . C . PASS END=61697800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr2 61697801 . C . PASS END=61697801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 61697802 . A . PASS END=61697804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 61697805 . A . PASS END=61697805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,543:0,20,255:16,0 chr2 61697806 . G . PASS END=61697807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr2 61697808 . T . PASS END=61697810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:16,0 chr2 61697811 . G . PASS END=61697814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr2 61697815 . A . PASS END=61697815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 61697816 . G . PASS END=61697817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 61697818 . T . LowGQ END=61697818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,496:4,0,255:12,0 chr2 61697819 . C . PASS END=61697819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 61697820 . T . PASS END=61697823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:13,0 chr2 61697824 . A . PASS END=61697824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,505:0,12,255:11,0 chr2 61697825 . C . PASS END=61697825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 61697826 . A . PASS END=61697826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,449:0,15,255:11,0 chr2 61697827 . T . PASS END=61697827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:11,0 chr2 61703856 . A G, 178.03 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,16,0:0,28,0:128:216,131,0,316,316,316:255,132,0:0,0:1.7803e+02,1.2803e+02,0.0000e+00,3.1280e+02,3.4757e+02,3.1581e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,23,21:0,0,23,21 chr2 61705955 . T . PASS END=61706101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1117:0,81,255:40,0 chr2 61708320 . C . PASS END=61708416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:64:0,120,1800:0,181,255:40,0 chr2 61709515 . T . PASS END=61709674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:42:0,105,1575:0,119,255:40,0 chr2 61710092 . C . PASS END=61710226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,111,1665:0,112,255:40,0 chr2 61710573 . A C, 161.37 PASS DP=39;MQ=249.75;FractionInformativeReads=0.974 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,21,0:0,17,0:111:199,114,0,1466,114,1466:255,117,0:0,0:1.6137e+02,1.1137e+02,0.0000e+00,4.5000e+02,1.4614e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,18:0,0,25,13 chr2 61711072 . C . PASS END=61711240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:45:0,120,1800:0,124,255:40,1 chr2 61712903 . C . PASS END=61713072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:46:0,120,1800:0,122,255:40,0 chr2 61713073 . G . PASS END=61713097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,131,255:40,0 chr2 61715300 . C . PASS END=61715406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,111,1665:0,128,255:40,0 chr2 61715723 . C . PASS END=61715893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:39:0,81,1215:0,90,255:40,0 chr2 61715894 . G . PASS END=61715903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:33:0,60,900:0,83,255:26,0 chr2 61715904 . A . PASS END=61715906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 61717777 . T . PASS END=61717911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:83:32:0,83,1113:0,83,255:40,0 chr2 61719170 . C . PASS END=61719181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,117,1753:0,117,255:40,0 chr2 61719182 . A C, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.876;ReadPosRankSum=3.518;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,31,0:0.620,0.000:50:10,13,0:9,18,0:46:85,0,45,998,672,1670:255,0,255:18,0:5.0000e+01,1.0665e-04,4.8363e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,5,18,13:15,4,14,17 chr2 61719183 . A . PASS END=61719219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,116,1800:0,116,255:40,0 chr2 61719220 . C . PASS END=61719333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:41:0,84,1413:0,84,255:40,0 chr2 61719460 . C . PASS END=61719616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,101,1800:0,101,255:40,0 chr2 61719702 . C . PASS END=61719876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:36:0,81,1215:0,108,255:40,0 chr2 61719877 . A . PASS END=61719883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,92,255:26,0 chr2 61720050 . C . PASS END=61720188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,117,1755:0,129,255:40,0 chr2 61721029 . C . PASS END=61721226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:34:0,81,1183:0,97,255:40,0 chr2 61722590 . C . PASS END=61722748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:43:0,113,1596:0,113,255:40,0 chr2 61724014 . C . PASS END=61724142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:89:31:0,89,1164:0,89,255:40,0 chr2 61725808 . C . PASS END=61725927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:54:0,120,1800:0,143,255:40,0 chr2 61726000 . C . PASS END=61726048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:94:0,120,1800:0,206,255:40,0 chr2 61726848 . C . PASS END=61727025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:84:34:0,84,1233:0,86,255:40,0 chr2 61727026 . G . PASS END=61727029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:69:35:0,69,1035:0,88,255:23,0 chr2 61729131 . C . PASS END=61729175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:74:0,120,1800:0,209,255:40,0 chr2 61729384 . C . PASS END=61729445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,165,255:40,0 chr2 61749746 . C . PASS END=61749753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:52:0,120,1800:0,129,255:40,0 chr2 61749754 . T . PASS END=61749818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,133,255:40,1 chr2 61752627 . C . PASS END=61752656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:89:0,120,1800:0,175,255:40,0 chr2 61753534 . T . PASS END=61753656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:36:0,99,1485:0,104,255:40,0 chr2 61760907 . C . PASS END=61761022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:36:0,92,1324:0,92,255:40,2 chr2 61761023 . T . PASS END=61761023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:32,0 chr2 61761024 . T . PASS END=61761032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:33,0 chr2 62052039 . T . PASS END=62052039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 62052041 . C . PASS END=62052041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 62052083 . C . PASS END=62052083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 62052158 . A . PASS END=62052158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 62052222 . T . PASS END=62052222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 62052241 . T . PASS END=62052241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr2 62052245 . C . PASS END=62052245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 62052291 . A . PASS END=62052291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 62052338 . T . PASS END=62052338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 62052367 . T . PASS END=62052367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 62052446 . A . PASS END=62052446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr2 62052454 . C . PASS END=62052454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 62052461 . T . PASS END=62052461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 62052490 . A . PASS END=62052490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 62053394 . T . PASS END=62053394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 62053507 . C . PASS END=62053507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 62053522 . C . PASS END=62053522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 62053546 . C . PASS END=62053546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,102,1530:0,107,255:34,0 chr2 62053590 . T . PASS END=62053734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:64:0,120,1800:0,161,255:40,0 chr2 62054239 . C . PASS END=62054393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,120,1800:0,139,255:40,0 chr2 62063141 . C . PASS END=62063141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:72:0,120,1800:0,168,255:40,0 chr2 62063145 . C . PASS END=62063244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:92:41:0,92,1316:0,92,255:40,0 chr2 62065673 . C . PASS END=62065677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 62065678 . A . PASS END=62065678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr2 62065679 . C . PASS END=62065690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,901:0,72,255:26,0 chr2 62065691 . G . PASS END=62065692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr2 62065693 . T . PASS END=62065693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 62065694 . T . PASS END=62065725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1011:0,84,255:40,0 chr2 62065726 . A . PASS END=62065726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1518:0,71,255:40,1 chr2 62065727 . T . PASS END=62065758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:47:0,102,1587:0,102,255:40,1 chr2 62065759 . C . PASS END=62065759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:75:58:0,75,1766:0,75,255:40,0 chr2 62065760 . A . PASS END=62065840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,117,1755:0,124,255:40,0 chr2 62065842 . T . PASS END=62065842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,117,1755:0,138,255:39,0 chr2 62065846 . G . PASS END=62065847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:44:0,90,1350:0,132,255:31,0 chr2 62066543 . C . PASS END=62066543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr2 62066545 . T . PASS END=62066545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 62066556 . C . PASS END=62066567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,971:0,84,255:31,0 chr2 62066568 . T . PASS END=62066568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:30,0 chr2 62066569 . C . PASS END=62066764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:31:0,93,1156:0,93,255:40,0 chr2 62066765 . A . PASS END=62066765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1504:0,74,255:36,0 chr2 62066766 . T . PASS END=62066815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,102,1419:0,104,255:40,0 chr2 62066816 . G . PASS END=62066816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:34,0 chr2 62066817 . T . PASS END=62066817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 62066818 . G . PASS END=62066826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:36,0 chr2 62066827 . A . PASS END=62066827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 62066828 . T . PASS END=62066828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1214:0,75,255:34,0 chr2 62066829 . C . PASS END=62066889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,102,1279:0,102,255:40,0 chr2 62066890 . T . PASS END=62066926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:40:0,102,1502:0,102,255:40,0 chr2 62066927 . A G, 166.47 PASS DP=41;MQ=250.00;FractionInformativeReads=0.976 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,19,0:0,21,0:116:204,119,0,1485,119,1485:255,120,0:0,0:1.6647e+02,1.1647e+02,0.0000e+00,4.5000e+02,1.5124e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,20:0,0,21,19 chr2 62066928 . C . PASS END=62066964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,108,1443:0,112,255:40,0 chr2 62066965 . A . PASS END=62067003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1350:0,95,255:40,0 chr2 62067004 . A . PASS END=62067004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1059:0,74,255:33,0 chr2 62067005 . G . PASS END=62067160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:34:0,92,1236:0,92,255:40,0 chr2 62067161 . T . PASS END=62067161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1388:0,79,255:40,0 chr2 62067162 . T . PASS END=62067699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:35:0,94,1427:0,94,255:40,0 chr2 62067700 . T . PASS END=62067700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:31,0 chr2 62067701 . C . PASS END=62067716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:34,0 chr2 62069254 . T . PASS END=62069254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 62069257 . C . PASS END=62069258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 62069259 . G . PASS END=62069259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 62069260 . G . PASS END=62069320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1103:0,80,255:40,0 chr2 62069321 . T . PASS END=62069357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:41:0,107,1474:0,107,255:40,0 chr2 62069358 . T C, 196.56 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,29,0:0,21,0:147:234,150,0,1867,150,1867:255,153,0:0,0:1.9656e+02,1.4656e+02,0.0000e+00,4.5000e+02,1.8133e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,27:0,0,22,28 chr2 62069359 . A . PASS END=62069395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,106,1729:0,106,255:40,0 chr2 62069396 . A . PASS END=62069490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,105,1452:0,105,255:40,0 chr2 62069491 . T . PASS END=62069495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1463:0,104,255:39,0 chr2 62080994 . C . PASS END=62081011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr2 62081012 . A C, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,11,0:0,12,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,8:0,0,15,8 chr2 62081013 . G . PASS END=62081042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,817:0,66,255:23,0 chr2 62081043 . A . PASS END=62081043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr2 62081044 . T . PASS END=62081049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:23,0 chr2 62081050 . C . PASS END=62081056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr2 62081057 . C . PASS END=62081057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 62081058 . G . PASS END=62081070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr2 62081071 . A . PASS END=62081071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 62081072 . G . PASS END=62081078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,892:0,69,255:23,0 chr2 62081079 . T . PASS END=62081081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 62081082 . C . PASS END=62081098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:22,0 chr2 62081099 . C . PASS END=62081124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr2 62081125 . G . PASS END=62081128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr2 62081129 . C . PASS END=62081129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr2 62081130 . T . PASS END=62081142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 62081143 . C . PASS END=62081176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:17,0 chr2 62081257 . T . PASS END=62081257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 62095827 . T . PASS END=62095841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,171,255:40,0 chr2 62096575 . C . PASS END=62096575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr2 62096576 . A . PASS END=62096581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr2 62096582 . T . PASS END=62096582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:27,0 chr2 62096583 . C . PASS END=62096583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 62096584 . T . PASS END=62096584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 62096585 . A . PASS END=62096590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 62096591 . A . PASS END=62096591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr2 62096592 . G . PASS END=62096593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 62096594 . A . PASS END=62096594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 62096595 . T . PASS END=62096612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:33:0,90,1296:0,99,255:38,0 chr2 62096613 . T . PASS END=62096613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr2 62096614 . T . PASS END=62096619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,117,1460:0,117,255:40,0 chr2 62096620 . A . PASS END=62096620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:39,0 chr2 62096621 . G . PASS END=62096674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:37:0,94,1287:0,94,255:40,0 chr2 62096675 . T . PASS END=62096676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1135:0,72,255:35,0 chr2 62096677 . G . PASS END=62096685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:37:0,97,1313:0,97,255:35,0 chr2 62096686 . A . PASS END=62096686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:32,0 chr2 62096687 . C . PASS END=62096688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1485:0,105,255:33,0 chr2 62099217 . C . PASS END=62099228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:26,0 chr2 62099229 . A . PASS END=62099232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr2 62099233 . C . PASS END=62099233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,934:0,48,255:28,0 chr2 62099234 . C . PASS END=62099438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1064:0,87,255:40,0 chr2 62099439 . T . PASS END=62099451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,81,255:26,0 chr2 62099593 . C . PASS END=62099714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:37:0,84,1260:0,101,255:40,0 chr2 62099715 . G . PASS END=62099716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:39:0,75,1125:0,117,255:26,0 chr2 62099717 . C . PASS END=62099717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,120,255:27,0 chr2 62099718 . T . PASS END=62099723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,104,255:26,0 chr2 62100137 . C . PASS END=62100247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,110,1504:0,110,255:40,0 chr2 62100332 . C . PASS END=62100342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr2 62100343 . A . PASS END=62100379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,154,255:40,0 chr2 62100380 . G T, 46.69 PASS DP=67;MQ=247.21;MQRankSum=5.950;ReadPosRankSum=4.493;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,27,0:0.403,0.000:67:19,14,0:21,13,0:46:81,0,50,898,1357,2255:255,0,255:38,0:4.6686e+01,1.1494e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,23,14,13:16,24,9,18 chr2 62100381 . A . PASS END=62100417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,168,255:40,0 chr2 62100418 . T . PASS END=62100428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,150,255:40,0 chr2 62103230 . C . PASS END=62103369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:93:40:0,93,1395:0,102,255:40,0 chr2 62104055 . G . PASS END=62104187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:89:35:0,89,1228:0,89,255:40,0 chr2 62104528 . C . PASS END=62104610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:84:37:0,84,1282:0,84,255:40,0 chr2 62104611 . A . PASS END=62104649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:45:0,81,1215:0,105,255:40,0 chr2 62106004 . C . PASS END=62106006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 62106007 . T . PASS END=62106007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 62106008 . G . PASS END=62106010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:25,0 chr2 62106011 . T . PASS END=62106011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 62106012 . T . PASS END=62106014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 62106015 . G . PASS END=62106023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 62106024 . T . PASS END=62106024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 62106025 . T . PASS END=62106026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,978:0,67,255:28,0 chr2 62106027 . C . PASS END=62106030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1040:0,87,255:29,0 chr2 62106031 . A . PASS END=62106031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1004:0,59,255:28,0 chr2 62106032 . T . PASS END=62106033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 62106034 . T . PASS END=62106034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1036:0,74,255:27,0 chr2 62106035 . A . PASS END=62106036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 62106037 . C . PASS END=62106037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1045:0,60,255:28,0 chr2 62106038 . A . PASS END=62106038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 62106039 . A . PASS END=62106039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr2 62106040 . A . PASS END=62106043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1041:0,84,255:28,0 chr2 62106044 . T . PASS END=62106044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:27,0 chr2 62106045 . C . PASS END=62106070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:29:0,86,1068:0,86,255:32,0 chr2 62106071 . G . PASS END=62106083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,81,255:26,0 chr2 62106084 . A . PASS END=62106084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 62106085 . G . PASS END=62106086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1015:0,71,255:26,0 chr2 62106087 . T . PASS END=62106091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 62106092 . A . PASS END=62106096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 62106097 . C . PASS END=62106097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:25,1 chr2 62106098 . T . PASS END=62106099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1026:0,35,255:24,1 chr2 62106100 . T . PASS END=62106120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,931:0,64,255:26,0 chr2 62106121 . C . PASS END=62106146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:19,0 chr2 62107421 . C . PASS END=62107521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,954:0,81,255:40,0 chr2 62107522 . T . PASS END=62107522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 62107523 . C . PASS END=62107526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 62107527 . C . PASS END=62107529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 62110594 . C . PASS END=62110608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:64:0,106,1800:0,106,255:40,0 chr2 62110609 . A . PASS END=62110683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:53:0,120,1800:0,126,255:40,0 chr2 62112155 . C . PASS END=62112178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:44:0,88,1455:0,88,255:40,0 chr2 62112179 . A . PASS END=62112186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:87:47:0,87,1305:0,124,255:37,0 chr2 62112187 . T . PASS END=62112201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:60:42:0,60,900:0,113,255:25,0 chr2 62112202 . C . PASS END=62112205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:42:42:0,42,630:0,93,255:16,0 chr2 62112206 . C . PASS END=62112207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:36:42:0,36,540:0,126,255:13,0 chr2 62115516 . C . PASS END=62115516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1244:0,94,255:36,0 chr2 62115517 . T . PASS END=62115517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1136:0,63,255:35,0 chr2 62115518 . T . PASS END=62115519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1234:0,94,255:37,0 chr2 62115520 . G . PASS END=62115520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1085:0,63,255:35,0 chr2 62115521 . G . PASS END=62115524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1230:0,80,255:37,0 chr2 62115525 . C . PASS END=62115525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1227:0,64,255:35,0 chr2 62115526 . G . PASS END=62115527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1349:0,95,255:36,0 chr2 62115528 . A . PASS END=62115528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1117:0,47,255:34,0 chr2 62115529 . A . PASS END=62115529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:35,0 chr2 62115530 . A . PASS END=62115531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1274:0,94,255:35,0 chr2 62115532 . G . PASS END=62115532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:34,0 chr2 62115533 . T . PASS END=62115540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1260:0,80,255:35,0 chr2 62115541 . G . PASS END=62115541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1190:0,64,255:32,0 chr2 62115542 . C . PASS END=62115579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1311:0,84,255:40,0 chr2 62115580 . T . PASS END=62115580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:13:36:0,13,1079:0,13,255:30,0 chr2 62115581 . T . PASS END=62115600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr2 62115601 . C . PASS END=62115623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,71,255:25,0 chr2 62115624 . G . PASS END=62115632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr2 62115633 . T . PASS END=62115633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,590:0,30,255:16,0 chr2 62115634 . C . PASS END=62115642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr2 62132814 . A . PASS END=62132817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr2 62132818 . C . PASS END=62132818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 62132819 . G . PASS END=62132826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 62132827 . A . PASS END=62132843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,522:0,40,255:19,0 chr2 62132844 . C . PASS END=62132854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:25,0 chr2 62132855 . G . PASS END=62132855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 62132856 . C . PASS END=62132870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,953:0,65,255:26,0 chr2 62132871 . G . PASS END=62132958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,956:0,80,255:36,0 chr2 62132959 . G . PASS END=62132959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr2 62132960 . C . PASS END=62132966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr2 62132967 . C . PASS END=62132977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:26,0 chr2 62132978 . G . PASS END=62132981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 62132982 . G . PASS END=62132987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 62132988 . C . PASS END=62132991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 62132992 . A . PASS END=62132993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 62142817 . A . PASS END=62142821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,939:0,78,255:26,0 chr2 62142822 . G . PASS END=62142853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1041:0,84,255:34,0 chr2 62142854 . A . PASS END=62142854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,964:0,63,255:28,0 chr2 62142855 . T . PASS END=62142866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:33,0 chr2 62142867 . A . PASS END=62142867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1156:0,68,255:32,0 chr2 62172252 . A . PASS END=62172254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:85:0,120,1800:0,255,255:40,0 chr2 62227836 . T . PASS END=62227840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,651:0,51,255:19,0 chr2 62227841 . T . PASS END=62227853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,752:0,60,255:22,0 chr2 62227854 . A . PASS END=62227854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 62227855 . T . PASS END=62227876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,829:0,61,255:26,0 chr2 62227877 . A . PASS END=62227880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1034:0,90,255:31,0 chr2 62227881 . T . PASS END=62227881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 62227882 . T . PASS END=62228029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:31:0,84,1061:0,84,255:37,0 chr2 62228030 . A . PASS END=62228030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:29,0 chr2 62228031 . G . PASS END=62228031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 62228032 . T . PASS END=62228032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr2 62228033 . T . PASS END=62228053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1135:0,83,255:32,0 chr2 62228054 . G . PASS END=62228054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 62228055 . C . PASS END=62228058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 62228059 . C . PASS END=62228080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:23:0,60,900:0,69,255:26,0 chr2 62228081 . T . PASS END=62228103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,44,255:16,0 chr2 62228104 . G . PASS END=62228117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 62239839 . C . PASS END=62239859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,202,255:40,0 chr2 62362966 . G . PASS END=62363076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,119,1800:0,119,255:40,0 chr2 62449356 . A . PASS END=62449358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1584:0,118,255:40,0 chr2 62449359 . A . PASS END=62449360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:63:45:0,63,1450:0,63,255:40,0 chr2 62449361 . T . PASS END=62449801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:34:0,84,1197:0,88,255:40,0 chr2 62449802 . G . PASS END=62449825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:26:0,63,945:0,78,255:26,0 chr2 62449826 . A . PASS END=62449857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1011:0,83,255:33,0 chr2 62449858 . A . PASS END=62449858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1083:0,52,255:31,0 chr2 62449859 . A . PASS END=62449862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:32,0 chr2 62449863 . A . PASS END=62449863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr2 62449864 . A . PASS END=62449875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1196:0,85,255:34,0 chr2 62449876 . A . PASS END=62449876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:32,0 chr2 62449877 . A . PASS END=62449877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 62449878 . A . PASS END=62449878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1150:0,56,255:31,0 chr2 62449879 . C . PASS END=62450222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:32:0,83,1180:0,83,255:40,0 chr2 62450223 . T . PASS END=62450223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:34,0 chr2 62450224 . A . PASS END=62450269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:35,0 chr2 62450270 . G . PASS END=62450298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:26,0 chr2 62450299 . T . PASS END=62450299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 62450300 . G . PASS END=62450319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:26,0 chr2 62450320 . T . PASS END=62450426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1047:0,84,255:40,0 chr2 62450427 . A . PASS END=62450427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1709:0,73,255:40,0 chr2 62450428 . T . PASS END=62450549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1305:0,92,255:40,0 chr2 62680713 . T . PASS END=62680733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1435:0,104,255:40,0 chr2 62683820 . T . PASS END=62683886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1305:0,93,255:40,0 chr2 62686455 . G . PASS END=62686455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 62686456 . T . PASS END=62686460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 62686461 . G . PASS END=62686461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 62686462 . A . PASS END=62686475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:15,0 chr2 62686476 . T . PASS END=62686476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 62686477 . G . PASS END=62686486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr2 62686487 . A . PASS END=62686487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:15,0 chr2 62686488 . A . PASS END=62686488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 62686489 . T . PASS END=62686489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 62686490 . G . PASS END=62686507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:18,0 chr2 62686508 . G . PASS END=62686521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,686:0,60,255:23,0 chr2 62686522 . T . PASS END=62686522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 62686523 . G . PASS END=62686540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,748:0,69,255:23,0 chr2 62686541 . T . PASS END=62686541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:19,0 chr2 62686542 . T . PASS END=62686542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:19,0 chr2 62686543 . G . PASS END=62686552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 62686553 . A . PASS END=62686583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,675:0,44,255:19,0 chr2 62686584 . T . PASS END=62686584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 62686585 . T . PASS END=62686605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 62686606 . T . PASS END=62686606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr2 62686607 . C . PASS END=62686614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 62686615 . A . PASS END=62686615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 62688206 . A . PASS END=62688298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:30:0,87,1182:0,88,255:40,0 chr2 62709698 . T . PASS END=62709700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr2 62709701 . G . PASS END=62709703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 62709704 . C . PASS END=62709704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 62709705 . A . PASS END=62709705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 62709706 . T . PASS END=62709706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr2 62709707 . C . PASS END=62709708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 62709709 . T . PASS END=62709710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 62709711 . T . PASS END=62709712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 62709713 . C . PASS END=62709713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 62709714 . T . PASS END=62709731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,901:0,62,255:26,0 chr2 62709732 . G . PASS END=62709734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr2 62709735 . C . PASS END=62709738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,931:0,67,255:29,0 chr2 62709739 . G . PASS END=62709810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:30:0,90,1103:0,90,255:40,0 chr2 62709811 . T . PASS END=62709811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1340:0,67,255:35,0 chr2 62709812 . G . PASS END=62709867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:37:0,83,1328:0,83,255:39,0 chr2 62709868 . T . PASS END=62709868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1180:0,47,255:30,0 chr2 62709869 . G . PASS END=62709883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:33,0 chr2 62728344 . T . PASS END=62728346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 62728347 . G . PASS END=62728369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1063:0,84,255:40,0 chr2 62728370 . T . PASS END=62728370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:40,0 chr2 62728371 . C . PASS END=62728517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:85:44:0,85,1418:0,85,255:40,2 chr2 62728518 . T . PASS END=62728518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1615:0,72,255:40,2 chr2 62728519 . T . PASS END=62728622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1372:0,95,255:40,0 chr2 62729572 . C . PASS END=62729636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:39:0,107,1443:0,107,255:40,0 chr2 62729637 . T . PASS END=62729673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,117,1755:0,131,255:40,0 chr2 62729674 . T C, 190.55 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,25,0:0,23,0:141:228,144,0,1792,144,1792:255,144,0:0,0:1.9055e+02,1.4055e+02,0.0000e+00,4.5000e+02,1.7532e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,26:0,0,19,29 chr2 62729675 . A . PASS END=62729685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1530:0,119,255:40,0 chr2 62729826 . C . PASS END=62729929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,102,1341:0,108,255:40,0 chr2 62733165 . C . PASS END=62733168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 62733169 . A . PASS END=62733174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr2 62733175 . A . PASS END=62733175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 62733176 . T . PASS END=62733180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:46:17:0,46,662:0,46,255:19,0 chr2 62733181 . C . PASS END=62733188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr2 62733189 . C . PASS END=62733189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 62733190 . G . PASS END=62733205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr2 62733206 . C G, 48.42 PASS DP=22;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=3.005;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,9,0:0.409,0.000:22:8,6,0:5,3,0:47:83,0,50,322,442,771:255,0,255:12,0:4.8415e+01,8.4389e-05,5.3000e+01,3.2201e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,4,5:7,6,5,4 chr2 62733207 . T . PASS END=62733246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,770:0,66,255:23,0 chr2 62733247 . C . PASS END=62733252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,798:0,53,255:19,0 chr2 62733253 . C T, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=1.992;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,13,0:0.619,0.000:21:5,7,0:3,6,0:47:85,0,47,465,286,751:255,0,217:7,0:5.0000e+01,8.3095e-05,5.0392e+01,4.5000e+02,3.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,6,6,7:5,3,6,7 chr2 62733254 . G . PASS END=62733258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 62733259 . C . PASS END=62733259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 62733260 . T . PASS END=62733260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr2 62733261 . C . PASS END=62733262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 62733263 . A . PASS END=62733264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr2 62738922 . C . PASS END=62738922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr2 62738923 . T . PASS END=62738930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1327:0,105,255:36,0 chr2 62738931 . G C, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,20,0:0,17,0:108:196,111,0,1427,111,1427:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,16:0,0,16,21 chr2 62738932 . A . PASS END=62738946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1365:0,108,255:36,0 chr2 62901221 . A . PASS END=62901228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:73:0,120,1800:0,189,255:40,0 chr2 62934327 . A . PASS END=62934430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:36:0,82,1279:0,82,255:40,0 chr2 62974530 . G . PASS END=62974587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:44:0,96,1440:0,119,255:40,0 chr2 62991401 . G . PASS END=62991496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,140,255:40,0 chr2 62998474 . G . PASS END=62998527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:76:0,120,1800:0,194,255:40,0 chr2 63053222 . G . PASS END=63053223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 63053224 . A . PASS END=63053403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:27:0,81,976:0,81,255:40,0 chr2 63058154 . A . PASS END=63058293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:32:0,96,1172:0,96,255:40,0 chr2 63085541 . A . PASS END=63085645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,108,1620:0,111,255:40,0 chr2 63086304 . A . PASS END=63086426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,99,1485:0,116,255:40,0 chr2 63091866 . A . PASS END=63091866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 63091867 . A . PASS END=63091869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:31,0 chr2 63091870 . T . PASS END=63091870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 63091871 . A . PASS END=63091871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:30,0 chr2 63091872 . T . PASS END=63091900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1141:0,86,255:34,0 chr2 63091901 . G . PASS END=63091901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 63091902 . A . PASS END=63091903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 63091904 . G . PASS END=63091904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:30,0 chr2 63091905 . A . PASS END=63091916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1127:0,80,255:33,0 chr2 63091917 . A . PASS END=63091917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:31,0 chr2 63091918 . T . PASS END=63092106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:34:0,86,1202:0,86,255:40,0 chr2 63101481 . A . PASS END=63101647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1221:0,89,255:40,0 chr2 63101648 . A . PASS END=63101651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:33:0,72,1073:0,72,255:26,0 chr2 63101652 . C . PASS END=63101652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 63101653 . T . PASS END=63101667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,74,255:26,0 chr2 63131731 . G . PASS END=63131731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 63169853 . C . PASS END=63170031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:42:0,113,1559:0,113,255:40,0 chr2 63170937 . T . PASS END=63170942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,162,255:40,0 chr2 63170943 . C . PASS END=63170985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:57:0,114,1800:0,114,255:40,0 chr2 63175395 . G . PASS END=63175702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:32:0,81,1215:0,96,255:40,0 chr2 63175703 . A . PASS END=63175703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 63175704 . C . PASS END=63176101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1103:0,84,255:40,0 chr2 63176102 . C . PASS END=63176138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:74:0,120,1800:0,199,255:40,0 chr2 63176139 . A C, 50.00 PASS DP=75;MQ=250.00;MQRankSum=7.413;ReadPosRankSum=4.922;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,41,0:0.547,0.000:75:18,26,0:16,15,0:48:85,0,49,1413,1208,2629:255,0,255:33,0:5.0000e+01,6.9116e-05,5.2292e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,16,17,24:14,20,22,19 chr2 63176140 . A . PASS END=63176176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:71:0,120,1800:0,189,255:40,0 chr2 63176177 . A . PASS END=63176297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,122,255:40,0 chr2 63182652 . C . PASS END=63182656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:25,0 chr2 63182657 . A . PASS END=63182658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 63182659 . T . PASS END=63182659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 63182660 . G . PASS END=63182675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:35,0 chr2 63182676 . G . PASS END=63182676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr2 63182677 . A . PASS END=63182795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:35:0,95,1349:0,95,255:40,0 chr2 63206323 . C . PASS END=63206326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 63206327 . A . PASS END=63206327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 63206328 . A . PASS END=63206329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 63206330 . A . PASS END=63206470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1133:0,87,255:40,0 chr2 63215066 . A . PASS END=63215173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:54:0,120,1800:0,154,255:40,0 chr2 63217851 . A . PASS END=63217937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:30:0,86,1133:0,86,255:40,0 chr2 63217938 . A . PASS END=63217938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr2 63217939 . G . PASS END=63217950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:33,0 chr2 63217951 . T . PASS END=63217957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr2 63217958 . T . PASS END=63217969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:24:0,54,810:0,59,255:18,0 chr2 63217970 . A . PASS END=63217970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 63217971 . T . PASS END=63217972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr2 63217973 . A . PASS END=63217973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr2 63217974 . A . PASS END=63217975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 63220665 . A . PASS END=63220803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:55:0,120,1800:0,149,255:40,0 chr2 63221006 . A . PASS END=63221038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,4:82:99:61:0,120,1800:0,145,255:40,0 chr2 63221039 . C . PASS END=63221112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:69:0,120,1800:0,126,255:40,0 chr2 63223778 . A . PASS END=63223778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 63223779 . A . PASS END=63223800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1133:0,82,255:39,0 chr2 63223801 . G A, 48.18 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=0.931;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:11,10,0:15,9,0:47:83,0,50,664,861,1525:255,0,255:25,0:4.8180e+01,8.7754e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,12,8,11:11,15,9,10 chr2 63223802 . T . PASS END=63223851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,109,1725:0,109,255:40,0 chr2 63223852 . C . PASS END=63223896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:40:0,81,1260:0,81,255:40,0 chr2 63223897 . C . PASS END=63223901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:36:0,60,900:0,73,255:22,0 chr2 63240426 . G . PASS END=63240451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:88:0,120,1800:0,247,255:40,0 chr2 63264670 . G . PASS END=63264769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:67:0,120,1800:0,166,255:40,0 chr2 63265878 . G . PASS END=63265951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:81:0,120,1800:0,152,255:40,0 chr2 63272201 . A . PASS END=63272203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 63272204 . G . PASS END=63272204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 63272205 . G . PASS END=63272210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 63272211 . G . PASS END=63272211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,690:0,32,255:20,0 chr2 63272212 . A . PASS END=63272216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 63272217 . G . PASS END=63272217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 63272218 . G . PASS END=63272238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:25,0 chr2 63272239 . C . PASS END=63272239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 63272240 . T . PASS END=63272248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 63272249 . A . PASS END=63272249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,890:0,39,255:22,0 chr2 63272250 . T . PASS END=63272256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,953:0,62,255:25,0 chr2 63272257 . G . PASS END=63272257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr2 63272258 . T . PASS END=63272263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,969:0,75,255:25,0 chr2 63272264 . T . PASS END=63272264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 63272265 . G . PASS END=63272275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 63272276 . G . PASS END=63272287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:22:0,56,853:0,56,255:19,0 chr2 63272288 . T . PASS END=63272301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 63272302 . G . PASS END=63272315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr2 63272545 . G . PASS END=63272634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:36:0,84,1260:0,88,255:40,0 chr2 63272635 . G . PASS END=63272635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:24,0 chr2 63280126 . A . PASS END=63280130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr2 63280131 . G . PASS END=63280131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 63280132 . T . PASS END=63280132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 63280133 . C . PASS END=63280153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,283:0,30,255:12,0 chr2 63280154 . A . PASS END=63280154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 63280155 . C . PASS END=63280164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 63280165 . G . PASS END=63280165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 63280166 . G . PASS END=63280192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 63280193 . A . PASS END=63280195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 63280196 . T . PASS END=63280196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 63280197 . C . PASS END=63280216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 63280217 . A . PASS END=63280217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 63280218 . T . PASS END=63280221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 63280222 . G . PASS END=63280222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 63281067 . T . PASS END=63281072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 63281073 . T . LowGQ END=63281073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 63281074 . T . PASS END=63281078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:4,0 chr2 63281079 . T . LowGQ END=63281086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,78:0,0,82:3,0 chr2 63281087 . G . PASS END=63281103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:6,0 chr2 63281104 . C . PASS END=63281113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 63281114 . G . PASS END=63281122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:13,0 chr2 63281123 . C . PASS END=63281123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 63281124 . T . PASS END=63281124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:13,0 chr2 63281125 . C . PASS END=63281126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 63281127 . A . PASS END=63281129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 63281130 . G . PASS END=63281130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 63281131 . C . PASS END=63281131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 63281132 . G . PASS END=63281132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 63281133 . G . PASS END=63281191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,520:0,41,255:19,0 chr2 63281192 . G . PASS END=63281203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr2 63281204 . G . PASS END=63281204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 63281205 . G . PASS END=63281223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,821:0,66,255:25,0 chr2 63281224 . G . PASS END=63281231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1054:0,87,255:30,0 chr2 63281232 . C . PASS END=63281232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 63281233 . T . PASS END=63281310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1097:0,83,255:34,0 chr2 63281311 . A . PASS END=63281311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,983:0,54,255:29,0 chr2 63281312 . C . PASS END=63281329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr2 63281330 . C . PASS END=63281333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,972:0,70,255:26,0 chr2 63282636 . G . PASS END=63282639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,325:0,27,255:9,0 chr2 63282640 . G . PASS END=63282640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 63282641 . G . PASS END=63282667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,272:0,27,255:9,0 chr2 63282668 . C . PASS END=63282668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 63282669 . C . PASS END=63282679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 63282680 . G . PASS END=63282686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 63282687 . A . PASS END=63282687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 63282688 . G . PASS END=63282688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 63282689 . C . PASS END=63282690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 63282691 . G . PASS END=63282711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:12,0 chr2 63282712 . A . PASS END=63282712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 63282713 . G . PASS END=63282718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr2 63282719 . G . PASS END=63282726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 63282727 . C . PASS END=63282728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 63282729 . G . PASS END=63282729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 63282730 . T . PASS END=63282737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 63282738 . A . PASS END=63282738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:12,0 chr2 63282739 . G . PASS END=63282740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 63282741 . T . PASS END=63282741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 63282742 . C . PASS END=63282745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 63282746 . C . PASS END=63282772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,470:0,42,255:15,0 chr2 63282773 . G . PASS END=63282776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 63282777 . G . PASS END=63282798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr2 63282799 . C . PASS END=63282799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 63282800 . C . PASS END=63282815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:18,0 chr2 63282816 . A . PASS END=63282816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 63282817 . G . PASS END=63282881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,615:0,51,255:18,0 chr2 63282882 . T . PASS END=63282882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 63282883 . C . PASS END=63282960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:18,0 chr2 63282961 . C . PASS END=63282982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,443:0,36,255:13,0 chr2 63282983 . G . PASS END=63282998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,341:0,27,255:9,0 chr2 63282999 . T . PASS END=63283004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 63283005 . C . PASS END=63283007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 63283008 . C . PASS END=63283009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 63283010 . C . PASS END=63283011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 63283012 . C . PASS END=63283042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 63283043 . C . PASS END=63283084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,558:0,45,255:18,0 chr2 63283085 . A . PASS END=63283106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,709:0,63,255:23,0 chr2 63283107 . T . PASS END=63283107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 63283108 . C . PASS END=63283121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr2 63283122 . G . PASS END=63283122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 63283123 . T . PASS END=63283123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 63283124 . G . PASS END=63283124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,786:0,33,255:22,0 chr2 63283125 . G . PASS END=63283132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr2 63283133 . C . PASS END=63283140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:29,0 chr2 63283141 . T . PASS END=63283142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 63283143 . G . PASS END=63283143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 63283144 . C . PASS END=63283177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1178:0,83,255:39,0 chr2 63283178 . C G, 49.60 PASS DP=41;MQ=249.62;MQRankSum=5.451;ReadPosRankSum=3.229;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,19,0:0.463,0.000:41:15,8,0:7,11,0:48:84,0,50,672,758,1430:255,0,255:21,0:4.9596e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,12,7:13,9,11,8 chr2 63283179 . A . PASS END=63283215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,108,1660:0,108,255:40,0 chr2 63283216 . A . PASS END=63283407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:84:35:0,84,1256:0,87,255:40,0 chr2 63283408 . T . PASS END=63283419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:27:0,60,900:0,65,255:23,0 chr2 63283420 . A . PASS END=63283420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 63283421 . C . PASS END=63283427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 63283428 . T . PASS END=63283428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 63283429 . C . PASS END=63283439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 63283440 . C . PASS END=63283451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr2 63348956 . T . PASS END=63349191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,107,1800:0,107,255:40,0 chr2 63380049 . C . PASS END=63380080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:89:0,120,1800:0,237,255:40,0 chr2 63380093 . A . PASS END=63380093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr2 63380616 . T . PASS END=63380616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 63380630 . C . PASS END=63380709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,188,255:40,0 chr2 63401804 . C . PASS END=63401819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,848:0,66,255:25,0 chr2 63401820 . T C, 49.92 PASS DP=25;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=3.019;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:3,10,0:10,2,0:48:85,0,50,429,447,876:255,0,255:13,0:4.9916e+01,6.6010e-05,5.3000e+01,4.2924e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,2,8,4:3,10,8,4 chr2 63401821 . T . PASS END=63401821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr2 63401822 . C . PASS END=63401823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 63401824 . G . PASS END=63401825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 63401826 . A . PASS END=63401826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 63401827 . T . PASS END=63401831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 63401832 . T . PASS END=63401832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 63401833 . G . PASS END=63401840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1030:0,84,255:29,0 chr2 63401841 . A . PASS END=63401843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 63401844 . T . PASS END=63401857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1080:0,90,255:33,0 chr2 63401858 . G . PASS END=63401872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1117:0,82,255:34,0 chr2 63401873 . G . PASS END=63401873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:31,0 chr2 63401874 . T . PASS END=63401893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1150:0,83,255:33,0 chr2 63401894 . T . PASS END=63401910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr2 63401911 . A . PASS END=63401911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,974:0,54,255:25,0 chr2 63401912 . C . PASS END=63401945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,894:0,64,255:26,0 chr2 63401946 . C . PASS END=63401951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:17,0 chr2 63401952 . A . PASS END=63401953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:13,0 chr2 63401954 . G . PASS END=63401967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,675:0,44,255:18,0 chr2 63401969 . T . PASS END=63401969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 63436774 . T . PASS END=63436791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:104:0,120,1800:0,255,255:40,0 chr2 63485556 . C . PASS END=63485599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,156,255:40,0 chr2 63486442 . C . PASS END=63486466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,144,255:40,0 chr2 63486467 . A . PASS END=63486544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:43:0,105,1575:0,118,255:40,0 chr2 63486547 . G . PASS END=63486547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 63535972 . C . PASS END=63536008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:96:0,120,1800:0,255,255:40,0 chr2 63536009 . A . PASS END=63536013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:90:0,120,1800:0,247,255:40,0 chr2 63540383 . C . PASS END=63540446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:56:0,120,1800:0,152,255:40,0 chr2 63596587 . T . PASS END=63596593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,172,255:40,0 chr2 63605521 . C . PASS END=63605530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1286:0,92,255:40,0 chr2 63605531 . G . PASS END=63605644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,108,255:40,0 chr2 63605647 . G . PASS END=63605647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 63609041 . C . PASS END=63609042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 63609043 . T . PASS END=63609046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr2 63609047 . T . PASS END=63609047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 63609048 . C . PASS END=63609054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,845:0,66,255:25,0 chr2 63609055 . G . PASS END=63609060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:25,0 chr2 63609061 . T . PASS END=63609061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr2 63609062 . T . PASS END=63609064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 63609065 . G . PASS END=63609216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1039:0,82,255:40,0 chr2 63609217 . C . PASS END=63609217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:27,0 chr2 63609218 . G . PASS END=63609229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr2 63609233 . T . PASS END=63609233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 63631183 . C . PASS END=63631191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 63631192 . A . PASS END=63631197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1174:0,86,255:33,0 chr2 63631198 . G . PASS END=63631198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr2 63631199 . C . PASS END=63631483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:32:0,85,1222:0,85,255:40,0 chr2 63631484 . A . PASS END=63631484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1269:0,70,255:38,0 chr2 63631485 . A . PASS END=63631753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:80:29:0,80,1161:0,80,255:40,0 chr2 63631754 . A . PASS END=63631755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 63631756 . C . PASS END=63631759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 63631760 . T . PASS END=63631764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:29:0,63,945:0,71,255:27,0 chr2 63631765 . C . PASS END=63631765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr2 63631766 . C . PASS END=63631769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 63631770 . T . PASS END=63631776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 63631777 . G . PASS END=63631778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 63631779 . A . PASS END=63631792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:18,0 chr2 63660879 . C . PASS END=63660884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 63660885 . T . PASS END=63660888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:21,0 chr2 63660889 . C . PASS END=63660890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 63660891 . T . PASS END=63660896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 63660897 . A . PASS END=63660897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 63660898 . T . PASS END=63660918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,747:0,69,255:26,0 chr2 63660919 . G . PASS END=63660972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1156:0,83,255:37,0 chr2 63660973 . A . PASS END=63660973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:35,0 chr2 63660974 . G . PASS END=63661047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:36:0,92,1300:0,92,255:40,0 chr2 63661048 . C . PASS END=63661048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr2 63661049 . C . PASS END=63661049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 63661050 . G . PASS END=63661050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1088:0,58,255:25,0 chr2 63661051 . G . PASS END=63661051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 63661052 . G . PASS END=63661070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,893:0,64,255:25,0 chr2 63664553 . A . PASS END=63664553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 63664555 . C . PASS END=63664688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:60:0,120,1800:0,127,255:40,0 chr2 63664996 . C . PASS END=63665017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:115:0,120,1800:0,255,255:40,0 chr2 63666882 . G . PASS END=63666882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 63666891 . C . PASS END=63666891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 63666892 . A . PASS END=63666892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:26,0 chr2 63666893 . T . PASS END=63667005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1215:0,90,255:40,0 chr2 63711738 . C . PASS END=63711797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,144,255:40,0 chr2 63712051 . C . PASS END=63712121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,120,1800:0,138,255:40,0 chr2 63713674 . A . PASS END=63713674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,224,255:40,0 chr2 63713676 . A . PASS END=63713721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,196,255:40,0 chr2 63714570 . A . PASS END=63714570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,252,255:40,0 chr2 63714580 . C . PASS END=63714628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:81:0,120,1800:0,223,255:40,0 chr2 63719990 . C . PASS END=63720075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:58:0,120,1800:0,158,255:40,0 chr2 63798509 . C . PASS END=63798511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,255,255:40,0 chr2 63798695 . T . PASS END=63798760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,104,1800:0,104,255:40,0 chr2 63815318 . G . PASS END=63815318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 63815331 . C . PASS END=63815405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:32:0,90,1305:0,96,255:40,0 chr2 63815498 . A . PASS END=63815498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 63815501 . C . PASS END=63815501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 63815514 . C . PASS END=63815514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 63815581 . C . PASS END=63815581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 63815632 . G . PASS END=63815632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 63815706 . C . PASS END=63815706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 63815726 . G . PASS END=63815726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr2 63816178 . A . PASS END=63816180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr2 63816462 . A . PASS END=63816510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:44:0,112,1800:0,112,255:40,0 chr2 63816511 . A . PASS END=63816511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1446:0,77,255:40,0 chr2 63816512 . C . PASS END=63816518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,117,1755:0,129,255:40,0 chr2 63820757 . A . PASS END=63820762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,120,1800:0,131,255:40,0 chr2 63821622 . T . PASS END=63821720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,111,1621:0,119,255:40,0 chr2 63822557 . C . PASS END=63822560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1133:0,90,255:32,0 chr2 63822561 . T . PASS END=63822561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:31,0 chr2 63822562 . A . PASS END=63822651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1127:0,82,255:40,0 chr2 63822652 . A . PASS END=63822653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1080:0,85,255:24,0 chr2 63824533 . A . PASS END=63824533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 63824534 . T . PASS END=63824545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:29,0 chr2 63824546 . A . PASS END=63824547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 63824548 . A . PASS END=63824560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1044:0,90,255:30,0 chr2 63824561 . T . PASS END=63824561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 63824562 . G . PASS END=63824562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 63824563 . C . PASS END=63824563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 63824564 . C . PASS END=63824569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 63824570 . A . PASS END=63824570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:26,0 chr2 63824571 . G . PASS END=63824587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1141:0,80,255:32,0 chr2 63824588 . T . PASS END=63824588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr2 63824589 . C . PASS END=63824601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1133:0,90,255:30,0 chr2 63824602 . T . PASS END=63824602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 63824603 . G . PASS END=63824668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:30:0,81,1072:0,81,255:36,0 chr2 63824669 . G . PASS END=63824695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,886:0,61,255:25,0 chr2 63824696 . G . PASS END=63824696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 63824697 . A . PASS END=63824700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,834:0,75,255:25,0 chr2 63824701 . C . PASS END=63824701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 63824702 . A . PASS END=63824702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 63824703 . G . PASS END=63824703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 63824704 . T . PASS END=63824708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 63826304 . G . PASS END=63826426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:34:0,89,1270:0,89,255:40,0 chr2 63831830 . A . PASS END=63831833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 63831834 . C . PASS END=63832006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:33:0,96,1203:0,99,255:40,1 chr2 63832414 . A . PASS END=63832520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1086:0,84,255:40,0 chr2 63832521 . C . PASS END=63832521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr2 63832522 . C . PASS END=63832523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:28:0,49,986:0,49,255:26,0 chr2 63832524 . A . PASS END=63832524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 63832525 . G . PASS END=63832527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 63833073 . G . PASS END=63833162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:51:0,120,1800:0,137,255:40,0 chr2 63833996 . A . PASS END=63834178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:53:0,113,1800:0,113,255:40,0 chr2 64069320 . A . PASS END=64069327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:65:0,120,1800:0,161,255:40,0 chr2 64069328 . A . LowGQ END=64069328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,10:67:0:67:0,0,1588:2,0,255:40,0 chr2 64069329 . T . PASS END=64069338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,162,255:40,0 chr2 64069526 . A . PASS END=64069571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:55:0,120,1800:0,149,255:40,0 chr2 64069673 . G . PASS END=64069694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1266:0,91,255:35,0 chr2 64069695 . G . PASS END=64069706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:31,0 chr2 64069707 . G . PASS END=64069707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:26,0 chr2 64069708 . G . PASS END=64069709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 64069710 . A . PASS END=64069710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr2 64069711 . G . PASS END=64069731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,814:0,63,255:25,0 chr2 64069732 . G A, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,13,0:0,8,0:60:148,63,0,814,63,814:255,63,0:0,0:1.1020e+02,6.0204e+01,4.1418e-06,4.5000e+02,9.4974e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,12:0,0,7,14 chr2 64069733 . G . PASS END=64069733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 64082553 . A . PASS END=64082559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 64083439 . G . PASS END=64083553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,126,255:40,0 chr2 64083554 . C . PASS END=64083567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,140,255:40,0 chr2 64083922 . A . PASS END=64083954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,161,255:40,0 chr2 64084963 . C . PASS END=64085050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:38:0,98,1333:0,98,255:40,0 chr2 64085051 . A . PASS END=64085051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr2 64085052 . G . PASS END=64085066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1235:0,88,255:36,0 chr2 64085067 . T . PASS END=64085067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:30,0 chr2 64085068 . T . PASS END=64085070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1272:0,92,255:33,0 chr2 64089975 . G . PASS END=64089983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:40:0,92,1435:0,92,255:39,0 chr2 64109600 . A . PASS END=64109600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 64109601 . T . PASS END=64109601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 64109602 . T . PASS END=64109609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr2 64109610 . A . PASS END=64109610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 64109611 . T . PASS END=64109618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:19,0 chr2 64109619 . T . PASS END=64109627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:22,0 chr2 64109628 . G . PASS END=64109628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 64109629 . G . PASS END=64109630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 64109631 . G . PASS END=64109631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 64109632 . C . PASS END=64109633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 64109634 . T . PASS END=64109634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 64109635 . G . PASS END=64109639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr2 64109640 . A . PASS END=64109644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 64109645 . A . PASS END=64109646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:64:27:0,64,872:0,64,255:28,0 chr2 64109647 . A . PASS END=64109651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr2 64109652 . C . PASS END=64109653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 64109654 . G . PASS END=64109757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1133:0,81,255:40,0 chr2 64109758 . T . PASS END=64109760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 64109761 . G . PASS END=64109762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 64109763 . A . PASS END=64109779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:24,0 chr2 64109780 . A . PASS END=64109780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr2 64109781 . T . PASS END=64109781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 64109782 . T . PASS END=64109782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 64109783 . G . PASS END=64109785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 64111094 . C . PASS END=64111227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:65:0,120,1800:0,162,255:40,2 chr2 64112723 . G . PASS END=64112723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr2 64112724 . T . PASS END=64112731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 64112732 . G . PASS END=64112739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 64112740 . A . PASS END=64112740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 64112741 . A . PASS END=64112742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:15,0 chr2 64112743 . A . PASS END=64112743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 64112744 . A . PASS END=64112749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr2 64112750 . A . PASS END=64112758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,574:0,48,255:18,0 chr2 64112759 . A . PASS END=64112770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:24,0 chr2 64112771 . G . PASS END=64113017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1028:0,90,255:40,0 chr2 64113018 . A . PASS END=64113020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:23,0 chr2 64113475 . G . PASS END=64113672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:33:0,86,1219:0,86,255:40,0 chr2 64114536 . A . PASS END=64114778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:32:0,80,1147:0,80,255:40,0 chr2 64117215 . G . PASS END=64117221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,146,255:40,0 chr2 64117222 . A . PASS END=64117319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:54:0,120,1800:0,146,255:40,0 chr2 64118254 . G . PASS END=64118361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,164,255:40,0 chr2 64120564 . T . PASS END=64120661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:84:44:0,84,1260:0,112,255:40,0 chr2 64120662 . T . PASS END=64120669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:30:0,69,1035:0,90,255:26,0 chr2 64124630 . C . PASS END=64124724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,116,1800:0,116,255:40,0 chr2 64126608 . C . PASS END=64126715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,115,1800:0,115,255:40,0 chr2 64139479 . C . PASS END=64139559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,113,1590:0,113,255:40,0 chr2 64139674 . C . PASS END=64139786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:50:0,104,1763:0,104,255:40,0 chr2 64139787 . A . PASS END=64139793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,130,255:40,0 chr2 64139794 . A . PASS END=64139794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:61:49:0,61,1530:0,61,255:40,0 chr2 64139795 . G . PASS END=64139795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 64140357 . C . PASS END=64140444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,143,255:40,0 chr2 64141033 . C . PASS END=64141059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,99,1485:0,111,255:39,0 chr2 64141316 . C . PASS END=64141421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:44:0,111,1665:0,132,255:40,0 chr2 64144034 . C . PASS END=64144097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:94:55:0,94,1800:0,94,255:40,0 chr2 64147017 . C . PASS END=64147129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:45:0,91,1598:0,91,255:40,0 chr2 64147580 . C . PASS END=64147696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:50:0,120,1800:0,120,255:40,0 chr2 64147697 . A . PASS END=64147697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,5:64:43:64:0,43,2029:0,43,255:40,0 chr2 64147698 . A . PASS END=64147761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,113,1572:0,113,255:40,0 chr2 64148340 . C . PASS END=64148469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,99,1485:0,102,255:40,0 chr2 64160807 . A . PASS END=64161147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:44:0,116,1598:0,116,255:40,0 chr2 64169599 . C . PASS END=64169695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,159,255:40,0 chr2 64171734 . T . PASS END=64171789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:105:0,120,1800:0,255,255:40,0 chr2 64174517 . C . PASS END=64174624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:67:0,120,1800:0,198,255:40,0 chr2 64176171 . C . PASS END=64176297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:50:0,120,1800:0,129,255:40,0 chr2 64189192 . C . PASS END=64189202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr2 64189203 . A . PASS END=64189203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 64189204 . A . PASS END=64189205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 64189206 . G . PASS END=64189561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:27:0,81,1002:0,81,255:40,0 chr2 64189562 . C . PASS END=64189564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 64189565 . G . PASS END=64189568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 64189569 . A . PASS END=64189569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 64189570 . T . PASS END=64189572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 64189573 . C . PASS END=64189573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr2 64189574 . T . PASS END=64189574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 64189575 . C . PASS END=64189577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 64192969 . C . PASS END=64193100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:36:0,100,1283:0,100,255:40,0 chr2 64196091 . C . PASS END=64196125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:70:0,120,1800:0,185,255:40,0 chr2 64199300 . C . PASS END=64199378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:78:0,120,1800:0,217,255:40,0 chr2 64202120 . C . PASS END=64202146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:97:0,120,1800:0,255,255:40,0 chr2 64208780 . C . PASS END=64208785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 64208786 . G . PASS END=64208800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,703:0,63,255:26,0 chr2 64208801 . T . PASS END=64208801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:25,0 chr2 64208802 . A . PASS END=64208802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,954:0,78,255:26,0 chr2 64208803 . C . PASS END=64208991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:30:0,80,986:0,80,255:40,0 chr2 64208992 . A . PASS END=64208993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 64208994 . G . PASS END=64208994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 64208995 . G . PASS END=64208997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 64208998 . C . PASS END=64209001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:28:0,54,810:0,84,255:18,0 chr2 64209002 . A . PASS END=64209002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 64209003 . T . PASS END=64209003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:19,0 chr2 64209004 . A . PASS END=64209004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,900:0,73,255:19,0 chr2 64209005 . T . PASS END=64209021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,654:0,46,255:19,0 chr2 64210998 . C . PASS END=64210998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 64210999 . T . PASS END=64211012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:27,0 chr2 64211013 . G . PASS END=64211014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 64211015 . C . PASS END=64211015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:28,0 chr2 64211016 . A . PASS END=64211018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,994:0,60,255:30,0 chr2 64211019 . C . PASS END=64211030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1167:0,85,255:36,0 chr2 64211031 . A . PASS END=64211113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1178:0,83,255:40,0 chr2 64211114 . G . PASS END=64211133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,937:0,60,255:26,0 chr2 64321836 . T . PASS END=64321837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr2 64321838 . A . PASS END=64321838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr2 64321839 . G . PASS END=64321966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:35:0,90,1366:0,90,255:40,0 chr2 64321967 . T . PASS END=64321967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1357:0,62,255:34,0 chr2 64321968 . T . PASS END=64322379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:81:36:0,81,1227:0,81,255:40,0 chr2 64322380 . A . PASS END=64322390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1039:0,74,255:26,0 chr2 64322391 . T . PASS END=64322393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 64322394 . A . PASS END=64322394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:26,0 chr2 64322395 . A . PASS END=64322397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 64322398 . T . PASS END=64322398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:26,0 chr2 64322399 . C . PASS END=64322401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 64322402 . C . PASS END=64322402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 64323259 . C . PASS END=64323266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,858:0,64,255:26,0 chr2 64323267 . C . PASS END=64323409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,976:0,81,255:40,0 chr2 64323410 . A . PASS END=64323410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1427:0,74,255:33,0 chr2 64323411 . T . PASS END=64323447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:37:0,101,1362:0,101,255:38,0 chr2 64323547 . C . PASS END=64323702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:91:36:0,91,1274:0,91,255:40,2 chr2 64323703 . A . PASS END=64323744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,102,1530:0,114,255:40,0 chr2 64327532 . C . PASS END=64327543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,114,1710:0,120,255:40,0 chr2 64327544 . G T, 43.66 PASS DP=46;MQ=250.00;MQRankSum=5.598;ReadPosRankSum=-2.230;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,17,0:0.370,0.000:46:14,12,0:15,5,0:43:78,0,50,543,1000,1543:255,0,255:27,0:4.3658e+01,2.0890e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,12,5:11,18,9,8 chr2 64327545 . G . PASS END=64327591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,120,1800:0,125,255:40,0 chr2 64327592 . T C, 45.40 PASS DP=55;MQ=249.78;MQRankSum=6.176;ReadPosRankSum=4.894;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,21,0:0.382,0.000:55:17,12,0:17,9,0:45:80,0,50,751,1187,1938:255,0,255:31,0:4.5396e+01,1.4703e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,19,11,10:18,16,12,9 chr2 64327593 . A . PASS END=64327629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:40:0,107,1504:0,107,255:40,0 chr2 64327630 . T . PASS END=64327633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 64331688 . C . PASS END=64331690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr2 64331835 . C . PASS END=64331868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:49:0,93,1662:0,93,255:40,0 chr2 64331869 . G . PASS END=64331964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:45:0,108,1620:0,135,255:40,0 chr2 64335374 . C . PASS END=64335444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,3:64:99:58:0,120,1800:0,141,255:40,0 chr2 64681680 . A . PASS END=64681715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,615:0,41,255:19,0 chr2 64682478 . A . PASS END=64682545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:47:0,97,1571:0,97,255:40,0 chr2 64682546 . A . PASS END=64682547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr2 64682548 . T . PASS END=64682548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1565:0,74,255:39,0 chr2 64682549 . G . PASS END=64682549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 64682723 . A . PASS END=64682811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:61:0,120,1800:0,171,255:40,0 chr2 64683407 . T . PASS END=64683408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1181:0,99,255:33,0 chr2 64683409 . A . PASS END=64683409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:31,0 chr2 64683410 . T . PASS END=64683599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:97:33:0,97,1166:0,97,255:40,0 chr2 64685419 . G . PASS END=64685562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:57:0,120,1800:0,155,255:40,0 chr2 64778609 . A . PASS END=64780466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:89:34:0,89,1217:0,89,255:40,2 chr2 64780467 . C . PASS END=64780467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:35,0 chr2 64780468 . G . PASS END=64780470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:32,0 chr2 64780471 . C . PASS END=64780471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr2 64780472 . A . PASS END=64780485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:62:26:0,62,953:0,62,255:26,0 chr2 64780486 . A . PASS END=64780486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:24,0 chr2 64780487 . A . PASS END=64780515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:23:0,64,909:0,64,255:24,0 chr2 64780516 . T . PASS END=64780517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,724:0,55,255:23,0 chr2 64780518 . T . PASS END=64780519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 64780520 . C . PASS END=64780520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 64780521 . A . PASS END=64780540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,862:0,61,255:24,0 chr2 64780541 . C . LowGQ END=64780541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,665:3,0,255:18,0 chr2 64780542 . A . PASS END=64780543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 64794696 . A . PASS END=64794702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1046:0,83,255:33,0 chr2 64794703 . T . PASS END=64794703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:30,0 chr2 64794704 . A . PASS END=64794708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:34,0 chr2 64794709 . A . PASS END=64794709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1162:0,72,255:32,0 chr2 64794710 . C . PASS END=64794711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:35:0,97,1329:0,97,255:36,0 chr2 64794712 . G . PASS END=64794712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1327:0,43,255:37,0 chr2 64794713 . C . PASS END=64794719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1405:0,104,255:40,0 chr2 64794720 . C . PASS END=64794720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:51:41:0,51,1301:0,51,255:38,0 chr2 64794721 . G . PASS END=64794838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1164:0,84,255:40,0 chr2 64794839 . T . PASS END=64794839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1070:0,69,255:28,0 chr2 64794840 . G . PASS END=64794840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 64794841 . A . PASS END=64794847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,76,255:26,0 chr2 64796226 . G . PASS END=64796336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:29:0,82,1056:0,82,255:40,0 chr2 64796337 . A . PASS END=64796342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1170:0,64,255:32,0 chr2 64796343 . C . PASS END=64796344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 64796345 . G . PASS END=64796345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:27,0 chr2 64796346 . A . PASS END=64796346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:27,0 chr2 64796347 . A . PASS END=64796348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 64796349 . C . PASS END=64796349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 64796350 . A . PASS END=64796350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 64796351 . T . PASS END=64796351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:25,0 chr2 64796352 . T . PASS END=64796352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 64796757 . C . PASS END=64796809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,170,255:40,0 chr2 64796810 . A . PASS END=64796813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,174,255:40,0 chr2 64800080 . G . PASS END=64800202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:47:0,114,1710:0,125,255:40,0 chr2 64806620 . G . PASS END=64806680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,111,1665:0,119,255:40,0 chr2 64808234 . T . PASS END=64808407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:39:0,84,1305:0,84,255:40,0 chr2 64812556 . G . PASS END=64812670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,96,255:40,0 chr2 64812671 . A . PASS END=64812679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,71,255:26,0 chr2 64819019 . T . PASS END=64819162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:92:35:0,92,1280:0,92,255:40,0 chr2 64819163 . C . PASS END=64819163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:31,0 chr2 64819164 . G . PASS END=64819167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,89,255:29,0 chr2 64819168 . A . PASS END=64819169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1127:0,66,255:29,0 chr2 64863061 . T . PASS END=64863070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,892:0,61,255:26,0 chr2 64863071 . A . PASS END=64863314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:27:0,81,986:0,81,255:40,0 chr2 64863315 . T . PASS END=64863316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:29,0 chr2 64863317 . T . PASS END=64863319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 64863320 . A . PASS END=64863320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr2 64863321 . A . PASS END=64863323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:32,0 chr2 64863324 . T . PASS END=64863324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 64863325 . C . PASS END=64863336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr2 64863337 . G . PASS END=64863337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:29,0 chr2 64863338 . T . PASS END=64863343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 64863344 . A . PASS END=64863344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:27,0 chr2 64863345 . G . PASS END=64863351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:27,0 chr2 64863352 . G . PASS END=64863353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1133:0,65,255:27,0 chr2 64863354 . C . PASS END=64863354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 64863355 . A . PASS END=64863355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 64863356 . T . PASS END=64863356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,992:0,43,255:24,0 chr2 64863357 . C . PASS END=64863357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 64863358 . T . PASS END=64863362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 64863363 . G . PASS END=64863384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:25:0,62,923:0,62,255:26,0 chr2 64863385 . T . PASS END=64863417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:29,0 chr2 64863418 . C . PASS END=64863430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:26,0 chr2 64863431 . G . PASS END=64863431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr2 64863432 . C . PASS END=64863450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,770:0,66,255:23,0 chr2 64863451 . G . PASS END=64863451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 64863452 . G . PASS END=64863461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:25,0 chr2 64863462 . T . PASS END=64863462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr2 64863463 . G . PASS END=64863479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,853:0,66,255:22,0 chr2 64863480 . T . PASS END=64863480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,648:0,49,255:21,0 chr2 64863481 . C . PASS END=64863505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:24,0 chr2 64863506 . T . PASS END=64863506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 64863507 . C . PASS END=64863507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 64863508 . C . PASS END=64863508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr2 64863509 . T . PASS END=64863512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 64863513 . C . PASS END=64863513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 64863514 . T . PASS END=64863518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 64863519 . A . PASS END=64863520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr2 64863521 . A . PASS END=64863531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 64863532 . T . PASS END=64863542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 64863543 . T . PASS END=64863548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 64863549 . C . PASS END=64863549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 64863550 . C . PASS END=64863623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,776:0,63,255:26,0 chr2 64863624 . C . PASS END=64863624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 64863625 . C . PASS END=64863632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 64863633 . G . PASS END=64863633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 64863634 . C . PASS END=64863646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,923:0,72,255:25,0 chr2 64863647 . A . PASS END=64863647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 64863648 . G . PASS END=64863648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 64863649 . G . PASS END=64863649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr2 64863650 . T . PASS END=64863656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr2 64863657 . G . PASS END=64863658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 64863659 . T . PASS END=64863720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:26,0 chr2 64863721 . C . PASS END=64863721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 64863722 . T . PASS END=64863724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:25,0 chr2 64863725 . G . PASS END=64863726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 64863727 . G . PASS END=64863727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 64863728 . G . PASS END=64863731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 64863732 . G . PASS END=64863732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 64863733 . C . PASS END=64863747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr2 64863748 . G . PASS END=64863748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 64863749 . A . PASS END=64863753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 64863754 . G . PASS END=64863754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:26,0 chr2 64863755 . G . PASS END=64863755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 64863756 . G . PASS END=64863756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,886:0,43,255:26,0 chr2 64863757 . C . PASS END=64863758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:29,0 chr2 64863759 . T . PASS END=64863759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,878:0,54,255:27,0 chr2 64863760 . C . PASS END=64863766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1062:0,87,255:29,0 chr2 64863767 . C . PASS END=64863767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 64863768 . C . PASS END=64863771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 64863772 . C . PASS END=64863772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 64863773 . T . PASS END=64863774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 64863775 . T . PASS END=64863775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:28,0 chr2 64863776 . T . PASS END=64863780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 64863781 . T . PASS END=64863784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1108:0,74,255:26,0 chr2 64863785 . T . PASS END=64863794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr2 64863795 . G . PASS END=64863795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:26,0 chr2 64863796 . C . PASS END=64863796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 64863797 . C . PASS END=64863806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1048:0,76,255:26,0 chr2 64863807 . T . PASS END=64863813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:29,0 chr2 64863814 . T . PASS END=64863814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:27,0 chr2 64863815 . A . PASS END=64863838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 64863839 . T . PASS END=64863839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 64863840 . C . PASS END=64863844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr2 64863845 . A . PASS END=64863847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 64863848 . G . PASS END=64863851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 64863852 . T . PASS END=64863855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 64863856 . G . PASS END=64863876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:31,0 chr2 64863877 . A . PASS END=64863877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr2 64863878 . A . PASS END=64863886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr2 64863887 . A . PASS END=64863887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:29,0 chr2 64863888 . T . PASS END=64864009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:33:0,90,1350:0,94,255:40,0 chr2 64896420 . T . PASS END=64896436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:71:0,120,1800:0,189,255:40,0 chr2 65216777 . C . PASS END=65216797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 65216798 . C A, 41.37 PASS DP=13;MQ=250.00;MQRankSum=2.451;ReadPosRankSum=2.451;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,3,0:0.231,0.000:13:4,1,0:6,2,0:41:76,0,50,107,358,465:77,0,255:9,0:4.1366e+01,3.3886e-04,5.3000e+01,1.0733e+02,3.9244e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,2,1:5,5,2,1 chr2 65216799 . A . PASS END=65216814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr2 65216815 . G . PASS END=65216817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 65216818 . C . PASS END=65216818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 65216819 . T . PASS END=65216829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 65216830 . C . PASS END=65216830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 65216831 . T . PASS END=65216831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 65216832 . G . PASS END=65216832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 65216833 . C . PASS END=65216835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 65216836 . C . PASS END=65216840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 65216841 . C . PASS END=65216842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 65216843 . C . PASS END=65216846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 65216847 . G . PASS END=65216852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 65216853 . G . PASS END=65216866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 65216867 . A . PASS END=65216867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 65216868 . C . PASS END=65216870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 65216871 . G . PASS END=65216871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 65216872 . C . PASS END=65216872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 65216873 . A . PASS END=65216875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,404:0,22,255:9,0 chr2 65216876 . G . PASS END=65216877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 65216878 . G . PASS END=65216878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr2 65216879 . T . PASS END=65216881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 65216882 . C . PASS END=65216882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 65216883 . G . PASS END=65216883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 65216884 . C . PASS END=65216886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:10:0,20,360:0,20,255:9,0 chr2 65216887 . G . PASS END=65216889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 65216890 . T . PASS END=65216890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 65216891 . C . PASS END=65216907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:11,0 chr2 65216908 . T . PASS END=65216908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 65216909 . G . PASS END=65216914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 65216915 . G . PASS END=65216915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 65216916 . C . PASS END=65216949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 65216950 . T A, 0.02 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.751;ReadPosRankSum=-0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:6,0,0:2,1,0:23:12,0,50,36,286,322:12,0,255:8,0:2.1393e-02,2.3087e+01,7.6087e+01,5.8869e+01,3.4422e+02,3.4824e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,3,0,1:5,3,1,0 chr2 65216951 . G . PASS END=65216957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 65216958 . G . PASS END=65216972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:13,0 chr2 65216973 . A . PASS END=65216974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 65216975 . C . PASS END=65216976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 65216977 . T . PASS END=65216977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr2 65216978 . G . PASS END=65216984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 65216985 . A . PASS END=65216986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 65216987 . G . PASS END=65216987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 65216988 . C . PASS END=65216988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 65216989 . A . PASS END=65216989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 65216990 . G . PASS END=65216997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 65216998 . A . PASS END=65217008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 65217009 . C . PASS END=65217024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 65217025 . T . PASS END=65217097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,520:0,41,255:19,0 chr2 65217098 . C . PASS END=65217105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 65217106 . T . PASS END=65217106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 65217107 . C . PASS END=65217130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:12,0 chr2 65217131 . C . PASS END=65217145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr2 65217146 . C . PASS END=65217165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr2 65217166 . C . PASS END=65217171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 65217172 . C . PASS END=65217204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,413:0,33,255:13,0 chr2 65217205 . C . PASS END=65217205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 65217206 . C . PASS END=65217231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,459:0,39,255:13,0 chr2 65217232 . A . PASS END=65217232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 65217233 . C . PASS END=65217239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 65217240 . C . PASS END=65217245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 65217246 . G . PASS END=65217249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 65217250 . C . PASS END=65217252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 65217253 . G . PASS END=65217259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,495:0,32,255:13,0 chr2 65217260 . T . PASS END=65217260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:9,0 chr2 65217261 . C . PASS END=65217262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 65217263 . T . PASS END=65217263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 65217264 . G . PASS END=65217269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:11,0 chr2 65217270 . A . PASS END=65217270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 65217271 . A . PASS END=65217275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 65217276 . A . PASS END=65217276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 65217277 . C . PASS END=65217299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 65217300 . G . PASS END=65217302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 65217303 . A . PASS END=65217303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 65217304 . G . PASS END=65217304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 65228582 . A . PASS END=65228624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,204,255:40,0 chr2 65231087 . T . PASS END=65231106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,143,255:40,0 chr2 65231107 . C . PASS END=65231149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:56:0,102,1800:0,102,255:40,0 chr2 65237731 . A . PASS END=65237897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:38:0,93,1395:0,114,255:40,0 chr2 65243574 . G . PASS END=65243807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:40:0,81,1365:0,81,255:40,0 chr2 65244823 . A . PASS END=65244823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1336:0,111,255:37,0 chr2 65245205 . C . PASS END=65245219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,803:0,69,255:26,0 chr2 65245220 . C . PASS END=65245220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 65245221 . T . PASS END=65245221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:25,0 chr2 65245222 . C . PASS END=65245222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 65245223 . T . PASS END=65245223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:27,0 chr2 65245224 . A . PASS END=65245226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr2 65245227 . A . PASS END=65245227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:29,0 chr2 65245228 . T . PASS END=65245232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1021:0,90,255:30,0 chr2 65245233 . T . PASS END=65245233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 65245234 . G . PASS END=65245282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:31:0,81,1105:0,81,255:39,0 chr2 65245283 . C . PASS END=65245283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr2 65245284 . C . PASS END=65245308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,100,1328:0,100,255:37,0 chr2 65245309 . A . PASS END=65245309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr2 65245310 . C . PASS END=65245359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1170:0,86,255:34,0 chr2 65245360 . A . PASS END=65245370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,992:0,68,255:25,0 chr2 65245371 . C . PASS END=65245371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:23,0 chr2 65245372 . T . PASS END=65245376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:23,0 chr2 65245377 . G . PASS END=65245377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 65245378 . C . PASS END=65245380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 65245381 . G . PASS END=65245381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr2 65245382 . A . PASS END=65245382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 65245383 . C . PASS END=65245383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 65245384 . A . PASS END=65245390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 65245391 . C . PASS END=65245391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 65245392 . A . PASS END=65245392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 65245393 . C . PASS END=65245393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 65245394 . C . PASS END=65245394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 65245395 . A . PASS END=65245397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 65245398 . C . PASS END=65245399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 65245679 . A . PASS END=65245814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,95,255:40,0 chr2 65248046 . G . PASS END=65248050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,474:0,36,255:13,0 chr2 65248051 . G . PASS END=65248051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 65248052 . G . PASS END=65248072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,620:0,41,255:19,0 chr2 65248073 . G . PASS END=65248073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 65248074 . G . PASS END=65248077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 65248078 . G . PASS END=65248100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 65248101 . C . PASS END=65248124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 65248125 . A . PASS END=65248146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,955:0,68,255:26,0 chr2 65248147 . T . PASS END=65248147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr2 65248148 . T . PASS END=65248151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 65248152 . G . PASS END=65248169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,962:0,78,255:26,0 chr2 65248170 . A . PASS END=65248175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 65248176 . A . PASS END=65248183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 65248184 . G . PASS END=65248185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 65248186 . C . PASS END=65248210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,789:0,64,255:26,0 chr2 65248211 . G . PASS END=65248280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,576:0,51,255:19,0 chr2 65296579 . A . PASS END=65296587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr2 65296588 . G . PASS END=65296588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 65296589 . G . PASS END=65296589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 65296590 . T . PASS END=65296590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 65296591 . G . PASS END=65296599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,963:0,84,255:29,0 chr2 65296600 . G . PASS END=65296600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 65296601 . C . PASS END=65296618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 65296619 . A . PASS END=65296619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 65296620 . A . PASS END=65296632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 65296633 . C . PASS END=65296634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1064:0,76,255:26,0 chr2 65296635 . G . PASS END=65296636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 65296637 . C . PASS END=65296637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 65296638 . C . PASS END=65296638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 65296639 . T . PASS END=65296639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 65296640 . A . PASS END=65296649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 65296650 . G . PASS END=65296650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 65296651 . A . PASS END=65296655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 65296656 . C . PASS END=65296657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr2 65296658 . G . PASS END=65296658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr2 65296659 . G . PASS END=65296660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 65296661 . A . PASS END=65296662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 65296663 . C . PASS END=65296672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 65296673 . A . PASS END=65296673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 65296674 . C . PASS END=65296678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr2 65296679 . C . PASS END=65296682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 65296683 . G . PASS END=65296688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 65296689 . G . PASS END=65296695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 65296696 . G . PASS END=65296696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr2 65296697 . A . PASS END=65296730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:18,0 chr2 65296731 . C . PASS END=65296760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:24,0 chr2 65296761 . A . PASS END=65296778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr2 65296779 . G . PASS END=65296797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1164:0,90,255:33,0 chr2 65296798 . G A, 49.93 PASS DP=33;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=1.675;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,16,0:0.485,0.000:33:8,7,0:9,9,0:48:85,0,50,572,608,1180:255,0,255:16,0:4.9932e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,9,7:5,12,12,4 chr2 65296799 . G . PASS END=65296835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:34,0 chr2 65296836 . C . PASS END=65296852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1250:0,102,255:34,0 chr2 65296853 . C . PASS END=65296853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:32,0 chr2 65296854 . T . PASS END=65296892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1186:0,83,255:33,0 chr2 65296893 . C . PASS END=65296912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:26,0 chr2 65296913 . T . PASS END=65296913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 65296914 . T . PASS END=65296930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 65296931 . G . PASS END=65296934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 65296935 . G . PASS END=65296935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 65298588 . G . PASS END=65298590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 65298591 . G . PASS END=65298591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:19,0 chr2 65298592 . A . PASS END=65298621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:25,0 chr2 65298622 . T . PASS END=65298622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 65298623 . C . PASS END=65298624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 65298625 . C . PASS END=65298628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 65298629 . G . PASS END=65298629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 65298630 . A . PASS END=65298631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 65298632 . T . PASS END=65298632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 65298633 . C . PASS END=65298633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 65298634 . T . PASS END=65298634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 65298635 . G . PASS END=65298741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1067:0,80,255:36,0 chr2 65298742 . A . PASS END=65298744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:25,0 chr2 65298745 . G . PASS END=65298747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 65298748 . C . PASS END=65298785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,839:0,69,255:24,0 chr2 65298786 . A . PASS END=65298786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 65298787 . G . PASS END=65298792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr2 65298793 . G . PASS END=65298793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 65298794 . T . PASS END=65298794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 65298795 . T . PASS END=65298796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 65298797 . C . PASS END=65298801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 65298802 . C . PASS END=65298806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 65298807 . C . PASS END=65298838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,615:0,40,255:19,0 chr2 65298839 . A G, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=2.106;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,11,0:0.579,0.000:19:2,6,0:6,5,0:48:85,0,49,394,252,645:255,0,231:7,0:5.0000e+01,7.1964e-05,5.1805e+01,3.9357e+02,2.8652e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,4,7:6,2,5,6 chr2 65298840 . G . PASS END=65298841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:18,0 chr2 65298842 . C . PASS END=65298842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 65298843 . A . PASS END=65298844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 65298845 . C . PASS END=65298845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 65298846 . A . PASS END=65298848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr2 65298849 . C . PASS END=65298851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 65298852 . C . PASS END=65298852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 65298853 . A . PASS END=65298858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 65298859 . A . PASS END=65298859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 65298860 . C . PASS END=65298861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 65298862 . A . PASS END=65298862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 65298863 . G . PASS END=65298865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 65298866 . G . PASS END=65298866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 65298867 . A . PASS END=65298867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,682:0,11,255:17,0 chr2 65298868 . G . PASS END=65298874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 65298875 . G . PASS END=65298875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 65298876 . C . PASS END=65298876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 65298877 . C . PASS END=65298888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 65298889 . C . PASS END=65298889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 65298890 . T . PASS END=65298895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 65298896 . C . PASS END=65298896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 65298897 . A . PASS END=65298899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 65298900 . G . PASS END=65298951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,645:0,54,255:19,0 chr2 65298952 . G . PASS END=65298955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 65298956 . A . PASS END=65298977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr2 65298978 . C . PASS END=65298978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 65298979 . C . PASS END=65299004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,645:0,54,255:19,0 chr2 65299005 . G . PASS END=65299005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 65299006 . C . PASS END=65299007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 65299008 . T . PASS END=65299015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,798:0,50,255:19,0 chr2 65299016 . A . PASS END=65299021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr2 65299022 . G . PASS END=65299045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:19,0 chr2 65299046 . G . PASS END=65299054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 65299055 . C . PASS END=65299055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr2 65299056 . T . PASS END=65299064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 65299065 . C . PASS END=65299065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 65299066 . C . PASS END=65299089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:24,0 chr2 65299090 . A . PASS END=65299093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 65299094 . C . PASS END=65299097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 65299098 . T . PASS END=65299098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:21,0 chr2 65299099 . C . PASS END=65299105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 65299106 . C . PASS END=65299107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 65299108 . G . PASS END=65299113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 65299114 . C . PASS END=65299125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,692:0,46,255:19,0 chr2 65299126 . A . PASS END=65299131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 65299132 . A . PASS END=65299132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,672:0,19,255:18,0 chr2 65299133 . T . PASS END=65299135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 65299136 . G . PASS END=65299141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:18,0 chr2 65299142 . C . PASS END=65299142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,680:0,33,255:16,0 chr2 65299143 . T . PASS END=65299147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,47,255:15,0 chr2 65299148 . T . PASS END=65299148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:15,0 chr2 65299149 . T . PASS END=65299159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 65299160 . G . PASS END=65299160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 65299161 . C . PASS END=65299174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:16,0 chr2 65299175 . C . PASS END=65299175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 65299176 . C . PASS END=65299177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 65299178 . A . PASS END=65299178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,507:0,20,255:15,0 chr2 65299179 . A . PASS END=65299183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr2 65299184 . C . PASS END=65299184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 65299185 . C . PASS END=65299185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 65299186 . T . PASS END=65299186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,456:0,20,255:14,0 chr2 65299187 . T . PASS END=65299188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 65299189 . A . PASS END=65299190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 65299191 . A . PASS END=65299194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 65299195 . G . PASS END=65299195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 65299196 . T . PASS END=65299200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 65299201 . C . PASS END=65299201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 65299202 . A . PASS END=65299202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 65299203 . G . PASS END=65299203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 65299204 . C . PASS END=65299210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 65299211 . T . PASS END=65299211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:13,0 chr2 65299212 . G . PASS END=65299215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 65299216 . T . PASS END=65299216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 65299217 . G . PASS END=65299218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 65299219 . A . PASS END=65299223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 65299224 . T . PASS END=65299231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 65299232 . A . PASS END=65299232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr2 65299233 . G . PASS END=65299234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,584:0,51,255:17,0 chr2 65299235 . C . PASS END=65299235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 65299236 . C . PASS END=65299245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 65299246 . T . PASS END=65299246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr2 65299247 . C . PASS END=65299251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr2 65299252 . T . PASS END=65299252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr2 65299253 . C . PASS END=65299253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 65299254 . T . PASS END=65299254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:16,0 chr2 65299255 . C . PASS END=65299257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 65299258 . C . PASS END=65299258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr2 65299259 . A . PASS END=65299262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 65299263 . A . PASS END=65299263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 65299264 . G . PASS END=65299275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 65299276 . C . PASS END=65299276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 65299277 . A . PASS END=65299302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,593:0,40,255:19,0 chr2 65299303 . C . PASS END=65299316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr2 65299317 . A . PASS END=65299317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr2 65299318 . C . PASS END=65299322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 65299323 . C . PASS END=65299323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 65299324 . T . PASS END=65299326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 65299327 . C . PASS END=65299327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr2 65299328 . A . PASS END=65299328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 65299329 . T . PASS END=65299329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr2 65299330 . T . PASS END=65299347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr2 65299348 . C . PASS END=65299350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,754:0,52,255:19,0 chr2 65299351 . G . PASS END=65299365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,906:0,62,255:23,0 chr2 65299366 . C . PASS END=65299366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 65299367 . C . PASS END=65299384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,856:0,61,255:24,0 chr2 65299385 . A . PASS END=65299385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr2 65299386 . C . PASS END=65299386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 65299387 . A . PASS END=65299387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 65299388 . G . PASS END=65299388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 65299389 . G . PASS END=65299389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:22,0 chr2 65299390 . G . PASS END=65299390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 65299391 . T . PASS END=65299391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 65299392 . G . PASS END=65299396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:24,0 chr2 65299397 . G . PASS END=65299397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 65299398 . G . PASS END=65299406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,833:0,62,255:24,0 chr2 65299407 . T . PASS END=65299407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:23,0 chr2 65299408 . C . PASS END=65299428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,848:0,62,255:25,0 chr2 65299429 . C . PASS END=65299429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr2 65299430 . C . PASS END=65299430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 65299431 . C . PASS END=65299431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 65299432 . C . PASS END=65299432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 65299433 . C . PASS END=65299462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,909:0,65,255:26,0 chr2 65299463 . G . PASS END=65299463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr2 65299464 . G . PASS END=65299471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 65299472 . A . PASS END=65299472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:22,0 chr2 65299473 . G . PASS END=65299474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 65299475 . G . PASS END=65299476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 65299477 . C . PASS END=65299478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 65299479 . G . PASS END=65299483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 65299484 . G . PASS END=65299484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 65299485 . A . PASS END=65299486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 65299487 . G . PASS END=65299487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 65299488 . G . PASS END=65299489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 65299490 . T . PASS END=65299506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 65299507 . C . PASS END=65299512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 65299513 . G . PASS END=65299513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 65299514 . C . PASS END=65299539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1040:0,80,255:31,0 chr2 65299540 . A . PASS END=65299540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 65299541 . G . PASS END=65299542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 65299543 . T . PASS END=65299543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 65299544 . A . PASS END=65299568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1063:0,80,255:30,0 chr2 65299569 . T . PASS END=65299569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 65299570 . C . PASS END=65299578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 65299579 . C . PASS END=65299588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 65299589 . G . PASS END=65299593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 65299594 . G . PASS END=65299594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr2 65299595 . G . PASS END=65299612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1048:0,87,255:31,0 chr2 65299613 . G . PASS END=65299613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 65299614 . C . PASS END=65299614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 65299615 . G . PASS END=65299615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:28,0 chr2 65299616 . C . PASS END=65299634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1164:0,83,255:31,0 chr2 65299635 . A . PASS END=65299635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr2 65299636 . G . PASS END=65299641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 65299642 . A . PASS END=65299643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:27,0 chr2 65299644 . T . PASS END=65299644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 65299645 . C . PASS END=65299645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 65299646 . A . PASS END=65299647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:26,0 chr2 65299648 . A . PASS END=65299653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr2 65299654 . A . PASS END=65299656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:27,0 chr2 65299657 . T . PASS END=65299657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1049:0,62,255:27,0 chr2 65299658 . G . PASS END=65299661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 65299662 . A . PASS END=65299662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,962:0,35,255:26,0 chr2 65299663 . G . PASS END=65299663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 65299664 . T . PASS END=65299664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1035:0,62,255:27,0 chr2 65299665 . G . PASS END=65299675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1188:0,85,255:32,0 chr2 65299676 . T . PASS END=65299676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1082:0,68,255:31,0 chr2 65299677 . C . PASS END=65299698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1164:0,83,255:32,0 chr2 65299699 . C . PASS END=65299701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr2 65299702 . A . PASS END=65299702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:23,0 chr2 65299703 . G . PASS END=65299715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1008:0,77,255:26,0 chr2 65299716 . G . PASS END=65299722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,962:0,81,255:28,0 chr2 65299723 . A . PASS END=65299723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 65299724 . T . PASS END=65299726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 65299727 . A . PASS END=65299733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 65299734 . A . PASS END=65299734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr2 65299735 . T . PASS END=65299758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr2 65299759 . C . PASS END=65299759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 65299760 . T . PASS END=65299760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 65299761 . G . PASS END=65299765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 65299766 . T . PASS END=65299766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:18,0 chr2 65299767 . A . PASS END=65299772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 65299773 . G . PASS END=65299784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr2 65299785 . T . PASS END=65299785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 65299786 . T . PASS END=65299788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 65299789 . A . PASS END=65299790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 65299791 . G . PASS END=65299793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 65299794 . T . PASS END=65299800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr2 65299801 . G . PASS END=65299808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 65299809 . C . PASS END=65299812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 65299813 . C . PASS END=65299813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,677:0,27,255:17,0 chr2 65299814 . T . PASS END=65299823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,676:0,57,255:19,0 chr2 65299824 . T . PASS END=65299844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr2 65299845 . C . PASS END=65299846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 65299847 . T . PASS END=65299858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 65299859 . T . PASS END=65299864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 65299865 . C . PASS END=65299866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 65299867 . A . PASS END=65299869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,759:0,50,255:19,0 chr2 65299870 . G . PASS END=65299885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr2 65299886 . G . PASS END=65299892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 65299893 . A . PASS END=65299895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 65299896 . C . PASS END=65299896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 65299897 . C . PASS END=65299905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr2 65299906 . T . PASS END=65299906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 65299907 . G . PASS END=65299908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 65299909 . G . PASS END=65299909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr2 65299910 . C . PASS END=65299918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:20,0 chr2 65299919 . C . PASS END=65299920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 65299921 . G . PASS END=65299922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 65299923 . G . PASS END=65299938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 65299939 . G . PASS END=65299941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 65299942 . A . PASS END=65299945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 65299946 . C . PASS END=65299946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 65299947 . A . PASS END=65299977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr2 65299978 . C . PASS END=65300243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:32:0,84,1217:0,86,255:40,0 chr2 65300244 . T . PASS END=65300254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,87,255:26,0 chr2 65300255 . A . PASS END=65300255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,851:0,23,255:23,0 chr2 65300256 . G . PASS END=65300271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:26,0 chr2 65300272 . C . PASS END=65300277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:25:0,45,675:0,75,255:16,0 chr2 65300278 . A . PASS END=65300278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:39:25:0,39,585:0,75,255:13,0 chr2 65300279 . A . PASS END=65300279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:25:0,42,630:0,75,255:14,0 chr2 65301416 . A . PASS END=65301651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:35:0,81,1171:0,81,255:40,0 chr2 65301652 . T . PASS END=65301652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:28,0 chr2 65301653 . A . PASS END=65301653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 65301654 . T . PASS END=65301654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr2 65301655 . T . PASS END=65301657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1194:0,86,255:29,0 chr2 65301658 . A . PASS END=65301658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:28,0 chr2 65301659 . C . PASS END=65301663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:30,0 chr2 65301664 . A . PASS END=65301664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:28,0 chr2 65301665 . A . PASS END=65301670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 65305002 . C . PASS END=65305019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,872:0,62,255:26,0 chr2 65305020 . G . PASS END=65305025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1139:0,87,255:30,0 chr2 65305026 . C . PASS END=65305026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 65305027 . A . PASS END=65305064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:31:0,84,1127:0,84,255:40,0 chr2 65305065 . A . PASS END=65305065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1236:0,76,255:32,0 chr2 65305066 . T . PASS END=65305098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:33,0 chr2 65307410 . A . PASS END=65307416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,114,1411:0,114,255:40,0 chr2 65307417 . T . PASS END=65307471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,115,1497:0,115,255:40,0 chr2 65309670 . T . PASS END=65309671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 65309672 . T . PASS END=65309672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 65309673 . T . PASS END=65309693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,724:0,65,255:26,0 chr2 65309694 . T . PASS END=65309694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 65309695 . C . PASS END=65309698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 65309699 . A . PASS END=65309779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:29:0,81,1064:0,87,255:36,0 chr2 65309780 . A . PASS END=65309814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:26,0 chr2 65309815 . G . PASS END=65309830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:19,0 chr2 65309831 . G . PASS END=65309839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 65315627 . T . PASS END=65315630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,970:0,78,255:26,0 chr2 65315631 . C . PASS END=65315773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,935:0,81,255:40,0 chr2 65315774 . A . PASS END=65315774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr2 65315775 . T . PASS END=65315789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:33:0,95,1341:0,95,255:35,0 chr2 65315790 . T . PASS END=65315790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1105:0,68,255:31,0 chr2 65315791 . C . PASS END=65315796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 65315797 . A . PASS END=65315797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 65315798 . C . PASS END=65315806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 65315807 . A . PASS END=65315807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 65315808 . A . PASS END=65315815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 65315816 . A . PASS END=65315816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,976:0,57,255:27,0 chr2 65315817 . G . PASS END=65315818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 65315819 . A . PASS END=65315819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 65315820 . A . PASS END=65315820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 65315821 . A . PASS END=65315824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 65316073 . C . PASS END=65316204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:98:38:0,98,1356:0,98,255:40,0 chr2 65318117 . C . PASS END=65318212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,120,1800:0,138,255:40,0 chr2 65325105 . T . PASS END=65325200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:60:0,120,1800:0,135,255:40,0 chr2 65331868 . T . PASS END=65331940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:80:0,120,1800:0,224,255:40,0 chr2 65357027 . T . PASS END=65357030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr2 65357031 . C . PASS END=65357032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 65357033 . G . PASS END=65357036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 65357037 . T . PASS END=65357043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,74,255:23,0 chr2 65357044 . G . PASS END=65357049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:51:26:0,51,765:0,78,255:19,0 chr2 65455044 . A . PASS END=65455050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1266:0,105,255:35,0 chr2 65455051 . G . PASS END=65455051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr2 65455052 . C . PASS END=65455088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1213:0,91,255:37,0 chr2 65455089 . G . PASS END=65455091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1125:0,69,255:25,0 chr2 65466986 . T . PASS END=65466987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,93,255:31,0 chr2 65466988 . T . PASS END=65466988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 65466989 . G . PASS END=65467078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1172:0,93,255:40,0 chr2 65467079 . G . PASS END=65467083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:35:0,78,1170:0,105,255:26,0 chr2 65467084 . C . PASS END=65467085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr2 65467086 . T . PASS END=65467096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:28:0,72,1031:0,74,255:26,0 chr2 65469183 . A . PASS END=65469197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,189,255:40,0 chr2 65473319 . G . PASS END=65473357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,103,1640:0,103,255:40,0 chr2 65473658 . G . PASS END=65473658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 65473659 . A . PASS END=65473853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1058:0,87,255:40,0 chr2 65473854 . A . PASS END=65473854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:28,0 chr2 65473855 . C . PASS END=65473857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr2 65473858 . A . PASS END=65473873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:26:0,71,1031:0,71,255:28,0 chr2 65478161 . G . PASS END=65478229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1150:0,85,255:40,0 chr2 65478230 . C . PASS END=65478231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr2 65478232 . A . PASS END=65478233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr2 65480862 . G . PASS END=65480873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:23,0 chr2 65480874 . G . PASS END=65480970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:29:0,87,1124:0,87,255:40,0 chr2 65480971 . G . PASS END=65480991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1311:0,95,255:40,0 chr2 65480992 . T . PASS END=65480992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:33,0 chr2 65480993 . A . PASS END=65480998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:35,0 chr2 65482679 . C . PASS END=65482828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:44:0,120,1800:0,132,255:40,2 chr2 65488381 . C . PASS END=65488500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,145,255:40,0 chr2 65488501 . A . PASS END=65488526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,111,1665:0,111,255:40,0 chr2 65492177 . A . PASS END=65492177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,989:0,65,255:30,0 chr2 65492178 . T . PASS END=65492309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:33:0,89,1263:0,89,255:40,0 chr2 65495698 . A . PASS END=65495715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,709:0,66,255:26,0 chr2 65495716 . G . PASS END=65495717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 65495718 . A . PASS END=65495723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 65495724 . A . PASS END=65495821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:31:0,81,1133:0,82,255:40,0 chr2 65495822 . A . PASS END=65495822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1568:0,58,255:40,0 chr2 65495823 . A . PASS END=65495825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:86:47:0,86,1635:0,86,255:40,0 chr2 65495826 . G . PASS END=65495826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1689:0,75,255:38,0 chr2 65495827 . G . PASS END=65495837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:85:41:0,85,1458:0,85,255:40,0 chr2 65495838 . G . PASS END=65495838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:33,0 chr2 65495839 . C . PASS END=65495840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1395:0,82,255:31,0 chr2 65495841 . A . PASS END=65495843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1283:0,78,255:32,0 chr2 65495844 . G . PASS END=65495849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1172:0,85,255:32,0 chr2 65495850 . T . PASS END=65495858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr2 65495859 . T . PASS END=65495859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 65495860 . G . PASS END=65495866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 65495867 . A . PASS END=65495868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,956:0,70,255:26,0 chr2 65535453 . T . PASS END=65535456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr2 65535457 . C . PASS END=65535457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 65535458 . A . PASS END=65535533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1215:0,86,255:40,0 chr2 65535630 . A . PASS END=65535707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,213,255:40,0 chr2 65540635 . T . PASS END=65540646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:25,0 chr2 65540647 . T . PASS END=65540647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 65540648 . T . PASS END=65540654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,891:0,75,255:26,0 chr2 65540655 . T . PASS END=65540658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:29,0 chr2 65540659 . G . PASS END=65540659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 65540660 . C . PASS END=65540660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 65540661 . C . PASS END=65540661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 65540662 . A . PASS END=65540664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1147:0,90,255:31,0 chr2 65540665 . G . PASS END=65540665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 65540666 . C . PASS END=65540668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1210:0,96,255:32,0 chr2 65540669 . C . PASS END=65540669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:31,0 chr2 65540670 . T . PASS END=65540719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:33:0,81,1172:0,81,255:37,0 chr2 65540720 . A . PASS END=65540720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1197:0,77,255:31,0 chr2 65540721 . T . PASS END=65540742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1304:0,95,255:35,0 chr2 65540743 . G . PASS END=65540743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:28,0 chr2 65540744 . G . PASS END=65540759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1166:0,83,255:31,0 chr2 65540760 . A . PASS END=65540760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:29,0 chr2 65540761 . C . PASS END=65540763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 65540764 . G . PASS END=65540764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 65540765 . A . PASS END=65540784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr2 65540785 . A . PASS END=65540785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:28,0 chr2 65540786 . G . PASS END=65540799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1260:0,85,255:32,0 chr2 65540800 . A . PASS END=65540806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:35:0,72,1080:0,95,255:25,0 chr2 65540807 . G . PASS END=65540833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1178:0,93,255:32,0 chr2 65540834 . C . PASS END=65540842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:26,0 chr2 65540843 . A . PASS END=65540843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1040:0,54,255:25,0 chr2 65540844 . G . PASS END=65540850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,917:0,78,255:26,0 chr2 65540851 . G . PASS END=65540851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 65540852 . T . PASS END=65540854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 65540855 . G . PASS END=65540867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 65540868 . A . PASS END=65540873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 65540874 . C . PASS END=65540874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 65540875 . C . PASS END=65540904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr2 65540905 . C G, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=2.946;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,15,0:0.517,0.000:29:4,9,0:10,6,0:48:85,0,50,529,494,1023:255,0,255:14,0:5.0000e+01,6.5492e-05,5.2928e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,8,7:5,9,6,9 chr2 65540906 . G . PASS END=65540917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1078:0,87,255:30,0 chr2 65540918 . T . PASS END=65540918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 65540919 . G . PASS END=65540942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr2 65540943 . T . PASS END=65540945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 65540946 . A . PASS END=65540966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,67,255:24,0 chr2 65540967 . A . PASS END=65540967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 65540968 . C . PASS END=65540989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr2 65540990 . T . PASS END=65540990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 65540991 . T . PASS END=65541041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr2 65541042 . C . PASS END=65541058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr2 65541059 . T . PASS END=65541059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 65541060 . C . PASS END=65541070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 65541071 . A . PASS END=65541077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 65541078 . A . PASS END=65541085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,676:0,46,255:19,0 chr2 65541086 . A . PASS END=65541086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 65541087 . C . PASS END=65541087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 65541088 . G . PASS END=65541088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 65541089 . T . PASS END=65541101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,676:0,46,255:19,0 chr2 65541102 . A . PASS END=65541106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:20,0 chr2 65541107 . T . PASS END=65541109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,59,255:22,0 chr2 65541110 . T . PASS END=65541165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,831:0,62,255:26,0 chr2 65541166 . G . PASS END=65541303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:29:0,83,1180:0,83,255:40,0 chr2 65543868 . C . PASS END=65544002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:38:0,98,1388:0,98,255:40,0 chr2 65544003 . A . PASS END=65544017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:63:28:0,63,945:0,67,255:25,0 chr2 65559121 . T . PASS END=65559185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,113,1499:0,113,255:40,0 chr2 65561249 . C . PASS END=65561252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,205,255:40,0 chr2 65561338 . T . PASS END=65561399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:38:0,93,1475:0,93,255:40,0 chr2 65561739 . C . PASS END=65561907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:30:0,84,1260:0,84,255:40,0 chr2 65571654 . T . PASS END=65571660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1166:0,99,255:33,0 chr2 65571661 . A . PASS END=65571661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1050:0,49,255:27,0 chr2 65571662 . G . PASS END=65571662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 65571663 . A . PASS END=65571663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:27,0 chr2 65571664 . C . PASS END=65571728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,84,255:38,0 chr2 65571853 . C . PASS END=65571855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1382:0,81,255:39,0 chr2 65571856 . T . PASS END=65571856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1039:0,66,255:36,0 chr2 65571857 . T . PASS END=65572011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1260:0,93,255:40,0 chr2 65572012 . A . PASS END=65572012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 65572013 . C . PASS END=65572030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:18:0,48,644:0,54,255:19,0 chr2 65593724 . C . PASS END=65593740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,168,255:40,0 chr2 65604747 . C . PASS END=65604793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1164:0,86,255:34,0 chr2 65604794 . G . PASS END=65604794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr2 65604795 . G . PASS END=65604808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1188:0,85,255:29,0 chr2 65604809 . T . PASS END=65604817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:28:0,69,1035:0,74,255:26,0 chr2 65659096 . T . PASS END=65659106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr2 65659107 . T . PASS END=65659107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 65659108 . G . PASS END=65659114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 65659115 . C . PASS END=65659115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 65659116 . G . PASS END=65659121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr2 66662989 . A . PASS END=66663000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,138,255:40,0 chr2 66664028 . A . PASS END=66664055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,2:96:99:86:0,120,1800:0,124,255:40,0 chr2 66664056 . T . PASS END=66664075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,3:97:99:92:0,120,1800:0,217,255:40,0 chr2 66664863 . A . PASS END=66665041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1141:0,80,255:40,0 chr2 66665042 . C . PASS END=66665062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 66665063 . C . PASS END=66665074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 66665075 . A . PASS END=66665075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:19,0 chr2 66665076 . G . PASS END=66665095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,684:0,44,255:19,0 chr2 66666760 . A . PASS END=66666761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,637:0,54,255:18,0 chr2 66666762 . G . PASS END=66666762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 66666763 . G . PASS END=66666777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr2 66666778 . C . PASS END=66666778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 66666779 . T . PASS END=66666796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,706:0,54,255:19,0 chr2 66666797 . A . PASS END=66666797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:17,0 chr2 66666798 . G . PASS END=66666802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 66666803 . G . PASS END=66666803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:19,0 chr2 66666975 . A . PASS END=66667089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:34:0,85,1113:0,85,255:40,1 chr2 66667090 . G . PASS END=66667102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:61:27:0,61,945:0,61,255:25,0 chr2 66667103 . T . PASS END=66667104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr2 66667105 . T . PASS END=66667108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 66667109 . C . PASS END=66667109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,731:0,30,255:20,0 chr2 66667110 . C . PASS END=66667110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 66667111 . A . PASS END=66667112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 66667113 . A . PASS END=66667113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,640:0,49,255:20,0 chr2 66667114 . C . PASS END=66667115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 66667116 . G . PASS END=66667116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 66667694 . A . PASS END=66667710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:88:46:0,88,1379:0,88,255:40,0 chr2 66667711 . T . PASS END=66667711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1452:0,77,255:40,0 chr2 66667712 . C . PASS END=66667729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:48:0,100,1690:0,100,255:40,0 chr2 66667730 . G . PASS END=66667730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:70:53:0,70,1660:0,70,255:40,0 chr2 66667731 . A . PASS END=66667736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,114,1710:0,117,255:40,0 chr2 66667737 . A . PASS END=66667737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:76:52:0,76,1688:0,76,255:39,0 chr2 66667738 . T . PASS END=66667744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,111,1665:0,130,255:40,0 chr2 66667810 . A . PASS END=66667810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,698:0,11,255:18,0 chr2 66667811 . G . PASS END=66667811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:18,0 chr2 66667812 . C . PASS END=66667812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:19,0 chr2 66667813 . T . PASS END=66667813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:7:21:0,7,584:0,7,255:18,0 chr2 66667814 . T . PASS END=66667814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,645:0,16,255:18,0 chr2 66667815 . T . PASS END=66667815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:20,0 chr2 66667816 . G . PASS END=66667816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:19,0 chr2 66667817 . C . PASS END=66667817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 66667818 . T . PASS END=66667819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,618:0,49,255:20,0 chr2 66667820 . T . PASS END=66667820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:19,0 chr2 66667821 . G . PASS END=66667821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 66667822 . A . PASS END=66667822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr2 66667823 . G . PASS END=66667823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 66667824 . A . PASS END=66667824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 66667825 . G . PASS END=66667826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 66667827 . C . PASS END=66667828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 66667829 . T . PASS END=66667829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 66667830 . G . PASS END=66667831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,684:0,30,255:19,0 chr2 66667832 . G . PASS END=66667834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:17,0 chr2 66667835 . T . PASS END=66667836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,629:0,30,255:16,0 chr2 66667837 . C . PASS END=66667837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 66667838 . T . PASS END=66667838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:15,0 chr2 66667839 . A . PASS END=66667840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:16,0 chr2 66667841 . A . PASS END=66667841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,596:0,5,255:15,0 chr2 66667842 . C . PASS END=66667842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 66667843 . C . PASS END=66667843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 66667844 . G . PASS END=66667844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr2 66667845 . G . PASS END=66667846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,475:0,34,255:16,0 chr2 66667847 . C . PASS END=66667847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 66667848 . T . PASS END=66667848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,512:0,4,255:13,0 chr2 66667849 . T . PASS END=66667849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr2 66667850 . C . PASS END=66667851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 66667852 . C . PASS END=66667853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,540:0,34,255:12,0 chr2 66667854 . T . PASS END=66667854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,527:0,12,255:12,0 chr2 66667855 . G . PASS END=66667855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,534:0,4,255:12,0 chr2 66667856 . C . PASS END=66667857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,35,255:11,0 chr2 66667858 . T . LowGQ END=66667859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:16:0,0,451:0,0,255:11,0 chr2 66667860 . C . PASS END=66667861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:13,0 chr2 66667862 . G . PASS END=66667862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:13,0 chr2 66668546 . A . PASS END=66668596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,161,255:40,0 chr2 66670034 . G . PASS END=66670173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:39:0,87,1305:0,101,255:40,0 chr2 66670174 . T . PASS END=66670176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:38:0,90,1350:0,98,255:30,0 chr2 66670177 . C . PASS END=66670180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:38:0,69,1035:0,114,255:23,0 chr2 66691241 . C . PASS END=66691324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,88,255:40,0 chr2 66691325 . C . PASS END=66691352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr2 66739281 . G . PASS END=66739288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:26,0 chr2 66739289 . T . PASS END=66739399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,972:0,81,255:40,0 chr2 66739400 . A . PASS END=66739413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:25:0,63,945:0,75,255:25,0 chr2 66739414 . C . PASS END=66739426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr2 66775075 . C . PASS END=66775151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,139,255:40,0 chr2 66794585 . G . PASS END=66794732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,120,1800:0,143,255:40,0 chr2 66795797 . A . PASS END=66795797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 66795799 . T . PASS END=66795911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:51:0,120,1800:0,152,255:40,0 chr2 66796182 . G . PASS END=66796240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:48:0,107,1800:0,107,255:40,0 chr2 66798378 . G . PASS END=66798388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,451:0,36,255:13,0 chr2 66798389 . A . PASS END=66798401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 66798402 . A . PASS END=66798402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 66798403 . T . PASS END=66798403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 66798404 . G . PASS END=66798417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 66798418 . T . PASS END=66798418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 66798419 . C . PASS END=66798421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 66798422 . A . PASS END=66798422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 66798423 . T . PASS END=66798428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,808:0,63,255:22,0 chr2 66798429 . T . PASS END=66798430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 66798431 . A . PASS END=66798434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 66798435 . T . PASS END=66798435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 66798436 . G . PASS END=66798436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 66798437 . G . PASS END=66798437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 66798438 . G . PASS END=66798445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 66798446 . A . PASS END=66798446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr2 66798447 . G . PASS END=66798466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,878:0,64,255:26,0 chr2 66798467 . C . PASS END=66798467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,739:0,42,255:20,0 chr2 66798468 . C . PASS END=66798484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,717:0,63,255:23,0 chr2 66798485 . C . PASS END=66798485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr2 66798486 . T . PASS END=66798506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 66798507 . A . PASS END=66798508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 66798509 . A . PASS END=66798510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:26,0 chr2 66798511 . G . PASS END=66798513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 66798514 . C . PASS END=66798514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 66798515 . A . PASS END=66798515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,947:0,35,255:27,0 chr2 66798516 . T . PASS END=66798516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 66798517 . T . PASS END=66798517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr2 66798518 . C . PASS END=66798555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1151:0,85,255:38,0 chr2 66798556 . A . PASS END=66798556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1275:0,75,255:37,0 chr2 66798557 . G . PASS END=66798615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1377:0,84,255:40,0 chr2 66798616 . A . PASS END=66798616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:33,0 chr2 66798617 . G . PASS END=66798643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1250:0,81,255:34,0 chr2 66798644 . G . PASS END=66798653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:25,0 chr2 66798654 . C . PASS END=66798656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,821:0,56,255:22,0 chr2 66798657 . A . PASS END=66798661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 67624581 . A . PASS END=67624583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 67624584 . A . PASS END=67624584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,601:0,32,255:20,0 chr2 67624585 . G . PASS END=67624598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr2 67624599 . C . PASS END=67624599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:20,0 chr2 67624600 . A . PASS END=67624617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr2 67624618 . C . PASS END=67624618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 67624619 . G . PASS END=67624619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 67624620 . A . PASS END=67624620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 67624621 . A . PASS END=67624625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,791:0,66,255:22,0 chr2 67624626 . A . PASS END=67624626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:20,0 chr2 67624627 . C . PASS END=67624630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,821:0,66,255:22,0 chr2 67624631 . G . PASS END=67624632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 67624633 . A . PASS END=67624635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 67624636 . A . PASS END=67624636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 67624637 . A . PASS END=67624637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,689:0,39,255:20,0 chr2 67624638 . A . PASS END=67624641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 67624642 . T . PASS END=67624642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:19,0 chr2 67624643 . G . PASS END=67624643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 67624644 . G . PASS END=67624644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr2 67624645 . C . PASS END=67624645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 67624646 . G . PASS END=67624650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 67624651 . A . PASS END=67624655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 67624656 . T . PASS END=67624656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:18,0 chr2 67624657 . G . PASS END=67624662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 67624663 . C . PASS END=67624714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,582:0,48,255:19,0 chr2 67624715 . C . PASS END=67624721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:14,0 chr2 67624722 . G . PASS END=67624722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 67624723 . C . PASS END=67624726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr2 67624727 . A . PASS END=67624727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:11,0 chr2 67624728 . G . PASS END=67624768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,366:0,33,255:11,0 chr2 67624769 . G . PASS END=67624778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 67624779 . C . PASS END=67624779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:6,0 chr2 67624780 . T . PASS END=67624781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 67624782 . T . PASS END=67624803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr2 67626301 . A . PASS END=67626429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,148,255:40,0 chr2 67626682 . G . PASS END=67626758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:80:0,120,1800:0,192,255:40,0 chr2 67629994 . G . PASS END=67630106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,141,255:40,0 chr2 67630357 . G . PASS END=67630942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:98:43:0,98,1544:0,98,255:40,0 chr2 67630943 . A . PASS END=67630979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,161,255:40,0 chr2 67630980 . G A, 236.15 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,33,0:0,30,0:186:274,189,0,2405,189,2405:255,190,0:0,0:2.3615e+02,1.8615e+02,0.0000e+00,4.5000e+02,2.2092e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,29:0,0,26,37 chr2 67630981 . T . PASS END=67631017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,157,255:40,0 chr2 67631018 . C . PASS END=67631793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:56:0,120,1800:0,147,255:40,0 chr2 67631794 . G . PASS END=67631830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:79:0,120,1800:0,207,255:40,0 chr2 67631831 . G A, 48.68 PASS DP=85;MQ=219.24;MQRankSum=2.983;ReadPosRankSum=4.924;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,37,0:0.435,0.000:85:26,20,0:22,17,0:47:83,0,50,1299,1643,2942:255,0,255:40,0:4.8680e+01,8.0506e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,22,21,16:30,18,20,17 chr2 67631832 . A . PASS END=67631868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:80:0,120,1800:0,192,255:40,0 chr2 67631869 . A . PASS END=67632087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,175,255:40,0 chr2 67632088 . T . PASS END=67632124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:64:0,120,1800:0,165,255:40,0 chr2 67632125 . C T, 239.16 PASS DP=64;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,36,0:0,28,0:189:277,192,0,2444,192,2444:255,193,0:0,0:2.3916e+02,1.8916e+02,0.0000e+00,4.5000e+02,2.2393e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,37:0,0,31,33 chr2 67632126 . C . PASS END=67632162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:61:0,120,1800:0,162,255:40,0 chr2 67632163 . G . PASS END=67632467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:39:0,87,1398:0,87,255:40,0 chr2 67637043 . A . PASS END=67637158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:51:0,120,1800:0,127,255:40,1 chr2 67637159 . T . PASS END=67637170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,107,1458:0,107,255:40,0 chr2 68270021 . T . LowGQ END=68270022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,374:43,0,255:13,0 chr2 68270023 . A . PASS END=68270024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 68270025 . C . PASS END=68270027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:2:19:0,2,549:0,2,255:15,0 chr2 68270028 . T . PASS END=68270028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,529:0,24,255:13,0 chr2 68270029 . T . PASS END=68270029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 68270030 . A . PASS END=68270030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:15,0 chr2 68270031 . C . LowGQ END=68270033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,398:18,0,255:15,0 chr2 68270034 . T . PASS END=68270036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 68270037 . C . LowGQ END=68270038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,410:18,0,255:15,0 chr2 68270039 . T . PASS END=68270039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 68270040 . T . PASS END=68270040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,531:0,23,255:15,0 chr2 68270041 . T . PASS END=68270041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,476:0,34,255:14,0 chr2 68270042 . A . LowGQ END=68270042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,459:19,0,255:15,0 chr2 68270043 . T . PASS END=68270043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 68270044 . T . PASS END=68270044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 68270045 . G . PASS END=68270045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:16,0 chr2 68270046 . G . PASS END=68270046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 68270047 . C . LowGQ END=68270047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,496:23,0,255:16,0 chr2 68270048 . A . PASS END=68270049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,574:0,15,255:16,0 chr2 68270050 . C . PASS END=68270050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:17,0 chr2 68270051 . T . PASS END=68270051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,621:0,26,255:17,0 chr2 68270052 . T . PASS END=68270052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:17,0 chr2 68270053 . T . PASS END=68270053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,533:0,26,255:17,0 chr2 68270054 . T . PASS END=68270054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:17,0 chr2 68270055 . G . PASS END=68270055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,549:0,7,255:16,0 chr2 68270056 . A . PASS END=68270056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:17,0 chr2 68270057 . T . PASS END=68270058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,559:0,10,255:17,0 chr2 68270059 . C . PASS END=68270060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,492:0,2,255:17,0 chr2 68270061 . T . PASS END=68270062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:17,0 chr2 68270063 . T . LowGQ END=68270063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,549:15,0,255:16,0 chr2 68270064 . T . PASS END=68270064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,546:0,18,255:17,0 chr2 68270065 . T . PASS END=68270067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr2 68270068 . A G, 41.75 PASS DP=17;MQ=73.86;MQRankSum=-2.358;ReadPosRankSum=2.550;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:6,4,0:3,4,0:41:77,0,47,286,322,608:255,0,255:9,0:4.1750e+01,3.3679e-04,4.9700e+01,2.8611e+02,3.5653e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,1,3,5:5,4,3,5 chr2 68270069 . T . PASS END=68270072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:17,0 chr2 68270073 . G . PASS END=68270073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:17,0 chr2 68270074 . G . PASS END=68270074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:17,0 chr2 68270075 . T . PASS END=68270076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,562:0,40,255:17,0 chr2 68270077 . C . PASS END=68270077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 68270078 . C . PASS END=68270078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr2 68270079 . C . PASS END=68270080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 68270081 . G . PASS END=68270082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,566:0,15,255:17,0 chr2 68270083 . G . PASS END=68270084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:18,0 chr2 68270085 . G . PASS END=68270085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr2 68270086 . C . PASS END=68270089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:18,0 chr2 68270090 . T . PASS END=68270090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 68270091 . T . PASS END=68270097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:18,0 chr2 68270098 . A . PASS END=68270098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,584:0,26,255:17,0 chr2 68270099 . T . PASS END=68270099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,531:0,12,255:17,0 chr2 68270100 . C . PASS END=68270105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr2 68270106 . G . PASS END=68270109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr2 68270110 . C . PASS END=68270110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 68270111 . A . PASS END=68270111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 68270112 . C . PASS END=68270112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 68270113 . C . PASS END=68270121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 68270122 . G . PASS END=68270122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 68270123 . C . PASS END=68270137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 68270138 . C . PASS END=68270139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 68270140 . T . PASS END=68270157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:20,0 chr2 68270158 . C . PASS END=68270175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 68270176 . T . PASS END=68270176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,500:0,20,255:16,0 chr2 68270177 . G . PASS END=68270177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 68270178 . A . PASS END=68270180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 68270181 . C . PASS END=68270181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr2 68270182 . T . PASS END=68270185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr2 68273120 . C . PASS END=68273175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,162,255:40,0 chr2 68273476 . C . PASS END=68273542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,189,255:40,0 chr2 68274305 . C . PASS END=68274451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:29:0,81,1172:0,83,255:40,0 chr2 68280193 . C . PASS END=68280193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 68280194 . C . PASS END=68280194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 68280195 . A . PASS END=68280195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 68280196 . G . PASS END=68280200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 68280201 . G . PASS END=68280201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 68280202 . C . PASS END=68280216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:31,0 chr2 68280217 . C . PASS END=68280217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 68280218 . G . PASS END=68280300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:32:0,86,1134:0,86,255:40,0 chr2 68358370 . T . PASS END=68358378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,929:0,62,255:25,0 chr2 68358379 . A . PASS END=68358385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr2 68358386 . T . PASS END=68358386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr2 68358387 . T . PASS END=68358389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1008:0,78,255:26,0 chr2 68358390 . T . PASS END=68358390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:24,0 chr2 68358391 . A . PASS END=68358393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 68358394 . G . PASS END=68358545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:28:0,81,1215:0,84,255:40,0 chr2 68358546 . A . PASS END=68358552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr2 68358553 . C . PASS END=68358553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:48:50:0,48,1636:0,48,255:40,0 chr2 68358554 . T . PASS END=68358577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1215:0,94,255:40,0 chr2 68359137 . C . PASS END=68359137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 68361833 . C . PASS END=68361874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1243:0,99,255:34,0 chr2 68361875 . A . PASS END=68361875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:30,0 chr2 68361876 . A . PASS END=68361886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,86,255:31,0 chr2 68361887 . G . PASS END=68361887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:26,0 chr2 68361888 . T . PASS END=68361889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1215:0,83,255:27,0 chr2 68361890 . C . PASS END=68361904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 68361905 . G . PASS END=68361905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 68361906 . A . PASS END=68361914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,892:0,72,255:24,0 chr2 68361915 . A . PASS END=68361931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:42:19:0,42,630:0,43,255:19,0 chr2 68364431 . C . PASS END=68364565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1202:0,86,255:40,0 chr2 68365874 . C . PASS END=68365989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:70:0,120,1800:0,151,255:40,0 chr2 68368826 . C . PASS END=68368927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:41:0,90,1590:0,90,255:40,0 chr2 68371717 . C . PASS END=68371847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,106,1565:0,106,255:40,0 chr2 68374599 . C . PASS END=68374699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:75:0,120,1800:0,186,255:40,0 chr2 68384393 . C . PASS END=68384393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 68384394 . T . PASS END=68384398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 68384399 . A . PASS END=68384399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 68384400 . A . PASS END=68384436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,582:0,48,255:19,0 chr2 68384437 . G . PASS END=68384441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 68384442 . A . PASS END=68384444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 68384445 . C . PASS END=68384445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:19,0 chr2 68384446 . C . PASS END=68384455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 68384456 . T . PASS END=68384456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:21,0 chr2 68384457 . G . PASS END=68384464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 68384465 . G . PASS END=68384465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr2 68384466 . C . PASS END=68384480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,732:0,60,255:22,0 chr2 68384481 . T . PASS END=68384481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr2 68384482 . T . PASS END=68384494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 68384495 . C . PASS END=68384495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 68384496 . A . PASS END=68384497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 68384498 . C . PASS END=68384506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 68384507 . G . PASS END=68384522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr2 68384523 . T . PASS END=68384523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 68384524 . T . PASS END=68384548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,878:0,72,255:26,0 chr2 68384549 . G . PASS END=68384575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1180:0,90,255:31,0 chr2 68384593 . C . PASS END=68384605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr2 68384606 . C . PASS END=68384606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:26,0 chr2 68384607 . A . PASS END=68384814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1058:0,80,255:40,0 chr2 68384815 . C . PASS END=68384822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:21,0 chr2 68384823 . C . PASS END=68384826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:28:0,57,855:0,67,255:19,0 chr2 68384928 . C . PASS END=68384929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 68384930 . G . PASS END=68384936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr2 68384937 . A . PASS END=68384937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 68384938 . T . PASS END=68384959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:18,0 chr2 68384960 . A . PASS END=68384960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr2 68384961 . C . PASS END=68384981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,637:0,41,255:19,0 chr2 68384982 . C . PASS END=68384984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 68384985 . C . PASS END=68384985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr2 68384986 . A . PASS END=68384993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 68384994 . T . PASS END=68385017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,682:0,54,255:19,0 chr2 68385018 . G . PASS END=68385048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,884:0,72,255:24,0 chr2 68385049 . G . PASS END=68385049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 68385050 . C . PASS END=68385053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 68385054 . A . PASS END=68385054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 68385055 . A . PASS END=68385059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 68385060 . T . PASS END=68385067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 68385068 . T . PASS END=68385068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 68385069 . G . PASS END=68385069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 68385070 . G . PASS END=68385070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 68385071 . A . PASS END=68385075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 68385076 . G . PASS END=68385076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:22,0 chr2 68385077 . A . PASS END=68385079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 68385080 . T . PASS END=68385080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 68385081 . G . PASS END=68385091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr2 68385092 . G . PASS END=68385092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 68385093 . C . PASS END=68385094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 68385095 . C . PASS END=68385096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 68385097 . A G, 119.22 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,12,0:0,12,0:69:157,72,0,907,72,907:255,72,0:0,0:1.1922e+02,6.9224e+01,5.1772e-07,4.5000e+02,1.0399e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,14:0,0,14,10 chr2 68385098 . G . PASS END=68385123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:23,0 chr2 68385124 . A . PASS END=68385134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 68385135 . T . PASS END=68385154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,698:0,57,255:19,0 chr2 68385155 . G . PASS END=68385157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 68385158 . A . PASS END=68385180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr2 68385181 . G . PASS END=68385205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 68385206 . T . PASS END=68385240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr2 68385241 . G . PASS END=68385241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 68385242 . T . PASS END=68385261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,47,255:19,0 chr2 68385262 . G . PASS END=68385273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 68385512 . A . PASS END=68385661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:52:0,120,1800:0,121,255:40,0 chr2 68388347 . T . PASS END=68388400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:37:0,96,1440:0,107,255:40,0 chr2 68388815 . A . PASS END=68388822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,120,1800:0,129,255:40,0 chr2 68388823 . A G, 49.97 PASS DP=50;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=2.410;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,24,0:0.490,0.000:49:7,16,0:18,8,0:48:85,0,50,802,829,1630:255,0,255:24,0:4.9974e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,12,12:10,15,12,12 chr2 68388824 . G . PASS END=68388860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,147,255:40,0 chr2 68388861 . A . PASS END=68388898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:91:58:0,91,1800:0,91,255:40,0 chr2 68389397 . G . PASS END=68389435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,152,255:40,0 chr2 68389436 . G . PASS END=68389457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,152,255:40,0 chr2 68389678 . T . PASS END=68389778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1288:0,92,255:40,0 chr2 68389779 . A . PASS END=68389779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:28,0 chr2 68389780 . T . PASS END=68389789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,88,255:30,0 chr2 68389790 . T . PASS END=68389795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:26,0 chr2 68392070 . G . PASS END=68392091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1607:0,119,255:40,0 chr2 68400479 . G . PASS END=68400549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:37:0,108,1620:0,111,255:40,0 chr2 68401867 . G . PASS END=68401934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,140,255:40,0 chr2 68408095 . T . PASS END=68408142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,156,255:40,0 chr2 68413600 . A . PASS END=68413782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:84:36:0,84,1260:0,87,255:40,0 chr2 68413783 . A . PASS END=68413783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:30,0 chr2 68413784 . A . PASS END=68413784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 68414387 . A . PASS END=68414446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,181,255:40,0 chr2 68415646 . C . PASS END=68415648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 68415649 . T . PASS END=68415649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 68415650 . A . PASS END=68415729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:31:0,83,1182:0,83,255:40,0 chr2 68415730 . G . PASS END=68415766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,120,1800:0,160,255:40,0 chr2 68415767 . G A, 206.05 PASS DP=53;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,26,0:0,27,0:156:244,159,0,2017,159,2017:255,159,0:0,0:2.0605e+02,1.5605e+02,0.0000e+00,4.5000e+02,1.9082e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,24:0,0,28,25 chr2 68415768 . T . PASS END=68415804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:97:40:0,97,1575:0,97,255:40,0 chr2 68415805 . T . PASS END=68415818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1305:0,92,255:33,0 chr2 68415819 . T . PASS END=68415822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr2 68444224 . A . PASS END=68444263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:84:0,120,1800:0,236,255:40,0 chr2 68479257 . C . PASS END=68479258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:17,0 chr2 68479259 . T . PASS END=68479259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:16,0 chr2 68483188 . C . PASS END=68483247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,137,255:40,0 chr2 68511560 . T . PASS END=68511583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,181,255:40,0 chr2 68511584 . A G,T, 44.95 PASS DP=75;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:47,28,0,0:0.373,0.000,0.000:75:25,15,0,0:22,13,0,0:44:80,0,50,973,1434,1023,973,1447,2406,2420:255,0,255:40,0:4.4951e+01,1.6075e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:18,29,17,11:22,25,18,10 chr2 68511585 . G . PASS END=68511616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:67:0,120,1800:0,191,255:40,0 chr2 68520994 . T . PASS END=68521145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:34:0,95,1305:0,95,255:40,0 chr2 68521146 . C . PASS END=68521146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:32,0 chr2 68521147 . A . PASS END=68521150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,97,255:33,0 chr2 68521151 . T . PASS END=68521152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 68521153 . T . PASS END=68521158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 68544205 . T . PASS END=68544387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1215:0,93,255:40,0 chr2 68544388 . C . PASS END=68544388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 68544389 . T . PASS END=68544393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 68544394 . A . PASS END=68544394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 68544395 . G . PASS END=68544396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 68544397 . C . PASS END=68544423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 68544424 . A . PASS END=68544424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 68544425 . C . PASS END=68544428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 68544429 . T . PASS END=68544436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,721:0,49,255:19,0 chr2 68544437 . T . PASS END=68544437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 68544438 . T . PASS END=68544439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr2 68546354 . T . PASS END=68546365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr2 68546366 . G . PASS END=68546370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 68546371 . G . PASS END=68546371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 68546372 . G . PASS END=68546373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 68546374 . T C, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,8,0:0,13,0:60:148,63,0,806,63,806:255,66,0:0,0:1.1020e+02,6.0201e+01,4.1418e-06,4.5000e+02,9.4971e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,10:0,0,10,11 chr2 68546375 . T . PASS END=68546377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 68546378 . A . PASS END=68546379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,775:0,50,255:22,0 chr2 68546380 . C . PASS END=68546382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 68546383 . C . PASS END=68546383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 68546384 . A . PASS END=68546386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 68546387 . T . PASS END=68546387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 68546388 . C . PASS END=68546389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 68546390 . A . PASS END=68546390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 68546391 . C . PASS END=68546392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 68546393 . T . PASS END=68546394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,648:0,33,255:20,0 chr2 68546395 . G . PASS END=68546396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 68546397 . A . PASS END=68546397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 68546398 . G . PASS END=68546400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 68546401 . G . PASS END=68546401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:19,0 chr2 68546402 . G . PASS END=68546407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 68546408 . G . PASS END=68546410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 68546411 . A . PASS END=68546411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:18,0 chr2 68546412 . G . PASS END=68546448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr2 68546449 . G A, 95.16 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:133,48,0,620,48,620:255,48,0:0,0:9.5156e+01,4.5156e+01,1.3254e-04,4.5000e+02,7.9926e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,11:0,0,9,7 chr2 68546450 . T . PASS END=68546455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr2 68546456 . T . PASS END=68546465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:13,0 chr2 68546466 . C . PASS END=68546470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 68546471 . C . PASS END=68546486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:9:0,21,315:0,25,255:9,0 chr2 68546487 . T . PASS END=68546490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr2 68546491 . C . PASS END=68546506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 68546507 . C . PASS END=68546522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr2 68546523 . G . PASS END=68546532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,219:5,0 chr2 68592484 . A . PASS END=68592525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,103,1783:0,103,255:40,0 chr2 68607460 . G . PASS END=68607606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,994:0,81,255:40,0 chr2 68607607 . A . PASS END=68607615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1055:0,74,255:26,0 chr2 68607855 . T . PASS END=68607881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:21:0,62,672:0,62,255:26,0 chr2 68607882 . C . PASS END=68607886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 68607887 . G . PASS END=68607888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:70:29:0,70,994:0,70,255:30,0 chr2 68607889 . A . PASS END=68607970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:30:0,82,1134:0,82,255:38,0 chr2 68607971 . A . PASS END=68607971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr2 68607972 . G . PASS END=68607972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:32,0 chr2 68607973 . G . PASS END=68607973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1142:0,75,255:31,0 chr2 68607974 . C . PASS END=68607980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1186:0,86,255:35,0 chr2 68607981 . T . PASS END=68607981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1103:0,50,255:32,0 chr2 68607982 . T . PASS END=68608002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1310:0,92,255:36,0 chr2 68608003 . G . PASS END=68608003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1114:0,77,255:31,0 chr2 68608004 . G . PASS END=68608012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1280:0,94,255:33,0 chr2 68608013 . A . PASS END=68608013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:30,0 chr2 68608014 . C . PASS END=68608026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1180:0,85,255:33,0 chr2 68608027 . T . PASS END=68608036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:62:31:0,62,1035:0,62,255:25,0 chr2 68609674 . T . PASS END=68609765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:76:0,120,1800:0,198,255:40,0 chr2 68613634 . G . PASS END=68613640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1235:0,102,255:34,0 chr2 68613641 . C . PASS END=68613641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:33,0 chr2 68613642 . G . PASS END=68613672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:37:0,95,1319:0,95,255:40,0 chr2 68613673 . T . PASS END=68613709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,128,255:40,0 chr2 68613710 . G A, 206.05 PASS DP=53;MQ=249.43;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,25,0:0,28,0:156:244,159,0,2009,159,2009:255,159,0:0,0:2.0605e+02,1.5605e+02,0.0000e+00,4.5000e+02,1.9082e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,24:0,0,25,28 chr2 68613711 . C . PASS END=68613747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,128,255:40,0 chr2 68613748 . T . PASS END=68613793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:38:0,96,1433:0,101,255:40,0 chr2 68613794 . C . PASS END=68613804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:33:0,63,945:0,92,255:26,0 chr2 68613805 . C . PASS END=68613811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,68,255:19,0 chr2 68613812 . C . PASS END=68613818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:20,0 chr2 68615519 . C . PASS END=68615616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,147,255:40,0 chr2 68615617 . G . PASS END=68615623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,140,255:40,0 chr2 68620294 . G . PASS END=68620372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,114,1710:0,138,255:40,0 chr2 68620373 . C . PASS END=68620377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:44:0,96,1440:0,132,255:35,0 chr2 68621239 . G . PASS END=68621300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,153,255:40,0 chr2 68621301 . C . PASS END=68621308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,125,255:40,2 chr2 68622812 . G . PASS END=68622835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,99,1436:0,99,255:40,2 chr2 68622836 . T . PASS END=68622836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:64:50:0,64,1615:0,64,255:40,2 chr2 68622837 . T . PASS END=68622876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:86:49:0,86,1427:0,86,255:40,0 chr2 68622877 . C . PASS END=68622913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,85,255:40,0 chr2 68622914 . G A, 145.40 PASS DP=34;MQ=250.00;FractionInformativeReads=0.971 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,19,0:0,14,0:95:183,98,0,1205,98,1205:255,102,0:0,0:1.4540e+02,9.5397e+01,0.0000e+00,4.5000e+02,1.3017e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,20:0,0,17,16 chr2 68622915 . A . PASS END=68622918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1180:0,85,255:28,0 chr2 68622919 . A . PASS END=68622948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 68691341 . T . PASS END=68691502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:40:0,84,1260:0,113,255:40,0 chr2 68691972 . C . PASS END=68691977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 68691978 . G . PASS END=68691978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 68691979 . G . PASS END=68691980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 68691981 . A . PASS END=68691981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:30,0 chr2 68691982 . T . PASS END=68691982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr2 68691983 . A . PASS END=68691983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr2 68691984 . A . PASS END=68691990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:34,0 chr2 68691991 . T . PASS END=68691991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr2 68691992 . C . PASS END=68691995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:34,0 chr2 68691996 . A . PASS END=68691996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:32,0 chr2 68691997 . T . PASS END=68692277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:88:32:0,88,1148:0,88,255:40,0 chr2 68694864 . A . PASS END=68694865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr2 68694866 . G . PASS END=68694921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:17,0 chr2 68694922 . C . PASS END=68694930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 68694931 . C . PASS END=68694931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 68694932 . G . PASS END=68694953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr2 68694954 . C . PASS END=68694959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 68717322 . A . PASS END=68717393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:61:0,120,1800:0,179,255:40,0 chr2 68729863 . A . PASS END=68730035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:34:0,90,1141:0,94,255:40,0 chr2 68740212 . A . PASS END=68740359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,102,1425:0,104,255:40,0 chr2 68740680 . T . PASS END=68740816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:40:0,93,1395:0,104,255:40,0 chr2 68753193 . G . PASS END=68753374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:96:40:0,96,1440:0,104,255:40,0 chr2 68762415 . A . PASS END=68762453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,125,255:40,0 chr2 68765004 . G . PASS END=68765004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 68765005 . A . PASS END=68765005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 68765006 . A . PASS END=68765349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:29:0,85,1057:0,85,255:40,0 chr2 68765350 . A . PASS END=68765350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:30,0 chr2 68765351 . C . PASS END=68765359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1260:0,91,255:28,0 chr2 68772319 . G . PASS END=68772327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr2 68772328 . T . PASS END=68772435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:34:0,87,1305:0,102,255:40,0 chr2 68772436 . C . PASS END=68772444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr2 68794473 . G . PASS END=68794519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,183,255:40,0 chr2 68804952 . T . PASS END=68805154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:94:43:0,94,1389:0,94,255:40,0 chr2 68872954 . A . PASS END=68873194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:88:40:0,88,1431:0,88,255:40,0 chr2 68873195 . T . PASS END=68873195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1302:0,48,255:36,0 chr2 68873196 . C . PASS END=68873308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:39:0,87,1408:0,87,255:40,1 chr2 68873309 . A . PASS END=68873309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1424:0,77,255:36,0 chr2 68873310 . G . PASS END=68873400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:33:0,85,1158:0,85,255:40,0 chr2 68873401 . G . PASS END=68873401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:29,0 chr2 68873402 . T . PASS END=68873411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1109:0,80,255:30,0 chr2 68873412 . T . PASS END=68873416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 68873417 . T . PASS END=68873420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 68873421 . G . PASS END=68873438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,947:0,64,255:26,0 chr2 68882012 . G . PASS END=68882015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 68882016 . C . PASS END=68882016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:17,0 chr2 68882017 . T . PASS END=68882021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:19,0 chr2 68882022 . A . PASS END=68882022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,621:0,19,255:16,0 chr2 68882023 . T . PASS END=68882024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,768:0,52,255:19,0 chr2 68882025 . G . PASS END=68882029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 68882030 . T . PASS END=68882030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,765:0,22,255:20,0 chr2 68882031 . C . PASS END=68882042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,68,255:26,0 chr2 68882043 . C . PASS END=68882047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 68882048 . G . PASS END=68882048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:27,0 chr2 68882049 . A . PASS END=68882051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:28,0 chr2 68882052 . T . PASS END=68882061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr2 68882062 . C . PASS END=68882072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr2 68882073 . A . PASS END=68882073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 68882074 . T . PASS END=68882120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1041:0,83,255:32,0 chr2 68882121 . T . PASS END=68882121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1106:0,52,255:27,0 chr2 68882122 . A . PASS END=68882152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1284:0,84,255:37,0 chr2 68882153 . C . PASS END=68882153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:34,0 chr2 68882154 . A . PASS END=68882156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1201:0,94,255:36,0 chr2 68882157 . A . PASS END=68882157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1150:0,56,255:35,0 chr2 68882158 . G . PASS END=68882172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:36:0,97,1260:0,97,255:36,0 chr2 68882173 . T . PASS END=68882173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:32,0 chr2 68882174 . C . PASS END=68882176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr2 68882177 . C . PASS END=68882177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr2 68882178 . G . PASS END=68882198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,92,255:35,0 chr2 68882199 . C . PASS END=68882199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:33,0 chr2 68882200 . A . PASS END=68882200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1257:0,89,255:34,0 chr2 68882201 . G . PASS END=68882201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1149:0,50,255:33,0 chr2 68882202 . C . PASS END=68882217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1272:0,89,255:36,0 chr2 68882218 . C . PASS END=68882218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:30,0 chr2 68882219 . C . PASS END=68882219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 68882220 . T . PASS END=68882220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:31,0 chr2 68882221 . A . PASS END=68882225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1217:0,86,255:31,0 chr2 68882226 . C . PASS END=68882226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 68882227 . T . PASS END=68882228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1180:0,96,255:32,0 chr2 68882229 . T . PASS END=68882229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:31,0 chr2 68882230 . T . PASS END=68882235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr2 68882236 . T . PASS END=68882236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:31,0 chr2 68882237 . T . PASS END=68882262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr2 68882263 . T . PASS END=68882265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,90,255:25,0 chr2 68882266 . C . PASS END=68882268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 68882269 . T . PASS END=68882270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 68882271 . A . PASS END=68882274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:39:0,90,1350:0,104,255:32,0 chr2 68882275 . T . PASS END=68882275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr2 68882276 . G . PASS END=68882280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:32,0 chr2 68882281 . A . PASS END=68882281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:32,0 chr2 68882282 . T . PASS END=68882389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1291:0,87,255:40,0 chr2 68882390 . C . PASS END=68882390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:39,0 chr2 68882391 . A . PASS END=68882430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:39:0,80,1385:0,80,255:40,0 chr2 68882431 . G . PASS END=68882467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1227:0,88,255:37,0 chr2 68882468 . T C, 46.11 PASS DP=37;MQ=241.92;MQRankSum=-0.503;ReadPosRankSum=2.061;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,14,0:0.389,0.000:36:13,6,0:9,8,0:45:81,0,50,501,779,1279:255,0,255:22,0:4.6109e+01,1.2814e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,7,7:7,15,7,7 chr2 68882469 . G . PASS END=68882505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,101,1388:0,101,255:40,0 chr2 68882506 . T . PASS END=68882623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:38:0,93,1463:0,93,255:40,0 chr2 68882624 . T . PASS END=68882639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1215:0,101,255:37,0 chr2 68882640 . G . PASS END=68882659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr2 68882660 . A . PASS END=68882660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 68882661 . A G, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=1.796;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:5,9,0:6,4,0:48:85,0,50,465,393,858:255,0,255:10,0:5.0000e+01,6.7045e-05,5.2640e+01,4.5000e+02,4.2793e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,3,10:5,6,5,8 chr2 68882662 . T . PASS END=68882670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 68882671 . C . PASS END=68882675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 68882676 . A . PASS END=68882676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 68882677 . C . PASS END=68882677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 68882678 . C . PASS END=68882698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:17,0 chr2 68882699 . A . PASS END=68882706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 68882707 . A . PASS END=68882708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 68962332 . A . PASS END=68962392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:104:0,120,1800:0,255,255:40,0 chr2 68995131 . A . PASS END=68995203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,134,255:40,0 chr2 69002313 . A . PASS END=69002318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:30,0 chr2 69002319 . C . PASS END=69002320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr2 69002321 . C . PASS END=69002332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:29,0 chr2 69002333 . C . PASS END=69002333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 69002334 . T . PASS END=69002448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1072:0,81,255:39,0 chr2 69002449 . T . PASS END=69002449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:31,0 chr2 69002450 . G . PASS END=69002474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1231:0,99,255:33,0 chr2 69002475 . A . PASS END=69002475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1072:0,44,255:28,0 chr2 69002476 . A . PASS END=69002477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 69002478 . T . PASS END=69002478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1108:0,49,255:28,0 chr2 69002479 . G . PASS END=69002483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 69002484 . C . PASS END=69002495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1041:0,74,255:26,0 chr2 69002496 . G . PASS END=69002496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 69002497 . T . PASS END=69002502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr2 69002503 . G . PASS END=69002524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 69002525 . C . PASS END=69002552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr2 69002737 . T . PASS END=69002755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr2 69002756 . A . PASS END=69002759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 69002760 . C T, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=3.134;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,11,0:0.524,0.000:21:3,6,0:7,5,0:48:85,0,50,393,358,751:255,0,255:8,0:5.0000e+01,6.5751e-05,5.2897e+01,3.9345e+02,3.9243e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,5,6:5,5,4,7 chr2 69002761 . G . PASS END=69002769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 69002770 . G . PASS END=69002797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 69002798 . A . PASS END=69002807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 69002808 . C . PASS END=69002818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 69009365 . G . PASS END=69009452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:53:0,120,1800:0,125,255:40,0 chr2 69014972 . C . PASS END=69014989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:12,0 chr2 69014990 . G . PASS END=69015029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:15:0,43,535:0,43,255:19,0 chr2 69015030 . G . PASS END=69015035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 69015036 . G . PASS END=69015036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 69015037 . A . PASS END=69015052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 69015053 . A . PASS END=69015088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,675:0,43,255:19,0 chr2 69027065 . A . PASS END=69027071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:21,0 chr2 69027072 . A . PASS END=69027072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 69027073 . C . PASS END=69027090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:67:23:0,67,869:0,67,255:27,0 chr2 69027091 . G . PASS END=69027098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 69027099 . T . PASS END=69027099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 69027100 . G . PASS END=69027105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:30,0 chr2 69027106 . T . PASS END=69027106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 69027107 . G . PASS END=69027108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:30,0 chr2 69027109 . C . PASS END=69027109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 69027110 . T . PASS END=69027138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1125:0,83,255:32,0 chr2 69027139 . G . PASS END=69027139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 69027140 . G . PASS END=69027149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 69027150 . G . PASS END=69027150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 69027151 . G . PASS END=69027159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1149:0,93,255:31,0 chr2 69027160 . C . PASS END=69027164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 69027165 . T . PASS END=69027165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 69027166 . C . PASS END=69027166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 69027167 . C . PASS END=69027168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 69027169 . A . PASS END=69027172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 69027173 . A . PASS END=69027176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 69034363 . A . PASS END=69034612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:33:0,81,1215:0,89,255:40,0 chr2 69040419 . A . PASS END=69040420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 69040421 . A . PASS END=69040421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:22,0 chr2 69040422 . C . PASS END=69040427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 69040428 . T . PASS END=69040535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:31:0,82,1203:0,82,255:40,0 chr2 69040536 . T . PASS END=69040536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:32,0 chr2 69040537 . G . PASS END=69040548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:33,0 chr2 69040549 . A . PASS END=69040551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:25,0 chr2 69043286 . A . PASS END=69043297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:32,0 chr2 69043298 . A . PASS END=69043298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1210:0,61,255:32,0 chr2 69043299 . G . PASS END=69043310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:34,0 chr2 69043311 . A . PASS END=69043408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:37:0,93,1456:0,93,255:40,1 chr2 69043421 . G . PASS END=69043494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:39:0,86,1440:0,86,255:40,0 chr2 69045005 . G . PASS END=69045017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:33,0 chr2 69045018 . A . PASS END=69045018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr2 69045019 . T . PASS END=69045038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:86:34:0,86,1210:0,86,255:40,0 chr2 69045039 . A . PASS END=69045039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1404:0,79,255:40,0 chr2 69045040 . A . PASS END=69045120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:34:0,96,1440:0,102,255:40,0 chr2 69045121 . T . PASS END=69045126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:31,0 chr2 69046255 . G . PASS END=69046259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 69046260 . C . PASS END=69046324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:19,0 chr2 69046325 . G . PASS END=69046354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,919:0,72,255:26,0 chr2 69046355 . A . PASS END=69046362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,999:0,81,255:28,0 chr2 69046363 . C . PASS END=69046363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 69046364 . C . PASS END=69046385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,974:0,84,255:28,0 chr2 69046386 . A . PASS END=69046389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 69046390 . C . PASS END=69046402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 69046403 . T . PASS END=69046404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 69046405 . C . PASS END=69046428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:28,0 chr2 69046429 . G . PASS END=69046429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 69046430 . G . PASS END=69046430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 69046431 . A . PASS END=69046431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 69046432 . C . PASS END=69046446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1147:0,90,255:32,0 chr2 69046447 . G . PASS END=69046447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:29,0 chr2 69046448 . C . PASS END=69046648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1246:0,89,255:40,0 chr2 69046649 . A . PASS END=69046649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:33,2 chr2 69049472 . A . PASS END=69049472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,816:0,61,255:23,0 chr2 69049473 . C . PASS END=69049473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,750:0,58,255:23,0 chr2 69049474 . A . PASS END=69049474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 69049475 . A . PASS END=69049475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,713:0,28,255:22,0 chr2 69049476 . G . PASS END=69049488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 69049489 . A . PASS END=69049514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:35,0 chr2 69049515 . G . PASS END=69049560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:36:0,80,1205:0,80,255:38,0 chr2 69049561 . A . PASS END=69049561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:33,0 chr2 69049562 . G . PASS END=69049807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:91:34:0,91,1234:0,91,255:40,0 chr2 69049808 . C . PASS END=69049808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1396:0,65,255:35,0 chr2 69049809 . C . PASS END=69049903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:39:0,82,1437:0,82,255:40,0 chr2 69049904 . A . PASS END=69049940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,136,255:40,0 chr2 69049941 . T C, 50.00 PASS DP=57;MQ=249.98;MQRankSum=6.033;ReadPosRankSum=4.179;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,30,0:0.526,0.000:57:13,13,0:14,17,0:48:85,0,50,1065,958,2023:255,0,255:23,0:5.0000e+01,6.6269e-05,5.2768e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,19,15,15:12,15,14,16 chr2 69049942 . G . PASS END=69049975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,114,1789:0,114,255:40,0 chr2 69049976 . A . PASS END=69049976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:76:49:0,76,1696:0,76,255:40,0 chr2 69049977 . A . PASS END=69049978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:49:0,114,1743:0,114,255:40,0 chr2 69049979 . C . PASS END=69050004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:39:0,87,1410:0,87,255:40,0 chr2 69053119 . C . PASS END=69053326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:38:0,84,1404:0,84,255:40,0 chr2 69092763 . C . PASS END=69093638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:34:0,87,1228:0,87,255:40,0 chr2 69093639 . G . PASS END=69093639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:30,0 chr2 69093640 . G . PASS END=69093650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:32,0 chr2 69093651 . G . PASS END=69093664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 69093665 . T . PASS END=69093665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:23,0 chr2 69093666 . T . PASS END=69093685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:22:0,62,792:0,62,255:25,0 chr2 69093686 . C . PASS END=69093686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr2 69093687 . C . PASS END=69093687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 69093688 . G . PASS END=69093688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 69093689 . G . PASS END=69093689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 69093690 . C . PASS END=69093690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 69093691 . T . PASS END=69093703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,720:0,47,255:19,0 chr2 69098157 . C . PASS END=69098160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,870:0,75,255:25,0 chr2 69098161 . A . PASS END=69098161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 69098162 . T . PASS END=69098164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr2 69098165 . T . PASS END=69098165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:24,0 chr2 69098166 . T . PASS END=69098170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,893:0,75,255:25,0 chr2 69098171 . C . PASS END=69098171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 69098172 . T . PASS END=69098172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 69098173 . C . PASS END=69098186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1172:0,83,255:35,0 chr2 69098187 . C . PASS END=69098187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 69098188 . A . PASS END=69098260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:35:0,87,1263:0,87,255:40,0 chr2 69098261 . G . PASS END=69098261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:36,0 chr2 69098262 . C . PASS END=69098262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:42:0,88,1543:0,88,255:37,0 chr2 69098263 . T . PASS END=69098263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:36,0 chr2 69098264 . G . PASS END=69098271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1397:0,81,255:39,0 chr2 69098272 . C . PASS END=69098272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:37,0 chr2 69098273 . G . PASS END=69098280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1404:0,81,255:39,0 chr2 69098281 . G . PASS END=69098282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:34,0 chr2 69098283 . C . PASS END=69098287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1300:0,81,255:34,0 chr2 69098288 . A . PASS END=69098288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1222:0,75,255:30,0 chr2 69098289 . G . PASS END=69098289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:39:0,86,1390:0,86,255:32,0 chr2 69098290 . G . PASS END=69098290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:32,0 chr2 69098291 . T . PASS END=69098291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1234:0,81,255:32,0 chr2 69098292 . T . PASS END=69098296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1288:0,72,255:32,0 chr2 69098297 . G . PASS END=69098303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1263:0,89,255:34,0 chr2 69098304 . G . PASS END=69098304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr2 69098305 . A . PASS END=69098305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1097:0,85,255:33,0 chr2 69098306 . A . PASS END=69098306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:34,0 chr2 69098307 . A . PASS END=69098393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1241:0,87,255:40,2 chr2 69098394 . C . PASS END=69098394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1543:0,66,255:40,2 chr2 69098395 . C . PASS END=69098467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:43:0,81,1215:0,93,255:40,0 chr2 69098468 . A . PASS END=69098472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:38:0,60,900:0,101,255:25,0 chr2 69098473 . C . PASS END=69098490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:18,0 chr2 69148380 . A . PASS END=69148391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,186,255:40,0 chr2 69149637 . G . PASS END=69149690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,119,1651:0,119,255:40,0 chr2 69149872 . A . PASS END=69149999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:31:0,84,1260:0,93,255:40,0 chr2 69150000 . C . PASS END=69150006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr2 69151689 . G . PASS END=69151782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1080:0,80,255:39,0 chr2 69151783 . C . PASS END=69151796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:25:0,69,1035:0,75,255:26,0 chr2 69152817 . G . PASS END=69152827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 69152828 . T . PASS END=69152828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 69152829 . T . PASS END=69152856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,568:0,48,255:19,0 chr2 69152857 . C . PASS END=69152857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:19,0 chr2 69152858 . T . PASS END=69152918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,685:0,60,255:25,0 chr2 69152919 . A . PASS END=69152919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 69152920 . G . PASS END=69152930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 69152931 . A . PASS END=69152958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 69153872 . G . PASS END=69153895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:97:38:0,97,1305:0,97,255:40,0 chr2 69153896 . A . PASS END=69153896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1275:0,68,255:40,0 chr2 69153897 . T . PASS END=69153917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:43:0,96,1518:0,96,255:40,0 chr2 69153918 . T . PASS END=69153918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:38,0 chr2 69153919 . C . PASS END=69153966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1181:0,86,255:39,0 chr2 69172500 . C . PASS END=69172582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,120,1800:0,126,255:40,0 chr2 69173422 . T . PASS END=69173592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:90:42:0,90,1350:0,99,255:40,0 chr2 69174279 . C . PASS END=69174283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1319:0,105,255:37,0 chr2 69174284 . T . PASS END=69174284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:35,0 chr2 69174285 . C . PASS END=69174385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1215:0,103,255:40,0 chr2 69174386 . A . PASS END=69174389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,108,255:25,0 chr2 69177258 . A . PASS END=69177379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,111,1468:0,118,255:40,0 chr2 69177380 . T . PASS END=69177380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1496:0,77,255:37,0 chr2 69177381 . G . PASS END=69177385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:42:0,98,1523:0,98,255:38,0 chr2 69177386 . T . PASS END=69177386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1311:0,62,255:35,0 chr2 69177387 . G . PASS END=69177395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:38,0 chr2 69177834 . C . PASS END=69177887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:71:0,120,1800:0,186,255:40,0 chr2 69179982 . A . PASS END=69179993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 69201768 . A . PASS END=69201821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:72:0,120,1800:0,177,255:40,0 chr2 69204627 . A . PASS END=69204680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,141,255:40,0 chr2 69204769 . A . PASS END=69204865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:35:0,96,1440:0,102,255:40,0 chr2 69204866 . A . PASS END=69204866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 69204867 . C . PASS END=69204884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:32,0 chr2 69204885 . T . PASS END=69204885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 69204886 . T . PASS END=69204886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 69204887 . C . PASS END=69204903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,64,255:26,0 chr2 69204904 . A . PASS END=69204906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 69206003 . G . PASS END=69206113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:97:35:0,97,1335:0,97,255:40,0 chr2 69207045 . C . PASS END=69207192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:31:0,89,1194:0,89,255:40,2 chr2 69207861 . A . PASS END=69207948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:35:0,81,1440:0,81,255:40,2 chr2 69207949 . G . PASS END=69207949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 69207950 . A . PASS END=69207955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:33:0,88,1205:0,88,255:32,0 chr2 69240632 . A . PASS END=69240640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 69240641 . G . PASS END=69240679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,498:0,41,255:19,0 chr2 69240680 . T . PASS END=69240680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:18,0 chr2 69240681 . C . PASS END=69240686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 69240687 . C . PASS END=69240688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 69240689 . A . PASS END=69240701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 69240702 . T . PASS END=69240712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 69240713 . C . PASS END=69240724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,656:0,63,255:21,0 chr2 69240725 . A . PASS END=69240773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 69240774 . T . PASS END=69240783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,495:0,32,255:12,0 chr2 69267176 . A . PASS END=69267247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:80:0,120,1800:0,185,255:40,0 chr2 69271874 . C . PASS END=69271945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:82:0,120,1800:0,242,255:40,0 chr2 69297779 . A . PASS END=69297860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:97:42:0,97,1613:0,97,255:40,0 chr2 69298886 . G . PASS END=69298919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,1:116:99:113:0,120,1800:0,255,255:40,0 chr2 69300154 . G . PASS END=69300233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,165,255:40,0 chr2 69302722 . G . PASS END=69302790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,171,255:40,0 chr2 69304540 . C . PASS END=69304620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:36:0,105,1568:0,108,255:40,0 chr2 69317991 . A . PASS END=69318051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,157,255:40,0 chr2 69329974 . A . PASS END=69330056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:31:0,88,1119:0,88,255:40,0 chr2 69330057 . G . PASS END=69330057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:30,0 chr2 69330058 . A . PASS END=69330067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:38:0,87,1305:0,101,255:31,0 chr2 69330068 . A . PASS END=69330072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr2 69350149 . A . PASS END=69350218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,150,255:40,0 chr2 69351697 . G . PASS END=69351770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:48:0,84,1260:0,128,255:40,0 chr2 69351771 . A . PASS END=69351774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:60:35:0,60,900:0,92,255:20,0 chr2 69351775 . T . PASS END=69351775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:57:35:0,57,855:0,105,255:19,0 chr2 69357242 . G . PASS END=69357301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,104,1430:0,104,255:40,0 chr2 69362127 . G . PASS END=69362219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,115,1521:0,115,255:40,0 chr2 69371417 . G . PASS END=69371458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1336:0,87,255:39,0 chr2 69372458 . A . PASS END=69372508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,120,1800:0,143,255:40,0 chr2 69379301 . T . PASS END=69379396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:48:0,96,1440:0,117,255:40,0 chr2 69397380 . A . PASS END=69397387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 69397388 . G . PASS END=69397388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 69397389 . G . PASS END=69397390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 69397391 . G . PASS END=69397391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 69397392 . G . PASS END=69397416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,953:0,68,255:26,0 chr2 69397417 . G . PASS END=69397417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 69397418 . T . PASS END=69397421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 69399499 . G . PASS END=69399516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,232,255:40,0 chr2 69408918 . G . PASS END=69408977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1097:0,85,255:38,0 chr2 69408978 . G . PASS END=69408978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:27,0 chr2 69408979 . G . PASS END=69408990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 69408991 . T . PASS END=69408991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 69408992 . T . PASS END=69408993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 69408994 . G . PASS END=69409008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr2 69409009 . T . PASS END=69409013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:19,0 chr2 69409625 . G . PASS END=69409636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:31,0 chr2 69409637 . G . PASS END=69409638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:36:35:0,36,1053:0,36,255:34,2 chr2 69409639 . A . PASS END=69409643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:35,0 chr2 69409644 . G . PASS END=69409644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1181:0,74,255:34,0 chr2 69409645 . C . PASS END=69409671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,104,1327:0,104,255:40,0 chr2 69409672 . A . PASS END=69409672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:36,0 chr2 69409673 . A . PASS END=69409679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:39,0 chr2 69409680 . A . PASS END=69409680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1313:0,78,255:38,0 chr2 69409681 . G . PASS END=69409763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,90,255:40,0 chr2 69409764 . C . PASS END=69409774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr2 69409775 . T . PASS END=69409786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:19:0,42,630:0,57,255:18,0 chr2 69409787 . A . PASS END=69409792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:15:0,33,495:0,45,255:13,0 chr2 69420467 . G . PASS END=69420547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,124,255:40,0 chr2 69472345 . A . PASS END=69472345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 69472357 . G . PASS END=69472363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,884:0,69,255:26,0 chr2 69472364 . G . PASS END=69472386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:32,0 chr2 69472387 . A . PASS END=69472387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:31,0 chr2 69472388 . A . PASS END=69472398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:32,0 chr2 69472399 . G . PASS END=69472399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:31,0 chr2 69472400 . C . PASS END=69472419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr2 69472420 . G . PASS END=69472429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,73,255:25,0 chr2 69472430 . C . PASS END=69472440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 69472441 . C . PASS END=69472447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 69472448 . C . PASS END=69472458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,50,255:19,0 chr2 69472459 . A . PASS END=69472480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:11:0,30,450:0,31,255:13,0 chr2 69472481 . A . PASS END=69472482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 69472483 . T . PASS END=69472491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:10:0,18,270:0,30,255:6,0 chr2 69472492 . C . LowGQ END=69472546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,39:0,0,46:3,0 chr2 69472547 . C . PASS END=69472617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr2 69546943 . C . PASS END=69546943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr2 69547037 . C . PASS END=69547037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr2 69547185 . G . PASS END=69547185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 69547195 . T . PASS END=69547195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 69547219 . A . PASS END=69547219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1366:0,100,255:36,0 chr2 69547282 . C . PASS END=69547282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 69547305 . G . PASS END=69547305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 69547419 . A . PASS END=69547419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 69547437 . T . PASS END=69547437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 69547501 . G . PASS END=69547501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 69547521 . C . PASS END=69547521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 69547557 . T . PASS END=69547557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 69547608 . A . PASS END=69547608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 69547648 . G . PASS END=69547648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 69547884 . C . PASS END=69547884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr2 69547889 . C . PASS END=69547889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:18:0,27,405:0,54,255:9,0 chr2 69547919 . CA C,CAA, 7.87 PASS DP=20;MQ=245.47;MQRankSum=1.429;ReadPosRankSum=-0.204;FractionInformativeReads=0.950;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,2,0:0.421,0.105,0.000:19:6,3,2,0:3,5,0,0:8:15,0,36,42,37,92,35,45,86,79:255,0,255:9,14:7.8749e+00,7.7436e-01,3.9669e+01,4.2500e+01,4.6019e+01,9.5500e+01,6.2776e+01,8.0413e+01,1.2105e+02,1.0955e+02:0.00,8.00,11.00,8.00,16.00,11.00,34.77,42.77,42.77,37.77:5,4,4,6:4,5,5,5 chr2 69547931 . A . PASS END=69547931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 69547967 . C . PASS END=69547968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,854:0,64,255:24,0 chr2 69547996 . A . PASS END=69547996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1150:0,78,255:30,0 chr2 69548017 . G . PASS END=69548017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1133:0,50,255:29,3 chr2 69548060 . C . PASS END=69548060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 69548122 . A . PASS END=69548122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:34,0 chr2 69548317 . C . PASS END=69548317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr2 69548491 . T . PASS END=69548491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 69548560 . C . PASS END=69548560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1396:0,111,255:37,0 chr2 69548597 . T . PASS END=69548597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 69548671 . T . PASS END=69548671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 69548801 . C . PASS END=69548801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 69548946 . T . PASS END=69548946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 69549062 . G . PASS END=69549062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1596:0,113,255:40,0 chr2 69549091 . G . PASS END=69549092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1419:0,96,255:40,0 chr2 69549200 . T . PASS END=69549200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,206,255:40,0 chr2 69549400 . G . PASS END=69549400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 69549515 . A . PASS END=69549515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 69549642 . C . PASS END=69549642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,168,255:40,0 chr2 69549742 . A . PASS END=69549742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 69549745 . T . PASS END=69549745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,190,255:40,0 chr2 69549883 . T . PASS END=69549883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 69549936 . C . PASS END=69549936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 69549976 . G . PASS END=69549976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr2 69550034 . C . PASS END=69550034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 69550230 . T G, 169.94 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,18,0:0,23,0:120:208,123,0,1560,123,1560:255,123,0:0,0:1.6994e+02,1.1994e+02,0.0000e+00,4.5000e+02,1.5471e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,20:0,0,20,21 chr2 69550231 . C . PASS END=69550231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 69550300 . A . PASS END=69550300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 69550302 . C . PASS END=69550302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr2 69550563 . C . PASS END=69550563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 69550599 . G . PASS END=69550599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 69550601 . G . PASS END=69550601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr2 69550687 . G . PASS END=69550687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 69550699 . C . PASS END=69550699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 69551304 . T . PASS END=69551304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,255,255:40,0 chr2 69551420 . T . PASS END=69551420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 69551452 . T . PASS END=69551452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr2 69551580 . G . PASS END=69551580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 69551583 . G . PASS END=69551583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 69551682 . T . PASS END=69551682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 69551781 . T . PASS END=69551781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,120,1800:0,178,255:40,0 chr2 69551857 . T . PASS END=69551857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 69551860 . A . PASS END=69551860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,233,255:40,0 chr2 69551896 . G . PASS END=69551896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr2 69551920 . C . PASS END=69551920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr2 69552153 . G . PASS END=69552153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 69552231 . C . PASS END=69552231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 69552238 . T . PASS END=69552238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 69552264 . C . PASS END=69552264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr2 69552344 . A . PASS END=69552344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 69552502 . A . PASS END=69552502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1119:0,82,255:31,0 chr2 69552632 . T . PASS END=69552632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 69552655 . A . PASS END=69552655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr2 69552686 . C . PASS END=69552686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:44:0,96,1440:0,132,255:32,0 chr2 69552867 . A . PASS END=69552867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 69552926 . G . PASS END=69552926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 69552938 . A . PASS END=69552938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 69553049 . A . PASS END=69553049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 69553125 . C . PASS END=69553125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1396:0,98,255:37,0 chr2 69553135 . C . PASS END=69553135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1413:0,114,255:38,0 chr2 69553145 . G . PASS END=69553145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1437:0,117,255:39,0 chr2 69553152 . G . PASS END=69553152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 69553209 . G . PASS END=69553209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 69553235 . G . PASS END=69553235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 69553269 . G . PASS END=69553269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:54:0,107,1878:0,107,255:40,0 chr2 69553299 . G . PASS END=69553299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,203,255:40,0 chr2 69553320 . C . PASS END=69553326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:82:0,120,1800:0,139,255:40,0 chr2 69553327 . T . PASS END=69553348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:81:98:0,81,1215:0,212,255:40,0 chr2 69553349 . T . PASS END=69553352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,2:100:63:99:0,63,945:0,248,255:25,0 chr2 69553353 . G . PASS END=69553363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:42:96:0,42,630:0,225,255:19,0 chr2 69553364 . A . PASS END=69553364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:39:96:0,39,585:0,255,255:13,0 chr2 69553365 . C . PASS END=69553365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,3:97:42:97:0,42,630:0,197,255:11,0 chr2 69553374 . A . PASS END=69553374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:33:96:0,33,495:0,249,255:11,4 chr2 69553375 . GAA GA,G, 165.90 PASS DP=93;MQ=249.09;MQRankSum=5.011;ReadPosRankSum=1.486;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:10,71,11,0:0.772,0.120,0.000:92:6,39,4,0:4,32,7,0:116:180,119,0,532,132,190,632,632,632,632:255,0,45:7,126:1.6590e+02,1.1590e+02,0.0000e+00,4.5000e+02,1.4014e+02,1.9014e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,11.00,14.01,11.00,22.00,14.01,34.77,45.77,45.77,37.78:4,6,40,42:2,8,55,27 chr2 69554043 . T . PASS END=69554043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1219:0,88,255:33,0 chr2 69554046 . A . PASS END=69554207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:86:39:0,86,1224:0,86,255:40,0 chr2 69555403 . C . PASS END=69555570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:95:37:0,95,1357:0,95,255:40,0 chr2 69556429 . C . PASS END=69556556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:40:0,104,1465:0,104,255:40,0 chr2 69556811 . T . PASS END=69556811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 69556816 . C . PASS END=69556887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:53:0,120,1800:0,146,255:40,0 chr2 69556888 . T . PASS END=69556920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:47:0,87,1305:0,119,255:40,0 chr2 69556921 . T . PASS END=69556924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:72:47:0,72,1080:0,125,255:25,0 chr2 69556925 . A G, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.645;ReadPosRankSum=2.534;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,24,0:0.545,0.000:44:12,10,0:8,14,0:48:85,0,49,857,668,1525:255,0,255:11,0:5.0000e+01,6.9375e-05,5.2239e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,8,16:6,14,14,10 chr2 69556926 . T . PASS END=69556930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:66:40:0,66,990:0,107,255:25,0 chr2 69565030 . C . PASS END=69565184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:81:34:0,81,1181:0,86,255:40,0 chr2 69565185 . C . PASS END=69565187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 69565574 . C . PASS END=69565574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 69565577 . C . PASS END=69565609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,133,255:40,0 chr2 69565610 . G . PASS END=69565697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:41:0,90,1447:0,90,255:40,0 chr2 69569272 . A . PASS END=69569272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 69569284 . T . PASS END=69569327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,3:74:82:61:0,82,1800:0,82,255:40,0 chr2 69569328 . A . LowGQ END=69569328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,14:80:0:80:0,0,1810:7,0,255:40,0 chr2 69569329 . A . PASS END=69569337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:81:0,120,1800:0,213,255:40,0 chr2 69569338 . T . PASS END=69569338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,10:82:57:82:0,57,2072:0,57,255:40,0 chr2 69569339 . C . PASS END=69569382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:53:0,107,1800:0,107,255:40,0 chr2 69573035 . C . PASS END=69573066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,128,255:40,0 chr2 69573067 . C . PASS END=69573131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,120,1800:0,150,255:40,0 chr2 69573141 . T . PASS END=69573141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1710:0,144,255:38,0 chr2 69575303 . C . PASS END=69575324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,847:0,61,255:25,0 chr2 69575325 . C . PASS END=69575335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:32,0 chr2 69575336 . T . PASS END=69575336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,940:0,63,255:30,0 chr2 69575337 . T . PASS END=69575342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1200:0,83,255:32,0 chr2 69575343 . A . PASS END=69575343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1107:0,66,255:30,0 chr2 69575344 . G . PASS END=69575439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1267:0,87,255:40,0 chr2 69575440 . A . PASS END=69575440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:34,0 chr2 69575441 . C . PASS END=69575442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 69575443 . C . PASS END=69575443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1233:0,64,255:32,0 chr2 69575444 . G . PASS END=69575454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1161:0,94,255:33,0 chr2 69575455 . T . PASS END=69575466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:27:0,63,945:0,68,255:26,0 chr2 69577204 . G . PASS END=69577204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 69577210 . C . PASS END=69577312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:30:0,81,1141:0,83,255:40,0 chr2 69577313 . T . PASS END=69577313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 69577314 . G . PASS END=69577315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 69581390 . C . PASS END=69581444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,148,255:40,0 chr2 69581446 . T . PASS END=69581446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 69581621 . C . PASS END=69581700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,120,1800:0,123,255:40,0 chr2 69581703 . G . PASS END=69581703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 69583628 . C . PASS END=69583689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,147,255:40,0 chr2 69585461 . C . PASS END=69585595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,99,1485:0,103,255:40,0 chr2 69586395 . C . PASS END=69586395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 69586400 . C . PASS END=69586407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,205,255:40,0 chr2 69586408 . T . PASS END=69586458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,147,255:40,0 chr2 69590677 . C . PASS END=69590797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:29:0,82,1141:0,82,255:40,0 chr2 69590798 . T . PASS END=69590802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr2 69590812 . A . PASS END=69590812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 69590814 . G . PASS END=69590814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 69597133 . T . PASS END=69597240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,119,1800:0,119,255:40,0 chr2 69598546 . T . PASS END=69598547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 69598548 . A . PASS END=69598548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 69598549 . T . PASS END=69598555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1052:0,87,255:33,0 chr2 69598556 . T A, 145.85 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,17,0:0,16,0:96:184,99,0,1227,99,1234:255,99,0:0,0:1.4585e+02,9.5851e+01,0.0000e+00,4.5000e+02,1.3063e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,15:0,0,16,17 chr2 69598557 . C . PASS END=69598593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1156:0,83,255:36,0 chr2 69598594 . G . PASS END=69598604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1149:0,91,255:36,0 chr2 69601138 . C . PASS END=69601245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1015:0,81,255:40,0 chr2 69610056 . C . PASS END=69610066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,125,255:40,0 chr2 69610067 . G . PASS END=69610103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,123,255:40,0 chr2 69610104 . A G, 49.89 PASS DP=50;MQ=250.00;MQRankSum=6.049;ReadPosRankSum=4.185;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,24,0:0.480,0.000:50:11,8,0:15,16,0:48:85,0,50,858,893,1751:255,0,255:23,0:4.9892e+01,6.6269e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,13,9,15:12,14,13,11 chr2 69610105 . A . PASS END=69610137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,114,1710:0,122,255:40,0 chr2 69614197 . C . PASS END=69614198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 69614199 . C . PASS END=69614203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:24,0 chr2 69614235 . G . PASS END=69614235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 69614237 . G . PASS END=69614237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr2 69614283 . A . PASS END=69614283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 69614328 . G . PASS END=69614328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 69614346 . C . PASS END=69614346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:37:0,93,1395:0,95,255:30,0 chr2 69614356 . C . PASS END=69614356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 69623275 . C . PASS END=69623275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr2 69623378 . T . PASS END=69623422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:87:0,120,1800:0,234,255:40,0 chr2 69626485 . T . PASS END=69626514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,117,1755:0,133,255:40,0 chr2 69627495 . C . PASS END=69627497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 69627498 . G . PASS END=69627659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1203:0,87,255:40,0 chr2 69627660 . G . PASS END=69627660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 69627661 . C . PASS END=69627662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 69627663 . C . PASS END=69627670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,80,255:26,0 chr2 69633149 . C . PASS END=69633149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,136,255:40,0 chr2 69633154 . C . PASS END=69633215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,150,255:40,0 chr2 69642317 . C . PASS END=69642431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,131,255:40,0 chr2 69646670 . C . PASS END=69646736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:73:0,120,1800:0,196,255:40,0 chr2 69646738 . T . PASS END=69646738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 69646748 . G . PASS END=69646748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:76:0,120,1800:0,195,255:40,0 chr2 69650714 . C . PASS END=69650714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1219:0,88,255:33,0 chr2 69650715 . T . PASS END=69650715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:33,0 chr2 69650716 . A . PASS END=69650845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1173:0,83,255:40,0 chr2 69650846 . C . PASS END=69650849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 69650862 . A . PASS END=69650862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 69659026 . A . PASS END=69659026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 69659034 . C . PASS END=69659088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,109,1778:0,109,255:40,0 chr2 69659089 . C . PASS END=69659125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:87:34:0,87,1305:0,92,255:40,0 chr2 69659126 . A T, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=3.097;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,20,0:0.588,0.000:34:4,9,0:10,11,0:47:85,0,48,715,498,1213:255,0,255:13,0:5.0000e+01,8.0506e-05,5.0688e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,8,12:7,7,15,5 chr2 69659127 . T . PASS END=69659132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 69659133 . A . PASS END=69659133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 69659134 . G . PASS END=69659137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 69664483 . C . PASS END=69664483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 69664493 . C . PASS END=69664496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 69664497 . T . PASS END=69664497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 69664498 . G . PASS END=69664506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 69664507 . G . PASS END=69664508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 69664509 . C . PASS END=69664549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,996:0,84,255:35,0 chr2 69664550 . G . PASS END=69664550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr2 69664551 . C . PASS END=69664555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:33,0 chr2 69664561 . C . PASS END=69664561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 69664595 . G . PASS END=69664595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 69664620 . G . PASS END=69664620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 69664673 . C . PASS END=69664673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 69664688 . T . PASS END=69664688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 69664699 . A . PASS END=69664699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 69664729 . C . PASS END=69664729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 69664733 . G . PASS END=69664733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 69664751 . A . PASS END=69664751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 69664754 . C . PASS END=69664754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 69692557 . C . PASS END=69692562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 69692563 . T . PASS END=69692563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:14,0 chr2 69692564 . T . PASS END=69692588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:17,0 chr2 69692589 . G . PASS END=69692591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 69692592 . C . PASS END=69692616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr2 69692617 . C . PASS END=69692618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 69692619 . G . PASS END=69692626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 69692627 . G . PASS END=69692638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 69692639 . A . PASS END=69692644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 69692645 . G . PASS END=69692645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 69692646 . T . PASS END=69692646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 69692647 . G . PASS END=69692649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 69692650 . A . PASS END=69692653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 69692654 . A . PASS END=69692655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 69692656 . A . PASS END=69692657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 69692658 . A . PASS END=69692665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:25,0 chr2 69692666 . A . PASS END=69692689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:28,0 chr2 69692690 . A . PASS END=69692692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr2 69692693 . A . PASS END=69692693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 69692694 . T . PASS END=69692694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 69692695 . T . PASS END=69692782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1041:0,81,255:39,0 chr2 69692783 . A . PASS END=69692783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:31,0 chr2 69692784 . A . PASS END=69692842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:29:0,80,1125:0,80,255:37,0 chr2 69692843 . C . PASS END=69692843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 69692844 . T . PASS END=69692844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 69692845 . G . PASS END=69692855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1108:0,74,255:26,0 chr2 69692856 . G . PASS END=69692856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 69692857 . A . PASS END=69692857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 69692858 . C . PASS END=69692861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 69692862 . C . PASS END=69692862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr2 69692863 . A . PASS END=69692865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 69692866 . T . PASS END=69692866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 69692867 . T . PASS END=69692873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 69692874 . A . PASS END=69692919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,68,255:26,0 chr2 69692920 . A . PASS END=69692920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 69692921 . G . PASS END=69692933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 69692934 . G . PASS END=69692945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr2 69692946 . G . PASS END=69692955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:23,0 chr2 69692956 . A . PASS END=69692956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 69692957 . G . PASS END=69692968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 69692969 . T . PASS END=69692969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 69692970 . G . PASS END=69692972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 69692973 . C . PASS END=69692973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 69692974 . T . PASS END=69692976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 69692977 . G . PASS END=69692982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,668:0,43,255:18,0 chr2 69692983 . G . PASS END=69692985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 69692986 . G . PASS END=69693001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 69693002 . C . PASS END=69693002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 69693003 . G . PASS END=69693005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 69693006 . C T, 49.89 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=2.817;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,9,0:0.474,0.000:19:4,1,0:6,8,0:48:85,0,50,321,342,662:255,0,255:9,0:4.9887e+01,6.6269e-05,5.3000e+01,3.2074e+02,3.7642e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,5,4:5,5,3,6 chr2 69693007 . C . PASS END=69693028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,668:0,54,255:19,0 chr2 69693029 . G . PASS END=69693035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 69693036 . T . PASS END=69693036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr2 69693037 . G . PASS END=69693043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,868:0,61,255:24,0 chr2 69693044 . C . PASS END=69693050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,969:0,65,255:26,0 chr2 69693051 . G . PASS END=69693057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 69693058 . C . PASS END=69693058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 69693059 . A . PASS END=69693072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr2 69693073 . G . PASS END=69693113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,878:0,75,255:26,0 chr2 69693114 . T . PASS END=69693114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 69693115 . G . PASS END=69693155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,795:0,61,255:25,0 chr2 69693156 . A . PASS END=69693156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:22,0 chr2 69693157 . A . PASS END=69693172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,919:0,68,255:24,0 chr2 69693173 . T . PASS END=69693173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 69693174 . T . PASS END=69693180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 69693181 . A . PASS END=69693213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,582:0,48,255:18,0 chr2 69693214 . A . PASS END=69693214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 69693215 . T . PASS END=69693220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:17,0 chr2 69693221 . A . PASS END=69693221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 69693222 . C . PASS END=69693222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 69693223 . C . PASS END=69693223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 69693224 . C . PASS END=69693251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:18,0 chr2 69693252 . A . PASS END=69693252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 69693253 . A . PASS END=69693259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,579:0,54,255:19,0 chr2 69693260 . G . PASS END=69693279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr2 69693280 . G . PASS END=69693280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 69693281 . G . PASS END=69693293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:22,0 chr2 69693294 . A . PASS END=69693298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,790:0,50,255:19,0 chr2 69693299 . T . PASS END=69693317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 69693318 . C . PASS END=69693318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:19,0 chr2 69693319 . A . PASS END=69693345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,793:0,66,255:24,0 chr2 69693346 . A . PASS END=69693346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 69693347 . G . PASS END=69693397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr2 69693398 . G . PASS END=69693398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 69693399 . G . PASS END=69693401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 69693402 . T . PASS END=69693402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr2 69693403 . G . PASS END=69693412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,734:0,69,255:23,0 chr2 69693413 . T . PASS END=69693413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr2 69693414 . C . PASS END=69693415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 69693416 . T . PASS END=69693416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 69693417 . C . PASS END=69693419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 69693420 . C . PASS END=69693420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 69693421 . T . PASS END=69693438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 69693439 . A . PASS END=69693439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 69693440 . G . PASS END=69693440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 69693441 . G . PASS END=69693445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 69693446 . G . PASS END=69693470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 69693471 . C . PASS END=69693471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:21,0 chr2 69693472 . T . PASS END=69693472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 69693473 . T . PASS END=69693475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 69693476 . A . PASS END=69693476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:21,0 chr2 69693477 . G . PASS END=69693488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 69693489 . C . PASS END=69693553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,599:0,40,255:19,0 chr2 69693554 . A . PASS END=69693556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 69693557 . T . PASS END=69693557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 69693558 . T . PASS END=69693570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 69693571 . T . PASS END=69693571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 69693572 . G . PASS END=69693575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 69693576 . C . PASS END=69693576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,746:0,30,255:20,0 chr2 69693577 . A . PASS END=69693588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr2 69693589 . G . PASS END=69693591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr2 69693592 . G . PASS END=69693592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 69693593 . T . PASS END=69693620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,582:0,47,255:17,0 chr2 69693621 . C . PASS END=69693621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 69693622 . C . PASS END=69693624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 69693625 . T . PASS END=69693625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 69693626 . G . PASS END=69693634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr2 69693635 . A . PASS END=69693635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 69693636 . A . PASS END=69693648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 69693649 . T . PASS END=69693666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 69693667 . G . PASS END=69693667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 69693668 . G . PASS END=69693678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 69693679 . G . PASS END=69693683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 69703001 . C . PASS END=69703095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,120,1800:0,135,255:40,0 chr2 69704012 . C . PASS END=69704025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,962:0,67,255:26,0 chr2 69704026 . G . PASS END=69704028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 69704029 . A . PASS END=69704030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 69704031 . C . PASS END=69704033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 69704034 . T . PASS END=69704034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 69704035 . A . PASS END=69704118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:30:0,84,1260:0,90,255:40,0 chr2 69704119 . G . PASS END=69704122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:24,0 chr2 69706083 . C . PASS END=69706193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,119,1643:0,119,255:40,0 chr2 69707992 . C . PASS END=69707993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 69707994 . G . PASS END=69707994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 69707995 . T . PASS END=69707995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:28,0 chr2 69707996 . G . PASS END=69707996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 69707997 . C . PASS END=69707997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 69707998 . G . PASS END=69707999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 69708000 . T . PASS END=69708000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:29,0 chr2 69708001 . T . PASS END=69708006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1111:0,93,255:31,0 chr2 69708007 . T . PASS END=69708007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 69708008 . C . PASS END=69708024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1156:0,93,255:32,0 chr2 69708025 . A . PASS END=69708025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:30,0 chr2 69708026 . T . PASS END=69708045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 69708046 . G . PASS END=69708069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 69708070 . T . PASS END=69708070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr2 69708071 . C . PASS END=69708078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 69708079 . C . PASS END=69708093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 69709718 . T . PASS END=69709718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 69709719 . T . PASS END=69709881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:29:0,87,1086:0,87,255:40,0 chr2 69709882 . T . PASS END=69709906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:41:0,91,1488:0,91,255:40,0 chr2 69709907 . A . PASS END=69709907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:33,0 chr2 69709908 . G . PASS END=69709918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:39:0,93,1395:0,96,255:36,0 chr2 69709919 . A G, 49.79 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=2.221;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:11,12,0:10,7,0:48:85,0,50,664,741,1405:255,0,255:17,0:4.9791e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,17,11,8:10,11,8,11 chr2 69709920 . G . PASS END=69709932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:31:0,83,1350:0,83,255:31,0 chr2 69709933 . C . PASS END=69709933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 69709934 . A . PASS END=69709934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 69709935 . A . PASS END=69709935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 69709936 . T . PASS END=69709941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 69709942 . T . PASS END=69709942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 69709943 . T . PASS END=69709943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 69709944 . T . PASS END=69709944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 69723117 . C . PASS END=69723188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1117:0,80,255:36,0 chr2 69723189 . T . PASS END=69723189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1247:0,75,255:30,0 chr2 69723190 . C . PASS END=69723193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 69723194 . C . PASS END=69723194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1178:0,69,255:30,0 chr2 69723195 . C . PASS END=69723200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:28,0 chr2 69723201 . T . PASS END=69723212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,986:0,70,255:28,0 chr2 69727429 . T . PASS END=69727433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,140,255:40,0 chr2 69732701 . C . PASS END=69732791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:91:37:0,91,1347:0,91,255:40,0 chr2 69732792 . C . PASS END=69732792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:35,0 chr2 69732793 . T . PASS END=69732805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:38:0,96,1440:0,114,255:38,0 chr2 69734553 . C . PASS END=69734705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:30:0,84,1148:0,90,255:40,0 chr2 69734706 . C . PASS END=69734710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:22,0 chr2 69736363 . T . PASS END=69736365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 69736366 . G . PASS END=69736382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 69736383 . C . PASS END=69736384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 69736385 . C . PASS END=69736393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 69736394 . C . PASS END=69736394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 69736395 . T . PASS END=69736406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,529:0,42,255:16,0 chr2 69736407 . C . PASS END=69736407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr2 69736408 . T . PASS END=69736408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 69736409 . G . PASS END=69736423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr2 69736424 . C . PASS END=69736424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 69736425 . A . PASS END=69736465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr2 69736466 . T . PASS END=69736466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:15,0 chr2 69736467 . A . PASS END=69736480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,665:0,41,255:17,0 chr2 69736481 . C . PASS END=69736481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 69736482 . A . PASS END=69736482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 69736483 . C . PASS END=69736483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 69736484 . G . PASS END=69736484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 69736485 . T . PASS END=69736485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,519:0,34,255:16,0 chr2 69736486 . T . PASS END=69736490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 69736491 . T . PASS END=69736491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:13,0 chr2 69736492 . T . PASS END=69736503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 69736504 . G . PASS END=69736504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 69736505 . G . PASS END=69736516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 69736517 . A . PASS END=69736517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,466:0,31,255:13,0 chr2 69736518 . T . PASS END=69736523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,545:0,48,255:16,0 chr2 69736524 . T . PASS END=69736524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr2 69736525 . T . PASS END=69736526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,521:0,48,255:16,0 chr2 69736527 . C . PASS END=69736528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 69736529 . G . PASS END=69736536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 69736537 . A . PASS END=69736537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr2 69736538 . C . PASS END=69736545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 69736546 . G . PASS END=69736552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,527:0,31,255:13,0 chr2 69736553 . T . PASS END=69736553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:10,0 chr2 69736554 . T . PASS END=69736571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,352:0,33,255:11,0 chr2 69736572 . T . PASS END=69736592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 69741603 . C . PASS END=69741605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 69741606 . T . PASS END=69741608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 69741609 . C T, 50.00 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=1.286;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,10,0:0.667,0.000:15:2,9,0:3,1,0:47:85,0,46,353,179,532:255,0,149:4,0:5.0000e+01,9.4226e-05,4.9311e+01,3.5291e+02,2.1360e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,7,3:3,2,8,2 chr2 69741610 . T . PASS END=69741642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr2 69741643 . G . PASS END=69741646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 69741647 . G . PASS END=69741667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr2 69741668 . C . PASS END=69741706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1096:0,84,255:34,0 chr2 69741707 . T . PASS END=69741720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:32:0,63,945:0,96,255:23,0 chr2 69741721 . T . PASS END=69741723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:33:0,57,855:0,99,255:19,0 chr2 69741724 . T . PASS END=69741725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:60:36:0,60,900:0,92,255:20,0 chr2 69741726 . C . PASS END=69741752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:45:34:0,45,675:0,92,255:19,0 chr2 69741753 . CTGT C, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.102;ReadPosRankSum=0.729;FractionInformativeReads=0.923;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,19,0:0.528,0.000:36:9,12,0:8,7,0:47:80,0,47,180,180,180:255,0,255:14,26:5.0000e+01,9.0343e-05,4.9662e+01,1.8477e+02,2.1477e+02,1.8778e+02:0.00,30.00,33.01,34.77,64.77,37.78:9,8,9,10:7,10,10,9 chr2 69741754 . T . LowGQ END=69741757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:20,27:47:0:39:0,0,0:255,0,255:32,26 chr2 69741758 . G . PASS END=69741761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 69741762 . T . PASS END=69741762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1189:0,34,255:33,1 chr2 69741763 . T . PASS END=69741765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:36:0,73,1292:0,73,255:34,1 chr2 69741766 . T . PASS END=69741779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:36:0,80,1272:0,80,255:36,0 chr2 69741780 . C . PASS END=69741780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1233:0,39,255:34,0 chr2 69741781 . T . PASS END=69741800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1320:0,95,255:37,0 chr2 69741801 . C T, 48.94 PASS DP=40;MQ=250.00;MQRankSum=5.369;ReadPosRankSum=-0.612;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,18,0:0.450,0.000:40:14,10,0:8,8,0:48:84,0,50,586,782,1367:255,0,255:21,0:4.8942e+01,7.7141e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,10,8:8,14,12,6 chr2 69741802 . T . PASS END=69741848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:40,0 chr2 69741849 . T . PASS END=69741853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 69741854 . T G, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,17,0:0,12,0:84:172,87,0,1124,87,1124:255,87,0:0,0:1.3428e+02,8.4282e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,18:0,0,15,14 chr2 69741855 . C . PASS END=69741869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,984:0,65,255:26,0 chr2 69741870 . T . PASS END=69741881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr2 69746086 . C . PASS END=69746095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:13,0 chr2 69746096 . T . PASS END=69746111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:19,0 chr2 69746112 . G . PASS END=69746121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 69746122 . G . PASS END=69746122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 69746123 . C . PASS END=69746139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:24,0 chr2 69746140 . T . PASS END=69746140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 69746141 . G . PASS END=69746147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 69746148 . G . PASS END=69746148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 69746149 . T . PASS END=69746206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,869:0,69,255:26,0 chr2 69746207 . G . PASS END=69746235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 69746236 . C . PASS END=69746243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,80,255:26,0 chr2 69746244 . A . PASS END=69746247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:27,0 chr2 69746248 . C . PASS END=69746248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr2 69746249 . G . PASS END=69746284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,900:0,61,255:26,0 chr2 69746285 . G . PASS END=69746286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 69746287 . C . PASS END=69746298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,813:0,66,255:22,0 chr2 69746299 . C . PASS END=69746299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr2 69746300 . A . PASS END=69746305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 69746306 . T . PASS END=69746324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,720:0,44,255:19,0 chr2 69746325 . G . PASS END=69746326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:35:17:0,35,596:0,35,255:16,0 chr2 69746327 . T . PASS END=69746339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,568:0,51,255:17,0 chr2 69746340 . C . PASS END=69746344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:12,0 chr2 69746345 . G . PASS END=69746345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 69746346 . C . PASS END=69746355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 69746356 . A . PASS END=69746356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,355:0,6,255:8,0 chr2 69746357 . G . PASS END=69746372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 69747966 . C . PASS END=69748120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:39:0,90,1350:0,117,255:40,0 chr2 69752165 . C . PASS END=69752241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1105:0,82,255:38,0 chr2 69752242 . G . PASS END=69752244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1063:0,74,255:26,0 chr2 69754348 . C . PASS END=69754451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:47:0,96,1440:0,140,255:40,0 chr2 69757140 . T . PASS END=69757272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:49:0,120,1800:0,139,255:40,0 chr2 69757757 . C . PASS END=69757838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:87:38:0,87,1305:0,97,255:40,0 chr2 69759173 . T . PASS END=69759278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:31:0,81,1215:0,93,255:40,0 chr2 69759279 . A . PASS END=69759280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 69759281 . A . PASS END=69759283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 69759284 . A . PASS END=69759286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 69759287 . T . PASS END=69759290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 69759291 . C . PASS END=69759294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:25,0 chr2 69769655 . C . PASS END=69769797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,114,1745:0,114,255:40,0 chr2 69771568 . C . PASS END=69771676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,121,255:40,0 chr2 69783992 . C . PASS END=69784110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,100,1682:0,100,255:40,0 chr2 69870010 . C . PASS END=69870044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1275:0,92,255:36,0 chr2 69870045 . C . PASS END=69870045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:35,0 chr2 69870046 . G . PASS END=69870106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,96,255:39,0 chr2 69870107 . T . PASS END=69870127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr2 69870128 . G . PASS END=69870137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,60,255:18,0 chr2 69870138 . C . PASS END=69870143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:18:0,33,495:0,38,255:12,0 chr2 69870144 . T . PASS END=69870144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:11,0 chr2 69870145 . C . PASS END=69870146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:12,0 chr2 69870147 . C . PASS END=69870147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:11,0 chr2 69870148 . G . PASS END=69870153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr2 69870154 . A . PASS END=69870155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 69870156 . T . LowGQ END=69870156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr2 69870157 . C . PASS END=69870157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 69870158 . G . PASS END=69870158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 69870159 . A . PASS END=69870164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,466:0,39,255:13,0 chr2 69870165 . T . PASS END=69870169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr2 69870170 . C . PASS END=69870172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:18:14:0,18,270:0,25,255:6,0 chr2 70008698 . A . PASS END=70008706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,161,255:40,0 chr2 70015186 . G . PASS END=70015273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,99,1482:0,114,255:40,0 chr2 70016872 . C . PASS END=70017058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:132,1:133:99:89:0,120,1800:0,249,255:40,0 chr2 70017433 . C . PASS END=70017568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,0:123:99:68:0,120,1800:0,204,255:40,0 chr2 70017812 . C . PASS END=70017912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,152,255:40,0 chr2 70019200 . C . PASS END=70019200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 70019201 . T . PASS END=70019201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 70019202 . C . PASS END=70019205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1093:0,90,255:36,0 chr2 70019206 . T . PASS END=70019206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:35,0 chr2 70019207 . C . PASS END=70019292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:36:0,84,1317:0,84,255:40,0 chr2 70020835 . C . PASS END=70020894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,1:119:99:111:0,120,1800:0,255,255:40,0 chr2 70021205 . C . PASS END=70021353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:139,0:139:99:101:0,120,1800:0,255,255:40,0 chr2 70023690 . C . PASS END=70023690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 70023691 . T . PASS END=70023691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 70023692 . A . PASS END=70023694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:24,0 chr2 70023695 . T . PASS END=70023696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 70023697 . T . PASS END=70023761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,862:0,69,255:26,0 chr2 70023762 . A . PASS END=70023763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 70023764 . C . PASS END=70023765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 70023766 . T . PASS END=70023778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr2 70023779 . T . PASS END=70023779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:18,0 chr2 70023780 . G . PASS END=70023804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,653:0,54,255:18,0 chr2 70023805 . A . PASS END=70023805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 70023806 . G . PASS END=70023824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 70023825 . G . PASS END=70023825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 70023826 . G . PASS END=70023828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 70023829 . G . PASS END=70023829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:13,0 chr2 70023830 . T . PASS END=70023831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 70023832 . G . PASS END=70023840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:13,0 chr2 70023841 . G . PASS END=70023841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 70023842 . G . PASS END=70023843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 70023844 . G . PASS END=70023859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 70023860 . A . PASS END=70023860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,486:0,29,255:12,0 chr2 70023861 . A . PASS END=70023862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 70023863 . C . PASS END=70023863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 70023864 . T . PASS END=70023867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 70023868 . G . PASS END=70023869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 70023870 . T . PASS END=70023871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 70023872 . C . PASS END=70023879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr2 70023880 . G . PASS END=70023880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 70023881 . G . PASS END=70023906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,566:0,48,255:17,0 chr2 70023907 . G . PASS END=70023910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 70023911 . T . PASS END=70023911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr2 70023912 . G . PASS END=70023912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:20,0 chr2 70023913 . G . PASS END=70023913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70023914 . G . PASS END=70023917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 70023918 . C . PASS END=70023939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,930:0,72,255:25,0 chr2 70023940 . T . PASS END=70023940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 70023941 . C . PASS END=70023941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 70023942 . C . PASS END=70023945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 70023946 . A . PASS END=70023946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 70023947 . A . PASS END=70023952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70023953 . G . PASS END=70023955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 70023956 . C . PASS END=70023962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 70023963 . C . PASS END=70023963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 70023964 . T . PASS END=70023967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 70023968 . G . PASS END=70023968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 70023969 . G . PASS END=70023976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr2 70023977 . T . PASS END=70023977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:28,0 chr2 70023978 . C . PASS END=70024275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:33:0,80,1133:0,80,255:40,0 chr2 70024276 . C . PASS END=70024290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:23:0,69,817:0,69,255:24,0 chr2 70024291 . C . PASS END=70024291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 70024292 . C . PASS END=70024298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 70024299 . A . PASS END=70024300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr2 70024301 . A . PASS END=70024301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 70024302 . T . PASS END=70024302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 70024303 . G . PASS END=70024303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70024304 . G . PASS END=70024316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 70025920 . C . PASS END=70026048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:41:0,90,1350:0,97,255:40,0 chr2 70031641 . C . PASS END=70031641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 70031642 . T . PASS END=70031643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 70031644 . C . PASS END=70031644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr2 70031645 . T . PASS END=70031648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1032:0,90,255:30,0 chr2 70031649 . T . PASS END=70031649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 70031650 . C . PASS END=70031704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:32,0 chr2 70031705 . C . PASS END=70031705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:27,0 chr2 70031706 . A . PASS END=70031708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 70031709 . A . PASS END=70031715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr2 70031716 . A . PASS END=70031716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:23,0 chr2 70031717 . G . PASS END=70031719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1086:0,77,255:25,0 chr2 70031720 . C . PASS END=70031720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 70031721 . C . PASS END=70031721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 70031722 . A . PASS END=70031722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr2 70031723 . G . PASS END=70031723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 70031724 . G . PASS END=70031724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:23,0 chr2 70031725 . A . PASS END=70031725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:22,0 chr2 70031726 . G . PASS END=70031729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:23,0 chr2 70031730 . A . PASS END=70031730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:22,0 chr2 70031731 . G . PASS END=70031733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:23,0 chr2 70031734 . C . PASS END=70031738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:24:0,54,810:0,55,255:18,0 chr2 70031739 . T . PASS END=70031739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:17,0 chr2 70031740 . A . PASS END=70031745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:18:0,54,653:0,54,255:18,0 chr2 70031746 . G . PASS END=70031746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr2 70031747 . C . PASS END=70031750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 70031751 . A . PASS END=70031751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 70031752 . T . PASS END=70031759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 70033517 . G . PASS END=70033524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr2 70033525 . A . PASS END=70033525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 70033526 . G . PASS END=70033527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr2 70033528 . C . PASS END=70033528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 70033529 . G . PASS END=70033531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:31,0 chr2 70033532 . C . PASS END=70033532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 70033533 . T . PASS END=70033606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1119:0,83,255:40,0 chr2 70033607 . C . PASS END=70033630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,887:0,62,255:26,0 chr2 70035038 . G . PASS END=70035049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,684:0,51,255:19,0 chr2 70035050 . G . PASS END=70035051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 70035052 . T . PASS END=70035052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 70035053 . G . PASS END=70035079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:24,0 chr2 70035080 . T . PASS END=70035080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 70035081 . C . PASS END=70035090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr2 70035091 . T . PASS END=70035091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 70035092 . G . PASS END=70035102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,870:0,75,255:25,0 chr2 70035103 . G . PASS END=70035103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 70035104 . C . PASS END=70035108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 70035109 . A . PASS END=70035109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr2 70035110 . A . PASS END=70035114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 70035115 . A . PASS END=70035115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 70035116 . A . PASS END=70035126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr2 70035127 . G . PASS END=70035136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr2 70037726 . A . PASS END=70037802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,105,255:40,0 chr2 70037803 . G . PASS END=70037816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 70037817 . C . PASS END=70037817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70037818 . T . PASS END=70037823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr2 70039785 . G . PASS END=70039841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,143,255:40,0 chr2 70043233 . G . PASS END=70043252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,839:0,69,255:26,0 chr2 70043253 . G . PASS END=70043263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1172:0,90,255:31,0 chr2 70043264 . G . PASS END=70043264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 70043265 . G . PASS END=70043299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1279:0,89,255:35,0 chr2 70043300 . C . PASS END=70043300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 70043301 . C . PASS END=70043319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 70043320 . T . PASS END=70043326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr2 70045731 . T . PASS END=70045826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,112,1410:0,112,255:40,0 chr2 70046412 . T . PASS END=70046470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,1:109:99:96:0,120,1800:0,236,255:40,0 chr2 70047831 . G . PASS END=70047831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 70047832 . G . PASS END=70047833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1133:0,93,255:31,0 chr2 70047834 . T . PASS END=70047834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 70047835 . T . PASS END=70047835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 70047836 . G . PASS END=70047836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 70047837 . G . PASS END=70047843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1082:0,80,255:37,0 chr2 70047844 . A . PASS END=70047844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr2 70047845 . T . PASS END=70047953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1175:0,86,255:40,0 chr2 70052588 . G . PASS END=70052647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,101,1738:0,101,255:40,0 chr2 70057025 . A . PASS END=70057029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 70057030 . A . PASS END=70057030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 70057031 . T . PASS END=70057043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 70057044 . G . PASS END=70057044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 70057045 . G . PASS END=70057046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 70057047 . T . PASS END=70057047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 70057048 . G . PASS END=70057067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr2 70057068 . C . PASS END=70057068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 70057069 . C . PASS END=70057069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 70057070 . C . PASS END=70057081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,714:0,51,255:19,0 chr2 70057082 . G . PASS END=70057106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 70057107 . C . PASS END=70057107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 70057108 . G . PASS END=70057130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:23,0 chr2 70057131 . A . PASS END=70057131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 70057132 . C . PASS END=70057151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 70057152 . T . PASS END=70057152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 70057153 . C . PASS END=70057191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,900:0,69,255:24,0 chr2 70057192 . C . PASS END=70057192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 70057193 . G . PASS END=70057204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,892:0,72,255:24,0 chr2 70057205 . T . PASS END=70057206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 70057207 . C . PASS END=70057208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 70057209 . G . PASS END=70057209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:20,0 chr2 70057210 . T . PASS END=70057225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,707:0,63,255:21,0 chr2 70057226 . A . PASS END=70057226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 70057227 . C . PASS END=70057230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 70057231 . C . PASS END=70057252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,637:0,41,255:18,0 chr2 70057253 . G . PASS END=70057253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 70057254 . A . PASS END=70057254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 70057255 . G . PASS END=70057255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 70057256 . C . PASS END=70057257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 70057258 . G . PASS END=70057258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 70057259 . C . PASS END=70057259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 70057260 . A . PASS END=70057261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 70057262 . C . PASS END=70057262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 70057263 . G . PASS END=70057264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 70057265 . C . PASS END=70057265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 70057266 . T . PASS END=70057266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 70057267 . C . PASS END=70057268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 70057269 . T . PASS END=70057269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 70057270 . C . PASS END=70057270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 70057271 . A . PASS END=70057272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 70057273 . C . PASS END=70057273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 70057274 . A . PASS END=70057275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:15,0 chr2 70057276 . C . PASS END=70057276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 70057277 . C . PASS END=70057281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 70057282 . A . PASS END=70057282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:10,0 chr2 70057283 . A . PASS END=70057284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 70064679 . G . PASS END=70064802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:70:0,120,1800:0,178,255:40,1 chr2 70066589 . T . PASS END=70066685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,149,255:40,0 chr2 70068074 . C . PASS END=70068171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:39:0,96,1451:0,96,255:40,0 chr2 70070248 . A . PASS END=70070393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:91:39:0,91,1440:0,91,255:40,0 chr2 70071263 . G . PASS END=70071328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:55:0,120,1800:0,148,255:40,0 chr2 70074675 . T . PASS END=70074759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:61:0,120,1800:0,145,255:40,0 chr2 70076784 . T . PASS END=70076874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:35:0,92,1278:0,92,255:40,0 chr2 70081955 . A . PASS END=70082083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:90:47:0,90,1350:0,126,255:40,0 chr2 70082084 . T . PASS END=70082084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1527:0,77,255:31,0 chr2 70082085 . A . PASS END=70082092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,105,255:33,0 chr2 70088410 . A . PASS END=70088479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,134,255:40,0 chr2 70092032 . G . PASS END=70092107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:73:0,120,1800:0,204,255:40,0 chr2 70096851 . T . PASS END=70096986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:83:31:0,83,1128:0,83,255:40,0 chr2 70096987 . T . PASS END=70096987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:29,0 chr2 70096988 . A . PASS END=70096996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1180:0,83,255:29,0 chr2 70098877 . A . PASS END=70098964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:69:0,120,1800:0,174,255:40,0 chr2 70106041 . G . PASS END=70106136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:48:0,120,1800:0,135,255:40,0 chr2 70121117 . A . PASS END=70121150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,95,255:35,0 chr2 70122226 . A . PASS END=70122338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1260:0,102,255:40,0 chr2 70122339 . C . PASS END=70122346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,87,255:23,0 chr2 70123568 . A . PASS END=70123680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:58:0,120,1800:0,141,255:40,0 chr2 70124509 . A . PASS END=70124588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:71:0,120,1800:0,200,255:40,0 chr2 70130313 . G . PASS END=70130377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:71:0,120,1800:0,194,255:40,0 chr2 70131386 . G . PASS END=70131514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:56:0,120,1800:0,151,255:40,2 chr2 70142463 . A . PASS END=70142489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:34,0 chr2 70142490 . C . PASS END=70142490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr2 70142491 . A . PASS END=70142509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1180:0,85,255:33,0 chr2 70142510 . C . PASS END=70142510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr2 70142511 . G . PASS END=70142513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:28,0 chr2 70142514 . T . PASS END=70142514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1058:0,57,255:27,0 chr2 70142515 . A . PASS END=70142518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 70142519 . G . PASS END=70142519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 70142520 . G . PASS END=70142522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 70142523 . C . PASS END=70142533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:25,0 chr2 70142534 . A . PASS END=70142535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr2 70143253 . A . PASS END=70143352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:50:0,120,1800:0,147,255:40,0 chr2 70148868 . A . PASS END=70148897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:65:0,120,1800:0,194,255:40,0 chr2 70162483 . A . PASS END=70162507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:40:0,92,1405:0,92,255:40,0 chr2 70162508 . G . PASS END=70162508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:40,0 chr2 70162509 . A . PASS END=70162597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:37:0,89,1373:0,89,255:40,0 chr2 70164151 . G . PASS END=70164180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,986:0,78,255:26,0 chr2 70164367 . A . PASS END=70164367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 70164368 . A . PASS END=70164368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:21,0 chr2 70164369 . A . PASS END=70164369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 70164370 . C . PASS END=70164370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 70164371 . T . PASS END=70164371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 70164372 . T . PASS END=70164372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 70164373 . G . PASS END=70164393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,923:0,62,255:26,0 chr2 70164394 . G . PASS END=70164395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 70164396 . T . PASS END=70164396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,842:0,64,255:26,0 chr2 70164397 . C . PASS END=70164397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 70164398 . A . PASS END=70164398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 70164399 . C . PASS END=70164403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,971:0,87,255:29,0 chr2 70164404 . T . PASS END=70164404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 70164405 . C . PASS END=70164425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1056:0,80,255:30,0 chr2 70164426 . G . PASS END=70164426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 70164427 . C . PASS END=70164458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:33,0 chr2 70164459 . C . PASS END=70164459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1063:0,41,255:26,0 chr2 70164460 . A . PASS END=70164461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1085:0,80,255:28,0 chr2 70164462 . T . PASS END=70164462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:25,0 chr2 70164463 . G . PASS END=70164463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 70164464 . A . PASS END=70164470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 70164471 . C . PASS END=70164471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr2 70164472 . C . PASS END=70164482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 70164483 . C . PASS END=70164483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 70164484 . A . PASS END=70164507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,906:0,62,255:26,0 chr2 70164508 . C . PASS END=70164508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr2 70164509 . G . PASS END=70164526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 70165229 . A . PASS END=70165229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 70165230 . A . PASS END=70165234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,695:0,60,255:21,0 chr2 70165235 . T . PASS END=70165235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 70165236 . C . PASS END=70165238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:22,0 chr2 70165239 . C . PASS END=70165240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr2 70165241 . T . PASS END=70165244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:23,0 chr2 70165245 . C . PASS END=70165245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,687:0,52,255:22,0 chr2 70165246 . G . PASS END=70165246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 70165247 . T . PASS END=70165247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr2 70165248 . G . PASS END=70165251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:26,0 chr2 70165252 . A . PASS END=70165252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70165253 . G . PASS END=70165253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr2 70165254 . C . PASS END=70165259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 70165260 . C . PASS END=70165261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 70165262 . A . PASS END=70165264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1060:0,93,255:31,0 chr2 70165265 . T . PASS END=70165266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr2 70165267 . A . PASS END=70165267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr2 70165268 . C . PASS END=70165269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:30,0 chr2 70165270 . G . PASS END=70165290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:31:0,85,1105:0,85,255:34,0 chr2 70165291 . A . PASS END=70165291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:32,0 chr2 70165292 . G . PASS END=70165330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1341:0,95,255:38,0 chr2 70165331 . G . PASS END=70165331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr2 70165332 . C . PASS END=70165353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,81,255:36,0 chr2 70165354 . T . PASS END=70165374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,886:0,64,255:26,0 chr2 70165375 . A . PASS END=70165376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70165377 . A . PASS END=70165378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 70165379 . A . PASS END=70165379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,860:0,48,255:24,0 chr2 70165380 . G . PASS END=70165393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,917:0,64,255:25,0 chr2 70165394 . A . PASS END=70165394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:21,0 chr2 70165395 . C . PASS END=70165396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr2 70165397 . A . PASS END=70165397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:20,0 chr2 70165398 . G . PASS END=70165407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr2 70165408 . G . PASS END=70165409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 70165410 . T . PASS END=70165410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:17,0 chr2 70165411 . C . PASS END=70165416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:17,0 chr2 70187789 . T . PASS END=70187791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 70187792 . G . PASS END=70187792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 70187793 . T . PASS END=70187793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:16,0 chr2 70187794 . G . PASS END=70187798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,590:0,51,255:17,0 chr2 70187799 . A . PASS END=70187799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 70187800 . G . PASS END=70187800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 70187801 . C . PASS END=70187801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 70187802 . T . PASS END=70187802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 70187803 . C . PASS END=70187803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 70187804 . C . PASS END=70187811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr2 70187812 . C . PASS END=70187812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 70187813 . T . PASS END=70187814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 70187815 . C . PASS END=70187826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr2 70187827 . G . PASS END=70187827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 70187828 . G . PASS END=70187852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,831:0,66,255:25,0 chr2 70187853 . A . PASS END=70187853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 70187854 . A . PASS END=70187854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,693:0,19,255:21,0 chr2 70187855 . C . PASS END=70187857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 70187858 . A . PASS END=70187860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,845:0,41,255:22,0 chr2 70187861 . T . PASS END=70187865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 70187866 . G . PASS END=70187878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,56,255:19,0 chr2 70187879 . A . PASS END=70187879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 70187880 . G . PASS END=70187886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 70187887 . G . PASS END=70187890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70187891 . A . PASS END=70187891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 70187892 . A . PASS END=70187892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:19,0 chr2 70187893 . A . PASS END=70187910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 70187911 . T . PASS END=70187911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 70187912 . G . PASS END=70187927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr2 70187928 . A . PASS END=70187929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 70187930 . G . PASS END=70187932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr2 70187933 . C . PASS END=70187966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 70187967 . C . PASS END=70187968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70187969 . A . PASS END=70187969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 70187970 . A . PASS END=70187973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 70187974 . T . PASS END=70187985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 70187986 . C . PASS END=70188001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 70188002 . T . PASS END=70188002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 70188003 . A . PASS END=70188007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70188008 . C . PASS END=70188008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 70188009 . T . PASS END=70188032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:23,0 chr2 70188033 . A . PASS END=70188033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 70188034 . G . PASS END=70188070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 70188071 . T . PASS END=70188071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr2 70188072 . T . PASS END=70188079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr2 70188080 . A . PASS END=70188081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70188082 . T . PASS END=70188082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 70188083 . G . PASS END=70188083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70188084 . G . PASS END=70188087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 70188088 . C . PASS END=70188093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 70188094 . C . PASS END=70188117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,877:0,64,255:26,0 chr2 70188118 . T . PASS END=70188118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr2 70188119 . G . PASS END=70188167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr2 70188168 . G . PASS END=70188168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 70188169 . A . PASS END=70188169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1017:0,59,255:27,0 chr2 70188170 . G . PASS END=70188173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 70188174 . T . PASS END=70188174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 70188175 . G . PASS END=70188190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1194:0,83,255:34,0 chr2 70188191 . C . PASS END=70188191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:32,0 chr2 70188192 . A . PASS END=70188214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1101:0,80,255:33,0 chr2 70188215 . A . PASS END=70188216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 70188217 . T . PASS END=70188218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 70188219 . T . PASS END=70188220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr2 70188221 . C . PASS END=70188246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1127:0,83,255:33,0 chr2 70188247 . T . PASS END=70188247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:31,0 chr2 70188248 . G . PASS END=70188256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1271:0,89,255:34,0 chr2 70188257 . A . PASS END=70188257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:30,0 chr2 70188258 . A . PASS END=70188264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1271:0,89,255:33,0 chr2 70188265 . T . PASS END=70188265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:31,0 chr2 70188266 . C . PASS END=70188279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1165:0,102,255:34,0 chr2 70188280 . G . PASS END=70188280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 70188281 . G . PASS END=70188320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1264:0,92,255:35,0 chr2 70188321 . G . PASS END=70188321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:32,0 chr2 70188322 . C . PASS END=70188497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1160:0,88,255:40,0 chr2 70188498 . C . PASS END=70188498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:32,0 chr2 70188499 . C . PASS END=70188499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr2 70188500 . A . PASS END=70188536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,92,255:36,0 chr2 70188537 . C . PASS END=70188545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:25,0 chr2 70188546 . C . PASS END=70188554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 70188555 . C . PASS END=70188555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 70188556 . C . PASS END=70188591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:32,0 chr2 70188592 . C . PASS END=70188592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 70188593 . A . PASS END=70188627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1180:0,83,255:36,0 chr2 70188628 . G . PASS END=70188628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:36,0 chr2 70188629 . C . PASS END=70188638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1311:0,95,255:35,0 chr2 70188639 . G . PASS END=70188639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1324:0,59,255:31,0 chr2 70188640 . C . PASS END=70188662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1241:0,89,255:35,0 chr2 70188663 . T . PASS END=70188663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1148:0,64,255:32,0 chr2 70188664 . C . PASS END=70188675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:37,0 chr2 70188676 . T C, 48.61 PASS DP=39;MQ=250.00;MQRankSum=5.282;ReadPosRankSum=2.422;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,17,0:0.436,0.000:39:10,7,0:12,10,0:47:83,0,50,608,779,1387:255,0,255:19,0:4.8607e+01,8.1542e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,6,11:16,6,12,5 chr2 70188677 . G . PASS END=70188700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,94,255:34,0 chr2 70188701 . C . PASS END=70188701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:27,0 chr2 70188702 . A . PASS END=70188713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:30,0 chr2 70188714 . G . PASS END=70188715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 70188716 . A . PASS END=70188716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 70188717 . G . PASS END=70188734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 70188735 . A . PASS END=70188735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:25,0 chr2 70188736 . C . PASS END=70188741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 70188742 . G . PASS END=70188742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 70188743 . G . PASS END=70188756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 70188757 . G . PASS END=70188791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,731:0,63,255:26,0 chr2 70188792 . A . PASS END=70188797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 70188798 . A . PASS END=70188799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70188800 . G . PASS END=70188820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:40:19:0,40,635:0,40,255:19,0 chr2 70314876 . A . PASS END=70314877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr2 70314878 . G . PASS END=70314887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:24,0 chr2 70314888 . G . PASS END=70314888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 70314889 . T . PASS END=70314889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 70314890 . G . PASS END=70314891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 70314892 . C . PASS END=70314892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 70314893 . T . PASS END=70314897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,996:0,84,255:28,0 chr2 70314898 . G . PASS END=70314898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 70314899 . T . PASS END=70314900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr2 70314901 . G . PASS END=70314901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 70314902 . A . PASS END=70314903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr2 70314904 . T . PASS END=70314904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 70314905 . A . PASS END=70314906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1133:0,82,255:32,0 chr2 70314907 . A . PASS END=70314907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1090:0,60,255:32,0 chr2 70314908 . T . PASS END=70314912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1103:0,82,255:34,0 chr2 70314913 . C . PASS END=70314913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr2 70314914 . T . PASS END=70314918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1182:0,88,255:35,0 chr2 70314919 . C . PASS END=70314919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr2 70314920 . C . PASS END=70315010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:30:0,83,1216:0,83,255:37,0 chr2 70315011 . C . PASS END=70315031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,945:0,69,255:24,0 chr2 70315032 . A . PASS END=70315032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:20,0 chr2 70315033 . A . PASS END=70315043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr2 70315044 . A . PASS END=70315044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:22,0 chr2 70315045 . G . PASS END=70315046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 70315047 . A . PASS END=70315047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:21,0 chr2 70315048 . T . PASS END=70315056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 70315057 . T . PASS END=70315085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,684:0,53,255:21,0 chr2 70315086 . G . PASS END=70315086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:16,0 chr2 70315087 . C . PASS END=70315088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:17,0 chr2 70315089 . T . PASS END=70315089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 70315090 . T . PASS END=70315111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr2 70315112 . G . PASS END=70315112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 70315113 . G . PASS END=70315116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 70315117 . A . PASS END=70315118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 70315119 . G . PASS END=70315142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr2 70315143 . A . PASS END=70315143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,527:0,7,255:15,0 chr2 70315144 . G . PASS END=70315144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 70315145 . T . PASS END=70315148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,529:0,34,255:16,0 chr2 70315149 . G . PASS END=70315158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 70315159 . G . PASS END=70315170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:35:14:0,35,585:0,35,255:13,0 chr2 70315171 . C . PASS END=70315174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr2 70315175 . G . PASS END=70315175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 70315176 . A . PASS END=70315176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 70315177 . G . PASS END=70315177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 70315178 . G . PASS END=70315180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 70315181 . G . PASS END=70315181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 70315182 . G . PASS END=70315186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:18,0 chr2 70315187 . G . PASS END=70315187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr2 70315188 . C . PASS END=70315193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,623:0,54,255:18,0 chr2 70315194 . A . PASS END=70315198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70315199 . G . PASS END=70315236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,591:0,47,255:19,0 chr2 70315237 . A . PASS END=70315237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 70315238 . A . PASS END=70315246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,585:0,41,255:19,0 chr2 70315247 . C . PASS END=70315248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 70315249 . A . PASS END=70315254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 70315255 . C . PASS END=70315255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr2 70315256 . G . PASS END=70315256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 70315257 . G . PASS END=70315257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr2 70315258 . G . PASS END=70315264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 70315265 . G . PASS END=70315292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,931:0,62,255:25,0 chr2 70315293 . A . PASS END=70315293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 70315294 . A . PASS END=70315298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 70315299 . A . PASS END=70315299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 70315300 . C . PASS END=70315351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,815:0,65,255:26,0 chr2 70315352 . C . PASS END=70315352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 70315353 . A . PASS END=70315371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr2 70315372 . T . PASS END=70315390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,729:0,57,255:19,0 chr2 70315391 . G . PASS END=70315398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr2 70315399 . A . PASS END=70315399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 70315400 . A . PASS END=70315403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70315404 . A . PASS END=70315406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,676:0,46,255:19,0 chr2 70315407 . G . PASS END=70315411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 70315412 . G . PASS END=70315416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,684:0,46,255:18,0 chr2 70315417 . T . PASS END=70315417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70315418 . T . PASS END=70315420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 70315421 . G . PASS END=70315441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 70315442 . C . PASS END=70315443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 70315444 . C . PASS END=70315445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70315446 . C . PASS END=70315487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:16:0,43,668:0,43,255:19,0 chr2 70315488 . G . PASS END=70315489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 70315490 . G . PASS END=70315529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,507:0,43,255:18,0 chr2 70315530 . C . PASS END=70315532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70315533 . G . PASS END=70315534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 70315535 . T . PASS END=70315543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 70315544 . G . PASS END=70315544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 70315545 . A . PASS END=70315548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70315549 . A . PASS END=70315560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 70315561 . C . PASS END=70315565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70315566 . T . PASS END=70315566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:20,0 chr2 70315567 . C . PASS END=70315574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 70315575 . G . PASS END=70315577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,823:0,53,255:22,0 chr2 70315578 . C . PASS END=70315578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 70315579 . T . PASS END=70315579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 70315580 . G . PASS END=70315588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:25,0 chr2 70315589 . G . PASS END=70315590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70315591 . A . PASS END=70315591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 70315592 . C . PASS END=70315598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 70315599 . G . PASS END=70315601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 70315602 . A . PASS END=70315603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70315604 . A . PASS END=70315607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 70315608 . C . PASS END=70315611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 70315612 . C . PASS END=70315613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 70315614 . C . PASS END=70315616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1131:0,80,255:32,0 chr2 70315617 . T . PASS END=70315617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1001:0,41,255:30,0 chr2 70315618 . T . PASS END=70315624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1135:0,83,255:35,0 chr2 70315625 . G . PASS END=70315626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1216:0,72,255:34,0 chr2 70315627 . T . PASS END=70315700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1225:0,86,255:36,0 chr2 70315701 . G . PASS END=70315701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 70315702 . C . PASS END=70315713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,876:0,80,255:29,0 chr2 70315714 . C . PASS END=70315730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:26,0 chr2 70315731 . A . PASS END=70315739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 70315740 . A . PASS END=70315740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr2 70315741 . A . PASS END=70315750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 70315751 . C . PASS END=70315776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 70315777 . A . PASS END=70315777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,872:0,47,255:23,0 chr2 70315778 . C . PASS END=70315782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr2 70315783 . A . PASS END=70315784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,764:0,45,255:24,0 chr2 70315785 . G . PASS END=70315799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,881:0,61,255:26,0 chr2 70315800 . T . PASS END=70315825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1194:0,86,255:32,0 chr2 70315826 . C . PASS END=70315826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1168:0,69,255:28,0 chr2 70315827 . C . PASS END=70315938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:36,0 chr2 70315939 . G . PASS END=70315946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,68,255:23,0 chr2 70377488 . T . PASS END=70377495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 70377496 . A . PASS END=70377498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 70377499 . T . PASS END=70377499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 70377500 . A . PASS END=70377505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr2 70377506 . G . PASS END=70377507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1015:0,84,255:28,0 chr2 70377508 . T . PASS END=70377508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 70377509 . C . PASS END=70377517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr2 70377518 . C . PASS END=70377518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:28,0 chr2 70377519 . A . PASS END=70377557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1083:0,88,255:35,0 chr2 70377558 . T . PASS END=70377558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:34,0 chr2 70377559 . A . PASS END=70377632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1264:0,92,255:38,0 chr2 70377633 . A . PASS END=70377637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1080:0,69,255:25,0 chr2 70377638 . A . PASS END=70377645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1133:0,82,255:29,0 chr2 70377646 . T . PASS END=70377646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 70377647 . C . PASS END=70377653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 70377654 . A . PASS END=70377654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 70377655 . T . PASS END=70377661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:28,0 chr2 70377662 . A . PASS END=70377670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,76,255:25,0 chr2 70377671 . C . PASS END=70377677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,62,255:19,0 chr2 70377678 . T . PASS END=70377681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 70377682 . C . PASS END=70377686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:17,0 chr2 70377687 . G . PASS END=70377687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:17,0 chr2 70377688 . A . PASS END=70377692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 70377693 . T . PASS END=70377693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr2 70377694 . T . PASS END=70377696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 70387757 . C . PASS END=70387911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:33:0,93,1249:0,93,255:40,0 chr2 70387912 . A . PASS END=70387912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:31,0 chr2 70387913 . A . PASS END=70387919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:32,0 chr2 70392224 . C . PASS END=70392324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,100,1350:0,100,255:40,0 chr2 70392660 . C . PASS END=70392694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:92:45:0,92,1520:0,92,255:40,0 chr2 70392695 . C . PASS END=70392695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:73:54:0,73,1506:0,73,255:40,0 chr2 70392696 . C . PASS END=70392706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:54:0,84,1566:0,84,255:40,0 chr2 70392707 . C . PASS END=70392707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:48:55:0,48,1440:0,48,255:40,0 chr2 70392708 . T . PASS END=70392729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,109,1701:0,109,255:40,0 chr2 70392730 . T . PASS END=70392730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:45:50:0,45,1511:0,45,255:40,0 chr2 70392731 . G . PASS END=70392738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,117,1632:0,117,255:40,0 chr2 70392739 . A . PASS END=70392739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:47:49:0,47,1501:0,47,255:40,0 chr2 70392740 . A . PASS END=70392767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:41:0,94,1281:0,94,255:40,0 chr2 70396689 . C . PASS END=70396696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:35:0,91,1117:0,91,255:36,0 chr2 70396697 . T . PASS END=70396697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:34,0 chr2 70396698 . G . PASS END=70396784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1260:0,96,255:40,0 chr2 70396785 . G . PASS END=70396793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,87,255:23,0 chr2 70402805 . C . PASS END=70402909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:39:0,93,1395:0,117,255:40,0 chr2 70406664 . C . PASS END=70406774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:55:0,120,1800:0,149,255:40,0 chr2 70408295 . C . PASS END=70408303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 70408304 . C . PASS END=70408304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 70408305 . A . PASS END=70408313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr2 70408314 . G . PASS END=70408314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 70408315 . A . PASS END=70408325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:17,0 chr2 70408326 . T . PASS END=70408331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr2 70408332 . A . PASS END=70408332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 70408333 . G . PASS END=70408335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 70408336 . A . PASS END=70408336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 70408337 . G . PASS END=70408338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 70408339 . G . PASS END=70408354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:30,0 chr2 70408355 . A . PASS END=70408355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,908:0,76,255:29,0 chr2 70408356 . G . PASS END=70408473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:32:0,83,1194:0,83,255:39,0 chr2 70408474 . T . PASS END=70408474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:32,0 chr2 70408475 . T . PASS END=70408485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1379:0,95,255:34,0 chr2 70408486 . T . PASS END=70408486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr2 70408487 . T . PASS END=70408522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1213:0,88,255:35,0 chr2 70408523 . G . PASS END=70408523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr2 70408524 . C . PASS END=70408538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1319:0,84,255:35,0 chr2 70408539 . G . PASS END=70408539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:31,0 chr2 70408540 . C . PASS END=70408544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:33,0 chr2 70408545 . C . PASS END=70408545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:31,0 chr2 70408546 . A . PASS END=70408587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,89,255:34,0 chr2 70408588 . G . PASS END=70408588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:28,0 chr2 70408589 . T . PASS END=70408602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 70408603 . A . PASS END=70408608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1124:0,77,255:26,0 chr2 70408609 . C . PASS END=70408639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:30,0 chr2 70408640 . G . PASS END=70408640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr2 70408641 . C . PASS END=70408644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 70408645 . G . PASS END=70408647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 70408648 . T . PASS END=70408648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 70408649 . T . PASS END=70408659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:26,0 chr2 70408660 . C . PASS END=70408661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr2 70408662 . C . PASS END=70408664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 70408665 . C . PASS END=70408683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr2 70408684 . T . PASS END=70408684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:18,0 chr2 70408685 . C . PASS END=70408699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:22,0 chr2 70408700 . C . PASS END=70408700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr2 70408701 . C . PASS END=70408704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 70408705 . A . PASS END=70408705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 70408706 . G . PASS END=70408709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 70408710 . G . PASS END=70408710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:21,0 chr2 70408711 . A . PASS END=70408713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 70408714 . T . PASS END=70408714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 70408715 . G . PASS END=70408720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:23,0 chr2 70408721 . A . PASS END=70408721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 70408722 . C . PASS END=70408725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,825:0,69,255:24,0 chr2 70408726 . T . PASS END=70408727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 70408728 . T . PASS END=70408762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,785:0,69,255:24,0 chr2 70408763 . A . PASS END=70408763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,817:0,44,255:23,0 chr2 70408764 . G . PASS END=70408768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:26,0 chr2 70408769 . C . PASS END=70408770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 70408771 . T . PASS END=70408771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr2 70408772 . A . PASS END=70408774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 70408775 . A . PASS END=70408804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,893:0,61,255:26,0 chr2 70408805 . T . PASS END=70408805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 70408806 . C . PASS END=70408809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1070:0,84,255:30,0 chr2 70408810 . T . PASS END=70408810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 70408811 . C . PASS END=70408828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:31,0 chr2 70408829 . T . PASS END=70408835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 70408836 . A . PASS END=70408850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr2 70408851 . A . PASS END=70408851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr2 70408852 . A . PASS END=70408852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 70408853 . A . PASS END=70408855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr2 70408856 . A . PASS END=70408860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 70408861 . T . PASS END=70408861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 70408862 . A . PASS END=70408862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 70408863 . A . PASS END=70408863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 70408864 . T . PASS END=70408865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 70408866 . A . PASS END=70408866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr2 70408867 . G . PASS END=70408875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 70408876 . T . PASS END=70408876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:27,0 chr2 70408877 . C . PASS END=70408877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 70408878 . T . PASS END=70408880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 70408881 . T . PASS END=70408887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 70408888 . A . PASS END=70408890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,87,255:23,0 chr2 70408891 . G . PASS END=70408909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:32,0 chr2 70408910 . A . PASS END=70408910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:30,0 chr2 70408911 . G . PASS END=70408992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1172:0,83,255:37,0 chr2 70408993 . C . PASS END=70408993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 70408994 . A . PASS END=70409014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 70409015 . T . PASS END=70409015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 70409016 . G . PASS END=70409016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 70409017 . T . PASS END=70409029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:25,0 chr2 70409030 . G . PASS END=70409071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:18,0 chr2 70409072 . C . PASS END=70409086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:13:0,36,472:0,39,255:13,0 chr2 70409087 . G . PASS END=70409087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 70409088 . G . PASS END=70409102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:9:0,24,327:0,27,255:9,0 chr2 70409103 . A . PASS END=70409103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 70409104 . G . PASS END=70409110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 70409111 . G . PASS END=70409115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr2 70409116 . A . PASS END=70409117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 70439851 . T . PASS END=70439855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 70439856 . G . PASS END=70439977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1035:0,84,255:40,0 chr2 70441481 . T . PASS END=70441612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:32:0,81,1215:0,96,255:40,0 chr2 70441613 . C . PASS END=70441626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:25,0 chr2 70442503 . C . PASS END=70442626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:81:36:0,81,1215:0,95,255:40,0 chr2 70443336 . C . PASS END=70443424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:54:0,120,1800:0,123,255:40,0 chr2 70443536 . C . PASS END=70443631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1800:0,147,255:40,0 chr2 70443956 . T . PASS END=70444125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:37:0,84,1260:0,95,255:40,0 chr2 70444126 . C . PASS END=70444126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1035:0,108,255:23,0 chr2 70444129 . G . PASS END=70444129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1035:0,92,255:23,0 chr2 70451644 . T . PASS END=70451859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:54:0,114,1710:0,129,255:40,0 chr2 70452489 . T . PASS END=70452525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,131,255:40,0 chr2 70454864 . T . PASS END=70454864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 70454867 . G . PASS END=70454954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:60:0,120,1800:0,159,255:40,0 chr2 70455476 . C . PASS END=70455594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:63:0,120,1800:0,171,255:40,0 chr2 70456191 . C . PASS END=70456191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1574:0,58,255:40,0 chr2 70456192 . T . PASS END=70456192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1604:0,102,255:40,0 chr2 70456193 . T . PASS END=70456193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1714:0,70,255:40,0 chr2 70456194 . G . PASS END=70456201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:98:49:0,98,1720:0,98,255:40,0 chr2 70456202 . T . PASS END=70456202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:71:53:0,71,1737:0,71,255:40,0 chr2 70456203 . G . PASS END=70456223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,143,255:40,0 chr2 70456390 . A . PASS END=70456390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 70456396 . T . PASS END=70456409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,200,255:40,0 chr2 70456410 . T . PASS END=70456450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,168,255:40,0 chr2 70456453 . A . LowGQ END=70456453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,13:70:0:70:0,0,1722:247,0,255:40,6 chr2 70457888 . C . PASS END=70457986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:41:0,107,1534:0,107,255:40,0 chr2 70463205 . C . PASS END=70463211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:62:0,120,1800:0,167,255:40,0 chr2 70463212 . T . PASS END=70463288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:66:0,120,1800:0,168,255:40,0 chr2 70463289 . G . PASS END=70463307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,153,255:40,0 chr2 70463313 . A . PASS END=70463313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,117,1755:0,134,255:38,0 chr2 70475537 . A . PASS END=70475562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,111,1315:0,114,255:40,0 chr2 70475565 . C . PASS END=70475565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 70485297 . A . PASS END=70485316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr2 70485317 . G . PASS END=70485320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:16,0 chr2 70485321 . G . PASS END=70485321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 70485322 . T . PASS END=70485339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,501:0,48,255:16,0 chr2 70485340 . T . PASS END=70485340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 70485341 . G . PASS END=70485345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr2 70485346 . T . PASS END=70485346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 70485347 . G . PASS END=70485349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,621:0,51,255:17,0 chr2 70485350 . G . PASS END=70485350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 70485351 . C . PASS END=70485360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 70485361 . G . PASS END=70485361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr2 70485362 . C . PASS END=70485363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 70485364 . G . PASS END=70485364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr2 70485365 . A . PASS END=70485366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 70485367 . G . PASS END=70485367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr2 70485368 . C . PASS END=70485377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr2 70485378 . G . PASS END=70485378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 70485379 . C . PASS END=70485381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 70485382 . A . PASS END=70485382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 70485383 . G . PASS END=70485386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 70485387 . C . PASS END=70485389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 70485390 . G . PASS END=70485393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 70485394 . C . PASS END=70485395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 70485396 . C . PASS END=70485396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 70485397 . C . PASS END=70485398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr2 70485399 . G . PASS END=70485399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:12,0 chr2 70485400 . A . PASS END=70485406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 70485407 . C . PASS END=70485407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 70485408 . G . PASS END=70485408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 70486492 . C . PASS END=70486492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 70486493 . G . PASS END=70486496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1143:0,85,255:33,0 chr2 70486497 . A . PASS END=70486497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:34,0 chr2 70486498 . T . PASS END=70486510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:95:35:0,95,1266:0,95,255:37,0 chr2 70486511 . T . PASS END=70486511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:35,0 chr2 70486512 . G . PASS END=70486643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:37:0,94,1312:0,94,255:40,0 chr2 70486644 . G . PASS END=70486644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1381:0,73,255:30,0 chr2 70486645 . G . PASS END=70486669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:32,0 chr2 70486670 . G . PASS END=70486698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,906:0,62,255:26,0 chr2 70488344 . G . PASS END=70488344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,859:0,31,255:23,0 chr2 70488345 . T . PASS END=70488497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:29:0,83,1186:0,83,255:40,0 chr2 70488498 . C . PASS END=70488513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,898:0,62,255:26,0 chr2 70488514 . A . PASS END=70488518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:47:26:0,47,810:0,47,255:19,0 chr2 70502091 . G . PASS END=70502106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr2 70502107 . T . PASS END=70502143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:30:0,86,1225:0,86,255:38,0 chr2 70502144 . T . PASS END=70502144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr2 70502145 . T . PASS END=70502154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1266:0,90,255:39,0 chr2 70502155 . G . PASS END=70502155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:51:43:0,51,1450:0,51,255:36,0 chr2 70502156 . G . PASS END=70502263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:38:0,87,1438:0,87,255:40,0 chr2 70502264 . T . PASS END=70502264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:33,0 chr2 70502265 . C . PASS END=70502298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,99,255:37,0 chr2 70502299 . G . PASS END=70502302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:25,0 chr2 70502646 . G . PASS END=70502656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:36,0 chr2 70502657 . C . PASS END=70502657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:32,0 chr2 70502658 . T . PASS END=70502798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:36:0,84,1344:0,84,255:40,0 chr2 70503866 . G . PASS END=70503869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:25,0 chr2 70503870 . T . PASS END=70503870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,764:0,36,255:24,0 chr2 70503871 . C . PASS END=70503873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr2 70503874 . A . PASS END=70503874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 70503875 . C . PASS END=70503878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 70503879 . G . PASS END=70503879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:26,0 chr2 70503880 . A . PASS END=70503880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 70503881 . T . PASS END=70503885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr2 70503886 . G . PASS END=70503886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:31,0 chr2 70503887 . A . PASS END=70504329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1184:0,83,255:40,0 chr2 70504330 . C . PASS END=70504331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr2 70504332 . G . PASS END=70504400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:36,0 chr2 70504401 . T . PASS END=70504435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,914:0,62,255:26,0 chr2 70504436 . C . PASS END=70504444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:27,0 chr2 70504445 . T . PASS END=70504448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 70504449 . C . PASS END=70504477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr2 70504478 . T . PASS END=70504508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,729:0,60,255:25,0 chr2 70504509 . T . PASS END=70504524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 70508766 . T . PASS END=70508816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1473:0,104,255:40,0 chr2 70514393 . T . PASS END=70514503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:81:0,120,1800:0,206,255:40,2 chr2 70515200 . C . PASS END=70515324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,120,1800:0,126,255:40,0 chr2 70516482 . A . PASS END=70516504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:121:0,120,1800:0,255,255:40,0 chr2 70520285 . A . PASS END=70520292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:104:0,120,1800:0,250,255:40,0 chr2 70520750 . T . PASS END=70520774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1382:0,81,255:38,0 chr2 70520775 . T . PASS END=70520775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:37,0 chr2 70520776 . G . PASS END=70520776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 70520777 . C . PASS END=70520780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:38:0,62,1267:0,62,255:35,0 chr2 70520781 . T . PASS END=70520781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,98,255:27,0 chr2 70524421 . T . PASS END=70524431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,621:0,51,255:17,0 chr2 70524432 . T . PASS END=70524432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 70524433 . T . PASS END=70524434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,751:0,47,255:20,0 chr2 70524435 . A . PASS END=70524444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr2 70524445 . C . PASS END=70524445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,685:0,39,255:21,0 chr2 70524446 . T . PASS END=70524450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr2 70524451 . C . PASS END=70524455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 70524456 . T . PASS END=70524456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 70524457 . C . PASS END=70524457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70524458 . T . PASS END=70524458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr2 70524459 . T . PASS END=70524463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 70524464 . A . PASS END=70524464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 70524465 . T . PASS END=70524465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1302:0,89,255:34,0 chr2 70524466 . A . PASS END=70524466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1143:0,58,255:33,0 chr2 70524467 . G . PASS END=70524539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,105,1368:0,111,255:40,0 chr2 70524540 . C . PASS END=70524576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,114,1798:0,114,255:40,0 chr2 70524577 . G A, 50.00 PASS DP=51;MQ=179.44;MQRankSum=-0.274;ReadPosRankSum=1.934;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,27,0:0.529,0.000:51:8,9,0:16,18,0:48:85,0,50,966,821,1787:255,0,255:23,0:5.0000e+01,6.7045e-05,5.2662e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,8,19:12,12,18,9 chr2 70524578 . T . PASS END=70524609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:36:0,87,1305:0,107,255:40,0 chr2 70527972 . C . PASS END=70528112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:33:0,81,1215:0,99,255:40,0 chr2 70528540 . T . PASS END=70528540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 70528541 . C . PASS END=70528542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 70528543 . G . PASS END=70528544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 70528545 . G . PASS END=70528545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 70528546 . A . PASS END=70528547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 70528548 . A . PASS END=70528548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 70528549 . G . PASS END=70528550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:17,0 chr2 70528551 . A . PASS END=70528551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 70528552 . G . PASS END=70528556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr2 70528557 . A . PASS END=70528557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr2 70528558 . C . PASS END=70528565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 70528566 . C . PASS END=70528584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr2 70528585 . T . PASS END=70528587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 70528588 . G . PASS END=70528603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,852:0,61,255:23,0 chr2 70528604 . A . PASS END=70528604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:20,0 chr2 70528605 . A . PASS END=70528610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 70528611 . C . PASS END=70528669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,532:0,41,255:19,0 chr2 70528670 . C . PASS END=70528678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr2 70528679 . C . PASS END=70528679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 70528680 . T . PASS END=70528683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 70528684 . C . PASS END=70528684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 70528685 . T . PASS END=70528691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr2 70528692 . T . PASS END=70528692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,421:0,11,255:13,0 chr2 70528693 . C . PASS END=70528693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 70528694 . T . PASS END=70528695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr2 70528696 . T . PASS END=70528697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 70528698 . A . PASS END=70528699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 70528700 . G . PASS END=70528701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 70528702 . T . PASS END=70528702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 70528703 . G . PASS END=70528709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 70528710 . C . PASS END=70528711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 70528712 . T . PASS END=70528712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 70528713 . C . PASS END=70528719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 70528720 . G . PASS END=70528725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 70528726 . G . PASS END=70528736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,535:0,31,255:13,0 chr2 70528737 . T . PASS END=70528738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,449:0,25,255:13,0 chr2 70528739 . C . PASS END=70528741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 70528742 . A . PASS END=70528742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr2 70528743 . A . PASS END=70528749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr2 70528750 . G . PASS END=70528752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 70528753 . T . PASS END=70528755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 70528756 . G . PASS END=70528756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr2 70528757 . A . PASS END=70528757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 70528758 . G . PASS END=70528758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr2 70528759 . G . PASS END=70528767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr2 70528768 . G . PASS END=70528769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70528770 . G . PASS END=70528770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 70528771 . G . PASS END=70528773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70528774 . C . PASS END=70528774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 70528775 . G . PASS END=70528775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 70528776 . A . LowGQ END=70528776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,659:6,0,255:19,0 chr2 70528777 . G . PASS END=70528778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr2 70528779 . G . PASS END=70528779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr2 70528780 . C . PASS END=70528780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 70528781 . C . PASS END=70528782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70528783 . G . PASS END=70528783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 70528784 . C . PASS END=70528784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr2 70528785 . C . PASS END=70528785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70528786 . A . PASS END=70528786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 70528787 . C . PASS END=70528787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 70528788 . C . PASS END=70528788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70528789 . A . PASS END=70528789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 70528790 . G . PASS END=70528792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70528793 . G . PASS END=70528793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 70528794 . C . PASS END=70528798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 70528799 . C . PASS END=70528799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 70528800 . A . PASS END=70528813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr2 70528814 . A . PASS END=70528816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:18,0 chr2 70528817 . C . PASS END=70528822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 70528823 . C . PASS END=70528826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr2 70528827 . G A, 48.92 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=1.883;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,9,0:0.429,0.000:21:5,3,0:7,6,0:47:84,0,50,293,426,719:255,0,255:10,0:4.8922e+01,7.7400e-05,5.3000e+01,2.9302e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,3,6,3:8,4,4,5 chr2 70528828 . G . PASS END=70528854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,643:0,40,255:19,0 chr2 70528855 . C . PASS END=70528855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 70528856 . G . PASS END=70528856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 70528857 . C . PASS END=70528858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 70528859 . C . PASS END=70528864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,676:0,46,255:19,0 chr2 70528865 . G . PASS END=70528887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr2 70528888 . C . PASS END=70528888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70528889 . G . PASS END=70528889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:18,0 chr2 70528890 . C . PASS END=70528895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70528896 . C . PASS END=70528896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 70528897 . T . PASS END=70528900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 70528901 . G . PASS END=70528915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:19,0 chr2 70528916 . G . PASS END=70528926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 70528927 . G . PASS END=70528928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 70528929 . C . PASS END=70528938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 70528939 . G . PASS END=70528942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70528943 . A . PASS END=70528944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 70528945 . A . PASS END=70529075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1033:0,84,255:38,0 chr2 70529076 . T . PASS END=70529076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:29,0 chr2 70529077 . C . PASS END=70529092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1225:0,86,255:33,0 chr2 70529093 . C . PASS END=70529093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:25,0 chr2 70529094 . A . PASS END=70529099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,86,255:28,0 chr2 70529100 . G . PASS END=70529124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,900:0,61,255:25,0 chr2 70529125 . G . PASS END=70529125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 70529126 . C . PASS END=70529126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 70529127 . T . PASS END=70529127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 70529128 . G . PASS END=70529128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 70529129 . C . PASS END=70529129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:19,0 chr2 70529130 . T . PASS END=70529130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 70529131 . G . PASS END=70529143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr2 70676737 . T . PASS END=70676753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:62:0,111,1665:0,153,255:40,0 chr2 70677991 . T . PASS END=70677993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 70677994 . G A, 46.90 PASS DP=37;MQ=250.00;MQRankSum=5.089;ReadPosRankSum=3.882;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,15,0:0.405,0.000:37:10,12,0:12,3,0:46:82,0,50,508,779,1286:255,0,255:19,0:4.6905e+01,1.1028e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,8,7:13,9,9,6 chr2 70677995 . A . PASS END=70677998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1213:0,94,255:33,0 chr2 70678879 . T . PASS END=70678892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,119,1681:0,119,255:40,0 chr2 70680350 . C . PASS END=70680378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:19,0 chr2 70680379 . C . PASS END=70680384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 70680385 . A . PASS END=70680390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr2 70680391 . G . PASS END=70680394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 70680395 . T . PASS END=70680397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 70680398 . G . PASS END=70680399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 70680400 . T . PASS END=70680400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 70680401 . T . PASS END=70680404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 70680405 . G . PASS END=70680405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 70680406 . T . PASS END=70680425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,853:0,69,255:23,0 chr2 70680426 . G . PASS END=70680446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,592:0,40,255:19,0 chr2 70680447 . G . PASS END=70680447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 70680448 . A . PASS END=70680448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 70680449 . C . PASS END=70680459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 70683471 . T . PASS END=70683472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1149:0,93,255:33,0 chr2 70683473 . T . PASS END=70683473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1049:0,52,255:31,0 chr2 70683474 . A . PASS END=70683478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:36,0 chr2 70683479 . C . PASS END=70683479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 70683480 . A . PASS END=70683581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:37:0,94,1296:0,94,255:40,0 chr2 70683582 . G . PASS END=70683582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr2 70683583 . C . PASS END=70683596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,89,255:36,0 chr2 70683597 . G . PASS END=70683616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:22:0,60,900:0,66,255:26,0 chr2 70683617 . G . PASS END=70683620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 70692748 . A . PASS END=70692748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 70692749 . C . PASS END=70692758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1116:0,84,255:29,0 chr2 70692759 . C . PASS END=70692759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 70692760 . T . PASS END=70692760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 70692761 . T . PASS END=70692761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 70692762 . G . PASS END=70692770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:31,0 chr2 70692771 . C . PASS END=70692771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 70692772 . A . PASS END=70692775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 70692776 . A . PASS END=70692776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 70692777 . A . PASS END=70692777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1024:0,38,255:28,0 chr2 70692778 . A . PASS END=70692839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1035:0,80,255:33,0 chr2 70692840 . C . PASS END=70692852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr2 70692853 . G . PASS END=70692855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 70692856 . A . PASS END=70692867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,978:0,67,255:25,0 chr2 70692868 . G . PASS END=70692868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 70741991 . C . PASS END=70741994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 70741995 . C . PASS END=70742002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr2 70742003 . A . PASS END=70742003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 70742004 . C . PASS END=70742008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 70742009 . T . PASS END=70742044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr2 70780316 . C . PASS END=70780319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 70780320 . A . PASS END=70780320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 70780321 . A . PASS END=70780353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1061:0,83,255:32,0 chr2 70780354 . C . PASS END=70780372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr2 70780373 . T . PASS END=70780373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,901:0,50,255:25,0 chr2 70780860 . C . PASS END=70780899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:37:0,97,1228:0,97,255:37,0 chr2 70890557 . T . PASS END=70890852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:32:0,86,1233:0,86,255:40,0 chr2 70890853 . T . PASS END=70890867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr2 70900010 . C . PASS END=70900027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:26,0 chr2 70900028 . G . PASS END=70900030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr2 70900031 . A . PASS END=70900031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,907:0,67,255:27,0 chr2 70900032 . G . PASS END=70900032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 70900033 . A . PASS END=70900033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:28,0 chr2 70900034 . C . PASS END=70900038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1070:0,90,255:30,0 chr2 70900039 . G . PASS END=70900039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 70900040 . G . PASS END=70900044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 70900045 . T . PASS END=70900045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr2 70900046 . T . PASS END=70900085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:31:0,82,1133:0,82,255:37,0 chr2 70900086 . A . PASS END=70900086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:33,0 chr2 70900087 . G . PASS END=70900128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1126:0,85,255:32,0 chr2 70900129 . T . PASS END=70900129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:27,0 chr2 70900130 . C . PASS END=70900138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr2 70900373 . C . PASS END=70900379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1304:0,84,255:38,0 chr2 70900380 . T . PASS END=70900380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr2 70900381 . T . PASS END=70900457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1202:0,83,255:40,0 chr2 70900458 . T . PASS END=70900458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr2 70901810 . C . PASS END=70901826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:29,0 chr2 70901827 . T . PASS END=70901827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr2 70901828 . T . PASS END=70901919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:30:0,86,1103:0,86,255:40,0 chr2 70901920 . T . PASS END=70901920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:31,0 chr2 70901921 . C . PASS END=70901931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 70901932 . T . PASS END=70901957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,953:0,62,255:25,0 chr2 70903841 . T . PASS END=70903866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,599:0,48,255:19,0 chr2 70903867 . G . PASS END=70903907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,618:0,60,255:22,0 chr2 70903908 . A . PASS END=70903908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 70903909 . G . PASS END=70903912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 70903913 . C . PASS END=70903913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:22,0 chr2 70903914 . A . PASS END=70903918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:25,0 chr2 70903919 . C . PASS END=70903919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 70903920 . T . PASS END=70903920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 70903921 . G . PASS END=70903968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:32,0 chr2 70903969 . G . PASS END=70904017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,750:0,61,255:26,0 chr2 70904890 . C . PASS END=70905009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:46:0,119,1800:0,119,255:40,0 chr2 70905836 . C . PASS END=70905836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 70905837 . G . PASS END=70905838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 70905839 . G . LowGQ END=70905839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr2 70905840 . G . PASS END=70905865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:18,0 chr2 70905866 . C . PASS END=70905873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr2 70905874 . C . PASS END=70905888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 70905889 . T . PASS END=70905889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 70905890 . G . PASS END=70905902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr2 70905903 . G . PASS END=70905910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1164:0,90,255:31,0 chr2 70905911 . C . PASS END=70905911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 70905912 . G . PASS END=70905921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1148:0,93,255:31,0 chr2 70905922 . A . PASS END=70905922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 70905923 . G . PASS END=70905938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:29,0 chr2 70905939 . T . PASS END=70905939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 70905940 . G . PASS END=70905943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 70905944 . C . PASS END=70905945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr2 70905946 . T . PASS END=70905951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr2 70905952 . C . PASS END=70905954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 70905955 . G . PASS END=70905986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1202:0,92,255:35,0 chr2 70905987 . T . PASS END=70905987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:31,0 chr2 70905988 . C . PASS END=70906070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1112:0,83,255:38,0 chr2 70906071 . T . PASS END=70906078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:24,0 chr2 70906079 . A . PASS END=70906079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:20,0 chr2 70906080 . C . PASS END=70906081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr2 70906082 . T . PASS END=70906082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 70906083 . G . PASS END=70906088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 70906089 . T . PASS END=70906093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:17,0 chr2 70910723 . C . PASS END=70910732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 70910733 . A . PASS END=70910733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 70910734 . G . PASS END=70910735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr2 70910736 . A . PASS END=70910736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 70910737 . T . PASS END=70910754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1116:0,87,255:30,0 chr2 70910755 . A . PASS END=70910755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1002:0,79,255:29,0 chr2 70910756 . C . PASS END=70910774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr2 70910775 . C . PASS END=70910808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,900:0,72,255:25,0 chr2 70910809 . A . PASS END=70910831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,56,255:19,0 chr2 70910832 . G . PASS END=70910839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 70910840 . C . PASS END=70910872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,607:0,51,255:17,0 chr2 70910873 . T . PASS END=70910876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 70910877 . C . PASS END=70910899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:8:0,21,315:0,24,255:8,0 chr2 70915156 . C . PASS END=70915254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,103,1665:0,103,255:40,0 chr2 70917918 . C . PASS END=70917918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 70917919 . T . PASS END=70917919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 70917920 . T . PASS END=70917925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 70917926 . T . PASS END=70917926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:21,0 chr2 70917927 . G . PASS END=70917928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 70917929 . G . PASS END=70917929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 70917930 . T . PASS END=70917930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 70917931 . C . PASS END=70917931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 70917932 . C . PASS END=70917932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 70917933 . A . PASS END=70917947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:33,0 chr2 70917948 . G . PASS END=70917948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:32,0 chr2 70917949 . T . PASS END=70917962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1182:0,99,255:33,0 chr2 70917963 . T . PASS END=70917963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr2 70917964 . T . PASS END=70917981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1166:0,83,255:35,0 chr2 70917982 . T . PASS END=70917982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1117:0,68,255:32,0 chr2 70917983 . T . PASS END=70918023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1103:0,83,255:32,0 chr2 70918024 . T . PASS END=70918024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 70918025 . G . PASS END=70918025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 70918026 . G . PASS END=70918061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:26,0 chr2 70919535 . C . PASS END=70919535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 70919536 . G . PASS END=70919536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 70919537 . C . PASS END=70919539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr2 70919540 . C . PASS END=70919540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 70919541 . T . PASS END=70919560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:19,0 chr2 70919561 . G . PASS END=70919582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,723:0,60,255:26,0 chr2 70919583 . C . PASS END=70919667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1039:0,81,255:36,0 chr2 70919668 . A . PASS END=70919684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr2 70922853 . C . PASS END=70922933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,145,255:40,0 chr2 70923377 . C . PASS END=70923380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr2 70923381 . A . PASS END=70923386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,847:0,63,255:24,0 chr2 70923387 . G . PASS END=70923528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,987:0,84,255:40,0 chr2 70931453 . T . LowGQ END=70931453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,670:22,0,255:23,0 chr2 70931454 . C . PASS END=70931454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:32:27:0,32,873:0,32,255:23,0 chr2 70931455 . A . PASS END=70931455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:24,0 chr2 70931456 . T . PASS END=70931456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,723:0,9,255:23,0 chr2 70931457 . G . PASS END=70931457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,776:0,31,255:23,0 chr2 70931458 . G . PASS END=70931458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 70931459 . A . PASS END=70931459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,818:0,15,255:23,0 chr2 70931460 . A . PASS END=70931460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:24,0 chr2 70931461 . G . LowGQ END=70931461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,759:44,0,255:23,0 chr2 70931462 . A . PASS END=70931462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr2 70931463 . T . PASS END=70931463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,961:0,40,255:26,0 chr2 70931464 . G . PASS END=70931464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:8:32:0,8,951:0,8,255:28,0 chr2 70931465 . T . PASS END=70931465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 70931466 . C . PASS END=70931466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:16:32:0,16,961:0,16,255:28,0 chr2 70931467 . G . PASS END=70931467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 70931468 . G . PASS END=70931469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 70931470 . A . PASS END=70931470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,986:0,10,255:29,0 chr2 70931471 . A . PASS END=70931471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 70931472 . G . PASS END=70931473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:31,0 chr2 70931474 . C . PASS END=70931474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:13:33:0,13,1039:0,13,255:30,0 chr2 70931475 . T . PASS END=70931476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr2 70931477 . C . PASS END=70931482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1217:0,86,255:33,0 chr2 70931483 . A . PASS END=70931484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:32,0 chr2 70931485 . G . PASS END=70931487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:32,0 chr2 70931488 . C . PASS END=70931488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:14:36:0,14,1133:0,14,255:32,0 chr2 70931489 . T . PASS END=70931489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 70931490 . G . PASS END=70931490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr2 70931491 . G . PASS END=70931491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 70931492 . C . PASS END=70931492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1249:0,34,255:34,0 chr2 70931493 . C . PASS END=70931494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:89:35:0,89,1241:0,89,255:34,0 chr2 70931495 . T . PASS END=70931495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:34,0 chr2 70931496 . G . PASS END=70931500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:35:0,80,1252:0,80,255:36,0 chr2 70931501 . C . PASS END=70931501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr2 70931502 . C . PASS END=70931558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1211:0,88,255:39,0 chr2 70931559 . C . PASS END=70931559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:31,0 chr2 70931560 . T . PASS END=70931586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1197:0,88,255:32,0 chr2 70931587 . A . PASS END=70931590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 70931591 . A . PASS END=70931591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 70933358 . G . PASS END=70933366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:24,0 chr2 70933367 . C . PASS END=70933367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 70933368 . A . PASS END=70933402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,833:0,72,255:26,0 chr2 70933403 . G . PASS END=70933404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 70933405 . T . PASS END=70933408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 70933409 . G . PASS END=70933409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 70933410 . T . PASS END=70933410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 70933411 . C . PASS END=70933434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:30,0 chr2 70933435 . T . PASS END=70933435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr2 70933436 . G . PASS END=70933444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 70933445 . C . PASS END=70933445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:30,0 chr2 70933446 . A . PASS END=70933475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1194:0,89,255:32,0 chr2 70933476 . T . PASS END=70933476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 70933477 . C . PASS END=70933491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1215:0,89,255:32,0 chr2 70933492 . C . PASS END=70933492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:27,0 chr2 70933493 . C . PASS END=70933501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 70933502 . C . PASS END=70933502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 70933503 . G . PASS END=70933567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,951:0,90,255:36,0 chr2 70933568 . T . PASS END=70933574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:25,0 chr2 70995018 . C . PASS END=70995031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:25,0 chr2 71004492 . T C, 42.98 PASS DP=98;MQ=249.43;MQRankSum=7.496;ReadPosRankSum=1.905;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:66,32,0:0.327,0.000:98:33,18,0:33,14,0:42:78,0,47,178,178,178:255,0,255:40,0:4.2979e+01,2.6223e-04,5.0000e+01,1.7775e+02,2.1252e+02,1.8076e+02:0.00,34.77,37.78,34.77,69.54,37.78:39,27,23,9:36,30,19,13:71004492 chr2 71004499 . T . PASS END=71004514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:99:0,120,1800:0,250,255:40,1 chr2 71004769 . C . PASS END=71004803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,209,255:40,0 chr2 71012547 . C . PASS END=71012548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 71012549 . G . PASS END=71012552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 71012553 . T . PASS END=71012553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 71012554 . C . PASS END=71012554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 71012555 . T . PASS END=71012555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 71012556 . G . PASS END=71012557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 71012558 . T . PASS END=71012558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 71012559 . T . PASS END=71012566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,712:0,69,255:23,0 chr2 71012567 . T . PASS END=71012574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,793:0,69,255:24,0 chr2 71012575 . G . PASS END=71012603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:27:0,81,1002:0,81,255:40,1 chr2 71012604 . G A, 50.00 PASS DP=42;MQ=249.84;MQRankSum=5.029;ReadPosRankSum=1.643;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,23,0:0.548,0.000:42:7,14,0:12,9,0:48:85,0,49,814,680,1494:255,0,255:19,0:5.0000e+01,6.9375e-05,5.2232e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,8,13,10:11,8,10,13 chr2 71012605 . T . PASS END=71012641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,131,255:40,0 chr2 71012642 . C . PASS END=71012696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,155,255:40,0 chr2 71012697 . T . PASS END=71012733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,163,255:40,0 chr2 71012734 . C G, 50.00 PASS DP=63;MQ=248.51;MQRankSum=5.623;ReadPosRankSum=4.198;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,35,0:0.556,0.000:63:11,18,0:17,17,0:48:85,0,49,1214,971,2185:255,0,255:23,0:5.0000e+01,7.1446e-05,5.1912e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,20,14,21:11,17,13,22 chr2 71012735 . T . PASS END=71012771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:33:0,90,1350:0,99,255:40,0 chr2 71014770 . T . PASS END=71014770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 71014781 . C . PASS END=71014807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr2 71014808 . A . PASS END=71014809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 71014810 . C . PASS END=71014811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 71014812 . C . PASS END=71014933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:28:0,84,1003:0,84,255:40,0 chr2 71017540 . C . PASS END=71017553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:9,0 chr2 71017554 . T . PASS END=71017580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 71017581 . G . PASS END=71017581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 71017582 . C . PASS END=71017583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 71017584 . C . LowGQ END=71017584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr2 71017585 . C . PASS END=71017585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 71017586 . A . PASS END=71017589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,235:0,13,235:9,0 chr2 71017590 . G . PASS END=71017591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 71017592 . A . PASS END=71017592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 71017593 . G . PASS END=71017594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 71017595 . T . LowGQ END=71017596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:9,0 chr2 71017597 . T . PASS END=71017597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 71017598 . T . PASS END=71017600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 71017601 . G . PASS END=71017604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 71017605 . A . PASS END=71017605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 71017606 . C . PASS END=71017606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 71017607 . G . PASS END=71017607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 71017608 . A . PASS END=71017608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 71017609 . G . PASS END=71017609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 71017610 . T . PASS END=71017611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr2 71017612 . G . PASS END=71017612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 71017613 . C . PASS END=71017613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 71017614 . C . PASS END=71017619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 71017620 . A . PASS END=71017620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 71017621 . G . PASS END=71017623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 71017624 . C . PASS END=71017625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 71017626 . G . PASS END=71017634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr2 71017635 . G . PASS END=71017635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 71017636 . C . PASS END=71017639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 71017640 . C . PASS END=71017640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 71017641 . A . PASS END=71017642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 71017643 . A . PASS END=71017643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr2 71017644 . C . PASS END=71017651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr2 71017652 . A . PASS END=71017653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 71017654 . C . PASS END=71017655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 71017656 . G . PASS END=71017663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:12,0 chr2 71017664 . G . PASS END=71017664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 71017665 . G . PASS END=71017672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 71017673 . T . PASS END=71017673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 71017674 . G . PASS END=71017687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 71017688 . T . PASS END=71017689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 71017690 . C . PASS END=71017699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:11,0 chr2 71017700 . T . PASS END=71017700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 71017701 . C . PASS END=71017707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 71017708 . C . PASS END=71017745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:9,0 chr2 71017746 . C . PASS END=71017746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 71017747 . T . PASS END=71017747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 71017748 . A . PASS END=71017764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,180:6,0 chr2 71017765 . G . PASS END=71017765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:3,0 chr2 71017766 . T . PASS END=71017766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:4,0 chr2 71017767 . C . PASS END=71017770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,210:3,0 chr2 71036229 . T . PASS END=71036282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,103,1617:0,103,255:40,0 chr2 71036326 . T . PASS END=71036341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,161,255:40,0 chr2 71036403 . T . PASS END=71036514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:42:0,84,1260:0,98,255:40,0 chr2 71036871 . G . PASS END=71036950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1210:0,83,255:36,0 chr2 71036951 . C . PASS END=71036964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:25:0,63,945:0,75,255:25,0 chr2 71036965 . T . PASS END=71036989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 71039579 . C . PASS END=71039589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,872:0,72,255:25,0 chr2 71039590 . T . PASS END=71039590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 71039591 . G . PASS END=71039595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr2 71039596 . C . PASS END=71039708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,958:0,81,255:40,0 chr2 71039709 . A . PASS END=71039709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:33,0 chr2 71039710 . G . PASS END=71039730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1247:0,86,255:34,0 chr2 71043126 . T . PASS END=71043423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:35:0,85,1203:0,85,255:40,0 chr2 71043424 . C . PASS END=71043460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:43:0,97,1590:0,97,255:40,0 chr2 71043461 . C T, 194.47 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,26,0:0,23,0:144:232,147,0,1892,147,1892:255,147,0:0,0:1.9447e+02,1.4447e+02,0.0000e+00,4.5000e+02,1.7924e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,25:0,0,21,28 chr2 71043462 . G . PASS END=71043498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,106,1682:0,106,255:40,0 chr2 71043499 . C . PASS END=71043671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1121:0,85,255:40,1 chr2 71043672 . C . PASS END=71043672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1158:0,64,255:35,0 chr2 71043673 . T . PASS END=71043845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:95:35:0,95,1076:0,95,255:40,0 chr2 71043846 . T . PASS END=71043846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr2 71043847 . T . PASS END=71044173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:36:0,84,1303:0,84,255:40,0 chr2 71044174 . A . PASS END=71044210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,113,1800:0,113,255:40,0 chr2 71044211 . C T, 203.04 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,27,0:0,25,0:153:241,156,0,1979,156,1979:255,159,0:0,0:2.0304e+02,1.5304e+02,0.0000e+00,4.5000e+02,1.8781e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,30:0,0,27,25 chr2 71044212 . G . PASS END=71044248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,135,255:40,0 chr2 71044249 . A . PASS END=71044329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:33:0,93,1227:0,99,255:40,0 chr2 71046487 . T . PASS END=71046834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:88:35:0,88,1395:0,88,255:40,0 chr2 71046835 . A . PASS END=71046835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:32,0 chr2 71046836 . T . PASS END=71047023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:34:0,91,1205:0,91,255:40,0 chr2 71047595 . C . PASS END=71047603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 71047604 . G . PASS END=71047606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71047607 . G . PASS END=71047616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1019:0,84,255:28,0 chr2 71047617 . C . PASS END=71047655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 71052428 . C . PASS END=71052452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 71052453 . G . PASS END=71052453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 71052454 . G . PASS END=71052454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 71052455 . G T, 86.12 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,9,0:0,4,0:36:124,39,0,480,39,480:255,39,0:0,0:8.6118e+01,3.6118e+01,1.0620e-03,4.5000e+02,7.0888e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,6:0,0,5,8 chr2 71052456 . A . PASS END=71052457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 71052458 . C . PASS END=71052458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 71057940 . C . PASS END=71057961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1230:0,97,255:38,0 chr2 71057962 . T . PASS END=71057962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1083:0,42,255:35,0 chr2 71057963 . C . PASS END=71057967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:38:0,80,1132:0,80,255:38,0 chr2 71057968 . T . PASS END=71057968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:33:38:0,33,963:0,33,255:33,0 chr2 71057969 . T . PASS END=71057974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:38:0,83,1199:0,83,255:38,0 chr2 71057975 . T . LowGQ END=71057975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,8:39:0:39:0,0,943:52,0,255:31,0 chr2 71057976 . G . PASS END=71057978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,99,1438:0,99,255:40,0 chr2 71057979 . T . PASS END=71057979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1328:0,68,255:39,0 chr2 71057980 . T . PASS END=71057980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1538:0,118,255:40,0 chr2 71057981 . C . PASS END=71057982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1321:0,63,255:40,0 chr2 71057983 . C . PASS END=71057984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:45:0,96,1440:0,96,255:40,0 chr2 71057985 . T . PASS END=71057985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:4:46:0,4,1254:0,4,255:40,0 chr2 71057986 . T . PASS END=71057987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr2 71057988 . C . PASS END=71057988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:54:45:0,54,1345:0,54,255:40,0 chr2 71057989 . C . PASS END=71057990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,102,1582:0,102,255:40,0 chr2 71057991 . T . PASS END=71057991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:46:45:0,46,1248:0,46,255:40,0 chr2 71057992 . T . PASS END=71057992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 71057993 . C . PASS END=71057993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:16:45:0,16,1282:0,16,255:40,0 chr2 71057994 . C . PASS END=71057995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 71057996 . G . PASS END=71057996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1296:0,52,255:40,0 chr2 71057997 . C . PASS END=71058005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,105,1537:0,105,255:40,0 chr2 71058006 . A . PASS END=71058007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:47:0,111,1645:0,111,255:40,0 chr2 71058008 . A . PASS END=71058008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1467:0,69,255:39,0 chr2 71058009 . C . PASS END=71058009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:83:46:0,83,1537:0,83,255:40,0 chr2 71058010 . G . PASS END=71058010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1435:0,60,255:39,0 chr2 71058011 . T . PASS END=71058013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1512:0,110,255:40,0 chr2 71058014 . G . PASS END=71058015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:76:42:0,76,1396:0,76,255:40,0 chr2 71058016 . G . PASS END=71058016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 71058017 . A . PASS END=71058017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:38:42:0,38,1278:0,38,255:37,0 chr2 71058018 . A . PASS END=71058021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1431:0,109,255:39,0 chr2 71058022 . C . PASS END=71058022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1388:0,79,255:35,0 chr2 71058023 . C . PASS END=71058024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1467:0,96,255:37,0 chr2 71058025 . G . PASS END=71058026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1394:0,76,255:34,0 chr2 71058027 . C . PASS END=71058027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:42:0,96,1440:0,126,255:32,0 chr2 71058028 . A . PASS END=71058028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:48:42:0,48,1404:0,48,255:32,0 chr2 71058029 . A . PASS END=71058029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:41:0,93,1395:0,123,255:31,0 chr2 71058030 . G . PASS END=71058030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1341:0,73,255:30,0 chr2 71058031 . A . PASS END=71058032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1350:0,90,255:30,0 chr2 71058033 . A . PASS END=71058033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1313:0,43,255:30,0 chr2 71058034 . G . PASS END=71058035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1239:0,64,255:30,0 chr2 71058036 . C . PASS END=71058037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1250:0,81,255:29,0 chr2 71058038 . G . PASS END=71058038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 71058039 . A . PASS END=71058039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1099:0,35,255:22,0 chr2 71058040 . C . PASS END=71058045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:32:0,60,1080:0,60,255:25,0 chr2 71058046 . A . PASS END=71058046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1086:0,44,255:24,0 chr2 71058047 . A . PASS END=71058047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 71058048 . T . PASS END=71058048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,994:0,27,255:24,0 chr2 71058049 . G . PASS END=71058049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:4:31:0,4,799:0,4,255:25,0 chr2 71058050 . C . PASS END=71058051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 71058052 . A . PASS END=71058052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:23,0 chr2 71058181 . T . PASS END=71058183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,136,255:40,0 chr2 71058184 . C T, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=2.154;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,26,0:0.531,0.000:49:14,12,0:9,14,0:48:85,0,50,929,823,1752:255,0,255:22,0:5.0000e+01,6.6786e-05,5.2670e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,12,14:15,8,16,10 chr2 71058185 . G . PASS END=71058268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,140,255:40,0 chr2 71058269 . G . LowGQ END=71058269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,10:52:0:52:0,0,1202:24,0,255:39,0 chr2 71058270 . C . PASS END=71058306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1215:0,94,255:40,0 chr2 71058307 . G . PASS END=71058312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:29,0 chr2 71058313 . C . PASS END=71058330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,62,255:25,0 chr2 71058331 . C . PASS END=71058331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr2 71058832 . C . PASS END=71058834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr2 71058835 . A G, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.805;ReadPosRankSum=1.639;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:6,11,0:10,5,0:48:85,0,50,543,543,1087:255,0,255:16,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,12,4:8,8,7,9 chr2 71058836 . C . PASS END=71058856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1189:0,96,255:37,0 chr2 71058857 . G . PASS END=71058860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:37,0 chr2 71058861 . G . PASS END=71058872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1435:0,82,255:40,0 chr2 71058873 . G . PASS END=71058950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:33:0,83,1208:0,83,255:40,0 chr2 71060031 . C . PASS END=71060031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 71060032 . T . PASS END=71060032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 71060033 . G . PASS END=71060038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 71060039 . T . PASS END=71060039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:22,0 chr2 71060040 . C . PASS END=71060047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 71060048 . T . PASS END=71060048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 71060049 . C . PASS END=71060049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 71060050 . A . PASS END=71060073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:30,0 chr2 71060074 . G . PASS END=71060106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:33,0 chr2 71060107 . T . PASS END=71060107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 71060108 . T . PASS END=71060110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,997:0,90,255:30,0 chr2 71060111 . G A, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=1.535;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:6,7,0:9,8,0:48:85,0,50,525,536,1061:255,0,255:15,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,10,5:7,8,6,9 chr2 71060112 . A . PASS END=71060114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 71060115 . G . PASS END=71060115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 71060116 . A . PASS END=71060121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1115:0,90,255:30,0 chr2 71060122 . A . PASS END=71060122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 71060123 . A . PASS END=71060128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:32,0 chr2 71060129 . A . PASS END=71060129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr2 71060130 . G . PASS END=71060133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:31,0 chr2 71060134 . T . PASS END=71060134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1042:0,65,255:30,0 chr2 71060135 . T . PASS END=71060137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr2 71060138 . C . PASS END=71060141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr2 71060142 . G . PASS END=71060145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr2 71060146 . T . PASS END=71060146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 71060147 . A . PASS END=71060148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr2 71060149 . T . PASS END=71060150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 71060151 . C . PASS END=71060151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr2 71060152 . C . PASS END=71060153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 71060154 . G . PASS END=71060154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 71060155 . C . PASS END=71060155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 71060156 . C . PASS END=71060156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 71060157 . T . PASS END=71060160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr2 71060161 . G . PASS END=71060161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 71060162 . A . PASS END=71060165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71060166 . C . PASS END=71060170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,71,255:25,0 chr2 71060171 . G . PASS END=71060171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:22,0 chr2 71060172 . T . PASS END=71060180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:23,0 chr2 71060181 . A . PASS END=71060182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:21,0 chr2 71060777 . T . PASS END=71060898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1152:0,83,255:40,0 chr2 71060899 . C . PASS END=71060935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,122,255:40,0 chr2 71060936 . G C, 45.59 PASS DP=49;MQ=250.00;MQRankSum=5.838;ReadPosRankSum=3.724;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,19,0:0.388,0.000:49:12,9,0:18,10,0:45:80,0,50,675,1064,1739:255,0,255:28,0:4.5588e+01,1.4160e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,14,8,11:16,14,8,11 chr2 71060937 . T . PASS END=71060973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:48:0,92,1727:0,92,255:40,0 chr2 71060974 . A . PASS END=71061124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:35:0,81,1215:0,85,255:40,0 chr2 71061125 . C . PASS END=71061145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:25,0 chr2 71061146 . G . PASS END=71061151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:18,0 chr2 71062622 . A . PASS END=71062738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:47:0,120,1800:0,124,255:40,0 chr2 71062834 . C . LowGQ END=71062835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:39,4:43:0:43:0,0,0:26,0,142:39,0 chr2 71062836 . C . PASS END=71062836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:10:42:0,10,1388:0,10,255:39,0 chr2 71062837 . G . PASS END=71062876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1441:0,82,255:40,0 chr2 71062877 . C . PASS END=71062877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1463:0,71,255:37,0 chr2 71062878 . G . PASS END=71062906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,105,255:40,0 chr2 71127752 . A . PASS END=71127754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 71127755 . G . PASS END=71127758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr2 71127759 . A . PASS END=71127765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 71127766 . C . PASS END=71127766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 71127767 . G . PASS END=71127768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 71127769 . C . PASS END=71127769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 71127770 . G . PASS END=71127798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr2 71127799 . G . PASS END=71127799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 71127800 . G . PASS END=71127821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,551:0,41,255:17,0 chr2 71127822 . G . PASS END=71127822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 71127823 . C . PASS END=71127831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 71127832 . C . PASS END=71127836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71127837 . G . PASS END=71127837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 71127838 . C . PASS END=71127845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 71127846 . G . PASS END=71127857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 71127858 . C . PASS END=71127861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71127862 . T . PASS END=71127870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 71127871 . C . PASS END=71127873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 71127874 . C . PASS END=71127879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 71127880 . A . PASS END=71127880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:18,0 chr2 71127881 . A . PASS END=71127888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 71127889 . G . PASS END=71127898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 71127899 . T . PASS END=71127899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 71127900 . C . PASS END=71127916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr2 71127917 . G . PASS END=71127917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 71127918 . G . PASS END=71127922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 71127923 . A . PASS END=71127961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr2 71127962 . G . PASS END=71127970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 71127971 . G . PASS END=71127971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:10,0 chr2 71127972 . A . PASS END=71127998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 71148228 . A . PASS END=71148325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:18,0 chr2 71148326 . C . PASS END=71148326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 71148327 . G . PASS END=71148327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 71148328 . C . PASS END=71148328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 71148329 . C . PASS END=71148346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:13:0,30,450:0,32,255:13,0 chr2 71148347 . C . PASS END=71148354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:23:12:0,23,405:0,23,255:9,0 chr2 71148355 . G . LowGQ END=71148355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr2 71148356 . T . PASS END=71148366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 71148367 . C . PASS END=71148373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 71148374 . C . LowGQ END=71148374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:6,0 chr2 71148375 . G . PASS END=71148378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 71148379 . T . PASS END=71148398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr2 71148399 . A . PASS END=71148409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 71148410 . A . PASS END=71148411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 71148412 . C . PASS END=71148415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr2 71151406 . A . PASS END=71151423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,204,255:40,0 chr2 71159897 . G . PASS END=71159899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,890:0,62,255:26,0 chr2 71159900 . A . PASS END=71159900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,748:0,45,255:24,0 chr2 71159901 . A . PASS END=71159902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,796:0,64,255:26,0 chr2 71159903 . G . PASS END=71159903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 71159904 . T . PASS END=71159904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr2 71159905 . C . PASS END=71159905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr2 71159906 . T . PASS END=71159906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:18:28:0,18,804:0,18,255:24,0 chr2 71159907 . G . PASS END=71159908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 71159909 . T . PASS END=71159909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr2 71159910 . T . PASS END=71159910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 71159911 . C . PASS END=71159911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:27,0 chr2 71159912 . C . PASS END=71159913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 71159914 . G . PASS END=71159914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 71159915 . A . PASS END=71159916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71159917 . C . PASS END=71159917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,833:0,51,255:26,0 chr2 71159918 . C . PASS END=71159919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71159920 . C . PASS END=71159920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr2 71159921 . C . PASS END=71159922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 71159923 . C . PASS END=71159923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:27,0 chr2 71159924 . A . PASS END=71159924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,839:0,37,255:26,0 chr2 71159925 . C . PASS END=71159925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 71159926 . C . PASS END=71159926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 71159927 . A . PASS END=71159927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,878:0,32,255:26,0 chr2 71159928 . A . PASS END=71159928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71159929 . G . PASS END=71159929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,934:0,60,255:27,0 chr2 71159930 . C . PASS END=71159930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr2 71159931 . A . PASS END=71159931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 71159932 . G . PASS END=71159932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:28,0 chr2 71159933 . A . PASS END=71159935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1113:0,82,255:30,0 chr2 71159936 . A . PASS END=71159936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1006:0,60,255:30,0 chr2 71159937 . A . PASS END=71159938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 71159939 . G . PASS END=71159939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,980:0,52,255:29,0 chr2 71159940 . A . PASS END=71159940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1150:0,85,255:31,0 chr2 71159941 . C . PASS END=71159941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1147:0,47,255:31,0 chr2 71159942 . C . PASS END=71159948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1242:0,89,255:31,0 chr2 71159949 . G . PASS END=71159949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:29,0 chr2 71159950 . A . PASS END=71159957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1044:0,80,255:32,0 chr2 71159958 . A . PASS END=71159958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1072:0,52,255:30,0 chr2 71159959 . G . PASS END=71159959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:27,0 chr2 71159960 . A . PASS END=71159962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1058:0,82,255:29,0 chr2 71159963 . C . PASS END=71159963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr2 71159964 . G . PASS END=71159980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:30,0 chr2 71159981 . T . PASS END=71159981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,969:0,43,255:26,0 chr2 71159982 . C . PASS END=71159990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 71159991 . T . PASS END=71159992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 71159993 . G . PASS END=71159993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71159994 . C . PASS END=71159994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 71159995 . C . PASS END=71159995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71159996 . A . PASS END=71159997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:26,0 chr2 71159998 . C . PASS END=71160005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71160006 . T . PASS END=71160016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1055:0,71,255:25,0 chr2 71160017 . C . PASS END=71160017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 71160018 . T . PASS END=71160035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,917:0,64,255:26,0 chr2 71160036 . T . PASS END=71160062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 71160063 . T . PASS END=71160065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,580:0,15,255:19,1 chr2 71160066 . C . PASS END=71160066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 71160067 . G . PASS END=71160067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr2 71160068 . C . PASS END=71160081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,566:0,45,255:19,0 chr2 71160082 . G . PASS END=71160092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 71160093 . C . PASS END=71160095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 71160096 . C . PASS END=71160099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 71160100 . C . PASS END=71160104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 71160105 . G . PASS END=71160105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 71160106 . G . PASS END=71160107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 71160108 . G . PASS END=71160121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr2 71160122 . G . PASS END=71160122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr2 71160123 . A . PASS END=71160123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr2 71160124 . C . PASS END=71160148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 71160149 . A . PASS END=71160152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 71160153 . C . PASS END=71160155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 71160156 . T . PASS END=71160160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 71160161 . T . PASS END=71160191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 71160192 . C . PASS END=71160201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 71160202 . T . PASS END=71160202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 71160203 . G . PASS END=71160212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 71160213 . C . PASS END=71160213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 71160214 . C . PASS END=71160237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:12,0 chr2 71160238 . T . PASS END=71160238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 71160239 . G . PASS END=71160242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 71160243 . G . PASS END=71160249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 71160250 . A . PASS END=71160250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr2 71160251 . C . PASS END=71160269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,466:0,39,255:13,0 chr2 71160270 . A . LowGQ END=71160270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr2 71160271 . G . PASS END=71160272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 71160273 . C . PASS END=71160273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 71160274 . A . PASS END=71160285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 71160286 . A . PASS END=71160286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 71160287 . G . PASS END=71160319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr2 71160320 . A . PASS END=71160320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:8,0 chr2 71160321 . A . PASS END=71160334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr2 71163085 . A . PASS END=71163085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:19,0 chr2 71163086 . T . PASS END=71163088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 71163089 . C . PASS END=71163091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr2 71163092 . T . PASS END=71163092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 71163093 . G . PASS END=71163093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 71163094 . G . PASS END=71163096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 71163097 . A . PASS END=71163097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 71163098 . T . PASS END=71163103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,768:0,66,255:22,0 chr2 71163104 . G . PASS END=71163104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr2 71163105 . C . PASS END=71163126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:24,0 chr2 71163127 . A . PASS END=71163127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 71163128 . G . PASS END=71163184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,792:0,62,255:26,0 chr2 71163185 . T . PASS END=71163194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr2 71163195 . C . PASS END=71163202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 71166548 . G . PASS END=71166552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 71166553 . A . PASS END=71166553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr2 71166554 . G . PASS END=71166560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr2 71166561 . A . PASS END=71166561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:26,0 chr2 71166562 . T . PASS END=71166563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71166564 . C . PASS END=71166568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,77,255:26,0 chr2 71166569 . G . PASS END=71166590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1119:0,80,255:32,0 chr2 71166591 . C . PASS END=71166591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 71166592 . T . PASS END=71166592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 71166593 . G . PASS END=71166593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 71166594 . A . PASS END=71166597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 71166598 . C . PASS END=71166598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 71166599 . T . PASS END=71166609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,956:0,81,255:27,0 chr2 71166610 . G . PASS END=71166610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 71166611 . T . PASS END=71166611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 71166612 . C . PASS END=71166616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 71169445 . T . PASS END=71169563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,105,1574:0,108,255:40,0 chr2 71170778 . C . PASS END=71170778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 71170787 . G . PASS END=71170788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr2 71170789 . C . PASS END=71170796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:21,0 chr2 71170797 . C . PASS END=71170806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:23,0 chr2 71170807 . C T, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.128;ReadPosRankSum=1.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:4,4,0:8,8,0:48:85,0,50,425,429,854:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,4.2540e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,11,1:3,9,5,7 chr2 71170808 . G . PASS END=71170825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,823:0,69,255:23,0 chr2 71170826 . G . PASS END=71170826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr2 71170827 . T . PASS END=71170842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 71170843 . G . PASS END=71170843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 71171066 . A . PASS END=71171066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 71171067 . T . PASS END=71171067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 71171068 . G . PASS END=71171068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 71171069 . G . PASS END=71171069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr2 71171070 . A . PASS END=71171071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 71171072 . G . PASS END=71171072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71171073 . C . PASS END=71171076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 71171077 . G . PASS END=71171083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1146:0,83,255:32,0 chr2 71171084 . G . PASS END=71171084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:32,0 chr2 71171085 . C . PASS END=71171093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1272:0,102,255:34,0 chr2 71171094 . A . PASS END=71171094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:33,0 chr2 71171095 . C . PASS END=71171105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:36:0,84,1349:0,84,255:38,0 chr2 71171106 . C . PASS END=71171106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1335:0,73,255:37,0 chr2 71171107 . C . PASS END=71171179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:86:34:0,86,1241:0,86,255:40,0 chr2 71171180 . A . PASS END=71171180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,0 chr2 71171181 . C . PASS END=71171189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1178:0,83,255:29,0 chr2 71171190 . G . PASS END=71171205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,922:0,62,255:27,0 chr2 71171206 . C . PASS END=71171208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71171209 . G . PASS END=71171217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:24,0 chr2 71171218 . A . PASS END=71171220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:25:0,57,855:0,75,255:19,0 chr2 71171221 . C . PASS END=71171221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:19,0 chr2 71171222 . T . PASS END=71171222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 71171223 . C . PASS END=71171227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 71171228 . C . PASS END=71171228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 71171229 . C . PASS END=71171235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,779:0,69,255:24,0 chr2 71171236 . T . PASS END=71171236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr2 71171237 . C . PASS END=71171248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,893:0,62,255:26,0 chr2 71171249 . T . PASS END=71171254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 71171255 . A . PASS END=71171256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,928:0,73,255:27,0 chr2 71171257 . C . PASS END=71171257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71171258 . G . PASS END=71171258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:24,0 chr2 71171259 . G . PASS END=71171259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:24,0 chr2 71171260 . G . PASS END=71171260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 71171261 . A . PASS END=71171261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71171262 . A . PASS END=71171264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 71171265 . A . PASS END=71171265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:23,0 chr2 71171266 . G . PASS END=71171268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1070:0,74,255:25,0 chr2 71171269 . G . PASS END=71171272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71171273 . G . PASS END=71171273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 71171274 . T . PASS END=71171282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 71171283 . A . PASS END=71171283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 71171284 . A . PASS END=71171285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 71171286 . G . PASS END=71171287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr2 71171288 . C . PASS END=71171288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71171289 . A . PASS END=71171289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71171290 . A . PASS END=71171290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,865:0,53,255:25,0 chr2 71171291 . C . PASS END=71171324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,873:0,61,255:26,0 chr2 71171325 . G . PASS END=71171325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 71171326 . C . PASS END=71171331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 71171332 . G . PASS END=71171332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 71171333 . A . PASS END=71171335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 71171336 . A . PASS END=71171336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:18,0 chr2 71171337 . T . PASS END=71171337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:19,0 chr2 71171338 . C . PASS END=71171338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 71171339 . T . PASS END=71171350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,675:0,44,255:19,0 chr2 71171351 . A . PASS END=71171354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:13,0 chr2 71171355 . G . PASS END=71171355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,443:0,15,255:12,0 chr2 71171356 . G . PASS END=71171358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 71171359 . G . PASS END=71171359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 71185175 . G . PASS END=71185274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:37:0,94,1254:0,94,255:40,0 chr2 71185463 . G . PASS END=71185557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,130,255:40,0 chr2 71186142 . C . PASS END=71186142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 71186147 . G . PASS END=71186209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,105,1651:0,105,255:40,0 chr2 71186210 . T . PASS END=71186210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1488:0,71,255:38,0 chr2 71186211 . T . PASS END=71186217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1465:0,104,255:39,0 chr2 71186218 . T . PASS END=71186218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:35,0 chr2 71186219 . A . PASS END=71186225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1418:0,101,255:36,0 chr2 71187069 . G . PASS END=71187096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1246:0,87,255:39,0 chr2 71187097 . C . PASS END=71187097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr2 71187098 . T . PASS END=71187173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:38:0,90,1388:0,90,255:40,0 chr2 71187174 . C . PASS END=71187174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr2 71187175 . C . PASS END=71187201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:35,0 chr2 71187202 . C . PASS END=71187209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:24,0 chr2 71188051 . A . PASS END=71188055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1001:0,71,255:28,0 chr2 71188056 . C . PASS END=71188056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 71188057 . G . PASS END=71188058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 71188059 . T . PASS END=71188059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr2 71188060 . C . PASS END=71188060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 71188061 . A . PASS END=71188061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr2 71188062 . G . PASS END=71188062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 71188063 . A . PASS END=71188068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1078:0,90,255:31,0 chr2 71188069 . C . PASS END=71188069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 71188070 . G . PASS END=71188082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1172:0,80,255:32,0 chr2 71188083 . G . PASS END=71188083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr2 71188084 . G . PASS END=71188169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:34:0,80,1260:0,80,255:40,0 chr2 71188170 . A . PASS END=71188173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1131:0,77,255:26,0 chr2 71188719 . T . PASS END=71188719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 71188726 . G . PASS END=71188824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,108,1522:0,109,255:40,0 chr2 71189907 . G . PASS END=71190030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:35:0,102,1341:0,105,255:40,0 chr2 71190291 . G . PASS END=71190292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1319:0,105,255:35,0 chr2 71190293 . T . PASS END=71190293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1096:0,66,255:34,0 chr2 71190294 . C . PASS END=71190346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1199:0,88,255:40,0 chr2 71190347 . A . PASS END=71190383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,120,1800:0,120,255:40,0 chr2 71190384 . C T, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.798;ReadPosRankSum=3.415;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,29,0:0.604,0.000:48:10,17,0:9,12,0:47:85,0,46,1019,663,1682:255,0,255:18,0:5.0000e+01,9.5779e-05,4.9199e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,13,19,10:9,10,19,10 chr2 71190385 . G . PASS END=71190421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,98,255:40,0 chr2 71190422 . T . PASS END=71190442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:26,0 chr2 71190689 . A . PASS END=71190689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 71190702 . A . PASS END=71190784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:46:0,105,1575:0,122,255:40,0 chr2 71190794 . T . PASS END=71190794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 71191200 . G . PASS END=71191217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:84:0,120,1800:0,123,255:40,0 chr2 71191218 . G . PASS END=71191218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,7:87:78:87:0,78,2675:0,78,255:40,0 chr2 71191219 . A . PASS END=71191226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,3:90:99:87:0,101,1800:0,101,255:40,0 chr2 71191227 . C . PASS END=71191227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,9:90:40:90:0,40,2579:0,40,255:40,0 chr2 71191228 . T . PASS END=71191233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,6:90:95:90:0,95,1800:0,95,255:40,0 chr2 71191234 . C . PASS END=71191234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,13:90:32:90:0,32,2419:0,32,255:27,0 chr2 71191235 . T . PASS END=71191236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,6:91:99:90:0,108,1620:0,115,255:32,0 chr2 71191237 . G . PASS END=71191237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,9:92:61:92:0,61,2859:0,61,255:28,0 chr2 71191238 . G . PASS END=71191238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,9:92:10:92:0,10,2746:0,10,255:25,0 chr2 71191239 . C . LowGQ END=71191241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,12:92:0:92:0,0,2485:7,0,255:25,0 chr2 71191568 . A . PASS END=71191568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 71191569 . T . PASS END=71191569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:33,0 chr2 71191570 . C . PASS END=71191571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 71191572 . A . PASS END=71191572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,2 chr2 71191573 . C . PASS END=71191573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1226:0,39,255:34,2 chr2 71191574 . C . PASS END=71191574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:35,0 chr2 71191575 . C . PASS END=71191633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1135:0,80,255:37,0 chr2 71191634 . A . PASS END=71191634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr2 71191635 . T . PASS END=71191639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 71191640 . A . PASS END=71191640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr2 71191641 . G . PASS END=71191649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:33,0 chr2 71191650 . A . PASS END=71191650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1113:0,68,255:28,0 chr2 71191651 . T . PASS END=71191655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:29,0 chr2 71191656 . A . PASS END=71191664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:30:0,66,1035:0,66,255:25,0 chr2 71191665 . A . PASS END=71191665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:22,0 chr2 71191666 . C . PASS END=71191673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 71191855 . C . PASS END=71191855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71191866 . T . PASS END=71191880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:25,0 chr2 71191881 . A . PASS END=71191881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:24,0 chr2 71191882 . T . PASS END=71191892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr2 71191893 . G . PASS END=71191897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 71191898 . G . PASS END=71191898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 71191899 . G . PASS END=71191904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 71191905 . A . PASS END=71191905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 71191906 . A . PASS END=71191906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1131:0,90,255:30,0 chr2 71191907 . G . PASS END=71191907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 71191908 . G . PASS END=71191919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1117:0,80,255:33,0 chr2 71191920 . G . PASS END=71191920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:32,0 chr2 71191921 . A . PASS END=71191930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,86,255:32,0 chr2 71191931 . C . PASS END=71191932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 71191933 . C . PASS END=71191943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,92,255:32,0 chr2 71191944 . C . PASS END=71191944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:29,0 chr2 71191945 . T . PASS END=71191948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:30,0 chr2 71191949 . C . PASS END=71191950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:31,0 chr2 71191951 . A . PASS END=71191955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:31,0 chr2 71191956 . G . PASS END=71191956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr2 71191957 . A . PASS END=71191990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1111:0,80,255:31,0 chr2 71191991 . T . PASS END=71191995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 71192001 . G . PASS END=71192001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 71192088 . G . PASS END=71192089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:22:0,60,900:0,62,255:20,0 chr2 71192090 . C . PASS END=71192101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr2 71192102 . C . PASS END=71192102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 71192103 . G . PASS END=71192104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,652:0,44,255:19,0 chr2 71192105 . T . PASS END=71192105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 71192106 . C . PASS END=71192107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 71192108 . G . PASS END=71192109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 71192110 . G . PASS END=71192110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 71192111 . T . PASS END=71192118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,793:0,69,255:24,0 chr2 71192119 . G . PASS END=71192119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 71192120 . C . PASS END=71192121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 71192122 . G . PASS END=71192122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 71192123 . G . PASS END=71192125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 71192126 . C . PASS END=71192126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 71192127 . T . PASS END=71192127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 71192128 . G . PASS END=71192128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 71192129 . G . PASS END=71192129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 71192130 . G . PASS END=71192130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 71192131 . C . PASS END=71192132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 71192133 . G . PASS END=71192133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 71192134 . G . PASS END=71192135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 71192136 . A . PASS END=71192137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 71192138 . C . PASS END=71192141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 71192142 . T . PASS END=71192142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr2 71192143 . G . PASS END=71192152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,825:0,69,255:26,0 chr2 71192153 . C . PASS END=71192155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71192156 . A . PASS END=71192164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr2 71192165 . C . PASS END=71192194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr2 71192195 . G . PASS END=71192204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 71192205 . C . PASS END=71192205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71192206 . C . PASS END=71192210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 71192211 . A . PASS END=71192211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71192212 . G . PASS END=71192212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 71192213 . G . PASS END=71192215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71192216 . G . PASS END=71192218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 71192219 . C . PASS END=71192233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 71192234 . C . PASS END=71192234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 71192235 . C . PASS END=71192242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 71192243 . G . PASS END=71192245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:26,0 chr2 71192246 . C . PASS END=71192247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1051:0,85,255:30,0 chr2 71192248 . C . PASS END=71192248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr2 71192249 . T . PASS END=71192251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:29,0 chr2 71192304 . G . PASS END=71192304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 71192460 . C . PASS END=71192460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 71205776 . A . PASS END=71205786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:19,0 chr2 71205787 . G . PASS END=71205835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:26,0 chr2 71205836 . G . PASS END=71205844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr2 71205845 . A . PASS END=71205865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,962:0,65,255:26,0 chr2 71205866 . A . PASS END=71205866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,781:0,50,255:24,0 chr2 71205867 . C . PASS END=71205880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 71205881 . A . PASS END=71205881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 71205882 . T . PASS END=71205887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 71205888 . A . PASS END=71205888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 71205889 . G . PASS END=71205900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 71205901 . C . PASS END=71205901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 71205902 . T . PASS END=71205910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 71205911 . G . PASS END=71205912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 71205913 . C . PASS END=71205915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 71205916 . C . PASS END=71205927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:18,0 chr2 71205928 . G . PASS END=71205945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:12:0,30,450:0,32,255:13,0 chr2 71206227 . C . PASS END=71206229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 71206230 . G . PASS END=71206252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 71206253 . A . PASS END=71206268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:17,0 chr2 71206269 . G . PASS END=71206269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 71206270 . A . PASS END=71206270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr2 71206271 . C . PASS END=71206281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,629:0,40,255:19,0 chr2 71206282 . A . PASS END=71206293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:21,0 chr2 71206294 . C . PASS END=71206294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:19,0 chr2 71206295 . C . PASS END=71206303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 71206304 . T . PASS END=71206304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 71206305 . C . PASS END=71206305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 71206306 . A . PASS END=71206306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr2 71206307 . C . PASS END=71206308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 71206309 . C . PASS END=71206309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:23,0 chr2 71206310 . C . PASS END=71206313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 71206314 . C . PASS END=71206314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 71206315 . C . PASS END=71206327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:26,0 chr2 71206328 . G . PASS END=71206330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 71206331 . C . PASS END=71206331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 71206332 . C . PASS END=71206335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 71206336 . A . PASS END=71206336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 71206337 . A . PASS END=71206337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71206338 . G . PASS END=71206356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr2 71206357 . A . PASS END=71206357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 71206358 . T . PASS END=71206358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 71206359 . C . PASS END=71206367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr2 71206368 . G . PASS END=71206372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 71206373 . T . PASS END=71206373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71206374 . C . PASS END=71206379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 71206380 . C . PASS END=71206380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:25,0 chr2 71206381 . T . PASS END=71206381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71206382 . A . PASS END=71206385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 71206386 . C . PASS END=71206391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 71206392 . G . PASS END=71206392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:24,0 chr2 71206393 . T . PASS END=71206399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1016:0,71,255:26,0 chr2 71206400 . C . PASS END=71206400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr2 71206401 . G . PASS END=71206401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71206402 . G . PASS END=71206409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 71206410 . C . PASS END=71206422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,74,255:26,0 chr2 71206423 . C . PASS END=71206423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:22,0 chr2 71206424 . T . PASS END=71206441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,62,255:23,0 chr2 71206442 . A . PASS END=71206466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 71206467 . C . PASS END=71206473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:12,0 chr2 71206791 . G . PASS END=71206791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 71206792 . G . PASS END=71206792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71206793 . C . PASS END=71206793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 71206794 . T . PASS END=71206804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:29,0 chr2 71206805 . C . PASS END=71206805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:28,0 chr2 71206806 . C . PASS END=71206806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 71206807 . A . PASS END=71206810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 71206811 . C . PASS END=71206811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 71206812 . G . PASS END=71206812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr2 71206813 . C . PASS END=71206813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr2 71206814 . C . PASS END=71206814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 71206815 . G . PASS END=71206815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 71206816 . C . PASS END=71206827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1311:0,93,255:36,0 chr2 71206828 . A . PASS END=71206828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:36,0 chr2 71206829 . G . PASS END=71206990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,88,255:40,0 chr2 71209066 . T . PASS END=71209080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,695:0,60,255:25,0 chr2 71209081 . C . PASS END=71209082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 71209083 . C . PASS END=71209087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71209088 . C . PASS END=71209091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71209092 . T . PASS END=71209092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 71209093 . G . PASS END=71209107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 71209108 . T . PASS END=71209108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 71209109 . G . PASS END=71209216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1155:0,83,255:38,0 chr2 71209217 . C . PASS END=71209219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 71209220 . G . PASS END=71209224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 71209225 . T . PASS END=71209230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr2 71209707 . G . PASS END=71209827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,147,255:40,0 chr2 71211253 . G . PASS END=71211379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,103,1275:0,103,255:40,0 chr2 71211741 . A . PASS END=71211751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr2 71211752 . A . PASS END=71211752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,636:0,55,255:23,0 chr2 71211753 . A . PASS END=71211792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,787:0,72,255:26,0 chr2 71211793 . A . PASS END=71211793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:25,0 chr2 71211794 . G . PASS END=71211798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 71211799 . A . PASS END=71211799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 71211800 . C . PASS END=71211801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 71211802 . C . PASS END=71211802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 71211803 . A . PASS END=71211805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 71211806 . C . PASS END=71211812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 71211813 . C . PASS END=71211815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71211816 . G . PASS END=71211833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1030:0,68,255:26,0 chr2 71211834 . G . PASS END=71211834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 71211835 . C . PASS END=71211835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 71211836 . C . PASS END=71211847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:29,0 chr2 71211848 . C . PASS END=71211850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 71211851 . C . PASS END=71211851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71211852 . T . PASS END=71211852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 71211853 . C . PASS END=71211856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 71211857 . G . PASS END=71211890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:25,0 chr2 71211891 . A . PASS END=71211891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr2 71211892 . G . PASS END=71211904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 71211905 . T . PASS END=71211905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 71211906 . G . PASS END=71211932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 71211933 . C . PASS END=71211946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:18,0 chr2 71211947 . G . PASS END=71211947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:18,0 chr2 71211948 . C . PASS END=71211954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 71211955 . C . PASS END=71211955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 71211956 . C . PASS END=71211957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71211958 . T . PASS END=71211967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 71211968 . G . PASS END=71211968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:17,0 chr2 71211969 . C . PASS END=71211982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,654:0,46,255:19,0 chr2 71211983 . G . PASS END=71211983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr2 71211984 . C . PASS END=71211991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr2 71211992 . G . PASS END=71211992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 71211993 . T . PASS END=71211997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 71211998 . T . PASS END=71211999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,543:0,34,255:13,0 chr2 71212000 . T . PASS END=71212000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 71212001 . T . PASS END=71212001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 71212002 . A . PASS END=71212009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 71212010 . C . PASS END=71212011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 71212012 . C . PASS END=71212012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 71212013 . C . PASS END=71212013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 71212014 . G . PASS END=71212018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:17,0 chr2 71212019 . A . PASS END=71212019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 71212020 . C . PASS END=71212023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 71212024 . C . PASS END=71212026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:15,0 chr2 71212027 . C . PASS END=71212027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 71212028 . C . PASS END=71212028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr2 71212029 . A . PASS END=71212037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 71212038 . A . PASS END=71212038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 71212039 . G . PASS END=71212040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,468:0,45,255:15,0 chr2 71212041 . C . PASS END=71212106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,435:0,39,255:13,0 chr2 71212107 . C . PASS END=71212107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 71212108 . T . PASS END=71212122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 71212123 . A . PASS END=71212123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 71212124 . T . PASS END=71212124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 71212125 . G . PASS END=71212125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 71212126 . G . PASS END=71212131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,565:0,32,255:13,0 chr2 71212132 . G . PASS END=71212138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 71212139 . G . PASS END=71212139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 71212140 . C . PASS END=71212161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 71212162 . A . PASS END=71212162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:15,0 chr2 71212163 . C . PASS END=71212188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr2 71212189 . C . PASS END=71212189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 71212190 . T . PASS END=71212221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:19,0 chr2 71212222 . G . PASS END=71212236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:25,0 chr2 71212237 . G . PASS END=71212240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71212241 . G . PASS END=71212241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71212242 . A . PASS END=71212253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 71212254 . G . PASS END=71212255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 71212256 . C . PASS END=71212264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71212265 . C . PASS END=71212318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr2 71212319 . G . PASS END=71212330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 71212331 . G . PASS END=71212340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71212341 . C . PASS END=71212348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr2 71212349 . C . PASS END=71212376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr2 71212377 . G . PASS END=71212380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,770:0,55,255:19,0 chr2 71212381 . G . PASS END=71212381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 71212382 . A . PASS END=71212387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr2 71212388 . T . PASS END=71212392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71212393 . G . PASS END=71212403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr2 71212404 . C . PASS END=71212404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 71212405 . T . PASS END=71212405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:13,0 chr2 71212406 . G . PASS END=71212407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 71212408 . C . PASS END=71212409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 71212410 . T . PASS END=71212410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr2 71212411 . C . PASS END=71212414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 71212415 . A . LowGQ END=71212415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,269:24,0,255:10,0 chr2 71212416 . C . PASS END=71212416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 71212417 . A . PASS END=71212418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr2 71212419 . A . PASS END=71212419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 71212420 . C . PASS END=71212421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 71212422 . A . PASS END=71212422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 71212423 . A . PASS END=71212426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 71212427 . A . PASS END=71212427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,357:0,9,255:12,0 chr2 71212428 . T . PASS END=71212428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 71212429 . A . PASS END=71212429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 71212430 . A . PASS END=71212430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 71215730 . T . PASS END=71215732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 71215733 . G . PASS END=71215840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1080:0,83,255:37,0 chr2 71215841 . A . PASS END=71215841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 71215842 . T . PASS END=71215845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 71216045 . C . PASS END=71216147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,120,1800:0,122,255:40,0 chr2 71216879 . C . PASS END=71216946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:78:0,120,1800:0,201,255:40,0 chr2 71218960 . C . PASS END=71218969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:32,0 chr2 71218970 . G . PASS END=71218970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr2 71218971 . A . PASS END=71218972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 71218973 . G . PASS END=71218974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1233:0,64,255:34,1 chr2 71218975 . A . PASS END=71218975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1101:0,50,255:34,0 chr2 71218976 . G . PASS END=71218979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1228:0,108,255:36,0 chr2 71218980 . G . PASS END=71218980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:35,0 chr2 71218981 . G . PASS END=71219113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:33:0,89,1310:0,89,255:40,0 chr2 71220826 . C . PASS END=71220905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,125,255:40,0 chr2 71221818 . C . PASS END=71221824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 71221825 . C . PASS END=71221825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 71221826 . A . PASS END=71221831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 71221832 . A . PASS END=71221832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 71221833 . T . PASS END=71221842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 71221843 . C . PASS END=71221843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 71221844 . T . PASS END=71221871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr2 71221872 . G . PASS END=71221887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:17:0,42,630:0,51,255:18,0 chr2 71295676 . A . PASS END=71295678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 71295679 . C . PASS END=71295680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 71295681 . C . PASS END=71295681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:13,0 chr2 71295682 . A . PASS END=71295682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,450:0,6,255:14,0 chr2 71295683 . C . PASS END=71295688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,568:0,41,255:19,0 chr2 71295689 . C . PASS END=71295692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,760:0,63,255:22,0 chr2 71295693 . G . PASS END=71295693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:8:23:0,8,722:0,8,255:21,0 chr2 71295694 . A . PASS END=71295694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:21,0 chr2 71295695 . G . PASS END=71295695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 71295696 . T . PASS END=71295697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 71295698 . A . PASS END=71295698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,796:0,39,255:22,0 chr2 71295699 . G . PASS END=71295700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr2 71295701 . T . PASS END=71295705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,819:0,72,255:24,0 chr2 71295706 . G . PASS END=71295707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,790:0,42,255:23,0 chr2 71295708 . G . PASS END=71295708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 71295709 . C . PASS END=71295709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,861:0,31,255:21,0 chr2 71295710 . G . PASS END=71295711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 71295712 . G . PASS END=71295712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,873:0,45,255:21,0 chr2 71295713 . A . PASS END=71295713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:8:26:0,8,742:0,8,255:21,0 chr2 71295714 . G . PASS END=71295714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 71295715 . G . PASS END=71295715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:22,0 chr2 71295716 . T . PASS END=71295716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,874:0,48,255:22,0 chr2 71295717 . C . PASS END=71295721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:25,0 chr2 71295722 . G . PASS END=71295722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:22,0 chr2 71295723 . A . PASS END=71295723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 71295724 . A . PASS END=71295724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,808:0,31,255:20,0 chr2 71295725 . G . PASS END=71295729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,925:0,67,255:24,0 chr2 71295730 . G . PASS END=71295737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr2 71295738 . C . PASS END=71295739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,695:0,41,255:20,0 chr2 71295740 . G . PASS END=71295740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 71295741 . A . PASS END=71295742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,667:0,55,255:20,0 chr2 71295743 . A . PASS END=71295743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,599:0,33,255:19,0 chr2 71295744 . G . PASS END=71295744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 71295745 . C . LowGQ END=71295745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,500:20,0,255:16,0 chr2 71295746 . T . PASS END=71295747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 71295748 . G . PASS END=71295749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:20,0 chr2 71295750 . G . PASS END=71295750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 71295751 . G . PASS END=71295751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 71295752 . G . LowGQ END=71295752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,512:15,0,255:18,0 chr2 71295753 . A . PASS END=71295753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 71295754 . A . PASS END=71295754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,653:0,19,255:20,0 chr2 71295755 . G . PASS END=71295755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 71295756 . G . PASS END=71295756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:20,0 chr2 71295757 . A . LowGQ END=71295757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,560:6,0,255:19,0 chr2 71295758 . G . PASS END=71295758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 71295759 . G . PASS END=71295759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,590:0,16,255:19,0 chr2 71295760 . T . PASS END=71295760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 71295761 . G . PASS END=71295761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,626:0,49,255:21,0 chr2 71295762 . T . PASS END=71295762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 71295763 . C . PASS END=71295763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 71295764 . A . PASS END=71295764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,601:0,18,255:19,0 chr2 71295765 . G . PASS END=71295766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 71295767 . C . PASS END=71295767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,607:0,19,255:19,0 chr2 71295768 . G . PASS END=71295770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 71295771 . G . PASS END=71295771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,662:0,36,255:20,0 chr2 71295772 . A . PASS END=71295772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,676:0,14,255:20,0 chr2 71295773 . G . PASS END=71295773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr2 71295774 . A . PASS END=71295774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,665:0,66,255:22,0 chr2 71295775 . G . PASS END=71295775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,653:0,33,255:20,0 chr2 71295776 . A . PASS END=71295779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,680:0,52,255:22,0 chr2 71295780 . A . PASS END=71295782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,716:0,69,255:23,0 chr2 71295783 . C . PASS END=71295783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:22,0 chr2 71295784 . G . PASS END=71295785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 71295786 . C . PASS END=71295786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,629:0,19,255:19,0 chr2 71295787 . G . PASS END=71295788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 71295789 . G . PASS END=71295790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 71295791 . C . PASS END=71295798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,853:0,66,255:22,0 chr2 71295799 . G . PASS END=71295804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr2 71295805 . A . PASS END=71295824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,675:0,44,255:19,0 chr2 71295825 . C . PASS END=71295826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 71295827 . A . PASS END=71295828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:14,0 chr2 71295829 . G . PASS END=71295835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:17:0,24,360:0,47,255:9,0 chr2 71295836 . T . PASS END=71295842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,35,255:11,0 chr2 71297632 . G . PASS END=71297657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1041:0,84,255:31,0 chr2 71297658 . T . PASS END=71297694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:30:0,89,1155:0,89,255:34,0 chr2 71297695 . T C, 50.00 PASS DP=35;MQ=250.00;MQRankSum=4.933;ReadPosRankSum=2.340;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,21,0:0.600,0.000:35:9,9,0:5,12,0:47:85,0,47,749,493,1241:255,0,255:12,0:5.0000e+01,8.7495e-05,4.9939e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,11,10:4,10,13,8 chr2 71297696 . G . PASS END=71297708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr2 71297709 . A . PASS END=71297709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,806:0,56,255:26,0 chr2 71297710 . C . PASS END=71297716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 71297871 . C . PASS END=71297885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:36,0 chr2 71297886 . A . PASS END=71297886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:34,0 chr2 71297887 . A . PASS END=71297944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:37:0,93,1329:0,93,255:40,0 chr2 71297945 . T . PASS END=71297969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:32:0,81,1215:0,89,255:34,0 chr2 71298816 . G . PASS END=71298817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,831:0,69,255:25,0 chr2 71298818 . C . PASS END=71298818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 71298819 . C . PASS END=71298821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 71298822 . T . PASS END=71298832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1015:0,81,255:29,0 chr2 71298833 . T . PASS END=71298833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 71298834 . G . PASS END=71298838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1172:0,90,255:31,0 chr2 71298839 . C . PASS END=71298839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 71298840 . C . PASS END=71298855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1350:0,93,255:37,0 chr2 71298856 . G . PASS END=71298856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr2 71298857 . G . PASS END=71298871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1413:0,101,255:39,0 chr2 71298872 . G . PASS END=71298872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,0 chr2 71298873 . C . PASS END=71298949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,96,255:39,0 chr2 71298950 . A . PASS END=71298957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 71299771 . G . PASS END=71299881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1225:0,81,255:40,0 chr2 71299956 . C . PASS END=71299968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:23,0 chr2 71299969 . A . PASS END=71299969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 71300612 . C . PASS END=71300724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,117,1665:0,119,255:40,0 chr2 71302685 . G . PASS END=71302694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,884:0,61,255:26,0 chr2 71302695 . G . PASS END=71302695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 71302696 . G . PASS END=71302696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr2 71302697 . C . PASS END=71302698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 71302699 . A . PASS END=71302699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:33,0 chr2 71302700 . G . PASS END=71302700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 71302701 . G . PASS END=71302702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:62:39:0,62,1318:0,62,255:37,0 chr2 71302703 . A . PASS END=71302703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1420:0,120,255:40,0 chr2 71302704 . T . PASS END=71302704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:9:40:0,9,1241:0,9,255:36,0 chr2 71302705 . A . PASS END=71302710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:40:0,92,1348:0,92,255:40,0 chr2 71302711 . T . PASS END=71302711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:21:42:0,21,1253:0,21,255:36,0 chr2 71302712 . C . PASS END=71302721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:91:45:0,91,1454:0,91,255:40,0 chr2 71302722 . G . PASS END=71302723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 71302724 . G . PASS END=71302724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:64:49:0,64,1466:0,64,255:40,0 chr2 71302725 . A . PASS END=71302735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:91:46:0,91,1432:0,91,255:40,0 chr2 71302736 . T . PASS END=71302736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:61:48:0,61,1381:0,61,255:40,0 chr2 71302737 . G . PASS END=71302738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,127,255:40,0 chr2 71302739 . A . PASS END=71302739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1378:0,74,255:40,0 chr2 71302740 . G . PASS END=71302745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:47:0,94,1548:0,94,255:40,0 chr2 71302746 . C . PASS END=71302747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1399:0,74,255:40,0 chr2 71302748 . G . PASS END=71302758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:45:0,80,1507:0,80,255:40,0 chr2 71302759 . G . LowGQ END=71302759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,9:45:0:45:0,0,1128:36,0,255:35,0 chr2 71302760 . A . PASS END=71302772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,101,1395:0,101,255:40,0 chr2 71303734 . G . PASS END=71303765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:24:0,67,870:0,67,255:26,0 chr2 71303766 . A . PASS END=71303770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71303771 . C . PASS END=71303776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:27,0 chr2 71303777 . G . PASS END=71303800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 71303801 . C . PASS END=71303831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:26,0 chr2 71304688 . G . PASS END=71304694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1192:0,83,255:33,0 chr2 71304695 . T . PASS END=71304695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:32,0 chr2 71304696 . C . PASS END=71304709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1197:0,83,255:33,0 chr2 71304710 . G . PASS END=71304710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr2 71304711 . A . PASS END=71304711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 71304712 . C . PASS END=71304712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:35,0 chr2 71304713 . T . PASS END=71304766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:33:0,90,1295:0,95,255:39,0 chr2 71305448 . G . PASS END=71305455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 71305456 . C T, 50.00 PASS DP=24;MQ=215.33;MQRankSum=-1.101;ReadPosRankSum=2.839;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:4,8,0:7,5,0:48:85,0,50,407,393,801:255,0,255:11,0:5.0000e+01,6.6269e-05,5.2775e+01,4.0732e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,8,5:6,5,9,4 chr2 71305457 . T . PASS END=71305469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,992:0,72,255:26,0 chr2 71305470 . G . PASS END=71305470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 71305471 . G . PASS END=71305474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 71305475 . G . PASS END=71305477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71305478 . A . PASS END=71305478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,909:0,45,255:26,0 chr2 71305479 . G . PASS END=71305481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 71305482 . C . PASS END=71305493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:28,0 chr2 71305494 . C . PASS END=71305495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71305496 . T . PASS END=71305504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr2 71305505 . G . PASS END=71305507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71305508 . T . PASS END=71305508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 71305509 . C . PASS END=71305510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71305511 . C . PASS END=71305526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,992:0,78,255:26,0 chr2 71305527 . G . PASS END=71305534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr2 71305535 . C . PASS END=71305587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,68,255:25,0 chr2 71305588 . A . PASS END=71305607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:19,0 chr2 71305608 . C . PASS END=71305608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 71305609 . A . PASS END=71305609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 71305610 . T . PASS END=71305610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 71305611 . T . PASS END=71305611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 71305612 . G . PASS END=71305612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 71305613 . C . PASS END=71305613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:14,0 chr2 71305614 . C . PASS END=71305638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr2 71337036 . T . PASS END=71337036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,255,255:40,0 chr2 71337100 . T . PASS END=71337252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:57:0,120,1800:0,164,255:40,0 chr2 71351336 . C . PASS END=71351339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 71351340 . A . PASS END=71351340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 71351341 . T . PASS END=71351345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 71351346 . A . PASS END=71351346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:25,0 chr2 71351347 . T . PASS END=71351348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 71351349 . T . PASS END=71351354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 71351355 . A . PASS END=71351355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 71351356 . T . PASS END=71351543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1133:0,80,255:40,0 chr2 71351544 . T . PASS END=71351544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1376:0,60,255:38,0 chr2 71351545 . C . PASS END=71351554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,111,1545:0,115,255:40,0 chr2 71351555 . T . PASS END=71351555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1511:0,69,255:36,0 chr2 71351556 . A . PASS END=71351632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:35:0,87,1150:0,87,255:40,0 chr2 71351633 . T . PASS END=71351633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:35:35:0,35,1008:0,35,255:29,0 chr2 71351634 . C . PASS END=71351634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 71351635 . T . PASS END=71351635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:29,0 chr2 71351636 . T . PASS END=71351638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:28,0 chr2 71351639 . T . PASS END=71351639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:25,0 chr2 71351640 . G . PASS END=71351640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 71351641 . T . PASS END=71351641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1038:0,77,255:26,0 chr2 71351642 . T . PASS END=71351647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr2 71351648 . G . PASS END=71351673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:25,0 chr2 71357310 . C . PASS END=71357326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 71357327 . G . PASS END=71357327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 71357328 . C . PASS END=71357329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 71357330 . G . PASS END=71357331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 71357332 . C . PASS END=71357333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr2 71357334 . T . PASS END=71357337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:17,0 chr2 71357338 . C . PASS END=71357338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 71357339 . A . PASS END=71357349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:17,0 chr2 71357385 . G . PASS END=71357385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 71357796 . A . PASS END=71357870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:24,0 chr2 71357871 . G . PASS END=71357882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 71357883 . A . PASS END=71357884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71360028 . G . PASS END=71360106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,109,1540:0,109,255:40,0 chr2 71360107 . A . PASS END=71360143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,167,255:40,0 chr2 71360144 . A C, 244.74 PASS DP=66;MQ=221.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,35,0:0,31,0:195:283,198,0,2491,198,2491:255,198,0:0,0:2.4474e+02,1.9474e+02,0.0000e+00,4.5000e+02,2.2951e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,36:0,0,35,31 chr2 71360145 . A . PASS END=71360181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,171,255:40,0 chr2 71360182 . T . PASS END=71360587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:59:0,120,1800:0,142,255:40,0 chr2 71360588 . T . PASS END=71360624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,3:72:99:66:0,105,1800:0,105,255:40,0 chr2 71360625 . G T, 257.64 PASS DP=72;MQ=192.23;MQRankSum=0.818;ReadPosRankSum=0.962;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,71,0:0.986,0.000:72:1,37,0:0,34,0:208:295,211,0,395,395,395:255,224,0:0,0:2.5764e+02,2.0764e+02,0.0000e+00,3.9241e+02,4.2717e+02,3.9542e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,38,33:0,1,44,27 chr2 71360626 . G . PASS END=71360662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:71:0,120,1800:0,127,255:40,0 chr2 71360663 . C . PASS END=71360684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,139,255:40,0 chr2 71360685 . G . PASS END=71360706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,114,1710:0,157,255:40,0 chr2 71361078 . T . PASS END=71361235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:52:0,120,1800:0,141,255:40,0 chr2 71361756 . G . PASS END=71361927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:50:0,114,1710:0,114,255:40,0 chr2 71365620 . A . PASS END=71365620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,898:0,62,255:23,0 chr2 71365621 . T . PASS END=71365621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:23,0 chr2 71365622 . G . PASS END=71365638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:25,0 chr2 71365639 . C . PASS END=71365651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,901:0,62,255:25,0 chr2 71365652 . G . PASS END=71365652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:23,0 chr2 71365653 . T . PASS END=71365653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 71365654 . T . PASS END=71365659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1000:0,68,255:26,0 chr2 71365660 . A . PASS END=71365661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71365662 . A . PASS END=71365675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,969:0,65,255:25,0 chr2 71365676 . G A, 119.23 PASS DP=24;MQ=247.13;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,15,0:0,9,0:69:157,72,0,915,72,915:255,75,0:0,0:1.1923e+02,6.9227e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,11:0,0,14,10 chr2 71365677 . C . PASS END=71365688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:27,0 chr2 71365689 . G . PASS END=71365713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1003:0,84,255:35,0 chr2 71365714 . A . PASS END=71365910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:84:39:0,84,1393:0,84,255:40,2 chr2 71366925 . C . PASS END=71366991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1194:0,86,255:40,0 chr2 71366992 . G . PASS END=71366992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 71368362 . G . PASS END=71368499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,108,1800:0,108,255:40,0 chr2 71371558 . C . PASS END=71371668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:69:0,120,1800:0,184,255:40,0 chr2 71375129 . C . PASS END=71375236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:41:0,84,1409:0,84,255:40,0 chr2 71376353 . G . PASS END=71376356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1272:0,92,255:34,0 chr2 71376357 . A . PASS END=71376357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:33,0 chr2 71376358 . A . PASS END=71376583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,99,1485:0,99,255:40,0 chr2 71376996 . G . PASS END=71376998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 71376999 . G A, 204.68 PASS DP=55;MQ=250.00;FractionInformativeReads=0.964 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,24,0:0,29,0:155:242,158,0,1928,158,1928:255,165,0:0,0:2.0468e+02,1.5468e+02,0.0000e+00,4.5000e+02,1.8945e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,18:0,0,22,31 chr2 71377000 . A . PASS END=71377036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:57:0,120,1800:0,171,255:40,0 chr2 71377037 . C . PASS END=71377145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:92:0,120,1800:0,221,255:40,0 chr2 71415609 . T . PASS END=71415665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,220,255:40,0 chr2 71416975 . C . PASS END=71416979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1266:0,102,255:34,0 chr2 71416980 . T . PASS END=71416980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1050:0,46,255:31,0 chr2 71416981 . A . PASS END=71417027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:34:0,99,1358:0,102,255:40,0 chr2 71417028 . G . PASS END=71417064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,111,1586:0,111,255:40,0 chr2 71417065 . G T, 42.18 PASS DP=46;MQ=250.00;MQRankSum=5.524;ReadPosRankSum=4.555;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,16,0:0.348,0.000:46:15,9,0:15,7,0:42:77,0,50,572,1036,1608:255,0,255:28,0:4.2178e+01,2.8475e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,8,8:19,11,9,7 chr2 71417066 . G . PASS END=71417102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,102,1566:0,102,255:40,0 chr2 71417103 . C . PASS END=71417134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1174:0,85,255:35,0 chr2 71417135 . T . PASS END=71417135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 71417136 . G . PASS END=71417151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 71429582 . C . PASS END=71429687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:54:0,120,1800:0,146,255:40,1 chr2 71429688 . G . PASS END=71429724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,160,255:40,0 chr2 71429725 . T C, 49.98 PASS DP=57;MQ=250.00;MQRankSum=6.473;ReadPosRankSum=2.131;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,28,0:0.491,0.000:57:19,16,0:10,12,0:48:85,0,50,984,1000,1985:255,0,255:28,0:4.9981e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,14,11,17:13,16,15,13 chr2 71429726 . G . PASS END=71429730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 71453481 . G . PASS END=71453489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1210:0,86,255:33,0 chr2 71453490 . G . PASS END=71453490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:32,0 chr2 71453491 . G . PASS END=71453532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1267:0,97,255:39,0 chr2 71503769 . A . PASS END=71503775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 71503776 . G . PASS END=71503784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 71503785 . T . PASS END=71503785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 71503786 . T . PASS END=71503794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 71503795 . G . PASS END=71503795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 71503796 . A . PASS END=71503796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 71503797 . A . PASS END=71503799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 71503800 . C . PASS END=71503800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 71503801 . C . PASS END=71503818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr2 71503819 . G . PASS END=71503819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 71503820 . G . PASS END=71503836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,454:0,42,255:15,0 chr2 71503837 . G . PASS END=71503837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 71503838 . G . PASS END=71503839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr2 71503840 . T . PASS END=71503840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 71503841 . T . PASS END=71503848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr2 71503849 . T . PASS END=71503849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 71503850 . G . PASS END=71503854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr2 71503855 . G . PASS END=71503855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 71503856 . G . PASS END=71503873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:15,0 chr2 71503874 . T C, 48.69 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=1.002;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,6,0:0.400,0.000:15:5,4,0:4,2,0:47:83,0,50,215,322,537:188,0,255:9,0:4.8689e+01,8.0506e-05,5.3000e+01,2.1461e+02,3.5668e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,2,4:5,4,4,2 chr2 71503875 . C . PASS END=71503884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 71575883 . C . PASS END=71575976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,104,1346:0,104,255:40,0 chr2 71575977 . T . PASS END=71575977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1332:0,73,255:38,0 chr2 71575978 . T . PASS END=71576007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1156:0,84,255:40,0 chr2 71576008 . A . PASS END=71576008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:30,0 chr2 71576009 . G . PASS END=71576150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1149:0,83,255:40,0 chr2 71576151 . T . PASS END=71576151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:67:49:0,67,1656:0,67,255:40,0 chr2 71576152 . C . PASS END=71576377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,104,1574:0,104,255:40,0 chr2 71576378 . G . PASS END=71576378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,9:63:39:63:0,39,1638:0,39,255:40,0 chr2 71576379 . C . PASS END=71577401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,106,1205:0,106,255:40,1 chr2 71582849 . G . PASS END=71582910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:58:0,120,1800:0,144,255:40,0 chr2 71588797 . A . PASS END=71588825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,107,1494:0,107,255:40,0 chr2 71590283 . G . PASS END=71590321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:94:0,120,1800:0,231,255:40,0 chr2 71591084 . A . PASS END=71591377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1062:0,83,255:40,0 chr2 71591378 . A . PASS END=71591379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,83,255:24,0 chr2 71591380 . C . PASS END=71591382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:48:32:0,48,720:0,96,255:18,0 chr2 71592559 . A . PASS END=71592579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,825:0,69,255:25,0 chr2 71592580 . A . PASS END=71592836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:31:0,93,1066:0,93,255:40,0 chr2 71595512 . C . PASS END=71595658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:98:37:0,98,1321:0,98,255:40,0 chr2 71597013 . G . PASS END=71597135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:42:0,120,1800:0,126,255:40,1 chr2 71607352 . A . PASS END=71607410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,221,255:40,0 chr2 71607643 . A . PASS END=71607695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:93:0,120,1800:0,228,255:40,0 chr2 71615753 . A . PASS END=71615753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr2 71615754 . G . PASS END=71615754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 71615755 . T . PASS END=71615769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,862:0,61,255:26,0 chr2 71615770 . C . PASS END=71615777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:31,0 chr2 71615778 . G . PASS END=71615778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 71615779 . G . PASS END=71615801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1149:0,83,255:32,0 chr2 71615802 . A . PASS END=71615802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:29,0 chr2 71615803 . A . PASS END=71615830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 71615831 . A . PASS END=71615831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,930:0,29,255:24,0 chr2 71615832 . A . PASS END=71615839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:25,0 chr2 71615840 . A . PASS END=71615840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,854:0,51,255:22,0 chr2 71615841 . G . PASS END=71615847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,850:0,64,255:24,0 chr2 71615848 . C . PASS END=71615848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:54:26:0,54,810:0,61,255:18,0 chr2 71615849 . A . PASS END=71615849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:17,0 chr2 71615850 . G . PASS END=71615853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:18,0 chr2 71620524 . G . PASS END=71620540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:19,0 chr2 71620541 . G . PASS END=71620564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:25,0 chr2 71620565 . G . PASS END=71620565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 71620566 . G . PASS END=71620576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr2 71620577 . A . PASS END=71620606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1029:0,80,255:32,0 chr2 71620607 . G . PASS END=71620607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:29,0 chr2 71620608 . A . PASS END=71620608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1154:0,83,255:31,0 chr2 71620609 . T . PASS END=71620609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,994:0,49,255:28,0 chr2 71620610 . C . PASS END=71620611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 71620612 . T . PASS END=71620612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:30,0 chr2 71620613 . G . PASS END=71620626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr2 71620627 . T . PASS END=71620627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 71620628 . C . PASS END=71620641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1041:0,87,255:29,0 chr2 71620642 . T . PASS END=71620643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:29:0,77,1108:0,77,255:27,0 chr2 71620644 . C . PASS END=71620645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 71620646 . T . PASS END=71620658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr2 71620713 . A . PASS END=71620714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71620715 . C . PASS END=71620717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 71620718 . G . PASS END=71620719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71620720 . T . PASS END=71620720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 71620721 . C . PASS END=71620721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71620722 . C . PASS END=71620722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 71620723 . A . PASS END=71620723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 71620724 . G . PASS END=71620725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:26,0 chr2 71620726 . C . PASS END=71620726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 71620727 . A . PASS END=71620740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,955:0,65,255:26,0 chr2 71620741 . C . PASS END=71620744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 71620745 . A . PASS END=71620760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,872:0,64,255:26,0 chr2 71620761 . G . PASS END=71620764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,83,255:27,0 chr2 71620765 . T . PASS END=71620765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 71620766 . G . PASS END=71620780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1042:0,90,255:31,0 chr2 71620781 . T . PASS END=71620800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 71620801 . T . PASS END=71620801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:28,0 chr2 71620802 . T . PASS END=71620811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1014:0,93,255:31,0 chr2 71620812 . T . PASS END=71620812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 71620813 . C . PASS END=71620817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1164:0,93,255:33,0 chr2 71620818 . C T, 46.75 PASS DP=33;MQ=250.00;MQRankSum=4.771;ReadPosRankSum=2.413;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,13,0:0.394,0.000:33:8,4,0:12,9,0:46:82,0,50,457,715,1172:255,0,255:17,0:4.6750e+01,1.1364e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,13,3,10:11,9,8,5 chr2 71620819 . C . PASS END=71620835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1216:0,83,255:30,0 chr2 71620836 . G . PASS END=71620836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 71620837 . C . PASS END=71620837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71620838 . T . PASS END=71620851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,68,255:26,0 chr2 71620852 . C . PASS END=71620854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,65,255:19,0 chr2 71620855 . A . PASS END=71620855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr2 71620856 . T . PASS END=71620880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr2 71620881 . C . PASS END=71620881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 71620882 . C . PASS END=71620892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr2 71620893 . G . PASS END=71620904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 71620905 . T . LowGQ END=71620905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,388:35,0,255:11,0 chr2 71620906 . T . PASS END=71620915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 71620916 . T . PASS END=71620916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr2 71620917 . A . PASS END=71620933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 71620934 . G . PASS END=71620949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:9:0,20,315:0,20,255:9,0 chr2 71622377 . G . PASS END=71622403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,138,255:40,0 chr2 71623271 . C . PASS END=71623321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:85:0,120,1800:0,235,255:40,0 chr2 71625831 . G . PASS END=71625902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:57:0,120,1800:0,171,255:40,0 chr2 71626689 . C . PASS END=71626725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,177,255:40,0 chr2 71626726 . G . PASS END=71626775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:60:0,120,1800:0,180,255:40,0 chr2 71627242 . A . PASS END=71627310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:78:0,120,1800:0,218,255:40,0 chr2 71627608 . A . PASS END=71627648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:75:0,120,1800:0,225,255:40,0 chr2 71629086 . G . PASS END=71629217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:65:0,120,1800:0,179,255:40,0 chr2 71631000 . G . PASS END=71631128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,100,1396:0,100,255:40,0 chr2 71632731 . G . PASS END=71632772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:86:0,120,1800:0,237,255:40,1 chr2 71633258 . G . PASS END=71633392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:58:0,120,1800:0,139,255:40,0 chr2 71635252 . G . PASS END=71635377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:44:0,111,1690:0,111,255:40,0 chr2 71645732 . G . PASS END=71645769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:93:0,120,1800:0,228,255:40,0 chr2 71649944 . C . PASS END=71650577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:96:33:0,96,1098:0,99,255:40,0 chr2 71650578 . G . PASS END=71650578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,6:62:72:62:0,72,1771:0,72,255:40,0 chr2 71650579 . A . PASS END=71650579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr2 71650580 . G . PASS END=71650580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,8:60:47:60:0,47,1583:0,47,255:40,0 chr2 71650581 . A . PASS END=71651055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:93:38:0,93,1311:0,96,255:40,0 chr2 71651056 . T . PASS END=71651056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1283:0,79,255:36,0 chr2 71651057 . C . PASS END=71651168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:35:0,85,1189:0,85,255:40,0 chr2 71651780 . A . PASS END=71651845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:79:0,120,1800:0,210,255:40,0 chr2 71653590 . G . PASS END=71653607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:24,0 chr2 71653608 . A . PASS END=71653608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 71653609 . A . PASS END=71653618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:26,0 chr2 71653619 . A . PASS END=71653798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:87:29:0,87,1048:0,87,255:40,0 chr2 71653799 . A . PASS END=71653799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1311:0,73,255:35,0 chr2 71653800 . T . PASS END=71653815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:41:0,107,1480:0,107,255:40,0 chr2 71653816 . A . PASS END=71653816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:35,0 chr2 71653817 . A . PASS END=71653818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,108,1620:0,117,255:37,0 chr2 71653819 . A . PASS END=71653819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1316:0,70,255:34,0 chr2 71653820 . G . PASS END=71654137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:38:0,86,1210:0,86,255:40,0 chr2 71654138 . T . PASS END=71654174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:92:46:0,92,1401:0,92,255:40,0 chr2 71654175 . G A, 50.00 PASS DP=47;MQ=247.89;MQRankSum=5.794;ReadPosRankSum=1.067;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,24,0:0.522,0.000:46:8,14,0:14,10,0:48:85,0,50,842,741,1583:255,0,255:18,0:5.0000e+01,6.6269e-05,5.2802e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,13,11:11,11,9,15 chr2 71654176 . T . PASS END=71654204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,99,255:33,0 chr2 71654205 . G . PASS END=71654206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:30,0 chr2 71654207 . A . PASS END=71654207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 71654208 . G . PASS END=71654211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1213:0,66,255:32,0 chr2 71654212 . A . PASS END=71654212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 71654213 . A . PASS END=71654213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 71654214 . A . PASS END=71654214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr2 71654215 . T . PASS END=71654215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 71654216 . A . PASS END=71654218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:72:37:0,72,1230:0,72,255:37,0 chr2 71654219 . A . PASS END=71654221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:40:0,82,1443:0,82,255:39,0 chr2 71654222 . T . PASS END=71654222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1425:0,68,255:38,0 chr2 71654223 . G . PASS END=71654223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1459:0,84,255:39,0 chr2 71654224 . A . PASS END=71654224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1343:0,65,255:37,0 chr2 71654225 . C . PASS END=71654227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1492:0,90,255:40,0 chr2 71654228 . C . PASS END=71654228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1510:0,74,255:40,0 chr2 71654229 . A . PASS END=71654230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1492:0,90,255:40,0 chr2 71654231 . T . PASS END=71654231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1437:0,74,255:37,0 chr2 71654232 . G . PASS END=71654237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:44:0,93,1489:0,93,255:40,0 chr2 71654238 . C . PASS END=71654238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1598:0,61,255:39,0 chr2 71654239 . A . PASS END=71654544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:85:42:0,85,1411:0,85,255:40,0 chr2 71655677 . C . PASS END=71655781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,4:82:99:59:0,120,1800:0,161,255:40,0 chr2 71658457 . T . PASS END=71658558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:55:0,120,1800:0,148,255:40,0 chr2 71660295 . A . PASS END=71660413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,99,1485:0,111,255:40,0 chr2 71660606 . C . PASS END=71660623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1119:0,90,255:32,0 chr2 71661872 . A . PASS END=71661898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,162,255:40,0 chr2 71661899 . A . PASS END=71661937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,108,1800:0,108,255:40,0 chr2 71680802 . G . PASS END=71680802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 71680851 . G . PASS END=71680851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 71680855 . T . PASS END=71680855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 71680890 . C . PASS END=71680890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 71681122 . G . PASS END=71681122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 71681129 . A . PASS END=71681216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,120,1800:0,125,255:40,0 chr2 71693973 . A . PASS END=71693986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:19,0 chr2 71693987 . G . PASS END=71694003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr2 71694004 . A . PASS END=71694004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 71694005 . C . PASS END=71694038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr2 71694039 . C . PASS END=71694063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr2 71708012 . G . PASS END=71708069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,135,255:40,0 chr2 71709008 . G . PASS END=71709011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:31,0 chr2 71709012 . T . PASS END=71709012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr2 71709013 . T . PASS END=71709019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1233:0,86,255:33,0 chr2 71709020 . G . PASS END=71709020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1227:0,74,255:33,0 chr2 71709021 . G . PASS END=71709024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:35,0 chr2 71709025 . T . PASS END=71709025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 71709026 . C . PASS END=71709033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 71709034 . T . PASS END=71709034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,2 chr2 71709035 . C . PASS END=71709035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1219:0,42,255:35,2 chr2 71709036 . C . PASS END=71709036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:39,0 chr2 71709037 . C . PASS END=71709100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:97:41:0,97,1476:0,97,255:40,0 chr2 71709105 . G . PASS END=71709105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:38:0,93,1395:0,98,255:30,0 chr2 71730338 . T . PASS END=71730339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 71730343 . G . PASS END=71730355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:26,0 chr2 71730356 . A . PASS END=71730403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1047:0,81,255:32,0 chr2 71730404 . C . PASS END=71730446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,767:0,60,255:26,0 chr2 71730447 . G . PASS END=71730449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 71738920 . C . PASS END=71738920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 71738937 . G . PASS END=71738939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:8,0 chr2 71738940 . T . PASS END=71738956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 71738957 . G . PASS END=71738976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr2 71738977 . G A, 50.00 PASS DP=12;MQ=250.00;MQRankSum=2.843;ReadPosRankSum=1.718;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,6,0:0.500,0.000:12:2,2,0:4,4,0:48:85,0,50,207,186,392:189,0,174:6,0:5.0000e+01,6.5233e-05,5.3000e+01,2.0650e+02,2.2069e+02,3.9541e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,3,3:1,5,5,1 chr2 71738978 . A . PASS END=71738984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 71738985 . C . PASS END=71738985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 71738986 . C . PASS END=71738995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 71738996 . G . PASS END=71738996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:11,0 chr2 71738997 . C . PASS END=71739003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 71739004 . C . PASS END=71739004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr2 71739005 . T . PASS END=71739014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,313:0,33,255:11,0 chr2 71739015 . C . PASS END=71739017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 71739018 . T . PASS END=71739018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr2 71739019 . C . PASS END=71739027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr2 71739028 . T . PASS END=71739028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 71739029 . G . PASS END=71739048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 71739049 . C . PASS END=71739052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 71739057 . T . PASS END=71739057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 71740369 . G . PASS END=71740370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 71740371 . C . PASS END=71740374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 71740375 . G . PASS END=71740405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:22,0 chr2 71740406 . T . PASS END=71740406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 71740407 . C . PASS END=71740424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,776:0,66,255:22,0 chr2 71740425 . C . PASS END=71740432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 71740433 . A . PASS END=71740433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71740434 . C . PASS END=71740435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 71740436 . C . PASS END=71740440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 71740441 . A . PASS END=71740462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr2 71740838 . C . PASS END=71740838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 71740846 . A . PASS END=71740853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,978:0,75,255:26,0 chr2 71740854 . G . PASS END=71740875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:33,0 chr2 71740876 . A . PASS END=71740876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 71740877 . G . PASS END=71741012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:35:0,84,1152:0,91,255:40,0 chr2 71741013 . T . PASS END=71741017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1170:0,69,255:28,0 chr2 71741018 . A . PASS END=71741030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 71741031 . G . PASS END=71741031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 71741032 . A . PASS END=71741038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 71741039 . G . PASS END=71741039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr2 71741040 . C . PASS END=71741049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 71741050 . A . PASS END=71741051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 71741052 . G . PASS END=71741052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 71741061 . G . PASS END=71741061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 71742745 . G . PASS END=71742746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr2 71742753 . A . PASS END=71742882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:32:0,81,1215:0,96,255:40,0 chr2 71742883 . T . PASS END=71742883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 71743308 . A . PASS END=71743308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 71743310 . A . PASS END=71743374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,165,255:40,0 chr2 71744117 . A . PASS END=71744117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 71744119 . G . PASS END=71744169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,120,1800:0,120,255:40,0 chr2 71744172 . A . PASS END=71744173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 71747305 . C . PASS END=71747306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,108,1349:0,108,255:38,0 chr2 71747308 . A . PASS END=71747340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:38:0,99,1382:0,107,255:40,0 chr2 71747342 . A . PASS END=71747342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 71747919 . G . PASS END=71747936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,105,1512:0,105,255:40,0 chr2 71747937 . A . PASS END=71748035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,120,1800:0,126,255:40,0 chr2 71748037 . G . PASS END=71748039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 71753307 . G . PASS END=71753307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 71753350 . C . PASS END=71753476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:85:34:0,85,1113:0,85,255:40,0 chr2 71753481 . G . PASS END=71753481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 71753489 . C . PASS END=71753489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 71755426 . A . PASS END=71755426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 71755428 . T . PASS END=71755453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:31:0,80,1185:0,80,255:40,0 chr2 71755454 . A . PASS END=71755454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1481:0,79,255:39,0 chr2 71755455 . A . PASS END=71755476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:41:0,90,1396:0,90,255:40,0 chr2 71755477 . T . PASS END=71755477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1398:0,71,255:38,0 chr2 71755478 . A . PASS END=71755531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1235:0,89,255:40,0 chr2 71755533 . T . PASS END=71755533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 71755537 . G . PASS END=71755537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 71755540 . C . PASS END=71755540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 71762149 . A . PASS END=71762149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1357:0,108,255:36,0 chr2 71762151 . C . PASS END=71762194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1268:0,89,255:37,0 chr2 71762195 . C . PASS END=71762220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1208:0,83,255:33,0 chr2 71762226 . C . PASS END=71762226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 71762392 . C . PASS END=71762392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 71762394 . T . PASS END=71762394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 71762398 . T . PASS END=71762442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:49:0,113,1800:0,113,255:40,0 chr2 71762446 . G . PASS END=71762446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr2 71762454 . T . PASS END=71762454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr2 71766285 . A . PASS END=71766370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,129,255:40,0 chr2 71766387 . T . PASS END=71766387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 71776472 . C . PASS END=71776472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 71776479 . G . PASS END=71776521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:45:0,108,1663:0,108,255:40,0 chr2 71776532 . G . PASS END=71776532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 71778161 . T . PASS END=71778161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:47:0,108,1665:0,108,255:40,0 chr2 71778169 . A . PASS END=71778286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:38:0,90,1350:0,97,255:40,0 chr2 71778288 . T . PASS END=71778288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 71778293 . C . PASS END=71778293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 71778731 . T . PASS END=71778731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 71778735 . A . PASS END=71778735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:29,0 chr2 71778737 . G . PASS END=71778802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:33:0,88,1219:0,88,255:40,0 chr2 71778803 . G . PASS END=71778803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:34,0 chr2 71778804 . A . PASS END=71778818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1239:0,86,255:35,0 chr2 71778819 . A . PASS END=71778819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:27,0 chr2 71778820 . C . PASS END=71778824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 71778825 . C . PASS END=71778825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:27,0 chr2 71778826 . T . PASS END=71778832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 71778833 . G . PASS END=71778834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 71778835 . C . PASS END=71778835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 71778836 . A . PASS END=71778836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 71778837 . T . PASS END=71778839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71778840 . T . PASS END=71778840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 71778841 . C . PASS END=71778842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71778843 . G . PASS END=71778850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,990:0,71,255:26,0 chr2 71778852 . T . PASS END=71778852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,990:0,67,255:21,0 chr2 71780128 . T . PASS END=71780128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 71780131 . C . PASS END=71780131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 71780141 . A . PASS END=71780177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1109:0,80,255:38,0 chr2 71780178 . C . PASS END=71780214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:41:0,105,1397:0,105,255:40,0 chr2 71780215 . T C, 50.00 PASS DP=45;MQ=249.66;MQRankSum=5.234;ReadPosRankSum=3.463;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,23,0:0.511,0.000:45:6,15,0:16,8,0:48:85,0,50,814,771,1586:255,0,255:20,0:5.0000e+01,6.5492e-05,5.2956e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,12,11:13,9,14,9 chr2 71780216 . G . PASS END=71780252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:42:0,92,1128:0,92,255:40,0 chr2 71780253 . A . PASS END=71780290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1305:0,101,255:40,0 chr2 71780291 . A . PASS END=71780305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:23:0,63,945:0,69,255:26,0 chr2 71780306 . G . PASS END=71780318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:19:0,45,675:0,57,255:18,0 chr2 71780922 . G . LowGQ END=71780922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,803:40,0,255:24,0 chr2 71780933 . C . LowGQ END=71780933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,5:30:0:30:0,0,790:59,0,255:25,0 chr2 71780934 . C . PASS END=71780934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,959:0,40,255:25,0 chr2 71780937 . G . LowGQ END=71780937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,800:13,0,255:25,0 chr2 71780938 . G . PASS END=71780938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr2 71780939 . T . PASS END=71780939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,971:0,21,255:27,0 chr2 71780940 . G . PASS END=71780940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71780941 . C . PASS END=71780941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,955:0,35,255:26,0 chr2 71780942 . C . PASS END=71780942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71780943 . A . LowGQ END=71780943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:0:30:0,0,886:18,0,255:27,0 chr2 71780944 . C . PASS END=71780944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:30,0 chr2 71780945 . T . LowGQ END=71780945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,983:6,0,255:28,0 chr2 71780946 . A . PASS END=71780946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 71780947 . C . PASS END=71780947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1238:0,62,255:34,0 chr2 71780948 . T . PASS END=71780948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:3:37:0,3,1149:0,3,255:34,0 chr2 71780949 . A . PASS END=71780949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 71780950 . C . PASS END=71780950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:17:37:0,17,1194:0,17,255:34,0 chr2 71780951 . T . PASS END=71780951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1200:0,39,255:34,0 chr2 71780952 . A . PASS END=71780952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 71780953 . C . PASS END=71780953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1379:0,62,255:37,0 chr2 71780954 . C . PASS END=71780954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 71780955 . T . PASS END=71780955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1341:0,70,255:37,0 chr2 71780956 . A . PASS END=71780956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 71780957 . C . PASS END=71780957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1480:0,52,255:40,0 chr2 71780958 . C . PASS END=71780976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:80:43:0,80,1507:0,80,255:40,0 chr2 71780977 . T . PASS END=71780977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:45:51:0,45,1670:0,45,255:40,0 chr2 71780978 . G . PASS END=71781061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:35:0,90,1350:0,95,255:40,0 chr2 71783095 . G . PASS END=71783112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr2 71783113 . G . PASS END=71783134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 71783135 . A . PASS END=71783135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr2 71783136 . G . PASS END=71783155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,621:0,48,255:17,0 chr2 71783156 . A . PASS END=71783156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 71783157 . C . PASS END=71783195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:18,0 chr2 71783196 . C . PASS END=71783199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 71783200 . A . PASS END=71783200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:12,0 chr2 71783201 . G . PASS END=71783201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 71783204 . A . PASS END=71783204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 71783207 . G . PASS END=71783207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 71788871 . G . PASS END=71788871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 71788880 . A . PASS END=71788888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:24,0 chr2 71788889 . C . PASS END=71788889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 71788890 . T . PASS END=71788892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 71788893 . G . PASS END=71788893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr2 71788894 . T . PASS END=71788895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 71788896 . A . PASS END=71788896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 71788897 . C . PASS END=71788898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr2 71788899 . T . PASS END=71788900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr2 71788901 . C . PASS END=71788901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 71788902 . A . PASS END=71788902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 71788903 . T . PASS END=71788903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 71788904 . G . PASS END=71788906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 71788907 . A . PASS END=71788907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr2 71788908 . C . PASS END=71788914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 71788915 . T . PASS END=71788915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 71788916 . G . PASS END=71788923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1156:0,80,255:29,0 chr2 71788924 . C . PASS END=71788924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:29,0 chr2 71788925 . C . PASS END=71789043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:31:0,81,1208:0,83,255:40,0 chr2 71789044 . G . PASS END=71789071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,61,255:26,0 chr2 71789072 . G . PASS END=71789072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr2 71789073 . A . PASS END=71789074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 71789075 . G . PASS END=71789075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:19,0 chr2 71789088 . G . PASS END=71789088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 71791188 . C . PASS END=71791220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:38:0,97,1276:0,97,255:40,0 chr2 71791221 . A . PASS END=71791221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1316:0,70,255:37,0 chr2 71791222 . T . PASS END=71791296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1281:0,87,255:40,0 chr2 71791297 . A . PASS END=71791297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:34:41:0,34,1122:0,34,255:27,0 chr2 71791298 . C . PASS END=71791316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1215:0,89,255:33,0 chr2 71791317 . G . PASS END=71791331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,900:0,63,255:24,0 chr2 71791332 . A . PASS END=71791332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 71791333 . T . PASS END=71791340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:21,0 chr2 71791341 . A . PASS END=71791342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 71791343 . A . PASS END=71791343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 71795081 . T . PASS END=71795081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1764:0,79,255:40,0 chr2 71795082 . A . PASS END=71795213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,104,1776:0,104,255:40,0 chr2 71795217 . G . PASS END=71795217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 71795300 . A . PASS END=71795300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr2 71795302 . T . PASS END=71795463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:38:0,92,1194:0,92,255:40,0 chr2 71795464 . A . PASS END=71795464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1179:0,78,255:30,0 chr2 71795465 . A . PASS END=71795470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:36:0,93,1297:0,97,255:33,0 chr2 71795473 . G . PASS END=71795473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 71795476 . G . PASS END=71795476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 71796937 . C . PASS END=71796937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 71796948 . A . PASS END=71796948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:35,0 chr2 71796950 . T . PASS END=71796951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1304:0,94,255:36,0 chr2 71796952 . T . PASS END=71796952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:34,0 chr2 71796953 . G . PASS END=71797063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1215:0,87,255:40,0 chr2 71797064 . G . PASS END=71797064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr2 71797344 . C . PASS END=71797345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1364:0,98,255:38,0 chr2 71797358 . G . PASS END=71797466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:36:0,87,1305:0,101,255:40,0 chr2 71797720 . C . PASS END=71797720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 71797729 . G . PASS END=71797732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr2 71797733 . G . PASS END=71797733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr2 71797734 . G . PASS END=71797738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 71797739 . T . PASS END=71797740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:23,0 chr2 71797741 . G . PASS END=71797751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,931:0,64,255:26,0 chr2 71797752 . C . PASS END=71797768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1108:0,84,255:29,0 chr2 71797769 . G . PASS END=71797769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 71797770 . A . PASS END=71797779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 71797780 . T . PASS END=71797780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 71797781 . C . PASS END=71797788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 71797789 . A . PASS END=71797790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 71797791 . A . PASS END=71797791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71797792 . A . PASS END=71797861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,915:0,65,255:26,0 chr2 71797862 . A . PASS END=71797872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:22:0,51,765:0,66,255:19,0 chr2 71797878 . C . PASS END=71797878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 71801323 . T . PASS END=71801323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 71801328 . C . PASS END=71801331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 71801332 . G . PASS END=71801347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:18,0 chr2 71801348 . G . PASS END=71801350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 71801351 . C . PASS END=71801354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 71801355 . G . PASS END=71801386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,917:0,66,255:26,0 chr2 71801387 . G . PASS END=71801398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 71801399 . G . PASS END=71801401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 71801402 . C . PASS END=71801404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71801405 . C . PASS END=71801422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,917:0,64,255:26,0 chr2 71801423 . C . PASS END=71801423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr2 71801424 . C . PASS END=71801425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 71801426 . C . PASS END=71801426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 71801427 . C . PASS END=71801431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 71801432 . C . PASS END=71801432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 71801433 . T . PASS END=71801439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:24,0 chr2 71801440 . G . PASS END=71801451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:28,0 chr2 71801452 . C . PASS END=71801455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 71801456 . G . PASS END=71801471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:27,0 chr2 71801472 . G . PASS END=71801487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,751:0,64,255:26,0 chr2 71801488 . T . PASS END=71801488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr2 71801489 . T . PASS END=71801491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 71801492 . G . PASS END=71801492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 71801493 . G . PASS END=71801494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 71801495 . G . PASS END=71801501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 71801512 . C . PASS END=71801512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 71816713 . G . PASS END=71816713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 71816721 . A . PASS END=71816721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1235:0,88,255:34,0 chr2 71816723 . G . PASS END=71816801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:37:0,90,1382:0,90,255:40,0 chr2 71816802 . C . PASS END=71816802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr2 71816803 . C . PASS END=71816816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1311:0,97,255:38,0 chr2 71816830 . C . PASS END=71816830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 71817308 . A . PASS END=71817308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 71817341 . A . PASS END=71817341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr2 71817342 . T . PASS END=71817342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 71817343 . G . PASS END=71817367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,829:0,65,255:26,0 chr2 71817368 . A . PASS END=71817402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1172:0,83,255:34,0 chr2 71817403 . A . PASS END=71817403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:32,0 chr2 71817404 . A . PASS END=71817404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1213:0,102,255:34,0 chr2 71817405 . G . PASS END=71817405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:32,0 chr2 71817406 . G . PASS END=71817418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:33,0 chr2 71817423 . G . PASS END=71817423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 71825683 . G . PASS END=71825683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 71825693 . G . PASS END=71825697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:24,0 chr2 71825698 . C . PASS END=71825698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 71825699 . T . PASS END=71825705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,886:0,65,255:26,0 chr2 71825706 . T . PASS END=71825713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,881:0,81,255:27,0 chr2 71825714 . T . PASS END=71825714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 71825715 . T . PASS END=71825750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1025:0,84,255:33,0 chr2 71825751 . A . PASS END=71825751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr2 71825752 . C . PASS END=71825826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1178:0,86,255:38,0 chr2 71825827 . T . PASS END=71825827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 71825828 . G . PASS END=71825832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 71825833 . A . PASS END=71825844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,984:0,65,255:26,0 chr2 71825845 . T . PASS END=71825847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,853:0,56,255:19,0 chr2 71825848 . G . PASS END=71825854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 71825855 . C . PASS END=71825863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:19,0 chr2 71825864 . C . PASS END=71825875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:15:0,33,495:0,41,255:13,0 chr2 71825884 . G . PASS END=71825884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 71827830 . A . PASS END=71827830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 71827832 . G . PASS END=71827884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,824:0,61,255:25,0 chr2 71827885 . G . PASS END=71827885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 71827886 . C . PASS END=71827899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:25,0 chr2 71827900 . G . PASS END=71827900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 71827901 . T . PASS END=71827902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 71827903 . C . PASS END=71827903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 71827904 . C . PASS END=71827909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,961:0,75,255:25,0 chr2 71827910 . A . PASS END=71827910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 71827911 . C . PASS END=71827921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 71827922 . C . PASS END=71827922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 71827923 . A . PASS END=71827927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 71827928 . T . PASS END=71827928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 71827929 . C . PASS END=71827943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 71827944 . C . PASS END=71827968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr2 71827969 . G . PASS END=71827973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:13,0 chr2 71828625 . C . PASS END=71828625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr2 71828629 . C . PASS END=71828658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:71:0,120,1800:0,175,255:40,0 chr2 71828668 . G . PASS END=71828668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr2 71829896 . T . PASS END=71829896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 71829906 . G . PASS END=71829914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 71829915 . A . PASS END=71829915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,985:0,73,255:28,0 chr2 71829916 . C . PASS END=71829935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:33,0 chr2 71829937 . T . PASS END=71829937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 71829944 . G . PASS END=71829944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 71838375 . T . PASS END=71838387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:25,0 chr2 71838388 . A . PASS END=71838388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr2 71838389 . C . PASS END=71838391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 71838392 . G . PASS END=71838397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 71838398 . C . PASS END=71838399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 71838400 . C . PASS END=71838403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 71838404 . A . PASS END=71838404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71838405 . C . PASS END=71838408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 71838409 . A . PASS END=71838409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 71838410 . G . PASS END=71838413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 71838414 . G . PASS END=71838414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 71838415 . A . PASS END=71838415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71838416 . G . PASS END=71838416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 71838417 . G . PASS END=71838417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 71838418 . C . PASS END=71838419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 71838420 . A . PASS END=71838424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 71838425 . C . PASS END=71838425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:30,0 chr2 71838426 . T . PASS END=71838471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,978:0,80,255:32,0 chr2 71838472 . T . PASS END=71838476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 71838483 . C . PASS END=71838483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 71838588 . T . PASS END=71838588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 71838595 . A . PASS END=71838596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 71838597 . C A, 49.70 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=3.388;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,14,0:0.467,0.000:30:11,9,0:5,5,0:48:84,0,50,464,543,1007:255,0,255:15,0:4.9703e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,8,6:9,7,5,9 chr2 71838598 . C . PASS END=71838634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1105:0,82,255:36,0 chr2 71838635 . T . PASS END=71838700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:36,0 chr2 71838701 . T . PASS END=71838725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1000:0,78,255:26,0 chr2 71838726 . C . PASS END=71838729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 71838730 . G . PASS END=71838739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 71838740 . C . PASS END=71838757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:19:0,51,765:0,57,255:19,0 chr2 71838760 . A . PASS END=71838760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 71839763 . C . PASS END=71839763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 71839771 . A . PASS END=71839771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71839772 . T . PASS END=71839772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 71839773 . G . PASS END=71839895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:28:0,81,1055:0,81,255:40,0 chr2 71839896 . C . PASS END=71839898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 71839899 . C . PASS END=71839900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 71839901 . A . PASS END=71839904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 71839905 . G . PASS END=71839905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:24,0 chr2 71839906 . G . PASS END=71839922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr2 71839923 . A . PASS END=71839936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:20:0,51,765:0,60,255:19,0 chr2 71839938 . T . PASS END=71839938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr2 71840464 . A . PASS END=71840471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,864:0,75,255:26,0 chr2 71840472 . A . PASS END=71840485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 71840486 . T . PASS END=71840486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 71840487 . G . PASS END=71840515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1119:0,83,255:33,0 chr2 71840516 . C . PASS END=71840516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 71840517 . A . PASS END=71840521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 71840522 . G . PASS END=71840522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 71840523 . C . PASS END=71840526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71840527 . T . PASS END=71840540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:27:0,74,1084:0,74,255:26,0 chr2 71840547 . T . PASS END=71840547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 71847669 . A . PASS END=71847669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 71847676 . G . PASS END=71847739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:55:0,114,1710:0,135,255:40,0 chr2 71871093 . A . PASS END=71871093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 71871095 . G . PASS END=71871194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:41:0,93,1361:0,98,255:40,0 chr2 71883292 . G . PASS END=71883293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 71883294 . C . PASS END=71883312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,978:0,81,255:32,0 chr2 71883313 . A . PASS END=71883313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1077:0,63,255:32,0 chr2 71883314 . A . PASS END=71883416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:34:0,91,1243:0,91,255:40,0 chr2 71883417 . T . PASS END=71883417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr2 71883418 . A . PASS END=71883420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:33,0 chr2 71883426 . T . PASS END=71883426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 71883428 . C . PASS END=71883428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:31,0 chr2 71886008 . G . PASS END=71886008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 71886009 . G . PASS END=71886010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 71886011 . C . PASS END=71886011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 71886012 . T . PASS END=71886019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:22,0 chr2 71886020 . A . PASS END=71886020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 71886021 . T . PASS END=71886022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 71886023 . T . PASS END=71886023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 71886024 . A . PASS END=71886034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:22,0 chr2 71886035 . G . PASS END=71886035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 71886036 . A . PASS END=71886056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:25,0 chr2 71886057 . C . PASS END=71886061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71886062 . A . PASS END=71886062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 71886063 . G . PASS END=71886082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 71886083 . G . PASS END=71886119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 71886120 . T . PASS END=71886131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,674:0,44,255:18,0 chr2 71886132 . T . PASS END=71886133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr2 71886134 . G . PASS END=71886164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 71887690 . T . PASS END=71887774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1155:0,80,255:40,0 chr2 71887775 . T . PASS END=71887775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:29,0 chr2 71887776 . T . PASS END=71887781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 71889030 . G . PASS END=71889030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 71891396 . A . PASS END=71891396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 71891397 . G . PASS END=71891398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 71891399 . A . PASS END=71891399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 71891400 . T . PASS END=71891400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr2 71891401 . G . PASS END=71891414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:25,0 chr2 71891415 . G . PASS END=71891418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71891419 . T . PASS END=71891419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71891420 . C . PASS END=71891428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,1 chr2 71891429 . G . PASS END=71891429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr2 71891430 . A . PASS END=71891444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:33:0,92,1128:0,92,255:35,0 chr2 71891445 . T . PASS END=71891445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:33,0 chr2 71891446 . C . PASS END=71891562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:36:0,87,1305:0,90,255:40,0 chr2 71891563 . C . PASS END=71891570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,70,255:23,0 chr2 71891572 . C . PASS END=71891573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr2 71892292 . C . PASS END=71892387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:36:0,81,1215:0,92,255:40,0 chr2 71892388 . A . PASS END=71892388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr2 71892389 . G . PASS END=71892390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 71892391 . C . PASS END=71892435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,876:0,61,255:26,0 chr2 71894506 . A . PASS END=71894508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,0 chr2 71894509 . C . PASS END=71894509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 71894510 . T . PASS END=71894520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:23,0 chr2 71894521 . C . PASS END=71894522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 71894523 . A . PASS END=71894523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 71894524 . A . PASS END=71894524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:23,0 chr2 71894525 . C . PASS END=71894531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,954:0,75,255:26,0 chr2 71894532 . C . PASS END=71894532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 71894533 . T . PASS END=71894540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,913:0,62,255:25,0 chr2 71894541 . G . PASS END=71894541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 71894542 . T . PASS END=71894542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr2 71894543 . G . PASS END=71894544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 71894545 . A . PASS END=71894545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 71894546 . G . PASS END=71894553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr2 71894554 . T . PASS END=71894554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 71894555 . G . PASS END=71894558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 71894559 . C . PASS END=71894576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1061:0,71,255:26,0 chr2 71894577 . C . PASS END=71894583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr2 71894584 . T . PASS END=71894607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 71894608 . G . PASS END=71894646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 71895867 . G . PASS END=71895867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 71895882 . A . PASS END=71895882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 71895883 . G . PASS END=71895884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 71895885 . G . PASS END=71895892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 71895893 . C . PASS END=71895894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr2 71895895 . G . PASS END=71895896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 71895897 . T . PASS END=71895897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr2 71895898 . G . PASS END=71895905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 71895906 . A . PASS END=71895909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr2 71895910 . A . PASS END=71895910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 71895911 . T . PASS END=71895919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 71895920 . G . PASS END=71895920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr2 71895921 . C . PASS END=71895926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71895927 . G . PASS END=71895927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 71895928 . G . PASS END=71895929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 71895930 . G . PASS END=71895973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1141:0,82,255:31,0 chr2 71895974 . T . PASS END=71895974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 71896238 . C . PASS END=71896238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 71896240 . A . PASS END=71896339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:33:0,86,1255:0,86,255:40,0 chr2 71896723 . A . PASS END=71896723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 71896728 . T . PASS END=71896728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1052:0,93,255:31,0 chr2 71896735 . T . PASS END=71896811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1097:0,81,255:40,0 chr2 71896812 . A . PASS END=71896812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:79:37:0,79,1059:0,79,255:34,0 chr2 71896813 . C . PASS END=71896826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,92,255:34,0 chr2 71896827 . T . PASS END=71896827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:27,1 chr2 71896828 . C . PASS END=71896828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:62:32:0,62,1159:0,62,255:30,1 chr2 71896829 . C . PASS END=71896829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1063:0,41,255:28,0 chr2 71896830 . C . PASS END=71896834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 71896835 . G . PASS END=71896853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr2 71896854 . A . PASS END=71896876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:16,0 chr2 71896877 . G . PASS END=71896877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr2 71896884 . T . PASS END=71896884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 71896886 . C . PASS END=71896886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 71900503 . C . PASS END=71900503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:24,0 chr2 71901319 . C . PASS END=71901320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,156,255:40,0 chr2 71901326 . G . PASS END=71901427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:59:0,120,1800:0,156,255:40,0 chr2 71901432 . C . PASS END=71901432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 71906186 . G . PASS END=71906208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,105,1398:0,108,255:40,0 chr2 71906209 . C . PASS END=71906337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:40:0,81,1215:0,120,255:40,0 chr2 71906338 . A . PASS END=71906366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 71908130 . G . PASS END=71908140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr2 71908141 . A . PASS END=71908179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,950:0,81,255:37,0 chr2 71908180 . A . PASS END=71908180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 71908181 . G . PASS END=71908193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1327:0,95,255:37,0 chr2 71908194 . C . PASS END=71908194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr2 71908195 . A . PASS END=71908207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:35:0,96,1319:0,98,255:35,0 chr2 71908208 . G . PASS END=71908208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:30,0 chr2 71908209 . C . PASS END=71908223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1255:0,86,255:31,0 chr2 71908224 . A . PASS END=71908224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr2 71908225 . A . PASS END=71908228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr2 71908229 . T . PASS END=71908229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:29,0 chr2 71908230 . G . PASS END=71908237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 71908238 . A . PASS END=71908238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 71908239 . A . PASS END=71908240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 71908244 . A . PASS END=71908244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 71909651 . C . PASS END=71909652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 71909658 . A . PASS END=71909658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 71909660 . G . PASS END=71909807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,120,1800:0,120,255:40,0 chr2 71913584 . A . PASS END=71913622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,99,1264:0,101,255:39,0 chr2 71913631 . C . PASS END=71913631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 71913675 . G . PASS END=71913675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 71913697 . C . PASS END=71913697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:25,0 chr2 71913700 . C . PASS END=71913700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 71913729 . T . PASS END=71913729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 71913764 . G . PASS END=71913764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 71913801 . G . PASS END=71913801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 71913867 . T . PASS END=71913867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 71913889 . C . PASS END=71913889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 72160018 . C . PASS END=72160021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr2 72160022 . C . PASS END=72160028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 72160029 . T . PASS END=72160031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 72160032 . G . PASS END=72160039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 72160040 . A . PASS END=72160040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 72160041 . G . PASS END=72160064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr2 72160065 . G . PASS END=72160076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 72160077 . C . PASS END=72160077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 72160078 . C . PASS END=72160128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:25,0 chr2 72160129 . G . PASS END=72160129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 72160130 . G . PASS END=72160141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:25,0 chr2 72160142 . C . PASS END=72160142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:22,0 chr2 72160143 . A . PASS END=72160144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 72160145 . A . PASS END=72160145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:22,0 chr2 72160146 . T . PASS END=72160155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,947:0,72,255:25,0 chr2 72160156 . G . PASS END=72160156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 72160157 . C . PASS END=72160171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 72160172 . C . PASS END=72160172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 72160173 . G . PASS END=72160250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,732:0,62,255:25,0 chr2 72160251 . A . PASS END=72160251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,649:0,16,255:15,0 chr2 72160252 . C . PASS END=72160281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,637:0,41,255:18,0 chr2 72160611 . C . PASS END=72160616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 72160617 . A . PASS END=72160617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 72160618 . G . PASS END=72160620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 72160621 . G . PASS END=72160621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 72160622 . C . PASS END=72160623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 72160624 . G . PASS END=72160624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:24,0 chr2 72160625 . G . PASS END=72160626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 72160627 . T . PASS END=72160627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:24,0 chr2 72160628 . T . PASS END=72160634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:24,0 chr2 72160635 . A . PASS END=72160635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 72160636 . G . PASS END=72160647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,992:0,65,255:26,0 chr2 72160648 . T . PASS END=72160648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 72160649 . A . PASS END=72160649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 72160650 . A . PASS END=72160658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,913:0,81,255:30,0 chr2 72160659 . C . PASS END=72160659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 72160660 . A . PASS END=72160674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1026:0,80,255:32,0 chr2 72160675 . A . PASS END=72160675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1076:0,66,255:30,0 chr2 72160676 . G . PASS END=72160718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1210:0,86,255:32,0 chr2 72160719 . A . PASS END=72160719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 72160720 . C . PASS END=72160725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 72160726 . A . PASS END=72160726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:26,0 chr2 72160727 . A . PASS END=72160730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 72160731 . C . PASS END=72160731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 72160732 . T . PASS END=72160732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 72160733 . T . PASS END=72160756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 72160757 . T . PASS END=72160757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 72160758 . T . PASS END=72160795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1070:0,87,255:29,0 chr2 72160796 . C . PASS END=72160803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,90,255:25,0 chr2 72160804 . G . PASS END=72160804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 72160805 . G . PASS END=72160805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 72160806 . G . PASS END=72160806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 72160807 . T . PASS END=72160807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 72160808 . G . PASS END=72160810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 72160811 . T . PASS END=72160812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 72160813 . G . PASS END=72160815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 72160816 . T . PASS END=72160881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr2 72160882 . C . PASS END=72160882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 72160883 . A . PASS END=72160883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:26,0 chr2 72160884 . G . PASS END=72160885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 72160886 . G . PASS END=72160886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 72160887 . G . PASS END=72160887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 72160888 . G . PASS END=72160888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 72160889 . C . PASS END=72160906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:32,0 chr2 72160907 . G . PASS END=72160907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 72160908 . T . PASS END=72160910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 72160911 . A . PASS END=72160911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1239:0,67,255:32,0 chr2 72160912 . A . PASS END=72160954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1103:0,82,255:33,0 chr2 72160955 . A . PASS END=72160955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:28,0 chr2 72160956 . T . PASS END=72160958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:31,0 chr2 72160959 . T . PASS END=72160959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:31,0 chr2 72160960 . T . PASS END=72160963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:32,0 chr2 72160964 . T . PASS END=72160964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:32,0 chr2 72160965 . C . PASS END=72160994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1148:0,83,255:33,0 chr2 72160995 . T . PASS END=72160995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 72160996 . C . PASS END=72161000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 72161001 . A . PASS END=72161001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1062:0,60,255:28,0 chr2 72161002 . G . PASS END=72161018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1131:0,80,255:30,0 chr2 72161019 . A . PASS END=72161019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 72161020 . A . PASS END=72161025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 72161026 . C . PASS END=72161027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 72161028 . G . PASS END=72161045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1087:0,82,255:31,0 chr2 72161046 . G . PASS END=72161051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 72161052 . G . PASS END=72161071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,997:0,87,255:30,0 chr2 72161072 . C . PASS END=72161073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 72161074 . G . PASS END=72161117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1055:0,84,255:34,0 chr2 72161118 . C . PASS END=72161118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr2 72161119 . T . PASS END=72161294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1180:0,83,255:40,0 chr2 72359356 . T . PASS END=72359362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 72359363 . G . PASS END=72359366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 72359367 . C . PASS END=72359370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 72359371 . C . PASS END=72359382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 72359383 . C . PASS END=72359383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 72359384 . G . PASS END=72359392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr2 72359393 . A . PASS END=72359395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 72359396 . A . PASS END=72359401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 72359402 . T . PASS END=72359402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr2 72359403 . T . PASS END=72359407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 72359408 . T . PASS END=72359408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 72359409 . T . PASS END=72359413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 72359414 . T . PASS END=72359414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 72359415 . C . PASS END=72359426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1100:0,87,255:29,0 chr2 72359427 . A . PASS END=72359427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 72359428 . C . PASS END=72359430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 72359431 . G . PASS END=72359441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 72359442 . C . PASS END=72359449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 72359450 . G . PASS END=72359451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 72359452 . G . PASS END=72359454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 72359455 . C . PASS END=72359455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:29,0 chr2 72359456 . A . PASS END=72359533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1096:0,89,255:35,0 chr2 72359534 . A . PASS END=72359534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 72359535 . G . PASS END=72359544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 72359545 . G . PASS END=72359545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr2 72359546 . A . PASS END=72359549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 72359550 . G . PASS END=72359550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 72359551 . C . PASS END=72359571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1125:0,90,255:30,0 chr2 72359572 . G . PASS END=72359572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:27,0 chr2 72359573 . C . PASS END=72359573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:16:31:0,16,1039:0,16,255:26,0 chr2 72359574 . A . PASS END=72359574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr2 72359575 . G . PASS END=72359586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1170:0,93,255:31,0 chr2 72359587 . G . PASS END=72359587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 72359588 . C . PASS END=72359596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1158:0,96,255:32,0 chr2 72359597 . G . PASS END=72359602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 72359603 . T . PASS END=72359616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 72359617 . A . PASS END=72359617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 72359618 . T . PASS END=72359677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1089:0,80,255:32,0 chr2 72359678 . A . PASS END=72359682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 72359683 . G . PASS END=72359683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:25,0 chr2 72359684 . G . PASS END=72359691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 72359692 . G . PASS END=72359705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 72359706 . G . PASS END=72359720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 72359721 . C . PASS END=72359724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,831:0,55,255:19,0 chr2 72359725 . C . PASS END=72359727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 72359728 . G . PASS END=72359748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 72360152 . A . PASS END=72360176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:9,0 chr2 72360177 . G . PASS END=72360197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 72360198 . G . PASS END=72360198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 72360199 . G . PASS END=72360199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 72360200 . C . PASS END=72360209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,660:0,48,255:19,0 chr2 72360210 . C . PASS END=72360215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 72360216 . A . PASS END=72360226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 72360227 . G . PASS END=72360229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 72360230 . G . PASS END=72360231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 72360232 . A . PASS END=72360233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 72360234 . T . PASS END=72360236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 72360237 . A . PASS END=72360238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 72360239 . G . PASS END=72360239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr2 72360240 . T . PASS END=72360264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,892:0,65,255:26,0 chr2 72360265 . G . PASS END=72360268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr2 72360269 . C . PASS END=72360270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 72360271 . G . PASS END=72360334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1094:0,80,255:31,0 chr2 72360335 . C . PASS END=72360335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 72360336 . T . PASS END=72360343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 72360344 . C . PASS END=72360371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,65,255:26,0 chr2 72360372 . A . PASS END=72360373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,759:0,50,255:19,0 chr2 72360374 . G . PASS END=72360376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 72360377 . T . PASS END=72360404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,714:0,46,255:19,0 chr2 72360405 . T . PASS END=72360405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr2 72360406 . A . PASS END=72360431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr2 72360432 . C . PASS END=72360436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:16:0,30,450:0,32,255:10,0 chr2 72361890 . C . PASS END=72361914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr2 72361915 . T . PASS END=72361945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,531:0,48,255:17,0 chr2 72361946 . G . PASS END=72361951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 72361952 . G . PASS END=72361952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr2 72361953 . G . PASS END=72361989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,825:0,61,255:24,0 chr2 72361990 . T . PASS END=72361990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 72361991 . T . PASS END=72362005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,825:0,69,255:23,0 chr2 72362006 . T . PASS END=72362006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 72362007 . C . PASS END=72362009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 72362010 . C . PASS END=72362010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:20,0 chr2 72362011 . A . PASS END=72362020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 72362021 . G . PASS END=72362043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr2 72362044 . C . PASS END=72362044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 72362045 . C . PASS END=72362045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 72362273 . C . PASS END=72362275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 72362276 . C . PASS END=72362288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:30,0 chr2 72362289 . A . PASS END=72362289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 72362290 . A . PASS END=72362295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1105:0,90,255:32,0 chr2 72362296 . G . PASS END=72362296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr2 72362297 . G . PASS END=72362302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr2 72362303 . A . PASS END=72362303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 72362304 . G . PASS END=72362324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1133:0,93,255:32,0 chr2 72362325 . A . PASS END=72362325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 72362326 . C . PASS END=72362328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1263:0,99,255:33,0 chr2 72362329 . A . PASS END=72362329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,827:0,65,255:30,0 chr2 72362330 . C . PASS END=72362333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 72362334 . T . PASS END=72362334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr2 72362335 . G . PASS END=72362339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 72362340 . A . PASS END=72362340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr2 72362341 . C . PASS END=72362347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 72362348 . G . PASS END=72362379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,953:0,65,255:26,0 chr2 72362380 . A . PASS END=72362380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:21,0 chr2 72362381 . G . PASS END=72362402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:24,0 chr2 72362403 . A . PASS END=72362415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:20:0,50,765:0,50,255:19,0 chr2 72362416 . G . PASS END=72362423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr2 72362424 . G . PASS END=72362441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:20:0,50,765:0,50,255:18,0 chr2 72362442 . A . PASS END=72362442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 72362443 . T . PASS END=72362445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 72362446 . C . PASS END=72362470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,809:0,66,255:23,0 chr2 72362471 . C . PASS END=72362487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:17:0,48,554:0,49,255:17,0 chr2 72362488 . C . PASS END=72362488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 72362489 . C . PASS END=72362496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:18,0 chr2 72362497 . T . PASS END=72362497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,509:0,23,255:17,0 chr2 72362498 . C . PASS END=72362522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,586:0,54,255:18,0 chr2 72362523 . T . PASS END=72362523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 72362524 . C . PASS END=72362532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 72362533 . A . PASS END=72362533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 72362534 . G . PASS END=72362548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,526:0,53,255:18,0 chr2 72371118 . C . PASS END=72371119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr2 72371120 . T . PASS END=72371120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:24,0 chr2 72371121 . G . PASS END=72371121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 72371122 . C . PASS END=72371122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 72371123 . G . PASS END=72371123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 72371124 . C . PASS END=72371124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 72371125 . T . PASS END=72371149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,869:0,64,255:26,0 chr2 72371150 . A . PASS END=72371150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,808:0,45,255:22,0 chr2 72371151 . A . PASS END=72371152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 72371153 . T . PASS END=72371153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:22,0 chr2 72371154 . G . PASS END=72371160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,963:0,78,255:26,0 chr2 72371161 . G . PASS END=72371173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr2 72371174 . G . PASS END=72371175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr2 72371176 . A . PASS END=72371176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr2 72371177 . A . PASS END=72371179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 72371180 . T . PASS END=72371180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:27,0 chr2 72371181 . G . PASS END=72371184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:29,0 chr2 72371185 . G . PASS END=72371185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 72371186 . T . PASS END=72371217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1125:0,80,255:31,0 chr2 72371218 . T . PASS END=72371218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:28,0 chr2 72371219 . G . PASS END=72371362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:33:0,81,1187:0,81,255:40,0 chr2 72371363 . T . LowGQ END=72371363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,8:49:0:49:0,0,1171:0,0,255:39,0 chr2 72371364 . C . PASS END=72371495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:39:0,90,1384:0,90,255:40,0 chr2 72374760 . C . PASS END=72374770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:16,0 chr2 72374771 . A . PASS END=72374771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 72374772 . G . PASS END=72374803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,537:0,48,255:16,0 chr2 72374804 . T . PASS END=72374804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 72374805 . G . PASS END=72374807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 72374808 . T . PASS END=72374809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 72374810 . C . PASS END=72374822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:16,0 chr2 72374823 . C . PASS END=72374824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 72374825 . G . PASS END=72374825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 72374826 . C . PASS END=72374827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 72374828 . T . PASS END=72374829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 72374830 . C . PASS END=72374830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 72374831 . A . PASS END=72374836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 72374837 . T . PASS END=72374837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 72374838 . G . PASS END=72374846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 72374847 . G . PASS END=72374847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 72374848 . G . PASS END=72374848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 72374849 . C . PASS END=72374849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 72374850 . G . PASS END=72374853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr2 72374854 . C . PASS END=72374854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 72374855 . A . PASS END=72374866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 72374867 . A . PASS END=72374867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 72374868 . C . PASS END=72374901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,623:0,51,255:18,0 chr2 72374902 . G . PASS END=72374909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:16:0,35,540:0,35,255:14,0 chr2 72374910 . G . PASS END=72374910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 72374911 . C . PASS END=72374921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 72374922 . G . PASS END=72374922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 72374923 . G . PASS END=72374923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 72374924 . T . PASS END=72374924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr2 72374925 . G . PASS END=72374953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 72374954 . C . PASS END=72374955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 72374956 . A . PASS END=72374958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 72374959 . A . PASS END=72374959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:9,0 chr2 72374960 . G . PASS END=72374961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 72374962 . A . PASS END=72374962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr2 72374963 . T . PASS END=72374963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 72406464 . T . PASS END=72406590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:45:0,93,1395:0,117,255:40,0 chr2 72410019 . T . PASS END=72410034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1759:0,114,255:40,0 chr2 72411204 . T . PASS END=72411316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,102,1301:0,107,255:40,0 chr2 72562076 . T . PASS END=72562149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:99:57:0,115,1800:0,115,255:40,0 chr2 72606858 . G . PASS END=72606999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:31:0,81,1215:0,93,255:40,0 chr2 72665916 . T . PASS END=72665916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 72665917 . T . PASS END=72665953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:44:0,96,1440:0,132,255:40,0 chr2 72665954 . G A, 176.42 PASS DP=43;MQ=249.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,19,0:0,24,0:126:214,129,0,1660,129,1660:255,129,0:0,0:1.7642e+02,1.2642e+02,0.0000e+00,4.5000e+02,1.6119e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,28:0,0,25,18 chr2 72665955 . T . PASS END=72665957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 72691452 . C . PASS END=72691469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,172,255:40,0 chr2 72692223 . T . PASS END=72692229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:42:37:0,42,630:0,81,255:14,0 chr2 72692230 . A . PASS END=72692232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:30:38:0,30,450:0,114,255:11,0 chr2 72692233 . A . PASS END=72692240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:24:37:0,24,360:0,111,255:9,0 chr2 72692241 . A . PASS END=72692256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:12:39:0,12,180:0,107,255:6,0 chr2 72692257 . T . PASS END=72692257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:9:44:0,9,135:0,132,255:3,0 chr2 72692258 . A . PASS END=72692258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:12:48:0,12,180:0,128,255:3,0 chr2 72692259 . T . LowGQ END=72692271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:52,0:52:0:49:0,0,0:0,130,255:2,0 chr2 72692272 . A AAG, 233.59 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,28,0:0,34,0:184:266,187,0,2304,187,2304:255,31,0:0,85:2.3359e+02,1.8359e+02,0.0000e+00,4.5000e+02,2.1836e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,32,30:0,0,32,30 chr2 72692273 . A . LowGQ END=72692273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,55:62:0:62:0,0,0:255,0,19:40,0 chr2 72692274 . G . PASS END=72692274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 72692275 . C . PASS END=72692275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,4:62:62:62:0,62,2055:0,62,255:40,0 chr2 72692276 . A . PASS END=72692276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,5:62:37:62:0,37,2021:0,37,255:40,0 chr2 72692277 . A . PASS END=72692278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:86:61:0,86,1800:0,86,255:40,0 chr2 72692279 . T . PASS END=72692279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:70:62:0,70,2125:0,70,255:40,0 chr2 72692280 . G . PASS END=72692315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:60:0,120,1800:0,123,255:40,0 chr2 72692316 . G . PASS END=72692467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:33:0,81,1260:0,81,255:40,0 chr2 72692468 . C . PASS END=72692468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 72692470 . T . PASS END=72692470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 72707745 . C . PASS END=72707865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:81:46:0,81,1215:0,108,255:40,0 chr2 72707866 . A . PASS END=72707870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:65:40:0,65,1125:0,65,255:26,0 chr2 72707871 . C . PASS END=72707875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:40:0,82,1395:0,82,255:31,0 chr2 72707876 . C . PASS END=72707878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1170:0,69,255:26,0 chr2 72707879 . G . PASS END=72707879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 72719447 . C . PASS END=72719558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,116,1800:0,116,255:40,0 chr2 72722559 . C . PASS END=72722668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:93:0,120,1800:0,238,255:40,0 chr2 72723583 . C . PASS END=72723688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:60:0,120,1800:0,149,255:40,0 chr2 72725583 . C . PASS END=72725680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:92:0,120,1800:0,239,255:40,0 chr2 72727030 . C . PASS END=72727101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:61:0,120,1800:0,183,255:40,0 chr2 72740261 . C . PASS END=72740381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,105,1427:0,105,255:40,0 chr2 72741763 . C . PASS END=72741785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:95:0,120,1800:0,236,255:40,0 chr2 72741786 . C . PASS END=72741809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:104:0,120,1800:0,255,255:40,0 chr2 72742172 . C . PASS END=72742255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:51:0,120,1800:0,137,255:40,0 chr2 72786582 . C . PASS END=72786650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:50:0,120,1800:0,137,255:40,0 chr2 72802621 . C . PASS END=72802797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:55:0,120,1800:0,131,255:40,0 chr2 72945232 . T . PASS END=72945434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:87:35:0,87,1305:0,90,255:40,0 chr2 72945435 . G . PASS END=72945435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:29,0 chr2 72945436 . C . PASS END=72945436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 72958136 . C . PASS END=72958181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:77:0,120,1800:0,205,255:40,0 chr2 72958284 . C . PASS END=72958374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:35:0,87,1305:0,96,255:40,0 chr2 72960200 . T . PASS END=72960247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:77:0,120,1800:0,140,255:40,0 chr2 72968433 . T . PASS END=72968588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:31:0,81,1105:0,93,255:40,0 chr2 72968589 . A . PASS END=72968598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:29:0,72,1080:0,77,255:25,0 chr2 73052927 . C . PASS END=73052927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 73052928 . T . PASS END=73052928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:24,0 chr2 73052929 . G . PASS END=73052929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 73052930 . A . PASS END=73052930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 73052931 . G . PASS END=73052931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 73052932 . C . PASS END=73052932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 73052933 . G . PASS END=73052935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,909:0,75,255:26,0 chr2 73052936 . G . PASS END=73053032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,1031:0,81,255:40,0 chr2 73053033 . G . PASS END=73053039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:25,0 chr2 73114522 . C . PASS END=73114522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 73114558 . G . PASS END=73114558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73114562 . A . PASS END=73114569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 73114570 . C . PASS END=73114570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 73114571 . G . PASS END=73114627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 73114628 . C . PASS END=73114637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 73114638 . T . PASS END=73114638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 73114639 . C . PASS END=73114640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73114641 . T . PASS END=73114642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 73114643 . G . PASS END=73114662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr2 73114663 . C . PASS END=73114669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 73114670 . C . PASS END=73114681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:20,0 chr2 73114682 . G . PASS END=73114731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,651:0,51,255:19,0 chr2 73114732 . G . PASS END=73114740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:17:0,36,540:0,37,255:13,0 chr2 73114741 . C . PASS END=73114746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 73114747 . C . PASS END=73114765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 73114766 . G . PASS END=73114784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,349:0,27,255:9,0 chr2 73114785 . G . PASS END=73114800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 73114801 . C . PASS END=73114801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 73114802 . G . PASS END=73114822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 73114823 . C . PASS END=73114847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 73114848 . T . PASS END=73114865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr2 73115431 . T . PASS END=73115431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:9,0 chr2 73115441 . A . PASS END=73115441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 73115443 . G . PASS END=73115445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr2 73115446 . C . PASS END=73115447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 73115448 . C . PASS END=73115448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 73115449 . T . PASS END=73115450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 73115451 . G . PASS END=73115451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 73115452 . G . PASS END=73115465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,615:0,51,255:19,0 chr2 73115466 . G . PASS END=73115488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,751:0,60,255:24,0 chr2 73115489 . C . PASS END=73115489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 73115490 . A . PASS END=73115498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,941:0,75,255:26,0 chr2 73115499 . A . PASS END=73115501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 73115502 . A . PASS END=73115502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 73115503 . A . PASS END=73115522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1081:0,84,255:31,0 chr2 73115523 . A . PASS END=73115523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 73115524 . C . PASS END=73115707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1118:0,83,255:40,0 chr2 73115708 . T . PASS END=73115708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:33,0 chr2 73115709 . G . PASS END=73115712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1305:0,111,255:32,0 chr2 73115713 . G . PASS END=73115724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:27:0,60,900:0,81,255:24,0 chr2 73115725 . A . PASS END=73115733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,62,255:19,0 chr2 73115740 . G . PASS END=73115740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 73118472 . C . PASS END=73118472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 73118474 . A . PASS END=73118474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:37,0 chr2 73118476 . G . PASS END=73118666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:93:40:0,93,1421:0,93,255:40,0 chr2 73118716 . C . PASS END=73118716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 73118774 . G . PASS END=73118774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 73118899 . G . PASS END=73118899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 73118974 . C . PASS END=73118974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 73118987 . G . PASS END=73118987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 73119043 . G . PASS END=73119043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 73119066 . C . PASS END=73119066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 73119076 . C . PASS END=73119076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 73119241 . G . PASS END=73119241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 73119263 . C . PASS END=73119263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 73119273 . A . PASS END=73119273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73143813 . A . PASS END=73143814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr2 73143815 . G . PASS END=73143845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 73143846 . A . PASS END=73143860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr2 73143861 . G . PASS END=73143953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,258:0,21,255:8,0 chr2 73143954 . C . PASS END=73143960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 73143961 . C . PASS END=73143961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 73143962 . A . PASS END=73143964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 73143965 . C . PASS END=73144014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 73144015 . C . PASS END=73144051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr2 73144052 . C . PASS END=73144056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 73144057 . G . PASS END=73144068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 73144069 . G . PASS END=73144075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 73144076 . C . PASS END=73144077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 73144078 . C . PASS END=73144101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:9,0 chr2 73144102 . T . PASS END=73144102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 73144103 . T . PASS END=73144123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 73144124 . C . PASS END=73144130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:11,0 chr2 73144131 . A . PASS END=73144131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 73144132 . A . PASS END=73144152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,329:0,33,255:11,0 chr2 73144153 . A . PASS END=73144153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 73144154 . G . PASS END=73144169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:10,0 chr2 73144170 . C . PASS END=73144173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73144174 . G . PASS END=73144184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr2 73144185 . C . PASS END=73144185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 73144186 . G . PASS END=73144186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 73144187 . A . PASS END=73144187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 73144188 . T . PASS END=73144193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,333:0,27,255:9,0 chr2 73144982 . A . PASS END=73145037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 73145038 . C . PASS END=73145049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 73145050 . G . PASS END=73145052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 73145053 . G . PASS END=73145061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 73145062 . A . PASS END=73145072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 73145073 . C . PASS END=73145080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 73145081 . A . PASS END=73145105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr2 73145106 . G . PASS END=73145107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 73145108 . T . PASS END=73145108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:7,0 chr2 73145109 . T . PASS END=73145110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73145111 . A . PASS END=73145116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr2 73145117 . G . PASS END=73145180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 73145181 . A . PASS END=73145181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 73145182 . T . PASS END=73145192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 73145193 . C . PASS END=73145193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr2 73145194 . G . PASS END=73145216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr2 73145217 . G . PASS END=73145220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 73145221 . C . PASS END=73145224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 73145225 . G . PASS END=73145265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 73145266 . C . PASS END=73145269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 73145270 . A . PASS END=73145270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 73145271 . G . PASS END=73145309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:18,0 chr2 73145310 . C . PASS END=73145310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr2 73145311 . G . PASS END=73145311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 73145312 . C . PASS END=73145349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:26,0 chr2 73145350 . G . PASS END=73145355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 73145356 . C . PASS END=73145426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,745:0,60,255:26,0 chr2 73145427 . G . PASS END=73145428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 73145429 . G . PASS END=73145432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 73145433 . A . PASS END=73145446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr2 73145447 . C . PASS END=73145447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 73145448 . T . PASS END=73145460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr2 73145461 . C . PASS END=73145461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:17,0 chr2 73145462 . T . PASS END=73145465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 73145466 . T . PASS END=73145466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 73145467 . C . PASS END=73145472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:22,0 chr2 73145473 . G . PASS END=73145473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 73145474 . A . PASS END=73145475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73145476 . C . PASS END=73145487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:19:0,47,737:0,47,255:19,0 chr2 73145488 . C . PASS END=73145488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:16,0 chr2 73145489 . C . PASS END=73145501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:17,0 chr2 73151438 . C . PASS END=73151448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 73151449 . C . PASS END=73151462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 73151463 . G . PASS END=73151468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 73151469 . G . PASS END=73151493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 73151494 . A . PASS END=73151511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:22,0 chr2 73151512 . T . PASS END=73151512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 73151513 . T . PASS END=73151516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 73151517 . G . PASS END=73151517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr2 73151518 . C . PASS END=73151518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 73151519 . C . PASS END=73151519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 73151520 . C . PASS END=73151533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr2 73151534 . G . PASS END=73151592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,659:0,47,255:19,0 chr2 73151593 . G . PASS END=73151593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 73151594 . C . PASS END=73151600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 73151601 . T . PASS END=73151601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:14,0 chr2 73151602 . C . PASS END=73151606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 73151607 . C . PASS END=73151619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 73151620 . C . PASS END=73151620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 73151621 . A . PASS END=73151622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 73152568 . G . PASS END=73152576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:13,0 chr2 73152577 . G . PASS END=73152583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 73152584 . T . PASS END=73152584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 73152585 . G . PASS END=73152614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr2 73152615 . C . PASS END=73152625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 73152626 . G . PASS END=73152629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 73152630 . T . PASS END=73152630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 73152631 . C . PASS END=73152650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 73152651 . G . PASS END=73152658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73152659 . A . PASS END=73152661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73152662 . T . PASS END=73152701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr2 73152702 . C . PASS END=73152705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73160916 . G . PASS END=73161054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1144:0,87,255:40,0 chr2 73161055 . A . PASS END=73161074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:26,0 chr2 73161075 . A . PASS END=73161078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:50:27:0,50,855:0,50,255:19,0 chr2 73161079 . A . PASS END=73161080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr2 73161081 . T . PASS END=73161081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:20,0 chr2 73161082 . A . PASS END=73161083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73172151 . T . PASS END=73172152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 73172153 . A . PASS END=73172153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 73172154 . C . PASS END=73172164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,929:0,62,255:26,0 chr2 73172165 . T . PASS END=73172200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1115:0,80,255:33,0 chr2 73172201 . T . PASS END=73172201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1009:0,63,255:28,0 chr2 73172202 . C . PASS END=73172205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 73172206 . G . PASS END=73172206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 73172207 . G . PASS END=73172208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:29,0 chr2 73172209 . T . PASS END=73172209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr2 73172210 . C . PASS END=73172214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 73172215 . T . PASS END=73172215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 73172216 . G . PASS END=73172220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1111:0,87,255:30,0 chr2 73172221 . G . PASS END=73172221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 73172222 . T . PASS END=73172224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr2 73172225 . C . PASS END=73172225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 73172226 . A . PASS END=73172227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr2 73172228 . T . PASS END=73172228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 73184109 . C . PASS END=73184109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,955:0,43,255:28,0 chr2 73184110 . C . PASS END=73184213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:30:0,82,1081:0,82,255:40,0 chr2 73184214 . T . PASS END=73184214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:77:39:0,77,1099:0,77,255:36,0 chr2 73184215 . T . PASS END=73184228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,95,255:37,0 chr2 73184229 . C . PASS END=73184229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 73184230 . C . PASS END=73184230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 73184231 . T . PASS END=73184232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,108,255:26,0 chr2 73188260 . C . PASS END=73188260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 73188261 . T . PASS END=73188261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 73188262 . C . PASS END=73188269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1000:0,93,255:31,0 chr2 73188270 . T . PASS END=73188270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 73188271 . G . PASS END=73188276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 73188277 . A . PASS END=73188277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 73188278 . G . PASS END=73188283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1158:0,96,255:35,0 chr2 73188284 . G . PASS END=73188284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr2 73188285 . A . PASS END=73188294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1332:0,92,255:34,0 chr2 73188295 . G . PASS END=73188295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 73188296 . C . PASS END=73188341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1263:0,89,255:35,0 chr2 73188342 . A . PASS END=73188342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:30,0 chr2 73188343 . G . PASS END=73188344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 73188345 . A . PASS END=73188356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1170:0,80,255:26,0 chr2 73188357 . C . PASS END=73188358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:27,0 chr2 73188359 . T . PASS END=73188377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr2 73195577 . T . PASS END=73195577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,909:0,21,255:28,0 chr2 73195578 . T . PASS END=73195579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1073:0,82,255:34,0 chr2 73195580 . T . PASS END=73195580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:34,0 chr2 73195581 . C . PASS END=73195581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:56:35:0,56,1175:0,56,255:32,0 chr2 73195582 . C . PASS END=73195630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1197:0,89,255:39,0 chr2 73195631 . A . PASS END=73195631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:29,0 chr2 73195632 . C . PASS END=73195662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:32,0 chr2 73198699 . G . PASS END=73198699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:33,0 chr2 73198700 . T . PASS END=73198700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:33,0 chr2 73198701 . G . PASS END=73198713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1244:0,89,255:36,0 chr2 73198714 . C . PASS END=73198714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr2 73198715 . T . PASS END=73198802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:31:0,87,1258:0,93,255:40,0 chr2 73198803 . T . PASS END=73198803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,962:0,46,255:27,0 chr2 73198804 . A . PASS END=73198804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 73198805 . T . PASS END=73198805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr2 73198806 . T . PASS END=73198814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 73215387 . C . PASS END=73215452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1031:0,81,255:34,0 chr2 73215453 . T . PASS END=73215453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1024:0,54,255:29,0 chr2 73215454 . C . PASS END=73215465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 73215466 . A . PASS END=73215466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73215467 . T . PASS END=73215469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 73215470 . A . PASS END=73215477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr2 73221975 . C . PASS END=73222090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,134,255:40,0 chr2 73226078 . A . PASS END=73226089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:45:0,108,1509:0,108,255:40,0 chr2 73226090 . G A, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.778;ReadPosRankSum=2.690;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,25,0:0.543,0.000:46:10,12,0:11,13,0:47:85,0,46,185,185,185:255,0,255:21,0:5.0000e+01,9.2414e-05,4.9466e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,8,12,13:10,11,19,6 chr2 73226091 . G . PASS END=73226127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,134,255:40,0 chr2 73226128 . T . PASS END=73226143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,137,255:40,0 chr2 73227560 . C . PASS END=73227596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1351:0,97,255:38,0 chr2 73227597 . T . PASS END=73227597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 73227598 . T . PASS END=73227616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:34:0,92,1280:0,92,255:36,0 chr2 73228654 . C . PASS END=73228707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:52:0,120,1800:0,126,255:40,0 chr2 73247368 . A . PASS END=73247393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:98:0,120,1800:0,255,255:40,0 chr2 73249651 . C . PASS END=73249692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:84:50:0,84,1704:0,84,255:40,0 chr2 73249693 . G . PASS END=73249693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1654:0,67,255:40,0 chr2 73249694 . A . PASS END=73249705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:94:46:0,94,1568:0,94,255:40,0 chr2 73250317 . C . PASS END=73250343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,215,255:40,0 chr2 73267983 . C . PASS END=73267986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 73267987 . T . PASS END=73267987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 73267988 . C . PASS END=73267999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 73268000 . C . PASS END=73268000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 73268001 . C . PASS END=73268017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,496:0,42,255:19,0 chr2 73268018 . G . PASS END=73268019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 73268020 . T . PASS END=73268020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 73268021 . T . PASS END=73268021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 73268022 . A . PASS END=73268023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 73268024 . A . PASS END=73268028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 73268029 . T . PASS END=73268030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 73268031 . C . PASS END=73268041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 73268042 . C . PASS END=73268060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 73285657 . C . PASS END=73285714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,105,1499:0,105,255:40,0 chr2 73285715 . T . PASS END=73285725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,111,1582:0,116,255:40,0 chr2 73286137 . C . PASS END=73286148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 73286149 . C . PASS END=73286176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,745:0,60,255:26,0 chr2 73286177 . G . PASS END=73286184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1008:0,78,255:26,0 chr2 73286185 . C . PASS END=73286185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 73286186 . C . PASS END=73286213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 73286214 . T C, 49.59 PASS DP=26;MQ=250.00;MQRankSum=4.295;ReadPosRankSum=2.392;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:5,5,0:9,7,0:48:84,0,50,400,501,901:255,0,255:13,0:4.9589e+01,6.9375e-05,5.3000e+01,4.0034e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,5,7:7,7,6,6 chr2 73286215 . G . PASS END=73286229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 73286230 . A . PASS END=73286230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 73286231 . G . PASS END=73286246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 73286247 . C . PASS END=73286251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:17,0 chr2 73286252 . C . PASS END=73286266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 73286267 . T . PASS END=73286268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73286269 . C . PASS END=73286299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:16:0,41,659:0,41,255:19,0 chr2 73286300 . C . PASS END=73286306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 73286307 . A . PASS END=73286307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73286308 . G . PASS END=73286308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73286309 . G . PASS END=73286313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 73286314 . G . PASS END=73286354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr2 73298733 . C . PASS END=73298743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 73298744 . G . PASS END=73298744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 73298745 . G . PASS END=73298775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:15:0,44,507:0,44,255:19,0 chr2 73298776 . C . PASS END=73298779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 73298780 . A . PASS END=73298790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 73298791 . G . PASS END=73298794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 73298795 . T . PASS END=73298795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 73298796 . A . PASS END=73298796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,2 chr2 73298797 . G . LowGQ END=73298799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,714:0,0,255:20,2 chr2 73298800 . G . PASS END=73298800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr2 73298801 . C . PASS END=73298818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 73298819 . T . PASS END=73298834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr2 73302649 . C . PASS END=73302649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,602:0,60,255:20,0 chr2 73302650 . T . PASS END=73302651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:20:0,49,677:0,49,255:20,0 chr2 73302652 . T . PASS END=73302652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73302653 . T . PASS END=73302653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,626:0,49,255:20,0 chr2 73302654 . T . PASS END=73302654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,576:0,16,255:18,0 chr2 73302655 . G . PASS END=73302656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr2 73302657 . G . PASS END=73302661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:26,0 chr2 73302662 . C . PASS END=73302663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 73302664 . C . PASS END=73302664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:26,0 chr2 73302665 . G . PASS END=73302671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr2 73302672 . T . PASS END=73302672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr2 73302673 . C . PASS END=73302679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:30,0 chr2 73302680 . A . PASS END=73302680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 73302681 . G . PASS END=73302686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr2 73302687 . G . PASS END=73302687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 73302688 . T . PASS END=73302689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 73302690 . A . PASS END=73302690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 73302691 . G . PASS END=73302723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:34,0 chr2 73302724 . G . PASS END=73302724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr2 73302725 . T . PASS END=73302751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1089:0,82,255:32,0 chr2 73302752 . T . PASS END=73302752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:29,0 chr2 73302753 . C . PASS END=73302754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:28,0 chr2 73302755 . C . PASS END=73302756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1057:0,63,255:26,0 chr2 73302757 . C . PASS END=73302757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 73302758 . T . PASS END=73302758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:27,0 chr2 73302759 . G . PASS END=73302760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 73302761 . C . PASS END=73302777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,986:0,77,255:27,0 chr2 73302778 . C . PASS END=73302784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73302785 . A . PASS END=73302785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr2 73302786 . G . PASS END=73302786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 73302787 . C . PASS END=73302791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr2 73302792 . T . PASS END=73302792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr2 73302793 . G . PASS END=73302793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 73302794 . A . PASS END=73302794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:28,0 chr2 73302795 . T . PASS END=73302798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 73302799 . C . PASS END=73302848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,906:0,62,255:25,0 chr2 73302849 . A . PASS END=73302852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 73303121 . C . PASS END=73303121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 73303122 . T . PASS END=73303123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 73303124 . C . PASS END=73303124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:21,0 chr2 73303125 . A . PASS END=73303129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,756:0,66,255:24,0 chr2 73303130 . T . PASS END=73303130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:23,0 chr2 73303131 . T . PASS END=73303131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:23,0 chr2 73303132 . T . PASS END=73303134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:25,0 chr2 73303135 . T . PASS END=73303135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 73303136 . G . PASS END=73303142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 73303143 . A . PASS END=73303144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,792:0,42,255:24,0 chr2 73303145 . C . PASS END=73303145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 73303146 . T . PASS END=73303146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 73303147 . G . PASS END=73303147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 73303148 . G . PASS END=73303148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 73303149 . C . PASS END=73303149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 73303150 . C . PASS END=73303150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,770:0,42,255:22,0 chr2 73303151 . A . PASS END=73303166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,892:0,61,255:26,1 chr2 73303167 . G . PASS END=73303169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 73303170 . A . PASS END=73303170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 73303171 . C . PASS END=73303172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr2 73303173 . G . PASS END=73303173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 73303174 . G . PASS END=73303176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr2 73303177 . G . PASS END=73303177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:29,0 chr2 73303178 . A . PASS END=73303206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1188:0,85,255:32,0 chr2 73303207 . T . PASS END=73303207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:26,0 chr2 73303208 . C . PASS END=73303231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1135:0,82,255:30,0 chr2 73303232 . G . PASS END=73303232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr2 73303233 . C . PASS END=73303237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 73303238 . A . PASS END=73303238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:26,0 chr2 73303239 . C . PASS END=73303239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73303240 . T . PASS END=73303264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr2 73303265 . G . PASS END=73303276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:18,0 chr2 73303277 . A . PASS END=73303277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 73303278 . G . PASS END=73303285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 73303286 . A . PASS END=73303286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 73303287 . C . PASS END=73303310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,521:0,45,255:17,0 chr2 73306779 . C . PASS END=73306779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 73306780 . T . PASS END=73306781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 73306782 . G . PASS END=73306834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,995:0,80,255:32,0 chr2 73306835 . C . PASS END=73306835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:28,0 chr2 73306836 . G . PASS END=73306839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:29,0 chr2 73306840 . A . PASS END=73306880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr2 73306881 . G . PASS END=73306881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 73306882 . G . PASS END=73306909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 73306910 . G . PASS END=73306910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 73306911 . G . PASS END=73306916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 73306917 . G . PASS END=73306948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,714:0,57,255:19,0 chr2 73306949 . G . PASS END=73306950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 73306951 . A . PASS END=73306951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 73306952 . G . PASS END=73306952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 73306953 . G . PASS END=73306960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 73306961 . G . PASS END=73306966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73306967 . G . PASS END=73306976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 73306977 . A . PASS END=73306979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:18,1 chr2 73306980 . G . PASS END=73306990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:18,0 chr2 73306991 . A . PASS END=73306991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 73306992 . G . PASS END=73307000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 73307001 . C . PASS END=73307001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 73307002 . C . PASS END=73307086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,507:0,41,255:17,0 chr2 73307087 . A . PASS END=73307087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 73307088 . T . PASS END=73307088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr2 73307089 . G . PASS END=73307089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 73307090 . A . PASS END=73307090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73307091 . A . PASS END=73307113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr2 73307114 . C . PASS END=73307114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 73307115 . G . PASS END=73307141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,596:0,48,255:16,0 chr2 73307142 . T . PASS END=73307142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 73307143 . C . PASS END=73307155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 73307156 . A . PASS END=73307156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 73307157 . A . PASS END=73307191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,523:0,48,255:16,0 chr2 73307192 . C . PASS END=73307192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 73307193 . C . PASS END=73307220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr2 73307221 . A . PASS END=73307225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 73307226 . G . PASS END=73307238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:18:0,42,630:0,44,255:18,0 chr2 73307239 . C . PASS END=73307259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr2 73307260 . G . PASS END=73307266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 73307267 . A . PASS END=73307275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73307276 . A . PASS END=73307276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 73307277 . G . PASS END=73307280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 73307281 . C . PASS END=73307282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 73307283 . T . PASS END=73307300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:13,0 chr2 73307301 . C . PASS END=73307337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,476:0,42,255:17,0 chr2 73307338 . A . PASS END=73307338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 73307339 . G . PASS END=73307341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 73307342 . A . PASS END=73307376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:14,0 chr2 73307377 . C . PASS END=73307377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 73307378 . G . PASS END=73307393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr2 73307394 . G . PASS END=73307401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:17,0 chr2 73307402 . C . PASS END=73307402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 73307403 . A . PASS END=73307416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,684:0,54,255:19,0 chr2 73307417 . A . PASS END=73307432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr2 73307433 . T . PASS END=73307433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 73307434 . C . PASS END=73307438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 73307439 . C . PASS END=73307439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 73307440 . C . PASS END=73307481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,61,255:26,0 chr2 73307482 . C . PASS END=73307501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,87,255:29,0 chr2 73307502 . C . PASS END=73307502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr2 73307503 . C . PASS END=73307503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 73307504 . C . PASS END=73307505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:29,0 chr2 73307506 . C . PASS END=73307507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:30,0 chr2 73307508 . T . PASS END=73307509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1031:0,71,255:29,0 chr2 73307510 . C . PASS END=73307531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1072:0,80,255:31,0 chr2 73307532 . A . PASS END=73307532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr2 73307533 . C . PASS END=73307538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1186:0,83,255:31,0 chr2 73307539 . C . PASS END=73307539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr2 73307540 . A . PASS END=73307550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 73307551 . C . PASS END=73307551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 73307552 . A . PASS END=73307560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 73307561 . C . PASS END=73307562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr2 73307563 . C . PASS END=73307563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73307564 . T . PASS END=73307564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 73307565 . G . PASS END=73307569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 73307570 . C T, 49.27 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.464;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:5,10,0:10,2,0:48:84,0,50,429,537,966:255,0,255:14,0:4.9274e+01,7.2999e-05,5.3000e+01,4.2909e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,2,10:7,8,4,8 chr2 73307571 . G . PASS END=73307576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr2 73307577 . C . PASS END=73307577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:22,0 chr2 73307578 . T . PASS END=73307584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:23,0 chr2 73307585 . C . PASS END=73307586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:23:0,57,855:0,69,255:19,0 chr2 73307587 . G . PASS END=73307599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:23,0 chr2 73307600 . C . PASS END=73307600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:22,0 chr2 73307601 . T . PASS END=73307607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 73307608 . C . PASS END=73307615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 73307616 . T . PASS END=73307616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 73307617 . C . PASS END=73307618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 73307619 . T . PASS END=73307621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 73307622 . G . PASS END=73307622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 73307623 . A . PASS END=73307623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 73307624 . T . PASS END=73307626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 73307627 . T . PASS END=73307627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:22,0 chr2 73307628 . G . PASS END=73307633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:25,0 chr2 73307634 . G . PASS END=73307636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73307637 . A . PASS END=73307648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 73307649 . G . PASS END=73307653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 73307654 . G . PASS END=73307654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 73307655 . G . PASS END=73307661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 73307662 . G . PASS END=73307680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr2 73307681 . C . PASS END=73307683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 73307684 . G . PASS END=73307717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,930:0,78,255:26,0 chr2 73307718 . G . PASS END=73307721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:27,0 chr2 73307722 . G . PASS END=73307722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr2 73307723 . G . PASS END=73307723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 73307724 . G . PASS END=73307765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,754:0,63,255:25,0 chr2 73307766 . T . PASS END=73307782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 73307783 . A . PASS END=73307783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73307784 . G . PASS END=73307804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,680:0,44,255:19,0 chr2 73307805 . C . PASS END=73307808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 73307809 . A . PASS END=73307818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr2 73307819 . G . PASS END=73307820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 73307821 . C . PASS END=73307880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,568:0,48,255:19,0 chr2 73307881 . C . PASS END=73307883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 73307884 . C . PASS END=73307884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr2 73307885 . G . PASS END=73307921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,648:0,60,255:21,0 chr2 73307922 . T . PASS END=73307922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 73307923 . C . PASS END=73307952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 73307953 . C . PASS END=73307953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 73307954 . C . PASS END=73307959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73307960 . C . PASS END=73307960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 73307961 . C . PASS END=73307961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73307962 . T . PASS END=73307964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 73307965 . C . PASS END=73307971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 73307972 . A . PASS END=73307972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 73307973 . C . PASS END=73307977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73307978 . C . PASS END=73307998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:19:0,46,706:0,46,255:19,0 chr2 73307999 . A . PASS END=73307999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:15,0 chr2 73308000 . G . PASS END=73308011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,637:0,54,255:18,0 chr2 73308012 . T . PASS END=73308012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 73308013 . C . PASS END=73308021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr2 73308022 . T . PASS END=73308022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 73308023 . C . PASS END=73308064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,646:0,44,255:19,0 chr2 73308065 . T . PASS END=73308070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr2 73308071 . G . PASS END=73308071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 73308072 . C . PASS END=73308086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,792:0,66,255:24,0 chr2 73308087 . T . PASS END=73308087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 73308088 . G . PASS END=73308088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 73308089 . T . PASS END=73308089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr2 73308090 . A . PASS END=73308091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 73308092 . C . PASS END=73308093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 73308094 . G . PASS END=73308094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 73308095 . G . PASS END=73308103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 73308104 . G . PASS END=73308106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 73308107 . G . PASS END=73308108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 73308109 . G . PASS END=73308109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 73308110 . C . PASS END=73308139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,62,255:23,0 chr2 73308140 . T . PASS END=73308140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 73308141 . G . PASS END=73308147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 73308148 . C . PASS END=73308148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 73308149 . C . PASS END=73308153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 73308154 . T . PASS END=73308154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 73308155 . C . PASS END=73308176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:23,0 chr2 73308177 . A . PASS END=73308181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 73308182 . C . PASS END=73308182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 73308183 . A . PASS END=73308186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 73308187 . G . PASS END=73308188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 73308189 . A . PASS END=73308197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 73308198 . T . PASS END=73308222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,42,255:19,0 chr2 73308223 . TTCCTCC T, 46.98 PASS DP=22;MQ=250.00;MQRankSum=3.507;ReadPosRankSum=1.395;FractionInformativeReads=0.864;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,7,0:0.368,0.000:19:7,2,0:5,5,0:45:55,0,47,155,155,155:167,0,255:12,7:4.6982e+01,1.3047e-04,5.0000e+01,1.8175e+02,1.8975e+02,1.8476e+02:0.00,8.00,11.01,34.77,42.77,37.78:7,5,2,5:4,8,3,4 chr2 73308224 . T . LowGQ END=73308230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,7:22:0:21:0,0,286:161,0,255:18,7 chr2 73308231 . C . PASS END=73308244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 73308245 . T . PASS END=73308245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:18,0 chr2 73308246 . C . PASS END=73308248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 73308249 . C . PASS END=73308263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr2 73308264 . T . PASS END=73308265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 73308266 . T . PASS END=73308269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 73308270 . T . PASS END=73308274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 73308275 . C . PASS END=73308275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:17,0 chr2 73308276 . T . PASS END=73308282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,644:0,43,255:19,0 chr2 73308283 . C . PASS END=73308284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 73308285 . T . PASS END=73308285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr2 73308286 . T . PASS END=73308292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 73308293 . C . PASS END=73308301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 73308302 . A G, 12.25 PASS DP=20;MQ=250.00;MQRankSum=3.423;ReadPosRankSum=0.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,6,0:0.300,0.000:20:7,1,0:7,5,0:12:47,0,50,183,492,675:150,0,255:12,0:1.2251e+01,2.6669e-01,5.3267e+01,1.8353e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,0,6:5,9,5,1 chr2 73308303 . G . PASS END=73308305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:16,0 chr2 73308306 . C . PASS END=73308307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:15:18:0,15,612:0,15,255:16,0 chr2 73308308 . T . PASS END=73308314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 73308315 . T . PASS END=73308315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 73308316 . G . PASS END=73308328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr2 73308329 . C . PASS END=73308329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73308330 . T . PASS END=73308330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 73308331 . C . PASS END=73308339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 73308340 . C . PASS END=73308367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 73308368 . G . PASS END=73308369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 73308370 . C . PASS END=73308391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:11,0 chr2 73308392 . A . PASS END=73308392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 73308393 . G . PASS END=73308413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr2 73308414 . T . PASS END=73308421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73308422 . A . PASS END=73308433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr2 73308434 . C . PASS END=73308434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 73308435 . C . PASS END=73308448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 73308449 . G . PASS END=73308458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 73308459 . C . PASS END=73308469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 73308470 . G . PASS END=73308470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73308471 . G . PASS END=73308495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 73308496 . A . PASS END=73308500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73308501 . G . PASS END=73308520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 73308521 . T . PASS END=73308521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 73308522 . A . PASS END=73308534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 73308535 . A . PASS END=73308535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:9,0 chr2 73308536 . G . PASS END=73308536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 73308537 . A . PASS END=73308544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 73308545 . G . PASS END=73308545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 73308546 . C . PASS END=73308553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 73308554 . A . PASS END=73308554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:11,0 chr2 73308555 . G . PASS END=73308561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr2 73308562 . G . PASS END=73308562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 73308563 . G . PASS END=73308594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:12,0 chr2 73308595 . G . PASS END=73308595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 73308596 . G . PASS END=73308597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 73308598 . T . PASS END=73308600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 73308601 . C . PASS END=73308630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,360:0,33,255:13,0 chr2 73308631 . C . PASS END=73308631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 73308632 . A . PASS END=73308634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 73308635 . A . PASS END=73308635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:11,0 chr2 73308636 . G . PASS END=73308642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 73308643 . C . PASS END=73308651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 73308652 . A . PASS END=73308652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 73308653 . G . PASS END=73308668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 73308669 . T . PASS END=73308669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 73308670 . T . PASS END=73308675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 73308676 . T . PASS END=73308676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 73308677 . T . PASS END=73308696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr2 73308697 . G . PASS END=73308718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,743:0,60,255:26,0 chr2 73308719 . A . PASS END=73308756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1133:0,84,255:30,0 chr2 73308757 . C . PASS END=73308791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,914:0,72,255:25,0 chr2 73315178 . C . PASS END=73315276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,578:0,48,255:19,0 chr2 73315277 . A . PASS END=73315281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 73315282 . A . PASS END=73315303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,743:0,47,255:19,0 chr2 73315304 . C . PASS END=73315310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:23,0 chr2 73315311 . G . PASS END=73315311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 73315312 . A . PASS END=73315319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,955:0,75,255:26,0 chr2 73315320 . C . PASS END=73315372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,972:0,80,255:31,0 chr2 73315373 . C . PASS END=73315373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr2 73315374 . G . PASS END=73315378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:31,0 chr2 73315379 . T . PASS END=73315379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 73315380 . C . PASS END=73315406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 73315407 . C . PASS END=73315450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 73315451 . T . PASS END=73315455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr2 73315456 . C . PASS END=73315458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73315459 . T . PASS END=73315553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,630:0,40,255:19,0 chr2 73315554 . C . PASS END=73315559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73315560 . T . PASS END=73315560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 73315561 . G . PASS END=73315563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 73315564 . G . PASS END=73315571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:21:0,49,745:0,49,255:19,0 chr2 73315572 . G . PASS END=73315572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73315573 . A . PASS END=73315573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 73315574 . C . PASS END=73315596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,869:0,63,255:26,0 chr2 73315597 . T . PASS END=73315600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 73315601 . G . PASS END=73315601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr2 73315602 . A . PASS END=73315604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 73315605 . G . PASS END=73315613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 73315614 . C . PASS END=73315618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 73315619 . G . PASS END=73315626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,886:0,64,255:26,0 chr2 73315627 . G . PASS END=73315635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 73315636 . A . PASS END=73315637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 73315638 . C . PASS END=73315642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73315643 . A . PASS END=73315645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73315646 . G . PASS END=73315650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 73315651 . A . PASS END=73315651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 73315652 . G . PASS END=73315671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1157:0,90,255:31,0 chr2 73315672 . G . PASS END=73315673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:28,0 chr2 73315674 . T . PASS END=73315674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 73315675 . G . PASS END=73315675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 73315676 . G . PASS END=73315678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 73315679 . C . PASS END=73315679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73315680 . T . PASS END=73315680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73315681 . G . PASS END=73315683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 73315684 . G . PASS END=73315684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 73315685 . T . PASS END=73315688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 73315689 . G . PASS END=73315692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 73315693 . A . PASS END=73315693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 73315694 . G . PASS END=73315704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 73315705 . C . PASS END=73315711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73315712 . T . PASS END=73315724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:28,0 chr2 73315725 . T . PASS END=73315727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73315728 . C . PASS END=73315729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 73315730 . T . PASS END=73315738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr2 73315739 . A . PASS END=73315771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1163:0,80,255:31,0 chr2 73315772 . T . PASS END=73315776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 73315777 . G . PASS END=73315782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 73315783 . A . PASS END=73315783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:26,0 chr2 73315784 . A . PASS END=73315798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr2 73315799 . G . PASS END=73315799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:29,0 chr2 73315800 . C . PASS END=73315803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 73315804 . T . PASS END=73315804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 73315805 . C . PASS END=73315860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1196:0,87,255:32,0 chr2 73315861 . C . PASS END=73315861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr2 73315862 . T . PASS END=73315862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr2 73315863 . G . PASS END=73315865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 73315866 . C . PASS END=73315877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:19:0,45,675:0,57,255:18,0 chr2 73316007 . C . PASS END=73316009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 73316010 . C . PASS END=73316032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1001:0,84,255:29,0 chr2 73316033 . C . PASS END=73316033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 73316034 . G . PASS END=73316068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1163:0,90,255:31,0 chr2 73316069 . C . PASS END=73316069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 73316070 . C . PASS END=73316095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1035:0,80,255:29,0 chr2 73316096 . G . PASS END=73316108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1062:0,74,255:26,0 chr2 73316109 . T . PASS END=73316109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:24,0 chr2 73316110 . G . PASS END=73316121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,930:0,62,255:25,0 chr2 73316122 . C . PASS END=73316123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr2 73316124 . A . PASS END=73316125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 73316126 . G . PASS END=73316147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr2 73316148 . A . PASS END=73316148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 73316149 . C . PASS END=73316149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 73316150 . T . PASS END=73316150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr2 73316151 . T . PASS END=73316154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73316155 . C . PASS END=73316155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr2 73316156 . A . PASS END=73316159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 73316160 . T . PASS END=73316160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 73316161 . G . PASS END=73316184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,814:0,63,255:24,0 chr2 73316185 . T . PASS END=73316185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 73316186 . T . PASS END=73316191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 73316192 . A . PASS END=73316192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73316193 . T . PASS END=73316201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1070:0,74,255:25,0 chr2 73316202 . G . PASS END=73316204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,970:0,45,255:25,0 chr2 73316205 . T . PASS END=73316205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr2 73316206 . G . PASS END=73316208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 73316209 . C . PASS END=73316216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:26,0 chr2 73316217 . G . PASS END=73316231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73316232 . T . PASS END=73316232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 73316233 . G . PASS END=73316233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 73316234 . C . PASS END=73316234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 73316235 . T . PASS END=73316238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 73316239 . G . PASS END=73316239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:28,0 chr2 73316240 . A . PASS END=73316265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1139:0,80,255:31,0 chr2 73316266 . A . PASS END=73316266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:28,0 chr2 73316267 . T . PASS END=73316277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 73316278 . G . PASS END=73316278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 73316279 . C . PASS END=73316281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 73316282 . T . PASS END=73316282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:29,0 chr2 73316283 . T . PASS END=73316440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:32:0,89,1201:0,89,255:40,0 chr2 73316441 . C . PASS END=73316443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,89,255:26,0 chr2 73338374 . C . PASS END=73338411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,131,255:40,0 chr2 73339475 . T . PASS END=73339499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:11,0 chr2 73339500 . C . PASS END=73339500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 73339501 . G . PASS END=73339575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,382:0,33,255:13,0 chr2 73339576 . G . PASS END=73339577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 73339578 . G . PASS END=73339586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 73339587 . C . PASS END=73339605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 73339606 . C . PASS END=73339613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr2 73339614 . A . PASS END=73339623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 73339624 . G . PASS END=73339624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 73339625 . C . PASS END=73339630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr2 73339631 . T . PASS END=73339647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr2 73339648 . C . PASS END=73339670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr2 73339671 . G . PASS END=73339702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,590:0,41,255:19,0 chr2 73339703 . T . PASS END=73339705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 73339706 . G . PASS END=73339707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 73339708 . G A, 50.00 PASS DP=18;MQ=249.56;MQRankSum=3.442;ReadPosRankSum=3.079;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,11,0:0.611,0.000:18:3,3,0:4,8,0:47:85,0,48,385,250,635:255,0,214:4,0:5.0000e+01,7.7400e-05,5.1055e+01,3.8540e+02,2.8476e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,8,3:3,4,4,7 chr2 73339709 . C . PASS END=73339715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,590:0,48,255:16,0 chr2 73339716 . G . PASS END=73339717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 73339718 . G . PASS END=73339726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,544:0,48,255:17,0 chr2 73339727 . A . PASS END=73339727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:16,0 chr2 73339728 . C . PASS END=73339745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,584:0,51,255:18,0 chr2 73339746 . T . PASS END=73339753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:17,0 chr2 73339754 . C . PASS END=73339754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 73339755 . C . PASS END=73339771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 73339772 . T . PASS END=73339772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 73339773 . A . PASS END=73339815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,662:0,44,255:19,0 chr2 73339816 . C . PASS END=73339816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr2 73339817 . C . PASS END=73339837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 73339838 . A . PASS END=73339839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 73339840 . C . PASS END=73339840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 73339841 . T . PASS END=73339841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 73339842 . G . PASS END=73339845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 73339846 . G . PASS END=73339847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 73339848 . G . PASS END=73339857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr2 73339858 . C . PASS END=73339858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 73339859 . C . PASS END=73339859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 73339860 . A . PASS END=73339860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 73339861 . G . PASS END=73339864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 73339865 . G . PASS END=73339865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 73339866 . A . PASS END=73339890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:17,0 chr2 73339891 . C . PASS END=73339905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr2 73429795 . A . PASS END=73429795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 73429796 . T . PASS END=73429802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,886:0,62,255:29,0 chr2 73429803 . C . PASS END=73429807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 73429808 . G C, 45.50 PASS DP=30;MQ=250.00;MQRankSum=4.476;ReadPosRankSum=0.904;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,11,0:0.367,0.000:30:11,6,0:8,5,0:45:80,0,50,385,651,1036:255,0,255:19,0:4.5498e+01,1.4419e-04,5.3000e+01,3.8542e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,6,5,6:7,12,6,5 chr2 73429809 . G . PASS END=73429816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1127:0,90,255:31,0 chr2 73429817 . G . PASS END=73429817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 73429818 . C . PASS END=73429845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1170:0,93,255:40,0 chr2 73429846 . C . PASS END=73429905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,108,1605:0,108,255:40,0 chr2 73429906 . A . PASS END=73429906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1656:0,70,255:40,0 chr2 73429907 . C . PASS END=73430014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:30:0,81,1135:0,83,255:40,0 chr2 73430015 . T . PASS END=73430032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,978:0,67,255:26,0 chr2 73430033 . C . PASS END=73430033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:22,0 chr2 73430034 . C . PASS END=73430060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr2 73430061 . T . PASS END=73430082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,637:0,40,255:19,0 chr2 73430083 . T . PASS END=73430083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 73430084 . C . PASS END=73430095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 73430096 . C . PASS END=73430096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr2 73430097 . C . PASS END=73430097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 73430098 . T . PASS END=73430098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 73430099 . A . PASS END=73430109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,568:0,51,255:17,0 chr2 73430110 . G . PASS END=73430111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 73430112 . T . PASS END=73430120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,630:0,40,255:15,0 chr2 73430121 . T . PASS END=73430122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 73430123 . T . PASS END=73430123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:11,0 chr2 73430124 . G . PASS END=73430138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,31,255:12,0 chr2 73430139 . G . LowGQ END=73430139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr2 73430140 . G . PASS END=73430162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 73430163 . C . PASS END=73430164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,332:0,14,255:9,0 chr2 73430165 . T . PASS END=73430176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 73435528 . G . PASS END=73435538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 73435539 . G . PASS END=73435539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 73435540 . C . PASS END=73435540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 73435541 . T . PASS END=73435541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 73435542 . C . PASS END=73435550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr2 73435551 . G . PASS END=73435551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 73435552 . G . PASS END=73435562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr2 73435563 . T . PASS END=73435584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr2 73435585 . A . PASS END=73435703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:29:0,81,1026:0,84,255:40,0 chr2 73435704 . G . PASS END=73435704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:30,0 chr2 73435705 . C . PASS END=73435725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:33,0 chr2 73435726 . A . PASS END=73435738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:29:0,63,1122:0,63,255:26,0 chr2 73435739 . C . PASS END=73435739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73435740 . C . PASS END=73435742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73437899 . G . PASS END=73437905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 73437906 . T . PASS END=73437906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 73437907 . C . PASS END=73437914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 73437915 . A . PASS END=73437915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 73437916 . G . PASS END=73437925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:19,0 chr2 73437926 . G . PASS END=73437929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 73437930 . A . PASS END=73437930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:20,0 chr2 73437931 . G . PASS END=73437931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr2 73437932 . T . PASS END=73437932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 73437933 . A . PASS END=73437947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:24,0 chr2 73437948 . A . PASS END=73437948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 73437949 . G . PASS END=73437959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr2 73437960 . C . PASS END=73438011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1305:0,90,255:39,0 chr2 73438012 . C . PASS END=73438012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:38,0 chr2 73438013 . G . PASS END=73438047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1208:0,83,255:39,0 chr2 73438048 . G . PASS END=73438050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 73438051 . C . PASS END=73438057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 73441395 . A . PASS END=73441398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,668:0,60,255:20,0 chr2 73441399 . C . PASS END=73441399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:19,0 chr2 73441400 . G . PASS END=73441403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr2 73441404 . T . PASS END=73441404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 73441405 . C . PASS END=73441406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr2 73441407 . A . PASS END=73441407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr2 73441408 . T . PASS END=73441413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,894:0,62,255:26,0 chr2 73441414 . A . PASS END=73441415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 73441416 . G . PASS END=73441416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 73441417 . T . PASS END=73441417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 73441418 . G . PASS END=73441418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 73441419 . T . PASS END=73441423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1009:0,87,255:29,0 chr2 73441424 . C . PASS END=73441424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 73441425 . T . PASS END=73441425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 73441426 . T . PASS END=73441426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 73441427 . C . PASS END=73441455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1150:0,83,255:32,0 chr2 73441456 . T . PASS END=73441456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:27,0 chr2 73441457 . C . PASS END=73441459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1186:0,83,255:29,0 chr2 73441460 . C . PASS END=73441460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 73441461 . G . PASS END=73441465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1169:0,80,255:30,0 chr2 73441466 . A . PASS END=73441466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:28,0 chr2 73441467 . G . PASS END=73441468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1140:0,93,255:31,0 chr2 73441469 . C . PASS END=73441470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:30,0 chr2 73441471 . G . PASS END=73441473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 73441474 . T . PASS END=73441474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:28,0 chr2 73441475 . C . PASS END=73441487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 73441488 . A . PASS END=73441490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,92,255:26,0 chr2 73441863 . A . PASS END=73441877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,860:0,61,255:26,0 chr2 73445857 . A . PASS END=73445868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 73445869 . A . PASS END=73445869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 73445870 . G . PASS END=73445877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73445878 . C . PASS END=73445901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,566:0,45,255:19,0 chr2 73445902 . G . PASS END=73445906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 73445907 . G . PASS END=73445907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 73445908 . A . PASS END=73445922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:23,0 chr2 73445923 . C . PASS END=73445923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 73445924 . T . PASS END=73445967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,861:0,65,255:29,0 chr2 73445968 . C . PASS END=73445978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:31,0 chr2 73445979 . G . PASS END=73445979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:29,0 chr2 73445980 . C . PASS END=73445992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1086:0,83,255:31,0 chr2 73445993 . A . PASS END=73445993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:29,0 chr2 73445994 . G . PASS END=73446014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1072:0,83,255:31,0 chr2 73446015 . C . PASS END=73446015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 73446016 . A . PASS END=73446017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 73446018 . C . PASS END=73446018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr2 73446019 . C . PASS END=73446026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1141:0,90,255:30,0 chr2 73446027 . G . PASS END=73446031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 73446032 . C . PASS END=73446034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 73446035 . T . PASS END=73446068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr2 73446069 . T . PASS END=73446097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,47,255:19,0 chr2 73447080 . A . PASS END=73447082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 73447083 . G . PASS END=73447083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 73447084 . G . PASS END=73447102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,795:0,69,255:23,0 chr2 73447103 . T . PASS END=73447103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 73447104 . G . PASS END=73447106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 73447107 . C . PASS END=73447109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1233:0,86,255:30,0 chr2 73447110 . T . PASS END=73447110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:30,0 chr2 73447111 . A . PASS END=73447120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1216:0,83,255:30,0 chr2 73447130 . A . PASS END=73447318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:88:45:0,88,1582:0,88,255:40,0 chr2 73447789 . G . PASS END=73447790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 73447791 . G . PASS END=73447791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:28,0 chr2 73447792 . A . PASS END=73447793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 73447794 . G . PASS END=73447794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr2 73447795 . T . PASS END=73447799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1231:0,86,255:31,0 chr2 73447800 . C . PASS END=73447800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:32,0 chr2 73447801 . A . PASS END=73447812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1395:0,102,255:37,0 chr2 73447813 . C . PASS END=73447865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:92:34:0,92,1280:0,92,255:39,0 chr2 73447866 . G . PASS END=73447868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:66:35:0,66,1222:0,66,255:31,0 chr2 73447869 . T . PASS END=73447873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:32,0 chr2 73447874 . C . PASS END=73447874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:27,0 chr2 73447875 . C . PASS END=73447889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1156:0,83,255:30,0 chr2 73447890 . T . PASS END=73447890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1078:0,62,255:27,0 chr2 73447891 . A . PASS END=73447892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr2 73447893 . G . PASS END=73447893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr2 73447894 . C . PASS END=73447897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 73447898 . A . PASS END=73447910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 73448293 . G . PASS END=73448362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,108,1498:0,114,255:40,0 chr2 73448954 . G . PASS END=73449058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,107,1800:0,107,255:40,0 chr2 73449883 . G . PASS END=73449942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,620:0,62,255:24,0 chr2 73449943 . C . PASS END=73449943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 73449944 . A . PASS END=73449945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 73450164 . T . PASS END=73450176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,152,255:40,0 chr2 73450177 . A . PASS END=73450234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:97:56:0,97,1800:0,97,255:40,0 chr2 73450554 . C . PASS END=73450660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1215:0,87,255:40,0 chr2 73451075 . C . PASS END=73451131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:73:0,120,1800:0,203,255:40,0 chr2 73451994 . G . PASS END=73452088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:44:0,120,1800:0,132,255:40,0 chr2 73452759 . G . PASS END=73452760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1332:0,92,255:34,0 chr2 73452761 . A . PASS END=73452761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:33,0 chr2 73452762 . A . PASS END=73452825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:88:35:0,88,1156:0,88,255:38,0 chr2 73452826 . T . PASS END=73452826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1237:0,77,255:32,0 chr2 73452827 . C . PASS END=73452829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr2 73452924 . G . PASS END=73453074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:50:0,120,1800:0,121,255:40,2 chr2 73455582 . C . PASS END=73455702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:42:0,116,1560:0,116,255:40,0 chr2 73455923 . C . PASS END=73455923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 73455924 . C . PASS END=73455928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73455929 . C . PASS END=73455929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 73455930 . G . PASS END=73455945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:26,0 chr2 73455946 . G . PASS END=73455947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73455948 . C . PASS END=73455958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 73455959 . G . PASS END=73455991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1063:0,84,255:35,0 chr2 73455992 . A . PASS END=73455992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:34,0 chr2 73455993 . C . PASS END=73456048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1128:0,88,255:35,0 chr2 73456049 . T . PASS END=73456067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr2 73456068 . T . PASS END=73456068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr2 73456069 . C . PASS END=73456084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr2 73456085 . C . PASS END=73456090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 73456589 . C . PASS END=73456591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 73456592 . C . PASS END=73456597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73456598 . A . PASS END=73456598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 73456599 . C . PASS END=73456607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:24,0 chr2 73456608 . T . PASS END=73456608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr2 73456609 . C . PASS END=73456624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 73456625 . A . PASS END=73456625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 73456626 . A . PASS END=73456626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 73456627 . A . PASS END=73456627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 73456628 . C . PASS END=73456631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 73456632 . T . PASS END=73456632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 73456633 . G . PASS END=73456649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr2 73456650 . C . PASS END=73456658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1003:0,87,255:29,0 chr2 73456659 . G . PASS END=73456659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 73456660 . T . PASS END=73456669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 73456670 . A . PASS END=73456698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 73457241 . A . PASS END=73457341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,121,255:40,0 chr2 73460222 . C . PASS END=73460236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,894:0,72,255:25,0 chr2 73460237 . A . PASS END=73460237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr2 73460238 . C . PASS END=73460243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 73460244 . G . PASS END=73460244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 73460245 . A . PASS END=73460245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:22,0 chr2 73460246 . G . PASS END=73460246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 73460247 . C . PASS END=73460247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:21,0 chr2 73460248 . C . PASS END=73460248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 73460249 . A . PASS END=73460249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,835:0,42,255:21,0 chr2 73460250 . G . PASS END=73460250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:22,0 chr2 73460251 . A . PASS END=73460251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:21,0 chr2 73460252 . G . PASS END=73460252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 73460253 . C . PASS END=73460253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:20,0 chr2 73460254 . A . PASS END=73460256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:21,0 chr2 73460257 . A . PASS END=73460257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:21,0 chr2 73460258 . G . PASS END=73460260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:21,0 chr2 73460261 . A . PASS END=73460266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:56:22:0,56,855:0,56,255:19,0 chr2 73460267 . A . PASS END=73460267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,720:0,11,255:17,0 chr2 73460268 . G . PASS END=73460269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr2 73460270 . C . PASS END=73460271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:21:20:0,21,623:0,21,255:18,0 chr2 73460272 . G . PASS END=73460272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 73460273 . C . PASS END=73460273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,537:0,10,255:17,0 chr2 73460274 . G . PASS END=73460275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 73460276 . C . PASS END=73460276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:15,0 chr2 73460277 . G . PASS END=73460278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,574:0,10,255:16,0 chr2 73460279 . C . PASS END=73460279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:15,0 chr2 73460280 . G . PASS END=73460280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,607:0,40,255:15,0 chr2 73460281 . G . PASS END=73460281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:14,0 chr2 73460282 . G . PASS END=73460282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:14,0 chr2 73460283 . G . PASS END=73460283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,582:0,10,255:13,0 chr2 73460284 . A . PASS END=73460286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,576:0,40,255:15,0 chr2 73460287 . A . PASS END=73460288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:9,0 chr2 73461507 . A . PASS END=73461512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 73466673 . A . PASS END=73466678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,137,255:40,0 chr2 73466771 . C . PASS END=73466909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1260:0,93,255:40,0 chr2 73466910 . T . PASS END=73466911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:28,1 chr2 73466912 . G . PASS END=73466920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 73466921 . A . PASS END=73466924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 73467565 . G . PASS END=73467630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,183,255:40,0 chr2 73467631 . C . PASS END=73467664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:87:50:0,87,1305:0,142,255:40,0 chr2 73467665 . T . PASS END=73467670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:60:49:0,60,900:0,147,255:25,0 chr2 73467671 . G . PASS END=73467671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:57:49:0,57,855:0,147,255:19,0 chr2 73470132 . G . PASS END=73470138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 73470139 . A . PASS END=73470139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 73470140 . T . PASS END=73470144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr2 73470145 . C . PASS END=73470262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:29:0,87,1072:0,87,255:40,0 chr2 73471125 . G . PASS END=73471143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,255,255:40,0 chr2 73471144 . A . PASS END=73471177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,2:100:99:93:0,120,1800:0,204,255:40,0 chr2 73471672 . G . PASS END=73471674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 73471675 . G . PASS END=73471690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1000:0,81,255:33,0 chr2 73471691 . G . PASS END=73471709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1186:0,86,255:35,0 chr2 73471710 . C . PASS END=73471710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr2 73471711 . T . PASS END=73471826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:38:0,81,1215:0,101,255:40,0 chr2 73471827 . A . PASS END=73471828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 73471829 . G . PASS END=73471831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,120,255:27,0 chr2 73471832 . G . PASS END=73471835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 73471836 . C . PASS END=73471838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 73471839 . T . PASS END=73471843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 73474890 . G . PASS END=73474891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1033:0,87,255:31,0 chr2 73474892 . T . PASS END=73474893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 73474894 . C . PASS END=73474902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1172:0,85,255:32,0 chr2 73474903 . T . PASS END=73474903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:31,0 chr2 73474904 . A . PASS END=73475046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1215:0,91,255:40,0 chr2 73475047 . C . PASS END=73475054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:24,0 chr2 73476119 . G . PASS END=73476119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 73476120 . A . PASS END=73476120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1261:0,62,255:32,0 chr2 73476121 . T . PASS END=73476121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 73476122 . T . PASS END=73476122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1278:0,70,255:33,0 chr2 73476123 . A . PASS END=73476149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:35:0,80,1246:0,80,255:38,0 chr2 73476150 . A . PASS END=73476150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:38,0 chr2 73476151 . C . PASS END=73476159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:39:0,89,1368:0,89,255:40,0 chr2 73476160 . T . PASS END=73476160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1449:0,71,255:40,0 chr2 73476161 . G . PASS END=73476288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:32:0,84,1260:0,96,255:40,0 chr2 73476289 . T . PASS END=73476307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:23:0,69,884:0,69,255:25,0 chr2 73476947 . G . PASS END=73476973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,884:0,66,255:26,0 chr2 73476974 . G . PASS END=73476982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 73476983 . C . PASS END=73476984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73476985 . G . PASS END=73476987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73476988 . A . PASS END=73477014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr2 73477015 . G . PASS END=73477015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 73477016 . T . PASS END=73477022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 73477023 . A . PASS END=73477023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 73477024 . G . PASS END=73477044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr2 73477434 . G . PASS END=73477458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:26,0 chr2 73477459 . A . PASS END=73477459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73477460 . A . PASS END=73477460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 73477461 . G . PASS END=73477462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1133:0,93,255:31,0 chr2 73477463 . C . PASS END=73477463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 73477464 . C . PASS END=73477487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1014:0,85,255:35,0 chr2 73477488 . T . PASS END=73477488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:32,0 chr2 73477489 . G . PASS END=73477489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 73477490 . G . PASS END=73477490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr2 73477491 . C . PASS END=73477497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1136:0,88,255:36,0 chr2 73477498 . G . PASS END=73477498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:35,0 chr2 73477499 . A . PASS END=73477505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:97:36:0,97,1220:0,97,255:37,0 chr2 73477506 . T . PASS END=73477506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr2 73477507 . A . PASS END=73477564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,84,255:39,0 chr2 73477565 . A . PASS END=73477566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 73478354 . A . PASS END=73478382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:24,0 chr2 73478383 . C . PASS END=73478383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 73478384 . A . PASS END=73478384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 73478385 . T . PASS END=73478385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 73478386 . T . PASS END=73478397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:25,0 chr2 73478398 . C . PASS END=73478412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 73478413 . G . PASS END=73478413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:29,0 chr2 73478414 . G . PASS END=73478423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1094:0,90,255:35,0 chr2 73478424 . G . PASS END=73478443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1278:0,89,255:35,0 chr2 73478444 . C . PASS END=73478444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:30,0 chr2 73478445 . A . PASS END=73478460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1223:0,89,255:32,0 chr2 73478461 . A T, 45.79 PASS DP=32;MQ=243.39;MQRankSum=4.652;ReadPosRankSum=2.627;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,12,0:0.375,0.000:32:4,7,0:16,5,0:45:81,0,50,429,685,1115:255,0,255:19,0:4.5787e+01,1.3642e-04,5.3000e+01,4.2914e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,7,3,9:9,11,6,6 chr2 73478462 . T . PASS END=73478477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1131:0,80,255:31,0 chr2 73478478 . A . PASS END=73478480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1072:0,63,255:30,0 chr2 73478481 . T . PASS END=73478483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:30,0 chr2 73478484 . T . PASS END=73478484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:26,0 chr2 73478485 . C . PASS END=73478489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1194:0,83,255:29,0 chr2 73478490 . G . PASS END=73478490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:28,0 chr2 73478491 . C . PASS END=73478492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:30,0 chr2 73478493 . A . PASS END=73478493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1071:0,49,255:25,0 chr2 73478494 . G . PASS END=73478494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:26,0 chr2 73478495 . C . PASS END=73478498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:31:0,60,1039:0,60,255:25,0 chr2 73478499 . G . PASS END=73478499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:27,0 chr2 73478500 . T . PASS END=73478500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 73478501 . G . PASS END=73478501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:27,0 chr2 73478502 . A . PASS END=73478502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 73478503 . C . PASS END=73478503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1135:0,47,255:25,0 chr2 73478504 . A . PASS END=73478504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 73478505 . A . PASS END=73478505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1061:0,17,255:25,0 chr2 73478506 . T . PASS END=73478506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 73478507 . G . PASS END=73478507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:27,0 chr2 73478508 . C . PASS END=73478508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 73478509 . T . PASS END=73478509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:28,0 chr2 73478510 . G . PASS END=73478511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 73478512 . C . PASS END=73478512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:12:31:0,12,788:0,12,255:26,0 chr2 73478513 . T . PASS END=73478515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1042:0,90,255:31,0 chr2 73478516 . G . PASS END=73478516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,893:0,43,255:28,0 chr2 73478517 . A . PASS END=73478518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,950:0,60,255:30,0 chr2 73478519 . G . PASS END=73478519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,975:0,54,255:28,0 chr2 73478520 . C . PASS END=73478520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 73478521 . C . PASS END=73478521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,850:0,21,255:25,0 chr2 73478522 . A . PASS END=73478522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 73478523 . C . LowGQ END=73478523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,803:21,0,255:22,0 chr2 73478524 . A . PASS END=73478524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 73478525 . A . PASS END=73478526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 73478527 . C . PASS END=73478527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,812:0,43,255:23,0 chr2 73478528 . A . PASS END=73478529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,944:0,76,255:26,0 chr2 73478530 . T . PASS END=73478530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,797:0,26,255:23,0 chr2 73478531 . C . PASS END=73478531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,926:0,73,255:25,0 chr2 73478532 . T . PASS END=73478532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,719:0,12,255:23,0 chr2 73478533 . C . LowGQ END=73478533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,7:29:0:29:0,0,624:29,0,255:20,0 chr2 73478534 . A . PASS END=73478535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73478536 . C . PASS END=73478539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,875:0,70,255:26,0 chr2 73478540 . C . LowGQ END=73478541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,574:5,0,255:23,0 chr2 73478542 . G . PASS END=73478542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:24,0 chr2 73478543 . C . PASS END=73478543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,731:0,31,255:21,0 chr2 73478544 . G . PASS END=73478546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,915:0,64,255:24,0 chr2 73478547 . C . PASS END=73478547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,795:0,48,255:23,0 chr2 73478548 . T . PASS END=73478548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,744:0,33,255:22,0 chr2 73478549 . C . LowGQ END=73478549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,670:0,0,255:20,0 chr2 73478550 . G . PASS END=73478551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 73478552 . C . PASS END=73478553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:14:27:0,14,676:0,14,255:20,0 chr2 73478554 . T . PASS END=73478554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:8:25:0,8,605:0,8,255:18,0 chr2 73478555 . G . PASS END=73478558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:41:25:0,41,695:0,41,255:21,0 chr2 73478559 . A . LowGQ END=73478559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,570:14,0,255:15,0 chr2 73478560 . G . PASS END=73478560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 73479768 . G . PASS END=73479775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,917:0,66,255:25,0 chr2 73479776 . A . PASS END=73479776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 73479777 . T . PASS END=73479779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:29,0 chr2 73479780 . T . PASS END=73479791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1344:0,93,255:38,0 chr2 73479792 . A . PASS END=73479792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr2 73479793 . T . PASS END=73479868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:32:0,86,1233:0,86,255:38,0 chr2 73479869 . A . PASS END=73479869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr2 73479870 . G . PASS END=73479871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 73479872 . A . PASS END=73479885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr2 73479886 . C . PASS END=73479888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73479889 . G . PASS END=73479889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr2 73479890 . C . PASS END=73479896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 73479897 . G . PASS END=73479911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,962:0,65,255:26,0 chr2 73479912 . A . PASS END=73479917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 73479918 . A . PASS END=73479922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 73479923 . C . PASS END=73479925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 73479926 . C . PASS END=73479930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:20,0 chr2 73479931 . C . PASS END=73479933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:28:0,54,810:0,84,255:19,0 chr2 73479934 . C . PASS END=73479935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:24:0,63,945:0,71,255:21,0 chr2 73479936 . G . PASS END=73479936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 73479937 . T . PASS END=73479943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 73479944 . T . PASS END=73479977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 73479978 . C . PASS END=73479987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 73479988 . G . PASS END=73479989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:13:0,24,360:0,39,255:8,0 chr2 73486110 . T . PASS END=73486111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 73486112 . A . PASS END=73486115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:11,0 chr2 73486116 . G . PASS END=73486116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 73486117 . C . PASS END=73486125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 73486126 . A . LowGQ END=73486126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr2 73486127 . C . PASS END=73486132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,307:0,33,255:11,0 chr2 73486133 . T . LowGQ END=73486133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:10,0 chr2 73486134 . G . PASS END=73486155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 73486156 . G . PASS END=73486172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,360:0,30,255:12,0 chr2 73486309 . C . PASS END=73486309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 73486310 . T . PASS END=73486319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr2 73486320 . T . PASS END=73486320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr2 73486321 . C . PASS END=73486327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 73486328 . T . PASS END=73486328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr2 73486329 . C . PASS END=73486335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,884:0,84,255:29,0 chr2 73486336 . C . PASS END=73486336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 73486337 . A . PASS END=73486397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1064:0,80,255:36,0 chr2 73486398 . C . PASS END=73486412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:25:0,66,990:0,75,255:25,0 chr2 73486413 . T . PASS END=73486413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 73486414 . C . PASS END=73486424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,892:0,61,255:24,0 chr2 73487517 . T . PASS END=73487518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 73487519 . T . PASS END=73487519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr2 73487520 . T . PASS END=73487523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 73487524 . G . PASS END=73487526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 73487527 . C . PASS END=73487528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,967:0,65,255:26,0 chr2 73487529 . G . PASS END=73487534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr2 73487535 . C . PASS END=73487535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr2 73487536 . C . PASS END=73487543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 73487544 . T . PASS END=73487544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 73487545 . G . PASS END=73487577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr2 73487578 . T . PASS END=73487579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:27,0 chr2 73487580 . C . PASS END=73487580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 73487581 . C . PASS END=73487582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,1 chr2 73487583 . T . PASS END=73487590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 73487591 . T . PASS END=73487631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr2 73487632 . C . PASS END=73487658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 73487659 . C . PASS END=73487673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr2 73487674 . C . PASS END=73487675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 73487868 . C . PASS END=73487872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr2 73487873 . G . PASS END=73487873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 73487874 . A . PASS END=73487874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 73487875 . T . PASS END=73487891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 73487892 . C . PASS END=73487909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 73487910 . C . PASS END=73487910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 73487911 . C . PASS END=73487915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr2 73487916 . G . PASS END=73487916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 73487917 . G . PASS END=73487945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,742:0,66,255:24,0 chr2 73487946 . T . PASS END=73487946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 73487947 . C . PASS END=73487947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73487948 . A . PASS END=73487948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 73487949 . T . PASS END=73487950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73487951 . T . PASS END=73487951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 73487952 . G . PASS END=73487954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73487955 . G . PASS END=73487956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr2 73487957 . C . PASS END=73487958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 73487959 . G . PASS END=73487959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:18,0 chr2 73487960 . C . PASS END=73487962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr2 73487963 . T . PASS END=73487964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 73487965 . A . PASS END=73487965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:19,0 chr2 73487966 . C . PASS END=73487971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:19,0 chr2 73487972 . C . PASS END=73487972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,612:0,5,255:15,0 chr2 73487973 . G . PASS END=73487983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,675:0,44,255:15,0 chr2 73487984 . T . PASS END=73487984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 73487985 . G . PASS END=73487986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr2 73490341 . C . PASS END=73490374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:29,0 chr2 73490375 . T . PASS END=73490376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73490377 . T . PASS END=73490377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 73490378 . C . PASS END=73490380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73490381 . T . PASS END=73490409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 73490410 . T . PASS END=73490410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:19,0 chr2 73490411 . C . PASS END=73490411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 73490412 . A G, 49.61 PASS DP=22;MQ=248.84;MQRankSum=3.132;ReadPosRankSum=2.539;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:5,7,0:7,3,0:48:84,0,50,358,429,787:255,0,255:11,0:4.9606e+01,6.9375e-05,5.3000e+01,3.5758e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,6,4:8,4,7,3 chr2 73490413 . T . PASS END=73490423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 73490424 . G . PASS END=73490436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,765:0,50,255:19,0 chr2 73490806 . C . PASS END=73490806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 73490807 . T . PASS END=73490807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 73490808 . G . PASS END=73490816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 73490817 . A . PASS END=73490827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:24,0 chr2 73490828 . C . PASS END=73490828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 73490829 . A . PASS END=73490833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:25,0 chr2 73490834 . A . PASS END=73490834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 73490835 . G . PASS END=73490842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 73490843 . T . PASS END=73490844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 73490845 . G . PASS END=73490852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,992:0,65,255:26,0 chr2 73490853 . G . PASS END=73490858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr2 73490859 . G . PASS END=73490869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,76,255:26,0 chr2 73490870 . G . PASS END=73490873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73490874 . G . PASS END=73490874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 73490875 . T . PASS END=73490881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 73490882 . A . PASS END=73490889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr2 73490890 . A . PASS END=73490890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,846:0,54,255:24,0 chr2 73490891 . T . PASS END=73490908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr2 73490909 . T . PASS END=73490909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:23,2 chr2 73490910 . C . PASS END=73490910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,853:0,12,255:22,2 chr2 73490911 . C . PASS END=73490911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr2 73490912 . C . PASS END=73490924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 73490925 . C . PASS END=73490926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 73490927 . G . PASS END=73490952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,64,255:26,0 chr2 73490953 . C . PASS END=73490958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,810:0,53,255:19,0 chr2 73491066 . C . PASS END=73491070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 73491071 . G . PASS END=73491086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:31,0 chr2 73491087 . T . PASS END=73491087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 73491088 . C . PASS END=73491103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 73491104 . T . PASS END=73491104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 73491105 . C . PASS END=73491141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1131:0,86,255:34,0 chr2 73491142 . A . PASS END=73491142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr2 73491143 . G . PASS END=73491161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr2 73491162 . T . PASS END=73491162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 73491163 . G . PASS END=73491176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 73491177 . A . PASS END=73491181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 73491406 . C . PASS END=73491406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 73491407 . T . PASS END=73491412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:23,0 chr2 73491413 . C . PASS END=73491413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 73491414 . A . PASS END=73491426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:24,0 chr2 73491427 . C . PASS END=73491427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr2 73491428 . T . PASS END=73491441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,878:0,61,255:26,0 chr2 73491442 . T . PASS END=73491442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 73491443 . G . PASS END=73491443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 73491444 . T . PASS END=73491449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 73491450 . C . PASS END=73491459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 73491460 . G . PASS END=73491468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:31,0 chr2 73491469 . G . PASS END=73491469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 73491470 . A . PASS END=73491502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1163:0,80,255:34,0 chr2 73491503 . A . PASS END=73491503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:27,0 chr2 73491504 . G . PASS END=73491527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:31,0 chr2 73491528 . T . PASS END=73491528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 73491529 . G . PASS END=73491575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:29,0 chr2 73491576 . T . PASS END=73491605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,71,255:26,0 chr2 73491606 . T . PASS END=73491606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:19,0 chr2 73491607 . C . PASS END=73491610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr2 73491611 . G . PASS END=73491634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,712:0,44,255:19,0 chr2 73491635 . C . PASS END=73491635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr2 73491636 . C . PASS END=73491643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 73491644 . C . PASS END=73491644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr2 73491645 . G . PASS END=73491645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 73491646 . G . PASS END=73491646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 73491647 . G . PASS END=73491647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 73492410 . C . PASS END=73492429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 73492430 . A . LowGQ END=73492430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:7,0,239:7,0 chr2 73492431 . A . PASS END=73492432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,250:0,24,250:8,0 chr2 73492433 . G . PASS END=73492433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 73492434 . G . PASS END=73492438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 73492439 . G . PASS END=73492439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr2 73492440 . C . PASS END=73492445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 73492446 . C . PASS END=73492446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 73492447 . A . PASS END=73492448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 73492449 . G . PASS END=73492450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 73492451 . C . PASS END=73492451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 73492452 . C . PASS END=73492453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73492454 . G . PASS END=73492469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr2 73492470 . A . PASS END=73492470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 73492471 . C . PASS END=73492476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 73492477 . C . PASS END=73492487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 73492488 . A . PASS END=73492488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr2 73492489 . C . PASS END=73492491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 73492492 . A . PASS END=73492492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 73492493 . G . PASS END=73492498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 73492499 . C . PASS END=73492499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 73492500 . G . PASS END=73492507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:18,0 chr2 73492508 . A . PASS END=73492508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 73492509 . C . PASS END=73492517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:46:18:0,46,629:0,46,255:19,0 chr2 73492518 . C . PASS END=73492518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 73492519 . A . PASS END=73492519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 73492520 . T . PASS END=73492529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 73492530 . C . PASS END=73492537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 73492538 . G . PASS END=73492539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73492540 . G . PASS END=73492540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 73492541 . C . PASS END=73492550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 73492551 . G . PASS END=73492551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 73492552 . G . PASS END=73492564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 73492565 . C . PASS END=73492576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 73492577 . G . PASS END=73492586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr2 73492587 . G . PASS END=73492587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:16,0 chr2 73492588 . C . PASS END=73492613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,615:0,40,255:18,0 chr2 73492614 . A T, 48.81 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=2.106;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:6,3,0:5,5,0:47:84,0,50,257,385,643:223,0,255:8,0:4.8809e+01,7.8953e-05,5.3000e+01,2.5741e+02,4.1986e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,4,4:3,8,5,3 chr2 73492615 . C . PASS END=73492626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:15,0 chr2 73492627 . C . PASS END=73492628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 73492629 . C . PASS END=73492649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr2 73492650 . T . PASS END=73492650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73492651 . G . PASS END=73492651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73492652 . C . PASS END=73492653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:12,0 chr2 73492654 . C . PASS END=73492655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73492656 . A . PASS END=73492664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 73492665 . G . PASS END=73492666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73492667 . C . PASS END=73492667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 73492668 . C . PASS END=73492669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:15,0 chr2 73492670 . C . PASS END=73492670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73492671 . T . PASS END=73492671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,404:0,12,255:10,0 chr2 73492672 . G . PASS END=73492672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 73492673 . T . PASS END=73492673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 73492674 . C . PASS END=73492675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 73492676 . T . PASS END=73492697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 73492698 . T . PASS END=73492700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 73492701 . G . PASS END=73492703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73492704 . G . PASS END=73492715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 73492716 . C . PASS END=73492716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73492717 . A . PASS END=73492717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 73492718 . C . PASS END=73492742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 73492743 . A . PASS END=73492743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 73492744 . T . PASS END=73492746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 73492747 . G . PASS END=73492768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 73493021 . C . PASS END=73493023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 73493024 . G . PASS END=73493027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 73493028 . T . PASS END=73493039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 73493040 . C . PASS END=73493053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,806:0,63,255:23,0 chr2 73493054 . G . PASS END=73493057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 73493058 . A . PASS END=73493058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 73493059 . T . PASS END=73493060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 73493061 . T . PASS END=73493061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:26,0 chr2 73493062 . G . PASS END=73493170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:28:0,83,1025:0,83,255:40,0 chr2 73493171 . A . PASS END=73493171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1313:0,76,255:38,0 chr2 73493172 . G . PASS END=73493177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,117,1755:0,126,255:40,0 chr2 73493178 . A . PASS END=73493178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:36:42:0,36,928:0,36,255:35,0 chr2 73493179 . A . PASS END=73493213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1158:0,88,255:39,0 chr2 73493214 . G . PASS END=73493214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:27,0 chr2 73493215 . A . PASS END=73493221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 73493222 . T . PASS END=73493222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,810:0,53,255:25,0 chr2 73493223 . T . PASS END=73493232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 73493233 . G . PASS END=73493233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,820:0,56,255:26,0 chr2 73493234 . G . PASS END=73493240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 73493241 . G . PASS END=73493241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 73493242 . G . PASS END=73493252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 73493253 . A . PASS END=73493253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73493254 . G . PASS END=73493265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:32,0 chr2 73493266 . A . PASS END=73493278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,92,255:32,0 chr2 73493279 . C . PASS END=73493279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:27,0 chr2 73493280 . C . PASS END=73493288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,92,255:29,0 chr2 73493289 . C . PASS END=73493291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:31:0,78,1170:0,93,255:26,0 chr2 73493292 . A . PASS END=73493294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1145:0,80,255:27,0 chr2 73493295 . C . PASS END=73493302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 73493303 . T C, 50.00 PASS DP=28;MQ=249.79;MQRankSum=3.837;ReadPosRankSum=2.918;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,14,0:0.500,0.000:28:6,5,0:8,9,0:48:85,0,50,472,472,944:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,6,8:6,8,9,5 chr2 73493304 . G . PASS END=73493321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 73493322 . C . PASS END=73493322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:26,0 chr2 73493323 . C . PASS END=73493324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 73493325 . G . PASS END=73493325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 73493326 . G . PASS END=73493327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 73493328 . C . PASS END=73493328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 73493329 . T . PASS END=73493330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 73493331 . T . PASS END=73493331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 73493332 . C . PASS END=73493332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 73493333 . A . PASS END=73493333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 73493334 . T . PASS END=73493334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73493335 . T . PASS END=73493336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr2 73493337 . G . PASS END=73493340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73493341 . G . PASS END=73493341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 73493342 . G . PASS END=73493345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73493346 . G . PASS END=73493348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 73493349 . A . PASS END=73493349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:24,0 chr2 73493350 . G . PASS END=73493361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:25,0 chr2 73493362 . G . PASS END=73493362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:23,0 chr2 73493363 . A . PASS END=73493368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,939:0,64,255:23,0 chr2 73493369 . G . PASS END=73493369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr2 73493370 . G . PASS END=73493371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 73493372 . G . PASS END=73493372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 73493373 . C . PASS END=73493379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 73493380 . A . PASS END=73493380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 73493381 . T . PASS END=73493381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73493382 . C . PASS END=73493382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr2 73493383 . A . PASS END=73493390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,798:0,50,255:19,0 chr2 73493391 . C . PASS END=73493391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 73493392 . T . PASS END=73493392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr2 73493393 . A . PASS END=73493431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,512:0,42,255:19,0 chr2 73493432 . A . PASS END=73493432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 73493433 . A . PASS END=73493436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 73493437 . G . PASS END=73493454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr2 73493455 . T . PASS END=73493455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr2 73493456 . C . PASS END=73493458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 73493585 . C . PASS END=73493585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 73493586 . A . PASS END=73493598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 73493599 . C . PASS END=73493599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 73493600 . C . PASS END=73493609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr2 73493610 . G . PASS END=73493610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 73493611 . G . PASS END=73493611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr2 73493612 . T . PASS END=73493613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 73493614 . C . PASS END=73493614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 73493615 . A . PASS END=73493628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 73493629 . C . PASS END=73493629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 73493630 . A . PASS END=73493657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,612:0,48,255:19,0 chr2 73493658 . G . PASS END=73493658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 73493659 . T . PASS END=73493676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 73493677 . T . PASS END=73493677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 73493678 . G . PASS END=73493684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 73493685 . T . PASS END=73493686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 73493687 . C . PASS END=73493687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73493688 . A . PASS END=73493694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,549:0,32,255:13,0 chr2 73493695 . G . PASS END=73493701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 73493702 . A . PASS END=73493702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 73493703 . C . PASS END=73493715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 73493716 . C . PASS END=73493716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr2 73493717 . A . PASS END=73493720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 73493721 . A . PASS END=73493721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 73493722 . G . PASS END=73493730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 73493731 . T . PASS END=73493731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 73493732 . G . PASS END=73493735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 73493736 . T . PASS END=73493736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 73493737 . G . PASS END=73493803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:18,0 chr2 73493804 . C . PASS END=73493810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 73495854 . T . PASS END=73495870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr2 73495871 . C . PASS END=73495872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 73495873 . C . PASS END=73495873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr2 73495874 . C . PASS END=73495877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 73495878 . T . PASS END=73495878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 73495879 . C . PASS END=73495885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 73495886 . C . PASS END=73495886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 73495887 . A . PASS END=73495889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 73495890 . A . PASS END=73495890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 73495891 . G . PASS END=73495901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 73495902 . A . PASS END=73495902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 73495903 . G . PASS END=73495905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 73495906 . A . PASS END=73495906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 73495907 . G . PASS END=73495943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,627:0,40,255:19,0 chr2 73495944 . A . PASS END=73495944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,532:0,18,255:16,0 chr2 73495945 . G . PASS END=73495983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,613:0,44,255:17,0 chr2 73495984 . C . PASS END=73495996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 73495997 . C . PASS END=73495997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73495998 . T . PASS END=73495998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73495999 . C . PASS END=73496004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 73496005 . G . PASS END=73496005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 73496006 . C . PASS END=73496008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 73496009 . A . PASS END=73496038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 73496039 . C . PASS END=73496045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 73496046 . T . PASS END=73496051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 73496052 . C . PASS END=73496056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 73496057 . C . LowGQ END=73496057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:9,0 chr2 73496058 . A . PASS END=73496070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:11,0 chr2 73496071 . T . PASS END=73496071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 73496072 . C . PASS END=73496099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 73496100 . T . PASS END=73496100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 73496101 . C . PASS END=73496146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr2 73496147 . G . PASS END=73496147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 73496148 . C . PASS END=73496148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr2 73496149 . G . PASS END=73496149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 73496150 . C . PASS END=73496159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 73496160 . T . PASS END=73496171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:18,0 chr2 73496172 . A . PASS END=73496172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 73496173 . C . PASS END=73496176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr2 73496177 . A . PASS END=73496178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 73496179 . C . PASS END=73496179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr2 73496180 . G . PASS END=73496180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 73496181 . G . PASS END=73496184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 73496185 . A . PASS END=73496185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:20,0 chr2 73496186 . G . PASS END=73496191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 73496192 . C . PASS END=73496192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr2 73496193 . G . PASS END=73496193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 73496194 . C . PASS END=73496194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 73496195 . G . PASS END=73496197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 73496198 . C . PASS END=73496198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:22,0 chr2 73496199 . G . PASS END=73496229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,841:0,69,255:25,0 chr2 73496230 . G . PASS END=73496230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:23,0 chr2 73496231 . G . PASS END=73496244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:24,0 chr2 73496245 . G . PASS END=73496245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 73496246 . C . PASS END=73496248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 73496249 . C . PASS END=73496249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,860:0,36,255:23,0 chr2 73496250 . G . PASS END=73496256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,939:0,75,255:25,0 chr2 73496257 . A . PASS END=73496257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr2 73496258 . C . PASS END=73496265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:28,0 chr2 73496266 . A . PASS END=73496266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 73496267 . C . PASS END=73496277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:29,0 chr2 73496278 . T . PASS END=73496278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 73496279 . G . PASS END=73496280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 73496281 . G . PASS END=73496281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 73496282 . G . PASS END=73496289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 73496290 . G . PASS END=73496290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 73496291 . C . PASS END=73496294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr2 73496295 . C . PASS END=73496295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 73496296 . C . PASS END=73496296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 73496297 . C . PASS END=73496307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:29:0,60,900:0,71,255:26,0 chr2 73496308 . C . PASS END=73496308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 73496309 . G . PASS END=73496358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,787:0,69,255:25,0 chr2 73496359 . C . PASS END=73496359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 73496360 . G . PASS END=73496366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 73496367 . T . PASS END=73496387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,50,255:18,0 chr2 73496388 . G . PASS END=73496410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 73496411 . G . PASS END=73496411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 73496412 . G . PASS END=73496418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 73496419 . G . PASS END=73496429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 73496430 . T . PASS END=73496430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 73496431 . G . PASS END=73496435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 73496436 . T . PASS END=73496437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73496438 . G . PASS END=73496438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 73496439 . T . PASS END=73496458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 73496459 . G . PASS END=73496465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr2 73496466 . G . PASS END=73496466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr2 73496467 . G . PASS END=73496469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 73496470 . C . PASS END=73496470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr2 73496471 . G . PASS END=73496493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr2 73496494 . A . PASS END=73496509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,172:6,0 chr2 73496510 . G . PASS END=73496510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 73496511 . A . PASS END=73496523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr2 73496524 . C . LowGQ END=73496534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,45:0,0,104:4,0 chr2 73496535 . G . PASS END=73496538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr2 73496539 . G . PASS END=73496543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,243:7,0 chr2 73496544 . G . LowGQ END=73496544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr2 73496545 . C . PASS END=73496547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 73496548 . C . PASS END=73496548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 73496549 . G . PASS END=73496569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr2 73496570 . C . PASS END=73496601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr2 73496602 . C . PASS END=73496602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,418:0,8,255:12,0 chr2 73496603 . G . PASS END=73496603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 73496604 . G . PASS END=73496615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr2 73496616 . C . PASS END=73496629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 73496630 . C . PASS END=73496630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 73496631 . T . PASS END=73496632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 73496633 . G . PASS END=73496633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 73496634 . G . PASS END=73496636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73496637 . A . PASS END=73496637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr2 73496638 . G . PASS END=73496663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:12,0 chr2 73496664 . C . PASS END=73496664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 73496665 . T . PASS END=73496675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr2 73496676 . T . PASS END=73496683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 73496684 . C . PASS END=73496703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 73496704 . A . PASS END=73496709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr2 73496710 . T . PASS END=73496740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:6,0 chr2 73496741 . C . PASS END=73496758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:2:0,3,45:0,6,78:3,0 chr2 73518585 . T . PASS END=73518586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 73518587 . A . PASS END=73518587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 73518588 . G . PASS END=73518589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 73518590 . G . PASS END=73518590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 73518591 . A . LowGQ END=73518591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,380:0,0,255:12,0 chr2 73518592 . G . PASS END=73518595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 73518596 . C . PASS END=73518596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 73518597 . G . PASS END=73518599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 73518600 . G . PASS END=73518600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 73518601 . G . PASS END=73518612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 73518613 . G . PASS END=73518613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 73518614 . A . PASS END=73518615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 73518616 . T . PASS END=73518616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 73518617 . A . PASS END=73518620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 73518621 . G . PASS END=73518621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr2 73518622 . C . PASS END=73518648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr2 73518649 . C . PASS END=73518649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 73518650 . G . PASS END=73518665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr2 73518666 . G . PASS END=73518667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 73518668 . G . PASS END=73518675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 73518676 . C . PASS END=73518677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 73518678 . G . PASS END=73518714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:17,0 chr2 73518715 . C . PASS END=73518721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 73518722 . C . PASS END=73518727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 73518728 . A . PASS END=73518728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73518729 . A . PASS END=73518731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 73518732 . A . PASS END=73518733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 73518734 . A . PASS END=73518784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:17,0 chr2 73518785 . G . PASS END=73518785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:15,0 chr2 73518786 . G . PASS END=73518801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 73518802 . C . PASS END=73518802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 73518803 . A . PASS END=73518805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 73518806 . T . PASS END=73518806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr2 73518807 . G . PASS END=73518809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 73518810 . G . PASS END=73518810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr2 73518811 . C . PASS END=73518821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:16,0 chr2 73518822 . T . PASS END=73518822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,476:0,34,255:14,0 chr2 73518823 . T . PASS END=73518824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 73518825 . G . PASS END=73518825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 73518826 . T . PASS END=73518842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr2 73518843 . C . PASS END=73518849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73518850 . C . PASS END=73518865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr2 73518866 . A . PASS END=73518866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 73518867 . G . PASS END=73518867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 73518868 . C . PASS END=73518894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 73518895 . A . LowGQ END=73518898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:12:0,0,380:0,0,255:11,0 chr2 73518899 . G . PASS END=73518922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:13,0 chr2 73518923 . G . PASS END=73518923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 73518924 . C . PASS END=73518935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr2 73518936 . G . PASS END=73518936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 73518937 . C . PASS END=73518949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,449:0,36,255:12,0 chr2 73518950 . A . PASS END=73518950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 73518951 . T . PASS END=73518951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,331:0,3,255:8,0 chr2 73518952 . T . PASS END=73518966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,341:0,27,255:9,0 chr2 73518967 . C . PASS END=73518985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:12,0 chr2 73518986 . C . PASS END=73518986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr2 73518987 . C . PASS END=73518988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 73518989 . G . PASS END=73518989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 73518990 . G . PASS END=73518994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 73518995 . A . PASS END=73518995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr2 73518996 . A . PASS END=73518997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 73518998 . G . PASS END=73518998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 73518999 . G . PASS END=73519002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:12,0 chr2 73519003 . G . PASS END=73519009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr2 73519010 . G . PASS END=73519010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 73519011 . C . PASS END=73519017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 73519018 . A . PASS END=73519018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 73519019 . C . PASS END=73519019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 73519020 . G . PASS END=73519026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 73519027 . G . PASS END=73519039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr2 73519040 . T G, 49.82 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=1.493;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,6,0:0.462,0.000:13:3,5,0:4,1,0:48:85,0,50,178,222,399:163,0,188:7,0:4.9822e+01,6.7045e-05,5.3000e+01,1.7779e+02,2.5629e+02,4.0231e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,6,2,4:5,2,3,3 chr2 73519041 . G . PASS END=73519066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 73519067 . G . PASS END=73519077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr2 73519078 . T . PASS END=73519094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,466:0,39,255:13,0 chr2 73519095 . G . PASS END=73519112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:15,0 chr2 73519113 . A . PASS END=73519113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 73519114 . A . PASS END=73519114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 73519115 . G . PASS END=73519115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 73519116 . C . PASS END=73519140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,507:0,45,255:16,0 chr2 73519141 . T . PASS END=73519141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:13,0 chr2 73519142 . C . PASS END=73519193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 73519194 . A . PASS END=73519194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 73519195 . G . PASS END=73519198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 73519199 . G . PASS END=73519199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73519200 . G . PASS END=73519200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 73519201 . C . PASS END=73519211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr2 73519212 . C . PASS END=73519213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73519214 . C . PASS END=73519221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 73519222 . T . PASS END=73519223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 73519224 . A . PASS END=73519234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr2 73519235 . G . PASS END=73519236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 73519237 . G . PASS END=73519240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 73519241 . A . PASS END=73519241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 73519242 . A . PASS END=73519254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr2 73519255 . C . PASS END=73519255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 73519256 . C . PASS END=73519277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,584:0,41,255:17,0 chr2 73519278 . T . PASS END=73519278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr2 73519279 . G . PASS END=73519298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,599:0,48,255:17,0 chr2 73519299 . A . PASS END=73519299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 73519300 . G . PASS END=73519306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 73519307 . T . PASS END=73519307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 73519308 . G . PASS END=73519310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 73519311 . G . PASS END=73519311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 73519312 . G . PASS END=73519327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 73519328 . T . PASS END=73519328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:15,0 chr2 73519329 . C . PASS END=73519370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,576:0,48,255:18,0 chr2 73519371 . G . PASS END=73519376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:16:0,36,540:0,48,255:13,0 chr2 73519377 . T . PASS END=73519377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 73519378 . C . PASS END=73519381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 73519382 . G . PASS END=73519387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:14,0 chr2 73519388 . C . PASS END=73519419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,388:0,33,255:13,0 chr2 73519420 . T . PASS END=73519420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 73519421 . C . PASS END=73519432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr2 73519433 . A . PASS END=73519433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 73519434 . G . PASS END=73519437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 73519438 . C . PASS END=73519439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr2 73519440 . C . PASS END=73519440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 73519441 . T . PASS END=73519444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73519445 . A . PASS END=73519445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 73519446 . G . PASS END=73519452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr2 73519453 . A . PASS END=73519453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,344:0,22,255:11,0 chr2 73519454 . C . PASS END=73519454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 73519455 . A . PASS END=73519455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 73519456 . G . PASS END=73519471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:11,0 chr2 73519472 . A . PASS END=73519472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 73519473 . G . PASS END=73519480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:12,0 chr2 73519481 . G . PASS END=73519482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:20:12:0,20,410:0,20,255:11,0 chr2 73519483 . G . PASS END=73519494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 73519495 . G . PASS END=73519495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 73519496 . G . PASS END=73519496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73519497 . C . PASS END=73519497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:11,0 chr2 73519498 . T . PASS END=73519498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 73519499 . T . PASS END=73519504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73519505 . C . PASS END=73519513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 73519514 . A . PASS END=73519516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73519517 . G . PASS END=73519520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 73519521 . A . PASS END=73519521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 73519522 . G . PASS END=73519539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:15,0 chr2 73519540 . G . PASS END=73519541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr2 73519542 . G . PASS END=73519542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73519543 . G . PASS END=73519543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 73519544 . G . PASS END=73519544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 73519545 . G . PASS END=73519545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 73519546 . G . PASS END=73519552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 73519553 . C . PASS END=73519555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73519556 . A . PASS END=73519556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr2 73519557 . A . PASS END=73519582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 73519583 . G . PASS END=73519583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr2 73519584 . G . PASS END=73519585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 73519586 . A . PASS END=73519586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 73519587 . A . PASS END=73519587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 73519588 . G . PASS END=73519589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:13:10:0,13,310:0,13,255:11,0 chr2 73519590 . G . PASS END=73519590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 73519591 . G . PASS END=73519597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,405:0,36,255:12,0 chr2 73519598 . C . PASS END=73519598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 73519599 . C . PASS END=73519599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 73519600 . A . PASS END=73519600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 73519601 . G . PASS END=73519604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 73519605 . C . PASS END=73519605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 73519606 . G . PASS END=73519609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 73519610 . A . PASS END=73519610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,402:0,8,255:12,0 chr2 73519611 . G . PASS END=73519614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 73519615 . A . PASS END=73519616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 73519617 . G . PASS END=73519617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 73519618 . T . PASS END=73519618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr2 73519619 . C . PASS END=73519620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 73519621 . G . PASS END=73519621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr2 73519622 . G . PASS END=73519622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 73519623 . C . PASS END=73519623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr2 73519624 . G . PASS END=73519625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 73519626 . A . LowGQ END=73519626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:9,0 chr2 73519627 . C . PASS END=73519642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 73519643 . C . PASS END=73519643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 73519644 . G . PASS END=73519658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr2 73519659 . A . PASS END=73519659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr2 73519660 . G . PASS END=73519660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 73519661 . G . PASS END=73519662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,332:0,14,255:9,0 chr2 73519663 . G . PASS END=73519664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73519665 . A . PASS END=73519665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 73519666 . T . PASS END=73519672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 73519673 . G . PASS END=73519674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 73519675 . G . PASS END=73519678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr2 73519679 . T . PASS END=73519679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr2 73519680 . G . PASS END=73519732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:9,0 chr2 73519733 . T . PASS END=73519734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 73519735 . A . PASS END=73519742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 73519743 . G . PASS END=73519743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 73519744 . A . PASS END=73519766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr2 73519767 . T . PASS END=73519770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 73519771 . G . PASS END=73519771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 73519772 . G . PASS END=73519802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:13,0 chr2 73519803 . G . PASS END=73519875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:19,0 chr2 73519876 . C . PASS END=73519885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr2 73519886 . A . PASS END=73519887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 73519888 . G . PASS END=73519889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 73519890 . C . PASS END=73519890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 73519891 . C . PASS END=73519909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 73520310 . C . PASS END=73520338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:24,0 chr2 73520339 . T . PASS END=73520339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 73520340 . C . PASS END=73520355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:25,0 chr2 73520356 . G . PASS END=73520356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr2 73520357 . G . PASS END=73520359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr2 73520360 . A . PASS END=73520360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,864:0,47,255:25,0 chr2 73520361 . A . PASS END=73520370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,898:0,62,255:26,0 chr2 73520371 . G . PASS END=73520372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 73520373 . G . PASS END=73520381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr2 73520382 . A . PASS END=73520383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 73520384 . C . PASS END=73520384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 73520385 . A . PASS END=73520386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 73520387 . C . PASS END=73520387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 73520388 . C . PASS END=73520391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 73520392 . A . PASS END=73520392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1037:0,60,255:27,0 chr2 73520393 . G . PASS END=73520413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1161:0,80,255:30,0 chr2 73520414 . T . PASS END=73520414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 73520415 . C . PASS END=73520443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1103:0,80,255:32,0 chr2 73520444 . A . PASS END=73520460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,79,255:26,0 chr2 73520461 . G . PASS END=73520461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73520462 . T . PASS END=73520462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 73520463 . G . PASS END=73520465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73520466 . G . PASS END=73520510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,886:0,72,255:25,0 chr2 73520511 . G . PASS END=73520511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 73520512 . G . PASS END=73520521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,900:0,72,255:25,0 chr2 73520522 . G . PASS END=73520530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:19,0 chr2 73520531 . T . PASS END=73520531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:17,0 chr2 73520532 . C . PASS END=73520604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr2 73520605 . C . PASS END=73520605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr2 73520606 . C . PASS END=73520606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 73520607 . G . PASS END=73520607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr2 73520608 . C . PASS END=73520617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr2 73520618 . G . PASS END=73520654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 73520655 . T . PASS END=73520655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 73520656 . C . PASS END=73520678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 73520679 . C . PASS END=73520681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 73520682 . G . PASS END=73520693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 73520694 . C . PASS END=73520695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 73520696 . C . PASS END=73520696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 73520697 . A . PASS END=73520725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,296:0,24,255:9,0 chr2 73520726 . G . PASS END=73520754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 73612890 . G . PASS END=73612890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 73612906 . A . PASS END=73612906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:16,0 chr2 73612919 . A . PASS END=73612919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:18,0 chr2 73612933 . C . PASS END=73612933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:14,0 chr2 73612944 . C . PASS END=73612944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr2 73612949 . C . PASS END=73612949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 73612951 . T . PASS END=73612951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:27:15:0,27,405:0,28,255:9,0 chr2 73612977 . G . PASS END=73612977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:13,0 chr2 73612978 . C . PASS END=73612978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 73612981 . A . PASS END=73612981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,382:0,3,255:13,0 chr2 73612985 . C . PASS END=73612985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 73612988 . G . PASS END=73612988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 73612990 . C . PASS END=73612990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 73612995 . A . PASS END=73612996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:12,0 chr2 73612997 . A . PASS END=73612997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,447:0,15,255:11,0 chr2 73612998 . T . PASS END=73613000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,482:0,31,255:11,0 chr2 73613001 . A . PASS END=73613001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr2 73613002 . G . PASS END=73613006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 73613007 . A . PASS END=73613007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:9,0 chr2 73613008 . G . PASS END=73613010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:11,0 chr2 73613011 . T . LowGQ END=73613011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,427:21,0,255:6,0 chr2 73613012 . C . PASS END=73613012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:7,0 chr2 73613013 . T . PASS END=73613017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:21:16:0,21,315:0,26,255:8,0 chr2 73613018 . T . LowGQ END=73613018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,515:13,0,255:6,0 chr2 73613019 . G . PASS END=73613020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:21:21:0,21,315:0,63,255:7,0 chr2 73613021 . C . PASS END=73613021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,673:0,16,255:5,0 chr2 73613022 . C . PASS END=73613025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:19:0,21,315:0,24,255:7,0 chr2 73613026 . C . PASS END=73613027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:12:19:0,12,180:0,26,255:4,0 chr2 73613028 . A . PASS END=73613028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:3,0 chr2 73613029 . G . PASS END=73613030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,180:0,10,255:4,0 chr2 73613031 . TGGAGGA T,TGGAGGAGGA, 158.56 PASS DP=20;MQ=246.51;MQRankSum=1.042;ReadPosRankSum=-0.116;FractionInformativeReads=0.750;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:1,7,7,0:0.467,0.467,0.000:15:1,3,4,0:0,4,3,0:46:169,158,52,114,0,51,269,269,269,269:255,0,148:2,14:1.5856e+02,1.5340e+02,5.0000e+01,1.0856e+02,9.9662e-05,4.8880e+01,2.9333e+02,2.9833e+02,2.9833e+02,2.9634e+02:0.00,5.00,8.01,5.00,10.00,8.01,34.77,39.77,39.77,37.78:1,0,12,2:1,0,9,5 chr2 73613032 . G . LowGQ END=73613038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:13,8:21:0:19:0,0,0:184,0,239:14,8 chr2 73613039 . G . PASS END=73613039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 73613040 . A . LowGQ END=73613040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,534:40,0,255:13,0 chr2 73613041 . G . PASS END=73613042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:17,0 chr2 73613043 . A . LowGQ END=73613044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,508:28,0,255:16,1 chr2 73613045 . G . PASS END=73613051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,723:0,49,255:18,0 chr2 73613052 . A . PASS END=73613053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:20,1 chr2 73613054 . G . PASS END=73613054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr2 73613055 . A . PASS END=73613055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,770:0,28,255:22,0 chr2 73613056 . G . PASS END=73613056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 73613057 . G . PASS END=73613057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 73613058 . A . PASS END=73613058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 73613059 . G . PASS END=73613070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 73613071 . A . PASS END=73613071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,1 chr2 73613072 . G . PASS END=73613074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:37:24:0,37,766:0,37,255:23,1 chr2 73613075 . G . PASS END=73613075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:24,0 chr2 73613076 . A . PASS END=73613079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 73613080 . G . PASS END=73613080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:24,0 chr2 73613081 . G . PASS END=73613082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr2 73613083 . T . PASS END=73613083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:14:26:0,14,759:0,14,255:23,0 chr2 73613084 . G . PASS END=73613084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,800:0,45,255:24,0 chr2 73613085 . C . PASS END=73613086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,1 chr2 73613087 . G . PASS END=73613088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:46:27:0,46,854:0,46,255:26,1 chr2 73613089 . G . PASS END=73613089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:30:27:0,30,910:0,30,255:25,1 chr2 73613090 . G . PASS END=73613101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,848:0,61,255:26,0 chr2 73613102 . A . PASS END=73613102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:24,0 chr2 73613103 . A . PASS END=73613111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 73613112 . A . PASS END=73613115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 73613116 . A . PASS END=73613116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,864:0,51,255:26,0 chr2 73613117 . G . PASS END=73613117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 73613118 . T . PASS END=73613119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73613120 . G . PASS END=73613121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73613122 . C . PASS END=73613122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr2 73613123 . G . PASS END=73613141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1088:0,80,255:30,0 chr2 73613142 . A . PASS END=73613142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,924:0,73,255:29,0 chr2 73613143 . G . PASS END=73613151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1052:0,93,255:31,0 chr2 73613152 . G . PASS END=73613152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1062:0,54,255:26,0 chr2 73613153 . G . PASS END=73613156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 73613157 . T . PASS END=73613158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:26,0 chr2 73613159 . G . PASS END=73613163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 73613164 . C . PASS END=73613166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 73613167 . C . PASS END=73613167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73613168 . T . PASS END=73613168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,911:0,37,255:26,0 chr2 73613169 . C . PASS END=73613174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 73613175 . A . PASS END=73613175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 73613176 . C . PASS END=73613177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73613178 . G . PASS END=73613179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 73613180 . C . PASS END=73613183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 73613184 . A . PASS END=73613185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr2 73613186 . C . PASS END=73613193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 73613194 . A . PASS END=73613219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,65,255:26,0 chr2 73613220 . A . PASS END=73613220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:19,0 chr2 73613221 . G . PASS END=73613229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr2 73613230 . C . PASS END=73613231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 73613232 . G . PASS END=73613237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 73613238 . A . PASS END=73613271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr2 73613272 . G . PASS END=73613272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 73613273 . C . PASS END=73613286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:14,0 chr2 73613287 . C . PASS END=73613291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 73613292 . C . PASS END=73613292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 73613293 . G . PASS END=73613303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 73613304 . G . PASS END=73613316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 73613317 . G . PASS END=73613317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 73613318 . A . PASS END=73613320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 73613324 . A . PASS END=73613324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 73635742 . A . PASS END=73635742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1451:0,104,255:39,0 chr2 73635744 . T . PASS END=73635744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1421:0,104,255:39,0 chr2 73635749 . G . PASS END=73635754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1383:0,84,255:40,0 chr2 73635755 . T . PASS END=73635755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1421:0,79,255:40,0 chr2 73635756 . C . PASS END=73635872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:97:42:0,97,1485:0,97,255:40,0 chr2 73635873 . C . PASS END=73635875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:75:41:0,75,1125:0,106,255:25,0 chr2 73635877 . T . PASS END=73635878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:39:0,75,1125:0,117,255:25,0 chr2 73646239 . A . PASS END=73646239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 73646246 . T . PASS END=73646246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73646251 . A . PASS END=73646255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 73646256 . A . PASS END=73646256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 73646257 . G . PASS END=73646269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1039:0,84,255:30,0 chr2 73646270 . G . PASS END=73646270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 73646271 . T . PASS END=73646275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 73646276 . C . PASS END=73646276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1098:0,63,255:30,0 chr2 73646277 . T . PASS END=73646285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1141:0,93,255:34,0 chr2 73646286 . G . PASS END=73646286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1224:0,58,255:33,0 chr2 73646287 . G . PASS END=73646446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:36:0,108,1321:0,108,255:40,0 chr2 73646448 . T . PASS END=73646451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,111,1665:0,128,255:38,0 chr2 73649980 . T . PASS END=73649981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 73649985 . T . PASS END=73650084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:82:52:0,82,1800:0,82,255:40,0 chr2 73650085 . A . PASS END=73650102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,195,255:40,0 chr2 73650105 . A . PASS END=73650106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,159,255:40,0 chr2 73651544 . C . PASS END=73651544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 73651546 . A . PASS END=73651546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 73651552 . T . PASS END=73651552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 73651558 . G . PASS END=73651565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr2 73651566 . C . PASS END=73651566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:14,0 chr2 73651567 . T . PASS END=73651572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:19,0 chr2 73651573 . G . PASS END=73651573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 73651574 . T . PASS END=73651574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,660:0,49,255:20,0 chr2 73651575 . C . PASS END=73651580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr2 73651581 . A . PASS END=73651581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 73651582 . T . PASS END=73651589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,878:0,61,255:26,0 chr2 73651590 . G . PASS END=73651591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 73651592 . T . PASS END=73651592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 73651593 . C . PASS END=73651640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1079:0,83,255:37,0 chr2 73651641 . A . PASS END=73651641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr2 73651642 . A . PASS END=73651929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:39:0,101,1374:0,101,255:40,0 chr2 73651930 . C . PASS END=73651966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,169,255:40,0 chr2 73651967 . C T, 50.00 PASS DP=68;MQ=250.00;MQRankSum=7.034;ReadPosRankSum=5.293;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,38,0:0.559,0.000:68:19,18,0:11,20,0:48:85,0,49,1335,1065,2400:255,0,255:27,0:5.0000e+01,7.1964e-05,5.1816e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,22,14,24:15,15,20,18 chr2 73651968 . G . PASS END=73652004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:93:36:0,93,1485:0,93,255:40,0 chr2 73652005 . T . PASS END=73652017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1117:0,82,255:31,0 chr2 73652018 . A . PASS END=73652029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:26,0 chr2 73652030 . A . PASS END=73652030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 73652032 . T . PASS END=73652032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 73652039 . C . PASS END=73652039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 73653570 . C . PASS END=73653570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 73653578 . T . PASS END=73653578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 73653581 . A . PASS END=73653681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,120,1800:0,125,255:40,0 chr2 73659306 . C . PASS END=73659306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 73659314 . G . PASS END=73659314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 73659318 . C . PASS END=73659318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 73659320 . C . PASS END=73659321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 73659323 . A . PASS END=73659323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 73659326 . C . PASS END=73659405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,93,255:40,0 chr2 73659406 . A . PASS END=73659407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 73659408 . A . PASS END=73659415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 73659416 . G . PASS END=73659416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr2 73659417 . C . PASS END=73659418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 73659419 . G . PASS END=73659420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 73659423 . C . PASS END=73659424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 73675076 . C . PASS END=73675076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 73675087 . T . PASS END=73675087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:25,0 chr2 73675090 . G . PASS END=73675091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73675092 . G . PASS END=73675092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73675093 . A . PASS END=73675184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:29:0,81,1215:0,87,255:40,0 chr2 73675185 . T . PASS END=73675226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:87:51:0,87,1305:0,129,255:40,0 chr2 73675227 . T TCTC, 49.74 PASS DP=56;MQ=250.00;MQRankSum=6.347;ReadPosRankSum=-1.677;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,26,0:0.473,0.000:55:15,13,0:14,13,0:48:79,0,50,1092,1117,2208:255,0,255:28,34:4.9738e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:16,13,13,13:16,13,14,12 chr2 73675228 . C . LowGQ END=73675228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,25:55:0:55:0,0,180:255,0,255:40,0 chr2 73675229 . T . PASS END=73675270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,120,1800:0,124,255:40,0 chr2 73675271 . A . PASS END=73675631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:85:34:0,85,1081:0,85,255:40,0 chr2 73675632 . G . PASS END=73675668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,120,1520:0,120,255:40,0 chr2 73675669 . T G, 197.02 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,27,0:0,23,0:147:235,150,0,1901,150,1901:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,28:0,0,27,23 chr2 73675670 . A . PASS END=73675706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,120,1800:0,128,255:40,0 chr2 73675707 . G . PASS END=73675777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:36:0,88,1349:0,88,255:40,0 chr2 73675778 . A . PASS END=73675778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1296:0,59,255:29,0 chr2 73675779 . G . PASS END=73675795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:40:0,93,1395:0,116,255:37,0 chr2 73675796 . T . PASS END=73675796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1504:0,68,255:33,0 chr2 73675797 . C . PASS END=73675806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,104,1435:0,104,255:40,0 chr2 73675807 . A . PASS END=73675834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:43:0,80,1460:0,80,255:40,0 chr2 73675835 . A . PASS END=73675835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1400:0,79,255:40,0 chr2 73675836 . C . PASS END=73675843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:43:0,101,1333:0,101,255:40,0 chr2 73675844 . C T, 48.42 PASS DP=43;MQ=249.15;MQRankSum=4.296;ReadPosRankSum=2.302;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,18,0:0.419,0.000:43:12,10,0:13,8,0:46:83,0,47,183,183,183:255,0,255:26,0:4.8423e+01,1.0587e-04,5.0000e+01,1.8319e+02,2.1796e+02,1.8620e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,9,13,5:15,10,7,11 chr2 73675845 . G . PASS END=73675881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,102,1588:0,102,255:40,0 chr2 73675882 . T . PASS END=73675932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:43:0,91,1462:0,91,255:40,0 chr2 73675933 . A . PASS END=73675933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1490:0,66,255:35,0 chr2 73675934 . G . PASS END=73676172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1194:0,83,255:40,0 chr2 73676173 . T . PASS END=73676173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73676174 . T . PASS END=73676192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 73676193 . A . PASS END=73676194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73676195 . G . PASS END=73676197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73676198 . T . PASS END=73676198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73676199 . G . PASS END=73676202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 73676203 . C . PASS END=73676220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1076:0,74,255:26,0 chr2 73676221 . C . PASS END=73676221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 73676222 . T . PASS END=73676226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,74,255:25,0 chr2 73676227 . C . PASS END=73676227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:24,0 chr2 73676228 . T . PASS END=73676228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:24,0 chr2 73676229 . G . PASS END=73676230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:24,0 chr2 73676231 . G . PASS END=73676233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:25,0 chr2 73676234 . C . PASS END=73676235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 73676236 . C . PASS END=73676237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 73676238 . T . PASS END=73676238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73676239 . C . PASS END=73676251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,869:0,65,255:26,0 chr2 73676252 . G . PASS END=73676252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr2 73676253 . C . PASS END=73676254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1039:0,71,255:28,0 chr2 73676255 . C . PASS END=73676255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73676256 . A . PASS END=73676259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 73676260 . C . PASS END=73676260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73676261 . T . PASS END=73676261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 73676262 . T . PASS END=73676263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73676264 . C . PASS END=73676264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr2 73676265 . T . PASS END=73676277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,970:0,70,255:27,0 chr2 73676278 . T . PASS END=73676278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:23,0 chr2 73676279 . A . PASS END=73676280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 73676281 . C . PASS END=73676281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:27,0 chr2 73676282 . C . PASS END=73676474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:32:0,85,1174:0,85,255:40,0 chr2 73676475 . G . PASS END=73676475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr2 73676476 . C . PASS END=73676520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1200:0,83,255:32,0 chr2 73676521 . C . PASS END=73676532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,80,255:26,0 chr2 73676533 . A . PASS END=73676533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:25,0 chr2 73676534 . A . PASS END=73676540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:26,0 chr2 73676541 . G . PASS END=73676544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 73676545 . T . PASS END=73676545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 73676546 . C . PASS END=73676547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 73676548 . A . PASS END=73676548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 73676549 . C . PASS END=73676650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1035:0,84,255:40,0 chr2 73676651 . T . PASS END=73676651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:33,0 chr2 73676652 . T . PASS END=73676653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 73676654 . A . PASS END=73676654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:32,0 chr2 73676655 . G . PASS END=73676655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr2 73676656 . G . PASS END=73676658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 73676659 . C . PASS END=73676659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr2 73676660 . C . PASS END=73676661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,102,1530:0,105,255:36,0 chr2 73676662 . T . PASS END=73676662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1150:0,56,255:34,0 chr2 73676663 . C . PASS END=73676668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,100,1307:0,100,255:39,0 chr2 73676669 . T . PASS END=73676669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1295:0,40,255:36,0 chr2 73676670 . A . PASS END=73676735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:39:0,82,1388:0,82,255:40,0 chr2 73676736 . A . PASS END=73676736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1429:0,57,255:39,0 chr2 73676737 . A . PASS END=73677074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:39:0,84,1368:0,84,255:40,0 chr2 73677075 . T . PASS END=73677075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:32,0 chr2 73677076 . C . PASS END=73677092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1304:0,94,255:35,0 chr2 73677093 . C . PASS END=73677093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:33,0 chr2 73677094 . A . PASS END=73677100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:35,0 chr2 73677101 . A . PASS END=73677101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:32,0 chr2 73677102 . A . PASS END=73677121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:36:0,94,1296:0,94,255:39,0 chr2 73677122 . G . PASS END=73677122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1341:0,65,255:32,0 chr2 73677123 . C . PASS END=73677142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:40:0,96,1440:0,104,255:37,0 chr2 73677143 . T . PASS END=73677143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1333:0,73,255:29,0 chr2 73677144 . A . PASS END=73677218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:33:0,82,1152:0,82,255:39,0 chr2 73677219 . T . PASS END=73677219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1372:0,65,255:34,0 chr2 73677220 . C . PASS END=73677240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1344:0,100,255:36,0 chr2 73677241 . A . PASS END=73677241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:32,0 chr2 73677242 . G . PASS END=73677247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1173:0,88,255:34,0 chr2 73677248 . T . PASS END=73677248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:33,0 chr2 73677249 . G . PASS END=73677306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1207:0,86,255:36,0 chr2 73677307 . T . PASS END=73677307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr2 73677308 . T . PASS END=73677335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1218:0,86,255:33,0 chr2 73677336 . A . PASS END=73677336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1138:0,74,255:29,0 chr2 73677337 . A . PASS END=73677553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:32:0,81,1063:0,81,255:40,0 chr2 73677554 . G . PASS END=73677554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1449:0,79,255:37,0 chr2 73677555 . T . PASS END=73677567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:42:0,96,1421:0,96,255:40,0 chr2 73677568 . A . PASS END=73677568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1405:0,74,255:38,0 chr2 73677569 . T . PASS END=73677570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1429:0,96,255:37,0 chr2 73677571 . T . PASS END=73677571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1349:0,76,255:35,0 chr2 73677572 . A . PASS END=73677587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:41:0,90,1311:0,90,255:38,0 chr2 73677588 . A . PASS END=73677588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1368:0,79,255:34,0 chr2 73677589 . A . PASS END=73677601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1244:0,94,255:37,0 chr2 73677602 . T . PASS END=73677602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1238:0,45,255:34,0 chr2 73677603 . C . PASS END=73677603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1320:0,100,255:34,0 chr2 73677604 . C . PASS END=73677604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1288:0,70,255:33,0 chr2 73677605 . T . PASS END=73677610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:37:0,94,1221:0,94,255:34,0 chr2 73677611 . A . PASS END=73677611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:31,0 chr2 73677612 . G . PASS END=73677613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 73677614 . T . PASS END=73677615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:37:0,75,1278:0,75,255:32,0 chr2 73677616 . A . PASS END=73677621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1279:0,95,255:35,0 chr2 73677622 . A . PASS END=73677622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:33,0 chr2 73677623 . G . PASS END=73677636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:34:0,88,1106:0,88,255:34,0 chr2 73677637 . T . PASS END=73677637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1031:0,42,255:28,0 chr2 73677638 . T . PASS END=73677639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1219:0,91,255:31,0 chr2 73677640 . T . PASS END=73677640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:29,0 chr2 73677641 . A . PASS END=73677641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:31,0 chr2 73677642 . C . PASS END=73677642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:30,0 chr2 73677643 . C . PASS END=73677651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1349:0,98,255:33,0 chr2 73677652 . T . PASS END=73677652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:33:37:0,33,1136:0,33,255:31,0 chr2 73677653 . C . PASS END=73677677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1210:0,84,255:34,0 chr2 73677678 . G . PASS END=73677678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1119:0,69,255:31,0 chr2 73677679 . T . PASS END=73677682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1108:0,85,255:33,0 chr2 73677683 . C . PASS END=73677683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr2 73677684 . T . PASS END=73677685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1194:0,86,255:33,0 chr2 73677686 . C . PASS END=73677686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr2 73677687 . C . PASS END=73677689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1186:0,86,255:33,0 chr2 73677690 . C . PASS END=73677690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:27,0 chr2 73677691 . A . PASS END=73677691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1062:0,44,255:27,1 chr2 73677692 . G . PASS END=73677697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:60:36:0,60,1149:0,60,255:32,1 chr2 73677698 . G . PASS END=73677698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:38:37:0,38,1259:0,38,255:29,1 chr2 73677699 . C . PASS END=73677701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:88:35:0,88,1195:0,88,255:31,0 chr2 73677702 . C . PASS END=73677703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:72:35:0,72,1180:0,72,255:33,1 chr2 73677704 . T . PASS END=73677711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1282:0,80,255:36,0 chr2 73677712 . C . PASS END=73677712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:32,0 chr2 73677713 . A . PASS END=73677715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1264:0,81,255:34,0 chr2 73677716 . T . PASS END=73677716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:34,0 chr2 73677717 . G . PASS END=73677776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:32:0,82,1119:0,82,255:35,0 chr2 73677777 . A . PASS END=73677777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1097:0,74,255:31,0 chr2 73677778 . C . PASS END=73677795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:33,0 chr2 73677796 . A . PASS END=73677832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:85:34:0,85,1166:0,85,255:37,0 chr2 73677833 . A G, 46.03 PASS DP=36;MQ=165.38;MQRankSum=-1.249;ReadPosRankSum=-1.379;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,14,0:0.389,0.000:36:10,7,0:12,7,0:45:81,0,50,472,734,1205:255,0,255:23,0:4.6033e+01,1.2995e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,7,7:10,12,6,8 chr2 73677834 . C . PASS END=73677897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:92:37:0,92,1445:0,92,255:40,0 chr2 73677898 . G C, 45.88 PASS DP=41;MQ=165.71;MQRankSum=-1.430;ReadPosRankSum=2.339;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,16,0:0.390,0.000:41:7,10,0:18,6,0:45:81,0,50,572,894,1466:255,0,255:22,0:4.5880e+01,1.3383e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,16,9,7:11,14,9,7 chr2 73677899 . T . PASS END=73677935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:40:0,104,1301:0,104,255:40,0 chr2 73677936 . T . PASS END=73678005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:40,0 chr2 73678006 . A . PASS END=73678006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:30,0 chr2 73678007 . G . PASS END=73678081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1278:0,81,255:40,0 chr2 73678082 . C . PASS END=73678082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr2 73678083 . T . PASS END=73678086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1300:0,81,255:39,0 chr2 73678087 . T . PASS END=73678087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1474:0,77,255:40,0 chr2 73678088 . T . PASS END=73678088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 73678089 . G . PASS END=73678089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1460:0,77,255:40,0 chr2 73678090 . G . PASS END=73678118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:42:0,82,1413:0,82,255:40,0 chr2 73678119 . G . PASS END=73678119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1390:0,57,255:38,0 chr2 73678120 . C . PASS END=73678120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1537:0,113,255:39,0 chr2 73678121 . C . PASS END=73678121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1429:0,52,255:38,0 chr2 73678122 . T . PASS END=73678235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:43:0,86,1477:0,86,255:40,0 chr2 73678236 . G . PASS END=73678236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:75:51:0,75,1634:0,75,255:40,0 chr2 73678237 . C . PASS END=73678521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:83:34:0,83,1236:0,83,255:40,0 chr2 73678522 . A . PASS END=73678522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:30,0 chr2 73678523 . G . PASS END=73678523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1166:0,85,255:30,0 chr2 73678524 . C . PASS END=73678524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:30,0 chr2 73678525 . C . PASS END=73678530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1264:0,92,255:33,0 chr2 73678531 . C . PASS END=73678531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1264:0,77,255:30,0 chr2 73678532 . T . PASS END=73678538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr2 73678539 . C . PASS END=73678540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 73678541 . G . PASS END=73678543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 73678544 . G . PASS END=73678544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:29,0 chr2 73678545 . G . PASS END=73678547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:31:0,66,990:0,69,255:26,0 chr2 73678548 . C . PASS END=73678568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1216:0,83,255:33,0 chr2 73678569 . A . PASS END=73678569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:31,0 chr2 73678570 . A . PASS END=73678589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1130:0,99,255:34,0 chr2 73678590 . G . PASS END=73678590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1135:0,63,255:33,0 chr2 73678591 . C . PASS END=73678667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:34:0,82,1288:0,82,255:38,0 chr2 73678668 . G . PASS END=73678668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1371:0,62,255:36,0 chr2 73678669 . T . PASS END=73678687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,101,255:37,0 chr2 73678688 . C . PASS END=73678688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr2 73678689 . C . PASS END=73678710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:34,0 chr2 73678711 . A . PASS END=73678711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr2 73678712 . A . PASS END=73678783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,89,255:37,0 chr2 73678784 . T . PASS END=73678784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,917:0,71,255:29,0 chr2 73678785 . T . PASS END=73679242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:36:0,92,1220:0,92,255:40,0 chr2 73679243 . G . PASS END=73679279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,134,255:40,0 chr2 73679280 . A G, 45.92 PASS DP=52;MQ=250.00;MQRankSum=6.009;ReadPosRankSum=3.884;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,20,0:0.385,0.000:52:23,11,0:9,9,0:45:81,0,50,715,1021,1737:255,0,255:32,0:4.5924e+01,1.3280e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,14,13,7:17,15,14,6 chr2 73679281 . T . PASS END=73679317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,118,1800:0,118,255:40,0 chr2 73679318 . A . PASS END=73679828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:41:0,90,1336:0,90,255:40,0 chr2 73679829 . C . PASS END=73679865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,142,255:40,0 chr2 73679866 . T C, 46.65 PASS DP=62;MQ=249.07;MQRankSum=6.630;ReadPosRankSum=1.363;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,25,0:0.403,0.000:62:24,13,0:13,12,0:46:81,0,50,853,1323,2176:255,0,255:34,0:4.6649e+01,1.1571e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,20,12,13:16,21,14,11 chr2 73679867 . T . PASS END=73679903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,154,255:40,0 chr2 73679904 . A . PASS END=73679952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,142,255:40,0 chr2 73679953 . A . PASS END=73679989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,135,255:40,0 chr2 73679990 . T A, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.771;ReadPosRankSum=2.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,35,0:0.556,0.000:63:19,14,0:9,21,0:48:85,0,49,1227,1001,2228:255,0,255:23,0:5.0000e+01,7.1187e-05,5.1943e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,19,16:22,6,24,11 chr2 73679991 . C . PASS END=73680027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,130,255:40,0 chr2 73680028 . C . PASS END=73680470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:42:0,81,1524:0,81,255:40,1 chr2 73680471 . G . PASS END=73680507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,149,255:40,0 chr2 73680508 . G C, 46.86 PASS DP=57;MQ=250.00;MQRankSum=6.352;ReadPosRankSum=1.635;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,23,0:0.404,0.000:57:17,11,0:17,12,0:46:82,0,50,788,1159,1947:255,0,255:33,0:4.6863e+01,1.1105e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,20,14,9:15,19,16,7 chr2 73680509 . T . PASS END=73680545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,141,255:40,0 chr2 73680546 . A . PASS END=73680688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:41:0,96,1472:0,96,255:40,0 chr2 73680689 . G . PASS END=73680689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1534:0,74,255:37,0 chr2 73680690 . A . PASS END=73681177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:32:0,83,1164:0,83,255:40,0 chr2 73681178 . C . PASS END=73681194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,68,255:26,0 chr2 73682274 . A . PASS END=73682274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 73682281 . C . PASS END=73682281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 73682283 . C . PASS END=73682283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 73682285 . C . PASS END=73682285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr2 73682289 . C . PASS END=73682423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:47:0,100,1530:0,100,255:40,0 chr2 73682425 . A . PASS END=73682425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 73682427 . A . PASS END=73682427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 73716753 . T . PASS END=73716753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 73716754 . C . PASS END=73716754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 73716759 . A . PASS END=73716759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 73716761 . G . PASS END=73717024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:28:0,80,1163:0,80,255:40,0 chr2 73717025 . C . PASS END=73717025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1440:0,79,255:40,0 chr2 73717026 . A . PASS END=73717529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:38:0,89,1380:0,89,255:40,0 chr2 73717530 . C . PASS END=73717566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:41:0,94,1530:0,94,255:40,0 chr2 73717567 . G T, 48.70 PASS DP=44;MQ=250.00;MQRankSum=5.615;ReadPosRankSum=0.687;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,19,0:0.432,0.000:44:12,7,0:13,12,0:46:83,0,47,183,183,183:255,0,255:21,0:4.8702e+01,1.0199e-04,5.0000e+01,1.8347e+02,2.1824e+02,1.8648e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,16,9,10:10,15,11,8 chr2 73717568 . G . PASS END=73717604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:38:0,89,1253:0,89,255:38,0 chr2 73717605 . A . PASS END=73717605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr2 73717606 . T . PASS END=73717606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr2 73717607 . A . PASS END=73717616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1395:0,110,255:37,0 chr2 73717617 . T . PASS END=73717617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 73717618 . T . PASS END=73717618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 73717619 . A . PASS END=73717655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:40:0,91,1405:0,91,255:40,0 chr2 73717656 . A G, 43.01 PASS DP=48;MQ=250.00;MQRankSum=5.669;ReadPosRankSum=2.673;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,17,0:0.354,0.000:48:15,6,0:16,11,0:43:78,0,50,608,990,1597:255,0,255:28,0:4.3009e+01,2.3893e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,15,14,3:16,15,9,8 chr2 73717657 . C . PASS END=73717693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:44:0,96,1576:0,96,255:40,0 chr2 73717694 . G . PASS END=73718626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:40:0,84,1235:0,84,255:40,1 chr2 73746887 . C . PASS END=73746887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 73746889 . C . PASS END=73746889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 73746902 . A . PASS END=73746922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:36:0,98,1327:0,98,255:40,0 chr2 73746923 . C T, 48.26 PASS DP=44;MQ=250.00;MQRankSum=5.615;ReadPosRankSum=3.199;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,19,0:0.432,0.000:44:18,12,0:7,7,0:47:83,0,50,640,886,1526:255,0,255:25,0:4.8257e+01,8.6719e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,8,17,2:16,9,12,7 chr2 73746924 . C . PASS END=73746960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,121,255:40,0 chr2 73746961 . C . PASS END=73747137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:42:0,93,1264:0,97,255:40,0 chr2 73747138 . C . PASS END=73747139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr2 73747140 . G . PASS END=73747143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:41:0,81,1215:0,90,255:27,0 chr2 73747148 . G . PASS END=73747148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 73760680 . G . PASS END=73760680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 73761938 . T . PASS END=73761938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 73761943 . C . PASS END=73761943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 73761945 . C . PASS END=73761945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 73761950 . G . PASS END=73762076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:85:35:0,85,1203:0,85,255:40,0 chr2 73762081 . T . PASS END=73762081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:40:0,96,1440:0,120,255:32,0 chr2 73777379 . C . PASS END=73777379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1357:0,108,255:36,0 chr2 73777381 . C . PASS END=73777381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1352:0,111,255:37,0 chr2 73777388 . C . PASS END=73777388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1465:0,114,255:38,0 chr2 73777394 . G . PASS END=73777565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:98:42:0,98,1393:0,98,255:40,0 chr2 73784336 . C . PASS END=73784337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 73784343 . C . PASS END=73784343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 73784346 . G . PASS END=73784354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 73784355 . G . PASS END=73784432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:30:0,84,1080:0,85,255:40,0 chr2 73784433 . G . PASS END=73784469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,695:0,63,255:26,0 chr2 73784470 . A . PASS END=73784481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr2 73784482 . G . PASS END=73784482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 73784484 . A . PASS END=73784484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 73786088 . C . PASS END=73786088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 73786094 . C . PASS END=73786094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 73786099 . A . PASS END=73786115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,955:0,75,255:26,0 chr2 73786116 . G . PASS END=73786119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:31,0 chr2 73786120 . C . PASS END=73786120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:31,0 chr2 73786121 . A . PASS END=73786270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:34:0,102,1236:0,102,255:40,0 chr2 73786272 . A . PASS END=73786272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 73786274 . T . PASS END=73786274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr2 73799380 . C . PASS END=73799380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 73799382 . T . PASS END=73799382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 73799389 . A . PASS END=73800584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1109:0,80,255:40,0 chr2 73826371 . A . PASS END=73826430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,127,255:40,0 chr2 73826525 . T . PASS END=73826525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:90:0,120,1800:0,255,255:40,0 chr2 73826528 . G . PASS END=73826648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:65:0,120,1800:0,162,255:40,0 chr2 73826654 . T . PASS END=73826654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 73827791 . A . PASS END=73827793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1145:0,80,255:30,0 chr2 73827798 . C . PASS END=73827798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 73827802 . C . PASS END=73827817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1182:0,99,255:38,0 chr2 73827818 . T . PASS END=73827818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:37,0 chr2 73827819 . G . PASS END=73828008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:38:0,81,1330:0,81,255:40,0 chr2 73828010 . T . PASS END=73828010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 73828311 . G . PASS END=73828311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 73828315 . C . PASS END=73828316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr2 73828318 . G . PASS END=73828318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 73828320 . A . PASS END=73828320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 73828322 . G . PASS END=73828323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr2 73828324 . G . PASS END=73828347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr2 73828348 . A . PASS END=73828356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,829:0,66,255:23,0 chr2 73828357 . T . PASS END=73828357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr2 73828358 . C . PASS END=73828358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr2 73828359 . T . PASS END=73828359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:22,0 chr2 73828360 . A . PASS END=73828416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,801:0,69,255:26,0 chr2 73828417 . C . PASS END=73828420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73828421 . T . PASS END=73828423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73828424 . C . PASS END=73828425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73828426 . A . PASS END=73828426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73828427 . A . PASS END=73828430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 73828431 . C . PASS END=73828433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:25,0 chr2 73828434 . A . PASS END=73828444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 73828445 . A . PASS END=73828445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 73828446 . G . PASS END=73828447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 73828448 . C . PASS END=73828461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 73828462 . A . PASS END=73828462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:25,0 chr2 73828463 . A . PASS END=73828463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:23,0 chr2 73828464 . C . PASS END=73828465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 73828466 . G . PASS END=73828469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 73828470 . G . PASS END=73828470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 73828471 . G . PASS END=73828480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 73828481 . T . PASS END=73828481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:27,0 chr2 73828482 . G . PASS END=73828487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:29,0 chr2 73828488 . T . PASS END=73828488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 73828489 . C . PASS END=73828500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 73828501 . G . PASS END=73828518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 73828519 . G . PASS END=73828524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 73828525 . A . PASS END=73828537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:20:0,57,855:0,60,255:19,0 chr2 73828538 . G A, 50.00 PASS DP=20;MQ=245.86;MQRankSum=0.718;ReadPosRankSum=3.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:9,2,0:1,8,0:48:85,0,50,358,350,707:255,0,255:10,0:5.0000e+01,6.5233e-05,5.3000e+01,3.5754e+02,3.8440e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,4,6:8,2,6,4 chr2 73828539 . G . PASS END=73828547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr2 73828548 . G . PASS END=73828550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 73828551 . A . PASS END=73828553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 73828554 . A . PASS END=73828564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 73828567 . C . PASS END=73828567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 73829304 . T . PASS END=73829304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 73829310 . A . PASS END=73829310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr2 73829312 . G . PASS END=73829326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 73829327 . C . PASS END=73829327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:22,0 chr2 73829328 . A . PASS END=73829335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,886:0,61,255:26,0 chr2 73829336 . G . PASS END=73829337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 73829338 . C . PASS END=73829338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 73829339 . T . PASS END=73829340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 73829341 . C . PASS END=73829341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 73829342 . A . PASS END=73829346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 73829347 . C . PASS END=73829347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 73829348 . C . PASS END=73829364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:36,0 chr2 73829365 . A . PASS END=73829365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:22:37:0,22,892:0,22,255:32,0 chr2 73829366 . A . PASS END=73829371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:89:35:0,89,1278:0,89,255:36,0 chr2 73829372 . C T, 49.96 PASS DP=37;MQ=225.78;MQRankSum=-1.109;ReadPosRankSum=0.471;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,0:0.486,0.000:37:11,9,0:8,9,0:47:85,0,47,185,185,185:255,0,255:17,0:4.9959e+01,8.7237e-05,5.0000e+01,1.8473e+02,2.1950e+02,1.8774e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,15,4,14:10,9,7,11 chr2 73829373 . T . PASS END=73829409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1311:0,95,255:40,0 chr2 73829410 . G . PASS END=73829460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1180:0,90,255:39,0 chr2 73829461 . C . PASS END=73829461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 73829462 . C . PASS END=73829464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 73829465 . C . PASS END=73829482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 73829483 . C . PASS END=73829491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:45:24:0,45,675:0,56,255:19,0 chr2 73829492 . A . PASS END=73829492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:24:0,36,540:0,72,255:12,0 chr2 73829493 . G . PASS END=73829495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:24:19:0,24,405:0,24,255:9,0 chr2 73830349 . C . PASS END=73830349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 73830353 . T . PASS END=73830354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 73830362 . G . PASS END=73830362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,184,255:40,0 chr2 73830365 . T . PASS END=73830431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,150,255:40,0 chr2 73835590 . G . PASS END=73835590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 73835596 . T . PASS END=73835596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 73835602 . G . PASS END=73835701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,120,1800:0,172,255:40,0 chr2 73835704 . C . PASS END=73835704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 73835706 . G . PASS END=73835706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 73836677 . C . PASS END=73836677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 73836681 . C . PASS END=73836681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 73836685 . T . PASS END=73836686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,144,255:40,0 chr2 73836695 . A . PASS END=73836739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,138,255:40,0 chr2 73836844 . A . PASS END=73836844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr2 73836850 . A . PASS END=73836850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 73836948 . A . PASS END=73836948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:39,0 chr2 73868072 . T . PASS END=73868084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:19,0 chr2 73868085 . A . PASS END=73868087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr2 73868088 . T . PASS END=73868091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:24,0 chr2 73868092 . A . PASS END=73868101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr2 73868102 . G . PASS END=73868290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1202:0,81,255:40,0 chr2 73868291 . T . PASS END=73868327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,106,1620:0,106,255:40,0 chr2 73868328 . A G, 49.75 PASS DP=53;MQ=166.08;MQRankSum=-3.719;ReadPosRankSum=1.137;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,32,0:0.604,0.000:53:7,16,0:14,16,0:45:85,0,44,185,185,185:255,0,255:20,0:4.9750e+01,1.3306e-04,4.6978e+01,1.8452e+02,2.1929e+02,1.8753e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,9,20,12:12,9,14,18 chr2 73868329 . A . PASS END=73868365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,123,255:40,0 chr2 73868366 . G . PASS END=73868524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1197:0,83,255:40,0 chr2 73868525 . A . PASS END=73868527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr2 73868528 . G . PASS END=73868528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 73868529 . A . PASS END=73868575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:26,0 chr2 73868576 . C . PASS END=73868576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 73868577 . C . PASS END=73868586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 73868587 . A . PASS END=73868618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,53,255:19,0 chr2 73868619 . A . PASS END=73868622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 73868623 . G . PASS END=73868631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,630:0,40,255:15,0 chr2 73868632 . T . PASS END=73868638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 73868639 . C . PASS END=73868650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 73868651 . T . PASS END=73868666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr2 73868667 . G . PASS END=73868678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 73868679 . G . PASS END=73868692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr2 73868693 . G . PASS END=73868693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr2 73868694 . A . PASS END=73868694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 73868695 . G . PASS END=73868748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr2 73868749 . G . PASS END=73868755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 73927754 . G . PASS END=73927756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 73927757 . G . PASS END=73927760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 73927761 . T . PASS END=73927893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:30:0,80,1133:0,80,255:39,0 chr2 73927894 . A . PASS END=73927894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1474:0,107,255:36,0 chr2 73927895 . T . PASS END=73927895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1404:0,68,255:35,0 chr2 73927896 . G . PASS END=73927930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,99,1443:0,104,255:39,0 chr2 73927931 . A G, 49.75 PASS DP=42;MQ=172.27;MQRankSum=-2.692;ReadPosRankSum=4.025;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,21,0:0.500,0.000:42:11,13,0:10,8,0:48:85,0,50,714,714,1429:255,0,255:19,0:4.9750e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,9,7,14:10,11,15,6 chr2 73927932 . G . PASS END=73927942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1438:0,120,255:40,0 chr2 73927943 . A . PASS END=73927943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1114:0,70,255:35,0 chr2 73927944 . C . PASS END=73927968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1449:0,90,255:40,0 chr2 73927969 . T . PASS END=73928060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:39:0,92,1407:0,92,255:40,0 chr2 73928061 . A . PASS END=73928097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,108,1446:0,110,255:40,0 chr2 73928098 . C G, 50.00 PASS DP=40;MQ=203.33;MQRankSum=-2.421;ReadPosRankSum=3.963;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:11,15,0:9,5,0:48:85,0,50,634,715,1349:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,10,10:12,8,7,13 chr2 73928099 . C . PASS END=73928135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:96:40:0,96,1354:0,96,255:40,0 chr2 73928136 . T . PASS END=73928328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:41:0,91,1474:0,91,255:40,0 chr2 73928329 . C . PASS END=73928365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:80:42:0,80,1471:0,80,255:40,0 chr2 73928366 . G C, 44.97 PASS DP=45;MQ=213.36;MQRankSum=1.126;ReadPosRankSum=1.458;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,16,0:0.356,0.000:45:13,8,0:16,8,0:44:80,0,47,180,180,180:255,0,255:26,0:4.4967e+01,1.8172e-04,5.0000e+01,1.7974e+02,2.1451e+02,1.8275e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,17,6,10:18,11,8,8 chr2 73928367 . G . PASS END=73928375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:39,0 chr2 73928376 . G . PASS END=73928376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1369:0,71,255:35,0 chr2 73928377 . C . PASS END=73928392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1404:0,87,255:38,0 chr2 73928393 . G . PASS END=73928393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr2 73928394 . G . PASS END=73928398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1271:0,99,255:33,0 chr2 73928399 . T . PASS END=73928399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1097:0,68,255:29,0 chr2 73928400 . C . PASS END=73928403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1200:0,83,255:29,0 chr2 73928404 . T . PASS END=73928408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:29,0 chr2 73928409 . T . PASS END=73928409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,890:0,73,255:28,0 chr2 73928410 . T . PASS END=73928412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 73928413 . C . PASS END=73928432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,914:0,62,255:26,0 chr2 73957070 . T . PASS END=73957086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:63:0,120,1800:0,120,255:40,0 chr2 73957087 . T . PASS END=73957123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,184,255:40,0 chr2 73957124 . A G, 46.84 PASS DP=77;MQ=250.00;MQRankSum=7.401;ReadPosRankSum=3.786;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,31,0:0.403,0.000:77:23,15,0:23,16,0:46:82,0,50,1085,1609,2693:255,0,255:40,0:4.6839e+01,1.1157e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,24,10,21:17,29,14,17 chr2 73957125 . A . PASS END=73957156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,175,255:40,0 chr2 73957687 . C . PASS END=73957837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:45:0,120,1800:0,122,255:40,0 chr2 73957838 . C . PASS END=73957863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,101,1622:0,101,255:40,1 chr2 73959290 . A . PASS END=73959412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,154,255:40,2 chr2 73961556 . C . PASS END=73961556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr2 73961557 . A . PASS END=73961557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 73961558 . C . PASS END=73961696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1033:0,86,255:40,0 chr2 73989788 . T . PASS END=73989946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:82:32:0,82,1305:0,82,255:40,0 chr2 73989947 . A . PASS END=73989961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:25,0 chr2 73989962 . A . PASS END=73989973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,52,255:19,0 chr2 73989974 . C . PASS END=73989974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 73989975 . T . PASS END=73989975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,657:0,30,255:18,0 chr2 73989976 . C . PASS END=73989979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 73989980 . A . PASS END=73989980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 73989981 . A . PASS END=73989986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 73993545 . C . PASS END=73993721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:37:0,101,1530:0,101,255:40,0 chr2 73993955 . T . PASS END=73994030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:70:0,120,1800:0,194,255:40,2 chr2 73994288 . A . PASS END=73994334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,134,255:40,0 chr2 73996392 . C . PASS END=73996452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:86:34:0,86,1210:0,86,255:40,0 chr2 74000599 . T . PASS END=74000624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,173,255:40,0 chr2 74000927 . C . PASS END=74001050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:70:0,120,1800:0,155,255:40,0 chr2 74002040 . C . PASS END=74002040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 74002041 . T . PASS END=74002171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:90:30:0,90,1125:0,90,255:40,0 chr2 74005428 . C . PASS END=74005503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,145,255:40,0 chr2 74007001 . C . PASS END=74007014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 74007015 . G . PASS END=74007024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:13,0 chr2 74007025 . T . PASS END=74007025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 74007026 . T . PASS END=74007026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 74007027 . C . PASS END=74007059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:19,0 chr2 74007060 . T . PASS END=74007075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,770:0,66,255:26,0 chr2 74007076 . C . PASS END=74007086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 74007087 . A . PASS END=74007089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74007090 . C . PASS END=74007098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:32,0 chr2 74007099 . C . PASS END=74007127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1148:0,99,255:33,0 chr2 74007128 . A . PASS END=74007135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr2 74007136 . T C, 49.96 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=3.295;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:9,4,0:6,10,0:48:85,0,50,490,508,997:255,0,255:15,0:4.9958e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,5,9:9,6,7,7 chr2 74007137 . C . PASS END=74007143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 74007144 . A . PASS END=74007144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr2 74007145 . A . PASS END=74007148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74007149 . C . PASS END=74007161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,68,255:25,0 chr2 74007162 . C . PASS END=74007162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 74007163 . T . PASS END=74007168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 74007169 . C . PASS END=74007173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 74007174 . A . PASS END=74007188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,643:0,51,255:19,0 chr2 74007189 . G . PASS END=74007189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 74007190 . G . PASS END=74007200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,623:0,54,255:18,0 chr2 74007201 . G . PASS END=74007201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 74007202 . C . PASS END=74007207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr2 74007208 . C . PASS END=74007228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:11:0,30,450:0,33,255:13,0 chr2 74007229 . T . PASS END=74007242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 74011437 . A . PASS END=74011445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 74011446 . T . PASS END=74011463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr2 74011464 . A . PASS END=74011464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 74011465 . C . PASS END=74011475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 74011476 . A . PASS END=74011476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,459:0,18,255:14,0 chr2 74011477 . T . PASS END=74011480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,570:0,54,255:18,0 chr2 74011481 . C . PASS END=74011481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,501:0,37,255:16,0 chr2 74011482 . T . PASS END=74011482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr2 74011483 . C G, 0.01 DRAGENSnpHardQUAL DP=18;MQ=18.07;MQRankSum=1.077;ReadPosRankSum=2.482;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:12,6,0:0.333,0.000:18:9,3,0:3,3,0:28:7,0,32,42,335,377:43,0,255:12,0:7.5878e-03,2.7582e+01,6.2582e+01,6.9512e+01,3.9715e+02,4.0731e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,6,0:3,9,3,3 chr2 74011484 . T . PASS END=74011485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 74011486 . C . PASS END=74011486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:23:19:0,23,484:0,23,255:15,0 chr2 74011487 . T . PASS END=74011497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 74011498 . C . PASS END=74011498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr2 74011499 . T . PASS END=74011499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 74011500 . G . PASS END=74011500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 74011501 . C . PASS END=74011509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr2 74011510 . T . PASS END=74011510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 74011511 . T . PASS END=74011518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 74011519 . C . PASS END=74011519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr2 74011520 . T . PASS END=74011520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 74011521 . C . PASS END=74011521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 74011522 . T . PASS END=74011522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:10,0 chr2 74011523 . G . PASS END=74011527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 74011528 . T . PASS END=74011529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:11:0,22,388:0,22,255:9,0 chr2 74011530 . T . PASS END=74011530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 74011531 . C . PASS END=74011533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,405:0,20,255:9,0 chr2 74035932 . A . PASS END=74035958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr2 74035959 . A . PASS END=74035965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr2 74035966 . C . PASS END=74035966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 74035967 . T . PASS END=74035970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74035971 . A . PASS END=74035971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:12,0 chr2 74035972 . T . PASS END=74035972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74035973 . C . LowGQ END=74035973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,363:15,0,255:11,0 chr2 74035974 . G . PASS END=74035974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 74035975 . T . PASS END=74035975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 74035976 . C . LowGQ END=74035976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,382:21,0,255:10,0 chr2 74035977 . T . PASS END=74035977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74035978 . C . LowGQ END=74035978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,373:16,0,255:11,0 chr2 74035979 . T . PASS END=74035980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74035981 . C . LowGQ END=74035981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,388:2,0,255:11,0 chr2 74035982 . T . PASS END=74035982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74035983 . T . PASS END=74035983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr2 74035984 . C . PASS END=74035996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,474:0,42,255:16,0 chr2 74035997 . A . PASS END=74035997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 74035998 . G . PASS END=74035998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 74035999 . T . PASS END=74035999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:15,0 chr2 74036000 . T . PASS END=74036004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr2 74036005 . T . PASS END=74036005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr2 74036006 . T . PASS END=74036012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 74036013 . T . PASS END=74036013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:13,0 chr2 74036014 . C . PASS END=74036028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 74040604 . A . PASS END=74040604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:15,0 chr2 74040605 . A . PASS END=74040610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,584:0,51,255:18,0 chr2 74040611 . C . PASS END=74040611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 74040612 . C . PASS END=74040620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,645:0,43,255:19,0 chr2 74040621 . T . PASS END=74040621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:20,0 chr2 74040622 . C . PASS END=74040623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74040624 . T . PASS END=74040624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 74040625 . T . PASS END=74040631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 74040632 . A . PASS END=74040633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74040634 . C . PASS END=74040637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74040638 . A . PASS END=74040638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 74040639 . A . PASS END=74040639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 74040640 . A . PASS END=74040640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:21,0 chr2 74040641 . T . PASS END=74040656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:26,0 chr2 74040657 . C . PASS END=74040659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74040660 . C . PASS END=74040662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 74040663 . G . PASS END=74040665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74040666 . G . PASS END=74040679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,939:0,64,255:26,0 chr2 74040680 . T . PASS END=74040681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74040682 . T . PASS END=74040682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 74040683 . C . PASS END=74040684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 74040685 . T . PASS END=74040685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 74040686 . A . PASS END=74040701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1048:0,84,255:31,0 chr2 74040702 . A . PASS END=74040702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:29,0 chr2 74040703 . A . PASS END=74040705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 74040706 . T . PASS END=74040706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 74040707 . C . PASS END=74040710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74040711 . A . PASS END=74040711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 74040712 . G . PASS END=74040712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74040713 . A . PASS END=74040713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74040714 . G . PASS END=74040716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 74040717 . T . PASS END=74040719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1114:0,63,255:26,0 chr2 74040720 . G . PASS END=74040726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,83,255:27,0 chr2 74040727 . C . PASS END=74040727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74040728 . C . PASS END=74040730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74040731 . C . PASS END=74040732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:28,0 chr2 74040733 . G . PASS END=74040737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74040738 . G . PASS END=74040738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1067:0,60,255:27,0 chr2 74040739 . C . PASS END=74040739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74040740 . A . PASS END=74040741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1125:0,63,255:25,0 chr2 74040742 . G . PASS END=74040742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 74040743 . G . PASS END=74040745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 74040746 . A . PASS END=74040746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:25,0 chr2 74040747 . C . PASS END=74040749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74040750 . C . PASS END=74041138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:30:0,80,898:0,80,255:40,0 chr2 74041139 . C . PASS END=74041139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:29,0 chr2 74041140 . T . PASS END=74041146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:32,0 chr2 74041147 . A . PASS END=74041147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:31,0 chr2 74041148 . T . PASS END=74041304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1301:0,87,255:40,0 chr2 74041305 . A . PASS END=74041322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:25:0,66,990:0,75,255:26,0 chr2 74041323 . T . PASS END=74041323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,755:0,58,255:22,0 chr2 74041324 . C . PASS END=74041343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,847:0,69,255:23,0 chr2 74041344 . A . PASS END=74041353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr2 74042198 . T . PASS END=74042214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,915:0,75,255:26,0 chr2 74042215 . G . PASS END=74042223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 74042224 . A . PASS END=74042224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:27,0 chr2 74042225 . C . PASS END=74043339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:30:0,80,1003:0,80,255:40,0 chr2 74043340 . A . PASS END=74043340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1409:0,79,255:38,0 chr2 74043341 . A . PASS END=74043366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:41:0,90,1395:0,90,255:40,0 chr2 74043367 . C . PASS END=74043367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1502:0,74,255:35,0 chr2 74043368 . C . PASS END=74044119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:38:0,81,1260:0,81,255:40,0 chr2 74057984 . A . PASS END=74057989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 74057990 . G . PASS END=74057994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 74057995 . T . PASS END=74057999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74058000 . A . PASS END=74058019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:33,0 chr2 74058020 . G . PASS END=74058020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:34,0 chr2 74058021 . A . PASS END=74058157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1173:0,81,255:40,0 chr2 74058158 . G . PASS END=74058159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 74058160 . C . PASS END=74058160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 74058161 . T . PASS END=74058164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 74058165 . T . PASS END=74058167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr2 74058168 . T . PASS END=74058186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:25,0 chr2 74071940 . G . PASS END=74072015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:98:0,120,1800:0,255,255:40,0 chr2 74072020 . G . PASS END=74072020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 74072294 . A . PASS END=74072389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:60:0,120,1800:0,164,255:40,0 chr2 74074514 . A . PASS END=74074527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:26,0 chr2 74074528 . G . PASS END=74074535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,968:0,81,255:30,0 chr2 74074536 . C . PASS END=74074536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:28,0 chr2 74074537 . C . PASS END=74074636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1094:0,90,255:40,0 chr2 74074637 . G . PASS END=74074642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1000:0,70,255:26,0 chr2 74074643 . A . PASS END=74074643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:23,0 chr2 74074644 . T . PASS END=74074658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,969:0,65,255:26,0 chr2 74074659 . T . PASS END=74074664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 74074665 . A . PASS END=74074699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,65,255:26,0 chr2 74074700 . G . PASS END=74074700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:24,0 chr2 74074701 . T . PASS END=74074703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 74074704 . A . PASS END=74074706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74074707 . C . PASS END=74074708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:24,0 chr2 74074709 . G . PASS END=74074741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,86,255:31,0 chr2 74074742 . A . PASS END=74074742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,968:0,70,255:26,0 chr2 74074743 . A . PASS END=74074746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74074747 . C . PASS END=74074748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 74074749 . C . PASS END=74074843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1243:0,89,255:38,0 chr2 74074844 . T . PASS END=74074844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 74074845 . C . PASS END=74074847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 74074848 . T . PASS END=74074864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:25,0 chr2 74074865 . A . PASS END=74074865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 74074866 . G . PASS END=74074867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74074868 . A . PASS END=74074874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 74074875 . A . PASS END=74074880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:20,0 chr2 74076490 . T . PASS END=74076492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr2 74076493 . C . PASS END=74076493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 74076494 . C . PASS END=74076514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1094:0,90,255:32,0 chr2 74076515 . T . PASS END=74076515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:31,0 chr2 74076516 . G . PASS END=74076584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:35:0,84,1356:0,84,255:40,0 chr2 74076585 . G . PASS END=74076589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1250:0,81,255:30,0 chr2 74076590 . A . PASS END=74076594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,81,255:26,0 chr2 74076595 . G . PASS END=74076595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1105:0,50,255:23,0 chr2 74076596 . A . PASS END=74076600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,86,255:25,0 chr2 74076601 . T . PASS END=74076601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:22,0 chr2 74076602 . C . PASS END=74076603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 74076604 . G . PASS END=74076604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:21,0 chr2 74076605 . T . PASS END=74076606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:23,0 chr2 74076607 . G . PASS END=74076607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,803:0,50,255:19,0 chr2 74076608 . A . PASS END=74076614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:26:0,60,900:0,64,255:21,0 chr2 74077503 . A . PASS END=74077506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 74077507 . G . PASS END=74077526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:38,0 chr2 74077527 . C . PASS END=74077527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:37,0 chr2 74077528 . A . PASS END=74077635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,93,255:40,0 chr2 74077636 . T . PASS END=74077640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 74080162 . G . PASS END=74080167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,479:0,48,255:16,0 chr2 74086381 . A . PASS END=74086493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:41:0,98,1367:0,98,255:40,0 chr2 74087173 . T . PASS END=74087173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr2 74087179 . A . PASS END=74087252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:78:0,120,1800:0,208,255:40,0 chr2 74087253 . A . PASS END=74087278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,186,255:40,0 chr2 74087661 . C . PASS END=74087675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,215,255:40,0 chr2 74089330 . A . PASS END=74089386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:33:0,90,1350:0,99,255:40,0 chr2 74128439 . A . PASS END=74128440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 74128441 . G . PASS END=74128446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1080:0,84,255:30,0 chr2 74128447 . A . PASS END=74128447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:28,0 chr2 74128448 . G . PASS END=74128448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr2 74128449 . A . PASS END=74128449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,926:0,73,255:29,0 chr2 74128450 . G . PASS END=74128483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1047:0,83,255:36,0 chr2 74128484 . G . PASS END=74128499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:94:37:0,94,1260:0,94,255:37,0 chr2 74128500 . G . PASS END=74128500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr2 74128501 . C . PASS END=74128527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:39:0,85,1380:0,85,255:39,0 chr2 74128528 . T . PASS END=74128528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1394:0,65,255:36,0 chr2 74128529 . G . PASS END=74128597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,99,1565:0,99,255:40,0 chr2 74129487 . G . PASS END=74129511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,111,1665:0,120,255:40,0 chr2 74129512 . A . PASS END=74129615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,158,255:40,0 chr2 74129751 . C . PASS END=74129855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,162,255:40,0 chr2 74135417 . C . PASS END=74135417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1280:0,92,255:32,0 chr2 74135418 . C . PASS END=74135475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1186:0,83,255:35,0 chr2 74135476 . T . PASS END=74135479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:25,0 chr2 74135800 . A . PASS END=74135801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 74135802 . C . PASS END=74135802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 74135803 . T . PASS END=74135830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:25,0 chr2 74135831 . G . PASS END=74135834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74135835 . A . PASS END=74135843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 74135844 . A . PASS END=74135844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:30,0 chr2 74135845 . G . PASS END=74135860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:32:0,90,1350:0,96,255:39,0 chr2 74135861 . T . PASS END=74135897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,120,1800:0,122,255:40,0 chr2 74135898 . A G, 49.84 PASS DP=46;MQ=250.00;MQRankSum=5.794;ReadPosRankSum=2.386;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,22,0:0.478,0.000:46:13,10,0:11,12,0:48:85,0,50,787,858,1645:255,0,255:22,0:4.9837e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,8,12,10:11,13,8,14 chr2 74135899 . A . PASS END=74135935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,120,1800:0,131,255:40,0 chr2 74135936 . C . PASS END=74135978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,144,255:40,0 chr2 74136182 . A . PASS END=74136266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:34:0,80,1260:0,80,255:40,0 chr2 74140612 . G . PASS END=74140618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:17,0 chr2 74140619 . C . PASS END=74140654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:19,0 chr2 74140655 . C . PASS END=74140691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,831:0,63,255:26,0 chr2 74140692 . C . PASS END=74140711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr2 74140712 . T . PASS END=74140737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,878:0,61,255:25,0 chr2 74140738 . T . PASS END=74140750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:18:0,40,576:0,40,255:19,0 chr2 74140751 . A . PASS END=74140751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:15,0 chr2 74140752 . G . PASS END=74140758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:17,0 chr2 74140759 . C . PASS END=74140759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 74140760 . C . PASS END=74140773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 74141807 . C . PASS END=74141807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 74141808 . T . PASS END=74141808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 74141809 . G . PASS END=74141811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 74141812 . A . PASS END=74141812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr2 74141813 . G . PASS END=74141813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 74141814 . A . PASS END=74141814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr2 74141815 . G . PASS END=74141816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 74141817 . A . PASS END=74141818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 74141819 . T . PASS END=74141827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:9,0 chr2 74141828 . A . PASS END=74141832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 74141833 . A . LowGQ END=74141833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,274:1,0,255:9,0 chr2 74141834 . A . PASS END=74141857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 74141858 . T . PASS END=74141858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr2 74141859 . G . PASS END=74141869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,297:0,30,255:10,0 chr2 74141870 . A . PASS END=74141882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 74141883 . A . PASS END=74141885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 74141886 . A . PASS END=74141886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 74141887 . G . PASS END=74141893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:9:0,10,263:0,10,255:6,0 chr2 74141894 . C . PASS END=74141903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr2 74141904 . G . PASS END=74141907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 74141908 . A . PASS END=74141909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74141910 . G . PASS END=74141915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74141916 . T . PASS END=74141916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 74141917 . G . PASS END=74141928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 74141929 . G . PASS END=74141929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 74141930 . G . PASS END=74141963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,394:0,33,255:12,0 chr2 74141964 . C . PASS END=74141998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:20:8:0,20,280:0,20,255:9,0 chr2 74143711 . G . PASS END=74143868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:32:0,84,1303:0,84,255:40,2 chr2 74143869 . G . PASS END=74143877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:25,0 chr2 74143878 . A . PASS END=74143890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:47:21:0,47,729:0,47,255:19,0 chr2 74143891 . A . PASS END=74143892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 74146559 . A . PASS END=74146573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,278:0,24,255:8,0 chr2 74146574 . G . PASS END=74146588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr2 74146589 . G . PASS END=74146602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr2 74146603 . C . PASS END=74146603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr2 74146604 . T . PASS END=74146612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:18,0 chr2 74146613 . G . PASS END=74146614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 74146615 . C . PASS END=74146615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74146616 . T . PASS END=74146616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 74146617 . C . PASS END=74146644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr2 74146645 . C . PASS END=74146645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 74146646 . A . PASS END=74146672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:17,0 chr2 74146673 . C . PASS END=74146674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74146675 . C . PASS END=74146677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74146678 . C . PASS END=74146678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 74146679 . A . PASS END=74146679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74146680 . T . PASS END=74146680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74146681 . T . PASS END=74146681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr2 74146682 . G . PASS END=74146689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 74146690 . G . PASS END=74146690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74146691 . A . PASS END=74146691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 74146692 . A . PASS END=74146697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74146698 . T . PASS END=74146702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 74153976 . C . PASS END=74153976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 74153984 . C . PASS END=74153984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1213:0,99,255:33,0 chr2 74154017 . G . PASS END=74154017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 74154030 . T . PASS END=74154030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 74154037 . G . PASS END=74154037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 74154038 . A . PASS END=74154038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1078:0,52,255:28,0 chr2 74154039 . T . PASS END=74154075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1109:0,90,255:33,0 chr2 74154076 . A . PASS END=74154078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:25,0 chr2 74154079 . C . PASS END=74154089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:28,0 chr2 74154090 . T . PASS END=74154118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 74154119 . T . PASS END=74154119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 74154120 . C . PASS END=74154155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr2 74154156 . G . PASS END=74154156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:20,0 chr2 74154157 . G . PASS END=74154160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:20,0 chr2 74154161 . T . PASS END=74154180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 74166033 . G . PASS END=74166033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 74166037 . C . PASS END=74166053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1127:0,84,255:31,0 chr2 74166054 . T . PASS END=74166054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1076:0,66,255:31,0 chr2 74166055 . T . PASS END=74166090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:33:0,92,1122:0,92,255:38,0 chr2 74166091 . A . PASS END=74166091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr2 74166092 . C . PASS END=74166102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:37,0 chr2 74166103 . A . PASS END=74166103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:33,0 chr2 74166104 . A . PASS END=74166145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,86,255:34,0 chr2 74166146 . A . PASS END=74166146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 74166147 . A . PASS END=74166147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74166148 . A . PASS END=74166148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr2 74166149 . A . PASS END=74166149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74166151 . T . PASS END=74166151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 74173839 . C . PASS END=74173840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,731:0,63,255:23,0 chr2 74173846 . G . PASS END=74174033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:34:0,81,1215:0,102,255:40,0 chr2 74174034 . G . PASS END=74174034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 74177636 . T . PASS END=74177636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:78:0,120,1800:0,179,255:40,2 chr2 74177701 . C . PASS END=74177701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 74177712 . G . PASS END=74177859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:36:0,87,1305:0,95,255:40,0 chr2 74184242 . T . PASS END=74184242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 74184252 . G . PASS END=74184252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 74184253 . T . PASS END=74184253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,695:0,55,255:23,0 chr2 74184254 . T . PASS END=74184264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,804:0,72,255:25,0 chr2 74184265 . G . PASS END=74184268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:29,0 chr2 74184269 . G . PASS END=74184269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 74184270 . T . PASS END=74184298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:31:0,82,1050:0,82,255:33,0 chr2 74184299 . A . PASS END=74184299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:32,0 chr2 74184300 . A . PASS END=74184300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 74184301 . T . PASS END=74184301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1017:0,52,255:30,0 chr2 74184302 . T . PASS END=74184305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1107:0,85,255:33,0 chr2 74184306 . C . PASS END=74184306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr2 74184307 . T . PASS END=74184308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1239:0,89,255:32,0 chr2 74184309 . G . PASS END=74184309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:32,0 chr2 74184310 . C . PASS END=74184334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 74184335 . A . PASS END=74184335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr2 74184336 . C . PASS END=74184342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74184343 . C . PASS END=74184369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 74185270 . T . PASS END=74185270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 74185273 . G . PASS END=74185285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1049:0,87,255:33,0 chr2 74185286 . G . PASS END=74185286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr2 74185287 . C . PASS END=74185372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:34:0,102,1242:0,102,255:40,0 chr2 74185827 . C . PASS END=74185827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 74185837 . G . PASS END=74185838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 74185839 . A . PASS END=74185863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,195,255:40,0 chr2 74185870 . C . PASS END=74185870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr2 74185983 . G . PASS END=74185983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 74186065 . C . PASS END=74186065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,241,255:40,0 chr2 74213531 . A . PASS END=74213547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 74213548 . G . PASS END=74213571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1086:0,87,255:37,0 chr2 74213572 . G . PASS END=74213572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:36,0 chr2 74213573 . C . PASS END=74213573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1366:0,111,255:37,0 chr2 74213574 . C . PASS END=74213574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:35,0 chr2 74213575 . A . PASS END=74213750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1095:0,80,255:40,0 chr2 74213751 . G . PASS END=74213751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 74213752 . C . PASS END=74213773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 74213774 . C . PASS END=74213787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:25:0,61,860:0,61,255:24,0 chr2 74213788 . G . PASS END=74213788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 74213789 . C . PASS END=74213791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 74213792 . A . PASS END=74213792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:21,0 chr2 74213793 . A . PASS END=74213796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 74213797 . T . PASS END=74213800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:22,0 chr2 74213801 . G . PASS END=74213810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:20:0,52,768:0,52,255:19,0 chr2 74213811 . A . PASS END=74213818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr2 74213819 . G . PASS END=74213833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 74229905 . A . PASS END=74229906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 74229907 . G . PASS END=74229911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr2 74229912 . A . PASS END=74229912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 74229913 . G . PASS END=74229920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 74229921 . C . PASS END=74229921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 74229922 . G . PASS END=74229923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74229924 . C . PASS END=74229928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 74230237 . G . PASS END=74230293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:38,0 chr2 74273405 . A . PASS END=74273405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr2 74273406 . C . PASS END=74273406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:20,0 chr2 74273407 . A . PASS END=74273413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,762:0,63,255:24,0 chr2 74273414 . G . PASS END=74273414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 74273415 . A . PASS END=74273425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,894:0,62,255:25,0 chr2 74273426 . G . PASS END=74273426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 74273427 . T . PASS END=74273427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 74273428 . T . PASS END=74273428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 74273429 . G . PASS END=74273430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 74273431 . T . PASS END=74273431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,837:0,36,255:24,0 chr2 74273432 . G . PASS END=74273436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 74273437 . T . PASS END=74273437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 74273438 . G . PASS END=74273443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 74273444 . G . PASS END=74273444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 74273445 . G . PASS END=74273452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr2 74273453 . G . PASS END=74273453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74273454 . A . PASS END=74273455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 74273456 . T . PASS END=74273456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,988:0,51,255:27,0 chr2 74273457 . C . PASS END=74273458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 74273459 . G . PASS END=74273469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,80,255:26,0 chr2 74273470 . C . PASS END=74273474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 74273475 . G . PASS END=74273475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 74273476 . G . PASS END=74273483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 74273484 . G . PASS END=74273484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 74273485 . G . PASS END=74273506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1140:0,80,255:31,0 chr2 74273507 . C . PASS END=74273507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1065:0,62,255:29,0 chr2 74273508 . C . PASS END=74273514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 74273515 . T . PASS END=74273516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74273517 . G . PASS END=74273527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1101:0,93,255:31,0 chr2 74273528 . C . PASS END=74273528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 74273529 . C . PASS END=74273533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr2 74273534 . G . PASS END=74273549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr2 74273550 . G . PASS END=74273552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 74273553 . C . PASS END=74273553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74273554 . T . PASS END=74273554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:26,0 chr2 74273555 . G . PASS END=74273581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:26:0,71,954:0,71,255:26,0 chr2 74273582 . C . PASS END=74273595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr2 74273596 . T . PASS END=74273626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr2 74273627 . G . PASS END=74273639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1001:0,84,255:28,0 chr2 74273640 . A . PASS END=74273666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr2 74273667 . A . PASS END=74273667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 74273668 . A . PASS END=74273691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr2 74273692 . T . PASS END=74273692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,759:0,50,255:24,0 chr2 74273693 . A . PASS END=74273693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 74273694 . G . PASS END=74273694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:24,0 chr2 74273695 . C . PASS END=74273700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 74273701 . G . PASS END=74273701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 74273702 . C . PASS END=74273703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr2 74273704 . C . PASS END=74273705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 74273706 . A . PASS END=74273728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1049:0,80,255:32,0 chr2 74273729 . A . PASS END=74273729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 74273730 . G . PASS END=74273732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 74273733 . G . PASS END=74273733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 74273734 . T . PASS END=74273736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74273737 . G . PASS END=74273737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:27,0 chr2 74273738 . G . PASS END=74273739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74273740 . T . PASS END=74273745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74273746 . C . PASS END=74273746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74273747 . A . PASS END=74273803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,891:0,67,255:25,0 chr2 74273804 . G . PASS END=74273804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 74273805 . A . PASS END=74273838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,847:0,69,255:25,0 chr2 74273839 . T . PASS END=74273844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr2 74273845 . G . PASS END=74273850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:21,0 chr2 74273851 . A . PASS END=74273863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr2 74273864 . T . PASS END=74273866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74273867 . G . PASS END=74273890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:19,0 chr2 74273891 . C . PASS END=74273891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 74273892 . T . PASS END=74273908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 74273909 . A . PASS END=74273918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74273919 . C . PASS END=74273930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr2 74273931 . A . PASS END=74273931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 74273932 . A . PASS END=74273938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 74273939 . G . PASS END=74273939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 74273940 . A . PASS END=74273940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74273941 . G . PASS END=74273941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,443:0,15,255:13,0 chr2 74273942 . G . PASS END=74273942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,474:0,9,255:14,0 chr2 74273943 . A . PASS END=74273943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74273944 . G . PASS END=74273944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr2 74273945 . C . PASS END=74273964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:15:0,41,560:0,41,255:16,0 chr2 74273965 . T . PASS END=74273965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr2 74273966 . C . PASS END=74273976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 74273977 . T . PASS END=74273977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 74273978 . G . PASS END=74273984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 74273985 . G . PASS END=74273993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 74273994 . C . PASS END=74274026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:19,0 chr2 74274027 . T . PASS END=74274030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 74274031 . C . PASS END=74274031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 74274032 . C . PASS END=74274034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 74274035 . A . PASS END=74274035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 74274036 . T . PASS END=74274039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,740:0,66,255:23,0 chr2 74274040 . T . PASS END=74274040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 74274041 . C . PASS END=74274043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 74274044 . C . PASS END=74274056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr2 74274057 . C . PASS END=74274057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 74274058 . C . PASS END=74274132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1092:0,83,255:35,0 chr2 74274133 . C . PASS END=74274133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:31,0 chr2 74274134 . A . PASS END=74274153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1186:0,83,255:33,0 chr2 74274154 . C . PASS END=74274154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 74274155 . C . PASS END=74274156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74274157 . G . PASS END=74274168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1000:0,70,255:24,0 chr2 74274169 . T . PASS END=74274169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr2 74274170 . T . PASS END=74274172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 74274173 . A . PASS END=74274173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 74274174 . C . PASS END=74274174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 74274175 . C . PASS END=74274175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:23,0 chr2 74274176 . C . PASS END=74274179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 74274180 . A . PASS END=74274180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:6:24:0,6,693:0,6,255:18,0 chr2 74274181 . G . PASS END=74274182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 74274183 . C . PASS END=74274183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,767:0,17,255:20,0 chr2 74274184 . T . PASS END=74274184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,767:0,25,255:18,0 chr2 74274185 . T . PASS END=74274185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,71,255:20,0 chr2 74274186 . C . PASS END=74274192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,729:0,49,255:19,0 chr2 74274193 . C . PASS END=74274194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 74274195 . T . PASS END=74274195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 74274196 . T . PASS END=74274199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 74274200 . G . PASS END=74274201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:21:0,46,684:0,46,255:20,0 chr2 74274202 . G . PASS END=74274205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74274206 . T . PASS END=74274210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:19,0 chr2 74274211 . A . PASS END=74274211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,718:0,33,255:18,0 chr2 74274212 . C . PASS END=74274214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74274215 . C . PASS END=74274216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 74274217 . T . PASS END=74274218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74274219 . C . PASS END=74274219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 74274220 . C . PASS END=74274221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74274222 . C . PASS END=74274223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 74274224 . T . PASS END=74274224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74274225 . T . PASS END=74274227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74274228 . G . PASS END=74274228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74274229 . A . PASS END=74274231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74274232 . T . PASS END=74274235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 74274236 . C . PASS END=74274238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,820:0,53,255:19,0 chr2 74274239 . T . PASS END=74274239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:18,0 chr2 74274240 . C . PASS END=74274257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:19,0 chr2 74274258 . C . PASS END=74274268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 74274269 . G . PASS END=74274291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,676:0,54,255:19,0 chr2 74274292 . T . PASS END=74274293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,615:0,57,255:19,0 chr2 74274294 . T . PASS END=74274294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 74274295 . T . PASS END=74274307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 74274308 . T . PASS END=74274308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:18,0 chr2 74274309 . C . PASS END=74274316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74274317 . C . PASS END=74274324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 74274325 . A . PASS END=74274326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 74274327 . C . PASS END=74274328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 74274329 . C T, 50.00 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=2.500;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,11,0:0.524,0.000:21:6,5,0:4,6,0:48:85,0,50,361,358,719:255,0,255:10,0:5.0000e+01,6.5751e-05,5.2898e+01,3.6142e+02,3.9245e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,2,9:4,6,4,7 chr2 74274330 . C . PASS END=74274330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74274331 . T . PASS END=74274331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 74274332 . A . PASS END=74274333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74274334 . A . PASS END=74274334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:19,0 chr2 74274335 . A . PASS END=74274336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74274337 . T . PASS END=74274337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 74274338 . G . PASS END=74274338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74274339 . A . PASS END=74274342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 74274343 . C . PASS END=74274353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 74274354 . G . PASS END=74274366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 74274367 . C . PASS END=74274387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr2 74274388 . C . PASS END=74274389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 74274390 . C . PASS END=74274397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr2 74274398 . A . PASS END=74274405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:17:0,39,585:0,51,255:13,0 chr2 74274406 . C . PASS END=74274417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 74274418 . T . PASS END=74274418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 74274419 . C . PASS END=74274421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 74274422 . A . PASS END=74274440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 74274441 . T . PASS END=74274441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr2 74274442 . G . PASS END=74274445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 74274446 . G . PASS END=74274447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74274448 . C . PASS END=74274449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74274450 . G . PASS END=74274450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74274451 . C . PASS END=74274451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr2 74274452 . G . PASS END=74274456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74274457 . T . PASS END=74274457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74274458 . G . PASS END=74274458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 74274459 . A . PASS END=74274462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74274463 . C . PASS END=74274469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 74274470 . T . PASS END=74274470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 74274471 . C . PASS END=74274473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:37:14:0,37,585:0,37,255:16,0 chr2 74274474 . T . PASS END=74274494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,637:0,41,255:18,0 chr2 74274495 . T . PASS END=74274495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 74274496 . G . PASS END=74274498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74274499 . T . PASS END=74274499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 74274500 . A . PASS END=74274501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 74274502 . C . PASS END=74274502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 74274503 . A . PASS END=74274503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 74274504 . A . PASS END=74274504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 74274505 . G . PASS END=74274515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr2 74274516 . A . PASS END=74274516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr2 74274517 . G . PASS END=74274520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:18,0 chr2 74274521 . G . PASS END=74274528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 74274529 . C . PASS END=74274529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 74274530 . T . PASS END=74274532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr2 74274533 . T . PASS END=74274533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 74274534 . C . PASS END=74274536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 74274537 . C . PASS END=74274537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 74274538 . C . PASS END=74274539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 74274540 . C . PASS END=74274540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 74274541 . G . PASS END=74274547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 74274548 . G . PASS END=74274548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 74274549 . C . PASS END=74274550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 74274551 . C . PASS END=74274551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 74274552 . C . PASS END=74274552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 74274553 . A . PASS END=74274555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 74274556 . C . PASS END=74274558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 74274559 . T . PASS END=74274559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 74274560 . G . PASS END=74274581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,901:0,62,255:26,0 chr2 74274582 . C . PASS END=74274583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74274584 . C . PASS END=74274594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 74274595 . G . PASS END=74274610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,987:0,84,255:30,0 chr2 74274611 . A . PASS END=74274611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 74274612 . A . PASS END=74274614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74274615 . C . PASS END=74274615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 74274616 . C . PASS END=74274620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74274621 . C . PASS END=74274623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 74274624 . C . PASS END=74274641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:29,0 chr2 74274642 . A . PASS END=74274642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 74274643 . C . PASS END=74274649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 74274650 . C . PASS END=74274665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:26,0 chr2 74274666 . A . PASS END=74274666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,954:0,53,255:22,0 chr2 74274667 . A . PASS END=74274672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,914:0,72,255:24,0 chr2 74274673 . G . PASS END=74274673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 74274674 . C . PASS END=74274679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,854:0,72,255:25,0 chr2 74274680 . A . PASS END=74274680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:24,0 chr2 74274681 . C . PASS END=74274727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,881:0,62,255:26,0 chr2 74274728 . C . PASS END=74274741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:54:25:0,54,810:0,61,255:19,0 chr2 74274742 . T . PASS END=74274742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:18,0 chr2 74274743 . G . PASS END=74274747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 74274748 . A . PASS END=74274748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 74274749 . C . PASS END=74274749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74274750 . G . PASS END=74274780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,638:0,41,255:19,0 chr2 74274781 . G . PASS END=74274796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,762:0,60,255:22,0 chr2 74274797 . C . PASS END=74274799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr2 74274800 . G . PASS END=74274810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:22,0 chr2 74274811 . C . PASS END=74274811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 74274812 . G . PASS END=74274826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:23,0 chr2 74274827 . G . PASS END=74274827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 74274828 . C . PASS END=74274837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 74274838 . G . PASS END=74274838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr2 74274839 . A . PASS END=74274895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,876:0,61,255:26,0 chr2 74274896 . C . PASS END=74274940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,50,255:19,0 chr2 74274941 . A . PASS END=74274941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr2 74274942 . G . PASS END=74274959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr2 74274960 . A . PASS END=74274960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:13,0 chr2 74274961 . A . PASS END=74274961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 74274962 . G . PASS END=74274971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr2 74274972 . A . PASS END=74274972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 74274973 . T . PASS END=74274979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 74274980 . G . PASS END=74274980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 74274981 . C . PASS END=74274981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74274982 . C . PASS END=74274998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 74274999 . A . PASS END=74275030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:22:9:0,22,304:0,22,255:9,0 chr2 74275031 . T . PASS END=74275031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,247:0,10,247:7,0 chr2 74275032 . C . PASS END=74275076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,235:0,24,235:9,0 chr2 74275077 . C . PASS END=74275083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr2 74275084 . T . PASS END=74275084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 74275085 . C . PASS END=74275094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 74275095 . G . PASS END=74275095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 74275096 . G . PASS END=74275102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr2 74275103 . A . PASS END=74275104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 74275105 . C . PASS END=74275111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 74275112 . A . PASS END=74275112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 74275113 . C . PASS END=74275139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr2 74275140 . C . PASS END=74275147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 74275148 . C . PASS END=74275148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74275149 . C . PASS END=74275149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74275150 . T . PASS END=74275150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 74275151 . G . PASS END=74275154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74275155 . A . PASS END=74275155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 74275156 . T . PASS END=74275186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,558:0,45,255:17,0 chr2 74275187 . G . PASS END=74275187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 74275188 . A . PASS END=74275204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,599:0,48,255:17,0 chr2 74275205 . A . PASS END=74275205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 74275206 . G . PASS END=74275207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:18,0 chr2 74275208 . T . PASS END=74275208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 74275209 . T . PASS END=74275215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr2 74275216 . T . PASS END=74275221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr2 74275222 . C . PASS END=74275239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,553:0,45,255:16,0 chr2 74275240 . T . PASS END=74275240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 74275241 . C . PASS END=74275252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr2 74275253 . A . PASS END=74275253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr2 74275254 . A . PASS END=74275254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr2 74275255 . C . PASS END=74275262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 74275263 . C . PASS END=74275263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 74275264 . A . PASS END=74275265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74275266 . G . PASS END=74275273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:15:0,32,495:0,32,255:13,0 chr2 74275274 . G . PASS END=74275282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 74275283 . A . PASS END=74275283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,582:0,23,255:15,0 chr2 74275284 . G . PASS END=74275294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,665:0,41,255:18,0 chr2 74275295 . A . PASS END=74275300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 74275301 . T . PASS END=74275311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 74275312 . A . PASS END=74275325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr2 74275326 . C . PASS END=74275326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 74275327 . T . PASS END=74275343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:26,0 chr2 74275344 . T . PASS END=74275344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 74275345 . G . PASS END=74275345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 74275346 . C . PASS END=74275353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:30,0 chr2 74275354 . C . PASS END=74275354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 74275355 . A . PASS END=74275498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:31:0,89,1141:0,89,255:40,0 chr2 74275499 . A . PASS END=74275499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1208:0,58,255:29,0 chr2 74275500 . A . PASS END=74275513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:31,0 chr2 74275514 . G . PASS END=74275514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:30,0 chr2 74275515 . A . PASS END=74275515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1106:0,30,255:29,0 chr2 74275516 . G . PASS END=74275524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:31,0 chr2 74275525 . C . PASS END=74275533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr2 74275534 . C . PASS END=74275534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:22,0 chr2 74275535 . G . PASS END=74275538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 74300676 . A . PASS END=74300679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,963:0,78,255:26,0 chr2 74300680 . A . PASS END=74300703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,864:0,62,255:25,0 chr2 74300704 . A . PASS END=74300704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 74300705 . T . PASS END=74300705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 74300706 . A . PASS END=74300707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 74300708 . T . PASS END=74300708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr2 74300709 . A . PASS END=74300716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1158:0,80,255:37,0 chr2 74300717 . T C, 49.94 PASS DP=37;MQ=250.00;MQRankSum=5.181;ReadPosRankSum=2.021;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,0:0.486,0.000:37:13,11,0:6,7,0:48:85,0,50,636,660,1295:255,0,255:19,0:4.9944e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,13,5:10,9,10,8 chr2 74300718 . T . PASS END=74300754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:36:0,98,1320:0,98,255:40,0 chr2 74300755 . C . PASS END=74300766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,99,1485:0,108,255:35,0 chr2 74307625 . G . PASS END=74307686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:42:0,88,1369:0,88,255:40,0 chr2 74307687 . A . PASS END=74307687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:54:56:0,54,1601:0,54,255:40,0 chr2 74307688 . G . PASS END=74307691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:55:0,120,1800:0,135,255:40,0 chr2 74307692 . T . PASS END=74307692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:59:54:0,59,1656:0,59,255:40,0 chr2 74307693 . C . PASS END=74307718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:49:0,120,1800:0,125,255:40,0 chr2 74314957 . G . PASS END=74314959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 74314960 . A . PASS END=74314974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:23,0 chr2 74314975 . C . PASS END=74314975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 74314976 . T . PASS END=74314998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:25,0 chr2 74314999 . G . PASS END=74314999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74315000 . T . PASS END=74315011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr2 74315012 . C . PASS END=74315029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:30,0 chr2 74315030 . A . PASS END=74315030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 74315031 . C . PASS END=74315069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1125:0,90,255:32,0 chr2 74315070 . T . PASS END=74315071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74315072 . C . PASS END=74315072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 74315073 . C . PASS END=74315127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:26,0 chr2 74315128 . G . PASS END=74315163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 74315164 . G . PASS END=74315164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 74315165 . A . PASS END=74315165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 74317024 . C . PASS END=74317026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 74317027 . G . PASS END=74317030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 74317031 . T . PASS END=74317031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74317032 . G . PASS END=74317135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1016:0,84,255:34,0 chr2 74317136 . C . PASS END=74317174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,71,255:26,0 chr2 74320029 . G . PASS END=74320043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 74320044 . A . PASS END=74320044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 74320045 . A . PASS END=74320048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr2 74320049 . T . PASS END=74320049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 74320050 . T . PASS END=74320079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1185:0,80,255:33,0 chr2 74320080 . C . PASS END=74320107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,909:0,62,255:26,0 chr2 74320108 . A . PASS END=74320108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:23,0 chr2 74320109 . T . PASS END=74320118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr2 74320425 . A . PASS END=74320448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:36,0 chr2 74320498 . C . PASS END=74320545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:42:0,88,1520:0,88,255:40,0 chr2 74320656 . G . PASS END=74320764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1215:0,89,255:40,0 chr2 74320765 . A . PASS END=74320765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr2 74320766 . G . PASS END=74320767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 74320768 . A . PASS END=74320774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,90,255:25,0 chr2 74320775 . C . PASS END=74320787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr2 74320788 . A . PASS END=74320793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,37,255:11,0 chr2 74326403 . G . PASS END=74326403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 74326404 . T . PASS END=74326404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 74326405 . C . PASS END=74326405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 74326406 . T . PASS END=74326406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 74326407 . G . PASS END=74326458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1109:0,80,255:38,0 chr2 74326459 . G . PASS END=74326459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:37,0 chr2 74326460 . C . PASS END=74326506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:37:0,84,1256:0,84,255:40,0 chr2 74326507 . T . PASS END=74326507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr2 74326508 . G . PASS END=74326531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,992:0,82,255:33,0 chr2 74326532 . A . PASS END=74326534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74326535 . G . PASS END=74326535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 74326536 . T . PASS END=74326536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr2 74326537 . G . PASS END=74326538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74326539 . G . PASS END=74326568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,71,255:26,0 chr2 74326569 . T . PASS END=74326569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,901:0,50,255:23,0 chr2 74326570 . C . PASS END=74326578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 74326579 . G . PASS END=74326579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:22,0 chr2 74326580 . G . PASS END=74326597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 74326598 . C . PASS END=74326604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 74326605 . A . PASS END=74326605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 74326606 . G . PASS END=74326611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 74326612 . C . PASS END=74326612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:27,0 chr2 74326613 . C . PASS END=74326616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr2 74326617 . A . PASS END=74326630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 74326631 . G . PASS END=74326687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1064:0,82,255:33,0 chr2 74326688 . G . PASS END=74326730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 74326731 . C . PASS END=74326739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr2 74327520 . G . PASS END=74327520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 74327521 . C . PASS END=74327522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 74327523 . T . PASS END=74327523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 74327524 . G . PASS END=74327524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,393:0,39,255:13,0 chr2 74327525 . T . PASS END=74327525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,376:0,11,255:13,0 chr2 74327526 . C . PASS END=74327526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 74327527 . T . PASS END=74327558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:19,0 chr2 74327559 . A . PASS END=74327562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 74327563 . C . PASS END=74327563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,651:0,13,255:18,0 chr2 74327564 . T . PASS END=74327570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:23,0 chr2 74327571 . A . PASS END=74327571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 74327572 . G . PASS END=74327584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:25,0 chr2 74327585 . A . PASS END=74327586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr2 74327587 . C . PASS END=74327597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 74327598 . C . PASS END=74327598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 74327599 . C . PASS END=74327610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,842:0,69,255:25,0 chr2 74327611 . C . PASS END=74327611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 74327612 . G . PASS END=74327629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr2 74327630 . A . PASS END=74327630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:22,0 chr2 74327631 . G . PASS END=74327664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,829:0,66,255:24,0 chr2 74327665 . C . PASS END=74327665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 74327666 . C . PASS END=74327678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:23,0 chr2 74327679 . A . PASS END=74327679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 74327680 . C . PASS END=74327691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:26,0 chr2 74327692 . C . PASS END=74327695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74327696 . C . PASS END=74327696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 74327697 . A . PASS END=74327700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 74327701 . C . PASS END=74327701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 74327702 . T . PASS END=74327711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:31,0 chr2 74327712 . A . PASS END=74327712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:27,0 chr2 74327713 . G . PASS END=74327721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 74327722 . G . PASS END=74327722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 74327723 . A . PASS END=74327724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74327725 . C . PASS END=74327728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1086:0,63,255:29,0 chr2 74327729 . G . PASS END=74327730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:29,0 chr2 74327731 . C . PASS END=74327732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74327733 . A . PASS END=74327733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1039:0,59,255:28,0 chr2 74327734 . T . PASS END=74327735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 74327736 . G . PASS END=74327737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 74327738 . T . PASS END=74327739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:29,0 chr2 74327740 . C . PASS END=74327740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr2 74327741 . C . PASS END=74327745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1127:0,82,255:30,0 chr2 74327746 . C . PASS END=74327746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr2 74327747 . A . PASS END=74327748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1109:0,82,255:29,0 chr2 74327749 . G . PASS END=74327749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr2 74327750 . T . PASS END=74327754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1127:0,80,255:30,0 chr2 74327755 . T . PASS END=74327755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr2 74327756 . C . PASS END=74327759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1109:0,80,255:29,0 chr2 74327760 . C . PASS END=74327760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 74327761 . G . PASS END=74327765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74327766 . T . PASS END=74327768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 74327769 . G . PASS END=74327769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:25,0 chr2 74327770 . C . PASS END=74327772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:26,0 chr2 74327773 . C . PASS END=74327773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:25,0 chr2 74327774 . T . PASS END=74327774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74327775 . A . PASS END=74327776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:26,0 chr2 74327777 . G . PASS END=74327778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1078:0,74,255:26,0 chr2 74327779 . C . PASS END=74327779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:25,0 chr2 74327780 . T . PASS END=74327780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 74327781 . T . PASS END=74327781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:25,0 chr2 74327782 . T . PASS END=74327782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:25,0 chr2 74327783 . C . PASS END=74327783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:25,0 chr2 74327784 . C . PASS END=74327786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 74327787 . C . PASS END=74327787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:25,0 chr2 74327788 . C . PASS END=74327791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,969:0,65,255:25,0 chr2 74327792 . A . PASS END=74327793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,917:0,42,255:25,0 chr2 74327794 . C . PASS END=74327795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:25,0 chr2 74327796 . C . PASS END=74327796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 74327797 . C . PASS END=74327797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:24,0 chr2 74327798 . G . PASS END=74327798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:23,0 chr2 74327799 . T . PASS END=74327800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:48:27:0,48,882:0,48,255:24,0 chr2 74327801 . T . PASS END=74327803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,945:0,62,255:25,0 chr2 74327804 . C . PASS END=74327808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:24,0 chr2 74327809 . T . PASS END=74327810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 74327811 . A . PASS END=74327811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,850:0,50,255:24,0 chr2 74327812 . G . PASS END=74327815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,976:0,65,255:25,0 chr2 74327816 . C . PASS END=74327816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr2 74327817 . T . PASS END=74327818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:24,0 chr2 74327819 . G . PASS END=74327819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,894:0,50,255:24,0 chr2 74327820 . G . PASS END=74327822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:23,0 chr2 74327823 . C . PASS END=74327823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:22,0 chr2 74327824 . T . PASS END=74327824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 74327825 . G . PASS END=74327825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:21,0 chr2 74327826 . G . PASS END=74327826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 74327827 . T . PASS END=74327827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr2 74327828 . G . PASS END=74327828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:20,0 chr2 74327829 . C . PASS END=74327829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:20,0 chr2 74327830 . C . PASS END=74327830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 74327831 . T . PASS END=74327831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 74327832 . G . PASS END=74327832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:19,0 chr2 74327833 . G . PASS END=74327836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,790:0,50,255:19,0 chr2 74327837 . C . PASS END=74327837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:17,0 chr2 74327838 . A . PASS END=74327866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,50,255:19,0 chr2 74327867 . A . PASS END=74327869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:21,0 chr2 74327870 . C . PASS END=74327881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:18,0 chr2 74327882 . G . PASS END=74327884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 74327885 . C . PASS END=74327902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr2 74327903 . C . PASS END=74327903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 74327904 . C . PASS END=74327949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,582:0,45,255:19,0 chr2 74327950 . T . PASS END=74327966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,34,255:13,0 chr2 74327967 . A . PASS END=74327977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 74327978 . C . PASS END=74327978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 74327979 . A . PASS END=74327982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74327983 . C . PASS END=74327995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 74327996 . T . PASS END=74327996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 74327997 . A . PASS END=74328008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 74328009 . A . PASS END=74328016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 74328017 . C . PASS END=74328025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 74328026 . A . PASS END=74328026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74328027 . A . PASS END=74328037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 74328038 . C . PASS END=74328043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74328044 . T . PASS END=74328044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74328045 . C . PASS END=74328045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 74328046 . A . PASS END=74328047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 74328048 . T . PASS END=74328048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:12,0 chr2 74328049 . G . PASS END=74328060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr2 74328061 . C . PASS END=74328061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 74328062 . T . PASS END=74328067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 74328068 . T . PASS END=74328068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:8,0 chr2 74328069 . T . PASS END=74328083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 74328084 . A . PASS END=74328099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,329:0,33,255:11,0 chr2 74328100 . C . PASS END=74328100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 74328101 . A . PASS END=74328103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 74328104 . A . PASS END=74328104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 74328105 . A . PASS END=74328106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr2 74328107 . C . PASS END=74328107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 74328108 . A . PASS END=74328108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr2 74328109 . A . PASS END=74328120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 74328121 . C . PASS END=74328128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr2 74328129 . C . PASS END=74328132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74328133 . G . PASS END=74328135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74328136 . T . PASS END=74328144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 74328145 . G . PASS END=74328164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr2 74328165 . T . PASS END=74328165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr2 74328166 . G . PASS END=74328179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr2 74328180 . T . PASS END=74328180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 74328181 . G . PASS END=74328197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,459:0,36,255:13,0 chr2 74328198 . A . PASS END=74328198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 74328199 . T . PASS END=74328199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr2 74328200 . G . PASS END=74328200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 74328201 . G . PASS END=74328213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr2 74328214 . C . PASS END=74328236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:14:0,40,468:0,40,255:19,0 chr2 74328237 . G . PASS END=74328245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 74328246 . T . PASS END=74328246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 74328247 . G . PASS END=74328252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 74328253 . C . PASS END=74328263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 74328264 . A . PASS END=74328264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,611:0,13,255:16,0 chr2 74328265 . C . PASS END=74328277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr2 74328278 . A . PASS END=74328278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:15,0 chr2 74328279 . G . PASS END=74328289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 74328290 . T . PASS END=74328290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 74328291 . T . PASS END=74328306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 74328307 . T . PASS END=74328315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74328316 . C . PASS END=74328319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr2 74328320 . C . PASS END=74328320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 74328321 . C . PASS END=74328338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 74328339 . T . LowGQ END=74328339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr2 74328340 . T . PASS END=74328350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 74328351 . G . PASS END=74328351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 74328352 . C . PASS END=74328364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr2 74328365 . C . PASS END=74328386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,288:0,24,255:9,0 chr2 74328387 . G . PASS END=74328388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 74328389 . C . PASS END=74328392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74328393 . T . PASS END=74328406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 74328407 . C . PASS END=74328440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr2 74328441 . G . PASS END=74328441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 74328442 . A . PASS END=74328442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 74328443 . G . PASS END=74328444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:18,0 chr2 74328445 . C . PASS END=74328445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:17,0 chr2 74328446 . A . PASS END=74328446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 74328447 . A . PASS END=74328447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 74328448 . A . PASS END=74328452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,546:0,40,255:17,0 chr2 74328453 . G . PASS END=74328453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 74328454 . G . PASS END=74328455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 74328456 . G . PASS END=74328456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:15,0 chr2 74328457 . C . PASS END=74328457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr2 74328458 . C . PASS END=74328458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr2 74328459 . C . PASS END=74328459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74328460 . C . PASS END=74328461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr2 74328462 . G . LowGQ END=74328462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,482:4,0,255:15,0 chr2 74328463 . C . PASS END=74328463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 74328464 . A . PASS END=74328464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74328465 . A . PASS END=74328466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr2 74328467 . T . PASS END=74328467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,515:0,48,255:16,0 chr2 74328468 . T . PASS END=74328469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 74328470 . G . PASS END=74328476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,584:0,48,255:17,0 chr2 74328477 . G . PASS END=74328477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 74328478 . C . PASS END=74328478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 74328479 . A . PASS END=74328479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:16,0 chr2 74328480 . C . PASS END=74328480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 74328481 . C . PASS END=74328483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr2 74328484 . G . PASS END=74328484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr2 74328485 . G . PASS END=74328485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 74328486 . C . PASS END=74328491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr2 74328492 . C . LowGQ END=74328493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,6:19:0:19:0,0,308:32,0,255:14,0 chr2 74328494 . G . PASS END=74328496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,576:0,40,255:17,0 chr2 74328497 . C . LowGQ END=74328498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,410:15,0,255:14,0 chr2 74328499 . C . PASS END=74328499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,592:0,40,255:17,0 chr2 74328500 . A . LowGQ END=74328500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,6:19:0:19:0,0,375:42,0,255:12,0 chr2 74328501 . G . PASS END=74328501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,507:0,23,255:16,0 chr2 74328502 . C . PASS END=74328502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:16,0 chr2 74328503 . C . PASS END=74328503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74328504 . T . LowGQ END=74328504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,5:18:0:18:0,0,332:51,0,255:13,0 chr2 74328505 . G . PASS END=74328505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr2 74328506 . A . PASS END=74328506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,449:0,1,255:14,0 chr2 74328507 . C . PASS END=74328507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr2 74328508 . T . PASS END=74328508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,459:0,18,255:15,0 chr2 74328509 . G . PASS END=74328509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr2 74328510 . A . PASS END=74328510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr2 74328511 . G . PASS END=74328511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr2 74328512 . A . PASS END=74328512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,459:0,18,255:14,0 chr2 74328513 . A . PASS END=74328513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 74328514 . G . PASS END=74328514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74328515 . C . PASS END=74328515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,492:0,34,255:15,0 chr2 74328516 . C . PASS END=74328517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 74328518 . T . PASS END=74328518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,435:0,18,255:13,0 chr2 74328519 . G . PASS END=74328521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74328522 . C . LowGQ END=74328522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,474:4,0,255:12,0 chr2 74328523 . G . PASS END=74328523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:13,0 chr2 74328524 . C . LowGQ END=74328525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,377:7,0,255:12,0 chr2 74328526 . G . PASS END=74328527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74328528 . G . PASS END=74328529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74328530 . G . PASS END=74328530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 74328531 . C . LowGQ END=74328532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:15:0,0,261:16,0,255:10,0 chr2 74328533 . G . PASS END=74328534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:12,0 chr2 74328535 . G . PASS END=74328535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:11,0 chr2 74328536 . G . PASS END=74328536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 74328537 . A . PASS END=74328537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,380:0,9,255:11,0 chr2 74328538 . T . PASS END=74328538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:12,0 chr2 74328539 . T . PASS END=74328539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:11,0 chr2 74328540 . T . PASS END=74328540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 74328541 . C . LowGQ END=74328541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:5,0,255:10,0 chr2 74328542 . A . PASS END=74328542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:11,0 chr2 74328543 . A . PASS END=74328543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 74328544 . C . LowGQ END=74328547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,296:0,0,255:11,0 chr2 74328548 . G . PASS END=74328548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:9,0 chr2 74328549 . C . PASS END=74328549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 74328550 . C . PASS END=74328551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,449:0,25,255:10,0 chr2 74328552 . T . LowGQ END=74328552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,286:44,0,255:9,0 chr2 74328553 . G . PASS END=74328554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr2 74328555 . A . PASS END=74328555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:9,0 chr2 74328556 . A . PASS END=74328556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr2 74328557 . G . PASS END=74328558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:5:12:0,5,349:0,5,255:8,0 chr2 74328559 . T . PASS END=74328559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 74328560 . A . PASS END=74328561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr2 74328562 . T . PASS END=74328563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:12:0,25,405:0,25,255:11,0 chr2 74328564 . C . PASS END=74328564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 74328565 . T . PASS END=74328565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:11,0 chr2 74328566 . G . PASS END=74328566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr2 74328567 . G . PASS END=74328569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 74328570 . T . PASS END=74328570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:10,0 chr2 74328571 . C . PASS END=74328571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 74328572 . C . PASS END=74328572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74328573 . A . LowGQ END=74328573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr2 74328574 . A . PASS END=74328578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr2 74328579 . A . PASS END=74328580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 74328581 . C . PASS END=74328581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 74328582 . T . LowGQ END=74328582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr2 74328583 . G . PASS END=74328583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 74328584 . T . PASS END=74328584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 74328585 . G . PASS END=74328585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 74328586 . G . PASS END=74328593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 74328594 . T . LowGQ END=74328594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,266:9,0,255:8,0 chr2 74328595 . G . PASS END=74328595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 74328596 . A . PASS END=74328596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74328597 . A . PASS END=74328598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 74328599 . G . PASS END=74328600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 74328601 . A . PASS END=74328601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 74328602 . G . PASS END=74328602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,347:0,3,255:9,0 chr2 74328603 . A . PASS END=74328606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 74328607 . G . PASS END=74328607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr2 74328608 . G . PASS END=74328608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr2 74328609 . G . PASS END=74328613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:13,0 chr2 74328614 . A . PASS END=74328614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 74328615 . T . PASS END=74328616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74328617 . C . LowGQ END=74328617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,380:5,0,255:12,0 chr2 74328618 . C . PASS END=74328619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74328620 . G . LowGQ END=74328620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,402:13,0,255:12,0 chr2 74328621 . C . PASS END=74328629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 74328630 . C . PASS END=74328630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 74328631 . C . PASS END=74328636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 74328637 . G . PASS END=74328644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 74328645 . G . PASS END=74328645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 74328646 . G . PASS END=74328652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr2 74328653 . C . PASS END=74328662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,768:0,63,255:23,0 chr2 74328663 . G . PASS END=74328663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 74328664 . T . PASS END=74328685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,833:0,61,255:25,0 chr2 74328686 . A . PASS END=74328686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,723:0,42,255:23,0 chr2 74328687 . A . PASS END=74328706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,930:0,62,255:24,0 chr2 74328707 . T . PASS END=74328707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 74328708 . C . PASS END=74328712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 74328713 . G . PASS END=74328713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 74328714 . A . PASS END=74328728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,754:0,66,255:26,0 chr2 74328729 . C . PASS END=74328735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:29,0 chr2 74328736 . C . PASS END=74328736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 74328737 . C . PASS END=74328740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 74328741 . A . PASS END=74328741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 74328742 . G . PASS END=74328765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,989:0,87,255:29,0 chr2 74328766 . C . PASS END=74328766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1070:0,62,255:30,0 chr2 74328767 . A . PASS END=74328770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1218:0,96,255:32,0 chr2 74328771 . A . PASS END=74328771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:29,0 chr2 74328772 . G . PASS END=74328784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:32,0 chr2 74328785 . G . PASS END=74328785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr2 74328786 . A . PASS END=74328791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1140:0,83,255:32,0 chr2 74328792 . A . PASS END=74328792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:25,0 chr2 74328793 . G . PASS END=74328794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 74328795 . G . PASS END=74328800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr2 74328801 . G . PASS END=74328801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 74328802 . T . PASS END=74328851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,825:0,61,255:25,0 chr2 74328852 . T . PASS END=74328852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:21,0 chr2 74328853 . C . PASS END=74328856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74328857 . G . PASS END=74328857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 74328858 . A . PASS END=74328862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:22,0 chr2 74328863 . A . PASS END=74328863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 74328864 . A . PASS END=74328867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74328868 . C . PASS END=74328873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 74328874 . C . PASS END=74328897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 74328898 . C . PASS END=74328899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,955:0,45,255:25,0 chr2 74328900 . C . PASS END=74328900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:25,0 chr2 74328901 . C . PASS END=74328901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:25,0 chr2 74328902 . A . PASS END=74328923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 74328924 . G . PASS END=74328955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,653:0,54,255:18,0 chr2 74328956 . C . PASS END=74328957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 74328958 . C . PASS END=74328958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74328959 . A . PASS END=74328959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 74328960 . A . PASS END=74328965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74328966 . G . PASS END=74328966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 74328967 . C . PASS END=74328987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:19,0 chr2 74328988 . G . PASS END=74329004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,739:0,63,255:23,0 chr2 74329005 . A . PASS END=74329007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:20,0 chr2 74329008 . A . PASS END=74329012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 74329013 . A . PASS END=74329013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:20,0 chr2 74329014 . A . PASS END=74329017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74329018 . G . PASS END=74329018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:20,0 chr2 74329019 . C . PASS END=74329019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,782:0,30,255:21,0 chr2 74329020 . C . PASS END=74329032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,898:0,62,255:23,0 chr2 74329033 . G . PASS END=74329033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 74329034 . G . PASS END=74329044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 74329045 . A . PASS END=74329045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 74329046 . G . PASS END=74329057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 74329058 . C . PASS END=74329058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 74329059 . A . PASS END=74329062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr2 74329063 . G . PASS END=74329063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 74329064 . G . PASS END=74329064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74329065 . C . PASS END=74329075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 74329076 . C . PASS END=74329080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74329081 . A . PASS END=74329084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74329085 . C . PASS END=74329107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,800:0,63,255:25,0 chr2 74329108 . C . PASS END=74329109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 74329110 . T . PASS END=74329111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 74329112 . G . PASS END=74329112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:24,0 chr2 74329113 . G . PASS END=74329113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74329114 . C . PASS END=74329116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74329117 . G . PASS END=74329117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 74329118 . C . PASS END=74329123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 74329124 . G . PASS END=74329124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr2 74329125 . C . PASS END=74329127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:30,0 chr2 74329128 . A . PASS END=74329128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:27,0 chr2 74329129 . G . PASS END=74329137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:29,0 chr2 74329138 . G . PASS END=74329138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:26,0 chr2 74329139 . A . PASS END=74329141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr2 74329142 . A . PASS END=74329143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,918:0,73,255:27,0 chr2 74329144 . G . PASS END=74329193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1163:0,80,255:33,0 chr2 74329194 . A . PASS END=74329194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:31,0 chr2 74329195 . G . PASS END=74329244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1068:0,82,255:34,0 chr2 74329245 . T . PASS END=74329245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:33,0 chr2 74329246 . C . PASS END=74329259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:33,0 chr2 74329260 . A . PASS END=74329282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,939:0,75,255:25,0 chr2 74329283 . C . PASS END=74329283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr2 74329284 . C . PASS END=74329290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr2 74329291 . C . PASS END=74329291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 74329292 . C . PASS END=74329297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74329298 . A . PASS END=74329298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr2 74329299 . T . PASS END=74329300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74329301 . T . PASS END=74329303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr2 74362368 . T . PASS END=74362370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,120,1800:0,122,255:40,0 chr2 74362530 . C . PASS END=74362530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 74362586 . A . PASS END=74362586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 74362649 . T . PASS END=74362767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:36:0,99,1485:0,103,255:40,0 chr2 74362768 . G . PASS END=74362768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr2 74362769 . A . PASS END=74362785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1169:0,86,255:34,0 chr2 74369399 . C . PASS END=74369487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:67:0,120,1800:0,201,255:40,0 chr2 74372316 . C . PASS END=74372430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,130,255:40,0 chr2 74374948 . C . PASS END=74374955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 74374956 . T . PASS END=74374974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,961:0,65,255:25,0 chr2 74374975 . T . PASS END=74374975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 74374976 . G . PASS END=74375001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr2 74375009 . C . PASS END=74375009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 74375036 . G . PASS END=74375036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:33:22:0,33,495:0,66,255:11,0 chr2 74383695 . T . PASS END=74383772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,99,1485:0,114,255:40,0 chr2 74386218 . C . PASS END=74386381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:40:0,107,1472:0,107,255:40,0 chr2 74392345 . C . PASS END=74392478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:97:46:0,97,1469:0,97,255:40,0 chr2 74394141 . C . PASS END=74394234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,115,1553:0,115,255:40,0 chr2 74399713 . T . PASS END=74399878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:30:0,87,1117:0,87,255:40,0 chr2 74399879 . G . PASS END=74399879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:29,0 chr2 74405242 . C . PASS END=74405374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:38:0,84,1260:0,108,255:40,0 chr2 74405375 . G . PASS END=74405375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 74405376 . C . PASS END=74405376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:26,0 chr2 74405377 . G . PASS END=74405377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 74405378 . G . PASS END=74405378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 74405379 . C . PASS END=74405379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:23,0 chr2 74405380 . A . PASS END=74405381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 74405788 . A . PASS END=74405793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 74405794 . A . PASS END=74405794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 74405795 . A . PASS END=74405795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 74405796 . G . PASS END=74405796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 74405797 . C . PASS END=74405799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74405800 . A . PASS END=74405801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,976:0,70,255:27,0 chr2 74425769 . A . PASS END=74425781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:18,0 chr2 74425782 . C . PASS END=74425782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,0 chr2 74425783 . T . PASS END=74425792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 74425793 . G . PASS END=74425865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,709:0,60,255:26,0 chr2 74425866 . T . PASS END=74425866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:22,0 chr2 74425867 . T . PASS END=74425869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 74432832 . A . PASS END=74432847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr2 74432848 . A . PASS END=74432848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:10,0 chr2 74432849 . T . PASS END=74432857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 74432858 . G . PASS END=74432928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,537:0,42,255:17,0 chr2 74432929 . C . PASS END=74432929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 74432930 . G . PASS END=74432943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,612:0,48,255:19,0 chr2 74432944 . G . PASS END=74432949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74432950 . C . PASS END=74432960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74432961 . G . PASS END=74432964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 74432965 . C . PASS END=74432974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 74432975 . A . PASS END=74433001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 74433002 . C . PASS END=74433010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:23:11:0,23,360:0,23,255:10,0 chr2 74433011 . T . PASS END=74433011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr2 74433012 . T . PASS END=74433016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 74434831 . G . PASS END=74434953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,120,1800:0,124,255:40,0 chr2 74435696 . A . PASS END=74435848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,99,1482:0,99,255:40,0 chr2 74437069 . G . PASS END=74437071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 74437072 . T . PASS END=74437077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 74437078 . C . PASS END=74437078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 74437079 . C . PASS END=74437080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr2 74437081 . T . PASS END=74437081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 74437082 . A . PASS END=74437086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr2 74437087 . A . PASS END=74437087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 74437088 . G . PASS END=74437090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:14,0 chr2 74437091 . T . PASS END=74437091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74437092 . G . PASS END=74437094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr2 74437095 . G . PASS END=74437095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74437096 . T . PASS END=74437101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr2 74437102 . C . PASS END=74437102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 74437103 . T . PASS END=74437105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr2 74437106 . A . PASS END=74437106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74437107 . A . PASS END=74437109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:15,0 chr2 74437110 . T . PASS END=74437110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 74437111 . C . PASS END=74437115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:14,0 chr2 74437116 . A . PASS END=74437116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 74437117 . A . PASS END=74437117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:14,0 chr2 74437118 . C . PASS END=74437118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 74437119 . G . PASS END=74437119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74437120 . T . PASS END=74437120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 74437121 . T . PASS END=74437156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:18,0 chr2 74437157 . G . PASS END=74437176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 74438326 . G . PASS END=74438418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:28:0,82,1055:0,82,255:40,0 chr2 74438868 . G . PASS END=74438993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:34:0,82,1274:0,82,255:40,0 chr2 74441206 . G . PASS END=74441369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:39:0,93,1395:0,93,255:40,0 chr2 74445754 . C . PASS END=74445754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 74445755 . T . PASS END=74445755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 74445756 . A . PASS END=74445770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr2 74445771 . T . PASS END=74445771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 74445772 . G . PASS END=74445786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,546:0,51,255:18,0 chr2 74445787 . G . PASS END=74445807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:25,0 chr2 74445808 . G . PASS END=74445810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 74445811 . A . PASS END=74445813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74445814 . G . PASS END=74445824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:30,0 chr2 74445825 . T . PASS END=74445825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 74445826 . C . PASS END=74445847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1057:0,87,255:30,0 chr2 74445848 . A . PASS END=74445848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 74445849 . T . PASS END=74445849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:26,0 chr2 74445850 . G . PASS END=74445851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 74445852 . A . PASS END=74445852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,889:0,70,255:26,0 chr2 74445853 . C . PASS END=74445853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 74445854 . A . PASS END=74445899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:26,0 chr2 74445900 . T . PASS END=74445900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr2 74445901 . T . PASS END=74445904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 74445905 . A . PASS END=74445919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:18:0,51,765:0,54,255:19,0 chr2 74448561 . C . PASS END=74448617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:46:0,120,1800:0,134,255:40,0 chr2 74448618 . A . PASS END=74448628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,142,255:40,0 chr2 74449995 . T . PASS END=74450079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,114,1710:0,126,255:40,0 chr2 74451967 . C . PASS END=74452137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:87:32:0,87,1172:0,96,255:40,2 chr2 74454084 . C . PASS END=74454086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 74454087 . G . PASS END=74454087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 74454088 . A . PASS END=74454092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:25,0 chr2 74454093 . G . PASS END=74454093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:32:27:0,32,881:0,32,255:22,0 chr2 74454094 . A . PASS END=74454099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,933:0,67,255:26,0 chr2 74454100 . A . PASS END=74454101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 74454102 . G . PASS END=74454102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,929:0,54,255:26,0 chr2 74454103 . G . PASS END=74454108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 74454109 . A . PASS END=74454109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 74454110 . C . PASS END=74454110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74454111 . C . PASS END=74454111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:25,0 chr2 74454112 . G . PASS END=74454112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 74454113 . T . PASS END=74454115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74454116 . A . PASS END=74454116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:27,0 chr2 74454117 . T . PASS END=74454122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,987:0,81,255:28,0 chr2 74454123 . G . PASS END=74454123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 74454124 . A . PASS END=74454124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 74454125 . T . PASS END=74454125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 74454126 . C . PASS END=74454127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74454128 . A . PASS END=74454128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 74454129 . G . PASS END=74454131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74454132 . C . PASS END=74454144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 74454145 . A . PASS END=74454145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:27,0 chr2 74454146 . G . PASS END=74454146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74454147 . G . PASS END=74454147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,983:0,76,255:27,0 chr2 74454148 . A . PASS END=74454152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 74454153 . C . PASS END=74454153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:28,0 chr2 74454154 . A . PASS END=74454155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74454156 . C . PASS END=74454156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74454157 . A . PASS END=74454157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:12:30:0,12,909:0,12,255:24,0 chr2 74454158 . G . PASS END=74454161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 74454162 . G . PASS END=74454174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,60,255:27,0 chr2 74454175 . C . PASS END=74454175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:20,0 chr2 74454176 . G . PASS END=74454182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:25,0 chr2 74454183 . C . LowGQ END=74454183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,613:2,0,255:22,0 chr2 74454184 . G . PASS END=74454185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 74454186 . C . PASS END=74454186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:3:27:0,3,731:0,3,255:24,0 chr2 74454187 . A . PASS END=74454187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,739:0,31,255:23,0 chr2 74454188 . C . PASS END=74454193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,722:0,64,255:25,0 chr2 74454194 . G . PASS END=74454194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,656:0,31,255:21,0 chr2 74454195 . C . PASS END=74454195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:23,0 chr2 74454196 . A . PASS END=74454196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,787:0,25,255:22,0 chr2 74454197 . G . PASS END=74454198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:24,0 chr2 74454199 . A . PASS END=74454199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,808:0,45,255:22,0 chr2 74454200 . A . PASS END=74454200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,792:0,31,255:23,0 chr2 74454201 . G . PASS END=74454202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,803:0,61,255:25,0 chr2 74454203 . C . PASS END=74454203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:24,0 chr2 74454204 . A . PASS END=74454204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,759:0,28,255:21,0 chr2 74454205 . T . PASS END=74454208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:24,0 chr2 74454209 . C . PASS END=74454209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:21,0 chr2 74454210 . C . PASS END=74454210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 74454211 . G . PASS END=74454215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:24:0,42,762:0,42,255:22,0 chr2 74454216 . G . PASS END=74454216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 74454217 . T . PASS END=74454217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 74454218 . G . PASS END=74454218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 74454219 . C . PASS END=74454219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,741:0,22,255:17,0 chr2 74454220 . T . PASS END=74454220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,740:0,33,255:20,0 chr2 74454221 . T . PASS END=74454221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 74454222 . G . PASS END=74454223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 74454224 . C . PASS END=74454224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:20,0 chr2 74454225 . T . PASS END=74454228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,753:0,49,255:20,0 chr2 74454229 . A . PASS END=74454229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,722:0,22,255:20,0 chr2 74454230 . T . PASS END=74454230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74454231 . C . PASS END=74454231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 74454232 . A . PASS END=74454232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74454233 . G . PASS END=74454233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:19,0 chr2 74454234 . G . PASS END=74454234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 74454235 . A . PASS END=74454238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 74454239 . G . PASS END=74454239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:19,0 chr2 74454240 . C . PASS END=74454240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 74454241 . T . PASS END=74454241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74454242 . T . PASS END=74454242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr2 74454243 . G . PASS END=74454243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,676:0,11,255:19,0 chr2 74454244 . C . PASS END=74454245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74454246 . G . PASS END=74454257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,682:0,44,255:19,0 chr2 74454644 . T . PASS END=74454691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1094:0,88,255:36,0 chr2 74454937 . C . PASS END=74455005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1150:0,83,255:39,0 chr2 74458363 . C . PASS END=74458363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 74458364 . T . PASS END=74458364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:31,0 chr2 74458365 . T . PASS END=74458435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1150:0,80,255:36,0 chr2 74459596 . C . PASS END=74459612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:23,0 chr2 74459613 . G . PASS END=74459613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 74459614 . G . PASS END=74459619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 74459620 . T . PASS END=74459620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 74459621 . C . PASS END=74459633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,903:0,75,255:26,0 chr2 74459634 . G . PASS END=74459650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,934:0,81,255:30,0 chr2 74459651 . T . PASS END=74459651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 74459652 . G . PASS END=74459736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1119:0,83,255:36,0 chr2 74459737 . C . PASS END=74459739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,96,255:26,0 chr2 74459740 . A . PASS END=74459747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 74459748 . C . PASS END=74459761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:25,0 chr2 74459762 . A . PASS END=74459762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 74459763 . G . PASS END=74459765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 74459766 . G . PASS END=74459772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 74459773 . T . PASS END=74459773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr2 74459774 . T . PASS END=74459774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 74460529 . C . PASS END=74460534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:24,0 chr2 74460535 . T . PASS END=74460535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,603:0,38,255:22,0 chr2 74460536 . T . PASS END=74460539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 74460540 . T . PASS END=74460540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 74460541 . C . PASS END=74460550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,840:0,72,255:25,0 chr2 74460551 . T . PASS END=74460551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,732:0,58,255:22,0 chr2 74460552 . T . PASS END=74460562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,986:0,72,255:26,0 chr2 74460563 . G . PASS END=74460575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr2 74460576 . G . PASS END=74460576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 74460577 . G . PASS END=74460593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:33,0 chr2 74460594 . T . PASS END=74460594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr2 74460595 . G . PASS END=74460666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1247:0,86,255:37,0 chr2 74460667 . C . PASS END=74460678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,80,255:25,0 chr2 74460679 . A . PASS END=74460681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:22,0 chr2 74460682 . C . PASS END=74460689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 74460690 . G . PASS END=74460690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 74462228 . C . PASS END=74462341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,110,1541:0,110,255:40,0 chr2 74466462 . C . PASS END=74466491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,903:0,78,255:26,0 chr2 74466492 . C . PASS END=74466495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 74466496 . T . PASS END=74466496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 74466497 . T . PASS END=74466500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 74466501 . G . PASS END=74466501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 74466502 . G . PASS END=74466503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74466504 . C . PASS END=74466504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 74466505 . A . PASS END=74466556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1305:0,93,255:40,0 chr2 74466557 . C . PASS END=74466593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:43:0,83,1598:0,83,255:40,0 chr2 74466594 . G A, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=1.760;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,25,0:0.581,0.000:43:9,11,0:9,14,0:47:85,0,48,886,644,1530:255,0,255:16,0:5.0000e+01,8.0506e-05,5.0692e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,12,11,14:13,5,15,10 chr2 74466595 . C . PASS END=74466629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1311:0,95,255:37,0 chr2 74466630 . C . PASS END=74466631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:71:34:0,71,1170:0,71,255:26,0 chr2 74466632 . A . PASS END=74466643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:61:26:0,61,908:0,61,255:26,0 chr2 74466644 . T . PASS END=74466662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:19:0,45,675:0,57,255:18,0 chr2 74469121 . C . PASS END=74469145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1109:0,82,255:36,0 chr2 74469146 . A . PASS END=74469146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:34,0 chr2 74469147 . A . PASS END=74469166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,108,255:35,0 chr2 74469167 . A . PASS END=74469179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,77,255:26,0 chr2 74474163 . C . PASS END=74474416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:37:0,90,1350:0,111,255:40,0 chr2 74474417 . T . PASS END=74474434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:26:0,75,986:0,77,255:26,0 chr2 74475480 . T . PASS END=74475610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1215:0,91,255:40,0 chr2 74475611 . T . PASS END=74475611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 74475612 . C . PASS END=74475613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,83,255:27,0 chr2 74477470 . C . PASS END=74477490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,786:0,66,255:26,0 chr2 74477491 . C . PASS END=74477643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1133:0,81,255:40,0 chr2 74477644 . C . PASS END=74477644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr2 74479306 . C . PASS END=74479316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:23:0,61,831:0,61,255:26,0 chr2 74479317 . G . PASS END=74479324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,905:0,81,255:28,0 chr2 74479325 . C . PASS END=74479325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 74479326 . C . PASS END=74479329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74479330 . C . PASS END=74479330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:27,0 chr2 74479331 . C . PASS END=74479331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74479332 . G . PASS END=74479332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 74479333 . A . PASS END=74479334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 74479335 . T . PASS END=74479336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 74479337 . C . PASS END=74479338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74479339 . T . PASS END=74479341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 74479342 . A . PASS END=74479352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 74479353 . C . PASS END=74479353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 74479354 . T . PASS END=74479370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1135:0,82,255:33,0 chr2 74479371 . G . PASS END=74479371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr2 74479372 . C . PASS END=74479457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1180:0,83,255:38,0 chr2 74479458 . G . PASS END=74479458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:31,0 chr2 74479459 . C . PASS END=74479463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:33,0 chr2 74479464 . T . PASS END=74479464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:31,0 chr2 74479465 . C . PASS END=74479483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:31,0 chr2 74479484 . G . PASS END=74479515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 74480101 . C . PASS END=74480242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1215:0,82,255:40,0 chr2 74480243 . C . PASS END=74480253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,80,255:22,0 chr2 74480254 . A . PASS END=74480254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 74480255 . G . PASS END=74480255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 74481746 . A . PASS END=74481833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:45:0,105,1453:0,105,255:40,0 chr2 74482902 . C . PASS END=74482928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,662:0,57,255:19,0 chr2 74482929 . C . PASS END=74482931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr2 74482932 . C . PASS END=74482932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 74482933 . C . PASS END=74482937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr2 74482938 . A . PASS END=74482938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 74482939 . T . PASS END=74482946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 74482947 . T . PASS END=74482947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 74482948 . G . PASS END=74483001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,892:0,63,255:24,0 chr2 74483002 . C . PASS END=74483033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,507:0,45,255:18,0 chr2 74483034 . A . PASS END=74483034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 74483035 . T . PASS END=74483042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 74483043 . A . PASS END=74483043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr2 74483044 . T . PASS END=74483059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:12,0 chr2 74486715 . C . PASS END=74486770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,106,1721:0,106,255:40,0 chr2 74489264 . A . PASS END=74489306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1189:0,88,255:38,0 chr2 74489307 . C . PASS END=74489307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr2 74489308 . G . PASS END=74489347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1305:0,108,255:38,0 chr2 74489348 . C . PASS END=74489359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:26:0,69,1035:0,78,255:25,0 chr2 74491274 . T . PASS END=74491426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:38:0,93,1395:0,114,255:40,0 chr2 74492231 . C . PASS END=74492378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1215:0,86,255:40,0 chr2 74492379 . A . PASS END=74492380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74492381 . A . PASS END=74492382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74492383 . T . PASS END=74492383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr2 74492384 . T . PASS END=74492384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74492385 . T . PASS END=74492385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr2 74492386 . A . PASS END=74492387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74492388 . C . PASS END=74492390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74492391 . C . PASS END=74492391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 74512900 . C . PASS END=74512901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 74512902 . G . PASS END=74512902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 74512903 . G . PASS END=74512909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74512910 . C . PASS END=74512951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1041:0,84,255:33,0 chr2 74512952 . T . PASS END=74512952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:30,0 chr2 74512953 . C . PASS END=74512962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1181:0,88,255:34,0 chr2 74512963 . A . PASS END=74512963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:28,0 chr2 74512964 . G . PASS END=74512992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1133:0,90,255:31,0 chr2 74512993 . C . PASS END=74512993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 74512994 . C . PASS END=74512994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74512995 . C . PASS END=74513009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,74,255:26,0 chr2 74513010 . C . PASS END=74513029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:16:0,48,590:0,48,255:19,0 chr2 74531616 . G . PASS END=74531635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:26,0 chr2 74531636 . A . PASS END=74531645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,986:0,80,255:32,0 chr2 74531646 . C . PASS END=74531646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:30,0 chr2 74531647 . C . PASS END=74531648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 74531649 . G . PASS END=74531649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr2 74531650 . G . PASS END=74531735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,89,255:38,0 chr2 74531736 . G . PASS END=74531737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr2 74531738 . T . PASS END=74531741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74531742 . C . PASS END=74531742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74531743 . C . PASS END=74531750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74531751 . C . PASS END=74531752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74531753 . G . PASS END=74531760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74531761 . T . PASS END=74531771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:23,0 chr2 74531772 . T . PASS END=74531773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 74531774 . G . PASS END=74531774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 74531775 . G . PASS END=74531797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr2 74531798 . G . PASS END=74531807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr2 74542072 . C . PASS END=74542150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1738:0,120,255:40,0 chr2 74588375 . A . PASS END=74588375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 74588515 . G . PASS END=74588515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74588626 . T . PASS END=74588631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:25,0 chr2 74588632 . G . PASS END=74588752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,997:0,81,255:40,0 chr2 74588753 . T . PASS END=74588763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,80,255:25,0 chr2 74589163 . C . PASS END=74589163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 74589179 . C . PASS END=74589268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:34:0,83,1246:0,83,255:40,0 chr2 74589777 . C . PASS END=74589856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:95:37:0,95,1347:0,95,255:40,0 chr2 74590116 . C . PASS END=74590116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 74590121 . C . PASS END=74590284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1152:0,83,255:40,0 chr2 74590285 . G . PASS END=74590300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,77,255:26,0 chr2 74590301 . C . PASS END=74590304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr2 74590421 . C . PASS END=74590424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr2 74590425 . A . PASS END=74590425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 74590426 . G . PASS END=74590428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:23,0 chr2 74590429 . T . PASS END=74590429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 74590430 . G . PASS END=74590446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:25,0 chr2 74590447 . G . PASS END=74590474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:28,0 chr2 74590475 . G . PASS END=74590476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 74590477 . T . PASS END=74590489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:30,0 chr2 74590490 . C . PASS END=74590490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:23,0 chr2 74590491 . A . PASS END=74590526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,917:0,62,255:25,0 chr2 74590527 . G . PASS END=74590547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,630:0,41,255:19,0 chr2 74590548 . A . PASS END=74590551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 74590552 . C . PASS END=74590554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 74590741 . C . PASS END=74590755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1149:0,93,255:33,0 chr2 74590768 . T . PASS END=74590768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 74592202 . C . PASS END=74592334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1249:0,89,255:40,0 chr2 74592335 . A . PASS END=74592335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 74592336 . G . PASS END=74592340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 74592341 . G . PASS END=74592345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:34:0,72,1080:0,102,255:26,0 chr2 74592346 . C . PASS END=74592354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,92,255:29,0 chr2 74592355 . T . PASS END=74592365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:25,0 chr2 74592366 . T . PASS END=74592366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,867:0,56,255:23,0 chr2 74592367 . C . PASS END=74592368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr2 74592636 . C . PASS END=74592636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 74592642 . T . PASS END=74592657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:26,0 chr2 74592658 . G . PASS END=74592693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1100:0,87,255:40,0 chr2 74592694 . T . PASS END=74592694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1420:0,76,255:36,0 chr2 74592695 . C . PASS END=74592776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,89,255:40,0 chr2 74592777 . T . PASS END=74592777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:27,0 chr2 74592778 . C . PASS END=74592779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:29,0 chr2 74592780 . T . PASS END=74592780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 74592781 . C . PASS END=74592784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74593020 . C . PASS END=74593145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:39:0,81,1405:0,81,255:40,0 chr2 74593371 . C . PASS END=74593713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1209:0,86,255:40,0 chr2 74593714 . A . PASS END=74593714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:29,0 chr2 74593715 . G . PASS END=74593724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:32,0 chr2 74593725 . C . PASS END=74593735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:32:0,69,1035:0,72,255:26,0 chr2 74593736 . C . PASS END=74593737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 74593738 . T . PASS END=74593741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 74593742 . A . PASS END=74593744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74593745 . T . PASS END=74593747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 74593910 . C . PASS END=74593910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 74593911 . T . PASS END=74593911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr2 74593912 . G . PASS END=74593913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 74593914 . G . PASS END=74593914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 74593915 . G . PASS END=74594059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1186:0,83,255:40,0 chr2 74594172 . C . PASS END=74594234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,119,1800:0,119,255:40,0 chr2 74594479 . C . PASS END=74594547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:44:0,83,1612:0,83,255:40,0 chr2 74594823 . C . PASS END=74594991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:39:0,99,1485:0,110,255:40,0 chr2 74594997 . G . PASS END=74594997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 74595098 . T . PASS END=74595187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,87,255:39,0 chr2 74595188 . A . PASS END=74595188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 74595189 . G . PASS END=74595189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 74595190 . C . PASS END=74595215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,945:0,60,255:26,0 chr2 74595216 . T . PASS END=74595224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 74595225 . A . PASS END=74595225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:16,0 chr2 74595226 . C . PASS END=74595258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,621:0,41,255:19,0 chr2 74595855 . C . PASS END=74595855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 74595856 . T . PASS END=74595856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr2 74595857 . T . PASS END=74595870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,822:0,72,255:26,0 chr2 74595871 . G . PASS END=74595871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,766:0,28,255:23,0 chr2 74595872 . G . PASS END=74595872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,735:0,15,255:23,0 chr2 74595873 . C . PASS END=74595876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 74595877 . A . PASS END=74595877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74595878 . G . PASS END=74595878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:23,0 chr2 74595879 . C . PASS END=74595919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,947:0,62,255:26,0 chr2 74595920 . G . PASS END=74595925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 74595926 . T . PASS END=74595926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr2 74595927 . G . PASS END=74595928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr2 74595929 . C . PASS END=74595930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74595931 . G . PASS END=74595943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1094:0,87,255:29,0 chr2 74595944 . T . PASS END=74595972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr2 74595973 . G . PASS END=74595983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 74595984 . C . PASS END=74595984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74595985 . T . PASS END=74596006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:19,0 chr2 74596007 . C . PASS END=74596007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74596225 . C . PASS END=74596341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,118,1800:0,118,255:40,0 chr2 74596422 . T . PASS END=74596422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 74596427 . C . PASS END=74596618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:32:0,81,1200:0,83,255:40,0 chr2 74596625 . C . PASS END=74596626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:22,0 chr2 74597092 . C . PASS END=74597196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,110,1800:0,110,255:40,0 chr2 74597202 . T . PASS END=74597202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr2 74597206 . G . PASS END=74597206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:44:0,84,1260:0,132,255:28,0 chr2 74597313 . C . PASS END=74597315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1185:0,80,255:27,0 chr2 74597316 . C . PASS END=74597316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr2 74597317 . T . PASS END=74597355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1172:0,88,255:37,0 chr2 74597356 . T . PASS END=74597356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr2 74597357 . C . PASS END=74597368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,101,1318:0,101,255:37,0 chr2 74597369 . G . PASS END=74597369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:36,0 chr2 74597370 . C . PASS END=74597444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:37:0,87,1305:0,94,255:40,0 chr2 74597445 . C . PASS END=74597457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,77,255:26,0 chr2 74597458 . G . PASS END=74597458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74597459 . A . PASS END=74597459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:25,0 chr2 74597460 . A . PASS END=74597461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74597462 . G . PASS END=74597462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:25,0 chr2 74597463 . A . PASS END=74597468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:29,0 chr2 74597469 . C . PASS END=74597469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr2 74597470 . A . PASS END=74597470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74597471 . T . PASS END=74597472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 74597475 . G . PASS END=74597475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74597587 . C . PASS END=74597587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 74597593 . C . PASS END=74597671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,105,1557:0,110,255:40,0 chr2 74597744 . T . PASS END=74597744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:41:0,92,1356:0,92,255:34,0 chr2 74597748 . C . PASS END=74597754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:36:0,81,1232:0,81,255:35,0 chr2 74597755 . T . PASS END=74597755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1203:0,56,255:34,0 chr2 74597756 . T . PASS END=74597952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:95:37:0,95,1303:0,95,255:40,0 chr2 74598101 . C . PASS END=74598101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74598106 . C . PASS END=74598109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,966:0,84,255:28,0 chr2 74598110 . C . PASS END=74598110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 74598111 . T . PASS END=74598303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:29:0,83,1041:0,83,255:40,0 chr2 74598664 . C . PASS END=74598672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 74598673 . G . PASS END=74598674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 74598675 . A . PASS END=74598683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr2 74598684 . G . PASS END=74598699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 74598700 . A . PASS END=74598831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr2 74598832 . C . PASS END=74598855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:7:0,21,263:0,21,255:9,0 chr2 74600055 . C . PASS END=74600075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,110,1426:0,110,255:40,0 chr2 74600078 . G . PASS END=74600078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 74601450 . C . PASS END=74601479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,105,1465:0,105,255:40,0 chr2 74603863 . C . PASS END=74603863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 74603868 . C . PASS END=74603889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:53:0,120,1800:0,142,255:40,0 chr2 74603899 . G . PASS END=74603899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 74604559 . C . PASS END=74604560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1333:0,105,255:35,0 chr2 74604561 . G . PASS END=74604561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:32,0 chr2 74604562 . T . PASS END=74604567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1227:0,91,255:35,0 chr2 74604568 . A . PASS END=74604568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1069:0,74,255:32,0 chr2 74604569 . G . PASS END=74604593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,91,255:35,0 chr2 74604775 . C . PASS END=74604853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:61:0,120,1800:0,159,255:40,0 chr2 74605126 . C . PASS END=74605267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:36:0,96,1440:0,104,255:40,0 chr2 74605268 . A . PASS END=74605268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:31,0 chr2 74605269 . T . PASS END=74605269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 74605270 . A . PASS END=74605270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:31,0 chr2 74605271 . G . PASS END=74605280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:31,0 chr2 74605281 . C . PASS END=74605281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:29,0 chr2 74605282 . C . PASS END=74605299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1103:0,90,255:30,0 chr2 74605300 . T . PASS END=74605316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:23:0,63,945:0,69,255:23,0 chr2 74605317 . C . PASS END=74605348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,47,255:19,0 chr2 74605349 . A . PASS END=74605356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74605357 . T . PASS END=74605357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 74605358 . G . PASS END=74605372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,480:0,39,255:13,0 chr2 74607129 . T . PASS END=74607129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:31,0 chr2 74607132 . C . PASS END=74607164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,98,255:34,0 chr2 74607326 . C . PASS END=74607326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 74607330 . T . PASS END=74607330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 74607426 . T . PASS END=74607427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:25,0 chr2 74607445 . G . PASS END=74607445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr2 74607626 . C . PASS END=74607630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr2 74607631 . C . PASS END=74607631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:32,0 chr2 74607632 . T . PASS END=74607668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:34,0 chr2 74607669 . C . PASS END=74607679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:26,0 chr2 74617710 . C . PASS END=74617754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:40:0,94,1463:0,94,255:40,0 chr2 74635335 . T . PASS END=74635340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:88:0,120,1800:0,234,255:40,0 chr2 74639775 . C . PASS END=74639863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:39:0,82,1375:0,82,255:40,0 chr2 74641456 . T . PASS END=74641705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:32:0,80,1139:0,80,255:40,0 chr2 74641706 . T . PASS END=74641706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr2 74641707 . C . PASS END=74641720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:31:0,84,1105:0,86,255:31,0 chr2 74641721 . C . PASS END=74641722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:32:0,75,1125:0,96,255:26,0 chr2 74641723 . C . PASS END=74641730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:27,0 chr2 74641731 . G . PASS END=74641732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1078:0,77,255:28,0 chr2 74641733 . A . PASS END=74641733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74641734 . C . PASS END=74641734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 74641735 . G . PASS END=74641744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 74641745 . C . PASS END=74641745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 74641746 . C . PASS END=74641748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74641749 . C . PASS END=74641765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:26:0,71,903:0,71,255:26,0 chr2 74641766 . A . PASS END=74641766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 74641767 . G . PASS END=74641767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 74641768 . C . PASS END=74641768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 74641769 . T . PASS END=74641771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 74641772 . G . PASS END=74641777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 74641778 . C . PASS END=74641779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 74641780 . C . PASS END=74641783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr2 74641784 . C . PASS END=74641784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:26,0 chr2 74641785 . A . PASS END=74641785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74641786 . A . PASS END=74641786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:6:28:0,6,770:0,6,255:23,0 chr2 74641787 . C . PASS END=74641808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,939:0,67,255:26,0 chr2 74641809 . G . PASS END=74641809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74641810 . C . PASS END=74641814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 74641815 . G . PASS END=74641816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,1008:0,57,255:25,0 chr2 74641817 . T . PASS END=74641822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 74641823 . C . PASS END=74641823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr2 74641824 . T . PASS END=74641824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 74641825 . G . PASS END=74641825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 74641826 . C . PASS END=74641828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 74641829 . C . PASS END=74641847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,930:0,62,255:26,0 chr2 74641848 . G . PASS END=74641848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 74641849 . C . PASS END=74641849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:25,0 chr2 74641850 . A . PASS END=74641850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:27,0 chr2 74641851 . C . PASS END=74641852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 74641853 . G . PASS END=74641853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74641854 . G . PASS END=74641864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 74641865 . A . PASS END=74641873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1063:0,74,255:26,0 chr2 74641874 . A . PASS END=74641874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74641875 . T . PASS END=74641875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 74641876 . C . PASS END=74641877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74641878 . T . PASS END=74641894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,832:0,64,255:24,0 chr2 74641895 . A . PASS END=74641895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 74641896 . G . PASS END=74641904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 74641905 . C . PASS END=74641905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr2 74641906 . G . PASS END=74641911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 74641912 . T . PASS END=74641912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 74641913 . G . PASS END=74641919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 74641920 . A . PASS END=74641920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 74641921 . T . PASS END=74641921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 74641922 . A . PASS END=74641922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,703:0,38,255:22,0 chr2 74641923 . G . PASS END=74641940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,854:0,72,255:24,0 chr2 74641941 . G . PASS END=74641941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:22,0 chr2 74641942 . G . PASS END=74641952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr2 74641953 . C . PASS END=74641986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,621:0,51,255:19,0 chr2 74641987 . T . PASS END=74641987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74641988 . G . PASS END=74641989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74641990 . C . PASS END=74642031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,31,255:13,0 chr2 74642032 . G . PASS END=74642035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 74642036 . A . PASS END=74642046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74642047 . T . PASS END=74642047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 74642048 . T . PASS END=74642058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 74642059 . C . PASS END=74642059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74642060 . T . PASS END=74642060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 74642061 . T . PASS END=74642065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74642066 . T . PASS END=74642066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 74642067 . T . PASS END=74642082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 74642083 . T . PASS END=74642083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 74642084 . C . PASS END=74642093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 74642094 . C . PASS END=74642115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,495:0,40,255:19,0 chr2 74642116 . G . PASS END=74642118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 74642119 . T . PASS END=74642119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 74642120 . G . PASS END=74642125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 74642126 . A . PASS END=74642128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 74642129 . A . PASS END=74642157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:24,0 chr2 74642158 . C . PASS END=74642158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 74642159 . G . PASS END=74642163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:26,0 chr2 74642164 . C . PASS END=74642167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 74642168 . G . PASS END=74642194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,899:0,62,255:26,0 chr2 74642195 . T . PASS END=74642202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 74642203 . C . PASS END=74642203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74642204 . A . PASS END=74642224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr2 74642225 . A . PASS END=74642225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 74642226 . G . PASS END=74642230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74642231 . A . PASS END=74642298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,892:0,61,255:26,0 chr2 74642299 . G . PASS END=74642315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 74642316 . C . PASS END=74642316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 74642317 . C . PASS END=74642323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 74642324 . A . PASS END=74642324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:29,0 chr2 74642325 . T . PASS END=74642331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 74642332 . C . PASS END=74642387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 74642388 . A . PASS END=74642433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr2 74642434 . C . PASS END=74642436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 74642437 . C . PASS END=74642458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:7:0,21,263:0,21,255:9,0 chr2 74642459 . G . PASS END=74642492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,194:6,0 chr2 74642493 . C . PASS END=74642499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 74642500 . A . PASS END=74642500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 74642501 . G . PASS END=74642511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 74642512 . C . PASS END=74642512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 74642513 . A . PASS END=74642519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 74642520 . G . PASS END=74642545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:12,0 chr2 74642546 . G . PASS END=74642555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr2 74642556 . G . PASS END=74642557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74642558 . C . PASS END=74642559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74642560 . T . PASS END=74642562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74642563 . A . PASS END=74642566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74642567 . T . PASS END=74642567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 74642568 . G . PASS END=74642579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 74642580 . C . PASS END=74642601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,488:0,39,255:13,0 chr2 74642602 . T . PASS END=74642602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 74642603 . G . PASS END=74642608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 74642609 . T . PASS END=74642609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 74642610 . G . PASS END=74642620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 74642621 . G . PASS END=74642640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,492:0,45,255:15,0 chr2 74642641 . C . PASS END=74642654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 74642655 . G . PASS END=74642656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr2 74642657 . G . PASS END=74642657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 74642658 . G . PASS END=74642659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 74642660 . G . PASS END=74642660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 74642661 . A . PASS END=74642661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74642662 . A . PASS END=74642662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 74642663 . G . PASS END=74642683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr2 74642684 . T . PASS END=74642684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74642685 . C . PASS END=74642762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,615:0,40,255:18,0 chr2 74642763 . G . PASS END=74642763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 74642764 . G . PASS END=74642764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74642765 . C . PASS END=74642765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr2 74642766 . A . PASS END=74642771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74642772 . A . PASS END=74642772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 74642773 . T . PASS END=74642782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74642783 . G . PASS END=74642783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74642784 . G . PASS END=74642794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 74642795 . G . PASS END=74642808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 74642809 . G . PASS END=74642839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr2 74642840 . C . PASS END=74642856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:24,0 chr2 74642857 . G . PASS END=74642857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 74642858 . C . PASS END=74642864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,930:0,72,255:26,0 chr2 74642865 . A . PASS END=74642891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr2 74642892 . A . PASS END=74642892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr2 74642893 . A . PASS END=74642909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 74642910 . C . PASS END=74642911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74642912 . G . PASS END=74642924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1157:0,90,255:31,0 chr2 74642925 . A . PASS END=74642925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 74642926 . A . PASS END=74642971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1226:0,81,255:37,0 chr2 74642972 . T . PASS END=74642972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:29,0 chr2 74642973 . C . PASS END=74642978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1247:0,89,255:32,0 chr2 74642979 . C . PASS END=74642980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 74642981 . T . PASS END=74642994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:33,0 chr2 74642995 . G . PASS END=74642995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 74642996 . C . PASS END=74643000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 74643001 . C . PASS END=74643001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 74643002 . T . PASS END=74643002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74643003 . C . PASS END=74643003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 74643004 . G . PASS END=74643007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74643008 . A . PASS END=74643008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr2 74643009 . T . PASS END=74643010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74643011 . T . PASS END=74643015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1016:0,71,255:26,0 chr2 74643016 . C . PASS END=74643016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74643017 . A . PASS END=74643042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,880:0,68,255:26,0 chr2 74643043 . G . PASS END=74643043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 74643044 . A . PASS END=74643044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 74643045 . A . PASS END=74643046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr2 74643047 . G . PASS END=74643054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,931:0,64,255:22,0 chr2 74643138 . C . PASS END=74643146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 74643147 . C . PASS END=74643213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,806:0,63,255:26,0 chr2 74643214 . T . PASS END=74643214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 74643215 . C . PASS END=74643238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,915:0,65,255:26,0 chr2 74643239 . G . PASS END=74643239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 74643240 . C . PASS END=74643240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 74643241 . G . PASS END=74643244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 74643245 . T . PASS END=74643249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 74643250 . T . PASS END=74643250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:22,0 chr2 74643251 . C . PASS END=74643279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:26:0,63,897:0,64,255:26,0 chr2 74643280 . T . PASS END=74643290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 74643291 . C . PASS END=74643295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 74643296 . G . PASS END=74643296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:24,0 chr2 74643297 . C . PASS END=74643325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr2 74643326 . T . PASS END=74643326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 74643327 . G . PASS END=74643334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 74643335 . T . PASS END=74643342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:18,0 chr2 74643343 . C . PASS END=74643343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:14,0 chr2 74643344 . G . PASS END=74643367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,630:0,41,255:15,0 chr2 74643368 . T . PASS END=74643368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:14,0 chr2 74644509 . C . PASS END=74644509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 74644510 . T . PASS END=74644510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr2 74644511 . G . PASS END=74644515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74644516 . A . PASS END=74644532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 74644533 . C . PASS END=74644533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 74644534 . A . PASS END=74644534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 74644535 . T . PASS END=74644535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 74645468 . C . PASS END=74645563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,98,255:40,0 chr2 74645564 . G . PASS END=74645569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:24,0 chr2 74648670 . C . PASS END=74648681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:17,0 chr2 74648682 . C . PASS END=74648682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 74648683 . G . PASS END=74648686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:17,0 chr2 74648687 . T . PASS END=74648687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 74648878 . A . PASS END=74648887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:31,0 chr2 74648888 . C . PASS END=74648888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 74648889 . G . PASS END=74648943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1178:0,89,255:33,0 chr2 74649280 . G . PASS END=74649308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,861:0,66,255:24,0 chr2 74649309 . T . PASS END=74649315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 74649316 . C . PASS END=74649316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74649317 . T . PASS END=74649341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:19,0 chr2 74649342 . T . PASS END=74649344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 74649345 . G . PASS END=74649397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,566:0,45,255:19,0 chr2 74649398 . C . PASS END=74649423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:21,0 chr2 74649424 . T . PASS END=74649424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 74649425 . C . PASS END=74649434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 74649435 . T . PASS END=74649437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74649438 . C . PASS END=74649446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74649447 . A . PASS END=74649496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,545:0,48,255:19,0 chr2 74649497 . A . PASS END=74649497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 74649498 . C . PASS END=74649502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 74649997 . G . PASS END=74650059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:97:43:0,97,1629:0,97,255:40,0 chr2 74650446 . A . PASS END=74650457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:23,0 chr2 74650458 . A . PASS END=74650458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:21,0 chr2 74650459 . A . PASS END=74650460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr2 74650461 . G . PASS END=74650469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74650470 . A . PASS END=74650470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:25,0 chr2 74650471 . T . PASS END=74650471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74650472 . G . PASS END=74650473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:29,0 chr2 74650474 . T . PASS END=74650474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr2 74650475 . C . PASS END=74650477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 74650478 . C . PASS END=74650478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:27,0 chr2 74650479 . T . PASS END=74650488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr2 74650489 . T . PASS END=74650489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:28,0 chr2 74650490 . G . PASS END=74650508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 74650509 . C . PASS END=74650512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74650605 . T . PASS END=74650622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1210:0,86,255:34,0 chr2 74650623 . G . PASS END=74650623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr2 74650624 . G . PASS END=74650654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,89,255:34,0 chr2 74650655 . G . PASS END=74650655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:26,0 chr2 74650656 . T . PASS END=74650658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74650982 . G . PASS END=74650985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 74650986 . G . PASS END=74650991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 74650992 . A . PASS END=74650992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:26,0 chr2 74650993 . G . PASS END=74650993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74650994 . G . PASS END=74650996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74650997 . G . PASS END=74650997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74650998 . G . PASS END=74651050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1196:0,87,255:34,0 chr2 74651051 . A . PASS END=74651052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 74651053 . C . PASS END=74651058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74651059 . G . PASS END=74651109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,717:0,63,255:26,0 chr2 74652002 . G . PASS END=74652102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:34:0,88,1187:0,88,255:40,0 chr2 74652202 . A . PASS END=74652340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1186:0,83,255:40,0 chr2 74652341 . G . PASS END=74652341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 74652342 . A . PASS END=74652343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74652344 . C . PASS END=74652364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr2 74652544 . C . PASS END=74652546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr2 74652547 . C . PASS END=74652547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1277:0,75,255:31,0 chr2 74652548 . T . PASS END=74652602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:32:0,86,1241:0,86,255:35,0 chr2 74652603 . G . PASS END=74652603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 74652604 . A . PASS END=74652615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1150:0,96,255:32,0 chr2 74652616 . G . PASS END=74652618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 74652697 . G . PASS END=74652703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr2 74652704 . A . PASS END=74652704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 74652705 . C . PASS END=74652721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr2 74652722 . T . PASS END=74652723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 74652724 . G . PASS END=74652724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 74652725 . C . PASS END=74652727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 74652728 . A . PASS END=74652728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 74652729 . C . PASS END=74652732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:30,0 chr2 74652733 . C . PASS END=74652733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 74652734 . A . PASS END=74652740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1241:0,86,255:34,0 chr2 74652741 . T . PASS END=74652741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:33,0 chr2 74652742 . G . PASS END=74652743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 74652744 . T . PASS END=74652744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr2 74652745 . G . PASS END=74652809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1150:0,83,255:34,0 chr2 74652810 . G . PASS END=74652814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 74652815 . T . PASS END=74652821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 74652822 . T . PASS END=74652822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1023:0,51,255:26,0 chr2 74652823 . G . PASS END=74652823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74652824 . T . PASS END=74652828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 74653370 . T . PASS END=74653378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 74653379 . T . PASS END=74653379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 74653380 . G . PASS END=74653386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,647:0,54,255:19,0 chr2 74653387 . G . PASS END=74653421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr2 74653422 . C . PASS END=74653438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 74653439 . C . PASS END=74653451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr2 74653452 . G . LowGQ END=74653452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr2 74653453 . G . PASS END=74653463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 74653464 . C . PASS END=74653481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,235:9,0 chr2 74653482 . T . PASS END=74653482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr2 74653483 . C . PASS END=74653518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,243:0,24,235:8,0 chr2 74653519 . T . PASS END=74653519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,180:0,7,180:6,0 chr2 74653520 . C . PASS END=74653523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 74653524 . C . PASS END=74653524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,286:0,13,255:8,0 chr2 74653525 . A . LowGQ END=74653525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,202:3,0,206:7,0 chr2 74653526 . G . PASS END=74653529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 74653530 . A . LowGQ END=74653530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,184:20,0,203:7,0 chr2 74653531 . G . PASS END=74653538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr2 74653539 . G . PASS END=74653540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74653541 . C . PASS END=74653542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 74653543 . A . PASS END=74653581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr2 74653582 . T . PASS END=74653582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 74653583 . A . PASS END=74653588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 74653589 . G . PASS END=74653589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 74653590 . G . PASS END=74653595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:18,0 chr2 74653596 . T . PASS END=74653596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 74653597 . G . PASS END=74653597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:18,0 chr2 74653598 . G . PASS END=74653605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 74653606 . A . PASS END=74653606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr2 74653607 . C . PASS END=74653608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 74653609 . T . PASS END=74653610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 74653611 . G . PASS END=74653611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 74653612 . C . PASS END=74653629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,668:0,57,255:19,0 chr2 74653630 . T . PASS END=74653644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,825:0,66,255:23,0 chr2 74653645 . C . PASS END=74653645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 74653646 . C . PASS END=74653660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,892:0,72,255:24,0 chr2 74653661 . G . PASS END=74653662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,734:0,41,255:19,0 chr2 74653663 . T . PASS END=74653669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 74653670 . C . PASS END=74653670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,815:0,41,255:22,0 chr2 74653671 . A . PASS END=74653671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 74653672 . C . PASS END=74653672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:21,0 chr2 74653673 . C . PASS END=74653676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74653677 . G . PASS END=74653701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 74653774 . T . PASS END=74653777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 74653778 . C . PASS END=74653778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr2 74653779 . T . PASS END=74653780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr2 74653781 . T . PASS END=74653781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 74653782 . C . PASS END=74653784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr2 74653785 . T . PASS END=74653787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1055:0,60,255:30,0 chr2 74653788 . A . PASS END=74653793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:32,0 chr2 74653794 . A . PASS END=74653794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:31,0 chr2 74653795 . G . PASS END=74653803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:32,0 chr2 74653804 . A . PASS END=74653804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1084:0,66,255:29,0 chr2 74653805 . G . PASS END=74653809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1105:0,82,255:30,0 chr2 74653810 . G . PASS END=74653810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1092:0,44,255:30,0 chr2 74653811 . A . PASS END=74653813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr2 74653814 . T . PASS END=74653814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:30,0 chr2 74653815 . C . PASS END=74653882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:32,0 chr2 74653883 . A . PASS END=74653883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:25,0 chr2 74653884 . A . PASS END=74653884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:24,0 chr2 74653885 . G . PASS END=74653885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 74653886 . A . PASS END=74653886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74654084 . T . PASS END=74654121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:89:0,120,1800:0,221,255:40,0 chr2 74654296 . C . PASS END=74654400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,102,1530:0,114,255:40,0 chr2 74654551 . T . PASS END=74654561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,884:0,72,255:26,0 chr2 74654562 . A . PASS END=74654563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 74654564 . A . PASS END=74654564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 74654565 . A . PASS END=74654566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 74654567 . C . PASS END=74654587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 74654588 . G . PASS END=74654615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1125:0,80,255:32,0 chr2 74654616 . T . PASS END=74654616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:30,0 chr2 74654617 . G . PASS END=74654634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:32,0 chr2 74654635 . C . PASS END=74654635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 74654636 . A . PASS END=74654646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 74654647 . A . PASS END=74654647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:27,0 chr2 74654648 . C . PASS END=74654652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 74654653 . T . PASS END=74654653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr2 74654654 . A . PASS END=74654657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 74654658 . A . PASS END=74654661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 74654662 . T . PASS END=74654662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:23,0 chr2 74654663 . T . PASS END=74654672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:23,0 chr2 74654673 . G . PASS END=74654674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,845:0,41,255:21,0 chr2 74654675 . C . PASS END=74654686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 74654687 . C . PASS END=74654687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 74654688 . T . PASS END=74654690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 74654691 . T . PASS END=74654691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 74654692 . C . PASS END=74654692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 74654693 . C . PASS END=74654693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 74654694 . A . PASS END=74654699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 74654700 . C . PASS END=74654714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr2 74654715 . G . PASS END=74654716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74654717 . C . PASS END=74654717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 74654718 . T . PASS END=74654719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr2 74655395 . C . PASS END=74655523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:33:0,93,1219:0,96,255:40,0 chr2 74655758 . C . PASS END=74655780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:35,0 chr2 74655781 . C . PASS END=74655781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr2 74655782 . A . PASS END=74655805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1334:0,100,255:37,0 chr2 74655806 . C . PASS END=74655806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:37,0 chr2 74655807 . T . PASS END=74655837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,94,255:37,2 chr2 74655838 . A . PASS END=74655838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1157:0,36,255:31,2 chr2 74655839 . A . PASS END=74655840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:63:34:0,63,923:0,63,255:29,0 chr2 74655841 . G . PASS END=74655848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr2 74655849 . C . PASS END=74655849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 74655850 . A . PASS END=74655854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 74655855 . G . PASS END=74655856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74655857 . G . PASS END=74655857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74655858 . T . PASS END=74655858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 74655859 . T . PASS END=74655864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:33,0 chr2 74655975 . C . PASS END=74656069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,108,1499:0,110,255:40,0 chr2 74656955 . C . PASS END=74656958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr2 74656959 . C . PASS END=74656978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:18,0 chr2 74656979 . A . PASS END=74656979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 74656980 . T . PASS END=74656997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr2 74656998 . C . PASS END=74657028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr2 74657029 . C . PASS END=74657123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:19,0 chr2 74657124 . A . PASS END=74657124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 74657125 . C . PASS END=74657148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,471:0,45,255:16,0 chr2 74657149 . T . PASS END=74657149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 74657150 . G . PASS END=74657151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74657152 . C . PASS END=74657152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 74657153 . C . PASS END=74657153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74657154 . C . PASS END=74657164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74657379 . A . PASS END=74657491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,89,255:38,0 chr2 74657492 . C . PASS END=74657496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1108:0,77,255:26,0 chr2 74657592 . C . PASS END=74657602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1072:0,90,255:30,0 chr2 74657603 . T . PASS END=74657603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:29,0 chr2 74657604 . T . PASS END=74657618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1085:0,90,255:30,0 chr2 74657619 . C . PASS END=74657645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,945:0,62,255:25,0 chr2 74657743 . C . PASS END=74657746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr2 74657747 . G . PASS END=74657747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 74657748 . A . PASS END=74657762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,815:0,66,255:24,0 chr2 74657763 . C . PASS END=74657763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr2 74657764 . G . PASS END=74657781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr2 74657782 . C . PASS END=74657782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 74657783 . G . PASS END=74657799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,847:0,69,255:24,0 chr2 74657800 . A . PASS END=74657800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr2 74657801 . A . PASS END=74657801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr2 74657802 . G . PASS END=74657804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 74659594 . C . PASS END=74659629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,558:0,41,255:19,0 chr2 74659630 . C . PASS END=74659631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 74659632 . C . PASS END=74659637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,53,255:18,0 chr2 74659638 . C . PASS END=74659643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 74659644 . G . PASS END=74659644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 74659645 . C . PASS END=74659670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 74659671 . G . PASS END=74659671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:21,0 chr2 74659672 . C . PASS END=74659684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 74659685 . T . PASS END=74659685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 74659686 . C . PASS END=74659732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,892:0,62,255:26,0 chr2 74659733 . G . PASS END=74659734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 74659735 . T . PASS END=74659735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 74659736 . T . PASS END=74659739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 74659740 . G . PASS END=74659769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,728:0,71,255:26,0 chr2 74659770 . T . PASS END=74659770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 74659771 . A . PASS END=74659777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 74659778 . T . PASS END=74659793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:20:0,54,810:0,56,255:19,0 chr2 74666678 . C . PASS END=74666749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,122,255:40,0 chr2 74668833 . C . PASS END=74668839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 74668840 . A . PASS END=74668845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr2 74668846 . C . PASS END=74668846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 74668847 . T . PASS END=74668848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 74668849 . A . PASS END=74668849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 74668850 . A . PASS END=74668859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 74668860 . T . PASS END=74668860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 74668861 . C . PASS END=74668868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 74668869 . G . PASS END=74668869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr2 74668870 . C . PASS END=74668874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 74668875 . T . PASS END=74668875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,685:0,55,255:20,0 chr2 74668876 . T . PASS END=74668879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74668880 . A . PASS END=74668880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr2 74668881 . C . PASS END=74668915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,878:0,66,255:24,0 chr2 74668916 . C . PASS END=74668928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 74668929 . G . PASS END=74668938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 74668939 . A . PASS END=74668939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr2 74668940 . A . PASS END=74668940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 74668941 . C . PASS END=74668943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74682244 . A . PASS END=74682246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74682247 . A . PASS END=74682252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74682253 . C . PASS END=74682269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1108:0,84,255:29,0 chr2 74682270 . C . PASS END=74682271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74682272 . C . PASS END=74682287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1205:0,88,255:34,0 chr2 74682288 . G . PASS END=74682301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:26:0,64,1080:0,64,255:26,0 chr2 74682518 . G . PASS END=74682524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr2 74682525 . T . PASS END=74682537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:26,0 chr2 74682538 . G . PASS END=74682653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:28:0,84,1041:0,84,255:40,0 chr2 74682654 . G . PASS END=74682654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1751:0,73,255:40,0 chr2 74682655 . C . PASS END=74682683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,111,1665:0,116,255:40,0 chr2 74682684 . A . PASS END=74682684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:64:43:0,64,1194:0,64,255:38,0 chr2 74682685 . C . PASS END=74682706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:36:0,80,1259:0,80,255:39,0 chr2 74682707 . A . PASS END=74682725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:26:0,63,931:0,64,255:26,0 chr2 74682945 . T . PASS END=74683066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1188:0,87,255:40,0 chr2 74683067 . A . PASS END=74683067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:30,0 chr2 74683068 . G . PASS END=74683077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr2 74683230 . A . PASS END=74683236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 74683237 . C . PASS END=74683242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,87,255:30,0 chr2 74683243 . T . PASS END=74683243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:28,0 chr2 74683244 . C . PASS END=74683244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 74683245 . T . PASS END=74683245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1040:0,79,255:29,0 chr2 74683246 . C . PASS END=74683249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr2 74683250 . C . PASS END=74683250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:30,0 chr2 74683251 . C . PASS END=74683275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:35,0 chr2 74683276 . A . PASS END=74683276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr2 74683277 . G . PASS END=74683377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:31:0,80,1185:0,80,255:40,0 chr2 74683378 . G . PASS END=74683399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,990:0,72,255:26,0 chr2 74684461 . C . PASS END=74684465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:11,0 chr2 74684466 . T . PASS END=74684466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 74684467 . C . PASS END=74684468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 74684469 . G . PASS END=74684483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,449:0,36,255:13,0 chr2 74684484 . G . PASS END=74684517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,568:0,45,255:18,0 chr2 74684518 . G . PASS END=74684518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74684519 . C . PASS END=74684519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 74684520 . T . PASS END=74684521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74684522 . A . PASS END=74684522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 74684523 . G . PASS END=74684528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 74684529 . C . PASS END=74684529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 74684530 . C . PASS END=74684531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74684532 . A . PASS END=74684532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 74684533 . C . PASS END=74684535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74684536 . C . PASS END=74684536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 74684537 . C . PASS END=74684539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr2 74684540 . C . PASS END=74684540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 74684541 . C . PASS END=74684555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,922:0,62,255:24,0 chr2 74684556 . G . PASS END=74684556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr2 74684557 . C . PASS END=74684557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 74684558 . T . PASS END=74684558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr2 74684559 . G . PASS END=74684559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr2 74684560 . C . PASS END=74684567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,908:0,61,255:26,0 chr2 74684568 . C . PASS END=74684569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74684570 . A . PASS END=74684571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74684572 . G . PASS END=74684576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74684577 . G . PASS END=74684577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 74684578 . G . PASS END=74684585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr2 74684586 . G . PASS END=74684586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 74684587 . C . PASS END=74684590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 74684591 . G . PASS END=74684591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 74684592 . G . PASS END=74684592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr2 74684593 . C . PASS END=74684593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 74684594 . T . PASS END=74684595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1103:0,90,255:31,0 chr2 74684596 . C . PASS END=74684596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 74684597 . A . PASS END=74684604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74684605 . C . PASS END=74684605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:29,0 chr2 74684606 . G . PASS END=74684622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:31:0,83,1142:0,83,255:32,0 chr2 74684623 . A . PASS END=74684623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1029:0,46,255:26,0 chr2 74684624 . A . PASS END=74684626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:28,0 chr2 74684627 . A . PASS END=74684627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:26,0 chr2 74684628 . C . PASS END=74684628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 74684629 . C . PASS END=74684629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:27,0 chr2 74684630 . A . PASS END=74684635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 74684636 . T . PASS END=74684636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:27,0 chr2 74684637 . C . PASS END=74684637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 74684638 . G . PASS END=74684638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 74684639 . A . PASS END=74684642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr2 74684643 . C . PASS END=74684645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 74684646 . C . PASS END=74684646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 74684647 . A . PASS END=74684647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:50:33:0,50,1098:0,50,255:24,0 chr2 74684648 . C . PASS END=74684649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 74684650 . A . PASS END=74684650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1064:0,44,255:25,0 chr2 74684651 . A . PASS END=74684655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:28:0,82,974:0,82,255:28,0 chr2 74684656 . G . PASS END=74684656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 74684657 . C . PASS END=74684657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74684658 . G . PASS END=74684658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 74684659 . G . PASS END=74684662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74684663 . C . PASS END=74684696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:26,0 chr2 74684697 . C . PASS END=74684697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 74684698 . G . PASS END=74684698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 74684699 . A . PASS END=74684700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:23,0 chr2 74684701 . C . PASS END=74684738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,833:0,72,255:25,0 chr2 74684739 . G . PASS END=74684739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr2 74684740 . C . PASS END=74684758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 74684759 . A . PASS END=74684759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:18,0 chr2 74684760 . G . PASS END=74684774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:18:0,43,668:0,43,255:17,0 chr2 74684775 . C . PASS END=74684775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 74684776 . T . PASS END=74684842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,560:0,48,255:18,0 chr2 74684843 . G . PASS END=74684843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 74684844 . C . PASS END=74684854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 74684855 . C . PASS END=74684855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74684856 . C . PASS END=74684857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74684858 . G . PASS END=74684882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr2 74684883 . T . PASS END=74684883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 74684884 . T . PASS END=74684885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 74684886 . C . PASS END=74684894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 74684895 . A . PASS END=74684895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74684896 . G . PASS END=74684900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74684901 . G . PASS END=74684903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 74684904 . A . PASS END=74684911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74684912 . G . PASS END=74684941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 74684942 . T . PASS END=74684963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,327:0,27,255:9,0 chr2 74684964 . T . PASS END=74684979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:6:0,12,180:0,18,210:6,0 chr2 74684980 . T . PASS END=74684986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:1:5:0,1,135:0,1,177:3,0 chr2 74684987 . C . PASS END=74684991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:5,0 chr2 74685730 . A . PASS END=74685737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,937:0,62,255:26,0 chr2 74685738 . G . PASS END=74685744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 74685745 . A . PASS END=74685745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 74685746 . G . PASS END=74685751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 74685752 . A . PASS END=74685752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:26,0 chr2 74685753 . C . PASS END=74685756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr2 74685757 . A . PASS END=74685757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 74685758 . G . PASS END=74685760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 74685761 . A . PASS END=74685765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74685766 . G . PASS END=74685794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 74685795 . G . PASS END=74685798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 74685999 . A . PASS END=74686004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 74686005 . G . PASS END=74686012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 74686013 . A . PASS END=74686021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 74686022 . T . PASS END=74686026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74686027 . C . PASS END=74686037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr2 74686038 . A . PASS END=74686040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 74686041 . G . PASS END=74686041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74686042 . G A, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.287;ReadPosRankSum=1.763;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,22,0:0.710,0.000:31:6,14,0:3,8,0:40:85,0,38,724,285,1010:255,0,226:8,0:5.0000e+01,4.1057e-04,4.0729e+01,4.5000e+02,3.1987e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,12,10:4,5,12,10 chr2 74686043 . C . PASS END=74686049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74686050 . A . PASS END=74686058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr2 74686059 . G . PASS END=74686066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr2 74686067 . C . PASS END=74686067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr2 74686068 . C . PASS END=74686069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 74686070 . C . PASS END=74686079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,963:0,67,255:26,0 chr2 74686080 . A . PASS END=74686100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,901:0,62,255:26,0 chr2 74686101 . C . PASS END=74686102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74686103 . A . PASS END=74686113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,964:0,70,255:26,0 chr2 74686114 . G . PASS END=74686152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1158:0,85,255:31,0 chr2 74686153 . A . PASS END=74686153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 74686154 . A . PASS END=74686201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1166:0,83,255:35,0 chr2 74686202 . T . PASS END=74686202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1121:0,66,255:28,0 chr2 74686203 . A . PASS END=74686212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1133:0,82,255:31,0 chr2 74686213 . G . PASS END=74686235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr2 74686236 . C . PASS END=74686244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,52,255:19,0 chr2 74686770 . C . PASS END=74686867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,88,255:40,0 chr2 74686868 . C . PASS END=74686872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,77,255:25,0 chr2 74687000 . G . PASS END=74687006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74687007 . G . PASS END=74687009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:12,0 chr2 74687010 . G . PASS END=74687041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,681:0,41,255:18,0 chr2 74687042 . G . PASS END=74687042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 74687043 . T . PASS END=74687049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 74687050 . T . PASS END=74687050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 74687051 . T . PASS END=74687063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr2 74687064 . A . PASS END=74687064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 74687065 . G . PASS END=74687083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,566:0,48,255:16,0 chr2 74687084 . A . PASS END=74687084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 74687085 . A . PASS END=74687088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,529:0,48,255:16,0 chr2 74687089 . C . PASS END=74687089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr2 74687090 . A . PASS END=74687117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr2 74687118 . C . PASS END=74687119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr2 74687120 . A . PASS END=74687135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,460:0,42,255:14,0 chr2 74687136 . T . PASS END=74687136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 74687137 . G . PASS END=74687144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 74687145 . T . PASS END=74687146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr2 74687147 . C . PASS END=74687148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 74687149 . T . PASS END=74687159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 74687160 . T . PASS END=74687176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 74687348 . G . PASS END=74687351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 74687352 . C . PASS END=74687389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 74687390 . T . PASS END=74687390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr2 74687391 . T . PASS END=74687408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 74687409 . A . LowGQ END=74687411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,189:8,0,200:10,1 chr2 74687412 . C . PASS END=74687414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74687415 . C . PASS END=74687415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 74687416 . C . PASS END=74687416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr2 74687417 . C . PASS END=74687417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74687418 . T . PASS END=74687419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:12,0 chr2 74687420 . A . PASS END=74687421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74687422 . A . PASS END=74687424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:14,0 chr2 74687425 . G . PASS END=74687426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr2 74687427 . G . PASS END=74687427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 74687428 . G . PASS END=74687428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 74687429 . C . PASS END=74687432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 74687433 . A . PASS END=74687433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr2 74687434 . G . PASS END=74687439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:14:0,31,543:0,31,255:14,0 chr2 74687440 . C . PASS END=74687443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 74687444 . T . PASS END=74687444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr2 74687445 . G . PASS END=74687445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74687446 . A . PASS END=74687446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr2 74687447 . C . PASS END=74687449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 74687450 . C . PASS END=74687452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 74687453 . C . PASS END=74687454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr2 74687455 . A . PASS END=74687455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 74687456 . G . PASS END=74687456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74687457 . T . PASS END=74687457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:13,0 chr2 74687458 . G . PASS END=74687461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74687462 . A . PASS END=74687462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 74687463 . A . PASS END=74687466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74687467 . T . PASS END=74687468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 74687469 . C . PASS END=74687473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,492:0,45,255:16,0 chr2 74687474 . C . LowGQ END=74687474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,388:16,0,255:13,0 chr2 74687475 . C . PASS END=74687476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 74687477 . C . PASS END=74687477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 74687478 . C . PASS END=74687478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 74687479 . T . PASS END=74687479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 74687480 . C . PASS END=74687484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:17,0 chr2 74687485 . A . PASS END=74687486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 74687487 . C . PASS END=74687499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,592:0,40,255:19,0 chr2 74687500 . T . PASS END=74687500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,607:0,21,255:18,0 chr2 74687501 . T . PASS END=74687506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:19,0 chr2 74687507 . G . PASS END=74687509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74687510 . C . PASS END=74687511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 74687512 . A . PASS END=74687513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74687514 . T . PASS END=74687515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:19,0 chr2 74687516 . T . PASS END=74687520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 74687521 . G . PASS END=74687521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 74687522 . G . PASS END=74687524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74687525 . T . PASS END=74687525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 74687526 . T . PASS END=74687529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 74687530 . T . PASS END=74687530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:22,0 chr2 74687531 . C . PASS END=74687545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,969:0,65,255:26,0 chr2 74687546 . C . PASS END=74687548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74687549 . C . PASS END=74687569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr2 74687570 . G . PASS END=74687570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr2 74687571 . G . PASS END=74687596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:31,0 chr2 74687597 . C . PASS END=74687598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1003:0,41,255:29,0 chr2 74687599 . C . PASS END=74687610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1097:0,80,255:32,0 chr2 74687611 . T . PASS END=74687611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr2 74687612 . A . PASS END=74687618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:31,0 chr2 74687619 . T . PASS END=74687619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1052:0,79,255:29,0 chr2 74687620 . T . PASS END=74687635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:30,0 chr2 74687636 . G . PASS END=74687636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 74687637 . T . PASS END=74687637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74687638 . A . PASS END=74687638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:28,0 chr2 74687639 . T . PASS END=74687640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74687641 . G . PASS END=74687641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr2 74687642 . A . PASS END=74687642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,984:0,35,255:25,0 chr2 74687643 . G . PASS END=74687644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 74687645 . T . PASS END=74687646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr2 74687647 . T . PASS END=74687647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,973:0,54,255:25,0 chr2 74687648 . G . PASS END=74687653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr2 74687654 . G . PASS END=74687661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 74687662 . T . PASS END=74687662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr2 74687663 . C . PASS END=74687663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74687664 . C . PASS END=74687665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,984:0,67,255:26,0 chr2 74687666 . G . PASS END=74687666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74687667 . T . PASS END=74687669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:25,0 chr2 74687670 . G . PASS END=74687711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1019:0,87,255:32,0 chr2 74687712 . A . PASS END=74687713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 74687714 . A . PASS END=74687714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74687715 . T . PASS END=74687715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr2 74687716 . C . PASS END=74687733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 74687734 . T . PASS END=74687734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 74687735 . G . PASS END=74687741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74687742 . A . PASS END=74687743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74687744 . C . PASS END=74687753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1117:0,80,255:29,0 chr2 74687754 . T . PASS END=74687754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 74687755 . G . PASS END=74687764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 74687765 . T . PASS END=74687765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:26,0 chr2 74687766 . C . PASS END=74687767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74687768 . T . PASS END=74687778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1030:0,68,255:26,0 chr2 74687779 . C . PASS END=74687779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:26,0 chr2 74687780 . T . PASS END=74687786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:28,0 chr2 74687787 . C . PASS END=74687792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1053:0,71,255:26,0 chr2 74687793 . A . PASS END=74687793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74687794 . G . PASS END=74687808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr2 74688402 . T . PASS END=74688403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 74688404 . A . PASS END=74688404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr2 74688405 . G . PASS END=74688405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 74688406 . T . PASS END=74688406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr2 74688407 . A . PASS END=74688417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,492:0,42,255:18,0 chr2 74688418 . A . PASS END=74688419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr2 74688420 . G . PASS END=74688436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,584:0,40,255:19,0 chr2 74688437 . T . PASS END=74688441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 74688442 . C . PASS END=74688442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr2 74688443 . A . PASS END=74688447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 74688448 . T . PASS END=74688448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 74688449 . G . PASS END=74688449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74688450 . G . PASS END=74688451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 74688452 . A . PASS END=74688454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74688455 . G . PASS END=74688455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 74688456 . G . PASS END=74688458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74688459 . G . PASS END=74688459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 74688460 . C . PASS END=74688464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 74688465 . C . PASS END=74688465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 74688466 . A . PASS END=74688473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,907:0,75,255:25,0 chr2 74688474 . C . PASS END=74688474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 74688475 . C . PASS END=74688481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 74688482 . G . PASS END=74688482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 74688483 . G . PASS END=74688535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,864:0,72,255:25,0 chr2 74688536 . T . PASS END=74688536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 74688537 . G . PASS END=74688547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 74688548 . T . PASS END=74688548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 74688549 . G . PASS END=74688551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 74688552 . A . PASS END=74688552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 74688553 . C . PASS END=74688586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:26,0 chr2 74688587 . G . PASS END=74688588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74688589 . T . PASS END=74688589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 74688590 . G . PASS END=74688591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 74688592 . G . PASS END=74688592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74688593 . G . PASS END=74688594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74688595 . C . PASS END=74688614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 74688615 . G . PASS END=74688617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74688618 . G . PASS END=74688670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,894:0,65,255:26,0 chr2 74688671 . A . PASS END=74688671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:22,0 chr2 74688672 . G . PASS END=74688675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 74688676 . G . PASS END=74688725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1044:0,80,255:32,0 chr2 74688726 . G . PASS END=74688743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:26:0,64,925:0,64,255:27,0 chr2 74688744 . G . PASS END=74688747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74688748 . C . PASS END=74688758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1000:0,68,255:26,0 chr2 74688759 . G . PASS END=74688770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:29,0 chr2 74688771 . A . PASS END=74688771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 74688772 . A . PASS END=74688780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr2 74688781 . A . PASS END=74688781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 74688782 . G . PASS END=74688782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 74688783 . G . PASS END=74688783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr2 74688784 . G . PASS END=74688792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 74688793 . C . PASS END=74688793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74688794 . G . PASS END=74688803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 74688804 . G . PASS END=74688806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74688807 . G . PASS END=74688808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74688809 . C . PASS END=74688844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:26,0 chr2 74688845 . A . PASS END=74688847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74688848 . C . PASS END=74688859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 74688860 . C . PASS END=74688861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74688862 . T . PASS END=74688863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 74688864 . C . PASS END=74688864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74688865 . T . PASS END=74688869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74688870 . T . PASS END=74688870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74688871 . T . PASS END=74688872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74688873 . A . PASS END=74688874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74688875 . G . PASS END=74689044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,808:0,65,255:26,0 chr2 74689045 . G . PASS END=74689079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:19,0 chr2 74689080 . C . PASS END=74689082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 74689083 . C . PASS END=74689110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 74689111 . C . PASS END=74689116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 74689117 . A . PASS END=74689117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 74689118 . G . PASS END=74689133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:22,0 chr2 74689134 . G . PASS END=74689134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 74689135 . G . PASS END=74689138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74689139 . C . PASS END=74689145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 74689146 . G . PASS END=74689146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74689147 . T . PASS END=74689147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 74689148 . G . PASS END=74689148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74689149 . T . PASS END=74689153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74689154 . C . PASS END=74689160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 74689161 . G . PASS END=74689161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 74689162 . T . PASS END=74689169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 74689170 . C . PASS END=74689185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,706:0,57,255:19,0 chr2 74689186 . G . PASS END=74689191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 74689192 . G . PASS END=74689215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:19,0 chr2 74689216 . G . PASS END=74689216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74689217 . G . PASS END=74689218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74689219 . T . PASS END=74689249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,435:0,35,255:13,0 chr2 74689250 . G . PASS END=74689299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 74689300 . G . PASS END=74689302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74689303 . A . PASS END=74689303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr2 74689304 . A . PASS END=74689342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,435:0,33,255:13,0 chr2 74689343 . C . PASS END=74689344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 74689345 . T . PASS END=74689345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 74689346 . C . PASS END=74689362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr2 74689363 . G . PASS END=74689365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74689366 . A . PASS END=74689366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 74689367 . A . PASS END=74689437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,764:0,63,255:24,0 chr2 74689438 . T . PASS END=74689438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:24,0 chr2 74689439 . C . PASS END=74689483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,825:0,66,255:23,0 chr2 74689484 . G . PASS END=74689496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:21:0,51,765:0,63,255:19,0 chr2 74689497 . G . PASS END=74689497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74689498 . T . PASS END=74689500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74689501 . C . PASS END=74689502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74689503 . A . PASS END=74689520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,684:0,46,255:19,0 chr2 74689521 . G . PASS END=74689521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74689522 . G . PASS END=74689580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,560:0,47,255:19,0 chr2 74689581 . T . PASS END=74689581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 74689582 . G . PASS END=74689600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 74689601 . G . PASS END=74689601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 74689602 . C . PASS END=74689605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 74689606 . G . PASS END=74689606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74689607 . C . PASS END=74689631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,590:0,51,255:17,0 chr2 74689632 . G . PASS END=74689634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 74689635 . G . PASS END=74689635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74689636 . G . PASS END=74689636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 74689637 . C . PASS END=74689693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr2 74689694 . G . PASS END=74689701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74689702 . A . PASS END=74689702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 74689703 . A . PASS END=74689709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 74689710 . A . PASS END=74689710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 74689711 . A . PASS END=74689711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 74689712 . T . PASS END=74689725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,714:0,57,255:19,0 chr2 74689726 . C . PASS END=74689730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 74689731 . G . PASS END=74689732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 74689733 . G . PASS END=74689739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74689740 . C . PASS END=74689758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 74689759 . C . PASS END=74689778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:23,0 chr2 74689779 . C . PASS END=74689779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 74689780 . T . PASS END=74689806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,909:0,69,255:26,0 chr2 74689807 . T . PASS END=74689807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 74689808 . C . PASS END=74689832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,862:0,61,255:25,0 chr2 74689833 . C . PASS END=74689833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 74689834 . A . PASS END=74689839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 74689840 . T . PASS END=74689949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:19,0 chr2 74689950 . C . PASS END=74689953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr2 74689954 . A . PASS END=74689964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,621:0,51,255:19,0 chr2 74689965 . C . PASS END=74689967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 74689968 . C . PASS END=74689969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74689970 . G . PASS END=74689978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 74689979 . C . PASS END=74689979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 74689980 . A . PASS END=74690024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,860:0,69,255:26,0 chr2 74690025 . G . PASS END=74690025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 74690026 . T . PASS END=74690029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 74690030 . G . PASS END=74690031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74690032 . T . PASS END=74690034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 74690035 . G . PASS END=74690035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 74690036 . G . PASS END=74690040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74690041 . G . PASS END=74690043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:27,1 chr2 74690044 . C . PASS END=74690047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74690048 . G . PASS END=74690048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74690049 . G . PASS END=74690050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74690051 . G . PASS END=74690055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74690056 . T . PASS END=74690056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 74690057 . G . PASS END=74690071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 74690072 . T . PASS END=74690072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 74690073 . T . PASS END=74690076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 74690077 . C . PASS END=74690077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74690078 . G . PASS END=74690086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1008:0,71,255:26,0 chr2 74690087 . C . PASS END=74690089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74690090 . T . PASS END=74690092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 74690093 . C . PASS END=74690103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 74690104 . G . PASS END=74690104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 74690105 . G . PASS END=74690105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74690106 . C . PASS END=74690107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 74690108 . G . PASS END=74690110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 74690111 . C . PASS END=74690121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:27:0,76,1003:0,76,255:26,0 chr2 74690122 . G . PASS END=74690122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 74690123 . T . PASS END=74690139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr2 74690317 . C . PASS END=74690323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 74690324 . A . PASS END=74690324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:16,0 chr2 74690325 . C . PASS END=74690329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 74690330 . G . PASS END=74690332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74690333 . C . PASS END=74690337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 74690338 . T . PASS END=74690338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 74690339 . C . PASS END=74690343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:25,0 chr2 74690344 . G . PASS END=74690357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:31,0 chr2 74690358 . C . PASS END=74690358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 74690359 . A . PASS END=74690360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74690361 . A . PASS END=74690361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 74690362 . A . PASS END=74690399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1288:0,98,255:34,0 chr2 74690400 . A . PASS END=74690400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr2 74690401 . C . PASS END=74690409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1313:0,105,255:36,0 chr2 74690410 . T . PASS END=74690410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr2 74690411 . T . PASS END=74690487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1213:0,86,255:37,0 chr2 74690488 . A . PASS END=74690489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:26,0 chr2 74690490 . A . PASS END=74690503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1116:0,80,255:29,0 chr2 74690504 . T . PASS END=74690513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,71,255:25,0 chr2 74691617 . C . PASS END=74691617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 74691623 . C . PASS END=74691643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr2 74691644 . C . PASS END=74691644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 74691645 . C . PASS END=74691671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 74691672 . C . PASS END=74691672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 74691673 . C . PASS END=74691676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74691677 . C . PASS END=74691684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 74691685 . C . PASS END=74691693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:14:0,32,557:0,32,255:14,0 chr2 74691694 . T . PASS END=74691713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,582:0,41,255:19,0 chr2 74691714 . T . PASS END=74691716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74691717 . T . PASS END=74691717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:19,0 chr2 74691718 . G . PASS END=74691725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 74691726 . T . PASS END=74691731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:20:0,47,737:0,47,255:19,0 chr2 74691732 . C . PASS END=74691734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74691735 . A . PASS END=74691735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:18,0 chr2 74691736 . A . PASS END=74691755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,637:0,40,255:19,0 chr2 74691756 . T . PASS END=74691756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 74691757 . C . PASS END=74691774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,653:0,47,255:19,0 chr2 74691775 . C . PASS END=74691791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:24,0 chr2 74691792 . C . PASS END=74691792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 74691793 . A . PASS END=74691800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 74691801 . C . PASS END=74691801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 74691802 . T . PASS END=74691811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 74691812 . A . PASS END=74691824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,676:0,44,255:19,0 chr2 74691825 . G . PASS END=74691825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74691826 . T . PASS END=74691831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 74691832 . G . PASS END=74691832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74691833 . C . PASS END=74691843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 74691844 . T . PASS END=74691844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:16,0 chr2 74691845 . C . PASS END=74691849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 74692023 . C . PASS END=74692025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 74692026 . T . PASS END=74692026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 74692027 . G . PASS END=74692029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 74692030 . G . PASS END=74692030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74692031 . A . PASS END=74692034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr2 74692035 . G . PASS END=74692035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 74692036 . C . PASS END=74692037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:15,0 chr2 74692038 . T . PASS END=74692050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:17,0 chr2 74692051 . C . PASS END=74692051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 74692052 . T . PASS END=74692056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:18,0 chr2 74692057 . G . PASS END=74692057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 74692058 . C . PASS END=74692058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 74692059 . C . PASS END=74692059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 74692060 . G . PASS END=74692060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 74692061 . A . PASS END=74692070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 74692071 . G . PASS END=74692102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,637:0,54,255:19,0 chr2 74692103 . G . PASS END=74692103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 74692104 . C . PASS END=74692153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,627:0,41,255:19,0 chr2 74692154 . A . PASS END=74692176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr2 74692177 . G . PASS END=74692177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74692178 . T . PASS END=74692178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 74692179 . A . PASS END=74692190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 74692191 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.096;ReadPosRankSum=1.725;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,17,0:0.654,0.000:26:6,5,0:3,12,0:45:85,0,44,608,293,901:255,0,248:8,0:5.0000e+01,1.2633e-04,4.7195e+01,4.5000e+02,3.2788e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,3,9,8:3,6,9,8 chr2 74692192 . C . PASS END=74692201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 74692202 . G . PASS END=74692202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 74692203 . A . PASS END=74692203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr2 74692204 . C . PASS END=74692209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 74692210 . C . PASS END=74692210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 74692211 . A . PASS END=74692211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 74692212 . G . PASS END=74692212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:28,0 chr2 74692213 . G . PASS END=74692214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr2 74692215 . C . PASS END=74692217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 74692218 . A . PASS END=74692218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr2 74692219 . A . PASS END=74692223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 74692224 . G . PASS END=74692224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,998:0,57,255:26,0 chr2 74692225 . G . PASS END=74692228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74692229 . A . PASS END=74692237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74692238 . A . PASS END=74692238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,942:0,48,255:26,0 chr2 74692239 . G . PASS END=74692243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74692244 . A . PASS END=74692245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 74692246 . T . PASS END=74692250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74692251 . C . PASS END=74692255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 74692256 . G . PASS END=74692321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1033:0,80,255:31,0 chr2 74692322 . G . PASS END=74692324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 74692325 . C . PASS END=74692327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 74692328 . A . PASS END=74692330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,79,255:26,0 chr2 74692331 . C . PASS END=74692331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 74692332 . C . PASS END=74692340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:30:0,69,1035:0,80,255:26,0 chr2 74692341 . G . PASS END=74692341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,951:0,40,255:22,0 chr2 74692342 . C . PASS END=74692350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,886:0,64,255:23,0 chr2 74692351 . G . PASS END=74692351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 74692352 . C . PASS END=74692352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 74692353 . G . PASS END=74692353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 74692354 . C . PASS END=74692354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:22,0 chr2 74692355 . C . PASS END=74692355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 74692356 . G . PASS END=74692356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,753:0,25,255:21,0 chr2 74692357 . C . PASS END=74692358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 74692359 . G . PASS END=74692360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,836:0,53,255:22,0 chr2 74692361 . T . PASS END=74692372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 74692373 . A . PASS END=74692373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr2 74692374 . T . PASS END=74692374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74699246 . T . PASS END=74699246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74699247 . C . PASS END=74699268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr2 74699269 . G . PASS END=74699341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr2 74699342 . G . PASS END=74699343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:19,0 chr2 74699344 . G . PASS END=74699344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 74699345 . A . PASS END=74699345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:20,0 chr2 74699346 . T . PASS END=74699347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 74699348 . A . PASS END=74699348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 74699349 . G . PASS END=74699350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74699351 . G . PASS END=74699351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 74699352 . C . PASS END=74699354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74699355 . C . PASS END=74699379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:19,0 chr2 74699485 . C . PASS END=74699498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,961:0,75,255:26,0 chr2 74699499 . A . PASS END=74699557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1008:0,81,255:36,0 chr2 74699558 . G . PASS END=74699558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr2 74699559 . G . PASS END=74699597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:36,0 chr2 74699696 . C . PASS END=74699728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,100,1265:0,100,255:39,0 chr2 74699729 . A . PASS END=74699729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1302:0,70,255:33,0 chr2 74699730 . A . PASS END=74699745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1266:0,84,255:37,0 chr2 74699746 . T . PASS END=74699746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1095:0,75,255:32,0 chr2 74699747 . T . PASS END=74699757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:34,0 chr2 74699758 . C . PASS END=74699758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 74699759 . A . PASS END=74699766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:32,0 chr2 74699767 . C . PASS END=74699771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 74699772 . C . PASS END=74699773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 74699774 . A . PASS END=74699774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr2 74699775 . A . PASS END=74699779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,956:0,81,255:27,0 chr2 74699780 . G . PASS END=74699787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 74699922 . T . PASS END=74699923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74701673 . T . PASS END=74701677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 74701678 . A . PASS END=74701678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 74701679 . T . PASS END=74701690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr2 74701691 . T . PASS END=74701691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 74701692 . C . PASS END=74701694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 74701695 . A . PASS END=74701695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 74701696 . G . PASS END=74701700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 74701701 . G . PASS END=74701701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 74701702 . A . PASS END=74701706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74701707 . A . PASS END=74701707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:12,1 chr2 74701708 . A . PASS END=74701713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 74701714 . G . PASS END=74701747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:17,0 chr2 74701748 . A . PASS END=74701748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 74701749 . A . PASS END=74701772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr2 74701773 . A . PASS END=74701778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 74701779 . C . PASS END=74701780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74701781 . C . PASS END=74701794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr2 74701795 . C . PASS END=74701795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 74701796 . C . PASS END=74701800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74701801 . C . PASS END=74701803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 74701804 . C . PASS END=74701807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74701808 . T . PASS END=74701808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74701809 . G . PASS END=74701851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:25,0 chr2 74701852 . G . PASS END=74701878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:19,0 chr2 74701879 . T . PASS END=74701879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:16,0 chr2 74701880 . A . PASS END=74701908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:17,0 chr2 74701909 . T . PASS END=74701917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:14:0,31,520:0,31,255:13,0 chr2 74701918 . C . PASS END=74701921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74701922 . A . PASS END=74701922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 74701923 . C . PASS END=74701927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 74701928 . A . PASS END=74701929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74702043 . A . PASS END=74702059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr2 74702060 . C . PASS END=74702090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,853:0,63,255:25,0 chr2 74702091 . G . PASS END=74702178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,980:0,81,255:40,0 chr2 74702179 . C . PASS END=74702179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1496:0,71,255:39,0 chr2 74702180 . T . PASS END=74702222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1215:0,85,255:40,0 chr2 74702223 . G . PASS END=74702242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,884:0,61,255:26,0 chr2 74702352 . C . PASS END=74702375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:18,0 chr2 74702376 . A . PASS END=74702376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 74702377 . T . PASS END=74702378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74702379 . T . PASS END=74702379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 74702380 . G . PASS END=74702401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:16,0 chr2 74702402 . G . PASS END=74702427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 74702428 . G . PASS END=74702428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 74702429 . G . PASS END=74702449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 74702450 . C . PASS END=74702454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 74702455 . G . PASS END=74702455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 74702456 . C . PASS END=74702460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 74702461 . C . PASS END=74702461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 74702462 . T . PASS END=74702468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 74702469 . A . PASS END=74702469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 74702470 . C . PASS END=74702471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74702472 . G . PASS END=74702482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:13,0 chr2 74702483 . G . PASS END=74702483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr2 74702484 . G . PASS END=74702509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,352:0,33,255:13,0 chr2 74702510 . A . PASS END=74702510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,329:0,22,255:12,0 chr2 74702511 . C . PASS END=74702523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 74702524 . G . PASS END=74702529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74702739 . C . PASS END=74702853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:42:0,87,1305:0,101,255:40,0 chr2 74707896 . C . PASS END=74707902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:22,0 chr2 74707903 . T . PASS END=74707903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 74707904 . G . PASS END=74707934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,840:0,69,255:26,0 chr2 74707935 . C . PASS END=74707943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 74707944 . C . PASS END=74707945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74707946 . C . PASS END=74707965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 74707966 . T . PASS END=74707979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,939:0,64,255:26,0 chr2 74707980 . A . PASS END=74707989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74707990 . T . PASS END=74708009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,74,255:26,0 chr2 74708083 . A . PASS END=74708168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1460:0,87,255:40,0 chr2 74708169 . A . PASS END=74708169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1596:0,69,255:40,0 chr2 74708170 . G . PASS END=74708206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:86:44:0,86,1523:0,86,255:40,0 chr2 74708207 . G . PASS END=74708207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:16:44:0,16,1473:0,16,255:35,0 chr2 74708208 . C . PASS END=74708213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:41:0,84,1435:0,84,255:38,0 chr2 74708350 . C . PASS END=74708499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,104,1307:0,104,255:40,0 chr2 74708579 . C . PASS END=74708665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:34:0,92,1308:0,92,255:40,0 chr2 74708944 . C . PASS END=74708946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,488:0,39,255:13,0 chr2 74708947 . G . PASS END=74708951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 74708952 . A . PASS END=74708952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 74708953 . G . PASS END=74708966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 74708967 . T . PASS END=74708967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 74708968 . G . PASS END=74709019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,438:0,42,255:15,0 chr2 74709020 . C . PASS END=74709028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 74709029 . G . PASS END=74709032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr2 74709033 . G . PASS END=74709087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 74709088 . G . PASS END=74709092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74709093 . C . PASS END=74709103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74709104 . A . PASS END=74709136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr2 74709137 . T . PASS END=74709137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr2 74709138 . G . PASS END=74709158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr2 74709159 . T . PASS END=74709159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr2 74709160 . G . PASS END=74709184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:19,0 chr2 74709185 . C . PASS END=74709228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:24,0 chr2 74709229 . G . PASS END=74709229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 74709230 . G . PASS END=74709249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 74709250 . A . PASS END=74709250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:23,0 chr2 74709251 . G . PASS END=74709265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 74709266 . G . PASS END=74709266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 74709267 . G . PASS END=74709269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74709270 . G . PASS END=74709270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74709271 . T . PASS END=74709272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 74709273 . G . PASS END=74709273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74709274 . G . PASS END=74709285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 74709286 . C . PASS END=74709287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 74709288 . G . PASS END=74709300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 74709301 . G . PASS END=74709301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 74709302 . G . PASS END=74709302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 74709303 . C . PASS END=74709303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 74709304 . T . PASS END=74709323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:26,0 chr2 74709324 . G . PASS END=74709324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74709325 . T . PASS END=74709332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74709333 . G . PASS END=74709334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74709335 . G . PASS END=74709344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 74709345 . A . PASS END=74709345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74709346 . A . PASS END=74709346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,986:0,56,255:26,0 chr2 74709347 . G . PASS END=74709349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 74709350 . C . PASS END=74709390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr2 74709391 . C . PASS END=74709391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,1 chr2 74709392 . C . PASS END=74709392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:22,0 chr2 74709393 . C . PASS END=74709412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,892:0,63,255:23,0 chr2 74709413 . C . PASS END=74709425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,737:0,57,255:19,0 chr2 74709426 . G . PASS END=74709426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:16,0 chr2 74709427 . C . PASS END=74709444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,714:0,47,255:19,0 chr2 74709445 . C . PASS END=74709445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 74709446 . T . PASS END=74709447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74709448 . G . PASS END=74709449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74709450 . C . PASS END=74709554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,527:0,45,255:19,0 chr2 74709555 . A . PASS END=74709557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74709558 . G . PASS END=74709583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 74709584 . A . PASS END=74709585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 74709586 . G . PASS END=74709632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:17,0 chr2 74709633 . C . PASS END=74709633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 74709634 . A . PASS END=74709673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr2 74709674 . C . PASS END=74709700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:13,0 chr2 74709701 . C . PASS END=74709730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:8,0 chr2 74709731 . G . PASS END=74709748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,225:6,0 chr2 74709749 . C . PASS END=74709753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 74709754 . C . PASS END=74709766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr2 74709767 . G . PASS END=74709796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr2 74709797 . C . PASS END=74709829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr2 74709830 . G . PASS END=74709856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,645:0,51,255:18,0 chr2 74709857 . C . PASS END=74709857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr2 74709858 . G . PASS END=74709869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,601:0,54,255:18,0 chr2 74709870 . T . PASS END=74709870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 74709871 . C . PASS END=74709878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 74709879 . T . PASS END=74709879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 74709880 . C . PASS END=74709918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 74709919 . C . PASS END=74709950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 74709951 . G . PASS END=74709964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr2 74710223 . A . PASS END=74710262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,113,1678:0,113,255:40,0 chr2 74710449 . A . PASS END=74710474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1128:0,83,255:34,0 chr2 74710475 . C . PASS END=74710475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 74710476 . T . PASS END=74710477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74710478 . G . PASS END=74710478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 74710479 . A . PASS END=74710483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1074:0,90,255:30,0 chr2 74710484 . G . PASS END=74710484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 74710485 . C . PASS END=74710505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1101:0,80,255:30,0 chr2 74710506 . A . PASS END=74710507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr2 74710508 . G . PASS END=74710509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 74710510 . A . PASS END=74710525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,71,255:28,0 chr2 74710526 . T . PASS END=74710526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,833:0,47,255:22,0 chr2 74710527 . A . PASS END=74710537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 74710672 . A . PASS END=74710672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74710673 . T . PASS END=74710674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 74710675 . C . PASS END=74710683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74710684 . A . PASS END=74710685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,376:0,25,255:13,0 chr2 74710686 . C . PASS END=74710690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 74717152 . G . PASS END=74717152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 74717153 . A . PASS END=74717153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:29,0 chr2 74717154 . C . PASS END=74717154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 74717155 . A . PASS END=74717155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,959:0,76,255:28,0 chr2 74717156 . T . PASS END=74717156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74717157 . A . PASS END=74717157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:27,0 chr2 74717158 . G . PASS END=74717161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 74717162 . A . PASS END=74717162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 74717163 . T . PASS END=74717167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 74717168 . T . PASS END=74717168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 74717169 . T . PASS END=74717169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74717170 . C . PASS END=74717170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,972:0,60,255:27,0 chr2 74717171 . G . PASS END=74717176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:30,0 chr2 74717177 . T . PASS END=74717177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 74717178 . T . PASS END=74717182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1164:0,80,255:30,0 chr2 74717183 . A . PASS END=74717183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,988:0,63,255:27,0 chr2 74717184 . G . PASS END=74717184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 74717185 . A . PASS END=74717185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1054:0,66,255:29,0 chr2 74717186 . G . PASS END=74717190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr2 74717191 . C . PASS END=74717192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:36:0,61,1204:0,61,255:34,0 chr2 74717193 . C . PASS END=74717203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1296:0,92,255:36,0 chr2 74717204 . A . PASS END=74717204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:32,0 chr2 74717205 . C . PASS END=74717211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:38:0,82,1435:0,82,255:35,0 chr2 74717212 . C . PASS END=74717212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 74717213 . A . PASS END=74717215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1280:0,94,255:36,0 chr2 74717216 . T . PASS END=74717216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr2 74717217 . G . PASS END=74717221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1347:0,95,255:36,0 chr2 74717222 . G . PASS END=74717222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr2 74717223 . G . PASS END=74717239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1310:0,92,255:36,0 chr2 74717240 . A . PASS END=74717240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:50:37:0,50,1221:0,50,255:30,0 chr2 74717241 . G . PASS END=74717251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1117:0,80,255:32,0 chr2 74717252 . A . PASS END=74717252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:30,0 chr2 74717253 . T . PASS END=74717254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 74717371 . A . PASS END=74717371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:26,0 chr2 74717372 . T . PASS END=74717372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74717373 . T . PASS END=74717373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 74717374 . A . PASS END=74717374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74717375 . C . PASS END=74717375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 74717376 . C . PASS END=74717389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,925:0,64,255:26,0 chr2 74717390 . G . PASS END=74717390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 74717391 . G . PASS END=74717401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,878:0,64,255:26,0 chr2 74717402 . G . PASS END=74717451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1164:0,87,255:36,0 chr2 74717452 . C . PASS END=74717453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74717454 . T . PASS END=74717457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74717458 . G . PASS END=74717484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:26,0 chr2 74717485 . C . PASS END=74717488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 74717489 . C . PASS END=74717489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:19,0 chr2 74717490 . C . PASS END=74717494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,754:0,52,255:19,0 chr2 74717495 . G . PASS END=74717502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74717503 . C . PASS END=74717518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 74717519 . C . PASS END=74717519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 74717520 . T . PASS END=74717520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 74717521 . C . PASS END=74717524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 74717525 . C . PASS END=74717525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74717526 . T . PASS END=74717527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74717528 . T . PASS END=74717528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr2 74717529 . G . PASS END=74717529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 74717530 . C . PASS END=74717534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74717535 . T . PASS END=74717535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 74717536 . T . PASS END=74717537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 74717538 . C . PASS END=74717538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 74717539 . C . PASS END=74717539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 74717540 . C . PASS END=74717540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 74717541 . A . PASS END=74717541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74717542 . G . PASS END=74717543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:21:0,36,540:0,63,255:13,0 chr2 74717544 . G . PASS END=74717544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr2 74717545 . T . PASS END=74717552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:36:22:0,36,540:0,52,255:13,0 chr2 74717553 . A . PASS END=74717553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:11,0 chr2 74717554 . G . PASS END=74717554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:11,0 chr2 74717555 . C . PASS END=74717558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 74717559 . C . PASS END=74717560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 74717561 . T . PASS END=74717572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,466:0,39,255:13,0 chr2 74717573 . G . PASS END=74717573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 74717574 . C . PASS END=74717585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,449:0,36,255:12,0 chr2 74717586 . C . PASS END=74717586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 74717587 . T . PASS END=74717600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:9:0,20,360:0,20,255:9,0 chr2 74717783 . G . PASS END=74717783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,737:0,17,255:21,0 chr2 74717784 . A . PASS END=74717784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr2 74717785 . A . PASS END=74717795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,841:0,61,255:25,0 chr2 74717796 . T . PASS END=74717798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:30,0 chr2 74717799 . C . PASS END=74717799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,956:0,38,255:29,0 chr2 74717800 . T . PASS END=74717804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1109:0,93,255:32,0 chr2 74717805 . A . PASS END=74717805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,976:0,46,255:29,0 chr2 74717806 . G . PASS END=74717806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:33,0 chr2 74717807 . C . PASS END=74717807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,984:0,33,255:29,0 chr2 74717808 . T . PASS END=74717813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1182:0,83,255:33,0 chr2 74717814 . C . PASS END=74717814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1031:0,52,255:29,0 chr2 74717815 . T . PASS END=74717815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 74717816 . G . PASS END=74717816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:30,0 chr2 74717817 . A . PASS END=74717817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1086:0,38,255:29,0 chr2 74717818 . G . PASS END=74717819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr2 74717820 . A . PASS END=74717820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1101:0,74,255:32,0 chr2 74717821 . G . PASS END=74717824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1164:0,83,255:33,0 chr2 74717825 . C . PASS END=74717825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:31,0 chr2 74717826 . G . PASS END=74717826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 74717827 . C . PASS END=74717828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1021:0,68,255:31,0 chr2 74717829 . T . PASS END=74717829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 74717830 . G . PASS END=74717830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,898:0,19,255:27,0 chr2 74717831 . A . PASS END=74717835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr2 74717836 . G . PASS END=74717836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,987:0,52,255:27,0 chr2 74717837 . A . PASS END=74717841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1156:0,82,255:30,0 chr2 74717842 . A . PASS END=74717842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:25,0 chr2 74717843 . G . PASS END=74717843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1023:0,49,255:23,0 chr2 74717844 . A . PASS END=74717844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:24,0 chr2 74717845 . G . PASS END=74717845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,836:0,32,255:22,0 chr2 74717846 . A . PASS END=74717849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 74717850 . A . PASS END=74717866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 74718255 . C . PASS END=74718311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:38:0,87,1287:0,87,255:40,0 chr2 74718422 . G . PASS END=74718502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1139:0,80,255:40,0 chr2 74718608 . G . PASS END=74718612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:25,0 chr2 74718613 . A . PASS END=74718613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,959:0,40,255:25,0 chr2 74718614 . C . PASS END=74718615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr2 74718616 . G . PASS END=74718617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:28,0 chr2 74718618 . A . PASS END=74718618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:29,0 chr2 74718619 . T . PASS END=74718619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 74718620 . C . PASS END=74718620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 74718621 . T . PASS END=74718622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:31,0 chr2 74718623 . T . PASS END=74718623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1089:0,60,255:30,0 chr2 74718624 . C . PASS END=74718626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:31,0 chr2 74718627 . G . PASS END=74718627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr2 74718628 . C . PASS END=74718630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 74718631 . T . PASS END=74718631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr2 74718632 . T . PASS END=74718634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 74718635 . G . PASS END=74718635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:31,0 chr2 74718636 . T . PASS END=74718794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1067:0,83,255:40,0 chr2 74718795 . T . PASS END=74718799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,990:0,63,255:25,0 chr2 74719071 . G . PASS END=74719182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:51:0,120,1800:0,136,255:40,0 chr2 74719266 . A . PASS END=74719356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:34:0,93,1328:0,96,255:40,0 chr2 74719357 . G . PASS END=74719357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr2 74719358 . T . PASS END=74719360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1119:0,85,255:32,0 chr2 74719431 . G . PASS END=74719433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 74719434 . A . PASS END=74719434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:21,0 chr2 74719435 . T . PASS END=74719435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,674:0,22,255:20,0 chr2 74719436 . T . PASS END=74719445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 74719446 . T . PASS END=74719447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr2 74719448 . C . PASS END=74719457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 74719458 . T . PASS END=74719458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:18,0 chr2 74719459 . G . PASS END=74719464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 74719465 . T . PASS END=74719465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 74719466 . T . PASS END=74719469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,748:0,66,255:22,0 chr2 74719470 . T . PASS END=74719470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 74719471 . C . PASS END=74719480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 74719481 . G . PASS END=74719481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 74719482 . G . PASS END=74719492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 74719493 . A . PASS END=74719493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 74719494 . T . PASS END=74719501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 74719502 . T . PASS END=74719546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,631:0,40,255:19,0 chr2 74719547 . T . PASS END=74719547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 74719548 . G . PASS END=74719550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74719551 . C . PASS END=74719551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 74719552 . A . PASS END=74719569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 74719570 . C . PASS END=74719572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,535:0,31,255:13,0 chr2 74719773 . C . PASS END=74719796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1000:0,82,255:34,0 chr2 74719797 . T . PASS END=74719797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:32,0 chr2 74719798 . T . PASS END=74719843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1080:0,80,255:33,0 chr2 74719844 . G . PASS END=74719844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 74719845 . C . PASS END=74719845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74719846 . T . PASS END=74719846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74719847 . C . PASS END=74719856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 74719857 . C . PASS END=74719857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr2 74719858 . T . PASS END=74719858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 74719859 . T . PASS END=74719859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:26,0 chr2 74719860 . C . PASS END=74719860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74719861 . T . PASS END=74719871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,74,255:25,0 chr2 74719872 . C . PASS END=74719872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,876:0,12,255:18,0 chr2 74719873 . T . PASS END=74719873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,807:0,23,255:19,0 chr2 74719874 . G . PASS END=74719874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 74720049 . C . PASS END=74720050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 74720051 . G . PASS END=74720165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,512:0,41,255:19,0 chr2 74720166 . G . PASS END=74720173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 74720174 . G . PASS END=74720175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr2 74720176 . C . PASS END=74720182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74720183 . C . PASS END=74720185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 74720186 . G . PASS END=74720199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 74720200 . A . PASS END=74720200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 74720201 . T . PASS END=74720202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 74720203 . A . PASS END=74720203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,698:0,22,255:20,0 chr2 74720204 . T . PASS END=74720214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr2 74720215 . A . PASS END=74720215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr2 74720216 . C . PASS END=74720216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 74720217 . C . PASS END=74720220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 74720221 . G . PASS END=74720229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr2 74720230 . A . PASS END=74720230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74720231 . C . PASS END=74720231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr2 74720232 . C . PASS END=74720236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr2 74720237 . C . PASS END=74720269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr2 74720270 . T . PASS END=74720270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,582:0,18,255:18,0 chr2 74720271 . C . PASS END=74720287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:18,0 chr2 74720288 . T . PASS END=74720288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr2 74720289 . T . PASS END=74720292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74720293 . A . PASS END=74720293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr2 74720294 . G . PASS END=74720296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 74720297 . C . PASS END=74720297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:14,0 chr2 74720298 . T . PASS END=74720301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74720302 . A . PASS END=74720302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 74720303 . C . PASS END=74720305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74720306 . C . PASS END=74720309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 74720310 . G . PASS END=74720311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 74720312 . A . PASS END=74720312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:13,0 chr2 74720313 . C . PASS END=74720322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 74720323 . A . PASS END=74720323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 74720324 . G . PASS END=74720326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr2 74720327 . T . PASS END=74720327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr2 74720328 . C . PASS END=74720341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:12,0 chr2 74720342 . A . PASS END=74720342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 74720343 . T . PASS END=74720345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 74725054 . T . PASS END=74725067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,846:0,72,255:26,0 chr2 74725068 . G . PASS END=74725075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr2 74725076 . T . PASS END=74725076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 74725077 . C . PASS END=74725084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:29,0 chr2 74725085 . A . PASS END=74725085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 74725086 . G . PASS END=74725099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:31,0 chr2 74725100 . T . PASS END=74725100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 74725101 . C . PASS END=74725102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 74725103 . G . PASS END=74725103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 74725104 . G . PASS END=74725106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 74725107 . C . PASS END=74725140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1078:0,80,255:30,0 chr2 74725141 . G . PASS END=74725141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr2 74725142 . C . PASS END=74725143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 74725144 . T C, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,18,0:0,11,0:84:172,87,0,1108,87,1108:255,90,0:0,0:1.3428e+02,8.4276e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,13:0,0,13,16 chr2 74725145 . T . PASS END=74725181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,923:0,60,255:26,0 chr2 74725182 . A . PASS END=74725217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr2 74725218 . C . PASS END=74725218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 74725219 . C . PASS END=74725266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,892:0,66,255:24,0 chr2 74725267 . C . PASS END=74725267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr2 74725268 . T . PASS END=74725277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 74725278 . C . PASS END=74725278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 74725279 . C . PASS END=74725332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:24,0 chr2 74725333 . G . PASS END=74725333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 74725334 . A . PASS END=74725363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:24,0 chr2 74725364 . T . PASS END=74725364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 74725365 . G . PASS END=74725376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,923:0,75,255:25,0 chr2 74725377 . A . PASS END=74725377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 74725378 . C . PASS END=74725380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:24,0 chr2 74725381 . A . PASS END=74725381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 74725382 . G . PASS END=74725410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,671:0,63,255:22,0 chr2 74725411 . G . PASS END=74725417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:18,0 chr2 74725418 . G . PASS END=74725419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 74725420 . G . PASS END=74725424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr2 74725425 . G . PASS END=74725432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 74725433 . G . PASS END=74725433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 74725434 . G . PASS END=74725439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 74725440 . C . PASS END=74725440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 74725441 . C . PASS END=74725442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74725443 . G . PASS END=74725444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 74725445 . C . PASS END=74725445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74726460 . C . PASS END=74726466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74726467 . G . PASS END=74726467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 74726468 . G . PASS END=74726476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:15,0 chr2 74726477 . G . PASS END=74726477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 74726478 . C . PASS END=74726495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,484:0,45,255:15,0 chr2 74726496 . G . PASS END=74726496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr2 74726497 . G . PASS END=74726502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,550:0,45,255:15,0 chr2 74726503 . T . PASS END=74726503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 74726504 . T . PASS END=74726504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 74726505 . T . PASS END=74726505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 74726506 . A . PASS END=74726506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 74726507 . C . PASS END=74726507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 74726508 . T . PASS END=74726513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr2 74726514 . G . PASS END=74726514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:15,0 chr2 74726515 . C . PASS END=74726517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:17,0 chr2 74726518 . C . PASS END=74726519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 74726520 . C . PASS END=74726520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74726521 . C . PASS END=74726521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 74726522 . A . PASS END=74726538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,552:0,48,255:16,0 chr2 74726539 . C . PASS END=74726539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 74726540 . G . PASS END=74726540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 74726541 . T . PASS END=74726541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:15,0 chr2 74726542 . T . PASS END=74726548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 74726549 . G . PASS END=74726549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 74726550 . G . PASS END=74726550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74726551 . A . PASS END=74726551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 74726552 . C . PASS END=74726552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74726553 . C . PASS END=74726554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 74726555 . G . PASS END=74726557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:18,0 chr2 74726558 . T . PASS END=74726558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,560:0,23,255:17,0 chr2 74726559 . C . PASS END=74726571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,676:0,54,255:18,0 chr2 74726572 . C . PASS END=74726573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 74726574 . C . PASS END=74726575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74726576 . G . PASS END=74726576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 74726577 . A . PASS END=74726588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 74726589 . G . PASS END=74726598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 74726599 . C . PASS END=74726600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:9,0 chr2 74726601 . G . PASS END=74726622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,474:0,39,255:13,0 chr2 74726623 . T . PASS END=74726623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 74726624 . A . PASS END=74726634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 74726635 . G . PASS END=74726636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 74726637 . G . PASS END=74726650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:10,0 chr2 74726651 . C . PASS END=74726664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 74729794 . T . PASS END=74729797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 74729798 . G . PASS END=74729799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 74729800 . G . PASS END=74729801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 74729802 . C . LowGQ END=74729803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,274:3,0,255:10,0 chr2 74729804 . G . PASS END=74729804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 74729805 . C . LowGQ END=74729805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,335:3,0,255:11,0 chr2 74729806 . A . PASS END=74729806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 74729807 . G . LowGQ END=74729813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,341:0,0,255:13,0 chr2 74729814 . G . PASS END=74729815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74729816 . G . PASS END=74729816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74729817 . T . LowGQ END=74729818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,360:0,0,255:14,0 chr2 74729819 . G . PASS END=74729819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74729820 . T . LowGQ END=74729824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,368:0,0,255:14,0 chr2 74729825 . C . PASS END=74729825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74729826 . G . PASS END=74729826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 74729827 . C . PASS END=74729827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 74729828 . C . PASS END=74729828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:15,0 chr2 74729829 . C . PASS END=74729829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:14,0 chr2 74729830 . T . PASS END=74729830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74729831 . G . LowGQ END=74729831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,426:21,0,255:13,0 chr2 74729832 . G . PASS END=74729832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:15,0 chr2 74729833 . A . PASS END=74729833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 74729834 . C . PASS END=74729834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 74729835 . G . PASS END=74729835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 74729836 . C . LowGQ END=74729836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:14,0 chr2 74729837 . T . PASS END=74729839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:15,0 chr2 74729840 . T . PASS END=74729840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,460:0,9,255:15,0 chr2 74729841 . T . PASS END=74729841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74729842 . T . PASS END=74729842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:15,0 chr2 74729843 . G . PASS END=74729843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74729844 . C . LowGQ END=74729850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:0:16:0,0,372:0,0,255:15,0 chr2 74729851 . C . PASS END=74729851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 74729852 . T . PASS END=74729855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,596:0,48,255:16,0 chr2 74729856 . C . PASS END=74729856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 74729857 . G . PASS END=74729880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr2 74729881 . G . PASS END=74729919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:23,0 chr2 74729920 . G . PASS END=74729920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 74729921 . C . PASS END=74729936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 74729937 . T . PASS END=74729959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:17,0 chr2 74729960 . C . PASS END=74729986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:13,0 chr2 74732270 . C . PASS END=74732301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,925:0,64,255:26,0 chr2 74732302 . A . PASS END=74732307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr2 74732308 . A . PASS END=74732308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 74732309 . A . PASS END=74732314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr2 74732315 . T . PASS END=74732317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:25,0 chr2 74732466 . C . PASS END=74732546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:49:0,117,1755:0,117,255:40,0 chr2 74732679 . A . PASS END=74732687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,848:0,62,255:26,0 chr2 74732688 . G . PASS END=74732692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1026:0,87,255:30,0 chr2 74732693 . G . PASS END=74732693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 74732694 . C . PASS END=74732699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr2 74732700 . G . PASS END=74732700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 74732701 . C . PASS END=74732723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1279:0,89,255:32,0 chr2 74732724 . A . PASS END=74732724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr2 74732725 . T . PASS END=74732735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:35,0 chr2 74732736 . A . PASS END=74732736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1174:0,61,255:33,0 chr2 74732737 . G . PASS END=74732759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1189:0,91,255:36,0 chr2 74732760 . C . PASS END=74732760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 74732761 . T . PASS END=74732765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr2 74732864 . C . PASS END=74732897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:37:0,85,1374:0,85,255:40,0 chr2 74733079 . C . PASS END=74733148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1155:0,80,255:40,0 chr2 74733149 . T . PASS END=74733149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1413:0,74,255:40,0 chr2 74733150 . G . PASS END=74733184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:39:0,93,1395:0,101,255:40,0 chr2 74733308 . C . PASS END=74733379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1141:0,82,255:39,0 chr2 74733859 . T . PASS END=74733879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,629:0,43,255:19,0 chr2 74733880 . G . PASS END=74733887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,792:0,66,255:26,0 chr2 74733888 . A . PASS END=74733889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 74733890 . G . PASS END=74733891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 74733892 . T . PASS END=74733899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr2 74733900 . A . PASS END=74733900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr2 74733901 . T . PASS END=74733902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 74733903 . A . PASS END=74733903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr2 74733904 . C . PASS END=74733904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:28,0 chr2 74733905 . C . PASS END=74733907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:29,0 chr2 74733908 . G . PASS END=74733913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1125:0,82,255:31,0 chr2 74733914 . T . PASS END=74733914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:51:33:0,51,884:0,51,255:29,0 chr2 74733915 . T . PASS END=74733915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr2 74733916 . T . PASS END=74734004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1133:0,80,255:40,0 chr2 74734005 . T . PASS END=74734005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:33,0 chr2 74734006 . T . PASS END=74734011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1270:0,89,255:34,0 chr2 74734169 . A . PASS END=74734274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:54:0,120,1800:0,152,255:40,0 chr2 74734703 . C . PASS END=74734716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 74734717 . G . PASS END=74734719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 74734720 . C . PASS END=74734721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74734722 . A . PASS END=74734730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 74734731 . A . PASS END=74734733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74734734 . G . PASS END=74734766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1086:0,87,255:31,0 chr2 74734767 . G . PASS END=74734768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1100:0,74,255:26,0 chr2 74734769 . A . PASS END=74734769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74734770 . A . PASS END=74734770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr2 74734771 . T . PASS END=74734795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,801:0,69,255:26,0 chr2 74741351 . A . PASS END=74741358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1063:0,84,255:28,0 chr2 74741359 . G . PASS END=74741361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74741934 . A . LowGQ END=74741940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:8:0,0,233:7,0,247:7,0 chr2 74741941 . C . PASS END=74741941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 74741942 . G . LowGQ END=74741942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr2 74741943 . G . PASS END=74741944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 74741945 . G . LowGQ END=74741946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr2 74741947 . T . PASS END=74741947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 74741948 . G . LowGQ END=74741948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr2 74741949 . C . PASS END=74741950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 74741951 . G . LowGQ END=74741952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:8,0 chr2 74741953 . G . PASS END=74741953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 74741954 . T . LowGQ END=74741959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:9:0,0,258:9,0,255:9,0 chr2 74741960 . C . PASS END=74741960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 74741961 . A . LowGQ END=74741962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:9,0 chr2 74741963 . C . PASS END=74741982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr2 74741983 . T . PASS END=74741983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 74741984 . C . PASS END=74741991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 74741992 . G . PASS END=74742020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 74742021 . A . PASS END=74742021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,472:0,6,255:13,0 chr2 74742022 . C . PASS END=74742022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74742023 . C . PASS END=74742023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74742024 . C . PASS END=74742024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 74742025 . C . PASS END=74742028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74742029 . G . PASS END=74742030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74742031 . G . PASS END=74742033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 74742034 . G . PASS END=74742042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 74742043 . T . PASS END=74742043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 74742044 . G . PASS END=74742049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 74742050 . C . PASS END=74742050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:17,0 chr2 74742051 . G . PASS END=74742096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,553:0,40,255:19,0 chr2 74742097 . A . PASS END=74742097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 74742098 . C . PASS END=74742107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr2 74742108 . G . PASS END=74742111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74742112 . A . PASS END=74742113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74742114 . G . PASS END=74742123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 74742124 . G . PASS END=74742124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 74742125 . C . PASS END=74742137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr2 74742138 . C . PASS END=74742138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 74742139 . T . PASS END=74742142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 74742143 . C . PASS END=74742143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 74742144 . G . PASS END=74742146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74742147 . A . PASS END=74742153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74742154 . G . PASS END=74742154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74742155 . A . PASS END=74742155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 74742156 . G . PASS END=74742156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74742157 . T . PASS END=74742169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,645:0,44,255:18,0 chr2 74742170 . C . PASS END=74742170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 74742171 . G . PASS END=74742184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,668:0,54,255:18,0 chr2 74742185 . T . PASS END=74742185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 74742186 . G . PASS END=74742197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:17,0 chr2 74742198 . C . PASS END=74742198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 74742199 . T . PASS END=74742206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 74742207 . C . PASS END=74742207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 74742208 . C . PASS END=74742216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 74742217 . C . PASS END=74742238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr2 74742239 . T . PASS END=74742239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 74742240 . G . PASS END=74742240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74742241 . G . PASS END=74742241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:9,0 chr2 74742242 . G . PASS END=74742245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 74742246 . T . PASS END=74742258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:7:0,18,270:0,21,255:6,0 chr2 74742259 . G . PASS END=74742261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 74742262 . C . PASS END=74742262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 74742263 . C . PASS END=74742263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 74742264 . G . PASS END=74742266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,197:6,0 chr2 74742267 . G . PASS END=74742279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr2 74742280 . T . PASS END=74742296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,217:6,0 chr2 74742297 . G . PASS END=74742312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr2 74742313 . T . PASS END=74742333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,172:6,0 chr2 74742760 . C . PASS END=74742789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,327:0,30,255:13,0 chr2 74742790 . G . PASS END=74742834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr2 74742835 . A . PASS END=74742835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 74742836 . G . PASS END=74742856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 74742857 . C . PASS END=74742857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 74742858 . T . PASS END=74742860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 74742861 . C . PASS END=74742861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 74742862 . A . PASS END=74742862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 74742863 . G . PASS END=74742881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:11,0 chr2 74742882 . C . PASS END=74742882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 74742883 . G . PASS END=74742884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 74742885 . T . PASS END=74742885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr2 74742886 . T . PASS END=74742896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr2 74742897 . A . PASS END=74742897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr2 74742898 . A . PASS END=74742898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 74742899 . G . PASS END=74742899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 74742900 . T . PASS END=74742900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 74742901 . A . PASS END=74742901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 74742902 . C . LowGQ END=74742902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:9,0 chr2 74742903 . C . PASS END=74742903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 74742904 . T . PASS END=74742904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 74742905 . G . PASS END=74742910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr2 74742911 . T . PASS END=74742924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr2 74742925 . C . PASS END=74742927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74742928 . T . PASS END=74742928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 74742929 . G . PASS END=74742933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 74742934 . A . PASS END=74742936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr2 74742937 . C . PASS END=74742937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr2 74742938 . C . PASS END=74742965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,250:9,0 chr2 74742966 . A . PASS END=74742966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,231:0,7,231:7,0 chr2 74742967 . C . PASS END=74742987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 74742988 . C . PASS END=74742988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 74742989 . C . PASS END=74742997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 74743100 . G . PASS END=74743110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 74743111 . C . PASS END=74743111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 74743112 . G . PASS END=74743116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 74743117 . A . PASS END=74743117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr2 74743118 . G . PASS END=74743129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,149:5,0 chr2 74743130 . G . PASS END=74743130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr2 74743131 . C . PASS END=74743140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:6,0 chr2 74743141 . C . PASS END=74743143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 74743144 . G . PASS END=74743146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 74743147 . G . PASS END=74743148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 74743149 . C . PASS END=74743158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,255:6,0 chr2 74743159 . A . PASS END=74743160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:7,0 chr2 74743161 . C . PASS END=74743171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr2 74743172 . C . PASS END=74743209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 74743210 . A . PASS END=74743212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 74743213 . C . PASS END=74743215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 74743216 . T . PASS END=74743216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 74743217 . C . PASS END=74743219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 74743220 . C . PASS END=74743220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr2 74743221 . C . PASS END=74743250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 74743251 . A . PASS END=74743251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 74743252 . A . PASS END=74743253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 74743254 . C . PASS END=74743270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 74743271 . G . PASS END=74743271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 74743272 . G . PASS END=74743320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:9,0 chr2 74743321 . C . PASS END=74743325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 74743326 . G . PASS END=74743340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 74743341 . A . PASS END=74743341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 74743342 . G . PASS END=74743346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 74743347 . G . PASS END=74743348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74743349 . G . PASS END=74743349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 74743350 . C . PASS END=74743351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74743352 . C . PASS END=74743376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,225:6,0 chr2 74743377 . T . LowGQ END=74743382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:6:0,0,133:9,0,154:9,0 chr2 74743383 . C . PASS END=74743383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74743384 . A . LowGQ END=74743386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:8,0 chr2 74743387 . G . PASS END=74743387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 74743388 . T . LowGQ END=74743393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:10:0,0,272:6,0,255:9,0 chr2 74743394 . G . PASS END=74743417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 74743418 . C . PASS END=74743425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr2 74743426 . G . PASS END=74743426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 74743427 . A . PASS END=74743450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,203:0,21,203:9,0 chr2 74743451 . C . PASS END=74743452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 74743453 . A . PASS END=74743460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74743461 . G . PASS END=74743461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 74743462 . C . PASS END=74743527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,441:0,33,255:13,0 chr2 74743528 . T . PASS END=74743530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 74743531 . C . PASS END=74743531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74743532 . T . PASS END=74743532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 74743533 . G . PASS END=74743540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74743541 . G . PASS END=74743541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 74743542 . C . PASS END=74743558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 74745573 . T . PASS END=74745725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:36:0,90,1350:0,104,255:40,0 chr2 74745726 . C . PASS END=74745729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:26,0 chr2 74746167 . A . PASS END=74746179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,933:0,62,255:26,0 chr2 74746180 . T . PASS END=74746180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,854:0,39,255:25,0 chr2 74746181 . C . PASS END=74746181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 74746182 . T . PASS END=74746182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 74746183 . C . PASS END=74746191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 74746192 . T . PASS END=74746192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 74746193 . G . PASS END=74746194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74746195 . A . PASS END=74746196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 74746197 . A . PASS END=74746202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr2 74746203 . T . PASS END=74746203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 74746204 . T . PASS END=74746292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1011:0,81,255:36,0 chr2 74746293 . A . PASS END=74746293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:33,0 chr2 74746294 . G . PASS END=74746322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1305:0,92,255:34,0 chr2 74746323 . A . PASS END=74746323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr2 74746324 . G . PASS END=74746343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 74746344 . G . PASS END=74746357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,932:0,70,255:26,0 chr2 74746683 . C . PASS END=74746687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 74746688 . G . PASS END=74746688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 74746689 . A . PASS END=74746689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr2 74746690 . A . PASS END=74746691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 74746692 . G . PASS END=74746692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 74746693 . T . PASS END=74746696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:29,0 chr2 74746697 . C . PASS END=74746699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 74746700 . A . PASS END=74746700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 74746701 . C . PASS END=74746701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 74746702 . A . PASS END=74746869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:31:0,80,1133:0,80,255:40,0 chr2 74746870 . C . PASS END=74746870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1386:0,68,255:29,0 chr2 74746871 . C . PASS END=74746873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1395:0,114,255:33,0 chr2 74747042 . T . PASS END=74747042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:30:37:0,30,973:0,30,255:33,0 chr2 74747043 . T . PASS END=74747161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:95:37:0,95,1341:0,95,255:40,0 chr2 74749707 . C . PASS END=74749707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 74749708 . T . PASS END=74749709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74749710 . T . PASS END=74749711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74749712 . A . PASS END=74749712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 74749713 . G . PASS END=74749898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1125:0,87,255:40,0 chr2 74749983 . C . PASS END=74749983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 74749984 . A . PASS END=74749984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1318:0,59,255:35,0 chr2 74749985 . G . PASS END=74750172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:38:0,102,1411:0,102,255:40,0 chr2 74750246 . C . PASS END=74750393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,117,1659:0,119,255:40,0 chr2 74750437 . A . PASS END=74750625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:35:0,88,1174:0,88,255:40,0 chr2 74750626 . T . PASS END=74750626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1233:0,61,255:26,0 chr2 74750627 . A . PASS END=74750628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 74750629 . C . PASS END=74750629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1249:0,78,255:27,0 chr2 74750630 . T . PASS END=74750641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1131:0,80,255:29,0 chr2 74750642 . G . PASS END=74750643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr2 74750644 . T . PASS END=74750645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 74750646 . C . PASS END=74750646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 74750647 . A . PASS END=74750647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74750648 . C . PASS END=74750648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 74750649 . A . PASS END=74750649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74750650 . G . PASS END=74750650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1061:0,38,255:25,0 chr2 74750651 . C . PASS END=74750651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 74750652 . A . PASS END=74750652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74750653 . C . PASS END=74750653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:25,0 chr2 74750654 . A . PASS END=74750660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,946:0,67,255:26,0 chr2 74750661 . T . PASS END=74750661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 74750662 . T . PASS END=74750662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:25,0 chr2 74750663 . T . PASS END=74750663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:24,0 chr2 74750664 . C . PASS END=74750664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74750874 . C . PASS END=74750963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:41:0,95,1334:0,95,255:40,0 chr2 74751050 . C . PASS END=74751111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,89,255:40,0 chr2 74751112 . C . PASS END=74751115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr2 74751116 . T . PASS END=74751118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 74751119 . G . PASS END=74751121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr2 74751122 . G . PASS END=74751122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74751123 . G . PASS END=74751126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 74751127 . C . PASS END=74751213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1074:0,83,255:38,0 chr2 74751214 . T . PASS END=74751214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:34,0 chr2 74751215 . G . PASS END=74751317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:35:0,83,1213:0,83,255:38,0 chr2 74751318 . T . PASS END=74751318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:33,0 chr2 74751319 . G . PASS END=74751362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1194:0,86,255:35,0 chr2 74751363 . A . PASS END=74751377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,67,255:26,0 chr2 74751378 . G . PASS END=74751380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 74751381 . C . PASS END=74751381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:18,0 chr2 74751382 . C . PASS END=74751382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74751383 . A . PASS END=74751406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr2 74751407 . C . PASS END=74751414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:13,0 chr2 74751415 . G . PASS END=74751419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:9,0 chr2 74751420 . C . PASS END=74751422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 74751423 . T . PASS END=74751434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:11:0,20,360:0,20,255:9,0 chr2 74752136 . C . PASS END=74752144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:25,0 chr2 74752145 . G . PASS END=74752316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,986:0,81,255:40,0 chr2 74752317 . A . PASS END=74752323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr2 74752324 . A . PASS END=74752329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1041:0,84,255:29,0 chr2 74752620 . C . PASS END=74752631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr2 74752632 . G . PASS END=74752632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 74752633 . C . PASS END=74752642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:22,0 chr2 74752643 . G . PASS END=74752643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 74752644 . C . PASS END=74752657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,65,255:26,0 chr2 74752658 . G . PASS END=74752663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 74752664 . C . PASS END=74752677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1039:0,71,255:26,0 chr2 74752678 . C . PASS END=74752678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 74752679 . T . PASS END=74752679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr2 74752680 . C . PASS END=74752696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1066:0,93,255:31,0 chr2 74752697 . A . PASS END=74752697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 74752698 . G . PASS END=74752708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1099:0,90,255:30,0 chr2 74752709 . C . PASS END=74752744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr2 74752745 . G . PASS END=74752749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74752750 . T . PASS END=74752762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 74752763 . A . PASS END=74752793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1050:0,84,255:32,0 chr2 74752794 . C . PASS END=74752795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 74752796 . G . PASS END=74752797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 74752798 . T . PASS END=74752856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,945:0,62,255:26,0 chr2 74753927 . T . PASS END=74753963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:36:0,93,1352:0,98,255:39,0 chr2 74754068 . C . PASS END=74754068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 74754069 . T . PASS END=74754069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr2 74754070 . T . PASS END=74754072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 74754073 . T . PASS END=74754074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:30,0 chr2 74754075 . C . PASS END=74754186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:31:0,87,1074:0,88,255:40,0 chr2 74754204 . T . PASS END=74754248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,151,255:40,0 chr2 74754375 . C . PASS END=74754490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:36:0,93,1303:0,94,255:40,0 chr2 74754598 . C . PASS END=74754717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:80:37:0,80,1410:0,80,255:40,0 chr2 74754863 . C . PASS END=74754965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,120,1800:0,122,255:40,0 chr2 74755067 . C . PASS END=74755133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,117,1755:0,123,255:40,0 chr2 74755375 . C . PASS END=74755376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr2 74755377 . T . PASS END=74755377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 74755378 . A . PASS END=74755380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 74755381 . T . PASS END=74755381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 74755382 . G . PASS END=74755386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 74755387 . A . PASS END=74755387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 74755388 . C . PASS END=74755398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:24,0 chr2 74755399 . A . PASS END=74755399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 74755400 . C . PASS END=74755401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 74755402 . A . PASS END=74755402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 74755403 . A . PASS END=74755416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,841:0,72,255:25,0 chr2 74755417 . A . PASS END=74755417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 74755418 . G . PASS END=74755428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,862:0,75,255:25,0 chr2 74755429 . C . PASS END=74755429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 74755430 . A . PASS END=74755439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 74755440 . T . PASS END=74755440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 74755441 . G . PASS END=74755448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 74755544 . C . PASS END=74755546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74755547 . A . PASS END=74755549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 74755550 . G . PASS END=74755550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74755551 . A . PASS END=74755563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:19:0,57,729:0,57,255:19,0 chr2 74755564 . G . PASS END=74755579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr2 74755580 . A . PASS END=74755580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:20,0 chr2 74755581 . G . PASS END=74755590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74755591 . C . PASS END=74755591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 74755592 . A . PASS END=74755598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr2 74755599 . A . PASS END=74755604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:19,0 chr2 74755605 . A . PASS END=74755610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 74755611 . C . PASS END=74755611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 74755612 . A . PASS END=74755614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74755615 . A . PASS END=74755616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,735:0,47,255:19,0 chr2 74755878 . C . PASS END=74755885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr2 74755886 . C . PASS END=74755889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 74755890 . A . PASS END=74755890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr2 74755891 . G . PASS END=74755899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr2 74755900 . G . PASS END=74755994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,936:0,81,255:35,0 chr2 74755995 . C . PASS END=74756024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr2 74756025 . G . PASS END=74756033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,747:0,52,255:19,0 chr2 74756034 . A . PASS END=74756034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:18,0 chr2 74756035 . C . PASS END=74756046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,615:0,43,255:18,0 chr2 74756047 . G . PASS END=74756062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:14:0,30,540:0,30,255:13,0 chr2 74756259 . G . PASS END=74756260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:18:0,47,690:0,47,255:20,0 chr2 74756261 . T . PASS END=74756268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,787:0,63,255:23,0 chr2 74756269 . G . PASS END=74756269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 74756270 . T . PASS END=74756286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,780:0,69,255:23,0 chr2 74756287 . A . PASS END=74756287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 74756288 . T . PASS END=74756293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 74756294 . G . PASS END=74756294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:21,0 chr2 74756295 . G . PASS END=74756303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:26,0 chr2 74756304 . T . PASS END=74756313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,1008:0,80,255:31,0 chr2 74756314 . T . PASS END=74756314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:31,0 chr2 74756315 . T . PASS END=74756504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1142:0,80,255:39,0 chr2 74756505 . C . PASS END=74756505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:32,0 chr2 74756506 . T . PASS END=74756514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1227:0,99,255:33,0 chr2 74756515 . G . PASS END=74756515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:29,0 chr2 74756516 . C . PASS END=74756565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1202:0,86,255:34,0 chr2 74756566 . G . PASS END=74756569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1124:0,77,255:26,0 chr2 74756570 . A . PASS END=74756578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 74756579 . G . PASS END=74756626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,945:0,60,255:26,0 chr2 74756707 . C . PASS END=74756746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1185:0,80,255:36,0 chr2 74756747 . G . PASS END=74756747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr2 74756748 . A . PASS END=74756828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,83,255:38,0 chr2 74756829 . A . PASS END=74756830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:32:0,78,1170:0,83,255:26,0 chr2 74756831 . G . PASS END=74756832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 74756833 . C . PASS END=74756848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:68:28:0,68,1008:0,68,255:26,0 chr2 74756898 . G . PASS END=74756898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74756918 . G . PASS END=74756918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:22,0 chr2 74756998 . C . PASS END=74756998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 74757048 . G . PASS END=74757048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74757134 . A . PASS END=74757154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr2 74757155 . C . PASS END=74757155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 74757156 . G . PASS END=74757158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 74757159 . G . PASS END=74757159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74757160 . T . PASS END=74757163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,790:0,50,255:19,0 chr2 74757164 . G . PASS END=74757187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,878:0,66,255:25,0 chr2 74757188 . G . PASS END=74757188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 74757189 . C . PASS END=74757249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:21:0,61,784:0,61,255:26,0 chr2 74757250 . G . PASS END=74757251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 74757252 . C . PASS END=74757262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 74757263 . T . PASS END=74757263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 74757264 . C . PASS END=74757271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 74757272 . C . PASS END=74757280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 74757281 . G . PASS END=74757291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 74757292 . G . PASS END=74757293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74757294 . C . PASS END=74757297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 74757298 . C . PASS END=74757341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:18:0,50,698:0,50,255:19,0 chr2 74757342 . C . PASS END=74757342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr2 74757343 . A . PASS END=74757343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74757344 . T . PASS END=74757345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74757346 . C . PASS END=74757346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 74757347 . C . PASS END=74757368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr2 74757369 . C . PASS END=74757376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr2 74757377 . C . PASS END=74757382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr2 74757383 . A . PASS END=74757383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 74757384 . C . PASS END=74757390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 74757391 . G . PASS END=74757392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 74757393 . C . PASS END=74757393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr2 74757394 . C . PASS END=74757401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 74757402 . C . PASS END=74757402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74757403 . C . PASS END=74757403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 74757404 . A . PASS END=74757405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 74757406 . G . PASS END=74757418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,720:0,44,255:19,0 chr2 74757419 . T . PASS END=74757422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 74757423 . A . PASS END=74757423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74757424 . G . PASS END=74757439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,1 chr2 74757440 . T . PASS END=74757440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 74757441 . C . PASS END=74757442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74757443 . C . PASS END=74757443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 74757444 . G . PASS END=74757454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 74757455 . G . PASS END=74757455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 74757456 . C . PASS END=74757475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,801:0,66,255:24,0 chr2 74757476 . G . PASS END=74757476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 74757477 . G . PASS END=74757478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 74757479 . G . PASS END=74757485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,56,255:23,0 chr2 74757486 . T . PASS END=74757493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:21,0 chr2 74757494 . T . PASS END=74757495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 74757496 . G . PASS END=74757496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74757497 . T . PASS END=74757497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,642:0,35,255:20,0 chr2 74757498 . G . PASS END=74757499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74757500 . G . PASS END=74757500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 74757501 . G . PASS END=74757502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:21,0 chr2 74757503 . G . PASS END=74757508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:21:0,52,784:0,52,255:19,0 chr2 74757509 . C . PASS END=74757514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 74757515 . C . PASS END=74757515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 74757516 . C . PASS END=74757523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 74757524 . G . PASS END=74757524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:19,0 chr2 74757525 . T . PASS END=74757531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 74757532 . C . PASS END=74757536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 74757537 . T . PASS END=74757556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 74757557 . T . PASS END=74757557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 74757558 . C . PASS END=74757561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 74757562 . C . PASS END=74757562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 74757563 . C . PASS END=74757572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 74757573 . A . PASS END=74757573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:21,0 chr2 74757574 . C . PASS END=74757575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 74757576 . A . PASS END=74757576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 74757577 . C . PASS END=74757584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 74757585 . C . PASS END=74757586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,775:0,50,255:20,0 chr2 74757587 . G . PASS END=74757598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 74757599 . A . PASS END=74757599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr2 74757600 . A . PASS END=74757606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 74757607 . A . PASS END=74757610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 74757611 . G . PASS END=74757613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 74757614 . G . PASS END=74757615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 74757616 . G . PASS END=74757624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 74757625 . C . PASS END=74757639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,713:0,52,255:19,0 chr2 74757734 . T . PASS END=74757735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 74757744 . G . PASS END=74757744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 74757745 . C . PASS END=74757745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 74757746 . A . PASS END=74757759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,962:0,67,255:24,0 chr2 74757760 . C . PASS END=74757760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 74757761 . G . PASS END=74757781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,923:0,72,255:26,0 chr2 74757782 . G . PASS END=74757948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1134:0,80,255:40,0 chr2 74758038 . G . PASS END=74758038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 74758039 . A . PASS END=74758039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 74758040 . G . PASS END=74758040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,996:0,59,255:28,0 chr2 74758041 . C . PASS END=74758044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1049:0,86,255:30,0 chr2 74758045 . T . PASS END=74758045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr2 74758046 . C . PASS END=74758065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1219:0,91,255:35,0 chr2 74758066 . G . PASS END=74758066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:34,0 chr2 74758067 . C . PASS END=74758173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1123:0,81,255:40,0 chr2 74758174 . G . PASS END=74758174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:33,0 chr2 74758175 . A . PASS END=74758204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1205:0,88,255:35,0 chr2 74758205 . A . PASS END=74758205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:31,0 chr2 74758206 . T . PASS END=74758208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:32,0 chr2 74758209 . A . PASS END=74758209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:32,0 chr2 74758210 . T . PASS END=74758212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr2 74758213 . A . PASS END=74758214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:63:34:0,63,1143:0,63,255:30,0 chr2 74758215 . A . PASS END=74758222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1148:0,83,255:31,0 chr2 74758223 . A . PASS END=74758233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:69:31:0,69,1035:0,85,255:26,0 chr2 74758466 . T . PASS END=74758498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,124,255:40,0 chr2 74758694 . G . PASS END=74758829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,99,1598:0,99,255:40,0 chr2 74758970 . C . PASS END=74758970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 74758983 . A . PASS END=74758992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1419:0,93,255:40,0 chr2 74758993 . C . PASS END=74758993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:40,0 chr2 74758994 . G . PASS END=74759052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:43:0,91,1526:0,91,255:40,0 chr2 74759746 . C . PASS END=74759839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,101,1416:0,101,255:40,0 chr2 74759840 . C . PASS END=74759840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1406:0,68,255:40,0 chr2 74759841 . G . PASS END=74759841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 74759947 . G . PASS END=74760112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:87:38:0,87,1305:0,95,255:40,0 chr2 74760361 . G . PASS END=74760361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 74760377 . C . PASS END=74760377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:29,0 chr2 74760379 . C . PASS END=74760379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74760403 . G . PASS END=74760403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 74760625 . T . PASS END=74760625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 74760649 . G . PASS END=74760649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr2 74760733 . T . PASS END=74760806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,160,255:40,0 chr2 74761001 . T . PASS END=74761120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,191,255:40,0 chr2 74761227 . C . PASS END=74761363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:33:0,85,1202:0,85,255:40,0 chr2 74761443 . C . PASS END=74761455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:30,0 chr2 74761456 . A . PASS END=74761457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 74761458 . T . PASS END=74761485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1020:0,88,255:36,0 chr2 74761486 . G . PASS END=74761486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr2 74761487 . C . PASS END=74761492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:33,0 chr2 74761493 . G . PASS END=74761493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:59:36:0,59,1190:0,59,255:28,0 chr2 74761494 . C . PASS END=74761498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:34:0,87,1305:0,89,255:31,0 chr2 74761499 . T . PASS END=74761499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:28,0 chr2 74761500 . T . PASS END=74761503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,85,255:29,0 chr2 74761504 . G . PASS END=74761504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1119:0,69,255:27,0 chr2 74761505 . C . PASS END=74761507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:29,0 chr2 74761508 . T . PASS END=74761508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,928:0,52,255:27,0 chr2 74761509 . T . PASS END=74761509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:28,0 chr2 74761510 . T . PASS END=74761511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1210:0,86,255:29,0 chr2 74761512 . G . PASS END=74761513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:28,0 chr2 74761514 . G . PASS END=74761514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1022:0,46,255:26,0 chr2 74761515 . T . PASS END=74761515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74761516 . G . PASS END=74761516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:24,0 chr2 74761517 . A . PASS END=74761517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,943:0,54,255:23,0 chr2 74761518 . G . PASS END=74761546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,876:0,61,255:26,0 chr2 74761547 . C . PASS END=74761547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 74761548 . T . PASS END=74761558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 74761658 . C . PASS END=74761659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74761660 . A . PASS END=74761660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74761661 . T . PASS END=74761661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr2 74761662 . G . PASS END=74761664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr2 74761665 . A . PASS END=74761665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 74761666 . C . PASS END=74761675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:18,0 chr2 74761676 . A . PASS END=74761676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74761677 . C . PASS END=74761690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 74761691 . C . PASS END=74761724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,784:0,63,255:26,0 chr2 74761725 . T . PASS END=74761726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 74761727 . T . PASS END=74761730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74761731 . T . PASS END=74761731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74761732 . C . PASS END=74761732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 74761733 . T . PASS END=74761750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:27,0 chr2 74761751 . A . PASS END=74761762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr2 74761763 . C . PASS END=74761772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:29,0 chr2 74761773 . A . PASS END=74761773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:28,0 chr2 74761774 . G . PASS END=74761775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:29,0 chr2 74761776 . T . PASS END=74761783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr2 74761784 . C . PASS END=74761786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 74761787 . G . PASS END=74761787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 74761788 . C . PASS END=74761788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74761789 . T . PASS END=74761792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 74761793 . C . PASS END=74761800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr2 74761801 . G . PASS END=74761802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 74761803 . A . PASS END=74761809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74761810 . T . PASS END=74761816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr2 74761817 . G . PASS END=74761826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,65,255:19,0 chr2 74761827 . A . PASS END=74761833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 74761834 . C . PASS END=74761842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 74761843 . G . PASS END=74761852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74761853 . T . PASS END=74761862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 74761863 . C . PASS END=74761863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr2 74761864 . C . PASS END=74761877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr2 74761878 . A . PASS END=74761901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,437:0,39,255:13,0 chr2 74762419 . T . PASS END=74762419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74762420 . C . PASS END=74762439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr2 74762440 . C . PASS END=74762459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:31,0 chr2 74762460 . C . PASS END=74762460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 74762461 . T . PASS END=74762521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1194:0,93,255:34,0 chr2 74762522 . G . PASS END=74762526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:25,0 chr2 74762527 . G . PASS END=74762530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 74762531 . T . PASS END=74762553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr2 74762554 . T . PASS END=74762554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 74762555 . A . PASS END=74762562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 74762563 . A . PASS END=74762581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,720:0,44,255:19,0 chr2 74762715 . C . PASS END=74762733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 74762734 . T . PASS END=74762748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr2 74762749 . T . PASS END=74762749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 74762750 . G . PASS END=74762760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr2 74762761 . A . LowGQ END=74762761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:4,0 chr2 74762762 . C . PASS END=74762773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:5,0 chr2 74762774 . G . LowGQ END=74762774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 74762775 . G . PASS END=74762786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 74762787 . A . LowGQ END=74762787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr2 74762788 . T . PASS END=74762788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 74762789 . C . PASS END=74762792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 74762793 . A . PASS END=74762793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 74762794 . C . PASS END=74762797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr2 74762798 . T . PASS END=74762808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 74762809 . C . PASS END=74762813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 74762814 . G . PASS END=74762814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74762815 . G . PASS END=74762815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 74762816 . G . PASS END=74762825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr2 74762826 . C . PASS END=74762826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 74762827 . C . PASS END=74762827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 74762828 . C . PASS END=74762829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr2 74762830 . A . LowGQ END=74762830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr2 74762831 . T . PASS END=74762831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr2 74762832 . T . PASS END=74762835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 74762836 . A . LowGQ END=74762836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:8,0 chr2 74762837 . C . PASS END=74762841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr2 74762842 . A . PASS END=74762842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 74762843 . C . PASS END=74762853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 74762854 . T . PASS END=74762854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 74762855 . G . PASS END=74762859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 74762860 . C . PASS END=74762860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 74762861 . T . PASS END=74762863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74762864 . G . PASS END=74762871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74762872 . C . PASS END=74762875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 74762876 . G . PASS END=74762878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74762879 . G . PASS END=74762879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 74762880 . G . PASS END=74762881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 74762882 . T . PASS END=74762882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 74763123 . C . PASS END=74763138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,732:0,63,255:22,0 chr2 74763139 . G . PASS END=74763182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 74763183 . A . PASS END=74763185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74763186 . A . PASS END=74763202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr2 74763203 . T . PASS END=74763257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:26,0 chr2 74763258 . C . PASS END=74763277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:17,0 chr2 74763418 . C . PASS END=74763418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74763419 . C . PASS END=74763484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1060:0,83,255:33,0 chr2 74763485 . G . PASS END=74763485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr2 74763486 . C . PASS END=74763500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1119:0,93,255:31,0 chr2 74763501 . T . PASS END=74763505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:61:32:0,61,1080:0,61,255:26,0 chr2 74763506 . C . PASS END=74763508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:27,0 chr2 74763509 . G . PASS END=74763514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:30:0,69,1066:0,69,255:27,0 chr2 74763515 . A . PASS END=74763525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1186:0,83,255:29,0 chr2 74763526 . C . PASS END=74763526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 74763527 . C . PASS END=74763536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 74763537 . G . PASS END=74763581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,931:0,75,255:26,0 chr2 74763582 . T . PASS END=74763582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:21,0 chr2 74763583 . T . PASS END=74763584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 74763585 . A . PASS END=74763598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,776:0,55,255:19,0 chr2 74763836 . C . PASS END=74763838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74763839 . C . PASS END=74763867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 74763868 . T . PASS END=74763868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 74763869 . C . PASS END=74763922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 74763923 . G . LowGQ END=74763924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:0:28:0,0,877:0,0,255:25,3 chr2 74763925 . C . PASS END=74763925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr2 74763926 . C . PASS END=74763934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 74763935 . G . PASS END=74763935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74763936 . C . PASS END=74763946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 74763947 . G . PASS END=74763949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 74763950 . A . PASS END=74763950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr2 74763951 . T . PASS END=74763955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr2 74763956 . A . PASS END=74763992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,976:0,65,255:26,0 chr2 74763993 . T . PASS END=74763993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 74763994 . C . PASS END=74763998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 74763999 . C . PASS END=74763999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 74764000 . C . PASS END=74764011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:24,0 chr2 74764012 . C . PASS END=74764036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 74764037 . C . PASS END=74764037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 74764038 . T . PASS END=74764038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 74764039 . G . PASS END=74764041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 74764042 . G . PASS END=74764046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,652:0,54,255:18,0 chr2 74764047 . G . PASS END=74764047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 74764048 . C . PASS END=74764051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 74764052 . C . PASS END=74764052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 74764053 . A . PASS END=74764054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 74764055 . C . PASS END=74764055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 74776496 . C . PASS END=74776496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 74776497 . T . PASS END=74776497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 74776498 . G . PASS END=74776501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 74776502 . A . PASS END=74776502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr2 74776503 . A . PASS END=74776504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 74776505 . G . PASS END=74776505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 74776506 . C . PASS END=74776512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,344:0,33,255:11,0 chr2 74776513 . G . PASS END=74776514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 74776515 . C . PASS END=74776515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 74776516 . C . PASS END=74776516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 74776517 . C . PASS END=74776518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr2 74776519 . C . PASS END=74776519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 74776520 . T . PASS END=74776520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 74776521 . T . LowGQ END=74776521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:10,0 chr2 74776522 . T . PASS END=74776522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,380:0,33,255:11,0 chr2 74776523 . T . PASS END=74776524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 74776525 . G . PASS END=74776528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 74776529 . G . PASS END=74776529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 74776530 . G . PASS END=74776540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 74776541 . A . PASS END=74776541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 74776542 . T . PASS END=74776544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 74776545 . C . PASS END=74776545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 74776546 . G . PASS END=74776548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 74776549 . G . PASS END=74776549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 74776550 . A . PASS END=74776552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,374:0,36,255:12,0 chr2 74776553 . A . PASS END=74776553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,380:0,5,255:10,0 chr2 74776554 . C . PASS END=74776560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr2 74776561 . G . PASS END=74776565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 74776566 . G . PASS END=74776570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74776571 . C . PASS END=74776571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74776572 . T . PASS END=74776572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 74776573 . C . PASS END=74776576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74776577 . C . PASS END=74776580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 74776581 . T . PASS END=74776581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:11,0 chr2 74776582 . G . PASS END=74776586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 74776587 . A . PASS END=74776587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 74776588 . C . PASS END=74776589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 74776590 . C . PASS END=74776597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 74776598 . C . PASS END=74776600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74776601 . C . PASS END=74776601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 74776602 . C . PASS END=74776605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 74776606 . A . PASS END=74776606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 74776607 . G . PASS END=74776620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:13,0 chr2 74776621 . C . PASS END=74776634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 74776635 . T . PASS END=74776656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:12,0 chr2 74776657 . C . PASS END=74776681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 74776682 . A . PASS END=74776682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 74776683 . C . PASS END=74776700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 74776701 . G . PASS END=74776701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 74776702 . A . PASS END=74776706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 74776707 . C . PASS END=74776710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74777312 . C . PASS END=74777318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 74777319 . A . PASS END=74777333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:16,0 chr2 74777334 . A . PASS END=74777334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 74777335 . A . PASS END=74777354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr2 74777355 . T . PASS END=74777362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 74777363 . G . PASS END=74777363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 74777364 . A . PASS END=74777385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:26,0 chr2 74777386 . T . PASS END=74777388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74777389 . A . PASS END=74777393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74777394 . C . PASS END=74777397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74777398 . T . PASS END=74777426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 74777427 . A . PASS END=74777427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 74777428 . C . PASS END=74777443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 74777444 . A . PASS END=74777444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 74777445 . C . PASS END=74777456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:20,0 chr2 74777457 . T . PASS END=74777475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 74779449 . C . PASS END=74779463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:18,0 chr2 74779464 . A . PASS END=74779464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 74779465 . T . PASS END=74779483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:19,0 chr2 74779484 . C . PASS END=74779488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 74779489 . G . PASS END=74779490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74779491 . C . PASS END=74779492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74779493 . T . PASS END=74779493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74779494 . C . PASS END=74779498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 74779499 . A . PASS END=74779500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,745:0,49,255:19,0 chr2 74779501 . G . PASS END=74779509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74779510 . C . PASS END=74779515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74779516 . G . PASS END=74779519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 74779520 . A . PASS END=74779520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 74779521 . T . PASS END=74779554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr2 74779555 . G . PASS END=74779558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 74779559 . G . PASS END=74779559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74779560 . T . PASS END=74779563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 74779564 . C . PASS END=74779564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 74779565 . C . PASS END=74779565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:21,0 chr2 74779566 . A . PASS END=74779567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 74779568 . T . PASS END=74779568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr2 74779569 . C . PASS END=74779573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 74779574 . G . PASS END=74779578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 74779579 . C . PASS END=74779579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74779580 . T . PASS END=74779594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,574:0,44,255:15,0 chr2 74779595 . C . PASS END=74779598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 74779599 . C . PASS END=74779655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,607:0,48,255:19,0 chr2 74779656 . T . PASS END=74779656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 74779657 . C . PASS END=74779658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74779659 . T . PASS END=74779659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,505:0,34,255:15,0 chr2 74779660 . C . PASS END=74779674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:18,0 chr2 74779675 . A . PASS END=74779675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 74779676 . G . PASS END=74779697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,601:0,51,255:18,0 chr2 74779698 . A . PASS END=74779711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr2 74779712 . C . PASS END=74779713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 74779714 . C . PASS END=74779719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 74779720 . C . PASS END=74779739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr2 74779740 . G . PASS END=74779740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 74779741 . C . PASS END=74779755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:7,0 chr2 74779756 . T . PASS END=74779761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr2 74781882 . A . PASS END=74781892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1143:0,80,255:39,0 chr2 74781893 . A . PASS END=74781893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1339:0,62,255:36,0 chr2 74781894 . G . PASS END=74781941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:43:0,96,1308:0,96,255:40,0 chr2 74781958 . A . PASS END=74781986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,113,1800:0,113,255:40,0 chr2 74782281 . A . PASS END=74782281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 74782282 . G . PASS END=74782282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr2 74782283 . G . PASS END=74782283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 74782284 . T . PASS END=74782284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 74782285 . G . PASS END=74782285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 74782286 . G . PASS END=74782286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 74782287 . A . PASS END=74782291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 74782292 . G . PASS END=74782292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 74782293 . A . PASS END=74782294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74782295 . C . PASS END=74782295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 74782296 . T . PASS END=74782317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,861:0,66,255:23,0 chr2 74782318 . G . PASS END=74782318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 74782319 . T . PASS END=74782323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74782324 . A . PASS END=74782329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr2 74782330 . T . PASS END=74782330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:18,0 chr2 74782331 . A . PASS END=74782337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,643:0,40,255:19,0 chr2 74782338 . C . PASS END=74782338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 74782339 . T . PASS END=74782344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,670:0,41,255:19,0 chr2 74782345 . T . PASS END=74782345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:19,0 chr2 74782346 . C . PASS END=74782346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 74782347 . T . PASS END=74782349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74782350 . G . PASS END=74782351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74782352 . C . PASS END=74782353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 74782354 . A . PASS END=74782356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 74782357 . A . PASS END=74782360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr2 74782361 . G . PASS END=74782401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,734:0,63,255:23,0 chr2 74782402 . A . PASS END=74782402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 74782403 . C . PASS END=74782442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,878:0,62,255:25,0 chr2 74782443 . C . PASS END=74782443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 74782444 . C . PASS END=74782485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,770:0,63,255:24,0 chr2 74782486 . T . PASS END=74782487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74782488 . C . PASS END=74782503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 74782504 . A . PASS END=74782553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:19,0 chr2 74782554 . C . PASS END=74782554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 74782555 . A . PASS END=74782558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 74782559 . G . PASS END=74782559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 74782560 . C . PASS END=74782567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 74782568 . A . PASS END=74782580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,495:0,32,255:13,0 chr2 74782702 . A . PASS END=74782779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:32:0,80,1133:0,80,255:40,0 chr2 74782780 . A . PASS END=74782791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:29:0,69,1035:0,87,255:26,0 chr2 74782792 . G . PASS END=74782792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:23,0 chr2 74782793 . A . PASS END=74782795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,970:0,67,255:25,0 chr2 74783021 . G . PASS END=74783022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 74783023 . T . PASS END=74783036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:19,0 chr2 74783037 . A . PASS END=74783040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 74783041 . G . PASS END=74783041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 74783042 . T . PASS END=74783047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr2 74783048 . G . PASS END=74783048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr2 74783049 . G . PASS END=74783056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr2 74783057 . C . PASS END=74783176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,950:0,81,255:40,0 chr2 74783177 . C . PASS END=74783184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 74783185 . C . PASS END=74783185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr2 74783186 . G . PASS END=74783196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr2 74783197 . C . PASS END=74783198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr2 74783199 . G . PASS END=74783203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 74783204 . A . PASS END=74783205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 74783435 . G . PASS END=74783435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74783436 . T . PASS END=74783436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 74783437 . C . PASS END=74783441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 74783442 . T . PASS END=74783442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:20,0 chr2 74783443 . C . PASS END=74783445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 74783446 . T . PASS END=74783446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 74783447 . T . PASS END=74783451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:22,0 chr2 74783452 . G . PASS END=74783452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr2 74783453 . G . PASS END=74783491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,748:0,66,255:23,0 chr2 74783492 . T . PASS END=74783492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 74783493 . T . PASS END=74783498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 74783499 . C . PASS END=74783516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:17,0 chr2 74783517 . T . PASS END=74783518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 74783519 . T . PASS END=74783548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr2 74783549 . C . PASS END=74783551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 74783552 . A . PASS END=74783555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 74783556 . C . PASS END=74783562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 74783563 . A . PASS END=74783566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 74783567 . G . PASS END=74783567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74783568 . C . PASS END=74783568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 74783569 . C . PASS END=74783572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 74783573 . C . PASS END=74783573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr2 74783574 . A . PASS END=74783579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 74783580 . A . PASS END=74783580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 74783581 . C . PASS END=74783636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,750:0,63,255:26,0 chr2 74783637 . C . PASS END=74783645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr2 74783646 . G . PASS END=74783646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 74783647 . C . PASS END=74783665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,928:0,81,255:29,0 chr2 74783666 . A . PASS END=74783669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr2 74783670 . C . PASS END=74783670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 74783671 . C . PASS END=74783671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr2 74783672 . C . PASS END=74783673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 74783674 . A . PASS END=74783675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr2 74783676 . C . PASS END=74783676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 74783677 . C . PASS END=74783677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:29,0 chr2 74783678 . C . PASS END=74783719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1178:0,83,255:32,0 chr2 74783720 . C . PASS END=74783722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74783723 . T . PASS END=74783751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1177:0,80,255:30,0 chr2 74783752 . G . PASS END=74783793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:26,0 chr2 74783794 . G . PASS END=74783795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 74783796 . A . PASS END=74783801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 74783802 . T . PASS END=74783802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:23,0 chr2 74783803 . C . PASS END=74783833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr2 74783834 . C . PASS END=74783853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr2 74783854 . G . PASS END=74783854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 74783855 . A . PASS END=74783861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 74783862 . C . PASS END=74783876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 74783877 . T . PASS END=74783885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr2 74783886 . A . PASS END=74783887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74783888 . C . PASS END=74783890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74783891 . G . PASS END=74783893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 74783894 . G . PASS END=74783899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 74783900 . G . PASS END=74783900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 74783901 . C . PASS END=74783945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:32,0 chr2 74783946 . A . PASS END=74783946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:27,0 chr2 74783947 . G . PASS END=74783952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:30,0 chr2 74783953 . A . PASS END=74783953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:29,0 chr2 74783954 . T . PASS END=74783963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 74783964 . A . PASS END=74783964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 74783965 . A . PASS END=74783967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74783968 . T . PASS END=74783981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:26,0 chr2 74783982 . A . PASS END=74783983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,801:0,44,255:22,0 chr2 74783984 . G . PASS END=74784002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr2 74784003 . A . PASS END=74784007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr2 74784008 . G . PASS END=74784013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 74784014 . G . PASS END=74784014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:22,0 chr2 74784015 . A . PASS END=74784039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,947:0,64,255:26,0 chr2 74784040 . G . PASS END=74784069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,883:0,81,255:29,0 chr2 74784070 . C . PASS END=74784077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr2 74784078 . C . PASS END=74784080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74784081 . C . PASS END=74784081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74784082 . C . PASS END=74784082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74784083 . T . PASS END=74784098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 74784099 . C . PASS END=74784111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1037:0,84,255:28,0 chr2 74784112 . T . PASS END=74784112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 74784113 . G . PASS END=74784113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 74784114 . G . PASS END=74784115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 74784116 . A . PASS END=74784123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 74784124 . C . PASS END=74784124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 74784125 . C . PASS END=74784130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 74784131 . T . PASS END=74784133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1041:0,73,255:26,0 chr2 74784134 . G . PASS END=74784154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1319:0,95,255:35,0 chr2 74784155 . A . PASS END=74784155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1230:0,78,255:31,0 chr2 74784156 . A . PASS END=74784188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1147:0,80,255:32,0 chr2 74784189 . T . PASS END=74784201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,878:0,61,255:26,0 chr2 74784202 . G . PASS END=74784206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74784207 . A . PASS END=74784207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 74784208 . C . PASS END=74784219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:28,0 chr2 74784220 . C . PASS END=74784227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 74784228 . A . PASS END=74784228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:22,0 chr2 74784229 . G . PASS END=74784241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,68,255:22,0 chr2 74785843 . T . PASS END=74785847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:24,0 chr2 74785848 . G . PASS END=74785958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,992:0,81,255:40,0 chr2 74785959 . G . PASS END=74785959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:27,0 chr2 74785960 . G . PASS END=74785975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:31,0 chr2 74785976 . G . PASS END=74785976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 74785977 . C . PASS END=74785980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 74785981 . G . PASS END=74785997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr2 74785998 . C . PASS END=74786002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr2 74786825 . C . PASS END=74786836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,209,255:40,0 chr2 74787278 . C . PASS END=74787280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 74787281 . T . PASS END=74787281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr2 74787282 . C . PASS END=74787292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr2 74787293 . G . PASS END=74787293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr2 74787294 . C . PASS END=74787294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 74787295 . T . PASS END=74787295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr2 74787296 . C . PASS END=74787296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 74787297 . T . PASS END=74787300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr2 74787301 . A . PASS END=74787301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74787302 . G . PASS END=74787369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1135:0,80,255:35,0 chr2 74787370 . C . PASS END=74787370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:33,0 chr2 74787371 . A . PASS END=74787402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,89,255:35,0 chr2 74787403 . G . PASS END=74787413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:26,0 chr2 74787414 . A . PASS END=74787418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,65,255:19,0 chr2 74789344 . C . PASS END=74789344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 74789345 . T . PASS END=74789345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 74789346 . C . PASS END=74789348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 74789349 . C . PASS END=74789350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr2 74789351 . T . PASS END=74789361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,695:0,66,255:22,0 chr2 74789362 . A . PASS END=74789362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 74789363 . T . PASS END=74789365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr2 74789366 . T . PASS END=74789366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 74789367 . C . PASS END=74789367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 74789368 . A . PASS END=74789368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr2 74789369 . T . PASS END=74789369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 74789370 . G . PASS END=74789370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 74789371 . T . PASS END=74789371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 74789372 . G . PASS END=74789374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 74789375 . T . PASS END=74789375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 74789376 . C . PASS END=74789385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 74789386 . C . PASS END=74789386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 74789387 . A . PASS END=74789534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1149:0,80,255:40,0 chr2 74789535 . G . PASS END=74789545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,80,255:26,0 chr2 74789546 . C . PASS END=74789550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 74802541 . T . PASS END=74802691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:33:0,83,1178:0,83,255:40,0 chr2 74802692 . C . PASS END=74802706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,68,255:26,0 chr2 74803583 . T . PASS END=74803586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr2 74803587 . T . PASS END=74803587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 74803588 . C . PASS END=74803590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr2 74803591 . T . PASS END=74803591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr2 74803592 . T . PASS END=74803745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:29:0,80,1072:0,80,255:40,0 chr2 74804012 . T . PASS END=74804048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:69:0,120,1800:0,173,255:40,0 chr2 74808801 . T . PASS END=74808974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:31:0,90,1125:0,93,255:40,0 chr2 74834182 . C . PASS END=74834182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74834183 . A . PASS END=74834183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 74834184 . T . PASS END=74834350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1078:0,82,255:40,1 chr2 74842091 . C . PASS END=74842099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 74842100 . G . PASS END=74842100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 74842101 . G . PASS END=74842128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,729:0,60,255:26,0 chr2 74842129 . C . PASS END=74842144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,970:0,81,255:30,0 chr2 74842145 . T . PASS END=74842146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr2 74842147 . T . PASS END=74842200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1133:0,85,255:32,0 chr2 74842201 . T . PASS END=74842201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr2 74842202 . G . PASS END=74842206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1157:0,82,255:31,0 chr2 74842207 . A . PASS END=74842207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:29,0 chr2 74842208 . C . PASS END=74842211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 74842212 . T . PASS END=74842212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1099:0,66,255:30,0 chr2 74842213 . C . PASS END=74842227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1127:0,82,255:33,0 chr2 74842228 . G . PASS END=74842238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,90,255:25,0 chr2 74842239 . A . PASS END=74842262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr2 74842263 . T . PASS END=74842263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr2 74842264 . T . PASS END=74842274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr2 74842275 . T . PASS END=74842275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 74842276 . G . PASS END=74842276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74867163 . C . PASS END=74867451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:29:0,84,1067:0,87,255:40,0 chr2 74867452 . C . PASS END=74867454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 74874402 . C . PASS END=74874463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:41:0,91,1535:0,91,255:40,0 chr2 74881504 . A . PASS END=74881508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr2 74881509 . G . PASS END=74881509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 74881510 . G . PASS END=74881519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:17,0 chr2 74881520 . C . PASS END=74881520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 74881521 . G . PASS END=74881533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr2 74881534 . G . PASS END=74881557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,792:0,63,255:26,0 chr2 74881558 . C . PASS END=74881558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 74881559 . C . PASS END=74881559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74881560 . C . PASS END=74881561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74881562 . T . PASS END=74881564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74881565 . C . PASS END=74881565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74881566 . G . PASS END=74881566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 74881567 . C . PASS END=74881577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74881578 . G . PASS END=74881592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,984:0,68,255:23,0 chr2 74881593 . C . PASS END=74881593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 74881594 . C . PASS END=74881597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 74881598 . T . PASS END=74881598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 74881599 . A . PASS END=74881601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 74881602 . C . PASS END=74881602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 74881603 . G . PASS END=74881609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 74881610 . T . PASS END=74881610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 74881611 . C . PASS END=74881617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 74881618 . T . PASS END=74881619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 74881620 . G . PASS END=74881620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74881621 . G . PASS END=74881648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 74882394 . T . PASS END=74882455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,138,255:40,0 chr2 74883661 . A . PASS END=74883661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 74883662 . G . PASS END=74883665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 74883666 . G . PASS END=74883666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 74883667 . A . PASS END=74883680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1125:0,90,255:36,0 chr2 74883681 . C . PASS END=74883681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr2 74883682 . G . PASS END=74883810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,102,255:40,0 chr2 74883811 . G . PASS END=74883812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 74884692 . A . PASS END=74884751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,134,255:40,0 chr2 74884980 . G . PASS END=74885078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:46:0,87,1305:0,122,255:40,0 chr2 74889859 . G . PASS END=74889861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 74889862 . G . PASS END=74889864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:26,0 chr2 74889865 . T . PASS END=74889877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:29,0 chr2 74889878 . A . PASS END=74889878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 74889879 . G . PASS END=74889881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr2 74889882 . T . PASS END=74889882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr2 74889883 . G . PASS END=74889914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1172:0,83,255:32,0 chr2 74889915 . T . PASS END=74889915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:30,0 chr2 74889916 . T . PASS END=74889922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:30,0 chr2 74889923 . C . PASS END=74889924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 74889925 . G . PASS END=74889925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74889926 . C . PASS END=74889937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:27:0,74,1108:0,74,255:26,0 chr2 74889938 . C . PASS END=74889938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 74889939 . A . PASS END=74889939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 74889940 . G . PASS END=74889940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,914:0,26,255:24,0 chr2 74889941 . C . PASS END=74889952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr2 74900584 . G . PASS END=74900697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,84,255:40,0 chr2 74900698 . T . PASS END=74900698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 74900699 . G . PASS END=74900701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74900702 . C . PASS END=74900703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 74900804 . C . PASS END=74900955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:35:0,90,1350:0,105,255:40,0 chr2 74901625 . G . PASS END=74901636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,864:0,72,255:25,0 chr2 74901637 . G . PASS END=74901645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 74901646 . A . PASS END=74901646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 74901647 . C . PASS END=74901678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1024:0,81,255:33,0 chr2 74901679 . G . PASS END=74901681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:32,0 chr2 74901682 . G . PASS END=74901733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1350:0,98,255:36,0 chr2 74901734 . A . PASS END=74901734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:30,0 chr2 74901735 . T . PASS END=74901739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1257:0,89,255:33,0 chr2 74901740 . C . PASS END=74901740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr2 74901741 . T . PASS END=74901768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,89,255:33,0 chr2 74901769 . A . PASS END=74901773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,1083:0,60,255:26,0 chr2 74901774 . C . PASS END=74901774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 74901775 . A . PASS END=74901775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 74901776 . T . PASS END=74901780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 74901781 . T . PASS END=74901781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 74901782 . A . PASS END=74901786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 74901787 . A . PASS END=74901803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,969:0,65,255:26,0 chr2 74902015 . G . PASS END=74902034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1305:0,90,255:36,0 chr2 74902035 . C . PASS END=74902035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:35,0 chr2 74902036 . T . PASS END=74902149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1158:0,96,255:40,0 chr2 74902150 . C . PASS END=74902151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr2 74902152 . G . PASS END=74902154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 74902155 . C . PASS END=74902162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:28:0,75,1125:0,84,255:26,0 chr2 74902289 . T . PASS END=74902293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1061:0,71,255:26,0 chr2 74902294 . C . PASS END=74902300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:31,0 chr2 74902301 . A . PASS END=74902301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 74902302 . A . PASS END=74902307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:32,0 chr2 74902308 . A . PASS END=74902308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:32,0 chr2 74902309 . G . PASS END=74902410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:33:0,89,1211:0,89,255:40,0 chr2 74902411 . C . PASS END=74902411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1549:0,77,255:38,0 chr2 74902412 . C . PASS END=74902454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1238:0,81,255:38,0 chr2 74902455 . C . PASS END=74902455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:35,0 chr2 74902456 . C . PASS END=74902480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1083:0,81,255:37,0 chr2 74902481 . A . PASS END=74902481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:24:35:0,24,962:0,24,255:27,0 chr2 74902482 . A . PASS END=74902482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 74902483 . A . PASS END=74902484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,88,255:26,0 chr2 74902485 . A . PASS END=74902485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1089:0,49,255:22,0 chr2 74902486 . G . PASS END=74902487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:33:0,69,1035:0,99,255:23,0 chr2 74902488 . A . PASS END=74902488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1094:0,44,255:21,0 chr2 74902489 . T . PASS END=74902495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:28:0,69,1035:0,80,255:23,0 chr2 74902496 . C . PASS END=74902497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,826:0,42,255:22,0 chr2 74902498 . C . PASS END=74902498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 74902499 . T . PASS END=74902500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,917:0,42,255:23,0 chr2 74902501 . C . PASS END=74902507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,67,255:23,0 chr2 74902508 . A . PASS END=74902508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,774:0,28,255:19,0 chr2 74902509 . C . PASS END=74902510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:22,0 chr2 74902511 . G . PASS END=74902511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr2 74902652 . A . PASS END=74902761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:36:0,105,1252:0,107,255:40,0 chr2 74902876 . A . PASS END=74903011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1111:0,83,255:40,0 chr2 74903012 . T . PASS END=74903032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 74903033 . G . PASS END=74903033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:23,0 chr2 74903034 . A . PASS END=74903036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 74906403 . G . PASS END=74906461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,125,255:40,0 chr2 74906726 . A . PASS END=74906726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 74906727 . A . PASS END=74906727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 74906728 . C . PASS END=74906728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 74906729 . G . PASS END=74906734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 74906735 . T . PASS END=74906735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 74906736 . A . PASS END=74906739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,886:0,69,255:24,0 chr2 74906740 . T . PASS END=74906740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:23,0 chr2 74906741 . T . PASS END=74906752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,816:0,72,255:24,0 chr2 74906753 . T . PASS END=74906753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 74906754 . G . PASS END=74906761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr2 74906762 . C . PASS END=74906763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 74906764 . G . PASS END=74906764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 74906765 . C . PASS END=74906765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 74906766 . G . PASS END=74906766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 74906767 . C . PASS END=74906773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:29,0 chr2 74906774 . T . PASS END=74906774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 74906775 . C . PASS END=74906796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:31,0 chr2 74906797 . G . PASS END=74906797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr2 74906798 . C . PASS END=74906806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 74906807 . C . PASS END=74906807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 74906808 . C . PASS END=74906809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 74906810 . G . PASS END=74906820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,1080:0,63,255:25,0 chr2 74906821 . C . PASS END=74906823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,855:0,42,255:20,0 chr2 74906824 . C . PASS END=74906852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 74906853 . G . PASS END=74906859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 74906860 . G . PASS END=74906861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 74906862 . A . PASS END=74906882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr2 74906883 . A . PASS END=74906889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr2 74906890 . A . PASS END=74906892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74906893 . G . PASS END=74906918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 74906919 . G . PASS END=74906925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 74906926 . G . PASS END=74906926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 74906927 . C . PASS END=74906969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:19,0 chr2 74906970 . G . PASS END=74906978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 74906979 . T . PASS END=74907016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr2 74907017 . G . PASS END=74907017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 74907018 . C . PASS END=74907027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:17,0 chr2 74907028 . G . PASS END=74907028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 74907029 . G . PASS END=74907034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 74907035 . T . PASS END=74907035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 74907036 . C . PASS END=74907049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,706:0,51,255:19,0 chr2 74907050 . C . PASS END=74907050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 74907051 . T . PASS END=74907051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 74907052 . C . PASS END=74907053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 74907054 . C . PASS END=74907054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 74907055 . A . PASS END=74907058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 74907059 . T . PASS END=74907070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,690:0,44,255:19,0 chr2 74907071 . G . PASS END=74907071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 74907072 . T . PASS END=74907094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 74907095 . A . PASS END=74907096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 74907097 . C . PASS END=74907106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 74907107 . G . PASS END=74907108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:14,0 chr2 74907109 . G . PASS END=74907109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 74907110 . A . PASS END=74907110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,468:0,9,255:13,0 chr2 74907111 . C . PASS END=74907112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 74907113 . A . LowGQ END=74907117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:0:16:0,0,465:0,0,255:13,0 chr2 74907118 . G . PASS END=74907119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:14,0 chr2 74907120 . C . PASS END=74907121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:14,0 chr2 74907122 . T . PASS END=74907124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr2 74907125 . A . PASS END=74907129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,550:0,12,255:15,0 chr2 74907130 . G . PASS END=74907132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 74907133 . G . PASS END=74907133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr2 74907134 . C . PASS END=74907135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74907136 . C . PASS END=74907137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr2 74907138 . A . PASS END=74907138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 74907139 . C . PASS END=74907140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr2 74907141 . T . PASS END=74907141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 74907142 . T . PASS END=74907146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,452:0,9,255:15,0 chr2 74907147 . G . PASS END=74907147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74907148 . A . PASS END=74907148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr2 74907149 . C . PASS END=74907149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74907150 . C . PASS END=74907150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 74907151 . A . PASS END=74907152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 74907153 . A . PASS END=74907153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr2 74907154 . A . PASS END=74907155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 74907156 . C . PASS END=74907156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 74907157 . T . PASS END=74907157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,588:0,2,255:16,0 chr2 74907158 . A . PASS END=74907160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:16,0 chr2 74907161 . G . PASS END=74907161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr2 74907162 . C . PASS END=74907165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 74907166 . G . PASS END=74907166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:18,0 chr2 74907167 . A . PASS END=74907169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,621:0,21,255:16,0 chr2 74907170 . C . PASS END=74907173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 74907174 . C . PASS END=74907176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 74907177 . C . PASS END=74907177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 74907178 . C . PASS END=74907180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 74907181 . T . PASS END=74907181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 74907182 . C . PASS END=74907182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 74907183 . T . PASS END=74907183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:19,0 chr2 74907184 . C . PASS END=74907216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:26,0 chr2 74907217 . A . PASS END=74907219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 74907220 . A . PASS END=74907220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 74907221 . G . PASS END=74907264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:28:0,83,1025:0,83,255:31,0 chr2 74907265 . C . PASS END=74907265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 74907266 . C . PASS END=74907266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 74907267 . T . PASS END=74907267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 74907268 . T . PASS END=74907269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 74907270 . C . PASS END=74907274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:26,0 chr2 74907275 . G . PASS END=74907285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 74907286 . A . PASS END=74907286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 74907287 . T . PASS END=74907296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr2 74907297 . T . PASS END=74907297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:27,0 chr2 74907298 . G . PASS END=74907310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 74907311 . C . PASS END=74907320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,71,255:26,0 chr2 74907321 . T . PASS END=74907321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:23,0 chr2 74907322 . G . PASS END=74907332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr2 74907333 . C . PASS END=74907336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:22:0,54,810:0,56,255:19,0 chr2 74911306 . G . PASS END=74911397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,134,255:40,0 chr2 74917534 . A . PASS END=74917550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,2:95:99:93:0,120,1800:0,149,255:40,0 chr2 75061708 . A . PASS END=75061708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,988:0,51,255:29,0 chr2 75061709 . T . PASS END=75061709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 75061710 . G . PASS END=75061716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:30,0 chr2 75061717 . T . PASS END=75061717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:29,0 chr2 75061718 . C . PASS END=75061721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 75061722 . T . PASS END=75061722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr2 75061723 . C . PASS END=75061738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 75061739 . T . PASS END=75061739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 75061740 . C . PASS END=75061740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 75061741 . A . PASS END=75061741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:27,0 chr2 75061742 . C . PASS END=75061743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 75061744 . G . PASS END=75061744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 75061745 . A . PASS END=75061745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:25,0 chr2 75061746 . G . PASS END=75061752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:28,0 chr2 75061753 . C . PASS END=75061753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr2 75061754 . A . PASS END=75061756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,930:0,84,255:28,0 chr2 75061757 . A . PASS END=75061757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr2 75061758 . C . PASS END=75061760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:28,0 chr2 75061761 . A . PASS END=75061765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 75061766 . A . PASS END=75061766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 75061767 . G . PASS END=75061770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 75081420 . G . PASS END=75081431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr2 75081432 . C . PASS END=75081432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 75081433 . T . PASS END=75081440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,951:0,65,255:26,0 chr2 75081441 . A . PASS END=75081554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1125:0,82,255:40,0 chr2 75081555 . T . PASS END=75081555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1037:0,74,255:32,0 chr2 75081556 . T . PASS END=75081569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,92,255:33,0 chr2 75081570 . C . PASS END=75081582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,62,255:26,0 chr2 75094763 . A . PASS END=75094763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 75094764 . A . PASS END=75094764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 75094765 . C . PASS END=75094906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1270:0,81,255:40,0 chr2 75094907 . C . PASS END=75094911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:26,0 chr2 75099427 . C . PASS END=75099511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1168:0,86,255:37,0 chr2 75099512 . T . PASS END=75099512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,989:0,65,255:28,0 chr2 75099513 . C . PASS END=75099513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 75099514 . T . PASS END=75099521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,80,255:24,0 chr2 75099522 . C . PASS END=75099522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:22,0 chr2 75099523 . T . PASS END=75099525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 75099526 . C . PASS END=75099528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 75099529 . C . PASS END=75099542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:23,0 chr2 75099543 . C . PASS END=75099543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 75099544 . G . PASS END=75099545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 75099546 . G . PASS END=75099546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 75100403 . A . PASS END=75100404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 75100405 . T . PASS END=75100405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 75100406 . T . PASS END=75100414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:30,0 chr2 75100415 . T . PASS END=75100415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 75100416 . C . PASS END=75100419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 75100420 . G . PASS END=75100420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 75100421 . A . PASS END=75100481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:34,0 chr2 75100482 . C . PASS END=75100498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,71,255:25,0 chr2 75100971 . G . PASS END=75101070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,99,1485:0,112,255:40,0 chr2 75101393 . G . PASS END=75101422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:18,0 chr2 75101423 . A . PASS END=75101424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 75101425 . A . PASS END=75101425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr2 75101426 . T . PASS END=75101427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 75101428 . C . PASS END=75101428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr2 75101429 . G . PASS END=75101430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 75101431 . C . PASS END=75101432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 75101433 . C . PASS END=75101435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 75101436 . C . PASS END=75101441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 75101442 . G . PASS END=75101457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:24,0 chr2 75101458 . G . PASS END=75101539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1088:0,86,255:33,0 chr2 75101540 . A . PASS END=75101540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 75101541 . G . PASS END=75101547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 75101548 . A . PASS END=75101565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,953:0,62,255:26,0 chr2 75101566 . G . PASS END=75101566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 75101567 . G . PASS END=75101568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 75101569 . A . PASS END=75101570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,792:0,52,255:22,0 chr2 75101571 . G . PASS END=75101571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 75101572 . C . PASS END=75101572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr2 75101573 . A . PASS END=75101576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 75104293 . G . PASS END=75104314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,611:0,60,255:24,0 chr2 75104315 . A . PASS END=75104315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 75104316 . T . PASS END=75104331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,890:0,62,255:26,0 chr2 75104332 . G . PASS END=75104363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1096:0,87,255:39,0 chr2 75104364 . A . PASS END=75104364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:36,0 chr2 75104365 . G . PASS END=75104412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:37,0 chr2 75104413 . T . PASS END=75104428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,978:0,67,255:25,0 chr2 75104429 . G . PASS END=75104429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 75104430 . A . PASS END=75104448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr2 75105815 . G . PASS END=75105815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 75105816 . G . PASS END=75105818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 75105819 . A . PASS END=75105819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,604:0,27,255:18,0 chr2 75105820 . A . PASS END=75105824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 75105825 . G . PASS END=75105825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 75105826 . G . PASS END=75105835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 75105836 . G . PASS END=75105836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 75105837 . G . PASS END=75105845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 75105846 . G . PASS END=75105864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,823:0,69,255:25,0 chr2 75105865 . T . PASS END=75105865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 75105866 . G . PASS END=75105890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,817:0,69,255:23,0 chr2 75105891 . G . PASS END=75105891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 75105892 . C . PASS END=75105907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr2 75105908 . C . PASS END=75105923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,53,255:19,0 chr2 75105924 . C . PASS END=75105939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr2 75105940 . G . PASS END=75105940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 75105941 . C . PASS END=75105951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr2 75105952 . T . PASS END=75105952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 75105953 . G . PASS END=75105976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:12,0 chr2 75105977 . G . PASS END=75105977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 75105978 . G . PASS END=75106009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 75106010 . T . PASS END=75106010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr2 75106011 . A . PASS END=75106045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:12,0 chr2 75106046 . C . PASS END=75106046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 75106047 . C . PASS END=75106048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 75107392 . T . PASS END=75107392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 75107393 . T . PASS END=75107406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,621:0,41,255:18,0 chr2 75107407 . A . PASS END=75107432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:30,0 chr2 75107433 . C . PASS END=75107433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 75107434 . C . PASS END=75107440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 75107441 . G . PASS END=75107441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr2 75107442 . A . PASS END=75107508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1196:0,92,255:38,0 chr2 75107509 . C . PASS END=75107509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr2 75107510 . C . PASS END=75107696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1178:0,83,255:40,0 chr2 75108838 . A . PASS END=75108986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:29:0,81,1088:0,83,255:40,0 chr2 75109247 . C . PASS END=75109429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:42:0,117,1755:0,126,255:40,1 chr2 75112621 . A . PASS END=75112716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:40:0,84,1467:0,84,255:40,0 chr2 75113421 . G . PASS END=75113520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:39:0,87,1308:0,87,255:40,0 chr2 75113617 . G . PASS END=75113629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 75113630 . T . PASS END=75113630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 75113631 . G . PASS END=75113648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr2 75113649 . A . PASS END=75113649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,704:0,58,255:24,0 chr2 75113650 . T . PASS END=75113656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:29,0 chr2 75113657 . C T, 137.28 PASS DP=30;MQ=183.96;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,15,0:0,15,0:87:175,90,0,1139,90,1139:255,90,0:0,0:1.3728e+02,8.7282e+01,0.0000e+00,4.5000e+02,1.2205e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,12:0,0,15,15 chr2 75113658 . G . PASS END=75113679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:33,0 chr2 75113680 . A . PASS END=75113680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1071:0,72,255:31,0 chr2 75113681 . G . PASS END=75113694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:35:0,94,1246:0,94,255:39,0 chr2 75113695 . T . PASS END=75113751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,105,1429:0,106,255:40,0 chr2 75113752 . A . PASS END=75113770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:35,0 chr2 75113771 . T . PASS END=75113788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:25,0 chr2 75113789 . C G, 116.22 PASS DP=23;MQ=181.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,12:0,0,11,12 chr2 75113790 . G . PASS END=75113793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 75113794 . A . PASS END=75113800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:17,0 chr2 75115030 . G . PASS END=75115033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr2 75115034 . G . PASS END=75115034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 75115035 . A . PASS END=75115070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,702:0,62,255:26,0 chr2 75115071 . T . PASS END=75115073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 75115074 . G . PASS END=75115075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 75115076 . A . PASS END=75115077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 75115078 . C . PASS END=75115078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 75115079 . A . PASS END=75115080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:51:28:0,51,870:0,51,255:26,0 chr2 75115081 . T . PASS END=75115083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 75115084 . C . PASS END=75115084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 75115085 . A . PASS END=75115094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr2 75115095 . C . PASS END=75115107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,72,255:23,0 chr2 75115108 . A G, 119.23 PASS DP=24;MQ=222.23;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:69:157,72,0,922,72,922:255,72,0:0,0:1.1923e+02,6.9230e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,7:0,0,10,14 chr2 75115109 . C . PASS END=75115116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 75115117 . A . PASS END=75115117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 75115118 . G . PASS END=75115120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 75115121 . C . PASS END=75115124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:19,0 chr2 75115125 . T . PASS END=75115125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,782:0,28,255:16,0 chr2 75115126 . C . PASS END=75115145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:19:0,41,657:0,41,255:19,0 chr2 75115146 . G . PASS END=75115176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 75115177 . G . PASS END=75115178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 75115179 . T . PASS END=75115179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 75115180 . T . PASS END=75115180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 75115181 . G . PASS END=75115185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 75116372 . T . PASS END=75116376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:26,0 chr2 75116377 . G . PASS END=75116377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 75116378 . C . PASS END=75116381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 75116382 . G . PASS END=75116401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:30,0 chr2 75116402 . C . PASS END=75116402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 75116403 . A . PASS END=75116589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:32:0,90,1299:0,95,255:40,0 chr2 75116590 . A . PASS END=75116599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,105,255:35,0 chr2 75116600 . T . PASS END=75116605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:31:0,75,1125:0,93,255:26,0 chr2 75117924 . C . PASS END=75117933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 75117934 . G . PASS END=75117948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:19,0 chr2 75117949 . G . PASS END=75117958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,886:0,69,255:24,0 chr2 75117959 . T . PASS END=75117959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 75117960 . G . PASS END=75117963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,922:0,72,255:26,0 chr2 75117964 . C . PASS END=75117987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:28,0 chr2 75117988 . C . PASS END=75117995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 75117996 . G . PASS END=75117999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr2 75118000 . G . PASS END=75118004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 75118005 . C . PASS END=75118009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 75118010 . A . PASS END=75118010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 75118011 . G . PASS END=75118022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1186:0,93,255:31,0 chr2 75118023 . C . PASS END=75118040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 75118041 . C . PASS END=75118041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 75118042 . C . PASS END=75118051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 75118052 . A . PASS END=75118053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr2 75118054 . G . PASS END=75118061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr2 75118062 . G . PASS END=75118068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 75185807 . A . PASS END=75185807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 75185808 . T . LowGQ END=75185812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:11:0,0,296:0,0,255:12,1 chr2 75185813 . G . PASS END=75185818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 75185819 . G . PASS END=75185855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr2 75185856 . G T, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=0.533;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,8,0:0.615,0.000:13:3,3,0:2,5,0:48:85,0,48,286,150,436:255,0,133:5,0:5.0000e+01,7.6105e-05,5.1230e+01,2.8610e+02,1.8475e+02,4.3899e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,1,4,4:2,3,3,5 chr2 75185857 . A . PASS END=75185860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 75185861 . G . PASS END=75185861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 75185862 . C . PASS END=75185863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 75185864 . G . PASS END=75185864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 75185865 . G . PASS END=75185879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 75185880 . C . PASS END=75185883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 75185884 . G . PASS END=75185891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 75185892 . C . PASS END=75185893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 75185894 . C . PASS END=75185895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 75185896 . A . PASS END=75185897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 75185898 . C . PASS END=75185904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 75185905 . G . PASS END=75185921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 75185922 . C . PASS END=75185922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 75185923 . G . PASS END=75185944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,607:0,48,255:19,0 chr2 75185945 . A . PASS END=75185945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 75185946 . A . PASS END=75185946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 75185947 . G . PASS END=75185951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 75185952 . T . PASS END=75185952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 75185953 . G . PASS END=75185958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr2 75185959 . G . PASS END=75185959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 75185960 . G . PASS END=75185981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:22,0 chr2 75185982 . C . PASS END=75185995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr2 75185996 . A . PASS END=75185996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:15,0 chr2 75185997 . T . PASS END=75186019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr2 75186468 . G . PASS END=75186468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 75186469 . A . PASS END=75186484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,951:0,65,255:26,0 chr2 75186485 . C . PASS END=75186487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 75186488 . T . PASS END=75186488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 75186489 . G . PASS END=75186536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1012:0,86,255:34,0 chr2 75186537 . C . PASS END=75186538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 75186539 . G . PASS END=75186549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 75186550 . T . PASS END=75186550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 75186551 . G . PASS END=75186552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 75187232 . A . PASS END=75187273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:37:0,93,1289:0,93,255:40,0 chr2 75196536 . G . PASS END=75196549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,203,255:40,0 chr2 75276559 . C . PASS END=75276562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 75276563 . G . PASS END=75276563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr2 75276564 . A . PASS END=75276595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,554:0,41,255:19,0 chr2 75276596 . G . PASS END=75276598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 75276599 . A . PASS END=75276599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 75276600 . T . PASS END=75276610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr2 75276611 . T . PASS END=75276611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 75276612 . C . PASS END=75276625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:68:23:0,68,705:0,68,255:23,0 chr2 75276626 . C . PASS END=75276626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 75276627 . A . PASS END=75276643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr2 75276644 . A . PASS END=75276644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 75276645 . G . PASS END=75276652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr2 75276653 . G . PASS END=75276737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,83,255:33,0 chr2 75276738 . A . PASS END=75276802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,792:0,66,255:26,0 chr2 75276803 . C . PASS END=75276815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr2 75276816 . A . PASS END=75276816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 75276817 . G . PASS END=75276831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,48,255:16,0 chr2 75276832 . C . PASS END=75276850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 75278374 . T . PASS END=75278374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 75278375 . C . PASS END=75278375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 75278376 . A . PASS END=75278376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 75278377 . C . PASS END=75278377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 75278378 . C . PASS END=75278378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 75278379 . T . PASS END=75278384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr2 75278385 . T . PASS END=75278385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 75278386 . G . PASS END=75278390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 75278391 . A . PASS END=75278391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 75278392 . G . PASS END=75278396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr2 75278397 . A . PASS END=75278398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 75278399 . A . PASS END=75278401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1085:0,90,255:31,0 chr2 75278402 . A . PASS END=75278402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 75278403 . T . PASS END=75278418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:31:0,86,1141:0,86,255:36,0 chr2 75278419 . G . PASS END=75278421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:36,0 chr2 75278422 . G . PASS END=75278508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,101,1358:0,101,255:40,0 chr2 75278509 . G . PASS END=75278509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:35,0 chr2 75278510 . A . PASS END=75278556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,101,255:40,0 chr2 75278557 . A . PASS END=75278568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,1106:0,63,255:26,0 chr2 75278569 . G . PASS END=75278569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr2 75278570 . A . PASS END=75278574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 75280732 . C . PASS END=75280732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 75280733 . T . PASS END=75280733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 75280734 . T . PASS END=75280800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1125:0,81,255:38,0 chr2 75280801 . T . PASS END=75280806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr2 75280807 . T . PASS END=75280850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1097:0,80,255:32,0 chr2 75280851 . A . PASS END=75280851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 75280852 . G . PASS END=75280852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 75280853 . T . PASS END=75280855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1147:0,77,255:26,0 chr2 75280856 . A . PASS END=75280858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 75280859 . A . PASS END=75280870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 75280871 . C . PASS END=75280878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:21:0,42,630:0,63,255:18,0 chr2 75280879 . G . PASS END=75280882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:19:0,33,495:0,57,255:13,0 chr2 75347700 . A . PASS END=75347702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:19,0 chr2 75347703 . T . PASS END=75347703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:18,0 chr2 75347704 . T . PASS END=75347704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 75347705 . C . PASS END=75347705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,587:0,10,255:17,0 chr2 75347706 . T . PASS END=75347706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,598:0,27,255:18,0 chr2 75347707 . C . PASS END=75347707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,587:0,10,255:17,0 chr2 75347708 . A . PASS END=75347708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 75347709 . T . PASS END=75347709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr2 75347710 . A . PASS END=75347712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr2 75347713 . T . PASS END=75347713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 75347714 . C . LowGQ END=75347714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,510:20,0,255:16,0 chr2 75347715 . T . PASS END=75347716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 75347717 . G . PASS END=75347717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,620:0,27,255:18,0 chr2 75347718 . T . PASS END=75347718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr2 75347719 . T . PASS END=75347719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 75347720 . C . LowGQ END=75347720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,504:26,0,255:17,0 chr2 75347721 . G . PASS END=75347721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 75347722 . G . PASS END=75347724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,582:0,13,255:18,0 chr2 75347725 . G . LowGQ END=75347725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,612:6,0,255:18,0 chr2 75347726 . C . PASS END=75347727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:20,0 chr2 75347728 . C . LowGQ END=75347729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,6:22:0:22:0,0,491:17,0,255:16,0 chr2 75347730 . G . PASS END=75347730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 75347731 . G . LowGQ END=75347731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,557:0,0,255:17,0 chr2 75347732 . C . PASS END=75347732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 75347733 . C . PASS END=75347733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,568:0,16,255:18,0 chr2 75347734 . A . LowGQ END=75347734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,523:23,0,255:18,0 chr2 75347735 . T . PASS END=75347735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr2 75347736 . T . PASS END=75347737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,537:0,13,255:18,0 chr2 75347738 . G . LowGQ END=75347738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,504:4,0,255:17,0 chr2 75347739 . A . PASS END=75347739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr2 75347740 . T . PASS END=75347740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,537:0,13,255:18,0 chr2 75347741 . C . PASS END=75347741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,599:0,30,255:19,0 chr2 75347742 . A . PASS END=75347742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:20,0 chr2 75347743 . T . LowGQ END=75347744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:21:0,0,358:14,0,255:18,0 chr2 75347745 . C . PASS END=75347745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,771:0,69,255:23,0 chr2 75347746 . A . LowGQ END=75347746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,6:23:0:23:0,0,471:31,0,255:16,0 chr2 75347747 . C . PASS END=75347747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 75347748 . A . PASS END=75347748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 75347749 . C . PASS END=75347751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:26,0 chr2 75347752 . C . PASS END=75347752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr2 75347753 . T . PASS END=75347753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 75347754 . C . PASS END=75347758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 75347759 . G . PASS END=75347764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 75347765 . G . PASS END=75347797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1211:0,88,255:35,0 chr2 75347798 . G . PASS END=75347870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1063:0,83,255:38,0 chr2 75347871 . A . PASS END=75347871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 75347872 . G . PASS END=75347872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 75347873 . G . PASS END=75347874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 75347875 . G . PASS END=75347875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 75347876 . A . PASS END=75347889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr2 75347890 . T . PASS END=75347894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:25:0,45,675:0,75,255:19,0 chr2 75425672 . C . PASS END=75425672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr2 75425673 . T . PASS END=75425689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,760:0,63,255:25,0 chr2 75425690 . G . PASS END=75425690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 75425691 . T . PASS END=75425697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:29,0 chr2 75425698 . G . PASS END=75425698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 75425699 . T . PASS END=75425705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1097:0,82,255:32,0 chr2 75425706 . T . PASS END=75425706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:31,0 chr2 75425707 . G . PASS END=75425712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:35,0 chr2 75425713 . G . PASS END=75425713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:35,0 chr2 75425714 . A . PASS END=75425727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1205:0,91,255:37,0 chr2 75425728 . A G, 49.82 PASS DP=38;MQ=250.00;MQRankSum=5.248;ReadPosRankSum=3.114;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,18,0:0.474,0.000:38:10,7,0:10,11,0:48:85,0,50,644,677,1321:255,0,255:19,0:4.9820e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,10,12,6:12,8,9,9 chr2 75425729 . A . PASS END=75425765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:94:35:0,94,1304:0,94,255:40,0 chr2 75425766 . A . PASS END=75425808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:37:0,82,1305:0,82,255:40,0 chr2 75425809 . G . PASS END=75425810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1357:0,75,255:30,0 chr2 75425811 . A . PASS END=75425811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr2 75425812 . T . PASS END=75425815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1127:0,60,255:30,0 chr2 75425816 . G . PASS END=75425816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1163:0,47,255:27,0 chr2 75425817 . C . PASS END=75425817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1263:0,86,255:28,0 chr2 75425818 . C . PASS END=75425820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1188:0,63,255:28,0 chr2 75425821 . G . PASS END=75425821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 75425822 . G . PASS END=75425822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:27,0 chr2 75425823 . A . PASS END=75425824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 75425825 . G . PASS END=75425831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,986:0,48,255:26,0 chr2 75425832 . C . PASS END=75425833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 75425834 . A . PASS END=75425835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr2 75425836 . G . PASS END=75425838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,978:0,45,255:26,0 chr2 75425839 . C . PASS END=75425839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:23,0 chr2 75425840 . A . PASS END=75425841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr2 75425842 . G . PASS END=75425842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:24,0 chr2 75425843 . T . PASS END=75425844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:24,0 chr2 75425845 . C . PASS END=75425845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 75425846 . A . PASS END=75425846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,915:0,42,255:24,0 chr2 75425847 . C . PASS END=75425849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 75425850 . G . PASS END=75425851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr2 75425852 . A . PASS END=75425856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 75425857 . G . PASS END=75425858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 75425859 . T . PASS END=75425862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 75425863 . C . PASS END=75425863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 75425864 . A . PASS END=75425870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,1002:0,70,255:26,0 chr2 75425871 . T . PASS END=75425871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:24,0 chr2 75425872 . C . PASS END=75425879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,925:0,64,255:26,0 chr2 75425880 . T . PASS END=75425880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 75425881 . G . PASS END=75425883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 75425884 . G . PASS END=75425884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 75425885 . G . PASS END=75425888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:77:29:0,77,1116:0,77,255:27,0 chr2 75425889 . A . PASS END=75425923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1149:0,82,255:33,0 chr2 75425924 . G . PASS END=75425925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:71:34:0,71,1170:0,71,255:26,0 chr2 75425926 . G . PASS END=75425941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:30,0 chr2 75425942 . G . PASS END=75425943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 75425944 . G . PASS END=75425951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr2 75425952 . C . PASS END=75425952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:26,0 chr2 75425953 . T . PASS END=75425964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 75425965 . A . PASS END=75425965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 75425966 . A . PASS END=75425975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 75425976 . C . PASS END=75426027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,931:0,64,255:26,0 chr2 75426028 . G . PASS END=75426041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,50,255:19,0 chr2 75426042 . C . PASS END=75426042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:15,0 chr2 75426043 . C . PASS END=75426046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 75426047 . A . PASS END=75426060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:14:0,31,495:0,31,255:13,0 chr2 75435887 . A . PASS END=75435911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:19,0 chr2 75435912 . G . PASS END=75435914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 75435915 . T . PASS END=75435915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:24,0 chr2 75435916 . T . PASS END=75435920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,902:0,75,255:26,0 chr2 75435921 . G . PASS END=75436182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,932:0,81,255:40,0 chr2 75436183 . T . PASS END=75436219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,124,255:40,0 chr2 75436220 . G T, 48.31 PASS DP=51;MQ=250.00;MQRankSum=6.057;ReadPosRankSum=4.498;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,22,0:0.431,0.000:51:10,8,0:19,14,0:47:83,0,50,729,971,1701:255,0,255:29,0:4.8313e+01,8.5683e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,11,12,10:15,14,14,8 chr2 75436221 . T . PASS END=75436257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,112,1800:0,112,255:40,0 chr2 75436258 . C . PASS END=75436403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,1:116:99:69:0,120,1800:0,181,255:40,0 chr2 75503636 . A . PASS END=75503725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,112,1800:0,112,255:40,0 chr2 75505204 . C . PASS END=75505232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,140,255:40,0 chr2 75720362 . C . PASS END=75720366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 75720367 . A . PASS END=75720367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 75720368 . G . PASS END=75720368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 75720369 . T . PASS END=75720369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 75720370 . A . PASS END=75720383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 75720384 . C . PASS END=75720384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 75720385 . T . PASS END=75720395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 75720396 . A . PASS END=75720413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr2 75720414 . A . PASS END=75720414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 75720415 . T . PASS END=75720420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 75720421 . T . PASS END=75720421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 75720422 . C . PASS END=75720426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:17,0 chr2 75720427 . T . PASS END=75720427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 75720428 . G . PASS END=75720444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 75720445 . C . PASS END=75720481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr2 75720482 . G . PASS END=75720492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1011:0,87,255:29,0 chr2 75720493 . T . PASS END=75720493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 75720494 . C . PASS END=75720496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 75720497 . G . PASS END=75720508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 75720509 . C . PASS END=75720536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1026:0,82,255:31,0 chr2 75720537 . A . PASS END=75720537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,967:0,76,255:28,0 chr2 75720538 . G . PASS END=75720598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1185:0,80,255:35,0 chr2 75720599 . G . PASS END=75720599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr2 75720600 . T . PASS END=75720603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,91,255:32,0 chr2 75720604 . G . PASS END=75720604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:28,0 chr2 75720605 . C . PASS END=75720607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,92,255:28,0 chr2 75720608 . G . PASS END=75720608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:26,0 chr2 75720609 . A . PASS END=75720610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1157:0,82,255:28,0 chr2 75720611 . C . PASS END=75720615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:30:0,60,1034:0,60,255:29,0 chr2 75720616 . T . PASS END=75720616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 75720617 . C . PASS END=75720617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 75720618 . C . PASS END=75720619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 75720620 . G . PASS END=75720620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr2 75720621 . G . PASS END=75720622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 75720623 . A . PASS END=75720623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 75720624 . C . PASS END=75720624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:26,0 chr2 75720625 . G . PASS END=75720629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1070:0,74,255:26,0 chr2 75720630 . C . PASS END=75720632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 75720633 . C . PASS END=75720633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 75720634 . A . PASS END=75720647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr2 75720648 . G . PASS END=75720648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 75720649 . A . PASS END=75720654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 75720655 . T . PASS END=75720655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 75720656 . T . PASS END=75720659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 75720660 . A . PASS END=75720673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1025:0,73,255:26,0 chr2 75720674 . G . PASS END=75720675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 75720676 . T . PASS END=75720707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 75720708 . A . PASS END=75720735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,645:0,44,255:18,0 chr2 75744939 . T . PASS END=75744987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,125,255:40,0 chr2 75745182 . C . PASS END=75745266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,99,1485:0,107,255:40,0 chr2 75873934 . A . PASS END=75873956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr2 75873957 . G . PASS END=75873974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 75873975 . C . PASS END=75873975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:25,0 chr2 75873976 . C . PASS END=75873983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 75873984 . G . PASS END=75874006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:28,0 chr2 75874007 . T . PASS END=75874031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr2 75874032 . C . PASS END=75874036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 75874228 . G . PASS END=75874228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 75874229 . G . PASS END=75874267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:18,0 chr2 75874268 . T . PASS END=75874289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,646:0,60,255:20,0 chr2 75874290 . C . PASS END=75874300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 75874301 . A . PASS END=75874307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 75874308 . A . PASS END=75874308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 75874309 . T . PASS END=75874311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 75874312 . T . PASS END=75874318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 75874319 . G . PASS END=75874319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:17,0 chr2 75874320 . C . PASS END=75874332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:18,0 chr2 75874333 . A . PASS END=75874338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 75874339 . A . LowGQ END=75874339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:13,0 chr2 75874340 . A . PASS END=75874345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 75879268 . G . PASS END=75879386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:42:0,108,1620:0,120,255:40,0 chr2 75879649 . G . PASS END=75879783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:39:0,101,1411:0,101,255:40,0 chr2 75881862 . G . PASS END=75881865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:44:0,104,1592:0,104,255:40,0 chr2 75881866 . C . PASS END=75882043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,107,1350:0,107,255:40,0 chr2 75882190 . C . PASS END=75882191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:81:51:0,81,1518:0,81,255:40,0 chr2 75882192 . G . PASS END=75882192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:55:50:0,55,1472:0,55,255:40,0 chr2 75882193 . A . PASS END=75882195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,130,255:40,0 chr2 75882196 . G . PASS END=75882196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:77:50:0,77,1414:0,77,255:40,0 chr2 75882197 . T . PASS END=75882197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:56:50:0,56,1532:0,56,255:40,0 chr2 75882198 . A . PASS END=75882206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:94:47:0,94,1477:0,94,255:40,0 chr2 75882207 . G . PASS END=75882207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:77:55:0,77,1754:0,77,255:40,0 chr2 75882208 . C . PASS END=75882209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,160,255:40,0 chr2 75882210 . T . PASS END=75882210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:74:59:0,74,1902:0,74,255:40,0 chr2 75882211 . A . PASS END=75882353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:59:0,120,1800:0,139,255:40,0 chr2 75882354 . T . PASS END=75882354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,11:88:44:88:0,44,2274:0,44,255:40,0 chr2 75882355 . A . PASS END=75882411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,170,255:40,0 chr2 75891792 . T . PASS END=75891909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:44:0,120,1800:0,128,255:40,0 chr2 75893055 . C . PASS END=75893179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,120,1800:0,142,255:40,0 chr2 75897264 . C . PASS END=75897410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,102,1514:0,102,255:40,0 chr2 75897705 . C . PASS END=75897706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:31,0 chr2 75897707 . G . PASS END=75897707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 75897708 . G . PASS END=75897749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1117:0,80,255:34,0 chr2 75899076 . C . PASS END=75899142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,99,1595:0,99,255:40,0 chr2 75900570 . C . PASS END=75900646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:66:0,120,1800:0,176,255:40,0 chr2 75906901 . G . PASS END=75906947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,150,255:40,0 chr2 75907319 . C . PASS END=75907350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:48:0,95,1679:0,95,255:40,0 chr2 75907351 . T C, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.792;ReadPosRankSum=4.254;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,34,0:0.540,0.000:63:17,12,0:12,22,0:48:85,0,50,1101,992,2093:255,0,255:28,0:5.0000e+01,6.7563e-05,5.2571e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,23,11:15,14,15,19 chr2 75907352 . G . PASS END=75907388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:63:0,120,1800:0,162,255:40,0 chr2 75907389 . A . PASS END=75907440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:57:0,119,1800:0,119,255:40,0 chr2 75914953 . C . PASS END=75914997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,167,255:40,0 chr2 75914998 . C . PASS END=75915034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:74:0,120,1800:0,215,255:40,0 chr2 75915035 . C T, 48.97 PASS DP=88;MQ=250.00;MQRankSum=8.022;ReadPosRankSum=1.613;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,39,0:0.443,0.000:88:24,18,0:25,21,0:48:84,0,50,1385,1671,3056:255,0,255:40,0:4.8968e+01,7.6882e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,20,19,20:28,21,16,23 chr2 75915036 . A . PASS END=75915072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,153,255:40,0 chr2 75915073 . A . PASS END=75915103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,99,1485:0,116,255:40,0 chr2 75916152 . C . PASS END=75916351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,104,1408:0,104,255:40,0 chr2 75917095 . C . PASS END=75917207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:43:0,91,1513:0,91,255:40,0 chr2 75917739 . T . PASS END=75917845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:58:0,120,1800:0,158,255:40,0 chr2 75919103 . G . PASS END=75919225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:41:0,114,1710:0,123,255:40,0 chr2 75919226 . T . PASS END=75919226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:41:0,96,1440:0,123,255:32,0 chr2 75921367 . C . PASS END=75921553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:34:0,99,1485:0,102,255:40,0 chr2 75923326 . C . PASS END=75923375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:64:0,120,1800:0,176,255:40,0 chr2 75923376 . A . PASS END=75923412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,176,255:40,0 chr2 75923413 . T C, 49.95 PASS DP=78;MQ=249.90;MQRankSum=7.592;ReadPosRankSum=5.573;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,38,0:0.487,0.000:78:21,18,0:19,20,0:48:85,0,50,1351,1419,2770:255,0,255:36,0:4.9946e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,23,12,26:20,20,22,16 chr2 75923414 . T . PASS END=75923441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,120,1800:0,138,255:40,0 chr2 75928316 . C . PASS END=75928337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,120,1800:0,202,255:40,0 chr2 75928338 . C . PASS END=75928413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:81:0,120,1800:0,226,255:40,0 chr2 75929296 . C . PASS END=75929573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:39:0,87,1357:0,87,255:40,0 chr2 75933649 . C . PASS END=75933777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:33:0,89,1253:0,89,255:40,0 chr2 75937625 . T . PASS END=75937625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 75937626 . T . PASS END=75937626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 75937627 . A . PASS END=75937631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 75937632 . A . PASS END=75937632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 75937633 . C . PASS END=75937644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 75937645 . G . PASS END=75937645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 75937646 . A . PASS END=75937659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 75937660 . C . PASS END=75937660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 75937661 . G . PASS END=75937661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr2 75937662 . G . PASS END=75937662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 75937663 . C . PASS END=75937674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:26,0 chr2 75937675 . C . PASS END=75937675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 75937676 . T . PASS END=75937693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 75937694 . C . PASS END=75937694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 75937695 . T . PASS END=75937695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,996:0,51,255:28,0 chr2 75937696 . T . PASS END=75937699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 75937700 . C . PASS END=75937700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr2 75937701 . G . PASS END=75937701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 75937702 . C . PASS END=75937702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 75937703 . G . PASS END=75937704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr2 75937705 . C . PASS END=75937708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 75937709 . C . PASS END=75937709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:27,0 chr2 75937710 . T . PASS END=75937719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 75937720 . A . PASS END=75937720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:29,0 chr2 75937721 . G . PASS END=75937745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:32,0 chr2 75937746 . T . PASS END=75937746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:27,0 chr2 75937747 . T . PASS END=75937763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:31,0 chr2 75937764 . C . PASS END=75937772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 75937773 . A . PASS END=75937780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,1024:0,60,255:26,0 chr2 75937781 . C . PASS END=75937781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:24,0 chr2 75937782 . C . PASS END=75937786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 75937787 . A . PASS END=75937787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr2 75937788 . C . PASS END=75937800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr2 75937801 . C T, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.188;ReadPosRankSum=2.217;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,14,0:0.560,0.000:25:6,8,0:5,6,0:48:85,0,49,501,382,883:255,0,255:9,0:5.0000e+01,6.9634e-05,5.2214e+01,4.5000e+02,4.1710e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,9,7,7:7,4,9,5 chr2 75937802 . C . PASS END=75937803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 75937804 . G . PASS END=75937804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 75937805 . G . PASS END=75937812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,908:0,72,255:24,0 chr2 75937813 . G . PASS END=75937816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 75937817 . C . PASS END=75937828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,837:0,66,255:22,0 chr2 75937829 . G . PASS END=75937829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 75937830 . C . PASS END=75937833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,837:0,66,255:22,0 chr2 75937834 . C . PASS END=75937838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 75937839 . C . PASS END=75937850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,57,255:18,0 chr2 75937851 . T . PASS END=75937851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,576:0,5,255:16,0 chr2 75937852 . C . PASS END=75937860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:18,0 chr2 75937861 . C . PASS END=75937871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,41,255:13,0 chr2 75937872 . A . PASS END=75937879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 75937880 . T . PASS END=75937880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:13,0 chr2 75937881 . T . PASS END=75937885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr2 75937886 . C . PASS END=75937886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 75937887 . G . PASS END=75937891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 75937892 . C . PASS END=75937902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 75937903 . C . PASS END=75937905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 75937906 . G . PASS END=75937906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr2 75937907 . C . PASS END=75937918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 75937919 . G . PASS END=75937919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 75937920 . C . PASS END=75937920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 75937921 . C . PASS END=75937924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 75937925 . G . PASS END=75937925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 75937926 . C . PASS END=75937930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 75937931 . G . PASS END=75937931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 75937932 . C . PASS END=75937945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr2 75937946 . G . PASS END=75937946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 75937947 . C . PASS END=75937958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 75937959 . G . PASS END=75937962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:8:0,11,270:0,11,255:6,0 chr2 75937963 . T . PASS END=75937963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:5,0 chr2 75937964 . T . PASS END=75937965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 75937966 . T . PASS END=75937967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 75937968 . G . PASS END=75937968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 75937969 . G . PASS END=75937970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 75937971 . C . PASS END=75937977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 75937978 . C . PASS END=75937978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 75937979 . C . PASS END=75937981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:6,0 chr2 76975821 . T . PASS END=76975821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:23,0 chr2 76975822 . T . PASS END=76975823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 76975824 . G . PASS END=76975824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 76975825 . T . PASS END=76975825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:74:25:0,74,745:0,74,255:25,0 chr2 76975826 . T . PASS END=76975826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 76975827 . T . PASS END=76975827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 76975828 . G . PASS END=76975828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:24,0 chr2 76975829 . C . PASS END=76975829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 76975830 . A . PASS END=76975832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 76975833 . T . PASS END=76975840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,878:0,61,255:26,0 chr2 76975841 . G . PASS END=76975841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr2 76975842 . G . PASS END=76975847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,894:0,64,255:26,0 chr2 76975848 . G . PASS END=76975848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,843:0,45,255:24,0 chr2 76975849 . G . PASS END=76975871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,864:0,62,255:26,0 chr2 76975872 . G . PASS END=76975872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:24,0 chr2 76975873 . G . PASS END=76975876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 76975877 . C . PASS END=76975879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 76975880 . T . PASS END=76975880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 76975881 . G . PASS END=76975890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 76975891 . T . PASS END=76975891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr2 76975892 . C . PASS END=76975894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 76975895 . G . PASS END=76975895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:26,0 chr2 76975896 . G . PASS END=76976006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1166:0,86,255:40,0 chr2 76976007 . G . PASS END=76976008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:30,2 chr2 76976009 . T . PASS END=76976027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 76976028 . C . PASS END=76976028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 76976029 . A . PASS END=76976030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 76976031 . G . PASS END=76976042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:23,0 chr2 77745438 . T . PASS END=77745451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 77745452 . C . PASS END=77746943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:28:0,81,1063:0,84,255:40,0 chr2 77746944 . C . PASS END=77746944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr2 77746945 . A . PASS END=77746960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1305:0,101,255:37,0 chr2 77746961 . T . PASS END=77746988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 77746989 . A . PASS END=77746990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 77748794 . C . PASS END=77748797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:99:0,120,1800:0,255,255:40,0 chr2 77749235 . C . PASS END=77749241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr2 79253220 . A . PASS END=79253295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,134,255:40,0 chr2 79253839 . G . PASS END=79253918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:37:0,93,1300:0,94,255:40,0 chr2 79253919 . G . PASS END=79253919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:30,0 chr2 79253920 . C . PASS END=79253936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:31,0 chr2 79253937 . A . PASS END=79253950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,945:0,79,255:25,0 chr2 79253951 . T . PASS END=79253952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr2 79253953 . C . PASS END=79253953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 79253954 . A . PASS END=79253956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 79253957 . T . PASS END=79253957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 79254160 . C . PASS END=79254223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:94:35:0,94,1250:0,94,255:40,0 chr2 79254224 . T . PASS END=79254260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1305:0,98,255:40,0 chr2 79254261 . T C, 147.87 PASS DP=34;MQ=142.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,23,0:0,11,0:99:186,102,0,1289,102,1289:255,102,0:0,0:1.4787e+02,9.8871e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,20:0,0,13,21 chr2 79254262 . T . PASS END=79254268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:30,0 chr2 79254269 . T . PASS END=79254277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 79254278 . G . PASS END=79254278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 79254279 . G . PASS END=79254279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 79254280 . C . PASS END=79254285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 79254286 . G . PASS END=79254297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:25,0 chr2 79254933 . G . PASS END=79254948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1186:0,86,255:34,0 chr2 79254949 . G A, 29.53 PASS DP=36;MQ=244.48;MQRankSum=1.534;ReadPosRankSum=-0.256;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,9,0:0.250,0.000:36:11,6,0:16,3,0:30:64,0,50,303,963,1265:225,0,255:25,0:2.9532e+01,4.8618e-03,5.3005e+01,3.0256e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,13,4,5:14,13,5,4 chr2 79254950 . A . PASS END=79254986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:35:0,88,1197:0,88,255:40,0 chr2 79254987 . T . PASS END=79255059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:98:36:0,98,1349:0,98,255:40,0 chr2 79255335 . G . PASS END=79255388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,200,255:40,0 chr2 79255389 . A . PASS END=79255402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:81:0,120,1800:0,230,255:40,0 chr2 79312332 . T . PASS END=79312376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:71:0,120,1800:0,188,255:40,0 chr2 79312377 . T . PASS END=79312409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,191,255:40,0 chr2 79312532 . C . PASS END=79312724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:30:0,84,1260:0,90,255:40,0 chr2 79312725 . C . PASS END=79312729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,926:0,70,255:24,0 chr2 79313493 . C . PASS END=79313501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 79313502 . G . PASS END=79313502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr2 79313503 . T . PASS END=79313509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,900:0,72,255:26,0 chr2 79313510 . G . PASS END=79313609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1078:0,83,255:40,0 chr2 79313610 . A . PASS END=79313610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:30,0 chr2 79313611 . T . PASS END=79313630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1288:0,102,255:34,0 chr2 79313938 . A . PASS END=79314019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,141,255:40,0 chr2 79314020 . A . PASS END=79314056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,120,1800:0,127,255:40,0 chr2 79314675 . C . PASS END=79314738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,142,255:40,0 chr2 79347988 . A . PASS END=79348051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,120,1800:0,129,255:40,0 chr2 79348688 . G . PASS END=79348806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,107,1504:0,107,255:40,0 chr2 79349114 . C . PASS END=79349125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1213:0,89,255:35,0 chr2 79349126 . A . PASS END=79349126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1275:0,75,255:34,0 chr2 79349127 . A . PASS END=79349136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1357:0,98,255:36,0 chr2 79349137 . G . PASS END=79349137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1262:0,75,255:35,0 chr2 79349138 . G . PASS END=79349197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,87,255:39,0 chr2 79349198 . G . PASS END=79349213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1055:0,74,255:26,0 chr2 79349214 . A . PASS END=79349214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr2 79349215 . C . PASS END=79349218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:25,0 chr2 79349219 . A . PASS END=79349219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr2 79349220 . A . PASS END=79349236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 79349237 . C . PASS END=79349237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 79349238 . A . PASS END=79349250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 79349251 . G . PASS END=79349251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:18,0 chr2 79349967 . A . PASS END=79349978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,946:0,62,255:26,0 chr2 79349979 . C . PASS END=79349984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr2 79349985 . A . PASS END=79349985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 79349986 . G . PASS END=79349999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:30,0 chr2 79350000 . G . PASS END=79350000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 79350001 . T . PASS END=79350033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1088:0,83,255:33,0 chr2 79350034 . G . PASS END=79350034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 79350035 . C . PASS END=79350039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 79350040 . T . PASS END=79350043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr2 79350044 . T . PASS END=79350044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:23,0 chr2 79350045 . C . PASS END=79350047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 79350048 . G . PASS END=79350051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 79350052 . A . PASS END=79350073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,68,255:23,0 chr2 79350074 . C . PASS END=79350078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 79350274 . G . PASS END=79350293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,120,1800:0,121,255:40,0 chr2 79350294 . G . PASS END=79350309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,143,255:40,0 chr2 79350310 . A . PASS END=79350341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,109,1800:0,109,255:40,0 chr2 79384352 . C . PASS END=79384419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,188,255:40,0 chr2 79384698 . C . PASS END=79384824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1066:0,87,255:40,0 chr2 79385452 . C . PASS END=79385583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:88:33:0,88,1440:0,88,255:40,0 chr2 79385584 . G . PASS END=79385584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:19:45:0,19,1466:0,19,255:40,0 chr2 79385585 . G . PASS END=79385587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 79385588 . A . PASS END=79385589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 79385777 . A . PASS END=79385785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,159,255:40,0 chr2 79385786 . T C, 17.36 PASS DP=62;MQ=200.16;MQRankSum=-5.325;ReadPosRankSum=1.733;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:49,12,0:0.197,0.000:61:19,6,0:30,6,0:17:52,0,47,152,152,152:255,0,255:40,0:1.7361e+01,8.0534e-02,5.0081e+01,1.5213e+02,1.8690e+02,1.5514e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,23,5,7:18,31,9,3:79385786 chr2 79385787 . G A, 17.36 PASS DP=66;MQ=201.46;MQRankSum=-5.328;ReadPosRankSum=1.837;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:54,12,0:0.182,0.000:66:20,6,0:34,6,0:17:52,0,47,152,152,152:215,0,255:40,0:1.7361e+01,8.0534e-02,5.0081e+01,1.5213e+02,1.8690e+02,1.5514e+02:0.00,34.77,37.78,34.77,69.54,37.78:30,24,5,7:20,34,9,3:79385786 chr2 79385788 . T . PASS END=79385822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:66:0,120,1800:0,145,255:40,0 chr2 79385823 . T G,A, 6.52 DRAGENSnpHardQUAL DP=71;MQ=205.64;MQRankSum=-4.780;ReadPosRankSum=0.141;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:58,11,2,0:0.155,0.028,0.000:71:25,5,0,0:33,6,2,0:7:40,0,50,377,1993,427,391,2006,2384,2397:240,0,255:40,0:6.5243e+00,1.0937e+00,5.4094e+01,3.7779e+02,4.5000e+02,4.3083e+02,3.9174e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:26,32,3,10:29,29,7,6 chr2 79385824 . G . PASS END=79385856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,132,255:40,0 chr2 79385857 . G T, 8.38 DRAGENSnpHardQUAL DP=64;MQ=214.34;MQRankSum=-4.557;ReadPosRankSum=-2.994;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:56,8,0:0.125,0.000:64:25,3,0:31,5,0:8:42,0,47,147,147,147:112,0,255:40,0:8.3822e+00,6.8108e-01,5.0681e+01,1.4767e+02,1.8244e+02,1.5068e+02:0.00,34.77,37.78,34.77,69.54,37.78:24,32,1,7:33,23,4,4:79385857 chr2 79385858 . G . PASS END=79385865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,165,255:40,0 chr2 79385866 . C G, 0.40 DRAGENSnpHardQUAL DP=60;MQ=215.37;MQRankSum=-4.004;ReadPosRankSum=-3.043;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:54,6,0:0.100,0.000:60:24,2,0:30,4,0:11:25,0,47,147,147,147:47,0,255:40,0:4.0298e-01,1.0525e+01,6.0525e+01,1.5751e+02,1.9228e+02,1.6052e+02:0.00,34.77,37.78,34.77,69.54,37.78:24,30,0,6:24,30,4,2:79385857 chr2 79385867 . A . PASS END=79385888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:43:0,92,1562:0,92,255:40,0 chr2 79385889 . T . PASS END=79385889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:29:42:0,29,1094:0,29,255:34,0 chr2 79385890 . C . PASS END=79385894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:42:0,87,1436:0,87,255:37,0 chr2 79385895 . C . PASS END=79385895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 79386456 . C . PASS END=79386531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:87:36:0,87,1310:0,87,255:40,0 chr2 79750339 . A . PASS END=79750435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,130,255:40,0 chr2 79878678 . G . PASS END=79878784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:59:0,120,1800:0,151,255:40,0 chr2 79901095 . A G, 192.63 PASS DP=49;MQ=249.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,21,0:0,28,0:143:230,146,0,1782,146,1782:255,147,0:0,0:1.9263e+02,1.4263e+02,0.0000e+00,4.5000e+02,1.7740e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,19:0,0,22,27 chr2 79914690 . T . PASS END=79914722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,154,255:40,2 chr2 79971513 . G . PASS END=79971514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr2 79971515 . G . PASS END=79971515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 79971516 . A . PASS END=79971516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 79971517 . C . PASS END=79971708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:80:31:0,80,1141:0,80,255:40,3 chr2 80085139 . G . PASS END=80085201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,104,1284:0,104,255:40,0 chr2 80085202 . G . PASS END=80085238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:41:0,96,1584:0,96,255:40,0 chr2 80085239 . G A, 49.35 PASS DP=44;MQ=250.00;MQRankSum=5.645;ReadPosRankSum=0.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,20,0:0.455,0.000:44:10,7,0:14,13,0:48:84,0,50,707,830,1537:255,0,255:20,0:4.9349e+01,7.2222e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,17,8,12:11,13,11,9 chr2 80085240 . G . PASS END=80085276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1357:0,95,255:40,0 chr2 80085277 . T . PASS END=80085290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1288:0,92,255:33,0 chr2 80085291 . T . PASS END=80085291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:32,0 chr2 80085292 . C . PASS END=80085305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:33,0 chr2 80096942 . G . PASS END=80097061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:98:38:0,98,1357:0,98,255:40,0 chr2 80101202 . G . PASS END=80101203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 80101204 . G . PASS END=80101204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 80101205 . C . PASS END=80101211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 80101212 . A . PASS END=80101212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 80101213 . T . PASS END=80101217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 80101218 . A . PASS END=80101218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 80101219 . C . PASS END=80101221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:17,0 chr2 80101222 . T . PASS END=80101222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 80101223 . C . PASS END=80101270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,599:0,41,255:19,0 chr2 80101271 . A . PASS END=80101275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 80101276 . G . PASS END=80101292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1005:0,87,255:30,0 chr2 80101293 . C . PASS END=80101293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 80101294 . A . PASS END=80101394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1023:0,85,255:33,0 chr2 80101395 . C . PASS END=80101395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr2 80101396 . T . PASS END=80101412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 80101413 . A . PASS END=80101457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:26,0 chr2 80101458 . A . PASS END=80101468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:50:20:0,50,765:0,50,255:19,0 chr2 80136720 . A . PASS END=80136726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 80136727 . T . PASS END=80136727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,588:0,24,255:17,0 chr2 80136728 . T . PASS END=80136728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,649:0,41,255:18,0 chr2 80136729 . A . PASS END=80136732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 80136733 . T . PASS END=80136733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 80136734 . G . PASS END=80136734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 80136735 . G . PASS END=80136735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 80136736 . A . PASS END=80136745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,778:0,63,255:22,0 chr2 80136746 . G . PASS END=80136746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 80136747 . T . PASS END=80136751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 80136752 . C . PASS END=80136769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,50,255:19,0 chr2 80136770 . G . PASS END=80136770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr2 80136771 . T . PASS END=80136776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr2 80136777 . G . PASS END=80136790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr2 80136791 . G . PASS END=80136791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr2 80136792 . A . PASS END=80136805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr2 80136806 . C . PASS END=80136806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr2 80136807 . G . PASS END=80136807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 80136808 . C . PASS END=80136809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr2 80136810 . G . PASS END=80136810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 80136811 . C . PASS END=80136811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 80136812 . G . PASS END=80136866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr2 80136867 . G . PASS END=80136868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 80136869 . G . PASS END=80136872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 80136873 . A . PASS END=80136873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 80136874 . A . PASS END=80136887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 80136888 . G . PASS END=80136918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,590:0,48,255:19,0 chr2 80136919 . A . PASS END=80136923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:12,0 chr2 80529376 . T . PASS END=80529382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:25,0 chr2 80529383 . T . PASS END=80529400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:30,0 chr2 80529401 . T . PASS END=80529401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 80529402 . G . PASS END=80529407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 80529408 . G . PASS END=80529408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 80529409 . G . PASS END=80529413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 80529414 . T . PASS END=80529414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 80529415 . A . PASS END=80529430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr2 80529431 . T . PASS END=80529431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:28,0 chr2 80529432 . T . PASS END=80529465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1215:0,84,255:34,0 chr2 80529466 . T . PASS END=80529466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,799:0,67,255:26,0 chr2 80529467 . T . PASS END=80529475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:31,0 chr2 80529476 . A . PASS END=80529476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:27,0 chr2 80529477 . C . PASS END=80529480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 80529481 . G . PASS END=80529481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1047:0,38,255:26,0 chr2 80529482 . T . PASS END=80529483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 80529484 . T . PASS END=80529486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 80529487 . C . PASS END=80529487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 80529488 . T . PASS END=80529488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 80529489 . G . PASS END=80529490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 80529491 . G . PASS END=80529491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr2 80529492 . C . PASS END=80529495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,986:0,68,255:26,0 chr2 80529496 . C . PASS END=80529503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 80529504 . C . PASS END=80529517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,914:0,62,255:26,0 chr2 80529518 . G . PASS END=80529518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 80529519 . T . PASS END=80529535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1000:0,78,255:26,0 chr2 80529536 . T . PASS END=80529578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1086:0,86,255:33,0 chr2 80529579 . T . PASS END=80529579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr2 80529580 . G . PASS END=80529618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr2 80529619 . C . PASS END=80529626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,969:0,65,255:26,0 chr2 80529627 . G . PASS END=80529627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,906:0,26,255:24,0 chr2 80529628 . G . PASS END=80529646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr2 80529647 . A . PASS END=80529647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 80529648 . T . PASS END=80529650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 80529651 . T . PASS END=80529651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr2 80529652 . G . PASS END=80529652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 80529653 . C . PASS END=80529653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr2 80529654 . C . PASS END=80529654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 80529655 . C . PASS END=80529655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr2 80529656 . G . PASS END=80529659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 80529660 . C . PASS END=80529660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr2 80529661 . C . PASS END=80529667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 80529668 . T . PASS END=80529708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:18,0 chr2 80529709 . A . PASS END=80529710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 80529711 . C . PASS END=80529715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 80529716 . G . PASS END=80529716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 80529717 . T . PASS END=80529725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 80529726 . C . PASS END=80529726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 80529727 . G . PASS END=80529729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr2 80529730 . T . PASS END=80529730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 80529731 . G . PASS END=80529758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,629:0,41,255:19,0 chr2 80529759 . C . PASS END=80529759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 80529760 . C . PASS END=80529768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 80529769 . G . PASS END=80529769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 80529770 . G . PASS END=80529770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 80529771 . T . PASS END=80529771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 80529772 . G . PASS END=80529773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 80529774 . C . PASS END=80529774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 80529775 . C . PASS END=80529823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:19,0 chr2 80529824 . A . PASS END=80529825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 80529826 . G . PASS END=80529843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 80529844 . G . PASS END=80529854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 80529855 . C . PASS END=80529872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:19,0 chr2 80529873 . A . PASS END=80529877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 80529878 . G . PASS END=80529897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 80529898 . C . PASS END=80529913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,754:0,60,255:22,0 chr2 80529914 . C . PASS END=80529914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 80529915 . T . PASS END=80529945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr2 80529946 . C . PASS END=80529947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 80529948 . G . PASS END=80529953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr2 80529954 . T . PASS END=80529955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr2 80529956 . T . PASS END=80529976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,930:0,62,255:26,0 chr2 80529977 . C . PASS END=80529977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 80529978 . A . PASS END=80529996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,953:0,62,255:26,0 chr2 80529997 . C . PASS END=80529997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr2 80529998 . C . PASS END=80530039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,921:0,62,255:26,0 chr2 80530040 . G . PASS END=80530042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 80530043 . T . PASS END=80530043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:26,0 chr2 80530044 . T . PASS END=80530045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 80530046 . A . PASS END=80530053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 80530054 . G . PASS END=80530058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 80530059 . C . PASS END=80530060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 80530061 . A . PASS END=80530062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 80530063 . G . PASS END=80530088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,947:0,68,255:26,0 chr2 80530089 . G . PASS END=80530092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 80530093 . G . PASS END=80530093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 80530094 . G . PASS END=80530099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 80530100 . A . PASS END=80530100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr2 80530101 . G . PASS END=80530107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 80530108 . C . PASS END=80530127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:26,0 chr2 80530128 . G . PASS END=80530128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:21,0 chr2 80530129 . C . PASS END=80530130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:21,0 chr2 80530131 . C . PASS END=80530173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,779:0,63,255:24,0 chr2 80530174 . G . PASS END=80530174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 80530175 . T . PASS END=80530180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 80530181 . A . PASS END=80530181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:21,0 chr2 80530182 . C . PASS END=80530195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 80530196 . C . PASS END=80530211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,648:0,46,255:19,0 chr2 80530212 . C . PASS END=80530219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr2 80530220 . C . PASS END=80530220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 80530221 . T . PASS END=80530222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 80530223 . C . PASS END=80530223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 80530224 . G . PASS END=80530224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 80530225 . C . PASS END=80530225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 80530226 . A . PASS END=80530237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,795:0,66,255:23,0 chr2 80530238 . T . PASS END=80530238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 80530239 . G . PASS END=80530242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 80530243 . G . PASS END=80530258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,668:0,43,255:19,0 chr2 80530259 . A . PASS END=80530259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:18,0 chr2 80530260 . A . PASS END=80530264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:18,0 chr2 80530265 . G . PASS END=80530270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 80530271 . T . PASS END=80530272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,638:0,46,255:20,0 chr2 80530273 . C . PASS END=80530273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 80530274 . A . PASS END=80530274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 80530275 . C . PASS END=80530282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 80530283 . A . PASS END=80530283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr2 80530284 . A . PASS END=80530291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr2 80530292 . T . PASS END=80530292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr2 80530293 . G . PASS END=80530305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:23,0 chr2 80530306 . C . PASS END=80530306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr2 80530307 . T . PASS END=80530322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:21,0 chr2 80530323 . A . PASS END=80530323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 80530324 . G . PASS END=80530328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr2 80530329 . C . PASS END=80530329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 80530330 . G . PASS END=80530331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr2 80530332 . A . PASS END=80530332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 80530333 . A . PASS END=80530347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 80530348 . A . PASS END=80530348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:18,0 chr2 80530349 . C . PASS END=80530357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,601:0,46,255:19,0 chr2 80530358 . T . PASS END=80530395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr2 80530396 . G . PASS END=80530403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 80530404 . A . PASS END=80530405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr2 80530406 . A . PASS END=80530406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:12,0 chr2 80530407 . T . PASS END=80530414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 80530415 . G . PASS END=80530415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 80530416 . G . PASS END=80530416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:13,0 chr2 80530417 . C . PASS END=80530447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,507:0,41,255:17,0 chr2 80530448 . A . PASS END=80530448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 80530449 . G . PASS END=80530451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 80530452 . T . PASS END=80530452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 80530453 . G . PASS END=80530459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 80530460 . T . PASS END=80530460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 80530461 . T . PASS END=80530465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 80530466 . A . PASS END=80530466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 80530467 . G . PASS END=80530468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:15,0 chr2 80530469 . C . PASS END=80530469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 80530470 . C . PASS END=80530487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:18,0 chr2 80530488 . C . PASS END=80530488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr2 80530489 . G . PASS END=80530497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,629:0,54,255:19,0 chr2 80530498 . C . PASS END=80530498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr2 80530499 . A . PASS END=80530500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 80530501 . C . PASS END=80530501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr2 80530502 . T . PASS END=80530524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,737:0,60,255:26,0 chr2 80530525 . G . PASS END=80530531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:30,0 chr2 80530532 . T . PASS END=80530532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 80530533 . T . PASS END=80530533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 80530534 . G . PASS END=80530546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,77,255:26,0 chr2 80530547 . A . PASS END=80530550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1124:0,87,255:29,0 chr2 80530551 . T . PASS END=80530557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 80530558 . G . PASS END=80530560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 80530561 . C . PASS END=80530636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,909:0,62,255:26,0 chr2 80530637 . G . PASS END=80530639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 80530640 . C . PASS END=80530669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:26,0 chr2 80530670 . G . PASS END=80530670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 80530671 . T . PASS END=80530673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 80530674 . G . PASS END=80530680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 80530681 . T . PASS END=80530681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:18,0 chr2 80530682 . A . PASS END=80530691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 80530692 . A . PASS END=80530742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:19,0 chr2 80530743 . G . PASS END=80530764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,466:0,39,255:13,0 chr2 80530765 . C . LowGQ END=80530765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr2 80530766 . G . PASS END=80530771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 80530772 . G . PASS END=80530774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 80530775 . A . PASS END=80530783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 80530784 . G . PASS END=80530784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:9,0 chr2 80530785 . C . PASS END=80530818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,313:0,30,255:12,0 chr2 80530819 . C . PASS END=80530819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 80530820 . A . PASS END=80530828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,337:0,33,255:11,0 chr2 80530829 . C . PASS END=80530829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 80530830 . A . PASS END=80530856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,449:0,36,255:13,0 chr2 80530857 . G . PASS END=80530862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 80530863 . A . PASS END=80530863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 80530864 . G . PASS END=80530867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 80530868 . C . PASS END=80530869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 80530870 . C . PASS END=80530901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr2 80530902 . T . PASS END=80530902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 80530903 . C . PASS END=80530908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr2 80530909 . C . PASS END=80530916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 80530917 . G . PASS END=80530930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 80530931 . A . PASS END=80530943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:12,0 chr2 80530944 . T . PASS END=80530944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 80540687 . A . PASS END=80540779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:48:0,105,1575:0,106,255:40,0 chr2 80555424 . A . PASS END=80555474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,119,1800:0,119,255:40,0 chr2 80620336 . A . PASS END=80620416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:67:0,120,1800:0,201,255:40,0 chr2 80646574 . C . PASS END=80646576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 80646577 . C . PASS END=80646577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 80646578 . G . PASS END=80646581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1149:0,90,255:31,0 chr2 80646582 . A . PASS END=80646582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 80646583 . G . PASS END=80646726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:89:35:0,89,1225:0,89,255:40,0 chr2 80772107 . G . PASS END=80772199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:72:0,120,1800:0,183,255:40,0 chr2 80773032 . G . PASS END=80773188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:31:0,80,1215:0,80,255:40,0 chr2 80782818 . A . PASS END=80782820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 80782821 . A . PASS END=80782821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 80782822 . T . PASS END=80782826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 80782827 . T . PASS END=80782827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 80782828 . C . PASS END=80782835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 80782836 . A . PASS END=80782836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr2 80782837 . T . PASS END=80782843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 80782844 . A . PASS END=80782845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,557:0,32,255:15,0 chr2 80782846 . G . PASS END=80782880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:21,0 chr2 80782881 . C . PASS END=80782889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:24,0 chr2 80782890 . G . PASS END=80782890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:24,0 chr2 80782891 . G . PASS END=80782894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 80782895 . G . PASS END=80782979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1102:0,87,255:37,0 chr2 80782980 . A . PASS END=80782998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:25:0,75,917:0,75,255:25,0 chr2 80782999 . A . PASS END=80782999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr2 80783000 . A . PASS END=80783003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 80783004 . T . PASS END=80783004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 80783005 . G . PASS END=80783011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 80783012 . G . PASS END=80783012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 80783013 . A . PASS END=80783016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 80783017 . A . PASS END=80783018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr2 80801288 . T . PASS END=80801288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 80801289 . G . PASS END=80801308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1235:0,96,255:39,0 chr2 80801309 . A . PASS END=80801314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,107,1488:0,107,255:39,0 chr2 80801315 . A . PASS END=80801315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1317:0,73,255:36,0 chr2 80801316 . G . PASS END=80801345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:39:0,94,1425:0,94,255:40,0 chr2 80801346 . T C, 48.63 PASS DP=45;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=0.126;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:11,8,0:15,11,0:46:83,0,47,183,183,183:255,0,255:25,0:4.8633e+01,1.0303e-04,5.0000e+01,1.8340e+02,2.1817e+02,1.8641e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,15,7,12:14,12,10,9 chr2 80801347 . C . PASS END=80801383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,104,1426:0,104,255:40,0 chr2 80801384 . C . PASS END=80801430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,89,255:40,0 chr2 80801431 . A . PASS END=80801439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:26,0 chr2 80808831 . A . PASS END=80808857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,130,255:40,0 chr2 80808858 . G . PASS END=80808933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,99,1485:0,116,255:40,0 chr2 80808934 . A . PASS END=80808944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:34:0,69,1035:0,69,255:26,0 chr2 80816429 . G . PASS END=80816610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:41:0,105,1575:0,107,255:40,0 chr2 80831199 . A . PASS END=80831302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:94:51:0,94,1773:0,94,255:40,0 chr2 80831303 . A . PASS END=80831303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,6:53:59:53:0,59,1499:0,59,255:35,0 chr2 80831304 . G . PASS END=80831304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 80835309 . T . PASS END=80835443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:86:35:0,86,1290:0,86,255:40,0 chr2 80846210 . A . PASS END=80846226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:32:0,93,1291:0,96,255:36,0 chr2 80846227 . T . PASS END=80846227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1235:0,78,255:35,0 chr2 80846228 . T . PASS END=80846230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1285:0,114,255:38,0 chr2 80846231 . A . PASS END=80846231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1356:0,76,255:37,0 chr2 80846232 . C . PASS END=80846352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:36:0,90,1324:0,90,255:40,0 chr2 80846353 . G . PASS END=80846353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:31,0 chr2 80859197 . G . PASS END=80859253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,171,255:40,0 chr2 80859775 . G . PASS END=80859787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,984:0,68,255:29,0 chr2 80859788 . C . PASS END=80859876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1163:0,80,255:40,0 chr2 80874710 . C . PASS END=80874939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1147:0,80,255:40,0 chr2 80874940 . G . PASS END=80874940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:29,0 chr2 80874941 . A . PASS END=80874949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1133:0,82,255:31,0 chr2 80874950 . T . PASS END=80874969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,65,255:28,0 chr2 80874970 . T . PASS END=80874997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:20:0,44,654:0,44,255:21,0 chr2 84650652 . T . PASS END=84650652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 84650744 . C . PASS END=84650744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 84650832 . G . PASS END=84650832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:81:0,120,1800:0,227,255:40,0 chr2 84650856 . A . PASS END=84650856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,6:81:41:81:0,41,2576:0,41,255:40,5 chr2 84650870 . T . PASS END=84650896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,222,255:40,0 chr2 84652539 . C . PASS END=84652549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr2 84652550 . T . PASS END=84652550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 84652551 . G . PASS END=84652559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:22:0,63,945:0,65,255:26,0 chr2 84652560 . C . PASS END=84652727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:27:0,81,1031:0,81,255:40,0 chr2 84658631 . C . PASS END=84658783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:40:0,99,1485:0,107,255:40,0 chr2 84660476 . C . PASS END=84660559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:50:0,117,1755:0,134,255:40,0 chr2 84660565 . C . PASS END=84660565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 84663205 . T . PASS END=84663211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,916:0,81,255:28,0 chr2 84663212 . T . PASS END=84663212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 84663213 . T . PASS END=84663218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 84663219 . T . PASS END=84663219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 84663220 . C . PASS END=84663222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 84663223 . G . PASS END=84663223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 84663224 . A . PASS END=84663227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 84663228 . C . PASS END=84663230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 84663231 . G . PASS END=84663232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 84663233 . C . PASS END=84663233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:27,0 chr2 84663234 . A . PASS END=84663248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 84663249 . A . PASS END=84663249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:26,0 chr2 84663250 . T . PASS END=84663250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 84663251 . A . PASS END=84663251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr2 84668171 . C . PASS END=84668213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,153,255:40,0 chr2 84668214 . T . PASS END=84668228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:63:0,120,1800:0,159,255:40,0 chr2 84668371 . A . PASS END=84668569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:34:0,81,1215:0,92,255:40,0 chr2 84668570 . G . PASS END=84668583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:25:0,72,953:0,75,255:25,0 chr2 84668591 . A . PASS END=84668591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 84670408 . C . PASS END=84670412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr2 84670413 . T . PASS END=84670413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1139:0,66,255:31,0 chr2 84670414 . C . PASS END=84670524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:32:0,93,1143:0,93,255:40,0 chr2 84670527 . G . PASS END=84670528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,111,255:31,0 chr2 84676053 . T . PASS END=84676071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,122,255:40,0 chr2 84676765 . A . PASS END=84676765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1344:0,111,255:37,0 chr2 84676772 . C . PASS END=84676839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,119,1607:0,119,255:40,0 chr2 84676840 . G . PASS END=84676846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,137,255:40,0 chr2 84676847 . A . PASS END=84676847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,5:62:45:62:0,45,2008:0,45,255:40,0 chr2 84676848 . G . PASS END=84676849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:84:62:0,84,1800:0,84,255:40,0 chr2 84676850 . A . PASS END=84676850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,4:62:75:62:0,75,1964:0,75,255:40,0 chr2 84676851 . A . PASS END=84676851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:99:62:0,120,1800:0,137,255:39,0 chr2 84676852 . C . PASS END=84676852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:58:61:0,58,1956:0,58,255:39,0 chr2 84676853 . A . PASS END=84676855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:57:0,111,1665:0,116,255:38,0 chr2 84676856 . G . PASS END=84676856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:55:57:0,55,1850:0,55,255:32,0 chr2 84676857 . C . PASS END=84676857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:85:57:0,85,1797:0,85,255:31,0 chr2 84676858 . C . PASS END=84676859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:64:57:0,64,1856:0,64,255:31,0 chr2 84676860 . A . PASS END=84676860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:90:57:0,90,1350:0,122,255:27,0 chr2 84676861 . A . PASS END=84676861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:49:58:0,49,1894:0,49,255:27,0 chr2 84676862 . T . PASS END=84676866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,3:58:80:55:0,80,1260:0,80,255:27,0 chr2 84676867 . T . PASS END=84676869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:69:55:0,69,1035:0,76,255:24,0 chr2 84676870 . T . PASS END=84676870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:54:51:0,54,1541:0,54,255:18,0 chr2 84676871 . G . PASS END=84676871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:60:51:0,60,900:0,81,255:17,0 chr2 84676872 . C . PASS END=84676872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:34:51:0,34,1492:0,34,255:11,0 chr2 84676873 . G . PASS END=84676875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:42:51:0,42,630:0,58,255:12,0 chr2 84676876 . A . PASS END=84676876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:39:51:0,39,585:0,75,255:10,0 chr2 84676883 . G . PASS END=84676883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:15:43:0,15,225:0,34,255:2,0 chr2 84676886 . TAAAAAAA TAAAA,TAA,TAAA,TAAAAA,TA,T, 161.76 PASS DP=35;MQ=248.41;FractionInformativeReads=0.971 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,11,7,5,4,6,1,0:0.324,0.206,0.147,0.118,0.176,0.029,0.000:34:0,6,1,3,1,4,1,0:0,5,6,2,3,2,0,0:17:169,130,49,119,4,56,117,28,44,52,233,80,40,59,92,179,23,111,64,71,75,244,48,133,83,108,231,100,92,0,18,13,38,47,69,8:255,0,207:1,45:1.6176e+02,1.2461e+02,4.6136e+01,1.1362e+02,7.9378e-02,5.3079e+01,1.1176e+02,2.4494e+01,4.0568e+01,4.8802e+01,2.2686e+02,7.6533e+01,3.6109e+01,5.5031e+01,8.9109e+01,1.7282e+02,1.8969e+01,1.0778e+02,5.9967e+01,6.7050e+01,7.1969e+01,2.3797e+02,4.3917e+01,1.2885e+02,7.8915e+01,1.0413e+02,2.2758e+02,9.6917e+01,1.1880e+02,2.9066e+01,4.7126e+01,4.2451e+01,6.7306e+01,7.6497e+01,9.8128e+01,3.8488e+01:0.00,2.00,5.00,2.00,4.00,5.00,2.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,4.00,5.00,34.77,36.77,36.77,36.77,36.77,36.77,36.77,37.77:0,0,18,16:0,0,20,14 chr2 84676890 . A . LowGQ END=84676890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:15,38:53:0:53:0,0,0:255,0,255:16,26 chr2 84686294 . C . PASS END=84686294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 84686297 . G . PASS END=84686303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 84686304 . G . PASS END=84686304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 84686305 . C . PASS END=84686305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,515:0,12,255:16,0 chr2 84686306 . T . PASS END=84686333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,599:0,41,255:19,0 chr2 84686334 . G . PASS END=84686334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 84686335 . C . PASS END=84686338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 84686339 . T . PASS END=84686339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 84686340 . G . PASS END=84686343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr2 84686344 . C . PASS END=84686344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr2 84686345 . C . PASS END=84686359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 84686360 . C . PASS END=84686372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,674:0,44,255:19,0 chr2 84686373 . A . PASS END=84686376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 84686377 . G . PASS END=84686377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 84686378 . C . PASS END=84686378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 84686379 . A . PASS END=84686382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,782:0,50,255:19,0 chr2 84686383 . G . PASS END=84686384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 84686385 . T . PASS END=84686388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 84686389 . G . PASS END=84686393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 84686464 . C . PASS END=84686464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 84686500 . T . PASS END=84686500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 84686543 . A . PASS END=84686543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 84686579 . C . PASS END=84686579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 84744951 . A . PASS END=84745175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:87:57:0,87,1755:0,87,255:40,0 chr2 84752689 . C . PASS END=84752862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:96:38:0,96,1440:0,103,255:40,0 chr2 84754909 . A . PASS END=84754917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:95:0,120,1800:0,255,255:40,0 chr2 84756028 . A . PASS END=84756028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,873:0,81,255:27,0 chr2 84756029 . T . PASS END=84756029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 84756030 . T . PASS END=84756030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 84756031 . C . PASS END=84756043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:26:0,60,1008:0,60,255:29,0 chr2 84756044 . T . PASS END=84756044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 84756045 . T . PASS END=84756045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr2 84756046 . G . PASS END=84756048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 84756049 . G A, 135.45 PASS DP=31;MQ=250.00;FractionInformativeReads=0.968 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,16,0:0,14,0:85:173,88,0,1012,88,1012:255,99,0:0,0:1.3545e+02,8.5445e+01,0.0000e+00,4.5000e+02,1.2022e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,14:0,0,18,12 chr2 84756050 . T . PASS END=84756057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1196:0,85,255:35,0 chr2 84756058 . C . PASS END=84756058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:33,0 chr2 84756059 . C . PASS END=84756060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 84756061 . T . PASS END=84756061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:35,0 chr2 84756062 . C . PASS END=84756062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1355:0,95,255:34,0 chr2 84756063 . T . PASS END=84756063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1262:0,64,255:33,0 chr2 84756064 . C . PASS END=84756086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:38:0,96,1266:0,96,255:40,0 chr2 84756087 . T . PASS END=84756259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:81:40:0,81,1215:0,111,255:40,0 chr2 84756260 . C . PASS END=84756272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,70,255:26,0 chr2 84756273 . T . PASS END=84756273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 84756274 . G . PASS END=84756275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 84756276 . T . PASS END=84756287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,44,255:18,0 chr2 84756288 . A . PASS END=84756288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:13,0 chr2 84756289 . A . PASS END=84756290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 84771357 . A . PASS END=84771442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:35:0,102,1496:0,105,255:40,0 chr2 84771443 . A . PASS END=84771479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,178,255:40,0 chr2 84771480 . G A, 275.73 PASS DP=76;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,76,0:1.000,0.000:76:0,38,0:0,38,0:226:314,229,0,2908,229,2908:255,229,0:0,0:2.7573e+02,2.2573e+02,0.0000e+00,4.5000e+02,2.6050e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,48,28:0,0,32,44 chr2 84771481 . T . PASS END=84771519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,177,255:40,0 chr2 84771520 . T . PASS END=84771527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 84771528 . A . PASS END=84771566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,144,255:40,0 chr2 84771567 . C T, 218.55 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,26,0:0,31,0:169:256,172,0,2194,172,2194:255,171,0:0,0:2.1855e+02,1.6855e+02,0.0000e+00,4.5000e+02,2.0332e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,33:0,0,33,24 chr2 84771568 . A . PASS END=84771604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,128,255:40,0 chr2 84771605 . A . PASS END=84771624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:38:0,87,1305:0,114,255:40,0 chr2 84774392 . C . PASS END=84774526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,134,255:40,0 chr2 84774616 . G . PASS END=84774732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:85:41:0,85,1350:0,85,255:40,0 chr2 84774733 . G . PASS END=84774736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:37:0,75,1125:0,84,255:25,0 chr2 84775412 . A . PASS END=84775541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:47:0,109,1755:0,109,255:40,1 chr2 84777013 . C . PASS END=84777015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:24,0 chr2 84777016 . T . PASS END=84777016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr2 84777017 . A . PASS END=84777027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr2 84777028 . C . PASS END=84777174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:27:0,81,942:0,81,255:40,0 chr2 84777175 . T . PASS END=84777175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr2 84777176 . A . PASS END=84777179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1308:0,92,255:35,0 chr2 84777180 . A . PASS END=84777180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1207:0,75,255:30,0 chr2 84777181 . G . PASS END=84777181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 84780042 . G . PASS END=84780150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,105,1575:0,112,255:40,0 chr2 84780151 . A . PASS END=84780151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1356:0,65,255:31,0 chr2 84780152 . C . PASS END=84780158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:32,0 chr2 84784859 . G . LowGQ END=84784859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:0:33:0,0,998:11,0,255:29,0 chr2 84784860 . A . PASS END=84784860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,956:0,27,255:29,0 chr2 84784861 . T . PASS END=84784862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,995:0,41,255:30,0 chr2 84784863 . G . PASS END=84784863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:28:38:0,28,1271:0,28,255:35,0 chr2 84784864 . T . PASS END=84784864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:36,0 chr2 84784865 . A . PASS END=84784865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1247:0,50,255:34,0 chr2 84784866 . T . PASS END=84784868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1296:0,94,255:36,0 chr2 84784869 . T . PASS END=84784869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr2 84784870 . G . PASS END=84784871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,114,1710:0,117,255:40,0 chr2 84784872 . G . PASS END=84784872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1376:0,54,255:39,0 chr2 84784873 . T . PASS END=84785059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:80:41:0,80,1407:0,80,255:40,0 chr2 84800591 . G . PASS END=84800604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,99,1511:0,99,255:40,0 chr2 84800605 . C A, 181.96 PASS DP=46;MQ=250.00;FractionInformativeReads=0.978 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,25,0:0,20,0:132:220,135,0,1692,135,1692:255,138,0:0,0:1.8196e+02,1.3196e+02,0.0000e+00,4.5000e+02,1.6673e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,14:0,0,25,20 chr2 84800606 . G . PASS END=84800642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:48:0,120,1800:0,135,255:40,0 chr2 84800643 . A . PASS END=84800711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,161,255:40,0 chr2 84804381 . A . PASS END=84804532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,142,255:40,0 chr2 84806651 . G . PASS END=84806803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:42:0,105,1575:0,126,255:40,0 chr2 84811123 . A . PASS END=84811131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:31,0 chr2 84811132 . C . PASS END=84811132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 84811133 . T . PASS END=84811374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:32:0,90,1158:0,96,255:40,0 chr2 84815950 . G . PASS END=84816078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,119,1667:0,119,255:40,0 chr2 84821096 . G . PASS END=84821209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:96:45:0,96,1440:0,134,255:40,0 chr2 84822770 . T . PASS END=84822882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:29:0,80,1017:0,80,255:40,1 chr2 84822883 . C . PASS END=84822909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:26,0 chr2 84822910 . A . PASS END=84822913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 84831463 . C . PASS END=84831463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr2 84831464 . T . PASS END=84831472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:29,0 chr2 84831473 . T . PASS END=84831473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 84831474 . C . PASS END=84831476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 84831477 . T . PASS END=84831477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:27,0 chr2 84831478 . G . PASS END=84831480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr2 84831481 . T . PASS END=84831481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,947:0,54,255:27,0 chr2 84831482 . T . PASS END=84831547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1109:0,80,255:40,0 chr2 84831548 . T . PASS END=84831548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1442:0,74,255:39,0 chr2 84831549 . G . PASS END=84831597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1305:0,88,255:40,0 chr2 84831598 . T . PASS END=84831598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr2 84831599 . T . PASS END=84831613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:31,0 chr2 84831614 . A . PASS END=84831614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 84831615 . A . PASS END=84831619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1202:0,96,255:32,0 chr2 84831620 . A . PASS END=84831633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,90,255:22,0 chr2 84831634 . C . PASS END=84831659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,50,255:18,0 chr2 84831660 . A . PASS END=84831660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 84831661 . G . PASS END=84831666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 84831667 . C . PASS END=84831667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 84831668 . T . PASS END=84831671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 84831672 . A . PASS END=84831672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 84831673 . A . PASS END=84831673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 84831674 . A . PASS END=84831674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:15,0 chr2 84831675 . G . PASS END=84831675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 84832624 . G . PASS END=84832716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:42:0,99,1485:0,125,255:40,0 chr2 84834100 . G . PASS END=84834100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 84834101 . T . PASS END=84834199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,107,1458:0,107,255:40,0 chr2 84834200 . C . PASS END=84834219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,107,1466:0,107,255:40,0 chr2 84838798 . G . PASS END=84838805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr2 84838806 . G . PASS END=84838816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr2 84838817 . A . PASS END=84838821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 84838822 . A . PASS END=84838822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:17,0 chr2 84838823 . A . PASS END=84838827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,751:0,50,255:18,0 chr2 84838828 . C . PASS END=84838832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:65:23:0,65,817:0,65,255:26,0 chr2 84838833 . C . PASS END=84838841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 84838842 . T . PASS END=84838842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 84838843 . A . PASS END=84838895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1215:0,84,255:39,0 chr2 84838896 . C . PASS END=84838896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr2 84838897 . C . PASS END=84838961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1305:0,92,255:39,0 chr2 84838962 . A . PASS END=84838978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:26,0 chr2 84844010 . G . PASS END=84844106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,167,255:40,0 chr2 84846809 . G . PASS END=84846978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:32:0,83,1180:0,83,255:40,0 chr2 84846979 . A . PASS END=84846979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:30,0 chr2 84846980 . G . PASS END=84847000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr2 84847001 . A . PASS END=84847001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 84847002 . G . PASS END=84847005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 84847006 . T . PASS END=84847016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:25,0 chr2 84847017 . G . PASS END=84847028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:45:24:0,45,675:0,62,255:18,0 chr2 84848315 . G . PASS END=84848315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 84848316 . T . PASS END=84848316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 84848317 . T . PASS END=84848479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:31:0,84,1266:0,84,255:40,0 chr2 84848562 . G . PASS END=84848675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:87:51:0,87,1707:0,87,255:40,0 chr2 84851389 . A . PASS END=84851514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:53:0,120,1800:0,155,255:40,0 chr2 84851589 . G . PASS END=84851744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,105,1575:0,119,255:40,0 chr2 84852026 . G . PASS END=84852029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 84852030 . G . PASS END=84852030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 84852031 . C . PASS END=84852146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1147:0,80,255:40,0 chr2 84852147 . A . PASS END=84852147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:26,0 chr2 84852148 . G . PASS END=84852149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1177:0,80,255:27,0 chr2 84852150 . G . PASS END=84852152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 84852153 . T . PASS END=84852160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:27:0,57,855:0,81,255:19,0 chr2 84852161 . A . PASS END=84852161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 84852162 . A . PASS END=84852185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr2 84852186 . A . PASS END=84852187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:17:0,33,495:0,51,255:11,0 chr2 84861628 . A . PASS END=84861631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 84861632 . T . PASS END=84861632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 84861633 . G . PASS END=84861638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:26,0 chr2 84861639 . C . PASS END=84861640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 84861641 . T . PASS END=84861641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 84861642 . C . PASS END=84861750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1202:0,90,255:40,0 chr2 84861751 . G . PASS END=84861751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:28,0 chr2 84861752 . C . PASS END=84861759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1119:0,90,255:30,0 chr2 84861760 . G . PASS END=84861760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 84861761 . C . PASS END=84861763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr2 84861764 . A . PASS END=84861765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 84864334 . C . PASS END=84864335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,856:0,61,255:26,0 chr2 84864336 . C . PASS END=84864336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr2 84864337 . T . PASS END=84864337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 84864338 . C . PASS END=84864339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 84864340 . A . PASS END=84864340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 84864341 . G . PASS END=84864341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,996:0,51,255:28,0 chr2 84864342 . A . PASS END=84864342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,920:0,62,255:28,0 chr2 84864343 . T . PASS END=84864345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 84864346 . A . PASS END=84864346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:45:31:0,45,879:0,45,255:26,0 chr2 84864347 . T . PASS END=84864357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1280:0,81,255:37,0 chr2 84864358 . C . PASS END=84864358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1194:0,64,255:34,0 chr2 84864359 . G . PASS END=84864438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:38:0,98,1251:0,98,255:40,0 chr2 84864439 . A . PASS END=84864439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:79:55:0,79,1803:0,79,255:40,0 chr2 84864440 . A . PASS END=84864501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:38:0,84,1260:0,100,255:40,0 chr2 84867554 . G . PASS END=84867702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:37:0,81,1316:0,81,255:40,0 chr2 84869071 . A . PASS END=84869178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:43:0,119,1621:0,119,255:40,0 chr2 84880443 . T . PASS END=84880998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,125,255:40,0 chr2 84881784 . G . PASS END=84881906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1148:0,80,255:40,0 chr2 84885416 . C . PASS END=84885595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:86:32:0,86,1164:0,86,255:40,0 chr2 84885596 . A . PASS END=84885598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,80,255:24,0 chr2 84886150 . G . PASS END=84886293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:54:0,120,1800:0,146,255:40,0 chr2 84896413 . C . PASS END=84896433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,790:0,63,255:26,0 chr2 84896434 . T . PASS END=84896445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:29,0 chr2 84896446 . A . PASS END=84896446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:28,0 chr2 84896447 . T . PASS END=84896457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr2 84896458 . A . PASS END=84896458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 84896459 . C . PASS END=84896463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1142:0,99,255:33,0 chr2 84896464 . C . PASS END=84896464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr2 84896465 . G . PASS END=84896491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:33,0 chr2 84896492 . C . PASS END=84896496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:30:0,78,1170:0,80,255:26,0 chr2 84896497 . T . PASS END=84896587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1127:0,80,255:35,0 chr2 84896588 . C . PASS END=84896593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 84896594 . A . PASS END=84896594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 84896595 . G . PASS END=84896615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,953:0,62,255:26,0 chr2 84896616 . A . PASS END=84896616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:19,0 chr2 84896617 . A . PASS END=84896617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 84896618 . T . PASS END=84896618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 84896619 . A . PASS END=84896619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 84896620 . A . PASS END=84896634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:18,0 chr2 84897452 . T . PASS END=84897479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,107,1800:0,107,255:40,0 chr2 84897480 . A . PASS END=84897516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,134,255:40,0 chr2 84897517 . A G, 241.70 PASS DP=65;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,65,0:1.000,0.000:65:0,30,0:0,35,0:192:279,195,0,2438,195,2438:255,195,0:0,0:2.4170e+02,1.9170e+02,0.0000e+00,4.5000e+02,2.2647e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,33:0,0,35,30 chr2 84897518 . A . PASS END=84897554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,165,255:40,0 chr2 84897555 . A . PASS END=84897599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:39:0,87,1259:0,87,255:40,0 chr2 84899451 . G . PASS END=84899457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 84899458 . G . PASS END=84899458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr2 84899459 . G . PASS END=84899466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1050:0,93,255:31,0 chr2 84899467 . A . PASS END=84899467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:43:33:0,43,944:0,43,255:29,0 chr2 84899468 . C . PASS END=84899485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1082:0,82,255:32,0 chr2 84899486 . G . PASS END=84899486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:31,0 chr2 84899487 . A . PASS END=84899491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:36,0 chr2 84899492 . T . PASS END=84899492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:33,0 chr2 84899493 . T . PASS END=84899608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:37:0,95,1440:0,95,255:40,0 chr2 84904129 . G . PASS END=84904260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1260:0,90,255:40,0 chr2 84906115 . C . PASS END=84906198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:42:0,94,1446:0,94,255:40,0 chr2 84908481 . G . PASS END=84908490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr2 84908491 . A . PASS END=84908491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 84908492 . T . PASS END=84908496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 84908497 . T . PASS END=84908497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 84908498 . C . PASS END=84908505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 84908506 . A . PASS END=84908508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,986:0,67,255:28,0 chr2 84908509 . T . PASS END=84908512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 84908513 . A . PASS END=84908513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 84908514 . C . PASS END=84908528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:32,0 chr2 84908529 . A . PASS END=84908529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:18:33:0,18,931:0,18,255:29,0 chr2 84908530 . C . PASS END=84908612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1186:0,89,255:36,0 chr2 84908613 . T . PASS END=84908633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr2 84908634 . T . PASS END=84908634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:19,0 chr2 84908635 . T . PASS END=84908642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 84908643 . T . PASS END=84908652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr2 84912450 . G . PASS END=84912594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:35:0,80,1320:0,80,255:40,0 chr2 84912595 . C . PASS END=84912596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr2 84913608 . A . PASS END=84913681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:90:0,120,1800:0,206,255:40,2 chr2 84915563 . T . PASS END=84915717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:42:0,120,1800:0,126,255:40,0 chr2 84921373 . G . PASS END=84921379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:32,0 chr2 84921380 . C . PASS END=84921380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:31,0 chr2 84921381 . G . PASS END=84921385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:32:0,89,1233:0,89,255:35,0 chr2 84921386 . A . PASS END=84921386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1117:0,72,255:33,0 chr2 84921387 . T . PASS END=84921387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1303:0,105,255:35,0 chr2 84921388 . A . PASS END=84921388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1047:0,66,255:34,0 chr2 84921389 . C . PASS END=84921604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:80:37:0,80,1078:0,80,255:40,0 chr2 84924699 . A . PASS END=84924851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:37:0,111,1389:0,111,255:40,0 chr2 84926718 . G . PASS END=84926731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,507:0,45,255:19,0 chr2 84926732 . T . PASS END=84926739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 84926740 . A . PASS END=84926741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 84926742 . G . PASS END=84926751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 84926752 . A . PASS END=84926752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr2 84926753 . G . PASS END=84926765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,889:0,67,255:26,0 chr2 84926766 . C . PASS END=84926766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 84926767 . T . PASS END=84926767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 84926768 . C . PASS END=84926771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1027:0,84,255:29,0 chr2 84926772 . A . PASS END=84926772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 84926773 . T . PASS END=84926796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1117:0,80,255:33,0 chr2 84926797 . G . PASS END=84926797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr2 84926798 . G . PASS END=84926846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1150:0,80,255:33,0 chr2 84926847 . T . PASS END=84926858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:23,0 chr2 84928221 . T . PASS END=84928222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 84928223 . G . PASS END=84928232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1139:0,80,255:34,0 chr2 84928233 . G . PASS END=84928233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:33,0 chr2 84928234 . C . PASS END=84928237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1221:0,91,255:35,0 chr2 84928238 . T . PASS END=84928238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:33,0 chr2 84928239 . C . PASS END=84928243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1280:0,105,255:35,0 chr2 84928244 . T . PASS END=84928246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1209:0,66,255:35,0 chr2 84928247 . G . PASS END=84928375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:33:0,80,1257:0,80,255:40,0 chr2 84928376 . G . PASS END=84928376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 84928377 . C . PASS END=84928387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:29,0 chr2 84928388 . G . PASS END=84928388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr2 84928389 . A . PASS END=84928398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr2 84928399 . C . PASS END=84928413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,962:0,67,255:25,0 chr2 84928414 . T . PASS END=84928414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:22,0 chr2 84928415 . C . PASS END=84928415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 84928416 . A . PASS END=84928416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 84928417 . A . PASS END=84928419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr2 84928420 . T . PASS END=84928420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:25,0 chr2 84928421 . T . PASS END=84928428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,939:0,78,255:26,0 chr2 84928429 . C . PASS END=84928429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:21,0 chr2 84928430 . T . PASS END=84928445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 84928446 . A . PASS END=84928446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,737:0,17,255:19,0 chr2 84928447 . G . PASS END=84928449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 84928450 . A . PASS END=84928457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,723:0,49,255:19,0 chr2 84928458 . A . PASS END=84928458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:18,0 chr2 84928459 . T . PASS END=84928460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 84928461 . T . PASS END=84928462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 84928463 . A . PASS END=84928463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:18,0 chr2 84930519 . G . PASS END=84930686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:34:0,96,1235:0,100,255:40,0 chr2 84931191 . G . PASS END=84931192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 84931193 . C . PASS END=84931203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:26,0 chr2 84931204 . T . PASS END=84931204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:26,0 chr2 84931205 . G . PASS END=84931225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,897:0,81,255:31,0 chr2 84931226 . A . PASS END=84931226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 84931227 . A . PASS END=84931227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr2 84931228 . A . PASS END=84931228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,885:0,76,255:30,0 chr2 84931229 . A . PASS END=84931271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:85:32:0,85,1103:0,85,255:40,0 chr2 84931272 . A . PASS END=84931272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1287:0,73,255:37,0 chr2 84931273 . G . PASS END=84931425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:40:0,87,1267:0,87,255:40,0 chr2 84931426 . A . PASS END=84931426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1471:0,79,255:33,0 chr2 84932610 . G . PASS END=84932863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:41:0,87,1305:0,118,255:40,0 chr2 84932864 . C . PASS END=84932868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:39:0,66,990:0,117,255:24,0 chr2 84932869 . C . PASS END=84932871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:31:0,51,765:0,93,255:17,0 chr2 84934020 . G . PASS END=84934118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,120,1800:0,123,255:40,0 chr2 84934119 . G . PASS END=84934119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:43:55:0,43,1548:0,43,255:40,0 chr2 84934120 . G . PASS END=84934143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,117,1755:0,126,255:40,0 chr2 84934644 . C . PASS END=84934648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,771:0,66,255:26,0 chr2 84934649 . A . PASS END=84934840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:27:0,81,970:0,81,255:40,0 chr2 84936467 . C . PASS END=84936481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 84936482 . A . PASS END=84936505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1056:0,87,255:31,0 chr2 84936506 . A . PASS END=84936506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,951:0,65,255:30,0 chr2 84936507 . T . PASS END=84936517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,896:0,81,255:32,0 chr2 84936518 . C . PASS END=84936518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1048:0,69,255:32,0 chr2 84936519 . C . PASS END=84936654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:34:0,85,939:0,85,255:40,0 chr2 84936655 . T . PASS END=84936655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1225:0,56,255:30,0 chr2 84936656 . G . PASS END=84936670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:34:0,90,1335:0,95,255:33,0 chr2 84937411 . G . PASS END=84937536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:51:0,120,1800:0,153,255:40,1 chr2 84940219 . C . PASS END=84940383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:93:32:0,93,1394:0,96,255:40,0 chr2 84942684 . G . PASS END=84942751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,123,255:40,0 chr2 84945328 . T . PASS END=84945508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:32:0,87,1305:0,96,255:40,0 chr2 84949749 . A . PASS END=84949752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 84949753 . C . PASS END=84949775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr2 84949776 . C . PASS END=84949778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:28,0 chr2 84949779 . G . PASS END=84949779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr2 84949780 . A . PASS END=84949901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:29:0,81,1027:0,87,255:40,0 chr2 84949902 . C . PASS END=84949903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:35:0,78,1170:0,89,255:26,0 chr2 84949904 . G . PASS END=84949906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:27,0 chr2 84949907 . C . PASS END=84949924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 84949925 . A . PASS END=84949928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,58,255:19,0 chr2 84954793 . T . PASS END=84955026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:37:0,98,1518:0,98,255:40,0 chr2 84960568 . G . PASS END=84960703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:32:0,96,1172:0,96,255:40,0 chr2 84972204 . G . PASS END=84972347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:35:0,84,1260:0,94,255:40,0 chr2 84972348 . T . PASS END=84972348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 84972349 . T . PASS END=84972350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 84972351 . T . PASS END=84972373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr2 84989879 . G . PASS END=84989890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,818:0,75,255:25,0 chr2 84989891 . C . PASS END=84989891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 84989892 . T . PASS END=84989892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 84989893 . T . PASS END=84989899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1194:0,93,255:31,0 chr2 84989900 . T . PASS END=84989900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,928:0,76,255:30,0 chr2 84989901 . T . PASS END=84989913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr2 84989914 . T . PASS END=84989914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:30,0 chr2 84989915 . C . PASS END=84990040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:30:0,83,1172:0,83,255:40,0 chr2 84990041 . T . PASS END=84990041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,906:0,73,255:27,0 chr2 84990042 . T . PASS END=84990058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr2 84990059 . T . PASS END=84990063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:26,0 chr2 84990064 . A . PASS END=84990064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr2 84990065 . G . PASS END=84990069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:24,0 chr2 85008617 . G . PASS END=85008777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:51:0,114,1710:0,120,255:40,0 chr2 85011846 . A . PASS END=85011934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,147,255:40,0 chr2 85012734 . G . PASS END=85012880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:63:0,120,1800:0,154,255:40,0 chr2 85014288 . G . PASS END=85014300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:42:0,115,1488:0,115,255:40,0 chr2 85014301 . T . PASS END=85014301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1535:0,78,255:40,0 chr2 85014302 . T . PASS END=85014426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,111,1530:0,111,255:40,0 chr2 85023430 . G . PASS END=85023549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,99,1399:0,113,255:40,0 chr2 85024661 . G . PASS END=85024782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:37:0,107,1352:0,107,255:40,0 chr2 85032789 . T . PASS END=85032918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:40:0,110,1434:0,110,255:40,0 chr2 85035539 . A . PASS END=85035539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1185:0,44,255:33,0 chr2 85035540 . A . PASS END=85035658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:34:0,85,1172:0,85,255:40,0 chr2 85035659 . T . PASS END=85035659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:28,0 chr2 85035660 . A . PASS END=85035664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:30,0 chr2 85035665 . A . PASS END=85035666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 85039465 . A . PASS END=85039467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85039468 . T . PASS END=85039468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr2 85039469 . C . PASS END=85039473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr2 85039474 . G . PASS END=85039474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 85039475 . A . PASS END=85039476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 85039477 . A . PASS END=85039477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr2 85039478 . C . PASS END=85039487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1081:0,82,255:29,0 chr2 85039488 . A . PASS END=85039488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 85039489 . G . PASS END=85039494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 85039495 . G . PASS END=85039495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 85039496 . C . PASS END=85039497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 85039498 . G . PASS END=85039499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1063:0,74,255:27,0 chr2 85039500 . A . PASS END=85039501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1150:0,85,255:32,0 chr2 85039502 . T . PASS END=85039502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:30,0 chr2 85039503 . T . PASS END=85039566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1219:0,86,255:39,0 chr2 85039567 . C . PASS END=85039567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:36,0 chr2 85039568 . T . PASS END=85039607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:38:0,81,1294:0,81,255:39,0 chr2 85039608 . A . PASS END=85039608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:34,0 chr2 85039609 . T . PASS END=85039638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:29:0,81,1160:0,87,255:36,0 chr2 85039639 . T . PASS END=85039650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,925:0,67,255:26,0 chr2 85040182 . C . PASS END=85040254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,132,255:40,0 chr2 85041095 . G . PASS END=85041228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:31:0,84,1260:0,93,255:40,0 chr2 85041229 . C . PASS END=85041244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,70,255:26,0 chr2 85041245 . A . PASS END=85041246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr2 85042985 . T . PASS END=85042986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 85042987 . G . PASS END=85043163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:27:0,81,940:0,81,255:40,0 chr2 85043164 . A . PASS END=85043164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr2 85043165 . C . PASS END=85043170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:28,0 chr2 85043171 . A . PASS END=85043185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:27,0 chr2 85043186 . G . PASS END=85043190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr2 85043191 . A . PASS END=85043191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 85043192 . A . PASS END=85043195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:25:0,54,810:0,75,255:18,0 chr2 85043196 . T . PASS END=85043196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,677:0,39,255:17,0 chr2 85043197 . C . PASS END=85043207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,52,255:19,0 chr2 85046429 . G . PASS END=85046434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 85046435 . C . PASS END=85046436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 85046437 . A . PASS END=85046440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,872:0,64,255:26,0 chr2 85046441 . A . PASS END=85046442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 85046443 . T . PASS END=85046443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,830:0,70,255:26,0 chr2 85046444 . T . PASS END=85046455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:31,0 chr2 85046456 . T . PASS END=85046456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 85046457 . C . PASS END=85046485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1340:0,92,255:36,0 chr2 85046486 . A . PASS END=85046486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:30,0 chr2 85046487 . C . PASS END=85046501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:31,0 chr2 85046502 . A . PASS END=85046532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,831:0,66,255:25,0 chr2 85049041 . T . PASS END=85049073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,660:0,43,255:19,0 chr2 85049074 . C . PASS END=85049076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 85049077 . C . PASS END=85049081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:21:0,53,836:0,53,255:20,0 chr2 85049082 . C . PASS END=85049111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr2 85049112 . A . PASS END=85049112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 85049113 . G . PASS END=85049144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr2 85049145 . A . PASS END=85049145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 85049146 . A . PASS END=85049149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 85049150 . C . PASS END=85049150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 85049151 . C . PASS END=85049191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr2 85049192 . A . PASS END=85049219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 85049220 . T . PASS END=85049224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:12,0 chr2 85051077 . C . PASS END=85051139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:18,0 chr2 85051140 . C . PASS END=85051150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 85051151 . C . PASS END=85051174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 85051175 . G . PASS END=85051176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85051177 . G . PASS END=85051177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:21,0 chr2 85051178 . C . PASS END=85051179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 85051180 . T . PASS END=85051180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 85051181 . G . PASS END=85051186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr2 85051187 . A . PASS END=85051187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 85051188 . C . PASS END=85051202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 85051203 . A . PASS END=85051215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 85051216 . G . PASS END=85051292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr2 85051293 . A . PASS END=85051293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:21,0 chr2 85051294 . G . PASS END=85051300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:22,0 chr2 85051301 . C . PASS END=85051328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:18,0 chr2 85059179 . T . PASS END=85059185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1360:0,111,255:37,0 chr2 85059186 . T . PASS END=85059186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr2 85059187 . G . PASS END=85059269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1305:0,93,255:40,0 chr2 85065355 . C . PASS END=85065365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,210,255:40,0 chr2 85066273 . C . PASS END=85066276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,841:0,69,255:24,0 chr2 85066277 . T . PASS END=85066277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 85066278 . C . PASS END=85066280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 85066281 . A . PASS END=85066281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:23,0 chr2 85066282 . A . PASS END=85066286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr2 85066287 . A . PASS END=85066287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 85066288 . A . PASS END=85066301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,872:0,65,255:26,0 chr2 85066302 . T . PASS END=85066424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,986:0,81,255:40,0 chr2 85066425 . G . PASS END=85066425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:29,0 chr2 85066426 . T . PASS END=85066438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1200:0,83,255:30,0 chr2 85066439 . A . PASS END=85066439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 85066440 . T . PASS END=85066443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 85066444 . G . PASS END=85066447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr2 85068985 . C . PASS END=85068985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 85068986 . T . PASS END=85068986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 85068987 . G . PASS END=85069019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:34,0 chr2 85069020 . G . PASS END=85069020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr2 85069021 . G . PASS END=85069074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1125:0,82,255:35,0 chr2 85069075 . A . PASS END=85069075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 85069076 . C . PASS END=85069076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 85069077 . T . PASS END=85069077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 85069078 . G . PASS END=85069081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 85069082 . G . PASS END=85069083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:26,0 chr2 85069084 . T . PASS END=85069097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr2 85069098 . G . PASS END=85069098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 85069099 . C . PASS END=85069100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:22,0 chr2 85069101 . G . PASS END=85069101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 85069102 . C . PASS END=85069103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,776:0,66,255:22,0 chr2 85069104 . G . PASS END=85069104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 85069105 . G . PASS END=85069113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,853:0,69,255:23,0 chr2 85069114 . G . PASS END=85069131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr2 85097349 . C . PASS END=85097357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr2 85097358 . G . PASS END=85097358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 85097359 . T . PASS END=85097359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 85097360 . T . PASS END=85097482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1034:0,90,255:38,0 chr2 85097483 . C . PASS END=85097483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr2 85097484 . C . PASS END=85097568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1046:0,93,255:37,0 chr2 85097569 . T . PASS END=85097578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr2 85097579 . G . PASS END=85097589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 85097590 . C . PASS END=85097591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 85097592 . C . PASS END=85097600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:29:0,54,810:0,87,255:19,0 chr2 85097601 . G . PASS END=85097611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 85097612 . A . PASS END=85097679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,44,255:19,0 chr2 85097680 . T . PASS END=85097680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 85097681 . C . PASS END=85097698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 85097699 . G . PASS END=85097731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:22,0 chr2 85097732 . T . PASS END=85097733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 85097734 . G . PASS END=85097740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1045:0,71,255:25,0 chr2 85097741 . G . PASS END=85097741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:23,0 chr2 85097742 . G . PASS END=85097754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr2 85097755 . A . PASS END=85097755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 85097756 . A . PASS END=85097756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr2 85097757 . C . PASS END=85097760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 85097761 . A . PASS END=85097777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr2 85097778 . C . PASS END=85097784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 85097785 . A . PASS END=85097785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 85097786 . A . PASS END=85097820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1069:0,84,255:33,0 chr2 85097821 . A . PASS END=85097821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,989:0,68,255:29,0 chr2 85097822 . C . PASS END=85097843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1194:0,83,255:31,0 chr2 85097844 . T . PASS END=85097844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 85097845 . G . PASS END=85097846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 85097847 . G . PASS END=85097847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 85097848 . C . PASS END=85097853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 85097854 . A . PASS END=85097854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr2 85097855 . A . PASS END=85097860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 85097861 . A . PASS END=85097861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr2 85097862 . T . PASS END=85097868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 85097869 . T . PASS END=85097872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:26,0 chr2 85097873 . G . PASS END=85097909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,637:0,54,255:18,0 chr2 85108056 . T . PASS END=85108062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,936:0,84,255:29,0 chr2 85108063 . T . PASS END=85108063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 85108064 . T . PASS END=85108072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr2 85108073 . A . PASS END=85108079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1055:0,74,255:28,0 chr2 85108080 . G . PASS END=85108080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85108081 . G . PASS END=85108081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 85108082 . T . PASS END=85108083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr2 85108084 . C . PASS END=85108086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 85108087 . G . PASS END=85108087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 85108088 . G . PASS END=85108089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85108090 . G . PASS END=85108091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 85108092 . C . PASS END=85108146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1235:0,88,255:37,0 chr2 85108147 . C . PASS END=85108154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:26,0 chr2 85108155 . G . PASS END=85108163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:27:0,48,810:0,48,255:19,0 chr2 85133142 . A . PASS END=85133241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:35:0,84,1191:0,84,255:40,0 chr2 85133513 . C . PASS END=85133517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 85133518 . G . PASS END=85133534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,366:0,30,255:12,0 chr2 85133535 . T . PASS END=85133535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr2 85133536 . G . PASS END=85133547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 85198575 . A . PASS END=85198575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 85198576 . T . PASS END=85198576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:13,0 chr2 85198577 . G . PASS END=85198583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr2 85198584 . C . PASS END=85198584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 85198585 . A . PASS END=85198590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 85199324 . A . PASS END=85199330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:17,0 chr2 85199331 . G . PASS END=85199340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr2 85199341 . C . PASS END=85199345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:23,0 chr2 85199346 . T . PASS END=85199346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 85199347 . T . PASS END=85199360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,823:0,69,255:23,0 chr2 85199361 . A . PASS END=85199362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 85199363 . G . PASS END=85199363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 85255012 . G . PASS END=85255145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:38:0,90,1350:0,98,255:40,0 chr2 85255146 . C . PASS END=85255151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:69:40:0,69,1035:0,104,255:26,0 chr2 85255152 . C . PASS END=85255165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:19:0,42,630:0,57,255:19,0 chr2 85255166 . A . PASS END=85255170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,37,255:13,0 chr2 85255171 . T . PASS END=85255171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,488:0,9,255:12,0 chr2 85255172 . A . PASS END=85255172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:11,0 chr2 85255173 . G . PASS END=85255179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,459:0,39,255:13,0 chr2 85262139 . A . PASS END=85262278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:32:0,93,1395:0,96,255:40,0 chr2 85270687 . A . PASS END=85270781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:33:0,96,1325:0,99,255:40,0 chr2 85270782 . A . PASS END=85270782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1349:0,76,255:36,0 chr2 85270783 . G . PASS END=85270788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 85273227 . G . PASS END=85273229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:24,0 chr2 85273230 . G . PASS END=85273230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 85273231 . A . PASS END=85273231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 85273232 . A . PASS END=85273233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 85273234 . C . PASS END=85273234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 85273235 . G . PASS END=85273244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 85273245 . C . PASS END=85273245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 85273246 . G . PASS END=85273246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85273247 . A . PASS END=85273247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr2 85273248 . C . PASS END=85273249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:30,0 chr2 85273250 . T . PASS END=85273251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:30,0 chr2 85273252 . T . PASS END=85273375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:31:0,83,1156:0,83,255:40,0 chr2 85273376 . T . PASS END=85273376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1407:0,74,255:35,0 chr2 85273377 . A . PASS END=85273399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1305:0,95,255:37,0 chr2 85273400 . T . PASS END=85273400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 85273401 . G . PASS END=85273401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 85276489 . A . PASS END=85276492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,475:0,45,255:16,0 chr2 85276493 . T . PASS END=85276494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 85276495 . T . PASS END=85276500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr2 85276501 . A . PASS END=85276501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:16,0 chr2 85276502 . G . PASS END=85276503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85276504 . T . PASS END=85276504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr2 85276505 . A . PASS END=85276516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85276517 . A . PASS END=85276519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 85276520 . T . PASS END=85276520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85276521 . T . PASS END=85276521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 85276522 . C . PASS END=85276525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85276526 . A . PASS END=85276526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 85276527 . G . PASS END=85276532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,762:0,66,255:23,0 chr2 85276533 . C . PASS END=85276534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 85276535 . G . PASS END=85276542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,864:0,61,255:25,0 chr2 85276543 . C . PASS END=85276596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1135:0,86,255:34,0 chr2 85276597 . A . PASS END=85276597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1194:0,64,255:31,0 chr2 85276598 . A . PASS END=85276718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1178:0,83,255:40,0 chr2 85276719 . A . PASS END=85276719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 85276720 . A . PASS END=85276720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 85276721 . T . PASS END=85276721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 85276722 . A . PASS END=85276722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 85276723 . C . PASS END=85276724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1047:0,71,255:27,0 chr2 85276725 . G . PASS END=85276726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 85276727 . A . PASS END=85276737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr2 85276738 . A . PASS END=85276738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:21,0 chr2 85276739 . G . PASS END=85276740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:27:0,63,945:0,65,255:21,0 chr2 85276741 . C . PASS END=85276761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,629:0,51,255:17,0 chr2 85276762 . T . PASS END=85276769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:12,0 chr2 85276770 . A . PASS END=85276771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 85280271 . G . PASS END=85280271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85280272 . T . PASS END=85280272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr2 85280273 . T . PASS END=85280280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 85280281 . C . PASS END=85280281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr2 85280282 . C . PASS END=85280287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,942:0,84,255:28,0 chr2 85280288 . T . PASS END=85280288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 85280289 . G . PASS END=85280315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1064:0,87,255:38,0 chr2 85280316 . A . PASS END=85280316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:37,0 chr2 85280317 . A . PASS END=85280532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:98:38:0,98,1365:0,98,255:40,0 chr2 85360808 . A . LowDepth;LowGQ END=85360861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 85360862 . G . LowGQ END=85360916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,39:0,0,39:3,0 chr2 85360917 . A . PASS END=85360948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 85360949 . G . PASS END=85360985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 85360986 . G . PASS END=85360988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 85360989 . A . PASS END=85361026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 85361027 . G . PASS END=85361056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:12,0 chr2 85361139 . G . PASS END=85361149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,729:0,57,255:19,0 chr2 85361150 . C . PASS END=85361150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 85361151 . C . PASS END=85361151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 85361152 . C . PASS END=85361156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 85361157 . C . PASS END=85361166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 85361167 . A . PASS END=85361168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85361169 . A . PASS END=85361169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 85361170 . C . PASS END=85361182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 85361183 . G . PASS END=85361200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:19,0 chr2 85361201 . A . PASS END=85361202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 85361446 . T . PASS END=85361453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,714:0,57,255:19,0 chr2 85361454 . C . PASS END=85361470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,925:0,72,255:26,0 chr2 85361471 . C . PASS END=85361477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 85361478 . G . PASS END=85361478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr2 85361479 . G . PASS END=85361487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 85361488 . A . PASS END=85361488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 85361489 . C . PASS END=85361554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1079:0,88,255:34,0 chr2 85361555 . T . PASS END=85361565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:28:0,75,1125:0,80,255:26,0 chr2 85361566 . C . PASS END=85361567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 85361568 . C . PASS END=85361573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 85510618 . T . PASS END=85510620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 85510621 . C . PASS END=85510625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 85510626 . G . PASS END=85510686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1188:0,93,255:36,0 chr2 85510687 . T . PASS END=85510701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:26:0,63,945:0,78,255:24,0 chr2 85529607 . T . PASS END=85529615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,873:0,72,255:26,0 chr2 85529616 . G . PASS END=85529617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 85529618 . T . PASS END=85529618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 85529619 . C . PASS END=85529621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 85529622 . G . PASS END=85529632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 85529633 . C . PASS END=85529634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 85529635 . C . PASS END=85529636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 85529637 . C . PASS END=85529653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr2 85529654 . G . PASS END=85529654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 85529655 . A . PASS END=85529664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85529665 . T . PASS END=85529685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:24:0,63,945:0,68,255:24,0 chr2 85529686 . T . PASS END=85529699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:19,0 chr2 85529700 . C . PASS END=85529705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,40,255:13,0 chr2 85529706 . A . PASS END=85529706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:9:19:0,9,507:0,9,255:10,0 chr2 85529707 . C . PASS END=85529709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 85529710 . A . PASS END=85529710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,525:0,21,255:12,0 chr2 85529711 . C . PASS END=85529712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 85529713 . T . PASS END=85529713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,451:0,18,255:13,0 chr2 85529714 . C . PASS END=85529715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 85529716 . C . PASS END=85529716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:14,0 chr2 85529717 . C . PASS END=85529719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 85529720 . A . PASS END=85529720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr2 85529721 . G . LowGQ END=85529721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,396:10,0,255:12,0 chr2 85529722 . A . PASS END=85529723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,415:0,28,255:13,0 chr2 85529724 . A . PASS END=85529724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,388:0,12,255:13,0 chr2 85529725 . T . PASS END=85529727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 85529728 . A . PASS END=85529728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr2 85529729 . T . PASS END=85529729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:13,0 chr2 85529730 . C . LowGQ END=85529730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,363:5,0,255:10,0 chr2 85529731 . C . PASS END=85529731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 85529732 . A . LowGQ END=85529732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,396:2,0,255:11,0 chr2 85529733 . A . PASS END=85529734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 85529735 . G . LowGQ END=85529735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,355:5,0,255:11,0 chr2 85529736 . A . PASS END=85529736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 85529737 . C . PASS END=85529737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,394:0,9,255:11,0 chr2 85529738 . A . PASS END=85529739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 85531015 . C . PASS END=85531039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,917:0,64,255:26,0 chr2 85531040 . A . PASS END=85531040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:24,0 chr2 85531041 . T . PASS END=85531041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 85531042 . C . PASS END=85531045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr2 85531046 . G . PASS END=85531046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 85531047 . C . PASS END=85531048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 85531049 . G . PASS END=85531050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 85531051 . C . PASS END=85531053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr2 85531054 . C . PASS END=85531054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 85531055 . G . PASS END=85531059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 85531060 . A . PASS END=85531063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,76,255:24,0 chr2 85531064 . A . PASS END=85531064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,848:0,54,255:22,0 chr2 85531065 . C . PASS END=85531065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 85531066 . T . PASS END=85531066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,910:0,56,255:23,0 chr2 85531067 . C . PASS END=85531073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,71,255:22,0 chr2 85531074 . G . PASS END=85531075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:20,0 chr2 85531076 . A . PASS END=85531079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr2 85531080 . G . PASS END=85531080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr2 85531081 . T . PASS END=85531087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 85531088 . A . PASS END=85531088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 85531089 . A . PASS END=85531089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,664:0,30,255:17,0 chr2 85531090 . T . PASS END=85531095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 85531096 . A . PASS END=85531096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,568:0,15,255:16,0 chr2 85531097 . C . PASS END=85531101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:18,0 chr2 85531102 . T . PASS END=85531102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,513:0,24,255:16,0 chr2 85531103 . C . PASS END=85531103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 85531104 . G . PASS END=85531104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:9:19:0,9,446:0,9,255:16,0 chr2 85531105 . G . PASS END=85531105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 85531106 . C . PASS END=85531107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:21:18:0,21,504:0,21,255:16,0 chr2 85531108 . G . PASS END=85531109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 85531110 . C . PASS END=85531110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,580:0,37,255:16,0 chr2 85531111 . T . PASS END=85531111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 85531112 . C . PASS END=85531112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr2 85531113 . G . PASS END=85531113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:14,0 chr2 85531114 . T . PASS END=85531114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr2 85531115 . C . PASS END=85531117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 85531118 . A . LowGQ END=85531118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,435:18,0,255:12,0 chr2 85531119 . C . PASS END=85531119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:15,0 chr2 85531120 . A . PASS END=85531120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 85531378 . G . PASS END=85531390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 85531391 . A . PASS END=85531391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr2 85531392 . T . PASS END=85531392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 85531393 . G . PASS END=85531393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 85531394 . T . PASS END=85531395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 85531396 . C . PASS END=85531396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:15,0 chr2 85531397 . T . PASS END=85531398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 85531399 . C . PASS END=85531399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr2 85531400 . C . PASS END=85531446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr2 85531447 . C . PASS END=85531457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,495:0,31,255:13,0 chr2 85531458 . C . PASS END=85531458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 85531459 . C . PASS END=85531461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 85532383 . C . PASS END=85532402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr2 85532403 . C . PASS END=85532403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 85532404 . T . PASS END=85532431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:18,0 chr2 85532432 . G . PASS END=85532432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 85532433 . G . PASS END=85532451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 85532452 . C . PASS END=85532452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:14,0 chr2 85532453 . C . PASS END=85532460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 85532461 . T . PASS END=85532462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,438:0,31,255:13,0 chr2 85532463 . C . PASS END=85532465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 85532466 . T . PASS END=85532467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 85532468 . G . PASS END=85532470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 85532471 . T . PASS END=85532471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 85532472 . C . PASS END=85532476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 85532477 . A . PASS END=85532477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:15,0 chr2 85532478 . T . PASS END=85532478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr2 85532479 . C . PASS END=85532479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,493:0,1,255:14,0 chr2 85532480 . G . PASS END=85532480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 85532481 . T . PASS END=85532484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 85532485 . G . LowGQ END=85532485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,441:13,0,255:12,0 chr2 85532486 . C . PASS END=85532487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 85532488 . G . PASS END=85532488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,482:0,4,255:13,0 chr2 85532489 . G . PASS END=85532493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 85532494 . G . PASS END=85532494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 85532495 . G . PASS END=85532497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 85532498 . C . PASS END=85532498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr2 85532499 . C . PASS END=85532504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 85532505 . G . PASS END=85532505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr2 85532506 . C . PASS END=85532509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 85532510 . A . PASS END=85532517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,438:0,31,255:12,0 chr2 85532518 . A . PASS END=85532518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 85532519 . G . PASS END=85532526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 85533329 . G . PASS END=85533332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1000:0,78,255:26,0 chr2 85533333 . T . PASS END=85533340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85533341 . C . PASS END=85533342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 85533343 . C . PASS END=85533347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 85533348 . A . PASS END=85533349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,976:0,70,255:26,0 chr2 85533350 . A . PASS END=85533367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1113:0,87,255:32,0 chr2 85533368 . G . PASS END=85533368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,828:0,46,255:29,0 chr2 85533369 . C . PASS END=85533396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1133:0,82,255:33,0 chr2 85533397 . T . PASS END=85533414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1030:0,68,255:26,0 chr2 85533415 . A . PASS END=85533415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85533416 . G . PASS END=85533423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1024:0,71,255:26,0 chr2 85533424 . C . PASS END=85533424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 85533425 . C . PASS END=85533454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,1000:0,68,255:26,0 chr2 85533455 . A . PASS END=85533455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 85533456 . A . PASS END=85533462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,817:0,69,255:23,0 chr2 85533463 . C . PASS END=85533463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 85533464 . C . PASS END=85533472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,806:0,63,255:21,0 chr2 85533473 . G . PASS END=85533473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 85533474 . A . PASS END=85533475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85533476 . C . PASS END=85533476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 85533477 . C . PASS END=85533488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 85533575 . T . PASS END=85533678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1115:0,88,255:40,0 chr2 85533679 . C . PASS END=85533682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:25,0 chr2 85534765 . G . PASS END=85534771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1189:0,86,255:35,0 chr2 85534772 . A . PASS END=85534772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr2 85534773 . A . PASS END=85534840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,89,255:37,0 chr2 85536152 . G . PASS END=85536171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,501:0,45,255:17,0 chr2 85536172 . A . PASS END=85536172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 85536173 . A . PASS END=85536174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 85536175 . A . PASS END=85536175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 85536176 . A . PASS END=85536183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,681:0,41,255:18,0 chr2 85536184 . G . PASS END=85536184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85536185 . T . PASS END=85536186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 85536187 . C . PASS END=85536192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85536193 . C . PASS END=85536193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 85536194 . T . PASS END=85536194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85536195 . G . PASS END=85536201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr2 85536202 . G . PASS END=85536202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:17,0 chr2 85536203 . A . PASS END=85536221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr2 85536222 . T . PASS END=85536222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 85536223 . G . PASS END=85536243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 85536244 . C . PASS END=85536244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 85536245 . T . PASS END=85536246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr2 85536247 . G . PASS END=85536247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 85536248 . A . PASS END=85536249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 85536250 . T . PASS END=85536253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:15,0 chr2 85536254 . C . PASS END=85536255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 85536256 . G . PASS END=85536256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 85536257 . C . PASS END=85536260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 85536261 . T . PASS END=85536263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 85536264 . C . PASS END=85536264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:12,0 chr2 85536265 . T . PASS END=85536288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,435:0,39,255:13,0 chr2 85536289 . G . PASS END=85536301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 85536302 . C . PASS END=85536311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 85536312 . G . PASS END=85536312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 85536313 . C . PASS END=85536315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 85536316 . G . PASS END=85536317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 85536318 . C . PASS END=85536318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr2 85536319 . C . PASS END=85536319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 85536320 . A . PASS END=85536350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,429:0,39,255:13,0 chr2 85536351 . C . PASS END=85536351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 85536352 . C . PASS END=85536352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 85536353 . G . PASS END=85536374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:15,0 chr2 85536375 . T . PASS END=85536375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 85536376 . G . PASS END=85536396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 85536397 . G . PASS END=85536428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 85536429 . C . PASS END=85536438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 85536439 . C . PASS END=85536443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 85536444 . G . PASS END=85536468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 85536469 . A . PASS END=85536477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:9:0,10,225:0,10,255:6,0 chr2 85536478 . G . PASS END=85536482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 85536483 . G . PASS END=85536484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 85536485 . T . PASS END=85536489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 85536490 . T . PASS END=85536510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,133:0,12,133:5,0 chr2 85536511 . A . PASS END=85536513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 85536514 . C . PASS END=85536518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 85536519 . T . PASS END=85536535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr2 85536536 . C . PASS END=85536577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,139:0,12,139:5,0 chr2 85536578 . C . PASS END=85536585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,125:3,0 chr2 85549788 . T . PASS END=85549788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 85549789 . C . PASS END=85549791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 85549792 . A . PASS END=85549792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 85549793 . G . PASS END=85549827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1241:0,87,255:39,0 chr2 85549828 . T . PASS END=85549867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1412:0,101,255:40,0 chr2 85549868 . A G, 159.61 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,39,0:1.000,0.000:39:0,23,0:0,16,0:110:197,113,0,297,297,297:255,120,0:0,0:1.5961e+02,1.0961e+02,0.0000e+00,2.9438e+02,3.2915e+02,2.9739e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,25:0,0,16,23:85549868 chr2 85549869 . G . PASS END=85549873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1482:0,120,255:40,0 chr2 85549874 . A G, 159.61 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,39,0:1.000,0.000:39:0,23,0:0,16,0:110:197,113,0,297,297,297:255,120,0:0,0:1.5961e+02,1.0961e+02,0.0000e+00,2.9438e+02,3.2915e+02,2.9739e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,25:0,0,16,23:85549868 chr2 85549875 . A . PASS END=85549891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1421:0,104,255:40,0 chr2 85549892 . G . PASS END=85549892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1441:0,68,255:37,0 chr2 85549893 . T . PASS END=85549914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:39:0,93,1395:0,101,255:37,0 chr2 85549915 . A . PASS END=85549922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1350:0,114,255:33,0 chr2 85552002 . C . PASS END=85552121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:40:0,91,1363:0,91,255:40,0 chr2 85553631 . C . PASS END=85553652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:16,0 chr2 85553653 . A . PASS END=85553664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 85553665 . G . PASS END=85553665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 85553666 . C . PASS END=85553680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 85553681 . C . PASS END=85553717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,424:0,45,255:19,0 chr2 85553718 . G . PASS END=85553718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr2 85553719 . C . PASS END=85553723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 85553724 . A . PASS END=85553724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 85553725 . T . PASS END=85553746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr2 85553747 . G . PASS END=85553759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:17,0 chr2 85553760 . G . PASS END=85553760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 85553761 . C . PASS END=85553778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 85553779 . A . PASS END=85553779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:15,0 chr2 85553780 . G . PASS END=85553780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 85553781 . T . PASS END=85553781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 85553782 . G . PASS END=85553783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 85553784 . C T, 94.67 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:132,48,0,232,232,232:255,48,0:0,0:9.4668e+01,4.4668e+01,1.4833e-04,2.2944e+02,2.6421e+02,2.3245e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,5:0,0,7,9 chr2 85553785 . C . PASS END=85553790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 85553791 . C . PASS END=85553803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr2 85553804 . A . PASS END=85553821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,568:0,45,255:17,0 chr2 85553822 . T . PASS END=85553834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr2 85553835 . T . PASS END=85553835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:15,0 chr2 85553836 . T . PASS END=85553873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,612:0,48,255:19,0 chr2 85553874 . T . PASS END=85553876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 85553877 . A . PASS END=85553879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85553880 . C . PASS END=85553888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 85553889 . C . PASS END=85553889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 85553890 . T . PASS END=85553895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 85553896 . T . PASS END=85553896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 85553897 . C . PASS END=85553904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr2 85553905 . G . PASS END=85553912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr2 85553913 . A . PASS END=85553913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 85553914 . G . PASS END=85553914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 85553915 . A . PASS END=85553915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr2 85553916 . C . PASS END=85553930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1162:0,90,255:31,0 chr2 85553931 . C . PASS END=85553931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 85553932 . G . PASS END=85553946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:31,0 chr2 85553947 . T . PASS END=85553949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 85553950 . G . PASS END=85553959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1105:0,82,255:29,0 chr2 85553960 . C . PASS END=85553960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 85553961 . A . PASS END=85553962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 85553963 . A . PASS END=85553964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:27,0 chr2 85553965 . T . PASS END=85553994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,987:0,84,255:31,0 chr2 85553995 . C . PASS END=85553995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 85553996 . C . PASS END=85554012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1089:0,93,255:32,0 chr2 85554013 . T . PASS END=85554013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,827:0,49,255:29,0 chr2 85554014 . T . PASS END=85554037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1241:0,86,255:33,0 chr2 85554038 . T . PASS END=85554038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1217:0,64,255:32,0 chr2 85554039 . G . PASS END=85554042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 85554043 . T . PASS END=85554052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,88,255:32,0 chr2 85554053 . T . PASS END=85554068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:26,0 chr2 85554069 . A . PASS END=85554079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:18,0 chr2 85554080 . G A, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,16,0:0,6,0:63:151,66,0,840,66,840:255,66,0:0,0:1.1321e+02,6.3210e+01,2.0709e-06,4.5000e+02,9.7980e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,9:0,0,9,13 chr2 85554081 . G . PASS END=85554101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,714:0,54,255:19,0 chr2 85554102 . C . PASS END=85554102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 85554103 . T . PASS END=85554117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:25,0 chr2 85554118 . T . PASS END=85554130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,955:0,75,255:26,0 chr2 85554131 . C . PASS END=85554132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85554133 . T . PASS END=85554141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:26,0 chr2 85554142 . G . PASS END=85554144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 85554145 . T . PASS END=85554145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 85554146 . T . PASS END=85554147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 85554148 . C . PASS END=85554148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:27,0 chr2 85554149 . T . PASS END=85554152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 85554153 . C . PASS END=85554153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr2 85554154 . C . PASS END=85554154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 85554155 . C . PASS END=85554155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:29,0 chr2 85554156 . G . PASS END=85554159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 85554160 . A . PASS END=85554170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 85554171 . C . PASS END=85554176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 85554177 . T . PASS END=85554177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 85554178 . G . PASS END=85554190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1139:0,80,255:30,0 chr2 85554191 . T . PASS END=85554191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1100:0,49,255:28,0 chr2 85554192 . A . PASS END=85554202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 85554203 . T . PASS END=85554203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:27,0 chr2 85554204 . T . PASS END=85554216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:29,0 chr2 85554217 . T . PASS END=85554217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 85554218 . C . PASS END=85554230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1180:0,83,255:32,0 chr2 85554231 . G . PASS END=85554231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:33,0 chr2 85554232 . T . PASS END=85554239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1280:0,102,255:35,0 chr2 85554240 . G . PASS END=85554240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:30,0 chr2 85554241 . T . PASS END=85554247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,105,255:34,0 chr2 85554248 . G . PASS END=85554248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1323:0,78,255:33,0 chr2 85554249 . G . PASS END=85554532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:82:38:0,82,1327:0,82,255:40,0 chr2 85554533 . T . PASS END=85554533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1390:0,65,255:39,0 chr2 85554534 . G . PASS END=85554534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 85554535 . C . PASS END=85554535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1390:0,79,255:39,0 chr2 85554536 . C . PASS END=85554539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:43:0,98,1393:0,98,255:40,0 chr2 85554540 . T . PASS END=85554540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1389:0,60,255:40,0 chr2 85554541 . T . PASS END=85554548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:87:44:0,87,1365:0,87,255:40,0 chr2 85554549 . T . PASS END=85554549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1460:0,77,255:40,0 chr2 85554550 . G . PASS END=85554567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:44:0,96,1447:0,96,255:40,0 chr2 85554568 . T . PASS END=85554568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:51:44:0,51,1071:0,51,255:39,0 chr2 85554569 . T . PASS END=85554589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:42:0,82,1440:0,82,255:40,0 chr2 85554590 . T . PASS END=85554590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1451:0,74,255:37,0 chr2 85554591 . T . PASS END=85554591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1400:0,54,255:37,0 chr2 85554592 . G . PASS END=85554615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:81:38:0,81,1307:0,81,255:39,0 chr2 85554616 . G . PASS END=85554616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:35,0 chr2 85554617 . T . PASS END=85554655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1212:0,89,255:35,0 chr2 85554656 . G . PASS END=85554656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1233:0,74,255:29,0 chr2 85554657 . G . PASS END=85554657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 85554658 . C . PASS END=85554690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:26,0 chr2 85554691 . T . PASS END=85554692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 85554693 . G . PASS END=85554697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 85554698 . A . PASS END=85554706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 85554707 . G . PASS END=85554708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85554709 . C . PASS END=85554711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,660:0,44,255:20,0 chr2 85554712 . T . PASS END=85554715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:24,0 chr2 85554716 . T . PASS END=85554717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 85554718 . A . PASS END=85554735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,64,255:22,0 chr2 85554736 . A . PASS END=85554740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 85554741 . T . PASS END=85554741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:16,0 chr2 85554742 . C . PASS END=85554770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,644:0,41,255:19,0 chr2 85554771 . T . PASS END=85554771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 85554772 . T . PASS END=85554808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,599:0,48,255:19,0 chr2 85555040 . C . PASS END=85555066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1388:0,108,255:37,0 chr2 85555067 . A . PASS END=85555067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1262:0,70,255:34,0 chr2 85555068 . G . PASS END=85555085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:35,0 chr2 85570365 . C . PASS END=85570367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:24,0 chr2 85570368 . A . PASS END=85570368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 85570369 . T . PASS END=85570369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 85570370 . T . PASS END=85570370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 85570371 . C . PASS END=85570383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,885:0,75,255:26,0 chr2 85570384 . G . PASS END=85570399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:29,0 chr2 85570400 . C . PASS END=85570400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 85570401 . A . PASS END=85570419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1001:0,84,255:36,0 chr2 85570420 . T . PASS END=85570420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:34,0 chr2 85570421 . A . PASS END=85570504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:32:0,83,1202:0,83,255:38,0 chr2 85570762 . C . PASS END=85570774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:13,0 chr2 85570775 . G . PASS END=85570775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 85570776 . T . PASS END=85570779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,419:0,39,255:13,0 chr2 85570780 . G . PASS END=85570781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 85570782 . A . PASS END=85570795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 85570796 . C . PASS END=85570796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 85570797 . C . PASS END=85570797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 85570798 . T . PASS END=85570798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr2 85570799 . C . PASS END=85570799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 85570800 . A . LowGQ END=85570803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,396:32,0,255:13,0 chr2 85570804 . A . PASS END=85570809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,545:0,45,255:16,0 chr2 85570810 . T . PASS END=85570823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr2 85570824 . A . PASS END=85570839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,864:0,63,255:24,0 chr2 85570840 . G . PASS END=85570840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 85570841 . G . PASS END=85570844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr2 85570845 . G . PASS END=85570847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 85570848 . C . PASS END=85570848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 85570849 . C T, 19.88 PASS DP=27;MQ=188.39;MQRankSum=-3.703;ReadPosRankSum=3.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:21,6,0:0.222,0.000:27:11,1,0:10,5,0:20:55,0,50,214,751,966:151,0,255:21,0:1.9881e+01,4.4889e-02,5.3045e+01,2.1445e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,2,4:9,12,3,3:85570849 chr2 85570850 . G . PASS END=85570856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr2 85570857 . G A, 23.01 PASS DP=29;MQ=184.36;MQRankSum=-3.899;ReadPosRankSum=2.829;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:22,7,0:0.241,0.000:29:11,2,0:11,5,0:23:58,0,50,250,758,1008:184,0,255:21,0:2.3009e+01,2.1795e-02,5.3022e+01,2.5034e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,4,3:15,7,5,2:85570849 chr2 85570858 . C . PASS END=85570874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 85570875 . A . PASS END=85570875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr2 85570876 . G . PASS END=85570884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 85570885 . G . PASS END=85570885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr2 85570886 . G . PASS END=85570887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 85570888 . T . PASS END=85570888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 85570889 . G . PASS END=85570891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85570892 . G . PASS END=85570893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 85570894 . G . PASS END=85570894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 85570895 . T . PASS END=85570895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 85570896 . G . PASS END=85570896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 85570897 . G . PASS END=85570921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,65,255:26,0 chr2 85571122 . C . PASS END=85571122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 85571123 . T . PASS END=85571123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,862:0,64,255:26,0 chr2 85571124 . T . PASS END=85571129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,974:0,81,255:28,0 chr2 85571130 . C . PASS END=85571130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 85571131 . C . PASS END=85571136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:30,0 chr2 85571137 . T . PASS END=85571137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 85571138 . G . PASS END=85571140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 85571141 . A . PASS END=85571141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:27,0 chr2 85571142 . A . PASS END=85571145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 85571146 . T . PASS END=85571146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr2 85571147 . T . PASS END=85571157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1155:0,80,255:31,0 chr2 85571158 . T . PASS END=85571158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 85571159 . G . PASS END=85571185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1141:0,82,255:32,0 chr2 85571186 . T . PASS END=85571186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:30,0 chr2 85571187 . T . PASS END=85571286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:29:0,80,1102:0,80,255:40,0 chr2 85571287 . G . PASS END=85571287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 85571288 . C . PASS END=85571288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 85571362 . C . PASS END=85571363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 85571364 . G . PASS END=85571445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1094:0,84,255:37,0 chr2 85571446 . T . PASS END=85571446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 85571447 . G . PASS END=85571455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1156:0,93,255:31,0 chr2 85571456 . G . PASS END=85571471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 85571717 . G . PASS END=85571747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1172:0,87,255:39,0 chr2 85571748 . A . PASS END=85571848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,85,255:40,0 chr2 85571849 . T . PASS END=85571855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,80,255:26,0 chr2 85572895 . T . PASS END=85572895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr2 85572896 . T . PASS END=85572896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 85572897 . A . PASS END=85572897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 85572898 . A . PASS END=85572898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr2 85572899 . T . PASS END=85572899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 85572900 . C . PASS END=85572901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr2 85572902 . G . PASS END=85572909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:31,0 chr2 85572910 . C . PASS END=85572910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 85572911 . T . PASS END=85572995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:31:0,85,1030:0,85,255:40,0 chr2 85572996 . C . PASS END=85573032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,108,1620:0,125,255:40,0 chr2 85573033 . G A, 181.51 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,21,0:0,24,0:132:219,135,0,1671,135,1671:255,135,0:0,0:1.8151e+02,1.3151e+02,0.0000e+00,4.5000e+02,1.6628e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,22:0,0,21,24 chr2 85573034 . G . PASS END=85573048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1473:0,104,255:39,0 chr2 85573049 . G A, 169.48 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,20,0:0,21,0:119:207,122,0,1525,122,1525:255,123,0:0,0:1.6948e+02,1.1948e+02,0.0000e+00,4.5000e+02,1.5425e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,19:0,0,23,18 chr2 85573050 . G . PASS END=85573086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:37:0,84,1260:0,101,255:38,0 chr2 85573087 . C . PASS END=85573118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:32,0 chr2 85573119 . C . PASS END=85573119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr2 85573120 . C . PASS END=85573181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:32:0,82,1060:0,82,255:33,0 chr2 85573182 . T . PASS END=85573182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr2 85573183 . G . PASS END=85573189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1218:0,96,255:32,0 chr2 85573190 . A . PASS END=85573217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 85576507 . C . PASS END=85576530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr2 85576531 . G . PASS END=85576545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:23,0 chr2 85576546 . C . PASS END=85576546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 85576547 . A . PASS END=85576568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,825:0,61,255:26,0 chr2 85576569 . C . PASS END=85576579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 85576580 . C . PASS END=85576581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 85576582 . G . PASS END=85576593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 85576594 . T . PASS END=85576606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,74,255:26,0 chr2 85576607 . A . PASS END=85576607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr2 85576608 . A . PASS END=85576613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 85576614 . C . PASS END=85576614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85576615 . T . PASS END=85576615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 85576616 . G . PASS END=85576638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1072:0,87,255:29,0 chr2 85576639 . C . PASS END=85576640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 85576641 . C . PASS END=85576655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:28,0 chr2 85576656 . T . PASS END=85576656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 85576657 . T . PASS END=85576661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85576662 . A . PASS END=85576662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 85576663 . G . PASS END=85576669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 85576670 . G . PASS END=85576673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 85576674 . A . PASS END=85576674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:25,0 chr2 85576675 . T . PASS END=85576698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,65,255:25,0 chr2 85576699 . T . PASS END=85576704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 85577163 . C . PASS END=85577176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr2 85577177 . A . PASS END=85577269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:81:29:0,81,1097:0,84,255:39,0 chr2 85577270 . A . PASS END=85577270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1254:0,72,255:37,0 chr2 85577271 . A . PASS END=85577310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:38:0,99,1485:0,110,255:40,0 chr2 85577311 . G . PASS END=85577311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:35,0 chr2 85577312 . G . PASS END=85577345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,86,255:36,0 chr2 85577346 . G . PASS END=85577346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 85577347 . G . PASS END=85577348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 85577349 . C . PASS END=85577349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr2 85577350 . T . PASS END=85577360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:21,0 chr2 85577361 . C . PASS END=85577364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr2 85577903 . C . PASS END=85577903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 85577904 . T . PASS END=85577904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85577905 . T . PASS END=85577907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,682:0,44,255:19,0 chr2 85577908 . C . PASS END=85577909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 85577910 . A . PASS END=85577910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr2 85577911 . G . PASS END=85577911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 85577912 . C . PASS END=85577912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 85577913 . T . PASS END=85577914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,736:0,20,255:23,0 chr2 85577915 . T . PASS END=85577915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:23,0 chr2 85577916 . A . PASS END=85577917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 85577918 . A . PASS END=85577918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:24,0 chr2 85577919 . T . PASS END=85577930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,908:0,61,255:26,0 chr2 85577931 . A . PASS END=85577938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr2 85577939 . C . PASS END=85577939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 85577940 . T . PASS END=85577940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 85577941 . C . PASS END=85577950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 85577951 . C . PASS END=85577954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr2 85577955 . T . PASS END=85577956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr2 85577957 . C . PASS END=85577960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85577961 . A . PASS END=85577962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 85577963 . G . PASS END=85577969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr2 85577970 . A . PASS END=85577970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr2 85577971 . T . PASS END=85577974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 85577975 . G . PASS END=85577975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 85577976 . G . PASS END=85578011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,93,255:37,0 chr2 85578012 . C . PASS END=85578012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr2 85578013 . C . PASS END=85578036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1327:0,95,255:38,0 chr2 85578037 . T . PASS END=85578037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:34,0 chr2 85578038 . G . PASS END=85578060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,108,255:35,0 chr2 85578061 . C . PASS END=85578061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr2 85578062 . C . PASS END=85578089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1239:0,86,255:34,0 chr2 85578090 . T . PASS END=85578090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 85578091 . C . PASS END=85578097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:32,0 chr2 85578098 . A . PASS END=85578098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1115:0,66,255:29,0 chr2 85578099 . A . PASS END=85578109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1081:0,82,255:31,0 chr2 85578110 . G . PASS END=85578110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:26,0 chr2 85578111 . C . PASS END=85578114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 85578115 . C . PASS END=85578116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 85578117 . T . PASS END=85578117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1000:0,43,255:21,0 chr2 85578118 . C . PASS END=85578129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:23,0 chr2 85578130 . C . PASS END=85578140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,46,255:15,0 chr2 85578141 . A . PASS END=85578141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 85578142 . T . PASS END=85578144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 85578803 . C . PASS END=85578818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,856:0,61,255:26,0 chr2 85578819 . G . PASS END=85578822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 85578823 . T . PASS END=85578823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 85578824 . T . PASS END=85578832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,942:0,84,255:28,0 chr2 85578833 . A . PASS END=85578833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,944:0,68,255:26,0 chr2 85578834 . G . PASS END=85578876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:30:0,83,1042:0,83,255:39,0 chr2 85578877 . A . PASS END=85578877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr2 85578878 . G . PASS END=85578919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:36:0,87,1395:0,87,255:38,0 chr2 85578920 . G . PASS END=85578923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:36:0,78,1170:0,108,255:26,0 chr2 85578924 . C . PASS END=85578934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:28,0 chr2 85578935 . T . PASS END=85578935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 85578936 . G . PASS END=85578939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 85578940 . A . PASS END=85578940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,915:0,67,255:26,0 chr2 85578941 . T . PASS END=85578941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:25,0 chr2 85578942 . T . PASS END=85578945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85578946 . A . PASS END=85578950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 85578951 . A . PASS END=85578951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:21,0 chr2 85578952 . T . PASS END=85578958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr2 85578959 . T . PASS END=85578959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr2 85578960 . C . PASS END=85578966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 85578967 . A . PASS END=85578967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 85578968 . C . PASS END=85578981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 85578982 . A . PASS END=85578984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 85578985 . G . PASS END=85578985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85581459 . C . PASS END=85581461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,892:0,64,255:26,0 chr2 85581462 . G . PASS END=85581471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85581472 . C . PASS END=85581474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 85581475 . C . PASS END=85581482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85581483 . C . PASS END=85581483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 85581484 . C . PASS END=85581490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,992:0,81,255:29,0 chr2 85581491 . T . PASS END=85581493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 85581494 . G . PASS END=85581497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 85581498 . C . PASS END=85581498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 85581499 . C . PASS END=85581501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 85581502 . G . PASS END=85581502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 85581503 . G . PASS END=85581538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1153:0,80,255:38,0 chr2 85581539 . T . PASS END=85581539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:37,0 chr2 85581540 . T . PASS END=85581622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1127:0,93,255:40,0 chr2 85581623 . A . PASS END=85581630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 85584322 . A . PASS END=85584375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,147,255:40,0 chr2 85589309 . G . PASS END=85589383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,142,255:40,0 chr2 85590220 . A . PASS END=85590223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1333:0,95,255:36,0 chr2 85590224 . C . PASS END=85590224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 85590225 . A . PASS END=85590289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:37:0,96,1338:0,104,255:40,0 chr2 85595809 . T . PASS END=85595877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:42:0,109,1755:0,109,255:40,0 chr2 85596862 . G . PASS END=85596868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,792:0,63,255:26,0 chr2 85596869 . A . PASS END=85596877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1180:0,93,255:31,0 chr2 85596878 . A . PASS END=85596878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr2 85596879 . G . PASS END=85596920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:33:0,95,1259:0,95,255:37,0 chr2 85596921 . C . PASS END=85596921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr2 85596922 . A . PASS END=85596947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1255:0,86,255:32,0 chr2 85596948 . T . PASS END=85596948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,987:0,62,255:29,0 chr2 85596949 . T . PASS END=85596953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 85598209 . A . PASS END=85598209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 85598210 . A . PASS END=85598210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:15,0 chr2 85598211 . A . PASS END=85598211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 85598212 . A . PASS END=85598223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr2 85598224 . A . PASS END=85598226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:15,0 chr2 85598227 . A . PASS END=85598228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 85598229 . T . PASS END=85598229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85598230 . C . PASS END=85598230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 85598231 . G . PASS END=85598231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85598232 . A . PASS END=85598232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:20,0 chr2 85598233 . A . PASS END=85598233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr2 85598234 . G . PASS END=85598258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,823:0,65,255:26,0 chr2 85598259 . C . PASS END=85598260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 85598261 . A . PASS END=85598272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,984:0,65,255:26,0 chr2 85598273 . C . PASS END=85598276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 85598277 . A . PASS END=85598277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 85598278 . A . PASS END=85598278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85598279 . A . PASS END=85598279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 85598280 . G . PASS END=85598291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr2 85598292 . C . PASS END=85598292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 85598293 . C . PASS END=85598295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 85598296 . C . PASS END=85598296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 85598297 . G . PASS END=85598309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 85598310 . C . PASS END=85598313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr2 85598314 . G . PASS END=85598326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr2 85598327 . C . PASS END=85598327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 85598328 . T . PASS END=85598344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1241:0,86,255:34,0 chr2 85598345 . C . PASS END=85598345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:33,0 chr2 85598346 . G . PASS END=85598355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1296:0,92,255:34,0 chr2 85598356 . G . PASS END=85598356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr2 85598357 . G . PASS END=85598386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1295:0,95,255:38,0 chr2 85598387 . C . PASS END=85598387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:36,0 chr2 85598388 . G . PASS END=85598406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1350:0,111,255:37,0 chr2 85598563 . G . PASS END=85598564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 85598565 . G . PASS END=85598567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 85598568 . C . PASS END=85598573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 85598574 . A . PASS END=85598656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1089:0,80,255:33,0 chr2 85598657 . A . PASS END=85598660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 85598661 . C . PASS END=85598661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 85598662 . A . PASS END=85598662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 85598663 . C . PASS END=85598667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 85598668 . A . PASS END=85598681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:26,0 chr2 85598682 . C . PASS END=85598686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,59,255:19,0 chr2 85604467 . G . PASS END=85604484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:25,0 chr2 85604485 . A . PASS END=85604485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 85604486 . C . PASS END=85604502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1116:0,84,255:29,0 chr2 85604503 . T . PASS END=85604503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 85604504 . C . PASS END=85604509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 85604510 . C . PASS END=85604511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 85604512 . T . PASS END=85604527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:30,0 chr2 85604528 . C . PASS END=85604528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 85604529 . C . PASS END=85604565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:32,0 chr2 85604566 . A . PASS END=85604566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:28,0 chr2 85604567 . G . PASS END=85604567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 85604568 . A . PASS END=85604568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 85604569 . T . PASS END=85604575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 85604576 . C . PASS END=85604576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 85604577 . C . PASS END=85604578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85604579 . G . PASS END=85604579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:27,0 chr2 85604580 . T . PASS END=85604580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:26,0 chr2 85604581 . C . PASS END=85604584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 85604585 . T . PASS END=85604596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr2 85604597 . G . PASS END=85604597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 85614221 . A . PASS END=85614247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:69:0,120,1800:0,178,255:40,0 chr2 85616874 . C . PASS END=85616938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:43:0,107,1358:0,107,255:40,0 chr2 85616939 . G . PASS END=85616940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:62:43:0,62,1169:0,62,255:36,0 chr2 85616941 . G . PASS END=85616950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:42:0,90,1359:0,90,255:39,0 chr2 85617261 . A . PASS END=85617261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 85617262 . G . PASS END=85617262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85617263 . A . PASS END=85617263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr2 85617264 . G . PASS END=85617291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:26,0 chr2 85617292 . G . PASS END=85617296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 85617297 . G . PASS END=85617301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 85617302 . G . PASS END=85617338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,92,255:34,0 chr2 85617339 . C . PASS END=85617339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 85617340 . T . PASS END=85617393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:38:0,82,1411:0,82,255:40,0 chr2 85617394 . C . PASS END=85617394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1342:0,58,255:39,0 chr2 85617395 . T . PASS END=85617583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:38:0,99,1485:0,113,255:40,0 chr2 85617584 . T . PASS END=85617584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:31,0 chr2 85617585 . T . PASS END=85617588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1290:0,80,255:33,0 chr2 85617589 . T . PASS END=85617599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,82,255:25,0 chr2 85617600 . T . PASS END=85617600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:23,0 chr2 85617601 . T . PASS END=85617606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr2 85617607 . A . PASS END=85617609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,853:0,58,255:23,0 chr2 85617610 . C . PASS END=85617610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 85617611 . A . PASS END=85617611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:19,0 chr2 85617612 . T . PASS END=85617616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 85617617 . T . PASS END=85617617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 85617618 . C . PASS END=85617618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 85617619 . T . PASS END=85617619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 85617620 . G . PASS END=85617620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 85617621 . A . PASS END=85617621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 85617883 . A . PASS END=85617883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 85617884 . G . PASS END=85617886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr2 85617887 . G . PASS END=85617887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr2 85617888 . G . PASS END=85617968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,491:0,44,255:18,0 chr2 85617969 . T . PASS END=85617969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 85617970 . C . PASS END=85617972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 85617973 . T . PASS END=85617973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 85617974 . G . PASS END=85617986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:19,0 chr2 85617987 . A . PASS END=85617996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 85617997 . G . PASS END=85618004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85618005 . G . PASS END=85618013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 85618014 . T . PASS END=85618018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 85618019 . G . PASS END=85618019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr2 85618020 . G . PASS END=85618020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 85618021 . A . PASS END=85618022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 85618023 . C . PASS END=85618023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 85618024 . T . PASS END=85618034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 85618035 . G . PASS END=85618035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 85618036 . G . PASS END=85618040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,784:0,63,255:21,0 chr2 85618041 . A . PASS END=85618041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 85618042 . G . PASS END=85618047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85618048 . T . PASS END=85618053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 85618054 . C . PASS END=85618058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85618059 . T . PASS END=85618085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:17:0,42,630:0,44,255:19,0 chr2 85622016 . T . PASS END=85622021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr2 85622022 . C . PASS END=85622023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 85622024 . A . PASS END=85622024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:34,0 chr2 85622025 . G . PASS END=85622058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1252:0,94,255:38,0 chr2 85622059 . T C, 48.44 PASS DP=38;MQ=250.00;MQRankSum=5.189;ReadPosRankSum=4.065;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,16,0:0.421,0.000:38:13,10,0:9,6,0:46:83,0,47,183,183,183:255,0,255:16,0:4.8440e+01,1.0562e-04,5.0000e+01,1.8321e+02,2.1798e+02,1.8622e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,13,6,10:12,10,8,8 chr2 85622060 . G . PASS END=85622064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,108,255:32,0 chr2 85622065 . T . PASS END=85622065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:30,0 chr2 85622066 . G . PASS END=85622078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:32,0 chr2 85622079 . C . PASS END=85622080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 85622081 . C . PASS END=85622081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 85622661 . C . PASS END=85622721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,820:0,66,255:25,0 chr2 85622722 . T . PASS END=85622722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 85622723 . G . PASS END=85622729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 85622730 . C . PASS END=85622730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 85622731 . T . PASS END=85622733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 85622734 . T . PASS END=85622734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 85622735 . C . PASS END=85622739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 85622740 . G . PASS END=85622740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 85622741 . C . PASS END=85622749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 85625143 . C . PASS END=85625184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,167,255:40,0 chr2 85625185 . C . PASS END=85625221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,178,255:40,0 chr2 85625222 . T G, 49.14 PASS DP=60;MQ=250.00;MQRankSum=6.612;ReadPosRankSum=3.952;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,27,0:0.450,0.000:60:15,15,0:18,12,0:48:84,0,50,961,1170,2130:255,0,255:28,0:4.9136e+01,7.4811e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,18,6,21:15,18,14,13 chr2 85625223 . G . PASS END=85625259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,123,255:40,0 chr2 85625260 . C . PASS END=85625275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,108,1673:0,108,255:40,0 chr2 85625813 . C . PASS END=85625818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 85625819 . C . PASS END=85625819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 85625820 . A . PASS END=85625821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 85625822 . A . PASS END=85625831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr2 85625832 . T . PASS END=85625832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 85625833 . G . PASS END=85625841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 85625842 . C . PASS END=85625842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 85625843 . C . PASS END=85625867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,601:0,51,255:19,0 chr2 85625868 . G . PASS END=85625868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 85625869 . G . PASS END=85625905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,643:0,40,255:19,0 chr2 85626259 . C . PASS END=85626264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr2 85626265 . C . PASS END=85626275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr2 85626276 . G . PASS END=85626276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85626277 . C . PASS END=85626278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85626279 . C . PASS END=85626279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 85626280 . C . PASS END=85626301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,892:0,62,255:25,0 chr2 85626302 . A . PASS END=85626302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr2 85626303 . C . PASS END=85626304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 85626305 . T . PASS END=85626305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,846:0,39,255:25,0 chr2 85626306 . G . PASS END=85626322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 85626323 . T . PASS END=85626323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,908:0,51,255:22,0 chr2 85626324 . C . PASS END=85626385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,870:0,62,255:26,0 chr2 85626386 . C . PASS END=85626386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 85626387 . C . PASS END=85626387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 85626388 . A . PASS END=85626388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 85626389 . C . PASS END=85626396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,900:0,72,255:24,0 chr2 85626397 . G . PASS END=85626397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 85626398 . G . PASS END=85626400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 85626401 . A . PASS END=85626403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 85626404 . A . PASS END=85626404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:18,0 chr2 85626405 . T . PASS END=85626408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 85628288 . C . PASS END=85628296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:24,0 chr2 85628297 . G . PASS END=85628297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:23,0 chr2 85628298 . T . PASS END=85628301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 85628302 . G . PASS END=85628310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 85628311 . A . PASS END=85628315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 85628316 . C . PASS END=85628450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,986:0,81,255:40,0 chr2 85628451 . T . PASS END=85628451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:26,0 chr2 85628452 . C . PASS END=85628452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 85628652 . C . PASS END=85628769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,1250:0,82,255:40,0 chr2 85628770 . G . PASS END=85628772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 85628773 . C . PASS END=85628773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 85628774 . A . PASS END=85628791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,74,255:26,0 chr2 85628792 . G . PASS END=85628792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 85628793 . G . PASS END=85628795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 85628796 . T . PASS END=85628796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr2 85628797 . G . PASS END=85628806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 85628908 . C . PASS END=85628908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85628909 . T . PASS END=85628909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,884:0,40,255:27,0 chr2 85628910 . A . PASS END=85628913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 85628914 . A . PASS END=85628914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:29,0 chr2 85628915 . C . PASS END=85628917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,976:0,60,255:30,0 chr2 85628918 . G . PASS END=85628918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 85628919 . T . PASS END=85628921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1062:0,74,255:30,0 chr2 85628922 . A . PASS END=85628924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 85628925 . T . PASS END=85628926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 85628927 . G . PASS END=85628928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:31,0 chr2 85628929 . A . PASS END=85628929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr2 85628930 . A . PASS END=85628935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:33,0 chr2 85628936 . T . PASS END=85628936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr2 85628937 . T . PASS END=85628944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:33,0 chr2 85628945 . A . PASS END=85628945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,1042:0,54,255:30,0 chr2 85628946 . T . PASS END=85628946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 85628947 . T . PASS END=85628947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1143:0,71,255:30,0 chr2 85628948 . G . PASS END=85629058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:39:0,93,1395:0,99,255:40,0 chr2 85629059 . T . PASS END=85629059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:31,0 chr2 85629060 . G . PASS END=85629080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr2 85629246 . C . PASS END=85629268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,102,1530:0,113,255:40,0 chr2 85637837 . G T, 48.05 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=2.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,7,0:0.389,0.000:18:5,3,0:6,4,0:47:83,0,50,250,393,644:217,0,255:9,0:4.8054e+01,8.9825e-05,5.3000e+01,2.5033e+02,4.2816e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,2,5:5,6,4,3 chr2 85656498 . A . PASS END=85656534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,474:0,42,255:16,0 chr2 85656535 . G . PASS END=85656535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 85656536 . C . PASS END=85656560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr2 85656561 . A . PASS END=85656561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 85656562 . G . PASS END=85656565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 85656566 . G . PASS END=85656573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 85656574 . T . PASS END=85656578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:14:0,24,360:0,42,255:8,0 chr2 85656579 . T . PASS END=85656591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:8,0 chr2 85656710 . G . PASS END=85656726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:13,0 chr2 85656727 . C . PASS END=85656735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 85656930 . A . PASS END=85656931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 85656932 . G . PASS END=85656932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 85656933 . C . PASS END=85656947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr2 85656948 . G . PASS END=85656948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 85656949 . G . PASS END=85656955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr2 85656956 . G . PASS END=85656981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr2 85656982 . T . PASS END=85656982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 85656983 . G . PASS END=85656983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 85656984 . C . PASS END=85656984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 85656985 . C . PASS END=85657004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,660:0,51,255:18,0 chr2 85657005 . C . PASS END=85657008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 85657009 . C . PASS END=85657010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85657011 . C . PASS END=85657028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr2 85657029 . T . PASS END=85657029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 85657030 . G . PASS END=85657046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr2 85657047 . C . PASS END=85657049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr2 85657050 . T . PASS END=85657050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 85657051 . C . PASS END=85657064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 85657065 . A . PASS END=85657069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 85657070 . C . PASS END=85657071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85657072 . C . PASS END=85657109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,64,255:25,0 chr2 85657110 . G . PASS END=85657110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 85657111 . C . PASS END=85657124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 85657125 . C . PASS END=85657138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,46,255:19,0 chr2 85657311 . A . PASS END=85657327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 85657328 . G . PASS END=85657342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 85657343 . G . PASS END=85657344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 85657345 . C . PASS END=85657345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 85657346 . T . PASS END=85657346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 85657347 . G . PASS END=85657349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 85657350 . T . PASS END=85657350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 85657351 . A . PASS END=85657364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:18,0 chr2 85657365 . G . PASS END=85657368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 85657369 . C . PASS END=85657372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 85657373 . A . PASS END=85657375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 85657376 . G . PASS END=85657402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:17:0,30,450:0,51,255:13,0 chr2 85657403 . T . PASS END=85657410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:21:17:0,21,360:0,21,255:9,0 chr2 85657411 . A . PASS END=85657413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:20:0,30,450:0,60,255:11,0 chr2 85657414 . A . PASS END=85657414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:10,0 chr2 85657415 . C . LowGQ END=85657415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,676:11,0,255:10,0 chr2 85657416 . T . PASS END=85657416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:22:0,36,540:0,66,255:12,0 chr2 85657417 . G . LowGQ END=85657417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,684:3,0,255:10,0 chr2 85657418 . G GAGCTGTCA, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=1.088;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:6,7,0:4,5,0:48:79,0,50,504,1379,1882:255,0,255:10,13:5.0000e+01,6.7304e-05,5.2618e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:5,5,5,7:3,7,4,8 chr2 85657419 . A . LowGQ END=85657419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,7:22:0:22:0,0,304:189,0,255:19,0 chr2 85657420 . G . PASS END=85657420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 85657421 . G . LowGQ END=85657426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,668:3,0,255:18,0 chr2 85657427 . T . PASS END=85657427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr2 85657428 . G . PASS END=85657429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 85657430 . T . PASS END=85657430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,593:0,24,255:17,0 chr2 85657431 . T . PASS END=85657431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:20,0 chr2 85657432 . T . PASS END=85657433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85657434 . T . PASS END=85657440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:20:0,50,798:0,50,255:19,0 chr2 85657441 . G . PASS END=85657449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 85657450 . T . PASS END=85657450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 85657451 . G . PASS END=85657453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 85657454 . C . PASS END=85657455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85657456 . G . PASS END=85657461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 85657462 . A . PASS END=85657472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 85657473 . G . PASS END=85657496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr2 85657497 . T . PASS END=85657498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 85657499 . G . PASS END=85657537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:19,0 chr2 85657538 . C . PASS END=85657541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 85657542 . G . PASS END=85657548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 85657549 . A . PASS END=85657549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 85657550 . G . PASS END=85657551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 85657552 . C . PASS END=85657557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 85657646 . C . PASS END=85657665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,692:0,44,255:19,0 chr2 85657666 . G . PASS END=85657681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 85657682 . G . PASS END=85657705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 85657706 . T . PASS END=85657706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr2 85657707 . G . PASS END=85657721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:18,0 chr2 85657722 . T . PASS END=85657725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 85657726 . T . PASS END=85657738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr2 85657739 . C . PASS END=85657753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 85657754 . G . PASS END=85657756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 85657757 . G . PASS END=85657761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr2 85657762 . C . PASS END=85657762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 85657763 . T . PASS END=85657775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 85658333 . A . PASS END=85658428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:31:0,85,1103:0,85,255:39,0 chr2 85658429 . G . LowGQ END=85658429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:0:33:0,0,722:19,0,255:26,0 chr2 85658430 . C . PASS END=85658434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,92,255:30,0 chr2 85658435 . T . LowGQ END=85658435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,686:35,0,255:24,0 chr2 85658436 . C . PASS END=85658436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,906:0,73,255:28,0 chr2 85658437 . C . PASS END=85658438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85658439 . A . PASS END=85658440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:42:30:0,42,822:0,42,255:27,0 chr2 85658441 . G . PASS END=85658441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 85658442 . C . PASS END=85658442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,927:0,70,255:26,0 chr2 85658443 . T . PASS END=85658444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,804:0,53,255:25,0 chr2 85658445 . C . PASS END=85658447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,942:0,70,255:26,0 chr2 85658448 . T . PASS END=85658448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,963:0,51,255:25,0 chr2 85658449 . T . PASS END=85658450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 85658451 . C . PASS END=85658451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,781:0,40,255:24,0 chr2 85658452 . C . PASS END=85658454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 85659022 . C . PASS END=85659030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,144,255:40,0 chr2 85659031 . G . PASS END=85659082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,140,255:40,0 chr2 85660222 . A . PASS END=85660244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:43:0,96,1540:0,96,255:40,0 chr2 85660694 . G . PASS END=85660699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 85660700 . G . PASS END=85660700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:23,0 chr2 85660701 . G . PASS END=85660704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr2 85660705 . T . PASS END=85660707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 85660708 . A . PASS END=85660710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 85660711 . G . PASS END=85660711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 85660712 . A . PASS END=85660722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,893:0,75,255:25,0 chr2 85660723 . G . PASS END=85660724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:22,0 chr2 85660725 . A . PASS END=85660729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,945:0,62,255:23,0 chr2 85660730 . T . PASS END=85660730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr2 85660731 . A . PASS END=85660747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,839:0,69,255:23,0 chr2 85660748 . G . PASS END=85660748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 85660749 . A . PASS END=85660754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 85661156 . T . PASS END=85661158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 85661159 . T . PASS END=85661159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 85661160 . G . PASS END=85661234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1109:0,80,255:35,0 chr2 85661463 . G . PASS END=85661493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:44:0,94,1552:0,94,255:40,0 chr2 85661580 . A . PASS END=85661620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,86,255:39,0 chr2 85662188 . A . PASS END=85662193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,102,1576:0,102,255:40,0 chr2 85662194 . G . PASS END=85662246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:49:0,81,1690:0,81,255:40,0 chr2 85662536 . G . PASS END=85662612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,108,1519:0,109,255:40,0 chr2 85662613 . A . PASS END=85662619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,108,1535:0,110,255:37,0 chr2 85662789 . G . PASS END=85662791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85662792 . G . PASS END=85662793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 85662794 . G . PASS END=85662798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr2 85662799 . A . PASS END=85662814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:28,0 chr2 85662815 . C . PASS END=85662815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 85662816 . T . PASS END=85662816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 85662817 . C . PASS END=85662817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 85662818 . A . PASS END=85662824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 85662825 . C . PASS END=85662825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 85662826 . A . PASS END=85662834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 85662835 . A . PASS END=85662837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 85662838 . C . PASS END=85662842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85662843 . A . PASS END=85662843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 85662844 . C . PASS END=85662854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 85662855 . C . PASS END=85662855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 85662856 . T . PASS END=85662856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 85662857 . T . PASS END=85662857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:29,0 chr2 85662858 . C . PASS END=85662858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 85662859 . T . PASS END=85662859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 85662860 . C . PASS END=85662866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr2 85662867 . C . PASS END=85662867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 85662868 . G . PASS END=85662872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 85662873 . T . PASS END=85662916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,933:0,75,255:26,0 chr2 85662917 . C . PASS END=85662918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr2 85662919 . T . PASS END=85662923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85662924 . C . PASS END=85662945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,43,255:19,0 chr2 85662946 . A . PASS END=85662947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:13,0 chr2 85663244 . G . PASS END=85663351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,102,1520:0,108,255:40,0 chr2 85663589 . C . PASS END=85663612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:26,0 chr2 85663613 . G . PASS END=85663627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 85663628 . T . PASS END=85663628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 85663629 . G . PASS END=85663705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1094:0,87,255:34,0 chr2 85766411 . A . PASS END=85766411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 85766412 . T . PASS END=85766450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:16,0 chr2 85766451 . A . PASS END=85766451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 85766452 . G . PASS END=85766469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr2 85766470 . C . PASS END=85766470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 85766471 . A . PASS END=85766483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr2 85766484 . T . PASS END=85766491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 85766492 . G . PASS END=85766492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr2 85766493 . G . PASS END=85766493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 85766494 . C . PASS END=85766494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 85766495 . C . PASS END=85766499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 85766500 . A . PASS END=85766500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 85766501 . G . PASS END=85766501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 85768206 . A . PASS END=85768283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:50:0,120,1800:0,146,255:40,0 chr2 85768378 . A . PASS END=85768500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:46:0,102,1530:0,124,255:40,0 chr2 85768756 . G . PASS END=85768868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,110,1565:0,110,255:40,0 chr2 85768949 . T . PASS END=85768949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 85768952 . G . PASS END=85769095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1194:0,83,255:40,0 chr2 85769278 . G . PASS END=85769283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 85769284 . G . PASS END=85769288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 85769289 . G . PASS END=85769388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:35:0,96,1396:0,101,255:40,0 chr2 85769389 . G . LowGQ END=85769389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,8:48:0:48:0,0,1091:4,0,255:36,0 chr2 85769390 . C . PASS END=85769486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1173:0,81,255:40,0 chr2 85769487 . T . PASS END=85769491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1035:0,60,255:26,0 chr2 85769492 . C . PASS END=85769495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:32:0,57,855:0,83,255:19,0 chr2 85769496 . G . PASS END=85769496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,102,255:21,0 chr2 85769688 . G . PASS END=85769691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:33,0 chr2 85769692 . A . PASS END=85769692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1250:0,59,255:35,0 chr2 85769693 . T . PASS END=85769710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:38:0,108,1549:0,110,255:40,0 chr2 85769711 . C G, 175.96 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,24,0:0,19,0:126:214,129,0,1633,129,1633:255,132,0:0,0:1.7596e+02,1.2596e+02,0.0000e+00,4.5000e+02,1.6073e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,20:0,0,26,17 chr2 85769712 . A . PASS END=85769748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,116,1606:0,116,255:40,0 chr2 85769749 . A . PASS END=85769866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,111,1665:0,132,255:40,0 chr2 85769867 . T . PASS END=85769870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:66:43:0,66,990:0,129,255:25,0 chr2 85770019 . T . PASS END=85770019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 85770024 . G . PASS END=85770161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:48:0,109,1623:0,109,255:40,0 chr2 85770785 . T . PASS END=85770785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 85770793 . G . PASS END=85770865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1197:0,92,255:36,0 chr2 85770866 . T . PASS END=85770866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr2 85770867 . G . PASS END=85770868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 85770869 . G . PASS END=85770869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:27,0 chr2 85770870 . A . PASS END=85770879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 85770880 . A . PASS END=85770895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,917:0,67,255:25,0 chr2 85772495 . C . PASS END=85772495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85772519 . T . PASS END=85772519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 85772582 . A . PASS END=85772582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr2 85772644 . A . PASS END=85772644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 85772660 . C . PASS END=85772660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr2 85772691 . G . PASS END=85772691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr2 85772769 . C . PASS END=85772769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1335:0,95,255:33,0 chr2 85772815 . G . PASS END=85772815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 85772842 . C . PASS END=85772842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 85772862 . A . PASS END=85772862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 85772979 . C . PASS END=85772979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 85773010 . A . PASS END=85773010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 85773127 . A . PASS END=85773127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 85773133 . T . PASS END=85773133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr2 85773136 . C . PASS END=85773136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 85773216 . A . PASS END=85773216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 85773235 . C . PASS END=85773235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85773287 . A . PASS END=85773287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 85773300 . A . PASS END=85773301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 85773539 . T TA,TAA, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.377;ReadPosRankSum=-0.745;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,11,2,0:0.579,0.105,0.000:19:2,6,0,0:4,5,2,0:30:68,0,27,82,51,119,106,56,138,142:255,0,168:6,19:5.0005e+01,4.6698e-03,2.9728e+01,8.2231e+01,6.9427e+01,1.2243e+02,1.2325e+02,9.0509e+01,1.7240e+02,1.6171e+02:0.00,18.00,21.00,18.00,36.00,21.00,34.77,52.77,52.77,37.77:3,3,7,6:1,5,8,5 chr2 85773540 . A . LowGQ END=85773540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:6,13:19:0:19:0,0,0:255,0,175:19,0 chr2 85773664 . G . PASS END=85773664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:4,0 chr2 85773865 . G . PASS END=85773865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 85773880 . A . PASS END=85773880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:70:0,120,1800:0,177,255:40,0 chr2 85774057 . T . PASS END=85774057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 85774092 . G . PASS END=85774092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,181,255:40,0 chr2 85774132 . C . PASS END=85774132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 85774162 . G . PASS END=85774162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 85774165 . T . PASS END=85774165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr2 85774283 . T . PASS END=85774283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 85774317 . T . PASS END=85774317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 85774341 . T . PASS END=85774341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 85774410 . A . PASS END=85774410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 85774497 . T . PASS END=85774497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 85774567 . A . PASS END=85774567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 85774649 . A . PASS END=85774649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 85774753 . A . PASS END=85774753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 85774758 . G . PASS END=85774758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 85774772 . A . PASS END=85774773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85774831 . G . LowGQ END=85774831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,9:23:0:23:0,0,186:255,0,255:20,0 chr2 85774997 . A . PASS END=85774997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1170:0,61,255:30,0 chr2 85775320 . T . PASS END=85775320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:8:34:0,8,1054:0,8,255:31,4 chr2 85775330 . T . PASS END=85775330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 85775332 . G . PASS END=85775332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 85775336 . C . PASS END=85775336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 85775345 . T . PASS END=85775345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 85775359 . T . PASS END=85775359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1309:0,95,255:33,0 chr2 85775371 . G . PASS END=85775371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 85775453 . C . PASS END=85775453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 85775690 . G . PASS END=85775690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 85775733 . A . PASS END=85775733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 85775812 . C . PASS END=85775812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 85775871 . T . PASS END=85775871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 85775912 . C . PASS END=85775912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 85776020 . T . PASS END=85776020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 85776038 . C . PASS END=85776038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 85776084 . T . PASS END=85776084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 85776156 . T . PASS END=85776156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 85776201 . A . PASS END=85776201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 85776210 . T . PASS END=85776210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 85776307 . C . PASS END=85776307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1250:0,105,255:35,0 chr2 85776354 . G . PASS END=85776354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 85776377 . C . PASS END=85776377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 85776447 . G . PASS END=85776447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:33:24:0,33,495:0,72,255:11,0 chr2 85776459 . G . PASS END=85776459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:21:21:0,21,315:0,63,255:7,0 chr2 85776949 . C . LowGQ END=85776951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,12:70:0:68:0,0,340:120,0,255:40,24 chr2 85776966 . C . PASS END=85776966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,5:67:81:67:0,81,1942:0,81,255:40,1 chr2 85777032 . A . PASS END=85777032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 85777057 . T . PASS END=85777232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:36:0,84,1260:0,86,255:40,0 chr2 85777233 . T . PASS END=85777238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1215:0,92,255:27,0 chr2 85777239 . T . PASS END=85777244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr2 85777245 . G . PASS END=85777245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:23,0 chr2 85777246 . G . PASS END=85777249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr2 85777633 . C . PASS END=85777633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 85777665 . G . PASS END=85777665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 85777678 . C . PASS END=85777716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:33:0,89,1278:0,89,255:38,0 chr2 85777717 . A . PASS END=85777717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:31,0 chr2 85777718 . A . PASS END=85777770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:30:0,82,1125:0,82,255:34,0 chr2 85777771 . T . PASS END=85777771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 85777772 . G . PASS END=85777775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 85777776 . G . PASS END=85777776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 85777777 . C . PASS END=85777784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 85777785 . A . PASS END=85777785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,944:0,73,255:26,0 chr2 85777786 . A . PASS END=85777791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 85777792 . T . PASS END=85777817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1014:0,68,255:26,0 chr2 85777818 . C . PASS END=85777820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 85777821 . T . PASS END=85777821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr2 85777822 . T . PASS END=85777824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 85777825 . A . PASS END=85777825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 85777826 . C . PASS END=85777838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:29,0 chr2 85777839 . C . PASS END=85777839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 85777840 . A . PASS END=85777842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 85777843 . G . PASS END=85777850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:25,0 chr2 85777851 . C . PASS END=85777869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:19:0,46,692:0,46,255:19,0 chr2 85777870 . G . PASS END=85777873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr2 85778048 . C . PASS END=85778064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,102,1656:0,102,255:40,2 chr2 85778065 . T . PASS END=85778065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1528:0,58,255:40,2 chr2 85778066 . T . PASS END=85778175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:33:0,84,1260:0,91,255:40,0 chr2 85778176 . T . PASS END=85778184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:24,0 chr2 85778185 . C . PASS END=85778193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,810:0,63,255:19,0 chr2 85778194 . A . PASS END=85778194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr2 85778195 . A . PASS END=85778195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 85778603 . C . PASS END=85778615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1119:0,82,255:34,0 chr2 85778616 . C . PASS END=85778616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:32,0 chr2 85778617 . C . PASS END=85778733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:33:0,99,1219:0,99,255:40,0 chr2 85778935 . C . PASS END=85778936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 85778937 . G . PASS END=85778950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 85778951 . G . PASS END=85778951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 85778952 . A . PASS END=85778952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 85778953 . A . PASS END=85778953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 85778954 . G . PASS END=85778958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 85778959 . C . PASS END=85778959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 85778960 . C . PASS END=85778960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 85778961 . T . PASS END=85779058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1197:0,86,255:37,0 chr2 85779059 . G . PASS END=85779059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr2 85779060 . G . PASS END=85779078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:33,0 chr2 85779079 . C . PASS END=85779079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr2 85779080 . G . PASS END=85779080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 85779081 . A . PASS END=85779099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr2 85779100 . A . PASS END=85779101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 85779102 . A . PASS END=85779102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 85779103 . T . PASS END=85779103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:19,0 chr2 85779104 . C . PASS END=85779104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 85779524 . G . PASS END=85779524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 85779539 . C . PASS END=85779690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:33:0,80,1210:0,80,255:40,0 chr2 85780062 . C . PASS END=85780065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 85780066 . G . PASS END=85780093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1033:0,84,255:40,0 chr2 85780094 . G . PASS END=85780130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:42:0,113,1582:0,113,255:40,0 chr2 85780131 . G A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=5.975;ReadPosRankSum=4.639;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,29,0:0.580,0.000:50:13,12,0:8,17,0:47:85,0,48,1008,743,1751:255,0,255:20,0:5.0000e+01,7.8953e-05,5.0866e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,18,11:10,11,13,16 chr2 85780132 . C . PASS END=85780168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,119,1621:0,119,255:40,0 chr2 85780169 . G . PASS END=85780193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,102,1530:0,113,255:40,0 chr2 85780343 . G . PASS END=85780343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 85780355 . C . PASS END=85780376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,769:0,69,255:23,0 chr2 85780377 . G . PASS END=85780377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:20,0 chr2 85780378 . G . PASS END=85780382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 85780383 . A . PASS END=85780383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 85780384 . A . PASS END=85780394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 85780395 . A . PASS END=85780397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 85780398 . A . PASS END=85780399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 85780400 . G . PASS END=85780400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 85780401 . T . PASS END=85780408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,961:0,65,255:26,0 chr2 85780409 . G . PASS END=85780411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85780412 . G . PASS END=85780431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr2 85780432 . G . PASS END=85780432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 85780433 . G . PASS END=85780444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:23,0 chr2 85780445 . C . PASS END=85780446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 85780447 . T . PASS END=85780455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 85780456 . T . PASS END=85780456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 85780457 . T . PASS END=85780457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,682:0,36,255:20,0 chr2 85780458 . T . PASS END=85780465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 85780466 . G . PASS END=85780466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 85780467 . C . PASS END=85780468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 85780469 . C . PASS END=85780471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 85780472 . C . PASS END=85780483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 85780484 . G . PASS END=85780484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 85780485 . G . PASS END=85780490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,816:0,72,255:25,0 chr2 85780491 . C . PASS END=85780491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 85780492 . T . PASS END=85780498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:25,0 chr2 85780499 . A . PASS END=85780526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:21:0,61,734:0,61,255:24,0 chr2 85780527 . T . PASS END=85780527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr2 85780528 . G . PASS END=85780533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85780534 . T . PASS END=85780535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 85780536 . C T, 110.20 PASS DP=21;MQ=249.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,12,0:0,9,0:60:148,63,0,814,63,814:255,63,0:0,0:1.1020e+02,6.0204e+01,4.1418e-06,4.5000e+02,9.4974e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,13:0,0,11,10 chr2 85780537 . G . PASS END=85780540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:17,0 chr2 85780541 . G . PASS END=85780541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 85780542 . C . PASS END=85780553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,537:0,45,255:15,0 chr2 85780554 . A . PASS END=85780561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 85780562 . A . PASS END=85780571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 85780572 . G . PASS END=85780573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 85780574 . G . PASS END=85780585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 85780586 . A . PASS END=85780586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 85780587 . G . PASS END=85780602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr2 85780603 . T . PASS END=85780610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 85780611 . G . PASS END=85780612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 85780613 . G . PASS END=85780618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 85780619 . A . PASS END=85780620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 85781266 . C . PASS END=85781280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 85781281 . G . PASS END=85781317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,124,255:40,0 chr2 85781318 . T G, 224.10 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,27,0:0,32,0:174:262,177,0,2224,177,2224:255,177,0:0,0:2.2410e+02,1.7410e+02,0.0000e+00,4.5000e+02,2.0887e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,39,20:0,0,25,34 chr2 85781319 . C . PASS END=85781355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:58:0,120,1800:0,148,255:40,1 chr2 85781356 . C . PASS END=85781429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:34:0,90,1350:0,102,255:40,0 chr2 85781433 . C . PASS END=85781433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 85782607 . T . PASS END=85782624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,131,255:40,0 chr2 85782625 . C . PASS END=85782713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:99:45:0,120,1800:0,135,255:40,0 chr2 85783305 . C . PASS END=85783383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:36:0,91,1226:0,91,255:40,0 chr2 85783391 . G . PASS END=85783391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 85785552 . C . PASS END=85785552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1429:0,114,255:38,0 chr2 85785563 . C . PASS END=85785728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,118,1576:0,118,255:40,0 chr2 85785758 . T . PASS END=85785785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,120,1800:0,123,255:40,0 chr2 85786014 . T . PASS END=85786199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:42:0,99,1485:0,116,255:40,0 chr2 85787341 . C T, 48.34 PASS DP=50;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=2.758;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:13,9,0:15,12,0:47:83,0,50,751,971,1722:255,0,255:27,0:4.8340e+01,8.5425e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,19,8,13:14,14,12,9 chr2 85787938 . C . PASS END=85787944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:34,0 chr2 85787945 . A . PASS END=85787945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1116:0,55,255:31,0 chr2 85787946 . A . PASS END=85788068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:32:0,81,1215:0,95,255:40,0 chr2 85788069 . G . PASS END=85788070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 85788071 . C . PASS END=85788073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr2 85788074 . T . PASS END=85788074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,956:0,38,255:27,0 chr2 85788075 . G . PASS END=85788092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:22:0,63,837:0,66,255:26,0 chr2 85788093 . T . PASS END=85788093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 85788094 . C . PASS END=85788100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 85788101 . T . PASS END=85788108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,806:0,53,255:18,0 chr2 85788509 . C . PASS END=85788509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,80,255:25,0 chr2 85788510 . T . PASS END=85788510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,726:0,47,255:23,0 chr2 85788511 . G . PASS END=85788514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,820:0,64,255:25,0 chr2 85788515 . T . PASS END=85788515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:11:26:0,11,629:0,11,255:21,0 chr2 85788516 . G . PASS END=85788516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 85788517 . G . PASS END=85788520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:27,0 chr2 85788521 . A . PASS END=85788523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,80,255:26,0 chr2 85788524 . T . PASS END=85788524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:14:27:0,14,607:0,14,255:20,0 chr2 85788525 . C . PASS END=85788525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,771:0,48,255:23,0 chr2 85788526 . C . PASS END=85788527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,789:0,64,255:24,0 chr2 85788528 . C . PASS END=85788528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,787:0,50,255:23,0 chr2 85788529 . G . PASS END=85788530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,782:0,67,255:24,0 chr2 85788531 . G . PASS END=85788531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,757:0,50,255:23,0 chr2 85788532 . G . PASS END=85788532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,83,255:24,0 chr2 85788533 . A . LowGQ END=85788533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,5:28:0:28:0,0,532:36,0,255:21,0 chr2 85788534 . C . PASS END=85788536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 85788537 . G . LowGQ END=85788537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,6:27:0:27:0,0,508:47,0,255:20,0 chr2 85788538 . G . PASS END=85788538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:23,0 chr2 85788539 . C . PASS END=85788539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:22,0 chr2 85788540 . A . PASS END=85788540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:14:27:0,14,684:0,14,255:22,0 chr2 85788541 . G . PASS END=85788541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,705:0,6,255:21,0 chr2 85788542 . A . PASS END=85788542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,790:0,28,255:20,0 chr2 85788543 . C . PASS END=85788543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,770:0,45,255:21,0 chr2 85788544 . A . PASS END=85788544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 85788545 . C . PASS END=85788545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,797:0,45,255:21,0 chr2 85788546 . C . PASS END=85788546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 85788547 . G . LowGQ END=85788547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,5:26:0:26:0,0,582:41,0,255:18,0 chr2 85788548 . C . PASS END=85788550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,878:0,64,255:23,0 chr2 85788551 . T . LowGQ END=85788551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,6:26:0:26:0,0,557:36,0,255:19,0 chr2 85788574 . G . PASS END=85788574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 85788597 . G . LowGQ END=85788597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,523:1,0,255:18,0 chr2 85788604 . G . PASS END=85788604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,717:0,66,255:22,0 chr2 85788621 . C . PASS END=85788621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr2 85804770 . A . PASS END=85804771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:36,0 chr2 85804772 . G . PASS END=85804772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:33,0 chr2 85806132 . G . PASS END=85806136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 85806137 . A . PASS END=85806142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr2 85806143 . T . PASS END=85806143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 85806144 . G . PASS END=85806144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 85806145 . A . PASS END=85806145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr2 85806146 . A . PASS END=85806228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:29:0,87,983:0,87,255:40,0 chr2 85806229 . T . PASS END=85806265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,114,1800:0,114,255:40,0 chr2 85806266 . C T, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.794;ReadPosRankSum=1.176;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,24,0:0.522,0.000:46:9,7,0:13,17,0:47:85,0,47,185,185,185:255,0,255:21,0:5.0000e+01,8.7754e-05,4.9921e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,15,2,22:10,12,17,7 chr2 85806267 . A . PASS END=85806286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1215:0,98,255:38,0 chr2 85806287 . C . PASS END=85806290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1035:0,92,255:25,0 chr2 85806865 . C . PASS END=85806997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:34:0,80,1168:0,80,255:40,0 chr2 85808699 . T . PASS END=85808699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 85808700 . C . PASS END=85808736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,119,1673:0,119,255:40,0 chr2 85808737 . A G, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.399;ReadPosRankSum=5.397;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,30,0:0.536,0.000:56:11,11,0:15,19,0:48:85,0,50,1059,930,1989:255,0,255:26,0:5.0000e+01,6.7563e-05,5.2560e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,9,19,11:12,14,12,18 chr2 85808738 . A . PASS END=85808774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,127,255:40,0 chr2 85808775 . T . PASS END=85808833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,102,1530:0,102,255:40,0 chr2 85808834 . T . PASS END=85808839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:41:0,91,1530:0,91,255:36,0 chr2 85811614 . A . PASS END=85811616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:13,0 chr2 85818848 . G . PASS END=85818851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr2 85818852 . G . PASS END=85818852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:33,0 chr2 85818853 . A . PASS END=85818859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1189:0,88,255:38,0 chr2 85818860 . T . PASS END=85818860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1146:0,58,255:36,0 chr2 85818861 . T . PASS END=85818963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1215:0,86,255:40,0 chr2 85818964 . T . PASS END=85818982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr2 85818983 . A . PASS END=85818983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:20,0 chr2 85818984 . T . PASS END=85818985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 85820071 . A . PASS END=85820086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr2 85820087 . A . PASS END=85820102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,552:0,48,255:19,0 chr2 85820103 . G . PASS END=85820115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:22,0 chr2 85820116 . T . PASS END=85820116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 85820117 . G . PASS END=85820182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,808:0,62,255:26,0 chr2 85820183 . T . PASS END=85820183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 85820184 . G . PASS END=85820206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,845:0,69,255:23,0 chr2 85820207 . T . PASS END=85820207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 85820208 . C . PASS END=85820219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 85820220 . T . PASS END=85820222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 85820223 . C . PASS END=85820224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 85820225 . G . PASS END=85820250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:18,0 chr2 85820251 . G . PASS END=85820273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr2 85820274 . G . PASS END=85820280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 85822887 . A . PASS END=85822891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr2 85822892 . G . PASS END=85822915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:25,0 chr2 85822916 . C . PASS END=85822916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr2 85822917 . G . PASS END=85822923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,947:0,75,255:26,0 chr2 85822924 . C . PASS END=85822953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,942:0,84,255:29,0 chr2 85822954 . T . PASS END=85822955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 85822956 . C . PASS END=85822956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:24,0 chr2 85822957 . T . PASS END=85822972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,804:0,61,255:26,0 chr2 85823642 . G . PASS END=85823656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:24,0 chr2 85823657 . G . PASS END=85823657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 85823658 . A . PASS END=85823678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,870:0,72,255:25,0 chr2 85823679 . T . PASS END=85823772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1172:0,84,255:37,0 chr2 85823850 . T . PASS END=85823850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1031:0,63,255:29,0 chr2 85823851 . T . PASS END=85823884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1127:0,82,255:32,0 chr2 85823885 . A . PASS END=85823885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:29,0 chr2 85823886 . G . PASS END=85823898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1188:0,85,255:32,0 chr2 85823899 . A . PASS END=85823899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 85823900 . G . PASS END=85823920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1218:0,86,255:36,0 chr2 85823921 . C . PASS END=85823921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr2 85823922 . C . PASS END=85823943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1350:0,98,255:37,0 chr2 85823945 . A . PASS END=85823986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1181:0,88,255:37,0 chr2 85823987 . A . PASS END=85823987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:34,0 chr2 85823988 . G . PASS END=85824034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1203:0,86,255:35,0 chr2 85824035 . T . PASS END=85824035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:31,0 chr2 85824036 . T . PASS END=85824037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 85824038 . T . PASS END=85824042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:29,0 chr2 85824043 . T . PASS END=85824043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:27,0 chr2 85824044 . G . PASS END=85824048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:30,0 chr2 85824049 . A . PASS END=85824049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1182:0,66,255:26,0 chr2 85824050 . G . PASS END=85824054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1260:0,95,255:29,0 chr2 85824076 . C . PASS END=85824077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 85824078 . C T, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.336;ReadPosRankSum=-0.528;FractionInformativeReads=0.967;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:10,19,0:0.655,0.000:29:8,8,0:2,11,0:44:85,0,42,185,185,185:255,0,255:10,0:5.0000e+01,1.7111e-04,4.5313e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,3,9,10:5,5,8,11:85824078 chr2 85824079 . T . PASS END=85824083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:26,0 chr2 85824084 . G C, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.375;ReadPosRankSum=0.188;FractionInformativeReads=0.966;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:11,17,0:0.607,0.000:28:9,6,0:2,11,0:44:85,0,42,185,185,185:255,0,255:10,0:5.0000e+01,1.7111e-04,4.5313e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,3,8,9:6,5,7,10:85824078 chr2 85824085 . T . PASS END=85824092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,77,255:23,0 chr2 85824093 . G . PASS END=85824093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,978:0,43,255:22,0 chr2 85824094 . C . PASS END=85824103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 85824104 . A . PASS END=85824105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,828:0,42,255:20,0 chr2 85824106 . G . PASS END=85824106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:20,0 chr2 85824107 . C . PASS END=85824107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr2 85824108 . T . PASS END=85824116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 85824117 . T . PASS END=85824118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 85824119 . C . PASS END=85824119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85824120 . A . PASS END=85824120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,750:0,50,255:20,0 chr2 85824121 . T . PASS END=85824121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85824122 . G . PASS END=85824122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:19,0 chr2 85824123 . G . PASS END=85824124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85824125 . C . PASS END=85824125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 85824126 . T . PASS END=85824126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:18,0 chr2 85824127 . G . PASS END=85824127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr2 85824128 . C . PASS END=85824138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,68,255:25,0 chr2 85824139 . A . PASS END=85824164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,86,255:37,0 chr2 85824165 . G . PASS END=85824165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr2 85824166 . A . PASS END=85824319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:40:0,81,1429:0,81,255:40,0 chr2 85824568 . G . PASS END=85824688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:57:0,120,1800:0,158,255:40,0 chr2 85826199 . T . PASS END=85826206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 85826207 . T . PASS END=85826207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 85826208 . A . PASS END=85826213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:18,0 chr2 85826214 . G . PASS END=85826223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr2 85826224 . G . PASS END=85826224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 85826225 . C . PASS END=85826225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,615:0,30,255:19,0 chr2 85826226 . A . PASS END=85826230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:24,0 chr2 85826231 . T . PASS END=85826231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 85826232 . G . PASS END=85826238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr2 85826239 . G . PASS END=85826239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 85826240 . T . PASS END=85826240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 85826241 . G . PASS END=85826422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1103:0,80,255:40,0 chr2 85826423 . G . PASS END=85826429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 85826430 . G . PASS END=85826430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:23,0 chr2 85826431 . A . PASS END=85826440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,939:0,64,255:25,0 chr2 85826648 . T . PASS END=85826663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:32:0,92,1264:0,92,255:36,0 chr2 85826664 . A . PASS END=85826664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1270:0,78,255:34,0 chr2 85826665 . A . PASS END=85826734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1244:0,87,255:38,0 chr2 85826735 . A . PASS END=85826735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:34,0 chr2 85826736 . G . PASS END=85826767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1234:0,96,255:39,0 chr2 85826768 . G . PASS END=85826768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:35,0 chr2 85826769 . C . PASS END=85826776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:35,0 chr2 85826777 . G . PASS END=85826777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:31,0 chr2 85826778 . G . PASS END=85826780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:32,0 chr2 85826781 . G . PASS END=85826782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:66:35:0,66,1148:0,66,255:28,0 chr2 85826783 . C . PASS END=85826789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr2 85826790 . A . PASS END=85826791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 85826792 . C . PASS END=85826796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 85826797 . A . PASS END=85826825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,856:0,65,255:26,0 chr2 85827014 . C . PASS END=85827141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:35:0,90,1330:0,98,255:40,0 chr2 85827468 . C . PASS END=85827470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 85827471 . T . PASS END=85827471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 85827472 . G . PASS END=85827480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr2 85827481 . C . PASS END=85827481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr2 85827482 . A . PASS END=85827489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 85827490 . A . PASS END=85827491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 85827492 . T . PASS END=85827493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 85827494 . A . PASS END=85827494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 85827495 . G . PASS END=85827502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 85827503 . A . PASS END=85827503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:16,0 chr2 85827504 . G . PASS END=85827535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,568:0,51,255:17,0 chr2 85827623 . C . PASS END=85827631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,676:0,57,255:19,0 chr2 85827632 . C . PASS END=85827638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 85827639 . G . PASS END=85827639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 85827640 . C . PASS END=85827649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85827650 . A . PASS END=85827680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,629:0,41,255:19,0 chr2 85827681 . T . PASS END=85827681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 85828144 . C . PASS END=85828147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1135:0,93,255:32,0 chr2 85828148 . T . PASS END=85828148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 85828149 . G . PASS END=85828152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr2 85828153 . G . PASS END=85828153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:30,0 chr2 85828154 . G . PASS END=85828230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:33:0,85,1107:0,85,255:40,0 chr2 85828442 . T . PASS END=85828521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1318:0,92,255:39,0 chr2 85828522 . G . PASS END=85828522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:31,0 chr2 85828523 . C . PASS END=85828551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,99,1485:0,105,255:36,0 chr2 85828552 . T . PASS END=85828552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 85828553 . C . PASS END=85828602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1305:0,96,255:37,0 chr2 85828603 . T . PASS END=85828605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 85829007 . A . PASS END=85829071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:85:41:0,85,1496:0,85,255:40,0 chr2 85836068 . T . PASS END=85836187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:37:0,95,1530:0,95,255:40,0 chr2 85836188 . A . PASS END=85836188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1543:0,69,255:40,0 chr2 85836189 . C . PASS END=85836190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 85836558 . C . PASS END=85836698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,87,255:40,0 chr2 85836699 . G . PASS END=85836700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 85836701 . C . PASS END=85836705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 85836706 . A . PASS END=85836709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 85838446 . T . PASS END=85838456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:34:13:0,34,540:0,34,255:15,0 chr2 85838457 . T . PASS END=85838464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:17,0 chr2 85838465 . T . PASS END=85838481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr2 85838482 . G . PASS END=85838482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 85838483 . C . PASS END=85838502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,644:0,54,255:19,0 chr2 85838503 . G . PASS END=85838503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 85838504 . T . PASS END=85838504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 85838505 . A . PASS END=85838526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr2 85838527 . C . PASS END=85838570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,540:0,40,255:19,0 chr2 85838571 . C . PASS END=85838574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 85838575 . T . PASS END=85838575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 85838576 . A . PASS END=85838577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 85838578 . T . PASS END=85838578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 85838579 . C . PASS END=85838630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,872:0,64,255:25,0 chr2 85838631 . A . PASS END=85838631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,827:0,42,255:22,0 chr2 85838632 . A . PASS END=85838640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,854:0,72,255:24,0 chr2 85838641 . C . PASS END=85838641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 85838642 . G . PASS END=85838642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 85838643 . G . PASS END=85838643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 85838644 . A . PASS END=85838674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,967:0,65,255:26,1 chr2 85838675 . A . PASS END=85838676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,933:0,42,255:26,1 chr2 85838677 . A . PASS END=85838683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,895:0,78,255:26,0 chr2 85838684 . A . PASS END=85838685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 85838686 . A . PASS END=85838712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:25,0 chr2 85838713 . G . PASS END=85838713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 85838714 . G . PASS END=85838727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 85838728 . A . PASS END=85838758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 85838759 . G . PASS END=85838759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:14,0 chr2 85838760 . G . PASS END=85838789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 85838790 . C . PASS END=85838846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,823:0,65,255:26,0 chr2 85838847 . G . PASS END=85838891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:37,0 chr2 85838892 . T . PASS END=85838892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1287:0,62,255:35,0 chr2 85838893 . T . PASS END=85838909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:39:0,100,1344:0,100,255:40,0 chr2 85838931 . T . PASS END=85839066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1215:0,90,255:40,0 chr2 85839067 . T . PASS END=85839079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,74,255:26,0 chr2 85839080 . C . PASS END=85839092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:19,0 chr2 85839093 . C . PASS END=85839093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr2 85839094 . G . PASS END=85839096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 85839097 . C . PASS END=85839106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr2 85839107 . T . PASS END=85839107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 85839449 . A . PASS END=85839482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,102,1435:0,107,255:40,0 chr2 85843319 . A . PASS END=85843319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 85843320 . T . PASS END=85843324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 85843325 . G . PASS END=85843325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 85843326 . G . PASS END=85843347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:11,0 chr2 85843348 . C T, 49.80 PASS DP=12;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=2.637;FractionInformativeReads=0.917;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,5,0:0.455,0.000:11:4,2,0:2,3,0:48:85,0,50,171,214,385:166,0,197:6,0:4.9802e+01,6.7304e-05,5.3000e+01,1.7085e+02,2.4918e+02,3.8825e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,1,3,2:5,1,2,3 chr2 85843349 . G . PASS END=85843377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr2 85843378 . G . PASS END=85843379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,402:0,20,255:10,0 chr2 85843380 . C . PASS END=85843380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 85843381 . G . PASS END=85843383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 85843384 . G . PASS END=85843385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 85843386 . G . PASS END=85843389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 85843390 . C . PASS END=85843395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 85843396 . T . PASS END=85843398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 85843399 . C . PASS END=85843400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 85843401 . T . PASS END=85843414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 85843415 . G . PASS END=85843417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 85843418 . C . PASS END=85843418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 85843419 . G . PASS END=85843431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:17,0 chr2 85843432 . T . PASS END=85843432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 85843433 . G . PASS END=85843457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:19,0 chr2 85843458 . C . PASS END=85843463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 85843464 . G . PASS END=85843464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 85843465 . C . PASS END=85843492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,672:0,60,255:21,0 chr2 85843493 . G . PASS END=85843542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,524:0,45,255:19,0 chr2 85843543 . G . PASS END=85843543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 85843544 . C . PASS END=85843550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 85843551 . T . PASS END=85843564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 85843565 . G . PASS END=85843565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 85843566 . A . PASS END=85843575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 85843576 . G . PASS END=85843576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 85843577 . G . PASS END=85843586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 85846343 . C . PASS END=85846412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,120,1800:0,137,255:40,0 chr2 85848608 . G . PASS END=85848685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:38:0,84,1395:0,84,255:40,0 chr2 85848686 . T . PASS END=85848686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:30,0 chr2 85848687 . G . PASS END=85848702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr2 85850749 . C . PASS END=85850905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:32:0,89,1252:0,89,255:40,0 chr2 85852662 . T . PASS END=85852769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:36:0,93,1213:0,94,255:40,0 chr2 85852770 . C . PASS END=85852793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,959:0,65,255:26,0 chr2 85852794 . T . PASS END=85852814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:18:0,45,675:0,53,255:19,0 chr2 85857844 . G . PASS END=85857848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:25,0 chr2 85857849 . A . PASS END=85857873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 85857874 . T . PASS END=85857874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 85857875 . A . PASS END=85857879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 85857880 . C . PASS END=85857880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 85857881 . T . PASS END=85858069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:31:0,87,1174:0,88,255:40,0 chr2 85863176 . G . PASS END=85863253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:42:0,93,1447:0,93,255:40,0 chr2 85864492 . C . PASS END=85864559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,113,1574:0,113,255:40,0 chr2 85866326 . C . PASS END=85866331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,886:0,64,255:25,0 chr2 85866332 . G . PASS END=85866334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 85866335 . G . PASS END=85866335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,2 chr2 85866336 . A . PASS END=85866336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:7:31:0,7,909:0,7,255:28,2 chr2 85866337 . A . PASS END=85866337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:30,0 chr2 85866338 . A . PASS END=85866341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:31,0 chr2 85866342 . A . PASS END=85866342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,961:0,76,255:30,0 chr2 85866343 . G . PASS END=85866486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:31:0,83,1164:0,83,255:40,0 chr2 85866487 . G . PASS END=85866487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1504:0,60,255:40,0 chr2 85866488 . G . PASS END=85866508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:42:0,87,1423:0,87,255:40,0 chr2 85866509 . G . PASS END=85866509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1380:0,54,255:31,0 chr2 85866510 . A . PASS END=85866510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1424:0,87,255:32,0 chr2 85866511 . G . PASS END=85866511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1373:0,43,255:32,0 chr2 85866512 . A . PASS END=85866512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1344:0,76,255:33,0 chr2 85866513 . A . PASS END=85866514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,102,1427:0,104,255:34,0 chr2 85868099 . G . PASS END=85868241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:36:0,102,1530:0,104,255:40,0 chr2 85872071 . A . PASS END=85872091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr2 85872092 . C . PASS END=85872114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:33,0 chr2 85872115 . T . PASS END=85872115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr2 85872116 . A . PASS END=85872147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1162:0,83,255:34,0 chr2 85872148 . A . PASS END=85872148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1086:0,69,255:28,0 chr2 85872149 . C . PASS END=85872153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1225:0,86,255:31,0 chr2 85872154 . T . PASS END=85872154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1124:0,52,255:27,0 chr2 85872155 . G . PASS END=85872158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:29,0 chr2 85872159 . G . PASS END=85872162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 85872163 . G . PASS END=85872164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 85872165 . A . PASS END=85872185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr2 85872186 . C . PASS END=85872186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 85872187 . G . PASS END=85872194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 85872195 . G . PASS END=85872206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:18,0 chr2 85875053 . G . PASS END=85875139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,102,1416:0,102,255:40,0 chr2 85875884 . A . PASS END=85875931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,108,1628:0,108,255:40,0 chr2 85884459 . T . PASS END=85884459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr2 85884652 . C . PASS END=85884652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 85884682 . G . PASS END=85884682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 85884763 . G . PASS END=85884763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 85885020 . C . LowGQ END=85885020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,1:3:0:3:0,0,16:8,0,24:2,0 chr2 85885069 . G . PASS END=85885069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 85885337 . T . PASS END=85885337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,164,255:40,0 chr2 85885903 . C . PASS END=85885908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 85885909 . G . PASS END=85885920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,219:6,0 chr2 85885921 . C . PASS END=85885924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 85885925 . T . PASS END=85885925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 85885926 . G . PASS END=85885972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 85885973 . C . PASS END=85885978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:7,0 chr2 85888596 . T . PASS END=85888646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,878:0,62,255:26,0 chr2 85888647 . C . PASS END=85888659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr2 85889152 . C . PASS END=85889155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 85889156 . C . PASS END=85889167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,444:0,42,255:14,0 chr2 85889168 . G . PASS END=85889169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 85889170 . A . PASS END=85889170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr2 85889171 . T . PASS END=85889190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 85889191 . G . PASS END=85889232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,546:0,45,255:17,0 chr2 85889385 . T . PASS END=85889391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr2 85889392 . A . PASS END=85889392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,660:0,49,255:20,0 chr2 85889393 . C . PASS END=85889402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85890469 . C . PASS END=85890488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr2 85890489 . A . PASS END=85890499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:23,0 chr2 85890500 . G . PASS END=85890500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 85890501 . C . PASS END=85890515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,831:0,69,255:23,0 chr2 85890516 . G . PASS END=85890517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 85890518 . G . PASS END=85890577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:24,0 chr2 85890578 . T . PASS END=85890600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr2 85890601 . T . PASS END=85890602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 85890603 . C . PASS END=85890614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 85890787 . T . PASS END=85890808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,856:0,69,255:24,0 chr2 85890809 . G . PASS END=85890813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 85890814 . A . PASS END=85890814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 85890815 . C . PASS END=85890818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 85890819 . A . PASS END=85890819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 85890820 . G . PASS END=85890821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 85890822 . A . PASS END=85890822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 85890823 . C . PASS END=85890835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 85890836 . C . PASS END=85890836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:22,0 chr2 85890837 . A . PASS END=85890838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 85890839 . C . PASS END=85890839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr2 85890840 . T . PASS END=85890840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 85890841 . G . PASS END=85890841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 85890842 . G . PASS END=85890844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 85890845 . C . PASS END=85890845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 85890846 . A . PASS END=85890847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 85890848 . C . PASS END=85890848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 85890849 . A . PASS END=85890851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 85890852 . C . PASS END=85890852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:20,0 chr2 85890853 . G . PASS END=85890856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 85890857 . C . PASS END=85890858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 85890859 . G . PASS END=85890871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:22,0 chr2 85890872 . C . PASS END=85890919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,559:0,41,255:19,0 chr2 85890920 . C . PASS END=85890943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 85890944 . C . PASS END=85890944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 85890945 . T . PASS END=85890959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 85890960 . G . PASS END=85890970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 85890978 . G . PASS END=85890978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 85892412 . C . PASS END=85892417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr2 85892418 . A . PASS END=85892441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,685:0,60,255:23,0 chr2 85892442 . C . PASS END=85892442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 85892443 . A . PASS END=85892448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,861:0,69,255:26,0 chr2 85892449 . C . PASS END=85892451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 85892452 . C . PASS END=85892461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,941:0,67,255:27,0 chr2 85892462 . A . PASS END=85892463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 85892464 . T . PASS END=85892468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,931:0,64,255:26,0 chr2 85892469 . G . PASS END=85892472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 85892473 . G . PASS END=85892473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 85892474 . G . PASS END=85892475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 85892476 . A . PASS END=85892488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr2 85892489 . G . PASS END=85892490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 85892491 . T . PASS END=85892501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 85892516 . A . PASS END=85892516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 85892723 . C . PASS END=85892724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 85892729 . C . PASS END=85892729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 85892730 . T . PASS END=85892730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr2 85892731 . G . PASS END=85892731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 85892732 . T . PASS END=85892732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 85892733 . G . PASS END=85892754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr2 85892755 . G . PASS END=85892758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85892759 . G . PASS END=85892759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:25,0 chr2 85892760 . G . PASS END=85892761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 85892762 . C . PASS END=85892764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 85892765 . G . PASS END=85892773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr2 85892774 . A . PASS END=85892774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 85892775 . G . PASS END=85892780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:33,0 chr2 85892781 . A . PASS END=85892781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr2 85892782 . C . PASS END=85892903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1357:0,84,255:40,0 chr2 85892904 . A . PASS END=85892904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1259:0,75,255:34,0 chr2 85892905 . T . PASS END=85892913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1009:0,91,255:36,0 chr2 85892914 . A . PASS END=85892914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 85892915 . G . PASS END=85892917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr2 85893740 . A . PASS END=85893740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 85893741 . G A, 46.24 PASS DP=20;MQ=250.00;MQRankSum=3.566;ReadPosRankSum=1.664;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,7,0:0.350,0.000:20:8,5,0:5,2,0:45:81,0,50,248,436,684:211,0,255:13,0:4.6238e+01,1.2503e-04,5.3000e+01,2.4793e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,3,5,2:11,2,3,4 chr2 85893742 . T . PASS END=85893745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 85893746 . G . PASS END=85893746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 85893747 . T . PASS END=85893752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 85893753 . A . PASS END=85893753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 85893754 . A . PASS END=85893754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 85893755 . G . PASS END=85893757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85893758 . G . PASS END=85893761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85893762 . A . PASS END=85893764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 85893765 . A . PASS END=85893765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:18,0 chr2 85893766 . C . PASS END=85893766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85893767 . C . PASS END=85893778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 85893779 . G . PASS END=85893794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,684:0,57,255:19,0 chr2 85893795 . T . PASS END=85893795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr2 85893796 . T . PASS END=85893801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,720:0,44,255:17,0 chr2 85893802 . G . PASS END=85893802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 85893803 . G . PASS END=85893852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,566:0,45,255:19,0 chr2 85893853 . T . PASS END=85893865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,496:0,39,255:13,0 chr2 85893879 . G . PASS END=85893879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 85894229 . C . PASS END=85894245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr2 85894246 . T . PASS END=85894279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:24,0 chr2 85894280 . A . PASS END=85894282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 85894283 . C . PASS END=85894283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 85894284 . T . PASS END=85894300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,56,255:19,0 chr2 85894802 . G . PASS END=85894907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:33:0,93,1327:0,95,255:40,0 chr2 85894908 . A . PASS END=85894908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:32,0 chr2 85894909 . A . PASS END=85894926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:33,0 chr2 85894927 . C . PASS END=85894929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:25,0 chr2 85895240 . C . PASS END=85895243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 85895244 . G . PASS END=85895244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 85895245 . C . PASS END=85895262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:25,0 chr2 85895263 . G . LowGQ END=85895267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:0:27:0,0,798:0,0,255:27,3 chr2 85895268 . C . PASS END=85895277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 85895278 . A . PASS END=85895279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 85895280 . C . PASS END=85895286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:30,0 chr2 85895287 . A . PASS END=85895287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 85895288 . G . PASS END=85895300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr2 85895301 . A . PASS END=85895301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 85895302 . G . PASS END=85895302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 85895303 . C . PASS END=85895303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:25,0 chr2 85895304 . C . PASS END=85895304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:24,0 chr2 85895305 . A . PASS END=85895308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 85895309 . C . PASS END=85895309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 85895310 . A . PASS END=85895322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:25,0 chr2 85895323 . G . PASS END=85895323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 85895324 . G . PASS END=85895328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 85895329 . C . PASS END=85895329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 85895330 . C . PASS END=85895332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 85895333 . C . PASS END=85895333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 85895334 . T . PASS END=85895334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 85895335 . T . PASS END=85895342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:23:0,44,675:0,44,255:19,0 chr2 85895365 . C . PASS END=85895365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 85895837 . G . PASS END=85895837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 85921542 . A . PASS END=85921593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:34:0,92,1266:0,92,255:35,0 chr2 85922039 . G . PASS END=85922039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 85922040 . C . PASS END=85922041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 85922042 . T . PASS END=85922119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:30:0,80,1036:0,80,255:40,1 chr2 85922443 . G . PASS END=85922453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1113:0,90,255:32,0 chr2 85922454 . T . PASS END=85922454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:31,0 chr2 85922455 . C . PASS END=85922543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1166:0,89,255:40,0 chr2 85922544 . C . PASS END=85922546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 85923081 . G . PASS END=85923161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:88:37:0,88,1357:0,88,255:40,0 chr2 85923162 . G . PASS END=85923162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1291:0,79,255:37,0 chr2 85923163 . T . PASS END=85923179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1350:0,100,255:40,0 chr2 85924629 . A . PASS END=85924633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,796:0,69,255:25,0 chr2 85924634 . T . PASS END=85924634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 85924635 . G . PASS END=85924649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,923:0,75,255:26,0 chr2 85924650 . A . PASS END=85924654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr2 85924655 . G . PASS END=85924655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:27,0 chr2 85924656 . G . PASS END=85924656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 85924657 . T . PASS END=85924657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:26,0 chr2 85924658 . G . PASS END=85924658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:30,0 chr2 85924659 . T . PASS END=85924706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1174:0,84,255:38,0 chr2 85924707 . A . PASS END=85924707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:37,0 chr2 85924708 . G . PASS END=85924781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1202:0,86,255:40,0 chr2 85924782 . T . PASS END=85924790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr2 85924791 . C . PASS END=85924794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:25:0,57,855:0,75,255:19,0 chr2 85924795 . C . PASS END=85924796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 85924797 . A . PASS END=85924800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:53:23:0,53,810:0,53,255:18,0 chr2 85925521 . G . PASS END=85925521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 85925522 . C . PASS END=85925522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 85925523 . C . PASS END=85925528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:31,0 chr2 85925529 . A . PASS END=85925529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:30,0 chr2 85925530 . C . PASS END=85925530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 85925531 . C . PASS END=85925535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 85925536 . C . PASS END=85925536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr2 85925537 . A . PASS END=85925559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1141:0,82,255:32,0 chr2 85925560 . T . PASS END=85925560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 85925561 . G . PASS END=85925566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1117:0,90,255:30,0 chr2 85925567 . C . PASS END=85925567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 85925568 . T . PASS END=85925570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 85925687 . G . PASS END=85925844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:41:0,93,1433:0,93,255:40,0 chr2 85925845 . T . PASS END=85925845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1205:0,56,255:34,0 chr2 85925846 . C . PASS END=85925878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,106,1361:0,106,255:40,0 chr2 85925879 . G . PASS END=85925879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1223:0,54,255:34,0 chr2 85925880 . C . PASS END=85925891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:40:0,89,1261:0,89,255:40,0 chr2 85925892 . C . PASS END=85925892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1250:0,73,255:34,0 chr2 85925893 . T . PASS END=85925936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:37,0 chr2 85925937 . G . PASS END=85925940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:22,0 chr2 85925941 . T . PASS END=85925941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:20,0 chr2 85925942 . G . PASS END=85925949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:22,0 chr2 85925950 . T . PASS END=85925950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 85925951 . C . PASS END=85925956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 85981313 . A . PASS END=85981317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 85981318 . G . PASS END=85981340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr2 85981341 . G . PASS END=85981350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 85981351 . G . PASS END=85981351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr2 85981352 . A . PASS END=85981376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,521:0,48,255:17,0 chr2 85981377 . G . PASS END=85981380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 85981381 . T . PASS END=85981381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 85981382 . A . PASS END=85981384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 85981385 . A . PASS END=85981385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,691:0,52,255:20,0 chr2 85981386 . A . PASS END=85981395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 85981396 . G . PASS END=85981396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 85981397 . A . PASS END=85981413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,782:0,63,255:21,0 chr2 85981414 . G . PASS END=85981425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 85981426 . C . PASS END=85981426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 85981427 . G . PASS END=85981427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 85981428 . G . PASS END=85981438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,884:0,69,255:23,0 chr2 85981439 . T . PASS END=85981439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 85981440 . T . PASS END=85981451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:25,0 chr2 85981452 . T . PASS END=85981452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 85981453 . G . PASS END=85981471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr2 85981472 . G . PASS END=85981472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 85981473 . C . PASS END=85981480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 85981481 . A . PASS END=85981481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr2 85981482 . C . PASS END=85981484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:22,0 chr2 85981485 . A . PASS END=85981486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,691:0,49,255:21,0 chr2 85981487 . G . PASS END=85981492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 85981493 . C . PASS END=85981493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 85981494 . G . PASS END=85981496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 85981497 . A . PASS END=85981537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 85981538 . G . PASS END=85981539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 85981540 . G . PASS END=85981555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 85981556 . C . PASS END=85981556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 85981557 . C . PASS END=85981561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,570:0,51,255:17,0 chr2 85981562 . G . PASS END=85981565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:17,0 chr2 85981566 . C . PASS END=85981567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 85981568 . C . PASS END=85981577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:36:15:0,36,540:0,41,255:13,0 chr2 85981578 . G . PASS END=85981584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 85981585 . C . PASS END=85981594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 85981595 . G . PASS END=85981606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 85981607 . T . PASS END=85981607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 85981608 . C . PASS END=85981609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 85981610 . C . PASS END=85981610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr2 85981611 . G . PASS END=85981625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,480:0,42,255:15,0 chr2 85981626 . C . PASS END=85981626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 85981627 . C . PASS END=85981630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 85981631 . G . PASS END=85981631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 85981632 . C . PASS END=85981636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 85981637 . A . PASS END=85981637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 85981638 . A . PASS END=85981671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,507:0,42,255:18,0 chr2 85981672 . A . PASS END=85981672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,605:0,21,255:16,0 chr2 85981673 . C . PASS END=85981673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 85981674 . T . PASS END=85981674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 85981675 . C . PASS END=85981680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 85981681 . G . PASS END=85981681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr2 85981682 . C . PASS END=85981683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 85981684 . G . PASS END=85981684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:16,0 chr2 85981685 . C . PASS END=85981689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:18,0 chr2 85981690 . G . PASS END=85981690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:17,0 chr2 85981691 . C . PASS END=85981710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,629:0,41,255:19,0 chr2 85981711 . G . PASS END=85981711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr2 85981712 . A . PASS END=85981712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 85981713 . G . PASS END=85981715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85981716 . A . PASS END=85981720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr2 85981721 . C . PASS END=85981723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 85981724 . G . PASS END=85981732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 85981733 . G . PASS END=85981735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 85981736 . G . PASS END=85981736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:17,0 chr2 85981737 . C . PASS END=85981740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 85981741 . G . PASS END=85981754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 85981755 . C . PASS END=85981755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 85981756 . G . PASS END=85981760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 85981761 . T C, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.937;ReadPosRankSum=2.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,14,0:0.609,0.000:23:5,9,0:4,5,0:47:85,0,48,501,322,823:255,0,255:8,0:5.0000e+01,8.1024e-05,5.0622e+01,4.5000e+02,3.5666e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,9,5:8,1,6,8 chr2 85981762 . G . PASS END=85981769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:22,0 chr2 85981770 . G . PASS END=85981770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 85981771 . C . PASS END=85981792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr2 85981793 . G . PASS END=85981796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 85981797 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=3.889;ReadPosRankSum=0.827;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,16,0:0.667,0.000:24:4,9,0:4,7,0:46:85,0,45,506,281,786:255,0,238:6,0:5.0000e+01,1.1985e-04,4.7542e+01,4.5000e+02,3.1529e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,6,11,5:6,2,8,8 chr2 85981798 . C . PASS END=85981814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr2 85981815 . C . PASS END=85981815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85981816 . C . PASS END=85981816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85981817 . C . PASS END=85981821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85981822 . A . PASS END=85981834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 85981835 . C . PASS END=85981864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr2 85981865 . A . PASS END=85981865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85981866 . C . PASS END=85981869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 85981870 . C . PASS END=85981870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 85981871 . C . PASS END=85981914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:47:17:0,47,577:0,47,255:19,0 chr2 85981915 . T . PASS END=85981915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 85981916 . A . PASS END=85981931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 85981932 . C . PASS END=85981932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 85981933 . C . PASS END=85981941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 85981942 . T . PASS END=85981942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:14,0 chr2 85981943 . A . PASS END=85981953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:15,0 chr2 85981954 . G . PASS END=85981954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 85981955 . G . PASS END=85981960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 85981961 . G . PASS END=85981961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 85981962 . C . PASS END=85981962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 85981963 . G . PASS END=85981965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 85981966 . T . PASS END=85981966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 85981967 . G . PASS END=85981968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 85981969 . C . PASS END=85981969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 85981970 . G . PASS END=85981984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr2 85981985 . A . PASS END=85981985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr2 85981986 . A . PASS END=85981991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 85981992 . T . PASS END=85981992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 85981993 . G . PASS END=85982002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 85982003 . C . PASS END=85982010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 85982011 . C . PASS END=85982011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr2 85982012 . C . PASS END=85982012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 85982013 . T . PASS END=85982013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 85982014 . G . PASS END=85982018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 85982019 . A . PASS END=85982031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 85982032 . G . PASS END=85982044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 85982045 . A . PASS END=85982045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 85982046 . C . PASS END=85982057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 85982058 . C . PASS END=85982080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr2 85991114 . G . PASS END=85991118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:25,0 chr2 85991119 . G . PASS END=85991197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1072:0,82,255:40,0 chr2 85991198 . C . PASS END=85991198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1402:0,66,255:40,0 chr2 85991199 . T . PASS END=85991236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,101,1368:0,101,255:40,0 chr2 85991237 . A . PASS END=85991237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1311:0,73,255:35,0 chr2 85991238 . G . PASS END=85991238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr2 85991239 . C . PASS END=85991239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1199:0,73,255:35,0 chr2 85991240 . T . PASS END=85991246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:41:0,89,1204:0,89,255:40,0 chr2 85991247 . A . LowGQ END=85991247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:0:41:0,0,1049:5,0,255:34,0 chr2 85991248 . G . PASS END=85991261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,87,255:39,0 chr2 85991262 . G . PASS END=85991262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1006:0,71,255:25,0 chr2 85991263 . C . PASS END=85991275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 85991276 . C . PASS END=85991302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,937:0,65,255:26,0 chr2 85991303 . A . PASS END=85991305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:27:0,48,720:0,65,255:19,0 chr2 86007496 . G . PASS END=86007519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:58:0,120,1800:0,147,255:40,0 chr2 86011726 . G . PASS END=86011752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,229,255:40,0 chr2 86014008 . G . PASS END=86014013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,150,255:40,0 chr2 86066266 . C . PASS END=86066266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 86066291 . C . PASS END=86066291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 86066317 . C . PASS END=86066317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 86066323 . G . PASS END=86066323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr2 86066511 . C . PASS END=86066511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 86066589 . G . PASS END=86066589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr2 86066618 . G . PASS END=86066618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 86066658 . C . PASS END=86066658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr2 86066660 . G . PASS END=86066660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 86066812 . C . PASS END=86066812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 86066835 . C . PASS END=86066835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 86066852 . A . PASS END=86066852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 86066855 . G . PASS END=86066855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 86066904 . T . PASS END=86066904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 86066912 . C . PASS END=86066912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 86066923 . G . PASS END=86066923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 86066944 . G . PASS END=86066944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,105,1575:0,135,255:35,0 chr2 86067007 . C . PASS END=86067007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:40:0,87,1432:0,87,255:33,0 chr2 86067120 . G . PASS END=86067120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,151,255:40,0 chr2 86067126 . A . PASS END=86067127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,151,255:40,0 chr2 86067198 . T . PASS END=86067198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 86067267 . T . PASS END=86067296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1344:0,98,255:40,0 chr2 86067297 . A . PASS END=86067297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1346:0,70,255:39,0 chr2 86067298 . T . PASS END=86067515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1215:0,89,255:40,0 chr2 86071513 . A . PASS END=86071513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 86071519 . C . PASS END=86071526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 86071527 . G . PASS END=86071527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr2 86071528 . G . PASS END=86071549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,786:0,63,255:26,0 chr2 86071550 . T . PASS END=86071591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,986:0,81,255:37,0 chr2 86071592 . A . PASS END=86071592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:32,0 chr2 86071593 . C . PASS END=86071602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1241:0,86,255:33,0 chr2 86071603 . A . PASS END=86071603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,987:0,66,255:28,0 chr2 86071604 . A . PASS END=86071604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 86071605 . T . PASS END=86071605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:29,0 chr2 86071606 . C . PASS END=86071616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 86071617 . T . PASS END=86071617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr2 86071618 . T . PASS END=86071627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 86071628 . G . PASS END=86071638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr2 86071639 . T . PASS END=86071640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 86071641 . C . PASS END=86071641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr2 86071642 . C . PASS END=86071649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,966:0,81,255:28,0 chr2 86071650 . T . PASS END=86071666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,908:0,61,255:26,0 chr2 86071667 . A . PASS END=86071677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:22:0,51,765:0,55,255:18,0 chr2 86073485 . A . PASS END=86073485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 86073500 . C . PASS END=86073681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:85:40:0,85,1377:0,85,255:40,1 chr2 86073682 . T . PASS END=86073682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:33,0 chr2 86073683 . T . PASS END=86073686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1485:0,117,255:33,0 chr2 86074589 . T . PASS END=86074596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,493:0,48,255:16,0 chr2 86074597 . T . PASS END=86074597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 86074598 . A . PASS END=86074602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:17,0 chr2 86074603 . C . PASS END=86074603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 86074604 . C . PASS END=86074605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr2 86074606 . T . PASS END=86074606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 86074607 . G . PASS END=86074619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 86074620 . G . PASS END=86074620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 86074621 . T . PASS END=86074625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 86074626 . A . PASS END=86074637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr2 86074638 . C . PASS END=86074638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr2 86074639 . C . PASS END=86074669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:24,0 chr2 86074670 . A . PASS END=86074670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 86074671 . G . PASS END=86074671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 86074672 . C . PASS END=86074673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 86074674 . G . PASS END=86074674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr2 86074675 . T . PASS END=86074685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 86074984 . C . PASS END=86074989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 86074990 . A . PASS END=86074990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 86074991 . C . PASS END=86075002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,493:0,42,255:17,0 chr2 86075003 . G . PASS END=86075003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 86075004 . G . PASS END=86075004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,721:0,32,255:20,0 chr2 86075005 . T . PASS END=86075006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:21,0 chr2 86075007 . C . PASS END=86075008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 86075009 . G . PASS END=86075016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr2 86075017 . C . PASS END=86075018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 86075019 . C . PASS END=86075023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr2 86075024 . C . PASS END=86075025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 86075026 . A . PASS END=86075054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,64,255:27,0 chr2 86075055 . A . PASS END=86075055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 86075056 . A . PASS END=86075058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 86075059 . A . PASS END=86075069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 86075070 . A . PASS END=86075070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 86075071 . C . PASS END=86075078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 86075079 . G . PASS END=86075079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 86075080 . G . PASS END=86075100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:29,0 chr2 86075101 . T . PASS END=86075101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:27,0 chr2 86075102 . C . PASS END=86075327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:29:0,82,1049:0,82,255:40,0 chr2 86075484 . T . PASS END=86075504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 86077811 . T . PASS END=86077847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,509:0,48,255:19,0 chr2 86077848 . G . PASS END=86077878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr2 86077879 . T . PASS END=86077879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 86077880 . G . PASS END=86077884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 86077885 . C . PASS END=86077908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,50,255:19,0 chr2 86077909 . C . PASS END=86077915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 86077916 . G . PASS END=86077916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 86077917 . A . PASS END=86077928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 86077929 . C . PASS END=86077930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,449:0,23,255:12,0 chr2 86077931 . G . PASS END=86077931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 86077932 . C . PASS END=86077932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 86077933 . C . PASS END=86077933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 86077934 . A . PASS END=86077934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:11,0 chr2 86077935 . G . PASS END=86077935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 86077936 . G . LowGQ END=86077937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:13:0,0,341:0,0,255:10,0 chr2 86077938 . C . PASS END=86077938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 86077939 . T . LowGQ END=86077939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr2 86077940 . C . PASS END=86077947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 86077948 . G . PASS END=86077948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr2 86077949 . A . PASS END=86077950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 86077951 . G . PASS END=86077951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 86077952 . C . PASS END=86077952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr2 86077953 . T . PASS END=86077953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 86077954 . G . PASS END=86077954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 86077955 . C . PASS END=86077957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 86078714 . T . PASS END=86078715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 86078716 . A . PASS END=86078716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 86078717 . A . PASS END=86078758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:22,0 chr2 86078759 . T . PASS END=86078762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 86078763 . C . PASS END=86078766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 86078767 . T . PASS END=86078771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 86078772 . C . PASS END=86078773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86078774 . T . PASS END=86078789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 86078790 . A . PASS END=86078790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 86078791 . G . PASS END=86078805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:17,0 chr2 86078806 . C . PASS END=86078806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:14,0 chr2 86078807 . G . PASS END=86078823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 86078824 . G . PASS END=86078824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 86078825 . A . PASS END=86078826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:14,0 chr2 86079983 . C . PASS END=86079988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:4,0 chr2 86079989 . G . LowGQ END=86079989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 86079990 . A . PASS END=86079990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,217:5,0 chr2 86079991 . T . PASS END=86079991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 86079992 . A . PASS END=86080001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr2 86080002 . G . PASS END=86080021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:9,0 chr2 86080022 . G . PASS END=86080026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 86080027 . A . PASS END=86080027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 86080028 . A . PASS END=86080036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 86080037 . A . PASS END=86080037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 86080038 . A . PASS END=86080047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 86080048 . T . PASS END=86080112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr2 86080113 . A . PASS END=86080115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 86080116 . G . PASS END=86080118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 86080119 . T . PASS END=86080147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 86080148 . G . PASS END=86080148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 86080149 . A . PASS END=86080214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr2 86080217 . T . PASS END=86080222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 86085365 . T . PASS END=86085366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 86085367 . A . PASS END=86085367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 86085368 . G . PASS END=86085370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr2 86088302 . A . PASS END=86088302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 86088304 . C . PASS END=86088310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,167,255:40,0 chr2 86088311 . T C, 47.84 PASS DP=62;MQ=250.00;MQRankSum=6.669;ReadPosRankSum=4.929;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,26,0:0.419,0.000:62:15,15,0:21,11,0:47:83,0,50,914,1259,2172:255,0,255:35,0:4.7839e+01,9.3190e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,17,20,6:24,12,15,11 chr2 86088312 . G . PASS END=86088348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:63:0,120,1800:0,189,255:40,0 chr2 86088349 . T . PASS END=86088415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,173,255:40,0 chr2 86090485 . T . PASS END=86090608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:34:0,81,1215:0,98,255:40,0 chr2 86090615 . A . PASS END=86090615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 86094728 . G . PASS END=86094740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:41:0,90,1434:0,90,255:39,0 chr2 86097320 . C . PASS END=86097355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1271:0,89,255:35,0 chr2 86097356 . T . PASS END=86097356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1156:0,63,255:32,0 chr2 86097357 . T . PASS END=86097357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 86097358 . T . PASS END=86097358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1161:0,47,255:30,0 chr2 86097359 . G . PASS END=86097375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1180:0,83,255:33,0 chr2 86097376 . C . PASS END=86097376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 86097377 . A . PASS END=86097377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 86097378 . G . PASS END=86097381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr2 86115946 . C . PASS END=86115958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 86115959 . G . LowGQ END=86115959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 86115960 . T . PASS END=86115966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 86115967 . G . PASS END=86115985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,78:0,6,78:3,0 chr2 86115986 . G . PASS END=86115992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 86115993 . A . PASS END=86115997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 86115998 . G . PASS END=86116006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 86116007 . A . PASS END=86116007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 86116008 . G . PASS END=86116021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr2 86116022 . T . PASS END=86116022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:10,0 chr2 86116023 . C . PASS END=86116027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr2 86116028 . T . PASS END=86116028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 86116043 . G . PASS END=86116043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 86116071 . C . PASS END=86116071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 86116081 . C . PASS END=86116081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 86116119 . C . PASS END=86116119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 86116123 . C . PASS END=86116123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 86116127 . C . PASS END=86116127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr2 86116130 . C . PASS END=86116131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr2 86120931 . T . PASS END=86120941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 86120942 . C . PASS END=86120942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:25,0 chr2 86120943 . T . PASS END=86120944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 86120945 . T . PASS END=86120945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,959:0,32,255:25,0 chr2 86120946 . T . PASS END=86120951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 86120952 . T . PASS END=86120954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 86120955 . A . PASS END=86120956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 86120957 . T . PASS END=86120959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 86120960 . T . PASS END=86120960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr2 86120961 . G . PASS END=86120970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:29,0 chr2 86120971 . C . PASS END=86120971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 86120972 . C . PASS END=86120972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr2 86120973 . T . PASS END=86120973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,958:0,59,255:29,0 chr2 86120974 . G . PASS END=86120976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 86120977 . A . PASS END=86120977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr2 86120978 . C . PASS END=86120992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,969:0,90,255:31,0 chr2 86120993 . A . PASS END=86120993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 86120994 . G . PASS END=86120994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 86120995 . G . PASS END=86120995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 86120996 . C . PASS END=86121001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 86121002 . G . PASS END=86121011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,73,255:26,0 chr2 86121012 . C . PASS END=86121022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:24:0,51,765:0,56,255:19,0 chr2 86121023 . C . PASS END=86121023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:17,0 chr2 86121024 . C . PASS END=86121029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:18,0 chr2 86121030 . A . PASS END=86121039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:36:17:0,36,540:0,41,255:13,0 chr2 86121040 . C . PASS END=86121041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 86121042 . G . PASS END=86121046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 86121047 . C . PASS END=86121051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:9,0 chr2 86254546 . C . PASS END=86254646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,101,1354:0,101,255:40,0 chr2 86255008 . C . PASS END=86255149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:90:42:0,90,1499:0,90,255:40,0 chr2 86255150 . A . PASS END=86255150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1353:0,52,255:33,0 chr2 86255151 . T . PASS END=86255172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:38,0 chr2 86255717 . C . PASS END=86255728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86255729 . A . PASS END=86255739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,520:0,43,255:18,0 chr2 86255740 . A . PASS END=86255740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr2 86255741 . T . PASS END=86255749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr2 86255750 . C . PASS END=86255784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:24,0 chr2 86255785 . T . PASS END=86255785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 86255786 . T . PASS END=86255796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr2 86255797 . T . PASS END=86255797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 86255798 . G . PASS END=86255812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 86255813 . A . PASS END=86255829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr2 86255830 . A . PASS END=86255830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 86255831 . G . PASS END=86255834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:16,0 chr2 86257319 . C . PASS END=86257487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:97:38:0,97,1327:0,97,255:40,0 chr2 86257488 . T . PASS END=86257488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1368:0,79,255:40,0 chr2 86257489 . T . PASS END=86257513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:38:0,93,1395:0,101,255:40,0 chr2 86257514 . T . PASS END=86257514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:30,0 chr2 86257515 . G . PASS END=86257519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1215:0,89,255:30,0 chr2 86258453 . C . PASS END=86258458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 86258459 . C . PASS END=86258467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 86258468 . C . PASS END=86258492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,45,255:19,0 chr2 86258493 . T . PASS END=86258494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 86258495 . T . PASS END=86258495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,719:0,47,255:19,0 chr2 86258496 . A . PASS END=86258508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 86258509 . T . PASS END=86258509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:19,0 chr2 86258510 . C . PASS END=86258516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 86258517 . A . PASS END=86258519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 86258520 . G . PASS END=86258538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 86258539 . T . PASS END=86258539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr2 86258540 . G . PASS END=86258586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,651:0,51,255:19,0 chr2 86258587 . G . PASS END=86258595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr2 86258596 . G . PASS END=86258614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,942:0,81,255:30,0 chr2 86258615 . C . PASS END=86258615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr2 86258616 . T . PASS END=86258626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr2 86258627 . T . PASS END=86258631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:33,0 chr2 86258632 . C . PASS END=86258634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1318:0,102,255:34,0 chr2 86258635 . C . PASS END=86258635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 86258636 . C . PASS END=86258638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:35,0 chr2 86258639 . T . PASS END=86258639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:34,0 chr2 86258640 . T . PASS END=86258750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:37:0,87,1268:0,87,255:40,0 chr2 86258751 . T . PASS END=86258751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1219:0,70,255:29,0 chr2 86258752 . A . PASS END=86258753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,102,1530:0,123,255:34,0 chr2 86258754 . T . PASS END=86258754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1190:0,37,255:30,0 chr2 86258755 . C . PASS END=86258758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:91:36:0,91,1159:0,91,255:34,0 chr2 86258763 . C . PASS END=86258763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 86259395 . C . PASS END=86259405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1394:0,98,255:39,0 chr2 86259406 . G . PASS END=86259442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:41:0,90,1304:0,90,255:40,0 chr2 86259443 . C T, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.852;ReadPosRankSum=-0.458;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,25,0:0.532,0.000:47:11,14,0:11,11,0:48:85,0,50,861,758,1619:255,0,255:19,0:5.0000e+01,6.7045e-05,5.2639e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,13,15,10:10,12,14,11 chr2 86259444 . C . PASS END=86259480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:39:0,90,1388:0,90,255:40,0 chr2 86259481 . C . PASS END=86259488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1327:0,95,255:37,0 chr2 86259489 . T . PASS END=86259489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:33,0 chr2 86259490 . C . PASS END=86259502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,92,255:35,0 chr2 86259503 . T . PASS END=86259503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:31,0 chr2 86259504 . C . PASS END=86259505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr2 86260784 . C . PASS END=86260910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:37:0,96,1440:0,111,255:40,0 chr2 86265823 . C . PASS END=86265980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:36:0,105,1335:0,108,255:40,0 chr2 86266450 . C . PASS END=86266560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:37:0,81,1374:0,81,255:40,0 chr2 86266561 . G . PASS END=86266561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:33,0 chr2 86266562 . G . PASS END=86266585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:34,0 chr2 86267515 . C . PASS END=86267646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1180:0,83,255:40,0 chr2 86267647 . G . PASS END=86267667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:24:0,61,864:0,61,255:26,0 chr2 86267668 . A . PASS END=86267668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 86267669 . G . PASS END=86267672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 86267673 . G . PASS END=86267673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,835:0,56,255:20,0 chr2 86267674 . G . PASS END=86267678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 86267679 . C . PASS END=86267682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 86269012 . C . PASS END=86269012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 86269013 . T . PASS END=86269013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1192:0,50,255:32,0 chr2 86269014 . G . PASS END=86269125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:35:0,88,1064:0,88,255:40,0 chr2 86269126 . T . PASS END=86269162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,124,255:40,0 chr2 86269163 . C T, 49.16 PASS DP=47;MQ=250.00;MQRankSum=5.831;ReadPosRankSum=3.541;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,21,0:0.447,0.000:47:12,8,0:14,13,0:48:84,0,50,751,871,1622:255,0,255:23,0:4.9164e+01,7.4293e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,19,6,15:13,13,11,10 chr2 86269164 . G . PASS END=86269200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,104,255:40,0 chr2 86269201 . T . PASS END=86269210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:30:0,66,990:0,68,255:24,0 chr2 86269211 . A . PASS END=86269211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:20,0 chr2 86269212 . C . PASS END=86269213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:21,0 chr2 86269214 . A . PASS END=86269214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:18,0 chr2 86269215 . C . PASS END=86269226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr2 86270097 . C . PASS END=86270097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 86270098 . T . PASS END=86270099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 86270100 . C . PASS END=86270100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 86270101 . T . PASS END=86270104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:24,0 chr2 86270105 . T . PASS END=86270115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 86270116 . C . PASS END=86270116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 86270117 . G . PASS END=86270120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1057:0,87,255:30,0 chr2 86270121 . A . PASS END=86270121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr2 86270122 . T . PASS END=86270138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1066:0,90,255:31,0 chr2 86270139 . A . PASS END=86270139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:30,0 chr2 86270140 . A . PASS END=86270140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 86270141 . G . PASS END=86270142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 86270143 . T . PASS END=86270143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 86270144 . T . PASS END=86270144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 86270145 . C . PASS END=86270146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 86270147 . G . PASS END=86270147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 86270148 . G . PASS END=86270159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1225:0,86,255:33,0 chr2 86270160 . T . PASS END=86270160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:31,0 chr2 86270161 . T . PASS END=86270178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1133:0,82,255:32,0 chr2 86270179 . T . PASS END=86270179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1062:0,44,255:25,0 chr2 86270180 . A . PASS END=86270191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1157:0,82,255:29,0 chr2 86270192 . C . PASS END=86270193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr2 86270194 . C . PASS END=86270195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 86270196 . T . PASS END=86270196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,855:0,57,255:25,0 chr2 86270197 . C . PASS END=86270205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,993:0,80,255:32,0 chr2 86270206 . A . PASS END=86270206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 86270207 . G . PASS END=86270291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1153:0,80,255:38,0 chr2 86270292 . A . PASS END=86270292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:30,0 chr2 86270293 . T . PASS END=86270312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr2 86270313 . T . PASS END=86270318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,76,255:27,0 chr2 86271262 . C . PASS END=86271403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1202:0,83,255:40,0 chr2 86271404 . C . PASS END=86271405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 86271406 . C . PASS END=86271409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 86271410 . A . PASS END=86271427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,906:0,61,255:26,0 chr2 86272393 . C . PASS END=86272393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 86272401 . C . PASS END=86272410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:33:0,88,1171:0,88,255:38,0 chr2 86272411 . A . PASS END=86272411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1272:0,62,255:36,0 chr2 86272412 . G . PASS END=86272483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:37:0,97,1343:0,97,255:40,0 chr2 86272740 . A . PASS END=86272851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:34:0,87,1264:0,89,255:40,0 chr2 86272852 . C . PASS END=86272852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:28,0 chr2 86272853 . T . PASS END=86272862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:29,0 chr2 86272863 . C . PASS END=86272863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 86272864 . A . PASS END=86272864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:25,0 chr2 86272865 . G . PASS END=86272865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 86272866 . T . PASS END=86272866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 86272867 . T . PASS END=86272881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:24,0 chr2 86272882 . A . PASS END=86272892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 86274288 . C . PASS END=86274301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,899:0,75,255:25,0 chr2 86274302 . C . PASS END=86274302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 86274303 . A . PASS END=86274303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:26,0 chr2 86274304 . G . PASS END=86274313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 86274314 . T . PASS END=86274314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 86274315 . G . PASS END=86274320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:30,0 chr2 86274321 . C . PASS END=86274323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1092:0,74,255:26,0 chr2 86274324 . C . PASS END=86274325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 86274326 . G . PASS END=86274329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1100:0,63,255:26,0 chr2 86274330 . C . PASS END=86274330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 86274331 . A . PASS END=86274334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1023:0,71,255:26,0 chr2 86274335 . T . PASS END=86274342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 86274343 . C . PASS END=86274347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 86274348 . C . PASS END=86274348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:24,0 chr2 86274349 . T . PASS END=86274374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr2 86274375 . A . PASS END=86274377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 86274378 . C . PASS END=86274381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 86274382 . C . PASS END=86274382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 86274383 . A . PASS END=86274386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr2 86276007 . C . PASS END=86276137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:32:0,81,1143:0,81,255:40,0 chr2 86276138 . C . PASS END=86276138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr2 86276139 . T . PASS END=86276141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 86276142 . C . PASS END=86276142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr2 86276143 . A . PASS END=86276147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr2 86276148 . T . PASS END=86276165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,976:0,60,255:26,0 chr2 86276283 . C . PASS END=86276283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 86276284 . T . PASS END=86276284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 86276285 . G . PASS END=86276365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1143:0,85,255:34,0 chr2 86279940 . C . PASS END=86279950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,713:0,57,255:19,0 chr2 86279951 . C . PASS END=86279961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 86279962 . C . PASS END=86279962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:21,0 chr2 86279963 . T . PASS END=86279974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,978:0,69,255:26,0 chr2 86279975 . G . PASS END=86279979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 86279980 . G . PASS END=86279993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 86279994 . A . PASS END=86280001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1047:0,81,255:30,0 chr2 86280002 . A . PASS END=86280002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 86280003 . C . PASS END=86280003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 86280004 . C . PASS END=86280010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 86280011 . C . PASS END=86280025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:30,0 chr2 86280026 . T . PASS END=86280027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 86280028 . G . PASS END=86280029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr2 86280030 . T . PASS END=86280030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr2 86280031 . C . PASS END=86280032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 86280033 . C . PASS END=86280033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 86280034 . A . PASS END=86280085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1074:0,86,255:33,0 chr2 86280086 . A . PASS END=86280086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:29,0 chr2 86280087 . G . PASS END=86280094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:30,0 chr2 86280095 . C . PASS END=86280095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 86280096 . A . PASS END=86280097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 86280098 . A . PASS END=86280098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 86280099 . G . PASS END=86280100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 86280101 . A . PASS END=86280111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,897:0,67,255:26,0 chr2 86280112 . C . PASS END=86280123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:50:22:0,50,765:0,50,255:19,0 chr2 86281263 . C . PASS END=86281267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 86281268 . A . PASS END=86281268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr2 86281269 . C . PASS END=86281269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 86281270 . T . PASS END=86281270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 86281271 . C . PASS END=86281288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1148:0,93,255:36,0 chr2 86281289 . T . PASS END=86281289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:35,0 chr2 86281290 . A . PASS END=86281392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,89,255:40,0 chr2 86281393 . A . PASS END=86281410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:25,0 chr2 86281411 . A . PASS END=86281411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 86281412 . C . PASS END=86281412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 86292397 . C . PASS END=86292404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 86292405 . C . PASS END=86292405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 86292406 . T . PASS END=86292406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 86292407 . G . PASS END=86292407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 86292408 . T . PASS END=86292420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 86292421 . G . PASS END=86292421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 86292422 . G . PASS END=86292430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,839:0,66,255:23,0 chr2 86292431 . A . PASS END=86292431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 86292432 . T . PASS END=86292450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,785:0,72,255:26,0 chr2 86292451 . C . PASS END=86292463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr2 86292464 . T . PASS END=86292464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 86292465 . T . PASS END=86292505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1177:0,80,255:33,0 chr2 86292506 . C . PASS END=86292506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr2 86292507 . G . PASS END=86292552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1155:0,80,255:32,0 chr2 86292553 . G . PASS END=86292586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:25,0 chr2 86292587 . T . PASS END=86292588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:19,0 chr2 86297141 . C . PASS END=86297146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 86297147 . A . PASS END=86297148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 86297149 . C . PASS END=86297162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:18,0 chr2 86297163 . T . PASS END=86297163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 86297164 . C . PASS END=86297165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 86297166 . G . PASS END=86297194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:26,0 chr2 86297195 . G . PASS END=86297195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 86297196 . C . PASS END=86297198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 86297199 . A . PASS END=86297200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 86297201 . C . PASS END=86297201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 86297202 . T . PASS END=86297203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 86297204 . A . PASS END=86297204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 86297205 . C . PASS END=86297205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 86297206 . T . PASS END=86297206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 86297207 . C . PASS END=86297220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:31,0 chr2 86297221 . C . PASS END=86297221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 86297222 . A . PASS END=86297285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,970:0,82,255:40,0 chr2 86297286 . A . PASS END=86297286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1406:0,79,255:38,0 chr2 86297287 . C . PASS END=86297309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1443:0,104,255:40,0 chr2 86297310 . G . PASS END=86297310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:32,0 chr2 86297311 . C . PASS END=86297333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,102,255:35,0 chr2 86297334 . C . PASS END=86297345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:28:0,72,1080:0,84,255:26,0 chr2 86297346 . G . PASS END=86297347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 86297348 . C . PASS END=86297372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr2 86297373 . C . PASS END=86297373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 86297374 . C . PASS END=86297379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86297380 . T . PASS END=86297390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 86297391 . C . PASS END=86297395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:19:0,33,495:0,57,255:11,0 chr2 86302153 . A . PASS END=86302177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:18,0 chr2 86302178 . G . PASS END=86302178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr2 86302179 . C . PASS END=86302179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 86302180 . C . PASS END=86302180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 86302181 . C . PASS END=86302195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,629:0,54,255:19,0 chr2 86302196 . A . PASS END=86302196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:17,0 chr2 86302197 . G . PASS END=86302197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,665:0,41,255:16,0 chr2 86302198 . A . PASS END=86302198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,530:0,18,255:16,0 chr2 86302199 . A . PASS END=86302203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:17,0 chr2 86302204 . C . PASS END=86302204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr2 86302205 . T . PASS END=86302210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr2 86302211 . A . PASS END=86302212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:15,0 chr2 86302213 . G . PASS END=86302225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,637:0,54,255:18,0 chr2 86302226 . G . PASS END=86302227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 86302228 . C . PASS END=86302236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,692:0,54,255:19,0 chr2 86302237 . A . PASS END=86302237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,562:0,18,255:18,0 chr2 86302238 . G . PASS END=86302255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr2 86302256 . C . PASS END=86302257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 86302258 . G . PASS END=86302258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 86302259 . C . PASS END=86302263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 86302264 . C . PASS END=86302275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,670:0,49,255:19,0 chr2 86302276 . C . PASS END=86302276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 86302277 . A . PASS END=86302280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 86302281 . A . PASS END=86302283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 86302284 . C . PASS END=86302284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 86302285 . T . PASS END=86302288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 86302289 . G . PASS END=86302290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 86302291 . G . PASS END=86302297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 86302298 . T . PASS END=86302298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:21,0 chr2 86302299 . T . PASS END=86302307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 86302308 . T . PASS END=86302308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,721:0,27,255:20,0 chr2 86302309 . G . PASS END=86302311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 86302312 . G . PASS END=86302313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 86302314 . C . PASS END=86302315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 86302316 . G . PASS END=86302316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:19,0 chr2 86302317 . C . PASS END=86302319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr2 86302320 . G . PASS END=86302339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 86302340 . C . PASS END=86302340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr2 86302341 . A . PASS END=86302342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 86302343 . G . PASS END=86302343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 86302344 . G . PASS END=86302346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 86302347 . T . PASS END=86302347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr2 86302348 . A . PASS END=86302349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86302350 . C . PASS END=86302350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:17,0 chr2 86302351 . T . PASS END=86302361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:18,0 chr2 86302362 . A . PASS END=86302362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr2 86302363 . G . PASS END=86302372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,643:0,40,255:17,0 chr2 86302373 . G . PASS END=86302373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 86302374 . T . PASS END=86302378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 86302379 . A . PASS END=86302379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 86302380 . A . PASS END=86302383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,540:0,51,255:17,0 chr2 86304982 . C . PASS END=86305001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,105,1602:0,105,255:40,0 chr2 86305002 . T . PASS END=86305085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:49:0,106,1723:0,106,255:40,0 chr2 86305086 . C . PASS END=86305104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:44:0,97,1463:0,97,255:40,0 chr2 86305237 . C . PASS END=86305238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 86305239 . G . PASS END=86305407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:32:0,88,1219:0,88,255:40,0 chr2 86307939 . C . PASS END=86308099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:37:0,90,1350:0,90,255:40,0 chr2 86308100 . A . PASS END=86308100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1358:0,68,255:29,0 chr2 86308101 . C . PASS END=86308101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1350:0,123,255:30,0 chr2 86308724 . C . PASS END=86308829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:81:0,120,1800:0,216,255:40,0 chr2 86310205 . C . PASS END=86310291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,104,1354:0,104,255:40,0 chr2 86315689 . C . PASS END=86315703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr2 86315704 . C . PASS END=86315737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1186:0,83,255:38,0 chr2 86315738 . A . PASS END=86315738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr2 86315739 . A . PASS END=86315740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 86315741 . C T, 45.45 PASS DP=39;MQ=250.00;MQRankSum=5.182;ReadPosRankSum=2.266;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,15,0:0.385,0.000:39:9,8,0:15,7,0:45:80,0,50,536,842,1378:255,0,255:22,0:4.5450e+01,1.4548e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,11,4:15,9,8,7 chr2 86315742 . G . PASS END=86315778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1373:0,101,255:37,0 chr2 86315779 . C . PASS END=86315792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:35:0,81,1215:0,88,255:34,0 chr2 86315908 . T . PASS END=86315993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1170:0,83,255:40,0 chr2 86316945 . A . PASS END=86316999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,107,1434:0,107,255:40,0 chr2 86317000 . T . PASS END=86317036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:47:0,106,1729:0,106,255:40,0 chr2 86317037 . G C, 40.38 PASS DP=45;MQ=250.00;MQRankSum=5.405;ReadPosRankSum=3.311;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,15,0:0.333,0.000:45:12,8,0:18,7,0:40:75,0,50,534,1061,1595:255,0,255:28,0:4.0375e+01,4.2015e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,17,6,9:15,15,7,8 chr2 86317038 . A . PASS END=86317052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,110,1520:0,110,255:40,0 chr2 86325734 . C . PASS END=86325736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 86325737 . G . PASS END=86325744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1001:0,84,255:29,0 chr2 86325745 . T . PASS END=86325745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 86325746 . T . PASS END=86325746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 86325747 . C . PASS END=86325747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 86325748 . T . PASS END=86325877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:29:0,81,997:0,86,255:40,0 chr2 86325878 . C . PASS END=86325883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:28:0,72,1080:0,84,255:25,0 chr2 86327091 . A . PASS END=86327092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 86327093 . C . PASS END=86327093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 86327094 . G . PASS END=86327097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 86327098 . A . PASS END=86327098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr2 86327099 . G . PASS END=86327263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:30:0,84,1088:0,90,255:40,0 chr2 86327264 . G . PASS END=86327266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:36:0,66,990:0,108,255:26,0 chr2 86327267 . G . PASS END=86327267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,903:0,57,255:21,0 chr2 86327268 . G . PASS END=86327274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:23,0 chr2 86327275 . A . PASS END=86327295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr2 86332823 . T . PASS END=86332829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,840:0,75,255:25,0 chr2 86332830 . C . PASS END=86332846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1011:0,84,255:33,0 chr2 86332847 . C . PASS END=86332861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:34,0 chr2 86332862 . T . PASS END=86332862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1195:0,66,255:33,0 chr2 86332863 . G . PASS END=86332866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 86332867 . C . PASS END=86332867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr2 86332868 . C . PASS END=86332883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1148:0,83,255:32,0 chr2 86332884 . T . PASS END=86332884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1042:0,65,255:31,0 chr2 86332885 . C . PASS END=86332889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr2 86332890 . A . PASS END=86332890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:31,0 chr2 86332891 . G . PASS END=86332899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1126:0,80,255:32,0 chr2 86333371 . A . PASS END=86333374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 86333375 . C . PASS END=86333376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 86333377 . G . PASS END=86333393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 86333394 . C . PASS END=86333394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,0 chr2 86333395 . T . PASS END=86333413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,682:0,54,255:19,0 chr2 86333414 . G . PASS END=86333446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,760:0,63,255:22,0 chr2 86333447 . G . PASS END=86333447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 86333448 . T . PASS END=86333455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,65,255:20,0 chr2 86333456 . A . PASS END=86333474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,751:0,47,255:19,0 chr2 86334241 . T . PASS END=86334241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 86334242 . T . PASS END=86334242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr2 86334243 . C . PASS END=86334247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,811:0,66,255:24,0 chr2 86334248 . C . PASS END=86334248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr2 86334249 . A . PASS END=86334250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 86334251 . G . PASS END=86334251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:22,0 chr2 86334252 . A . PASS END=86334252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 86334253 . A . PASS END=86334253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,762:0,41,255:22,0 chr2 86334254 . A . PASS END=86334254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,677:0,39,255:22,0 chr2 86334255 . G . PASS END=86334255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr2 86334256 . A . PASS END=86334264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,840:0,72,255:24,0 chr2 86334265 . T . PASS END=86334266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 86334267 . C . PASS END=86334267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 86334268 . A . PASS END=86334271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 86334272 . G . PASS END=86334272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,988:0,56,255:28,0 chr2 86334273 . A . PASS END=86334287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1014:0,90,255:31,0 chr2 86334288 . T . PASS END=86334288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 86334289 . T . PASS END=86334316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1149:0,90,255:31,0 chr2 86334317 . T . PASS END=86334317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 86334318 . T . PASS END=86334323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 86335473 . A . PASS END=86335525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:67:0,120,1800:0,178,255:40,0 chr2 86335623 . G . PASS END=86335659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:89:0,120,1800:0,225,255:40,0 chr2 86338101 . T . PASS END=86338116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,155,255:40,0 chr2 86338236 . G . PASS END=86338281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:42:0,87,1452:0,87,255:40,0 chr2 86343653 . G . PASS END=86343721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,169,255:40,0 chr2 86344178 . C . PASS END=86344282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:70:0,120,1800:0,196,255:40,0 chr2 86346042 . A . PASS END=86346042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,782:0,17,255:22,0 chr2 86346044 . T . PASS END=86346050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,901:0,64,255:26,0 chr2 86346051 . T . PASS END=86346058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr2 86346059 . T . PASS END=86346059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 86346060 . A . PASS END=86346061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:31,0 chr2 86346062 . T . PASS END=86346062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:30,0 chr2 86346063 . T . PASS END=86346090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1089:0,89,255:39,0 chr2 86346091 . A . PASS END=86346091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr2 86346092 . G . PASS END=86346114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:36:0,86,1324:0,86,255:38,0 chr2 86346115 . G . PASS END=86346115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:33,0 chr2 86346116 . C . PASS END=86346140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1264:0,94,255:36,0 chr2 86346141 . A . PASS END=86346151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,80,255:26,0 chr2 86346152 . C . PASS END=86346156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 86346157 . T . PASS END=86346157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr2 86346158 . T . PASS END=86346161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 86346162 . A . PASS END=86346167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 86348602 . G . PASS END=86348606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 86348607 . A . PASS END=86348717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:53:0,114,1710:0,115,255:40,0 chr2 86350824 . G . PASS END=86350885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:73:0,120,1800:0,208,255:40,0 chr2 86352118 . A . PASS END=86352205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:78:0,120,1800:0,205,255:40,0 chr2 86352578 . C . PASS END=86352638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,125,255:40,0 chr2 86352918 . C . PASS END=86353003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:58:0,120,1800:0,135,255:40,0 chr2 86354284 . G . PASS END=86354428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,105,1482:0,107,255:40,0 chr2 86355064 . A . PASS END=86355114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,149,255:40,0 chr2 86357771 . G . PASS END=86357860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:77:0,120,1800:0,213,255:40,0 chr2 86358201 . A . PASS END=86358229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:94:0,120,1800:0,255,255:40,0 chr2 86359441 . T . PASS END=86359442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,120,1800:0,125,255:40,0 chr2 86359443 . C . PASS END=86359547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:47:0,120,1800:0,134,255:40,0 chr2 86360301 . T . PASS END=86360379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,107,1800:0,107,255:40,0 chr2 86360469 . G . PASS END=86360550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:36:0,92,1324:0,92,255:40,0 chr2 86360551 . T . PASS END=86360551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1183:0,77,255:34,0 chr2 86360552 . T . PASS END=86360559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1280:0,92,255:35,0 chr2 86361415 . A . PASS END=86361431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,922:0,84,255:30,0 chr2 86361432 . C . PASS END=86361432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 86361433 . A . PASS END=86361500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1125:0,83,255:38,0 chr2 86361962 . C . PASS END=86362110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:38:0,90,1263:0,95,255:40,0 chr2 86363644 . G . PASS END=86363685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,210,255:40,0 chr2 86364105 . A . PASS END=86364118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr2 86364119 . A . PASS END=86364119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 86364120 . T . PASS END=86364163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1102:0,87,255:39,0 chr2 86364164 . C . PASS END=86364164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:35,0 chr2 86364165 . C . PASS END=86364177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:38:0,82,1396:0,82,255:35,0 chr2 86364178 . G . PASS END=86364178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:31,0 chr2 86364179 . A . PASS END=86364188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:31,0 chr2 86364189 . T . PASS END=86364189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:29,0 chr2 86364190 . G . PASS END=86364206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 86364207 . T . PASS END=86364207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr2 86364208 . T . PASS END=86364211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 86364212 . A . PASS END=86364212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 86364213 . G . PASS END=86364218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 86364219 . C . PASS END=86364239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,914:0,62,255:26,0 chr2 86364240 . T . PASS END=86364240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,861:0,31,255:23,0 chr2 86364241 . T . PASS END=86364253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,885:0,75,255:25,0 chr2 86364254 . A . PASS END=86364256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,831:0,42,255:22,0 chr2 86364257 . A . PASS END=86364257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 86364258 . A . PASS END=86364258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,817:0,44,255:22,0 chr2 86364259 . C . PASS END=86364263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 86364592 . G . PASS END=86364661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,147,255:40,0 chr2 86364662 . G . PASS END=86364682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,108,1620:0,143,255:40,0 chr2 86371391 . T . PASS END=86371396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr2 86371397 . T . PASS END=86371398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 86371399 . G . PASS END=86371399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 86371400 . C . PASS END=86371401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 86371402 . G . PASS END=86371402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr2 86371403 . C . PASS END=86371404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 86371405 . C . PASS END=86371405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr2 86371406 . C . PASS END=86371566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:92:32:0,92,1142:0,92,255:40,0 chr2 86371567 . C . PASS END=86371603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:41:0,94,1512:0,94,255:40,0 chr2 86371604 . A G, 47.52 PASS DP=41;MQ=241.83;MQRankSum=2.077;ReadPosRankSum=3.506;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,17,0:0.415,0.000:41:13,6,0:11,11,0:46:82,0,50,600,858,1459:255,0,255:23,0:4.7518e+01,9.8627e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,14,7,10:11,13,12,5 chr2 86371605 . A . PASS END=86371641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,114,1558:0,115,255:40,0 chr2 86371642 . G . PASS END=86371755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,105,1575:0,107,255:40,0 chr2 86371756 . C . PASS END=86371757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:75:40:0,75,1125:0,104,255:26,0 chr2 86371758 . G . PASS END=86371789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr2 86371790 . G . PASS END=86371790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:27,0 chr2 86371791 . T . PASS END=86371792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 86371793 . C . PASS END=86371794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 86371795 . C . PASS END=86371805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1177:0,80,255:28,0 chr2 86371806 . A . PASS END=86371819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,74,255:26,0 chr2 86371820 . G . PASS END=86371820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,869:0,26,255:23,0 chr2 86371821 . A . PASS END=86371851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,848:0,62,255:25,0 chr2 86371852 . T . PASS END=86371852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 86371853 . A . PASS END=86371877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,922:0,72,255:24,0 chr2 86371878 . T . PASS END=86371878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 86371879 . C . PASS END=86371891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr2 86371892 . C . PASS END=86371896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 86371897 . G . PASS END=86371908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,74,255:24,0 chr2 86371909 . T . PASS END=86371909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 86371910 . T . PASS END=86371918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 86371919 . T . PASS END=86371926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr2 86371927 . T . PASS END=86371938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 86371939 . T . PASS END=86371994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1155:0,83,255:34,0 chr2 86371995 . A . PASS END=86372004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 86373191 . T . PASS END=86373193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr2 86373194 . G . PASS END=86373201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,910:0,81,255:27,0 chr2 86373202 . T . PASS END=86373202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 86373203 . G . PASS END=86373320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:32:0,91,1180:0,91,255:40,0 chr2 86374825 . C . PASS END=86374833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,945:0,75,255:26,0 chr2 86374834 . T . PASS END=86374841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr2 86374842 . T . PASS END=86374844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1043:0,51,255:30,1 chr2 86374845 . A . PASS END=86374851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1062:0,90,255:31,0 chr2 86374852 . T . PASS END=86374852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 86374853 . T . PASS END=86374874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1125:0,90,255:36,0 chr2 86374875 . G . PASS END=86374875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr2 86374876 . C . PASS END=86374939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,95,255:39,0 chr2 86374940 . T . PASS END=86374940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1063:0,77,255:27,0 chr2 86374941 . C . PASS END=86374951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:32,0 chr2 86374952 . T . PASS END=86374952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1119:0,69,255:30,0 chr2 86374953 . C . PASS END=86374956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 86378420 . C . PASS END=86378425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr2 86378426 . G . PASS END=86378438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1094:0,80,255:33,0 chr2 86378439 . T . PASS END=86378439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr2 86378440 . G . PASS END=86378648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,111,1374:0,111,255:40,0 chr2 86380683 . C . PASS END=86380697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:109:0,120,1800:0,255,255:40,0 chr2 86385715 . T . PASS END=86385721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,907:0,75,255:26,0 chr2 86385722 . T . PASS END=86385722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr2 86385723 . T . PASS END=86385723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 86385724 . T . PASS END=86385725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 86385726 . C . PASS END=86385730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:28,0 chr2 86385731 . A . PASS END=86385731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:29,0 chr2 86385732 . G . PASS END=86385753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1074:0,90,255:40,0 chr2 86385754 . T . PASS END=86385754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1427:0,71,255:39,0 chr2 86385755 . G . PASS END=86385830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,92,255:40,0 chr2 86385831 . T . PASS END=86385831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 86385832 . G . PASS END=86385833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1045:0,84,255:28,0 chr2 86385834 . G . PASS END=86385844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 86386659 . C . PASS END=86386794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:36:0,108,1289:0,108,255:40,0 chr2 86389075 . T . PASS END=86389088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1529:0,113,255:40,0 chr2 86389099 . T . PASS END=86389155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:37:0,93,1360:0,100,255:40,0 chr2 86389156 . G . PASS END=86389161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:36:0,66,990:0,95,255:24,0 chr2 86389162 . T . PASS END=86389172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:24:0,42,630:0,72,255:15,0 chr2 86389173 . C . PASS END=86389175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:39:24:0,39,585:0,72,255:13,0 chr2 86389176 . C . PASS END=86389179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 86389180 . G . PASS END=86389183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 86389184 . A . PASS END=86389185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 86389186 . T . PASS END=86389186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 86389187 . T . PASS END=86389187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,478:0,29,255:12,0 chr2 86389188 . C . PASS END=86389202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr2 86393631 . C . PASS END=86393631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 86393632 . T . PASS END=86393632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:25,0 chr2 86393633 . C . PASS END=86393651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1027:0,84,255:30,0 chr2 86393652 . T . PASS END=86393652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 86393653 . T . PASS END=86393723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1103:0,84,255:39,0 chr2 86393724 . A . PASS END=86393724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:30,0 chr2 86393725 . C . PASS END=86393725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 86393726 . T . PASS END=86393741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1012:0,82,255:30,0 chr2 86393742 . A . PASS END=86393743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:26,0 chr2 86393744 . C . PASS END=86393744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 86393745 . A . PASS END=86393756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:54:26:0,54,810:0,78,255:19,0 chr2 86393757 . C . PASS END=86393757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:17,0 chr2 86393758 . T . PASS END=86393764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:22:0,42,630:0,53,255:14,0 chr2 86393765 . G . PASS END=86393765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr2 86393766 . A . PASS END=86393766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:7:23:0,7,589:0,7,255:11,0 chr2 86393767 . G . PASS END=86393767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:39:23:0,39,585:0,53,255:12,0 chr2 86397872 . A . PASS END=86397967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,111,1665:0,116,255:40,2 chr2 86398331 . C . PASS END=86398468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,110,1512:0,110,255:40,0 chr2 86398482 . T . PASS END=86398504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,203,255:40,0 chr2 86400773 . C . PASS END=86400786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:35:0,84,1341:0,84,255:40,0 chr2 86400787 . G . PASS END=86400823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,119,1468:0,119,255:40,0 chr2 86400824 . G A, 50.00 PASS DP=47;MQ=241.97;MQRankSum=3.306;ReadPosRankSum=3.156;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,26,0:0.553,0.000:47:14,9,0:7,17,0:48:85,0,49,929,735,1665:255,0,255:20,0:5.0000e+01,7.0669e-05,5.2018e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,12,14:11,10,15,11 chr2 86400825 . C . PASS END=86400861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:43:0,96,1508:0,96,255:40,0 chr2 86400862 . A . PASS END=86400885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:32:0,90,1350:0,96,255:40,0 chr2 86406556 . C . PASS END=86406576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,607:0,48,255:19,0 chr2 86406577 . A . PASS END=86406586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:24,0 chr2 86406587 . G . PASS END=86406587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,856:0,39,255:22,0 chr2 86406588 . C . PASS END=86406601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:25,0 chr2 86406602 . A . PASS END=86406604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 86406605 . T . PASS END=86406605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 86406606 . C . PASS END=86406610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 86406611 . A . PASS END=86406611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,960:0,70,255:28,0 chr2 86406612 . G . PASS END=86406623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1001:0,87,255:29,0 chr2 86406624 . A . PASS END=86406624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:27,0 chr2 86406625 . A . PASS END=86406745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1305:0,92,255:39,0 chr2 86408422 . C . PASS END=86408495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,105,1519:0,110,255:40,0 chr2 86422461 . C . PASS END=86422462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 86422463 . G . PASS END=86422463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 86422464 . G . PASS END=86422488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:24,0 chr2 86422489 . T . PASS END=86422489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 86422490 . G . PASS END=86422503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,939:0,64,255:25,0 chr2 86422504 . A . PASS END=86422504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 86422505 . T . PASS END=86422505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 86426614 . A . PASS END=86426656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1166:0,86,255:34,0 chr2 86433229 . G . PASS END=86433231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 86433232 . T . PASS END=86433235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 86433236 . A . PASS END=86433237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1033:0,73,255:29,2 chr2 86433238 . G . PASS END=86433238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,994:0,24,255:29,2 chr2 86433239 . G . PASS END=86433239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 86433240 . C . PASS END=86433257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:32,0 chr2 86433258 . T . PASS END=86433258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1270:0,78,255:33,0 chr2 86433259 . C . PASS END=86433397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,102,1527:0,102,255:40,0 chr2 86433398 . T . PASS END=86433398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1518:0,68,255:31,0 chr2 86433399 . A . PASS END=86433418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:34:0,82,1176:0,82,255:34,0 chr2 86434306 . A . PASS END=86434450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:36:0,83,1305:0,83,255:40,0 chr2 86437603 . G . PASS END=86437791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:42:0,105,1575:0,110,255:40,0 chr2 86439549 . A . PASS END=86439549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 86440751 . G . PASS END=86440755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 86440756 . C . PASS END=86440772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,120,255:40,0 chr2 86441195 . G . PASS END=86441195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 86441266 . G . PASS END=86441266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 86441312 . A . PASS END=86441312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 86441429 . T . PASS END=86441429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 86441604 . T . PASS END=86441604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 86441728 . C . PASS END=86441728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 86441782 . G . PASS END=86441782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1225:0,86,255:33,0 chr2 86441805 . T . PASS END=86441805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:32,0 chr2 86441852 . G . PASS END=86441852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 86441962 . G . PASS END=86441962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 86441973 . G . PASS END=86441973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1205:0,99,255:33,0 chr2 86442111 . G . PASS END=86442111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,909:0,35,255:11,1 chr2 86442139 . G . PASS END=86442139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,858:0,32,255:11,0 chr2 86442145 . G . PASS END=86442145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:27:33:0,27,405:0,65,255:7,1 chr2 86442169 . T . LowGQ END=86442169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,676:20,0,255:19,2 chr2 86442309 . T . PASS END=86442309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 86442343 . C . PASS END=86442343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 86442429 . A . PASS END=86442429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 86442460 . G . PASS END=86442460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 86442594 . A . PASS END=86442594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1604:0,94,255:40,0 chr2 86442629 . C . PASS END=86442629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 86442636 . T . PASS END=86442636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr2 86442643 . A . PASS END=86442643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr2 86442727 . C . PASS END=86442727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 86442999 . T . PASS END=86442999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86443043 . C . PASS END=86443043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 86443136 . T . PASS END=86443136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 86443298 . A . PASS END=86443298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 86443375 . C . PASS END=86443375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 86443504 . G . PASS END=86443504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 86443769 . C . PASS END=86443769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 86443944 . G . LowGQ END=86443944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,5:33:0:33:0,0,756:13,0,255:25,0 chr2 86444038 . G . PASS END=86444038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 86444069 . C . PASS END=86444069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 86444158 . T . PASS END=86444158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 86444162 . T . PASS END=86444211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:41:0,93,1490:0,93,255:40,0 chr2 86444212 . A . PASS END=86444212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1322:0,70,255:38,0 chr2 86444213 . T . PASS END=86444233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1350:0,87,255:40,0 chr2 86447093 . C . PASS END=86447235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:87:40:0,87,1305:0,106,255:40,0 chr2 86447236 . C . PASS END=86447244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:33:0,87,1305:0,97,255:32,0 chr2 86454486 . C . PASS END=86454521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1166:0,90,255:34,0 chr2 86459747 . C . PASS END=86459782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:18,0 chr2 86459783 . A . PASS END=86459799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr2 86459800 . T . PASS END=86459800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:21,0 chr2 86459801 . T . PASS END=86459812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 86459813 . C . PASS END=86459813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 86459814 . G . PASS END=86459818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 86459819 . G . PASS END=86459820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 86459821 . C . PASS END=86459844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:26,0 chr2 86459845 . A . PASS END=86459845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:25,0 chr2 86459846 . G . PASS END=86459855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 86459856 . C . PASS END=86459865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 86459866 . G . PASS END=86459866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 86459867 . A . PASS END=86459867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 86459868 . T . PASS END=86459869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 86459870 . G . PASS END=86459870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 86459871 . T . PASS END=86459909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 86459910 . A . PASS END=86459910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 86459911 . T . PASS END=86459911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 86459912 . A . PASS END=86459918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 86459919 . C . PASS END=86459919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86459920 . C . PASS END=86459925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:18,0 chr2 86459928 . G . PASS END=86459928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:12,0 chr2 86467045 . C . PASS END=86467063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:13,0 chr2 86467064 . C . PASS END=86467074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 86467075 . A . PASS END=86467075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr2 86467076 . G . PASS END=86467117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr2 86467118 . T . PASS END=86467118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,488:0,9,255:13,0 chr2 86467119 . T . PASS END=86467120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 86467121 . G . PASS END=86467121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 86467122 . T . PASS END=86467130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,558:0,45,255:15,0 chr2 86467131 . T . PASS END=86467131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 86467132 . C . PASS END=86467138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 86467139 . G . PASS END=86467139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 86467140 . T . PASS END=86467150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,33,255:11,0 chr2 86467151 . T . PASS END=86467151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 86467152 . C . PASS END=86467154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 86467155 . T . PASS END=86467182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,304:0,27,255:9,0 chr2 86467183 . G . PASS END=86467183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 86467184 . A . PASS END=86467185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 86467186 . T . PASS END=86467186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 86467187 . C . PASS END=86467193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 86467194 . C . PASS END=86467194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 86478990 . T . PASS END=86478991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86478992 . A . PASS END=86478992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 86478993 . G . PASS END=86479012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:65:22:0,65,800:0,65,255:26,0 chr2 86479013 . C . PASS END=86479034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:30,0 chr2 86479035 . A G, 48.08 PASS DP=31;MQ=250.00;MQRankSum=4.664;ReadPosRankSum=1.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,13,0:0.419,0.000:31:8,10,0:10,3,0:47:83,0,50,436,635,1071:255,0,255:16,0:4.8076e+01,8.9308e-05,5.3000e+01,4.3623e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,9,6,7:11,7,7,6 chr2 86479036 . G . PASS END=86479072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1151:0,86,255:34,0 chr2 86479073 . A . PASS END=86479090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,99,1390:0,102,255:39,0 chr2 86479091 . C . PASS END=86479091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr2 86479092 . C . PASS END=86479179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,82,255:40,0 chr2 86479180 . C . PASS END=86479193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,976:0,65,255:25,0 chr2 86479195 . T . PASS END=86479195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 86481810 . A . PASS END=86481810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 86481817 . C . PASS END=86481818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 86481819 . T . PASS END=86481819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 86481820 . T . PASS END=86481820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 86481821 . T . PASS END=86481821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 86481822 . C . PASS END=86481822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 86481823 . T . PASS END=86481823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 86481824 . T . PASS END=86481832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,873:0,78,255:26,0 chr2 86481833 . A . PASS END=86481834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1056:0,87,255:32,0 chr2 86481835 . C T, 49.13 PASS DP=32;MQ=249.97;MQRankSum=4.767;ReadPosRankSum=2.602;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:9,9,0:9,5,0:47:84,0,47,184,184,184:255,0,255:18,0:4.9125e+01,9.6556e-05,5.0000e+01,1.8390e+02,2.1867e+02,1.8691e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,9,9,5:6,12,10,4 chr2 86481836 . G . PASS END=86481872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1125:0,80,255:40,0 chr2 86481873 . C . PASS END=86481916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:38:0,87,1335:0,87,255:40,0 chr2 86481917 . A . PASS END=86481917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:31,0 chr2 86481918 . G . PASS END=86481937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:32,0 chr2 86481939 . T . PASS END=86481939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 86491088 . C . PASS END=86491164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,111,1663:0,111,255:40,0 chr2 86491166 . T . PASS END=86491166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 86509292 . C . PASS END=86509304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,135,255:40,0 chr2 86509305 . G . PASS END=86509350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,144,255:40,0 chr2 86509351 . G . PASS END=86509365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,130,255:40,0 chr2 86509367 . T . PASS END=86509367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 86512698 . C . PASS END=86512711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:38:0,83,1335:0,83,255:33,0 chr2 86524867 . C . PASS END=86524874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1180:0,93,255:32,0 chr2 86563845 . C . PASS END=86563866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:34,0 chr2 86563867 . T . PASS END=86563867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1166:0,75,255:29,0 chr2 86563868 . G . PASS END=86563869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:31,0 chr2 86563870 . A . PASS END=86563871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1170:0,69,255:27,0 chr2 86563872 . G . PASS END=86563876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 86563877 . G . PASS END=86563881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 86563882 . G . PASS END=86563882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 86563883 . T . PASS END=86563897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1017:0,73,255:26,0 chr2 86564597 . C . PASS END=86564597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 86564602 . A . PASS END=86564617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 86564618 . T . PASS END=86564632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:16,0 chr2 86564633 . T . PASS END=86564633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 86564637 . G . PASS END=86564637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 86564658 . C . PASS END=86564658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 86565147 . C . PASS END=86565199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:38:0,91,1435:0,91,255:40,0 chr2 86669171 . A . PASS END=86669172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 86669173 . G . LowGQ END=86669173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:9,0 chr2 86669174 . G . PASS END=86669186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:12,0 chr2 86669187 . G . PASS END=86669187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 86669188 . A . PASS END=86669200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr2 86669201 . G . PASS END=86669210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 86669211 . G . PASS END=86669211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 86669212 . G . PASS END=86669213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 86669214 . G . PASS END=86669214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 86669215 . G . PASS END=86669225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 86669226 . G . PASS END=86669226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 86669227 . T . PASS END=86669228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 86669229 . T . PASS END=86669230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr2 86669231 . T . PASS END=86669233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 86669234 . G . PASS END=86669234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 86669235 . C . PASS END=86669245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr2 86669246 . A . PASS END=86669246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 86669247 . G . PASS END=86669254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 86669255 . A . PASS END=86669255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 86669256 . G . PASS END=86669287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,459:0,39,255:13,0 chr2 86669288 . G . PASS END=86669288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 86669289 . A . PASS END=86669293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 86669294 . C . PASS END=86669298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 86669299 . G . PASS END=86669309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:15:0,35,540:0,35,255:13,0 chr2 86669310 . C . PASS END=86669310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr2 86669311 . C . PASS END=86669334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 86669335 . C . PASS END=86669345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 86669346 . A . PASS END=86669346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr2 86669347 . G . PASS END=86669356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 86676930 . G . PASS END=86677085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:48:0,108,1620:0,140,255:40,0 chr2 86678226 . A . PASS END=86678336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:40:0,84,1260:0,92,255:40,0 chr2 86682208 . G . PASS END=86682310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,170,255:40,1 chr2 86683565 . G . PASS END=86683591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:91:36:0,91,1189:0,91,255:40,0 chr2 86683592 . T . PASS END=86683689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:50:0,101,1800:0,101,255:40,0 chr2 86683928 . A . PASS END=86684000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:89:0,120,1800:0,251,255:40,0 chr2 86684106 . G . PASS END=86684194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,154,255:40,0 chr2 86691176 . G . PASS END=86691179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,909:0,75,255:26,0 chr2 86691180 . C . PASS END=86691335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:28:0,84,1055:0,84,255:40,0 chr2 86691336 . A . PASS END=86691339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:60:37:0,60,900:0,103,255:22,0 chr2 86693495 . A . PASS END=86693898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:80:32:0,80,1147:0,80,255:40,0 chr2 86693899 . A . PASS END=86693899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1234:0,75,255:32,0 chr2 86693900 . G . PASS END=86694006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:36:0,86,1376:0,86,255:40,0 chr2 86697327 . C . PASS END=86697378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,768:0,63,255:26,0 chr2 86697379 . A . PASS END=86697379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr2 86697380 . C . PASS END=86697385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 86697386 . G . PASS END=86697386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 86697387 . G . PASS END=86697399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr2 86697400 . A . PASS END=86697402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:25,0 chr2 86697403 . G . PASS END=86697404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 86697405 . A . PASS END=86697406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 86697407 . G . PASS END=86697407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 86697408 . A . PASS END=86697412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,87,255:26,0 chr2 86697413 . T . PASS END=86697418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 86697419 . A . PASS END=86697422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 86697423 . T . PASS END=86697449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr2 86697450 . A . PASS END=86697450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:26,0 chr2 86697451 . G . PASS END=86697452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 86697453 . G . PASS END=86697454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 86697455 . C . PASS END=86697458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 86697459 . T . PASS END=86697477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:26,0 chr2 86697478 . T . PASS END=86697479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,835:0,42,255:22,0 chr2 86697480 . A . PASS END=86697486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,847:0,69,255:23,0 chr2 86697487 . A . PASS END=86697487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 86697488 . C . PASS END=86697489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr2 86697490 . G . PASS END=86697490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 86697491 . A . PASS END=86697492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 86697493 . G . PASS END=86697493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 86697494 . G . PASS END=86697495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 86697496 . C . PASS END=86697527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,570:0,40,255:19,0 chr2 86697528 . G . PASS END=86697528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:14,0 chr2 86697529 . G . PASS END=86697531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 86701899 . G . PASS END=86701899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:78:52:0,78,1693:0,78,255:40,0 chr2 86701900 . T . PASS END=86701902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,109,1770:0,109,255:40,0 chr2 86701903 . C . PASS END=86701903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:76:52:0,76,1690:0,76,255:40,0 chr2 86701904 . A . PASS END=86701906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,112,1800:0,112,255:40,0 chr2 86701907 . T . PASS END=86701907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:29:53:0,29,1563:0,29,255:40,0 chr2 86701908 . C . PASS END=86702096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:83:30:0,83,1127:0,83,255:40,0 chr2 86702097 . A . PASS END=86702110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr2 86702111 . A . PASS END=86702113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,75,255:19,0 chr2 86705000 . G . PASS END=86705000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 86705001 . A . PASS END=86705001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 86705002 . C . PASS END=86705196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:27:0,81,1024:0,81,255:40,0 chr2 86705293 . G . PASS END=86705388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,146,255:40,0 chr2 86705731 . C . PASS END=86705858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,102,1530:0,129,255:40,0 chr2 86707290 . A . PASS END=86707291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:14:0,31,512:0,31,255:14,0 chr2 86707292 . T . PASS END=86707292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 86707293 . T . PASS END=86707294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,431:0,31,255:14,0 chr2 86707295 . T . PASS END=86707303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,470:0,45,255:16,0 chr2 86707304 . A . PASS END=86707304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr2 86707305 . G . PASS END=86707309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr2 86707310 . A . PASS END=86707310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:15,0 chr2 86707311 . C . PASS END=86707315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:18,0 chr2 86707316 . T . PASS END=86707316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 86707317 . C . PASS END=86707317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr2 86707318 . T . PASS END=86707338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:19,0 chr2 86707339 . A . PASS END=86707397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:24,0 chr2 86707398 . A . PASS END=86707415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr2 86707416 . C . PASS END=86707417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 86707418 . A . PASS END=86707419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 86707420 . C . PASS END=86707426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 86707427 . A . PASS END=86707427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:21,0 chr2 86707428 . T . PASS END=86707432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 86707433 . T . PASS END=86707433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:21,0 chr2 86707434 . C . PASS END=86707438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 86707439 . C . PASS END=86707440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,767:0,50,255:21,0 chr2 86707441 . G . PASS END=86707445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 86707446 . G . PASS END=86707464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:16:0,48,576:0,48,255:17,0 chr2 86707465 . A . PASS END=86707465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 86707466 . T . PASS END=86707470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr2 86707471 . A . PASS END=86707471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 86707472 . C . PASS END=86707481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 86707482 . A . PASS END=86707482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 86707483 . A . PASS END=86707483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:11,0 chr2 86707484 . G . PASS END=86707485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 86709053 . A . PASS END=86709225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:33:0,82,1117:0,82,255:40,0 chr2 86709230 . G . PASS END=86709230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 86709581 . A . PASS END=86709757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:36:0,99,1413:0,104,255:40,0 chr2 86709758 . C . PASS END=86709758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr2 86709759 . A . PASS END=86709772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1181:0,88,255:35,0 chr2 86709773 . A . PASS END=86709781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,87,255:26,0 chr2 86709782 . T . PASS END=86709786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 86709787 . T . PASS END=86709796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:21,0 chr2 86709797 . G . PASS END=86709817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,706:0,57,255:19,0 chr2 86711110 . C . PASS END=86711281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:33:0,87,1305:0,94,255:40,0 chr2 86712065 . A . PASS END=86712152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:64:0,120,1800:0,137,255:40,0 chr2 86712852 . G . PASS END=86712873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:24,0 chr2 86712874 . A . PASS END=86712874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr2 86712875 . T . PASS END=86712875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 86712876 . T . PASS END=86712876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 86712877 . C . PASS END=86712928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr2 86712929 . T . PASS END=86712944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 86712945 . T . PASS END=86712952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 86712953 . A . PASS END=86712953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:19,0 chr2 86712954 . T . PASS END=86712961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 86712962 . C . PASS END=86712980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:15:0,41,630:0,41,255:19,0 chr2 86712981 . T . PASS END=86712982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 86716441 . G . PASS END=86716560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,120,1800:0,121,255:40,0 chr2 86716643 . A . PASS END=86716782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,106,1367:0,106,255:40,0 chr2 86718004 . G . PASS END=86718398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:51:0,120,1800:0,134,255:40,0 chr2 86719162 . G . PASS END=86719264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:38:0,101,1390:0,101,255:40,0 chr2 86732927 . C . PASS END=86732945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:19,0 chr2 86732946 . A . PASS END=86732956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 86732957 . C . PASS END=86732957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 86732958 . A . PASS END=86732986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,831:0,63,255:26,0 chr2 86732987 . C . PASS END=86732999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 86733000 . G . PASS END=86733000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr2 86733001 . C . PASS END=86733009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 86733010 . C . PASS END=86733047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,68,255:26,0 chr2 86733048 . T . PASS END=86733048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 86733049 . T . PASS END=86733054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 86733055 . G . PASS END=86733072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr2 86734602 . C . PASS END=86734716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:52:0,120,1800:0,135,255:40,1 chr2 86737481 . C . PASS END=86737482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:25,0 chr2 86737483 . T . PASS END=86737484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:25:0,47,837:0,47,255:25,0 chr2 86737485 . A . PASS END=86737492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:27,0 chr2 86737493 . T . PASS END=86737495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,912:0,84,255:28,0 chr2 86737496 . G . PASS END=86737496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 86737497 . G . PASS END=86737497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 86737498 . A . PASS END=86737499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:29,0 chr2 86737500 . A . PASS END=86737500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,856:0,40,255:27,0 chr2 86737501 . A . PASS END=86737501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,976:0,93,255:31,0 chr2 86737502 . C . PASS END=86737504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,964:0,63,255:34,0 chr2 86737505 . C . PASS END=86737509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:36:0,94,1246:0,94,255:36,0 chr2 86737510 . T . PASS END=86737510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1241:0,64,255:35,0 chr2 86737511 . G . PASS END=86737521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:37:0,80,1280:0,80,255:36,0 chr2 86737522 . T . PASS END=86737522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1243:0,75,255:36,0 chr2 86737523 . C . PASS END=86737530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1372:0,98,255:38,0 chr2 86737531 . T . PASS END=86737531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1211:0,53,255:36,0 chr2 86737532 . C . PASS END=86737602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:32:0,84,1250:0,84,255:40,0 chr2 86756341 . C . PASS END=86756369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,864:0,62,255:26,0 chr2 86756370 . G . PASS END=86756411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,972:0,80,255:36,0 chr2 86756412 . T . PASS END=86756412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr2 86756413 . T . PASS END=86756495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1170:0,83,255:40,0 chr2 86756496 . A . PASS END=86756496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:32,0 chr2 86756497 . C . PASS END=86756512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1202:0,83,255:33,0 chr2 86756513 . T . PASS END=86756513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr2 86756514 . T . PASS END=86756520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 86769375 . C . PASS END=86769435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:74:0,120,1800:0,189,255:40,0 chr2 86790427 . C . PASS END=86790443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 86790444 . T . PASS END=86790471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr2 86830966 . T . PASS END=86830978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,562:0,51,255:18,0 chr2 86830979 . T . PASS END=86830995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:26,0 chr2 86830996 . G . PASS END=86831008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 86831009 . G . PASS END=86831009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 86831010 . G . PASS END=86831010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr2 86831011 . C . PASS END=86831020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,963:0,78,255:26,0 chr2 86831021 . T . PASS END=86831477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:28:0,84,1033:0,84,255:40,0 chr2 86831478 . G . PASS END=86831478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:36,0 chr2 86831479 . C . PASS END=86832541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:38:0,80,1305:0,80,255:40,0 chr2 86839282 . C . PASS END=86839351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,113,1582:0,113,255:40,0 chr2 86839352 . C . PASS END=86839388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,113,1755:0,113,255:40,0 chr2 86839389 . T C, 49.60 PASS DP=47;MQ=250.00;MQRankSum=5.852;ReadPosRankSum=2.036;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,22,0:0.468,0.000:47:13,14,0:12,8,0:48:84,0,50,749,886,1635:255,0,255:22,0:4.9602e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,7,15:14,11,11,11 chr2 86839390 . G . PASS END=86839397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,114,1710:0,122,255:39,0 chr2 86845134 . T . PASS END=86845136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 86847453 . C . PASS END=86847476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1203:0,86,255:33,0 chr2 86847477 . T . PASS END=86847477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:30,0 chr2 86847478 . G . PASS END=86847572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1227:0,97,255:40,0 chr2 86847573 . C . PASS END=86847574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:32:0,78,1170:0,96,255:26,0 chr2 86847575 . C . PASS END=86847580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:27,0 chr2 86847581 . C . PASS END=86847591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 86847592 . C . PASS END=86847592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr2 86849784 . C . PASS END=86849820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,638:0,40,255:19,0 chr2 86849821 . G . PASS END=86849826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:23,0 chr2 86849827 . C . PASS END=86849827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 86849828 . C . PASS END=86849828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 86849829 . C . PASS END=86849829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 86849830 . T . PASS END=86849833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr2 86849834 . T . PASS END=86849835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,723:0,52,255:22,0 chr2 86849836 . G . PASS END=86849851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,933:0,62,255:26,0 chr2 86849852 . T . PASS END=86849852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr2 86849853 . C . PASS END=86849865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,65,255:25,0 chr2 86849866 . C . PASS END=86849870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:24:0,54,810:0,56,255:18,0 chr2 86849871 . T . PASS END=86849878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:22,0 chr2 86849879 . C . PASS END=86849879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 86849880 . T . PASS END=86849880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 86849881 . C . PASS END=86849882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 86849883 . G . PASS END=86849885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 86849886 . C . PASS END=86849886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr2 86849887 . C . PASS END=86849890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 86849891 . G . PASS END=86849891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 86849892 . G . PASS END=86849893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 86849894 . T . PASS END=86849894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 86849895 . C . PASS END=86849896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 86849897 . A . PASS END=86849897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr2 86849898 . C . PASS END=86849900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 86849901 . G . PASS END=86849901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 86849902 . C . PASS END=86849905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 86849906 . G . PASS END=86849907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:20,0 chr2 86849908 . G . PASS END=86849908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 86849909 . G . PASS END=86849909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 86849910 . C . PASS END=86849918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:23,0 chr2 86849919 . C . PASS END=86849919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 86849920 . A . PASS END=86849927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:25,0 chr2 86849928 . A . PASS END=86849928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:24,0 chr2 86849929 . C . PASS END=86849929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 86849930 . C . PASS END=86849930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 86849931 . A . PASS END=86849931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 86849932 . C . PASS END=86849936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 86849937 . T . PASS END=86849937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 86849938 . G . PASS END=86849938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 86849939 . G . PASS END=86849940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1017:0,71,255:27,0 chr2 86849941 . C . PASS END=86849944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 86849945 . A . PASS END=86849945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 86849946 . A . PASS END=86849947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 86849948 . A . PASS END=86849948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr2 86849949 . A . PASS END=86849950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1141:0,93,255:31,0 chr2 86849951 . C . PASS END=86849951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:28,0 chr2 86849952 . T . PASS END=86849964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 86849965 . C . PASS END=86849975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:26,0 chr2 86849976 . A . PASS END=86849976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:20,0 chr2 86849977 . A . PASS END=86849987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:25:0,67,931:0,67,255:24,0 chr2 86849988 . A . PASS END=86849988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 86849989 . G . PASS END=86849999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 86850000 . T . PASS END=86850000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr2 86850001 . C . PASS END=86850002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 86850003 . G . PASS END=86850003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 86850004 . C . PASS END=86850008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,876:0,69,255:23,0 chr2 86850009 . T . PASS END=86850009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,752:0,52,255:20,0 chr2 86850939 . C . PASS END=86850945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,490:0,42,255:18,0 chr2 86850946 . A . PASS END=86850946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr2 86850947 . A . PASS END=86850985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,534:0,40,255:19,0 chr2 86947791 . A . LowGQ END=86947792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:0,0,146:5,0 chr2 86947793 . G . PASS END=86947793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 86947794 . G . PASS END=86947794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 86947795 . A . PASS END=86947795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 86947796 . T . PASS END=86947816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:9,0 chr2 86947817 . C . PASS END=86947817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 86947818 . G . PASS END=86947818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 86947819 . A . LowGQ END=86947819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr2 86947820 . G . PASS END=86947820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 86947821 . C . PASS END=86947835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,390:0,33,255:13,0 chr2 86947836 . C . PASS END=86947836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 86947837 . A . PASS END=86947851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 86947852 . A . PASS END=86947852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:12,0 chr2 86947853 . C . PASS END=86947853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 86947854 . G . PASS END=86947854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 86947855 . G . PASS END=86947873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 86947874 . C . PASS END=86947874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 86947875 . C . PASS END=86947880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr2 86947881 . G . LowGQ END=86947881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr2 86947882 . A . PASS END=86947885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 86947886 . C . PASS END=86947886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 86947887 . A . PASS END=86947888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 86947889 . C . PASS END=86947889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 86947890 . G . PASS END=86947890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 86947891 . A . PASS END=86947891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,390:0,8,255:10,0 chr2 86947892 . C . PASS END=86947895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 86947896 . A . PASS END=86947896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:9,0 chr2 86947897 . C . PASS END=86947912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 86947913 . C . LowGQ END=86947913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,333:6,0,255:10,0 chr2 86947914 . G . PASS END=86947923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 86947924 . A . PASS END=86947928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 86947929 . C . PASS END=86947929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:6,0 chr2 86947930 . A . PASS END=86947932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 86968050 . G . PASS END=86968192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:81:47:0,81,1215:0,141,255:40,0 chr2 86979019 . A . PASS END=86979020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr2 86979021 . T . PASS END=86979023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,928:0,81,255:28,0 chr2 86979024 . T . PASS END=86979024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 86979025 . G . PASS END=86979027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 86979028 . T . PASS END=86979030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 86979031 . G . PASS END=86979036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:31,0 chr2 86979037 . A . PASS END=86979037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1036:0,68,255:29,0 chr2 86979038 . G . PASS END=86979055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,98,255:37,0 chr2 86979056 . G . PASS END=86979092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:34:0,92,1288:0,92,255:37,0 chr2 86979093 . G A, 157.90 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,24,0:0,13,0:108:196,111,0,1394,111,1394:255,111,0:0,0:1.5790e+02,1.0790e+02,0.0000e+00,4.5000e+02,1.4267e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,23:0,0,19,18 chr2 86979094 . G . PASS END=86979102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1323:0,111,255:37,0 chr2 86979103 . G . PASS END=86979103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:34,0 chr2 86979104 . A . PASS END=86979130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:36:0,87,1327:0,87,255:37,0 chr2 86979131 . A . PASS END=86979149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1294:0,89,255:35,0 chr2 86979150 . T . PASS END=86979153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:26,0 chr2 86980581 . G . PASS END=86980681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,111,1665:0,134,255:40,0 chr2 86992150 . G . PASS END=86992294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:77:0,120,1800:0,217,255:40,0 chr2 86992295 . T . PASS END=86992316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:82:0,99,1485:0,218,255:40,0 chr2 86992982 . A . PASS END=86992985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,963:0,67,255:28,0 chr2 86992986 . T . PASS END=86992987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 86992988 . A . PASS END=86992988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 86992989 . G . PASS END=86993124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1103:0,82,255:40,0 chr2 86993125 . G . PASS END=86993140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,901:0,62,255:26,0 chr2 86993141 . G . PASS END=86993147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:25:0,47,810:0,47,255:19,0 chr2 86997146 . T . PASS END=86997233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:35:0,96,1258:0,105,255:40,0 chr2 86997234 . A . PASS END=86997234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1103:0,72,255:30,0 chr2 86997235 . A . PASS END=86997248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1180:0,85,255:33,0 chr2 86998681 . A . PASS END=86998711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:99:59:0,105,1800:0,105,255:40,0 chr2 86998712 . A . PASS END=86998835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:44:0,105,1575:0,127,255:40,0 chr2 87000471 . A . PASS END=87000534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,152,255:40,0 chr2 87013043 . T . PASS END=87013094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:49:0,117,1654:0,117,255:40,0 chr2 87015653 . C . PASS END=87015676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,148,255:40,0 chr2 87015677 . C . PASS END=87015683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,123,255:40,0 chr2 87016446 . T . PASS END=87016450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,692:0,57,255:19,0 chr2 87016451 . T . PASS END=87016451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 87016452 . T . PASS END=87016453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 87016454 . C . PASS END=87016458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 87016459 . A . PASS END=87016459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:22,0 chr2 87016460 . A . PASS END=87016460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:23,0 chr2 87016461 . G . PASS END=87016472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr2 87016473 . G . PASS END=87016481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1103:0,84,255:30,0 chr2 87016482 . G . PASS END=87016482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:28,0 chr2 87016483 . A . PASS END=87016491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:31,0 chr2 87016492 . A . PASS END=87016492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 87016493 . C . PASS END=87016493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 87016494 . A . PASS END=87016494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 87016495 . A . PASS END=87016518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1188:0,86,255:34,0 chr2 87016519 . G . PASS END=87016519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 87016520 . T . PASS END=87016525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 87016526 . T . PASS END=87016526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:29,0 chr2 87016527 . C . PASS END=87016537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:31,0 chr2 87016538 . T . PASS END=87016538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:29,0 chr2 87016539 . C . PASS END=87016542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 87016543 . C . PASS END=87016556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,81,255:26,0 chr2 87016757 . C . PASS END=87016757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 87016763 . C . PASS END=87016766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 87016767 . G . LowGQ END=87016769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:10:0,0,310:2,0,255:10,1 chr2 87016770 . C . PASS END=87016789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr2 87016790 . C . PASS END=87016800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,592:0,48,255:17,0 chr2 87016801 . A . PASS END=87016801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 87016802 . G . PASS END=87016803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 87016804 . G . PASS END=87016813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr2 87016814 . G . PASS END=87016814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:20,0 chr2 87016815 . C . PASS END=87016816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 87016817 . A . PASS END=87016817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 87016818 . C . PASS END=87016818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 87016819 . G . PASS END=87016819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr2 87016820 . C . PASS END=87016824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 87016825 . G . PASS END=87016825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 87016826 . T . PASS END=87016836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:24,0 chr2 87016837 . G . PASS END=87016837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 87016838 . T . PASS END=87016865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,854:0,72,255:24,0 chr2 87016866 . G . PASS END=87016866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 87016867 . G . PASS END=87016873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 87017447 . G . PASS END=87017447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 87017451 . C . PASS END=87017451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 87017452 . T . PASS END=87017452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 87017453 . G . PASS END=87017456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 87017457 . G . PASS END=87017457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 87017458 . G . PASS END=87017458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr2 87017459 . A . PASS END=87017459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 87017460 . A . PASS END=87017462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 87017463 . C . PASS END=87017463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 87017464 . C . PASS END=87017470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 87017471 . A . PASS END=87017471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 87017472 . A . PASS END=87017487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,648:0,60,255:23,0 chr2 87017488 . G . PASS END=87017488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 87017489 . A . PASS END=87017492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 87017493 . A . PASS END=87017493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 87017494 . G . PASS END=87017501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:24:0,63,945:0,68,255:26,0 chr2 87017502 . G . PASS END=87017509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr2 87017510 . C . PASS END=87017521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1016:0,71,255:26,0 chr2 87017522 . C . PASS END=87017531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,853:0,80,255:27,0 chr2 87017532 . C . PASS END=87017532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 87017533 . T . PASS END=87017544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr2 87017545 . G . PASS END=87017545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:27,0 chr2 87017546 . C . PASS END=87017547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 87017548 . C . PASS END=87017577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,900:0,64,255:25,0 chr2 87017578 . C . PASS END=87017578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr2 87017579 . T . PASS END=87017583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 87017584 . C . PASS END=87017584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr2 87017585 . G . PASS END=87017592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 87017593 . C . PASS END=87017593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:22,0 chr2 87017594 . T . PASS END=87017600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,984:0,68,255:26,0 chr2 87017601 . C . PASS END=87017601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr2 87017602 . C . PASS END=87017604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr2 87017605 . C . PASS END=87017607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 87017608 . C . PASS END=87017608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 87017609 . T . PASS END=87017609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:26,0 chr2 87017610 . C . PASS END=87017612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1045:0,71,255:26,0 chr2 87017613 . C . PASS END=87017613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 87017614 . C . PASS END=87017614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,1000:0,40,255:25,0 chr2 87017615 . G . PASS END=87017616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 87017617 . C . PASS END=87017617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr2 87017618 . T . PASS END=87017621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 87017622 . G . PASS END=87017622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:26,0 chr2 87017623 . C . PASS END=87017623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,756:0,15,255:24,0 chr2 87017624 . T . PASS END=87017625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 87017626 . G . PASS END=87017626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 87017627 . T . PASS END=87017630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,857:0,81,255:27,0 chr2 87017631 . G . PASS END=87017635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,894:0,64,255:26,0 chr2 87017636 . A . LowGQ END=87017636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,686:19,0,255:17,0 chr2 87017637 . G . PASS END=87017637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 87017638 . G . PASS END=87017638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,963:0,35,255:23,0 chr2 87017639 . T . PASS END=87017639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,85,255:26,0 chr2 87017640 . A . PASS END=87017644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:26,0 chr2 87017645 . A . PASS END=87017645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:42:30:0,42,889:0,42,255:22,0 chr2 87017646 . G . PASS END=87017646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 87017647 . G . PASS END=87017647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,812:0,53,255:21,0 chr2 87017648 . A . PASS END=87017648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:22,0 chr2 87017649 . A . LowGQ END=87017649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,6:28:0:28:0,0,604:38,0,255:17,0 chr2 87017650 . G . PASS END=87017656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,846:0,61,255:23,0 chr2 87017657 . C . PASS END=87017657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:11:26:0,11,645:0,11,255:18,0 chr2 87017658 . T . PASS END=87017658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,687:0,52,255:21,0 chr2 87017659 . G . PASS END=87017660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 87017661 . C . PASS END=87017661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,612:0,52,255:21,0 chr2 87017662 . G . PASS END=87017662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 87017663 . G . PASS END=87017663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 87017664 . C . PASS END=87017665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 87017666 . G . PASS END=87017666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,643:0,5,255:19,0 chr2 87017667 . C . PASS END=87017667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr2 87017668 . G . PASS END=87017668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,582:0,3,255:19,0 chr2 87017669 . C . PASS END=87017669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 87017670 . C . PASS END=87017670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,781:0,72,255:24,0 chr2 87017671 . G . PASS END=87017671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,597:0,38,255:22,0 chr2 87017672 . C . PASS END=87017677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,803:0,72,255:24,0 chr2 87017678 . T . PASS END=87017678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr2 87017679 . G . PASS END=87017684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 87017685 . G . PASS END=87017685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:22,0 chr2 87017686 . C . PASS END=87017689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 87017690 . G . PASS END=87017690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 87017691 . A . PASS END=87017726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,886:0,61,255:26,0 chr2 87017727 . A . PASS END=87017727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 87017728 . C . PASS END=87017733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr2 87017734 . C . PASS END=87017734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr2 87017735 . T . PASS END=87017735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:20,0 chr2 87017736 . C . PASS END=87017739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 87017740 . T . PASS END=87017740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,815:0,36,255:20,0 chr2 87017741 . G . PASS END=87017745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr2 87017746 . G . PASS END=87017746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 87017747 . C . PASS END=87017748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 87017749 . C . PASS END=87017749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 87017750 . A . PASS END=87017750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 87017751 . G . PASS END=87017767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,668:0,46,255:18,0 chr2 87017768 . A . PASS END=87017768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr2 87017769 . G . PASS END=87017769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 87017770 . C . PASS END=87017770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 87017771 . G . PASS END=87017771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:16,0 chr2 87017772 . G . PASS END=87017772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 87017773 . C . PASS END=87017773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 87017774 . G . PASS END=87017775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 87017776 . C . PASS END=87017787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:14:0,33,495:0,37,255:13,0 chr2 87017788 . G . PASS END=87017788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr2 87017789 . C . PASS END=87017791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 87017792 . G . PASS END=87017792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 87017793 . G . PASS END=87017804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,388:0,33,255:11,0 chr2 87017900 . G . LowGQ END=87017901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,371:0,0,255:14,0 chr2 87017902 . A . PASS END=87017902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 87017903 . G . LowGQ END=87017903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,418:2,0,255:12,0 chr2 87017904 . C . PASS END=87017904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 87017905 . A . LowGQ END=87017905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:13,0 chr2 87017906 . G . PASS END=87017906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,480:0,15,255:13,0 chr2 87017907 . C . PASS END=87017907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 87017908 . A . PASS END=87017908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:13,0 chr2 87017909 . A . PASS END=87017909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 87017910 . G . PASS END=87017910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:14,0 chr2 87017911 . G . PASS END=87017911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 87017912 . C . PASS END=87017913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 87017914 . A . PASS END=87017914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,465:0,15,255:13,0 chr2 87017915 . G . PASS END=87017915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,465:0,1,255:13,0 chr2 87017916 . C . PASS END=87017917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 87017918 . G . PASS END=87017919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 87017920 . A . LowGQ END=87017920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,410:10,0,255:13,0 chr2 87017921 . G . PASS END=87017922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:13,0 chr2 87017923 . A . PASS END=87017923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr2 87017924 . G . PASS END=87017924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 87017925 . C . PASS END=87017926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 87017927 . A . PASS END=87017928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,410:0,12,255:12,0 chr2 87017929 . G . PASS END=87017930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 87017931 . G . LowGQ END=87017931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,449:10,0,255:12,0 chr2 87017932 . G . PASS END=87017932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:12,0 chr2 87017933 . T . PASS END=87017933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr2 87017934 . C . PASS END=87017935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:11,0 chr2 87017936 . C . PASS END=87017936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 87017937 . T . LowGQ END=87017937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,441:10,0,255:11,0 chr2 87017938 . G . PASS END=87017940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,488:0,26,255:11,0 chr2 87017941 . A . PASS END=87017941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:11,0 chr2 87017942 . A . PASS END=87017942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr2 87017943 . G . PASS END=87017943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:11,0 chr2 87017944 . G . PASS END=87017946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 87017947 . A . LowGQ END=87017947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,434:2,0,255:13,0 chr2 87017948 . T . PASS END=87017948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 87042730 . C . PASS END=87042787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:42:0,88,1527:0,88,255:40,0 chr2 87042788 . T . PASS END=87042824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:37:0,96,1440:0,98,255:40,0 chr2 87042825 . T C,G, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0,0:1.000,0.000,0.000:36:0,16,0,0:0,20,0,0:105:193,108,0,1374,108,193,1395,108,1374,1395:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4011e+02,1.9311e+02,4.5000e+02,1.4012e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,16,20:0,0,18,18 chr2 87042826 . A . PASS END=87042838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1178:0,83,255:33,0 chr2 87042839 . G . PASS END=87042839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:29,0 chr2 87042840 . G . PASS END=87042841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 87049452 . T . PASS END=87049497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:80:0,120,1800:0,190,255:40,0 chr2 87069380 . T . PASS END=87069430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,131,255:40,0 chr2 87069431 . C T, 217.45 PASS DP=62;MQ=28.62;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,29,0:0,33,0:183:255,186,0,355,355,355:255,186,0:0,0:2.1745e+02,1.8311e+02,0.0000e+00,3.5222e+02,3.8699e+02,3.5523e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,37,25:0,0,30,32 chr2 87069432 . A . PASS END=87069468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,130,255:40,0 chr2 87069469 . C . PASS END=87069500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,140,255:40,0 chr2 87071755 . C . PASS END=87071767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,2:100:99:88:0,120,1800:0,255,255:40,0 chr2 87072045 . T . PASS END=87072054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 87072055 . A . PASS END=87072055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,942:0,48,255:27,0 chr2 87072056 . A . PASS END=87072060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 87072061 . G . PASS END=87072071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 87072072 . C . PASS END=87072077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 87072078 . C . PASS END=87072081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 87073807 . A . PASS END=87073814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1349:0,95,255:40,0 chr2 87073815 . T . PASS END=87073851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,116,1590:0,116,255:40,0 chr2 87073852 . C T, 45.10 PASS DP=45;MQ=61.56;MQRankSum=0.977;ReadPosRankSum=4.860;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,26,0:0.578,0.000:45:9,15,0:10,11,0:43:80,0,43,914,671,1585:255,0,255:17,0:4.5100e+01,2.4359e-04,4.5984e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,12,14:8,11,13,13 chr2 87073853 . G . PASS END=87073896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:35:0,89,1254:0,89,255:40,0 chr2 87080120 . C . PASS END=87080120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 87080121 . C . LowGQ END=87080121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr2 87080122 . T . PASS END=87080123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 87080124 . C . LowGQ END=87080124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:4,0,255:7,0 chr2 87080125 . T . PASS END=87080126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 87080127 . G . PASS END=87080127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 87080128 . G . PASS END=87080128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 87080129 . T . PASS END=87080135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr2 87080136 . C . PASS END=87080136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:12,0 chr2 87080137 . C . PASS END=87080139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 87080140 . G . PASS END=87080140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 87080141 . G . PASS END=87080151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr2 87080152 . A . PASS END=87080152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 87080153 . C . PASS END=87080158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr2 87080159 . T . PASS END=87080160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 87080161 . T . PASS END=87080161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 87080162 . T . PASS END=87080166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:24,0 chr2 87080167 . G . PASS END=87080167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 87080168 . T . PASS END=87080175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 87080176 . T . PASS END=87080176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 87080177 . T . PASS END=87080188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,864:0,72,255:24,0 chr2 87080189 . C . PASS END=87080189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 87080190 . A . PASS END=87080208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,740:0,66,255:22,0 chr2 87080209 . A . PASS END=87080209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,711:0,50,255:21,0 chr2 87085180 . C . PASS END=87085181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr2 87085182 . A . PASS END=87085183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 87085184 . A . PASS END=87085184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr2 87085185 . C . PASS END=87085186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 87085187 . C . PASS END=87085187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 87085188 . A . PASS END=87085195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 87085196 . T . PASS END=87085197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr2 87085198 . C . PASS END=87085201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 87085202 . C . PASS END=87085202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 87085203 . C . PASS END=87085209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:29,0 chr2 87085210 . T . PASS END=87085210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 87085211 . C . PASS END=87085217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr2 87085218 . G . PASS END=87085218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 87085219 . G . PASS END=87085345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1133:0,82,255:36,0 chr2 87085346 . A . PASS END=87085346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:33,0 chr2 87085347 . G . PASS END=87085355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1039:0,88,255:35,0 chr2 87085356 . G . PASS END=87085356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:33,0 chr2 87085357 . C . PASS END=87085358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1249:0,89,255:33,0 chr2 87085359 . G . PASS END=87085359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr2 87085360 . A . PASS END=87085383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:35:0,84,1343:0,84,255:36,0 chr2 87085384 . G . PASS END=87085384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr2 87085385 . G . PASS END=87085539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:38:0,85,1305:0,85,255:40,0 chr2 87088946 . C . PASS END=87088963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,604:0,48,255:17,0 chr2 87088964 . A G, 44.46 PASS DP=17;MQ=107.68;MQRankSum=-1.708;ReadPosRankSum=2.489;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,7,0:0.412,0.000:17:5,2,0:5,5,0:44:79,0,48,222,358,579:198,0,255:9,0:4.4462e+01,1.8975e-04,5.1000e+01,2.2158e+02,3.9237e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,3,4:4,6,4,3 chr2 87088965 . G . PASS END=87088971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 87088972 . C . PASS END=87088972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 87088973 . A . PASS END=87088974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 87088975 . A . PASS END=87088975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 87088976 . G . PASS END=87088978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 87088979 . G . PASS END=87088988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 87135092 . A . LowDepth END=87135139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 87140973 . A . PASS END=87140975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:32,0 chr2 87140976 . A . PASS END=87140976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr2 87140977 . G . PASS END=87141019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,94,255:37,0 chr2 87141020 . G . PASS END=87141033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr2 87141034 . C . PASS END=87141035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 87141036 . C . PASS END=87141036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 87141037 . C . PASS END=87141044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:17,0 chr2 87144614 . T . LowDepth;LowGQ END=87144661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87144670 . A . LowDepth;LowGQ END=87144747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87144748 . T . LowDepth;LowGQ END=87144801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,0,0:2,0 chr2 87149741 . T . LowDepth;LowGQ END=87149815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr2 87169360 . A . PASS END=87169427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1153:0,80,255:40,0 chr2 87169428 . A . PASS END=87169428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr2 87169429 . A . PASS END=87169431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 87178419 . A . PASS END=87178445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,791:0,69,255:23,0 chr2 87178446 . C . PASS END=87178446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 87178447 . T . PASS END=87178461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr2 87178462 . A . PASS END=87178473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr2 87178474 . T . PASS END=87178479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr2 87178480 . A . PASS END=87178483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 87180065 . A . LowDepth;LowGQ END=87180176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87180621 . C . LowDepth;LowGQ END=87180773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87184829 . G . PASS END=87184833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr2 87184834 . T . PASS END=87184834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr2 87184835 . C . PASS END=87184836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 87184837 . T . PASS END=87184837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:6,0 chr2 87184838 . C . PASS END=87184848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr2 87184849 . A . PASS END=87184902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,166:0,18,166:6,0 chr2 87184903 . A . PASS END=87184924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 87184925 . A . PASS END=87184929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 87184930 . C . PASS END=87184934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 87184935 . T . PASS END=87184935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr2 87184936 . A . PASS END=87184936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 87184937 . G . PASS END=87184951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:5:0,15,172:0,15,172:5,0 chr2 87184952 . T . LowGQ END=87184952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 87184953 . C . PASS END=87184967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,119:0,15,119:5,0 chr2 87184968 . A . LowGQ END=87184968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,110:4,0 chr2 87184969 . G . PASS END=87184971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 87184972 . T . LowGQ END=87184973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 87184974 . C . PASS END=87185017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr2 87185018 . T . LowGQ END=87185018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 87185019 . C . PASS END=87185033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 87185034 . A . LowGQ END=87185034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 87185035 . T . PASS END=87185042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 87185043 . T . PASS END=87185059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,55:0,6,55:2,0 chr2 87185405 . G . LowDepth;LowGQ END=87185550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87190152 . T . LowDepth;LowGQ END=87190347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87196351 . G . LowDepth;LowGQ END=87196438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87198870 . G . LowDepth;LowGQ END=87199079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87201196 . G . PASS END=87201261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:33:0,83,1186:0,83,255:40,0 chr2 87201262 . T . PASS END=87201272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:33:0,63,945:0,82,255:25,0 chr2 87201273 . C . PASS END=87201278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 87201279 . A . PASS END=87201307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr2 87201308 . T . PASS END=87201308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 87201309 . C . PASS END=87201309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 87201310 . A . PASS END=87201310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 87201311 . T . PASS END=87201311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 87201312 . T . PASS END=87201336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 87201337 . A . PASS END=87201344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr2 87201345 . G . PASS END=87201345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr2 87201346 . C . PASS END=87201372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr2 87201373 . T . PASS END=87201373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr2 87201374 . T . PASS END=87201377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 87201461 . G . PASS END=87201475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,536:0,40,255:17,0 chr2 87201476 . G . PASS END=87201476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 87201477 . T . PASS END=87201491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:18:6:0,18,210:0,18,210:6,0 chr2 87201492 . A . LowGQ END=87201492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:5,0 chr2 87201493 . C . PASS END=87201493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 87201494 . T . PASS END=87201494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 87201495 . T . PASS END=87201533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:8,0 chr2 87201534 . A . PASS END=87201534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 87201535 . T . PASS END=87201537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,252:0,24,252:9,0 chr2 87201538 . G . PASS END=87201538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 87201539 . C . PASS END=87201566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr2 87201567 . A . PASS END=87201604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:11:4:0,11,111:0,11,111:6,0 chr2 87201605 . G . LowGQ END=87201636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,78:0,0,94:3,0 chr2 87201804 . A . LowDepth;LowGQ END=87201927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87202851 . G . LowDepth;LowGQ END=87203009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87203276 . G . LowDepth;LowGQ END=87203413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87203676 . A . LowDepth;LowGQ END=87203822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87204703 . T . LowDepth;LowGQ END=87204764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87204765 . C . PASS END=87204834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr2 87204835 . A . PASS END=87204861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 87204862 . T . LowGQ END=87204862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 87204863 . C . PASS END=87204874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,148:0,15,148:6,0 chr2 87204875 . G . PASS END=87204882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 87204971 . T . PASS END=87204972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 87204973 . T . PASS END=87204974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 87204975 . C . PASS END=87204975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,127:0,4,127:4,0 chr2 87204976 . T . PASS END=87204976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 87204977 . C . PASS END=87204977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr2 87204978 . C . PASS END=87204983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 87204984 . C . PASS END=87204985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 87204986 . C . PASS END=87204986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 87204987 . C . PASS END=87205000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,205:0,21,205:8,0 chr2 87205001 . G . PASS END=87205012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,250:0,24,250:8,0 chr2 87205013 . T . PASS END=87205013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 87205014 . C . PASS END=87205014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 87205015 . T . PASS END=87205054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr2 87208206 . A . LowDepth;LowGQ END=87208323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87211877 . T . PASS END=87211877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:27,0 chr2 87211878 . T . PASS END=87211878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 87211879 . G . PASS END=87211880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,775:0,64,255:26,0 chr2 87211881 . A . PASS END=87211882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 87211883 . C . PASS END=87211883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:14:27:0,14,706:0,14,255:23,0 chr2 87211884 . T . PASS END=87211884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,785:0,48,255:25,0 chr2 87211885 . A . PASS END=87211886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,822:0,80,255:27,0 chr2 87211887 . T . PASS END=87211887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr2 87211888 . G . PASS END=87211888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 87211889 . G . PASS END=87211891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 87211892 . C . PASS END=87211893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 87211894 . T . PASS END=87211894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,891:0,81,255:27,0 chr2 87211895 . C . PASS END=87211896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,826:0,64,255:26,0 chr2 87211897 . G . PASS END=87211898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,823:0,48,255:24,0 chr2 87211899 . A . PASS END=87211907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,805:0,64,255:26,0 chr2 87211908 . T . PASS END=87211908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,766:0,28,255:23,0 chr2 87211909 . C . PASS END=87211909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,821:0,45,255:24,0 chr2 87211910 . A . PASS END=87211916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,838:0,61,255:26,0 chr2 87211917 . A . PASS END=87211920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:26,0 chr2 87211921 . T . PASS END=87211921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,799:0,45,255:24,0 chr2 87211922 . A . PASS END=87211924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,834:0,78,255:26,0 chr2 87211925 . A . PASS END=87211925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,821:0,45,255:24,0 chr2 87211926 . T . PASS END=87211927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,809:0,61,255:25,0 chr2 87211928 . C . PASS END=87211928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,778:0,45,255:23,0 chr2 87211929 . C . PASS END=87211932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,811:0,61,255:25,0 chr2 87211933 . T . PASS END=87211933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:30:26:0,30,750:0,30,255:21,0 chr2 87211934 . A . PASS END=87211935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,840:0,61,255:22,0 chr2 87211936 . C . PASS END=87211936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,840:0,39,255:20,0 chr2 87211937 . T . PASS END=87211937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:20,0 chr2 87211938 . T . PASS END=87211939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,801:0,61,255:21,0 chr2 87211940 . T . PASS END=87211940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:19,0 chr2 87211941 . C . PASS END=87211941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 87211942 . A . PASS END=87211942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:18,0 chr2 87211943 . G . PASS END=87211945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 87211946 . C . PASS END=87211946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr2 87211947 . A . PASS END=87211952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:20:0,30,450:0,30,255:13,0 chr2 87211953 . T . PASS END=87211953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,576:0,5,255:9,0 chr2 87211954 . A . PASS END=87211959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:17:0,21,315:0,37,255:9,0 chr2 87211960 . A . PASS END=87211960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:7,0 chr2 87211961 . C . PASS END=87211961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 87211962 . T . PASS END=87211962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:8,0 chr2 87211963 . C . PASS END=87211965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:9,0 chr2 87211966 . A . PASS END=87211966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,321:0,5,255:7,0 chr2 87211967 . C . PASS END=87211969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:7,0 chr2 87211970 . A . PASS END=87211971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,260:0,16,255:7,0 chr2 87212699 . G . LowDepth;LowGQ END=87213508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87213509 . C . LowGQ END=87213734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:1:0,0,31:0,0,31:3,0 chr2 87213735 . C . PASS END=87213752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr2 87213753 . A . PASS END=87213753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 87213754 . T . PASS END=87213776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 87213777 . A . PASS END=87213786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr2 87213787 . T . PASS END=87213787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 87213788 . A . PASS END=87213788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 87213789 . G . PASS END=87213799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:12,0 chr2 87213800 . G . PASS END=87213897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,479:0,41,255:19,0 chr2 87213898 . G . PASS END=87213909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr2 87213910 . G . PASS END=87213910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:24,0 chr2 87213911 . T . PASS END=87213924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,917:0,75,255:26,0 chr2 87213925 . G . PASS END=87213927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 87213928 . T . PASS END=87213930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 87213931 . G . PASS END=87214181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:96:36:0,96,1440:0,107,255:40,0 chr2 87214182 . T . PASS END=87214218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,878:0,67,255:26,0 chr2 87214219 . C . PASS END=87214276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,409:0,54,255:19,0 chr2 87214277 . T . PASS END=87214297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:21:8:0,21,315:0,24,255:9,0 chr2 87214298 . T . PASS END=87214298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,231:0,10,231:8,0 chr2 87214299 . T . PASS END=87214304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr2 87214305 . A . PASS END=87214321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,321:0,33,255:11,0 chr2 87214322 . G . PASS END=87214376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 87214377 . T . PASS END=87214377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 87214378 . T . PASS END=87214434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:9,0 chr2 87214435 . T . PASS END=87214439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 87214440 . C . PASS END=87214440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr2 87214441 . A . PASS END=87214443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:5,0 chr2 87214444 . C . LowDepth;LowGQ END=87214922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 87215810 . G . PASS END=87215908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,117:0,12,117:5,0 chr2 87215909 . T . PASS END=87215913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 87221964 . A . LowDepth;LowGQ END=87222051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr2 87222052 . C . LowDepth;LowGQ END=87222103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87222786 . T . LowDepth;LowGQ END=87222833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87224686 . C . PASS END=87224729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,149:0,12,149:6,0 chr2 87224730 . G . PASS END=87224746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 87224747 . A . PASS END=87224758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 87224759 . A . PASS END=87224770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 87224771 . A . PASS END=87224771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 87224772 . G . PASS END=87224776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr2 87224777 . T . PASS END=87224780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 87224781 . C . PASS END=87224783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 87224784 . G C, 14.06 PASS DP=11;MQ=14.00;MQRankSum=2.637;ReadPosRankSum=2.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,5,0:0.455,0.000:11:1,3,0:5,2,0:12:49,0,14,178,206,385:161,0,192:5,0:1.4062e+01,2.5966e-01,1.7260e+01,1.7869e+02,2.4147e+02,3.8813e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,0,5,0:1,5,3,2 chr2 87224785 . A . PASS END=87224788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr2 87224789 . C . PASS END=87224790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 87224791 . G . PASS END=87224792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 87224793 . T . PASS END=87224793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 87224794 . A . PASS END=87224795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 87224796 . T . PASS END=87224796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 87224797 . G . PASS END=87224805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr2 87224806 . A . PASS END=87224806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,320:0,22,255:12,0 chr2 87224807 . G . PASS END=87224821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 87224822 . T . PASS END=87224866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:13,0 chr2 87224867 . C . PASS END=87224867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 87224868 . T . PASS END=87224868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 87224869 . G . PASS END=87224869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 87224870 . C . PASS END=87224872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 87224873 . T . PASS END=87224878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 87224879 . A . PASS END=87224879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,399:0,28,255:13,0 chr2 87224880 . A . PASS END=87224881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 87239636 . G . LowDepth;LowGQ END=87239648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87239649 . C . LowDepth END=87239670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr2 87243426 . T . PASS END=87243438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1119:0,83,255:32,0 chr2 87243439 . A . PASS END=87243439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr2 87243440 . A . PASS END=87243453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1042:0,93,255:31,0 chr2 87243454 . A . PASS END=87243482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,925:0,75,255:26,0 chr2 87243483 . T . PASS END=87243483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 87243484 . T . PASS END=87243502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:24,0 chr2 87243503 . G . PASS END=87243503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 87243504 . T . PASS END=87243504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:19,0 chr2 87243505 . T . PASS END=87243521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr2 87243522 . T . PASS END=87243528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 87243529 . G . PASS END=87243531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr2 87244629 . C . LowGQ END=87244671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,55:0,0,55:3,0 chr2 87244672 . A . PASS END=87244711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr2 87244712 . G . LowGQ END=87244784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,31:3,0 chr2 87244785 . C . LowDepth;LowGQ END=87244811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87248858 . C . PASS END=87248879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 87248880 . T . LowGQ END=87248880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 87248881 . A . PASS END=87248881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 87248882 . G . LowGQ END=87248882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 87248883 . A . PASS END=87248901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 87248902 . T . LowGQ END=87248902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 87248903 . C . PASS END=87248906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 87352285 . A . PASS END=87352296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:32,0 chr2 87352297 . T . PASS END=87352297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr2 87352298 . T . PASS END=87352313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:91:33:0,91,1128:0,91,255:37,0 chr2 87352314 . C T, 1.90 DRAGENSnpHardQUAL DP=37;MQ=38.17;MQRankSum=-4.768;ReadPosRankSum=2.442;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:26,11,0:0.297,0.000:37:12,3,0:14,8,0:4:32,0,41,380,922,1301:255,0,255:26,0:1.9032e+00,4.5000e+00,4.8625e+01,3.8400e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,12,7,4:10,16,7,4 chr2 87352315 . T . PASS END=87352334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:38:0,106,1354:0,106,255:40,0 chr2 87352335 . A . PASS END=87352335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:53:51:0,53,1459:0,53,255:40,0 chr2 87352336 . T . PASS END=87352351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:52:0,120,1800:0,136,255:40,0 chr2 87352352 . T . PASS END=87352395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:58:0,120,1800:0,128,255:40,0 chr2 87355670 . G . PASS END=87355673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,817:0,69,255:24,0 chr2 87355674 . G . PASS END=87355674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 87355675 . G . PASS END=87355688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,826:0,62,255:26,0 chr2 87355689 . A . PASS END=87355690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 87355691 . T . PASS END=87355692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:24,0 chr2 87355693 . A . PASS END=87355693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:23,0 chr2 87355694 . G . PASS END=87355698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 87355699 . C . PASS END=87355719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1019:0,80,255:39,0 chr2 87355720 . T . PASS END=87355720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1396:0,76,255:38,0 chr2 87355721 . C . PASS END=87355938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:41:0,102,1460:0,102,255:40,1 chr2 87357226 . G . PASS END=87357317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:37:0,84,1260:0,101,255:40,0 chr2 87359092 . G . PASS END=87359113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,521:0,45,255:19,0 chr2 87359114 . T . PASS END=87359123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,624:0,60,255:21,0 chr2 87359124 . T . PASS END=87359124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,615:0,46,255:20,0 chr2 87359125 . T . PASS END=87359128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 87359129 . G A, 41.00 PASS DP=21;MQ=34.35;MQRankSum=0.035;ReadPosRankSum=2.500;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,11,0:0.524,0.000:21:5,6,0:5,5,0:39:76,0,41,385,350,735:255,0,255:10,0:4.1001e+01,5.3794e-04,4.3522e+01,3.8535e+02,3.8433e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,5,6:3,7,2,9 chr2 87359130 . T . PASS END=87359141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr2 87359142 . A . PASS END=87359142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 87359143 . G . PASS END=87359145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,931:0,65,255:26,0 chr2 87359146 . T . PASS END=87359151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 87359152 . A . PASS END=87359152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 87359153 . G . PASS END=87359166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,993:0,81,255:29,0 chr2 87359167 . G . PASS END=87359169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 87359170 . T . PASS END=87359203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,767:0,60,255:26,0 chr2 87359204 . C . PASS END=87359204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 87359205 . C . PASS END=87359211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:21,0 chr2 87359212 . T . PASS END=87359212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 87359213 . C . PASS END=87359229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,884:0,62,255:26,0 chr2 87359230 . T . PASS END=87359230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 87359231 . T . PASS END=87359236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:25,0 chr2 87359237 . C . PASS END=87359237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:23,0 chr2 87359238 . T . PASS END=87359240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,80,255:24,0 chr2 87364690 . A . PASS END=87364768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:47:0,120,1800:0,141,255:40,0 chr2 87365379 . C . PASS END=87365405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:50:0,120,1800:0,142,255:40,0 chr2 87365406 . T A, 0.00 DRAGENSnpHardQUAL DP=61;MQ=29.84;MQRankSum=-0.801;ReadPosRankSum=2.681;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:53,8,0:0.131,0.000:61:25,2,0:28,6,0:30:5,0,41,286,1879,2165:162,0,255:40,0:4.6423e-03,2.9713e+01,7.3838e+01,3.1591e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,31,0,8:24,29,6,2 chr2 87365407 . G . PASS END=87365415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,124,255:40,0 chr2 87365510 . G . PASS END=87365580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:68:0,120,1800:0,153,255:40,0 chr2 87367950 . G . PASS END=87367959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 87367960 . A . PASS END=87367960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr2 87367961 . A . PASS END=87367972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 87367973 . A . PASS END=87367973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 87367974 . C . PASS END=87367983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:18,0 chr2 87367984 . T . PASS END=87367984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 87367985 . G . PASS END=87368001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 87368002 . C . PASS END=87368002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 87368003 . A . PASS END=87368014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,577:0,54,255:18,0 chr2 87368015 . T . PASS END=87368015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr2 87368016 . A . PASS END=87368021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 87368022 . G . PASS END=87368022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 87368023 . T . PASS END=87368042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr2 87368043 . A . PASS END=87368043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:17,0 chr2 87368044 . C . PASS END=87368082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,521:0,40,255:19,0 chr2 87368083 . T . PASS END=87368092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 87368093 . C . PASS END=87368093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr2 87368094 . A . PASS END=87368100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 87368101 . C . PASS END=87368101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 87368102 . G . PASS END=87368119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,374:0,30,255:11,0 chr2 87368120 . G . PASS END=87368128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr2 87371142 . G . PASS END=87371197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1033:0,80,255:37,0 chr2 87371198 . G . PASS END=87371198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr2 87371199 . A . PASS END=87371222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1305:0,96,255:35,0 chr2 87371223 . T . PASS END=87371243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1180:0,90,255:32,0 chr2 87371244 . T . PASS END=87371244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1078:0,57,255:30,0 chr2 87371245 . T . PASS END=87371259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1169:0,80,255:30,0 chr2 87371260 . T C, 42.09 PASS DP=30;MQ=52.92;MQRankSum=1.004;ReadPosRankSum=-0.628;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,13,0:0.433,0.000:30:6,4,0:11,9,0:40:77,0,41,465,600,1065:255,0,255:16,0:4.2089e+01,4.3646e-04,4.4125e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,13,5,8:9,8,8,5 chr2 87371261 . G . PASS END=87371261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 87371262 . C . PASS END=87371262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 87371263 . G . PASS END=87371263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 87371264 . A . PASS END=87371276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:26,0 chr2 87371277 . A . PASS END=87371282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,62,255:19,0 chr2 87371283 . C . PASS END=87371290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 87371291 . C . PASS END=87371301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:18,0 chr2 87371302 . T . PASS END=87371316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr2 87371317 . A . PASS END=87371317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 87371318 . G . PASS END=87371327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 87371328 . C . PASS END=87371328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr2 87371329 . A . PASS END=87371338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 87371339 . C T, 29.01 PASS DP=12;MQ=30.38;MQRankSum=0.143;ReadPosRankSum=1.932;FractionInformativeReads=0.917;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,6,0:0.545,0.000:11:2,2,0:3,4,0:28:64,0,34,215,179,393:213,0,158:5,0:2.9006e+01,6.3026e-03,3.7142e+01,2.1456e+02,2.1360e+02,3.9639e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,4,1,5:2,3,5,1 chr2 87371340 . G . PASS END=87371343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 87371344 . A . PASS END=87371344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 87371345 . A . PASS END=87371351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 87371352 . A . PASS END=87371352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 87371353 . A . PASS END=87371356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 87373634 . A . PASS END=87373752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,143,255:40,0 chr2 87376958 . G . PASS END=87376961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:17,0 chr2 87376962 . T . PASS END=87376962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 87376963 . G . PASS END=87376968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 87376969 . C . PASS END=87376969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 87376970 . C . PASS END=87376976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:19,0 chr2 87376977 . C . PASS END=87376988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:24,0 chr2 87376989 . C . PASS END=87377229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:30:0,87,1119:0,90,255:40,0 chr2 87383403 . G . LowDepth;LowGQ END=87383637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 87386686 . G . PASS END=87386693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,119:0,15,119:5,0 chr2 87386694 . C . PASS END=87386743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:6,0 chr2 87386744 . T . PASS END=87386744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,139:0,1,139:4,0 chr2 87386745 . G . PASS END=87386756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr2 87386757 . C . PASS END=87386777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr2 87388740 . C . PASS END=87388791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr2 87388792 . A . PASS END=87388799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 87388800 . A . LowGQ END=87388800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 87388801 . T . PASS END=87388854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,88:0,12,88:5,0 chr2 87388855 . C . PASS END=87388874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,55:0,6,55:3,0 chr2 87389049 . G . LowGQ END=87389088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,39:0,0,46:3,0 chr2 87389089 . C . PASS END=87389122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr2 87389123 . C . LowGQ END=87389123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:16,0,132:4,0 chr2 87389124 . A . PASS END=87389131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 87390073 . A . PASS END=87390096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:25,0 chr2 87390097 . C . PASS END=87390099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 87390100 . T . PASS END=87390100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 87390101 . G . PASS END=87390107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 87390108 . T . PASS END=87390108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr2 87390109 . G . PASS END=87390109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 87390110 . T . PASS END=87390110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:25,0 chr2 87390111 . A . PASS END=87390113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 87390114 . T . PASS END=87390114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 87390115 . G . PASS END=87390115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 87390116 . T . PASS END=87390116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 87390117 . T . PASS END=87390118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 87390119 . G . PASS END=87390123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,820:0,64,255:26,0 chr2 87390124 . T . PASS END=87390135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:30,0 chr2 87390136 . A . PASS END=87390136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 87390137 . T . PASS END=87390149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 87390150 . G . PASS END=87390150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 87390151 . G . PASS END=87390151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 87391707 . A . PASS END=87391767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,593:0,54,255:19,0 chr2 87391768 . G . PASS END=87391768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 87391769 . C . PASS END=87391771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 87391772 . T . PASS END=87391772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr2 87391773 . G . PASS END=87391773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 87391774 . T . PASS END=87391778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:13,0 chr2 87391779 . C . PASS END=87391779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:11,0 chr2 87391780 . A . PASS END=87391780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:11,0 chr2 87391781 . A . PASS END=87391781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 87392881 . G . PASS END=87392890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr2 87392891 . T . PASS END=87392913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr2 87392914 . C . PASS END=87392914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr2 87392915 . T . PASS END=87392924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 87392925 . A . LowGQ END=87392925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,155:9,0,164:6,0 chr2 87392926 . A . PASS END=87392934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,294:0,24,255:9,0 chr2 87392935 . G . PASS END=87392935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 87392936 . G . PASS END=87392940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr2 87392941 . T . PASS END=87392941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 87392942 . G . PASS END=87392946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 87392947 . A . PASS END=87392947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:7,0 chr2 87392948 . C . PASS END=87392956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr2 87392957 . A . PASS END=87392957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 87392958 . T . PASS END=87392968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr2 87392969 . T . PASS END=87392969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 87392970 . G . PASS END=87392970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 87392971 . A . PASS END=87392994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr2 87397694 . A . PASS END=87397765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:30:0,81,1158:0,85,255:38,0 chr2 87397766 . T . PASS END=87397766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 87397767 . T . PASS END=87397770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 87398266 . C . PASS END=87398317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:42:0,82,1443:0,82,255:40,0 chr2 87565634 . A . PASS END=87565682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:96:0,120,1800:0,255,255:40,0 chr2 87565858 . A . PASS END=87565886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1296:0,92,255:37,0 chr2 87565887 . T . PASS END=87565887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:26,0 chr2 87565888 . C . PASS END=87565892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr2 87565893 . G . PASS END=87565918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 87565919 . A . PASS END=87565920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 87565921 . G . PASS END=87565931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,786:0,63,255:22,0 chr2 87565932 . T . PASS END=87565980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,535:0,41,255:19,0 chr2 87565981 . A . PASS END=87565981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 87565982 . G . PASS END=87565990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 87565991 . T . PASS END=87566011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 87566012 . C . PASS END=87566015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 87566016 . T . PASS END=87566016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 87566017 . A . PASS END=87566018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 87566019 . G . PASS END=87566019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr2 87566020 . G . PASS END=87566055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:18,0 chr2 87566056 . T . PASS END=87566056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 87566057 . C . PASS END=87566060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 87566061 . G . PASS END=87566061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 87566062 . G . PASS END=87566082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr2 88007295 . A . PASS END=88007299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 88007300 . T . PASS END=88007300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 88007301 . C . PASS END=88007302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 88007303 . T . PASS END=88007306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 88007307 . T . PASS END=88007307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr2 88007308 . C . PASS END=88007313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,908:0,84,255:28,0 chr2 88007314 . T . PASS END=88007316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 88007317 . C . PASS END=88007323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 88007324 . G . PASS END=88007324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 88007325 . C . PASS END=88007332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:29,0 chr2 88007333 . T . PASS END=88007333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 88007334 . A . PASS END=88007339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 88007340 . C . PASS END=88007358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1127:0,87,255:31,0 chr2 88007359 . T . PASS END=88007359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 88007360 . G . PASS END=88007371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 88007372 . A . PASS END=88007376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr2 88007377 . C T, 28.26 PASS DP=27;MQ=23.24;MQRankSum=-0.805;ReadPosRankSum=0.610;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:7,7,0:8,5,0:27:63,0,32,392,507,899:255,0,255:14,0:2.8263e+01,7.7559e-03,3.5341e+01,3.9239e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,1,11:8,7,4,8 chr2 88007378 . G . PASS END=88007398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 88007399 . A . PASS END=88007399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 88007400 . A . PASS END=88007407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 88007408 . A . PASS END=88007408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:20,0 chr2 88007409 . A . PASS END=88007410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 88007411 . A . PASS END=88007411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 88007412 . A . PASS END=88007412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 88007413 . G . PASS END=88007414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 88007415 . A . PASS END=88007419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,743:0,60,255:20,0 chr2 88007420 . T . PASS END=88007427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 88007428 . T . PASS END=88007428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 88007429 . G . PASS END=88007429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 88012878 . A . PASS END=88012956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:50:0,120,1800:0,149,255:40,0 chr2 88013567 . C . PASS END=88013603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:133,0:133:99:122:0,120,1800:0,255,255:40,0 chr2 88013698 . G . PASS END=88013711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:86:0,120,1800:0,229,255:40,0 chr2 88013712 . A . PASS END=88013768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:74:0,120,1800:0,216,255:40,0 chr2 88016131 . G . PASS END=88016133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 88016134 . T . PASS END=88016137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr2 88016138 . T . PASS END=88016138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,676:0,36,255:20,0 chr2 88016139 . T . PASS END=88016146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 88016147 . T . PASS END=88016154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 88016155 . C . PASS END=88016163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr2 88016164 . T . PASS END=88016164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 88016165 . T . PASS END=88016176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,848:0,69,255:26,0 chr2 88016177 . T . PASS END=88016291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1055:0,84,255:40,0 chr2 88016292 . T . PASS END=88016292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr2 88016293 . T . PASS END=88016303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1134:0,85,255:33,0 chr2 88016304 . A . PASS END=88016309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 88019326 . G . PASS END=88019481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:36:0,90,1350:0,99,255:40,0 chr2 88019482 . A . PASS END=88019482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:30,0 chr2 88019483 . A . PASS END=88019485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:29,0 chr2 88019486 . T . PASS END=88019492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:32:0,66,990:0,86,255:25,0 chr2 88019493 . G . PASS END=88019494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:32:0,57,855:0,96,255:19,0 chr2 88019495 . A . PASS END=88019500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:20,0 chr2 88019501 . A . PASS END=88019517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,540:0,43,255:19,0 chr2 88019518 . T . PASS END=88019519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 88019520 . C . PASS END=88019540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:17,0 chr2 88021820 . A . LowDepth;LowGQ END=88021938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88025456 . G . PASS END=88025479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 88025480 . C . PASS END=88025502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,205:6,0 chr2 88025503 . A . PASS END=88025542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 88025543 . A . PASS END=88025543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 88025544 . T . PASS END=88025593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 88025594 . C . PASS END=88025594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 88025595 . A . PASS END=88025604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 88025605 . G . PASS END=88025605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 88025606 . T . PASS END=88025607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,203:0,21,203:7,0 chr2 88025608 . T . PASS END=88025623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,172:5,0 chr2 88025624 . A . LowGQ END=88025624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr2 88025625 . T . PASS END=88025625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 88025626 . G . LowGQ END=88025727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,45:0,0,55:3,0 chr2 88031906 . G . PASS END=88031973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,117:0,12,117:6,0 chr2 88031974 . G . PASS END=88032014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 88032015 . T . LowGQ END=88032015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,218:7,0,225:7,0 chr2 88032016 . A . PASS END=88032021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr2 88032022 . A . PASS END=88032064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr2 88032065 . G . PASS END=88032065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 88032066 . C . PASS END=88032109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,133:0,15,133:6,0 chr2 88032110 . C . PASS END=88032110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 88032111 . A . PASS END=88032111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr2 88032112 . T . PASS END=88032112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 88032113 . A . PASS END=88032123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr2 88032124 . C . LowGQ END=88032124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:5,0 chr2 88032125 . C . PASS END=88032140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 88035193 . G . PASS END=88035284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,102,1530:0,107,255:40,0 chr2 88037237 . C . PASS END=88037358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:81:32:0,81,1215:0,96,255:40,0 chr2 88037359 . T . PASS END=88037370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,74,255:26,0 chr2 88037371 . A . PASS END=88037371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:17,0 chr2 88037542 . G . PASS END=88037545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 88037546 . G . PASS END=88037546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 88037547 . A . PASS END=88037548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 88037549 . A . PASS END=88037549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 88037550 . T . PASS END=88037581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:16,0 chr2 88037582 . C . PASS END=88037582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 88037583 . T . PASS END=88037623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,505:0,45,255:15,0 chr2 88037624 . G . PASS END=88037624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 88038536 . T . LowDepth END=88038545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr2 88047673 . A . PASS END=88047697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 88047698 . T . PASS END=88047698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 88047699 . A . PASS END=88047721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,590:0,51,255:17,0 chr2 88051766 . G . LowDepth;LowGQ END=88051901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88053047 . G . PASS END=88053055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr2 88053056 . A . PASS END=88053078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,238:9,0 chr2 88053079 . G . PASS END=88053084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 88053085 . T . PASS END=88053111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 88053112 . T . PASS END=88053129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr2 88053130 . A . PASS END=88053130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 88053131 . T . PASS END=88053146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 88053147 . A . PASS END=88053147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 88053148 . A . PASS END=88053152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 88056911 . C . LowDepth;LowGQ END=88056945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88071684 . C . PASS END=88071689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 88071690 . T . PASS END=88071690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1235:0,67,255:30,0 chr2 88071691 . G . PASS END=88071704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,89,255:33,0 chr2 88071705 . A . PASS END=88071712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,89,255:26,0 chr2 88071713 . C . PASS END=88071714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr2 88071715 . T . PASS END=88071723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:23,0 chr2 88071724 . G . PASS END=88071724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:20,0 chr2 88071725 . G . PASS END=88071747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr2 88071748 . T . PASS END=88071760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 88071761 . G . PASS END=88071784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,660:0,46,255:19,0 chr2 88071785 . C G, 2.45 DRAGENSnpHardQUAL DP=16;MQ=14.03;MQRankSum=-0.942;ReadPosRankSum=0.807;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:13,3,0:0.188,0.000:16:5,1,0:8,2,0:4:34,0,19,107,436,543:68,0,255:13,0:2.4518e+00,3.6788e+00,2.5679e+01,1.1094e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,12,0,3:9,4,2,1 chr2 88071786 . A . PASS END=88071822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,482:0,42,255:17,0 chr2 88071823 . C . PASS END=88071824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 88071825 . A . PASS END=88071835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 88071836 . A . PASS END=88071842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:11:0,21,315:0,33,255:9,0 chr2 88071843 . T . PASS END=88071843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:7,0 chr2 88071844 . C . PASS END=88071870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,242:0,21,242:8,0 chr2 88071871 . C . PASS END=88071883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,202:6,0 chr2 88074463 . C . LowDepth;LowGQ END=88074602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88080653 . T . PASS END=88080669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr2 88080670 . G . PASS END=88080695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 88080696 . G . PASS END=88080712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 88080713 . C . PASS END=88080713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 88080714 . C . PASS END=88080743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,189:0,21,189:7,0 chr2 88080744 . C . PASS END=88080749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 88080750 . T . PASS END=88080750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 88080751 . T . PASS END=88080756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,202:5,0 chr2 88081643 . C . LowDepth;LowGQ END=88081678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88081679 . A . LowDepth;LowGQ END=88082067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr2 88082068 . G . LowDepth END=88082102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr2 88082103 . T C, 2.15 DRAGENSnpHardQUAL DP=2;MQ=14.00;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:1,0,0:0,1,0:4:33,0,14,36,36,71:33,0,33:1,0:2.1461e+00,4.1773e+00,2.1177e+01,3.9926e+01,7.4635e+01,7.8613e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,1,0:1,0,0,1 chr2 88082104 . G . PASS END=88082110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,70:0,6,70:3,0 chr2 88082111 . C . PASS END=88082134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr2 88082135 . C . PASS END=88082138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 88082139 . A . PASS END=88082140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 88082141 . G . PASS END=88082153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr2 88082154 . A . PASS END=88082223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 88082224 . A . PASS END=88082224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 88082225 . A . PASS END=88082232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 88082233 . G . PASS END=88082235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 88082236 . A . LowGQ END=88082236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:9,0 chr2 88082237 . A . PASS END=88082248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,335:0,30,255:12,0 chr2 88082249 . T . PASS END=88082260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr2 88082261 . C . PASS END=88082261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr2 88082262 . T . PASS END=88082262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 88082263 . G . PASS END=88082266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 88082267 . A . PASS END=88082267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,166:0,7,166:7,0 chr2 88082268 . A . PASS END=88082272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr2 88082273 . A . PASS END=88082277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 88082278 . G . PASS END=88082278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 88082279 . T . PASS END=88082279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 88082280 . C . PASS END=88082283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 88082284 . A . PASS END=88082284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:14,0 chr2 88082285 . C . PASS END=88082295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,685:0,60,255:23,0 chr2 88082296 . T . PASS END=88082296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 88082297 . C . PASS END=88082303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,939:0,72,255:25,0 chr2 88082304 . T . PASS END=88082304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 88082305 . T . PASS END=88082309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr2 88082310 . A . PASS END=88082310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 88082311 . T . PASS END=88082318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 88082319 . A . PASS END=88082319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,509:0,57,255:23,0 chr2 88082320 . C . PASS END=88082323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,909:0,78,255:26,0 chr2 88082324 . T . PASS END=88082342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:32,0 chr2 88082343 . A . PASS END=88082343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 88082344 . T . PASS END=88082344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 88082345 . T . PASS END=88082345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1086:0,49,255:30,0 chr2 88082346 . G . PASS END=88082639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:80:32:0,80,1161:0,80,255:40,0 chr2 88082640 . C . PASS END=88082650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 88082651 . G . PASS END=88082659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,56,255:18,0 chr2 88082660 . A . PASS END=88082661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 88082662 . A . PASS END=88082676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,676:0,43,255:18,0 chr2 88082677 . T . PASS END=88082677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:16,0 chr2 88082678 . T . PASS END=88082702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,698:0,54,255:19,0 chr2 88082703 . T . PASS END=88082704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 88082705 . A . PASS END=88082715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 88082716 . C . PASS END=88082716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 88082717 . G . PASS END=88082722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 88082723 . T . PASS END=88082723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 88082724 . A . PASS END=88082754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,443:0,45,255:17,0 chr2 88082755 . G . PASS END=88082756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:27:16:0,27,405:0,32,255:9,0 chr2 88082757 . A . PASS END=88082764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,31,255:10,0 chr2 88082765 . C . PASS END=88082779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 88082780 . C . LowGQ END=88082780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:7,0 chr2 88082781 . A . PASS END=88082797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr2 88082798 . C . PASS END=88082823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr2 88082824 . T . PASS END=88082848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr2 88082849 . G . PASS END=88082865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:5,0 chr2 88082866 . G . LowGQ END=88082881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:3:0,0,108:0,0,108:3,0 chr2 88082882 . C . PASS END=88082883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 88082884 . G . LowGQ END=88082884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 88082885 . C . PASS END=88082896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 88082897 . A . LowGQ END=88083032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,16:3,0 chr2 88083033 . A . LowDepth;LowGQ END=88083544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88083545 . A . LowDepth;LowGQ END=88083633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:0:1:0,0,16:0,0,16:3,0 chr2 88083634 . G . PASS END=88083652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr2 88083653 . A . PASS END=88083680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:9,0 chr2 88083681 . A . PASS END=88083682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 88083683 . T . PASS END=88083685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 88083686 . C . PASS END=88083687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 88083688 . C . PASS END=88083688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 88083689 . C . PASS END=88083710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:12,0 chr2 88083711 . A . PASS END=88083791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,476:0,42,255:18,0 chr2 88083792 . A . PASS END=88083792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 88083793 . A . PASS END=88083845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 88083846 . A . PASS END=88083848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr2 88083849 . T . PASS END=88083853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 88083854 . T . PASS END=88083866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr2 88084594 . C . PASS END=88084597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1177:0,89,255:37,0 chr2 88084598 . G . PASS END=88084598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1295:0,72,255:36,0 chr2 88084599 . T . PASS END=88084603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1360:0,111,255:39,0 chr2 88084604 . G . PASS END=88084604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1368:0,68,255:37,0 chr2 88084605 . T . PASS END=88084611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:41:0,117,1613:0,117,255:40,0 chr2 88084612 . A . PASS END=88084612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1532:0,78,255:40,0 chr2 88084613 . G . PASS END=88084688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,106,1751:0,106,255:40,0 chr2 88088241 . C . LowDepth;LowGQ END=88088358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88091509 . C . LowGQ END=88091524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,100:0,0,104:3,0 chr2 88091525 . T . PASS END=88091547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 88091548 . A . PASS END=88091553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,147:3,0 chr2 88091554 . C . LowGQ END=88091592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,0,55:2,0 chr2 88091681 . C . LowDepth;LowGQ END=88091860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88092741 . T . LowDepth;LowGQ END=88092887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88093150 . C . LowDepth;LowGQ END=88093287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88093554 . C . LowDepth;LowGQ END=88093712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88094636 . C . LowDepth;LowGQ END=88094759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88094927 . A . LowDepth;LowGQ END=88095102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88095186 . T . LowDepth;LowGQ END=88095367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88097484 . C . LowDepth;LowGQ END=88097693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88100124 . C . LowDepth;LowGQ END=88100211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88106215 . C . LowDepth;LowGQ END=88106410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88111004 . C . LowDepth;LowGQ END=88111149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88111495 . C . LowDepth;LowGQ END=88111725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88115788 . C . LowDepth;LowGQ END=88115940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88116385 . C . LowDepth;LowGQ END=88116496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 88118078 . T . PASS END=88118142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,131,255:40,0 chr2 88125177 . C . PASS END=88125191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:16,0 chr2 88125192 . G . PASS END=88125192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 88125193 . G . PASS END=88125197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr2 88125198 . G . PASS END=88125205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 88125206 . C . PASS END=88125216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 88125217 . T . PASS END=88125221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 88125222 . C . PASS END=88125224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 88125225 . C . PASS END=88125233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 88125234 . T . PASS END=88125234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:19,0 chr2 88125235 . T . PASS END=88125248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 88280234 . A . PASS END=88280236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 88280237 . A . PASS END=88280237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr2 88280238 . T . PASS END=88280246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr2 88280247 . G . PASS END=88280308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1260:0,87,255:40,0 chr2 88285246 . A . PASS END=88285377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:69:0,120,1800:0,191,255:40,0 chr2 88285378 . C . PASS END=88285414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:83:0,120,1800:0,202,255:40,0 chr2 88285415 . G A, 41.13 PASS DP=82;MQ=44.21;MQRankSum=0.441;ReadPosRankSum=5.886;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,42,0:0.512,0.000:82:22,24,0:18,18,0:40:76,0,43,1443,1399,2842:255,0,255:34,0:4.1125e+01,4.3620e-04,4.6335e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,22,16,26:20,20,22,20 chr2 88285416 . T . PASS END=88285433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,193,255:40,0 chr2 88288628 . C . PASS END=88288640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:9,0 chr2 88288641 . G . PASS END=88288652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 88288653 . A . PASS END=88288653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 88288654 . A . PASS END=88288664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 88288665 . A . PASS END=88288665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 88288666 . A . PASS END=88288672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 88288673 . A . PASS END=88288682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 88288683 . C . PASS END=88288685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 88288686 . T . PASS END=88288688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 88289215 . T . PASS END=88289215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 88289216 . A . PASS END=88289224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:23,0 chr2 88289225 . C . PASS END=88289225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 88289226 . T . PASS END=88289226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 88289227 . G . PASS END=88289244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1103:0,90,255:39,0 chr2 88289245 . G . PASS END=88289330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:40:0,84,1345:0,84,255:40,0 chr2 88289331 . C . PASS END=88289355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:37:0,93,1440:0,93,255:40,0 chr2 88292243 . C . PASS END=88292252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1274:0,89,255:37,0 chr2 88292253 . G . PASS END=88292253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1190:0,78,255:34,0 chr2 88292254 . A . PASS END=88292264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1341:0,81,255:39,0 chr2 88292265 . T . PASS END=88292301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:39:0,94,1396:0,94,255:40,0 chr2 88292302 . A G, 176.49 PASS DP=46;MQ=26.14;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,24,0:0,22,0:135:214,138,0,1750,138,1750:255,138,0:0,0:1.7649e+02,1.3499e+02,0.0000e+00,4.5000e+02,1.6976e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,32:0,0,20,26 chr2 88292303 . A . PASS END=88292326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:37:0,82,1350:0,82,255:39,0 chr2 88292327 . G . PASS END=88292327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:30,0 chr2 88292328 . G . PASS END=88292332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,96,255:31,0 chr2 88327303 . T . PASS END=88327332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:52:0,120,1800:0,123,255:40,0 chr2 88327333 . C . LowGQ END=88327333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,12:71:0:71:0,0,1591:16,0,255:40,0 chr2 88327334 . A . PASS END=88327334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,8:72:68:72:0,68,1939:0,68,255:40,0 chr2 88327335 . T . PASS END=88328041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:40:0,110,1473:0,110,255:40,0 chr2 88328042 . T . PASS END=88328042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1373:0,65,255:35,0 chr2 88328043 . C . PASS END=88328067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1215:0,87,255:38,0 chr2 88328068 . C . PASS END=88328068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:27,0 chr2 88328069 . T . PASS END=88328076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:29,0 chr2 88328077 . C . PASS END=88328077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:26,0 chr2 88328078 . T . PASS END=88328079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 88328080 . C . PASS END=88328082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr2 88367384 . A . PASS END=88367510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:36:0,92,1324:0,92,255:40,0 chr2 88367511 . T . PASS END=88367511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1224:0,69,255:31,0 chr2 88367512 . T . PASS END=88367517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,91,255:33,0 chr2 88367518 . C . PASS END=88367520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:26,0 chr2 88383835 . C . PASS END=88383844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 88383845 . T . PASS END=88383845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr2 88383846 . T . PASS END=88383848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 88383849 . T . PASS END=88383849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 88383850 . G . PASS END=88383874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:18,0 chr2 88383875 . G . PASS END=88383875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 88383876 . A . PASS END=88383880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr2 88383881 . C . PASS END=88383896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 88383897 . A . PASS END=88383897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 88383898 . G . PASS END=88383921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 88383922 . C . PASS END=88383922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 88383923 . C . PASS END=88383972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,876:0,63,255:23,0 chr2 88383973 . C . PASS END=88383973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 88383974 . A . PASS END=88383977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 88383978 . A . PASS END=88384007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 88384008 . T . PASS END=88384011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 88387381 . G . PASS END=88387383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 88387384 . G . PASS END=88387384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 88387385 . G . PASS END=88387395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr2 88387396 . C . PASS END=88387402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,578:0,48,255:18,0 chr2 88387403 . C A, 101.17 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,7,0:0,11,0:51:139,54,0,697,54,697:255,54,0:0,0:1.0117e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,7:0,0,8,10 chr2 88387404 . G . PASS END=88387405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,698:0,54,255:19,0 chr2 88387406 . G . PASS END=88387424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:25,0 chr2 88387425 . G . PASS END=88387440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:33,0 chr2 88387441 . C . PASS END=88387562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1219:0,92,255:40,0 chr2 88387563 . G . PASS END=88387581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,990:0,81,255:26,0 chr2 88387582 . C . PASS END=88387594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:20:0,54,810:0,60,255:19,0 chr2 88390531 . A . PASS END=88390538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 88390539 . C . PASS END=88390539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 88390540 . A . PASS END=88390540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 88390541 . A . PASS END=88390541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 88390542 . C . PASS END=88390543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 88390544 . G . PASS END=88390544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 88390545 . T . PASS END=88390562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:34,0 chr2 88390563 . G . PASS END=88390563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1211:0,74,255:32,0 chr2 88390564 . A . PASS END=88390565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr2 88390566 . A . PASS END=88390566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1111:0,72,255:32,0 chr2 88390567 . G . PASS END=88390634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1211:0,86,255:37,0 chr2 88390635 . C . PASS END=88390650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,74,255:25,0 chr2 88390651 . A . PASS END=88390651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 88390652 . A . PASS END=88390657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 88390658 . G . PASS END=88390658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 88390659 . C . PASS END=88390661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 88393036 . T . PASS END=88393074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,138,255:40,0 chr2 88396114 . A . PASS END=88396114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:16,0 chr2 88396115 . A . PASS END=88396132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,576:0,51,255:19,0 chr2 88396133 . G . PASS END=88396136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:20,0 chr2 88396137 . A . PASS END=88396137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 88396138 . G . PASS END=88396151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,664:0,60,255:25,0 chr2 88396152 . A . PASS END=88396152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 88396153 . G . PASS END=88396154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 88396155 . A . PASS END=88396155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 88396156 . G . PASS END=88396158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 88396159 . G . PASS END=88396303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:28:0,81,1215:0,84,255:40,0 chr2 88402577 . C . PASS END=88402669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,131,255:40,0 chr2 88405844 . G . PASS END=88406004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:37:0,81,1215:0,90,255:40,0 chr2 88406005 . T . PASS END=88406007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,92,255:26,0 chr2 88407890 . G . PASS END=88407890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 88407891 . A . PASS END=88407896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,962:0,81,255:35,0 chr2 88407897 . T . PASS END=88407897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:34,0 chr2 88407898 . A . PASS END=88407921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:35:0,98,1327:0,98,255:38,0 chr2 88407922 . G . PASS END=88407958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,111,1665:0,117,255:40,0 chr2 88407959 . T C, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.227;ReadPosRankSum=1.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,28,0:0.528,0.000:53:10,13,0:15,15,0:48:85,0,50,915,886,1801:255,0,255:24,0:5.0000e+01,6.6010e-05,5.2826e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,15,19,9:15,10,14,14 chr2 88407960 . G . PASS END=88407996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,159,255:40,0 chr2 88407997 . A . PASS END=88408046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:35:0,93,1395:0,105,255:40,0 chr2 88408047 . A . PASS END=88408058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr2 88409873 . G . PASS END=88409989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:38:0,93,1395:0,94,255:40,0 chr2 88409990 . A . PASS END=88409992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:32,0 chr2 88409993 . A . PASS END=88410000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1260:0,96,255:31,0 chr2 88410001 . A . PASS END=88410016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,81,255:26,0 chr2 88410017 . C . PASS END=88410031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:19,0 chr2 88411621 . G . PASS END=88411638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,206,255:40,0 chr2 88422573 . T . PASS END=88422623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:51:0,120,1800:0,137,255:40,0 chr2 88423971 . T . PASS END=88424028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,183,255:40,0 chr2 88424029 . C . PASS END=88424065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:85:0,120,1800:0,231,255:40,0 chr2 88424066 . T C, 49.69 PASS DP=86;MQ=250.00;MQRankSum=7.920;ReadPosRankSum=5.983;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,40,0:0.471,0.000:85:29,20,0:16,20,0:48:84,0,50,1402,1602,3004:255,0,255:40,0:4.9686e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,28,20,20:23,22,16,24 chr2 88424067 . T . PASS END=88424103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,162,255:40,0 chr2 88424104 . G . PASS END=88424105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:64:0,120,1800:0,179,255:40,0 chr2 88425695 . C . PASS END=88425697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,828:0,75,255:26,0 chr2 88425698 . G . PASS END=88425707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 88425708 . C . PASS END=88425711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:25,0 chr2 88425712 . T . PASS END=88425712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:23,0 chr2 88425713 . C . PASS END=88425718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 88425719 . C . PASS END=88425733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1108:0,87,255:31,0 chr2 88425734 . C . PASS END=88425734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 88425735 . T . PASS END=88425743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1125:0,93,255:32,0 chr2 88425744 . G . PASS END=88425744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:27:32:0,27,1094:0,27,255:30,0 chr2 88425745 . T . PASS END=88425808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1103:0,82,255:36,0 chr2 88425809 . C . PASS END=88425815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 88425816 . T . PASS END=88425819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 88425820 . A . PASS END=88425832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,68,255:26,0 chr2 88425833 . A . PASS END=88425833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:19,0 chr2 88425834 . T . PASS END=88425836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,62,255:21,0 chr2 88425837 . T . PASS END=88425837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 88425838 . T . PASS END=88425843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 88425844 . T . PASS END=88425844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr2 88425845 . C . PASS END=88425850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 88425851 . G . PASS END=88425851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 88425852 . A . PASS END=88425856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 88425857 . T . PASS END=88425867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,706:0,46,255:19,0 chr2 88427470 . C . PASS END=88427536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,122,255:40,0 chr2 88470823 . A . PASS END=88470826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,113,1521:0,113,255:40,0 chr2 88472670 . A . PASS END=88472678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:19,0 chr2 88472679 . G . PASS END=88472690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:24,0 chr2 88472691 . G . PASS END=88472694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:30,0 chr2 88472695 . T . PASS END=88472695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 88472696 . A . PASS END=88472742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1080:0,90,255:33,0 chr2 88472743 . C . PASS END=88472744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 88472745 . G . PASS END=88472750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 88472751 . G . PASS END=88472753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 88472754 . C . PASS END=88472756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr2 88472757 . T . PASS END=88472758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 88472759 . T . PASS END=88472786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,71,255:26,0 chr2 88472787 . A . PASS END=88472787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:22,0 chr2 88472788 . G . PASS END=88472788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:22,0 chr2 88472789 . A . PASS END=88472789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:22,0 chr2 88472790 . G . PASS END=88472790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 88472791 . G A, 119.22 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,15,0:0,9,0:69:157,72,0,900,72,900:255,72,0:0,0:1.1922e+02,6.9222e+01,5.1772e-07,4.5000e+02,1.0399e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,15:0,0,14,10 chr2 88472792 . G . PASS END=88472796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 88472797 . T . PASS END=88472797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 88472798 . G . PASS END=88472809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 88472810 . C . PASS END=88472810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 88472811 . A . PASS END=88472812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 88472813 . A . PASS END=88472828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 88472829 . C . PASS END=88472829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 88472830 . T . PASS END=88472858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,590:0,40,255:19,0 chr2 88472859 . G . PASS END=88472892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 88474158 . A . PASS END=88474332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,99,1382:0,99,255:40,0 chr2 88474333 . G . PASS END=88474341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,98,255:34,0 chr2 88474342 . T . PASS END=88474352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:28:0,72,1080:0,84,255:25,0 chr2 88474768 . G . PASS END=88474770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 88474771 . C . PASS END=88474898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,986:0,81,255:40,0 chr2 88474899 . C . PASS END=88474899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr2 88474900 . A . PASS END=88474917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:31,0 chr2 88474918 . G . PASS END=88474920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 88478302 . T . PASS END=88478461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1194:0,90,255:38,0 chr2 88478462 . A . PASS END=88478462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 88478463 . T . PASS END=88478472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 88478473 . C . PASS END=88478493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr2 88478494 . A . PASS END=88478502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 88478503 . T . PASS END=88478519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,887:0,67,255:26,0 chr2 88478520 . G . PASS END=88478532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr2 88482218 . C . PASS END=88482219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 88482220 . G . PASS END=88482317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:31:0,89,1247:0,89,255:40,0 chr2 88482318 . T . PASS END=88482318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1337:0,79,255:37,0 chr2 88482319 . C . PASS END=88482342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1273:0,100,255:40,0 chr2 88482343 . T . PASS END=88482343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:36,0 chr2 88482344 . T . PASS END=88482366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1260:0,89,255:37,0 chr2 88482467 . G . PASS END=88482592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:37:0,111,1366:0,111,255:40,0 chr2 88484847 . C . PASS END=88484847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 88484848 . T . PASS END=88484848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 88484849 . T . PASS END=88484849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 88484850 . T . PASS END=88484851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,864:0,47,255:23,0 chr2 88484852 . A . PASS END=88484859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr2 88484860 . T . PASS END=88484864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1102:0,84,255:29,0 chr2 88484865 . T . PASS END=88484865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 88484866 . C . PASS END=88484868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 88484869 . T . PASS END=88484869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 88484870 . G . PASS END=88484871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 88484872 . C . PASS END=88484873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:28,0 chr2 88484874 . G . PASS END=88484874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 88484875 . T . PASS END=88484876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 88484877 . T . PASS END=88484878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 88484879 . G . PASS END=88484879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 88484880 . G . PASS END=88484880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 88484881 . A . PASS END=88484881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 88484882 . T . PASS END=88484883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 88484884 . A . PASS END=88484884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr2 88484885 . A . PASS END=88484887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 88484888 . C . PASS END=88484888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 88484889 . A . PASS END=88484889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 88484890 . T . PASS END=88484891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 88484892 . A . PASS END=88484902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1127:0,96,255:34,0 chr2 88484903 . G . PASS END=88484903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:33,0 chr2 88484904 . G . PASS END=88484994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:34:0,81,1296:0,81,255:38,0 chr2 88484995 . C . PASS END=88484997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 88484998 . G . PASS END=88484998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 88485047 . G . PASS END=88485165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:36:0,85,1288:0,85,255:40,1 chr2 88485166 . G . PASS END=88485166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1259:0,67,255:28,0 chr2 88485167 . T . PASS END=88485174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1195:0,88,255:31,0 chr2 88485175 . A . PASS END=88485175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 88485176 . T . PASS END=88485179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr2 88485180 . A . PASS END=88485180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:28,0 chr2 88485181 . G . PASS END=88485181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 88485182 . G . PASS END=88485182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr2 88485183 . G . PASS END=88485185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 88485186 . A . PASS END=88485186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 88485187 . G . PASS END=88485188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 88485189 . C . PASS END=88485190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 88485191 . T . PASS END=88485191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr2 88485192 . G . PASS END=88485210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:26:0,63,945:0,65,255:26,0 chr2 88485417 . C . PASS END=88485424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:25,0 chr2 88485425 . G . PASS END=88485426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,856:0,42,255:25,0 chr2 88485427 . T . PASS END=88485429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr2 88485430 . T . PASS END=88485430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 88485431 . G . PASS END=88485432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:25,0 chr2 88485433 . C . PASS END=88485434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr2 88485435 . C . PASS END=88485435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 88485436 . G . PASS END=88485438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr2 88485439 . C . PASS END=88485439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 88485440 . C . PASS END=88485440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:25,0 chr2 88485441 . T . PASS END=88485443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 88485444 . C . PASS END=88485446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr2 88485447 . T . PASS END=88485447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 88485448 . G . PASS END=88485448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 88485449 . C . PASS END=88485450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 88485451 . G . PASS END=88485451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:27,0 chr2 88485452 . C . PASS END=88485455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:28,0 chr2 88485456 . G . PASS END=88485456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 88485457 . T . PASS END=88485458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 88485459 . C . PASS END=88485461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 88485462 . G . PASS END=88485462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:27,0 chr2 88485463 . G . PASS END=88485466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 88485467 . C . PASS END=88485467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr2 88485468 . T . PASS END=88485470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 88485471 . C . PASS END=88485474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:24,0 chr2 88485475 . G . PASS END=88485475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:24,0 chr2 88485476 . C . PASS END=88485476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 88485477 . T . PASS END=88485477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 88485478 . G . PASS END=88485485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1062:0,74,255:26,0 chr2 88485486 . G . PASS END=88485491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 88485492 . T . PASS END=88485492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,856:0,26,255:27,0 chr2 88485493 . G . PASS END=88485493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 88485494 . A . PASS END=88485496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:30:0,65,1036:0,65,255:29,0 chr2 88485497 . C . PASS END=88485517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1202:0,86,255:34,0 chr2 88485518 . T . PASS END=88485518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr2 88485519 . G . PASS END=88485629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1252:0,102,255:40,0 chr2 88485630 . C . PASS END=88485642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr2 88747726 . C . PASS END=88747731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 88747732 . C . PASS END=88747733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,778:0,53,255:22,0 chr2 88747734 . C . PASS END=88747742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,833:0,69,255:24,0 chr2 88747743 . C . PASS END=88747743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 88747744 . T . PASS END=88747744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 88747745 . C . PASS END=88747748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 88747749 . G . PASS END=88747749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:27,0 chr2 88747750 . G . PASS END=88747751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 88747752 . A . PASS END=88747752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 88747753 . G . PASS END=88747764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1050:0,80,255:31,0 chr2 88747765 . C . PASS END=88747765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 88747766 . A . PASS END=88747919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1125:0,87,255:40,0 chr2 88747920 . A . PASS END=88747920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:30,0 chr2 88747921 . G . PASS END=88747968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:33,0 chr2 88747969 . T . PASS END=88747969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:28,0 chr2 88747970 . A . PASS END=88747978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 88747979 . C . PASS END=88747979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 88747980 . T . PASS END=88747983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 88747984 . A . PASS END=88747988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 88747989 . G . PASS END=88747989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr2 88747990 . A . PASS END=88747997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,953:0,75,255:26,0 chr2 88747998 . G . PASS END=88748010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:29,0 chr2 88748011 . G . PASS END=88748013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 88748014 . G . PASS END=88748015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 88748016 . T . PASS END=88748018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 88748019 . C . PASS END=88748027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 88748028 . A . PASS END=88748030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:49:29:0,49,1031:0,49,255:28,0 chr2 88748031 . T . PASS END=88748046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 88748047 . A . PASS END=88748048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 88748049 . T . PASS END=88748050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 88748051 . T . PASS END=88748072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,71,255:26,0 chr2 88748073 . G . PASS END=88748085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:21:0,42,765:0,42,255:19,0 chr2 88748086 . A . PASS END=88748086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:17,0 chr2 88748087 . G . PASS END=88748089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 88748090 . G . PASS END=88748097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 88748098 . A . PASS END=88748098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 88748099 . G . PASS END=88748102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 88748103 . T . PASS END=88748103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 88748104 . C . PASS END=88748183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,914:0,66,255:26,0 chr2 88748184 . C . PASS END=88748188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:28,0 chr2 88748189 . G . PASS END=88748189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 88748190 . A . PASS END=88748193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 88748194 . C . PASS END=88748195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr2 88748196 . A . PASS END=88748197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 88748198 . C . PASS END=88748275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,915:0,62,255:26,0 chr2 88748276 . C . PASS END=88748276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 88748277 . G . PASS END=88748287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,764:0,66,255:22,0 chr2 88748288 . A . PASS END=88748288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 88748289 . A . PASS END=88748295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 88748296 . A . PASS END=88748296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 88748297 . T . PASS END=88748297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 88748298 . T . PASS END=88748298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 88748299 . G . PASS END=88748306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 88748307 . T . PASS END=88748310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr2 88748311 . C . PASS END=88748319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 88748320 . C . PASS END=88748320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 88748321 . G . PASS END=88748321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,682:0,24,255:18,0 chr2 88748322 . G . PASS END=88748348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 88751415 . C . PASS END=88751416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 88751417 . G . PASS END=88751417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 88751418 . G . PASS END=88751418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 88751419 . G . PASS END=88751419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 88751420 . T . PASS END=88751482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:30:0,80,1133:0,80,255:40,0 chr2 88751483 . T . PASS END=88751483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1424:0,74,255:37,0 chr2 88751484 . T . PASS END=88751523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:35:0,88,1219:0,88,255:40,0 chr2 88751524 . A . PASS END=88751524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr2 88751525 . T . PASS END=88751557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1161:0,80,255:32,0 chr2 88751558 . A . PASS END=88751559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 88751560 . T . PASS END=88751561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:27,0 chr2 88751562 . T . PASS END=88751580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:23,0 chr2 88751581 . A . PASS END=88751586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 88751587 . C . PASS END=88751587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:17,0 chr2 88751588 . A . PASS END=88751606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr2 88751607 . A . PASS END=88751612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:17:0,37,566:0,37,255:13,0 chr2 88751613 . A . PASS END=88751613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,510:0,18,255:11,0 chr2 88751614 . G . PASS END=88751617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,535:0,31,255:14,0 chr2 88751618 . G . PASS END=88751621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 88751622 . G . PASS END=88751622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr2 88751623 . C . PASS END=88751623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 88751624 . A . PASS END=88751627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 88751628 . T . PASS END=88751628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,366:0,25,255:9,0 chr2 88751629 . C . PASS END=88751637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,313:0,30,255:10,0 chr2 88751638 . G . PASS END=88751638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 88751639 . T . PASS END=88751639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr2 88751640 . C . PASS END=88751645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 88751646 . G . PASS END=88751646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 88751647 . G . PASS END=88751647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 88751648 . C . PASS END=88751682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:10:4:0,10,147:0,10,147:8,0 chr2 88751683 . C . PASS END=88751708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,70:0,6,70:2,0 chr2 88751709 . C . LowGQ END=88751750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:0,0 chr2 88751751 . A AG, 57.00 PASS DP=3;MQ=242.58;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,2,0:0,1,0:7:88,9,0,111,9,111:116,9,0:0,6:5.6996e+01,6.9962e+00,9.6785e-01,1.1500e+02,4.1766e+01,1.1800e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,0,3:0,0,1,2 chr2 88751752 . G . LowGQ END=88751794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,3:3:0:2:0,0,0:0,6,0:3,0 chr2 88751795 . C . LowDepth;LowGQ END=88751998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 88751999 . G . PASS END=88752053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr2 88825163 . A . PASS END=88825189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,117,1800:0,117,255:40,0 chr2 88825923 . G . PASS END=88826015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:42:0,120,1800:0,126,255:40,0 chr2 88828570 . C . PASS END=88828571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:22,0 chr2 88828572 . G . PASS END=88828582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:24,0 chr2 88828583 . A . PASS END=88828589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 88828590 . A . PASS END=88828590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,915:0,67,255:27,0 chr2 88828591 . C . PASS END=88828594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr2 88828595 . G . PASS END=88828595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 88828596 . G . PASS END=88828604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr2 88828605 . G . PASS END=88828605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 88828606 . T . PASS END=88828609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 88828610 . A . PASS END=88828614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,1015:0,60,255:26,0 chr2 88828615 . C . PASS END=88828616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 88828617 . C . PASS END=88828617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 88828618 . A . PASS END=88828618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 88828619 . T . PASS END=88828619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 88828620 . C . PASS END=88828620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 88828621 . C . PASS END=88828641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:26,0 chr2 88828642 . A . PASS END=88828789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1177:0,86,255:37,0 chr2 88828790 . A . PASS END=88828792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 88828793 . A . PASS END=88828930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1215:0,84,255:40,0 chr2 88828931 . G . PASS END=88828941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,990:0,65,255:25,0 chr2 88828942 . A . PASS END=88828943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,779:0,36,255:20,0 chr2 88828944 . G . PASS END=88828947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 88828948 . C . PASS END=88828956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:16,0 chr2 88828957 . A . PASS END=88828964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr2 88828965 . G . PASS END=88828969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 88828970 . C . PASS END=88828992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 88856352 . G . PASS END=88856352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 88856378 . A . PASS END=88856378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:51:0,120,1744:0,120,255:40,0 chr2 88856542 . G . PASS END=88856542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 88856619 . C . PASS END=88856619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 88856795 . C . PASS END=88856795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 88856846 . A . PASS END=88856846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 88856889 . C . PASS END=88856889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 88856894 . G . PASS END=88856894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 88856898 . T . PASS END=88856898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 88856914 . T . PASS END=88856914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 88856942 . C . PASS END=88856942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 88856968 . C . PASS END=88856968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1496:0,96,255:40,0 chr2 88856983 . A . PASS END=88856983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 88857079 . T . PASS END=88857079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 88857150 . T . PASS END=88857150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 88857155 . G . PASS END=88857155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 88857254 . C . PASS END=88857440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:35:0,84,1260:0,97,255:40,0 chr2 88857441 . T . PASS END=88857454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,80,255:25,0 chr2 88858435 . C . PASS END=88858497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:74:0,120,1800:0,167,255:40,0 chr2 88861807 . C . PASS END=88861908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:42:0,90,1430:0,90,255:40,0 chr2 88870391 . C . PASS END=88870543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:33:0,84,1260:0,99,255:40,0 chr2 88870544 . A . PASS END=88870559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,73,255:25,0 chr2 88874184 . C . PASS END=88874190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:25,0 chr2 88874191 . T . PASS END=88874191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 88874192 . C . PASS END=88874195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 88874196 . G . PASS END=88874853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:27:0,81,972:0,81,255:40,0 chr2 88874854 . G . PASS END=88874890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:61:0,120,1800:0,156,255:40,0 chr2 88874891 . C A, 235.22 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,34,0:0,29,0:185:273,188,0,2331,188,2331:255,189,0:0,0:2.3522e+02,1.8522e+02,0.0000e+00,4.5000e+02,2.1999e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,46:0,0,30,33 chr2 88874892 . G . PASS END=88874928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,137,255:40,0 chr2 88874929 . T . PASS END=88874960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:38:0,96,1440:0,114,255:40,0 chr2 88874961 . T . PASS END=88874964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:25,0 chr2 88876072 . C . PASS END=88876072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 88876073 . T . PASS END=88876078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,903:0,67,255:26,0 chr2 88876079 . C . PASS END=88876087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 88876088 . A . PASS END=88876088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:27,0 chr2 88876089 . A . PASS END=88876099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1064:0,84,255:29,0 chr2 88876100 . T . PASS END=88876100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 88876101 . C . PASS END=88876102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 88876103 . T . PASS END=88876103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 88876104 . T . PASS END=88876191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1047:0,84,255:36,0 chr2 88876192 . T . PASS END=88876196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,85,255:26,0 chr2 88876197 . C . PASS END=88876198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 88876199 . T . PASS END=88876221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr2 88879036 . C . PASS END=88879093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:74:0,120,1800:0,199,255:40,0 chr2 88879094 . C . PASS END=88879130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:72:0,120,1800:0,183,255:40,0 chr2 88879131 . T C, 50.00 PASS DP=72;MQ=250.00;MQRankSum=7.292;ReadPosRankSum=2.427;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,36,0:0.500,0.000:72:19,19,0:17,17,0:48:85,0,50,1278,1222,2500:255,0,255:29,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,23,21,15:24,12,20,16 chr2 88879132 . T . PASS END=88879158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,129,255:40,0 chr2 88882948 . C . PASS END=88882979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,162,255:40,0 chr2 88882980 . C . PASS END=88883060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:59:0,120,1800:0,161,255:40,0 chr2 88885358 . C . PASS END=88885562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:81:34:0,81,1215:0,102,255:40,0 chr2 88885563 . T . PASS END=88885578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:24:0,63,945:0,71,255:25,0 chr2 88885579 . T . PASS END=88885579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:19,0 chr2 88887500 . C . PASS END=88887622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,120,1800:0,127,255:40,0 chr2 88888279 . G . PASS END=88888419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,108,1620:0,144,255:40,0 chr2 88889951 . A . PASS END=88889951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 88889961 . C . PASS END=88890113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:35:0,81,1215:0,87,255:40,0 chr2 88890114 . G . PASS END=88890114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 88890115 . A . PASS END=88890123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,83,255:28,0 chr2 88890336 . C . PASS END=88890342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 88890343 . T . PASS END=88890570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,1039:0,81,255:40,0 chr2 88892790 . T . PASS END=88892919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:81:43:0,81,1215:0,98,255:40,1 chr2 88892920 . T . PASS END=88892922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr2 88892923 . C . PASS END=88892923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 88893582 . T . PASS END=88893600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,631:0,54,255:19,0 chr2 88893601 . G . PASS END=88893601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 88893602 . G . PASS END=88893602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 88893603 . T . PASS END=88893608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 88893609 . G . PASS END=88893609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 88893610 . A . PASS END=88893626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,892:0,66,255:23,0 chr2 88894987 . C . PASS END=88895085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:47:0,120,1800:0,141,255:40,0 chr2 88895086 . A . PASS END=88895122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:72:0,120,1800:0,189,255:40,0 chr2 88895123 . T C, 262.78 PASS DP=72;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,30,0:0,42,0:213:301,216,0,2725,216,2725:255,216,0:0,0:2.6278e+02,2.1278e+02,0.0000e+00,4.5000e+02,2.4755e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,39:0,0,41,31 chr2 88895124 . G . PASS END=88895160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:37:0,96,1440:0,110,255:40,0 chr2 88895161 . G . PASS END=88895181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,88,255:32,0 chr2 88913242 . C . PASS END=88913369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1145:0,80,255:40,0 chr2 88913370 . A . PASS END=88913370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr2 88913371 . C . PASS END=88913371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 88926485 . C . PASS END=88926498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,217:6,0 chr2 88926499 . C . PASS END=88926540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 88926541 . C . PASS END=88926565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 88926566 . T . PASS END=88926570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,217:3,0 chr2 88926571 . G . PASS END=88926621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr2 88926622 . C . PASS END=88926682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr2 88926683 . G . PASS END=88926728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:3:0,3,45:0,9,94:3,0 chr2 88926729 . CCAGCAG CCAG,C, 28.04 PASS DP=8;MQ=249.01;MQRankSum=1.221;ReadPosRankSum=0.684;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,4,1,0:0.500,0.125,0.000:8:1,0,0,0:2,4,1,0:28:39,0,49,40,65,90,42,70,117,112:170,0,92:3,7:2.8045e+01,7.3171e-03,5.2423e+01,3.9634e+01,7.5519e+01,9.2634e+01,6.5687e+01,1.0444e+02,1.5215e+02,1.3835e+02:0.00,11.00,14.00,11.00,22.00,14.00,34.77,45.77,45.77,37.77:2,1,4,1:2,1,1,4 chr2 88926730 . C . LowGQ END=88926736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,6:9:0:8:0,0,0:15,0,86:8,7 chr2 88926737 . A . PASS END=88926744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 88926745 . C . PASS END=88926781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 88926782 . G . PASS END=88926784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 88926785 . C . PASS END=88926792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 88926802 . G . PASS END=88926802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 88926954 . C . PASS END=88926954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 88926987 . C . PASS END=88926987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 88926993 . T . PASS END=88926993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 88927055 . A . PASS END=88927055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 88991217 . A . PASS END=88991225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:6,0 chr2 88991226 . C . PASS END=88991235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:20:7:0,20,249:0,20,249:11,0 chr2 88991236 . T . PASS END=88991236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 88991237 . C . PASS END=88991238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 88991239 . G . PASS END=88991240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 88991241 . A . PASS END=88991241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 88991242 . C . PASS END=88991243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 88991244 . C . PASS END=88991252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 88991253 . C . PASS END=88991253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr2 88991254 . G . PASS END=88991266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,546:0,45,255:18,0 chr2 88991267 . G . PASS END=88991267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 88991268 . C . PASS END=88991285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,714:0,54,255:19,0 chr2 88991286 . G . PASS END=88991317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 88991318 . G . PASS END=88991318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 88991319 . G . PASS END=88991328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 88991329 . G . PASS END=88991329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 88991330 . T . PASS END=88991355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr2 88991356 . C . PASS END=88991374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,53,255:18,0 chr2 88991375 . C . PASS END=88991375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 88991376 . G . PASS END=88991400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 88991401 . G . PASS END=88991401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 88991402 . C . PASS END=88991403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 88991404 . G . PASS END=88991410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 88991411 . C . PASS END=88991412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 88991413 . A . PASS END=88991424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 88991425 . C . PASS END=88991427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 88991428 . C . PASS END=88991428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 88991429 . C . PASS END=88991429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 88991430 . C . PASS END=88991438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 88991439 . A . PASS END=88991440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 88991441 . G . PASS END=88991443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 88991444 . C . PASS END=88991451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:10:0,22,405:0,22,255:9,0 chr2 88991452 . A . PASS END=88991452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 88991453 . G . PASS END=88991463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 88991464 . A . PASS END=88991464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 88991465 . G . PASS END=88991474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr2 88991475 . C . PASS END=88991475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 88991476 . G . PASS END=88991478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 88991479 . C . PASS END=88991500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,241:6,0 chr2 88991501 . G . PASS END=88991501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 88998002 . A . PASS END=88998062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,103,1622:0,103,255:40,0 chr2 88999526 . G . PASS END=88999582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,120,1800:0,140,255:40,0 chr2 89028796 . G . PASS END=89028855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1312:0,80,255:37,0 chr2 89034069 . A . PASS END=89034133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,116,1800:0,116,255:40,1 chr2 89034144 . T . PASS END=89034144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 89035186 . A . PASS END=89035254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,116,1604:0,116,255:40,0 chr2 89035257 . A . PASS END=89035257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 89035259 . A . PASS END=89035259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 89036052 . G . PASS END=89036060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,993:0,87,255:29,0 chr2 89036061 . G . PASS END=89036061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 89036062 . A . PASS END=89036193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:83:29:0,83,1208:0,83,255:40,0 chr2 89036208 . T . PASS END=89036208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 89037494 . G . PASS END=89037593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:71:0,120,1800:0,191,255:40,0 chr2 89049498 . G . PASS END=89049595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,110,1800:0,110,255:40,0 chr2 89049610 . G . PASS END=89049610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:69:0,120,1800:0,160,255:40,0 chr2 89049729 . A . PASS END=89049729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr2 89049851 . C . PASS END=89049851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:89:0,120,1800:0,220,255:40,0 chr2 89049874 . C . LowGQ END=89049874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,24:87:0:87:0,0,1454:255,0,255:40,31 chr2 89049876 . A . LowGQ END=89049876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,9:87:0:87:0,0,2516:65,0,255:40,0 chr2 89050153 . G . PASS END=89050153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 89050186 . G . PASS END=89050186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 89050230 . A . PASS END=89050230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 89050307 . T . PASS END=89050307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:93:0,120,1800:0,255,255:40,0 chr2 89050323 . T . PASS END=89050323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr2 89050378 . A . PASS END=89050378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr2 89050402 . C . PASS END=89050402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 89156874 . C . PASS END=89156875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 89156876 . A . PASS END=89156883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 89156884 . C . PASS END=89156887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 89156888 . T . PASS END=89156888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 89156889 . G . PASS END=89156897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 89156898 . C . PASS END=89156898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 89156899 . T . PASS END=89156902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1070:0,87,255:30,0 chr2 89156903 . T . PASS END=89156903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 89156904 . G . PASS END=89156904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 89156905 . A . PASS END=89156905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 89156906 . C . PASS END=89156910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1125:0,90,255:33,0 chr2 89156911 . G . PASS END=89156947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1241:0,81,255:37,0 chr2 89156948 . C G, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.182;ReadPosRankSum=3.738;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,24,0:0.615,0.000:39:8,14,0:7,10,0:46:85,0,46,820,530,1357:255,0,255:15,0:5.0000e+01,1.0329e-04,4.8612e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,14,10:8,7,12,12 chr2 89156949 . T . PASS END=89156985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1350:0,95,255:36,0 chr2 89156986 . G . PASS END=89157193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:35:0,90,1350:0,99,255:40,0 chr2 89157194 . T . PASS END=89157194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1181:0,74,255:29,0 chr2 89157195 . T . PASS END=89157196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:29,0 chr2 89160080 . G . PASS END=89160117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:77:0,120,1800:0,185,255:40,0 chr2 89160398 . G . PASS END=89160434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,3:70:99:62:0,120,1800:0,130,255:40,0 chr2 89160733 . G . PASS END=89160769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:71:0,108,1800:0,108,255:40,0 chr2 89160770 . T . PASS END=89160770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,5:72:45:72:0,45,2343:0,45,255:40,0 chr2 89161037 . G . PASS END=89161068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:152,2:154:99:147:0,120,1800:0,255,255:40,0 chr2 89161073 . A . PASS END=89161075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:138,3:141:99:137:0,120,1800:0,218,255:40,0 chr2 89161398 . G . PASS END=89161435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:163,0:163:99:157:0,120,1800:0,206,255:40,1 chr2 89185088 . A . PASS END=89185136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:93:0,120,1800:0,243,255:40,0 chr2 89185356 . G . PASS END=89185625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:80:33:0,80,1219:0,80,255:40,2 chr2 89185626 . A . PASS END=89185628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 89185629 . A . PASS END=89185632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 89185633 . G . PASS END=89185654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,853:0,64,255:26,0 chr2 89185655 . T . PASS END=89185660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:18,0 chr2 89185661 . A . PASS END=89185661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:17,0 chr2 89185662 . G . PASS END=89185669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,60,255:18,0 chr2 89196811 . A . PASS END=89196859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,154,255:40,0 chr2 89197005 . A . PASS END=89197152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:144,1:145:99:83:0,120,1800:0,135,255:40,0 chr2 89197153 . C . PASS END=89197189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:160,0:160:99:152:0,120,1800:0,255,255:40,0 chr2 89197190 . C T, 509.56 PASS DP=155;MQ=250.00;FractionInformativeReads=0.994 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,154,0:1.000,0.000:154:0,90,0:0,64,0:446:547,463,0,5864,463,5864:255,255,0:0,0:4.5000e+02,4.5000e+02,0.0000e+00,4.4853e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,76,78:0,0,74,80 chr2 89197191 . C . PASS END=89197227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:155,0:155:99:148:0,120,1800:0,255,255:40,0 chr2 89197228 . T . PASS END=89197300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:132,0:132:99:103:0,120,1800:0,255,255:40,0 chr2 89246819 . A . PASS END=89246821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,585:0,48,255:18,0 chr2 89246822 . A . PASS END=89246825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,568:0,18,255:18,0 chr2 89246826 . C . PASS END=89246828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:21,0 chr2 89246829 . T . PASS END=89246829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,720:0,11,255:20,0 chr2 89246830 . T . PASS END=89246832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:21,0 chr2 89246833 . A . PASS END=89246834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:22,0 chr2 89246835 . T . PASS END=89246863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,764:0,66,255:24,0 chr2 89246864 . A . PASS END=89246864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 89246865 . G . PASS END=89246913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr2 89246914 . C . PASS END=89246917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 89246918 . G . PASS END=89246918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 89246919 . A . PASS END=89246942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:21,0 chr2 89246943 . A . PASS END=89246950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 89246951 . C T, 50.00 PASS DP=21;MQ=189.84;MQRankSum=-0.181;ReadPosRankSum=1.340;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,13,0:0.619,0.000:21:4,6,0:4,7,0:47:85,0,47,457,278,735:255,0,231:6,0:5.0000e+01,8.3095e-05,5.0391e+01,4.5000e+02,3.1292e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,5,8:6,2,6,7 chr2 89246952 . G . PASS END=89246988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr2 89246989 . T . PASS END=89247008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 89247009 . C . PASS END=89247011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 89247012 . C . PASS END=89247012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 89247013 . T . PASS END=89247051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr2 89247052 . T . PASS END=89247075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,311:0,27,255:9,0 chr2 89247076 . T . PASS END=89247086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:7:0,18,270:0,21,255:6,0 chr2 89247087 . T . PASS END=89247087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 89247088 . G . PASS END=89247101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,127:0,15,127:6,0 chr2 89247102 . T . PASS END=89247107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 89247108 . T . PASS END=89247114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 89278030 . T . PASS END=89278055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,612:0,45,255:18,0 chr2 89278056 . A . PASS END=89278058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 89278059 . G . PASS END=89278059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr2 89278060 . A . PASS END=89278065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:23,0 chr2 89278066 . G . PASS END=89278066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 89278067 . T . PASS END=89278102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:27:0,81,1039:0,81,255:40,0 chr2 89278103 . T C, 43.48 PASS DP=47;MQ=110.93;MQRankSum=-2.309;ReadPosRankSum=5.279;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,19,0:0.404,0.000:47:14,10,0:14,9,0:43:78,0,49,680,949,1629:255,0,255:28,0:4.3482e+01,2.2495e-04,5.1550e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,15,4:10,18,8,11 chr2 89278104 . A . PASS END=89278140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,105,1723:0,105,255:40,0 chr2 89278141 . G . PASS END=89278285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,108,1620:0,135,255:40,0 chr2 89278455 . C . PASS END=89278488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:110:0,120,1800:0,255,255:40,0 chr2 89278489 . A C, 45.20 PASS DP=111;MQ=78.77;MQRankSum=-5.260;ReadPosRankSum=6.327;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,61,0:0.550,0.000:111:20,26,0:30,35,0:44:80,0,46,2108,1787,3895:255,0,255:40,0:4.5200e+01,1.8768e-04,4.8858e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,29,22,39:21,29,31,30 chr2 89278490 . G . PASS END=89278503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:104:0,120,1800:0,255,255:40,0 chr2 89292089 . T . PASS END=89292144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1050:0,80,255:31,0 chr2 89292145 . C . PASS END=89292156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 89292157 . A . PASS END=89292157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 89292158 . C . PASS END=89292158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 89292159 . T . PASS END=89292181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,901:0,64,255:26,0 chr2 89292182 . A G, 49.75 PASS DP=26;MQ=173.73;MQRankSum=-3.077;ReadPosRankSum=1.846;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:6,8,0:7,5,0:48:85,0,50,462,420,882:255,0,255:13,0:4.9750e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,6,7:8,5,9,4 chr2 89292183 . T . PASS END=89292188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 89292189 . T . PASS END=89292189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:23,0 chr2 89292190 . G . PASS END=89292195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:23,0 chr2 89292196 . T . PASS END=89292196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 89292197 . G . PASS END=89292198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 89292199 . G . PASS END=89292199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 89292200 . T . PASS END=89292200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 89292201 . C T, 49.91 PASS DP=23;MQ=179.29;MQRankSum=-2.554;ReadPosRankSum=1.385;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:5,7,0:7,4,0:48:85,0,50,385,429,815:255,0,255:11,0:4.9906e+01,6.6010e-05,5.3000e+01,3.8531e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,5,6,5:8,4,6,5 chr2 89292202 . A . PASS END=89292202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 89292203 . T . PASS END=89292223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,49,255:17,0 chr2 89326668 . A . PASS END=89326668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 89326669 . G . PASS END=89326669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 89326670 . G . PASS END=89326963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:93:31:0,93,1157:0,93,255:40,0 chr2 89327133 . C . PASS END=89327181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,194,255:40,0 chr2 89339721 . A . PASS END=89339727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 89339728 . C . PASS END=89339760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,989:0,84,255:34,0 chr2 89339761 . T . PASS END=89339761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr2 89339762 . C . PASS END=89340002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1250:0,87,255:40,0 chr2 89340003 . G . PASS END=89340003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1061:0,38,255:28,0 chr2 89340004 . T . PASS END=89340008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:29,0 chr2 89340009 . T . PASS END=89340009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:28,0 chr2 89340010 . C . PASS END=89340016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr2 89384673 . A . PASS END=89384679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:23,0 chr2 89384680 . T . PASS END=89384680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 89384681 . T . PASS END=89384681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr2 89384682 . A . PASS END=89384686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 89384687 . A . PASS END=89384687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 89384688 . C . PASS END=89384694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 89384695 . C . PASS END=89384695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 89384696 . A . PASS END=89384890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1046:0,91,255:40,0 chr2 89384891 . A . PASS END=89384903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:28:0,63,945:0,71,255:24,0 chr2 89384904 . T . PASS END=89384904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,857:0,45,255:21,0 chr2 89384905 . C . PASS END=89384914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:22,0 chr2 89384915 . G . PASS END=89384929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,46,255:18,0 chr2 89384930 . T . PASS END=89384931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:18:0,27,405:0,54,255:9,0 chr2 89384932 . G . PASS END=89384932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 89384933 . C . PASS END=89384946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,566:0,45,255:15,0 chr2 89384947 . A . PASS END=89384947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 89384948 . T . PASS END=89384949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 89384950 . A . PASS END=89384950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:12,0 chr2 89384951 . C . PASS END=89384956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 89384957 . C . PASS END=89384968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 89385138 . C . PASS END=89385138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 89385139 . T . PASS END=89385140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 89385141 . G . PASS END=89385186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:33,0 chr2 89399352 . A . PASS END=89399369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr2 89399370 . T . PASS END=89399370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,468:0,34,255:15,0 chr2 89399371 . T . PASS END=89399390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,646:0,51,255:19,0 chr2 89399391 . A . PASS END=89399419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:23,0 chr2 89399420 . G . PASS END=89399427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:31,0 chr2 89399428 . T . PASS END=89399428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 89399429 . C . PASS END=89399548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1089:0,86,255:37,0 chr2 89399549 . T . PASS END=89399549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 89399550 . A . PASS END=89399561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 89399562 . C . PASS END=89399571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 89399572 . G . PASS END=89399582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 89399583 . T . PASS END=89399608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr2 89399609 . A . PASS END=89399626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:16:0,44,675:0,44,255:17,0 chr2 89399627 . T . PASS END=89399642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:13,0 chr2 89399643 . G . PASS END=89399643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 89399644 . G . PASS END=89399647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 89442057 . A . PASS END=89442063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:25,0 chr2 89442064 . C . PASS END=89442355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:80:30:0,80,1111:0,80,255:40,0 chr2 89442543 . C . PASS END=89442591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:80:0,120,1800:0,214,255:40,0 chr2 89459235 . A . PASS END=89459428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:87:34:0,87,1305:0,93,255:40,0 chr2 89459429 . T . PASS END=89459437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,73,255:25,0 chr2 89459438 . T . PASS END=89459438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:20,0 chr2 89459439 . C . PASS END=89459451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 89459452 . C . PASS END=89459479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,599:0,40,255:19,0 chr2 89459480 . T . PASS END=89459480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 89459481 . C . PASS END=89459489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 89459490 . A . PASS END=89459500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,540:0,32,255:13,0 chr2 89459501 . A . PASS END=89459502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 89459503 . T . PASS END=89459517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 89459518 . T . PASS END=89459518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr2 89459519 . C . PASS END=89459527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 89459528 . A . PASS END=89459528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 89459529 . G . PASS END=89459530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:11,0 chr2 89459741 . C . PASS END=89459786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,153,255:40,0 chr2 89475812 . A . PASS END=89476041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:95:36:0,95,1335:0,95,255:40,0 chr2 89476566 . C . PASS END=89476582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:21,0 chr2 89476583 . A . PASS END=89476583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:20,0 chr2 89476584 . G . PASS END=89476591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr2 89476592 . A . PASS END=89476592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 89476593 . G . PASS END=89476605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,784:0,66,255:22,0 chr2 89476606 . G . PASS END=89476609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,745:0,49,255:20,0 chr2 89476610 . C . PASS END=89476610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 89476611 . T . PASS END=89476611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr2 89476612 . C . PASS END=89476613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 89476614 . T . PASS END=89476614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 89513328 . C . PASS END=89513329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,433:0,25,255:12,0 chr2 89513330 . G . PASS END=89513340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 89513341 . C . PASS END=89513341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr2 89513342 . A . PASS END=89513362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 89513363 . G . PASS END=89513363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 89513364 . C . PASS END=89513365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 89513366 . G . PASS END=89513366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 89513367 . G . PASS END=89513372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 89513373 . T . PASS END=89513373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 89513374 . C . PASS END=89513374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 89513375 . A . PASS END=89513382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 89521179 . A . PASS END=89521186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 89521187 . G . PASS END=89521187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 89521188 . T . PASS END=89521188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 89521189 . A . PASS END=89521189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 89521190 . G . PASS END=89521195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 89521196 . G . PASS END=89521196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 89521197 . C . PASS END=89521200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 89521201 . C . PASS END=89521201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 89521202 . A . PASS END=89521213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 89521214 . C . PASS END=89521223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 89521224 . A . PASS END=89521229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:36:20:0,36,540:0,47,255:13,0 chr2 89521230 . C . PASS END=89521245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr2 89521246 . A . PASS END=89521270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 89521271 . T . PASS END=89521282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 89521283 . T . PASS END=89521304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,164:6,0 chr2 89521305 . A . LowGQ END=89521305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 89521306 . T . PASS END=89521322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr2 89521323 . C . LowGQ END=89521323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 89521324 . A . PASS END=89521336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,133:0,15,133:5,0 chr2 89521337 . A . PASS END=89521380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,47:3,0 chr2 89521381 . T . PASS END=89521444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 89521445 . G . PASS END=89521452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 89521453 . A . PASS END=89521489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 89544345 . G . PASS END=89544574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,108,1482:0,110,255:40,0 chr2 89567752 . T . PASS END=89567779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:2,0 chr2 89567780 . C . PASS END=89567873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 89567874 . C . LowGQ END=89567874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 89567875 . T . PASS END=89567881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 89567882 . A . LowDepth;LowGQ END=89568042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr2 89597094 . A . LowGQ END=89597135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,22:0,0,33:3,0 chr2 89597136 . C . PASS END=89597243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,55:3,0 chr2 89619383 . A . LowDepth;LowGQ END=89619678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 89629867 . T . LowDepth;LowGQ END=89630178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 89890996 . G . LowDepth;LowGQ END=89891165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr2 89891166 . G . LowDepth;LowGQ END=89891307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 89901494 . G . LowDepth;LowGQ END=89901791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 89923803 . A . PASS END=89923834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr2 89923835 . T . PASS END=89923854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:4,0 chr2 89923855 . A . LowGQ END=89923855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr2 89923856 . A . PASS END=89923893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 89923894 . C . LowGQ END=89923952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,22:0,0,33:3,0 chr2 89953071 . G . LowGQ END=89953278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:0:0,0,0:0,0,0:3,0 chr2 89953279 . A . PASS END=89953295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 89953296 . A . LowGQ END=89953361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:1:0,0,39:0,0,39:3,0 chr2 89976179 . G . PASS END=89976409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:86:41:0,86,1513:0,86,255:40,0 chr2 89986352 . A . LowGQ END=89986354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,303:0,0,255:14,0 chr2 89986355 . A . PASS END=89986355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:13,0 chr2 89986356 . G . PASS END=89986356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr2 89986357 . G . LowGQ END=89986357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,393:5,0,255:12,0 chr2 89986358 . C . PASS END=89986358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr2 89986359 . T . LowGQ END=89986359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,341:5,0,255:11,0 chr2 89986360 . C . PASS END=89986361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 89986362 . C . LowGQ END=89986364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,304:5,0,255:12,0 chr2 89986365 . C . PASS END=89986365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:13,0 chr2 89986366 . T . PASS END=89986366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,443:0,14,255:13,0 chr2 89986367 . C . PASS END=89986367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 89986368 . A . PASS END=89986368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:12,0 chr2 89986369 . G . PASS END=89986369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 89986370 . C . LowGQ END=89986370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,351:5,0,255:12,0 chr2 89986371 . T . PASS END=89986371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:13,0 chr2 89986372 . C . PASS END=89986372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr2 89986373 . C . LowGQ END=89986374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,269:5,0,255:12,0 chr2 89986375 . G . PASS END=89986375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 89986376 . G . PASS END=89986376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr2 89986377 . G . PASS END=89986378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 89986379 . C . LowGQ END=89986379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,308:43,0,255:11,0 chr2 89986380 . T . PASS END=89986380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 89986381 . G . PASS END=89986381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:13,0 chr2 89986382 . C . LowGQ END=89986385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,286:0,0,255:13,0 chr2 89986386 . T . PASS END=89986386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 89986387 . G . LowGQ END=89986388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,349:19,0,255:10,0 chr2 89986389 . T . PASS END=89986389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 89986390 . C . LowGQ END=89986390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,338:21,0,255:10,0 chr2 89986391 . T . PASS END=89986391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:12,0 chr2 89986392 . G . PASS END=89986392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 89986393 . G . LowGQ END=89986393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,5:15:0:15:0,0,238:82,0,255:9,0 chr2 89986394 . A . PASS END=89986395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:13,0 chr2 89986396 . A . LowGQ END=89986396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,288:5,0,255:11,0 chr2 89986397 . C . PASS END=89986397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,396:0,12,255:12,0 chr2 89986398 . C . LowGQ END=89986398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,316:43,0,255:10,0 chr2 89986399 . T . PASS END=89986399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr2 89986400 . G . PASS END=89986400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,357:0,9,255:12,0 chr2 89986780 . G . PASS END=89986780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 89986781 . A . PASS END=89986786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr2 89986787 . T . PASS END=89986787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:16,0 chr2 89986788 . G . PASS END=89986788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 89986789 . A . PASS END=89986803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,662:0,54,255:19,0 chr2 89986804 . C . PASS END=89986804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 89986805 . T . PASS END=89986805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 89986806 . C . PASS END=89986806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 89986807 . T . PASS END=89986807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr2 89986808 . C . PASS END=89986823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:24,0 chr2 89986824 . T . PASS END=89986824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 89986825 . G . PASS END=89986827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr2 89986828 . C . PASS END=89986828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,837:0,23,255:23,0 chr2 89986829 . A . PASS END=89986840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,969:0,65,255:26,0 chr2 89986841 . T . PASS END=89986841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 89986842 . C . PASS END=89986846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 89986847 . G . PASS END=89986847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:25,0 chr2 89986848 . C . PASS END=89986851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 89986852 . T . PASS END=89986857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 89986858 . C . PASS END=89986858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 89986859 . A . PASS END=89986859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 89986860 . G . PASS END=89986865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,941:0,67,255:26,0 chr2 89986866 . C . PASS END=89986867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 89986868 . T . PASS END=89986868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,933:0,57,255:26,0 chr2 89986869 . G . PASS END=89986871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 89986872 . T . PASS END=89986900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:25,0 chr2 89986901 . A . PASS END=89986901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 89986902 . C . PASS END=89986912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 89986913 . C . PASS END=89986913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 89986914 . A . PASS END=89986920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 89986921 . C . PASS END=89986921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 89986922 . C . PASS END=89986929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 89986930 . C . PASS END=89986930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 89986931 . T . PASS END=89986932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 89986933 . C . PASS END=89986933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 89986934 . T . PASS END=89986938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr2 89986939 . T . PASS END=89986939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 89986940 . A . PASS END=89986952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:23,0 chr2 89986953 . C . PASS END=89986953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 89986954 . C . PASS END=89986958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:21,0 chr2 89986959 . C . PASS END=89986960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:20,0 chr2 89986961 . C . PASS END=89986963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 89986964 . G . PASS END=89986972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 89986973 . A . PASS END=89986973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 89986974 . T . PASS END=89986986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:19:0,42,630:0,49,255:18,0 chr2 89986987 . A . PASS END=89986987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:14,0 chr2 89986988 . G . PASS END=89986997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 89986998 . G . PASS END=89987005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 89987006 . T . PASS END=89987006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 89987007 . C . PASS END=89987021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 89987022 . C . PASS END=89987022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr2 89987023 . C . PASS END=89987024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 89987025 . G . PASS END=89987029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 89987030 . A . PASS END=89987030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 89987031 . G . PASS END=89987033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 89987034 . T . PASS END=89987034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 89987035 . G . PASS END=89987040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 89987041 . G . PASS END=89987041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 89987042 . T . PASS END=89987042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr2 89987043 . T . PASS END=89987045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 89987046 . G . PASS END=89987046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:9,0 chr2 89987047 . G . PASS END=89987047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 89987048 . T . PASS END=89987048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:10,0 chr2 89987049 . T . PASS END=89987055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr2 89987056 . T . PASS END=89987058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr2 89987059 . A . PASS END=89987059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 89987060 . T . PASS END=89987061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 89987062 . C . PASS END=89987080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 89987081 . C . PASS END=89987085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 89999259 . G . PASS END=89999259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 89999260 . A . LowGQ END=89999260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr2 89999261 . T . PASS END=89999261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 89999262 . A . LowGQ END=89999262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:3,0 chr2 89999263 . T . PASS END=89999264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 89999265 . G . LowGQ END=89999265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 89999266 . T . PASS END=89999277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr2 89999278 . C . LowGQ END=89999278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 89999279 . T . PASS END=89999280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr2 89999281 . C . LowGQ END=89999295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,100:0,0,102:3,0 chr2 89999296 . T . PASS END=89999296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 89999297 . C . PASS END=89999298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 89999299 . C . PASS END=89999312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:4,0 chr2 89999313 . G . PASS END=89999313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 89999314 . C . PASS END=89999320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 89999321 . C . PASS END=89999321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr2 89999322 . T . PASS END=89999328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr2 89999329 . G . PASS END=89999356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,250:0,21,250:9,0 chr2 89999357 . T . PASS END=89999357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 89999358 . G . PASS END=89999365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 89999366 . C . PASS END=89999369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 89999370 . T . PASS END=89999370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 89999371 . T . PASS END=89999374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 89999375 . T . PASS END=89999375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 89999376 . T . PASS END=89999382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 89999383 . T . PASS END=89999383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 89999384 . G . PASS END=89999438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:13,0 chr2 89999439 . T . PASS END=89999442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 89999443 . G . PASS END=89999443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr2 89999444 . G . PASS END=89999491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:18,0 chr2 89999492 . G . PASS END=89999492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 89999493 . A . PASS END=89999493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 89999494 . A . PASS END=89999494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 89999495 . A . PASS END=89999501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,692:0,51,255:19,0 chr2 89999502 . A . PASS END=89999505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 89999506 . T . PASS END=89999509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 89999510 . G . PASS END=89999521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,723:0,63,255:21,0 chr2 89999522 . T . PASS END=89999522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 89999523 . G . PASS END=89999524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr2 89999525 . G . PASS END=89999525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 89999526 . G . PASS END=89999530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr2 89999531 . T . PASS END=89999531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 89999532 . T . PASS END=89999541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 89999542 . A . PASS END=89999542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 89999543 . A . PASS END=89999551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 89999552 . A . PASS END=89999553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:19,0 chr2 89999554 . C . PASS END=89999555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 89999556 . C . PASS END=89999556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:18,0 chr2 89999557 . C . PASS END=89999564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 90025202 . G . PASS END=90025204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 90025205 . C . PASS END=90025205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 90025206 . C . PASS END=90025206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 90025207 . A . PASS END=90025210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 90025211 . C . PASS END=90025211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:10,0 chr2 90025212 . A . PASS END=90025216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 90025217 . T . PASS END=90025217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 90025218 . T . PASS END=90025227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr2 90025228 . C . PASS END=90025228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 90025229 . A . PASS END=90025234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 90025235 . C . PASS END=90025235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 90025236 . A . PASS END=90025236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:13,0 chr2 90025237 . C . PASS END=90025237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 90025238 . T . PASS END=90025238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,449:0,3,255:13,0 chr2 90025239 . C . PASS END=90025252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,551:0,45,255:19,0 chr2 90025253 . C . PASS END=90025282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:24,0 chr2 90025283 . G . PASS END=90025297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr2 90025298 . T . PASS END=90025301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1069:0,71,255:26,0 chr2 90025302 . G . PASS END=90025302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 90025303 . C . PASS END=90025325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr2 90025326 . G . PASS END=90025327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 90025328 . A . PASS END=90025328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 90025329 . T . PASS END=90025341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr2 90025342 . A . PASS END=90025342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 90025343 . A . PASS END=90025347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1080:0,87,255:29,0 chr2 90025348 . A . PASS END=90025348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:26,0 chr2 90025349 . G . PASS END=90025352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 90025353 . A . PASS END=90025353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 90025354 . G . PASS END=90025354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 90025355 . T . PASS END=90025355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:28,0 chr2 90025356 . C . PASS END=90025365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:30,0 chr2 90025366 . C . PASS END=90025366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr2 90025367 . T . PASS END=90025368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 90025369 . A . PASS END=90025369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 90025370 . T . PASS END=90025372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 90025373 . A . PASS END=90025373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 90025374 . T . PASS END=90025386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 90025387 . C . PASS END=90025401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,953:0,62,255:25,0 chr2 90025402 . C . PASS END=90025403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:25:0,47,876:0,47,255:21,0 chr2 90025404 . A . PASS END=90025406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 90025407 . T . PASS END=90025408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 90025409 . G . PASS END=90025409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 90025410 . G . PASS END=90025410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 90025411 . T . PASS END=90025413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:20,0 chr2 90025414 . A . PASS END=90025425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,55,255:19,0 chr2 90025426 . T . PASS END=90025426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:17,0 chr2 90025427 . C . PASS END=90025454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,537:0,45,255:17,0 chr2 90025455 . C . PASS END=90025490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,32,255:13,0 chr2 90025491 . C . PASS END=90025504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,341:0,27,255:9,0 chr2 90025505 . A . PASS END=90025512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 90043637 . A . PASS END=90043660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1197:0,83,255:33,0 chr2 90043661 . G . PASS END=90043671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1100:0,77,255:27,0 chr2 90043672 . G . PASS END=90043681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 90043682 . C . PASS END=90043685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 90044129 . G . PASS END=90044131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,429:0,36,255:13,0 chr2 90044132 . C . PASS END=90044145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:14:0,40,490:0,40,255:19,0 chr2 90044146 . G . PASS END=90044151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:23,0 chr2 90044152 . A . PASS END=90044152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr2 90044153 . C . PASS END=90044156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,860:0,69,255:26,0 chr2 90044157 . G . PASS END=90044164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr2 90044165 . T . PASS END=90044165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr2 90044166 . C . PASS END=90044439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:86:32:0,86,1213:0,86,255:40,1 chr2 90060444 . A . PASS END=90060489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:84:0,120,1800:0,203,255:40,0 chr2 90060700 . C . PASS END=90060709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:25,0 chr2 90060710 . T . PASS END=90060710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:23,0 chr2 90060711 . G . PASS END=90060735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,833:0,72,255:25,0 chr2 90060736 . A . PASS END=90060736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:23,0 chr2 90060737 . C . PASS END=90060756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:29,0 chr2 90060757 . A . PASS END=90060757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,912:0,73,255:28,0 chr2 90060758 . G . PASS END=90060759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 90060760 . A . PASS END=90060760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 90060761 . G . PASS END=90060772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1052:0,93,255:34,0 chr2 90060773 . C . PASS END=90060773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr2 90060774 . A . PASS END=90060978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:34:0,90,1242:0,95,255:40,0 chr2 90060979 . A . PASS END=90060979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr2 90060980 . G . PASS END=90060988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1194:0,86,255:30,0 chr2 90060989 . T . PASS END=90060989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,870:0,79,255:29,0 chr2 90060990 . T . PASS END=90060995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 90077777 . A . PASS END=90077825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:79:0,120,1800:0,224,255:40,0 chr2 90078013 . A . PASS END=90078251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:93:37:0,93,1335:0,95,255:40,0 chr2 90078252 . A . PASS END=90078252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr2 90078253 . G . PASS END=90078268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:32,0 chr2 90078269 . A . PASS END=90078269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:28,0 chr2 90078270 . G . PASS END=90078274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:28,0 chr2 90078275 . T . PASS END=90078276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1115:0,77,255:28,0 chr2 90078277 . C . PASS END=90078277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 90078278 . A . PASS END=90078285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,77,255:24,0 chr2 90078286 . A . PASS END=90078286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:22,0 chr2 90078287 . C . PASS END=90078290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:22,0 chr2 90078291 . C . PASS END=90078298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:23:0,42,630:0,56,255:20,0 chr2 90078299 . T . PASS END=90078302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 90078303 . A . PASS END=90078303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:12,0 chr2 90078304 . G . PASS END=90078311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 90108530 . A . PASS END=90108578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:43:0,85,1543:0,85,255:40,0 chr2 90108785 . C . PASS END=90108815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:32:0,93,1305:0,95,255:40,0 chr2 90108816 . T . PASS END=90109076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,101,255:40,0 chr2 90109077 . C . PASS END=90109080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 90121838 . G . PASS END=90121838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr2 90121839 . T . PASS END=90121842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 90121843 . A . PASS END=90121843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 90121844 . G . PASS END=90121844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 90121845 . A . PASS END=90121845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 90121846 . T . PASS END=90121860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:18,0 chr2 90121861 . A . PASS END=90121861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 90121862 . C . PASS END=90121880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr2 90121881 . G . PASS END=90121881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 90121882 . T . PASS END=90121882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 90121883 . C . PASS END=90121890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:24,0 chr2 90121891 . G . PASS END=90121891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 90121892 . T . PASS END=90121893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 90121894 . G . PASS END=90121897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 90121898 . A . PASS END=90121902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 90121903 . G . PASS END=90121923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1064:0,87,255:31,0 chr2 90121924 . A . PASS END=90121960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1158:0,85,255:36,0 chr2 90121961 . A G, 49.80 PASS DP=35;MQ=138.93;MQRankSum=0.871;ReadPosRankSum=3.499;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,22,0:0.629,0.000:35:9,14,0:4,8,0:45:85,0,44,787,428,1215:255,0,255:11,0:4.9800e+01,1.2866e-04,4.7174e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,12,10:9,4,14,8 chr2 90121962 . G . PASS END=90121998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:34:0,89,1249:0,89,255:38,0 chr2 90121999 . G . PASS END=90122034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,92,255:38,0 chr2 90122035 . A . PASS END=90122035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:27,0 chr2 90122036 . G . PASS END=90122049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1208:0,83,255:30,0 chr2 90122050 . G . PASS END=90122050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 90122051 . G . PASS END=90122053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 90122054 . C . PASS END=90122067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:24,0 chr2 90122068 . A . PASS END=90122073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:23:0,48,720:0,59,255:19,0 chr2 90122074 . A . PASS END=90122076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:17,0 chr2 90122077 . A . PASS END=90122079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:17,0 chr2 90122080 . C . PASS END=90122092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 90122093 . A . PASS END=90122097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr2 90122098 . G . PASS END=90122115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,47,255:17,0 chr2 90122116 . C . PASS END=90122121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:15:0,34,582:0,34,255:14,0 chr2 90122122 . A . PASS END=90122122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 90122123 . A . PASS END=90122126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 90122127 . T . PASS END=90122129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 90122130 . C . PASS END=90122133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 90139285 . G . PASS END=90139295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,746:0,52,255:21,0 chr2 90139296 . G . PASS END=90139311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,845:0,66,255:26,0 chr2 90139312 . A . PASS END=90139574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1149:0,84,255:40,0 chr2 90139575 . T . PASS END=90139580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,93,255:26,0 chr2 90153745 . A . PASS END=90153793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,99,1578:0,99,255:40,0 chr2 90153963 . A . PASS END=90153965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 90153966 . C . PASS END=90153985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 90153986 . A . PASS END=90153986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 90153987 . C T, 33.11 PASS DP=10;MQ=18.12;MQRankSum=2.383;ReadPosRankSum=1.866;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,6,0:0.600,0.000:10:2,3,0:2,3,0:16:68,0,13,215,143,358:203,0,125:4,0:3.3107e+01,1.0683e-01,1.6232e+01,2.1472e+02,1.7791e+02,3.6075e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,4,2:3,1,3,3 chr2 90153988 . G . PASS END=90153989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 90153990 . A . PASS END=90153990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 90153991 . G . PASS END=90153992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 90153993 . C . PASS END=90154011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr2 90154012 . G . PASS END=90154012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 90154013 . T . PASS END=90154013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 90154014 . C . PASS END=90154017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 90154018 . A . PASS END=90154018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr2 90154019 . G . PASS END=90154024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 90154025 . A . PASS END=90154030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 90154031 . A . PASS END=90154032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 90154033 . C . PASS END=90154033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr2 90154034 . C . PASS END=90154034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr2 90154035 . T . PASS END=90154238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1100:0,86,255:40,0 chr2 90154239 . A . PASS END=90154241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:32:0,69,1035:0,80,255:26,0 chr2 90154242 . A . PASS END=90154259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:42:19:0,42,630:0,57,255:18,0 chr2 90154260 . C . PASS END=90154260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr2 90198895 . G . PASS END=90198895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 90198896 . T . PASS END=90198896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 90198897 . T . PASS END=90198902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 90198903 . T . PASS END=90198916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:24,0 chr2 90198917 . G . PASS END=90198917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr2 90198918 . A . PASS END=90198919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 90198920 . C . PASS END=90198920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 90198921 . C . PASS END=90198922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 90198923 . G . PASS END=90198928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 90198929 . A . PASS END=90198980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,886:0,62,255:26,0 chr2 90198981 . A . PASS END=90199085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1037:0,83,255:34,0 chr2 90199086 . A . PASS END=90199086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 90199087 . G . PASS END=90199122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1050:0,90,255:30,0 chr2 90199123 . T . PASS END=90199147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 90199148 . A . PASS END=90199148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 90199149 . G . PASS END=90199149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 90199150 . A . PASS END=90199150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 90199151 . T . PASS END=90199151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 90199152 . T . PASS END=90199152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,601:0,46,255:19,0 chr2 90199153 . T . PASS END=90199155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 90199156 . C . PASS END=90199160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 90199161 . T . PASS END=90199161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr2 90199162 . A . PASS END=90199174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 90199175 . G . PASS END=90199188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 90199189 . C . PASS END=90199190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 90211740 . A . PASS END=90211788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:86:0,120,1800:0,229,255:40,0 chr2 90211958 . A . PASS END=90211960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 90211961 . C . PASS END=90212012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,135,255:40,0 chr2 90212013 . A . PASS END=90212049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,143,255:40,0 chr2 90212050 . G A, 43.25 PASS DP=60;MQ=64.36;MQRankSum=-3.171;ReadPosRankSum=4.058;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,30,0:0.500,0.000:60:17,17,0:13,13,0:42:78,0,45,1031,1044,2075:255,0,255:23,0:4.3250e+01,2.6896e-04,4.8350e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,17,9,21:16,14,12,18 chr2 90212051 . G . PASS END=90212087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,146,255:40,0 chr2 90212088 . T . PASS END=90212181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,96,255:40,0 chr2 90212182 . A . PASS END=90212186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 90212187 . C . PASS END=90212190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 90212191 . A . PASS END=90212219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr2 90212220 . A . PASS END=90212255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr2 90229236 . G . PASS END=90229241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,451:0,36,255:13,0 chr2 90229242 . G . PASS END=90229267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,484:0,42,255:19,0 chr2 90229268 . C . PASS END=90229321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,731:0,60,255:26,0 chr2 90229322 . A . PASS END=90229335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1002:0,81,255:29,0 chr2 90229336 . C . PASS END=90229336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 90229337 . A . PASS END=90229337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 90229338 . G . PASS END=90229339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 90229340 . A . PASS END=90229346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:28,0 chr2 90229347 . C . PASS END=90229347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr2 90229348 . C . PASS END=90229398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1025:0,80,255:32,0 chr2 90229399 . A . PASS END=90229400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 90229401 . A . PASS END=90229404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 90229405 . T . PASS END=90229405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr2 90229406 . T . PASS END=90229407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 90229408 . G . PASS END=90229408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 90229409 . C . PASS END=90229424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 90229425 . C . PASS END=90229425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 90229426 . G . PASS END=90229427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 90229428 . G . PASS END=90229443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,969:0,65,255:26,0 chr2 90229444 . A . PASS END=90229448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 90229449 . G . PASS END=90229452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 90229453 . G . PASS END=90229454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:28:0,45,1000:0,45,255:26,0 chr2 90229455 . A . PASS END=90229460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 90229461 . C . PASS END=90229462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 90229463 . C . PASS END=90229473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:23,0 chr2 90229474 . C . PASS END=90229519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,630:0,40,255:19,0 chr2 90229520 . T . PASS END=90229530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:13,0 chr2 90229531 . T . PASS END=90229531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr2 90229532 . C . PASS END=90229533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr2 90248920 . A . PASS END=90248938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:68:23:0,68,853:0,68,255:27,0 chr2 90248939 . C . PASS END=90248941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 90248942 . A . PASS END=90248942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 90248943 . G . PASS END=90248950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 90248951 . G . PASS END=90248973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr2 90248974 . G . PASS END=90248974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 90249100 . G . PASS END=90249126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,832:0,75,255:26,0 chr2 90249127 . A . PASS END=90249127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 90249128 . G . PASS END=90249131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 90249132 . C . PASS END=90249139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 90249140 . C . PASS END=90249142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 90249143 . G . PASS END=90249245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,84,255:39,0 chr2 90249246 . C . PASS END=90249246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1185:0,76,255:36,0 chr2 90249247 . T . PASS END=90249313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1263:0,89,255:39,0 chr2 90249314 . G . PASS END=90249322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,83,255:26,0 chr2 90259953 . G . PASS END=90259959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,668:0,41,255:19,0 chr2 90259960 . A . PASS END=90259960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,582:0,27,255:18,0 chr2 90259961 . T . PASS END=90259978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,693:0,60,255:26,0 chr2 90259979 . C . PASS END=90260002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:34,0 chr2 90260003 . T . PASS END=90260003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:31,0 chr2 90260004 . C . PASS END=90260176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:35:0,84,1282:0,84,255:40,0 chr2 90273704 . A . LowDepth;LowGQ END=90273761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 90273937 . A . LowDepth;LowGQ END=90274162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 91825028 . T . PASS END=91825057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:293,1:294:99:270:0,120,1800:0,255,255:40,0 chr2 91825058 . G . PASS END=91825094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:333,1:334:99:298:0,120,1800:0,255,255:40,0 chr2 91825095 . C T, 45.35 PASS DP=348;MQ=67.73;MQRankSum=-10.943;ReadPosRankSum=10.862;FractionInformativeReads=0.997;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:132,215,0:0.620,0.000:347:70,107,0:62,108,0:43:80,0,43,180,180,180:255,0,255:40,0:4.5350e+01,2.3376e-04,4.6081e+01,1.8012e+02,2.1489e+02,1.8313e+02:0.00,34.77,37.78,34.77,69.54,37.78:48,84,71,144:70,62,101,114 chr2 91825096 . C . PASS END=91825132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:334,2:336:99:319:0,120,1800:0,255,255:40,0 chr2 91825133 . C . PASS END=91825204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:248,1:249:99:217:0,120,1800:0,255,255:40,0 chr2 91842946 . C . PASS END=91843023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:82:0,120,1800:0,214,255:40,0 chr2 91888017 . T . PASS END=91888087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,131,255:40,0 chr2 91888088 . A . PASS END=91888124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:52:0,120,1800:0,121,255:40,0 chr2 91888125 . C T, 32.34 PASS DP=53;MQ=25.02;MQRankSum=2.350;ReadPosRankSum=2.457;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,29,0:0.547,0.000:53:12,9,0:12,20,0:32:67,0,40,1027,827,1853:255,0,255:20,0:3.2336e+01,2.7466e-03,4.3161e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,21,8:10,14,13,16 chr2 91888126 . C . PASS END=91888134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr2 91888390 . C . PASS END=91888455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:227,1:228:99:208:0,120,1800:0,255,255:40,0 chr2 91888456 . C A, 23.76 PASS DP=212;MQ=33.84;MQRankSum=1.943;ReadPosRankSum=7.844;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:148,63,0:0.299,0.000:211:81,33,0:67,30,0:24:59,0,39,2120,5282,7402:255,0,255:40,0:2.3762e+01,1.8578e-02,4.2019e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:55,93,18,45:80,68,36,27 chr2 91888457 . T . PASS END=91888493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:203,0:203:99:174:0,120,1800:0,255,255:40,0 chr2 91888494 . G . PASS END=91888571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:58:0,120,1800:0,158,255:40,0 chr2 91893844 . C . PASS END=91893948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:242,0:242:99:111:0,120,1800:0,234,255:40,0 chr2 91894141 . C . PASS END=91894156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:210,2:212:99:208:0,120,1800:0,255,255:40,0 chr2 91894157 . T . PASS END=91894185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:214,1:215:99:206:0,120,1800:0,255,255:40,0 chr2 95511125 . C . PASS END=95511180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,120,1800:0,226,255:40,0 chr2 95513762 . T . PASS END=95513899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:42:0,108,1620:0,110,255:40,0 chr2 95514946 . C . PASS END=95515052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:54:0,120,1800:0,149,255:40,0 chr2 95537325 . A . PASS END=95537325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 95537326 . T . PASS END=95537353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:18,0 chr2 95537354 . G . PASS END=95537355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 95537356 . C . PASS END=95537400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,684:0,44,255:19,0 chr2 95537401 . C . PASS END=95537414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr2 95537415 . A . PASS END=95537433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 95537434 . C . PASS END=95537442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:20,0 chr2 95537443 . T . PASS END=95537444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 95537445 . C . PASS END=95537449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95537450 . G . PASS END=95537453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 95537454 . T . PASS END=95537454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95537455 . G . PASS END=95537455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 95537456 . G . PASS END=95537459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 95537460 . C . PASS END=95537475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 95537476 . G . PASS END=95537476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 95537477 . C . PASS END=95537479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 95537480 . C . PASS END=95537480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 95537481 . C . PASS END=95537490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:17,0 chr2 95537491 . T . PASS END=95537491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 95537492 . C . PASS END=95537514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,574:0,48,255:17,0 chr2 95537515 . G . PASS END=95537515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 95537516 . G . PASS END=95537520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 95537521 . G . PASS END=95537521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 95537522 . G . PASS END=95537522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 95537523 . C . PASS END=95537539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 95537540 . G . PASS END=95537543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 95537544 . A . PASS END=95537559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr2 95537560 . T . PASS END=95537560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 95537561 . G . PASS END=95537569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr2 95537570 . C . PASS END=95537573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 95537574 . C . PASS END=95537605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,668:0,46,255:19,0 chr2 95537606 . A . PASS END=95537606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 95537607 . C . PASS END=95537609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr2 95537610 . C . PASS END=95537632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 95537633 . G . PASS END=95537637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 95537638 . T . PASS END=95537649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 95537650 . T . PASS END=95537650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr2 95537651 . G . PASS END=95537654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 95537655 . G . PASS END=95537655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 95537656 . C . PASS END=95537676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,939:0,69,255:25,0 chr2 95537677 . T . PASS END=95537677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 95537678 . G . PASS END=95537681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 95537682 . C . PASS END=95537682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 95537683 . T . PASS END=95537718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:24:0,62,848:0,62,255:26,0 chr2 95537719 . C . PASS END=95537720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 95537721 . A . PASS END=95537721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 95537722 . C . PASS END=95537729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 95537730 . C . PASS END=95537730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 95537731 . C . PASS END=95537759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:29:0,82,1133:0,82,255:32,0 chr2 95537760 . T . PASS END=95537760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 95537761 . G . PASS END=95537777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:32,0 chr2 95537778 . C . PASS END=95537791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:25:0,63,945:0,75,255:25,0 chr2 95537792 . G . PASS END=95537792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 95537793 . C . PASS END=95537797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 95537798 . C . PASS END=95537822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,653:0,54,255:19,0 chr2 95539265 . G . PASS END=95539321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1411:0,87,255:40,0 chr2 95539322 . G . PASS END=95539322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1434:0,76,255:36,0 chr2 95539323 . T . PASS END=95539325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 95539326 . G . PASS END=95539326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1380:0,73,255:36,0 chr2 95539327 . C . PASS END=95539335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1380:0,98,255:38,0 chr2 95539710 . A . PASS END=95539721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,923:0,78,255:26,0 chr2 95539722 . G . PASS END=95539754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1168:0,86,255:36,0 chr2 95539755 . C . PASS END=95539755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1317:0,73,255:36,0 chr2 95539756 . A . PASS END=95539830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1215:0,84,255:37,1 chr2 95539831 . T . PASS END=95539851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,64,255:26,0 chr2 95539852 . A . PASS END=95539852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 95539853 . G . PASS END=95539853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95540521 . C . PASS END=95540546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:19,0 chr2 95540547 . A . PASS END=95540551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,719:0,63,255:22,0 chr2 95540552 . A . PASS END=95540552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr2 95540553 . C . PASS END=95540553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 95540554 . G . PASS END=95540567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,903:0,66,255:26,0 chr2 95540568 . G . PASS END=95540570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 95540571 . G . PASS END=95540594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr2 95540595 . C . PASS END=95540595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 95540596 . G . PASS END=95540598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,937:0,75,255:25,0 chr2 95540599 . C . PASS END=95540600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 95540601 . A . PASS END=95540621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:23,0 chr2 95540622 . G . PASS END=95540626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 95540627 . C . PASS END=95540631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95540632 . C . PASS END=95540632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 95540633 . G . PASS END=95540634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 95540635 . C . PASS END=95540636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 95540637 . C . PASS END=95540638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 95540639 . T . PASS END=95540639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:20,0 chr2 95540640 . C . PASS END=95540640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 95540641 . C . PASS END=95540641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 95540642 . G . PASS END=95540646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 95540647 . C . PASS END=95540647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 95540648 . C . PASS END=95540650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95540651 . C . PASS END=95540660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr2 95540661 . G . PASS END=95540661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,706:0,19,255:17,0 chr2 95540662 . C . PASS END=95540673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,593:0,43,255:19,0 chr2 95540674 . C . PASS END=95540676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 95540677 . G . PASS END=95540699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr2 95540700 . A . PASS END=95540705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 95540706 . A . PASS END=95540713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr2 95540714 . C . PASS END=95540738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 95540739 . A . PASS END=95540743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 95541210 . G . PASS END=95541212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 95541213 . C . PASS END=95541213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 95541214 . A . PASS END=95541216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 95541217 . G . PASS END=95541219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 95541220 . C . PASS END=95541220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 95541221 . A . PASS END=95541240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:12,0 chr2 95541241 . G . PASS END=95541279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,482:0,42,255:19,0 chr2 95541280 . C . PASS END=95541281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 95541282 . A . PASS END=95541282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 95541283 . T . PASS END=95541309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,701:0,62,255:25,0 chr2 95541310 . A . PASS END=95541403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1133:0,80,255:35,0 chr2 95541404 . A . PASS END=95541404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:32,0 chr2 95541405 . C . PASS END=95541449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1208:0,83,255:36,0 chr2 95541450 . C . PASS END=95541473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr2 95541474 . G . PASS END=95541477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:24:0,51,765:0,72,255:19,0 chr2 95541478 . C . PASS END=95541479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 95541480 . C . PASS END=95541487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:21:0,54,810:0,63,255:19,0 chr2 95542298 . G . PASS END=95542498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:37:0,97,1358:0,97,255:40,0 chr2 95542499 . G . PASS END=95542499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr2 95542500 . G . PASS END=95542514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1349:0,95,255:36,0 chr2 95691538 . A . PASS END=95691548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,584:0,51,255:17,0 chr2 95691549 . A . PASS END=95691549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 95691550 . G . PASS END=95691562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:19,0 chr2 95691563 . G . PASS END=95691573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 95691574 . C . PASS END=95691574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 95691575 . C . PASS END=95691576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 95691577 . A . PASS END=95691577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr2 95691578 . G . PASS END=95691606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 95691607 . G . PASS END=95691614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 95691615 . C . PASS END=95691616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 95691617 . T . PASS END=95691617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 95691618 . C . PASS END=95691622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95691623 . T . PASS END=95691628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,62,255:19,0 chr2 95691629 . T . PASS END=95691630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95713704 . A . PASS END=95713742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1133:0,84,255:37,0 chr2 95713743 . C . PASS END=95713743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:38,0 chr2 95713744 . T . PASS END=95713744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:87:39:0,87,1404:0,87,255:38,0 chr2 95713745 . G . PASS END=95713747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr2 95713748 . G . PASS END=95713843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:33:0,91,1235:0,91,255:40,0 chr2 95713844 . C . PASS END=95713844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr2 95713845 . G . PASS END=95713851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1208:0,83,255:29,0 chr2 95713852 . A . PASS END=95713853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr2 95713854 . A . PASS END=95713857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 95713858 . C . PASS END=95713871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:27,0 chr2 95715326 . G . PASS END=95715331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr2 95715332 . G . PASS END=95715332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 95715333 . C . PASS END=95715333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr2 95715334 . C . PASS END=95715336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 95715337 . C . PASS END=95715337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:29,0 chr2 95715338 . C . PASS END=95715369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:34,0 chr2 95715370 . C . PASS END=95715371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:33,0 chr2 95715372 . C . PASS END=95715411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1257:0,89,255:38,0 chr2 95715412 . C . PASS END=95715412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1186:0,50,255:32,0 chr2 95715413 . T . PASS END=95715423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1158:0,85,255:34,0 chr2 95715424 . G . PASS END=95715424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr2 95715425 . C . PASS END=95715425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:31,0 chr2 95715426 . A . PASS END=95715426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:30,0 chr2 95715427 . C . PASS END=95715432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 95715433 . T . PASS END=95715433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:28,0 chr2 95715434 . G . PASS END=95715439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1095:0,82,255:30,0 chr2 95715440 . A . PASS END=95715440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:28,0 chr2 95715441 . T . PASS END=95715442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 95715443 . G . PASS END=95715443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 95715444 . C . PASS END=95715444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 95715445 . T . PASS END=95715451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 95719126 . G . PASS END=95719200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,114,1544:0,114,255:40,0 chr2 95753102 . T . PASS END=95753109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 95753110 . C . PASS END=95753110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 95753111 . G . PASS END=95753113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr2 95753114 . T . PASS END=95753114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:23,0 chr2 95753115 . C . PASS END=95753117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,902:0,65,255:26,0 chr2 95753118 . T . PASS END=95753127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr2 95753128 . A . PASS END=95753128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 95753129 . C . PASS END=95753226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:29:0,81,1102:0,81,255:40,0 chr2 95753227 . G . PASS END=95753227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr2 95753228 . C . PASS END=95753232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1404:0,101,255:36,0 chr2 95753233 . G . PASS END=95753233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1380:0,43,255:35,0 chr2 95753234 . G . PASS END=95753234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr2 95753235 . G . PASS END=95753235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 95753236 . G . PASS END=95753237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:66:38:0,66,1138:0,66,255:35,0 chr2 95753238 . G . PASS END=95753238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 95753239 . A . PASS END=95753239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:35,0 chr2 95753240 . C . PASS END=95753241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1357:0,81,255:33,0 chr2 95753242 . C . PASS END=95753242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:35,0 chr2 95753243 . A . PASS END=95753244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 95753245 . C . PASS END=95753245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:35,0 chr2 95753246 . C . PASS END=95753249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:39:0,87,1390:0,87,255:35,0 chr2 95753250 . A . PASS END=95753250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:35,0 chr2 95753251 . T . PASS END=95753251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1221:0,59,255:35,0 chr2 95753252 . G . PASS END=95753253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 95753254 . G . PASS END=95753256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:67:38:0,67,1319:0,67,255:35,0 chr2 95753257 . G . PASS END=95753257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr2 95753258 . A . PASS END=95753258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:31,0 chr2 95753259 . G . PASS END=95753265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1350:0,81,255:31,0 chr2 95753266 . A . PASS END=95753266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:29,0 chr2 95753267 . T . PASS END=95753267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1260:0,101,255:28,0 chr2 95753268 . T . PASS END=95753268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1125:0,50,255:28,0 chr2 95753269 . C . PASS END=95753269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 95753270 . C . PASS END=95753270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:27,0 chr2 95753271 . T . PASS END=95753271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:29,0 chr2 95753272 . C . PASS END=95753272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1086:0,44,255:29,0 chr2 95753273 . C . PASS END=95753275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:30,0 chr2 95753276 . G . PASS END=95753276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 95753277 . A . PASS END=95753277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:29,0 chr2 95753278 . T . PASS END=95753279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 95753280 . T . PASS END=95753280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:27,0 chr2 95753281 . C . PASS END=95753281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:27,0 chr2 95753282 . C . PASS END=95753283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1044:0,57,255:27,0 chr2 95753284 . C . PASS END=95753285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:24,0 chr2 95753286 . A . PASS END=95753286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr2 95753287 . C . PASS END=95753287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,900:0,77,255:20,0 chr2 95753288 . A . PASS END=95753288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,941:0,57,255:20,0 chr2 95753289 . T . PASS END=95753289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 95753290 . G . PASS END=95753291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:28:0,57,855:0,84,255:19,0 chr2 95753292 . A . PASS END=95753292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,908:0,15,255:18,0 chr2 95753293 . G . PASS END=95753318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr2 95753319 . T . PASS END=95753322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 95753323 . T . PASS END=95753323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 95753324 . T . PASS END=95753326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 95756131 . C . PASS END=95756131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr2 95756132 . T . PASS END=95756148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,887:0,72,255:26,0 chr2 95756149 . G . PASS END=95756228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,926:0,81,255:35,0 chr2 95756229 . A . PASS END=95756262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,837:0,66,255:26,0 chr2 95756263 . G . PASS END=95756263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 95756264 . T . PASS END=95756267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 95766219 . C . PASS END=95766281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:99:0,120,1800:0,255,255:40,0 chr2 95766582 . T . PASS END=95766599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:83:0,120,1800:0,178,255:40,0 chr2 95766600 . G . PASS END=95766639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:82:0,120,1800:0,229,255:40,0 chr2 95767422 . T . PASS END=95767468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:88:0,120,1800:0,248,255:40,0 chr2 95770385 . C . PASS END=95770475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:51:0,120,1800:0,135,255:40,0 chr2 95772168 . C . PASS END=95772168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,166,255:40,0 chr2 95772169 . T . PASS END=95772169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,6:68:62:68:0,62,2157:0,62,255:40,0 chr2 95772170 . C . PASS END=95772178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:82:67:0,82,1800:0,82,255:40,0 chr2 95772179 . T . PASS END=95772179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,7:67:19:67:0,19,2031:0,19,255:40,0 chr2 95772180 . G . PASS END=95772184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:93:67:0,93,1800:0,93,255:40,0 chr2 95772185 . C . PASS END=95772185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,7:67:27:67:0,27,2083:0,27,255:40,0 chr2 95772186 . A . PASS END=95772189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 95772190 . T . PASS END=95772190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,7:66:46:66:0,46,2059:0,46,255:40,0 chr2 95772191 . C . PASS END=95772191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,5:66:71:66:0,71,2153:0,71,255:40,0 chr2 95772192 . C . PASS END=95772202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:87:66:0,87,1800:0,87,255:40,0 chr2 95773920 . C . PASS END=95773928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,837:0,66,255:24,0 chr2 95773929 . G . PASS END=95774152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:29:0,82,1058:0,82,255:40,0 chr2 95774153 . C . PASS END=95774153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 95775661 . C . PASS END=95775661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 95775662 . T . PASS END=95775662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 95775663 . T . PASS END=95775665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 95775666 . C . PASS END=95775667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 95775668 . A . PASS END=95775668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 95775669 . A . PASS END=95775786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,986:0,81,255:40,0 chr2 95780811 . A . PASS END=95780819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 95780820 . A . PASS END=95780820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr2 95780821 . G . PASS END=95780823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 95780824 . A . PASS END=95780825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr2 95780826 . T . PASS END=95780826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 95780827 . A . PASS END=95780830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 95780831 . G . PASS END=95780948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:96:40:0,96,1482:0,96,255:40,0 chr2 95783610 . C . PASS END=95783687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:98:38:0,98,1396:0,98,255:40,0 chr2 95783688 . G . PASS END=95783688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:32,0 chr2 95783689 . A . PASS END=95783690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:34,0 chr2 95787479 . C . PASS END=95787486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1119:0,87,255:30,0 chr2 95787487 . C . PASS END=95787507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr2 95787508 . C . PASS END=95787508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 95787509 . A . PASS END=95787515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 95787516 . A . PASS END=95787516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 95787517 . G . PASS END=95787528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr2 95787529 . G . PASS END=95787530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 95787531 . C . PASS END=95787536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 95815027 . T . PASS END=95815040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1199:0,86,255:34,0 chr2 95815041 . T . PASS END=95815041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:33,0 chr2 95815042 . T . PASS END=95815045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1180:0,85,255:34,0 chr2 95815046 . G . PASS END=95815047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:33,0 chr2 95815048 . A . PASS END=95815053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1191:0,89,255:35,0 chr2 95815054 . T . PASS END=95815054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1138:0,66,255:34,0 chr2 95815055 . C . PASS END=95815080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:35:0,81,1219:0,81,255:36,0 chr2 95815081 . A . PASS END=95815081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr2 95815082 . T . PASS END=95815187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:38:0,87,1390:0,87,255:40,0 chr2 95815188 . T . PASS END=95815188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1762:0,79,255:40,0 chr2 95815189 . A . PASS END=95815321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,111,1416:0,111,255:40,0 chr2 95815322 . A . PASS END=95815322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1436:0,77,255:39,0 chr2 95815323 . G . PASS END=95815971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,104,1639:0,104,255:40,0 chr2 95815972 . A . PASS END=95815991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:59:0,105,1575:0,125,255:40,0 chr2 95815992 . A . PASS END=95815992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:58:59:0,58,1771:0,58,255:34,0 chr2 95815993 . T . PASS END=95815995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:58:0,90,1350:0,174,255:32,0 chr2 95815996 . A . PASS END=95815996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:32:58:0,32,1711:0,32,255:29,0 chr2 95815997 . G . PASS END=95816000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:84:53:0,84,1260:0,124,255:30,0 chr2 95816001 . T . PASS END=95816003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:51:51:0,51,765:0,103,255:17,0 chr2 95816004 . T . PASS END=95816004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,7:51:37:51:0,37,1358:0,37,255:14,0 chr2 95816005 . C . PASS END=95816009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:42:47:0,42,630:0,66,255:16,0 chr2 95816010 . A . PASS END=95816012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:36:42:0,36,540:0,91,255:13,0 chr2 95818419 . C . PASS END=95818511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1214:0,83,255:40,0 chr2 95818512 . G . PASS END=95818514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 95818878 . C . PASS END=95819004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:30:0,90,1117:0,90,255:40,0 chr2 95823096 . C . PASS END=95823184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1217:0,84,255:40,0 chr2 95824605 . C . PASS END=95824714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1180:0,86,255:40,0 chr2 95824715 . G . PASS END=95824720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:26,0 chr2 95824721 . G . PASS END=95824728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:26:0,54,810:0,59,255:19,0 chr2 95830776 . C . PASS END=95830780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:86:0,120,1800:0,242,255:40,0 chr2 95830781 . A . PASS END=95830817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:86:0,120,1800:0,193,255:40,0 chr2 95841972 . A . PASS END=95842004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,132,255:40,0 chr2 95843228 . G . PASS END=95843228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 95843229 . A . PASS END=95843229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:25,0 chr2 95843230 . A . PASS END=95843240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:27,0 chr2 95843241 . T . PASS END=95843241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 95843242 . C . PASS END=95843242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 95843243 . G . PASS END=95843244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 95843245 . A . PASS END=95843245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:28,0 chr2 95843246 . G . PASS END=95843306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:31:0,84,1260:0,87,255:40,0 chr2 95843307 . T . PASS END=95843307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1391:0,76,255:40,0 chr2 95843308 . C . PASS END=95843337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1215:0,91,255:40,0 chr2 95843338 . C . PASS END=95843354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,992:0,68,255:26,0 chr2 95845904 . G . PASS END=95846008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,106,1727:0,106,255:40,0 chr2 95846009 . T . PASS END=95846009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:20:49:0,20,1427:0,20,255:36,0 chr2 95846010 . C . PASS END=95846017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:45:0,94,1485:0,94,255:40,0 chr2 95846809 . C . PASS END=95846840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,803:0,72,255:26,0 chr2 95846841 . G . PASS END=95846880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1141:0,80,255:33,0 chr2 95846881 . C . PASS END=95846887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr2 95846888 . A . PASS END=95846889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 95846890 . A . PASS END=95846898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 95846899 . G . PASS END=95846927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr2 95846928 . A . PASS END=95846928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:27,0 chr2 95846929 . G . PASS END=95846942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1180:0,93,255:32,0 chr2 95846943 . A . PASS END=95846943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr2 95846944 . A . PASS END=95846993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:33:0,83,1152:0,83,255:38,0 chr2 95846994 . C . PASS END=95847021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:42:38:0,42,630:0,88,255:19,0 chr2 95847022 . T . PASS END=95847027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:30:40:0,30,450:0,120,255:13,0 chr2 95847028 . G . PASS END=95847032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:24:40:0,24,360:0,110,255:9,0 chr2 95847033 . A . PASS END=95847034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:15:39:0,15,225:0,117,255:6,0 chr2 95847035 . A . LowGQ END=95847039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:39,0:39:0:38:0,0,0:0,114,255:3,0 chr2 95847040 . TGCG T, 161.35 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,18,0:0,20,0:111:193,114,0,1380,114,1380:255,0,2:0,49:1.6135e+02,1.1135e+02,0.0000e+00,4.5000e+02,1.4612e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,18,20:0,0,14,24 chr2 95847044 . G . LowGQ END=95847044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,35:38:0:38:0,0,0:255,0,2:32,0 chr2 95847045 . C . PASS END=95847046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr2 95847047 . G . LowGQ END=95847047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:0:38:0,0,1188:2,0,255:32,0 chr2 95847048 . C . PASS END=95847048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr2 95847049 . G . PASS END=95847049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 95847050 . A . PASS END=95847050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:30,0 chr2 95847051 . C . PASS END=95847090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1305:0,98,255:40,0 chr2 95847091 . A . PASS END=95847684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:36:0,84,1260:0,85,255:40,0 chr2 95847685 . A . PASS END=95847685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,0 chr2 95847686 . A . PASS END=95847854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:37:0,93,1224:0,97,255:40,0 chr2 95873564 . A . PASS END=95873568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95873569 . A . PASS END=95873569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 95873570 . C . PASS END=95873572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 95873573 . G . PASS END=95873573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,729:0,35,255:21,0 chr2 95873574 . A . PASS END=95873574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 95873575 . G . PASS END=95873575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 95873576 . G . PASS END=95873582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,762:0,66,255:23,0 chr2 95874396 . G . PASS END=95874484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,102,1530:0,117,255:40,0 chr2 95877366 . G . PASS END=95877394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1274:0,92,255:39,0 chr2 95877395 . T . PASS END=95877395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1091:0,67,255:36,0 chr2 95877396 . C . PASS END=95877456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1186:0,86,255:39,0 chr2 95877457 . T . PASS END=95877468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:32:0,65,1035:0,65,255:24,0 chr2 95877941 . G . PASS END=95878030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,123,255:40,0 chr2 95880084 . A . PASS END=95880750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:28:0,81,1055:0,81,255:40,1 chr2 95880751 . T . PASS END=95880751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 95880752 . C . PASS END=95881351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:84:30:0,84,1260:0,88,255:40,0 chr2 95924824 . G . PASS END=95924892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1798:0,120,255:40,0 chr2 95940334 . A . PASS END=95940338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 95940339 . G . PASS END=95940339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 95940340 . C . PASS END=95940370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr2 95940371 . G . PASS END=95940371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 95940372 . C . PASS END=95940386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 95940387 . G . PASS END=95940395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 95940396 . T . PASS END=95940398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 95940399 . G . PASS END=95940399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 95940400 . C . PASS END=95940401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 95940402 . G . PASS END=95940402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 95940403 . G . PASS END=95940406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 95940407 . C . PASS END=95940407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr2 95940408 . A . PASS END=95940417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 95940418 . G . PASS END=95940423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr2 95940424 . A . PASS END=95940424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 95940425 . A . PASS END=95940438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,451:0,36,255:13,0 chr2 95940439 . G . PASS END=95940447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:18,0 chr2 95940448 . C . PASS END=95940449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 95940450 . G . PASS END=95940457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,635:0,40,255:18,0 chr2 95940458 . C . PASS END=95940458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr2 95940459 . C . PASS END=95940459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 95940460 . C . PASS END=95940460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 95940461 . C . PASS END=95940463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr2 95940464 . C . PASS END=95940464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 95940465 . A . PASS END=95940490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:19,0 chr2 95940491 . G . PASS END=95940491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:17,0 chr2 95940492 . A . PASS END=95940504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,658:0,41,255:19,0 chr2 95940505 . G . PASS END=95940505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr2 95940506 . G . PASS END=95940509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 95940510 . C . PASS END=95940510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:17,0 chr2 95940511 . C . PASS END=95940511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 95940512 . T . PASS END=95940512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr2 95940513 . G . PASS END=95940517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,692:0,44,255:19,0 chr2 95940518 . C . PASS END=95940518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 95940519 . C . PASS END=95940519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr2 95940520 . C . PASS END=95940522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 95940523 . T . PASS END=95940533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 95940534 . G . PASS END=95940534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 95940535 . C . PASS END=95940535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 95940536 . G . PASS END=95940539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr2 95940540 . C . PASS END=95940541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 95940542 . T . PASS END=95940543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95940544 . C . PASS END=95940544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 95940545 . T . PASS END=95940550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 95940551 . T . PASS END=95940577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,615:0,41,255:19,0 chr2 95941209 . A . PASS END=95941258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:33:0,91,1203:0,91,255:37,0 chr2 95941617 . G . PASS END=95941621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 95941622 . A . PASS END=95941631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 95941632 . G . PASS END=95941639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 95941640 . G . PASS END=95941640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 95941641 . G . PASS END=95941643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 95941644 . T . PASS END=95941645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 95941646 . G . PASS END=95941650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 95941651 . A . PASS END=95941654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,1083:0,60,255:26,0 chr2 95941655 . C . PASS END=95941697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1049:0,86,255:37,0 chr2 95941698 . C . PASS END=95941698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:33,0 chr2 95941699 . T . PASS END=95941861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:36:0,87,1296:0,87,255:40,0 chr2 95941862 . T . PASS END=95941862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:33,0 chr2 95941863 . G . PASS END=95941870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1349:0,95,255:34,0 chr2 95941871 . T . PASS END=95941871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1311:0,62,255:35,0 chr2 95941872 . C . PASS END=95941872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 95941873 . T . PASS END=95941873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1304:0,70,255:34,0 chr2 95941874 . T . PASS END=95941880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1304:0,94,255:35,0 chr2 95941975 . G . PASS END=95942078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1162:0,83,255:37,0 chr2 95942079 . T . PASS END=95942079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1017:0,66,255:28,0 chr2 95942080 . C . PASS END=95942093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1164:0,93,255:31,0 chr2 95942094 . A . PASS END=95942094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 95942095 . A . PASS END=95942095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 95942342 . G . PASS END=95942342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 95942343 . A . PASS END=95942344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 95942345 . C . PASS END=95942349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 95942350 . G . PASS END=95942350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 95942351 . G . PASS END=95942352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 95942353 . C . PASS END=95942353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:26,0 chr2 95942354 . G . PASS END=95942358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr2 95942359 . A . PASS END=95942360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 95942361 . A . PASS END=95942365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 95942366 . T . PASS END=95942366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 95942367 . T . PASS END=95942371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 95942372 . C . PASS END=95942372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 95942373 . T . PASS END=95942380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr2 95942381 . G . PASS END=95942381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:27,0 chr2 95942382 . A . PASS END=95942387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 95942388 . T . PASS END=95942389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr2 95942390 . T . PASS END=95942393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 95942394 . A . PASS END=95942394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 95942395 . G . PASS END=95942395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 95942396 . G . PASS END=95942396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 95942397 . A . PASS END=95942405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 95942720 . G . PASS END=95942720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 95942721 . T . PASS END=95942721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:35,0 chr2 95942722 . G . PASS END=95942809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:37:0,84,1289:0,84,255:40,0 chr2 95943112 . T . PASS END=95943118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 95943119 . G . PASS END=95943124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:25,0 chr2 95943125 . C . PASS END=95943129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 95943130 . A . PASS END=95943130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 95943131 . C . PASS END=95943140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr2 95943141 . A . PASS END=95943141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1054:0,79,255:31,0 chr2 95943142 . C . PASS END=95943165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1101:0,80,255:35,0 chr2 95943166 . T . PASS END=95943166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:34,0 chr2 95943167 . G . PASS END=95943173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1319:0,105,255:38,0 chr2 95943174 . G . PASS END=95943174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1316:0,59,255:36,0 chr2 95943175 . G . PASS END=95943243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1215:0,83,255:38,0 chr2 95943244 . G . PASS END=95943246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 95943247 . G . PASS END=95943249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 95943250 . A . PASS END=95943253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 95943254 . A . PASS END=95943257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 95943258 . T . PASS END=95943270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,900:0,74,255:26,0 chr2 95943271 . T . PASS END=95943271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr2 95943272 . G . PASS END=95943284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 95943285 . A . PASS END=95943285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 95943286 . C . PASS END=95943287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:20,0 chr2 95943288 . C . PASS END=95943314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 95943678 . G . PASS END=95943678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 95943679 . T . PASS END=95943679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 95943680 . G . PASS END=95943680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 95943681 . C . PASS END=95943681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 95943682 . C . PASS END=95943682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 95943683 . C . PASS END=95943686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr2 95943687 . G . PASS END=95943687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 95943688 . T . PASS END=95943688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 95943689 . G . PASS END=95943689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 95943690 . G . PASS END=95943691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 95943692 . C . PASS END=95943693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr2 95943694 . A . PASS END=95943696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr2 95943697 . T . PASS END=95943697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 95943698 . C . PASS END=95943698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 95943699 . C . PASS END=95943699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr2 95943700 . T . PASS END=95943700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 95943701 . G . PASS END=95943703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:27,0 chr2 95943704 . C . PASS END=95943704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 95943705 . C . PASS END=95943707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:27,0 chr2 95943708 . C . PASS END=95943709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 95943710 . A . PASS END=95943714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1033:0,73,255:27,0 chr2 95943715 . G . PASS END=95943719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 95943720 . C . PASS END=95943720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 95943721 . C . PASS END=95943723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 95943724 . A . PASS END=95943724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 95943725 . G . PASS END=95943725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 95943726 . G . PASS END=95943741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,909:0,62,255:26,0 chr2 95943742 . T . PASS END=95943752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,56,255:18,0 chr2 95944469 . G . PASS END=95944526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1195:0,96,255:35,0 chr2 95944527 . T . PASS END=95944529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 95944530 . A . PASS END=95944530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:25,0 chr2 95944531 . A . PASS END=95944532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,1069:0,60,255:25,0 chr2 95944733 . A . PASS END=95944734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:23,0 chr2 95944735 . C . PASS END=95944737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:26,0 chr2 95944738 . A . PASS END=95944738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr2 95944739 . A . PASS END=95944739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:25,0 chr2 95944740 . G . PASS END=95944741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,867:0,31,255:25,0 chr2 95944742 . A . PASS END=95944742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 95944743 . G . PASS END=95944744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:28:0,45,986:0,45,255:29,0 chr2 95944745 . C . PASS END=95944745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 95944746 . A . PASS END=95944746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 95944747 . G . PASS END=95944747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr2 95944748 . T . PASS END=95944754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1125:0,93,255:31,0 chr2 95944755 . G . PASS END=95944759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 95944760 . C . PASS END=95944777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr2 95944778 . T . PASS END=95944780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr2 95944781 . C . PASS END=95944789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,83,255:30,0 chr2 95944790 . T . PASS END=95944790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:29,0 chr2 95944791 . C . PASS END=95944793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1163:0,90,255:30,0 chr2 95944794 . G . PASS END=95944794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 95944795 . G . PASS END=95944813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:32,0 chr2 95944814 . G . PASS END=95944814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1127:0,65,255:29,0 chr2 95944815 . C . PASS END=95944821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:30,0 chr2 95944822 . C . PASS END=95944822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 95944823 . A . PASS END=95944830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1078:0,87,255:29,0 chr2 95944831 . C . PASS END=95944833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1039:0,71,255:25,0 chr2 95944834 . G . PASS END=95944834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 95944835 . A . PASS END=95944835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 95944836 . G . PASS END=95944837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 95944838 . T . PASS END=95944842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr2 95944843 . G . PASS END=95944843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:23,0 chr2 95944844 . A . PASS END=95944858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,931:0,64,255:25,0 chr2 95944859 . A . PASS END=95944859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:22,0 chr2 95944860 . C . LowGQ END=95944860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:0:30:0,0,930:18,0,255:20,0 chr2 95944861 . C . PASS END=95944861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,889:0,24,255:19,0 chr2 95944862 . T . LowGQ END=95944862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,859:21,0,255:19,0 chr2 95944863 . G . PASS END=95944863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,835:0,21,255:19,0 chr2 95944864 . C . LowGQ END=95944865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:28:0,0,759:0,0,255:19,0 chr2 95944866 . G . PASS END=95944866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 95944867 . G . LowGQ END=95944868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:27:0,0,697:5,0,255:19,0 chr2 95944869 . G . PASS END=95944869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:22,0 chr2 95944870 . G . LowGQ END=95944875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,645:2,0,255:19,0 chr2 95944876 . A . PASS END=95944876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,787:0,15,255:15,0 chr2 95944877 . G . LowGQ END=95944877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,6:27:0:27:0,0,671:41,0,255:13,0 chr2 95944878 . A . PASS END=95944878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,763:0,48,255:17,0 chr2 95944879 . T . LowGQ END=95944880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,704:10,0,255:15,0 chr2 95944881 . C . PASS END=95944881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:12:26:0,12,749:0,12,255:13,0 chr2 95944882 . G . LowGQ END=95944885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,6:26:0:25:0,0,551:27,0,255:11,0 chr2 95944886 . C . PASS END=95944886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,627:0,16,255:5,0 chr2 95944887 . C . LowGQ END=95944891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,6:23:0:23:0,0,482:28,0,255:3,0 chr2 95944892 . G . PASS END=95944892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:18:23:0,18,270:0,69,255:6,0 chr2 95945593 . G . PASS END=95945605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:22,0 chr2 95945606 . T . PASS END=95945666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,815:0,66,255:25,0 chr2 95945667 . G . PASS END=95945669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr2 95945670 . T . PASS END=95945700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 95945701 . C . PASS END=95945720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 95945721 . A . PASS END=95945728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 95945729 . G . PASS END=95945731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:14:0,26,405:0,26,255:9,0 chr2 95945732 . C . PASS END=95945745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,419:0,36,255:12,0 chr2 95946742 . G . PASS END=95946754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr2 95946755 . G . PASS END=95946759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 95946760 . G . PASS END=95946760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 95946761 . G . PASS END=95946769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 95946770 . A . PASS END=95946772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 95946773 . G . PASS END=95946776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 95946777 . G . PASS END=95946784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 95946990 . A . PASS END=95947012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,884:0,72,255:26,0 chr2 95947013 . T . PASS END=95947018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 95947019 . C . PASS END=95947019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 95947020 . A . PASS END=95947025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 95947026 . C . PASS END=95947027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 95947028 . T . PASS END=95947034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 95947035 . G . PASS END=95947035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 95947036 . G . PASS END=95947047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 95947048 . T . PASS END=95947052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1163:0,90,255:30,0 chr2 95947053 . G . PASS END=95947053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 95947054 . G . PASS END=95947072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr2 95947073 . C . PASS END=95947076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1053:0,71,255:26,0 chr2 95947077 . G . PASS END=95947077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:24,0 chr2 95947078 . G . PASS END=95947084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,978:0,67,255:25,0 chr2 95947085 . A G, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,7,0:0,20,0:78:166,81,0,1044,81,1044:255,84,0:0,0:1.2826e+02,7.8262e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,14:0,0,17,10 chr2 95947086 . G . PASS END=95947088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:24,0 chr2 95947089 . C . PASS END=95947089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:23,0 chr2 95947090 . T . PASS END=95947099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,839:0,69,255:24,0 chr2 95947100 . G . PASS END=95947100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:23,0 chr2 95947101 . C . PASS END=95947104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 95947105 . C . PASS END=95947105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:20,0 chr2 95947106 . T . PASS END=95947106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 95947107 . C . PASS END=95947107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 95947108 . T . PASS END=95947109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 95947110 . T . PASS END=95947113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 95947673 . T . PASS END=95947673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,104,1110:0,104,255:35,0 chr2 95947674 . T . PASS END=95947674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr2 95947675 . T . PASS END=95947676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 95947677 . C . PASS END=95947677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:31,0 chr2 95947678 . A . PASS END=95947764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:89:35:0,89,1233:0,89,255:40,0 chr2 95947890 . G . PASS END=95947892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 95947893 . G . PASS END=95947898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 95947899 . G . PASS END=95947899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:26,0 chr2 95947900 . G . PASS END=95947906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr2 95947907 . C . PASS END=95947907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 95947908 . A . PASS END=95947938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1072:0,87,255:39,0 chr2 95947939 . T . PASS END=95947939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1319:0,70,255:34,0 chr2 95947940 . C . PASS END=95947948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1394:0,98,255:36,0 chr2 95947949 . T . PASS END=95947949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:32,0 chr2 95947950 . G . PASS END=95947964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1119:0,82,255:32,0 chr2 95947965 . T . PASS END=95947965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:28,0 chr2 95947966 . A . PASS END=95947967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 95947968 . C . PASS END=95947968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 95947969 . A . PASS END=95947973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 95947974 . G . PASS END=95947974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 95950717 . T . PASS END=95950717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 95950718 . A . PASS END=95950718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 95950719 . T . PASS END=95950719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 95950720 . A . PASS END=95950738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:31,0 chr2 95950739 . A . PASS END=95950739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr2 95950740 . G . PASS END=95950788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:32,0 chr2 95950789 . G . PASS END=95950789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 95950790 . C . PASS END=95950797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 95950798 . C . PASS END=95950800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 95950801 . G . PASS END=95950819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 95950820 . G . PASS END=95950851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:23:0,62,914:0,62,255:26,0 chr2 95950852 . T . PASS END=95950852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 95950853 . T . PASS END=95950853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 95950854 . C . PASS END=95950860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr2 95950861 . C . PASS END=95950863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 95951387 . A . PASS END=95951444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,847:0,69,255:26,0 chr2 95951445 . T . PASS END=95951456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:17,0 chr2 95951457 . A . PASS END=95951457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 95951458 . A . PASS END=95951458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 95952227 . G . PASS END=95952228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,552:0,48,255:16,0 chr2 95952229 . C . PASS END=95952229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 95952230 . A . PASS END=95952235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,590:0,40,255:19,0 chr2 95952236 . G . PASS END=95952240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 95952241 . G . PASS END=95952242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 95952243 . G . PASS END=95952248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:20,0 chr2 95952249 . G . PASS END=95952249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 95952250 . G . PASS END=95952251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 95952252 . T . PASS END=95952252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr2 95952253 . G . PASS END=95952265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:22,0 chr2 95952266 . C . PASS END=95952269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,784:0,52,255:20,0 chr2 95952270 . G . PASS END=95952292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:22,0 chr2 95952293 . A . PASS END=95952294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 95952295 . G . PASS END=95952296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 95952297 . T . PASS END=95952297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 95952298 . C . PASS END=95952305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,786:0,66,255:22,0 chr2 95952306 . A . PASS END=95952306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 95952307 . G . PASS END=95952311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 95952312 . G . PASS END=95952312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,676:0,19,255:20,0 chr2 95952313 . C . PASS END=95952314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr2 95952315 . T . PASS END=95952316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 95952317 . G . PASS END=95952319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 95952552 . G . PASS END=95952603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,100,1291:0,100,255:39,0 chr2 95952604 . A . PASS END=95952605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 95952881 . C . PASS END=95952895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,862:0,61,255:26,0 chr2 95952896 . G . PASS END=95952901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 95952902 . G . PASS END=95952902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 95952903 . C . PASS END=95952905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 95952906 . A . PASS END=95952907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr2 95952908 . G . PASS END=95952908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 95952909 . T . PASS END=95952909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr2 95952910 . C . PASS END=95952918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 95952919 . G . PASS END=95952919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 95952920 . A . PASS END=95952921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 95952922 . A . PASS END=95952922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1052:0,74,255:26,0 chr2 95952923 . G . PASS END=95952925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 95952926 . G . PASS END=95952926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:26,0 chr2 95952927 . A . PASS END=95952930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 95952931 . G . PASS END=95952931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 95952932 . C . PASS END=95952933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 95952934 . T . PASS END=95952949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,1008:0,68,255:26,0 chr2 95952950 . A . PASS END=95952952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 95952953 . C . PASS END=95952961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr2 95953144 . G . PASS END=95953153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1341:0,95,255:36,0 chr2 95953154 . G . PASS END=95953154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 95953155 . T . PASS END=95953203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:33:0,88,1182:0,88,255:37,0 chr2 95953204 . A . PASS END=95953204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1044:0,79,255:28,0 chr2 95953205 . G . PASS END=95953205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 95953206 . A . PASS END=95953206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1052:0,79,255:28,0 chr2 95953207 . G . PASS END=95953207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 95953208 . A . PASS END=95953212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 95953959 . G . PASS END=95954048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,126,255:40,2 chr2 95954231 . A . PASS END=95954337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,102,1530:0,123,255:40,0 chr2 95954681 . C . PASS END=95954744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,114,1764:0,114,255:40,0 chr2 95963187 . A . PASS END=95963187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:19,0 chr2 95963188 . T . PASS END=95963188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:20,0 chr2 95963189 . G . PASS END=95963189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 95963190 . C . PASS END=95963190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,721:0,17,255:18,0 chr2 95963191 . A . PASS END=95963191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:19,0 chr2 95963192 . G . PASS END=95963192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 95963193 . C . PASS END=95963193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 95963194 . C . PASS END=95963194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,706:0,19,255:17,0 chr2 95963195 . G . PASS END=95963199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr2 95963200 . A . PASS END=95963200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:17,0 chr2 95963201 . G . PASS END=95963201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 95975970 . A . PASS END=95975984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1133:0,82,255:33,0 chr2 95976103 . G . PASS END=95976104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1039:0,41,255:30,0 chr2 95976105 . A . PASS END=95976108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 95976109 . A . PASS END=95976113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:41:32:0,41,1033:0,41,255:31,0 chr2 95976114 . G . PASS END=95976115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1186:0,61,255:33,0 chr2 95976116 . C . PASS END=95976116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1272:0,102,255:34,0 chr2 95976117 . G . PASS END=95976118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr2 95976119 . C . PASS END=95976119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:34,0 chr2 95976120 . G . PASS END=95976121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1180:0,63,255:34,0 chr2 95976122 . A . PASS END=95976122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:33,0 chr2 95976123 . C . PASS END=95976123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:34,0 chr2 95976124 . G . PASS END=95976124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1349:0,105,255:35,0 chr2 95976125 . G . PASS END=95976128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:34,0 chr2 95976129 . C . PASS END=95976213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:36:0,83,1536:0,83,255:40,0 chr2 95976214 . A . PASS END=95976214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:52:46:0,52,1565:0,52,255:37,0 chr2 95976215 . T . PASS END=95976243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:83:42:0,83,1440:0,83,255:40,0 chr2 95976244 . T . PASS END=95976244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1347:0,60,255:28,0 chr2 95976245 . C . PASS END=95976245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:42:0,96,1440:0,126,255:32,0 chr2 95976246 . C . PASS END=95976247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,99,1485:0,107,255:33,0 chr2 95976248 . G . PASS END=95976248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1324:0,57,255:25,0 chr2 95976249 . C . PASS END=95976251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:41:0,90,1350:0,106,255:30,0 chr2 95976252 . A . PASS END=95976252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1057:0,55,255:26,0 chr2 95976253 . G . PASS END=95976253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:19:35:0,19,1035:0,19,255:26,0 chr2 95976254 . C . PASS END=95976258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,85,255:29,0 chr2 95976259 . C . PASS END=95976259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:14:34:0,14,984:0,14,255:24,0 chr2 95976260 . A . LowGQ END=95976260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,7:34:0:34:0,0,887:14,0,255:21,0 chr2 95976261 . G . PASS END=95976263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr2 95976264 . C . LowGQ END=95976264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,792:16,0,255:22,0 chr2 95976265 . T . PASS END=95976265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,969:0,54,255:24,0 chr2 95976266 . C . LowGQ END=95976267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,700:10,0,255:21,0 chr2 95976268 . G . PASS END=95976268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 96012768 . A . PASS END=96012768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 96012769 . T . PASS END=96012780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr2 96012781 . G . PASS END=96012782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 96012783 . A . PASS END=96012783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr2 96012784 . T . PASS END=96012797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:24,0 chr2 96012798 . A . PASS END=96012798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 96012799 . T . PASS END=96012828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr2 96012829 . T . PASS END=96012829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:23,0 chr2 96012830 . C . PASS END=96012834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 96012835 . A . PASS END=96012835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 96012836 . G . PASS END=96012851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr2 96012852 . G . PASS END=96012854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 96012855 . C . PASS END=96012855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 96012856 . C . PASS END=96012869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,53,255:19,0 chr2 96012870 . G . PASS END=96012870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 96040044 . A . PASS END=96040146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1131:0,81,255:40,0 chr2 96040147 . T . PASS END=96040147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1143:0,72,255:28,0 chr2 96040148 . C . PASS END=96040152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:28,0 chr2 96040153 . C . PASS END=96040168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:25,0 chr2 96040596 . G . PASS END=96040665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:38:0,85,1360:0,85,255:40,0 chr2 96040886 . A . PASS END=96040922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1119:0,83,255:36,0 chr2 96040923 . T . PASS END=96040923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:34,0 chr2 96040924 . G . PASS END=96040956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1156:0,83,255:36,0 chr2 96047344 . G . PASS END=96047346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 96047347 . T . PASS END=96047347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,949:0,74,255:32,0 chr2 96047348 . T . PASS END=96047451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:85:34:0,85,1152:0,85,255:40,0 chr2 96048125 . G . PASS END=96048125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 96048126 . A . PASS END=96048127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 96048128 . A . PASS END=96048128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 96048129 . T . PASS END=96048148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 96048149 . A . PASS END=96048149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 96048150 . T . PASS END=96048150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 96048151 . C . PASS END=96048162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 96048163 . G . PASS END=96048176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr2 96048177 . A . PASS END=96048177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 96048178 . C . PASS END=96048221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,390:0,33,255:12,0 chr2 96048222 . T . PASS END=96048229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 96048980 . A . PASS END=96049042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1333:0,87,255:40,0 chr2 96049750 . G . PASS END=96049785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1111:0,83,255:37,0 chr2 96049786 . A . PASS END=96049786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1173:0,78,255:35,0 chr2 96049787 . A . PASS END=96049797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1333:0,95,255:36,0 chr2 96071307 . A . PASS END=96071330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1149:0,82,255:34,0 chr2 96071331 . T . PASS END=96071331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr2 96071332 . T . PASS END=96071547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1371:0,81,255:40,0 chr2 96071548 . G . PASS END=96071551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:36:0,75,1125:0,108,255:26,0 chr2 96072689 . A . PASS END=96072690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 96072691 . C . PASS END=96072702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:29,0 chr2 96072703 . A . PASS END=96072703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 96072704 . G . PASS END=96072705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 96072706 . T . PASS END=96072706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 96072707 . G . PASS END=96072905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:86:29:0,86,1072:0,86,255:40,0 chr2 96076275 . G . PASS END=96076334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,188,255:40,0 chr2 96076612 . G . PASS END=96076635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 96076636 . G . PASS END=96076636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 96076637 . C . PASS END=96076650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:32,0 chr2 96076651 . G . PASS END=96076651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:29,0 chr2 96076652 . C . PASS END=96076664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1227:0,89,255:33,0 chr2 96076665 . T . PASS END=96076665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:31,0 chr2 96076666 . G . PASS END=96076676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1286:0,92,255:37,0 chr2 96076677 . G . PASS END=96076677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr2 96076678 . C . PASS END=96076714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1221:0,94,255:37,0 chr2 96076715 . A . PASS END=96076715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:31,0 chr2 96076716 . A . PASS END=96076753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,987:0,84,255:36,0 chr2 96076754 . T . PASS END=96076755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 96076756 . A . PASS END=96076758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 96076759 . A . PASS END=96076770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr2 96076771 . G . PASS END=96076774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr2 96078182 . A . PASS END=96078294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,137,255:40,0 chr2 96078425 . G . PASS END=96078512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,114,1710:0,115,255:40,0 chr2 96078643 . A . PASS END=96078705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,174,255:40,0 chr2 96079714 . G . PASS END=96079793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,127,255:40,0 chr2 96079932 . G . PASS END=96079980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,187,255:40,0 chr2 96080030 . G . PASS END=96080087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,122,255:40,0 chr2 96142912 . T . LowDepth;LowGQ END=96143393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96145134 . C . LowDepth;LowGQ END=96145156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96146053 . C . PASS END=96146283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,120,1800:0,147,255:40,0 chr2 96147343 . C . PASS END=96147438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:77:0,120,1800:0,204,255:40,0 chr2 96148052 . C . PASS END=96148054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 96148055 . G . PASS END=96148063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:28,0 chr2 96148064 . A . PASS END=96148064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 96148065 . G . PASS END=96148077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 96148078 . T . PASS END=96148078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 96148079 . G . PASS END=96148101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1111:0,87,255:31,0 chr2 96148102 . G . PASS END=96148102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr2 96148103 . C . PASS END=96148112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1103:0,83,255:31,0 chr2 96148113 . T . PASS END=96148113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1066:0,69,255:30,0 chr2 96148114 . T . PASS END=96148114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 96148115 . G . PASS END=96148115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr2 96148116 . G . PASS END=96148118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:31,0 chr2 96148119 . C . PASS END=96148119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:31,0 chr2 96148120 . A . PASS END=96148120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:30,0 chr2 96148121 . C . PASS END=96148121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr2 96148122 . A . PASS END=96148136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1103:0,82,255:33,0 chr2 96148137 . C . PASS END=96148138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:29,0 chr2 96148139 . C . PASS END=96148139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:29,0 chr2 96148140 . T . PASS END=96148140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:29,0 chr2 96148141 . T . PASS END=96148143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:30,0 chr2 96148144 . C . PASS END=96148144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1177:0,47,255:28,0 chr2 96148145 . C . PASS END=96148146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:30,0 chr2 96148147 . T . PASS END=96148148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1084:0,74,255:28,0 chr2 96148149 . T . PASS END=96148149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 96148150 . C . PASS END=96148150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 96148151 . A . PASS END=96148151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96148152 . C . PASS END=96148152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr2 96148153 . A . PASS END=96148153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96148154 . G . PASS END=96148154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 96148155 . A . PASS END=96148156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96148157 . C . PASS END=96148162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,984:0,60,255:27,0 chr2 96148163 . C . PASS END=96148163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:26,0 chr2 96148164 . T . PASS END=96148166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr2 96148167 . G . PASS END=96148167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr2 96148168 . T . PASS END=96148170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 96148171 . G . PASS END=96148171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:23,0 chr2 96148172 . C . PASS END=96148174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:24,0 chr2 96148175 . A . PASS END=96148175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:22,0 chr2 96148176 . T . PASS END=96148176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 96148177 . G . PASS END=96148177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:23,0 chr2 96148178 . G . PASS END=96148184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,900:0,62,255:24,0 chr2 96148185 . C . PASS END=96148185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:22,0 chr2 96148186 . A . PASS END=96148188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,862:0,61,255:22,0 chr2 96148189 . T . PASS END=96148189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,776:0,23,255:20,0 chr2 96148190 . T . PASS END=96148195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:21,0 chr2 96148196 . C . PASS END=96148198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:21,0 chr2 96148199 . A . PASS END=96148199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 96148200 . G . PASS END=96148200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 96148201 . A . PASS END=96148204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,929:0,62,255:24,0 chr2 96148205 . C . PASS END=96148205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 96148206 . A . PASS END=96148206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 96148207 . G . PASS END=96148207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 96148208 . G . PASS END=96148211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:23,0 chr2 96148212 . T . PASS END=96148212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,817:0,48,255:21,0 chr2 96148213 . G . PASS END=96148235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:24,0 chr2 96148236 . A . PASS END=96148237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,745:0,49,255:21,0 chr2 96148238 . G . PASS END=96148238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr2 96148239 . G . PASS END=96148247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 96148248 . T . PASS END=96148249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 96148250 . C . PASS END=96148252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96148253 . C . PASS END=96148259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,654:0,46,255:19,0 chr2 96148260 . A . PASS END=96148260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96148261 . T . PASS END=96148274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,721:0,47,255:19,0 chr2 96148275 . T . PASS END=96148281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr2 96148282 . T . PASS END=96148282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 96148283 . C . PASS END=96148283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 96148284 . G . PASS END=96148284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 96148285 . G . PASS END=96148285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 96148286 . T . PASS END=96148286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 96148287 . G . PASS END=96148295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr2 96148296 . C . PASS END=96148296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:22,0 chr2 96148297 . T . PASS END=96148301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr2 96148302 . G . PASS END=96148318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,792:0,80,255:28,0 chr2 96148319 . A . PASS END=96148319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:30,0 chr2 96148320 . C . PASS END=96148331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,998:0,93,255:31,0 chr2 96148332 . T . PASS END=96148332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 96148333 . C . PASS END=96148455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1040:0,86,255:40,0 chr2 96148456 . A . PASS END=96148466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,976:0,68,255:26,0 chr2 96149034 . C . PASS END=96149059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:78:0,120,1800:0,212,255:40,0 chr2 96259772 . A . PASS END=96259773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 96259774 . G . PASS END=96259774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 96259775 . G . PASS END=96259908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:31:0,86,1305:0,86,255:40,0 chr2 96259909 . C . PASS END=96259923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:29:0,69,1035:0,79,255:25,0 chr2 96259924 . C . PASS END=96259925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 96259926 . G . PASS END=96259940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:21,0 chr2 96259941 . A . PASS END=96259959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,645:0,43,255:19,0 chr2 96259960 . C . PASS END=96259971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 96259972 . T . PASS END=96259995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,605:0,40,255:19,0 chr2 96259996 . C . PASS END=96259996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:13,0 chr2 96259997 . A . PASS END=96259997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 96259998 . T . PASS END=96260007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,629:0,40,255:19,0 chr2 96260008 . A . PASS END=96260008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 96260009 . G . PASS END=96260009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 96260010 . C . PASS END=96260012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 96260013 . G . PASS END=96260014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 96260015 . C . PASS END=96260021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96260022 . A . PASS END=96260022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,737:0,35,255:19,0 chr2 96260023 . A . PASS END=96260026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,893:0,66,255:26,0 chr2 96260027 . C . PASS END=96260037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:30,0 chr2 96260038 . G . PASS END=96260038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr2 96260039 . A . PASS END=96260182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:31:0,87,1126:0,92,255:40,0 chr2 96260798 . G . PASS END=96260893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:71:0,120,1800:0,157,255:40,0 chr2 96261950 . G . PASS END=96262180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:42:0,117,1755:0,125,255:40,0 chr2 96263077 . G . LowDepth;LowGQ END=96263099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96263628 . G . LowDepth;LowGQ END=96263725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96264840 . T . LowDepth;LowGQ END=96264998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96264999 . A . LowDepth END=96265072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:3,0 chr2 96265073 . A . PASS END=96265140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:5,0 chr2 96265141 . C . LowGQ END=96265141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 96265142 . A . PASS END=96265164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,139:0,12,139:4,0 chr2 96265165 . C . LowGQ END=96265165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:27,0,104:3,0 chr2 96265166 . A . PASS END=96265196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr2 96265197 . T . LowGQ END=96265197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:4,0 chr2 96265198 . T . PASS END=96265205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr2 96265206 . T . LowGQ END=96265206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 96265207 . T . PASS END=96265207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr2 96265208 . G . LowGQ END=96265208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 96265209 . A . PASS END=96265212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,178:4,0 chr2 96265213 . T . PASS END=96265257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,94:3,0 chr2 96265258 . G . PASS END=96265321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr2 96516920 . C . PASS END=96516943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:99:0,120,1800:0,255,255:40,0 chr2 96517442 . C . PASS END=96517535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,138,255:40,0 chr2 96517874 . T . PASS END=96517944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:52:0,120,1800:0,144,255:40,0 chr2 96519457 . T . PASS END=96519609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:36:0,87,1305:0,102,255:40,0 chr2 96521014 . T . PASS END=96521085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:87:74:0,87,1800:0,87,255:40,0 chr2 96521086 . T . PASS END=96521086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,7:97:41:97:0,41,2824:0,41,255:40,0 chr2 96521087 . T . PASS END=96521088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:81:97:0,81,1800:0,81,255:40,0 chr2 96521089 . A . PASS END=96521089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,7:98:46:98:0,46,3241:0,46,255:40,0 chr2 96521090 . T . PASS END=96521091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:97:0,120,1800:0,255,255:40,0 chr2 96521092 . G . PASS END=96521093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,7:98:45:97:0,45,3136:0,45,255:40,0 chr2 96521094 . C . PASS END=96521094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,6:96:64:96:0,64,3190:0,64,255:40,0 chr2 96521095 . T . PASS END=96521095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,6:96:56:96:0,56,3151:0,56,255:40,0 chr2 96521096 . T . PASS END=96521100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:96:0,120,1800:0,255,255:40,0 chr2 96521101 . T . PASS END=96521106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:99:0,120,1800:0,255,255:40,0 chr2 96521107 . G . LowGQ END=96521107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,11:107:0:107:0,0,3269:57,0,255:40,0 chr2 96521108 . A . PASS END=96521137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,1:135:99:111:0,120,1800:0,255,255:40,0 chr2 96521138 . T C, 33.73 PASS DP=163;MQ=67.93;MQRankSum=-9.063;ReadPosRankSum=-3.389;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:98,63,0:0.391,0.000:161:52,29,0:46,34,0:34:69,0,47,2208,3283,5491:255,0,255:40,0:3.3735e+01,1.8782e-03,5.0352e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:58,40,58,5:56,42,30,33 chr2 96521139 . T . PASS END=96521153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:188,1:189:99:164:0,120,1800:0,255,255:40,0 chr2 96521154 . C G, 14.93 PASS DP=207;MQ=58.30;MQRankSum=-3.290;ReadPosRankSum=-2.009;FractionInformativeReads=0.995;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:162,44,0:0.214,0.000:206:82,23,0:80,21,0:15:50,0,44,150,150,150:255,0,255:40,0:1.4933e+01,1.4184e-01,4.7492e+01,1.4970e+02,1.8447e+02,1.5271e+02:0.00,34.77,37.78,34.77,69.54,37.78:113,49,38,6:85,77,21,23 chr2 96521155 . A . PASS END=96521219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:250,0:250:99:209:0,120,1800:0,255,255:40,0 chr2 96521220 . G A, 22.59 PASS DP=263;MQ=39.73;MQRankSum=-4.766;ReadPosRankSum=3.232;FractionInformativeReads=0.992;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:186,75,0:0.287,0.000:261:104,32,0:82,43,0:23:57,0,45,2638,6553,9191:255,0,255:40,0:2.2586e+01,2.4073e-02,4.8474e+01,4.5000e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:105,81,39,36:95,91,50,25 chr2 96521221 . T . PASS END=96521296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:248,0:248:99:224:0,120,1800:0,242,255:40,0 chr2 96521297 . T C, 33.34 PASS DP=230;MQ=35.25;MQRankSum=-5.647;ReadPosRankSum=-1.590;FractionInformativeReads=0.991;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:102,126,0:0.553,0.000:228:57,61,0:45,65,0:33:68,0,42,4392,3431,7823:255,0,255:40,0:3.3335e+01,2.1576e-03,4.4843e+01,4.4853e+02,4.4853e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:36,66,30,96:47,55,61,65 chr2 96521298 . T . PASS END=96521323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:150,2:152:99:148:0,120,1800:0,255,255:40,0 chr2 96521324 . A G, 30.75 PASS DP=147;MQ=37.60;MQRankSum=-5.913;ReadPosRankSum=-3.735;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:84,61,0:0.421,0.000:145:47,31,0:37,30,0:31:66,0,43,2003,2840,4843:255,0,255:40,0:3.0749e+01,3.7683e-03,4.5879e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,56,10,51:37,47,32,29:96521324 chr2 96521325 . T . PASS END=96521333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:146,0:146:99:144:0,120,1800:0,255,255:40,0 chr2 96521334 . T . LowGQ END=96521334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,24:144:0:144:0,0,3472:255,0,255:40,0 chr2 96521335 . T . PASS END=96521335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:134,2:136:99:136:0,120,1800:0,255,255:40,0 chr2 96521336 . T C, 12.33 PASS DP=135;MQ=39.32;MQRankSum=-5.652;ReadPosRankSum=-2.964;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:85,50,0:0.370,0.000:135:48,25,0:37,25,0:12:47,0,41,147,147,147:255,0,255:40,0:1.2330e+01,2.6190e-01,4.4012e+01,1.4710e+02,1.8187e+02,1.5011e+02:0.00,34.77,37.78,34.77,69.54,37.78:32,53,2,48:43,42,25,25:96521324 chr2 96521337 . G . PASS END=96521377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:82:0,120,1800:0,236,255:40,0 chr2 96521378 . A . PASS END=96521437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:49:0,108,1620:0,117,255:40,0 chr2 96521438 . A . PASS END=96521438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1784:0,79,255:36,0 chr2 96521439 . A . PASS END=96521448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:90:43:0,90,1515:0,90,255:40,1 chr2 96521449 . A . PASS END=96521449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:38,0 chr2 96521450 . G . PASS END=96521928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:31:0,81,1141:0,89,255:40,0 chr2 96523057 . C . PASS END=96523084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,147,255:40,0 chr2 96523085 . A . PASS END=96523240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:75:0,120,1800:0,209,255:40,0 chr2 96525609 . C . PASS END=96525639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,163,255:40,0 chr2 96525640 . G . PASS END=96525640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,5:75:32:75:0,32,2450:0,32,255:40,0 chr2 96525641 . T . PASS END=96525651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:75:0,120,1800:0,215,255:40,0 chr2 96525652 . T . PASS END=96525652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,5:82:61:82:0,61,2654:0,61,255:40,0 chr2 96525653 . T . PASS END=96525658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,246,255:40,0 chr2 96525659 . C . PASS END=96525659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,5:83:55:83:0,55,2584:0,55,255:40,0 chr2 96525660 . G . PASS END=96525677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:83:0,120,1800:0,203,255:40,0 chr2 96525678 . T . PASS END=96525822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:66:0,120,1800:0,162,255:40,0 chr2 96533188 . C . PASS END=96533188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 96533189 . T . PASS END=96533189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr2 96533190 . T . PASS END=96533193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 96533194 . A . PASS END=96533194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr2 96533195 . C . PASS END=96533196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 96533197 . T . PASS END=96533214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 96533215 . T . PASS END=96533216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 96533217 . A . PASS END=96533229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 96533230 . T . PASS END=96533230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr2 96533231 . C . PASS END=96533247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,599:0,48,255:19,0 chr2 96533248 . G . PASS END=96533252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 96533253 . T . PASS END=96533253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr2 96533254 . C . PASS END=96533257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:22,0 chr2 96533258 . G . PASS END=96533278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,50,255:19,0 chr2 96533279 . T . PASS END=96533279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:17,0 chr2 96533280 . G . PASS END=96533314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr2 96533315 . T . PASS END=96533315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 96533316 . A . PASS END=96533317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 96533318 . T . PASS END=96533318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 96533319 . T . PASS END=96533329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 96542187 . C . PASS END=96542260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:99:0,120,1800:0,255,255:40,0 chr2 96546175 . C . PASS END=96546247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:85:0,120,1800:0,230,255:40,0 chr2 96546343 . C . PASS END=96546371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,144,255:40,0 chr2 96548050 . C . PASS END=96548122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:95:0,120,1800:0,234,255:40,0 chr2 96548217 . C . PASS END=96548245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,209,255:40,0 chr2 96550088 . C . PASS END=96550116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1358:0,103,255:40,0 chr2 96551964 . C . PASS END=96551992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,255,255:40,0 chr2 96553684 . T . PASS END=96553745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:77:0,120,1800:0,219,255:40,0 chr2 96553840 . C . PASS END=96553868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,146,255:40,0 chr2 96555547 . C . PASS END=96555619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:35:0,86,1291:0,86,255:39,0 chr2 96555714 . C . PASS END=96555742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,113,1345:0,113,255:40,0 chr2 96557413 . C . PASS END=96557485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,117,1726:0,117,255:40,0 chr2 96557580 . C . PASS END=96557608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,175,255:40,0 chr2 96559281 . C . PASS END=96559289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:40:0,112,1491:0,112,255:40,0 chr2 96559290 . A . PASS END=96559290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1299:0,79,255:40,0 chr2 96559291 . T . PASS END=96559341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:43:0,99,1543:0,99,255:40,0 chr2 96559342 . G . PASS END=96559342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1443:0,60,255:37,0 chr2 96559343 . T . PASS END=96559353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,99,1485:0,123,255:40,0 chr2 96559444 . C . PASS END=96559453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,100,1320:0,100,255:38,0 chr2 96559454 . G . PASS END=96559454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr2 96559455 . G . PASS END=96559472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1410:0,98,255:37,0 chr2 96561147 . C . PASS END=96561147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 96561148 . T . PASS END=96561148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 96561149 . G . PASS END=96561179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 96561180 . T . PASS END=96561180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:9,0 chr2 96561181 . G . PASS END=96561188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:10,0 chr2 96561189 . T . PASS END=96561219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 96561310 . C . PASS END=96561330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 96561331 . A . PASS END=96561331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 96561332 . G . PASS END=96561338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr2 96563018 . C . PASS END=96563090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,134,255:40,0 chr2 96563185 . C . PASS END=96563213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:86:0,120,1800:0,254,255:40,0 chr2 96564893 . C . LowGQ END=96564965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,1:2:0:2:0,0,0:0,0,11:3,0 chr2 96565056 . C . LowDepth;LowGQ END=96565084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:1,0 chr2 96566763 . C . LowGQ END=96566835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,1:3:0:3:0,0,39:0,0,46:3,0 chr2 96566926 . C . PASS END=96566954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr2 96568634 . C . PASS END=96568706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,146,255:40,0 chr2 96568801 . C . PASS END=96568829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,219,255:40,0 chr2 96570509 . C . LowDepth;LowGQ END=96570581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96570672 . C . LowDepth;LowGQ END=96570700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96572379 . C . LowGQ END=96572451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:3:0,0,0:0,9,86:3,0 chr2 96572542 . C . PASS END=96572570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr2 96574250 . C . PASS END=96574322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,133,255:40,0 chr2 96574417 . C . PASS END=96574445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:64:0,120,1800:0,149,255:40,2 chr2 96576121 . C . PASS END=96576193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1008:0,81,255:38,0 chr2 96576288 . C . PASS END=96576316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:38:0,98,1313:0,98,255:40,0 chr2 96577992 . C . PASS END=96577992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 96577993 . T . PASS END=96577993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr2 96577994 . G . PASS END=96578064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:34:0,90,1256:0,90,255:40,0 chr2 96578155 . C . PASS END=96578183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,134,255:40,0 chr2 96579856 . C . PASS END=96579928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:35:0,96,1297:0,96,255:40,0 chr2 96580023 . C . PASS END=96580051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,113,1800:0,113,255:40,0 chr2 96581728 . C . PASS END=96581800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1169:0,87,255:40,0 chr2 96581891 . C . PASS END=96581919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,99,1585:0,99,255:40,0 chr2 96583603 . C . PASS END=96583626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,826:0,62,255:28,0 chr2 96583627 . T . PASS END=96583649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 96583650 . A . PASS END=96583660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr2 96583661 . C . PASS END=96583662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 96583663 . C . PASS END=96583666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:28,0 chr2 96583667 . A . PASS END=96583667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,978:0,35,255:23,0 chr2 96583668 . G . PASS END=96583675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 96585481 . C . PASS END=96585481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 96585482 . T . PASS END=96585482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,934:0,37,255:29,0 chr2 96585483 . G . PASS END=96585484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1097:0,96,255:32,0 chr2 96585485 . C . PASS END=96585485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,947:0,46,255:29,0 chr2 96585486 . T . PASS END=96585486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr2 96585487 . C . PASS END=96585487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,978:0,46,255:29,0 chr2 96585488 . A . PASS END=96585488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr2 96585489 . G . PASS END=96585490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,985:0,63,255:31,0 chr2 96585491 . T . PASS END=96585491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:31,0 chr2 96585492 . T . PASS END=96585492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1156:0,96,255:32,0 chr2 96585493 . T . PASS END=96585493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 96585494 . T . PASS END=96585495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1189:0,96,255:34,0 chr2 96585496 . C . LowGQ END=96585496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,6:34:0:34:0,0,859:20,0,255:28,0 chr2 96585497 . T . PASS END=96585497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1178:0,86,255:33,0 chr2 96585498 . C . PASS END=96585498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:22:35:0,22,982:0,22,255:30,0 chr2 96585499 . C . PASS END=96585500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 96585501 . T . PASS END=96585501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1041:0,55,255:29,0 chr2 96585502 . C . PASS END=96585502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1083:0,39,255:29,0 chr2 96585503 . C . PASS END=96585503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 96585504 . T . PASS END=96585504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1121:0,60,255:31,0 chr2 96585505 . T . PASS END=96585510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,91,255:32,0 chr2 96585511 . C . LowGQ END=96585511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,7:36:0:36:0,0,875:59,0,255:28,0 chr2 96585512 . T . PASS END=96585512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:28:36:0,28,1086:0,28,255:28,0 chr2 96585513 . G . PASS END=96585513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1125:0,36,255:29,0 chr2 96585514 . T . PASS END=96585514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 96585515 . G . PASS END=96585515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:28:36:0,28,1108:0,28,255:31,0 chr2 96585516 . G . PASS END=96585520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1191:0,91,255:33,0 chr2 96585521 . A . PASS END=96585521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1225:0,78,255:33,0 chr2 96585522 . T . PASS END=96585523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:34,0 chr2 96585524 . C . PASS END=96585524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr2 96585525 . A . PASS END=96585530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1181:0,88,255:33,0 chr2 96585531 . G . PASS END=96585531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:30,0 chr2 96585532 . A . PASS END=96585533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:31,0 chr2 96585534 . T . PASS END=96585534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1117:0,72,255:30,0 chr2 96585535 . C . PASS END=96585537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:31,0 chr2 96585538 . C . PASS END=96585538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:30,0 chr2 96585539 . C . PASS END=96585553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:32:0,93,1303:0,95,255:36,0 chr2 96587355 . C . PASS END=96587427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:51:0,119,1800:0,119,255:40,0 chr2 96587530 . C . PASS END=96587542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:31,0 chr2 96587543 . T . PASS END=96587544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr2 96587545 . T . PASS END=96587548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 96587549 . T . PASS END=96587558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1061:0,71,255:26,0 chr2 96589059 . C . PASS END=96589133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,189,255:40,0 chr2 96589409 . C . PASS END=96589437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,137,255:40,0 chr2 96591100 . C . PASS END=96591172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,2:110:99:105:0,120,1800:0,225,255:40,0 chr2 96591267 . C . PASS END=96591295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:91:0,120,1800:0,255,255:40,0 chr2 96593010 . C . PASS END=96593034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:36:0,104,1413:0,104,255:40,0 chr2 96593129 . C . PASS END=96593157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,146,255:40,0 chr2 96601202 . C . PASS END=96601204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr2 96601205 . T . PASS END=96601205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:29,0 chr2 96601206 . T . PASS END=96601218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:31,0 chr2 96601219 . G . PASS END=96601219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:30,0 chr2 96601220 . A . PASS END=96601220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1061:0,85,255:29,0 chr2 96601221 . A . PASS END=96601221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,937:0,19,255:27,0 chr2 96601222 . T . PASS END=96601274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1117:0,89,255:35,0 chr2 96601364 . C . PASS END=96601392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,121,255:40,0 chr2 96604577 . C . PASS END=96604578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1250:0,102,255:34,0 chr2 96604579 . T . PASS END=96604579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr2 96604580 . C . PASS END=96604649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1147:0,80,255:37,0 chr2 96604735 . C . PASS END=96604735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 96604736 . G . PASS END=96604741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 96604742 . A . PASS END=96604742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 96604743 . A . PASS END=96604763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,931:0,62,255:26,0 chr2 96606908 . C . PASS END=96606947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:93:0,120,1800:0,225,255:40,0 chr2 96610375 . C . PASS END=96610442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:82:0,120,1800:0,177,255:40,0 chr2 96610862 . A . PASS END=96610922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,136,255:40,0 chr2 96614278 . C . PASS END=96614344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:41:0,89,1440:0,89,255:40,0 chr2 96616497 . C . PASS END=96616527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:110:0,120,1800:0,255,255:40,0 chr2 96617096 . C . PASS END=96617101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,4:121:99:110:0,119,1800:0,119,255:40,0 chr2 96617102 . C . PASS END=96617102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,12:130:79:130:0,79,3735:0,79,255:40,0 chr2 96617103 . T . PASS END=96617156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:129,0:129:92:117:0,92,1800:0,92,255:40,0 chr2 96619687 . C . PASS END=96619753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1225:0,89,255:40,0 chr2 96624390 . A . PASS END=96624411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,184,255:40,1 chr2 96624505 . C . PASS END=96624530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:53:0,120,1800:0,143,255:40,0 chr2 96624531 . A . PASS END=96624533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,126,255:40,0 chr2 96643870 . C . PASS END=96643937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,148,255:40,0 chr2 96646396 . A . PASS END=96646533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,99,1485:0,115,255:40,0 chr2 96648004 . C . PASS END=96648110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,101,1513:0,101,255:40,0 chr2 96652493 . C . PASS END=96652672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:31:0,87,1305:0,91,255:40,0 chr2 96652840 . C . PASS END=96652864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,119,1667:0,119,255:40,0 chr2 96652865 . C . PASS END=96652954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1194:0,86,255:40,0 chr2 96657260 . C . PASS END=96657405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:35:0,90,1283:0,95,255:40,0 chr2 96657406 . G . PASS END=96657406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:29,0 chr2 96657407 . C . PASS END=96657412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:31,0 chr2 96657413 . C . PASS END=96657423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,77,255:21,0 chr2 96657424 . G . PASS END=96657448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,720:0,45,255:19,0 chr2 96657449 . T . PASS END=96657450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96657451 . A . PASS END=96657456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,713:0,47,255:18,0 chr2 96679370 . A . PASS END=96679371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96679372 . G . PASS END=96679372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 96679373 . G . PASS END=96679374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:27,2 chr2 96679375 . G . PASS END=96679381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 96679382 . G . PASS END=96679382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 96679383 . C . PASS END=96679395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1019:0,87,255:38,0 chr2 96679396 . A . PASS END=96679396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr2 96679397 . G . PASS END=96679719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:39:0,92,1369:0,92,255:40,0 chr2 96680857 . A . PASS END=96680919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,115,1800:0,115,255:40,1 chr2 96680920 . A . PASS END=96680920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,5:55:68:55:0,68,1593:0,68,255:40,0 chr2 96680921 . T . PASS END=96681020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:32:0,85,978:0,85,255:40,0 chr2 96681021 . C . PASS END=96681021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr2 96681022 . C . PASS END=96681073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1117:0,90,255:36,0 chr2 96684949 . G . PASS END=96685008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:99:81:0,120,1800:0,213,255:40,0 chr2 96685229 . G . PASS END=96685285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:35:0,90,1327:0,90,255:40,0 chr2 96687907 . C . PASS END=96687908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 96687909 . A . PASS END=96687909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 96687910 . G . PASS END=96687911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 96687912 . T . PASS END=96687912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 96687913 . A . PASS END=96687931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1109:0,90,255:32,0 chr2 96687932 . A . PASS END=96687932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr2 96687933 . A . PASS END=96687937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr2 96687938 . T . PASS END=96687938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:31,0 chr2 96687939 . C . PASS END=96687953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1065:0,80,255:32,0 chr2 96687954 . T . PASS END=96687954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr2 96687955 . G . PASS END=96687966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:31,0 chr2 96687967 . A . PASS END=96687967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 96687968 . A . PASS END=96687971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 96687972 . T . PASS END=96687973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1024:0,71,255:28,0 chr2 96687974 . G . PASS END=96687975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 96687976 . G . PASS END=96687980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 96687981 . G . PASS END=96687989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 96687990 . T . PASS END=96688013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:24:0,68,984:0,68,255:26,0 chr2 96688014 . G . PASS END=96688014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:21,0 chr2 96688015 . C . PASS END=96688023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 96688416 . C . PASS END=96688471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,119,1800:0,119,255:40,0 chr2 96688628 . T . PASS END=96688771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:66:0,120,1800:0,182,255:40,1 chr2 96688854 . C . PASS END=96688875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,86,255:30,0 chr2 96688876 . G . PASS END=96688876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 96688877 . C . PASS END=96688889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 96688890 . C . PASS END=96688901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,68,255:26,0 chr2 96688902 . A . PASS END=96688928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,47,255:19,0 chr2 96688929 . G . PASS END=96688929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr2 96688930 . G . PASS END=96688930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 96688931 . C . PASS END=96688942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,635:0,41,255:17,0 chr2 96688943 . A . PASS END=96688943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 96688944 . A . PASS END=96688948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:17,0 chr2 96688949 . T . PASS END=96688950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 96688951 . T . PASS END=96688955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr2 96688956 . A . PASS END=96688971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:13:0,36,496:0,39,255:13,0 chr2 96688972 . G . PASS END=96688974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 96689057 . C . PASS END=96689188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:37:0,95,1301:0,95,255:40,0 chr2 96689671 . C . PASS END=96689699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1272:0,92,255:36,0 chr2 96689700 . T . PASS END=96689700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:31,0 chr2 96689701 . G . PASS END=96689701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 96689702 . A . PASS END=96689702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:30,0 chr2 96689703 . G . PASS END=96689741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1141:0,80,255:33,0 chr2 96689742 . G . PASS END=96689742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 96689743 . G . PASS END=96689743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 96689744 . C . PASS END=96689744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:26,0 chr2 96689745 . A . PASS END=96689745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,984:0,32,255:25,0 chr2 96689746 . G . PASS END=96689747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 96689748 . G . PASS END=96689748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 96689937 . C . PASS END=96689937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 96689938 . T . PASS END=96689941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr2 96689942 . G . PASS END=96689951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,840:0,72,255:24,0 chr2 96689952 . G . PASS END=96689952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 96689953 . T . PASS END=96689953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,758:0,72,255:24,0 chr2 96689954 . C . PASS END=96689954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 96689955 . T . PASS END=96689957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 96689958 . C . PASS END=96689958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 96689959 . G . PASS END=96689959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 96689960 . G . PASS END=96689960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 96689961 . C . PASS END=96689963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 96689964 . C . PASS END=96689964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 96689965 . A . PASS END=96689968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr2 96689969 . G . PASS END=96689970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,815:0,41,255:23,0 chr2 96689971 . A . PASS END=96689973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 96689974 . A . PASS END=96689974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:22,0 chr2 96689975 . G . PASS END=96689985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,939:0,72,255:26,0 chr2 96689986 . T . PASS END=96689993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 96689994 . C . PASS END=96690008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,939:0,64,255:25,0 chr2 96690009 . C . PASS END=96690009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 96690010 . A . PASS END=96690023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,886:0,75,255:25,0 chr2 96690024 . C . PASS END=96690024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 96690025 . T . PASS END=96690027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 96690028 . A . PASS END=96690035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 96690036 . G . PASS END=96690041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:20,0 chr2 96690042 . C . PASS END=96690075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,629:0,40,255:18,0 chr2 96690076 . A . PASS END=96690083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,38,255:13,0 chr2 96690084 . G . PASS END=96690085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 96690175 . C . PASS END=96690205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,902:0,69,255:26,0 chr2 96690206 . C . PASS END=96690208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1124:0,87,255:29,0 chr2 96690209 . C . PASS END=96690209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 96690210 . T . PASS END=96690212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 96690213 . G . PASS END=96690213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 96690214 . C . PASS END=96690265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1247:0,86,255:37,0 chr2 96690266 . C . PASS END=96690266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:30,0 chr2 96690267 . A . PASS END=96690289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:34:0,90,1288:0,92,255:35,0 chr2 96690290 . C . PASS END=96690290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:29,0 chr2 96690291 . A . PASS END=96690302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1233:0,89,255:32,0 chr2 96690303 . G . PASS END=96690303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:27,0 chr2 96690304 . C . PASS END=96690304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 96690305 . C . PASS END=96690305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:28,0 chr2 96690306 . C . PASS END=96690313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:35:0,90,1258:0,91,255:36,0 chr2 96690314 . G . PASS END=96690314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr2 96690315 . C . PASS END=96690315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1263:0,50,255:31,0 chr2 96690316 . T . PASS END=96690433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:38:0,87,1308:0,87,255:40,0 chr2 96690521 . C . PASS END=96690536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1133:0,80,255:32,0 chr2 96690537 . A . PASS END=96690538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1086:0,69,255:31,0 chr2 96690539 . C . PASS END=96690555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1201:0,86,255:33,0 chr2 96690556 . T . PASS END=96690556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:30,0 chr2 96690557 . G . PASS END=96690557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 96690558 . G . PASS END=96690558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:30,0 chr2 96690559 . C . PASS END=96690561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 96690562 . T . PASS END=96690562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr2 96690563 . G . PASS END=96690569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr2 96690570 . A . PASS END=96690570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr2 96690571 . C . PASS END=96690571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 96690572 . C . PASS END=96690573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 96690574 . C . PASS END=96690574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 96690575 . A . LowGQ END=96690575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,747:4,0,255:22,0 chr2 96690576 . G . PASS END=96690584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:28:0,63,945:0,71,255:26,0 chr2 96690585 . A . PASS END=96690587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,68,255:19,0 chr2 96690588 . C . PASS END=96690591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr2 96691233 . C . PASS END=96691235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:17,0 chr2 96691236 . T . PASS END=96691236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr2 96691237 . C . PASS END=96691239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 96691240 . G . PASS END=96691240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 96691241 . A . PASS END=96691248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 96691249 . G . PASS END=96691249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 96691250 . C . PASS END=96691251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 96691252 . C . PASS END=96691262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 96691263 . C . PASS END=96691309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,612:0,48,255:19,0 chr2 96691310 . G . PASS END=96691325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr2 96691326 . C . PASS END=96691326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 96691327 . C . PASS END=96691345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr2 96691346 . G . LowGQ END=96691346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr2 96691347 . C . PASS END=96691348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 96691349 . G . PASS END=96691349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr2 96691350 . T . PASS END=96691351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 96691678 . C . PASS END=96691710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,861:0,66,255:24,0 chr2 96691711 . T . PASS END=96691711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 96691712 . C . PASS END=96691718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr2 96691719 . C . PASS END=96691726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 96691727 . C . PASS END=96691749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr2 96691750 . A . PASS END=96691750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 96691751 . C . PASS END=96691751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:18,0 chr2 96691752 . G . PASS END=96691760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:23:0,56,855:0,56,255:19,0 chr2 96691931 . C . PASS END=96691961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,107,1496:0,107,255:40,0 chr2 96691962 . C . PASS END=96691962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1442:0,76,255:39,0 chr2 96691963 . G . PASS END=96692024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,95,255:40,0 chr2 96692025 . C . PASS END=96692032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,77,255:22,0 chr2 96692033 . C . PASS END=96692053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,53,255:19,0 chr2 96692445 . A . LowDepth;LowGQ END=96692657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96692755 . C . LowDepth;LowGQ END=96692854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96693167 . C . LowDepth;LowGQ END=96693300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96693739 . T . LowDepth;LowGQ END=96693838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96696154 . C . PASS END=96696232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr2 96696233 . G . PASS END=96696245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 96696246 . G . PASS END=96696282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr2 96696492 . C . PASS END=96696537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 96696538 . T . PASS END=96696569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,139:0,12,139:4,0 chr2 96696570 . A . PASS END=96696596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 96697009 . C . LowDepth;LowGQ END=96697082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 96697781 . C . PASS END=96697850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,560:0,45,255:17,0 chr2 96697851 . A . PASS END=96697889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,427:0,33,255:13,0 chr2 96697890 . C . PASS END=96697892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 96697893 . G . PASS END=96697894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 96698045 . C . PASS END=96698051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 96698052 . C . PASS END=96698052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 96698053 . C . PASS END=96698057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 96698058 . G . PASS END=96698058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 96698059 . G . PASS END=96698059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 96698060 . G . PASS END=96698060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 96698061 . C . PASS END=96698073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr2 96698074 . G . PASS END=96698074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 96698075 . A . PASS END=96698087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr2 96698088 . C . PASS END=96698088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 96698089 . C . PASS END=96698092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 96698093 . C . PASS END=96698093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 96698094 . A . PASS END=96698101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 96698102 . G . PASS END=96698107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 96780545 . T . PASS END=96780545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:22,0 chr2 96780546 . C . PASS END=96780548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 96780549 . C . PASS END=96780549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 96780550 . A . PASS END=96780564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,884:0,62,255:25,0 chr2 96780565 . A . PASS END=96780565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:24,0 chr2 96780566 . C . PASS END=96780573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr2 96780574 . A . PASS END=96780574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr2 96780575 . C . PASS END=96780581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,77,255:29,0 chr2 96780582 . C . PASS END=96780678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1103:0,80,255:37,0 chr2 96780679 . G . PASS END=96780715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1426:0,96,255:40,0 chr2 96780716 . T G, 167.39 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,22,0:0,18,0:117:205,120,0,1542,120,1542:255,107,0:1,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,17:0,0,17,23 chr2 96780717 . C . PASS END=96780753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:40:0,93,1457:0,93,255:40,0 chr2 96780754 . G . PASS END=96780893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,94,255:40,0 chr2 96780894 . A . PASS END=96780894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:26,0 chr2 96780895 . C . PASS END=96780917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1119:0,80,255:31,0 chr2 96780918 . A . PASS END=96780918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 96780919 . G . PASS END=96780920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 96780921 . G . PASS END=96780937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,900:0,82,255:26,0 chr2 96780938 . G . PASS END=96780943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:48:33:0,48,720:0,99,255:19,0 chr2 96780944 . A . PASS END=96780947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:42:33:0,42,630:0,98,255:18,0 chr2 96780948 . A . PASS END=96780948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,999:0,39,255:13,0 chr2 96780949 . C . PASS END=96780952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:42:35:0,42,630:0,105,255:14,0 chr2 96780953 . C . PASS END=96780960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:30:31:0,30,450:0,77,255:13,0 chr2 96780961 . G . PASS END=96780961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:24:31:0,24,360:0,93,255:8,0 chr2 96780962 . G . PASS END=96780969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:15:30:0,15,270:0,15,255:6,0 chr2 96780970 . A . LowGQ END=96780970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:0:31:0,0,907:1,0,255:3,1 chr2 96780971 . C . PASS END=96780973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:15:30:0,15,225:0,76,255:6,0 chr2 96780974 . T . LowGQ END=96780974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,875:35,0,255:0,1 chr2 96780975 . T . PASS END=96780985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:12:28:0,12,180:0,52,255:5,0 chr2 96780986 . C CTCCTCCTCT, 128.13 PASS DP=28;MQ=246.45;FractionInformativeReads=0.964 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,13,0:0,14,0:78:150,81,0,1206,81,1206:255,0,141:0,25:1.2813e+02,7.8132e+01,0.0000e+00,4.5000e+02,1.1304e+02,4.5000e+02:0.00,19.00,22.00,34.77,53.77,37.77:0,0,9,18:0,0,15,12 chr2 96780987 . T . LowGQ END=96780987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:12,16:28:0:28:0,0,0:255,0,255:21,0 chr2 96780988 . C . PASS END=96780994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:22,0 chr2 96780995 . T . PASS END=96780996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,872:0,42,255:22,1 chr2 96780997 . C . PASS END=96780997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 96780998 . A . LowGQ END=96780999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:27:0,0,690:52,0,255:23,0 chr2 96781000 . C . PASS END=96781000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 96781001 . T . LowGQ END=96781001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,699:63,0,255:23,0 chr2 96781002 . T . PASS END=96781003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,915:0,67,255:23,0 chr2 96781004 . A . LowGQ END=96781004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,753:71,0,255:23,0 chr2 96781005 . T . PASS END=96781006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 96781007 . C . LowGQ END=96781008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,747:68,0,255:24,0 chr2 96781009 . C . PASS END=96781010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,917:0,67,255:24,0 chr2 96781011 . G . PASS END=96781011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,953:0,10,255:25,0 chr2 96781012 . G . PASS END=96781024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,917:0,65,255:25,0 chr2 96781025 . A . PASS END=96781025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:22,0 chr2 96781026 . A . PASS END=96781029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 96781030 . C . PASS END=96781038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 96781039 . G . PASS END=96781039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 96781040 . G . PASS END=96781043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr2 96781044 . T . PASS END=96781044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 96781045 . G . PASS END=96781047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 96781048 . C . PASS END=96781074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:18,0 chr2 96781075 . G . PASS END=96781075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 96781076 . T . PASS END=96781105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,437:0,39,255:13,0 chr2 96781106 . G . PASS END=96781131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 96781132 . T . PASS END=96781148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 96781149 . T . PASS END=96781150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 96781151 . G . PASS END=96781164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 96781165 . A . PASS END=96781165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr2 96781166 . A . PASS END=96781178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,421:0,39,255:13,0 chr2 96781179 . A . PASS END=96781179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 96781180 . G . PASS END=96781187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 96781188 . A . PASS END=96781188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 96781189 . G . PASS END=96781190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 96781191 . T . PASS END=96781191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 96781192 . T . PASS END=96781219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 96781220 . G . PASS END=96781240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 96781241 . A . PASS END=96781241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 96781242 . C . PASS END=96781256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 96781257 . C G, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.700;ReadPosRankSum=0.849;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,9,0:0.692,0.000:13:2,5,0:2,4,0:46:85,0,46,293,143,436:255,0,116:4,0:5.0000e+01,9.8627e-05,4.8964e+01,2.9308e+02,1.7780e+02,4.3899e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,6,3:3,1,6,3 chr2 96781258 . C . PASS END=96781294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,413:0,33,255:13,0 chr2 96781295 . G . PASS END=96781296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr2 96781297 . T . PASS END=96781297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 96781298 . C . PASS END=96781313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,418:0,33,255:12,0 chr2 96781314 . T . PASS END=96781314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 96781315 . A . PASS END=96781315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 96781316 . G . PASS END=96781334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:17,0 chr2 96781335 . C . PASS END=96781335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 96781336 . A . PASS END=96781344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 96781345 . A . PASS END=96781345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr2 96781346 . G . PASS END=96781346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,0 chr2 96781347 . A . PASS END=96781347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 96781348 . A . PASS END=96781348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr2 96781349 . A . PASS END=96781363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr2 96781364 . G . PASS END=96781364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 96781365 . G . PASS END=96781368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 96781369 . G . PASS END=96781369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 96781370 . G . PASS END=96781395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 96781396 . T . PASS END=96781428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr2 96781429 . G . PASS END=96781431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 96781432 . C . PASS END=96781434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 96781435 . C . PASS END=96781441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:8,0 chr2 96781442 . G . PASS END=96781474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,358:0,30,255:13,0 chr2 96781475 . G . PASS END=96781478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 96781479 . C . PASS END=96781482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 96781483 . C . PASS END=96781526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,617:0,48,255:19,0 chr2 96781527 . T . PASS END=96781539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 96781540 . C . PASS END=96781570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:18:0,47,690:0,47,255:19,0 chr2 96781571 . G . PASS END=96781571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 96781572 . A . PASS END=96781578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 96781579 . A . PASS END=96781579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr2 96781580 . C . PASS END=96781603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr2 96781604 . G . PASS END=96781619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,807:0,66,255:22,0 chr2 96781620 . G . PASS END=96781644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,613:0,41,255:19,0 chr2 96781645 . G . PASS END=96781648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:22,0 chr2 96781649 . G . PASS END=96781649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 96781650 . A . PASS END=96781668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:22,0 chr2 96781669 . G . PASS END=96781669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 96781670 . C . PASS END=96781671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 96781672 . C . PASS END=96781672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:21,0 chr2 96781673 . G . PASS END=96781673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 96781674 . T . PASS END=96781675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,827:0,42,255:23,0 chr2 96781676 . G . PASS END=96781680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 96781681 . G . PASS END=96781681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 96781682 . C . PASS END=96781712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 96781713 . A . PASS END=96781714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 96781715 . G . PASS END=96781728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr2 96781729 . G . PASS END=96781729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 96781730 . C . PASS END=96781742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,801:0,69,255:23,0 chr2 96781743 . A . PASS END=96781743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 96781744 . G . PASS END=96781757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:23,0 chr2 96781758 . C . PASS END=96781758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:20,0 chr2 96781759 . G . PASS END=96781768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 96781769 . G . PASS END=96781771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr2 96781772 . G . PASS END=96781790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 96781791 . A . PASS END=96781791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 96781792 . C . PASS END=96781814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,906:0,62,255:25,0 chr2 96781815 . A . PASS END=96781815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:22,0 chr2 96781816 . A . PASS END=96781820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 96781821 . A . PASS END=96781821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 96781822 . T . PASS END=96781827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,908:0,72,255:24,0 chr2 96781828 . A . PASS END=96781828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 96781829 . G . PASS END=96781829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 96781830 . G . PASS END=96781830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 96781831 . T . PASS END=96781837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 96781838 . C . PASS END=96781840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,814:0,53,255:19,0 chr2 96781841 . C . PASS END=96781843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 96781844 . T . PASS END=96781851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,814:0,53,255:19,0 chr2 96781852 . C . PASS END=96781858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96781859 . C . PASS END=96781859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 96781860 . T . PASS END=96781863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 96781864 . C . PASS END=96781877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:18,0 chr2 96781878 . T . PASS END=96781878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr2 96781879 . G . PASS END=96781880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 96781881 . T . PASS END=96781886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 96781887 . A . PASS END=96781888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 96789589 . T . PASS END=96789597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:26,0 chr2 96789598 . G . PASS END=96789598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:26,0 chr2 96789599 . G . PASS END=96789610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr2 96789611 . A . PASS END=96789611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 96789612 . A . PASS END=96789612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:26,0 chr2 96789613 . A . PASS END=96789615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 96789616 . A . PASS END=96789616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 96789617 . T . PASS END=96789617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,931:0,45,255:27,0 chr2 96789618 . T . PASS END=96789618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 96789619 . T . PASS END=96789619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,960:0,53,255:27,0 chr2 96789620 . C . PASS END=96789620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 96789621 . T . PASS END=96789623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 96789624 . G . PASS END=96789624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 96789625 . T . PASS END=96789625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 96789626 . A . PASS END=96789629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 96789630 . A . PASS END=96789644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1094:0,77,255:26,0 chr2 96789645 . C . PASS END=96789648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96789649 . G . PASS END=96789651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 96789652 . T . PASS END=96789661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr2 96789662 . G . PASS END=96789663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 96789664 . G . PASS END=96789664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 96789665 . A . PASS END=96789665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 96789666 . C . PASS END=96789669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:31,0 chr2 96789670 . C . PASS END=96789670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 96789671 . T . PASS END=96789690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:32,0 chr2 96789691 . T . PASS END=96789691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr2 96789692 . G . PASS END=96789700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1172:0,93,255:31,0 chr2 96789701 . G . PASS END=96789711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:25,0 chr2 96789712 . C . PASS END=96789724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1102:0,87,255:30,0 chr2 96789725 . C . PASS END=96789725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 96789726 . A . PASS END=96789735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 96789736 . C . PASS END=96789736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 96789737 . T . PASS END=96789742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 96789743 . A . PASS END=96789789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,848:0,61,255:26,0 chr2 96789790 . G . PASS END=96789801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr2 96789802 . C . PASS END=96789803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,747:0,63,255:21,0 chr2 96789804 . T . PASS END=96789810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 96789811 . G . PASS END=96789812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 96789813 . C . PASS END=96789813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:42:22:0,42,630:0,50,255:13,0 chr2 96789814 . C . PASS END=96789814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:13,0 chr2 96789815 . T . PASS END=96789818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:15,0 chr2 96789819 . C . PASS END=96789819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:15,0 chr2 96789820 . A . PASS END=96789864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,590:0,44,255:21,0 chr2 96789865 . C . PASS END=96789887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:23,0 chr2 96789888 . G . PASS END=96789888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 96789889 . G . PASS END=96789896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:26,0 chr2 96789897 . C . PASS END=96789932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1016:0,81,255:33,0 chr2 96789933 . C . PASS END=96789933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr2 96789934 . C . PASS END=96789982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1164:0,85,255:35,0 chr2 96789983 . C . PASS END=96789995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 96789996 . T . PASS END=96789996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr2 96789997 . G . PASS END=96790007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:25,0 chr2 96790008 . A . PASS END=96790008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:20,0 chr2 96790009 . C . PASS END=96790010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr2 96795563 . C . PASS END=96795566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr2 96795567 . C . PASS END=96795570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 96795571 . C . PASS END=96795571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 96795572 . G . PASS END=96795572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 96795573 . G . PASS END=96795574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 96795575 . G . PASS END=96795576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr2 96795577 . C . PASS END=96795577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 96795578 . T . PASS END=96795584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr2 96795585 . A . PASS END=96795585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 96795586 . C . PASS END=96795590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr2 96795591 . G . PASS END=96795595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96795596 . A . PASS END=96795596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 96795597 . G . PASS END=96795605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 96795606 . T . PASS END=96795606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:28,0 chr2 96795607 . T . PASS END=96795613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr2 96795614 . C . PASS END=96795615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr2 96795616 . C . PASS END=96795619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 96795620 . T . PASS END=96795620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:28,0 chr2 96795621 . G . PASS END=96795623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1056:0,87,255:29,0 chr2 96795624 . G . PASS END=96795624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 96795625 . T . PASS END=96795636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:31,0 chr2 96795637 . A . PASS END=96795637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 96795638 . G . PASS END=96795662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:31,0 chr2 96795663 . A . PASS END=96795663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:28,0 chr2 96795664 . C . PASS END=96795691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:31,0 chr2 96795692 . G . PASS END=96795694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr2 96795695 . G . PASS END=96795699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 96795700 . C . PASS END=96795703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr2 96795704 . G . PASS END=96795704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:24,0 chr2 96795705 . G . PASS END=96795710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1024:0,71,255:26,0 chr2 96795711 . G . PASS END=96795713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 96795714 . G . PASS END=96795715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 96795716 . G . PASS END=96795717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 96795803 . C . PASS END=96795819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1303:0,84,255:37,0 chr2 96795820 . A . PASS END=96795856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:37:0,95,1333:0,95,255:40,0 chr2 96795857 . T C, 160.91 PASS DP=39;MQ=250.00;FractionInformativeReads=0.974 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,23,0:0,15,0:111:199,114,0,1436,114,1436:255,117,0:0,0:1.6091e+02,1.1091e+02,0.0000e+00,4.5000e+02,1.4568e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,20:0,0,19,19 chr2 96795858 . G . PASS END=96795884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1148:0,85,255:34,0 chr2 96798279 . C . PASS END=96798305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:18,0 chr2 96798306 . G . PASS END=96798316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:26,0 chr2 96798317 . T . PASS END=96798329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 96798330 . G . PASS END=96798330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 96798331 . C . PASS END=96798387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 96798388 . G . PASS END=96798388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr2 96798389 . C . PASS END=96798392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr2 96798393 . T . PASS END=96798446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,869:0,67,255:26,0 chr2 96798447 . C . PASS END=96798460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:19,0 chr2 96799164 . C . PASS END=96799170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr2 96799171 . T . PASS END=96799171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1017:0,59,255:29,0 chr2 96799172 . G . PASS END=96799176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr2 96799177 . T . PASS END=96799177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 96799178 . G . PASS END=96799186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 96799187 . G . PASS END=96799187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 96799188 . A . PASS END=96799190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1101:0,90,255:30,0 chr2 96799191 . T . PASS END=96799191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,936:0,51,255:29,0 chr2 96799192 . C . PASS END=96799265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1086:0,80,255:35,0 chr2 96799266 . T . PASS END=96799266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:25,0 chr2 96799267 . G . PASS END=96799267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 96799268 . G . PASS END=96799281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,63,255:24,0 chr2 96799704 . C . PASS END=96799797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,101,1449:0,101,255:40,0 chr2 96801090 . C . PASS END=96801151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:37:0,91,1397:0,91,255:40,0 chr2 96803314 . C . PASS END=96803315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,724:0,66,255:22,0 chr2 96803316 . T . PASS END=96803316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 96803317 . G . PASS END=96803324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 96803325 . G . PASS END=96803325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 96803326 . C . PASS END=96803332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:24,0 chr2 96803333 . G . PASS END=96803333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 96803334 . T . PASS END=96803337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,906:0,72,255:24,0 chr2 96803338 . T . PASS END=96803338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 96803339 . G . PASS END=96803358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:26,0 chr2 96803359 . C . PASS END=96803489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1161:0,80,255:38,0 chr2 96803490 . G . PASS END=96803498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:24,0 chr2 96803499 . C . PASS END=96803505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 96803506 . A . PASS END=96803509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 96804121 . C . PASS END=96804171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:34:0,87,1305:0,97,255:40,0 chr2 96804172 . C . PASS END=96804175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,86,255:25,0 chr2 96809562 . T . PASS END=96809565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:15,0 chr2 96809566 . T . PASS END=96809566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 96809567 . G . PASS END=96809571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr2 96809572 . A . PASS END=96809572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 96809573 . G . PASS END=96809576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr2 96809577 . C . PASS END=96809577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 96809578 . T . PASS END=96809616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,585:0,41,255:19,0 chr2 96809617 . T . PASS END=96809617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 96809618 . T . PASS END=96809624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:19,0 chr2 96809625 . G . PASS END=96809628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 96809629 . A . PASS END=96809629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr2 96809630 . C . PASS END=96809646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr2 96809647 . A . PASS END=96809647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 96809648 . C . PASS END=96809654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 96809655 . A . PASS END=96809656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 96809657 . A . PASS END=96809664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 96809665 . T . PASS END=96809665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 96809666 . C . PASS END=96809671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 96809672 . G . PASS END=96809679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 96809680 . C . PASS END=96809680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:17,0 chr2 96809681 . G . PASS END=96809684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:19,0 chr2 96809685 . C . PASS END=96809686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96809687 . G . PASS END=96809692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr2 96809693 . G . PASS END=96809695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:36:20:0,36,540:0,60,255:13,0 chr2 96809696 . A . PASS END=96809727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:16,0 chr2 96809728 . C . PASS END=96809728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 96809729 . C . PASS END=96809761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr2 96809762 . T . PASS END=96809763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 96809764 . T . PASS END=96809764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 96809765 . T . PASS END=96809776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,482:0,39,255:13,0 chr2 96809893 . C . PASS END=96809893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 96809894 . A . PASS END=96809894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 96809895 . A . PASS END=96809899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:19,0 chr2 96809900 . G . PASS END=96809928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr2 96809929 . T . PASS END=96809929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 96809930 . C . PASS END=96810022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:25,0 chr2 96810023 . T . PASS END=96810111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,520:0,42,255:19,0 chr2 96810112 . C . PASS END=96810112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 96810500 . C . PASS END=96810500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 96810501 . T . PASS END=96810502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 96810503 . G . PASS END=96810516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 96810517 . C . PASS END=96810517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 96810518 . C . PASS END=96810520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 96810521 . G . PASS END=96810522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 96810523 . A . PASS END=96810549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 96810550 . T . PASS END=96810550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,730:0,55,255:22,0 chr2 96810551 . T . PASS END=96810588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,884:0,62,255:26,0 chr2 96810589 . C . PASS END=96810589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 96810590 . G . PASS END=96810591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,762:0,20,255:23,0 chr2 96810592 . G . PASS END=96810603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,931:0,75,255:25,0 chr2 96810604 . G . PASS END=96810624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:19,0 chr2 96810625 . C . PASS END=96810653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:13,0 chr2 96810654 . A . PASS END=96810668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr2 96810669 . T . PASS END=96810671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 96810672 . G . PASS END=96810678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 96810679 . C . PASS END=96810695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,474:0,35,255:13,0 chr2 96810696 . G . PASS END=96810696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 96810697 . C . PASS END=96810697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 96810698 . T . PASS END=96810713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 96810714 . A . PASS END=96810717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 96810718 . A . PASS END=96810719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 96810720 . A . PASS END=96810724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 96810725 . A . PASS END=96810727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 96810728 . G . PASS END=96810737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 96810738 . C . PASS END=96810768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,444:0,42,255:15,0 chr2 96810769 . C . PASS END=96810798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,482:0,39,255:13,0 chr2 96810799 . C . PASS END=96810801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 96810802 . C . PASS END=96810804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 96810805 . A . PASS END=96810815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:9,0 chr2 96810816 . T . PASS END=96810818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr2 96810819 . T . LowGQ END=96810819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:5,0 chr2 96810820 . C . PASS END=96810844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,14,202:6,0 chr2 96810845 . C . PASS END=96810845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 96810846 . C . PASS END=96810866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,188:0,18,188:6,0 chr2 96810867 . A . PASS END=96810873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 96810874 . G . PASS END=96810876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 96810877 . C . PASS END=96810886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:6,0 chr2 96810887 . G . PASS END=96810889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,210:3,0 chr2 96810890 . G . PASS END=96810897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:4,0 chr2 96810898 . C . LowGQ END=96810938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,90:0,0,94:3,0 chr2 96810939 . T . PASS END=96810974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,127:0,12,127:5,0 chr2 96810975 . C . PASS END=96810983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,164:5,0 chr2 96810984 . G . LowGQ END=96810984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,186:18,0,204:6,0 chr2 96810985 . C . PASS END=96810992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 96810993 . G . PASS END=96811005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:9,0 chr2 96811006 . G . PASS END=96811041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 96811042 . G . PASS END=96811093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr2 96852468 . T . PASS END=96852474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1028:0,90,255:30,0 chr2 96852475 . T . PASS END=96852475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 96852476 . A . PASS END=96852548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1197:0,80,255:39,0 chr2 96852549 . A . PASS END=96852549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:36,0 chr2 96852550 . C . PASS END=96852601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:38:0,96,1435:0,104,255:39,0 chr2 96852602 . T . PASS END=96852602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1239:0,67,255:31,0 chr2 96852603 . C . PASS END=96852616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:33,0 chr2 96852617 . T . PASS END=96852625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 96852626 . G . PASS END=96852632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 96852633 . C . PASS END=96852652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 96852955 . C . PASS END=96853039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,157,255:40,0 chr2 96858107 . C . PASS END=96858206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,142,255:40,0 chr2 96858814 . A . PASS END=96858876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,104,1447:0,104,255:40,0 chr2 96858877 . A . PASS END=96858898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:51:0,115,1800:0,115,255:40,0 chr2 96858980 . A . PASS END=96858996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:43:0,94,1582:0,94,255:40,0 chr2 96858997 . A . PASS END=96859033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,111,1665:0,132,255:40,0 chr2 96859034 . A G, 49.95 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=3.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,24,0:0.490,0.000:49:13,15,0:12,9,0:47:85,0,47,185,185,185:255,0,255:24,0:4.9953e+01,8.7237e-05,5.0000e+01,1.8472e+02,2.1949e+02,1.8773e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,12,9,15:13,12,18,6 chr2 96859035 . A . PASS END=96859071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:38:0,93,1291:0,97,255:40,0 chr2 96859072 . T . PASS END=96859090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,84,255:34,0 chr2 96860696 . C . PASS END=96860739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:35:0,96,1440:0,105,255:40,0 chr2 96860740 . C . PASS END=96860740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,2 chr2 96860741 . A . PASS END=96860741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1111:0,36,255:33,2 chr2 96860742 . A . PASS END=96860742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:34,0 chr2 96860743 . A . PASS END=96860745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1100:0,85,255:34,0 chr2 96861079 . C . PASS END=96861082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr2 96861083 . G . PASS END=96861091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:34,0 chr2 96861092 . A . PASS END=96861092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:33,0 chr2 96861093 . A . PASS END=96861093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1173:0,102,255:34,0 chr2 96861094 . G . PASS END=96861094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1177:0,55,255:32,0 chr2 96861095 . G . PASS END=96861121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1260:0,89,255:40,0 chr2 96861122 . C . PASS END=96861158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,119,1637:0,119,255:40,0 chr2 96861159 . C G, 49.59 PASS DP=56;MQ=250.00;MQRankSum=6.399;ReadPosRankSum=3.721;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,26,0:0.464,0.000:56:10,16,0:20,10,0:48:84,0,50,930,1039,1969:255,0,255:26,0:4.9594e+01,6.9375e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,11,17,9:17,13,17,9 chr2 96861160 . G . PASS END=96861196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:53:0,120,1800:0,129,255:40,0 chr2 96861197 . T . PASS END=96861285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,104,1346:0,104,255:40,0 chr2 96861286 . A . PASS END=96861286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1263:0,45,255:33,0 chr2 96861287 . T . PASS END=96861287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 96873883 . C . PASS END=96873896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 96873897 . C . PASS END=96873898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 96873899 . C . PASS END=96873899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 96873900 . C . PASS END=96873900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 96873901 . T . PASS END=96873903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 96873904 . A . PASS END=96873904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr2 96873905 . T . PASS END=96873905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 96873906 . C . PASS END=96873906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 96873907 . C . PASS END=96873912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 96873913 . T . PASS END=96873913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 96873914 . C . PASS END=96873918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 96873919 . C . PASS END=96873923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,181:0,21,181:7,0 chr2 96873924 . G . PASS END=96873924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 96873925 . A . PASS END=96873926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 96873927 . G . PASS END=96873928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:6,0 chr2 96873929 . C . PASS END=96873933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 96873934 . G . PASS END=96873934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 96873935 . C . PASS END=96873937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 96873938 . A . PASS END=96873938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 96873939 . C . PASS END=96873941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 96873942 . C . PASS END=96873944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 96873945 . C . PASS END=96873948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr2 96873949 . A . PASS END=96873950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:11:9:0,11,294:0,11,255:8,0 chr2 96873951 . G . PASS END=96873951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 96873952 . G . PASS END=96873952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 96873953 . C . LowGQ END=96873953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:8,0 chr2 96873954 . A . PASS END=96873956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr2 96873957 . G . PASS END=96873957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 96873958 . G . LowGQ END=96873958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:9,0 chr2 96873959 . C . PASS END=96873961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 96873962 . G . PASS END=96873962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 96873963 . G . PASS END=96873988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:13,0 chr2 96873989 . A . PASS END=96873990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 96873991 . A . PASS END=96873991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:13,0 chr2 96873992 . G . PASS END=96873993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 96873994 . C . PASS END=96873994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 96873995 . G . PASS END=96873996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 96873997 . C . PASS END=96873997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 96873998 . C . PASS END=96874014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,645:0,48,255:18,0 chr2 96874015 . G . PASS END=96874015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 96874016 . A . PASS END=96874024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,615:0,41,255:19,0 chr2 96874025 . A . PASS END=96874028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 96874029 . G . PASS END=96874029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 96874030 . A . PASS END=96874034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 96874035 . G . PASS END=96874035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 96874036 . C . PASS END=96874036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 96874037 . C . PASS END=96874037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 96874038 . G . PASS END=96874039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 96874040 . A . PASS END=96874040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,799:0,33,255:22,0 chr2 96874041 . G . PASS END=96874052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 96874053 . C . PASS END=96874053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 96874054 . T . PASS END=96874054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,806:0,28,255:22,0 chr2 96874055 . G . PASS END=96874055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 96874056 . C . PASS END=96874096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:26,0 chr2 96874097 . G . PASS END=96874098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96874099 . T . PASS END=96874134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,931:0,64,255:26,0 chr2 96874135 . C . PASS END=96874135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 96874136 . C . PASS END=96874136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 96874137 . C . PASS END=96874137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:20,0 chr2 96874138 . G . PASS END=96874139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 96874140 . C . PASS END=96874140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 96874141 . A . PASS END=96874145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 96874146 . G . PASS END=96874158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr2 96874159 . C . PASS END=96874172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:13:0,30,450:0,38,255:13,0 chr2 96915978 . G . PASS END=96915978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1505:0,113,255:40,0 chr2 96915986 . C . PASS END=96915986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 96916150 . C . PASS END=96916150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 96916155 . C . PASS END=96916155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 96916198 . C . PASS END=96916198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 96916275 . T . PASS END=96916275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 96916412 . G . PASS END=96916412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 96916497 . A . PASS END=96916497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 96916521 . C . PASS END=96916521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 96916635 . G . PASS END=96916635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 96916671 . T . PASS END=96916671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 96916686 . T . PASS END=96916686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:32,0 chr2 96916746 . A . PASS END=96916746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 96916786 . T . PASS END=96916786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 96916827 . C . PASS END=96916827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 96916829 . G . PASS END=96916829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 96916862 . G . PASS END=96916862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 96916904 . G . PASS END=96916904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 96917247 . G . PASS END=96917247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 96917253 . C . PASS END=96917253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 96917275 . G . PASS END=96917275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr2 96917301 . T . PASS END=96917301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 96917375 . G . PASS END=96917375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 96917418 . G . PASS END=96917418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 96917425 . C . PASS END=96917425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 96917659 . T . PASS END=96917659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1271:0,99,255:33,0 chr2 96917667 . C . PASS END=96917667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 96917697 . A . PASS END=96917697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 96917724 . A . PASS END=96917724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1604:0,94,255:38,0 chr2 96917727 . G . PASS END=96917727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 96917762 . G . PASS END=96917762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 96917908 . C . PASS END=96917908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 96917926 . G . PASS END=96917926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 96918140 . C . PASS END=96918140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 96918289 . G . PASS END=96918289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr2 96918294 . G . PASS END=96918294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 96918349 . A . PASS END=96918349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 96918368 . T . PASS END=96918368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr2 96918566 . C . PASS END=96918566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1373:0,108,255:36,0 chr2 96918663 . G . PASS END=96918663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,114,1710:0,116,255:38,0 chr2 96918680 . G . PASS END=96918680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1645:0,119,255:40,0 chr2 96918785 . A . PASS END=96918785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,124,255:40,0 chr2 96918847 . T . PASS END=96918981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:39:0,84,1316:0,84,255:40,0 chr2 96918982 . T . PASS END=96918982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:33,0 chr2 96918983 . C . PASS END=96918986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,105,1575:0,111,255:35,0 chr2 96918987 . A . PASS END=96918987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:34,0 chr2 96918988 . T . PASS END=96918991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 96918992 . A . PASS END=96918992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:31,0 chr2 96918993 . C . PASS END=96919027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1133:0,80,255:33,0 chr2 96919028 . G . PASS END=96919029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 96919030 . G . PASS END=96919030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,931:0,46,255:22,0 chr2 96919031 . C . PASS END=96919035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:30:0,65,1086:0,65,255:26,0 chr2 96919036 . A . PASS END=96919038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 96919039 . T . PASS END=96919039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:25,0 chr2 96919040 . C . PASS END=96919041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 96919042 . C . PASS END=96919058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 96919059 . G . PASS END=96919074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 96919075 . A . PASS END=96919079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1037:0,71,255:26,0 chr2 96919080 . G . PASS END=96919081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96919082 . A . PASS END=96919100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr2 96919101 . G . PASS END=96919102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 96919103 . C . PASS END=96919106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr2 96919107 . A . PASS END=96919107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96919108 . G . PASS END=96919108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 96919109 . C . PASS END=96919118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 96919119 . G . PASS END=96919123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 96919124 . A . PASS END=96919126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:26,0 chr2 96919127 . C . PASS END=96919133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 96919134 . C . PASS END=96919150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr2 96919151 . C . PASS END=96919163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 96919164 . C . PASS END=96919164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:26,0 chr2 96919165 . C . PASS END=96919186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 96919187 . A . PASS END=96919187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 96919188 . C . PASS END=96919191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 96919192 . T . PASS END=96919192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 96919193 . T . PASS END=96919200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 96919201 . C . PASS END=96919201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 96919202 . T . PASS END=96919208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1149:0,82,255:32,0 chr2 96919209 . T . PASS END=96919209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1278:0,70,255:31,0 chr2 96919210 . C . PASS END=96919265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1150:0,83,255:35,0 chr2 96919266 . A . PASS END=96919266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr2 96919267 . A . PASS END=96919300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1141:0,82,255:33,0 chr2 96919301 . T . PASS END=96919301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 96919302 . G . PASS END=96919325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 96919326 . C . PASS END=96919344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:26:0,66,990:0,74,255:26,0 chr2 96919546 . T . PASS END=96919604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,104,1457:0,104,255:40,0 chr2 96919605 . A . PASS END=96919641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,128,255:40,0 chr2 96919642 . C T, 46.79 PASS DP=47;MQ=250.00;MQRankSum=5.755;ReadPosRankSum=2.829;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,19,0:0.404,0.000:47:15,8,0:13,11,0:46:82,0,50,671,1001,1673:255,0,255:28,0:4.6794e+01,1.1261e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,12,5,14:11,17,6,13 chr2 96919643 . G . PASS END=96919679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,114,1710:0,117,255:40,0 chr2 96919680 . G . PASS END=96919853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1260:0,99,255:40,0 chr2 96919855 . T . PASS END=96919855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 96919859 . A . PASS END=96919859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 96920570 . C . PASS END=96920577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,584:0,40,255:19,0 chr2 96920578 . G . PASS END=96920579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96920580 . T . PASS END=96920580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,705:0,24,255:20,0 chr2 96920581 . A . PASS END=96920581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 96920582 . T . PASS END=96920589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 96920590 . G . PASS END=96920590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 96920591 . G . PASS END=96920591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 96920592 . C . PASS END=96920592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 96920593 . A . PASS END=96920593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 96920594 . T . PASS END=96920594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 96920595 . A . PASS END=96920598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr2 96920599 . A . PASS END=96920599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr2 96920600 . C . PASS END=96920606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr2 96920607 . T . PASS END=96920607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 96920608 . C . PASS END=96920619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:31,0 chr2 96920620 . A . PASS END=96920620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1058:0,65,255:30,0 chr2 96920621 . T . PASS END=96920628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1135:0,80,255:35,0 chr2 96920629 . C . PASS END=96920629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr2 96920630 . C . PASS END=96920665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:35:0,87,1275:0,87,255:38,0 chr2 96920666 . A . PASS END=96920666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1341:0,62,255:33,0 chr2 96920667 . G . PASS END=96920701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,86,255:34,0 chr2 96920702 . A . PASS END=96920715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:26:0,60,900:0,71,255:26,0 chr2 96920716 . C . PASS END=96920736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,720:0,47,255:18,0 chr2 96920738 . G . PASS END=96920739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr2 96920741 . G . PASS END=96920741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 96920745 . G . PASS END=96920745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 96930873 . C . PASS END=96930873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 96930876 . C . PASS END=96930890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:9,0 chr2 96930891 . G . PASS END=96930892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 96930893 . T . PASS END=96930893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 96930894 . G . PASS END=96930912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,405:0,33,255:12,0 chr2 96930913 . G . PASS END=96930913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 96930914 . G . PASS END=96930943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:13,0 chr2 96930944 . C . PASS END=96930955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:17,0 chr2 96930956 . T . PASS END=96930956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 96930957 . G . PASS END=96930983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:19,0 chr2 96930984 . T . PASS END=96930986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96930987 . A . PASS END=96930987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 96930988 . C . PASS END=96930988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:20,0 chr2 96930989 . A . PASS END=96930990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 96930991 . C . PASS END=96930994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 96930995 . G . PASS END=96930995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 96930996 . T . PASS END=96930996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 96930997 . G . PASS END=96931003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:21,0 chr2 96931004 . A . PASS END=96931004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 96931005 . G . PASS END=96931008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 96931009 . G . PASS END=96931009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 96931010 . C . PASS END=96931033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 96931034 . C . PASS END=96931068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 96931069 . G . PASS END=96931069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 96931070 . C . PASS END=96931084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:14,0 chr2 96931085 . C . PASS END=96931105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 96931106 . C . PASS END=96931108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 96931109 . G . PASS END=96931111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:15:11:0,15,225:0,33,255:6,0 chr2 96931112 . G . PASS END=96931112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:9:11:0,9,135:0,33,255:3,0 chr2 96931113 . C . PASS END=96931117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:12:11:0,12,180:0,33,255:4,0 chr2 96931118 . A . PASS END=96931119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:9:10:0,9,135:0,14,255:3,0 chr2 96931121 . C . PASS END=96931121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 96931137 . G . PASS END=96931137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,233:5,0 chr2 96931156 . T . PASS END=96931156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 96931233 . G . PASS END=96931233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 96931257 . G . PASS END=96931257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 96931671 . G . PASS END=96931671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 96931695 . A . PASS END=96931695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 96931717 . C . PASS END=96931717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:18,0 chr2 96932089 . A . PASS END=96932089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 96932090 . T . PASS END=96932090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 96932091 . G . PASS END=96932101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 96932102 . T . PASS END=96932102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 96932103 . G . PASS END=96932117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 96932118 . T . PASS END=96932118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 96932119 . G . PASS END=96932127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,488:0,39,255:13,0 chr2 96932128 . C . PASS END=96932158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr2 96932159 . G . PASS END=96932159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:15,0 chr2 96932160 . G . PASS END=96932169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 96932170 . G . PASS END=96932170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 96932171 . G . PASS END=96932227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:19,0 chr2 96933059 . G . PASS END=96933207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1039:0,81,255:40,0 chr2 96933363 . T . PASS END=96933636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:88:40:0,88,1440:0,88,255:40,0 chr2 96933637 . A . PASS END=96933662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr2 96934195 . C . PASS END=96934207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr2 96934208 . C . PASS END=96934225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,878:0,63,255:26,0 chr2 96934226 . T . PASS END=96934230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:29,0 chr2 96934231 . C . PASS END=96934232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 96934233 . G . PASS END=96934259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1135:0,80,255:35,0 chr2 96934260 . A . PASS END=96934260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:32,0 chr2 96934261 . T . PASS END=96934265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 96934266 . T . PASS END=96934266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1287:0,72,255:33,0 chr2 96934267 . G . PASS END=96934267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 96934268 . C . PASS END=96934268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr2 96934269 . C . PASS END=96934345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1233:0,86,255:37,0 chr2 96934346 . A . PASS END=96934369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,945:0,62,255:26,0 chr2 96934370 . G . PASS END=96934370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 96934371 . T . PASS END=96934387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:22,0 chr2 96934388 . A . PASS END=96934396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 96935006 . G . PASS END=96935057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:85:39:0,85,1452:0,85,255:40,0 chr2 96935058 . C . PASS END=96935058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:37,0 chr2 96935059 . G . PASS END=96935093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:33:0,86,1218:0,86,255:40,0 chr2 96936849 . G . PASS END=96936859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 96936860 . C . PASS END=96936894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:13,0 chr2 96936895 . A . PASS END=96936899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:16,0 chr2 96936900 . C . PASS END=96936900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr2 96936901 . G . PASS END=96936920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,576:0,48,255:19,0 chr2 96936921 . C . PASS END=96936930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr2 96936931 . C . PASS END=96936931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 96936932 . A . PASS END=96936952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,779:0,63,255:25,0 chr2 96936953 . C . PASS END=96936953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 96936954 . A . PASS END=96937033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,886:0,62,255:26,0 chr2 96937034 . G . PASS END=96937074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:19,0 chr2 96937075 . C . PASS END=96937089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 96940413 . C . PASS END=96940413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr2 96940417 . C . PASS END=96940417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 96940419 . C . PASS END=96940419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 96940463 . G . PASS END=96940463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 96940541 . A . PASS END=96940541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 96940689 . A . PASS END=96940689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 96940750 . T . PASS END=96940878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:82:35:0,82,1395:0,82,255:40,0 chr2 96940879 . A . PASS END=96940879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1158:0,74,255:31,0 chr2 96940880 . A . PASS END=96940893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1233:0,96,255:32,0 chr2 96940995 . C . PASS END=96941082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,85,255:40,0 chr2 96941083 . C . PASS END=96941086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:32:0,63,945:0,96,255:21,0 chr2 96941087 . T . PASS END=96941087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:21,0 chr2 96942638 . G . PASS END=96942638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 96942642 . C . PASS END=96942686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:33:0,88,1130:0,88,255:37,0 chr2 96942687 . T . PASS END=96942687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1266:0,45,255:34,0 chr2 96942688 . C . PASS END=96942705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1371:0,95,255:37,0 chr2 96942706 . A . PASS END=96942706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:29,0 chr2 96942707 . C . PASS END=96942723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1158:0,85,255:32,0 chr2 96942729 . G . PASS END=96942730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:27,0 chr2 96942814 . C . PASS END=96942814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 96942816 . C . PASS END=96942816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 96942819 . C . PASS END=96942979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:41:0,90,1350:0,93,255:40,0 chr2 96943277 . C . PASS END=96943288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,873:0,78,255:26,0 chr2 96943289 . A . PASS END=96943289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 96943290 . C . PASS END=96943290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 96943291 . G . PASS END=96943303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1016:0,87,255:30,0 chr2 96943304 . A . PASS END=96943304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:27,0 chr2 96943305 . G . PASS END=96943392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1164:0,83,255:33,0 chr2 96943393 . C . PASS END=96943393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:30,0 chr2 96943394 . A . PASS END=96943410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,86,255:32,0 chr2 96943411 . T . PASS END=96943411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr2 96943412 . G . PASS END=96943430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1140:0,83,255:32,0 chr2 96943431 . C . PASS END=96943435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:24,0 chr2 96943436 . C . PASS END=96943453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:22,0 chr2 96943545 . C . PASS END=96943688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:40:0,81,1293:0,81,255:40,0 chr2 96943975 . C . PASS END=96944096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,114,1707:0,117,255:40,0 chr2 96944098 . T . PASS END=96944098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 96944285 . C . PASS END=96944286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 96944287 . A . PASS END=96944288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:25:0,45,823:0,45,255:22,0 chr2 96944289 . G . PASS END=96944306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,826:0,61,255:26,0 chr2 96944307 . A . PASS END=96944309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96944310 . G . PASS END=96944313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 96944314 . G . PASS END=96944317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 96944318 . C . PASS END=96944320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1084:0,74,255:27,0 chr2 96944321 . T . PASS END=96944337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 96944338 . G . PASS END=96944338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 96944339 . G . PASS END=96944383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1080:0,86,255:34,0 chr2 96944384 . C . PASS END=96944384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:31,0 chr2 96944385 . C . PASS END=96944399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1150:0,85,255:35,0 chr2 96944400 . C . PASS END=96944400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:34,0 chr2 96944401 . T . PASS END=96944422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1227:0,88,255:35,0 chr2 96944423 . G . PASS END=96944423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr2 96944424 . G . PASS END=96944449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1210:0,86,255:34,0 chr2 96944547 . C . PASS END=96944547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1054:0,79,255:31,0 chr2 96944548 . C . PASS END=96944551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1134:0,80,255:32,0 chr2 96944552 . A . PASS END=96944552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 96944553 . G . PASS END=96944736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1260:0,85,255:40,0 chr2 96945189 . C . PASS END=96945294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1158:0,83,255:40,0 chr2 96945295 . T . PASS END=96945297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 96947552 . G . PASS END=96947660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:36:0,88,1288:0,88,255:40,0 chr2 96948939 . C . PASS END=96948948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr2 96948949 . G . PASS END=96948955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 96948956 . T . PASS END=96948956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 96948957 . C . PASS END=96948968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1147:0,87,255:30,0 chr2 96948969 . G . PASS END=96948969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr2 96948970 . C . PASS END=96948971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr2 96948972 . C . PASS END=96949050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1180:0,84,255:39,0 chr2 96949051 . C . PASS END=96949051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:34,0 chr2 96949052 . A . PASS END=96949089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,88,255:35,0 chr2 96949090 . C . PASS END=96949090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr2 96949096 . C . PASS END=96949096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr2 96949273 . C . PASS END=96949289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:27,0 chr2 96949290 . T . PASS END=96949451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1147:0,80,255:40,0 chr2 96949551 . C . PASS END=96949653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:44:0,92,1629:0,92,255:40,0 chr2 96949654 . A . PASS END=96949654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:55:48:0,55,1332:0,55,255:40,0 chr2 96949655 . G . PASS END=96949656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,127,255:40,0 chr2 96949657 . G . PASS END=96949657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:56:48:0,56,1565:0,56,255:40,0 chr2 96949658 . A . PASS END=96949672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:47:0,81,1553:0,81,255:40,0 chr2 96949673 . C . PASS END=96949673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1549:0,78,255:38,0 chr2 96949674 . A . PASS END=96949674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 96949675 . A . PASS END=96949675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1541:0,78,255:38,0 chr2 96949676 . T . PASS END=96949678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:97:48:0,97,1585:0,97,255:40,0 chr2 96949679 . G . PASS END=96949679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1480:0,75,255:39,0 chr2 96949680 . A . PASS END=96949680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 96949681 . A . PASS END=96949681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:32:45:0,32,1253:0,32,255:38,0 chr2 96949682 . T . PASS END=96949699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:41:0,106,1383:0,106,255:40,0 chr2 96949700 . A . PASS END=96949700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:43:42:0,43,1255:0,43,255:33,0 chr2 96949701 . G . PASS END=96949701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 96949702 . G . PASS END=96949703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:40:41:0,40,1170:0,40,255:34,0 chr2 96949704 . G . PASS END=96949704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1305:0,90,255:36,0 chr2 96949705 . A . PASS END=96949705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1266:0,73,255:35,0 chr2 96949706 . T . PASS END=96949710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1287:0,81,255:38,0 chr2 96949711 . C . PASS END=96949711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1325:0,70,255:35,0 chr2 96949712 . G . PASS END=96949712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 96949713 . C . PASS END=96949713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:50:39:0,50,1111:0,50,255:33,0 chr2 96949714 . A . PASS END=96949714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1147:0,69,255:35,0 chr2 96949715 . T . PASS END=96949719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1285:0,100,255:37,0 chr2 96949720 . G . PASS END=96949720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:33:38:0,33,1050:0,33,255:31,0 chr2 96949721 . A . PASS END=96949721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1230:0,62,255:32,0 chr2 96949722 . G . PASS END=96949723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1155:0,94,255:32,0 chr2 96949724 . A . PASS END=96949724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1127:0,39,255:29,0 chr2 96949725 . G . PASS END=96949725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1131:0,45,255:28,0 chr2 96949726 . A . PASS END=96949729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:36:0,84,1188:0,94,255:31,0 chr2 96949730 . C . PASS END=96949730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,950:0,41,255:24,0 chr2 96949731 . T . PASS END=96949732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 96949733 . C . PASS END=96949734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:32:0,72,1026:0,72,255:27,0 chr2 96949735 . A . PASS END=96949735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 96949736 . A . PASS END=96949736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,972:0,57,255:27,0 chr2 96949737 . G . PASS END=96949739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 96949740 . A . PASS END=96949740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:3:29:0,3,609:0,3,255:23,0 chr2 96949741 . G . PASS END=96949741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 96949742 . G . PASS END=96949742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 96950096 . C . PASS END=96950100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1280:0,92,255:34,0 chr2 96950101 . T . PASS END=96950101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1205:0,64,255:33,0 chr2 96950102 . C . PASS END=96950323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1288:0,81,255:40,0 chr2 96950918 . C . PASS END=96950944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:17,0 chr2 96950945 . G . PASS END=96950954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,759:0,60,255:26,0 chr2 96950955 . C . PASS END=96950997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1135:0,86,255:35,0 chr2 96950998 . A . PASS END=96950998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:38:35:0,38,794:0,38,255:31,0 chr2 96950999 . C . PASS END=96951044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1181:0,88,255:36,0 chr2 96951045 . A . PASS END=96951046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:35:0,72,1148:0,72,255:31,0 chr2 96951047 . G . PASS END=96951048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1064:0,55,255:31,0 chr2 96951049 . T . PASS END=96951054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1122:0,88,255:34,0 chr2 96951055 . C . PASS END=96951067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:31:0,60,900:0,63,255:24,0 chr2 96951068 . A . PASS END=96951073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:22:0,44,793:0,44,255:20,0 chr2 96951074 . A . PASS END=96951074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,686:0,27,255:17,0 chr2 96951075 . A . PASS END=96951078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:18,0 chr2 96952049 . C . PASS END=96952049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:24,0 chr2 96952050 . C . PASS END=96952052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr2 96952053 . G . PASS END=96952057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 96952058 . G . PASS END=96952058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 96952059 . G . PASS END=96952060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96952061 . T . PASS END=96952061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:26,0 chr2 96952062 . G . PASS END=96952071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr2 96952072 . A . PASS END=96952072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,946:0,70,255:28,0 chr2 96952073 . A . PASS END=96952080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr2 96952081 . T . PASS END=96952081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 96952082 . T . PASS END=96952083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 96952084 . T . PASS END=96952084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 96952085 . C . PASS END=96952092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1125:0,90,255:32,0 chr2 96952093 . A . PASS END=96952093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr2 96952094 . G . PASS END=96952102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:32,0 chr2 96952103 . A . PASS END=96952103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,956:0,63,255:27,0 chr2 96952104 . G . PASS END=96952107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 96952108 . C . PASS END=96952108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:29,0 chr2 96952109 . T . PASS END=96952164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1097:0,80,255:36,0 chr2 96952165 . G . PASS END=96952178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:27:0,70,986:0,70,255:26,0 chr2 96952179 . C . PASS END=96952179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr2 96952180 . A . PASS END=96952182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:24,0 chr2 96952183 . A . PASS END=96952183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:23,0 chr2 96952184 . T . PASS END=96952222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,839:0,69,255:24,0 chr2 96952426 . A . PASS END=96952615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,99,1485:0,117,255:40,0 chr2 96952630 . A . PASS END=96952630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 96952744 . C . PASS END=96952795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:39,0 chr2 96952796 . G . PASS END=96952832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,102,1606:0,102,255:40,0 chr2 96952833 . A G, 41.05 PASS DP=43;MQ=250.00;MQRankSum=5.216;ReadPosRankSum=-0.227;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,14,0:0.333,0.000:42:10,10,0:18,4,0:41:76,0,50,464,805,1268:255,0,255:28,0:4.1048e+01,3.6294e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,17,8,6:17,11,8,6 chr2 96952834 . C . PASS END=96952870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:39:0,92,1391:0,92,255:40,0 chr2 96952871 . C . PASS END=96952898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1305:0,98,255:36,0 chr2 96953177 . C . PASS END=96953295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:34:0,102,1242:0,102,255:40,0 chr2 96953601 . A . PASS END=96953707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,102,1607:0,102,255:40,0 chr2 96954389 . C . PASS END=96954389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 96954401 . C . PASS END=96954484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,164,255:40,0 chr2 96954492 . G . PASS END=96954492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 96954775 . C . PASS END=96954855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,145,255:40,0 chr2 96954965 . C . PASS END=96955113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:37:0,86,1390:0,86,255:40,0 chr2 96955114 . T . PASS END=96955115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:33,0 chr2 96955116 . A . PASS END=96955117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:33,0 chr2 96955537 . C . PASS END=96955549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,825:0,61,255:26,0 chr2 96955550 . G . PASS END=96955552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:29,0 chr2 96955553 . T . PASS END=96955554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1039:0,71,255:28,0 chr2 96955555 . C . PASS END=96955571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:34,0 chr2 96955572 . G . PASS END=96955573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:69:36:0,69,1223:0,69,255:33,0 chr2 96955574 . T . PASS END=96955577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1280:0,92,255:34,0 chr2 96955578 . T . PASS END=96955578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:33,0 chr2 96955579 . C . PASS END=96955719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1150:0,83,255:40,0 chr2 96955720 . C . PASS END=96955732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:23,0 chr2 96955733 . T . PASS END=96955734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr2 96956064 . C . PASS END=96956252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:33:0,81,1215:0,98,255:40,0 chr2 96956422 . C . PASS END=96956553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:92:38:0,92,1398:0,92,255:40,0 chr2 96957130 . C . PASS END=96957240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,104,1384:0,104,255:40,0 chr2 96957489 . C . PASS END=96957489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 96957490 . T . PASS END=96957499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 96957500 . C . PASS END=96957505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 96957506 . C . PASS END=96957515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 96957516 . G . PASS END=96957516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 96957517 . A . PASS END=96957517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 96957518 . C . PASS END=96957519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96957520 . T . PASS END=96957520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 96957521 . C . PASS END=96957548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:29:0,82,1157:0,82,255:32,0 chr2 96957549 . C . PASS END=96957550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 96957551 . G . PASS END=96957575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr2 96957576 . C . PASS END=96957578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 96957579 . G . PASS END=96957585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr2 96957586 . A . PASS END=96957630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,854:0,61,255:25,0 chr2 96957631 . A . PASS END=96957631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 96957632 . C . PASS END=96957638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 96958710 . C . PASS END=96958830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:37:0,87,1305:0,95,255:40,0 chr2 96958831 . A . PASS END=96958833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,95,255:24,0 chr2 96959054 . C . PASS END=96959066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1244:0,108,255:36,0 chr2 96959067 . A . PASS END=96959067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1284:0,78,255:34,0 chr2 96959068 . A . PASS END=96959068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 96959069 . A . PASS END=96959069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1215:0,72,255:35,0 chr2 96959070 . A . PASS END=96959230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:32:0,84,1260:0,96,255:40,0 chr2 96959231 . A . PASS END=96959241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,76,255:25,0 chr2 96959242 . C . PASS END=96959247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 96961226 . C . PASS END=96961250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:41:15:0,41,529:0,41,255:19,0 chr2 96961251 . G . PASS END=96961254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 96961255 . A . PASS END=96961255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 96961256 . G . PASS END=96961263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,963:0,75,255:26,0 chr2 96961264 . C . PASS END=96961265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 96961266 . C . PASS END=96961266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr2 96961267 . C . PASS END=96961269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 96961270 . C . PASS END=96961275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 96961276 . G . PASS END=96961279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 96961280 . G . PASS END=96961280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 96961281 . A . PASS END=96961390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1055:0,81,255:40,0 chr2 96961391 . C . PASS END=96961396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:25,0 chr2 96962270 . T . PASS END=96962270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 96962274 . C . PASS END=96962275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 96962276 . T . PASS END=96962276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 96962277 . T . PASS END=96962293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:35,0 chr2 96962294 . T . PASS END=96962294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:33,0 chr2 96962295 . C . PASS END=96962429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:34:0,92,1332:0,92,255:40,0 chr2 96962660 . G . PASS END=96962660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 96962671 . A . PASS END=96962672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1296:0,102,255:35,0 chr2 96962673 . T . PASS END=96962673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:33,0 chr2 96962674 . A . PASS END=96962808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1197:0,84,255:40,0 chr2 96963101 . T . PASS END=96963134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,532:0,45,255:19,0 chr2 96963135 . G . PASS END=96963138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr2 96963139 . C . PASS END=96963139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 96963140 . A . PASS END=96963140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 96963141 . T . PASS END=96963141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 96963142 . G . PASS END=96963147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 96963148 . C . PASS END=96963187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1141:0,82,255:33,0 chr2 96963188 . A . PASS END=96963188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:31,0 chr2 96963189 . A . PASS END=96963207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:32,0 chr2 96963208 . C . PASS END=96963226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 96963227 . G . PASS END=96963229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 96963230 . A . PASS END=96963230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 96963231 . A . PASS END=96963231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,1000:0,40,255:26,0 chr2 96963232 . A . PASS END=96963233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,946:0,70,255:26,0 chr2 96963234 . A . PASS END=96963234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,992:0,35,255:26,0 chr2 96963235 . C . PASS END=96963235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 96963236 . C . PASS END=96963236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 96963237 . A . PASS END=96963246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr2 96963247 . A . PASS END=96963247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,950:0,70,255:26,0 chr2 96963248 . G . PASS END=96963248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 96963249 . T . PASS END=96963249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 96963250 . C . PASS END=96963251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 96963252 . A . PASS END=96963252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:28,0 chr2 96963253 . G . PASS END=96963259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,83,255:30,0 chr2 96963260 . C . PASS END=96963260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:26,0 chr2 96963261 . C . PASS END=96963268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 96963269 . C . PASS END=96963269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr2 96963270 . A . PASS END=96963270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 96963271 . G . PASS END=96963274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1002:0,70,255:25,0 chr2 96963375 . C . PASS END=96963421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1178:0,83,255:34,0 chr2 96963422 . G . PASS END=96963422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 96963423 . A . PASS END=96963423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 96963424 . G . PASS END=96963425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 96963426 . C . PASS END=96963428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:27,0 chr2 96963429 . A . PASS END=96963447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:26,0 chr2 96963448 . G . PASS END=96963448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 96963449 . A . PASS END=96963450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 96963451 . C . PASS END=96963458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr2 96964022 . T . PASS END=96964030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:40:0,92,1376:0,92,255:37,0 chr2 96964031 . A . PASS END=96964031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1109:0,37,255:32,0 chr2 96964032 . T . PASS END=96964032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 96964033 . C . PASS END=96964033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1188:0,64,255:33,0 chr2 96964034 . C . PASS END=96964146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:39:0,81,1319:0,81,255:40,0 chr2 96964147 . T . PASS END=96964158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:66:37:0,66,990:0,111,255:25,0 chr2 96964341 . T . PASS END=96964440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,165,255:40,0 chr2 96964553 . C . PASS END=96964684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1215:0,80,255:40,0 chr2 96964685 . C . PASS END=96964698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 96964699 . C . PASS END=96964701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96964702 . C . PASS END=96964705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr2 96965067 . A . PASS END=96965165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,150,255:40,0 chr2 96965169 . T . PASS END=96965169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 96966736 . C . PASS END=96966791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,120,1800:0,122,255:40,0 chr2 96967250 . G . PASS END=96967250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr2 96967252 . G . PASS END=96967253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1149:0,82,255:32,0 chr2 96967262 . C . PASS END=96967439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:35:0,81,1215:0,92,255:40,0 chr2 96967440 . A . PASS END=96967454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:22,0 chr2 96968897 . C . PASS END=96968897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 96968898 . T . PASS END=96968900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:20:0,49,745:0,49,255:20,0 chr2 96968901 . T . PASS END=96968916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,894:0,69,255:26,0 chr2 96968917 . G . PASS END=96969066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,986:0,81,255:40,0 chr2 96969067 . G . PASS END=96969067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:29,0 chr2 96969068 . C . PASS END=96969068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr2 96969073 . T . PASS END=96969073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 96969076 . A . PASS END=96969076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 96970443 . T . PASS END=96970443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 96970444 . T . PASS END=96970444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 96970445 . G . PASS END=96970457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,939:0,65,255:26,0 chr2 96970458 . T . PASS END=96970466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 96970467 . T . PASS END=96970467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 96970468 . G . PASS END=96970508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,986:0,81,255:40,0 chr2 96970509 . T . PASS END=96970509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:38,0 chr2 96970510 . C . PASS END=96970576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:29:0,81,1215:0,87,255:40,0 chr2 96970577 . A . PASS END=96970601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr2 96970602 . G . PASS END=96970606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 96970613 . A . PASS END=96970613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 96971131 . C . PASS END=96971131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1344:0,90,255:35,0 chr2 96971132 . G . PASS END=96971132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1334:0,76,255:36,0 chr2 96971133 . C . PASS END=96971143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1324:0,90,255:38,0 chr2 96971144 . T . PASS END=96971144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1321:0,76,255:33,0 chr2 96971145 . A . PASS END=96971173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1166:0,85,255:35,0 chr2 96971174 . A . PASS END=96971174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1096:0,69,255:30,0 chr2 96971175 . T . PASS END=96971175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 96971191 . G . PASS END=96971191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:27,0 chr2 96971202 . C . PASS END=96971202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96971270 . C . PASS END=96971270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 96971289 . A . PASS END=96971289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 96991578 . A . PASS END=96991587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,105,1513:0,105,255:40,0 chr2 96991942 . A . PASS END=96991986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:26,0 chr2 96991987 . A . PASS END=96991987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr2 96991988 . A . PASS END=96992015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr2 96992016 . A . PASS END=96992031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr2 96992032 . T . PASS END=96992042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 96992043 . T . PASS END=96992046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 96992346 . A . PASS END=96992356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr2 96992357 . C . PASS END=96992378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,853:0,69,255:26,0 chr2 96992379 . G . PASS END=96992393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:29,0 chr2 96992394 . A . PASS END=96992394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 96992395 . T . PASS END=96992475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1005:0,83,255:37,0 chr2 96992476 . A . PASS END=96992476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 96992477 . C . PASS END=96992480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr2 96992481 . T . PASS END=96992507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr2 96992508 . C . PASS END=96992509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 96992510 . A . PASS END=96992527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,923:0,62,255:26,0 chr2 96992528 . C . PASS END=96992528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:22,0 chr2 96992529 . C . PASS END=96992540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:24,0 chr2 96992541 . G . PASS END=96992541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:19,0 chr2 96992542 . A . PASS END=96992558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 96992559 . C . PASS END=96992564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 96992565 . G . PASS END=96992565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 96992566 . C . PASS END=96992574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr2 96992575 . G . PASS END=96992576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 96992577 . C . PASS END=96992604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,652:0,43,255:19,0 chr2 96992605 . A . PASS END=96992616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:21,0 chr2 96992617 . A . PASS END=96992648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,658:0,54,255:18,0 chr2 96992649 . T . PASS END=96992649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 96992650 . G . PASS END=96992689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 96992690 . G . PASS END=96992690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 96992691 . A . PASS END=96992691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 96992692 . T . PASS END=96992693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 96992694 . C . PASS END=96992694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 96992695 . T . PASS END=96992695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 96992696 . G . PASS END=96992703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 96992704 . T . PASS END=96992704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr2 96992705 . G . PASS END=96992705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr2 96992706 . T . PASS END=96992706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96992707 . G . PASS END=96992708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 96992709 . A . PASS END=96992716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 96992717 . C . PASS END=96992717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 96992718 . C . PASS END=96992719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 96992720 . C . PASS END=96992720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 96992721 . T . PASS END=96992721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 96992722 . T . PASS END=96992724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 96992725 . G . PASS END=96992725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 96992726 . C . PASS END=96992726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:21,0 chr2 96992727 . C . PASS END=96992734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:22,0 chr2 96992735 . C . PASS END=96992735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 96992736 . G . PASS END=96992736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 96992737 . T . PASS END=96992737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr2 96992738 . C . PASS END=96992739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 96992740 . T . PASS END=96992740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 96992741 . T . PASS END=96992745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 96992746 . T . PASS END=96992746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:20,0 chr2 96992747 . C . PASS END=96992776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:22:0,61,846:0,61,255:26,0 chr2 96992777 . C . PASS END=96992778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 96992779 . T . PASS END=96992787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1006:0,68,255:26,0 chr2 96992788 . G . PASS END=96992791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr2 96992792 . T . PASS END=96992792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 96992793 . G . PASS END=96992793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 96992794 . A . PASS END=96992794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1101:0,57,255:28,0 chr2 96992795 . G . PASS END=96992795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr2 96992796 . G . PASS END=96992818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1210:0,86,255:34,0 chr2 96992819 . T . PASS END=96992819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:31,0 chr2 96992820 . G . PASS END=96992984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1039:0,86,255:36,0 chr2 96992985 . C . PASS END=96992985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:27,0 chr2 96992986 . G . PASS END=96992992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1064:0,90,255:30,0 chr2 96992993 . G . PASS END=96992993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 96992994 . G . PASS END=96993005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr2 96993006 . T . PASS END=96993006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 96993007 . T . PASS END=96993015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 96993016 . G . PASS END=96993016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 96993017 . C . PASS END=96993022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 96993023 . C . PASS END=96993023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 96993024 . A . PASS END=96993035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,83,255:30,0 chr2 96993036 . T . PASS END=96993036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:29,0 chr2 96993037 . T . PASS END=96993037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 96993038 . T . PASS END=96993038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 96993039 . G . PASS END=96993058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1083:0,83,255:33,0 chr2 96993059 . T . PASS END=96993093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr2 96993094 . T . PASS END=96993104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:19,0 chr2 96993105 . G . PASS END=96993107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 96993108 . A . PASS END=96993108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 96993109 . C . PASS END=96993111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 96993112 . T . PASS END=96993112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr2 96993113 . G . PASS END=96993113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 96993114 . T . PASS END=96993114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,634:0,52,255:21,0 chr2 96993115 . T . PASS END=96993120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 96993121 . T . PASS END=96993121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 96993122 . G . PASS END=96993124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 96993125 . G . PASS END=96993125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:19,0 chr2 96993126 . A . PASS END=96993126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96993127 . T . PASS END=96993132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 96993133 . A . PASS END=96993134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 96993135 . C . PASS END=96993137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 96993138 . G . PASS END=96993138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 96993139 . C . PASS END=96993139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 96993140 . C . PASS END=96993142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 96993143 . G . PASS END=96993143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:21,0 chr2 96993144 . G . PASS END=96993147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:23,0 chr2 96993148 . G . PASS END=96993148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 96993149 . C . PASS END=96993172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:26,0 chr2 96993173 . G . PASS END=96993177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 96993178 . A . PASS END=96993178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 96993179 . A . PASS END=96993179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96993180 . T . PASS END=96993200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,909:0,62,255:26,0 chr2 96993201 . C . PASS END=96993205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 96993206 . A . PASS END=96993249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,64,255:26,0 chr2 96993250 . C . PASS END=96993286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,613:0,51,255:19,0 chr2 96993287 . T . PASS END=96993291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 96993292 . G . PASS END=96993306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:17,0 chr2 96993307 . T . PASS END=96993307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:15,0 chr2 96993308 . A . PASS END=96993311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 96993312 . G . PASS END=96993313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:12,0 chr2 96993314 . G . PASS END=96993327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,629:0,51,255:18,0 chr2 96993328 . A . PASS END=96993328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr2 96993329 . G . PASS END=96993352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,653:0,41,255:19,0 chr2 96993353 . T . PASS END=96993353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 96993354 . G . PASS END=96993354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr2 96993355 . C . PASS END=96993355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 96993356 . C . PASS END=96993358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 96993359 . G . PASS END=96993362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96993363 . C . PASS END=96993363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 96993364 . T . PASS END=96993364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 96993365 . T . PASS END=96993367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 96993368 . G . PASS END=96993371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 96993372 . C . PASS END=96993375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 96993376 . A . PASS END=96993377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96993378 . T . PASS END=96993382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr2 96993383 . C . PASS END=96993388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96993389 . A . PASS END=96993389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,660:0,19,255:20,0 chr2 96993390 . C . PASS END=96993406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,837:0,63,255:22,0 chr2 96993407 . T . PASS END=96993407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 96993408 . A . PASS END=96993424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 96993425 . C . PASS END=96993425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 96993426 . C . PASS END=96993426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 96993427 . G . PASS END=96993428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 96993429 . C . PASS END=96993430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 96993431 . G . PASS END=96993431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 96993432 . G . PASS END=96993434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96993435 . T . PASS END=96993435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 96993436 . A . PASS END=96993442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,833:0,69,255:24,0 chr2 96993443 . A . PASS END=96993443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 96993444 . G . PASS END=96993452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 96993453 . C . PASS END=96993453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:19,0 chr2 96993454 . T . PASS END=96993457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 96993458 . A . PASS END=96993470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:20,0 chr2 96993471 . C . PASS END=96993490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:22,0 chr2 96993491 . C . PASS END=96993492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 96993493 . C . PASS END=96993494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 96993495 . T . PASS END=96993497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:56:22:0,56,829:0,56,255:20,0 chr2 96993498 . G . PASS END=96993498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 96993499 . T . PASS END=96993499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 96993500 . C . PASS END=96993517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr2 96993518 . T . PASS END=96993518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 96993519 . C . PASS END=96993520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 96993521 . T . PASS END=96993521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 96993522 . G . PASS END=96993536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 96993537 . A . PASS END=96993537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr2 96993538 . C . PASS END=96993539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 96993540 . A . PASS END=96993540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:19,0 chr2 96993541 . G . PASS END=96993570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,824:0,69,255:25,0 chr2 96993571 . G . PASS END=96993571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 96993572 . T . PASS END=96993574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 96993575 . G . PASS END=96993575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 96993576 . C . PASS END=96993668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,861:0,63,255:28,0 chr2 96993669 . A . PASS END=96993672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 96993673 . T . PASS END=96993673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 96993674 . A . PASS END=96993694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 96993695 . C . PASS END=96993712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,903:0,62,255:26,0 chr2 96993713 . T . PASS END=96993719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 96993720 . A . PASS END=96993720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 96993721 . C . PASS END=96993725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 96993726 . C . PASS END=96993726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 96993727 . T . PASS END=96993727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 96993728 . C . PASS END=96993729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,1 chr2 96993730 . T . PASS END=96993732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:52:29:0,52,998:0,52,255:27,1 chr2 96993733 . A . PASS END=96993736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:28:0,71,993:0,71,255:27,1 chr2 96993737 . C . PASS END=96993739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,1 chr2 96993740 . G . PASS END=96993740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:26:33:0,26,1128:0,26,255:28,1 chr2 96993741 . C . PASS END=96993747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 96993748 . T . PASS END=96993748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 96993749 . G . PASS END=96993749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 96993750 . C . PASS END=96993752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 96993753 . C . PASS END=96993756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:27,0 chr2 96993757 . C T, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.724;ReadPosRankSum=1.443;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,16,0:0.516,0.000:31:8,6,0:7,10,0:48:85,0,50,564,536,1101:255,0,255:15,0:5.0000e+01,6.5492e-05,5.2929e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,7,9:11,4,9,7 chr2 96993758 . G . PASS END=96993773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1062:0,80,255:31,0 chr2 96993774 . A . PASS END=96993774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:29,0 chr2 96993775 . T . PASS END=96993779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:31,0 chr2 96993780 . T . PASS END=96993780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,952:0,62,255:29,0 chr2 96993781 . C . PASS END=96993781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 96993782 . T . PASS END=96993782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr2 96993783 . C . PASS END=96993794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1186:0,83,255:33,0 chr2 96993795 . G . PASS END=96993813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1228:0,89,255:35,0 chr2 96993814 . G . PASS END=96993814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:26,0 chr2 96993815 . C . PASS END=96993846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:36,0 chr2 96993847 . T . PASS END=96993883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1288:0,92,255:36,0 chr2 96993884 . A G, 49.56 PASS DP=39;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=3.282;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,18,0:0.462,0.000:39:10,10,0:11,8,0:48:84,0,50,644,714,1358:255,0,255:20,0:4.9557e+01,6.9893e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,8,10:10,11,10,8 chr2 96993885 . A . PASS END=96993885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 96993886 . T . PASS END=96993886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1296:0,62,255:34,0 chr2 96993887 . C . PASS END=96993921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:37:0,90,1167:0,90,255:38,0 chr2 96993922 . T . PASS END=96993993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1139:0,80,255:35,0 chr2 96993994 . A . PASS END=96993994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:31,0 chr2 96993995 . G . PASS END=96994007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:33,0 chr2 96994008 . C . PASS END=96994012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:31,0 chr2 96994013 . T . PASS END=96994026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,900:0,76,255:26,0 chr2 96994027 . C . PASS END=96994033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:24:0,51,765:0,56,255:19,0 chr2 96994034 . T . PASS END=96994034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,729:0,25,255:14,0 chr2 96994035 . T . PASS END=96994035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:24:0,42,630:0,72,255:14,0 chr2 96994036 . G . PASS END=96994037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr2 97001568 . A . PASS END=97001584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 97001585 . A . PASS END=97001585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 97001586 . G . PASS END=97001586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 97007380 . C . PASS END=97007402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr2 97007403 . T . PASS END=97007403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 97007404 . C . PASS END=97007425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,429:0,39,255:13,0 chr2 97007426 . C . PASS END=97007445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr2 97007446 . C . PASS END=97007480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,839:0,63,255:24,0 chr2 97007481 . A . PASS END=97007481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr2 97007482 . A . PASS END=97007488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 97007489 . T . PASS END=97007489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,754:0,33,255:21,0 chr2 97007490 . C . PASS END=97007520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 97007521 . A . PASS END=97007521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr2 97007522 . C . PASS END=97007558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,786:0,62,255:26,0 chr2 97007559 . C . PASS END=97007559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr2 97007560 . G . PASS END=97007565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 97007566 . G . PASS END=97007566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr2 97007567 . C . PASS END=97007590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr2 97007591 . C . PASS END=97007592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 97007593 . G . PASS END=97007596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:21,0 chr2 97007597 . T . PASS END=97007597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr2 97007598 . G . PASS END=97007612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 97007613 . T . PASS END=97007613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 97007614 . T . PASS END=97007627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 97007628 . A . PASS END=97007628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 97007629 . G . PASS END=97007630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 97007631 . A . PASS END=97007631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 97007632 . G . PASS END=97007632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 97007788 . G . PASS END=97007801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:70:0,120,1800:0,128,255:40,0 chr2 97007802 . C . PASS END=97007802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,9:75:75:75:0,75,1985:0,75,255:40,0 chr2 97007803 . A . PASS END=97007878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,4:76:99:55:0,101,1800:0,101,255:40,0 chr2 97008494 . A . PASS END=97008586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:55:0,120,1800:0,129,255:40,1 chr2 97008904 . G . PASS END=97009037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1149:0,93,255:40,0 chr2 97009038 . T . PASS END=97009038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:34,0 chr2 97009039 . G . PASS END=97009042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1382:0,101,255:36,0 chr2 97009843 . A . PASS END=97009967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,117,1755:0,145,255:40,1 chr2 97017569 . A . PASS END=97017572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr2 97017573 . A . PASS END=97017587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr2 97017588 . A . PASS END=97017588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 97017589 . G . PASS END=97017598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1030:0,87,255:29,0 chr2 97017599 . T . PASS END=97017599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 97017600 . C . PASS END=97017602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 97017603 . T . PASS END=97017603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:29,0 chr2 97017604 . T . PASS END=97017736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1158:0,84,255:40,0 chr2 97017737 . G . PASS END=97017737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 97017738 . T . PASS END=97017739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97017740 . G . PASS END=97017741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:27,0 chr2 97017742 . A . PASS END=97017746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 97017747 . C . PASS END=97017747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 97017748 . A . PASS END=97017749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97017750 . A . PASS END=97017758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 97019044 . C . PASS END=97019044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 97019045 . G . PASS END=97019045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr2 97019046 . C . PASS END=97019127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1102:0,80,255:40,0 chr2 97019128 . A . PASS END=97019140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1037:0,74,255:26,0 chr2 97019921 . T . PASS END=97019921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 97019922 . C . PASS END=97019922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr2 97019923 . T . PASS END=97020011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:32:0,83,1188:0,83,255:40,0 chr2 97020012 . C . PASS END=97020048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:88:42:0,88,1520:0,88,255:40,0 chr2 97020049 . T C, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.287;ReadPosRankSum=3.437;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,24,0:0.600,0.000:40:9,16,0:7,8,0:46:85,0,45,185,185,185:255,0,255:14,0:5.0000e+01,1.1416e-04,4.7881e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,8,8,16:13,3,12,12 chr2 97020050 . G . PASS END=97020071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1458:0,87,255:40,0 chr2 97020072 . G . PASS END=97020072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1418:0,46,255:32,0 chr2 97020073 . G . PASS END=97020074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1459:0,84,255:33,0 chr2 97020075 . A . PASS END=97020075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr2 97020076 . T . PASS END=97020086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:35,0 chr2 97020087 . T . PASS END=97020087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 97020088 . C . PASS END=97020093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 97020094 . C . PASS END=97020095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 97020096 . G . PASS END=97020104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,900:0,87,255:26,0 chr2 97020105 . C . PASS END=97020126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,651:0,41,255:19,0 chr2 97024783 . G . PASS END=97024926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1033:0,87,255:40,0 chr2 97024927 . C . PASS END=97024931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 97025881 . A . PASS END=97025987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:92:0,120,1800:0,255,255:40,0 chr2 97026326 . G . PASS END=97026333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1164:0,83,255:35,0 chr2 97026334 . T . PASS END=97026335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1319:0,72,255:35,0 chr2 97026336 . T . PASS END=97026337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 97026338 . C . PASS END=97026338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1316:0,59,255:35,0 chr2 97026339 . T . PASS END=97026438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:37:0,87,1372:0,87,255:40,0 chr2 97026439 . A . PASS END=97026439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:35,0 chr2 97026440 . G . PASS END=97026447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:31,0 chr2 97026448 . G . PASS END=97026448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:26,0 chr2 97030218 . G . PASS END=97030218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1251:0,77,255:34,0 chr2 97030219 . T . PASS END=97030246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,103,1360:0,103,255:40,0 chr2 97030247 . T C, 45.73 PASS DP=64;MQ=250.00;MQRankSum=6.701;ReadPosRankSum=0.206;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,25,0:0.391,0.000:64:18,17,0:21,8,0:45:81,0,50,857,1369,2227:255,0,255:40,0:4.5725e+01,1.3797e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,15,16,9:21,18,16,9 chr2 97030248 . A . PASS END=97030284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,172,255:40,0 chr2 97030285 . T . PASS END=97030329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,158,255:40,0 chr2 97031614 . G . PASS END=97031677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,100,1360:0,100,255:40,0 chr2 97031678 . T . PASS END=97031678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1595:0,75,255:40,0 chr2 97031679 . C . PASS END=97031749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:40:0,97,1403:0,97,255:40,0 chr2 97031750 . A . PASS END=97031750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1345:0,71,255:32,0 chr2 97031751 . C . PASS END=97031771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1215:0,84,255:35,0 chr2 97031772 . A . PASS END=97031796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:25,0 chr2 97032995 . G . PASS END=97032995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:19,0 chr2 97032996 . T . PASS END=97032996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 97032997 . A . PASS END=97032997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 97032998 . A . PASS END=97032999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 97033000 . T . PASS END=97033000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 97033001 . A . PASS END=97033009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 97033010 . A . PASS END=97033010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 97033011 . T . PASS END=97033017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:25,0 chr2 97033018 . T . PASS END=97033024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr2 97033025 . A . PASS END=97033025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 97033026 . C . PASS END=97033028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:30,0 chr2 97033029 . C . PASS END=97033029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 97033030 . C . PASS END=97033111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,991:0,80,255:37,0 chr2 97034710 . G . PASS END=97034710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,889:0,78,255:26,0 chr2 97034711 . C . PASS END=97034721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,843:0,81,255:29,0 chr2 97034722 . G . PASS END=97034722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:28,0 chr2 97034723 . A . PASS END=97034723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 97034724 . A . PASS END=97034724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr2 97034725 . G . PASS END=97034725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 97034726 . C . PASS END=97034726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:28,0 chr2 97034727 . T . PASS END=97034728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:30,0 chr2 97034729 . G . PASS END=97034729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,906:0,40,255:27,0 chr2 97034730 . A . PASS END=97034731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 97034732 . A . PASS END=97034732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr2 97034733 . A . PASS END=97034734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1005:0,90,255:30,0 chr2 97034735 . A . PASS END=97034735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1007:0,73,255:29,0 chr2 97034736 . A . PASS END=97034785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1044:0,80,255:32,0 chr2 97034786 . A . PASS END=97034786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr2 97034787 . G . PASS END=97034790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 97034791 . C . PASS END=97034801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr2 97035163 . C . PASS END=97035250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:55:0,120,1800:0,143,255:40,0 chr2 97039030 . A . PASS END=97039089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:34:0,91,1250:0,91,255:40,0 chr2 97163981 . T . PASS END=97163981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 97163982 . C . PASS END=97163986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 97163987 . G . PASS END=97163991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97163992 . C . PASS END=97164022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,615:0,48,255:17,0 chr2 97164023 . A . PASS END=97164023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 97164024 . G . PASS END=97164036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:17,0 chr2 97164037 . C . PASS END=97164037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 97164038 . T . PASS END=97164071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,615:0,40,255:19,0 chr2 97164072 . T . PASS END=97164091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,853:0,63,255:24,0 chr2 97164092 . A . PASS END=97164092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 97164093 . C . PASS END=97164095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 97164096 . T . PASS END=97164096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,808:0,45,255:23,0 chr2 97164097 . A . PASS END=97164119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr2 97164120 . C . PASS END=97164126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 97164127 . C . PASS END=97164128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 97164129 . A . PASS END=97164147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 97164148 . G . PASS END=97164163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,619:0,60,255:20,0 chr2 97164164 . A . PASS END=97164178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:17,0 chr2 97164179 . T . PASS END=97164183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97164927 . A . PASS END=97164966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:39:0,87,1329:0,87,255:40,0 chr2 97164967 . C . PASS END=97164967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:35,0 chr2 97164968 . T . PASS END=97165011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1217:0,86,255:38,0 chr2 97165115 . C . PASS END=97165117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr2 97165118 . T . PASS END=97165118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr2 97165119 . G . PASS END=97165136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,662:0,57,255:19,0 chr2 97165137 . G . PASS END=97165143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 97165144 . A . PASS END=97165149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 97165150 . C . PASS END=97165156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 97165157 . T . PASS END=97165157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 97165158 . G . PASS END=97165167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:23,0 chr2 97165168 . A . PASS END=97165168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 97165169 . G . PASS END=97165174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 97165175 . T . PASS END=97165182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:18,0 chr2 97165183 . G . PASS END=97165183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,646:0,24,255:13,0 chr2 97165184 . G . PASS END=97165186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:14,0 chr2 97166176 . C . PASS END=97166198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,410:0,33,255:13,0 chr2 97166199 . G . PASS END=97166203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 97166204 . A G, 48.96 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=1.362;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:4,1,0:7,7,0:48:84,0,50,270,391,661:237,0,255:11,0:4.8965e+01,7.6882e-05,5.3000e+01,2.6987e+02,4.2577e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,4,4:4,7,5,3 chr2 97166205 . T . PASS END=97166233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,662:0,41,255:19,0 chr2 97166234 . G . PASS END=97166237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 97166238 . A . PASS END=97166241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,743:0,47,255:19,0 chr2 97166242 . G . PASS END=97166249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:23,0 chr2 97166250 . T . PASS END=97166250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 97166251 . C . PASS END=97166251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 97166252 . A . PASS END=97166252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 97166253 . C . PASS END=97166282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,856:0,69,255:24,0 chr2 97166283 . T . PASS END=97166283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:22,0 chr2 97166284 . T . PASS END=97166288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 97166289 . A . PASS END=97166289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 97166290 . A . PASS END=97166291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 97166292 . A . PASS END=97166292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:22,0 chr2 97166293 . G . PASS END=97166309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,892:0,62,255:26,0 chr2 97166310 . A . PASS END=97166323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 97166324 . C . PASS END=97166360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,930:0,69,255:26,0 chr2 97166361 . G . PASS END=97166361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 97166362 . C . PASS END=97166377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr2 97166378 . C . PASS END=97166380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 97166381 . C . PASS END=97166399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,71,255:26,0 chr2 97166400 . A . PASS END=97166400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:25,0 chr2 97166401 . G . PASS END=97166430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:26,0 chr2 97166431 . A . PASS END=97166433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97166434 . C . PASS END=97166458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,925:0,75,255:25,0 chr2 97166459 . G . PASS END=97166459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr2 97166460 . C . PASS END=97166470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 97166471 . G . PASS END=97166471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 97166472 . C . PASS END=97166507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,842:0,72,255:25,0 chr2 97166508 . A . PASS END=97166565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:19,0 chr2 97166566 . T . PASS END=97166566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 97166567 . G . PASS END=97166570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 97166571 . C . PASS END=97166579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 97166580 . A . PASS END=97166609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,620:0,45,255:16,0 chr2 97166610 . G . PASS END=97166612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,540:0,35,255:12,0 chr2 97166613 . C . PASS END=97166638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 97166639 . T . PASS END=97166639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 97166640 . G . PASS END=97166661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 97170996 . T . PASS END=97171023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,114,1710:0,123,255:40,0 chr2 97202564 . A . PASS END=97202567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr2 97206381 . A . PASS END=97206414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:64:0,120,1800:0,158,255:40,0 chr2 97213139 . C . PASS END=97213140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 97213141 . G . PASS END=97213141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 97213142 . C . PASS END=97213145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr2 97213146 . T . PASS END=97213146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr2 97213147 . G . PASS END=97213150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 97213151 . A . PASS END=97213157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,729:0,47,255:19,0 chr2 97213158 . C . PASS END=97213159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 97213160 . G . PASS END=97213160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 97213161 . G . PASS END=97213183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,872:0,66,255:25,0 chr2 97213184 . C . PASS END=97213196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1149:0,90,255:31,0 chr2 97213197 . T . PASS END=97213197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 97213198 . G . PASS END=97213200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97213201 . T . PASS END=97213220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr2 97213221 . G . PASS END=97213221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 97213222 . C . PASS END=97213254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr2 97215058 . G . PASS END=97215061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 97215062 . C . PASS END=97215072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:25,0 chr2 97215073 . G . PASS END=97215083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:31,0 chr2 97215084 . G . PASS END=97215084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 97215085 . G . PASS END=97215138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:31:0,93,1157:0,93,255:38,0 chr2 97215139 . T . PASS END=97215139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1119:0,50,255:32,0 chr2 97215140 . T . PASS END=97215161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1061:0,81,255:35,0 chr2 97215162 . C . PASS END=97215162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:26,0 chr2 97215163 . A . PASS END=97215166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97215167 . A . PASS END=97215167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 97215168 . G . PASS END=97215168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 97215169 . A . PASS END=97215170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,953:0,65,255:27,0 chr2 97215171 . G . PASS END=97215171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 97215172 . G . PASS END=97215178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:26,0 chr2 97215179 . A . PASS END=97215179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:24,0 chr2 97215180 . T . PASS END=97215191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:25,0 chr2 97215192 . G . PASS END=97215192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 97215193 . C . PASS END=97215196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:24,0 chr2 97215490 . T . PASS END=97215542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,114,1721:0,114,255:40,0 chr2 97215763 . C . PASS END=97215772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,415:0,36,255:13,0 chr2 97215773 . C . PASS END=97215773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 97215774 . C . PASS END=97215777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 97215778 . G . PASS END=97215795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,437:0,39,255:13,0 chr2 97215796 . C . PASS END=97215803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 97215804 . G . PASS END=97215807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 97215808 . C . PASS END=97215815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 97215816 . C . PASS END=97215831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,441:0,36,255:13,0 chr2 97215832 . G . PASS END=97215832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 97215833 . T . PASS END=97215837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 97215838 . C . PASS END=97215838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr2 97215839 . G . PASS END=97215840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 97215841 . G . PASS END=97215841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 97215842 . T . PASS END=97215851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr2 97215852 . G . PASS END=97215854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 97215855 . G . PASS END=97215855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr2 97215856 . G . PASS END=97215874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 97215875 . C . PASS END=97215889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,188:0,18,188:6,0 chr2 97215890 . C . PASS END=97215891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 97215892 . C . PASS END=97215892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 97215893 . G . PASS END=97215899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr2 97215900 . G . PASS END=97215900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:8,0 chr2 97215901 . C . PASS END=97215901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 97215902 . G . PASS END=97215910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 97215911 . A . PASS END=97215911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 97215912 . G . PASS END=97215918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 97215919 . T . PASS END=97215919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 97215920 . T . PASS END=97215942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,344:0,33,255:13,0 chr2 97215943 . T . PASS END=97215943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 97215944 . G . PASS END=97215946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 97215947 . A . PASS END=97215947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 97215948 . G . PASS END=97215993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,396:0,33,255:13,0 chr2 97215994 . G . PASS END=97215996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 97215997 . A . PASS END=97216005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:10,0 chr2 97216006 . C . PASS END=97216007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 97216008 . C . PASS END=97216020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 97216021 . A . PASS END=97216022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 97216311 . G . PASS END=97216313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:19,0 chr2 97216314 . G . PASS END=97216316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 97216317 . C . PASS END=97216317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 97216318 . C . PASS END=97216322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:23,0 chr2 97216323 . A . PASS END=97216323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 97216324 . T . PASS END=97216327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 97216328 . T . PASS END=97216328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 97216329 . G . PASS END=97216349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:23,0 chr2 97216350 . T . PASS END=97216350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 97216351 . G . PASS END=97216369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr2 97216370 . C . PASS END=97216370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 97216371 . C . PASS END=97216372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 97216373 . A . PASS END=97216373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 97216374 . G . PASS END=97216385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,917:0,78,255:26,0 chr2 97216386 . G . PASS END=97216388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 97216389 . C . PASS END=97216406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1008:0,68,255:26,0 chr2 97216407 . C . PASS END=97216407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:22,0 chr2 97216408 . A . PASS END=97216409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,64,255:22,0 chr2 97216410 . G . PASS END=97216410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:19,0 chr2 97216411 . G . PASS END=97216421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr2 97216422 . G . PASS END=97216438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,46,255:19,0 chr2 97216439 . A . PASS END=97216443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:27:17:0,27,405:0,40,255:9,0 chr2 97216444 . G . PASS END=97216456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr2 97216457 . G . PASS END=97216457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 97216458 . G . PASS END=97216462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr2 97216463 . T . PASS END=97216470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:12:0,21,315:0,36,255:8,0 chr2 97216836 . A . PASS END=97216838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 97216839 . A . PASS END=97216839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr2 97216840 . T . PASS END=97216861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 97216862 . T . PASS END=97216872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 97216873 . C . PASS END=97216874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 97216875 . G . PASS END=97216875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 97216876 . C . PASS END=97216879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 97216880 . A . PASS END=97216880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:21,0 chr2 97216881 . C . PASS END=97216891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 97216892 . G . PASS END=97216892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr2 97216893 . G . PASS END=97216893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 97216894 . A . LowGQ END=97216894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,706:8,0,255:20,0 chr2 97216895 . G . PASS END=97216895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 97216896 . C . PASS END=97216899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 97216900 . C . PASS END=97216900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr2 97216901 . C . PASS END=97216901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 97216902 . A . PASS END=97216903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr2 97216904 . G . PASS END=97216904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 97216905 . A . PASS END=97216906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr2 97216907 . C . PASS END=97216907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 97216908 . A . PASS END=97216909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:14:23:0,14,759:0,14,255:22,0 chr2 97216910 . C . PASS END=97216919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:33:24:0,33,831:0,33,255:24,0 chr2 97216920 . C . PASS END=97216920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr2 97216921 . A . PASS END=97216921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr2 97216922 . G . PASS END=97216931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,925:0,45,255:23,0 chr2 97216932 . T . PASS END=97216932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,817:0,39,255:21,0 chr2 97216933 . C . PASS END=97216933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 97216934 . T . PASS END=97216934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:21,0 chr2 97216935 . G . PASS END=97216936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr2 97216937 . G . PASS END=97216937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 97216938 . T . PASS END=97216941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr2 97216942 . C . PASS END=97216942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 97216943 . T . PASS END=97216943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:22,0 chr2 97216944 . G . PASS END=97216948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 97216949 . C . PASS END=97216949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 97216950 . T . PASS END=97217013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,710:0,69,255:25,0 chr2 97217014 . G . PASS END=97217014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 97217015 . G . PASS END=97217025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 97217026 . T . PASS END=97217065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,684:0,57,255:19,0 chr2 97217066 . G . PASS END=97217068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 97217069 . C . PASS END=97217084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,810:0,57,255:19,0 chr2 97217085 . C . PASS END=97217085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:16,0 chr2 97217086 . A . PASS END=97217108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:16,0 chr2 97217109 . C . PASS END=97217109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97217110 . A . PASS END=97217119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 97217120 . G . PASS END=97217149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 97217150 . A . PASS END=97217150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 97217151 . G . PASS END=97217155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 97217156 . T . PASS END=97217183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 97217184 . A . PASS END=97217184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 97217185 . A . PASS END=97217191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 97217192 . G . PASS END=97217197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr2 97217198 . G . PASS END=97217236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:9,0 chr2 97217237 . C . PASS END=97217244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 97217245 . A . PASS END=97217245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:5,0 chr2 97217246 . G . PASS END=97217268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 97217269 . C . PASS END=97217293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr2 97217294 . C . PASS END=97217316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:12,0 chr2 97217317 . T . PASS END=97217317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 97217318 . G . PASS END=97217322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 97217323 . A . PASS END=97217323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:11,0 chr2 97217324 . G . PASS END=97217333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 97217334 . C . PASS END=97217334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 97217335 . A . PASS END=97217375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:13,0 chr2 97217376 . C . PASS END=97217383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr2 97217384 . G . PASS END=97217384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 97217385 . C . PASS END=97217403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 97217404 . T . PASS END=97217411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 97217412 . A . PASS END=97217414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 97217415 . G . PASS END=97217416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:31:16:0,31,466:0,31,255:13,0 chr2 97217417 . G . PASS END=97217430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr2 97217431 . G . PASS END=97217431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 97217432 . G . PASS END=97217440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,631:0,43,255:19,0 chr2 97217441 . C . PASS END=97217464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,847:0,66,255:23,0 chr2 97217465 . T . PASS END=97217465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr2 97217466 . A . PASS END=97217479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,847:0,69,255:23,0 chr2 97217480 . A . PASS END=97217480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr2 97217481 . A . PASS END=97217481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 97217482 . A . PASS END=97217489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,53,255:19,0 chr2 97217490 . C . PASS END=97217491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 97217492 . C . PASS END=97217492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 97217493 . T . PASS END=97217493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 97217494 . A . PASS END=97217494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 97217495 . C . PASS END=97217515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,687:0,63,255:21,0 chr2 97217516 . G . PASS END=97217516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr2 97217517 . G . PASS END=97217552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,825:0,66,255:23,0 chr2 97217553 . A . PASS END=97217553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 97217554 . C . PASS END=97217560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 97217561 . G . PASS END=97217576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:20:0,43,668:0,43,255:19,0 chr2 97217577 . A . PASS END=97217577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,645:0,29,255:17,0 chr2 97217578 . G . PASS END=97217585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,630:0,40,255:18,0 chr2 97217586 . C . PASS END=97217586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,635:0,18,255:13,0 chr2 97217587 . T . PASS END=97217587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:13,0 chr2 97217588 . G . PASS END=97217588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 97217589 . G . PASS END=97217589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 97217590 . G . PASS END=97217590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:12,0 chr2 97217591 . C . PASS END=97217598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 97217599 . G . PASS END=97217599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 97217600 . C . PASS END=97217603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr2 97217604 . C . PASS END=97217604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 97217605 . T . PASS END=97217616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr2 97217617 . G . PASS END=97217617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 97217618 . T . PASS END=97217633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:16,0 chr2 97217634 . A . PASS END=97217639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr2 97217640 . C . PASS END=97217645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 97217646 . G . PASS END=97217647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 97217648 . C . PASS END=97217648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr2 97217649 . G . PASS END=97217649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 97217650 . T . LowGQ END=97217650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,433:10,0,255:11,0 chr2 97217651 . G . PASS END=97217651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:12,0 chr2 97217652 . T . PASS END=97217652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:12,0 chr2 97217653 . C . PASS END=97217653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 97217654 . T . PASS END=97217655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:12,0 chr2 97217656 . C . PASS END=97217656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 97217657 . C . PASS END=97217657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:10,0 chr2 97217658 . T . PASS END=97217658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 97217659 . T . LowGQ END=97217662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:10,0 chr2 97217663 . T . PASS END=97217735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr2 97217736 . G . PASS END=97217736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 97217737 . C . PASS END=97217738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,543:0,31,255:13,0 chr2 97217739 . C . PASS END=97217777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:16,0 chr2 97217778 . C . PASS END=97217778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 97217779 . T . PASS END=97217779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 97217780 . G . PASS END=97217780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:15,0 chr2 97217781 . C . PASS END=97217802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:17,0 chr2 97217803 . G . PASS END=97217803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 97217804 . C . PASS END=97217821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,553:0,48,255:19,0 chr2 97217822 . G . PASS END=97217843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr2 97217844 . A . PASS END=97217844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 97217845 . G . PASS END=97217851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 97217852 . G . PASS END=97217852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 97217853 . G . PASS END=97217872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,764:0,63,255:22,0 chr2 97217873 . C . PASS END=97217899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,584:0,41,255:19,0 chr2 97217900 . G . PASS END=97217903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:22,0 chr2 97217904 . A . PASS END=97217904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 97217905 . T . PASS END=97217923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:26,0 chr2 97217924 . C . PASS END=97217930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 97217931 . C . PASS END=97217931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr2 97217932 . C . PASS END=97218110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1133:0,91,255:40,0 chr2 97218111 . G . PASS END=97218111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr2 97218112 . C . PASS END=97218124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:29,0 chr2 97218125 . C . PASS END=97218133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 97261348 . T . PASS END=97261368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,186,255:40,0 chr2 97263880 . T . PASS END=97263897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,105,1421:0,111,255:39,0 chr2 97265803 . C . PASS END=97265862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:65:0,120,1800:0,188,255:40,0 chr2 97266211 . T . PASS END=97266240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,160,255:40,0 chr2 97267380 . C . PASS END=97267401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:19,0 chr2 97267402 . T . PASS END=97267415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,683:0,60,255:23,0 chr2 97267416 . C . PASS END=97267416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 97267417 . T . PASS END=97267420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr2 97267421 . A . PASS END=97267421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 97267422 . T . PASS END=97267431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 97267432 . C . PASS END=97267432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:24,0 chr2 97267433 . C . PASS END=97267440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1008:0,78,255:26,0 chr2 97267441 . A . PASS END=97267446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr2 97267447 . C . PASS END=97267447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 97267448 . T . PASS END=97267448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 97267449 . C . PASS END=97267449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 97267450 . A . PASS END=97267473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1180:0,93,255:31,0 chr2 97267474 . C . PASS END=97267474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 97267475 . C . PASS END=97267484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1119:0,93,255:31,0 chr2 97267485 . C . PASS END=97267513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr2 97267853 . C . PASS END=97267868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 97267869 . G . PASS END=97267879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:12,0 chr2 97267880 . G . PASS END=97267886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 97267887 . G . PASS END=97267887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 97267888 . A . PASS END=97267921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,520:0,42,255:19,0 chr2 97267922 . T . PASS END=97267922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 97267923 . C . PASS END=97267935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr2 97267936 . A . PASS END=97267936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr2 97267937 . T . PASS END=97267951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr2 97267952 . C . PASS END=97267968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 97267969 . A . PASS END=97267969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 97267970 . A . PASS END=97267975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr2 97267976 . A . PASS END=97267976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 97267977 . G . PASS END=97267977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 97267978 . A . PASS END=97267978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,674:0,11,255:18,0 chr2 97267979 . G . PASS END=97267986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 97267987 . G . PASS END=97268001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:22,0 chr2 97268002 . C . PASS END=97268014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 97268015 . T . PASS END=97268015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 97268016 . G . PASS END=97268019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 97268020 . C . PASS END=97268020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 97268021 . C . PASS END=97268042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr2 97268043 . C . PASS END=97268067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,31,255:12,0 chr2 97268068 . C . PASS END=97268075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 97268490 . C . PASS END=97268496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,997:0,87,255:29,0 chr2 97268497 . G . PASS END=97268497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 97268498 . C . PASS END=97268510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1094:0,80,255:33,0 chr2 97268511 . G . PASS END=97268511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr2 97268512 . G . PASS END=97268520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:33,0 chr2 97268521 . G . PASS END=97268521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:32,0 chr2 97268522 . G . PASS END=97268580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:31:0,80,1181:0,80,255:37,0 chr2 97268581 . C . PASS END=97268581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 97268582 . T . PASS END=97268594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr2 97268595 . G . PASS END=97268599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:24,0 chr2 97269987 . C . PASS END=97270006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:19,0 chr2 97270007 . G . PASS END=97270035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:26,0 chr2 97270036 . G . PASS END=97270041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 97270042 . G . PASS END=97270044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 97270045 . A . PASS END=97270045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 97270046 . C . PASS END=97270046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 97270047 . T . PASS END=97270098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:35,0 chr2 97270099 . A . PASS END=97270117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:26,0 chr2 97270516 . T . PASS END=97270521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 97270522 . G . PASS END=97270529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:31,0 chr2 97270530 . A . PASS END=97270530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,796:0,21,255:27,0 chr2 97270531 . A . PASS END=97270534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 97270535 . C . PASS END=97270535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 97270536 . T . PASS END=97270545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 97270546 . T . PASS END=97270546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:28,0 chr2 97270547 . T . PASS END=97270563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 97270564 . T . PASS END=97270564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 97270565 . G . PASS END=97270569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 97270570 . A . PASS END=97270600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,931:0,62,255:26,0 chr2 97271057 . C . PASS END=97271057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 97271058 . T . PASS END=97271058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:22,0 chr2 97271059 . T . PASS END=97271070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr2 97271071 . C . PASS END=97271084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:30,0 chr2 97271085 . A . PASS END=97271085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 97271086 . C . PASS END=97271157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1105:0,81,255:37,0 chr2 97271158 . C . PASS END=97271158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:30,0 chr2 97271159 . C . PASS END=97271177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1225:0,86,255:33,0 chr2 97271178 . A . PASS END=97271178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:31,0 chr2 97271179 . T . PASS END=97271195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1162:0,83,255:33,0 chr2 97271196 . A . PASS END=97271208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:26,0 chr2 97271209 . T . PASS END=97271209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,851:0,45,255:22,0 chr2 97271210 . C . PASS END=97271210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 97271211 . T . PASS END=97271211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 97271212 . T . PASS END=97271214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 97271215 . T . PASS END=97271215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr2 97271216 . C . PASS END=97271243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,878:0,64,255:24,0 chr2 97271244 . G . PASS END=97271248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 97272707 . C . PASS END=97272784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:82:0,120,1800:0,223,255:40,0 chr2 97274245 . C . PASS END=97274401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:37:0,90,1325:0,95,255:40,0 chr2 97274601 . C . PASS END=97274609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr2 97274610 . T . PASS END=97274610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 97274611 . G . PASS END=97274611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 97274612 . A . PASS END=97274612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr2 97274613 . G . PASS END=97274616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 97274617 . G . PASS END=97274659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:26,0 chr2 97274660 . G . PASS END=97274660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97274661 . C . PASS END=97274675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 97274676 . G . PASS END=97274679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97274680 . A . PASS END=97274680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 97274681 . A . PASS END=97274693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr2 97274694 . C . PASS END=97274694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 97274695 . A . PASS END=97274715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 97274716 . T . PASS END=97274716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 97274717 . T . PASS END=97274721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 97274722 . G . PASS END=97274722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 97274723 . C . PASS END=97274741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1078:0,84,255:31,0 chr2 97274742 . A . PASS END=97274770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr2 97274771 . G . PASS END=97274777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:22:0,54,810:0,55,255:19,0 chr2 97274778 . A . PASS END=97274784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 97274785 . A . PASS END=97274801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,704:0,44,255:19,0 chr2 97275236 . C . PASS END=97275299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:66:0,120,1800:0,171,255:40,0 chr2 97276463 . C . PASS END=97276469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1274:0,105,255:36,0 chr2 97276470 . T . PASS END=97276470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1242:0,72,255:35,0 chr2 97276471 . G . PASS END=97276555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:37:0,82,1330:0,82,255:40,0 chr2 97276556 . A . PASS END=97276556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1238:0,61,255:33,0 chr2 97276557 . G . PASS END=97276576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1177:0,80,255:35,0 chr2 97276577 . A . PASS END=97276600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr2 97276601 . A . PASS END=97276603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 97276604 . A . PASS END=97276606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97276607 . G . PASS END=97276608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 97276609 . A . PASS END=97276614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 97276615 . T . PASS END=97276618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 97276619 . T . PASS END=97276620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97276801 . C . PASS END=97276875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,108,1474:0,109,255:40,0 chr2 97277980 . A . PASS END=97278090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,115,1545:0,115,255:40,0 chr2 97278199 . C . PASS END=97278298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:31:0,87,1305:0,93,255:40,0 chr2 97278299 . A . PASS END=97278299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:28,0 chr2 97278300 . C . PASS END=97278300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 97278555 . C . PASS END=97278589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1108:0,87,255:34,0 chr2 97278590 . G . PASS END=97278590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr2 97278591 . G . PASS END=97278664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1302:0,102,255:40,0 chr2 97278665 . G . PASS END=97278665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:31,0 chr2 97278666 . T . PASS END=97278668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,98,255:32,0 chr2 97278669 . G . PASS END=97278669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1105:0,60,255:30,0 chr2 97278670 . C . PASS END=97278671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 97279225 . T . PASS END=97279234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,987:0,84,255:31,0 chr2 97279235 . T . PASS END=97279235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 97279236 . G . PASS END=97279349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1150:0,83,255:40,0 chr2 97279350 . T . PASS END=97279356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:29:0,72,1080:0,79,255:26,0 chr2 97285096 . C . PASS END=97285107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1116:0,87,255:33,0 chr2 97285108 . C . PASS END=97285108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr2 97285109 . G . PASS END=97285118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1219:0,102,255:39,0 chr2 97285119 . C . PASS END=97285119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:38,0 chr2 97285120 . A . PASS END=97285266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:38:0,90,1350:0,113,255:40,0 chr2 97285267 . T . PASS END=97285267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1263:0,53,255:28,0 chr2 97285268 . G . PASS END=97285268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:30,0 chr2 97285269 . G . PASS END=97285269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 97285270 . C . PASS END=97285271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:35:0,69,1170:0,69,255:28,0 chr2 97285272 . C . PASS END=97285276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 97285277 . C . PASS END=97285280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 97285281 . C . PASS END=97285281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 97285409 . C . PASS END=97285499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:44:0,93,1623:0,93,255:40,0 chr2 97293790 . T . PASS END=97293821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1194:0,86,255:38,0 chr2 97297049 . C . PASS END=97297221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:32:0,93,1312:0,96,255:40,0 chr2 97297277 . T . PASS END=97297280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,191,255:40,0 chr2 97299900 . T . PASS END=97299915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,198,255:40,0 chr2 97302658 . A . PASS END=97302687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 97302688 . A . PASS END=97302691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr2 97302692 . A . PASS END=97302692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 97302693 . G . PASS END=97302695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,247:6,0 chr2 97302696 . C . PASS END=97302706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr2 97302707 . G . PASS END=97302735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr2 97302736 . C . PASS END=97302739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 97302740 . A . PASS END=97302740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 97302741 . A . PASS END=97302807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr2 97302808 . A . PASS END=97302808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,535:0,12,255:16,0 chr2 97302809 . G . PASS END=97302815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 97302816 . G . PASS END=97302848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:31:12:0,31,441:0,31,255:13,0 chr2 97302849 . C . PASS END=97302855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 97302856 . C . PASS END=97302856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 97302857 . C . PASS END=97302857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 97302858 . A . PASS END=97302862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr2 97302863 . G . PASS END=97302867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:11:0,18,270:0,19,255:6,0 chr2 97302868 . G . PASS END=97302869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 97302870 . C . PASS END=97302872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr2 97308574 . A . PASS END=97308595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,576:0,51,255:18,0 chr2 97308596 . C . PASS END=97308596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 97308597 . G . PASS END=97308625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,684:0,57,255:19,0 chr2 97308626 . T . PASS END=97308626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:15,0 chr2 97308627 . A . PASS END=97308638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 97308639 . C . PASS END=97308658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 97312138 . A . PASS END=97312190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,105,1636:0,105,255:40,0 chr2 97312801 . A . PASS END=97312892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:32:0,89,1186:0,89,255:40,0 chr2 97313515 . A . PASS END=97313622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:37:0,96,1440:0,96,255:40,0 chr2 97313623 . T . PASS END=97313623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:32,0 chr2 97315360 . T . PASS END=97315414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,128,255:40,0 chr2 97315917 . G . PASS END=97315973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,738:0,60,255:22,0 chr2 97315974 . T . PASS END=97315986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:21:0,45,675:0,52,255:20,0 chr2 97315987 . T . PASS END=97315990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:18:0,39,585:0,54,255:13,0 chr2 97315991 . C . PASS END=97315994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 97315995 . G . PASS END=97316010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr2 97316011 . G . PASS END=97316011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 97316012 . C . PASS END=97316026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 97317629 . G . PASS END=97317763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,114,1710:0,141,255:40,0 chr2 97319377 . A . PASS END=97319439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:37:0,93,1342:0,93,255:40,0 chr2 97320183 . G . PASS END=97320233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:51:0,120,1800:0,137,255:40,0 chr2 97326078 . A . PASS END=97326108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,120,1800:0,126,255:40,0 chr2 97327062 . G . PASS END=97327069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 97327070 . C . PASS END=97327117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,778:0,63,255:26,0 chr2 97327118 . G . PASS END=97327138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:29,0 chr2 97327139 . G . PASS END=97327145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 97327146 . T . PASS END=97327155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 97327156 . C . PASS END=97327157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 97327158 . G . PASS END=97327168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 97327169 . C . PASS END=97327177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 97327405 . A . PASS END=97327528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:41:0,93,1438:0,93,255:40,0 chr2 97327533 . G . PASS END=97327535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:48:0,100,1644:0,100,255:40,0 chr2 97327945 . T . PASS END=97328004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:102:0,120,1800:0,240,255:40,0 chr2 97329176 . C . PASS END=97329244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,173,255:40,0 chr2 97334488 . C . PASS END=97334531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,102,1419:0,102,255:40,0 chr2 97334623 . C . PASS END=97334741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,109,1357:0,109,255:40,0 chr2 97334780 . G . PASS END=97334803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,86,255:33,0 chr2 97334804 . G . PASS END=97334804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:29,0 chr2 97334805 . C . PASS END=97334831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1133:0,80,255:30,0 chr2 97334832 . T . PASS END=97334853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr2 97334854 . A . PASS END=97334854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:24,0 chr2 97334855 . G . PASS END=97334863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 97334864 . A . PASS END=97334864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr2 97334865 . A . PASS END=97334874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr2 97335856 . T . PASS END=97335974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:35:0,94,1236:0,94,255:40,0 chr2 97335975 . C . PASS END=97335984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,89,255:26,0 chr2 97338241 . A . PASS END=97338244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr2 97338245 . A . PASS END=97338245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr2 97338246 . A . PASS END=97338246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 97338247 . G . PASS END=97338252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:17,0 chr2 97338253 . G . PASS END=97338253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 97338254 . G . PASS END=97338264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr2 97338265 . C . PASS END=97338270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 97338271 . A . PASS END=97338271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,688:0,44,255:19,0 chr2 97338272 . A . PASS END=97338272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 97338273 . A . PASS END=97338273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 97338274 . C . PASS END=97338289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,754:0,63,255:25,0 chr2 97338290 . A . PASS END=97338290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 97338291 . A . PASS END=97338292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 97338293 . G . PASS END=97338293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,819:0,47,255:22,0 chr2 97338294 . G . PASS END=97338303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,917:0,62,255:26,0 chr2 97338304 . C . PASS END=97338304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:25,0 chr2 97338305 . C . PASS END=97338318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,832:0,61,255:26,0 chr2 97338814 . A . PASS END=97338821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 97338822 . G . PASS END=97338822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 97338823 . A . PASS END=97338976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:31:0,84,1125:0,93,255:40,0 chr2 97338977 . C . PASS END=97338991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,68,255:26,0 chr2 97350064 . G . PASS END=97350185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1164:0,84,255:40,0 chr2 97350186 . C . PASS END=97350187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 97350188 . G . PASS END=97350188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 97351066 . A . PASS END=97351066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 97351067 . A . PASS END=97351067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:31,0 chr2 97351068 . A . PASS END=97351161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1105:0,82,255:38,0 chr2 97351162 . T . PASS END=97351166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 97351677 . G . PASS END=97351680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 97351681 . C . PASS END=97351689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:24,0 chr2 97351690 . T . PASS END=97351690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 97351691 . G . PASS END=97351698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,954:0,75,255:26,0 chr2 97351699 . T . PASS END=97351780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1023:0,80,255:36,0 chr2 97351781 . A . PASS END=97351781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 97351782 . G . PASS END=97351802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,95,255:37,0 chr2 97351803 . G . PASS END=97351808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:28,0 chr2 97351809 . C . PASS END=97351828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,60,255:25,0 chr2 97351829 . A . PASS END=97351835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 97351836 . C . PASS END=97351839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 97351840 . A G, 45.30 PASS DP=23;MQ=249.33;MQRankSum=2.872;ReadPosRankSum=2.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:7,4,0:8,4,0:45:80,0,50,286,533,819:233,0,255:14,0:4.5300e+01,1.4988e-04,5.3000e+01,2.8566e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,11,3,5:8,7,1,7 chr2 97351841 . C . PASS END=97351843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 97351844 . T . PASS END=97351854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 97351932 . C . PASS END=97351942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 97351943 . C . PASS END=97351943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 97351944 . C . PASS END=97351989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,366:0,33,255:12,0 chr2 97351990 . C . PASS END=97352030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:17,0 chr2 97352031 . G . PASS END=97352031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 97352032 . C . PASS END=97352033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 97352034 . G . PASS END=97352034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 97352035 . G . PASS END=97352042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 97352043 . C . PASS END=97352047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 97352048 . C . PASS END=97352048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr2 97352049 . G . PASS END=97352053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97352054 . G . PASS END=97352063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 97352064 . A . PASS END=97352077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 97352078 . C . PASS END=97352087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 97353459 . G . PASS END=97353472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 97353553 . T . PASS END=97353553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97353554 . A . PASS END=97353554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 97353555 . C . PASS END=97353687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:28:0,81,1215:0,81,255:40,0 chr2 97353688 . A . PASS END=97353691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1482:0,107,255:38,0 chr2 97354702 . A . PASS END=97354703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 97354950 . T . PASS END=97354955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 97354956 . A . PASS END=97354956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 97354957 . A . PASS END=97354964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 97354965 . A . PASS END=97354965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 97354966 . A . PASS END=97354968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:17,0 chr2 97354969 . A . PASS END=97354969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 97354970 . T . PASS END=97354975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:18,0 chr2 97354976 . C . PASS END=97354976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 97354977 . C . PASS END=97354994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,706:0,44,255:19,0 chr2 97354995 . C . PASS END=97355009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr2 97355010 . A . PASS END=97355010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 97355011 . A . PASS END=97355033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,717:0,66,255:22,0 chr2 97355034 . A . PASS END=97355037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 97355038 . C . PASS END=97355039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 97355040 . C . PASS END=97355040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr2 97355041 . T . PASS END=97355061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr2 97355062 . C . PASS END=97355105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,582:0,48,255:19,0 chr2 97355106 . C . PASS END=97355113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 97355381 . G . PASS END=97355389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 97355390 . G . PASS END=97355390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr2 97355391 . G . PASS END=97355400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 97355401 . T . PASS END=97355403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97355404 . A . PASS END=97355406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97355407 . A . PASS END=97355408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 97355409 . A . PASS END=97355412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 97355413 . A . PASS END=97355413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr2 97355414 . G . PASS END=97355416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 97355417 . G . PASS END=97355417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 97355418 . C . PASS END=97355421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97355422 . A . PASS END=97355425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 97355426 . G . PASS END=97355426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97355427 . G . PASS END=97355427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 97355428 . T . PASS END=97355432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:30,0 chr2 97355433 . G . PASS END=97355433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:28,0 chr2 97355434 . A . PASS END=97355446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 97355447 . T . PASS END=97355448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97355449 . A . PASS END=97355449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97355450 . C . PASS END=97355467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:26,0 chr2 97355468 . G . PASS END=97355468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 97355469 . C . PASS END=97355475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 97355476 . C . PASS END=97355490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:19,0 chr2 97355491 . A . PASS END=97355495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 97356224 . A . PASS END=97356229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 97356230 . C . PASS END=97356230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 97356231 . A . PASS END=97356324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:29:0,83,1203:0,83,255:40,0 chr2 97356325 . G . PASS END=97356325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 97356326 . G . PASS END=97356326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97356586 . A . PASS END=97356602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,837:0,63,255:25,0 chr2 97356603 . C . PASS END=97356663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1016:0,80,255:34,0 chr2 97356664 . A . PASS END=97356664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1209:0,53,255:30,0 chr2 97356665 . A . PASS END=97356681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1263:0,89,255:34,0 chr2 97356682 . G . PASS END=97356720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,64,255:27,0 chr2 97356721 . C . PASS END=97356735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr2 97356736 . T . PASS END=97356736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 97356927 . G . PASS END=97356998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1039:0,84,255:40,2 chr2 97356999 . A . PASS END=97357003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1445:0,60,255:40,2 chr2 97357004 . T . PASS END=97357063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,88,255:40,0 chr2 97357064 . C . PASS END=97357064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:27,0 chr2 97357065 . A . PASS END=97357067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr2 97357068 . A . PASS END=97357090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,923:0,74,255:26,0 chr2 97357182 . G . PASS END=97357193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr2 97357194 . G . PASS END=97357301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1025:0,84,255:40,0 chr2 97357302 . A . PASS END=97357302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1250:0,59,255:34,0 chr2 97357303 . A . PASS END=97357335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1152:0,86,255:37,0 chr2 97357336 . T . PASS END=97357349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,78,255:26,0 chr2 97357460 . G . PASS END=97357492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr2 97357493 . G . PASS END=97357493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97357494 . A . PASS END=97357497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 97357498 . G . PASS END=97357509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 97357510 . A . PASS END=97357510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr2 97357511 . G . PASS END=97357541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1182:0,83,255:33,0 chr2 97357542 . G . PASS END=97357548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 97357549 . G . PASS END=97357568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 97357569 . A . PASS END=97357569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:26,0 chr2 97357570 . T . PASS END=97357573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97357574 . A . PASS END=97357575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 97357576 . A . PASS END=97357579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97357580 . C . PASS END=97357583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 97357584 . C . PASS END=97357587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97357588 . G . PASS END=97357588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 97357589 . A . PASS END=97357593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 97357594 . A . PASS END=97357594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 97357595 . G . PASS END=97357606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:29,0 chr2 97357607 . A . PASS END=97357607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:27,0 chr2 97357608 . C . PASS END=97357615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 97357616 . T . PASS END=97357640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 97357641 . A . PASS END=97357641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 97357642 . C . PASS END=97357646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 97357647 . A . PASS END=97357648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr2 97357649 . A . PASS END=97357650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 97357651 . G . PASS END=97357683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,692:0,57,255:19,0 chr2 97357684 . C . PASS END=97357686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97357687 . C . PASS END=97357691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 97357692 . C . PASS END=97357692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97357693 . C . PASS END=97357699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 97357700 . A . PASS END=97357700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,645:0,11,255:19,0 chr2 97357841 . A . PASS END=97357842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr2 97357843 . C . PASS END=97357859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1041:0,84,255:31,0 chr2 97357860 . C . PASS END=97357860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 97357861 . T . PASS END=97357866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 97357867 . T . PASS END=97357891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,878:0,75,255:26,0 chr2 97357892 . T . PASS END=97357892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr2 97357893 . G . PASS END=97357901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 97357902 . G . PASS END=97357902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:23,0 chr2 97357903 . A . PASS END=97357911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 97357912 . T . PASS END=97357912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,783:0,25,255:19,0 chr2 97357913 . T . PASS END=97357916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97357917 . A . PASS END=97357917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:19,0 chr2 97357918 . G . PASS END=97357918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97359243 . G . PASS END=97359245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 97359246 . C . PASS END=97359246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr2 97359247 . C . PASS END=97359247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 97359248 . T . PASS END=97359249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:14,0 chr2 97359250 . C . PASS END=97359252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:15,0 chr2 97359253 . T . PASS END=97359254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 97359255 . G . PASS END=97359257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr2 97359258 . T . PASS END=97359258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 97359259 . G . PASS END=97359262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 97359263 . T . PASS END=97359263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr2 97359264 . T . PASS END=97359264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 97359265 . C . PASS END=97359265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 97359266 . C . PASS END=97359266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 97359267 . T . PASS END=97359267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,519:0,9,255:15,0 chr2 97359268 . G . PASS END=97359268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 97359269 . A . PASS END=97359269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 97359270 . A . PASS END=97359270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr2 97359271 . C . PASS END=97359272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 97359273 . A . PASS END=97359278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,688:0,44,255:18,0 chr2 97359279 . A . PASS END=97359279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:18,0 chr2 97359280 . G . PASS END=97359282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr2 97359283 . C . PASS END=97359283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr2 97359284 . A . PASS END=97359284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:17,0 chr2 97359285 . C . PASS END=97359285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 97359286 . C . PASS END=97359286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr2 97359287 . C . PASS END=97359293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,795:0,66,255:23,0 chr2 97359294 . T . PASS END=97359294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr2 97359295 . G . PASS END=97359313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,845:0,69,255:26,0 chr2 97359314 . A . PASS END=97359315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:29,0 chr2 97359316 . A . PASS END=97359316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 97359317 . T . PASS END=97359317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97359318 . G . PASS END=97359318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 97359319 . G . PASS END=97359327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 97359328 . A . PASS END=97359329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 97359330 . T . PASS END=97359331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97359332 . A . PASS END=97359334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr2 97359335 . T . PASS END=97359337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97359338 . C . PASS END=97359338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 97359339 . A . PASS END=97359344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1070:0,84,255:28,0 chr2 97359345 . T . PASS END=97359379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,71,255:26,0 chr2 97359380 . A . PASS END=97359380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:21,0 chr2 97359381 . G . PASS END=97359388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 97359389 . C . PASS END=97359389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 97359390 . T . PASS END=97359390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97359391 . T . PASS END=97359391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr2 97359392 . G . PASS END=97359392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97359393 . T . PASS END=97359393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 97359394 . G . PASS END=97359409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 97359410 . C . PASS END=97359424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 97359648 . G . PASS END=97359660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:19,0 chr2 97359661 . T . PASS END=97359665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr2 97359666 . G . PASS END=97359666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 97359667 . G . PASS END=97359676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 97359677 . G . PASS END=97359691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:29,0 chr2 97359692 . C . PASS END=97359692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 97359693 . T . PASS END=97359745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1086:0,80,255:32,0 chr2 97359746 . A . PASS END=97359746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:28,0 chr2 97359747 . A . PASS END=97359747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 97359748 . A . PASS END=97359748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:28,0 chr2 97359749 . G . PASS END=97359752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 97359753 . T . PASS END=97359754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:28,0 chr2 97359755 . G . PASS END=97359759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 97359760 . A . PASS END=97359784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 97359785 . C . PASS END=97359809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 97360097 . A . PASS END=97360116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,102,1250:0,102,255:36,0 chr2 97360117 . G . PASS END=97360186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:33:0,82,1028:0,82,255:38,0 chr2 97360187 . A . PASS END=97360187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:31,0 chr2 97360188 . G . PASS END=97360196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:33,0 chr2 97360197 . T . PASS END=97360197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:29,0 chr2 97360198 . T . PASS END=97360198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 97360199 . G . PASS END=97360199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:30,0 chr2 97360200 . A . PASS END=97360204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,92,255:30,0 chr2 97360205 . C . PASS END=97360205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 97360206 . T . PASS END=97360210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 97360211 . A . PASS END=97360212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:27,0 chr2 97360213 . G . PASS END=97360213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97360214 . T . PASS END=97360214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:26,0 chr2 97360215 . G . PASS END=97360216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97360217 . G . PASS END=97360221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:27,0 chr2 97360222 . G . PASS END=97360236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr2 97360237 . C . PASS END=97360238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 97360239 . G . PASS END=97360241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 97360242 . G . PASS END=97360246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr2 97360247 . T . PASS END=97360247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:23,0 chr2 97360248 . G . PASS END=97360271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:25,0 chr2 97360272 . T . PASS END=97360275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97360276 . G . PASS END=97360276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 97360277 . G . PASS END=97360278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97360279 . C . PASS END=97360280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 97360281 . T . PASS END=97360285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97360286 . G . PASS END=97360358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,886:0,61,255:26,0 chr2 97360359 . A . PASS END=97360361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr2 97360362 . T . PASS END=97360364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 97360365 . T . PASS END=97360369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 97360879 . G . PASS END=97360896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr2 97360897 . T . PASS END=97360897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,635:0,18,255:18,0 chr2 97360898 . T . PASS END=97360929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr2 97360930 . A . PASS END=97360930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr2 97360931 . G . PASS END=97360946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 97360947 . A . PASS END=97360947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 97361034 . C . PASS END=97361034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 97361246 . A . PASS END=97361257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 97361258 . G . PASS END=97361258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr2 97361259 . G . PASS END=97361285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:26,0 chr2 97361286 . C . PASS END=97361300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 97361301 . T . PASS END=97361301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 97361302 . G . PASS END=97361309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr2 97361310 . G . PASS END=97361373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,67,255:26,0 chr2 97361374 . T . PASS END=97361398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,56,255:20,0 chr2 97361479 . C . PASS END=97361479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 97361480 . T . PASS END=97361480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 97361481 . C . PASS END=97361497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:19,0 chr2 97361498 . C . PASS END=97361552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:26,0 chr2 97361553 . G . PASS END=97361602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1086:0,84,255:32,0 chr2 97361603 . A . PASS END=97361603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1133:0,55,255:28,0 chr2 97361604 . C . PASS END=97361613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 97361614 . C . PASS END=97361617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 97361618 . A . PASS END=97361618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,862:0,18,255:23,0 chr2 97361619 . C . PASS END=97361623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 97361624 . T . PASS END=97361630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 97361631 . A . PASS END=97361633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 97361634 . G . PASS END=97361635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97361636 . T . PASS END=97361641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 97361789 . C . PASS END=97361814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,115,1495:0,115,255:40,0 chr2 97363263 . T . PASS END=97363313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1296:0,92,255:37,0 chr2 97363397 . G . PASS END=97363471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:37:0,93,1329:0,93,255:40,0 chr2 97363472 . A . PASS END=97363472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:33,0 chr2 97363473 . A . PASS END=97363494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:31:0,87,1305:0,92,255:34,0 chr2 97363495 . C . PASS END=97363495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 97363496 . A . PASS END=97363498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 97363774 . G . PASS END=97363775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 97363776 . G . PASS END=97363776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97363777 . T . PASS END=97363777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 97363778 . A . PASS END=97363803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1116:0,80,255:31,0 chr2 97363804 . G . PASS END=97363804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr2 97363805 . C . PASS END=97363834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:33,0 chr2 97363835 . C . PASS END=97363835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 97363836 . C . PASS END=97363843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97363844 . T . PASS END=97363844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:27,0 chr2 97363845 . C . PASS END=97363845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 97363846 . T . PASS END=97363846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 97363847 . A . PASS END=97363863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 97363864 . T . PASS END=97363876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 97363877 . T . PASS END=97363877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:19,0 chr2 97363878 . G . PASS END=97363889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr2 97363890 . C . PASS END=97363893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 97364408 . G . PASS END=97364418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,501:0,45,255:18,0 chr2 97364419 . C . PASS END=97364444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:24,0 chr2 97364445 . A . PASS END=97364449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,920:0,84,255:28,0 chr2 97364450 . C . PASS END=97364450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 97364451 . C . PASS END=97364451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 97364452 . A . PASS END=97364454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,858:0,67,255:27,0 chr2 97364455 . G . PASS END=97364455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 97364456 . C . PASS END=97364456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 97364457 . C . PASS END=97364463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,952:0,84,255:28,0 chr2 97364464 . G . PASS END=97364464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 97364465 . C . PASS END=97364468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,944:0,84,255:29,0 chr2 97364469 . T . PASS END=97364469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,903:0,70,255:28,0 chr2 97364470 . C . PASS END=97364474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 97364475 . T . PASS END=97364475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:28,0 chr2 97364476 . T . PASS END=97364476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 97364477 . T . PASS END=97364477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 97364478 . G . PASS END=97364485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr2 97364486 . A . PASS END=97364486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1005:0,71,255:27,0 chr2 97364487 . G . PASS END=97364487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:27,0 chr2 97364488 . A . PASS END=97364489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 97364490 . A . PASS END=97364490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,886:0,54,255:25,0 chr2 97364491 . G . PASS END=97364497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 97364498 . C . PASS END=97364498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 97364499 . C . PASS END=97364501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 97364502 . A . PASS END=97364502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 97364503 . G . PASS END=97364503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 97364504 . C . PASS END=97364505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 97364506 . G . PASS END=97364515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1139:0,80,255:29,0 chr2 97364516 . C . PASS END=97364526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,76,255:26,0 chr2 97364527 . G . PASS END=97364527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:24,0 chr2 97364528 . G . PASS END=97364540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 97364541 . A . PASS END=97364541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:23,0 chr2 97364542 . C . PASS END=97364548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr2 97364549 . C . PASS END=97364550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 97364551 . C . PASS END=97364569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 97364782 . T . PASS END=97364873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,125,255:40,0 chr2 97365287 . G . PASS END=97365433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:32:0,82,1087:0,82,255:40,0 chr2 97365434 . T . PASS END=97365434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:34,0 chr2 97365435 . G . PASS END=97365457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1260:0,96,255:35,0 chr2 97365669 . G . PASS END=97365772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:31:0,84,1260:0,89,255:40,0 chr2 97365773 . A . PASS END=97365774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 97365775 . G . PASS END=97365775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 97365776 . C . PASS END=97365776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 97365777 . T . PASS END=97365784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr2 97365785 . A . PASS END=97365786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 97365787 . A . PASS END=97365810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:29,0 chr2 97365811 . A . PASS END=97365811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 97365812 . G . PASS END=97365817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:29,0 chr2 97366069 . A . PASS END=97366082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:32,0 chr2 97366083 . A . PASS END=97366083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr2 97366084 . C . PASS END=97366115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1149:0,80,255:33,0 chr2 97366116 . C . PASS END=97366116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:33,0 chr2 97366117 . T . PASS END=97366165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,98,255:38,0 chr2 97366166 . G . PASS END=97366185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:26,0 chr2 97366186 . A . PASS END=97366208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 97367692 . G . PASS END=97367700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:30,0 chr2 97367701 . C . PASS END=97367701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr2 97367702 . A . PASS END=97367780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,996:0,83,255:35,0 chr2 97368016 . C . PASS END=97368138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:33:0,83,1140:0,83,255:40,0 chr2 97368337 . G . PASS END=97368478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:40:0,93,1395:0,104,255:40,0 chr2 97368715 . G . PASS END=97368814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,120,1800:0,122,255:40,0 chr2 97368890 . G . PASS END=97368940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1156:0,83,255:33,0 chr2 97368941 . A . PASS END=97368941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:26,0 chr2 97368942 . G . PASS END=97368951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1202:0,86,255:32,0 chr2 97368952 . A . PASS END=97368952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr2 97368953 . T . PASS END=97368983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1194:0,86,255:34,0 chr2 97368984 . C . PASS END=97368984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1235:0,77,255:33,0 chr2 97368985 . T . PASS END=97369006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1250:0,91,255:35,0 chr2 97369007 . T . PASS END=97369007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1158:0,39,255:31,0 chr2 97369008 . C . PASS END=97369064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1174:0,83,255:35,0 chr2 97369065 . T . PASS END=97369065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 97369066 . G . PASS END=97369070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 97369071 . A . PASS END=97369072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,964:0,51,255:29,0 chr2 97369073 . G . PASS END=97369073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 97369074 . G . PASS END=97369074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 97369075 . C . PASS END=97369079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr2 97369080 . G . PASS END=97369080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr2 97369081 . T . PASS END=97369083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 97369260 . G . PASS END=97369369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:42:0,93,1465:0,93,255:40,0 chr2 97369952 . A . PASS END=97370099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:44:0,120,1800:0,125,255:40,0 chr2 97370205 . C . PASS END=97370429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:37:0,81,1205:0,81,255:40,0 chr2 97372993 . T . PASS END=97373135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:41:0,111,1665:0,123,255:40,0 chr2 97373451 . T . PASS END=97373570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:46:0,120,1800:0,127,255:40,0 chr2 97377393 . C . PASS END=97377507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,105,1552:0,105,255:40,0 chr2 97377601 . C . PASS END=97377601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 97377602 . G . PASS END=97377707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1202:0,86,255:39,0 chr2 97377708 . G . PASS END=97377709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:63:34:0,63,1169:0,63,255:29,0 chr2 97377710 . T . PASS END=97377735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:31,0 chr2 97377736 . C . PASS END=97377745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:28:0,66,990:0,71,255:24,0 chr2 97377746 . A . PASS END=97377746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:20,0 chr2 97377747 . T . PASS END=97377749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,65,255:22,0 chr2 97377750 . A . PASS END=97377752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:20,0 chr2 97377753 . G . PASS END=97377753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97377754 . G . PASS END=97377754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:18,0 chr2 97377755 . A . PASS END=97377761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 97377762 . G . PASS END=97377762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 97378844 . C . PASS END=97378876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:39:0,88,1402:0,88,255:40,0 chr2 97399256 . C . PASS END=97399264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,166,255:40,0 chr2 97399265 . C . PASS END=97399265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:52:60:0,52,1816:0,52,255:40,0 chr2 97399266 . T . PASS END=97399338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,164,255:40,0 chr2 97400146 . C . PASS END=97400263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:36:0,87,1305:0,88,255:40,0 chr2 97402937 . T . PASS END=97402954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:37:0,93,1388:0,98,255:36,0 chr2 97403686 . C . PASS END=97403801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:38:0,81,1215:0,114,255:40,0 chr2 97403802 . C . PASS END=97403803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 97403804 . C . PASS END=97403804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr2 97405591 . C . PASS END=97405620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,637:0,41,255:18,0 chr2 97405621 . G . PASS END=97405634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 97405635 . A . PASS END=97405636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 97405637 . C . PASS END=97405662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,870:0,69,255:26,0 chr2 97405663 . G . PASS END=97405664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 97405665 . C . PASS END=97405668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 97405669 . G . PASS END=97405740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1131:0,83,255:37,0 chr2 97405741 . G . PASS END=97405741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 97405742 . C . PASS END=97405769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1041:0,80,255:31,0 chr2 97405770 . G . PASS END=97405770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:26,0 chr2 97405771 . C . PASS END=97405772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97405773 . G . PASS END=97405777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr2 97426647 . C . PASS END=97426647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 97426723 . A . LowDepth END=97426723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr2 97426737 . A . LowDepth END=97426778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr2 97426779 . G . PASS END=97426787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:5,0 chr2 97426788 . C . PASS END=97426791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 97426792 . T . PASS END=97426792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 97426793 . C . PASS END=97426822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr2 97426823 . G . PASS END=97426849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:19,0 chr2 97426850 . G . PASS END=97426864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,806:0,63,255:26,0 chr2 97426865 . G . PASS END=97426883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:30,0 chr2 97426884 . A . PASS END=97426884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,928:0,51,255:29,0 chr2 97426885 . G . PASS END=97426931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1094:0,90,255:32,0 chr2 97426932 . A . PASS END=97426933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 97426934 . C . PASS END=97426937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 97426938 . G . PASS END=97426939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:27,0 chr2 97426940 . G . PASS END=97426956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:31,0 chr2 97426957 . T . PASS END=97426957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 97426958 . G . PASS END=97426983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 97426984 . T . PASS END=97427014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,840:0,61,255:26,0 chr2 97427015 . C . PASS END=97427017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97427018 . C . PASS END=97427018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 97427019 . G . PASS END=97427035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:30,0 chr2 97427036 . G . PASS END=97427036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr2 97427037 . A . PASS END=97427037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:27,0 chr2 97427038 . C . PASS END=97427043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:28,0 chr2 97427044 . A . PASS END=97427078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,901:0,62,255:26,0 chr2 97427079 . C . PASS END=97427079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 97427080 . T . PASS END=97427088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr2 97427089 . A . PASS END=97427089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,758:0,39,255:20,0 chr2 97427090 . G . PASS END=97427091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 97427092 . A . PASS END=97427092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 97427093 . G . PASS END=97427099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr2 97427100 . A . PASS END=97427100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 97427101 . A . PASS END=97427149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,811:0,61,255:25,0 chr2 97427150 . C . PASS END=97427151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,775:0,50,255:19,0 chr2 97427152 . T . PASS END=97427156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 97427157 . A . PASS END=97427158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 97427159 . G . PASS END=97427163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr2 97427164 . A . PASS END=97427164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 97427165 . G . PASS END=97427167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 97427168 . C . PASS END=97427174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,836:0,53,255:19,0 chr2 97427175 . C . PASS END=97427178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr2 97427179 . A . PASS END=97427200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:19:0,41,659:0,41,255:19,0 chr2 97427201 . G . PASS END=97427207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 97427208 . G . PASS END=97427214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 97427215 . G . PASS END=97427241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:22,0 chr2 97427242 . T . PASS END=97427242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 97427243 . G . PASS END=97427244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 97427245 . T . PASS END=97427245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 97427246 . C . PASS END=97427278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,823:0,66,255:24,0 chr2 97427279 . T . PASS END=97427279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr2 97427280 . C . PASS END=97427304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:22,0 chr2 97427305 . C . PASS END=97427329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,637:0,51,255:18,0 chr2 97427330 . A . PASS END=97427330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 97427331 . T . PASS END=97427380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,43,255:18,0 chr2 97427381 . C . PASS END=97427384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 97427385 . G . PASS END=97427409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 97427410 . A . PASS END=97427410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:17,0 chr2 97427411 . G . PASS END=97427414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 97427415 . C . PASS END=97427429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 97427430 . A . PASS END=97427430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 97427431 . T . PASS END=97427456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr2 97427457 . T . PASS END=97427457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 97427458 . A . PASS END=97427458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 97427459 . C . PASS END=97427459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 97427460 . C . PASS END=97427467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,847:0,69,255:23,0 chr2 97427468 . C . PASS END=97427468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 97427469 . T . PASS END=97427476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:23:0,62,825:0,62,255:26,0 chr2 97427477 . C . PASS END=97427479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 97427480 . A . PASS END=97427492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:27,0 chr2 97427493 . G . PASS END=97427494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 97427495 . C . PASS END=97427495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 97427496 . A . PASS END=97427498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,974:0,84,255:28,0 chr2 97427499 . A . PASS END=97427499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 97427500 . C . PASS END=97427500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 97427501 . C . PASS END=97427505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 97427506 . T . PASS END=97427508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 97427509 . C . PASS END=97427510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 97427511 . A . PASS END=97427511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97427512 . T . PASS END=97427512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 97427513 . C . PASS END=97427514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 97427515 . T . PASS END=97427515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:27,0 chr2 97427516 . T . PASS END=97427524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr2 97427525 . C . PASS END=97427534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 97427535 . T . PASS END=97427535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:25,0 chr2 97427536 . C . PASS END=97427588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1108:0,86,255:32,0 chr2 97427589 . A . PASS END=97427589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1003:0,66,255:27,0 chr2 97427590 . T . PASS END=97428057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1155:0,80,255:40,0 chr2 97428058 . T . PASS END=97428058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:39,0 chr2 97428059 . C . PASS END=97428086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,106,1377:0,106,255:40,0 chr2 97428087 . T . PASS END=97428087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1092:0,69,255:33,0 chr2 97428088 . T . PASS END=97428128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1197:0,83,255:35,0 chr2 97428129 . T . PASS END=97428129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,951:0,65,255:29,0 chr2 97428130 . T . PASS END=97428138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr2 97438973 . C . PASS END=97439000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,100,1706:0,100,255:40,0 chr2 97439001 . A T, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.755;ReadPosRankSum=4.108;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,28,0:0.596,0.000:47:8,16,0:11,12,0:47:85,0,47,972,680,1652:255,0,255:19,0:5.0000e+01,8.7754e-05,4.9917e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,14,14:10,9,18,10 chr2 97439002 . G . PASS END=97439037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,111,1665:0,124,255:40,0 chr2 97462749 . G . PASS END=97462749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 97462750 . G . PASS END=97462750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 97462751 . A . PASS END=97462752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 97462753 . G . PASS END=97462753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 97462754 . T . PASS END=97462765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,756:0,66,255:26,0 chr2 97462766 . A . PASS END=97462778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:28,0 chr2 97462779 . T . PASS END=97462779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 97462780 . A . PASS END=97462780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 97462781 . A . PASS END=97462781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 97462782 . A . PASS END=97462838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,971:0,84,255:32,0 chr2 97462839 . A . PASS END=97462839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 97462840 . C . PASS END=97462841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97462842 . T . PASS END=97462842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 97462843 . G . PASS END=97462843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97462844 . A . PASS END=97462844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 97462845 . T . PASS END=97462846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 97462847 . G . PASS END=97462848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 97462849 . G . PASS END=97462858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 97462859 . A . PASS END=97462881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,900:0,68,255:27,0 chr2 97462882 . C . PASS END=97462892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:22:0,48,720:0,66,255:17,0 chr2 97463249 . G . PASS END=97463250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 97463251 . T . PASS END=97463259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 97463260 . A . PASS END=97463261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:17,0 chr2 97463262 . G . PASS END=97463273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,717:0,63,255:22,0 chr2 97463274 . T . PASS END=97463274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr2 97463275 . G . PASS END=97463276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 97463277 . C . PASS END=97463277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 97463278 . T . PASS END=97463281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr2 97463282 . A . PASS END=97463282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr2 97463283 . A . PASS END=97463284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:25,0 chr2 97463285 . A . PASS END=97463285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 97463286 . A . PASS END=97463294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,864:0,62,255:25,0 chr2 97463295 . A . PASS END=97463295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:21,0 chr2 97463296 . C . PASS END=97463300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:24,0 chr2 97463301 . C . PASS END=97463301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr2 97463302 . T . PASS END=97463307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr2 97463308 . C . PASS END=97463310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 97463311 . G . PASS END=97463311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr2 97463312 . G . PASS END=97463320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1064:0,90,255:31,0 chr2 97463321 . A . PASS END=97463321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,873:0,24,255:28,0 chr2 97463322 . A . PASS END=97463322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr2 97463323 . T . PASS END=97463329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 97463330 . A . PASS END=97463332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1008:0,76,255:30,0 chr2 97463333 . G . PASS END=97463336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr2 97463337 . A . PASS END=97463337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:31,0 chr2 97463338 . A . PASS END=97463357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1148:0,80,255:32,0 chr2 97463358 . T . PASS END=97463359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1086:0,77,255:27,0 chr2 97463360 . G . PASS END=97463362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 97463363 . G . PASS END=97463363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr2 97463364 . C . PASS END=97463364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 97463365 . T . PASS END=97463365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 97463366 . C . PASS END=97463370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 97463371 . C . PASS END=97463371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 97463372 . T . PASS END=97463381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:29,0 chr2 97463382 . C . PASS END=97463384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,71,255:24,0 chr2 97463388 . G . PASS END=97463388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:23,0 chr2 97464793 . G . PASS END=97464959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:28:0,80,1078:0,80,255:40,0 chr2 97464960 . G . PASS END=97464963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:25,0 chr2 97465289 . G . PASS END=97465291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 97465292 . A . LowGQ END=97465292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,729:3,0,255:21,0 chr2 97465293 . A . PASS END=97465294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1022:0,68,255:26,0 chr2 97465295 . G . PASS END=97465353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1155:0,80,255:36,0 chr2 97465354 . T . PASS END=97465354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 97465355 . G . PASS END=97465361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 97465362 . T . PASS END=97465362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 97465363 . G . PASS END=97465380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:28,0 chr2 97465381 . C . PASS END=97465385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 97466809 . T . PASS END=97466821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 97466822 . G . PASS END=97466822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 97466823 . G . PASS END=97466832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:21,0 chr2 97466833 . C . PASS END=97466839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 97466840 . C . PASS END=97466843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97466844 . C . PASS END=97466845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 97466846 . G . PASS END=97466847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97466848 . A . PASS END=97466849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 97466850 . T . PASS END=97466871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr2 97468483 . A . PASS END=97468505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,754:0,66,255:26,0 chr2 97468506 . G . PASS END=97468527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1218:0,96,255:37,0 chr2 97468528 . G . PASS END=97468528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr2 97468529 . G . PASS END=97468574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:37:0,85,1395:0,85,255:40,0 chr2 97474298 . A . PASS END=97474298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 97474299 . C . PASS END=97474306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:19,0 chr2 97474307 . C . PASS END=97474324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,792:0,63,255:26,0 chr2 97474325 . T . PASS END=97474330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 97474331 . G . PASS END=97474331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 97474332 . C . PASS END=97474336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 97474337 . C . PASS END=97474337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr2 97474338 . C . PASS END=97474346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:30,0 chr2 97474347 . T . PASS END=97474347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 97474348 . T . PASS END=97474404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1125:0,80,255:34,0 chr2 97474405 . T . PASS END=97474405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1062:0,79,255:30,0 chr2 97474406 . T . PASS END=97474430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1149:0,82,255:31,0 chr2 97474431 . C . PASS END=97474468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,61,255:26,0 chr2 97474469 . A . PASS END=97474479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,723:0,49,255:18,0 chr2 97474484 . G . PASS END=97474484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 97474969 . C . PASS END=97474986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr2 97474987 . T . PASS END=97474987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 97474988 . T . PASS END=97475054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,848:0,61,255:26,0 chr2 97475055 . A . PASS END=97475055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 97475056 . G . PASS END=97475065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 97475066 . C . PASS END=97475066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 97475067 . A . PASS END=97475070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 97475071 . G . PASS END=97475071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr2 97475072 . T . PASS END=97475073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 97475074 . C . PASS END=97475074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 97475075 . C . PASS END=97475075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 97475076 . A . PASS END=97475076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 97475077 . G . PASS END=97475077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 97475078 . A . PASS END=97475078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 97475079 . A . PASS END=97475079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 97475080 . C . PASS END=97475081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:22,0 chr2 97475082 . G . PASS END=97475092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,869:0,69,255:23,0 chr2 97475093 . T . PASS END=97475093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,748:0,33,255:19,0 chr2 97475094 . C . PASS END=97475098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 97475099 . A . PASS END=97475099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 97475100 . T . PASS END=97475113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 97475114 . C . PASS END=97475124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 97475125 . A . PASS END=97475125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 97475126 . G . PASS END=97475136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:30,0 chr2 97475137 . C . PASS END=97475138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 97475139 . C . PASS END=97475139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97475140 . C . PASS END=97475143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1108:0,74,255:26,0 chr2 97475144 . A . PASS END=97475149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 97475150 . A . PASS END=97475150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,871:0,53,255:26,0 chr2 97475151 . A . PASS END=97475154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 97475155 . G . PASS END=97475161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr2 97475162 . A . PASS END=97475164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 97475165 . T . PASS END=97475165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr2 97475166 . C . PASS END=97475188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1102:0,83,255:31,0 chr2 97475189 . A . PASS END=97475189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:28,0 chr2 97475190 . C . PASS END=97475198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 97475199 . T . PASS END=97475199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 97475200 . T . PASS END=97475201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 97475202 . T . PASS END=97475203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 97475204 . A . PASS END=97475204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97475205 . A . PASS END=97475205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97475206 . C . PASS END=97475206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97475207 . G . PASS END=97475208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 97475209 . G . PASS END=97475209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97475210 . C . PASS END=97475242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 97475243 . A . PASS END=97475254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr2 97475443 . G . PASS END=97475443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 97475456 . T . PASS END=97475456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97475458 . G . PASS END=97475458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 97475506 . G . PASS END=97475506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 97475540 . A . PASS END=97475540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 97475618 . A . PASS END=97475618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 97475729 . C . PASS END=97475729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr2 97475733 . C . PASS END=97475733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 97475891 . T . PASS END=97475891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 97476007 . G . PASS END=97476007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 97476178 . G . PASS END=97476178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 97476299 . T . PASS END=97476299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 97476313 . T . PASS END=97476313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97476380 . G . PASS END=97476380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 97476412 . C . PASS END=97476412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 97476616 . G . PASS END=97476616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 97476684 . G . PASS END=97476684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 97476771 . G . PASS END=97476771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 97476819 . C . PASS END=97476819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 97477008 . G . PASS END=97477008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 97477090 . C . PASS END=97477090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 97477178 . G . PASS END=97477178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97477191 . G . PASS END=97477191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 97477375 . G . PASS END=97477375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:30,0 chr2 97477507 . T . PASS END=97477507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 97482015 . A . PASS END=97482030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,94:3,0 chr2 97482031 . C . PASS END=97482052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr2 97482053 . G . PASS END=97482100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 97482101 . G . PASS END=97482104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 97482105 . C . PASS END=97482105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr2 97482106 . C . PASS END=97482107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 97482108 . C . PASS END=97482108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 97482109 . G . PASS END=97482123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr2 97482124 . G . PASS END=97482125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 97482126 . C . PASS END=97482146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,459:0,39,255:13,0 chr2 97482147 . G . PASS END=97482150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 97482151 . C . PASS END=97482222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,449:0,36,255:13,0 chr2 97482223 . G . PASS END=97482223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr2 97482224 . C . PASS END=97482233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,405:0,36,255:12,0 chr2 97482234 . A . PASS END=97482249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr2 97482250 . T . PASS END=97482269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:5:0,11,180:0,11,194:5,0 chr2 97482270 . T . PASS END=97482274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr2 97482275 . G . PASS END=97482294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 97482295 . C . LowDepth;LowGQ END=97482677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr2 97482678 . G . PASS END=97482696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr2 97482697 . G . PASS END=97482720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 97482721 . G . LowGQ END=97482721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:6,0 chr2 97482722 . A . PASS END=97482724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:8:0,11,270:0,11,255:7,0 chr2 97482725 . G . PASS END=97482732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 97482733 . C . PASS END=97482783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr2 97482784 . G . PASS END=97482797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 97482798 . G . PASS END=97482805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,247:6,0 chr2 97482806 . G . PASS END=97482808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,255:3,0 chr2 97482809 . C . PASS END=97482831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr2 97482832 . T . LowGQ END=97482832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,110:3,0 chr2 97482833 . G . PASS END=97482836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr2 97482837 . C . PASS END=97482839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 97482840 . C . PASS END=97482851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:4,0 chr2 97482852 . G . LowGQ END=97482852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr2 97482853 . C . PASS END=97482863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:5,0 chr2 97482864 . G . LowGQ END=97482864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 97482865 . G . PASS END=97482905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,127:0,15,127:5,0 chr2 97482906 . G . LowGQ END=97482906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 97482907 . G . PASS END=97482910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 97482911 . C . PASS END=97482926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,243:0,24,243:8,0 chr2 97482927 . A . PASS END=97482927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:6,0 chr2 97482928 . G . PASS END=97482931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 97482932 . G . PASS END=97482932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 97482933 . G . PASS END=97482947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 97482948 . C . PASS END=97482950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 97482951 . A . PASS END=97482951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 97482952 . C . PASS END=97482953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 97482954 . G . PASS END=97482964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr2 97482965 . G . PASS END=97482990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr2 97482991 . T . PASS END=97482995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 97482996 . G . PASS END=97482997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97482998 . C . PASS END=97483027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,620:0,48,255:18,0 chr2 97483028 . G . PASS END=97483042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr2 97483043 . G . PASS END=97483043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 97483044 . A . PASS END=97483135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,66,255:26,0 chr2 97483136 . A . PASS END=97483136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr2 97483137 . G . PASS END=97483161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 97483162 . C . PASS END=97483165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 97483166 . T . PASS END=97483229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:26,0 chr2 97483230 . T . PASS END=97483230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 97483231 . T . PASS END=97483238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,829:0,69,255:23,0 chr2 97483239 . G . PASS END=97483239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 97490795 . G . PASS END=97490802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 97490803 . C . PASS END=97490817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,830:0,80,255:28,0 chr2 97490818 . C . PASS END=97490818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 97490819 . A . PASS END=97490820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1031:0,84,255:30,0 chr2 97490821 . A . PASS END=97490821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 97490822 . A . PASS END=97490825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:30,0 chr2 97490826 . G . PASS END=97490826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr2 97490827 . A . PASS END=97490827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:30,0 chr2 97490828 . A . PASS END=97490828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1011:0,66,255:30,0 chr2 97490829 . C . PASS END=97490851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1218:0,89,255:36,0 chr2 97490852 . T . PASS END=97490852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:35,0 chr2 97490853 . C . PASS END=97490904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1141:0,80,255:36,0 chr2 97490905 . A . PASS END=97490934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,65,255:26,0 chr2 97490935 . T . PASS END=97490938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 97492570 . G . PASS END=97492574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,936:0,87,255:29,0 chr2 97492575 . A . PASS END=97492575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,917:0,32,255:27,0 chr2 97492576 . C . PASS END=97492663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1117:0,83,255:34,0 chr2 97492664 . T . PASS END=97492664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 97492665 . A . PASS END=97492669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,93,255:32,0 chr2 97492670 . A . PASS END=97492670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:30,0 chr2 97492671 . A . PASS END=97492674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 97492675 . T . PASS END=97492675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr2 97492676 . C . PASS END=97492683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:29,0 chr2 97492684 . A . PASS END=97492709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,870:0,61,255:26,0 chr2 97492710 . C . PASS END=97492719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr2 97493468 . A . PASS END=97493468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr2 97493469 . A . PASS END=97493473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:76:27:0,76,1064:0,76,255:29,0 chr2 97493474 . A . PASS END=97493476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 97493477 . T . PASS END=97493477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr2 97493478 . A . PASS END=97493489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr2 97493490 . G . PASS END=97493490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 97493491 . C . PASS END=97493577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:30:0,90,1155:0,90,255:38,0 chr2 97493578 . A . PASS END=97493578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr2 97493579 . C . PASS END=97493584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1440:0,111,255:36,0 chr2 97493585 . A . PASS END=97493612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr2 97493613 . G . PASS END=97493618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 97493619 . C . PASS END=97493619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:17,0 chr2 97493620 . T . PASS END=97493623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 97493624 . T . PASS END=97493624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 97493625 . T . PASS END=97493625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr2 97493626 . C . PASS END=97493630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 97493631 . C . PASS END=97493637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:17,0 chr2 97493836 . G . PASS END=97493839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:26,0 chr2 97493840 . G . PASS END=97493843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,971:0,84,255:28,0 chr2 97493844 . T . PASS END=97493844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 97493845 . G . PASS END=97493846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 97493847 . A . PASS END=97493847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,927:0,53,255:26,0 chr2 97493848 . G . PASS END=97493850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97493851 . G . PASS END=97493856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97493857 . G . PASS END=97493857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97493858 . G . PASS END=97493858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 97493859 . G . PASS END=97493860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 97493861 . A . PASS END=97493861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 97493862 . A . PASS END=97493862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:24,0 chr2 97493863 . G . PASS END=97493863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:24,0 chr2 97493864 . A . PASS END=97493864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:24,0 chr2 97493865 . G . PASS END=97493870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 97493871 . G . PASS END=97493875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1017:0,87,255:29,0 chr2 97493876 . T . PASS END=97493876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 97493877 . T . PASS END=97493886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97493887 . G . PASS END=97493887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 97493888 . C . PASS END=97493905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 97493906 . T . PASS END=97493906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:26,0 chr2 97493907 . G . PASS END=97493908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97493909 . C . PASS END=97493932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,939:0,64,255:26,0 chr2 97494304 . T . PASS END=97494304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:23,0 chr2 97494305 . T . PASS END=97494307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 97494308 . C . PASS END=97494308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 97494309 . C . PASS END=97494314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,925:0,64,255:26,0 chr2 97494315 . C . PASS END=97494315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr2 97494316 . C . PASS END=97494325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 97494326 . G . PASS END=97494355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1172:0,87,255:34,0 chr2 97494356 . C . PASS END=97494356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr2 97494357 . G . PASS END=97494367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:34,0 chr2 97494368 . C . PASS END=97494368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr2 97494369 . G . PASS END=97494387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:34,0 chr2 97494388 . A . PASS END=97494398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 97494399 . T . PASS END=97494399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:23,0 chr2 97494400 . A . PASS END=97494404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:24,0 chr2 97494405 . G . PASS END=97494405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 97494406 . T . PASS END=97494407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 97494408 . A . PASS END=97494408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 97494409 . G . PASS END=97494411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 97494412 . C . PASS END=97494412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 97494413 . G . PASS END=97494413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97494414 . C . PASS END=97494437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,676:0,54,255:20,0 chr2 97494733 . G . PASS END=97494871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1070:0,84,255:40,0 chr2 97497706 . C . PASS END=97497755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:65:0,120,1800:0,157,255:40,0 chr2 97498289 . G . PASS END=97498294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1263:0,86,255:34,0 chr2 97498295 . G . PASS END=97498295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 97498296 . C . PASS END=97498339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:36:0,98,1373:0,98,255:40,0 chr2 97498340 . A . PASS END=97498340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:33,0 chr2 97498341 . C . PASS END=97498353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1278:0,89,255:35,0 chr2 97502681 . C . PASS END=97502733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:100:0,120,1800:0,255,255:40,0 chr2 97505286 . T . PASS END=97505296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:23,0 chr2 97505297 . T . PASS END=97505297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 97505298 . G . PASS END=97505349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,839:0,62,255:26,0 chr2 97505350 . T . PASS END=97505350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 97505351 . C . PASS END=97505362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr2 97505363 . G . PASS END=97505371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 97505372 . T . PASS END=97505381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 97505464 . C . PASS END=97505488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,668:0,51,255:19,0 chr2 97505489 . C . PASS END=97505490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 97505491 . A . PASS END=97505493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 97505494 . G . PASS END=97505496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97505497 . C . PASS END=97505523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,674:0,44,255:19,0 chr2 97505524 . G . PASS END=97505524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 97505525 . C . PASS END=97505533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr2 97505534 . A . PASS END=97505534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:13,0 chr2 97505535 . C . PASS END=97505538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 97505539 . C . PASS END=97505554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 97505555 . T . PASS END=97505555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,394:0,9,255:10,0 chr2 97505556 . C . PASS END=97505562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 97505734 . C . PASS END=97505816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1202:0,86,255:40,1 chr2 97505817 . G . PASS END=97505817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:30,0 chr2 97505818 . G . PASS END=97505832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1177:0,80,255:30,0 chr2 97505969 . C . PASS END=97505969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 97505970 . T . PASS END=97505970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 97505971 . T . PASS END=97505983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,735:0,47,255:19,0 chr2 97505984 . G . PASS END=97505984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97505985 . A . PASS END=97505985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 97505986 . C . PASS END=97505993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:23,0 chr2 97505994 . C . PASS END=97505994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 97505995 . C . PASS END=97506065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,803:0,61,255:25,0 chr2 97506066 . A . PASS END=97506066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 97506067 . G . PASS END=97506067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 97506153 . C . PASS END=97506155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97506156 . G . PASS END=97506156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97506157 . T . PASS END=97506157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,884:0,37,255:24,0 chr2 97506158 . C . PASS END=97506158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 97506159 . T . PASS END=97506159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 97506160 . C . PASS END=97506227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1078:0,80,255:32,0 chr2 97506228 . C . PASS END=97506246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:22:0,60,900:0,66,255:22,0 chr2 97506247 . T . PASS END=97506251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 97506524 . C . PASS END=97506525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97506526 . T . PASS END=97506526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 97506527 . G . PASS END=97506540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,717:0,63,255:26,0 chr2 97506541 . G . PASS END=97506600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:32,0 chr2 97506601 . T . PASS END=97506601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 97506602 . C . PASS END=97506616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 97506617 . G . PASS END=97506640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 97506641 . G . PASS END=97506649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,798:0,50,255:19,0 chr2 97507797 . C . PASS END=97507922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1215:0,89,255:40,0 chr2 97508102 . T . PASS END=97508104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,504:0,21,255:16,0 chr2 97508105 . C . PASS END=97508106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 97508107 . T . PASS END=97508107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 97508108 . C . PASS END=97508108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr2 97508109 . T . PASS END=97508109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 97508110 . T . PASS END=97508115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,589:0,54,255:18,0 chr2 97508116 . C . PASS END=97508116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 97508117 . T . PASS END=97508117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr2 97508118 . T . PASS END=97508119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 97508120 . T . PASS END=97508120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 97508121 . T . PASS END=97508121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 97508122 . C . PASS END=97508122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 97508123 . C . PASS END=97508125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 97508126 . T . PASS END=97508126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 97508127 . T . PASS END=97508127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 97508128 . T . PASS END=97508128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:17,0 chr2 97508129 . C . PASS END=97508129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 97508130 . A . PASS END=97508132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 97508133 . T . PASS END=97508134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,528:0,37,255:17,0 chr2 97508135 . C . PASS END=97508136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 97508137 . C . PASS END=97508137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 97508138 . C . PASS END=97508139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 97508140 . G . PASS END=97508140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr2 97508141 . G . PASS END=97508141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 97508142 . G . PASS END=97508150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,895:0,67,255:26,0 chr2 97508151 . T . PASS END=97508151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,726:0,39,255:24,0 chr2 97508152 . C . PASS END=97508172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr2 97508173 . C . PASS END=97508173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 97508174 . A . PASS END=97508210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,915:0,65,255:26,0 chr2 97508211 . A . PASS END=97508211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:20,0 chr2 97508212 . A . PASS END=97508222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 97508223 . T . PASS END=97508248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr2 97509703 . C . PASS END=97509703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 97509704 . A . PASS END=97509706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,242:7,0 chr2 97509707 . T . PASS END=97509714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 97509715 . G . PASS END=97509726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 97509727 . C . PASS END=97509727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 97509728 . A . PASS END=97509729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 97514038 . T . PASS END=97514142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1086:0,86,255:39,0 chr2 97514143 . G . PASS END=97514166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 97514167 . A . PASS END=97514169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr2 97514170 . C . PASS END=97514177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,61,255:20,0 chr2 97514178 . C . PASS END=97514181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 97519138 . C . PASS END=97519140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 97519141 . A . PASS END=97519148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 97519149 . T . PASS END=97519158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,878:0,69,255:24,0 chr2 97519159 . G . PASS END=97519306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1024:0,81,255:40,0 chr2 97519307 . C . PASS END=97519307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:27,0 chr2 97519308 . A . PASS END=97519309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:29,0 chr2 97519310 . A . PASS END=97519326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,73,255:23,0 chr2 97519327 . G . PASS END=97519341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:19,0 chr2 97520075 . C . PASS END=97520084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:19,0 chr2 97520085 . T . PASS END=97520091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 97520092 . C . PASS END=97520092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 97520093 . C . PASS END=97520093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 97520094 . G . PASS END=97520094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 97520095 . A . PASS END=97520129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 97520130 . A . PASS END=97520130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:20,0 chr2 97520131 . A . PASS END=97520134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr2 97520135 . C . PASS END=97520135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 97520136 . T . PASS END=97520152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,892:0,72,255:24,0 chr2 97520153 . T . PASS END=97520178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:18,0 chr2 97523625 . C . PASS END=97523645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,672:0,60,255:22,0 chr2 97523646 . C . PASS END=97523646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 97523647 . C . PASS END=97523653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,768:0,66,255:23,0 chr2 97523654 . T . PASS END=97523654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 97523655 . G . PASS END=97523661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,953:0,75,255:25,0 chr2 97523662 . G . PASS END=97523662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 97523663 . C . PASS END=97523680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr2 97523681 . T . PASS END=97523704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,46,255:19,0 chr2 97523705 . C . PASS END=97523724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,443:0,36,255:12,0 chr2 97526363 . T . PASS END=97526374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr2 97526375 . C . PASS END=97526419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,432:0,42,255:17,0 chr2 97526420 . G . PASS END=97526428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97526429 . T . PASS END=97526434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 97526435 . C . PASS END=97526459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr2 97526460 . A . PASS END=97526460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 97526461 . G . PASS END=97526473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 97526474 . C . PASS END=97526477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 97526478 . C . PASS END=97526479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 97526480 . T . PASS END=97526531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,264:0,24,255:9,0 chr2 97526532 . A . PASS END=97526532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr2 97526533 . G . PASS END=97526536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 97526537 . A . PASS END=97526588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,350:0,33,255:13,0 chr2 97526589 . G . PASS END=97526589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 97526590 . G . PASS END=97526617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr2 97526618 . A . PASS END=97526618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 97526619 . T . PASS END=97526624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 97526625 . G . PASS END=97526628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 97526629 . C . PASS END=97526630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 97526631 . A . PASS END=97526652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr2 97526653 . A . PASS END=97526653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 97526654 . G . PASS END=97526660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr2 97526661 . C . PASS END=97526661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 97526662 . C . PASS END=97526665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 97526666 . A . PASS END=97526666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 97526667 . G . PASS END=97526672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:17,0 chr2 97526673 . C . PASS END=97526673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr2 97526674 . A . PASS END=97526679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 97526680 . T . PASS END=97526680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,454:0,31,255:14,0 chr2 97526681 . C . PASS END=97526741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,499:0,41,255:19,0 chr2 97526742 . G . PASS END=97526742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97526743 . G . PASS END=97526743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:18,0 chr2 97526744 . G . PASS END=97526744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97526745 . T . PASS END=97526745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr2 97526746 . A . PASS END=97526757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 97526758 . T . PASS END=97526758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr2 97526759 . C . PASS END=97526776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 97526777 . T . PASS END=97526777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 97526778 . T . PASS END=97526778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 97526779 . T . PASS END=97526779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 97526780 . C . PASS END=97526852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,838:0,61,255:26,0 chr2 97526853 . G . PASS END=97526853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 97526854 . C . PASS END=97526874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,884:0,69,255:23,0 chr2 97526875 . G . PASS END=97526875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr2 97526876 . C . PASS END=97526880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr2 97526881 . G . PASS END=97526882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,845:0,44,255:23,0 chr2 97526883 . T . PASS END=97526910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr2 97526911 . T . PASS END=97526911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 97526912 . C . PASS END=97526917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 97526918 . C T, 50.00 PASS DP=24;MQ=250.00;MQRankSum=3.747;ReadPosRankSum=0.889;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,17,0:0.708,0.000:24:2,10,0:5,7,0:43:85,0,41,608,250,858:255,0,199:7,0:5.0000e+01,2.2987e-04,4.3671e+01,4.5000e+02,2.8512e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,6,11:5,2,9,8 chr2 97526919 . G . PASS END=97526920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 97526921 . G . PASS END=97526937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:16,0 chr2 97526938 . C . PASS END=97526938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 97526939 . A . PASS END=97526955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:16,0 chr2 97526956 . C . PASS END=97526957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 97526958 . A . PASS END=97526958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 97526959 . G . PASS END=97526984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:17,0 chr2 97526985 . C . PASS END=97526985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 97526986 . A . PASS END=97526999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,675:0,44,255:19,0 chr2 97527000 . G . PASS END=97527008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97527009 . G . PASS END=97527012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 97527013 . G . PASS END=97527041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,839:0,66,255:24,0 chr2 97527042 . C . PASS END=97527042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 97527043 . G . PASS END=97527052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 97527053 . G . PASS END=97527054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 97527055 . G . PASS END=97527082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,908:0,61,255:26,0 chr2 97527083 . G . PASS END=97527182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1147:0,80,255:38,0 chr2 97527183 . G . PASS END=97527184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 97527185 . G . PASS END=97527192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr2 97527316 . C . PASS END=97527386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:34:0,89,1233:0,89,255:40,0 chr2 97527474 . C . PASS END=97527476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 97527477 . G . PASS END=97527481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 97527482 . G . PASS END=97527482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 97527483 . C . PASS END=97527489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr2 97527490 . C . PASS END=97527538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:18,0 chr2 97527539 . G . PASS END=97527545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:23,0 chr2 97527546 . A . PASS END=97527546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 97527547 . C . PASS END=97527565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 97527566 . A . PASS END=97527566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 97527567 . T . PASS END=97527568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 97527569 . C . PASS END=97527569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 97527570 . T . PASS END=97527573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 97527574 . T . PASS END=97527574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 97527575 . G . PASS END=97527576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 97527577 . A . PASS END=97527577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 97527578 . G . PASS END=97527597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 97527598 . C . PASS END=97527599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 97527600 . A . PASS END=97527602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 97527603 . T . PASS END=97527631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr2 97529095 . T . PASS END=97529139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,125,255:40,0 chr2 97529419 . C . PASS END=97529531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:42:0,91,1530:0,91,255:40,0 chr2 97529663 . C . PASS END=97529665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 97529666 . T . PASS END=97529668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 97529669 . C . PASS END=97529701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,900:0,62,255:26,0 chr2 97529702 . G . PASS END=97529702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 97529703 . T . PASS END=97529729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,917:0,75,255:26,0 chr2 97529730 . G . PASS END=97529733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 97529734 . A . PASS END=97529734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr2 97529735 . A . PASS END=97529768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:29:0,80,1139:0,80,255:36,0 chr2 97529769 . C . PASS END=97529769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr2 97529770 . C . PASS END=97529813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,104,1421:0,104,255:40,0 chr2 97529814 . G . PASS END=97529814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:37,0 chr2 97529815 . A . PASS END=97529829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,99,1485:0,103,255:39,0 chr2 97529830 . T . PASS END=97529830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:32,0 chr2 97529831 . C . PASS END=97529837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:36:0,95,1341:0,95,255:35,0 chr2 97529838 . C . PASS END=97529838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:33,0 chr2 97529839 . T . PASS END=97529847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1227:0,88,255:35,0 chr2 97529848 . C . PASS END=97529848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:28,0 chr2 97529849 . T . PASS END=97529862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1210:0,86,255:32,0 chr2 97529863 . C . PASS END=97529863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr2 97529864 . G . PASS END=97529865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 97529866 . C . PASS END=97529866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:28,0 chr2 97529867 . G . PASS END=97529867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:29,0 chr2 97529868 . A . PASS END=97529868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:27,0 chr2 97529869 . T . PASS END=97529872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:29,0 chr2 97529873 . A . PASS END=97529873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:27,0 chr2 97529874 . G . PASS END=97529874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97529875 . T . PASS END=97529875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 97529876 . T . PASS END=97529878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 97529879 . T . PASS END=97529880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1028:0,79,255:26,0 chr2 97529881 . A . PASS END=97529881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,915:0,43,255:23,0 chr2 97529882 . T . PASS END=97529885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,934:0,60,255:24,0 chr2 97529975 . C . PASS END=97529994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:25,0 chr2 97529995 . G . PASS END=97530003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 97530004 . C . PASS END=97530005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 97530006 . G . PASS END=97530108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:28:0,83,1025:0,83,255:34,0 chr2 97530109 . A . PASS END=97530109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97530110 . C . PASS END=97530110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97530111 . A . PASS END=97530119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 97530442 . C . PASS END=97530446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,841:0,61,255:25,0 chr2 97530447 . T . PASS END=97530447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 97530448 . G . PASS END=97530449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 97530450 . T . PASS END=97530450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr2 97530451 . T . PASS END=97530460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,902:0,75,255:25,0 chr2 97530461 . C . PASS END=97530461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 97530462 . A . PASS END=97530466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,795:0,61,255:26,0 chr2 97530467 . A . PASS END=97530469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,897:0,81,255:28,0 chr2 97530470 . T . PASS END=97530470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 97530471 . G . PASS END=97530472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,972:0,84,255:29,0 chr2 97530473 . T . PASS END=97530473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 97530474 . G . PASS END=97530510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1019:0,85,255:34,0 chr2 97530511 . T . PASS END=97530511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1157:0,50,255:31,0 chr2 97530512 . G . PASS END=97530525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1119:0,82,255:32,0 chr2 97530526 . T . PASS END=97530543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,984:0,68,255:26,0 chr2 97530544 . G . PASS END=97530546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,917:0,42,255:25,1 chr2 97530547 . G . PASS END=97530552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 97530553 . G . PASS END=97530553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 97530554 . C . PASS END=97530555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 97530556 . A . PASS END=97530586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr2 97530587 . T . PASS END=97530587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 97530588 . C . PASS END=97530591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 97530592 . A . PASS END=97530594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 97530595 . G . PASS END=97530602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:21,0 chr2 97530603 . G . PASS END=97530603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 97530604 . C . PASS END=97530604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 97530605 . C . PASS END=97530617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,681:0,41,255:18,0 chr2 97530701 . C . PASS END=97530720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1078:0,80,255:32,0 chr2 97530721 . G . PASS END=97530721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 97530722 . A . PASS END=97530767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:38,0 chr2 97530768 . C . PASS END=97530768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr2 97530769 . T . PASS END=97530776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1221:0,81,255:35,0 chr2 97530777 . A . PASS END=97530777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1312:0,78,255:32,0 chr2 97530778 . A . PASS END=97530811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:33,0 chr2 97530812 . C . PASS END=97530812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:27,0 chr2 97530813 . A . PASS END=97530816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr2 97530817 . T . PASS END=97530817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1009:0,52,255:25,0 chr2 97530818 . C . PASS END=97530820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 97530821 . A . PASS END=97530822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1011:0,76,255:27,0 chr2 97530823 . G . PASS END=97530823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97530824 . T . PASS END=97530826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1086:0,77,255:27,0 chr2 97530827 . A . PASS END=97530830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97530831 . G . PASS END=97530834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr2 97530835 . A . PASS END=97530835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 97530836 . G . PASS END=97530839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr2 97530840 . A . PASS END=97530841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97530842 . A . PASS END=97530842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:25,0 chr2 97530843 . A . PASS END=97530843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97530844 . A . PASS END=97530849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97530850 . G . PASS END=97530852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 97530941 . C . PASS END=97530941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 97530942 . G . PASS END=97530943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,856:0,64,255:27,0 chr2 97530944 . T . PASS END=97530946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 97530947 . G . PASS END=97530947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 97530948 . C . PASS END=97530949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 97530950 . A . PASS END=97530950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 97530951 . A . PASS END=97530975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1078:0,80,255:35,0 chr2 97530976 . G . PASS END=97530976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 97530977 . A . PASS END=97531011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:34:0,88,1114:0,88,255:38,0 chr2 97531012 . T . PASS END=97531012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr2 97531013 . C . PASS END=97531050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1283:0,97,255:38,0 chr2 97531051 . T . PASS END=97531051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:29,0 chr2 97531052 . C . PASS END=97531057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:30,0 chr2 97531178 . C . PASS END=97531219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,90,255:35,0 chr2 97531220 . A . PASS END=97531220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1147:0,47,255:32,0 chr2 97531221 . C . PASS END=97531248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1078:0,86,255:35,0 chr2 97531249 . T . PASS END=97531249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr2 97531250 . G . PASS END=97531262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:33,0 chr2 97531263 . G . PASS END=97531263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:30,0 chr2 97531264 . G . PASS END=97531266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 97531267 . A . PASS END=97531267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr2 97531268 . G . PASS END=97531274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 97531403 . G . PASS END=97531409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:35,0 chr2 97531410 . G . PASS END=97531411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 97531412 . G . PASS END=97531412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:33,0 chr2 97531413 . C . PASS END=97531501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1205:0,81,255:40,0 chr2 97531604 . C . PASS END=97531604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 97531605 . T . PASS END=97531609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 97531610 . G . PASS END=97531610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 97531611 . T . PASS END=97531615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 97531616 . C . PASS END=97531616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 97531617 . C . PASS END=97531637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:31,0 chr2 97531638 . T . PASS END=97531638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 97531639 . T . PASS END=97531641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1089:0,93,255:31,0 chr2 97531642 . T . PASS END=97531642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:29,0 chr2 97531643 . C . PASS END=97531659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 97531660 . A . PASS END=97531666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,895:0,67,255:25,0 chr2 97532020 . C . PASS END=97532038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,792:0,62,255:26,0 chr2 97532039 . G . PASS END=97532145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1185:0,80,255:40,0 chr2 97532146 . C . PASS END=97532146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:28,0 chr2 97532147 . C . PASS END=97532162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:29,0 chr2 97532163 . C . PASS END=97532168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr2 97533515 . C . PASS END=97533521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 97533522 . A . PASS END=97533522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 97533523 . G . PASS END=97533529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:23,0 chr2 97533530 . T . PASS END=97533530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:22,0 chr2 97533531 . C . PASS END=97533544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:25,0 chr2 97533545 . G . PASS END=97533545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 97533546 . G . PASS END=97533551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:26,0 chr2 97533552 . C . PASS END=97533553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 97533554 . A . PASS END=97533558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr2 97533559 . T . PASS END=97533559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:25,0 chr2 97533560 . C . PASS END=97533576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,900:0,61,255:26,0 chr2 97533577 . C . PASS END=97533577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:22,0 chr2 97533578 . C . PASS END=97533578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 97533579 . C . PASS END=97533579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 97533580 . C . PASS END=97533613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,856:0,65,255:26,0 chr2 97533614 . G . PASS END=97533621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1041:0,84,255:28,0 chr2 97533622 . A . PASS END=97533622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 97533623 . T . PASS END=97533623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97533624 . G . PASS END=97533624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 97533625 . G . PASS END=97533625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97533626 . C . PASS END=97533637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,77,255:27,0 chr2 97533638 . C . PASS END=97533638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97533639 . T . PASS END=97533639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 97533640 . C . PASS END=97533648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 97533649 . A . PASS END=97533649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:25,0 chr2 97533650 . G . PASS END=97533663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:29,0 chr2 97533664 . C . PASS END=97533664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 97533665 . T . PASS END=97533666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 97533667 . A . PASS END=97533667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 97533668 . G . PASS END=97533668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 97533669 . G . PASS END=97533672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 97533673 . A . PASS END=97533677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97533678 . A . PASS END=97533679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,986:0,67,255:26,0 chr2 97533680 . G . PASS END=97533683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 97533684 . A . PASS END=97533684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 97533685 . G . PASS END=97533686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 97533687 . A . PASS END=97533690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1000:0,68,255:28,0 chr2 97533691 . A . PASS END=97533695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:29,0 chr2 97533696 . C . PASS END=97533696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 97533697 . A . PASS END=97533698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97533699 . A . PASS END=97533699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr2 97533700 . G . PASS END=97533701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97533702 . A . PASS END=97533703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1008:0,68,255:26,0 chr2 97533704 . G . PASS END=97533706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97533707 . A . PASS END=97533708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,804:0,67,255:26,0 chr2 97533709 . C . PASS END=97533711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97533712 . G . PASS END=97533713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:26,0 chr2 97533714 . G . PASS END=97533716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97533717 . G . PASS END=97533717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 97533718 . C . PASS END=97533719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97533720 . C . PASS END=97533730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:25,0 chr2 97533731 . A . PASS END=97533731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,726:0,36,255:22,0 chr2 97533732 . G . PASS END=97533748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr2 97533749 . T . PASS END=97533749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr2 97542013 . T . PASS END=97542020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 97542021 . C . PASS END=97542024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 97542025 . C . PASS END=97542025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr2 97542026 . C . PASS END=97542028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 97542029 . G . PASS END=97542042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 97542043 . G . PASS END=97542045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97543627 . C . PASS END=97543640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr2 97543641 . G . PASS END=97543641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 97543642 . G . PASS END=97543694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,582:0,41,255:19,0 chr2 97543695 . T . PASS END=97543696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97543697 . G . PASS END=97543699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 97543700 . C . PASS END=97543700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:14,0 chr2 97543701 . G . PASS END=97543703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 97543704 . G . PASS END=97543704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr2 97543705 . C . PASS END=97543720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:19,0 chr2 97543721 . T . PASS END=97543746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 97543747 . G . PASS END=97543779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 97544153 . C . PASS END=97544154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:34,0 chr2 97544155 . A . PASS END=97544155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr2 97544156 . C . PASS END=97544230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:33:0,82,1208:0,82,255:39,0 chr2 97559663 . C . PASS END=97559721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,101,1425:0,101,255:40,0 chr2 97559722 . C . PASS END=97559758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,102,1456:0,102,255:40,0 chr2 97559759 . G A, 184.06 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,17,0:0,29,0:134:222,137,0,1676,137,1676:255,141,0:0,0:1.8406e+02,1.3406e+02,0.0000e+00,4.5000e+02,1.6883e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,24:0,0,29,17 chr2 97559760 . A . PASS END=97559771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:38:0,84,1467:0,84,255:37,0 chr2 97559772 . C . PASS END=97559772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1294:0,56,255:34,0 chr2 97559773 . G . PASS END=97559788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:38,0 chr2 97559921 . C . PASS END=97559965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,194,255:40,0 chr2 97560798 . C . PASS END=97560824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,156,255:40,0 chr2 97563612 . C . PASS END=97563638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:33:0,92,1197:0,92,255:36,0 chr2 97563639 . G . PASS END=97563639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 97563640 . C . PASS END=97563648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,108,1620:0,114,255:40,0 chr2 97563649 . G . PASS END=97563649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1457:0,76,255:38,0 chr2 97563650 . C . PASS END=97563707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,107,1518:0,107,255:40,0 chr2 97563708 . T . PASS END=97563740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1305:0,92,255:40,0 chr2 97568357 . C . PASS END=97568359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:19,0 chr2 97568360 . G . PASS END=97568377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,740:0,60,255:23,0 chr2 97568378 . A . PASS END=97568378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,693:0,52,255:22,0 chr2 97568379 . G . PASS END=97568392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:24,0 chr2 97568393 . C . PASS END=97568394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,809:0,44,255:23,0 chr2 97568395 . G . PASS END=97568414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,832:0,61,255:25,0 chr2 97568415 . A . PASS END=97568415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:24,0 chr2 97568416 . C . PASS END=97568416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,892:0,34,255:24,0 chr2 97568417 . C . PASS END=97568421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:25,0 chr2 97568422 . G . PASS END=97568422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr2 97568423 . G . PASS END=97568425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 97568426 . G . PASS END=97568426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 97568427 . A . PASS END=97568430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 97568431 . G . PASS END=97568431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 97568432 . G . PASS END=97568436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 97568437 . G . PASS END=97568437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 97568438 . A . PASS END=97568439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 97568440 . G . PASS END=97568440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 97568441 . C . PASS END=97568443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 97568444 . C . PASS END=97568444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 97586902 . C . PASS END=97586999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,151,255:40,0 chr2 97587215 . C . PASS END=97587225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,884:0,69,255:23,0 chr2 97587226 . A . PASS END=97587226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:22,0 chr2 97587227 . C . PASS END=97587247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr2 97587248 . C . PASS END=97587248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 97587249 . A . PASS END=97587249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 97587250 . A . PASS END=97587250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 97587251 . G . PASS END=97587251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 97587252 . A . PASS END=97587252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 97587253 . G . PASS END=97587270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,832:0,61,255:26,0 chr2 97587271 . C . PASS END=97587272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 97587273 . A . PASS END=97587273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:26,0 chr2 97587274 . C . PASS END=97587280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 97587281 . C . PASS END=97587283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 97587284 . C . PASS END=97587342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1170:0,83,255:34,0 chr2 97587343 . T . PASS END=97587343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:31,0 chr2 97587344 . C . PASS END=97587354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1178:0,96,255:32,0 chr2 97587355 . A . PASS END=97587356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 97587357 . G . PASS END=97587358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 97587359 . C . PASS END=97587374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,68,255:24,0 chr2 97587375 . G . PASS END=97587388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,56,255:19,0 chr2 97587389 . A . PASS END=97587389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr2 97587390 . A . PASS END=97587391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,652:0,43,255:19,0 chr2 97589227 . C . PASS END=97589243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,917:0,65,255:26,0 chr2 97589244 . G . PASS END=97589249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 97589250 . T . PASS END=97589250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 97589251 . G . PASS END=97589259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:31,0 chr2 97589260 . A . PASS END=97589261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 97589262 . T . PASS END=97589266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 97589267 . T . PASS END=97589268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 97589269 . G . PASS END=97589303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:32,0 chr2 97589304 . C . PASS END=97589320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,68,255:25,0 chr2 97594943 . C . PASS END=97594948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1135:0,90,255:31,0 chr2 97594949 . C . PASS END=97594949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:30,0 chr2 97594950 . C . PASS END=97594966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1105:0,86,255:35,0 chr2 97594967 . A . PASS END=97594967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr2 97594968 . G . PASS END=97594970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:38,0 chr2 97594971 . G . PASS END=97594971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1233:0,67,255:35,0 chr2 97594972 . G . PASS END=97595057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,116,1584:0,116,255:40,0 chr2 97606003 . T . PASS END=97606009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 97606010 . C . PASS END=97606016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 97606017 . C . PASS END=97606039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,470:0,42,255:19,0 chr2 97606040 . C . PASS END=97606111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:23,0 chr2 97606112 . T . PASS END=97606112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 97606113 . T . PASS END=97606122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 97606123 . T . PASS END=97606162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 97606163 . T . PASS END=97606178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 97606179 . C . PASS END=97606184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 97607071 . A . PASS END=97607071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 97613555 . C . PASS END=97613604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,127,255:40,0 chr2 97613605 . G . PASS END=97613639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,105,1575:0,106,255:40,0 chr2 97617116 . C . PASS END=97617195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1334:0,98,255:40,0 chr2 97617196 . A . PASS END=97617196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:31,0 chr2 97617197 . G . PASS END=97617198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1194:0,86,255:32,0 chr2 97617199 . A . PASS END=97617200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr2 97617201 . A . PASS END=97617215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr2 97617216 . G . PASS END=97617221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr2 97626025 . C . PASS END=97626025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 97626026 . T . PASS END=97626035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr2 97626036 . C . PASS END=97626041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr2 97626042 . C . PASS END=97626042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 97626043 . A . PASS END=97626043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 97626044 . G . PASS END=97626044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 97626045 . G . PASS END=97626061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:25,0 chr2 97626062 . G . PASS END=97626062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:23,0 chr2 97626063 . G . PASS END=97626098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,878:0,61,255:26,0 chr2 97626099 . C . PASS END=97626099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 97626100 . C . PASS END=97626108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,894:0,64,255:26,0 chr2 97626109 . A . PASS END=97626109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,876:0,26,255:22,0 chr2 97626110 . A . PASS END=97626142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:24,0 chr2 97626143 . T . PASS END=97626150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:19,0 chr2 97626151 . G . PASS END=97626168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:10:0,30,365:0,30,255:12,0 chr2 97626169 . A . PASS END=97626169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 97626170 . C . PASS END=97626171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 97626172 . A . PASS END=97626173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 97626174 . C . PASS END=97626175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 97626176 . T . PASS END=97626177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 97633257 . C . PASS END=97633265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,894:0,72,255:26,0 chr2 97633266 . G . PASS END=97633271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 97633272 . A . PASS END=97633272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 97633273 . G . PASS END=97633326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1095:0,80,255:31,0 chr2 97633327 . G . PASS END=97633327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr2 97633328 . A . PASS END=97633333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 97633334 . C . PASS END=97633360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 97633361 . T . PASS END=97633364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:17,0 chr2 97636453 . C . PASS END=97636514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,114,1745:0,114,255:40,0 chr2 97637638 . C . PASS END=97637663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr2 97637664 . G . PASS END=97637678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr2 97637679 . A . PASS END=97637679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 97637680 . G . PASS END=97637706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,778:0,63,255:22,0 chr2 97637707 . C . PASS END=97637738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,631:0,41,255:19,0 chr2 97637739 . C . PASS END=97637739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 97637740 . C . PASS END=97637755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,706:0,54,255:19,0 chr2 97637756 . T . PASS END=97637756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,652:0,21,255:16,0 chr2 97637757 . C . PASS END=97637764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:17,0 chr2 97637765 . A . PASS END=97637765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 97637766 . G . PASS END=97637775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 97637776 . G . PASS END=97637776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 97637777 . C . PASS END=97637777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 97637778 . C . PASS END=97637778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 97637779 . C . PASS END=97637783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr2 97637784 . G . PASS END=97637785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 97637786 . C . PASS END=97637800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,673:0,41,255:18,0 chr2 97637801 . C . PASS END=97637801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:15,0 chr2 97637802 . A . PASS END=97637803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 97637804 . C . PASS END=97637805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,41,255:12,0 chr2 97637806 . C . PASS END=97637806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:11,0 chr2 97637807 . T . PASS END=97637828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,495:0,32,255:13,0 chr2 97637829 . C . PASS END=97637829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 97637830 . C . PASS END=97637845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 97637846 . T . PASS END=97637846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,333:0,2,255:10,0 chr2 97637847 . T . PASS END=97637861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:12,0 chr2 97637862 . G . PASS END=97637862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 97637863 . C . PASS END=97637865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr2 97637866 . G . PASS END=97637866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 97637867 . G . PASS END=97637873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 97637874 . A . PASS END=97637874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr2 97637875 . G . PASS END=97637878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 97637879 . G . PASS END=97637880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 97637881 . G . PASS END=97637882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 97637883 . G . PASS END=97637883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 97637884 . A . PASS END=97637884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 97637885 . A . PASS END=97637885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 97637886 . A . PASS END=97637886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 97637887 . C . PASS END=97637887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 97637888 . G . PASS END=97637889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 97637890 . T . PASS END=97637890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 97637891 . T . PASS END=97637892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 97637893 . C . PASS END=97637893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 97637894 . C . PASS END=97637899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 97637900 . G . PASS END=97637900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr2 97637901 . C . PASS END=97637901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97637902 . C . PASS END=97637902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 97637903 . T . PASS END=97637903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 97637904 . G . PASS END=97637905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,494:0,28,255:13,0 chr2 97637906 . A . PASS END=97637916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:14,0 chr2 97637917 . C . PASS END=97637917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 97637918 . T . PASS END=97637918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 97637919 . T . PASS END=97637922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 97637923 . C . PASS END=97637927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 97637928 . T . PASS END=97637938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97637939 . G . PASS END=97637939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 97637940 . C . PASS END=97637947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 97637948 . G . PASS END=97638020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,344:0,33,255:13,0 chr2 97638021 . T . PASS END=97638021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 97638022 . G . PASS END=97638038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,366:0,30,255:11,0 chr2 97638039 . C . PASS END=97638059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,271:0,21,255:9,0 chr2 97638275 . C . PASS END=97638284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,967:0,65,255:26,0 chr2 97638285 . A . PASS END=97638285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr2 97638286 . G . PASS END=97638290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 97638291 . G . PASS END=97638291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97638292 . G . PASS END=97638302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1031:0,71,255:26,0 chr2 97638303 . C . PASS END=97638303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 97638304 . T . PASS END=97638304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 97638305 . C . PASS END=97638318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1096:0,87,255:30,0 chr2 97638319 . A . PASS END=97638319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 97638320 . T . PASS END=97638323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 97638324 . C . PASS END=97638324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 97638325 . A . PASS END=97638326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 97638327 . G . PASS END=97638327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 97638328 . C . PASS END=97638338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 97638339 . C . PASS END=97638343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 97651978 . C . PASS END=97652050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,108,1558:0,111,255:40,0 chr2 97748143 . C . PASS END=97748167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,184,255:40,0 chr2 97748217 . T . PASS END=97748265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,182,255:40,0 chr2 97748410 . C . PASS END=97748489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:47:0,111,1645:0,111,255:40,0 chr2 97749492 . T . PASS END=97749540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,197,255:40,0 chr2 97749541 . A . PASS END=97749554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,183,255:40,0 chr2 97749685 . C . PASS END=97749772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,111,1372:0,111,255:40,2 chr2 97749906 . T . PASS END=97750014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:69:0,120,1800:0,193,255:40,0 chr2 97751436 . C . PASS END=97751440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 97751441 . A . PASS END=97751466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr2 97751467 . G . PASS END=97751536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1062:0,84,255:35,0 chr2 97751537 . T . PASS END=97751537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1206:0,72,255:32,0 chr2 97751538 . C . PASS END=97751598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:35:0,98,1307:0,98,255:40,0 chr2 97751876 . C . PASS END=97751935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,118,1800:0,118,255:40,0 chr2 97755789 . T . PASS END=97755789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:22,0 chr2 97755790 . C . PASS END=97755797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr2 97755798 . C . PASS END=97755798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 97755799 . C . PASS END=97755800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 97755801 . T . PASS END=97755801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:22,0 chr2 97755802 . G . PASS END=97755802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 97755803 . T . PASS END=97755803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 97755804 . G . PASS END=97755804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 97755805 . A . PASS END=97755805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 97755806 . T . PASS END=97755829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:23:0,61,839:0,61,255:25,0 chr2 97755830 . G . PASS END=97755836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr2 97755837 . G . PASS END=97755837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 97755838 . G . PASS END=97756062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:80:28:0,80,1055:0,80,255:40,0 chr2 97757199 . C . PASS END=97757437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:30:0,84,1260:0,90,255:40,1 chr2 97757438 . C . PASS END=97757440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 97757441 . C . PASS END=97757443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 97779477 . A . PASS END=97779666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,86,255:40,1 chr2 97779667 . A . PASS END=97779667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:26,0 chr2 97779668 . G . PASS END=97779673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 97783801 . G . PASS END=97783915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,120,1800:0,132,255:40,0 chr2 97784081 . G . PASS END=97784251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:40:0,84,1260:0,104,255:40,0 chr2 97784252 . A . PASS END=97784257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:48:39:0,48,720:0,117,255:19,0 chr2 97784258 . T . PASS END=97784260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:45:35:0,45,675:0,89,255:15,0 chr2 97788624 . T . PASS END=97788730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:78:0,120,1800:0,229,255:40,0 chr2 97790197 . A . PASS END=97790198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1178:0,86,255:32,0 chr2 97790199 . C . PASS END=97790199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:31,0 chr2 97790200 . A . PASS END=97790334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:33:0,83,1186:0,83,255:40,0 chr2 97792804 . C . PASS END=97792871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,139,255:40,0 chr2 97808377 . T . PASS END=97808405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,119,1605:0,119,255:40,0 chr2 97808500 . G . PASS END=97808526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1086:0,84,255:29,0 chr2 97808527 . T . PASS END=97808527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 97808528 . C . PASS END=97808539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1070:0,84,255:28,0 chr2 97808540 . C . PASS END=97808572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,786:0,66,255:26,0 chr2 97810255 . T . PASS END=97810255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 97810256 . G . PASS END=97810279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,940:0,84,255:30,0 chr2 97810280 . G . PASS END=97810280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 97810281 . A . PASS END=97810282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr2 97810283 . G . PASS END=97810283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 97810377 . G . PASS END=97810390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,831:0,66,255:23,0 chr2 97810391 . G . PASS END=97810399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr2 97810400 . T . PASS END=97810400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 97810401 . G . PASS END=97810407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 97810408 . A . PASS END=97810420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 97810421 . A . PASS END=97810423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:28,0 chr2 97810424 . A . PASS END=97810449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,878:0,61,255:25,0 chr2 97812223 . T . PASS END=97812253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:64:0,120,1800:0,176,255:40,0 chr2 97815032 . G . PASS END=97815048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,894:0,72,255:26,0 chr2 97815049 . A . PASS END=97815057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:30,0 chr2 97815058 . C . PASS END=97815061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 97815062 . G . PASS END=97815074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1055:0,84,255:28,0 chr2 97815075 . A . PASS END=97815075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,907:0,67,255:27,0 chr2 97815076 . A . PASS END=97815092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr2 97815093 . T . PASS END=97815098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr2 97817616 . A . PASS END=97817676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,1:116:99:102:0,120,1800:0,246,255:40,0 chr2 97818241 . T . PASS END=97818271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:95:0,120,1800:0,239,255:40,0 chr2 97820412 . G . PASS END=97820414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1282:0,105,255:35,0 chr2 97820415 . T . PASS END=97820415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1101:0,58,255:33,0 chr2 97820416 . C . PASS END=97820478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:37:0,84,1207:0,96,255:40,0 chr2 97823844 . A . PASS END=97823904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,152,255:40,0 chr2 97824325 . T . PASS END=97824392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:83:0,120,1800:0,234,255:40,0 chr2 97827836 . G . PASS END=97827869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:71:0,120,1800:0,182,255:40,0 chr2 97827870 . C . PASS END=97827875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:81:0,120,1800:0,210,255:40,0 chr2 97828976 . C . PASS END=97828977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,160,255:40,0 chr2 97828981 . G . PASS END=97829075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,105,1800:0,105,255:40,4 chr2 97829076 . T . PASS END=97829085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,170,255:40,0 chr2 97830020 . T . PASS END=97830048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1142:0,85,255:34,0 chr2 97830134 . C . PASS END=97830150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,95,255:34,0 chr2 97830151 . A . PASS END=97830151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:30,0 chr2 97830152 . G . PASS END=97830170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1155:0,80,255:31,0 chr2 97830171 . T . PASS END=97830171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr2 97830172 . C . PASS END=97830176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 97830177 . G . PASS END=97830199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 97830200 . A . PASS END=97830206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:20:0,54,810:0,56,255:19,0 chr2 97833314 . A . PASS END=97833341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,108,1566:0,108,255:40,0 chr2 97833342 . G . PASS END=97833342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:51:43:0,51,1391:0,51,255:38,0 chr2 97833432 . C . PASS END=97833479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:37,0 chr2 97833480 . A . PASS END=97833491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:64:27:0,64,897:0,64,255:25,0 chr2 97833492 . C . PASS END=97833492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr2 97833493 . C . PASS END=97833493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 97833494 . T . PASS END=97833494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 97833495 . C . PASS END=97833495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr2 97833496 . C . PASS END=97833496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 97833497 . A . PASS END=97833497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 97833498 . G . PASS END=97833501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,868:0,69,255:23,0 chr2 97833502 . A . PASS END=97833503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr2 97833504 . G . PASS END=97833504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 97845475 . T . PASS END=97845475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 97845476 . G . PASS END=97845490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,904:0,87,255:31,0 chr2 97845491 . A . PASS END=97845491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 97845492 . C . PASS END=97845503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1082:0,80,255:32,0 chr2 97845598 . G . PASS END=97845657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:39:0,90,1350:0,104,255:40,0 chr2 97845658 . A . PASS END=97845670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:25:0,66,990:0,75,255:25,0 chr2 97847335 . T . PASS END=97847363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,115,1477:0,115,255:40,0 chr2 97847458 . G . PASS END=97847512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:88:41:0,88,1389:0,88,255:40,0 chr2 97847513 . G . PASS END=97847513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1463:0,77,255:30,0 chr2 97847514 . A . PASS END=97847523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:37:0,82,1260:0,82,255:32,0 chr2 97847524 . G . PASS END=97847524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1271:0,61,255:29,0 chr2 97847525 . G . PASS END=97847526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,89,255:29,0 chr2 97847527 . A . PASS END=97847528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1186:0,61,255:27,0 chr2 97847529 . A . PASS END=97847529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97847530 . G . PASS END=97847530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr2 97849196 . T . PASS END=97849218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:82:0,120,1800:0,213,255:40,0 chr2 97849219 . T C, 46.92 PASS DP=86;MQ=120.01;MQRankSum=-4.341;ReadPosRankSum=6.017;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,42,0:0.488,0.000:86:26,24,0:18,18,0:46:82,0,49,1494,1506,3000:255,0,255:40,0:4.6922e+01,1.1519e-04,5.2050e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:30,14,28,14:24,20,24,18 chr2 97849220 . G . PASS END=97849224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:87:0,120,1800:0,255,255:40,0 chr2 97849319 . G . PASS END=97849391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:83:0,120,1800:0,233,255:40,0 chr2 97851053 . T . PASS END=97851068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1287:0,84,255:40,0 chr2 97851069 . A G, 39.07 PASS DP=45;MQ=44.56;MQRankSum=0.240;ReadPosRankSum=3.803;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,20,0:0.444,0.000:45:13,12,0:12,8,0:38:74,0,44,715,883,1599:255,0,255:25,0:3.9074e+01,6.2933e-04,4.6751e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,7,10,10:18,7,12,8 chr2 97851070 . C . PASS END=97851081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:46:0,120,1800:0,122,255:40,0 chr2 97851175 . G . PASS END=97851247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,114,1710:0,121,255:40,0 chr2 97852935 . T . PASS END=97852963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,118,1509:0,118,255:40,0 chr2 97853066 . G . PASS END=97853138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,113,1800:0,113,255:40,0 chr2 97854824 . T . PASS END=97854825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 97854826 . T . PASS END=97854826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:20,0 chr2 97854827 . C . PASS END=97854837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,824:0,72,255:24,0 chr2 97854838 . C . PASS END=97854840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 97854841 . C . PASS END=97854842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 97854843 . A . PASS END=97854843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 97854844 . G . PASS END=97854850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,914:0,72,255:24,0 chr2 97854851 . A . PASS END=97854851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr2 97854852 . G . PASS END=97854852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 97854955 . G . PASS END=97854967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 97854968 . A . PASS END=97854968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 97854969 . G . PASS END=97854974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr2 97854975 . T . PASS END=97854975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 97854976 . T . PASS END=97854976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 97854977 . C . PASS END=97854977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 97854978 . T . PASS END=97854980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:32,0 chr2 97854981 . T . PASS END=97854982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,951:0,79,255:31,0 chr2 97854983 . C . PASS END=97855005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:32,0 chr2 97855006 . G . PASS END=97855006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:27,0 chr2 97855007 . A . PASS END=97855008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 97855009 . G . PASS END=97855010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,1064:0,76,255:26,0 chr2 97855011 . A . PASS END=97855011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 97855012 . G . PASS END=97855012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,991:0,76,255:26,0 chr2 97855013 . A . PASS END=97855022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 97855023 . G . PASS END=97855023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:25,0 chr2 97855024 . A . PASS END=97855024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 97855025 . C . PASS END=97855025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:25,0 chr2 97855026 . A . PASS END=97855026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:26,0 chr2 97855027 . G . PASS END=97855027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 97856715 . T . PASS END=97856722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1217:0,96,255:35,0 chr2 97856723 . C . PASS END=97856723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 97856724 . A . PASS END=97856743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1349:0,105,255:40,0 chr2 97856846 . G . PASS END=97856918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:92:35:0,92,1266:0,92,255:37,0 chr2 97858595 . T . PASS END=97858601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 97858602 . T . PASS END=97858602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 97858603 . C . PASS END=97858623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,930:0,72,255:25,0 chr2 97858718 . G . PASS END=97858719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 97858720 . T . PASS END=97858720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 97858721 . A . PASS END=97858732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 97858733 . G . PASS END=97858733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 97858734 . A . PASS END=97858734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 97858735 . A . PASS END=97858735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr2 97858736 . G . PASS END=97858760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1144:0,86,255:34,0 chr2 97858761 . A . PASS END=97858761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1062:0,69,255:29,0 chr2 97858762 . A . PASS END=97858790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1049:0,82,255:34,0 chr2 97860463 . T . PASS END=97860491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,116,1709:0,116,255:40,0 chr2 97860581 . G . PASS END=97860596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,102,1530:0,114,255:37,0 chr2 97860597 . A . PASS END=97860597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1234:0,59,255:35,0 chr2 97860598 . A . PASS END=97860647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:36:0,80,1160:0,80,255:38,0 chr2 97860648 . A . PASS END=97860648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:33,0 chr2 97860649 . G . PASS END=97860654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1340:0,92,255:34,0 chr2 97862330 . T . PASS END=97862358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:67:0,120,1800:0,173,255:40,0 chr2 97862453 . G . PASS END=97862525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:38:0,82,1388:0,82,255:40,0 chr2 97864196 . T . PASS END=97864228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:95:0,120,1800:0,255,255:40,0 chr2 97864323 . G . PASS END=97864332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,197,255:40,0 chr2 97864333 . C A, 45.65 PASS DP=71;MQ=75.30;MQRankSum=-3.654;ReadPosRankSum=2.256;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:27,44,0:0.620,0.000:71:9,18,0:18,26,0:41:80,0,40,180,180,180:255,0,255:27,0:4.5650e+01,3.2152e-04,4.3295e+01,1.8042e+02,2.1519e+02,1.8343e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,17,20,24:18,9,30,14:97864333 chr2 97864334 . C T, 45.65 PASS DP=71;MQ=75.30;MQRankSum=-3.654;ReadPosRankSum=2.197;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:27,44,0:0.620,0.000:71:9,18,0:18,26,0:41:80,0,40,180,180,180:255,0,255:27,0:4.5650e+01,3.2152e-04,4.3295e+01,1.8042e+02,2.1519e+02,1.8343e+02:0.00,34.77,37.78,34.77,69.54,37.78:10,17,20,24:18,9,30,14:97864333 chr2 97864335 . G . PASS END=97864373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,157,255:40,1 chr2 97864374 . G T, 45.05 PASS DP=63;MQ=64.64;MQRankSum=-3.479;ReadPosRankSum=0.285;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,36,0:0.571,0.000:63:9,15,0:18,21,0:43:80,0,44,1271,891,2163:255,0,255:25,0:4.5050e+01,2.2107e-04,4.7067e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,15,21:13,14,20,16 chr2 97864375 . A . PASS END=97864395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:59:0,120,1800:0,139,255:40,0 chr2 97866071 . T . PASS END=97866099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,194,255:40,0 chr2 97866190 . G . PASS END=97866261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,191,255:40,0 chr2 97866262 . G . PASS END=97866262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr2 97867939 . T . PASS END=97867967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,155,255:40,0 chr2 97868058 . G . PASS END=97868117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1210:0,86,255:35,0 chr2 97868118 . A . PASS END=97868118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 97868119 . A . PASS END=97868130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 97869805 . T . PASS END=97869833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,116,1800:0,116,255:40,0 chr2 97869928 . G . PASS END=97870000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,105,1648:0,105,255:40,1 chr2 97871677 . T . PASS END=97871705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,636:0,41,255:19,0 chr2 97871800 . G . PASS END=97871802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 97871803 . A . PASS END=97871807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 97871808 . T . PASS END=97871808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 97871809 . G . PASS END=97871811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 97871812 . G . PASS END=97871831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:16,0 chr2 97871832 . T . PASS END=97871832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 97871833 . A . PASS END=97871849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,544:0,48,255:17,0 chr2 97871850 . G . PASS END=97871850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 97871851 . G . PASS END=97871872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr2 97873548 . T . PASS END=97873556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr2 97873557 . A . PASS END=97873557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 97873558 . G . PASS END=97873558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 97873559 . A . PASS END=97873559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,824:0,73,255:28,0 chr2 97873560 . A . PASS END=97873564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 97873565 . T . PASS END=97873565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 97873566 . C . PASS END=97873570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 97873571 . T . PASS END=97873571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:27,0 chr2 97873572 . T . PASS END=97873576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 97873671 . G . PASS END=97873673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 97873674 . A . PASS END=97873674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1241:0,34,255:32,0 chr2 97873675 . C . PASS END=97873680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:34:0,95,1175:0,95,255:34,0 chr2 97873681 . C . PASS END=97873681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1086:0,25,255:32,0 chr2 97873682 . C . PASS END=97873682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1119:0,33,255:32,0 chr2 97873683 . G . PASS END=97873721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1147:0,85,255:40,0 chr2 97873722 . T . PASS END=97873722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1235:0,37,255:35,0 chr2 97873723 . A . PASS END=97873735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:37,0 chr2 97873736 . T . PASS END=97873736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:34,0 chr2 97873737 . A . PASS END=97873737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 97873738 . A . LowGQ END=97873738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:0:38:0,0,1111:19,0,255:31,0 chr2 97873739 . G . PASS END=97873740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 97873741 . G . LowGQ END=97873741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:0:38:0,0,1121:2,0,255:32,0 chr2 97873742 . A . PASS END=97873743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 97875418 . T . PASS END=97875446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,117,1743:0,117,255:40,0 chr2 97875537 . G . PASS END=97875609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:42:0,91,1463:0,91,255:40,0 chr2 97877283 . T . PASS END=97877291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,106,1346:0,106,255:40,0 chr2 97877292 . C A, 49.70 PASS DP=41;MQ=167.50;MQRankSum=-3.236;ReadPosRankSum=4.385;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,28,0:0.683,0.000:41:4,13,0:9,15,0:42:84,0,40,184,184,184:255,0,255:13,0:4.9700e+01,2.7699e-04,4.2751e+01,1.8447e+02,2.1924e+02,1.8748e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,4,13,15:4,9,12,16 chr2 97877293 . G . PASS END=97877311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:41:0,90,1433:0,90,255:40,0 chr2 97877406 . G . PASS END=97877439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,114,1710:0,125,255:40,0 chr2 97877440 . T C, 35.59 PASS DP=53;MQ=181.31;MQRankSum=-1.657;ReadPosRankSum=2.238;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,16,0:0.302,0.000:53:19,8,0:18,8,0:36:70,0,50,572,1315,1887:255,0,255:36,0:3.5586e+01,1.2217e-03,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,23,6,10:22,15,10,6 chr2 97877441 . G . PASS END=97877477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:50:0,120,1800:0,123,255:40,1 chr2 97877478 . G A, 42.84 PASS DP=50;MQ=183.15;MQRankSum=-2.132;ReadPosRankSum=1.486;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,18,0:0.360,0.000:50:15,9,0:17,9,0:42:78,0,50,615,1144,1759:255,0,255:31,0:4.2839e+01,2.4774e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,17,10,8:14,18,11,7 chr2 97879156 . T . PASS END=97879161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 97879162 . G C, 37.55 PASS DP=4;MQ=25.62;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,4,0:1.000,0.000:4:0,2,0:0,2,0:10:75,12,0,155,12,155:155,12,0:0,0:3.7550e+01,9.5505e+00,5.1156e-01,1.5263e+02,4.4320e+01,1.5563e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,2:0,0,4,0 chr2 97879163 . T . PASS END=97879184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr2 97879279 . G . PASS END=97879293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr2 97879294 . A . PASS END=97879294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr2 97879295 . A . PASS END=97879300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,405:0,39,255:13,0 chr2 97879301 . C . PASS END=97879301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 97879302 . T . PASS END=97879304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 97879305 . T . PASS END=97879311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,476:0,42,255:17,0 chr2 97879312 . A . PASS END=97879312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:16,0 chr2 97879313 . T . PASS END=97879315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr2 97879316 . C . PASS END=97879316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr2 97879317 . C . PASS END=97879322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,605:0,51,255:17,0 chr2 97879323 . A . PASS END=97879323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 97879324 . A . PASS END=97879326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr2 97879327 . A . PASS END=97879327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 97879328 . A . PASS END=97879333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,517:0,51,255:18,0 chr2 97879334 . G . PASS END=97879334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 97879335 . A . PASS END=97879351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 97881038 . T . PASS END=97881066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,144,255:40,0 chr2 97881162 . G . PASS END=97881312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:140,0:140:99:82:0,120,1800:0,239,255:40,0 chr2 97881367 . T . PASS END=97881377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:177,0:177:99:175:0,120,1800:0,255,255:40,0 chr2 97881519 . T . PASS END=97881548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,209,255:40,0 chr2 97881549 . G . PASS END=97881562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,4:73:99:71:0,120,1800:0,153,255:40,0 chr2 97882370 . C . PASS END=97882377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1116:0,87,255:30,0 chr2 97882378 . T . PASS END=97882378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:28,0 chr2 97882379 . A . PASS END=97882393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:35,0 chr2 97882469 . T . PASS END=97882475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,130,255:40,0 chr2 97882540 . G . PASS END=97882548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,120,1800:0,122,255:40,0 chr2 97882907 . T . PASS END=97882942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,201,255:40,0 chr2 97883037 . G . PASS END=97883047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:92:0,120,1800:0,243,255:40,0 chr2 97883048 . A . PASS END=97883086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,209,255:40,0 chr2 97883087 . A G, 26.06 PASS DP=98;MQ=52.29;MQRankSum=-3.168;ReadPosRankSum=3.928;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:74,24,0:0.245,0.000:98:42,12,0:32,12,0:26:61,0,43,161,161,161:255,0,255:40,0:2.6057e+01,1.0883e-02,4.6261e+01,1.6083e+02,1.9560e+02,1.6384e+02:0.00,34.77,37.78,34.77,69.54,37.78:22,52,6,18:34,40,14,10:97883087 chr2 97883088 . G . PASS END=97883093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:93:0,120,1800:0,255,255:40,0 chr2 97883094 . T G, 26.06 PASS DP=94;MQ=54.79;MQRankSum=-3.286;ReadPosRankSum=2.834;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:71,22,0:0.237,0.000:93:42,12,0:29,10,0:26:61,0,43,161,161,161:255,0,255:40,0:2.6057e+01,1.0883e-02,4.6261e+01,1.6083e+02,1.9560e+02,1.6384e+02:0.00,34.77,37.78,34.77,69.54,37.78:24,47,6,16:33,38,12,10:97883087 chr2 97883095 . G . PASS END=97883109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:91:0,120,1800:0,255,255:40,0 chr2 97884787 . A . PASS END=97884800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:101:0,120,1800:0,255,255:40,0 chr2 97884801 . C . PASS END=97884815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:110:0,120,1800:0,255,255:40,0 chr2 97884911 . G . PASS END=97884983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:146,0:146:99:107:0,120,1800:0,255,255:40,0 chr2 97890543 . C . PASS END=97890570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,108,1755:0,108,255:40,0 chr2 97890571 . G . PASS END=97890616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:92:49:0,92,1575:0,92,255:40,0 chr2 97899467 . G . PASS END=97899467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 97899468 . T . PASS END=97899468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 97899469 . G . PASS END=97899503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,854:0,61,255:26,0 chr2 97899504 . A . PASS END=97899504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 97899505 . C . PASS END=97899511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 97899512 . C . PASS END=97899512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 97899513 . A . PASS END=97899514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 97899515 . T . PASS END=97899515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 97899516 . C . PASS END=97899516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 97899517 . A . PASS END=97899517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 97899518 . T . PASS END=97899536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,825:0,69,255:23,0 chr2 97899537 . A . PASS END=97899537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 97899538 . C . PASS END=97899568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,729:0,60,255:24,0 chr2 97899569 . G . PASS END=97899598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 97899599 . A . PASS END=97899608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 97905591 . A . LowDepth;LowGQ END=97905631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 97907003 . A . LowGQ END=97907191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,16:3,0 chr2 97907192 . T . LowDepth;LowGQ END=97907216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 97909583 . A . PASS END=97909766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:44:0,120,1800:0,122,255:40,1 chr2 97910894 . G . PASS END=97910908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 97910909 . G . PASS END=97910915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 97910916 . A . PASS END=97910916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,619:0,27,255:17,0 chr2 97910917 . A . PASS END=97910946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,647:0,54,255:19,0 chr2 97910947 . A . PASS END=97910954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 97910955 . T . PASS END=97910957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 97910958 . C . PASS END=97910958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 97910959 . C . PASS END=97910983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,44,255:19,0 chr2 97910984 . A . PASS END=97910989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 97910990 . A . PASS END=97910990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:19,0 chr2 97910991 . A . PASS END=97910992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 97910993 . C . PASS END=97911010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,576:0,40,255:19,0 chr2 97911011 . T . PASS END=97911011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,598:0,27,255:16,0 chr2 97911012 . A . PASS END=97911034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,615:0,44,255:18,0 chr2 97911035 . A . PASS END=97911036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 97911037 . A . PASS END=97911040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,692:0,44,255:19,0 chr2 97911041 . A . PASS END=97911043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:25,0 chr2 97911044 . C . PASS END=97911050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 97911051 . A . PASS END=97911051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:27,0 chr2 97911052 . C . PASS END=97911057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1141:0,90,255:32,0 chr2 97911058 . A . PASS END=97911058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 97911059 . A . PASS END=97911332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:80:32:0,80,1109:0,80,255:40,1 chr2 97911333 . A . PASS END=97911346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:25,0 chr2 97911347 . A . PASS END=97911347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 97911348 . T . PASS END=97911353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 97911354 . C . PASS END=97911379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,675:0,41,255:19,0 chr2 97911380 . A . PASS END=97911382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 97911383 . T . PASS END=97911391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:14,0 chr2 97911392 . C . PASS END=97911392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 97911393 . T . PASS END=97911395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 97911396 . A . PASS END=97911408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 97911409 . T . PASS END=97911409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 97911410 . T . PASS END=97911411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 97911412 . C . PASS END=97911414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 97911415 . A . PASS END=97911451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,194:6,0 chr2 97911452 . C . LowGQ END=97911595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,55:0,0,55:3,0 chr2 97911596 . C . PASS END=97911603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr2 97911604 . G . LowGQ END=97911604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr2 97911605 . G . PASS END=97911610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 97911611 . G . PASS END=97911611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 97911612 . C . PASS END=97911645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr2 97911646 . A . PASS END=97911646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 97911647 . C . PASS END=97911661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 97911662 . A . PASS END=97911664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,225:0,21,225:7,0 chr2 97911665 . T . PASS END=97911665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 97911666 . G . PASS END=97911666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 97911667 . T . PASS END=97911667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr2 97911668 . G . PASS END=97911686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 97911687 . T . PASS END=97911687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr2 97911688 . T . PASS END=97911690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr2 97911691 . A . PASS END=97911691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,217:0,7,217:7,0 chr2 97911692 . G . PASS END=97911700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 97911701 . A . PASS END=97911701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 97911702 . G . PASS END=97911724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 97911725 . G . PASS END=97911735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:6,0 chr2 97911736 . A . PASS END=97911736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,148:0,4,148:5,0 chr2 97911737 . A . PASS END=97911750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,166:5,0 chr2 97911751 . A . LowGQ END=97911808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,45:0,0,47:3,0 chr2 97913213 . G . LowDepth;LowGQ END=97913365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 97914881 . T . LowDepth END=97914903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr2 97914904 . T . PASS END=97914951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 97915289 . G . LowDepth;LowGQ END=97915382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 97915881 . A . PASS END=97915881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 97915882 . T . PASS END=97915882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:20,0 chr2 97915883 . G . PASS END=97915883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 97915884 . C . PASS END=97915890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 97915891 . T . PASS END=97915891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:22,0 chr2 97915892 . G . PASS END=97915894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 97915895 . T C, 1.02 DRAGENSnpHardQUAL DP=23;MQ=13.12;MQRankSum=-2.742;ReadPosRankSum=1.332;FractionInformativeReads=0.957;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:17,5,0:0.227,0.000:22:8,3,0:9,2,0:7:29,0,11,129,129,129:138,0,255:18,0:1.0210e+00,6.9577e+00,2.0958e+01,1.3579e+02,1.7056e+02,1.3880e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,0,5,0:8,9,3,2:97915895 chr2 97915896 . G A, 1.02 DRAGENSnpHardQUAL DP=23;MQ=13.12;MQRankSum=-2.795;ReadPosRankSum=1.304;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:18,5,0:0.217,0.000:23:8,3,0:10,2,0:7:29,0,11,129,129,129:114,0,255:19,0:1.0210e+00,6.9577e+00,2.0958e+01,1.3579e+02,1.7056e+02,1.3880e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,0,5,0:8,10,3,2:97915895 chr2 97915897 . A . PASS END=97915898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 97915899 . A . PASS END=97915899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 97915900 . G . PASS END=97915904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 98123505 . C . PASS END=98123519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr2 98123520 . C . PASS END=98123520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 98123521 . T . PASS END=98123528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:18,0 chr2 98124027 . C . LowDepth;LowGQ END=98124120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 98124458 . T . LowDepth;LowGQ END=98124528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 98126044 . T . LowDepth END=98126056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 98126057 . T . LowDepth;LowGQ END=98126160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr2 98126161 . A . LowDepth;LowGQ END=98126196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 98127601 . T . PASS END=98127615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr2 98127616 . C . PASS END=98127642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,127:0,15,127:6,0 chr2 98127643 . T . PASS END=98127643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 98127644 . T . PASS END=98127652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 98127653 . T G, 11.52 PASS DP=7;MQ=14.00;MQRankSum=1.495;ReadPosRankSum=0.198;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,2,0:0.286,0.000:7:1,0,0:4,2,0:11:46,0,14,72,171,242:56,0,165:5,0:1.1521e+01,4.0312e-01,1.7403e+01,7.1915e+01,2.0603e+02,2.4577e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,0,2:4,1,2,0 chr2 98127654 . T . PASS END=98127657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 98127658 . T . PASS END=98127658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr2 98127659 . T . PASS END=98127690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,211:0,21,211:9,0 chr2 98127691 . T . PASS END=98127703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 98127704 . T . PASS END=98127704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 98127705 . T . PASS END=98127721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr2 98127722 . A . PASS END=98127735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,225:0,18,225:6,0 chr2 98127736 . A . LowGQ END=98127737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,164:0,0,181:6,0 chr2 98127738 . C . PASS END=98127752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 98127753 . G . LowGQ END=98127754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:0,0,187:6,0 chr2 98127755 . A . PASS END=98127781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr2 98127782 . T . LowGQ END=98127782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:7,0 chr2 98127783 . C . PASS END=98127784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 98127785 . G . PASS END=98127785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr2 98127786 . C . PASS END=98127791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 98127792 . T . PASS END=98127792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr2 98127793 . G . PASS END=98127794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,247:0,21,247:7,0 chr2 98127795 . G . PASS END=98127798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 98127799 . A . PASS END=98127807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,248:0,24,235:8,0 chr2 98127808 . T . PASS END=98127808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 98127809 . T . PASS END=98127810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,242:0,24,242:8,0 chr2 98127811 . C . PASS END=98127811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 98127812 . T . PASS END=98127813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:8,0 chr2 98127814 . T . PASS END=98127814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 98127815 . T . PASS END=98127828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,258:0,24,250:8,0 chr2 98127829 . T . PASS END=98127829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr2 98127830 . T . PASS END=98127832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 98127833 . T . PASS END=98127833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 98127834 . T . PASS END=98127835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 98127836 . T . PASS END=98127836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 98127837 . T . PASS END=98127843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr2 98127844 . A . PASS END=98127847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 98127848 . A . LowGQ END=98127848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,157:10,0,167:5,0 chr2 98127849 . A . PASS END=98127879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,166:0,18,166:6,0 chr2 98127880 . T . PASS END=98127880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr2 98127881 . G . PASS END=98127881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,217:4,0 chr2 98127882 . T . PASS END=98127882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,139:0,1,139:3,0 chr2 98127883 . A . PASS END=98127897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:5,0 chr2 98127898 . G . LowGQ END=98127898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 98127899 . T . PASS END=98127900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 98127901 . C . PASS END=98127927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr2 98127928 . C . PASS END=98127935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 98127936 . G . PASS END=98127946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:3,0 chr2 98127947 . C . PASS END=98127989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:6,0 chr2 98127990 . C . PASS END=98127994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 98127995 . G . PASS END=98128004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 98128005 . G . PASS END=98128041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 98128042 . A . PASS END=98128042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 98128043 . G . PASS END=98128044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:17,0 chr2 98128045 . A . PASS END=98128045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 98128046 . A . PASS END=98128052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr2 98128053 . G . PASS END=98128068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:23,0 chr2 98128069 . A . PASS END=98128069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 98128070 . T . PASS END=98128070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 98128071 . G . PASS END=98128071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 98128072 . A . PASS END=98128084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr2 98128085 . T . PASS END=98128085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 98128086 . C . PASS END=98128087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 98128088 . T . PASS END=98128088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 98128089 . G . PASS END=98128101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,870:0,61,255:25,0 chr2 98128102 . T . PASS END=98128331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1050:0,83,255:40,0 chr2 98128332 . C . PASS END=98128333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1062:0,74,255:26,0 chr2 98128334 . T . PASS END=98128335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 98128336 . C . PASS END=98128336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 98128337 . C . PASS END=98128342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98128343 . A . PASS END=98128344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 98128345 . A . PASS END=98128345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,785:0,48,255:24,0 chr2 98128346 . G . PASS END=98128364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 98128365 . G . PASS END=98128382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr2 98128383 . C . PASS END=98128383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:15,0 chr2 98128384 . A . PASS END=98128385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 98128386 . A . PASS END=98128389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,499:0,31,255:15,0 chr2 98128390 . T . PASS END=98128391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 98128392 . T . PASS END=98128392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 98128393 . T . PASS END=98128394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 98128395 . A . PASS END=98128395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 98128396 . G . PASS END=98128396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,435:0,1,255:13,0 chr2 98128397 . T . PASS END=98128397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 98128398 . A . PASS END=98128398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:14,0 chr2 98128399 . T . PASS END=98128399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 98128400 . T . PASS END=98128401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr2 98128402 . C . LowGQ END=98128402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,435:7,0,255:12,0 chr2 98128403 . T . PASS END=98128403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 98128404 . T . PASS END=98128404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 98128405 . T . PASS END=98128407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 98128408 . C . PASS END=98128408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 98128409 . A . PASS END=98128410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 98128411 . G . PASS END=98128411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:13,0 chr2 98128412 . T . PASS END=98128412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 98128413 . T . PASS END=98128415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 98128416 . G . PASS END=98128416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 98128417 . G . PASS END=98128417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:13,0 chr2 98128418 . T . PASS END=98128426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,535:0,31,255:13,0 chr2 98128427 . G . PASS END=98128427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,449:0,11,255:13,0 chr2 98128428 . T . PASS END=98128428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 98128429 . G . PASS END=98128429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:13,0 chr2 98128430 . T . PASS END=98128430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:12,0 chr2 98128431 . C . PASS END=98128431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:12,0 chr2 98128432 . T . PASS END=98128437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr2 98128438 . C . PASS END=98128438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:10,0 chr2 98128439 . A . PASS END=98128439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:11,0 chr2 98128440 . G . PASS END=98128440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:12,0 chr2 98128441 . C . PASS END=98128450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,496:0,32,255:13,0 chr2 98128451 . G . PASS END=98128471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:19,0 chr2 98128472 . C . PASS END=98128472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 98128473 . G . PASS END=98128476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 98128477 . T . PASS END=98128481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 98128482 . G . PASS END=98128482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 98128483 . C . PASS END=98128515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,762:0,63,255:24,0 chr2 98129643 . C . PASS END=98129644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 98129645 . G . PASS END=98129681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,137,255:40,0 chr2 98129682 . T C, 22.09 PASS DP=68;MQ=20.85;MQRankSum=0.954;ReadPosRankSum=2.735;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,25,0:0.368,0.000:68:23,9,0:20,16,0:22:57,0,28,850,1441,2290:255,0,255:40,0:2.2085e+01,3.0401e-02,3.1030e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:31,12,13,12:23,20,13,12 chr2 98129683 . G . PASS END=98129719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:69:0,120,1800:0,160,255:40,0 chr2 98129720 . C . PASS END=98129826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:89:0,120,1800:0,241,255:40,0 chr2 98132195 . C . LowDepth END=98132408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr2 98133443 . T . PASS END=98133449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 98133450 . A . PASS END=98133451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 98133452 . A . PASS END=98133452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 98133453 . T . LowGQ END=98133453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,263:0,0,255:9,0 chr2 98133766 . T . LowDepth;LowGQ END=98133806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 98138525 . C . PASS END=98138535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1238:0,94,255:37,0 chr2 98139789 . C . PASS END=98139816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:6,0 chr2 98139817 . G . PASS END=98139831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 98139832 . C . PASS END=98139845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 98139846 . A . PASS END=98139846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 98139847 . A . PASS END=98139917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,352:0,36,255:13,0 chr2 98139918 . T . PASS END=98139918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 98139919 . T . PASS END=98139930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 98148774 . C . PASS END=98148779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 98148780 . C . PASS END=98148780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 98148781 . T . PASS END=98148781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 98148782 . G . PASS END=98148788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:28,0 chr2 98148789 . T . PASS END=98148789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 98148790 . T . PASS END=98148791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 98148792 . A . PASS END=98148792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 98148793 . T . PASS END=98148810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,944:0,87,255:30,0 chr2 98148811 . T . PASS END=98148811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 98148812 . G . PASS END=98148822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 98148823 . G . PASS END=98148827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 98148828 . C . PASS END=98148828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98148829 . A . PASS END=98148847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,933:0,65,255:26,0 chr2 98152763 . C . PASS END=98152772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,772:0,62,255:26,0 chr2 98152773 . T . PASS END=98152778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 98152779 . T . PASS END=98152779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr2 98152780 . A . PASS END=98152780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:26,0 chr2 98152781 . C . LowGQ END=98152781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,7:28:0:28:0,0,496:55,0,255:19,0 chr2 98152782 . C . PASS END=98152782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:19:28:0,19,659:0,19,255:22,0 chr2 98152783 . T . PASS END=98152797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,855:0,67,255:26,0 chr2 98152798 . G . PASS END=98152801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 98152802 . T . PASS END=98152802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,930:0,67,255:27,0 chr2 98152803 . A . PASS END=98152817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:28,0 chr2 98152818 . T . PASS END=98152818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:27,0 chr2 98152819 . T . PASS END=98152819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 98152820 . T . PASS END=98152820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98152821 . A . PASS END=98152821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:25,0 chr2 98152822 . T . PASS END=98152822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:25,0 chr2 98152823 . T . PASS END=98152825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 98152826 . C . PASS END=98152835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 98152931 . C . PASS END=98152959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1148:0,86,255:33,0 chr2 98154631 . C . PASS END=98154660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:65:0,120,1800:0,180,255:40,0 chr2 98154661 . T . PASS END=98154703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,146,255:40,0 chr2 98154798 . C . PASS END=98154826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,99,1504:0,99,255:40,0 chr2 98156185 . C . PASS END=98156185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 98156186 . A . PASS END=98156186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 98156187 . C . PASS END=98156188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 98156497 . C . PASS END=98156520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,491:0,45,255:15,0 chr2 98156521 . T . PASS END=98156521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr2 98156522 . T . PASS END=98156525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 98156526 . T . PASS END=98156526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 98156527 . C . PASS END=98156529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 98156530 . T . PASS END=98156536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 98156537 . A . PASS END=98156537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr2 98156538 . T . PASS END=98156538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 98156539 . T . PASS END=98156539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr2 98156540 . C . PASS END=98156542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 98156543 . A . PASS END=98156546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 98156547 . G . PASS END=98156557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 98156558 . A . PASS END=98156561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 98156562 . C . PASS END=98156564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 98156565 . G . PASS END=98156569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 98156664 . C . PASS END=98156692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr2 98158297 . C . PASS END=98158420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:32:0,80,1164:0,80,255:40,0 chr2 98158421 . A . PASS END=98158425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 98158426 . A . PASS END=98158426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:25,0 chr2 98158427 . T . PASS END=98158435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:25,0 chr2 98158436 . A . PASS END=98158446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:26:0,45,720:0,45,255:19,0 chr2 98158542 . C . PASS END=98158542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr2 98158543 . T . PASS END=98158543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 98158544 . T . PASS END=98158544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 98158545 . C . PASS END=98158546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 98158547 . A . PASS END=98158547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 98158548 . G . PASS END=98158549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 98158550 . C . PASS END=98158556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 98158557 . T . PASS END=98158558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 98158559 . T . PASS END=98158563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 98158564 . G . PASS END=98158564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 98158565 . A . PASS END=98158567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 98158568 . A . PASS END=98158568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 98158569 . C . PASS END=98158570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr2 98160253 . C . PASS END=98160266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr2 98160267 . T . PASS END=98160267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 98160268 . G . PASS END=98160285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr2 98160286 . T . LowDepth END=98160325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr2 98160420 . C . PASS END=98160448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 98162129 . C . PASS END=98162164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,582:0,41,255:19,0 chr2 98162165 . C . PASS END=98162165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:14,0 chr2 98162166 . C . PASS END=98162177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr2 98162178 . A . PASS END=98162178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 98162179 . G . PASS END=98162185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 98162186 . C . PASS END=98162201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:13,0 chr2 98162296 . C . PASS END=98162310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr2 98162311 . T . PASS END=98162311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,536:0,37,255:17,0 chr2 98162312 . T . PASS END=98162318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 98162319 . A . PASS END=98162319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 98162320 . A . PASS END=98162324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr2 98163671 . T . PASS END=98163696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,162,255:40,0 chr2 98163889 . T . PASS END=98163889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 98163890 . G . PASS END=98163926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:62:0,120,1800:0,159,255:40,0 chr2 98163927 . A T, 47.05 PASS DP=65;MQ=116.48;MQRankSum=-6.298;ReadPosRankSum=3.237;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,35,0:0.547,0.000:64:14,17,0:15,18,0:46:82,0,49,1236,1000,2236:255,0,255:28,0:4.7050e+01,1.1338e-04,5.1933e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,15,20:14,15,15,20 chr2 98163928 . G . PASS END=98163964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,163,255:40,0 chr2 98163999 . C . PASS END=98164019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,161,255:40,0 chr2 98164020 . C T, 44.75 PASS DP=60;MQ=95.51;MQRankSum=-6.172;ReadPosRankSum=2.151;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,30,0:0.500,0.000:60:18,12,0:12,18,0:43:80,0,45,180,180,180:255,0,255:28,0:4.4750e+01,2.1305e-04,4.8081e+01,1.7952e+02,2.1429e+02,1.8253e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,11,8,22:15,15,16,14:98164020 chr2 98164021 . T C, 44.75 PASS DP=61;MQ=95.16;MQRankSum=-6.225;ReadPosRankSum=1.883;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:30,31,0:0.508,0.000:61:18,13,0:12,18,0:43:80,0,45,180,180,180:255,0,255:28,0:4.4750e+01,2.1305e-04,4.8081e+01,1.7952e+02,2.1429e+02,1.8253e+02:0.00,34.77,37.78,34.77,69.54,37.78:19,11,9,22:15,15,17,14:98164020 chr2 98164022 . T . PASS END=98164071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,129,255:40,0 chr2 98164166 . C . PASS END=98164183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,126,255:40,0 chr2 98164184 . C G, 46.26 PASS DP=50;MQ=97.08;MQRankSum=-0.689;ReadPosRankSum=0.592;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,24,0:0.480,0.000:50:12,8,0:14,16,0:45:81,0,47,859,930,1788:255,0,255:24,0:4.6265e+01,1.4238e-04,5.0400e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,16,10,14:16,10,16,8 chr2 98164185 . T . PASS END=98164194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,134,255:40,0 chr2 98165882 . C . PASS END=98165890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1233:0,89,255:35,0 chr2 98165891 . A . PASS END=98165891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1066:0,57,255:33,0 chr2 98165892 . T . PASS END=98165928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,101,1275:0,101,255:38,0 chr2 98165929 . A . PASS END=98165929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr2 98165930 . C . PASS END=98165943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1365:0,98,255:35,0 chr2 98165944 . A . PASS END=98165954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:26,0 chr2 98166049 . C . PASS END=98166053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1142:0,96,255:32,0 chr2 98166054 . A . PASS END=98166054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1080:0,65,255:31,0 chr2 98166055 . G . PASS END=98166099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1217:0,86,255:35,0 chr2 98167752 . C . PASS END=98167824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:73:0,120,1800:0,193,255:40,1 chr2 98167915 . C . PASS END=98167943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,120,1800:0,122,255:40,0 chr2 98169631 . C . PASS END=98169634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr2 98169635 . C . PASS END=98169635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 98169636 . C . PASS END=98169638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr2 98169639 . G . PASS END=98169639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr2 98169640 . A . PASS END=98169640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 98169641 . T . PASS END=98169641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,998:0,21,255:27,0 chr2 98169642 . T . PASS END=98169642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 98169643 . T . PASS END=98169644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 98169645 . T . PASS END=98169648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,986:0,60,255:28,0 chr2 98169649 . C . PASS END=98169649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 98169650 . A . PASS END=98169652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:26,0 chr2 98169653 . C . PASS END=98169653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 98169654 . T . PASS END=98169654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:27,0 chr2 98169655 . T . PASS END=98169657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 98169658 . T . PASS END=98169658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 98169659 . T . PASS END=98169660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 98169661 . C . PASS END=98169661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,923:0,57,255:27,0 chr2 98169662 . T . PASS END=98169662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 98169663 . G . PASS END=98169664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 98169665 . G . PASS END=98169665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 98169666 . G . PASS END=98169666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 98169667 . C . PASS END=98169667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:28,0 chr2 98169668 . T . PASS END=98169668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:28,0 chr2 98169669 . A . PASS END=98169670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 98169671 . A . PASS END=98169675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,981:0,76,255:29,0 chr2 98169676 . A . PASS END=98169676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 98169677 . A . PASS END=98169677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 98169678 . A . PASS END=98169678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:23,0 chr2 98169679 . C . PASS END=98169682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:23,0 chr2 98169683 . A . PASS END=98169692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:23:0,48,720:0,64,255:19,0 chr2 98169693 . T . PASS END=98169695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:36:21:0,36,540:0,50,255:12,0 chr2 98169696 . G . PASS END=98169703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,50,255:16,0 chr2 98169806 . C . PASS END=98169806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 98169807 . T . PASS END=98169807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,827:0,45,255:23,0 chr2 98169808 . T . PASS END=98169827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,856:0,61,255:26,0 chr2 98169828 . G . PASS END=98169828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr2 98169829 . A . PASS END=98169834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,886:0,64,255:26,0 chr2 98171523 . C . PASS END=98171595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,105,1496:0,105,255:40,0 chr2 98171689 . C . PASS END=98171717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1298:0,103,255:40,0 chr2 98173400 . C . PASS END=98173411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:104:0,120,1800:0,255,255:40,0 chr2 98173412 . T . PASS END=98173472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,1:122:99:113:0,120,1800:0,255,255:40,0 chr2 98173567 . C . PASS END=98173595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,147,255:40,0 chr2 98175262 . C . PASS END=98175334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:40:0,81,1308:0,81,255:40,0 chr2 98175429 . C . PASS END=98175457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,114,1710:0,120,255:40,0 chr2 98177128 . C . PASS END=98177128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:35,0 chr2 98177129 . T . PASS END=98177161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1288:0,92,255:40,0 chr2 98177162 . G . PASS END=98177200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,143,255:40,0 chr2 98177295 . C . PASS END=98177304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:53:0,120,1800:0,143,255:40,0 chr2 98177305 . C . LowGQ END=98177305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,7:54:0:54:0,0,1543:65,0,255:40,0 chr2 98177306 . G . PASS END=98177323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,142,255:40,0 chr2 98192842 . C . PASS END=98192909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,134,255:40,0 chr2 98195369 . A . PASS END=98195506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:93:46:0,93,1395:0,138,255:40,0 chr2 98196925 . C . PASS END=98197031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:59:0,120,1800:0,133,255:40,0 chr2 98201401 . C . PASS END=98201413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1172:0,87,255:31,0 chr2 98201414 . C . PASS END=98201414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 98201415 . A . PASS END=98201580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:31:0,90,1313:0,92,255:40,0 chr2 98201747 . C . PASS END=98201861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:53:0,90,1800:0,90,255:40,1 chr2 98205988 . C . PASS END=98206148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:38:0,96,1404:0,101,255:40,0 chr2 98262550 . A . PASS END=98262552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 98262553 . G . PASS END=98262553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 98262554 . C . PASS END=98262571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,676:0,57,255:19,0 chr2 98262572 . G . PASS END=98262591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 98262592 . C . PASS END=98262636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,552:0,48,255:18,0 chr2 98262637 . T . PASS END=98262637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 98262638 . C . PASS END=98262652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 98263530 . G . PASS END=98263603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,114,1710:0,123,255:40,0 chr2 98263807 . G . PASS END=98263906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,114,1710:0,118,255:40,0 chr2 98264459 . G . PASS END=98264461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,690:0,44,255:19,0 chr2 98264462 . A . PASS END=98264470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:22,0 chr2 98264471 . A . PASS END=98264471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 98264472 . T . PASS END=98264494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,861:0,69,255:26,0 chr2 98264495 . T . PASS END=98264507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 98264508 . G . PASS END=98264508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 98264509 . G . PASS END=98264516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 98264517 . A . PASS END=98264517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 98264518 . T . PASS END=98264533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:24:0,71,908:0,71,255:25,0 chr2 98264534 . C . PASS END=98264534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 98264535 . C . PASS END=98264551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 98264552 . C . PASS END=98264554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 98264555 . A G, 49.61 PASS DP=22;MQ=249.16;MQRankSum=2.341;ReadPosRankSum=2.605;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,10,0:0.455,0.000:22:6,7,0:6,3,0:48:84,0,50,358,427,785:255,0,255:10,0:4.9606e+01,6.9375e-05,5.3000e+01,3.5766e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,3,7:5,7,4,6 chr2 98264556 . G . PASS END=98264569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,44,255:18,0 chr2 98264570 . G . PASS END=98264571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 98273321 . C . PASS END=98273327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:29,0 chr2 98273328 . G . PASS END=98273329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 98273330 . T . PASS END=98273330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,906:0,51,255:29,0 chr2 98273331 . T . PASS END=98273353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1109:0,80,255:40,0 chr2 98273354 . A . PASS END=98273354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1413:0,74,255:40,0 chr2 98273355 . T . PASS END=98273388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:42:0,82,1431:0,82,255:40,0 chr2 98273389 . T . PASS END=98273389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1281:0,51,255:36,0 chr2 98273390 . C . PASS END=98273397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:40:0,87,1319:0,87,255:38,0 chr2 98273398 . T . PASS END=98273398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1233:0,42,255:35,0 chr2 98273399 . G . PASS END=98273423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1329:0,92,255:38,0 chr2 98273615 . C . PASS END=98273623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,961:0,65,255:26,0 chr2 98273624 . G . PASS END=98273655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,842:0,64,255:25,0 chr2 98273911 . C . PASS END=98273972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,110,1506:0,110,255:40,0 chr2 98274406 . C . PASS END=98274423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 98274424 . C . PASS END=98274424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 98274425 . A . PASS END=98274445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,892:0,61,255:26,0 chr2 98274446 . G . PASS END=98274447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98274448 . A . PASS END=98274450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 98274451 . G . PASS END=98274451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 98274452 . C . PASS END=98274453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:27:0,77,1116:0,77,255:29,0 chr2 98274454 . T . PASS END=98274489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1155:0,86,255:34,0 chr2 98274490 . A . PASS END=98274512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1193:0,89,255:34,0 chr2 98274513 . T . PASS END=98274513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:26,0 chr2 98274514 . C . PASS END=98274526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,89,255:31,0 chr2 98274527 . G C, 41.33 PASS DP=32;MQ=249.03;MQRankSum=4.416;ReadPosRankSum=0.444;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,10,0:0.323,0.000:31:13,4,0:8,6,0:41:76,0,50,342,751,1092:255,0,255:21,0:4.1329e+01,3.4145e-04,5.3000e+01,3.4163e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,7,3:10,11,5,5 chr2 98274528 . A . PASS END=98274547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1080:0,87,255:30,0 chr2 98274548 . C . PASS END=98274554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 98274555 . G . PASS END=98274555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:24,0 chr2 98274556 . G . PASS END=98274564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 98274565 . A . PASS END=98274580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:24,0 chr2 98274687 . A . PASS END=98274779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:31:0,90,1132:0,93,255:40,0 chr2 98274890 . C . PASS END=98274893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr2 98274894 . T . PASS END=98274894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr2 98274895 . T . PASS END=98274899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 98274900 . G . PASS END=98274908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 98274909 . A . PASS END=98274921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,898:0,89,255:30,0 chr2 98274922 . C . PASS END=98274922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 98274923 . C . PASS END=98274923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 98274924 . G . PASS END=98274924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:29,0 chr2 98274925 . A . PASS END=98274925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 98274926 . G . PASS END=98274926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1029:0,60,255:28,0 chr2 98274927 . G . PASS END=98275070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:33:0,86,1202:0,86,255:40,0 chr2 98275071 . T . PASS END=98275071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1213:0,72,255:30,0 chr2 98275072 . C . PASS END=98275081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1147:0,80,255:32,0 chr2 98275082 . T . PASS END=98275082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 98275083 . C . PASS END=98275088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 98275089 . G . PASS END=98275106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,937:0,62,255:26,0 chr2 98275342 . A . PASS END=98275437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1122:0,83,255:36,0 chr2 98275438 . A . PASS END=98275461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,63,255:26,0 chr2 98275462 . G . PASS END=98275466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:22:0,45,675:0,50,255:18,0 chr2 98275815 . C . PASS END=98275940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:83:32:0,83,1208:0,83,255:40,0 chr2 98277034 . C . PASS END=98277046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,690:0,44,255:19,0 chr2 98277047 . C . PASS END=98277058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 98277059 . T . PASS END=98277062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 98277063 . C . PASS END=98277077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 98277078 . C . PASS END=98277080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 98277081 . T . PASS END=98277081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 98277082 . C . PASS END=98277089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,836:0,53,255:19,0 chr2 98277090 . T . PASS END=98277094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 98277095 . T . PASS END=98277095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 98277096 . T . PASS END=98277103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 98277104 . C . PASS END=98277104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr2 98277105 . C . PASS END=98277107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 98277108 . C . PASS END=98277109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 98278345 . T . PASS END=98278409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:35:0,90,1350:0,105,255:40,0 chr2 98280306 . G . PASS END=98280306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 98280307 . T . PASS END=98280316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,789:0,61,255:26,0 chr2 98280317 . C . PASS END=98280322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98280323 . G . PASS END=98280323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 98280324 . C . PASS END=98280326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 98280327 . G . PASS END=98280336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,893:0,64,255:26,0 chr2 98280337 . A . PASS END=98280337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:25,0 chr2 98280338 . T . PASS END=98280339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr2 98280340 . T . PASS END=98280340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr2 98280341 . C . PASS END=98280341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:24,0 chr2 98280342 . G . PASS END=98280342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:23,0 chr2 98280343 . T . PASS END=98280350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:25,0 chr2 98280351 . C . PASS END=98280352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,831:0,44,255:20,0 chr2 98280353 . T . PASS END=98280353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 98280404 . A . PASS END=98280408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,476:0,31,255:11,0 chr2 98280409 . C . PASS END=98280409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:10,0 chr2 98280410 . G . PASS END=98280412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 98280413 . C . PASS END=98280413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:10,0 chr2 98280414 . G . PASS END=98280416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 98280417 . C . PASS END=98280417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,321:0,5,255:10,0 chr2 98280418 . G . PASS END=98280420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 98280421 . A . PASS END=98280422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 98280423 . G . PASS END=98280426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 98280427 . G . PASS END=98280427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 98280428 . G . PASS END=98280430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 98280431 . C . PASS END=98280431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr2 98280432 . G . PASS END=98280451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,474:0,36,255:13,0 chr2 98280452 . C . PASS END=98280452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 98280453 . G . PASS END=98280455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 98280456 . G . PASS END=98280464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 98280465 . C . PASS END=98280465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:17,0 chr2 98280466 . C . PASS END=98280468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,651:0,41,255:19,0 chr2 98280469 . C . PASS END=98280470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr2 98280471 . C . PASS END=98280471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr2 98280472 . G . PASS END=98280477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:22,0 chr2 98280478 . G . PASS END=98280478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr2 98280479 . C . PASS END=98280479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 98280480 . A . PASS END=98280485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 98280486 . C . PASS END=98280486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,774:0,53,255:19,0 chr2 98280487 . G . PASS END=98280497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 98280498 . G . PASS END=98280498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 98280499 . G . PASS END=98280501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 98280502 . C . PASS END=98280502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 98280503 . T . PASS END=98280503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,584:0,15,255:18,0 chr2 98280504 . T . PASS END=98280528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr2 98280529 . A . PASS END=98280529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:16,0 chr2 98280530 . T . PASS END=98280536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 98280537 . T . PASS END=98280537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:18,0 chr2 98280538 . C . PASS END=98280543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:24,0 chr2 98280544 . T . PASS END=98280544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 98280545 . G . PASS END=98280556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr2 98280557 . A . PASS END=98280557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 98280558 . G . PASS END=98280558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 98280559 . C . PASS END=98280559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 98280560 . A . PASS END=98280560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 98280561 . G . PASS END=98280561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 98280562 . G . PASS END=98280563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 98280564 . G . PASS END=98280564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:19,0 chr2 98280565 . C . PASS END=98280571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 98280572 . C . PASS END=98280573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 98280574 . G . PASS END=98280574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 98280575 . G . PASS END=98280576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 98280577 . T . PASS END=98280577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr2 98280578 . G . PASS END=98280579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 98280580 . G . PASS END=98280580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 98280581 . C . PASS END=98280581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 98280582 . G . PASS END=98280583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 98280584 . A . PASS END=98280584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,621:0,8,255:18,0 chr2 98280585 . G . PASS END=98280586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:18,0 chr2 98280587 . G . PASS END=98280587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:17,0 chr2 98280588 . G . PASS END=98280591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:18,0 chr2 98280592 . G . PASS END=98280592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 98280593 . G . PASS END=98280593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:12,0 chr2 98280594 . G . PASS END=98280603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:36:18:0,36,540:0,37,255:13,0 chr2 98280604 . G . PASS END=98280605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr2 98280606 . T . PASS END=98280606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:15,0 chr2 98280607 . G . PASS END=98280614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 98280615 . A . PASS END=98280615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 98280616 . A . PASS END=98280631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 98280632 . A . PASS END=98280632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 98280633 . A . PASS END=98280636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,332:0,36,255:13,0 chr2 98280637 . G . PASS END=98280637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 98280638 . T . PASS END=98280645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 98280646 . G . PASS END=98280646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 98280647 . C . PASS END=98280656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr2 98286252 . A . PASS END=98286272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,102,1530:0,117,255:40,0 chr2 98286273 . T . PASS END=98286297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,99,1380:0,101,255:39,0 chr2 98287939 . A . PASS END=98287962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1374:0,103,255:40,0 chr2 98290919 . A . PASS END=98291024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,179,255:40,0 chr2 98292094 . A . PASS END=98292094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 98292095 . C . PASS END=98292096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 98292097 . A . PASS END=98292102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr2 98292103 . A . PASS END=98292103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr2 98292104 . A . PASS END=98292105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 98292106 . T . PASS END=98292107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 98292108 . A . PASS END=98292118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:35,0 chr2 98292119 . T . PASS END=98292119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:33,0 chr2 98292120 . G . PASS END=98292161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1187:0,88,255:36,0 chr2 98292308 . G . PASS END=98292391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:66:0,120,1800:0,143,255:40,0 chr2 98293882 . A . PASS END=98293889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 98305358 . A . PASS END=98305456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,152,255:40,0 chr2 98306719 . G . PASS END=98306790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,137,255:40,0 chr2 98315469 . A . PASS END=98315599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,120,1800:0,131,255:40,0 chr2 98317617 . A . PASS END=98317623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:23,0 chr2 98317624 . C . PASS END=98317626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 98317627 . T . PASS END=98317627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 98317628 . A . PASS END=98317634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1150:0,90,255:32,0 chr2 98317635 . T . PASS END=98317635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 98317636 . G . PASS END=98317647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1235:0,99,255:35,0 chr2 98317648 . G . PASS END=98317684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1349:0,98,255:38,0 chr2 98317685 . G A, 45.20 PASS DP=37;MQ=250.00;MQRankSum=5.026;ReadPosRankSum=4.463;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,14,0:0.378,0.000:37:10,7,0:13,7,0:45:80,0,50,493,823,1315:255,0,255:21,0:4.5196e+01,1.5299e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,7,7:9,14,6,8 chr2 98317686 . C . PASS END=98317725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1155:0,83,255:33,0 chr2 98317726 . G . PASS END=98317730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 98317731 . T . PASS END=98317736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 98317737 . T . PASS END=98317762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,868:0,69,255:25,0 chr2 98317763 . C . PASS END=98317767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:16,0 chr2 98318524 . G . PASS END=98318526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 98318527 . C . PASS END=98318539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 98319132 . A . PASS END=98319264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:56:0,118,1734:0,118,255:40,0 chr2 98329732 . A . PASS END=98329734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 98329735 . A . PASS END=98329735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:29,0 chr2 98329736 . G . PASS END=98329744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1042:0,82,255:33,0 chr2 98329745 . C . PASS END=98329745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1117:0,60,255:32,0 chr2 98329746 . T . PASS END=98329754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:33:0,89,1233:0,89,255:33,0 chr2 98329755 . T . PASS END=98329755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1180:0,53,255:31,0 chr2 98329756 . C . PASS END=98329776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1174:0,92,255:33,0 chr2 98329777 . C . PASS END=98329777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:31,0 chr2 98329778 . C . PASS END=98329783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1188:0,96,255:32,0 chr2 98329784 . C . PASS END=98329784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr2 98329785 . A . PASS END=98329786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 98330021 . G . PASS END=98330021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 98330029 . G . PASS END=98330029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 98330030 . A . PASS END=98330032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 98330033 . T . PASS END=98330035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:15,0 chr2 98330036 . G . PASS END=98330040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr2 98330041 . T . PASS END=98330041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 98330042 . T . PASS END=98330050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 98330051 . G . PASS END=98330051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 98330052 . C A, 50.00 PASS DP=17;MQ=250.00;MQRankSum=2.583;ReadPosRankSum=2.205;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,14,0:0.824,0.000:17:1,6,0:2,8,0:35:85,0,32,485,78,563:255,0,43:3,0:5.0001e+01,1.4576e-03,3.4873e+01,4.5000e+02,1.1325e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,1,8,6:2,1,8,6 chr2 98330053 . C . PASS END=98330089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:18,0 chr2 98330090 . G . PASS END=98330093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:19,0 chr2 98330094 . G . PASS END=98330102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 98330103 . A . PASS END=98330103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 98330104 . C . PASS END=98330106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 98330107 . T . PASS END=98330119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,720:0,44,255:19,0 chr2 98330120 . T . PASS END=98330120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 98330121 . G . PASS END=98330131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 98330132 . A . PASS END=98330132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:13,0 chr2 98330133 . T . PASS END=98330137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 98330379 . A . PASS END=98330457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:86:40:0,86,1342:0,86,255:40,0 chr2 98331027 . A . PASS END=98331029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 98331030 . T . PASS END=98331030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr2 98331031 . G . PASS END=98331038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 98331039 . G . PASS END=98331039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 98331040 . G . PASS END=98331070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,808:0,61,255:26,0 chr2 98331071 . G . PASS END=98331072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 98331073 . C . PASS END=98331116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,869:0,69,255:26,0 chr2 98331117 . A . PASS END=98331117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr2 98331118 . C . PASS END=98331121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 98331122 . A . PASS END=98331122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 98331123 . G . PASS END=98331125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 98331126 . C . PASS END=98331126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 98331127 . A . PASS END=98331131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 98340479 . G . PASS END=98340479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 98340480 . T . PASS END=98340490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 98340491 . C . PASS END=98340491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 98340492 . C . PASS END=98340492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 98340493 . A . PASS END=98340496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 98340497 . G . PASS END=98340499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 98340500 . A . PASS END=98340527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:24,0 chr2 98340528 . T . PASS END=98340528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 98340529 . C . PASS END=98340628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,770:0,63,255:24,0 chr2 98340629 . G . PASS END=98340629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:18,0 chr2 98340630 . G . PASS END=98340638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 98340639 . T . PASS END=98340650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:17:0,36,540:0,51,255:13,0 chr2 98340651 . T . PASS END=98340690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,531:0,45,255:16,0 chr2 98340691 . G . PASS END=98340696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 98340697 . C . PASS END=98340698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 98340699 . G . PASS END=98340700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 98340701 . A . PASS END=98340713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:14,0 chr2 98340714 . C . PASS END=98340743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,451:0,32,255:14,0 chr2 98340744 . A . PASS END=98340744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 98340745 . G . PASS END=98340767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr2 98340768 . A . PASS END=98340768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 98340769 . C . PASS END=98340773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 98340774 . A . PASS END=98340776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 98340777 . G . PASS END=98340778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 98340779 . C . PASS END=98340788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 98340789 . A . PASS END=98340789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr2 98340790 . C . PASS END=98340802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 98340803 . T . PASS END=98340803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 98340804 . G . PASS END=98340806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 98340807 . A . PASS END=98340832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 98340833 . C . PASS END=98340833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 98340834 . C . PASS END=98340836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 98340837 . G . PASS END=98340838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 98340839 . G . PASS END=98340859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 98340860 . G . PASS END=98340860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 98340861 . C . PASS END=98340865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 98340866 . G . PASS END=98340874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 98340875 . T . PASS END=98340875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 98340876 . A . PASS END=98340887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,374:0,33,255:11,0 chr2 98340888 . C . PASS END=98340888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 98340889 . G . PASS END=98340901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 98341552 . T . PASS END=98341552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 98341555 . G . PASS END=98341560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 98341561 . G . PASS END=98341652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1039:0,81,255:40,0 chr2 98341653 . C . PASS END=98341653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr2 98341654 . C . PASS END=98341661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 98341662 . T . PASS END=98341690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr2 98341691 . G . PASS END=98341715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 98349346 . G . PASS END=98349369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,553:0,44,255:19,0 chr2 98349370 . C . PASS END=98349380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 98349381 . T . PASS END=98349381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr2 98349382 . G . PASS END=98349391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,933:0,78,255:26,0 chr2 98349392 . T . PASS END=98349393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 98349394 . T . PASS END=98349394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr2 98349395 . G . PASS END=98349434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1257:0,87,255:35,0 chr2 98349435 . C . PASS END=98349435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:32,0 chr2 98349436 . G . PASS END=98349438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 98349439 . C . PASS END=98349441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1166:0,63,255:33,0 chr2 98349442 . G . PASS END=98349443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:32,0 chr2 98349444 . A . PASS END=98349445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:31,0 chr2 98349446 . T . PASS END=98349447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 98349448 . C . PASS END=98349448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr2 98349449 . A . PASS END=98349452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1155:0,80,255:31,0 chr2 98349453 . C . PASS END=98349453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 98349454 . C . PASS END=98349455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:31,0 chr2 98349456 . A . PASS END=98349456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr2 98349457 . G . PASS END=98349459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr2 98349460 . C . PASS END=98349460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:29,0 chr2 98349461 . A . PASS END=98349461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:29,0 chr2 98349462 . C . PASS END=98349462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:28,0 chr2 98349463 . C . PASS END=98349463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1208:0,83,255:29,0 chr2 98349464 . A . PASS END=98349464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:28,0 chr2 98349465 . A . PASS END=98349470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:29,0 chr2 98349471 . A . PASS END=98349484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr2 98349588 . C . PASS END=98349595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:21,0 chr2 98349596 . G . PASS END=98349596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 98349597 . T . PASS END=98349599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 98349600 . C . PASS END=98349600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 98349601 . T . PASS END=98349602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 98349603 . A . PASS END=98349604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 98349605 . G . PASS END=98349623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:27,0 chr2 98349624 . A . PASS END=98349631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 98349632 . C . PASS END=98349632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 98349633 . C . PASS END=98349644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 98349645 . T . PASS END=98349675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,955:0,74,255:26,0 chr2 98349681 . G . PASS END=98349681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 98349684 . A . PASS END=98349684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 98349757 . C . PASS END=98349757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 98349759 . G . PASS END=98349759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 98349760 . G . PASS END=98349766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:34:17:0,34,540:0,34,255:13,0 chr2 98349767 . T . PASS END=98349767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:11,0 chr2 98349768 . G . PASS END=98349768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr2 98349769 . C . PASS END=98349769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:11,0 chr2 98349770 . T . PASS END=98349776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,495:0,32,255:13,0 chr2 98349777 . C . PASS END=98349786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:15,0 chr2 98349787 . A . PASS END=98349787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 98349788 . C . PASS END=98349800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 98349801 . A . PASS END=98349804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 98349805 . A . PASS END=98349805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 98349806 . T . PASS END=98349806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr2 98349812 . T . PASS END=98349812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,677:0,35,255:21,0 chr2 98349927 . G . PASS END=98349927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 98350007 . C . PASS END=98350024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1286:0,89,255:35,0 chr2 98350025 . A . PASS END=98350025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:34,0 chr2 98350026 . C . PASS END=98350058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1271:0,89,255:36,0 chr2 98350983 . C . PASS END=98350983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 98350984 . A . PASS END=98350984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 98350985 . C . PASS END=98350986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 98350987 . C . PASS END=98350987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 98350988 . A . PASS END=98351145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1133:0,80,255:40,0 chr2 98351146 . A . PASS END=98351166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:24:0,60,900:0,72,255:26,0 chr2 98351167 . C . PASS END=98351175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:17,0 chr2 98351183 . C . PASS END=98351183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 98351710 . C . PASS END=98351710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 98351713 . G . PASS END=98351722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,900:0,69,255:25,0 chr2 98351723 . G . PASS END=98351723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 98351724 . A . PASS END=98351725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,945:0,75,255:25,0 chr2 98351726 . G . PASS END=98351726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 98351727 . T . PASS END=98351751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,894:0,62,255:26,0 chr2 98351752 . C . PASS END=98351752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 98351753 . A . PASS END=98351753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 98351754 . C . PASS END=98351785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1094:0,84,255:30,0 chr2 98351786 . G . PASS END=98351786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 98351787 . A . PASS END=98351798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 98351799 . T . PASS END=98351799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 98351800 . G . PASS END=98351801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 98351802 . A . PASS END=98351802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 98351803 . C . PASS END=98351812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1141:0,93,255:31,0 chr2 98351813 . A . PASS END=98351814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:24,0 chr2 98351815 . C . PASS END=98351833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 98351834 . A . PASS END=98351834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 98351835 . T . PASS END=98351835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 98351836 . T . PASS END=98351836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:28,0 chr2 98351837 . G . PASS END=98351843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr2 98351844 . G . PASS END=98351844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 98351845 . C . PASS END=98351848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 98351849 . G . PASS END=98351849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 98351850 . C . PASS END=98351852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr2 98351853 . A . PASS END=98351858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 98351859 . T . PASS END=98351859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,915:0,54,255:23,0 chr2 98351860 . C . PASS END=98351895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 98351896 . G . PASS END=98351896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 98351897 . C . PASS END=98351898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 98351899 . C . PASS END=98351919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,665:0,41,255:19,0 chr2 98351923 . A . PASS END=98351923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 98353931 . C . PASS END=98353931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr2 98353936 . G . PASS END=98354090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1074:0,80,255:40,0 chr2 98354091 . T . PASS END=98354101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:24,0 chr2 98354102 . C . PASS END=98354102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 98354103 . T . PASS END=98354103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:20,0 chr2 98354104 . G . PASS END=98354106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 98354107 . T . PASS END=98354116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,698:0,44,255:19,0 chr2 98354117 . A . PASS END=98354117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,44,255:12,0 chr2 98354118 . G . PASS END=98354128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:16,0 chr2 98354220 . G . PASS END=98354256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,792:0,63,255:26,0 chr2 98354257 . C . PASS END=98354261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 98354262 . G . PASS END=98354265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 98354266 . G . PASS END=98354274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1057:0,87,255:29,0 chr2 98354275 . T . PASS END=98354276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 98354277 . C . PASS END=98354283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 98354284 . T . PASS END=98354284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:28,0 chr2 98354285 . C . PASS END=98354298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 98354299 . A . PASS END=98354330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr2 98354331 . G . PASS END=98354331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 98354332 . C . PASS END=98354333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr2 98354334 . T . PASS END=98354360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr2 98354446 . C . PASS END=98354446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr2 98354447 . G . PASS END=98354447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 98354458 . A . PASS END=98354473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1025:0,87,255:32,0 chr2 98354474 . A . PASS END=98354510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:95:32:0,95,1227:0,95,255:39,0 chr2 98354511 . G A, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=3.958;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,21,0:0.538,0.000:39:11,13,0:7,8,0:48:85,0,49,751,644,1395:255,0,255:18,0:5.0000e+01,6.7822e-05,5.2494e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,6,15:10,8,10,11 chr2 98354512 . T . PASS END=98354548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:35:0,93,1371:0,105,255:40,0 chr2 98354549 . T . PASS END=98354562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1224:0,83,255:33,0 chr2 98354563 . A . PASS END=98354570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr2 98354677 . C . PASS END=98354687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 98354688 . G . PASS END=98354689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,956:0,73,255:26,0 chr2 98354690 . T . PASS END=98354692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 98354693 . T . PASS END=98354695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1068:0,74,255:26,0 chr2 98355831 . C . PASS END=98355831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 98355835 . C . PASS END=98355835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr2 98355838 . G . PASS END=98355899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:40:0,99,1462:0,99,255:40,0 chr2 98355900 . T . PASS END=98355900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1404:0,68,255:35,0 chr2 98355901 . G . PASS END=98355909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1440:0,84,255:36,0 chr2 98355910 . G . PASS END=98355910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1396:0,54,255:32,0 chr2 98355911 . G . PASS END=98355911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1357:0,65,255:31,0 chr2 98355912 . T . PASS END=98355914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:38:0,96,1440:0,101,255:34,0 chr2 98355915 . A . PASS END=98355915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr2 98355916 . A . PASS END=98355916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:33,0 chr2 98355917 . G . PASS END=98355917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr2 98355918 . G . PASS END=98355919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:31,1 chr2 98355920 . C . PASS END=98355921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1237:0,31,255:32,1 chr2 98355922 . C . PASS END=98355922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:31,0 chr2 98355923 . C . PASS END=98355923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 98355924 . C . PASS END=98355925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:31,0 chr2 98355926 . G . PASS END=98355926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:30,0 chr2 98355927 . G . PASS END=98355927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 98355928 . C . PASS END=98355928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:29,0 chr2 98355929 . A . PASS END=98355929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:29,0 chr2 98355930 . G . PASS END=98355938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,1125:0,60,255:29,0 chr2 98355939 . A . PASS END=98355944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:28:0,45,955:0,45,255:26,0 chr2 98355945 . A . PASS END=98355945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr2 98355946 . G . PASS END=98355949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr2 98355950 . G . PASS END=98355950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 98355951 . C . PASS END=98355952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr2 98355953 . T . PASS END=98355953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 98355954 . G . PASS END=98355961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,856:0,61,255:26,0 chr2 98355972 . C . PASS END=98355972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 98356009 . C . PASS END=98356009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 98356122 . G . PASS END=98356122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 98356189 . G . PASS END=98356189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 98356235 . G . PASS END=98356235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 98356289 . C . PASS END=98356289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr2 98357785 . G . PASS END=98357816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr2 98357817 . G T, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.700;ReadPosRankSum=2.237;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,9,0:0.692,0.000:13:1,5,0:3,4,0:46:85,0,46,314,143,457:255,0,116:4,0:5.0000e+01,1.0173e-04,4.8717e+01,3.1380e+02,1.7777e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,1,5,4:0,4,7,2 chr2 98357818 . C . PASS END=98357854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr2 98357855 . C . PASS END=98357872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 98373562 . T . PASS END=98373562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 98373563 . T . PASS END=98373563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 98373564 . A . PASS END=98373579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:19,0 chr2 98373580 . G . PASS END=98373583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 98373584 . G . PASS END=98373584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr2 98373585 . A . PASS END=98373585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 98373586 . A . PASS END=98373586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 98373587 . T . PASS END=98373589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 98373590 . G . PASS END=98373590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 98373591 . A . PASS END=98373592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 98373593 . C . PASS END=98373596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 98373597 . G . PASS END=98373600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr2 98373601 . C . PASS END=98373601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 98373602 . G . PASS END=98373606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:22,0 chr2 98373607 . T . PASS END=98373607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 98373608 . C . PASS END=98373608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 98373609 . T . PASS END=98373609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 98373610 . T . PASS END=98373625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 98373626 . C . PASS END=98373626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 98373627 . T . PASS END=98373643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,893:0,64,255:26,0 chr2 98373644 . T . PASS END=98373729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1172:0,83,255:39,0 chr2 98373730 . G . PASS END=98373730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 98373731 . C . PASS END=98373734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1202:0,83,255:33,0 chr2 98373735 . C . PASS END=98373735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr2 98373736 . C . PASS END=98373764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1241:0,86,255:33,0 chr2 98373765 . G . PASS END=98373765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr2 98373766 . G . PASS END=98373781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,87,255:33,0 chr2 98373782 . C . PASS END=98373820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr2 98373821 . A . PASS END=98373846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,535:0,45,255:19,0 chr2 98375356 . T . PASS END=98375356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 98375357 . G . PASS END=98375366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:26,0 chr2 98375367 . G . PASS END=98375382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr2 98375383 . A . PASS END=98375383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr2 98375384 . C . PASS END=98375476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1094:0,83,255:36,0 chr2 98375477 . T . PASS END=98375477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 98375478 . G . PASS END=98375488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 98375489 . C . PASS END=98375489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 98375490 . G . PASS END=98375492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 98375493 . A . PASS END=98375493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 98375494 . T . PASS END=98375503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:30,0 chr2 98375504 . T . PASS END=98375504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 98375505 . T . PASS END=98375505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 98375506 . G . PASS END=98375506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 98375507 . C . PASS END=98375507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 98375508 . T . PASS END=98375508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 98375509 . G . PASS END=98375509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 98375510 . A . PASS END=98375516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr2 98376115 . C . PASS END=98376212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:41:0,88,1448:0,88,255:40,1 chr2 98377056 . C . PASS END=98377152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1299:0,81,255:40,0 chr2 98377256 . C . PASS END=98377315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,958:0,82,255:34,0 chr2 98377316 . G . PASS END=98377316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 98377317 . G . PASS END=98377335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1134:0,82,255:33,0 chr2 98377336 . A . PASS END=98377336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 98377337 . A . PASS END=98377337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 98377338 . C . PASS END=98377338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 98377339 . T . PASS END=98377343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 98377344 . T . PASS END=98377344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:27,0 chr2 98377345 . T . PASS END=98377347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 98377348 . C . PASS END=98377354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,77,255:25,0 chr2 98377355 . T . PASS END=98377355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,858:0,53,255:21,0 chr2 98377356 . T . PASS END=98377358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:23,0 chr2 98377359 . C . PASS END=98377363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 98377364 . T . PASS END=98377365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 98377366 . A . PASS END=98377366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:24,0 chr2 98377367 . T . PASS END=98377367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 98377368 . T . PASS END=98377369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 98377370 . T . PASS END=98377370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 98377371 . A . PASS END=98377377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr2 98378498 . C . PASS END=98378502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:16,0 chr2 98378503 . G . PASS END=98378503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 98378504 . G . PASS END=98378504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 98378505 . A . PASS END=98378505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 98378506 . G . PASS END=98378506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 98378507 . C . PASS END=98378507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr2 98378508 . T . PASS END=98378511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,598:0,41,255:19,0 chr2 98378512 . G . PASS END=98378519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,693:0,63,255:21,0 chr2 98378520 . T . PASS END=98378521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 98378522 . C . PASS END=98378527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:23,0 chr2 98378528 . T . PASS END=98378528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,680:0,52,255:22,0 chr2 98378529 . A . PASS END=98378548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,894:0,72,255:26,0 chr2 98378549 . G . PASS END=98378558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1125:0,87,255:30,0 chr2 98378559 . C . PASS END=98378559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 98378560 . A . PASS END=98378560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 98378561 . G . PASS END=98378561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 98378562 . C . PASS END=98378568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 98378569 . A . PASS END=98378569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 98378570 . G . PASS END=98378570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 98378571 . A . PASS END=98378571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr2 98378572 . C . PASS END=98378608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:31:0,86,1097:0,86,255:34,0 chr2 98378609 . A . PASS END=98378610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 98378611 . G . PASS END=98378614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1030:0,93,255:31,0 chr2 98378615 . A . PASS END=98378615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 98378616 . T . PASS END=98378619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 98378620 . T . PASS END=98378639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,71,255:26,0 chr2 98378640 . A . PASS END=98378640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:21,0 chr2 98378641 . A . PASS END=98378651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 98378652 . G . PASS END=98378653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 98378654 . C . PASS END=98378654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:18,0 chr2 98378655 . T . PASS END=98378663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:21:0,54,810:0,56,255:19,0 chr2 98382577 . A . PASS END=98382703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:36:0,93,1335:0,101,255:40,0 chr2 98382704 . G . PASS END=98382704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1473:0,71,255:30,0 chr2 98382705 . T . PASS END=98382708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:38:0,87,1305:0,114,255:31,0 chr2 98382709 . C . PASS END=98382709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1189:0,56,255:27,0 chr2 98382710 . C . PASS END=98382716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1141:0,82,255:30,0 chr2 98382717 . T . PASS END=98382718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr2 98382719 . A . PASS END=98382726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:27,0 chr2 98382941 . C . PASS END=98383065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:39:0,99,1485:0,117,255:40,0 chr2 98388760 . C . PASS END=98388887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:68:0,120,1800:0,188,255:40,1 chr2 98392306 . C . PASS END=98392479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:39:0,102,1368:0,103,255:40,0 chr2 98392480 . C . PASS END=98392481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1366:0,100,255:34,0 chr2 98408849 . C . PASS END=98408945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1181:0,85,255:40,0 chr2 98408946 . A . PASS END=98408951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,86,255:26,0 chr2 98408952 . G . PASS END=98408957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 98408958 . C . PASS END=98408980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:23,0 chr2 98408981 . C . PASS END=98409004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 98409005 . A . PASS END=98409007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr2 98409008 . G . PASS END=98409008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr2 98409009 . G . PASS END=98409033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr2 98409034 . C . PASS END=98409039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 98409040 . G . PASS END=98409041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 98409042 . C . PASS END=98409045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 98409046 . G A, 49.90 PASS DP=21;MQ=250.00;MQRankSum=3.838;ReadPosRankSum=0.951;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,10,0:0.476,0.000:21:4,4,0:7,6,0:48:85,0,50,358,393,751:255,0,255:10,0:4.9897e+01,6.6269e-05,5.3000e+01,3.5770e+02,4.2824e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,5,5:6,5,3,7 chr2 98409047 . G . PASS END=98409081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,853:0,62,255:26,0 chr2 98409082 . G . PASS END=98409083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 98409084 . C . PASS END=98409104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 98409105 . G . PASS END=98409105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 98409106 . C . PASS END=98409113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1124:0,87,255:29,0 chr2 98409114 . A . PASS END=98409149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 98409150 . T . PASS END=98409150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,864:0,42,255:22,0 chr2 98409151 . T . PASS END=98409185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,837:0,69,255:25,0 chr2 98409186 . T . PASS END=98409186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 98409187 . G . PASS END=98409211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr2 98409212 . T . PASS END=98409212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 98409213 . T . PASS END=98409219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 98409220 . T . PASS END=98409240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,675:0,44,255:19,0 chr2 98409241 . G . PASS END=98409244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 98409245 . G . PASS END=98409247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 98409248 . C . PASS END=98409275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,854:0,66,255:26,0 chr2 98409276 . G . PASS END=98409344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr2 98409345 . T . PASS END=98409345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 98409346 . G . PASS END=98409406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1180:0,83,255:33,0 chr2 98409407 . A . PASS END=98409431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:25,0 chr2 98409432 . G . PASS END=98409432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:20,0 chr2 98409433 . C . PASS END=98409438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 98409439 . G . PASS END=98409443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr2 98409444 . C . PASS END=98409447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 98409858 . T . PASS END=98409858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 98409859 . T . PASS END=98409875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 98409876 . C . LowGQ END=98409876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,365:22,0,255:11,0 chr2 98409877 . C . PASS END=98409881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr2 98409882 . A . PASS END=98409921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:19,0 chr2 98409922 . G . PASS END=98409939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,807:0,66,255:25,0 chr2 98409940 . A . PASS END=98409940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 98409941 . T . PASS END=98409955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,902:0,75,255:25,0 chr2 98409956 . T . PASS END=98409957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 98409958 . G . PASS END=98409959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,945:0,62,255:21,0 chr2 98409960 . T . PASS END=98409960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 98409961 . C . PASS END=98409963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 98409964 . A . PASS END=98409965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:21,0 chr2 98409966 . A . PASS END=98409969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 98409970 . C . PASS END=98409970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 98409971 . T . PASS END=98409980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr2 98409981 . A . PASS END=98409981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 98409982 . A . PASS END=98409983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 98409984 . T . PASS END=98410008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr2 98410009 . A . PASS END=98410009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr2 98410010 . C . PASS END=98410010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 98410011 . A . PASS END=98410011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 98410012 . G . PASS END=98410014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 98410015 . C . PASS END=98410016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 98411393 . C . PASS END=98411400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:25,0 chr2 98411401 . T . PASS END=98411401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:24,0 chr2 98411402 . C . PASS END=98411407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:26,0 chr2 98411408 . A . PASS END=98411408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,934:0,56,255:27,0 chr2 98411409 . T . PASS END=98411573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:29:0,84,1260:0,87,255:40,0 chr2 98411574 . T . PASS END=98411578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:33:0,72,1080:0,99,255:26,0 chr2 98412681 . A . PASS END=98412867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:56:0,120,1800:0,152,255:40,0 chr2 98413307 . T . PASS END=98413427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:36:0,84,1260:0,101,255:40,0 chr2 98413428 . A . PASS END=98413437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,77,255:26,0 chr2 98413438 . G . PASS END=98413449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:24:0,48,720:0,72,255:17,0 chr2 98413828 . C . PASS END=98413979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:49:0,108,1620:0,131,255:40,0 chr2 98418358 . A . PASS END=98418424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:94:0,120,1800:0,255,255:40,0 chr2 98418891 . C . PASS END=98419000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:75:0,120,1800:0,209,255:40,0 chr2 98419115 . T . PASS END=98419253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:36:0,90,1350:0,91,255:40,2 chr2 98421551 . C . PASS END=98421668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:49:0,120,1800:0,137,255:40,0 chr2 98421839 . A . PASS END=98421914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,140,255:40,0 chr2 98422014 . C . PASS END=98422166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,120,1800:0,140,255:40,0 chr2 98426151 . T . PASS END=98426151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 98426152 . G . PASS END=98426237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:31:0,83,1157:0,83,255:39,0 chr2 98427591 . C . PASS END=98427695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:55:0,120,1800:0,148,255:40,1 chr2 98428884 . C . PASS END=98429018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:53:0,120,1800:0,142,255:40,0 chr2 98429102 . C . PASS END=98429212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,119,1800:0,119,255:40,0 chr2 98430434 . A . PASS END=98430604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:50:0,117,1755:0,134,255:40,0 chr2 98430698 . T . PASS END=98430851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:41:0,110,1458:0,110,255:40,0 chr2 98431662 . C . PASS END=98431770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,165,255:40,0 chr2 98435076 . C . PASS END=98435184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:58:0,120,1800:0,174,255:40,0 chr2 98449828 . T . PASS END=98449833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:90:0,120,1800:0,240,255:40,0 chr2 98449834 . T . PASS END=98449889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:95:0,120,1800:0,219,255:40,0 chr2 98451084 . C . PASS END=98451140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:74:0,120,1800:0,165,255:40,0 chr2 98451238 . C . PASS END=98451388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,120,1800:0,128,255:40,0 chr2 98453540 . C . PASS END=98453620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,106,1429:0,106,255:40,0 chr2 98458278 . C . PASS END=98458278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1119:0,96,255:32,0 chr2 98458279 . T . PASS END=98458279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1037:0,63,255:30,0 chr2 98458280 . G . PASS END=98458285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1174:0,88,255:32,0 chr2 98458286 . G . PASS END=98458286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1166:0,78,255:32,0 chr2 98458287 . C . PASS END=98458291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1288:0,94,255:38,0 chr2 98458292 . T . PASS END=98458292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1349:0,73,255:37,0 chr2 98458293 . G . PASS END=98458400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:40:0,80,1360:0,80,255:40,0 chr2 98460608 . C . PASS END=98460724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:47:0,120,1800:0,128,255:40,0 chr2 98475767 . C . PASS END=98475890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,158,255:40,0 chr2 98504515 . T . PASS END=98504583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,105,1575:0,160,255:40,0 chr2 98525121 . C . PASS END=98525144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:81:0,120,1800:0,230,255:40,0 chr2 98525145 . C . PASS END=98525161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:89:0,120,1800:0,215,255:40,0 chr2 98528084 . A . PASS END=98528134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:65:0,120,1800:0,179,255:40,0 chr2 98543889 . C . PASS END=98543950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:48:0,117,1784:0,117,255:40,0 chr2 98611939 . C . PASS END=98611946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 98611947 . T . PASS END=98611947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 98611948 . C . PASS END=98611956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 98611957 . C . PASS END=98611961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 98611962 . G . PASS END=98611972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 98611973 . G . PASS END=98611973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 98611974 . G . PASS END=98611987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:16,0 chr2 98611988 . C . PASS END=98611993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 98611994 . G T, 50.00 PASS DP=16;MQ=250.00;MQRankSum=3.200;ReadPosRankSum=0.597;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,10,0:0.625,0.000:16:3,6,0:3,4,0:47:85,0,48,357,215,572:255,0,184:6,0:5.0000e+01,7.9471e-05,5.0803e+01,3.5718e+02,2.4931e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,3,4,6:4,2,2,8 chr2 98611995 . C . PASS END=98612005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:12,0 chr2 98612006 . G . PASS END=98612006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 98612007 . G . PASS END=98612026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 98612027 . C . PASS END=98612034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr2 98612035 . G . PASS END=98612035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:8,0 chr2 98612036 . G . PASS END=98612044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:20:9:0,20,319:0,20,255:9,0 chr2 98612045 . A . PASS END=98612045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr2 98612046 . G . PASS END=98612047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 98612048 . T . PASS END=98612048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr2 98612049 . T . PASS END=98612055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 98612056 . C T, 0.01 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=-0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:3,1,0:4,0,0:28:7,0,50,28,250,278:7,0,239:7,0:6.8709e-03,2.8018e+01,8.1018e+01,5.5845e+01,3.1265e+02,3.0871e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,0,1:4,3,0,1 chr2 98612057 . G . PASS END=98612057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 98612058 . G . PASS END=98612062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 98612063 . G . PASS END=98612063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 98612064 . G . PASS END=98612076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 98612077 . C T, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:3,1,0:4,0,0:20:15,0,50,36,250,286:15,0,247:6,0:4.2297e-02,2.0137e+01,7.3137e+01,5.5880e+01,3.0494e+02,3.0891e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,1,0:4,3,1,0 chr2 98612078 . G . PASS END=98612078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr2 98612079 . G . PASS END=98612087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 98612088 . G . PASS END=98612088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 98612089 . T . PASS END=98612095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 98612096 . G . PASS END=98612099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:5,0 chr2 98612100 . G . PASS END=98612111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:4:0,9,135:0,12,111:3,0 chr2 98612112 . G . PASS END=98612125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,78:2,0 chr2 98709556 . A . PASS END=98709556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,674:0,46,255:20,0 chr2 98709557 . T . PASS END=98709564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:24,0 chr2 98709565 . T . PASS END=98709565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 98709566 . C . PASS END=98709572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 98709573 . A . PASS END=98709573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr2 98709574 . T . PASS END=98709574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,884:0,34,255:25,0 chr2 98709575 . C . PASS END=98709576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98709577 . T . PASS END=98709577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 98709578 . C . PASS END=98709579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98709580 . A . PASS END=98709580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:26,0 chr2 98709581 . C . PASS END=98709583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 98709584 . T . PASS END=98709584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 98709585 . C . PASS END=98709585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 98709586 . T . PASS END=98709587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 98709588 . T . PASS END=98709589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 98709590 . A . PASS END=98709590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 98709591 . G . PASS END=98709592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr2 98709593 . A . PASS END=98709593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr2 98709594 . G . PASS END=98709621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1177:0,80,255:35,0 chr2 98709622 . A . PASS END=98709622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr2 98709623 . A . PASS END=98709646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1140:0,85,255:39,0 chr2 98709647 . A . PASS END=98709683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,113,1558:0,113,255:40,0 chr2 98709684 . T C, 49.49 PASS DP=50;MQ=249.88;MQRankSum=5.509;ReadPosRankSum=2.764;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,23,0:0.460,0.000:50:14,14,0:13,9,0:48:84,0,50,823,929,1752:255,0,255:25,0:4.9492e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,15,12,11:11,16,17,6 chr2 98709685 . G . PASS END=98709721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,118,1592:0,118,255:40,0 chr2 98709722 . T . PASS END=98709749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:39:0,93,1395:0,101,255:40,0 chr2 98709750 . A . PASS END=98709751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,117,255:25,0 chr2 98732115 . A . PASS END=98732209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,114,1710:0,131,255:40,0 chr2 98735976 . C . PASS END=98735985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,734:0,72,255:24,0 chr2 98735986 . A . PASS END=98735995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 98735996 . G . PASS END=98735997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 98735998 . T . PASS END=98736002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98736003 . C . PASS END=98736003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 98736004 . A . PASS END=98736013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1054:0,84,255:29,0 chr2 98736014 . A . PASS END=98736014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:26,0 chr2 98736015 . C . PASS END=98736021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 98736022 . C . PASS END=98736022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 98736023 . A . PASS END=98736213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1191:0,83,255:40,0 chr2 98736214 . T . PASS END=98736226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:24:0,66,990:0,72,255:24,0 chr2 98737762 . G . PASS END=98737921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:96:41:0,96,1439:0,107,255:40,0 chr2 98744702 . A . PASS END=98744711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr2 98744712 . T . PASS END=98744712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,907:0,67,255:27,0 chr2 98744713 . T . PASS END=98744716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 98744717 . T . PASS END=98744717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 98744718 . A . PASS END=98744719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 98744720 . T . PASS END=98744720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr2 98744721 . T . PASS END=98744757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1125:0,83,255:34,0 chr2 98744758 . T . PASS END=98744758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1148:0,74,255:33,0 chr2 98744759 . C . PASS END=98744779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1294:0,89,255:34,0 chr2 98744780 . A . PASS END=98744780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:28,0 chr2 98744781 . T . PASS END=98744787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1169:0,80,255:30,0 chr2 98744788 . T . PASS END=98744822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr2 98744823 . A . PASS END=98744852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:19,0 chr2 98744853 . G . PASS END=98744860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:18:0,30,450:0,54,255:12,0 chr2 98744861 . A . PASS END=98744868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 98744869 . C . PASS END=98744871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 98750287 . A . PASS END=98750402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:50:0,114,1744:0,114,255:40,0 chr2 98779314 . G . PASS END=98779314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 98779315 . A . PASS END=98779315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 98779316 . G . PASS END=98779320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 98779321 . A . PASS END=98779321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 98779322 . G . PASS END=98779325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 98779326 . G . PASS END=98779326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 98779327 . A . PASS END=98779351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,584:0,48,255:18,0 chr2 98779352 . G . PASS END=98779352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 98779353 . A . PASS END=98779353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,601:0,43,255:19,0 chr2 98779354 . G . PASS END=98779354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 98779355 . A . PASS END=98779355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,646:0,32,255:20,0 chr2 98779356 . T . PASS END=98779387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:24,0 chr2 98779388 . C . PASS END=98779388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 98779389 . A . PASS END=98779390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 98779391 . A . PASS END=98779391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 98779392 . G . PASS END=98779402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 98779403 . G . PASS END=98779439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 98795707 . G . PASS END=98795754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:41:0,93,1435:0,93,255:40,0 chr2 98795755 . G . PASS END=98795775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:33:0,87,1305:0,92,255:36,0 chr2 98795776 . C . PASS END=98795779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,83,255:26,0 chr2 98795780 . G . PASS END=98795780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 98797479 . A . PASS END=98797483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,986:0,78,255:26,0 chr2 98797484 . G . PASS END=98797572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:29:0,83,1091:0,83,255:39,0 chr2 98797573 . G . PASS END=98797573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:30,0 chr2 98797574 . C . PASS END=98797601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:34:0,91,1258:0,91,255:36,0 chr2 98797602 . G . PASS END=98797602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr2 98797603 . C . PASS END=98797627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1149:0,82,255:34,0 chr2 98797628 . G . PASS END=98797657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,909:0,65,255:26,0 chr2 98797658 . T . PASS END=98797667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,75,255:19,0 chr2 98797668 . C . PASS END=98797669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 98797670 . A . PASS END=98797675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:17,0 chr2 98804438 . G . PASS END=98804566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,978:0,81,255:37,0 chr2 98804567 . A . PASS END=98804590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:27:0,60,900:0,81,255:26,0 chr2 98804591 . A . PASS END=98804591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:20,0 chr2 98804592 . G . PASS END=98804592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 98809361 . G . PASS END=98809499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:56:0,120,1800:0,137,255:40,0 chr2 98810824 . G . PASS END=98810955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,105,1618:0,105,255:40,0 chr2 98828393 . A . PASS END=98828491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:51:0,120,1800:0,153,255:40,0 chr2 98831184 . G . PASS END=98831318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,105,1575:0,123,255:40,0 chr2 98833218 . G . PASS END=98833256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:36:0,89,1261:0,89,255:40,0 chr2 98833427 . A . PASS END=98833431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:42:38:0,42,630:0,97,255:14,0 chr2 98833432 . T . PASS END=98833435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:33:36:0,33,495:0,35,255:13,0 chr2 98833436 . A . PASS END=98833436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:24:36:0,24,360:0,52,255:7,0 chr2 98833437 . T . PASS END=98833438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:18:36:0,18,270:0,60,255:5,0 chr2 98834309 . C . PASS END=98834313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1027:0,87,255:31,0 chr2 98834314 . T . PASS END=98834314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 98834315 . G . PASS END=98834491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:93:31:0,93,1127:0,93,255:40,0 chr2 98844665 . A . PASS END=98844673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1565:0,119,255:40,0 chr2 98844674 . C G, 191.45 PASS DP=48;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,48,0:1.000,0.000:48:0,25,0:0,23,0:141:229,144,0,329,329,329:255,144,0:0,0:1.9145e+02,1.4145e+02,0.0000e+00,3.2622e+02,3.6099e+02,3.2923e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,29,19:0,0,22,26 chr2 98844675 . T . PASS END=98844711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,143,255:40,0 chr2 98844712 . T . PASS END=98844795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,105,1575:0,116,255:40,0 chr2 98846513 . G . PASS END=98846665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:40:0,93,1413:0,93,255:40,0 chr2 98846666 . C . PASS END=98846670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:36:0,75,1125:0,87,255:25,0 chr2 98851111 . A . PASS END=98851121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 98851122 . A . PASS END=98851122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 98851123 . C . PASS END=98851123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 98851124 . C . PASS END=98851188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,994:0,81,255:35,0 chr2 98851189 . T . PASS END=98851192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 98851193 . C . PASS END=98851199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 98851200 . A . PASS END=98851226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr2 98851227 . A . PASS END=98851227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 98851228 . A . PASS END=98851230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 98852853 . A . PASS END=98852940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,119,1629:0,119,255:40,0 chr2 98853037 . T . PASS END=98853135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:31:0,83,1180:0,83,255:40,0 chr2 98853136 . C . PASS END=98853161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1066:0,82,255:35,0 chr2 98853162 . A . PASS END=98853170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr2 98853171 . T . PASS END=98853171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:21,0 chr2 98853172 . C . PASS END=98853172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr2 98853173 . G A, 136.82 PASS DP=30;MQ=250.00;FractionInformativeReads=0.967 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,11,0:0,18,0:87:175,90,0,275,275,275:255,90,0:0,0:1.3682e+02,8.6816e+01,0.0000e+00,2.7159e+02,3.0636e+02,2.7460e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,8,21:0,0,14,15 chr2 98853174 . T . PASS END=98853174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:22,0 chr2 98853175 . G . PASS END=98853192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 98853193 . G . PASS END=98853193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 98856869 . G . PASS END=98856880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,149,255:40,0 chr2 98856881 . G A, 214.16 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,19,0:0,37,0:164:252,167,0,2084,167,2084:255,168,0:0,0:2.1416e+02,1.6416e+02,0.0000e+00,4.5000e+02,1.9893e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,20:0,0,23,33 chr2 98856882 . T . PASS END=98856904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,151,255:40,0 chr2 98858720 . T . PASS END=98858725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 98858726 . C . PASS END=98858726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:19,0 chr2 98858727 . C . PASS END=98858732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 98858733 . A . PASS END=98858733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 98858734 . G . PASS END=98858735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 98858736 . C . PASS END=98858736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 98858737 . T . PASS END=98858741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 98858742 . T . LowGQ END=98858742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:0:26:0,0,723:8,0,255:23,0 chr2 98858743 . C . PASS END=98858743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:24,0 chr2 98858744 . G . PASS END=98858756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,817:0,61,255:26,0 chr2 98858757 . A . PASS END=98858757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:21,0 chr2 98858758 . T . PASS END=98858759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 98858760 . A . PASS END=98858760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,698:0,25,255:17,0 chr2 98858761 . G . PASS END=98858761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 98862024 . A . PASS END=98862059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:104:0,120,1800:0,255,255:40,0 chr2 98862060 . G . PASS END=98862062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:103:0,120,1800:0,255,255:40,0 chr2 98866781 . G . PASS END=98866899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:90:0,120,1800:0,222,255:40,1 chr2 98872587 . G . PASS END=98872637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,1:128:99:115:0,120,1800:0,255,255:40,0 chr2 98885805 . G . PASS END=98885814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:71:0,120,1800:0,189,255:40,0 chr2 98887145 . G . PASS END=98887346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:31:0,83,1156:0,83,255:40,0 chr2 98906974 . C . PASS END=98907039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,162,255:40,0 chr2 98907040 . C . PASS END=98907053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,135,255:40,0 chr2 98907054 . A . PASS END=98907054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:74:56:0,74,1937:0,74,255:40,0 chr2 98907055 . A . PASS END=98907071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:87:50:0,87,1620:0,87,255:40,0 chr2 98907072 . C . PASS END=98907072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:45:50:0,45,1555:0,45,255:30,0 chr2 98907073 . T . PASS END=98907081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:92:47:0,92,1485:0,92,255:34,0 chr2 98907082 . C . PASS END=98907082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:36:47:0,36,1380:0,36,255:29,0 chr2 98907083 . C . PASS END=98907083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,99,1485:0,107,255:32,0 chr2 98907084 . A . PASS END=98907084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1460:0,66,255:29,0 chr2 98907085 . G . PASS END=98907085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:96:45:0,96,1440:0,101,255:30,0 chr2 98914370 . G . PASS END=98914442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:32:0,93,1219:0,96,255:40,0 chr2 98914443 . C . PASS END=98914443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1163:0,55,255:30,0 chr2 98914444 . A . PASS END=98914444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1172:0,83,255:31,0 chr2 98914445 . C . PASS END=98914445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,994:0,49,255:29,0 chr2 98914446 . C . PASS END=98914458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:33,0 chr2 98914459 . C . PASS END=98914459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 98914460 . C . PASS END=98914464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 98914465 . G . PASS END=98914487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 98914488 . G . PASS END=98914488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 98914489 . C . PASS END=98914494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 98916542 . G . PASS END=98916679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:39:0,102,1457:0,102,255:40,0 chr2 98920165 . G . PASS END=98920265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:70:0,120,1800:0,194,255:40,0 chr2 98928282 . A . PASS END=98928443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:34:0,99,1321:0,102,255:40,0 chr2 98928444 . C . PASS END=98928444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1404:0,73,255:33,0 chr2 98928445 . C . PASS END=98928456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,95,255:34,0 chr2 98928457 . T . PASS END=98928493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1263:0,89,255:34,0 chr2 98928494 . G A, 150.50 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,20,0:0,15,0:100:188,104,0,1207,104,1207:255,105,0:0,0:1.5050e+02,1.0050e+02,0.0000e+00,4.5000e+02,1.3527e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,16:0,0,20,15 chr2 98928495 . G . PASS END=98928531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1271:0,99,255:34,0 chr2 98928532 . C . PASS END=98928544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1250:0,102,255:34,0 chr2 98928545 . T . PASS END=98928545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:33,0 chr2 98928546 . G . PASS END=98928793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:32:0,80,1141:0,80,255:40,0 chr2 98928794 . C . PASS END=98928794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 98928795 . G . PASS END=98928803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 98928804 . A . PASS END=98928812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,992:0,70,255:25,0 chr2 98962647 . C . PASS END=98962647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 98962652 . A . PASS END=98962652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 98962654 . A . PASS END=98962654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 98962709 . G . PASS END=98962709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1363:0,95,255:33,0 chr2 98962748 . C . PASS END=98962748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 98962764 . G . PASS END=98962764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1035:0,83,255:23,0 chr2 98962970 . G . PASS END=98962970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 98962992 . G . PASS END=98962992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 98986439 . A . PASS END=98986540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:39:0,89,1208:0,89,255:40,0 chr2 98994150 . A . PASS END=98994263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:97:36:0,97,1343:0,97,255:40,0 chr2 98994269 . T . PASS END=98994269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 98994521 . G . PASS END=98994684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:35:0,84,1260:0,84,255:40,1 chr2 98994685 . G . PASS END=98994685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 98996638 . G . PASS END=98996639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr2 98996640 . T . PASS END=98996640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 98996641 . G . PASS END=98996646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 98996647 . C . PASS END=98996647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:21,0 chr2 98996648 . C . PASS END=98996670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,908:0,66,255:26,0 chr2 98996671 . G . PASS END=98996671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:25,0 chr2 98996672 . G . PASS END=98996672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 98996673 . C . PASS END=98996676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr2 98996677 . C . PASS END=98996677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 98996678 . A . PASS END=98996787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1028:0,82,255:40,0 chr2 98996788 . C . PASS END=98996797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr2 98996798 . C . PASS END=98996798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:22,0 chr2 98996799 . C . PASS END=98996815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,64,255:24,0 chr2 98996816 . A . PASS END=98996817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 98996826 . C . PASS END=98996826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 98999846 . C . PASS END=98999846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 98999851 . C . PASS END=98999904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,105,1665:0,105,255:40,0 chr2 98999917 . A . PASS END=98999917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 99006121 . G . PASS END=99006122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 99006123 . A . PASS END=99006123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 99006124 . G . PASS END=99006124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr2 99006125 . A . PASS END=99006125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr2 99006126 . A . PASS END=99006128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr2 99006129 . C . PASS END=99006129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 99006130 . G . PASS END=99006133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr2 99006134 . A . PASS END=99006134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 99006135 . A . PASS END=99006136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1101:0,90,255:30,0 chr2 99006137 . A . PASS END=99006137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:29,0 chr2 99006138 . A . PASS END=99006183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:30:0,83,1087:0,83,255:35,0 chr2 99006184 . G . PASS END=99006184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr2 99006185 . C . PASS END=99006205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:33,0 chr2 99006206 . G . PASS END=99006215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,77,255:26,0 chr2 99006216 . A . PASS END=99006218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr2 99006219 . G . PASS END=99006237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr2 99006243 . C . PASS END=99006243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 99006251 . G . PASS END=99006251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 99008327 . G . PASS END=99008433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:88:35:0,88,1211:0,88,255:40,0 chr2 99012307 . G . PASS END=99012307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 99012308 . T . PASS END=99012310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 99012311 . T . PASS END=99012311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,764:0,55,255:23,0 chr2 99012312 . C . PASS END=99012312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 99012313 . T . PASS END=99012313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 99012314 . C . PASS END=99012317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr2 99012318 . C . PASS END=99012318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr2 99012319 . A . PASS END=99012321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 99012322 . G . PASS END=99012323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 99012324 . T . PASS END=99012324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr2 99012325 . T . PASS END=99012340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,1008:0,80,255:33,0 chr2 99012341 . C . PASS END=99012341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:33,0 chr2 99012342 . A . PASS END=99012519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1188:0,87,255:40,0 chr2 99012520 . A . PASS END=99012520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1330:0,78,255:33,0 chr2 99012521 . C . PASS END=99012760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:39:0,90,1310:0,93,255:40,0 chr2 99012761 . G . PASS END=99012761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:57:47:0,57,1285:0,57,255:40,0 chr2 99012762 . G . PASS END=99012770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:80:49:0,80,1335:0,80,255:40,0 chr2 99012771 . T . PASS END=99012771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,8:52:22:52:0,22,1184:0,22,255:40,0 chr2 99012772 . T . PASS END=99012922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:80:30:0,80,1169:0,80,255:40,0 chr2 99012923 . C . PASS END=99012923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr2 99012924 . A . PASS END=99012930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,99,1485:0,102,255:37,0 chr2 99012931 . T . PASS END=99012931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:35,0 chr2 99012932 . G . PASS END=99013088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:37:0,80,1112:0,80,255:40,0 chr2 99013089 . T . PASS END=99013092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 99013093 . A . PASS END=99013095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:27,0 chr2 99013096 . C . PASS END=99013113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,1002:0,70,255:26,0 chr2 99013114 . T . PASS END=99013123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 99013124 . G . PASS END=99013124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 99013125 . C . PASS END=99013130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 99013131 . C . PASS END=99013167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,862:0,61,255:28,0 chr2 99013168 . A . PASS END=99013178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 99013179 . G . PASS END=99013179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 99013180 . G . PASS END=99013182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:28,0 chr2 99013183 . A . PASS END=99013200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,909:0,67,255:26,0 chr2 99013201 . A . PASS END=99013201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:23,0 chr2 99013202 . C . PASS END=99013203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 99013204 . A . PASS END=99013204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 99013205 . G . PASS END=99013221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,862:0,72,255:26,0 chr2 99013222 . T . PASS END=99013222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,859:0,23,255:21,0 chr2 99013223 . G . PASS END=99013223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr2 99013224 . G . PASS END=99013230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 99013231 . A . PASS END=99013231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr2 99013232 . T . PASS END=99013239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 99013240 . C . PASS END=99013241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 99013242 . C . PASS END=99013244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 99013245 . T . PASS END=99013245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:24:24:0,24,551:0,24,255:20,0 chr2 99013246 . T . PASS END=99013246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 99013247 . C . PASS END=99013261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:22,0 chr2 99013262 . T . PASS END=99013262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 99013263 . G . PASS END=99013263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 99013264 . G . PASS END=99013264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,665:0,8,255:18,0 chr2 99013265 . C . PASS END=99013277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr2 99013278 . G . PASS END=99013325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,605:0,40,255:19,0 chr2 99013326 . A . PASS END=99013326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:12,0 chr2 99013327 . C . PASS END=99013337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 99013338 . C . PASS END=99013338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 99013339 . G . PASS END=99013340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 99013341 . A . PASS END=99013341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 99013342 . G . PASS END=99013345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:19,0 chr2 99013346 . T . PASS END=99013347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 99013348 . G . PASS END=99013370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,714:0,54,255:19,0 chr2 99013371 . T . PASS END=99013372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 99013373 . A . PASS END=99013373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr2 99013374 . A . PASS END=99013374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:20,0 chr2 99013375 . A . PASS END=99013375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 99013376 . G . PASS END=99013381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 99013382 . T . PASS END=99013391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:19,0 chr2 99013392 . G . PASS END=99013392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 99013393 . C . PASS END=99013394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 99013395 . C . PASS END=99013395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 99013396 . T . PASS END=99013396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 99013397 . C . PASS END=99013415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 99013416 . A . PASS END=99013416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 99013417 . A . PASS END=99013470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,876:0,66,255:24,0 chr2 99013471 . A . PASS END=99013471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 99013472 . T . PASS END=99013484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 99013485 . A . PASS END=99013485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 99013486 . G . PASS END=99013494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:22,0 chr2 99013495 . C . PASS END=99013495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 99013496 . G . PASS END=99013505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 99013506 . G . PASS END=99013506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 99013507 . A . PASS END=99013519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 99013520 . A . PASS END=99013520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:18,0 chr2 99013521 . G . PASS END=99013560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:20:0,60,731:0,60,255:25,0 chr2 99013561 . G . PASS END=99013586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,930:0,84,255:30,0 chr2 99013587 . A . PASS END=99013587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 99013588 . A . PASS END=99013609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:32:0,93,1233:0,96,255:35,0 chr2 99013610 . G . PASS END=99013610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1131:0,58,255:32,0 chr2 99013611 . C . PASS END=99013612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1288:0,105,255:36,0 chr2 99013613 . G . PASS END=99013613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1075:0,74,255:34,0 chr2 99013614 . C . PASS END=99013621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1141:0,110,255:37,0 chr2 99013622 . C . PASS END=99013622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:34,0 chr2 99013623 . C . PASS END=99013718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:35:0,87,1333:0,87,255:40,0 chr2 99013778 . G . PASS END=99013778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 99013884 . G . PASS END=99013884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 99013896 . C . PASS END=99013896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 99013987 . A . PASS END=99013987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1297:0,108,255:36,0 chr2 99014001 . G . PASS END=99014001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 99014034 . A . PASS END=99014034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1389:0,114,255:38,0 chr2 99014136 . T . PASS END=99014136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 99014187 . A . PASS END=99014188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 99014234 . T . PASS END=99014234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 99014469 . T . PASS END=99014469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 99014483 . G . PASS END=99014483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 99014612 . C . PASS END=99014612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 99014622 . C . PASS END=99014622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 99014768 . A . PASS END=99014768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 99014803 . G . PASS END=99014803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr2 99014921 . C . PASS END=99014921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 99014958 . C . PASS END=99014958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr2 99015048 . A . PASS END=99015048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 99136512 . A . PASS END=99136522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 99136523 . A . PASS END=99136538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 99136539 . C . PASS END=99136539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 99136540 . A . PASS END=99136559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1039:0,84,255:29,0 chr2 99136560 . A G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.551;ReadPosRankSum=3.535;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,18,0:0.600,0.000:30:6,6,0:6,12,0:47:85,0,47,644,413,1057:255,0,255:12,0:5.0000e+01,8.3354e-05,5.0374e+01,4.5000e+02,4.4853e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,8,10:5,7,10,8 chr2 99136561 . T . PASS END=99136570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1080:0,90,255:30,0 chr2 99136571 . T . PASS END=99136571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 99136572 . T . PASS END=99136579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 99136580 . C . PASS END=99136590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 99136591 . C . PASS END=99136597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 99136598 . G . PASS END=99136603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 99136604 . C . PASS END=99136617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr2 99137150 . G . PASS END=99137194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:100:0,120,1800:0,255,255:40,0 chr2 99149840 . C . PASS END=99149842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 99149843 . G . PASS END=99149843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 99149844 . C . PASS END=99149844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 99149845 . A . PASS END=99149858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:37,0 chr2 99149859 . T . PASS END=99149859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr2 99149860 . C . PASS END=99149930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:33:0,85,1180:0,85,255:38,0 chr2 99149931 . G . PASS END=99149931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:30,0 chr2 99149932 . A . PASS END=99149940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1169:0,80,255:31,0 chr2 99149941 . C . PASS END=99149944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 99149945 . C . PASS END=99149945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 99149946 . G . PASS END=99149952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:28:0,70,934:0,70,255:26,0 chr2 99149953 . A . PASS END=99149953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:24,0 chr2 99149954 . T . PASS END=99149958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,939:0,67,255:25,0 chr2 99152192 . G . PASS END=99152308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:42:0,120,1800:0,121,255:40,0 chr2 99152592 . A . PASS END=99152671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:47:0,102,1615:0,102,255:40,0 chr2 99154326 . G . PASS END=99154418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:37:0,90,1350:0,98,255:40,0 chr2 99154419 . G . PASS END=99154419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:29,0 chr2 99154420 . G . PASS END=99154437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr2 99155354 . A . PASS END=99155444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,111,1532:0,111,255:40,0 chr2 99155991 . T . PASS END=99156010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 99156011 . C . LowGQ END=99156011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,612:17,0,255:17,0 chr2 99156012 . G . PASS END=99156012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:17,0 chr2 99156013 . C . PASS END=99156013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 99156014 . A . PASS END=99156014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 99156015 . T . PASS END=99156015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:22,0 chr2 99156016 . G . PASS END=99156016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 99156017 . T . PASS END=99156018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr2 99156019 . C . PASS END=99156021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 99156022 . G . PASS END=99156022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr2 99156023 . T . PASS END=99156032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,869:0,42,255:26,0 chr2 99156033 . C . PASS END=99156033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 99156034 . T . PASS END=99156037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:26,0 chr2 99156038 . G . PASS END=99156038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 99156039 . G . PASS END=99156049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,826:0,42,255:26,0 chr2 99156050 . C . PASS END=99156052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr2 99156053 . A . PASS END=99156054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:42:27:0,42,953:0,42,255:26,0 chr2 99156055 . C . PASS END=99156055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 99156056 . C . PASS END=99156056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 99156057 . T . PASS END=99156062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 99156063 . A . PASS END=99156063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr2 99156064 . G . PASS END=99156114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:26,0 chr2 99156115 . C . PASS END=99156116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 99156117 . T . PASS END=99156123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr2 99156124 . G . PASS END=99156124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 99156125 . G . PASS END=99156127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 99156128 . G . PASS END=99156130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr2 99156131 . G . PASS END=99156134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 99156135 . C . PASS END=99156135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:21,0 chr2 99156136 . C . PASS END=99156137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 99156138 . G . PASS END=99156138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 99160340 . A . PASS END=99160461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:38:0,87,1305:0,88,255:40,0 chr2 99160462 . A . PASS END=99160462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:29,0 chr2 99160463 . G . PASS END=99160470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:66:33:0,66,990:0,95,255:24,0 chr2 99162432 . G . PASS END=99162531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:42:0,84,1260:0,84,255:40,0 chr2 99162532 . A . PASS END=99162532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1449:0,79,255:28,0 chr2 99162533 . T . PASS END=99162536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:81:40:0,81,1215:0,87,255:28,0 chr2 99163049 . A . PASS END=99163157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:35:0,87,1305:0,105,255:40,0 chr2 99165415 . C . PASS END=99165432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:70:0,120,1800:0,161,255:40,0 chr2 99166870 . A . PASS END=99166982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,102,1530:0,132,255:40,0 chr2 99169249 . T . PASS END=99169279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:34,0 chr2 99169280 . A . PASS END=99169280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr2 99169281 . T . PASS END=99169366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:35:0,90,1333:0,90,255:40,0 chr2 99169367 . T . PASS END=99169367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:36,0 chr2 99169368 . C . PASS END=99169369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1358:0,111,255:37,0 chr2 99169370 . A . PASS END=99169370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr2 99169371 . G . PASS END=99169405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:37,0 chr2 99169406 . A . PASS END=99169406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 99169407 . G . PASS END=99169421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,962:0,81,255:31,0 chr2 99169422 . T . PASS END=99169430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,64,255:26,0 chr2 99169431 . A . PASS END=99169432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 99170734 . A . PASS END=99170740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,878:0,75,255:26,0 chr2 99170741 . A . PASS END=99170741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:23,0 chr2 99170742 . G . PASS END=99170749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 99170750 . C . PASS END=99170760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,87,255:30,0 chr2 99170761 . T . PASS END=99170761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 99170762 . G . PASS END=99170768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 99170769 . C . PASS END=99170769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 99170770 . C . PASS END=99170938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1058:0,82,255:40,0 chr2 99170939 . A . PASS END=99170940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:34:0,78,1170:0,102,255:26,0 chr2 99170941 . G . PASS END=99170943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 99170944 . G . PASS END=99170952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:30:0,66,990:0,86,255:26,0 chr2 99172016 . G . PASS END=99172017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 99172018 . G . PASS END=99172018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 99172019 . A . PASS END=99172020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,398:0,36,255:13,0 chr2 99172021 . A . PASS END=99172021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 99172022 . G . PASS END=99172022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:12,0 chr2 99172023 . T . PASS END=99172023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 99172024 . G . PASS END=99172024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 99172025 . T . PASS END=99172025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 99172026 . G . PASS END=99172026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 99172027 . G . PASS END=99172042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,537:0,45,255:18,0 chr2 99172043 . A . PASS END=99172051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:25,0 chr2 99172052 . T . PASS END=99172052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 99172053 . G . PASS END=99172054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 99172055 . A . PASS END=99172055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 99172056 . T . PASS END=99172068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 99172069 . G . PASS END=99172069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 99172070 . G . PASS END=99172072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 99172073 . A . PASS END=99172073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 99172074 . A . PASS END=99172074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 99172075 . G . PASS END=99172075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 99172076 . C . PASS END=99172085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:33,0 chr2 99172086 . A . PASS END=99172086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr2 99172087 . G . PASS END=99172178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1202:0,81,255:38,0 chr2 99172179 . G . PASS END=99172179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:31,0 chr2 99172180 . G . PASS END=99172196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:32,0 chr2 99172197 . C . PASS END=99172197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr2 99172198 . C . PASS END=99172199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 99172200 . T . PASS END=99172200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 99172201 . C . PASS END=99172206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:28,0 chr2 99172207 . T . PASS END=99172207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 99172208 . G . PASS END=99172213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 99172214 . T . PASS END=99172216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 99172217 . T . PASS END=99172217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:26,2 chr2 99172218 . C . PASS END=99172221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,978:0,21,255:26,2 chr2 99172222 . A . PASS END=99172222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,955:0,18,255:25,2 chr2 99172223 . T . PASS END=99172223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:1:29:0,1,877:0,1,255:22,2 chr2 99172224 . G . PASS END=99172230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,872:0,15,255:23,2 chr2 99172231 . C . PASS END=99172231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:21,0 chr2 99172232 . A . PASS END=99172239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 99172240 . C . PASS END=99172243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 99172244 . A G, 46.59 PASS DP=22;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=1.263;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,8,0:0.364,0.000:22:7,4,0:7,4,0:46:81,0,50,278,472,750:236,0,255:10,0:4.6589e+01,1.1701e-04,5.3000e+01,2.7826e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,2,6:8,6,4,4 chr2 99172245 . C . PASS END=99172254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,47,255:17,0 chr2 99172255 . T . PASS END=99172271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,32,255:13,0 chr2 99175926 . A . PASS END=99175958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1350:0,104,255:37,0 chr2 99179928 . G . PASS END=99179931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr2 99179932 . A . PASS END=99179932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:27,0 chr2 99179933 . T . PASS END=99179935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 99179936 . A . PASS END=99179936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 99179937 . G . PASS END=99179941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 99179942 . G . PASS END=99179942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 99179943 . C . PASS END=99179945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1164:0,93,255:31,0 chr2 99179946 . T . PASS END=99179946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:30,0 chr2 99179947 . T . PASS END=99179947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr2 99179948 . T . PASS END=99179948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 99179949 . A . PASS END=99179964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1150:0,80,255:33,0 chr2 99179965 . T . PASS END=99179965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1071:0,72,255:29,0 chr2 99179966 . C . PASS END=99180083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,86,255:40,0 chr2 99180084 . T . PASS END=99180085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 99180086 . G . PASS END=99180086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:23,0 chr2 99180087 . T . PASS END=99180097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,71,255:24,0 chr2 99180098 . A . PASS END=99180098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:20,0 chr2 99180099 . C . PASS END=99180100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 99181103 . C . PASS END=99181162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1027:0,81,255:31,0 chr2 99181163 . T . PASS END=99181209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr2 99181210 . C . PASS END=99181218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:17,0 chr2 99181219 . C . PASS END=99181220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 99181221 . C . PASS END=99181226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 99182103 . G . PASS END=99182108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 99182109 . A . PASS END=99182110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 99182111 . C . PASS END=99182111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr2 99182112 . T . PASS END=99182116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 99182117 . A . PASS END=99182146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,756:0,63,255:26,0 chr2 99182147 . G . PASS END=99182148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 99182149 . C . PASS END=99182154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 99182155 . G . PASS END=99182179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,928:0,87,255:29,0 chr2 99182180 . G . PASS END=99182180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 99182181 . C . PASS END=99182181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 99182182 . C . PASS END=99182184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr2 99182185 . T . PASS END=99182185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:25,0 chr2 99182186 . T . PASS END=99182191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 99182192 . G . PASS END=99182192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:23,0 chr2 99182193 . C . PASS END=99182206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:24,0 chr2 99182207 . C . PASS END=99182207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 99182208 . T . PASS END=99182229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:24,0 chr2 99182492 . C . PASS END=99182496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 99182497 . G . PASS END=99182499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 99182500 . T . PASS END=99182500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 99182501 . T . PASS END=99182530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,861:0,69,255:26,0 chr2 99182531 . G . PASS END=99182532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 99182533 . T . PASS END=99182534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr2 99182535 . G . PASS END=99182544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr2 99182545 . C . PASS END=99182545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 99182546 . C . PASS END=99182550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 99182551 . A . PASS END=99182556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 99182557 . A . PASS END=99182567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr2 99182568 . C . PASS END=99182588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr2 99182589 . C . PASS END=99182594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 99182595 . A . PASS END=99182627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr2 99182628 . G . PASS END=99182632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr2 99185034 . G . PASS END=99185131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,141,255:40,0 chr2 99189278 . G . PASS END=99189281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr2 99189282 . G . PASS END=99189282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 99189283 . C . PASS END=99189287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 99189288 . G . PASS END=99189307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:25,0 chr2 99189308 . T . PASS END=99189313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:28,0 chr2 99189314 . A . PASS END=99189314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:27,0 chr2 99189315 . G . PASS END=99189317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 99189318 . G . PASS END=99189318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr2 99189319 . C . PASS END=99189319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 99189320 . T . PASS END=99189320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 99189321 . G . PASS END=99189325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 99189326 . T . PASS END=99189335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,963:0,67,255:26,0 chr2 99189336 . G . PASS END=99189354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1008:0,80,255:31,0 chr2 99189355 . A . PASS END=99189355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:27,0 chr2 99189356 . A . PASS END=99189357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 99189358 . A . PASS END=99189358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 99189359 . A . PASS END=99189371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1096:0,90,255:30,0 chr2 99189372 . T . PASS END=99189372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,795:0,40,255:25,0 chr2 99189373 . C . PASS END=99189373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 99189374 . T . PASS END=99189374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,966:0,73,255:27,0 chr2 99189375 . C . PASS END=99189382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 99189383 . C . PASS END=99189383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 99189384 . T . PASS END=99189384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 99189385 . G . PASS END=99189390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 99193452 . A . PASS END=99193458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 99193459 . G . PASS END=99193460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 99193461 . C . PASS END=99193461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99193462 . G . PASS END=99193467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 99193468 . A . PASS END=99193495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,302:0,24,255:9,0 chr2 99193496 . C T, 0.01 DRAGENSnpHardQUAL DP=10;MQ=250.00;MQRankSum=1.393;ReadPosRankSum=1.393;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:3,1,0:6,0,0:26:9,0,50,36,314,350:9,0,255:9,0:1.0664e-02,2.6105e+01,7.9105e+01,6.1865e+01,3.7479e+02,3.7878e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,3,0,1:6,3,0,1 chr2 99193497 . G . PASS END=99193506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 99193507 . G . PASS END=99193516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 99193517 . G . PASS END=99193518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 99193519 . C . PASS END=99193533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr2 99193534 . A . PASS END=99193553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:15,0 chr2 99193554 . G . PASS END=99193554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 99193555 . A . PASS END=99193577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:16,0 chr2 99193578 . T . PASS END=99193578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 99193579 . T . PASS END=99193582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 99193583 . C . PASS END=99193583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 99193584 . C . PASS END=99193598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 99193599 . A . PASS END=99193606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 99194195 . C . PASS END=99194243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,125,255:40,0 chr2 99198039 . C . PASS END=99198041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 99198042 . T . PASS END=99198042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:26,0 chr2 99198043 . G . PASS END=99198181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1070:0,84,255:40,0 chr2 99198182 . G . PASS END=99198192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:32:0,75,1125:0,96,255:26,0 chr2 99198193 . C . PASS END=99198194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 99198195 . G . PASS END=99198219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:26,0 chr2 99198823 . G . PASS END=99198859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,159,255:40,0 chr2 99203939 . T . PASS END=99204057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:33:0,87,1305:0,94,255:40,0 chr2 99204058 . A . PASS END=99204060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 99204061 . T . PASS END=99204064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 99204065 . A . PASS END=99204071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:25,0 chr2 99206648 . G . PASS END=99206666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,111,1665:0,126,255:40,0 chr2 99207980 . T . PASS END=99207983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 99217212 . G . PASS END=99217212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,252,255:40,0 chr2 99217215 . T . PASS END=99217256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:70:0,120,1800:0,193,255:40,0 chr2 99220571 . C . PASS END=99220654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:51:0,113,1800:0,113,255:40,2 chr2 99224770 . C . PASS END=99224808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:25,0 chr2 99224809 . G . PASS END=99224809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 99224810 . T . PASS END=99224848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,876:0,69,255:26,0 chr2 99224849 . T . PASS END=99224862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:19:0,42,630:0,57,255:19,0 chr2 99224863 . A . PASS END=99224868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 99226172 . A . PASS END=99226172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 99226173 . T A, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=3.504;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:4,6,0:6,7,0:48:85,0,49,407,358,765:255,0,255:10,0:5.0000e+01,6.8598e-05,5.2350e+01,4.0737e+02,3.9252e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,6,6,7:6,4,9,4 chr2 99226174 . G . PASS END=99226182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 99226183 . G . PASS END=99226186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 99226187 . A . PASS END=99226188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 99226189 . G . PASS END=99226196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 99226197 . G . PASS END=99226198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 99226199 . A . PASS END=99226200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1046:0,87,255:29,0 chr2 99226201 . T . PASS END=99226201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 99226202 . G . PASS END=99226207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr2 99226208 . C . PASS END=99226209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 99226210 . T . PASS END=99226210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 99226211 . C . PASS END=99226285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1072:0,80,255:36,0 chr2 99226286 . G . PASS END=99226286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 99226287 . C . PASS END=99226316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 99226317 . A . PASS END=99226317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:28,0 chr2 99226318 . C . PASS END=99226318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 99226319 . A . PASS END=99226319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 99226320 . A . PASS END=99226327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 99226328 . A . PASS END=99226328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 99226329 . G . PASS END=99226329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 99226330 . A . PASS END=99226330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,984:0,60,255:26,0 chr2 99226331 . A . PASS END=99226351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1135:0,87,255:32,0 chr2 99226352 . A . PASS END=99226352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr2 99226353 . T . PASS END=99226357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:30,0 chr2 99226358 . T . PASS END=99226358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,991:0,57,255:29,0 chr2 99226359 . T . PASS END=99226382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1223:0,86,255:33,0 chr2 99226383 . T . PASS END=99226384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:37:0,75,1249:0,75,255:33,0 chr2 99226385 . T . PASS END=99226467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1005:0,80,255:36,0 chr2 99226468 . T . PASS END=99226468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 99226469 . G . PASS END=99226472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 99226473 . T . PASS END=99226473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,898:0,76,255:29,0 chr2 99226474 . C . PASS END=99226474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 99226475 . T . PASS END=99226475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr2 99226476 . T . PASS END=99226480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 99226481 . C . PASS END=99226490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,67,255:25,0 chr2 99226491 . T . PASS END=99226491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:22,0 chr2 99226492 . C . PASS END=99226495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 99226496 . C . PASS END=99226496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:24,0 chr2 99226497 . T . PASS END=99226498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:25,0 chr2 99226499 . T . PASS END=99226499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr2 99226500 . G . PASS END=99226502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 99227238 . T . PASS END=99227358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:47:0,120,1800:0,141,255:40,0 chr2 99232669 . G . PASS END=99232809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:45:0,114,1704:0,114,255:40,0 chr2 99232895 . A . PASS END=99232996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:75:0,120,1800:0,146,255:40,0 chr2 99234609 . T . PASS END=99234644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:69:0,120,1800:0,138,255:40,0 chr2 99234645 . A . PASS END=99234754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:81:37:0,81,1215:0,111,255:40,0 chr2 99234755 . C . PASS END=99234762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 99234763 . A . PASS END=99234767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:24,0 chr2 99237894 . T . PASS END=99237968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,110,1800:0,110,255:40,0 chr2 99242029 . T . PASS END=99242055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,1:112:99:106:0,120,1800:0,255,255:40,2 chr2 99242186 . C . PASS END=99242298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,134,255:40,0 chr2 99251685 . C . PASS END=99251751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:83:0,120,1800:0,233,255:40,0 chr2 99252980 . C . PASS END=99253058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,125,255:40,0 chr2 99256271 . C . PASS END=99256271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 99256272 . T . PASS END=99256273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 99256274 . T . PASS END=99256274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr2 99256275 . C . PASS END=99256275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 99256276 . T . PASS END=99256276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 99256277 . A . PASS END=99256284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1086:0,84,255:28,0 chr2 99256285 . T . PASS END=99256285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 99256286 . G . PASS END=99256290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1163:0,90,255:30,0 chr2 99256291 . A . PASS END=99256291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr2 99256292 . T . PASS END=99256292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 99256293 . C . PASS END=99256294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 99256295 . A . PASS END=99256301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 99256302 . A . PASS END=99256302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,824:0,73,255:29,0 chr2 99256303 . C . PASS END=99256464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1103:0,84,255:40,0 chr2 99256584 . C . PASS END=99256691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:37:0,81,1268:0,81,255:40,0 chr2 99260386 . T . PASS END=99260388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr2 99260389 . A . PASS END=99260389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 99260390 . T . PASS END=99260511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:31:0,80,1141:0,80,255:40,0 chr2 99260512 . T . PASS END=99260512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1181:0,74,255:31,0 chr2 99260513 . T . PASS END=99260516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:31,0 chr2 99261891 . C . PASS END=99262005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:54:0,120,1800:0,153,255:40,0 chr2 99271908 . C . PASS END=99271983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:59:0,120,1800:0,161,255:40,0 chr2 99272815 . C . PASS END=99272839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1358:0,100,255:40,0 chr2 99272840 . A . PASS END=99272928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:88:35:0,88,1221:0,88,255:40,0 chr2 99274681 . T . PASS END=99274727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:44:0,115,1485:0,115,255:40,0 chr2 99279509 . C . PASS END=99279510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 99279511 . C . PASS END=99279642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:83:30:0,83,1119:0,83,255:40,0 chr2 99279804 . C . PASS END=99279822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:104:0,120,1800:0,255,255:40,0 chr2 99291498 . C . PASS END=99291638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:48:0,115,1788:0,115,255:40,0 chr2 99294767 . C . PASS END=99294774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:31,0 chr2 99294775 . T . PASS END=99294775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 99294776 . T . PASS END=99294934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:31:0,93,1127:0,93,255:40,0 chr2 99304794 . A G, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,13,0:0,22,0:102:190,105,0,1357,105,1357:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,22,13 chr2 99342661 . C . PASS END=99342795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,108,1508:0,108,255:40,0 chr2 99410995 . C . PASS END=99411137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,114,1710:0,121,255:40,0 chr2 99412583 . C . PASS END=99412603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1186:0,86,255:39,1 chr2 99412604 . A . PASS END=99412604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:53:42:0,53,1401:0,53,255:38,1 chr2 99412605 . G . PASS END=99412605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:75:42:0,75,1469:0,75,255:37,1 chr2 99412606 . A . PASS END=99412638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:41:0,91,1373:0,91,255:40,1 chr2 99412639 . T . PASS END=99412639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:74:49:0,74,1345:0,74,255:40,0 chr2 99412640 . T . PASS END=99412727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,99,1485:0,113,255:40,0 chr2 99413813 . C . PASS END=99413818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 99413819 . T . PASS END=99413819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:25,0 chr2 99413820 . C . PASS END=99413820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 99413821 . T . PASS END=99413821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 99413822 . C . PASS END=99413960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:30:0,80,1125:0,80,255:40,0 chr2 99413961 . T . PASS END=99413994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,845:0,69,255:26,0 chr2 99413995 . T . PASS END=99413995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 99413996 . C . PASS END=99414000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 99436092 . T . PASS END=99436099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:63:0,120,1800:0,173,255:40,0 chr2 99438320 . C . PASS END=99438321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 99438322 . G . PASS END=99438322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr2 99438323 . C . PASS END=99438327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr2 99438328 . C . PASS END=99438385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,520:0,41,255:18,0 chr2 99438386 . G . PASS END=99438386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 99438387 . G . PASS END=99438408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 99438409 . T . PASS END=99438410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 99438411 . G . PASS END=99438416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 99438417 . G . PASS END=99438453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr2 99438454 . G . PASS END=99438457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 99438458 . G . PASS END=99438491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr2 99438492 . C . PASS END=99438501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr2 99438502 . T . PASS END=99438511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 99438512 . G . PASS END=99438562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:19,0 chr2 99438563 . C . PASS END=99438571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 99438572 . G . PASS END=99438572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,673:0,8,255:19,0 chr2 99438573 . C . PASS END=99438576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 99438577 . G . PASS END=99438577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 99438578 . T . PASS END=99438583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 99438584 . A . PASS END=99438584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 99438585 . C . PASS END=99438637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,807:0,62,255:26,0 chr2 99438638 . A . PASS END=99438638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:23,0 chr2 99438639 . G . PASS END=99438642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:25,0 chr2 99438643 . C . PASS END=99438646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 99438647 . C . PASS END=99438650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 99438651 . G . PASS END=99438653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 99438654 . T . PASS END=99438654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr2 99438655 . T . PASS END=99438663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 99438664 . A . PASS END=99438664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 99438665 . G . PASS END=99438667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 99438668 . A . PASS END=99438668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1053:0,60,255:26,0 chr2 99438669 . G . PASS END=99438684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:30,0 chr2 99438685 . A . PASS END=99438685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr2 99438686 . C . PASS END=99438710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr2 99438711 . C . PASS END=99438711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:28,0 chr2 99438712 . G . PASS END=99438716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 99438717 . C . PASS END=99438719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 99438720 . C . PASS END=99438727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:28,0 chr2 99438728 . C . PASS END=99438732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 99438733 . G . PASS END=99438736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 99438737 . A . PASS END=99438764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:26,0 chr2 99438765 . C . PASS END=99438781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:19:0,47,729:0,47,255:19,0 chr2 99438782 . T . PASS END=99438782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,668:0,24,255:18,0 chr2 99438783 . G . PASS END=99438795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 99438796 . G . PASS END=99438796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 99438797 . G . PASS END=99438809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 99438810 . G . PASS END=99438810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 99438811 . T . PASS END=99438811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 99438812 . C . PASS END=99438815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 99438816 . C . PASS END=99438818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 99438819 . G . PASS END=99438837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:25,0 chr2 99438838 . G . PASS END=99438838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 99438839 . C . PASS END=99438840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 99438841 . A . PASS END=99438841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr2 99438842 . G . PASS END=99438869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,917:0,75,255:26,0 chr2 99438870 . G . PASS END=99438870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 99438871 . G . PASS END=99438881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 99438882 . A . PASS END=99438882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 99438883 . C . PASS END=99438900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,678:0,60,255:21,0 chr2 99438901 . G . PASS END=99438902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 99438903 . C . PASS END=99438903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 99438904 . G . PASS END=99438924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 99438925 . C . PASS END=99438931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:12,0 chr2 99438932 . T . PASS END=99438932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 99438933 . C . PASS END=99438939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:11,0 chr2 99438940 . G . PASS END=99438947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,405:0,20,255:9,0 chr2 99438948 . G . PASS END=99438948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 99438949 . C . PASS END=99438956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 99438957 . C . PASS END=99438969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:7:0,11,225:0,11,249:6,0 chr2 99438970 . C . PASS END=99438973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 99438974 . A . PASS END=99438976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 99438977 . C . PASS END=99438977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 99438978 . G . PASS END=99438978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 99438979 . C . PASS END=99438986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr2 99438987 . A . PASS END=99438987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 99438988 . G . PASS END=99438991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 99438992 . G . PASS END=99439108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 99439109 . C . PASS END=99439113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr2 99439114 . T . PASS END=99439168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr2 99439169 . C . PASS END=99439187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,250:0,24,250:9,0 chr2 99439188 . G . PASS END=99439197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 99439198 . G . PASS END=99439206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439207 . G . PASS END=99439228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr2 99439229 . C . LowGQ END=99439229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr2 99439230 . G . PASS END=99439242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:13,0 chr2 99439243 . A . PASS END=99439246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 99439247 . A . PASS END=99439247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 99439248 . G . PASS END=99439248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr2 99439249 . C . PASS END=99439250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 99439251 . C . PASS END=99439251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 99439252 . T . PASS END=99439252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:12,0 chr2 99439253 . T . PASS END=99439256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 99439257 . C . PASS END=99439258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 99439259 . C . PASS END=99439259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 99439260 . C . PASS END=99439260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 99439261 . G . PASS END=99439261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 99439262 . G . PASS END=99439268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 99439269 . C . PASS END=99439269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 99439270 . G . PASS END=99439271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 99439272 . G . PASS END=99439272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 99439273 . G . PASS END=99439277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr2 99439278 . C . PASS END=99439280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 99439281 . C . PASS END=99439281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr2 99439282 . G . PASS END=99439287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 99439288 . G . PASS END=99439288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 99439289 . G . PASS END=99439290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr2 99439291 . T . PASS END=99439291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 99439292 . C . PASS END=99439301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr2 99439302 . T . PASS END=99439302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 99439303 . C . PASS END=99439305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 99439306 . T . PASS END=99439306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 99439307 . C . PASS END=99439318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:12,0 chr2 99439319 . C . PASS END=99439319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:9,0 chr2 99439320 . C . PASS END=99439324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 99439325 . C . LowGQ END=99439325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:8,0 chr2 99439326 . T . PASS END=99439326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:8,0 chr2 99439327 . C . PASS END=99439330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 99439331 . C . LowGQ END=99439331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,277:3,0,255:7,0 chr2 99439332 . G . PASS END=99439335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439336 . T . PASS END=99439337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 99439338 . C . PASS END=99439338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,319:0,30,255:10,0 chr2 99439339 . G . PASS END=99439343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439344 . C . PASS END=99439344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 99439345 . G . PASS END=99439345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439346 . C . PASS END=99439346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 99439347 . T . PASS END=99439350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439351 . C . PASS END=99439351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 99439352 . T . PASS END=99439356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 99439357 . G . LowGQ END=99439357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr2 99439358 . G . PASS END=99439359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 99439360 . T . PASS END=99439361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:8,0 chr2 99439362 . A . PASS END=99439362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 99439363 . G . PASS END=99439363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr2 99439364 . G . PASS END=99439364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 99439365 . C . PASS END=99439366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 99439367 . C . PASS END=99439367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 99439368 . C . PASS END=99439372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439373 . C . LowGQ END=99439373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,269:3,0,255:7,0 chr2 99439374 . T . PASS END=99439377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 99439378 . G . PASS END=99439378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:6,0 chr2 99439379 . G . PASS END=99439379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 99439380 . C . PASS END=99439390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:8:0,10,233:0,10,233:6,0 chr2 99439391 . C . PASS END=99439391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 99439392 . A . PASS END=99439392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 99439393 . T . PASS END=99439394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 99439395 . C . PASS END=99439401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 99439402 . A . LowGQ END=99439402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:5,0 chr2 99439403 . C . PASS END=99439417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 99439418 . C . PASS END=99439427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 99439428 . C . LowGQ END=99439428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:7,0,247:7,0 chr2 99439429 . G . PASS END=99439469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 99439470 . T . PASS END=99439470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 99439471 . G . PASS END=99439500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,282:0,27,255:9,0 chr2 99439501 . G . PASS END=99439502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 99439503 . C . PASS END=99439503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 99439504 . G . PASS END=99439504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 99439505 . T . PASS END=99439508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439509 . C . LowGQ END=99439509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:8,0 chr2 99439510 . C . PASS END=99439514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439515 . A . PASS END=99439515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 99439516 . G . PASS END=99439525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 99439526 . T . PASS END=99439526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439527 . G . PASS END=99439542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:10,0 chr2 99439543 . A . PASS END=99439543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 99439544 . C . PASS END=99439545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 99439546 . T . PASS END=99439546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,378:0,20,255:10,0 chr2 99439547 . C . PASS END=99439547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 99439548 . T . PASS END=99439548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 99439549 . T . PASS END=99439551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 99439552 . G . PASS END=99439552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 99439553 . G . PASS END=99439556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 99439557 . A . PASS END=99439590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 99439591 . G . PASS END=99439604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 99439605 . G . PASS END=99439612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 99439613 . C . PASS END=99439613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 99439614 . C . PASS END=99439640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,296:0,27,255:9,0 chr2 99439641 . A . PASS END=99439641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 99439642 . C . PASS END=99439645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,333:0,27,255:9,0 chr2 99439646 . G . PASS END=99439646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 99439647 . A . PASS END=99439659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr2 99439660 . T . LowGQ END=99439660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,227:12,0,239:7,0 chr2 99439661 . C . PASS END=99439664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 99439665 . C . PASS END=99439670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:8:0,10,270:0,10,255:6,0 chr2 99439671 . C . PASS END=99439675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr2 99439676 . G . LowGQ END=99439676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr2 99439677 . C . PASS END=99439685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 99439686 . G . PASS END=99439714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,329:0,30,255:13,0 chr2 99439715 . G . PASS END=99439718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr2 99439719 . C . PASS END=99439719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 99439720 . G . PASS END=99439728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 99439729 . G . PASS END=99439734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 99439735 . C . PASS END=99439735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,490:0,17,255:13,0 chr2 99439736 . T . PASS END=99439737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,476:0,9,255:13,0 chr2 99439738 . G . PASS END=99439738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 99439739 . A . PASS END=99439742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 99439743 . G . PASS END=99439760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,613:0,40,255:19,0 chr2 99439761 . C . PASS END=99439761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 99439762 . C . PASS END=99439762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:19,0 chr2 99439763 . C . PASS END=99439771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 99439772 . C . PASS END=99439772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 99439773 . G . PASS END=99439777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr2 99439778 . C . PASS END=99439778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 99439779 . C . PASS END=99439795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr2 99439796 . G . PASS END=99439796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 99439797 . C . PASS END=99439803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr2 99439804 . C . PASS END=99439804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 99439805 . G . PASS END=99439806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 99439807 . G . PASS END=99439807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 99439808 . C . PASS END=99439832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:24,0 chr2 99439833 . T . PASS END=99439843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,759:0,47,255:19,0 chr2 99439844 . G . PASS END=99439870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:21,0 chr2 99439871 . T . PASS END=99439871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 99439872 . G . PASS END=99439881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 99439882 . A . PASS END=99439913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr2 99439914 . T . PASS END=99439915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr2 99439916 . G . PASS END=99439916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 99439917 . G . PASS END=99439917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 99439918 . C . PASS END=99439945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,568:0,40,255:19,0 chr2 99439946 . T . PASS END=99439946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 99439947 . T . PASS END=99439964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,621:0,40,255:16,0 chr2 99439965 . G . PASS END=99439965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 99439966 . C . PASS END=99439981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr2 99439982 . G . PASS END=99439987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr2 99439988 . C . PASS END=99439989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 99439990 . G . PASS END=99439990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 99439991 . A . PASS END=99439991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 99439992 . C . PASS END=99439992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:8,0 chr2 99439993 . T . PASS END=99439995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 99439996 . G . PASS END=99439996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 99439997 . C . PASS END=99439998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,405:0,20,255:9,0 chr2 99439999 . C . PASS END=99439999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 99440000 . G . PASS END=99440000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 99443438 . C . PASS END=99443438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 99443439 . G . PASS END=99443439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 99443440 . A . PASS END=99443440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1076:0,87,255:29,0 chr2 99443441 . T . PASS END=99443442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,999:0,71,255:28,0 chr2 99443443 . A . PASS END=99443443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 99443444 . G . PASS END=99443444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 99443445 . A . PASS END=99443448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 99443449 . G . PASS END=99443449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:28,0 chr2 99443450 . C . PASS END=99443452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 99443453 . C . PASS END=99443453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 99443454 . A . PASS END=99443457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:31:0,86,1196:0,86,255:33,0 chr2 99443458 . T . PASS END=99443458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:32,0 chr2 99443459 . A . PASS END=99443480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1186:0,86,255:34,0 chr2 99443481 . T . PASS END=99443481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1215:0,78,255:31,0 chr2 99443482 . T . PASS END=99443494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1288:0,84,255:34,0 chr2 99443495 . G . PASS END=99443495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr2 99443496 . T . PASS END=99443593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1188:0,85,255:39,0 chr2 99443594 . G . PASS END=99443594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 99443595 . G . PASS END=99443609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1202:0,83,255:32,0 chr2 99443610 . T . PASS END=99443632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,848:0,61,255:26,0 chr2 99448811 . C . PASS END=99448949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1081:0,82,255:40,0 chr2 99448950 . A . PASS END=99448950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 99448951 . T . PASS END=99448951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 99448952 . T . PASS END=99448975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:26:0,61,886:0,61,255:26,0 chr2 99449325 . C . PASS END=99449327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr2 99449328 . C . PASS END=99449328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:17,0 chr2 99449329 . A . PASS END=99449330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 99449331 . A . PASS END=99449331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 99449332 . G . PASS END=99449335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 99449336 . T . PASS END=99449337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 99449338 . A . PASS END=99449341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 99449342 . G . PASS END=99449342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 99449343 . A . PASS END=99449343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 99449344 . T . PASS END=99449344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 99449345 . C . PASS END=99449355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 99449356 . T . PASS END=99449356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 99449357 . C . PASS END=99449357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 99449358 . T . PASS END=99449359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 99449360 . G . PASS END=99449364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 99449365 . A . PASS END=99449366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr2 99449367 . C . PASS END=99449367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 99449368 . A . PASS END=99449368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 99449369 . C . PASS END=99449371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 99449372 . G . PASS END=99449372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 99449373 . C . PASS END=99449374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 99449375 . C . PASS END=99449376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 99449377 . G . PASS END=99449377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 99449378 . G . PASS END=99449378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 99449379 . C . PASS END=99449380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 99449381 . G . PASS END=99449381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 99449382 . A . PASS END=99449382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 99449383 . G . PASS END=99449383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 99449384 . T . PASS END=99449400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,69,255:24,0 chr2 99449401 . T . PASS END=99449401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 99449402 . C . PASS END=99449416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,840:0,72,255:24,0 chr2 99449417 . T . PASS END=99449417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 99449418 . G . PASS END=99449425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 99449426 . A . PASS END=99449426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,811:0,56,255:22,0 chr2 99449427 . A . PASS END=99449433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 99449434 . C . PASS END=99449460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,670:0,57,255:19,0 chr2 99454582 . T . PASS END=99454750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:31:0,93,1151:0,93,255:40,0 chr2 99463194 . C . PASS END=99463273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,112,1800:0,112,255:40,0 chr2 99485541 . C . PASS END=99485545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,911:0,62,255:26,0 chr2 99485546 . G . PASS END=99485551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:28,0 chr2 99485552 . C . PASS END=99485552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 99485553 . C . PASS END=99485560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 99485561 . C . PASS END=99485562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 99485563 . G . PASS END=99485564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 99485565 . T . PASS END=99485565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 99485566 . A . PASS END=99485570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:29,0 chr2 99485571 . G . PASS END=99485571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 99485572 . C . PASS END=99485576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 99485577 . A . PASS END=99485594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,900:0,61,255:26,0 chr2 99485595 . T . PASS END=99485595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr2 99485596 . G . PASS END=99485596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 99485597 . A . PASS END=99485597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 99485598 . G . PASS END=99485598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 99485599 . C . PASS END=99485599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 99485600 . C . PASS END=99485604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 99485605 . G . PASS END=99485609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:56:21:0,56,853:0,56,255:19,0 chr2 99485610 . C . PASS END=99485614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 99513840 . C . PASS END=99513871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,188,255:40,0 chr2 99614660 . T . PASS END=99614684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:85:0,120,1800:0,237,255:40,0 chr2 99634663 . T . PASS END=99634812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:56:0,120,1800:0,164,255:40,0 chr2 99634999 . C . PASS END=99635103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,108,1620:0,131,255:40,0 chr2 99636743 . A . PASS END=99636751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:24,0 chr2 99636752 . T . PASS END=99636752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:23,0 chr2 99636753 . C . PASS END=99636757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,970:0,75,255:26,0 chr2 99636758 . A . PASS END=99636932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1064:0,86,255:40,0 chr2 99636933 . A . PASS END=99636945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:28:0,66,990:0,74,255:24,0 chr2 99643672 . C . PASS END=99643680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,121,255:40,0 chr2 99645219 . C . PASS END=99645346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:43:0,99,1485:0,120,255:40,0 chr2 99645347 . T . PASS END=99645347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1391:0,74,255:28,0 chr2 99651693 . C . PASS END=99651902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,102,1579:0,102,255:40,0 chr2 99681402 . T . PASS END=99681407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1350:0,99,255:33,0 chr2 99681408 . A . PASS END=99681408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:33,0 chr2 99681409 . A . PASS END=99681587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:37:0,93,1427:0,93,255:40,0 chr2 99685351 . T . PASS END=99685461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,3:111:99:72:0,120,1800:0,184,255:40,1 chr2 99688169 . C . PASS END=99688337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:28:0,84,996:0,84,255:40,0 chr2 99689481 . C . PASS END=99689536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:57:0,120,1800:0,152,255:40,0 chr2 99695122 . T . PASS END=99695276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:37:0,93,1239:0,103,255:40,0 chr2 99697745 . C . PASS END=99697860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,105,1513:0,105,255:40,0 chr2 99720430 . C . PASS END=99720581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:55:0,120,1800:0,127,255:40,0 chr2 99721822 . A . PASS END=99721857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:31:0,89,1082:0,89,255:40,0 chr2 99721858 . T . PASS END=99721899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,127,255:40,0 chr2 99721990 . C . PASS END=99722160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,123,255:40,0 chr2 99725296 . C . PASS END=99725436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,146,255:40,0 chr2 99725437 . T . PASS END=99725454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:51:0,90,1350:0,146,255:40,0 chr2 99725852 . C . PASS END=99726005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:38:0,96,1316:0,101,255:40,0 chr2 99726006 . G . PASS END=99726019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1200:0,83,255:31,0 chr2 99727313 . A . PASS END=99727345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:57:0,120,1800:0,134,255:40,0 chr2 99727346 . T . PASS END=99727378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:81:66:0,81,1215:0,119,255:40,0 chr2 99734007 . C . PASS END=99734222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,99,1485:0,113,255:40,0 chr2 99743511 . C . PASS END=99743639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,105,1575:0,117,255:40,2 chr2 99757531 . C . PASS END=99757546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,922:0,62,255:26,0 chr2 99757547 . T . PASS END=99757547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:24,0 chr2 99757548 . G . PASS END=99757550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,961:0,75,255:25,0 chr2 99757551 . G . PASS END=99757551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 99757552 . C . PASS END=99757562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,930:0,62,255:26,0 chr2 99757563 . T . PASS END=99757563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 99757564 . C . PASS END=99757564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:26,0 chr2 99757565 . C . PASS END=99757568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 99757569 . G . PASS END=99757569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:26,0 chr2 99757570 . G . PASS END=99757586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr2 99757587 . C . PASS END=99757594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1072:0,76,255:26,0 chr2 99757595 . G . PASS END=99757602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:28,0 chr2 99763931 . A . PASS END=99763956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,148,255:40,0 chr2 99766946 . T . PASS END=99766946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1335:0,70,255:36,0 chr2 99766947 . A . PASS END=99766948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1449:0,104,255:38,0 chr2 99766949 . T . PASS END=99766950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1294:0,70,255:37,0 chr2 99766951 . A . PASS END=99766952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:40:0,110,1482:0,110,255:40,0 chr2 99766953 . G . PASS END=99766953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1441:0,71,255:40,0 chr2 99766954 . T . PASS END=99766955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1574:0,113,255:40,0 chr2 99766956 . G . PASS END=99766956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1537:0,58,255:40,0 chr2 99766957 . A . PASS END=99766973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:83:46:0,83,1532:0,83,255:40,0 chr2 99766974 . C . PASS END=99767282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:88:32:0,88,1166:0,88,255:40,2 chr2 99767283 . A . PASS END=99767283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 99767284 . C . PASS END=99767291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1194:0,93,255:31,0 chr2 99767292 . G . PASS END=99767292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 99767293 . A . PASS END=99767296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:29,0 chr2 99767297 . A . PASS END=99767297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr2 99778421 . A . PASS END=99778422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 99778423 . G . PASS END=99778423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 99778424 . C . PASS END=99778424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr2 99778425 . T . PASS END=99778431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr2 99778432 . A . PASS END=99778432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:19,0 chr2 99778433 . T . PASS END=99778434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 99778435 . T . PASS END=99778435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 99778436 . T . PASS END=99778446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:61:21:0,61,731:0,61,255:26,0 chr2 99778447 . T . PASS END=99778447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 99778448 . T . PASS END=99778448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 99778449 . G . PASS END=99778451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 99778452 . T . PASS END=99778452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr2 99778453 . C . PASS END=99778453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 99778454 . C . PASS END=99778454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:27,0 chr2 99778455 . A . PASS END=99778457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 99778458 . T . PASS END=99778458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 99778459 . A . PASS END=99778581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:27:0,80,956:0,80,255:40,0 chr2 99778582 . T . PASS END=99778582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1515:0,72,255:40,0 chr2 99778583 . A . PASS END=99778684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:94:42:0,94,1451:0,94,255:40,0 chr2 99778685 . A . PASS END=99778685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1443:0,63,255:39,0 chr2 99778686 . T . PASS END=99778689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:96:45:0,96,1548:0,96,255:40,0 chr2 99778690 . A . PASS END=99778690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:47:47:0,47,1462:0,47,255:40,0 chr2 99778691 . G . PASS END=99778691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1644:0,67,255:40,0 chr2 99778692 . A . PASS END=99778693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:47:0,102,1585:0,102,255:40,0 chr2 99778694 . G . PASS END=99778694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1615:0,67,255:40,0 chr2 99778695 . A . PASS END=99778947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:47:0,105,1662:0,105,255:40,0 chr2 99778948 . C . PASS END=99778984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:42:0,90,1416:0,90,255:40,0 chr2 99778985 . T C, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.750;ReadPosRankSum=2.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,26,0:0.565,0.000:46:11,11,0:9,15,0:48:85,0,49,901,687,1588:255,0,255:17,0:5.0000e+01,7.3517e-05,5.1585e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,9,17:10,10,16,10 chr2 99778986 . T . PASS END=99779022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,111,1590:0,116,255:40,0 chr2 99779023 . G . PASS END=99779093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,131,255:40,0 chr2 99779094 . A . PASS END=99779130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,111,1665:0,111,255:40,0 chr2 99779131 . T C, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=3.054;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,23,0:0.511,0.000:45:13,8,0:9,15,0:48:85,0,50,804,787,1590:255,0,255:22,0:5.0000e+01,6.5492e-05,5.2957e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,6,14,9:11,11,9,14 chr2 99779132 . T . PASS END=99779168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:97:45:0,97,1598:0,97,255:40,0 chr2 99779169 . C . PASS END=99779221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,129,255:40,0 chr2 99779222 . A . PASS END=99779222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:72:54:0,72,1363:0,72,255:40,0 chr2 99779223 . C . PASS END=99779542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,121,255:40,0 chr2 99784113 . T . PASS END=99784175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,167,255:40,0 chr2 99784254 . T . PASS END=99784254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 99784255 . T . PASS END=99784291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,187,255:40,0 chr2 99784292 . G A, 50.00 PASS DP=76;MQ=250.00;MQRankSum=7.493;ReadPosRankSum=3.772;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,39,0:0.513,0.000:76:16,21,0:21,18,0:48:85,0,50,1302,1314,2616:255,0,255:28,0:5.0000e+01,6.5233e-05,5.2968e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,22,15,24:14,23,19,20 chr2 99784293 . T . PASS END=99784306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,186,255:40,0 chr2 99784307 . G A, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.792;ReadPosRankSum=3.634;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,34,0:0.540,0.000:63:13,19,0:16,15,0:48:85,0,50,1158,1029,2187:255,0,255:27,0:5.0000e+01,6.7563e-05,5.2536e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,21,11,23:14,15,16,18 chr2 99784308 . A . PASS END=99784310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,159,255:40,0 chr2 99785838 . T . PASS END=99785838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 99785839 . C . PASS END=99785841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 99785842 . A . PASS END=99785850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr2 99785851 . G . PASS END=99785851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr2 99785852 . T . PASS END=99785855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:27,0 chr2 99785856 . C . PASS END=99785856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 99785857 . T . PASS END=99785858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 99785859 . C . PASS END=99785859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:26,0 chr2 99785860 . T . PASS END=99785863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr2 99785864 . G . PASS END=99785864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,959:0,54,255:27,0 chr2 99785865 . A . PASS END=99785866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 99785867 . A . PASS END=99785867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1052:0,74,255:28,0 chr2 99785868 . A . PASS END=99785868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 99785869 . A . PASS END=99785869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1021:0,60,255:28,0 chr2 99785870 . T . PASS END=99785870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 99785871 . G . PASS END=99785871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1078:0,44,255:30,0 chr2 99785872 . T . PASS END=99785872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 99785873 . C . PASS END=99785873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1106:0,39,255:30,0 chr2 99785874 . T . PASS END=99785874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1257:0,89,255:33,0 chr2 99785875 . A . PASS END=99785875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1149:0,58,255:32,0 chr2 99785876 . C . LowGQ END=99785876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:0:36:0,0,1053:11,0,255:30,0 chr2 99785877 . T . PASS END=99785877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:34,0 chr2 99785878 . G . PASS END=99785878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:13:36:0,13,1057:0,13,255:31,0 chr2 99785879 . T . PASS END=99785880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:35,0 chr2 99785881 . G . PASS END=99785881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1114:0,42,255:31,0 chr2 99785882 . T . PASS END=99785884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 99785885 . C . PASS END=99785885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1213:0,56,255:34,0 chr2 99785886 . A . PASS END=99785886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1235:0,78,255:34,0 chr2 99785887 . T . PASS END=99785890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:37:0,90,1304:0,90,255:39,0 chr2 99785891 . A . PASS END=99785891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:29:41:0,29,1272:0,29,255:37,0 chr2 99785892 . T . PASS END=99785892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 99785893 . G . PASS END=99785893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1384:0,79,255:39,0 chr2 99785894 . G . PASS END=99785894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:29:42:0,29,1269:0,29,255:36,0 chr2 99785895 . T . PASS END=99785895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1409:0,87,255:39,0 chr2 99785896 . C . PASS END=99785896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:13:42:0,13,1252:0,13,255:34,0 chr2 99785897 . T . PASS END=99785902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1401:0,93,255:40,0 chr2 99785903 . C . LowGQ END=99785903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:0:42:0,0,1192:18,0,255:33,0 chr2 99785904 . A . PASS END=99785907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,106,1373:0,106,255:36,0 chr2 99785908 . T . PASS END=99785909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:41:0,54,1289:0,54,255:34,0 chr2 99785910 . A . PASS END=99785910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 99785911 . C . PASS END=99785911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:26:43:0,26,1327:0,26,255:34,0 chr2 99785912 . A . PASS END=99785913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:38,0 chr2 99785914 . T . PASS END=99785914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:24:43:0,24,1278:0,24,255:33,0 chr2 99785915 . A . PASS END=99785915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1534:0,105,255:40,0 chr2 99785916 . T . PASS END=99785916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:22:46:0,22,1283:0,22,255:37,0 chr2 99785917 . C . PASS END=99785919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:88:46:0,88,1430:0,88,255:40,0 chr2 99785920 . A . PASS END=99785920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:38:46:0,38,1202:0,38,255:38,0 chr2 99785921 . G . PASS END=99785922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,100,1656:0,100,255:40,0 chr2 99785923 . G . LowGQ END=99785923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,8:50:0:50:0,0,1340:55,0,255:40,1 chr2 99785924 . A . PASS END=99785926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:96:49:0,96,1702:0,96,255:40,1 chr2 99785927 . A . PASS END=99785927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:42:49:0,42,1399:0,42,255:40,1 chr2 99785928 . A . PASS END=99785933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,120,1800:0,131,255:40,0 chr2 99785959 . T . PASS END=99785978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,156,255:40,0 chr2 99785979 . G . PASS END=99786073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,176,255:40,0 chr2 99787000 . C . PASS END=99787006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr2 99787007 . C . PASS END=99787007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 99787008 . T . PASS END=99787008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 99787009 . C . PASS END=99787009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 99787010 . G . PASS END=99787115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,1055:0,84,255:40,0 chr2 99787806 . T . PASS END=99787892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:71:0,120,1800:0,180,255:40,0 chr2 99787973 . C . PASS END=99788109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:63:0,120,1800:0,139,255:40,0 chr2 99789901 . T . PASS END=99789965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:41:0,94,1590:0,94,255:40,0 chr2 99790378 . C . PASS END=99790479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,116,1576:0,116,255:40,0 chr2 99797283 . T . PASS END=99797283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr2 99797284 . C . PASS END=99797304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:18,0 chr2 99797305 . T . PASS END=99797305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 99797306 . G . PASS END=99797306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:19,0 chr2 99797307 . C . PASS END=99797325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:24,0 chr2 99797326 . T . PASS END=99797326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 99797327 . C . PASS END=99797332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 99797333 . A . PASS END=99797333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr2 99797334 . A . PASS END=99797369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,917:0,75,255:26,0 chr2 99797370 . T . PASS END=99797381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:29,0 chr2 99797382 . C . PASS END=99797384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 99797385 . C . PASS END=99797410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1155:0,80,255:36,0 chr2 99797411 . T . PASS END=99797411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr2 99797412 . C . PASS END=99797416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 99797417 . G . PASS END=99797417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr2 99797418 . G . PASS END=99797506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1215:0,90,255:40,0 chr2 99797507 . G . PASS END=99797515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr2 99797516 . T . PASS END=99797519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:26:0,48,720:0,78,255:19,0 chr2 99802640 . C . PASS END=99802717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:77:0,120,1800:0,231,255:40,0 chr2 99804640 . A . PASS END=99804641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,171,255:40,0 chr2 99804642 . T C, 44.33 PASS DP=58;MQ=249.97;MQRankSum=6.338;ReadPosRankSum=2.444;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,22,0:0.379,0.000:58:15,9,0:21,13,0:44:79,0,50,684,1279,1964:255,0,255:35,0:4.4332e+01,1.8198e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,11,12,10:20,16,9,13 chr2 99804643 . G . PASS END=99804679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,166,255:40,0 chr2 99804680 . G . PASS END=99804720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:81:0,120,1800:0,198,255:40,0 chr2 99811214 . G . PASS END=99811387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:57:0,120,1800:0,172,255:40,0 chr2 99811579 . G . PASS END=99811695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:84:0,120,1800:0,219,255:40,0 chr2 99812036 . A . PASS END=99812069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,117,1755:0,123,255:40,0 chr2 99812070 . G A, 48.98 PASS DP=55;MQ=195.26;MQRankSum=-2.181;ReadPosRankSum=3.352;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,24,0:0.436,0.000:55:22,11,0:9,13,0:46:84,0,47,184,184,184:255,0,255:30,0:4.8982e+01,9.8368e-05,5.0000e+01,1.8375e+02,2.1852e+02,1.8676e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,16,7,17:22,9,10,14 chr2 99812071 . C . PASS END=99812107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,146,255:40,0 chr2 99812108 . T . PASS END=99812168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:40:0,96,1440:0,104,255:40,0 chr2 99858827 . C . PASS END=99858945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,132,255:40,0 chr2 99859919 . T . PASS END=99859935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:120:0,120,1800:0,255,255:40,0 chr2 99860433 . T . PASS END=99860588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:32:0,81,1215:0,95,255:40,0 chr2 99860589 . T . PASS END=99860600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 99861725 . C . PASS END=99861731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1119:0,90,255:30,0 chr2 99861732 . A . PASS END=99861732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 99861733 . A . PASS END=99861741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 99861742 . T . PASS END=99861742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 99861743 . A . PASS END=99861743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:26,0 chr2 99861744 . A . PASS END=99861749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 99861750 . C . PASS END=99861750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:26,0 chr2 99861751 . T . PASS END=99861899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:29:0,80,1163:0,80,255:40,0 chr2 99861900 . A . PASS END=99861900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr2 99861901 . A . PASS END=99861906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 99861907 . C . PASS END=99861907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 99861908 . A . PASS END=99861913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:29,0 chr2 99861914 . A . PASS END=99861915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1075:0,60,255:27,0 chr2 99861916 . G . PASS END=99861917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 99861918 . A . PASS END=99861918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:27,0 chr2 99861919 . T . PASS END=99861921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 99863143 . C . PASS END=99863147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:31,0 chr2 99863148 . T . PASS END=99863148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 99863149 . T . PASS END=99863149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1297:0,108,255:36,0 chr2 99863150 . C . PASS END=99863150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:35,0 chr2 99863151 . A . PASS END=99863277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1178:0,83,255:40,0 chr2 99863278 . A . PASS END=99863283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr2 99870681 . C . PASS END=99870723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:66:0,120,1800:0,182,255:40,0 chr2 99900856 . T . PASS END=99900859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 99900860 . A . PASS END=99900860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr2 99900861 . A . PASS END=99900862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 99900863 . C . PASS END=99900863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 99900864 . C . PASS END=99900867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 99900868 . T . PASS END=99900868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:25,0 chr2 99900869 . C . PASS END=99900969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1149:0,87,255:37,0 chr2 99900970 . T . PASS END=99900971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 99900972 . C . PASS END=99900973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 99900974 . C . PASS END=99900974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 99901151 . C . PASS END=99901152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 99901153 . C . PASS END=99901191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,964:0,81,255:31,0 chr2 99901192 . T . PASS END=99901192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 99901193 . G . PASS END=99901198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 99901199 . C . PASS END=99901199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 99901200 . T . PASS END=99901275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1086:0,83,255:33,0 chr2 99901276 . C . PASS END=99901283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:29:0,69,1035:0,77,255:24,0 chr2 99907700 . C . PASS END=99907878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:31:0,80,1177:0,80,255:40,0 chr2 99907879 . G . PASS END=99907884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 99908999 . C . PASS END=99909103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:34:0,93,1272:0,93,255:40,0 chr2 99912091 . C . PASS END=99912133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:38:0,96,1514:0,96,255:40,0 chr2 99923236 . C . PASS END=99923241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:39:0,86,1337:0,86,255:37,0 chr2 99923242 . C . PASS END=99923242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1260:0,62,255:36,0 chr2 99923243 . C . PASS END=99923248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1274:0,81,255:37,0 chr2 99936145 . C . PASS END=99936220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,3:83:99:65:0,120,1800:0,122,255:40,0 chr2 99936221 . A . PASS END=99936262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:71:0,120,1800:0,143,255:40,0 chr2 99938414 . T . PASS END=99938662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:35:0,81,1215:0,103,255:40,1 chr2 99938663 . T . PASS END=99938672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr2 99939062 . T . PASS END=99939068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,216,255:40,0 chr2 99939069 . G . PASS END=99939122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:71:0,120,1800:0,183,255:40,0 chr2 99943998 . C . PASS END=99943998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 99943999 . T . PASS END=99944001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 99944002 . A . PASS END=99944002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 99944003 . T . PASS END=99944007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 99944008 . A . PASS END=99944008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 99944009 . G . PASS END=99944112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:28:0,81,1033:0,84,255:40,0 chr2 99944113 . A . PASS END=99944116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 99949449 . T . PASS END=99949673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,120,1800:0,128,255:40,0 chr2 99954018 . A . PASS END=99954027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr2 99954028 . A . PASS END=99954028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 99954029 . A . PASS END=99954034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 99954035 . A . PASS END=99954035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 99954036 . A . PASS END=99954036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 99954037 . A . PASS END=99954037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,374:0,22,255:12,0 chr2 99954038 . C . PASS END=99954041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 99954042 . A . PASS END=99954042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 99954043 . G . PASS END=99954050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 99954051 . A . LowGQ END=99954051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:10,0 chr2 99954052 . G . PASS END=99954052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 99976699 . C . PASS END=99976824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:35:0,102,1530:0,105,255:40,2 chr2 99976928 . T . PASS END=99977012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:66:0,120,1800:0,165,255:40,0 chr2 99977611 . C . PASS END=99978283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:37:0,99,1485:0,110,255:40,3 chr2 99980108 . A . PASS END=99980325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:98:40:0,98,1397:0,98,255:40,0 chr2 99980734 . G . PASS END=99980884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:61:0,120,1800:0,167,255:40,2 chr2 99984956 . G . PASS END=99985054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:73:0,120,1800:0,200,255:40,0 chr2 99985855 . T . PASS END=99985948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:42:0,120,1800:0,126,255:40,0 chr2 99987601 . T . PASS END=99987602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,233,255:40,0 chr2 99988119 . A . PASS END=99988193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:80:40:0,80,1405:0,80,255:40,0 chr2 99992810 . T . PASS END=99992811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 99992812 . G . PASS END=99992813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1115:0,80,255:31,0 chr2 99992814 . A . PASS END=99992814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:34,0 chr2 99992815 . G . PASS END=99992821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1244:0,105,255:38,0 chr2 99992822 . A C, 166.91 PASS DP=40;MQ=249.66;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,17,0:0,23,0:117:205,120,0,1479,120,1479:255,123,0:0,0:1.6691e+02,1.1691e+02,0.0000e+00,4.5000e+02,1.5168e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,8:0,0,19,21 chr2 99992823 . A . PASS END=99992859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:41:0,81,1407:0,81,255:40,1 chr2 99992860 . G . PASS END=99992863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,134,255:40,0 chr2 99992864 . A . PASS END=99992864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,6:69:63:69:0,63,2030:0,63,255:40,0 chr2 99992865 . G . PASS END=99993078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:34:0,90,1350:0,102,255:40,0 chr2 99993079 . A . PASS END=99993079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1045:0,46,255:28,0 chr2 99993080 . A . PASS END=99993084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 99993085 . A . PASS END=99993099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:26,0 chr2 99995482 . A . PASS END=99995512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:30:0,89,947:0,89,255:40,0 chr2 99995513 . A . PASS END=99995513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1272:0,79,255:40,0 chr2 99995514 . C . PASS END=99995516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1568:0,118,255:40,0 chr2 99995517 . C T, 184.98 PASS DP=46;MQ=249.39;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,20,0:0,26,0:135:223,138,0,1736,138,1736:255,138,0:0,0:1.8498e+02,1.3498e+02,0.0000e+00,4.5000e+02,1.6975e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,20:0,0,28,18 chr2 99995518 . G . PASS END=99995554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:47:0,93,1666:0,93,255:40,0 chr2 99995555 . A . PASS END=99995589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,107,1800:0,107,255:40,0 chr2 99995781 . C . PASS END=99995803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:46:0,109,1768:0,109,255:40,0 chr2 99995804 . T C, 224.11 PASS DP=59;MQ=249.87;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,35,0:0,24,0:174:262,177,0,2248,177,2248:255,177,0:0,0:2.2411e+02,1.7411e+02,0.0000e+00,4.5000e+02,2.0888e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,25:0,0,32,27 chr2 99995805 . G . PASS END=99995841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:57:0,120,1800:0,150,255:40,0 chr2 99995842 . C . PASS END=99995891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,127,255:40,0 chr2 99998622 . T . PASS END=99998689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:82:0,120,1800:0,213,255:40,0 chr2 99999243 . T . PASS END=99999383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:84:54:0,84,1260:0,108,255:40,0 chr2 99999384 . G . PASS END=99999384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:78:55:0,78,1170:0,149,255:26,0 chr2 100006181 . A . PASS END=100006312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:46:0,120,1800:0,125,255:40,0 chr2 100006682 . G . PASS END=100006826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:38:0,84,1300:0,84,255:40,0 chr2 100006827 . T . PASS END=100006827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:30,0 chr2 100006828 . T . PASS END=100006832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1260:0,117,255:30,0 chr2 100006833 . A . PASS END=100006837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:65:32:0,65,1125:0,65,255:25,0 chr2 100006838 . G . PASS END=100006838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:24,0 chr2 100006839 . A . PASS END=100006840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,80,255:25,0 chr2 100006841 . G . PASS END=100006843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:28:0,60,900:0,68,255:20,0 chr2 100006844 . C . PASS END=100006844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:19,0 chr2 100006845 . T . PASS END=100006845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,875:0,23,255:16,0 chr2 100006846 . G . PASS END=100006848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:48:26:0,48,720:0,62,255:16,0 chr2 100006849 . A . PASS END=100006849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,840:0,39,255:15,0 chr2 100006850 . G . PASS END=100006850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,831:0,26,255:13,0 chr2 100006851 . C . PASS END=100006861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:33:23:0,33,495:0,42,255:13,0 chr2 100006862 . G . PASS END=100006862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:9,0 chr2 100006863 . A . PASS END=100006864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:30:20:0,30,450:0,44,255:9,0 chr2 100007007 . G . PASS END=100007014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:35:0,91,1160:0,91,255:36,0 chr2 100007015 . T . PASS END=100007015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:34,0 chr2 100007016 . C . PASS END=100007075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:36:0,92,1308:0,92,255:40,0 chr2 100007076 . G . PASS END=100007076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,9:58:10:58:0,10,1385:0,10,255:40,0 chr2 100007077 . A . PASS END=100007077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr2 100007078 . T . PASS END=100007078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,7:58:57:58:0,57,1570:0,57,255:40,0 chr2 100007079 . A . PASS END=100007156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:88:40:0,88,1541:0,88,255:40,0 chr2 100007157 . T . PASS END=100007157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:35,0 chr2 100007158 . T . PASS END=100007168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:37:0,84,1205:0,84,255:36,0 chr2 100009430 . A . PASS END=100009561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:50:0,120,1800:0,150,255:40,0 chr2 100010730 . G . PASS END=100010861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:69:0,120,1800:0,191,255:40,0 chr2 100010972 . T . PASS END=100011048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,193,255:40,0 chr2 100011182 . G . PASS END=100011346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:72:0,120,1800:0,167,255:40,0 chr2 100013223 . G . PASS END=100013223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 100013224 . C . PASS END=100013224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 100013225 . A . PASS END=100013256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1227:0,83,255:40,0 chr2 100013257 . C . PASS END=100013257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1327:0,73,255:38,0 chr2 100013258 . T . PASS END=100013335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:34:0,87,1286:0,93,255:40,0 chr2 100013336 . C . PASS END=100013357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:25:0,72,961:0,75,255:25,0 chr2 100013358 . A . PASS END=100013358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 100013359 . A . PASS END=100013361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 100015211 . T . PASS END=100015372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:43:0,120,1800:0,122,255:40,0 chr2 100015770 . A . PASS END=100015877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,103,1676:0,103,255:40,0 chr2 100017704 . T . PASS END=100017815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,117,1755:0,128,255:40,0 chr2 100018707 . C . PASS END=100018809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,99,1485:0,117,255:40,0 chr2 100019107 . C . PASS END=100019107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 100019108 . T . PASS END=100019108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 100019109 . G . PASS END=100019110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 100019111 . A . PASS END=100019111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:26,0 chr2 100019112 . A . PASS END=100019115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr2 100019116 . T . PASS END=100019116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,945:0,40,255:27,0 chr2 100019117 . A . PASS END=100019126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1058:0,90,255:30,0 chr2 100019127 . T . PASS END=100019129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr2 100019130 . C . PASS END=100019130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 100019131 . T . PASS END=100019131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 100019132 . G . PASS END=100019249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:31:0,83,1194:0,83,255:40,0 chr2 100019250 . G . PASS END=100019250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr2 100019251 . C . PASS END=100019252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 100019253 . G . PASS END=100019263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,962:0,70,255:25,0 chr2 100019352 . C . PASS END=100019352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 100019353 . A . PASS END=100019359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 100019360 . T . PASS END=100019458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1041:0,89,255:40,0 chr2 100019459 . T . PASS END=100019495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,194,255:40,0 chr2 100019496 . A G, 298.90 PASS DP=84;MQ=249.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,84,0:1.000,0.000:84:0,44,0:0,40,0:249:337,252,0,3191,252,3191:255,255,0:0,0:2.9890e+02,2.4890e+02,0.0000e+00,4.5000e+02,2.8367e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,45,39:0,0,35,49 chr2 100019497 . A . PASS END=100019533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,182,255:40,2 chr2 100019534 . C . PASS END=100019567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:62:0,120,1800:0,176,255:40,0 chr2 100019568 . C . PASS END=100019569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 100020158 . C . PASS END=100020165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 100020166 . C . PASS END=100020166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,568:0,15,255:17,0 chr2 100020167 . T . PASS END=100020173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 100020174 . C . PASS END=100020239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,861:0,63,255:26,0 chr2 100020240 . A . PASS END=100020244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 100020245 . C . PASS END=100020267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 100020268 . T . PASS END=100020278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:17,0 chr2 100020907 . C . PASS END=100020909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1140:0,93,255:31,0 chr2 100020910 . T . PASS END=100020910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 100020911 . G . PASS END=100020912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 100020913 . A . PASS END=100020914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 100020915 . A . PASS END=100020923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1101:0,80,255:32,0 chr2 100020924 . G . PASS END=100020924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 100020925 . G . PASS END=100020928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:31,0 chr2 100020929 . A . PASS END=100020929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1119:0,68,255:29,0 chr2 100020930 . T . PASS END=100020932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1208:0,83,255:30,0 chr2 100020933 . A . PASS END=100020933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr2 100020934 . A . PASS END=100021014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:34:0,88,1189:0,88,255:40,0 chr2 100021015 . T . PASS END=100021015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:36,0 chr2 100021016 . G . PASS END=100021033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:41:0,84,1367:0,84,255:38,0 chr2 100021034 . G . PASS END=100021034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:35,0 chr2 100021035 . G . PASS END=100021046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:37:0,94,1175:0,94,255:37,0 chr2 100021047 . T . PASS END=100021047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1264:0,67,255:36,0 chr2 100021048 . G . PASS END=100021077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:35:0,81,1215:0,84,255:38,0 chr2 100021078 . A . PASS END=100021094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,914:0,62,255:24,0 chr2 100021095 . G . PASS END=100021097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 100021098 . C . PASS END=100021107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr2 100021108 . A . PASS END=100021113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:18,0 chr2 100021114 . A . PASS END=100021120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 100021121 . T . PASS END=100021122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 100021123 . T . PASS END=100021126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 100021127 . A . PASS END=100021127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,720:0,19,255:19,0 chr2 100021128 . C . PASS END=100021128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 100021129 . A . PASS END=100021129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 100021130 . G . PASS END=100021132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 100021133 . T . PASS END=100021133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 100021134 . G . PASS END=100021140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 100022372 . C . PASS END=100022380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 100022381 . T . PASS END=100022395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:26,0 chr2 100022396 . A . PASS END=100022567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:27:0,80,942:0,80,255:40,0 chr2 100022568 . A . PASS END=100022568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:26,0 chr2 100022787 . C . PASS END=100022809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,100,1344:0,100,255:40,0 chr2 100022810 . G . PASS END=100022941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1186:0,83,255:40,0 chr2 100022942 . T . PASS END=100022952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr2 100024491 . C . PASS END=100024593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:66:0,120,1800:0,186,255:40,0 chr2 100027157 . C . PASS END=100027188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1094:0,80,255:31,0 chr2 100027189 . A . PASS END=100027268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:32:0,90,1008:0,93,255:40,0 chr2 100027269 . C . PASS END=100027270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:34,1 chr2 100027271 . T . PASS END=100027283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:35:0,88,1164:0,88,255:35,0 chr2 100027284 . G . PASS END=100027284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:30,0 chr2 100027285 . A . PASS END=100027293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1164:0,88,255:31,0 chr2 100027294 . T . PASS END=100027294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 100027295 . G . PASS END=100027303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1125:0,80,255:28,0 chr2 100027304 . A . PASS END=100027304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 100027305 . G . PASS END=100027307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 100027308 . G . PASS END=100027321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,917:0,67,255:26,0 chr2 100027322 . T . PASS END=100027323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,796:0,42,255:22,0 chr2 100027324 . T . PASS END=100027327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 100027328 . G . PASS END=100027328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:20,0 chr2 100027329 . G . PASS END=100027329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 100029193 . C . PASS END=100029193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr2 100029194 . T . PASS END=100029195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1225:0,99,255:38,0 chr2 100029196 . A . PASS END=100029196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,0 chr2 100029197 . G . PASS END=100029199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1451:0,114,255:40,0 chr2 100029200 . A . PASS END=100029200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1394:0,73,255:38,0 chr2 100029201 . A . PASS END=100029413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:41:0,92,1567:0,92,255:40,0 chr2 100035290 . C . PASS END=100035315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,101,1768:0,101,255:40,0 chr2 100035316 . C . PASS END=100035316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1798:0,76,255:40,0 chr2 100035317 . T . PASS END=100035333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:51:0,84,1709:0,84,255:40,0 chr2 100035334 . T . PASS END=100035334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:74:54:0,74,1697:0,74,255:40,0 chr2 100035335 . C . PASS END=100035341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:80:53:0,80,1800:0,80,255:40,2 chr2 100035342 . T . PASS END=100035342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:41:61:0,41,1670:0,41,255:40,2 chr2 100035343 . T . PASS END=100035409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:87:39:0,87,1305:0,99,255:40,0 chr2 100037961 . C . PASS END=100038114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:37:0,88,1440:0,88,255:40,0 chr2 100038115 . G . PASS END=100038115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 100040614 . C . PASS END=100040742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:56:0,120,1800:0,154,255:40,0 chr2 100041235 . C . PASS END=100041240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,988:0,84,255:29,0 chr2 100041241 . A . PASS END=100041242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 100041243 . T . PASS END=100041297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1139:0,80,255:36,0 chr2 100041298 . A . PASS END=100041298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1126:0,75,255:30,0 chr2 100041299 . C . PASS END=100041325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1233:0,84,255:35,0 chr2 100041326 . C . PASS END=100041342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,71,255:25,0 chr2 100041343 . T . PASS END=100041344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,808:0,41,255:22,0 chr2 100041345 . C . PASS END=100041360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,839:0,66,255:23,0 chr2 100041361 . C . PASS END=100041361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 100046302 . C . PASS END=100046410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,126,255:40,0 chr2 100050794 . C . PASS END=100050815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1197:0,99,255:36,0 chr2 100050816 . A . PASS END=100050816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:34,0 chr2 100050817 . T . PASS END=100050885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1288:0,84,255:40,0 chr2 100050886 . T . PASS END=100050891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:34:0,78,1170:0,102,255:26,0 chr2 100050892 . G . PASS END=100050900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1169:0,80,255:28,0 chr2 100050901 . A . PASS END=100050910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:25,0 chr2 100052296 . C . PASS END=100052403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,121,255:40,0 chr2 100055063 . C . PASS END=100055102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:42:0,110,1512:0,110,255:40,1 chr2 100055103 . T . PASS END=100055103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:59:49:0,59,1543:0,59,255:40,0 chr2 100055104 . T . PASS END=100055204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:43:0,92,1596:0,92,255:40,0 chr2 100055205 . T . PASS END=100055205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1533:0,69,255:39,0 chr2 100055206 . C . PASS END=100055465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1215:0,86,255:40,0 chr2 100055466 . A . PASS END=100055468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 100055469 . A . PASS END=100055481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:29,0 chr2 100055482 . T . PASS END=100055484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 100055485 . G . PASS END=100055493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1177:0,80,255:28,0 chr2 100055494 . T . PASS END=100055494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 100055495 . C . PASS END=100055500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 100055501 . G . PASS END=100055505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 100055506 . A G, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,17,0:0,12,0:84:172,87,0,1107,87,1107:255,87,0:0,0:1.3428e+02,8.4276e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,19:0,0,16,13 chr2 100055507 . A . PASS END=100055517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 100055518 . A . PASS END=100055519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 100055520 . C . PASS END=100055532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,74,255:26,0 chr2 100055533 . C . PASS END=100055538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 100055539 . A . PASS END=100055539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 100055540 . C . PASS END=100055543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 100055544 . G . PASS END=100055545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 100055546 . G . PASS END=100055546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:28,0 chr2 100055547 . C . PASS END=100055547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 100055548 . A . PASS END=100055548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 100055549 . C . PASS END=100055549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 100055550 . C . PASS END=100055550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 100055551 . A . PASS END=100055559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr2 100055560 . T . PASS END=100055564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr2 100055565 . C . PASS END=100055768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1225:0,89,255:40,0 chr2 100055769 . A . PASS END=100055769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:34,0 chr2 100055770 . T . PASS END=100055772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1183:0,94,255:35,0 chr2 100058779 . A . PASS END=100058779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1230:0,94,255:36,0 chr2 100058780 . C . PASS END=100058780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1210:0,50,255:35,0 chr2 100058781 . C . PASS END=100058782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1268:0,97,255:37,0 chr2 100058783 . T . PASS END=100058783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1175:0,58,255:36,0 chr2 100058784 . G . PASS END=100058785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1307:0,75,255:37,0 chr2 100058786 . T . PASS END=100058788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:39:0,90,1350:0,90,255:39,0 chr2 100058789 . T . PASS END=100058790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1466:0,107,255:39,0 chr2 100058791 . A . PASS END=100058792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:41:0,49,1296:0,49,255:39,0 chr2 100058793 . C . PASS END=100058793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:24:43:0,24,1300:0,24,255:36,0 chr2 100058794 . T . PASS END=100058800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1390:0,87,255:40,0 chr2 100058801 . C . PASS END=100058801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1455:0,44,255:39,0 chr2 100058802 . T . PASS END=100058802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 100058803 . A . LowGQ END=100058803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,7:44:0:44:0,0,1228:28,0,255:37,0 chr2 100058804 . T . PASS END=100058804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,115,1513:0,115,255:40,0 chr2 100058805 . A . PASS END=100058805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1341:0,66,255:39,0 chr2 100058806 . T . PASS END=100058808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,108,1621:0,108,255:40,0 chr2 100058809 . C . PASS END=100058809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:52:46:0,52,1490:0,52,255:40,0 chr2 100058810 . T . PASS END=100058832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:91:44:0,91,1561:0,91,255:40,0 chr2 100058833 . G . PASS END=100058869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,104,1800:0,104,255:40,0 chr2 100058870 . C T, 197.02 PASS DP=50;MQ=249.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,30,0:0,20,0:147:235,150,0,1893,150,1893:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,27:0,0,21,29 chr2 100058871 . A . PASS END=100058898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:36:0,81,1215:0,108,255:40,0 chr2 100058899 . G . PASS END=100058901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:32:0,78,1170:0,96,255:26,0 chr2 100058902 . A . PASS END=100058904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 100058905 . T . PASS END=100058907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:22,0 chr2 100058908 . G . PASS END=100058911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:22,0 chr2 100058912 . G . PASS END=100058931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,49,255:19,0 chr2 100065798 . C . PASS END=100065966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:43:0,114,1710:0,129,255:40,2 chr2 100067935 . T . PASS END=100067963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,167,255:40,0 chr2 100078958 . C . PASS END=100079084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,105,1575:0,130,255:40,0 chr2 100081384 . C . PASS END=100081418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,165,255:40,0 chr2 100081419 . T . PASS END=100081447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:62:0,120,1800:0,158,255:40,0 chr2 100096150 . T . PASS END=100096154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1235:0,96,255:33,0 chr2 100096155 . T . PASS END=100096155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:31,0 chr2 100096156 . G . PASS END=100096194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:33:0,92,1243:0,92,255:40,0 chr2 100096195 . A . PASS END=100096198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:52:0,84,1260:0,156,255:28,0 chr2 100096199 . A . PASS END=100096203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:63:57:0,63,945:0,144,255:26,0 chr2 100096204 . A . PASS END=100096209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:42:60:0,42,630:0,111,255:17,0 chr2 100096210 . C . PASS END=100096213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:30:59:0,30,450:0,178,255:11,0 chr2 100096214 . G . PASS END=100096216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:21:60:0,21,315:0,164,255:9,0 chr2 100096217 . G . PASS END=100096230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:15:61:0,15,225:0,165,255:6,0 chr2 100096231 . A . LowGQ END=100096240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:65,0:65:0:64:0,0,0:0,176,255:2,0 chr2 100096241 . AAATAAT A, 217.96 PASS DP=64;MQ=250.00;MQRankSum=1.677;ReadPosRankSum=1.677;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,62,0:0.984,0.000:63:1,36,0:0,26,0:168:232,171,0,1455,185,1470:255,57,0:0,90:2.1796e+02,1.6796e+02,0.0000e+00,4.5000e+02,2.1724e+02,4.5000e+02:0.00,11.00,14.00,34.77,45.77,37.77:0,1,39,23:0,1,31,31 chr2 100096242 . A . LowGQ END=100096248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:8,88:96:0:65:0,0,0:255,0,0:40,90 chr2 100096249 . A . PASS END=100096260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,179,255:40,0 chr2 100096261 . A . PASS END=100096261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:33:68:0,33,2194:0,33,255:40,1 chr2 100096262 . T . PASS END=100096262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,5:69:62:69:0,62,2227:0,62,255:40,1 chr2 100096263 . A . PASS END=100096294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:68:0,118,1800:0,118,255:40,1 chr2 100096295 . A . PASS END=100096448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:87:37:0,87,1305:0,97,255:40,0 chr2 100098622 . C . PASS END=100098641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:84:0,120,1800:0,247,255:40,0 chr2 100167936 . C . PASS END=100168057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:35:0,96,1327:0,96,255:40,0 chr2 100170773 . C . PASS END=100170796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 100170797 . C . PASS END=100170797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 100170798 . G . PASS END=100170801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr2 100170802 . A . PASS END=100170802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 100170803 . T . PASS END=100170803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 100170804 . C . PASS END=100170808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 100170809 . A . PASS END=100170809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 100170810 . G . PASS END=100170826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,798:0,63,255:25,0 chr2 100170827 . G . PASS END=100170828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 100170829 . A . PASS END=100170829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr2 100170830 . T . PASS END=100170839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 100170840 . G . PASS END=100170840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 100170841 . A . PASS END=100170915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1111:0,90,255:34,0 chr2 100170916 . G . PASS END=100170916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:29,0 chr2 100170917 . C . PASS END=100170937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1062:0,90,255:31,0 chr2 100170938 . A . PASS END=100170938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1042:0,65,255:27,0 chr2 100170939 . C . PASS END=100170948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 100170949 . C . PASS END=100170956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 100170957 . A . PASS END=100170984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:20:0,44,690:0,44,255:19,0 chr2 100170985 . G . PASS END=100170995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 100170996 . C . PASS END=100170996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 100171145 . T . PASS END=100171194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1260:0,90,255:38,0 chr2 100175337 . C . PASS END=100175430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:39:0,101,1377:0,101,255:40,0 chr2 100176827 . C . PASS END=100176898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,117,1755:0,148,255:40,0 chr2 100181949 . C . PASS END=100182085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:41:0,107,1466:0,107,255:40,0 chr2 100185314 . C . PASS END=100185377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,153,255:40,0 chr2 100194789 . A . PASS END=100194813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,778:0,63,255:23,0 chr2 100194814 . T . PASS END=100194814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:23,0 chr2 100194815 . C . PASS END=100194818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 100194819 . C . PASS END=100194819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 100194820 . A . PASS END=100194820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 100194821 . G . PASS END=100194823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 100194824 . C . PASS END=100194824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 100194825 . C . PASS END=100194833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 100194834 . T . PASS END=100194840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:29:0,73,944:0,73,255:26,0 chr2 100194841 . C . PASS END=100194853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 100194854 . C . PASS END=100194855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 100194856 . T . PASS END=100194864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:29,0 chr2 100194865 . G . PASS END=100194865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 100194866 . C . PASS END=100194866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 100194867 . C . PASS END=100194867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 100194868 . G . PASS END=100194868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr2 100194869 . T . PASS END=100194892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,937:0,62,255:26,0 chr2 100194893 . A . PASS END=100194893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr2 100194894 . G . PASS END=100194896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,853:0,66,255:22,0 chr2 100194897 . T . PASS END=100194913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,660:0,57,255:19,0 chr2 100199260 . C . PASS END=100199264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr2 100199265 . G . PASS END=100199333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:31:0,85,1045:0,85,255:40,0 chr2 100199334 . A . PASS END=100199334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:40,0 chr2 100199335 . A . PASS END=100199415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:35:0,87,1205:0,87,255:40,0 chr2 100199416 . G . PASS END=100199416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:30,0 chr2 100199417 . G . PASS END=100199461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:32,0 chr2 100203616 . C . PASS END=100203740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:43:0,96,1435:0,99,255:40,0 chr2 100209657 . C . PASS END=100209657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 100209658 . T . PASS END=100209658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 100209659 . T . PASS END=100209659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:23,0 chr2 100209660 . G . PASS END=100209661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 100209662 . G . PASS END=100209663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 100209664 . T . PASS END=100209664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 100209665 . T . PASS END=100209665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 100209666 . C . PASS END=100209667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,823:0,41,255:24,0 chr2 100209668 . T . PASS END=100209668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:24,0 chr2 100209669 . C . PASS END=100209669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 100209670 . T . PASS END=100209670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:22,0 chr2 100209671 . T . PASS END=100209671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 100209672 . G . PASS END=100209672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 100209673 . G . PASS END=100209675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 100209676 . T . PASS END=100209676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 100209677 . T . PASS END=100209677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr2 100209678 . T . PASS END=100209678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 100209679 . G . PASS END=100209680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:25,0 chr2 100209681 . C . PASS END=100209681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr2 100209682 . A . PASS END=100209683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 100209684 . A . PASS END=100209684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,829:0,36,255:24,0 chr2 100209685 . G . PASS END=100209685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,836:0,20,255:23,0 chr2 100209686 . C . PASS END=100209686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 100209687 . C . PASS END=100209687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 100209688 . T . PASS END=100209688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr2 100209689 . T . PASS END=100209692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,937:0,62,255:25,0 chr2 100209693 . T . PASS END=100209693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:25,0 chr2 100209694 . G . PASS END=100209696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:26,0 chr2 100209697 . G . PASS END=100209697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr2 100209698 . G . PASS END=100209698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,945:0,62,255:25,0 chr2 100209699 . T . PASS END=100209699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:24,0 chr2 100209700 . G . PASS END=100209703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,1030:0,68,255:27,0 chr2 100209704 . C . PASS END=100209704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 100209705 . C . PASS END=100209705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 100209706 . G . PASS END=100209707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 100209708 . G . PASS END=100209708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:26,0 chr2 100209709 . G . PASS END=100209709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 100209710 . T . PASS END=100209710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,962:0,35,255:26,0 chr2 100209711 . G . PASS END=100209712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 100209713 . G . PASS END=100209723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 100209724 . G . PASS END=100209731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,986:0,67,255:26,0 chr2 100209732 . A . PASS END=100209732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:22,0 chr2 100209733 . G . PASS END=100209740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:24,0 chr2 100209741 . G . PASS END=100209741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 100209742 . G . PASS END=100209750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 100209751 . G . PASS END=100209755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 100209756 . C . PASS END=100209758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 100209759 . T . PASS END=100209759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,743:0,27,255:19,0 chr2 100209760 . A . PASS END=100209763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr2 100209764 . C . PASS END=100209764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:20,0 chr2 100209765 . T . PASS END=100209771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr2 100209772 . T . PASS END=100209772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 100209773 . G . PASS END=100209782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 100209783 . T . PASS END=100209783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr2 100209784 . T . PASS END=100209790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 100209791 . T . PASS END=100209791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,808:0,9,255:19,0 chr2 100209792 . C . PASS END=100209796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 100209797 . A . PASS END=100209797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:20,0 chr2 100209798 . C . PASS END=100209798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 100209799 . A . PASS END=100209799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr2 100209800 . G . PASS END=100209806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 100209807 . C . PASS END=100209809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr2 100209810 . G . PASS END=100209816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 100209817 . T . PASS END=100209817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 100209818 . T . PASS END=100209827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 100209828 . A . PASS END=100209828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:21,0 chr2 100209829 . G . PASS END=100209832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr2 100209833 . T . PASS END=100209833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 100209834 . G . PASS END=100209865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,823:0,69,255:24,0 chr2 100209866 . G . PASS END=100209866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,613:0,19,255:20,0 chr2 100209867 . T . PASS END=100209878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 100209879 . A . PASS END=100209879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 100209880 . A . PASS END=100209886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 100209887 . C . PASS END=100209901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:17:0,48,629:0,50,255:20,0 chr2 100209902 . G . PASS END=100209902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 100209903 . C . PASS END=100209955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,518:0,51,255:18,0 chr2 100209956 . C . PASS END=100209967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr2 100209968 . G . PASS END=100209989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 100209990 . G . PASS END=100209990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 100209991 . G . PASS END=100210011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 100210012 . T . PASS END=100210016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 100210017 . G . PASS END=100210017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 100210018 . G . PASS END=100210036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr2 100210037 . C . PASS END=100210037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 100210038 . G . PASS END=100210060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 100210061 . A . PASS END=100210061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 100210062 . C . PASS END=100210068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 100210069 . T . PASS END=100210069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr2 100210070 . G . PASS END=100210078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 100210079 . C . PASS END=100210095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 100210096 . G . PASS END=100210125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:12,0 chr2 100210126 . A . LowGQ END=100210126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:11,0 chr2 100210127 . T . PASS END=100210149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,398:0,36,255:13,0 chr2 100210150 . A . PASS END=100210150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 100210151 . T . PASS END=100210161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 100210162 . C . PASS END=100210163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 100210164 . C . PASS END=100210164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr2 100210165 . C . PASS END=100210169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 100210170 . G . PASS END=100210179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 100210180 . T . PASS END=100210195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr2 100210196 . A . PASS END=100210197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 100210198 . C . PASS END=100210203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr2 100210204 . T . PASS END=100210204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 100210205 . C . PASS END=100210240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,660:0,54,255:18,0 chr2 100210241 . T . PASS END=100210241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 100210242 . G . PASS END=100210243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 100210244 . T . PASS END=100210244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr2 100210245 . T . PASS END=100210245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 100210246 . T . PASS END=100210246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 100210247 . T . PASS END=100210252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 100210253 . G . PASS END=100210253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 100210254 . C . PASS END=100210263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:17,0 chr2 100210264 . A . PASS END=100210264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 100210265 . C . PASS END=100210266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 100210267 . A . PASS END=100210267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr2 100210268 . C . PASS END=100210273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,38,255:12,0 chr2 100210274 . T . PASS END=100210287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:15:0,27,405:0,45,255:9,0 chr2 100210288 . T . PASS END=100210315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:21:15:0,21,315:0,35,255:7,0 chr2 100210316 . G . PASS END=100210322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:12:18:0,12,180:0,37,255:6,0 chr2 100210323 . G . LowGQ END=100210333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:19,0:19:0:19:0,0,0:0,40,255:2,1 chr2 100210334 . CGGCTGA CGCTGA,C, 102.42 PASS DP=20;MQ=246.72;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,1,0:0.950,0.050,0.000:20:0,8,1,0:0,11,0,0:52:135,55,0,695,54,131,795,795,795,795:255,0,203:0,21:1.0242e+02,5.2415e+01,2.4851e-05,4.5000e+02,8.1146e+01,1.3115e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,30.00,33.01,30.00,60.00,33.01,34.77,64.77,64.77,37.78:0,0,5,15:0,0,12,8 chr2 100210335 . G . LowGQ END=100210336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,28:28:0:28:0,0,0:255,0,0:0,21 chr2 100210337 . CTGAGG C, 101.20 PASS DP=20;MQ=246.72;MQRankSum=1.369;ReadPosRankSum=-1.552;FractionInformativeReads=0.950;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,18,0:0.947,0.000:19:1,7,0:0,11,0:51:134,54,0,234,234,234:255,45,0:1,21:1.0120e+02,5.1204e+01,3.2875e-05,2.3597e+02,2.6597e+02,2.3898e+02:0.00,30.00,33.01,34.77,64.77,37.78:0,1,5,13:0,1,12,6 chr2 100210338 . T . LowGQ END=100210345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,17:17:0:17:0,0,0:26,0,0:15,21 chr2 100210346 . T . PASS END=100210353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 100210354 . C . PASS END=100210354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr2 100210355 . G . PASS END=100210357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 100210358 . T . PASS END=100210359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,465:0,25,255:14,0 chr2 100210360 . G . PASS END=100210382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:17,0 chr2 100210383 . C . PASS END=100210383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 100210384 . C . PASS END=100210386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 100210387 . G . PASS END=100210387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 100210388 . C . PASS END=100210388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 100210389 . A . PASS END=100210395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr2 100210396 . G . PASS END=100210396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 100210397 . G . PASS END=100210400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 100210401 . G . PASS END=100210401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 100210402 . T . PASS END=100210440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:18,0 chr2 100210441 . G . PASS END=100210441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:16,0 chr2 100210442 . C . PASS END=100210450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr2 100210451 . C . PASS END=100210463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:22,0 chr2 100210464 . G . PASS END=100210464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 100210465 . G . PASS END=100210470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 100210471 . G . PASS END=100210471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 100210472 . G . PASS END=100210502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:26,0 chr2 100210503 . A . PASS END=100210503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,937:0,42,255:26,2 chr2 100210504 . G . PASS END=100210504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,961:0,18,255:26,2 chr2 100210505 . G . PASS END=100210505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:27,0 chr2 100210506 . G . PASS END=100210513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 100210514 . T . PASS END=100210514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 100210515 . G . PASS END=100210526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1050:0,90,255:30,0 chr2 100210527 . C . PASS END=100210527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 100210528 . C . PASS END=100210536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 100210537 . T . PASS END=100210537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 100210538 . C . PASS END=100210556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1125:0,80,255:31,0 chr2 100210557 . C . PASS END=100210557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1049:0,66,255:28,0 chr2 100210558 . T . PASS END=100210617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1225:0,86,255:40,0 chr2 100210618 . T . PASS END=100210618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1313:0,79,255:37,0 chr2 100210619 . C . PASS END=100210721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:41:0,96,1371:0,96,255:40,0 chr2 100210722 . C . PASS END=100210722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:37,0 chr2 100210723 . T . PASS END=100210739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1260:0,96,255:39,0 chr2 100210740 . T . PASS END=100210751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,77,255:24,0 chr2 100217897 . C . PASS END=100217910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr2 100217911 . A . PASS END=100217911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 100217912 . G . PASS END=100217925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,590:0,41,255:19,0 chr2 100217926 . T . PASS END=100217942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:26,0 chr2 100217943 . G . PASS END=100217998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr2 100217999 . G . PASS END=100217999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 100218000 . C . PASS END=100218000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 100218001 . T . PASS END=100218024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,947:0,75,255:26,0 chr2 100218025 . T . PASS END=100218025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,836:0,20,255:23,0 chr2 100218026 . G . PASS END=100218059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr2 100218060 . C . PASS END=100218076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 100218077 . C . PASS END=100218080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,38,255:14,0 chr2 100218081 . G . PASS END=100218083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr2 100247465 . C . PASS END=100247477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 100266088 . C . PASS END=100266128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:37:0,95,1327:0,95,255:40,0 chr2 100288853 . C . PASS END=100288893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1179:0,84,255:40,0 chr2 100288894 . C . PASS END=100288912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,114,1710:0,123,255:40,0 chr2 100289000 . C . PASS END=100289051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,104,1423:0,104,255:40,0 chr2 100323566 . C . PASS END=100323663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:70:0,120,1800:0,179,255:40,0 chr2 100343539 . G . PASS END=100343556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,140,255:40,0 chr2 100343557 . C T, 251.66 PASS DP=68;MQ=249.69;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,39,0:0,29,0:202:289,205,0,2628,205,2628:255,205,0:0,0:2.5166e+02,2.0166e+02,0.0000e+00,4.5000e+02,2.3643e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,32:0,0,35,33 chr2 100343558 . T . PASS END=100343590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,178,255:40,0 chr2 100360566 . T . PASS END=100360602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:84:0,120,1800:0,217,255:40,0 chr2 100368683 . C . PASS END=100368763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,150,255:40,0 chr2 100394248 . T . PASS END=100394260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:18,0 chr2 100394261 . C . PASS END=100394261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr2 100394262 . A . PASS END=100394281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,629:0,54,255:18,0 chr2 100394282 . G . PASS END=100394303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,678:0,60,255:21,0 chr2 100394304 . A . PASS END=100394346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,46,255:19,0 chr2 100394347 . C . PASS END=100394349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr2 100394350 . A . PASS END=100394352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:12,0 chr2 100394353 . C . PASS END=100394356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,495:0,31,255:12,0 chr2 100394357 . G . PASS END=100394358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:6:15:0,6,451:0,6,255:12,0 chr2 100394359 . T . PASS END=100394359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 100394360 . T . PASS END=100394360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 100394361 . G . LowGQ END=100394362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,418:0,0,255:12,0 chr2 100394363 . A . PASS END=100394363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 100394364 . C . LowGQ END=100394368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,310:0,0,255:10,0 chr2 100394369 . T . PASS END=100394369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 100394370 . T . LowGQ END=100394378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,310:0,0,255:10,0 chr2 100394379 . A . PASS END=100394379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 100394380 . G . LowGQ END=100394381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,324:19,0,255:6,0 chr2 100394382 . C . PASS END=100394382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:18:12:0,18,270:0,19,255:5,0 chr2 100394383 . C . LowGQ END=100394385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:10:0,0,233:0,0,255:5,0 chr2 100394386 . G . PASS END=100394387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,270:0,14,255:6,0 chr2 100394388 . G . LowGQ END=100394391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:9:0,0,172:3,0,222:5,0 chr2 100453939 . C . PASS END=100453947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:89:0,120,1800:0,212,255:40,0 chr2 100453948 . T . PASS END=100453986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:89:0,120,1800:0,244,255:40,0 chr2 100623094 . C . PASS END=100623101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,504:0,39,255:13,0 chr2 100623102 . G . PASS END=100623127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,470:0,42,255:15,0 chr2 100623128 . T . PASS END=100623141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,474:0,39,255:13,0 chr2 100623142 . G . PASS END=100623169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr2 100623170 . C . PASS END=100623172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 100623173 . C . PASS END=100623174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 100623175 . G . PASS END=100623181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 100623182 . G . PASS END=100623182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 100623183 . T . PASS END=100623190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 100623191 . A . PASS END=100623192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 100623193 . G . PASS END=100623212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,807:0,69,255:24,0 chr2 100623213 . T . PASS END=100623213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 100623214 . C . PASS END=100623215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 100623216 . G . PASS END=100623219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 100623220 . A . PASS END=100623223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1063:0,74,255:26,0 chr2 100623224 . G . PASS END=100623226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 100623227 . T . PASS END=100623230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 100623231 . C . PASS END=100623231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 100623232 . A . PASS END=100623232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 100623233 . G . PASS END=100623240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:30,0 chr2 100623241 . A . PASS END=100623241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 100623242 . T . PASS END=100623329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1210:0,86,255:35,0 chr2 100623330 . C . PASS END=100623330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:31,0 chr2 100623331 . A . PASS END=100623356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:32,0 chr2 100623357 . C . PASS END=100623357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:25,0 chr2 100623358 . C . PASS END=100623358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 100623359 . G . PASS END=100623373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 100623374 . C . PASS END=100623374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr2 100623375 . T . PASS END=100623378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,894:0,70,255:26,0 chr2 100623379 . C . PASS END=100623379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:24,0 chr2 100623380 . T . PASS END=100623393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,65,255:24,0 chr2 100623394 . C . PASS END=100623395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 100623396 . C . PASS END=100623398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr2 100623399 . C . PASS END=100623401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 100623402 . C . PASS END=100623408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 100623409 . C . PASS END=100623454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:19,0 chr2 100623455 . A . PASS END=100623464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:11,0 chr2 100623465 . G . PASS END=100623479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,288:0,24,255:9,0 chr2 100623610 . T . PASS END=100623626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,870:0,62,255:26,0 chr2 100623627 . T . PASS END=100623628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 100623629 . A . PASS END=100623629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 100623630 . G . PASS END=100623922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:31:0,83,1224:0,83,255:40,0 chr2 100625274 . C . PASS END=100625394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:52:0,120,1800:0,156,255:40,0 chr2 100627959 . C . PASS END=100628033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,99,1485:0,120,255:40,0 chr2 100720864 . C . PASS END=100720864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 100720865 . A . LowGQ END=100720865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr2 100720866 . C . PASS END=100720910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr2 100720911 . G . PASS END=100720956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr2 100720957 . G . PASS END=100720957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 100720958 . C . PASS END=100720959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 100720960 . G . PASS END=100720971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:11:0,30,450:0,31,255:11,0 chr2 100720972 . G . PASS END=100720972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 100720973 . C . PASS END=100720980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr2 100721966 . C . PASS END=100721966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 100721967 . G . PASS END=100721967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,445:0,14,255:14,0 chr2 100721968 . G . PASS END=100721969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,523:0,45,255:16,0 chr2 100721970 . A . PASS END=100721970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 100721971 . A . PASS END=100721980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:18,0 chr2 100721981 . A . PASS END=100721981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:17,0 chr2 100721982 . C . PASS END=100721982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 100721983 . T . PASS END=100721983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 100721984 . G . PASS END=100721987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 100721988 . T . PASS END=100721988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:17,0 chr2 100721989 . C . PASS END=100721998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,668:0,43,255:19,0 chr2 100721999 . A . PASS END=100721999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,619:0,27,255:17,0 chr2 100722000 . C . PASS END=100722020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:18,0 chr2 100722021 . C . PASS END=100722021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 100722022 . C . PASS END=100722030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 100722031 . A . PASS END=100722031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 100722032 . A . PASS END=100722035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 100722036 . A . PASS END=100722036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:14,0 chr2 100722037 . G . PASS END=100722043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 100722044 . A . PASS END=100722044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 100722045 . G . PASS END=100722045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 100722134 . T . PASS END=100722143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 100722144 . A . PASS END=100722145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 100722242 . C . PASS END=100722312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,817:0,61,255:25,0 chr2 100722313 . G . PASS END=100722317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 100722318 . G . PASS END=100722318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 100722319 . C . PASS END=100722320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 100722321 . T . PASS END=100722321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,990:0,68,255:26,0 chr2 100722322 . C . PASS END=100722327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 100722328 . G . PASS END=100722328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 100722329 . C . PASS END=100722331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 100722332 . A . PASS END=100722332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,848:0,51,255:25,0 chr2 100722333 . C . PASS END=100722354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:29,0 chr2 100722355 . A . PASS END=100722356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 100722357 . A . PASS END=100722375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1194:0,83,255:30,0 chr2 100722376 . T . PASS END=100722376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:27,0 chr2 100722377 . C . PASS END=100722380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 100722381 . C . PASS END=100722381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 100722382 . C . PASS END=100722382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 100722383 . T . PASS END=100722383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:26,0 chr2 100722384 . T . PASS END=100722385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 100722386 . G . PASS END=100722386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 100722387 . T . PASS END=100722390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 100722391 . T . PASS END=100722391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:27,0 chr2 100722392 . T . PASS END=100722405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 100722406 . A . PASS END=100722406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 100722407 . C . PASS END=100722409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 100722410 . C . PASS END=100722410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 100722411 . T . PASS END=100722414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 100722415 . T . PASS END=100722415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 100722416 . G . PASS END=100722420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 100722421 . T . PASS END=100722421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 100722422 . G . PASS END=100722422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 100722423 . C . PASS END=100722444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1008:0,68,255:26,0 chr2 100722445 . C . PASS END=100722446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 100722447 . A . PASS END=100722450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 100722451 . A . PASS END=100722470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,652:0,44,255:19,0 chr2 100722471 . A . PASS END=100722472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 100722473 . C . PASS END=100722474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 100722475 . G . PASS END=100722475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 100722476 . A . PASS END=100722476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 100722477 . A . PASS END=100722481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:13,0 chr2 100722482 . C . PASS END=100722484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:14,0 chr2 100900760 . T . PASS END=100900764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 100900765 . T . PASS END=100900765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:13,0 chr2 100900766 . A . PASS END=100900785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,545:0,45,255:19,0 chr2 100900786 . C . PASS END=100900790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:22,0 chr2 100900791 . T . PASS END=100900791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 100900792 . C . PASS END=100900815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,890:0,62,255:26,0 chr2 100900816 . T . PASS END=100900823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 100900824 . A . PASS END=100900824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 100900825 . C . PASS END=100900852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1040:0,84,255:29,0 chr2 100900853 . C . PASS END=100900863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 100900864 . A . PASS END=100900876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 100900877 . G . PASS END=100900877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 100900878 . A . PASS END=100900878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 100900879 . T . PASS END=100900883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 100900884 . A . PASS END=100900884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:24,0 chr2 100900885 . G . PASS END=100900924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr2 100900925 . C . PASS END=100900929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:16,0 chr2 100900930 . A . PASS END=100900934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,49,255:13,0 chr2 100900935 . G . PASS END=100900936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:14,0 chr2 100900937 . A . PASS END=100900939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 100900940 . G . PASS END=100900944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:14,0 chr2 100900945 . T . PASS END=100900948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 100900949 . A . PASS END=100900949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 100900950 . T . LowGQ END=100900950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,504:4,0,255:12,0 chr2 100900951 . T . PASS END=100900951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 100900952 . A . PASS END=100900952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr2 100900953 . C . PASS END=100900954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 100903376 . C . PASS END=100903379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,929:0,65,255:26,0 chr2 100903380 . G . PASS END=100903383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:28,0 chr2 100903384 . C . PASS END=100903384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 100903385 . A . PASS END=100903387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:31,0 chr2 100903388 . T . PASS END=100903388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr2 100903389 . T . PASS END=100903392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:92:31:0,92,977:0,92,255:31,0 chr2 100903393 . T . PASS END=100903393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr2 100903394 . G . PASS END=100903422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1044:0,80,255:32,0 chr2 100903423 . T . PASS END=100903423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:31,0 chr2 100903424 . T . PASS END=100903438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1156:0,83,255:32,0 chr2 100903439 . A . PASS END=100903439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:29,0 chr2 100903440 . T . PASS END=100903492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:28:0,81,1078:0,84,255:35,0 chr2 100903493 . A . PASS END=100903493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:26,0 chr2 100903494 . G . PASS END=100903498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:28,0 chr2 100903499 . A . PASS END=100903523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 100903524 . A . PASS END=100903524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 100903525 . C . PASS END=100903525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 100906720 . C . PASS END=100906730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 100906731 . C . PASS END=100906731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 100906732 . A . PASS END=100906741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,725:0,63,255:22,0 chr2 100906742 . A . PASS END=100906742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr2 100906743 . T . PASS END=100906744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 100906745 . T . PASS END=100906746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 100906747 . C . PASS END=100906750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 100906751 . G . PASS END=100906837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,950:0,81,255:40,0 chr2 100906838 . G . PASS END=100906838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 100906839 . T . PASS END=100906842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr2 100906843 . C . PASS END=100906859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,902:0,74,255:26,0 chr2 100906860 . G . PASS END=100906860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 100906861 . C . PASS END=100906868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr2 100906869 . C . PASS END=100906882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,765:0,42,255:19,0 chr2 100910691 . C . PASS END=100910723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1194:0,87,255:36,0 chr2 100910724 . C . PASS END=100910724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr2 100910725 . G . PASS END=100910799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,82,255:40,0 chr2 100910800 . C . PASS END=100910813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,77,255:24,0 chr2 100910814 . A . PASS END=100910814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 100910815 . T . PASS END=100910819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 100910820 . C . PASS END=100910838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,50,255:19,0 chr2 100910839 . C . PASS END=100910849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr2 100911894 . T . PASS END=100912015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:61:0,120,1800:0,166,255:40,0 chr2 100915298 . T . PASS END=100915412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:35:0,91,1146:0,91,255:40,0 chr2 100915688 . C . PASS END=100915716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1196:0,83,255:39,0 chr2 100915717 . T . PASS END=100915717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr2 100915718 . A . PASS END=100915780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:32:0,83,1148:0,83,255:39,0 chr2 100915781 . T . PASS END=100915781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr2 100916179 . C . PASS END=100916373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:82:29:0,82,973:0,82,255:40,0 chr2 100916374 . A . PASS END=100916374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:61:47:0,61,1526:0,61,255:39,0 chr2 100916375 . T . PASS END=100916380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:91:46:0,91,1523:0,91,255:40,0 chr2 100917106 . C . PASS END=100917108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1194:0,93,255:33,0 chr2 100917109 . C . PASS END=100917109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:32,0 chr2 100917110 . G . PASS END=100917121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:35,0 chr2 100917122 . T . PASS END=100917122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:35,0 chr2 100917123 . C . PASS END=100917127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1286:0,92,255:36,0 chr2 100917128 . T . PASS END=100917128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:35,0 chr2 100917129 . C . PASS END=100917236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:37:0,81,1215:0,81,255:40,0 chr2 100917237 . C . PASS END=100917241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:34:0,75,1125:0,92,255:26,0 chr2 100917242 . C . PASS END=100917245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 100917246 . T . PASS END=100917249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr2 100919383 . C . PASS END=100919505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:97:44:0,97,1645:0,97,255:40,0 chr2 100925569 . C . PASS END=100925687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:31:0,88,1133:0,88,255:40,0 chr2 100937877 . C . PASS END=100937896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,466:0,36,255:13,0 chr2 100937897 . C . PASS END=100937904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 100937905 . C . PASS END=100937905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 100937906 . A . PASS END=100937907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 100937908 . C . PASS END=100937922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 100937923 . C . PASS END=100937926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 100937927 . T . PASS END=100937932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 100937933 . T . PASS END=100937933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 100937934 . G . PASS END=100937938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,496:0,39,255:13,0 chr2 100937939 . C . PASS END=100937939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 100937940 . T . PASS END=100937968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr2 100937969 . C . PASS END=100937969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 100937970 . G . PASS END=100938000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr2 100938001 . G . LowGQ END=100938001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,357:8,0,255:10,0 chr2 100938002 . C . PASS END=100938016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 100938017 . T . PASS END=100938017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 100938018 . T . PASS END=100938032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 100938033 . G . LowGQ END=100938033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,379:8,0,255:11,0 chr2 100938034 . C . PASS END=100938039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 100938040 . C . PASS END=100938046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:13:0,23,405:0,23,255:9,0 chr2 100938047 . C . PASS END=100938048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 100938049 . T . PASS END=100938059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 100938060 . A . PASS END=100938075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:10:6:0,10,225:0,10,188:6,0 chr2 100938076 . G . PASS END=100938076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 100938077 . A . PASS END=100938115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr2 100938116 . C . LowDepth;LowGQ END=100938348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 100938349 . G . PASS END=100938392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr2 100938393 . G . PASS END=100938428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:9,0 chr2 100938429 . C . PASS END=100938429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 100938430 . T . PASS END=100938468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr2 100938469 . C . LowGQ END=100938469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:8,0 chr2 100938470 . T . PASS END=100938472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 100938473 . T . PASS END=100938473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 100938474 . C . PASS END=100938476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 100938477 . A . PASS END=100938477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,225:0,10,225:8,0 chr2 100938478 . G . PASS END=100938488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 100938489 . T . PASS END=100938489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 100938490 . C . PASS END=100938493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 100938494 . T . PASS END=100938494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 100938495 . C . PASS END=100938496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 100938497 . G . PASS END=100938497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 100938498 . C . PASS END=100938510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 100938511 . A . PASS END=100938513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr2 100938514 . A . PASS END=100938519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 100938520 . G . PASS END=100938520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,2 chr2 100938521 . G . LowGQ END=100938524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:8:0,0,157:0,0,200:7,2 chr2 100938525 . G . PASS END=100938530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 100938531 . G . PASS END=100938534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 100938535 . C . PASS END=100938535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 100938536 . G . PASS END=100938541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 100938542 . G . PASS END=100938542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr2 100938543 . G . PASS END=100938544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 100938545 . T . LowGQ END=100938545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:7,0,247:5,0 chr2 100938546 . C . PASS END=100938546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 100938547 . G . PASS END=100938547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 100938548 . G . PASS END=100938548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 100938549 . G . PASS END=100938549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 100938550 . G . PASS END=100938551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 100938552 . T . PASS END=100938552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr2 100938553 . C . PASS END=100938555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 101009707 . T . PASS END=101009731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1219:0,88,255:35,0 chr2 101009732 . T . PASS END=101009732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:33,0 chr2 101009733 . G . PASS END=101009821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1131:0,80,255:40,0 chr2 101009822 . T . PASS END=101009822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:30,0 chr2 101009823 . T . PASS END=101009847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1158:0,83,255:33,0 chr2 101009848 . C . PASS END=101009849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:31:0,60,1123:0,60,255:28,0 chr2 101009850 . G . PASS END=101009852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 101009853 . G . PASS END=101009853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 101009854 . G . PASS END=101009857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 101009858 . G . PASS END=101009858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 101009859 . T . PASS END=101009864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 101009865 . A . PASS END=101009867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 101009868 . A . PASS END=101009874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101009875 . G . PASS END=101009877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 101009878 . G . PASS END=101009878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101009879 . T . PASS END=101009891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 101009892 . C . PASS END=101009893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 101009894 . T . PASS END=101009894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,903:0,70,255:27,0 chr2 101009895 . T . PASS END=101009903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr2 101009904 . A . PASS END=101009934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr2 101009935 . T . PASS END=101009935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101009936 . C . PASS END=101009944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 101009945 . C . PASS END=101009945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 101009946 . T . PASS END=101009947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 101009948 . T . PASS END=101010244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:30:0,84,1260:0,89,255:40,0 chr2 101011971 . C . PASS END=101012076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,131,255:40,0 chr2 101014370 . C . PASS END=101014604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1172:0,81,255:40,0 chr2 101019026 . C . PASS END=101019117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:45:0,96,1440:0,112,255:40,0 chr2 101023038 . C . PASS END=101023158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:87:40:0,87,1305:0,89,255:40,1 chr2 101023159 . A . PASS END=101023162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:35:0,66,1170:0,66,255:26,0 chr2 101031503 . C . PASS END=101031537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,726:0,66,255:24,0 chr2 101031538 . T . PASS END=101031538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr2 101031539 . T . PASS END=101031550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 101031551 . G . PASS END=101031551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 101031552 . A . PASS END=101031552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 101031553 . G . PASS END=101031553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 101031554 . G . PASS END=101031554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 101031555 . T . PASS END=101031567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,52,255:18,0 chr2 101031568 . T . PASS END=101031568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:13,0 chr2 101031569 . T . PASS END=101031573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:15,0 chr2 101033451 . C . PASS END=101033491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1230:0,92,255:37,0 chr2 101086951 . A . PASS END=101087026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,158,255:40,0 chr2 101089257 . G . PASS END=101089312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,143,255:40,0 chr2 101089951 . C . PASS END=101090001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:77:0,120,1800:0,198,255:40,0 chr2 101093706 . G . PASS END=101093729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:37:0,90,1364:0,90,255:40,0 chr2 101093823 . T . PASS END=101093876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,114,1598:0,116,255:40,0 chr2 101095815 . T . PASS END=101095815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 101095816 . T . PASS END=101095824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:23,0 chr2 101095825 . T . PASS END=101095825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 101095826 . G . PASS END=101095837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,884:0,64,255:26,0 chr2 101095838 . G . PASS END=101095860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr2 101095861 . A . PASS END=101095861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,895:0,70,255:27,0 chr2 101095862 . C . PASS END=101095883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,934:0,81,255:27,0 chr2 101095884 . C . PASS END=101095889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:26,0 chr2 101096958 . G . PASS END=101096993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1596:0,105,255:40,0 chr2 101097588 . G . PASS END=101097629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,151,255:40,0 chr2 101098739 . C . PASS END=101098773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,188,255:40,0 chr2 101099714 . G . PASS END=101099726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,201,255:40,0 chr2 101179530 . A . PASS END=101179531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 101179532 . G . PASS END=101179534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 101179535 . G . PASS END=101179535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 101182965 . G . PASS END=101183091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:55:0,120,1800:0,153,255:40,2 chr2 101185393 . T . PASS END=101185483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:45:0,99,1556:0,99,255:40,0 chr2 101186040 . A . PASS END=101186040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:31,0 chr2 101186041 . C . PASS END=101186041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:33,0 chr2 101186042 . G . PASS END=101186163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1215:0,99,255:40,0 chr2 101186164 . T . PASS END=101186165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 101186166 . G . PASS END=101186173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 101186174 . A . PASS END=101186183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:24,0 chr2 101188052 . A . PASS END=101188060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:26,0 chr2 101188061 . C . PASS END=101188062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 101188063 . G . PASS END=101188066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 101188067 . C . PASS END=101188147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1146:0,84,255:36,0 chr2 101188148 . A . PASS END=101188148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:31,0 chr2 101188149 . C . PASS END=101188292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:91:40:0,91,1443:0,91,255:40,0 chr2 101192816 . A . PASS END=101192849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:35:0,94,1153:0,94,255:37,0 chr2 101192850 . T . PASS END=101192850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:34,0 chr2 101192851 . A . PASS END=101192904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,89,255:37,0 chr2 101192905 . T . PASS END=101192906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,105,255:24,0 chr2 101192907 . A . PASS END=101192913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:45:29:0,45,675:0,87,255:19,0 chr2 101192914 . C . PASS END=101192915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:39:29:0,39,585:0,87,255:13,0 chr2 101192916 . C . PASS END=101192923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:22:0,42,630:0,66,255:16,0 chr2 101192924 . T . PASS END=101192924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:15,0 chr2 101192925 . C . PASS END=101192936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:16,0 chr2 101192937 . C . PASS END=101192954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr2 101192955 . C . PASS END=101192956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 101192957 . G . PASS END=101192958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:12:11:0,12,180:0,33,255:4,0 chr2 101437489 . A . PASS END=101437495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:32,0 chr2 101437496 . C . PASS END=101437496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1073:0,60,255:32,0 chr2 101437497 . G . PASS END=101437653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:83:33:0,83,1146:0,83,255:40,0 chr2 101437654 . T . PASS END=101437655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1115:0,77,255:26,0 chr2 101437656 . C . PASS END=101437657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 101437658 . C . PASS END=101437661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:25,0 chr2 101521195 . G . PASS END=101521223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:70:0,120,1800:0,172,255:40,0 chr2 101521224 . A . PASS END=101521248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:74:0,120,1800:0,164,255:40,0 chr2 101541608 . A . PASS END=101541760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,108,1324:0,111,255:40,0 chr2 101541761 . A . PASS END=101541762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,117,1755:0,141,255:39,0 chr2 101549372 . A . PASS END=101549463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,104,1480:0,104,255:40,0 chr2 101554215 . G . PASS END=101554304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1241:0,84,255:40,0 chr2 101564697 . T . PASS END=101564817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:55:0,110,1800:0,110,255:40,0 chr2 101565829 . C . PASS END=101565942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,158,255:40,0 chr2 101580520 . T . PASS END=101580638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:97:38:0,97,1365:0,97,255:40,0 chr2 101581323 . G . PASS END=101581337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,147,255:40,0 chr2 101581338 . G . PASS END=101581405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,157,255:40,0 chr2 101582122 . A . PASS END=101582228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,128,255:40,0 chr2 101584743 . T . PASS END=101584883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1139:0,80,255:40,0 chr2 101584884 . T . PASS END=101584890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:26,0 chr2 101587452 . T . PASS END=101587536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:36:0,90,1274:0,90,255:40,0 chr2 101591265 . G . PASS END=101591270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 101591271 . G . PASS END=101591277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 101591278 . G . PASS END=101591278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 101591279 . C . PASS END=101591284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 101591285 . A . PASS END=101591285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 101591286 . C . PASS END=101591392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1147:0,80,255:40,0 chr2 101591393 . G . PASS END=101591406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,969:0,65,255:26,0 chr2 101591920 . C . PASS END=101591944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,652:0,51,255:19,0 chr2 101591945 . G . PASS END=101591950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 101591951 . C . PASS END=101591951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr2 101591952 . A . PASS END=101591956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 101591957 . G . PASS END=101591957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 101591958 . G . PASS END=101591966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 101591967 . A . PASS END=101591968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 101591969 . A . PASS END=101591969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:17,0 chr2 101591970 . T . PASS END=101591971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,810:0,53,255:19,0 chr2 101591972 . A . PASS END=101591972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:19,0 chr2 101591973 . G . PASS END=101591977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr2 101591978 . C . PASS END=101591979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 101591980 . T . PASS END=101592023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,596:0,43,255:19,0 chr2 101592024 . A . PASS END=101592029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 101594172 . G . PASS END=101594259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1111:0,86,255:39,0 chr2 101594260 . A . PASS END=101594261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 101598693 . T . PASS END=101598702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 101598703 . A . PASS END=101598703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 101598704 . G . PASS END=101598712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 101598713 . G . PASS END=101598839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1259:0,89,255:40,0 chr2 101599075 . G . PASS END=101599159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:40:0,81,1215:0,103,255:40,0 chr2 101599160 . G . PASS END=101599164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:63:38:0,63,945:0,107,255:25,0 chr2 101604541 . A . PASS END=101604541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr2 101604542 . T . PASS END=101604542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 101604543 . G . PASS END=101604550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:22,0 chr2 101604551 . A . PASS END=101604551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 101604552 . G . PASS END=101604555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:23,0 chr2 101604556 . C . PASS END=101604556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 101604557 . C . PASS END=101604572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,847:0,69,255:26,0 chr2 101604573 . C . PASS END=101604573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 101604574 . T . PASS END=101604574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 101604575 . T . PASS END=101604576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 101604577 . A . PASS END=101604577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 101604578 . G . PASS END=101604614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1117:0,87,255:30,0 chr2 101604615 . G . PASS END=101604615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 101604616 . C . PASS END=101604618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101604619 . A . PASS END=101604619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 101604620 . G . PASS END=101604620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,986:0,43,255:26,0 chr2 101604621 . G . PASS END=101604622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 101604623 . C . PASS END=101604638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,970:0,67,255:26,0 chr2 101604639 . G . PASS END=101604640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 101604641 . C . PASS END=101604641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 101604642 . C . PASS END=101604645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 101604646 . C . PASS END=101604672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,992:0,68,255:28,0 chr2 101604673 . C . PASS END=101604675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr2 101604676 . A . PASS END=101604676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 101604677 . T . PASS END=101604677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:24,0 chr2 101604678 . C . PASS END=101604678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 101604679 . T . PASS END=101604679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr2 101604680 . C . PASS END=101604703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:25,0 chr2 101604704 . A . PASS END=101604704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr2 101604705 . C . PASS END=101604707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 101604708 . G . PASS END=101604708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:18,0 chr2 101604709 . C . PASS END=101604728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:19,0 chr2 101604729 . A . PASS END=101604729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 101604730 . T . PASS END=101604730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 101604731 . C . PASS END=101604736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 101604737 . A . PASS END=101604737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:11,0 chr2 101604738 . G . PASS END=101604738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 101606718 . G . PASS END=101606753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,748:0,66,255:26,0 chr2 101606754 . A . PASS END=101606908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,986:0,81,255:40,0 chr2 101607242 . G . PASS END=101607334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:39:0,96,1418:0,101,255:40,0 chr2 101609809 . G . PASS END=101609826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr2 101609827 . C T, 80.11 PASS DP=11;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,7,0:0,4,0:30:118,33,0,419,33,419:255,33,0:0,0:8.0108e+01,3.0108e+01,4.2396e-03,4.1556e+02,6.4878e+01,4.1856e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,4:0,0,7,4 chr2 101609828 . G . PASS END=101609842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 101609843 . G . PASS END=101609864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:15,0 chr2 101609865 . G . PASS END=101609901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,511:0,42,255:17,0 chr2 101609902 . G . PASS END=101609902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr2 101609903 . G . PASS END=101609904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 101609905 . G . PASS END=101609905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 101609906 . C . PASS END=101609954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,615:0,51,255:18,0 chr2 101609955 . A . PASS END=101609955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 101609956 . G . PASS END=101609968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 101609969 . C . PASS END=101609982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 101609983 . C . PASS END=101609989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 101610886 . A . PASS END=101610915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,203,255:40,0 chr2 101611862 . G . PASS END=101611864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr2 101611865 . C . PASS END=101611865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr2 101611866 . A . PASS END=101611870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr2 101611871 . C . PASS END=101611871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 101611872 . C . PASS END=101611880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,826:0,72,255:25,0 chr2 101611881 . T . PASS END=101611881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 101611882 . G . PASS END=101611886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 101611887 . G . PASS END=101611898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:31,0 chr2 101611899 . A . PASS END=101611899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:29,0 chr2 101611900 . C . PASS END=101611903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:33,0 chr2 101611904 . C . PASS END=101611904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr2 101611905 . T . PASS END=101611998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:35:0,91,1206:0,91,255:38,0 chr2 101611999 . C . PASS END=101611999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:32,0 chr2 101612000 . A . PASS END=101612006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1355:0,95,255:34,0 chr2 101612007 . T . PASS END=101612007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:30,0 chr2 101612008 . G . PASS END=101612043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1131:0,80,255:32,0 chr2 101612044 . A . PASS END=101612044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:25,0 chr2 101612258 . G . PASS END=101612278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,130,255:40,0 chr2 101619164 . A . PASS END=101619245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:34:0,93,1250:0,93,255:40,0 chr2 101619246 . A . PASS END=101619270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,99,1485:0,111,255:40,0 chr2 101620620 . G . PASS END=101620638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,473:0,48,255:19,0 chr2 101620639 . C . PASS END=101620661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 101620662 . G . PASS END=101620662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 101620663 . A . PASS END=101620663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 101620664 . A . PASS END=101620664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 101620665 . A . PASS END=101620676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr2 101620677 . G . PASS END=101620686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr2 101620687 . A . PASS END=101620687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:16,0 chr2 101620688 . C . PASS END=101620702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 101620703 . T . PASS END=101620703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 101620704 . T . PASS END=101620705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 101620706 . A . PASS END=101620752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,675:0,44,255:19,0 chr2 101622421 . G . PASS END=101622421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,906:0,47,255:24,0 chr2 101622422 . A . PASS END=101622424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 101622425 . G . PASS END=101622426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101622427 . G . PASS END=101622427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 101622428 . C . PASS END=101622475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1096:0,87,255:39,0 chr2 101622476 . G . PASS END=101622476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1324:0,70,255:34,0 chr2 101622477 . A . PASS END=101622545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1147:0,80,255:38,0 chr2 101622546 . T . PASS END=101622553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 101622812 . A . PASS END=101622843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:85:0,120,1800:0,236,255:40,0 chr2 101624283 . C . PASS END=101624433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,120,1800:0,171,255:40,0 chr2 101624434 . G . PASS END=101624470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:47:0,120,1800:0,141,255:40,0 chr2 101624471 . T C, 184.98 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,20,0:0,26,0:135:223,138,0,1741,138,1741:255,141,0:0,0:1.8498e+02,1.3498e+02,0.0000e+00,4.5000e+02,1.6975e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,34:0,0,22,24 chr2 101624472 . T . PASS END=101624508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:39:0,96,1440:0,102,255:40,0 chr2 101624509 . G . PASS END=101624522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:37:0,101,1426:0,101,255:36,0 chr2 101624523 . T . PASS END=101624523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr2 101624524 . G . PASS END=101624529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:35,0 chr2 101624530 . A . PASS END=101624530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1317:0,75,255:35,0 chr2 101624531 . C . PASS END=101624604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1213:0,84,255:36,0 chr2 101624605 . C . PASS END=101624605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 101624606 . C . PASS END=101624608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 101624609 . G . PASS END=101624609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 101624610 . C . PASS END=101624611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 101624612 . G . PASS END=101624612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr2 101624613 . C . PASS END=101624646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:33,0 chr2 101624647 . A . PASS END=101624647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:30,0 chr2 101624648 . C . PASS END=101624669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1133:0,90,255:31,0 chr2 101624670 . A . PASS END=101624670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr2 101624671 . T . PASS END=101624671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 101624672 . C . PASS END=101624672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 101624673 . A . PASS END=101624679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 101624680 . T . PASS END=101624700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:26,0 chr2 101624701 . C . PASS END=101624735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 101627391 . C . PASS END=101627394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,205,255:40,0 chr2 101627395 . C . PASS END=101627488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:60:0,120,1800:0,152,255:40,0 chr2 101627913 . C . PASS END=101628002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:35:0,89,1278:0,89,255:40,0 chr2 101634321 . G . PASS END=101634367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,174,255:40,0 chr2 101635460 . T . PASS END=101635461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr2 101635462 . T . PASS END=101635462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 101635463 . C . PASS END=101635466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1172:0,93,255:33,0 chr2 101635467 . G . PASS END=101635467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr2 101635468 . C . PASS END=101635500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:34:0,96,1242:0,98,255:37,0 chr2 101638143 . C . PASS END=101638208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:99:65:0,120,1800:0,188,255:40,0 chr2 101638743 . C . PASS END=101638749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 101638750 . G . PASS END=101638753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 101638754 . A . PASS END=101638754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 101638755 . C . PASS END=101638757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 101638758 . A . PASS END=101638758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,629:0,43,255:19,0 chr2 101638759 . C . PASS END=101638774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,754:0,60,255:23,0 chr2 101638775 . A . PASS END=101638775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:22,0 chr2 101638776 . G . PASS END=101638776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 101638777 . C . PASS END=101638777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 101638778 . T . PASS END=101638782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr2 101638783 . C . PASS END=101638783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 101638784 . A . PASS END=101638805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,947:0,64,255:26,0 chr2 101638806 . A . PASS END=101638810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr2 101638811 . C . PASS END=101638811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr2 101638812 . T . PASS END=101638815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 101638816 . G . PASS END=101638826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,986:0,68,255:26,0 chr2 101638827 . C . PASS END=101638827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101638828 . C . PASS END=101638828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 101638829 . G . PASS END=101638829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 101638830 . T . PASS END=101638830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 101638831 . G . PASS END=101638834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 101638835 . G . PASS END=101638835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,2 chr2 101638836 . C . PASS END=101638836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,992:0,21,255:27,2 chr2 101638837 . C . PASS END=101638837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:28,0 chr2 101638838 . C . PASS END=101638843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr2 101638844 . G . PASS END=101638844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 101638845 . T . PASS END=101638845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 101638846 . C . PASS END=101638850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 101638851 . G . PASS END=101638854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 101638855 . G . PASS END=101638873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1070:0,87,255:29,0 chr2 101638874 . G . PASS END=101638874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 101638875 . C . PASS END=101638876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 101638877 . A . PASS END=101638877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 101638878 . A . PASS END=101638887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 101638888 . A G, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,15,0:0,13,0:81:169,84,0,1086,84,1086:255,84,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,19:0,0,14,14 chr2 101638889 . T . PASS END=101638907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:23,0 chr2 101638908 . C . PASS END=101638920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,53,255:19,0 chr2 101638921 . G . PASS END=101638925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 101638926 . C . PASS END=101638939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr2 101638940 . A . PASS END=101638941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr2 101638942 . G . PASS END=101638963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 101638964 . C . PASS END=101638983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,266:0,24,219:8,0 chr2 101640087 . T . LowGQ END=101640087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:0:50:0,0,1492:56,0,255:40,1 chr2 101640088 . T . PASS END=101640103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,112,1768:0,112,255:40,0 chr2 101643845 . C . PASS END=101643888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:38:0,80,1356:0,80,255:40,0 chr2 101643889 . A . PASS END=101643889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:38,0 chr2 101643890 . G . PASS END=101643913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:37:0,96,1350:0,96,255:40,0 chr2 101644510 . C . PASS END=101644608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:35:0,99,1183:0,105,255:40,0 chr2 101644765 . C . PASS END=101644817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1413:0,101,255:40,0 chr2 101644818 . G . PASS END=101644854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,147,255:40,0 chr2 101644855 . G A, 197.02 PASS DP=50;MQ=249.44;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,28,0:0,22,0:147:235,150,0,1902,150,1902:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,30:0,0,28,22 chr2 101644856 . G . PASS END=101644892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:37:0,87,1305:0,95,255:40,0 chr2 101644893 . A . PASS END=101644894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 101645953 . C . PASS END=101645953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 101645954 . T . PASS END=101645954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 101645955 . G . PASS END=101645956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,435:0,39,255:13,0 chr2 101645957 . T . PASS END=101645957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 101645958 . G . PASS END=101645958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 101645959 . A . PASS END=101645959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 101645960 . G . PASS END=101645960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:11,0 chr2 101645961 . G . PASS END=101645964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 101645965 . A . PASS END=101645970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 101645971 . G . PASS END=101645972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 101645973 . C . PASS END=101645978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr2 101645979 . A . PASS END=101645979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:17,0 chr2 101645980 . T . PASS END=101645980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 101645981 . C . PASS END=101645981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:16,0 chr2 101645982 . A . PASS END=101645985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,651:0,41,255:19,0 chr2 101645986 . T . PASS END=101645986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,643:0,16,255:19,0 chr2 101645987 . T . PASS END=101645993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 101645994 . G . PASS END=101646225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,909:0,84,255:40,0 chr2 101646226 . T . PASS END=101646235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:26,0 chr2 101646236 . C . PASS END=101646236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:23,0 chr2 101646237 . C . PASS END=101646238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,81,255:24,0 chr2 101648730 . C . PASS END=101648730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 101648731 . G . PASS END=101648731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr2 101648732 . A . PASS END=101648837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1070:0,84,255:40,0 chr2 101648838 . T . PASS END=101648847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:26,0 chr2 101649850 . T . PASS END=101649856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,846:0,69,255:26,0 chr2 101649857 . A . PASS END=101649866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 101649867 . T . PASS END=101649875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 101649876 . G . PASS END=101650097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:29:0,82,1149:0,82,255:40,0 chr2 101650098 . G . PASS END=101650098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,0 chr2 101650099 . C . PASS END=101650182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1350:0,99,255:39,0 chr2 101650183 . G . PASS END=101650183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 101650184 . T . PASS END=101650192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:31,0 chr2 101650193 . G . PASS END=101650220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,894:0,64,255:26,0 chr2 101652264 . C . PASS END=101652427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:42:0,88,1543:0,88,255:40,0 chr2 101652480 . C . PASS END=101652629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:83:32:0,83,1178:0,83,255:40,0 chr2 101652630 . A . PASS END=101652630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 101653994 . C . PASS END=101654036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr2 101654037 . G . PASS END=101654044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 101654045 . G . PASS END=101654046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 101654047 . C . PASS END=101654047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:25,0 chr2 101654048 . A . PASS END=101654070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr2 101654071 . T . PASS END=101654071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1004:0,79,255:29,0 chr2 101654072 . C . PASS END=101654077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:30,0 chr2 101654078 . C . PASS END=101654079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr2 101654080 . C . PASS END=101654133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1150:0,83,255:33,0 chr2 101654134 . C . PASS END=101654158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:25,0 chr2 101654159 . C . PASS END=101654170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr2 101654923 . C . PASS END=101654962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1111:0,90,255:36,0 chr2 101654963 . T . PASS END=101654963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:32,0 chr2 101654964 . T . PASS END=101655083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:32:0,87,1211:0,88,255:40,0 chr2 101655084 . G . PASS END=101655086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 101655087 . T . PASS END=101655087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:25,0 chr2 101655088 . C . PASS END=101655107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,787:0,61,255:25,0 chr2 101655108 . T . PASS END=101655117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr2 101656640 . C . PASS END=101656641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101656642 . C . PASS END=101656643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 101656644 . C . PASS END=101656646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101656647 . A . PASS END=101656647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 101656648 . G . PASS END=101656651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 101656652 . C . PASS END=101656652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 101656653 . A . PASS END=101656688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1080:0,90,255:38,0 chr2 101656689 . A . PASS END=101656725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1362:0,111,255:38,0 chr2 101656726 . T C, 167.39 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,21,0:0,19,0:117:205,120,0,1551,120,1551:255,120,0:0,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,22:0,0,15,25 chr2 101656727 . G . PASS END=101656759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,102,1308:0,103,255:39,0 chr2 101656760 . A . PASS END=101656760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1252:0,68,255:33,0 chr2 101656761 . C . PASS END=101656763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:40,0 chr2 101656764 . T . PASS END=101656817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:36:0,84,1260:0,95,255:40,0 chr2 101656818 . A . PASS END=101656818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1248:0,72,255:30,0 chr2 101656819 . A . PASS END=101656819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1249:0,56,255:29,0 chr2 101656820 . C . PASS END=101656820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:30,0 chr2 101656821 . T . PASS END=101656833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 101656834 . T . PASS END=101656834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 101656835 . G . PASS END=101656838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101656839 . T . PASS END=101656839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 101656840 . C . PASS END=101656843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 101656844 . G . PASS END=101656847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 101666863 . C . PASS END=101666866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 101666867 . T . PASS END=101666867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 101666868 . G . PASS END=101666878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,901:0,75,255:25,0 chr2 101666879 . T . PASS END=101666880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:24,0 chr2 101666881 . G . PASS END=101666888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 101666889 . C . PASS END=101666889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:24,0 chr2 101666890 . A . PASS END=101666903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr2 101666904 . G . PASS END=101666907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 101666908 . A . PASS END=101666920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,885:0,64,255:26,0 chr2 101666921 . C . PASS END=101666926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101666927 . G . PASS END=101666927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 101666928 . C . PASS END=101666930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:28,0 chr2 101666931 . T . PASS END=101666932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 101666933 . G . PASS END=101666933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 101666934 . C . PASS END=101666934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 101666935 . A . PASS END=101666952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1054:0,80,255:31,0 chr2 101666953 . T . PASS END=101666954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 101666955 . C . PASS END=101666959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 101666960 . T . PASS END=101666961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 101666962 . A . PASS END=101666976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1155:0,80,255:29,0 chr2 101666977 . T . PASS END=101666977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 101666978 . C . PASS END=101666988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1088:0,90,255:30,0 chr2 101666989 . A . PASS END=101666991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr2 101666992 . A . PASS END=101666993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:27,0 chr2 101666994 . G . PASS END=101667008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr2 101667009 . C . PASS END=101667009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:22,0 chr2 101667010 . T . PASS END=101667016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:29:0,75,1125:0,79,255:26,0 chr2 101667017 . G . PASS END=101667024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1116:0,84,255:29,0 chr2 101667025 . A . PASS END=101667025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 101667026 . T . PASS END=101667026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 101667027 . T . PASS END=101667027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 101667028 . C . PASS END=101667038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 101667039 . C . PASS END=101667039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 101667040 . G . PASS END=101667046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 101667047 . A . PASS END=101667047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 101667048 . G . PASS END=101667048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101667049 . A . PASS END=101667049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr2 101667050 . C . PASS END=101667052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 101667053 . T . PASS END=101667053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:28,0 chr2 101667054 . G . PASS END=101667077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1147:0,80,255:32,0 chr2 101667078 . A . PASS END=101667078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 101667079 . T . PASS END=101667079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101667080 . C . PASS END=101667103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 101670570 . G . PASS END=101670580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 101670581 . A . PASS END=101670581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 101670582 . G . PASS END=101670605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 101670606 . G . PASS END=101670607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 101670608 . T . PASS END=101670608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:28,0 chr2 101670609 . T . PASS END=101670631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1078:0,86,255:30,0 chr2 101670632 . T . PASS END=101670632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 101670633 . G . PASS END=101670638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 101670639 . G . PASS END=101670650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr2 101670651 . T . PASS END=101670651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 101670652 . C . PASS END=101670656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 101670657 . A . PASS END=101670657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 101670658 . G . PASS END=101670660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 101670661 . G . PASS END=101670665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 101670666 . A . PASS END=101670669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:20,0 chr2 101670670 . G . PASS END=101670670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 101670671 . T . PASS END=101670693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:22,0 chr2 101670694 . G . PASS END=101670694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 101670695 . G . PASS END=101670696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 101670697 . G . PASS END=101670697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 101670698 . A . PASS END=101670701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 101670702 . T . PASS END=101670706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 101670707 . C . PASS END=101670717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 101670718 . C . PASS END=101670748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr2 101670749 . T . PASS END=101670749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:15,0 chr2 101670750 . C . PASS END=101670753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 101670754 . C . PASS END=101670757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 101670758 . T . PASS END=101670769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 101670770 . C . PASS END=101670780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 101670781 . C . PASS END=101670794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr2 101670795 . G . PASS END=101670798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 101675883 . C . PASS END=101676001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1305:0,93,255:40,0 chr2 101706671 . C . PASS END=101706676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 101706677 . C . PASS END=101706677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 101706678 . T . PASS END=101706684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr2 101706685 . C . PASS END=101706685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 101706686 . A . PASS END=101706690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,819:0,72,255:25,0 chr2 101706691 . A . PASS END=101706691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,681:0,58,255:24,0 chr2 101706692 . C . PASS END=101706693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr2 101706694 . T . PASS END=101706694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 101706695 . C . PASS END=101706800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1064:0,86,255:40,0 chr2 101706801 . T . PASS END=101706812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1000:0,68,255:26,0 chr2 101706813 . G . PASS END=101706813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 101706814 . C . PASS END=101706826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,929:0,62,255:25,0 chr2 101726297 . C . PASS END=101726298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 101726299 . A . PASS END=101726299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 101726300 . C . PASS END=101726301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:25,0 chr2 101726302 . G . PASS END=101726335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1011:0,84,255:36,0 chr2 101726336 . A . PASS END=101726336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr2 101726337 . A . PASS END=101726346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1318:0,81,255:36,0 chr2 101726347 . G . PASS END=101726347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1341:0,62,255:35,0 chr2 101726348 . G . PASS END=101726389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:37:0,82,1135:0,82,255:39,0 chr2 101726390 . G . PASS END=101726393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1350:0,108,255:31,0 chr2 101726394 . T . PASS END=101726395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr2 101726396 . C . PASS END=101726396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1186:0,28,255:30,0 chr2 101726397 . A . PASS END=101726398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:30,0 chr2 101726399 . G . PASS END=101726405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 101726406 . A . PASS END=101726426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:24,0 chr2 101726427 . T C, 115.76 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,15,0:0,8,0:66:154,69,0,834,69,834:255,69,0:0,0:1.1576e+02,6.5757e+01,1.0354e-06,4.5000e+02,1.0053e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,18:0,0,9,14 chr2 101726428 . T . PASS END=101726435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 101726436 . C . PASS END=101726444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,615:0,43,255:17,0 chr2 101767589 . C . PASS END=101767601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 101767602 . G . PASS END=101767602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr2 101767603 . C . PASS END=101767629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,294:0,24,255:9,0 chr2 101767630 . T . PASS END=101767630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 101767631 . G . PASS END=101767647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 101767648 . C . PASS END=101767651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 101767652 . T . PASS END=101767652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 101767653 . C . PASS END=101767656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 101767657 . T . PASS END=101767657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 101767658 . G . PASS END=101767664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 101767665 . C . PASS END=101767669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 101767670 . G . PASS END=101767670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr2 101767671 . C . PASS END=101767703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 101767704 . C . PASS END=101767713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,255:6,0 chr2 101767714 . A . PASS END=101767715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,249:3,0 chr2 101804696 . C . PASS END=101804759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,125,255:40,0 chr2 101869427 . A . PASS END=101869435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr2 101869436 . G . PASS END=101869437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 101869438 . A . PASS END=101869438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 101869439 . G . PASS END=101869461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 101869462 . G . PASS END=101869462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 101869463 . C . PASS END=101869477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,662:0,57,255:19,0 chr2 101869478 . G . PASS END=101869488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,931:0,64,255:26,0 chr2 101869489 . G . PASS END=101869491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101869492 . C . PASS END=101869492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:26,0 chr2 101869493 . C . PASS END=101869496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101869497 . A . PASS END=101869497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 101869498 . A . PASS END=101869503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1141:0,84,255:30,0 chr2 101869504 . A . PASS END=101869504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 101869505 . G . PASS END=101869562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1149:0,82,255:34,0 chr2 101869563 . G . PASS END=101869563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1088:0,65,255:31,0 chr2 101869564 . C . PASS END=101869565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:32,0 chr2 101869566 . C . PASS END=101869566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr2 101869567 . C . PASS END=101869573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1133:0,82,255:32,0 chr2 101869574 . G . PASS END=101869574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr2 101869575 . G . PASS END=101869616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1142:0,83,255:34,0 chr2 101869617 . C . PASS END=101869617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:29,0 chr2 101869618 . C . PASS END=101869636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,939:0,82,255:30,0 chr2 101869637 . C . PASS END=101869637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 101869638 . T . PASS END=101869641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 101869642 . G . PASS END=101869646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 101869647 . T . PASS END=101869650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101869651 . A . PASS END=101869651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 101869652 . T . PASS END=101869652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr2 101869653 . C . PASS END=101869674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,917:0,64,255:25,0 chr2 101869675 . C . PASS END=101869676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,59,255:20,0 chr2 101869677 . C . PASS END=101869686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:22,0 chr2 101869687 . C . PASS END=101869687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:20,0 chr2 101869688 . C . PASS END=101869695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,64,255:21,0 chr2 101869696 . C . PASS END=101869696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:19,0 chr2 101869697 . G . PASS END=101869697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 101869698 . C . PASS END=101869699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,831:0,55,255:21,0 chr2 101869700 . T . PASS END=101869702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 101869703 . C . PASS END=101869713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,56,255:18,0 chr2 101869714 . C . PASS END=101869732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,717:0,60,255:21,0 chr2 101869733 . C . PASS END=101869733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 101869734 . G . PASS END=101869737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 101869738 . G . PASS END=101869753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 101869754 . A . PASS END=101869758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 101869759 . G . PASS END=101869759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 101869760 . C . PASS END=101869775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 101869776 . T . PASS END=101869789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,737:0,57,255:19,0 chr2 101869790 . G . PASS END=101869794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr2 101869795 . G . PASS END=101869795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,638:0,46,255:20,0 chr2 101869796 . C . PASS END=101869797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,703:0,63,255:22,0 chr2 101869798 . C . PASS END=101869798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,662:0,35,255:21,0 chr2 101869799 . C . PASS END=101869799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 101869800 . T . PASS END=101869800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,540:0,32,255:20,0 chr2 101869801 . C . PASS END=101869803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,686:0,49,255:21,0 chr2 101869804 . G . LowGQ END=101869804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,531:34,0,255:19,0 chr2 101869805 . G . PASS END=101869805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr2 101869806 . C . PASS END=101869806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,748:0,33,255:21,0 chr2 101869807 . G . PASS END=101869807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,757:0,22,255:19,0 chr2 101869808 . C . PASS END=101869808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 101869809 . T . PASS END=101869809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,665:0,55,255:21,0 chr2 101869810 . C . PASS END=101869811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,881:0,67,255:26,0 chr2 101869812 . A . PASS END=101869812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,853:0,34,255:23,0 chr2 101869813 . C . PASS END=101869813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:3:28:0,3,767:0,3,255:22,0 chr2 101869814 . C . PASS END=101869816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,852:0,67,255:27,0 chr2 101869817 . C . PASS END=101869817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,995:0,49,255:27,0 chr2 101869818 . T . LowGQ END=101869818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,6:32:0:32:0,0,810:3,0,255:24,0 chr2 101869819 . C . PASS END=101869821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,958:0,60,255:27,0 chr2 101869822 . G . PASS END=101869823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 101869824 . A . PASS END=101869824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,953:0,43,255:25,0 chr2 101869825 . G . PASS END=101869825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:21:31:0,21,969:0,21,255:25,0 chr2 101869826 . A . PASS END=101869826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 101869827 . T . PASS END=101869827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:27,0 chr2 101869828 . G . PASS END=101869828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:19:36:0,19,1017:0,19,255:27,0 chr2 101869829 . T . PASS END=101869829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 101869830 . A . PASS END=101869830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:29,0 chr2 101869831 . C . PASS END=101869831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:24:35:0,24,1016:0,24,255:28,0 chr2 101869832 . C . PASS END=101869832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 101869833 . G . PASS END=101869833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1039:0,17,255:29,0 chr2 101869834 . C . PASS END=101869834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 101869835 . A . PASS END=101869835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1073:0,72,255:31,0 chr2 101869836 . C . PASS END=101869837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1107:0,88,255:33,0 chr2 101869838 . G . PASS END=101869838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:8:34:0,8,1062:0,8,255:31,0 chr2 101869839 . A . PASS END=101869839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:32,0 chr2 101869840 . G . PASS END=101869840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr2 101869841 . C . PASS END=101869842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 101869843 . G . PASS END=101869843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:33,0 chr2 101869844 . C . PASS END=101869844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 101869845 . T . PASS END=101869845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:32,0 chr2 101869846 . G . PASS END=101869849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1219:0,88,255:36,0 chr2 101869850 . G . PASS END=101869850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1208:0,61,255:34,0 chr2 101869851 . C . PASS END=101869860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1242:0,81,255:38,0 chr2 101869861 . C . PASS END=101869861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:37,0 chr2 101869862 . G . PASS END=101869864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1415:0,117,255:39,0 chr2 101869865 . G . PASS END=101869865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1263:0,53,255:36,0 chr2 101869866 . C . PASS END=101869868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:38,0 chr2 101869869 . G . PASS END=101869869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1294:0,67,255:34,0 chr2 101869870 . C . PASS END=101869872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1273:0,87,255:37,0 chr2 101869873 . C . PASS END=101869873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1337:0,51,255:36,0 chr2 101869874 . G . PASS END=101869875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:40:0,89,1390:0,89,255:37,0 chr2 101869876 . G . PASS END=101869876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1331:0,71,255:34,0 chr2 101869877 . C . PASS END=101869884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:39:0,82,1319:0,82,255:36,0 chr2 101869885 . C . PASS END=101869885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:32,0 chr2 101869886 . A . PASS END=101869891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,101,255:32,0 chr2 101869892 . G . PASS END=101869892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1135:0,53,255:30,0 chr2 101869893 . C . PASS END=101869896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:35:0,92,1288:0,92,255:31,0 chr2 101869897 . G . PASS END=101869897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1092:0,30,255:30,0 chr2 101869898 . C . PASS END=101869900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1263:0,86,255:30,0 chr2 101869901 . G . PASS END=101869901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:30,0 chr2 101869902 . C . PASS END=101869904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1202:0,83,255:30,0 chr2 101869905 . G . PASS END=101869905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:29:33:0,29,1043:0,29,255:29,0 chr2 101869906 . C . PASS END=101869906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 101869907 . G . PASS END=101869907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr2 101869908 . G . PASS END=101869916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 101869917 . A . PASS END=101869917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 101869918 . A . PASS END=101869918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 101869919 . C . PASS END=101869919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr2 101869920 . C . PASS END=101869921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 101869922 . G . PASS END=101869940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:27,0 chr2 101874253 . G . PASS END=101874253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 101874254 . A . PASS END=101874256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 101874257 . T . PASS END=101874260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 101874261 . C . PASS END=101874263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:16,0 chr2 101874264 . C . PASS END=101874268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr2 101874269 . A . PASS END=101874269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:22,0 chr2 101874270 . A . PASS END=101874297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:25,0 chr2 101874298 . A . PASS END=101874300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 101874301 . T . PASS END=101874301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 101874302 . G . PASS END=101874303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 101874304 . T . PASS END=101874304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr2 101874305 . G . PASS END=101874337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1078:0,87,255:38,0 chr2 101874338 . G . PASS END=101874338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1260:0,75,255:35,0 chr2 101874339 . C . PASS END=101874387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,102,255:39,0 chr2 101874388 . A . PASS END=101874405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr2 101874406 . T . PASS END=101874414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 101874415 . C . PASS END=101874417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr2 101879001 . A . PASS END=101879002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 101879003 . C . PASS END=101879004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 101879005 . C . PASS END=101879005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 101879006 . C . PASS END=101879040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,956:0,81,255:33,0 chr2 101879041 . C . PASS END=101879041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr2 101879042 . C . PASS END=101879048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1373:0,98,255:34,0 chr2 101879049 . T . PASS END=101879049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:34,0 chr2 101879050 . T . PASS END=101879101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1170:0,83,255:36,0 chr2 101879102 . G . PASS END=101879127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr2 101879128 . C . PASS END=101879141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:16,0 chr2 101879142 . C . PASS END=101879152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr2 101879153 . A . PASS END=101879153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:11,0 chr2 101881307 . G . PASS END=101881311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 101881312 . T . PASS END=101881320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 101881321 . G . PASS END=101881438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:33:0,82,1120:0,82,255:40,0 chr2 101881439 . C . PASS END=101881486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr2 101881487 . T . PASS END=101881488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:19,0 chr2 101881489 . T . PASS END=101881494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr2 101881495 . C . PASS END=101881495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 101881496 . C . PASS END=101881496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 101881497 . C . PASS END=101881497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 101881498 . C . PASS END=101881498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 101881499 . A . PASS END=101881502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 101881503 . A . PASS END=101881503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:14,0 chr2 101881504 . A . PASS END=101881505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:15,0 chr2 101881506 . A . PASS END=101881509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:20:0,33,495:0,43,255:12,0 chr2 101883139 . C . PASS END=101883142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1296:0,105,255:36,0 chr2 101883143 . T . PASS END=101883143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1262:0,78,255:33,0 chr2 101883144 . T . PASS END=101883341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:37:0,99,1558:0,99,255:40,0 chr2 101885502 . A . PASS END=101885605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,120,1800:0,171,255:40,0 chr2 101885606 . A . PASS END=101885607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,203,255:40,0 chr2 101885678 . A . PASS END=101885706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,192,255:40,0 chr2 101885707 . T . PASS END=101885875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:52:0,108,1800:0,108,255:40,0 chr2 101889436 . T . PASS END=101889557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:96:34:0,96,1440:0,102,255:40,0 chr2 101889766 . T . PASS END=101889801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1260:0,86,255:40,0 chr2 101889802 . T . PASS END=101889803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:72:33:0,72,1080:0,83,255:24,0 chr2 101891181 . T . PASS END=101891197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1155:0,90,255:30,0 chr2 101891198 . T . PASS END=101891200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 101893700 . C . PASS END=101893741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:38:0,98,1349:0,98,255:40,0 chr2 101893742 . T . PASS END=101893742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:34,0 chr2 101893743 . T . PASS END=101893743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 101898282 . G . PASS END=101898285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,817:0,66,255:23,0 chr2 101898286 . A . PASS END=101898286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 101898287 . C . PASS END=101898304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr2 101898305 . T . PASS END=101898305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 101898306 . T . PASS END=101898307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 101898308 . G . PASS END=101898308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 101898309 . C . PASS END=101898309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 101898310 . A . PASS END=101898374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1205:0,84,255:39,0 chr2 101898375 . G . PASS END=101898409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,94,255:38,0 chr2 101898410 . C . PASS END=101898411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:26,0 chr2 101898412 . G C, 148.87 PASS DP=35;MQ=250.00;FractionInformativeReads=0.971 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:99:187,102,0,1288,102,1288:255,102,0:0,0:1.4887e+02,9.8871e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,19:0,0,24,10 chr2 101898413 . T . PASS END=101898413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 101898414 . C . PASS END=101898414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 101898415 . A . PASS END=101898421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr2 101898422 . C . PASS END=101898437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:29,0 chr2 101898438 . A . PASS END=101898438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 101898439 . A . PASS END=101898448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 101898449 . A . PASS END=101898449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 101898450 . A . PASS END=101898450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 101898451 . A . PASS END=101898451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,915:0,54,255:24,0 chr2 101898452 . T . PASS END=101898454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 101898455 . G . PASS END=101898455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:21,0 chr2 101898456 . C . PASS END=101898477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:23:0,60,900:0,65,255:24,0 chr2 101898478 . A . PASS END=101898478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 101898479 . G . PASS END=101898487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 101898488 . G . PASS END=101898501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,50,255:19,0 chr2 101898502 . T . PASS END=101898519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr2 101902543 . C . PASS END=101902639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,117,1755:0,121,255:40,0 chr2 101905435 . T . PASS END=101905517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:83:0,120,1800:0,212,255:40,0 chr2 101910476 . C . PASS END=101910544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:74:0,120,1800:0,221,255:40,0 chr2 101911393 . C . PASS END=101911409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,852:0,66,255:23,0 chr2 101911410 . A . PASS END=101911410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:23,0 chr2 101911411 . G . PASS END=101911414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr2 101911415 . G . PASS END=101911629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:34:0,81,1202:0,86,255:40,0 chr2 101911630 . T . PASS END=101911643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:26:0,69,1035:0,78,255:25,0 chr2 101924591 . C . PASS END=101924592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 101924593 . G . PASS END=101924631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr2 101924632 . T . PASS END=101924649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,558:0,45,255:16,0 chr2 101924650 . G . PASS END=101924650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 101924651 . C . PASS END=101924659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr2 101924660 . T . PASS END=101924660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 101924661 . C . PASS END=101924686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:18,0 chr2 101924687 . C . PASS END=101924689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 101924690 . T . PASS END=101924708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr2 101924709 . A . PASS END=101924709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 101924710 . G . PASS END=101924710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 101924711 . C . PASS END=101924712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 101924713 . A . PASS END=101924716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr2 101924717 . G . PASS END=101924740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr2 101924741 . G . PASS END=101924742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 101924743 . C . PASS END=101924743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 101924744 . C . PASS END=101924744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 101924745 . G . PASS END=101924770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:22,0 chr2 101924771 . T . PASS END=101924796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:17:0,43,660:0,43,255:19,0 chr2 101924797 . C . PASS END=101924797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 101924798 . C . PASS END=101924802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 101924803 . G . PASS END=101924804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 101924805 . C . PASS END=101924813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 101924814 . G . PASS END=101924819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:14,0 chr2 101924820 . C . PASS END=101924823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 101924824 . A . PASS END=101924835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:15:0,35,585:0,35,255:13,0 chr2 101924836 . C . PASS END=101924841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:17,0 chr2 101924842 . T . PASS END=101924843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 101924844 . G . PASS END=101924862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 101924863 . C . PASS END=101924863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 101924864 . G . PASS END=101924866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 101924867 . C . PASS END=101924867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 101924868 . A . PASS END=101924879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,584:0,40,255:17,0 chr2 101924880 . G . PASS END=101924880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 101924881 . C . PASS END=101924881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 101924882 . T . PASS END=101924882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 101924883 . C . PASS END=101924884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 101924885 . A . PASS END=101924885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 101924886 . C . PASS END=101924890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 101924891 . T . PASS END=101924891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,537:0,20,255:16,0 chr2 101924892 . C . PASS END=101924893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,568:0,51,255:17,0 chr2 101924894 . G . PASS END=101924894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 101924895 . G . PASS END=101924898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,540:0,51,255:17,0 chr2 101924899 . G . PASS END=101924900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,580:0,34,255:16,0 chr2 101924901 . C . PASS END=101924913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 101924914 . T . PASS END=101924914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 101924915 . A . PASS END=101924919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 101924920 . A . PASS END=101924920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr2 101924921 . T . PASS END=101924924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 101924925 . T . PASS END=101924925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr2 101924926 . A . PASS END=101925000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,599:0,41,255:19,0 chr2 101925001 . G . PASS END=101925001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:16,0 chr2 101925002 . C . PASS END=101925022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 101925023 . C . PASS END=101925023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 101925024 . G . PASS END=101925032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 101925033 . G . PASS END=101925033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 101925034 . C . PASS END=101925046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 101925047 . C . PASS END=101925050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 101967385 . T . PASS END=101967532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,114,1710:0,120,255:40,0 chr2 101971715 . C . PASS END=101971793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1142:0,83,255:40,0 chr2 101971794 . C . PASS END=101971800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,77,255:24,0 chr2 101971801 . G . PASS END=101971805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:25:0,57,855:0,58,255:19,0 chr2 101971806 . C . PASS END=101971811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 101971812 . G . PASS END=101971812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 101971813 . A . PASS END=101971814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 101971815 . C . PASS END=101971828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr2 101999137 . T . PASS END=101999152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,214,255:40,0 chr2 101999470 . T . PASS END=101999542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:82:0,120,1800:0,230,255:40,0 chr2 101999995 . C . PASS END=101999995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 101999996 . T . PASS END=101999996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 101999997 . G . PASS END=102000001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 102000002 . A . PASS END=102000002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 102000003 . C . PASS END=102000004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1070:0,87,255:29,0 chr2 102000005 . C . PASS END=102000006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 102000007 . C . PASS END=102000019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1111:0,80,255:34,0 chr2 102000020 . G . PASS END=102000020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:33,0 chr2 102000021 . C . PASS END=102000043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:34:0,92,1274:0,92,255:38,0 chr2 102000044 . T . PASS END=102000044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:36,0 chr2 102000045 . C . PASS END=102000149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:34:0,82,1260:0,82,255:40,0 chr2 102000150 . T . PASS END=102000150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 102000151 . G . PASS END=102000152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 102000153 . C . PASS END=102000164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,826:0,64,255:25,0 chr2 102003479 . C . PASS END=102003508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,427:0,36,255:12,0 chr2 102003509 . G . PASS END=102003516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 102003517 . C . PASS END=102003551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr2 102003552 . C . PASS END=102003555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:11:0,15,225:0,33,255:6,0 chr2 102003556 . G . PASS END=102003563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:9,0 chr2 102003564 . C . PASS END=102003564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 102003565 . C . PASS END=102003582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 102003583 . T . PASS END=102003585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 102003586 . G . PASS END=102003591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 102003592 . C . PASS END=102003597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:10,0 chr2 102003598 . G . PASS END=102003598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 102003599 . C . PASS END=102003599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 102003600 . C . PASS END=102003601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 102003602 . G . LowGQ END=102003603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:11:0,0,311:3,0,255:12,1 chr2 102003604 . A . PASS END=102003604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 102003605 . G . PASS END=102003607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,457:0,36,255:13,0 chr2 102003608 . G . PASS END=102003609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102003610 . A . PASS END=102003610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:12,0 chr2 102003611 . C . PASS END=102003619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 102003620 . T . PASS END=102003620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 102003621 . G . PASS END=102003621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 102003622 . G . PASS END=102003622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:14,0 chr2 102003623 . C . PASS END=102003623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr2 102003624 . G . PASS END=102003625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 102003626 . G . PASS END=102003626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 102003627 . G . PASS END=102003631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,501:0,45,255:16,0 chr2 102003632 . C . PASS END=102003632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 102003633 . G . PASS END=102003634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 102003635 . C . PASS END=102003635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 102003636 . C . PASS END=102003645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 102003646 . C . PASS END=102003646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 102003647 . G . PASS END=102003654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:18,0 chr2 102003655 . C . PASS END=102003655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr2 102003656 . C . PASS END=102003666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 102003667 . G . PASS END=102003667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 102003668 . G . PASS END=102003669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 102003670 . G . PASS END=102003670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 102003671 . C . PASS END=102003671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,553:0,23,255:17,0 chr2 102003672 . G . PASS END=102003673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 102003674 . G . PASS END=102003674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 102003675 . T . PASS END=102003737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr2 102003738 . G . PASS END=102003738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 102003739 . C . PASS END=102003743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 102003744 . A . PASS END=102003761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:14:0,32,495:0,32,255:13,0 chr2 102003762 . G . PASS END=102003763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102003764 . G . PASS END=102003768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:14:0,34,582:0,34,255:15,0 chr2 102003769 . C . PASS END=102003769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr2 102003770 . C . PASS END=102003771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 102003772 . G . PASS END=102003772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr2 102003773 . C . PASS END=102003773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 102003774 . T . PASS END=102003774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:12,0 chr2 102003775 . C . PASS END=102003775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 102003776 . C . PASS END=102003776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 102003777 . T . PASS END=102003777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 102003778 . C . PASS END=102003778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:13,0 chr2 102003779 . G . PASS END=102003780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 102003781 . C . PASS END=102003782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:13,0 chr2 102003783 . A . PASS END=102003789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:13,0 chr2 102003790 . T . PASS END=102003790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr2 102003791 . G . PASS END=102003791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 102003792 . G . PASS END=102003792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 102003793 . T . PASS END=102003794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr2 102003795 . A . PASS END=102003795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 102003796 . C . PASS END=102003796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 102003797 . G . PASS END=102003797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:11,0 chr2 102003798 . G . PASS END=102003798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 102003799 . C . PASS END=102003799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:11,0 chr2 102003800 . C . PASS END=102003800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:12,0 chr2 102003801 . C . PASS END=102003801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:12,0 chr2 102003802 . A . PASS END=102003803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 102003804 . G . PASS END=102003804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 102003805 . A . PASS END=102003807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,405:0,28,255:14,0 chr2 102003808 . C . PASS END=102003808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 102003809 . G . PASS END=102003811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 102003812 . G . PASS END=102003812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 102003813 . C . PASS END=102003814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 102003815 . C . PASS END=102003816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 102003817 . C . PASS END=102003818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 102003819 . A . PASS END=102003819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr2 102003820 . T . PASS END=102003820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 102003821 . C . PASS END=102003821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr2 102003822 . A . PASS END=102003822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 102003823 . C . PASS END=102003824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 102003825 . T . LowGQ END=102003825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr2 102003826 . A . PASS END=102003826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 102003827 . G . PASS END=102003828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 102003829 . C . LowGQ END=102003829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr2 102003830 . C . PASS END=102003830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 102003831 . G . PASS END=102003834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 102003835 . C . LowGQ END=102003836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr2 102003837 . G . PASS END=102003837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 102003838 . G . PASS END=102003841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 102003842 . C . PASS END=102003842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 102003843 . A . PASS END=102003843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr2 102003844 . G . PASS END=102003845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 102003846 . A . PASS END=102003847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 102003848 . G . LowGQ END=102003848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:9,0 chr2 102003849 . G . PASS END=102003850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:13:0,23,405:0,23,255:9,0 chr2 102003851 . G . LowGQ END=102003851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:8,0 chr2 102003852 . C . PASS END=102003852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 102003853 . T . PASS END=102003854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 102003855 . C . PASS END=102003856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 102003857 . G . LowGQ END=102003857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:8,0 chr2 102003858 . C . PASS END=102003858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 102003859 . A . PASS END=102003862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:11:9:0,11,294:0,11,255:8,0 chr2 102003863 . C . PASS END=102003863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 102003864 . A . PASS END=102003864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 102003865 . G . PASS END=102003865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 102003866 . C . PASS END=102003867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr2 102003868 . A . LowGQ END=102003868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,263:12,0,255:5,0 chr2 102003869 . G . PASS END=102003872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,270:0,11,255:6,0 chr2 102003873 . A . PASS END=102003875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 102003876 . C . PASS END=102003876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 102003877 . G . LowGQ END=102003880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,139:0,0,173:4,0 chr2 102003881 . C . PASS END=102003883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:5,0 chr2 102003884 . C . LowGQ END=102003886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,139:0,0,173:3,0 chr2 102003887 . C . PASS END=102003888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:4,0 chr2 102003889 . G . LowGQ END=102003889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:21,0,154:3,0 chr2 102003890 . C . PASS END=102003890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr2 102003891 . G . PASS END=102003891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:3,0 chr2 102003892 . C . PASS END=102003908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:6,0 chr2 102003909 . C . PASS END=102003914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,202:3,0 chr2 102003915 . G . PASS END=102003917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr2 102003918 . A . LowDepth END=102003942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:2,0 chr2 102003943 . C . LowDepth END=102003958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:2,0 chr2 102003959 . C . PASS END=102003973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 102003974 . G . PASS END=102004001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr2 102004002 . C . PASS END=102004025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:13,0 chr2 102004026 . C . PASS END=102004027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 102004028 . C . PASS END=102004028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 102004029 . C . PASS END=102004060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,476:0,42,255:19,0 chr2 102004061 . A . PASS END=102004093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,839:0,66,255:25,0 chr2 102004094 . C . PASS END=102004094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 102004095 . T . PASS END=102004128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr2 102004129 . C . PASS END=102004129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 102004130 . G . PASS END=102004142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,809:0,69,255:23,0 chr2 102004143 . A . PASS END=102004144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr2 102014010 . T . PASS END=102014043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1192:0,83,255:40,0 chr2 102014044 . T . PASS END=102014044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1515:0,77,255:40,0 chr2 102014045 . C . PASS END=102014186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:31:0,81,1215:0,93,255:40,0 chr2 102018898 . C . PASS END=102018903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 102018904 . G . PASS END=102018907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 102018908 . A G, 91.69 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,9,0:0,6,0:42:129,45,0,552,45,552:255,45,0:0,0:9.1688e+01,4.1688e+01,2.9433e-04,4.5000e+02,7.6458e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,7:0,0,6,9 chr2 102018909 . T . PASS END=102018917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:18,0 chr2 102018918 . C . PASS END=102018920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 102018921 . C . PASS END=102018921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 102018922 . C . PASS END=102018934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:24,0 chr2 102018935 . A . PASS END=102018935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 102018936 . T . PASS END=102018945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 102018946 . C . PASS END=102018946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 102018947 . A . PASS END=102018957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:29,0 chr2 102018958 . A . PASS END=102018958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 102018959 . C . PASS END=102018975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1070:0,87,255:29,0 chr2 102018976 . C . PASS END=102018976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 102018977 . T . PASS END=102019127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1156:0,81,255:40,2 chr2 102019128 . C . PASS END=102019128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:31:50:0,31,1565:0,31,255:40,2 chr2 102019129 . C . PASS END=102019129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:25:50:0,25,1509:0,25,255:40,2 chr2 102019130 . T . PASS END=102019175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1177:0,80,255:40,0 chr2 102019176 . T . PASS END=102019176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr2 102019177 . A . PASS END=102019195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 102019196 . T . PASS END=102019196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 102019197 . G . PASS END=102019199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 102019200 . A . PASS END=102019214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 102022405 . C . PASS END=102022405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 102022406 . A . PASS END=102022406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 102022407 . A . PASS END=102022407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 102022408 . A . PASS END=102022410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 102022411 . T . PASS END=102022411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:27,0 chr2 102022412 . A . PASS END=102022412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 102022413 . T . PASS END=102022413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:26,0 chr2 102022414 . C . PASS END=102022414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 102022415 . T . PASS END=102022415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 102022416 . C . PASS END=102022430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,999:0,90,255:35,0 chr2 102022431 . A . PASS END=102022431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:33,0 chr2 102022432 . T . PASS END=102022519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1130:0,85,255:39,0 chr2 102027081 . C . PASS END=102027096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,117,1697:0,117,255:40,0 chr2 102027097 . T . PASS END=102027175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,143,255:40,0 chr2 102029377 . A . PASS END=102029377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 102029378 . T . PASS END=102029382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 102029383 . T . PASS END=102029383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 102029384 . C . PASS END=102029386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 102029387 . T . PASS END=102029387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 102029388 . G . PASS END=102029532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:29:0,84,1072:0,87,255:40,0 chr2 102029533 . T . PASS END=102029533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:41:0,75,1125:0,123,255:25,0 chr2 102031316 . C . PASS END=102031374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,114,1719:0,114,255:40,0 chr2 102033996 . C . PASS END=102034005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,906:0,62,255:24,0 chr2 102034006 . G . PASS END=102034006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 102034007 . G . PASS END=102034010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 102034011 . T . PASS END=102034011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 102034012 . C . PASS END=102034020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr2 102034021 . G . PASS END=102034146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:33:0,85,1166:0,85,255:40,0 chr2 102035313 . C . PASS END=102035426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,99,1476:0,100,255:40,0 chr2 102038174 . T . PASS END=102038239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,148,255:40,0 chr2 102038824 . C . PASS END=102038848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,105,1681:0,105,255:40,0 chr2 102038849 . T A, 188.00 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,23,0:0,24,0:138:226,141,0,1785,141,1785:255,147,0:0,0:1.8800e+02,1.3800e+02,0.0000e+00,4.5000e+02,1.7277e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,20:0,0,25,22 chr2 102038850 . G . PASS END=102038886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,106,1731:0,106,255:40,0 chr2 102038887 . C . PASS END=102038931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,102,1530:0,108,255:40,0 chr2 102038932 . A . PASS END=102038932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr2 102038933 . C . PASS END=102038934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 102045418 . T . PASS END=102045481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,158,255:40,0 chr2 102067056 . C . PASS END=102067082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:64:0,120,1800:0,177,255:40,0 chr2 102067083 . T C, 272.72 PASS DP=75;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,75,0:1.000,0.000:75:0,38,0:0,37,0:223:310,226,0,2892,226,2892:255,229,0:0,0:2.7272e+02,2.2272e+02,0.0000e+00,4.5000e+02,2.5749e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,35:0,0,39,36 chr2 102067084 . A . PASS END=102067120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:76:0,120,1800:0,191,255:40,0 chr2 102067121 . A . PASS END=102067142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:73:0,120,1800:0,195,255:40,0 chr2 102068847 . C . PASS END=102068908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,120,1800:0,127,255:40,0 chr2 102083239 . C . PASS END=102083362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:34:0,90,1242:0,102,255:40,0 chr2 102090664 . C . PASS END=102090664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 102090665 . A . PASS END=102090665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr2 102090666 . C . PASS END=102090666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 102090667 . T . PASS END=102090668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,507:0,34,255:16,0 chr2 102090669 . G . PASS END=102090669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 102090670 . A . PASS END=102090670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 102090671 . T . PASS END=102090676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 102090677 . C . PASS END=102090678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 102090679 . C . PASS END=102090686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 102090687 . G . PASS END=102090687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,505:0,12,255:13,0 chr2 102090688 . C . PASS END=102090688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 102090689 . C . PASS END=102090690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 102090691 . C . PASS END=102090693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,553:0,37,255:14,0 chr2 102090694 . C . PASS END=102090703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr2 102090704 . C . PASS END=102090704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 102090705 . G . PASS END=102090705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102090706 . C . PASS END=102090706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:13,0 chr2 102090707 . T . PASS END=102090710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102090711 . C . PASS END=102090711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr2 102090712 . G . PASS END=102090715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 102090716 . A . LowGQ END=102090716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,347:8,0,255:11,0 chr2 102090717 . G . PASS END=102090723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 102090724 . A . PASS END=102090736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 102090737 . T . PASS END=102090737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 102091100 . C . PASS END=102091112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,115,1515:0,115,255:40,0 chr2 102091113 . G . PASS END=102091211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:37:0,84,1260:0,94,255:40,0 chr2 102314543 . A . PASS END=102314545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,458:0,42,255:14,0 chr2 102314546 . G . PASS END=102314546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr2 102314547 . C . PASS END=102314547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 102314548 . G . PASS END=102314548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr2 102314549 . A . PASS END=102314552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102314553 . A . PASS END=102314553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 102314554 . C . PASS END=102314554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102314555 . T . PASS END=102314555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 102314556 . C . PASS END=102314556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102314557 . C . PASS END=102314557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 102314558 . C . PASS END=102314584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr2 102314585 . C . PASS END=102314592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr2 102314593 . C . PASS END=102314599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:13:0,21,315:0,25,255:9,0 chr2 102314905 . A . PASS END=102314905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 102314906 . T . PASS END=102314908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:30,0 chr2 102314909 . T . PASS END=102314909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 102314910 . A . PASS END=102314927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1024:0,90,255:37,0 chr2 102314928 . T . PASS END=102314928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:36,0 chr2 102314929 . C . PASS END=102315000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:39:0,80,1460:0,80,255:40,0 chr2 102407182 . G . PASS END=102407238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:72:0,120,1800:0,178,255:40,0 chr2 102440390 . G . PASS END=102440508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:91:51:0,91,1710:0,91,255:40,0 chr2 102440509 . A . PASS END=102440509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:59:54:0,59,1608:0,59,255:34,0 chr2 102440510 . C . PASS END=102440515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:96:51:0,96,1440:0,98,255:36,0 chr2 102441781 . C . PASS END=102441891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:34:0,87,1263:0,89,255:40,0 chr2 102445966 . G . PASS END=102445966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 102445967 . G . PASS END=102446056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,1039:0,84,255:40,0 chr2 102448183 . T . PASS END=102448309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1163:0,80,255:40,0 chr2 102448310 . C . PASS END=102448313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:24,0 chr2 102450871 . A . PASS END=102450925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,134,255:40,0 chr2 102452362 . C . PASS END=102452440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:45:0,97,1621:0,97,255:40,0 chr2 102456281 . G . PASS END=102456444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,106,1582:0,106,255:40,0 chr2 102456445 . G . PASS END=102456445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1313:0,73,255:34,0 chr2 102456446 . A . PASS END=102456453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1204:0,100,255:36,0 chr2 102456454 . A . PASS END=102456454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1358:0,78,255:34,0 chr2 102456455 . A . PASS END=102456456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:34,0 chr2 102459071 . A . PASS END=102459143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:86:34:0,86,1217:0,86,255:40,0 chr2 102460563 . T . PASS END=102460700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:29:0,87,1080:0,87,255:40,0 chr2 102460701 . T . PASS END=102460701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:33,0 chr2 102460702 . A . PASS END=102460731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1197:0,91,255:36,0 chr2 102460732 . C . PASS END=102460732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr2 102460733 . G . PASS END=102460760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:34:0,93,1349:0,95,255:37,0 chr2 102460761 . A . PASS END=102460773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:26:0,60,900:0,78,255:26,0 chr2 102472439 . C . PASS END=102472557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:90:43:0,90,1462:0,90,255:40,0 chr2 102472558 . G . PASS END=102472558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,9:68:17:68:0,17,1521:0,17,255:40,0 chr2 102472559 . A . PASS END=102472559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 102472560 . G . LowGQ END=102472560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,11:67:0:67:0,0,1482:11,0,255:40,0 chr2 102472561 . A . PASS END=102472600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:94:57:0,94,1763:0,94,255:40,0 chr2 102475458 . G . PASS END=102475528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:32:0,92,1181:0,92,255:40,0 chr2 102475529 . G . PASS END=102475529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr2 102475530 . C . PASS END=102475544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,92,255:30,0 chr2 102476105 . G . PASS END=102476119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 102476120 . G . PASS END=102476120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 102476121 . A . PASS END=102476148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:21:0,61,672:0,61,255:26,0 chr2 102476149 . G . PASS END=102476177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr2 102476178 . C . PASS END=102476178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 102476179 . A . PASS END=102476247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1211:0,89,255:35,0 chr2 102476248 . G . PASS END=102476248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:33,0 chr2 102476249 . C . PASS END=102476255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1351:0,84,255:37,0 chr2 102476256 . A . PASS END=102476256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 102476257 . A . PASS END=102476292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,89,255:36,0 chr2 102476293 . A . PASS END=102476293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 102476294 . G . PASS END=102476294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 102476295 . C . PASS END=102476319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:25,0 chr2 102476320 . G . PASS END=102476320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 102476321 . C . PASS END=102476321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 102476322 . G . PASS END=102476326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,69,255:16,0 chr2 102477287 . G . PASS END=102477295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,832:0,69,255:24,0 chr2 102477296 . A . PASS END=102477296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 102477297 . G . PASS END=102477307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr2 102477308 . A . PASS END=102477318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr2 102477319 . C . PASS END=102477320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr2 102477321 . C . PASS END=102477321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr2 102477322 . C . PASS END=102477322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr2 102477323 . C . PASS END=102477323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr2 102477324 . C . PASS END=102477428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1186:0,83,255:40,0 chr2 102477429 . A . PASS END=102477441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:24:0,66,990:0,72,255:23,0 chr2 102477442 . G . PASS END=102477442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 102477443 . C . PASS END=102477443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 102477444 . C . PASS END=102477447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 102477448 . G . PASS END=102477448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 102480283 . G . PASS END=102480452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:30:0,83,1260:0,83,255:40,0 chr2 102480453 . G . PASS END=102480491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr2 102480492 . C . PASS END=102480508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,50,255:19,0 chr2 102480509 . C . PASS END=102480509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:15,0 chr2 102480510 . A . PASS END=102480513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:15,0 chr2 102481392 . G . PASS END=102481395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr2 102481396 . C . PASS END=102481396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 102481397 . T . PASS END=102481407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:29,0 chr2 102481408 . C . PASS END=102481408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 102481409 . A . PASS END=102481409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 102481410 . T . PASS END=102481410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 102481411 . C . PASS END=102481442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1172:0,89,255:34,0 chr2 102481443 . C . PASS END=102481481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr2 102481482 . C . PASS END=102481482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 102481483 . A . PASS END=102481498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:21,0 chr2 102482890 . C . PASS END=102483024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1180:0,83,255:40,0 chr2 102483025 . A . PASS END=102483035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:25,0 chr2 102483036 . T . PASS END=102483036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 102483037 . G . PASS END=102483041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 102483674 . C . PASS END=102483792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:60:0,120,1800:0,143,255:40,0 chr2 102484491 . G . PASS END=102484499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1665:0,117,255:39,0 chr2 102486084 . G . PASS END=102486087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 102486088 . T . PASS END=102486112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:18,0 chr2 102486113 . A . PASS END=102486113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr2 102486114 . G . PASS END=102486125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,587:0,54,255:19,0 chr2 102486126 . G . PASS END=102486126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 102486127 . T . PASS END=102486127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr2 102486128 . A . PASS END=102486142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 102486143 . A . PASS END=102486144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,550:0,46,255:19,0 chr2 102486145 . T . PASS END=102486146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 102486147 . A . PASS END=102486149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 102486150 . G . PASS END=102486152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 102486153 . T . PASS END=102486154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 102486155 . C . PASS END=102486158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 102486159 . T . PASS END=102486174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,631:0,43,255:19,0 chr2 102486175 . C . PASS END=102486180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 102486181 . C . PASS END=102486181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 102486182 . G . PASS END=102486183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 102486184 . C . PASS END=102486210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr2 102486211 . A . PASS END=102486211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:17,0 chr2 102486212 . G . PASS END=102486214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 102486215 . A . PASS END=102486215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:17,0 chr2 102486216 . G . PASS END=102486228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,665:0,41,255:17,0 chr2 102486229 . C . PASS END=102486229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 102486230 . C . PASS END=102486230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,0 chr2 102486231 . A . PASS END=102486232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 102486233 . C . PASS END=102486233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 102486234 . T . PASS END=102486234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 102486235 . C . PASS END=102486235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:12,0 chr2 102486236 . A . PASS END=102486241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,495:0,32,255:13,0 chr2 102486242 . A . PASS END=102486242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 102486243 . G . PASS END=102486248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr2 102486249 . A . PASS END=102486249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 102486250 . C . PASS END=102486259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 102486757 . G . PASS END=102486877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:38:0,87,1394:0,87,255:40,0 chr2 102487956 . A . PASS END=102487980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr2 102487981 . G . PASS END=102488030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1016:0,81,255:32,0 chr2 102488031 . C . PASS END=102488031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:30,0 chr2 102488032 . T . PASS END=102488046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:33:0,96,1440:0,99,255:35,0 chr2 102488047 . A . PASS END=102488047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr2 102488048 . T . PASS END=102488081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1180:0,85,255:33,0 chr2 102488082 . T . PASS END=102488082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1149:0,58,255:29,0 chr2 102488083 . C . PASS END=102488088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr2 102488089 . G . PASS END=102488089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:29,0 chr2 102488090 . C . PASS END=102488092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 102488093 . G . PASS END=102488115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:23:0,60,900:0,69,255:24,0 chr2 102488116 . A . PASS END=102488129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,49,255:17,0 chr2 102488130 . A . PASS END=102488139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr2 102488140 . C . PASS END=102488140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 102488141 . T . PASS END=102488141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:14,0 chr2 102488142 . A . PASS END=102488142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102488143 . A . PASS END=102488143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 102488144 . T . PASS END=102488144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 102488145 . G . PASS END=102488147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 102490109 . A . PASS END=102490226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:44:0,120,1800:0,125,255:40,0 chr2 102490544 . T . PASS END=102490560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1166:0,95,255:36,0 chr2 102490561 . G . PASS END=102490561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:35,0 chr2 102490562 . G . PASS END=102490714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:39:0,93,1451:0,93,255:40,0 chr2 102493465 . G . PASS END=102493608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:35:0,89,1255:0,89,255:40,0 chr2 102499013 . G . PASS END=102499147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:84:32:0,84,1260:0,92,255:40,0 chr2 102501649 . T . PASS END=102501749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,114,1710:0,131,255:40,0 chr2 102503550 . T . PASS END=102503557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:33:0,91,1242:0,91,255:35,0 chr2 102503558 . A . PASS END=102503558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:25:36:0,25,1067:0,25,255:30,0 chr2 102503559 . G . PASS END=102503723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:36:0,84,1260:0,91,255:40,0 chr2 102504240 . A . PASS END=102504396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:34:0,84,1260:0,102,255:40,0 chr2 102504397 . T . PASS END=102504399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 102505258 . C . PASS END=102505397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:89:35:0,89,1295:0,89,255:40,0 chr2 102507628 . G . PASS END=102507711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:38:0,93,1440:0,93,255:40,0 chr2 102608482 . A . PASS END=102608495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,103,1384:0,103,255:39,0 chr2 102615462 . A . PASS END=102615578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:50:0,120,1800:0,145,255:40,0 chr2 102616747 . A . PASS END=102616772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1125:0,83,255:33,0 chr2 102616773 . G . PASS END=102616773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:30,0 chr2 102616774 . A . PASS END=102616781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 102616782 . A . PASS END=102616782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr2 102616783 . C . PASS END=102616785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1217:0,96,255:32,0 chr2 102622987 . A . PASS END=102623004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:41:0,85,1458:0,85,255:40,0 chr2 102623005 . T C, 187.98 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,22,0:0,25,0:138:226,141,0,1766,141,1766:255,141,0:0,0:1.8798e+02,1.3798e+02,0.0000e+00,4.5000e+02,1.7275e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,20:0,0,26,21 chr2 102623006 . G . PASS END=102623042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,108,1508:0,108,255:40,0 chr2 102623043 . G . PASS END=102623054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:37:0,93,1395:0,95,255:37,0 chr2 102624977 . G . PASS END=102624988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1233:0,89,255:36,0 chr2 102624989 . T . PASS END=102624989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:35,0 chr2 102624990 . G . PASS END=102625101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:34:0,84,1260:0,102,255:40,0 chr2 102625102 . C . PASS END=102625104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:20,0 chr2 102626024 . G . PASS END=102626055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,582:0,45,255:19,0 chr2 102626056 . C . PASS END=102626062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 102626063 . A . PASS END=102626064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 102626065 . C . PASS END=102626070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 102626071 . T . PASS END=102626072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 102626073 . C . PASS END=102626094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:26,0 chr2 102626095 . G . PASS END=102626099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 102626100 . G . PASS END=102626102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 102626103 . G . PASS END=102626254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1186:0,86,255:40,0 chr2 102626255 . A . PASS END=102626255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:27,0 chr2 102626256 . G . PASS END=102626271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 102626272 . T . PASS END=102626283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,914:0,62,255:25,0 chr2 102626284 . A . PASS END=102626288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:47:25:0,47,855:0,47,255:19,0 chr2 102632333 . A . PASS END=102632513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:49:0,120,1800:0,124,255:40,0 chr2 102636100 . G . PASS END=102636108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr2 102636109 . C . PASS END=102636111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 102636112 . T . PASS END=102636112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 102636113 . T . PASS END=102636123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr2 102636124 . A . PASS END=102636124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 102636125 . A . PASS END=102636130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,888:0,84,255:28,0 chr2 102636131 . A . PASS END=102636131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 102636132 . A . PASS END=102636144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:30,0 chr2 102636145 . A . PASS END=102636145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 102636146 . G . PASS END=102636195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:30:0,83,1097:0,83,255:39,0 chr2 102636196 . T . PASS END=102636196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:32,0 chr2 102636197 . A . PASS END=102636232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1153:0,80,255:34,0 chr2 102636233 . A . PASS END=102636251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,908:0,61,255:25,0 chr2 102636252 . G . PASS END=102636274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 102637138 . T . PASS END=102637145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1499:0,112,255:40,0 chr2 102637514 . A . PASS END=102637524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:17,0 chr2 102637525 . C . PASS END=102637534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,839:0,61,255:26,0 chr2 102637535 . G . PASS END=102637535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 102637536 . C . PASS END=102637536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 102637537 . G . PASS END=102637645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1063:0,80,255:35,0 chr2 102637646 . A . PASS END=102637646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 102637647 . A . PASS END=102637647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,799:0,53,255:25,0 chr2 102637648 . A . PASS END=102637650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 102637651 . C . PASS END=102637677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1008:0,68,255:26,0 chr2 102637678 . G . PASS END=102637678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,786:0,31,255:23,0 chr2 102637679 . C . PASS END=102637690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 102637691 . A . PASS END=102637691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr2 102637692 . C . PASS END=102637692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 102637693 . A . PASS END=102637693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:22,0 chr2 102637694 . A . PASS END=102637694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 102637695 . C . PASS END=102637696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,726:0,55,255:21,0 chr2 102637697 . C . PASS END=102637697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 102637698 . A . PASS END=102637698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr2 102637699 . C . PASS END=102637705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr2 102637706 . C . PASS END=102637708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:23:0,42,630:0,53,255:16,0 chr2 102637709 . C . PASS END=102637715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr2 102638649 . A . PASS END=102638711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,164,255:40,0 chr2 102640995 . G . PASS END=102641044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:32:0,93,1233:0,96,255:38,0 chr2 102641045 . T . PASS END=102641045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:34,0 chr2 102641046 . T . PASS END=102641052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,99,1485:0,114,255:36,0 chr2 102641053 . C . PASS END=102641053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:35,0 chr2 102641054 . A . PASS END=102641088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:32:0,93,1166:0,96,255:37,0 chr2 102641089 . G . PASS END=102641089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 102641090 . A . PASS END=102641104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 102641105 . G . PASS END=102641127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr2 102641128 . C . PASS END=102641134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr2 102642573 . G . PASS END=102642601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,185,255:40,0 chr2 102642602 . T . PASS END=102642715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:62:0,120,1800:0,179,255:40,0 chr2 102644688 . C . PASS END=102644688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 102644689 . C . PASS END=102644723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1172:0,93,255:39,0 chr2 102644724 . C . PASS END=102644724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1201:0,69,255:37,0 chr2 102644725 . A . PASS END=102644757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1336:0,103,255:40,0 chr2 102644758 . A . PASS END=102644758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1258:0,70,255:36,0 chr2 102644759 . T . PASS END=102644796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1169:0,80,255:38,0 chr2 102644797 . A . PASS END=102644797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:30,0 chr2 102644798 . G . PASS END=102644807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1172:0,83,255:30,0 chr2 102644808 . C . PASS END=102644816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,83,255:25,0 chr2 102644817 . G . PASS END=102644817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1019:0,51,255:20,0 chr2 102644818 . G . PASS END=102644824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 102644825 . C . PASS END=102644825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:18,0 chr2 102644826 . A . PASS END=102644826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 102644827 . T . PASS END=102644827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:18,0 chr2 102644828 . C . PASS END=102644835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr2 102644836 . T . PASS END=102644836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:13,0 chr2 102644837 . C . PASS END=102644854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:12:0,30,450:0,36,255:13,0 chr2 102774185 . A . PASS END=102774245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,188,255:40,0 chr2 102781234 . A . PASS END=102781468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,105,1575:0,113,255:40,0 chr2 102781575 . A . PASS END=102781583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:37,0 chr2 102781584 . T . PASS END=102781584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1348:0,67,255:35,0 chr2 102781585 . T . PASS END=102781779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:37:0,107,1291:0,107,255:40,0 chr2 102782573 . G . PASS END=102782720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:44:0,120,1800:0,122,255:40,0 chr2 102782721 . T . PASS END=102782721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,10:82:79:82:0,79,2104:0,79,255:40,0 chr2 102782722 . A . PASS END=102782741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,197,255:40,0 chr2 102785058 . A . PASS END=102785120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1186:0,81,255:40,0 chr2 102785121 . T . PASS END=102785123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:34,0 chr2 102788261 . G . PASS END=102788371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,135,255:40,0 chr2 102788372 . A . PASS END=102788378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,111,1665:0,140,255:40,0 chr2 102789147 . T . PASS END=102789298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:37:0,102,1575:0,102,255:40,0 chr2 102791047 . T . PASS END=102791190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:93:38:0,93,1366:0,93,255:40,0 chr2 102791938 . C . PASS END=102791946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,945:0,65,255:26,0 chr2 102791947 . G . PASS END=102791947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr2 102791948 . A . PASS END=102791950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 102791951 . G . PASS END=102791951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 102791952 . A . PASS END=102792146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:80:32:0,80,1085:0,80,255:40,0 chr2 102792813 . A . PASS END=102793214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:36:0,84,1260:0,92,255:40,0 chr2 102793215 . G . PASS END=102793215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:28,0 chr2 102793216 . G . PASS END=102793219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1233:0,86,255:30,0 chr2 102803475 . A . PASS END=102803482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr2 102803483 . G . PASS END=102803509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 102803510 . C . PASS END=102803546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr2 102803582 . A . PASS END=102803586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 102803587 . T . PASS END=102803593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 102803594 . C . PASS END=102803600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 102803601 . T . PASS END=102803605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 102803606 . G . PASS END=102803623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 102803624 . C . PASS END=102803632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr2 102803633 . A . PASS END=102803633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,454:0,31,255:15,0 chr2 102803634 . A . PASS END=102803659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:16:0,44,582:0,44,255:19,0 chr2 102803660 . A . PASS END=102803664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 102803665 . C . PASS END=102803665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr2 102803666 . C . PASS END=102803685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 102803686 . G . PASS END=102803701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,47,255:19,0 chr2 102803702 . G . PASS END=102803718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 102803719 . T . PASS END=102803721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 102803722 . G . PASS END=102803723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 102803724 . C . PASS END=102803725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 102803726 . A . PASS END=102803726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr2 102803727 . G . PASS END=102803742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr2 102803743 . C . PASS END=102803743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 102803744 . T . PASS END=102803770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 102803771 . T . PASS END=102803802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,631:0,43,255:19,0 chr2 102804316 . C . PASS END=102804385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,112,1421:0,112,255:40,0 chr2 102805536 . A . PASS END=102805545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 102805546 . G . PASS END=102805546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 102805547 . G . PASS END=102805547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,1 chr2 102805548 . A . PASS END=102805569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:32:0,61,1070:0,61,255:36,1 chr2 102805570 . A . PASS END=102805756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,82,255:40,0 chr2 102805757 . C . PASS END=102805758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 102805759 . A . PASS END=102805759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1123:0,55,255:24,0 chr2 102805760 . T . PASS END=102805770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:24,0 chr2 102808385 . G . PASS END=102808569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:41:0,105,1363:0,110,255:40,0 chr2 102808570 . A . PASS END=102808580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:38:0,72,1080:0,90,255:26,0 chr2 102818016 . G . PASS END=102818175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1215:0,89,255:40,0 chr2 102828560 . C . PASS END=102828634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:70:0,120,1800:0,210,255:40,0 chr2 102835413 . G . PASS END=102835542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:43:0,113,1550:0,113,255:40,0 chr2 102836341 . A . PASS END=102836477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,114,1673:0,114,255:40,0 chr2 102842358 . C . PASS END=102842496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:98:43:0,98,1462:0,98,255:40,0 chr2 102842497 . A . PASS END=102842501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:75:43:0,75,1125:0,129,255:26,0 chr2 102849423 . A . PASS END=102849429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 102849430 . G . PASS END=102849439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,821:0,63,255:26,0 chr2 102849440 . G . PASS END=102849533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:29:0,83,1116:0,83,255:40,0 chr2 102849534 . A . PASS END=102849534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:29,0 chr2 102849535 . A . PASS END=102849549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1088:0,90,255:31,0 chr2 102849550 . G . PASS END=102849550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 102849551 . T . PASS END=102849555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1058:0,90,255:30,0 chr2 102849556 . A . PASS END=102849556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 102849557 . T . PASS END=102849562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 102849563 . A . PASS END=102849563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 102849564 . G . PASS END=102849565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 102849566 . G . PASS END=102849566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,940:0,70,255:26,0 chr2 102849567 . A . PASS END=102849567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 102849568 . T . PASS END=102849568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 102849569 . G . PASS END=102849572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 102849573 . T . PASS END=102849584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr2 102851357 . C . PASS END=102851364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 102851365 . A . PASS END=102851365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 102851366 . A . PASS END=102851390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:26,0 chr2 102851391 . G . PASS END=102851794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:32:0,83,1188:0,83,255:40,0 chr2 102851795 . G . PASS END=102851795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1426:0,57,255:35,0 chr2 102851796 . T . PASS END=102851805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1268:0,87,255:36,0 chr2 102851806 . C . PASS END=102851806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:31,0 chr2 102851807 . A . PASS END=102851821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1141:0,80,255:32,0 chr2 102851822 . C . PASS END=102851822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:26,0 chr2 102851823 . G . PASS END=102851824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 102851825 . T . PASS END=102851847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 102855351 . G . PASS END=102855358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,984:0,81,255:30,0 chr2 102855359 . T . PASS END=102855359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 102855360 . G . PASS END=102855361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 102855362 . A . PASS END=102855362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 102855363 . G . PASS END=102855404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1117:0,82,255:33,0 chr2 102855405 . T . PASS END=102855405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 102855406 . G . PASS END=102855414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 102855415 . A . PASS END=102855442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 102855652 . G . PASS END=102855701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,125,255:40,0 chr2 102859098 . G . PASS END=102859156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,116,1755:0,116,255:40,0 chr2 102954725 . A . PASS END=102954785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,1:111:99:94:0,120,1800:0,255,255:40,0 chr2 102955297 . G . PASS END=102955430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:33:0,81,977:0,81,255:40,0 chr2 102955431 . T . PASS END=102955467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,126,255:40,0 chr2 102955468 . C A, 203.51 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,21,0:0,31,0:154:241,157,0,2016,157,2016:255,156,0:0,0:2.0351e+02,1.5351e+02,0.0000e+00,4.5000e+02,1.8828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,31:0,0,26,26 chr2 102955469 . A . PASS END=102955505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:36:0,87,1305:0,108,255:40,0 chr2 102955506 . A . PASS END=102955507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:29,0 chr2 102956558 . T . PASS END=102956732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:91:47:0,91,1427:0,91,255:40,0 chr2 102957126 . A . PASS END=102957284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:32:0,86,1150:0,86,255:40,0 chr2 102957285 . A . PASS END=102957285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1321:0,73,255:28,0 chr2 102957286 . A . PASS END=102957288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:39:0,90,1350:0,101,255:30,0 chr2 102957648 . T . PASS END=102957650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,502:0,46,255:19,0 chr2 102957651 . G . PASS END=102957651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,647:0,24,255:19,0 chr2 102957652 . G . PASS END=102957653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:21,0 chr2 102957654 . G . PASS END=102957654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 102957655 . T . PASS END=102957655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 102957656 . C . PASS END=102957656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 102957657 . A . PASS END=102957657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr2 102957658 . G . PASS END=102957658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr2 102957659 . A . PASS END=102957659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 102957660 . G . PASS END=102957660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 102957661 . T . PASS END=102957661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 102957662 . T . PASS END=102957662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr2 102957663 . T . PASS END=102957663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 102957664 . C . PASS END=102957664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,717:0,30,255:22,0 chr2 102957665 . T . PASS END=102957665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 102957666 . G . PASS END=102957666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 102957667 . C . PASS END=102957667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr2 102957668 . A . PASS END=102957668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 102957669 . A . PASS END=102957670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 102957671 . T . PASS END=102957671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,743:0,25,255:21,0 chr2 102957672 . T . PASS END=102957672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,74,255:23,0 chr2 102957673 . A . PASS END=102957673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:23,0 chr2 102957674 . A . PASS END=102957674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,845:0,44,255:23,0 chr2 102957675 . A . PASS END=102957676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 102957677 . A . PASS END=102957677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr2 102957678 . A . PASS END=102957678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 102957679 . G . PASS END=102957679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,748:0,33,255:23,0 chr2 102957680 . A . PASS END=102957680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:21,0 chr2 102957681 . G . PASS END=102957682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:23,0 chr2 102957683 . T . PASS END=102957683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,764:0,36,255:23,0 chr2 102957684 . T . PASS END=102957684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr2 102957685 . A . PASS END=102957686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:23,0 chr2 102957687 . T . PASS END=102957687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr2 102957688 . C . PASS END=102957692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,846:0,61,255:24,0 chr2 102957693 . G . PASS END=102957694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:23,0 chr2 102957695 . A . PASS END=102957695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,790:0,28,255:22,0 chr2 102957696 . A . PASS END=102957696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:23,0 chr2 102957697 . T . PASS END=102957698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,821:0,45,255:23,0 chr2 102957699 . C . PASS END=102957699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:30:26:0,30,756:0,30,255:23,0 chr2 102957700 . T . PASS END=102957700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,829:0,23,255:22,0 chr2 102957701 . C . PASS END=102957701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:23,0 chr2 102957702 . A . PASS END=102957702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:23,0 chr2 102957703 . T . PASS END=102957703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 102957704 . T . PASS END=102957704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 102957705 . G . PASS END=102957706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr2 102957707 . A . PASS END=102957707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 102957708 . T . PASS END=102957718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:26,0 chr2 102957719 . A . PASS END=102957721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 102957722 . A . PASS END=102957722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 102957723 . G . PASS END=102957723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 102957724 . A . PASS END=102957724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,776:0,31,255:24,0 chr2 102957725 . G . PASS END=102957726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 102957727 . C . PASS END=102957728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,796:0,64,255:26,0 chr2 102957729 . T . PASS END=102957732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 102957733 . G . PASS END=102957735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 102957736 . G . PASS END=102957741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:29:0,60,900:0,86,255:26,0 chr2 102957742 . C . PASS END=102957742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,98,255:26,0 chr2 102957743 . T . PASS END=102957755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,80,255:26,0 chr2 102957756 . A . PASS END=102957777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr2 102957778 . T . PASS END=102957779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,848:0,64,255:26,0 chr2 102957780 . T . PASS END=102957784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 102957785 . T . PASS END=102957785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 102957786 . T . PASS END=102957791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:28,0 chr2 102957792 . A . PASS END=102957793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:27,0 chr2 102957794 . T . PASS END=102957796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 102957797 . C . PASS END=102957797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,870:0,51,255:26,0 chr2 102957798 . A . PASS END=102957801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,906:0,81,255:28,0 chr2 102957802 . T . PASS END=102957802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,901:0,67,255:26,0 chr2 102957803 . C . PASS END=102957804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 102957805 . T . PASS END=102957805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:26,0 chr2 102957806 . C . PASS END=102957807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 102957808 . A . PASS END=102957817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,881:0,67,255:24,0 chr2 102958683 . A . PASS END=102958754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:36:0,108,1293:0,108,255:40,0 chr2 102959496 . G . PASS END=102959498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1273:0,108,255:36,0 chr2 102959499 . A . PASS END=102959499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1255:0,53,255:34,0 chr2 102959500 . A . PASS END=102959637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1281:0,93,255:40,0 chr2 102959730 . T . PASS END=102959892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:39:0,90,1350:0,117,255:40,0 chr2 102964405 . T . PASS END=102964407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,922:0,84,255:28,0 chr2 102964408 . A . PASS END=102964409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 102964410 . C . PASS END=102964551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:28:0,84,966:0,84,255:40,0 chr2 102965539 . A . PASS END=102965706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:89:33:0,89,1255:0,89,255:40,0 chr2 102967996 . A . PASS END=102968006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr2 102968007 . G A, 142.85 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,16,0:0,16,0:93:181,96,0,1211,96,1211:255,99,0:0,0:1.4285e+02,9.2854e+01,0.0000e+00,4.5000e+02,1.2762e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,13:0,0,13,19 chr2 102968008 . C . PASS END=102968074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:32:0,83,1158:0,83,255:39,0 chr2 102968075 . T C, 173.41 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,22,0:0,20,0:123:211,126,0,1620,126,1620:255,126,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,20:0,0,28,14 chr2 102968076 . A . PASS END=102968112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1530:0,126,255:40,0 chr2 102968113 . G . PASS END=102968157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,88,255:40,0 chr2 102968158 . A . PASS END=102968168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:25,0 chr2 102968169 . G . PASS END=102968195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr2 102968196 . C . PASS END=102968199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 102968200 . A . PASS END=102968205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 102968206 . C . PASS END=102968210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1247:0,86,255:32,0 chr2 102968211 . C A, 141.38 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,33,0:1.000,0.000:33:0,18,0:0,15,0:91:179,94,0,279,279,279:255,102,0:0,0:1.4138e+02,9.1385e+01,0.0000e+00,2.7615e+02,3.1092e+02,2.7917e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,24,9:0,0,17,16:102968211 chr2 102968212 . A G, 141.55 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,33,0:1.000,0.000:33:0,18,0:0,15,0:92:179,95,0,279,279,279:255,102,0:0,0:1.4155e+02,9.1548e+01,0.0000e+00,2.7632e+02,3.1109e+02,2.7933e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,24,9:0,0,17,16:102968211 chr2 102968213 . G . PASS END=102968226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1227:0,88,255:33,0 chr2 102968227 . T . PASS END=102968227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1218:0,53,255:31,0 chr2 102968228 . A . PASS END=102968284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1305:0,92,255:40,0 chr2 102968285 . T C, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,23,0:0,18,0:120:208,123,0,1590,123,1590:255,126,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,18:0,0,17,24 chr2 102968286 . A . PASS END=102968355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:42:0,93,1395:0,109,255:40,0 chr2 102968356 . C T, 165.63 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,41,0:1.000,0.000:41:0,25,0:0,16,0:116:203,119,0,303,303,303:255,126,0:0,0:1.6563e+02,1.1563e+02,0.0000e+00,3.0040e+02,3.3517e+02,3.0341e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,30:0,0,17,24:102968356 chr2 102968357 . T . PASS END=102968361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:39:0,88,1519:0,88,255:34,0 chr2 102968362 . T C, 162.61 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,39,0:1.000,0.000:39:0,23,0:0,16,0:113:200,116,0,300,300,300:255,117,0:0,0:1.6261e+02,1.1261e+02,0.0000e+00,2.9738e+02,3.3215e+02,3.0039e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,28:0,0,17,22:102968356 chr2 102968363 . G . PASS END=102968381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:35,0 chr2 102974129 . C . PASS END=102974129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 102975336 . T . PASS END=102975336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 102979121 . A . PASS END=102979178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,105,1575:0,137,255:40,0 chr2 102984285 . A . PASS END=102984285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 102984286 . A . PASS END=102984293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:18,0 chr2 102984294 . C . PASS END=102984299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 102984300 . G . PASS END=102984300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 102984301 . T . PASS END=102984305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 102984306 . A . PASS END=102984308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 102984309 . T . PASS END=102984309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 102984310 . T . PASS END=102984528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:87:30:0,87,1305:0,90,255:40,0 chr2 102988413 . A . PASS END=102988568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:56:0,117,1755:0,165,255:40,0 chr2 102988569 . A . PASS END=102988578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:60:41:0,60,900:0,109,255:25,0 chr2 102992367 . A . PASS END=102992377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1175:0,91,255:36,0 chr2 102992378 . G . PASS END=102992378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1379:0,73,255:35,0 chr2 102992379 . C . PASS END=102992392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:41:0,93,1346:0,93,255:40,0 chr2 102992393 . C . PASS END=102992393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1444:0,69,255:40,0 chr2 102992394 . A . PASS END=102992516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:39:0,81,1215:0,90,255:40,0 chr2 102992517 . G . PASS END=102992523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:30:0,69,1035:0,90,255:26,0 chr2 102998080 . A . PASS END=102998142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:82:0,120,1800:0,228,255:40,0 chr2 103001338 . G . PASS END=103001458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:54:0,120,1800:0,146,255:40,0 chr2 103003321 . G . PASS END=103003460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:90:40:0,90,1401:0,90,255:40,0 chr2 103006516 . C . PASS END=103006516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 103006517 . A . PASS END=103006517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 103006518 . G . PASS END=103006520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1048:0,90,255:30,0 chr2 103006521 . A . PASS END=103006521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr2 103006522 . T . PASS END=103006745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:93:31:0,93,1138:0,93,255:40,0 chr2 103010929 . A . PASS END=103010949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,111,1621:0,111,255:40,0 chr2 103010950 . T . PASS END=103011080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:87:41:0,87,1305:0,119,255:40,0 chr2 103011081 . G . PASS END=103011084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:57:37:0,57,855:0,111,255:19,0 chr2 103011085 . G . PASS END=103011085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:60:36:0,60,900:0,92,255:19,0 chr2 103011086 . A . PASS END=103011087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:31:0,51,765:0,93,255:17,0 chr2 103012991 . C . PASS END=103013025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1102:0,80,255:38,0 chr2 103013026 . A . PASS END=103013026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr2 103013027 . G . PASS END=103013337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:32:0,86,1186:0,86,255:40,0 chr2 103013338 . G . PASS END=103013346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:26,0 chr2 103039738 . A . PASS END=103039807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:80:0,120,1800:0,220,255:40,0 chr2 103040271 . G . PASS END=103040279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1077:0,96,255:34,0 chr2 103040280 . C . PASS END=103040280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:29,0 chr2 103040281 . A . PASS END=103040287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:33,0 chr2 103040288 . C . PASS END=103040288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1129:0,71,255:33,0 chr2 103040289 . T . PASS END=103040290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:34:0,102,1211:0,102,255:37,0 chr2 103040291 . C . PASS END=103040291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1090:0,61,255:34,0 chr2 103040292 . T . PASS END=103040293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1317:0,95,255:37,0 chr2 103040294 . T . PASS END=103040375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1207:0,81,255:40,0 chr2 103040376 . G . PASS END=103040376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:72:52:0,72,1278:0,72,255:38,0 chr2 103040377 . A . PASS END=103040595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,120,1800:0,130,255:40,0 chr2 103040691 . G . PASS END=103040874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:90:43:0,90,1440:0,90,255:40,0 chr2 103053672 . A . PASS END=103053802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:34:0,99,1380:0,101,255:40,0 chr2 103053803 . T . PASS END=103053803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:33,0 chr2 103053804 . G . PASS END=103053817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,95,255:34,0 chr2 103053818 . C . PASS END=103053822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 103057772 . T . PASS END=103057837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:97:47:0,97,1698:0,97,255:40,0 chr2 103059660 . G . PASS END=103059783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:32:0,88,1194:0,88,255:40,0 chr2 103060491 . A . PASS END=103060552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,161,255:40,0 chr2 103061649 . T . PASS END=103061800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,113,1507:0,113,255:40,0 chr2 103063530 . T . PASS END=103063534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr2 103063535 . C . PASS END=103063535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:27,0 chr2 103063536 . T . PASS END=103063557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1078:0,84,255:35,0 chr2 103063558 . C . PASS END=103063618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1119:0,92,255:37,0 chr2 103063619 . A . PASS END=103063619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 103063620 . T . PASS END=103063626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 103063627 . G . PASS END=103063642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:24,0 chr2 103063643 . C . PASS END=103063660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,751:0,47,255:19,0 chr2 103063661 . C . PASS END=103063661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 103063662 . T . PASS END=103063667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr2 103067308 . A . PASS END=103067309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1156:0,83,255:33,0 chr2 103067310 . A . PASS END=103067310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:31,0 chr2 103067311 . A . PASS END=103067323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1122:0,82,255:33,0 chr2 103067324 . T . PASS END=103067324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr2 103067325 . G . PASS END=103067441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:33:0,81,1211:0,99,255:40,0 chr2 103067442 . A . PASS END=103067466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:24:0,61,908:0,61,255:26,0 chr2 103067467 . T . PASS END=103067472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:16,0 chr2 103067473 . C . PASS END=103067478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,47,255:13,0 chr2 103067479 . G . PASS END=103067481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 103068226 . T . PASS END=103068595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:38:0,81,1215:0,98,255:40,0 chr2 103068596 . T . PASS END=103068611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:26,0 chr2 103068612 . G . PASS END=103068626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 103068627 . C . PASS END=103068629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:16,0 chr2 103068630 . A . PASS END=103068641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 103090219 . A . PASS END=103090222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 103090223 . C . PASS END=103090440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,986:0,81,255:40,0 chr2 103090441 . C . PASS END=103090458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,900:0,62,255:25,0 chr2 103090459 . T . PASS END=103090459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,753:0,17,255:20,0 chr2 103090460 . C . PASS END=103090461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 103090462 . C . PASS END=103090462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 103090463 . T . PASS END=103090465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 103090466 . C . PASS END=103090474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,662:0,46,255:19,0 chr2 103095298 . G . PASS END=103095300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 103095301 . T . PASS END=103095305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 103095306 . C . PASS END=103095339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,62,255:26,0 chr2 103095340 . G . PASS END=103095342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1015:0,84,255:28,0 chr2 103095343 . G . PASS END=103095343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 103095344 . C . PASS END=103095350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 103095351 . A . PASS END=103095351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 103095352 . T . PASS END=103095366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr2 103095367 . T . PASS END=103095387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1176:0,83,255:35,0 chr2 103095388 . G . PASS END=103095388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:31,0 chr2 103095389 . C . PASS END=103095400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1197:0,83,255:33,0 chr2 103095401 . A . PASS END=103095401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1003:0,66,255:30,0 chr2 103095402 . T . PASS END=103095403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 103095404 . G A, 142.83 PASS DP=32;MQ=249.20;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,15,0:0,17,0:93:181,96,0,281,281,281:255,99,0:0,0:1.4283e+02,9.2831e+01,0.0000e+00,2.7760e+02,3.1237e+02,2.8061e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,9,23:0,0,20,12 chr2 103095405 . C . PASS END=103095406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr2 103095407 . T . PASS END=103095407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr2 103095408 . C . PASS END=103095426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1174:0,85,255:34,0 chr2 103095427 . T . PASS END=103095427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:31,0 chr2 103095428 . C . PASS END=103095432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1186:0,86,255:33,0 chr2 103095433 . T . PASS END=103095433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:31,0 chr2 103095434 . C . PASS END=103095441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1282:0,94,255:36,0 chr2 103095442 . T . PASS END=103095470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1189:0,86,255:35,0 chr2 103095471 . T . PASS END=103095472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1066:0,79,255:26,0 chr2 103095473 . C . PASS END=103095477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 103095478 . T . PASS END=103095487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 103095488 . G . PASS END=103095490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 103095491 . C . PASS END=103095500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 103095501 . A . PASS END=103095501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,856:0,42,255:24,0 chr2 103095502 . A . PASS END=103095507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:25,0 chr2 103095508 . G . PASS END=103095508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:24,0 chr2 103095509 . C . PASS END=103095528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,68,255:25,0 chr2 103095529 . T . PASS END=103095529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:23,0 chr2 103095530 . A . PASS END=103095543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:25,0 chr2 103095544 . T . PASS END=103095544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 103095545 . C . PASS END=103095550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 103095551 . C . PASS END=103095555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 103095556 . G . PASS END=103095559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 103095560 . T . PASS END=103095568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,654:0,46,255:19,0 chr2 103095569 . C . PASS END=103095572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 103095573 . T . PASS END=103095573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 103095574 . A . PASS END=103095614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:22,0 chr2 103095615 . A . PASS END=103095615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 103095616 . A . PASS END=103095617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 103095618 . C . PASS END=103095619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr2 103095620 . G . PASS END=103095646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,929:0,62,255:26,0 chr2 103095647 . G . PASS END=103095647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 103095648 . A . PASS END=103095648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 103095649 . T . PASS END=103095649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:23,0 chr2 103095650 . C . PASS END=103095653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 103095654 . G . PASS END=103095655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 103095656 . C . PASS END=103095656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 103095657 . G . PASS END=103095664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 103095665 . A . PASS END=103095665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 103095666 . G . PASS END=103095668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 103095669 . G . PASS END=103095669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 103095670 . C . PASS END=103095676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:30,0 chr2 103095677 . A . PASS END=103095677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr2 103095678 . G . PASS END=103095716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,86,255:33,0 chr2 103095717 . A . PASS END=103095719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1124:0,77,255:27,0 chr2 103095720 . A . PASS END=103095720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 103095721 . T . PASS END=103095721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 103095722 . G . PASS END=103095723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 103095724 . T . PASS END=103095724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:26,0 chr2 103095725 . C . PASS END=103095738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,988:0,84,255:28,0 chr2 103095739 . T . PASS END=103095739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 103095740 . G . PASS END=103095745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 103095746 . T . PASS END=103095754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,67,255:26,0 chr2 103095755 . T . PASS END=103095755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,922:0,37,255:19,0 chr2 103095756 . A . PASS END=103095756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 103095757 . C . PASS END=103095757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:20,0 chr2 103095758 . T . PASS END=103095761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:20,0 chr2 103119907 . G . PASS END=103120166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:29:0,84,1260:0,87,255:40,0 chr2 103121713 . A . PASS END=103121713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 103121714 . A . PASS END=103121719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 103121720 . G . PASS END=103121720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 103121721 . C . PASS END=103121748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:31:0,86,1144:0,86,255:37,0 chr2 103121749 . G . PASS END=103121749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:35,0 chr2 103121750 . G . PASS END=103121753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:37:0,83,1345:0,83,255:38,0 chr2 103121754 . A . PASS END=103121754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1236:0,75,255:37,0 chr2 103121755 . A . PASS END=103121911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1215:0,84,255:40,0 chr2 103121912 . C . PASS END=103121926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,963:0,65,255:25,0 chr2 103121927 . A . PASS END=103121930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr2 103124538 . G . PASS END=103124736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:81:36:0,81,1184:0,91,255:40,2 chr2 103124737 . T . PASS END=103124740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:30:0,72,1080:0,86,255:26,0 chr2 103125306 . G . PASS END=103125392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,164,255:40,0 chr2 103128662 . C . PASS END=103128728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,91,255:40,0 chr2 103128729 . A . PASS END=103128729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:25,0 chr2 103128730 . C . PASS END=103128730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 103128731 . A . PASS END=103128732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:24,0 chr2 103130549 . G . PASS END=103130710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:44:0,108,1620:0,116,255:40,0 chr2 103136318 . G . PASS END=103136346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,120,1800:0,125,255:40,0 chr2 103136347 . T . PASS END=103136408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,109,1789:0,109,255:40,0 chr2 103136409 . C . PASS END=103136414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,128,255:40,0 chr2 103141483 . A . PASS END=103141484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,125,255:40,0 chr2 103141485 . C . PASS END=103141613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,105,1575:0,114,255:40,0 chr2 103141614 . G . PASS END=103141614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,108,1620:0,132,255:36,0 chr2 103142718 . G . PASS END=103142805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,102,1530:0,106,255:40,0 chr2 103148789 . A . PASS END=103149062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:33:0,87,1203:0,87,255:40,0 chr2 103149063 . T . PASS END=103149079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,101,1368:0,101,255:38,0 chr2 103149080 . G . PASS END=103149080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr2 103149081 . G . PASS END=103149099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1305:0,98,255:37,0 chr2 103149100 . G A, 148.42 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:98:186,101,0,1244,101,1244:255,105,0:0,0:1.4842e+02,9.8416e+01,0.0000e+00,4.5000e+02,1.3319e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,25:0,0,15,19 chr2 103149101 . G . PASS END=103149101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:29,0 chr2 103149102 . C . PASS END=103149104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:29,0 chr2 103149105 . G . PASS END=103149115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr2 103149116 . G . PASS END=103149147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,629:0,51,255:18,0 chr2 103236308 . A . PASS END=103236353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 103236354 . C . PASS END=103236364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 103236365 . C . PASS END=103236365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 103236366 . T . PASS END=103236367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 103236368 . C . PASS END=103236368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 103236369 . T . PASS END=103236402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 103236403 . G . PASS END=103236409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 103236410 . A . PASS END=103236438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:19,0 chr2 103236439 . C . PASS END=103236442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 103236443 . A . PASS END=103236443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 103236444 . G . PASS END=103236447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 103236448 . C . PASS END=103236453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 103236454 . G . PASS END=103236521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,826:0,62,255:26,0 chr2 103236522 . C . PASS END=103236522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr2 103236523 . G . PASS END=103236530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr2 103236531 . A . PASS END=103236531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 103236532 . C . PASS END=103236533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 103236534 . C . PASS END=103236535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 103236536 . C . PASS END=103236536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:19,0 chr2 103236537 . A . PASS END=103236556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:16:0,40,607:0,40,255:19,0 chr2 103236557 . A . PASS END=103236557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 103236558 . T . PASS END=103236564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr2 103236565 . T . PASS END=103236565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 103236566 . T . PASS END=103236569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 103236570 . T . PASS END=103236584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 103236585 . T . PASS END=103236585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:11,0 chr2 103236586 . G . PASS END=103236593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 103236594 . T . PASS END=103236594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 103236595 . T . PASS END=103236596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 103274023 . G . PASS END=103274023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 103274024 . C . PASS END=103274024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:27,0 chr2 103274025 . T . PASS END=103274028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 103274029 . A . PASS END=103274029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 103274030 . T . PASS END=103274030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,945:0,40,255:27,0 chr2 103274031 . C . PASS END=103274031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 103274032 . T . PASS END=103274032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:27,0 chr2 103274033 . G . PASS END=103274486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:32:0,87,1305:0,87,255:40,0 chr2 103281559 . G . PASS END=103281582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,110,1352:0,110,255:40,0 chr2 103281583 . T . PASS END=103281764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:36:0,81,1215:0,92,255:40,0 chr2 103281765 . G . PASS END=103281768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:32:0,78,1170:0,91,255:26,0 chr2 103281769 . T . PASS END=103281769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:25,0 chr2 103281770 . A . PASS END=103281792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr2 103281793 . C . PASS END=103281809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,47,255:18,0 chr2 103299720 . A . PASS END=103299725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 103299726 . T . PASS END=103299726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 103299727 . G . PASS END=103299860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:31:0,82,1127:0,82,255:40,0 chr2 103299861 . C . PASS END=103299861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:33,0 chr2 103299862 . G . PASS END=103299879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,89,255:34,0 chr2 103299880 . T . PASS END=103299881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 103299882 . G . PASS END=103299884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,88,255:27,0 chr2 103299885 . C . PASS END=103299888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 103299889 . G . PASS END=103299896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 103299897 . C . PASS END=103299897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 103299898 . T . PASS END=103299898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 103299899 . G . PASS END=103299899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 103299900 . C . PASS END=103299901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 103299902 . T . PASS END=103299906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 103299907 . C . PASS END=103299907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 103299908 . T . PASS END=103299932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,71,255:26,0 chr2 103299933 . C . PASS END=103299937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 103300593 . G . PASS END=103300600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,925:0,72,255:26,0 chr2 103300601 . G . PASS END=103300607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,987:0,81,255:31,0 chr2 103300608 . C . PASS END=103300608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 103300609 . T . PASS END=103300795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:31:0,90,1097:0,93,255:40,0 chr2 103310873 . G . PASS END=103310962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,150,255:40,0 chr2 103311502 . T . PASS END=103311572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:75:0,120,1800:0,210,255:40,0 chr2 103317529 . G . PASS END=103317690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:42:0,99,1485:0,111,255:40,0 chr2 103318865 . T . PASS END=103318961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:43:0,96,1533:0,96,255:40,0 chr2 103321003 . A . PASS END=103321006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1056:0,90,255:30,0 chr2 103321007 . T . PASS END=103321007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr2 103321008 . A . PASS END=103321130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:32:0,90,1180:0,90,255:40,0 chr2 103321131 . C . PASS END=103321134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:36:0,72,1080:0,108,255:24,0 chr2 103322305 . G . PASS END=103322395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:56:0,120,1800:0,138,255:40,0 chr2 103324578 . A . PASS END=103324581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,817:0,61,255:26,0 chr2 103324582 . C . PASS END=103324588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 103324589 . A . PASS END=103324593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 103324594 . C . PASS END=103324594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 103324595 . T . PASS END=103324596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1030:0,68,255:27,0 chr2 103324597 . A . PASS END=103324597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:26,0 chr2 103324598 . G . PASS END=103324599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 103324600 . C . PASS END=103324600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 103324601 . G . PASS END=103324601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 103324602 . C . PASS END=103324602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 103324603 . A . PASS END=103324618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1009:0,84,255:34,0 chr2 103324619 . G . PASS END=103324619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr2 103324620 . T . PASS END=103324641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:34:0,88,1203:0,88,255:37,0 chr2 103324642 . C . PASS END=103324642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:32,0 chr2 103324643 . A . PASS END=103324690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1235:0,81,255:37,0 chr2 103324691 . A . PASS END=103324691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1217:0,61,255:29,0 chr2 103324692 . A . PASS END=103324692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 103324693 . A . PASS END=103324693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1013:0,79,255:30,0 chr2 103324694 . A . PASS END=103324706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1119:0,82,255:33,0 chr2 103324707 . A . PASS END=103324707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1157:0,72,255:31,0 chr2 103324708 . T . PASS END=103324744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,94,255:33,0 chr2 103324745 . A . PASS END=103324746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:70:34:0,70,1174:0,70,255:29,1 chr2 103324747 . C . PASS END=103324747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:27,0 chr2 103324748 . C . PASS END=103324753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr2 103324754 . A . PASS END=103324763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,80,255:26,0 chr2 103324764 . G . PASS END=103324775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1058:0,87,255:30,0 chr2 103324776 . G . PASS END=103324776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,974:0,51,255:28,0 chr2 103324777 . C . PASS END=103324837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:30:0,83,1141:0,83,255:39,0 chr2 103324838 . A . PASS END=103324838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1231:0,54,255:34,0 chr2 103324839 . G . PASS END=103324941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,90,255:40,0 chr2 103324942 . G . PASS END=103324948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:26,0 chr2 103334879 . C . PASS END=103334905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:19,0 chr2 103334906 . A . PASS END=103334916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr2 103334917 . A . PASS END=103334917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr2 103334918 . G . PASS END=103334924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 103334925 . T . PASS END=103334925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,568:0,30,255:19,0 chr2 103334926 . T . PASS END=103334930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,665:0,63,255:22,0 chr2 103334931 . A . PASS END=103334931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,653:0,33,255:20,0 chr2 103334932 . G . PASS END=103334932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,657:0,66,255:22,0 chr2 103334933 . A . PASS END=103334933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,529:0,16,255:19,0 chr2 103334934 . G . PASS END=103334934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr2 103334935 . A . PASS END=103334935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:2:22:0,2,552:0,2,255:19,0 chr2 103334936 . C . PASS END=103334936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr2 103334937 . A . PASS END=103334937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 103334938 . T . PASS END=103334938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:20,0 chr2 103334939 . T . PASS END=103334942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,65,255:21,0 chr2 103334943 . A . PASS END=103334943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr2 103334944 . A . PASS END=103334946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 103334947 . T . PASS END=103334948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,601:0,32,255:20,0 chr2 103334949 . G . PASS END=103334949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 103334950 . C . PASS END=103334953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr2 103334954 . T . PASS END=103334954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,589:0,49,255:20,0 chr2 103334955 . A . PASS END=103334956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 103334957 . G . PASS END=103334957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,615:0,19,255:18,0 chr2 103334958 . G . PASS END=103334960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 103334961 . A . PASS END=103334961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 103334962 . A . PASS END=103334964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 103334965 . C . PASS END=103334965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 103334966 . A . PASS END=103334966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 103334967 . G . PASS END=103334967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:19,0 chr2 103334968 . C . PASS END=103334968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 103334969 . G A, 115.73 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,254,254,254:255,69,0:0,0:1.1573e+02,6.5734e+01,1.0354e-06,2.5050e+02,2.8527e+02,2.5351e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,8,15:0,0,12,11 chr2 103334970 . C . PASS END=103334971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 103334972 . C . PASS END=103334973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,65,255:19,0 chr2 103334974 . G . PASS END=103334974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:21:23:0,21,625:0,21,255:19,0 chr2 103334975 . G . PASS END=103334978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:19,0 chr2 103334979 . G . PASS END=103334979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 103334980 . G . PASS END=103334983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:18,0 chr2 103334984 . G . PASS END=103334984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 103334985 . C . PASS END=103334985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 103334986 . C . PASS END=103334988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 103334989 . A . PASS END=103334991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,731:0,50,255:20,0 chr2 103334992 . G . PASS END=103334994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 103334995 . T . PASS END=103335003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,731:0,49,255:19,0 chr2 103335004 . G . PASS END=103335004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 103335005 . G . PASS END=103335006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 103335007 . C . PASS END=103335008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 103335009 . A . PASS END=103335009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,1 chr2 103335010 . C . PASS END=103335011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:23,1 chr2 103335012 . C . PASS END=103335017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,846:0,72,255:24,0 chr2 103335018 . A . PASS END=103335019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr2 103335020 . G . PASS END=103335020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 103335021 . A . PASS END=103335021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 103335022 . G . PASS END=103335022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 103335023 . A . PASS END=103335023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 103335024 . G . PASS END=103335027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr2 103335028 . C . PASS END=103335028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,808:0,31,255:24,0 chr2 103335029 . G . PASS END=103335035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,908:0,61,255:25,0 chr2 103335036 . C . PASS END=103335036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:22,0 chr2 103335037 . G . PASS END=103335056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:23,0 chr2 103335057 . T . PASS END=103335057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 103335058 . G . PASS END=103335059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 103335060 . C . PASS END=103335060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 103335061 . C . PASS END=103335063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 103335064 . C . PASS END=103335064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:18,0 chr2 103335065 . G . PASS END=103335065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 103335066 . C . PASS END=103335066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 103335067 . C . PASS END=103335067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 103335068 . A . PASS END=103335068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr2 103335069 . A . PASS END=103335069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 103335070 . T . PASS END=103335070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 103335071 . A . PASS END=103335076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 103335077 . G . PASS END=103335077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 103335078 . C . PASS END=103335078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 103335079 . C . PASS END=103335082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 103335083 . G . PASS END=103335084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 103335085 . C . PASS END=103335085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr2 103335086 . C . PASS END=103335086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 103335087 . T . PASS END=103335087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 103335088 . G . PASS END=103335092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 103335093 . C . PASS END=103335093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr2 103335094 . C . PASS END=103335106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:23,0 chr2 103335107 . C . PASS END=103335107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:22,0 chr2 103335108 . T . PASS END=103335110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 103335111 . A . PASS END=103335111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 103335112 . G . PASS END=103335123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,906:0,62,255:24,0 chr2 103335124 . A . PASS END=103335124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 103335125 . C . PASS END=103335148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,917:0,64,255:26,0 chr2 103335149 . G . PASS END=103335151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 103335152 . C . PASS END=103335152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 103335153 . A . PASS END=103335155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 103335156 . A . PASS END=103335156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr2 103335157 . G . PASS END=103335164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1194:0,90,255:31,0 chr2 103335165 . G . PASS END=103335165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 103335166 . A . PASS END=103335169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 103335170 . G . PASS END=103335170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 103335171 . A . PASS END=103335196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:33,0 chr2 103335197 . G . PASS END=103335197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 103335198 . G . PASS END=103335202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 103335203 . G . PASS END=103335214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1092:0,74,255:26,0 chr2 103335215 . T . PASS END=103335215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:25,0 chr2 103335216 . G . PASS END=103335216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 103335217 . T . PASS END=103335217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 103335218 . G . PASS END=103335219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 103335220 . A . PASS END=103335220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:22,0 chr2 103335221 . G . PASS END=103335258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,68,255:25,0 chr2 103335259 . T . PASS END=103335270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,759:0,50,255:19,0 chr2 103335271 . G . PASS END=103335280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 103335281 . T . PASS END=103335281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 103335282 . G . PASS END=103335285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 103335286 . C . PASS END=103335338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:17,0 chr2 103335339 . C . PASS END=103335339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 103335340 . C . PASS END=103335347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,637:0,41,255:18,0 chr2 103335348 . T . PASS END=103335352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 103335353 . C . PASS END=103335353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 103335354 . C . PASS END=103335357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 103335358 . C . PASS END=103335358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr2 103335359 . C . PASS END=103335375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr2 103335376 . G . PASS END=103335376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr2 103335377 . G . PASS END=103335392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,933:0,62,255:26,0 chr2 103335393 . C . PASS END=103335395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:30,0 chr2 103335396 . T . PASS END=103335396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr2 103335397 . A . PASS END=103335445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1056:0,87,255:32,0 chr2 103335446 . C . PASS END=103335446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 103335447 . C . PASS END=103335465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1103:0,87,255:30,0 chr2 103335466 . G . PASS END=103335466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 103335467 . G . PASS END=103335471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 103335472 . T . PASS END=103335472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 103335473 . C . PASS END=103335482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 103335483 . A . PASS END=103335484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 103335485 . G . PASS END=103335487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:29,0 chr2 103335488 . C . PASS END=103335500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr2 103335501 . A . PASS END=103335502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 103335503 . C . PASS END=103335505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,992:0,70,255:26,0 chr2 103335506 . G . PASS END=103335514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 103335515 . A . PASS END=103335524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,889:0,67,255:26,0 chr2 103335525 . C . PASS END=103335537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1070:0,84,255:32,0 chr2 103335538 . T . PASS END=103335541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 103335542 . G . PASS END=103335637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1125:0,80,255:40,0 chr2 103335638 . T . PASS END=103335638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 103335639 . T . PASS END=103335641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 103335642 . C . PASS END=103335651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1062:0,74,255:26,0 chr2 103335652 . A . PASS END=103335652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 103335653 . G . PASS END=103335654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,805:0,64,255:26,0 chr2 103335655 . A . PASS END=103335663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr2 103335664 . G . PASS END=103335664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 103335665 . A . PASS END=103335665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 103335666 . C . PASS END=103335666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 103340159 . C . PASS END=103340178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,99,1535:0,99,255:40,2 chr2 103340179 . A . PASS END=103340179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1592:0,72,255:40,2 chr2 103340180 . A . PASS END=103340352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:91:38:0,91,1335:0,91,255:40,0 chr2 103340353 . G . PASS END=103340353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr2 103340354 . T . PASS END=103340368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:38:0,83,1199:0,83,255:39,0 chr2 103343304 . C . PASS END=103343304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:24,0 chr2 103343305 . T . PASS END=103343305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,656:0,17,255:23,0 chr2 103343306 . G . PASS END=103343306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,881:0,48,255:27,0 chr2 103343307 . C . PASS END=103343307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 103343308 . C . PASS END=103343308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,928:0,51,255:27,0 chr2 103343309 . G . PASS END=103343311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 103343312 . A . PASS END=103343313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1133:0,72,255:33,0 chr2 103343314 . T . PASS END=103343321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1150:0,88,255:34,0 chr2 103343322 . G . PASS END=103343328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1168:0,91,255:36,0 chr2 103343329 . C . PASS END=103343329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:35,0 chr2 103343330 . A . PASS END=103343330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1358:0,111,255:37,0 chr2 103343331 . G . PASS END=103343331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1278:0,67,255:36,0 chr2 103343332 . A . PASS END=103343345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:90:40:0,90,1387:0,90,255:40,0 chr2 103343346 . C . PASS END=103343346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:58:46:0,58,1524:0,58,255:40,0 chr2 103343347 . T . PASS END=103343433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:36:0,89,1310:0,89,255:40,0 chr2 103347484 . C . PASS END=103347527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:90:0,120,1800:0,255,255:40,0 chr2 103348483 . C . PASS END=103348521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:71:0,120,1800:0,181,255:40,0 chr2 103348537 . C . PASS END=103348597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:66:0,120,1800:0,149,255:40,0 chr2 103348781 . C . PASS END=103348868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,108,1620:0,120,255:40,0 chr2 103353069 . T . PASS END=103353079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1113:0,83,255:33,0 chr2 103353080 . T . PASS END=103353080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr2 103353081 . C . PASS END=103353183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1150:0,83,255:37,0 chr2 103353184 . C . PASS END=103353185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:74:35:0,74,1219:0,74,255:33,0 chr2 103353186 . T . PASS END=103353196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:36:0,81,1199:0,81,255:37,0 chr2 103353197 . C . PASS END=103353197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:30,0 chr2 103353198 . C . PASS END=103353241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1149:0,81,255:35,0 chr2 103353242 . T . PASS END=103353242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1107:0,60,255:28,0 chr2 103353243 . C . PASS END=103353246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 103353247 . T . PASS END=103353247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:28,0 chr2 103353248 . C . PASS END=103353251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 103353252 . G . PASS END=103353252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 103353253 . T . PASS END=103353254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 103353255 . A . PASS END=103353255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 103353256 . C . PASS END=103353258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 103353259 . C . PASS END=103353261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 103353262 . A . PASS END=103353266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:28:0,57,855:0,71,255:19,0 chr2 103353267 . C . PASS END=103353269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,70,255:20,0 chr2 103374930 . A . PASS END=103374932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,188,255:40,0 chr2 103378677 . A . PASS END=103378682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,987:0,71,255:26,0 chr2 103378683 . C . PASS END=103378695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,970:0,81,255:35,0 chr2 103378696 . T . PASS END=103378696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:34,0 chr2 103378697 . C . PASS END=103378808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:93:41:0,93,1368:0,93,255:40,0 chr2 103379046 . A . PASS END=103379145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,116,1574:0,116,255:40,0 chr2 103380788 . C . PASS END=103380886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1305:0,92,255:40,0 chr2 103391589 . G . PASS END=103391599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,132,255:40,0 chr2 103414322 . T . PASS END=103414322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,967:0,79,255:29,0 chr2 103414323 . T . PASS END=103414459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:32:0,84,1260:0,95,255:40,0 chr2 103423181 . G . PASS END=103423236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,181,255:40,0 chr2 103431207 . G . PASS END=103431229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1166:0,88,255:36,0 chr2 103431230 . A . PASS END=103431230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1189:0,64,255:33,0 chr2 103431231 . T . PASS END=103431366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:37:0,105,1575:0,111,255:40,2 chr2 103431367 . T . PASS END=103431403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:57:0,120,1800:0,169,255:40,0 chr2 103431404 . T C, 218.55 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,30,0:0,27,0:169:256,172,0,2186,172,2186:255,172,0:0,0:2.1855e+02,1.6855e+02,0.0000e+00,4.5000e+02,2.0332e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,38:0,0,24,33 chr2 103431405 . G . PASS END=103431421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:39:0,82,1350:0,82,255:40,0 chr2 103431422 . C . PASS END=103431422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:28,0 chr2 103431423 . A . PASS END=103431423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 103431424 . C . PASS END=103431426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:29,0 chr2 103431427 . A . PASS END=103431427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr2 103459871 . A . PASS END=103459871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:24,0 chr2 103459872 . T . PASS END=103459874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 103459875 . A . PASS END=103460019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:28:0,81,1002:0,84,255:40,0 chr2 103460020 . G . PASS END=103460034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,945:0,78,255:25,0 chr2 103549343 . G . PASS END=103549391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,171,255:40,0 chr2 103549392 . C . PASS END=103549428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,186,255:40,0 chr2 103549429 . A T, 259.76 PASS DP=72;MQ=249.19;FractionInformativeReads=0.986 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,71,0:1.000,0.000:71:0,43,0:0,28,0:210:298,213,0,2679,213,2686:255,197,0:1,0:2.5976e+02,2.0976e+02,0.0000e+00,4.5000e+02,2.4454e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,39:0,0,34,37 chr2 103549430 . G . PASS END=103549464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,140,255:40,0 chr2 103582112 . C . PASS END=103582130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,116,1800:0,116,255:40,0 chr2 103582131 . C . PASS END=103582149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:62:0,120,1800:0,178,255:40,0 chr2 105471969 . A . LowGQ END=105472121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr2 105472122 . C . PASS END=105472129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:9,0 chr2 105472130 . C . PASS END=105472136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr2 105472137 . G . PASS END=105472154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:18,0 chr2 105472155 . T . PASS END=105472155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 105472156 . A . PASS END=105472163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 105472164 . G . PASS END=105472164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 105472165 . A . PASS END=105472198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr2 105472199 . C . PASS END=105472199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 105472200 . A . PASS END=105472205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 105472206 . G . PASS END=105472215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 105472216 . C . PASS END=105472216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:15,0 chr2 105472217 . C . PASS END=105472217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 105472218 . G . LowGQ END=105472218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,459:21,0,255:13,0 chr2 105472219 . C . PASS END=105472220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 105472221 . A . PASS END=105472222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,482:0,7,255:15,0 chr2 105472223 . C . PASS END=105472223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 105472224 . A . PASS END=105472224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,512:0,21,255:15,0 chr2 105472225 . A . PASS END=105472225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 105472226 . C . LowGQ END=105472227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,5:18:0:17:0,0,355:0,0,255:12,0 chr2 105472228 . G . PASS END=105472228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,523:0,37,255:13,0 chr2 105472229 . C . PASS END=105472229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,523:0,15,255:13,0 chr2 105472230 . G . LowGQ END=105472230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,455:12,0,255:12,0 chr2 105472231 . G . PASS END=105472231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 105472232 . C . PASS END=105472232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:14,0 chr2 105472233 . C . PASS END=105472233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 105472234 . A . LowGQ END=105472235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,457:9,0,255:12,0 chr2 105472236 . A . PASS END=105472237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,593:0,21,255:14,0 chr2 105472238 . G . LowGQ END=105472238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,510:6,0,255:13,0 chr2 105472239 . C . PASS END=105472239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,606:0,13,255:13,0 chr2 105472240 . T . LowGQ END=105472240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,482:29,0,255:15,0 chr2 105472241 . G . PASS END=105472241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr2 105472242 . A . PASS END=105472243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:14,0 chr2 105472244 . C . LowGQ END=105472244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,451:4,0,255:14,0 chr2 105472245 . C . PASS END=105472247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 105472248 . G . LowGQ END=105472248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,455:21,0,255:14,0 chr2 105472249 . C . PASS END=105472249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 105472250 . G . PASS END=105472250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:14,0 chr2 105472251 . C . PASS END=105472251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 105472252 . A . PASS END=105472252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,502:0,4,255:14,0 chr2 105472253 . C . PASS END=105472254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 105472255 . A . PASS END=105472255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:15,0 chr2 105472256 . G . PASS END=105472256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,512:0,7,255:15,0 chr2 105472257 . T . PASS END=105472258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 105472259 . G . PASS END=105472260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:17:0,37,585:0,37,255:13,0 chr2 105472261 . T . PASS END=105472261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,504:0,7,255:11,0 chr2 105472262 . C . PASS END=105472265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:23:18:0,23,405:0,23,255:11,0 chr2 105472266 . G . PASS END=105472266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,529:0,7,255:8,0 chr2 105472267 . C . PASS END=105472269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:24:16:0,24,360:0,48,255:9,0 chr2 105472270 . T . LowGQ END=105472270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,435:29,0,255:8,0 chr2 105472271 . G . PASS END=105472275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:11:0,23,360:0,23,255:8,0 chr2 105472276 . A . PASS END=105472276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr2 105472277 . C . PASS END=105472277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 105472278 . G . PASS END=105472278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr2 105472279 . C . PASS END=105472280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 105472281 . G . PASS END=105472282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 105472283 . C . PASS END=105472286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 105472287 . G . PASS END=105472287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr2 105472288 . C . PASS END=105472289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 105472290 . G . LowGQ END=105472290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:6,0 chr2 105472291 . C . PASS END=105472292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 105472293 . G . PASS END=105472293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 105472294 . C . PASS END=105472294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 105472295 . C . PASS END=105472296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:8:0,10,270:0,10,255:7,0 chr2 105472297 . C . PASS END=105472297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 105472298 . TGCC T, 0.01 DRAGENIndelHardQUAL DP=9;MQ=230.16;MQRankSum=-0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:7,0,0:1,1,0:29:0,8,58,23,217,232:12,0,255:7,2:5.8244e-03,2.8734e+01,8.1734e+01,5.7651e+01,2.7243e+02,2.6958e+02:0.00,21.00,24.00,34.77,55.77,37.77:1,7,0,1:2,6,1,0 chr2 105472299 . G . LowGQ END=105472302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:9:0,0,188:28,0,222:8,2 chr2 105472303 . C . PASS END=105472309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 105472310 . C . LowGQ END=105472310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:28,0,244:4,0 chr2 105472311 . G . PASS END=105472312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,225:0,11,255:5,0 chr2 105472313 . C . LowGQ END=105472313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:5,0 chr2 105472314 . G . PASS END=105472314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 105472315 . T . LowGQ END=105472316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:12,0,253:5,0 chr2 105472317 . G . PASS END=105472317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:9:0,12,180:0,27,255:4,0 chr2 105472318 . A . LowGQ END=105472319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:4,0 chr2 105472320 . G . PASS END=105472321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,233:4,0 chr2 105472322 . G . LowGQ END=105472324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,103:0,0,123:4,0 chr2 105472325 . C . PASS END=105472325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr2 105472326 . T . LowGQ END=105472326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:4,0 chr2 105472327 . C . PASS END=105472334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 105472335 . T . PASS END=105472341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,133:3,0 chr2 105472342 . G . LowDepth;LowGQ END=105472627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 105472628 . G . PASS END=105472628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 105472629 . C . LowGQ END=105472629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr2 105472630 . T . PASS END=105472630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 105472631 . C . LowGQ END=105472631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 105472632 . T . PASS END=105472639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:5,0 chr2 105472640 . G . LowGQ END=105472640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr2 105472641 . C . PASS END=105472641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 105472642 . C . LowGQ END=105472643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr2 105472644 . G . PASS END=105472652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,133:0,15,133:5,0 chr2 105472653 . A . LowGQ END=105472653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 105472654 . C . PASS END=105472659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 105472660 . A . PASS END=105472660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,149:0,4,149:6,0 chr2 105472661 . C . PASS END=105472666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 105472667 . G . PASS END=105472667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 105472668 . C . PASS END=105472674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,303:0,27,255:9,0 chr2 105472675 . C . PASS END=105472713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,333:0,30,255:13,0 chr2 105472714 . G . PASS END=105472714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 105472715 . T . PASS END=105472715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr2 105472716 . G . PASS END=105472718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 105472719 . G . PASS END=105472739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:25,0 chr2 105472740 . G . PASS END=105472742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 105472743 . C . PASS END=105472743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 105472744 . T . PASS END=105472745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 105472746 . G . PASS END=105472746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 105472747 . T . PASS END=105472770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:31:0,86,1225:0,86,255:37,0 chr2 105472771 . C . PASS END=105472771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:33,0 chr2 105472772 . C . PASS END=105472775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:38:0,86,1390:0,86,255:34,2 chr2 105472776 . C . PASS END=105472777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1351:0,51,255:31,2 chr2 105472778 . C . PASS END=105472778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:37:41:0,37,1379:0,37,255:32,2 chr2 105472779 . C . PASS END=105472800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:37:0,82,1443:0,82,255:36,0 chr2 105472801 . C . PASS END=105472801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr2 105472802 . G . PASS END=105472831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:33:0,93,1268:0,94,255:36,0 chr2 105472832 . G . PASS END=105472832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr2 105472833 . C . PASS END=105472841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:32,0 chr2 105472842 . C . PASS END=105472869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr2 105472870 . C . PASS END=105472870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 105472871 . G . PASS END=105472898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr2 105472899 . C . PASS END=105472951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:19,0 chr2 105472952 . G . PASS END=105472952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105472953 . T . PASS END=105472953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:18,0 chr2 105472954 . T . PASS END=105472983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:24,0 chr2 105472984 . C . PASS END=105472984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 105472985 . G . PASS END=105473028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,798:0,63,255:26,0 chr2 105473029 . T . PASS END=105473031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 105473032 . T . PASS END=105473032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:27,0 chr2 105473033 . C . PASS END=105473036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 105473037 . C . PASS END=105473041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 105473042 . C . PASS END=105473042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:25,0 chr2 105473043 . A . PASS END=105473092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,930:0,62,255:26,0 chr2 105473093 . G . PASS END=105473099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,979:0,84,255:28,0 chr2 105473100 . C . PASS END=105473149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:26,0 chr2 105473150 . C . PASS END=105473179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:19,0 chr2 105473180 . C . PASS END=105473182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 105473183 . C . PASS END=105473213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,47,255:19,0 chr2 105473214 . A . PASS END=105473215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 105473216 . C . PASS END=105473220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 105473221 . A . PASS END=105473235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:13:0,34,540:0,34,255:13,0 chr2 105473236 . G . PASS END=105473236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 105473237 . C . PASS END=105473240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 105473241 . T . PASS END=105473259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 105473260 . C . PASS END=105473260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 105473261 . C . PASS END=105473262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105473263 . C . PASS END=105473263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 105473264 . C . PASS END=105473265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 105473266 . C . PASS END=105473266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 105473267 . G . PASS END=105473315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:16:0,43,568:0,43,255:19,0 chr2 105473316 . G . PASS END=105473318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 105473319 . C . PASS END=105473329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 105473330 . C . PASS END=105473338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,752:0,63,255:21,1 chr2 105473339 . G . PASS END=105473339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 105473340 . C . PASS END=105473343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 105473344 . A . PASS END=105473350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:22:0,52,784:0,52,255:19,0 chr2 105473351 . G . PASS END=105473351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 105473352 . A . PASS END=105473354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 105473355 . C . PASS END=105473367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 105473368 . C . PASS END=105473411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,627:0,40,255:19,0 chr2 105473412 . G . PASS END=105473412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:13,0 chr2 105473413 . G . PASS END=105473413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 105473414 . C . PASS END=105473418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr2 105473419 . T . PASS END=105473420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 105473421 . A . PASS END=105473424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 105473425 . C . PASS END=105473429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105473430 . A . PASS END=105473453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 105473454 . C . PASS END=105473454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 105473455 . A . PASS END=105473469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 105473470 . G . PASS END=105473471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 105654551 . A . PASS END=105654551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:25,0 chr2 105654552 . T . PASS END=105654552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:22:26:0,22,756:0,22,255:24,0 chr2 105654553 . G . PASS END=105654561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,832:0,61,255:26,0 chr2 105654562 . C . PASS END=105654562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 105654563 . T . PASS END=105654563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:27,0 chr2 105654564 . G . PASS END=105654564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 105654565 . T . PASS END=105654565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 105654566 . G . PASS END=105654579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1074:0,82,255:31,0 chr2 105654580 . A . PASS END=105654581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 105654582 . C . PASS END=105654595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1097:0,82,255:33,0 chr2 105654596 . C . PASS END=105654596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:33,0 chr2 105654597 . T . PASS END=105654610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1156:0,88,255:36,0 chr2 105654611 . A . PASS END=105654611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:31,0 chr2 105654612 . G . PASS END=105654636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,84,255:36,0 chr2 105654637 . C . PASS END=105654637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,82,255:25,0 chr2 105654638 . C . PASS END=105654641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 105654642 . G . PASS END=105654642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 105654643 . G . PASS END=105654643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 105654644 . A . PASS END=105654645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 105654646 . A . PASS END=105654646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr2 105654647 . A . PASS END=105654647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 105654648 . C . PASS END=105654648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 105654649 . C . PASS END=105654651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 105654652 . G . PASS END=105654685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,931:0,64,255:26,0 chr2 105665629 . A . PASS END=105665801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:46:0,120,1800:0,124,255:40,0 chr2 105665802 . T . PASS END=105665802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:79:59:0,79,1710:0,79,255:40,0 chr2 105665803 . A . PASS END=105665808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,119,1800:0,119,255:40,0 chr2 105687771 . A . PASS END=105687833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:64:0,120,1800:0,182,255:40,0 chr2 105687917 . C . PASS END=105687947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:124,1:125:99:122:0,120,1800:0,255,255:40,0 chr2 105696441 . C . PASS END=105696520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:63:0,120,1800:0,183,255:40,0 chr2 105705442 . G . PASS END=105705527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,141,255:40,0 chr2 105706378 . A . PASS END=105706453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:98:0,120,1800:0,250,255:40,0 chr2 105707780 . G . PASS END=105707824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 105708859 . T . PASS END=105708985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,100,1366:0,100,255:40,0 chr2 105708986 . T . PASS END=105709021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:31:0,87,1305:0,93,255:40,0 chr2 105709022 . G . PASS END=105709022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 105709023 . T C, 139.84 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:90:178,93,0,1165,93,1165:255,93,0:0,0:1.3984e+02,8.9838e+01,0.0000e+00,4.5000e+02,1.2461e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,16:0,0,13,18 chr2 105709024 . G . PASS END=105709027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:29,0 chr2 105709988 . G . PASS END=105710096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:61:0,120,1800:0,170,255:40,0 chr2 105713613 . A . PASS END=105713613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:22,0 chr2 105713614 . G . PASS END=105713646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr2 105713647 . C . PASS END=105713647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr2 105713648 . G . PASS END=105713651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 105713652 . G . PASS END=105713652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 105713653 . G . PASS END=105713655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 105713656 . A . PASS END=105713656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 105713657 . A . PASS END=105713657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 105713658 . G . PASS END=105713658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 105713659 . C . PASS END=105713660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 105713661 . C . PASS END=105713661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 105713662 . G . PASS END=105713730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:32:0,86,1191:0,86,255:39,0 chr2 105713731 . A . PASS END=105713731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:33,0 chr2 105713732 . A . PASS END=105713755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:32,0 chr2 105713756 . A . PASS END=105713756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr2 105713757 . G . PASS END=105713765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:29,0 chr2 105713766 . C . PASS END=105713767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 105713768 . A . PASS END=105713772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 105713773 . A . PASS END=105713773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 105713774 . T . PASS END=105713777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 105713778 . A . PASS END=105713778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 105713779 . C . PASS END=105713780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 105713781 . A . PASS END=105713782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 105716128 . C . PASS END=105716219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,110,1496:0,110,255:40,0 chr2 105858316 . A . PASS END=105858319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 105858320 . C . PASS END=105858320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 105858321 . C . PASS END=105858329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:31,0 chr2 105858330 . C . PASS END=105858331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 105858332 . C . PASS END=105858484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:32:0,82,1133:0,82,255:40,1 chr2 105858485 . T . PASS END=105858486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:36:0,78,1170:0,108,255:26,0 chr2 105858487 . A . PASS END=105858523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1188:0,96,255:35,0 chr2 105858524 . A . PASS END=105858524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1262:0,78,255:33,0 chr2 105858525 . C . PASS END=105858561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,108,1620:0,117,255:40,0 chr2 105858562 . C . PASS END=105858562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:28:39:0,28,1119:0,28,255:33,0 chr2 105858563 . T . PASS END=105858588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:36,0 chr2 105858589 . G . PASS END=105858589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:28,0 chr2 105858590 . C . PASS END=105858591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 105858592 . G . PASS END=105858592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 105858593 . T . PASS END=105858633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:32,0 chr2 105858634 . T . PASS END=105858634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 105858635 . G . PASS END=105858640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 105858641 . T . PASS END=105858664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,64,255:26,0 chr2 105858665 . T . PASS END=105858675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 105858676 . G . PASS END=105858676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105858677 . G . PASS END=105858679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 105858680 . T . PASS END=105858683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 105858684 . C . PASS END=105858684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 105858685 . A . PASS END=105858690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 105858691 . C . PASS END=105858691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 105858692 . T . PASS END=105858696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 105858697 . A . PASS END=105858716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:20,0 chr2 105858717 . C . PASS END=105858717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr2 105858718 . A . PASS END=105858776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr2 105858777 . C . PASS END=105858795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,725:0,63,255:21,0 chr2 105858796 . T . PASS END=105858796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 105858797 . G . PASS END=105858804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 105858805 . G . PASS END=105858807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 105858808 . C . PASS END=105858810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 105858811 . T . PASS END=105858813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 105858814 . C . PASS END=105858814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 105858815 . T . PASS END=105858829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:21,0 chr2 105858830 . T . PASS END=105858842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 105858843 . G . PASS END=105858843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr2 105858844 . G . PASS END=105858853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,760:0,63,255:21,0 chr2 105858854 . C . PASS END=105858887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,635:0,40,255:19,0 chr2 105858888 . T . PASS END=105858888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 105858889 . G . PASS END=105858907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:18,0 chr2 105858908 . C . PASS END=105858908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105858909 . C . PASS END=105859016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,559:0,41,255:19,0 chr2 105859017 . C . PASS END=105859017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:15,0 chr2 105859018 . A . PASS END=105859027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:19,0 chr2 105859028 . T . PASS END=105859031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105859032 . G . PASS END=105859034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 105859035 . G . PASS END=105859041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 105859042 . A . PASS END=105859042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 105859043 . G . PASS END=105859050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 105859051 . C . PASS END=105859052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,814:0,53,255:20,0 chr2 105859053 . G . PASS END=105859081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:26,0 chr2 105859082 . G . PASS END=105859293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1055:0,82,255:36,0 chr2 105859294 . A . PASS END=105859294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:27,0 chr2 105859295 . G . PASS END=105859312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:30,0 chr2 105859313 . A . PASS END=105859313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 105859314 . G . PASS END=105859323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:33,0 chr2 105859324 . G . PASS END=105859324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:30,0 chr2 105859325 . A . PASS END=105859394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1194:0,86,255:36,0 chr2 105859395 . C . PASS END=105859412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:23:0,66,839:0,69,255:26,0 chr2 105859413 . T . PASS END=105859413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 105859414 . G . PASS END=105859417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 105859418 . A . PASS END=105859418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr2 105859419 . C . PASS END=105859423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 105859424 . C . PASS END=105859434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr2 105866801 . C . PASS END=105866869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:33:0,81,1215:0,99,255:40,0 chr2 105883840 . T . PASS END=105883840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:26,0 chr2 105883841 . C . PASS END=105883843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr2 105883844 . G . PASS END=105883844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 105883845 . T . PASS END=105883845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 105883846 . C . PASS END=105883846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 105883847 . C . PASS END=105883848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 105883849 . A . PASS END=105883849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 105883850 . G . PASS END=105883855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1019:0,84,255:31,0 chr2 105883856 . G . PASS END=105883856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 105883857 . G . PASS END=105883864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 105883865 . G . PASS END=105883865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 105883866 . A . PASS END=105884016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1119:0,80,255:40,0 chr2 105885729 . C . PASS END=105885731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr2 105885732 . A . PASS END=105885746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr2 105885747 . T . PASS END=105885747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr2 105885748 . A . PASS END=105885748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:22,0 chr2 105885749 . A . PASS END=105885749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr2 105885750 . G . PASS END=105885752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 105885753 . T . PASS END=105885756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 105885757 . G . PASS END=105885759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 105885760 . C . PASS END=105885760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 105885761 . T . PASS END=105885786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:25,0 chr2 105885787 . G . PASS END=105885787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 105885788 . T . PASS END=105885790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 105885791 . T . PASS END=105885791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 105885792 . C . PASS END=105885811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 105885812 . T . PASS END=105885812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 105885813 . C . PASS END=105885813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 105885814 . A . PASS END=105885814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 105885815 . T . PASS END=105885822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 105885823 . A . PASS END=105885824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 105885825 . C . PASS END=105885828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 105885829 . A . PASS END=105885829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,734:0,22,255:19,0 chr2 105885830 . A . PASS END=105885837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 105885838 . A . PASS END=105885839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 105885840 . G . PASS END=105885841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 105885842 . G . PASS END=105885881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:19,0 chr2 105885882 . G . PASS END=105885882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 105885883 . G . PASS END=105885885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:16,0 chr2 105885886 . G . PASS END=105885886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 105885887 . C . PASS END=105885893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr2 105885894 . T . PASS END=105885894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 105885895 . T . PASS END=105885900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 105885901 . G . PASS END=105885901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 105885902 . C . PASS END=105885907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 105885908 . G . PASS END=105885908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 105885909 . G . PASS END=105885916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 105885917 . G . PASS END=105885917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 105885918 . G . PASS END=105885944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,621:0,48,255:19,0 chr2 105885945 . G . PASS END=105885945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 105885946 . G . PASS END=105885964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr2 105885965 . G . PASS END=105885974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:23,0 chr2 105885975 . C . PASS END=105885975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 105885976 . A . PASS END=105886011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,845:0,63,255:23,0 chr2 105886012 . T . PASS END=105886012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr2 105886013 . C . PASS END=105886038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:24,0 chr2 105886039 . T . PASS END=105886043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 105886044 . C . PASS END=105886049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105886050 . C . PASS END=105886051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 105886052 . C . PASS END=105886056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105886057 . A . PASS END=105886067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 105886068 . C . PASS END=105886068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 105886069 . T . PASS END=105886117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 105886118 . G . PASS END=105886119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 105886120 . A . PASS END=105886149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,558:0,45,255:15,0 chr2 105886150 . C . PASS END=105886154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 105886155 . C . PASS END=105886155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105886156 . A . PASS END=105886156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 105886157 . G . PASS END=105886158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105886159 . C . PASS END=105886159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105886160 . T . PASS END=105886160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 105886161 . C . PASS END=105886162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105889312 . C . PASS END=105889318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr2 105889319 . A . PASS END=105889319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr2 105889320 . A . PASS END=105889328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 105889329 . C . PASS END=105889329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 105889330 . G . PASS END=105889330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 105889331 . G . PASS END=105889337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 105889338 . T . PASS END=105889340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 105889341 . G . PASS END=105889342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105889343 . T . PASS END=105889343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 105889344 . T . PASS END=105889347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105889348 . G . PASS END=105889356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 105889357 . G . PASS END=105889384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,576:0,45,255:19,0 chr2 105889385 . C . PASS END=105889393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr2 105889394 . C . PASS END=105889394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 105889395 . T . PASS END=105889407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 105889408 . A . PASS END=105889408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr2 105889409 . G . PASS END=105889442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:19,0 chr2 105889443 . A . PASS END=105889443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 105889444 . C . PASS END=105889452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105889453 . G . PASS END=105889471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,435:0,39,255:13,0 chr2 105890001 . C . PASS END=105890007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:42:0,95,1490:0,95,255:40,0 chr2 105890008 . C . PASS END=105890147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,120,1800:0,127,255:40,0 chr2 105892017 . C . PASS END=105892021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:24,0 chr2 105892022 . C . PASS END=105892022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 105892023 . A . PASS END=105892028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,914:0,72,255:26,0 chr2 105892029 . C . PASS END=105892033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 105892034 . G . PASS END=105892034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 105892035 . G . PASS END=105892160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1215:0,87,255:40,0 chr2 105894071 . C . PASS END=105894128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:73:0,120,1800:0,194,255:40,0 chr2 105896839 . T . PASS END=105896857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:16,0 chr2 105896858 . A . PASS END=105896867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,931:0,72,255:25,0 chr2 105896868 . G . PASS END=105896868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 105896869 . T . PASS END=105896877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 105896878 . A . PASS END=105896885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr2 105896886 . G . PASS END=105896903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr2 105896904 . G . PASS END=105896904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 105896905 . T . PASS END=105896905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 105896906 . C . PASS END=105896907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 105896908 . A . PASS END=105896910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:27,0 chr2 105896911 . A . PASS END=105897036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1038:0,87,255:37,0 chr2 105897037 . G . PASS END=105897037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:33,0 chr2 105897038 . C . PASS END=105897048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1242:0,94,255:36,0 chr2 105897049 . T . PASS END=105897049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:33,0 chr2 105897050 . G . PASS END=105897180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:37:0,88,1388:0,88,255:40,0 chr2 105900773 . C . PASS END=105900855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,168,255:40,0 chr2 105912813 . C . PASS END=105912967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:39:0,84,1363:0,84,255:40,0 chr2 105914968 . C . PASS END=105914968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 105914969 . T . PASS END=105914969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105914970 . T . PASS END=105914970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:19,0 chr2 105914971 . C . PASS END=105914972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105914973 . A . PASS END=105914976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,670:0,46,255:20,0 chr2 105914977 . C . PASS END=105914977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 105914978 . C . PASS END=105914978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 105914979 . T . PASS END=105914980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 105914981 . T . PASS END=105914981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:19,0 chr2 105914982 . A . PASS END=105914983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:22:0,54,810:0,59,255:20,0 chr2 105914984 . G . PASS END=105914984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 105914985 . A . PASS END=105914985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:22,0 chr2 105914986 . T . PASS END=105914994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,894:0,75,255:25,0 chr2 105914995 . C . PASS END=105914996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 105914997 . T . PASS END=105914997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr2 105914998 . T . PASS END=105914998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 105914999 . A . PASS END=105914999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 105915000 . A . PASS END=105915003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,956:0,84,255:28,0 chr2 105915004 . G . PASS END=105915004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 105915005 . C . PASS END=105915006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 105915007 . G . PASS END=105915007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 105915008 . C . PASS END=105915008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:27,0 chr2 105915009 . G . PASS END=105915016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1040:0,87,255:29,0 chr2 105915017 . C . PASS END=105915017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 105915018 . T . PASS END=105915088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1133:0,86,255:35,0 chr2 105915089 . A . PASS END=105915089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 105915090 . G . PASS END=105915101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 105915102 . A . PASS END=105915102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 105915103 . C . PASS END=105915105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:28,0 chr2 105915106 . T . PASS END=105915106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,802:0,53,255:26,0 chr2 105915107 . C . PASS END=105915107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 105915108 . T . PASS END=105915131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,68,255:26,0 chr2 105915132 . T . PASS END=105915132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:19,0 chr2 105915133 . G . PASS END=105915143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 105915144 . G . PASS END=105915144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 105915145 . C . PASS END=105915145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 105915146 . G . PASS END=105915162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,645:0,41,255:19,0 chr2 105924071 . C . PASS END=105924333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1250:0,81,255:40,0 chr2 105924334 . G . PASS END=105924334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:35,0 chr2 105924335 . A . PASS END=105924386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:36,0 chr2 105924387 . C . PASS END=105924428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,70,255:26,0 chr2 105924429 . C . PASS END=105924430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:27,0 chr2 105924431 . C . PASS END=105924458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 105924459 . G . PASS END=105924469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 105924470 . T . PASS END=105924471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 105924472 . T . PASS END=105924472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 105924473 . C . PASS END=105924475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 105924476 . A . PASS END=105924487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,720:0,44,255:19,0 chr2 105924488 . G . PASS END=105924502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr2 105924503 . A . PASS END=105924504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 105924505 . G . PASS END=105924505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 105924506 . C . PASS END=105924506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 105924507 . C . PASS END=105924509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 105924510 . A G, 121.32 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:71:159,74,0,905,74,905:255,75,0:0,0:1.2132e+02,7.1316e+01,2.5886e-07,4.5000e+02,1.0609e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,15:0,0,13,12 chr2 105924511 . C . PASS END=105924522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 105924523 . A . PASS END=105924529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,790:0,50,255:19,0 chr2 105924530 . T . PASS END=105924534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 105924535 . A . PASS END=105924543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 105924544 . T . PASS END=105924545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 105924546 . T . PASS END=105924546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:19,0 chr2 105924547 . C . PASS END=105924547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 105924548 . T . PASS END=105924557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 105924558 . T . PASS END=105924558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 105924559 . T . PASS END=105924591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 105924592 . A . PASS END=105924596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 105924597 . C . PASS END=105924612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 105924613 . A . PASS END=105924639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr2 105924640 . C . PASS END=105924640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 105924641 . C . PASS END=105924642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 105924643 . A . PASS END=105924664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,419:0,36,255:13,0 chr2 105924665 . A . PASS END=105924679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 105924680 . T . PASS END=105924680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr2 105924681 . G . PASS END=105924693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,651:0,51,255:19,0 chr2 105924694 . T . PASS END=105924695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 105924696 . G . PASS END=105924727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,44,255:19,0 chr2 105924728 . A . PASS END=105924728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 105924729 . G . PASS END=105924746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 105924747 . G . PASS END=105924758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 105953931 . A . LowGQ END=105953937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:16,0:16:0:16:0,0,0:0,48,255:0,0 chr2 105953938 . G GC, 95.14 PASS DP=17;MQ=250.00;FractionInformativeReads=0.941 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,7,0:0,9,0:45:127,48,0,560,48,560:255,48,0:0,23:9.5143e+01,4.5143e+01,1.3280e-04,4.5000e+02,7.9913e+01,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,9,7:0,0,8,8 chr2 105953939 . A . LowGQ END=105953939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,16:16:0:16:0,0,0:255,48,0:14,0 chr2 105953940 . C . PASS END=105953944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,558:0,45,255:15,0 chr2 105953945 . A . PASS END=105953945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 105953946 . G . PASS END=105953970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr2 105953971 . C . PASS END=105953981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:22,0 chr2 105953982 . C . PASS END=105953989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr2 105953990 . A . PASS END=105953990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 105953991 . C . PASS END=105954006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,922:0,72,255:24,0 chr2 105954007 . C . PASS END=105954007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 105954008 . T . PASS END=105954015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 105954016 . T . PASS END=105954016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 105954017 . A . PASS END=105954021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 105954022 . A . PASS END=105954059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:18,0 chr2 105954060 . G . PASS END=105954077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 105954078 . G . PASS END=105954083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 105954084 . G . PASS END=105954084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 105954085 . A . PASS END=105954089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 105954090 . C . PASS END=105954090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:15,0 chr2 105954091 . T . PASS END=105954091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 105954092 . G . PASS END=105954092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 105954093 . C . PASS END=105954093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr2 105954094 . T . PASS END=105954094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:14,0 chr2 105954095 . G . PASS END=105954095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 105954096 . C . PASS END=105954096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr2 105954097 . A . PASS END=105954097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 105954098 . C . PASS END=105954098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 105954099 . C . PASS END=105954104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr2 105954105 . C . PASS END=105954105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:12,0 chr2 105954106 . T . PASS END=105954107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 105954108 . C . PASS END=105954108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr2 105954109 . T . PASS END=105954109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 105954110 . G . PASS END=105954110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:9,0 chr2 105954111 . T . LowGQ END=105954112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:9,0 chr2 105954113 . C . PASS END=105954115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 105954116 . G . PASS END=105954117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 105954118 . A . PASS END=105954118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,390:0,8,255:10,0 chr2 105954119 . G . PASS END=105954119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr2 105954120 . T . PASS END=105954123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,363:0,6,255:9,0 chr2 105954124 . T . PASS END=105954124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr2 105954125 . T . LowGQ END=105954128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,349:0,0,255:10,0 chr2 105954129 . C . LowGQ END=105954132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,233:0,0,255:9,0 chr2 105954133 . C . PASS END=105954133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:9,0 chr2 105954134 . T . LowGQ END=105954136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,186:0,0,249:8,0 chr2 105954137 . G . PASS END=105954138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 105954139 . A . LowGQ END=105954139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,246:31,0,255:6,0 chr2 105954140 . G . PASS END=105954140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 105954141 . C . LowGQ END=105954142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,172:45,0,255:5,0 chr2 105954143 . G . PASS END=105954143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 105956040 . A . PASS END=105956206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:98:47:0,98,1665:0,98,255:40,0 chr2 105959305 . G . PASS END=105959676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:34:0,81,1215:0,86,255:40,0 chr2 105959677 . C . PASS END=105959680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,82,255:25,0 chr2 105961772 . A . PASS END=105961828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:75:0,120,1800:0,159,255:40,0 chr2 105977740 . T . PASS END=105977745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:16,0 chr2 105977746 . G . PASS END=105977746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 105977747 . T . PASS END=105977747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,540:0,51,255:17,0 chr2 105977748 . C . PASS END=105977748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 105977749 . T . PASS END=105977752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr2 105977753 . C . PASS END=105977753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 105977754 . C . PASS END=105977758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr2 105977759 . T . PASS END=105977759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 105977760 . C . PASS END=105977765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr2 105977766 . A . PASS END=105977766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 105977767 . C . PASS END=105977770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 105977771 . A . PASS END=105977785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,825:0,66,255:25,0 chr2 105977786 . G . PASS END=105977789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:29,0 chr2 105977790 . G . PASS END=105977790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:27,0 chr2 105977791 . G . PASS END=105977836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1064:0,80,255:34,0 chr2 105977837 . C . PASS END=105977837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:26,0 chr2 105977838 . A . PASS END=105977838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr2 105977839 . G . PASS END=105977845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 105977846 . T . PASS END=105977867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 105977868 . A . PASS END=105977890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 105977891 . C . PASS END=105977891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 105979742 . C . PASS END=105979754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,907:0,61,255:26,0 chr2 105979755 . G . PASS END=105979768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr2 105979769 . A . PASS END=105979769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 105979770 . C . PASS END=105979771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 105979772 . T . PASS END=105979772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr2 105979773 . C . PASS END=105979776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 105979777 . G . PASS END=105979777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 105979778 . C . PASS END=105979787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 105979788 . A . PASS END=105979789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 105979790 . A . PASS END=105979799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1057:0,87,255:29,0 chr2 105979800 . C . PASS END=105979815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:29:0,63,945:0,76,255:26,0 chr2 105979816 . T . PASS END=105979821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 105979822 . C . PASS END=105979856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,68,255:26,0 chr2 105979857 . G . PASS END=105979860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:27,0 chr2 105979861 . G . PASS END=105979893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,62,255:26,0 chr2 105979894 . T . PASS END=105979914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,675:0,48,255:19,0 chr2 105979915 . C . PASS END=105979915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 105979916 . C . PASS END=105979921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 105979922 . T . PASS END=105979922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 105979923 . G . PASS END=105979928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 105984027 . C . PASS END=105984035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 105984036 . C . PASS END=105984039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 105984040 . A . PASS END=105984047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 105984048 . C . PASS END=105984061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,831:0,69,255:24,0 chr2 105984062 . T . PASS END=105984063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 105984064 . T . PASS END=105984065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 105984066 . A . PASS END=105984066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 105984067 . T . PASS END=105984072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 105984073 . G . PASS END=105984078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 105984079 . C . PASS END=105984079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr2 105984080 . A . PASS END=105984142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1035:0,84,255:34,0 chr2 105984143 . A . PASS END=105984166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,853:0,63,255:26,0 chr2 105984167 . T . PASS END=105984167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 105984168 . G . PASS END=105984170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 105984171 . G . PASS END=105984192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:18,0 chr2 105984193 . G . PASS END=105984193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr2 105984194 . T . PASS END=105984196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 105984202 . A . PASS END=105984202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 105990016 . C . PASS END=105990170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:39:0,81,1405:0,81,255:40,0 chr2 105990171 . C . PASS END=105990171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr2 105990172 . G . PASS END=105990190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1257:0,89,255:35,0 chr2 105994566 . T . PASS END=105994568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 105994569 . G . PASS END=105994574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 106002776 . C . PASS END=106002997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:34:0,89,1221:0,89,255:40,0 chr2 106013104 . C . PASS END=106013154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:56:0,119,1800:0,119,255:40,0 chr2 106015299 . C . PASS END=106015300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 106015301 . G . PASS END=106015301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 106015302 . T . PASS END=106015307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 106015308 . C . PASS END=106015315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 106015316 . G . PASS END=106015316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 106015317 . C . PASS END=106015324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 106015325 . C . PASS END=106015325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 106015326 . C . PASS END=106015327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 106015328 . T . PASS END=106015328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,427:0,3,255:13,0 chr2 106015329 . C . PASS END=106015332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 106015333 . T . PASS END=106015333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 106015334 . T . PASS END=106015334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 106015335 . G . PASS END=106015343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 106015344 . A . PASS END=106015344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 106015345 . C . PASS END=106015345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 106015346 . C . LowGQ END=106015346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr2 106015347 . G . PASS END=106015361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:12,0 chr2 106015362 . T . PASS END=106015362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 106015363 . T . PASS END=106015371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:15,0 chr2 106015372 . T . PASS END=106015382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 106015383 . C . PASS END=106015420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:19,0 chr2 106015421 . A . PASS END=106015422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 106015423 . T . PASS END=106015455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 106015456 . C . PASS END=106015469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 106015470 . G . PASS END=106015470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 106015471 . C . PASS END=106015536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 106015537 . A . PASS END=106015549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 106015550 . T . PASS END=106015553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 106015679 . C . PASS END=106015680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr2 106015681 . T . LowGQ END=106015681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,239:3,0,242:8,0 chr2 106015682 . T . PASS END=106015682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 106015683 . T . PASS END=106015684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 106015685 . T . PASS END=106015685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 106015686 . T . PASS END=106015710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:11,0 chr2 106015711 . C . PASS END=106015711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 106015712 . T . PASS END=106015720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 106015721 . T . PASS END=106015721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 106015722 . G . PASS END=106015723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 106015724 . G . PASS END=106015727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 106015728 . A . PASS END=106015728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 106015729 . C . PASS END=106015729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 106015730 . A . PASS END=106015730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 106015731 . G . PASS END=106015740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 106015741 . G . PASS END=106015741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:17,0 chr2 106015742 . G . PASS END=106015745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 106015746 . G . PASS END=106015746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 106015747 . T . PASS END=106015754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr2 106015755 . G . PASS END=106015755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:18,0 chr2 106015756 . G . PASS END=106015765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 106015766 . T . PASS END=106015766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:19,0 chr2 106015767 . C . PASS END=106015774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr2 106015775 . A . PASS END=106015783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,664:0,60,255:23,0 chr2 106015784 . C . PASS END=106015784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 106015785 . G . PASS END=106015790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 106015791 . T . PASS END=106015791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 106015792 . G . PASS END=106015800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 106015801 . G . PASS END=106015803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,981:0,87,255:29,0 chr2 106015804 . A . PASS END=106015804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 106015805 . G . PASS END=106015810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 106015811 . T . PASS END=106015811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:26,0 chr2 106015812 . G . PASS END=106015956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1100:0,80,255:40,0 chr2 106015957 . T . PASS END=106015986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 106015987 . C . PASS END=106016002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,47,255:17,0 chr2 106471520 . A . PASS END=106471523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr2 106471524 . C . PASS END=106471525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 106471526 . G . PASS END=106471527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 106471528 . A . PASS END=106471551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,770:0,63,255:26,0 chr2 106471552 . G . PASS END=106471641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1241:0,81,255:39,0 chr2 106471642 . G . PASS END=106471642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr2 106471643 . A . PASS END=106471672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:36,0 chr2 106471673 . C . PASS END=106471679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:34:0,75,1125:0,86,255:26,0 chr2 106471680 . A . PASS END=106471685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,96,255:28,0 chr2 106471686 . T . PASS END=106471692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr2 106471693 . G . PASS END=106471699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:25:0,54,810:0,75,255:19,0 chr2 106471700 . A . PASS END=106471700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,799:0,33,255:18,0 chr2 106471701 . G . PASS END=106471701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 106471702 . C . PASS END=106471714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 106471715 . T . PASS END=106471715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 106471716 . C . PASS END=106471732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 106471733 . A . PASS END=106471745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 106497784 . G . PASS END=106497811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,832:0,69,255:25,0 chr2 106497812 . C . PASS END=106497812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 106497813 . G . PASS END=106497815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 106497816 . C . PASS END=106497816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr2 106497817 . G . PASS END=106497831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr2 106497832 . C . PASS END=106497832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr2 106497833 . G . PASS END=106497850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 106497851 . G . PASS END=106497854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 106497855 . C . PASS END=106497855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 106497856 . C . PASS END=106497856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 106497857 . C . PASS END=106497865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 106497866 . C . PASS END=106497867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 106497868 . G . PASS END=106497881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 106497882 . A . PASS END=106497882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:23,0 chr2 106497883 . T . PASS END=106497935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,848:0,61,255:26,0 chr2 106497936 . G . PASS END=106497939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 106497940 . A . PASS END=106497941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 106497942 . G . PASS END=106497945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 106497946 . T . PASS END=106497986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,961:0,65,255:27,0 chr2 106497987 . T . PASS END=106497990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1048:0,54,255:26,0 chr2 106497991 . G . PASS END=106497996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 106497997 . G . PASS END=106498042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr2 106498043 . C . PASS END=106498043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr2 106498044 . A . PASS END=106498073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1078:0,84,255:30,0 chr2 106498074 . G . PASS END=106498092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:26,0 chr2 106498093 . T . PASS END=106498094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 106498095 . C . PASS END=106498103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,931:0,64,255:28,0 chr2 106498104 . C . PASS END=106498115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr2 106498116 . T . PASS END=106498131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr2 106498132 . A . PASS END=106498137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:23:0,54,810:0,69,255:19,0 chr2 106498138 . C . PASS END=106498163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:25,0 chr2 106498164 . C . PASS END=106498188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1157:0,84,255:35,0 chr2 106498189 . A . PASS END=106498189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:35,0 chr2 106498190 . G . PASS END=106498303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:36:0,88,1197:0,88,255:40,0 chr2 106498304 . A . PASS END=106498304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr2 106498305 . A . PASS END=106498346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1257:0,89,255:34,0 chr2 106498347 . G . PASS END=106498347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 106498348 . C . PASS END=106498351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 106498352 . C . PASS END=106498358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:24,0 chr2 106498359 . C . PASS END=106498361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 106498362 . A . PASS END=106498375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,67,255:22,0 chr2 106498376 . G . PASS END=106498376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 106498377 . C . PASS END=106498387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 106498388 . C . PASS END=106498388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,659:0,16,255:19,0 chr2 106498389 . G . PASS END=106498389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:20,0 chr2 106498390 . G . PASS END=106498407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:22,0 chr2 106498408 . A . PASS END=106498408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr2 106498409 . G . PASS END=106498410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 106498411 . G . PASS END=106498411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 106498412 . G . PASS END=106498427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:24,0 chr2 106498428 . A . PASS END=106498428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 106498429 . C . PASS END=106498429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 106498430 . G . PASS END=106498430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 106498431 . C . PASS END=106498434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 106498435 . A . PASS END=106498435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr2 106498436 . C . PASS END=106498436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 106498437 . C . PASS END=106498443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 106498444 . A . PASS END=106498444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:18,0 chr2 106498445 . G . PASS END=106498482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr2 106498483 . T . PASS END=106498483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,576:0,23,255:17,0 chr2 106498484 . C . PASS END=106498499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,615:0,54,255:18,0 chr2 106498500 . T . PASS END=106498502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:13,0 chr2 106498503 . T . PASS END=106498503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:11,0 chr2 106498504 . C . PASS END=106498505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:18:0,33,495:0,54,255:11,0 chr2 106509438 . C . PASS END=106509470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 106509471 . G . PASS END=106509474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 106509475 . A . PASS END=106509475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 106509476 . G . PASS END=106509516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,498:0,41,255:19,0 chr2 106509517 . G . PASS END=106509529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 106509530 . G . PASS END=106509532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 106509533 . C . PASS END=106509536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 106509537 . C . PASS END=106509547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 106509548 . C . PASS END=106509548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 106509549 . G . PASS END=106509562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr2 106509563 . C . PASS END=106509573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,656:0,63,255:21,0 chr2 106509574 . C . PASS END=106509574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 106509575 . G . PASS END=106509587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 106509588 . A . PASS END=106509599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 106509600 . G . PASS END=106509602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 106509603 . A . PASS END=106509631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,527:0,42,255:19,0 chr2 106509632 . A . PASS END=106509632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 106682221 . A . PASS END=106682247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,660:0,54,255:19,0 chr2 106682248 . G . PASS END=106682256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 106682257 . C . PASS END=106682257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 106682258 . T . PASS END=106682261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 106682262 . C . PASS END=106682263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 106682264 . G . PASS END=106682277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 106682278 . C . PASS END=106682289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,662:0,46,255:19,0 chr2 106682290 . T . PASS END=106682290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr2 106682291 . G . PASS END=106682299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,714:0,57,255:19,0 chr2 106687377 . A . PASS END=106687377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1263:0,64,255:33,0 chr2 106687378 . T . PASS END=106687456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,84,255:40,0 chr2 106687457 . A . PASS END=106687461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:29:0,72,1080:0,87,255:26,0 chr2 106688300 . G . PASS END=106688347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:82:0,120,1800:0,208,255:40,0 chr2 106690342 . C . PASS END=106690343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 106690344 . C . PASS END=106690363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,975:0,81,255:32,0 chr2 106690364 . A . PASS END=106690364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr2 106690365 . G . PASS END=106690425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1097:0,83,255:35,0 chr2 106690426 . A . PASS END=106690426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr2 106690427 . G . PASS END=106690429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 106690430 . G . PASS END=106690430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 106690431 . T . PASS END=106690482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1163:0,80,255:32,0 chr2 106690483 . T . PASS END=106690484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 106690485 . G . PASS END=106690485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:25,0 chr2 106690486 . G . PASS END=106690499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr2 106694221 . A . PASS END=106694382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:35:0,99,1418:0,104,255:40,0 chr2 106710482 . T . PASS END=106710599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:38:0,93,1395:0,110,255:40,0 chr2 106710600 . T . PASS END=106710600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1136:0,58,255:33,0 chr2 106710601 . C . PASS END=106710602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,105,1575:0,111,255:35,0 chr2 106710603 . T . PASS END=106710603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:30,0 chr2 106710604 . C . PASS END=106710613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:32,0 chr2 106713174 . C . PASS END=106713176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 106713177 . G . PASS END=106713177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 106713178 . G . PASS END=106713265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1120:0,80,255:40,0 chr2 106713266 . C . PASS END=106713266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr2 106713267 . A . PASS END=106713277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,95,255:35,0 chr2 106715172 . C . PASS END=106715229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:74:0,120,1800:0,129,255:40,0 chr2 106717503 . G . PASS END=106717574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:94:36:0,94,1296:0,94,255:40,0 chr2 106721250 . C . PASS END=106721288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,125,255:40,0 chr2 106721289 . T . PASS END=106721289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1402:0,72,255:40,0 chr2 106721290 . A . PASS END=106721293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,128,255:40,0 chr2 106729099 . T . PASS END=106729104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr2 106729105 . G . PASS END=106729109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:17,0 chr2 106729110 . G . PASS END=106729110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 106729111 . C . PASS END=106729116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,629:0,41,255:19,0 chr2 106729117 . C . PASS END=106729126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr2 106729127 . T . PASS END=106729137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 106729138 . G . PASS END=106729162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:23,0 chr2 106729163 . A . PASS END=106729163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr2 106729164 . T . PASS END=106729179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,839:0,69,255:23,0 chr2 106729180 . A . PASS END=106729180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 106729181 . A . PASS END=106729181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 106729182 . A . PASS END=106729182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr2 106729183 . G . PASS END=106729194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:22,0 chr2 106729195 . T . PASS END=106729195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr2 106729196 . C . PASS END=106729203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 106729204 . T . PASS END=106729221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,637:0,40,255:19,0 chr2 106739426 . C . PASS END=106739536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:29:0,87,1094:0,87,255:40,0 chr2 106739537 . G . PASS END=106739547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 106742076 . C . PASS END=106742101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:44:0,120,1800:0,128,255:40,0 chr2 106742102 . A . PASS END=106742135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,105,1575:0,113,255:40,0 chr2 106746130 . C . PASS END=106746234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,111,1665:0,126,255:40,0 chr2 106761646 . C . PASS END=106761650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 106761651 . A . PASS END=106761660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1341:0,93,255:35,0 chr2 106761661 . G . PASS END=106761661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr2 106761662 . C . PASS END=106761864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:39:0,82,1388:0,82,255:40,0 chr2 106761865 . A . PASS END=106761865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1348:0,78,255:35,0 chr2 106761866 . G . PASS END=106761881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,99,1485:0,108,255:36,0 chr2 106761882 . T . PASS END=106761882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr2 106761883 . G . PASS END=106761889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:36,0 chr2 106761890 . A . PASS END=106761890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:29,0 chr2 106761891 . G . PASS END=106761899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr2 106761900 . A . PASS END=106761903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:31:0,65,1125:0,65,255:29,0 chr2 106761904 . A . PASS END=106761904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,992:0,38,255:23,0 chr2 106761905 . C . PASS END=106761907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 106774514 . C . PASS END=106774574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:76:0,120,1800:0,176,255:40,0 chr2 106776459 . C . PASS END=106776480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1063:0,84,255:30,0 chr2 106776481 . C . PASS END=106776482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 106776483 . C . PASS END=106776487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 106776488 . G . PASS END=106776488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr2 106776489 . A . PASS END=106776489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 106776490 . A . PASS END=106776508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,986:0,78,255:26,0 chr2 106780123 . C . PASS END=106780166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:104:0,120,1800:0,255,255:40,0 chr2 106781192 . C . PASS END=106781255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:73:0,120,1800:0,174,255:40,0 chr2 106782512 . C . PASS END=106782539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:90:0,120,1800:0,234,255:40,0 chr2 106809654 . C . PASS END=106809729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,117,1755:0,121,255:40,0 chr2 106810604 . A . PASS END=106810608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,729:0,57,255:19,0 chr2 106810609 . A . PASS END=106810620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:22,0 chr2 106810621 . A . PASS END=106810621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 106810622 . A . PASS END=106810623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 106810624 . G . PASS END=106810625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 106810626 . G . PASS END=106810635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 106810636 . A . PASS END=106810636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 106810637 . G . PASS END=106810640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr2 106810641 . C . PASS END=106810641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 106810642 . T . PASS END=106810645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 106810646 . T . PASS END=106810653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:19,0 chr2 106810654 . C . PASS END=106810654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:18,0 chr2 106810655 . G . PASS END=106810666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:19,0 chr2 106810667 . A . PASS END=106810672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 106810673 . G . PASS END=106810682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 106810683 . C . PASS END=106810689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:20:0,33,495:0,60,255:13,0 chr2 106810690 . C . PASS END=106810693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:16:0,36,540:0,48,255:12,0 chr2 106810694 . C . PASS END=106810697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:25:14:0,25,405:0,25,255:9,0 chr2 106986224 . A . PASS END=106986325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,148,255:40,0 chr2 106987395 . G . PASS END=106987395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 106987396 . A . PASS END=106987589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:83:29:0,83,1078:0,83,255:40,0 chr2 106987590 . T . PASS END=106987605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,945:0,69,255:24,0 chr2 106987606 . C . PASS END=106987611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:19,0 chr2 106987612 . T . PASS END=106987615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:21:0,30,450:0,63,255:12,0 chr2 106988690 . T . PASS END=106988698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:28,0 chr2 106988699 . T . PASS END=106988699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 106988700 . T . PASS END=106988704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr2 106988705 . T . PASS END=106988705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 106988706 . G . PASS END=106988707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 106988708 . G . PASS END=106988708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 106988709 . T . PASS END=106988709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 106988710 . T . PASS END=106988719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:28,0 chr2 106988720 . C . PASS END=106988722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1023:0,81,255:27,0 chr2 106988723 . T . PASS END=106988723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 106988724 . T . PASS END=106988724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 106988725 . T . PASS END=106988725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr2 106988726 . T . PASS END=106988727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 106988728 . C . PASS END=106988728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:23,0 chr2 106988729 . A . PASS END=106988749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,828:0,65,255:25,0 chr2 106988750 . T . PASS END=106988750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,750:0,47,255:25,0 chr2 106988751 . T . PASS END=106988754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,925:0,78,255:26,0 chr2 106988755 . G . PASS END=106988755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:21,0 chr2 106988756 . C . PASS END=106988764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:23,0 chr2 106988765 . G . PASS END=106988766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:21,0 chr2 106988767 . C . PASS END=106988767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 106988768 . T . PASS END=106988768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr2 106988769 . C . PASS END=106988772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 106988773 . A . PASS END=106988777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:51:23:0,51,765:0,58,255:19,0 chr2 106988778 . C . PASS END=106988792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,698:0,57,255:19,0 chr2 106988793 . T . PASS END=106988793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,533:0,7,255:15,0 chr2 106988794 . C . PASS END=106988808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:18,0 chr2 106988809 . C . PASS END=106988809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 106988810 . T . PASS END=106988814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr2 106988815 . A G, 84.50 PASS DP=17;MQ=29.46;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,9,0:0,8,0:48:122,51,0,651,51,651:255,51,0:0,0:8.4496e+01,4.8162e+01,6.6269e-05,4.5000e+02,8.2932e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,13:0,0,6,11 chr2 106988816 . C . PASS END=106988818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 106988819 . C . PASS END=106988819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 106988820 . T . PASS END=106988826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,560:0,51,255:17,0 chr2 106988827 . C . PASS END=106988827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 106988828 . A . PASS END=106988834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,623:0,51,255:18,0 chr2 106988835 . A . PASS END=106988835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr2 106988836 . C . PASS END=106988837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 106988838 . G . PASS END=106988838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 106988839 . A . PASS END=106988845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 106988846 . T . PASS END=106988852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 106988853 . G . PASS END=106988853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 106988854 . A . PASS END=106988856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 106988857 . T . PASS END=106988880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,374:0,30,255:12,0 chr2 106988881 . A . PASS END=106988888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 106988889 . A . PASS END=106988889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 106988890 . C . PASS END=106988899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 106992907 . A . PASS END=106992907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:72:50:0,72,1080:0,134,255:24,0 chr2 106992908 . G . PASS END=106992912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:54:50:0,54,810:0,133,255:19,0 chr2 106992913 . A . PASS END=106992918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:45:51:0,45,675:0,136,255:18,0 chr2 106992919 . A . PASS END=106992926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:30:51:0,30,450:0,101,255:13,0 chr2 106992927 . C . PASS END=106992938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:21:54:0,21,315:0,129,255:9,0 chr2 106992939 . T . PASS END=106992946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:12:54:0,12,180:0,129,255:6,0 chr2 106992947 . G . LowGQ END=106992951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:54,0:54:0:53:0,0,0:0,143,255:3,0 chr2 106992952 . A G, 198.23 PASS DP=52;MQ=51.99;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,52,0:1.000,0.000:52:0,25,0:0,27,0:153:236,156,0,1941,156,1941:255,159,0:0,0:1.9823e+02,1.5258e+02,0.0000e+00,4.5000e+02,1.8735e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,18:0,0,25,27:106992952 chr2 106992953 . T . LowGQ END=106992962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:52,1:53:0:51:0,0,0:0,125,255:0,1 chr2 106992963 . A AG, 196.15 PASS DP=51;MQ=51.99;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,51,0:1.000,0.000:51:0,25,0:0,26,0:151:228,154,0,2039,154,2039:255,101,0:0,73:1.9615e+02,1.5050e+02,0.0000e+00,4.5000e+02,1.8527e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,33,18:0,0,25,26:106992952 chr2 106992964 . T . LowGQ END=106992964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,51:52:0:52:0,0,0:255,117,0:40,0 chr2 106992965 . T . PASS END=106992965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 106992966 . C . PASS END=106992966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1740:0,79,255:40,0 chr2 106992967 . C . PASS END=106992979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,123,255:40,0 chr2 107007935 . C . PASS END=107007951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:96:0,120,1800:0,253,255:40,0 chr2 107007952 . T . PASS END=107007969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:93:0,120,1800:0,234,255:40,0 chr2 107021675 . T . PASS END=107021685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:90:0,120,1800:0,232,255:40,0 chr2 107029540 . C . PASS END=107029741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:46:0,109,1786:0,109,255:40,0 chr2 107032306 . C . PASS END=107032316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,164,255:40,0 chr2 107032317 . C . PASS END=107032379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:70:0,120,1800:0,210,255:40,0 chr2 107032380 . T . PASS END=107032416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:72:0,120,1800:0,200,255:40,0 chr2 107032417 . A G, 253.07 PASS DP=72;MQ=40.40;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,32,0:0,40,0:212:291,215,0,2696,215,2696:255,216,0:0,0:2.5307e+02,2.1232e+02,0.0000e+00,4.5000e+02,2.4709e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,39:0,0,39,33 chr2 107032418 . G . PASS END=107032445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:44:0,105,1575:0,115,255:40,0 chr2 107039499 . C . PASS END=107039964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:35:0,81,1166:0,81,255:40,0 chr2 107039965 . C . PASS END=107040040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,893:0,62,255:26,0 chr2 107040041 . A . PASS END=107040041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 107040042 . A . PASS END=107040056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,990:0,65,255:25,0 chr2 107040057 . A . PASS END=107041722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:81:30:0,81,1147:0,90,255:40,2 chr2 107042450 . C . PASS END=107042450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 107042451 . T . PASS END=107042501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:46:0,120,1800:0,121,255:40,0 chr2 107042502 . G . PASS END=107042544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:103:0,120,1800:0,176,255:40,0 chr2 107044586 . T . PASS END=107044698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:45:0,120,1800:0,135,255:40,0 chr2 107046102 . C . PASS END=107046102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr2 107046103 . T . PASS END=107046115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr2 107046116 . C . PASS END=107046126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:14:0,33,495:0,37,255:13,0 chr2 107046127 . C . PASS END=107046186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:16,0 chr2 107046187 . A . PASS END=107046187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 107046188 . T . PASS END=107046228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,545:0,48,255:17,0 chr2 107046229 . C . PASS END=107046232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 107046233 . T . PASS END=107046237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 107049391 . C . PASS END=107049391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 107049392 . T . PASS END=107049392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:17:50:0,17,1568:0,17,255:40,0 chr2 107049393 . T . PASS END=107049474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:50:0,120,1800:0,134,255:40,0 chr2 107049562 . C . PASS END=107049676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:172,0:172:99:119:0,120,1800:0,255,255:40,0 chr2 107049677 . T . PASS END=107049713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:148,0:148:99:117:0,120,1800:0,255,255:40,0 chr2 107049714 . C G, 27.38 PASS DP=118;MQ=25.04;MQRankSum=0.834;ReadPosRankSum=4.076;FractionInformativeReads=0.992;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:71,46,0:0.393,0.000:117:34,18,0:37,28,0:27:62,0,31,1645,2534,4180:255,0,255:40,0:2.7381e+01,9.6743e-03,3.4010e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,43,17,29:43,28,21,25 chr2 107049715 . T . PASS END=107049741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:65:0,120,1800:0,190,255:40,0 chr2 107050684 . T . PASS END=107050830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:85:36:0,85,1160:0,85,255:40,0 chr2 107051093 . C . LowDepth;LowGQ END=107051230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr2 107051497 . C . PASS END=107051501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 107051502 . T . PASS END=107051508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 107051509 . A . PASS END=107051509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 107051510 . C . PASS END=107051531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,771:0,66,255:26,0 chr2 107051532 . G . PASS END=107051533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 107051534 . T . PASS END=107051534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 107051535 . C . PASS END=107051536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 107051537 . A . PASS END=107051537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr2 107051538 . T . PASS END=107051542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1009:0,87,255:29,0 chr2 107051543 . T . PASS END=107051545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1025:0,71,255:28,0 chr2 107051546 . G . PASS END=107051560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1133:0,80,255:33,0 chr2 107051561 . T . PASS END=107051574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,69,255:31,0 chr2 107051575 . C . PASS END=107051575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr2 107051576 . A . PASS END=107051576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 107051577 . A . PASS END=107051578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 107051579 . A . PASS END=107051579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 107051580 . A . PASS END=107051580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 107051581 . T . PASS END=107051581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 107051582 . G . PASS END=107051583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 107051584 . C . PASS END=107051584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 107051585 . A . PASS END=107051589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 107051590 . T . PASS END=107051590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr2 107051591 . T . PASS END=107051592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:30,0 chr2 107051593 . C . PASS END=107051594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:30,0 chr2 107051595 . T . PASS END=107051595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 107051596 . C . PASS END=107051596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 107051597 . C . PASS END=107051597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 107051598 . A . PASS END=107051598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 107051599 . A . PASS END=107051605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 107051606 . A . PASS END=107051607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1003:0,54,255:31,1 chr2 107051608 . A . PASS END=107051649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1061:0,82,255:33,0 chr2 107051650 . A . PASS END=107051650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1093:0,69,255:29,0 chr2 107051651 . C . PASS END=107051658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 107052579 . C . PASS END=107052702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:45:0,104,1623:0,104,255:40,0 chr2 107052870 . A . PASS END=107053045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:89:37:0,89,1396:0,89,255:40,0 chr2 107053129 . T . PASS END=107053247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:34:0,90,1350:0,96,255:40,0 chr2 107053248 . A . PASS END=107053248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:29,0 chr2 107053249 . A . PASS END=107053255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:31,0 chr2 107053256 . T . PASS END=107053256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:28,0 chr2 107053257 . G . PASS END=107053264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr2 107053265 . A . PASS END=107053282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,65,255:24,0 chr2 107053283 . A . PASS END=107053283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr2 107053284 . G . PASS END=107053285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 107053286 . C . PASS END=107053299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:30:13:0,30,450:0,39,255:13,0 chr2 107053300 . T . PASS END=107053307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 107053308 . C . PASS END=107053310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 107055424 . C . LowDepth;LowGQ END=107055633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 107057749 . C . PASS END=107057832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,86,255:37,0 chr2 107057833 . G . PASS END=107057836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr2 107063874 . C . PASS END=107063921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr2 107063922 . C . PASS END=107063949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 107063950 . A . PASS END=107063963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 107063964 . A . PASS END=107063964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 107063965 . G . PASS END=107063967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr2 107063968 . C . PASS END=107063968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 107063969 . C . PASS END=107063969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,178:0,4,178:5,0 chr2 107063970 . A . PASS END=107063987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr2 107063988 . T . PASS END=107063988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,161:0,1,161:5,0 chr2 107063989 . C . PASS END=107064013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,186:0,18,186:6,0 chr2 107064014 . A . PASS END=107064014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 107064015 . C . PASS END=107064047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr2 107064048 . A . LowGQ END=107064048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 107064049 . G . PASS END=107064058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 107064059 . C . LowGQ END=107064069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,90:0,0,104:2,0 chr2 107068661 . C . PASS END=107068680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,164:0,15,164:5,0 chr2 107068681 . T . PASS END=107068723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 107068724 . G . PASS END=107068732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 107068733 . A . PASS END=107068733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 107068734 . G . PASS END=107068754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 107068755 . C . PASS END=107068777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 107068778 . T . PASS END=107068778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 107068779 . C . PASS END=107068806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 107069152 . C . LowGQ END=107069198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,31:0,0,31:3,0 chr2 107069199 . A . PASS END=107069250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 107069251 . T . LowGQ END=107069251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr2 107069252 . T . PASS END=107069259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,103:0,12,103:4,0 chr2 107069260 . G . LowGQ END=107069348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,39:3,0 chr2 107069349 . A . LowDepth;LowGQ END=107069382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 107073427 . C . PASS END=107073451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,154,255:40,0 chr2 107073452 . C . PASS END=107073488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,215,255:40,0 chr2 107073489 . C . LowGQ END=107073489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,14:110:0:110:0,0,3058:212,0,255:40,0 chr2 107073490 . T . PASS END=107073526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:109:0,120,1800:0,255,255:40,0 chr2 107073527 . T . PASS END=107073579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,1:121:99:99:0,120,1800:0,255,255:40,0 chr2 107074023 . C . PASS END=107074027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1305:0,100,255:31,0 chr2 107074028 . A . PASS END=107074044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,970:0,67,255:27,0 chr2 107074045 . T . PASS END=107074061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:31,0 chr2 107074062 . T . PASS END=107074062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 107074063 . T . PASS END=107074066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 107074067 . A . PASS END=107074067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 107074068 . A . PASS END=107074082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 107074083 . T . PASS END=107074083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 107074084 . C . PASS END=107074086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 107074087 . T . PASS END=107074109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:26,0 chr2 107074110 . C . PASS END=107074120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,46,255:16,0 chr2 107074121 . A . PASS END=107074125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:16:0,30,450:0,34,255:11,0 chr2 107074126 . C . PASS END=107074132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:25:11:0,25,405:0,25,255:9,0 chr2 107074133 . A . PASS END=107074134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 107074566 . C . PASS END=107074570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 107074571 . A . PASS END=107074571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 107074572 . A . PASS END=107074587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,635:0,65,255:22,0 chr2 107074588 . C . PASS END=107074588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 107074589 . T . PASS END=107074591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 107074592 . C . PASS END=107074593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr2 107074594 . G . PASS END=107074598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,680:0,63,255:21,0 chr2 107074599 . A . PASS END=107074599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,654:0,24,255:20,0 chr2 107074600 . T . PASS END=107074600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 107074601 . A . PASS END=107074601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,660:0,46,255:20,0 chr2 107074602 . T . PASS END=107074608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,663:0,63,255:21,0 chr2 107075721 . T . PASS END=107075788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,149,255:40,0 chr2 107084673 . C . PASS END=107084673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 107084674 . T . PASS END=107084678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1048:0,62,255:30,0 chr2 107084679 . A . PASS END=107084679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 107084680 . G . PASS END=107084680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 107084681 . G . PASS END=107084744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1180:0,83,255:37,0 chr2 107087257 . C . PASS END=107087309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,179,255:40,0 chr2 107091499 . T . PASS END=107091621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:68:0,120,1800:0,189,255:40,0 chr2 107092112 . C . PASS END=107092273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:91:36:0,91,1227:0,91,255:40,0 chr2 107093913 . C . PASS END=107093924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1381:0,87,255:40,0 chr2 107093925 . G . PASS END=107093925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:40,0 chr2 107093926 . T . PASS END=107094125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:42:0,87,1399:0,87,255:40,0 chr2 107103883 . A . PASS END=107103902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 107103903 . C . PASS END=107103925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:12,0 chr2 107107330 . T . PASS END=107107644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:34:0,81,1169:0,81,255:40,0 chr2 107107645 . G . PASS END=107107649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 107107650 . C . PASS END=107107650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 107107651 . C . PASS END=107107651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 107107652 . C . PASS END=107107652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 107107653 . G . PASS END=107107653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 107107654 . A . PASS END=107107656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 107107657 . T . PASS END=107107659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 107107660 . C . PASS END=107107660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 107107661 . C . PASS END=107107661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 107107662 . T . PASS END=107107663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 107107664 . C . PASS END=107107665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 107107666 . G . PASS END=107107667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 107107668 . A . PASS END=107107688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:26,0 chr2 107107689 . G . PASS END=107107689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 107112629 . T . PASS END=107112629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:30,0 chr2 107112630 . T . PASS END=107112670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1081:0,82,255:33,0 chr2 107112671 . C . PASS END=107112680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:30:0,63,945:0,77,255:23,0 chr2 107112681 . G . PASS END=107112681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:21,0 chr2 107112682 . A . PASS END=107112695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 107112696 . A . PASS END=107112696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr2 107112697 . C . PASS END=107112711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 107112712 . C . PASS END=107112718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 107118930 . G . PASS END=107118933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1466:0,107,255:38,0 chr2 107118934 . A . PASS END=107119019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,105,1575:0,120,255:40,0 chr2 107120745 . G . PASS END=107120781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:34:0,93,1247:0,95,255:37,0 chr2 107123326 . G . PASS END=107123446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:52:0,108,1620:0,131,255:40,0 chr2 107160448 . A . PASS END=107160493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,148,255:40,0 chr2 107423134 . T . PASS END=107423139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:10,0 chr2 107423140 . G . PASS END=107423140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 107423141 . T . PASS END=107423159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 107423160 . G . PASS END=107423193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:18,0 chr2 107423194 . A . PASS END=107423194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,566:0,37,255:15,0 chr2 107423195 . A . PASS END=107423197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 107423198 . A . PASS END=107423198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 107423199 . C . PASS END=107423228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr2 107423229 . T . PASS END=107423229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 107423230 . G . PASS END=107423231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 107423232 . C . PASS END=107423247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 107423248 . C . PASS END=107423267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:18,0 chr2 107423268 . G . PASS END=107423281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:22,0 chr2 107423282 . G . PASS END=107423282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr2 107423283 . C . PASS END=107423293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr2 107423294 . C . PASS END=107423294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 107423295 . A . PASS END=107423297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr2 107423298 . C . PASS END=107423298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 107423299 . T . PASS END=107423299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 107423300 . G . PASS END=107423302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 107423303 . T . PASS END=107423313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr2 107423314 . C . PASS END=107423314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 107423315 . T . PASS END=107423317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 107423318 . T . PASS END=107423325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 107423326 . G . PASS END=107423328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 107423329 . C . PASS END=107423334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 107423335 . C . PASS END=107423346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 107423347 . G . PASS END=107423347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 107423348 . G . PASS END=107423348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 107423349 . A . PASS END=107423357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 107423358 . A . PASS END=107423376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,607:0,41,255:19,0 chr2 107423377 . T . PASS END=107423377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,567:0,10,255:16,0 chr2 107423378 . C . PASS END=107423378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 107423379 . T . PASS END=107423379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr2 107423380 . G . PASS END=107423380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 107423381 . C . PASS END=107423381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:17,0 chr2 107423382 . A . PASS END=107423393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr2 107423394 . T . PASS END=107423394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 107423395 . T G, 95.15 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,10,0:0,6,0:45:133,48,0,612,48,612:255,54,0:0,0:9.5153e+01,4.5153e+01,1.3254e-04,4.5000e+02,7.9923e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,9:0,0,7,9 chr2 107423396 . A . PASS END=107423400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 107423401 . G . PASS END=107423405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:13,0 chr2 107429598 . T . PASS END=107429621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,121,255:40,0 chr2 107429622 . G . PASS END=107429680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:81:0,120,1800:0,165,255:40,0 chr2 107441666 . T . PASS END=107441757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,114,1665:0,119,255:40,1 chr2 107446522 . C . PASS END=107446696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:44:0,116,1584:0,116,255:40,0 chr2 107449021 . C . PASS END=107449122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,133,255:40,0 chr2 107450505 . C . PASS END=107450551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:81:0,120,1800:0,219,255:40,0 chr2 107450552 . C . PASS END=107450588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:68:0,120,1800:0,186,255:40,0 chr2 107450589 . C T, 248.64 PASS DP=67;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,26,0:0,41,0:199:286,202,0,2565,202,2565:255,202,0:0,0:2.4864e+02,1.9864e+02,0.0000e+00,4.5000e+02,2.3341e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,37:0,0,29,38 chr2 107450590 . G . PASS END=107450602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,165,255:40,0 chr2 107459491 . C . PASS END=107459512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,397:0,36,255:12,0 chr2 107459513 . G . PASS END=107459524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,423:0,42,255:14,0 chr2 107459525 . G . PASS END=107459533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 107459534 . C . PASS END=107459542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 107459543 . A . PASS END=107459546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 107459547 . C . PASS END=107459601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 107459602 . G . PASS END=107459603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 107459604 . C . PASS END=107459605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 107459606 . C . PASS END=107459655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,344:0,30,255:13,0 chr2 107459656 . G . PASS END=107459656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 107459657 . C . PASS END=107459660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 107459661 . C . PASS END=107459676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:17,0 chr2 107459677 . A . PASS END=107459677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 107459678 . C . PASS END=107459680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 107459681 . C . PASS END=107459681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 107459682 . A . PASS END=107459697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:16,0 chr2 107459698 . G . PASS END=107459698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 107459699 . C . PASS END=107459702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 107459703 . G . PASS END=107459703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 107459704 . C . PASS END=107459716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:18,0 chr2 107459717 . G . PASS END=107459717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 107459718 . C . PASS END=107459736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,645:0,54,255:19,0 chr2 107459737 . T . PASS END=107459737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 107459738 . G . PASS END=107459765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,609:0,54,255:19,0 chr2 107459766 . T . PASS END=107459766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 107459767 . T . PASS END=107459772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,729:0,54,255:19,0 chr2 107459773 . G . PASS END=107459787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr2 107459788 . T . PASS END=107459797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 107459798 . G . PASS END=107459800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 107459801 . G . PASS END=107459801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:19,0 chr2 107459802 . T . PASS END=107459802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 107459803 . T . PASS END=107459803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 107459804 . C . PASS END=107459828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:24,0 chr2 107459829 . G . PASS END=107459829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 107459830 . C . PASS END=107459869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,856:0,72,255:24,0 chr2 107459870 . C . PASS END=107459884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:19:0,54,654:0,57,255:19,0 chr2 107459885 . G . PASS END=107459886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 107459887 . T . PASS END=107459887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 107459888 . C . PASS END=107459910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr2 107459911 . T . PASS END=107459916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:19,0 chr2 107459917 . C . PASS END=107459922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 107459923 . T . PASS END=107459923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 107459924 . C . PASS END=107459936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 107459937 . G . PASS END=107459937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 107459938 . C . PASS END=107459938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 107459939 . A . PASS END=107459939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 107459940 . G . PASS END=107459955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 107459956 . C . PASS END=107459973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 107459974 . C T, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,14,0:0,10,0:69:157,72,0,928,72,928:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,11:0,0,9,15 chr2 107459975 . G . PASS END=107459976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr2 107459977 . G . PASS END=107459977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 107459978 . G . PASS END=107459979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 107459980 . A . PASS END=107459980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 107459981 . A . PASS END=107460011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,884:0,61,255:26,0 chr2 107460012 . T . PASS END=107460047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:26,0 chr2 107460048 . T . PASS END=107460048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 107460049 . C . PASS END=107460063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 107460064 . A . PASS END=107460071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:19,0 chr2 107460072 . T . PASS END=107460072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,721:0,32,255:19,0 chr2 107460073 . G . PASS END=107460076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,652:0,43,255:19,0 chr2 107460077 . T . PASS END=107460079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 107460080 . T . PASS END=107460080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,599:0,43,255:19,0 chr2 107460081 . C . PASS END=107460089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 107460090 . T . PASS END=107460101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,714:0,46,255:19,0 chr2 107460102 . A . PASS END=107460102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:14,0 chr2 107460103 . A . PASS END=107460103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,604:0,5,255:14,0 chr2 107460104 . C . PASS END=107460109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:16,0 chr2 107460110 . A . PASS END=107460110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 107460111 . T . PASS END=107460116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 107460117 . A . PASS END=107460117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 107460118 . A . PASS END=107460119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 107460120 . C . PASS END=107460129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:16:0,34,540:0,34,255:13,0 chr2 107460130 . A . PASS END=107460130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:11,0 chr2 107460131 . C . PASS END=107460139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 107460140 . T . PASS END=107460141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr2 107460142 . T . PASS END=107460143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 107460144 . T . PASS END=107460144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 107460145 . G . PASS END=107460147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 107460148 . G . PASS END=107460149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:7,0 chr2 107460150 . T . PASS END=107460150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:7,0 chr2 107460151 . C . PASS END=107460166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,288:0,24,255:8,0 chr2 107460167 . A . PASS END=107460167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 107460168 . A . PASS END=107460180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr2 107460181 . G . PASS END=107460181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 107460182 . G . PASS END=107460188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr2 107460189 . C . PASS END=107460189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 107460190 . G . PASS END=107460190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 107460191 . G . PASS END=107460193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 107460194 . C . PASS END=107460194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 107460195 . A . PASS END=107460221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 107460222 . G . PASS END=107460273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:19,0 chr2 107460274 . C . PASS END=107460303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,723:0,60,255:26,0 chr2 107460304 . A . PASS END=107460306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 107460307 . G . PASS END=107460307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 107460308 . G . PASS END=107460312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 107460313 . T . PASS END=107460313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:26,0 chr2 107460314 . G . PASS END=107460418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1218:0,86,255:39,0 chr2 107460419 . C . PASS END=107460419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr2 107460420 . A . PASS END=107460432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1168:0,83,255:32,0 chr2 107460433 . T . PASS END=107460433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 108443470 . A . PASS END=108443471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 108443472 . G . PASS END=108443477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 108443478 . C . PASS END=108443507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1119:0,84,255:30,0 chr2 108443508 . C . PASS END=108443510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 108443511 . C G, 138.04 PASS DP=31;MQ=96.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,18,0:0,13,0:90:176,93,0,1165,93,1165:255,93,0:0,0:1.3804e+02,8.9839e+01,0.0000e+00,4.5000e+02,1.2461e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,18:0,0,16,15 chr2 108443512 . G . PASS END=108443539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 108443540 . A . PASS END=108443541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 108453058 . A . PASS END=108453125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,127,255:40,0 chr2 108454713 . A . LowDepth;LowGQ END=108454824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 108455268 . C . PASS END=108455273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr2 108455274 . G . PASS END=108455278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:5,0 chr2 108455279 . A . PASS END=108455302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:8,0 chr2 108455303 . G T, 29.12 PASS DP=8;MQ=8.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,5,0:0,3,0:20:67,24,0,310,24,310:255,24,0:0,0:2.9117e+01,2.1117e+01,3.9090e-02,3.0727e+02,5.5887e+01,3.1027e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,0:0,0,5,3 chr2 108455304 . G . PASS END=108455337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:19,0 chr2 108455338 . A . PASS END=108455340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 108455341 . T . PASS END=108455354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr2 108455355 . G . PASS END=108455378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,845:0,81,255:28,0 chr2 108455379 . G . PASS END=108455389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 108455390 . C . PASS END=108455394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 108455395 . G . PASS END=108455420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr2 108459465 . G . LowDepth;LowGQ END=108459695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 108460041 . G . LowDepth;LowGQ END=108460062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 108460063 . G . LowDepth END=108460186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 108464797 . T . LowGQ END=108464992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr2 108471012 . G . PASS END=108471023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 108471024 . A . PASS END=108471024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 108471025 . A . PASS END=108471036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 108471037 . T . PASS END=108471037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,1 chr2 108471038 . A . PASS END=108471038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:40:25:0,40,813:0,40,255:22,1 chr2 108471039 . A . PASS END=108471039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 108471040 . A . PASS END=108471041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 108471042 . G . PASS END=108471042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 108471043 . G . PASS END=108471043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 108471044 . T . PASS END=108471073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1024:0,87,255:30,0 chr2 108471074 . G . PASS END=108471094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr2 108471095 . A . PASS END=108471095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:23,0 chr2 108471096 . T . PASS END=108471098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 108471099 . G . PASS END=108471099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 108473216 . G . PASS END=108473242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,156:0,15,156:6,0 chr2 108473243 . G . LowGQ END=108473243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,96:4,0 chr2 108473244 . C . PASS END=108473330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,141:0,12,141:6,0 chr2 108473331 . G . PASS END=108473332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 108473333 . C . PASS END=108473343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,241:6,0 chr2 108473344 . A . PASS END=108473353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 108473354 . T . PASS END=108473354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,178:0,4,178:6,0 chr2 108473355 . T . PASS END=108473355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 108473356 . G . PASS END=108473356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 108473357 . G . PASS END=108473360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 108473361 . C . LowGQ END=108473361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:18,0,212:5,0 chr2 108473362 . G . PASS END=108473369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 108473370 . T . LowGQ END=108473370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,204:5,0 chr2 108473371 . G . PASS END=108473419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,166:0,18,166:6,0 chr2 108473420 . A . PASS END=108473420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 108473421 . T . PASS END=108473425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr2 108475570 . G . PASS END=108475574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr2 108475575 . A . PASS END=108475597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 108475598 . T . PASS END=108475598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 108475599 . C . PASS END=108475621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr2 108475622 . A . PASS END=108475622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 108475623 . C . PASS END=108475635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr2 108475636 . T . PASS END=108475645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 108475646 . A . PASS END=108475676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 108475677 . T . PASS END=108475677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 108475678 . T . PASS END=108475690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:12,0 chr2 108475691 . C . PASS END=108475700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 108475701 . T . PASS END=108475701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 108475702 . C . PASS END=108475737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,468:0,42,255:19,0 chr2 108475738 . T . PASS END=108475738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 108475739 . T . PASS END=108475751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,615:0,40,255:19,0 chr2 108475835 . G . PASS END=108475845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:29,0 chr2 108475846 . T . PASS END=108475846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 108475847 . G . PASS END=108475920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:31:0,87,1305:0,93,255:40,0 chr2 108475921 . C . PASS END=108475957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:91:0,120,1800:0,255,255:40,0 chr2 108475958 . A G, 312.42 PASS DP=92;MQ=28.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,92,0:1.000,0.000:92:0,44,0:0,48,0:273:350,276,0,3505,276,3505:255,255,0:0,0:3.1242e+02,2.7342e+02,0.0000e+00,4.4853e+02,3.0819e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,53,39:0,0,49,43 chr2 108475959 . G . PASS END=108475995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:89:0,120,1800:0,214,255:40,0 chr2 108475996 . T . PASS END=108476010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:75:0,120,1800:0,207,255:40,0 chr2 108476178 . A . PASS END=108476301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:93:33:0,93,1304:0,94,255:40,0 chr2 108477222 . G . PASS END=108477359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:31:0,81,1215:0,93,255:40,0 chr2 108477360 . C . PASS END=108477360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 108477361 . A . PASS END=108477361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:23,0 chr2 108477362 . T . PASS END=108477379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:23,0 chr2 108477380 . T . PASS END=108477383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 108477650 . G . PASS END=108477670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:8,0 chr2 108477671 . G . PASS END=108477671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 108477672 . A . PASS END=108477680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,243:7,0 chr2 108477681 . C . PASS END=108477723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 108477724 . A . PASS END=108477724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 108477725 . G . PASS END=108477729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr2 108477730 . T . LowGQ END=108477730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 108477731 . G . PASS END=108477749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 108477750 . C . LowGQ END=108477778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,1:3:0:3:0,0,61:0,0,69:3,0 chr2 108477779 . C . PASS END=108477782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 108477783 . C . PASS END=108477784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr2 108477785 . C . PASS END=108477787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr2 108478050 . A . PASS END=108478155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:33:0,81,1215:0,86,255:40,1 chr2 108478156 . T . PASS END=108478196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:26,0 chr2 108479138 . T . LowGQ END=108479164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,39:2,0 chr2 108479165 . G C, 5.46 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=10.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4570e+00,4.4715e+00,4.4618e+00,4.0227e+01,3.9242e+01,4.3227e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,0:0,0,1,0 chr2 108479166 . A . LowDepth;LowGQ END=108479213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr2 108479214 . A G, 18.83 PASS DP=2;MQ=12.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,1,0:0,1,0:5:55,6,0,78,6,78:78,6,0:0,0:1.8835e+01,4.8350e+00,1.8155e+00,7.6340e+01,3.9605e+01,7.9340e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,0:0,0,1,1 chr2 108479215 . T . PASS END=108479222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr2 108479223 . A . PASS END=108479229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr2 108479230 . T . LowGQ END=108479230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 108479231 . G . PASS END=108479251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr2 108479252 . T . PASS END=108479254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 108479255 . G . PASS END=108479263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:9,0 chr2 108479264 . C . PASS END=108479270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 108479271 . C . PASS END=108479274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:15,0 chr2 108479275 . A . PASS END=108479276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 108479277 . C . PASS END=108479277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 108479278 . T . PASS END=108479278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 108479279 . C . PASS END=108479296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:18,0 chr2 108479297 . T . PASS END=108479297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 108479298 . C . PASS END=108479307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,630:0,41,255:19,0 chr2 108479308 . A . PASS END=108479310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:21,0 chr2 108479311 . T . PASS END=108479311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 108479312 . T . PASS END=108479312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 108479313 . A . PASS END=108479313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 108479314 . C . PASS END=108479317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,739:0,63,255:24,0 chr2 108479405 . T . PASS END=108479431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,90,255:35,0 chr2 108479432 . G A, 120.62 PASS DP=30;MQ=24.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,17,0:0,13,0:87:158,90,0,1147,90,1147:255,90,0:0,0:1.2062e+02,8.7286e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,17:0,0,18,12 chr2 108479433 . C . PASS END=108479435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 108479436 . A . PASS END=108479436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 108479437 . A . PASS END=108479437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 108479438 . G . PASS END=108479438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr2 108479439 . A . PASS END=108479440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 108479441 . C . PASS END=108479441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 108479442 . A . PASS END=108479452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 108479453 . C . PASS END=108479460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr2 108479461 . G . PASS END=108479462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 108479463 . T . PASS END=108479481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,76,255:26,0 chr2 108479482 . C . PASS END=108479486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,72,255:19,0 chr2 108479487 . A T, 80.56 PASS DP=24;MQ=22.09;MQRankSum=1.589;ReadPosRankSum=0.144;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,23,0:0.958,0.000:24:1,14,0:0,9,0:47:118,50,0,870,86,906:255,33,0:1,0:8.0563e+01,4.7230e+01,8.2318e-05,4.5000e+02,1.1777e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,5,18:0,1,10,13 chr2 108479488 . G . PASS END=108479488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 108482646 . G . PASS END=108482647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 108482648 . A . PASS END=108482659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 108482660 . G . PASS END=108482680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,299:0,30,255:13,0 chr2 108482681 . G . PASS END=108482736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,558:0,45,255:18,0 chr2 108482737 . A . PASS END=108482737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr2 108482738 . T . PASS END=108482758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 108482759 . A . PASS END=108482781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 108484183 . A . PASS END=108484221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1291:0,95,255:39,0 chr2 108484222 . A . PASS END=108484222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:35,0 chr2 108484223 . C . PASS END=108484227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 108484228 . A . PASS END=108484229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1100:0,69,255:33,0 chr2 108484230 . T . PASS END=108484244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:33,0 chr2 108484245 . T . PASS END=108484266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,65,255:29,0 chr2 108484267 . C . PASS END=108484267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr2 108484268 . T . PASS END=108484270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 108484271 . A . PASS END=108484286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:21:0,41,630:0,41,255:19,0 chr2 108484287 . A . PASS END=108484288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,644:0,33,255:14,0 chr2 108484289 . C . PASS END=108484295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:18,0 chr2 108486339 . T . PASS END=108486344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:23,0 chr2 108486345 . C . PASS END=108486345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:22,0 chr2 108486346 . T . LowGQ END=108486346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:0:25:0,0,562:6,0,255:19,0 chr2 108486347 . A . PASS END=108486347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 108486348 . C . PASS END=108486349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,806:0,42,255:23,0 chr2 108486350 . G . PASS END=108486358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,803:0,72,255:24,0 chr2 108486359 . G . PASS END=108486359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 108486360 . T . PASS END=108486361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 108486362 . T . PASS END=108486362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,714:0,55,255:22,0 chr2 108486363 . A . PASS END=108486365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 108486366 . A . PASS END=108486366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 108486367 . T . PASS END=108486368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 108486369 . G . PASS END=108486370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr2 108486371 . C . PASS END=108486371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 108486372 . A . PASS END=108486373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 108486374 . T . PASS END=108486374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,750:0,36,255:22,0 chr2 108486375 . C . PASS END=108486377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 108486378 . C . PASS END=108486379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:24,0 chr2 108486380 . G . PASS END=108486383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 108486384 . A . PASS END=108486384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,790:0,42,255:22,0 chr2 108486385 . T . PASS END=108486392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 108486393 . A . PASS END=108486393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr2 108486394 . G . PASS END=108486394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 108486395 . T . PASS END=108486400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:25:0,47,706:0,47,255:18,0 chr2 108486401 . C . PASS END=108486401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,853:0,23,255:18,0 chr2 108486402 . T . PASS END=108486407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:23:0,54,810:0,58,255:19,0 chr2 108486408 . C . PASS END=108486408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:18,0 chr2 108486409 . A . PASS END=108486412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr2 108486413 . G . PASS END=108486413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:15,0 chr2 108486414 . C . PASS END=108486420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,43,255:16,0 chr2 108486421 . T . PASS END=108486424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,37,255:13,0 chr2 108486425 . C . PASS END=108486426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:15:0,24,360:0,45,255:9,0 chr2 108486427 . C . PASS END=108486432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:18:13:0,18,270:0,22,255:6,0 chr2 108486433 . G . PASS END=108486433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:7,0 chr2 108487161 . G . PASS END=108487292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:63:0,120,1800:0,173,255:40,1 chr2 108487293 . A . PASS END=108487329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:66:0,120,1800:0,198,255:40,0 chr2 108487330 . A G, 233.71 PASS DP=66;MQ=35.70;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,31,0:0,35,0:195:271,198,0,2467,198,2467:255,198,0:0,0:2.3371e+02,1.9471e+02,0.0000e+00,4.5000e+02,2.2948e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,34:0,0,31,35 chr2 108487331 . T . PASS END=108487367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:44:0,111,1665:0,132,255:40,0 chr2 108487368 . T . PASS END=108487784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:41:0,115,1513:0,115,255:40,0 chr2 108487785 . T . PASS END=108487815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:39:0,81,1215:0,117,255:40,0 chr2 108487816 . A . PASS END=108487825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:33:0,66,990:0,99,255:25,0 chr2 108487826 . C T, 118.27 PASS DP=31;MQ=14.73;FractionInformativeReads=0.968 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,30,0:1.000,0.000:30:0,18,0:0,12,0:85:156,88,0,256,256,256:255,93,0:0,0:1.1827e+02,8.5271e+01,0.0000e+00,2.5304e+02,2.8781e+02,2.5605e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,5,25:0,0,13,17:108487826 chr2 108487827 . C . PASS END=108487828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 108487829 . G C, 119.30 PASS DP=30;MQ=14.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,30,0:1.000,0.000:30:0,18,0:0,12,0:86:157,89,0,257,257,257:255,90,0:0,0:1.1930e+02,8.6297e+01,0.0000e+00,2.5407e+02,2.8884e+02,2.5708e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,4,26:0,0,12,18:108487826 chr2 108487830 . T . PASS END=108487840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:26,0 chr2 108487841 . T . PASS END=108487847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:25:0,42,630:0,75,255:19,0 chr2 108487848 . T . PASS END=108487857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:33:16:0,33,495:0,35,255:12,0 chr2 108487858 . C . PASS END=108487880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 108487881 . G . PASS END=108487893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:6:0,18,217:0,18,217:6,0 chr2 108487894 . A . PASS END=108487894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 108487895 . G . PASS END=108487896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 108487897 . G . PASS END=108487897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 108487898 . G . PASS END=108487900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 108487901 . A G, 19.36 PASS DP=5;MQ=5.40;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,1,0:0,4,0:12:57,15,0,194,15,194:233,18,0:0,0:1.9362e+01,1.2362e+01,3.1353e-01,1.9114e+02,4.7132e+01,1.9414e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,0:0,0,1,4 chr2 108487902 . G . PASS END=108487920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 108487921 . C . PASS END=108487924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 108487925 . G . PASS END=108487941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 108487942 . A . PASS END=108487942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,133:0,1,133:5,0 chr2 108487943 . G . PASS END=108487946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 108487947 . A T, 0.01 DRAGENSnpHardQUAL DP=5;MQ=5.40;MQRankSum=-0.358;ReadPosRankSum=0.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:3,2,0:0.400,0.000:5:1,0,0:2,2,0:29:5,0,7,14,78,92:15,0,115:4,0:5.6639e-03,2.9421e+01,3.9421e+01,4.3345e+01,1.4260e+02,1.2476e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,0,2,0:1,2,0,2 chr2 108487948 . A . PASS END=108487952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 108487953 . G . PASS END=108487953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 108487954 . A . PASS END=108487955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr2 108487956 . G . LowGQ END=108487956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,147:21,0,168:4,0 chr2 108487957 . A . PASS END=108487965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,205:6,0 chr2 108487966 . A G, 29.20 PASS DP=6;MQ=7.55;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,6,0:1.000,0.000:6:0,1,0:0,5,0:15:67,18,0,232,18,232:249,21,0:0,0:2.9197e+01,1.5197e+01,1.3871e-01,2.2938e+02,4.9967e+01,2.3238e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,0:0,0,1,5 chr2 108487967 . G . LowGQ END=108487967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,161:12,0,173:4,0 chr2 108487968 . C . PASS END=108487969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 108487970 . T . PASS END=108487970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 108487971 . C . PASS END=108487971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr2 108487972 . T . PASS END=108487972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 108487973 . G . PASS END=108487974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 108487975 . T . PASS END=108487975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 108487976 . A . PASS END=108487977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 108487978 . A . PASS END=108487980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,270:0,13,255:6,0 chr2 108487981 . T . LowGQ END=108487981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:6,0 chr2 108487982 . A . PASS END=108487990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:8:0,10,225:0,10,255:6,0 chr2 108487991 . A . PASS END=108487993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:4:7:0,4,185:0,4,185:5,0 chr2 108487994 . T . PASS END=108487996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr2 108487997 . C . PASS END=108488003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 108488004 . C . PASS END=108488005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 108488006 . T . PASS END=108488040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:13,0 chr2 108488041 . G . PASS END=108488050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,596:0,48,255:19,0 chr2 108488051 . A . PASS END=108488053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 108488054 . G . PASS END=108488054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 108488055 . A . PASS END=108488091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:24,0 chr2 108488092 . A . PASS END=108488092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,735:0,39,255:22,0 chr2 108488093 . T . PASS END=108488094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 108488095 . A . PASS END=108488095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 108488096 . T . PASS END=108488114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,925:0,75,255:25,0 chr2 108488115 . G . PASS END=108488115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 108488116 . A . PASS END=108488119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:25,0 chr2 108488120 . A . PASS END=108488704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:81:29:0,81,1117:0,87,255:40,0 chr2 108488705 . G . PASS END=108488741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,114,1710:0,152,255:40,0 chr2 108488742 . G T, 211.42 PASS DP=60;MQ=23.09;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,28,0:0,32,0:177:249,180,0,2196,180,2196:255,180,0:0,0:2.1142e+02,1.7709e+02,0.0000e+00,4.5000e+02,2.1186e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,40:0,0,38,22 chr2 108488743 . T . PASS END=108488779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:38:0,89,1316:0,89,255:40,0 chr2 108488780 . A . PASS END=108488805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1178:0,83,255:36,0 chr2 108488806 . A . PASS END=108488814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,80,255:26,0 chr2 108488815 . A . PASS END=108488817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:29:0,54,810:0,80,255:18,0 chr2 108488818 . T . PASS END=108488842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,695:0,63,255:21,0 chr2 108488843 . T . PASS END=108488845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr2 108488846 . T . PASS END=108488851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 108488852 . A . PASS END=108488852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 108488853 . A . PASS END=108488864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 108488865 . G . PASS END=108488865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 108488866 . A . PASS END=108488873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr2 108488874 . T . PASS END=108488874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 108488875 . C . PASS END=108488881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 108488882 . A . PASS END=108488883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 108488884 . C . PASS END=108488895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 108488896 . C . PASS END=108488910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:21:0,51,765:0,52,255:21,0 chr2 108488911 . C . PASS END=108488913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 108488914 . G . PASS END=108488916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 108488917 . A . PASS END=108488932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr2 108488933 . A . PASS END=108488933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 108488934 . A . PASS END=108488941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 108488942 . A . PASS END=108488942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 108488943 . G . PASS END=108488956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr2 108488957 . A . PASS END=108488958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,56,255:18,0 chr2 108488959 . C . PASS END=108488967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,62,255:21,0 chr2 108488968 . A . PASS END=108488968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr2 108488969 . G . PASS END=108488974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 108488975 . A . PASS END=108488977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:25,0 chr2 108488978 . T . PASS END=108488981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,864:0,61,255:26,0 chr2 108488982 . A . PASS END=108488994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:29,0 chr2 108488995 . A . PASS END=108488995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 108488996 . T . PASS END=108489018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1143:0,90,255:35,0 chr2 108489019 . T . PASS END=108489019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:34,0 chr2 108489020 . T . PASS END=108489326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:32:0,81,1181:0,83,255:40,0 chr2 108489327 . G . PASS END=108489341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:25:0,60,900:0,62,255:26,0 chr2 108489342 . G . PASS END=108489351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr2 108489352 . C . PASS END=108489352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:14,0 chr2 108489353 . A . PASS END=108489361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,630:0,40,255:15,0 chr2 108489362 . C . PASS END=108489367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr2 108489368 . T . PASS END=108489368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 108489369 . A . PASS END=108489384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr2 108490262 . G . PASS END=108490337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,98,255:40,0 chr2 108490338 . A . PASS END=108490339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 108496424 . A . PASS END=108496434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,120,1800:0,132,255:40,0 chr2 108496435 . T A, 213.00 PASS DP=70;MQ=69.27;MQRankSum=1.683;ReadPosRankSum=0.049;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,69,0:0.986,0.000:70:0,36,0:1,33,0:167:251,170,0,2450,206,2486:255,171,0:1,0:2.1300e+02,1.6705e+02,0.0000e+00,4.5000e+02,2.3757e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,40,29:0,1,39,30 chr2 108496436 . G . PASS END=108496472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,200,255:40,0 chr2 108496473 . G . PASS END=108496563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:47:0,114,1710:0,131,255:40,0 chr2 108497231 . T . PASS END=108497237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 108497238 . G . PASS END=108497255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,679:0,60,255:22,0 chr2 108497256 . C . PASS END=108497256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 108497257 . A . PASS END=108497264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 108497265 . T A, 64.98 PASS DP=22;MQ=18.86;MQRankSum=-1.103;ReadPosRankSum=0.630;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,21,0:0.955,0.000:22:1,7,0:0,14,0:28:103,31,0,677,67,713:255,27,0:1,0:6.4983e+01,2.7983e+01,6.9176e-03,4.5000e+02,9.8495e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,11,10:1,0,15,6 chr2 108497266 . T . PASS END=108497278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:22,0 chr2 108499128 . C . PASS END=108499329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,120,1800:0,147,255:40,0 chr2 108507177 . G . PASS END=108507187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:71:0,120,1800:0,213,255:40,0 chr2 108604612 . A . PASS END=108604790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:29:0,83,1035:0,83,255:40,0 chr2 108604795 . T . PASS END=108604795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 108608562 . C . PASS END=108608675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:36:0,98,1313:0,98,255:40,0 chr2 108608786 . A . PASS END=108608825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:84:0,120,1800:0,221,255:40,0 chr2 108609428 . G . PASS END=108609434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,682:0,54,255:19,0 chr2 108609435 . G . PASS END=108609436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 108609437 . T . PASS END=108609447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,637:0,43,255:20,0 chr2 108609448 . C . PASS END=108609461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,799:0,64,255:26,0 chr2 108609462 . G . PASS END=108609583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1180:0,83,255:40,0 chr2 108614294 . G . PASS END=108614294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 108614295 . A . PASS END=108614305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,922:0,72,255:26,0 chr2 108614306 . G . PASS END=108614316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1064:0,84,255:29,0 chr2 108614317 . G . PASS END=108614317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 108614318 . A . PASS END=108614344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1172:0,92,255:35,0 chr2 108614345 . T . PASS END=108614345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1185:0,72,255:35,0 chr2 108614346 . C . PASS END=108614408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,90,255:39,0 chr2 108614409 . T . PASS END=108614409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:28,0 chr2 108614410 . G . PASS END=108614419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 108614420 . T . PASS END=108614421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 108614422 . T . PASS END=108614432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 108614433 . T . PASS END=108614442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 108618353 . T . PASS END=108618456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:34:0,87,1269:0,96,255:40,0 chr2 108618457 . A . PASS END=108618457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:27,0 chr2 108618458 . T . PASS END=108618472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,86,255:28,0 chr2 108618473 . T . PASS END=108618473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 108618474 . G . PASS END=108618485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 108618486 . T . PASS END=108618496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,67,255:26,0 chr2 108622505 . A . PASS END=108622658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1260:0,93,255:40,0 chr2 108624921 . A . PASS END=108625138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:34:0,87,1302:0,89,255:40,0 chr2 108625144 . A . PASS END=108625144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 108626688 . G . PASS END=108627287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:36:0,81,1338:0,81,255:40,0 chr2 108627288 . G . PASS END=108627305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,990:0,75,255:25,0 chr2 108627306 . A . PASS END=108627306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 108627307 . A . PASS END=108627307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 108627308 . T . PASS END=108627308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,833:0,45,255:22,0 chr2 108627309 . T . PASS END=108627317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 108863516 . A . PASS END=108863822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:49:0,109,1800:0,109,255:40,0 chr2 108868821 . G . PASS END=108868949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:60:0,120,1800:0,180,255:40,0 chr2 108869801 . A . PASS END=108869895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,99,1340:0,107,255:40,0 chr2 108869896 . A . PASS END=108869898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:63:39:0,63,945:0,117,255:21,0 chr2 108872028 . A . PASS END=108872154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:40:0,92,1397:0,92,255:40,0 chr2 108875190 . T . PASS END=108875284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,110,1504:0,110,255:40,0 chr2 108875422 . A . PASS END=108875572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:87:38:0,87,1305:0,90,255:40,0 chr2 108875573 . A . PASS END=108875578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:33:0,75,1125:0,99,255:26,0 chr2 108875579 . C . PASS END=108875580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:27,0 chr2 108875581 . A . PASS END=108875581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:26,0 chr2 108875582 . T . PASS END=108875583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 108875584 . T . PASS END=108875602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,889:0,67,255:27,0 chr2 108877024 . G . PASS END=108877136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:42:0,105,1544:0,105,255:40,0 chr2 108881281 . G . PASS END=108881461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:45:0,108,1538:0,108,255:40,2 chr2 108881695 . G . PASS END=108881807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,140,255:40,0 chr2 108910124 . A . PASS END=108910124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 108910125 . T . PASS END=108910269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1103:0,80,255:40,0 chr2 108910270 . A . PASS END=108910274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:29:0,63,945:0,87,255:21,0 chr2 108910679 . C . PASS END=108910793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:32:0,81,1215:0,91,255:40,0 chr2 108910794 . G . PASS END=108910796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:25,0 chr2 108910797 . A . PASS END=108910800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:28:0,57,855:0,68,255:19,0 chr2 108910801 . C . PASS END=108910804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:20,0 chr2 108910805 . C . PASS END=108910810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:19,0 chr2 108917252 . T . PASS END=108917391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:47:0,120,1800:0,134,255:40,0 chr2 108921030 . T . PASS END=108921156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:55:0,120,1800:0,147,255:40,0 chr2 108921628 . T . PASS END=108921722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,125,255:40,0 chr2 108921871 . G . PASS END=108922051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:48:0,102,1530:0,128,255:40,0 chr2 108924808 . G . PASS END=108924920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:30:0,88,1080:0,88,255:40,0 chr2 108994794 . A . PASS END=108994807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,106,1324:0,106,255:40,0 chr2 108994808 . C G, 194.47 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,23,0:0,26,0:144:232,147,0,1883,147,1883:255,147,0:0,0:1.9447e+02,1.4447e+02,0.0000e+00,4.5000e+02,1.7924e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,9:0,0,24,25 chr2 108994809 . A . PASS END=108994845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,109,1601:0,109,255:40,0 chr2 108994846 . G . PASS END=108994867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:49:0,83,1386:0,83,255:40,0 chr2 108994868 . T . PASS END=108994868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:35:49:0,35,1243:0,35,255:40,0 chr2 108994869 . C . PASS END=108994958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1191:0,90,255:40,0 chr2 108994959 . G . PASS END=108994959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:29,0 chr2 108994960 . C . PASS END=108994962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 108998218 . G . PASS END=108998343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:57:0,120,1800:0,144,255:40,0 chr2 108998841 . G . PASS END=108998938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,103,1358:0,103,255:40,0 chr2 108999549 . A . PASS END=108999549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1217:0,64,255:35,0 chr2 108999550 . T . PASS END=108999553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:38:0,93,1435:0,93,255:40,0 chr2 108999554 . C . PASS END=108999675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:42:0,90,1418:0,90,255:40,0 chr2 108999872 . T . PASS END=108999966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:42:0,90,1350:0,126,255:40,0 chr2 109002648 . A . PASS END=109002797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:39:0,84,1260:0,113,255:40,0 chr2 109002798 . G . PASS END=109002827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:22:0,63,945:0,66,255:26,0 chr2 109002828 . G . PASS END=109002828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 109003776 . G . PASS END=109003888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:92:49:0,92,1698:0,92,255:40,0 chr2 109065731 . A . PASS END=109065731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:19,0 chr2 109065732 . T . PASS END=109065733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 109065734 . G . PASS END=109065740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 109065741 . C . PASS END=109065741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 109065742 . T . PASS END=109065745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,765:0,50,255:18,0 chr2 109066089 . G . PASS END=109066145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,119,1659:0,119,255:40,0 chr2 109067484 . C . PASS END=109067568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,105,1575:0,117,255:40,0 chr2 109068855 . A . PASS END=109068922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,133,255:40,0 chr2 109085436 . G . PASS END=109085540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:51:0,120,1800:0,145,255:40,0 chr2 109086107 . G . PASS END=109088572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:83:33:0,83,1341:0,83,255:40,0 chr2 109089283 . G . PASS END=109089366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:64:0,120,1800:0,151,255:40,0 chr2 109089367 . T . PASS END=109089393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,139,255:40,0 chr2 109091245 . G . PASS END=109091309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:86:45:0,86,1517:0,86,255:40,0 chr2 109091991 . A . PASS END=109092091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,119,1800:0,119,255:40,0 chr2 109092208 . A . PASS END=109092234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:43:0,83,1483:0,83,255:40,0 chr2 109092235 . T . PASS END=109092235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:32:44:0,32,1209:0,32,255:36,0 chr2 109092236 . C . PASS END=109092306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1258:0,91,255:40,0 chr2 109098153 . A . PASS END=109098272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:39:0,103,1291:0,103,255:40,0 chr2 109098743 . T . PASS END=109098907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,105,1651:0,105,255:40,0 chr2 109099518 . G . PASS END=109099534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:60:0,120,1800:0,180,255:40,0 chr2 109099535 . A . PASS END=109099571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:84:0,120,1800:0,226,255:40,0 chr2 109099572 . C G, 300.05 PASS DP=85;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,85,0:1.000,0.000:85:0,52,0:0,33,0:250:338,253,0,3096,253,3096:255,255,0:0,0:3.0005e+02,2.5005e+02,0.0000e+00,4.5000e+02,2.8482e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,52,33:0,0,37,48 chr2 109099573 . A . PASS END=109099609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:84:0,120,1800:0,202,255:40,0 chr2 109099610 . G . PASS END=109099622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:72:0,120,1800:0,168,255:40,0 chr2 109100605 . G . PASS END=109100767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:64:0,120,1800:0,157,255:40,0 chr2 109102092 . C . PASS END=109102192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:52:0,120,1800:0,140,255:40,2 chr2 109102287 . G . PASS END=109102364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:40:0,110,1543:0,110,255:40,0 chr2 109102891 . T . PASS END=109102902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:80:0,120,1800:0,209,255:40,0 chr2 109102967 . A . PASS END=109103104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:93:38:0,93,1395:0,110,255:40,0 chr2 109104155 . G . PASS END=109104276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:36:0,92,1272:0,92,255:40,0 chr2 109106294 . G . PASS END=109106470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,108,1482:0,109,255:40,0 chr2 109109029 . A . PASS END=109109029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 109109030 . T . PASS END=109109031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:38:18:0,38,585:0,38,255:14,0 chr2 109109032 . G . PASS END=109109032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 109109033 . T . PASS END=109109033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 109109034 . G . PASS END=109109041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:25,0 chr2 109109042 . C . PASS END=109109238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:28:0,81,1057:0,82,255:40,0 chr2 109109239 . C . PASS END=109109244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:25,0 chr2 109109245 . A . PASS END=109109246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:45:31:0,45,675:0,93,255:18,0 chr2 109111747 . G . PASS END=109111941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,126,255:40,0 chr2 109113426 . A . PASS END=109113565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:48:0,120,1800:0,144,255:40,0 chr2 109116009 . C . PASS END=109116210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:121,0:121:99:62:0,120,1800:0,139,255:40,0 chr2 109124016 . G . PASS END=109124029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1313:0,97,255:37,0 chr2 109124030 . G . PASS END=109124030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:36,0 chr2 109124031 . C . PASS END=109124033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1417:0,104,255:38,0 chr2 109124034 . C . PASS END=109124057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:38:0,81,1215:0,101,255:40,0 chr2 109124058 . A . PASS END=109124071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:30:0,63,945:0,73,255:26,0 chr2 109124072 . T . PASS END=109124072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:20,0 chr2 109124073 . C . PASS END=109124074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,900:0,70,255:19,0 chr2 109124075 . G . PASS END=109124086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,676:0,44,255:18,0 chr2 109150206 . A . PASS END=109150264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1357:0,84,255:40,0 chr2 109151019 . A . PASS END=109151033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 109151034 . G . PASS END=109151040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 109151041 . T . PASS END=109151046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:14:0,21,315:0,42,255:9,0 chr2 109151047 . A . PASS END=109151050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:12:12:0,12,180:0,36,255:5,0 chr2 109196835 . A . PASS END=109196835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 109196836 . T . PASS END=109196836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1386:0,79,255:37,0 chr2 109196837 . G . PASS END=109196844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,113,1529:0,113,255:39,0 chr2 109196845 . A . PASS END=109196845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr2 109196846 . A . PASS END=109196851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1349:0,84,255:39,0 chr2 109223704 . A . PASS END=109223711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:62:0,120,1800:0,170,255:40,0 chr2 109237811 . A . PASS END=109237917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:48:0,120,1800:0,128,255:40,0 chr2 109271531 . A . PASS END=109271545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,681:0,66,255:22,0 chr2 109271546 . C . PASS END=109271546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 109271547 . G . PASS END=109271549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 109271550 . C . PASS END=109271550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 109271551 . G . PASS END=109271551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 109271552 . C . PASS END=109271559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,56,255:20,0 chr2 109271560 . C . PASS END=109271572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 109271573 . A . PASS END=109271583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,674:0,44,255:19,0 chr2 109271584 . C . PASS END=109271590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 109271591 . G . PASS END=109271593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 109271594 . G . PASS END=109271629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:12,0 chr2 109271630 . G . PASS END=109271630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 109271631 . A . PASS END=109271636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 109271637 . G . PASS END=109271639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 109271640 . C . PASS END=109271640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 109271641 . T . PASS END=109271642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 109271643 . T . LowGQ END=109271643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:8,0 chr2 109271644 . T . PASS END=109271672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 109271673 . T . PASS END=109271712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 109276061 . C . PASS END=109276067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:25,0 chr2 109276068 . G . PASS END=109276220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1087:0,90,255:40,0 chr2 109278685 . G . PASS END=109278696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 109287215 . T . PASS END=109287303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:64:0,120,1800:0,185,255:40,0 chr2 109288781 . G . PASS END=109288784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 109288785 . A . PASS END=109288786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr2 109288787 . T . PASS END=109288798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:8,0 chr2 109288799 . G . PASS END=109288799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 109288800 . A . PASS END=109288810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr2 109288811 . C . PASS END=109288811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 109288812 . C . PASS END=109288817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,341:0,27,255:9,0 chr2 109288818 . T . PASS END=109288818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 109288819 . A . LowGQ END=109288819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:9,0 chr2 109288820 . A . PASS END=109288820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 109288821 . C . PASS END=109288827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 109288828 . C . PASS END=109288828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 109288829 . A . PASS END=109288834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 109288835 . A . PASS END=109288880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr2 109288881 . G . PASS END=109288899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:11:6:0,11,210:0,11,210:8,0 chr2 109288900 . A . PASS END=109288900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 109288901 . G . PASS END=109288901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 109289336 . A . PASS END=109289386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr2 109289387 . A . PASS END=109289397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr2 109289398 . A . PASS END=109289409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:6,0 chr2 109289410 . C . PASS END=109289410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr2 109289411 . T . PASS END=109289411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 109289412 . A . PASS END=109289467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 109289468 . C . PASS END=109289469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 109289470 . A . PASS END=109289470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr2 109289471 . C . PASS END=109289481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 109289482 . G . PASS END=109289482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,339:0,3,255:9,0 chr2 109289483 . C . PASS END=109289483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr2 109289484 . G . PASS END=109289485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 109292334 . G . PASS END=109292446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,98,255:40,0 chr2 109292447 . G . PASS END=109292466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,74,255:25,0 chr2 109292467 . A . PASS END=109292470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr2 109292471 . A . PASS END=109292471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:18,0 chr2 109292472 . G . PASS END=109292479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 109292480 . T . PASS END=109292484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 109293062 . C . PASS END=109293154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,120,1800:0,171,255:40,0 chr2 109294435 . C . PASS END=109294483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,147,255:40,0 chr2 109297151 . T . PASS END=109297226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:92:34:0,92,1189:0,92,255:40,0 chr2 109297425 . G . PASS END=109297430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr2 109297431 . G . PASS END=109297431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 109297432 . T . PASS END=109297437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,979:0,87,255:30,0 chr2 109297438 . G . PASS END=109297438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 109297439 . A . PASS END=109297572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:90:31:0,90,1089:0,93,255:40,0 chr2 109300341 . G . PASS END=109300343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,101,1390:0,101,255:38,0 chr2 109300344 . T . PASS END=109300344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1296:0,62,255:37,0 chr2 109300345 . A . PASS END=109300345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1203:0,45,255:36,0 chr2 109300346 . A . PASS END=109300455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:45:0,120,1800:0,123,255:40,0 chr2 109336063 . A . PASS END=109336081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 109336082 . A . PASS END=109336082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 109336083 . C . PASS END=109336109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,909:0,75,255:25,0 chr2 109336110 . G . PASS END=109336115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr2 109336116 . C . PASS END=109336116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr2 109336117 . A . PASS END=109336134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,714:0,57,255:19,0 chr2 109345588 . A . PASS END=109345635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:67:0,120,1800:0,187,255:40,0 chr2 109345636 . G . PASS END=109345655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:82:0,120,1800:0,236,255:40,0 chr2 109347230 . A . PASS END=109347341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:90:43:0,90,1424:0,90,255:40,0 chr2 109347778 . C . PASS END=109347930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:47:0,101,1800:0,101,255:40,0 chr2 109351988 . G . PASS END=109352218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:90:40:0,90,1350:0,116,255:40,0 chr2 109352560 . G . PASS END=109352705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:53:0,120,1800:0,146,255:40,0 chr2 109356939 . T . PASS END=109356939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 109356945 . T . PASS END=109357137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:86:44:0,86,1450:0,86,255:40,0 chr2 109363167 . G . PASS END=109363178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr2 109363179 . A . PASS END=109363179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1045:0,46,255:27,0 chr2 109363180 . A . PASS END=109363183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 109363184 . T . PASS END=109363185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1103:0,77,255:31,0 chr2 109363186 . A . PASS END=109363187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:31,0 chr2 109363188 . T . PASS END=109363188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr2 109363189 . T . PASS END=109363199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 109363200 . G . PASS END=109363200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:29,0 chr2 109363201 . A . PASS END=109363223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1089:0,80,255:31,0 chr2 109363224 . A . PASS END=109363230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,77,255:26,0 chr2 109363231 . C . PASS END=109363254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,44,255:19,0 chr2 109363257 . A . PASS END=109363257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 109365376 . G . PASS END=109365585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:56:0,120,1800:0,152,255:40,0 chr2 109367720 . G . PASS END=109367901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:44:0,120,1800:0,128,255:40,0 chr2 109367984 . G . PASS END=109368137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:46:0,88,1332:0,88,255:40,0 chr2 109368138 . C . PASS END=109368138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:74:54:0,74,1759:0,74,255:40,0 chr2 109368139 . T . PASS END=109368159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:44:0,99,1422:0,99,255:40,0 chr2 109368317 . T . PASS END=109368317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:80:0,120,1800:0,223,255:40,0 chr2 109368327 . A . PASS END=109368450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:54:0,120,1800:0,162,255:40,0 chr2 109369454 . G . PASS END=109369454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 109369455 . G . PASS END=109369455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 109369456 . C . PASS END=109369459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 109369460 . G . PASS END=109369460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 109369461 . G . PASS END=109369461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 109369462 . T . PASS END=109369462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1057:0,62,255:29,0 chr2 109369463 . C . PASS END=109369464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 109369465 . T . PASS END=109369466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 109369467 . A . PASS END=109369467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 109369468 . T . PASS END=109369473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1080:0,62,255:29,0 chr2 109369474 . T . PASS END=109369474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 109369475 . T . PASS END=109369478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1124:0,77,255:26,0 chr2 109369479 . A . PASS END=109369494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1242:0,90,255:40,0 chr2 109369495 . A . PASS END=109369495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1410:0,76,255:39,0 chr2 109369496 . G . PASS END=109369615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:41:0,108,1458:0,108,255:40,0 chr2 109369876 . G . PASS END=109369876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 109369881 . G . PASS END=109370019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:60:0,120,1800:0,149,255:40,0 chr2 109370272 . T . PASS END=109370272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,231,255:40,0 chr2 109370281 . A . PASS END=109370427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:65:0,120,1800:0,153,255:40,0 chr2 109371361 . T . PASS END=109371540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:48:0,120,1800:0,121,255:40,0 chr2 109371629 . T . PASS END=109371629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 109371632 . T . PASS END=109371715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,99,1485:0,120,255:40,0 chr2 109374869 . A . PASS END=109375004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:80:32:0,80,1093:0,80,255:40,0 chr2 109376401 . A . PASS END=109376513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:72:0,120,1800:0,178,255:40,1 chr2 109378554 . T . PASS END=109378554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:85:0,120,1800:0,239,255:40,0 chr2 109378557 . T . PASS END=109378651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:96:47:0,96,1440:0,126,255:40,0 chr2 109379693 . G . PASS END=109379713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:20:0,60,731:0,60,255:26,0 chr2 109379714 . A . PASS END=109379714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr2 109379715 . G . PASS END=109379720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr2 109379721 . C . PASS END=109379721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 109379722 . A . PASS END=109379795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1125:0,80,255:40,0 chr2 109379796 . T . PASS END=109379796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1258:0,70,255:34,0 chr2 109379797 . C . PASS END=109380198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:34:0,80,1232:0,80,255:40,0 chr2 109380199 . T . PASS END=109380199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1342:0,78,255:37,0 chr2 109380200 . C . PASS END=109380200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 109380201 . T . PASS END=109380201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr2 109380202 . C . PASS END=109381083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:35:0,87,1218:0,87,255:40,2 chr2 109381084 . A . PASS END=109381084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:33,0 chr2 109381085 . A . PASS END=109381085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 109381086 . A . PASS END=109381087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1258:0,69,255:34,0 chr2 109381088 . A . PASS END=109381180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1254:0,81,255:40,0 chr2 109381181 . A . PASS END=109381181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1310:0,67,255:32,0 chr2 109381182 . C . PASS END=109381192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:37:0,95,1349:0,95,255:40,0 chr2 109381193 . A . PASS END=109381193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1253:0,54,255:35,0 chr2 109381194 . G . PASS END=109381213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1228:0,84,255:40,0 chr2 109381214 . C . PASS END=109381214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1317:0,73,255:33,0 chr2 109381215 . G . PASS END=109381896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:88:34:0,88,1227:0,88,255:40,0 chr2 109381897 . A . PASS END=109381897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1044:0,71,255:33,0 chr2 109381898 . C . PASS END=109381903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1174:0,88,255:35,0 chr2 109381904 . C . PASS END=109381904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr2 109381905 . A . PASS END=109381926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1246:0,94,255:37,0 chr2 109381927 . A . PASS END=109381927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1311:0,62,255:34,0 chr2 109381928 . C . PASS END=109382021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1073:0,82,255:38,0 chr2 109382022 . T . PASS END=109382024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 109382025 . G . PASS END=109382046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1156:0,85,255:33,0 chr2 109382047 . A . PASS END=109382047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:29,0 chr2 109382048 . T . PASS END=109382056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:32:0,88,1227:0,88,255:31,0 chr2 109382057 . T . PASS END=109382057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 109382058 . G . PASS END=109382059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 109382060 . C . PASS END=109382061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:27,0 chr2 109382062 . G . PASS END=109382063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 109382064 . A . PASS END=109382064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 109382065 . T . PASS END=109382065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:28,0 chr2 109382066 . C . PASS END=109382067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 109382068 . A . PASS END=109382068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 109382069 . G . PASS END=109382070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr2 109382071 . T . PASS END=109382073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr2 109382074 . A . PASS END=109382075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,940:0,60,255:29,0 chr2 109382076 . A . PASS END=109382081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 109382082 . A . PASS END=109382082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:30,0 chr2 109382083 . A . PASS END=109382083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 109382084 . A . PASS END=109382084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,882:0,40,255:29,0 chr2 109382085 . C . PASS END=109382090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1132:0,82,255:31,0 chr2 109382091 . C . PASS END=109382091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:30,0 chr2 109382092 . T . PASS END=109382092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 109382093 . G . PASS END=109382093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:30,0 chr2 109382094 . C . PASS END=109382094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:31,0 chr2 109382095 . A . PASS END=109382095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:32,0 chr2 109382096 . G . PASS END=109382099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1230:0,91,255:36,0 chr2 109382100 . C . PASS END=109382100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr2 109382101 . A . PASS END=109382101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1186:0,47,255:34,0 chr2 109382102 . A . PASS END=109382103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1236:0,94,255:37,0 chr2 109382104 . A . PASS END=109382104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1187:0,78,255:35,0 chr2 109382105 . C . PASS END=109382105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:35,0 chr2 109382106 . C . PASS END=109382106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1374:0,111,255:37,0 chr2 109382107 . T . PASS END=109382107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1178:0,61,255:34,0 chr2 109382108 . G . PASS END=109382109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1291:0,95,255:37,0 chr2 109382110 . C . PASS END=109382111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:65:38:0,65,1197:0,65,255:35,0 chr2 109382112 . C . PASS END=109382114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1519:0,94,255:40,0 chr2 109382115 . C . PASS END=109382115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1435:0,68,255:40,0 chr2 109382116 . A . PASS END=109382124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,99,1431:0,99,255:40,0 chr2 109382125 . C . PASS END=109382125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:55:45:0,55,1479:0,55,255:39,0 chr2 109382126 . A . PASS END=109382135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:45:0,95,1484:0,95,255:40,0 chr2 109382136 . A . PASS END=109382136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:70:51:0,70,1590:0,70,255:40,0 chr2 109382137 . G . PASS END=109382169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:52:0,89,1561:0,89,255:40,0 chr2 109382170 . A . PASS END=109382170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:68:57:0,68,1780:0,68,255:40,0 chr2 109382171 . G . PASS END=109382302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:94:54:0,94,1800:0,94,255:40,0 chr2 109382303 . G . PASS END=109382303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:77:57:0,77,1850:0,77,255:40,0 chr2 109382304 . C . PASS END=109382317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:98:48:0,98,1623:0,98,255:40,0 chr2 109382318 . T . PASS END=109382318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1652:0,78,255:40,0 chr2 109382319 . T . PASS END=109382325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:83:48:0,83,1667:0,83,255:40,0 chr2 109382326 . A . PASS END=109382326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:59:49:0,59,1618:0,59,255:40,0 chr2 109382327 . A . PASS END=109383473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:81:37:0,81,1215:0,82,255:40,1 chr2 109383474 . C . PASS END=109383474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr2 109383475 . T . PASS END=109383485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1257:0,89,255:34,0 chr2 109383486 . C . PASS END=109383486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 109383487 . C . PASS END=109383487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,92,255:27,0 chr2 109383488 . A . PASS END=109383488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:24,0 chr2 109383489 . A . PASS END=109383491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1260:0,81,255:28,0 chr2 109383492 . T . PASS END=109383492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1288:0,62,255:27,0 chr2 109383493 . A . PASS END=109384844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:84:31:0,84,1191:0,85,255:40,0 chr2 109385716 . G . PASS END=109385793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,105,1575:0,115,255:40,0 chr2 109388152 . T . PASS END=109388152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 109388157 . C . PASS END=109388327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:34:0,86,1210:0,86,255:40,0 chr2 109388945 . A . PASS END=109389037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:65:0,120,1800:0,171,255:40,0 chr2 109389324 . A . PASS END=109389425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:50:0,120,1800:0,134,255:40,0 chr2 109389426 . T . PASS END=109389462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,108,1620:0,120,255:40,0 chr2 109389463 . G A, 163.92 PASS DP=39;MQ=248.91;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,26,0:0,13,0:114:202,117,0,1475,117,1475:255,117,0:0,0:1.6392e+02,1.1392e+02,0.0000e+00,4.5000e+02,1.4869e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,22:0,0,20,19 chr2 109389464 . G . PASS END=109389497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:35,0 chr2 109389498 . C . PASS END=109389500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:26,0 chr2 109389501 . A . PASS END=109389502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,96,255:20,0 chr2 109392164 . T . PASS END=109392392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:56:0,120,1800:0,168,255:40,0 chr2 109393586 . G . PASS END=109393687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:92:47:0,92,1569:0,92,255:40,0 chr2 109393690 . A . PASS END=109393690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 109397725 . A . PASS END=109397885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,5:55:81:32:0,81,1141:0,81,255:40,0 chr2 109398584 . G . PASS END=109398584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,884:0,29,255:26,0 chr2 109398585 . T . PASS END=109398593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,1000:0,68,255:26,0 chr2 109398594 . A . PASS END=109398595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 109398596 . T . PASS END=109398596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:28,0 chr2 109398597 . C . PASS END=109398857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:33:0,83,1211:0,83,255:40,0 chr2 109398984 . A . PASS END=109399318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:39:0,88,1395:0,88,255:40,0 chr2 109400052 . G . PASS END=109400354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:81:36:0,81,1215:0,98,255:40,0 chr2 109400355 . T . PASS END=109400357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr2 109403236 . A . PASS END=109403257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,950:0,81,255:34,0 chr2 109403258 . C . PASS END=109403258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1157:0,72,255:31,0 chr2 109403259 . T . PASS END=109403263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:35,0 chr2 109403264 . C . PASS END=109403264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1091:0,42,255:33,0 chr2 109403265 . G . PASS END=109403278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1311:0,97,255:40,0 chr2 109403279 . A . PASS END=109403279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1324:0,60,255:40,0 chr2 109403280 . T . PASS END=109403285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1512:0,99,255:40,0 chr2 109403286 . C . PASS END=109403286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1449:0,72,255:40,0 chr2 109403287 . G . PASS END=109403287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 109403288 . A . PASS END=109403288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:16:46:0,16,1310:0,16,255:37,0 chr2 109403289 . G . PASS END=109403294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,121,255:40,0 chr2 109403295 . T . PASS END=109403295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1547:0,66,255:40,0 chr2 109403296 . C . PASS END=109403298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1574:0,119,255:40,0 chr2 109403299 . G . PASS END=109403299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1432:0,79,255:40,0 chr2 109403300 . C . PASS END=109403302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,116,1582:0,116,255:40,0 chr2 109403303 . C . PASS END=109403303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1460:0,77,255:40,0 chr2 109403304 . C . PASS END=109403309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,102,1475:0,102,255:40,0 chr2 109403310 . A . PASS END=109403310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1369:0,63,255:38,0 chr2 109403311 . G . PASS END=109403311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1544:0,105,255:40,0 chr2 109403312 . G . PASS END=109403312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1387:0,74,255:39,0 chr2 109403313 . A . PASS END=109403313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:57:47:0,57,1261:0,57,255:38,0 chr2 109403314 . T . PASS END=109403319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,105,1501:0,105,255:40,0 chr2 109403320 . A . PASS END=109403320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1263:0,70,255:37,0 chr2 109403321 . G . PASS END=109403328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:42:0,93,1352:0,93,255:40,0 chr2 109403329 . T . PASS END=109403329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1182:0,70,255:37,0 chr2 109403330 . C . PASS END=109403330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1278:0,106,255:38,0 chr2 109403331 . T . PASS END=109403331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1255:0,57,255:35,0 chr2 109403332 . C . PASS END=109403332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1161:0,73,255:37,0 chr2 109403333 . A . PASS END=109403335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1411:0,107,255:40,0 chr2 109403336 . A . PASS END=109403336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:50:41:0,50,1094:0,50,255:35,0 chr2 109403337 . G . PASS END=109403348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:39:0,89,1173:0,89,255:37,0 chr2 109403349 . T . PASS END=109403349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1041:0,66,255:32,0 chr2 109403350 . C . PASS END=109403350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:20:39:0,20,1001:0,20,255:29,0 chr2 109403351 . G . PASS END=109403359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:36:0,80,1064:0,80,255:34,0 chr2 109403360 . T . LowGQ END=109403361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,7:35:0:35:0,0,635:12,0,255:25,0 chr2 109403362 . C . PASS END=109403378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1161:0,80,255:32,0 chr2 109403379 . C . PASS END=109403389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,89,255:26,0 chr2 109404488 . T . PASS END=109404517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:66:0,120,1800:0,132,255:40,0 chr2 109404518 . T . PASS END=109404545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,166,255:40,0 chr2 109405308 . G . PASS END=109405422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:33:0,83,1343:0,83,255:40,0 chr2 109408011 . T . PASS END=109408059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:97:0,120,1800:0,255,255:40,1 chr2 109408131 . C . PASS END=109408258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:63:0,120,1800:0,179,255:40,0 chr2 109410996 . T . PASS END=109410996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 109410997 . T . PASS END=109411001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 109411002 . T . PASS END=109411002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:19,0 chr2 109411003 . G . PASS END=109411004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 109411005 . C . PASS END=109411005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 109411006 . A . PASS END=109411019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 109411020 . C . PASS END=109411087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,981:0,80,255:40,0 chr2 109411088 . A . PASS END=109411088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:37,0 chr2 109411089 . A . PASS END=109411135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1163:0,80,255:39,0 chr2 109411136 . C . PASS END=109411164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr2 109411165 . T . PASS END=109411165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 109411166 . C . PASS END=109411166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 109411167 . T . PASS END=109411177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,63,255:19,0 chr2 109414884 . T . PASS END=109415042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:59:0,120,1800:0,150,255:40,0 chr2 109421345 . C . PASS END=109421366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,120,1800:0,137,255:40,0 chr2 109421367 . A . PASS END=109421407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,146,255:40,0 chr2 109421408 . A . PASS END=109421408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,8:66:65:66:0,65,1830:0,65,255:40,0 chr2 109421409 . G . PASS END=109421464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,102,1474:0,107,255:40,0 chr2 109429087 . T . PASS END=109429108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:76:0,120,1800:0,195,255:40,0 chr2 109429109 . A . PASS END=109429145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,191,255:40,0 chr2 109429146 . T A, 274.36 PASS DP=76;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,76,0:1.000,0.000:76:0,48,0:0,28,0:224:312,227,0,2859,227,2859:255,231,0:0,0:2.7436e+02,2.2436e+02,0.0000e+00,4.5000e+02,2.5913e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,43:0,0,39,37 chr2 109429147 . C . PASS END=109429164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,216,255:40,0 chr2 109429276 . A . PASS END=109429383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,159,255:40,0 chr2 109432397 . G . PASS END=109432418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:39:0,89,1368:0,89,255:40,0 chr2 109432419 . A . PASS END=109432419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1429:0,71,255:38,0 chr2 109432420 . T . PASS END=109432550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:98:41:0,98,1485:0,98,255:40,0 chr2 109432551 . A . PASS END=109432552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr2 109432553 . T . PASS END=109432553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr2 109432554 . G . PASS END=109432561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:36:0,69,1125:0,69,255:26,0 chr2 109455641 . C . PASS END=109455757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:35:0,102,1396:0,105,255:40,0 chr2 109463194 . C . PASS END=109463386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:38:0,84,1260:0,99,255:40,0 chr2 109473250 . C . PASS END=109473250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1390:0,111,255:37,0 chr2 109473251 . T . PASS END=109473251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:36,0 chr2 109473252 . G . PASS END=109473426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:35:0,90,1384:0,90,255:40,0 chr2 109489907 . A . PASS END=109490045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:34:0,89,1278:0,89,255:40,0 chr2 109492544 . G . PASS END=109492709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:45:0,87,1305:0,132,255:40,0 chr2 109499127 . G . PASS END=109499203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,100,1344:0,100,255:40,0 chr2 109510932 . T . PASS END=109510932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,163,255:40,0 chr2 109510987 . A . PASS END=109510987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 109511174 . C . PASS END=109511174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 109511347 . C . PASS END=109511347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 109511565 . C . PASS END=109511565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 109511602 . C . PASS END=109511602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1323:0,78,255:37,0 chr2 109511653 . C . PASS END=109511653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 109511660 . C . PASS END=109511660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 109511716 . G . PASS END=109511716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 109511800 . G . PASS END=109511800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 109511828 . G . PASS END=109511828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 109511928 . C . PASS END=109511928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 109512044 . G . PASS END=109512044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 109512065 . C . PASS END=109512065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 109512137 . T . PASS END=109512137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 109512164 . G . PASS END=109512164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1227:0,99,255:33,0 chr2 109512182 . G . PASS END=109512182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr2 109512255 . C . PASS END=109512255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 109512387 . T . PASS END=109512387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1311:0,105,255:35,0 chr2 109512496 . T . PASS END=109512496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 109512572 . T . PASS END=109512572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 109512649 . A . PASS END=109512649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 109512724 . A . PASS END=109512724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 109512738 . G . PASS END=109512738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,111,1665:0,113,255:36,0 chr2 109512761 . A . PASS END=109512761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 109512817 . G . PASS END=109512817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 109512864 . G . PASS END=109512864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 109512877 . C . PASS END=109512878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:48:0,120,1800:0,137,255:40,0 chr2 109512916 . A . PASS END=109512916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 109512961 . C . PASS END=109512961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 109513121 . A . PASS END=109513121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 109513172 . G . PASS END=109513172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 109513175 . C . PASS END=109513175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 109513363 . T . PASS END=109513541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1174:0,84,255:40,0 chr2 109513542 . C . PASS END=109513542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1191:0,72,255:32,0 chr2 109513543 . C . PASS END=109513546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr2 109513547 . A . PASS END=109513547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:51:33:0,51,960:0,51,255:30,0 chr2 109513548 . T . PASS END=109513553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1073:0,82,255:30,0 chr2 109513554 . C . PASS END=109513569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:27:0,65,961:0,65,255:25,0 chr2 109513570 . G . PASS END=109513570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:21,0 chr2 109513571 . C . PASS END=109513571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 109513572 . T . PASS END=109513572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:20,0 chr2 109513573 . C . PASS END=109513573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 109513574 . T . PASS END=109513574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:21,0 chr2 109513575 . C . PASS END=109513575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 109513576 . G . PASS END=109513584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,737:0,49,255:19,0 chr2 109513585 . G . PASS END=109513589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 109513590 . A . PASS END=109513590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 109513591 . C . PASS END=109513591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 109513592 . G . PASS END=109513594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:18,0 chr2 109513595 . T . PASS END=109513600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 109513601 . A . PASS END=109513601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 109513602 . C . PASS END=109513602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 109513603 . A . PASS END=109513603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 109513604 . G . PASS END=109513612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,715:0,63,255:22,0 chr2 109513613 . G . PASS END=109513616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,770:0,52,255:20,0 chr2 109513617 . T . PASS END=109513617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 109513618 . G . PASS END=109513633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr2 109513634 . A . PASS END=109513643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:14:0,36,540:0,40,255:13,0 chr2 109513644 . T . PASS END=109513644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr2 109513645 . C . PASS END=109513653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 109513654 . G A, 88.21 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,7,0:0,7,0:38:126,41,0,483,41,483:255,42,0:0,0:8.8214e+01,3.8214e+01,6.5548e-04,4.5000e+02,7.2984e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,13:0,0,8,6 chr2 109513655 . C . PASS END=109513680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 109513681 . A . PASS END=109513683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 109513684 . A . LowGQ END=109513684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,266:6,0,255:7,0 chr2 109513685 . C . PASS END=109513685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 109522763 . C . PASS END=109522824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,102,1499:0,102,255:40,0 chr2 109524316 . C . PASS END=109524337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr2 109524338 . G . PASS END=109524338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr2 109524339 . C . PASS END=109524351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:26,0 chr2 109524352 . G . PASS END=109524356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 109524357 . G . PASS END=109524357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 109524358 . G . PASS END=109524367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 109524368 . G . PASS END=109524372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 109524373 . C . PASS END=109524381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 109524382 . C . PASS END=109524382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 109524383 . T . PASS END=109524400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,956:0,81,255:30,0 chr2 109524401 . T . PASS END=109524423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr2 109524424 . G . PASS END=109524424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 109524425 . T . PASS END=109524428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1001:0,73,255:26,0 chr2 109524429 . C . PASS END=109524429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:24,0 chr2 109524430 . G . PASS END=109524436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 109524437 . C . PASS END=109524442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 109524443 . A . PASS END=109524448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 109524449 . T . PASS END=109524449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,801:0,48,255:23,0 chr2 109524450 . C . PASS END=109524453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 109524454 . C . PASS END=109524454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:21,0 chr2 109524455 . T . PASS END=109524464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:23,0 chr2 109524465 . C . PASS END=109524465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 109524466 . A . PASS END=109524475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:23,0 chr2 109526912 . A . PASS END=109526912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 109526915 . C . PASS END=109526931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,146,255:40,0 chr2 109526932 . C . PASS END=109526968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,169,255:40,0 chr2 109526969 . G A, 232.67 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,35,0:0,27,0:183:270,186,0,2329,186,2329:255,186,0:0,0:2.3267e+02,1.8267e+02,0.0000e+00,4.5000e+02,2.1744e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,28:0,0,39,23 chr2 109526970 . G . PASS END=109526988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:60:0,120,1800:0,167,255:40,0 chr2 109527050 . A . PASS END=109527050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:45:0,93,1395:0,135,255:31,0 chr2 109527232 . C . PASS END=109527262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1252:0,84,255:38,0 chr2 109527263 . C . PASS END=109527263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr2 109527264 . A . PASS END=109527335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,85,255:39,0 chr2 109527336 . G . PASS END=109527337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 109527338 . C . PASS END=109527341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:27,0 chr2 109527342 . C . PASS END=109527343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 109527344 . G . PASS END=109527345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 109527346 . C . PASS END=109527364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,986:0,71,255:26,0 chr2 109527365 . G . PASS END=109527372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 109527373 . A G, 139.37 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:89:177,92,0,1122,92,1122:255,93,0:0,0:1.3937e+02,8.9374e+01,0.0000e+00,4.5000e+02,1.2414e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,18:0,0,15,16 chr2 109527374 . G . PASS END=109527382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr2 109527383 . C . PASS END=109527387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,80,255:26,0 chr2 109527388 . C . PASS END=109527409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 109527410 . A . PASS END=109527410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 109527411 . G . PASS END=109527418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1119:0,90,255:31,0 chr2 109527419 . T . PASS END=109527419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 109527420 . G . PASS END=109527422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 109527423 . T . PASS END=109527423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 109527424 . T . PASS END=109527441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1109:0,80,255:31,0 chr2 109527442 . T . PASS END=109527442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:26,0 chr2 109527443 . G . PASS END=109527481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:33,0 chr2 109527482 . C . PASS END=109527503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:26,0 chr2 109527504 . G . PASS END=109527528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,660:0,54,255:19,0 chr2 109529133 . C . PASS END=109529135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr2 109529136 . T . PASS END=109529150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:30,0 chr2 109529151 . A . PASS END=109529151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr2 109529152 . A . PASS END=109529157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1148:0,93,255:31,0 chr2 109529158 . A . PASS END=109529158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:28,0 chr2 109529159 . C . PASS END=109529163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 109529164 . T . PASS END=109529164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 109529165 . G . PASS END=109529181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 109529182 . C . PASS END=109529199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr2 109529200 . C . PASS END=109529200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr2 109529201 . T . PASS END=109529220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:22,0 chr2 109539823 . C . PASS END=109539909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:42:0,93,1483:0,93,255:40,0 chr2 109545654 . C . PASS END=109545656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 109545657 . G . PASS END=109545657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 109545658 . G . PASS END=109545806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:29:0,82,1072:0,82,255:40,0 chr2 109545807 . T . PASS END=109545807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1511:0,77,255:34,0 chr2 109545808 . C . PASS END=109545814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1314:0,81,255:35,0 chr2 109545815 . T . PASS END=109545817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1329:0,75,255:35,0 chr2 109545818 . G . PASS END=109545819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:35,0 chr2 109545820 . T . PASS END=109545826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr2 109545827 . G . PASS END=109545829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:31,0 chr2 109545830 . A . PASS END=109545835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:35:0,78,1170:0,94,255:26,0 chr2 109545837 . T . PASS END=109545837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 109546576 . C . PASS END=109546599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,847:0,62,255:26,0 chr2 109546600 . A . PASS END=109546602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 109546603 . C . PASS END=109546604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,1 chr2 109546605 . G . PASS END=109546671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1179:0,87,255:37,0 chr2 109546672 . C . PASS END=109546672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:28,0 chr2 109546673 . G . PASS END=109546684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1133:0,80,255:29,0 chr2 109546685 . C . PASS END=109546693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:25,0 chr2 109546694 . G . PASS END=109546698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr2 109546705 . A . PASS END=109546705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:17,0 chr2 109547419 . C . PASS END=109547488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,120,1512:0,120,255:40,0 chr2 109582079 . C . PASS END=109582095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,121,255:40,0 chr2 109582096 . C . LowGQ END=109582097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,15:56:0:55:0,0,1006:74,0,255:40,0 chr2 109582098 . T . PASS END=109582098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 109582099 . C . PASS END=109582099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,8:55:31:55:0,31,1287:0,31,255:40,0 chr2 109582100 . C . LowGQ END=109582100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,11:55:0:55:0,0,1330:54,0,255:40,0 chr2 109582101 . T . PASS END=109582143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:56:0,120,1800:0,135,255:40,0 chr2 109582144 . C . PASS END=109582204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,100,1692:0,100,255:40,0 chr2 109605427 . T . PASS END=109605427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 109605468 . G . PASS END=109605468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 109605526 . C . PASS END=109605526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 109605586 . A . PASS END=109605586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 109605623 . A . PASS END=109605623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 109605632 . C . PASS END=109605632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 109605635 . G . PASS END=109605635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr2 109605653 . G . PASS END=109605653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 109605745 . C . PASS END=109605745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 109605791 . A . PASS END=109605791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 109605811 . T . PASS END=109605811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:22,0 chr2 109745997 . A . PASS END=109746015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr2 109746016 . G . PASS END=109746020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 109746021 . T . PASS END=109746021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:9,0 chr2 109746022 . G . PASS END=109746037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 109746038 . C . PASS END=109746050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 109746051 . C . PASS END=109746062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:7:0,18,270:0,21,255:6,0 chr2 109746063 . G . LowGQ END=109746063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,192:9,0,201:5,0 chr2 109746064 . A . PASS END=109746065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 109746066 . G . LowGQ END=109746067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:7:0,0,164:0,0,181:6,0 chr2 109746068 . G . PASS END=109746068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 109746069 . G . PASS END=109746069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr2 109746070 . A . PASS END=109746071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr2 109746072 . A . LowGQ END=109746072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,169:9,0,179:5,0 chr2 109746073 . G . PASS END=109746075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 109746076 . C . LowGQ END=109746077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,70:0,0,118:6,0 chr2 109746078 . G . PASS END=109746081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,250:7,0 chr2 109746082 . A . PASS END=109746084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:6,0 chr2 109746085 . G . PASS END=109746085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr2 109746086 . A . PASS END=109746086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 109746087 . C . PASS END=109746089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,203:0,21,203:7,0 chr2 109746090 . C . LowGQ END=109746090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,161:12,0,173:5,0 chr2 109746091 . G . PASS END=109746094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,243:0,21,243:8,0 chr2 109746095 . T . LowGQ END=109746096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:0,0,187:7,0 chr2 109746097 . G . PASS END=109746098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 109746099 . G . PASS END=109746100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr2 109746101 . G . PASS END=109746101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 109746102 . G . LowGQ END=109746102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,184:9,0,193:6,0 chr2 109746103 . C . PASS END=109746104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 109746105 . G . LowGQ END=109746105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,155:9,0,164:6,0 chr2 109746106 . C . PASS END=109746130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr2 109746131 . C . PASS END=109746133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 109746134 . G . PASS END=109746134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr2 109746135 . G . PASS END=109746141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 109746142 . C . PASS END=109746153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 109746154 . A . PASS END=109746158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 109746159 . C . PASS END=109746181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr2 109746182 . G . PASS END=109746184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 109746185 . C . PASS END=109746203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 109746204 . G . PASS END=109746208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 109746209 . G . PASS END=109746221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:7,0 chr2 109746222 . A . PASS END=109746222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 109746223 . C . PASS END=109746239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 109746240 . C . PASS END=109746266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 109746267 . G . PASS END=109746268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 109746269 . G . PASS END=109746317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr2 109746318 . C . PASS END=109746334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 109746335 . G . PASS END=109746347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 109746348 . C . PASS END=109746370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 109746371 . C . PASS END=109746382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,255:6,0 chr2 109746383 . C . PASS END=109746386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,249:3,0 chr2 109746387 . C . PASS END=109746414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:6,0 chr2 109746415 . T . PASS END=109746428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 109746429 . G . PASS END=109746463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr2 109746464 . G . LowGQ END=109746464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,163:13,0,176:4,0 chr2 109746465 . G . PASS END=109746465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 109746466 . C . PASS END=109746466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr2 109746467 . A . PASS END=109746468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 109746469 . G . LowGQ END=109746469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,202:10,0,212:5,0 chr2 109746470 . C . PASS END=109746471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 109746472 . G . PASS END=109746472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 109746473 . C . PASS END=109746473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr2 109746474 . A . PASS END=109746474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 109746475 . C . PASS END=109746476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 109746477 . C . LowGQ END=109746477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,147:26,0,173:5,0 chr2 109746478 . C . PASS END=109746482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 109746483 . T . PASS END=109746483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 109746484 . C . PASS END=109746489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 109746490 . T . LowGQ END=109746490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,225:15,0,239:7,0 chr2 109746491 . T . PASS END=109746493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr2 109746494 . C . PASS END=109746494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 109746495 . C . PASS END=109746497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 109746498 . T . LowGQ END=109746498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,241:7,0,247:7,0 chr2 109746499 . C . PASS END=109746506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:8,0 chr2 109746507 . G . LowGQ END=109746507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:7,0 chr2 109746508 . C . PASS END=109746509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 109746510 . G . PASS END=109746511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,231:0,7,231:7,0 chr2 109746512 . C . PASS END=109746546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,250:0,24,250:8,0 chr2 109746547 . G . PASS END=109746547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr2 109746548 . C . PASS END=109746558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr2 109746559 . C . PASS END=109746566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 109746567 . A . PASS END=109746567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:5,0 chr2 109746568 . A . PASS END=109746569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:5,0 chr2 109960685 . C . PASS END=109960949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:34:0,93,1349:0,93,255:40,0 chr2 109960950 . C . PASS END=109960950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 109960951 . G . PASS END=109960983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1279:0,89,255:35,0 chr2 109960984 . G . PASS END=109960984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr2 109960985 . G . PASS END=109961048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1064:0,87,255:37,0 chr2 109961049 . A . PASS END=109961049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:27,0 chr2 109961050 . T . PASS END=109961057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1202:0,83,255:32,0 chr2 109961058 . T . PASS END=109961058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 109961059 . G . PASS END=109961066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 109961067 . A . PASS END=109961075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,1080:0,66,255:26,0 chr2 109961076 . C . PASS END=109961108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1009:0,87,255:30,0 chr2 109961109 . T . PASS END=109961109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 109961110 . G . PASS END=109961115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 109961116 . C . PASS END=109961127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 109961128 . A . PASS END=109961128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:18,0 chr2 109961129 . G . PASS END=109961155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 109961156 . A . PASS END=109961156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr2 109961157 . A . PASS END=109961170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr2 109961171 . A . PASS END=109961171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr2 109961172 . G . PASS END=109961172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 109961173 . T . PASS END=109961173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:21,0 chr2 109961174 . T . PASS END=109961189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 109961190 . C . PASS END=109961204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,53,255:19,0 chr2 109961205 . G . PASS END=109961218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 109961219 . T . PASS END=109961219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:20,0 chr2 109961220 . G . PASS END=109961226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:23,0 chr2 109961227 . G . PASS END=109961227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 109961228 . G . PASS END=109961235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 109961236 . C . PASS END=109961236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 109961237 . G . PASS END=109961239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr2 109961240 . C . PASS END=109961240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:24,0 chr2 109961241 . A . PASS END=109961241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 109961242 . G . PASS END=109961247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 109961248 . T . PASS END=109961248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 109961249 . G . PASS END=109961282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:30,0 chr2 109961283 . G . PASS END=109961283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 109961284 . G . PASS END=109961325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,89,255:35,0 chr2 109961326 . T . PASS END=109961326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:32,0 chr2 109961327 . C . PASS END=109961349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1164:0,85,255:33,0 chr2 109961350 . C . PASS END=109961363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:24,0 chr2 109961364 . A . PASS END=109961364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 109961365 . G . PASS END=109961374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,787:0,69,255:23,0 chr2 109964130 . A . PASS END=109964139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr2 109964140 . T . PASS END=109964140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 109964141 . G . PASS END=109964156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 109964157 . G . PASS END=109964160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 109964161 . T . PASS END=109964161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,466:0,9,255:14,0 chr2 109964162 . C . PASS END=109964162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 109964163 . T . PASS END=109964163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 109964164 . A . PASS END=109964176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,645:0,48,255:19,0 chr2 109964177 . G . PASS END=109964183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 109964184 . C . PASS END=109964184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 109964185 . C . PASS END=109964195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 109964196 . A . PASS END=109964196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr2 109964197 . A . PASS END=109964201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 109964202 . A . PASS END=109964202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 109964203 . A . PASS END=109964207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,711:0,66,255:22,0 chr2 109964208 . G . PASS END=109964208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 109964209 . G . PASS END=109964212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 109964213 . C . PASS END=109964213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 109964214 . A . PASS END=109964215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 109964216 . C . PASS END=109964216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 109964217 . A . PASS END=109964223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,799:0,66,255:22,0 chr2 109964224 . T . PASS END=109964235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,56,255:21,0 chr2 109964236 . T . PASS END=109964245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,868:0,61,255:26,0 chr2 109964246 . G . PASS END=109964266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1186:0,83,255:33,0 chr2 109964267 . C . PASS END=109964267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr2 109964268 . G . PASS END=109964288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:32,0 chr2 109964289 . G . PASS END=109964289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 109964290 . C . PASS END=109964291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 109964292 . A . PASS END=109964292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 109964293 . G . PASS END=109964301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 109964302 . A . PASS END=109964302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr2 109964303 . G . PASS END=109964303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 109964304 . T . PASS END=109964318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:28:0,70,986:0,70,255:27,0 chr2 109964319 . C . PASS END=109964328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 109964329 . C . PASS END=109964354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,854:0,72,255:25,0 chr2 109964355 . T . PASS END=109964355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 109964356 . T . PASS END=109964360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 109964361 . A . PASS END=109964361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr2 109964362 . T . PASS END=109964365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 109964366 . G . PASS END=109964366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 109964367 . G . PASS END=109964376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr2 109964377 . A . PASS END=109964383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,72,255:15,0 chr2 109964384 . G . PASS END=109964385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:39:24:0,39,585:0,55,255:13,0 chr2 109964386 . A . PASS END=109964405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 109988042 . G . PASS END=109988134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:37:0,90,1350:0,103,255:40,0 chr2 109988135 . G . PASS END=109988137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:26,0 chr2 110015046 . C . PASS END=110015101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:23,0 chr2 110015102 . A . PASS END=110015102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 110015103 . T . PASS END=110015114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:24,0 chr2 110015115 . G . PASS END=110015115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 110015116 . C . PASS END=110015127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:23,0 chr2 110015128 . C . PASS END=110015128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr2 110015129 . T . PASS END=110015149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr2 110015150 . C . PASS END=110015150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:24,0 chr2 110015151 . G . PASS END=110015172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,925:0,64,255:26,0 chr2 110015173 . G . PASS END=110015173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:24,0 chr2 110015174 . C . PASS END=110015184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,73,255:25,0 chr2 110015185 . C . PASS END=110015185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:23,0 chr2 110015186 . G . PASS END=110015189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:24,0 chr2 110015190 . A . PASS END=110015190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,809:0,44,255:23,0 chr2 110015191 . G . PASS END=110015194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,856:0,61,255:25,0 chr2 110015195 . C . PASS END=110015195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 110015196 . T . PASS END=110015201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 110015202 . C . PASS END=110015202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,815:0,12,255:24,0 chr2 110015203 . G . PASS END=110015203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 110015204 . G . PASS END=110015205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,956:0,68,255:27,0 chr2 110015206 . G . PASS END=110015206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,953:0,40,255:26,0 chr2 110015207 . T . PASS END=110015210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 110015211 . G . PASS END=110015211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,876:0,18,255:25,0 chr2 110015212 . A . PASS END=110015212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,927:0,70,255:27,0 chr2 110015213 . T . PASS END=110015215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 110015216 . C . PASS END=110015216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,878:0,40,255:26,0 chr2 110015217 . A . PASS END=110015218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 110015219 . G . PASS END=110015245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,858:0,67,255:26,0 chr2 110015246 . C . PASS END=110015246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr2 110015247 . A . PASS END=110015258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,917:0,67,255:26,0 chr2 110015259 . G . PASS END=110015301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1202:0,83,255:34,0 chr2 110015302 . T . PASS END=110015302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:31,0 chr2 110015303 . G . PASS END=110015317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1216:0,83,255:32,0 chr2 110015318 . A . PASS END=110015318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:27,0 chr2 110015319 . G . PASS END=110015337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 110015338 . A . PASS END=110015338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 110015339 . T . PASS END=110015374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1072:0,80,255:31,0 chr2 110015375 . T . PASS END=110015397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:26:0,65,984:0,65,255:26,0 chr2 110015398 . A . PASS END=110015398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:20,0 chr2 110015399 . G . PASS END=110015399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 110035995 . G . PASS END=110035997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 110035998 . G . PASS END=110036085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1131:0,80,255:33,0 chr2 110036086 . T . PASS END=110036087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 110036088 . C . PASS END=110036088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 110036089 . C . PASS END=110036098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:26,0 chr2 110048957 . G . PASS END=110048958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 110048959 . A . PASS END=110048959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 110048960 . C . PASS END=110048961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 110048962 . T . PASS END=110048962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr2 110048963 . G . PASS END=110048966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 110048967 . C . PASS END=110049104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:30:0,87,1209:0,88,255:40,0 chr2 110049105 . A . PASS END=110049105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:29,0 chr2 110049106 . A . PASS END=110049127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr2 110053349 . G . PASS END=110053350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 110053351 . T . PASS END=110053351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 110053352 . G . PASS END=110053362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr2 110053363 . G . PASS END=110053395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,560:0,45,255:17,0 chr2 110053396 . G . PASS END=110053402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,730:0,63,255:21,0 chr2 110053403 . A . PASS END=110053403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr2 110053404 . C . PASS END=110053416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,762:0,63,255:22,0 chr2 110053417 . T . PASS END=110053419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 110053420 . C . PASS END=110053466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr2 110053467 . G . PASS END=110053488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 110053489 . T . PASS END=110053532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr2 110053533 . C . PASS END=110053545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 110053546 . G . PASS END=110053551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 110053552 . G . PASS END=110053552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 110053553 . G . PASS END=110053570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,808:0,63,255:22,0 chr2 110053571 . G . PASS END=110053602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:19,0 chr2 110065626 . C . PASS END=110065626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 110065627 . T . PASS END=110065633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr2 110065634 . T . PASS END=110065634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr2 110065635 . C . PASS END=110065693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1147:0,80,255:39,0 chr2 110065694 . T . PASS END=110065694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1211:0,56,255:36,0 chr2 110065695 . C . PASS END=110065714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,105,1474:0,110,255:40,0 chr2 110065715 . A . PASS END=110065715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1402:0,65,255:34,0 chr2 110065716 . C . PASS END=110065746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1215:0,84,255:35,0 chr2 110065747 . G . PASS END=110065760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 110065761 . A . PASS END=110065761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:25,0 chr2 110065762 . G . PASS END=110065766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:27,0 chr2 110065767 . C . PASS END=110065768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:23,0 chr2 110065769 . G . PASS END=110065769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:21,0 chr2 110065770 . T . PASS END=110065779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:23,0 chr2 110065780 . C . PASS END=110065783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:21:0,53,814:0,53,255:19,0 chr2 110065784 . C . PASS END=110065784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 110065785 . G . PASS END=110065787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 110065788 . C . PASS END=110065789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 110065790 . G . PASS END=110065794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:56:22:0,56,855:0,56,255:19,0 chr2 110065795 . C . PASS END=110065808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 110065809 . C . PASS END=110065809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr2 110065810 . A . PASS END=110065815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 110065816 . A . PASS END=110065832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:17,0 chr2 110065833 . A . PASS END=110065833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 110065834 . C . PASS END=110065839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:14,0 chr2 110065840 . T . PASS END=110065844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:15:0,39,585:0,45,255:13,0 chr2 110065845 . C . PASS END=110065847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110065848 . A . PASS END=110065848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:13,0 chr2 110065849 . C . PASS END=110065880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,416:0,45,255:15,0 chr2 110065881 . G . PASS END=110065887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 110065888 . G . PASS END=110065894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr2 110065895 . T . PASS END=110065895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 110065896 . C . PASS END=110065901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 110065902 . C . PASS END=110065902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 110065903 . C . PASS END=110065903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 110065904 . A . PASS END=110065908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 110065909 . C . PASS END=110065909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110065910 . A . PASS END=110065910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 110065911 . C . PASS END=110065911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110065912 . G . PASS END=110065912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 110065913 . G . PASS END=110065920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110065921 . A . PASS END=110065921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr2 110065922 . C . PASS END=110065922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110065923 . T . PASS END=110065925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 110065926 . A . PASS END=110065926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 110065927 . C . PASS END=110065941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr2 110065942 . A . PASS END=110065942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 110065943 . A . PASS END=110065943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 110065944 . A . PASS END=110065945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr2 110096259 . A . PASS END=110096263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:18,0 chr2 110096264 . C . PASS END=110096264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 110096265 . A . PASS END=110096279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr2 110096280 . C . PASS END=110096283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:23,0 chr2 110096284 . T . PASS END=110096284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 110096285 . G . PASS END=110096291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 110096292 . A . PASS END=110096292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:22,0 chr2 110096293 . C . PASS END=110096304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:26,0 chr2 110096305 . C . PASS END=110096316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:33,0 chr2 110096317 . C . PASS END=110096317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr2 110096318 . C . PASS END=110096338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:98:36:0,98,1410:0,98,255:37,0 chr2 110096339 . C . PASS END=110096339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:36,0 chr2 110096340 . C . PASS END=110096458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:34:0,80,1215:0,80,255:40,0 chr2 110096459 . C . PASS END=110096462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 110096463 . C . PASS END=110096470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 110096471 . A . PASS END=110096501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:25,0 chr2 110096502 . G . PASS END=110096504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,715:0,49,255:19,0 chr2 110096505 . A . PASS END=110096506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 110096507 . T . PASS END=110096550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,527:0,41,255:19,0 chr2 110096551 . G . PASS END=110096552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 110107061 . A . PASS END=110107070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,752:0,63,255:24,0 chr2 110107071 . A . PASS END=110107071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 110107072 . G . PASS END=110107075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:25,0 chr2 110107076 . G . PASS END=110107076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 110107077 . G . PASS END=110107078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr2 110107079 . C . PASS END=110107125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1000:0,81,255:31,0 chr2 110107126 . C . PASS END=110107126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 110107127 . C . PASS END=110107134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 110107135 . T . PASS END=110107137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 110107138 . G . PASS END=110107141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 110107142 . C . PASS END=110107163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:24:0,69,969:0,72,255:26,0 chr2 110107164 . C . PASS END=110107164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr2 110107165 . C . PASS END=110107174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,947:0,62,255:26,0 chr2 110107175 . C . PASS END=110107175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:22,0 chr2 110107176 . T . PASS END=110107176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 110107177 . G . PASS END=110107188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:30,0 chr2 110107189 . A . PASS END=110107189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 110107190 . G . PASS END=110107211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr2 110107212 . T . PASS END=110107215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 110107216 . C . PASS END=110107227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,83,255:28,0 chr2 110107228 . G . PASS END=110107241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,909:0,67,255:26,0 chr2 110107242 . C . PASS END=110107244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 110107245 . T . PASS END=110107245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 110107246 . A . PASS END=110107253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,932:0,81,255:28,0 chr2 110107254 . A . PASS END=110107254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 110107255 . G . PASS END=110107257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:29,0 chr2 110107258 . G . PASS END=110107259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,996:0,73,255:28,0 chr2 110107260 . A . PASS END=110107263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 110107264 . T . PASS END=110107264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 110107265 . G . PASS END=110107273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1032:0,87,255:29,0 chr2 110107274 . A . PASS END=110107274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 110107275 . T . PASS END=110107281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 110107282 . T . PASS END=110107282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1015:0,51,255:27,0 chr2 110107283 . C . PASS END=110107306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1149:0,82,255:33,0 chr2 110107307 . G . PASS END=110107307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:31,0 chr2 110107308 . A . PASS END=110107321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:31,0 chr2 110107322 . T . PASS END=110107322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 110107323 . C . PASS END=110107336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:31,0 chr2 110107337 . G . PASS END=110107349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:25:0,65,1035:0,65,255:25,0 chr2 110107350 . T . PASS END=110107350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 110107351 . G . PASS END=110107364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,884:0,69,255:23,0 chr2 110107365 . C . PASS END=110107392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,607:0,40,255:19,0 chr2 110259080 . G . PASS END=110259248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:33:0,81,1215:0,92,255:40,0 chr2 110301699 . T . PASS END=110301827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:40:0,117,1755:0,120,255:40,7 chr2 110301828 . T . PASS END=110301828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,7:107:70:107:0,70,3340:0,70,255:40,3 chr2 110301829 . T . PASS END=110301901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:68:0,120,1800:0,165,255:40,1 chr2 110303002 . T . PASS END=110303119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,114,1710:0,142,255:40,0 chr2 110303623 . T . PASS END=110303814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,111,1651:0,116,255:40,0 chr2 110310664 . C . PASS END=110310664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,7:49:30:49:0,30,1199:0,30,255:40,0 chr2 110310665 . T . PASS END=110310796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,104,1563:0,104,255:40,0 chr2 110321943 . C . PASS END=110322111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:38:0,81,1139:0,81,255:40,1 chr2 110323340 . C . PASS END=110323436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,101,1262:0,101,255:40,0 chr2 110325392 . A . PASS END=110325408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,958:0,81,255:37,0 chr2 110325409 . C . PASS END=110325409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:37,0 chr2 110325410 . C . PASS END=110325543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:38:0,81,1215:0,114,255:40,0 chr2 110325544 . T . PASS END=110325553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:69:28:0,69,1035:0,72,255:25,0 chr2 110332158 . C . PASS END=110332159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 110332160 . T . PASS END=110332160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 110332161 . G . PASS END=110332163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,817:0,72,255:26,0 chr2 110332164 . G . PASS END=110332174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:31,0 chr2 110332175 . T . PASS END=110332175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 110332176 . C . PASS END=110332179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1134:0,96,255:36,0 chr2 110332180 . G . PASS END=110332328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:37:0,93,1346:0,101,255:40,0 chr2 110332329 . A . PASS END=110332329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1363:0,62,255:30,0 chr2 110332330 . A . PASS END=110332338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,102,255:30,0 chr2 110332339 . T . PASS END=110332339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 110332340 . G . PASS END=110332344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr2 110342703 . C . PASS END=110342898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:34:0,96,1440:0,102,255:40,0 chr2 110343298 . C . PASS END=110343415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:96:39:0,96,1403:0,96,255:40,0 chr2 110350624 . T . PASS END=110350696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,191,255:40,0 chr2 110370689 . C . PASS END=110370691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:32,0 chr2 110371375 . C . PASS END=110371377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr2 110371378 . G . PASS END=110371378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 110371379 . T . PASS END=110371380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 110371381 . C . PASS END=110371383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 110371384 . C . PASS END=110371384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 110371385 . G . PASS END=110371385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:20,0 chr2 110371386 . C . PASS END=110371386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 110371387 . C . PASS END=110371388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,774:0,30,255:19,0 chr2 110371389 . C . PASS END=110371389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 110371390 . C . PASS END=110371390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 110371391 . T . PASS END=110371396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 110371397 . G . PASS END=110371398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:53:23:0,53,820:0,53,255:20,0 chr2 110371399 . G . PASS END=110371400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 110371401 . C . PASS END=110371401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 110371402 . C . PASS END=110371402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 110371403 . A . PASS END=110371403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 110371404 . T . PASS END=110371404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 110372067 . A . PASS END=110372073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,139:0,12,139:6,0 chr2 110372074 . G . PASS END=110372074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 110372075 . G . PASS END=110372106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr2 110372107 . G . PASS END=110372113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 110372114 . G . PASS END=110372114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 110372115 . G . PASS END=110372118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 110372119 . T . LowGQ END=110372119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,257:4,0,255:8,0 chr2 110372120 . G . PASS END=110372127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 110372128 . T . PASS END=110372128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 110372129 . C . PASS END=110372130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 110372131 . T . PASS END=110372131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 110372132 . G . PASS END=110372136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 110372137 . A . PASS END=110372137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 110372138 . G . PASS END=110372143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 110372144 . G . PASS END=110372154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:13,0 chr2 110372155 . T . PASS END=110372161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 110372162 . C . PASS END=110372162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 110372163 . G . PASS END=110372165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 110372166 . C . PASS END=110372169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:15,0 chr2 110372170 . T . PASS END=110372170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr2 110372171 . G . PASS END=110372174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110372175 . C . PASS END=110372178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 110372179 . T . PASS END=110372179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr2 110372180 . C . PASS END=110372190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:12,0 chr2 110372191 . T . PASS END=110372191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 110372192 . A G, 86.12 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,5,0:0,8,0:36:124,39,0,496,39,496:255,39,0:0,0:8.6124e+01,3.6124e+01,1.0604e-03,4.5000e+02,7.0894e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,6:0,0,7,6 chr2 110372193 . G . PASS END=110372229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,389:0,36,255:12,0 chr2 110372230 . A . PASS END=110372234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:13,0 chr2 110372235 . A . PASS END=110372235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 110372236 . A . PASS END=110372237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 110372238 . G . PASS END=110372244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 110372245 . T . PASS END=110372250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 110372251 . C . PASS END=110372251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 110372252 . C . PASS END=110372283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr2 110372284 . G . PASS END=110372284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 110372285 . C . PASS END=110372289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 110372290 . A . PASS END=110372290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:11,0 chr2 110372291 . G . PASS END=110372300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 110372301 . C . PASS END=110372301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 110372302 . T . PASS END=110372306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 110372307 . A . PASS END=110372307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 110372308 . A . PASS END=110372341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr2 110372342 . G . PASS END=110372363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr2 110372364 . A . PASS END=110372372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 110372373 . C . PASS END=110372380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 110372381 . C . PASS END=110372381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 110372382 . C . PASS END=110372383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 110372384 . C . PASS END=110372384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 110372385 . G . PASS END=110372416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr2 110372417 . G . PASS END=110372419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 110372420 . C . PASS END=110372420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 110372421 . C . PASS END=110372422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 110372423 . C . PASS END=110372438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 110372439 . G . PASS END=110372443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110372444 . G . PASS END=110372451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 110372452 . G . PASS END=110372453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr2 110372454 . C . PASS END=110372459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr2 110372460 . C . PASS END=110372462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 110372463 . G . PASS END=110372463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr2 110372464 . A . PASS END=110372466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 110372467 . T . PASS END=110372467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 110372468 . G . PASS END=110372478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 110372479 . A . PASS END=110372499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr2 110372500 . G . PASS END=110372503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 110372504 . G . PASS END=110372504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 110372505 . C . PASS END=110372514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 110372515 . C . PASS END=110372515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 110372516 . C . PASS END=110372523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr2 110372524 . G . PASS END=110372524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 110372525 . C . PASS END=110372531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 110372532 . A . PASS END=110372532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,348:0,19,255:11,0 chr2 110372533 . A . PASS END=110372553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:13,0 chr2 110372554 . C . PASS END=110372554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110372555 . C . PASS END=110372608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 110372609 . T . PASS END=110372609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 110372610 . G . PASS END=110372622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 110372623 . C . PASS END=110372623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr2 110372624 . G . PASS END=110372624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 110372625 . G . PASS END=110372643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,446:0,42,255:16,0 chr2 110372644 . T . PASS END=110372644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 110372645 . G . PASS END=110372659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr2 110372660 . G . PASS END=110372660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 110372661 . A . PASS END=110372661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 110372662 . G . PASS END=110372662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 110372663 . G . PASS END=110372666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 110372667 . G . PASS END=110372667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 110372668 . C . PASS END=110372707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,574:0,40,255:19,0 chr2 110372708 . G . PASS END=110372709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 110372710 . A . PASS END=110372710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 110372711 . G . PASS END=110372711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 110372712 . C . PASS END=110372713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 110372714 . G . PASS END=110372714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr2 110372715 . A . PASS END=110372716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 110372717 . G . PASS END=110372717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 110372718 . A . PASS END=110372718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,443:0,18,255:13,0 chr2 110372719 . G . PASS END=110372721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 110372722 . G . PASS END=110372724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 110372725 . T . PASS END=110372725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 110372726 . G . PASS END=110372726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 110372727 . T . PASS END=110372730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 110372731 . C . PASS END=110372731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 110372732 . C . PASS END=110372733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 110372734 . G . PASS END=110372734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 110372735 . G . PASS END=110372738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 110372739 . A . PASS END=110372739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:14,0 chr2 110372740 . G . PASS END=110372741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 110372742 . A . PASS END=110372750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,507:0,45,255:15,0 chr2 110372751 . A . PASS END=110372770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 110372771 . C . PASS END=110372773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 110372774 . C . PASS END=110372774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 110372775 . A . PASS END=110372775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 110372776 . G . PASS END=110372777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 110372778 . G . PASS END=110372780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 110372781 . G . PASS END=110372781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 110372782 . G . PASS END=110372800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,544:0,48,255:16,0 chr2 110372801 . A . PASS END=110372801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,492:0,12,255:15,0 chr2 110372802 . T . PASS END=110372803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 110372804 . G . PASS END=110372804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:16,0 chr2 110372805 . G . PASS END=110372826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:16,0 chr2 110372827 . A . PASS END=110372845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,474:0,32,255:13,0 chr2 110372846 . C . PASS END=110372898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:14:0,40,512:0,40,255:18,0 chr2 110372899 . G . PASS END=110372899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 110372900 . C . PASS END=110372908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 110372909 . C . PASS END=110372941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 110372942 . C . PASS END=110372942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 110372943 . C . PASS END=110372946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 110372947 . T . PASS END=110372956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 110372957 . G . PASS END=110372961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr2 110372962 . T . PASS END=110372990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,621:0,41,255:17,0 chr2 110372991 . G . PASS END=110372992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:14,0 chr2 110372993 . C . PASS END=110373062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,623:0,41,255:19,0 chr2 110373063 . A . PASS END=110373065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 110373066 . A . PASS END=110373066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 110373067 . T . PASS END=110373090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 110373091 . A . PASS END=110373099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr2 110373100 . T . PASS END=110373105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:20:0,39,585:0,60,255:13,0 chr2 110373106 . T . PASS END=110373171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,607:0,41,255:19,0 chr2 110373172 . A . PASS END=110373177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 110373178 . G . PASS END=110373181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr2 110373182 . C . PASS END=110373195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 110373196 . A . PASS END=110373196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 110373197 . G . PASS END=110373203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 110373204 . C . PASS END=110373204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 110373205 . A . PASS END=110373211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 110373212 . G . PASS END=110373212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 110373213 . A . PASS END=110373234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr2 110373235 . T . PASS END=110373235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:22,0 chr2 110373236 . C . PASS END=110373236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 110373237 . A . PASS END=110373237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 110373238 . A . PASS END=110373239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 110373240 . A . PASS END=110373240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:19,0 chr2 110373241 . A . PASS END=110373241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr2 110373242 . C . PASS END=110373256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 110373257 . G . PASS END=110373257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 110373258 . G . PASS END=110373258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 110373259 . A . PASS END=110373259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 110373260 . C . PASS END=110373263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 110373264 . G . PASS END=110373264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,694:0,35,255:21,0 chr2 110373265 . G . PASS END=110373274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,715:0,47,255:19,0 chr2 110373275 . A . PASS END=110373275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:17,0 chr2 110373276 . A . PASS END=110373292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr2 110373293 . C . PASS END=110373293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 110373294 . G . PASS END=110373314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr2 110373315 . A . PASS END=110373315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,598:0,27,255:14,0 chr2 110373316 . A . PASS END=110373357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,592:0,40,255:19,0 chr2 110373358 . C . PASS END=110373374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr2 110373375 . G . PASS END=110373398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,52,255:19,0 chr2 110373399 . G . PASS END=110373429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,917:0,72,255:26,0 chr2 110373430 . A . PASS END=110373489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,980:0,81,255:33,0 chr2 110373490 . T . PASS END=110373490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:29,0 chr2 110373491 . C . PASS END=110373498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 110373499 . G . PASS END=110373499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 110373500 . A . PASS END=110373507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 110373508 . T . PASS END=110373518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,74,255:25,0 chr2 110373519 . A . PASS END=110373535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:18:0,44,675:0,44,255:19,0 chr2 110373536 . C . PASS END=110373536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr2 110373537 . C . PASS END=110373538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 110373539 . A . PASS END=110373539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:14,0 chr2 110373540 . G . PASS END=110373552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr2 110373553 . A . PASS END=110373553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 110373554 . G . PASS END=110373556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 110373557 . C . PASS END=110373562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 110373563 . G . PASS END=110373573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 110373574 . T . PASS END=110373575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 110373576 . G . PASS END=110373582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 110373583 . A . PASS END=110373606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 110373607 . C . PASS END=110373607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 110373608 . C . PASS END=110373618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 110373619 . G . PASS END=110373620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 110373621 . C . PASS END=110373623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 110373624 . A . PASS END=110373642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,349:0,27,255:9,0 chr2 110373643 . A . PASS END=110373643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 110373644 . A . PASS END=110373644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 110518199 . A . PASS END=110518204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:43:16:0,43,590:0,43,255:19,0 chr2 110518205 . C . PASS END=110518219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr2 110518220 . T C, 109.50 PASS DP=22;MQ=110.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,12,0:0,10,0:63:147,66,0,812,66,812:255,66,0:0,0:1.0950e+02,6.2754e+01,2.3297e-06,4.5000e+02,9.7524e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,8:0,0,14,8 chr2 110518221 . C . PASS END=110518222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 110518223 . T . PASS END=110518223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 110518224 . C . PASS END=110518257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,823:0,62,255:26,0 chr2 110518258 . C . PASS END=110518286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,848:0,61,255:26,0 chr2 110518287 . C . PASS END=110518288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 110518289 . T . PASS END=110518294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,929:0,65,255:26,0 chr2 110518295 . C . PASS END=110518295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr2 110518296 . A . PASS END=110518305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:23,0 chr2 110518306 . T . PASS END=110518323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,53,255:19,0 chr2 110518324 . A . PASS END=110518324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 110518325 . G . PASS END=110518327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 110518328 . A . PASS END=110518328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:13,0 chr2 110518329 . T . PASS END=110518331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 110518332 . G . PASS END=110518338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:11,0 chr2 110518339 . A . PASS END=110518344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 110518345 . T . PASS END=110518348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:18:13:0,18,270:0,39,255:6,0 chr2 110552043 . A . LowDepth;LowGQ END=110552114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110559360 . A . LowDepth;LowGQ END=110559427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110561009 . A . LowDepth;LowGQ END=110561120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110561556 . C . LowDepth;LowGQ END=110561708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110565751 . G . LowDepth;LowGQ END=110565981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110566327 . G . LowDepth;LowGQ END=110566472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110571037 . T . LowDepth;LowGQ END=110571232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110577273 . G . LowDepth;LowGQ END=110577360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110579482 . G . LowDepth;LowGQ END=110579691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110581799 . G . LowDepth;LowGQ END=110581980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110582064 . G . LowDepth;LowGQ END=110582239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110582407 . A . LowDepth;LowGQ END=110582530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110583453 . G . LowDepth;LowGQ END=110583611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110583878 . G . LowDepth;LowGQ END=110584015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110584278 . A . LowDepth;LowGQ END=110584424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110585369 . T . LowDepth;LowGQ END=110585548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110585642 . T . LowDepth;LowGQ END=110585725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110588894 . A . LowDepth;LowGQ END=110589029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110590428 . A . LowDepth;LowGQ END=110590540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110592574 . T . LowDepth;LowGQ END=110592668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110593396 . G . LowDepth;LowGQ END=110595619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110596511 . G . LowDepth;LowGQ END=110596614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110602680 . A . LowDepth;LowGQ END=110602819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110605387 . C . LowDepth;LowGQ END=110605588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110613439 . A . LowDepth;LowGQ END=110613473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110656306 . A . LowDepth;LowGQ END=110656487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110660830 . C . LowDepth;LowGQ END=110660989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110663457 . G . LowDepth;LowGQ END=110663468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110671988 . T . PASS END=110672054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,882:0,90,255:40,0 chr2 110673529 . G . LowDepth;LowGQ END=110673649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110674084 . A . LowDepth;LowGQ END=110674233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110677066 . A . LowDepth;LowGQ END=110677220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110677831 . C . LowDepth;LowGQ END=110677923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110679217 . C . LowDepth;LowGQ END=110679265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110681925 . T . LowDepth;LowGQ END=110682000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110682199 . G . LowDepth;LowGQ END=110682271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr2 110682272 . A . LowDepth;LowGQ END=110682346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110782179 . T . LowDepth;LowGQ END=110782285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr2 110782286 . A . LowDepth;LowGQ END=110782309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110782648 . C . LowDepth;LowGQ END=110782872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110782980 . C . LowDepth;LowGQ END=110783262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110784963 . C . LowDepth;LowGQ END=110784999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110843272 . T . LowDepth;LowGQ END=110843334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110845149 . C . LowDepth;LowGQ END=110845274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 110849180 . C . PASS END=110849197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1247:0,86,255:37,0 chr2 110849198 . A . PASS END=110849198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1228:0,72,255:36,0 chr2 110849199 . A . PASS END=110849301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:37:0,81,1215:0,95,255:40,0 chr2 110849302 . C . PASS END=110849344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,800:0,66,255:26,0 chr2 110849345 . T . PASS END=110849345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,713:0,49,255:21,0 chr2 110849346 . A . PASS END=110849346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 110849347 . T . PASS END=110849347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr2 110855076 . C . PASS END=110855085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 110855086 . C . PASS END=110855087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 110855088 . G . PASS END=110855101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 110855102 . A . PASS END=110855102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:13,0 chr2 110855103 . T . PASS END=110855117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 110855118 . C . PASS END=110855122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 110855123 . G T, 88.14 PASS DP=14;MQ=160.02;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,3,0:0,11,0:39:126,42,0,543,42,543:255,42,0:0,0:8.8137e+01,3.9137e+01,5.2992e-04,4.5000e+02,7.3907e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,7:0,0,8,6 chr2 110855124 . C . PASS END=110855146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 110855147 . G . PASS END=110855148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 110855149 . T . PASS END=110855152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 110855153 . G . PASS END=110855160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:10:0,27,405:0,30,255:9,0 chr2 110855161 . C . PASS END=110855178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 110855179 . G . PASS END=110855181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 110873265 . C . PASS END=110873268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr2 110873269 . T . PASS END=110873269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 110873270 . C . PASS END=110873294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1056:0,87,255:29,0 chr2 110873295 . G . PASS END=110873295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 110873296 . G . PASS END=110873301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 110873302 . A . PASS END=110873338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,990:0,65,255:26,0 chr2 110873339 . A . PASS END=110873339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:22,0 chr2 110873340 . G . PASS END=110873352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 110873353 . G . PASS END=110873358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:22:0,45,675:0,50,255:19,0 chr2 110873359 . G . PASS END=110873363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 110873364 . G . PASS END=110873364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:14,0 chr2 110873365 . G . LowGQ END=110873365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,690:11,0,255:14,0 chr2 110873366 . C . PASS END=110873367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,623:0,21,255:14,0 chr2 110873368 . A . PASS END=110873369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:14,0 chr2 110875594 . C . PASS END=110875602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,188,255:40,0 chr2 110875603 . A . PASS END=110875646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:80:0,120,1800:0,150,255:40,1 chr2 110875647 . CTT CT,C,CTTT, 11.60 PASS DP=80;MQ=250.00;MQRankSum=7.555;ReadPosRankSum=0.171;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/3:43,11,3,21,0:0.141,0.038,0.269,0.000:78:25,6,2,12,0:18,5,1,9,0:12:21,87,137,165,569,215,0,137,292,50,96,308,456,186,302:255,0,255:40,53:1.1596e+01,8.7231e+01,1.4023e+02,1.6537e+02,4.5000e+02,2.1837e+02,3.1171e-01,1.4708e+02,3.0263e+02,5.3312e+01,1.2076e+02,3.4271e+02,4.5000e+02,2.2092e+02,3.3053e+02:0.00,10.00,13.00,10.00,20.00,13.00,10.00,20.00,20.00,13.00,34.77,44.77,44.77,44.77,37.77:17,26,15,20:21,22,12,23 chr2 110875648 . T . LowGQ END=110875649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,38:90:0:85:0,0,469:255,0,255:40,23 chr2 110875650 . T . PASS END=110875686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,3:80:83:71:0,83,1800:0,83,255:40,2 chr2 110881029 . G . PASS END=110881029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 110881046 . T . PASS END=110881046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 110881118 . G . PASS END=110881118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:72:0,120,1800:0,183,255:40,0 chr2 110881130 . A . PASS END=110881130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 110881169 . T . PASS END=110881169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 110881174 . A . PASS END=110881174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 110881367 . G . PASS END=110881377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1028:0,90,255:30,0 chr2 110881378 . T . PASS END=110881379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr2 110881380 . C . PASS END=110881550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1106:0,80,255:40,0 chr2 110881551 . G . PASS END=110881551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:32,0 chr2 110881552 . A . PASS END=110881559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,92,255:30,0 chr2 110881560 . T . PASS END=110881580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,900:0,63,255:24,0 chr2 110881581 . T . PASS END=110881593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr2 110881594 . T . PASS END=110881596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:13,0 chr2 110881597 . T . PASS END=110881600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 110881601 . A . PASS END=110881601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:14,0 chr2 110881602 . A . PASS END=110881602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:15,0 chr2 110881603 . A . PASS END=110881603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,504:0,10,255:13,0 chr2 110881604 . C . PASS END=110881620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,513:0,44,255:15,0 chr2 110881621 . T . PASS END=110881621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 110881622 . T . PASS END=110881626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 110881627 . A . PASS END=110881627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 110881628 . A . LowGQ END=110881628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,394:10,0,255:11,0 chr2 110881629 . C . PASS END=110881639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 110881640 . T . PASS END=110881640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 110882042 . T . PASS END=110882155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,111,1544:0,116,255:40,0 chr2 110882769 . T . PASS END=110882860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,172,255:40,0 chr2 110882861 . A . LowGQ END=110882862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:0:65:0,0,1997:0,0,255:40,8 chr2 110882863 . T . PASS END=110882900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:98:46:0,98,1755:0,98,255:40,0 chr2 110883190 . T . PASS END=110883258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:77:0,120,1800:0,210,255:40,0 chr2 110883263 . A . PASS END=110883263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr2 110886748 . A . PASS END=110886748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 110886756 . T . PASS END=110886756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:31,0 chr2 110886762 . C . PASS END=110886828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1259:0,95,255:40,0 chr2 110886829 . A . PASS END=110886829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:29,0 chr2 110886830 . A . PASS END=110886836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr2 110886838 . T . PASS END=110886838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 110886839 . G . PASS END=110886839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 110889256 . C . PASS END=110889368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,2:98:99:66:0,120,1800:0,172,255:40,0 chr2 110889372 . T . PASS END=110889372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 110889377 . G . PASS END=110889377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 110901119 . C . PASS END=110901218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,114,1710:0,129,255:40,0 chr2 110901226 . G . PASS END=110901226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 110902061 . G . PASS END=110902061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 110902063 . G . PASS END=110902063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 110902070 . C . PASS END=110902146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:67:0,120,1800:0,172,255:40,1 chr2 110904328 . A . PASS END=110904328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 110904330 . T . PASS END=110904412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,117,1755:0,131,255:40,0 chr2 110904416 . G . PASS END=110904416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 110905493 . A . PASS END=110905603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:69:0,120,1800:0,190,255:40,0 chr2 110907359 . C . PASS END=110907430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,131,255:40,0 chr2 110907759 . C . PASS END=110907833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:60:0,120,1800:0,145,255:40,0 chr2 110913945 . C . PASS END=110913960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr2 110913961 . G . PASS END=110913965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 110913966 . C . PASS END=110913990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 110913991 . T . PASS END=110913991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 110913992 . C . PASS END=110913992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 110913993 . C . PASS END=110913993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 110913994 . A . PASS END=110913998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 110913999 . A . PASS END=110913999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 110914000 . C . PASS END=110914014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr2 110914015 . T . PASS END=110914024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 110914025 . T . PASS END=110914058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,466:0,39,255:13,0 chr2 110917704 . C . PASS END=110917832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:47:0,117,1755:0,124,255:40,0 chr2 110919175 . C . PASS END=110919175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 110919180 . A . PASS END=110919274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,128,255:40,0 chr2 110920625 . C . PASS END=110920712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,108,1549:0,110,255:40,0 chr2 110920717 . A . PASS END=110920717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 110920721 . A . PASS END=110920721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 110922087 . G . PASS END=110922087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr2 110922096 . C . PASS END=110922098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 110922099 . G . PASS END=110922099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 110922100 . G . PASS END=110922105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1005:0,90,255:30,0 chr2 110922106 . A . PASS END=110922106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr2 110922107 . G . PASS END=110922110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:36,0 chr2 110922111 . T . PASS END=110922307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:37:0,87,1272:0,90,255:40,0 chr2 110922620 . C . PASS END=110922620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,181,255:40,0 chr2 110922629 . C . PASS END=110922665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,136,255:40,0 chr2 110922666 . C . PASS END=110922702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,144,255:40,0 chr2 110922703 . C T, 217.64 PASS DP=58;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,25,0:0,32,0:168:255,171,0,2141,171,2141:255,171,0:0,0:2.1764e+02,1.6764e+02,0.0000e+00,4.5000e+02,2.0241e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,34:0,0,35,22 chr2 110922704 . T . PASS END=110922732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,117,1755:0,127,255:40,0 chr2 110922734 . T . PASS END=110922734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 110926029 . C . PASS END=110926130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:60:0,120,1800:0,140,255:40,0 chr2 110927383 . C . PASS END=110927462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:66:0,120,1800:0,190,255:40,0 chr2 110927463 . A . PASS END=110927463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,15:102:34:102:0,34,2490:0,34,255:40,0 chr2 110927464 . T . PASS END=110927575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:50:0,114,1710:0,133,255:40,0 chr2 110927579 . C . PASS END=110927579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,102,1530:0,132,255:34,0 chr2 110927584 . A . PASS END=110927584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr2 110935963 . T . PASS END=110936124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:87:51:0,87,1563:0,87,255:40,0 chr2 110936127 . A . PASS END=110936127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,99,1485:0,150,255:33,0 chr2 110937201 . T . PASS END=110937261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:78:0,120,1800:0,229,255:40,0 chr2 110958998 . C . PASS END=110959071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:75:0,120,1800:0,209,255:40,0 chr2 110959982 . T . PASS END=110959990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1410:0,98,255:37,0 chr2 110959991 . C . PASS END=110959991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr2 110959992 . T . PASS END=110960056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1350:0,84,255:40,0 chr2 110962477 . C . PASS END=110962477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:24,0 chr2 110962478 . T . PASS END=110962478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 110962479 . G . PASS END=110962479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 110962480 . T . PASS END=110962491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,858:0,75,255:25,0 chr2 110962492 . C . PASS END=110962492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:24,0 chr2 110962493 . T . PASS END=110962494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,846:0,75,255:25,0 chr2 110962495 . A . PASS END=110962495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 110962496 . T . PASS END=110962498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,842:0,75,255:25,0 chr2 110962499 . C . PASS END=110962499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,698:0,25,255:20,0 chr2 110962500 . G . PASS END=110962500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 110962501 . G . PASS END=110962501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr2 110962502 . C . PASS END=110962508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr2 110962509 . G . PASS END=110962509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 110962510 . G . PASS END=110962516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:21,0 chr2 110962517 . A . PASS END=110962517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:19,0 chr2 110962518 . G . PASS END=110962518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 110962519 . A . PASS END=110962520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:20,0 chr2 110962521 . G . PASS END=110962528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 110962529 . T . PASS END=110962529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr2 110962530 . G . PASS END=110962531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 110962532 . C . PASS END=110962532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 110962533 . G . PASS END=110962541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 110962542 . G . PASS END=110962542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 110962543 . C . PASS END=110962543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 110962544 . A . PASS END=110962544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 110962545 . T . PASS END=110962545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 110969932 . T . PASS END=110969936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 110969937 . C . PASS END=110969937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 110969938 . C . PASS END=110969939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr2 110969940 . G . PASS END=110969949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:17,0 chr2 110969950 . C . PASS END=110969950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 110969951 . T . PASS END=110969964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,652:0,54,255:19,0 chr2 110969965 . C . PASS END=110969965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:15,0 chr2 110969966 . A . PASS END=110970030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:18,0 chr2 110970031 . G . PASS END=110970076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr2 110970077 . A . PASS END=110970077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 110970078 . G . PASS END=110970078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 110970079 . T . PASS END=110970079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr2 110970080 . G . PASS END=110970080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 110970081 . T . PASS END=110970081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,798:0,38,255:20,0 chr2 110970082 . C . PASS END=110970121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:24,0 chr2 110970122 . C . PASS END=110970122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr2 110970123 . G . PASS END=110970125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 110970126 . G . PASS END=110970147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:28,0 chr2 110970148 . C . PASS END=110970148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,2 chr2 110970149 . A . PASS END=110970149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,938:0,21,255:27,2 chr2 110970150 . A . PASS END=110970150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:28,0 chr2 110970151 . A . PASS END=110970159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:30,0 chr2 110970160 . C . PASS END=110970160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 110970161 . G . PASS END=110970177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1125:0,80,255:30,0 chr2 110970178 . G . PASS END=110970178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr2 110970179 . T . PASS END=110970180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 110970181 . A . PASS END=110970181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 110970182 . G . PASS END=110970192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,881:0,81,255:29,0 chr2 110970193 . A . PASS END=110970193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 110970194 . G . PASS END=110970205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 110970206 . A . PASS END=110970206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1100:0,41,255:27,0 chr2 110970207 . G . PASS END=110970217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:31,0 chr2 110970218 . T . PASS END=110970218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1004:0,79,255:31,0 chr2 110970219 . C . PASS END=110970348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:86:33:0,86,1210:0,86,255:40,0 chr2 111101590 . A . LowDepth END=111101604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:1,0 chr2 111101605 . G . LowDepth END=111101626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr2 111103395 . G . LowDepth;LowGQ END=111103565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111103673 . G . LowDepth;LowGQ END=111103897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111104236 . G . LowDepth;LowGQ END=111104366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111144863 . T . PASS END=111144907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:29,0 chr2 111144908 . A . PASS END=111144930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 111144931 . T . PASS END=111144943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr2 111144944 . T . PASS END=111144955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr2 111144956 . C . PASS END=111144967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:11:0,21,315:0,23,255:8,0 chr2 111144968 . A . PASS END=111144970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 111144971 . A . PASS END=111144974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 111146440 . T . LowDepth;LowGQ END=111146466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111147327 . C . PASS END=111147356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,106,1305:0,106,255:40,0 chr2 111148337 . C . PASS END=111148346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,834:0,78,255:26,0 chr2 111148347 . G . PASS END=111148353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr2 111148354 . G . PASS END=111148354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 111148355 . T . PASS END=111148362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,966:0,84,255:29,0 chr2 111148363 . G . PASS END=111148363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 111148364 . G . PASS END=111148382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1025:0,87,255:29,0 chr2 111148383 . C . PASS END=111148402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr2 111148403 . C . PASS END=111148421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,676:0,43,255:19,0 chr2 111204316 . T . LowDepth;LowGQ END=111204463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111204662 . T . LowDepth;LowGQ END=111204678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111204679 . G . LowGQ END=111204737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,22:0,0,33:2,0 chr2 111207396 . C . LowDepth;LowGQ END=111207444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111208738 . C . LowDepth;LowGQ END=111208830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111209441 . C . LowDepth;LowGQ END=111209595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111212428 . C . LowDepth;LowGQ END=111212577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111213012 . C . LowDepth;LowGQ END=111213132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111214607 . C . LowDepth;LowGQ END=111214673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111223193 . T . LowDepth;LowGQ END=111223204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111225672 . C . LowDepth;LowGQ END=111225831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111230174 . A . LowDepth;LowGQ END=111230355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111273188 . T . LowDepth;LowGQ END=111273222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111281065 . T . LowDepth;LowGQ END=111281274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111283842 . C . LowDepth;LowGQ END=111283981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111285231 . C . LowDepth;LowGQ END=111285658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111290047 . T . LowDepth;LowGQ END=111290150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111291042 . C . LowDepth;LowGQ END=111293265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111293993 . C . LowDepth;LowGQ END=111294087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111296121 . T . LowDepth;LowGQ END=111296233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111297632 . C . LowDepth;LowGQ END=111297767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111300936 . C . LowDepth;LowGQ END=111301019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111301113 . C . LowDepth;LowGQ END=111301292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111302237 . T . LowDepth;LowGQ END=111302383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111302646 . C . LowDepth;LowGQ END=111302783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111303050 . C . LowDepth;LowGQ END=111303208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111304131 . C . LowDepth;LowGQ END=111304254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111304422 . A . LowDepth;LowGQ END=111304597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111304681 . T . LowDepth;LowGQ END=111304862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111306970 . C . LowDepth;LowGQ END=111307179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111309301 . C . LowDepth;LowGQ END=111309388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111315429 . C . LowDepth;LowGQ END=111315624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111320189 . C . LowDepth;LowGQ END=111320334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111320680 . C . LowDepth;LowGQ END=111320910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111324953 . C . LowDepth;LowGQ END=111325105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111325541 . C . LowDepth;LowGQ END=111325652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111327234 . T . LowDepth;LowGQ END=111327301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111334530 . C . PASS END=111334530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 111334531 . T . LowGQ END=111334532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,132:4,0 chr2 111334533 . T . PASS END=111334534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 111334535 . G . LowGQ END=111334535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 111334536 . A . PASS END=111334536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,178:0,15,178:5,0 chr2 111334537 . G . LowGQ END=111334537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 111334538 . G . PASS END=111334539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr2 111334540 . G . LowGQ END=111334540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 111334541 . A . PASS END=111334542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:5,0 chr2 111334543 . G . LowGQ END=111334543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:24,0,132:4,0 chr2 111334544 . G . PASS END=111334546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 111334547 . T . LowGQ END=111334547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 111334548 . G . PASS END=111334548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 111334549 . A . LowGQ END=111334549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:24,0,118:4,0 chr2 111334550 . G . PASS END=111334550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 111334551 . A . LowGQ END=111334551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,110:4,0 chr2 111334552 . C . PASS END=111334553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 111334554 . C . LowGQ END=111334554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 111334555 . A . PASS END=111334555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:5,0 chr2 111334556 . G . LowGQ END=111334556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr2 111334557 . C . PASS END=111334559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 111334560 . C . LowGQ END=111334562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,100:2,0,124:4,0 chr2 111334563 . G . PASS END=111334567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 111334568 . C . LowGQ END=111334568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 111334569 . G . PASS END=111334571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 111334572 . C . LowGQ END=111334573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 111334574 . G . PASS END=111334576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr2 111334577 . C . LowGQ END=111334577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 111334578 . C . PASS END=111334581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr2 111334582 . T . LowGQ END=111334585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:2,0,118:4,0 chr2 111334586 . C . PASS END=111334587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr2 111334588 . T . LowGQ END=111334588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr2 111334589 . T . PASS END=111334589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr2 111334590 . G . LowGQ END=111334590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:24,0,132:4,0 chr2 111334591 . C . PASS END=111334591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 111334592 . T . LowGQ END=111334592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr2 111334593 . G . PASS END=111334593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,178:4,0 chr2 111334594 . C . LowGQ END=111334594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 111334595 . G . PASS END=111334597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr2 111334598 . T . LowGQ END=111334598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 111334599 . C . PASS END=111334600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 111334601 . T . LowGQ END=111334601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 111368292 . C . PASS END=111368304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 111368305 . G . PASS END=111368305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 111368306 . G . PASS END=111368308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 111368309 . C . PASS END=111368309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,161:0,1,161:5,0 chr2 111368310 . C . PASS END=111368312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,194:0,18,194:6,0 chr2 111368313 . T . PASS END=111368323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:8,0 chr2 111368324 . G . PASS END=111368329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 111368330 . G . PASS END=111368331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 111368332 . C . PASS END=111368343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:8,0 chr2 111368344 . T . PASS END=111368361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:5,0 chr2 111368362 . T . PASS END=111368365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:6:8:0,6,90:0,24,255:2,0 chr2 111368366 . C CGCCGCCGCT, 57.84 PASS DP=8;MQ=74.06;FractionInformativeReads=0.750 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,6,0:1.000,0.000:6:0,3,0:0,3,0:13:90,16,0,215,16,216:84,0,162:0,5:5.7843e+01,1.3218e+01,2.1217e-01,2.1812e+02,4.8267e+01,2.2168e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,1,5:0,0,4,2 chr2 111368367 . G . LowGQ END=111368382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:0:8:0,0,55:0,0,148:3,1 chr2 111368383 . C . PASS END=111368383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr2 111368384 . T . LowGQ END=111368385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:7:0,0,186:15,0,204:5,1 chr2 111368386 . C . PASS END=111368392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 111368393 . C . LowGQ END=111368393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,139:34,0,173:5,0 chr2 111368394 . G . PASS END=111368399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:5,0 chr2 111368400 . G . LowGQ END=111368411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,1:6:0:2:0,0,0:0,0,33:1,0 chr2 111368412 . G . LowDepth;LowGQ END=111368450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 111395541 . T . PASS END=111395736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:96:33:0,96,1225:0,99,255:40,0 chr2 111397319 . C . PASS END=111397425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:80:0,120,1800:0,210,255:40,0 chr2 111398611 . C . PASS END=111398611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr2 111398612 . T . PASS END=111398612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:33,0 chr2 111398613 . G . PASS END=111398613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:32,0 chr2 111398614 . G . PASS END=111398630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1278:0,89,255:38,0 chr2 111398631 . T . PASS END=111398631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,0 chr2 111398632 . G . PASS END=111398782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,100,1493:0,100,255:40,0 chr2 111398884 . C . PASS END=111399041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:53:0,120,1800:0,149,255:40,0 chr2 111399219 . T . PASS END=111399421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:42:0,110,1474:0,110,255:40,0 chr2 111399696 . C . PASS END=111399811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:59:0,120,1800:0,159,255:40,0 chr2 111406811 . C . PASS END=111406919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,4:88:99:68:0,120,1800:0,167,255:40,0 chr2 111406920 . C . PASS END=111406954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:64:0,111,1665:0,145,255:40,0 chr2 111408123 . T . PASS END=111408129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 111408130 . A . PASS END=111408141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:24,0 chr2 111408142 . A . PASS END=111408142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 111408143 . A . PASS END=111408161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:26,0 chr2 111408162 . A . PASS END=111408163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 111408164 . T . PASS END=111408178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 111408179 . G . PASS END=111408183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 111408184 . A . PASS END=111408185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 111408186 . C . PASS END=111408194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 111408195 . G . PASS END=111408195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 111408196 . A . PASS END=111408197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 111408198 . C . PASS END=111408250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr2 111408251 . T . PASS END=111408251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,739:0,30,255:22,0 chr2 111408252 . C . PASS END=111408266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:23:0,65,970:0,65,255:26,0 chr2 111408267 . G . PASS END=111408270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 111408271 . C . PASS END=111408294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,68,255:25,0 chr2 111408295 . A . PASS END=111408295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 111408296 . C . PASS END=111408305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 111408306 . A . PASS END=111408306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 111408307 . T . PASS END=111408313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 111408314 . T . PASS END=111408319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 111408320 . T . PASS END=111408320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr2 111408321 . G . PASS END=111408357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,585:0,47,255:19,0 chr2 111408358 . T . PASS END=111408361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 111411013 . C . PASS END=111411100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:57:0,120,1800:0,143,255:40,0 chr2 111413316 . C . PASS END=111413317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,862:0,75,255:25,0 chr2 111413318 . T . PASS END=111413318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 111413319 . T . PASS END=111413321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,872:0,75,255:26,0 chr2 111413322 . C . PASS END=111413326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 111413327 . A . PASS END=111413327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 111413328 . A . PASS END=111413337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1033:0,84,255:31,0 chr2 111413338 . T . PASS END=111413338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,994:0,60,255:28,0 chr2 111413339 . G . PASS END=111413425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1177:0,80,255:40,0 chr2 111413426 . G . PASS END=111413426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:38,0 chr2 111413427 . T . PASS END=111413449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1260:0,94,255:39,0 chr2 111413450 . A . PASS END=111413450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:35:0,78,1170:0,89,255:25,0 chr2 111413451 . C . PASS END=111413454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,88,255:27,0 chr2 111413455 . T . PASS END=111413463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:28:0,78,1170:0,84,255:26,0 chr2 111413464 . C . PASS END=111413467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 111413468 . A . PASS END=111413472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 111413473 . T . PASS END=111413473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,910:0,50,255:23,0 chr2 111413474 . T . PASS END=111413493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,933:0,67,255:25,0 chr2 111414613 . C . PASS END=111414694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,129,255:40,0 chr2 111415123 . C . PASS END=111415222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:49:0,120,1800:0,135,255:40,0 chr2 111415987 . T . PASS END=111416097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:64:0,120,1800:0,191,255:40,0 chr2 111416191 . C . PASS END=111416318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1215:0,88,255:40,0 chr2 111416319 . C . PASS END=111416319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:25,0 chr2 111417555 . C . PASS END=111417613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,121,255:40,0 chr2 111419159 . C . PASS END=111419173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,790:0,63,255:22,0 chr2 111419174 . G . PASS END=111419174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 111419175 . C . PASS END=111419192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,837:0,69,255:25,0 chr2 111419193 . C . PASS END=111419229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1015:0,81,255:34,0 chr2 111419230 . A . PASS END=111419230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:32,0 chr2 111419231 . A . PASS END=111419241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1332:0,92,255:35,0 chr2 111419242 . G . PASS END=111419242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr2 111419243 . G . PASS END=111419302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1257:0,89,255:40,0 chr2 111419303 . G . PASS END=111419303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr2 111419304 . C . PASS END=111419323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:30:0,85,1096:0,85,255:32,0 chr2 111419324 . A . PASS END=111419338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,990:0,72,255:24,0 chr2 111419339 . T . PASS END=111419339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 111419340 . G . PASS END=111419349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:23,0 chr2 111419350 . T . PASS END=111419375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 111419376 . C . PASS END=111419382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 111419383 . G . PASS END=111419394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:17,0 chr2 111419395 . T . PASS END=111419418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 111423840 . C . PASS END=111423991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:37:0,99,1485:0,103,255:40,0 chr2 111425098 . C . PASS END=111425282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,100,1634:0,100,255:40,0 chr2 111425374 . A . PASS END=111425426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,141,255:40,0 chr2 111427030 . C . PASS END=111427130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:71:0,120,1800:0,197,255:40,0 chr2 111428102 . C . PASS END=111428145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,191,255:40,0 chr2 111430237 . C . PASS END=111430239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,740:0,66,255:22,0 chr2 111430240 . G . PASS END=111430242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 111430243 . T . PASS END=111430243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 111430244 . T . PASS END=111430245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,958:0,81,255:30,0 chr2 111430246 . T . PASS END=111430246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 111430247 . T . PASS END=111430258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 111430259 . T . PASS END=111430259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 111430260 . C . PASS END=111430404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1213:0,93,255:40,0 chr2 111430405 . A . PASS END=111430405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:27,0 chr2 111430406 . A . PASS END=111430417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1170:0,93,255:31,0 chr2 111430418 . T . PASS END=111430430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:24:0,60,900:0,72,255:24,0 chr2 111430431 . C . PASS END=111430434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 111431663 . A . PASS END=111431801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:88:0,120,1800:0,232,255:40,0 chr2 111431883 . C . PASS END=111431942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,111,1665:0,127,255:40,0 chr2 111435547 . T . PASS END=111435572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,63,255:22,0 chr2 111525967 . A . PASS END=111525972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,127,255:40,0 chr2 111525973 . G . PASS END=111525973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1500:0,77,255:40,0 chr2 111525974 . C . PASS END=111526041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,115,1607:0,115,255:40,0 chr2 111538587 . A . PASS END=111538598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:85:44:0,85,1461:0,85,255:40,0 chr2 111538599 . T . PASS END=111538599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1557:0,77,255:40,0 chr2 111538600 . C . PASS END=111538602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1539:0,93,255:40,0 chr2 111538603 . T . PASS END=111538603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1520:0,77,255:40,0 chr2 111538604 . C . PASS END=111538649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,103,1381:0,103,255:40,0 chr2 111542309 . G . PASS END=111542314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1189:0,99,255:33,0 chr2 111542315 . A . PASS END=111542315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1028:0,60,255:32,0 chr2 111542316 . A . PASS END=111542388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1212:0,95,255:39,0 chr2 111542389 . G . PASS END=111542389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr2 111542390 . A . PASS END=111542392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1166:0,85,255:29,0 chr2 111551227 . T . PASS END=111551313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,164,255:40,0 chr2 111551653 . G . PASS END=111551751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:35:0,84,1240:0,92,255:40,0 chr2 111556187 . G . PASS END=111556301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,140,255:40,0 chr2 111556591 . G . PASS END=111556666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,111,1665:0,115,255:40,0 chr2 111556667 . G . PASS END=111556667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1261:0,68,255:33,0 chr2 111556668 . T . PASS END=111556677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:39:0,105,1575:0,113,255:37,0 chr2 111559229 . G . PASS END=111559232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 111559233 . G . PASS END=111559233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:39,0 chr2 111559234 . C . PASS END=111559301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:44:0,107,1800:0,107,255:40,0 chr2 111562840 . G . PASS END=111562957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1142:0,83,255:40,0 chr2 111562958 . A . PASS END=111562958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr2 111562959 . T . PASS END=111562966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 111562967 . A . PASS END=111562967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1006:0,35,255:24,0 chr2 111562968 . T . PASS END=111562969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr2 111562970 . A . PASS END=111562970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 111562971 . A . PASS END=111562971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:26,0 chr2 111562972 . G . PASS END=111562972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 111597477 . A . PASS END=111597498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,201,255:40,0 chr2 111597499 . A . PASS END=111597500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr2 111598948 . C . PASS END=111598982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:93:0,120,1800:0,243,255:40,0 chr2 111644358 . G . PASS END=111644409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,108,1715:0,108,255:40,0 chr2 111666366 . C . PASS END=111666371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,986:0,78,255:26,0 chr2 111666372 . G . PASS END=111666393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr2 111666394 . G . PASS END=111666394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 111666395 . A . PASS END=111666404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr2 111666405 . G . PASS END=111666405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 111666406 . A . PASS END=111666406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 111666407 . T . PASS END=111666407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 111666408 . C . PASS END=111666418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 111666419 . A . PASS END=111666420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 111666421 . A . PASS END=111666425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 111666426 . G . PASS END=111666453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 111666454 . A . PASS END=111666482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr2 111685635 . G . PASS END=111685651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:19,0 chr2 111685652 . T . PASS END=111685652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 111685653 . C . PASS END=111685653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 111685654 . C . PASS END=111685654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 111685655 . A . PASS END=111685655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:20,0 chr2 111685656 . G . PASS END=111685662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:23,0 chr2 111685663 . T . PASS END=111685663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:23,0 chr2 111685664 . C . PASS END=111685677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,878:0,72,255:26,0 chr2 111685678 . G . PASS END=111685751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,90,255:40,0 chr2 111685752 . T . PASS END=111685788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,112,1462:0,112,255:40,0 chr2 111685789 . C T, 175.48 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,24,0:0,19,0:125:213,128,0,1584,128,1584:255,129,0:0,0:1.7548e+02,1.2548e+02,0.0000e+00,4.5000e+02,1.6025e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,21:0,0,17,26 chr2 111685790 . A . PASS END=111685818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,86,255:39,0 chr2 111685819 . G . PASS END=111685826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,990:0,60,255:25,0 chr2 111685827 . A . PASS END=111685827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:23,0 chr2 111685828 . T . PASS END=111685828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:22,0 chr2 111685829 . T . PASS END=111685835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:23,0 chr2 111685836 . G . PASS END=111685839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 111691066 . G . PASS END=111691078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,892:0,69,255:26,0 chr2 111691079 . C . PASS END=111691117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,973:0,81,255:32,0 chr2 111691118 . A . PASS END=111691129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:28,0 chr2 111691130 . C . PASS END=111691141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 111691142 . G . PASS END=111691156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr2 111691157 . G . PASS END=111691189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 111691190 . C . PASS END=111691196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 111691197 . G . PASS END=111691197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 111691198 . C . PASS END=111691202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 111691203 . A . PASS END=111691203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 111691204 . G . PASS END=111691210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 111691211 . G . PASS END=111691215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 111691216 . C . PASS END=111691218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 111691219 . G . PASS END=111691219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 111721201 . G . PASS END=111721290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:57:0,120,1800:0,155,255:40,0 chr2 111744685 . G . PASS END=111744794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:31:0,86,1150:0,86,255:40,0 chr2 111753470 . T . PASS END=111753581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,108,1775:0,108,255:40,0 chr2 111759629 . C . PASS END=111759660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,131,255:40,0 chr2 111759661 . G T, 217.64 PASS DP=57;MQ=249.33;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,29,0:0,28,0:168:255,171,0,2152,171,2152:255,171,0:0,0:2.1764e+02,1.6764e+02,0.0000e+00,4.5000e+02,2.0241e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,34:0,0,29,28 chr2 111759662 . G . PASS END=111759697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,151,255:40,0 chr2 111774089 . G . PASS END=111774115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,173,255:40,0 chr2 111774116 . G A, 262.77 PASS DP=72;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,34,0:0,38,0:213:301,216,0,2709,216,2709:255,219,0:0,0:2.6277e+02,2.1277e+02,0.0000e+00,4.5000e+02,2.4754e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,43:0,0,35,37 chr2 111774117 . T . PASS END=111774121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,203,255:40,0 chr2 111789204 . G . PASS END=111789206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 111789207 . A . PASS END=111789207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:34,0 chr2 111789208 . A . PASS END=111789275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:85:34:0,85,1130:0,85,255:39,0 chr2 111789276 . G . PASS END=111789276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:30,0 chr2 111789277 . C . PASS END=111789291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:31,0 chr2 111795579 . A . PASS END=111795589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:72:0,120,1800:0,206,255:40,0 chr2 111806795 . T . PASS END=111806865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,111,1724:0,111,255:40,0 chr2 111850442 . T . PASS END=111850543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,100,1285:0,100,255:40,0 chr2 111851064 . G . PASS END=111851075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:83:0,120,1800:0,193,255:40,0 chr2 111861630 . G . PASS END=111861656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:99:0,120,1800:0,255,255:40,0 chr2 111871685 . G . PASS END=111871747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,120,1800:0,135,255:40,0 chr2 111874522 . T . PASS END=111874525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 111874526 . T . PASS END=111874583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,759:0,60,255:26,0 chr2 111874584 . T . PASS END=111874584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 111874585 . T . PASS END=111874611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,884:0,66,255:23,0 chr2 111874612 . T . PASS END=111874614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,53,255:16,0 chr2 111875193 . T . PASS END=111875196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 111875197 . T . PASS END=111875197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 111875198 . G . PASS END=111875214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,760:0,60,255:22,0 chr2 111875215 . T . PASS END=111875215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 111875216 . G . PASS END=111875221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:24,0 chr2 111875222 . T . PASS END=111875222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 111875223 . G . PASS END=111875273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr2 111875274 . G . PASS END=111875274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr2 111875275 . C . PASS END=111875279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 111875280 . A . PASS END=111875280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,722:0,38,255:22,0 chr2 111875281 . T . PASS END=111875300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,809:0,69,255:23,0 chr2 111875301 . C . PASS END=111875312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,47,255:19,0 chr2 111875313 . G . PASS END=111875316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:36:21:0,36,540:0,63,255:13,0 chr2 111875317 . T . PASS END=111875317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:27:21:0,27,405:0,63,255:9,0 chr2 111875318 . C . PASS END=111875331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr2 111875332 . T . PASS END=111875332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 111875333 . G . PASS END=111875339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 111875340 . C . PASS END=111875341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 111875342 . G . PASS END=111875343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 111875344 . C . PASS END=111875352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr2 111875353 . A . PASS END=111875388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,172:0,15,172:6,0 chr2 111875389 . T . LowGQ END=111875389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,108:2,0,110:4,0 chr2 111875390 . C . PASS END=111875393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 111879381 . C . PASS END=111879381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 111880232 . A . PASS END=111880263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 111880264 . G . PASS END=111880283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 111880284 . G . PASS END=111880306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr2 111880307 . C . PASS END=111880324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,70:0,6,70:3,0 chr2 111880325 . G . PASS END=111880344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr2 111880345 . T . LowGQ END=111880348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:6,0 chr2 111880349 . C . PASS END=111880359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 111880360 . G . PASS END=111880381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 111880382 . C . PASS END=111880390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 111880391 . T . PASS END=111880474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr2 111880475 . C . LowGQ END=111880500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,0:4:0:1:0,0,0:0,3,39:3,0 chr2 111881310 . A . PASS END=111881317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1253:0,103,255:40,0 chr2 111881318 . A . PASS END=111881318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:53:41:0,53,1261:0,53,255:39,0 chr2 111881319 . C . PASS END=111881398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1260:0,87,255:40,0 chr2 111881399 . C . PASS END=111881468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,798:0,66,255:26,0 chr2 111881469 . A . PASS END=111881469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 111881470 . G . PASS END=111881477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 111881478 . G . PASS END=111881478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 111881479 . G . PASS END=111881486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 111881487 . C . PASS END=111881487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 111881488 . C . PASS END=111881512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:24,0 chr2 111881513 . T . PASS END=111881513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 111881514 . G . PASS END=111881538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,970:0,75,255:26,0 chr2 111881539 . T . PASS END=111881546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 111881547 . C . PASS END=111881547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 111881548 . A . PASS END=111881549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:29,0 chr2 111881550 . A . PASS END=111881550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 111881551 . T . PASS END=111881556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr2 111881557 . C . PASS END=111881557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 111881558 . T . PASS END=111881700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:30:0,80,1082:0,80,255:40,0 chr2 111881701 . T . PASS END=111881701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1402:0,79,255:33,0 chr2 111881702 . A . PASS END=111881711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,99,1485:0,108,255:36,0 chr2 111881712 . A . PASS END=111881716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:35:0,75,1125:0,91,255:25,0 chr2 111886204 . T . PASS END=111886228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,4:66:99:52:0,101,1740:0,101,255:40,0 chr2 111886229 . T . PASS END=111886328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:47:0,120,1800:0,125,255:40,0 chr2 111899890 . A . PASS END=111899968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,101,1800:0,101,255:40,0 chr2 111902065 . C . PASS END=111902078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,144,255:40,0 chr2 111907621 . C . PASS END=111907636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1040:0,84,255:31,0 chr2 111907637 . T . PASS END=111907637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 111907638 . G . PASS END=111907640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 111907641 . C . PASS END=111907641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 111907642 . C . PASS END=111907649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1217:0,96,255:34,0 chr2 111907650 . A . PASS END=111907650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1172:0,71,255:33,0 chr2 111907651 . T . PASS END=111907674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1235:0,84,255:35,0 chr2 111907675 . A . PASS END=111907676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:33,0 chr2 111907677 . G . PASS END=111907812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1172:0,80,255:40,0 chr2 111907813 . A . PASS END=111907847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:25,0 chr2 111909399 . C . PASS END=111909428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:67:0,120,1800:0,146,255:40,0 chr2 111911357 . T . PASS END=111911385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,152,255:40,0 chr2 111918996 . A . PASS END=111919016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:42:0,93,1467:0,93,255:40,0 chr2 111921710 . G . PASS END=111921717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1352:0,81,255:39,0 chr2 111921718 . G . PASS END=111921718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1332:0,70,255:36,0 chr2 111921719 . A . PASS END=111921720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1368:0,81,255:38,1 chr2 111921721 . T . PASS END=111921721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:52:40:0,52,1270:0,52,255:37,1 chr2 111921722 . A . PASS END=111921726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1389:0,104,255:38,0 chr2 111921727 . C . PASS END=111921727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1236:0,37,255:34,0 chr2 111921728 . C . PASS END=111921730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:40:0,89,1382:0,89,255:37,0 chr2 111921731 . G . PASS END=111921731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1288:0,56,255:36,0 chr2 111921732 . C . PASS END=111921808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,100,1413:0,100,255:40,0 chr2 112524538 . T . PASS END=112524553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr2 112524554 . G . PASS END=112524554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 112524555 . C . PASS END=112524572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 112526868 . T . PASS END=112526874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr2 112526875 . A . PASS END=112526881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 112526882 . G . PASS END=112526896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr2 112526897 . G . PASS END=112526899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr2 112526900 . G . PASS END=112526900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 112526901 . C . PASS END=112526902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 112526903 . A . PASS END=112526921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:25,0 chr2 112526922 . A . PASS END=112526922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 112526923 . G . PASS END=112526934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 112526935 . A . PASS END=112526935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr2 112526936 . T . PASS END=112526951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 112526952 . T . PASS END=112526952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,723:0,52,255:19,0 chr2 112526953 . T . PASS END=112526955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 112526956 . A . PASS END=112526963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:20:0,42,630:0,43,255:17,0 chr2 112526964 . T . PASS END=112526975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:30:12:0,30,450:0,36,255:12,0 chr2 112526976 . T . LowGQ END=112526976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:9,0 chr2 112526977 . G . PASS END=112526978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 112526979 . G . PASS END=112526983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 112529918 . C . PASS END=112529950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,584:0,48,255:17,0 chr2 112529951 . C . PASS END=112529954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 112529955 . C . PASS END=112529988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,668:0,48,255:19,0 chr2 112529989 . C . PASS END=112529989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 112529990 . T . PASS END=112530021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr2 112530022 . A . PASS END=112530026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 112530027 . G . PASS END=112530027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:11,0 chr2 112530028 . G . PASS END=112530042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 112530043 . T . PASS END=112530052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr2 112534436 . C . PASS END=112534457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:6,0 chr2 112534458 . A . PASS END=112534474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,205:0,21,205:8,0 chr2 112534475 . T . PASS END=112534539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,303:0,30,255:11,0 chr2 112534540 . T . PASS END=112534540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:10,0 chr2 112534541 . G . PASS END=112534542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 112534543 . T . PASS END=112534558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,296:0,27,255:9,0 chr2 112534559 . A . PASS END=112534559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 112534560 . A . PASS END=112534561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 112534562 . A . PASS END=112534562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,239:0,10,239:8,0 chr2 112534563 . C . PASS END=112534563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 112534564 . T . LowGQ END=112534564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:1,0,255:9,0 chr2 112534565 . C . PASS END=112534567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 112534568 . A . PASS END=112534575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 112534576 . T . PASS END=112534576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 112534577 . T . PASS END=112534584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 112534585 . C . LowGQ END=112534585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:12,0,253:8,0 chr2 112534586 . A . PASS END=112534586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 112534587 . A . PASS END=112534587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:7,0 chr2 112534588 . A . PASS END=112534592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 112534593 . A . LowGQ END=112534593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,224:20,0,244:6,0 chr2 112534594 . G . PASS END=112534594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 112534595 . A . PASS END=112534604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,249:6,0 chr2 112534605 . C . PASS END=112534605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:4,0 chr2 112534606 . A . PASS END=112534611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,156:4,0 chr2 112534612 . C . PASS END=112534634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,47:0,6,47:2,0 chr2 112536252 . C . PASS END=112536258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 112536259 . A . PASS END=112536263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:19,0 chr2 112536264 . G T, 85.51 PASS DP=19;MQ=31.27;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,8,0:0,10,0:51:123,54,0,691,54,691:255,57,0:0,0:8.5507e+01,5.1174e+01,3.3134e-05,4.5000e+02,8.5944e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,1:0,0,9,9 chr2 112536265 . A . PASS END=112536274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,792:0,63,255:27,0 chr2 112536275 . G . PASS END=112536279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1086:0,87,255:32,0 chr2 112536280 . A . PASS END=112536280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 112536281 . T . PASS END=112536301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,102,1154:0,102,255:38,0 chr2 112536302 . C . PASS END=112536347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1291:0,95,255:38,0 chr2 112537876 . C . PASS END=112537925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 112537926 . G . PASS END=112537926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 112537927 . T . PASS END=112537958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:6,0 chr2 112537959 . C . PASS END=112537962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,210:3,0 chr2 112539946 . C . PASS END=112539949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 112539950 . A . PASS END=112539950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 112539951 . A . PASS END=112539951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 112539952 . A . PASS END=112539952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 112539953 . G . PASS END=112539955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 112539956 . C . PASS END=112539956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 112539957 . G . PASS END=112539958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 112539959 . G . PASS END=112539959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 112539960 . C . PASS END=112539966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,864:0,61,255:26,0 chr2 112539967 . G . PASS END=112539976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:30,0 chr2 112539977 . G . PASS END=112539977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 112539978 . C . PASS END=112540030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:31:0,90,1253:0,92,255:38,0 chr2 112540031 . A . PASS END=112540031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:31,0 chr2 112540032 . G . PASS END=112540047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:33,0 chr2 112540048 . T . PASS END=112540048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr2 112540049 . T . PASS END=112540053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 112540054 . A . PASS END=112540054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 112540055 . T . PASS END=112540055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 112540056 . A . PASS END=112540056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 112540057 . T . PASS END=112540059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr2 112540060 . A . PASS END=112540061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 112540062 . C . PASS END=112540064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 112540065 . C . PASS END=112540077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:27:0,74,1063:0,74,255:26,0 chr2 112540078 . G . PASS END=112540079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 112540080 . T . PASS END=112540080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:25,0 chr2 112540081 . G . PASS END=112540081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 112540082 . G . PASS END=112540082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 112540083 . A . PASS END=112540084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 112541474 . T . PASS END=112541541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:37:0,87,1234:0,87,255:40,0 chr2 112541900 . C . PASS END=112541977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:54:0,120,1800:0,162,255:40,0 chr2 112542937 . C . PASS END=112542947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,70:0,6,70:3,0 chr2 112542948 . C . PASS END=112543003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr2 112543004 . C . PASS END=112543017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 112543018 . C . PASS END=112543037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,188:0,18,188:6,0 chr2 112543038 . G . PASS END=112543038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 112543039 . A . PASS END=112543039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 112543040 . G . PASS END=112543054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 112545811 . C . PASS END=112545897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,116,1484:0,116,255:40,0 chr2 112549939 . C . PASS END=112549942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,222:0,27,222:9,0 chr2 112549943 . C . PASS END=112549943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 112549944 . T . PASS END=112549952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 112549953 . A . PASS END=112549968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,291:0,30,255:11,0 chr2 112549969 . G . PASS END=112549969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 112549970 . C . PASS END=112549973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 112549974 . G . PASS END=112549974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 112549975 . T . PASS END=112549983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:19,0 chr2 112549984 . A . PASS END=112549984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:17,0 chr2 112549985 . A . PASS END=112549992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,721:0,57,255:19,0 chr2 112549993 . C . PASS END=112550017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,726:0,63,255:24,0 chr2 112550018 . T . PASS END=112550018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 112550019 . C . PASS END=112550020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 112550021 . T . PASS END=112550028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,972:0,81,255:31,0 chr2 112550029 . A . PASS END=112550029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,945:0,79,255:31,0 chr2 112550030 . A . PASS END=112550041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1142:0,96,255:33,0 chr2 112550042 . G . PASS END=112550042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr2 112550043 . C . PASS END=112550062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1195:0,86,255:33,0 chr2 112550063 . A . PASS END=112550063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr2 112550064 . G . PASS END=112550084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:32,0 chr2 112550085 . A . PASS END=112550085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:28,0 chr2 112550086 . G . PASS END=112550106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,935:0,81,255:29,0 chr2 112550107 . C . PASS END=112550127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:25,0 chr2 112550128 . C . PASS END=112550129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr2 112550130 . T . PASS END=112550132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 112551655 . A . PASS END=112551708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,128,255:40,0 chr2 112551810 . C . PASS END=112551900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:41:0,102,1435:0,102,255:40,0 chr2 112552394 . C . PASS END=112552449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,115,1513:0,115,255:40,0 chr2 112552450 . A . PASS END=112552450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:63:47:0,63,1485:0,63,255:40,0 chr2 112552451 . G . PASS END=112552471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,102,1530:0,105,255:40,0 chr2 112557163 . T . PASS END=112557163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 112557164 . C . PASS END=112557166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 112557167 . A . PASS END=112557167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 112557168 . G . PASS END=112557196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,460:0,45,255:15,0 chr2 112557197 . G . PASS END=112557197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 112557198 . T . PASS END=112557228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,460:0,45,255:17,0 chr2 112557229 . G . PASS END=112557229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr2 112557230 . C . PASS END=112557238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 112557239 . C . PASS END=112557239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 112557240 . C . PASS END=112557240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 112557241 . A . PASS END=112557241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 112557242 . A . PASS END=112557242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 112557243 . G . PASS END=112557243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 112557244 . C . PASS END=112557262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:17,0 chr2 112557263 . T . PASS END=112557264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr2 112557265 . A . PASS END=112557265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:10,0 chr2 112557266 . A . PASS END=112557266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 112557267 . T . PASS END=112557274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:14:0,24,360:0,25,255:9,0 chr2 112557275 . A . PASS END=112557275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr2 112557276 . C . PASS END=112557276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 112558374 . T . PASS END=112558415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,972:0,80,255:32,0 chr2 112558416 . A . PASS END=112558416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,944:0,62,255:30,0 chr2 112558417 . T . PASS END=112558418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 112558419 . A . PASS END=112558419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:30,0 chr2 112558420 . T . PASS END=112558420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:30,0 chr2 112558421 . C . PASS END=112558424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 112558425 . C . PASS END=112558425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 112558426 . A . PASS END=112558430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:92:31:0,92,877:0,92,255:31,0 chr2 112558431 . C . PASS END=112558431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 112558432 . A . PASS END=112558436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 112558437 . T . PASS END=112558437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 112558438 . C . PASS END=112558448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1111:0,90,255:30,0 chr2 112560005 . C . PASS END=112560011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 112560012 . A . PASS END=112560013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:17,0 chr2 112560014 . G . PASS END=112560017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr2 112560018 . A . PASS END=112560018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 112560019 . A . PASS END=112560021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr2 112560022 . C . PASS END=112560022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 112560023 . T . PASS END=112560028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:18,0 chr2 112560029 . C . PASS END=112560029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 112560030 . A . PASS END=112560030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 112560031 . C . PASS END=112560031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 112560032 . A . PASS END=112560032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 112560033 . A . PASS END=112560033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 112560034 . A . PASS END=112560047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 112560048 . A . PASS END=112560059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 112560060 . G . PASS END=112560060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 112560061 . C . LowGQ END=112560061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:8,0 chr2 112560062 . T . PASS END=112560068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr2 112560069 . C . PASS END=112560083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 112561025 . C . PASS END=112561049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 112561050 . T . PASS END=112561050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 112561051 . A . PASS END=112561071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,434:0,39,255:13,0 chr2 112561072 . T . PASS END=112561072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr2 112561073 . G . PASS END=112561090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,427:0,36,255:12,0 chr2 112561091 . T . PASS END=112561091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,329:0,22,255:11,0 chr2 112561092 . T . PASS END=112561107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 112561282 . T . PASS END=112561416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1181:0,83,255:40,0 chr2 112563379 . C . PASS END=112563393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,247:0,21,247:7,0 chr2 112563394 . G . PASS END=112563419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,209:0,18,209:6,0 chr2 112563420 . A . PASS END=112563420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 112563421 . G . PASS END=112563470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 112566524 . C . PASS END=112566526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 112566527 . T . PASS END=112566527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr2 112566528 . C . PASS END=112566540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr2 112566541 . A . PASS END=112566743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:28:0,80,1041:0,80,255:40,0 chr2 112566744 . T . PASS END=112566744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1037:0,63,255:27,0 chr2 112566745 . G . PASS END=112566747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:29,0 chr2 112566748 . A . PASS END=112566750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:62:31:0,62,1056:0,62,255:29,0 chr2 112566751 . T . PASS END=112566758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 112572947 . C . LowGQ END=112573133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,16:2,0 chr2 112573134 . A . LowDepth;LowGQ END=112573218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 112576417 . C . PASS END=112576423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,799:0,66,255:22,0 chr2 112576424 . A . PASS END=112576424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr2 112576425 . T . PASS END=112576434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:22:0,65,815:0,65,255:26,0 chr2 112576435 . G . PASS END=112576443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:29,0 chr2 112576444 . A . PASS END=112576444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 112576445 . T . PASS END=112576482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:29:0,83,1102:0,83,255:40,0 chr2 112576483 . A . PASS END=112576483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1345:0,79,255:40,0 chr2 112576484 . C . PASS END=112576521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,118,1461:0,118,255:40,0 chr2 112576522 . A . PASS END=112576522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1450:0,71,255:40,0 chr2 112576523 . C . PASS END=112576535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,111,1729:0,111,255:40,0 chr2 112576978 . T . PASS END=112576981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 112576982 . A . PASS END=112576984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 112576985 . T . PASS END=112576985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 112576986 . A . PASS END=112576994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 112576995 . G . PASS END=112576999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 112578816 . C . PASS END=112578822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,917:0,75,255:26,0 chr2 112578823 . C . PASS END=112578842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,993:0,84,255:28,0 chr2 112578843 . T . PASS END=112578843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 112578844 . G . PASS END=112579014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1018:0,80,255:39,0 chr2 112579015 . C . PASS END=112579035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1078:0,74,255:26,0 chr2 112579036 . T . PASS END=112579036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:24,0 chr2 112579037 . A . PASS END=112579042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 112579999 . A . PASS END=112580004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 112580005 . C . PASS END=112580033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:9,0 chr2 112580034 . G . PASS END=112580045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,426:0,42,255:16,0 chr2 112580046 . C . PASS END=112580046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 112580047 . C . PASS END=112580072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:19,0 chr2 112580073 . C . PASS END=112580073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 112580074 . T . PASS END=112580074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr2 112580075 . T . PASS END=112580096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:24,0 chr2 112580097 . G . PASS END=112580098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 112580099 . T . PASS END=112580100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 112580101 . A . PASS END=112580120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,920:0,84,255:28,0 chr2 112580121 . C . PASS END=112580138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,960:0,68,255:26,0 chr2 112580139 . T . PASS END=112580139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr2 112580140 . T . PASS END=112580142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 112580143 . A . PASS END=112580143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 112580144 . A . PASS END=112580151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 112580152 . A . PASS END=112580152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:23,0 chr2 112580153 . G . PASS END=112580161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,878:0,75,255:25,0 chr2 112580162 . T . PASS END=112580162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,793:0,58,255:24,0 chr2 112580163 . C . PASS END=112580168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,864:0,75,255:25,0 chr2 112580169 . A . PASS END=112580169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:22,0 chr2 112580170 . A . PASS END=112580175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr2 112580176 . T . PASS END=112580176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 112580177 . C . PASS END=112580177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 112582543 . C . PASS END=112582613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:87:0,120,1800:0,228,255:40,0 chr2 112582708 . C . PASS END=112582744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,176,255:40,0 chr2 112582942 . G . PASS END=112582942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 112583354 . C . PASS END=112583432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:51:0,120,1800:0,136,255:40,0 chr2 112588863 . C . PASS END=112589011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:37:0,87,1305:0,95,255:40,2 chr2 112590797 . C . PASS END=112590888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:40:0,90,1443:0,90,255:40,0 chr2 112592181 . C . PASS END=112592221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:98:38:0,98,1441:0,98,255:40,0 chr2 112592222 . T . PASS END=112592222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1631:0,72,255:40,0 chr2 112592223 . T . PASS END=112592444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,108,1582:0,108,255:40,0 chr2 112592445 . C . PASS END=112592449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:72:46:0,72,1080:0,122,255:25,0 chr2 112596015 . A . PASS END=112596089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,120,1800:0,132,255:40,0 chr2 112600989 . A . PASS END=112601176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:59:0,120,1800:0,153,255:40,0 chr2 112604715 . C . PASS END=112604775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:56:0,120,1800:0,138,255:40,0 chr2 112605302 . C . PASS END=112605427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:47:0,120,1800:0,132,255:40,0 chr2 112605428 . G . PASS END=112605442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,153,255:40,0 chr2 112608353 . C . PASS END=112608487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:84:40:0,84,1260:0,106,255:40,0 chr2 112614191 . C . PASS END=112614256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:36:0,92,1299:0,92,255:40,0 chr2 112614373 . C . PASS END=112614391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,138,255:40,0 chr2 112614392 . T . PASS END=112614428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,153,255:40,0 chr2 112614429 . G A, 14.87 PASS DP=66;MQ=65.26;MQRankSum=-5.064;ReadPosRankSum=2.566;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,16,0:0.246,0.000:65:24,4,0:25,12,0:15:49,0,46,564,1716,2280:255,0,255:40,0:1.4869e+01,1.4397e-01,4.8894e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,26,9,7:26,23,9,7 chr2 112614430 . G . PASS END=112614463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,159,255:40,0 chr2 112615883 . C . PASS END=112615887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:70:0,120,1800:0,158,255:40,0 chr2 112615888 . C G, 9.10 DRAGENSnpHardQUAL DP=79;MQ=112.33;MQRankSum=-5.971;ReadPosRankSum=-2.970;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:63,16,0:0.203,0.000:79:32,9,0:31,7,0:9:43,0,47,147,147,147:255,0,255:40,0:9.0970e+00,5.7060e-01,5.0371e+01,1.4736e+02,1.8213e+02,1.5037e+02:0.00,34.77,37.78,34.77,69.54,37.78:34,29,11,5:33,30,10,6 chr2 112615889 . T . PASS END=112615932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:79:0,120,1800:0,221,255:40,0 chr2 112615933 . T C, 11.22 PASS DP=95;MQ=102.65;MQRankSum=-6.780;ReadPosRankSum=-0.296;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:73,22,0:0.232,0.000:95:38,12,0:35,10,0:11:46,0,50,787,2595,3382:255,0,255:40,0:1.1218e+01,3.4116e-01,5.3141e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:34,39,14,8:43,30,12,10 chr2 112615934 . A . PASS END=112615970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:89:0,120,1800:0,237,255:40,0 chr2 112615971 . T . PASS END=112615978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr2 112619966 . C . PASS END=112619980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,154,255:40,0 chr2 112619981 . G . LowGQ END=112619981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,10:58:0:58:0,0,1427:213,0,255:40,0 chr2 112619982 . T . PASS END=112620018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:59:0,120,1800:0,177,255:40,0 chr2 112620019 . A . PASS END=112620175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:51:0,120,1800:0,137,255:40,0 chr2 112621252 . C . PASS END=112621276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,102,1430:0,102,255:40,0 chr2 112621277 . A . PASS END=112621277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1620:0,78,255:40,0 chr2 112621278 . A . PASS END=112621453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:42:0,93,1395:0,109,255:40,0 chr2 112621454 . T . PASS END=112621467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:37:0,87,1305:0,110,255:34,0 chr2 112621468 . T . PASS END=112621469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1106:0,77,255:27,0 chr2 112621470 . T . PASS END=112621472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,98,255:29,0 chr2 112622383 . C . PASS END=112622528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,120,1800:0,137,255:40,0 chr2 112625600 . T . PASS END=112625614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,114,1527:0,114,255:40,0 chr2 112625615 . C . PASS END=112625615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1731:0,76,255:40,0 chr2 112625616 . A . PASS END=112625660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,121,255:40,0 chr2 112625661 . A . PASS END=112625661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:34:50:0,34,1645:0,34,255:40,0 chr2 112625662 . G . PASS END=112625673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,108,1620:0,128,255:40,0 chr2 112630207 . C . PASS END=112630289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:36:0,91,1250:0,91,255:40,0 chr2 112630885 . C . PASS END=112630985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:55:0,120,1800:0,146,255:40,0 chr2 112631190 . T . PASS END=112631241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:75:0,120,1800:0,182,255:40,0 chr2 112636387 . C . PASS END=112636548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,100,1660:0,100,255:40,0 chr2 112638190 . C . PASS END=112638198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:24,0 chr2 112638199 . C . PASS END=112638199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 112638200 . T . PASS END=112638208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:25,0 chr2 112638209 . G . PASS END=112638402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:29:0,84,1249:0,87,255:40,0 chr2 112656194 . C . PASS END=112656194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 112656313 . A . PASS END=112656313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1021:0,65,255:28,0 chr2 112656314 . T . PASS END=112656315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 112656316 . G . PASS END=112656316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr2 112656317 . G . PASS END=112656317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 112656318 . G . PASS END=112656318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 112656319 . C . PASS END=112656321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr2 112656322 . G . PASS END=112656322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 112656323 . C . PASS END=112656327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr2 112656328 . C . PASS END=112656328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 112656329 . T . PASS END=112656332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 112656333 . G . PASS END=112656333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 112656334 . C . PASS END=112656337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 112656338 . T . PASS END=112656345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 112656346 . C . PASS END=112656358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr2 112656359 . C . PASS END=112656374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr2 112656376 . G . PASS END=112656376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 112656379 . T . PASS END=112656379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 112686693 . A . PASS END=112686693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 112686697 . C . PASS END=112686706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 112686707 . G . PASS END=112686718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr2 112686719 . A . PASS END=112686719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 112686720 . G . PASS END=112686724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 112686725 . G . PASS END=112686725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 112686726 . C . PASS END=112686728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,907:0,75,255:25,0 chr2 112686729 . T . PASS END=112686729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 112686730 . A . PASS END=112686738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:26,0 chr2 112686739 . T . PASS END=112686740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 112686741 . C . PASS END=112686760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,947:0,64,255:26,0 chr2 112686761 . C . PASS END=112686762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 112686763 . T . PASS END=112686763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr2 112686764 . G . PASS END=112686767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1049:0,84,255:30,0 chr2 112686768 . A . PASS END=112686768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,868:0,40,255:27,0 chr2 112686769 . C . PASS END=112686778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 112686779 . A . PASS END=112686781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr2 112686782 . G . PASS END=112686824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1117:0,88,255:35,0 chr2 112686825 . A . PASS END=112686825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:34,0 chr2 112686826 . T . PASS END=112686844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1217:0,89,255:36,0 chr2 112686845 . T . PASS END=112686845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:31,0 chr2 112686846 . G . PASS END=112686916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1180:0,83,255:40,0 chr2 112686917 . T . PASS END=112686917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1402:0,68,255:36,0 chr2 112686918 . G . PASS END=112686950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:37:0,96,1364:0,98,255:39,0 chr2 112686951 . T . PASS END=112686983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:85:41:0,85,1460:0,85,255:40,0 chr2 112686984 . A . PASS END=112686984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1380:0,79,255:40,0 chr2 112686985 . T . PASS END=112686987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 112686988 . G A, 173.39 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,24,0:0,18,0:123:211,126,0,311,311,311:255,129,0:0,0:1.7339e+02,1.2339e+02,0.0000e+00,3.0816e+02,3.4293e+02,3.1117e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,21,21:0,0,19,23 chr2 112686989 . T . PASS END=112687025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,120,1754:0,120,255:40,0 chr2 112687026 . T . PASS END=112687107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:32:0,84,1260:0,94,255:40,0 chr2 112687108 . C . PASS END=112687114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 112687115 . C . PASS END=112687117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:25,0 chr2 112702537 . C . PASS END=112702609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:52:0,120,1800:0,140,255:40,0 chr2 112702610 . T . PASS END=112702637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:66:0,120,1800:0,182,255:40,0 chr2 112702642 . G . PASS END=112702642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 112702645 . C . PASS END=112702645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,114,1710:0,162,255:38,0 chr2 112704966 . C . PASS END=112704966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 112704970 . G . PASS END=112704975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 112704976 . C . PASS END=112704976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 112704977 . C . PASS END=112704981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 112704982 . T . PASS END=112704982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 112704983 . T . PASS END=112704998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,491:0,45,255:19,0 chr2 112704999 . G . PASS END=112705007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:22,0 chr2 112705008 . T . PASS END=112705008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 112705009 . G . PASS END=112705036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:26,0 chr2 112705037 . C . PASS END=112705037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 112705038 . C . PASS END=112705038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 112705039 . T . PASS END=112705107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1025:0,80,255:34,0 chr2 112705108 . C . PASS END=112705110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 112705111 . C . PASS END=112705119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 112705120 . T . PASS END=112705120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 112705121 . C . PASS END=112705127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr2 112705128 . C . PASS END=112705138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:22:0,45,675:0,66,255:19,0 chr2 112705139 . T . PASS END=112705145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 112722768 . G . PASS END=112722856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1057:0,87,255:39,0 chr2 112725714 . C . PASS END=112725728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:40:0,89,1382:0,89,255:40,0 chr2 112725729 . C . PASS END=112725830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:42:0,113,1551:0,113,255:40,0 chr2 112725838 . C . PASS END=112725838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr2 112732865 . G . PASS END=112733002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:91:34:0,91,1250:0,91,255:40,0 chr2 112733003 . C . PASS END=112733015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,83,255:26,0 chr2 112733016 . A . PASS END=112733016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 112733017 . G . PASS END=112733034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:25,0 chr2 112733035 . G . PASS END=112733035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr2 112733036 . C . PASS END=112733036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 112733037 . A . PASS END=112733049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr2 112740419 . C . PASS END=112740420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 112740421 . C . PASS END=112740422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 112740423 . A . PASS END=112740423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 112740424 . T . PASS END=112740424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr2 112740425 . C . PASS END=112740425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 112740426 . A . PASS END=112740434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:34,0 chr2 112740435 . T . PASS END=112740435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1132:0,63,255:32,0 chr2 112740436 . T . PASS END=112740452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1211:0,88,255:35,0 chr2 112740453 . T . PASS END=112740453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 112740454 . C . PASS END=112740454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:33,0 chr2 112740455 . T . PASS END=112740455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:33,0 chr2 112740456 . G . PASS END=112740462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:36:0,95,1303:0,95,255:35,0 chr2 112740463 . T . PASS END=112740463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:34,0 chr2 112740464 . C . PASS END=112740475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,100,1329:0,100,255:38,0 chr2 112740476 . T . PASS END=112740476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:37,0 chr2 112740477 . G . PASS END=112740523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:38:0,85,1397:0,85,255:40,0 chr2 112740524 . T . PASS END=112740524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr2 112740525 . G . PASS END=112740547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,92,255:33,0 chr2 112740548 . T . PASS END=112740550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,912:0,60,255:27,0 chr2 112740551 . G . PASS END=112740553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 112740554 . A . PASS END=112740568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:24,0 chr2 112740569 . C . PASS END=112740569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 112740570 . C . PASS END=112740571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 112740575 . G . PASS END=112740575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:33:23:0,33,495:0,69,255:11,0 chr2 112751828 . A . PASS END=112751828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1009:0,66,255:31,0 chr2 112751829 . A . PASS END=112751890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:33:0,92,1182:0,92,255:40,0 chr2 112751891 . A . PASS END=112751927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,108,1620:0,116,255:40,0 chr2 112751928 . G A, 166.47 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,15,0:0,25,0:116:204,119,0,1484,119,1484:255,120,0:0,0:1.6647e+02,1.1647e+02,0.0000e+00,4.5000e+02,1.5124e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,25:0,0,24,16 chr2 112751929 . A . PASS END=112751943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1395:0,108,255:36,0 chr2 112751944 . C . PASS END=112751944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:30,0 chr2 112751945 . T . PASS END=112751965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 112751966 . T . PASS END=112751967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 112751968 . T . PASS END=112751981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:26:0,66,990:0,71,255:24,0 chr2 112751983 . T . PASS END=112751983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 112752672 . T . PASS END=112752708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,195,255:40,0 chr2 112753043 . C . PASS END=112753054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:76:0,120,1800:0,195,255:40,0 chr2 112753729 . G . PASS END=112753736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:45:0,97,1645:0,97,255:40,0 chr2 112753737 . T . PASS END=112753744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:41:0,81,1215:0,107,255:32,0 chr2 112753745 . A . PASS END=112753753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:63:41:0,63,945:0,116,255:26,0 chr2 112754038 . G . PASS END=112754052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,121,255:40,0 chr2 112754053 . A . PASS END=112754053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1665:0,75,255:40,0 chr2 112754054 . C . PASS END=112754065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,128,255:40,0 chr2 112754112 . T . PASS END=112754125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,145,255:40,0 chr2 112754512 . G . PASS END=112754545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,212,255:40,0 chr2 112754826 . T . PASS END=112754842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,131,255:40,0 chr2 112754843 . A . PASS END=112754844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,150,255:40,0 chr2 112754900 . G . PASS END=112754942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,141,255:40,0 chr2 112754943 . C T, 227.12 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,23,0:0,37,0:177:265,180,0,2281,180,2281:255,180,0:0,0:2.2712e+02,1.7712e+02,0.0000e+00,4.5000e+02,2.1189e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,25:0,0,22,38 chr2 112754944 . G . PASS END=112755000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,125,255:40,0 chr2 112755001 . A G, 220.64 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,26,0:0,32,0:171:258,174,0,2182,174,2182:255,180,0:0,0:2.2064e+02,1.7064e+02,0.0000e+00,4.5000e+02,2.0541e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,32:0,0,24,34 chr2 112755002 . T . PASS END=112755038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,128,255:40,0 chr2 112755039 . G . PASS END=112755053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,102,1530:0,113,255:40,0 chr2 112755055 . T . PASS END=112755055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr2 112758776 . A . PASS END=112758776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1451:0,117,255:39,0 chr2 112758778 . G . PASS END=112758863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1260:0,100,255:40,0 chr2 112760669 . T . PASS END=112760764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:67:0,120,1800:0,166,255:40,0 chr2 112761479 . A . PASS END=112761479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 112761481 . G . PASS END=112761561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,165,255:40,0 chr2 112765960 . T . PASS END=112765972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:40:0,91,1446:0,91,255:40,0 chr2 112765973 . A G, 181.51 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,27,0:0,18,0:132:219,135,0,1686,135,1686:255,135,0:0,0:1.8151e+02,1.3151e+02,0.0000e+00,4.5000e+02,1.6628e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,16:0,0,29,16 chr2 112765974 . C . PASS END=112766010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,120,1800:0,126,255:40,0 chr2 112766011 . G . PASS END=112766052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,137,255:40,0 chr2 112766060 . C . PASS END=112766060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 112766379 . G . PASS END=112766390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:79:0,120,1800:0,224,255:40,0 chr2 112767501 . T . PASS END=112767643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,120,1800:0,161,255:40,0 chr2 112767645 . T . PASS END=112767645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr2 112767652 . C . PASS END=112767652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 112767826 . G . PASS END=112767846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,148,255:40,0 chr2 112770817 . A . PASS END=112770835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:44:0,82,1300:0,82,255:40,0 chr2 112770836 . C . PASS END=112770842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,124,255:40,0 chr2 112771116 . C . PASS END=112771135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,120,1800:0,163,255:40,0 chr2 112773380 . T . PASS END=112773386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,178,255:40,0 chr2 112776990 . C . PASS END=112777100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:39:0,96,1459:0,96,255:40,0 chr2 112778181 . C . PASS END=112778182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 112778183 . C . PASS END=112778183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 112778184 . C . PASS END=112778193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,723:0,60,255:24,0 chr2 112778194 . A . PASS END=112778194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 112778195 . T . PASS END=112778220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,886:0,62,255:26,0 chr2 112778221 . T . PASS END=112778221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 112778222 . C . PASS END=112778231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,841:0,72,255:24,0 chr2 112778941 . A . PASS END=112778953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr2 112778999 . G . PASS END=112779011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1294:0,102,255:36,0 chr2 112779012 . A . PASS END=112779012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:35,0 chr2 112779013 . T . PASS END=112779158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:38:0,87,1364:0,87,255:40,0 chr2 112779835 . T . PASS END=112779838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,872:0,75,255:26,0 chr2 112779839 . C . PASS END=112779842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,914:0,84,255:28,0 chr2 112779843 . T . PASS END=112779843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 112779844 . G . PASS END=112779972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:32:0,83,1156:0,83,255:40,0 chr2 112779977 . T . PASS END=112779977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 112780079 . C . PASS END=112780099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1216:0,83,255:34,0 chr2 112780100 . G . PASS END=112780100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 112783743 . G . PASS END=112783770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:87:0,120,1800:0,231,255:40,0 chr2 112785781 . G . PASS END=112785812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:43:0,101,1388:0,101,255:40,0 chr2 112785813 . A . PASS END=112785830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,105,1672:0,105,255:40,0 chr2 112785853 . T . PASS END=112785882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,128,255:40,0 chr2 112785928 . G . PASS END=112786050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1264:0,90,255:40,0 chr2 112786051 . T . PASS END=112786052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:29:0,77,1094:0,77,255:27,0 chr2 112786053 . T . PASS END=112786054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 112786055 . T . PASS END=112786055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr2 112786056 . A . PASS END=112786061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:28,0 chr2 112786062 . A . PASS END=112786062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1021:0,79,255:26,0 chr2 112786063 . T . PASS END=112786066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 112786067 . C . PASS END=112786068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 112786069 . G . PASS END=112786069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 112786070 . T . PASS END=112786079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 112786080 . G . PASS END=112786097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:32,0 chr2 112786098 . A . PASS END=112786098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr2 112786099 . G . PASS END=112786236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1194:0,83,255:35,0 chr2 112786237 . T . PASS END=112786237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:33,0 chr2 112786238 . G . PASS END=112786441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:34:0,93,1274:0,98,255:40,0 chr2 112786452 . G . PASS END=112786452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 112786498 . T . PASS END=112786498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 112786552 . G . PASS END=112786553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,190,255:40,0 chr2 112786634 . T . PASS END=112786634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 112786750 . C . PASS END=112786751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,232,255:40,0 chr2 112786830 . A . PASS END=112786830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:84:0,120,1800:0,221,255:40,0 chr2 112786880 . A . PASS END=112786880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 112813169 . A . PASS END=112813171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr2 112813172 . G . PASS END=112813185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr2 112813186 . C . PASS END=112813186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 112813187 . T . PASS END=112813187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 112813188 . C . PASS END=112813188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 112813189 . G . PASS END=112813198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:30,0 chr2 112813199 . C . PASS END=112813199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 112813200 . T . PASS END=112813200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr2 112813201 . C . PASS END=112813227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1185:0,80,255:33,0 chr2 112813228 . C . PASS END=112813228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1092:0,52,255:30,0 chr2 112813229 . G . PASS END=112813289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1088:0,83,255:34,0 chr2 112813290 . G . PASS END=112813291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:29:0,77,1116:0,77,255:27,0 chr2 112813292 . G . PASS END=112813292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 112813293 . C . PASS END=112813311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:21:0,60,900:0,63,255:25,0 chr2 112813312 . C . PASS END=112813332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,690:0,44,255:18,0 chr2 112813333 . C . PASS END=112813333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 112817554 . A . PASS END=112817614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:92:0,120,1800:0,230,255:40,0 chr2 112821739 . T . PASS END=112821830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,138,255:40,0 chr2 112824513 . G . PASS END=112824644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,120,1800:0,154,255:40,0 chr2 112832489 . A . PASS END=112832490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:84:82:0,84,1260:0,233,255:28,0 chr2 112832491 . T . PASS END=112832491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:78:83:0,78,1170:0,249,255:26,0 chr2 112832492 . A . PASS END=112832519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:42:80:0,42,630:0,193,255:18,0 chr2 112832520 . C . PASS END=112832521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:18:82:0,18,270:0,246,255:6,0 chr2 112832522 . A . LowGQ END=112832534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:81,1:82:0:80:0,0,0:0,202,255:2,1 chr2 112832535 . CAAT C, 284.80 PASS DP=79;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,79,0:1.000,0.000:79:0,45,0:0,34,0:235:317,238,0,3555,238,3555:255,163,0:0,116:2.8480e+02,2.3480e+02,0.0000e+00,4.4853e+02,2.6957e+02,4.4853e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,28,51:0,0,32,47 chr2 112832536 . A . LowGQ END=112832539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,118:118:0:79:0,0,0:255,198,0:40,116 chr2 112834768 . G . PASS END=112834859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:79:0,120,1800:0,206,255:40,0 chr2 112838634 . T . PASS END=112838695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:67:0,120,1800:0,194,255:40,0 chr2 112838912 . T . PASS END=112839095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:80:30:0,80,1155:0,80,255:40,0 chr2 112843582 . C . PASS END=112843681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:33:0,92,1256:0,92,255:40,0 chr2 112847202 . G . PASS END=112847295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,114,1660:0,114,255:40,0 chr2 112849289 . G . PASS END=112849360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:81:0,120,1800:0,206,255:40,0 chr2 112852805 . G . PASS END=112852806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 112852807 . G . PASS END=112852825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:24,0 chr2 112852826 . C . PASS END=112852839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:29,0 chr2 112852840 . C . PASS END=112852846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:30,0 chr2 112852847 . T . PASS END=112852850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:25,0 chr2 112852851 . T . PASS END=112852851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1002:0,38,255:24,0 chr2 112852852 . C . PASS END=112852869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:25:0,61,892:0,61,255:26,0 chr2 112852870 . C . PASS END=112852870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 112852871 . T . PASS END=112852876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 112854621 . A . PASS END=112854729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:35:0,81,1072:0,81,255:40,0 chr2 112854810 . C . PASS END=112854868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,114,1702:0,114,255:40,0 chr2 112856172 . G . PASS END=112856202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,186,255:40,0 chr2 112856203 . T . PASS END=112856275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:62:0,120,1800:0,167,255:40,0 chr2 112858199 . A . PASS END=112858272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:83:0,120,1800:0,216,255:40,0 chr2 112863579 . C . PASS END=112863652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:59:0,120,1800:0,160,255:40,0 chr2 112865365 . G . PASS END=112865417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:94:0,120,1800:0,249,255:40,0 chr2 112870476 . A . PASS END=112870506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:126,0:126:99:119:0,120,1800:0,255,255:40,0 chr2 112873661 . G . PASS END=112873720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:85:0,120,1800:0,250,255:40,0 chr2 112896233 . A . PASS END=112896237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,773:0,75,255:26,0 chr2 112896238 . G . PASS END=112896241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 112896242 . A . PASS END=112896242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 112896243 . G . PASS END=112896298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1017:0,84,255:33,0 chr2 112896299 . G . PASS END=112896305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 112896306 . A . PASS END=112896306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:24,0 chr2 112896307 . G . PASS END=112896307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 112917253 . A . PASS END=112917262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,458:0,39,255:13,0 chr2 112917263 . G . PASS END=112917263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 112917264 . C . PASS END=112917274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:12,0 chr2 112917275 . T . PASS END=112917275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 112917276 . C . PASS END=112917304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,523:0,48,255:16,0 chr2 112917305 . T . PASS END=112917305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 112917306 . G . PASS END=112917311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 112917312 . G . PASS END=112917312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 112917313 . G . PASS END=112917376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,568:0,41,255:19,0 chr2 112917377 . A . PASS END=112917377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 112917378 . C . PASS END=112917380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 112917381 . T . PASS END=112917386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 112917387 . C . PASS END=112917387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 112917388 . A . PASS END=112917390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 112917391 . G . PASS END=112917412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 112922578 . T . PASS END=112922588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,909:0,78,255:26,0 chr2 112922589 . G . PASS END=112922597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr2 112922598 . A . PASS END=112922598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 112922599 . C . PASS END=112922615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1149:0,93,255:32,0 chr2 112922616 . A . PASS END=112922616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 112922617 . A . PASS END=112922748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1127:0,80,255:38,0 chr2 112933291 . G . PASS END=112933293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr2 112933294 . T . PASS END=112933294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 112933295 . C . PASS END=112933328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1078:0,80,255:36,0 chr2 112933329 . G . PASS END=112933329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 112933330 . G . PASS END=112933416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:90:36:0,90,1350:0,97,255:40,0 chr2 112939316 . C . PASS END=112939321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 112939322 . C . PASS END=112939386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:19,0 chr2 112939387 . G . PASS END=112939438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:24,0 chr2 112939439 . A . PASS END=112939439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 112939440 . C . PASS END=112939442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 112939443 . C . PASS END=112939451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 112939452 . G . PASS END=112939453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 112939460 . G . PASS END=112939464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 112939465 . C . PASS END=112939465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 112939466 . T . PASS END=112939467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 112939468 . C . PASS END=112939491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 112939492 . G . PASS END=112939576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1028:0,82,255:36,0 chr2 112939577 . T . PASS END=112939578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:30,0 chr2 112939579 . G . PASS END=112939581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 112939582 . A . PASS END=112939582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 112939583 . C . PASS END=112939583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 112939584 . T . PASS END=112939584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,948:0,73,255:28,0 chr2 112939585 . T . PASS END=112939587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 112939588 . C . PASS END=112939595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:29:0,63,945:0,70,255:26,0 chr2 112940368 . A . PASS END=112940371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,674:0,54,255:19,0 chr2 112940372 . G . PASS END=112940373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 112940374 . A . PASS END=112940374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 112940375 . C . PASS END=112940411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,775:0,60,255:26,0 chr2 112940412 . C . PASS END=112940483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1114:0,80,255:35,0 chr2 112940484 . G . PASS END=112940484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 112940485 . C . PASS END=112940505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1127:0,93,255:31,0 chr2 112942778 . A . PASS END=112942786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1031:0,84,255:29,0 chr2 112942787 . A . PASS END=112942787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 112942788 . A . PASS END=112942790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:30,0 chr2 112942791 . T . PASS END=112942791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 112942792 . G . PASS END=112942793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 112942794 . G . PASS END=112942794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 112942795 . G . PASS END=112942869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1186:0,83,255:35,0 chr2 112942870 . T . PASS END=112942870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 112942871 . G . PASS END=112942871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1078:0,49,255:25,0 chr2 112942872 . C . PASS END=112942879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,80,255:26,0 chr2 112942880 . G . PASS END=112942880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1008:0,43,255:24,0 chr2 112942881 . C . PASS END=112942895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,931:0,62,255:25,0 chr2 112942896 . C . PASS END=112942896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 112942897 . T . PASS END=112942910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 112942911 . T . PASS END=112942916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:18,0 chr2 112944566 . C . PASS END=112944584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1279:0,89,255:37,0 chr2 112944711 . C . PASS END=112944727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,91,255:35,0 chr2 112944728 . C . PASS END=112944729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:67:35:0,67,1271:0,67,255:34,0 chr2 112944730 . T . PASS END=112945117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:34:0,84,1305:0,84,255:40,1 chr2 112945139 . G . PASS END=112945139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 112945140 . C . PASS END=112945140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:29,0 chr2 112945141 . T . PASS END=112945150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1255:0,86,255:31,0 chr2 112945151 . G . PASS END=112945156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 112945157 . A . PASS END=112945157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 112945158 . C . PASS END=112945164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 112945165 . G . PASS END=112945186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 112945187 . C . PASS END=112945187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 112945188 . T A, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,16,0:0,7,0:66:154,69,0,876,69,876:255,69,0:0,0:1.1622e+02,6.6218e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,17:0,0,7,16 chr2 112945189 . C . PASS END=112945213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr2 112969971 . G . PASS END=112969977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,189,255:40,0 chr2 112974042 . C . PASS END=112974045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr2 112979173 . G . PASS END=112979203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,175,255:40,0 chr2 112988368 . T . PASS END=112988462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:48:0,115,1800:0,115,255:40,0 chr2 112988480 . C . PASS END=112988527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:88:0,120,1800:0,247,255:40,0 chr2 112989415 . T . PASS END=112989524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,124,255:40,0 chr2 112990835 . A . PASS END=112990948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:79:0,120,1800:0,210,255:40,0 chr2 112991697 . C . PASS END=112991813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,145,255:40,0 chr2 112994139 . C . PASS END=112994272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:37:0,93,1281:0,97,255:40,0 chr2 112995892 . C . PASS END=112996105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:47:0,99,1485:0,123,255:40,0 chr2 112996698 . A . PASS END=112996711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,162,255:40,0 chr2 113007768 . T . PASS END=113007849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:64:0,120,1800:0,161,255:40,0 chr2 113012485 . C . PASS END=113012508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:16,0 chr2 113012509 . T . PASS END=113012509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr2 113012510 . T . PASS END=113012518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 113012519 . C . PASS END=113012544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr2 113012545 . T . PASS END=113012545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 113012546 . T . PASS END=113012558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,437:0,39,255:13,0 chr2 113033572 . A . PASS END=113033576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1233:0,89,255:35,0 chr2 113033577 . A . PASS END=113033577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:32,0 chr2 113033578 . G . PASS END=113033587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,102,1530:0,108,255:37,0 chr2 113033588 . A . PASS END=113033588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr2 113033589 . T . PASS END=113033603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1288:0,81,255:38,0 chr2 113057426 . A . PASS END=113057606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:41:0,117,1646:0,117,255:40,0 chr2 113060806 . C . PASS END=113060928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:45:0,105,1664:0,105,255:40,0 chr2 113067462 . C . PASS END=113067728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:92:36:0,92,1302:0,92,255:40,2 chr2 113067729 . G . PASS END=113067729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:52:51:0,52,1233:0,52,255:40,0 chr2 113067730 . T . PASS END=113067738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:48:0,120,1800:0,136,255:40,0 chr2 113069381 . G . PASS END=113069514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:90:38:0,90,1329:0,90,255:40,0 chr2 113074047 . T . PASS END=113074163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:59:0,120,1800:0,161,255:40,0 chr2 113074798 . G . PASS END=113074827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,2:99:99:82:0,116,1800:0,116,255:40,0 chr2 113074828 . G . PASS END=113074911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:96:0,120,1800:0,238,255:40,0 chr2 113079333 . A . PASS END=113079442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,101,1441:0,101,255:40,0 chr2 113080226 . G . PASS END=113080227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 113080228 . G . PASS END=113080246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,853:0,69,255:26,0 chr2 113080247 . C . PASS END=113080247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113080248 . T . PASS END=113080271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,885:0,68,255:26,0 chr2 113080272 . T . PASS END=113080272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 113080273 . A . PASS END=113080292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,894:0,68,255:26,0 chr2 113080293 . G . PASS END=113080295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 113080296 . T . PASS END=113080296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 113080297 . A . PASS END=113080297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 113080298 . A . PASS END=113080298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 113080299 . C . PASS END=113080299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 113080300 . T . PASS END=113080300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 113080301 . C . PASS END=113080302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 113080303 . T . PASS END=113080303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:28,0 chr2 113080304 . C . PASS END=113080313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1216:0,83,255:32,0 chr2 113080314 . C . PASS END=113080316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1097:0,60,255:31,0 chr2 113080317 . C . PASS END=113080318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 113080319 . C . PASS END=113080320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:30,0 chr2 113080321 . A . PASS END=113080463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1150:0,82,255:40,0 chr2 113080464 . A . PASS END=113080464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:26,0 chr2 113080465 . T . PASS END=113080467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113080468 . A . PASS END=113080470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:26,0 chr2 113080471 . T . PASS END=113080471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113080472 . G . PASS END=113080479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 113081729 . G . PASS END=113081729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 113081730 . C . PASS END=113081730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 113081731 . C . PASS END=113081733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 113081734 . C . PASS END=113081735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 113081736 . G . PASS END=113081736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 113081737 . C . PASS END=113081737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 113081738 . A . PASS END=113081745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1086:0,87,255:37,0 chr2 113081746 . C . PASS END=113081746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr2 113081747 . C . PASS END=113081837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1194:0,83,255:40,0 chr2 113081838 . A . PASS END=113081838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 113081839 . A . PASS END=113081884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1072:0,87,255:32,0 chr2 113081885 . T . PASS END=113081888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr2 113081889 . C . PASS END=113081890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 113081891 . T . PASS END=113081891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 113081892 . C . PASS END=113081892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 113081893 . A . PASS END=113081893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 113081894 . C . PASS END=113081901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:33,0 chr2 113081902 . C . PASS END=113081902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 113081903 . A . PASS END=113081905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 113081906 . A . PASS END=113081906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:29,0 chr2 113081907 . C . PASS END=113081980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:34:0,90,1350:0,93,255:39,0 chr2 113081981 . A . PASS END=113081981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1205:0,78,255:34,0 chr2 113081982 . G . PASS END=113082233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:36:0,81,1278:0,81,255:40,0 chr2 113082234 . T . PASS END=113082234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1413:0,49,255:33,0 chr2 113082235 . C . PASS END=113082240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,95,255:29,0 chr2 113082541 . A . PASS END=113082664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:30:0,81,1088:0,83,255:40,0 chr2 113082665 . C . PASS END=113082676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:29:0,63,945:0,66,255:25,0 chr2 113082677 . A . PASS END=113082677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr2 113082678 . G . PASS END=113082726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,848:0,61,255:26,0 chr2 113082727 . A . PASS END=113082732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 113082733 . A . PASS END=113082735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:20,0 chr2 113082736 . C . PASS END=113082743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 113082744 . C . PASS END=113082744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:13,0 chr2 113082745 . A . PASS END=113082760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:13:0,32,443:0,32,255:13,0 chr2 113082761 . A . PASS END=113082763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 113082764 . C . PASS END=113082772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 113082773 . A . PASS END=113082773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 113082774 . G . PASS END=113082774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 113088582 . A . PASS END=113089004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:43:0,104,1551:0,104,255:40,0 chr2 113089005 . T . PASS END=113089005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:66:49:0,66,1462:0,66,255:40,0 chr2 113089006 . C . PASS END=113089534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:32:0,81,1194:0,83,255:40,0 chr2 113089535 . A . PASS END=113089535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr2 113089536 . G . PASS END=113089536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr2 113089537 . C . PASS END=113089537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 113089538 . A . PASS END=113089576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1101:0,83,255:33,0 chr2 113089577 . C . PASS END=113089578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:31:0,69,1048:0,69,255:27,0 chr2 113089579 . C . PASS END=113089579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113089580 . T . PASS END=113089588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 113089589 . G . PASS END=113089624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:31,0 chr2 113089625 . A . PASS END=113089625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 113089626 . G . PASS END=113089630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 113089631 . A . PASS END=113089631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 113089632 . T . PASS END=113089641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1085:0,80,255:31,0 chr2 113089642 . T . PASS END=113089643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:25,0 chr2 113089644 . A . PASS END=113089651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,82,255:28,0 chr2 113089652 . G . PASS END=113089670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,962:0,67,255:26,0 chr2 113089671 . C . PASS END=113089675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 113089676 . G . PASS END=113089680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 113089681 . A . PASS END=113089681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,887:0,45,255:26,0 chr2 113089682 . G . PASS END=113089683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113089684 . A . PASS END=113089686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 113089687 . A . PASS END=113089690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 113089691 . T . PASS END=113089691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:27,0 chr2 113089692 . C . PASS END=113089700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 113089701 . A . PASS END=113089702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 113089703 . A . PASS END=113089706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr2 113089707 . C . PASS END=113089711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 113089712 . A . PASS END=113089717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 113089718 . A . PASS END=113089718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr2 113089719 . A . PASS END=113089722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 113089723 . A . PASS END=113089739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 113089740 . G . PASS END=113089740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 113089741 . T . PASS END=113089743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 113089744 . T . PASS END=113089744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:20,0 chr2 113089745 . G . PASS END=113089747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 113089748 . A . PASS END=113089748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr2 113089749 . A . PASS END=113089752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 113089753 . T . PASS END=113089753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 113089754 . G . PASS END=113089759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,876:0,69,255:23,0 chr2 113089760 . T . PASS END=113089760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 113089761 . C . PASS END=113089765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 113089766 . G . PASS END=113089766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 113089767 . G . PASS END=113089774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,886:0,69,255:26,0 chr2 113089775 . A . PASS END=113089775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 113089776 . T . PASS END=113089782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:28,0 chr2 113089783 . A . PASS END=113089783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 113089784 . C . PASS END=113089786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 113089787 . A . PASS END=113089788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:28,0 chr2 113089789 . A . PASS END=113089789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 113089790 . C . PASS END=113089790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 113089791 . C . PASS END=113089791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 113089792 . C . PASS END=113089793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:26,0 chr2 113089794 . G . PASS END=113089796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 113089797 . C . PASS END=113089799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 113089800 . A . PASS END=113089801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,92,255:27,0 chr2 113089802 . G . PASS END=113089802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 113089803 . T . PASS END=113089809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:27,0 chr2 113089810 . C . PASS END=113089825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,938:0,67,255:26,0 chr2 113089826 . G . PASS END=113089826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113089827 . C . PASS END=113089861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,961:0,65,255:26,0 chr2 113089862 . A . PASS END=113089862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:21,0 chr2 113089863 . A . PASS END=113089873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 113089874 . C . PASS END=113089879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,828:0,53,255:19,0 chr2 113089880 . G . PASS END=113089924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,893:0,65,255:26,0 chr2 113089925 . C . PASS END=113089944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,99,255:35,0 chr2 113089945 . G . PASS END=113089945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1217:0,53,255:33,0 chr2 113089946 . G . PASS END=113090065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:36:0,87,1285:0,87,255:40,0 chr2 113091554 . T . PASS END=113091564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,243,255:40,0 chr2 113127755 . T . PASS END=113127759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,178,255:40,0 chr2 113127760 . C . PASS END=113127774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:74:0,120,1800:0,192,255:40,0 chr2 113127775 . G . PASS END=113127775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,5:74:73:74:0,73,2421:0,73,255:40,0 chr2 113127776 . A . PASS END=113127789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,200,255:40,0 chr2 113135630 . C . PASS END=113135641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr2 113135642 . C . PASS END=113135642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 113135643 . A . PASS END=113135645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 113135646 . A . PASS END=113135646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 113135647 . A . PASS END=113135686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 113135687 . T . PASS END=113135704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 113135705 . T . PASS END=113135723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,94:0,9,94:3,0 chr2 113135724 . C T, 8.64 DRAGENSnpHardQUAL DP=3;MQ=1.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,2,0:0,1,0:5:45,9,0,116,9,116:116,9,0:0,0:8.6362e+00,7.6362e+00,1.6070e+00,1.1494e+02,4.2406e+01,1.1794e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,3:0,0,1,2 chr2 113135725 . T . PASS END=113135761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr2 113135762 . A . LowDepth;LowGQ END=113135784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,39:1,0 chr2 113135785 . T . LowDepth;LowGQ END=113135831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113138401 . C . PASS END=113138501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,93,255:40,0 chr2 113138502 . A . PASS END=113138502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 113138503 . T . PASS END=113138504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 113138505 . C . PASS END=113138505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr2 113138506 . T . PASS END=113138509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 113138510 . T . PASS END=113138513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 113138514 . T . PASS END=113138514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 113138515 . A . PASS END=113138519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1061:0,71,255:25,0 chr2 113138520 . C . PASS END=113138520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:24,0 chr2 113138521 . A . PASS END=113138528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:25,0 chr2 113138529 . A . PASS END=113138540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:20:0,42,630:0,59,255:18,0 chr2 113144607 . T . PASS END=113144623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,64:0,9,64:3,0 chr2 113144624 . G . PASS END=113144629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 113144630 . T . LowGQ END=113144630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr2 113144631 . A . PASS END=113144647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 113144648 . G . PASS END=113144697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 113144698 . C . PASS END=113144710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 113145601 . C . PASS END=113145601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr2 113145602 . C . PASS END=113145612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,515:0,40,255:19,0 chr2 113145613 . T . PASS END=113145616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 113145617 . A . PASS END=113145617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 113145618 . A . PASS END=113145622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr2 113145623 . G . PASS END=113145623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 113145624 . T . PASS END=113145629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,771:0,72,255:24,0 chr2 113145630 . A . PASS END=113145630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:22,0 chr2 113145631 . T . PASS END=113145646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,903:0,64,255:26,0 chr2 113145647 . T . PASS END=113145652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 113145653 . G . PASS END=113145653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 113145654 . G . PASS END=113145657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 113145658 . C . PASS END=113145680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,880:0,64,255:26,0 chr2 113145681 . T . PASS END=113145713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1184:0,83,255:32,0 chr2 113145714 . A . PASS END=113145714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,977:0,79,255:31,0 chr2 113145715 . G . PASS END=113145730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1119:0,96,255:32,0 chr2 113145731 . T . PASS END=113145731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr2 113145732 . T . PASS END=113145776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1224:0,83,255:40,0 chr2 113145777 . C . PASS END=113145813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,127,255:40,0 chr2 113145814 . C T, 26.10 PASS DP=62;MQ=17.90;MQRankSum=1.692;ReadPosRankSum=1.877;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,48,0:0.774,0.000:62:5,29,0:9,19,0:7:60,0,2,1690,390,2080:255,0,255:13,0:2.6097e+01,1.0975e+00,6.5590e+00,4.5000e+02,4.2615e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,29,19:9,5,24,24 chr2 113145815 . A . PASS END=113145851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,181,255:40,0 chr2 113145852 . A . PASS END=113145899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:72:0,120,1800:0,164,255:40,0 chr2 113145900 . A . PASS END=113145900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,5:74:28:74:0,28,2340:0,28,255:40,0 chr2 113145901 . C . PASS END=113146126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:33:0,81,1187:0,88,255:40,0 chr2 113146127 . T . PASS END=113146127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 113146128 . G . PASS END=113146128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 113146129 . T . PASS END=113146129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1034:0,65,255:26,0 chr2 113146130 . T . PASS END=113146132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 113146133 . T . PASS END=113146136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1055:0,74,255:26,0 chr2 113146137 . T . PASS END=113146139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 113146140 . T . PASS END=113146147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,71,255:24,0 chr2 113146148 . T . PASS END=113146148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:24,0 chr2 113146149 . T . PASS END=113146166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:24,0 chr2 113146167 . A . PASS END=113146197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,47,255:18,0 chr2 113146198 . G . PASS END=113146198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 113146199 . C . PASS END=113146225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr2 113146226 . A . PASS END=113146232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 113146233 . G . PASS END=113146233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 113146234 . C . PASS END=113146239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:10,0 chr2 113146240 . A . PASS END=113146266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr2 113146267 . T . PASS END=113146267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 113146268 . A . PASS END=113146284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,266:0,27,255:9,0 chr2 113146285 . C . LowGQ END=113146285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,249:12,0,255:7,0 chr2 113146286 . T . PASS END=113146316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 113146317 . A . PASS END=113146363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,210:6,0 chr2 113146364 . A . PASS END=113146364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 113146365 . T . PASS END=113146527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr2 113146528 . G . PASS END=113146555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 113146556 . A . PASS END=113146568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,172:0,15,166:6,0 chr2 113146569 . T . LowGQ END=113146569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 113146570 . C . PASS END=113146571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 113146572 . G . PASS END=113146572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 113146573 . T . PASS END=113146577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 113146578 . A . LowGQ END=113146578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,47:15,0,63:4,0 chr2 113146579 . C . PASS END=113146580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 113146581 . G . PASS END=113146581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr2 113146582 . A . PASS END=113146584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 113146585 . T . PASS END=113146585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 113146586 . C . PASS END=113146592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr2 113146593 . T . PASS END=113146593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 113146594 . G . PASS END=113146610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,266:0,27,255:9,0 chr2 113146611 . G . PASS END=113146612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 113146613 . C . PASS END=113146614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 113146615 . T . PASS END=113146618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 113146619 . T . PASS END=113146619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 113146620 . A . PASS END=113146622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 113146623 . C . PASS END=113146627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 113146628 . A . PASS END=113146628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,264:0,13,255:9,0 chr2 113146629 . G . PASS END=113146639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 113146640 . A . PASS END=113146640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 113146641 . C . PASS END=113146645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 113146646 . G . PASS END=113146646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 113146647 . T . LowGQ END=113146647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,296:6,0,255:9,0 chr2 113146648 . T . PASS END=113146648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 113146649 . A . PASS END=113146650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 113146651 . A . PASS END=113146651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,268:0,2,255:10,0 chr2 113146652 . T . PASS END=113146655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr2 113146656 . G . PASS END=113146662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 113146663 . A . PASS END=113146663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 113146664 . C . PASS END=113146664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 113146665 . T . PASS END=113146665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 113146666 . C . PASS END=113146666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113146667 . A . PASS END=113146667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 113146668 . T . PASS END=113146670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 113146671 . A . PASS END=113146671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,455:0,26,255:12,0 chr2 113146672 . A . PASS END=113146673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 113146674 . C . PASS END=113146674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr2 113146675 . G . PASS END=113146694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,344:0,36,255:12,0 chr2 113146695 . G . LowGQ END=113146695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr2 113146696 . G . PASS END=113146696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 113146697 . G . PASS END=113146699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,592:0,51,255:18,0 chr2 113146700 . A . PASS END=113146700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 113146701 . C . PASS END=113146701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 113146702 . T . PASS END=113146703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 113146704 . G . PASS END=113146704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 113146705 . C . PASS END=113146710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr2 113146711 . G . PASS END=113146711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 113146712 . A . PASS END=113146712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 113146713 . G . PASS END=113146713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 113146714 . A . PASS END=113146715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:24:0,69,1035:0,72,255:29,0 chr2 113146716 . G . PASS END=113146720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:33,0 chr2 113146721 . T . PASS END=113146721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:32,0 chr2 113146722 . A . PASS END=113147121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:34:0,99,1213:0,102,255:40,0 chr2 113147122 . T . PASS END=113147158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:145,1:146:99:111:0,120,1800:0,255,255:40,0 chr2 113147159 . G A, 21.20 PASS DP=112;MQ=19.66;MQRankSum=-0.287;ReadPosRankSum=2.004;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:69,43,0:0.384,0.000:112:28,23,0:41,20,0:21:56,0,27,1426,2394,3820:255,0,255:40,0:2.1203e+01,3.7388e-02,3.0037e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,42,6,37:36,33,22,21 chr2 113147160 . G . PASS END=113147237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:46:0,102,1530:0,109,255:40,0 chr2 113147238 . A G, 0.90 DRAGENSnpHardQUAL DP=46;MQ=15.13;MQRankSum=-1.253;ReadPosRankSum=2.948;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:32,14,0:0.304,0.000:46:10,6,0:22,8,0:7:28,0,23,128,128,128:255,0,255:22,0:9.0010e-01,7.2881e+00,3.3288e+01,1.3567e+02,1.7044e+02,1.3868e+02:0.00,34.77,37.78,34.77,69.54,37.78:13,19,0,14:13,19,8,6 chr2 113147239 . G . PASS END=113147239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,108,1620:0,135,255:36,0 chr2 113147240 . T . PASS END=113147240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:78:43:0,78,1125:0,78,255:33,0 chr2 113147241 . T . PASS END=113147275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1138:0,91,255:38,0 chr2 113147276 . C . PASS END=113147309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1164:0,84,255:35,0 chr2 113147310 . G . PASS END=113147310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr2 113147311 . C . PASS END=113147323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1135:0,93,255:31,0 chr2 113147324 . T . PASS END=113147324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 113147325 . A . PASS END=113147329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113147330 . T . PASS END=113147332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 113147333 . C . PASS END=113147369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,931:0,64,255:26,0 chr2 113147370 . G A, 0.20 DRAGENSnpHardQUAL DP=23;MQ=15.03;MQRankSum=-2.572;ReadPosRankSum=1.570;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:16,7,0:0.304,0.000:23:9,3,0:7,4,0:13:21,0,26,221,572,794:180,0,255:16,0:1.9946e-01,1.3484e+01,4.2484e+01,2.3497e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,0,7:7,9,4,3 chr2 113147371 . T . PASS END=113147374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 113147375 . A . PASS END=113147405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,538:0,40,255:18,0 chr2 113147406 . G . PASS END=113147406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 113147407 . G . PASS END=113147407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 113147408 . T . PASS END=113147415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 113147416 . G . PASS END=113147416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 113147417 . G . PASS END=113147433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 113147434 . C . PASS END=113147435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr2 113147436 . G . PASS END=113147461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,599:0,49,255:18,0 chr2 113147462 . A . PASS END=113147462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 113147463 . A . PASS END=113147490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:19,0 chr2 113147491 . C . PASS END=113147501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 113147502 . T . PASS END=113147502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 113147503 . A . PASS END=113147511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr2 113147512 . A . PASS END=113147512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 113147513 . G . PASS END=113147517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,771:0,61,255:26,0 chr2 113147518 . A . PASS END=113147525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:32,0 chr2 113147526 . C . PASS END=113147526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:31,0 chr2 113147527 . C . PASS END=113147824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:32:0,81,1158:0,85,255:40,0 chr2 113148552 . C . PASS END=113148646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:50:0,117,1800:0,117,255:40,0 chr2 113150684 . T . PASS END=113150698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,230:0,27,230:9,0 chr2 113150699 . T . PASS END=113150699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,247:0,10,247:8,0 chr2 113150700 . C . PASS END=113150708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 113150709 . T . PASS END=113150747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:12,0 chr2 113150748 . C . PASS END=113150748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 113150749 . A . PASS END=113150755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,328:0,36,255:12,0 chr2 113150756 . G . PASS END=113150796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr2 113152195 . C . LowDepth;LowGQ END=113152330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113155499 . C . LowDepth;LowGQ END=113155582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113155676 . C . LowDepth;LowGQ END=113155855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113156800 . T . LowDepth END=113156856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 113156857 . C . LowDepth;LowGQ END=113156891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:2,0 chr2 113156892 . G C, 2.16 DRAGENSnpHardQUAL DP=2;MQ=11.00;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,0,0:1,1,0:4:33,0,11,36,36,71:33,0,33:1,0:2.1597e+00,4.2398e+00,1.8240e+01,3.9939e+01,7.4768e+01,7.8697e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,1,0:0,1,0,1 chr2 113156893 . T . LowGQ END=113156927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:2,0 chr2 113156928 . C . LowDepth END=113156946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:2,0 chr2 113157209 . C . PASS END=113157346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,155,255:40,0 chr2 113157613 . C . PASS END=113157644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,94:0,12,94:6,0 chr2 113157645 . G . LowDepth;LowGQ END=113157734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:2,0 chr2 113157735 . A . LowDepth;LowGQ END=113157771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113158694 . C . LowDepth;LowGQ END=113158817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113158985 . A . LowDepth;LowGQ END=113159160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113159244 . T . LowDepth;LowGQ END=113159425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113161543 . C . PASS END=113161577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:32,0 chr2 113161578 . T . PASS END=113161578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:29,0 chr2 113161579 . C . PASS END=113161584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 113161585 . C . PASS END=113161585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 113161586 . A . PASS END=113161605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1197:0,88,255:33,0 chr2 113161606 . C . PASS END=113161607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:32,0 chr2 113161608 . C . PASS END=113161616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,86,255:31,0 chr2 113161617 . A . PASS END=113161621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr2 113161622 . T . PASS END=113161623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:57:32:0,57,855:0,96,255:19,0 chr2 113161624 . T . PASS END=113161643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,823:0,66,255:22,0 chr2 113161644 . G . PASS END=113161644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 113161645 . A . PASS END=113161645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 113161646 . A . PASS END=113161646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 113161647 . A . PASS END=113161650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 113161651 . G . PASS END=113161655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr2 113161656 . T . PASS END=113161701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr2 113161702 . C . PASS END=113161702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 113161703 . C . PASS END=113161703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 113161704 . T . PASS END=113161719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 113161720 . G . PASS END=113161726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 113161727 . A . PASS END=113161728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:10:0,12,180:0,30,255:4,0 chr2 113161729 . G . LowGQ END=113161752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,24:0,0,46:3,0 chr2 113163874 . C . LowDepth;LowGQ END=113163961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113170008 . C . LowDepth END=113170031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:3,0 chr2 113170032 . T C, 10.86 PASS DP=3;MQ=7.07;MQRankSum=0.736;ReadPosRankSum=-0.736;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,2,0:0.667,0.000:3:1,2,0:0,0,0:7:45,0,6,72,36,107:69,0,30:1,0:1.0858e+01,8.5832e-01,1.0120e+01,7.2384e+01,7.1396e+01,1.1115e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,2,0:1,0,2,0 chr2 113170033 . G . PASS END=113170039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 113170040 . G . PASS END=113170069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr2 113170070 . T . PASS END=113170086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 113170087 . T . PASS END=113170098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,211:0,21,211:7,0 chr2 113170099 . G . PASS END=113170101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 113170102 . C . PASS END=113170126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 113170127 . T . PASS END=113170127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:6,0 chr2 113170128 . C . PASS END=113170143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,182:0,21,182:7,0 chr2 113170144 . G . PASS END=113170144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 113170145 . C . PASS END=113170154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 113170155 . A . PASS END=113170155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr2 113170156 . T . PASS END=113170160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr2 113170161 . T . PASS END=113170162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr2 113170163 . C . PASS END=113170163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr2 113170164 . A . PASS END=113170166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:5,0 chr2 113170167 . C . PASS END=113170167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:4,0 chr2 113170168 . A . PASS END=113170180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr2 113170181 . C . LowGQ END=113170203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,72:0,0,72:3,0 chr2 113174770 . C . PASS END=113174915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:40:0,108,1620:0,116,255:40,0 chr2 113175261 . C . PASS END=113175268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,164:4,0 chr2 113175269 . T . LowDepth;LowGQ END=113175375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:3,0 chr2 113175376 . A . LowDepth;LowGQ END=113175491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 113179537 . C . LowDepth;LowGQ END=113179689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr2 113180125 . C . PASS END=113180204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:74:0,120,1800:0,163,255:40,0 chr2 113180205 . T . PASS END=113180205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,9:74:71:74:0,71,1671:0,71,255:40,0 chr2 113180206 . C . PASS END=113180236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:37:0,90,1350:0,111,255:40,0 chr2 113181817 . T . PASS END=113181884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:101:0,120,1800:0,245,255:40,0 chr2 113190959 . C . PASS END=113190979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1332:0,98,255:39,0 chr2 113190980 . A . PASS END=113190980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1160:0,70,255:36,0 chr2 113190981 . C . PASS END=113191012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1260:0,85,255:39,0 chr2 113191013 . G . PASS END=113191015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,117,255:26,0 chr2 113191016 . C . PASS END=113191026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,98,255:34,0 chr2 113191027 . T . PASS END=113191027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:31,0 chr2 113191028 . C . PASS END=113191029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 113191030 . T . PASS END=113191030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:31,0 chr2 113239922 . A . PASS END=113239945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,543:0,45,255:18,0 chr2 113239946 . G . PASS END=113240036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,705:0,60,255:23,0 chr2 113240037 . T . PASS END=113240058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,637:0,44,255:19,0 chr2 113240059 . G . PASS END=113240059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 113240060 . C . PASS END=113240061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 113240062 . G . PASS END=113240067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:12,0 chr2 113240068 . C . PASS END=113240078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr2 113243494 . G . PASS END=113243572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1143:0,85,255:40,0 chr2 113251720 . G . PASS END=113251722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 113251723 . A . PASS END=113251749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:26,0 chr2 113251750 . G . PASS END=113251759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1088:0,90,255:30,0 chr2 113251760 . T . PASS END=113251760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 113251761 . G . PASS END=113251912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1125:0,80,255:35,0 chr2 113251913 . G . PASS END=113251913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 113251914 . G . PASS END=113251918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 113251919 . G . PASS END=113251919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 113251920 . T . PASS END=113251930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 113251931 . A . PASS END=113251952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr2 113258783 . G . PASS END=113258787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 113258788 . G . PASS END=113258918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:29:0,81,983:0,87,255:40,0 chr2 113260489 . A . PASS END=113260510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,754:0,60,255:26,0 chr2 113260511 . C . PASS END=113260511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113260512 . A . PASS END=113260512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 113260513 . G . PASS END=113260523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:37,0 chr2 113260524 . A . PASS END=113260524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr2 113260525 . C . PASS END=113260728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:37:0,87,1305:0,98,255:40,0 chr2 113260729 . T . PASS END=113260731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr2 113260732 . C . PASS END=113260733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 113260734 . T . PASS END=113260735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr2 113260736 . C . PASS END=113260742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr2 113260743 . T . PASS END=113260758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,64,255:26,0 chr2 113277859 . G . PASS END=113277997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:92:35:0,92,1302:0,92,255:40,0 chr2 113277998 . G . PASS END=113278002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,100,255:26,0 chr2 113278799 . G . PASS END=113278802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr2 113278803 . G . PASS END=113278803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 113278804 . G . PASS END=113278810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:25:0,65,902:0,65,255:26,0 chr2 113278811 . C . PASS END=113278823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 113278824 . A . PASS END=113278858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,909:0,62,255:25,0 chr2 113278859 . T . PASS END=113278859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 113278860 . C . PASS END=113278860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113278861 . T . PASS END=113278861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 113278862 . C . PASS END=113278878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 113278879 . T . PASS END=113278883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 113286258 . G . PASS END=113286265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,77,255:26,0 chr2 113286266 . A . PASS END=113286372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:40:0,82,1410:0,82,255:40,0 chr2 113295720 . G . PASS END=113295744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,114,1751:0,114,255:40,0 chr2 113299729 . A . PASS END=113299729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr2 113299730 . T . PASS END=113299730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 113299731 . G . PASS END=113299739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 113299740 . A . PASS END=113299740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 113299741 . G . PASS END=113299743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:32,0 chr2 113299973 . G . PASS END=113299973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 113299974 . C . PASS END=113299984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:23,0 chr2 113299985 . G . PASS END=113299985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:21,0 chr2 113299986 . G . PASS END=113299993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 113299994 . C . PASS END=113299994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 113299995 . C . PASS END=113299995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113299996 . A . PASS END=113299996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 113299997 . C . PASS END=113299997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113299998 . T . PASS END=113299998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 113299999 . A . PASS END=113300012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,801:0,61,255:26,0 chr2 113300013 . C . PASS END=113300013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113300014 . C . PASS END=113300014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 113300015 . G . PASS END=113300017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 113300018 . A . PASS END=113300018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,842:0,64,255:26,0 chr2 113300019 . G . PASS END=113300035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,936:0,84,255:29,0 chr2 113300036 . T . PASS END=113300036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 113300037 . A . PASS END=113300047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:28,0 chr2 113300048 . G . PASS END=113300048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 113300049 . G . PASS END=113300069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1047:0,80,255:30,0 chr2 113300070 . A . PASS END=113300070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 113300071 . C . PASS END=113300083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr2 113300084 . A . PASS END=113300084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 113300085 . G . PASS END=113300091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 113300092 . G . PASS END=113300092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 113300093 . C . PASS END=113300100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1119:0,90,255:31,0 chr2 113300101 . G . PASS END=113300101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 113300102 . C . PASS END=113300112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 113300113 . T . PASS END=113300134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,953:0,62,255:26,0 chr2 113300135 . C . PASS END=113300136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,59,255:19,0 chr2 113300137 . C . PASS END=113300157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:62:21:0,62,762:0,62,255:22,0 chr2 113300158 . A . PASS END=113300160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr2 113300161 . G . PASS END=113300161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,720:0,11,255:17,0 chr2 113300162 . C . PASS END=113300201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,668:0,54,255:19,0 chr2 113300202 . A . PASS END=113300202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 113300203 . G . PASS END=113300216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr2 113300217 . C . PASS END=113300230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:12:0,36,390:0,36,255:12,0 chr2 113300231 . C . PASS END=113300231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 113300232 . T . PASS END=113300240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 113300241 . C . PASS END=113300248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:9,0 chr2 113304589 . G . PASS END=113304756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:48:0,112,1800:0,112,255:40,0 chr2 113304998 . G . PASS END=113304999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1364:0,98,255:34,0 chr2 113305000 . T . PASS END=113305000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1268:0,75,255:33,0 chr2 113305001 . G . PASS END=113305112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:43:0,96,1461:0,96,255:40,0 chr2 113305113 . A . PASS END=113305144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:39:0,90,1350:0,99,255:40,0 chr2 113306844 . G . PASS END=113306971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:40:0,90,1350:0,101,255:40,0 chr2 113306972 . G . PASS END=113306972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1380:0,73,255:27,0 chr2 113306973 . T . PASS END=113306976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:41:0,81,1215:0,93,255:30,0 chr2 113308443 . G . PASS END=113308478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,111,1665:0,114,255:40,0 chr2 113308479 . C . PASS END=113308515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,183,255:40,0 chr2 113308516 . T A, 257.67 PASS DP=70;MQ=249.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,34,0:0,36,0:208:295,211,0,2698,211,2698:255,211,0:0,0:2.5767e+02,2.0767e+02,0.0000e+00,4.5000e+02,2.4244e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,38:0,0,30,40 chr2 113308517 . G . PASS END=113308553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,161,255:40,0 chr2 113308554 . T . PASS END=113308579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,108,1620:0,110,255:40,0 chr2 113309352 . G . PASS END=113309361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,831:0,69,255:25,0 chr2 113309362 . G . PASS END=113309435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1260:0,90,255:40,0 chr2 113309436 . T . PASS END=113309472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,108,1522:0,117,255:40,0 chr2 113309473 . C T, 181.97 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,21,0:0,24,0:132:220,135,0,1695,135,1695:255,135,0:0,0:1.8197e+02,1.3197e+02,0.0000e+00,4.5000e+02,1.6674e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,23:0,0,30,15 chr2 113309474 . G . PASS END=113309510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,111,1621:0,111,255:40,0 chr2 113309511 . T . PASS END=113309575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:37:0,90,1344:0,90,255:40,0 chr2 113310222 . C . PASS END=113310231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1210:0,86,255:33,0 chr2 113310232 . T . PASS END=113310232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:32,0 chr2 113310233 . G . PASS END=113310243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1275:0,92,255:36,0 chr2 113310244 . A . PASS END=113310330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:36:0,82,1246:0,82,255:40,0 chr2 113310331 . C . PASS END=113310331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 113310332 . C . PASS END=113310361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,96,255:36,0 chr2 113310362 . C . PASS END=113310370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr2 113310371 . A . PASS END=113310371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:23,0 chr2 113310372 . G . PASS END=113310393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr2 113315487 . G . PASS END=113315658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:37:0,99,1232:0,109,255:40,0 chr2 113316870 . G . PASS END=113316887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 113316888 . A . PASS END=113316888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 113316889 . T . PASS END=113316896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1119:0,90,255:31,0 chr2 113316897 . T . PASS END=113316897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,851:0,59,255:29,0 chr2 113316898 . T . PASS END=113317052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1141:0,80,255:37,0 chr2 113317053 . G . PASS END=113317053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 113317054 . G . PASS END=113317059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 113317060 . C . PASS END=113317061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 113317062 . G . PASS END=113317071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 113317072 . G . PASS END=113317083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,74,255:26,0 chr2 113317084 . T . PASS END=113317084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,906:0,51,255:22,0 chr2 113317085 . G . PASS END=113317099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,68,255:25,0 chr2 113317100 . G . PASS END=113317100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 113317101 . T . PASS END=113317105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 113317106 . C . PASS END=113317108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 113317109 . T . PASS END=113317109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,413:0,18,255:16,0 chr2 113317110 . T . PASS END=113317125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:18:0,47,668:0,47,255:18,0 chr2 113317126 . T . PASS END=113317126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 113317127 . A . PASS END=113317134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 113317135 . T . PASS END=113317137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,559:0,34,255:13,0 chr2 113317138 . A . PASS END=113317151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 113321939 . C . PASS END=113321948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr2 113321949 . C . PASS END=113321962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:26,0 chr2 113321963 . G . PASS END=113321963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 113321964 . C . PASS END=113321965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113321966 . C . PASS END=113322076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1094:0,84,255:40,0 chr2 113325544 . G . PASS END=113325553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1189:0,105,255:36,0 chr2 113325554 . A . PASS END=113325554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1094:0,58,255:33,0 chr2 113325555 . G . PASS END=113325697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:30:0,80,1125:0,80,255:40,0 chr2 113325698 . T . PASS END=113325714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,972:0,70,255:26,0 chr2 113326323 . A . PASS END=113326464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1142:0,81,255:40,0 chr2 113326465 . A . PASS END=113326479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1233:0,89,255:35,0 chr2 113330139 . G . PASS END=113330310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:38:0,81,1184:0,81,255:40,0 chr2 113330311 . T . PASS END=113330311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1204:0,61,255:29,0 chr2 113330312 . G . PASS END=113330335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 113331139 . A . PASS END=113331151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,754:0,63,255:26,0 chr2 113331152 . C . PASS END=113331152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 113331153 . C . PASS END=113331154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 113331155 . C . PASS END=113331159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 113331160 . G . PASS END=113331160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 113331161 . A . PASS END=113331172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1052:0,87,255:31,0 chr2 113331173 . C . PASS END=113331173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 113331174 . C . PASS END=113331376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1158:0,96,255:40,0 chr2 113331377 . T . PASS END=113331392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,77,255:26,0 chr2 113332424 . G . PASS END=113333306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:89:36:0,89,1258:0,89,255:40,0 chr2 113342225 . A . PASS END=113342226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:32,0 chr2 113343551 . G . PASS END=113343554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 113343555 . G . PASS END=113343558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113343559 . C . PASS END=113343572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,673:0,41,255:19,0 chr2 113343573 . G . PASS END=113343590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:24,0 chr2 113343591 . G . PASS END=113343591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:23,0 chr2 113343592 . A . PASS END=113343600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,986:0,78,255:26,0 chr2 113343601 . A . PASS END=113343618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1280:0,96,255:36,0 chr2 113343619 . C . PASS END=113343619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:35,0 chr2 113343620 . G . PASS END=113343660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1343:0,81,255:38,0 chr2 113343661 . A . PASS END=113343663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:38:0,62,1335:0,62,255:35,0 chr2 113343664 . T . PASS END=113343675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1175:0,94,255:37,0 chr2 113343676 . A . PASS END=113343676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1260:0,72,255:32,0 chr2 113343677 . G . PASS END=113343690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1339:0,81,255:34,0 chr2 113343691 . A . PASS END=113343691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1162:0,75,255:29,0 chr2 113343692 . G . PASS END=113343695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1310:0,92,255:32,0 chr2 113343777 . C . PASS END=113343783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1241:0,89,255:34,0 chr2 113343784 . A . PASS END=113343784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr2 113343785 . T . PASS END=113343809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1239:0,86,255:36,0 chr2 113343810 . T . PASS END=113343812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:36,0 chr2 113343813 . G . PASS END=113343865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,99,255:39,0 chr2 113343866 . A . PASS END=113343868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 113343869 . G . PASS END=113343871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 113343872 . C . PASS END=113343909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,900:0,62,255:26,0 chr2 113343910 . G . PASS END=113343914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:27,0 chr2 113343915 . G . PASS END=113343942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,939:0,64,255:26,0 chr2 113343943 . G . PASS END=113343943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 113343944 . T . PASS END=113343952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr2 113343953 . C . PASS END=113343953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr2 113343954 . T . PASS END=113343959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 113343960 . C . PASS END=113343960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:21,0 chr2 113343961 . A . PASS END=113343961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 113343962 . G . PASS END=113343962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:20,0 chr2 113343963 . T . PASS END=113343964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 113343965 . C . PASS END=113343967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,829:0,55,255:21,0 chr2 113343968 . C . PASS END=113343968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 113343969 . T . PASS END=113343969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,688:0,19,255:19,0 chr2 113343970 . C . PASS END=113343971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 113343972 . T . PASS END=113343973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 113343974 . T . PASS END=113343975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:22:0,33,715:0,33,255:21,0 chr2 113343976 . T . PASS END=113343977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 113343978 . C . PASS END=113343978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 113343979 . A . PASS END=113343980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 113343981 . A . PASS END=113343982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113343983 . C . PASS END=113343983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 113343984 . A . PASS END=113343984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 113343985 . T . PASS END=113343986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,807:0,41,255:22,0 chr2 113343987 . C . PASS END=113343989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 113343990 . T . PASS END=113343990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,682:0,22,255:21,0 chr2 113343991 . T . PASS END=113343991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 113343992 . C . PASS END=113343993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:23,0 chr2 113343994 . T . PASS END=113343994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,745:0,17,255:22,0 chr2 113343995 . C . PASS END=113343995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 113343996 . C . PASS END=113343996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113343997 . T . PASS END=113344001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:22,0 chr2 113344002 . G . PASS END=113344002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113344003 . T . PASS END=113344003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 113344004 . T . PASS END=113344004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113344005 . G . PASS END=113344005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 113344006 . T . PASS END=113344007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113344008 . C . PASS END=113344008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 113344009 . A . PASS END=113344009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 113344010 . G . PASS END=113344010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 113344011 . G . PASS END=113344012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 113344013 . T . PASS END=113344013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:20,0 chr2 113344014 . A . PASS END=113344019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:23:0,41,808:0,41,255:19,0 chr2 113344020 . T . PASS END=113344020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,601:0,18,255:18,0 chr2 113344021 . T . PASS END=113344023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 113344024 . G . PASS END=113344026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 113344027 . T . PASS END=113344027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 113344028 . C . PASS END=113344029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 113344030 . T . PASS END=113344030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 113344031 . C . PASS END=113344031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 113344032 . C . PASS END=113344032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 113344033 . T . PASS END=113344035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 113344036 . G . PASS END=113344037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:33:22:0,33,742:0,33,255:17,0 chr2 113344038 . C . PASS END=113344039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 113344040 . C . PASS END=113344041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 113344042 . C . PASS END=113344046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,810:0,53,255:18,0 chr2 113344047 . T C, 116.22 PASS DP=23;MQ=249.74;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,15,0:0,8,0:66:154,69,0,885,69,885:255,75,0:0,0:1.1622e+02,6.6222e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,15:0,0,14,9 chr2 113344048 . C . PASS END=113344065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 113344066 . C . PASS END=113344066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 113344067 . A . PASS END=113344075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 113344076 . G . PASS END=113344084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 113344085 . A . PASS END=113344086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 113344087 . A . PASS END=113344087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,629:0,21,255:19,0 chr2 113344088 . T . PASS END=113344098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,615:0,57,255:19,0 chr2 113344099 . T . PASS END=113344110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:16:0,36,540:0,48,255:12,0 chr2 113346443 . G . PASS END=113346450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 113346451 . A . PASS END=113346458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1180:0,90,255:31,0 chr2 113346459 . C . PASS END=113346459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 113346460 . C . PASS END=113346464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:30,0 chr2 113346465 . G . PASS END=113346465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr2 113346466 . A . PASS END=113346466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 113404406 . A . PASS END=113404463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1155:0,80,255:40,0 chr2 113404464 . A . PASS END=113404464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1293:0,71,255:40,0 chr2 113404465 . C . PASS END=113404475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:88:46:0,88,1355:0,88,255:40,0 chr2 113404476 . T . PASS END=113404476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:53:49:0,53,1516:0,53,255:40,0 chr2 113404477 . G . PASS END=113404478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:69:47:0,69,1389:0,69,255:40,0 chr2 113404479 . T . PASS END=113404670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:94:45:0,94,1540:0,94,255:40,0 chr2 113404671 . T . PASS END=113404707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,143,255:40,0 chr2 113404708 . G A, 206.05 PASS DP=53;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,22,0:0,31,0:156:244,159,0,2002,159,2002:255,159,0:0,0:2.0605e+02,1.5605e+02,0.0000e+00,4.5000e+02,1.9082e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,29:0,0,21,32 chr2 113404709 . C . PASS END=113404739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:35:0,89,1257:0,89,255:40,0 chr2 113404901 . G . PASS END=113405038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:34:0,90,1286:0,93,255:40,0 chr2 113405039 . T . PASS END=113405039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr2 113405040 . T . PASS END=113405041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr2 113405230 . T . PASS END=113405315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,189,255:40,0 chr2 113410279 . G . PASS END=113410375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:37:0,95,1355:0,95,255:40,0 chr2 113410466 . G . PASS END=113410486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1186:0,86,255:32,0 chr2 113410487 . G . PASS END=113410506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 113410507 . A . PASS END=113410507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 113410508 . G . PASS END=113410511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 113410512 . G . PASS END=113410528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr2 113410529 . G . PASS END=113410533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 113414699 . T . PASS END=113414805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:35:0,80,1302:0,80,255:40,0 chr2 113414806 . A . PASS END=113414806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1195:0,77,255:34,0 chr2 113414807 . G . PASS END=113414811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:35,0 chr2 113414812 . A . PASS END=113414812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:31,0 chr2 113414813 . T . PASS END=113414818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:33,0 chr2 113416402 . G . PASS END=113416605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:33:0,96,1440:0,99,255:40,1 chr2 113416606 . C . PASS END=113416606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:43:53:0,43,1798:0,43,255:40,4 chr2 113416607 . A . PASS END=113416607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:7:54:0,7,1674:0,7,255:40,4 chr2 113416608 . G . PASS END=113416608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:26:55:0,26,1808:0,26,255:40,4 chr2 113416609 . A . PASS END=113416609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:13:54:0,13,1696:0,13,255:40,0 chr2 113416610 . G . PASS END=113416671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,102,1503:0,109,255:40,0 chr2 113416781 . G . PASS END=113417018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:92:33:0,92,1227:0,92,255:40,0 chr2 113417019 . T . PASS END=113417019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:64:53:0,64,1553:0,64,255:40,0 chr2 113417020 . C . PASS END=113417218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:37:0,80,1365:0,80,255:40,0 chr2 113417219 . G . PASS END=113417219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr2 113417220 . T . PASS END=113417236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:98:34:0,98,1402:0,98,255:36,0 chr2 113417237 . A . PASS END=113417237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:31,0 chr2 113417238 . A . PASS END=113417245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr2 113417246 . A . PASS END=113417260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:27:0,60,900:0,81,255:26,0 chr2 113417261 . A . PASS END=113417273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,698:0,46,255:19,0 chr2 113417274 . C . PASS END=113417274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:17,0 chr2 113417275 . T . PASS END=113417304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 113417305 . T . PASS END=113417305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:12,0 chr2 113417306 . T . PASS END=113417310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 113417311 . T . PASS END=113417335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,443:0,39,255:13,0 chr2 113417336 . T . PASS END=113417336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 113417337 . A . PASS END=113417339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 113417964 . C . PASS END=113418131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1191:0,86,255:40,0 chr2 113418132 . A . PASS END=113418136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 113418137 . T . PASS END=113418137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr2 113418138 . C . PASS END=113418145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr2 113418146 . C . PASS END=113418149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:18,0 chr2 113418719 . T . PASS END=113418803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:97:37:0,97,1297:0,97,255:40,0 chr2 113420441 . G . PASS END=113420591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:35:0,87,1305:0,99,255:40,0 chr2 113420592 . T . PASS END=113420592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:29,0 chr2 113420593 . C . PASS END=113420593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 113420594 . A . PASS END=113420594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:28,0 chr2 113420595 . G . PASS END=113420602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1202:0,86,255:30,0 chr2 113476759 . A . PASS END=113476760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 113478657 . A . PASS END=113478663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 113478664 . G . PASS END=113478688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,771:0,66,255:24,0 chr2 113478689 . A . PASS END=113478689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 113478690 . C . PASS END=113478694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 113478695 . C . PASS END=113478695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,692:0,36,255:19,0 chr2 113478696 . T . PASS END=113478711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:21,0 chr2 113478712 . A . PASS END=113478730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 113479114 . A . PASS END=113479116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 113479117 . C . PASS END=113479141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,721:0,60,255:24,0 chr2 113479142 . T . PASS END=113479142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 113479143 . G . PASS END=113479157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr2 113479158 . C . PASS END=113479163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:32,0 chr2 113479164 . T . PASS END=113479164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1156:0,68,255:31,0 chr2 113479165 . G . PASS END=113479165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr2 113479166 . C . PASS END=113479166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1108:0,41,255:30,0 chr2 113479167 . A . PASS END=113479226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1202:0,89,255:35,0 chr2 113479227 . A . PASS END=113479250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,64,255:27,0 chr2 113479251 . T . PASS END=113479251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 113479252 . G . PASS END=113479292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 113479293 . G . PASS END=113479308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:18,0 chr2 113479309 . T . PASS END=113479314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr2 113479315 . G . PASS END=113479347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,604:0,48,255:19,0 chr2 113479348 . C . PASS END=113479349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 113479350 . G . PASS END=113479350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 113479351 . G . PASS END=113479352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 113479353 . G . PASS END=113479356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 113479357 . T . PASS END=113479374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 113479375 . A . PASS END=113479375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 113479376 . T . PASS END=113479381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 113479382 . T . PASS END=113479382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:22,0 chr2 113479383 . C . PASS END=113479383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113479384 . T . PASS END=113479384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,709:0,55,255:22,0 chr2 113479385 . C . PASS END=113479396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:25,0 chr2 113479397 . T . PASS END=113479397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr2 113479398 . T . PASS END=113479405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,886:0,75,255:26,0 chr2 113479406 . A . PASS END=113479410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113479411 . A . PASS END=113479411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113479412 . G . PASS END=113479419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113479420 . C . PASS END=113479446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,919:0,75,255:26,0 chr2 113479447 . G . PASS END=113479449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 113479450 . A . PASS END=113479468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,900:0,72,255:24,0 chr2 113479563 . C . PASS END=113479567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1096:0,87,255:30,0 chr2 113479568 . A . PASS END=113479568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 113479569 . A . PASS END=113479644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1111:0,80,255:35,0 chr2 113479645 . C . PASS END=113479647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 113479648 . G . PASS END=113479651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 113479652 . T . PASS END=113479676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:24,0 chr2 113479677 . C . PASS END=113479677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 113479678 . C . PASS END=113479678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113479679 . A . PASS END=113479679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 113479680 . G . PASS END=113479680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113479760 . G . PASS END=113479782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,925:0,65,255:26,0 chr2 113479783 . A . PASS END=113479785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113479786 . G . PASS END=113479791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 113479792 . T . PASS END=113479800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 113479801 . T . PASS END=113479801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 113479802 . G . PASS END=113479804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 113479805 . C . PASS END=113479814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr2 113479815 . A . PASS END=113479815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 113479816 . A . PASS END=113479827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,978:0,78,255:26,0 chr2 113479828 . G . PASS END=113479828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 113479829 . T . PASS END=113479829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 113479830 . G . PASS END=113479833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 113479834 . A . PASS END=113479855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,970:0,78,255:26,0 chr2 113480060 . C . PASS END=113480142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,122,255:40,0 chr2 113480143 . T . PASS END=113480143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1653:0,67,255:40,0 chr2 113480144 . C . PASS END=113480166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:44:0,120,1800:0,127,255:40,0 chr2 113480291 . A . PASS END=113480348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,114,1698:0,114,255:40,0 chr2 113480658 . T . PASS END=113480751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1327:0,90,255:40,0 chr2 113480995 . G . PASS END=113481045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:89:43:0,89,1548:0,89,255:40,0 chr2 113481296 . C . PASS END=113481322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr2 113481323 . A . PASS END=113481323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:29,0 chr2 113481324 . T . PASS END=113481338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr2 113481339 . A . PASS END=113481339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr2 113481340 . A . PASS END=113481340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 113481341 . G . PASS END=113481341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr2 113481342 . T . PASS END=113481350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1117:0,93,255:31,0 chr2 113481351 . C . PASS END=113481351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 113481352 . C . PASS END=113481365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,90,255:31,0 chr2 113481366 . A . PASS END=113481370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr2 113481371 . T . PASS END=113481375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 113481376 . C . PASS END=113481379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,955:0,67,255:25,0 chr2 113481671 . G . PASS END=113481676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,825:0,69,255:24,0 chr2 113481677 . A . PASS END=113481677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 113481678 . T . PASS END=113481679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 113481680 . A . PASS END=113481680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,890:0,26,255:25,0 chr2 113481681 . C . PASS END=113481681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 113481682 . C . PASS END=113481682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 113481683 . T . PASS END=113481685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,901:0,45,255:27,0 chr2 113481686 . C . PASS END=113481686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,870:0,29,255:25,0 chr2 113481687 . T . PASS END=113481688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113481689 . T . PASS END=113481691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:26,0 chr2 113481692 . A . PASS END=113481692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,878:0,15,255:25,0 chr2 113481693 . G . PASS END=113481693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113481694 . C . PASS END=113481694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,864:0,29,255:25,0 chr2 113481695 . A . PASS END=113481699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,903:0,45,255:27,0 chr2 113481700 . T . PASS END=113481700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 113481701 . G . PASS END=113481701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,922:0,29,255:26,0 chr2 113481702 . A . PASS END=113481703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr2 113482167 . G . PASS END=113482169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 113482170 . C . PASS END=113482170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:30,0 chr2 113482171 . T . PASS END=113482173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 113482174 . T . PASS END=113482174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1124:0,44,255:29,0 chr2 113482175 . G . PASS END=113482177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 113482178 . C . PASS END=113482178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 113482179 . A . PASS END=113482187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 113482343 . G . PASS END=113482480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1260:0,92,255:40,0 chr2 113482481 . G . PASS END=113482483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 113482751 . G . PASS END=113482758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,588:0,48,255:16,0 chr2 113482759 . A . PASS END=113482759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 113482760 . A . PASS END=113482778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:17,0 chr2 113482779 . A C, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,4,0:0,15,0:54:142,57,0,735,57,735:255,60,0:0,0:1.0418e+02,5.4184e+01,1.6567e-05,4.5000e+02,8.8954e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,9:0,0,11,8 chr2 113482780 . C . PASS END=113482789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,698:0,44,255:18,0 chr2 113482790 . C . PASS END=113482810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:22,0 chr2 113482811 . T . PASS END=113482811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 113482812 . C . PASS END=113482812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 113482813 . T . PASS END=113482813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 113482814 . G . PASS END=113482816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr2 113482817 . G . PASS END=113482817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 113482959 . G . PASS END=113482964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr2 113482965 . C . PASS END=113482965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 113482966 . G . PASS END=113482974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,881:0,78,255:26,0 chr2 113482975 . G . PASS END=113482979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 113482980 . A . PASS END=113482994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,947:0,65,255:26,0 chr2 113482995 . G . PASS END=113482995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 113482996 . G . PASS END=113483005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 113483006 . A . PASS END=113483015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr2 113483016 . T . PASS END=113483016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:27,0 chr2 113483017 . T . PASS END=113483018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 113483019 . G . PASS END=113483019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 113483020 . G . PASS END=113483020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr2 113483021 . G . PASS END=113483031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 113483032 . T . PASS END=113483033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 113483034 . G . PASS END=113483034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 113483035 . G . PASS END=113483035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 113483036 . G . PASS END=113483084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,994:0,80,255:33,0 chr2 113483085 . T . PASS END=113483087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1139:0,77,255:26,0 chr2 113483088 . C . PASS END=113483088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113483089 . T . PASS END=113483089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:25,0 chr2 113483090 . G . PASS END=113483092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113483093 . C . PASS END=113483094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 113483095 . G . PASS END=113483099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 113483100 . G . PASS END=113483129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr2 113483815 . A . PASS END=113483838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:35:0,94,1167:0,94,255:36,0 chr2 113483839 . T . PASS END=113483839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:33,0 chr2 113483840 . G . PASS END=113483850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1241:0,89,255:35,0 chr2 113483851 . T . PASS END=113483851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:35,0 chr2 113483852 . G . PASS END=113483862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1236:0,92,255:35,0 chr2 113483863 . A . PASS END=113483863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1091:0,77,255:30,0 chr2 113483864 . C . PASS END=113483866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:32,0 chr2 113484255 . G . PASS END=113484281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,122,255:40,0 chr2 113484282 . G . PASS END=113484315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:39:0,96,1440:0,107,255:40,0 chr2 113487204 . A . PASS END=113487267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1368:0,81,255:40,0 chr2 113487268 . C . PASS END=113487269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:32,0 chr2 113487270 . T . PASS END=113487270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 113487271 . G . PASS END=113487272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:32,0 chr2 113487273 . A . PASS END=113487273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 113487274 . A . PASS END=113487275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:72:37:0,72,1327:0,72,255:33,0 chr2 113487276 . C . PASS END=113487277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:34,0 chr2 113487278 . G . PASS END=113487278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1210:0,39,255:32,0 chr2 113487279 . A . PASS END=113487279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1199:0,69,255:31,0 chr2 113487280 . G . PASS END=113487281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 113488658 . G . PASS END=113488658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 113488659 . G . PASS END=113488659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:35,0 chr2 113488660 . T . PASS END=113488752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1148:0,82,255:39,0 chr2 113488753 . A . PASS END=113488753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 113491136 . C . PASS END=113491139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:16,0 chr2 113491140 . C . PASS END=113491140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 113491141 . T . PASS END=113491145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 113491146 . A . PASS END=113491146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 113491147 . G . PASS END=113491150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 113496400 . T . PASS END=113496401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 113496402 . A . PASS END=113496402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,778:0,38,255:22,0 chr2 113496403 . T . PASS END=113496412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,825:0,64,255:26,0 chr2 113496413 . G . PASS END=113496422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:30,0 chr2 113496423 . C . PASS END=113496423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 113496424 . C . PASS END=113496571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:33:0,82,1052:0,82,255:40,0 chr2 113496572 . C . PASS END=113496578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,83,255:25,0 chr2 113496579 . C . PASS END=113496619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:19,0 chr2 113496620 . T . PASS END=113496620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:11,0 chr2 113496621 . T . PASS END=113496625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,565:0,32,255:13,0 chr2 113498097 . C . PASS END=113498221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:37:0,94,1244:0,94,255:40,0 chr2 113498222 . G . PASS END=113498222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:38:46:0,38,1242:0,38,255:39,0 chr2 113498223 . G . PASS END=113498249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,100,1575:0,100,255:40,0 chr2 113498395 . C . PASS END=113498528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:98:35:0,98,1304:0,98,255:40,0 chr2 113498529 . C . PASS END=113498543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,105,255:35,0 chr2 113498544 . T . PASS END=113498545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr2 113498546 . T . PASS END=113498548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 113498549 . T . PASS END=113498550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 113498551 . C . PASS END=113498551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 113498552 . T . PASS END=113498552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr2 113498553 . A . PASS END=113498556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 113498557 . T . PASS END=113498565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,953:0,65,255:26,0 chr2 113498566 . A G, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,11,0:0,16,0:78:166,81,0,1031,81,1031:255,81,0:0,0:1.2826e+02,7.8256e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,21:0,0,14,13 chr2 113498567 . A . PASS END=113498568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,67,255:22,0 chr2 113498569 . G . PASS END=113498579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,55,255:19,0 chr2 113498580 . A . PASS END=113498580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:14,0 chr2 113498581 . A . PASS END=113498584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,630:0,41,255:15,0 chr2 113499989 . T . PASS END=113500027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,112,1775:0,112,255:40,0 chr2 113500282 . C . PASS END=113500346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,147,255:40,0 chr2 113503997 . T . PASS END=113504152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:43:0,114,1628:0,116,255:40,0 chr2 113509844 . C . PASS END=113510013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,4:65:81:28:0,81,1055:0,84,255:40,3 chr2 113510014 . T . PASS END=113510014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,4:63:68:63:0,68,1918:0,68,255:40,3 chr2 113510015 . T . PASS END=113510051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,131,255:40,1 chr2 113513551 . T . PASS END=113513551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 113513554 . C . PASS END=113513555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 113513556 . T . PASS END=113513556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 113513557 . C . PASS END=113513560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr2 113513561 . C . PASS END=113513566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,762:0,63,255:25,0 chr2 113513567 . C . PASS END=113513567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 113513568 . T . PASS END=113513576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,856:0,61,255:26,0 chr2 113513577 . C . PASS END=113513578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 113513579 . T . PASS END=113513589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,917:0,64,255:26,0 chr2 113513590 . G . PASS END=113513596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 113513597 . T . PASS END=113513597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr2 113513598 . T . PASS END=113513602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 113513603 . T . PASS END=113513604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:30:0,76,965:0,76,255:28,0 chr2 113513605 . C . PASS END=113513624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1172:0,83,255:36,0 chr2 113513625 . A . PASS END=113513625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:32,0 chr2 113513626 . G . PASS END=113513634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1227:0,88,255:34,0 chr2 113513635 . T . PASS END=113513635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:33,0 chr2 113513636 . T . PASS END=113513642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1242:0,102,255:34,0 chr2 113513643 . T . PASS END=113513643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr2 113513644 . G . PASS END=113513734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1405:0,104,255:40,0 chr2 113513735 . T . PASS END=113513735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1374:0,79,255:36,0 chr2 113513736 . A . PASS END=113513787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,105,1491:0,107,255:40,0 chr2 113513788 . T . PASS END=113513824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,116,1544:0,116,255:40,0 chr2 113513825 . T C, 212.06 PASS DP=56;MQ=250.00;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,30,0:0,25,0:162:250,165,0,2079,165,2079:255,168,0:0,0:2.1206e+02,1.6206e+02,0.0000e+00,4.5000e+02,1.9683e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,25:0,0,27,28 chr2 113513826 . G . PASS END=113513862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,158,255:40,0 chr2 113513863 . A . PASS END=113514780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:31:0,80,1141:0,80,255:40,0 chr2 113514781 . G . PASS END=113514791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:25,0 chr2 113518290 . A . PASS END=113518341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:87:0,120,1800:0,228,255:40,0 chr2 113520080 . T . PASS END=113520146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,120,1800:0,123,255:40,0 chr2 113522139 . C . PASS END=113522166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 113522167 . C . PASS END=113522175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr2 113529240 . T C, 57.00 PASS DP=3;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,3,0:1.000,0.000:3:0,2,0:0,1,0:7:94,9,0,116,9,116:116,9,0:0,0:5.6997e+01,6.9969e+00,9.6769e-01,1.1424e+02,4.1767e+01,1.1724e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,2:0,0,2,1:113529210 chr2 113532644 . C . PASS END=113532844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:35:0,82,1305:0,82,255:40,1 chr2 113535564 . C . PASS END=113535688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:48:0,114,1783:0,114,255:40,0 chr2 113537073 . C . PASS END=113537185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:87:40:0,87,1356:0,87,255:40,0 chr2 113537186 . A . PASS END=113537222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:63:0,120,1800:0,179,255:40,0 chr2 113537223 . C A, 235.69 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,35,0:0,28,0:186:273,189,0,2373,189,2373:255,189,0:0,0:2.3569e+02,1.8569e+02,0.0000e+00,4.5000e+02,2.2046e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,41:0,0,38,25 chr2 113537224 . T . PASS END=113537243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,120,1800:0,121,255:40,0 chr2 113539181 . C . PASS END=113539384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:88:33:0,88,1158:0,88,255:40,0 chr2 113539385 . T . PASS END=113539385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:30,0 chr2 113539386 . T . PASS END=113539398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1225:0,86,255:31,0 chr2 113539399 . G . PASS END=113539400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1041:0,41,255:29,0 chr2 113539401 . T . PASS END=113539403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:65:31:0,65,1094:0,65,255:29,0 chr2 113540293 . C . PASS END=113540341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:104:0,120,1800:0,255,255:40,0 chr2 113541301 . C . PASS END=113541347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,199,255:40,0 chr2 113587938 . T . PASS END=113588150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:37:0,101,1166:0,101,255:40,0 chr2 113588869 . C . PASS END=113588871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,1000:0,78,255:26,0 chr2 113588872 . C . PASS END=113588991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:30:0,87,1147:0,90,255:40,0 chr2 113588992 . G . PASS END=113588992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:28,0 chr2 113588993 . A . PASS END=113588999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1180:0,85,255:29,0 chr2 113590239 . C . PASS END=113590246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr2 113590247 . T . PASS END=113590251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:24,0 chr2 113590252 . A . PASS END=113590252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,792:0,41,255:23,0 chr2 113590253 . T . PASS END=113590258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 113590259 . C . PASS END=113590259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:23,0 chr2 113590260 . C . PASS END=113590274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,879:0,75,255:26,0 chr2 113590275 . C . PASS END=113590348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:27:0,80,936:0,80,255:38,0 chr2 113590349 . A . PASS END=113590349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1216:0,58,255:30,0 chr2 113590350 . C . PASS END=113590350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 113590351 . A . PASS END=113590351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1163:0,55,255:29,0 chr2 113590352 . G . PASS END=113590352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:29,0 chr2 113590353 . G . PASS END=113590370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1164:0,83,255:33,0 chr2 113590371 . C . PASS END=113590371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:29,0 chr2 113590372 . C . PASS END=113590373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr2 113590374 . C . PASS END=113590374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1194:0,71,255:28,0 chr2 113590375 . G . PASS END=113590382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1133:0,80,255:29,0 chr2 113590383 . A . PASS END=113590384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1016:0,71,255:28,0 chr2 113590385 . G . PASS END=113590388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113590389 . C . PASS END=113590389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 113590390 . G A, 134.28 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,15,0:0,14,0:84:172,87,0,1124,87,1124:255,87,0:0,0:1.3428e+02,8.4282e+01,0.0000e+00,4.5000e+02,1.1905e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,20:0,0,17,12 chr2 113590391 . A . PASS END=113590401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,64,255:25,0 chr2 113590402 . T . PASS END=113590402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:20,0 chr2 113590403 . T . PASS END=113590403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 113590951 . C . PASS END=113590954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 113590955 . T . PASS END=113590983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,444:0,42,255:18,0 chr2 113590984 . G . PASS END=113590989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:22,0 chr2 113590990 . T . PASS END=113590990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:21,0 chr2 113590991 . C . PASS END=113591008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr2 113591009 . G . PASS END=113591011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 113591012 . G . PASS END=113591013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113591014 . G . PASS END=113591096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:29:0,83,1178:0,83,255:40,0 chr2 113591097 . A . PASS END=113591097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1366:0,71,255:38,0 chr2 113591098 . T . PASS END=113591134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1352:0,90,255:40,0 chr2 113591135 . C . PASS END=113591135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:29,0 chr2 113591136 . A . PASS END=113591150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:33,0 chr2 113591151 . C . PASS END=113591152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:33:0,75,1125:0,82,255:26,0 chr2 113593143 . C . PASS END=113593194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,156,255:40,0 chr2 113593760 . C . PASS END=113593803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1164:0,93,255:34,0 chr2 113593804 . C . PASS END=113593805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:32,0 chr2 113593806 . T . PASS END=113593806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 113594387 . G A, 170.38 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,15,0:0,26,0:120:208,123,0,1549,123,1549:255,123,0:0,0:1.7038e+02,1.2038e+02,0.0000e+00,4.5000e+02,1.5515e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,24:0,0,19,22 chr2 113594867 . A G, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,5,0:0,10,0:42:130,45,0,582,45,582:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,11:0,0,10,5 chr2 113595829 . C . PASS END=113595829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 113598107 . G . PASS END=113598107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 113598255 . C . PASS END=113598255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 113602559 . A G, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,16,0:0,12,0:81:169,84,0,1085,84,1085:255,84,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,15:0,0,13,15 chr2 113670590 . A . PASS END=113670671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:58:0,120,1800:0,158,255:40,1 chr2 113671369 . A . PASS END=113671431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:33:0,92,1205:0,92,255:40,0 chr2 113672770 . A . PASS END=113672836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:38:0,85,1411:0,85,255:40,0 chr2 113674706 . G . PASS END=113674825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:41:0,93,1395:0,106,255:40,0 chr2 113675212 . A . PASS END=113675214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:27,0 chr2 113675215 . T . PASS END=113675217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113675218 . T . PASS END=113675222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113675223 . G . PASS END=113675223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 113675224 . C . PASS END=113675307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1041:0,87,255:37,0 chr2 113675308 . A . PASS END=113675340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,738:0,63,255:26,0 chr2 113675341 . C . PASS END=113675354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,690:0,44,255:19,0 chr2 113676138 . A . PASS END=113676159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,925:0,62,255:26,0 chr2 113676160 . C . PASS END=113676161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113676162 . G . PASS END=113676162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr2 113676163 . C . PASS END=113676163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 113676164 . C . PASS END=113676166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 113676167 . A . PASS END=113676167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 113676168 . A . PASS END=113676195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:29:0,83,1019:0,83,255:37,0 chr2 113676196 . T . PASS END=113676196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1327:0,73,255:35,0 chr2 113676197 . T . PASS END=113676370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:83:39:0,83,1260:0,83,255:40,0 chr2 113676371 . T . PASS END=113676386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr2 113736216 . A . PASS END=113736270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,141,255:40,0 chr2 113736798 . T . PASS END=113736902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,930:0,80,255:40,0 chr2 113737586 . T . PASS END=113737586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:28,0 chr2 113737587 . C . PASS END=113737725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:30:0,90,1133:0,90,255:40,0 chr2 113742417 . G . PASS END=113742417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 113742418 . A . PASS END=113742420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr2 113742421 . A . PASS END=113742421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,953:0,10,255:27,0 chr2 113742422 . G . PASS END=113742422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:30,0 chr2 113742423 . A . PASS END=113742424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,892:0,54,255:30,0 chr2 113742425 . G . PASS END=113742425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:30,0 chr2 113742426 . A . PASS END=113742426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,978:0,27,255:28,0 chr2 113742427 . T . PASS END=113742624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:32:0,81,1202:0,83,255:40,0 chr2 113742625 . G . PASS END=113742626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 113763449 . A . PASS END=113763458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,119,1800:0,119,255:40,0 chr2 113763551 . C . PASS END=113763574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1371:0,84,255:39,0 chr2 113763575 . A G, 172.93 PASS DP=42;MQ=249.51;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,21,0:0,21,0:123:211,126,0,311,311,311:255,129,0:0,0:1.7293e+02,1.2293e+02,0.0000e+00,3.0770e+02,3.4247e+02,3.1071e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,28:0,0,23,19 chr2 113763576 . G . PASS END=113763612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:38:0,82,1364:0,82,255:37,0 chr2 113763613 . C . PASS END=113763664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1227:0,91,255:38,0 chr2 113764175 . T . PASS END=113764314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:85:38:0,85,1433:0,85,255:40,0 chr2 113765409 . G . PASS END=113765411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr2 113765412 . A . PASS END=113765413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 113765414 . G . PASS END=113765416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 113765417 . T . PASS END=113765417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 113765418 . A . PASS END=113765423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 113765424 . G . PASS END=113765430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,699:0,49,255:19,0 chr2 113765431 . A . PASS END=113765445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr2 113765446 . C . PASS END=113765447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 113765448 . G . PASS END=113765462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 113765463 . T . PASS END=113765463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 113765464 . T . PASS END=113765473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,976:0,65,255:25,0 chr2 113765474 . C . PASS END=113765476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 113765477 . G . PASS END=113765477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 113765478 . A . PASS END=113765479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 113765480 . T . PASS END=113765480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 113765481 . G . PASS END=113765483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 113765484 . A . PASS END=113765486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113765487 . A . PASS END=113765489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113765490 . T . PASS END=113765493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1006:0,68,255:26,0 chr2 113765494 . C . PASS END=113765503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1037:0,84,255:28,0 chr2 113765504 . T . PASS END=113765506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 113765507 . G . PASS END=113765507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 113765508 . G . PASS END=113765508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 113765509 . C . PASS END=113765531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 113765532 . G . PASS END=113765536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 113765537 . C . PASS END=113765537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113765538 . T . PASS END=113765569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr2 113765570 . A . PASS END=113765570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:22,0 chr2 113765571 . G . PASS END=113765580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 113765581 . A . PASS END=113765583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 113765584 . C . PASS END=113765596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:21,0 chr2 113765597 . C . PASS END=113765597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 113765598 . T . PASS END=113765612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr2 113765613 . C . PASS END=113765621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 113780251 . C . PASS END=113780354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:94:35:0,94,1266:0,94,255:40,0 chr2 113783678 . A . PASS END=113783678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 113783680 . C . PASS END=113783696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,709:0,60,255:26,0 chr2 113783697 . T . PASS END=113783705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,956:0,81,255:32,0 chr2 113783706 . G . PASS END=113783719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:33,0 chr2 113783720 . G . PASS END=113783720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr2 113783721 . C . PASS END=113783742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:36:0,97,1192:0,97,255:39,0 chr2 113783743 . T C, 167.39 PASS DP=40;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,21,0:0,19,0:117:205,120,0,1551,120,1551:255,120,0:0,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,20:0,0,25,15 chr2 113783744 . G . PASS END=113783780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:37:0,90,1350:0,111,255:40,0 chr2 113783781 . T . PASS END=113783786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:30,0 chr2 113783787 . A . PASS END=113783787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1078:0,54,255:25,0 chr2 113783788 . T . PASS END=113783809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,953:0,62,255:25,0 chr2 113785480 . T . PASS END=113785491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:29,0 chr2 113785492 . A . PASS END=113785492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,992:0,13,255:28,0 chr2 113785493 . T . PASS END=113785684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:30:0,90,1088:0,90,255:40,2 chr2 113785685 . T . PASS END=113785685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1520:0,63,255:39,2 chr2 113785686 . T . PASS END=113785689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:43:0,90,1529:0,90,255:39,0 chr2 113785690 . T . PASS END=113785692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:42:0,94,1550:0,94,255:40,0 chr2 113786516 . C . PASS END=113786655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:38:0,96,1440:0,98,255:40,0 chr2 113788625 . C . PASS END=113788732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:34:0,93,1395:0,102,255:40,0 chr2 113789274 . G . PASS END=113789278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 113789279 . G . PASS END=113789286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,209,255:40,0 chr2 113816671 . G . PASS END=113816671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 113816690 . G . PASS END=113816690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 113816799 . G . PASS END=113816799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 113816819 . G . PASS END=113816819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 113817016 . A . PASS END=113817044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:94:37:0,94,1280:0,94,255:39,0 chr2 113817049 . G . PASS END=113817049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 113818415 . T . PASS END=113818415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 113818429 . A . PASS END=113818514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:43:0,94,1507:0,94,255:40,0 chr2 113818519 . G . PASS END=113818520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,105,1575:0,117,255:35,0 chr2 113819701 . G . PASS END=113819701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 113819702 . T . PASS END=113819702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 113819703 . G . PASS END=113819708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr2 113819709 . A . PASS END=113819709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,886:0,32,255:26,0 chr2 113819710 . T . PASS END=113819724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1150:0,87,255:32,0 chr2 113819725 . A . PASS END=113819725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:30,0 chr2 113819726 . T . PASS END=113819729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1121:0,96,255:32,0 chr2 113819730 . T . PASS END=113819730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1109:0,65,255:31,0 chr2 113819731 . G . PASS END=113819741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:35,0 chr2 113819742 . A . PASS END=113819742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:34,0 chr2 113819743 . G . PASS END=113819769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1302:0,89,255:38,0 chr2 113819770 . A . PASS END=113819770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1045:0,39,255:29,0 chr2 113819771 . G . PASS END=113819786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1263:0,86,255:31,0 chr2 113819787 . C . PASS END=113819787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1007:0,60,255:26,0 chr2 113819788 . T . PASS END=113819788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113819789 . G . PASS END=113819790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 113819791 . C . PASS END=113819791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113819792 . A . PASS END=113819792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:26,0 chr2 113819793 . T . PASS END=113819794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113819795 . T . PASS END=113819805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:25,0 chr2 113819806 . A . PASS END=113819819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,46,255:19,0 chr2 113819820 . A . PASS END=113819828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,43,255:13,0 chr2 113820025 . G . PASS END=113820025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 113820030 . C . PASS END=113820030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 113820031 . C . PASS END=113820031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr2 113820032 . A . PASS END=113820032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 113820033 . G . PASS END=113820038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113820039 . A . PASS END=113820039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,848:0,42,255:24,0 chr2 113820040 . T . PASS END=113820227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1186:0,80,255:40,0 chr2 113820228 . G . PASS END=113820229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 113820230 . C . PASS END=113820230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 113820231 . T . PASS END=113820243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 113820244 . A . PASS END=113820246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 113820247 . G . PASS END=113820253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113820254 . G . PASS END=113820254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113820260 . C . PASS END=113820260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 113820360 . G . PASS END=113820360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 113820439 . C . PASS END=113820439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 113820552 . G . PASS END=113820552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 113820655 . A T, 96.75 PASS DP=20;MQ=250.00;MQRankSum=1.561;ReadPosRankSum=1.041;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,19,0:0.950,0.000:20:1,8,0:0,11,0:47:135,50,0,235,235,235:255,43,0:1,0:9.6755e+01,4.6755e+01,9.1637e-05,2.3152e+02,2.6629e+02,2.3453e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,1,6,13:0,1,9,10 chr2 113820680 . G . PASS END=113820680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 113820835 . C . PASS END=113820835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113820848 . T . PASS END=113820848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113820974 . G . PASS END=113820974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr2 113821111 . A . PASS END=113821111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:20,0 chr2 113821120 . G . PASS END=113821120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 113821137 . T . PASS END=113821137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 113821305 . T . PASS END=113821305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr2 113821498 . A . PASS END=113821498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 113821512 . C . PASS END=113821512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1465:0,114,255:38,0 chr2 113821659 . G . PASS END=113821659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 113821794 . G . PASS END=113821794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 113821839 . A . PASS END=113821839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 113821895 . C . PASS END=113821895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 113821952 . G . PASS END=113821952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 113822098 . A . PASS END=113822098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 113822103 . T . PASS END=113822103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 113822120 . T . PASS END=113822120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 113822145 . G . PASS END=113822145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 113822196 . C . PASS END=113822196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 113822249 . T . PASS END=113822249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113830316 . A . PASS END=113830347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,109,1764:0,109,255:40,0 chr2 113831906 . A . PASS END=113831912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1127:0,93,255:31,0 chr2 113831913 . T . PASS END=113831913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:28,0 chr2 113831914 . A . PASS END=113831914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 113831915 . T . PASS END=113831915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 113831916 . G . PASS END=113831991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1185:0,80,255:40,0 chr2 113832300 . A . PASS END=113832305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:22,0 chr2 113832306 . T . PASS END=113832306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr2 113832307 . C . PASS END=113832311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,817:0,72,255:24,0 chr2 113832312 . T C, 119.22 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:69:157,72,0,257,257,257:255,72,0:0,0:1.1922e+02,6.9218e+01,5.1772e-07,2.5399e+02,2.8876e+02,2.5700e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,11:0,0,14,10 chr2 113832313 . A . PASS END=113832315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:26,0 chr2 113832316 . T . PASS END=113832332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 113832333 . C A, 140.29 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,14,0:0,17,0:90:178,93,0,1185,93,1192:255,93,0:0,0:1.4029e+02,9.0293e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,18:0,0,18,13 chr2 113832334 . C . PASS END=113832370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1046:0,89,255:35,0 chr2 113832371 . G . PASS END=113832409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1164:0,85,255:35,0 chr2 113832410 . C . PASS END=113832410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1049:0,59,255:29,0 chr2 113832411 . C . PASS END=113832427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:26,0 chr2 113832729 . G . PASS END=113832765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:19,0 chr2 113832766 . A . PASS END=113832777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr2 113832778 . T . PASS END=113832779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 113832780 . A . PASS END=113832780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 113832781 . C . PASS END=113832782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 113832783 . T . PASS END=113832783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 113832784 . T . PASS END=113832785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 113832786 . T . PASS END=113832797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 113832798 . T . PASS END=113832800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 113832801 . G . PASS END=113832811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:21,0 chr2 113832812 . C . PASS END=113832824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr2 113832825 . G . PASS END=113832833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 113832834 . C . PASS END=113832844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 113832845 . C . PASS END=113832846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 113832847 . T . PASS END=113832852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 113832853 . G . PASS END=113832880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:22,0 chr2 113832881 . G . PASS END=113832881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 113832882 . C . PASS END=113832890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 113832891 . G . PASS END=113832918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,576:0,48,255:19,0 chr2 113832919 . T . PASS END=113832919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr2 113832920 . T . PASS END=113832940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr2 113832941 . G . PASS END=113832941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 113874467 . T C, 178.96 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,17,0:0,27,0:129:217,132,0,317,317,317:255,132,0:0,0:1.7896e+02,1.2896e+02,0.0000e+00,3.1373e+02,3.4850e+02,3.1674e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,27:0,0,26,18 chr2 113875596 . A . PASS END=113875605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:44:0,102,1634:0,102,255:40,0 chr2 113877643 . C . PASS END=113877705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,152,255:40,0 chr2 113885202 . A . PASS END=113885216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:31,0 chr2 113885217 . G . PASS END=113885217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr2 113885218 . G . PASS END=113885220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 113885221 . T . PASS END=113885221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 113885222 . C . PASS END=113885317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:34:0,96,1410:0,101,255:40,0 chr2 113887144 . C . PASS END=113887144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 113887153 . A . PASS END=113887241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,167,255:40,0 chr2 113887249 . G . PASS END=113887249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 113888622 . A . PASS END=113888719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:35:0,80,1225:0,80,255:40,0 chr2 113888720 . A . PASS END=113888734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:29:0,66,990:0,87,255:26,0 chr2 113888746 . C . PASS END=113888746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113890233 . G . PASS END=113890236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr2 113890237 . T . PASS END=113890237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:22,0 chr2 113890238 . T . PASS END=113890242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 113890243 . T . PASS END=113890392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1111:0,90,255:38,0 chr2 113890393 . A . PASS END=113890393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 113890394 . T . PASS END=113890405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1116:0,87,255:29,0 chr2 113890406 . A . PASS END=113890417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:26:0,66,990:0,71,255:26,0 chr2 113890418 . C . PASS END=113890418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 113890419 . A . PASS END=113890421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 113890422 . A . PASS END=113890422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr2 113890423 . A . PASS END=113890439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,876:0,69,255:23,0 chr2 113890440 . G . PASS END=113890442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 113890443 . G . PASS END=113890448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:24,0 chr2 113890523 . C . PASS END=113890523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 113890567 . C . PASS END=113890567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 113890578 . C . PASS END=113890578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr2 113890613 . C . PASS END=113890613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 113890693 . G . PASS END=113890693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 113890738 . T . PASS END=113890738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 113890751 . C . PASS END=113890751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 113890798 . C . PASS END=113890798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr2 113890817 . T . PASS END=113890817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr2 113890830 . C . PASS END=113890830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 113890927 . AT A, 0.17 DRAGENIndelHardQUAL DP=20;MQ=250.00;MQRankSum=3.230;ReadPosRankSum=1.484;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:15,5,0:0.250,0.000:20:9,4,0:6,1,0:14:0,2,52,41,149,188:178,0,255:12,6:1.6605e-01,1.4258e+01,6.7258e+01,7.6172e+01,1.9608e+02,2.2622e+02:0.00,12.00,15.00,34.77,46.77,37.77:8,7,2,3:8,7,1,4 chr2 113891049 . C . PASS END=113891049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,170,255:40,0 chr2 113891053 . T . PASS END=113891053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 113891091 . G . PASS END=113891091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 113891129 . A . PASS END=113891129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1631:0,70,255:40,4 chr2 113891488 . G . PASS END=113891488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 113891497 . A . PASS END=113891497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 113891518 . T . PASS END=113891518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 113891593 . A . PASS END=113891593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:28,0 chr2 113940034 . A . PASS END=113940034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 113940035 . T . PASS END=113940042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 113940043 . G . PASS END=113940057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:19,0 chr2 113940058 . G . PASS END=113940067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,792:0,63,255:25,0 chr2 113940068 . A . PASS END=113940068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr2 113940069 . G . PASS END=113940085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr2 113940086 . A . PASS END=113940086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,837:0,34,255:25,0 chr2 113940087 . C . PASS END=113940100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr2 113940101 . A . PASS END=113940136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:70:25:0,70,836:0,70,255:26,0 chr2 113940137 . A . PASS END=113940137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 113940138 . A . PASS END=113940152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:25,0 chr2 113940153 . G . PASS END=113940153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:22,0 chr2 113940154 . G . PASS END=113940156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 113940157 . C . PASS END=113940164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 113940165 . G . PASS END=113940165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 113940166 . C . PASS END=113940172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,995:0,84,255:29,0 chr2 113940173 . A . PASS END=113940175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1086:0,74,255:26,0 chr2 113940176 . A . PASS END=113940183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 113940184 . T . PASS END=113940184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 113940185 . G . PASS END=113940192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 113940193 . G . PASS END=113940205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,70,255:24,0 chr2 113940206 . C . PASS END=113940213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 113940214 . C . PASS END=113940228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,756:0,66,255:22,0 chr2 113940229 . T . PASS END=113940229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 113940230 . G . PASS END=113940239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 113940240 . T . PASS END=113940240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 113940241 . G . PASS END=113940244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 113940245 . A . PASS END=113940266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:46:19:0,46,646:0,46,255:19,0 chr2 113940267 . G . PASS END=113940267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,698:0,29,255:18,0 chr2 113940268 . G . PASS END=113940270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 113940271 . C . PASS END=113940273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 113940274 . C . PASS END=113940275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 113940276 . G . PASS END=113940283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 113940284 . T . PASS END=113940284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 113940285 . G . PASS END=113940290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 113940291 . T . PASS END=113940291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 113940292 . T . PASS END=113940335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,930:0,62,255:26,0 chr2 113940336 . A . PASS END=113940336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 113940337 . C . PASS END=113940337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr2 113940338 . A . PASS END=113940340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 113940341 . A . PASS END=113940341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr2 113940342 . T . PASS END=113940358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 113940359 . C . PASS END=113940359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:19,0 chr2 113940360 . C . PASS END=113940373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 113940374 . C . PASS END=113940374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 113940375 . A . PASS END=113940379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 113940380 . T . PASS END=113940380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 113940381 . G . PASS END=113940392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 113940393 . T . PASS END=113940393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 113940394 . G . PASS END=113940413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,909:0,67,255:26,0 chr2 113940414 . G . PASS END=113940416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113940417 . C . PASS END=113940417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 113940418 . A . PASS END=113940418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113940419 . C . PASS END=113940419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 113940420 . A . PASS END=113940432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:29,0 chr2 113940433 . T . PASS END=113940452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:26,0 chr2 113940453 . A . PASS END=113940460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 113940461 . G . PASS END=113940461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr2 113940462 . C . PASS END=113940464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1045:0,84,255:28,0 chr2 113940465 . A . PASS END=113940465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr2 113940466 . A . PASS END=113940467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,981:0,84,255:29,0 chr2 113940468 . G . PASS END=113940468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 113940469 . C . PASS END=113940470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113940471 . G . PASS END=113940479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 113940480 . C . PASS END=113940481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 113940482 . C . PASS END=113940482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 113940483 . G . PASS END=113940485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 113940486 . C . PASS END=113940496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1008:0,71,255:26,0 chr2 113940497 . T . PASS END=113940497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr2 113940498 . G . PASS END=113940522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,963:0,75,255:26,0 chr2 113940523 . C . PASS END=113940523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,0 chr2 113940524 . A . PASS END=113940541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 113940542 . T . PASS END=113940542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 113940543 . G . PASS END=113940612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,848:0,69,255:24,0 chr2 113940613 . G . PASS END=113940615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 113940616 . C . PASS END=113940619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 113940620 . C . PASS END=113940639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,690:0,44,255:19,0 chr2 113940640 . T . PASS END=113940640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 113940641 . C . PASS END=113940677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:46:17:0,46,599:0,46,255:19,0 chr2 113940678 . C . PASS END=113940681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 113940682 . G . PASS END=113940682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr2 113940683 . A . PASS END=113940688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:24,0 chr2 113940689 . A . PASS END=113940689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr2 113940690 . G . PASS END=113940701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,868:0,61,255:24,0 chr2 113940702 . G . PASS END=113940702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:21,0 chr2 113940703 . G . PASS END=113940721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr2 113940722 . C . PASS END=113940729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 113940730 . T . PASS END=113940730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,901:0,32,255:26,0 chr2 113940731 . C . PASS END=113940732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr2 113940733 . T . PASS END=113940733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113940734 . C . PASS END=113940734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr2 113940735 . C . PASS END=113940759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1155:0,80,255:32,0 chr2 113940760 . A . PASS END=113940760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 113940761 . G . PASS END=113940822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1197:0,86,255:36,0 chr2 113940823 . G . PASS END=113940823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:28,0 chr2 113940824 . A . PASS END=113940827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1036:0,82,255:32,0 chr2 113940828 . C . PASS END=113940828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr2 113940829 . T . PASS END=113940834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1113:0,82,255:32,0 chr2 113940835 . T . PASS END=113940835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:31,0 chr2 113940836 . G . PASS END=113940846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:31,0 chr2 113940847 . G . PASS END=113940848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 113940849 . C . PASS END=113940849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 113940850 . T . PASS END=113940850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr2 113940851 . C . PASS END=113940851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 113940852 . C . PASS END=113940852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 113940853 . C . PASS END=113940853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 113940854 . A . PASS END=113940855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,989:0,54,255:27,0 chr2 113940856 . G . PASS END=113940856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 113940857 . C . PASS END=113940861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1088:0,79,255:26,0 chr2 113940862 . G . PASS END=113940862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 113940863 . T . PASS END=113940863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr2 113940864 . G . PASS END=113940871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr2 113940872 . G . PASS END=113940876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,70,255:24,0 chr2 113940877 . G . PASS END=113940877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:22,0 chr2 113940878 . A . PASS END=113940884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:21,0 chr2 113940885 . A . PASS END=113940885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,764:0,55,255:19,0 chr2 113940886 . G . PASS END=113940898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 113940899 . C . PASS END=113940899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 113940900 . T . PASS END=113940904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:26,0 chr2 113940905 . T . PASS END=113940905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 113940906 . C . PASS END=113940922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1003:0,71,255:26,0 chr2 113940923 . T . PASS END=113940923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:25,0 chr2 113940924 . G . PASS END=113940930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 113940931 . C . PASS END=113940934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113940935 . A . PASS END=113940935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 113940936 . A . PASS END=113940943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 113940944 . C . PASS END=113940945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113940946 . G . PASS END=113940961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1064:0,84,255:29,0 chr2 113940962 . C . PASS END=113940963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 113940964 . G . PASS END=113940964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:25,0 chr2 113940965 . C . PASS END=113940974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 113940975 . G . PASS END=113941028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,1039:0,80,255:32,0 chr2 113941029 . G . PASS END=113941029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 113941030 . G . PASS END=113941042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1202:0,93,255:32,0 chr2 113941043 . C . PASS END=113941070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,68,255:26,0 chr2 113941071 . T . PASS END=113941073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,855:0,56,255:19,0 chr2 113941074 . T . PASS END=113941076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 113941077 . C . PASS END=113941085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr2 113941086 . T . PASS END=113941086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 113941087 . G . PASS END=113941089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 113942534 . G . PASS END=113942536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,941:0,65,255:27,0 chr2 113942537 . G . PASS END=113942539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113942540 . A . PASS END=113942540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 113942541 . G . PASS END=113942541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 113942542 . G . PASS END=113942542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 113942543 . C . PASS END=113942544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 113942545 . T . PASS END=113942550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 113942551 . T . PASS END=113942552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 113942553 . C . PASS END=113942553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 113942554 . T . PASS END=113942571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1064:0,87,255:38,0 chr2 113942572 . T . PASS END=113942572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1296:0,62,255:36,0 chr2 113942573 . G . PASS END=113942632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:39:0,93,1395:0,101,255:40,0 chr2 113942633 . C . PASS END=113942633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:30,0 chr2 113942634 . A . PASS END=113942639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1211:0,88,255:30,0 chr2 113942640 . T . PASS END=113942650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:23,0 chr2 113942942 . G . PASS END=113942951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:23,0 chr2 113942952 . G . PASS END=113942961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 113942962 . C . PASS END=113942962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:26,0 chr2 113942963 . T . PASS END=113942965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 113942966 . C . PASS END=113942966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 113942967 . A . PASS END=113942975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,948:0,84,255:29,0 chr2 113942976 . G . PASS END=113942976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr2 113942977 . T . PASS END=113942980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 113942981 . T . PASS END=113942984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 113942985 . G . PASS END=113942991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 113942992 . G . PASS END=113942992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 113942993 . G . PASS END=113942997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 113942998 . T . PASS END=113942998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 113942999 . C . PASS END=113943000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 113943001 . T . PASS END=113943014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr2 113943015 . G . PASS END=113943017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr2 113943239 . C . PASS END=113943258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,908:0,62,255:24,0 chr2 113943454 . A . PASS END=113943497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,488:0,42,255:17,0 chr2 113943498 . T . PASS END=113943498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 113943499 . T . PASS END=113943499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 113943500 . G . PASS END=113943500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 113943501 . G . PASS END=113943508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr2 113943509 . C . PASS END=113943527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:24,0 chr2 113943528 . T . PASS END=113943528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr2 113943529 . C . PASS END=113943585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:26,0 chr2 113943586 . G . PASS END=113943605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1169:0,80,255:31,0 chr2 113943606 . G . PASS END=113943606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 113943607 . G . PASS END=113943634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1117:0,85,255:34,0 chr2 113943635 . A . PASS END=113943635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1060:0,63,255:29,0 chr2 113943636 . G . PASS END=113943674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1119:0,80,255:32,0 chr2 113943675 . T . PASS END=113943675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr2 113943676 . C . PASS END=113943678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 113943679 . T . PASS END=113943679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:27,0 chr2 113943680 . C . PASS END=113943680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 113943681 . T . PASS END=113943681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1137:0,69,255:26,0 chr2 113943682 . T . PASS END=113943697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 113943698 . A . PASS END=113943698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 113943699 . C . PASS END=113943704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 113943705 . A . PASS END=113943705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,922:0,76,255:28,0 chr2 113943706 . G . PASS END=113943717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:30,0 chr2 113943718 . A . PASS END=113943718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 113943719 . A . PASS END=113943720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 113943721 . A . PASS END=113943771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,892:0,62,255:26,0 chr2 113943772 . C . PASS END=113943772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr2 113943773 . A . PASS END=113943788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr2 113943789 . A . PASS END=113943832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,712:0,44,255:19,0 chr2 113949957 . T . PASS END=113949965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,941:0,78,255:26,0 chr2 113949966 . G . PASS END=113949989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:29,0 chr2 113949990 . G . PASS END=113949990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 113949991 . C . PASS END=113950129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1155:0,80,255:40,0 chr2 113950130 . T . PASS END=113950130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 113950131 . C . PASS END=113950132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 113950133 . G . PASS END=113950148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:23,0 chr2 113950149 . T . PASS END=113950149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 113950150 . G . PASS END=113950156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 113950157 . T . PASS END=113950157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 113950158 . G . PASS END=113950158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 113950159 . C . PASS END=113950166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:18,0 chr2 113950625 . C . PASS END=113950705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:34:0,86,1197:0,86,255:40,0 chr2 113950835 . G . PASS END=113950921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:32:0,83,1148:0,83,255:40,0 chr2 113950922 . C . PASS END=113950922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 113950923 . A . PASS END=113950925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 113950926 . C . PASS END=113950931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,80,255:24,0 chr2 113950932 . A . PASS END=113950932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:23,0 chr2 113950933 . T . PASS END=113950934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,942:0,70,255:23,0 chr2 113950935 . T . PASS END=113950935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:22,0 chr2 113950936 . T . PASS END=113950940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 113950941 . T . PASS END=113950941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 113950942 . C . PASS END=113950942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 113950943 . A . PASS END=113950947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:24:0,44,765:0,44,255:21,0 chr2 113951169 . A . PASS END=113951227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:37:0,80,1411:0,80,255:40,0 chr2 113951436 . A . PASS END=113951525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,113,1488:0,113,255:40,0 chr2 113953304 . G . PASS END=113953313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 113953314 . G . PASS END=113953334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr2 113953335 . T . PASS END=113953335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 113953336 . C . PASS END=113953342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 113953343 . G . PASS END=113953344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr2 113953345 . C . PASS END=113953345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:21,0 chr2 113953346 . G . PASS END=113953347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:22,0 chr2 113953724 . G . PASS END=113953743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:13,0 chr2 113953744 . G . PASS END=113953781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,582:0,45,255:18,0 chr2 113953782 . A . PASS END=113953782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 113953783 . T . PASS END=113953807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,570:0,51,255:18,0 chr2 113953808 . T . PASS END=113953811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 113953812 . G . PASS END=113953854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,630:0,41,255:18,0 chr2 113953855 . A . PASS END=113953859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,557:0,32,255:13,0 chr2 113953860 . C . PASS END=113953867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 113953868 . T . PASS END=113953875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113953876 . G . PASS END=113953877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 113953878 . A . PASS END=113953880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113953881 . A . PASS END=113953881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:12,0 chr2 113953882 . A . PASS END=113953882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 113953883 . G . PASS END=113953884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113955141 . C . PASS END=113955161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,99,1380:0,102,255:36,0 chr2 113955162 . G . PASS END=113955162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 113955163 . G . PASS END=113955211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1228:0,84,255:39,0 chr2 113955324 . C . PASS END=113955333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 113955334 . A . PASS END=113955334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 113955335 . C . PASS END=113955339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 113955340 . G . PASS END=113955340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 113955341 . T . PASS END=113955369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 113955370 . T . PASS END=113955371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 113955372 . G . PASS END=113955445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:24,0 chr2 113955446 . C . PASS END=113955450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,853:0,41,255:19,0 chr2 113955451 . T . PASS END=113955451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:18,0 chr2 113955452 . G . PASS END=113955463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,50,255:19,0 chr2 113955464 . C . PASS END=113955464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:15,0 chr2 113955465 . T . PASS END=113955470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 113955471 . C . PASS END=113955471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 113955472 . T . PASS END=113955476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 113955477 . C . PASS END=113955478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 113955479 . C . PASS END=113955482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 113955483 . C . PASS END=113955484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 113955485 . G . PASS END=113955485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 113955486 . G . PASS END=113955490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 113956317 . C . PASS END=113956333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,399:0,36,255:13,0 chr2 113956334 . G . PASS END=113956343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 113956344 . C . PASS END=113956361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 113956362 . T . PASS END=113956368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113956369 . A . PASS END=113956370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 113956371 . G C, 98.17 PASS DP=17;MQ=247.20;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,8,0:0,9,0:48:136,51,0,659,51,659:255,51,0:0,0:9.8165e+01,4.8165e+01,6.6269e-05,4.5000e+02,8.2935e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,7:0,0,7,10 chr2 113956372 . C . PASS END=113956386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 113956387 . T . LowGQ END=113956387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,593:3,0,255:15,0 chr2 113956388 . T . PASS END=113956396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:20,0 chr2 113956397 . C . PASS END=113956408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,900:0,66,255:24,0 chr2 113956409 . A . PASS END=113956417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 113956418 . T . PASS END=113956418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:22,0 chr2 113956419 . C . PASS END=113956423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 113956424 . G . PASS END=113956424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 113956425 . G . PASS END=113956429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 113956430 . T . PASS END=113956430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 113956431 . C . PASS END=113956443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr2 113956444 . C . PASS END=113956461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 113956660 . G . PASS END=113956662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 113956663 . G . PASS END=113956678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 113956679 . A . PASS END=113956679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr2 113956680 . C . PASS END=113956683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 113956684 . A . PASS END=113956684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,427:0,28,255:14,0 chr2 113956685 . A . PASS END=113956691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,484:0,45,255:16,0 chr2 113956692 . G . PASS END=113956692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 113956693 . G . PASS END=113956693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 113956694 . A . PASS END=113956694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr2 113956695 . C . PASS END=113956717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:19,0 chr2 113956718 . A . PASS END=113956720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 113956721 . T . PASS END=113956759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:15:0,44,529:0,44,255:19,0 chr2 113956760 . A . PASS END=113956760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 113956761 . G . PASS END=113956772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr2 113956773 . C . PASS END=113956783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113956784 . A . PASS END=113956789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 113956790 . A . PASS END=113956790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 113956791 . C . PASS END=113956796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 113956797 . G . PASS END=113956800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 113956801 . G . PASS END=113956801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 113956802 . A . PASS END=113956803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 113958735 . A . PASS END=113958739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,450:0,39,255:13,0 chr2 113958740 . C . PASS END=113958740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 113958741 . C . PASS END=113958746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr2 113958747 . G . PASS END=113958747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 113958748 . A . PASS END=113958750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:14:0,31,488:0,31,255:14,0 chr2 113958751 . C . PASS END=113958751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 113958752 . C . PASS END=113958752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 113958753 . T . PASS END=113958764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr2 113958765 . C . PASS END=113958767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 113958768 . G . PASS END=113958797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,676:0,54,255:19,0 chr2 113958798 . C . PASS END=113958804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 113958805 . T . PASS END=113958805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr2 113958806 . G . PASS END=113958812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,853:0,66,255:26,0 chr2 113958813 . G . PASS END=113958825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:29,0 chr2 113958826 . G . PASS END=113958826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 113958827 . G . PASS END=113958867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:30,0 chr2 113958868 . A . PASS END=113958901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,969:0,65,255:26,0 chr2 113958902 . G . PASS END=113958918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 113958919 . A . PASS END=113958919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,890:0,51,255:24,0 chr2 113958920 . G . PASS END=113958922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 113958923 . G . PASS END=113958923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113958924 . A . PASS END=113958924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 113958925 . A . PASS END=113958925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 113958926 . G . PASS END=113958960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,886:0,61,255:26,0 chr2 113958961 . T . PASS END=113958961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr2 113958962 . C . PASS END=113958975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:21,0 chr2 113958976 . A . PASS END=113958976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 113958977 . C . PASS END=113958983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 113958984 . C . PASS END=113958992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 113973583 . T . PASS END=113973583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 113973593 . G . PASS END=113973593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 113973605 . T . PASS END=113973605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 113973635 . G . PASS END=113973635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 113973701 . G . PASS END=113973701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 113973742 . G . PASS END=113973742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 113973784 . T . PASS END=113973784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 113973790 . C . PASS END=113973790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 113973798 . C . PASS END=113973798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 113973834 . C . PASS END=113973834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 113973879 . G . PASS END=113973879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 113973917 . C . PASS END=113973918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 113974066 . C . PASS END=113974066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 113974077 . G . PASS END=113974077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 113974133 . A . PASS END=113974133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 113974168 . G . PASS END=113974168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 113974303 . G . PASS END=113974303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 113974345 . C . PASS END=113974345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1371:0,95,255:33,0 chr2 113974620 . C . PASS END=113974620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 113974653 . C . PASS END=113974653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 113974717 . T . PASS END=113974717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 113974924 . C . PASS END=113974924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 113975044 . C . PASS END=113975044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 113975050 . G . PASS END=113975050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 113975081 . C . PASS END=113975081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113975172 . G . PASS END=113975172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113975213 . G . PASS END=113975213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 113975265 . C . PASS END=113975266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 113975321 . C . PASS END=113975321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr2 113975344 . G . PASS END=113975344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 113975346 . G . PASS END=113975346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 113975402 . G . PASS END=113975402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 113975407 . C . PASS END=113975407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 113975413 . G . PASS END=113975413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 113975446 . A . PASS END=113975446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 113975498 . C . PASS END=113975498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 113975583 . C . PASS END=113975583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 113975609 . G . PASS END=113975609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 113975638 . G . PASS END=113975638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 113975687 . G . PASS END=113975687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 113975738 . G . PASS END=113975738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 113975742 . C . PASS END=113975742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 113975767 . C . PASS END=113975767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1380:0,108,255:36,0 chr2 113975820 . C . PASS END=113975820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 113975906 . G . PASS END=113975906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 113976110 . C . PASS END=113976119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,872:0,72,255:25,0 chr2 113976120 . T . PASS END=113976120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 113976121 . C . PASS END=113976177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,840:0,66,255:26,0 chr2 113976178 . A . PASS END=113976178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 113976179 . T . PASS END=113976186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 113977669 . T . PASS END=113977671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:22,0 chr2 113977672 . G . PASS END=113977672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 113977673 . C . PASS END=113977673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:21,0 chr2 113977674 . A . PASS END=113977675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 113977676 . G . PASS END=113977676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 113977677 . C . PASS END=113977680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 113977681 . A . PASS END=113977682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 113977683 . T . PASS END=113977683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 113977684 . T . PASS END=113977684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 113977685 . G . PASS END=113977686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 113977687 . G . PASS END=113977687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 113977688 . G . PASS END=113977745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,946:0,72,255:26,0 chr2 113977746 . T . PASS END=113977746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 113977747 . A . PASS END=113977750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 113977751 . A . PASS END=113977751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 113977752 . C . PASS END=113977755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 113984633 . C . PASS END=113984636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 113984637 . G . PASS END=113984648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr2 113984649 . G . PASS END=113984652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 113984653 . G . PASS END=113984653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 113984654 . C . PASS END=113984758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,926:0,81,255:36,0 chr2 113984759 . A . PASS END=113984780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,71,255:26,0 chr2 113984781 . G . PASS END=113984782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 113984783 . T . PASS END=113984785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 113984786 . G . PASS END=113984786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 113984787 . G . PASS END=113984788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 113984789 . T . PASS END=113984806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr2 113984807 . G . PASS END=113984814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:10,0 chr2 113984815 . G . PASS END=113984816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 113984817 . C . PASS END=113984833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr2 113992967 . G . PASS END=113992967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 113992971 . C . PASS END=113992998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:19,0 chr2 113992999 . C . PASS END=113993004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:25,0 chr2 113993005 . C . PASS END=113993005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 113993006 . A . PASS END=113993014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr2 113993015 . G . PASS END=113993026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,988:0,84,255:30,0 chr2 113993027 . G . PASS END=113993027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:30,0 chr2 113993028 . C . PASS END=113993097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:31:0,85,1158:0,85,255:36,0 chr2 113993098 . G . PASS END=113993098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1059:0,63,255:31,0 chr2 113993099 . G . PASS END=113993101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1066:0,82,255:32,0 chr2 113993102 . G . PASS END=113993102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1088:0,69,255:31,0 chr2 113993103 . A . PASS END=113993106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1183:0,89,255:33,0 chr2 113993107 . A . PASS END=113993107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:30,0 chr2 113993108 . G . PASS END=113993108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 113993109 . A . PASS END=113993109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1070:0,55,255:28,0 chr2 113993110 . A . PASS END=113993111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:30,0 chr2 113993112 . T . PASS END=113993112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:30,0 chr2 113993113 . G . PASS END=113993126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1127:0,82,255:32,0 chr2 113993127 . T . PASS END=113993127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 113993128 . T . PASS END=113993133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 113993134 . C . PASS END=113993134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:25,0 chr2 113993135 . T . PASS END=113993141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,991:0,71,255:26,0 chr2 113993142 . C . PASS END=113993142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:24,0 chr2 113993143 . G . PASS END=113993150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,922:0,62,255:25,0 chr2 113993151 . A . PASS END=113993151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 113993152 . G . PASS END=113993154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 113993155 . A . PASS END=113993159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,53,255:18,0 chr2 113994166 . C . PASS END=113994167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 113994178 . C . PASS END=113994298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:40:0,103,1406:0,103,255:40,0 chr2 113999128 . C . PASS END=113999156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,847:0,69,255:26,0 chr2 113999157 . C . PASS END=113999157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:25,0 chr2 113999158 . A . PASS END=113999162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 113999163 . C . PASS END=113999163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 113999164 . C . PASS END=113999164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 113999165 . T . PASS END=113999171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr2 113999172 . A . PASS END=113999172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 113999173 . G . PASS END=113999218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1037:0,80,255:34,0 chr2 113999219 . C . PASS END=113999219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr2 113999220 . T . PASS END=113999253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1224:0,83,255:35,0 chr2 113999254 . G . PASS END=113999254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 113999255 . C . PASS END=113999257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:31,0 chr2 113999258 . C . PASS END=113999258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:28,0 chr2 113999259 . T . PASS END=113999262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 113999263 . G . PASS END=113999292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,68,255:26,0 chr2 113999293 . A . PASS END=113999293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 113999294 . T . PASS END=113999299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 113999300 . T . PASS END=113999303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 113999585 . T . PASS END=113999669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:86:37:0,86,1260:0,86,255:40,0 chr2 113999670 . C . PASS END=113999670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1510:0,63,255:40,0 chr2 113999671 . T . PASS END=113999687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:41:0,90,1396:0,90,255:40,1 chr2 113999688 . A . PASS END=113999688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:26:40:0,26,1211:0,26,255:32,0 chr2 113999689 . G . PASS END=113999695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1299:0,81,255:34,0 chr2 113999696 . C . PASS END=113999696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1291:0,65,255:26,0 chr2 113999697 . T . PASS END=113999697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 113999698 . G . PASS END=113999707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:29:0,66,990:0,70,255:25,0 chr2 113999713 . G . PASS END=113999713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 114000267 . T . PASS END=114000355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1266:0,84,255:40,0 chr2 114002004 . C . PASS END=114002007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:26:0,70,984:0,70,255:26,0 chr2 114002008 . T . PASS END=114002008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:26,0 chr2 114002009 . A . PASS END=114002204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:29:0,83,1260:0,83,255:40,0 chr2 114004325 . G . PASS END=114004325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 114004331 . C . PASS END=114004347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,623:0,40,255:19,0 chr2 114004348 . G . PASS END=114004349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 114004350 . C . PASS END=114004351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr2 114004352 . C . PASS END=114004370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,864:0,65,255:26,0 chr2 114004371 . G . PASS END=114004379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr2 114004380 . A . PASS END=114004380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr2 114004381 . G . PASS END=114004381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 114004382 . A . PASS END=114004382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:27,0 chr2 114004383 . T . PASS END=114004388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 114004389 . A . PASS END=114004389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 114004390 . G . PASS END=114004391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 114004392 . G . PASS END=114004392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr2 114004393 . C . PASS END=114004464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1133:0,83,255:34,0 chr2 114004465 . G . PASS END=114004475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 114004476 . G . PASS END=114004476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:24,0 chr2 114004477 . C . PASS END=114004491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,71,255:26,0 chr2 114004492 . A . PASS END=114004496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 114035947 . C . PASS END=114035949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:24,0 chr2 114035950 . A . PASS END=114035950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 114035951 . T . PASS END=114035956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 114035957 . G . PASS END=114035957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 114035958 . G . PASS END=114035967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:25,0 chr2 114035968 . G . PASS END=114035968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:25,0 chr2 114035969 . C . PASS END=114036027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 114036028 . G . PASS END=114036046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,47,255:18,0 chr2 114036050 . C . PASS END=114036050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:15,0 chr2 114036408 . C . PASS END=114036419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 114036420 . C . PASS END=114036421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:29,0 chr2 114036422 . G . PASS END=114036435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1185:0,80,255:35,0 chr2 114036436 . G C, 159.98 PASS DP=38;MQ=248.63;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,25,0:0,13,0:110:198,113,0,1376,113,1376:255,117,0:0,0:1.5998e+02,1.0998e+02,0.0000e+00,4.5000e+02,1.4475e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,15:0,0,18,20 chr2 114036437 . T . PASS END=114036473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,101,1304:0,101,255:39,0 chr2 114036474 . T . PASS END=114036493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1213:0,94,255:37,0 chr2 114036494 . T . PASS END=114036494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:33,0 chr2 114036495 . T . PASS END=114036500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1310:0,92,255:35,0 chr2 114164152 . G . PASS END=114164158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 114164159 . A . PASS END=114164168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr2 114164169 . C . PASS END=114164204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:19,0 chr2 114164205 . G . PASS END=114164207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 114164208 . G . PASS END=114164218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 114164219 . C . PASS END=114164268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr2 114164269 . A . PASS END=114164269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr2 114164270 . T . PASS END=114164277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:24,0 chr2 114164278 . A . PASS END=114164281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 114164282 . A . PASS END=114164282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 114164283 . G . PASS END=114164286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 114195446 . A . PASS END=114195463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:25,0 chr2 114195464 . T . PASS END=114195464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 114195465 . C . PASS END=114195474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr2 114195475 . G . PASS END=114195483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:33,0 chr2 114195484 . T . PASS END=114195484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1011:0,66,255:31,0 chr2 114195485 . C . PASS END=114195599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:33:0,84,1260:0,99,255:40,0 chr2 114196649 . A . PASS END=114196674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:36,0 chr2 114196675 . C . PASS END=114196675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 114196676 . T . PASS END=114196678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 114196679 . C . PASS END=114196693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr2 114196694 . G . PASS END=114196694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 114198928 . G . PASS END=114199014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,117,1755:0,128,255:40,0 chr2 114201344 . G . PASS END=114201409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,99,1443:0,102,255:40,0 chr2 114201410 . T . PASS END=114201410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr2 114201411 . T . PASS END=114201428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1241:0,89,255:34,0 chr2 114201429 . C . PASS END=114201440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,70,255:26,0 chr2 114202541 . G . PASS END=114202632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:126,0:126:99:92:0,120,1800:0,255,255:40,0 chr2 114210716 . G . PASS END=114210761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:63:0,120,1800:0,179,255:40,0 chr2 114210762 . T . PASS END=114210762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,9:90:69:90:0,69,2490:0,69,255:40,0 chr2 114210763 . A . PASS END=114210772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:86:0,117,1755:0,183,255:40,0 chr2 114210773 . A . PASS END=114210775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:99:87:0,120,1800:0,230,255:40,0 chr2 114212318 . G . PASS END=114212355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:80:0,120,1800:0,227,255:40,0 chr2 114213133 . G . PASS END=114213147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:93:0,120,1800:0,249,255:40,0 chr2 114214642 . G . PASS END=114214662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:96:0,120,1800:0,255,255:40,0 chr2 114214763 . A . PASS END=114214786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,173,255:40,0 chr2 114218250 . C . PASS END=114218296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,186,255:40,0 chr2 114219985 . G . PASS END=114220017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,113,1784:0,113,255:40,0 chr2 114220018 . T . PASS END=114220054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,129,255:40,0 chr2 114220055 . T C, 213.23 PASS DP=57;MQ=75.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,25,0:0,32,0:168:251,171,0,2135,171,2135:255,171,0:0,0:2.1323e+02,1.6763e+02,0.0000e+00,4.5000e+02,2.0240e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,32:0,0,31,26 chr2 114220056 . T . PASS END=114220071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,125,255:40,0 chr2 114222706 . A . PASS END=114222750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,569:0,40,255:19,0 chr2 114224060 . A . PASS END=114224078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:53:0,90,1350:0,159,255:40,0 chr2 114228610 . A . PASS END=114228666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,111,1665:0,141,255:40,0 chr2 114239754 . T . PASS END=114239754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,595:0,46,255:20,0 chr2 114239755 . T . PASS END=114239770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:23,0 chr2 114239771 . A . PASS END=114239771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 114239772 . G . PASS END=114239795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,906:0,72,255:24,0 chr2 114239796 . C . PASS END=114239796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 114239797 . C . PASS END=114239797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:21,0 chr2 114239798 . T . PASS END=114239802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 114239803 . C . PASS END=114239805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 114251334 . A . LowDepth;LowGQ END=114251402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr2 114251506 . A . PASS END=114251510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 114251511 . C . PASS END=114251516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 114251517 . G . PASS END=114251517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 114251518 . G . PASS END=114251522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:19,0 chr2 114251523 . G . PASS END=114251523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 114251524 . A . PASS END=114251524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 114251525 . A . PASS END=114251530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 114251531 . G . PASS END=114251531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 114251532 . A . PASS END=114251538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 114251539 . G . PASS END=114251551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,913:0,81,255:27,0 chr2 114251552 . T . PASS END=114251552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 114251553 . G . PASS END=114251553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 114251554 . G . PASS END=114251554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 114251555 . A . PASS END=114251557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 114251558 . T . PASS END=114251558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 114251559 . C . PASS END=114251559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 114251560 . A . PASS END=114251560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 114251561 . T . PASS END=114251561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 114251562 . A . PASS END=114251562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 114251563 . A . PASS END=114251571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr2 114251572 . G . PASS END=114251572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 114251573 . T . PASS END=114251573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:27,0 chr2 114251574 . A . PASS END=114251577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:29,0 chr2 114251578 . T . PASS END=114251578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:20:29:0,20,701:0,20,255:25,0 chr2 114251579 . T . PASS END=114251597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr2 114251598 . G . PASS END=114251598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr2 114251599 . A . PASS END=114251600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 114251601 . A . PASS END=114251601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,991:0,48,255:27,0 chr2 114251602 . A . PASS END=114251604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 114251605 . T . PASS END=114251605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,978:0,56,255:27,0 chr2 114251606 . C . PASS END=114251620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr2 114251621 . T . PASS END=114251621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:27,0 chr2 114251622 . A . PASS END=114251625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr2 114252697 . G . LowDepth;LowGQ END=114252826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 114253214 . G . LowDepth;LowGQ END=114253320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 114256834 . A . PASS END=114256834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr2 114256835 . T . PASS END=114256839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:22,0 chr2 114256840 . C T, 101.76 PASS DP=22;MQ=22.25;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,22,0:1.000,0.000:22:0,9,0:0,13,0:63:140,66,0,824,66,824:255,66,0:0,0:1.0176e+02,6.2755e+01,2.3297e-06,4.5000e+02,9.7525e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,11:0,0,12,10:114256840 chr2 114256841 . T . PASS END=114256845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,817:0,66,255:23,0 chr2 114256846 . A . PASS END=114256846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr2 114256847 . G . PASS END=114256858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,809:0,69,255:23,0 chr2 114256859 . C T, 105.22 PASS DP=23;MQ=21.96;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,23,0:1.000,0.000:23:0,9,0:0,14,0:66:143,69,0,884,69,884:255,69,0:0,0:1.0522e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,9:0,0,14,9:114256840 chr2 114256860 . T . PASS END=114256864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 114256865 . C . PASS END=114256867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 114256868 . C . PASS END=114256873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 114256874 . A . PASS END=114256874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 114256875 . G . PASS END=114256880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 114256881 . C . PASS END=114256896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,643:0,40,255:19,0 chr2 114256897 . G . PASS END=114256916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,562:0,40,255:18,0 chr2 114256917 . T . PASS END=114256930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:13:0,39,474:0,39,255:13,0 chr2 114256931 . A . PASS END=114256931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 114256932 . G . PASS END=114256936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 114256937 . A . PASS END=114256938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr2 114256939 . G . PASS END=114256940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 114256941 . A . PASS END=114256941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:11,0 chr2 114256942 . G . PASS END=114256942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 114256943 . A . PASS END=114256943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr2 114256944 . C . PASS END=114256945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 114256946 . A . PASS END=114256946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr2 114256947 . G . PASS END=114256947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 114256948 . G . PASS END=114256948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 114256949 . T . PASS END=114256960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 114256961 . A . PASS END=114256961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 114256962 . G . PASS END=114256963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 114256964 . A . PASS END=114256977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 114256978 . A C, 52.10 PASS DP=10;MQ=14.05;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,4,0:0,6,0:27:90,30,0,382,30,382:255,30,0:0,0:5.2105e+01,2.7105e+01,8.4971e-03,3.7869e+02,6.1875e+01,3.8169e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,6:0,0,6,4 chr2 114256979 . A . PASS END=114257011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 114257012 . A . PASS END=114257038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr2 114257039 . T . LowGQ END=114257057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:5,0:5:0:3:0,0,0:0,9,116:3,0 chr2 114257058 . G GGGC, 23.92 PASS DP=3;MQ=12.57;FractionInformativeReads=0.667 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,2,0:0,0,0:7:56,9,0,156,156,156:69,0,30:0,2:2.3923e+01,6.9223e+00,1.0083e+00,1.5869e+02,1.8869e+02,1.6170e+02:0.00,30.00,33.01,34.77,64.77,37.78:0,0,0,2:0,0,0,2 chr2 114257059 . G . LowGQ END=114257063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,0:4:0:3:0,0,0:0,0,8:3,0 chr2 114257064 . C . PASS END=114257067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,178:5,0 chr2 114257068 . C . LowGQ END=114257068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,100:37,0,137:4,0 chr2 114257069 . C . PASS END=114257082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 114257083 . G . PASS END=114257096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr2 114257097 . G . PASS END=114257107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:13,0 chr2 114257108 . C . PASS END=114257108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 114257109 . G . PASS END=114257125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,551:0,45,255:17,0 chr2 114257126 . C . PASS END=114257150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,809:0,66,255:24,0 chr2 114257151 . A . PASS END=114257151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 114257152 . A . PASS END=114257156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,876:0,72,255:26,0 chr2 114257157 . C . PASS END=114257161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr2 114257162 . A . PASS END=114257162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr2 114257163 . C . PASS END=114257228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:32:0,96,1201:0,96,255:40,0 chr2 114257229 . C . PASS END=114257254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1305:0,108,255:39,0 chr2 114257255 . T . PASS END=114257256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 114257257 . C . PASS END=114257265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:29,0 chr2 114257266 . C T, 8.55 DRAGENSnpHardQUAL DP=28;MQ=24.89;MQRankSum=0.588;ReadPosRankSum=3.667;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,6,0:0.214,0.000:28:10,3,0:12,3,0:9:43,0,33,215,763,977:145,0,255:19,0:8.5549e+00,6.5348e-01,3.6653e+01,2.1523e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,11,4,2:11,11,1,5 chr2 114257267 . G . PASS END=114257269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 114257270 . G . PASS END=114257270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:23,0 chr2 114257271 . C . PASS END=114257295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,71,255:26,0 chr2 114257296 . A . LowGQ END=114257296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,790:2,0,255:19,0 chr2 114257297 . T . PASS END=114257298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr2 114257299 . C . PASS END=114257314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 114257315 . T . PASS END=114257315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:14,0 chr2 114257316 . G . PASS END=114257320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr2 114257321 . A . PASS END=114257321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 114257322 . C . PASS END=114257324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 114257325 . C . PASS END=114257331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:14:0,21,315:0,42,255:9,0 chr2 114257332 . A . PASS END=114257335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:12:12:0,12,180:0,36,255:6,0 chr2 114257336 . T . PASS END=114257344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:9:6:0,9,135:0,18,233:3,0 chr2 114257345 . A . PASS END=114257348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:5,0 chr2 114257349 . G . LowGQ END=114257353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:0,0,118:3,0 chr2 114257354 . A G, 37.31 PASS DP=5;MQ=18.12;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,3,0:0,2,0:12:75,15,0,194,15,194:194,15,0:0,0:3.7312e+01,1.2312e+01,2.6375e-01,1.9099e+02,4.7082e+01,1.9399e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,5:0,0,2,3 chr2 114257355 . C . LowGQ END=114257368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:3:0,0,45:0,0,61:3,0 chr2 114257369 . C A, 15.13 PASS DP=3;MQ=7.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:6:52,9,0,108,9,108:108,9,0:0,0:1.5130e+01,7.1298e+00,1.1037e+00,1.0617e+02,4.1900e+01,1.0917e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,3:0,0,2,1 chr2 114257370 . C . LowGQ END=114257372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,116:0,0,116:4,0 chr2 114257373 . C . PASS END=114257415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 114257416 . A . LowGQ END=114257416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,123:2,0,124:4,0 chr2 114257417 . G . PASS END=114257420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr2 114257421 . T . LowGQ END=114257421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,123:2,0,124:4,0 chr2 114257422 . C . PASS END=114257442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 114257443 . A C, 34.31 PASS DP=5;MQ=13.09;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,1,0:0,4,0:12:72,15,0,194,15,194:194,15,0:0,0:3.4313e+01,1.2313e+01,2.6455e-01,1.9110e+02,4.7083e+01,1.9410e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,5:0,0,4,1 chr2 114257444 . A . PASS END=114257480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr2 114257481 . C . PASS END=114257498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 114257499 . T . PASS END=114257505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 114257506 . G . PASS END=114257533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,78:0,6,78:3,0 chr2 114257534 . C G, 2.18 DRAGENSnpHardQUAL DP=2;MQ=12.59;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:1,1,0:0.500,0.000:2:0,0,0:1,1,0:4:33,0,11,36,36,71:33,0,33:1,0:2.1830e+00,4.2042e+00,1.8195e+01,3.9963e+01,7.4710e+01,7.8698e+01:0.00,34.77,37.77,34.77,69.54,37.77:1,0,0,1:0,1,1,0 chr2 114257535 . T . PASS END=114257554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:3,0 chr2 114257555 . T C, 21.03 PASS DP=3;MQ=13.08;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:7:58,9,0,116,9,116:116,9,0:0,0:2.1031e+01,7.0312e+00,1.0021e+00,1.1436e+02,4.1801e+01,1.1736e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,2:0,0,1,2 chr2 114257556 . G . PASS END=114257579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,111:0,12,111:6,0 chr2 114257580 . C . PASS END=114257589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr2 114257590 . G C, 0.86 DRAGENSnpHardQUAL DP=9;MQ=26.71;MQRankSum=1.666;ReadPosRankSum=-1.666;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:7,2,0:0.222,0.000:9:3,0,0:4,2,0:7:28,0,27,128,128,128:50,0,244:7,0:8.5515e-01,7.4820e+00,3.7815e+01,1.3563e+02,1.7040e+02,1.3864e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,4,0,2:3,4,2,0:114257590 chr2 114257591 . C . PASS END=114257594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 114257595 . C G, 0.86 DRAGENSnpHardQUAL DP=9;MQ=26.71;MQRankSum=1.203;ReadPosRankSum=-0.573;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:6,3,0:0.333,0.000:9:2,1,0:4,2,0:7:28,0,27,128,128,128:67,0,206:6,0:8.5585e-01,7.4788e+00,3.7812e+01,1.3563e+02,1.7040e+02,1.3864e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,3,0,3:3,3,2,1:114257590 chr2 114257596 . G . PASS END=114257626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 114257627 . A . PASS END=114257627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 114257628 . T . PASS END=114257635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr2 114257636 . G . PASS END=114257641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 114257642 . T . PASS END=114257642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 114257643 . A . PASS END=114257647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 114257648 . T . PASS END=114257648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 114257649 . C . PASS END=114257659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 114257660 . C . PASS END=114257661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 114257662 . T . PASS END=114257662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 114257663 . A . PASS END=114257667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 114257668 . G . PASS END=114257690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,202:6,0 chr2 114257691 . C . LowGQ END=114257708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:4,0:4:0:1:0,0,0:0,3,39:1,0 chr2 114257709 . C . LowDepth;LowGQ END=114258060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 114386184 . A . PASS END=114386192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 114386193 . G . PASS END=114386193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 114386194 . A . PASS END=114386217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 114386218 . A . PASS END=114386219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 114386220 . C . PASS END=114386220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 114386221 . A . PASS END=114386223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 114386224 . G . PASS END=114386227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 114386228 . G . PASS END=114386229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 114386230 . A . PASS END=114386230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 114386231 . T . PASS END=114386249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 114386250 . A . PASS END=114386250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 114386251 . A . PASS END=114386257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 114386258 . C . PASS END=114386276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 114386277 . G . PASS END=114386290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 114390492 . A . PASS END=114390588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:35:0,90,1350:0,98,255:40,0 chr2 114390589 . A . PASS END=114390609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:22:0,66,792:0,66,255:26,0 chr2 114390610 . G . PASS END=114390610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 114390611 . C . PASS END=114390613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 114390614 . C . PASS END=114390614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 114390615 . C . PASS END=114390621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 114390622 . C . PASS END=114390622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 114390623 . A . PASS END=114390628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 114390629 . G . PASS END=114390637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 114391496 . A . PASS END=114391535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:39:0,98,1274:0,98,255:40,0 chr2 114391536 . T . PASS END=114391537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:60:47:0,60,1273:0,60,255:40,0 chr2 114391538 . A . PASS END=114391541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,108,1530:0,108,255:40,0 chr2 114391542 . T . PASS END=114391542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1312:0,58,255:40,0 chr2 114391543 . T . PASS END=114391546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:48:0,89,1521:0,89,255:40,0 chr2 114391547 . T . PASS END=114391547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,6:48:22:48:0,22,1297:0,22,255:39,0 chr2 114391548 . G . PASS END=114391552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:46:0,120,1800:0,127,255:40,0 chr2 114391553 . T . PASS END=114391553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,5:46:18:46:0,18,1252:0,18,255:40,0 chr2 114391554 . T . PASS END=114391572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:85:38:0,85,1313:0,85,255:39,0 chr2 114391573 . G . PASS END=114391573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1189:0,67,255:34,0 chr2 114391574 . C . PASS END=114391582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1211:0,81,255:35,0 chr2 114391583 . T . PASS END=114391583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1013:0,44,255:30,0 chr2 114391584 . G . PASS END=114391602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1113:0,85,255:34,0 chr2 114391730 . T . PASS END=114391809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:32:0,87,1305:0,92,255:40,0 chr2 114392605 . G . PASS END=114392707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:56:0,120,1800:0,155,255:40,0 chr2 114394876 . G . PASS END=114394963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:50:0,104,1751:0,104,255:40,0 chr2 114398471 . G . PASS END=114398472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr2 114398473 . G . PASS END=114398473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 114398474 . T . PASS END=114398474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:27,0 chr2 114398475 . T . PASS END=114398511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:28:0,83,988:0,83,255:35,0 chr2 114398512 . C . PASS END=114398512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:31,0 chr2 114398513 . A . PASS END=114398516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1286:0,89,255:32,0 chr2 114398517 . G . PASS END=114398517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:30,0 chr2 114398518 . G . PASS END=114398526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:32,0 chr2 114398527 . G . PASS END=114398527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr2 114398528 . C . PASS END=114398538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1160:0,99,255:33,0 chr2 114398539 . C . PASS END=114398539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:28,0 chr2 114398540 . A . PASS END=114398548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1052:0,82,255:29,0 chr2 114398549 . A . PASS END=114398549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:27,0 chr2 114398550 . T . PASS END=114398558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:29,0 chr2 114398559 . T . PASS END=114398564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 114398565 . T . PASS END=114398567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 114398568 . C . PASS END=114398590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,886:0,64,255:26,0 chr2 114398591 . A . PASS END=114398591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:18,0 chr2 114398592 . T . PASS END=114398597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:22,0 chr2 114398598 . C . PASS END=114398605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:23:0,54,810:0,59,255:19,0 chr2 114398606 . T . PASS END=114398606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:19,0 chr2 114398607 . G . PASS END=114398611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 114398930 . C . PASS END=114398941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1005:0,83,255:35,0 chr2 114398942 . T . PASS END=114398942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1149:0,50,255:33,0 chr2 114398943 . G . PASS END=114398986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1053:0,85,255:35,0 chr2 114398987 . T . PASS END=114398987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1143:0,63,255:32,0 chr2 114398988 . G . PASS END=114398993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1125:0,82,255:33,0 chr2 114398994 . C . PASS END=114398994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1176:0,74,255:32,0 chr2 114398995 . G . PASS END=114399002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:33,0 chr2 114399003 . T . PASS END=114399003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:28,0 chr2 114399004 . G . PASS END=114399005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr2 114399006 . T . PASS END=114399006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1129:0,63,255:29,0 chr2 114399007 . G . PASS END=114399007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:28,0 chr2 114399008 . A . PASS END=114399008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:24:34:0,24,1049:0,24,255:27,0 chr2 114399009 . T . PASS END=114399023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1111:0,82,255:30,0 chr2 114399024 . G . PASS END=114399024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 114399025 . A . PASS END=114399025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 114399026 . A . PASS END=114399026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:27,0 chr2 114399027 . G . PASS END=114399034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 114399035 . T . PASS END=114399056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,976:0,65,255:26,0 chr2 114399057 . G . PASS END=114399057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 114399358 . C . PASS END=114399361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 114399362 . T . PASS END=114399362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 114399363 . C . PASS END=114399368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,519:0,42,255:17,0 chr2 114399369 . T . PASS END=114399369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 114399370 . G . PASS END=114399371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:18,0 chr2 114399372 . A . PASS END=114399372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 114399373 . A . PASS END=114399375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 114399376 . C . PASS END=114399376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 114399377 . G . PASS END=114399377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 114399378 . A . PASS END=114399378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 114399379 . T . PASS END=114399382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 114399383 . C . PASS END=114399383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr2 114399384 . T . PASS END=114399397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,560:0,51,255:17,0 chr2 114399398 . A . PASS END=114399398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr2 114399399 . G . PASS END=114399423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,560:0,40,255:18,0 chr2 114399424 . A . PASS END=114399424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,471:0,15,255:14,0 chr2 114399425 . T . PASS END=114399441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,531:0,48,255:16,0 chr2 114399608 . A . PASS END=114399611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1094:0,90,255:31,0 chr2 114399612 . T . PASS END=114399612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 114399613 . C . PASS END=114399706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:31:0,90,1350:0,93,255:40,0 chr2 114400767 . G . PASS END=114400769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 114400770 . T . PASS END=114400772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 114472721 . C . PASS END=114472772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:41:0,114,1710:0,122,255:40,0 chr2 114475352 . C . PASS END=114475383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:52:0,115,1800:0,115,255:40,0 chr2 114475384 . G . PASS END=114475427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,100,1455:0,100,255:40,0 chr2 114476731 . C . PASS END=114476885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:40:0,104,1405:0,104,255:40,0 chr2 114480681 . C . PASS END=114480767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:45:0,81,1215:0,131,255:40,0 chr2 114480768 . G . PASS END=114480769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:78:59:0,78,1170:0,122,255:26,0 chr2 114480770 . C . PASS END=114480771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:75:59:0,75,1125:0,144,255:25,0 chr2 114482955 . C . PASS END=114483114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:53:0,120,1800:0,121,255:40,0 chr2 114486978 . C . PASS END=114487082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:48:0,120,1800:0,134,255:40,0 chr2 114489161 . C . PASS END=114489225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,204,255:40,0 chr2 114490942 . A . PASS END=114490980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:114:0,120,1800:0,255,255:40,0 chr2 114492163 . C . PASS END=114492172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,188,255:40,0 chr2 114492173 . C . PASS END=114492250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:68:0,120,1800:0,164,255:40,0 chr2 114493354 . C . PASS END=114493435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:84:0,120,1800:0,228,255:40,0 chr2 114500254 . T . PASS END=114500275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,5:74:99:64:0,120,1800:0,139,255:40,0 chr2 114500276 . C . PASS END=114500276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,7:79:10:79:0,10,2405:0,10,255:40,10 chr2 114500277 . A . LowGQ END=114500277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,9:82:0:82:0,0,2418:74,0,255:40,7 chr2 114500278 . A . PASS END=114500278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,5:79:66:79:0,66,2600:0,66,255:40,0 chr2 114500279 . A . PASS END=114500456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:40:0,85,1350:0,85,255:40,0 chr2 114501290 . T . PASS END=114501371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:57:0,120,1800:0,158,255:40,0 chr2 114503854 . C . PASS END=114503916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:85:0,120,1800:0,194,255:40,0 chr2 114508002 . A . PASS END=114508145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:42:0,110,1506:0,110,255:40,0 chr2 114512742 . C . PASS END=114512883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:44:0,120,1800:0,130,255:40,0 chr2 114513031 . C . PASS END=114513121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,134,255:40,0 chr2 114513432 . C . PASS END=114513453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,117,1755:0,128,255:40,0 chr2 114513947 . C . PASS END=114513954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 114513955 . C . PASS END=114513955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:23,0 chr2 114513956 . C . PASS END=114513958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:24,0 chr2 114513959 . C . PASS END=114513959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr2 114513960 . C . PASS END=114513984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,809:0,69,255:24,0 chr2 114513985 . A . PASS END=114513986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr2 114647857 . A . PASS END=114647857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr2 114647858 . T . PASS END=114647862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 114647863 . G . PASS END=114647863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr2 114647864 . G . PASS END=114647876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1141:0,93,255:31,0 chr2 114647877 . C . PASS END=114647878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1124:0,77,255:26,0 chr2 114647879 . G . PASS END=114647889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:29:0,63,1035:0,63,255:25,0 chr2 114647890 . T . PASS END=114647890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr2 114647891 . G . PASS END=114647891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:22,0 chr2 114647892 . T . PASS END=114647892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr2 114647893 . G . PASS END=114647895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr2 114647896 . A . PASS END=114647896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 114647897 . C . PASS END=114647897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:15,0 chr2 114647898 . G . PASS END=114647900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,55,255:17,0 chr2 114670749 . G . PASS END=114670804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,176,255:40,0 chr2 114674461 . G . PASS END=114674585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:43:0,96,1440:0,113,255:40,0 chr2 114684922 . T . PASS END=114685032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,148,255:40,0 chr2 114688878 . A . PASS END=114688973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,151,255:40,0 chr2 114691856 . G . PASS END=114691858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 114691859 . G . PASS END=114691869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr2 114691870 . A . PASS END=114691870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 114691871 . G . PASS END=114691885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1080:0,87,255:31,0 chr2 114691886 . T . PASS END=114691886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 114691887 . C . PASS END=114691937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1155:0,80,255:35,0 chr2 114691938 . A . PASS END=114691963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 114697536 . G . PASS END=114697651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:33:0,93,1395:0,99,255:40,0 chr2 114697652 . A . PASS END=114697652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1465:0,71,255:35,0 chr2 114697653 . T . PASS END=114697674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1257:0,89,255:35,0 chr2 114697675 . T . PASS END=114697679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 114699763 . G . PASS END=114699936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:30:0,90,1103:0,90,255:40,0 chr2 114709056 . T . PASS END=114709148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,153,255:40,0 chr2 114709297 . A . PASS END=114709422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:30:0,86,1202:0,86,255:40,0 chr2 114713200 . C . PASS END=114713283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:64:0,120,1800:0,179,255:40,0 chr2 114714937 . C . PASS END=114715032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:50:0,118,1800:0,118,255:40,0 chr2 115200356 . A . PASS END=115200415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,150,255:40,0 chr2 115219665 . A . PASS END=115219717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:81:0,120,1800:0,227,255:40,0 chr2 115220972 . G . PASS END=115221003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:87:0,120,1800:0,254,255:40,0 chr2 115464694 . G . PASS END=115464699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,182,255:40,0 chr2 115464700 . T . PASS END=115464751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,177,255:40,0 chr2 115822335 . A . PASS END=115822382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:57:0,120,1800:0,123,255:40,0 chr2 115919534 . A . LowDepth END=115919576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,31:0,3,31:3,0 chr2 115919577 . G . PASS END=115919605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 115919811 . A . PASS END=115919817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr2 115919818 . A . PASS END=115919819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:17,0 chr2 115919820 . G . PASS END=115919820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 115919821 . T . PASS END=115919823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,61,255:19,0 chr2 115919824 . A . PASS END=115919824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:19,0 chr2 115919825 . G . PASS END=115919840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,61,255:19,0 chr2 115919841 . G . PASS END=115919841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:16,0 chr2 115919842 . G . PASS END=115919849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,675:0,44,255:16,0 chr2 116066815 . G . PASS END=116066929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:50:0,120,1663:0,120,255:40,1 chr2 116097241 . A . PASS END=116097292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,3:111:99:99:0,120,1800:0,255,255:40,0 chr2 116101393 . A . PASS END=116101488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:43:0,91,1527:0,91,255:40,0 chr2 116257086 . A . PASS END=116257180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:123,1:124:99:98:0,120,1800:0,251,255:40,0 chr2 116283474 . G . PASS END=116283548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:56:0,120,1800:0,158,255:40,0 chr2 116447263 . A . PASS END=116447315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:65:0,120,1800:0,195,255:40,0 chr2 116447416 . G . PASS END=116447497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:41:0,105,1575:0,123,255:40,0 chr2 116485392 . A . PASS END=116485512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:61:0,120,1800:0,167,255:40,0 chr2 116497315 . A . PASS END=116497441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:35:0,105,1212:0,105,255:40,0 chr2 116497442 . C . PASS END=116497464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:39:0,84,1260:0,93,255:40,0 chr2 116497465 . C . PASS END=116497469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 116503662 . G . PASS END=116503759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,108,1620:0,129,255:40,0 chr2 116510750 . A . PASS END=116510873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:48:0,120,1800:0,128,255:40,0 chr2 116520148 . A . PASS END=116520186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:70:0,120,1800:0,178,255:40,0 chr2 116525873 . A . PASS END=116525922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,206,255:40,0 chr2 116525923 . G . PASS END=116525959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:79:0,120,1800:0,213,255:40,0 chr2 116525960 . G A, 275.28 PASS DP=76;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,76,0:1.000,0.000:76:0,40,0:0,36,0:225:313,228,0,2905,228,2905:255,231,0:0,0:2.7528e+02,2.2528e+02,0.0000e+00,4.5000e+02,2.6005e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,47:0,0,37,39 chr2 116525961 . T . PASS END=116525980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:57:0,96,1800:0,96,255:40,0 chr2 116534784 . A . PASS END=116534875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:59:0,120,1800:0,154,255:40,0 chr2 116535363 . T . PASS END=116535410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,154,255:40,0 chr2 116538450 . T . PASS END=116538571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:82:0,120,1800:0,230,255:40,0 chr2 116539928 . G . PASS END=116539975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,185,255:40,0 chr2 116548657 . A . PASS END=116548755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,1:105:99:90:0,120,1800:0,207,255:40,2 chr2 116548863 . A . PASS END=116548932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,2:98:99:70:0,120,1800:0,192,255:40,0 chr2 116572369 . G . PASS END=116572563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:44:0,99,1485:0,132,255:40,0 chr2 116573251 . A . PASS END=116573305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:93:0,120,1800:0,247,255:40,0 chr2 116593733 . G . PASS END=116593742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:93:0,120,1800:0,252,255:40,0 chr2 116593743 . G . PASS END=116593832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:87:0,120,1800:0,220,255:40,0 chr2 116594083 . C . PASS END=116594141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,111,1543:0,113,255:40,0 chr2 116594250 . G . PASS END=116594322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,141,255:40,0 chr2 116598326 . C . PASS END=116598399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,155,255:40,0 chr2 116599787 . G . PASS END=116599889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:43:0,106,1800:0,106,255:40,0 chr2 116599890 . T . PASS END=116599921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,139,255:40,0 chr2 118572354 . A . PASS END=118572433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,101,1286:0,101,255:40,0 chr2 118572434 . T . PASS END=118572438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:37,0 chr2 118575020 . G . PASS END=118575177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:30:0,87,1305:0,90,255:40,0 chr2 118575178 . A . PASS END=118575214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,185,255:40,0 chr2 118575215 . C G, 48.13 PASS DP=91;MQ=243.23;MQRankSum=3.573;ReadPosRankSum=0.301;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,39,0:0.429,0.000:91:31,18,0:21,21,0:47:83,0,50,1310,1843,3152:255,0,255:40,0:4.8134e+01,8.8531e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,27,16,23:26,26,21,18 chr2 118575216 . C . PASS END=118575252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:78:0,120,1800:0,193,255:40,0 chr2 118575253 . T . PASS END=118575304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:58:0,120,1800:0,174,255:40,0 chr2 118577225 . A . PASS END=118577368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:80:32:0,80,1117:0,80,255:40,0 chr2 118578737 . G . PASS END=118578737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1235:0,102,255:34,0 chr2 118578738 . A . PASS END=118578872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:34:0,80,1189:0,80,255:40,0 chr2 118579226 . G . PASS END=118579326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,153,255:40,0 chr2 118579438 . G . PASS END=118579637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,140,255:40,0 chr2 118579723 . A . PASS END=118579837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:72:0,120,1800:0,172,255:40,0 chr2 118582145 . C . PASS END=118582145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 118582146 . A . PASS END=118582151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1163:0,84,255:31,0 chr2 118582152 . A . PASS END=118582152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 118582153 . C . PASS END=118582282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:31:0,90,1202:0,92,255:40,0 chr2 118582283 . A . PASS END=118582283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1183:0,69,255:34,0 chr2 118582284 . G . PASS END=118582284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 118582516 . G . PASS END=118582517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1133:0,90,255:33,0 chr2 118582518 . A . PASS END=118582518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:32,0 chr2 118582519 . T . PASS END=118582677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:34:0,87,1260:0,87,255:40,0 chr2 118583023 . G . PASS END=118583175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:39:0,87,1305:0,117,255:40,0 chr2 118583845 . G . PASS END=118583848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1135:0,80,255:32,0 chr2 118583849 . A . PASS END=118583849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:31,0 chr2 118583850 . T . PASS END=118583856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1016:0,82,255:33,0 chr2 118583857 . C . PASS END=118583857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr2 118583858 . G . PASS END=118583902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:34:0,99,1474:0,102,255:40,0 chr2 118583903 . T . PASS END=118583939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:47:0,109,1554:0,109,255:40,0 chr2 118583940 . C T, 50.00 PASS DP=47;MQ=243.07;MQRankSum=4.411;ReadPosRankSum=3.826;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,28,0:0.596,0.000:47:10,10,0:9,18,0:47:85,0,47,993,664,1657:255,0,255:17,0:5.0000e+01,8.9049e-05,4.9793e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,9,8,20:7,12,16,12 chr2 118583941 . T . PASS END=118583958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,108,1620:0,115,255:40,0 chr2 118586525 . G . PASS END=118586581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:87:0,120,1800:0,226,255:40,0 chr2 118586865 . C . PASS END=118587042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:91:35:0,91,1159:0,91,255:40,0 chr2 118588158 . A . PASS END=118588300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:87:51:0,87,1440:0,87,255:40,1 chr2 118593030 . A . PASS END=118593030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 118593031 . T . PASS END=118593036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 118593037 . G . PASS END=118593037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 118593038 . G . PASS END=118593142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:31:0,90,1172:0,93,255:40,0 chr2 118593143 . A . PASS END=118593179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1197:0,91,255:37,0 chr2 118593180 . C T, 50.00 PASS DP=37;MQ=250.00;MQRankSum=4.907;ReadPosRankSum=1.811;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,23,0:0.639,0.000:36:6,14,0:7,9,0:45:85,0,44,814,464,1279:255,0,255:10,0:5.0000e+01,1.3228e-04,4.6891e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,8,15:3,10,11,12 chr2 118593181 . A . PASS END=118593192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr2 118593961 . G . PASS END=118593975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,128,255:40,0 chr2 118593976 . T TGGAAGGACAGTCTTACCCGGACGCCACGGTGGTCTCCCGGCAGCCCTG,TG, 88.90 PASS DP=67;MQ=177.39;FractionInformativeReads=0.209 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0,0:1.000,0.000,0.000:14:0,8,0,0:0,6,0,0:40:121,43,0,736,169,248,626,42,744,608:255,0,255:40,29:8.8905e+01,3.9505e+01,4.8694e-04,4.5000e+02,1.9519e+02,2.4819e+02,4.5000e+02,7.3911e+01,4.5000e+02,4.5000e+02:0.00,29.00,32.00,29.00,58.00,32.00,34.77,63.77,63.77,37.77:0,0,10,4:0,0,8,6 chr2 118593977 . G . LowGQ END=118593977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,18:69:0:69:0,0,1286:255,0,255:40,0 chr2 118593978 . G . PASS END=118594019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:69:0,120,1800:0,177,255:40,0 chr2 118594020 . C . PASS END=118594052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,200,255:40,0 chr2 118594053 . G . PASS END=118594100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,167,255:40,0 chr2 118594231 . G . PASS END=118594240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 118594241 . C . PASS END=118594241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:13,0 chr2 118594242 . C . PASS END=118594254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 118594255 . T . PASS END=118594260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 118594261 . C . PASS END=118594265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 118594266 . A . PASS END=118594266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 118594267 . A . PASS END=118594267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 118594268 . G . PASS END=118594268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 118594269 . G . PASS END=118594269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 118594270 . C . PASS END=118594278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,552:0,48,255:17,0 chr2 118594279 . T . PASS END=118594279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 118594280 . C . PASS END=118594329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,621:0,51,255:19,0 chr2 118594330 . A . PASS END=118594330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,580:0,15,255:14,0 chr2 118594331 . C . PASS END=118594340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,520:0,31,255:13,0 chr2 118594341 . A . PASS END=118594343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 118594344 . T . LowGQ END=118594346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,449:0,0,255:14,0 chr2 118594347 . T . PASS END=118594350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 118594351 . G . PASS END=118594352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 118594353 . G . PASS END=118594353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 118594354 . A . PASS END=118594354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 118594355 . A . PASS END=118594363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 118594364 . G . PASS END=118594364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr2 118594365 . G . PASS END=118594385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 118594386 . A . PASS END=118594386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:9,0 chr2 118594387 . A . PASS END=118594391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 118594392 . C T, 48.91 PASS DP=10;MQ=239.19;MQRankSum=1.133;ReadPosRankSum=1.133;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,4,0:0.400,0.000:10:1,2,0:5,2,0:47:84,0,50,114,215,329:103,0,203:6,0:4.8913e+01,7.7400e-05,5.3000e+01,1.1427e+02,2.4939e+02,3.3189e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,1,3:6,0,3,1 chr2 118594393 . G . PASS END=118594409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 118594410 . T . PASS END=118594411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 118594412 . G . PASS END=118594416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 118677919 . T . PASS END=118677919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:33,0 chr2 118677920 . C . PASS END=118677920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:32,0 chr2 118677921 . A . PASS END=118677972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1143:0,83,255:35,0 chr2 118688613 . C . PASS END=118688716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:61:0,120,1800:0,156,255:40,1 chr2 118688717 . T . PASS END=118688726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:77:0,120,1800:0,204,255:40,0 chr2 118693071 . C . PASS END=118693155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,102,1377:0,102,255:40,0 chr2 118694278 . T . PASS END=118694315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:76:0,120,1800:0,207,255:40,0 chr2 118696605 . C . PASS END=118696687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:70:0,120,1800:0,197,255:40,0 chr2 118698765 . T . PASS END=118698873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,111,1674:0,111,255:40,0 chr2 118701600 . C . PASS END=118701662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:58:0,120,1800:0,174,255:40,0 chr2 118702309 . C . PASS END=118702369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,93,255:40,0 chr2 118702370 . T . PASS END=118702373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,77,255:26,0 chr2 118703105 . G . PASS END=118703137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1175:0,89,255:39,0 chr2 118703138 . C . PASS END=118703138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1365:0,51,255:36,0 chr2 118703139 . G . PASS END=118703149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,114,255:38,0 chr2 118703150 . G . PASS END=118703150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:29,0 chr2 118703151 . G . PASS END=118703158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1189:0,86,255:33,0 chr2 118704387 . C . PASS END=118704440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:71:0,120,1800:0,185,255:40,0 chr2 118704441 . T . PASS END=118704458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,228,255:40,0 chr2 118705681 . T . PASS END=118705762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,108,1620:0,122,255:40,0 chr2 118706898 . C . PASS END=118706916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,139,255:40,0 chr2 118706917 . C . PASS END=118706971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,114,1710:0,126,255:40,0 chr2 118709254 . T . PASS END=118709277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:72:0,120,1800:0,216,255:40,0 chr2 118709949 . C . PASS END=118709997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:39:0,87,1305:0,90,255:40,0 chr2 118709998 . T . PASS END=118709998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:28,0 chr2 118709999 . G . PASS END=118710001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,97,255:29,0 chr2 118710002 . T . PASS END=118710003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:74:35:0,74,1170:0,74,255:26,0 chr2 118710004 . G . PASS END=118710008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:27,0 chr2 118710009 . C . PASS END=118710011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 118715941 . C . PASS END=118715949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:34:0,100,1227:0,100,255:39,0 chr2 118715950 . A . PASS END=118715950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1096:0,64,255:38,0 chr2 118715951 . T . PASS END=118716057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:40:0,87,1346:0,87,255:40,0 chr2 118731484 . C . PASS END=118731488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 118731489 . C . PASS END=118731489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 118731490 . T . PASS END=118731499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1013:0,87,255:30,0 chr2 118731500 . G . PASS END=118731500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 118731501 . A . PASS END=118731515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:32,0 chr2 118731516 . T . PASS END=118731516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1062:0,79,255:27,0 chr2 118731517 . C . PASS END=118731521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:28,0 chr2 118731522 . C . PASS END=118731526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 118731527 . C . PASS END=118731528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 118731529 . G . PASS END=118731534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr2 118731535 . C . PASS END=118731535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 118731536 . A . PASS END=118731538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 118731539 . A . PASS END=118731539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,894:0,54,255:25,0 chr2 118731540 . T . PASS END=118731541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr2 118731542 . T . PASS END=118731542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,834:0,42,255:26,0 chr2 118731543 . G . PASS END=118731546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 118731547 . C . PASS END=118731568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,923:0,65,255:26,0 chr2 118731569 . C . PASS END=118731570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:18,0 chr2 118732426 . C . PASS END=118732476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:37:0,85,1421:0,85,255:40,0 chr2 118732764 . C . PASS END=118732856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,116,1747:0,116,255:40,0 chr2 118735570 . C . PASS END=118735606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:55:0,120,1800:0,127,255:40,0 chr2 118743545 . C . PASS END=118743645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:38:0,87,1305:0,98,255:40,0 chr2 118753022 . T . PASS END=118753078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:50:0,120,1800:0,136,255:40,0 chr2 118753840 . C . PASS END=118753938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:34:0,81,1197:0,81,255:40,0 chr2 118758397 . C . PASS END=118758508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:43:0,120,1800:0,128,255:40,0 chr2 118764298 . A . PASS END=118764392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:54:0,120,1800:0,157,255:40,0 chr2 118766121 . C . PASS END=118766234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:63:0,120,1800:0,189,255:40,2 chr2 118771530 . C . PASS END=118771538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 118771539 . A . PASS END=118771563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr2 118771564 . A . PASS END=118771564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 118771565 . A . PASS END=118771565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 118771566 . C A, 48.97 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=2.849;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:6,3,0:5,5,0:48:84,0,50,273,382,656:223,0,255:11,0:4.8966e+01,7.6882e-05,5.3000e+01,2.7308e+02,4.1720e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,3,2,6:5,6,5,3 chr2 118771567 . C . PASS END=118771591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,657:0,41,255:19,0 chr2 118771592 . A . PASS END=118771599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,715:0,63,255:21,0 chr2 118771600 . G . PASS END=118771600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 118771601 . C . PASS END=118771603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 118771604 . A . PASS END=118771617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 118771618 . C . PASS END=118771618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 118771619 . C . PASS END=118771620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 118771621 . G . PASS END=118771621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 118771622 . A . PASS END=118771625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 118771626 . A . PASS END=118771626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 118771627 . G . PASS END=118771661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 118771662 . T . PASS END=118771662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 118771663 . A G, 101.18 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,7,0:0,11,0:51:139,54,0,698,54,698:255,54,0:0,0:1.0118e+02,5.1175e+01,3.3134e-05,4.5000e+02,8.5945e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,10:0,0,7,11 chr2 118771664 . C . PASS END=118771664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 118771665 . A . PASS END=118771665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr2 118771666 . A . PASS END=118771672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 118771673 . A . PASS END=118771680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:17:0,30,450:0,34,255:13,1 chr2 118771681 . C . PASS END=118771681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:19:18:0,19,624:0,19,255:10,1 chr2 118771682 . TGCC T, 3.91 DRAGENIndelHardQUAL DP=17;MQ=250.00;MQRankSum=2.700;ReadPosRankSum=0.077;FractionInformativeReads=0.765;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,4,0:0.308,0.000:13:4,2,0:5,2,0:4:11,0,50,38,201,238:97,0,255:8,4:3.9123e+00,2.2638e+00,5.5264e+01,6.5660e+01,2.3779e+02,2.6946e+02:0.00,9.00,12.00,34.77,43.77,37.77:3,6,2,2:4,5,2,2 chr2 118771683 . G . LowGQ END=118771686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:14:0,0,300:56,0,255:11,4 chr2 118771687 . C . PASS END=118771706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 118771707 . G . PASS END=118771707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,1 chr2 118771708 . C . PASS END=118771710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:4:13:0,4,392:0,4,255:11,1 chr2 118771711 . G . PASS END=118771712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr2 118771713 . C . PASS END=118771716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 118771717 . A . PASS END=118771717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,366:0,22,255:10,0 chr2 118771718 . G . PASS END=118771718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 118771719 . C . LowGQ END=118771719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr2 118771720 . G . PASS END=118771721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 118771722 . C . PASS END=118771728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,360:0,20,255:9,0 chr2 118771729 . G . PASS END=118771731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr2 118771732 . C . PASS END=118771732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:9:12:0,9,135:0,36,255:3,0 chr2 118771733 . A . LowGQ END=118771739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:0:7:0,0,90:0,0,255:3,0 chr2 118838410 . A . PASS END=118838410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 118854133 . A . PASS END=118854134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 118854135 . G . PASS END=118854137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 118854138 . A . PASS END=118854138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr2 118854139 . G . PASS END=118854139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 118854140 . A . PASS END=118854143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 118854144 . A . PASS END=118854144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 118854145 . G . PASS END=118854145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 118854146 . A . PASS END=118854146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr2 118854147 . G . PASS END=118854150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,842:0,75,255:26,0 chr2 118854151 . G . PASS END=118854366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:29:0,87,1086:0,87,255:40,0 chr2 118854367 . A . PASS END=118854375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:60:32:0,60,900:0,83,255:25,0 chr2 118854376 . G . PASS END=118854376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,855:0,80,255:18,0 chr2 118860773 . C . PASS END=118860897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:56:0,120,1800:0,132,255:40,0 chr2 118864313 . A . PASS END=118864479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:95:37:0,95,1327:0,95,255:40,0 chr2 118864666 . A . PASS END=118864765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,99,1299:0,99,255:40,0 chr2 118865857 . T . PASS END=118865938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:120,0:120:99:87:0,120,1800:0,212,255:40,0 chr2 119600514 . C . PASS END=119600531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:18,0 chr2 119600532 . G . PASS END=119600538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,868:0,72,255:26,0 chr2 119600539 . A . PASS END=119600539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr2 119600540 . C . PASS END=119600548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr2 119600549 . T . PASS END=119600551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 119600552 . A . PASS END=119600552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:25,0 chr2 119600553 . G . PASS END=119600558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1069:0,71,255:26,0 chr2 119600559 . G . PASS END=119600568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1139:0,87,255:31,0 chr2 119600569 . T . PASS END=119600569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 119600570 . G . PASS END=119600578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 119600579 . G . PASS END=119600579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:28,0 chr2 119600580 . G . PASS END=119600599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1133:0,82,255:32,0 chr2 119600600 . T . PASS END=119600600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 119600601 . G . PASS END=119600602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 119600603 . T . PASS END=119600603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 119600604 . G . PASS END=119600607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 119600608 . G . PASS END=119600613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 119600614 . T . PASS END=119600620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:28,0 chr2 119600621 . T . PASS END=119600622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,976:0,68,255:28,0 chr2 119600623 . T . PASS END=119600628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 119600629 . C . PASS END=119600629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 119600630 . G . PASS END=119600630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 119600631 . C . PASS END=119600631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr2 119600632 . T . PASS END=119600632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 119600633 . T . PASS END=119600633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:28,0 chr2 119600634 . G . PASS END=119600644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1048:0,87,255:29,0 chr2 119600645 . A . PASS END=119600648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 119600649 . C . PASS END=119600649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 119600650 . T . PASS END=119600654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 119600655 . C . PASS END=119600656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 119600657 . G . PASS END=119600657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 119600658 . G . PASS END=119600658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 119600659 . G . PASS END=119600660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 119600661 . C . PASS END=119600664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,984:0,81,255:27,0 chr2 119600665 . T . PASS END=119600674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:26,0 chr2 119600675 . G . PASS END=119600675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,825:0,51,255:21,0 chr2 119600676 . T . PASS END=119600676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,867:0,70,255:25,0 chr2 119600677 . T . PASS END=119600677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:34:30:0,34,836:0,34,255:24,0 chr2 119600678 . C . PASS END=119600678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:25,0 chr2 119600679 . C . PASS END=119600679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 119600680 . T . PASS END=119600680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:23,0 chr2 119600681 . G . PASS END=119600681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:23,0 chr2 119600682 . G . PASS END=119600684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:25,0 chr2 119600685 . C . PASS END=119600685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 119600686 . A . PASS END=119600686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:24,0 chr2 119600687 . G . PASS END=119600687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 119600688 . G . PASS END=119600690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,0 chr2 119600691 . C . PASS END=119600691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 119600692 . T . PASS END=119600694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr2 119600695 . C . PASS END=119600695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 119600696 . G . PASS END=119600697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,953:0,42,255:22,0 chr2 119600698 . C . PASS END=119600699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr2 119600700 . C . PASS END=119600701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,59,255:19,0 chr2 119600702 . G . PASS END=119600702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 119600703 . C . PASS END=119600705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 119600706 . C . PASS END=119600707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 119600708 . T . PASS END=119600717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,56,255:19,0 chr2 119600718 . G . PASS END=119600718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,742:0,33,255:17,0 chr2 119600719 . T . PASS END=119600735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,532:0,40,255:18,0 chr2 119600736 . C . PASS END=119600736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 119600737 . T . PASS END=119600746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 119600747 . G . PASS END=119600747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 119600748 . C . PASS END=119600761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 119600762 . T . PASS END=119600764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 119600765 . A . PASS END=119600765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr2 119600766 . C . PASS END=119600773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 119600774 . G . PASS END=119600774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 119600775 . C . PASS END=119600776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 119600777 . G . PASS END=119600777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 119600778 . C . PASS END=119600786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr2 119600787 . C . PASS END=119600791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 119600792 . T . PASS END=119600793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr2 119600794 . T . PASS END=119600797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 119600798 . T . PASS END=119600798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 119600799 . C . PASS END=119600800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:12,0 chr2 119600801 . T . LowGQ END=119600802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,341:0,0,255:14,0 chr2 119600803 . T . PASS END=119600804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,426:0,12,255:12,0 chr2 119600805 . C . PASS END=119600805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,370:0,6,255:13,0 chr2 119600806 . T . PASS END=119600806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 119600807 . T . PASS END=119600807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr2 119600808 . C . LowGQ END=119600812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,235:2,0,255:12,0 chr2 119600813 . G . PASS END=119600813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 119600814 . C . LowGQ END=119600819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,186:5,0,255:10,0 chr2 119600820 . G . PASS END=119600821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 119600822 . T . LowGQ END=119600822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,324:58,0,255:9,0 chr2 119600823 . G . PASS END=119600823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 119600824 . C . LowGQ END=119600824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,188:105,0,255:9,0 chr2 119600825 . G . PASS END=119600825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 119600826 . C . LowGQ END=119600826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,320:23,0,255:7,0 chr2 119600827 . G . PASS END=119600828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:9,0 chr2 119600829 . A . LowGQ END=119600830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,257:17,0,255:7,0 chr2 119603882 . C . PASS END=119603942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:11,0 chr2 119603943 . C . PASS END=119603956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 119603957 . T . PASS END=119603957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 119603958 . G . PASS END=119603969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 119603970 . G . PASS END=119603973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 119603974 . T . PASS END=119603987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr2 119603988 . A . PASS END=119603990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 119603991 . T . PASS END=119603993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 119603994 . G . PASS END=119603994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 119603995 . A . PASS END=119603995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 119603996 . T . PASS END=119603996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 119603997 . A . PASS END=119603997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 119603998 . G . LowGQ END=119603998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:8,0 chr2 119603999 . C . PASS END=119604000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 119604001 . G . PASS END=119604003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 119604004 . T . LowGQ END=119604004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:4,0,255:7,0 chr2 119604005 . T . PASS END=119604005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 119604006 . G . PASS END=119604008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 119604009 . G . PASS END=119604009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:6,0 chr2 119604010 . T . PASS END=119604010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 119604011 . G . PASS END=119604013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:9:0,11,270:0,11,255:7,0 chr2 119604014 . C . PASS END=119604018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 119604019 . T . PASS END=119604019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr2 119604020 . A . PASS END=119604039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 119604040 . G . PASS END=119604073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:6,0 chr2 119604074 . C . LowDepth;LowGQ END=119604147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 119604148 . G . PASS END=119604152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 119604153 . G . PASS END=119604159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 119604160 . G . PASS END=119604189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr2 119604190 . G . PASS END=119604217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr2 119604218 . T . PASS END=119604232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,668:0,43,255:19,0 chr2 119604233 . A . PASS END=119604254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,721:0,60,255:22,0 chr2 119604255 . C T, 48.41 PASS DP=22;MQ=250.00;MQRankSum=3.873;ReadPosRankSum=3.139;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,9,0:0.409,0.000:22:5,5,0:8,4,0:47:83,0,50,322,465,787:255,0,255:12,0:4.8412e+01,8.4389e-05,5.3000e+01,3.2189e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,5,4:3,10,3,6 chr2 119604256 . G . PASS END=119604260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 119604261 . G . PASS END=119604261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 119604262 . G . PASS END=119604274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr2 119604275 . G . PASS END=119604275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 119604276 . G . PASS END=119604280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr2 119604281 . G . PASS END=119604281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:24,0 chr2 119604282 . G . PASS END=119604282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 119604283 . T . PASS END=119604283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 119604284 . C . PASS END=119604292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 119604293 . C . PASS END=119604312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,878:0,61,255:23,0 chr2 119604313 . C . PASS END=119604314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 119604315 . C . PASS END=119604335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 119604336 . T . PASS END=119604363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,627:0,50,255:18,0 chr2 119604364 . A . PASS END=119604364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 119604365 . G . PASS END=119604369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 119604370 . T . PASS END=119604414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr2 119604415 . A . PASS END=119604415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 119604416 . T . PASS END=119604424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 119604425 . T . PASS END=119604425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 119604426 . G . PASS END=119604432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 119604433 . T . PASS END=119604433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:11,0 chr2 119604434 . T . PASS END=119604435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 119604436 . G . PASS END=119604436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 119604437 . T . PASS END=119604439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,419:0,36,255:12,0 chr2 119604440 . T . PASS END=119604440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 119604441 . G . PASS END=119604441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 119604442 . C . PASS END=119604444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr2 119604445 . T . LowGQ END=119604445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:7,0 chr2 119604446 . G . PASS END=119604465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:20:9:0,20,315:0,20,255:9,0 chr2 119604466 . G . PASS END=119604469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 119604470 . G . PASS END=119604473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 119604474 . A . PASS END=119604474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 119604475 . G . PASS END=119604476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 119604477 . A . PASS END=119604478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 119604479 . G . PASS END=119604486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 119604487 . A . PASS END=119604487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:3,0 chr2 119604488 . G . PASS END=119604488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr2 119604489 . A . PASS END=119604489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:3,0 chr2 119604490 . T . PASS END=119604497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:4,0 chr2 119604498 . C . LowGQ END=119604498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 119604499 . G . PASS END=119604500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 119604501 . C . LowGQ END=119604511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:0,0,82:3,0 chr2 119604512 . G . PASS END=119604513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,172:6,0 chr2 119604514 . T . PASS END=119604514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:5,0 chr2 119604515 . G . PASS END=119604522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr2 119604523 . A . LowGQ END=119604523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:4,0 chr2 119604524 . G . PASS END=119604532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:5,0 chr2 119604533 . G . LowGQ END=119604533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr2 119604534 . G . PASS END=119604534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 119604535 . T . LowGQ END=119604535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr2 119604536 . G . PASS END=119604543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 119604544 . G . LowGQ END=119604544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:4,0 chr2 119604545 . G . PASS END=119604549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr2 119604550 . A . LowGQ END=119604551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:0:5:0,0,116:0,0,140:3,0 chr2 119604552 . G . PASS END=119604556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr2 119604557 . G . LowGQ END=119604557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 119604558 . C . PASS END=119604571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,141:5,0 chr2 119604572 . A . LowGQ END=119604572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:3,0 chr2 119604573 . G . PASS END=119604580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr2 119604581 . C . LowGQ END=119604581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 119604582 . A . PASS END=119604592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 119604593 . A . PASS END=119604593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr2 119604594 . C . PASS END=119604617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,127:0,15,127:5,0 chr2 119604618 . G . LowGQ END=119604618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 119604619 . C . PASS END=119604632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 119604633 . G . LowGQ END=119604633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 119604634 . C . PASS END=119604648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr2 119604649 . C . PASS END=119604649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 119604650 . T . PASS END=119604663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,188:5,0 chr2 119604664 . A . PASS END=119604664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 119604665 . G . PASS END=119604731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,164:0,15,164:5,0 chr2 119604732 . C . PASS END=119604743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:3:0,9,116:0,9,116:3,0 chr2 119699877 . A . PASS END=119699973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:97:45:0,97,1536:0,97,255:40,0 chr2 119726736 . T . PASS END=119726837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:93:40:0,93,1395:0,100,255:40,0 chr2 119727690 . T . PASS END=119727695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,613:0,51,255:17,0 chr2 119727696 . A . PASS END=119727696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:15,0 chr2 119727697 . T . PASS END=119727706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,615:0,51,255:18,0 chr2 119727707 . C . PASS END=119727707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:17,0 chr2 119727708 . G . PASS END=119727708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 119727709 . G . PASS END=119727711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 119727712 . C . PASS END=119727712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 119727713 . C . PASS END=119727716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 119727717 . T . PASS END=119727717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 119727718 . C . PASS END=119727738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,712:0,60,255:23,0 chr2 119727739 . T . PASS END=119727739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 119727740 . G . PASS END=119727744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 119727745 . T . PASS END=119727745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 119727746 . C . PASS END=119727756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr2 119727757 . G . PASS END=119727762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 119727763 . C . PASS END=119727768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 119727769 . C . PASS END=119727773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 119727774 . C . PASS END=119727775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 119727776 . T . PASS END=119727776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 119727777 . T . PASS END=119727777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 119727778 . G . PASS END=119727779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 119727780 . T . PASS END=119727782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 119727783 . A . PASS END=119727785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 119727786 . C . PASS END=119727786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 119727787 . A . PASS END=119727855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1125:0,82,255:32,0 chr2 119727856 . G . PASS END=119727857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1088:0,41,255:28,0 chr2 119727858 . T . PASS END=119727875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 119727876 . A . PASS END=119727877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr2 119727878 . T . PASS END=119727883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 119727884 . C . PASS END=119727893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:26,0 chr2 119727894 . A . PASS END=119727894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 119727895 . C . PASS END=119727904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 119727905 . C . PASS END=119727915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 119729075 . G . PASS END=119729110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr2 119731909 . G . PASS END=119731909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 119731910 . T . PASS END=119731910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 119731911 . C . PASS END=119731915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr2 119731916 . A . PASS END=119731916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 119731917 . G . PASS END=119731921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 119731922 . C . PASS END=119732004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1063:0,84,255:40,0 chr2 119732005 . A . PASS END=119732016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1480:0,104,255:38,0 chr2 119732097 . G . PASS END=119732141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:35,0 chr2 119735047 . G . PASS END=119735091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,109,1484:0,109,255:40,0 chr2 119735404 . G . PASS END=119735511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:37:0,90,1350:0,96,255:40,0 chr2 119735765 . G . PASS END=119735967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,108,1659:0,108,255:40,0 chr2 119738985 . G . PASS END=119738991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,543:0,45,255:18,0 chr2 119738992 . A . PASS END=119738992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,485:0,37,255:17,0 chr2 119738993 . G . PASS END=119738998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr2 119738999 . A . PASS END=119739003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 119739004 . C . PASS END=119739007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 119739008 . A . PASS END=119739008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:16,0 chr2 119739009 . A . PASS END=119739019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,662:0,57,255:19,0 chr2 119739020 . G . PASS END=119739021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 119739022 . G . PASS END=119739022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:20,0 chr2 119739023 . G . PASS END=119739029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:26,0 chr2 119739030 . G . PASS END=119739036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,934:0,81,255:31,0 chr2 119739037 . T . PASS END=119739037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 119739038 . G . PASS END=119739053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1149:0,93,255:38,0 chr2 119739054 . A . PASS END=119739054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1349:0,70,255:36,0 chr2 119739055 . A . PASS END=119739064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:37,0 chr2 119739065 . G . PASS END=119739065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr2 119739066 . G . PASS END=119739083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,102,1396:0,111,255:38,0 chr2 119739197 . G . PASS END=119739231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,115,1521:0,115,255:40,0 chr2 119739232 . G . PASS END=119739232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 119739732 . G . PASS END=119739761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,488:0,39,255:13,0 chr2 119739762 . C . PASS END=119739830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:18,0 chr2 119739924 . G . PASS END=119739943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,847:0,69,255:26,0 chr2 119739944 . A . PASS END=119739971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1064:0,83,255:32,0 chr2 119739972 . G . PASS END=119739974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 119739975 . A . PASS END=119739975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:29,0 chr2 119739976 . A . PASS END=119739977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1012:0,57,255:30,0 chr2 119739978 . G . PASS END=119739978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 119739979 . G . PASS END=119739980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 119739981 . A . PASS END=119739986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 119748165 . G . PASS END=119748165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 119748166 . A . LowGQ END=119748171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,12:58:0:55:0,0,1309:9,0,255:40,0 chr2 119748172 . A . PASS END=119748172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:78:59:0,78,1827:0,78,255:40,0 chr2 119748173 . G . PASS END=119748173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:17:59:0,17,1714:0,17,255:40,0 chr2 119748174 . G . PASS END=119748174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:99:59:0,111,1939:0,111,255:40,0 chr2 119748175 . A . PASS END=119748175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,9:59:14:59:0,14,1715:0,14,255:40,0 chr2 119748176 . C . PASS END=119748176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:66:59:0,66,1828:0,66,255:40,0 chr2 119748177 . A . LowGQ END=119748177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,9:59:0:59:0,0,1620:1,0,255:40,0 chr2 119748178 . G . PASS END=119748178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:27:59:0,27,1723:0,27,255:40,0 chr2 119748179 . C . PASS END=119748179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:72:59:0,72,1813:0,72,255:40,0 chr2 119748180 . A . LowGQ END=119748180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,9:59:0:59:0,0,1596:53,0,255:40,0 chr2 119748181 . A . PASS END=119748181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:27:59:0,27,1747:0,27,255:40,0 chr2 119748182 . G . PASS END=119748182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:39:59:0,39,1787:0,39,255:40,0 chr2 119748183 . G . PASS END=119748183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:74:59:0,74,1885:0,74,255:40,0 chr2 119748184 . A . PASS END=119748184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:47:59:0,47,1749:0,47,255:40,0 chr2 119748185 . A . PASS END=119748185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:61:59:0,61,1795:0,61,255:40,0 chr2 119748186 . G . PASS END=119748186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:25:59:0,25,1811:0,25,255:40,0 chr2 119748187 . A . LowGQ END=119748187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,9:59:0:59:0,0,1677:8,0,255:40,0 chr2 119748188 . A . PASS END=119748188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:78:59:0,78,1859:0,78,255:40,0 chr2 119748189 . A . PASS END=119748190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:89:59:0,89,1860:0,89,255:40,0 chr2 119748191 . G . PASS END=119748191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:27:59:0,27,1800:0,27,255:40,0 chr2 119748192 . G . PASS END=119748192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,7:60:50:60:0,50,1836:0,50,255:40,0 chr2 119748193 . A . LowGQ END=119748193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,9:60:0:60:0,0,1693:19,0,255:40,0 chr2 119748194 . G . PASS END=119748194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:96:59:0,96,1880:0,96,255:40,0 chr2 119748195 . A . PASS END=119748195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,8:58:5:58:0,5,1679:0,5,255:40,0 chr2 119748196 . A . PASS END=119748197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,6:58:53:58:0,53,1846:0,53,255:40,0 chr2 119748198 . C . PASS END=119748198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:71:58:0,71,1825:0,71,255:40,0 chr2 119748199 . A . PASS END=119748203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:80:58:0,80,1800:0,80,255:40,0 chr2 119748204 . T . PASS END=119748204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:48:59:0,48,1392:0,48,255:40,0 chr2 119748205 . T . PASS END=119748208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:89:59:0,89,1800:0,89,255:40,0 chr2 119748209 . G . PASS END=119748209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:56:59:0,56,1881:0,56,255:40,0 chr2 119749347 . T . PASS END=119749439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:41:0,93,1351:0,93,255:40,0 chr2 119749440 . A . PASS END=119749451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1485:0,101,255:37,0 chr2 119750008 . G . PASS END=119750052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,141,255:40,0 chr2 119750700 . G . PASS END=119750713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1000:0,72,255:26,0 chr2 119750714 . T . PASS END=119750714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 119750715 . C . PASS END=119750715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr2 119750716 . C . PASS END=119750852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,84,255:40,0 chr2 119750853 . G . PASS END=119750856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 119750857 . C . PASS END=119750857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:24,0 chr2 119750858 . C . PASS END=119750861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 119750862 . A . PASS END=119750862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:23,0 chr2 119750863 . C . PASS END=119750864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:22,0 chr2 119750865 . A . PASS END=119750865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:21,0 chr2 119750866 . A . PASS END=119750876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 119751963 . G . PASS END=119751966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 119751967 . T . PASS END=119751967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 119751968 . G . PASS END=119751971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 119751972 . A . PASS END=119751972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 119751973 . G . PASS END=119751999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,636:0,41,255:19,0 chr2 119752000 . G . PASS END=119752000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 119752001 . G . PASS END=119752001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 119752002 . G . PASS END=119752005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 119752006 . G . PASS END=119752006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 119752007 . G . PASS END=119752007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 119752008 . A . PASS END=119752008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 119752009 . G . PASS END=119752009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 119752010 . A . PASS END=119752010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 119752011 . G . PASS END=119752016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 119752017 . T . PASS END=119752017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 119752018 . G . PASS END=119752023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 119752024 . C . PASS END=119752024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 119752025 . T . PASS END=119752030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 119752031 . A . PASS END=119752031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 119752032 . A . PASS END=119752052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,862:0,66,255:24,0 chr2 119752053 . A . PASS END=119752053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 119752054 . C . PASS END=119752059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 119752060 . C . PASS END=119752060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 119752061 . C . PASS END=119752068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 119752069 . G . PASS END=119752069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 119752070 . G . PASS END=119752073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 119752074 . C . PASS END=119752081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:17,0 chr2 119752082 . G . PASS END=119752091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,540:0,32,255:13,0 chr2 119752092 . T . PASS END=119752094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 119752095 . G . PASS END=119752096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 119914378 . C . PASS END=119914380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:31,0 chr2 119914381 . A . PASS END=119914381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:29,0 chr2 119914382 . T . PASS END=119914405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:32:0,91,1158:0,91,255:37,0 chr2 119914406 . A . PASS END=119914406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1115:0,39,255:33,0 chr2 119914407 . A . PASS END=119914521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:34:0,81,1215:0,87,255:40,0 chr2 119914522 . C . PASS END=119914542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr2 119914543 . G . PASS END=119914543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 119914544 . G . PASS END=119914551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 119914552 . C . PASS END=119914553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:19,0 chr2 119914554 . G . PASS END=119914554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:15,0 chr2 119914555 . G . PASS END=119914557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 119915162 . C . PASS END=119915178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,893:0,72,255:25,0 chr2 119915179 . G . PASS END=119915216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:31,0 chr2 119915217 . A . PASS END=119915217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr2 119915218 . G . PASS END=119915237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1028:0,87,255:30,0 chr2 119915238 . T . PASS END=119915238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 119915239 . A . PASS END=119915242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 119915243 . G . PASS END=119915243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 119915244 . C . PASS END=119915268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 119915269 . C . PASS END=119915272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 119915273 . G . PASS END=119915274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 119915275 . T . PASS END=119915284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,90,255:25,0 chr2 119915285 . G . PASS END=119915287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr2 119915288 . A . PASS END=119915294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 119915295 . A . PASS END=119915295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 119915296 . G . PASS END=119915312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 119915313 . T . PASS END=119915313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 119915314 . C . PASS END=119915330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 119915331 . T . PASS END=119915443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,560:0,44,255:19,0 chr2 119915444 . G . PASS END=119915461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,459:0,36,255:13,0 chr2 119915462 . G . LowGQ END=119915462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,382:0,0,255:11,0 chr2 119915463 . C . PASS END=119915484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 119915485 . G . PASS END=119915486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 119915487 . T . PASS END=119915488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 119915489 . C . PASS END=119915489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:12,0 chr2 119915490 . A . PASS END=119915490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 119915491 . G . PASS END=119915506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr2 119915507 . C . PASS END=119915509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,535:0,31,255:13,0 chr2 119915510 . C . PASS END=119915514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 119915515 . A . PASS END=119915515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 119915516 . G . PASS END=119915533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 119915534 . A . PASS END=119915534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 119915535 . G . PASS END=119915535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 119915536 . G . PASS END=119915540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 119915541 . C . PASS END=119915541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 119915542 . T . PASS END=119915550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 119915551 . G . PASS END=119915551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 119915552 . C . PASS END=119915553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 119915554 . G . PASS END=119915554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 119915555 . G . PASS END=119915556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 119915557 . C . PASS END=119915557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 119915558 . C . PASS END=119915560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 119915561 . C . PASS END=119915580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,466:0,39,255:13,0 chr2 119915581 . G . PASS END=119915589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 119915590 . T . PASS END=119915621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr2 119915622 . T . PASS END=119915622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,396:0,8,255:12,0 chr2 119915623 . G . PASS END=119915629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 119915630 . A . PASS END=119915630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 119915631 . G . PASS END=119915631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 119915632 . G . PASS END=119915632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 119915633 . A . PASS END=119915643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 119915644 . T . PASS END=119915644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 119915645 . G . PASS END=119915648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 119915649 . C . PASS END=119915649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 119915650 . T . PASS END=119915650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 119915651 . G . PASS END=119915651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 119915652 . A . PASS END=119915653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 119915654 . G . PASS END=119915662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 119915663 . G . PASS END=119915663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 119915664 . A . PASS END=119915681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 119915682 . C . PASS END=119915689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 119915690 . G . PASS END=119915690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 119915691 . G . PASS END=119915695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 119915696 . C . PASS END=119915704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 119915705 . T . PASS END=119915715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 119915716 . G . PASS END=119915716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr2 119915717 . C . PASS END=119915717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr2 119915718 . T . PASS END=119915728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 119915729 . C . PASS END=119915729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:12,0 chr2 119915730 . G . PASS END=119915753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr2 119915754 . A . PASS END=119915762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 119915763 . G . PASS END=119915767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 119915768 . C . PASS END=119915768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,411:0,25,255:11,0 chr2 119915769 . A . PASS END=119915773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 119915774 . C . PASS END=119915791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 119915792 . T . PASS END=119915802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 119915803 . C . PASS END=119915805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,310:0,24,255:8,0 chr2 119915806 . G . PASS END=119915806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 119915807 . C . PASS END=119915819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 119915820 . A . PASS END=119915843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr2 119915844 . A . PASS END=119915845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,233:3,0 chr2 119988589 . A . PASS END=119988610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,114,1684:0,114,255:40,0 chr2 120003065 . C . PASS END=120003066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr2 120003067 . A . PASS END=120003067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,543:0,20,255:16,0 chr2 120003068 . C . PASS END=120003077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr2 120003078 . A . PASS END=120003078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:18,0 chr2 120003079 . G . PASS END=120003081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 120003082 . G . PASS END=120003083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 120003084 . G . PASS END=120003090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,699:0,47,255:18,0 chr2 120003091 . A . PASS END=120003091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:16,0 chr2 120003092 . A . PASS END=120003095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,892:0,69,255:24,0 chr2 120003096 . A . PASS END=120003096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 120003097 . C . PASS END=120003121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,870:0,62,255:25,0 chr2 120003122 . G . PASS END=120003122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:22,0 chr2 120003123 . C . PASS END=120003125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 120003126 . T . PASS END=120003126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 120003127 . A . PASS END=120003140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 120003141 . G . PASS END=120003141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 120003142 . G . PASS END=120003152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,914:0,72,255:24,0 chr2 120003153 . G . PASS END=120003153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr2 120003154 . G . PASS END=120003159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 120003160 . A . PASS END=120003160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr2 120003161 . A . PASS END=120003167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr2 120003168 . C . PASS END=120003170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 120003171 . C . PASS END=120003172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 120003173 . T . PASS END=120003183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 120003184 . G . PASS END=120003192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 120003193 . C . PASS END=120003193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 120003194 . G . PASS END=120003202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 120003203 . C . PASS END=120003203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 120003204 . C . PASS END=120003228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,776:0,63,255:24,0 chr2 120003229 . A . PASS END=120003229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 120003230 . A . PASS END=120003239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 120003240 . G . PASS END=120003240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 120003241 . G . PASS END=120003246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 120003247 . C . PASS END=120003247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:21,0 chr2 120003248 . G . PASS END=120003260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,717:0,66,255:23,0 chr2 120003261 . C . PASS END=120003261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 120003262 . A . PASS END=120003276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,941:0,69,255:26,0 chr2 120003277 . C . PASS END=120003280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 120003281 . C . PASS END=120003286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 120003287 . C . PASS END=120003287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr2 120003288 . C . PASS END=120003292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1108:0,84,255:29,0 chr2 120003293 . T . PASS END=120003293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 120003294 . G . PASS END=120003296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 120003297 . T . PASS END=120003297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 120003298 . T . PASS END=120003302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr2 120003303 . A . PASS END=120003303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr2 120003304 . G . PASS END=120003306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 120003307 . G . PASS END=120003307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 120003308 . A . PASS END=120003309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:26,0 chr2 120003310 . G . PASS END=120003311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 120003312 . A . PASS END=120003313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1033:0,49,255:26,0 chr2 120003314 . T . PASS END=120003319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1031:0,71,255:25,0 chr2 120003320 . C . PASS END=120003322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:27,0 chr2 120003323 . C . PASS END=120003323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr2 120003324 . G . PASS END=120003325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 120003326 . A . PASS END=120003326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr2 120003327 . G . PASS END=120003330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,984:0,81,255:27,0 chr2 120003331 . A . PASS END=120003358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 120003359 . A . PASS END=120003417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:33:0,85,1119:0,85,255:38,0 chr2 120003418 . A . PASS END=120003418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:32,0 chr2 120003419 . A . PASS END=120003452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1205:0,83,255:34,0 chr2 120003453 . G . PASS END=120003453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:31,0 chr2 120003454 . T . PASS END=120003482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr2 120003483 . C . PASS END=120003483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 120003484 . C . PASS END=120003485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:28,0 chr2 120003486 . C . PASS END=120003486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:27,0 chr2 120003487 . A . PASS END=120003490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1184:0,83,255:30,0 chr2 120003491 . G . PASS END=120003491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:29,0 chr2 120003492 . C . PASS END=120003492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 120003493 . A . PASS END=120003493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:30,0 chr2 120003494 . C . PASS END=120003494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 120003495 . A . PASS END=120003508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:28:0,63,968:0,63,255:26,0 chr2 120003509 . T . PASS END=120003510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120003511 . A . PASS END=120003511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr2 120003512 . A . PASS END=120003512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120003513 . T . PASS END=120003513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:25,0 chr2 120003514 . G . PASS END=120003516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:27,0 chr2 120003517 . A . PASS END=120003517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 120003518 . T . PASS END=120003518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,942:0,56,255:27,0 chr2 120003519 . C . PASS END=120003525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 120003526 . T . PASS END=120003526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,935:0,48,255:26,0 chr2 120003527 . G . PASS END=120003529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120003530 . C . PASS END=120003535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr2 120003536 . A . PASS END=120003536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:25,0 chr2 120003537 . G . PASS END=120003541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,68,255:26,0 chr2 120003542 . G . PASS END=120003542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:20,0 chr2 120003543 . C . PASS END=120003547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:21,0 chr2 120003548 . G . PASS END=120003552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:47:21:0,47,720:0,47,255:19,0 chr2 120003553 . G . PASS END=120003553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:14,0 chr2 120003554 . G . PASS END=120003554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 120003555 . T . PASS END=120003555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:14,0 chr2 120003556 . A . PASS END=120003560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:14,0 chr2 120003561 . G . PASS END=120003564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:31:16:0,31,495:0,31,255:11,0 chr2 120005255 . G . PASS END=120005259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 120005260 . C . PASS END=120005263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 120005264 . T . PASS END=120005264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 120005265 . G . PASS END=120005291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 120005292 . C . PASS END=120005293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 120005294 . G . PASS END=120005302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 120005303 . A . PASS END=120005303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,435:0,28,255:14,0 chr2 120005304 . T . PASS END=120005326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:18,0 chr2 120005327 . C . PASS END=120005327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 120005328 . C . PASS END=120005328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 120005329 . C . PASS END=120005362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,895:0,62,255:26,0 chr2 120005363 . G . PASS END=120005395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1055:0,84,255:32,0 chr2 120005396 . T . PASS END=120005396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:29,0 chr2 120005397 . G . PASS END=120005465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,89,255:36,0 chr2 120005466 . T . PASS END=120005498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,870:0,72,255:26,0 chr2 120005499 . A . PASS END=120005499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 120005500 . G . PASS END=120005537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,824:0,72,255:25,0 chr2 120005538 . T . PASS END=120005585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 120005586 . T . PASS END=120005586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 120005587 . G . PASS END=120005659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:19,0 chr2 120005660 . C . PASS END=120005662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 120005663 . C . PASS END=120005669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 120005670 . A . PASS END=120005672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 120005673 . A . PASS END=120005745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:19,0 chr2 120005746 . C . PASS END=120005780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 120005781 . A . PASS END=120005781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 120005782 . G . PASS END=120005782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 120012260 . G . PASS END=120012419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:33:0,93,1395:0,99,255:40,0 chr2 120012420 . T . PASS END=120012424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,83,255:26,0 chr2 120015033 . T . PASS END=120015033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 120015034 . G . PASS END=120015038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 120015039 . G . PASS END=120015039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 120015040 . C . PASS END=120015046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:23,0 chr2 120015047 . C . PASS END=120015047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 120015048 . A . PASS END=120015058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,864:0,61,255:26,0 chr2 120015059 . C . PASS END=120015059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 120015060 . A . PASS END=120015060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 120015061 . C . PASS END=120015070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 120015071 . A . PASS END=120015072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 120015073 . C . PASS END=120015085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 120015086 . A . PASS END=120015086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 120015087 . T . PASS END=120015090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120015091 . A . PASS END=120015108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,970:0,67,255:26,0 chr2 120015109 . T . PASS END=120015110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120015111 . C . PASS END=120015111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 120015112 . C . PASS END=120015116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr2 120015117 . C . PASS END=120015117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 120015118 . C . PASS END=120015124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1127:0,93,255:31,0 chr2 120015125 . T . PASS END=120015125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 120015126 . C . PASS END=120015126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 120015127 . A . PASS END=120015132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 120015133 . G . PASS END=120015133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 120015134 . T . PASS END=120015137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 120015138 . C . PASS END=120015140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr2 120015141 . G . PASS END=120015146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 120015147 . C . PASS END=120015163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr2 120015164 . A G, 49.45 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=3.733;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,12,0:0.444,0.000:27:7,7,0:8,5,0:48:84,0,50,429,479,908:255,0,255:13,0:4.9451e+01,7.0928e-05,5.3000e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,7,1,11:6,9,4,8 chr2 120015165 . C . PASS END=120015172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:23,0 chr2 120015173 . T . PASS END=120015188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:20:0,45,675:0,59,255:18,0 chr2 120015189 . G . PASS END=120015190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,40,255:13,0 chr2 120015191 . T . PASS END=120015195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,621:0,40,255:14,0 chr2 120015196 . A . PASS END=120015196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 120015197 . A . PASS END=120015198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 120015199 . A . PASS END=120015201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 120015202 . A . PASS END=120015214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 120015215 . A . PASS END=120015221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:13:0,24,360:0,39,255:8,0 chr2 120020633 . T . PASS END=120020671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:26,0 chr2 120020672 . C . PASS END=120020673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120020674 . C . PASS END=120020679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 120020680 . C . PASS END=120020702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 120020703 . T . PASS END=120020715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 120020716 . C . PASS END=120020727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr2 120020728 . C . PASS END=120020739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 120020740 . C . PASS END=120020748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 120020749 . C . PASS END=120020752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 120020753 . C . PASS END=120020753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 120020754 . T . PASS END=120020755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 120020756 . C . PASS END=120020765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1031:0,84,255:28,0 chr2 120020766 . G . PASS END=120020789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,986:0,68,255:26,0 chr2 120020790 . T . PASS END=120020790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr2 120020791 . G . PASS END=120020823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,64,255:26,0 chr2 120020824 . C . PASS END=120020825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 120020826 . G . PASS END=120020830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 120020831 . C . PASS END=120020861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,523:0,48,255:17,0 chr2 120020862 . A . PASS END=120020862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 120020863 . G . PASS END=120020863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 120020864 . T . PASS END=120020864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,476:0,34,255:16,0 chr2 120020865 . T . PASS END=120020875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr2 120020876 . A . PASS END=120020876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 120020877 . C . PASS END=120020884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 120020885 . G . PASS END=120020907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 120020908 . C . PASS END=120020914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:11:0,24,360:0,33,255:9,0 chr2 120060048 . T . PASS END=120060124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:71:0,120,1800:0,203,255:40,0 chr2 120068962 . C . PASS END=120069060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,169,255:40,0 chr2 120069198 . C . PASS END=120069230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,148,255:40,0 chr2 120069231 . T . PASS END=120069278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:50:0,81,1618:0,81,255:40,0 chr2 120069279 . T . PASS END=120069279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1666:0,78,255:34,0 chr2 120075042 . C . PASS END=120075079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:95:0,120,1800:0,254,255:40,0 chr2 120078730 . C . PASS END=120078780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:98:0,120,1800:0,245,255:40,0 chr2 120097403 . C . PASS END=120097403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1388:0,111,255:37,0 chr2 120097404 . T . PASS END=120097404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:36,0 chr2 120097405 . T . PASS END=120097407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1390:0,111,255:37,0 chr2 120097408 . T . PASS END=120097408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 120097409 . T . PASS END=120097413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1335:0,97,255:37,0 chr2 120097414 . A . PASS END=120097414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:36,0 chr2 120097415 . A . PASS END=120097547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:37:0,93,1388:0,93,255:40,0 chr2 120124012 . C . PASS END=120124026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr2 120124027 . A . PASS END=120124027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr2 120124028 . G . PASS END=120124069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:25,0 chr2 120124070 . A . PASS END=120124070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 120124071 . C . PASS END=120124071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 120124072 . C . PASS END=120124072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 120124073 . A . PASS END=120124079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 120124080 . T . PASS END=120124086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 120124628 . A . PASS END=120124666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:37:0,100,1575:0,100,255:40,0 chr2 120124860 . A . PASS END=120124874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:17,0 chr2 120124875 . C . PASS END=120124875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 120124876 . T . PASS END=120124882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 120124883 . C . PASS END=120124883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 120124884 . G . PASS END=120124902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,698:0,54,255:19,0 chr2 120124903 . A . PASS END=120124905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 120124906 . G . PASS END=120124906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 120124907 . T . PASS END=120124910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 120124913 . A . PASS END=120124920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,724:0,66,255:22,0 chr2 120124921 . A . PASS END=120124922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr2 120124923 . G . PASS END=120124940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,834:0,66,255:26,0 chr2 120124941 . G . PASS END=120124959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 120124960 . C . PASS END=120124961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 120124962 . C . PASS END=120124970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120124971 . T . PASS END=120124982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 120124983 . G . PASS END=120124983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120124984 . G . PASS END=120124990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr2 120124991 . C . PASS END=120124991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 120124992 . G . PASS END=120125000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 120125001 . G . PASS END=120125001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 120125002 . A . PASS END=120125013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120125014 . A . PASS END=120125028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,992:0,65,255:25,0 chr2 120125029 . A G, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,13,0:0,11,0:69:157,72,0,931,72,931:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,13:0,0,10,14 chr2 120125030 . G . PASS END=120125042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 120125043 . A . PASS END=120125046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,853:0,56,255:19,0 chr2 120125047 . G . PASS END=120125056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 120125057 . G . PASS END=120125057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 120125058 . C . PASS END=120125066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:25,0 chr2 120125067 . C . PASS END=120125086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,864:0,61,255:26,0 chr2 120125087 . A . PASS END=120125094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 120125095 . C . PASS END=120125104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 120125161 . A . PASS END=120125179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 120125180 . T . PASS END=120125180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 120125181 . C . PASS END=120125189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr2 120125190 . T . PASS END=120125191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 120125192 . C . PASS END=120125197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 120125198 . C . PASS END=120125199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr2 120125200 . A . PASS END=120125203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 120125204 . C . PASS END=120125210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:51:24:0,51,765:0,55,255:20,0 chr2 120125211 . T . PASS END=120125212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 120125213 . G . PASS END=120125213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 120125214 . G . PASS END=120125214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 120125215 . A . PASS END=120125215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:19,0 chr2 120125216 . C . PASS END=120125216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 120125217 . A . PASS END=120125217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr2 120125218 . G . PASS END=120125220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 120125496 . A . PASS END=120125507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:43:0,113,1388:0,113,255:40,0 chr2 120125764 . G . PASS END=120125881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,102,1530:0,121,255:40,0 chr2 120128316 . A . PASS END=120128378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,111,1602:0,115,255:40,0 chr2 120129821 . G . PASS END=120129894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:73:0,120,1800:0,161,255:40,0 chr2 120187503 . A . PASS END=120187559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:38:0,87,1388:0,87,255:40,0 chr2 120187942 . A . PASS END=120187945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1286:0,92,255:35,0 chr2 120187946 . T . PASS END=120187946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:34,0 chr2 120187947 . G . PASS END=120187979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:35:0,91,1243:0,91,255:39,0 chr2 120189480 . A . PASS END=120189500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 120194465 . G . PASS END=120194526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1180:0,83,255:35,0 chr2 120194527 . C . PASS END=120194527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1052:0,71,255:31,0 chr2 120194528 . C . PASS END=120194549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1235:0,88,255:33,0 chr2 120194550 . T . PASS END=120194550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr2 120194551 . G . PASS END=120194567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:31,0 chr2 120194568 . C . PASS END=120194569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 120194570 . G . PASS END=120194570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 120194571 . T . PASS END=120194571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1101:0,65,255:27,0 chr2 120194572 . C . PASS END=120194576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 120194577 . T . PASS END=120194577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,896:0,73,255:26,0 chr2 120194578 . T . PASS END=120194600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1147:0,89,255:33,0 chr2 120194601 . C . PASS END=120194610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:42:32:0,42,630:0,64,255:19,0 chr2 120194611 . C . PASS END=120194617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:33:31:0,33,495:0,93,255:13,0 chr2 120194618 . G . PASS END=120194629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:21:30:0,21,315:0,90,255:9,0 chr2 120194630 . T . PASS END=120194640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:15:30:0,15,225:0,54,255:6,0 chr2 120194641 . C . PASS END=120194650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:3:30:0,3,45:0,13,255:2,0 chr2 120194651 . A AGTGTGC, 137.30 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,14,0:0,16,0:87:169,90,0,1309,90,1309:255,0,104:0,30:1.3730e+02,8.7297e+01,0.0000e+00,4.5000e+02,1.2207e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,12,18:0,0,16,14 chr2 120194652 . C . LowGQ END=120194653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,28:30:0:27:0,0,0:0,4,0:24,0 chr2 120194654 . A . PASS END=120194654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr2 120194655 . T . PASS END=120194655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 120194656 . C . PASS END=120194660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr2 120194661 . T . PASS END=120194674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 120194675 . C . PASS END=120194676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr2 120194677 . G . PASS END=120194698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,62,255:22,0 chr2 120194699 . G . PASS END=120194702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 120194703 . G . PASS END=120194703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 120194704 . C . PASS END=120194707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 120194708 . G . PASS END=120194710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr2 120194711 . C . PASS END=120194711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 120194712 . T . PASS END=120194717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 120194718 . G . PASS END=120194718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:23,0 chr2 120194719 . C . PASS END=120194727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr2 120194728 . C . PASS END=120194728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:20,0 chr2 120194729 . G . PASS END=120194766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,825:0,69,255:26,0 chr2 120194767 . C . PASS END=120194768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120194769 . T . PASS END=120194773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 120194774 . G . PASS END=120194779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120194780 . C . PASS END=120194780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 120194781 . A . PASS END=120194791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 120194792 . G . PASS END=120194792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 120194793 . A . PASS END=120194801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 120194802 . C . PASS END=120194806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:29:0,78,1170:0,87,255:26,0 chr2 120194807 . T . PASS END=120194990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,950:0,81,255:40,0 chr2 120194991 . A . PASS END=120194996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:36:0,72,1080:0,84,255:26,0 chr2 120194997 . T . PASS END=120195016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:47:18:0,47,720:0,47,255:19,0 chr2 120197693 . T . PASS END=120197704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 120197705 . G . PASS END=120197707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 120197708 . C . PASS END=120197722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:13,0 chr2 120197723 . G . PASS END=120197777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr2 120197778 . A . PASS END=120197781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 120197782 . G . PASS END=120197784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 120197785 . A . PASS END=120197785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 120197786 . C . PASS END=120197805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 120197806 . G . PASS END=120197806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:14,0 chr2 120197807 . C . PASS END=120197833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,576:0,48,255:17,0 chr2 120199134 . C . PASS END=120199139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 120199140 . A G, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,9,0:0,13,0:63:151,66,0,853,66,853:255,66,0:0,0:1.1321e+02,6.3214e+01,2.0709e-06,4.5000e+02,9.7984e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,11:0,0,14,8 chr2 120199141 . T . PASS END=120199151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:24,0 chr2 120199152 . G . PASS END=120199152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:23,0 chr2 120199153 . T . PASS END=120199158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr2 120199159 . A . PASS END=120199159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 120199160 . C . PASS END=120199161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 120199162 . G . PASS END=120199162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 120199163 . C . PASS END=120199164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 120199165 . A . PASS END=120199165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,855:0,44,255:21,0 chr2 120199166 . C . PASS END=120199175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,976:0,65,255:25,0 chr2 120204335 . C . PASS END=120204380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1320:0,99,255:37,0 chr2 120204381 . G . PASS END=120204381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr2 120204382 . C . PASS END=120204436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1202:0,86,255:36,0 chr2 120204437 . C . PASS END=120204461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,990:0,60,255:26,0 chr2 120206265 . T . PASS END=120206356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:68:0,120,1800:0,157,255:40,0 chr2 120209586 . C . PASS END=120209651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,120,1800:0,122,255:40,0 chr2 120209652 . G . PASS END=120209670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,165,255:40,0 chr2 120210863 . C . PASS END=120210923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,112,1713:0,112,255:40,0 chr2 120219423 . C . PASS END=120219571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,90,255:40,0 chr2 120219572 . C . PASS END=120219576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr2 120221699 . C . PASS END=120221700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:35:0,98,1335:0,98,255:35,0 chr2 120221701 . T . PASS END=120221701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:33,0 chr2 120221702 . G . PASS END=120221712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1271:0,89,255:36,0 chr2 120221713 . A . PASS END=120221713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr2 120221714 . G . PASS END=120221831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:96:39:0,96,1404:0,101,255:40,0 chr2 120223365 . C . PASS END=120223462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:33:0,86,1202:0,86,255:40,0 chr2 120231029 . C . PASS END=120231035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:35,0 chr2 120231036 . T . PASS END=120231051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:37:0,87,1349:0,87,255:38,0 chr2 120231052 . T . PASS END=120231052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1039:0,66,255:35,0 chr2 120231053 . C . PASS END=120231053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,102,1113:0,102,255:38,0 chr2 120231054 . A . PASS END=120231054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1184:0,64,255:38,0 chr2 120231055 . C . PASS END=120231056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,103,1269:0,103,255:39,0 chr2 120231057 . T . PASS END=120231057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:6:40:0,6,890:0,6,255:33,0 chr2 120231058 . T . PASS END=120231060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,104,1496:0,104,255:39,0 chr2 120231061 . C . PASS END=120231061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1100:0,70,255:35,0 chr2 120231062 . G . PASS END=120231072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:84:40:0,84,1112:0,86,255:38,0 chr2 120231073 . G . PASS END=120231073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1315:0,79,255:31,0 chr2 120231074 . A . PASS END=120231076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:43:0,96,1440:0,129,255:33,0 chr2 120231077 . A . PASS END=120231077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:55:40:0,55,1094:0,55,255:30,0 chr2 120231078 . G . PASS END=120231086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:34:0,83,1155:0,83,255:33,0 chr2 120231087 . A . PASS END=120231087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1099:0,66,255:33,0 chr2 120231088 . A . PASS END=120231093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1069:0,85,255:32,0 chr2 120231094 . C . PASS END=120231094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,959:0,19,255:27,0 chr2 120231095 . T . PASS END=120231095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1202:0,86,255:32,0 chr2 120231096 . G . PASS END=120231096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:30,0 chr2 120231097 . A . PASS END=120231101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1135:0,85,255:30,0 chr2 120231102 . C . PASS END=120231127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:24:0,64,864:0,64,255:26,0 chr2 120231128 . G . PASS END=120231132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 120236387 . C . PASS END=120236396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 120236397 . G . PASS END=120236399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 120236400 . G . PASS END=120236400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 120236401 . A . PASS END=120236473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1023:0,81,255:39,0 chr2 120236474 . T . PASS END=120236474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:28,0 chr2 120236475 . G . PASS END=120236482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1208:0,83,255:29,0 chr2 120236483 . T . PASS END=120236494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:26,0 chr2 120252004 . C . PASS END=120252009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 120252010 . C . PASS END=120252013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 120252014 . C . PASS END=120252014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:26,0 chr2 120252015 . T . PASS END=120252015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 120252016 . G . PASS END=120252016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 120252017 . C . PASS END=120252021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr2 120252022 . T . PASS END=120252022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 120252023 . G . PASS END=120252025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 120252026 . C . PASS END=120252026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 120252027 . A . PASS END=120252041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1035:0,87,255:32,0 chr2 120252042 . T . PASS END=120252042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 120252043 . C . PASS END=120252052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:33,0 chr2 120252053 . T . PASS END=120252053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:31,0 chr2 120252054 . T . PASS END=120252104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,86,255:35,0 chr2 120252105 . A . PASS END=120252118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,953:0,65,255:26,0 chr2 120252119 . T . PASS END=120252119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,884:0,26,255:22,0 chr2 120252120 . C . PASS END=120252124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,886:0,61,255:24,0 chr2 120253050 . C . PASS END=120253113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,114,1710:0,129,255:40,0 chr2 120281731 . C . PASS END=120281732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 120281733 . A . LowGQ END=120281733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:9,0 chr2 120281734 . G . PASS END=120281734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 120281735 . T . PASS END=120281762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,349:0,30,255:13,0 chr2 120281763 . G . PASS END=120281770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 120281771 . T . PASS END=120281781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 120281782 . C . PASS END=120281790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 120281791 . G . PASS END=120281802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 120303708 . A . PASS END=120303782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:97:38:0,97,1351:0,97,255:40,0 chr2 120303783 . T . PASS END=120303819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:70:0,120,1800:0,170,255:40,1 chr2 120303820 . A T, 50.00 PASS DP=72;MQ=250.00;MQRankSum=7.290;ReadPosRankSum=3.707;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,37,0:0.514,0.000:72:19,20,0:16,17,0:48:85,0,50,1235,1220,2455:255,0,255:34,0:5.0000e+01,6.5233e-05,5.2969e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,19,10,27:20,15,15,22 chr2 120303821 . A . PASS END=120303846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,174,255:40,0 chr2 120306661 . A . PASS END=120306761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:53:0,120,1800:0,133,255:40,0 chr2 120313613 . T . PASS END=120313631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:13,0 chr2 120313632 . G . PASS END=120313643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:16,0 chr2 120313644 . C . PASS END=120313644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 120313645 . C . PASS END=120313659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 120313660 . A . PASS END=120313660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 120313661 . C . PASS END=120313679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:17,0 chr2 120313680 . C . PASS END=120313680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 120313681 . C . PASS END=120313683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 120313684 . G . PASS END=120313684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 120313685 . C . PASS END=120313714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,613:0,40,255:18,0 chr2 120313715 . T . PASS END=120313715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 120313716 . T . PASS END=120313735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,591:0,51,255:18,0 chr2 120313736 . G . PASS END=120313736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 120313737 . A . PASS END=120313741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:17,0 chr2 120313742 . A . PASS END=120313742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 120313743 . G . PASS END=120313749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 120313750 . G . PASS END=120313754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 120313755 . C . PASS END=120313763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,519:0,42,255:14,0 chr2 120313764 . C . PASS END=120313776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 120313777 . A . PASS END=120313777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr2 120314584 . G . PASS END=120314616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1324:0,106,255:40,0 chr2 120317265 . C . PASS END=120317351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,145,255:40,0 chr2 120317504 . G . PASS END=120317571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:91:46:0,91,1462:0,91,255:40,0 chr2 120317572 . C . PASS END=120317581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,105,1461:0,105,255:39,0 chr2 120317582 . T . PASS END=120317582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:62:43:0,62,1252:0,62,255:35,0 chr2 120317583 . G . PASS END=120317593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:41:0,87,1305:0,106,255:33,0 chr2 120317594 . C . PASS END=120317595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:60:40:0,60,900:0,104,255:20,0 chr2 120317596 . C . PASS END=120317602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:45:37:0,45,675:0,87,255:19,0 chr2 120319590 . G . PASS END=120319690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:37:0,97,1360:0,97,255:40,0 chr2 120330115 . T . PASS END=120330151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:74:0,120,1800:0,183,255:40,0 chr2 120337756 . A . PASS END=120337780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,100,1285:0,100,255:39,0 chr2 120344695 . C . PASS END=120344798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:31:0,90,1297:0,93,255:40,0 chr2 120347181 . G . PASS END=120347185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1157:0,93,255:31,0 chr2 120347186 . A . PASS END=120347186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr2 120347187 . G . PASS END=120347188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1117:0,93,255:31,0 chr2 120347189 . A . PASS END=120347210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1157:0,83,255:32,0 chr2 120347211 . C . PASS END=120347217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:28:0,78,1170:0,84,255:26,0 chr2 120347218 . T . PASS END=120347218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120347219 . T . PASS END=120347219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:25,0 chr2 120347220 . T . PASS END=120347220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120347221 . A . PASS END=120347225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 120347226 . G C, 43.84 PASS DP=29;MQ=250.00;MQRankSum=4.336;ReadPosRankSum=2.042;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,10,0:0.345,0.000:29:9,8,0:10,2,0:43:79,0,50,358,672,1029:255,0,255:16,0:4.3838e+01,2.0114e-04,5.3000e+01,3.5767e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,11,4,6:6,13,2,8 chr2 120347227 . A . PASS END=120347227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 120358794 . G . PASS END=120358953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:81:48:0,81,1215:0,113,255:40,0 chr2 120360194 . C . PASS END=120360212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,161,255:40,0 chr2 120362248 . A . PASS END=120362368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,104,1488:0,104,255:40,0 chr2 120362452 . G . PASS END=120362563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:68:0,120,1800:0,182,255:40,0 chr2 120362757 . T . PASS END=120362859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:51:0,120,1800:0,136,255:40,0 chr2 120362860 . T . PASS END=120362865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 120366078 . G . PASS END=120366100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:53:0,120,1800:0,132,255:40,0 chr2 120366101 . C . PASS END=120366165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,109,1800:0,109,255:40,0 chr2 120369229 . C . PASS END=120369262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,141,255:40,0 chr2 120369263 . T . PASS END=120369299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,165,255:40,0 chr2 120369300 . T C, 208.58 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,28,0:0,26,0:159:246,162,0,346,346,346:255,163,0:0,0:2.0858e+02,1.5858e+02,0.0000e+00,3.4335e+02,3.7812e+02,3.4636e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,25,29:0,0,29,25 chr2 120369301 . G . PASS END=120369318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,121,255:40,0 chr2 120373187 . A . PASS END=120373285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:44:0,112,1681:0,112,255:40,2 chr2 120383159 . G . PASS END=120383332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:65:0,120,1800:0,190,255:40,0 chr2 120385229 . A . PASS END=120385232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1191:0,105,255:36,0 chr2 120385233 . G . PASS END=120385233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 120385234 . A . PASS END=120385237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1310:0,92,255:35,0 chr2 120385238 . T . PASS END=120385238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:34,0 chr2 120385239 . C . PASS END=120385246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:37:0,98,1373:0,98,255:36,0 chr2 120385247 . T . PASS END=120385247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1281:0,75,255:36,0 chr2 120385248 . C . PASS END=120385248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1451:0,114,255:38,0 chr2 120385249 . T . PASS END=120385249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1345:0,78,255:38,0 chr2 120385250 . T . PASS END=120385338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:38:0,96,1440:0,99,255:40,0 chr2 120385339 . C . PASS END=120385352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:28:0,75,1125:0,84,255:26,0 chr2 120385353 . C . PASS END=120385353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120385354 . A . PASS END=120385362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,939:0,64,255:26,0 chr2 120387451 . G . PASS END=120387531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,144,255:40,0 chr2 120388146 . G . PASS END=120388253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,120,1800:0,128,255:40,0 chr2 120388343 . G . PASS END=120388374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:66:0,120,1800:0,185,255:40,0 chr2 120388375 . A . PASS END=120388411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,194,255:40,0 chr2 120388412 . G A, 290.07 PASS DP=82;MQ=249.36;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,82,0:1.000,0.000:82:0,36,0:0,46,0:240:328,243,0,428,428,428:255,246,0:0,0:2.9007e+02,2.4007e+02,0.0000e+00,4.2484e+02,4.5000e+02,4.2785e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,37,45:0,0,33,49 chr2 120388413 . T . PASS END=120388449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:61:0,120,1800:0,132,255:40,0 chr2 120388450 . T . PASS END=120388477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:40:0,96,1540:0,96,255:40,0 chr2 120393817 . A . PASS END=120393840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,239,255:40,0 chr2 120395706 . A . PASS END=120395707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 120395708 . A . PASS END=120395708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr2 120395709 . A . PASS END=120395714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1170:0,86,255:32,0 chr2 120395835 . A . PASS END=120395993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:33:0,82,1039:0,82,255:40,0 chr2 120397357 . G . PASS END=120397436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:34:0,89,1294:0,89,255:40,0 chr2 120397437 . G . PASS END=120397437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 120397438 . A . PASS END=120397448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1157:0,82,255:33,0 chr2 120404534 . C . PASS END=120404536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,145,255:40,0 chr2 120404537 . C . PASS END=120404537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,6:54:47:54:0,47,1262:0,47,255:36,0 chr2 120404538 . G . PASS END=120404583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:54:0,111,1529:0,111,255:40,0 chr2 120404584 . T . PASS END=120404603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:55:0,90,1350:0,138,255:40,0 chr2 120404604 . G . PASS END=120404606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:63:55:0,63,945:0,148,255:26,0 chr2 120404607 . A . PASS END=120404609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:48:53:0,48,720:0,107,255:17,0 chr2 120404610 . C . PASS END=120404615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:30:54:0,30,450:0,48,255:13,0 chr2 120404616 . A . PASS END=120404617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:24:53:0,24,360:0,159,255:9,0 chr2 120404618 . A . PASS END=120404626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:12:48:0,12,180:0,49,255:6,0 chr2 120406019 . G . PASS END=120406020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 120406021 . G . PASS END=120406021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 120406022 . C . PASS END=120406022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 120406023 . A . PASS END=120406023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:21,0 chr2 120406024 . C . PASS END=120406028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 120406029 . A . PASS END=120406030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 120406031 . C . PASS END=120406037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 120406038 . T . PASS END=120406038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:20,0 chr2 120406039 . G . PASS END=120406044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr2 120406045 . G . PASS END=120406045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 120406046 . T . PASS END=120406048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 120406049 . C . PASS END=120406049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 120406050 . G . PASS END=120406067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 120409550 . T . PASS END=120409578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,170,255:40,0 chr2 120409579 . T . PASS END=120409615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:89:0,120,1800:0,232,255:40,0 chr2 120409616 . G T, 47.88 PASS DP=89;MQ=250.00;MQRankSum=8.033;ReadPosRankSum=6.101;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:51,38,0:0.427,0.000:89:27,23,0:24,15,0:47:83,0,50,1208,1810,3018:255,0,255:40,0:4.7875e+01,9.2673e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,26,24,14:23,28,21,17 chr2 120409617 . T . PASS END=120409645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,201,255:40,0 chr2 120412577 . C . PASS END=120412579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 120412580 . G . PASS END=120412580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:33,0 chr2 120412581 . A . PASS END=120412794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:36:0,101,1295:0,101,255:40,0 chr2 120412795 . G . PASS END=120412814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1215:0,107,255:38,0 chr2 120412815 . G . PASS END=120412831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr2 120412832 . C T, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,15,0:0,10,0:72:160,75,0,961,75,961:255,75,0:0,0:1.2224e+02,7.2240e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,23:0,0,8,17 chr2 120412833 . A . PASS END=120412850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,803:0,61,255:25,0 chr2 120412851 . T . PASS END=120412851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 120412852 . G . PASS END=120412852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 120412853 . A . PASS END=120412853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr2 120413938 . A . PASS END=120414046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:35:0,80,1294:0,80,255:40,0 chr2 120438430 . A . PASS END=120438444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 120438445 . T . PASS END=120438445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 120438446 . G . PASS END=120438454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 120438455 . C . PASS END=120438455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 120438456 . A . PASS END=120438469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr2 120438470 . G . PASS END=120438475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,740:0,63,255:22,0 chr2 120438476 . G . PASS END=120438476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 120438477 . G . PASS END=120438486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,911:0,72,255:26,0 chr2 120438487 . T . PASS END=120438488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 120438489 . G . PASS END=120438489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 120438490 . G . PASS END=120438502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr2 120438503 . C . PASS END=120438506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 120438507 . C . PASS END=120438507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr2 120438508 . C . PASS END=120438514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr2 120438515 . G C, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.318;ReadPosRankSum=4.318;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:11,16,0:0.593,0.000:27:6,9,0:5,7,0:47:85,0,48,572,393,966:255,0,255:12,0:5.0000e+01,7.8176e-05,5.0977e+01,4.5000e+02,4.2812e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,8,8:8,3,7,9:120438515 chr2 120438516 . A . PASS END=120438519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr2 120438520 . C . PASS END=120438520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 120438521 . C . PASS END=120438522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 120438523 . A G, 47.19 PASS DP=28;MQ=250.00;MQRankSum=4.375;ReadPosRankSum=4.375;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:17,11,0:0.393,0.000:28:10,6,0:7,5,0:46:82,0,50,393,592,985:255,0,255:17,0:4.7190e+01,1.0458e-04,5.3000e+01,3.9332e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,6,5:10,7,7,4:120438515 chr2 120438524 . T . PASS END=120438532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 120438533 . A . PASS END=120438533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr2 120438534 . C . PASS END=120438537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 120438538 . T . PASS END=120438538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 120438539 . T . PASS END=120438540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 120438541 . C . PASS END=120438541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 120438542 . C . PASS END=120438551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 120438552 . G . PASS END=120438552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr2 120438553 . G . PASS END=120438558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 120438559 . T . PASS END=120438561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 120438562 . C . PASS END=120438562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 120438563 . T . PASS END=120438569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1054:0,74,255:26,0 chr2 120438570 . G . PASS END=120438580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 120438581 . A . PASS END=120438581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 120438582 . G . PASS END=120438586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 120438587 . A . PASS END=120438593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 120438594 . T . PASS END=120438596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 120438597 . G . PASS END=120438602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1047:0,71,255:26,0 chr2 120438603 . T . PASS END=120438603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:26,0 chr2 120438604 . C . PASS END=120438604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120438605 . C . PASS END=120438606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:26,0 chr2 120438607 . C . PASS END=120438624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1008:0,68,255:26,0 chr2 120438625 . C . PASS END=120438625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,1022:0,32,255:25,0 chr2 120438626 . A . PASS END=120438632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 120438633 . G . PASS END=120438633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120438634 . C . PASS END=120438637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 120438638 . A . PASS END=120438639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:23,2 chr2 120438640 . G . PASS END=120438658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,902:0,71,255:26,0 chr2 120438659 . G . PASS END=120438668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,962:0,78,255:26,0 chr2 120438669 . C . PASS END=120438677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:28,0 chr2 120438678 . C . PASS END=120438678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr2 120438679 . A . PASS END=120438685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 120438686 . T . PASS END=120438695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:25,0 chr2 120438696 . A G, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,14,0:0,14,0:81:169,84,0,1086,84,1086:255,84,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,15:0,0,15,13 chr2 120438697 . C . PASS END=120438713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:27,0 chr2 120438714 . C . PASS END=120438715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 120438716 . C . PASS END=120438716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:27,0 chr2 120438717 . A . PASS END=120438729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:30,0 chr2 120438730 . G . PASS END=120438732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 120438733 . G . PASS END=120438733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 120438734 . C . PASS END=120438741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 120438742 . G . PASS END=120438742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 120438743 . G . PASS END=120438744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 120438745 . A . PASS END=120438745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 120438746 . T . PASS END=120438747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120438748 . C . PASS END=120438766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:24:0,62,856:0,62,255:26,0 chr2 120438767 . A . PASS END=120438767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr2 120438768 . C . PASS END=120438771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 120438772 . G . PASS END=120438773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 120438774 . G . PASS END=120438775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 120438776 . T . PASS END=120438777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 120438778 . A . PASS END=120438788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:25,0 chr2 120438789 . T . PASS END=120438789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 120438790 . C . PASS END=120438790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 120438791 . C . PASS END=120438791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 120438792 . C . PASS END=120438793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr2 120438794 . T . PASS END=120438796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 120438797 . T . PASS END=120438797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 120438798 . C . PASS END=120438798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 120438799 . A . PASS END=120438804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,898:0,62,255:24,0 chr2 120438805 . G . PASS END=120438805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 120438806 . G . PASS END=120438810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:26,0 chr2 120438811 . A . PASS END=120438811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,780:0,28,255:21,0 chr2 120438812 . C . PASS END=120438815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:24,0 chr2 120438816 . G . PASS END=120438816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:22,0 chr2 120438817 . G . PASS END=120438819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:23,0 chr2 120438820 . T . PASS END=120438820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 120438821 . G . PASS END=120438821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 120438822 . G . PASS END=120438822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 120438823 . C . PASS END=120438823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 120438824 . G . PASS END=120438824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 120438825 . G . PASS END=120438832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:22,0 chr2 120438833 . C . PASS END=120438833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 120438834 . A . PASS END=120438834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 120438835 . G . PASS END=120438835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 120438836 . G . PASS END=120438839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,808:0,66,255:22,0 chr2 120438840 . C . PASS END=120438841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 120438842 . G . PASS END=120438849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 120438850 . G . PASS END=120438913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,576:0,48,255:18,0 chr2 120438914 . A . PASS END=120438914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr2 120438915 . A . PASS END=120438917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 120438918 . C . PASS END=120438924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,535:0,31,255:13,0 chr2 120438925 . A . PASS END=120438925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:11,0 chr2 120438926 . C . PASS END=120438939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 120438940 . C . PASS END=120438956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:14,0 chr2 120438957 . C . PASS END=120438957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 120438958 . C . PASS END=120438958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 120438959 . T . PASS END=120438959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 120438960 . G . PASS END=120438963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 120438964 . G . PASS END=120438967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,565:0,32,255:14,0 chr2 120438968 . C . PASS END=120438973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 120438974 . C . PASS END=120438974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 120438975 . A . PASS END=120438975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 120438976 . C . PASS END=120438980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 120438981 . C . PASS END=120438981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 120438982 . G . PASS END=120438987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 120438988 . G . PASS END=120439019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,468:0,42,255:16,0 chr2 120439020 . C . PASS END=120439021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 120439022 . T . PASS END=120439023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 120439024 . A . PASS END=120439025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,566:0,34,255:16,0 chr2 120439026 . T . PASS END=120439040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:19,0 chr2 120439041 . C . PASS END=120439048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 120439049 . T . PASS END=120439049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 120439050 . G . PASS END=120439066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 120439067 . T . PASS END=120439067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 120439068 . T . PASS END=120439086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,900:0,69,255:26,0 chr2 120439087 . C . PASS END=120439087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 120439088 . A . PASS END=120439124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:24,0 chr2 120439125 . C . PASS END=120439134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 120439135 . G . PASS END=120439151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,67,255:25,0 chr2 120439152 . C . PASS END=120439158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120439159 . T . PASS END=120439162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 120439163 . G . PASS END=120439163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120439164 . T . PASS END=120439164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 120439165 . G . PASS END=120439166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 120439167 . A . PASS END=120439168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:29:0,52,945:0,52,255:28,0 chr2 120439169 . T . PASS END=120439186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1157:0,90,255:31,0 chr2 120439187 . T . PASS END=120439187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 120439188 . T . PASS END=120439190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 120439191 . G . PASS END=120439192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 120439193 . C . PASS END=120439198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 120439199 . A . PASS END=120439199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 120439200 . C . PASS END=120439200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 120439201 . C . PASS END=120439201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120439202 . T . PASS END=120439202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 120439203 . G . PASS END=120439205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 120439206 . C . PASS END=120439215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,903:0,67,255:26,0 chr2 120439216 . C . PASS END=120439228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 120439229 . A . PASS END=120439229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 120439230 . C G, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=1.439;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,17,0:0.586,0.000:29:6,7,0:6,10,0:48:85,0,48,608,429,1037:255,0,255:12,0:5.0000e+01,7.6882e-05,5.1120e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,10,7:4,8,8,9 chr2 120439231 . G . PASS END=120439233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120439234 . G . PASS END=120439241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 120439242 . G . PASS END=120439267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1250:0,91,255:38,0 chr2 120439268 . C . PASS END=120439317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:38:0,82,1350:0,82,255:40,0 chr2 120439318 . T . PASS END=120439320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1327:0,62,255:35,0 chr2 120439321 . G . PASS END=120439322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:40:0,90,1435:0,90,255:35,0 chr2 120439323 . G . PASS END=120439324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1335:0,62,255:34,0 chr2 120439325 . T . PASS END=120439325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:34,0 chr2 120439326 . G . PASS END=120439326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1266:0,37,255:34,0 chr2 120439327 . C . PASS END=120439328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1319:0,72,255:34,0 chr2 120439329 . G . PASS END=120439329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1271:0,56,255:32,0 chr2 120439330 . A . PASS END=120439332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1234:0,69,255:33,0 chr2 120439333 . T . PASS END=120439333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 120439334 . G . PASS END=120439334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 120439335 . G . PASS END=120439335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 120439336 . A . PASS END=120439336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 120439337 . G . PASS END=120439354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:33,0 chr2 120439355 . G . PASS END=120439355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 120439356 . C . PASS END=120439365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:30,0 chr2 120443234 . G . PASS END=120443290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:62:0,120,1800:0,182,255:40,0 chr2 120567430 . A . PASS END=120567434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,190,255:40,0 chr2 120567435 . C . PASS END=120567567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:93:38:0,93,1395:0,98,255:40,0 chr2 120620112 . A . PASS END=120620138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:76:0,120,1800:0,196,255:40,0 chr2 120620139 . G . PASS END=120620219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:71:0,120,1800:0,136,255:40,0 chr2 120634878 . T . PASS END=120634941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,183,255:40,0 chr2 120635019 . A . PASS END=120635118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:72:0,120,1800:0,210,255:40,0 chr2 120639362 . G . PASS END=120639406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:95:0,120,1800:0,244,255:40,0 chr2 120639673 . A . PASS END=120639725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:88:0,120,1800:0,225,255:40,0 chr2 120640079 . C . PASS END=120640199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,117,1629:0,117,255:40,0 chr2 120643371 . A . PASS END=120643458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,138,255:40,0 chr2 120658294 . G . PASS END=120658382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,131,255:40,0 chr2 120672755 . G . PASS END=120672861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:83:0,120,1800:0,212,255:40,0 chr2 120677645 . C . PASS END=120677817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,101,1749:0,101,255:40,0 chr2 120684174 . T . PASS END=120684242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:55:0,120,1800:0,146,255:40,0 chr2 120690000 . A . PASS END=120690125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,1052:0,82,255:40,0 chr2 120692376 . T . PASS END=120692530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:30:0,80,1163:0,80,255:40,0 chr2 120692531 . C . PASS END=120692534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:29:0,77,1092:0,77,255:26,0 chr2 120702657 . A . PASS END=120702660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1230:0,72,255:37,0 chr2 120702661 . C . PASS END=120702664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:93:41:0,93,1490:0,93,255:40,0 chr2 120702665 . A . PASS END=120702665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1341:0,73,255:38,0 chr2 120702666 . G . PASS END=120702813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:42:0,87,1460:0,87,255:40,0 chr2 120702814 . A . PASS END=120702816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr2 120703917 . C . PASS END=120704000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:51:0,120,1800:0,153,255:40,0 chr2 120704094 . G . PASS END=120704119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,182,255:40,0 chr2 120704120 . G . PASS END=120704146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:46:0,81,1215:0,110,255:40,0 chr2 120704147 . A . PASS END=120704152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:66:45:0,66,990:0,135,255:25,0 chr2 120704153 . G . PASS END=120704163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:45:40:0,45,675:0,46,255:19,1 chr2 120704164 . A AT, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=0.759;FractionInformativeReads=0.950;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,19,0:0.500,0.000:38:12,8,0:7,11,0:47:80,0,47,180,180,180:255,0,255:16,24:5.0000e+01,8.8531e-05,4.9827e+01,1.8477e+02,2.1477e+02,1.8778e+02:0.00,30.00,33.01,34.77,64.77,37.78:4,15,7,12:11,8,8,11:120704164 chr2 120704165 . T . LowGQ END=120704165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,16:40:0:40:0,0,310:255,0,255:35,0 chr2 120704166 . G T, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=0.632;FractionInformativeReads=0.975;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:19,20,0:0.513,0.000:39:12,8,0:7,12,0:47:85,0,47,185,185,185:255,0,255:16,0:5.0000e+01,8.8531e-05,4.9827e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,15,7,13:11,8,9,11:120704164 chr2 120704167 . T . PASS END=120704190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,99,255:36,0 chr2 120704191 . A . PASS END=120704192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 120704193 . T . PASS END=120704197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 120709549 . G . PASS END=120709705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:34:0,86,1202:0,86,255:40,0 chr2 120712733 . C . PASS END=120712761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,120,1800:0,122,255:40,0 chr2 120712762 . G . PASS END=120712880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:45:0,93,1395:0,118,255:40,0 chr2 120712881 . A . PASS END=120712884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:72:43:0,72,1080:0,129,255:26,0 chr2 120712885 . C . PASS END=120712890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:40:0,84,1260:0,120,255:29,0 chr2 120712891 . C . PASS END=120712899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,86,255:24,0 chr2 120714420 . C . PASS END=120714447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:47:0,80,1454:0,80,255:40,0 chr2 120714448 . C . PASS END=120714510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:62:0,120,1800:0,153,255:40,0 chr2 120714592 . A . PASS END=120714653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:55:0,120,1800:0,153,255:40,0 chr2 120718383 . A . PASS END=120718529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:38:0,87,1239:0,87,255:40,0 chr2 120720192 . G . PASS END=120720320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:31:0,87,1172:0,93,255:40,0 chr2 120723073 . A . PASS END=120723088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:40:14:0,40,482:0,40,255:19,0 chr2 120723089 . C . PASS END=120723098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 120723099 . G . PASS END=120723099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 120723100 . A . PASS END=120723104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr2 120723105 . G . PASS END=120723168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1266:0,87,255:40,0 chr2 120723169 . C . PASS END=120723169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1457:0,79,255:40,0 chr2 120723170 . A . PASS END=120723203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:39:0,86,1344:0,86,255:40,0 chr2 120723204 . C . PASS END=120723204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr2 120723205 . G . PASS END=120723221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1350:0,98,255:34,0 chr2 120725413 . T . PASS END=120725548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,111,1665:0,122,255:40,0 chr2 120734533 . T . PASS END=120734646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:67:0,120,1800:0,166,255:40,0 chr2 120776661 . A . PASS END=120776661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,496:0,18,255:14,0 chr2 120776662 . T . PASS END=120776662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 120776663 . G . PASS END=120776663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 120776664 . C . PASS END=120776664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr2 120776665 . T . PASS END=120776666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 120776667 . A . PASS END=120776667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,559:0,10,255:17,0 chr2 120776668 . G . PASS END=120776676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,654:0,43,255:19,0 chr2 120776677 . G . PASS END=120776677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:18,0 chr2 120776678 . T . PASS END=120776678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 120776679 . A . PASS END=120776679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 120776680 . G . PASS END=120776680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,619:0,35,255:21,0 chr2 120776681 . A . PASS END=120776681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 120776682 . A . PASS END=120776682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 120776683 . C . PASS END=120776683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 120776684 . A . PASS END=120776684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 120776685 . C . PASS END=120776685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:26,0 chr2 120776686 . T . PASS END=120776686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 120776687 . A . PASS END=120776687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,889:0,34,255:25,0 chr2 120776688 . G . PASS END=120776690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1013:0,84,255:30,0 chr2 120776691 . C . PASS END=120776691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,890:0,26,255:27,0 chr2 120776692 . G . PASS END=120776692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:30,0 chr2 120776693 . T . PASS END=120776693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,927:0,59,255:29,0 chr2 120776694 . C . PASS END=120776694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 120776695 . G . PASS END=120776709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:33:0,82,977:0,82,255:38,0 chr2 120776710 . A . PASS END=120776710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1254:0,64,255:36,0 chr2 120776711 . T . PASS END=120776716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1268:0,87,255:38,0 chr2 120776717 . G . PASS END=120776717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:39:40:0,39,1160:0,39,255:35,0 chr2 120776718 . A . PASS END=120776718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1187:0,72,255:37,0 chr2 120776719 . A . PASS END=120776821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1215:0,82,255:40,0 chr2 120776822 . T . PASS END=120776840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,70,255:26,0 chr2 120799582 . A . PASS END=120799686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:39:0,101,1388:0,101,255:40,0 chr2 120830754 . C . PASS END=120830777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,161,255:40,0 chr2 120830778 . A . PASS END=120830796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,171,255:40,0 chr2 120831676 . T . PASS END=120831681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,111,1554:0,111,255:40,0 chr2 120831682 . C . PASS END=120831682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:64:50:0,64,1637:0,64,255:40,0 chr2 120831683 . A . PASS END=120831700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:54:0,115,1800:0,115,255:40,0 chr2 120831701 . T . PASS END=120831754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,108,1800:0,108,255:40,0 chr2 120833052 . G . PASS END=120833061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,4:88:99:87:0,120,1800:0,178,255:40,0 chr2 120833062 . G . PASS END=120833062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,12:89:39:89:0,39,2399:0,39,255:40,0 chr2 120833063 . T . PASS END=120833096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:78:0,116,1800:0,116,255:40,0 chr2 120833277 . A . PASS END=120833329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,191,255:40,0 chr2 120834547 . C . PASS END=120834554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:30,0 chr2 120834555 . G . PASS END=120834555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 120834556 . G . PASS END=120834667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:31:0,90,1063:0,90,255:40,0 chr2 120834805 . A . PASS END=120834892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,118,1800:0,118,255:40,0 chr2 120836069 . G . PASS END=120836157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:50:0,120,1800:0,136,255:40,1 chr2 120844747 . G . PASS END=120844816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:97:0,120,1800:0,255,255:40,0 chr2 120847923 . G . PASS END=120847928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,770:0,72,255:26,0 chr2 120847929 . G . PASS END=120847929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 120847930 . A . PASS END=120847937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,74,255:26,0 chr2 120847938 . C . PASS END=120848092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:30:0,80,1131:0,80,255:40,0 chr2 120849131 . T . PASS END=120849237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:55:0,120,1800:0,159,255:40,0 chr2 120850825 . C . PASS END=120850852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:70:0,120,1800:0,193,255:40,0 chr2 120857820 . T . PASS END=120857862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,189,255:40,0 chr2 120858275 . G . PASS END=120858363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1215:0,93,255:40,0 chr2 120858364 . T . PASS END=120858387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,839:0,62,255:26,0 chr2 120858388 . A . PASS END=120858388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:19,0 chr2 120858389 . T . PASS END=120858390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 120861636 . G . PASS END=120861658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:19,0 chr2 120861659 . G . PASS END=120861664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:20,0 chr2 120861665 . G . PASS END=120861665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 120861666 . T . PASS END=120861666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 120861667 . G . PASS END=120861667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 120861668 . G . PASS END=120861674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 120861675 . C . PASS END=120861678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:21:0,53,810:0,53,255:19,0 chr2 120861679 . T . PASS END=120861690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 120861691 . G . PASS END=120861691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 120861692 . C . PASS END=120861692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 120861693 . C . PASS END=120861693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 120861694 . T . PASS END=120861701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr2 120861702 . A . PASS END=120861703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 120861704 . C . PASS END=120861704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 120861705 . C . PASS END=120861705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 120861706 . C . PASS END=120861706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 120861707 . A . PASS END=120861721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1072:0,84,255:31,0 chr2 120861722 . A . PASS END=120861722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 120861723 . C . PASS END=120861750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:92:31:0,92,1142:0,92,255:34,0 chr2 120861751 . G . PASS END=120861751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr2 120861752 . T . PASS END=120861770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1266:0,89,255:34,0 chr2 120861771 . T . PASS END=120861771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:29,0 chr2 120861772 . C . PASS END=120861804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:29:0,80,1126:0,80,255:32,0 chr2 120861805 . A . PASS END=120861816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,70,255:26,0 chr2 120885264 . C . PASS END=120885265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 120885266 . T . PASS END=120885267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 120885268 . C . PASS END=120885272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1266:0,105,255:36,0 chr2 120885273 . G . PASS END=120885309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,113,1376:0,113,255:40,0 chr2 120885310 . G A, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.415;ReadPosRankSum=3.662;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,28,0:0.500,0.000:56:17,15,0:11,13,0:48:85,0,50,993,915,1908:255,0,255:27,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,12,16:15,13,11,17 chr2 120885311 . C . PASS END=120885347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,141,255:40,0 chr2 120885348 . G . PASS END=120885416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:41:0,84,1260:0,107,255:40,0 chr2 120885417 . T . PASS END=120885417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:26,0 chr2 120885418 . G . PASS END=120885427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,94,255:32,0 chr2 120889194 . C . PASS END=120889197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,111,1390:0,111,255:40,0 chr2 120889198 . A T, 50.00 PASS DP=42;MQ=248.91;MQRankSum=5.425;ReadPosRankSum=-0.749;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,23,0:0.561,0.000:41:9,12,0:9,11,0:48:85,0,49,814,599,1413:255,0,255:18,0:5.0000e+01,7.3517e-05,5.1592e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,14,9:9,9,13,10 chr2 120889199 . A . PASS END=120889235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:41:0,120,1800:0,123,255:40,0 chr2 120889236 . A . PASS END=120889291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,152,255:40,0 chr2 120900579 . G . PASS END=120900707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:89:48:0,89,1622:0,89,255:40,0 chr2 120903801 . G . PASS END=120903865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:73:0,120,1800:0,206,255:40,0 chr2 120918457 . T . PASS END=120918547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,107,1519:0,107,255:40,0 chr2 120918548 . A . PASS END=120918550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1451:0,104,255:35,0 chr2 120922412 . G . PASS END=120922486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:40:0,96,1485:0,96,255:40,0 chr2 120925042 . G . PASS END=120925083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,139,255:40,0 chr2 120925432 . T . PASS END=120925583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:84:33:0,84,1260:0,99,255:40,0 chr2 120932417 . C . PASS END=120932483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,125,255:40,0 chr2 120979500 . T . PASS END=120979669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:36:0,80,1205:0,80,255:40,0 chr2 120979670 . T . PASS END=120979670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:26,0 chr2 120979671 . G . PASS END=120979673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 120979674 . C . PASS END=120979942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:32:0,80,1117:0,80,255:40,0 chr2 120979943 . C . PASS END=120979943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:30,0 chr2 120979944 . A . PASS END=120980038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1144:0,84,255:40,0 chr2 120980039 . A . PASS END=120980039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1197:0,67,255:35,0 chr2 120980040 . C . PASS END=120980106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1225:0,89,255:38,0 chr2 120980107 . T . PASS END=120980107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:31,0 chr2 120980108 . T . PASS END=120980117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1331:0,95,255:33,0 chr2 120980118 . C . PASS END=120980118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr2 120980119 . A . PASS END=120980146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:89:35:0,89,1286:0,89,255:37,0 chr2 120980147 . G . PASS END=120980147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr2 120980148 . T . PASS END=120980189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:34:0,92,1288:0,92,255:37,0 chr2 120980190 . G . PASS END=120980190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:32,0 chr2 120980191 . A . PASS END=120980269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:34,0 chr2 120980270 . G . PASS END=120980270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr2 120980271 . C . PASS END=120980289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 120980290 . A . PASS END=120980296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 120980297 . T . PASS END=120980302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr2 120980303 . T . PASS END=120980304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 120980305 . G . PASS END=120980315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 120980316 . C . PASS END=120980346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,886:0,61,255:26,0 chr2 120980347 . G . PASS END=120980347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:22,0 chr2 120980348 . G . PASS END=120980390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,889:0,72,255:26,0 chr2 120980391 . G . PASS END=120980394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 120980395 . A . PASS END=120980395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,820:0,42,255:22,0 chr2 120980396 . G . PASS END=120980399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 120980400 . C . PASS END=120980400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 120980401 . T . PASS END=120980404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 120980405 . A . PASS END=120980405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 120980406 . C . PASS END=120980415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,930:0,62,255:24,0 chr2 120980416 . G . PASS END=120980416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:22,0 chr2 120980417 . G . PASS END=120980426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,71,255:26,0 chr2 120980427 . G . PASS END=120980427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120980428 . G C, 49.86 PASS DP=29;MQ=248.44;MQRankSum=3.906;ReadPosRankSum=2.640;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:6,8,0:9,6,0:47:85,0,47,185,185,185:255,0,255:14,0:4.9859e+01,8.8272e-05,5.0000e+01,1.8463e+02,2.1940e+02,1.8764e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,8,5,9:10,5,7,7 chr2 120980429 . C . PASS END=120980429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 120980430 . C . PASS END=120980430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 120980431 . C . PASS END=120980436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 120980437 . C . PASS END=120980439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:30:0,77,1131:0,77,255:26,0 chr2 120980440 . C . PASS END=120980441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 120980442 . T . PASS END=120980443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 120980444 . G . PASS END=120980444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 120980445 . G . PASS END=120980450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 120980451 . G . PASS END=120980451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1023:0,57,255:25,0 chr2 120980452 . C . PASS END=120980452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 120980453 . C . PASS END=120980453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr2 120980454 . G . PASS END=120980460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:29,0 chr2 120980461 . C . PASS END=120980461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 120980462 . G . PASS END=120980462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 120980463 . G . PASS END=120980463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 120980464 . A . PASS END=120980465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 120980466 . G . PASS END=120980472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1125:0,90,255:30,0 chr2 120980473 . A . PASS END=120980473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 120980474 . G . PASS END=120980479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 120980480 . A . PASS END=120980480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 120980481 . G . PASS END=120980481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 120980482 . A . PASS END=120980486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 120980487 . C . PASS END=120980487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:25,0 chr2 120980488 . A . PASS END=120980492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 120980493 . G . PASS END=120980493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 120980494 . C . PASS END=120980512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,953:0,62,255:26,0 chr2 120980513 . T . PASS END=120980513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 120980514 . A . PASS END=120980516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 120980517 . G . PASS END=120980517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 120980518 . G . PASS END=120980529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 120980530 . T . PASS END=120980549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 120980550 . C . PASS END=120980552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 120997683 . A . PASS END=120997701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1180:0,93,255:34,0 chr2 121028519 . A . PASS END=121028534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,126,255:40,0 chr2 121036191 . C . PASS END=121036194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr2 121036195 . T . PASS END=121036195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 121036196 . C . PASS END=121036199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr2 121036200 . A . PASS END=121036200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 121036201 . G . PASS END=121036208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,660:0,54,255:19,0 chr2 121036209 . T . PASS END=121036210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 121036211 . T . PASS END=121036211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 121036212 . G . PASS END=121036240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:24,0 chr2 121036241 . A . PASS END=121036241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 121036242 . T . PASS END=121036245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 121036246 . T . PASS END=121036246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 121036247 . G . PASS END=121036247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 121036248 . C . PASS END=121036248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 121036249 . C . PASS END=121036268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,939:0,75,255:25,0 chr2 121036269 . G . PASS END=121036269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:20,0 chr2 121036270 . C . PASS END=121036315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,908:0,61,255:26,0 chr2 121036316 . G . PASS END=121036316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 121036317 . G . PASS END=121036320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 121036321 . G . PASS END=121036321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 121036322 . T . PASS END=121036325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 121036326 . C . PASS END=121036326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 121036327 . C . PASS END=121036332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 121036333 . G . PASS END=121036337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 121036338 . A . PASS END=121036338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,759:0,35,255:18,0 chr2 121036339 . G . PASS END=121036340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 121036341 . T . PASS END=121036342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 121036343 . A . PASS END=121036354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 121038411 . G . PASS END=121038483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:94:0,120,1800:0,215,255:40,0 chr2 121043450 . T . PASS END=121043459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,878:0,72,255:26,0 chr2 121043460 . A . PASS END=121043462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,983:0,84,255:29,0 chr2 121043463 . A . PASS END=121043463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 121043464 . T . PASS END=121043466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1035:0,87,255:30,0 chr2 121043467 . A . PASS END=121043516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1094:0,90,255:37,0 chr2 121043517 . A . PASS END=121043517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1173:0,64,255:34,0 chr2 121043518 . A . PASS END=121043546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,94,255:36,0 chr2 121043547 . G . PASS END=121043612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 121043613 . T . PASS END=121043614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 121043615 . T . PASS END=121043624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 121043625 . A . PASS END=121043658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,698:0,44,255:19,0 chr2 121047156 . G . PASS END=121047303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:28:0,84,1055:0,84,255:40,0 chr2 121047304 . T . PASS END=121047307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 121047308 . C . PASS END=121047310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 121047311 . A . PASS END=121047312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 121047313 . A . PASS END=121047318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1147:0,80,255:28,0 chr2 121047319 . G . PASS END=121047329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr2 121047330 . C . PASS END=121047333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:26:0,51,765:0,65,255:18,0 chr2 121050717 . G . PASS END=121050836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:58:0,120,1800:0,158,255:40,0 chr2 121100026 . A . PASS END=121100050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,931:0,78,255:26,0 chr2 121100051 . A . PASS END=121100051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 121100052 . G . PASS END=121100085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr2 121100086 . A . PASS END=121100086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 121100087 . G . PASS END=121100089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,788:0,30,255:22,1 chr2 121100090 . C . PASS END=121100090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 121100091 . C . PASS END=121100106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr2 121101498 . A . PASS END=121101603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:34:0,96,1355:0,102,255:40,0 chr2 121102463 . C . PASS END=121102463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 121102464 . T . PASS END=121102464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr2 121102465 . C . PASS END=121102465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 121102466 . G . PASS END=121102466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 121102467 . A . PASS END=121102467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr2 121102468 . G . PASS END=121102468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 121102469 . C . PASS END=121102469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr2 121102470 . G . PASS END=121102471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 121102472 . G . PASS END=121102472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr2 121102473 . G . PASS END=121102475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,491:0,45,255:16,0 chr2 121102476 . G . PASS END=121102479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr2 121102480 . G . PASS END=121102480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 121102481 . G . PASS END=121102481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 121102482 . A . PASS END=121102483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr2 121102484 . C . PASS END=121102485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 121102486 . T . PASS END=121102486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,443:0,18,255:15,0 chr2 121102487 . C . PASS END=121102488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 121102489 . C . PASS END=121102489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 121102490 . C . PASS END=121102490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 121102491 . T . LowGQ END=121102491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,443:4,0,255:14,0 chr2 121102492 . C . PASS END=121102496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 121102497 . A . PASS END=121102497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,468:0,31,255:14,0 chr2 121102498 . C . PASS END=121102499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr2 121102500 . G . PASS END=121102500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 121102501 . G . PASS END=121102505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr2 121102506 . A . PASS END=121102506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,553:0,23,255:15,0 chr2 121102507 . C . PASS END=121102510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 121102511 . A . PASS END=121102511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr2 121102512 . C . PASS END=121102514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 121102515 . T . PASS END=121102515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,494:0,4,255:12,0 chr2 121102516 . C . PASS END=121102517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:14,0 chr2 121102518 . C . PASS END=121102518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 121102519 . T . LowGQ END=121102519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,380:24,0,255:13,0 chr2 121102520 . C . PASS END=121102522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 121102523 . C . PASS END=121102523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 121102524 . C . PASS END=121102525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr2 121102526 . C . PASS END=121102526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 121102527 . T . LowGQ END=121102527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,388:24,0,255:13,0 chr2 121102528 . T . PASS END=121102528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:13,0 chr2 121102529 . T . LowGQ END=121102529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:13,0 chr2 121102530 . T . PASS END=121102530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 121102531 . T . PASS END=121102532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:13,0 chr2 121102533 . C . LowGQ END=121102533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,388:16,0,255:12,0 chr2 121102534 . T . PASS END=121102534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 121102535 . G . PASS END=121102536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 121102537 . C . PASS END=121102537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 121102538 . A . PASS END=121102541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,566:0,34,255:13,0 chr2 121102542 . T . PASS END=121102542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:11,0 chr2 121102543 . C . PASS END=121102543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 121102544 . T . PASS END=121102544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,474:0,4,255:12,0 chr2 121102545 . A . PASS END=121102545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:11,0 chr2 121102546 . T . PASS END=121102546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,442:0,9,255:12,0 chr2 121102547 . C . PASS END=121102548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 121102549 . C . PASS END=121102549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:11,0 chr2 121102550 . A . PASS END=121102550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr2 121102551 . A . PASS END=121102551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 121102552 . C . PASS END=121102552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr2 121102553 . G . PASS END=121102553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:11,0 chr2 121102554 . C . PASS END=121102554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 121102555 . G . PASS END=121102555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:11,0 chr2 121102556 . C . PASS END=121102557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 121102558 . C . PASS END=121102569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:12:0,21,315:0,28,255:8,0 chr2 121102570 . G . PASS END=121102570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr2 121102571 . A . PASS END=121102571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 121102572 . T . PASS END=121102576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 121102577 . C . PASS END=121102579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 121102580 . C . PASS END=121102580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,1 chr2 121102581 . T . PASS END=121102581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:4:13:0,4,362:0,4,255:10,1 chr2 121102582 . T . PASS END=121102585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 121102586 . T . PASS END=121102587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr2 121102588 . C . PASS END=121102590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 121102591 . C . PASS END=121102591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,1 chr2 121102592 . T . LowGQ END=121102593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,296:0,0,255:12,1 chr2 121102594 . G . PASS END=121102600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 121102601 . A . PASS END=121102601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 121102602 . A . PASS END=121102605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 121102606 . G . PASS END=121102606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 121102607 . G . PASS END=121102607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 121102608 . G . PASS END=121102614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 121102615 . A . PASS END=121102615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr2 121102616 . A . PASS END=121102619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 121102620 . A . PASS END=121102620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:9,0 chr2 121102621 . A . PASS END=121102621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 121102622 . G . PASS END=121102624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 121102625 . A . PASS END=121102625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 121102626 . G . PASS END=121102626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 121102627 . A . PASS END=121102627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 121102628 . C . PASS END=121102637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr2 121102638 . G . PASS END=121102638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 121102639 . A . LowGQ END=121102639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,308:0,0,255:8,0 chr2 121102640 . A . PASS END=121102652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:10,0 chr2 121102653 . G . PASS END=121102684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr2 121102685 . G . PASS END=121102695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,352:0,30,255:11,0 chr2 121102696 . G . PASS END=121102696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 121102697 . C . PASS END=121102711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 121102712 . C . PASS END=121102728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:14,0 chr2 121102729 . G . PASS END=121102729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 121102730 . G . PASS END=121102730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 121102731 . T . PASS END=121102735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:35:15:0,35,585:0,35,255:15,0 chr2 121102736 . G . PASS END=121102817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,621:0,41,255:19,0 chr2 121102818 . A . PASS END=121102823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:21,0 chr2 121102824 . A . PASS END=121102847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:19:0,42,630:0,44,255:19,0 chr2 121102848 . T . PASS END=121102848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:13,0 chr2 121102849 . G . PASS END=121102849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 121102850 . C . PASS END=121102885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 121102886 . C . PASS END=121102886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:10,0 chr2 121102887 . G . PASS END=121102888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 121102889 . C . PASS END=121102889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:10,0 chr2 121102890 . C . PASS END=121102891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 121102892 . G . PASS END=121102892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 121102893 . G . PASS END=121102899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 121102900 . A . LowGQ END=121102900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:12,0 chr2 121102901 . G . PASS END=121102903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 121102904 . A . PASS END=121102904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 121102905 . G . PASS END=121102906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 121102907 . C . PASS END=121102908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 121102909 . G . PASS END=121102934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,449:0,36,255:12,0 chr2 121102935 . G . PASS END=121102935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 121102936 . C . PASS END=121102939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 121102940 . C . PASS END=121102941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr2 121102942 . G . PASS END=121102958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 121102959 . A . PASS END=121102978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr2 121102979 . C . PASS END=121102989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 121102990 . G . PASS END=121102990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 121102991 . G . PASS END=121102995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 121102996 . C . PASS END=121102996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 121102997 . A . PASS END=121103011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr2 121103012 . A . LowGQ END=121103012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr2 121103013 . A . PASS END=121103014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 121103015 . T . PASS END=121103015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr2 121103016 . T . PASS END=121103091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 121103092 . G . PASS END=121103092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 121103093 . C . PASS END=121103108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 121103109 . C . PASS END=121103121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:6:0,15,210:0,18,210:6,0 chr2 121103122 . G . PASS END=121103146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,108:0,9,108:3,0 chr2 121103147 . G . PASS END=121103185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 121103186 . T . LowGQ END=121103247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,16:3,0 chr2 121103248 . C . PASS END=121103269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:6,0 chr2 121103270 . G . PASS END=121103274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:8,0 chr2 121103275 . G . PASS END=121103280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 121103281 . C . PASS END=121103290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 121103291 . C . PASS END=121103291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 121103292 . T . PASS END=121103296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 121103297 . C . PASS END=121103297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 121103298 . G . PASS END=121103338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,553:0,45,255:19,0 chr2 121103339 . T . PASS END=121103344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 121103345 . A . PASS END=121103348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 121103349 . T . PASS END=121103357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121103358 . G . PASS END=121103361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:19,0 chr2 121103362 . G . PASS END=121103362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr2 121103363 . C . PASS END=121103413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr2 121103414 . G . PASS END=121103414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 121103415 . C . PASS END=121103431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 121103432 . A . PASS END=121103452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,410:0,33,255:12,0 chr2 121103453 . A . PASS END=121103462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr2 121103463 . G . PASS END=121103473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,213:6,0 chr2 121103474 . C . PASS END=121103480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 121103481 . G . PASS END=121103482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 121103483 . G . PASS END=121103490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 121103765 . A . PASS END=121103795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 121103796 . C . PASS END=121103848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 121103849 . T . PASS END=121103890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 121103891 . C . PASS END=121103903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 121103904 . C . LowGQ END=121103904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 121103905 . C . PASS END=121103907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 121103908 . G . LowGQ END=121103908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 121103909 . G . PASS END=121103910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 121103911 . T . LowGQ END=121103911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr2 121103912 . G . PASS END=121103915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 121103916 . C . LowGQ END=121103916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 121103917 . G . PASS END=121103917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 121103918 . C . LowGQ END=121103918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr2 121103919 . A . PASS END=121103919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 121103920 . G . LowGQ END=121103920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:5,0,82:3,0 chr2 121103921 . G . PASS END=121103921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 121103922 . A . LowGQ END=121103922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 121103923 . C . PASS END=121103925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:11:4:0,11,125:0,11,125:8,0 chr2 121103926 . C . PASS END=121103930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 121103931 . C . PASS END=121103932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:10:9:0,10,278:0,10,255:9,0 chr2 121103933 . T . PASS END=121103933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 121103934 . C . PASS END=121103935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 121103936 . T . PASS END=121103950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:11,0 chr2 121103951 . C . PASS END=121103951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 121103952 . G . PASS END=121103956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 121103957 . G . PASS END=121103957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 121103958 . A . PASS END=121103959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 121103960 . G . PASS END=121103960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 121103961 . A . PASS END=121103964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 121103965 . C . PASS END=121103965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 121103966 . G . PASS END=121103966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 121103967 . G . PASS END=121103969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 121103970 . G . PASS END=121103970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr2 121103971 . A . PASS END=121103971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 121103972 . G . PASS END=121103972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:8,0 chr2 121103973 . T . PASS END=121103973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 121103974 . G . PASS END=121103978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 121103979 . G . PASS END=121103979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr2 121103980 . C . PASS END=121103982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 121103983 . C . PASS END=121104005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr2 121104006 . A . PASS END=121104007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 121104008 . A . PASS END=121104070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:12,0 chr2 121104071 . A . PASS END=121104075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:12:0,21,315:0,25,255:9,0 chr2 121104076 . C . PASS END=121104114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr2 121104115 . G . PASS END=121104117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 121104118 . C . PASS END=121104126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 121104127 . G . PASS END=121104127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 121104128 . G . PASS END=121104130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 121104131 . A . PASS END=121104137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 121104138 . A . PASS END=121104138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 121104139 . C . PASS END=121104146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 121104147 . G . PASS END=121104164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 121104165 . C . PASS END=121104173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 121104174 . A . PASS END=121104177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 121104178 . G . PASS END=121104178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 121104179 . C . PASS END=121104190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:12,0 chr2 121104191 . A . PASS END=121104191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 121104192 . T . PASS END=121104195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 121104196 . C . PASS END=121104206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:11:0,20,360:0,20,255:9,0 chr2 121104207 . A . PASS END=121104208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr2 121104209 . A . PASS END=121104209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 121104210 . C . PASS END=121104210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr2 121104211 . A . PASS END=121104212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 121106675 . A . PASS END=121106704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:26,0 chr2 121106705 . A . PASS END=121106705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:24,0 chr2 121106706 . C . PASS END=121106708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 121106709 . C . PASS END=121106709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 121106710 . T . PASS END=121106714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,968:0,68,255:26,0 chr2 121106715 . C . PASS END=121106723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 121106724 . A . PASS END=121106724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:28,0 chr2 121106725 . G . PASS END=121106728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 121106729 . A . PASS END=121106729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 121106730 . C . PASS END=121106733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 121106734 . A . PASS END=121106734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 121106735 . A . PASS END=121106739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 121106740 . T . PASS END=121106740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,808:0,73,255:27,0 chr2 121106741 . T . PASS END=121106743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 121106744 . T . PASS END=121106745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 121106746 . G . PASS END=121106748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 121106749 . C . PASS END=121106752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 121106753 . C . PASS END=121106759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 121106760 . G . PASS END=121106760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr2 121106761 . T . PASS END=121106769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1096:0,90,255:30,0 chr2 121106770 . C . PASS END=121106770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr2 121106771 . T . PASS END=121106817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1127:0,80,255:32,0 chr2 121106818 . C . PASS END=121106818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1055:0,41,255:30,0 chr2 121106819 . G . PASS END=121106856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:33,0 chr2 121106857 . A . PASS END=121106863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 121106864 . A . PASS END=121106866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 121106867 . T . PASS END=121106892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:25,0 chr2 121106893 . C . PASS END=121106905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr2 121106906 . A . PASS END=121106906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121106907 . T . PASS END=121106948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,652:0,47,255:19,0 chr2 121106949 . G . PASS END=121106950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121106951 . G . PASS END=121106951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 121106952 . C . PASS END=121106952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:18,0 chr2 121106953 . G . PASS END=121106965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 121106966 . A . PASS END=121106996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:24,0 chr2 121106997 . G . PASS END=121106997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 121106998 . C . PASS END=121106998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr2 121106999 . T . PASS END=121106999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 121107000 . G . PASS END=121107019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,878:0,66,255:24,0 chr2 121107020 . T . PASS END=121107020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 121107021 . G . PASS END=121107037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr2 121107038 . C . PASS END=121107041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 121107042 . C . PASS END=121107042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 121107043 . C . PASS END=121107047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr2 121107048 . C . PASS END=121107049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 121107050 . T . PASS END=121107054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 121107055 . G . PASS END=121107066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:17,0 chr2 121107067 . C . PASS END=121107067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 121107068 . G . PASS END=121107070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 121107071 . T . PASS END=121107071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 121107072 . G . PASS END=121107074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 121107075 . C T, 44.99 PASS DP=16;MQ=250.00;MQRankSum=3.059;ReadPosRankSum=3.059;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,5,0:0.312,0.000:16:7,4,0:4,1,0:44:80,0,50,179,385,564:181,0,255:10,0:4.4994e+01,1.5920e-04,5.3000e+01,1.7884e+02,4.2020e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,1,4:5,6,2,3 chr2 121107076 . G . PASS END=121107078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 121107079 . A . PASS END=121107079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 121107080 . G . PASS END=121107089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr2 121107090 . C . PASS END=121107090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 121107091 . A . PASS END=121107112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:17,0 chr2 121107113 . G . PASS END=121107121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr2 121107122 . G . PASS END=121107122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr2 121107123 . G . PASS END=121107149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,590:0,51,255:18,0 chr2 121107150 . C . PASS END=121107150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 121107151 . T . PASS END=121107155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr2 121107156 . T . PASS END=121107156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:18,0 chr2 121107157 . G . PASS END=121107168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 121107169 . A . PASS END=121107171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 121107172 . G . PASS END=121107179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 121107180 . C . PASS END=121107204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,815:0,63,255:24,0 chr2 121107205 . T . PASS END=121107205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 121107206 . A . PASS END=121107213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 121107214 . A . PASS END=121107214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:19,0 chr2 121107215 . A . PASS END=121107221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 121107222 . T . PASS END=121107222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 121107223 . G . PASS END=121107235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:23,0 chr2 121107236 . C . PASS END=121107236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:20,0 chr2 121107237 . A . PASS END=121107237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 121107238 . G . PASS END=121107246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 121107247 . G . PASS END=121107247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 121107248 . C . PASS END=121107248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:21,0 chr2 121107249 . A . PASS END=121107250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 121107251 . G . PASS END=121107251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 121107252 . G . PASS END=121107285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,930:0,62,255:26,0 chr2 121107286 . G . PASS END=121107352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1125:0,90,255:38,0 chr2 121107353 . A . PASS END=121107353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr2 121107354 . G . PASS END=121107407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:35:0,81,1181:0,81,255:40,0 chr2 121107408 . G . PASS END=121107408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:32,0 chr2 121107409 . G . PASS END=121107409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 121107410 . A . PASS END=121107410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:31,0 chr2 121107411 . C . PASS END=121107419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr2 121107420 . C . PASS END=121107439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,70,255:26,0 chr2 121107440 . G . PASS END=121107450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:19,0 chr2 121554897 . A . PASS END=121554903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,458:0,39,255:13,0 chr2 121554904 . C . PASS END=121554917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:16,0 chr2 121554918 . A . PASS END=121554918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 121554919 . C . PASS END=121554952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:19,0 chr2 121554953 . C . PASS END=121554975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:22,0 chr2 121554976 . A . PASS END=121554976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:19,0 chr2 121554977 . C . PASS END=121554978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121554979 . C . PASS END=121554980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 121554981 . G . PASS END=121554981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:17,0 chr2 121554982 . G . PASS END=121554994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:18,0 chr2 121554995 . T . PASS END=121554998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:18:0,30,450:0,54,255:11,0 chr2 121554999 . T . PASS END=121555005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:27:14:0,27,405:0,29,255:9,0 chr2 121555006 . T . PASS END=121555014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 121555015 . C . PASS END=121555021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 121555022 . A . PASS END=121555022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 121555023 . G . PASS END=121555026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 121555027 . C . PASS END=121555041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 121555042 . G . PASS END=121555044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 121624774 . A . PASS END=121624784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 121624785 . G . PASS END=121624836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,454:0,42,255:19,0 chr2 121624837 . C . PASS END=121624867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 121624868 . C . PASS END=121624918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,612:0,48,255:18,0 chr2 121624919 . T . PASS END=121624919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 121624920 . G . PASS END=121624931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 121624932 . C . PASS END=121624932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 121624933 . C . PASS END=121624963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,615:0,48,255:17,0 chr2 121624964 . A . PASS END=121624964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 121624965 . G . PASS END=121624972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 121624973 . G . PASS END=121624973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:13,0 chr2 121624974 . C . PASS END=121624974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 121624975 . G . PASS END=121624975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 121624976 . C . PASS END=121624989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,735:0,60,255:20,0 chr2 121624990 . C . PASS END=121624990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr2 121624991 . C . PASS END=121624992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 121624993 . C . PASS END=121624993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 121624994 . C . PASS END=121624996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr2 121624997 . C . PASS END=121625007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 121625008 . G . PASS END=121625010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 121625011 . T . PASS END=121625012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 121625013 . A . PASS END=121625016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 121625017 . A . PASS END=121625017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 121625018 . G . PASS END=121625047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 121625048 . T . PASS END=121625048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 121625049 . C . PASS END=121625052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,922:0,72,255:24,0 chr2 121625053 . G . PASS END=121625053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 121625054 . C . PASS END=121625069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:26,0 chr2 121625070 . T . PASS END=121625072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 121625073 . A . PASS END=121625085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,925:0,64,255:26,0 chr2 121625086 . C . PASS END=121625086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 121625087 . C . PASS END=121625096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 121625097 . T . PASS END=121625098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 121625099 . C . PASS END=121625102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 121625103 . C . PASS END=121625110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 121625111 . A . PASS END=121625113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 121625114 . G . PASS END=121625114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 121625115 . C . PASS END=121625125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr2 121625126 . C . PASS END=121625131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 121625132 . C . PASS END=121625140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 121625141 . G . PASS END=121625144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1063:0,84,255:28,0 chr2 121625145 . T . PASS END=121625159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:26,0 chr2 121625160 . T . PASS END=121625162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 121625163 . C . PASS END=121625169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121625170 . C . PASS END=121625171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,689:0,47,255:19,0 chr2 121625172 . G . PASS END=121625173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121649073 . A . PASS END=121649079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 121676411 . A . PASS END=121676446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,145,255:40,0 chr2 121676447 . A . PASS END=121676459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,140,255:40,0 chr2 121684923 . C . PASS END=121684923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1498:0,120,255:40,0 chr2 121684937 . T . PASS END=121685042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:42:0,93,1465:0,93,255:40,0 chr2 121708819 . G . PASS END=121708820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 121708821 . C . PASS END=121708821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 121708822 . C . PASS END=121708824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr2 121708825 . T . PASS END=121708825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 121708826 . G . PASS END=121708842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr2 121708843 . T . PASS END=121708843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr2 121708844 . G . PASS END=121708845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,915:0,75,255:25,0 chr2 121708846 . C . PASS END=121708846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 121708847 . A . PASS END=121708858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,74,255:24,0 chr2 121708859 . T . PASS END=121708859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 121708860 . C . PASS END=121708863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 121708864 . G . PASS END=121708864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 121708865 . A . PASS END=121708873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 121708874 . T . PASS END=121708874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,770:0,41,255:21,1 chr2 121708875 . C . PASS END=121708875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:22,0 chr2 121708876 . C . PASS END=121708878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 121708879 . G . PASS END=121708879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:18,0 chr2 121708880 . C . PASS END=121708880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121708881 . A . PASS END=121708881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,731:0,30,255:17,0 chr2 121708882 . C . PASS END=121708889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,746:0,50,255:19,0 chr2 121708890 . G . PASS END=121708890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121708891 . C . PASS END=121708894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 121708895 . G . PASS END=121708895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121708896 . G . PASS END=121708896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 121708897 . G . PASS END=121708900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121708901 . T . PASS END=121708906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr2 121708907 . T . LowGQ END=121708907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,524:6,0,255:15,0 chr2 121708908 . T . PASS END=121708919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,652:0,41,255:18,0 chr2 121708920 . A . PASS END=121708920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,525:0,7,255:14,0 chr2 121708921 . C . PASS END=121708924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,658:0,43,255:18,0 chr2 121708925 . T . PASS END=121708925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,607:0,16,255:17,0 chr2 121708926 . A . PASS END=121708926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:16,0 chr2 121708927 . C . PASS END=121708928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,684:0,46,255:17,0 chr2 121708929 . T . PASS END=121708929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,590:0,27,255:17,0 chr2 121708930 . G . PASS END=121708930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 121708931 . A . PASS END=121708931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,628:0,13,255:15,0 chr2 121708932 . A . PASS END=121708934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:17,0 chr2 121708935 . C . PASS END=121708935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:17,0 chr2 121708936 . C . PASS END=121708937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 121708938 . A . PASS END=121708938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,596:0,13,255:16,0 chr2 121708939 . C . PASS END=121708949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr2 121708950 . A . PASS END=121708950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:15,0 chr2 121708951 . C . PASS END=121708957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,765:0,50,255:18,0 chr2 121708958 . T . PASS END=121708958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:17,0 chr2 121708959 . C . PASS END=121708961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 121708962 . T . PASS END=121708962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:17,0 chr2 121708963 . G . PASS END=121708975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,659:0,41,255:17,0 chr2 121708976 . A . PASS END=121708976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 121708977 . C . PASS END=121709013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr2 121709014 . C . PASS END=121709016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 121709017 . T . PASS END=121709017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr2 121709018 . G . PASS END=121709021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr2 121712821 . T . PASS END=121712833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr2 121712834 . C . PASS END=121712853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,723:0,63,255:23,0 chr2 121712854 . T . PASS END=121712854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 121712855 . T . PASS END=121712880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,853:0,62,255:26,0 chr2 121712881 . C . PASS END=121712882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 121712883 . T . PASS END=121712916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,939:0,64,255:26,0 chr2 121712917 . G . PASS END=121712917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 121712918 . C . PASS END=121712923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 121712924 . C . PASS END=121712924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 121712925 . G . PASS END=121712925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 121712926 . C . PASS END=121712926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 121712927 . G . PASS END=121712940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,939:0,64,255:24,0 chr2 121712941 . T . PASS END=121712941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 121712942 . G . PASS END=121712943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 121712944 . T . PASS END=121712944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 121712945 . G . PASS END=121712947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 121712948 . G . PASS END=121712948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 121712949 . C . PASS END=121712949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121712950 . A . PASS END=121712958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,792:0,52,255:19,0 chr2 121712959 . G . PASS END=121712959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121712960 . C . PASS END=121712960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,664:0,49,255:20,0 chr2 121712961 . G . PASS END=121712961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121712962 . C . PASS END=121712962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 121712963 . T . PASS END=121712965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121712966 . C . PASS END=121712966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 121712967 . A . PASS END=121712967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121712968 . G . PASS END=121712979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,675:0,44,255:19,0 chr2 121712980 . T . PASS END=121712980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,615:0,21,255:15,0 chr2 121712981 . C . PASS END=121712982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 121712983 . A . PASS END=121712997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 121712998 . C . PASS END=121712998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 121712999 . C . PASS END=121713000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 121713001 . T . PASS END=121713006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 121726290 . T . PASS END=121726409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:40:0,104,1436:0,104,255:40,0 chr2 121726410 . C . PASS END=121726446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:40:0,104,1457:0,104,255:40,0 chr2 121726447 . G A, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=4.860;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,21,0:0.538,0.000:39:7,9,0:11,12,0:48:85,0,49,751,636,1387:255,0,255:17,0:5.0000e+01,6.7822e-05,5.2493e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,8,13:10,8,8,13 chr2 121726448 . G . PASS END=121726479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:34:0,93,1395:0,102,255:40,0 chr2 121726480 . G . PASS END=121726484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:24,0 chr2 121726485 . C . PASS END=121726492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,86,255:25,0 chr2 121727969 . C . PASS END=121727971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 121727972 . A . PASS END=121727972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 121727973 . G . PASS END=121727973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:21:23:0,21,639:0,21,255:20,0 chr2 121727974 . C . PASS END=121727980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 121727981 . C . PASS END=121727983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,687:0,49,255:22,0 chr2 121727984 . C . PASS END=121727994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:26,0 chr2 121727995 . T . PASS END=121727995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:6:26:0,6,774:0,6,255:23,0 chr2 121727996 . C . PASS END=121727998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,887:0,78,255:26,0 chr2 121727999 . C . PASS END=121728002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,983:0,87,255:29,0 chr2 121728003 . G . PASS END=121728003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,845:0,15,255:26,0 chr2 121728004 . T . PASS END=121728008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1058:0,90,255:30,0 chr2 121728009 . T . PASS END=121728009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 121728010 . A . PASS END=121728013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 121728014 . G . PASS END=121728014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:31,0 chr2 121728015 . C . PASS END=121728016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr2 121728017 . G . PASS END=121728017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:31,0 chr2 121728018 . A . PASS END=121728019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 121728020 . T . PASS END=121728020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1017:0,66,255:31,0 chr2 121728021 . C . PASS END=121728072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1107:0,80,255:33,0 chr2 121728073 . T . PASS END=121728073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 121728074 . C . PASS END=121728083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1133:0,80,255:28,0 chr2 121728084 . C . PASS END=121728084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 121728085 . C . PASS END=121728087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 121728088 . C . PASS END=121728088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 121728089 . C . PASS END=121728102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:30,0 chr2 121728103 . A . PASS END=121728134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,61,255:26,0 chr2 121728135 . C . PASS END=121728135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:19,0 chr2 121728136 . C . PASS END=121728137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121728138 . A . PASS END=121728141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 121728142 . A . PASS END=121728142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:19,0 chr2 121728143 . G . PASS END=121728143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 121728144 . C . PASS END=121728150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 121728151 . G . PASS END=121728151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 121728152 . C . PASS END=121728152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:19,0 chr2 121728153 . A . PASS END=121728153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 121728154 . G . PASS END=121728171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr2 121728172 . A . PASS END=121728172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,507:0,37,255:15,0 chr2 121728173 . C . PASS END=121728176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr2 121728177 . A . PASS END=121728182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:31:16:0,31,491:0,31,255:13,0 chr2 121729517 . A . PASS END=121729527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,105,1327:0,105,255:38,0 chr2 121729528 . C . PASS END=121729630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1149:0,80,255:40,0 chr2 121729631 . C . PASS END=121729639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr2 121732500 . G . PASS END=121732518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,978:0,81,255:29,0 chr2 121732519 . G . PASS END=121732519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 121732520 . C . PASS END=121732536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,989:0,85,255:36,0 chr2 121732537 . T . PASS END=121732537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:36,0 chr2 121732538 . T . PASS END=121732662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:35:0,87,1305:0,98,255:40,0 chr2 121732663 . A . PASS END=121732663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:25,0 chr2 121732664 . C . PASS END=121732676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:29,0 chr2 121732677 . C . PASS END=121732685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 121732691 . C . PASS END=121732691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 121736010 . C . PASS END=121736117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,980:0,87,255:40,0 chr2 121736118 . C . PASS END=121736126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 121736127 . C . PASS END=121736127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:23,0 chr2 121736128 . G . PASS END=121736146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 121736147 . C . PASS END=121736159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:19:0,48,720:0,57,255:19,0 chr2 121740292 . T . PASS END=121740320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:19,0 chr2 121740321 . C . PASS END=121740351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,726:0,63,255:26,0 chr2 121740352 . C . PASS END=121740353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 121740354 . C . PASS END=121740408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,65,255:26,0 chr2 121740409 . A . PASS END=121740412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,779:0,36,255:22,0 chr2 121740413 . C . PASS END=121740443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr2 121740444 . C . PASS END=121740451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 121740452 . A . PASS END=121740454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 121740455 . A . PASS END=121740456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:14,0 chr2 121742040 . T . PASS END=121742040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 121742047 . A . PASS END=121742080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr2 121742081 . A . PASS END=121742081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr2 121742082 . G . PASS END=121742086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 121742087 . A . PASS END=121742102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr2 121742103 . T . PASS END=121742103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,833:0,47,255:25,0 chr2 121742104 . C . PASS END=121742110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 121742111 . A . PASS END=121742111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 121742112 . G . PASS END=121742123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:27,0 chr2 121742124 . G . PASS END=121742124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:26,0 chr2 121742125 . G . PASS END=121742137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 121742138 . A . PASS END=121742176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,842:0,64,255:26,0 chr2 121742177 . T . PASS END=121742178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 121742179 . C . PASS END=121742180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 121742181 . C . PASS END=121742184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 121742185 . C . PASS END=121742185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 121742186 . C . PASS END=121742186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 121742187 . G . PASS END=121742187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 121742188 . C . PASS END=121742189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 121742190 . G . PASS END=121742208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,862:0,64,255:26,0 chr2 121742209 . A . PASS END=121742210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,798:0,42,255:22,0 chr2 121742211 . T . PASS END=121742217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 121742218 . G . PASS END=121742218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 121742219 . G . PASS END=121742225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 121742226 . G . PASS END=121742226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:19,0 chr2 121742227 . C . PASS END=121742228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 121742229 . T . PASS END=121742230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:20,0 chr2 121742231 . G . PASS END=121742231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 121742232 . C . PASS END=121742243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,56,255:19,0 chr2 121742244 . C . PASS END=121742244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121742245 . A . PASS END=121742245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 121742246 . C . PASS END=121742259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 121742260 . A . PASS END=121742260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 121742261 . C . PASS END=121742264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 121742265 . C . PASS END=121742265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:20,0 chr2 121742266 . C . PASS END=121742267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121742268 . G . PASS END=121742314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,568:0,41,255:19,0 chr2 121742315 . C . PASS END=121742317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 121742318 . G . PASS END=121742319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 121742320 . G . PASS END=121742320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,550:0,12,255:13,0 chr2 121743854 . C . PASS END=121743865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 121743866 . A . PASS END=121743866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:17,0 chr2 121743867 . G . PASS END=121743867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 121743868 . C . PASS END=121743868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:17,0 chr2 121743869 . C . PASS END=121743876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,643:0,51,255:18,0 chr2 121743877 . C . PASS END=121743877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 121743878 . C . PASS END=121743885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 121743886 . C . PASS END=121743901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 121743902 . T . PASS END=121743902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 121743903 . C . PASS END=121743915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:24,0 chr2 121743916 . T . PASS END=121743916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 121743917 . G . PASS END=121743934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,870:0,72,255:24,0 chr2 121743935 . G . PASS END=121743935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 121743936 . G . PASS END=121743937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 121743938 . G . PASS END=121743938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 121743939 . T . PASS END=121743946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 121743947 . C . PASS END=121743947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 121743948 . C . PASS END=121743949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 121743950 . G . PASS END=121743950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:18,0 chr2 121743951 . G . PASS END=121743968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 121743969 . T . PASS END=121743972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 121743973 . A . PASS END=121743975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 121743976 . C . PASS END=121743982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121743983 . G . PASS END=121743985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,737:0,47,255:19,0 chr2 121743986 . C . PASS END=121743994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 121743995 . A . PASS END=121743996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:20,0 chr2 121743997 . A . PASS END=121744022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,869:0,69,255:26,0 chr2 121744023 . T . PASS END=121744084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1062:0,80,255:35,0 chr2 121744085 . G . PASS END=121744086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:35,0 chr2 121744087 . G . PASS END=121744087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1239:0,56,255:35,0 chr2 121744088 . C . PASS END=121744138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1189:0,88,255:35,0 chr2 121744139 . G . PASS END=121744139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1108:0,52,255:27,0 chr2 121744140 . G . PASS END=121744155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:30:0,81,1215:0,89,255:32,0 chr2 121744156 . G . PASS END=121744163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 121744164 . C . PASS END=121744166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 121744167 . A . PASS END=121744167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 121744168 . G . PASS END=121744168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 121744169 . C . PASS END=121744185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,68,255:27,0 chr2 121744186 . A . PASS END=121744187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 121744188 . G . PASS END=121744190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 121745784 . G . PASS END=121745801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 121745802 . T . PASS END=121745802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 121745803 . C . PASS END=121745817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 121745818 . C . PASS END=121745818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 121745819 . G . PASS END=121745820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 121745821 . C . PASS END=121745821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 121745822 . G . PASS END=121745827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:9,0 chr2 121745828 . G . PASS END=121745828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 121745829 . C . PASS END=121745829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 121745830 . G . PASS END=121745833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 121745834 . C . PASS END=121745845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr2 121745846 . C . PASS END=121745846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 121745847 . C . PASS END=121745862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:8,0 chr2 121745863 . G . PASS END=121745863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 121745864 . T . PASS END=121745867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 121745868 . C . PASS END=121745872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 121745873 . G . PASS END=121745882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 121745883 . T . PASS END=121745890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 121745891 . C . PASS END=121745893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 121745894 . C . PASS END=121745935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:12,0 chr2 121745936 . G . PASS END=121746022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:18,0 chr2 121746023 . C . PASS END=121746028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 121746029 . C . PASS END=121746031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 121746032 . A . PASS END=121746051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 121746052 . C . PASS END=121746063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 121746064 . C . PASS END=121746083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,482:0,39,255:13,0 chr2 121746084 . G . PASS END=121746085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 121746086 . T . PASS END=121746095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 121746096 . C . PASS END=121746096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:10,0 chr2 121746097 . C . PASS END=121746144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:11,0 chr2 121746145 . G . PASS END=121746168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 121746169 . C . PASS END=121746179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 121746180 . C . PASS END=121746180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 121746181 . T . PASS END=121746184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 121746185 . G . LowDepth;LowGQ END=121746322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 121746323 . A . PASS END=121746345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 121746346 . G . PASS END=121746360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,247:0,21,247:7,0 chr2 121746361 . C . PASS END=121746383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr2 121746384 . G . PASS END=121746401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:9,0 chr2 121746402 . A . PASS END=121746419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 121746420 . A . PASS END=121746421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 121746422 . G . PASS END=121746422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 121746423 . C . LowGQ END=121746423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:9,0 chr2 121746424 . C . PASS END=121746475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 121746476 . G . PASS END=121746500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr2 121746501 . G . PASS END=121746518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 121746519 . A . PASS END=121746528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 121746529 . G . PASS END=121746529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr2 121746530 . A . PASS END=121746532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 121746533 . A . PASS END=121746539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 121746540 . G . PASS END=121746540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr2 121746541 . C . PASS END=121746544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 121746545 . C . PASS END=121746564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:9,0 chr2 121746565 . G . PASS END=121746565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr2 121746566 . C . PASS END=121746567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 121746568 . C . PASS END=121746573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 121746574 . G . PASS END=121746581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 121746582 . T . PASS END=121746582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 121746583 . C . PASS END=121746588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 121746589 . G . PASS END=121746590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr2 121746591 . A . PASS END=121746591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:9,0 chr2 121746592 . C . PASS END=121746600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 121746601 . G . LowGQ END=121746601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:9,0 chr2 121746602 . G . PASS END=121746607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 121746608 . G . PASS END=121746608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 121746609 . T . LowGQ END=121746609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr2 121746610 . G . PASS END=121746610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 121746611 . G . LowGQ END=121746611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr2 121746612 . C . PASS END=121746616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 121746617 . G . PASS END=121746625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 121746626 . G . PASS END=121746626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr2 121746627 . G . PASS END=121746628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121746629 . G . PASS END=121746629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr2 121746630 . C . PASS END=121746633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 121746634 . G . PASS END=121746634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 121746635 . C . PASS END=121746640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 121746641 . G . PASS END=121746641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 121746642 . C . PASS END=121746654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:24,0 chr2 121746655 . G . PASS END=121746691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:30,0 chr2 121746692 . C . PASS END=121746696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1056:0,76,255:26,0 chr2 121746697 . C . PASS END=121746701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 121746702 . A . PASS END=121746702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr2 121746703 . G . PASS END=121746728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr2 121746729 . A . PASS END=121746752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr2 121746753 . C . PASS END=121746765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 121746766 . C . PASS END=121746766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121746767 . T . PASS END=121746785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,673:0,41,255:18,0 chr2 121746786 . T . PASS END=121746786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 121746787 . A . PASS END=121746792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,676:0,54,255:18,0 chr2 121746793 . C . PASS END=121746800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:15,0 chr2 121746801 . T . PASS END=121746801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 121746802 . G . PASS END=121746802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:13,0 chr2 121746803 . C . PASS END=121746803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 121746804 . A . PASS END=121746804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 121746805 . C . PASS END=121746808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 121746809 . C . PASS END=121746810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 121746811 . G . PASS END=121746822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 121746823 . G . PASS END=121746836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 121746837 . A . PASS END=121746850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 121746851 . G . PASS END=121746851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:12,0 chr2 121746852 . C . PASS END=121746872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,690:0,44,255:18,0 chr2 121746873 . A . PASS END=121746873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 121746874 . G . PASS END=121746876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 121746877 . A . PASS END=121746877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr2 121746878 . G . PASS END=121746887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 121746888 . C . PASS END=121746889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr2 121746890 . C . PASS END=121746894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr2 121746895 . C . PASS END=121746895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 121746896 . A . PASS END=121746896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,604:0,2,255:16,0 chr2 121746897 . G . PASS END=121746901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:15:18:0,15,604:0,15,255:17,0 chr2 121746902 . A . PASS END=121746902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 121746903 . A . PASS END=121746903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,535:0,2,255:17,0 chr2 121746904 . C . PASS END=121746904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr2 121746905 . A . PASS END=121746905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:17,0 chr2 121746906 . A . PASS END=121746907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,576:0,18,255:18,0 chr2 121746908 . A . PASS END=121746918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr2 121746919 . T . PASS END=121746940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,670:0,47,255:19,0 chr2 121746941 . T . PASS END=121746941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:17,0 chr2 121746942 . C . PASS END=121746943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:19,0 chr2 121746944 . G . PASS END=121746944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 121746945 . G . PASS END=121746947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 121746948 . C . PASS END=121746953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121746954 . A . PASS END=121746954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 121746955 . C . PASS END=121746955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 121746956 . G T, 44.10 PASS DP=24;MQ=250.00;MQRankSum=3.889;ReadPosRankSum=1.806;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,8,0:0.333,0.000:24:7,3,0:9,5,0:44:79,0,50,286,564,850:238,0,255:13,0:4.4098e+01,1.9078e-04,5.3000e+01,2.8604e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,7,1:9,7,4,4 chr2 121746957 . C . PASS END=121746993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:23,0 chr2 121746994 . G . PASS END=121747010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:24,0 chr2 121747011 . T . PASS END=121747014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr2 121747015 . G . PASS END=121747039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr2 121747040 . C . PASS END=121747135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:18,0 chr2 121747136 . A . PASS END=121747138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 121747139 . C . PASS END=121747140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 121747141 . C . PASS END=121747169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 121747170 . A . PASS END=121747170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 121747171 . G . PASS END=121747188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 121747189 . G . PASS END=121747241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,302:0,24,255:9,0 chr2 121747242 . A . PASS END=121747263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr2 121747264 . C . LowGQ END=121747264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr2 121747265 . A . PASS END=121747274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:13,0 chr2 121747275 . C . PASS END=121747285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr2 121747286 . T . PASS END=121747288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 121747289 . C . PASS END=121747294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 121747295 . T . PASS END=121747295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 121747296 . C . PASS END=121747300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 121747301 . A . PASS END=121747301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 121747302 . G . PASS END=121747311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,631:0,51,255:18,0 chr2 121747312 . A . PASS END=121747315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 121747316 . A . PASS END=121747316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 121747317 . A . PASS END=121747342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 121747343 . C . PASS END=121747343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 121747344 . A . PASS END=121747345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,693:0,63,255:21,0 chr2 121747346 . A . PASS END=121747346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr2 121747347 . C . PASS END=121747352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121747353 . T . PASS END=121747355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 121747356 . C . PASS END=121747356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 121747357 . A . PASS END=121747357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 121747358 . C . PASS END=121747363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 121747364 . C . PASS END=121747368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 121747369 . C . PASS END=121747370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 121747371 . C . PASS END=121747381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,743:0,47,255:19,0 chr2 121747382 . C . PASS END=121747382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 121747383 . G . PASS END=121747405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,653:0,43,255:18,0 chr2 121747406 . G A, 49.92 PASS DP=18;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=2.646;FractionInformativeReads=0.944;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:5,4,0:4,4,0:48:85,0,50,278,285,563:255,0,220:9,0:4.9923e+01,6.6010e-05,5.3000e+01,2.7814e+02,3.1986e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,3,5:5,4,5,3 chr2 121747407 . A . PASS END=121747411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 121747412 . G . PASS END=121747414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 121747415 . C . PASS END=121747428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,721:0,47,255:19,0 chr2 121747429 . A G, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=2.082;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:4,4,0:5,6,0:48:85,0,50,358,322,679:255,0,255:7,0:5.0000e+01,6.5751e-05,5.2887e+01,3.5759e+02,3.5667e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,6,5,5:4,5,5,5 chr2 121747430 . C . PASS END=121747453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:17,0 chr2 121747454 . C . PASS END=121747456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 121747457 . C . PASS END=121747461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 121747462 . G . PASS END=121747462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 121747463 . A . PASS END=121747466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 121747467 . A . PASS END=121747475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr2 121747476 . C . PASS END=121747481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 121747482 . C . PASS END=121747502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:15,0 chr2 121747503 . A . PASS END=121747503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr2 121747504 . C . PASS END=121747546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr2 121747547 . G . PASS END=121747558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 121747559 . G . PASS END=121747582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr2 121747583 . G . PASS END=121747583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:13,0 chr2 121747584 . G . PASS END=121747599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,495:0,32,255:13,0 chr2 121747600 . G . PASS END=121747632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr2 121747633 . C . PASS END=121747661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,731:0,60,255:24,0 chr2 121747662 . A . PASS END=121747662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 121747663 . G . PASS END=121747680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,930:0,68,255:25,0 chr2 121747681 . G . PASS END=121747729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:29,0 chr2 121747730 . G . PASS END=121747731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 121747732 . G . PASS END=121747734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 121747735 . T . PASS END=121747737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 121747738 . G . PASS END=121747739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 121747740 . C . PASS END=121747773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr2 121747774 . T . PASS END=121747791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,57,255:19,0 chr2 121747792 . G . PASS END=121747793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 121747794 . A . PASS END=121747794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 121747795 . C . PASS END=121747803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 121747804 . G . PASS END=121747804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 121747805 . G . PASS END=121747816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 121747817 . A . PASS END=121747817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr2 121747818 . G . PASS END=121747818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 121747819 . C . PASS END=121747820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 121747821 . T . PASS END=121747840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,886:0,69,255:25,0 chr2 121747841 . A . PASS END=121747986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,950:0,81,255:40,0 chr2 121747987 . T . PASS END=121747987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1180:0,53,255:30,0 chr2 121747988 . G . PASS END=121747997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1170:0,83,255:32,0 chr2 121747998 . A . PASS END=121748003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:31:0,78,1170:0,82,255:26,0 chr2 121748004 . T . PASS END=121748004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,994:0,46,255:24,0 chr2 121748005 . G . PASS END=121748012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:27:0,74,1070:0,74,255:26,0 chr2 121748013 . C . PASS END=121748015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 121748016 . A . PASS END=121748019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,903:0,67,255:26,0 chr2 121748020 . T . PASS END=121748020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,938:0,37,255:24,0 chr2 121748021 . G . PASS END=121748049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,955:0,72,255:26,0 chr2 121748050 . T . PASS END=121748050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 121748051 . C . PASS END=121748058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,870:0,62,255:26,0 chr2 121748059 . T . PASS END=121748059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,726:0,44,255:24,0 chr2 121748060 . T . PASS END=121748108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr2 121748109 . A . PASS END=121748109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 121748110 . C . PASS END=121748112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 121748113 . C . PASS END=121748113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 121748114 . T . PASS END=121748151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,824:0,61,255:26,0 chr2 121748152 . C . PASS END=121748158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 121748159 . C . PASS END=121748159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 121748160 . C . PASS END=121748161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 121748162 . G . PASS END=121748162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 121748163 . C . PASS END=121748183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1103:0,90,255:31,0 chr2 121748184 . T . PASS END=121748184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 121748185 . C . PASS END=121748211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1133:0,83,255:31,0 chr2 121748212 . C . PASS END=121748212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:27,0 chr2 121748213 . C . PASS END=121748217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 121748218 . C . PASS END=121748223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr2 121748224 . G . PASS END=121748228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 121748229 . A . PASS END=121748229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 121748230 . G . PASS END=121748234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1180:0,87,255:31,0 chr2 121748235 . T . PASS END=121748235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 121748236 . G . PASS END=121748251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 121748328 . C . PASS END=121748328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:30,0 chr2 121748536 . G . PASS END=121748536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 121748629 . A . PASS END=121748629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1303:0,105,255:35,0 chr2 121748662 . C . PASS END=121748662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 121748963 . G . PASS END=121748963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 121749046 . T . PASS END=121749046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 121749879 . G . PASS END=121749879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 121749911 . T . PASS END=121749911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr2 121749986 . T . PASS END=121749986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 121750004 . C . PASS END=121750004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 121750070 . T . PASS END=121750070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 121750084 . G . PASS END=121750084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:45:0,90,1350:0,135,255:30,0 chr2 121750139 . T . PASS END=121750139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 121750198 . G . PASS END=121750198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 121981917 . T . PASS END=121981949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,151,255:40,0 chr2 121981950 . A G, 50.00 PASS DP=61;MQ=249.98;MQRankSum=6.275;ReadPosRankSum=0.917;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,32,0:0.525,0.000:61:18,12,0:11,20,0:48:85,0,50,1145,1037,2182:255,0,255:28,0:5.0000e+01,6.6269e-05,5.2796e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,16,13,19:20,9,19,13 chr2 121981951 . T . PASS END=121981963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,163,255:40,0 chr2 121983138 . C . PASS END=121983178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:33:0,96,1311:0,98,255:38,0 chr2 121983179 . T . PASS END=121983188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1357:0,95,255:35,0 chr2 121983189 . T . PASS END=121983189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:33,0 chr2 121989402 . C . PASS END=121989405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 121989406 . T . PASS END=121989407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 121989408 . G . PASS END=121989408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:26,0 chr2 121989409 . C . PASS END=121989410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:27,0 chr2 121989411 . C . PASS END=121989412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 121989413 . C . PASS END=121989413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 121989414 . C . PASS END=121989451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1133:0,90,255:40,0 chr2 121989452 . G . PASS END=121989488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,119,1627:0,119,255:40,0 chr2 121989489 . G A, 49.84 PASS DP=42;MQ=249.86;MQRankSum=5.528;ReadPosRankSum=4.974;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:8,15,0:14,5,0:48:85,0,50,707,750,1457:255,0,255:20,0:4.9842e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,12,8:10,12,11,9 chr2 121989490 . A . PASS END=121989526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:36:0,90,1350:0,107,255:40,0 chr2 121989527 . G . PASS END=121989536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,86,255:30,0 chr2 121989537 . G . PASS END=121989541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 121989542 . A . PASS END=121989544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 121991667 . C . PASS END=121991740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1178:0,83,255:40,0 chr2 121991741 . A . PASS END=121991743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 121991744 . T . PASS END=121991744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 121991745 . A . PASS END=121991748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:26,0 chr2 121991749 . G . PASS END=121991750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 121991751 . T . PASS END=121991770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:25,0 chr2 121992797 . C . PASS END=121992887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,105,1645:0,105,255:40,0 chr2 121995199 . C . PASS END=121995216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,925:0,64,255:26,0 chr2 121995217 . G . PASS END=121995217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 121995218 . C . PASS END=121995218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 121995219 . C . PASS END=121995226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 121995227 . C . PASS END=121995227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 121995228 . T . PASS END=121995234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,83,255:28,0 chr2 121995235 . A . PASS END=121995235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 121995236 . C . PASS END=121995236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 121995237 . C . PASS END=121995237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 121995238 . T . PASS END=121995243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 121995244 . G . PASS END=121995244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 121995245 . G . PASS END=121995250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 121995251 . C . PASS END=121995253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 121995254 . C . PASS END=121995254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:25,0 chr2 121995255 . T . PASS END=121995267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:25:0,69,1035:0,75,255:25,0 chr2 121995268 . G . PASS END=121995268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 121995269 . G . PASS END=121995278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:25,0 chr2 121995279 . G . PASS END=121995279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 121995280 . A . PASS END=121995286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 121995287 . C . PASS END=121995287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 121995288 . A . PASS END=121995292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 121995378 . G . PASS END=121995408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:17,0 chr2 121995409 . T . PASS END=121995409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 121995410 . G . PASS END=121995426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,558:0,45,255:15,0 chr2 121997134 . C . PASS END=121997225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,99,1485:0,116,255:40,0 chr2 121997333 . C . PASS END=121997342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,922:0,62,255:26,0 chr2 121997343 . C . PASS END=121997347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 121997348 . T . PASS END=121997348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 121997349 . G . PASS END=121997351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr2 121997352 . T . PASS END=121997352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:29,0 chr2 121997353 . T . PASS END=121997421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1155:0,80,255:39,0 chr2 121997422 . T . PASS END=121997422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:33,0 chr2 121997423 . G . PASS END=121997451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1205:0,98,255:34,0 chr2 121997452 . A . PASS END=121997460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,87,255:24,0 chr2 121997461 . G . PASS END=121997467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr2 121997468 . C . PASS END=121997472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 121997473 . G . PASS END=121997474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 121997475 . C . PASS END=121997478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 121998199 . C . PASS END=121998205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr2 121998211 . T . PASS END=121998211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 121998212 . C . PASS END=121998221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1117:0,90,255:30,0 chr2 121998222 . T . PASS END=121998222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr2 121998223 . C . PASS END=121998227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1163:0,90,255:30,0 chr2 121998228 . C . PASS END=121998264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr2 121999935 . C . PASS END=122000045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1172:0,83,255:39,0 chr2 122004394 . C . PASS END=122004400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1056:0,87,255:31,0 chr2 122004401 . A . PASS END=122004401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:29,0 chr2 122004402 . C . PASS END=122004522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1125:0,80,255:40,0 chr2 122004523 . G . PASS END=122004539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 122004540 . A . PASS END=122004546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:19,0 chr2 122005740 . C . PASS END=122005842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:34:0,89,1183:0,89,255:40,0 chr2 122005843 . A . PASS END=122005843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:30,0 chr2 122005844 . T . PASS END=122005846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr2 122006558 . C . PASS END=122006561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 122006562 . G . PASS END=122006572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:25,0 chr2 122006573 . G . PASS END=122006573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:23,0 chr2 122006574 . G . PASS END=122006593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr2 122006594 . G . PASS END=122006594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,894:0,47,255:25,0 chr2 122006595 . C . PASS END=122006641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,770:0,62,255:26,0 chr2 122006642 . G . PASS END=122006656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,675:0,44,255:19,0 chr2 122006657 . T . PASS END=122006663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,41,255:13,0 chr2 122007147 . C . PASS END=122007223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:47:0,81,1542:0,81,255:40,2 chr2 122038696 . C . PASS END=122038697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 122038698 . T . PASS END=122038698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 122038699 . G . PASS END=122038703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr2 122038704 . A . PASS END=122038708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 122038709 . G . PASS END=122038709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 122038710 . G . PASS END=122038736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,327:0,30,255:11,0 chr2 122038737 . G . PASS END=122038737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 122038738 . C . PASS END=122038763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 122038764 . T . PASS END=122038764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 122038765 . A . PASS END=122038765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 122038766 . T . PASS END=122038767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 122038768 . G . PASS END=122038768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 122038769 . C . PASS END=122038770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 122038771 . G . PASS END=122038771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 122038772 . G . PASS END=122038816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 122038817 . C . PASS END=122038844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 122038845 . T . PASS END=122038847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 122042624 . C . PASS END=122042625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr2 122042626 . C . PASS END=122042629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,593:0,46,255:20,0 chr2 122042630 . T . PASS END=122042630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 122042631 . A . PASS END=122042632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr2 122042633 . C . PASS END=122042633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 122042634 . T . PASS END=122042634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr2 122042635 . G . PASS END=122042637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:19,0 chr2 122042638 . G . PASS END=122042638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,629:0,8,255:16,0 chr2 122042639 . G . PASS END=122042646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,723:0,49,255:19,0 chr2 122042647 . C . PASS END=122042653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 122042654 . T . PASS END=122042685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,49,255:19,0 chr2 122098437 . T . PASS END=122098442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1109:0,90,255:32,0 chr2 122098443 . G . PASS END=122098443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 122098444 . T . PASS END=122098481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:32:0,85,1119:0,85,255:36,0 chr2 122098482 . G . PASS END=122098482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr2 122098483 . G . PASS END=122098507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1247:0,86,255:33,0 chr2 122098508 . A . PASS END=122098508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:28,0 chr2 122098509 . G . PASS END=122098516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 122098517 . G . PASS END=122098523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1047:0,71,255:26,0 chr2 122104434 . T . PASS END=122104435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 122104436 . A . PASS END=122104436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1270:0,70,255:34,0 chr2 122104437 . A . PASS END=122104719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:30:0,81,981:0,90,255:40,0 chr2 122104720 . T . PASS END=122104725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 122104726 . T . PASS END=122104730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:29:0,48,720:0,87,255:17,0 chr2 122106088 . C . PASS END=122106094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 122106095 . A . PASS END=122106095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr2 122106096 . A . PASS END=122106097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:33,0 chr2 122106098 . C . PASS END=122106098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr2 122106099 . C . PASS END=122106268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:35:0,83,1227:0,83,255:40,0 chr2 122106269 . G . PASS END=122106283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:25,0 chr2 122106284 . G . PASS END=122106294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 122120748 . C . PASS END=122120876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:97:45:0,97,1668:0,97,255:40,0 chr2 122122670 . G . PASS END=122122674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr2 122122675 . T . PASS END=122122675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 122122676 . G . PASS END=122122677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 122122678 . C . PASS END=122122832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1057:0,87,255:40,0 chr2 122122833 . G . PASS END=122122833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 122122834 . C . PASS END=122122837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 122122838 . C . PASS END=122122849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr2 122122850 . G . PASS END=122122860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,62,255:19,0 chr2 122125164 . C . PASS END=122125171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:23,0 chr2 122125172 . A . PASS END=122125172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 122125173 . G . PASS END=122125199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,876:0,61,255:26,0 chr2 122125200 . C . PASS END=122125206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr2 122125207 . C . PASS END=122125215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1007:0,71,255:26,0 chr2 122125216 . C . PASS END=122125222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 122125223 . T . PASS END=122125223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 122125224 . A . PASS END=122125228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1072:0,84,255:29,0 chr2 122125229 . T . PASS END=122125229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:27,0 chr2 122125230 . T . PASS END=122125232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 122125233 . T . PASS END=122125233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 122125234 . G . PASS END=122125244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1116:0,87,255:29,0 chr2 122125245 . A . PASS END=122125286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,939:0,62,255:26,0 chr2 122125287 . C . PASS END=122125291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 122125292 . G . PASS END=122125323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr2 122125324 . A . PASS END=122125325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 122125326 . C . PASS END=122125330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 122125331 . G . PASS END=122125336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,806:0,53,255:19,0 chr2 122125337 . C . PASS END=122125338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 122125339 . G . PASS END=122125349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr2 122125350 . C . PASS END=122125356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 122125357 . A . PASS END=122125361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 122125362 . C . PASS END=122125363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 122125364 . C . PASS END=122125401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr2 122125402 . G . PASS END=122125402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr2 122125403 . G . PASS END=122125403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 122125404 . A . PASS END=122125407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:12,0 chr2 122135075 . A . PASS END=122135225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:90:34:0,90,1350:0,102,255:40,0 chr2 122139784 . C . PASS END=122139801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1092:0,93,255:35,0 chr2 122139802 . C . PASS END=122139802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:33,0 chr2 122139803 . T . PASS END=122139823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1203:0,88,255:36,0 chr2 122139824 . C . PASS END=122139824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1133:0,39,255:32,0 chr2 122139825 . G . PASS END=122139895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,96,255:40,0 chr2 122139896 . A . PASS END=122139900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 122144698 . C . PASS END=122144804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:87:35:0,87,1305:0,92,255:40,0 chr2 122145339 . C . PASS END=122145478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:32:0,84,1260:0,96,255:40,0 chr2 122145479 . C . PASS END=122145482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:26,0 chr2 122148825 . C . PASS END=122148826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1327:0,97,255:35,0 chr2 122148827 . G . PASS END=122148926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:38:0,87,1412:0,87,255:40,0 chr2 122154716 . C . PASS END=122154859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:33:0,96,1264:0,99,255:40,0 chr2 122155898 . C . PASS END=122155976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:76:0,120,1800:0,212,255:40,0 chr2 122159085 . C . PASS END=122159248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:57:0,120,1800:0,158,255:40,1 chr2 122159444 . T . PASS END=122159446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,220,255:40,0 chr2 122160171 . T . PASS END=122160239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:64:0,120,1800:0,192,255:40,0 chr2 122161353 . T . PASS END=122161355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 122161947 . C . PASS END=122162010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,182,255:40,0 chr2 122165047 . C . PASS END=122165291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1174:0,80,255:40,0 chr2 122166600 . C . PASS END=122166623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,221,255:40,0 chr2 122168442 . C . PASS END=122168545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,100,1133:0,100,255:40,0 chr2 122171694 . T . PASS END=122171779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:44:0,93,1568:0,93,255:40,0 chr2 122176198 . C . PASS END=122176305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:38:0,81,1215:0,98,255:40,0 chr2 122182715 . C . PASS END=122182882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:29:0,87,1080:0,87,255:40,0 chr2 122184980 . C . PASS END=122185006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:99:0,120,1800:0,255,255:40,0 chr2 122187649 . G . PASS END=122187660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:32,0 chr2 122187661 . A . PASS END=122187661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 122187662 . A . PASS END=122187670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 122187671 . A . PASS END=122187671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 122187672 . G . PASS END=122187672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 122187673 . C . PASS END=122187675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:29,0 chr2 122187676 . G . PASS END=122187678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 122187679 . T . PASS END=122187679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 122187680 . G . PASS END=122187680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1131:0,90,255:30,0 chr2 122187681 . C . PASS END=122187681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 122187682 . G . PASS END=122187690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1109:0,90,255:31,0 chr2 122187691 . T . PASS END=122187691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr2 122187692 . A . PASS END=122187696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 122187697 . G . PASS END=122187697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1143:0,71,255:30,0 chr2 122187698 . T . PASS END=122187704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:31,0 chr2 122187705 . G . PASS END=122187709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,76,255:26,0 chr2 122187710 . G . PASS END=122187710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 122187711 . T . PASS END=122187711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:28,0 chr2 122187712 . T . PASS END=122187718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 122187719 . A . PASS END=122187730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,811:0,61,255:25,0 chr2 122187731 . T . PASS END=122187731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 122187732 . T . PASS END=122187739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 122187740 . T . PASS END=122187740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 122187741 . G . PASS END=122187742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 122187743 . G . PASS END=122187753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,765:0,50,255:18,0 chr2 122202515 . C . PASS END=122202538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:67:0,120,1800:0,136,255:40,0 chr2 122203025 . C . PASS END=122203072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1426:0,101,255:40,0 chr2 122204913 . C . PASS END=122205072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:36:0,96,1365:0,108,255:40,0 chr2 122205073 . A . PASS END=122205083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:32:0,63,945:0,96,255:22,0 chr2 122205852 . C . PASS END=122205901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,167,255:40,0 chr2 122206529 . T . PASS END=122206672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:39:0,84,1260:0,104,255:40,0 chr2 122206673 . T . PASS END=122206675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:33:0,75,1125:0,99,255:26,0 chr2 122206676 . C . PASS END=122206679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:27,0 chr2 122206680 . G . PASS END=122206680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:26,0 chr2 122206681 . G . PASS END=122206695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:23,0 chr2 122206696 . T . PASS END=122206696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:20,0 chr2 122208489 . T . PASS END=122208566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:45:0,108,1620:0,118,255:40,0 chr2 122209366 . C . PASS END=122209425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,175,255:40,0 chr2 122215263 . C . PASS END=122215333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:58:0,120,1800:0,160,255:40,0 chr2 122216416 . C . PASS END=122216418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 122216419 . A G, 221.10 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,30,0:0,28,0:171:259,174,0,2204,174,2204:255,174,0:0,0:2.2110e+02,1.7110e+02,0.0000e+00,4.5000e+02,2.0587e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,18:0,0,28,30 chr2 122216420 . A . PASS END=122216456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,160,255:40,0 chr2 122216457 . T . PASS END=122216551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:49:0,114,1710:0,142,255:40,0 chr2 122217556 . C . PASS END=122217560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1333:0,95,255:37,0 chr2 122217561 . C . PASS END=122217561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:35,0 chr2 122217562 . G . PASS END=122217692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:37:0,84,1299:0,84,255:40,0 chr2 122217693 . C . PASS END=122217693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:31,2 chr2 122217694 . T . PASS END=122217694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1194:0,36,255:31,2 chr2 122217695 . T . PASS END=122217695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr2 122217696 . T . PASS END=122217701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:32,0 chr2 122218677 . A . PASS END=122218769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,111,1665:0,114,255:40,0 chr2 122220108 . C . PASS END=122220181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:58:0,120,1800:0,174,255:40,0 chr2 122227384 . C . PASS END=122227503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:43:0,84,1260:0,126,255:40,0 chr2 122227504 . C . PASS END=122227536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,739:0,63,255:25,0 chr2 122247849 . C . PASS END=122247864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:82:0,120,1800:0,230,255:40,0 chr2 122260743 . C . PASS END=122260810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:72:0,120,1800:0,209,255:40,0 chr2 122273241 . C . PASS END=122273338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,106,1718:0,106,255:40,0 chr2 122283421 . C . PASS END=122283496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,114,1713:0,114,255:40,0 chr2 122285375 . G . PASS END=122285466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,139,255:40,0 chr2 122286253 . C . PASS END=122286354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1209:0,80,255:40,0 chr2 122286355 . C . PASS END=122286355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr2 122286356 . A . PASS END=122286356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 122287823 . C . PASS END=122287825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:73:27:0,73,1017:0,73,255:28,0 chr2 122287826 . T . PASS END=122287826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 122287827 . G . PASS END=122287827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 122287828 . C . PASS END=122287829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 122287830 . G . PASS END=122287830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 122287831 . A . PASS END=122287879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1133:0,80,255:35,0 chr2 122287880 . T . PASS END=122287901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,925:0,75,255:26,0 chr2 122288460 . A . PASS END=122288461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 122288463 . C . PASS END=122288463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 122288468 . C . PASS END=122288468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 122288471 . G . PASS END=122288471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 122288473 . G . PASS END=122288473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 122288484 . T . PASS END=122288485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 122288492 . G . PASS END=122288492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 122288495 . C . PASS END=122288495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 122288501 . G . PASS END=122288501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 122288503 . G . PASS END=122288503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 122288505 . G . PASS END=122288506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr2 122288508 . C . PASS END=122288508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 122288510 . G . PASS END=122288510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 122288521 . G . PASS END=122288521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 122288566 . G . PASS END=122288566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 122288571 . A . PASS END=122288571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 122288573 . T . PASS END=122288573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 122288579 . G . PASS END=122288579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 122363277 . C . PASS END=122363277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 122363278 . T . PASS END=122363461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1000:0,81,255:40,0 chr2 122363462 . G . PASS END=122363471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:25,0 chr2 122485300 . T . PASS END=122485488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:36:0,84,1260:0,108,255:40,0 chr2 122485864 . C . PASS END=122485932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:51:0,120,1800:0,137,255:40,0 chr2 122486053 . C . PASS END=122486112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:72:0,120,1800:0,178,255:40,0 chr2 122488469 . C . PASS END=122488540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:35:0,83,1253:0,83,255:40,0 chr2 122488541 . T . PASS END=122488541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:67:50:0,67,1452:0,67,255:40,0 chr2 122488542 . C . PASS END=122488665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:32:0,85,1164:0,85,255:40,0 chr2 122488666 . G . PASS END=122488680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:25:0,75,902:0,75,255:25,0 chr2 122489672 . A . PASS END=122489763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:84:51:0,84,1260:0,116,255:40,0 chr2 122489764 . C . PASS END=122489775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:63:29:0,63,945:0,68,255:26,0 chr2 122489776 . C . PASS END=122489780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:19,0 chr2 122493189 . C . PASS END=122493193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,811:0,72,255:24,0 chr2 122493194 . T . PASS END=122493194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:23,0 chr2 122493195 . A . PASS END=122493206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:24:0,60,878:0,60,255:28,0 chr2 122493207 . C . PASS END=122493293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1036:0,81,255:39,0 chr2 122493294 . T . PASS END=122493305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,67,255:24,0 chr2 122493306 . A . PASS END=122493306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:20,0 chr2 122493307 . A . PASS END=122493316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:21,0 chr2 122493317 . G . PASS END=122493317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 122493318 . T . PASS END=122493326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,693:0,63,255:22,0 chr2 122494322 . C . PASS END=122494339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 122494340 . A . PASS END=122494341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 122494342 . C . PASS END=122494360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,613:0,40,255:19,0 chr2 122494361 . A . PASS END=122494363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 122494364 . C . PASS END=122494380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,623:0,43,255:19,0 chr2 122494381 . G . PASS END=122494387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr2 122494388 . C . PASS END=122494391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:19,0 chr2 122494392 . A . PASS END=122494401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,44,255:13,0 chr2 122494402 . C . PASS END=122494402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:12,0 chr2 122494403 . A . PASS END=122494413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 122494414 . A . PASS END=122494414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 122494415 . A . PASS END=122494421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 122494422 . G . PASS END=122494422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,457:0,11,255:13,0 chr2 122494423 . C . PASS END=122494424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 122494425 . A . PASS END=122494426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 122494679 . A . PASS END=122494679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:16,0 chr2 122494680 . C . PASS END=122494681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 122494682 . A . PASS END=122494682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr2 122494683 . G . PASS END=122494685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 122494686 . C . PASS END=122494686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr2 122494687 . G . PASS END=122494692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 122494693 . A . PASS END=122494693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 122494694 . G . PASS END=122494695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr2 122494696 . G . PASS END=122494698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,709:0,63,255:21,0 chr2 122494699 . T . PASS END=122494699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:19,0 chr2 122494700 . G . PASS END=122494700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 122494701 . G . PASS END=122494704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 122494705 . A . PASS END=122494724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,650:0,63,255:21,0 chr2 122494725 . C . PASS END=122494748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:18,0 chr2 122494749 . C . PASS END=122494749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 122494750 . G . PASS END=122494761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 122513356 . A . PASS END=122513391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr2 122513392 . T . PASS END=122513392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 122513393 . T . PASS END=122513426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,830:0,63,255:25,0 chr2 122513427 . C . PASS END=122513443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,54,255:18,0 chr2 122513444 . T . PASS END=122513444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr2 122513445 . C . PASS END=122513448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr2 122513449 . T . PASS END=122513457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 122513458 . C . PASS END=122513458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 122513459 . A . PASS END=122513463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr2 122514816 . G . PASS END=122515010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:50:0,120,1800:0,134,255:40,2 chr2 122516286 . T . PASS END=122516382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:64:0,120,1800:0,180,255:40,0 chr2 122518985 . A . PASS END=122519100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:49:0,104,1800:0,104,255:40,0 chr2 122520581 . T . PASS END=122520660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:48:0,96,1440:0,102,255:40,0 chr2 122522710 . T . PASS END=122522712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 122522713 . A . PASS END=122522713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 122522714 . G . PASS END=122522714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 122522715 . G . PASS END=122522715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 122522716 . C . PASS END=122522859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:80:28:0,80,1134:0,80,255:40,0 chr2 122522860 . G . PASS END=122522860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:12:55:0,12,1402:0,12,255:40,0 chr2 122522861 . T . PASS END=122522943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,101,1386:0,101,255:40,0 chr2 124783228 . A . PASS END=124783309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:42:0,93,1496:0,93,255:40,0 chr2 124979282 . A . PASS END=124979286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:38,0 chr2 124979287 . T . PASS END=124979287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1280:0,48,255:37,0 chr2 124979288 . G . PASS END=124979386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:39:0,85,1328:0,85,255:40,0 chr2 124999777 . G . PASS END=124999970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:42:0,108,1620:0,112,255:40,0 chr2 125175020 . A . PASS END=125175167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:31:0,86,1180:0,86,255:40,0 chr2 125192061 . A . PASS END=125192066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 125192067 . A . PASS END=125192067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 125192068 . T C, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,21,0:0,6,0:78:166,81,0,1047,81,1047:255,81,0:0,0:1.2826e+02,7.8263e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,8:0,0,15,12 chr2 125192069 . G . PASS END=125192069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 125192070 . T . PASS END=125192070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 125192071 . T . PASS END=125192078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1045:0,84,255:29,0 chr2 125192079 . T . PASS END=125192079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 125192080 . T . PASS END=125192105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:39,0 chr2 125192106 . G . PASS END=125192161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1444:0,104,255:40,0 chr2 125192162 . A . PASS END=125192162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1355:0,79,255:40,0 chr2 125192163 . G . PASS END=125192257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:31:0,81,1215:0,93,255:40,0 chr2 125192258 . A . PASS END=125192258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1062:0,54,255:27,0 chr2 125192259 . A . PASS END=125192261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 125192262 . T . PASS END=125192264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 125192266 . T . PASS END=125192266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 125204330 . G . PASS END=125204330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 125204331 . T . PASS END=125204331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:21,0 chr2 125204332 . G . PASS END=125204337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,853:0,66,255:22,0 chr2 125204338 . A . PASS END=125204338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 125204339 . A . PASS END=125204350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr2 125204351 . G . PASS END=125204359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 125204360 . T . PASS END=125204360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 125204361 . G . PASS END=125204505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:29:0,84,1241:0,87,255:40,0 chr2 125204506 . G . PASS END=125204506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 125204507 . A . PASS END=125204509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:27,0 chr2 125204510 . A . PASS END=125204514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 125232316 . C . PASS END=125232459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:98:50:0,98,1622:0,98,255:40,2 chr2 125261869 . G . PASS END=125261875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 125261876 . T . PASS END=125261876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:16,0 chr2 125261877 . C . PASS END=125261890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,568:0,40,255:19,0 chr2 125261891 . C . PASS END=125261892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 125261893 . G . PASS END=125261893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 125261894 . A . PASS END=125261895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr2 125261896 . C . PASS END=125261897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:24:0,44,853:0,44,255:24,0 chr2 125261898 . A . PASS END=125261902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,902:0,75,255:26,0 chr2 125261903 . T . PASS END=125261903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 125261904 . T . PASS END=125261904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 125261905 . G . PASS END=125261916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 125261917 . T . PASS END=125261917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 125261918 . T . PASS END=125261918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 125261919 . T . PASS END=125261919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 125261920 . G . PASS END=125261921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 125261922 . C . PASS END=125261923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1086:0,74,255:28,0 chr2 125261924 . A . PASS END=125261934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 125261935 . A . PASS END=125261936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 125261937 . C . PASS END=125261940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 125261941 . T . PASS END=125261942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 125261943 . G . PASS END=125261954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1216:0,83,255:30,0 chr2 125261955 . C . PASS END=125261955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 125261956 . A . PASS END=125261984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:31,0 chr2 125261985 . T . PASS END=125261985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr2 125261986 . T . PASS END=125261993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1123:0,90,255:31,0 chr2 125261994 . T . PASS END=125261994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 125261995 . C . PASS END=125262000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 125262001 . T . PASS END=125262001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 125262002 . G . PASS END=125262081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,91,255:35,0 chr2 125262082 . C . PASS END=125262082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr2 125262083 . T . PASS END=125262087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1155:0,90,255:32,0 chr2 125262088 . C . PASS END=125262088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:30,0 chr2 125262089 . T . PASS END=125262092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 125262093 . G . PASS END=125262093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:30,0 chr2 125262094 . A . PASS END=125262126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:31,0 chr2 125262127 . C . PASS END=125262127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 125262128 . T . PASS END=125262129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 125262130 . A . PASS END=125262133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 125281880 . G . PASS END=125281888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:34,0 chr2 125281889 . T . PASS END=125281889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1111:0,69,255:30,0 chr2 125281890 . G . PASS END=125282020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:30:0,80,1147:0,80,255:40,0 chr2 125282021 . A . PASS END=125282021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 125282022 . T . PASS END=125282028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1057:0,87,255:29,0 chr2 125282029 . G . PASS END=125282029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 125284862 . G . PASS END=125285033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:81:38:0,81,1406:0,81,255:40,0 chr2 125320794 . G . PASS END=125320900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,107,1383:0,107,255:40,0 chr2 125367378 . C . PASS END=125367494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1108:0,86,255:40,0 chr2 125367495 . C . PASS END=125367497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 125405335 . A . PASS END=125405341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr2 125405342 . G . PASS END=125405501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,927:0,81,255:40,0 chr2 125405502 . C . PASS END=125405509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:25,0 chr2 125405510 . G . PASS END=125405514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:27:0,57,855:0,64,255:19,0 chr2 125405515 . C . PASS END=125405517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 125405518 . G . PASS END=125405535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,712:0,44,255:19,0 chr2 125504806 . A . PASS END=125504806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:32,0 chr2 125504807 . T . PASS END=125504807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:32,0 chr2 125504808 . G . PASS END=125504954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1243:0,92,255:40,0 chr2 125504955 . G . PASS END=125504962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:24,0 chr2 125521249 . G . PASS END=125521275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:33:0,98,1157:0,98,255:38,0 chr2 125521276 . C . PASS END=125521276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr2 125521277 . A . PASS END=125521376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,101,1402:0,101,255:40,0 chr2 125521554 . G . PASS END=125521568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1472:0,107,255:37,0 chr2 125521569 . C . PASS END=125521569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:35,0 chr2 125521570 . C . PASS END=125521724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:36:0,90,1314:0,90,255:40,0 chr2 125530376 . C . PASS END=125530380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,615:0,43,255:20,0 chr2 125530381 . T . PASS END=125530382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 125530383 . A . PASS END=125530383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:15:21:0,15,576:0,15,255:19,0 chr2 125530384 . G . PASS END=125530384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 125530385 . A . PASS END=125530385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,760:0,66,255:22,0 chr2 125530386 . G . PASS END=125530386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 125530387 . A . PASS END=125530387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 125530388 . T . PASS END=125530388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 125530389 . C . PASS END=125530390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,791:0,66,255:22,0 chr2 125530391 . C . PASS END=125530391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:22,0 chr2 125530392 . C . PASS END=125530394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,705:0,68,255:23,0 chr2 125530395 . T . PASS END=125530395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:20,0 chr2 125530396 . G . PASS END=125530396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 125530397 . C . PASS END=125530397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 125530398 . C . PASS END=125530406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,909:0,69,255:25,0 chr2 125530407 . T . PASS END=125530407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 125530408 . G . PASS END=125530409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 125530410 . G . PASS END=125530411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 125530412 . A . PASS END=125530416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 125530417 . C . PASS END=125530421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 125530422 . G . PASS END=125530422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 125530423 . G . PASS END=125530426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 125530427 . T . PASS END=125530427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:30,0 chr2 125530428 . T . PASS END=125530430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 125530431 . A . PASS END=125530431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 125530432 . G . PASS END=125530433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1140:0,93,255:31,0 chr2 125530434 . C . PASS END=125530434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 125530435 . C . PASS END=125530570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:83:31:0,83,1105:0,83,255:40,0 chr2 125530571 . A . PASS END=125530571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:29,0 chr2 125530572 . G . PASS END=125530574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1194:0,86,255:30,0 chr2 125530575 . G . PASS END=125530575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:28,0 chr2 125530576 . A . PASS END=125530580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:31:0,86,1202:0,86,255:30,0 chr2 125530581 . C . PASS END=125530581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 125530582 . C . PASS END=125530583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 125530584 . G . PASS END=125530585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 125530586 . T . PASS END=125530588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,92,255:27,0 chr2 125530589 . T . PASS END=125530589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr2 125530590 . T . PASS END=125530594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 125547479 . G . PASS END=125547486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 125547487 . T . PASS END=125547487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 125547488 . C . PASS END=125547497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1048:0,87,255:30,0 chr2 125547498 . G . PASS END=125547498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 125547499 . A . PASS END=125547608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:30:0,86,1109:0,86,255:40,0 chr2 125547609 . C . PASS END=125547609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:34,0 chr2 125547610 . A . PASS END=125547688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1149:0,81,255:40,0 chr2 125547689 . C . PASS END=125547718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1008:0,78,255:26,0 chr2 125555673 . A . PASS END=125555897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:90:32:0,90,1225:0,90,255:40,0 chr2 125622883 . G . PASS END=125622883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 125622884 . A . PASS END=125622884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1023:0,51,255:27,0 chr2 125622885 . A . PASS END=125622999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:30:0,87,1286:0,90,255:40,0 chr2 125623000 . A . PASS END=125623000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1344:0,71,255:34,0 chr2 125623001 . G . PASS END=125623013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:37:0,101,1418:0,101,255:36,0 chr2 125627252 . A . PASS END=125627339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,159,255:40,0 chr2 125660459 . A . PASS END=125660618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1093:0,80,255:40,0 chr2 125660619 . C . PASS END=125660619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:34,0 chr2 125660620 . T . PASS END=125660661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:36,0 chr2 125660662 . G . PASS END=125660677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,65,255:26,0 chr2 125669044 . A . PASS END=125669115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:61:0,120,1800:0,151,255:40,0 chr2 125671669 . G . PASS END=125671687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1125:0,80,255:40,0 chr2 125671688 . A . PASS END=125671688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1216:0,76,255:39,0 chr2 125671689 . T . PASS END=125671865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:86:33:0,86,1075:0,86,255:40,0 chr2 127413840 . A . PASS END=127413842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1074:0,93,255:31,0 chr2 127413843 . T . PASS END=127413843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 127413844 . G . PASS END=127413844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 127413845 . G . PASS END=127413845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:29,0 chr2 127413846 . T . PASS END=127413846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1045:0,63,255:29,0 chr2 127413847 . C . PASS END=127413853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1115:0,80,255:30,0 chr2 127413854 . A . PASS END=127413856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:31:0,60,1003:0,60,255:31,0 chr2 127413857 . C . PASS END=127413864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1143:0,85,255:33,0 chr2 127413865 . G . PASS END=127413866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1111:0,60,255:31,0 chr2 127413867 . A . PASS END=127413878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1194:0,83,255:31,0 chr2 127413879 . C . PASS END=127413879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 127413880 . T . PASS END=127413888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 127440420 . A . PASS END=127440423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 127440424 . T . PASS END=127440424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 127440425 . G . PASS END=127440429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 127440430 . A . PASS END=127440430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 127440431 . G . PASS END=127440450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:22,0 chr2 127447827 . A . PASS END=127447827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 127447831 . A . PASS END=127447887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:38:0,84,1429:0,84,255:40,0 chr2 127451436 . A . PASS END=127451436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1227:0,99,255:33,0 chr2 127451440 . A . PASS END=127451523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1280:0,97,255:40,0 chr2 127453522 . G . PASS END=127453548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1008:0,80,255:33,0 chr2 127453549 . T . PASS END=127453549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:32,0 chr2 127453550 . A . PASS END=127453626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:34:0,88,1227:0,88,255:40,0 chr2 127453627 . C . PASS END=127453663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,105,1575:0,116,255:40,0 chr2 127453664 . A C, 49.79 PASS DP=40;MQ=249.85;MQRankSum=4.821;ReadPosRankSum=2.221;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,19,0:0.475,0.000:40:11,10,0:10,9,0:48:85,0,50,670,735,1405:255,0,255:18,0:4.9792e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,11,7,12:12,9,12,7 chr2 127453665 . G . PASS END=127453681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,93,255:34,0 chr2 127453682 . T . PASS END=127453683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:24,0 chr2 127453684 . C . PASS END=127453684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:24,0 chr2 127453685 . T . PASS END=127453701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr2 127453702 . A . PASS END=127453702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 127453703 . G . PASS END=127453703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 127453704 . G . PASS END=127453704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 127453705 . A . PASS END=127453713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 127453714 . T . PASS END=127453718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 127656495 . A . PASS END=127656693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:41:0,99,1427:0,99,255:40,0 chr2 127656793 . A . PASS END=127657003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1800:0,143,255:40,0 chr2 127657099 . A . PASS END=127657183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,135,255:40,0 chr2 127657184 . G . PASS END=127657188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:65:0,120,1800:0,195,255:40,0 chr2 127657375 . C . PASS END=127657404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,931:0,65,255:26,0 chr2 127657405 . C . PASS END=127657409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 127657410 . A . PASS END=127657429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,70,255:26,0 chr2 127657512 . A . PASS END=127657518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,933:0,67,255:26,0 chr2 127657519 . G . PASS END=127657526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:28,0 chr2 127657527 . T . PASS END=127657527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr2 127657528 . G . PASS END=127657529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 127657530 . A . PASS END=127657531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:45:28:0,45,886:0,45,255:27,0 chr2 127657532 . G . PASS END=127657538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,979:0,84,255:28,0 chr2 127657539 . G . PASS END=127657539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:27,0 chr2 127657540 . C . PASS END=127657542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 127657543 . T . PASS END=127657543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 127657544 . G . PASS END=127657547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:28,0 chr2 127657548 . A . PASS END=127657548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 127657549 . C . PASS END=127657556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:32,0 chr2 127657557 . C . PASS END=127657557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1031:0,49,255:25,0 chr2 127657558 . T . PASS END=127657559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,83,255:27,0 chr2 127657560 . A . PASS END=127657560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1048:0,69,255:27,0 chr2 127657561 . C . PASS END=127657565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1164:0,83,255:28,0 chr2 127657566 . T . PASS END=127657566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:27,0 chr2 127657567 . C . PASS END=127657575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 127657576 . T . PASS END=127657576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 127657577 . G . PASS END=127657583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 127657584 . C . PASS END=127657588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 127657589 . T . PASS END=127657592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 127657593 . C . PASS END=127657595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 127658636 . A . PASS END=127658640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,77,255:26,0 chr2 127658641 . T A, 48.25 PASS DP=27;MQ=250.00;MQRankSum=4.318;ReadPosRankSum=3.627;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,11,0:0.407,0.000:27:9,6,0:7,5,0:47:83,0,50,377,502,880:255,0,255:15,0:4.8252e+01,8.6719e-05,5.3000e+01,3.7738e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,4,7,4:9,7,6,5 chr2 127658642 . G . PASS END=127658642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 127658643 . C . PASS END=127658678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:27:0,81,994:0,81,255:39,0 chr2 127658679 . A . PASS END=127658691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1411:0,104,255:38,0 chr2 127658786 . C . PASS END=127658858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,102,1574:0,102,255:40,0 chr2 127658941 . A . PASS END=127659013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:61:0,120,1800:0,158,255:40,0 chr2 127659445 . C . PASS END=127659540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:29:0,83,1078:0,83,255:40,0 chr2 127659541 . T . PASS END=127659579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 127659580 . G . PASS END=127659593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr2 127805601 . C . PASS END=127805601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 127805622 . A . LowGQ END=127805622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,7:71:0:71:0,0,2071:58,0,255:40,11 chr2 127805632 . T . PASS END=127805632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 127805653 . C . PASS END=127805653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 127805684 . G . PASS END=127805684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,151,255:40,0 chr2 127805689 . C . PASS END=127805689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,150,255:40,0 chr2 127805799 . T . PASS END=127805799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 127805801 . G . PASS END=127805801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 127805855 . C . PASS END=127805855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 127805859 . A . PASS END=127805859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 127805888 . C . PASS END=127805888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 127805908 . G . PASS END=127805908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 127806020 . G . PASS END=127806020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 127806047 . C . PASS END=127806047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 127806080 . G . PASS END=127806080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 127806101 . G . PASS END=127806186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:31:0,86,1156:0,86,255:38,0 chr2 127806187 . A . PASS END=127806187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 127806188 . C . PASS END=127806192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:28,0 chr2 127806193 . A . PASS END=127806193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:27,0 chr2 127806194 . T . PASS END=127806199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 127806200 . A . PASS END=127806209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 127806216 . G . PASS END=127806216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 127807997 . C . PASS END=127808001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,858:0,72,255:25,0 chr2 127808002 . C . PASS END=127808007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 127808008 . G . PASS END=127808008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 127808009 . G . PASS END=127808015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 127808016 . A . PASS END=127808016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 127808017 . A . PASS END=127808077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:28:0,83,1078:0,83,255:33,0 chr2 127808078 . G . PASS END=127808078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:28,0 chr2 127808079 . T . PASS END=127808079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 127808080 . A . PASS END=127808096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,73,255:26,0 chr2 127808097 . A . PASS END=127808098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 127808378 . C . PASS END=127808390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,947:0,62,255:26,0 chr2 127808391 . C . PASS END=127808391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 127808392 . C . PASS END=127808395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 127808396 . G . PASS END=127808398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 127808399 . C . PASS END=127808400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr2 127808401 . G . PASS END=127808482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1210:0,86,255:38,0 chr2 127808483 . A . PASS END=127808485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:30:0,77,1139:0,77,255:26,0 chr2 127808486 . G . PASS END=127808488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 127808491 . G . PASS END=127808491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 127808730 . G . PASS END=127808745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 127808746 . G . PASS END=127808750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 127808751 . C . PASS END=127808755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 127808756 . C . PASS END=127808759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 127808760 . T . PASS END=127808766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 127808767 . T . PASS END=127808767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 127808768 . G . PASS END=127808804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 127808805 . C . PASS END=127808805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 127808806 . G . PASS END=127808806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 127808807 . A . PASS END=127808807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 127808808 . G . PASS END=127808819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:11,0 chr2 127809830 . C . PASS END=127809851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 127809852 . C . PASS END=127809902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr2 127809903 . C . PASS END=127809904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 127809905 . C . PASS END=127809922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 127809923 . C . PASS END=127809923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 127809924 . T . PASS END=127809935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,604:0,48,255:16,0 chr2 127809936 . G . PASS END=127809938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 127810987 . G . PASS END=127810987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 127810998 . C . PASS END=127811021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1141:0,82,255:32,0 chr2 127811481 . C . PASS END=127811519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:12,0 chr2 127811520 . G . PASS END=127811524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 127811525 . G . PASS END=127811532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 127811533 . T . PASS END=127811533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 127811534 . C . PASS END=127811537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 127811538 . G . PASS END=127811552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 127811553 . A . PASS END=127811573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,459:0,39,255:13,0 chr2 127811574 . C . PASS END=127811574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 127811575 . C . PASS END=127811581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 127811582 . C . PASS END=127811582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr2 127811583 . C . PASS END=127811588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,456:0,39,255:13,0 chr2 127811590 . T . PASS END=127811592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,435:0,39,255:13,0 chr2 127811595 . A . PASS END=127811595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 127815040 . G . PASS END=127815040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 127815049 . C . PASS END=127815055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,662:0,46,255:19,0 chr2 127815056 . G . PASS END=127815065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,853:0,66,255:26,0 chr2 127815066 . C . PASS END=127815070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 127815071 . A . PASS END=127815071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 127815072 . T . PASS END=127815086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 127815087 . T . PASS END=127815087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 127815088 . G . PASS END=127815116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,935:0,87,255:30,0 chr2 127815117 . G . PASS END=127815117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 127815118 . C . PASS END=127815119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 127815120 . T . PASS END=127815133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,77,255:26,0 chr2 127815134 . G . PASS END=127815143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,58,255:19,0 chr2 127815144 . T . PASS END=127815147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr2 127815148 . A . PASS END=127815148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 127815149 . G . PASS END=127815149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 127815150 . G . PASS END=127815150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:19,0 chr2 127815151 . C . PASS END=127815151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:18,0 chr2 127815152 . G . PASS END=127815172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr2 127815173 . C . PASS END=127815177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 127815183 . G . PASS END=127815183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 127815188 . G . PASS END=127815188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 127815190 . G . PASS END=127815190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 127816585 . A . PASS END=127816585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 127816587 . C . PASS END=127816594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 127816595 . G . PASS END=127816631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 127816632 . G A, 50.00 PASS DP=8;MQ=250.00;MQRankSum=2.017;ReadPosRankSum=2.017;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,4,0:0.500,0.000:8:2,3,0:2,1,0:48:85,0,50,143,143,286:131,0,109:4,0:5.0000e+01,6.5233e-05,5.3000e+01,1.4306e+02,1.7787e+02,2.8916e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,2,2:1,3,3,1 chr2 127816633 . G . PASS END=127816646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,302:0,24,255:8,0 chr2 127816647 . G . PASS END=127816647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 127816648 . T . PASS END=127816663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:8,0 chr2 127816664 . C . PASS END=127816664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 127816665 . G . PASS END=127816669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 127816670 . T . PASS END=127816688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 127816689 . T . PASS END=127816689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 127816690 . G . PASS END=127816698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 127816699 . G . PASS END=127816699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 127816700 . G . PASS END=127816701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 127816702 . C . PASS END=127816702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 127816703 . T . PASS END=127816703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 127816704 . C . PASS END=127816709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:8:0,11,225:0,11,255:5,0 chr2 127816710 . C . PASS END=127816710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr2 127816711 . C . PASS END=127816715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,235:6,0 chr2 127816716 . T . LowGQ END=127816716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,204:6,0 chr2 127816717 . G . PASS END=127816725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,202:6,0 chr2 127816726 . T . PASS END=127816731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:1:5:0,1,90:0,1,149:3,0 chr2 127818172 . C . PASS END=127818203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,99,1482:0,99,255:40,0 chr2 127818204 . T . PASS END=127818204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:26:44:0,26,1135:0,26,255:36,0 chr2 127818205 . T . PASS END=127818216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 127819687 . G . PASS END=127819687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:24,0 chr2 127819691 . C . PASS END=127819691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr2 127819692 . T . PASS END=127819697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 127819698 . G . PASS END=127819698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 127819699 . G . PASS END=127819704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 127819705 . G . PASS END=127819705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 127819706 . A . PASS END=127819712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 127819713 . A . PASS END=127819713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,994:0,56,255:27,0 chr2 127819714 . G . PASS END=127819717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 127819718 . T . PASS END=127819722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:26,0 chr2 127819723 . C . PASS END=127819723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr2 127819724 . C . PASS END=127819733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 127819734 . T . PASS END=127819738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 127819739 . A . PASS END=127819739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 127819740 . G . PASS END=127819743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 127819744 . G . PASS END=127819744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 127819745 . A . PASS END=127819751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 127819752 . C . PASS END=127819753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,915:0,67,255:26,0 chr2 127819754 . T . PASS END=127819754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 127819755 . C . PASS END=127819755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 127819756 . A . PASS END=127819756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:38:29:0,38,935:0,38,255:25,0 chr2 127819757 . T . PASS END=127819757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 127819758 . T . PASS END=127819759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 127819760 . A . PASS END=127819760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:25,0 chr2 127819761 . G . PASS END=127819761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 127819762 . G . PASS END=127819762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 127819763 . T . PASS END=127819763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 127819764 . T . PASS END=127819764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:26,0 chr2 127819765 . C . PASS END=127819765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,897:0,53,255:26,0 chr2 127819766 . T . PASS END=127819767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 127819768 . G . PASS END=127819768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr2 127819769 . T . PASS END=127819771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 127819772 . A . PASS END=127819772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 127819773 . G . PASS END=127819773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 127821147 . C . PASS END=127821147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 127821148 . T . PASS END=127821148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 127821149 . T . PASS END=127821154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 127821155 . T . PASS END=127821155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr2 127821156 . C . PASS END=127821176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr2 127821177 . C . PASS END=127821181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 127821182 . C . PASS END=127821189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:29,0 chr2 127821190 . C . PASS END=127821191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr2 127821192 . C . PASS END=127821222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 127821494 . C . PASS END=127821494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 127821500 . G . PASS END=127821500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 127821509 . C . PASS END=127821533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:22:0,65,853:0,65,255:26,0 chr2 127821534 . C . PASS END=127821536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 127821537 . G . PASS END=127821578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:29,0 chr2 127821579 . T . PASS END=127821594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,984:0,65,255:26,0 chr2 127821599 . G . PASS END=127821599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 127825739 . C . PASS END=127825752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:26,0 chr2 127825753 . G . PASS END=127825772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,934:0,84,255:29,0 chr2 127825773 . T . PASS END=127825814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,922:0,62,255:26,0 chr2 127825815 . T . PASS END=127825815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 127825816 . C . PASS END=127825826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 127825827 . A . PASS END=127825827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,670:0,35,255:19,0 chr2 127825828 . C . PASS END=127825831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 127826496 . T . PASS END=127826496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 127826500 . C . PASS END=127826527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:23,0 chr2 127826528 . T . PASS END=127826528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr2 127826529 . T . PASS END=127826532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 127826533 . A G, 45.30 PASS DP=23;MQ=250.00;MQRankSum=3.841;ReadPosRankSum=2.872;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,8,0:0.348,0.000:23:8,0,0:7,8,0:44:80,0,47,180,180,180:233,0,255:15,0:4.5297e+01,1.7163e-04,5.0000e+01,1.8007e+02,2.1484e+02,1.8308e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,6,4,4:10,5,4,4 chr2 127826534 . G . PASS END=127826544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:26,0 chr2 127826545 . C . PASS END=127826546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr2 127826547 . C . PASS END=127826547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 127826548 . G . PASS END=127826562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:29,0 chr2 127826563 . A . PASS END=127826570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 127826571 . A . PASS END=127826574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,81,255:24,0 chr2 127826575 . C . PASS END=127826575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 127826576 . A . PASS END=127826593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 127826594 . T . PASS END=127826594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 127826595 . T . PASS END=127826607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,884:0,69,255:23,0 chr2 127827571 . C . PASS END=127827584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,997:0,90,255:30,0 chr2 127827585 . A . PASS END=127827585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 127827586 . C . PASS END=127827588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 127827589 . G . PASS END=127827589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 127827590 . C . PASS END=127827620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1133:0,80,255:33,0 chr2 127827621 . G . PASS END=127827621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:29,0 chr2 127827622 . G . PASS END=127827643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr2 127827644 . T . PASS END=127827663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr2 127827664 . G . PASS END=127827664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,883:0,31,255:21,0 chr2 127827665 . T . PASS END=127827666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:22,0 chr2 127828123 . G . PASS END=127828123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 127828126 . C . PASS END=127828126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 127828129 . C . PASS END=127828135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 127828136 . A . PASS END=127828140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:29,0 chr2 127828141 . G . PASS END=127828142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,883:0,70,255:28,0 chr2 127828143 . T . PASS END=127828157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 127828158 . C . PASS END=127828158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 127828159 . G . PASS END=127828164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 127828165 . A . PASS END=127828165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 127828166 . T . PASS END=127828202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1105:0,82,255:34,0 chr2 127828203 . T . PASS END=127828203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1025:0,62,255:27,0 chr2 127828204 . C . PASS END=127828213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 127828214 . T . PASS END=127828215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 127828216 . G . PASS END=127828220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 127828221 . T . PASS END=127828223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 127828338 . C . PASS END=127828340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,822:0,80,255:27,0 chr2 127828341 . T . PASS END=127828341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 127828342 . G . PASS END=127828343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 127828344 . C . PASS END=127828344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 127828345 . G . PASS END=127828345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr2 127828346 . G . PASS END=127828347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 127828348 . G . PASS END=127828348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 127828349 . G . PASS END=127828349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 127828350 . C . PASS END=127828357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 127828358 . G . PASS END=127828392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,879:0,61,255:26,0 chr2 127834196 . A . PASS END=127834196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr2 127834202 . C . PASS END=127834282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1215:0,83,255:40,0 chr2 127834287 . C . PASS END=127834287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 127839408 . C . PASS END=127839419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1395:0,98,255:34,0 chr2 127841165 . C . PASS END=127841167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,166,255:40,0 chr2 127864427 . C . PASS END=127864427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 127864436 . C . PASS END=127864449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr2 127864450 . G . PASS END=127864450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 127864451 . G . PASS END=127864460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr2 127864461 . T . PASS END=127864461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 127864462 . T . PASS END=127864482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,872:0,75,255:25,0 chr2 127864483 . T . PASS END=127864483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 127864484 . T . PASS END=127864485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 127864486 . C . PASS END=127864486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 127864487 . C . PASS END=127864487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 127864488 . G . PASS END=127864488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 127864489 . C . PASS END=127864493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr2 127864494 . A . PASS END=127864494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 127864495 . C . PASS END=127864501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 127864502 . A . PASS END=127864503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:16,0 chr2 127864504 . T . PASS END=127864504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:15,0 chr2 127864505 . G . PASS END=127864519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:16:0,44,604:0,44,255:16,0 chr2 127864581 . C . PASS END=127864581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 127864624 . C . PASS END=127864624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 127864632 . G . PASS END=127864632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 127864665 . G . PASS END=127864665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 127864682 . A . PASS END=127864682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 127864692 . G . PASS END=127864692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 127864711 . C . PASS END=127864711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 127864716 . G . PASS END=127864716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 127864733 . A . PASS END=127864733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr2 127864791 . C . PASS END=127864791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 127864833 . C . PASS END=127864833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 127864885 . G . PASS END=127864885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,255:4,0 chr2 127944847 . T . PASS END=127944859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr2 127944860 . A . PASS END=127944860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 127944861 . C . PASS END=127944865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 127944866 . C . PASS END=127944866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 127944867 . G . PASS END=127944868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 127944869 . A . PASS END=127944869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 127944870 . C . PASS END=127944880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:24,0 chr2 127944881 . C . PASS END=127944881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 127944882 . C . PASS END=127944884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 127944885 . C . PASS END=127944886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 127944887 . G . PASS END=127944887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 127944888 . G . PASS END=127944888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 127944889 . C . PASS END=127944902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 127944903 . G . PASS END=127944963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,854:0,65,255:26,0 chr2 127950670 . C . PASS END=127950688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr2 127950689 . A . PASS END=127950695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 127950696 . G . PASS END=127950696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 127950697 . T . PASS END=127950704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 127950705 . T . PASS END=127950706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:71:29:0,71,1031:0,71,255:30,0 chr2 127950707 . C . PASS END=127950873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:32:0,93,1095:0,96,255:40,0 chr2 127951046 . C . PASS END=127951232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:36:0,82,1357:0,82,255:40,0 chr2 127951365 . G . PASS END=127951443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,103,1530:0,103,255:40,0 chr2 127952911 . C . PASS END=127952924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1086:0,87,255:31,0 chr2 127952925 . A . PASS END=127952925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 127952926 . A . PASS END=127953016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:31:0,93,1134:0,93,255:40,0 chr2 127953017 . T . PASS END=127953035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1031:0,80,255:32,0 chr2 127953036 . C . PASS END=127953045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr2 127953046 . A . PASS END=127953053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:27:0,45,675:0,81,255:19,0 chr2 127953054 . A C, 50.00 PASS DP=22;MQ=250.00;MQRankSum=3.923;ReadPosRankSum=2.407;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,12,0:0.545,0.000:22:6,5,0:4,7,0:48:85,0,50,426,358,784:255,0,255:6,0:5.0000e+01,6.7304e-05,5.2606e+01,4.2605e+02,3.9235e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,5,7:6,4,8,4 chr2 127953055 . G . PASS END=127953055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:14,0 chr2 127953056 . T . PASS END=127953061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr2 127953062 . A . PASS END=127953068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 127953069 . G . PASS END=127953077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:12:0,24,360:0,26,255:9,0 chr2 127956952 . C . PASS END=127956954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 127956955 . G . PASS END=127956955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr2 127956956 . T . PASS END=127956958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 127956959 . A . PASS END=127956961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr2 127956962 . C . PASS END=127956962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr2 127956963 . C . PASS END=127956982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,738:0,60,255:23,0 chr2 127956983 . A . PASS END=127956983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 127956984 . C . PASS END=127957016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,884:0,62,255:26,0 chr2 127957017 . G . PASS END=127957022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 127957023 . G . PASS END=127957032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,992:0,68,255:26,0 chr2 127957033 . T . PASS END=127957049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1070:0,87,255:30,0 chr2 127957050 . T . PASS END=127957059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 127957060 . G . PASS END=127957060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:24,0 chr2 127957061 . C . PASS END=127957070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,939:0,78,255:26,0 chr2 127957071 . T . PASS END=127957071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,840:0,39,255:25,0 chr2 127957072 . T . PASS END=127957093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:25,0 chr2 127957094 . T . PASS END=127957094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 127957095 . T . PASS END=127957098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 127957099 . G . PASS END=127957115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 127958698 . T . PASS END=127958698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 127958699 . G . PASS END=127958700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 127958701 . A . PASS END=127958701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 127958702 . T . PASS END=127958704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,627:0,40,255:19,0 chr2 127958705 . G . PASS END=127958723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,768:0,63,255:25,0 chr2 127958724 . C . PASS END=127958728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 127958729 . G . PASS END=127958735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 127958736 . C . PASS END=127958779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1155:0,86,255:37,0 chr2 127958780 . G . PASS END=127958780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:34,0 chr2 127958781 . C . PASS END=127958783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1264:0,92,255:35,0 chr2 127958784 . G . PASS END=127958784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1223:0,75,255:32,0 chr2 127958785 . C . PASS END=127958793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1260:0,92,255:34,0 chr2 127958794 . A . PASS END=127958794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:30,0 chr2 127958795 . G . PASS END=127958795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 127958796 . G . PASS END=127958796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1263:0,53,255:32,0 chr2 127958797 . T . PASS END=127958797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1274:0,70,255:33,0 chr2 127958798 . C . PASS END=127958798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:48:38:0,48,1168:0,48,255:31,0 chr2 127958799 . T . PASS END=127958800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1335:0,97,255:35,0 chr2 127958801 . G . PASS END=127958801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1190:0,78,255:31,0 chr2 127958802 . A . PASS END=127958807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1264:0,92,255:34,0 chr2 127958808 . C . PASS END=127958809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1152:0,78,255:33,0 chr2 127958810 . A . PASS END=127958813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1180:0,94,255:36,0 chr2 127958814 . A . PASS END=127958814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1192:0,66,255:34,0 chr2 127958815 . T . PASS END=127958815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 127958816 . G . PASS END=127958816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1143:0,75,255:32,0 chr2 127958817 . A . PASS END=127958819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:36:0,94,1282:0,94,255:34,0 chr2 127958820 . T . PASS END=127958820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:31:37:0,31,1116:0,31,255:30,0 chr2 127958821 . C . PASS END=127958822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 127958823 . A . PASS END=127958823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1105:0,61,255:31,0 chr2 127958824 . G . PASS END=127958826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1221:0,94,255:34,0 chr2 127958827 . C . PASS END=127958827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1216:0,58,255:31,0 chr2 127958828 . C . PASS END=127958831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr2 127958832 . A . PASS END=127958832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:30,0 chr2 127958833 . T . PASS END=127958835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1151:0,89,255:31,0 chr2 127958836 . A . PASS END=127958836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:30,0 chr2 127958837 . T . PASS END=127958840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1189:0,91,255:32,0 chr2 127958841 . A . PASS END=127958841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:32,0 chr2 127958842 . C . PASS END=127958842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 127958843 . A . PASS END=127958843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1016:0,39,255:29,0 chr2 127958844 . G . PASS END=127958844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1227:0,91,255:33,0 chr2 127958845 . T . PASS END=127958845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1013:0,68,255:32,0 chr2 127958846 . C . PASS END=127958846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 127958847 . A . PASS END=127958847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,958:0,52,255:25,0 chr2 127958848 . G . PASS END=127958849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:35:0,84,1260:0,88,255:28,0 chr2 127958850 . T . PASS END=127958850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1111:0,50,255:27,0 chr2 127958851 . G . PASS END=127958854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,88,255:29,0 chr2 127958855 . G . PASS END=127958855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1073:0,72,255:26,0 chr2 127958856 . A . PASS END=127958858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,104,255:28,0 chr2 127958859 . C . PASS END=127958859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,928:0,52,255:27,0 chr2 127958860 . T . PASS END=127958860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 127958861 . G . PASS END=127958861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,947:0,79,255:28,0 chr2 127958862 . T . PASS END=127958867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 127958868 . A . PASS END=127958868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,822:0,59,255:28,0 chr2 127958869 . G . PASS END=127958870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,92,255:30,0 chr2 127958871 . C . PASS END=127958872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,934:0,73,255:27,0 chr2 127958873 . G . PASS END=127958875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 127958876 . C . PASS END=127958876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:23:30:0,23,695:0,23,255:23,0 chr2 127958877 . A . PASS END=127958878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,89,255:27,0 chr2 127958879 . A . PASS END=127958880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:51:30:0,51,912:0,51,255:26,0 chr2 127958881 . G . PASS END=127958881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 127958882 . A . PASS END=127958882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 127958883 . C . PASS END=127958901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:22:0,66,792:0,66,255:25,0 chr2 127958902 . C . PASS END=127958907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:17,0 chr2 127960948 . C . PASS END=127960962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1303:0,95,255:37,0 chr2 127960963 . T . PASS END=127960963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:33,0 chr2 127960964 . G . PASS END=127961147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:37:0,102,1530:0,102,255:40,0 chr2 127963476 . G . PASS END=127963485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,898:0,62,255:26,0 chr2 127963486 . G . PASS END=127963508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1048:0,84,255:30,0 chr2 127963509 . T . PASS END=127963509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1019:0,63,255:29,0 chr2 127963510 . C . PASS END=127963639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:31:0,82,949:0,82,255:40,0 chr2 127963640 . T . PASS END=127963640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr2 127963641 . T . PASS END=127963660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1058:0,87,255:30,0 chr2 127963661 . C . PASS END=127963666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:26,0 chr2 127977565 . C . PASS END=127977565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 127977566 . T . PASS END=127977566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 127977567 . G . PASS END=127977586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,415:0,39,255:13,0 chr2 127977587 . A . PASS END=127977587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 127977588 . A . PASS END=127977589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 127977590 . C . PASS END=127977590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 127977591 . C . PASS END=127977595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 127977596 . C . PASS END=127977599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 127977600 . A . PASS END=127977600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:12,0 chr2 127977601 . G . PASS END=127977602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 127977603 . A . PASS END=127977603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 127977604 . G . PASS END=127977613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 127977614 . A . PASS END=127977614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 127977615 . G . PASS END=127977622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 127977623 . A . PASS END=127977660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr2 127977661 . A . PASS END=127977700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 127977701 . C . PASS END=127977742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr2 127977743 . G . LowGQ END=127977846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,45:0,0,55:3,0 chr2 128014924 . T . PASS END=128014937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1105:0,90,255:31,0 chr2 128014938 . A . PASS END=128014938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr2 128014939 . T . PASS END=128014946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1155:0,80,255:33,0 chr2 128014947 . T . PASS END=128014947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:32,0 chr2 128014948 . G . PASS END=128014982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1124:0,88,255:35,0 chr2 128014983 . C . PASS END=128014983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1047:0,52,255:30,0 chr2 128014984 . T . PASS END=128015009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1097:0,82,255:33,0 chr2 128015010 . G . PASS END=128015010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:26,0 chr2 128015011 . A . PASS END=128015015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1156:0,83,255:29,0 chr2 128015016 . T . PASS END=128015020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,1113:0,60,255:26,0 chr2 128015021 . G . PASS END=128015022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 128015023 . A . PASS END=128015025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 128015026 . G . PASS END=128015028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 128015029 . A . PASS END=128015040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:26:0,66,990:0,78,255:25,0 chr2 128015041 . C . PASS END=128015041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:22,0 chr2 128015042 . A . PASS END=128015042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:23,0 chr2 128015043 . T . PASS END=128015043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,854:0,39,255:23,0 chr2 128015044 . C . PASS END=128015053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:22,0 chr2 128015054 . A . PASS END=128015054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,810:0,58,255:17,0 chr2 128015055 . C . PASS END=128015088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:25:0,61,856:0,61,255:26,0 chr2 128015089 . G . PASS END=128015099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 128015100 . A . PASS END=128015100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 128015101 . T . PASS END=128015120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1157:0,80,255:32,0 chr2 128015121 . T . PASS END=128015121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr2 128015122 . C . PASS END=128015266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,972:0,80,255:35,0 chr2 128015267 . C . PASS END=128015290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 128015291 . A . PASS END=128015303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:19,0 chr2 128015308 . C . PASS END=128015309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 128016872 . C . PASS END=128016876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,779:0,69,255:25,0 chr2 128016877 . T . PASS END=128016877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 128016878 . G . PASS END=128016910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr2 128016911 . C . PASS END=128016911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 128016912 . T . PASS END=128016912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr2 128016913 . C . PASS END=128016987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1111:0,80,255:35,0 chr2 128016988 . A . PASS END=128016990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1074:0,79,255:28,0 chr2 128016991 . C . PASS END=128016995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:27,0 chr2 128016996 . T . PASS END=128017022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr2 128017023 . A . PASS END=128017024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:25:0,48,720:0,59,255:18,0 chr2 128018063 . A . PASS END=128018063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 128018804 . C . PASS END=128018922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:41:0,105,1575:0,115,255:40,0 chr2 128028912 . C . PASS END=128028916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr2 128028917 . T . PASS END=128028917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 128028918 . T . PASS END=128028920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 128028921 . C . PASS END=128028921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 128028922 . T . PASS END=128028942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:18,0 chr2 128028943 . T . PASS END=128028943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,615:0,29,255:18,0 chr2 128028944 . T . PASS END=128028950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 128028951 . C . PASS END=128028985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:22,0 chr2 128028986 . A . PASS END=128028986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128028987 . T . PASS END=128029008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,719:0,63,255:22,0 chr2 128029009 . A . PASS END=128029009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 128029010 . T . PASS END=128029014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 128029015 . C . PASS END=128029020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,49,255:19,0 chr2 128029021 . G . PASS END=128029026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr2 128029027 . T . PASS END=128029029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 128030441 . C . PASS END=128030537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:53:0,120,1800:0,145,255:40,0 chr2 128030548 . A . PASS END=128030548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 128036749 . T . PASS END=128036951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:47:0,103,1690:0,103,255:40,0 chr2 128038023 . C . PASS END=128038197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:31:0,81,1215:0,90,255:40,0 chr2 128038198 . A . PASS END=128038207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 128038474 . C . PASS END=128038548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,127,255:40,0 chr2 128041861 . T . PASS END=128041865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1458:0,117,255:39,0 chr2 128044279 . C . PASS END=128044295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr2 128044296 . T . PASS END=128044322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1139:0,84,255:38,0 chr2 128044323 . T . PASS END=128044323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:37,0 chr2 128044324 . G . PASS END=128044593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:36:0,90,1332:0,99,255:40,0 chr2 128046236 . C . PASS END=128046244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:26,0 chr2 128046245 . G . PASS END=128046246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,991:0,87,255:29,0 chr2 128046247 . A . PASS END=128046247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:29,0 chr2 128046248 . C . PASS END=128046260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1125:0,90,255:32,0 chr2 128046261 . A . PASS END=128046261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:30,0 chr2 128046262 . C . PASS END=128046297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1196:0,81,255:37,0 chr2 128046298 . T . PASS END=128046298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:36,0 chr2 128046299 . T . PASS END=128046396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:35:0,87,1305:0,89,255:40,0 chr2 128046397 . T . PASS END=128046398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 128046399 . C . PASS END=128046400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,95,255:28,0 chr2 128046401 . C . PASS END=128046440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,906:0,62,255:26,0 chr2 128046899 . G . PASS END=128046899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:25,0 chr2 128046913 . C . PASS END=128046926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:31,0 chr2 128046927 . A . PASS END=128046927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr2 128046928 . A . PASS END=128046931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:33,0 chr2 128046932 . A . PASS END=128046932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1126:0,63,255:32,0 chr2 128046933 . C . PASS END=128046944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:94:36:0,94,1434:0,94,255:40,1 chr2 128046945 . C . PASS END=128046945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:78:43:0,78,1447:0,78,255:38,1 chr2 128046946 . T . PASS END=128047095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:41:0,95,1460:0,95,255:40,1 chr2 128047250 . C . PASS END=128047250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:31,0 chr2 128047265 . G . PASS END=128047273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:95:34:0,95,1349:0,95,255:36,0 chr2 128047274 . G . PASS END=128047274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr2 128047275 . C . PASS END=128047400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:36:0,90,1311:0,90,255:40,0 chr2 128047800 . C . PASS END=128047851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,152,255:40,0 chr2 128050171 . T . PASS END=128050171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 128050172 . C . PASS END=128050184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,615:0,51,255:19,0 chr2 128050185 . C . PASS END=128050194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:25,0 chr2 128050195 . C . PASS END=128050196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 128050197 . G . PASS END=128050197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 128050198 . C . PASS END=128050198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 128050199 . A . PASS END=128050199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 128050200 . T . PASS END=128050213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1094:0,90,255:30,0 chr2 128050214 . A . PASS END=128050214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 128050215 . C . PASS END=128050220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1108:0,87,255:30,0 chr2 128050221 . T . PASS END=128050221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:28,0 chr2 128050222 . C . PASS END=128050242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1139:0,80,255:37,0 chr2 128050243 . C . PASS END=128050243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:34,0 chr2 128050244 . T . PASS END=128050390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1184:0,85,255:40,0 chr2 128050391 . A . PASS END=128050391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,857:0,67,255:27,0 chr2 128050392 . A . PASS END=128050394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 128050395 . C . PASS END=128050422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,65,255:26,0 chr2 128051089 . C . PASS END=128051089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,652:0,54,255:18,0 chr2 128051090 . A . PASS END=128051095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 128051096 . A . PASS END=128051096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr2 128051097 . G . PASS END=128051133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:24,0 chr2 128051134 . C . PASS END=128051134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 128051135 . A . PASS END=128051135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 128051136 . G . PASS END=128051136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 128051137 . C . PASS END=128051137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 128051138 . C . PASS END=128051147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:31,0 chr2 128051148 . T . PASS END=128051148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:30,0 chr2 128051149 . G . PASS END=128051266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:31:0,93,1180:0,93,255:40,0 chr2 128051267 . T . PASS END=128051267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1307:0,73,255:33,0 chr2 128051268 . A . PASS END=128051276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:88:35:0,88,1160:0,88,255:35,0 chr2 128051277 . T . PASS END=128051277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1198:0,72,255:29,0 chr2 128051278 . C . PASS END=128051294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1216:0,83,255:32,0 chr2 128051442 . C . PASS END=128051509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:33:0,80,1136:0,80,255:36,0 chr2 128051510 . G . PASS END=128051510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:32,0 chr2 128051511 . T . PASS END=128051543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:82:33:0,82,1127:0,82,255:38,0 chr2 128051544 . C . PASS END=128051544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1365:0,70,255:31,0 chr2 128051545 . A . PASS END=128051552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1278:0,92,255:33,0 chr2 128051553 . G . PASS END=128051553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr2 128051554 . G . PASS END=128051657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:34:0,86,1201:0,86,255:40,0 chr2 128051688 . C . PASS END=128051688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 128065155 . C . PASS END=128065155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 128065156 . T . PASS END=128065161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr2 128065162 . T . PASS END=128065162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 128065163 . A . PASS END=128065365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,994:0,84,255:40,0 chr2 128065366 . G . PASS END=128065375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:29:0,60,900:0,87,255:25,0 chr2 128065376 . C . PASS END=128065380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:17,0 chr2 128066161 . C . PASS END=128066170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,688:0,44,255:19,0 chr2 128066171 . C . PASS END=128066184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:25,0 chr2 128066185 . C . PASS END=128066314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,1024:0,80,255:40,0 chr2 128066315 . T . PASS END=128066315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:26,0 chr2 128066316 . T . PASS END=128066317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:27,0 chr2 128066318 . A . PASS END=128066325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr2 128066326 . A . PASS END=128066338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:19:0,54,810:0,57,255:19,0 chr2 128072330 . C . PASS END=128072459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:43:0,102,1530:0,110,255:40,0 chr2 128075205 . C . PASS END=128075336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:56:0,120,1800:0,168,255:40,0 chr2 128075745 . C . PASS END=128075752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:26,0 chr2 128075753 . T . PASS END=128075887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:31:0,81,986:0,83,255:40,0 chr2 128075888 . G . PASS END=128075893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:27:0,72,1080:0,81,255:25,0 chr2 128079622 . A . PASS END=128079629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,613:0,51,255:19,0 chr2 128079630 . G . PASS END=128079637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:23,0 chr2 128079638 . G . PASS END=128079639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 128079640 . T . PASS END=128079644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,839:0,69,255:26,0 chr2 128079645 . A . PASS END=128079645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 128079646 . T . PASS END=128079646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 128079647 . T . PASS END=128079654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,999:0,81,255:27,0 chr2 128079655 . A . PASS END=128079664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr2 128079665 . G . PASS END=128079665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 128079666 . T . PASS END=128079666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 128079667 . C . PASS END=128079680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1070:0,87,255:30,0 chr2 128079681 . C . PASS END=128079681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 128079682 . T . PASS END=128079683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 128079684 . C . PASS END=128079684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 128079685 . T . PASS END=128079696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1058:0,90,255:30,0 chr2 128079697 . T . PASS END=128079705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,74,255:26,0 chr2 128079706 . A . PASS END=128079719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 128079720 . A . PASS END=128079722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:30:0,63,1033:0,63,255:29,0 chr2 128079723 . C . PASS END=128079727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 128079728 . T . PASS END=128079749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,922:0,62,255:26,0 chr2 128079750 . T . PASS END=128079750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 128079751 . G . PASS END=128079768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,931:0,65,255:25,0 chr2 128079769 . T . PASS END=128079769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr2 128079770 . C . PASS END=128079786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 128079787 . T . PASS END=128079790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 128079791 . C . PASS END=128079792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128079793 . C . PASS END=128079805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:18,0 chr2 128079806 . A G, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=2.430;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,12,0:0.600,0.000:20:6,6,0:2,6,0:47:85,0,48,429,249,678:255,0,220:5,0:5.0000e+01,7.7659e-05,5.1038e+01,4.2919e+02,2.8407e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,6,6:2,6,4,8 chr2 128079807 . G . PASS END=128079828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:16,0 chr2 128081478 . C . PASS END=128081570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:45:0,120,1800:0,135,255:40,0 chr2 128081750 . C . PASS END=128081817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,120,1800:0,120,255:40,0 chr2 128083304 . C . PASS END=128083383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:66:0,120,1800:0,181,255:40,0 chr2 128084263 . T . PASS END=128084264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 128084265 . G . PASS END=128084265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr2 128084266 . G . PASS END=128084267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 128084268 . C . PASS END=128084268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:30,0 chr2 128084269 . C . PASS END=128084378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:31:0,83,1081:0,83,255:40,0 chr2 128084379 . C . PASS END=128084379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:30,0 chr2 128084380 . T . PASS END=128084382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:31,0 chr2 128084383 . A . PASS END=128084393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,77,255:26,0 chr2 128087497 . C . PASS END=128087584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:59:0,120,1800:0,161,255:40,0 chr2 128087968 . C . PASS END=128088081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,153,255:40,0 chr2 128093446 . C . PASS END=128093545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:52:0,120,1800:0,140,255:40,0 chr2 128095314 . C . PASS END=128095354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:91:0,120,1800:0,246,255:40,0 chr2 128096508 . C . PASS END=128096520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,903:0,78,255:26,0 chr2 128096521 . G . PASS END=128096623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,1002:0,81,255:40,0 chr2 128096624 . C . PASS END=128096626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 128100702 . C . PASS END=128100705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,255,255:40,0 chr2 128175812 . A . PASS END=128175813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 128175814 . G . PASS END=128175815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,308:0,13,255:9,0 chr2 128175816 . G . PASS END=128175816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 128175817 . A . PASS END=128175829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:13,0 chr2 128175830 . A . PASS END=128175830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr2 128175831 . G . PASS END=128175832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 128175833 . G . PASS END=128175833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 128175834 . T . PASS END=128175835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr2 128175836 . T . PASS END=128175837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128175838 . G . PASS END=128175839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 128175840 . C . PASS END=128175841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr2 128175842 . T . PASS END=128175844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 128175845 . C . PASS END=128175845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr2 128175846 . C . PASS END=128175864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,574:0,48,255:19,0 chr2 128175865 . C . PASS END=128175865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 128175866 . A . PASS END=128175866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 128175867 . T . PASS END=128175870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 128175871 . T . PASS END=128175875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr2 128175876 . G . PASS END=128175882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:26,0 chr2 128175883 . G . PASS END=128175888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr2 128175889 . T . PASS END=128175889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 128175890 . T . PASS END=128175897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:32,0 chr2 128175898 . A . PASS END=128175898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 128175899 . A . PASS END=128175986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1109:0,80,255:40,0 chr2 128175987 . T . PASS END=128175987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1185:0,75,255:33,0 chr2 128175988 . T . PASS END=128175992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1221:0,91,255:35,0 chr2 128175993 . G . PASS END=128175993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr2 128175994 . T . PASS END=128176002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1255:0,89,255:34,0 chr2 128176003 . A . PASS END=128176020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1241:0,86,255:33,0 chr2 128176021 . T . PASS END=128176039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1016:0,71,255:28,0 chr2 128176040 . A T, 133.80 PASS DP=29;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,13,0:0,16,0:84:172,87,0,1039,87,1039:255,87,0:0,0:1.3380e+02,8.3800e+01,0.0000e+00,4.5000e+02,1.1857e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,22:0,0,17,12 chr2 128176041 . A . PASS END=128176050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,870:0,61,255:25,0 chr2 128176051 . T . PASS END=128176051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,813:0,45,255:21,0 chr2 128176052 . C . PASS END=128176055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 128176056 . A . PASS END=128176056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr2 128176057 . C . PASS END=128176060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr2 128176061 . C . PASS END=128176068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 128177382 . C . PASS END=128177434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1133:0,80,255:35,0 chr2 128177435 . T . PASS END=128177436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:30,0 chr2 128177437 . G . PASS END=128177440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:31,0 chr2 128177441 . T . PASS END=128177443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,86,255:26,0 chr2 128177444 . A . PASS END=128177444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 128177445 . G . PASS END=128177445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 128177446 . G . PASS END=128177452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,85,255:32,0 chr2 128177453 . A . PASS END=128177454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1174:0,63,255:31,0 chr2 128177455 . C . PASS END=128177588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:33:0,80,1228:0,80,255:40,0 chr2 128177601 . C . PASS END=128177601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr2 128178859 . A . PASS END=128178878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,649:0,41,255:19,0 chr2 128178879 . G . PASS END=128178879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:16,0 chr2 128178880 . A . PASS END=128178888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr2 128178889 . A . PASS END=128178892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 128178893 . G . PASS END=128178893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 128178894 . G . PASS END=128178896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:25,0 chr2 128178897 . C . PASS END=128178902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 128178903 . A . PASS END=128178905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 128178906 . C . PASS END=128178906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128178907 . G . PASS END=128178907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 128178908 . C . PASS END=128178908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128178909 . A . PASS END=128178909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 128178910 . A . PASS END=128178910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128178911 . A . PASS END=128178911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,881:0,70,255:26,0 chr2 128178912 . C . PASS END=128178923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1066:0,87,255:31,0 chr2 128178924 . T . PASS END=128178924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 128178925 . T . PASS END=128178958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1116:0,87,255:31,0 chr2 128178959 . G . PASS END=128179018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:26,0 chr2 128179019 . T . PASS END=128179022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 128179023 . A . PASS END=128179023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:18,0 chr2 128179024 . C . PASS END=128179025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 128180491 . A . PASS END=128180569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:17,0 chr2 128180570 . A . PASS END=128180570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128180571 . T . PASS END=128180571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,472:0,28,255:12,0 chr2 128180572 . C . PASS END=128180575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 128180576 . G . PASS END=128180576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 128180577 . G . PASS END=128180579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 128180595 . C . PASS END=128180613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 128180614 . T . PASS END=128180614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr2 128180615 . G . PASS END=128180623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 128180624 . T . LowGQ END=128180624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,349:3,0,255:10,0 chr2 128180625 . T . PASS END=128180628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 128180629 . C . PASS END=128180632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 128180633 . C . PASS END=128180638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 128180639 . G . PASS END=128180639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 128180640 . A . PASS END=128180649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 128180650 . C . PASS END=128180653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 128180654 . A . PASS END=128180654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 128180655 . G . PASS END=128180657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 128180658 . T . PASS END=128180669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 128180670 . A . PASS END=128180670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 128180671 . C . PASS END=128180679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 128180680 . C . PASS END=128180693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 128180694 . G . PASS END=128180694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 128180695 . C . PASS END=128180711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr2 128180712 . G . PASS END=128180712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 128180713 . C . PASS END=128180727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 128180728 . G . PASS END=128180729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 128180730 . G . PASS END=128180743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 128180744 . C . PASS END=128180744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 128180745 . G . PASS END=128180748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 128180749 . T . PASS END=128180752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 128180753 . G . PASS END=128180753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 128180754 . G . PASS END=128180754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:14,0 chr2 128180755 . G . PASS END=128180759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,43,255:16,0 chr2 128180760 . G . PASS END=128180761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:15,0 chr2 128180762 . T . PASS END=128180762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,523:0,15,255:16,0 chr2 128180763 . G . PASS END=128180763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 128180764 . G . PASS END=128180765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 128180766 . T . PASS END=128180766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,509:0,37,255:16,0 chr2 128180767 . G . PASS END=128180780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,597:0,51,255:17,0 chr2 128180781 . G . PASS END=128180781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 128180782 . G . PASS END=128180783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 128180784 . C . PASS END=128180784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 128180785 . G . PASS END=128180821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr2 128180822 . A . PASS END=128180822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 128180823 . G . PASS END=128180825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 128180826 . G . PASS END=128180829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 128180830 . G . PASS END=128180834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:18,0 chr2 128180835 . C . PASS END=128180871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,553:0,41,255:18,0 chr2 128180872 . G T, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,9,0:0,8,0:48:136,51,0,642,51,642:255,48,0:0,0:9.8159e+01,4.8159e+01,6.6269e-05,4.5000e+02,8.2929e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,10:0,0,5,12 chr2 128180873 . C . PASS END=128180882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,588:0,48,255:16,0 chr2 128180883 . G . PASS END=128180883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr2 128180884 . C . PASS END=128180884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 128180885 . G . PASS END=128180885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 128180886 . G . PASS END=128180888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,621:0,51,255:17,0 chr2 128180889 . G . PASS END=128180895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 128180896 . T . PASS END=128180897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 128180898 . A . PASS END=128180900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:18:0,39,585:0,41,255:13,0 chr2 128180901 . G . PASS END=128180901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 128180902 . C . PASS END=128180902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 128180903 . C . PASS END=128180905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:14,0 chr2 128180906 . G . PASS END=128180906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 128180907 . A . PASS END=128180909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 128180910 . A . PASS END=128180911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 128180912 . G . PASS END=128180914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 128180915 . G . PASS END=128180915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 128180916 . G . PASS END=128180927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 128180928 . G . PASS END=128180928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 128180929 . T . PASS END=128180929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 128180930 . A . PASS END=128180930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 128180931 . G . PASS END=128180939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 128180940 . C . PASS END=128180940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 128180941 . T . PASS END=128180945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 128180946 . A . PASS END=128180946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr2 128180947 . C . PASS END=128180948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 128180949 . A . PASS END=128180949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 128180950 . G . PASS END=128180957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,596:0,48,255:16,0 chr2 128180958 . A . PASS END=128180958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 128180959 . C . PASS END=128180965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 128180966 . C . PASS END=128180984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,31,255:13,0 chr2 128183661 . T . PASS END=128183803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:37:0,95,1319:0,95,255:40,0 chr2 128183812 . C . PASS END=128183813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr2 128184681 . G . PASS END=128184694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr2 128184695 . C . PASS END=128184699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 128184700 . A . PASS END=128184700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 128184701 . G . PASS END=128184702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 128184703 . A . PASS END=128184703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 128184704 . G . PASS END=128184713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 128184714 . T . PASS END=128184714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 128184715 . G . PASS END=128184716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128184717 . G . PASS END=128184718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,955:0,67,255:27,0 chr2 128184719 . G . PASS END=128184720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 128184721 . C . PASS END=128184722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 128184723 . G . PASS END=128184732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 128184733 . A . PASS END=128184735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1045:0,51,255:28,1 chr2 128184736 . C . PASS END=128184738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128184739 . C . PASS END=128184739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 128184740 . C . PASS END=128184740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128184741 . T . PASS END=128184769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,955:0,73,255:26,0 chr2 128184770 . T C, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.128;ReadPosRankSum=2.800;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:4,8,0:8,4,0:48:85,0,50,400,421,821:255,0,255:12,0:5.0000e+01,6.5233e-05,5.3000e+01,4.0031e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,6,6:7,5,6,6 chr2 128184771 . G . PASS END=128184795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 128184796 . T . PASS END=128184798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128185931 . A . PASS END=128185931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 128185933 . G . PASS END=128185941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr2 128185942 . A . PASS END=128185942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr2 128185943 . C . PASS END=128185949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,937:0,62,255:26,0 chr2 128185950 . C . PASS END=128185953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 128185954 . G . PASS END=128185954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:26,0 chr2 128185955 . G . PASS END=128186038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:28:0,83,957:0,83,255:36,0 chr2 128186039 . A . PASS END=128186039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1168:0,69,255:26,0 chr2 128186040 . C . PASS END=128186041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,82,255:27,0 chr2 128186042 . G . PASS END=128186048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr2 128186049 . C . PASS END=128186052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128186053 . C . PASS END=128186053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 128186054 . C . PASS END=128186057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 128186058 . C . PASS END=128186087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,986:0,67,255:26,0 chr2 128186088 . A . PASS END=128186088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr2 128186089 . T . PASS END=128186104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,868:0,69,255:23,0 chr2 128186105 . C . PASS END=128186116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:46:21:0,46,676:0,46,255:19,0 chr2 128186117 . G . PASS END=128186127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:20,0 chr2 128186128 . A . PASS END=128186128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr2 128186129 . T . PASS END=128186145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 128186146 . C . PASS END=128186148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr2 128186149 . T . PASS END=128186149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 128186150 . C . PASS END=128186155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,817:0,66,255:23,0 chr2 128186156 . G . PASS END=128186156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 128186157 . G . PASS END=128186186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:24,0 chr2 128186187 . G . PASS END=128186187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 128186188 . A . PASS END=128186190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 128186191 . C . PASS END=128186191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 128186192 . C . PASS END=128186193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,832:0,69,255:24,0 chr2 128186194 . A . LowGQ END=128186194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,5:24:0:24:0,0,586:11,0,255:19,0 chr2 128186195 . G . PASS END=128186214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,793:0,72,255:25,0 chr2 128186215 . T . PASS END=128186215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 128186216 . C . PASS END=128186223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 128186224 . T . PASS END=128186224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 128186225 . C . PASS END=128186230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:24,0 chr2 128186231 . T . PASS END=128186231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 128186232 . C . PASS END=128186250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,856:0,66,255:24,0 chr2 128186251 . A . PASS END=128186251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128186252 . G . PASS END=128186253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 128186254 . G . PASS END=128186255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 128186256 . A . PASS END=128186259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128186260 . A . PASS END=128186269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 128186270 . C . PASS END=128186274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 128186275 . T . PASS END=128186291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,690:0,44,255:19,0 chr2 128186292 . C . PASS END=128186292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 128186293 . T . PASS END=128186310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,690:0,44,255:18,0 chr2 128186311 . G . PASS END=128186311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 128186312 . G . PASS END=128186315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 128186316 . C . PASS END=128186316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:14,0 chr2 128186317 . G . PASS END=128186329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,529:0,41,255:15,0 chr2 128186330 . C . PASS END=128186331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 128186332 . A . PASS END=128186341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr2 128186342 . T . PASS END=128186342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 128186343 . G . PASS END=128186343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 128186344 . G . PASS END=128186344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 128186345 . G . PASS END=128186372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,637:0,44,255:18,0 chr2 128186373 . A . PASS END=128186373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 128186374 . C . PASS END=128186375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr2 128186376 . T . PASS END=128186376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 128186377 . G . PASS END=128186401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,666:0,41,255:18,0 chr2 128186402 . G . PASS END=128186407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 128186408 . G . PASS END=128186408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 128186409 . G . PASS END=128186416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 128186417 . G . PASS END=128186417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 128186418 . C . PASS END=128186434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 128186435 . C . PASS END=128186435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 128186436 . G . PASS END=128186508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,703:0,66,255:26,0 chr2 128186509 . G . PASS END=128186509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 128186510 . C . PASS END=128186522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 128186594 . C . PASS END=128186594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 128186603 . T . PASS END=128186603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 128186668 . T . PASS END=128186668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1435:0,104,255:38,0 chr2 128186674 . T . PASS END=128186674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1504:0,110,255:38,0 chr2 128186692 . G . PASS END=128186692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 128186698 . T . PASS END=128186698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 128186742 . G . PASS END=128186742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 128227926 . T . PASS END=128227941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:37:0,95,1291:0,95,255:40,0 chr2 128227942 . C T, 50.00 PASS DP=47;MQ=250.00;MQRankSum=5.852;ReadPosRankSum=4.381;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,25,0:0.532,0.000:47:8,14,0:14,11,0:48:85,0,50,886,787,1673:255,0,255:22,0:5.0000e+01,6.7045e-05,5.2644e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,8,16,9:10,12,13,12 chr2 128227943 . T . PASS END=128227961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,120,1800:0,125,255:40,0 chr2 128238620 . T . PASS END=128238751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:42:0,90,1521:0,90,255:40,0 chr2 128243481 . C . PASS END=128243499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,119,1627:0,119,255:40,0 chr2 128243500 . C . PASS END=128243558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:48:0,86,1345:0,86,255:40,0 chr2 128243559 . T . LowGQ END=128243559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,10:58:0:58:0,0,1374:7,0,255:40,0 chr2 128243560 . C . PASS END=128243560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,8:57:37:57:0,37,1371:0,37,255:40,0 chr2 128243561 . G . PASS END=128243563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:57:0,120,1800:0,137,255:40,0 chr2 128243564 . T . PASS END=128243564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,5:57:73:57:0,73,1378:0,73,255:40,0 chr2 128243565 . C . PASS END=128243575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,104,1649:0,104,255:40,0 chr2 128243576 . C . PASS END=128243576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:66:50:0,66,1215:0,66,255:40,0 chr2 128243577 . C . PASS END=128243579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,120,1800:0,134,255:40,0 chr2 128243580 . T . PASS END=128243580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:5:49:0,5,1352:0,5,255:36,0 chr2 128243581 . C . PASS END=128243592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:80:44:0,80,1386:0,80,255:40,0 chr2 128243593 . T . PASS END=128243593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:78:43:0,78,1186:0,78,255:34,0 chr2 128243594 . T . PASS END=128243604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:40:0,86,1224:0,86,255:37,0 chr2 128243605 . C . PASS END=128243605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:6:40:0,6,995:0,6,255:32,0 chr2 128243606 . C . PASS END=128243607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:35,0 chr2 128243608 . G . PASS END=128243608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1160:0,53,255:31,0 chr2 128243609 . G . PASS END=128243609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 128244129 . C . PASS END=128244240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,115,1643:0,115,255:40,0 chr2 128246755 . T . PASS END=128246811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,122,255:40,0 chr2 128247394 . C . PASS END=128247519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:84:42:0,84,1260:0,110,255:40,0 chr2 128249547 . T . PASS END=128249664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,112,1484:0,112,255:40,0 chr2 128250857 . C . PASS END=128250876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,839:0,69,255:26,0 chr2 128250877 . G . PASS END=128250879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 128250880 . C . PASS END=128250886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 128250887 . G . PASS END=128250890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128250891 . T . PASS END=128250891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 128250892 . T . PASS END=128250892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128250893 . G . PASS END=128250893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 128250894 . A . PASS END=128250896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128250897 . G . PASS END=128250899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 128250900 . G . PASS END=128250901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 128250902 . C . PASS END=128250902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 128250903 . A . PASS END=128250904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 128250905 . A . PASS END=128250905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,877:0,73,255:27,0 chr2 128250906 . C . PASS END=128250908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 128250909 . C . PASS END=128250910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 128250911 . A . PASS END=128250930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1026:0,82,255:33,0 chr2 128250931 . A . PASS END=128250931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 128250932 . T . PASS END=128250937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 128250938 . G . PASS END=128250965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:21:0,63,784:0,63,255:26,0 chr2 128250966 . A . PASS END=128250966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr2 128250967 . A . PASS END=128250973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr2 128250974 . T . PASS END=128250974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 128250975 . T . PASS END=128250977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 128250978 . A . PASS END=128250986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,53,255:18,0 chr2 128252448 . T . PASS END=128252530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:86:0,120,1800:0,234,255:40,0 chr2 128253574 . C . PASS END=128253695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1233:0,81,255:40,0 chr2 128253696 . T . PASS END=128253696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:31,0 chr2 128253697 . C . PASS END=128253704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:29,0 chr2 128253705 . A . PASS END=128253705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1004:0,79,255:27,0 chr2 128253706 . A . PASS END=128253708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 128253709 . T . PASS END=128253709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr2 128253710 . G . PASS END=128253712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128253713 . A . PASS END=128253719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:25,0 chr2 128253720 . C . PASS END=128253724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:27:0,45,675:0,81,255:16,0 chr2 128255716 . T . PASS END=128255813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:69:0,120,1800:0,180,255:40,0 chr2 128258794 . T . PASS END=128258799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:99:101:0,120,1800:0,255,255:40,0 chr2 128260391 . T . PASS END=128260448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,184,255:40,0 chr2 128260963 . T . PASS END=128261061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:76:0,120,1800:0,228,255:40,0 chr2 128261062 . G . PASS END=128261098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:90:0,120,1800:0,209,255:40,0 chr2 128261099 . C T, 50.00 PASS DP=90;MQ=250.00;MQRankSum=8.165;ReadPosRankSum=1.949;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,46,0:0.511,0.000:90:16,28,0:28,18,0:48:85,0,50,1533,1501,3033:255,0,255:35,0:5.0000e+01,6.5492e-05,5.2959e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,29,16,30:19,25,28,18 chr2 128261100 . A . PASS END=128261136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,133,255:40,0 chr2 128261137 . C . PASS END=128261152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,105,1575:0,114,255:40,0 chr2 128262260 . A . PASS END=128262394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:70:0,118,1800:0,118,255:40,0 chr2 128262395 . T . PASS END=128262395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,5:62:59:62:0,59,1954:0,59,255:40,0 chr2 128262396 . G . PASS END=128262508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:89:36:0,89,1111:0,89,255:40,0 chr2 128262509 . T . PASS END=128262509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:31,0 chr2 128262510 . G . PASS END=128262687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:85:34:0,85,1239:0,85,255:40,0 chr2 128262688 . T . PASS END=128262688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1410:0,79,255:40,0 chr2 128262689 . C . PASS END=128262707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:43:0,80,1371:0,80,255:40,0 chr2 128262708 . C . PASS END=128262708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1372:0,76,255:30,0 chr2 128262709 . C . PASS END=128262725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1459:0,90,255:40,0 chr2 128262726 . T . PASS END=128262726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1382:0,71,255:36,0 chr2 128262727 . T . PASS END=128262728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1557:0,110,255:38,0 chr2 128262729 . T . PASS END=128262729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1322:0,70,255:36,0 chr2 128262730 . G . PASS END=128262739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:41:0,85,1482:0,85,255:39,0 chr2 128262740 . T . PASS END=128262740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1434:0,57,255:38,0 chr2 128262741 . A . PASS END=128262743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1497:0,90,255:40,0 chr2 128262744 . A . PASS END=128262744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:38,0 chr2 128262745 . G . PASS END=128263206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:36:0,82,1225:0,82,255:40,1 chr2 128263207 . T . PASS END=128263207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,6:47:41:47:0,41,1244:0,41,255:37,0 chr2 128263208 . T . PASS END=128263210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,119,1643:0,119,255:40,0 chr2 128263211 . G . PASS END=128263211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:13:45:0,13,1160:0,13,255:36,0 chr2 128263212 . C . PASS END=128263212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1303:0,52,255:36,0 chr2 128263213 . C . PASS END=128263213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1621:0,119,255:40,1 chr2 128263214 . T . PASS END=128263214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:14:44:0,14,1109:0,14,255:35,1 chr2 128263215 . G . PASS END=128263217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:43:0,99,1414:0,99,255:40,0 chr2 128263218 . A . PASS END=128263218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1307:0,57,255:37,0 chr2 128263219 . A . PASS END=128263219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 128263220 . G . PASS END=128263220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:7:46:0,7,1172:0,7,255:37,0 chr2 128263221 . C . PASS END=128263224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,119,1597:0,119,255:40,0 chr2 128263225 . T . PASS END=128263225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1260:0,52,255:37,0 chr2 128263226 . C . PASS END=128263228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1562:0,118,255:40,0 chr2 128263229 . T . LowGQ END=128263229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,8:46:0:46:0,0,1125:53,0,255:36,0 chr2 128263230 . T . PASS END=128263231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:45:0,96,1560:0,96,255:40,0 chr2 128263232 . C . PASS END=128263232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:46:45:0,46,1240:0,46,255:38,0 chr2 128263233 . A . PASS END=128263236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:44:0,87,1432:0,87,255:40,0 chr2 128263237 . T . PASS END=128263237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1449:0,60,255:39,0 chr2 128263238 . C . PASS END=128263240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 128263241 . T . PASS END=128263241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1425:0,60,255:39,0 chr2 128263242 . A . PASS END=128263249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:95:42:0,95,1373:0,95,255:40,0 chr2 128263250 . G . PASS END=128263250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:41:43:0,41,1325:0,41,255:37,0 chr2 128263251 . A . PASS END=128263262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:42:0,93,1430:0,93,255:40,0 chr2 128263263 . A . PASS END=128263263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:41:43:0,41,1385:0,41,255:36,0 chr2 128263264 . T . PASS END=128263284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:37:0,84,1311:0,84,255:39,0 chr2 128263285 . T . PASS END=128263285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1186:0,53,255:32,0 chr2 128263286 . G . PASS END=128263286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 128263287 . A . PASS END=128263287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1177:0,75,255:33,0 chr2 128263288 . T . PASS END=128263289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,85,255:27,0 chr2 128263290 . T . PASS END=128263290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1092:0,55,255:26,0 chr2 128263291 . C . PASS END=128263291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,88,255:28,0 chr2 128263292 . C . PASS END=128263292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1161:0,55,255:26,0 chr2 128263293 . T . PASS END=128263293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,88,255:28,0 chr2 128263294 . T . PASS END=128263296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:61:35:0,61,1202:0,61,255:28,0 chr2 128263297 . G . PASS END=128263299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,91,255:28,0 chr2 128263300 . A . PASS END=128263300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:12:31:0,12,839:0,12,255:24,0 chr2 128263301 . G . PASS END=128263302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr2 128263303 . C . PASS END=128263303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:25,0 chr2 128263304 . C . PASS END=128263305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,980:0,57,255:24,0 chr2 128263306 . T . LowGQ END=128263306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,772:13,0,255:22,0 chr2 128263307 . C . PASS END=128263308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:25,0 chr2 128263309 . T . PASS END=128263309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,946:0,35,255:23,0 chr2 128263310 . C . PASS END=128263310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,910:0,40,255:24,0 chr2 128263311 . T . PASS END=128263311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:25,0 chr2 128263312 . C . PASS END=128263312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:25,0 chr2 128263313 . G . PASS END=128263313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,890:0,37,255:24,0 chr2 128263314 . A . PASS END=128263314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,73,255:23,0 chr2 128263315 . T . PASS END=128263315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,978:0,35,255:22,0 chr2 128263316 . C . PASS END=128263318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,855:0,40,255:18,0 chr2 128263319 . T . LowGQ END=128263319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,743:18,0,255:15,0 chr2 128263320 . A . PASS END=128263321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,909:0,48,255:18,0 chr2 128263322 . T . PASS END=128263322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:17,0 chr2 128263323 . T . PASS END=128263324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,810:0,54,255:17,0 chr2 128263325 . C . PASS END=128263325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:9:26:0,9,800:0,9,255:18,0 chr2 128263326 . A . PASS END=128263326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:18,0 chr2 128263327 . T . PASS END=128263328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:45:26:0,45,810:0,45,255:18,0 chr2 128281252 . C . PASS END=128281367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,102,1530:0,120,255:40,0 chr2 128283751 . C . PASS END=128283751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128283752 . T . PASS END=128283765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 128283766 . T . PASS END=128283766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr2 128283767 . G . PASS END=128283768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 128283769 . A . PASS END=128283769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:16,0 chr2 128283770 . A . PASS END=128283771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:16,0 chr2 128283772 . A . PASS END=128283772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,729:0,35,255:16,0 chr2 128283773 . T . PASS END=128283773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 128283774 . T . PASS END=128283774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:16,0 chr2 128283775 . C . PASS END=128283775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 128283776 . C . PASS END=128283776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr2 128283777 . G . PASS END=128283777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:16,0 chr2 128283778 . A . PASS END=128283780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:15:18:0,15,598:0,15,255:16,0 chr2 128283781 . C . PASS END=128283781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 128283782 . C . PASS END=128283782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:16,0 chr2 128283783 . A . PASS END=128283783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 128283784 . T . PASS END=128283784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 128284212 . C . PASS END=128284260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,141,255:40,0 chr2 128317298 . A . PASS END=128317315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:67:0,120,1800:0,197,255:40,0 chr2 128321728 . G . PASS END=128321728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 128321729 . G . PASS END=128321729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 128321730 . T . PASS END=128321732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 128321733 . C . PASS END=128321737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:18,0 chr2 128321738 . T . PASS END=128321738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 128321739 . G . PASS END=128321747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:19,0 chr2 128321748 . G . PASS END=128321757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,709:0,60,255:24,0 chr2 128321758 . A . PASS END=128321758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 128321759 . C . PASS END=128321767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:26,0 chr2 128321768 . C . PASS END=128321769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128321770 . G A, 46.47 PASS DP=29;MQ=248.44;MQRankSum=4.427;ReadPosRankSum=-0.292;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,11,0:0.379,0.000:29:9,8,0:9,3,0:46:81,0,50,394,615,1008:255,0,255:17,0:4.6470e+01,1.1959e-04,5.3000e+01,3.9351e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,7,4:11,7,8,3 chr2 128321771 . G . PASS END=128321771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 128321772 . C . PASS END=128321781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1074:0,90,255:31,0 chr2 128321782 . G . PASS END=128321784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1037:0,60,255:29,0 chr2 128321785 . G . PASS END=128321785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 128321786 . G . PASS END=128321786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:30,0 chr2 128321787 . C . PASS END=128321804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1122:0,96,255:33,0 chr2 128321805 . G . PASS END=128321805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:31,0 chr2 128321806 . C . PASS END=128321807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1166:0,96,255:32,0 chr2 128321808 . A . PASS END=128321812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1150:0,96,255:32,0 chr2 128321813 . A . PASS END=128321814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,950:0,62,255:30,0 chr2 128321815 . G . PASS END=128321815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 128321816 . T . PASS END=128321816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr2 128321817 . C . PASS END=128321821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:32,0 chr2 128321822 . T . PASS END=128321822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1018:0,79,255:29,0 chr2 128321823 . T . PASS END=128321827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 128321828 . A . PASS END=128321829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1004:0,77,255:29,0 chr2 128321830 . G . PASS END=128321834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 128321835 . G . PASS END=128321835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,995:0,54,255:27,0 chr2 128321836 . G . PASS END=128321836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 128321837 . G . PASS END=128321841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 128322808 . G . PASS END=128322811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:17,0 chr2 128322812 . A . PASS END=128322812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 128322813 . C . PASS END=128322822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:19,0 chr2 128322823 . G . PASS END=128322844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:24,0 chr2 128322845 . G . PASS END=128322851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 128322852 . G . PASS END=128322854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 128322855 . C . PASS END=128322855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 128322856 . C . PASS END=128322857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr2 128322858 . C . PASS END=128322878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1141:0,90,255:32,0 chr2 128322879 . C . PASS END=128322879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr2 128322880 . G . PASS END=128322898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1121:0,96,255:32,0 chr2 128322899 . A . PASS END=128322899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:29,0 chr2 128322900 . C . PASS END=128322914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr2 128322915 . C . PASS END=128322943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:26,0 chr2 128322944 . A . PASS END=128322945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 128322946 . C . PASS END=128322960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 128324218 . A . PASS END=128324248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1117:0,86,255:36,0 chr2 128324249 . A . PASS END=128324249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:35,0 chr2 128324250 . C . PASS END=128324263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,100,1269:0,100,255:38,0 chr2 128324264 . T . PASS END=128324264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:35,0 chr2 128324265 . G . PASS END=128324385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1164:0,85,255:40,0 chr2 128324386 . C . PASS END=128324402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:61:26:0,61,884:0,61,255:25,0 chr2 128327364 . C . PASS END=128327369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:26,0 chr2 128327370 . G . PASS END=128327380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 128327381 . G . PASS END=128327381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr2 128327382 . C . PASS END=128327421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1124:0,87,255:32,0 chr2 128327422 . A . PASS END=128327422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 128327423 . C . PASS END=128327425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 128327426 . T . PASS END=128327426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 128327427 . C . PASS END=128327428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 128327429 . G . PASS END=128327430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 128327431 . G . PASS END=128327434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 128327435 . A . PASS END=128327473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr2 128327474 . C . PASS END=128327485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:19,0 chr2 128331495 . C . PASS END=128331504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:23,0 chr2 128331505 . T . PASS END=128331521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,996:0,81,255:28,0 chr2 128331522 . A . PASS END=128331522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 128331523 . C . PASS END=128331526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 128331527 . A . PASS END=128331527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:27,0 chr2 128331528 . A . PASS END=128331564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:28:0,82,988:0,82,255:33,0 chr2 128331565 . T . PASS END=128331565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1115:0,72,255:31,0 chr2 128331566 . A . PASS END=128331585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1181:0,88,255:34,0 chr2 128331586 . G . PASS END=128331586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr2 128331587 . G . PASS END=128331606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,89,255:35,0 chr2 128331607 . T . PASS END=128331607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:57:35:0,57,1049:0,57,255:28,0 chr2 128331608 . C . PASS END=128331613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 128331614 . G . PASS END=128331614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 128331615 . A . PASS END=128331616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 128331617 . A . PASS END=128331637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,78,255:26,0 chr2 128334170 . G . PASS END=128334183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,817:0,66,255:25,0 chr2 128334184 . G . PASS END=128334192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr2 128334193 . T . PASS END=128334194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1054:0,74,255:30,0 chr2 128334195 . T . PASS END=128334197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 128334198 . T . PASS END=128334198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 128334199 . C . PASS END=128334239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1157:0,93,255:33,0 chr2 128334240 . T . PASS END=128334240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:31,0 chr2 128334241 . G . PASS END=128334248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr2 128334249 . T . PASS END=128334274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:25:0,61,864:0,61,255:26,0 chr2 128334275 . C . PASS END=128334275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 128334276 . T . PASS END=128334280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 128334281 . A . PASS END=128334281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:19,0 chr2 128334282 . T . PASS END=128334283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 128335708 . G . PASS END=128335861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:29:0,87,1072:0,87,255:40,0 chr2 128338321 . C . PASS END=128338321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 128338322 . T . PASS END=128338322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr2 128338323 . T . PASS END=128338346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,845:0,66,255:23,0 chr2 128338347 . T . PASS END=128338347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 128338348 . C . PASS END=128338397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr2 128339466 . G . PASS END=128339493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,106,1429:0,106,255:40,0 chr2 128339494 . T . PASS END=128339585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:42:0,84,1260:0,119,255:40,0 chr2 128339879 . G . PASS END=128339980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,89,255:40,0 chr2 128339981 . C . PASS END=128339981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 128339982 . T . PASS END=128339982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:25,0 chr2 128339983 . C . PASS END=128339991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 128339992 . A . PASS END=128339992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,827:0,23,255:22,0 chr2 128339993 . T . PASS END=128340005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,838:0,62,255:24,0 chr2 128340006 . A . PASS END=128340006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 128340007 . T . PASS END=128340007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 128340008 . T . PASS END=128340008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 128340009 . T . PASS END=128340010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,929:0,75,255:25,0 chr2 128340011 . G . PASS END=128340012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 128340013 . G . PASS END=128340020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:23,0 chr2 128340021 . G . PASS END=128340021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:17,0 chr2 128341697 . C . PASS END=128341700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:25,0 chr2 128341701 . G . PASS END=128341702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128341703 . G . PASS END=128341705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:27,0 chr2 128341706 . G . PASS END=128341712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:35,0 chr2 128341713 . A . PASS END=128341713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:34,0 chr2 128341714 . T . PASS END=128341716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1286:0,92,255:35,0 chr2 128341717 . A . PASS END=128341717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:14:36:0,14,1088:0,14,255:32,0 chr2 128341718 . C . PASS END=128341719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr2 128341720 . T . PASS END=128341721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:36,0 chr2 128341722 . G . PASS END=128341724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:69:36:0,69,1269:0,69,255:35,0 chr2 128341725 . A . PASS END=128341725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1296:0,94,255:36,0 chr2 128341726 . A . PASS END=128341726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1220:0,72,255:36,0 chr2 128341727 . C . PASS END=128341727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1288:0,45,255:36,0 chr2 128341728 . G . PASS END=128341729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 128341730 . G . PASS END=128341730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1274:0,37,255:34,0 chr2 128341731 . C . PASS END=128341732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:35,0 chr2 128341733 . C . PASS END=128341740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,101,1434:0,101,255:36,0 chr2 128341741 . A . PASS END=128341741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1230:0,72,255:34,0 chr2 128341742 . G . PASS END=128341787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1288:0,92,255:39,0 chr2 128341788 . T . PASS END=128341788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:33,0 chr2 128341789 . C . PASS END=128341797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:35,0 chr2 128341798 . T . PASS END=128341798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1115:0,72,255:31,0 chr2 128341799 . C . PASS END=128341820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,86,255:33,0 chr2 128341821 . A . PASS END=128341821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 128341822 . C . PASS END=128341832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 128341833 . C . PASS END=128341842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:25,0 chr2 128341843 . A . PASS END=128341852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 128341853 . C . PASS END=128341866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 128341867 . G . PASS END=128341867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128341868 . C . PASS END=128341869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 128341870 . T . PASS END=128341903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 128341904 . G A, 48.97 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=0.289;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:5,5,0:6,3,0:48:84,0,50,286,393,679:253,0,255:10,0:4.8967e+01,7.6882e-05,5.3000e+01,2.8574e+02,4.2764e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,1,7:6,5,2,6 chr2 128341905 . C . PASS END=128341907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 128342353 . G . PASS END=128342488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,119,1643:0,119,255:40,0 chr2 128345967 . G . PASS END=128345977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 128345978 . A . PASS END=128345978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:22,0 chr2 128345979 . A . PASS END=128345989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,807:0,62,255:26,0 chr2 128345990 . G . PASS END=128345990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 128345991 . T . PASS END=128345991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 128345992 . G . PASS END=128345996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 128345997 . G . PASS END=128345997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 128345998 . C . PASS END=128346039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1225:0,86,255:37,0 chr2 128346040 . T . PASS END=128346040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:35,0 chr2 128346041 . C . PASS END=128346107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1123:0,80,255:37,0 chr2 128346108 . A . PASS END=128346108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr2 128346109 . G . PASS END=128346121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 128346122 . C . PASS END=128346130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:24,0 chr2 128347667 . T . PASS END=128347801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:34:0,86,1233:0,86,255:40,0 chr2 128347802 . C . PASS END=128347802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1217:0,72,255:30,0 chr2 128347803 . T . PASS END=128347804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1151:0,85,255:31,0 chr2 128350369 . C . PASS END=128350376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:29,0 chr2 128350377 . C . PASS END=128350377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 128350378 . C . PASS END=128350391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1156:0,83,255:33,0 chr2 128350392 . G . PASS END=128350392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:31,0 chr2 128350393 . C . PASS END=128350394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:34,0 chr2 128350395 . G . PASS END=128350395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:33,0 chr2 128350396 . C . PASS END=128350397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1280:0,102,255:34,0 chr2 128350398 . G . PASS END=128350398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:31,0 chr2 128350399 . C . PASS END=128350521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1260:0,89,255:40,0 chr2 128351121 . C . PASS END=128351141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:25,0 chr2 128351142 . A . PASS END=128351142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,784:0,28,255:23,0 chr2 128351143 . T . PASS END=128351182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,931:0,62,255:26,0 chr2 128351183 . A . PASS END=128351183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:20,0 chr2 128351184 . G . PASS END=128351190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 128351191 . A . PASS END=128351191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 128351192 . A . PASS END=128351207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,697:0,60,255:21,0 chr2 128351208 . A . PASS END=128351219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,698:0,44,255:19,0 chr2 128354037 . G . PASS END=128354039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 128354040 . C . PASS END=128354040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 128354041 . A . PASS END=128354131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:32:0,93,1235:0,96,255:40,0 chr2 128363419 . G . PASS END=128363481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1135:0,86,255:34,0 chr2 128363482 . C . PASS END=128363482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 128363483 . A . PASS END=128363486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 128363487 . G . PASS END=128363487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:27,0 chr2 128363488 . G . PASS END=128363498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,987:0,73,255:25,0 chr2 128363499 . A . PASS END=128363499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,956:0,51,255:22,0 chr2 128363500 . G . PASS END=128363503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:23,0 chr2 128364781 . A . PASS END=128364783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128364784 . C . PASS END=128364839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,446:0,42,255:19,0 chr2 128364840 . G . PASS END=128364843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 128364844 . C . PASS END=128364849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 128364850 . A . PASS END=128364851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 128364852 . G . PASS END=128364852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 128364853 . C . PASS END=128364854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 128364855 . G . PASS END=128364855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 128364856 . C . PASS END=128364874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,778:0,63,255:22,0 chr2 128364875 . A . PASS END=128364875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 128364876 . G . PASS END=128364899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,65,255:25,0 chr2 128364900 . G . PASS END=128364901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 128364902 . G . PASS END=128364902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 128364903 . C . PASS END=128364927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:29,0 chr2 128364928 . G . PASS END=128364954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 128364955 . A . PASS END=128364963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:23:0,42,765:0,42,255:19,0 chr2 128364964 . G . PASS END=128364964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:16,0 chr2 128364965 . C . PASS END=128364998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,560:0,51,255:17,0 chr2 128364999 . T . PASS END=128364999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 128366274 . G . PASS END=128366395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:38:0,85,1388:0,85,255:40,0 chr2 128366396 . C . PASS END=128366396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1324:0,59,255:32,0 chr2 128366397 . G . PASS END=128366411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,85,255:34,0 chr2 128366412 . A . PASS END=128366418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:30:0,63,945:0,90,255:26,0 chr2 128366419 . G . PASS END=128366422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr2 128366423 . C . PASS END=128366424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 128366425 . A . PASS END=128366425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:21,0 chr2 128366426 . G . PASS END=128366432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:22,0 chr2 128366433 . C . PASS END=128366433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 128366434 . A . PASS END=128366441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128366442 . C . PASS END=128366442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:18,0 chr2 128366443 . C . PASS END=128366450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128366451 . G . PASS END=128366451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr2 128366452 . A . PASS END=128366453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128367081 . G . PASS END=128367083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1058:0,87,255:30,0 chr2 128367084 . C . PASS END=128367084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 128367085 . T . PASS END=128367182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1094:0,80,255:40,0 chr2 128367183 . T . PASS END=128367183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:34,0 chr2 128367184 . T . PASS END=128367219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1119:0,90,255:34,0 chr2 128367220 . C . PASS END=128367234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 128367235 . T . PASS END=128367242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr2 128367243 . C . PASS END=128367248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:28:0,74,1063:0,74,255:27,0 chr2 128367249 . C . PASS END=128367250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 128367251 . A . PASS END=128367256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 128367257 . G . PASS END=128367257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:25,0 chr2 128367258 . T . PASS END=128367258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 128367259 . T . PASS END=128367259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,931:0,32,255:23,0 chr2 128367260 . G . PASS END=128367281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,65,255:25,0 chr2 128367282 . G . PASS END=128367290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 128367424 . G . PASS END=128367429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 128367430 . C . PASS END=128367468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,840:0,69,255:26,0 chr2 128367469 . C . PASS END=128367475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 128367476 . A . PASS END=128367476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 128367477 . G . PASS END=128367478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:29,0 chr2 128367479 . C . PASS END=128367479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 128367480 . A . PASS END=128367534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1102:0,80,255:35,0 chr2 128367535 . G . PASS END=128367535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:30,0 chr2 128367536 . A . PASS END=128367536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 128367537 . C . PASS END=128367537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:29,0 chr2 128367538 . A . PASS END=128367547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 128367548 . G . PASS END=128367559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 128367560 . C . PASS END=128367560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128367561 . C . PASS END=128367575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr2 128367576 . C . PASS END=128367576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 128367577 . A . PASS END=128367582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 128367583 . T . PASS END=128367591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:20:0,41,723:0,41,255:19,0 chr2 128369825 . A . PASS END=128369858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,135,255:40,0 chr2 128369859 . T . PASS END=128369895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,102,1530:0,119,255:40,0 chr2 128369896 . A G, 49.93 PASS DP=43;MQ=249.66;MQRankSum=5.066;ReadPosRankSum=1.421;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,21,0:0.488,0.000:43:10,8,0:12,13,0:48:85,0,50,722,776,1498:255,0,255:20,0:4.9934e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,12,7,14:10,12,14,7 chr2 128369897 . G . PASS END=128369902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:39:0,93,1395:0,117,255:36,0 chr2 128370051 . G . PASS END=128370077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:33,0 chr2 128370078 . G . PASS END=128370078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:31,0 chr2 128370079 . A . PASS END=128370103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1211:0,92,255:36,0 chr2 128370104 . T . PASS END=128370104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:32,0 chr2 128370105 . G . PASS END=128370110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1349:0,95,255:32,0 chr2 128370111 . C . PASS END=128370111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr2 128370112 . G . PASS END=128370120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:31,0 chr2 128370121 . C . PASS END=128370132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,1040:0,63,255:26,0 chr2 128370133 . A . PASS END=128370135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128370136 . T . PASS END=128370150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 128370151 . G . PASS END=128370161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr2 128370162 . C . PASS END=128370169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr2 128370170 . C . PASS END=128370178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 128377915 . G . PASS END=128377926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr2 128377927 . C . PASS END=128377933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 128377934 . A . PASS END=128377934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 128377935 . T . PASS END=128377935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 128377936 . C . PASS END=128377936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 128377937 . T . PASS END=128377938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 128377939 . C . PASS END=128377939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 128377940 . A . PASS END=128377940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 128377941 . A . PASS END=128377941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:19,0 chr2 128377942 . G . PASS END=128377942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 128377943 . C . PASS END=128377944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 128377945 . G . PASS END=128377946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 128377947 . T . PASS END=128377951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128377952 . G . PASS END=128377952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr2 128377953 . A . PASS END=128377954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:19,0 chr2 128377955 . A . PASS END=128377955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128377956 . A . PASS END=128377956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 128377957 . C . PASS END=128377959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 128377960 . C . PASS END=128377960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 128377961 . A . PASS END=128377961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128377962 . A . PASS END=128377964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 128377965 . C . PASS END=128377966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128377967 . A . PASS END=128377968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,737:0,49,255:19,0 chr2 128377969 . C . PASS END=128377972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128377973 . C . PASS END=128377973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 128377974 . T . PASS END=128377983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,862:0,66,255:24,0 chr2 128377984 . C . PASS END=128377984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 128377985 . T . PASS END=128377986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 128377987 . G . PASS END=128377999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,770:0,53,255:21,0 chr2 128378000 . C . PASS END=128378000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128378001 . T . PASS END=128378025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 128378026 . A . PASS END=128378026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:14,0 chr2 128378027 . G . PASS END=128378028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 128378029 . G . PASS END=128378041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,31,255:13,0 chr2 128379557 . T . PASS END=128379645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr2 128379646 . T . PASS END=128379646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr2 128379647 . G . PASS END=128379649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 128379650 . G . PASS END=128379676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,341:0,27,255:9,0 chr2 128380777 . G . PASS END=128380784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:19,0 chr2 128380785 . G . PASS END=128380795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:21,0 chr2 128380796 . A . PASS END=128380796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 128380797 . C . PASS END=128380804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr2 128380805 . T . PASS END=128380805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 128380806 . C . PASS END=128380834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:26,0 chr2 128380835 . T . PASS END=128380836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 128380837 . A . PASS END=128380848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,970:0,78,255:26,0 chr2 128380849 . G . PASS END=128380853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 128380854 . A . PASS END=128380863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 128380864 . T . PASS END=128380864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,923:0,45,255:24,0 chr2 128380865 . C . PASS END=128380865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 128380866 . T . PASS END=128380866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:24,0 chr2 128380867 . C . PASS END=128380896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,837:0,69,255:24,0 chr2 128380897 . C . PASS END=128380907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,790:0,53,255:19,0 chr2 128380908 . C . PASS END=128380908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:19,0 chr2 128380909 . G . PASS END=128380918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 128380919 . G . PASS END=128380929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:32:16:0,32,565:0,32,255:13,0 chr2 128380930 . C . PASS END=128380930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 128380931 . A . PASS END=128380950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 128381668 . T . PASS END=128381694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 128381695 . C . PASS END=128381705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr2 128381706 . T . PASS END=128381706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr2 128381707 . G . PASS END=128381716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr2 128381717 . G . PASS END=128381727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr2 128381728 . A . PASS END=128381728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 128381729 . T . PASS END=128381733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128381734 . C . PASS END=128381735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 128381736 . G . PASS END=128381737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128381738 . A . PASS END=128381738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 128381739 . G . PASS END=128381739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128381740 . A . PASS END=128381761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr2 128381762 . C . PASS END=128381763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 128381764 . C . PASS END=128381764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 128381765 . C . PASS END=128381765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 128381766 . C . PASS END=128381766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 128381767 . T . PASS END=128381768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 128381769 . G . PASS END=128381781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:20,0 chr2 128381782 . C . PASS END=128381788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:21,0 chr2 128381789 . A . PASS END=128381789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 128381790 . A . PASS END=128381809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 128381810 . A . PASS END=128381810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 128381811 . C . PASS END=128381823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 128381824 . C . PASS END=128381824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr2 128381825 . C . PASS END=128381836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 128381837 . A . PASS END=128381837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,668:0,24,255:19,0 chr2 128381838 . G . PASS END=128381840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128381841 . T . PASS END=128381841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:19,0 chr2 128381842 . A . PASS END=128381843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128381844 . T . PASS END=128381848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,713:0,47,255:19,0 chr2 128381849 . G . PASS END=128381850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128381851 . C . PASS END=128381885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,630:0,41,255:17,0 chr2 128381886 . C . PASS END=128381886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,553:0,23,255:15,0 chr2 128381887 . T . PASS END=128381891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 128381892 . G . PASS END=128381892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 128381893 . A . PASS END=128381893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:15,0 chr2 128381894 . A . PASS END=128381895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 128382943 . G . PASS END=128382966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,653:0,41,255:19,0 chr2 128382967 . G . PASS END=128382967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 128382968 . C . PASS END=128382968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 128382969 . C . PASS END=128382981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:22,0 chr2 128382982 . G . PASS END=128382982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 128382983 . T . PASS END=128382984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 128382985 . C . PASS END=128382985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:22,0 chr2 128382986 . A . PASS END=128382990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 128382991 . G . PASS END=128382991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 128382992 . G . PASS END=128383049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:64:23:0,64,830:0,64,255:26,0 chr2 128383050 . G . PASS END=128383071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:17:0,42,630:0,51,255:18,0 chr2 128383072 . G . PASS END=128383073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 128383074 . C . PASS END=128383075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 128383076 . G . PASS END=128383083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:12,0 chr2 128383084 . A . PASS END=128383084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 128383085 . G . PASS END=128383086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 128383087 . C . PASS END=128383094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 128383095 . T . PASS END=128383103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 128383104 . C . PASS END=128383110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:13:0,23,405:0,23,255:9,0 chr2 128384550 . G . PASS END=128384576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:19,0 chr2 128384577 . C . PASS END=128384581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 128384582 . G . PASS END=128384582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 128384583 . G . PASS END=128384590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:25,0 chr2 128384591 . A . PASS END=128384591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr2 128384592 . G . PASS END=128384635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,837:0,69,255:26,0 chr2 128384636 . C . PASS END=128384643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 128384644 . T . PASS END=128384644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,872:0,42,255:26,0 chr2 128384645 . C . PASS END=128384662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,962:0,65,255:25,0 chr2 128384663 . C . PASS END=128384666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 128384667 . G . PASS END=128384667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,943:0,51,255:26,0 chr2 128384668 . G . PASS END=128384676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr2 128384677 . T . PASS END=128384677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:26,0 chr2 128384678 . C . PASS END=128384683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 128384684 . G . PASS END=128384693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr2 128384694 . A . PASS END=128384697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,68,255:19,0 chr2 128384698 . G . PASS END=128384720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,747:0,63,255:23,0 chr2 128384721 . T . PASS END=128384727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 128384728 . C . PASS END=128384757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 128384758 . G . PASS END=128384758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 128384759 . G . PASS END=128384767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 128384768 . T . PASS END=128384768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 128384769 . G . PASS END=128384782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:21,0 chr2 128384783 . T . PASS END=128384783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 128384784 . G . PASS END=128384787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 128384788 . T . PASS END=128384788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 128384789 . T . PASS END=128384797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,831:0,66,255:22,0 chr2 128384798 . A . PASS END=128384798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:21,0 chr2 128384799 . C . PASS END=128384805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 128384806 . G . PASS END=128384807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128384808 . G . PASS END=128384840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,878:0,66,255:24,0 chr2 128384841 . G . PASS END=128384858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr2 128384859 . A . PASS END=128384860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 128384861 . A . PASS END=128384871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 128384872 . C . PASS END=128384872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 128384873 . T . PASS END=128384881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr2 128384882 . A . PASS END=128384882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:11,0 chr2 128384883 . C . PASS END=128384883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 128384884 . A . PASS END=128384885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:16:0,24,360:0,48,255:8,0 chr2 128385947 . G . PASS END=128385950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:19,0 chr2 128385951 . G . PASS END=128385951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 128385952 . C . PASS END=128385955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128385956 . G . PASS END=128386003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,734:0,63,255:25,0 chr2 128386004 . T . PASS END=128386004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 128386005 . G . PASS END=128386007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 128386008 . T . PASS END=128386008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:23,0 chr2 128386009 . C . PASS END=128386014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr2 128386015 . G . PASS END=128386015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:21,0 chr2 128386016 . C . PASS END=128386022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 128386023 . G . PASS END=128386023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 128386024 . C . PASS END=128386044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,787:0,66,255:23,0 chr2 128386045 . T . PASS END=128386065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,630:0,41,255:19,0 chr2 128386066 . A . PASS END=128386067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 128386068 . A . PASS END=128386068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,427:0,11,255:12,0 chr2 128386069 . G . PASS END=128386072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128386073 . C . LowGQ END=128386074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,343:0,0,255:12,0 chr2 128386075 . T . PASS END=128386075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,466:0,6,255:13,0 chr2 128386076 . T . PASS END=128386076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 128386077 . T . PASS END=128386077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr2 128386078 . T . PASS END=128386078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 128386079 . C . PASS END=128386079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,441:0,3,255:12,0 chr2 128386080 . G . PASS END=128386081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 128386082 . C . LowGQ END=128386084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,347:0,0,255:12,0 chr2 128386085 . G . PASS END=128386085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128386086 . G . PASS END=128386086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:11,0 chr2 128386087 . C . PASS END=128386088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr2 128386089 . C . PASS END=128386090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,402:0,3,255:13,0 chr2 128386091 . G . PASS END=128386092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 128386093 . A . PASS END=128386093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:12,0 chr2 128386094 . G . PASS END=128386095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 128386096 . A . PASS END=128386096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:13,0 chr2 128386097 . C . LowGQ END=128386098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,388:0,0,255:12,0 chr2 128386099 . G . PASS END=128386099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 128386100 . G . PASS END=128386100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,410:0,9,255:12,0 chr2 128386101 . A . PASS END=128386101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128386102 . A . PASS END=128386102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:12,0 chr2 128386103 . G . PASS END=128386103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 128386104 . G . LowGQ END=128386104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,386:13,0,255:9,0 chr2 128386105 . C . PASS END=128386105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 128386106 . C . PASS END=128386106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,382:0,3,255:10,0 chr2 128386107 . A . PASS END=128386107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,441:0,11,255:10,0 chr2 128386108 . C . PASS END=128386108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr2 128386109 . A . PASS END=128386110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,432:0,3,255:8,0 chr2 128387220 . A . PASS END=128387240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:26,0 chr2 128387241 . T . PASS END=128387270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:30,0 chr2 128387271 . A . PASS END=128387271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,963:0,76,255:29,0 chr2 128387272 . G . PASS END=128387274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 128387275 . G . PASS END=128387275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 128387276 . C . PASS END=128387276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 128387277 . A . PASS END=128387277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr2 128387278 . G . PASS END=128387280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 128387281 . G . PASS END=128387281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 128387282 . C . PASS END=128387319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:33,0 chr2 128387320 . C . PASS END=128387320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:27,0 chr2 128387321 . A . PASS END=128387323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128387324 . A . PASS END=128387324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 128387325 . C . PASS END=128387333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 128387334 . C . PASS END=128387335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 128387336 . G . PASS END=128387353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 128387354 . T . PASS END=128387364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,77,255:22,0 chr2 128387365 . C . PASS END=128387401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,630:0,41,255:19,0 chr2 128388353 . A . PASS END=128388353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 128388354 . G . PASS END=128388354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 128388355 . C . PASS END=128388356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 128388357 . T . PASS END=128388358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 128388359 . C . PASS END=128388367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 128388368 . T . PASS END=128388368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 128388369 . C . PASS END=128388369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr2 128388370 . A . PASS END=128388370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 128388371 . C . PASS END=128388374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:25,0 chr2 128388375 . A . PASS END=128388375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr2 128388376 . G . PASS END=128388380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,946:0,65,255:26,0 chr2 128388381 . G . PASS END=128388385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 128388386 . C . PASS END=128388386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 128388387 . T . PASS END=128388399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:29,0 chr2 128388400 . G . PASS END=128388400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 128388401 . G . PASS END=128388403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1052:0,90,255:30,0 chr2 128388404 . C . PASS END=128388404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 128388405 . A . PASS END=128388468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1105:0,80,255:33,0 chr2 128388469 . C . PASS END=128388471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 128388472 . T . PASS END=128388473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128388474 . A . PASS END=128388477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,855:0,67,255:26,0 chr2 128388478 . C . PASS END=128388483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 128388781 . G . PASS END=128388784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 128388785 . C . PASS END=128388788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128388789 . A . PASS END=128388789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,603:0,16,255:16,0 chr2 128388790 . G . PASS END=128388791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128388792 . A . PASS END=128388796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 128388797 . A . PASS END=128388797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 128388798 . T . PASS END=128388847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 128388848 . G . PASS END=128388848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 128388849 . C . PASS END=128388856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr2 128388857 . T . PASS END=128388857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:23,0 chr2 128388858 . G . PASS END=128388892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:26,0 chr2 128388893 . C . PASS END=128388893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,898:0,39,255:22,0 chr2 128388894 . A . PASS END=128388896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 128388897 . C . PASS END=128388897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 128388898 . C . PASS END=128388909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 128388910 . C . PASS END=128388910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 128388911 . T . PASS END=128388922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 128388923 . T . PASS END=128388923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128388924 . G . PASS END=128388932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 128388933 . T . PASS END=128388938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 128389175 . C . PASS END=128389179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:19,0 chr2 128389180 . C . PASS END=128389189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:22,0 chr2 128389190 . T . PASS END=128389190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 128389191 . G . PASS END=128389206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,829:0,66,255:25,0 chr2 128389207 . C . PASS END=128389218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1024:0,81,255:31,0 chr2 128389219 . C . PASS END=128389219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:30,0 chr2 128389220 . C . PASS END=128389221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 128389222 . A . PASS END=128389296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1158:0,83,255:35,0 chr2 128389297 . A . PASS END=128389297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 128389298 . T . PASS END=128389314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 128389315 . C . PASS END=128389328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1000:0,68,255:25,0 chr2 128389821 . G . PASS END=128389853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:18,0 chr2 128389854 . G . PASS END=128389854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 128389855 . C . PASS END=128389856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128389857 . G . PASS END=128389882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 128389883 . A . PASS END=128389883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 128389884 . G . PASS END=128389906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr2 128389907 . A . PASS END=128389907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 128389908 . G . PASS END=128389908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr2 128389909 . T . PASS END=128389909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 128389910 . T . PASS END=128389941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,884:0,69,255:24,0 chr2 128389942 . C . PASS END=128389946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 128389947 . C . PASS END=128389955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 128389956 . C . PASS END=128389965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr2 128389966 . A . PASS END=128389976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:11,0 chr2 128390833 . G . PASS END=128390895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,988:0,84,255:33,0 chr2 128390896 . C . PASS END=128390897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr2 128390898 . G . PASS END=128390901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 128390902 . C . PASS END=128390913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1017:0,73,255:25,0 chr2 128390914 . C . PASS END=128390919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128390920 . C . PASS END=128390936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:25,0 chr2 128390937 . A . PASS END=128390938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:18,0 chr2 128391751 . A . PASS END=128391751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 128391752 . T . PASS END=128391752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 128391753 . G . PASS END=128391765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 128391766 . G . PASS END=128391766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 128391767 . C . PASS END=128391776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 128391777 . G . PASS END=128391784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr2 128391785 . A . PASS END=128391859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr2 128391860 . A . PASS END=128391861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 128391862 . A . PASS END=128391863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,435:0,6,255:12,1 chr2 128391864 . G . PASS END=128391864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 128392171 . G . PASS END=128392258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,121,255:40,0 chr2 128392695 . G . PASS END=128392696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 128392697 . G . PASS END=128392699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 128392700 . C . PASS END=128392780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1194:0,83,255:37,0 chr2 128392781 . A . PASS END=128392801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 128393297 . G . PASS END=128393298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 128393299 . G . PASS END=128393305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr2 128393306 . A . PASS END=128393317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1070:0,87,255:30,0 chr2 128393318 . G . PASS END=128393318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 128393319 . G . PASS END=128393439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:32:0,90,1210:0,90,255:40,0 chr2 128393440 . T . LowGQ END=128393440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,8:44:0:44:0,0,1195:0,0,255:32,0 chr2 128393441 . G . PASS END=128393471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,99,255:39,0 chr2 128393472 . A . PASS END=128393477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:30:0,63,1070:0,63,255:27,0 chr2 128393478 . A . PASS END=128393481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 128393482 . G . PASS END=128393482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 128393783 . A . PASS END=128393792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:23,0 chr2 128393793 . T . PASS END=128393793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 128393794 . A . PASS END=128393794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 128393795 . G . PASS END=128393795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 128393796 . C . PASS END=128393801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr2 128393802 . A . PASS END=128393803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 128393804 . A . PASS END=128393809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,68,255:25,0 chr2 128393810 . A . PASS END=128393810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr2 128393811 . A . PASS END=128393819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,915:0,64,255:26,0 chr2 128393820 . C . PASS END=128393827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1055:0,84,255:31,0 chr2 128393828 . G . PASS END=128393828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 128393829 . A . PASS END=128393886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1024:0,80,255:34,0 chr2 128393887 . C . PASS END=128393887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 128393888 . T . PASS END=128393899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:31,0 chr2 128394120 . C . PASS END=128394200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,86,255:39,0 chr2 128394201 . A . PASS END=128394203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 128394369 . G . PASS END=128394391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:23:0,64,845:0,64,255:26,0 chr2 128394392 . C . PASS END=128394399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 128394400 . T . PASS END=128394400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr2 128394401 . C . PASS END=128394401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 128394402 . T . PASS END=128394404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 128394405 . A . PASS END=128394405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128394406 . G . PASS END=128394406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 128394407 . C . PASS END=128394407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128394408 . T . PASS END=128394408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 128394409 . G . PASS END=128394409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr2 128394410 . G . PASS END=128394410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 128394411 . A . PASS END=128394411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:26,0 chr2 128394412 . G . PASS END=128394430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1116:0,87,255:33,0 chr2 128394431 . C . PASS END=128394431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr2 128394432 . C . PASS END=128394465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:34,0 chr2 128394466 . G . PASS END=128394466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 128394467 . C . PASS END=128394471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 128394472 . T . PASS END=128394488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,953:0,62,255:26,0 chr2 128394891 . G . PASS END=128394915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,714:0,57,255:19,0 chr2 128394916 . C . PASS END=128394920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 128394921 . T . PASS END=128394939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 128394940 . G . PASS END=128394966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 128394967 . A . PASS END=128394981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,35,255:13,0 chr2 128394982 . C . PASS END=128394992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:12:0,24,360:0,36,255:9,0 chr2 128396856 . T . PASS END=128396857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 128396858 . A . PASS END=128396971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,1039:0,81,255:40,0 chr2 128396972 . C . PASS END=128396972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:29,0 chr2 128396973 . G . PASS END=128396991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr2 128396992 . A . PASS END=128396992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:25,0 chr2 128396993 . C . PASS END=128396994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128396995 . A . PASS END=128396995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:26,0 chr2 128396996 . A . PASS END=128397004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,934:0,65,255:26,0 chr2 128397645 . T . PASS END=128397720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,100,1558:0,100,255:40,0 chr2 128397845 . C . PASS END=128397921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:63:0,120,1800:0,168,255:40,0 chr2 128398471 . C . PASS END=128398478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 128398479 . A . PASS END=128398501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,650:0,60,255:24,0 chr2 128398502 . C . PASS END=128398502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr2 128398503 . C . PASS END=128398506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 128398507 . C . PASS END=128398512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,908:0,81,255:28,0 chr2 128398513 . A . PASS END=128398513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 128398514 . T . PASS END=128398520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1041:0,87,255:29,0 chr2 128398521 . G . PASS END=128398521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 128398522 . G . PASS END=128398536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,996:0,84,255:28,0 chr2 128398537 . C . PASS END=128398537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr2 128398538 . T . PASS END=128398540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:28,0 chr2 128398541 . T . PASS END=128398563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,939:0,64,255:26,0 chr2 128399244 . C . PASS END=128399245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 128399246 . G . PASS END=128399248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128399249 . G . PASS END=128399250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 128399251 . A . PASS END=128399257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 128399258 . A . PASS END=128399258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 128399259 . G . PASS END=128399271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:17,0 chr2 128399272 . A . PASS END=128399278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr2 128399279 . T . PASS END=128399279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 128399280 . G . PASS END=128399283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 128399284 . A . PASS END=128399294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 128399295 . T . PASS END=128399295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128399296 . C . PASS END=128399308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 128399309 . C G, 49.06 PASS DP=21;MQ=250.00;MQRankSum=3.802;ReadPosRankSum=0.817;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,9,0:0.429,0.000:21:5,5,0:7,4,0:48:84,0,50,322,429,751:255,0,255:12,0:4.9064e+01,7.5588e-05,5.3000e+01,3.2189e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,5,4:5,7,5,4 chr2 128399310 . C . PASS END=128399315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128399316 . G . PASS END=128399344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 128399345 . T . PASS END=128399345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 128399346 . C . PASS END=128399346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 128399347 . T . PASS END=128399363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,623:0,41,255:19,0 chr2 128399364 . C . PASS END=128399373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 128399374 . C . PASS END=128399386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,712:0,44,255:19,0 chr2 128399387 . A . PASS END=128399391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128399392 . A . PASS END=128399392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 128399393 . G . PASS END=128399395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 128399396 . G . PASS END=128399433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,684:0,44,255:19,0 chr2 128399434 . C . PASS END=128399435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128399436 . T . PASS END=128399464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr2 128399465 . G . PASS END=128399466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 128399467 . T . PASS END=128399467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128399468 . G . PASS END=128399473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 128399474 . A . PASS END=128399474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 128399475 . G . PASS END=128399479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 128399480 . G . PASS END=128399523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,721:0,57,255:19,0 chr2 128399524 . G . PASS END=128399527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 128399528 . T . PASS END=128399529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128399530 . G . PASS END=128399566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,870:0,66,255:24,0 chr2 128399624 . C . PASS END=128399625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 128399626 . C . PASS END=128399628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128399629 . C . PASS END=128399629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:26,0 chr2 128399630 . G . PASS END=128399638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr2 128399639 . C . PASS END=128399646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,939:0,64,255:26,0 chr2 128399647 . G . PASS END=128399652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 128399653 . T . PASS END=128399653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 128399654 . G . PASS END=128399659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1155:0,90,255:30,0 chr2 128399660 . T . PASS END=128399660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 128399661 . C . PASS END=128399663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 128399664 . C . PASS END=128399664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 128399665 . C . PASS END=128399669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 128399670 . A . PASS END=128399674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 128399675 . C . PASS END=128399679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 128399680 . G . PASS END=128399680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 128399681 . G . PASS END=128399681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128399682 . C . PASS END=128399682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 128399683 . A . PASS END=128399694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1194:0,83,255:30,0 chr2 128399695 . T . PASS END=128399695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr2 128399696 . G . PASS END=128399701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:31,0 chr2 128399702 . G . PASS END=128399702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:30,0 chr2 128399703 . C . PASS END=128399720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1135:0,93,255:32,0 chr2 128399721 . G . PASS END=128399721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:29,0 chr2 128399722 . G . PASS END=128399733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1180:0,83,255:31,0 chr2 128399734 . G . PASS END=128399735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:30,0 chr2 128399736 . T . PASS END=128399736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 128399737 . C . PASS END=128399737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr2 128399738 . A . PASS END=128399742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 128399743 . T . PASS END=128399755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 128399756 . C . PASS END=128399756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 128399757 . T . PASS END=128399772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:26,0 chr2 128399773 . T . PASS END=128399774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 128400495 . T . PASS END=128400495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr2 128400498 . C . PASS END=128400570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,958:0,81,255:40,0 chr2 128400571 . C . PASS END=128400607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,106,1729:0,106,255:40,0 chr2 128400608 . C T, 185.44 PASS DP=46;MQ=249.29;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,22,0:0,24,0:135:223,138,0,1767,138,1767:255,138,0:0,0:1.8544e+02,1.3544e+02,0.0000e+00,4.5000e+02,1.7021e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,21:0,0,25,21 chr2 128400609 . T . PASS END=128400645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:35:0,92,1288:0,92,255:40,0 chr2 128400646 . G . PASS END=128400647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:31,0 chr2 128400651 . C . PASS END=128400651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:30,0 chr2 128407587 . A . PASS END=128407650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:38:0,102,1424:0,102,255:40,0 chr2 128408290 . G . PASS END=128408293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 128408294 . T . PASS END=128408294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 128408295 . G . PASS END=128408316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,899:0,75,255:26,0 chr2 128408317 . G . PASS END=128408361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1033:0,84,255:35,0 chr2 128408362 . C . PASS END=128408374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:31:0,60,1148:0,60,255:27,0 chr2 128408375 . A . PASS END=128408376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:51:30:0,51,1039:0,51,255:26,0 chr2 128408377 . G . PASS END=128408412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,65,255:26,0 chr2 128408413 . C . PASS END=128408414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,770:0,41,255:19,0 chr2 128408415 . T . PASS END=128408451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr2 128408452 . G . PASS END=128408455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 128408456 . T . PASS END=128408614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,884:0,62,255:26,0 chr2 128408615 . C . PASS END=128408623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:30,0 chr2 128408624 . T . PASS END=128408624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr2 128408625 . C . PASS END=128408632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr2 128408633 . C . PASS END=128408633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,978:0,60,255:29,0 chr2 128408634 . T . PASS END=128408784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1157:0,82,255:39,0 chr2 128408785 . T . PASS END=128408785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 128408786 . G . PASS END=128408810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:31,0 chr2 128408811 . G . PASS END=128408811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr2 128408812 . T . PASS END=128408818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 128408819 . A . PASS END=128408830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,63,255:25,0 chr2 128408831 . G . PASS END=128408833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 128408834 . C . PASS END=128408883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,66,255:25,0 chr2 128408884 . A . PASS END=128408890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,745:0,49,255:19,0 chr2 128408891 . G . PASS END=128408891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 128408892 . G . PASS END=128408895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 128408896 . C . PASS END=128408900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128408901 . G . PASS END=128408901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr2 128408902 . C . PASS END=128408935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:23,0 chr2 128408936 . C . PASS END=128408940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128408941 . G . PASS END=128408947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 128408948 . G . PASS END=128408948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 128408949 . C . PASS END=128409010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,884:0,61,255:26,0 chr2 128409011 . G . PASS END=128409012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128409013 . G . PASS END=128409043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,945:0,62,255:26,0 chr2 128409044 . G . PASS END=128409069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,992:0,81,255:29,0 chr2 128409070 . A . PASS END=128409070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,886:0,70,255:25,0 chr2 128409071 . C . PASS END=128409086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 128409087 . C . PASS END=128409127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,74,255:26,0 chr2 128409128 . C . PASS END=128409128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128409129 . A . PASS END=128409129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 128409130 . T . PASS END=128409132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 128409133 . T . PASS END=128409138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 128409139 . T . PASS END=128409139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr2 128409140 . G . PASS END=128409169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,669:0,61,255:26,0 chr2 128409170 . C . PASS END=128409171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128409172 . T . PASS END=128409172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 128409173 . C . PASS END=128409177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 128409178 . G . PASS END=128409178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:25,0 chr2 128409179 . G . PASS END=128409180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,994:0,70,255:26,0 chr2 128409181 . C . PASS END=128409181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:25,0 chr2 128409182 . A . PASS END=128409182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 128409183 . C . PASS END=128409184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128409185 . C . PASS END=128409187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 128409188 . C . PASS END=128409195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 128409196 . T . PASS END=128409196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 128409197 . G . PASS END=128409203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1202:0,90,255:31,0 chr2 128409204 . T . PASS END=128409204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr2 128409205 . T . PASS END=128409218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1082:0,93,255:31,0 chr2 128409219 . T . PASS END=128409219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 128409220 . T . PASS END=128409240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,92,255:32,0 chr2 128409241 . T . PASS END=128409241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:30,0 chr2 128409242 . G . PASS END=128409252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:30,0 chr2 128409253 . A . PASS END=128409253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 128409254 . A . PASS END=128409257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 128409258 . C . PASS END=128409258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:26,0 chr2 128409259 . T . PASS END=128409296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1169:0,80,255:32,0 chr2 128409297 . G . PASS END=128409312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 128409313 . C . PASS END=128409329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:21:0,44,765:0,44,255:19,0 chr2 128410658 . T . PASS END=128410658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 128410659 . C . PASS END=128410672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr2 128410673 . G . PASS END=128410688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:18,0 chr2 128410689 . C . PASS END=128410689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 128410690 . G . PASS END=128410694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr2 128410695 . G . PASS END=128410709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:21,0 chr2 128410710 . G . PASS END=128410710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128410711 . G . PASS END=128410712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128410713 . C T, 44.83 PASS DP=21;MQ=250.00;MQRankSum=3.618;ReadPosRankSum=1.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,7,0:0.333,0.000:21:7,5,0:7,2,0:44:80,0,47,180,180,180:200,0,255:13,0:4.4830e+01,1.8612e-04,5.0000e+01,1.7960e+02,2.1437e+02,1.8261e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,6,4,3:5,9,2,5 chr2 128410714 . G . PASS END=128410717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 128410718 . G A, 272.95 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,13,0:0,9,0:223:311,226,0,411,411,411:255,66,0:0,0:2.7295e+02,2.2295e+02,0.0000e+00,4.0772e+02,4.4251e+02,4.1073e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,12,10:0,0,9,13 chr2 128410719 . C . PASS END=128410754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,817:0,66,255:23,0 chr2 128410755 . A . PASS END=128410755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 128410756 . C . PASS END=128410762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 128410763 . A . PASS END=128410763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr2 128410764 . A . PASS END=128410765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 128410766 . A . PASS END=128410766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:20,0 chr2 128410767 . G . PASS END=128410767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 128410768 . C . PASS END=128410781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 128410782 . G . PASS END=128410791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 128410792 . C T, 109.28 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,11,0:0,10,0:59:147,62,0,748,62,748:255,63,0:0,0:1.0928e+02,5.9283e+01,5.1772e-06,4.5000e+02,9.4053e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,12:0,0,9,12 chr2 128410793 . G . PASS END=128410794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128410795 . A . PASS END=128410799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128411998 . C . PASS END=128412007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 128412008 . T . PASS END=128412008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 128412009 . C . PASS END=128412012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 128412013 . A . PASS END=128412013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 128412014 . C . PASS END=128412014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 128412015 . A . PASS END=128412015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 128412016 . A . PASS END=128412027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:32,0 chr2 128412028 . G . PASS END=128412028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 128412029 . C . PASS END=128412061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:34,0 chr2 128412062 . A . PASS END=128412062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:31,0 chr2 128412063 . G . PASS END=128412106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1125:0,80,255:33,0 chr2 128412107 . T . PASS END=128412107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 128412108 . G . PASS END=128412115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128412116 . C . PASS END=128412117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 128412118 . C . PASS END=128412118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128412404 . C . PASS END=128412470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1216:0,83,255:37,0 chr2 128414977 . C . PASS END=128414987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1105:0,84,255:31,0 chr2 128414988 . G . PASS END=128414988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:30,0 chr2 128414989 . C . PASS END=128415106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1177:0,80,255:39,0 chr2 128415107 . A . PASS END=128415126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:25,0 chr2 128415127 . C . PASS END=128415127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:19,0 chr2 128415128 . G . PASS END=128415130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 128415131 . A . PASS END=128415131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,0 chr2 128415132 . T . PASS END=128415132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 128415133 . A . PASS END=128415133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,721:0,27,255:20,0 chr2 128415134 . T . PASS END=128415134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 128415135 . T . PASS END=128415136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128421880 . C . PASS END=128421902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 128421903 . C . PASS END=128421914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr2 128421915 . C . PASS END=128421915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 128421916 . C . PASS END=128421962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:6,0 chr2 128431252 . C . PASS END=128431317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,108,1504:0,110,255:40,0 chr2 128432588 . C . PASS END=128432598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr2 128459103 . A . PASS END=128459107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 128459108 . G . PASS END=128459108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 128459109 . G . PASS END=128459110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 128459111 . C . PASS END=128459176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:13,0 chr2 128459177 . G . PASS END=128459185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 128459186 . C . PASS END=128459213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,271:0,21,255:9,0 chr2 128459214 . C G, 68.14 PASS DP=7;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,4,0:0,3,0:18:106,21,0,271,21,271:255,21,0:0,0:6.8135e+01,1.8135e+01,6.7260e-02,2.6846e+02,5.2905e+01,2.7146e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,5:0,0,5,2 chr2 128459215 . G . PASS END=128459217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 128459218 . C . PASS END=128459247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:6,0 chr2 128459248 . T . PASS END=128459251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:5:0,6,90:0,15,186:2,0 chr2 128459252 . C . PASS END=128459359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,70:0,6,70:3,0 chr2 128459360 . G . PASS END=128459386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:4,0 chr2 128459387 . G . LowGQ END=128459417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,90:0,0,104:3,0 chr2 128459418 . C . PASS END=128459438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,117:0,12,117:5,0 chr2 128459439 . T . LowGQ END=128459439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 128459440 . C . PASS END=128459470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 128459471 . C . LowGQ END=128459471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 128459472 . G . PASS END=128459494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 128459495 . G . LowDepth;LowGQ END=128459658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 128459659 . G . PASS END=128459691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 128459692 . G . PASS END=128459692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 128459693 . C . PASS END=128459694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 128459695 . T . PASS END=128459701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 128459702 . G . PASS END=128459750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 128463897 . C . PASS END=128463907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 128463908 . T . PASS END=128463957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,543:0,42,255:19,0 chr2 128463958 . C . PASS END=128463958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 128463959 . T . PASS END=128463963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128463964 . C . PASS END=128463974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 128463975 . A . PASS END=128463975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 128463976 . C . PASS END=128463976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 128463977 . T . PASS END=128463981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128463982 . C . PASS END=128463982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128463983 . T . PASS END=128463983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 128463984 . C . PASS END=128463997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 128463998 . A . PASS END=128463998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,650:0,33,255:19,0 chr2 128463999 . A . PASS END=128463999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 128464000 . G . PASS END=128464010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 128464011 . G . PASS END=128464067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,817:0,66,255:24,0 chr2 128464068 . T . PASS END=128464081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 128464082 . G . PASS END=128464083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128464084 . C . PASS END=128464105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr2 128464106 . C . PASS END=128464126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 128466251 . C . PASS END=128466264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,482:0,42,255:17,0 chr2 128466265 . T . PASS END=128466265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 128466266 . C . PASS END=128466287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,592:0,40,255:19,0 chr2 128466288 . C . PASS END=128466288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 128466289 . T . PASS END=128466289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 128466290 . C . PASS END=128466292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 128466293 . T . PASS END=128466293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 128466294 . C . PASS END=128466294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128466295 . T . PASS END=128466295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:19,0 chr2 128466296 . C . PASS END=128466299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 128466300 . G . PASS END=128466300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 128466301 . T . PASS END=128466301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 128466302 . G . PASS END=128466302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr2 128466303 . C . PASS END=128466306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 128466307 . G . PASS END=128466307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 128466308 . A . PASS END=128466315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:24,0 chr2 128466316 . G . PASS END=128466316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 128466317 . G . PASS END=128466327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,909:0,64,255:26,0 chr2 128466328 . C . PASS END=128466329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 128466330 . G . PASS END=128466347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 128466348 . T . PASS END=128466348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr2 128466349 . A . PASS END=128466349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 128466350 . G . PASS END=128466350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:25,0 chr2 128466351 . G . PASS END=128466351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128466352 . G . PASS END=128466358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,984:0,68,255:26,0 chr2 128466359 . T . PASS END=128466359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:25,0 chr2 128466360 . G . PASS END=128466365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,959:0,65,255:26,0 chr2 128466366 . G . PASS END=128466366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 128466367 . C . PASS END=128466368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128466369 . T . PASS END=128466369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,923:0,45,255:26,0 chr2 128466370 . T . PASS END=128466370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:24,0 chr2 128466371 . G . PASS END=128466373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128466374 . G . PASS END=128466374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 128466375 . A . PASS END=128466375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128466376 . G . PASS END=128466376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 128466377 . A . PASS END=128466379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128466380 . A . PASS END=128466387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,978:0,70,255:26,0 chr2 128466388 . T . PASS END=128466388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,834:0,31,255:26,0 chr2 128466389 . C . PASS END=128466394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 128466395 . T . PASS END=128466395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 128466396 . G . PASS END=128466396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 128466397 . G . PASS END=128466397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 128466398 . C . PASS END=128466398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 128466399 . T . PASS END=128466404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 128466405 . A . PASS END=128466407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 128466408 . A . PASS END=128466408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128466409 . C . PASS END=128466421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:24:0,63,945:0,65,255:24,0 chr2 128466422 . G . PASS END=128466422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 128466423 . A . PASS END=128466427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 128466428 . C . PASS END=128466463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,554:0,44,255:19,0 chr2 128466464 . G . PASS END=128466466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 128467064 . C . PASS END=128467067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 128467068 . C . PASS END=128467068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 128467069 . T . PASS END=128467110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,979:0,80,255:32,0 chr2 128467111 . A . PASS END=128467111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:30,0 chr2 128467112 . A . PASS END=128467133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:33,0 chr2 128467134 . G . PASS END=128467134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr2 128467135 . G . PASS END=128467156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1189:0,88,255:34,0 chr2 128467267 . C . PASS END=128467274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,74,255:26,0 chr2 128467275 . G . PASS END=128467279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 128467280 . C . PASS END=128467280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 128467281 . C . PASS END=128467284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 128467285 . C . PASS END=128467285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 128467286 . T . PASS END=128467286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 128467287 . C . PASS END=128467287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 128467288 . G . PASS END=128467295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 128467296 . A . PASS END=128467303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,917:0,67,255:26,0 chr2 128467304 . T . PASS END=128467306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128467307 . T . PASS END=128467307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:25,0 chr2 128467308 . C . PASS END=128467308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 128467309 . G . PASS END=128467315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr2 128467316 . T . PASS END=128467324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 128467325 . A . PASS END=128467327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 128467328 . A . PASS END=128467328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 128467329 . T . PASS END=128467331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1108:0,87,255:29,0 chr2 128467332 . A . PASS END=128467332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 128467333 . A . PASS END=128467335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 128467336 . T . PASS END=128467336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 128467337 . C . PASS END=128467345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,898:0,84,255:28,0 chr2 128467346 . A . PASS END=128467346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 128467347 . C . PASS END=128467351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128467352 . G . PASS END=128467405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr2 128467406 . C . PASS END=128467430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,720:0,51,255:19,0 chr2 128471157 . C . PASS END=128471161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 128471162 . T . PASS END=128471166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128471167 . T . PASS END=128471167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:12,0 chr2 128471168 . G . PASS END=128471172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 128471173 . C . PASS END=128471173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 128471174 . T . PASS END=128471177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128471178 . A . PASS END=128471181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 128471182 . G . PASS END=128471182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 128471183 . T . PASS END=128471189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 128471190 . T . PASS END=128471198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128471199 . C . PASS END=128471199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 128471200 . G . PASS END=128471210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 128471211 . T . PASS END=128471211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 128471212 . C . PASS END=128471237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr2 128471238 . G . PASS END=128471238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:9,0 chr2 128471239 . C . PASS END=128471245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 128471246 . A . PASS END=128471247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 128471248 . G . PASS END=128471293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 128471294 . A . PASS END=128471294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 128471295 . T . PASS END=128471302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,557:0,32,255:13,0 chr2 128471303 . A . PASS END=128471311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:15,0 chr2 128471312 . C . PASS END=128471312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 128471313 . C . PASS END=128471331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,615:0,48,255:17,0 chr2 128471332 . A . PASS END=128471332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,521:0,34,255:16,0 chr2 128471333 . C . PASS END=128471334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,621:0,54,255:18,0 chr2 128471335 . T . PASS END=128471335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:16,0 chr2 128471336 . C . PASS END=128471338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 128471339 . T . PASS END=128471339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 128471340 . T . PASS END=128471344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:19,0 chr2 128471345 . C . PASS END=128471350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr2 128471351 . A . PASS END=128471351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 128471352 . G . PASS END=128471353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 128471354 . T . PASS END=128471356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,678:0,47,255:19,0 chr2 128471357 . T . PASS END=128471363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 128471364 . C . PASS END=128471364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:20,0 chr2 128471365 . C . PASS END=128471365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,680:0,33,255:19,0 chr2 128471366 . C . PASS END=128471370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 128471371 . A . PASS END=128471371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,590:0,30,255:18,0 chr2 128471372 . T . PASS END=128471372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr2 128471373 . T . PASS END=128471377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 128471378 . T . PASS END=128471378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 128471379 . A . PASS END=128471379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 128471380 . A . PASS END=128471380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 128471381 . C . PASS END=128471384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 128471385 . T . PASS END=128471385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,656:0,49,255:20,0 chr2 128471386 . G . PASS END=128471411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 128471412 . T . PASS END=128471412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,843:0,56,255:23,0 chr2 128471413 . C . PASS END=128471418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 128471419 . G . PASS END=128471419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 128471420 . T . PASS END=128471455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr2 128471456 . A . PASS END=128471457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 128471458 . G . PASS END=128471458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 128471459 . C . PASS END=128471459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128471460 . C . PASS END=128471474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,986:0,67,255:26,0 chr2 128471475 . C . PASS END=128471476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128471477 . G . PASS END=128471479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:25,0 chr2 128471480 . G . PASS END=128471482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128471483 . C . PASS END=128471483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 128471484 . T . PASS END=128471484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128471485 . G . PASS END=128471485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 128471486 . G . PASS END=128471487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128471488 . C . PASS END=128471489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 128471490 . C . PASS END=128471490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 128471491 . C . PASS END=128471492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 128471493 . C . PASS END=128471496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 128471497 . A . PASS END=128471503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 128471504 . C . PASS END=128471508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 128471509 . C . PASS END=128471509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 128471510 . G . PASS END=128471516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1127:0,87,255:31,0 chr2 128471517 . T . PASS END=128471517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 128471518 . G . PASS END=128471519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 128471520 . T . PASS END=128471520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1062:0,54,255:30,0 chr2 128471521 . C . PASS END=128471561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1103:0,88,255:36,0 chr2 128471562 . C . PASS END=128471562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr2 128471563 . C . PASS END=128471595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1095:0,93,255:32,0 chr2 128474729 . C . PASS END=128474732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 128474733 . G . PASS END=128474735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 128474736 . G . PASS END=128474739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 128474740 . C . PASS END=128474740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 128474741 . C . PASS END=128474787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr2 128474788 . T . PASS END=128474801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 128474802 . T . PASS END=128474811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:12:8:0,12,180:0,24,235:6,0 chr2 128474812 . G . PASS END=128474837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:3:0,6,90:0,9,72:3,0 chr2 128476839 . C . PASS END=128476851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 128476852 . G . PASS END=128476856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 128476857 . G . PASS END=128476857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 128476858 . G . PASS END=128476884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,448:0,45,255:15,0 chr2 128476885 . T . PASS END=128476885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 128476886 . G . PASS END=128476887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 128476888 . T . PASS END=128476888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,1 chr2 128476889 . G . LowGQ END=128476890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,392:0,0,255:14,1 chr2 128476891 . T . PASS END=128476893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,1 chr2 128476894 . A . LowGQ END=128476894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,455:0,0,255:14,1 chr2 128476895 . A . PASS END=128476895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:16:17:0,16,541:0,16,255:16,1 chr2 128476896 . T . LowGQ END=128476896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,453:31,0,255:13,1 chr2 128476897 . G . PASS END=128476900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 128476901 . T . PASS END=128476901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr2 128476902 . T . PASS END=128476907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,1 chr2 128476908 . T . PASS END=128476909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr2 128476910 . G . PASS END=128476912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 128476913 . A . PASS END=128476913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr2 128476914 . T . PASS END=128476914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 128476915 . G . PASS END=128476915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 128476916 . G . PASS END=128476917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 128476918 . T . PASS END=128476918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:14,0 chr2 128476919 . G . PASS END=128476919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:14,0 chr2 128476920 . T . PASS END=128476920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 128476921 . G . PASS END=128476921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,382:0,15,255:13,0 chr2 128476922 . G . PASS END=128476922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr2 128476923 . C . PASS END=128476925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 128476926 . T . PASS END=128476926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:14,0 chr2 128476927 . C . PASS END=128476927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 128476928 . T . PASS END=128476929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128476930 . G . PASS END=128476930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 128476931 . C . PASS END=128476932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128476933 . G . PASS END=128476933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 128476934 . G . PASS END=128476936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128476937 . T . PASS END=128476937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr2 128476938 . C . PASS END=128476938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128476939 . T . PASS END=128476939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 128476940 . G . PASS END=128476941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128476942 . T . LowGQ END=128476942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,372:35,0,255:12,0 chr2 128476943 . G . PASS END=128476948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 128476949 . G . PASS END=128476949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 128476950 . A . PASS END=128476950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 128476951 . G . PASS END=128476951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,457:0,11,255:11,0 chr2 128476952 . G . PASS END=128476952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 128476953 . T . PASS END=128476954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 128476955 . C . PASS END=128476955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 128476956 . G . PASS END=128476956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr2 128476957 . G . PASS END=128476957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:12,0 chr2 128476958 . G . PASS END=128476958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr2 128476959 . G . PASS END=128476965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 128476966 . T . PASS END=128476966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr2 128476967 . G . PASS END=128476969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr2 128476970 . T . PASS END=128476970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,429:0,6,255:10,0 chr2 128476971 . G . PASS END=128476973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 128476974 . A . PASS END=128476974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 128476975 . C . PASS END=128476977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 128476978 . T . LowGQ END=128476978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,382:0,0,255:10,0 chr2 128476979 . G . PASS END=128476984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 128476985 . G . PASS END=128476996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,315:0,20,255:9,0 chr2 128476997 . A . PASS END=128476997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 128476998 . G . PASS END=128477000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 128477001 . C . PASS END=128477044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,366:0,33,255:13,0 chr2 128477045 . A . PASS END=128477065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:18,0 chr2 128477066 . T . PASS END=128477066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 128477067 . T . PASS END=128477074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:19,0 chr2 128477075 . G . PASS END=128477075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 128477076 . G . PASS END=128477077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128477078 . G . PASS END=128477088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 128477089 . T . PASS END=128477089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:19,0 chr2 128477090 . G . PASS END=128477090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 128477091 . C . PASS END=128477105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 128477106 . C . PASS END=128477111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 128477112 . A . PASS END=128477126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 128477127 . A . PASS END=128477127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128477128 . G . PASS END=128477135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 128477136 . T . PASS END=128477136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128477137 . C . PASS END=128477148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 128477149 . C . PASS END=128477150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 128477151 . T . PASS END=128477154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128477155 . G . PASS END=128477161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 128477162 . G . PASS END=128477163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:19,0 chr2 128477164 . C . PASS END=128477170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128477171 . T . PASS END=128477171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 128477172 . C . PASS END=128477187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:21,0 chr2 128477188 . C . PASS END=128477188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 128477189 . C . PASS END=128477196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 128477197 . A . PASS END=128477197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 128477198 . T . PASS END=128477200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128477201 . C . PASS END=128477201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 128477202 . T . PASS END=128477204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 128477205 . G . PASS END=128477240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,668:0,47,255:19,0 chr2 128477241 . C . PASS END=128477248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128477249 . T . PASS END=128477249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 128477250 . T . PASS END=128477265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 128477266 . C . PASS END=128477284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:19,0 chr2 128477285 . A . PASS END=128477288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr2 128477289 . A . PASS END=128477289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 128477290 . G . PASS END=128477308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,845:0,62,255:25,0 chr2 128477309 . A . PASS END=128477310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,821:0,58,255:21,0 chr2 128477311 . C . PASS END=128477390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:26,0 chr2 128477391 . A . PASS END=128477391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 128477392 . C . PASS END=128477392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr2 128477393 . C . PASS END=128477393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 128477394 . C . PASS END=128477394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 128477395 . G . PASS END=128477395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 128477396 . G . PASS END=128477428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,870:0,66,255:24,0 chr2 128477429 . C . PASS END=128477448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 128477449 . A . PASS END=128477451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128477452 . T . PASS END=128477462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,729:0,47,255:19,0 chr2 128477463 . G . PASS END=128477463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,637:0,26,255:15,0 chr2 128477464 . C . PASS END=128477508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,635:0,40,255:19,0 chr2 128477509 . C . PASS END=128477509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 128477510 . C . PASS END=128477521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,621:0,40,255:17,0 chr2 128477522 . G . PASS END=128477522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 128477523 . T . PASS END=128477547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:15,0 chr2 128477548 . T . PASS END=128477550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 128477551 . G . PASS END=128477629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,582:0,45,255:19,0 chr2 128477630 . C . PASS END=128477709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,864:0,62,255:26,0 chr2 128477710 . C . PASS END=128477710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128477711 . C . PASS END=128477741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:26,0 chr2 128477742 . A . PASS END=128477742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 128477743 . G . PASS END=128477743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 128477744 . G . PASS END=128477744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 128477745 . C . PASS END=128477750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:25,0 chr2 128477751 . T . PASS END=128477751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:23,0 chr2 128477752 . T . PASS END=128477781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr2 128477782 . G . PASS END=128477782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 128477783 . G . PASS END=128477784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 128477785 . T . PASS END=128477785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 128477786 . G . PASS END=128477788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 128477789 . G . PASS END=128477789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 128477790 . C . PASS END=128477797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:24,0 chr2 128477798 . A . PASS END=128477798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 128477799 . A . PASS END=128477800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 128477801 . C . PASS END=128477801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 128477802 . T . PASS END=128477813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,876:0,72,255:24,0 chr2 128477814 . A . PASS END=128477815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 128477816 . A . PASS END=128477856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,70,255:26,0 chr2 128477857 . G . PASS END=128477857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 128477858 . G . PASS END=128477859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 128477860 . G . PASS END=128477872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr2 128477873 . G . PASS END=128477873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 128477874 . A . PASS END=128477875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 128477876 . G . PASS END=128477898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr2 128477899 . T . PASS END=128477899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 128477900 . T . PASS END=128477913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:22,0 chr2 128477914 . T . PASS END=128477914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 128477915 . C . PASS END=128477920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 128477921 . T . PASS END=128477921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 128477922 . A . PASS END=128477927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 128479410 . C . PASS END=128479562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:68:0,120,1800:0,169,255:40,0 chr2 128480165 . C . PASS END=128480304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:48:0,120,1800:0,121,255:40,0 chr2 128480532 . C . PASS END=128480618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,111,1665:0,137,255:40,0 chr2 128480827 . C . PASS END=128480921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,123,255:40,0 chr2 128481907 . C . PASS END=128482017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:42:0,99,1485:0,125,255:40,0 chr2 128482461 . C . PASS END=128482539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:64:0,120,1800:0,180,255:40,0 chr2 128482635 . C . PASS END=128482789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:95:50:0,95,1755:0,95,255:40,0 chr2 128484225 . A . PASS END=128484351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:46:0,120,1800:0,122,255:40,0 chr2 128495579 . T . PASS END=128495607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,169,255:40,0 chr2 128495608 . G . PASS END=128495628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,153,255:40,0 chr2 128513051 . C . PASS END=128513079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,221,255:40,0 chr2 128520601 . T . PASS END=128520733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,115,1783:0,115,255:40,0 chr2 128522047 . T . PASS END=128522531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:37:0,84,1307:0,84,255:40,0 chr2 128522532 . C . PASS END=128522533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:57:35:0,57,855:0,105,255:19,0 chr2 128522534 . C . PASS END=128522537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:20,0 chr2 128522538 . C . PASS END=128522553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:18,0 chr2 128522748 . C . PASS END=128522754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:38:0,84,1325:0,84,255:36,0 chr2 128522755 . A . PASS END=128522755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1277:0,78,255:35,0 chr2 128522756 . T . PASS END=128522843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:38:0,81,1197:0,81,255:40,0 chr2 128525763 . C . PASS END=128525867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:49:0,120,1800:0,131,255:40,0 chr2 128526507 . A . PASS END=128526536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:74:0,120,1800:0,206,255:40,0 chr2 128526537 . T . PASS END=128526566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:81:78:0,81,1215:0,208,255:40,0 chr2 128526567 . T . PASS END=128526567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:66:78:0,66,990:0,218,255:21,0 chr2 128526568 . A . PASS END=128526572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:42:67:0,42,630:0,201,255:18,0 chr2 128526573 . G . PASS END=128526575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:33:67:0,33,495:0,201,255:12,0 chr2 128528352 . C . PASS END=128528555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:34:0,84,1260:0,95,255:40,0 chr2 128605681 . T . PASS END=128605759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:43:0,111,1588:0,113,255:40,0 chr2 128608164 . C . PASS END=128608225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:94:32:0,94,1051:0,94,255:40,0 chr2 128608226 . C . PASS END=128608234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:45:0,81,1215:0,125,255:36,0 chr2 128608235 . A . PASS END=128608249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:60:43:0,60,900:0,112,255:26,0 chr2 128608250 . G . PASS END=128608259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:45:42:0,45,675:0,113,255:17,0 chr2 128610499 . C . PASS END=128610679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,120,1800:0,126,255:40,0 chr2 128615602 . C . PASS END=128615654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,552:0,48,255:18,0 chr2 128615655 . T . PASS END=128615660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr2 128615661 . C . PASS END=128615670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:14,0 chr2 128615671 . C . PASS END=128615674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 128615884 . A . PASS END=128615903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,922:0,66,255:26,0 chr2 128615904 . G . PASS END=128615963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1233:0,86,255:36,0 chr2 128615964 . C . PASS END=128615973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:31,0 chr2 128615974 . G . PASS END=128615998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 128622668 . T . PASS END=128622750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:80:32:0,80,1140:0,80,255:40,0 chr2 128622751 . A . PASS END=128622751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr2 128622752 . A . PASS END=128622761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 128622762 . A . PASS END=128622762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1070:0,49,255:29,0 chr2 128622763 . C . PASS END=128622765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:29,0 chr2 128622766 . T . PASS END=128622766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr2 128622767 . C . PASS END=128622774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 128622775 . G . PASS END=128622779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1063:0,74,255:26,0 chr2 128624474 . C . PASS END=128624570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,106,1800:0,106,255:40,0 chr2 128624719 . C . PASS END=128624853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,99,1326:0,99,255:40,0 chr2 128627028 . C . PASS END=128627118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:41:0,93,1395:0,97,255:40,0 chr2 128628388 . C . PASS END=128628502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:97:43:0,97,1543:0,97,255:40,0 chr2 128628823 . C . PASS END=128628924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:32:0,90,1227:0,91,255:40,0 chr2 128628925 . A . PASS END=128628933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr2 128630560 . C . PASS END=128630651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:34:0,95,1243:0,95,255:40,0 chr2 128631402 . T . PASS END=128631404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 128631405 . G . PASS END=128631415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:26,0 chr2 128631416 . G . PASS END=128631421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr2 128631422 . A . PASS END=128631422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 128631423 . G . PASS END=128631424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 128631425 . A . PASS END=128631425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 128631426 . A . PASS END=128631433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 128631434 . C . PASS END=128631434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 128631435 . T . PASS END=128631435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 128631436 . G . PASS END=128631436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 128631437 . T . PASS END=128631440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr2 128631441 . A . PASS END=128631441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 128631442 . A . PASS END=128631447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:30:0,87,1305:0,90,255:34,0 chr2 128631448 . A . PASS END=128631448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:33,0 chr2 128631449 . G . PASS END=128631495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1227:0,89,255:36,0 chr2 128631496 . T . PASS END=128631496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:31,0 chr2 128631497 . C . PASS END=128631532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1081:0,85,255:36,0 chr2 128631533 . A . PASS END=128631533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:32,0 chr2 128631534 . G . PASS END=128631882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1247:0,81,255:40,0 chr2 128632523 . A . PASS END=128632595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:89:51:0,89,1510:0,89,255:40,0 chr2 128642971 . A . PASS END=128642972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:32:22:0,32,540:0,32,255:20,0 chr2 128642973 . G . PASS END=128642973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 128642974 . C . PASS END=128642974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,688:0,19,255:20,0 chr2 128642975 . C . LowGQ END=128642975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,499:42,0,255:19,0 chr2 128642976 . G . PASS END=128642978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr2 128642979 . C . LowGQ END=128642979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,9:26:0:26:0,0,310:174,0,255:17,0 chr2 128642980 . G . PASS END=128642984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,714:0,61,255:26,0 chr2 128642985 . A . LowGQ END=128642985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,11:26:0:26:0,0,273:141,0,255:14,0 chr2 128642986 . G . PASS END=128642990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,878:0,64,255:26,0 chr2 128642991 . C . LowGQ END=128642991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,595:22,0,255:22,0 chr2 128642992 . G . PASS END=128642992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 128642993 . G . PASS END=128642993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:25,0 chr2 128642994 . C . PASS END=128642994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,709:0,9,255:24,0 chr2 128642995 . G . PASS END=128642997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:29,0 chr2 128642998 . G . PASS END=128642998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:28,0 chr2 128642999 . C . PASS END=128642999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:20:30:0,20,850:0,20,255:28,0 chr2 128643000 . G . PASS END=128643000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr2 128643001 . G . PASS END=128643001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:29,0 chr2 128643002 . C . PASS END=128643002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,911:0,57,255:27,0 chr2 128643003 . G . PASS END=128643004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 128643005 . G . PASS END=128643006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,981:0,60,255:29,0 chr2 128643007 . C . PASS END=128643007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,897:0,32,255:27,0 chr2 128643008 . G . PASS END=128643009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:33:0,92,1288:0,92,255:33,0 chr2 128643010 . T . PASS END=128643010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1024:0,52,255:32,0 chr2 128643011 . G . PASS END=128643013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,108,1620:0,114,255:40,0 chr2 128643014 . T . PASS END=128643014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1213:0,73,255:37,0 chr2 128643015 . G . PASS END=128643030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:41:0,93,1465:0,93,255:40,0 chr2 128643031 . C . PASS END=128643130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1215:0,89,255:40,0 chr2 128643131 . G . PASS END=128643138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 128643139 . C . PASS END=128643139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr2 128643140 . G . PASS END=128643150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:25,0 chr2 128643151 . G . PASS END=128643152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 128643153 . A . PASS END=128643153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:18,0 chr2 128643154 . G . PASS END=128643157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 128643158 . C . PASS END=128643161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 128643162 . C . PASS END=128643162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 128643163 . G . PASS END=128643163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 128643164 . A . PASS END=128643169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 128643170 . T . PASS END=128643170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:16,0 chr2 128643171 . G . PASS END=128643173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 128643174 . C . PASS END=128643174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:15,0 chr2 128643175 . T . PASS END=128643185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 128643186 . A . PASS END=128643214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr2 128643215 . A . PASS END=128643217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 128643218 . C . PASS END=128643227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr2 128643228 . G . PASS END=128643228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr2 128643229 . C . PASS END=128643229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 128643230 . T . PASS END=128643232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 128643233 . C . PASS END=128643242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 128643243 . T . PASS END=128643249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr2 128643250 . A . PASS END=128643258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:7:0,15,225:0,21,211:6,0 chr2 128643259 . G . PASS END=128643298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:1:3:0,1,49:0,1,49:3,0 chr2 128643299 . G . PASS END=128643332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:5,0 chr2 128643333 . G . PASS END=128643347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 128643348 . C . PASS END=128643349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 128643350 . G . PASS END=128643350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 128643351 . G . PASS END=128643351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 128643352 . G . PASS END=128643357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,242:7,0 chr2 128643358 . G . PASS END=128643358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:5,0 chr2 128643359 . G . PASS END=128643372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 128643373 . G . PASS END=128643373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 128643374 . A . PASS END=128643378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 128643379 . C . PASS END=128643379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 128643380 . C . PASS END=128643381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 128643382 . A . PASS END=128643382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 128643383 . C . PASS END=128643387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 128643388 . T . PASS END=128643388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:8,0 chr2 128643389 . C . PASS END=128643389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 128643390 . T . PASS END=128643390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 128643391 . C . PASS END=128643406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr2 128643407 . C . PASS END=128643407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 128643408 . T . PASS END=128643437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,276:0,30,255:10,0 chr2 128643438 . T . PASS END=128643442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 128643443 . C . PASS END=128643446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 128643447 . T . PASS END=128643448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 128643449 . C . PASS END=128643450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 128643451 . T . PASS END=128643503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 128643504 . G . PASS END=128643504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 128643505 . G . PASS END=128643520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 128643521 . C . PASS END=128643523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr2 128643524 . A . PASS END=128643529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 128643530 . C . PASS END=128643597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:6,0 chr2 128643598 . A . PASS END=128643619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 128643620 . G . PASS END=128643620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 128643621 . C . PASS END=128643629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 128643630 . T . PASS END=128643646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:6:0,15,225:0,18,202:6,0 chr2 128643647 . C . PASS END=128643647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 128643648 . G . PASS END=128643656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr2 128643657 . G . LowGQ END=128643657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 128643658 . G . PASS END=128643679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:5,0 chr2 128643680 . C . LowGQ END=128643680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 128643681 . A . PASS END=128643685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 128699580 . C . PASS END=128699580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:8:34:0,8,1092:0,8,255:31,0 chr2 128699581 . T . PASS END=128699581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:31,0 chr2 128699582 . A . PASS END=128699582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1131:0,33,255:32,0 chr2 128699583 . G . PASS END=128699583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 128699584 . A . LowGQ END=128699584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:0:35:0,0,959:12,0,255:32,0 chr2 128699585 . C . PASS END=128699585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1186:0,36,255:32,0 chr2 128699586 . T . PASS END=128699586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:17:35:0,17,1023:0,17,255:31,0 chr2 128699587 . T . LowGQ END=128699587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:0:35:0,0,1086:11,0,255:32,0 chr2 128699588 . T . PASS END=128699588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:32,0 chr2 128699589 . T . PASS END=128699589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:27:35:0,27,1090:0,27,255:32,0 chr2 128699590 . T . PASS END=128699590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:19:35:0,19,1062:0,19,255:32,0 chr2 128699591 . C . PASS END=128699591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:32,0 chr2 128699592 . C . PASS END=128699592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:32,0 chr2 128699593 . T . PASS END=128699593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1163:0,55,255:32,0 chr2 128699594 . T . PASS END=128699594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:32,0 chr2 128699595 . T . PASS END=128699595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 128699596 . C . PASS END=128699596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1149:0,33,255:32,0 chr2 128699597 . G . PASS END=128699598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1151:0,71,255:32,0 chr2 128699599 . T . PASS END=128699599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1139:0,47,255:32,0 chr2 128699600 . T . PASS END=128699600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr2 128699601 . C . PASS END=128699601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1257:0,89,255:33,0 chr2 128699602 . A . PASS END=128699602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:33,0 chr2 128699603 . A . PASS END=128699604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:49:35:0,49,1089:0,49,255:33,0 chr2 128699605 . T . PASS END=128699606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:35:0,72,1111:0,72,255:33,0 chr2 128699607 . G . PASS END=128699608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:33,0 chr2 128699609 . A . PASS END=128699609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1143:0,36,255:33,0 chr2 128699610 . C . PASS END=128699611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1180:0,50,255:33,0 chr2 128699612 . C . PASS END=128699612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:34,0 chr2 128699613 . T . PASS END=128699613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:30:36:0,30,1135:0,30,255:34,0 chr2 128699614 . T . PASS END=128699615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:34,0 chr2 128699616 . T . PASS END=128699616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1072:0,36,255:33,0 chr2 128699617 . T . PASS END=128699617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1126:0,61,255:34,0 chr2 128699618 . T . PASS END=128699618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1278:0,92,255:34,0 chr2 128699619 . G . PASS END=128699620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:34,0 chr2 128699621 . C . PASS END=128699621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1294:0,92,255:33,0 chr2 128699622 . A . PASS END=128699622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:33,0 chr2 128699623 . G . PASS END=128699623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1168:0,39,255:33,0 chr2 128699624 . T . PASS END=128699624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1249:0,64,255:34,0 chr2 128699625 . C . PASS END=128699625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1296:0,80,255:34,0 chr2 128699626 . C . PASS END=128699627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1238:0,72,255:34,0 chr2 128699628 . G . PASS END=128699629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1327:0,80,255:34,0 chr2 128699630 . T . PASS END=128699630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1213:0,56,255:34,0 chr2 128699631 . C . PASS END=128699738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:37:0,93,1379:0,93,255:40,0 chr2 128699998 . C . PASS END=128700111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:55:0,120,1800:0,147,255:40,0 chr2 128703030 . C . PASS END=128703133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:29:0,83,1072:0,83,255:40,0 chr2 128707443 . C . PASS END=128707448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 128707449 . C . PASS END=128707451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 128707452 . G . PASS END=128707453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1141:0,80,255:29,0 chr2 128707454 . A . PASS END=128707454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:28,0 chr2 128707455 . C . PASS END=128707568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1169:0,80,255:40,0 chr2 128707734 . C . PASS END=128707955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:33:0,90,1206:0,91,255:40,0 chr2 128707956 . C . PASS END=128707972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:25:0,66,990:0,75,255:24,0 chr2 128707973 . G . PASS END=128707973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 128707974 . G . PASS END=128707982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 128712560 . C . PASS END=128712563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 128712564 . A . PASS END=128712564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 128712565 . A . PASS END=128712566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 128712567 . T . PASS END=128712567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 128712568 . G . PASS END=128712572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,946:0,78,255:26,0 chr2 128712573 . C . PASS END=128712581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr2 128712582 . C . PASS END=128712582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 128712583 . A . PASS END=128712583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128712584 . T . PASS END=128712584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,937:0,42,255:25,0 chr2 128712585 . T . PASS END=128712587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 128712588 . T . PASS END=128712588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr2 128712589 . T . PASS END=128712589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 128712590 . C . PASS END=128712590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 128712591 . T . PASS END=128712594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 128712595 . T . PASS END=128712595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:27,0 chr2 128712596 . C . PASS END=128712597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 128712598 . T . PASS END=128712598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,944:0,73,255:28,0 chr2 128712599 . C . PASS END=128712604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr2 128712605 . C . PASS END=128712606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 128712607 . T . PASS END=128712613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 128712614 . C . PASS END=128712615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:25,0 chr2 128712616 . G . PASS END=128712618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 128712619 . A . PASS END=128712620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1102:0,77,255:27,0 chr2 128712621 . G . PASS END=128712623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 128712624 . A . PASS END=128712624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr2 128712625 . G . PASS END=128712625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 128712626 . G . PASS END=128712626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 128712627 . G . PASS END=128712649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 128712650 . C . PASS END=128712665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1061:0,71,255:26,0 chr2 128712666 . T . PASS END=128712666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128712667 . G . PASS END=128712670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 128712671 . G . PASS END=128712671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 128712672 . T . PASS END=128712672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1071:0,49,255:26,0 chr2 128712673 . G . PASS END=128712673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 128712674 . G . PASS END=128712674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 128712675 . T . PASS END=128712680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,986:0,81,255:27,0 chr2 128712681 . T . PASS END=128712681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 128712682 . G . PASS END=128712683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128712684 . A . PASS END=128712686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,925:0,67,255:26,0 chr2 128712687 . G . PASS END=128712911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:29:0,81,1215:0,84,255:40,0 chr2 128712912 . T . PASS END=128712912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:31,0 chr2 128712913 . T . PASS END=128712918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,104,255:34,0 chr2 128735559 . C . PASS END=128735663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,100,1582:0,100,255:40,0 chr2 128744359 . C . PASS END=128744359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 128744360 . C . PASS END=128744380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:19,0 chr2 128744381 . G . PASS END=128744392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:26,0 chr2 128744393 . G . PASS END=128744395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr2 128744396 . G . PASS END=128744396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 128744397 . T . PASS END=128744504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1033:0,83,255:37,0 chr2 128744505 . C . PASS END=128744520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:26:0,60,886:0,64,255:26,0 chr2 128744521 . T . PASS END=128744536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,717:0,50,255:19,0 chr2 128747138 . C . PASS END=128747138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:23,0 chr2 128747139 . T . PASS END=128747139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 128747140 . G . PASS END=128747140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 128747141 . A . PASS END=128747141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:23,0 chr2 128747142 . A . PASS END=128747144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,832:0,39,255:24,0 chr2 128747145 . C . PASS END=128747145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 128747146 . T . PASS END=128747147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:26,0 chr2 128747148 . T . PASS END=128747148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 128747149 . C . PASS END=128747153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1102:0,54,255:31,0 chr2 128747154 . A . PASS END=128747154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:30,0 chr2 128747155 . G . PASS END=128747429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:30:0,81,1251:0,81,255:40,0 chr2 128747430 . C . PASS END=128747440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr2 128750761 . C . PASS END=128750767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 128750768 . C . PASS END=128750882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:82:34:0,82,1217:0,82,255:40,0 chr2 128753924 . C . PASS END=128754055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:81:37:0,81,1215:0,111,255:40,0 chr2 128754056 . A . PASS END=128754065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:29:0,63,945:0,83,255:25,0 chr2 128757315 . C . PASS END=128757419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,108,1620:0,110,255:40,0 chr2 128757630 . C . PASS END=128757720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:45:0,120,1800:0,120,255:40,0 chr2 128757881 . C . PASS END=128758020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1169:0,80,255:40,0 chr2 128758021 . T . PASS END=128758028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,74,255:25,0 chr2 128767843 . C . PASS END=128767967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:32:0,84,1180:0,85,255:40,0 chr2 128770604 . C . PASS END=128770615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,607:0,43,255:19,0 chr2 128770616 . G . PASS END=128770662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,707:0,60,255:25,0 chr2 128770663 . G . PASS END=128770671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 128770672 . T . PASS END=128770686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,1000:0,68,255:25,0 chr2 128770687 . T . PASS END=128770697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 128770698 . G . PASS END=128770717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:18:0,42,630:0,53,255:19,0 chr2 128770718 . A . PASS END=128770728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:13,0 chr2 128772377 . C . PASS END=128772408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:47:0,120,1800:0,130,255:40,0 chr2 128772409 . G . PASS END=128772488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:33:0,96,1440:0,99,255:40,0 chr2 128773962 . C . PASS END=128773962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 128773963 . C . PASS END=128774109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:28:0,81,1150:0,84,255:40,1 chr2 128774110 . C . PASS END=128774110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:30,0 chr2 128774111 . T . PASS END=128774121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:30,0 chr2 128775254 . C . PASS END=128775255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 128775256 . T . PASS END=128775264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 128775265 . C . PASS END=128775265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 128775266 . C . PASS END=128775272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 128775273 . A . PASS END=128775273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 128775274 . A . PASS END=128775315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,490:0,42,255:18,0 chr2 128775316 . T . PASS END=128775316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 128775317 . C . PASS END=128775326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,682:0,54,255:18,0 chr2 128775327 . G . PASS END=128775331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128775332 . G . PASS END=128775332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 128775333 . G . PASS END=128775335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 128775336 . G . PASS END=128775341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 128775342 . A . PASS END=128775351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:26,0 chr2 128775352 . G . PASS END=128775353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128775354 . G . PASS END=128775391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr2 128775392 . A . PASS END=128775394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 128775395 . A . PASS END=128775395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,966:0,56,255:26,0 chr2 128775396 . G . PASS END=128775398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 128775399 . T . PASS END=128775399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 128775400 . C . PASS END=128775407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr2 128775408 . T . PASS END=128775408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 128775409 . C . PASS END=128775410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 128775411 . T . PASS END=128775411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 128775412 . C . PASS END=128775418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:30,0 chr2 128775419 . C . PASS END=128775419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:28,0 chr2 128775420 . T . PASS END=128775422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 128775423 . A . PASS END=128775423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 128775424 . G . PASS END=128775437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1088:0,90,255:30,0 chr2 128775438 . C . PASS END=128775438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 128775439 . T . PASS END=128775450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 128775451 . T . PASS END=128775451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 128775452 . G . PASS END=128775452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 128775453 . G . PASS END=128775453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 128775454 . C . PASS END=128775458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 128775459 . A . PASS END=128775459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr2 128775460 . C . PASS END=128775460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 128775461 . T . PASS END=128775461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 128775462 . T . PASS END=128775467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1072:0,90,255:30,0 chr2 128775468 . T . PASS END=128775468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,904:0,73,255:27,0 chr2 128775469 . C . PASS END=128775471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 128775472 . G . PASS END=128775472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 128775473 . A . PASS END=128775473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 128775474 . C . PASS END=128775474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 128775475 . C . PASS END=128775486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 128775487 . T . PASS END=128775488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 128775489 . A . PASS END=128775489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,914:0,23,255:23,0 chr2 128783755 . C . PASS END=128783759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:33,0 chr2 128783760 . G . PASS END=128783760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr2 128783761 . C . PASS END=128783853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1158:0,80,255:40,0 chr2 128783854 . G . PASS END=128783861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 128783862 . C . PASS END=128783868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 128783869 . C . PASS END=128783872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 128784666 . C . PASS END=128784709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:12,0 chr2 128784710 . C . PASS END=128784720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr2 128784721 . T . PASS END=128784729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr2 128784730 . G . PASS END=128784737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:7:0,9,135:0,21,197:3,0 chr2 128848932 . A . PASS END=128849044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1215:0,86,255:40,0 chr2 128849045 . A . PASS END=128849072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:27,0 chr2 128855003 . G . PASS END=128855003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:27,0 chr2 128855004 . A . PASS END=128855005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,958:0,84,255:28,0 chr2 128855006 . T . PASS END=128855006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,803:0,50,255:25,0 chr2 128855007 . T . PASS END=128855014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 128855015 . A . PASS END=128855015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 128855016 . A . PASS END=128855016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:28,0 chr2 128855017 . A . PASS END=128855136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1215:0,87,255:40,0 chr2 128855137 . A . PASS END=128855138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:26,0 chr2 128860653 . C . PASS END=128860668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,102,1389:0,104,255:39,0 chr2 128861506 . T . PASS END=128861588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:57:0,120,1800:0,172,255:40,0 chr2 128865512 . G . PASS END=128865642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:92:47:0,92,1676:0,92,255:40,0 chr2 128867208 . A . PASS END=128867320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:48:0,120,1774:0,120,255:40,0 chr2 128870658 . A . PASS END=128870659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,762:0,63,255:26,0 chr2 128870660 . C . PASS END=128870660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:25,0 chr2 128870661 . C . PASS END=128870662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr2 128870663 . A . PASS END=128870770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:83:28:0,83,1009:0,83,255:40,0 chr2 128870771 . G . PASS END=128870807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,155,255:40,0 chr2 128870808 . T C, 224.57 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,30,0:0,29,0:175:262,178,0,2280,178,2280:255,183,0:0,0:2.2457e+02,1.7457e+02,0.0000e+00,4.5000e+02,2.0934e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,36:0,0,30,29 chr2 128870809 . T . PASS END=128870832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:41:0,93,1386:0,93,255:40,0 chr2 128872698 . A . PASS END=128872784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:39:0,81,1215:0,96,255:40,0 chr2 128872785 . C . PASS END=128872785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 128872786 . A . PASS END=128872794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 128873839 . G . PASS END=128873917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:56:0,120,1800:0,129,255:40,0 chr2 128877930 . A . PASS END=128877976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,107,1761:0,107,255:40,0 chr2 128877977 . A . PASS END=128878013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,171,255:40,0 chr2 128878014 . G A, 220.63 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,26,0:0,32,0:171:258,174,0,2163,174,2163:255,174,0:0,0:2.2063e+02,1.7063e+02,0.0000e+00,4.5000e+02,2.0540e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,32:0,0,30,28 chr2 128878015 . G . PASS END=128878030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,160,255:40,0 chr2 128878773 . A . PASS END=128878872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,125,255:40,0 chr2 128880760 . A . PASS END=128880820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,161,255:40,0 chr2 128884935 . T . PASS END=128885026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:61:0,120,1800:0,167,255:40,0 chr2 128886603 . T . PASS END=128886603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 128886604 . C . PASS END=128886605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,725:0,30,255:22,0 chr2 128886606 . G . PASS END=128886608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,834:0,78,255:26,0 chr2 128886609 . T . PASS END=128886618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:30,0 chr2 128886619 . A . PASS END=128886619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 128886620 . G . PASS END=128886634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1142:0,86,255:36,0 chr2 128886635 . T . PASS END=128886635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:34,0 chr2 128886636 . A . PASS END=128886672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1365:0,84,255:40,0 chr2 128886673 . T . PASS END=128886673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1164:0,68,255:40,0 chr2 128886674 . C . PASS END=128886734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1215:0,93,255:40,0 chr2 128886735 . C . PASS END=128886735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 128886736 . C . PASS END=128886737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 128886738 . G . PASS END=128886743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,913:0,65,255:25,0 chr2 128886744 . T . PASS END=128886747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,630:0,65,255:17,0 chr2 128886748 . A . PASS END=128886753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:39:22:0,39,585:0,58,255:13,0 chr2 128890715 . T . PASS END=128890834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:96:43:0,96,1440:0,119,255:40,0 chr2 128892450 . G . PASS END=128892535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,150,255:40,0 chr2 128892795 . A . PASS END=128892814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,169,255:40,0 chr2 128896291 . A . PASS END=128896426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,108,1577:0,114,255:40,0 chr2 128900668 . A . PASS END=128900799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,115,1521:0,115,255:40,0 chr2 128903377 . G . PASS END=128903384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 128903385 . A . PASS END=128903387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 128903388 . C . PASS END=128903388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 128903389 . T . PASS END=128903392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,800:0,66,255:26,0 chr2 128903393 . A . PASS END=128903400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:29,0 chr2 128903401 . A . PASS END=128903402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 128903403 . T . PASS END=128903495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:29:0,82,1034:0,82,255:40,1 chr2 128903496 . T . PASS END=128903496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr2 128903497 . A . PASS END=128903498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 128903499 . A . PASS END=128903499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,924:0,60,255:25,0 chr2 128903500 . A . PASS END=128903500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 128903501 . T . PASS END=128903501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 128903502 . C . PASS END=128903514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,976:0,81,255:27,0 chr2 128903515 . A . PASS END=128903515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 128903516 . C . PASS END=128903517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 128903518 . T . PASS END=128903528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,68,255:25,0 chr2 128903529 . A . PASS END=128903541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:22:0,45,720:0,45,255:19,0 chr2 128910358 . G . PASS END=128910359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 128910360 . T . PASS END=128910476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1091:0,84,255:40,0 chr2 128910477 . T . PASS END=128910478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:37:0,78,1170:0,111,255:26,0 chr2 128913063 . A . PASS END=128913161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,105,1575:0,113,255:40,0 chr2 128913966 . G . PASS END=128913989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:90:0,120,1800:0,244,255:40,0 chr2 128914826 . A . PASS END=128914920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:44:0,94,1530:0,94,255:40,0 chr2 128917088 . A . PASS END=128917266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:38:0,81,1215:0,98,255:40,0 chr2 128917267 . A . PASS END=128917267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1138:0,66,255:27,0 chr2 128917268 . G . PASS END=128917279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1178:0,83,255:28,0 chr2 128917280 . G . PASS END=128917282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:28:0,63,945:0,67,255:23,0 chr2 128917283 . T . PASS END=128917294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:20:0,42,630:0,48,255:18,0 chr2 128918034 . G . PASS END=128918050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1292:0,92,255:36,0 chr2 128918051 . T . PASS END=128918051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:34,0 chr2 128918052 . T . PASS END=128918165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:35:0,87,1288:0,87,255:40,0 chr2 128918712 . A . PASS END=128918842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:52:0,120,1800:0,141,255:40,0 chr2 128922304 . G . PASS END=128922399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:38:0,93,1395:0,98,255:40,0 chr2 128927862 . T . PASS END=128927964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,105,1575:0,117,255:40,0 chr2 128928779 . G . PASS END=128928858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,152,255:40,0 chr2 128930147 . C . PASS END=128930174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:44:0,116,1580:0,116,255:40,0 chr2 128930175 . A . PASS END=128930175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:62:55:0,62,1707:0,62,255:40,0 chr2 128930176 . T . PASS END=128930336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,126,255:40,0 chr2 128931355 . G . PASS END=128931356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 128931357 . G . PASS END=128931491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1031:0,81,255:40,0 chr2 128931492 . C . PASS END=128931501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:32:0,60,900:0,80,255:26,0 chr2 128931502 . A . PASS END=128931502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,914:0,40,255:21,0 chr2 128931503 . T . PASS END=128931513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,68,255:22,0 chr2 128932347 . G . PASS END=128932432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1050:0,82,255:40,0 chr2 128934388 . C . PASS END=128934388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr2 128934389 . C . PASS END=128934399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1451:0,104,255:40,0 chr2 128934400 . T C, 49.96 PASS DP=47;MQ=250.00;MQRankSum=5.863;ReadPosRankSum=2.139;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,23,0:0.489,0.000:47:11,6,0:13,17,0:48:85,0,50,815,858,1673:255,0,255:22,0:4.9962e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,13,10:10,14,10,13 chr2 128934401 . G . PASS END=128934437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,120,1800:0,141,255:40,0 chr2 128934438 . T . PASS END=128934472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,115,1800:0,115,255:40,0 chr2 128935406 . G . PASS END=128935494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,141,255:40,0 chr2 128936042 . G . PASS END=128936143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:69:0,120,1800:0,207,255:40,0 chr2 128937360 . C . PASS END=128937444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:81:0,120,1800:0,213,255:40,0 chr2 128938464 . G . PASS END=128938639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:29:0,84,1260:0,87,255:40,0 chr2 128938640 . T . PASS END=128938646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:38:0,72,1080:0,84,255:26,0 chr2 128939704 . A . PASS END=128939717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:34:0,88,1114:0,88,255:38,0 chr2 128939718 . T . PASS END=128939718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1327:0,73,255:37,0 chr2 128939719 . C . PASS END=128939856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:36:0,92,1280:0,92,255:40,0 chr2 128939857 . C . PASS END=128939857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1241:0,61,255:30,0 chr2 128939858 . A . PASS END=128939864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:34:0,81,1215:0,92,255:30,0 chr2 128941249 . T . PASS END=128941363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:36:0,80,1274:0,80,255:40,0 chr2 128944257 . G . PASS END=128944279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:98:51:0,98,1709:0,98,255:40,0 chr2 128944280 . T . PASS END=128944373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:58:0,120,1800:0,144,255:40,0 chr2 128945023 . T . PASS END=128945160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:36:0,84,1260:0,103,255:40,0 chr2 128945161 . G . PASS END=128945172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:23,0 chr2 128945173 . G . PASS END=128945175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 128945176 . C . PASS END=128945188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,992:0,68,255:26,0 chr2 128947291 . G . PASS END=128947316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,175,255:40,0 chr2 129025736 . C . PASS END=129025742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 129025743 . T . PASS END=129025743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 129025744 . T . PASS END=129025755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 129025756 . G . PASS END=129025797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,321:0,30,255:13,0 chr2 129025798 . C . PASS END=129025798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 129025799 . A . PASS END=129025799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 129025800 . T . PASS END=129025800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 129025801 . C . PASS END=129025802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 129025803 . T . PASS END=129025803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 129025804 . C . PASS END=129025815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr2 129025816 . C . PASS END=129025816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 129025817 . C . PASS END=129025831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 129025832 . C . PASS END=129025856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,529:0,42,255:16,0 chr2 129025857 . A . PASS END=129025858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 129025859 . G . PASS END=129025900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr2 129025901 . C . PASS END=129025911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 129025912 . G . PASS END=129025965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,527:0,41,255:19,0 chr2 129025966 . G . PASS END=129025972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 129025973 . G . PASS END=129025985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 129025986 . A . PASS END=129025986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:14,0 chr2 129025987 . C . PASS END=129025997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:16,0 chr2 129025998 . C . PASS END=129025998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 129025999 . C . PASS END=129026003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:17,0 chr2 129026004 . C . PASS END=129026004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 129026005 . G . PASS END=129026009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr2 129026010 . C . PASS END=129026010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,823:0,23,255:22,0 chr2 129026011 . T . PASS END=129026011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 129026012 . A . PASS END=129026012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,884:0,29,255:24,0 chr2 129026013 . T . PASS END=129026026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,955:0,68,255:26,0 chr2 129026027 . G . PASS END=129026027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr2 129026028 . G . PASS END=129026045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,901:0,61,255:25,0 chr2 129026046 . T . PASS END=129026046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:24,0 chr2 129026047 . T . PASS END=129026050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr2 129026051 . C . PASS END=129026057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 129026058 . T . PASS END=129026066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 129026067 . T . PASS END=129026067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:21,0 chr2 129026068 . A . PASS END=129026076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,923:0,64,255:23,0 chr2 129026077 . T . PASS END=129026077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:21,0 chr2 129026078 . G . PASS END=129026082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 129026083 . G . PASS END=129026083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 129026084 . G . PASS END=129026089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 129026090 . G . PASS END=129026090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 129026091 . G . PASS END=129026092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 129026093 . C . PASS END=129026094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 129026095 . G . PASS END=129026099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 129026100 . A . PASS END=129026100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 129026101 . A . PASS END=129026104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 129026105 . G . PASS END=129026116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr2 129026117 . C . PASS END=129026118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 129026119 . G . PASS END=129026119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 129026120 . G . PASS END=129026121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 129026122 . T . PASS END=129026122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 129026123 . C . PASS END=129026133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,680:0,63,255:22,0 chr2 129026134 . T . PASS END=129026134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr2 129026135 . C . PASS END=129026146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 129026147 . C . PASS END=129026159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,44,255:15,0 chr2 129026160 . C . PASS END=129026163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 129026164 . C . PASS END=129026165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 129026166 . G . PASS END=129026166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 129026167 . G . PASS END=129026188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,729:0,47,255:19,0 chr2 129026189 . G . PASS END=129026189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 129026190 . C . PASS END=129026219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr2 129026220 . A . PASS END=129026221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 129026222 . C . PASS END=129026226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 129026227 . G T, 5.15 DRAGENSnpHardQUAL DP=21;MQ=42.59;MQRankSum=-0.352;ReadPosRankSum=2.663;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,3,0:0.143,0.000:21:12,0,0:6,3,0:5:38,0,45,107,607,714:53,0,255:16,0:5.1488e+00,1.5838e+00,4.9934e+01,1.0886e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,1,2:9,9,2,1 chr2 129026228 . G . PASS END=129026229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 129026230 . T . PASS END=129026234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 129026235 . G . PASS END=129026238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 129026239 . G . PASS END=129026264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,839:0,63,255:23,0 chr2 129026265 . T . PASS END=129026313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr2 129026314 . C . PASS END=129026315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr2 129026316 . T . PASS END=129026318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 129026319 . G . PASS END=129026323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 129026324 . G . PASS END=129026324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 129026325 . G . PASS END=129026331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 129026332 . G . PASS END=129026344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,1000:0,70,255:27,0 chr2 129026345 . A . PASS END=129026361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 129026362 . A . PASS END=129026362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 129026363 . C . PASS END=129026365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 129026366 . G . PASS END=129026371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 129026372 . C . PASS END=129026395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr2 129026396 . C . PASS END=129026406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 129026407 . A . PASS END=129026407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr2 129026408 . C . PASS END=129026408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:24,0 chr2 129026409 . A . PASS END=129026410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,781:0,39,255:24,0 chr2 129026411 . G . PASS END=129026411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:1:26:0,1,853:0,1,255:23,0 chr2 129026412 . G . PASS END=129026414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 129026415 . T . PASS END=129026415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:24,0 chr2 129026416 . C . PASS END=129026416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 129026417 . T . PASS END=129026417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 129026418 . C . PASS END=129026425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:25,0 chr2 129026426 . G . PASS END=129026427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:23,0 chr2 129026428 . T . PASS END=129026428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 129026429 . G . PASS END=129026429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 129026430 . A . PASS END=129026430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr2 129026431 . T . PASS END=129026444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,799:0,66,255:22,0 chr2 129075611 . C . PASS END=129075639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr2 129075640 . G . PASS END=129075640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 129075641 . C . PASS END=129075649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,354:0,33,255:12,0 chr2 129075650 . A . PASS END=129075650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 129075651 . C . PASS END=129075663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,346:0,36,255:13,0 chr2 129075664 . G . PASS END=129075665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:12,0 chr2 129075666 . T . PASS END=129075668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 129075669 . T . PASS END=129075669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 129075670 . G . PASS END=129075673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 129075674 . T . PASS END=129075675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 129075676 . G . PASS END=129075678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 129075679 . C . PASS END=129075679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:13,0 chr2 129075680 . C . PASS END=129075681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 129075682 . G . PASS END=129075682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr2 129075683 . T . PASS END=129075684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 129075685 . G . PASS END=129075685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,432:0,9,255:12,0 chr2 129075686 . G . PASS END=129075686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 129075687 . C . PASS END=129075687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 129075688 . G . PASS END=129075692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 129075693 . G . PASS END=129075693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:10,0 chr2 129075694 . C . PASS END=129075697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr2 129075698 . C . PASS END=129075698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 129075699 . A . PASS END=129075703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 129075704 . C . PASS END=129075708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 129075709 . G . PASS END=129075709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,435:0,11,255:13,0 chr2 129075710 . G . PASS END=129075710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 129075711 . T . PASS END=129075711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 129075712 . G . PASS END=129075712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 129075713 . G . PASS END=129075713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 129075714 . A . LowGQ END=129075714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:5,0,255:11,0 chr2 129075715 . G . PASS END=129075715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 129075716 . A . LowGQ END=129075716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,396:5,0,255:11,0 chr2 129075717 . A . PASS END=129075732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 129075733 . A . PASS END=129075733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,411:0,25,255:13,0 chr2 129075734 . G . PASS END=129075734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 129075735 . T . PASS END=129075735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr2 129075736 . C . PASS END=129075741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 129075742 . G . PASS END=129075742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 129075743 . C . PASS END=129075743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,382:0,25,255:12,0 chr2 129075744 . G . PASS END=129075761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 129075762 . T . PASS END=129075764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 129075765 . A . PASS END=129075765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 129075766 . C . PASS END=129075772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 129075773 . T . LowGQ END=129075773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:9,0 chr2 129075774 . G . PASS END=129075805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 129075806 . C . PASS END=129075807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 129075808 . T . PASS END=129075809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 129075810 . C . PASS END=129075828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 129075829 . G . PASS END=129075830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 129075831 . C . PASS END=129075831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 129075832 . G . PASS END=129075839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr2 129075840 . T . PASS END=129075848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 129075849 . T . PASS END=129075849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,0 chr2 129075850 . C . PASS END=129075853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 129075854 . T . PASS END=129075854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr2 129075855 . G . PASS END=129075858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr2 129075859 . G . PASS END=129075859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 129075860 . T . PASS END=129075864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 129075865 . G . PASS END=129075865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 129075866 . A . PASS END=129075876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr2 129075877 . G T, 3.85 DRAGENSnpHardQUAL DP=18;MQ=45.03;MQRankSum=-1.327;ReadPosRankSum=2.920;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,4,0:0.222,0.000:18:7,1,0:7,3,0:4:36,0,44,143,464,607:101,0,255:13,0:3.8539e+00,2.3043e+00,4.9429e+01,1.4524e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,2,2:6,8,1,3 chr2 129075878 . T . PASS END=129075878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 129075879 . C . PASS END=129075889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:19,0 chr2 129075890 . A . PASS END=129075896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 129075897 . A . PASS END=129075897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:19,0 chr2 129075898 . G . PASS END=129075911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr2 129075912 . C . PASS END=129075912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 129075913 . C . PASS END=129075929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:24,0 chr2 129075930 . A . PASS END=129075930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:22,0 chr2 129075931 . G . PASS END=129075960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,840:0,75,255:25,0 chr2 129075961 . T C, 34.34 PASS DP=25;MQ=50.20;MQRankSum=-3.998;ReadPosRankSum=2.856;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,13,0:0.520,0.000:25:7,5,0:5,8,0:34:69,0,44,465,421,886:255,0,255:8,0:3.4335e+01,1.6868e-03,4.7042e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,8,3,10:7,5,5,8 chr2 129075962 . G . PASS END=129075962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 129075963 . T . PASS END=129075963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:20,0 chr2 129075964 . G . PASS END=129075968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 129075969 . A . PASS END=129075998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:17,0 chr2 129075999 . C . PASS END=129076012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 129076013 . A . PASS END=129076013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 129076014 . G . PASS END=129076018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:18,0 chr2 129076019 . A . PASS END=129076019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 129076020 . G . PASS END=129076032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 129076033 . G . PASS END=129076033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:16,0 chr2 129076034 . T . PASS END=129076065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,527:0,41,255:17,0 chr2 129076066 . G . PASS END=129076071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 129076072 . C . PASS END=129076072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 129076073 . A . PASS END=129076088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 129076089 . T . PASS END=129076089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 129076090 . G . PASS END=129076098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 129076099 . C . PASS END=129076106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 129076107 . T . PASS END=129076122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:6:0,18,202:0,18,202:6,0 chr2 129076123 . G . PASS END=129076123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 129076124 . C . PASS END=129076135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr2 129076136 . A . PASS END=129076136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 129076137 . T . PASS END=129076137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:5,0 chr2 130737689 . A . PASS END=130737743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,86,255:35,0 chr2 130737744 . T . PASS END=130737747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:26,0 chr2 130737748 . G . PASS END=130737748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 130737749 . G . PASS END=130737749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 130737750 . A . PASS END=130737763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,86,255:29,0 chr2 130737764 . A . PASS END=130737802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr2 130737803 . G . PASS END=130737806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 130737807 . A . PASS END=130737811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:22,0 chr2 130737812 . T . PASS END=130737812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr2 130737813 . A . PASS END=130737838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr2 130737839 . T . PASS END=130737840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 130737841 . A . PASS END=130737847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 130737848 . A . PASS END=130737848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,709:0,52,255:20,0 chr2 130737849 . C . PASS END=130737859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 130737860 . G . PASS END=130737861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 130737862 . G . PASS END=130737864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 130737865 . T . PASS END=130737866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 130737867 . G . PASS END=130737888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr2 130737889 . G . PASS END=130738062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:84:31:0,84,1260:0,86,255:40,0 chr2 130738063 . A . PASS END=130738099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,165,255:40,0 chr2 130738100 . G A, 12.89 PASS DP=66;MQ=50.46;MQRankSum=-3.666;ReadPosRankSum=0.675;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,17,0:0.258,0.000:66:25,8,0:24,9,0:13:47,0,44,505,1663,2168:255,0,255:40,0:1.2893e+01,2.2909e-01,4.7354e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,25,6,11:26,23,11,6 chr2 130738101 . T . PASS END=130738162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:42:0,108,1491:0,112,255:40,0 chr2 130738163 . G A, 44.18 PASS DP=43;MQ=42.16;MQRankSum=3.000;ReadPosRankSum=2.582;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,34,0:0.791,0.000:43:2,18,0:7,16,0:8:78,0,4,1009,314,1322:255,0,212:6,0:4.4182e+01,8.0663e-01,7.7091e+00,4.5000e+02,3.4915e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,8,26:7,2,16,18 chr2 130738164 . C . PASS END=130738200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1257:0,89,255:37,0 chr2 130738201 . A . PASS END=130738202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 130738203 . C . PASS END=130738205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 130738206 . C . PASS END=130738236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr2 130738237 . A . PASS END=130738237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:26,0 chr2 130738238 . A . PASS END=130738238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 130738239 . G . PASS END=130738250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,83,255:26,0 chr2 130738251 . T . PASS END=130738254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 130738255 . T . PASS END=130738283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,939:0,75,255:25,0 chr2 130738284 . A . PASS END=130738284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 130738285 . A . PASS END=130738285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 130738286 . A . PASS END=130738286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr2 130738287 . C . PASS END=130738309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 130738310 . T . PASS END=130738323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 130738324 . G . PASS END=130738332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 130738333 . A . PASS END=130738334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 130738335 . C . PASS END=130738353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 130738354 . T . PASS END=130738354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr2 130738355 . T . PASS END=130738379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,901:0,72,255:25,0 chr2 130738380 . A . PASS END=130738380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 130738381 . T . PASS END=130738393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr2 130738394 . C . PASS END=130738394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,724:0,55,255:22,0 chr2 130738395 . T . PASS END=130738400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 130738401 . C . PASS END=130738401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 130738402 . T . PASS END=130738405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,795:0,69,255:23,0 chr2 130738406 . T . PASS END=130738406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 130738407 . T . PASS END=130738410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr2 130738411 . A . PASS END=130738411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 130738412 . A . PASS END=130738439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr2 130738440 . T . PASS END=130738440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 130738441 . C . PASS END=130738444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 130738445 . T . PASS END=130738453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 130831817 . C . PASS END=130831825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr2 130831826 . T . PASS END=130831826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:16,0 chr2 130831827 . T . PASS END=130831861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 130831862 . C . PASS END=130831862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 130831863 . T . PASS END=130831880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,584:0,51,255:17,0 chr2 130831881 . A . PASS END=130831881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 130831882 . T . PASS END=130831910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:18,0 chr2 130831911 . A . PASS END=130831913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 130831914 . G . PASS END=130831914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:15,0 chr2 130831915 . A . PASS END=130831919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 130831920 . C . PASS END=130831929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:13,0 chr2 130831930 . C . PASS END=130831930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:8,0 chr2 130831931 . G . PASS END=130831936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 130831937 . C . PASS END=130831945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 130831946 . G . PASS END=130831946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 130831947 . G T, 0.01 DRAGENSnpHardQUAL DP=11;MQ=12.57;MQRankSum=1.107;ReadPosRankSum=-1.107;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:10,1,0:0.091,0.000:11:4,0,0:6,1,0:29:6,0,23,36,329,365:6,0,255:7,0:5.9402e-03,2.8655e+01,5.4655e+01,6.4414e+01,3.9227e+02,3.9626e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,9,1,0:5,5,0,1 chr2 130831948 . G . PASS END=130831953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 130831954 . C . PASS END=130831959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr2 130831960 . T . PASS END=130831983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,311:0,24,255:9,0 chr2 130831984 . C . PASS END=130831984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 130831985 . C . PASS END=130831985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 130831986 . A . PASS END=130832000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr2 130832001 . T . PASS END=130832001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 130832002 . T . PASS END=130832004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 130832005 . G . PASS END=130832005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 130832006 . C . PASS END=130832006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 130832007 . A . PASS END=130832009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 130832010 . C . PASS END=130832014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 130832015 . G . PASS END=130832024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 130832025 . G . PASS END=130832041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:6:0,18,210:0,18,210:6,0 chr2 130832042 . G A, 24.19 PASS DP=6;MQ=13.90;MQRankSum=1.537;ReadPosRankSum=1.537;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,3,0:0.500,0.000:6:2,2,0:1,1,0:14:59,0,11,107,107,215:98,0,98:3,0:2.4186e+01,1.8614e-01,1.4186e+01,1.0749e+02,1.4228e+02,2.1781e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,2,1,2:2,1,2,1 chr2 130832043 . C . PASS END=130832044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 130832045 . A . PASS END=130832052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 130832053 . C . PASS END=130832054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 130832055 . G . PASS END=130832055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 130832056 . T . PASS END=130832056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 130832057 . G . PASS END=130832058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 130832059 . T . PASS END=130832059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:6,0 chr2 130832060 . G . PASS END=130832064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr2 130832065 . A . PASS END=130832073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,233:6,0 chr2 130832074 . T . PASS END=130832074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:4,0 chr2 130832075 . G . PASS END=130832085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:5,0 chr2 130832086 . C . PASS END=130832104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,178:0,15,178:6,0 chr2 130832105 . G . PASS END=130832125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 130832126 . G . PASS END=130832126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 130832127 . C T, 22.55 PASS DP=6;MQ=18.30;MQRankSum=0.720;ReadPosRankSum=1.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,2,0:0.333,0.000:6:2,2,0:2,0,0:22:57,0,29,72,143,214:95,0,134:4,0:2.2551e+01,2.6943e-02,3.2027e+01,7.1570e+01,1.7773e+02,2.1751e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,0,2,0:2,2,2,0 chr2 130832128 . C . PASS END=130832128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 130832129 . A . PASS END=130832129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 130832130 . C . PASS END=130832157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 130832158 . G . PASS END=130832159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 130832160 . A . PASS END=130832163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 130832164 . G . LowGQ END=130832164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,296:1,0,255:7,0 chr2 130832165 . C . PASS END=130832165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:8,0 chr2 130832166 . G . PASS END=130832166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 130832167 . C . PASS END=130832167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 130832168 . C . PASS END=130832173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr2 130832174 . G . PASS END=130832174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 130832175 . C . PASS END=130832178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 130832179 . G . PASS END=130832179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr2 130832180 . G . PASS END=130832184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr2 130832185 . G A, 28.03 PASS DP=11;MQ=21.08;MQRankSum=-0.382;ReadPosRankSum=0.566;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:3,8,0:0.727,0.000:11:2,1,0:1,7,0:21:63,0,19,278,107,385:255,0,119:3,0:2.8035e+01,3.4949e-02,2.1909e+01,2.7807e+02,1.4203e+02,3.8830e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,0,5,3:2,1,2,6 chr2 130832186 . C . PASS END=130832193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 130832194 . C . PASS END=130832194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 130832195 . G . PASS END=130832215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 130832216 . G . PASS END=130832220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 130832221 . G . PASS END=130832221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr2 130832222 . C . PASS END=130832222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 130832223 . T . PASS END=130832233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:21,0 chr2 130832234 . C . PASS END=130832235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 130832236 . C . PASS END=130832236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 130832237 . T . PASS END=130832239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 130832240 . G . PASS END=130832240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 130832241 . G . PASS END=130832255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 130832256 . A G, 8.00 DRAGENSnpHardQUAL DP=24;MQ=23.56;MQRankSum=-0.179;ReadPosRankSum=1.550;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,9,0:0.375,0.000:24:5,6,0:10,3,0:8:42,0,31,314,536,850:255,0,255:13,0:7.9976e+00,7.5173e-01,3.4418e+01,3.1468e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,9,0:10,5,6,3 chr2 130832257 . C . PASS END=130832277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,754:0,66,255:24,0 chr2 130832278 . A . PASS END=130832278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 130832279 . G . PASS END=130832288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,992:0,75,255:26,0 chr2 130832289 . A . PASS END=130832291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 130832292 . T A, 28.16 PASS DP=32;MQ=24.78;MQRankSum=-1.496;ReadPosRankSum=2.609;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,13,0:0.406,0.000:32:9,4,0:10,9,0:28:63,0,34,436,643,1079:255,0,255:19,0:2.8158e+01,7.4442e-03,3.7341e+01,4.3623e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,5,5,8:10,9,6,7 chr2 130832293 . A . PASS END=130832328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1126:0,83,255:33,0 chr2 130832329 . G . PASS END=130832329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr2 130832330 . C . PASS END=130832357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1194:0,83,255:34,0 chr2 130832358 . T C, 0.47 DRAGENSnpHardQUAL DP=33;MQ=30.15;MQRankSum=-1.381;ReadPosRankSum=2.285;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:28,5,0:0.152,0.000:33:12,2,0:16,3,0:10:25,0,43,179,1001,1180:95,0,255:28,0:4.7382e-01,9.8565e+00,5.5857e+01,1.8869e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,8,4,1:14,14,3,2 chr2 130832359 . G . PASS END=130832395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1150:0,85,255:34,0 chr2 130832396 . C . PASS END=130832416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1121:0,85,255:34,0 chr2 130832417 . C . PASS END=130832417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:25,0 chr2 130832418 . A . PASS END=130832422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 130832423 . G . PASS END=130832426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 130832427 . T . PASS END=130832443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,908:0,72,255:25,0 chr2 130832444 . C . LowGQ END=130832444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:0:25:0,0,784:2,0,255:21,0 chr2 130832445 . T . PASS END=130832446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 130832447 . A . PASS END=130832448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 130832449 . A . PASS END=130832454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 130832455 . G . PASS END=130832455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 130832456 . C . PASS END=130832463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:24:0,69,1035:0,72,255:26,0 chr2 130832464 . G . PASS END=130832474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1111:0,87,255:30,0 chr2 130832475 . T . PASS END=130832475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 130832476 . C . PASS END=130832478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 130832479 . C . PASS END=130832479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr2 130832480 . A . PASS END=130832480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 130832481 . G . PASS END=130832486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 130832487 . A . PASS END=130832487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:27,0 chr2 130832488 . T . PASS END=130832493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 130832494 . T . PASS END=130832530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1202:0,83,255:39,0 chr2 130832531 . A G, 43.14 PASS DP=42;MQ=66.30;MQRankSum=-2.682;ReadPosRankSum=3.287;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:13,13,0:9,7,0:42:78,0,46,679,779,1457:255,0,255:20,0:4.3137e+01,2.6819e-04,4.8800e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,9,11:7,15,8,12 chr2 130832532 . G . PASS END=130832568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:42:0,87,1490:0,87,255:40,0 chr2 130832569 . T . PASS END=130832835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,112,1656:0,112,255:40,0 chr2 130832836 . G . PASS END=130832872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,109,1800:0,109,255:40,0 chr2 130832873 . G . LowGQ END=130832873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:0:49:0,0,1474:46,0,255:40,0 chr2 130832874 . T . PASS END=130832910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:46:0,120,1800:0,138,255:40,0 chr2 130832911 . T . PASS END=130833121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:38:0,101,1405:0,101,255:40,0 chr2 130833122 . T . PASS END=130833145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1068:0,80,255:35,0 chr2 130834654 . C . PASS END=130834670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 130834671 . C . PASS END=130834677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,141:0,15,141:5,0 chr2 130834678 . T . LowGQ END=130834678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 130834679 . T . PASS END=130834694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,164:5,0 chr2 130834695 . C . PASS END=130834718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:2:0,6,55:0,6,55:3,0 chr2 130834719 . A . PASS END=130834774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr2 130843387 . C . PASS END=130843424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,388:0,33,255:13,0 chr2 130843425 . G . PASS END=130843431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:18,0 chr2 130843432 . G . PASS END=130843432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 130843433 . G . PASS END=130843434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 130843435 . G . PASS END=130843494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,747:0,62,255:26,0 chr2 130843495 . G . PASS END=130843502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 130843503 . T . PASS END=130843513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 130843514 . C . PASS END=130843520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 130843521 . A . PASS END=130843521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 130843522 . G . PASS END=130843522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 130843523 . T . PASS END=130843532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:22,0 chr2 130843533 . C . PASS END=130843536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,790:0,50,255:19,0 chr2 130843537 . T . PASS END=130843550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:20,0 chr2 130843551 . A . PASS END=130843568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,621:0,40,255:18,0 chr2 130843916 . C . PASS END=130843960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:64:0,120,1800:0,126,255:40,0 chr2 130845640 . C . LowDepth;LowGQ END=130845710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 130851011 . C . PASS END=130851025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,311:0,27,255:9,0 chr2 130851026 . C . PASS END=130851026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 130851027 . A . PASS END=130851028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 130851029 . A . PASS END=130851029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 130851030 . A . PASS END=130851030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 130851031 . G . PASS END=130851031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 130851032 . A . PASS END=130851040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 130851041 . G . PASS END=130851061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 130851062 . C . PASS END=130851081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 130857043 . C . LowDepth;LowGQ END=130857209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 130858249 . C . PASS END=130858249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1217:0,96,255:32,0 chr2 130858250 . T . PASS END=130858250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:31,0 chr2 130858251 . C . PASS END=130858253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:37,0 chr2 130858254 . T . PASS END=130858254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:35,0 chr2 130858255 . A . PASS END=130858293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:38:0,84,1260:0,84,255:39,0 chr2 130859683 . C . PASS END=130859753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1202:0,86,255:40,0 chr2 130865582 . C . PASS END=130865652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,103,1704:0,103,255:40,0 chr2 130868116 . A . PASS END=130868128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 130868129 . T . PASS END=130868129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 130868130 . A . PASS END=130868132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 130868133 . A . PASS END=130868143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:17,0 chr2 130868144 . C . PASS END=130868144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 130868145 . T . PASS END=130868150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 130868151 . C . PASS END=130868151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 130868152 . G . PASS END=130868163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr2 130868164 . A . PASS END=130868164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 130868165 . G . PASS END=130868215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,562:0,51,255:19,0 chr2 130868216 . T . PASS END=130868222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 130868223 . T . PASS END=130868231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 130868232 . T . PASS END=130868232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,480:0,1,255:12,0 chr2 130868233 . A . PASS END=130868235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:14:0,32,557:0,32,255:13,0 chr2 130868236 . G . PASS END=130868236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 130868237 . C . PASS END=130868252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 130868253 . T C, 6.38 DRAGENSnpHardQUAL DP=14;MQ=18.60;MQRankSum=1.061;ReadPosRankSum=0.212;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,4,0:0.286,0.000:14:5,2,0:5,2,0:6:40,0,34,135,329,464:113,0,255:9,0:6.3841e+00,1.1355e+00,3.8469e+01,1.3636e+02,3.6483e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,0,4:7,3,2,2 chr2 130869568 . C . PASS END=130869608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:97:38:0,97,1360:0,97,255:40,0 chr2 130869609 . A . LowGQ END=130869609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:0:46:0,0,1266:94,0,255:40,0 chr2 130869610 . A . PASS END=130869674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:33:0,83,1178:0,83,255:40,0 chr2 130872454 . C . PASS END=130872481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 130872482 . T . PASS END=130872514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,219:0,21,219:9,0 chr2 130872515 . T . PASS END=130872531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr2 130872532 . G . PASS END=130872534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 130872535 . C . PASS END=130872535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 130872536 . A . PASS END=130872564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,515:0,45,255:19,0 chr2 130872565 . A . PASS END=130872572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 130872573 . C . PASS END=130872574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 130872575 . G . PASS END=130872591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 130872592 . C . PASS END=130872592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,1 chr2 130872593 . A . PASS END=130872593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:37:24:0,37,841:0,37,255:22,1 chr2 130872594 . T . PASS END=130872594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 130872595 . T . PASS END=130872610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,801:0,69,255:25,0 chr2 130872611 . T . PASS END=130872611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 130872612 . C . PASS END=130872615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 130872616 . G . PASS END=130872620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1200:0,83,255:30,0 chr2 130872621 . G . PASS END=130872627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:31,0 chr2 130872757 . C . PASS END=130872901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,100,1800:0,100,255:40,0 chr2 130877568 . C . PASS END=130877569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 130877570 . C . PASS END=130877570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 130877571 . T . PASS END=130877573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,466:0,31,255:15,0 chr2 130877574 . T . PASS END=130877578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,570:0,40,255:19,0 chr2 130877579 . G . PASS END=130877581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 130877582 . C . PASS END=130877583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 130877584 . G . PASS END=130877584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:18,0 chr2 130877585 . C . PASS END=130877585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 130877586 . T . PASS END=130877586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 130877587 . T . PASS END=130877587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr2 130877588 . G . PASS END=130877588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 130877589 . T . PASS END=130877590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 130877591 . C . PASS END=130877591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 130877592 . A . PASS END=130877593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 130877594 . G . PASS END=130877594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 130877595 . T . PASS END=130877597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 130877598 . G . PASS END=130877599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:45:26:0,45,870:0,45,255:22,0 chr2 130877600 . G . PASS END=130877607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 130877608 . G . PASS END=130877610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 130877611 . T . PASS END=130877611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 130877612 . G . PASS END=130877613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 130877614 . C . PASS END=130877615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 130877616 . A . PASS END=130877619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 130877620 . G . PASS END=130877620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 130877621 . A . PASS END=130877621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:25,0 chr2 130877622 . T . PASS END=130877622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 130877623 . C . PASS END=130877623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 130877624 . C . PASS END=130877624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 130877625 . T . PASS END=130877625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:27,0 chr2 130877626 . T . PASS END=130877628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 130877629 . T . PASS END=130877629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 130877630 . G . PASS END=130877631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130877632 . G . PASS END=130877632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 130877633 . G . PASS END=130877635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 130877636 . T . PASS END=130877636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 130877637 . T . PASS END=130877655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1157:0,90,255:35,0 chr2 130877656 . T . PASS END=130877656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr2 130877657 . G . PASS END=130877663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1665:0,117,255:37,0 chr2 130877664 . T . PASS END=130877664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr2 130877665 . T . PASS END=130877714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,103,1358:0,103,255:40,0 chr2 130877715 . T . PASS END=130877751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,139,255:40,0 chr2 130877752 . T C, 32.81 PASS DP=61;MQ=47.09;MQRankSum=-6.497;ReadPosRankSum=5.169;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,26,0:0.433,0.000:60:15,15,0:19,11,0:33:68,0,43,914,1208,2122:255,0,255:32,0:3.2811e+01,2.3739e-03,4.6377e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,18,12,14:15,19,11,15 chr2 130877753 . G . PASS END=130877789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:63:0,120,1800:0,140,255:40,0 chr2 130877790 . T . PASS END=130878080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:84:34:0,84,1260:0,86,255:40,0 chr2 130878081 . A . PASS END=130878088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,87,255:26,0 chr2 130897128 . T . PASS END=130897129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 130897130 . A . PASS END=130897130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:30,0 chr2 130897131 . A . PASS END=130897196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:32:0,93,1263:0,96,255:40,0 chr2 130897197 . G . PASS END=130897233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:38:0,93,1395:0,98,255:40,0 chr2 130897234 . C T, 49.30 PASS DP=38;MQ=144.10;MQRankSum=0.467;ReadPosRankSum=2.598;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:7,6,0:12,13,0:47:84,0,49,651,674,1325:255,0,255:14,0:4.9300e+01,7.7400e-05,5.2150e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,9,10:13,6,12,7 chr2 130897235 . G . PASS END=130897260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1041:0,84,255:31,0 chr2 130897261 . A . PASS END=130897261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 130897262 . G . PASS END=130897263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130897464 . C . PASS END=130897464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 130897465 . A . PASS END=130897466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 130897467 . T . PASS END=130897467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 130897468 . T . PASS END=130897470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 130897471 . T . PASS END=130897471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:23,0 chr2 130897472 . G . PASS END=130897474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 130897475 . G . PASS END=130897475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:23,0 chr2 130897476 . A . PASS END=130897478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 130897479 . C . PASS END=130897479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 130897480 . T . PASS END=130897488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 130897489 . A . PASS END=130897489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 130897490 . G . PASS END=130897494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,833:0,69,255:24,0 chr2 130897495 . T . PASS END=130897495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 130897496 . G . PASS END=130897520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,823:0,69,255:24,0 chr2 130897596 . C . PASS END=130897601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 130897602 . A . PASS END=130897619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:18,0 chr2 130897620 . A G, 33.85 PASS DP=18;MQ=57.87;MQRankSum=-2.799;ReadPosRankSum=1.288;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,8,0:0.444,0.000:18:4,6,0:6,2,0:34:69,0,45,286,358,644:255,0,255:9,0:3.3851e+01,1.8624e-03,4.7752e+01,2.8605e+02,3.9245e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,7,6,2:7,3,6,2 chr2 130897621 . C . PASS END=130897653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:17,0 chr2 130897654 . A . PASS END=130897655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 130897656 . T . PASS END=130897657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr2 130897658 . G . PASS END=130897669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,629:0,54,255:18,0 chr2 130897752 . C . PASS END=130897767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr2 130897768 . A . PASS END=130897768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 130897769 . G . PASS END=130897791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,795:0,69,255:26,0 chr2 130897792 . A . PASS END=130897793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr2 130897794 . G . PASS END=130897836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,730:0,61,255:26,0 chr2 130897837 . A . PASS END=130897838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 130897839 . G . PASS END=130897845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 130897846 . A . PASS END=130897846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:22,0 chr2 130897847 . T . PASS END=130897847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 130897848 . C . PASS END=130897849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:24,0 chr2 130897850 . T . PASS END=130897875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,976:0,65,255:26,0 chr2 130897876 . T . PASS END=130897880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 130897881 . G . PASS END=130897911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,71,255:27,0 chr2 130897912 . G . PASS END=130897912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 130897913 . C . PASS END=130897922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 130897923 . A . PASS END=130897944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,653:0,46,255:19,0 chr2 130898727 . T . PASS END=130898881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:65:0,120,1800:0,127,255:40,0 chr2 130898927 . T . PASS END=130898952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:42:0,96,1440:0,110,255:40,0 chr2 130899706 . C . PASS END=130899706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 130899707 . T . PASS END=130899707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 130899708 . G . PASS END=130899709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 130899710 . A . PASS END=130899710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 130899711 . T . PASS END=130899715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 130899716 . G . PASS END=130899717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,535:0,34,255:16,0 chr2 130899718 . T . PASS END=130899742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,690:0,51,255:19,0 chr2 130899743 . C . PASS END=130899754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,660:0,44,255:19,0 chr2 130899755 . G . PASS END=130899756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 130899757 . C . PASS END=130899763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 130899764 . A . PASS END=130899764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 130899765 . G . PASS END=130899768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 130899769 . G . PASS END=130899769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 130899770 . C . PASS END=130899773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 130899774 . G . PASS END=130899778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 130899779 . G C, 0.05 DRAGENSnpHardQUAL DP=22;MQ=43.21;MQRankSum=-1.913;ReadPosRankSum=2.679;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:19,3,0:0.136,0.000:22:9,2,0:10,1,0:19:15,0,42,107,643,750:50,0,255:18,0:5.0958e-02,1.9331e+01,6.3831e+01,1.2659e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,3,0:8,11,2,1 chr2 130899780 . G . PASS END=130899785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 130899786 . C . PASS END=130899788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 130899789 . C . PASS END=130899796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 130899797 . A . PASS END=130899797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,529:0,27,255:16,0 chr2 130899798 . C . PASS END=130899803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr2 130899804 . T C, 27.20 PASS DP=20;MQ=41.07;MQRankSum=-2.433;ReadPosRankSum=-0.041;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,6,0:0.300,0.000:20:6,4,0:8,2,0:27:62,0,42,215,501,715:172,0,255:13,0:2.7195e+01,8.4463e-03,4.4508e+01,2.1460e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,5,4,2:7,7,2,4 chr2 130899805 . G . PASS END=130899821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr2 130899822 . T . PASS END=130899822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 130899823 . G . PASS END=130899841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr2 130899842 . C . PASS END=130899851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr2 130899852 . G . PASS END=130899852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 130899853 . C . PASS END=130899880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr2 130899881 . C . PASS END=130899888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:22,0 chr2 130899889 . T . PASS END=130899889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 130899890 . G . PASS END=130899906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 130899907 . C . PASS END=130899907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 130899908 . G . PASS END=130899925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr2 130899926 . C . PASS END=130899926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 130899927 . C . PASS END=130899928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 130899929 . G . PASS END=130899933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 130899934 . G . PASS END=130899963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr2 130899964 . A . PASS END=130899964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr2 130899965 . G . PASS END=130900065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1180:0,83,255:40,0 chr2 130900066 . T . PASS END=130900066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:30,0 chr2 130900067 . T . PASS END=130900067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr2 130900068 . G . PASS END=130900071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 130900072 . C . PASS END=130900072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 130900073 . A . PASS END=130900089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1279:0,89,255:33,0 chr2 130900090 . G . PASS END=130900090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:28,0 chr2 130900091 . C . PASS END=130900102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:30,0 chr2 130900103 . G . PASS END=130900103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 130900104 . C . PASS END=130900108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1094:0,87,255:29,0 chr2 130900109 . G . PASS END=130900112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 130900113 . C . PASS END=130900115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 130900116 . G . PASS END=130900134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,74,255:26,0 chr2 130900135 . C . PASS END=130900137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 130900138 . C . PASS END=130900141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr2 130900142 . C . PASS END=130900143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130900144 . C . PASS END=130900144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 130900145 . C . PASS END=130900149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr2 130900150 . C . PASS END=130900150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 130900151 . T . PASS END=130900152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 130900153 . T . PASS END=130900153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 130900154 . C . PASS END=130900182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:31,0 chr2 130900183 . C . PASS END=130900183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 130900184 . A . PASS END=130900187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 130900188 . A G, 45.80 PASS DP=32;MQ=89.11;MQRankSum=-2.016;ReadPosRankSum=3.298;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:9,9,0:7,7,0:45:81,0,48,564,572,1136:255,0,255:14,0:4.5800e+01,1.4988e-04,5.0850e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,11,5:8,8,8,8 chr2 130900189 . C . PASS END=130900207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 130900208 . C . PASS END=130900208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 130900209 . C . PASS END=130900213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 130900214 . A . PASS END=130900214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr2 130900215 . C . PASS END=130900225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr2 130900226 . T . PASS END=130900236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1225:0,86,255:32,0 chr2 130900237 . T . PASS END=130900237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr2 130900238 . C . PASS END=130900247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1263:0,86,255:33,0 chr2 130900248 . C . PASS END=130900248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:31,0 chr2 130900249 . C . PASS END=130900257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:32,0 chr2 130900258 . A . PASS END=130900258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1076:0,66,255:29,0 chr2 130900259 . C . PASS END=130900263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:30,0 chr2 130900264 . A . PASS END=130900264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 130900265 . G . PASS END=130900272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1096:0,90,255:30,0 chr2 130900273 . G . PASS END=130900277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 130900278 . C . PASS END=130900279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 130900280 . C . PASS END=130900281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 130900282 . A . PASS END=130900325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1199:0,81,255:36,0 chr2 130900326 . A . PASS END=130900326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1296:0,59,255:35,0 chr2 130900327 . G . PASS END=130900561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:94:36:0,94,1390:0,94,255:40,0 chr2 130900562 . T . PASS END=130900562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1132:0,77,255:32,0 chr2 130900563 . C . PASS END=130900571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:30,0 chr2 130900572 . G . PASS END=130900572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:29,0 chr2 130900573 . G . PASS END=130900573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 130900574 . A . PASS END=130900575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 130900576 . G . PASS END=130900593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,92,255:36,0 chr2 130900594 . C . PASS END=130900594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr2 130900595 . T . PASS END=130900605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:33,0 chr2 130900606 . C . PASS END=130900606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 130900607 . C . PASS END=130900608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:28,0 chr2 130900609 . C . PASS END=130900646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 130900647 . G . PASS END=130900647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 130900648 . C . PASS END=130900648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 130900649 . A . PASS END=130900649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 130900650 . C . PASS END=130900652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr2 130900653 . G . PASS END=130900653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 130900654 . C . PASS END=130900655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 130900656 . G . PASS END=130900656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 130900657 . T . PASS END=130900660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 130900661 . T . PASS END=130900661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 130900662 . G . PASS END=130900662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 130900663 . G . PASS END=130900663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 130900664 . C . PASS END=130900680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,861:0,66,255:23,0 chr2 130900681 . G . PASS END=130900681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 130900682 . C . PASS END=130900705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 130900706 . G . PASS END=130900886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:29:0,80,1086:0,80,255:40,0 chr2 130902016 . C . PASS END=130902016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130902017 . T . PASS END=130902017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 130902018 . A . PASS END=130902021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 130902022 . A . PASS END=130902023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:70:29:0,70,962:0,70,255:29,0 chr2 130902024 . T . PASS END=130902026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1005:0,90,255:30,0 chr2 130902027 . T . PASS END=130902027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr2 130902028 . T . PASS END=130902029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:30,0 chr2 130902030 . A . PASS END=130902030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 130902031 . C . PASS END=130902032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1019:0,60,255:29,0 chr2 130902033 . G . PASS END=130902047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1166:0,85,255:32,0 chr2 130902194 . C T, 43.38 PASS DP=10;MQ=48.53;MQRankSum=-0.365;ReadPosRankSum=1.866;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:4,6,0:0.600,0.000:10:2,2,0:2,4,0:40:78,0,40,207,135,342:195,0,117:3,0:4.3375e+01,4.0513e-04,4.3250e+01,2.0657e+02,1.6985e+02,3.4465e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,3,3,3:3,1,3,3 chr2 130902195 . G . PASS END=130902196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 130902197 . C . PASS END=130902201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 130902202 . G . PASS END=130902202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 130902203 . T . PASS END=130902212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,429:0,36,255:13,0 chr2 130902213 . G . PASS END=130902216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 130902217 . A . PASS END=130902217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 130902218 . G . PASS END=130902227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,553:0,48,255:16,0 chr2 130902228 . G . PASS END=130902228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 130902229 . G . PASS END=130902231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 130902232 . T . PASS END=130902258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,545:0,45,255:18,0 chr2 130902259 . A . PASS END=130902259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 130902260 . G . PASS END=130902260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 130902261 . C . PASS END=130902261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:15,0 chr2 130902262 . G . PASS END=130902263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 130902264 . C . PASS END=130902264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 130902265 . A . PASS END=130902265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,587:0,21,255:16,0 chr2 130902266 . G . PASS END=130902268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:18,0 chr2 130902269 . T . PASS END=130902270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 130902271 . G . PASS END=130902271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 130902272 . A . PASS END=130902272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 130902273 . G . PASS END=130902273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 130902274 . T . PASS END=130902274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 130902275 . G . PASS END=130902281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,577:0,54,255:19,0 chr2 130902282 . G . PASS END=130902282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr2 130902283 . G . PASS END=130902312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,668:0,41,255:19,0 chr2 130902313 . G . PASS END=130902324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,853:0,63,255:23,0 chr2 130902325 . T . PASS END=130902325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:21,0 chr2 130902326 . T . PASS END=130902328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr2 130902329 . C . PASS END=130902329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 130902330 . C . PASS END=130902338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:23,0 chr2 130902339 . A . PASS END=130902340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 130902341 . G . PASS END=130902349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:26,0 chr2 130902350 . C . PASS END=130902350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130902351 . C . PASS END=130902351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 130902352 . T . PASS END=130902352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130902353 . C . PASS END=130902366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1030:0,68,255:25,0 chr2 130902367 . A . PASS END=130902367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:23,0 chr2 130902368 . G . PASS END=130902372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,976:0,78,255:26,0 chr2 130902373 . T . PASS END=130902388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:30,0 chr2 130902389 . G . PASS END=130902389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 130902390 . C . PASS END=130902394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:31,0 chr2 130902395 . A . PASS END=130902395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1114:0,52,255:28,0 chr2 130902396 . C . PASS END=130902406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:33:0,88,1217:0,88,255:31,0 chr2 130902407 . T . PASS END=130902407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:29,0 chr2 130902408 . C . PASS END=130902409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1163:0,80,255:29,0 chr2 130902410 . C . PASS END=130902410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 130902411 . C . PASS END=130902414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 130902415 . T . PASS END=130902415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 130902416 . C . PASS END=130902424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1094:0,90,255:30,0 chr2 130902425 . G . PASS END=130902425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 130902426 . T . PASS END=130902426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 130902427 . T . PASS END=130902427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr2 130902428 . T . PASS END=130902429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr2 130902430 . T . PASS END=130902430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr2 130902431 . G . PASS END=130902434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1117:0,90,255:30,0 chr2 130902435 . G . PASS END=130902435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 130902436 . T . PASS END=130902444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 130902445 . C . PASS END=130902445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:28,0 chr2 130902446 . T . PASS END=130902458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 130902459 . C . PASS END=130902478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:25,0 chr2 130902479 . C . PASS END=130902479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr2 130902480 . G . PASS END=130902482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr2 130902483 . C . PASS END=130902483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:16,0 chr2 130902484 . A . PASS END=130902498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 130902499 . C . LowGQ END=130902499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,400:15,0,255:10,0 chr2 130902500 . G . PASS END=130902500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 130902501 . C . PASS END=130902501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:13,0 chr2 130902502 . C . PASS END=130902502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 130902503 . G . PASS END=130902503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:13,0 chr2 130902504 . G . PASS END=130902505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 130902506 . G . PASS END=130902506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 130902507 . C . PASS END=130902507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 130902508 . C . PASS END=130902508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 130902509 . G . LowGQ END=130902509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,282:5,0,255:10,0 chr2 130902510 . A . PASS END=130902510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:12,0 chr2 130902511 . G . PASS END=130902512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:11:14:0,11,405:0,11,255:12,0 chr2 130902513 . G . PASS END=130902514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,335:0,3,255:12,1 chr2 130902515 . C . PASS END=130902516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 130902517 . G . LowGQ END=130902517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,204:75,0,255:9,0 chr2 130902518 . G . PASS END=130902518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,398:0,25,255:12,0 chr2 130902519 . G . PASS END=130902522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 130902523 . G . PASS END=130902523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:11,0 chr2 130902524 . G . PASS END=130902533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 130902534 . G . PASS END=130902535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:26:14:0,26,405:0,26,255:9,0 chr2 130902536 . G . PASS END=130902536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:9,0 chr2 130902537 . C . PASS END=130902537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,474:0,14,255:9,0 chr2 130902538 . C . PASS END=130902544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,25,255:9,0 chr2 130902545 . C . PASS END=130902546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 130902547 . G . PASS END=130902547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,332:0,3,255:8,0 chr2 130902548 . C . PASS END=130902548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 130902549 . C T, 34.09 PASS DP=9;MQ=33.99;MQRankSum=0.361;ReadPosRankSum=1.652;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,4,0:0.444,0.000:9:5,3,0:0,1,0:33:69,0,36,135,160,295:166,0,181:5,0:3.4094e+01,2.1993e-03,3.9329e+01,1.3504e+02,1.9449e+02,2.9776e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,1,3:0,5,2,2 chr2 130902550 . G . PASS END=130902550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr2 130902551 . C . PASS END=130902552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 130902553 . A . LowGQ END=130902553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,319:6,0,255:6,0 chr2 130902554 . C . PASS END=130902554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 130902555 . C . LowGQ END=130902555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,311:6,0,255:6,0 chr2 130902556 . C . PASS END=130902556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 130902557 . C . PASS END=130902557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:7,0 chr2 130902558 . C . PASS END=130902558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 130902559 . G . PASS END=130902559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:5,0 chr2 130902560 . C . PASS END=130902564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:17:7:0,17,270:0,17,227:6,0 chr2 130902565 . C . PASS END=130902565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 130902566 . T . PASS END=130902568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,189:6,0 chr2 130902569 . T . LowGQ END=130902569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,141:18,0,159:5,0 chr2 130910128 . T . PASS END=130910129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 130910130 . A . PASS END=130910130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 130910131 . G . PASS END=130910136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,402:0,33,255:12,0 chr2 130910137 . G . PASS END=130910137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 130910138 . T . PASS END=130910144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr2 130910145 . T . PASS END=130910146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 130910147 . C . PASS END=130910147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 130910148 . C . PASS END=130910156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 130910157 . T . PASS END=130910157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr2 130910158 . C . PASS END=130910168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:18,0 chr2 130910169 . T . PASS END=130910171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 130910172 . C . PASS END=130910175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 130910176 . G . PASS END=130910185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,864:0,66,255:24,0 chr2 130910186 . A . PASS END=130910192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:29,0 chr2 130910193 . C . PASS END=130910193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 130910194 . C . PASS END=130910200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 130910201 . A . PASS END=130910201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 130910202 . G . PASS END=130910206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr2 130910207 . A . PASS END=130910209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 130910210 . G . PASS END=130910212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1247:0,86,255:30,0 chr2 130910213 . C . PASS END=130910213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:29,0 chr2 130910214 . A . PASS END=130910217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:31,0 chr2 130910218 . G . PASS END=130910219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:33:0,67,1164:0,67,255:31,0 chr2 130910220 . G . PASS END=130910225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1294:0,89,255:32,0 chr2 130910226 . C . PASS END=130910226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:31,0 chr2 130910227 . G . PASS END=130910290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1197:0,86,255:37,0 chr2 130910291 . A . PASS END=130910291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:29,0 chr2 130910292 . G . PASS END=130910305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1210:0,86,255:31,0 chr2 130910306 . A . PASS END=130910306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr2 130910307 . G . PASS END=130910341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1064:0,87,255:31,0 chr2 130910342 . C . PASS END=130910342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 130910343 . G . PASS END=130910346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 130910347 . C . PASS END=130910355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1092:0,63,255:28,0 chr2 130910356 . C . PASS END=130910356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 130910357 . A . PASS END=130910360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 130910361 . G . PASS END=130910369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 130910370 . T . PASS END=130910370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 130910371 . G . PASS END=130910372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 130910373 . C . PASS END=130910375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 130910376 . G . PASS END=130910404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1131:0,80,255:34,0 chr2 130910405 . A . PASS END=130910405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr2 130910406 . A . PASS END=130910457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1054:0,85,255:35,0 chr2 130910616 . T . PASS END=130910617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 130910618 . T . PASS END=130910618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 130910619 . G . PASS END=130910702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:31:0,83,1166:0,83,255:40,0 chr2 130910703 . C . PASS END=130910703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr2 130910704 . C . PASS END=130910714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1350:0,99,255:31,0 chr2 130910715 . A . PASS END=130910715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 130910716 . A . PASS END=130910722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 130910723 . A . PASS END=130910723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,934:0,60,255:25,0 chr2 130910724 . C . PASS END=130910729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 130910730 . C . PASS END=130910731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 130910732 . G . PASS END=130910732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 130910733 . C . PASS END=130910744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 130910892 . C . PASS END=130910893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 130910894 . G . PASS END=130910894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 130910895 . G . PASS END=130910895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 130910896 . T . PASS END=130910896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 130910897 . A . PASS END=130910899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 130910900 . G . PASS END=130910900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 130910901 . C . PASS END=130910953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1125:0,80,255:37,0 chr2 130910954 . G . PASS END=130910987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1202:0,86,255:38,0 chr2 130910988 . G . PASS END=130910988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1109:0,69,255:30,0 chr2 130910989 . G . PASS END=130910990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1218:0,86,255:30,0 chr2 130910991 . G A, 49.07 PASS DP=34;MQ=146.65;MQRankSum=-0.416;ReadPosRankSum=4.863;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,15,0:0.455,0.000:33:12,8,0:6,7,0:48:84,0,50,508,636,1143:255,0,255:17,0:4.9073e+01,7.5588e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,11,11,4:11,7,6,9 chr2 130910992 . A . PASS END=130910994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr2 130910995 . G . PASS END=130910998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 130910999 . A . PASS END=130911015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1117:0,90,255:30,0 chr2 130911016 . T . PASS END=130911016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 130911017 . C . PASS END=130911017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 130911018 . G . PASS END=130911021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 130911022 . A . PASS END=130911023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 130911275 . C . PASS END=130911295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,955:0,78,255:26,0 chr2 130911296 . C . PASS END=130911362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:34:0,89,1249:0,89,255:40,0 chr2 130911363 . T . PASS END=130911363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:66:39:0,66,1071:0,66,255:35,0 chr2 130911364 . T . PASS END=130911388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1432:0,87,255:39,0 chr2 130911389 . C . PASS END=130911389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1243:0,77,255:33,0 chr2 130911390 . A . PASS END=130911435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:34:0,80,1213:0,80,255:36,0 chr2 130911436 . T . PASS END=130911436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,104,255:26,0 chr2 130911437 . C . PASS END=130911453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:33:0,81,1215:0,83,255:31,0 chr2 130911454 . A . PASS END=130911465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 130911466 . C . PASS END=130911466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 130911467 . T . PASS END=130911477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:25,0 chr2 130911478 . C . PASS END=130911495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,720:0,54,255:19,0 chr2 130911496 . C . PASS END=130911499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 130911500 . G . PASS END=130911500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 130911501 . C . PASS END=130911508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:15:0,36,540:0,45,255:13,0 chr2 130911850 . C . PASS END=130911853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:18,0 chr2 130911854 . G . PASS END=130911877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,737:0,60,255:25,0 chr2 130911878 . G . PASS END=130911878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 130911879 . G . PASS END=130911879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 130911880 . G . PASS END=130911880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 130911881 . G . PASS END=130911886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr2 130911887 . T . PASS END=130911887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 130911888 . T . PASS END=130911894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 130911895 . C . PASS END=130911895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 130911896 . T . PASS END=130911897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 130911898 . G . PASS END=130911898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 130911899 . C . PASS END=130911904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 130911905 . A . PASS END=130911913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr2 130911914 . A . PASS END=130911916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 130911917 . T . PASS END=130911920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 130911921 . T . PASS END=130911924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 130911925 . C . PASS END=130911925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 130911926 . A . PASS END=130911931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 130911932 . A . PASS END=130911944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,735:0,47,255:19,0 chr2 130911945 . T . PASS END=130911946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 130911947 . A . PASS END=130912018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:17:0,40,576:0,40,255:19,0 chr2 130912019 . G . PASS END=130912019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 130912020 . G . PASS END=130912024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 130912025 . A . PASS END=130912025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,488:0,4,255:14,0 chr2 130912026 . C . PASS END=130912028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:16,0 chr2 130912029 . G . PASS END=130912029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr2 130912030 . C . PASS END=130912044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr2 130912045 . T . PASS END=130912045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 130912046 . A . PASS END=130912048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 130912049 . T . PASS END=130912049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 130912050 . G . PASS END=130912053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 130912054 . A . PASS END=130912055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 130912668 . C . PASS END=130912688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:26,0 chr2 130912689 . A . PASS END=130912695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:30,0 chr2 130912696 . G . PASS END=130912696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 130912697 . C . PASS END=130912708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1133:0,90,255:32,0 chr2 130912709 . T . PASS END=130912709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 130912710 . T . PASS END=130912738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1186:0,96,255:34,0 chr2 130912739 . C . PASS END=130912739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:34,0 chr2 130912740 . T . PASS END=130912745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:36:0,82,1443:0,82,255:36,0 chr2 130912746 . C . PASS END=130912747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:34,0 chr2 130912748 . G . PASS END=130912776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1219:0,88,255:37,0 chr2 130912777 . G . PASS END=130912777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1131:0,58,255:28,0 chr2 130912778 . A . PASS END=130912793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1117:0,80,255:30,0 chr2 130912794 . T . PASS END=130912794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:26,0 chr2 130912795 . T . PASS END=130912802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 130912803 . A . PASS END=130912803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 130912804 . T . PASS END=130912806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 130912807 . G . PASS END=130912832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,773:0,61,255:26,0 chr2 130912841 . C . PASS END=130912841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 130913608 . C . PASS END=130913617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:26,0 chr2 130913618 . A . PASS END=130913646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr2 130913647 . G . PASS END=130913691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,922:0,62,255:26,0 chr2 130913692 . A . PASS END=130913692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,676:0,36,255:20,0 chr2 130913693 . G . PASS END=130913698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,861:0,69,255:23,0 chr2 130913699 . T . PASS END=130913699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 130913700 . C . PASS END=130913708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,864:0,72,255:24,0 chr2 130914158 . A . PASS END=130914160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 130914161 . T . PASS END=130914161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:15,0 chr2 130914162 . C . PASS END=130914167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 130914168 . G . PASS END=130914168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:16,0 chr2 130914169 . A . PASS END=130914171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 130914172 . C . PASS END=130914172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 130914173 . G . PASS END=130914186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr2 130914187 . G . PASS END=130914199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 130914200 . C . PASS END=130914200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 130914201 . T . PASS END=130914224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 130914225 . T . PASS END=130914225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 130914226 . G . PASS END=130914248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,790:0,63,255:24,0 chr2 130914265 . G . PASS END=130914279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,886:0,72,255:25,0 chr2 130914280 . T . PASS END=130914280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 130914281 . G . PASS END=130914291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 130914292 . A . PASS END=130914292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 130914293 . G . PASS END=130914305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr2 130914306 . G . PASS END=130914307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 130914308 . T . PASS END=130914319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:25,0 chr2 130914320 . T . PASS END=130914320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:21,0 chr2 130914321 . C . PASS END=130914338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,963:0,72,255:26,0 chr2 130914339 . C . PASS END=130914351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 130914352 . G . PASS END=130914378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,892:0,69,255:26,0 chr2 130914379 . G . PASS END=130914386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 130914824 . C . PASS END=130914825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 130914826 . T . PASS END=130914834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:8,0 chr2 130914835 . C . PASS END=130914868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 130914869 . G . PASS END=130914873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 130914874 . G . PASS END=130914874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 130914875 . G . PASS END=130914875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr2 130914876 . C . PASS END=130914876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 130914877 . C . PASS END=130914895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,380:0,33,255:12,0 chr2 130914896 . T . PASS END=130914896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr2 130914897 . T . PASS END=130914897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 130914898 . G . PASS END=130914900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 130914901 . A . PASS END=130914901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 130914902 . A . PASS END=130914909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 130914910 . C . PASS END=130914910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 130914911 . A . PASS END=130914938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 130914939 . A . PASS END=130914939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 130914940 . C . PASS END=130914940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 130914941 . A . PASS END=130914941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr2 130914942 . C . PASS END=130914969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr2 130915757 . C . PASS END=130915765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 130915766 . A . PASS END=130915787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,762:0,63,255:26,0 chr2 130915788 . A . PASS END=130915789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,954:0,81,255:27,0 chr2 130915790 . C . PASS END=130915809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:26,0 chr2 130915810 . G . PASS END=130915810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 130915811 . G . PASS END=130915811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 130915812 . G . PASS END=130915812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:21,0 chr2 130915813 . C . PASS END=130915820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 130915821 . C . PASS END=130915821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 130915822 . C . PASS END=130915822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 130915823 . T . PASS END=130915823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:18,0 chr2 130915824 . C . PASS END=130915838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,698:0,46,255:19,0 chr2 130918759 . T . PASS END=130918775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 130918776 . C . PASS END=130918794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 130918795 . G . PASS END=130918795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 130918796 . G . PASS END=130918799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 130918800 . T . PASS END=130918800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 130918801 . G . PASS END=130918823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 130918824 . G . PASS END=130918835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 130918836 . G . PASS END=130918836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 130918837 . A . PASS END=130918845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 130921947 . C . PASS END=130922018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,191,255:40,0 chr2 130925031 . C . PASS END=130925036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:23,0 chr2 130925037 . C . PASS END=130925037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 130925038 . A . PASS END=130925039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:24,0 chr2 130925040 . A . PASS END=130925040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,766:0,17,255:22,0 chr2 130925041 . G . PASS END=130925044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,805:0,72,255:25,0 chr2 130925045 . C . PASS END=130925045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:23,0 chr2 130925046 . T . PASS END=130925049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:26,0 chr2 130925050 . C . PASS END=130925050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 130925051 . T . PASS END=130925055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:30,0 chr2 130925056 . A . PASS END=130925056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 130925057 . T . PASS END=130925063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:30,0 chr2 130925064 . G . PASS END=130925064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 130925065 . G . PASS END=130925087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1133:0,82,255:33,0 chr2 130925088 . C T, 49.70 PASS DP=34;MQ=143.27;MQRankSum=1.929;ReadPosRankSum=2.997;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,17,0:0.500,0.000:34:5,12,0:12,5,0:48:84,0,50,600,608,1208:255,0,255:17,0:4.9700e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,8,9:5,12,9,8 chr2 130925089 . G . PASS END=130925098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:34,0 chr2 130925099 . A . PASS END=130925099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:32,0 chr2 130925100 . G . PASS END=130925125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1234:0,86,255:34,0 chr2 130925126 . G . PASS END=130925134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 130925135 . C . PASS END=130925156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:26,0 chr2 130925157 . T . PASS END=130925159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 130925160 . T . PASS END=130925163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr2 130929922 . C . PASS END=130929942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,658:0,54,255:19,0 chr2 130929943 . G . PASS END=130929994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr2 130929995 . G . PASS END=130930000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 130930001 . A . PASS END=130930002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 130930003 . G . PASS END=130930003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 130930004 . A . PASS END=130930004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:27,0 chr2 130930005 . C . PASS END=130930007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 130930008 . G . PASS END=130930035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,886:0,64,255:26,0 chr2 130930036 . C . PASS END=130930037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 130930038 . G . PASS END=130930058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,847:0,61,255:24,0 chr2 130930059 . G . PASS END=130930061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 130930062 . C . PASS END=130930073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,731:0,60,255:20,0 chr2 130930198 . C . PASS END=130930250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,106,1767:0,106,255:40,0 chr2 130930360 . T . PASS END=130930468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:93:44:0,93,1575:0,93,255:40,0 chr2 130930851 . C . PASS END=130930856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,213,255:40,0 chr2 130930857 . A . PASS END=130930927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:72:0,120,1800:0,174,255:40,0 chr2 130931087 . C . PASS END=130931229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:32:0,90,1324:0,91,255:40,0 chr2 130932487 . C . PASS END=130932573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:38:0,87,1305:0,101,255:40,0 chr2 130934127 . C . PASS END=130934129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 130934130 . T . PASS END=130934130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 130934131 . A . PASS END=130934144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 130934145 . C . PASS END=130934145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 130934146 . T . PASS END=130934182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1103:0,83,255:33,0 chr2 130934183 . A . PASS END=130934183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 130934184 . G . PASS END=130934192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 130934193 . G . PASS END=130934193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,0 chr2 130934194 . G . PASS END=130934197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 130934198 . T . PASS END=130934203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 130934204 . C . PASS END=130934205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 130934206 . A . PASS END=130934206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 130934207 . A . PASS END=130934207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 130934208 . C . PASS END=130934208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 130934209 . C . PASS END=130934210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 130938869 . C . PASS END=130938881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,225:0,21,225:7,0 chr2 130938882 . A . PASS END=130938882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 130938883 . G . PASS END=130938918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:9,0 chr2 130938919 . G . PASS END=130938963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,374:0,30,255:13,0 chr2 130938964 . C . PASS END=130938971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:17,0 chr2 130938972 . C . PASS END=130938972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 130938973 . C . PASS END=130938984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,51,255:18,0 chr2 130938985 . A . PASS END=130938994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 130938995 . C . PASS END=130939009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 130939010 . G . PASS END=130939010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 130939011 . G . PASS END=130939015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 130939016 . G . PASS END=130939090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 130939091 . C . PASS END=130939091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 130939092 . G . PASS END=130939095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 130939096 . C . PASS END=130939096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr2 130939097 . A . PASS END=130939100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 130939101 . A . PASS END=130939115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr2 130939116 . A . PASS END=130939116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 130939117 . G . PASS END=130939124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 130939125 . C . PASS END=130939128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 130939129 . T . PASS END=130939129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:12,0 chr2 130939130 . C . PASS END=130939131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 130939132 . G . PASS END=130939140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 130939141 . G . PASS END=130939141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:13,0 chr2 130939142 . C . PASS END=130939147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 130939148 . T . PASS END=130939177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,437:0,39,255:13,0 chr2 130939178 . G . PASS END=130939187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 130939188 . G . PASS END=130939199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,496:0,39,255:13,0 chr2 130939200 . G . PASS END=130939200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 130939201 . C . PASS END=130939205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 130939206 . G . PASS END=130939206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 130939207 . G . PASS END=130939216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 130939217 . G . PASS END=130939217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 130939218 . C . PASS END=130939227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 130939228 . T . PASS END=130939235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 130939236 . C . PASS END=130939236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:14,0 chr2 130939237 . C . PASS END=130939238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 130939239 . T . PASS END=130939239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 130939240 . T . PASS END=130939240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 130939241 . A . PASS END=130939244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:13,0 chr2 130939245 . C . PASS END=130939246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,563:0,12,255:13,1 chr2 130939247 . A . PASS END=130939247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,545:0,20,255:14,0 chr2 130939248 . A . PASS END=130939250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 130939251 . G . PASS END=130939260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 130939261 . A . PASS END=130939280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 130939281 . G . LowGQ END=130939281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:12,0 chr2 130939282 . G . PASS END=130939287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 130939288 . A G, 50.00 PASS DP=13;MQ=232.70;MQRankSum=0.000;ReadPosRankSum=1.381;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,8,0:0.615,0.000:13:2,6,0:3,2,0:46:85,0,46,185,185,185:255,0,147:5,0:5.0000e+01,1.0070e-04,4.8805e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,2,3,5:2,3,3,5 chr2 130939289 . G . PASS END=130939322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 130939323 . G . PASS END=130939323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 130939324 . T . PASS END=130939324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 130939325 . C . PASS END=130939339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 130939340 . C . PASS END=130939347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 130939348 . G A, 50.00 PASS DP=14;MQ=235.70;MQRankSum=0.667;ReadPosRankSum=1.333;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,9,0:0.643,0.000:14:2,7,0:3,2,0:47:85,0,47,322,179,501:255,0,152:4,0:5.0000e+01,8.2318e-05,5.0484e+01,3.2188e+02,2.1363e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,4,5:3,2,6,3 chr2 130939349 . T . PASS END=130939366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:11,0 chr2 130939367 . C . PASS END=130939377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 130939378 . C . PASS END=130939380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 130939381 . C . PASS END=130939384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 130939385 . G . PASS END=130939385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:6,0 chr2 130939386 . C . LowGQ END=130939386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,257:4,0,255:6,0 chr2 130939387 . A . PASS END=130939387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 130939388 . A . PASS END=130939393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,225:0,11,255:6,0 chr2 130939394 . C . PASS END=130939394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:4,0 chr2 130939395 . C . PASS END=130939399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,180:5,0 chr2 130939400 . G . LowGQ END=130939403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:0,0,118:4,0 chr2 130939856 . A . PASS END=130939856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 130939857 . T . PASS END=130939868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 130939869 . G . PASS END=130939874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 130939875 . G . PASS END=130939946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:17,0 chr2 130939947 . A . PASS END=130939947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 130939948 . G . PASS END=130939970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,582:0,41,255:19,0 chr2 130939971 . A . PASS END=130939971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr2 130939972 . G . PASS END=130939979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,729:0,47,255:19,0 chr2 130939980 . A . PASS END=130939987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:20,0 chr2 130939988 . C . PASS END=130940011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr2 130940012 . C . PASS END=130940012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:16,0 chr2 130940013 . C . PASS END=130940025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:17,0 chr2 130940200 . G . PASS END=130940203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr2 130940204 . C . PASS END=130940204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:11,0 chr2 130940205 . T . PASS END=130940207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 130940208 . T . PASS END=130940208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 130940209 . G . PASS END=130940210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 130940211 . A . PASS END=130940211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 130940212 . C . PASS END=130940218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 130940219 . A . PASS END=130940219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 130940220 . A . PASS END=130940231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 130940232 . C . PASS END=130940232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 130940233 . C . PASS END=130940233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 130940234 . C . PASS END=130940235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:9,0 chr2 130940236 . C . PASS END=130940241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 130940242 . C . PASS END=130940242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 130940243 . G . PASS END=130940249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 130940250 . A . PASS END=130940250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 130940251 . G . PASS END=130940270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:11,0 chr2 130940271 . C . PASS END=130940272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 130940273 . G . PASS END=130940276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 130940277 . A . PASS END=130940297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 130940298 . A . PASS END=130940299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:7,0 chr2 130940300 . G . PASS END=130940300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 130940301 . A . PASS END=130940301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:7,0 chr2 130940302 . C . PASS END=130940307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr2 130940308 . G . PASS END=130940308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 130940309 . G . PASS END=130940314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 130940315 . T . PASS END=130940316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:6,0 chr2 130940317 . T . PASS END=130940322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 130940323 . C . PASS END=130940342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,188:0,18,188:6,0 chr2 130940343 . C . PASS END=130940343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 130940344 . C . LowGQ END=130940344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,204:5,0 chr2 130940345 . C . PASS END=130940345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr2 130940346 . G . PASS END=130940347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,178:0,4,178:4,0 chr2 130940348 . G . PASS END=130940348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 130941360 . A . PASS END=130941539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:30:0,82,1034:0,82,255:40,0 chr2 130946080 . T . PASS END=130946159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,127,255:40,0 chr2 130948042 . G . PASS END=130948043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 130948044 . A . PASS END=130948044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr2 130948045 . G . PASS END=130948056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,792:0,63,255:26,0 chr2 130948057 . G . PASS END=130948242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:27:0,81,1039:0,81,255:40,0 chr2 130948243 . A . PASS END=130948252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:62:30:0,62,1025:0,62,255:26,0 chr2 130948253 . T . PASS END=130948253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:26,0 chr2 130948254 . C . PASS END=130948254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 130948255 . C . PASS END=130948255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr2 130948256 . T . PASS END=130948256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:25,0 chr2 130948257 . T . PASS END=130948258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:28:0,40,939:0,40,255:27,0 chr2 130948259 . A . PASS END=130948259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 130948260 . A . PASS END=130948260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:27,0 chr2 130948261 . T . PASS END=130948261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,898:0,84,255:28,0 chr2 130948262 . T . PASS END=130948262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 130948263 . G . PASS END=130948263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,886:0,37,255:24,0 chr2 130948264 . A . PASS END=130948264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 130949404 . T . PASS END=130949410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,116,1628:0,116,255:40,0 chr2 130949411 . G T, 40.02 PASS DP=48;MQ=79.21;MQRankSum=-2.910;ReadPosRankSum=1.768;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,17,0:0.354,0.000:48:12,6,0:19,11,0:40:75,0,49,608,1072,1680:255,0,255:31,0:4.0016e+01,4.6028e-04,5.2000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,15,14,3:15,16,9,8 chr2 130949412 . C . PASS END=130949490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,109,1653:0,109,255:40,0 chr2 130949491 . G A, 26.78 PASS DP=53;MQ=65.23;MQRankSum=-4.214;ReadPosRankSum=0.475;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,16,0:0.302,0.000:53:18,7,0:19,9,0:27:62,0,48,543,1286,1829:255,0,255:37,0:2.6777e+01,9.1707e-03,5.0559e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,18,7,9:22,15,8,8 chr2 130949492 . C . PASS END=130949552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,100,1598:0,100,255:40,0 chr2 130949553 . A G, 23.62 PASS DP=40;MQ=59.73;MQRankSum=-2.575;ReadPosRankSum=0.576;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,11,0:0.275,0.000:40:16,4,0:13,7,0:24:58,0,46,393,943,1336:255,0,255:28,0:2.3624e+01,1.8950e-02,4.8769e+01,3.9337e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,4,7:17,12,5,6 chr2 130949554 . C . PASS END=130949583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,104,1405:0,104,255:40,0 chr2 130949584 . C . PASS END=130949584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1343:0,76,255:37,0 chr2 130949585 . A . PASS END=130949590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,114,1637:0,119,255:40,0 chr2 130949591 . G . PASS END=130949683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:38:0,93,1395:0,98,255:40,0 chr2 130949684 . T . PASS END=130949684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:30,0 chr2 130949685 . G . PASS END=130949700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1327:0,95,255:34,0 chr2 130951359 . C . PASS END=130951372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,726:0,66,255:24,0 chr2 130951373 . G . PASS END=130951373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 130951374 . G . PASS END=130951385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,856:0,62,255:26,0 chr2 130951386 . A . PASS END=130951386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130951387 . A . PASS END=130951387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 130951388 . A . PASS END=130951388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:22:29:0,22,647:0,22,255:25,0 chr2 130951389 . C . PASS END=130951389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 130951390 . T . PASS END=130951390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr2 130951391 . G . PASS END=130951412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:33:0,83,1156:0,83,255:38,0 chr2 130951413 . G . PASS END=130951413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:36,0 chr2 130951414 . G . PASS END=130951510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:85:40:0,85,1490:0,85,255:40,0 chr2 130951511 . T . PASS END=130951547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,147,255:40,0 chr2 130951548 . G A, 192.53 PASS DP=50;MQ=69.06;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,50,0:1.000,0.000:50:0,28,0:0,22,0:147:230,150,0,1931,150,1931:255,150,0:0,0:1.9253e+02,1.4748e+02,0.0000e+00,4.5000e+02,1.8225e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,25:0,0,29,21:130951548 chr2 130951549 . G . PASS END=130951565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,153,255:40,0 chr2 130951566 . G A, 212.21 PASS DP=57;MQ=66.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,57,0:1.000,0.000:57:0,31,0:0,26,0:167:250,170,0,2091,170,2091:255,171,0:0,0:2.1221e+02,1.6716e+02,0.0000e+00,4.5000e+02,2.0193e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,28:0,0,33,24:130951548 chr2 130951567 . T . PASS END=130951580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,134,255:40,0 chr2 130951581 . A G, 44.75 PASS DP=58;MQ=66.42;MQRankSum=-2.760;ReadPosRankSum=1.118;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:26,32,0:0.552,0.000:58:13,18,0:13,14,0:42:80,0,42,180,180,180:255,0,255:23,0:4.4750e+01,2.9589e-04,4.4609e+01,1.7952e+02,2.1429e+02,1.8253e+02:0.00,34.77,37.78,34.77,69.54,37.78:17,9,21,11:14,12,23,9:130951581 chr2 130951582 . G . PASS END=130951583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 130951584 . T C, 44.75 PASS DP=58;MQ=66.20;MQRankSum=-2.555;ReadPosRankSum=1.210;FractionInformativeReads=0.983;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:26,31,0:0.544,0.000:57:12,17,0:14,14,0:42:80,0,42,180,180,180:255,0,255:24,0:4.4750e+01,2.9589e-04,4.4609e+01,1.7952e+02,2.1429e+02,1.8253e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,8,20,11:14,12,22,9:130951581 chr2 130951585 . G . PASS END=130951625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,141,255:40,0 chr2 130951626 . G . PASS END=130951637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:64:0,120,1800:0,143,255:40,0 chr2 130951638 . G . PASS END=130951638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,4:69:52:69:0,52,2260:0,52,255:40,0 chr2 130951639 . A . PASS END=130951716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:60:0,120,1800:0,142,255:40,0 chr2 130951717 . T . PASS END=130951753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,131,255:40,0 chr2 130951754 . G T, 32.13 PASS DP=59;MQ=46.83;MQRankSum=2.360;ReadPosRankSum=3.820;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,19,0:0.322,0.000:59:19,16,0:21,3,0:32:67,0,41,680,1423,2102:255,0,255:34,0:3.2130e+01,2.8284e-03,4.4128e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,17,6,13:20,20,7,12 chr2 130951755 . T . PASS END=130951791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,114,1710:0,130,255:40,0 chr2 130951792 . G . PASS END=130951810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,100,1676:0,100,255:40,0 chr2 130951811 . A . PASS END=130951847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:42:0,90,1454:0,90,255:40,0 chr2 130951848 . T C, 11.15 PASS DP=40;MQ=43.09;MQRankSum=-3.701;ReadPosRankSum=2.171;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,10,0:0.250,0.000:40:15,8,0:15,2,0:11:46,0,41,329,1073,1402:255,0,255:25,0:1.1155e+01,3.4651e-01,4.4472e+01,3.2922e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,12,3,7:15,15,5,5 chr2 130951849 . A . PASS END=130951885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:41:0,96,1607:0,96,255:40,0 chr2 130951886 . C . PASS END=130951911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,147,255:40,0 chr2 130951912 . T . PASS END=130951948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,143,255:40,0 chr2 130951949 . G A, 21.93 PASS DP=67;MQ=40.97;MQRankSum=-4.166;ReadPosRankSum=3.526;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:48,19,0:0.284,0.000:67:27,9,0:21,10,0:22:57,0,41,664,1630,2294:255,0,255:40,0:2.1928e+01,2.8119e-02,4.4153e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,22,9,10:27,21,9,10 chr2 130951950 . C . PASS END=130951986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,182,255:40,0 chr2 130951987 . C . PASS END=130951987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 130951988 . C . PASS END=130951988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 130951989 . C . PASS END=130951998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,182,255:40,0 chr2 130951999 . T . PASS END=130951999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:64:0,120,1800:0,137,255:40,0 chr2 130952000 . G . PASS END=130952000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 130952001 . G . PASS END=130952037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:44:0,120,1800:0,125,255:40,0 chr2 130952038 . G A, 12.84 PASS DP=44;MQ=51.73;MQRankSum=-3.515;ReadPosRankSum=2.899;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,10,0:0.227,0.000:44:22,4,0:12,6,0:13:47,0,46,358,1158,1516:255,0,255:33,0:1.2836e+01,2.3221e-01,4.8882e+01,3.5793e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,24,3,7:20,14,5,5 chr2 130952039 . C . PASS END=130952039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 130952652 . C . PASS END=130952655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,80,255:26,0 chr2 130952656 . T . PASS END=130952660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 130952661 . G . PASS END=130952661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 130952662 . A . PASS END=130952666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 130952667 . G . PASS END=130952667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:30,0 chr2 130952668 . T . PASS END=130952678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,95,255:34,0 chr2 130952679 . G . PASS END=130952717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:35:0,97,1299:0,97,255:40,0 chr2 130952718 . G A, 38.04 PASS DP=41;MQ=58.91;MQRankSum=-5.267;ReadPosRankSum=2.220;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:23,18,0:0.439,0.000:41:12,8,0:11,10,0:38:73,0,45,644,815,1458:255,0,255:23,0:3.8044e+01,7.4946e-04,4.8051e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,13,8,10:15,8,10,8:130952718 chr2 130952719 . T . PASS END=130952724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,110,1474:0,110,255:40,0 chr2 130952725 . C T, 36.72 PASS DP=43;MQ=61.01;MQRankSum=-5.379;ReadPosRankSum=5.034;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:25,18,0:0.419,0.000:43:14,8,0:11,10,0:36:71,0,45,586,886,1472:255,0,255:24,0:3.6719e+01,9.9258e-04,4.8051e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,8,10:14,11,10,8:130952718 chr2 130952726 . T . PASS END=130952764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:42:0,110,1676:0,110,255:40,0 chr2 130952765 . G . PASS END=130952774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1410:0,101,255:38,0 chr2 130952775 . C . PASS END=130952775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr2 130952776 . C . PASS END=130952800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1418:0,98,255:38,0 chr2 130953722 . C . PASS END=130953722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 130953723 . G . PASS END=130953726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 130953727 . A . PASS END=130953727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 130953728 . C . PASS END=130953734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,845:0,66,255:24,0 chr2 130953735 . C . PASS END=130953735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:24,0 chr2 130953736 . T . PASS END=130953737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 130953738 . C . PASS END=130953738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 130953739 . A . PASS END=130953739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 130953740 . G . PASS END=130953740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 130953741 . G . PASS END=130953753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 130953754 . G . PASS END=130953755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1094:0,87,255:29,0 chr2 130953756 . T . PASS END=130953756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 130953757 . C . PASS END=130953892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:29:0,87,1116:0,87,255:40,0 chr2 130953893 . C . PASS END=130953893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:33,0 chr2 130953894 . A . PASS END=130953908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:35:0,87,1302:0,89,255:34,0 chr2 130953909 . A . PASS END=130953909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 130953910 . C . PASS END=130953914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 130953915 . C . PASS END=130953944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:26,0 chr2 130955931 . C . PASS END=130955933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 130959898 . G . PASS END=130959985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:40:0,87,1276:0,87,255:40,0 chr2 130959986 . T . PASS END=130960012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:43:0,96,1397:0,96,255:40,0 chr2 130961742 . C . PASS END=130961769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,154,255:40,0 chr2 131096693 . T . PASS END=131096703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:31,0 chr2 131096704 . C . PASS END=131096705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 131096706 . G . PASS END=131096805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1150:0,80,255:40,0 chr2 131097184 . C . PASS END=131097197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 131097198 . C . PASS END=131097198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 131097199 . T . PASS END=131097201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 131097202 . T . PASS END=131097202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 131097203 . G . PASS END=131097215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 131097216 . C . PASS END=131097216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 131097217 . A . PASS END=131097217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 131097218 . G . PASS END=131097218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,233:6,0 chr2 131097219 . C . PASS END=131097219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 131097220 . T . PASS END=131097241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:9,0 chr2 131097242 . C . LowGQ END=131097242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr2 131097243 . T . PASS END=131097271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr2 131097272 . G . PASS END=131097304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 131097305 . A . PASS END=131097305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 131097306 . A . PASS END=131097322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,329:0,33,255:11,0 chr2 131097323 . G . PASS END=131097335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:8,0 chr2 131098481 . C . PASS END=131098486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 131098487 . G . PASS END=131098487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,845:0,12,255:23,0 chr2 131098488 . G . PASS END=131098491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,887:0,67,255:26,0 chr2 131098492 . C . PASS END=131098504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,958:0,84,255:28,0 chr2 131098505 . G . PASS END=131098505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 131098506 . A . PASS END=131098508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 131098509 . T . PASS END=131098509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 131098510 . A . PASS END=131098513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 131098514 . T . PASS END=131098514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:28,0 chr2 131098515 . G . PASS END=131098515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 131098516 . T . PASS END=131098516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 131098517 . G . PASS END=131098517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 131098518 . A . PASS END=131098518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 131098519 . G . PASS END=131098522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 131098523 . C . PASS END=131098523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 131098524 . T . PASS END=131098536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1064:0,90,255:30,0 chr2 131098537 . C . PASS END=131098543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1039:0,71,255:25,0 chr2 131098544 . G . PASS END=131098547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:28:0,54,810:0,84,255:19,0 chr2 131098548 . G . PASS END=131098578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr2 131098579 . G . PASS END=131098591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 131098592 . G . PASS END=131098609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:13:0,33,495:0,39,255:13,0 chr2 131098610 . G . PASS END=131098612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr2 131099240 . C . PASS END=131099240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 131099241 . T . PASS END=131099241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 131099242 . G . PASS END=131099242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 131099243 . C . PASS END=131099243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 131099244 . T . PASS END=131099254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 131099255 . C . PASS END=131099281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:25,0 chr2 131099282 . C . PASS END=131099282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 131099283 . T . PASS END=131099322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,861:0,68,255:25,0 chr2 131099414 . C . PASS END=131099414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 131099415 . T . PASS END=131099415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,856:0,29,255:26,0 chr2 131099416 . G . PASS END=131099416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:35:28:0,35,912:0,35,255:25,0 chr2 131099417 . G . PASS END=131099417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 131099418 . C . PASS END=131099418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:27,0 chr2 131099419 . G . PASS END=131099419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 131099420 . T . PASS END=131099420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:10:29:0,10,947:0,10,255:27,0 chr2 131099421 . G . PASS END=131099421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 131099422 . G . PASS END=131099422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131099423 . A . PASS END=131099424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:43:30:0,43,1030:0,43,255:28,0 chr2 131099425 . G . PASS END=131099426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 131099427 . A . PASS END=131099427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 131099428 . G . PASS END=131099428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 131099429 . A . PASS END=131099429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:33,0 chr2 131099430 . C . PASS END=131099430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:33,0 chr2 131099431 . C . PASS END=131099431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:32,0 chr2 131099432 . T . PASS END=131099433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:32,0 chr2 131099434 . G . PASS END=131099436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 131099437 . C . PASS END=131099437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1186:0,28,255:31,0 chr2 131099438 . T . PASS END=131099438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1202:0,58,255:31,0 chr2 131099439 . C . PASS END=131099439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:31,0 chr2 131099440 . C . PASS END=131099440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 131099441 . A . PASS END=131099441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1194:0,58,255:31,0 chr2 131099442 . T . PASS END=131099442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1194:0,28,255:31,0 chr2 131099443 . G . PASS END=131099443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1232:0,58,255:31,0 chr2 131099444 . T . PASS END=131099444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 131099445 . G . PASS END=131099445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1185:0,47,255:31,0 chr2 131099446 . G . PASS END=131099446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:30,0 chr2 131099447 . G . PASS END=131099447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 131099448 . A . PASS END=131099448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:28,0 chr2 131099449 . A . PASS END=131099449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 131099450 . G . PASS END=131099450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:39:36:0,39,1196:0,39,255:31,0 chr2 131099451 . C . PASS END=131099452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1340:0,92,255:32,0 chr2 131099453 . T . PASS END=131099453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1271:0,34,255:30,0 chr2 131099454 . A . PASS END=131099454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,95,255:30,0 chr2 131099455 . C . PASS END=131099455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:30,0 chr2 131099456 . T . PASS END=131099456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:34:37:0,34,1279:0,34,255:30,0 chr2 131099457 . G . PASS END=131099457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1298:0,70,255:32,0 chr2 131099458 . C . PASS END=131099459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:37:0,84,1305:0,84,255:32,0 chr2 131099460 . G . PASS END=131099460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:28,0 chr2 131099461 . G . PASS END=131099463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,95,255:29,0 chr2 131099464 . C . PASS END=131099464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:28:35:0,28,1172:0,28,255:28,0 chr2 131099465 . C . PASS END=131099466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 131099467 . T . PASS END=131099467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:28,0 chr2 131099468 . A . PASS END=131099469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:28,0 chr2 131099470 . C . PASS END=131099471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:46:31:0,46,1053:0,46,255:27,0 chr2 131099472 . A . PASS END=131099473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 131099474 . T . PASS END=131099474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,970:0,46,255:27,0 chr2 131099475 . T . PASS END=131099475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131099476 . G . PASS END=131099476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,1016:0,21,255:27,0 chr2 131099477 . G . PASS END=131099477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 131099478 . C . PASS END=131099478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:27,0 chr2 131099479 . G . PASS END=131099480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131099481 . C . PASS END=131099483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1022:0,68,255:26,0 chr2 131099484 . T . PASS END=131099484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr2 131099485 . C . PASS END=131099487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:25,0 chr2 131099488 . G . PASS END=131099488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr2 131099489 . T . PASS END=131099489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:24,0 chr2 131099490 . A . PASS END=131099490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,930:0,37,255:23,0 chr2 131099491 . G . PASS END=131099517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,68,255:24,0 chr2 131099588 . C . PASS END=131099596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 131099597 . C . PASS END=131099600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 131099601 . G . PASS END=131099610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 131099611 . C . PASS END=131099611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 131099612 . C . PASS END=131099617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 131099618 . T . PASS END=131099618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 131099619 . T . PASS END=131099646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 131099647 . G . PASS END=131099648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 131099649 . A . PASS END=131099652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 131099653 . G . PASS END=131099653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 131099654 . C . PASS END=131099674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1033:0,87,255:30,0 chr2 131099675 . C . PASS END=131099676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 131099677 . C . PASS END=131099698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1119:0,83,255:33,0 chr2 131099707 . C . PASS END=131099728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:34,0 chr2 131099729 . T . PASS END=131099729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr2 131099730 . T . PASS END=131099742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1117:0,80,255:30,0 chr2 131099743 . C . PASS END=131099772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:25,0 chr2 131099773 . A . PASS END=131099802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,696:0,44,255:19,0 chr2 131100506 . A . PASS END=131100508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1272:0,81,255:36,0 chr2 131100659 . C . PASS END=131100661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131100662 . C . PASS END=131100666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 131100667 . C . PASS END=131100667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 131100668 . G . PASS END=131100676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:26,0 chr2 131100677 . C . PASS END=131100677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr2 131100678 . T . PASS END=131100713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:22:0,62,837:0,62,255:26,0 chr2 131100714 . A . PASS END=131100714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 131100715 . G . PASS END=131100738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,825:0,65,255:26,0 chr2 131100739 . G . PASS END=131100744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr2 131100745 . G . PASS END=131100745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:28,0 chr2 131100746 . C . PASS END=131100750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1088:0,90,255:31,0 chr2 131100751 . G . PASS END=131100751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 131100752 . C . PASS END=131100767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1074:0,80,255:36,0 chr2 131100843 . T . PASS END=131100920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:48:0,112,1784:0,112,255:40,0 chr2 131102202 . A . PASS END=131102298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,128,255:40,0 chr2 131102929 . G . PASS END=131103058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:28:0,81,1055:0,84,255:40,0 chr2 131103140 . G . PASS END=131103272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,110,1533:0,110,255:40,0 chr2 131103352 . T . PASS END=131103572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,100,1352:0,100,255:40,0 chr2 131103573 . T . PASS END=131103573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1443:0,74,255:35,0 chr2 131103574 . C . PASS END=131103712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:34:0,89,1350:0,89,255:40,0 chr2 131103736 . G . PASS END=131103783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:32:0,83,1225:0,83,255:39,0 chr2 131103784 . T . PASS END=131103784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:37,0 chr2 131103785 . A . PASS END=131103847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:38:0,85,1458:0,85,255:40,0 chr2 131103929 . T . PASS END=131104002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1156:0,83,255:35,0 chr2 131104003 . A . PASS END=131104041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,806:0,63,255:26,0 chr2 131113681 . A . PASS END=131113682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 131113683 . G . PASS END=131113737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 131113738 . G . PASS END=131113741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:8,0 chr2 131113742 . G A, 0.04 DRAGENSnpHardQUAL DP=8;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:5,1,0:2,0,0:20:15,0,50,36,250,286:15,0,239:7,0:4.2904e-02,2.0075e+01,7.3075e+01,5.5881e+01,3.0520e+02,3.0924e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,4,1,0:3,4,1,0 chr2 131113743 . G . PASS END=131113746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 131113747 . G . PASS END=131113747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 131113748 . G . PASS END=131113773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 131114173 . G . PASS END=131114173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 131114174 . A . PASS END=131114180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 131114181 . G . LowGQ END=131114181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:12,0 chr2 131114182 . G . PASS END=131114198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 131114199 . G . PASS END=131114212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 131114213 . C . PASS END=131114226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:14:0,32,495:0,32,255:12,0 chr2 131116440 . G . PASS END=131116442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 131116443 . A . PASS END=131116448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,829:0,66,255:23,0 chr2 131116449 . G . PASS END=131116449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr2 131116450 . C . PASS END=131116466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:24,0 chr2 131116467 . A . PASS END=131116467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 131116468 . A . PASS END=131116479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 131116480 . T . PASS END=131116480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 131116481 . G . PASS END=131116481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr2 131116482 . T . PASS END=131116523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,793:0,66,255:23,0 chr2 131116524 . A . PASS END=131116524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:20,0 chr2 131116525 . A . PASS END=131116536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 131116537 . A . PASS END=131116548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr2 131116806 . A . PASS END=131116817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:27,0 chr2 131116818 . G . PASS END=131116828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1080:0,90,255:30,0 chr2 131116829 . T . PASS END=131116829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 131116830 . C . PASS END=131116882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1133:0,87,255:40,0 chr2 131116970 . G . PASS END=131117004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,83,255:34,0 chr2 131117005 . A . PASS END=131117005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr2 131117006 . G . PASS END=131117045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,87,255:32,0 chr2 131117046 . T . PASS END=131117046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 131117047 . C . PASS END=131117047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr2 131117048 . T . PASS END=131117048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 131117049 . G . PASS END=131117051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 131117052 . A . PASS END=131117052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 131117053 . G . PASS END=131117053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 131117054 . T . PASS END=131117054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,835:0,70,255:28,0 chr2 131117055 . T . PASS END=131117058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr2 131117059 . G . PASS END=131117065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 131117181 . G . PASS END=131117202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:34:0,85,1156:0,85,255:34,0 chr2 131117203 . A . PASS END=131117204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:63:34:0,63,1119:0,63,255:33,0 chr2 131117205 . A . PASS END=131117206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1105:0,85,255:33,0 chr2 131117207 . A . PASS END=131117207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1142:0,71,255:32,0 chr2 131117208 . G . PASS END=131117209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1142:0,85,255:33,0 chr2 131117210 . G . PASS END=131117210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1072:0,69,255:30,0 chr2 131117211 . A . PASS END=131117216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:32,0 chr2 131117217 . C . PASS END=131117217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:28,0 chr2 131117218 . G . PASS END=131117219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:29,0 chr2 131126706 . A . PASS END=131126774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:31:0,87,1119:0,89,255:37,0 chr2 131127338 . A . PASS END=131127400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1139:0,80,255:37,0 chr2 131127621 . G . PASS END=131127622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 131127623 . G . PASS END=131127623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr2 131127624 . T . PASS END=131127634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,799:0,66,255:24,0 chr2 131127635 . G . PASS END=131127743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,994:0,81,255:40,0 chr2 131127744 . C . PASS END=131127744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:39,0 chr2 131127745 . C . PASS END=131127763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,107,1502:0,107,255:40,0 chr2 131128130 . T . PASS END=131128153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,854:0,62,255:26,0 chr2 131128154 . C . PASS END=131128164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:31,0 chr2 131128165 . T . PASS END=131128165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 131128166 . G . PASS END=131128188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1205:0,96,255:33,0 chr2 131128189 . T . PASS END=131128189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 131128190 . G . PASS END=131128196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 131128278 . A . PASS END=131128294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,550:0,45,255:16,0 chr2 131128295 . C . PASS END=131128297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr2 131128298 . T . PASS END=131128298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,519:0,9,255:11,0 chr2 131128299 . C . PASS END=131128347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:13,0 chr2 131128348 . A . PASS END=131128351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 131128352 . A . PASS END=131128352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131128353 . G . PASS END=131128355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 131128448 . G . PASS END=131128457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1177:0,80,255:34,0 chr2 131128458 . G . PASS END=131128458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr2 131128459 . G . PASS END=131128537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:34:0,102,1318:0,102,255:40,0 chr2 131128772 . A . PASS END=131128780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131128781 . C . PASS END=131128792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 131128793 . G . PASS END=131128795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 131128796 . G . PASS END=131128801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 131128802 . T . PASS END=131128811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131128812 . C . PASS END=131128840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 131128841 . C . PASS END=131128843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131128844 . C . PASS END=131128847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 131128848 . G . PASS END=131128859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131128860 . G . PASS END=131128860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 131129830 . G . PASS END=131129846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,397:0,36,255:13,0 chr2 131129847 . G . PASS END=131129860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:17,0 chr2 131129861 . G . PASS END=131129861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 131129862 . C . PASS END=131129864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,560:0,51,255:17,0 chr2 131129865 . T . PASS END=131129865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:17,0 chr2 131129866 . G . PASS END=131129869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 131129870 . G . PASS END=131129875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr2 131129876 . T . PASS END=131129877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,621:0,43,255:19,0 chr2 131129878 . C . PASS END=131129879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 131129880 . C . PASS END=131129881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 131129882 . G . PASS END=131129895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,701:0,63,255:21,0 chr2 131129896 . C . PASS END=131129896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr2 131129897 . G . PASS END=131129915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 131129916 . G . PASS END=131129916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 131129917 . G . PASS END=131129927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 131129928 . A . PASS END=131129940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 131129941 . G . PASS END=131129947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 131129948 . A . PASS END=131129948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 131129949 . C . PASS END=131129953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,837:0,66,255:22,0 chr2 131129954 . G . PASS END=131129954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 131129955 . C . PASS END=131129955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131129956 . G . PASS END=131129956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 131129957 . C . PASS END=131129957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131129958 . G . PASS END=131129958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 131129959 . C . PASS END=131129959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131129960 . A . PASS END=131129960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 131129961 . G . PASS END=131129961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:19,0 chr2 131129962 . C . PASS END=131129962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131129963 . G . PASS END=131129963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 131129964 . C . PASS END=131129965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131129966 . G . PASS END=131129966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 131129967 . A . PASS END=131129968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131129969 . G . PASS END=131129970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:30:21:0,30,690:0,30,255:19,0 chr2 131129971 . G . PASS END=131129971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 131129972 . G . PASS END=131129973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 131129974 . G . LowGQ END=131129974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,618:9,0,255:17,0 chr2 131129975 . C . PASS END=131129976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 131129977 . G . PASS END=131129977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:16,0 chr2 131129978 . C . PASS END=131129978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:15,0 chr2 131129979 . T . PASS END=131129982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,46,255:16,0 chr2 131129983 . C . PASS END=131129983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:15,0 chr2 131129984 . A . PASS END=131129984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:36:20:0,36,540:0,44,255:12,0 chr2 131129985 . G . PASS END=131129986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:19:0,21,615:0,21,255:12,0 chr2 131129987 . A . PASS END=131129990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:16:0,34,540:0,34,255:12,0 chr2 131129991 . T . PASS END=131129991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr2 131129992 . G . PASS END=131129994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 131129995 . G . PASS END=131129995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:10,0 chr2 131129996 . C . PASS END=131130004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 131130005 . C . PASS END=131130019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 131130020 . C . PASS END=131130033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr2 131130034 . G . PASS END=131130040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 131130041 . A . PASS END=131130041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:6,0 chr2 131130042 . C . PASS END=131130043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 131130044 . C . PASS END=131130056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:14:6:0,14,225:0,14,188:6,0 chr2 131130446 . T . PASS END=131130503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1238:0,86,255:36,0 chr2 131130504 . T . PASS END=131130504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr2 131130505 . C . PASS END=131130520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1172:0,83,255:32,0 chr2 131130730 . G . PASS END=131130797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1194:0,83,255:39,0 chr2 131132239 . G . PASS END=131132254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1058:0,90,255:30,0 chr2 131220389 . C . LowDepth;LowGQ END=131220418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131220419 . G . LowGQ END=131220584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,16:0,0,16:3,0 chr2 131220585 . T . PASS END=131220597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr2 131220598 . G . PASS END=131220603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr2 131220604 . T . PASS END=131220604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 131220605 . G . PASS END=131220626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr2 131220627 . G . PASS END=131220644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,433:0,36,255:13,0 chr2 131220645 . T . PASS END=131220645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 131220646 . T . PASS END=131220647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131220648 . C . PASS END=131220648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131220649 . G . PASS END=131220656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr2 131220657 . A . PASS END=131220657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 131220658 . C . PASS END=131220665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:17,0 chr2 131220666 . T . PASS END=131220666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,541:0,34,255:16,0 chr2 131220667 . T . PASS END=131220668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 131220669 . A . PASS END=131220669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 131220670 . T . PASS END=131220675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:18,0 chr2 131220676 . A . PASS END=131220676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 131220677 . G . PASS END=131220677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 131220678 . T . PASS END=131220679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,623:0,46,255:20,0 chr2 131220680 . G . PASS END=131220680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 131220681 . A . PASS END=131220682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 131220683 . G . PASS END=131220684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 131220685 . T . PASS END=131220686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,743:0,47,255:19,0 chr2 131220687 . G . PASS END=131220716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 131220717 . A . PASS END=131220717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 131220718 . G . PASS END=131220722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131220723 . C . PASS END=131220724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 131220725 . A . PASS END=131220732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131220733 . A . PASS END=131220758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,676:0,41,255:18,0 chr2 131220759 . T . PASS END=131220759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 131220760 . C . PASS END=131220771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 131220772 . T . PASS END=131220793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 131220794 . C . PASS END=131220794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 131220795 . T . PASS END=131220802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:11:0,21,315:0,33,255:9,0 chr2 131220803 . C . PASS END=131220810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:12:8:0,12,180:0,24,255:6,0 chr2 131220811 . G . LowGQ END=131220863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,3,0:3,0 chr2 131220864 . T A, 12.26 PASS DP=3;MQ=3.32;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,1,0:0,2,0:6:49,9,0,116,9,116:116,9,0:0,0:1.2263e+01,7.2628e+00,1.2336e+00,1.1456e+02,4.2033e+01,1.1756e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,1:0,0,2,1 chr2 131220865 . A . PASS END=131220901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr2 131220902 . C . PASS END=131220933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 131220934 . C . PASS END=131220978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 131220979 . G . PASS END=131220984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr2 131220985 . G . PASS END=131220988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 131220989 . C . PASS END=131220989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 131220990 . A . PASS END=131220990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 131220991 . G . PASS END=131220998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:17,0 chr2 131220999 . T . PASS END=131220999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 131221000 . G . PASS END=131221036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr2 131221037 . G . PASS END=131221037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,604:0,24,255:16,0 chr2 131221038 . G . PASS END=131221064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 131221065 . A . PASS END=131221071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 131221072 . T . PASS END=131221072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 131221073 . A . PASS END=131221074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr2 131221075 . T . PASS END=131221075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 131221076 . A . PASS END=131221087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,696:0,44,255:19,0 chr2 131221088 . G . PASS END=131221091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 131221092 . A . PASS END=131221092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 131221093 . G . PASS END=131221093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:19,0 chr2 131221094 . G . PASS END=131221094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131221095 . G . PASS END=131221095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:20,0 chr2 131221096 . A . PASS END=131221099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,725:0,63,255:21,0 chr2 131221100 . C . PASS END=131221100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 131221101 . A . PASS END=131221101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 131221102 . T C, 92.21 PASS DP=22;MQ=17.65;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,11,0:0,11,0:63:130,66,0,837,66,837:255,69,0:0,0:9.2208e+01,6.3208e+01,2.0709e-06,4.5000e+02,9.7978e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,7:0,0,12,10 chr2 131221103 . G . PASS END=131221104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 131221105 . C . PASS END=131221112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,832:0,69,255:24,0 chr2 131221113 . G . PASS END=131221113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 131221114 . C . PASS END=131221114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,895:0,45,255:27,0 chr2 131221115 . C . PASS END=131221115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 131221116 . A . PASS END=131221118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:29,0 chr2 131221119 . T . PASS END=131221121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:25,0 chr2 131221122 . A . PASS END=131221123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:29:0,51,976:0,51,255:25,0 chr2 131221124 . G . PASS END=131221132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,74,255:26,0 chr2 131221133 . G . PASS END=131221140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1066:0,82,255:29,0 chr2 131221141 . T . PASS END=131221141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr2 131221142 . C . PASS END=131221146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 131221147 . A . PASS END=131221149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr2 131221150 . T . PASS END=131221154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:31,0 chr2 131221155 . T . PASS END=131221155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:30,0 chr2 131221156 . G . PASS END=131221169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:32:0,88,1186:0,88,255:35,0 chr2 131221170 . C T, 132.85 PASS DP=37;MQ=23.33;FractionInformativeReads=0.946 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,18,0:0,17,0:102:171,105,0,271,271,271:255,108,0:0,0:1.3285e+02,1.0185e+02,0.0000e+00,2.6762e+02,3.0239e+02,2.7063e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,16:0,0,18,17 chr2 131221171 . G . PASS END=131221172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:36,0 chr2 131221173 . T . PASS END=131221173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1111:0,39,255:33,0 chr2 131221174 . T . PASS END=131221207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,107,1458:0,107,255:40,0 chr2 131221208 . G . PASS END=131221239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:40:0,107,1526:0,107,255:40,0 chr2 131221240 . C . PASS END=131221240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr2 131221241 . G . PASS END=131221279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,83,255:36,0 chr2 131221280 . C . PASS END=131221283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 131221284 . T . PASS END=131221284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,945:0,43,255:24,0 chr2 131221285 . T . PASS END=131221295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 131221296 . C . PASS END=131221306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,68,255:24,0 chr2 131221307 . G . PASS END=131221327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:19:0,45,675:0,57,255:18,0 chr2 131221328 . G . PASS END=131221328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 131221329 . C . PASS END=131221332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 131221333 . T . PASS END=131221333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:13,0 chr2 131221334 . C . PASS END=131221338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 131221339 . T . PASS END=131221352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 131221353 . C . PASS END=131221380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,227:0,21,227:9,0 chr2 131221381 . C . PASS END=131221387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 131221388 . C . PASS END=131221388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 131221389 . A . PASS END=131221391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 131221392 . C . PASS END=131221402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 131221403 . G . PASS END=131221403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr2 131221404 . G . PASS END=131221407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 131221408 . G . PASS END=131221411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 131221412 . C . PASS END=131221444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,141:0,15,141:6,0 chr2 131221445 . G A, 38.31 PASS DP=5;MQ=19.56;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,4,0:0,1,0:12:76,15,0,194,15,194:194,15,0:0,0:3.8312e+01,1.2312e+01,2.6358e-01,1.9113e+02,4.7082e+01,1.9413e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,5:0,0,1,4 chr2 131221446 . T . PASS END=131221463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,149:0,15,149:5,0 chr2 131221464 . T . PASS END=131221498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,94:3,0 chr2 131221499 . G A, 21.03 PASS DP=3;MQ=13.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,3,0:0,0,0:7:58,9,0,116,9,116:116,9,0:0,0:2.1031e+01,7.0312e+00,1.0021e+00,1.1416e+02,4.1801e+01,1.1716e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,3:0,0,0,3 chr2 131221500 . G . PASS END=131221536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:3:0,3,45:0,9,86:3,0 chr2 131221537 . G . LowDepth;LowGQ END=131221647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr2 131221648 . T . LowDepth;LowGQ END=131221717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131223225 . C . LowDepth;LowGQ END=131223345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131231951 . C . PASS END=131231973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr2 131231974 . G . LowGQ END=131231993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,78:0,0,104:3,0 chr2 131231994 . C . PASS END=131231996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 131231997 . G . PASS END=131232001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 131232002 . C . PASS END=131232010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 131232011 . C T, 23.33 PASS DP=5;MQ=10.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,5,0:1.000,0.000:5:0,2,0:0,3,0:12:61,15,0,186,15,186:186,15,0:0,0:2.3329e+01,1.2329e+01,2.8334e-01,1.8317e+02,4.7099e+01,1.8617e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,0:0,0,2,3 chr2 131232012 . T . PASS END=131232048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,186:0,15,186:6,0 chr2 131232049 . G . PASS END=131232132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,127:0,15,127:6,0 chr2 131232480 . C . PASS END=131232483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 131232484 . C . PASS END=131232484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 131232485 . T . PASS END=131232488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 131232489 . A . PASS END=131232489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 131232490 . C . PASS END=131232500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 131232501 . T . PASS END=131232501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 131232502 . A . PASS END=131232511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 131232512 . C . PASS END=131232524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:6:0,18,233:0,18,233:6,0 chr2 131234204 . C . LowDepth;LowGQ END=131234251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,31:1,0 chr2 131234252 . T . LowDepth;LowGQ END=131234274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131239576 . C . PASS END=131239646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,133:0,15,133:6,0 chr2 131245605 . C . PASS END=131245651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 131245652 . T . PASS END=131245675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr2 131245676 . T . PASS END=131245678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 131245679 . T . PASS END=131245685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 131245686 . T . PASS END=131245701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:6:0,12,180:0,18,202:6,0 chr2 131245702 . T . PASS END=131245712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:4:0,6,90:0,12,133:2,0 chr2 131245713 . C G, 23.57 PASS DP=4;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,4,0:1.000,0.000:4:0,0,0:0,4,0:9:61,12,0,155,12,155:155,12,0:0,0:2.3569e+01,9.5688e+00,5.2994e-01,1.5246e+02,4.4339e+01,1.5546e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,4:0,0,4,0 chr2 131245714 . T . PASS END=131245750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,70:0,6,70:2,0 chr2 131245751 . C . PASS END=131245774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr2 131246808 . C . LowDepth;LowGQ END=131246809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131246810 . C . LowDepth END=131246852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 131248243 . C . LowDepth;LowGQ END=131248264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131248265 . C . LowDepth END=131248313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 131254125 . C . PASS END=131254128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 131254129 . A . PASS END=131254129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 131254130 . T . PASS END=131254162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:13,0 chr2 131254163 . T . PASS END=131254174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:19,0 chr2 131254175 . T . PASS END=131254177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 131254178 . G . PASS END=131254179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,698:0,44,255:20,0 chr2 131254180 . A . PASS END=131254180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 131254181 . A . PASS END=131254181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 131254182 . G . PASS END=131254186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,768:0,63,255:22,0 chr2 131254187 . T . PASS END=131254187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 131254188 . G . PASS END=131254195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 131256657 . A . LowDepth;LowGQ END=131256794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr2 131258109 . C . PASS END=131258213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:81:31:0,81,1215:0,93,255:40,0 chr2 131258214 . T . PASS END=131258215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr2 131261013 . C . LowDepth;LowGQ END=131261153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131261154 . C . LowDepth;LowGQ END=131261192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131261323 . C . LowDepth;LowGQ END=131261467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131266288 . C . PASS END=131266298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 131266299 . G . PASS END=131266315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 131266316 . C . PASS END=131266317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 131266318 . G . PASS END=131266326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 131266327 . A . PASS END=131266371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr2 131266372 . G . PASS END=131266393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,892:0,62,255:26,0 chr2 131266394 . C . PASS END=131266397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 131266398 . T . PASS END=131266398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:26,0 chr2 131266399 . C . PASS END=131266492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1086:0,84,255:40,0 chr2 131266493 . A . PASS END=131266529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,120,1800:0,188,255:40,0 chr2 131266530 . C A, 301.77 PASS DP=86;MQ=65.21;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,86,0:1.000,0.000:86:0,45,0:0,41,0:254:340,257,0,3170,257,3170:255,255,0:0,0:3.0177e+02,2.5397e+02,0.0000e+00,4.5000e+02,2.8874e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,52:0,0,43,43 chr2 131266531 . G . PASS END=131266567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:84:0,120,1800:0,213,255:40,0 chr2 131266568 . C . PASS END=131266684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:83:35:0,83,1305:0,83,255:40,0 chr2 131266685 . T . PASS END=131266696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,1035:0,60,255:25,0 chr2 131266697 . T . PASS END=131266707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:47:26:0,47,720:0,47,255:18,0 chr2 131266708 . C . PASS END=131266709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:20,0 chr2 131266710 . G . PASS END=131266729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 131266730 . A . PASS END=131266781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,457:0,36,255:13,0 chr2 131266782 . C . PASS END=131266786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr2 131266787 . T . PASS END=131266808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,194:5,0 chr2 131279058 . A . LowDepth;LowGQ END=131279080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131279386 . G . LowDepth;LowGQ END=131279435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131279530 . G . LowDepth;LowGQ END=131279703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131280363 . G . LowDepth;LowGQ END=131280477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131280742 . T . LowDepth;LowGQ END=131280851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131285269 . A . LowDepth;LowGQ END=131285487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131297394 . T . LowDepth;LowGQ END=131297708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131300027 . C . LowDepth;LowGQ END=131300067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131300377 . C . LowDepth;LowGQ END=131300527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131301456 . T . LowDepth;LowGQ END=131301631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131303766 . C . LowDepth;LowGQ END=131303964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131331926 . A . PASS END=131332124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:66:0,120,1800:0,182,255:40,2 chr2 131334246 . T . PASS END=131334294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,117:0,12,117:6,0 chr2 131334295 . G . PASS END=131334324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 131334325 . G . PASS END=131334330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 131334331 . G . PASS END=131334350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 131334351 . G . PASS END=131334353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 131334354 . G . PASS END=131334430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:9,0 chr2 131334431 . C . PASS END=131334431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:6,0 chr2 131334432 . T . PASS END=131334445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 131334446 . C . PASS END=131334473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr2 131334474 . G . PASS END=131334474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 131334475 . T . PASS END=131334479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 131334480 . T . PASS END=131334480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131334481 . C . PASS END=131334481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 131334482 . T . PASS END=131334494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr2 131334495 . A . PASS END=131334500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131334501 . G . PASS END=131334501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 131334502 . A . PASS END=131334502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131334503 . C . PASS END=131334523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,558:0,45,255:16,0 chr2 131334524 . G . PASS END=131334524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 131334525 . C . PASS END=131334529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 131335812 . T . LowDepth;LowGQ END=131335852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131338169 . C . PASS END=131338179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 131338180 . G . PASS END=131338191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:7,0 chr2 131338192 . C . PASS END=131338192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 131338193 . T . PASS END=131338202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 131339831 . C . LowDepth;LowGQ END=131339931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131350431 . T . LowGQ END=131350575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,0:3,0 chr2 131350576 . C . PASS END=131350611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr2 131350612 . C . PASS END=131350649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr2 131355067 . C . LowDepth;LowGQ END=131355176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131355441 . C . LowDepth;LowGQ END=131355555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131355789 . T . PASS END=131355800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 131355801 . G . PASS END=131355814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 131355815 . C . PASS END=131355815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 131355816 . T . PASS END=131355818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 131355819 . T . PASS END=131355819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 131355820 . G . PASS END=131355821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,349:0,27,255:9,0 chr2 131355822 . G . PASS END=131355829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 131355830 . A . PASS END=131355831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 131355832 . C . PASS END=131355832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr2 131355833 . C . PASS END=131355835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,205:0,21,205:7,0 chr2 131355836 . G . PASS END=131355836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 131355837 . G . PASS END=131355841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 131355842 . G . PASS END=131355842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 131355843 . A . PASS END=131355843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 131355844 . T . PASS END=131355844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 131355845 . G . PASS END=131355852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 131355853 . A . LowGQ END=131355853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,239:4,0,243:8,0 chr2 131355854 . C . PASS END=131355860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 131355861 . G . PASS END=131355872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:12,0 chr2 131355873 . C . PASS END=131355874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 131355875 . G . PASS END=131355885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 131355886 . G . PASS END=131355892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr2 131355893 . A . PASS END=131355893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 131355894 . G . PASS END=131355895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 131355896 . A . PASS END=131355896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 131355897 . G . PASS END=131355903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:17,0 chr2 131355904 . A . PASS END=131355904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 131355905 . A . PASS END=131355908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,522:0,51,255:17,0 chr2 131355909 . T . PASS END=131355909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:17,0 chr2 131355910 . C . PASS END=131355920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,645:0,41,255:19,0 chr2 131355921 . T . PASS END=131355921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr2 131355922 . T . PASS END=131355929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,627:0,40,255:19,0 chr2 131355930 . G . PASS END=131355930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 131355931 . A . PASS END=131355936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,631:0,41,255:19,0 chr2 131355937 . A . PASS END=131355937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr2 131355938 . T . PASS END=131355954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:19,0 chr2 131355955 . T . PASS END=131355955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 131355956 . C . PASS END=131355970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,569:0,41,255:18,0 chr2 131356215 . C . PASS END=131356353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:37:0,80,1215:0,80,255:40,0 chr2 131356354 . C . PASS END=131356354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1196:0,53,255:26,0 chr2 131356355 . T . PASS END=131356355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 131356356 . C . PASS END=131356369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:27:0,60,900:0,64,255:26,0 chr2 131356370 . T . PASS END=131356373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:26:0,42,630:0,78,255:19,0 chr2 131356374 . T . PASS END=131356383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:33:18:0,33,495:0,52,255:13,0 chr2 131356384 . A . PASS END=131356386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 131356387 . G . PASS END=131356387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr2 131356388 . C . PASS END=131356388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 131356483 . T . PASS END=131356515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 131356516 . T . PASS END=131356518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131356519 . C . PASS END=131356522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 131356523 . A . PASS END=131356523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 131356524 . A . PASS END=131356525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 131356526 . C . PASS END=131356528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 131356529 . A . PASS END=131356529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:8,0 chr2 131356530 . A . PASS END=131356532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 131356838 . C . LowDepth END=131356860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 131369106 . A . PASS END=131369116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 131369117 . G . PASS END=131369139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr2 131369140 . C . PASS END=131369140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 131369141 . T . PASS END=131369168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:16,0 chr2 131369169 . A . PASS END=131369172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131369173 . A . PASS END=131369184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,596:0,48,255:19,0 chr2 131369185 . G . PASS END=131369207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:27,0 chr2 131369208 . T . PASS END=131369213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 131369214 . G . PASS END=131369214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 131369215 . G . PASS END=131369222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:36,0 chr2 131369223 . A . PASS END=131369223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:34,0 chr2 131369224 . A . PASS END=131369226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1620:0,114,255:38,0 chr2 131369227 . G . PASS END=131369227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1302:0,53,255:35,0 chr2 131369228 . C . PASS END=131369478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:30:0,81,1111:0,83,255:40,0 chr2 131369479 . G . PASS END=131369481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 131369482 . A . PASS END=131369482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131369483 . C . PASS END=131369486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 131369487 . G . PASS END=131369487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 131369488 . A . PASS END=131369491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 131369492 . G . PASS END=131369492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 131369493 . A . PASS END=131369497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:28:0,78,1170:0,84,255:26,0 chr2 131369498 . G . PASS END=131369498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr2 131369499 . C . PASS END=131369501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 131369502 . G . PASS END=131369504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 131369505 . A . PASS END=131369505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:26,0 chr2 131369506 . A . PASS END=131369510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 131369511 . A . PASS END=131369512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 131369513 . G . PASS END=131369513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131369514 . A . PASS END=131369515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1000:0,70,255:26,0 chr2 131374363 . G . LowDepth;LowGQ END=131374507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131374638 . G . LowDepth;LowGQ END=131374676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131374677 . C . LowDepth;LowGQ END=131374811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131377618 . C . PASS END=131377619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr2 131377620 . T . PASS END=131377620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 131377621 . G . PASS END=131377627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 131377628 . C . PASS END=131377631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 131377632 . A . PASS END=131377641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,397:0,36,255:12,0 chr2 131377642 . G . PASS END=131377642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr2 131377643 . G . PASS END=131377645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,480:0,39,255:13,0 chr2 131377646 . T . PASS END=131377646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 131377647 . A . PASS END=131377648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 131377649 . A . PASS END=131377649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 131377650 . T . PASS END=131377650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 131377651 . G . PASS END=131377651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 131377652 . A . PASS END=131377660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 131377661 . A . PASS END=131377663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131377664 . A . PASS END=131377664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 131377665 . A . PASS END=131377669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 131377670 . T . PASS END=131377670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131377671 . G . PASS END=131377671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 131377672 . A . PASS END=131377672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 131377673 . A . PASS END=131377675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 131377676 . T . PASS END=131377706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 131377707 . A G, 54.21 PASS DP=13;MQ=12.76;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,10,0:0,3,0:35:92,38,0,441,38,441:255,39,0:0,0:5.4209e+01,3.5209e+01,1.3258e-03,4.3853e+02,6.9979e+01,4.4154e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,12:0,0,4,9 chr2 131377708 . C . PASS END=131377724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,310:0,24,255:8,0 chr2 131379039 . A . PASS END=131379042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,992:0,78,255:26,0 chr2 131379043 . G . PASS END=131379176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,980:0,81,255:40,0 chr2 131381637 . A . PASS END=131381663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1372:0,81,255:40,0 chr2 131381664 . A . PASS END=131381664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,983:0,33,255:30,0 chr2 131381665 . G . PASS END=131381683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1166:0,85,255:33,0 chr2 131381684 . T . PASS END=131381684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1078:0,69,255:32,0 chr2 131381685 . C . PASS END=131381696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1156:0,83,255:32,0 chr2 131381697 . C . PASS END=131381705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:29:0,63,945:0,71,255:27,0 chr2 131381706 . A . PASS END=131381706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:21,0 chr2 131381707 . G . PASS END=131381707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr2 131387522 . A . LowDepth;LowGQ END=131387592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr2 131388982 . A . PASS END=131389014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,280:0,27,238:9,0 chr2 131389015 . G . PASS END=131389016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 131389017 . T . PASS END=131389020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131389021 . A . PASS END=131389021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:8,0 chr2 131389022 . G . PASS END=131389022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131389023 . A . PASS END=131389026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:10:9:0,10,263:0,10,255:6,0 chr2 131390063 . G . PASS END=131390065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 131390066 . G . PASS END=131390067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131390068 . A . PASS END=131390068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 131390069 . G . PASS END=131390072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131390073 . A . PASS END=131390081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 131390082 . A . PASS END=131390083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:31:16:0,31,535:0,31,255:17,0 chr2 131390084 . C . PASS END=131390084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 131390085 . A . PASS END=131390097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:19,0 chr2 131390098 . T . PASS END=131390103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 131390104 . A . PASS END=131390104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 131390105 . T . PASS END=131390105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,643:0,27,255:18,0 chr2 131390106 . T . PASS END=131390108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 131390109 . T . PASS END=131390120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr2 131390121 . G C, 0.09 DRAGENSnpHardQUAL DP=20;MQ=13.75;MQRankSum=2.329;ReadPosRankSum=0.847;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:17,3,0:0.150,0.000:20:9,1,0:8,2,0:17:18,0,28,107,608,715:70,0,255:14,0:8.7945e-02,1.6983e+01,4.7983e+01,1.2424e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,9,0,3:8,9,2,1 chr2 131390122 . T . PASS END=131390122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:15,0 chr2 131390123 . A . PASS END=131390131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:17,0 chr2 131390132 . A . PASS END=131390132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr2 131390133 . C . PASS END=131390137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 131390138 . G . PASS END=131390143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 131390144 . G . PASS END=131390148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131390149 . T . PASS END=131390149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 131390150 . G . PASS END=131390151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,488:0,6,255:14,0 chr2 131390152 . T . PASS END=131390152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 131390153 . G . PASS END=131390158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 131390159 . A . PASS END=131390161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131390162 . C . PASS END=131390162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:13,0 chr2 131390163 . C . PASS END=131390167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131390168 . A . PASS END=131390168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,335:0,9,255:11,0 chr2 131390169 . G . PASS END=131390176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 131390177 . A . PASS END=131390177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,413:0,3,255:11,0 chr2 131390178 . G . PASS END=131390178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 131390179 . A . PASS END=131390179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 131390180 . A . PASS END=131390206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 131390207 . A . PASS END=131390207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 131390208 . A . PASS END=131390221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr2 131390222 . T . PASS END=131390229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 131396192 . A . PASS END=131396195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1007:0,84,255:28,0 chr2 131396196 . T . PASS END=131396196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 131396197 . G . PASS END=131396200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr2 131396201 . A . PASS END=131396202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,991:0,71,255:27,0 chr2 131396203 . T . PASS END=131396203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 131396204 . A . PASS END=131396204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1007:0,73,255:28,0 chr2 131396205 . G . PASS END=131396207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 131396208 . T . PASS END=131396219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:25:0,63,818:0,75,255:25,0 chr2 131396220 . G . PASS END=131396240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr2 131396241 . T . PASS END=131396247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr2 131396248 . A . PASS END=131396250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131396251 . A . PASS END=131396254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr2 131396255 . C . PASS END=131396262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:29,0 chr2 131401556 . A . PASS END=131401574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 131401575 . A . PASS END=131401605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr2 131401606 . A . LowGQ END=131401606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:4,0 chr2 131401607 . G . PASS END=131401623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,178:0,15,172:5,0 chr2 131401624 . G . LowGQ END=131401624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 131401625 . A . PASS END=131401626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:4,0 chr2 131403310 . A . PASS END=131403315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 131403316 . T . PASS END=131403316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,389:0,25,255:13,0 chr2 131403317 . C . PASS END=131403317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 131403318 . T . PASS END=131403318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 131403319 . C . PASS END=131403342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,482:0,42,255:15,0 chr2 131403343 . G . PASS END=131403343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:14,0 chr2 131403344 . G . PASS END=131403349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131403350 . G . PASS END=131403352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 131403353 . A . PASS END=131403353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 131403354 . G . PASS END=131403354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 131403702 . C . PASS END=131403710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 131403711 . T . PASS END=131403711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:11,0 chr2 131403712 . T . PASS END=131403754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr2 131403755 . C . PASS END=131403776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:15,0 chr2 131403777 . A . PASS END=131403777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 131403778 . A . PASS END=131403789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr2 131403790 . C . PASS END=131403811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 131403812 . A . PASS END=131403812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 131403813 . A . PASS END=131403821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 131403822 . A . PASS END=131403822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr2 131403823 . G . PASS END=131403851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 131403852 . T . PASS END=131403879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 131403880 . A . PASS END=131403883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 131412494 . T . PASS END=131412503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:17,0 chr2 131412504 . A . PASS END=131412504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:16,0 chr2 131412505 . A . PASS END=131412505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 131412506 . T . PASS END=131412506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 131412507 . G . PASS END=131412517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr2 131412518 . G . PASS END=131412519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 131412520 . A . PASS END=131412577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,630:0,41,255:18,0 chr2 131412578 . A . PASS END=131412610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:32:11:0,32,374:0,32,255:13,0 chr2 131412611 . T . PASS END=131412611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 131412612 . G . PASS END=131412614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 131414122 . C . PASS END=131414138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:48:0,120,1800:0,144,255:40,0 chr2 131414139 . G . PASS END=131414175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,158,255:40,0 chr2 131414176 . C T, 38.84 PASS DP=86;MQ=50.76;MQRankSum=-2.495;ReadPosRankSum=2.852;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:49,37,0:0.430,0.000:86:28,19,0:21,18,0:39:74,0,47,1323,1736,3060:255,0,255:40,0:3.8844e+01,6.1173e-04,4.9851e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:38,11,27,10:27,22,23,14 chr2 131414177 . G . PASS END=131414213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,231,255:40,0 chr2 131414214 . A . PASS END=131414356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:90:0,120,1800:0,241,255:40,2 chr2 131414357 . A . PASS END=131414393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:78:0,120,1800:0,224,255:40,0 chr2 131414394 . C T, 14.32 PASS DP=79;MQ=33.17;MQRankSum=-3.490;ReadPosRankSum=1.748;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:58,21,0:0.266,0.000:79:35,14,0:23,7,0:14:49,0,41,713,2050,2763:255,0,255:40,0:1.4318e+01,1.6390e-01,4.4164e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,35,5,16:30,28,10,11 chr2 131414395 . G . PASS END=131414430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,171,255:40,0 chr2 131414431 . T . LowGQ END=131414431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,8:65:0:65:0,0,1844:115,0,255:40,0 chr2 131414432 . G . PASS END=131414468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,120,1800:0,126,255:40,0 chr2 131414469 . G . PASS END=131414715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:33:0,80,1215:0,80,255:40,0 chr2 131414716 . A . PASS END=131414736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,63,255:25,0 chr2 131414737 . A . LowGQ END=131414737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,712:0,0,255:19,0 chr2 131414738 . T . PASS END=131414740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 131414741 . T . PASS END=131414758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:21:0,45,675:0,56,255:19,0 chr2 131414759 . G . PASS END=131414759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:15,0 chr2 131414760 . C . PASS END=131414768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:17,0 chr2 131414769 . T . PASS END=131414769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 131414770 . G . PASS END=131414798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,623:0,40,255:18,0 chr2 131414799 . C . PASS END=131414808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,759:0,60,255:20,0 chr2 131414809 . G . PASS END=131414815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 131414816 . T . PASS END=131414833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 131414834 . T . PASS END=131414834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 131414835 . C . PASS END=131414849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:25,0 chr2 131414850 . G . PASS END=131414850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:23,0 chr2 131414851 . C . PASS END=131414860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr2 131414861 . T . PASS END=131414861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:24,0 chr2 131414862 . G . PASS END=131414865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,917:0,62,255:25,0 chr2 131414866 . G . PASS END=131414866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 131414867 . G . PASS END=131414881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,964:0,84,255:28,0 chr2 131414882 . A . PASS END=131414886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 131414887 . C . PASS END=131414887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:22,0 chr2 131414888 . T . PASS END=131414894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:25,0 chr2 131414895 . G . PASS END=131414901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1025:0,87,255:29,0 chr2 131414902 . A . PASS END=131414902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 131414903 . C . PASS END=131414913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:34,0 chr2 131414914 . T . PASS END=131414914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:32,0 chr2 131414915 . A . PASS END=131414920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1262:0,87,255:39,0 chr2 131414921 . T . PASS END=131414921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr2 131414922 . C . PASS END=131414937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1327:0,84,255:40,0 chr2 131414938 . C . PASS END=131414974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1413:0,81,255:40,0 chr2 131414975 . A T, 0.05 DRAGENSnpHardQUAL DP=46;MQ=31.97;MQRankSum=-3.572;ReadPosRankSum=3.461;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:37,9,0:0.196,0.000:46:23,3,0:14,6,0:19:16,0,40,322,1249,1571:208,0,255:36,0:5.1773e-02,1.9263e+01,6.2388e+01,3.4116e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,16,1,8:15,22,5,4 chr2 131414976 . T . PASS END=131415007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,104,1487:0,104,255:40,0 chr2 131415008 . T . LowGQ END=131415008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,8:48:0:48:0,0,1194:166,0,255:36,0 chr2 131415009 . G . PASS END=131415045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,114,1670:0,114,255:40,0 chr2 131415046 . C . PASS END=131415115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:34:0,85,1395:0,85,255:40,0 chr2 131415116 . G . PASS END=131415116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:30,0 chr2 131415117 . C . PASS END=131415133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:32,0 chr2 131415134 . C . PASS END=131415134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 131415135 . C . PASS END=131415140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 131415141 . C . PASS END=131415160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,892:0,61,255:27,0 chr2 131415161 . A . PASS END=131415161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:22,0 chr2 131415162 . C . PASS END=131415175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,914:0,72,255:24,0 chr2 131415176 . C . PASS END=131415176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 131415177 . T . PASS END=131415178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 131415179 . A . PASS END=131415179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 131415180 . T . PASS END=131415183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 131415184 . G . PASS END=131415184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 131415185 . A . PASS END=131415193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 131415194 . A . PASS END=131415201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:21:0,45,675:0,55,255:18,0 chr2 131415202 . T . PASS END=131415203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 131415204 . C . PASS END=131415212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr2 131415213 . A . PASS END=131415216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 131415217 . C . PASS END=131415217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 131415218 . T . PASS END=131415218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr2 131415219 . G . PASS END=131415227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 131415228 . C . PASS END=131415248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,459:0,36,255:13,0 chr2 131415249 . G . PASS END=131415257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 131415258 . A . PASS END=131415259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131415260 . T . PASS END=131415260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 131415261 . G . PASS END=131415270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 131415271 . A . PASS END=131415271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 131415272 . T . PASS END=131415287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 131415288 . T . PASS END=131415299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131415300 . G . PASS END=131415322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 131415323 . A . PASS END=131415325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,233:5,0 chr2 131415326 . G . PASS END=131415336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:9:4:0,9,135:0,12,133:3,0 chr2 131415337 . G A, 10.43 PASS DP=4;MQ=15.21;MQRankSum=0.000;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,2,0:0.500,0.000:4:0,1,0:2,1,0:10:45,0,22,64,72,135:57,0,66:2,0:1.0426e+01,4.2642e-01,2.5417e+01,6.3949e+01,1.0674e+02,1.3850e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,2,1,1:2,0,2,0 chr2 131415338 . T . PASS END=131415374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,78:3,0 chr2 131415375 . C . LowDepth;LowGQ END=131415450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr2 131486725 . A . PASS END=131486734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,435:0,39,255:13,0 chr2 131486735 . A . PASS END=131486755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:19,0 chr2 131486756 . G . PASS END=131486772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,767:0,60,255:25,0 chr2 131486773 . G . PASS END=131486798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 131486799 . A . PASS END=131486819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,954:0,68,255:26,0 chr2 131486820 . C . PASS END=131486820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 131486821 . A . PASS END=131486877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,870:0,61,255:26,0 chr2 131486878 . C . PASS END=131486878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,784:0,45,255:20,0 chr2 131486879 . T . PASS END=131486882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr2 131486883 . C . PASS END=131486883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr2 131486884 . C . PASS END=131486893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:23,0 chr2 131486894 . G . PASS END=131486894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 131486895 . C . PASS END=131486896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 131486897 . T . PASS END=131486905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr2 131486906 . C . PASS END=131486914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,892:0,69,255:23,0 chr2 131486915 . T . PASS END=131486915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 131486916 . G . PASS END=131486934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,831:0,69,255:23,0 chr2 131486935 . C . PASS END=131486935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 131486936 . T . PASS END=131486943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 131486944 . A . PASS END=131486944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 131486945 . T . PASS END=131486996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,701:0,63,255:26,0 chr2 131486997 . C . PASS END=131487000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 131487001 . C . PASS END=131487005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 131487006 . C . PASS END=131487033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1177:0,80,255:30,0 chr2 131487034 . A . PASS END=131487034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 131487035 . T . PASS END=131487041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 131487042 . C . PASS END=131487076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,969:0,65,255:28,0 chr2 131487077 . G . PASS END=131487077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr2 131487078 . C . PASS END=131487085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,953:0,65,255:26,0 chr2 131487086 . G . PASS END=131487088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 131487089 . G . PASS END=131487089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:27,0 chr2 131487090 . C . PASS END=131487090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 131487091 . A . PASS END=131487091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr2 131487092 . T . PASS END=131487093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 131487094 . C . PASS END=131487094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 131487095 . T . PASS END=131487103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 131487104 . C . PASS END=131487104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 131487105 . T . PASS END=131487107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1085:0,87,255:31,0 chr2 131487108 . C . PASS END=131487108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 131487109 . T . PASS END=131487158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1149:0,92,255:35,0 chr2 131487159 . C . PASS END=131487225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr2 131487226 . G . PASS END=131487226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:20,0 chr2 131487227 . C . PASS END=131487304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,930:0,62,255:26,0 chr2 131487305 . T . PASS END=131487305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 131487306 . G . PASS END=131487306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 131487307 . G . PASS END=131487308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr2 131487309 . G . PASS END=131487310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 131487311 . A . PASS END=131487311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1131:0,90,255:30,0 chr2 131487312 . G . PASS END=131487312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 131487313 . C . PASS END=131487315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 131487316 . G . PASS END=131487316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 131487317 . G . PASS END=131487340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1092:0,80,255:34,0 chr2 131487341 . G . PASS END=131487341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1202:0,58,255:33,0 chr2 131487342 . C . PASS END=131487384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1174:0,86,255:36,0 chr2 131487385 . T . PASS END=131487385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1209:0,64,255:30,0 chr2 131487386 . A . PASS END=131487392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:29,0 chr2 131487393 . C . PASS END=131487393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 131487394 . A . PASS END=131487395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 131487396 . T . PASS END=131487396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 131487397 . C . PASS END=131487439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1111:0,87,255:32,0 chr2 131487440 . T . PASS END=131487440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 131487441 . C . PASS END=131487441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 131487442 . T . PASS END=131487442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:29,0 chr2 131487443 . G . PASS END=131487443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 131487444 . G . PASS END=131487444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 131487445 . A . PASS END=131487445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 131487446 . G . PASS END=131487446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 131487447 . G . PASS END=131487470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:32,0 chr2 131487471 . A . PASS END=131487475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 131487476 . T . PASS END=131487484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 131487485 . A . PASS END=131487485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:28,0 chr2 131487486 . G . PASS END=131487506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1094:0,90,255:30,0 chr2 131487507 . C . PASS END=131487512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 131487513 . G . PASS END=131487528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1202:0,83,255:31,0 chr2 131487529 . C . PASS END=131487529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:30,0 chr2 131487530 . T . PASS END=131487550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1180:0,92,255:35,0 chr2 131487551 . C . PASS END=131487552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 131487553 . G . PASS END=131487571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1195:0,96,255:33,0 chr2 131487572 . A . PASS END=131487572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr2 131487573 . C . PASS END=131487619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:33,0 chr2 131487620 . G . PASS END=131487624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 131487625 . C . PASS END=131487633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1023:0,81,255:27,0 chr2 131487634 . A . PASS END=131487634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 131487635 . A . PASS END=131487635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131487636 . C . PASS END=131487637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 131487638 . G . PASS END=131487638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 131487639 . T . PASS END=131487646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 131487647 . T . PASS END=131487647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 131487648 . C . PASS END=131487658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1127:0,93,255:31,0 chr2 131487659 . C . PASS END=131487669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:28:0,68,1022:0,68,255:26,0 chr2 131487670 . C . PASS END=131487671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131487672 . C . PASS END=131487672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 131487673 . A C, 131.27 PASS DP=28;MQ=249.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,19,0:0,9,0:81:169,84,0,1085,84,1085:255,84,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,17:0,0,14,14 chr2 131487674 . C . PASS END=131487674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131487675 . A . PASS END=131487703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,937:0,62,255:25,0 chr2 131487704 . T . PASS END=131487704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 131487705 . G . PASS END=131487708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131487709 . G . PASS END=131487710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 131487711 . C . PASS END=131487712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131487713 . T . PASS END=131487713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:18,0 chr2 131487714 . G . PASS END=131487714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:18,0 chr2 131487715 . G . PASS END=131487717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131487718 . C . PASS END=131487721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 131487722 . G . PASS END=131487722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,699:0,27,255:17,0 chr2 131487723 . C . PASS END=131487763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:16:0,41,576:0,41,255:19,0 chr2 131487764 . C . PASS END=131487764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 131487765 . C . PASS END=131487767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,553:0,48,255:16,0 chr2 131487768 . G . PASS END=131487768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 131519646 . A . PASS END=131519648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,713:0,57,255:19,0 chr2 131519649 . G . PASS END=131519664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:22,0 chr2 131519665 . A . PASS END=131519667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr2 131519668 . C . PASS END=131519702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,809:0,69,255:24,0 chr2 131519703 . A . PASS END=131519703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 131519704 . A . PASS END=131519716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 131519717 . A . PASS END=131519740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:17,0 chr2 131519741 . G . PASS END=131519754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,466:0,39,255:13,0 chr2 131519755 . G . PASS END=131519758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,488:0,42,255:14,0 chr2 131519759 . A . PASS END=131519776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 131519777 . A . PASS END=131519777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131519778 . C . PASS END=131519778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 131519779 . A . PASS END=131519783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 131519784 . C . PASS END=131519784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 131519785 . C . PASS END=131519792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,521:0,45,255:16,0 chr2 131519793 . G . PASS END=131519793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 131519794 . A . PASS END=131519798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 131519799 . G . PASS END=131519799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 131519800 . G . PASS END=131519824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:19,0 chr2 131519825 . A . PASS END=131519825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,706:0,29,255:17,0 chr2 131519826 . G . PASS END=131519830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr2 131519831 . C . PASS END=131519831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr2 131519832 . G . PASS END=131519833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 131519834 . C . PASS END=131519834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 131519835 . A . PASS END=131519835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:18,0 chr2 131519836 . G . PASS END=131519840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,725:0,60,255:21,0 chr2 131519841 . C . PASS END=131519863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 131519864 . C . PASS END=131519868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,751:0,60,255:20,0 chr2 131519869 . A . PASS END=131519869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 131519870 . A . PASS END=131519887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,861:0,63,255:26,0 chr2 131519888 . C . PASS END=131519894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 131519895 . G . PASS END=131519963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,834:0,65,255:26,0 chr2 131519964 . G . PASS END=131519969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr2 131519970 . G . PASS END=131519970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131519971 . G . PASS END=131519972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 131519973 . C . PASS END=131519973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131519974 . A . PASS END=131519975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 131519976 . C . PASS END=131519983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131519984 . C . PASS END=131519992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,765:0,50,255:19,0 chr2 131519993 . C . PASS END=131519993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 131519994 . T . PASS END=131519994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 131519995 . T . PASS END=131519997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:22,0 chr2 131519998 . C . PASS END=131519998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 131519999 . G . PASS END=131520001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 131520002 . C . PASS END=131520002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 131520003 . T . PASS END=131520021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr2 131520022 . T . PASS END=131520028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 131520029 . C . PASS END=131520035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr2 131520036 . C . PASS END=131520036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 131520037 . A . PASS END=131520050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:22,0 chr2 131520051 . A . PASS END=131520065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,721:0,47,255:19,0 chr2 131520066 . G . PASS END=131520067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 131520068 . T . PASS END=131520131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr2 131520132 . C . PASS END=131520133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 131520134 . A . PASS END=131520157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:17,0 chr2 131520158 . T . PASS END=131520158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 131520159 . G . PASS END=131520164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr2 131520165 . T . PASS END=131520165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 131520166 . T . PASS END=131520166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 131520167 . G . PASS END=131520171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 131520172 . C . PASS END=131520172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 131520173 . G . PASS END=131520179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr2 131520180 . G . PASS END=131520180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 131520181 . C . PASS END=131520181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 131520182 . C . PASS END=131520182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 131520183 . G . PASS END=131520196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:19,0 chr2 131520197 . G . PASS END=131520199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131520200 . C . PASS END=131520200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 131520201 . T . PASS END=131520201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:18,0 chr2 131520202 . C . PASS END=131520203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131520204 . C . PASS END=131520204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 131520205 . C . PASS END=131520208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131520209 . G . PASS END=131520213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 131520214 . C . PASS END=131520222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr2 131520223 . C . PASS END=131520223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 131520224 . T . PASS END=131520224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,4:25:9:25:0,9,740:0,9,255:21,0 chr2 131520225 . G . PASS END=131520229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr2 131520230 . G . PASS END=131520230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 131520231 . C . PASS END=131520243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 131520244 . C . PASS END=131520248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 131520249 . C . PASS END=131520262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr2 131520263 . G . PASS END=131520263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 131520264 . G . PASS END=131520264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 131520265 . G . PASS END=131520269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr2 131520270 . G . PASS END=131520270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1062:0,60,255:27,0 chr2 131520271 . G . PASS END=131520283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 131520284 . G . PASS END=131520284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 131520285 . T . PASS END=131520292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 131520293 . C . PASS END=131520333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr2 131520334 . T . PASS END=131520359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:20:0,41,720:0,41,255:19,0 chr2 131520360 . G . PASS END=131520360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:18,0 chr2 131520361 . C . PASS END=131520365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 131520366 . C . PASS END=131520374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131520375 . T . PASS END=131520375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 131520376 . T . PASS END=131520380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 131520381 . T . PASS END=131520427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr2 131520428 . A . PASS END=131520428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,513:0,34,255:16,0 chr2 131520429 . T . PASS END=131520440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,562:0,51,255:18,0 chr2 131520441 . A . PASS END=131520441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 131520442 . A . PASS END=131520454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr2 131520455 . G . PASS END=131520455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 131520456 . A . PASS END=131520456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 131520457 . G . PASS END=131520460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 131520461 . A . PASS END=131520461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 131520462 . A . PASS END=131520485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,637:0,48,255:18,0 chr2 131520486 . A . PASS END=131520486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 131520487 . G . PASS END=131520533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 131520534 . T . PASS END=131520534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 131520535 . C . PASS END=131520576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,643:0,40,255:18,0 chr2 131520577 . A . PASS END=131520577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:15,0 chr2 131520578 . C . PASS END=131520578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 131520579 . A . PASS END=131520579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 131520580 . G . PASS END=131520596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 131520597 . C . PASS END=131520597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,534:0,4,255:15,0 chr2 131520598 . G . PASS END=131520613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:17,0 chr2 131520614 . C . PASS END=131520614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 131520615 . C . PASS END=131520625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,621:0,41,255:17,0 chr2 131520626 . G . PASS END=131520630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr2 131520631 . T . PASS END=131520631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 131520632 . T . PASS END=131520645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr2 131520646 . G . PASS END=131520646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 131520647 . G . PASS END=131520655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,605:0,51,255:17,0 chr2 131520656 . G . PASS END=131520656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 131520657 . G . PASS END=131520657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 131520658 . A . PASS END=131520658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 131520659 . C . PASS END=131520662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 131520663 . T C, 95.16 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:133,48,0,620,48,620:255,51,0:0,0:9.5156e+01,4.5156e+01,1.3254e-04,4.5000e+02,7.9926e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,9:0,0,9,7 chr2 131520664 . C . PASS END=131520666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 131520667 . G . PASS END=131520667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:13,0 chr2 131520668 . G . PASS END=131520672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 131520673 . A . PASS END=131520680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,35,255:13,0 chr2 131520681 . G . PASS END=131520681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr2 131520682 . G . PASS END=131520689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:12,0 chr2 131520690 . G . PASS END=131520690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 131520691 . A . PASS END=131520700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 131520701 . C . PASS END=131520704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 131520705 . C . PASS END=131520708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr2 131520709 . G . PASS END=131520721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 131520722 . C . PASS END=131520730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:16,0 chr2 131520731 . C . PASS END=131520731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 131520732 . A . PASS END=131520764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,582:0,48,255:19,0 chr2 131520765 . A . PASS END=131520765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,693:0,35,255:20,0 chr2 131520766 . G . PASS END=131520766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 131520767 . C . PASS END=131520795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:22:0,62,848:0,62,255:25,0 chr2 131520796 . A . PASS END=131520796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 131520797 . C . PASS END=131520812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,901:0,72,255:25,0 chr2 131520813 . T . PASS END=131520813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 131520814 . C . PASS END=131520825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,903:0,75,255:26,0 chr2 131520826 . G . PASS END=131520828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 131520829 . T . PASS END=131520862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,925:0,64,255:26,0 chr2 131520863 . C . PASS END=131520863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 131520864 . A . PASS END=131520864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 131520865 . C . PASS END=131520874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 131520875 . C . PASS END=131520875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 131520876 . A . PASS END=131520888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 131520889 . A . PASS END=131520889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 131520890 . C . PASS END=131520890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 131520891 . A . PASS END=131520891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 131520892 . G . PASS END=131520895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 131520896 . C . PASS END=131520896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:27,0 chr2 131520897 . A . PASS END=131520903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,992:0,68,255:26,0 chr2 131520904 . A . PASS END=131520904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:23,0 chr2 131520905 . C . PASS END=131520918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:25,0 chr2 131520919 . T . PASS END=131520919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 131520920 . C . PASS END=131520941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 131520942 . C . PASS END=131520942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 131520943 . C . PASS END=131520945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 131520946 . T . PASS END=131520946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 131520947 . T . PASS END=131520961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:23,0 chr2 131520962 . T . PASS END=131520963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 131520964 . A . PASS END=131520977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,847:0,69,255:24,0 chr2 131520978 . T . PASS END=131520978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 131520979 . C . PASS END=131520983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr2 131520984 . A . PASS END=131520984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:21,0 chr2 131520985 . G . PASS END=131520992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 131520993 . G . PASS END=131520993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 131520994 . G . PASS END=131520996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 131520997 . C . PASS END=131520998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 131520999 . G . PASS END=131521001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 131521002 . C . PASS END=131521002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 131521003 . T . PASS END=131521004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 131521005 . G . PASS END=131521005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 131521006 . G . PASS END=131521006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 131521007 . G . PASS END=131521112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,538:0,41,255:19,0 chr2 131521113 . G . PASS END=131521114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 131521115 . C . PASS END=131521187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,598:0,40,255:18,0 chr2 131521188 . G . PASS END=131521188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 131521189 . G . PASS END=131521194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 131521195 . C . PASS END=131521201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr2 131521202 . T . PASS END=131521205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,743:0,47,255:19,0 chr2 131521206 . C . PASS END=131521208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 131521209 . C . PASS END=131521212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,768:0,52,255:19,0 chr2 131521213 . C . PASS END=131521216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 131521217 . T . PASS END=131521217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:20,0 chr2 131521218 . G . PASS END=131521218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 131521219 . G . PASS END=131521222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,751:0,50,255:19,0 chr2 131521223 . G . PASS END=131521225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131521226 . T . PASS END=131521226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,645:0,16,255:18,0 chr2 131521227 . G . PASS END=131521232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 131521233 . C . PASS END=131521233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 131521234 . C . PASS END=131521237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 131521238 . T . PASS END=131521238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 131521239 . G . PASS END=131521242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 131521243 . C . PASS END=131521243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 131521244 . C . PASS END=131521251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 131521252 . C . PASS END=131521252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 131521253 . C . PASS END=131521317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,823:0,62,255:25,0 chr2 131521318 . C . PASS END=131521318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:23,0 chr2 131521319 . A . PASS END=131521320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 131521321 . T . PASS END=131521322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,635:0,41,255:23,0 chr2 131521323 . T . PASS END=131521357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,892:0,65,255:25,0 chr2 131521358 . C . PASS END=131521358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:23,0 chr2 131521359 . C . PASS END=131521368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,937:0,62,255:24,0 chr2 131521369 . C . PASS END=131521369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 131521370 . A . PASS END=131521382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,953:0,62,255:24,0 chr2 131521383 . G . PASS END=131521383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 131521384 . G . PASS END=131521442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,805:0,66,255:24,0 chr2 131521443 . T . PASS END=131521443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 131521444 . C . PASS END=131521449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131521450 . A . PASS END=131521450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 131521451 . G . PASS END=131521452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 131521453 . A . PASS END=131521453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:22,0 chr2 131521454 . A . PASS END=131521454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 131521455 . G . PASS END=131521455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr2 131521456 . A . PASS END=131521456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr2 131521457 . G . PASS END=131521459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr2 131521460 . A . PASS END=131521460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 131521461 . C . PASS END=131521465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 131521466 . T . PASS END=131521468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,792:0,41,255:21,0 chr2 131521469 . C . PASS END=131521470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 131521471 . C . PASS END=131521471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 131521472 . T . PASS END=131521473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 131521474 . A . PASS END=131521474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 131521475 . A . PASS END=131521475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 131521476 . G . PASS END=131521476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 131521477 . G . PASS END=131521483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 131521484 . C . PASS END=131521499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:18,0 chr2 131521500 . G . PASS END=131521500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:14,0 chr2 131521501 . C . PASS END=131521507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr2 131521508 . T . PASS END=131521508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 131521509 . T . PASS END=131521510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131521511 . G . PASS END=131521511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 131521512 . A . PASS END=131521527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 131521528 . G . PASS END=131521528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 131521529 . T . PASS END=131521552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 131521553 . T . PASS END=131521553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 131521554 . A . PASS END=131521557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 131521558 . G . PASS END=131521559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,433:0,23,255:11,0 chr2 131521560 . C . PASS END=131521565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 131521566 . T . PASS END=131521566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 131521567 . C . PASS END=131521567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 131521568 . C . PASS END=131521568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 131521569 . C . PASS END=131521570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 131521571 . G . PASS END=131521571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 131521572 . A . PASS END=131521574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 131521575 . G . PASS END=131521575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:11,0 chr2 131521576 . A . PASS END=131521576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 131521577 . G . PASS END=131521578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 131521579 . C . PASS END=131521579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 131521580 . T . PASS END=131521580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 131521581 . G . PASS END=131521581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,390:0,8,255:12,0 chr2 131521582 . G . PASS END=131521583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 131521584 . C . PASS END=131521587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 131521588 . C . PASS END=131521589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 131521590 . G . LowGQ END=131521590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:10,0 chr2 131521591 . G . PASS END=131521594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,426:0,22,255:11,0 chr2 131521595 . C . PASS END=131521596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 131521597 . T . PASS END=131521598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 131521599 . G . PASS END=131521599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:11,0 chr2 131521600 . G . PASS END=131521601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 131521602 . T . PASS END=131521602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 131521603 . G . PASS END=131521654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,252:0,27,252:9,0 chr2 131521655 . G . PASS END=131521668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 131521669 . G . PASS END=131521669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 131521670 . C . PASS END=131521675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:13,0 chr2 131521676 . G . PASS END=131521686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 131521687 . C . PASS END=131521689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr2 131521690 . C . PASS END=131521694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 131521695 . A . PASS END=131521698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr2 131521699 . T . PASS END=131521699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:11,0 chr2 131521700 . C . PASS END=131521716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,474:0,39,255:13,0 chr2 131521717 . C . PASS END=131521758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,504:0,42,255:19,0 chr2 131521759 . T . PASS END=131521773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,876:0,63,255:25,0 chr2 131521774 . G . PASS END=131521774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 131521775 . G . PASS END=131521856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,886:0,72,255:26,0 chr2 131521857 . G . PASS END=131521857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:22,0 chr2 131521858 . C . PASS END=131521871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 131521872 . C . PASS END=131521873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 131521874 . G . PASS END=131521876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:21,1 chr2 131521877 . G . PASS END=131521877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 131521878 . T . PASS END=131521888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 131521889 . T . PASS END=131521892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 131521893 . C . PASS END=131521924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,582:0,45,255:19,0 chr2 131521925 . C . PASS END=131521938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 131521939 . A . PASS END=131521944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:10:0,27,405:0,30,255:9,0 chr2 131521945 . G . PASS END=131521949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 131521950 . T . PASS END=131521958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 131521959 . G . PASS END=131521974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:6:0,15,225:0,18,225:6,0 chr2 131521975 . T . PASS END=131521975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 131521976 . C . PASS END=131521977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 131521978 . G . PASS END=131522000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr2 131522001 . G . PASS END=131522022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:13,0 chr2 131522023 . C . PASS END=131522023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 131522024 . T . PASS END=131522024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 131522025 . G . PASS END=131522055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,582:0,45,255:19,0 chr2 131522056 . G . PASS END=131522056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 131522057 . T . PASS END=131522057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 131522058 . T . PASS END=131522077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:24,0 chr2 131522078 . A . PASS END=131522078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,844:0,59,255:23,0 chr2 131522079 . A . PASS END=131522090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr2 131522091 . A . PASS END=131522092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 131522093 . T . PASS END=131522094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,877:0,67,255:28,0 chr2 131522095 . T . PASS END=131522106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1025:0,87,255:32,0 chr2 131522107 . A . PASS END=131522107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 131522108 . G . PASS END=131522109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1157:0,93,255:32,0 chr2 131522110 . A . PASS END=131522110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1052:0,57,255:30,0 chr2 131522111 . A . PASS END=131522115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 131522116 . G . PASS END=131522116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:28,0 chr2 131522117 . G . PASS END=131522129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 131522130 . G . PASS END=131522130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,976:0,70,255:27,0 chr2 131522131 . C . PASS END=131522132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 131522133 . C . PASS END=131522133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr2 131522134 . C . PASS END=131522134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131522135 . A . PASS END=131522135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 131522136 . G . PASS END=131522137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131522138 . A . PASS END=131522147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:27:0,73,1011:0,73,255:26,0 chr2 131522148 . A . PASS END=131522148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,907:0,42,255:23,0 chr2 131522149 . G . PASS END=131522174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,984:0,68,255:26,0 chr2 131522175 . T . PASS END=131522176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,837:0,56,255:23,0 chr2 131522177 . T . PASS END=131522189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr2 131522190 . G . PASS END=131522190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 131522191 . T . PASS END=131522192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131522193 . G . PASS END=131522196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 131522197 . C . PASS END=131522197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131522198 . C . PASS END=131522199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 131522200 . C . PASS END=131522201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131522202 . G . PASS END=131522218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 131522219 . G . PASS END=131522221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:19:0,39,585:0,41,255:13,0 chr2 131522222 . C . PASS END=131522223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 131522224 . A . PASS END=131522230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,37,255:11,0 chr2 131522231 . G . PASS END=131522231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr2 131594527 . A . PASS END=131594544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1180:0,87,255:34,0 chr2 131594545 . T . PASS END=131594545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1180:0,72,255:32,0 chr2 131594546 . T . PASS END=131594565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1203:0,89,255:35,0 chr2 131671559 . A . PASS END=131671684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,88,255:40,0 chr2 131671685 . C . PASS END=131671685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 131671686 . T . PASS END=131671710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1164:0,85,255:32,0 chr2 131671711 . A . PASS END=131671711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr2 131671712 . G . PASS END=131671720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1217:0,86,255:32,0 chr2 131671721 . A . PASS END=131671721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1054:0,55,255:30,0 chr2 131671722 . C . PASS END=131671722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 131671723 . T . PASS END=131671723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:32,0 chr2 131671724 . G . PASS END=131671741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1180:0,83,255:33,0 chr2 131671742 . T . PASS END=131671742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 131671743 . C . PASS END=131671745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 131671746 . A . PASS END=131671746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 131671747 . C . PASS END=131671749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 131671750 . A . PASS END=131671750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:28,0 chr2 131671751 . G . PASS END=131671762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1202:0,83,255:31,0 chr2 131671763 . G . PASS END=131671763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:29,0 chr2 131671764 . G . PASS END=131671777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:32:0,89,1302:0,89,255:34,0 chr2 131671778 . G . PASS END=131671778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:31,0 chr2 131671779 . G . PASS END=131671797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1247:0,86,255:34,0 chr2 131671798 . A . PASS END=131671798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1056:0,55,255:26,0 chr2 131671799 . G . PASS END=131671804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1147:0,80,255:30,0 chr2 131671805 . C . PASS END=131671805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:30,0 chr2 131671806 . C . PASS END=131671806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 131671807 . C . PASS END=131671807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr2 131671808 . G . PASS END=131671813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 131671814 . A . PASS END=131671814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 131671815 . T . PASS END=131671817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 131671818 . A . PASS END=131671818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 131671819 . A . PASS END=131671821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1072:0,90,255:30,0 chr2 131671822 . A . PASS END=131671822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 131671823 . C . PASS END=131671825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1093:0,90,255:30,0 chr2 131671826 . T . PASS END=131671826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 131671827 . G . PASS END=131671832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 131671833 . A . PASS END=131671833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr2 131671834 . C . PASS END=131671842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 131671843 . C . PASS END=131671844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 131671845 . C . PASS END=131671845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 131671846 . A . PASS END=131671857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 131671858 . C . PASS END=131671899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1087:0,82,255:33,0 chr2 131671900 . A . PASS END=131671900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr2 131671901 . A . PASS END=131671901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1117:0,47,255:30,0 chr2 131671902 . A . PASS END=131671939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1113:0,85,255:36,0 chr2 131671940 . T . PASS END=131671940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1159:0,69,255:32,0 chr2 131671941 . C . PASS END=131671996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1127:0,85,255:37,0 chr2 131671997 . C . PASS END=131671998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:34:0,66,990:0,86,255:22,0 chr2 131671999 . C . PASS END=131672027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1221:0,91,255:36,0 chr2 131672028 . G . PASS END=131672028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:32,0 chr2 131672029 . A . PASS END=131672063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1172:0,83,255:37,0 chr2 131672064 . G . PASS END=131672100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:34,0 chr2 131672101 . T C, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,16,0:0,14,0:87:175,90,0,1155,90,1155:255,90,0:0,0:1.3729e+02,8.7289e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,18:0,0,16,14 chr2 131672102 . G . PASS END=131672106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 131672107 . A . PASS END=131672108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,87,255:25,0 chr2 131672109 . T . PASS END=131672117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 131672118 . T . PASS END=131672118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 131672119 . G . PASS END=131672119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 131672120 . G . PASS END=131672138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 131672139 . G . PASS END=131672140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 131672141 . C . PASS END=131672149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,61,255:19,0 chr2 131672150 . G . PASS END=131672163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr2 131672164 . A . PASS END=131672164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 131672165 . T . PASS END=131672166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131672167 . C . PASS END=131672167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 131672168 . A . PASS END=131672174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr2 131672175 . A . PASS END=131672177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:21,0 chr2 131672178 . G . PASS END=131672187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,748:0,66,255:22,0 chr2 131672188 . C . PASS END=131672189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr2 131672190 . T . PASS END=131672194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:21,0 chr2 131672195 . G . PASS END=131672208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:18:0,48,720:0,50,255:17,0 chr2 131672209 . C . PASS END=131672209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 131672210 . C . PASS END=131672224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr2 131672225 . G . PASS END=131672227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 131672228 . C . PASS END=131672233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 131672234 . C . PASS END=131672240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 131672241 . G . PASS END=131672241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:20,0 chr2 131672242 . G . PASS END=131672246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:21,0 chr2 131672247 . A . PASS END=131672248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,737:0,47,255:19,0 chr2 131672249 . A . PASS END=131672264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,878:0,72,255:24,0 chr2 131672265 . G . PASS END=131672265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 131672266 . G . PASS END=131672270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 131672271 . T C, 116.22 PASS DP=24;MQ=250.00;FractionInformativeReads=0.958 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,9,0:0,14,0:66:154,69,0,884,69,884:255,72,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,8:0,0,13,10 chr2 131672272 . G . PASS END=131672292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr2 131672293 . A . PASS END=131672293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 131672294 . C . PASS END=131672298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,947:0,64,255:25,0 chr2 131672299 . C . PASS END=131672307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 131672308 . C . PASS END=131672308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 131672309 . C . PASS END=131672328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 131672329 . G . PASS END=131672338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 131672339 . A . PASS END=131672342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 131672343 . T . PASS END=131672345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 131672346 . G . PASS END=131672349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131672350 . T . PASS END=131672372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr2 131672373 . G . PASS END=131672374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131672375 . T . PASS END=131672378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1047:0,74,255:26,0 chr2 131672379 . A . PASS END=131672386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 131672387 . T . PASS END=131672388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 131672389 . G . PASS END=131672389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:24,0 chr2 131672390 . G . PASS END=131672439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,886:0,64,255:26,0 chr2 131672440 . C . PASS END=131672440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 131672441 . C . PASS END=131672454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr2 131672455 . C . PASS END=131672455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:21,0 chr2 131672456 . C . PASS END=131672482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,752:0,63,255:23,0 chr2 131672483 . G . PASS END=131672483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 131672484 . C . PASS END=131672499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:24,0 chr2 131672500 . C . PASS END=131672500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr2 131672501 . T . PASS END=131672502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 131672503 . T . PASS END=131672505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 131672506 . G . PASS END=131672523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr2 131672524 . C . PASS END=131672524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131672525 . A . PASS END=131672532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 131672533 . T . PASS END=131672537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 131672538 . T . PASS END=131672538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 131672539 . A . PASS END=131672540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 131672541 . C . PASS END=131672541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 131672542 . A . PASS END=131672549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1056:0,87,255:29,0 chr2 131672550 . C . PASS END=131672550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 131672551 . A . PASS END=131672555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 131672556 . A . PASS END=131672558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 131672559 . G . PASS END=131672565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 131672566 . G . PASS END=131672566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 131672567 . G . PASS END=131672577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 131672578 . A . PASS END=131672578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 131672579 . C . PASS END=131672581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 131672582 . A . PASS END=131672584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,1002:0,70,255:28,0 chr2 131672585 . G . PASS END=131672590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 131672591 . A . PASS END=131672591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 131672592 . A . PASS END=131672661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1083:0,83,255:35,0 chr2 131672662 . T . PASS END=131672666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,86,255:26,0 chr2 131672667 . C . PASS END=131672668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 131672669 . A . PASS END=131672669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:26,0 chr2 131672670 . C . PASS END=131672677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1185:0,80,255:30,0 chr2 131672678 . T . PASS END=131672678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr2 131672679 . C . PASS END=131672684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1117:0,90,255:30,0 chr2 131672685 . C . PASS END=131672685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 131672686 . G . PASS END=131672689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 131672690 . C . PASS END=131672690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 131672691 . C . PASS END=131672703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1066:0,90,255:31,0 chr2 131672704 . T . PASS END=131672704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 131672705 . G . PASS END=131672705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 131672706 . G . PASS END=131672706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 131672707 . G . PASS END=131672732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1170:0,89,255:33,0 chr2 131672733 . A . PASS END=131672734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr2 131672735 . C . PASS END=131672761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1050:0,90,255:30,0 chr2 131672762 . T . PASS END=131672766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 131672767 . G . PASS END=131672912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1131:0,80,255:40,1 chr2 131672913 . G . PASS END=131672949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:37:0,85,1335:0,85,255:39,0 chr2 131672950 . A G, 161.37 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,16,0:0,22,0:111:199,114,0,1469,114,1469:255,114,0:0,0:1.6137e+02,1.1137e+02,0.0000e+00,4.5000e+02,1.4614e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,16:0,0,24,14 chr2 131672951 . C . PASS END=131672987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1205:0,91,255:37,0 chr2 131672988 . A . PASS END=131673055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:35:0,95,1281:0,95,255:37,0 chr2 131673056 . A . PASS END=131673056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 131673057 . G . PASS END=131673095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1186:0,86,255:34,0 chr2 131673096 . G . PASS END=131673099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 131673100 . G . PASS END=131673106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:31,0 chr2 131673107 . A . PASS END=131673107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:30,0 chr2 131673108 . G . PASS END=131673145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1127:0,82,255:33,0 chr2 131673146 . T . PASS END=131673146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:27,0 chr2 131673147 . G . PASS END=131673190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:33:0,83,1216:0,83,255:35,0 chr2 131673191 . A . PASS END=131673191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:31,0 chr2 131673192 . A . PASS END=131673273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:30:0,80,1125:0,80,255:35,0 chr2 131673274 . T . PASS END=131673274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:26,0 chr2 131673275 . C . PASS END=131673278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131673279 . C . PASS END=131673280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131673281 . G . PASS END=131673296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:26,0 chr2 131673297 . C . PASS END=131673297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 131673298 . G . PASS END=131673305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 131673306 . A . PASS END=131673306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 131673307 . C . PASS END=131673315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 131673316 . C T, 115.77 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,12,0:0,11,0:66:154,69,0,863,69,863:255,69,0:0,0:1.1577e+02,6.5767e+01,1.0354e-06,4.5000e+02,1.0054e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,16:0,0,10,13 chr2 131673317 . G . PASS END=131673353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,68,255:25,0 chr2 131673354 . G . PASS END=131673394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,878:0,75,255:26,0 chr2 131673395 . A . PASS END=131673395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 131673396 . G . PASS END=131673404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 131673405 . G . PASS END=131673405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr2 131673406 . C . PASS END=131673406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 131673407 . G . PASS END=131673410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 131673411 . T . PASS END=131673411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:21,0 chr2 131673412 . C . PASS END=131673422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 131673423 . C . PASS END=131673437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,798:0,50,255:19,0 chr2 131673438 . G . PASS END=131673438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131673439 . T . PASS END=131673439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr2 131673440 . C . PASS END=131673470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,798:0,63,255:24,0 chr2 131673471 . T . PASS END=131673486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:21:0,50,790:0,50,255:19,0 chr2 131673487 . C . PASS END=131673514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:22,0 chr2 131673515 . T . PASS END=131673601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,659:0,41,255:19,0 chr2 131673602 . C . PASS END=131673605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 131673606 . T . PASS END=131673606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,791:0,55,255:20,0 chr2 131673607 . A . PASS END=131673609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:22,0 chr2 131673610 . G . PASS END=131673610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 131673611 . G . PASS END=131673611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 131673612 . G . PASS END=131673650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:23,0 chr2 131673651 . C . PASS END=131673654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,828:0,53,255:19,0 chr2 131673655 . G . PASS END=131673671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 131673672 . T . PASS END=131673672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 131673673 . C . PASS END=131673685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr2 131673686 . T . PASS END=131673686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 131673687 . C . PASS END=131673698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,765:0,72,255:24,0 chr2 131673699 . C . PASS END=131673699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr2 131673700 . G . PASS END=131673707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,892:0,72,255:24,0 chr2 131673708 . A . PASS END=131673708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 131673709 . G . PASS END=131673717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 131673718 . G . PASS END=131673729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,714:0,46,255:19,0 chr2 131673730 . G . PASS END=131673732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131673733 . T . PASS END=131673776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr2 131673777 . A . PASS END=131673777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 131673778 . G . PASS END=131673798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:16,0 chr2 131673799 . A . PASS END=131673827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 131673828 . C . PASS END=131673833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,521:0,42,255:15,0 chr2 131673834 . T . PASS END=131673834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr2 131673835 . G . PASS END=131673842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131673843 . C . PASS END=131673847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 131673848 . C . PASS END=131673848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 131673849 . C . PASS END=131673856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 131673857 . G . PASS END=131673861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131673862 . C . PASS END=131673868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131673869 . G . PASS END=131673871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131673872 . G . PASS END=131673872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 131673873 . C . PASS END=131673880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 131673881 . C . PASS END=131673907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 131673908 . G . PASS END=131673935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 131673936 . T . PASS END=131673936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 131673937 . G . PASS END=131673940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131673941 . A . PASS END=131673941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 131673942 . C . PASS END=131673942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 131673943 . T . PASS END=131673953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 131673954 . G . PASS END=131673966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 131673967 . C . PASS END=131673973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 131673974 . A . PASS END=131673974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 131673975 . C . PASS END=131673976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 131673977 . G . PASS END=131673977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 131673978 . A . PASS END=131673979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 131673980 . G . PASS END=131673980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr2 131673981 . G . PASS END=131673987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 131673988 . C . PASS END=131673988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:9,0 chr2 131673989 . T . PASS END=131673995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,413:0,36,255:12,0 chr2 131673996 . C . PASS END=131674009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:17,0 chr2 131674010 . G . PASS END=131674010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 131674011 . G . PASS END=131674052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,592:0,40,255:19,0 chr2 131674053 . C . PASS END=131674054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 131674055 . C . PASS END=131674055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 131674056 . C . PASS END=131674059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:20,0 chr2 131674060 . T . PASS END=131674063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 131674064 . C . PASS END=131674064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:17,0 chr2 131674065 . A . PASS END=131674067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 131674068 . A . PASS END=131674084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 131674085 . T . PASS END=131674085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:19,0 chr2 131674086 . G . PASS END=131674087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 131674088 . C . PASS END=131674093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 131674094 . T . PASS END=131674100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 131674101 . C . PASS END=131674104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 131674105 . G . PASS END=131674107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 131674108 . T . PASS END=131674108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 131674109 . G . PASS END=131674154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,61,255:26,0 chr2 131674155 . C . PASS END=131674158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131674159 . A . PASS END=131674172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 131674173 . G . PASS END=131674173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 131674174 . C . PASS END=131674174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 131674175 . C . PASS END=131674178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 131674179 . G . PASS END=131674179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 131674180 . G . PASS END=131674196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:30:0,81,1192:0,90,255:34,0 chr2 131674197 . G . PASS END=131674197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1224:0,58,255:31,0 chr2 131674198 . C . PASS END=131674247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1191:0,89,255:37,0 chr2 131674248 . C . PASS END=131674269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1236:0,91,255:36,0 chr2 131674270 . A . PASS END=131674270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:30,0 chr2 131674271 . A . PASS END=131674284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,882:0,84,255:33,0 chr2 131674285 . A G, 154.41 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,18,0:0,18,0:104:192,107,0,292,292,292:255,108,0:0,0:1.5441e+02,1.0441e+02,0.0000e+00,2.8918e+02,3.2395e+02,2.9219e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,22:0,0,18,18 chr2 131674286 . A . PASS END=131674287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:33,0 chr2 131674288 . A . PASS END=131674288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1071:0,69,255:31,0 chr2 131674289 . G . PASS END=131674297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1225:0,101,255:38,0 chr2 131674298 . A . PASS END=131674298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1191:0,69,255:36,0 chr2 131674299 . A . PASS END=131674322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:39:0,87,1246:0,87,255:40,0 chr2 131674323 . C . PASS END=131674387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1133:0,80,255:39,0 chr2 131674388 . A . PASS END=131674388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 131674389 . A . PASS END=131674416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:31:0,80,1060:0,80,255:32,0 chr2 131674417 . G . PASS END=131674417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:30,0 chr2 131674418 . C . PASS END=131674426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:31,0 chr2 131674427 . G . PASS END=131674427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:28,0 chr2 131674428 . T . PASS END=131674430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1148:0,85,255:30,0 chr2 131674431 . G . PASS END=131674431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:29,0 chr2 131674432 . T . PASS END=131674438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:30,0 chr2 131674439 . C . PASS END=131674439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr2 131674440 . T . PASS END=131674440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:30,0 chr2 131674441 . A . PASS END=131674441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:30,0 chr2 131674442 . G . PASS END=131674447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1164:0,83,255:31,0 chr2 131674448 . G . PASS END=131674448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 131674449 . A . PASS END=131674449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 131674450 . A . PASS END=131674450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1062:0,54,255:28,0 chr2 131674451 . G . PASS END=131674452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 131674453 . T . PASS END=131674453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:26,0 chr2 131674454 . C . PASS END=131674454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 131674455 . T . PASS END=131674457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,890:0,76,255:26,0 chr2 131674458 . C . PASS END=131674458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 131674459 . C . PASS END=131674533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,817:0,61,255:26,0 chr2 131674534 . A . PASS END=131674580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,720:0,47,255:19,0 chr2 131674581 . A . PASS END=131674581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr2 131674582 . A . PASS END=131674627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,548:0,40,255:19,0 chr2 131674628 . G . PASS END=131674628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 131674629 . A . PASS END=131674647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr2 131674648 . T . PASS END=131674648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 131674649 . T . PASS END=131674683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:15,0 chr2 131674684 . C . PASS END=131674684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 131674685 . C . PASS END=131674690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 131674691 . A . PASS END=131674694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:13,0 chr2 131674695 . C . PASS END=131674764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:19,0 chr2 131674765 . C . PASS END=131674773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 131674774 . G . PASS END=131674810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,651:0,51,255:19,0 chr2 131674811 . A . PASS END=131674811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr2 131674812 . G . PASS END=131674832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:18,0 chr2 131674833 . G . PASS END=131674833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131674834 . T . PASS END=131674836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 131674837 . C . PASS END=131674839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 131674840 . C . PASS END=131674841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,823:0,55,255:21,0 chr2 131674842 . A . PASS END=131674843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 131674844 . C . PASS END=131674844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:20,0 chr2 131674845 . C . PASS END=131674870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,892:0,61,255:26,0 chr2 131674871 . G . PASS END=131674872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131674873 . T . PASS END=131674876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:26,0 chr2 131674877 . C . PASS END=131674886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 131674887 . A . PASS END=131674887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 131674888 . C . PASS END=131674892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 131674893 . A . PASS END=131674893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 131674894 . C . PASS END=131674896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131674897 . G . PASS END=131674897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:26,0 chr2 131674898 . G . PASS END=131674900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 131674901 . A . PASS END=131674901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr2 131674902 . G . PASS END=131674904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 131674905 . G . PASS END=131674905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr2 131674906 . T . PASS END=131674911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 131674912 . G . PASS END=131674924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,978:0,67,255:26,0 chr2 131674925 . C . PASS END=131674927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 131674928 . A . PASS END=131674929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,878:0,42,255:26,0 chr2 131674930 . G . PASS END=131674930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 131674931 . A . PASS END=131674933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 131674934 . C . PASS END=131674935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131674936 . C . PASS END=131674936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr2 131674937 . A . PASS END=131674942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 131674943 . C . PASS END=131674944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 131674945 . G . PASS END=131674945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131674946 . A . PASS END=131674948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 131674949 . A . PASS END=131674952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 131674953 . T . PASS END=131674953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 131674954 . C . PASS END=131674960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 131674961 . T . PASS END=131674961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,891:0,64,255:26,0 chr2 131674962 . C . PASS END=131674967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 131674968 . A . PASS END=131674968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 131674969 . G . PASS END=131674970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 131674971 . C . PASS END=131674986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 131674987 . G . PASS END=131674987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:24,0 chr2 131674988 . C . PASS END=131675015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,68,255:26,0 chr2 131675016 . A . PASS END=131675038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr2 131675039 . G . PASS END=131675041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 131675042 . C . PASS END=131675043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 131675044 . C . PASS END=131675071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:13,0 chr2 131688525 . A . PASS END=131688635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:32:0,81,1189:0,86,255:40,0 chr2 131688636 . A . PASS END=131688643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,74,255:24,0 chr2 131688644 . C . PASS END=131688646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:28:0,49,810:0,49,255:22,0 chr2 131688647 . C . PASS END=131688691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr2 131688692 . G . PASS END=131688695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 131688696 . A . PASS END=131688696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 131688697 . G . PASS END=131688744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:30,0 chr2 131688745 . A . PASS END=131688745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 131688746 . G . PASS END=131688746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 131688747 . A . PASS END=131688747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:28,0 chr2 131688748 . A . PASS END=131688749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 131688750 . A . PASS END=131688750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr2 131688751 . C . PASS END=131688751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 131688752 . A . PASS END=131688752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 131688753 . C . PASS END=131688753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 131688754 . A . PASS END=131688754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 131688755 . G . PASS END=131688759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1186:0,93,255:31,0 chr2 131688760 . A . PASS END=131688760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 131688761 . G . PASS END=131688783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr2 131688784 . T . PASS END=131688794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 131688795 . C . PASS END=131688795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 131688796 . T . PASS END=131688802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,71,255:23,0 chr2 131688803 . A . PASS END=131688803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:23,0 chr2 131688804 . G . PASS END=131688808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,1024:0,60,255:24,0 chr2 131688809 . A . PASS END=131688810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 131688811 . T . PASS END=131688815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,906:0,62,255:23,0 chr2 131688816 . A . PASS END=131688816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr2 131688817 . A . PASS END=131688817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:23,0 chr2 131688818 . A . PASS END=131688818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:23,0 chr2 131688819 . G . PASS END=131688820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:23,0 chr2 131688821 . T . PASS END=131688826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 131688827 . C . PASS END=131688830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 131704082 . T . PASS END=131704100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,80,255:26,0 chr2 131704101 . T . PASS END=131704108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:29,0 chr2 131704109 . C . PASS END=131704109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 131704110 . C . PASS END=131704200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1197:0,87,255:36,0 chr2 131704201 . A . PASS END=131704208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:27:0,63,945:0,68,255:25,0 chr2 131721466 . A . LowDepth;LowGQ END=131721487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 131721488 . C . LowDepth END=131721517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 131721518 . G C, 5.46 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=197.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4593e+00,4.4706e+00,4.4609e+00,4.0229e+01,3.9241e+01,4.3229e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,1,0 chr2 131721519 . G . LowDepth;LowGQ END=131721555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:3,0 chr2 131721556 . C . PASS END=131721560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 131721561 . C . PASS END=131721577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 131721578 . G . PASS END=131721581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 131721582 . T . PASS END=131721601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:13,0 chr2 131721602 . G . PASS END=131721614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 131721615 . T . PASS END=131721615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 131721616 . G . PASS END=131721642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,515:0,45,255:19,0 chr2 131721643 . A . PASS END=131721650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 131721651 . G . PASS END=131721651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:21,0 chr2 131721652 . G . PASS END=131721657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr2 131721658 . C . PASS END=131721658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 131721659 . G . PASS END=131721659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 131721660 . A . PASS END=131721660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 131721661 . G . PASS END=131721661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 131721662 . T . PASS END=131721662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 131721663 . G . PASS END=131721676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,899:0,75,255:26,0 chr2 131721677 . T . PASS END=131721677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr2 131721678 . A . PASS END=131721691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:26,0 chr2 131721692 . C . PASS END=131721692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131721693 . G . PASS END=131721693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr2 131721694 . C . PASS END=131721694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 131721695 . C . PASS END=131721695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131721696 . G . PASS END=131721696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 131721697 . G . PASS END=131721698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131721699 . C . PASS END=131721700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:23,0 chr2 131721701 . G . PASS END=131721701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:22,0 chr2 131721702 . T . PASS END=131721702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:22,0 chr2 131721703 . C . PASS END=131721703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:22,0 chr2 131721704 . C . PASS END=131721711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1014:0,68,255:24,0 chr2 131721712 . C . PASS END=131721712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 131721713 . C . PASS END=131721714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 131721715 . A . PASS END=131721715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 131721716 . C . PASS END=131721716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr2 131721717 . T . PASS END=131721717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 131721718 . C . PASS END=131721719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:21,0 chr2 131721720 . G . PASS END=131721771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,847:0,62,255:24,0 chr2 131721772 . G . PASS END=131721784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr2 131721785 . C . PASS END=131721789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 131721790 . G . PASS END=131721818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,675:0,41,255:19,0 chr2 131721819 . G . PASS END=131721822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 131722063 . C . PASS END=131722068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,933:0,67,255:26,0 chr2 131722069 . C . PASS END=131722070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr2 131722071 . T . PASS END=131722071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 131722072 . T . PASS END=131722073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 131722074 . T . PASS END=131722088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,925:0,67,255:27,0 chr2 131722089 . G . PASS END=131722089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr2 131722090 . A . PASS END=131722117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,817:0,61,255:25,0 chr2 131722118 . A . PASS END=131722118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,776:0,33,255:20,0 chr2 131722119 . G . PASS END=131722119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 131769268 . A . PASS END=131769270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1243:0,102,255:34,0 chr2 131769271 . A . PASS END=131769271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:33,0 chr2 131769272 . G . PASS END=131769274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1205:0,88,255:35,0 chr2 131769275 . C . PASS END=131769279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1250:0,105,255:35,0 chr2 131769280 . G . PASS END=131769280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:33,0 chr2 131769281 . G . PASS END=131769335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:92:34:0,92,1288:0,92,255:40,0 chr2 131769336 . T . PASS END=131769336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1374:0,71,255:38,0 chr2 131769337 . C . PASS END=131769406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:32:0,81,1260:0,81,255:40,0 chr2 131769407 . A . PASS END=131769407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,981:0,79,255:27,0 chr2 131769408 . C . PASS END=131769420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 131769421 . C . PASS END=131769421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 131769422 . T . PASS END=131769422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131769423 . T . PASS END=131769423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 131769424 . G . PASS END=131769424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 131769425 . T . PASS END=131769425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 131769426 . G . PASS END=131769426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 131769427 . T . PASS END=131769427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,885:0,54,255:25,0 chr2 131769428 . C . PASS END=131769429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131769430 . C . PASS END=131769458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,806:0,63,255:26,0 chr2 131769459 . C . PASS END=131769475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:19,0 chr2 131769476 . C . PASS END=131769481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:19:0,30,450:0,41,255:10,0 chr2 131785518 . C . PASS END=131785535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,997:0,87,255:34,0 chr2 131785536 . T . PASS END=131785536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1129:0,69,255:32,0 chr2 131785537 . G . PASS END=131785652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:32:0,90,1219:0,95,255:40,0 chr2 131785653 . A . PASS END=131785653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:29,0 chr2 131785654 . T . PASS END=131785654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 131785655 . G . PASS END=131785657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 131792665 . A . LowDepth END=131792705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:3,0 chr2 131792706 . C . PASS END=131792712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 131792713 . G . PASS END=131792731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 131792732 . G . PASS END=131792739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 131792740 . C . PASS END=131792741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 131792742 . G . PASS END=131792790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 131792791 . G . PASS END=131792791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,418:0,8,255:12,0 chr2 131792792 . T . PASS END=131792797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 131792798 . T . PASS END=131792835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 131796426 . C . PASS END=131796429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 131796430 . T . PASS END=131796430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 131796431 . C . PASS END=131796432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 131796433 . G . PASS END=131796433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,0 chr2 131796434 . C . PASS END=131796436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 131796437 . T . PASS END=131796437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 131796438 . G . PASS END=131796447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,780:0,69,255:24,0 chr2 131796448 . T . PASS END=131796448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr2 131796449 . C . PASS END=131796450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 131796451 . G . PASS END=131796523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,980:0,81,255:34,0 chr2 131796524 . A . PASS END=131796525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 131796526 . T . PASS END=131796534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 131796535 . C . PASS END=131796550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,899:0,64,255:26,0 chr2 131796551 . G . PASS END=131796560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:21:0,51,765:0,62,255:19,0 chr2 131796561 . C . PASS END=131796564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131796565 . T . PASS END=131796590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,582:0,44,255:19,0 chr2 131796591 . G . PASS END=131796600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,527:0,31,255:13,0 chr2 131796601 . T . PASS END=131796601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 131796602 . T . PASS END=131796605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:11,0 chr2 131796945 . C . PASS END=131796965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,109,1770:0,109,255:40,0 chr2 131797589 . C . PASS END=131797590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 131797591 . G . PASS END=131797607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:25,0 chr2 131797608 . A . PASS END=131797608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 131797609 . G . PASS END=131797618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,917:0,62,255:26,0 chr2 131797619 . G . PASS END=131797619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 131797620 . A . PASS END=131797630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 131797631 . C . PASS END=131797714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,948:0,81,255:35,0 chr2 131797715 . A . PASS END=131797716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 131797717 . C . PASS END=131797720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,105,255:28,0 chr2 131797721 . A . PASS END=131797765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,884:0,61,255:26,0 chr2 131797834 . G . PASS END=131797837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 131797838 . A . PASS END=131797862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 131797863 . A . PASS END=131797863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:28,0 chr2 131797864 . G . PASS END=131797931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:34,0 chr2 131797932 . G . PASS END=131797954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,826:0,67,255:26,0 chr2 131797955 . A . PASS END=131797955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,823:0,44,255:21,0 chr2 131797956 . G . PASS END=131797970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 131797971 . G . PASS END=131797977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,72,255:19,0 chr2 131797978 . C . PASS END=131797988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:30:15:0,30,450:0,45,255:13,0 chr2 131797989 . G . PASS END=131797989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:10,0 chr2 131797990 . C . PASS END=131798004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 131798005 . C . PASS END=131798013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr2 131798803 . C . PASS END=131798843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,418:0,33,255:13,0 chr2 131798844 . C . PASS END=131798863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:15,0 chr2 131798864 . T . PASS END=131798864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131798865 . C . PASS END=131798872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 131798873 . T . PASS END=131798873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131798874 . C . PASS END=131798875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 131798876 . C . PASS END=131798885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 131798886 . C . PASS END=131798890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 131798891 . A . PASS END=131798892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 131798893 . G . PASS END=131798913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 131798914 . C . PASS END=131798920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131798921 . T . PASS END=131799032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:19,0 chr2 131799033 . C . PASS END=131799035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 131799388 . G . PASS END=131799498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:28:0,80,1033:0,80,255:40,0 chr2 131799499 . C . PASS END=131799510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:27:0,63,945:0,80,255:26,0 chr2 131799511 . C . PASS END=131799517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:48:23:0,48,720:0,62,255:18,0 chr2 131801025 . G . PASS END=131801156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:29:0,87,1103:0,87,255:40,0 chr2 131801872 . G . PASS END=131801894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:19,0 chr2 131801895 . G . PASS END=131801937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:26,0 chr2 131801938 . G . PASS END=131801943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131801944 . G . PASS END=131801944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 131801945 . A . PASS END=131801948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 131801949 . C . PASS END=131801952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 131801953 . A . PASS END=131801953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 131801954 . A . PASS END=131801963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,948:0,73,255:26,0 chr2 131801964 . C . PASS END=131801983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr2 131801984 . A . PASS END=131801988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 131801989 . T . PASS END=131801989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 131801990 . T . PASS END=131801997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 131801998 . C . PASS END=131801998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr2 131801999 . A . PASS END=131802029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,67,255:26,0 chr2 131802030 . G . PASS END=131802052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 131802053 . A . PASS END=131802063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 131802064 . C . PASS END=131802077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr2 131802078 . C . PASS END=131802088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 131802089 . A . PASS END=131802089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 131802090 . G . PASS END=131802115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr2 131802942 . G . PASS END=131802942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131802943 . C . PASS END=131802943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 131802944 . T . PASS END=131802956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr2 131802957 . A . PASS END=131802957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 131802958 . A . PASS END=131802973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,535:0,45,255:19,0 chr2 131802974 . G . PASS END=131802986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 131802987 . C . PASS END=131803001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 131803002 . T . PASS END=131803002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 131803003 . C . PASS END=131803004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:20:0,44,698:0,44,255:19,0 chr2 131803005 . C . PASS END=131803008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 131803009 . G . PASS END=131803010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,720:0,44,255:19,0 chr2 131803011 . A . PASS END=131803017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 131803018 . A . PASS END=131803018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,668:0,46,255:20,0 chr2 131803019 . G . PASS END=131803032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 131803033 . A . PASS END=131803033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 131803034 . G . PASS END=131803036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 131803037 . C . PASS END=131803076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,668:0,44,255:19,0 chr2 131803077 . T . PASS END=131803077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 131803078 . T . PASS END=131803107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:17,0 chr2 131803108 . C . PASS END=131803108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131803109 . T . PASS END=131803109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 131803110 . A . PASS END=131803111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131803381 . G . PASS END=131803382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131803383 . C . PASS END=131803383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 131803384 . A . PASS END=131803384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131803385 . C . PASS END=131803386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 131803387 . C . PASS END=131803394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 131803395 . C . PASS END=131803395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 131803396 . A . PASS END=131803396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 131803397 . G . PASS END=131803397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 131803398 . G . PASS END=131803405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr2 131803406 . A . PASS END=131803406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 131803407 . G . PASS END=131803413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 131803414 . A . PASS END=131803414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 131803415 . G . PASS END=131803420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr2 131803421 . G . PASS END=131803421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 131803422 . G . PASS END=131803424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 131803425 . A . PASS END=131803425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 131803426 . G . PASS END=131803435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 131803436 . G . PASS END=131803436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 131803437 . C . PASS END=131803437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 131803438 . A . PASS END=131803438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 131803439 . G . PASS END=131803439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 131803440 . C . PASS END=131803440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 131803441 . C . PASS END=131803447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 131803448 . C . PASS END=131803448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 131803449 . T . PASS END=131803459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr2 131803460 . C . PASS END=131803460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 131803461 . A . PASS END=131803465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 131803466 . T . PASS END=131803466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 131803467 . C . PASS END=131803473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 131803474 . C . PASS END=131803482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 131803483 . T . PASS END=131803483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 131803484 . G . PASS END=131803484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 131803485 . T . PASS END=131803493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 131803494 . T . PASS END=131803497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 131803498 . T . PASS END=131803514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 131803611 . C . PASS END=131803633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,894:0,62,255:26,0 chr2 131803634 . A . PASS END=131803634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 131803635 . C . PASS END=131803668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,800:0,62,255:26,0 chr2 131803669 . G . PASS END=131803669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 131803670 . C . PASS END=131803670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 131803671 . C . PASS END=131803682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:19,0 chr2 131803683 . T . PASS END=131803683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:17,0 chr2 131803684 . C . PASS END=131803722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 131803723 . C . PASS END=131803726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 131803727 . C . PASS END=131803743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 131803744 . G . PASS END=131803745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 131803746 . C . PASS END=131803746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 131803747 . A . PASS END=131803757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,504:0,39,255:13,0 chr2 131803758 . A . PASS END=131803758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 131803759 . G . PASS END=131803759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 131803760 . T . PASS END=131803760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 131803761 . G . PASS END=131803762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 131810476 . T . PASS END=131810481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 131810482 . C . PASS END=131810486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 131810487 . G . PASS END=131810487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 131810488 . G . PASS END=131810497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr2 131810498 . C . PASS END=131810516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 131810517 . G . PASS END=131810517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 131810518 . G . PASS END=131810520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 131810521 . C . PASS END=131810537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 131810538 . T . PASS END=131810538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr2 131810539 . G . PASS END=131810585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:11,0 chr2 131810586 . T . PASS END=131810586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 131810587 . A . PASS END=131810588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 131812845 . C . PASS END=131812847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:25,0 chr2 131812848 . C . PASS END=131812851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,817:0,36,255:25,0 chr2 131812852 . C . PASS END=131812854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,931:0,78,255:26,0 chr2 131812855 . G . PASS END=131812860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 131812861 . G . PASS END=131812861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 131812862 . G . PASS END=131812994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:28:0,80,1005:0,80,255:40,0 chr2 131812995 . A . PASS END=131812995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1259:0,77,255:29,0 chr2 131812996 . C . PASS END=131813001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:29,0 chr2 131813002 . C . PASS END=131813014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,68,255:25,0 chr2 131813015 . G . PASS END=131813015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 131813016 . T . PASS END=131813018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 131813019 . C . PASS END=131813022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 131813126 . C . PASS END=131813144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:12,0 chr2 131813145 . T . PASS END=131813145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 131813146 . G . PASS END=131813153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 131813154 . G . PASS END=131813154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 131813155 . C . PASS END=131813178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,421:0,36,255:13,0 chr2 131813179 . T . PASS END=131813179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 131813180 . C . PASS END=131813199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:11,0 chr2 131813200 . A . PASS END=131813223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr2 131813224 . T . PASS END=131813224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 131813225 . G . PASS END=131813247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,311:0,27,255:9,0 chr2 131813248 . A . PASS END=131813248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 131813249 . A . PASS END=131813268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,294:0,24,255:8,0 chr2 131829428 . C . PASS END=131829511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:40:0,114,1710:0,120,255:40,0 chr2 131840150 . C . PASS END=131840219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:36:0,102,1530:0,108,255:40,0 chr2 131878515 . A . PASS END=131878551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1178:0,100,255:40,0 chr2 131883326 . G . PASS END=131883330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:40:0,103,1227:0,103,255:40,0 chr2 131883331 . A . PASS END=131883331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:46:45:0,46,1253:0,46,255:40,0 chr2 131883332 . T . PASS END=131883354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,103,1441:0,103,255:40,0 chr2 131883355 . T . PASS END=131883478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:83:33:0,83,1224:0,83,255:40,0 chr2 131884257 . A . PASS END=131884261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1288:0,94,255:37,0 chr2 131884262 . C . PASS END=131884262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1257:0,64,255:35,0 chr2 131884263 . A . PASS END=131884282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1299:0,97,255:39,0 chr2 131884283 . A . PASS END=131884283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1343:0,65,255:37,0 chr2 131884284 . A . PASS END=131884327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:38:0,87,1305:0,87,255:40,0 chr2 131884328 . A . PASS END=131884328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:32,0 chr2 131884329 . G . PASS END=131884341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1016:0,85,255:32,0 chr2 131884342 . A . PASS END=131884359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:25:0,66,990:0,75,255:26,0 chr2 131888294 . G . PASS END=131888316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,150,255:40,0 chr2 131888317 . A . PASS END=131888333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,200,255:40,0 chr2 131890475 . G . PASS END=131890585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1305:0,94,255:40,0 chr2 131890586 . C . PASS END=131890588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 131897740 . C . PASS END=131897742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 131897743 . G . PASS END=131897820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1215:0,87,255:40,0 chr2 131897821 . G . PASS END=131897823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:28:0,78,1170:0,84,255:26,0 chr2 131897824 . G . PASS END=131897824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr2 131897825 . T . PASS END=131897836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,953:0,62,255:25,0 chr2 131897837 . A . PASS END=131897837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 131897838 . C . PASS END=131897839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr2 131897840 . C . PASS END=131897848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,56,255:19,0 chr2 131901981 . A . PASS END=131902022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,99,1579:0,99,255:40,0 chr2 131904210 . G . PASS END=131904212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr2 131904213 . T . PASS END=131904215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr2 131904216 . A . PASS END=131904237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,933:0,62,255:26,0 chr2 131904238 . A . PASS END=131904242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 131904243 . T . PASS END=131904243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 131904244 . C . PASS END=131904249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 131904250 . A . PASS END=131904275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,939:0,65,255:26,0 chr2 131904276 . A . PASS END=131904282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1119:0,90,255:30,0 chr2 131904283 . A . PASS END=131904314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:25,0 chr2 131904315 . T . PASS END=131904334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:18:0,45,628:0,54,255:18,0 chr2 131904335 . T . PASS END=131904346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:11,0 chr2 131975976 . A . PASS END=131975976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:27,0 chr2 131975977 . T . PASS END=131976234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:88:33:0,88,1142:0,88,255:40,0 chr2 131976235 . A . PASS END=131976271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:61:0,117,1800:0,117,255:40,0 chr2 131976272 . G C, 223.95 PASS DP=64;MQ=26.17;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,31,0:0,33,0:190:262,193,0,2473,193,2473:255,193,0:0,0:2.2395e+02,1.8962e+02,0.0000e+00,4.5000e+02,2.2439e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,32:0,0,33,31 chr2 131976273 . A . PASS END=131976309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,147,255:40,0 chr2 131976310 . G . PASS END=131976496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:64:0,103,1800:0,103,255:40,0 chr2 131981169 . G . PASS END=131981313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,102,1692:0,102,255:40,0 chr2 131981443 . G . PASS END=131981463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1215:0,93,255:30,0 chr2 131981464 . G . PASS END=131981482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,931:0,68,255:25,0 chr2 131981483 . T . PASS END=131981483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 131981484 . G . PASS END=131981529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,814:0,63,255:25,0 chr2 131981530 . A . PASS END=131981530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr2 131981531 . C . PASS END=131981531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 131981532 . T . PASS END=131981535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 131981536 . C . PASS END=131981536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 131981537 . A . PASS END=131981539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,59,255:19,0 chr2 131981540 . A . PASS END=131981542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:20,0 chr2 131981543 . C . PASS END=131981580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,579:0,41,255:19,0 chr2 131981581 . C . PASS END=131981616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr2 131984396 . C . PASS END=131984494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:80:0,120,1800:0,241,255:40,0 chr2 131984495 . T . PASS END=131984502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:78:0,120,1800:0,235,255:40,0 chr2 131985817 . G . PASS END=131985954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:84:43:0,84,1260:0,113,255:40,0 chr2 131988409 . A . PASS END=131988479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,102,1530:0,105,255:40,0 chr2 131994305 . A . PASS END=131994311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 131994312 . G C, 21.03 PASS DP=3;MQ=9.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,3,0:0,0,0:7:58,9,0,116,9,116:116,9,0:0,0:2.1031e+01,7.0312e+00,1.0021e+00,1.1431e+02,4.1801e+01,1.1731e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,1:0,0,2,1 chr2 131994313 . T . LowGQ END=131994349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:3:0,0,90:0,0,94:3,0 chr2 131994350 . A . PASS END=131994375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,86:0,9,86:3,0 chr2 131995767 . A . PASS END=131995811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:45:0,82,1575:0,82,255:40,0 chr2 131996848 . A . LowDepth;LowGQ END=131997017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 132002980 . A . PASS END=132002997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:2,0 chr2 132002998 . T . PASS END=132003050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr2 132008351 . A . LowDepth;LowGQ END=132008421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 132010099 . A . LowDepth END=132010143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:2,0 chr2 132010491 . C . PASS END=132010503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,163,255:40,0 chr2 132010504 . T . PASS END=132010540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,173,255:40,0 chr2 132010541 . T . LowGQ END=132010541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,11:75:0:75:0,0,1978:201,0,255:40,0 chr2 132010542 . G . PASS END=132010578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,184,255:40,0 chr2 132010579 . C . PASS END=132010651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,87,255:40,0 chr2 132010652 . T . PASS END=132010662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,70,255:26,0 chr2 132010663 . A . PASS END=132010672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:24:0,45,675:0,68,255:19,0 chr2 132019299 . T . PASS END=132019357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:3,0 chr2 132019358 . A . LowGQ END=132019419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,16:0,0,46:3,0 chr2 132020928 . C . PASS END=132020945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1447:0,104,255:40,0 chr2 132020946 . A . PASS END=132020946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1212:0,76,255:38,0 chr2 132020947 . A . PASS END=132021163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:31:0,81,1215:0,93,255:40,1 chr2 132021164 . C . PASS END=132021173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:24,0 chr2 132021174 . A . PASS END=132021264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 132021265 . G . PASS END=132021272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:21,0 chr2 132021273 . C . PASS END=132021273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 132021274 . A . PASS END=132021304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,817:0,64,255:26,0 chr2 132021305 . G . PASS END=132021311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr2 132021312 . A . PASS END=132021312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 132021313 . G . PASS END=132021628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:31:0,83,1079:0,83,255:40,0 chr2 132021629 . G . PASS END=132021629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:7:54:0,7,1745:0,7,255:40,0 chr2 132021630 . G . PASS END=132021908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:84:38:0,84,1260:0,97,255:40,0 chr2 132021909 . C . PASS END=132021914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,98,255:30,0 chr2 132021915 . C . PASS END=132021917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 132021918 . C . PASS END=132021919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,98,255:27,0 chr2 132021920 . T . PASS END=132021920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 132021921 . T . PASS END=132021922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 132021923 . C . PASS END=132021925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 132021926 . C . PASS END=132021928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 132021929 . G . PASS END=132021929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:26,0 chr2 132021930 . G . PASS END=132021932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 132021933 . A . PASS END=132021944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 132021945 . G . PASS END=132021945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:22,0 chr2 132021946 . G A, 7.17 DRAGENSnpHardQUAL DP=29;MQ=21.97;MQRankSum=0.888;ReadPosRankSum=0.511;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,6,0:0.207,0.000:29:12,1,0:11,5,0:7:41,0,34,207,771,977:137,0,255:19,0:7.1690e+00,9.2621e-01,3.8260e+01,2.0746e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,21,2,4:11,12,3,3 chr2 132021947 . C . PASS END=132021947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:21,0 chr2 132021948 . A . PASS END=132021948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 132021949 . T . PASS END=132021954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 132021955 . A . PASS END=132021957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 132021958 . C . PASS END=132022011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:25,0 chr2 132022012 . C . PASS END=132022030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:16:0,45,582:0,48,255:16,0 chr2 132022031 . C T, 12.45 PASS DP=16;MQ=15.95;MQRankSum=2.606;ReadPosRankSum=2.152;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,5,0:0.312,0.000:16:3,1,0:8,4,0:12:47,0,27,150,393,543:124,0,255:11,0:1.2450e+01,2.5869e-01,3.0259e+01,1.5027e+02,4.2849e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,10,0,5:7,4,4,1 chr2 132022032 . G . PASS END=132022033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 132022034 . C . PASS END=132022068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,31,255:13,0 chr2 132022069 . A . PASS END=132022091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,404:0,33,255:13,0 chr2 132022092 . C . PASS END=132022092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 132022093 . C . PASS END=132022099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 132022100 . G . LowGQ END=132022100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr2 132022101 . A . PASS END=132022129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:12,0 chr2 132022130 . G . PASS END=132022132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 132022133 . C . PASS END=132022140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr2 132022141 . C . PASS END=132022143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 132022144 . T . PASS END=132022144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 132022145 . G . PASS END=132022149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 132022150 . T . PASS END=132022150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 132022151 . C . PASS END=132022166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 132022167 . G . PASS END=132022167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 132022168 . C . PASS END=132022168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 132022169 . C . PASS END=132022169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 132022170 . T . PASS END=132022173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 132022174 . T . PASS END=132022174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 132022175 . G . PASS END=132022202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 132022203 . A . PASS END=132022203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:9,0 chr2 132022204 . A . PASS END=132022211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 132022212 . T . PASS END=132022219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 132022220 . G . PASS END=132022220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr2 132022221 . T . PASS END=132022226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 132022227 . C . PASS END=132022249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,180:0,18,180:6,0 chr2 132022250 . C . PASS END=132022250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 132022251 . T . PASS END=132022254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 132022255 . A . PASS END=132022255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 132022256 . G . PASS END=132022256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 132110593 . G . PASS END=132110595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 132110596 . C . PASS END=132110637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:19,0 chr2 132110638 . A . PASS END=132110656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr2 132110657 . C . PASS END=132110657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr2 132110658 . A . PASS END=132110658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 132110659 . A . PASS END=132110659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,356:0,19,255:9,0 chr2 132110660 . C . PASS END=132110663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 132110664 . A . PASS END=132110664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 132110665 . T . PASS END=132110689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 132110690 . T . PASS END=132110690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 132110691 . A . PASS END=132110693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 132110694 . A . PASS END=132110695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 132110696 . G . PASS END=132110698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 132110699 . C . PASS END=132110712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:7:0,21,271:0,21,255:9,0 chr2 132110713 . G . PASS END=132110752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 132110753 . T . PASS END=132110790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr2 132110791 . A . LowDepth END=132110827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 132110828 . G T, 5.48 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=14.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,1,0:0,0,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4794e+00,4.4626e+00,4.4529e+00,4.0249e+01,3.9233e+01,4.3249e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,0,1:0,0,0,1 chr2 132110829 . G . LowGQ END=132110865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:1:0,0,8:0,0,31:2,0 chr2 132110866 . C . PASS END=132110888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:2:0,3,45:0,6,70:3,0 chr2 132110889 . G . PASS END=132110904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,149:0,12,149:6,0 chr2 132110905 . C . PASS END=132110943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:9,0 chr2 132110944 . G . PASS END=132110972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:13,0 chr2 132110973 . T . PASS END=132110976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 132110977 . C . PASS END=132110990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,504:0,39,255:13,0 chr2 132110991 . G . PASS END=132110991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 132110992 . T . PASS END=132110992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 132110993 . C . PASS END=132110993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 132110994 . A . PASS END=132110994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 132110995 . A . PASS END=132110995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 132110996 . A . PASS END=132110997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 132110998 . C . PASS END=132111004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 132111005 . C . PASS END=132111016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 132111017 . C . PASS END=132111017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr2 132111018 . C . PASS END=132111018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 132111019 . C . PASS END=132111020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 132111021 . T . PASS END=132111021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 132111022 . C . PASS END=132111027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 132111028 . G . PASS END=132111028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 132111029 . G . PASS END=132111029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 132111030 . A . PASS END=132111031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 132111032 . C . PASS END=132111040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 132111041 . T . PASS END=132111071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,227:0,21,227:9,0 chr2 132111072 . T . PASS END=132111072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 132111073 . C . PASS END=132111075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 132111076 . G . PASS END=132111088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 132111089 . C . PASS END=132111099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,235:6,0 chr2 132120529 . T . PASS END=132120529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 132120530 . C . PASS END=132120530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 132120531 . A . PASS END=132120532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1017:0,74,255:29,0 chr2 132120533 . C . PASS END=132120544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1117:0,93,255:31,0 chr2 132120545 . G . PASS END=132120545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 132120546 . G . PASS END=132120550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 132120551 . A . PASS END=132120551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:29,0 chr2 132120552 . A . PASS END=132120556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 132120557 . G . PASS END=132120557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr2 132120558 . A . PASS END=132120558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:29,0 chr2 132120559 . A . PASS END=132120559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr2 132120560 . T . PASS END=132120570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1073:0,80,255:32,0 chr2 132120571 . T . PASS END=132120571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:31,0 chr2 132120572 . A . PASS END=132120582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1105:0,83,255:33,0 chr2 132120583 . G . PASS END=132120583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,959:0,65,255:31,0 chr2 132120584 . A . PASS END=132120587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:33,0 chr2 132120588 . G . PASS END=132120588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:33:33:0,33,945:0,33,255:26,0 chr2 132120589 . G . PASS END=132120598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1036:0,82,255:29,0 chr2 132120599 . A . PASS END=132120599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 132120600 . T . PASS END=132120601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 132120602 . T . PASS END=132120602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 132120603 . T . PASS END=132120610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:30,0 chr2 132120611 . C . PASS END=132120611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr2 132120612 . A . PASS END=132120620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 132120621 . A . PASS END=132120622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 132120623 . G . PASS END=132120625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 132120626 . T . PASS END=132120626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 132120627 . A . PASS END=132120627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 132120628 . A . PASS END=132120639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr2 132120640 . A . PASS END=132120648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:52:23:0,52,723:0,52,255:19,0 chr2 132120649 . T . PASS END=132120657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 132120658 . C . PASS END=132120667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 132120668 . T . PASS END=132120672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 132120673 . G . PASS END=132120679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:23:0,55,792:0,55,255:19,0 chr2 132120680 . C . PASS END=132120724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,850:0,63,255:26,0 chr2 132120725 . T . PASS END=132120876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:28:0,81,1103:0,84,255:40,0 chr2 132120877 . C . PASS END=132120913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:67:0,120,1800:0,171,255:40,0 chr2 132120914 . T C, 26.91 PASS DP=71;MQ=42.25;MQRankSum=-5.844;ReadPosRankSum=4.610;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,28,0:0.400,0.000:70:19,11,0:23,17,0:27:62,0,43,965,1435,2400:255,0,255:39,0:2.6909e+01,8.9601e-03,4.6259e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,20,12,16:21,21,21,7 chr2 132120915 . T . PASS END=132120951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:67:0,120,1800:0,154,255:40,0 chr2 132120952 . T . PASS END=132121058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:34:0,81,1215:0,87,255:40,0 chr2 132121059 . T . PASS END=132121071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:24,0 chr2 132121072 . A . PASS END=132121078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 132121079 . T . PASS END=132121079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,751:0,22,255:16,0 chr2 132121080 . G . PASS END=132121097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,529:0,41,255:18,0 chr2 132121098 . G . PASS END=132121098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 132121099 . C . PASS END=132121123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,629:0,51,255:18,0 chr2 132121124 . A . PASS END=132121181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 132121182 . A . PASS END=132121194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 132121195 . G . PASS END=132121195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 132121196 . A . PASS END=132121199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 132121200 . T . PASS END=132121214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 132121215 . T . PASS END=132121228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr2 132121229 . T . PASS END=132121229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 132121230 . G . PASS END=132121231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 132121232 . T . PASS END=132121232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 132121233 . C . PASS END=132121233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 132121234 . C . PASS END=132121241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:8,0 chr2 132121242 . A . PASS END=132121242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:6,0 chr2 132121243 . C . PASS END=132121250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:7,0 chr2 132121251 . T . PASS END=132121251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 132121252 . G . PASS END=132121269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 132121270 . C . PASS END=132121289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:5:0,15,172:0,15,172:6,0 chr2 132121290 . A . LowGQ END=132121290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:2,0,118:4,0 chr2 132121291 . C . PASS END=132121293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 132227889 . T . PASS END=132227916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:63:0,120,1800:0,155,255:40,0 chr2 132229641 . C . PASS END=132229755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:97:38:0,97,1343:0,97,255:40,0 chr2 132233773 . A . PASS END=132233775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:37,0 chr2 132235737 . C . PASS END=132235741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr2 132235742 . G . PASS END=132235749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1000:0,78,255:26,0 chr2 132235750 . C . PASS END=132235750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 132235751 . T . PASS END=132235751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 132235752 . A . PASS END=132235939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:31:0,84,1260:0,90,255:40,1 chr2 132235940 . C . PASS END=132235959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,945:0,70,255:25,0 chr2 132236881 . A . PASS END=132236881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:27,0 chr2 132236882 . T . PASS END=132236883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 132236884 . A . PASS END=132236884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr2 132236885 . A . PASS END=132236993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:30:0,86,1141:0,86,255:40,0 chr2 132236994 . A . PASS END=132236995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:63:34:0,63,1150:0,63,255:31,0 chr2 132236996 . T . PASS END=132237003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:32,0 chr2 132237004 . T . PASS END=132237007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 132237008 . C . PASS END=132237012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 132237013 . A . PASS END=132237013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:27,0 chr2 132237014 . C . PASS END=132237023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:28,0 chr2 132237024 . A . PASS END=132237028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1037:0,71,255:25,0 chr2 132237029 . G . PASS END=132237029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,901:0,54,255:23,0 chr2 132237642 . G . PASS END=132237889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:52:0,118,1800:0,118,255:40,0 chr2 132237890 . C . PASS END=132237926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,215,255:40,0 chr2 132237927 . C . LowGQ END=132237927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,7:72:0:72:0,0,2210:55,0,255:40,0 chr2 132237928 . G . PASS END=132237982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,138,255:40,0 chr2 132237983 . A G, 22.00 PASS DP=59;MQ=56.99;MQRankSum=-3.811;ReadPosRankSum=2.856;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,16,0:0.271,0.000:59:18,9,0:25,7,0:22:57,0,45,543,1477,2020:255,0,255:40,0:2.2003e+01,2.7530e-02,4.8378e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,21,8,8:21,22,9,7 chr2 132237984 . G . PASS END=132238020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,128,255:40,0 chr2 132238021 . T . PASS END=132238292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:55:0,120,1800:0,148,255:40,0 chr2 132238293 . T . PASS END=132238293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:70:52:0,70,955:0,70,255:40,0 chr2 132238294 . T . PASS END=132238322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,105,1620:0,105,255:40,0 chr2 132240125 . G . PASS END=132240125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 132240126 . T . PASS END=132240127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 132240128 . G . PASS END=132240128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 132240129 . G . PASS END=132240129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 132240130 . C . PASS END=132240131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 132240132 . T . PASS END=132240132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 132240133 . T . PASS END=132240133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 132240134 . A . PASS END=132240135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:21,0 chr2 132240136 . C . PASS END=132240137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr2 132240138 . A . PASS END=132240138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 132240139 . C . PASS END=132240143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,992:0,75,255:26,0 chr2 132240144 . C . PASS END=132240145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 132240146 . C . PASS END=132240149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 132240150 . C . PASS END=132240186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1149:0,84,255:33,0 chr2 132240187 . G . PASS END=132240187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr2 132240188 . G . PASS END=132240198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1271:0,99,255:34,0 chr2 132240199 . G . PASS END=132240199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:32,0 chr2 132240200 . C . PASS END=132240421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:35:0,99,1466:0,104,255:40,0 chr2 132241634 . C . PASS END=132241787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:85:34:0,85,1134:0,85,255:40,0 chr2 132241788 . C . PASS END=132241791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,1170:0,63,255:26,0 chr2 132243675 . T . PASS END=132243719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,116,1459:0,116,255:40,0 chr2 132243720 . G . PASS END=132243748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:39:0,93,1395:0,116,255:40,0 chr2 132243749 . C . PASS END=132243754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:35:0,69,1035:0,105,255:25,0 chr2 132248197 . T . PASS END=132248213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,907:0,65,255:26,0 chr2 132248214 . T . PASS END=132248214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 132248215 . C . PASS END=132248222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:30,0 chr2 132248223 . C . PASS END=132248223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 132248224 . A . PASS END=132248341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:32:0,83,1164:0,83,255:40,0 chr2 132248342 . G . PASS END=132248378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,109,1714:0,109,255:40,0 chr2 132248379 . T G, 45.95 PASS DP=54;MQ=106.98;MQRankSum=-5.300;ReadPosRankSum=2.764;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,31,0:0.574,0.000:54:13,16,0:10,15,0:44:81,0,46,1099,815,1914:255,0,255:18,0:4.5950e+01,1.6360e-04,4.9102e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,16,15:8,15,13,18 chr2 132248380 . A . PASS END=132248416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,121,255:40,0 chr2 132248417 . G . PASS END=132248431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:41:0,96,1440:0,116,255:40,0 chr2 132248432 . G . PASS END=132248442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,92,255:31,0 chr2 132248443 . C . PASS END=132248443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 132248444 . C . PASS END=132248445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 132248446 . G . PASS END=132248456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,71,255:25,0 chr2 132248457 . A . PASS END=132248462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:42:31:0,42,630:0,93,255:15,0 chr2 132248463 . C . PASS END=132248465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:36:30:0,36,540:0,90,255:13,0 chr2 132249449 . C . PASS END=132249453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:12,0 chr2 132249454 . G . PASS END=132249454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr2 132249455 . T . PASS END=132249469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:13,0 chr2 132249470 . A . PASS END=132249470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 132249471 . C . PASS END=132249478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 132249479 . G . PASS END=132249479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,411:0,25,255:12,0 chr2 132249480 . A . PASS END=132249480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 132249481 . G . PASS END=132249482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr2 132249483 . C . PASS END=132249484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 132249485 . C . PASS END=132249485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 132249486 . G . PASS END=132249486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 132249487 . G . PASS END=132249491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 132249492 . A . PASS END=132249494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 132249495 . G . PASS END=132249535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:15:0,40,507:0,40,255:16,0 chr2 132249536 . A . PASS END=132249536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr2 132249537 . C . PASS END=132249538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr2 132249539 . T . PASS END=132249540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 132249541 . A . PASS END=132249547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 132249548 . G . PASS END=132249548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr2 132249549 . G . PASS END=132249555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,527:0,45,255:15,0 chr2 132249556 . G . PASS END=132249556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 132249557 . C . PASS END=132249558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 132249559 . A . PASS END=132249559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 132249560 . G . PASS END=132249565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,492:0,45,255:15,0 chr2 132249566 . C . PASS END=132249566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 132249567 . C . PASS END=132249570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 132249571 . T . PASS END=132249571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:11,0 chr2 132249572 . T . PASS END=132249577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 132249578 . T . PASS END=132249578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 132249579 . C . PASS END=132249580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 132249581 . G . PASS END=132249581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 132249582 . C . PASS END=132249591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:13,0 chr2 132249592 . A . PASS END=132249592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 132249593 . G . PASS END=132249596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr2 132249597 . C . PASS END=132249597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:12,0 chr2 132249780 . T . PASS END=132249802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 132249803 . G . PASS END=132249803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 132249804 . C . PASS END=132249831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,631:0,54,255:19,0 chr2 132249832 . G . PASS END=132249834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 132249835 . C . PASS END=132249835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 132249836 . C . PASS END=132249842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,699:0,60,255:20,0 chr2 132249843 . T . PASS END=132249857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:17:0,41,659:0,41,255:18,0 chr2 132249858 . T . PASS END=132249858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 132249859 . T . PASS END=132249878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr2 132249879 . T . PASS END=132249879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 132249880 . T . PASS END=132249888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,607:0,54,255:18,0 chr2 132249889 . C . PASS END=132249889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr2 132249890 . C . PASS END=132249896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 132249897 . A . PASS END=132249897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 132249898 . G . PASS END=132249910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 132249911 . C . PASS END=132249924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 132249925 . C . PASS END=132249926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:21:13:0,21,315:0,29,255:11,0 chr2 132249927 . G . PASS END=132249970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:4:0,12,155:0,12,149:6,0 chr2 132249971 . G . PASS END=132249977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr2 132249978 . G . PASS END=132249988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:4,0 chr2 132249989 . C . PASS END=132249990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 132249991 . C . PASS END=132249997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,225:5,0 chr2 132249998 . G . PASS END=132250003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,194:3,0 chr2 132250004 . G . PASS END=132250007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr2 132250008 . A . PASS END=132250024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:4:6:0,4,90:0,4,216:3,0 chr2 132250025 . G . PASS END=132250066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:3:4:0,3,45:0,12,155:2,0 chr2 132250067 . G GGGAGCGGCA, 48.10 PASS DP=5;MQ=163.71;MQRankSum=-1.231;ReadPosRankSum=-0.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,3,0:0.600,0.000:5:0,2,0:2,1,0:47:77,0,49,126,84,210:79,0,63:2,6:4.8100e+01,9.5003e-05,5.1963e+01,1.3174e+02,1.1924e+02,2.1921e+02:0.00,29.00,32.00,34.77,63.77,37.77:1,1,1,2:1,1,0,3 chr2 132250068 . G . LowGQ END=132250068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,3:5:0:5:0,0,0:101,0,62:5,0 chr2 132250069 . G . PASS END=132250092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:5,0 chr2 132250093 . T G, 48.10 PASS DP=5;MQ=163.71;MQRankSum=-1.231;ReadPosRankSum=0.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,3,0:0.600,0.000:5:0,2,0:2,1,0:47:83,0,49,107,72,179:101,0,62:2,0:4.8100e+01,9.5003e-05,5.1963e+01,1.0724e+02,1.0629e+02,1.8175e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,1,1,2:1,1,0,3 chr2 132250094 . C . PASS END=132250098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 132250099 . T . LowGQ END=132250099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr2 132250100 . C . PASS END=132250102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 132285544 . A . PASS END=132285550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 132285551 . G . PASS END=132285553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 132285554 . C . PASS END=132285554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 132285555 . G . PASS END=132285559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,465:0,36,255:13,0 chr2 132285560 . T . PASS END=132285560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 132285561 . G . PASS END=132285565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 132285566 . C . PASS END=132285566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 132285567 . T . PASS END=132285568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 132285569 . G . PASS END=132285569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 132285570 . G . PASS END=132285571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 132285572 . C . PASS END=132285572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr2 132285573 . G . PASS END=132285573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 132285574 . C . PASS END=132285574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 132285575 . G . PASS END=132285578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 132285579 . C . PASS END=132285582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 132285583 . A . LowGQ END=132285583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:13,0,255:12,0 chr2 132285584 . G . PASS END=132285586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 132285587 . C . PASS END=132285587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 132285588 . G . PASS END=132285593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr2 132285594 . C . PASS END=132285594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 132285595 . C . PASS END=132285595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr2 132285596 . C . PASS END=132285596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,418:0,12,255:13,0 chr2 132285597 . G . PASS END=132285600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,545:0,45,255:16,0 chr2 132285601 . T . PASS END=132285601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,482:0,31,255:15,0 chr2 132285602 . C . PASS END=132285602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,562:0,51,255:17,0 chr2 132285603 . T . PASS END=132285604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 132285605 . G . PASS END=132285605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr2 132285606 . G . PASS END=132285606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 132285607 . C . PASS END=132285608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,597:0,51,255:17,0 chr2 132285609 . C . PASS END=132285609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:16,0 chr2 132285610 . C . PASS END=132285610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 132285611 . G . PASS END=132285613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,548:0,51,255:17,0 chr2 132285614 . G . LowGQ END=132285614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,377:15,0,255:13,0 chr2 132285615 . C . PASS END=132285618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:18,0 chr2 132285619 . C . PASS END=132285620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 132285621 . C . PASS END=132285625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,721:0,47,255:19,0 chr2 132285626 . C . PASS END=132285648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,703:0,60,255:24,0 chr2 132285649 . C . PASS END=132285649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 132285650 . C . PASS END=132285653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 132285654 . G . PASS END=132285654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 132285655 . A . PASS END=132285659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:25,0 chr2 132285660 . G . PASS END=132285660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 132285661 . C . PASS END=132285668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,895:0,62,255:26,0 chr2 132285669 . G . PASS END=132285669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 132285670 . C . PASS END=132285671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 132285672 . G . PASS END=132285674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 132285675 . C . PASS END=132285675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 132285676 . G . PASS END=132285680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 132285681 . G . PASS END=132285708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr2 132285709 . A . PASS END=132285709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 132285710 . G . PASS END=132285751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr2 132285752 . A . PASS END=132285753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 132285754 . C . PASS END=132285758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 132285759 . T . PASS END=132285762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr2 132285763 . G . PASS END=132285763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 132285764 . A . PASS END=132285771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 132285772 . C . PASS END=132285780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 132285781 . C . PASS END=132285806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:18,0 chr2 132285807 . G . PASS END=132285830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr2 132285831 . C . PASS END=132285831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 132285832 . C . PASS END=132285836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 132285837 . A . PASS END=132285837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 132285838 . C . PASS END=132285838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr2 132285839 . A . PASS END=132285839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 132285840 . C . PASS END=132285840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 132285841 . T . PASS END=132285842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 132285843 . A . PASS END=132285844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:9,0 chr2 132285845 . C . PASS END=132285845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:9,0 chr2 132285846 . A . PASS END=132285848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 132285849 . G . LowGQ END=132285849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:11:0,0,222:17,0,239:7,0 chr2 132285850 . C . PASS END=132285853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 132285854 . T . PASS END=132285854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr2 132285855 . C . PASS END=132285855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 132285856 . C . PASS END=132285856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr2 132285857 . C . PASS END=132285860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,280:0,24,255:8,0 chr2 132285861 . G . PASS END=132285861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 132285862 . C . PASS END=132285863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 132285864 . C . PASS END=132285864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 132285865 . A . PASS END=132285867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:9,0 chr2 132285868 . A . PASS END=132285868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 132285869 . A . PASS END=132285872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 132285873 . A . PASS END=132285873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 132285874 . G . PASS END=132285880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 132285881 . A . PASS END=132285882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,217:0,10,217:7,0 chr2 132285883 . T . PASS END=132285884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 132285885 . C . PASS END=132285885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 132285886 . A . PASS END=132285886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 132285887 . G . LowGQ END=132285887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:7,0 chr2 132285888 . C . PASS END=132285888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr2 132285889 . A . PASS END=132285889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 132285890 . C . PASS END=132285890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 132285891 . A . PASS END=132285893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,250:7,0 chr2 132285894 . C . PASS END=132285894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 132285895 . C . PASS END=132285895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:5,0 chr2 132285896 . T . PASS END=132285896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 132285897 . G . PASS END=132285897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr2 132285898 . G . PASS END=132285900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 132285901 . T . LowGQ END=132285901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,164:18,0,181:4,0 chr2 132285902 . C . PASS END=132285906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:5,0 chr2 132285907 . G . PASS END=132285907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr2 132285908 . G . PASS END=132285917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr2 132285918 . C . PASS END=132285919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,225:0,21,225:7,0 chr2 132286066 . G . PASS END=132286092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,607:0,40,255:19,0 chr2 132286093 . T . PASS END=132286093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:15,0 chr2 132286094 . A . PASS END=132286097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 132286985 . A . PASS END=132286985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 132286986 . T . PASS END=132286986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:13,0 chr2 132286987 . G . PASS END=132286991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr2 132286992 . A . PASS END=132286992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:15,0 chr2 132286993 . G . PASS END=132286994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 132286995 . C . PASS END=132286995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 132286996 . C . PASS END=132287010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:19,0 chr2 132287011 . G . PASS END=132287014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr2 132287015 . T . PASS END=132287015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 132287016 . G . PASS END=132287016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 132287017 . C . PASS END=132287017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 132287018 . C . PASS END=132287032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 132287033 . G . PASS END=132287054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 132287055 . A . PASS END=132287059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 132287060 . G . PASS END=132287060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr2 132287061 . A . PASS END=132287061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 132287062 . A . PASS END=132287066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 132287067 . T . PASS END=132287069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 132287070 . T . PASS END=132287070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 132287071 . G . PASS END=132287074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 132287075 . A . PASS END=132287075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,909:0,35,255:27,0 chr2 132287076 . G . PASS END=132287076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 132287077 . C . PASS END=132287085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 132287086 . T . PASS END=132287086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:24,0 chr2 132287087 . G . PASS END=132287093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 132287094 . G . PASS END=132287100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr2 132287101 . T . PASS END=132287101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:27,0 chr2 132287102 . C . PASS END=132287108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1216:0,83,255:29,0 chr2 132287109 . T . PASS END=132287110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:31:0,44,1025:0,44,255:30,1 chr2 132287111 . G . PASS END=132287122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:33,0 chr2 132287123 . T . PASS END=132287123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:32,0 chr2 132287124 . T . PASS END=132287264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:36:0,91,1168:0,91,255:40,0 chr2 132287551 . A . PASS END=132287648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1062:0,83,255:34,0 chr2 132287649 . T . PASS END=132287669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:28:0,68,1008:0,68,255:26,0 chr2 132287670 . G . PASS END=132287670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 132287671 . G . PASS END=132287700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,861:0,69,255:25,0 chr2 132287701 . C . PASS END=132287701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 132287702 . T . PASS END=132287731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,893:0,72,255:26,0 chr2 132287732 . C . PASS END=132287734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 132287735 . A . PASS END=132287743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 132287744 . G . PASS END=132287786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1133:0,84,255:36,0 chr2 132287787 . T . PASS END=132287823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:38:0,96,1412:0,96,255:40,0 chr2 132287824 . C T, 46.35 PASS DP=45;MQ=92.28;MQRankSum=-3.826;ReadPosRankSum=1.192;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,23,0:0.511,0.000:45:10,12,0:12,11,0:45:81,0,48,762,749,1511:255,0,255:21,0:4.6350e+01,1.3720e-04,5.0757e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,16,13,10:12,10,14,9 chr2 132287825 . T . PASS END=132287861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1404:0,87,255:40,0 chr2 132287862 . G . PASS END=132287900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1363:0,84,255:38,0 chr2 132287901 . C . PASS END=132287901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:30,0 chr2 132287902 . C . PASS END=132287928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:31,0 chr2 132287929 . G . PASS END=132287933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr2 132287934 . T . PASS END=132287934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:25,0 chr2 132287935 . A . PASS END=132287943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,886:0,64,255:27,0 chr2 132287944 . C . PASS END=132287946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 132287947 . T . PASS END=132287947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 132287948 . C . PASS END=132287948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 132287949 . C . PASS END=132287950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr2 132287951 . A . PASS END=132287951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:25,0 chr2 132287952 . G . PASS END=132287955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 132287956 . G . PASS END=132287965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:28,0 chr2 132287966 . A . PASS END=132287966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 132287967 . G . PASS END=132287968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 132287969 . G . PASS END=132287969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 132287970 . G . PASS END=132287971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 132287972 . T . PASS END=132287975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1100:0,74,255:26,0 chr2 132287976 . G . PASS END=132287980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 132287981 . G . PASS END=132287981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:29,0 chr2 132287982 . G . PASS END=132288002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:33,0 chr2 132288003 . C . PASS END=132288003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1148:0,68,255:31,0 chr2 132288004 . A . PASS END=132288016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr2 132288017 . T . PASS END=132288017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 132288018 . G . PASS END=132288035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:31:0,82,1097:0,82,255:31,0 chr2 132288036 . C . PASS END=132288036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:29,0 chr2 132288037 . C . PASS END=132288038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 132288039 . A . PASS END=132288039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 132288040 . A . PASS END=132288064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:33,0 chr2 132288065 . C . PASS END=132288081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr2 132288082 . A . PASS END=132288082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 132288083 . C . PASS END=132288101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1180:0,83,255:32,0 chr2 132288102 . T C, 0.11 DRAGENSnpHardQUAL DP=32;MQ=36.29;MQRankSum=-0.266;ReadPosRankSum=2.631;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:26,6,0:0.188,0.000:32:11,3,0:15,3,0:16:19,0,43,215,922,1136:136,0,255:26,0:1.0738e-01,1.6122e+01,6.1997e+01,2.3068e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,0,6:13,13,3,3 chr2 132288103 . T . PASS END=132288111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 132288112 . A . PASS END=132288113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 132288114 . C . PASS END=132288116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 132288117 . C . PASS END=132288121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 132288122 . C . PASS END=132288122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:24,0 chr2 132288123 . C . PASS END=132288135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,992:0,65,255:26,0 chr2 132288136 . C . PASS END=132288139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 132288140 . C . PASS END=132288141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 132288142 . T . PASS END=132288142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1004:0,59,255:28,0 chr2 132288143 . G . PASS END=132288143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 132288144 . C . PASS END=132288144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 132288145 . T . PASS END=132288156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:29,0 chr2 132288157 . C . PASS END=132288157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 132288158 . C . PASS END=132288168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:27,0 chr2 132288169 . C . PASS END=132288212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr2 132288213 . C . PASS END=132288213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr2 132288214 . A . PASS END=132288219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,934:0,84,255:28,0 chr2 132288220 . G . PASS END=132288257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr2 132288258 . G . PASS END=132288266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 132288267 . G . PASS END=132288289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,984:0,65,255:26,0 chr2 132288290 . C . PASS END=132288313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr2 132288314 . C . PASS END=132288314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 132288315 . G . PASS END=132288326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,864:0,75,255:25,0 chr2 132288327 . C G, 3.81 DRAGENSnpHardQUAL DP=25;MQ=40.84;MQRankSum=-1.223;ReadPosRankSum=3.076;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,4,0:0.160,0.000:25:10,2,0:11,2,0:4:36,0,42,143,743,886:80,0,255:21,0:3.8144e+00,2.3322e+00,4.7582e+01,1.4536e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,13,2,2:13,8,2,2 chr2 132288328 . G . PASS END=132288338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,64,255:26,0 chr2 132288339 . C . PASS END=132288361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,50,255:19,0 chr2 132288362 . T C, 25.04 PASS DP=20;MQ=44.75;MQRankSum=-3.328;ReadPosRankSum=1.030;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,7,0:0.350,0.000:20:6,3,0:7,4,0:25:60,0,42,250,456,706:211,0,255:11,0:2.5045e+01,1.3744e-02,4.5264e+01,2.5007e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,4,3:6,7,2,5 chr2 132288363 . G . PASS END=132288369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 132288370 . T . PASS END=132288370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 132288371 . T . PASS END=132288382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,621:0,51,255:17,0 chr2 132288383 . A . PASS END=132288383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 132288384 . G . PASS END=132288390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr2 132288391 . T . PASS END=132288391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr2 132288392 . C . PASS END=132288395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 132288396 . T . PASS END=132288399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 132288400 . G . PASS END=132288400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 132289225 . C . PASS END=132289238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:88:35:0,88,1112:0,88,255:40,0 chr2 132289239 . A . PASS END=132289239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:38,0 chr2 132289240 . A . PASS END=132289255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:42:0,119,1615:0,119,255:40,0 chr2 132289256 . C . PASS END=132289292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,103,1647:0,103,255:40,0 chr2 132289293 . T . LowGQ END=132289293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,11:56:0:56:0,0,1324:192,0,255:40,0 chr2 132289294 . C . PASS END=132289330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,121,255:40,0 chr2 132289331 . C . PASS END=132289375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:45:0,105,1575:0,114,255:40,0 chr2 132290162 . A . PASS END=132290163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 132290164 . A . PASS END=132290164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 132290165 . G . PASS END=132290209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,801:0,66,255:25,0 chr2 132290210 . C . PASS END=132290210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 132290211 . A . PASS END=132290225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr2 132290226 . A . PASS END=132290226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 132290227 . G . PASS END=132290237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:21,0 chr2 132290238 . G . PASS END=132290244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 132290245 . C . PASS END=132290248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 132290249 . C . PASS END=132290265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 132290266 . C . PASS END=132290275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 132290276 . G . PASS END=132290276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 132290277 . C . PASS END=132290280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 132290281 . A . PASS END=132290284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 132290285 . C . PASS END=132290289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 132290290 . C . PASS END=132290305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,853:0,63,255:22,0 chr2 132290306 . A . PASS END=132290314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr2 132290315 . C . PASS END=132290315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 132290316 . C . PASS END=132290317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 132290318 . C T, 34.34 PASS DP=20;MQ=38.06;MQRankSum=-0.038;ReadPosRankSum=3.062;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,10,0:0.500,0.000:20:7,5,0:3,5,0:34:69,0,39,358,358,716:255,0,255:9,0:3.4335e+01,1.8546e-03,4.2335e+01,3.5791e+02,3.9238e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,5,5:4,6,8,2 chr2 132290319 . G . PASS END=132290330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 132290331 . A . PASS END=132290331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:17,0 chr2 132290332 . C . PASS END=132290354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,720:0,44,255:19,0 chr2 132290437 . C . PASS END=132290437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 132290438 . T . PASS END=132290438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:17,0 chr2 132290439 . G . PASS END=132290440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,810:0,57,255:18,0 chr2 132290441 . G . LowGQ END=132290441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,574:20,0,255:16,0 chr2 132290442 . G . PASS END=132290444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 132290445 . C . PASS END=132290446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 132290447 . T . PASS END=132290447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:19,0 chr2 132290448 . C . PASS END=132290458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 132290459 . T . PASS END=132290460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 132290461 . G . PASS END=132290472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 132290473 . A . PASS END=132290473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 132290474 . G . PASS END=132290481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,908:0,72,255:25,0 chr2 132290482 . G . PASS END=132290514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1031:0,81,255:32,0 chr2 132290586 . G . PASS END=132290642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,108,1506:0,108,255:40,0 chr2 132290842 . C . PASS END=132290964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1186:0,83,255:40,0 chr2 132290965 . G . PASS END=132290971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1108:0,74,255:26,0 chr2 132509131 . A . PASS END=132509158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,173,255:40,0 chr2 132558465 . C . PASS END=132558510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1272:0,92,255:38,0 chr2 132908485 . C . PASS END=132908549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,165,255:40,0 chr2 132911126 . T . PASS END=132911155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:26,0 chr2 132911156 . A . PASS END=132911164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 132911165 . A . PASS END=132911165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr2 132911166 . A . PASS END=132911168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 132911169 . A . PASS END=132911169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:27,0 chr2 132911170 . T . PASS END=132911185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr2 132911186 . A . PASS END=132911186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:27,0 chr2 132911187 . G . PASS END=132911191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 132911192 . G . PASS END=132911235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,901:0,64,255:26,0 chr2 132911236 . A . PASS END=132911236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:22,0 chr2 132911237 . T . PASS END=132911245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 132911246 . T . PASS END=132911246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:18,0 chr2 132911247 . A . PASS END=132911248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 132911249 . G . PASS END=132911250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 132911251 . C . PASS END=132911257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr2 132911258 . G . PASS END=132911267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:14:0,36,540:0,42,255:13,0 chr2 132912235 . C . PASS END=132912260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,131,255:40,0 chr2 132912261 . A . PASS END=132912341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:42:0,87,1305:0,123,255:40,0 chr2 132914882 . C . PASS END=132914884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 132914885 . C . PASS END=132914885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 132914886 . A . PASS END=132914886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 132914887 . T . PASS END=132914890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:29,0 chr2 132914891 . A . PASS END=132914891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 132914892 . A . PASS END=132914905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1096:0,90,255:35,0 chr2 132914906 . A . PASS END=132914906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:34,0 chr2 132914907 . C . PASS END=132914980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1170:0,81,255:38,0 chr2 132914981 . C . PASS END=132914996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:17:0,45,675:0,51,255:17,0 chr2 132919061 . C . PASS END=132919061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 132919062 . T . PASS END=132919062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 132919063 . C . PASS END=132919063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 132919064 . T . PASS END=132919064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 132919065 . T . PASS END=132919080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:13,0 chr2 132919081 . G . PASS END=132919081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 132919082 . T . PASS END=132919082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 132919083 . T . PASS END=132919106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:14:0,41,490:0,41,255:19,0 chr2 132919107 . T . PASS END=132919129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 132919130 . T . PASS END=132919171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 132919172 . T . PASS END=132919172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 132919173 . G . PASS END=132919196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,629:0,45,255:17,0 chr2 132919197 . T . PASS END=132919203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr2 132919204 . G . PASS END=132919204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr2 132919205 . A . PASS END=132919205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 132919206 . C . PASS END=132919206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr2 132919207 . C . PASS END=132919209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 132919210 . C . PASS END=132919213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 132919214 . C . PASS END=132919218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 132919219 . G . PASS END=132919230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 132919231 . C . PASS END=132919234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr2 132919235 . G . PASS END=132919241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:9:9:0,9,135:0,27,255:3,0 chr2 132919242 . T . PASS END=132919278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 133066882 . A . PASS END=133066896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,191,255:40,0 chr2 133070442 . G . PASS END=133070567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:34:0,81,1215:0,98,255:40,0 chr2 133070568 . G . PASS END=133070568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 133074682 . A . PASS END=133075463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:91:40:0,91,1463:0,91,255:40,2 chr2 133075464 . C . PASS END=133075464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1496:0,71,255:37,0 chr2 133075465 . C . PASS END=133075928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:89:40:0,89,1488:0,89,255:40,0 chr2 133075929 . T . PASS END=133075965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,176,255:40,0 chr2 133075966 . T C, 45.59 PASS DP=66;MQ=68.16;MQRankSum=0.820;ReadPosRankSum=3.996;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,32,0:0.492,0.000:65:14,19,0:19,13,0:43:80,0,44,1087,1094,2180:255,0,255:30,0:4.5590e+01,1.9933e-04,4.7375e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,9,19,13:15,18,14,18 chr2 133075967 . C . PASS END=133076003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,170,255:40,0 chr2 133076004 . G . PASS END=133076220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,99,1485:0,101,255:40,1 chr2 133076221 . G . PASS END=133076221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:32,0 chr2 133076222 . T . PASS END=133076228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,99,1485:0,114,255:35,0 chr2 133076229 . A . PASS END=133076229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:34,0 chr2 133076230 . A . PASS END=133076271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,88,255:35,0 chr2 133076272 . C . PASS END=133076281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,67,255:26,0 chr2 133076282 . A . PASS END=133076294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:52:21:0,52,768:0,52,255:19,0 chr2 133076295 . A . PASS END=133076295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,674:0,21,255:17,0 chr2 133076296 . G . PASS END=133076309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:18,0 chr2 133174616 . A . PASS END=133174625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 133174626 . C . PASS END=133174626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 133174627 . C . PASS END=133174632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr2 133174633 . C . PASS END=133174672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,901:0,66,255:26,0 chr2 133174673 . G . PASS END=133174677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:27,0 chr2 133174678 . C . PASS END=133174680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1006:0,68,255:26,0 chr2 133174681 . G . PASS END=133174681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 133174682 . T . PASS END=133174682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,749:0,36,255:25,0 chr2 133174683 . T . PASS END=133174686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 133174687 . G . PASS END=133174691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 133174692 . C . PASS END=133174692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr2 133174693 . C . PASS END=133174709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,937:0,65,255:26,0 chr2 133174710 . C . PASS END=133174726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1210:0,93,255:32,0 chr2 133174727 . C . PASS END=133174763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1073:0,93,255:33,0 chr2 133174764 . C T, 34.32 PASS DP=38;MQ=249.97;MQRankSum=4.764;ReadPosRankSum=4.152;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,11,0:0.289,0.000:38:12,9,0:15,2,0:34:69,0,50,365,952,1316:238,0,255:26,0:3.4317e+01,1.6293e-03,5.3002e+01,3.6464e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,12,4,7:10,17,6,5 chr2 133174765 . C . PASS END=133174801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,102,1530:0,110,255:40,0 chr2 133174802 . T . PASS END=133174848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:36:0,96,1249:0,97,255:36,0 chr2 133174849 . G . PASS END=133174849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1235:0,69,255:34,0 chr2 133174850 . G . PASS END=133174890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,89,255:35,0 chr2 133174891 . C . PASS END=133174901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1092:0,74,255:26,0 chr2 133174902 . G . PASS END=133174905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:24,0 chr2 133174906 . T . PASS END=133174918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:21,0 chr2 133174919 . T . PASS END=133174922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:18,0 chr2 133174923 . G . PASS END=133174925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 133174926 . A . PASS END=133174928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 133174929 . C . PASS END=133174930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 133174931 . C . PASS END=133174932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr2 133174933 . G . PASS END=133174961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:22,0 chr2 133174962 . A . PASS END=133174963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 133174964 . G . PASS END=133174964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,798:0,30,255:20,0 chr2 133174965 . C . PASS END=133174969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 133174970 . A . PASS END=133174970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 133174971 . G . PASS END=133174973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 133174974 . A . PASS END=133174974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:22,0 chr2 133174975 . C . PASS END=133174998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,925:0,62,255:26,0 chr2 133174999 . A G, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=-0.255;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,16,0:0.571,0.000:28:9,7,0:3,9,0:48:85,0,49,572,421,993:255,0,255:12,0:5.0000e+01,7.2481e-05,5.1751e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,3,8,8:10,2,7,9 chr2 133175000 . C . PASS END=133175000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 133175001 . T . PASS END=133175017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,939:0,68,255:26,0 chr2 133175018 . A . PASS END=133175020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 133175021 . G . PASS END=133175025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 133175026 . C . PASS END=133175028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 133175029 . T . PASS END=133175029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr2 133175030 . C . PASS END=133175036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr2 133175037 . T . PASS END=133175037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 133175038 . C . PASS END=133175096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1196:0,86,255:33,0 chr2 133175097 . T . PASS END=133175107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,80,255:26,0 chr2 133175108 . C . PASS END=133175108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1011:0,59,255:22,0 chr2 133175109 . T . PASS END=133175133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,809:0,61,255:26,0 chr2 133175134 . C . PASS END=133175138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 133175139 . G . PASS END=133175142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 133175143 . T . PASS END=133175148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:50:22:0,50,790:0,50,255:19,0 chr2 133175149 . C . PASS END=133175149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:17,0 chr2 133175150 . C . PASS END=133175162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr2 133175163 . T . PASS END=133175165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 133175166 . C . PASS END=133175168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:19,0 chr2 133175169 . G . PASS END=133175174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 133175175 . G . PASS END=133175217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,668:0,44,255:19,0 chr2 133175218 . G . PASS END=133175218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 133175219 . C . PASS END=133175244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr2 133175245 . T . PASS END=133175251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 133175252 . C . PASS END=133175259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 133175260 . C . PASS END=133175268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:23,0 chr2 133175269 . C . PASS END=133175269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 133175270 . G . PASS END=133175293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 133175294 . G . PASS END=133175294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 133175295 . C . PASS END=133175304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,65,255:21,0 chr2 133175305 . C . PASS END=133175321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,47,255:19,0 chr2 133175322 . T . PASS END=133175350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,457:0,36,255:12,0 chr2 133175351 . A . PASS END=133175354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 133175355 . A . PASS END=133175355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 133175356 . G . PASS END=133175366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 133175367 . A . PASS END=133175368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 133175369 . A . PASS END=133175382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:16,0 chr2 133175383 . G . PASS END=133175383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 133175384 . C . PASS END=133175395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 133175396 . A . PASS END=133175403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:34:15:0,34,540:0,34,255:13,0 chr2 133175404 . T . PASS END=133175404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 133175405 . C . PASS END=133175405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 133175406 . C . PASS END=133175409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 133175410 . G . PASS END=133175410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr2 133175411 . C . PASS END=133175411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 133175412 . T . PASS END=133175413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr2 133175414 . A . PASS END=133175416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 133175417 . A . PASS END=133175418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 133175419 . G . PASS END=133175420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 133175421 . C . PASS END=133175428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 133175429 . G . PASS END=133175429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 133175430 . A . PASS END=133175431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 133175432 . G . PASS END=133175432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 133175433 . A . PASS END=133175433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 133175434 . G . PASS END=133175435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,543:0,34,255:15,0 chr2 133175436 . G . PASS END=133175436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:13,0 chr2 133175437 . C . PASS END=133175463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 133175464 . C . PASS END=133175471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 133176059 . G . PASS END=133176097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1172:0,89,255:33,0 chr2 133176098 . A . PASS END=133176098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:29,0 chr2 133176099 . C . PASS END=133176102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 133186745 . A . PASS END=133186770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,200,255:40,0 chr2 133402674 . G . PASS END=133402684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:26,0 chr2 133402685 . G . PASS END=133402713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr2 133402714 . C . PASS END=133402734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,71,255:26,0 chr2 133402735 . T . PASS END=133402735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 133402736 . G . PASS END=133402789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:26,0 chr2 133402790 . C . PASS END=133402811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,975:0,81,255:30,0 chr2 133402812 . T . PASS END=133402812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 133402813 . T . PASS END=133402820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1133:0,80,255:31,0 chr2 133402821 . T . PASS END=133402821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:27,0 chr2 133402822 . C . PASS END=133402827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 133402828 . G . PASS END=133402828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:26,0 chr2 133402829 . G . PASS END=133402832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 133402833 . T . PASS END=133402833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 133402834 . C . PASS END=133402835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 133402836 . A . PASS END=133402836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr2 133402837 . C . PASS END=133402987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:31:0,81,1111:0,82,255:39,0 chr2 133402988 . C . PASS END=133402991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:33:0,75,1125:0,83,255:26,0 chr2 133402992 . T . PASS END=133403000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:29,0 chr2 133403001 . C . PASS END=133403001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 133403002 . G . PASS END=133403008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 133403009 . C . PASS END=133403009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 133403010 . G . PASS END=133403014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 133403015 . T . PASS END=133403015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 133403016 . C . PASS END=133403033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1178:0,83,255:33,0 chr2 133403034 . A . PASS END=133403034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1127:0,63,255:31,0 chr2 133403035 . G . PASS END=133403036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1095:0,85,255:31,0 chr2 133403037 . A . PASS END=133403037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:38:34:0,38,1108:0,38,255:29,0 chr2 133403038 . G . PASS END=133403104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:33:0,81,1091:0,81,255:40,0 chr2 133403105 . T . PASS END=133403105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:29:44:0,29,1276:0,29,255:37,0 chr2 133403106 . C . PASS END=133403112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,113,1574:0,113,255:40,0 chr2 133403113 . G . PASS END=133403143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:33:0,90,1350:0,99,255:40,0 chr2 133403144 . G . PASS END=133403144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:30,0 chr2 133403145 . C . PASS END=133403149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr2 133403150 . G A, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.805;ReadPosRankSum=2.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,16,0:0.500,0.000:32:8,7,0:8,9,0:48:85,0,50,572,543,1116:255,0,255:16,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,7,9:7,9,8,8 chr2 133403151 . A . PASS END=133403165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1111:0,80,255:32,0 chr2 133403166 . A . PASS END=133403166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 133403167 . G . PASS END=133403171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 133403172 . A . PASS END=133403179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:25,0 chr2 133403618 . T . PASS END=133403621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 133403622 . C . PASS END=133403622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 133403623 . A . PASS END=133403630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:30,0 chr2 133403631 . G . PASS END=133403631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 133403632 . A . PASS END=133403632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 133403633 . G . PASS END=133403633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 133403634 . A . PASS END=133403706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:30:0,90,1034:0,90,255:40,0 chr2 133403707 . T . PASS END=133403707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:34:38:0,34,1161:0,34,255:32,0 chr2 133403708 . C . PASS END=133403841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:30:0,80,1155:0,80,255:40,0 chr2 133403842 . G . PASS END=133403850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr2 133403851 . T . PASS END=133403853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:18,0 chr2 133425973 . C . PASS END=133425973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1192:0,83,255:32,0 chr2 133425974 . G . PASS END=133425974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:31,0 chr2 133425975 . G . PASS END=133426110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:33:0,81,1249:0,81,255:40,0 chr2 133427420 . C . PASS END=133427460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:19,0 chr2 133427461 . C . PASS END=133427474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 133427475 . A . PASS END=133427475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 133427476 . A . PASS END=133427476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 133427477 . A . PASS END=133427477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,599:0,43,255:19,0 chr2 133427478 . A . PASS END=133427480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 133427481 . T . PASS END=133427481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:19,0 chr2 133427482 . T . PASS END=133427482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 133427483 . G . PASS END=133427483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr2 133427484 . C . PASS END=133427484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 133427485 . C . PASS END=133427489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:18,0 chr2 133427490 . T . PASS END=133427490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 133427491 . G . PASS END=133427504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,43,255:17,0 chr2 133427505 . T . PASS END=133427505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:12,0 chr2 133427620 . T . PASS END=133427639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,413:0,39,255:13,0 chr2 133427640 . T . PASS END=133427641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 133427642 . G . PASS END=133427645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 133427646 . A . PASS END=133427647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:10,0 chr2 133427648 . A . PASS END=133427650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 133427651 . A . PASS END=133427653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 133427654 . C . PASS END=133427655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 133427656 . C . PASS END=133427680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:10:9:0,10,180:0,10,255:6,0 chr2 133430597 . T . PASS END=133430878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:42:0,120,1800:0,125,255:40,0 chr2 133483200 . C . PASS END=133483205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 133483206 . C . PASS END=133483206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:33,0 chr2 133483207 . A . PASS END=133483332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1305:0,95,255:40,0 chr2 133486389 . C . PASS END=133486525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1215:0,89,255:40,0 chr2 133489310 . C . PASS END=133489310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,643:0,13,255:17,0 chr2 133489311 . T . PASS END=133489313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 133489314 . G . PASS END=133489314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr2 133489315 . G . PASS END=133489317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:18,0 chr2 133489318 . G . PASS END=133489319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:27:20:0,27,653:0,27,255:18,0 chr2 133489320 . T . PASS END=133489327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,613:0,43,255:19,0 chr2 133489328 . G . PASS END=133489328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,665:0,27,255:17,0 chr2 133489329 . G . PASS END=133489334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr2 133489335 . G . PASS END=133489338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 133489339 . T . PASS END=133489339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 133489340 . G . PASS END=133489345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,805:0,66,255:24,0 chr2 133489346 . G . PASS END=133489346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 133489347 . C . PASS END=133489351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 133489352 . T . PASS END=133489352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 133489353 . C . PASS END=133489367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,922:0,62,255:26,0 chr2 133489368 . G . PASS END=133489369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr2 133489370 . T . PASS END=133489372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:24,0 chr2 133489373 . G . PASS END=133489375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 133489376 . C . PASS END=133489382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 133489383 . G . PASS END=133489385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 133489386 . A . PASS END=133489402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,911:0,67,255:26,0 chr2 133489403 . C . PASS END=133489417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:28,0 chr2 133489418 . C . PASS END=133489425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1037:0,71,255:26,0 chr2 133489426 . G . PASS END=133489426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 133489427 . A . PASS END=133489427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr2 133489428 . G . PASS END=133489538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1002:0,87,255:36,0 chr2 133489539 . G . PASS END=133489539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr2 133489540 . T . PASS END=133489544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:92:36:0,92,1288:0,92,255:34,0 chr2 133489545 . T . PASS END=133489545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:30,0 chr2 133489546 . C . PASS END=133489563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1250:0,102,255:35,0 chr2 133489564 . G . PASS END=133489577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,99,1485:0,105,255:34,0 chr2 133489578 . A . PASS END=133489578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:33,0 chr2 133489579 . A . PASS END=133489600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1151:0,85,255:34,0 chr2 133489601 . A G, 49.73 PASS DP=32;MQ=248.67;MQRankSum=4.154;ReadPosRankSum=3.059;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,15,0:0.469,0.000:32:9,9,0:8,6,0:48:85,0,50,507,579,1087:255,0,255:16,0:4.9726e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,10,6,9:5,12,10,5 chr2 133489602 . T . PASS END=133489613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 133489614 . G . PASS END=133489624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 133531389 . C . PASS END=133531467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,107,1421:0,107,255:40,0 chr2 133538625 . C . PASS END=133538630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 133538631 . G . PASS END=133538636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 133538637 . T . PASS END=133538637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 133538638 . G . PASS END=133538769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1003:0,84,255:40,0 chr2 133538770 . C . PASS END=133538777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 133538778 . C . PASS END=133538781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 133538782 . G . PASS END=133538802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr2 133539513 . C . PASS END=133539528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:30:0,85,962:0,85,255:34,0 chr2 133539529 . T . PASS END=133539565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1244:0,91,255:40,0 chr2 133539566 . G A, 49.42 PASS DP=54;MQ=249.48;MQRankSum=6.280;ReadPosRankSum=0.295;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,25,0:0.463,0.000:54:17,15,0:12,10,0:48:84,0,50,828,1034,1862:255,0,255:25,0:4.9425e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,15,12,13:14,15,12,13 chr2 133539567 . T . PASS END=133539603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,146,255:40,0 chr2 133539604 . T . PASS END=133540017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:80:31:0,80,1147:0,80,255:40,0 chr2 133540018 . C . PASS END=133540031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,71,255:26,0 chr2 133540032 . T . PASS END=133540032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 133540033 . G . PASS END=133540041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 133540042 . A . PASS END=133540045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,798:0,50,255:19,0 chr2 133540046 . T . PASS END=133540050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 133540051 . G . PASS END=133540096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,629:0,43,255:20,0 chr2 133540097 . C . PASS END=133540099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 133540100 . T . PASS END=133540117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,50,255:18,0 chr2 133540118 . A . PASS END=133540118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,570:0,18,255:17,0 chr2 133540119 . G . PASS END=133540127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,637:0,40,255:19,0 chr2 133540128 . G . PASS END=133540128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:15,0 chr2 133540129 . T . PASS END=133540134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 133540135 . T . PASS END=133540135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 133540136 . G . PASS END=133540165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,637:0,40,255:18,0 chr2 133540166 . T . PASS END=133540166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 133540167 . T . PASS END=133540171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 133540172 . A . PASS END=133540172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 133540173 . A . PASS END=133540182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 133540183 . C . PASS END=133540184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 133540185 . T . PASS END=133540199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,607:0,51,255:17,0 chr2 133540200 . T . PASS END=133540200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 133540201 . C . PASS END=133540211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr2 133540212 . A . PASS END=133540212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 133540213 . A . PASS END=133540233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr2 133540234 . C . PASS END=133540246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,565:0,32,255:13,0 chr2 133540247 . G . PASS END=133540255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,550:0,45,255:15,0 chr2 133540256 . A . PASS END=133540256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 133540257 . G . PASS END=133540294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:17,0 chr2 133540295 . C . PASS END=133540295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 133540296 . C . PASS END=133540297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 133540298 . A . PASS END=133540301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 133540302 . T . PASS END=133540304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 133540305 . C . PASS END=133540306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 133540307 . G . PASS END=133540307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 133540308 . C . PASS END=133540319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr2 133540320 . G . PASS END=133540320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 133540321 . A . PASS END=133540323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 133540324 . T . PASS END=133540324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 133540325 . C . PASS END=133540357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr2 133540358 . C . PASS END=133540358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 133540359 . G . PASS END=133540359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 133540360 . A . PASS END=133540360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 133540361 . G . PASS END=133540366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 133540367 . C . PASS END=133540367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:21,0 chr2 133540368 . C . PASS END=133540368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 133540369 . C . PASS END=133540375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 133540376 . G . PASS END=133540376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:20,0 chr2 133540377 . G . PASS END=133540383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,760:0,63,255:22,0 chr2 133540384 . T . PASS END=133540384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 133540385 . C . PASS END=133540386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 133540387 . C . PASS END=133540387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 133540388 . C . PASS END=133540389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 133540390 . A . PASS END=133540390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,626:0,41,255:22,0 chr2 133540391 . C . PASS END=133540391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 133540392 . A . PASS END=133540392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,764:0,58,255:22,0 chr2 133540393 . T . PASS END=133540393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,782:0,28,255:21,0 chr2 133540394 . G . PASS END=133540395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,814:0,42,255:21,0 chr2 133540396 . G . PASS END=133540399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 133540400 . A . PASS END=133540400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 133540401 . G . PASS END=133540401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 133540402 . A . PASS END=133540402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,747:0,28,255:23,0 chr2 133540403 . A . PASS END=133540403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 133540404 . G . PASS END=133540404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:24,0 chr2 133540405 . G . PASS END=133540407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 133540408 . C . PASS END=133540408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,790:0,28,255:23,0 chr2 133540409 . C . PASS END=133540414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 133540415 . G . PASS END=133540415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 133540416 . G . PASS END=133540419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr2 133540420 . A . PASS END=133540422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,793:0,42,255:23,0 chr2 133540423 . T . PASS END=133540424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 133540425 . T . PASS END=133540425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr2 133540426 . C . PASS END=133540426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 133540427 . C . PASS END=133540427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:21,0 chr2 133540428 . G . PASS END=133540431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 133540432 . A . PASS END=133540457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,44,255:19,0 chr2 133540458 . C . PASS END=133540461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,687:0,63,255:22,0 chr2 133540462 . T . PASS END=133540463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,618:0,49,255:21,0 chr2 133540464 . T . PASS END=133540470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr2 133540471 . T . PASS END=133540472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:19,0 chr2 133540473 . T . PASS END=133540473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 133540474 . T . PASS END=133540474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 133540475 . G . PASS END=133540508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,818:0,62,255:26,0 chr2 133540509 . T . PASS END=133540512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 133540513 . T . PASS END=133540514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,950:0,48,255:29,2 chr2 133540515 . G . PASS END=133540518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 133540519 . G . PASS END=133540519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 133540520 . C . PASS END=133540550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1147:0,80,255:34,0 chr2 133540551 . A . PASS END=133540551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:34,0 chr2 133540552 . A . PASS END=133540567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1281:0,92,255:36,0 chr2 133540568 . T . PASS END=133540592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1227:0,91,255:36,0 chr2 133540593 . G . PASS END=133540593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1394:0,65,255:35,0 chr2 133540594 . G . PASS END=133540604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1449:0,101,255:40,0 chr2 133540605 . G T, 50.00 PASS DP=42;MQ=249.98;MQRankSum=4.960;ReadPosRankSum=2.525;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,26,0:0.619,0.000:42:9,8,0:7,18,0:46:85,0,45,930,533,1463:255,0,255:15,0:5.0000e+01,1.1597e-04,4.7779e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,6,14,12:9,7,16,10 chr2 133540606 . G . PASS END=133540642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:41:0,93,1280:0,93,255:40,0 chr2 133540643 . A . PASS END=133541190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:40:0,93,1474:0,93,255:40,0 chr2 133541191 . T . PASS END=133541191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1659:0,58,255:38,0 chr2 133541192 . C . PASS END=133541210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1395:0,81,255:38,0 chr2 133541211 . T . PASS END=133541211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:33,0 chr2 133541212 . G . PASS END=133541263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:32:0,86,1166:0,86,255:35,0 chr2 133541264 . A . PASS END=133541270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,77,255:26,0 chr2 133541271 . T . PASS END=133541273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 133541274 . G . PASS END=133541278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,961:0,65,255:26,0 chr2 133541279 . C . PASS END=133541281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 133541282 . C . PASS END=133541284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 133541285 . A . PASS END=133541290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 133541291 . T . PASS END=133541292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1102:0,62,255:26,0 chr2 133541293 . C . PASS END=133541295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 133541296 . T . PASS END=133541296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 133541297 . G . PASS END=133541341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:29,0 chr2 133541342 . T . PASS END=133541397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,807:0,66,255:26,0 chr2 133541398 . G . PASS END=133541404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 133541405 . C . PASS END=133541407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 133541408 . C . PASS END=133541408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 133541409 . T . PASS END=133541443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1111:0,90,255:32,0 chr2 133541444 . T C, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=2.720;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:16,17,0:0.515,0.000:33:5,9,0:11,8,0:48:85,0,50,579,572,1151:255,0,255:15,0:5.0000e+01,6.5492e-05,5.2958e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,6,11:11,5,12,5:133541444 chr2 133541445 . G . PASS END=133541453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr2 133541454 . A G, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=2.640;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,17,0:0.548,0.000:31:4,9,0:10,8,0:48:85,0,49,579,501,1080:255,0,255:14,0:5.0000e+01,6.8081e-05,5.2445e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,9,8:10,4,9,8:133541444 chr2 133541455 . T . PASS END=133541481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1057:0,80,255:31,0 chr2 133541482 . G . PASS END=133541493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:28:0,60,990:0,60,255:26,0 chr2 133541494 . T . PASS END=133541512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:25:0,68,984:0,68,255:24,0 chr2 133541513 . T . PASS END=133541513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 133541514 . T . PASS END=133541537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,825:0,61,255:25,0 chr2 133541538 . G . PASS END=133541566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 133541567 . C . PASS END=133541568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 133541569 . G . PASS END=133541574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 133541575 . C T, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.937;ReadPosRankSum=1.732;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,14,0:0.609,0.000:23:4,7,0:5,7,0:47:85,0,48,493,314,807:255,0,255:8,0:5.0000e+01,8.1024e-05,5.0621e+01,4.5000e+02,3.4867e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,2,4,10:2,7,7,7 chr2 133541576 . G . PASS END=133541582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 133541583 . C . PASS END=133541583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr2 133541584 . C . PASS END=133541584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 133541585 . T . PASS END=133541586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 133541587 . G . PASS END=133541590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 133541591 . G . PASS END=133541591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 133541592 . G . PASS END=133541612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 133541613 . A . PASS END=133541614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 133541615 . C . PASS END=133541615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 133541616 . C . PASS END=133541631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:22,0 chr2 133541632 . A . PASS END=133541632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:21,0 chr2 133541633 . G . PASS END=133541636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 133541637 . C . PASS END=133541638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr2 133541639 . G . PASS END=133541644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 133541645 . A . PASS END=133541645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,856:0,51,255:24,0 chr2 133541646 . T . PASS END=133541680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,917:0,64,255:26,0 chr2 133541681 . A . PASS END=133541681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 133541682 . A . PASS END=133541682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 133541683 . T . PASS END=133541683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 133541684 . G . PASS END=133541685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 133541686 . C . PASS END=133541686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 133541687 . A . PASS END=133541710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,915:0,64,255:26,0 chr2 133541711 . C . PASS END=133541715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 133541716 . T . PASS END=133541718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr2 133541719 . T . PASS END=133541720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,976:0,48,255:25,0 chr2 133541721 . G . PASS END=133541725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1064:0,74,255:28,0 chr2 133541726 . C . PASS END=133541741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:31,0 chr2 133541742 . C . PASS END=133541742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 133541743 . T . PASS END=133541748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1064:0,90,255:30,0 chr2 133541749 . G . PASS END=133541749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:26,0 chr2 133541750 . C . PASS END=133541750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 133541751 . A . PASS END=133541751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 133541752 . T . PASS END=133541976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:33:0,86,1241:0,86,255:40,0 chr2 133541977 . T . PASS END=133542013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,173,255:40,0 chr2 133542014 . T C, 50.00 PASS DP=62;MQ=250.00;MQRankSum=6.758;ReadPosRankSum=2.872;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,31,0:0.500,0.000:62:15,12,0:16,19,0:48:85,0,50,1063,1004,2067:255,0,255:27,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,19,12:14,17,16,15 chr2 133542015 . G . PASS END=133542051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,135,255:40,0 chr2 133542052 . G . PASS END=133542507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:35:0,88,1266:0,88,255:40,0 chr2 133542508 . A . PASS END=133542510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 133542511 . T . PASS END=133542511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr2 133542512 . T . PASS END=133542521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,95,255:36,0 chr2 133542522 . A . PASS END=133542544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,74,255:26,0 chr2 133542545 . G A, 50.00 PASS DP=26;MQ=245.95;MQRankSum=3.060;ReadPosRankSum=0.591;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,14,0:0.538,0.000:26:6,7,0:6,7,0:48:85,0,50,501,429,930:255,0,255:9,0:5.0000e+01,6.7045e-05,5.2663e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,6,5,9:4,8,8,6 chr2 133542546 . G . PASS END=133542548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:20,0 chr2 133542549 . T . PASS END=133542550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,737:0,49,255:19,0 chr2 133542551 . A . PASS END=133542555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:20,0 chr2 133542556 . T . PASS END=133542556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:19,0 chr2 133542557 . G . PASS END=133542562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 133542563 . A . PASS END=133542564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 133542565 . C . PASS END=133542566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 133542567 . A . PASS END=133542584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:19:0,47,676:0,47,255:19,0 chr2 133542585 . C G, 50.00 PASS DP=19;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=-0.122;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:4,6,0:5,4,0:48:85,0,50,358,322,680:255,0,255:9,0:5.0000e+01,6.5751e-05,5.2888e+01,3.5773e+02,3.5673e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,5,5:8,1,5,5 chr2 133542586 . T . PASS END=133542586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 133542587 . T . PASS END=133542592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:18,0 chr2 133542593 . A . PASS END=133542622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:13:0,32,450:0,32,255:13,0 chr2 133542623 . C . PASS END=133542652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr2 133542653 . G . PASS END=133542653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 133542654 . A . PASS END=133542666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 133542667 . T . PASS END=133542670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 133542671 . G . PASS END=133542700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr2 133542701 . C . PASS END=133542710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 133542711 . T . PASS END=133542711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 133542712 . G . PASS END=133542729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 133542730 . G . PASS END=133542730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 133542731 . G . PASS END=133542736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:17,0 chr2 133542737 . C . PASS END=133542737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:16,0 chr2 133542738 . T . PASS END=133542741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 133542742 . T . PASS END=133542742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,523:0,37,255:17,0 chr2 133542743 . C . PASS END=133542744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 133542745 . C . PASS END=133542747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 133542748 . A . PASS END=133542749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 133542750 . G . PASS END=133542755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 133542756 . C . PASS END=133542756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 133542757 . T . PASS END=133542782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr2 133542783 . G . PASS END=133542783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:22,0 chr2 133542784 . G . PASS END=133542791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:25,0 chr2 133542792 . T . PASS END=133542792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 133542793 . T . PASS END=133542824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr2 133542825 . T . PASS END=133542825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 133542826 . G . PASS END=133542828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr2 133542829 . T . PASS END=133542829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:24,0 chr2 133542830 . T . PASS END=133542853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,885:0,69,255:25,0 chr2 133542854 . A . PASS END=133542856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 133542857 . G . PASS END=133542876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr2 133542877 . A . PASS END=133542879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 133542880 . T . PASS END=133542880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 133542881 . A . PASS END=133542881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 133542882 . C . PASS END=133542929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,947:0,65,255:26,0 chr2 133542930 . A . PASS END=133542930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:23,0 chr2 133542931 . A . PASS END=133542933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 133542934 . T . PASS END=133542934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr2 133542935 . G . PASS END=133542950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,915:0,78,255:26,0 chr2 133542951 . G . PASS END=133542952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 133542953 . A . PASS END=133543009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,933:0,65,255:26,0 chr2 133543010 . C . PASS END=133543012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 133543013 . C . PASS END=133543017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1086:0,74,255:26,0 chr2 133543018 . C . PASS END=133543020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 133543021 . C . PASS END=133543023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1061:0,71,255:25,0 chr2 133543024 . T . PASS END=133543291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:30:0,81,1215:0,86,255:40,0 chr2 133547596 . C . PASS END=133547610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1303:0,95,255:37,0 chr2 133547611 . C . PASS END=133547611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr2 133547612 . T . PASS END=133547778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:35:0,89,1222:0,89,255:40,0 chr2 133554201 . G . PASS END=133554250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,112,1800:0,112,255:40,0 chr2 133554251 . C . PASS END=133554287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,122,255:40,0 chr2 133554288 . A G, 194.46 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,28,0:0,21,0:144:232,147,0,332,332,332:255,147,0:0,0:1.9446e+02,1.4446e+02,0.0000e+00,3.2923e+02,3.6400e+02,3.3224e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,27:0,0,23,26 chr2 133554289 . C . PASS END=133554302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,112,1408:0,112,255:40,0 chr2 133618065 . C . PASS END=133618184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:83:43:0,83,1635:0,83,255:40,0 chr2 133626509 . C . PASS END=133626547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,124,255:40,0 chr2 133636421 . C . PASS END=133636489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:57:0,120,1800:0,152,255:40,0 chr2 133721293 . C . PASS END=133721442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:36:0,97,1165:0,97,255:40,0 chr2 133751725 . C . PASS END=133751812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:64:0,120,1800:0,157,255:40,0 chr2 133881356 . T . PASS END=133881371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,121,255:40,0 chr2 133887550 . C . PASS END=133887556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 133887557 . A . PASS END=133887557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 133887558 . C . PASS END=133887572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr2 133887573 . A . PASS END=133887573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 133887574 . C . PASS END=133887582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:26,0 chr2 133887583 . A . PASS END=133887583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 133887584 . T . PASS END=133887585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 133887586 . C . PASS END=133887679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,1008:0,80,255:38,0 chr2 133887680 . C . PASS END=133887683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,980:0,70,255:26,0 chr2 133971288 . C . PASS END=133971351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,137,255:40,0 chr2 134060609 . C . PASS END=134060681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:50:0,120,1800:0,146,255:40,0 chr2 134060682 . C . PASS END=134060682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 134139082 . C . PASS END=134139086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:128,0:128:99:128:0,120,1800:0,255,255:40,0 chr2 134275029 . C . PASS END=134275097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:91:0,120,1800:0,206,255:40,1 chr2 135011975 . A . PASS END=135012064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1096:0,80,255:34,0 chr2 135012065 . C . PASS END=135012068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1037:0,66,255:29,0 chr2 135012069 . T . PASS END=135012091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1231:0,86,255:30,0 chr2 135012092 . C . PASS END=135012101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 135012102 . G . PASS END=135012121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1215:0,89,255:33,0 chr2 135012122 . A . PASS END=135012122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 135012123 . T . PASS END=135012136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1147:0,90,255:31,0 chr2 135012137 . A . PASS END=135012137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 135012138 . A . PASS END=135012169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1143:0,86,255:32,0 chr2 135012170 . A . PASS END=135012170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:30,0 chr2 135012171 . G . PASS END=135012184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:32,0 chr2 135012185 . G . PASS END=135012215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,823:0,66,255:25,0 chr2 135027957 . A . PASS END=135028121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:34:0,91,1235:0,91,255:40,0 chr2 135075100 . A . PASS END=135075176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,168,255:40,0 chr2 135076221 . T . PASS END=135076310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,111,1545:0,114,255:40,0 chr2 135093788 . G . PASS END=135093859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:90:0,120,1800:0,255,255:40,0 chr2 135095830 . G . PASS END=135095846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:22,0 chr2 135095847 . T . PASS END=135095847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr2 135095848 . T . PASS END=135095853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,900:0,61,255:25,0 chr2 135095854 . A . PASS END=135095855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 135095856 . T . PASS END=135095856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:30,0 chr2 135095857 . C . PASS END=135095975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1161:0,80,255:40,0 chr2 135095976 . G . PASS END=135095991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,70,255:26,0 chr2 135099161 . G . PASS END=135099324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:33:0,81,1215:0,86,255:40,0 chr2 135099325 . C . PASS END=135099330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:31:0,51,765:0,93,255:18,0 chr2 135102501 . A . PASS END=135102635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:34:0,86,1241:0,86,255:40,0 chr2 135107376 . G . PASS END=135107509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:36:0,90,1350:0,108,255:40,0 chr2 135119846 . C . PASS END=135119979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:37:0,99,1382:0,101,255:40,0 chr2 135132667 . A . PASS END=135132741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,111,1665:0,123,255:40,0 chr2 135160559 . A . PASS END=135160560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 135160561 . T . PASS END=135160561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 135160562 . A . PASS END=135160576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,965:0,81,255:30,0 chr2 135160577 . G . PASS END=135160577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr2 135160578 . A . PASS END=135160708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:31:0,80,1155:0,80,255:40,0 chr2 135170440 . T . PASS END=135170586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,104,1662:0,104,255:40,1 chr2 135180374 . C . PASS END=135180469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:31:0,80,1177:0,80,255:40,0 chr2 135180470 . A . PASS END=135180470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 135180471 . A . PASS END=135180490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1048:0,87,255:29,0 chr2 135185936 . A . PASS END=135186010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,148,255:40,0 chr2 135199329 . G . PASS END=135199339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:22,0 chr2 135199340 . T . PASS END=135199340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 135199341 . G . PASS END=135199360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:26,0 chr2 135199361 . C . PASS END=135199362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 135199363 . T . PASS END=135199363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 135199364 . C . PASS END=135199413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1178:0,83,255:32,0 chr2 135199414 . T . PASS END=135199425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr2 135199426 . G . PASS END=135199426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:24,0 chr2 135199427 . C . PASS END=135199443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:25,0 chr2 135199444 . C . PASS END=135199444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 135199445 . T . PASS END=135199449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 135199450 . T . PASS END=135199450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 135199451 . C . PASS END=135199452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 135199453 . T . PASS END=135199453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr2 135199454 . C . PASS END=135199456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 135199457 . G . PASS END=135199457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 135199458 . C . PASS END=135199460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 135199461 . C . PASS END=135199469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,720:0,47,255:19,0 chr2 135199470 . G . PASS END=135199470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:14,0 chr2 135199471 . A . PASS END=135199473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:17,0 chr2 135199474 . A . PASS END=135199474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,628:0,13,255:14,0 chr2 135199475 . G . PASS END=135199477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:16,0 chr2 135199478 . C . PASS END=135199478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr2 135199479 . A . PASS END=135199483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 135199484 . G . PASS END=135199484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr2 135199485 . A . PASS END=135199485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 135199486 . A . PASS END=135199486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 135206220 . G . PASS END=135206249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,869:0,69,255:26,0 chr2 135206250 . G . PASS END=135206259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1033:0,81,255:28,0 chr2 135206260 . A . PASS END=135206270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 135206271 . C . PASS END=135206311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,927:0,81,255:32,0 chr2 135206312 . A . PASS END=135206312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:29,0 chr2 135206313 . C . PASS END=135206326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:32,0 chr2 135206327 . G . PASS END=135206327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr2 135206328 . C . PASS END=135206339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:29,0 chr2 135206340 . C . PASS END=135206346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 135206347 . A . PASS END=135206347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr2 135206348 . G . PASS END=135206376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:24,0 chr2 135206377 . T . PASS END=135206409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 135206410 . T . PASS END=135206418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr2 135214287 . T . PASS END=135214296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:50:0,120,1800:0,145,255:40,0 chr2 135214297 . A . PASS END=135214347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:53:0,110,1800:0,110,255:40,0 chr2 135215603 . T . PASS END=135215610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1057:0,87,255:30,0 chr2 135215611 . A . PASS END=135215611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1100:0,63,255:30,0 chr2 135215612 . T . PASS END=135215744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1164:0,86,255:40,0 chr2 135223685 . C . PASS END=135223796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:30:0,90,1133:0,90,255:40,0 chr2 135250306 . T . PASS END=135250314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,162,255:40,0 chr2 135250315 . C . PASS END=135250317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 135260472 . C . PASS END=135260568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:29:0,81,1164:0,83,255:40,0 chr2 135308141 . A . PASS END=135308145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:24,0 chr2 135308146 . C . PASS END=135308146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr2 135308147 . T . PASS END=135308147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 135308148 . C . PASS END=135308161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:35,0 chr2 135308162 . T . PASS END=135308162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:34,0 chr2 135308163 . G . PASS END=135308219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1225:0,89,255:40,0 chr2 135308220 . G . PASS END=135308220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1145:0,55,255:29,0 chr2 135308221 . G . PASS END=135308232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:89:32:0,89,1030:0,89,255:32,0 chr2 135309619 . T . PASS END=135309662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:69:0,120,1800:0,174,255:40,0 chr2 135344201 . T . PASS END=135344207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,885:0,64,255:26,0 chr2 135344208 . G . PASS END=135344210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr2 135344211 . A . PASS END=135344212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,910:0,70,255:28,0 chr2 135344213 . T . PASS END=135344350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,1035:0,80,255:40,0 chr2 135344351 . G . PASS END=135344364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 135470770 . T . PASS END=135470772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,886:0,75,255:25,0 chr2 135470773 . A . PASS END=135470781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr2 135470782 . C . PASS END=135470809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1063:0,80,255:37,0 chr2 135470810 . G . PASS END=135470810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:35,0 chr2 135470811 . A . PASS END=135470834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,105,1575:0,111,255:37,0 chr2 135470835 . T . PASS END=135470835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr2 135470836 . T . PASS END=135470838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:37,0 chr2 135470839 . T . PASS END=135470839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr2 135470840 . G . PASS END=135470855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:98:36:0,98,1327:0,98,255:36,0 chr2 135470856 . T . PASS END=135470856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1233:0,53,255:32,0 chr2 135470857 . G . PASS END=135470862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:35,0 chr2 135470863 . T . PASS END=135470863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:33,0 chr2 135470864 . C . PASS END=135470864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 135470865 . A . PASS END=135470865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:33,0 chr2 135470866 . G . PASS END=135470884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1318:0,92,255:36,0 chr2 135470885 . T . PASS END=135470885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr2 135470886 . A . PASS END=135470889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1312:0,94,255:36,0 chr2 135476304 . C . PASS END=135476335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:9,0 chr2 135476336 . C . PASS END=135476340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 135476341 . G . PASS END=135476364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 135476365 . C . PASS END=135476365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 135476366 . T . PASS END=135476417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr2 135476418 . C . PASS END=135476434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:7:0,12,180:0,21,249:6,0 chr2 135476435 . T . PASS END=135476505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,70:3,0 chr2 135596253 . A . PASS END=135596309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:65:0,120,1800:0,165,255:40,0 chr2 135602803 . A . PASS END=135602847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,140,255:40,0 chr2 135616831 . G . PASS END=135616927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,155,255:40,0 chr2 135619539 . G . PASS END=135619588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,120,1800:0,132,255:40,0 chr2 135620583 . A . PASS END=135620602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,676:0,51,255:19,0 chr2 135620603 . G . PASS END=135620603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr2 135620604 . C . PASS END=135620616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 135620617 . C . PASS END=135620617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 135620618 . C . PASS END=135620624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 135620965 . G . PASS END=135620965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 135620966 . C . PASS END=135620970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 135620971 . C . PASS END=135620973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 135620974 . G . PASS END=135620974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 135620975 . A . PASS END=135620997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:23:0,67,876:0,67,255:26,0 chr2 135620998 . C . PASS END=135621028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1048:0,84,255:34,0 chr2 135621029 . T . PASS END=135621029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,1064:0,44,255:30,0 chr2 135621030 . G . PASS END=135621184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1234:0,92,255:40,0 chr2 135621185 . T . PASS END=135621185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1036:0,71,255:28,0 chr2 135621186 . C . PASS END=135621197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:31:0,84,1091:0,88,255:30,0 chr2 135621198 . T . PASS END=135621201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 135625149 . G . PASS END=135625173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:29:0,87,1072:0,87,255:36,0 chr2 135625174 . T . PASS END=135625174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:34,0 chr2 135625175 . G . PASS END=135625242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:38:0,81,1316:0,81,255:40,0 chr2 135628535 . G . PASS END=135628630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:47:0,117,1755:0,121,255:40,0 chr2 135630025 . G . PASS END=135630025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1404:0,101,255:38,0 chr2 135630039 . G . PASS END=135630211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:44:0,102,1684:0,102,255:40,0 chr2 135655911 . G . PASS END=135656009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:87:39:0,87,1341:0,87,255:40,0 chr2 135659368 . A . PASS END=135659430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:42:0,87,1272:0,87,255:40,0 chr2 135676425 . A . PASS END=135676427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 135676428 . G . PASS END=135676430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 135676431 . T . PASS END=135676431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 135676432 . C . PASS END=135676468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,590:0,45,255:19,0 chr2 135676469 . G . PASS END=135676470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 135676471 . A . PASS END=135676508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 135676509 . G . PASS END=135676538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 135676539 . C . PASS END=135676543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 135676544 . G . PASS END=135676544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 135676545 . G . PASS END=135676569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:12,0 chr2 135676570 . A . PASS END=135676574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:11:0,20,405:0,20,255:9,0 chr2 135676575 . C . PASS END=135676575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:8,0 chr2 135676576 . T . PASS END=135676582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr2 135677380 . C . PASS END=135677423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,138,255:40,0 chr2 135677424 . T . PASS END=135677460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:48:0,84,1260:0,128,255:40,0 chr2 135677461 . T . PASS END=135677461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:78:48:0,78,1170:0,128,255:25,0 chr2 135694411 . A . PASS END=135694416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,147,255:40,0 chr2 135694417 . T . PASS END=135694539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:80:32:0,80,1125:0,80,255:40,0 chr2 135696572 . G . PASS END=135696633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,168,255:40,0 chr2 135700182 . G . PASS END=135700188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:78:0,120,1800:0,199,255:40,0 chr2 135700189 . G . PASS END=135700244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:70:0,120,1800:0,190,255:40,0 chr2 135703357 . G . PASS END=135703384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:80:0,120,1800:0,209,255:40,0 chr2 135703385 . A . PASS END=135703385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr2 135703459 . A . PASS END=135703487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:91:0,120,1800:0,232,255:40,0 chr2 135703492 . A . PASS END=135703552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:106:0,120,1800:0,255,255:40,0 chr2 135703671 . C . PASS END=135703700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:83:0,120,1800:0,157,255:40,0 chr2 135703701 . T . PASS END=135703716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:80:0,120,1800:0,185,255:40,0 chr2 135705300 . C . PASS END=135705300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 135705301 . A . PASS END=135705301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr2 135705302 . A . PASS END=135705304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:25:0,64,923:0,64,255:26,0 chr2 135705305 . G . PASS END=135705453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:29:0,81,1058:0,87,255:40,0 chr2 135705454 . C . PASS END=135705454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 135705455 . T . PASS END=135705458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 135705459 . A . PASS END=135705467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,900:0,68,255:26,0 chr2 135705468 . T . PASS END=135705469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 135710211 . A . PASS END=135710284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:81:0,120,1800:0,208,255:40,0 chr2 135710285 . A . PASS END=135710321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:90:0,120,1800:0,223,255:40,0 chr2 135710322 . A G, 50.00 PASS DP=91;MQ=250.00;MQRankSum=8.031;ReadPosRankSum=2.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,55,0:0.604,0.000:91:18,20,0:18,35,0:47:85,0,46,1901,1279,3181:255,0,255:32,0:5.0000e+01,9.4226e-05,4.9324e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,21,24,31:21,15,23,32 chr2 135710323 . T . PASS END=135710338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,228,255:40,0 chr2 135710800 . G . PASS END=135711478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:36:0,91,1488:0,91,255:40,0 chr2 135711479 . A . PASS END=135711515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:55:0,120,1800:0,133,255:40,0 chr2 135711516 . C T, 41.05 PASS DP=56;MQ=250.00;MQRankSum=6.074;ReadPosRankSum=3.132;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,19,0:0.339,0.000:56:18,9,0:19,10,0:41:76,0,50,643,1258,1901:255,0,255:36,0:4.1049e+01,3.6294e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,16,11,8:22,15,9,10 chr2 135711517 . A . PASS END=135711553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:54:0,120,1800:0,141,255:40,0 chr2 135711554 . C . PASS END=135711619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:42:0,98,1309:0,98,255:40,0 chr2 135711620 . C . PASS END=135711656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:98:38:0,98,1388:0,98,255:40,0 chr2 135711657 . G A, 49.97 PASS DP=39;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=2.683;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,19,0:0.487,0.000:39:13,8,0:7,11,0:48:85,0,50,614,628,1242:255,0,255:19,0:4.9966e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,10,9:9,11,13,6 chr2 135711658 . A . PASS END=135711694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1272:0,84,255:40,0 chr2 135711695 . A . PASS END=135712028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:87:39:0,87,1422:0,87,255:40,0 chr2 135712029 . T . PASS END=135712029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1494:0,72,255:37,0 chr2 135712030 . C . PASS END=135712201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1215:0,82,255:40,0 chr2 135712202 . A . PASS END=135712213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:22,0 chr2 135712214 . T . PASS END=135712214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 135712215 . G . PASS END=135712217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 135712218 . A . PASS END=135712218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 135722420 . T . PASS END=135722486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,126,255:40,0 chr2 135738387 . T . PASS END=135738388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 135738389 . A . PASS END=135738389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:20,0 chr2 135738390 . C . PASS END=135738395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 135738396 . C . PASS END=135738396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 135738397 . A . PASS END=135738401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 135738402 . C . PASS END=135738416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1025:0,84,255:30,0 chr2 135738417 . T . PASS END=135738417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 135738418 . G . PASS END=135738440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1119:0,90,255:31,0 chr2 135738441 . T . PASS END=135738441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 135738442 . G . PASS END=135738698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:29:0,80,1147:0,80,255:40,0 chr2 135738699 . G . PASS END=135738699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 135738700 . T . PASS END=135738704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,947:0,84,255:28,0 chr2 135738705 . C . PASS END=135738709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 135738710 . T . PASS END=135738721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1039:0,84,255:28,0 chr2 135738722 . T . PASS END=135738722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:26,0 chr2 135738723 . T . PASS END=135738739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 135738740 . T . PASS END=135738740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:27,0 chr2 135738741 . A . PASS END=135738747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:31,0 chr2 135738748 . T . PASS END=135738748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:30,0 chr2 135738749 . T . PASS END=135738752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 135738753 . A . PASS END=135738754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:28,0 chr2 135738755 . C . PASS END=135739072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:31:0,81,1215:0,92,255:40,0 chr2 135739073 . T . PASS END=135739080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,73,255:27,0 chr2 135739081 . C . PASS END=135739088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:28:0,48,720:0,71,255:18,0 chr2 135740750 . C . PASS END=135740838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:49:0,93,1800:0,93,255:40,2 chr2 135740839 . C . PASS END=135740875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,99,1800:0,99,255:40,0 chr2 135740876 . A G, 49.92 PASS DP=50;MQ=248.69;MQRankSum=6.049;ReadPosRankSum=1.738;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,24,0:0.480,0.000:50:17,14,0:9,10,0:48:85,0,50,851,856,1707:255,0,255:23,0:4.9920e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,18,8,16:9,17,12,12 chr2 135740877 . T . PASS END=135740901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,102,1530:0,125,255:40,0 chr2 135741246 . T . PASS END=135741390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:81:44:0,81,1215:0,85,255:40,0 chr2 135741391 . T . PASS END=135741395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:63:34:0,63,945:0,102,255:21,0 chr2 135743370 . C . PASS END=135745341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:92:42:0,92,1463:0,92,255:40,2 chr2 135745342 . A . PASS END=135745391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,110,1800:0,110,255:40,0 chr2 135745392 . G A, 49.63 PASS DP=58;MQ=250.00;MQRankSum=6.516;ReadPosRankSum=3.040;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,27,0:0.466,0.000:58:18,11,0:13,16,0:48:84,0,50,955,1072,2027:255,0,255:27,0:4.9632e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,19,15,12:17,14,7,20 chr2 135745393 . T . PASS END=135745442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:43:0,93,1643:0,93,255:40,0 chr2 135745443 . A . PASS END=135745507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1441:0,101,255:40,0 chr2 135745508 . C . PASS END=135745521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1328:0,100,255:38,0 chr2 135745522 . T . PASS END=135745522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:56:42:0,56,1324:0,56,255:36,0 chr2 135745523 . T . PASS END=135745544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:40:0,85,1345:0,85,255:40,0 chr2 135745545 . C T, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.396;ReadPosRankSum=1.393;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,20,0:0.500,0.000:40:12,10,0:8,10,0:48:85,0,50,710,715,1426:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,5,15:8,12,13,7 chr2 135745546 . C . PASS END=135745565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1218:0,86,255:31,0 chr2 135745566 . A . PASS END=135745566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:31,0 chr2 135745567 . A . PASS END=135745582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1089:0,93,255:33,0 chr2 135745583 . T . PASS END=135745591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:30,0 chr2 135745592 . T . PASS END=135745595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 135745596 . G . PASS END=135745620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1192:0,83,255:29,0 chr2 135745621 . T . PASS END=135745621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr2 135745622 . C . PASS END=135745632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 135745633 . T . PASS END=135745634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1164:0,63,255:27,0 chr2 135745635 . A . PASS END=135745649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1263:0,89,255:35,0 chr2 135745650 . A . PASS END=135745650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:33,0 chr2 135745651 . G . PASS END=135745684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:33:0,96,1158:0,97,255:37,0 chr2 135745685 . G . PASS END=135745709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:34:0,99,1427:0,102,255:39,0 chr2 135745710 . A . PASS END=135745710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr2 135745711 . A . PASS END=135745721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1665:0,117,255:39,0 chr2 135745722 . A G, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.109;ReadPosRankSum=3.352;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,25,0:0.641,0.000:39:7,14,0:7,11,0:45:85,0,43,886,501,1387:255,0,255:14,0:5.0000e+01,1.4833e-04,4.6171e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,16,9:5,9,17,8 chr2 135745723 . C . PASS END=135745759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1349:0,95,255:39,0 chr2 135745760 . G . PASS END=135745788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:38:0,81,1215:0,85,255:40,0 chr2 135745789 . C . PASS END=135745789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 135745790 . G . PASS END=135745790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:26,0 chr2 135745791 . C . PASS END=135745792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 135745793 . T . PASS END=135745797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:30,0 chr2 135745798 . A . PASS END=135745800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,79,255:24,0 chr2 135745801 . A . PASS END=135745801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1003:0,41,255:23,0 chr2 135745802 . G . PASS END=135745814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,990:0,72,255:24,0 chr2 135745815 . C . PASS END=135745815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr2 135745816 . A . PASS END=135745827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,825:0,69,255:23,0 chr2 135745828 . A . PASS END=135745828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:21,0 chr2 135745829 . A . PASS END=135745838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr2 135749107 . C . PASS END=135749150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,2:89:99:74:0,120,1800:0,183,255:40,0 chr2 135756308 . C . PASS END=135756331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,671:0,63,255:27,0 chr2 135756332 . T . PASS END=135756333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 135756334 . A . PASS END=135756334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 135756335 . G . PASS END=135756337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:29,0 chr2 135756338 . A . PASS END=135756338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr2 135756339 . A . PASS END=135756347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1070:0,90,255:35,0 chr2 135756348 . A . PASS END=135756348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:31,0 chr2 135756349 . T . PASS END=135756555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:29:0,81,1215:0,83,255:40,0 chr2 135756556 . G . PASS END=135756556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:27,0 chr2 135756557 . A . PASS END=135756560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 135756561 . T . PASS END=135756561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:26,0 chr2 135756562 . A . PASS END=135756562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 135756563 . T . PASS END=135756567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 135757507 . T . PASS END=135757585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,154,255:40,0 chr2 135763005 . C . PASS END=135763101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,117,1743:0,117,255:40,0 chr2 135779285 . C . PASS END=135779400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,114,1710:0,122,255:40,0 chr2 135781027 . C . PASS END=135781099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,210,255:40,1 chr2 135782196 . C . PASS END=135782217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:70:0,120,1800:0,194,255:40,0 chr2 135809874 . C . PASS END=135809874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 135809878 . A . PASS END=135809878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,775:0,55,255:22,0 chr2 135809879 . T . PASS END=135809880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 135809881 . G . PASS END=135809881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 135809882 . C . PASS END=135809891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr2 135809892 . T . PASS END=135809892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 135809893 . G . PASS END=135809895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:25,0 chr2 135809899 . A . PASS END=135809899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,906:0,26,255:22,0 chr2 135810000 . C . PASS END=135810002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 135810003 . G . PASS END=135810003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 135810004 . A . PASS END=135810004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 135810005 . A . PASS END=135810005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 135810006 . T . PASS END=135810007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 135810008 . C . PASS END=135810009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 135810010 . A . PASS END=135810010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 135810011 . G . PASS END=135810021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,972:0,68,255:26,0 chr2 135810022 . T . PASS END=135810023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 135810024 . A . PASS END=135810028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 135810029 . C . PASS END=135810031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 135810032 . C . PASS END=135810051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 135810052 . A . PASS END=135810055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr2 135815581 . G . PASS END=135815683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,190,255:40,0 chr2 135848568 . G . PASS END=135848700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:47:0,120,1800:0,122,255:40,0 chr2 135851185 . A . PASS END=135851263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,150,255:40,0 chr2 135870721 . G . PASS END=135870724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 135870725 . G . PASS END=135870740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,787:0,61,255:26,0 chr2 135870741 . T . PASS END=135870784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,1019:0,81,255:39,0 chr2 135870785 . T . PASS END=135870785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:35,0 chr2 135870786 . C . PASS END=135870840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1270:0,92,255:36,0 chr2 135872786 . T . PASS END=135872929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:37:0,81,1215:0,111,255:40,0 chr2 135872930 . G . PASS END=135872940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:71:27:0,71,1047:0,71,255:26,0 chr2 135872941 . A . PASS END=135872941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 135872942 . A . PASS END=135872947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 135872948 . G . PASS END=135872949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:48:27:0,48,856:0,48,255:24,0 chr2 135872950 . T . PASS END=135872951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 135878387 . A . PASS END=135878387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 135878389 . G . PASS END=135878489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:52:0,120,1800:0,142,255:40,0 chr2 135881735 . A . PASS END=135881816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:35:0,105,1274:0,105,255:40,0 chr2 135883750 . G . PASS END=135883820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:71:0,120,1800:0,197,255:40,0 chr2 135884153 . T . PASS END=135884226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,132,255:40,0 chr2 135887565 . G . PASS END=135887657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,145,255:40,0 chr2 135888122 . A . PASS END=135888291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:30:0,81,1215:0,90,255:40,0 chr2 135890463 . A . PASS END=135890463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 135890465 . T . PASS END=135890555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,108,1620:0,138,255:40,0 chr2 135891431 . A . PASS END=135891433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr2 135891434 . C . PASS END=135891438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:13,0 chr2 135891439 . C . PASS END=135891445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:18,0 chr2 135891446 . T . PASS END=135891446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr2 135891447 . T . PASS END=135891449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 135891450 . A . PASS END=135891587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1135:0,81,255:40,0 chr2 135891588 . A . PASS END=135891591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:36:0,75,1125:0,97,255:25,0 chr2 135891592 . T . PASS END=135891592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1086:0,55,255:23,0 chr2 135891593 . C . PASS END=135891598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1035:0,83,255:26,0 chr2 135891599 . C . PASS END=135891599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1066:0,46,255:23,0 chr2 135891600 . C . PASS END=135891603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,70,255:24,0 chr2 135892835 . A . PASS END=135892889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,157,255:40,0 chr2 135893133 . G . PASS END=135893489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:33:0,83,1224:0,83,255:40,0 chr2 135893490 . T . PASS END=135893502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,81,255:26,0 chr2 135907936 . C . PASS END=135907936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1311:0,105,255:35,0 chr2 135907939 . G . PASS END=135908076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:36:0,84,1260:0,95,255:40,0 chr2 135911219 . G . PASS END=135911225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:19,0 chr2 135911226 . A . PASS END=135911235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,693:0,60,255:23,0 chr2 135911236 . C . PASS END=135911236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 135911237 . T . PASS END=135911254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,817:0,61,255:26,0 chr2 135911255 . A . PASS END=135911266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,978:0,81,255:32,0 chr2 135911267 . C . PASS END=135911267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,963:0,41,255:29,0 chr2 135911268 . C . PASS END=135911290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:35:0,80,1256:0,80,255:40,0 chr2 135911291 . G . PASS END=135911291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1218:0,67,255:38,0 chr2 135911292 . T . PASS END=135911421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:36:0,81,1215:0,84,255:40,0 chr2 135911422 . T . PASS END=135911429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:30:0,75,1125:0,90,255:26,0 chr2 135911430 . C . PASS END=135911437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,988:0,84,255:28,0 chr2 135911438 . G . PASS END=135911446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:26,0 chr2 135920030 . T . PASS END=135920030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 135920031 . T . PASS END=135920049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,980:0,84,255:31,0 chr2 135920050 . T . PASS END=135920050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 135920051 . T . PASS END=135920068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:32:0,96,1174:0,96,255:34,0 chr2 135920069 . C . PASS END=135920069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1137:0,71,255:32,0 chr2 135920070 . T . PASS END=135920187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1166:0,82,255:38,0 chr2 135920188 . A . PASS END=135920188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:26,0 chr2 135920189 . T . PASS END=135920189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 135920190 . T . PASS END=135920196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,77,255:26,0 chr2 135920197 . G . PASS END=135920221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:34:0,88,1189:0,88,255:40,0 chr2 135920318 . A . PASS END=135920421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:70:0,120,1800:0,190,255:40,0 chr2 135920556 . G . PASS END=135920671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,143,255:40,0 chr2 135922164 . G . PASS END=135922177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1053:0,88,255:35,0 chr2 135922178 . T . PASS END=135922178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:31,0 chr2 135922179 . G . PASS END=135922252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:91:36:0,91,1039:0,91,255:40,0 chr2 135922253 . T . PASS END=135922256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:25,0 chr2 135922257 . T . PASS END=135922257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1078:0,41,255:23,0 chr2 135922258 . G . PASS END=135922261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:31:0,69,1035:0,77,255:23,0 chr2 135922262 . A . PASS END=135922266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:29:0,48,720:0,87,255:19,0 chr2 135922656 . T . PASS END=135922724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:59:0,120,1800:0,151,255:40,0 chr2 135925263 . C . PASS END=135925283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:89:0,120,1800:0,227,255:40,0 chr2 135926115 . G . PASS END=135926120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:18,0 chr2 135926121 . G . PASS END=135926130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,892:0,61,255:25,0 chr2 135926131 . C . PASS END=135926140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1054:0,84,255:30,0 chr2 135926141 . G . PASS END=135926141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 135926142 . G . PASS END=135926351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:34:0,89,1233:0,89,255:40,0 chr2 135926525 . T . PASS END=135926525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 135926552 . T . PASS END=135926552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 135926603 . T . LowGQ END=135926603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,496:1,0,255:14,1 chr2 135926606 . T . PASS END=135926606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,441:0,1,255:13,0 chr2 135926634 . C . PASS END=135926634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 135926675 . T . PASS END=135926675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 135926697 . G . PASS END=135926697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 135926858 . A . PASS END=135926858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 135926898 . A . PASS END=135926898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 135926908 . T . PASS END=135926908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 135926998 . T . PASS END=135926998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 135927173 . T . PASS END=135927173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,132,255:40,0 chr2 135927304 . T . PASS END=135927329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:88:0,120,1800:0,248,255:40,0 chr2 135927407 . G . PASS END=135927407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 135927458 . A . PASS END=135927458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 135927544 . TA T,TAA,TAAA, 0.01 DRAGENIndelHardQUAL DP=21;MQ=249.40;MQRankSum=2.574;ReadPosRankSum=-1.604;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:14,3,3,1,0:0.143,0.143,0.048,0.000:21:7,1,3,1,0:7,2,0,0,0:25:0,17,64,21,69,68,38,108,136,85,236,236,236,236,236:205,0,255:15,11:1.4572e-02,2.6133e+01,7.6133e+01,3.0480e+01,8.6734e+01,8.0480e+01,4.7456e+01,1.2628e+02,1.5449e+02,9.7456e+01,2.7126e+02,2.8026e+02,2.8026e+02,2.8026e+02,2.7427e+02:0.00,9.00,12.01,9.00,18.00,12.01,9.00,18.00,18.00,12.01,34.77,43.77,43.77,43.77,37.78:2,12,4,3:7,7,4,3 chr2 135927560 . T . PASS END=135927560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 135927563 . A . PASS END=135927563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 135927598 . T . PASS END=135927598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:22,0 chr2 135927623 . T . PASS END=135927623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:19,0 chr2 135927748 . C . PASS END=135927748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 135927862 . G . PASS END=135927862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:23,0 chr2 135927885 . G . LowGQ END=135927885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,692:14,0,255:23,0 chr2 135927894 . T . PASS END=135927894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 135927962 . A . PASS END=135927962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1192:0,83,255:29,0 chr2 135928044 . G . PASS END=135928044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 135928115 . C . PASS END=135928115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr2 135928249 . G . PASS END=135928249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 135932897 . C . PASS END=135932903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,568:0,48,255:19,0 chr2 135932904 . G . PASS END=135932904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 135932905 . G . PASS END=135932906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 135932907 . G . PASS END=135932939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,806:0,63,255:26,0 chr2 135932940 . C . PASS END=135932940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:25,0 chr2 135932941 . A . PASS END=135932941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 135932942 . T . PASS END=135932942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 135932943 . A . PASS END=135932943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 135932944 . G . PASS END=135932944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 135932945 . A . PASS END=135932958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr2 135932959 . G . PASS END=135932959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,908:0,29,255:25,1 chr2 135932960 . A . PASS END=135932961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1004:0,46,255:27,1 chr2 135932962 . A . PASS END=135932967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr2 135932968 . A . PASS END=135932968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 135932969 . C . PASS END=135933008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1186:0,83,255:33,0 chr2 135933009 . A . PASS END=135933038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 135933039 . T . PASS END=135933039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 135933040 . G . PASS END=135933047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 135933048 . C . PASS END=135933057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:18,0 chr2 135957912 . T . PASS END=135958010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:49:0,120,1800:0,121,255:40,0 chr2 135960402 . C . PASS END=135960412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr2 135960413 . A . PASS END=135960413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:23,0 chr2 135960414 . G . PASS END=135960414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 135960415 . A . PASS END=135960533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1033:0,82,255:40,0 chr2 135965004 . C . PASS END=135965007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1166:0,99,255:38,0 chr2 135965008 . T . PASS END=135965008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1210:0,64,255:35,0 chr2 135965009 . C . PASS END=135965356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,105,1421:0,105,255:40,0 chr2 135965357 . C . PASS END=135965368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:75:28:0,75,1125:0,84,255:26,0 chr2 135965369 . T . PASS END=135965371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 135965372 . G . PASS END=135965406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,846:0,68,255:25,0 chr2 135966438 . T . PASS END=135966548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:90:41:0,90,1434:0,90,255:40,0 chr2 135975035 . C . PASS END=135975174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:35:0,89,1175:0,89,255:40,0 chr2 135975175 . A . PASS END=135975175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1103:0,75,255:31,0 chr2 135975176 . A . PASS END=135975177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 135976647 . C . PASS END=135976748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:53:0,120,1800:0,143,255:40,0 chr2 135981996 . C . PASS END=135982087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,126,255:40,0 chr2 135985382 . C . PASS END=135985585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:39:0,93,1395:0,93,255:40,0 chr2 135988083 . C . PASS END=135988089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,884:0,72,255:24,0 chr2 135988090 . G . PASS END=135988092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:29,0 chr2 135988093 . T . PASS END=135988093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 135988094 . T . PASS END=135988099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr2 135988100 . G . PASS END=135988100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 135988101 . T . PASS END=135988111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr2 135988112 . T . PASS END=135988112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:28,0 chr2 135988113 . C . PASS END=135988438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:30:0,82,1066:0,82,255:40,0 chr2 135988439 . C . PASS END=135988439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1390:0,49,255:36,3 chr2 135988440 . T . PASS END=135988440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:21:43:0,21,1360:0,21,255:37,2 chr2 135988441 . T . PASS END=135988497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1274:0,84,255:40,1 chr2 136023104 . G . PASS END=136023246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:32:0,81,1215:0,96,255:40,0 chr2 136023247 . T . PASS END=136023256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,79,255:26,0 chr2 136026532 . C . PASS END=136026711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:81:27:0,81,1002:0,81,255:40,0 chr2 136028885 . C . PASS END=136028958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:34:0,96,1250:0,96,255:40,0 chr2 136028959 . A . PASS END=136028959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1496:0,77,255:34,0 chr2 136028960 . C . PASS END=136028965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:38:0,83,1351:0,83,255:35,0 chr2 136029338 . C . PASS END=136029435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1013:0,84,255:40,0 chr2 136029436 . C . PASS END=136029453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,65,255:26,0 chr2 136029454 . G . PASS END=136029457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 136033206 . C . PASS END=136033321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:32:0,81,1215:0,89,255:40,0 chr2 136033322 . C . PASS END=136033325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 136071059 . C . PASS END=136071172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1196:0,98,255:40,0 chr2 136071173 . T . PASS END=136071175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:33:0,68,1141:0,68,255:26,0 chr2 136072929 . C . PASS END=136073097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:86:34:0,86,1225:0,86,255:40,0 chr2 136073098 . T . PASS END=136073098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1402:0,79,255:35,0 chr2 136073099 . A . PASS END=136073100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,113,1503:0,113,255:39,0 chr2 136103120 . C . PASS END=136103205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,126,255:40,0 chr2 136107554 . C . PASS END=136107555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:25,0 chr2 136107556 . C . PASS END=136107785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1133:0,80,255:40,0 chr2 136111020 . C . PASS END=136111031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:32,0 chr2 136111032 . T . PASS END=136111032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr2 136111033 . T . PASS END=136111118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:32:0,87,1172:0,87,255:40,2 chr2 136111119 . G . PASS END=136111119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1606:0,69,255:40,2 chr2 136111120 . G . PASS END=136111161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:34:0,90,1350:0,97,255:40,0 chr2 136111162 . T . PASS END=136111162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:30,0 chr2 136111163 . A . PASS END=136111182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1187:0,86,255:33,0 chr2 136111183 . T . PASS END=136111193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,81,255:24,0 chr2 136111194 . C . PASS END=136111198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 136148372 . T . PASS END=136148390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:108:0,120,1800:0,248,255:40,0 chr2 136261899 . C . PASS END=136261918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:40:0,90,1390:0,90,255:40,2 chr2 136261919 . A . PASS END=136261919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:64:50:0,64,1668:0,64,255:40,2 chr2 136261920 . A . PASS END=136262059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:38:0,87,1305:0,92,255:40,0 chr2 136360144 . A . PASS END=136360278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:39:0,87,1305:0,101,255:40,0 chr2 136362376 . G . PASS END=136362390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:75:0,120,1800:0,212,255:40,0 chr2 136362416 . A . PASS END=136362586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,3:86:87:34:0,87,1278:0,89,255:40,0 chr2 136373722 . C . PASS END=136373763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,149,255:40,0 chr2 136374238 . T . PASS END=136374247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1039:0,84,255:31,0 chr2 136374248 . A . PASS END=136374248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1025:0,62,255:30,0 chr2 136374249 . G . PASS END=136374327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:88:34:0,88,1197:0,88,255:40,0 chr2 136379064 . G . PASS END=136379178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,149,255:40,0 chr2 136380224 . A . PASS END=136380302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:73:0,120,1800:0,183,255:40,0 chr2 136389288 . G . PASS END=136389347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:78:0,120,1800:0,208,255:40,0 chr2 136389431 . G . PASS END=136389571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:46:0,120,1800:0,128,255:40,0 chr2 136391340 . A . PASS END=136391398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:57:0,120,1800:0,154,255:40,0 chr2 136393460 . A . PASS END=136393568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:63:0,120,1800:0,162,255:40,0 chr2 136393658 . A . PASS END=136393753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:75:0,120,1800:0,160,255:40,2 chr2 136396188 . T . PASS END=136396225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:67:0,120,1800:0,193,255:40,0 chr2 136396303 . C . PASS END=136396359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:58:0,120,1800:0,139,255:40,0 chr2 136396466 . A . PASS END=136396692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:80:32:0,80,1117:0,80,255:40,0 chr2 136399106 . G . PASS END=136399115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:26,0 chr2 136399116 . T . PASS END=136399331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:29:0,81,1080:0,87,255:40,0 chr2 136399332 . T . PASS END=136399334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:21,0 chr2 136399335 . C . PASS END=136399335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:20,0 chr2 136399336 . A . PASS END=136399336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr2 136399337 . G . PASS END=136399352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr2 136399353 . A . PASS END=136399360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:14:0,37,442:0,37,255:13,0 chr2 136402949 . G . PASS END=136403097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:30:0,90,1103:0,90,255:40,0 chr2 136407472 . C . PASS END=136407478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1172:0,99,255:38,0 chr2 136407479 . A G, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.310;ReadPosRankSum=3.085;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,21,0:0.538,0.000:39:7,12,0:11,9,0:48:85,0,49,751,644,1395:255,0,255:16,0:5.0000e+01,6.7822e-05,5.2493e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,14,11,10:13,5,12,9 chr2 136407480 . T . PASS END=136407516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:39:0,93,1545:0,93,255:40,0 chr2 136407517 . A . PASS END=136407568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:38:0,87,1305:0,114,255:40,0 chr2 136407569 . C . PASS END=136407573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:25,0 chr2 136409300 . C . PASS END=136409301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:25,0 chr2 136409302 . G . PASS END=136409466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:32:0,89,1263:0,89,255:40,0 chr2 136409467 . G . PASS END=136409470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:43:0,63,1294:0,63,255:38,2 chr2 136409471 . C . PASS END=136409508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:34:0,91,1193:0,91,255:40,0 chr2 136409509 . G . PASS END=136409509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1176:0,58,255:30,0 chr2 136409510 . C . PASS END=136409538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1169:0,80,255:35,0 chr2 136409539 . T . PASS END=136409539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr2 136409540 . G . PASS END=136409545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 136409546 . C . PASS END=136409546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 136409547 . C . PASS END=136409547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 136409548 . T . PASS END=136409584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:26,0 chr2 136409585 . C . PASS END=136409585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 136409586 . A . PASS END=136409586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 136409587 . G . PASS END=136409602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 136418840 . A . PASS END=136418963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1215:0,96,255:40,0 chr2 136432902 . G . PASS END=136433053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:37:0,84,1260:0,97,255:40,0 chr2 136433054 . C . PASS END=136433056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 136437743 . G . PASS END=136437894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:38:0,87,1388:0,87,255:40,0 chr2 136467003 . C . PASS END=136467106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:45:0,84,1260:0,135,255:40,0 chr2 136467629 . C . PASS END=136467640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:18,0 chr2 136467641 . C . PASS END=136467641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:17,0 chr2 136467642 . G . PASS END=136467648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 136467649 . G . PASS END=136467650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 136467651 . T . PASS END=136467651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,1 chr2 136467652 . G . PASS END=136467652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:21,0 chr2 136467653 . G . PASS END=136467673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,892:0,69,255:26,0 chr2 136467674 . T . PASS END=136467767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1100:0,87,255:40,0 chr2 136467768 . T . PASS END=136467768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:26,0 chr2 136467769 . G . PASS END=136467769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:26,0 chr2 136467770 . T . PASS END=136467779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,900:0,84,255:26,0 chr2 136467780 . C . PASS END=136467780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:20,0 chr2 136467781 . A . PASS END=136467781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 136467782 . G . PASS END=136467789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:28:0,45,675:0,45,255:21,0 chr2 136467790 . A . PASS END=136467790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,889:0,12,255:14,0 chr2 136467791 . A . PASS END=136467791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:15,0 chr2 136467792 . T . PASS END=136467792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,692:0,14,255:13,0 chr2 136467793 . A . PASS END=136467794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:14,0 chr2 136467795 . T . PASS END=136467798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:14,0 chr2 136467799 . C . PASS END=136467799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 136467800 . A . PASS END=136467801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 136473120 . C . PASS END=136473264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:33:0,93,1395:0,99,255:40,0 chr2 136479494 . G . PASS END=136479576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,90,255:40,0 chr2 136480039 . G . PASS END=136480041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 136480042 . C . PASS END=136480123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1133:0,80,255:38,0 chr2 136481507 . T . PASS END=136481511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,449:0,36,255:13,0 chr2 136481512 . G . PASS END=136481512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 136481513 . G . PASS END=136481513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 136481514 . G . PASS END=136481518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 136481519 . T . PASS END=136481519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 136481520 . C . PASS END=136481529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:15,0 chr2 136481530 . A . PASS END=136481530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 136481531 . C . PASS END=136481537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:17,0 chr2 136481538 . A . PASS END=136481539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 136481540 . C . PASS END=136481540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 136481541 . A . PASS END=136481548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 136481549 . T . PASS END=136481549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr2 136481550 . A . PASS END=136481559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr2 136481560 . G . PASS END=136481560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 136481561 . A . PASS END=136481565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 136481566 . G . PASS END=136481566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr2 136481567 . A . PASS END=136481574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 136481575 . T . PASS END=136481575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,815:0,41,255:23,0 chr2 136481576 . T . PASS END=136481609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,803:0,68,255:23,0 chr2 136481610 . G . PASS END=136481610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 136481611 . T . PASS END=136481642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,809:0,69,255:25,0 chr2 136481643 . T . PASS END=136481643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 136481644 . C . PASS END=136481666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr2 136481667 . G . PASS END=136481670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 136481671 . A . PASS END=136481671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 136481672 . A . PASS END=136481673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 136481674 . A . PASS END=136481674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 136481675 . C . PASS END=136481734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:33:0,90,1108:0,91,255:40,0 chr2 136481735 . C . PASS END=136481735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1562:0,78,255:40,0 chr2 136481736 . A . PASS END=136481862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,109,1792:0,109,255:40,0 chr2 136499500 . A . PASS END=136499507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr2 136499508 . G . PASS END=136499529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,999:0,81,255:30,0 chr2 136499530 . G . PASS END=136499530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 136499531 . C . PASS END=136499535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr2 136499536 . G . PASS END=136499536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1023:0,51,255:28,0 chr2 136499537 . C . PASS END=136499544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1148:0,90,255:31,0 chr2 136499545 . A . PASS END=136499545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 136499546 . A . PASS END=136499562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1036:0,93,255:31,0 chr2 136499563 . T . PASS END=136499563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:29,0 chr2 136499564 . T . PASS END=136499581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:31,0 chr2 136499778 . T . PASS END=136499807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr2 136499808 . C . PASS END=136499822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 136499823 . C . PASS END=136499824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 136499825 . G . PASS END=136499825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 136499826 . T . PASS END=136499826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 136499827 . G . PASS END=136499845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 136499846 . C . PASS END=136499848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 136499849 . G . PASS END=136499875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 136499876 . T . PASS END=136499879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 136499880 . T . PASS END=136499880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 136499881 . T . LowGQ END=136499881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:13,0,255:11,0 chr2 136499882 . T . PASS END=136499882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 136499883 . G . PASS END=136499891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 136499892 . T . PASS END=136499892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 136499893 . G . PASS END=136499909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 136499910 . T . PASS END=136499910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 136499911 . G . PASS END=136499913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 136499914 . T . PASS END=136499914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,480:0,31,255:13,0 chr2 136499915 . C . PASS END=136499922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 136499923 . A . PASS END=136499924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr2 136499925 . C . PASS END=136499925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 136499926 . C . PASS END=136499926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,488:0,14,255:13,0 chr2 136499927 . G . PASS END=136499931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 136499932 . G . PASS END=136499934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 136499935 . G . PASS END=136499939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 136499940 . C . PASS END=136499940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 136499941 . G . PASS END=136499955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:19,0 chr2 136499956 . C . PASS END=136499959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 136499960 . A . PASS END=136499978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr2 136499979 . A . PASS END=136499979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:16,0 chr2 136499980 . A . PASS END=136499990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,601:0,43,255:18,0 chr2 136499991 . T . PASS END=136499991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,512:0,21,255:16,0 chr2 136499992 . C . PASS END=136499994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,548:0,54,255:19,0 chr2 136499995 . G . PASS END=136499995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr2 136499996 . G . PASS END=136499996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 136499997 . C . LowGQ END=136499997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,449:21,0,255:16,0 chr2 136499998 . G . PASS END=136500002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,504:0,43,255:19,0 chr2 136500003 . A . PASS END=136500003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,550:0,27,255:18,0 chr2 136500004 . C . PASS END=136500004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,634:0,60,255:20,0 chr2 136500005 . G . PASS END=136500006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,562:0,43,255:19,0 chr2 136500007 . G . PASS END=136500009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 136500010 . C . PASS END=136500010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 136500011 . A . PASS END=136500011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 136500012 . G . PASS END=136500012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,643:0,19,255:19,0 chr2 136500013 . C . PASS END=136500013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:23,0 chr2 136500014 . A . PASS END=136500014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,878:0,61,255:23,0 chr2 136500015 . G . PASS END=136500015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,748:0,45,255:22,0 chr2 136500016 . G . PASS END=136500016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 136500017 . C . PASS END=136500017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,864:0,39,255:23,0 chr2 136500018 . C . PASS END=136500019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 136500020 . C . PASS END=136500020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,886:0,39,255:23,0 chr2 136500021 . A . PASS END=136500028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,787:0,61,255:23,0 chr2 136500029 . A . PASS END=136500029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,767:0,28,255:19,0 chr2 136500030 . G . PASS END=136500034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:23,0 chr2 136500035 . G . PASS END=136500035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,776:0,42,255:20,0 chr2 136500036 . C . PASS END=136500036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 136500037 . T . PASS END=136500038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:25:0,45,793:0,45,255:22,0 chr2 136500039 . G . PASS END=136500040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,906:0,62,255:24,0 chr2 136500041 . C . PASS END=136500041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,807:0,23,255:24,0 chr2 136500042 . G . PASS END=136500046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:24,0 chr2 136500047 . G . PASS END=136500048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:27:0,45,844:0,45,255:24,0 chr2 136500049 . G . PASS END=136500049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:23,0 chr2 136500050 . C . PASS END=136500050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,886:0,29,255:24,0 chr2 136500051 . C . PASS END=136500055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:28:0,63,903:0,63,255:28,0 chr2 136500056 . C . PASS END=136500058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 136500059 . T . PASS END=136500060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1039:0,63,255:29,0 chr2 136500061 . C . PASS END=136500065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 136500066 . C . PASS END=136500066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1052:0,79,255:28,0 chr2 136500067 . C . PASS END=136500067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 136500068 . A . PASS END=136500068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:28,0 chr2 136500069 . G . PASS END=136500070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,1 chr2 136500071 . C . PASS END=136500071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr2 136500072 . C . PASS END=136500072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 136500073 . C . PASS END=136500074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 136500075 . C . PASS END=136500075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 136500076 . G . PASS END=136500082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:31,0 chr2 136500083 . T . PASS END=136500083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1052:0,68,255:30,0 chr2 136500084 . C . PASS END=136500088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 136500089 . T . PASS END=136500089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:31,0 chr2 136500090 . G . PASS END=136500100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1140:0,85,255:31,0 chr2 136500101 . C . PASS END=136500101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 136500102 . T . PASS END=136500103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:31,0 chr2 136500104 . T . PASS END=136500104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:28,0 chr2 136500105 . C . PASS END=136500113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:30,0 chr2 136500114 . C . PASS END=136500115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 136500116 . C . PASS END=136500128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:28,0 chr2 136500129 . T . PASS END=136500129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 136500130 . T . PASS END=136500138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 136500139 . G . PASS END=136500139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 136500140 . T . PASS END=136500140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 136500141 . T . PASS END=136500141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 136500142 . T . PASS END=136500143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 136500144 . G . PASS END=136500148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr2 136500149 . T . PASS END=136500149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136500150 . G . PASS END=136500188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,923:0,64,255:26,0 chr2 136500189 . A . PASS END=136500189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,880:0,50,255:25,0 chr2 136500190 . G . PASS END=136500193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:25,0 chr2 136500194 . G . PASS END=136500197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,65,255:19,0 chr2 136500198 . G . PASS END=136500202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:20,0 chr2 136500203 . T . PASS END=136500236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,49,255:19,0 chr2 136505837 . G . PASS END=136505939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:40:0,120,1498:0,120,255:40,2 chr2 136511109 . T . PASS END=136511197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:91:36:0,91,1243:0,91,255:40,0 chr2 136511729 . A . PASS END=136511847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:38:0,89,1327:0,89,255:40,0 chr2 136513087 . A . PASS END=136513261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:38:0,96,1485:0,96,255:40,0 chr2 136519388 . G . PASS END=136519388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 136519389 . A . PASS END=136519389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 136519390 . G . PASS END=136519481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1215:0,85,255:40,0 chr2 136527339 . A . PASS END=136527364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:96:0,120,1800:0,140,255:40,1 chr2 136527365 . G . PASS END=136527393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:102:0,120,1800:0,139,255:40,0 chr2 136528141 . A . PASS END=136528305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:53:0,120,1800:0,127,255:40,0 chr2 136529990 . G . PASS END=136529993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr2 136529994 . G . PASS END=136530117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:80:32:0,80,1155:0,80,255:40,0 chr2 136533819 . C . PASS END=136533921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,140,255:40,0 chr2 136536518 . A . PASS END=136536519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,108,1299:0,108,255:40,0 chr2 136536520 . T . PASS END=136536520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1421:0,79,255:40,0 chr2 136536521 . G . PASS END=136536646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,99,1485:0,120,255:40,0 chr2 136536647 . C . PASS END=136536647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:33,0 chr2 136536648 . C . PASS END=136536649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:32,0 chr2 136537753 . G . PASS END=136537753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:28,0 chr2 136537754 . C . PASS END=136537928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:30:0,90,1141:0,90,255:40,0 chr2 136537929 . T . PASS END=136537929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:28,0 chr2 136537930 . G . PASS END=136537936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,102,255:30,0 chr2 136537937 . C . PASS END=136537955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:26,0 chr2 136540319 . G . PASS END=136540457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:47:0,102,1530:0,120,255:40,0 chr2 136545569 . C . PASS END=136545569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 136545619 . T . PASS END=136545619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 136545643 . C . PASS END=136545643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 136545655 . G . PASS END=136545655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 136545664 . A . PASS END=136545664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 136545701 . G . PASS END=136545701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 136545884 . T . PASS END=136545884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 136545894 . T . PASS END=136545926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1094:0,83,255:32,0 chr2 136545927 . G . PASS END=136545927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:30,0 chr2 136545928 . C . PASS END=136545930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:30,0 chr2 136545931 . C . PASS END=136545931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:29,0 chr2 136545932 . G . PASS END=136545936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr2 136545937 . G . PASS END=136545937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:29,2 chr2 136545938 . T . PASS END=136545938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1111:0,36,255:29,2 chr2 136545939 . T . PASS END=136545939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:30,0 chr2 136545940 . T . PASS END=136546072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:31:0,85,1158:0,85,255:40,0 chr2 136546073 . G . PASS END=136546077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:32,0 chr2 136546078 . T . PASS END=136546078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:29,0 chr2 136546079 . C . PASS END=136546093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1117:0,80,255:30,0 chr2 136546094 . G . PASS END=136546094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 136546095 . G . PASS END=136546096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 136546097 . T . PASS END=136546097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 136546098 . G . PASS END=136546100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 136546101 . G . PASS END=136546107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 136546108 . C . PASS END=136546109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:27:0,54,810:0,81,255:18,0 chr2 136546110 . A G, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,12,0:0,14,0:75:163,78,0,1008,78,1008:255,81,0:0,0:1.2525e+02,7.5253e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,18:0,0,14,12 chr2 136546111 . G . PASS END=136546114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,65,255:18,0 chr2 136547134 . A . PASS END=136547134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 136547141 . C . PASS END=136547142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 136547143 . G . PASS END=136547249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1016:0,81,255:38,0 chr2 136547250 . A . PASS END=136547251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1170:0,64,255:26,0 chr2 136547252 . G . PASS END=136547255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:33:0,84,1260:0,91,255:29,0 chr2 136547256 . A . PASS END=136547256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:26,0 chr2 136547257 . C . PASS END=136547282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,980:0,80,255:32,0 chr2 136547283 . T . PASS END=136547283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,995:0,63,255:30,0 chr2 136547284 . C . PASS END=136547284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr2 136547285 . T . PASS END=136547285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1090:0,63,255:29,0 chr2 136547286 . C . PASS END=136547336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:33,0 chr2 136547337 . G . PASS END=136547337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 136547338 . T . PASS END=136547338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,970:0,56,255:24,0 chr2 136547339 . A . PASS END=136547347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr2 136547348 . G . PASS END=136547355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:45:27:0,45,675:0,65,255:16,0 chr2 136547356 . T . PASS END=136547366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:30:19:0,30,450:0,57,255:12,0 chr2 136547367 . A . PASS END=136547367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 136547368 . G . PASS END=136547368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 136548223 . C . PASS END=136548223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 136548228 . C . PASS END=136548229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr2 136548230 . T . PASS END=136548451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:41:0,84,1385:0,84,255:40,0 chr2 136548495 . T . PASS END=136548504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,115,1800:0,115,255:40,0 chr2 136552211 . C . PASS END=136552345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:82:39:0,82,1410:0,82,255:40,0 chr2 136555599 . C . PASS END=136555621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:37:0,98,1279:0,98,255:40,0 chr2 136555622 . C . PASS END=136555658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,102,1560:0,102,255:40,0 chr2 136555659 . T C, 181.03 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,21,0:0,24,0:131:219,134,0,319,319,319:255,135,0:0,0:1.8103e+02,1.3103e+02,0.0000e+00,3.1580e+02,3.5057e+02,3.1881e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,23:0,0,22,23 chr2 136555660 . T . PASS END=136555695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:40:0,90,1423:0,90,255:40,0 chr2 136555696 . A . PASS END=136555696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr2 136555697 . G . PASS END=136555707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:95:35:0,95,1327:0,95,255:34,0 chr2 136555708 . A . PASS END=136555708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:30,0 chr2 136558177 . C . PASS END=136558193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,717:0,63,255:22,0 chr2 136558194 . C . PASS END=136558194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 136558195 . T . PASS END=136558195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 136558196 . G . PASS END=136558196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 136558197 . C . PASS END=136558205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,886:0,62,255:27,0 chr2 136558206 . C . PASS END=136558215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr2 136558216 . A . PASS END=136558216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 136558217 . G . PASS END=136558219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 136558220 . G . PASS END=136558220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 136558221 . G . PASS END=136558226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:31,0 chr2 136558227 . T . PASS END=136558227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1068:0,63,255:29,0 chr2 136558228 . G . PASS END=136558266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:32:0,87,1294:0,87,255:39,0 chr2 136558267 . G . PASS END=136558267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1342:0,78,255:36,0 chr2 136558268 . C . PASS END=136558360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,89,255:38,0 chr2 136558361 . C . PASS END=136558374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:25:0,60,914:0,60,255:26,0 chr2 136558375 . G . PASS END=136558376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:19,0 chr2 136558377 . C . PASS END=136558379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 136558389 . T . PASS END=136558389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 136561500 . C . PASS END=136561505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 136561506 . C . PASS END=136561519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:34,0 chr2 136561520 . C . PASS END=136561556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:34:0,102,1296:0,102,255:40,0 chr2 136561557 . G A, 206.04 PASS DP=53;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,30,0:0,23,0:156:244,159,0,1999,159,1999:255,159,0:0,0:2.0604e+02,1.5604e+02,0.0000e+00,4.5000e+02,1.9081e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,24:0,0,28,25 chr2 136561558 . C . PASS END=136561594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,149,255:40,0 chr2 136561595 . A . PASS END=136561671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:39:0,84,1260:0,105,255:40,0 chr2 136561672 . T . PASS END=136561672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:27,0 chr2 136561673 . G . PASS END=136561687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 136561688 . T . PASS END=136561698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 136562337 . C . PASS END=136562345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 136562346 . G . PASS END=136562346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:10,0 chr2 136562347 . A . PASS END=136562347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 136562348 . T . LowGQ END=136562348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:10,0 chr2 136562349 . G . PASS END=136562364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,394:0,33,255:12,0 chr2 136562365 . G . PASS END=136562367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 136562368 . T . PASS END=136562368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 136562369 . C . PASS END=136562377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:19,0 chr2 136562378 . T . PASS END=136562382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,746:0,60,255:21,0 chr2 136562383 . T . PASS END=136562383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 136562384 . A . PASS END=136562391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 136562392 . A . PASS END=136562392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 136562393 . G . PASS END=136562405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:22:0,62,831:0,62,255:25,0 chr2 136562406 . G . PASS END=136562416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr2 136562417 . T . PASS END=136562419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 136562420 . T . PASS END=136562453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1096:0,80,255:32,0 chr2 136562454 . A G, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.863;ReadPosRankSum=3.344;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,18,0:0.545,0.000:33:10,13,0:5,5,0:48:85,0,49,615,522,1138:255,0,255:14,0:5.0000e+01,6.8081e-05,5.2481e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,3,12,6:9,6,11,7 chr2 136562455 . A . PASS END=136562455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 136562456 . A . PASS END=136562456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 136562457 . A . PASS END=136562470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:31:0,89,1302:0,89,255:36,0 chr2 136562471 . C . PASS END=136562471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr2 136562472 . G . PASS END=136562491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1293:0,111,255:37,0 chr2 136562492 . C . PASS END=136562627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1233:0,84,255:40,0 chr2 136564689 . A . PASS END=136564689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,576:0,51,255:17,0 chr2 136564693 . C . PASS END=136564693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 136564698 . C . PASS END=136564725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr2 136564726 . A . PASS END=136564726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 136564727 . T . PASS END=136564734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,914:0,66,255:25,0 chr2 136564735 . T . PASS END=136564735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 136564736 . C . PASS END=136564743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 136564744 . C . PASS END=136564785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:30,0 chr2 136564786 . T . PASS END=136564786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 136564787 . T . PASS END=136564796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1089:0,90,255:31,0 chr2 136564797 . G . PASS END=136564797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr2 136564798 . A . PASS END=136564867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,84,255:40,0 chr2 136564868 . A . PASS END=136564868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1541:0,77,255:39,0 chr2 136564869 . C . PASS END=136564943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:38:0,81,1215:0,83,255:40,0 chr2 136564944 . G . PASS END=136564953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:30:0,69,1035:0,90,255:25,0 chr2 136564954 . T . PASS END=136564954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:23,0 chr2 136564955 . C . PASS END=136564963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr2 136564964 . A . PASS END=136564964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 136564965 . G . PASS END=136564966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 136566013 . C . PASS END=136566014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 136566015 . T . PASS END=136566024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr2 136566025 . C . PASS END=136566025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 136566026 . A . PASS END=136566026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 136566027 . T . PASS END=136566027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:27,0 chr2 136566028 . T . PASS END=136566028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 136566029 . G . PASS END=136566037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1062:0,87,255:31,0 chr2 136566038 . T . PASS END=136566038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:30,0 chr2 136566039 . T . PASS END=136566154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:31:0,85,1141:0,85,255:40,0 chr2 136566155 . T . PASS END=136566155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1176:0,74,255:30,0 chr2 136566156 . C . PASS END=136566190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1078:0,83,255:33,0 chr2 136566191 . G . PASS END=136566195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1024:0,71,255:26,0 chr2 136566196 . G . PASS END=136566196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 136566197 . C . PASS END=136566204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 136566205 . G . PASS END=136566205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:25,0 chr2 136566206 . G . PASS END=136566207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:26,0 chr2 136566208 . C . PASS END=136566215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 136566216 . T . PASS END=136566218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 136566219 . G . PASS END=136566226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 136566227 . C . PASS END=136566228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,984:0,68,255:27,0 chr2 136566229 . G . PASS END=136566234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr2 136566235 . C . PASS END=136566235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 136566236 . T . PASS END=136566238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 136566239 . G . PASS END=136566239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 136566240 . T . PASS END=136566243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 136566244 . A . PASS END=136566244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 136566245 . G . PASS END=136566318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1111:0,80,255:39,0 chr2 136566319 . T . PASS END=136566319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1302:0,67,255:34,0 chr2 136566320 . C . PASS END=136566383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1202:0,83,255:38,0 chr2 136566384 . A . PASS END=136566384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 136566385 . G . PASS END=136566388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 136566389 . A . PASS END=136566399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr2 136566400 . C . PASS END=136566408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1166:0,93,255:32,0 chr2 136566409 . A . PASS END=136566409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr2 136566410 . C . PASS END=136566417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr2 136566418 . T . PASS END=136566460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,908:0,66,255:26,0 chr2 136566461 . G . PASS END=136566461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 136566462 . C . PASS END=136566463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 136566464 . C . PASS END=136566464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 136566465 . A . PASS END=136566470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 136566471 . A . PASS END=136566471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:22,0 chr2 136566472 . A . PASS END=136566479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,831:0,66,255:22,0 chr2 136566480 . A . PASS END=136566480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 136566481 . T . PASS END=136566489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,845:0,66,255:22,0 chr2 136566490 . C . PASS END=136566490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 136566491 . G . PASS END=136566528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,801:0,61,255:26,0 chr2 136566529 . C . PASS END=136566530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 136566531 . G . PASS END=136566531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 136566532 . C . PASS END=136566545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,66,255:19,0 chr2 136566546 . A . PASS END=136566546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr2 136566547 . G . PASS END=136566571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,621:0,51,255:19,0 chr2 136566572 . C . PASS END=136566585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 136566586 . T . PASS END=136566586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr2 136566587 . C . PASS END=136566588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 136566589 . C . PASS END=136566599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:53:20:0,53,810:0,53,255:19,0 chr2 136566600 . T . PASS END=136566669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,730:0,63,255:26,0 chr2 136566670 . C . PASS END=136566670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 136566671 . C . PASS END=136566685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 136566686 . C . PASS END=136566773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1055:0,80,255:37,0 chr2 136566774 . A . PASS END=136566774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1164:0,50,255:30,0 chr2 136566775 . A . PASS END=136566783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,98,255:33,0 chr2 136566784 . A . PASS END=136566784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1268:0,75,255:31,0 chr2 136566785 . G . PASS END=136567068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,81,255:40,0 chr2 136567069 . C . PASS END=136567069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:27,0 chr2 136567070 . T . PASS END=136567073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr2 136567074 . G . PASS END=136567074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:24,0 chr2 136567075 . T . PASS END=136567130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr2 136567131 . G . PASS END=136567132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136567133 . G . PASS END=136567133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:26,0 chr2 136567134 . C . PASS END=136567185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1017:0,83,255:35,0 chr2 136567186 . C . PASS END=136567186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 136567187 . G . PASS END=136567506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1251:0,81,255:40,0 chr2 136567507 . C . PASS END=136567507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:36,0 chr2 136567508 . A . PASS END=136567531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1241:0,86,255:35,0 chr2 136567532 . G . PASS END=136567532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 136567533 . G . PASS END=136567533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 136567534 . A . PASS END=136567535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr2 136567536 . C . PASS END=136567536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136567537 . G . PASS END=136567554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:27,0 chr2 136567555 . C . PASS END=136567555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:19,0 chr2 136567556 . C . PASS END=136567558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 136567559 . G . PASS END=136567563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:49:22:0,49,723:0,49,255:19,0 chr2 136569881 . C . PASS END=136569885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,944:0,84,255:32,0 chr2 136569886 . A . PASS END=136570222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1155:0,80,255:40,0 chr2 136570223 . T . PASS END=136570223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,993:0,52,255:29,0 chr2 136570224 . C . PASS END=136570327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:31:0,84,1178:0,86,255:37,0 chr2 136570328 . A . PASS END=136570328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:28,0 chr2 136570329 . G . PASS END=136570349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1070:0,87,255:31,0 chr2 136570350 . C . PASS END=136570385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,891:0,64,255:26,0 chr2 136570386 . G . PASS END=136570388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 136570389 . C . PASS END=136570389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 136570390 . T . PASS END=136570395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 136570396 . C . PASS END=136570425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr2 136570426 . G . PASS END=136570427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 136570428 . G . PASS END=136570429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 136570430 . T . PASS END=136570430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 136570431 . C . PASS END=136570432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 136570433 . G . PASS END=136570499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,647:0,53,255:19,0 chr2 136570500 . A . PASS END=136570500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 136570501 . T . PASS END=136570506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 136570507 . T . PASS END=136570507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 136570508 . T . PASS END=136570512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 136570513 . A . PASS END=136570523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,31,255:12,0 chr2 136570524 . C . PASS END=136570527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 136570528 . T . PASS END=136570529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 136574911 . C . PASS END=136574912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,953:0,62,255:23,0 chr2 136574913 . T . PASS END=136574914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136574915 . A . PASS END=136574915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 136574916 . A . PASS END=136574918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136574919 . A . PASS END=136574919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 136574920 . G . PASS END=136574939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:30:0,86,1119:0,86,255:34,0 chr2 136574940 . T . PASS END=136574940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:34,0 chr2 136574941 . G . PASS END=136574943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1360:0,111,255:37,0 chr2 136574944 . G . PASS END=136574944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:35,0 chr2 136574945 . G . PASS END=136575115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1172:0,83,255:40,0 chr2 136575116 . G . PASS END=136575136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,74,255:26,0 chr2 136575137 . G . PASS END=136575141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 136575142 . C . PASS END=136575159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr2 136575160 . A . PASS END=136575161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:28:0,54,810:0,84,255:19,0 chr2 136575162 . C . PASS END=136575191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,801:0,69,255:23,0 chr2 136575192 . A . PASS END=136575197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 136575198 . C . PASS END=136575198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 136575199 . G T, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,19,0:0,5,0:69:157,72,0,930,72,930:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,10:0,0,13,11 chr2 136575200 . C . PASS END=136575219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:25,0 chr2 136575220 . C . PASS END=136575225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 136575226 . C . PASS END=136575228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 136575229 . C . PASS END=136575229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 136575230 . A . PASS END=136575230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:26,0 chr2 136575231 . T . PASS END=136575231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 136575232 . G . PASS END=136575232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 136575233 . G . PASS END=136575233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 136575234 . G . PASS END=136575235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 136575236 . A . PASS END=136575236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 136575237 . A . PASS END=136575289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1004:0,80,255:32,0 chr2 136575290 . A . PASS END=136575290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:28,0 chr2 136575291 . G . PASS END=136575293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 136575294 . G . PASS END=136575294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 136575295 . G . PASS END=136575296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 136575297 . C . PASS END=136575299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr2 136575300 . C . PASS END=136575300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:24,0 chr2 136575301 . G . PASS END=136575309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,71,255:23,0 chr2 136575310 . T . PASS END=136575310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 136575311 . A . PASS END=136575333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:24,0 chr2 136575334 . C . PASS END=136575334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 136575335 . A . PASS END=136575335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 136575336 . C . PASS END=136575336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr2 136575337 . C . PASS END=136575345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 136575346 . C . PASS END=136575353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr2 136575354 . C . PASS END=136575359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 136575360 . T . PASS END=136575380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:17,0 chr2 136575381 . G . PASS END=136575381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 136575382 . A . PASS END=136575399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 136575400 . T . PASS END=136575400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,621:0,26,255:16,0 chr2 136575401 . C . PASS END=136575419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 136575420 . C . PASS END=136575476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:25,0 chr2 136575477 . T . PASS END=136575477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 136575478 . A . PASS END=136575496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,906:0,72,255:24,0 chr2 136575497 . C . PASS END=136575518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 136575519 . C . PASS END=136575519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 136575520 . A . PASS END=136575522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 136575523 . T . PASS END=136575525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 136575526 . T . PASS END=136575533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 136575534 . T C, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,15,0:0,10,0:72:160,75,0,956,75,956:255,75,0:0,0:1.2224e+02,7.2240e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,14:0,0,13,12 chr2 136575535 . T . PASS END=136575571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:19,0 chr2 136575572 . T . PASS END=136575590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr2 136575591 . C . PASS END=136575617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr2 136575618 . G . PASS END=136575618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 136575619 . A . PASS END=136575619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 136575620 . G . PASS END=136575631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,304:0,27,255:9,0 chr2 136579590 . C . PASS END=136579668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:63:0,120,1800:0,184,255:40,0 chr2 136581471 . C . PASS END=136581481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,848:0,61,255:26,0 chr2 136581482 . C . PASS END=136581573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1197:0,84,255:40,0 chr2 136587163 . C . PASS END=136587231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:87:56:0,87,1671:0,87,255:40,0 chr2 136587232 . G . PASS END=136587232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:68:56:0,68,1496:0,68,255:39,0 chr2 136587233 . A . PASS END=136587246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,141,255:40,0 chr2 136590681 . C . PASS END=136590688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 136590689 . G . PASS END=136590696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr2 136590697 . A . PASS END=136590697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 136590698 . T . PASS END=136590724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1092:0,87,255:30,0 chr2 136590725 . T . PASS END=136590725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:28,0 chr2 136590726 . A . PASS END=136590726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 136590727 . T . PASS END=136590727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 136590728 . C . PASS END=136590742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 136590743 . C . PASS END=136590752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 136590753 . T . PASS END=136590753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:25,0 chr2 136590754 . T . PASS END=136590760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 136594100 . C . PASS END=136594120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1399:0,87,255:40,0 chr2 136594121 . G . PASS END=136594157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:41:0,93,1382:0,93,255:40,0 chr2 136594158 . G A, 181.51 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,28,0:0,17,0:132:219,135,0,1654,135,1654:255,135,0:0,0:1.8151e+02,1.3151e+02,0.0000e+00,4.5000e+02,1.6628e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,21:0,0,29,16 chr2 136594159 . G . PASS END=136594195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:43:0,97,1621:0,97,255:40,0 chr2 136594196 . G . PASS END=136594387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:31:0,84,1103:0,84,255:40,0 chr2 136594388 . T . PASS END=136594388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:31,0 chr2 136594389 . G . PASS END=136594732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1316:0,81,255:40,0 chr2 136594733 . G . PASS END=136594733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:31,0 chr2 136594734 . C . PASS END=136594739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr2 136598405 . T . PASS END=136598521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,141,255:40,0 chr2 136602115 . A . PASS END=136602254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,131,255:40,0 chr2 136603807 . C . PASS END=136603807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 136603808 . T . PASS END=136603808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 136603809 . T . PASS END=136603812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 136603813 . C . PASS END=136603816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 136603817 . C . PASS END=136603817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 136603818 . T . PASS END=136603819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 136603820 . T . PASS END=136603821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 136603822 . T . PASS END=136603938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1033:0,82,255:40,0 chr2 136603939 . C . PASS END=136603950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:26,0 chr2 136603951 . T . PASS END=136603951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:22,0 chr2 136603952 . G . PASS END=136603952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 136603953 . T . PASS END=136603962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr2 136605623 . C . PASS END=136605758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:37:0,87,1285:0,90,255:40,0 chr2 136608643 . G . PASS END=136608643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 136608646 . G . PASS END=136608646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 136608651 . A . PASS END=136608651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 136608746 . C . PASS END=136608746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 136608972 . C . PASS END=136608973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 136608974 . C . PASS END=136608978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 136608979 . C . PASS END=136608979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr2 136608980 . A . PASS END=136609020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:29:0,86,1044:0,86,255:37,0 chr2 136609021 . C . PASS END=136609021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:37,0 chr2 136609022 . T . PASS END=136609107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1088:0,90,255:40,0 chr2 136609108 . A . PASS END=136609133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr2 136610357 . C . PASS END=136610485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:44:0,116,1619:0,116,255:40,0 chr2 136614298 . C . PASS END=136614453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:50:0,114,1710:0,126,255:40,0 chr2 136615467 . C . PASS END=136615574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:60:0,120,1800:0,150,255:40,0 chr2 136616871 . A . PASS END=136616872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1080:0,90,255:32,0 chr2 136616873 . T . PASS END=136616873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 136616874 . A . PASS END=136616908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1143:0,96,255:33,0 chr2 136616909 . A . PASS END=136616909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,906:0,65,255:30,0 chr2 136616910 . C . PASS END=136616917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1211:0,99,255:33,0 chr2 136616918 . A . PASS END=136616918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,999:0,68,255:31,0 chr2 136616919 . T . PASS END=136616961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1188:0,85,255:34,0 chr2 136616962 . G . PASS END=136616963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 136616964 . C . PASS END=136616971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,82,255:28,0 chr2 136616972 . C . PASS END=136616976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:21,0 chr2 136616977 . G . PASS END=136616991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:18:0,42,630:0,44,255:19,0 chr2 136616992 . G . PASS END=136616994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,37,255:12,0 chr2 136616995 . C . PASS END=136617000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 136617001 . T . PASS END=136617012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 136620177 . T . PASS END=136620294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:37:0,87,1277:0,95,255:40,0 chr2 136620295 . C . PASS END=136620318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:26,0 chr2 136622583 . C . PASS END=136622733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:30:0,87,1305:0,90,255:40,0 chr2 136623702 . C . PASS END=136623724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1103:0,85,255:34,0 chr2 136623725 . A . PASS END=136623725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:32,0 chr2 136623726 . G . PASS END=136623795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1106:0,80,255:38,0 chr2 136623796 . G . PASS END=136623821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:26,0 chr2 136623822 . A . PASS END=136623822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:20,0 chr2 136623823 . C . PASS END=136623827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 136623828 . A . PASS END=136623839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,660:0,46,255:19,0 chr2 136623840 . A . PASS END=136623840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:15,0 chr2 136623841 . C . PASS END=136623846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr2 136623847 . C . PASS END=136623847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:13,0 chr2 136624133 . C . PASS END=136624144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr2 136624145 . G . PASS END=136624145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 136624146 . C . PASS END=136624146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 136624147 . T . PASS END=136624152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 136624153 . A . PASS END=136624153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,615:0,46,255:19,0 chr2 136624154 . C . PASS END=136624169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 136624170 . C . PASS END=136624253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,972:0,81,255:38,0 chr2 136624254 . G . PASS END=136624254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr2 136624255 . A . PASS END=136624284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1186:0,83,255:33,0 chr2 136624285 . T . PASS END=136624285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:27,0 chr2 136624286 . C . PASS END=136624286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 136624287 . T . PASS END=136624298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,976:0,68,255:26,0 chr2 136626181 . C . PASS END=136626182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1181:0,88,255:35,0 chr2 136626183 . T . PASS END=136626183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1099:0,66,255:34,0 chr2 136626184 . T . PASS END=136626201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1147:0,89,255:36,0 chr2 136626202 . T . PASS END=136626202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:36,0 chr2 136626203 . G . PASS END=136626391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1260:0,93,255:40,0 chr2 136626392 . G . PASS END=136626392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr2 136626393 . T . PASS END=136626399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 136626400 . A . PASS END=136626400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,897:0,67,255:26,0 chr2 136626401 . C . PASS END=136626401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 136626402 . C . PASS END=136626402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 136626403 . A . PASS END=136626403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,943:0,51,255:24,0 chr2 136626404 . A . PASS END=136626419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 136626420 . G . PASS END=136626430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:22:0,51,765:0,66,255:18,0 chr2 136627821 . T . PASS END=136627919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:41:0,84,1260:0,90,255:40,0 chr2 136627920 . T . PASS END=136627920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 136627921 . A . PASS END=136627921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,120,255:27,0 chr2 136627922 . A . PASS END=136627928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:32:0,75,1125:0,80,255:26,0 chr2 136627929 . A . PASS END=136627929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,875:0,59,255:25,0 chr2 136627930 . C . PASS END=136627931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 136630267 . C . PASS END=136630413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:52:0,120,1800:0,121,255:40,0 chr2 136633829 . T . PASS END=136633833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 136633834 . C . PASS END=136633855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,507:0,42,255:15,0 chr2 136633856 . T . PASS END=136633861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 136633862 . T . PASS END=136633888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:16,0 chr2 136633889 . A . PASS END=136633927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,427:0,33,255:13,0 chr2 136633928 . A . PASS END=136633935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:8,0 chr2 136664886 . T . PASS END=136664977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:52:0,102,1800:0,102,255:40,0 chr2 136668709 . C . PASS END=136668780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:55:0,120,1800:0,161,255:40,0 chr2 136668952 . C . PASS END=136669063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,108,1620:0,128,255:40,0 chr2 136670056 . G . PASS END=136670136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,167,255:40,0 chr2 136670141 . A . PASS END=136670141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 136672031 . A . PASS END=136672031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr2 136672039 . C . PASS END=136672081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:83:0,120,1800:0,222,255:40,0 chr2 136673796 . C . PASS END=136673942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:92:36:0,92,1311:0,92,255:40,0 chr2 136678023 . C . PASS END=136678170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:87:42:0,87,1305:0,87,255:40,0 chr2 136680354 . C . PASS END=136680470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:50:0,120,1800:0,134,255:40,0 chr2 136680471 . C . PASS END=136680471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:62:53:0,62,1615:0,62,255:40,0 chr2 136680472 . T . PASS END=136680488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:43:0,96,1435:0,96,255:40,0 chr2 136681957 . C . PASS END=136682068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,99,1485:0,99,255:40,0 chr2 136690353 . C . PASS END=136690364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:88:0,120,1800:0,215,255:40,0 chr2 136690365 . G . PASS END=136690411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:81:75:0,81,1215:0,178,255:40,0 chr2 136690412 . C . PASS END=136690412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:78:75:0,78,1170:0,208,255:25,0 chr2 136691479 . C . PASS END=136691560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:37:0,96,1408:0,101,255:40,0 chr2 136700927 . T . PASS END=136701050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:80:38:0,80,1322:0,80,255:40,0 chr2 136718966 . T . PASS END=136719061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:31:0,82,1260:0,82,255:40,0 chr2 136719062 . T . PASS END=136719062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 136719063 . G . PASS END=136719068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 136736844 . C . PASS END=136736936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,105,1532:0,105,255:40,0 chr2 136740967 . C . PASS END=136741024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:65:0,120,1800:0,178,255:40,0 chr2 136742973 . T . PASS END=136742986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,113,1506:0,113,255:40,0 chr2 136742987 . T . PASS END=136742987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1504:0,78,255:40,0 chr2 136742988 . G . PASS END=136743092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:34:0,81,1215:0,92,255:40,0 chr2 136743093 . C . PASS END=136743107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr2 136743108 . T . PASS END=136743116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:26:0,54,810:0,78,255:19,0 chr2 136743117 . C . PASS END=136743118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 136743119 . C . PASS END=136743133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 136872439 . T . PASS END=136872439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 136872440 . T . PASS END=136872443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 136872444 . T . PASS END=136872444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 136872445 . G . PASS END=136872452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:25,0 chr2 136872453 . A . PASS END=136872453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 136872454 . A . PASS END=136872470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,931:0,75,255:26,0 chr2 136872471 . C . PASS END=136872492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr2 136872493 . A . PASS END=136872504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:26,0 chr2 136872505 . T . PASS END=136872509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 136872510 . A . PASS END=136872514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr2 136872515 . A . PASS END=136872519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 136872520 . G . PASS END=136872521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 136872522 . G . PASS END=136872772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:29:0,84,1260:0,87,255:40,0 chr2 136872773 . A . PASS END=136872773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:30,0 chr2 136872774 . C . PASS END=136872970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,86,255:40,0 chr2 136872971 . T . PASS END=136872971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 136872972 . T . PASS END=136872980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 136872981 . T . PASS END=136872981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,1 chr2 136872982 . G . PASS END=136872985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1053:0,55,255:28,1 chr2 136872986 . T . PASS END=136872993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1155:0,80,255:29,0 chr2 136872994 . A . PASS END=136872994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 136872995 . G . PASS END=136872998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 136872999 . G . PASS END=136873000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,1016:0,48,255:28,0 chr2 136873001 . A . PASS END=136873009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 136873010 . G . PASS END=136873018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:31:0,62,1056:0,62,255:26,0 chr2 136873019 . A . PASS END=136873019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:25,0 chr2 136873020 . C . PASS END=136873020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 136873021 . G . PASS END=136873024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 136873025 . A . PASS END=136873025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1011:0,54,255:27,0 chr2 136873026 . C . PASS END=136873033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 136873034 . A . PASS END=136873044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,986:0,67,255:26,0 chr2 136873045 . C . PASS END=136873049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 136873050 . G . PASS END=136873061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 136873062 . T . PASS END=136873072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 136873073 . G . PASS END=136873097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,947:0,64,255:26,0 chr2 136873098 . G . PASS END=136873101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 136873102 . C . PASS END=136873102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:28,0 chr2 136873103 . A . PASS END=136873114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 136873115 . G . PASS END=136873115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 136873116 . C . PASS END=136873117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 136873118 . A . PASS END=136873119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 136873120 . G . PASS END=136873127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 136873128 . C . PASS END=136873128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:27,0 chr2 136873129 . A . PASS END=136873129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:26,0 chr2 136873130 . C . PASS END=136873131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1100:0,54,255:26,0 chr2 136873132 . G . PASS END=136873135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 136873136 . T . PASS END=136873156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,945:0,65,255:26,0 chr2 136873157 . A . PASS END=136873157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 136873158 . C . PASS END=136873170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr2 136873171 . G . PASS END=136873184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr2 136873185 . C . PASS END=136873188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr2 136873189 . G . PASS END=136873189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136873190 . T . PASS END=136873190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 136873191 . A . PASS END=136873192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136873193 . C . PASS END=136873193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 136873194 . A . PASS END=136873195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 136873196 . T . PASS END=136873196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,902:0,54,255:27,0 chr2 136873197 . T . PASS END=136873197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 136873198 . T . PASS END=136873201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 136873202 . A . PASS END=136873202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 136873203 . C . PASS END=136873209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1141:0,90,255:34,0 chr2 136873210 . A . PASS END=136873210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr2 136873211 . A . PASS END=136873220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:34:0,95,1047:0,95,255:38,0 chr2 136873221 . A . PASS END=136873221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:37,0 chr2 136873222 . G . PASS END=136873496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:33:0,90,1214:0,92,255:40,0 chr2 136873497 . A . PASS END=136873509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:26,0 chr2 136874046 . C . PASS END=136874054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,570:0,48,255:18,0 chr2 136874055 . C . PASS END=136874055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 136874056 . T . PASS END=136874059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr2 136874060 . A . PASS END=136874061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 136874062 . C . PASS END=136874072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,714:0,46,255:19,0 chr2 136874073 . G . PASS END=136874078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 136874079 . A . PASS END=136874079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:22,0 chr2 136874080 . G . PASS END=136874080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 136874081 . A . PASS END=136874081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:22,0 chr2 136874082 . G . PASS END=136874082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 136874083 . A . PASS END=136874083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:22,0 chr2 136874084 . A . PASS END=136874084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,782:0,30,255:22,0 chr2 136874085 . T . PASS END=136874085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr2 136874086 . G . PASS END=136874086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:21,0 chr2 136874087 . C . PASS END=136874087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 136874088 . G . PASS END=136874096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,720:0,69,255:23,0 chr2 136874097 . A . PASS END=136874098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 136874099 . G . PASS END=136874103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 136874104 . C . PASS END=136874104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 136874105 . C . PASS END=136874108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,862:0,72,255:25,0 chr2 136874109 . C . PASS END=136874109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 136874110 . G . PASS END=136874110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 136874111 . G . PASS END=136874111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 136874112 . T . PASS END=136874118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 136874119 . G . PASS END=136874124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 136874125 . T . PASS END=136874125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 136874126 . T . PASS END=136874130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 136874131 . G . PASS END=136874132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 136874133 . G . PASS END=136874134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 136874135 . G . PASS END=136874143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,978:0,70,255:26,0 chr2 136874144 . A . PASS END=136874144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:26,0 chr2 136874145 . A . PASS END=136874147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 136874148 . A . PASS END=136874149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 136874150 . C . PASS END=136874150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 136874151 . A . PASS END=136874155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr2 136874156 . G . PASS END=136874156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr2 136874157 . C . PASS END=136874170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 136874171 . A . PASS END=136874181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr2 136874182 . C . PASS END=136874183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 136874184 . C . PASS END=136874193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,986:0,67,255:27,0 chr2 136874194 . G . PASS END=136874194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 136874195 . G . PASS END=136874196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 136874197 . C . PASS END=136874199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 136874200 . T . PASS END=136874231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,67,255:26,0 chr2 136874232 . T . PASS END=136874251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:16:0,48,568:0,48,255:17,0 chr2 136874252 . C . PASS END=136874252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 136874253 . A . PASS END=136874258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 136875616 . A . PASS END=136875630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,841:0,61,255:26,0 chr2 137639749 . A . PASS END=137639757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:30,0 chr2 137639758 . A . PASS END=137639758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 137639759 . A . PASS END=137639887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:31:0,93,1101:0,93,255:40,0 chr2 137664018 . G . PASS END=137664031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,152,255:40,0 chr2 137748462 . A . PASS END=137748507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:90:0,120,1800:0,254,255:40,0 chr2 137813990 . G . PASS END=137813999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 137814000 . A . PASS END=137814001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 137814002 . G . PASS END=137814006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:26,0 chr2 137814007 . A . PASS END=137814026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,976:0,81,255:30,0 chr2 137814027 . A . PASS END=137814027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 137814028 . G . PASS END=137814029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 137814030 . A . PASS END=137814030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 137814031 . G . PASS END=137814064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1302:0,87,255:38,0 chr2 137814065 . A . PASS END=137814065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1340:0,67,255:36,0 chr2 137814066 . C . PASS END=137814128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1224:0,84,255:40,0 chr2 137814129 . T . PASS END=137814129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:35,0 chr2 137814130 . T . PASS END=137814439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:34:0,88,1205:0,88,255:40,2 chr2 137814440 . A . PASS END=137814476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,120,1800:0,127,255:40,0 chr2 137814477 . C G, 195.64 PASS DP=51;MQ=250.00;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,25,0:0,25,0:146:233,149,0,1809,149,1809:255,150,0:0,0:1.9564e+02,1.4564e+02,0.0000e+00,4.5000e+02,1.8041e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,24:0,0,21,29 chr2 137814478 . C . PASS END=137814514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,123,255:40,0 chr2 137814515 . A . PASS END=137814656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:37:0,81,1343:0,81,255:40,0 chr2 137814657 . T . PASS END=137814657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1436:0,77,255:40,0 chr2 137814658 . A . PASS END=137814659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:44:0,93,1560:0,93,255:40,0 chr2 137814660 . C . PASS END=137814660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1454:0,77,255:40,0 chr2 137814661 . T . PASS END=137814661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1558:0,116,255:40,0 chr2 137814662 . C . PASS END=137814662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1551:0,77,255:40,0 chr2 137814663 . T . PASS END=137814800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:37:0,81,1215:0,83,255:40,0 chr2 137852443 . C . PASS END=137852443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 137852444 . C . PASS END=137852444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 137852445 . T . PASS END=137852445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr2 137852446 . T . PASS END=137852446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr2 137852447 . T . PASS END=137852448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 137852449 . C . PASS END=137852449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 137852450 . C . PASS END=137852450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 137852451 . T . PASS END=137852451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr2 137852452 . T . PASS END=137852452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 137852453 . C . PASS END=137852453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 137852454 . A . PASS END=137852455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 137852456 . G . PASS END=137852457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,571:0,13,255:21,0 chr2 137852458 . T . PASS END=137852459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 137852460 . C . PASS END=137852460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,737:0,14,255:21,0 chr2 137852461 . C . PASS END=137852461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 137852462 . T . PASS END=137852462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:21,0 chr2 137852463 . T . PASS END=137852463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 137852464 . C . PASS END=137852464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 137852465 . C . PASS END=137852465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,868:0,36,255:24,0 chr2 137852466 . C . PASS END=137852466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 137852467 . A . PASS END=137852467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr2 137852468 . T . PASS END=137852468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:24,0 chr2 137852469 . T . PASS END=137852474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,945:0,62,255:30,0 chr2 137852475 . T . PASS END=137852691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:83:32:0,83,1216:0,83,255:40,0 chr2 137872694 . G . PASS END=137872694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 137872695 . T . PASS END=137872706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,666:0,46,255:20,0 chr2 137872707 . A . PASS END=137872734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:26,0 chr2 137872735 . C . PASS END=137872736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 137872737 . C . PASS END=137872737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 137872738 . T . PASS END=137872739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1194:0,93,255:31,0 chr2 137872740 . C . PASS END=137872740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr2 137872741 . T . PASS END=137872741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:30,0 chr2 137872742 . C . PASS END=137872825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1186:0,83,255:37,0 chr2 137872826 . G . PASS END=137872844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 137872845 . G . PASS END=137872856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:21:0,45,675:0,63,255:19,0 chr2 137872857 . A . PASS END=137872863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:17:0,39,585:0,51,255:13,0 chr2 137917783 . T . PASS END=137917783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr2 137917784 . C . PASS END=137917784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 137917785 . T . PASS END=137917785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr2 137917786 . C . PASS END=137917789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 137917790 . A . PASS END=137917790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 137917791 . C . PASS END=137917796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 137917797 . G . PASS END=137917797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,2 chr2 137917798 . A . PASS END=137917798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,1002:0,24,255:29,2 chr2 137917799 . A . PASS END=137917799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:30,0 chr2 137917800 . A . PASS END=137917802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 137917803 . G . PASS END=137917803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 137917804 . C . PASS END=137917884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:30:0,90,1113:0,90,255:40,0 chr2 137917885 . C . PASS END=137917921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:37:0,81,1244:0,81,255:40,0 chr2 137917922 . T A, 49.36 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=0.281;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,16,0:0.457,0.000:35:11,7,0:8,9,0:48:84,0,50,527,672,1199:255,0,255:18,0:4.9357e+01,7.2222e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,7,9:5,14,8,8 chr2 137917923 . C . PASS END=137917930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,89,255:32,0 chr2 137917931 . G . PASS END=137917931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:29,2 chr2 137917932 . A . PASS END=137917932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:32:34:0,32,1058:0,32,255:29,2 chr2 137917933 . A . PASS END=137917933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr2 137917934 . A . PASS END=137917938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr2 137928311 . G . PASS END=137928319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:17,0 chr2 137928320 . C T, 49.87 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=1.107;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:4,3,0:5,5,0:48:85,0,50,278,322,600:251,0,255:9,0:4.9873e+01,6.6527e-05,5.3000e+01,2.7804e+02,3.5666e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,6,2:5,4,3,5 chr2 137928321 . G . PASS END=137928334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:18,0 chr2 137928335 . T . PASS END=137928352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr2 137928353 . G . PASS END=137928357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 137928358 . G . PASS END=137928366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:31,0 chr2 137928367 . T . PASS END=137928367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:30,0 chr2 137928368 . G . PASS END=137928371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 137928372 . T . PASS END=137928372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 137928373 . C . PASS END=137928472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1212:0,86,255:39,0 chr2 137928473 . A . PASS END=137928499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,937:0,62,255:26,0 chr2 137928500 . A . PASS END=137928500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 137928501 . T . PASS END=137928502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 137928503 . A . PASS END=137928503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 137928504 . C . PASS END=137928505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 137928506 . G . PASS END=137928508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,55,255:17,0 chr2 137988614 . G . PASS END=137988614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 137988615 . A . PASS END=137988615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr2 137988616 . G . PASS END=137988620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,914:0,81,255:29,0 chr2 137988621 . T . PASS END=137988622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1047:0,71,255:28,0 chr2 137988623 . T . PASS END=137988629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 137988630 . G . PASS END=137988630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 137988631 . A . PASS END=137988632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr2 137988633 . T . PASS END=137988633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1158:0,63,255:31,0 chr2 137988634 . C . PASS END=137988771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1091:0,80,255:40,0 chr2 137988772 . A . PASS END=137988792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:24:0,62,906:0,62,255:26,0 chr2 137988793 . C . PASS END=137988805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,53,255:18,0 chr2 137990469 . G . PASS END=137990469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:25,0 chr2 137990470 . T . PASS END=137990479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 137990480 . T . PASS END=137990480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:27,0 chr2 137990481 . G . PASS END=137990654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1243:0,81,255:40,0 chr2 137990655 . G . PASS END=137990655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 137990656 . G . PASS END=137990667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:33,0 chr2 137990668 . T . PASS END=137990692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 137990693 . A . PASS END=137990693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 137990694 . T . PASS END=137990695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 137990696 . A . PASS END=137990696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 137990697 . C . PASS END=137990698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 137990699 . A . PASS END=137990703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:19,0 chr2 138000027 . A . PASS END=138000142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:92:41:0,92,1537:0,92,255:40,2 chr2 138030103 . G . PASS END=138030109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1434:0,101,255:39,0 chr2 138030110 . C . PASS END=138030110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr2 138030111 . A . PASS END=138030198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:39:0,84,1260:0,90,255:40,0 chr2 138030199 . A . PASS END=138030232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,856:0,61,255:26,0 chr2 138033493 . G . PASS END=138033573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,108,1619:0,116,255:40,0 chr2 138033574 . T . PASS END=138033587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:41:0,81,1215:0,110,255:35,0 chr2 138033588 . A . PASS END=138033590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:40:0,78,1170:0,103,255:26,0 chr2 138033591 . C . PASS END=138033592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,101,255:27,0 chr2 138033593 . A . PASS END=138033596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:39:0,66,990:0,117,255:23,0 chr2 138163183 . C . PASS END=138163183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 138163184 . T . PASS END=138163184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 138163185 . G . PASS END=138163185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 138163186 . T . PASS END=138163186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,805:0,64,255:26,0 chr2 138163187 . C . PASS END=138163190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:28,0 chr2 138163191 . T . PASS END=138163191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 138163192 . G . PASS END=138163209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:28:0,84,981:0,84,255:35,0 chr2 138163210 . G . PASS END=138163210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1270:0,56,255:34,0 chr2 138163211 . G . PASS END=138163353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:37:0,94,1312:0,94,255:40,0 chr2 138163354 . A . PASS END=138163374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1350:0,81,255:39,0 chr2 138163375 . C . PASS END=138163377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:25,0 chr2 138169179 . G . PASS END=138169185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 138169186 . C . PASS END=138169188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 138169189 . A . PASS END=138169195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 138169196 . G . PASS END=138169200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 138169201 . A . PASS END=138169201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 138169202 . T . PASS END=138169390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:86:34:0,86,1239:0,86,255:40,0 chr2 138169391 . T . PASS END=138169391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1368:0,76,255:31,0 chr2 138169392 . G . PASS END=138169420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1115:0,80,255:33,0 chr2 138169421 . C . PASS END=138169421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 138169422 . C . PASS END=138169423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 138169424 . T . PASS END=138169428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 138169429 . C . PASS END=138169429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 138169430 . T . PASS END=138169430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr2 138169431 . G . PASS END=138169437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 138169438 . C . PASS END=138169442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 138208415 . G . PASS END=138208593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,111,1676:0,111,255:40,0 chr2 138208594 . G . PASS END=138208594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 138264231 . A . PASS END=138264231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 138320783 . C . PASS END=138320784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1411:0,93,255:40,0 chr2 138320786 . G . PASS END=138320924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:39:0,102,1528:0,102,255:40,2 chr2 138329976 . A . PASS END=138330126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:84:38:0,84,1349:0,84,255:40,0 chr2 138373745 . T . PASS END=138373886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:32:0,96,1143:0,96,255:40,0 chr2 138375962 . A . PASS END=138376077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:38:0,90,1350:0,114,255:40,0 chr2 138378179 . C . PASS END=138378180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 138378181 . T . PASS END=138378181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 138378182 . A . PASS END=138378184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 138378185 . T . PASS END=138378185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr2 138378186 . T . PASS END=138378203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,870:0,65,255:26,0 chr2 138378204 . T . PASS END=138378292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,978:0,81,255:40,0 chr2 138378293 . G . PASS END=138378293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 138378294 . G . PASS END=138378296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 138400058 . G . PASS END=138400189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1169:0,80,255:40,0 chr2 138400190 . C . PASS END=138400190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:27,0 chr2 138400191 . A . PASS END=138400197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1185:0,80,255:29,0 chr2 138400198 . T . PASS END=138400203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 138413071 . G . PASS END=138413189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:28:0,84,1004:0,84,255:40,0 chr2 138413190 . G . PASS END=138413190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:28,0 chr2 138413191 . G . PASS END=138413194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:30,0 chr2 138413195 . G . PASS END=138413195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 138413196 . C . PASS END=138413201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 138413202 . G . PASS END=138413202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1035:0,62,255:26,0 chr2 138413203 . A . PASS END=138413203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 138413204 . A . PASS END=138413205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 138413206 . C . PASS END=138413206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:24,0 chr2 138413207 . A . PASS END=138413228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,886:0,61,255:25,0 chr2 138413229 . A . PASS END=138413230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:47:26:0,47,855:0,47,255:19,0 chr2 138414366 . G . PASS END=138414539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,104,1710:0,104,255:40,0 chr2 138414635 . G . PASS END=138414730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:52:0,120,1800:0,149,255:40,0 chr2 138417234 . G . PASS END=138417237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,969:0,75,255:26,0 chr2 138417238 . C . PASS END=138417241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:30,0 chr2 138417242 . T . PASS END=138417242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 138417243 . C . PASS END=138417316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:31:0,90,1350:0,93,255:39,0 chr2 138420953 . G . PASS END=138420958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,161,255:40,0 chr2 138420959 . G . PASS END=138420995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:63:0,120,1800:0,162,255:40,0 chr2 138420996 . A G, 50.00 PASS DP=87;MQ=250.00;MQRankSum=7.874;ReadPosRankSum=3.541;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,50,0:0.581,0.000:86:17,28,0:19,22,0:47:85,0,48,1735,1259,2994:255,0,255:34,0:5.0000e+01,7.9988e-05,5.0750e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,14,38,12:21,15,30,20 chr2 138420997 . A . PASS END=138421033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:82:0,120,1800:0,200,255:40,0 chr2 138421034 . G . PASS END=138421145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,102,1530:0,119,255:40,0 chr2 138425344 . A . PASS END=138425431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:56:0,120,1800:0,120,255:40,0 chr2 138434094 . C . PASS END=138434175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,171,255:40,0 chr2 138722062 . A . PASS END=138722198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,120,1800:0,132,255:40,0 chr2 138724667 . A . PASS END=138724685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:84:0,120,1800:0,234,255:40,0 chr2 138724922 . A . PASS END=138724956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,102,1466:0,107,255:40,0 chr2 138727735 . G . PASS END=138727787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:86:0,120,1800:0,242,255:40,0 chr2 138738786 . A . PASS END=138738976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,107,1438:0,107,255:40,0 chr2 138746039 . C . PASS END=138746039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:102:0,120,1800:0,255,255:40,0 chr2 138758488 . G . PASS END=138758595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,117,1755:0,127,255:40,0 chr2 138759634 . A . PASS END=138759648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,167,255:40,0 chr2 138759649 . C T, 46.38 PASS DP=70;MQ=250.00;MQRankSum=7.043;ReadPosRankSum=5.041;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,28,0:0.400,0.000:70:27,13,0:15,15,0:46:81,0,50,972,1494,2466:255,0,255:40,0:4.6383e+01,1.2167e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,17,17,11:28,14,14,14 chr2 138759650 . A . PASS END=138759686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:70:0,120,1800:0,206,255:40,0 chr2 138759687 . G . PASS END=138759764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:84:0,120,1800:0,219,255:40,0 chr2 138759854 . G . PASS END=138759910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:89:0,120,1800:0,236,255:40,0 chr2 138762702 . A . PASS END=138762795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:65:0,120,1800:0,165,255:40,0 chr2 138771345 . G . PASS END=138771354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1135:0,85,255:31,0 chr2 138771355 . C . PASS END=138771355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:32,0 chr2 138771356 . T . PASS END=138771700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:81:33:0,81,1213:0,81,255:40,0 chr2 138771760 . A G, 47.68 PASS DP=117;MQ=250.00;MQRankSum=9.201;ReadPosRankSum=2.550;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:68,49,0:0.419,0.000:117:30,28,0:38,21,0:47:82,0,50,1705,2387,4092:255,0,255:40,0:4.7683e+01,9.5779e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,43,18,31:33,35,25,24 chr2 139278922 . G A, 50.00 PASS DP=51;MQ=248.66;MQRankSum=5.259;ReadPosRankSum=1.322;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,29,0:0.569,0.000:51:8,12,0:14,17,0:46:85,0,46,185,185,185:255,0,255:16,0:5.0000e+01,9.8627e-05,4.8952e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,4,23,6:8,14,14,15 chr2 139307787 . A . PASS END=139307864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:39:0,84,1665:0,84,255:40,2 chr2 139308053 . G . PASS END=139308174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:83:43:0,83,1510:0,83,255:40,0 chr2 139308473 . G . PASS END=139308624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:45:0,120,1800:0,135,255:40,0 chr2 139310124 . A . PASS END=139310251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:58:0,120,1800:0,161,255:40,0 chr2 139312009 . A . PASS END=139312016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,720:0,44,255:19,0 chr2 139312017 . G . PASS END=139312031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:24,0 chr2 139312032 . G . PASS END=139312032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 139312033 . A . PASS END=139312037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 139312038 . G . PASS END=139312038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 139312039 . A . PASS END=139312045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 139312046 . G . PASS END=139312061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 139312062 . A . PASS END=139312062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 139312063 . G . PASS END=139312078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 139312079 . C . PASS END=139312079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 139312080 . T . PASS END=139312080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr2 139312081 . C . PASS END=139312105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,947:0,64,255:26,0 chr2 139316592 . G . PASS END=139316769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:92:36:0,92,1294:0,92,255:40,0 chr2 139316852 . C . PASS END=139316907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:94:0,120,1800:0,231,255:40,0 chr2 139318375 . A . PASS END=139318378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:40:0,93,1474:0,93,255:40,0 chr2 139318379 . G . PASS END=139318497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,102,1484:0,102,255:40,0 chr2 139322278 . T . PASS END=139322420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,120,1800:0,132,255:40,0 chr2 139322510 . G . PASS END=139322563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,103,1800:0,103,255:40,0 chr2 139326506 . C . PASS END=139326650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:32:0,83,1202:0,83,255:40,0 chr2 139428492 . T . PASS END=139429030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,994:0,81,255:40,0 chr2 139429031 . T . PASS END=139429067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,102,1530:0,105,255:40,0 chr2 139429068 . G A, 48.38 PASS DP=53;MQ=250.00;MQRankSum=6.182;ReadPosRankSum=2.127;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,23,0:0.434,0.000:53:18,12,0:12,11,0:47:83,0,50,784,1073,1857:255,0,255:24,0:4.8382e+01,8.4907e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,23,10,13:15,15,11,12 chr2 139429069 . T . PASS END=139429105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,111,1574:0,113,255:40,0 chr2 139429106 . T . PASS END=139429208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1215:0,84,255:40,0 chr2 139429209 . C . PASS END=139429235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,922:0,62,255:26,0 chr2 139537761 . C . PASS END=139537762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 139537763 . G . PASS END=139537763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 139537764 . C . PASS END=139537790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,917:0,75,255:25,0 chr2 139537791 . G . PASS END=139537791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr2 139537792 . G . PASS END=139537799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 139537800 . C . PASS END=139537800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 139537801 . C . PASS END=139537802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 139537803 . C . PASS END=139537804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 139537805 . G . PASS END=139537809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 139537810 . A . PASS END=139537811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:17,0 chr2 140990755 . T . PASS END=140990895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:46:0,117,1755:0,121,255:40,0 chr2 140992355 . C . PASS END=140992381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,173,255:40,0 chr2 140992382 . A . PASS END=140992453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,102,1530:0,116,255:40,0 chr2 140995721 . C . PASS END=140995865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:60:0,120,1800:0,164,255:40,0 chr2 140997011 . C . PASS END=140997101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,120,1800:0,129,255:40,0 chr2 141004655 . T . PASS END=141004731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:58:0,120,1800:0,170,255:40,0 chr2 141026837 . T . PASS END=141026854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1097:0,82,255:33,0 chr2 141026855 . A . PASS END=141026855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr2 141026856 . A . PASS END=141026873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:91:32:0,91,1150:0,91,255:33,0 chr2 141026874 . T . PASS END=141026874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:31,0 chr2 141026875 . C . PASS END=141026906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1319:0,84,255:39,0 chr2 141026907 . T . PASS END=141026907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1220:0,62,255:37,0 chr2 141026908 . C . PASS END=141026950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1147:0,80,255:39,0 chr2 141027811 . A . PASS END=141027888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,131,255:40,0 chr2 141027889 . C . PASS END=141027915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:37:0,90,1350:0,111,255:40,0 chr2 141031993 . T . PASS END=141032001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,967:0,84,255:29,0 chr2 141032002 . A . PASS END=141032005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:73:30:0,73,906:0,73,255:31,0 chr2 141032006 . C . PASS END=141032007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1166:0,96,255:33,0 chr2 141032008 . T . PASS END=141032008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1095:0,60,255:32,0 chr2 141032009 . C . PASS END=141032015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1233:0,86,255:34,0 chr2 141032016 . T . PASS END=141032016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1194:0,61,255:31,0 chr2 141032017 . T . PASS END=141032050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:94:37:0,94,1213:0,94,255:40,0 chr2 141032051 . C . PASS END=141032087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:54:0,120,1800:0,162,255:40,0 chr2 141032088 . C T, 244.70 PASS DP=66;MQ=249.84;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,34,0:0,32,0:195:282,198,0,382,382,382:255,198,0:0,0:2.4470e+02,1.9470e+02,0.0000e+00,3.7947e+02,4.1424e+02,3.8248e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,36,30:0,0,38,28 chr2 141032089 . G . PASS END=141032125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,136,255:40,0 chr2 141032126 . T . PASS END=141032152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:41:0,84,1260:0,107,255:40,0 chr2 141032153 . A . PASS END=141032162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:31:0,63,945:0,93,255:26,0 chr2 141032163 . C . PASS END=141032163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,980:0,51,255:19,0 chr2 141032164 . A . PASS END=141032166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,71,255:20,0 chr2 141032167 . T . PASS END=141032167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,779:0,48,255:18,0 chr2 141055377 . A . PASS END=141055524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:29:0,81,1215:0,87,255:40,0 chr2 141055525 . G . PASS END=141055538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr2 141072504 . C . PASS END=141072668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:84:36:0,84,1220:0,84,255:40,0 chr2 141079532 . C . PASS END=141079634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:36:0,92,1294:0,92,255:40,0 chr2 141079635 . T . PASS END=141079635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:32,0 chr2 141079636 . A . PASS END=141079650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:33:0,81,1205:0,86,255:33,0 chr2 141079651 . T . PASS END=141079657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:66:29:0,66,990:0,85,255:24,0 chr2 141081462 . A . PASS END=141081635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:51:0,120,1800:0,122,255:40,0 chr2 141083331 . C . PASS END=141083447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:30:0,87,1022:0,90,255:40,0 chr2 141092022 . C . PASS END=141092128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:87:0,120,1800:0,229,255:40,0 chr2 141093184 . C . PASS END=141093199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,816:0,61,255:26,0 chr2 141093200 . C . PASS END=141093209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:32,0 chr2 141093210 . A . PASS END=141093210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:30,0 chr2 141093211 . T . PASS END=141093407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:33:0,86,1173:0,86,255:40,0 chr2 141108366 . A . PASS END=141108587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:84:33:0,84,1260:0,99,255:40,0 chr2 141108588 . G . PASS END=141108592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 141108593 . C . PASS END=141108596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 141108597 . A . PASS END=141108607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,73,255:24,0 chr2 141110522 . C . PASS END=141110639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:56:0,120,1800:0,168,255:40,0 chr2 141110640 . G . PASS END=141110641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:66:0,120,1800:0,198,255:40,0 chr2 141113911 . C . PASS END=141114045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:81:37:0,81,1215:0,94,255:40,0 chr2 141115548 . C . PASS END=141115685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,99,1485:0,150,255:40,0 chr2 141116390 . C . PASS END=141116515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:40:0,87,1399:0,87,255:40,0 chr2 141122230 . C . PASS END=141122352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:45:0,119,1629:0,119,255:40,0 chr2 141128279 . C . PASS END=141128411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:53:0,117,1755:0,126,255:40,0 chr2 141128748 . C . PASS END=141128854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:53:0,120,1800:0,126,255:40,0 chr2 141130577 . C . PASS END=141130585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,153,255:40,0 chr2 141130586 . A . PASS END=141130657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,127,255:40,0 chr2 141130658 . C . PASS END=141130694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,117,1755:0,122,255:40,0 chr2 141130695 . C T, 46.50 PASS DP=45;MQ=249.83;MQRankSum=5.618;ReadPosRankSum=0.637;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,18,0:0.400,0.000:45:15,8,0:12,10,0:46:81,0,50,644,964,1608:255,0,255:23,0:4.6503e+01,1.1882e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,18,8,10:17,10,12,6 chr2 141130696 . T . PASS END=141130706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:41:0,85,1496:0,85,255:40,0 chr2 141135749 . C . PASS END=141135820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,116,1620:0,116,255:40,0 chr2 141135821 . A . PASS END=141135842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:53:0,84,1260:0,146,255:40,0 chr2 141135843 . C . PASS END=141135847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:60:50:0,60,900:0,146,255:24,0 chr2 141135848 . C . PASS END=141135855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:45:41:0,45,675:0,123,255:19,0 chr2 141143462 . T . PASS END=141143578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:97:44:0,97,1542:0,97,255:40,1 chr2 141200073 . C . PASS END=141200192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:40:0,93,1381:0,93,255:40,0 chr2 141201899 . G . PASS END=141202018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,102,1530:0,117,255:40,0 chr2 141202132 . C . PASS END=141202248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,120,1800:0,127,255:40,0 chr2 141208137 . G . PASS END=141208230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,130,255:40,0 chr2 141214024 . C . PASS END=141214025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 141214026 . G . PASS END=141214026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1145:0,66,255:31,0 chr2 141214027 . G . PASS END=141214172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:81:33:0,81,1202:0,81,255:40,0 chr2 141215032 . C . PASS END=141215034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 141215035 . C . PASS END=141215035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 141215036 . A . PASS END=141215039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 141215040 . T . PASS END=141215040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:26,0 chr2 141215041 . G . PASS END=141215190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:31:0,80,1141:0,80,255:40,0 chr2 141215191 . C . PASS END=141215191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1332:0,70,255:35,0 chr2 141215192 . A . PASS END=141215204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1260:0,101,255:38,0 chr2 141215205 . A . PASS END=141215217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,77,255:26,0 chr2 141215218 . G . PASS END=141215218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,971:0,53,255:20,0 chr2 141215219 . G . PASS END=141215219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 141215220 . A . PASS END=141215220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:17,0 chr2 141232707 . C . PASS END=141232906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:88:42:0,88,1323:0,88,255:40,0 chr2 141242912 . C . PASS END=141243093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:46:0,120,1800:0,134,255:40,2 chr2 141245186 . C . PASS END=141245308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,99,1511:0,99,255:40,0 chr2 141250175 . A . PASS END=141250175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr2 141250177 . C . PASS END=141250262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:82:0,120,1800:0,224,255:40,0 chr2 141253134 . C . PASS END=141253317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:38:0,111,1346:0,112,255:40,0 chr2 141259256 . C . PASS END=141259443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:36:0,85,1395:0,85,255:40,0 chr2 141260532 . C . PASS END=141260630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:91:40:0,91,1543:0,91,255:40,0 chr2 141260631 . C . PASS END=141260667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,117,1755:0,138,255:40,0 chr2 141260668 . A G, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.177;ReadPosRankSum=3.450;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,26,0:0.500,0.000:52:13,11,0:13,15,0:48:85,0,50,924,914,1837:255,0,255:18,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,19,8,18:16,10,15,11 chr2 141260669 . T . PASS END=141260672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,105,1575:0,144,255:37,0 chr2 141264365 . C . PASS END=141264487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,140,255:40,0 chr2 141267497 . C . PASS END=141267526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,437:0,36,255:13,0 chr2 141267527 . C . PASS END=141267539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,681:0,41,255:19,0 chr2 141267540 . C . PASS END=141267543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 141267544 . T . PASS END=141267549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 141267550 . T . PASS END=141267556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 141267557 . G . PASS END=141267557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 141267558 . C . PASS END=141267558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 141267559 . C . PASS END=141267570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 141267571 . A . PASS END=141267571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr2 141267572 . C . PASS END=141267602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:14:0,41,498:0,41,255:19,0 chr2 141267603 . G . PASS END=141267603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 141267604 . T . PASS END=141267607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 141267608 . C . PASS END=141267609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 141267610 . G . PASS END=141267611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 141267612 . A . PASS END=141267625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr2 141272222 . C . PASS END=141272317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,106,1337:0,106,255:40,0 chr2 141272318 . A . PASS END=141272341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,126,255:40,0 chr2 141274458 . C . PASS END=141274538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,206,255:40,0 chr2 141274539 . G . PASS END=141274575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:60:0,120,1800:0,131,255:40,0 chr2 141274576 . T C, 224.56 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,31,0:0,28,0:175:262,178,0,2252,178,2252:255,180,0:0,0:2.2456e+02,1.7456e+02,0.0000e+00,4.5000e+02,2.0933e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,42:0,0,27,32 chr2 141274577 . T . PASS END=141274580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,152,255:40,0 chr2 141283413 . C . PASS END=141283562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,114,1474:0,117,255:40,0 chr2 141283806 . T . PASS END=141283919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:49:0,120,1800:0,131,255:40,0 chr2 141291590 . C . PASS END=141291697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,114,1710:0,125,255:40,0 chr2 141291698 . A . PASS END=141291698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1404:0,76,255:37,0 chr2 141291699 . G . PASS END=141291709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1325:0,87,255:39,0 chr2 141294150 . C . PASS END=141294235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:56:0,110,1800:0,110,255:40,0 chr2 141294236 . C . PASS END=141294278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:59:0,114,1710:0,114,255:40,0 chr2 141298542 . T . PASS END=141298667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:40:0,107,1443:0,107,255:40,0 chr2 141299348 . A . PASS END=141299524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:86:34:0,86,1280:0,86,255:40,0 chr2 141299525 . C . PASS END=141299540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:27:0,66,990:0,68,255:26,0 chr2 141356200 . A . PASS END=141356404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:33:0,81,1215:0,99,255:40,0 chr2 141359019 . T . PASS END=141359019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 141359020 . T . PASS END=141359020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 141359021 . T . PASS END=141359175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:31:0,82,1074:0,82,255:40,0 chr2 141359176 . T . PASS END=141359193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:25,0 chr2 141359194 . C . PASS END=141359194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr2 141359195 . C . PASS END=141359198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:21,0 chr2 141359199 . G . PASS END=141359208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:19,0 chr2 141457819 . T . PASS END=141457819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 141457820 . T . PASS END=141457825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1067:0,93,255:32,0 chr2 141457826 . A . PASS END=141457826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 141457827 . A . PASS END=141457829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1169:0,80,255:34,0 chr2 141457830 . A . PASS END=141457830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:33,0 chr2 141457831 . C . PASS END=141457836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1252:0,89,255:35,0 chr2 141457837 . T . PASS END=141457838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:35:0,72,1257:0,72,255:36,0 chr2 141457839 . T . PASS END=141457969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:37:0,108,1305:0,108,255:40,0 chr2 141457970 . C . PASS END=141457970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,8:59:1:59:0,1,1465:0,1,255:40,0 chr2 141457971 . T . PASS END=141458183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:39:0,81,1215:0,87,255:40,0 chr2 141458184 . T . PASS END=141458190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:34:0,72,1080:0,83,255:26,0 chr2 141459290 . C . PASS END=141459414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:30:0,87,1004:0,88,255:40,0 chr2 141459710 . C . PASS END=141459722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:32,0 chr2 141459723 . A . PASS END=141459723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:43:33:0,43,1005:0,43,255:31,0 chr2 141459724 . G . PASS END=141459861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:33:0,96,1263:0,96,255:40,0 chr2 141459996 . C . PASS END=141460122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:30:0,84,1260:0,90,255:40,0 chr2 141473542 . C . PASS END=141473559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:43:0,98,1529:0,98,255:40,0 chr2 141473560 . G . PASS END=141473671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:44:0,114,1710:0,121,255:40,0 chr2 141474251 . C . PASS END=141474385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:53:0,120,1800:0,129,255:40,0 chr2 141526782 . C . PASS END=141526913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:48:0,111,1631:0,111,255:40,0 chr2 141528450 . C . PASS END=141528554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:93:41:0,93,1387:0,93,255:40,0 chr2 141528555 . T . PASS END=141528575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,114,1710:0,121,255:40,0 chr2 141533667 . C . PASS END=141533699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,108,1409:0,114,255:40,0 chr2 141533700 . G . PASS END=141533807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:97:40:0,97,1485:0,97,255:40,0 chr2 141571226 . C . PASS END=141571291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:60:0,120,1800:0,156,255:40,0 chr2 141571292 . C . PASS END=141571328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,230,255:40,0 chr2 141571329 . T C, 287.77 PASS DP=80;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,80,0:1.000,0.000:80:0,47,0:0,33,0:238:326,241,0,3086,241,3086:255,241,0:0,0:2.8777e+02,2.3777e+02,0.0000e+00,4.5000e+02,2.7254e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,43:0,0,34,46 chr2 141571330 . G . PASS END=141571366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:52:0,87,1305:0,149,255:40,0 chr2 141571367 . T . PASS END=141571372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:36:0,87,1305:0,91,255:29,0 chr2 141571373 . G . PASS END=141571375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:34:0,66,990:0,91,255:22,0 chr2 141597560 . C . PASS END=141597654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,2:95:99:67:0,120,1800:0,184,255:40,0 chr2 141598487 . C . PASS END=141598492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1150:0,96,255:33,0 chr2 141598493 . A . PASS END=141598493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:31,0 chr2 141598494 . C . PASS END=141598516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:33:0,86,1227:0,86,255:40,0 chr2 141598517 . G . PASS END=141598659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:38:0,90,1350:0,91,255:40,0 chr2 141598660 . A . PASS END=141598660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr2 141598661 . T . PASS END=141598661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,97,255:26,0 chr2 141607671 . C . PASS END=141607671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr2 141607672 . T . PASS END=141607672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1089:0,72,255:33,0 chr2 141607673 . C . PASS END=141607882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:89:35:0,89,1221:0,89,255:40,0 chr2 141607883 . A . PASS END=141607883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr2 141607884 . G . PASS END=141607898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:36:0,81,1280:0,81,255:35,0 chr2 141609221 . C . PASS END=141609227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:38:0,85,1466:0,85,255:39,0 chr2 141609228 . G . PASS END=141609228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1405:0,71,255:38,0 chr2 141609229 . G . PASS END=141609352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:38:0,93,1518:0,93,255:40,0 chr2 141625159 . C . PASS END=141625159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr2 141625160 . C . PASS END=141625160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 141625161 . T . PASS END=141625169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1127:0,93,255:32,0 chr2 141625170 . C . PASS END=141625170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:31,0 chr2 141625171 . G . PASS END=141625403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1117:0,80,255:40,0 chr2 141625668 . C . PASS END=141625668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,909:0,32,255:25,0 chr2 141625669 . T . PASS END=141625675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:28,0 chr2 141625676 . T . PASS END=141625676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:34,0 chr2 141625677 . G . PASS END=141625789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:44:0,102,1584:0,102,255:40,0 chr2 141625790 . A . PASS END=141625827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:59:0,99,1485:0,125,255:40,0 chr2 141625828 . G . LowGQ END=141625828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,10:57:0:57:0,0,1214:18,0,255:31,0 chr2 141625829 . A . PASS END=141625831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,107,1620:0,107,255:36,2 chr2 141625832 . T . PASS END=141625832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:50:56:0,50,1592:0,50,255:34,2 chr2 141641386 . C . PASS END=141641393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:32,0 chr2 141641394 . T . PASS END=141641394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1082:0,60,255:32,0 chr2 141641395 . G . PASS END=141641590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1125:0,82,255:40,0 chr2 141643707 . C . PASS END=141643904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:87:40:0,87,1313:0,87,255:40,0 chr2 141660489 . C . PASS END=141660734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:84:30:0,84,1217:0,86,255:40,0 chr2 141665446 . C . PASS END=141665455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 141665456 . G . PASS END=141665458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 141665459 . T . PASS END=141665459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:29,0 chr2 141665460 . T . PASS END=141665482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1141:0,80,255:37,0 chr2 141665483 . C . PASS END=141665483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:37,1 chr2 141665484 . T . PASS END=141665484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:44:39:0,44,1361:0,44,255:36,1 chr2 141665485 . T . PASS END=141665485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:38,0 chr2 141665486 . T . PASS END=141665620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:35:0,81,1215:0,90,255:40,0 chr2 141665621 . C . PASS END=141665629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 141665630 . T . PASS END=141665630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:14:28:0,14,840:0,14,255:25,0 chr2 141665631 . T . PASS END=141665631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 141665632 . T . PASS END=141665632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:23,0 chr2 141665633 . G . PASS END=141665633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr2 141665634 . T . PASS END=141665641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:23,0 chr2 141665642 . T . PASS END=141665642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:19,0 chr2 141665643 . C . PASS END=141665646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 141680534 . C . PASS END=141680551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,809:0,62,255:24,0 chr2 141680552 . A . PASS END=141680552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,752:0,55,255:23,0 chr2 141680553 . C . PASS END=141680570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr2 141680571 . C . PASS END=141680700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1142:0,83,255:40,0 chr2 141680701 . G . PASS END=141680701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:28,0 chr2 141680702 . C . PASS END=141680716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 141707804 . C . PASS END=141707827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,743:0,60,255:26,0 chr2 141707828 . C . PASS END=141707831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 141707832 . A . PASS END=141707832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:26,0 chr2 141707833 . T . PASS END=141707834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 141707835 . A . PASS END=141707835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 141707836 . C . PASS END=141707836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr2 141707837 . T . PASS END=141707843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:30,0 chr2 141707844 . C . PASS END=141707844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1030:0,57,255:28,0 chr2 141707845 . C . PASS END=141707847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:31,0 chr2 141707848 . C . PASS END=141707848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 141707849 . A . PASS END=141707850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 141707851 . T . PASS END=141707851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1015:0,60,255:28,0 chr2 141707852 . C . PASS END=141707854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 141707855 . T . PASS END=141707855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,972:0,46,255:28,0 chr2 141707856 . G . PASS END=141707905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:32:0,89,1209:0,89,255:39,0 chr2 141707906 . T . PASS END=141707906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:33,0 chr2 141707907 . G . PASS END=141707931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,85,255:34,0 chr2 141707932 . A . PASS END=141707954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:26,0 chr2 141707955 . G . PASS END=141707955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 141707956 . T . PASS END=141707958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 141707959 . C . PASS END=141707966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr2 141707967 . G . PASS END=141707967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:15,0 chr2 141707968 . T . PASS END=141707971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:17,0 chr2 141709429 . C . PASS END=141709456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,114,1459:0,117,255:40,0 chr2 141709457 . G . PASS END=141709509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:97:37:0,97,1575:0,97,255:40,0 chr2 141739729 . C . PASS END=141739844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:37:0,81,1215:0,94,255:40,0 chr2 141739845 . G . PASS END=141739845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr2 141747101 . C . PASS END=141747211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:47:0,90,1646:0,90,255:40,0 chr2 141747212 . G . PASS END=141747226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:40:0,87,1305:0,104,255:39,0 chr2 141751564 . A . PASS END=141751591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,116,1459:0,116,255:40,0 chr2 141751592 . G A, 200.04 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,24,0:0,27,0:150:238,153,0,1948,153,1948:255,153,0:0,0:2.0004e+02,1.5004e+02,0.0000e+00,4.5000e+02,1.8481e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,24:0,0,26,25 chr2 141751593 . T . PASS END=141751629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:51:0,120,1800:0,137,255:40,0 chr2 141751630 . C . PASS END=141751704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:39:0,90,1350:0,106,255:40,0 chr2 141762904 . A . PASS END=141763026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,120,1800:0,126,255:40,0 chr2 141771125 . C . PASS END=141771314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:82:41:0,82,1451:0,82,255:40,0 chr2 141773265 . C . PASS END=141773266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:35,0 chr2 141773267 . T . PASS END=141773267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:34,0 chr2 141773268 . C . PASS END=141773303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1319:0,87,255:40,0 chr2 141773304 . A . PASS END=141773304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:39,0 chr2 141773305 . T . PASS END=141773484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:38:0,93,1395:0,97,255:40,0 chr2 141777491 . C . PASS END=141777494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1108:0,87,255:30,0 chr2 141777495 . T . PASS END=141777495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 141777496 . A . PASS END=141777658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:31:0,81,1215:0,93,255:40,0 chr2 141777659 . A . PASS END=141777667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:31:0,63,945:0,93,255:26,0 chr2 141777668 . A . PASS END=141777668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,947:0,45,255:21,0 chr2 141777669 . G . PASS END=141777669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:7:28:0,7,922:0,7,255:19,0 chr2 141777670 . A . PASS END=141777670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:20,0 chr2 141777671 . T . PASS END=141777671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 141806555 . C . PASS END=141806791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:45:0,120,1800:0,122,255:40,0 chr2 141812685 . T . PASS END=141812815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:32:0,80,1120:0,80,255:40,0 chr2 141812816 . G . PASS END=141812828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,65,255:26,0 chr2 141816452 . C . PASS END=141816583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:92:0,120,1800:0,243,255:40,0 chr2 141816584 . A . PASS END=141816620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:70:0,120,1800:0,177,255:40,0 chr2 141816621 . A G, 253.29 PASS DP=69;MQ=249.99;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,29,0:0,40,0:203:291,206,0,2580,206,2580:255,210,0:0,0:2.5329e+02,2.0329e+02,0.0000e+00,4.5000e+02,2.3806e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,46:0,0,39,30 chr2 141816622 . A . PASS END=141816623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 141819620 . T . PASS END=141819625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,886:0,62,255:26,0 chr2 141819626 . G . PASS END=141819626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 141819627 . C . PASS END=141819627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 141819628 . C . PASS END=141819643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:30:0,86,1080:0,86,255:32,0 chr2 141819644 . T . PASS END=141819644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr2 141819645 . C . PASS END=141819813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:34:0,81,1215:0,85,255:40,0 chr2 141819814 . C . PASS END=141819826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,945:0,63,255:24,0 chr2 141819827 . A . PASS END=141819828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 141819829 . T . PASS END=141819830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 141819831 . A . PASS END=141819831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 141819832 . A . PASS END=141819832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,712:0,19,255:17,0 chr2 141819833 . G . PASS END=141819836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,707:0,49,255:19,0 chr2 141819837 . A . PASS END=141819837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,635:0,16,255:14,0 chr2 141819838 . G . PASS END=141819842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,666:0,44,255:17,0 chr2 141945990 . C . PASS END=141945990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:26,0 chr2 141945991 . C . PASS END=141946152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:31:0,90,1291:0,93,255:40,0 chr2 141986752 . T . PASS END=141986998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:81:47:0,81,1215:0,107,255:40,0 chr2 141986999 . A . PASS END=141987009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:71:29:0,71,1039:0,71,255:25,0 chr2 142004795 . C . PASS END=142004923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:35:0,90,1350:0,100,255:40,0 chr2 142012091 . C . PASS END=142012210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:60:0,120,1800:0,148,255:40,0 chr2 142237965 . C . PASS END=142238102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:89:34:0,89,1272:0,89,255:40,0 chr2 142567848 . A . PASS END=142567872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,115,1800:0,115,255:40,0 chr2 142567873 . A . PASS END=142567909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,143,255:40,0 chr2 142567910 . T C, 50.00 PASS DP=70;MQ=249.20;MQRankSum=7.082;ReadPosRankSum=4.805;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,41,0:0.586,0.000:70:14,18,0:15,23,0:47:85,0,47,1466,1021,2488:255,0,255:26,0:5.0000e+01,8.2318e-05,5.0471e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,12,17,24:14,15,30,11 chr2 142567911 . G . PASS END=142567947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,171,255:40,0 chr2 142567948 . A . PASS END=142567970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,117,1755:0,132,255:40,0 chr2 142888217 . C . PASS END=142888298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,120,1800:0,124,255:40,0 chr2 143634576 . G . PASS END=143634576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 143642937 . A . PASS END=143642937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 143642938 . T . PASS END=143642949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,225:0,18,225:6,0 chr2 143642950 . C . PASS END=143642962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,250:0,24,250:8,0 chr2 143642963 . G . PASS END=143642967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 143642968 . A . PASS END=143643034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,527:0,42,255:19,0 chr2 143643035 . A . PASS END=143643074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:23,0 chr2 143643075 . T . PASS END=143643075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 143643076 . A . PASS END=143643084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 143643085 . A . PASS END=143643096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,621:0,47,255:17,0 chr2 143643097 . T . PASS END=143643097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 143643098 . G . PASS END=143643102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:17,0 chr2 143643103 . C . PASS END=143643105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 143676177 . G . PASS END=143676189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:77:0,120,1800:0,196,255:40,0 chr2 143676190 . T . PASS END=143676298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:79:0,120,1800:0,224,255:40,0 chr2 143685228 . A . PASS END=143685310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:39:0,97,1482:0,97,255:40,0 chr2 143704678 . C . PASS END=143704751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,114,1710:0,127,255:40,0 chr2 143712379 . G . PASS END=143712440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:66:0,120,1800:0,160,255:40,0 chr2 143713772 . T . PASS END=143713843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:79:0,120,1800:0,212,255:40,0 chr2 143715210 . T . PASS END=143715284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,185,255:40,0 chr2 143718193 . G . PASS END=143718209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,111,1366:0,111,255:40,0 chr2 143718210 . A . PASS END=143718244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:97:47:0,97,1530:0,97,255:40,0 chr2 143718245 . G . PASS END=143718245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,8:67:68:67:0,68,1885:0,68,255:40,0 chr2 143718246 . A . PASS END=143718246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 143718247 . G . LowGQ END=143718247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,11:67:0:67:0,0,1601:71,0,255:40,0 chr2 143718248 . A . PASS END=143718284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,112,1800:0,112,255:40,0 chr2 143718285 . T . PASS END=143718339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:46:0,102,1530:0,124,255:40,0 chr2 143722222 . G . PASS END=143722230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1328:0,100,255:39,0 chr2 143724883 . C . PASS END=143724897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,212,255:40,0 chr2 143728740 . G . PASS END=143728747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1373:0,105,255:36,0 chr2 143728748 . A . PASS END=143728748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1289:0,75,255:34,0 chr2 143728749 . C . PASS END=143728772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:39:0,92,1445:0,92,255:39,0 chr2 143742653 . G . PASS END=143742751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,129,255:40,0 chr2 143743517 . T . PASS END=143743590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:69:0,120,1800:0,197,255:40,0 chr2 143746414 . G . PASS END=143746435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,239,255:40,0 chr2 143787196 . A . PASS END=143787198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:81:0,120,1800:0,196,255:40,0 chr2 143787199 . A . PASS END=143787236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:83:0,120,1800:0,194,255:40,0 chr2 143787237 . A . PASS END=143787248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,254,255:40,0 chr2 143790805 . A . PASS END=143790890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:67:0,120,1800:0,153,255:40,0 chr2 143797997 . A . PASS END=143798227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,100,1710:0,100,255:40,2 chr2 143799616 . T . PASS END=143799741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:47:0,110,1800:0,110,255:40,0 chr2 143887000 . A . PASS END=143887035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,209,255:40,0 chr2 143913060 . A . PASS END=143913188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,102,255:40,0 chr2 143913189 . A . PASS END=143913194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:25,0 chr2 143913195 . C . PASS END=143913224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,46,255:18,0 chr2 143959703 . A . PASS END=143959771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:99:61:0,120,1800:0,183,255:40,0 chr2 143973953 . A . PASS END=143974014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,191,255:40,2 chr2 143986150 . G . PASS END=143986237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:96:40:0,96,1440:0,120,255:40,0 chr2 143993515 . A . PASS END=143993547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,133,255:40,0 chr2 144004824 . A . PASS END=144004824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 144004825 . T . PASS END=144004825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 144004826 . G . PASS END=144004837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,776:0,63,255:26,0 chr2 144004838 . G . PASS END=144004838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:26,0 chr2 144004839 . C . PASS END=144004843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 144004844 . T . PASS END=144004844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 144004845 . G . PASS END=144004852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 144004853 . G . PASS END=144004853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 144004854 . A . PASS END=144004866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:30,0 chr2 144004867 . C . PASS END=144004867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 144004868 . C . PASS END=144004917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:30:0,89,1066:0,89,255:39,0 chr2 144004918 . T . PASS END=144004918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1333:0,65,255:36,0 chr2 144004919 . C . PASS END=144004929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,104,1463:0,104,255:37,0 chr2 144004930 . G . PASS END=144004930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr2 144004931 . G . PASS END=144004946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1215:0,98,255:37,0 chr2 144004947 . G . PASS END=144004965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr2 144004966 . T . PASS END=144004966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 144004967 . T . PASS END=144004971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:23,0 chr2 144004972 . C . PASS END=144004973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:19,0 chr2 144008080 . A . PASS END=144008169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,145,255:40,0 chr2 144193170 . A . PASS END=144193171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:64:0,120,1800:0,142,255:40,0 chr2 144193172 . C . PASS END=144193172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,6:67:79:67:0,79,1971:0,79,255:40,0 chr2 144193173 . A . PASS END=144193202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:92:67:0,92,1800:0,92,255:40,0 chr2 144193203 . C . PASS END=144193268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:86:0,120,1800:0,208,255:40,0 chr2 144194482 . C . PASS END=144194611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:47:0,105,1646:0,105,255:40,0 chr2 144244942 . T . PASS END=144245064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:35:0,87,1498:0,87,255:40,2 chr2 144276835 . A . PASS END=144276933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,104,1523:0,104,255:40,0 chr2 144290822 . G . PASS END=144290922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,134,255:40,0 chr2 144313977 . G . PASS END=144314054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:76:0,120,1800:0,196,255:40,0 chr2 144345255 . T . PASS END=144345256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 144345257 . G . PASS END=144345257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 144345258 . T . PASS END=144345260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,354:0,36,255:13,0 chr2 144345261 . C . PASS END=144345261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:13,0 chr2 144345262 . T . PASS END=144345266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,415:0,42,255:14,0 chr2 144345267 . T . PASS END=144345267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 144345268 . A . PASS END=144345268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr2 144345269 . C . LowGQ END=144345269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,316:8,0,255:11,0 chr2 144345270 . C . PASS END=144345275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:14,0 chr2 144345276 . T . PASS END=144345276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,406:0,11,255:13,0 chr2 144345277 . T . PASS END=144345278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 144345279 . T . PASS END=144345279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:13,0 chr2 144345280 . A . PASS END=144345281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 144345282 . C . PASS END=144345282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,467:0,14,255:14,0 chr2 144345283 . A . PASS END=144345283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 144345284 . G . PASS END=144345284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:14,0 chr2 144345285 . A . PASS END=144345286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 144345287 . C . PASS END=144345287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 144345288 . T . LowGQ END=144345288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,447:2,0,255:13,0 chr2 144345289 . G . PASS END=144345289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,504:0,18,255:15,0 chr2 144345290 . G . PASS END=144345290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 144345291 . A . PASS END=144345291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr2 144345292 . T . PASS END=144345292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 144345293 . G . PASS END=144345293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,525:0,18,255:14,0 chr2 144345294 . G . PASS END=144345294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 144345295 . A . PASS END=144345295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:13,0 chr2 144345296 . G . PASS END=144345296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 144345297 . A . PASS END=144345298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,523:0,15,255:15,0 chr2 144345299 . C . PASS END=144345299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 144345300 . T . PASS END=144345300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:15,0 chr2 144345301 . G . PASS END=144345302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 144345303 . G . PASS END=144345303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 144345304 . G . PASS END=144345313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 144345314 . G . PASS END=144345315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 144345316 . A . PASS END=144345323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr2 144345324 . G . PASS END=144345325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 144345326 . T . PASS END=144345334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 144345335 . G . PASS END=144345335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 144345336 . T . PASS END=144345336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 144345337 . G . PASS END=144345337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 144345338 . G . PASS END=144345345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,612:0,48,255:16,0 chr2 144345346 . A . PASS END=144345346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 144371692 . C . PASS END=144371717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:73:0,120,1800:0,197,255:40,0 chr2 144381702 . A . PASS END=144381768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:86:31:0,86,1095:0,86,255:40,0 chr2 144381769 . G . PASS END=144381769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1506:0,77,255:40,0 chr2 144381770 . T . PASS END=144381833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:32:0,87,1305:0,94,255:40,0 chr2 144381834 . T . PASS END=144381836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:22,0 chr2 144460988 . A . PASS END=144461093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:37:0,81,1324:0,81,255:40,0 chr2 144463121 . G . PASS END=144463157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,207,255:40,0 chr2 144492214 . T . PASS END=144492240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,172,255:40,0 chr2 144525558 . G . PASS END=144525570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 144525571 . G . PASS END=144525571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 144525572 . C . PASS END=144525579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,837:0,69,255:23,0 chr2 144525580 . A . PASS END=144525580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,689:0,36,255:20,0 chr2 144525581 . A . PASS END=144525598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,857:0,62,255:26,0 chr2 144525599 . G . PASS END=144525608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 144525609 . T . PASS END=144525609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 144525610 . G . PASS END=144525620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 144525621 . T . PASS END=144525621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 144525622 . A . PASS END=144525644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1170:0,90,255:31,0 chr2 144525645 . A . PASS END=144525645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 144525646 . A . PASS END=144525688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:30:0,86,1080:0,86,255:32,0 chr2 144525689 . C . PASS END=144525698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,900:0,74,255:24,0 chr2 144525699 . G . PASS END=144525699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:20,0 chr2 144525700 . C . PASS END=144525704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:22,0 chr2 144525705 . T . PASS END=144525708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,69,255:19,0 chr2 144525709 . T . PASS END=144525709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:17,0 chr2 144525710 . A . PASS END=144525717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:17:0,50,637:0,50,255:17,0 chr2 144525718 . A . PASS END=144525718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:16,0 chr2 144525719 . T . PASS END=144525725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,576:0,51,255:17,0 chr2 144525726 . C . PASS END=144525726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 144525727 . T . PASS END=144525736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 144525737 . A . PASS END=144525737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 144525738 . C . PASS END=144525738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 144525739 . T . PASS END=144525741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 144704619 . T . PASS END=144704702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,107,1480:0,107,255:40,0 chr2 144709549 . C . PASS END=144709640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:69:0,120,1800:0,183,255:40,0 chr2 144710340 . C . PASS END=144710410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:37:0,96,1440:0,104,255:40,0 chr2 144714762 . A . PASS END=144714906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:82:32:0,82,1126:0,82,255:40,0 chr2 144728220 . C . PASS END=144728329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,101,1738:0,101,255:40,0 chr2 144764745 . T . PASS END=144765074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:81:33:0,81,1215:0,87,255:40,0 chr2 144765075 . A . PASS END=144765079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:20,0 chr2 144765080 . T . PASS END=144765090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:20:0,42,630:0,60,255:18,0 chr2 144765091 . T . PASS END=144765102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr2 144769235 . C . PASS END=144769255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,128,255:40,0 chr2 144769256 . G . PASS END=144769381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:40:0,102,1530:0,112,255:40,0 chr2 144899449 . C . PASS END=144899521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:80:37:0,80,1530:0,80,255:40,0 chr2 144899522 . T . PASS END=144899558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,167,255:40,0 chr2 144899559 . C A, 50.00 PASS DP=62;MQ=250.00;MQRankSum=6.701;ReadPosRankSum=4.855;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,35,0:0.565,0.000:62:17,17,0:10,18,0:48:85,0,49,1248,957,2205:255,0,255:27,0:5.0000e+01,7.3776e-05,5.1549e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,21,14:13,14,17,18 chr2 144899560 . A . PASS END=144899596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,158,255:40,0 chr2 144899597 . T . PASS END=144899622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,100,1676:0,100,255:40,0 chr2 144903139 . C . PASS END=144903306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:34:0,86,1152:0,86,255:40,0 chr2 144934702 . C . PASS END=144934776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:39:0,89,1372:0,89,255:40,0 chr2 144934777 . G . PASS END=144934784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,97,255:32,0 chr2 144936506 . C . PASS END=144936527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1352:0,100,255:40,0 chr2 144966170 . C . PASS END=144966173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,895:0,78,255:26,0 chr2 144966174 . A . PASS END=144966174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:24,0 chr2 144966175 . A . PASS END=144966189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1027:0,84,255:36,0 chr2 144966190 . A . PASS END=144966190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1278:0,53,255:34,0 chr2 144966191 . A . PASS END=144966202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1299:0,84,255:39,0 chr2 144966203 . A . PASS END=144966203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1321:0,79,255:39,0 chr2 144966204 . A . PASS END=144966371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:90:34:0,90,1350:0,95,255:40,0 chr2 144968085 . C . PASS END=144968088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:88:0,120,1800:0,255,255:40,0 chr2 145123132 . T . PASS END=145123138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1047:0,84,255:29,0 chr2 145123139 . C . PASS END=145123141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 145123142 . C . PASS END=145123146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 145123147 . G . PASS END=145123147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 145123148 . A . PASS END=145123151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 145123152 . A . PASS END=145123176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,65,255:26,0 chr2 145123177 . G . PASS END=145123193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,59,255:19,0 chr2 145142172 . C . LowGQ END=145142172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,18:70:0:70:0,0,1033:255,0,255:40,26 chr2 145144492 . G . PASS END=145144492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,86:2,0 chr2 145144612 . G . PASS END=145144612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,100:0,9,100:3,0 chr2 145144621 . T . PASS END=145144621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,72:0,9,72:3,0 chr2 145144629 . T . PASS END=145144629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 145145033 . T . PASS END=145145033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 145145072 . C . PASS END=145145072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1117:0,80,255:30,0 chr2 145145221 . C . PASS END=145145221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr2 145145898 . G . PASS END=145145898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:94:0,120,1800:0,255,255:40,0 chr2 145146442 . T . PASS END=145146449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:83:0,120,1800:0,233,255:40,0 chr2 145146457 . G . LowGQ END=145146457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,23:80:0:80:0,0,1343:255,0,255:40,31 chr2 145146503 . G . LowGQ END=145146503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,9:63:0:63:0,0,1571:108,0,255:40,10 chr2 145146942 . T . PASS END=145147318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:85:33:0,85,1350:0,85,255:40,5 chr2 145147319 . C . PASS END=145147319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1123:0,66,255:29,0 chr2 145147320 . T . PASS END=145147320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 145147321 . C . PASS END=145147321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:28,0 chr2 145147322 . T . PASS END=145147328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:29,0 chr2 145147329 . A . PASS END=145147329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr2 145147330 . A . PASS END=145147330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1061:0,38,255:27,0 chr2 145147331 . G . PASS END=145147344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 145147345 . C . PASS END=145147351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1078:0,74,255:26,0 chr2 145147352 . G . PASS END=145147353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 145147354 . G . PASS END=145147368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:28:0,74,1086:0,74,255:26,0 chr2 145147369 . T . PASS END=145147369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr2 145147370 . T . PASS END=145147381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:27:0,65,984:0,65,255:26,0 chr2 145147382 . T . PASS END=145147382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr2 145147383 . C . PASS END=145147391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,911:0,78,255:26,0 chr2 145147392 . C . PASS END=145147393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 145147394 . G . PASS END=145147411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:28:0,60,900:0,71,255:26,0 chr2 145147412 . T . PASS END=145147420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:24:0,51,765:0,68,255:19,0 chr2 145147421 . C . PASS END=145147455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr2 145147456 . C . PASS END=145147456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr2 145147457 . G . PASS END=145147470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 145147471 . G . PASS END=145147471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr2 145147472 . A . PASS END=145147500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:25,0 chr2 145147501 . G . PASS END=145147560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1005:0,80,255:31,0 chr2 145147561 . T . PASS END=145147562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 145147563 . T . PASS END=145147563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,865:0,45,255:25,0 chr2 145147564 . C . PASS END=145147577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 145147578 . A . PASS END=145147581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,855:0,75,255:19,0 chr2 145147582 . A . PASS END=145147585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:20,0 chr2 145147586 . G . PASS END=145147586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 145147587 . G . PASS END=145147587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 145147588 . T . PASS END=145147588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 145147589 . C . PASS END=145147589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 145147590 . T . PASS END=145147590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 145147591 . T . PASS END=145147595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 145148155 . T . PASS END=145148168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1395:0,98,255:36,0 chr2 145152007 . T . PASS END=145152047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:57:0,120,1800:0,171,255:40,0 chr2 145153978 . C . PASS END=145154159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:30:0,84,1119:0,90,255:40,0 chr2 145155864 . T . PASS END=145155864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 145155868 . C . PASS END=145155868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 145155869 . T . PASS END=145155871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 145155872 . A . PASS END=145155877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 145155878 . T . PASS END=145155900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:24,0 chr2 145155901 . T . PASS END=145155901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 145155902 . T . PASS END=145155908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 145155909 . T . PASS END=145155909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 145155910 . A . PASS END=145155917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr2 145155918 . A . PASS END=145155918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr2 145155919 . A . PASS END=145155925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:26,0 chr2 145155926 . G . PASS END=145155928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:30,0 chr2 145155929 . C . PASS END=145155929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr2 145155930 . C . PASS END=145157192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:82:30:0,82,1080:0,82,255:40,0 chr2 145157193 . C . PASS END=145157207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:29:0,69,1035:0,87,255:26,0 chr2 145157208 . C . PASS END=145157232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:32,0 chr2 145157233 . A . PASS END=145157233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:30,0 chr2 145157234 . T . PASS END=145157376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1233:0,80,255:40,0 chr2 145157377 . C . PASS END=145157377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1426:0,57,255:38,0 chr2 145157378 . T . PASS END=145157912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:31:0,80,1177:0,80,255:40,0 chr2 145158761 . C . PASS END=145158761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 145158766 . C . PASS END=145158876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:48:0,117,1755:0,124,255:40,0 chr2 145158878 . T . PASS END=145158878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,117,1755:0,144,255:39,0 chr2 145161480 . C . PASS END=145161480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 145161483 . C . PASS END=145161484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,629:0,54,255:18,0 chr2 145161485 . G . PASS END=145161499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:22,0 chr2 145161500 . T . PASS END=145161500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 145161501 . G . PASS END=145161507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 145161508 . A . PASS END=145161508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 145161509 . C . PASS END=145161516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,886:0,75,255:25,0 chr2 145161517 . C . PASS END=145161517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 145161518 . G . PASS END=145161521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr2 145161522 . G . PASS END=145161529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:32,0 chr2 145161530 . T . PASS END=145161530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:31,0 chr2 145161531 . G . PASS END=145161605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:33:0,93,1311:0,99,255:40,0 chr2 145161606 . C . PASS END=145161606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1171:0,73,255:35,0 chr2 145161607 . T . PASS END=145161625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1305:0,104,255:38,0 chr2 145161626 . G . PASS END=145161626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 145161627 . C . PASS END=145161628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr2 145161629 . T . PASS END=145161630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr2 145161631 . T . PASS END=145161649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 145161650 . G . PASS END=145161658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:25,0 chr2 145161659 . G . PASS END=145161659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,909:0,42,255:22,0 chr2 145161660 . C . PASS END=145161686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 145161687 . A . PASS END=145161687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 145161688 . G . PASS END=145161692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 145161693 . C . PASS END=145161697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:18,0 chr2 145162396 . G . PASS END=145162396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 145162403 . C . PASS END=145162423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,684:0,51,255:19,0 chr2 145162424 . C . PASS END=145162427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 145162428 . T . PASS END=145162428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 145162429 . G . PASS END=145162429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 145162430 . G . PASS END=145162430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 145162431 . C . PASS END=145162437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 145162438 . A . PASS END=145162438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 145162439 . G . PASS END=145162440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 145162441 . C . PASS END=145162441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 145162442 . G . PASS END=145162454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:24,0 chr2 145162455 . A . PASS END=145162455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 145162456 . G . PASS END=145162463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 145162464 . T . PASS END=145162464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 145162465 . G . PASS END=145162469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,984:0,78,255:26,0 chr2 145162470 . A . PASS END=145162471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 145162472 . T . PASS END=145162472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 145162473 . A . PASS END=145162478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 145162479 . T . PASS END=145162479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,999:0,48,255:28,0 chr2 145162480 . G . PASS END=145162557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1141:0,90,255:36,0 chr2 145162558 . T . PASS END=145162558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr2 145162559 . C . PASS END=145162584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1210:0,96,255:32,0 chr2 145162585 . T . PASS END=145162591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 145182354 . A . PASS END=145182354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 145182363 . C . PASS END=145182434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,182,255:40,0 chr2 145182440 . G . PASS END=145182440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 145182483 . C . PASS END=145182520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:61:0,120,1800:0,173,255:40,0 chr2 145187335 . C . PASS END=145187341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 145187342 . C . PASS END=145187353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:21:0,63,806:0,63,255:26,0 chr2 145187354 . C . PASS END=145187376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:31,0 chr2 145187377 . C . PASS END=145187378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr2 145187379 . G . PASS END=145187403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1196:0,92,255:35,0 chr2 145187404 . A . PASS END=145187404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:33,0 chr2 145187405 . T . PASS END=145187420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1244:0,92,255:37,0 chr2 145187421 . C . PASS END=145187421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:35,0 chr2 145187422 . T . PASS END=145187584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:35:0,81,1215:0,86,255:40,0 chr2 145187585 . A . PASS END=145187593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,86,255:26,0 chr2 145187596 . G . PASS END=145187596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:25,0 chr2 145221857 . T . PASS END=145221909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,102,1391:0,102,255:40,0 chr2 145255279 . C . PASS END=145255331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:35:0,93,1252:0,93,255:40,0 chr2 145271261 . T . PASS END=145271266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 145271267 . G . PASS END=145271280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,80,255:26,0 chr2 145271281 . C . PASS END=145271281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 145271282 . T . PASS END=145271282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr2 145271283 . T . PASS END=145271287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 145271288 . A . PASS END=145271297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:29,0 chr2 145271298 . G . PASS END=145271298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 145271299 . G . PASS END=145271300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 145271301 . C . PASS END=145271301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:31,0 chr2 145271302 . C . PASS END=145271329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:33:0,89,1257:0,89,255:37,0 chr2 145271330 . T . PASS END=145271330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:31,0 chr2 145271331 . C . PASS END=145271354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1081:0,80,255:33,0 chr2 145271355 . G . PASS END=145271364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr2 145274083 . T . PASS END=145274083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr2 145274084 . C . PASS END=145274086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr2 145274087 . C . PASS END=145274087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 145274088 . C . PASS END=145274088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 145274089 . T . PASS END=145274089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 145274090 . G . PASS END=145274106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,584:0,51,255:19,0 chr2 145274107 . A . PASS END=145274108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:21:20:0,21,612:0,21,255:18,0 chr2 145274109 . A . PASS END=145274120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:19:0,42,630:0,44,255:19,0 chr2 145274839 . T . PASS END=145274839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,113,1249:0,113,255:38,0 chr2 145274843 . A . PASS END=145274843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1355:0,81,255:36,0 chr2 145274845 . C . PASS END=145274986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1260:0,86,255:40,0 chr2 145274987 . C . PASS END=145274987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 145275226 . A . PASS END=145275236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1010:0,82,255:33,0 chr2 145275237 . G . PASS END=145275237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1018:0,69,255:32,0 chr2 145275238 . A . PASS END=145275242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1097:0,85,255:34,0 chr2 145275243 . T . PASS END=145275243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,931:0,60,255:32,0 chr2 145275701 . C . PASS END=145275701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 145275702 . T . PASS END=145275702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,202:0,7,202:7,0 chr2 145275703 . C . PASS END=145275705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 145275706 . T . PASS END=145275706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 145275707 . C . PASS END=145275709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 145275710 . A . PASS END=145275710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 145275711 . C . PASS END=145275714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,282:0,27,255:9,0 chr2 145275715 . T . PASS END=145275715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr2 145277506 . C . PASS END=145277557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:77:0,120,1800:0,209,255:40,0 chr2 147596973 . A G, 98.16 PASS DP=17;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,17,0:1.000,0.000:17:0,8,0:0,9,0:48:136,51,0,651,51,651:255,51,0:0,0:9.8162e+01,4.8162e+01,6.6269e-05,4.5000e+02,8.2932e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,10:0,0,10,7 chr2 148602722 . A . PASS END=148602745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,120,1800:0,127,255:40,0 chr2 148602746 . T . PASS END=148602746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:51:45:0,51,1080:0,51,255:39,0 chr2 148602747 . T . PASS END=148602776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:93:44:0,93,1560:0,93,255:40,0 chr2 148653870 . G . PASS END=148654077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:38:0,101,1426:0,101,255:40,0 chr2 148657027 . G . PASS END=148657079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:69:0,120,1800:0,186,255:40,0 chr2 148657080 . A . PASS END=148657116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,230,255:40,0 chr2 148657117 . G A, 47.44 PASS DP=92;MQ=250.00;MQRankSum=8.132;ReadPosRankSum=3.675;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:54,38,0:0.413,0.000:92:28,22,0:26,16,0:46:82,0,50,1348,1894,3242:255,0,255:40,0:4.7444e+01,9.9921e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,28,20,18:28,26,18,20 chr2 148657118 . G . PASS END=148657136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:71:0,120,1800:0,213,255:40,0 chr2 148657313 . C . PASS END=148657467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:43:0,111,1665:0,129,255:40,1 chr2 148672760 . G . PASS END=148672903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:33:0,84,1233:0,99,255:40,0 chr2 148674852 . G . PASS END=148674995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,114,1710:0,134,255:40,0 chr2 148676016 . G . PASS END=148676017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1210:0,86,255:31,0 chr2 148676018 . T . PASS END=148676018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1028:0,46,255:31,0 chr2 148676019 . T . PASS END=148676031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:33:0,83,1202:0,83,255:39,0 chr2 148676032 . T . PASS END=148676032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:59:40:0,59,1388:0,59,255:38,0 chr2 148676033 . T . PASS END=148676039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,113,1377:0,113,255:40,0 chr2 148676040 . G . PASS END=148676040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:40,0 chr2 148676041 . C . PASS END=148676161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:42:0,97,1575:0,97,255:40,0 chr2 148677799 . G . PASS END=148677913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,111,1665:0,138,255:40,0 chr2 148680542 . G . PASS END=148680680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:36:0,102,1495:0,108,255:40,0 chr2 148683600 . G . PASS END=148683656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,117,1755:0,123,255:40,0 chr2 148683657 . T . PASS END=148683693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:55:0,88,1800:0,88,255:40,3 chr2 148683694 . G A, 48.50 PASS DP=54;MQ=250.00;MQRankSum=6.139;ReadPosRankSum=0.390;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,21,0:0.389,0.000:54:14,15,0:19,6,0:46:83,0,47,183,183,183:255,0,255:29,3:4.8499e+01,1.0484e-04,5.0000e+01,1.8327e+02,2.1804e+02,1.8628e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,22,9,12:14,19,11,10 chr2 148683695 . A . PASS END=148683730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:46:0,85,1665:0,85,255:40,0 chr2 148684649 . G . PASS END=148684652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,922:0,62,255:24,0 chr2 148684653 . T . PASS END=148684658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 148684659 . T . PASS END=148684662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:29,0 chr2 148684663 . C . PASS END=148684664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1162:0,93,255:31,0 chr2 148684665 . G . PASS END=148684665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 148684666 . T . PASS END=148684843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:31:0,84,1249:0,89,255:40,0 chr2 148693079 . T . PASS END=148693081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 148693082 . T . PASS END=148693082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 148693083 . A . PASS END=148693091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr2 148693092 . A . PASS END=148693104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1154:0,89,255:36,0 chr2 148693105 . C . PASS END=148693105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1202:0,61,255:34,0 chr2 148693106 . C . PASS END=148693267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:36:0,102,1297:0,102,255:40,0 chr2 148695715 . C . PASS END=148695782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,178,255:40,0 chr2 148695867 . C . PASS END=148695962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:76:0,120,1800:0,206,255:40,0 chr2 148696709 . C . PASS END=148696817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:34:0,99,1485:0,102,255:40,0 chr2 148701005 . C . PASS END=148701050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:88:0,120,1800:0,179,255:40,0 chr2 148701051 . T . PASS END=148701085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,3:89:93:68:0,93,1485:0,93,255:40,0 chr2 148701086 . G . PASS END=148701086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:76:68:0,76,1978:0,76,255:28,0 chr2 148701087 . A . PASS END=148701087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:90:68:0,90,1350:0,170,255:28,0 chr2 148701088 . G . PASS END=148701088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,7:67:26:67:0,26,1762:0,26,255:26,0 chr2 148701089 . A . PASS END=148701091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,4:66:84:66:0,84,1260:0,95,255:26,0 chr2 148701095 . A . PASS END=148701095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:81:62:0,81,1215:0,170,255:26,0 chr2 148705620 . C . PASS END=148705793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:56:0,120,1800:0,135,255:40,1 chr2 148709942 . C . PASS END=148710093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:89:32:0,89,1311:0,89,255:40,0 chr2 148712916 . C . PASS END=148712964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:79:0,120,1800:0,217,255:40,0 chr2 148715867 . A . PASS END=148715952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:56:0,120,1800:0,130,255:40,0 chr2 148716360 . C . PASS END=148716390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:79:0,120,1800:0,202,255:40,0 chr2 148716391 . C . PASS END=148716427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:69:0,120,1800:0,191,255:40,0 chr2 148716428 . T C, 47.40 PASS DP=69;MQ=249.99;MQRankSum=6.972;ReadPosRankSum=3.670;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,28,0:0.412,0.000:68:16,11,0:24,17,0:46:82,0,50,986,1401,2388:255,0,255:33,0:4.7396e+01,1.0096e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,23,14,14:23,17,17,11 chr2 148716429 . T . PASS END=148716435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:62:0,120,1800:0,135,255:40,1 chr2 148730308 . C . PASS END=148730398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,117,1755:0,132,255:40,0 chr2 148731017 . T . PASS END=148731093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:55:0,120,1800:0,166,255:40,0 chr2 148733471 . C . PASS END=148733505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,213,255:40,0 chr2 148733506 . T . PASS END=148733527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:71:0,105,1575:0,213,255:40,0 chr2 148936370 . G . PASS END=148936370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr2 149099869 . C . PASS END=149099869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 149216328 . A . PASS END=149216372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:96:44:0,96,1500:0,96,255:40,0 chr2 149216373 . C . PASS END=149216415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:96:59:0,96,1704:0,96,255:40,0 chr2 149216416 . A . PASS END=149216416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:67:56:0,67,1392:0,67,255:40,0 chr2 149216417 . T . PASS END=149216422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:55:0,84,1557:0,84,255:40,0 chr2 149216423 . T . LowGQ END=149216423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:0:55:0,0,1426:10,0,255:40,0 chr2 149216424 . G . PASS END=149216433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:51:0,81,1469:0,81,255:40,0 chr2 149216434 . A . PASS END=149216434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1533:0,67,255:40,0 chr2 149216435 . T . PASS END=149216440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:45:0,101,1373:0,101,255:40,0 chr2 149217788 . A . PASS END=149217791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:83:0,120,1800:0,216,255:40,0 chr2 149220149 . A . PASS END=149220149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:44:0,94,1574:0,94,255:40,0 chr2 149220151 . T . PASS END=149220253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:50:0,120,1800:0,132,255:40,0 chr2 149221307 . G . PASS END=149221319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1172:0,83,255:37,0 chr2 149221320 . G . PASS END=149221320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:36,0 chr2 149221321 . A . PASS END=149221486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:36:0,90,1350:0,107,255:40,0 chr2 149221487 . A . PASS END=149221489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1035:0,108,255:26,0 chr2 149225910 . A . PASS END=149225916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1295:0,84,255:40,0 chr2 149225917 . T . PASS END=149225917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1537:0,77,255:40,0 chr2 149225918 . C . PASS END=149226267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:36:0,91,1260:0,91,255:40,0 chr2 149226268 . A . PASS END=149226268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1118:0,75,255:33,0 chr2 149226269 . A . PASS END=149226569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:33:0,82,1117:0,82,255:40,0 chr2 149226570 . C . PASS END=149226570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:30,0 chr2 149226571 . T . PASS END=149226578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:33:0,84,1225:0,86,255:29,0 chr2 149226579 . A . PASS END=149226580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1011:0,66,255:29,0 chr2 149226581 . C . PASS END=149226603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1109:0,80,255:32,0 chr2 149226604 . T . PASS END=149226604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:28,0 chr2 149226605 . C . PASS END=149226610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,89,255:29,0 chr2 149226611 . A . PASS END=149226611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1108:0,44,255:28,0 chr2 149226612 . A . PASS END=149226617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 149226618 . T . PASS END=149226618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1050:0,57,255:29,0 chr2 149226619 . G . PASS END=149226635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1202:0,83,255:31,0 chr2 149226636 . T . PASS END=149226636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1186:0,61,255:31,0 chr2 149226637 . C . PASS END=149226639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:34,0 chr2 149226640 . T . PASS END=149226640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1218:0,61,255:32,0 chr2 149226641 . A . PASS END=149226643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1195:0,89,255:35,0 chr2 149226644 . C . PASS END=149226644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1247:0,67,255:34,0 chr2 149226645 . C . PASS END=149226652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1271:0,81,255:36,0 chr2 149226653 . T . PASS END=149226653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1257:0,64,255:33,0 chr2 149226654 . T . PASS END=149227594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1202:0,83,255:40,0 chr2 149227595 . T . PASS END=149227595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1026:0,60,255:31,0 chr2 149227596 . C . PASS END=149227819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:80:31:0,80,1116:0,80,255:40,0 chr2 149227820 . C . PASS END=149227820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:29,0 chr2 149227821 . A . PASS END=149227848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1350:0,95,255:37,0 chr2 149227849 . T . PASS END=149227849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1186:0,64,255:34,0 chr2 149227850 . C . PASS END=149228068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:38:0,81,1215:0,87,255:40,0 chr2 149240679 . G . PASS END=149240680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 149240681 . G . PASS END=149240681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 149240682 . G . PASS END=149240686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1217:0,89,255:35,0 chr2 149240687 . G . PASS END=149240689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:35,0 chr2 149240690 . C . PASS END=149240703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1216:0,84,255:38,0 chr2 149240704 . A . PASS END=149240704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1317:0,73,255:37,0 chr2 149240705 . G . PASS END=149241188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:36:0,87,1305:0,101,255:40,0 chr2 149241189 . T . PASS END=149241189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 149241190 . G . PASS END=149241206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1148:0,90,255:31,0 chr2 149241207 . T . PASS END=149241207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 149241208 . G . PASS END=149241394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1044:0,80,255:39,0 chr2 149241395 . G . PASS END=149241395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 149241396 . C . PASS END=149241407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 149241408 . T . PASS END=149241408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 149241409 . G . PASS END=149241453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:31:0,87,1156:0,89,255:36,0 chr2 149241454 . G . PASS END=149241454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:36,0 chr2 149241455 . G . PASS END=149241675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1260:0,88,255:40,0 chr2 149241676 . T . PASS END=149241681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,99,255:26,0 chr2 149241682 . T . PASS END=149241692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:23:0,42,630:0,59,255:17,0 chr2 149241693 . C . PASS END=149241693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:30:23:0,30,450:0,69,255:10,0 chr2 149241694 . A . PASS END=149241695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 149241696 . G . PASS END=149241704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:12:0,33,495:0,36,255:12,0 chr2 149243311 . G . PASS END=149243314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,953:0,75,255:26,0 chr2 149243315 . T . PASS END=149243315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr2 149243316 . A . PASS END=149243316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 149243317 . T . PASS END=149243318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,966:0,84,255:28,0 chr2 149243319 . T . PASS END=149243319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 149243320 . C . PASS END=149243490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:30:0,84,1086:0,85,255:40,0 chr2 149243491 . C . PASS END=149243494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:33:0,78,1170:0,89,255:26,0 chr2 149243495 . G . PASS END=149243496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 149243497 . C . PASS END=149243519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 149246949 . T . PASS END=149246949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 149246955 . G . PASS END=149247808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:82:30:0,82,1022:0,82,255:40,0 chr2 149247809 . G . PASS END=149247809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 149247810 . C . PASS END=149247825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:92:36:0,92,1332:0,92,255:35,0 chr2 149247826 . A . PASS END=149247826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1079:0,75,255:33,0 chr2 149247827 . G . PASS END=149247865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:36:0,94,1234:0,94,255:40,0 chr2 149247866 . A . PASS END=149247866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1484:0,63,255:40,0 chr2 149247867 . A . PASS END=149248196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,99,1445:0,99,255:40,0 chr2 149259966 . G . PASS END=149260078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,114,1710:0,126,255:40,1 chr2 149263330 . A . PASS END=149263396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:79:0,120,1800:0,168,255:40,3 chr2 149267629 . A . PASS END=149267704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,173,255:40,0 chr2 149270439 . G . PASS END=149270510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:64:0,120,1800:0,180,255:40,0 chr2 149270665 . A . PASS END=149270665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 149402587 . A . PASS END=149402588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 149402589 . G . PASS END=149402594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 149402595 . A . PASS END=149402595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,369:0,6,255:14,0 chr2 149402596 . C . PASS END=149402601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 149402602 . T . PASS END=149402602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr2 149402603 . T . PASS END=149402605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr2 149402606 . G . PASS END=149402606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr2 149402607 . A . PASS END=149402613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 149402614 . G . PASS END=149402614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr2 149402615 . C . PASS END=149402616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr2 149402617 . C . PASS END=149402618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 149402619 . G . PASS END=149402625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 149402626 . G . PASS END=149402627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,565:0,32,255:14,0 chr2 149402628 . C . PASS END=149402628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:13,0 chr2 149402629 . A . PASS END=149402637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:32:14:0,32,565:0,32,255:13,0 chr2 149402638 . C . PASS END=149402655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:19,0 chr2 149402656 . G . PASS END=149402656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 149402657 . A . PASS END=149402659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,645:0,43,255:19,0 chr2 149402660 . T . PASS END=149402667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 149402668 . C . PASS END=149402678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 149402679 . C . PASS END=149402685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr2 149402686 . A . PASS END=149402722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 149402723 . A . PASS END=149402739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr2 149447783 . G . PASS END=149447942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:93:42:0,93,1395:0,110,255:40,1 chr2 149449111 . T . PASS END=149449147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,212,255:40,0 chr2 149449148 . A . PASS END=149449163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,205,255:40,0 chr2 149449190 . G . PASS END=149449222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,198,255:40,0 chr2 149449223 . T . PASS END=149449410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:65:0,120,1800:0,177,255:40,0 chr2 149493630 . A . PASS END=149493675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:94:0,120,1800:0,255,255:40,0 chr2 149501191 . C . PASS END=149501336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:67:0,120,1800:0,193,255:40,0 chr2 149511496 . C . PASS END=149511680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:34:0,90,1350:0,90,255:40,0 chr2 149511681 . A . PASS END=149511681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr2 149511682 . G . PASS END=149511684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 149511685 . A . PASS END=149511685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1049:0,44,255:26,0 chr2 149511686 . A . PASS END=149511691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 149511692 . A . PASS END=149511696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,70,255:26,0 chr2 149511697 . C . PASS END=149511702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,84,255:19,0 chr2 149519351 . A . PASS END=149519499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:99:59:0,120,1800:0,147,255:40,0 chr2 149520239 . A . PASS END=149520251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,145,255:40,0 chr2 149520252 . G . PASS END=149520371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:66:0,120,1800:0,187,255:40,0 chr2 149522524 . C . PASS END=149522689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:40:0,96,1349:0,96,255:40,0 chr2 149522690 . G . PASS END=149522690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1455:0,71,255:36,0 chr2 149522691 . C . PASS END=149522715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1234:0,89,255:39,0 chr2 149526720 . G . PASS END=149526809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,113,1596:0,113,255:40,0 chr2 149528361 . C . PASS END=149528506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:36:0,84,1260:0,101,255:40,0 chr2 149528613 . G . PASS END=149528956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:83:32:0,83,1186:0,83,255:40,0 chr2 149539213 . T . PASS END=149539348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1172:0,83,255:40,0 chr2 149539349 . G . PASS END=149539349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 149541166 . G . PASS END=149541170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 149541171 . A . PASS END=149541317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1108:0,80,255:40,0 chr2 149541318 . G . PASS END=149541325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 149542237 . G . PASS END=149542244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1025:0,84,255:31,0 chr2 149542245 . A . PASS END=149542245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 149542246 . A . PASS END=149542568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:31:0,87,1156:0,91,255:40,0 chr2 149542569 . A . PASS END=149542570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,96,255:25,0 chr2 149543874 . A . PASS END=149543946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:80:0,120,1800:0,188,255:40,0 chr2 149633187 . A . LowGQ END=149633187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,6:19:0:19:0,0,353:65,0,255:13,0 chr2 149633188 . T . PASS END=149633188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:17,0 chr2 149633189 . G . PASS END=149633189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:19,0 chr2 149633190 . G . PASS END=149633190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 149633191 . C . PASS END=149633192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,662:0,30,255:19,0 chr2 149633193 . G . PASS END=149633193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 149633194 . A . LowGQ END=149633194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,579:28,0,255:18,0 chr2 149633195 . T . PASS END=149633195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 149633196 . C . LowGQ END=149633196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,616:19,0,255:18,0 chr2 149633197 . C . PASS END=149633197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,737:0,22,255:19,0 chr2 149633198 . A . PASS END=149633198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:19,0 chr2 149633199 . G . PASS END=149633199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,610:0,3,255:18,0 chr2 149633200 . C . PASS END=149633200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,703:0,30,255:19,0 chr2 149633201 . C . PASS END=149633201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 149633202 . G . LowGQ END=149633203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,582:17,0,255:18,0 chr2 149633204 . A . PASS END=149633204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,747:0,38,255:20,0 chr2 149633205 . T . LowGQ END=149633206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,571:14,0,255:18,0 chr2 149633207 . C . PASS END=149633207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,714:0,36,255:20,0 chr2 149633208 . A . PASS END=149633208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 149633209 . G . PASS END=149633209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,688:0,5,255:20,0 chr2 149633210 . C . PASS END=149633210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 149633211 . A . LowGQ END=149633212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:23:0,0,704:0,0,255:21,0 chr2 149633213 . C . PASS END=149633213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 149633214 . A . PASS END=149633214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 149633215 . A . PASS END=149633215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:24,0 chr2 149633216 . A . PASS END=149633216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 149633217 . G . PASS END=149633217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:20:28:0,20,883:0,20,255:25,0 chr2 149633218 . T . PASS END=149633218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,807:0,12,255:25,0 chr2 149633219 . G . PASS END=149633219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:38:29:0,38,959:0,38,255:26,0 chr2 149633220 . A . PASS END=149633220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,861:0,15,255:25,0 chr2 149633221 . T . PASS END=149633221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr2 149633222 . G . PASS END=149633222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,890:0,37,255:25,0 chr2 149633223 . T . PASS END=149633223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr2 149633224 . G . PASS END=149633224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,928:0,15,255:24,0 chr2 149633225 . C . PASS END=149633226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,942:0,67,255:25,0 chr2 149633227 . G . PASS END=149633228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 149633229 . T . PASS END=149633229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 149633230 . T . PASS END=149633230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 149633231 . C . PASS END=149633232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,992:0,43,255:27,0 chr2 149633233 . G . PASS END=149633238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr2 149633239 . T . PASS END=149633239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,920:0,15,255:25,0 chr2 149633240 . C . PASS END=149633240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 149633241 . A . PASS END=149633241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,901:0,32,255:26,0 chr2 149633242 . A . PASS END=149633243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 149633244 . G . PASS END=149633244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,977:0,18,255:26,0 chr2 149633245 . A . PASS END=149633246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1024:0,71,255:25,0 chr2 149633247 . G . PASS END=149633247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,961:0,32,255:25,0 chr2 149633248 . C . PASS END=149633248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 149633249 . G . PASS END=149633249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:25,0 chr2 149633250 . G . PASS END=149633262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,914:0,62,255:26,0 chr2 149633263 . G . PASS END=149633279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:27,0 chr2 149633280 . A . PASS END=149633302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:25:0,62,878:0,62,255:26,0 chr2 149633303 . G . PASS END=149633303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 149633304 . G . PASS END=149633306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 149633307 . A . PASS END=149633307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:21,0 chr2 149633308 . T . PASS END=149633308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 149633309 . C . PASS END=149633312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 149679706 . C . PASS END=149679796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:36:0,105,1502:0,107,255:40,0 chr2 149686850 . A . PASS END=149686923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,160,255:40,1 chr2 149793798 . G . PASS END=149793898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:32:0,82,1149:0,82,255:40,0 chr2 149793899 . A . PASS END=149793899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1169:0,55,255:29,0 chr2 149793900 . A . PASS END=149793902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:31,0 chr2 149798124 . G . PASS END=149798172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:64:0,120,1800:0,178,255:40,0 chr2 149798449 . T . PASS END=149798504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,138,255:40,0 chr2 149799187 . G . PASS END=149799214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,815:0,69,255:26,0 chr2 149799215 . C . PASS END=149799217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 149799218 . A . PASS END=149799218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 149799219 . G . PASS END=149799226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 149799227 . T . PASS END=149799274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,901:0,65,255:26,0 chr2 149803413 . A . PASS END=149803537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,3:79:99:47:0,105,1701:0,105,255:40,2 chr2 149804457 . A . PASS END=149804474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,187,255:40,0 chr2 149806353 . G . PASS END=149806457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,114,1710:0,117,255:40,0 chr2 149806828 . A . PASS END=149806831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,931:0,78,255:26,0 chr2 149806832 . C . PASS END=149806972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,1055:0,84,255:40,0 chr2 149806973 . A . PASS END=149806976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:25,0 chr2 149818485 . A . PASS END=149818633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:62:0,120,1800:0,186,255:40,0 chr2 149829850 . G . PASS END=149829850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 149829851 . A . PASS END=149829858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1086:0,80,255:32,0 chr2 149829859 . T . PASS END=149829859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:30,0 chr2 149829860 . G . PASS END=149830000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1169:0,80,255:40,0 chr2 149830001 . T . PASS END=149830001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1061:0,77,255:30,0 chr2 149830002 . C . PASS END=149830013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:32,0 chr2 149830014 . C . PASS END=149830014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 149830015 . T . PASS END=149830015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:25,0 chr2 149830016 . G . PASS END=149830025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:29:0,63,945:0,80,255:25,0 chr2 149835436 . G . PASS END=149835504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,164,255:40,0 chr2 149837869 . C . PASS END=149837870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 149837871 . T . PASS END=149837871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 149837872 . T . PASS END=149837872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,831:0,23,255:24,0 chr2 149837873 . T . PASS END=149837874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr2 149837875 . G . PASS END=149837876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 149837877 . T . PASS END=149837877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 149837878 . T . PASS END=149837878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 149837879 . C . PASS END=149837880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr2 149837881 . A . PASS END=149837881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,976:0,45,255:27,0 chr2 149837882 . C . PASS END=149837882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 149837883 . A . PASS END=149837883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:28,0 chr2 149837884 . A . PASS END=149838033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:32:0,81,1089:0,86,255:40,0 chr2 149838034 . C . PASS END=149838047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:25,0 chr2 149838048 . G . PASS END=149838048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:20,0 chr2 149838049 . C . PASS END=149838059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,61,255:21,0 chr2 149838060 . G . PASS END=149838060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 149838061 . C . PASS END=149838061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 149838062 . T . PASS END=149838062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 149838063 . G . PASS END=149838066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 149838067 . C . PASS END=149838075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:18,0 chr2 149840134 . A . PASS END=149840136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 149840137 . A . PASS END=149840142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:31,0 chr2 149840143 . A . PASS END=149840143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 149840144 . C . PASS END=149840280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:35:0,105,1272:0,105,255:40,0 chr2 149840289 . G . PASS END=149840289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,123,255:33,0 chr2 149847524 . T . PASS END=149847669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:32:0,84,1252:0,86,255:40,0 chr2 149847670 . C . PASS END=149847701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,929:0,62,255:26,0 chr2 149847702 . T . PASS END=149847702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:23,0 chr2 149847703 . C . PASS END=149847712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 149850935 . C . PASS END=149851038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:30:0,80,1139:0,80,255:40,0 chr2 149851039 . G . PASS END=149851052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,922:0,62,255:26,0 chr2 149853778 . A . PASS END=149853854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,151,255:40,0 chr2 149854914 . A . PASS END=149855023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,120,1800:0,123,255:40,0 chr2 149856937 . T . PASS END=149857038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:61:0,120,1800:0,139,255:40,0 chr2 149857236 . A . PASS END=149857296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:65:0,120,1800:0,179,255:40,0 chr2 149861907 . T . PASS END=149861978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,115,1421:0,115,255:40,0 chr2 149864477 . A . PASS END=149864477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr2 149864478 . G . PASS END=149864493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr2 149864494 . C . PASS END=149864501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 149864502 . G . PASS END=149864502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 149864503 . A . PASS END=149864503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr2 149864504 . G . PASS END=149864553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1083:0,85,255:33,0 chr2 149864554 . G . PASS END=149864581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr2 149866649 . C . PASS END=149866650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 149866651 . G . PASS END=149866651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 149866652 . G . PASS END=149866661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:16,0 chr2 149866662 . A . PASS END=149866666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 149866667 . G . PASS END=149866667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 149866668 . A . PASS END=149866668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 149866669 . C . PASS END=149866669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 149866670 . C . PASS END=149866680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr2 149866681 . A . PASS END=149866682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,775:0,55,255:22,0 chr2 149866683 . T . PASS END=149866686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,984:0,65,255:26,0 chr2 149866687 . C . PASS END=149866687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,936:0,48,255:24,0 chr2 149866688 . A . PASS END=149866688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:25,0 chr2 149866689 . A . PASS END=149866691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 149866692 . T . PASS END=149866692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 149866693 . G . PASS END=149866720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:32,0 chr2 149866721 . C . PASS END=149866721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 149866722 . G . PASS END=149866726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 149866727 . A . PASS END=149866729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 149866730 . G . PASS END=149866765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1180:0,85,255:36,0 chr2 149866766 . G . PASS END=149866766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr2 149866767 . C . PASS END=149866814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:36,0 chr2 149866815 . A . PASS END=149866851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,798:0,63,255:26,0 chr2 149866852 . T . PASS END=149866865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:18,0 chr2 149868084 . C . PASS END=149868126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1185:0,83,255:38,0 chr2 149868127 . G . PASS END=149868127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1380:0,79,255:34,0 chr2 149868128 . G . PASS END=149868187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:32:0,87,1305:0,95,255:38,0 chr2 149868188 . T . PASS END=149868189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 149868190 . A . PASS END=149868190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 149987459 . A . PASS END=149987467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:55:0,120,1800:0,141,255:40,0 chr2 150017278 . G . PASS END=150017349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,131,255:40,0 chr2 150017963 . G . PASS END=150017977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,213,255:40,0 chr2 150017978 . C T, 50.00 PASS DP=76;MQ=249.58;MQRankSum=6.706;ReadPosRankSum=1.730;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,38,0:0.500,0.000:76:27,23,0:11,15,0:48:85,0,50,1302,1343,2644:255,0,255:33,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,20,15,23:19,19,24,14 chr2 150017979 . G . PASS END=150017991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,195,255:40,0 chr2 150043940 . A . PASS END=150044093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:53:0,120,1800:0,144,255:40,0 chr2 150045190 . A . PASS END=150045245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,139,255:40,0 chr2 150061039 . A . PASS END=150061043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,212,255:40,0 chr2 150061767 . A . PASS END=150061772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr2 150061773 . G . PASS END=150061773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 150061774 . A . PASS END=150061774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 150061775 . G . PASS END=150061775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 150061776 . T . PASS END=150061776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 150061777 . T . PASS END=150061779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,792:0,66,255:22,0 chr2 150061780 . G . PASS END=150061780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 150061781 . A . PASS END=150061800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 150061801 . A . PASS END=150061801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:23,0 chr2 150061802 . G . PASS END=150061811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr2 150061812 . C . PASS END=150061823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:31,0 chr2 150061824 . T . PASS END=150061824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,975:0,62,255:30,0 chr2 150061825 . C . PASS END=150061844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1133:0,93,255:36,0 chr2 150061845 . G . PASS END=150061845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:33,0 chr2 150061846 . A . PASS END=150061879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1197:0,91,255:37,0 chr2 150061880 . A . PASS END=150061880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1311:0,75,255:36,0 chr2 150061881 . G . PASS END=150061910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:34:0,81,1215:0,94,255:37,0 chr2 150061911 . T . PASS END=150061911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,967:0,68,255:27,0 chr2 150061912 . C . PASS END=150061913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 150061914 . C . PASS END=150061918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:29:0,72,1080:0,87,255:25,0 chr2 150062533 . A . PASS END=150062540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,188,255:40,0 chr2 150064828 . C . PASS END=150064926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,145,255:40,0 chr2 150069506 . A . PASS END=150069636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:37:0,108,1374:0,111,255:40,0 chr2 150071060 . G . PASS END=150071224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:83:33:0,83,1164:0,83,255:40,0 chr2 150294223 . A . PASS END=150294228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:24,0 chr2 150294229 . C . PASS END=150294229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 150294230 . C . PASS END=150294234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr2 150294235 . C . PASS END=150294235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 150294236 . C . PASS END=150294237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 150294238 . G . PASS END=150294324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1078:0,83,255:35,0 chr2 150294325 . T . PASS END=150294325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 150294326 . A . PASS END=150294332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 150294333 . T . PASS END=150294340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 150305563 . C . PASS END=150305661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:35:0,99,1485:0,105,255:40,0 chr2 150320678 . G . PASS END=150320691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:90:0,120,1800:0,227,255:40,0 chr2 150325159 . A . PASS END=150325160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr2 150325161 . A . PASS END=150325167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,956:0,81,255:30,0 chr2 150325168 . A . PASS END=150325168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 150325169 . C . PASS END=150325289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:38:0,84,1405:0,84,255:40,0 chr2 150327197 . G . PASS END=150327349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:32:0,84,1260:0,96,255:40,1 chr2 150327350 . G . PASS END=150327352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 150327353 . C . PASS END=150327353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 150327354 . T . PASS END=150327361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:22,0 chr2 150327362 . T . PASS END=150327364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,84,255:17,0 chr2 150426221 . A . PASS END=150426221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 150426247 . T . PASS END=150426247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 150426488 . C . PASS END=150426682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:91:35:0,91,1388:0,91,255:40,0 chr2 150426685 . G . PASS END=150426685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 150427586 . G . PASS END=150427586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 150427592 . T . PASS END=150427592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 150427599 . T . PASS END=150427685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,158,255:40,0 chr2 150432124 . T . PASS END=150432124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 150432225 . C . PASS END=150432339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:60:0,120,1800:0,123,255:40,0 chr2 150432340 . A . PASS END=150432355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,122,255:40,0 chr2 150432951 . C . PASS END=150432975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,107,1512:0,107,255:40,0 chr2 150432976 . C T, 200.49 PASS DP=51;MQ=244.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,20,0:0,31,0:150:238,153,0,1961,153,1961:255,153,0:0,0:2.0049e+02,1.5049e+02,0.0000e+00,4.5000e+02,1.8526e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,22:0,0,20,31 chr2 150432977 . T . PASS END=150433013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,120,1800:0,149,255:40,0 chr2 150433014 . T . PASS END=150433056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,117,1755:0,147,255:40,0 chr2 150435945 . C . PASS END=150435945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1192:0,50,255:32,0 chr2 150435946 . T . PASS END=150435950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:33,0 chr2 150435951 . T . PASS END=150435951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 150435952 . T . PASS END=150435956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:63:34:0,63,1188:0,63,255:34,0 chr2 150435957 . C . PASS END=150436140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:82:32:0,82,1260:0,82,255:40,0 chr2 150436141 . T . PASS END=150436142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,80,255:25,0 chr2 150436143 . A . PASS END=150436143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:22,0 chr2 150436144 . G . PASS END=150436144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr2 150436145 . G . PASS END=150436162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:19:0,45,675:0,57,255:18,0 chr2 150438640 . C . PASS END=150438640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:29,0 chr2 150438641 . A . PASS END=150438646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:32:0,83,1200:0,83,255:35,0 chr2 150438647 . C . PASS END=150438647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1279:0,64,255:33,0 chr2 150438648 . T . PASS END=150438752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1357:0,95,255:40,0 chr2 150438753 . A . PASS END=150438753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1421:0,79,255:34,0 chr2 150438754 . T . PASS END=150438767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1395:0,90,255:37,0 chr2 150438768 . G . PASS END=150438768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:32,0 chr2 150438769 . G . PASS END=150438771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:36:0,80,1327:0,80,255:32,0 chr2 150438772 . C . PASS END=150438780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1035:0,86,255:26,0 chr2 150438781 . A . PASS END=150438781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:23,0 chr2 150438782 . G . PASS END=150438782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,96,255:21,0 chr2 150438783 . C . PASS END=150438786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 150438788 . A . PASS END=150438788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:28:0,63,945:0,67,255:21,0 chr2 150443603 . A . PASS END=150443611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:87:69:0,87,1800:0,87,255:40,0 chr2 150443627 . T . PASS END=150443627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:68:0,120,1800:0,171,255:40,0 chr2 150443666 . G . PASS END=150443666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 150444185 . C . PASS END=150444185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 150444187 . C . PASS END=150444187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 150444261 . C . PASS END=150444261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 151326501 . T . PASS END=151326752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:35:0,87,1352:0,87,255:40,0 chr2 151328141 . C . PASS END=151328143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr2 151328144 . G . PASS END=151328234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:28:0,81,1141:0,84,255:40,0 chr2 151328235 . A . PASS END=151328257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:51:0,84,1260:0,153,255:40,0 chr2 151328258 . C . PASS END=151328260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:63:51:0,63,945:0,153,255:26,0 chr2 151328261 . G . PASS END=151328264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:48:51:0,48,720:0,137,255:18,0 chr2 151328265 . T . PASS END=151328268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:30:50:0,30,450:0,150,255:12,0 chr2 151328269 . C . PASS END=151328271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:27:47:0,27,405:0,141,255:9,0 chr2 151328272 . T . PASS END=151328272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:18:47:0,18,270:0,141,255:6,0 chr2 151328273 . C . PASS END=151328275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:6:46:0,6,90:0,138,255:3,0 chr2 151331389 . C . PASS END=151331491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:35:0,90,1327:0,105,255:40,0 chr2 151331492 . G . PASS END=151331498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:38:0,78,1170:0,101,255:26,0 chr2 151343208 . C . PASS END=151343295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,144,255:40,0 chr2 151343782 . C . PASS END=151343785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 151343786 . G . PASS END=151343786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 151343787 . G . PASS END=151343787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 151343788 . G . PASS END=151343880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:27:0,81,1047:0,81,255:40,0 chr2 151343881 . A . PASS END=151343915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:82:40:0,82,1443:0,82,255:40,0 chr2 151343916 . C . LowGQ END=151343916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,7:41:0:41:0,0,1069:29,0,255:26,0 chr2 151343917 . T . PASS END=151343917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:41:0,93,1395:0,123,255:31,0 chr2 151343918 . C . LowGQ END=151343918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,11:41:0:41:0,0,885:110,0,255:20,0 chr2 151343919 . T . PASS END=151343920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,120,255:31,0 chr2 151343921 . C . PASS END=151343921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:23:40:0,23,1133:0,23,255:25,0 chr2 151343922 . T . PASS END=151343922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1305:0,120,255:29,0 chr2 151343923 . C . PASS END=151343923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1291:0,73,255:26,0 chr2 151343924 . T . PASS END=151343925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 151343926 . C . PASS END=151343931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:66:32:0,66,990:0,80,255:24,0 chr2 152107420 . T . PASS END=152108086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:38:0,80,1404:0,80,255:40,1 chr2 152108087 . A . PASS END=152108087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:7:54:0,7,1723:0,7,255:40,6 chr2 152108088 . T . PASS END=152108088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:18:55:0,18,1754:0,18,255:40,2 chr2 152108089 . T . PASS END=152108089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1763:0,71,255:40,0 chr2 152108090 . T . PASS END=152108178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:32:0,90,1350:0,93,255:40,0 chr2 152109269 . C . PASS END=152109369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,100,1557:0,100,255:40,0 chr2 152112047 . C . PASS END=152112064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,864:0,61,255:26,0 chr2 152112065 . T . PASS END=152112250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:80:32:0,80,1141:0,80,255:40,0 chr2 152112251 . C . PASS END=152112251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:30,0 chr2 152112252 . T . PASS END=152112257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,92,255:31,0 chr2 152117582 . T . PASS END=152117593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,127,255:40,0 chr2 152117820 . C . PASS END=152117821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 152117822 . A . PASS END=152117830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:25,0 chr2 152117831 . A . PASS END=152117831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:24,0 chr2 152117832 . C . PASS END=152117835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,889:0,78,255:26,0 chr2 152117836 . T . PASS END=152117836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,906:0,47,255:25,0 chr2 152117837 . G . PASS END=152117847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:26,0 chr2 152117848 . G . PASS END=152117848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 152117849 . G . PASS END=152117850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 152117851 . G . PASS END=152117867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr2 152117868 . A . PASS END=152117868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 152117869 . A . PASS END=152117876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:31,0 chr2 152117877 . C . PASS END=152117877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:29,0 chr2 152117878 . A . PASS END=152117897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1164:0,80,255:31,0 chr2 152117898 . G . PASS END=152117898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 152117899 . A . PASS END=152117904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1135:0,93,255:31,0 chr2 152117905 . G . PASS END=152117906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 152117907 . C . PASS END=152117909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 152117910 . C . PASS END=152117910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:28,0 chr2 152117911 . G . PASS END=152117916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 152117917 . G . PASS END=152117918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 152117919 . C . PASS END=152117919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 152117920 . G . PASS END=152117935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 152117936 . T . PASS END=152117953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,955:0,67,255:26,0 chr2 152117954 . T . PASS END=152117955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 152117956 . C . PASS END=152117956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 152117957 . T C, 49.33 PASS DP=29;MQ=248.53;MQRankSum=4.539;ReadPosRankSum=0.417;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,13,0:0.448,0.000:29:13,7,0:3,6,0:48:84,0,50,465,564,1029:255,0,255:15,0:4.9327e+01,7.2481e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,9,5,8:8,8,5,8 chr2 152117958 . G . PASS END=152117964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 152117965 . T . PASS END=152117966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 152117967 . G . PASS END=152117978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,71,255:26,0 chr2 152117979 . A . PASS END=152117979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:22,0 chr2 152117980 . C . PASS END=152117981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:24:0,69,1035:0,72,255:23,0 chr2 152117982 . G . PASS END=152117982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 152117983 . C . PASS END=152117984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 152117985 . C . PASS END=152117985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 152117986 . C . PASS END=152117990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 152117991 . T . PASS END=152117991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 152117992 . A . PASS END=152117994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 152117995 . T . PASS END=152117995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 152117996 . G . PASS END=152117997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 152117998 . A . PASS END=152117998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:20,0 chr2 152117999 . T . PASS END=152118005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 152118006 . A . PASS END=152118023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,43,255:19,0 chr2 152118239 . C . PASS END=152118240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1156:0,93,255:31,0 chr2 152118241 . T . PASS END=152118241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:28,0 chr2 152127207 . C . PASS END=152127207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 152127208 . T . PASS END=152127208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 152127209 . A . PASS END=152127386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:81:29:0,81,1080:0,86,255:40,0 chr2 152127387 . T . PASS END=152127389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1007:0,63,255:26,0 chr2 152128140 . C . PASS END=152128246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:75:0,120,1800:0,202,255:40,0 chr2 152131998 . C . PASS END=152132017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,929:0,82,255:35,0 chr2 152132018 . A . PASS END=152132018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 152132019 . T . PASS END=152132184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:36:0,96,1329:0,96,255:40,1 chr2 152132272 . C . PASS END=152132349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:37:0,84,1260:0,94,255:40,0 chr2 152132350 . T . PASS END=152132378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,792:0,61,255:26,0 chr2 152135342 . C . PASS END=152135491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1194:0,84,255:40,0 chr2 152135492 . T . PASS END=152135504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,65,255:26,0 chr2 152138462 . C . PASS END=152138484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:41:0,90,1388:0,90,255:40,0 chr2 152138485 . G . PASS END=152138521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,138,255:40,0 chr2 152138522 . T C, 50.00 PASS DP=55;MQ=249.12;MQRankSum=5.446;ReadPosRankSum=5.598;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,28,0:0.509,0.000:55:12,15,0:15,13,0:48:85,0,50,1000,902,1902:255,0,255:24,0:5.0000e+01,6.5492e-05,5.2949e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,14,14:16,11,19,9 chr2 152138523 . T . PASS END=152138557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,109,1722:0,109,255:40,0 chr2 152139382 . C . PASS END=152139415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,191,255:40,0 chr2 152139416 . G A, 47.25 PASS DP=78;MQ=250.00;MQRankSum=7.471;ReadPosRankSum=5.612;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,32,0:0.410,0.000:78:24,14,0:22,18,0:46:82,0,50,1128,1592,2721:255,0,255:40,0:4.7254e+01,1.0355e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,22,13,19:22,24,17,15 chr2 152139417 . A . PASS END=152139462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,178,255:40,0 chr2 152214181 . A . PASS END=152214274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:77:0,120,1800:0,193,255:40,0 chr2 152220457 . A . PASS END=152220592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:87:30:0,87,1127:0,90,255:40,0 chr2 152220593 . T . PASS END=152220593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 152220594 . G . PASS END=152220594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 152222570 . G . PASS END=152222731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:29:0,84,1078:0,87,255:40,0 chr2 152226534 . C . PASS END=152226536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:34,0 chr2 152226537 . A . PASS END=152226537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1126:0,61,255:29,0 chr2 152226538 . G . PASS END=152226569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:38:0,87,1335:0,87,255:40,0 chr2 152226570 . A G, 49.93 PASS DP=48;MQ=250.00;MQRankSum=5.923;ReadPosRankSum=5.056;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,23,0:0.479,0.000:48:11,10,0:14,13,0:47:85,0,47,185,185,185:255,0,255:25,0:4.9933e+01,8.7495e-05,5.0000e+01,1.8470e+02,2.1947e+02,1.8771e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,10,17,6:9,16,8,15 chr2 152226571 . A . PASS END=152226607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,120,255:40,0 chr2 152226608 . G . PASS END=152226762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:49:0,81,1215:0,103,255:40,0 chr2 152230063 . A . PASS END=152230103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:69:0,120,1800:0,199,255:40,0 chr2 152235878 . G . PASS END=152235999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:32:0,83,1186:0,83,255:40,0 chr2 152236000 . T . PASS END=152236025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:52:0,87,1485:0,87,255:40,1 chr2 152236026 . T . PASS END=152236026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:73:52:0,73,1604:0,73,255:31,0 chr2 152236027 . G . PASS END=152236033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:52:0,81,1215:0,106,255:34,0 chr2 152236034 . T . PASS END=152236039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:60:51:0,60,900:0,73,255:25,0 chr2 152236040 . A . PASS END=152236044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:54:46:0,54,810:0,88,255:19,0 chr2 152236045 . TAA TA,T, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.189;ReadPosRankSum=0.310;FractionInformativeReads=0.927;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,15,7,0:0.395,0.184,0.000:38:7,7,3,0:9,8,4,0:40:58,0,49,41,82,91,75,84,162,160:255,0,255:16,35:5.0000e+01,4.3594e-04,5.1753e+01,4.0773e+01,8.9911e+01,9.3773e+01,1.0225e+02,1.1882e+02,1.9704e+02,1.8928e+02:0.00,8.00,11.00,8.00,16.00,11.00,34.77,42.77,42.77,37.77:6,10,7,15:11,5,13,9 chr2 152236046 . A . LowGQ END=152236047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:23,34:57:0:48:0,0,0:255,0,255:33,33 chr2 152266470 . A . PASS END=152266488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 152266489 . T . PASS END=152266489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 152266490 . G . PASS END=152266502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 152266503 . T . PASS END=152266504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 152266505 . C . PASS END=152266519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:11,0 chr2 152266520 . G . PASS END=152266523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 152266524 . A . PASS END=152266524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:8,0 chr2 152266525 . G . PASS END=152266525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 152266526 . A . PASS END=152266526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,303:0,16,255:8,0 chr2 152266527 . A . PASS END=152266529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 152266530 . C . PASS END=152266539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 152266540 . C . PASS END=152266547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 152266938 . A . PASS END=152266943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:19,0 chr2 152266944 . G . PASS END=152266964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,762:0,60,255:23,0 chr2 152266965 . G . PASS END=152266965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:22,0 chr2 152266966 . C . PASS END=152266986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:67:23:0,67,853:0,67,255:26,0 chr2 152266987 . A . PASS END=152266987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,937:0,29,255:24,0 chr2 152266988 . A . PASS END=152266993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr2 152266994 . T . PASS END=152266995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 152266996 . C . PASS END=152267011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,915:0,64,255:25,0 chr2 152267012 . G . PASS END=152267013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 152267014 . A . PASS END=152267021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 152267022 . G . PASS END=152267022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 152267023 . C . PASS END=152267032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 152267033 . T . PASS END=152267033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 152267034 . C . PASS END=152267038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 152267039 . C . PASS END=152267039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 152267040 . A . PASS END=152267041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 152267774 . T . PASS END=152267852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:60:0,120,1800:0,133,255:40,0 chr2 152271337 . A . PASS END=152271433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:35:0,99,1418:0,101,255:40,0 chr2 152273075 . A . PASS END=152273202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,124,255:40,0 chr2 152273321 . G . PASS END=152273415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,157,255:40,0 chr2 152276704 . G . PASS END=152276877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:87:31:0,87,1227:0,88,255:40,0 chr2 152276878 . G . PASS END=152276878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 152276879 . C . PASS END=152276880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 152276881 . G . PASS END=152276889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,945:0,89,255:25,0 chr2 152276890 . T . PASS END=152276893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:26:0,48,855:0,48,255:20,0 chr2 152279464 . A . PASS END=152279556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,120,1800:0,127,255:40,0 chr2 152285298 . A . PASS END=152285436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,108,1620:0,116,255:40,0 chr2 152289591 . A . PASS END=152289742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,108,1620:0,114,255:40,0 chr2 152291977 . G . PASS END=152292093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,85,255:40,0 chr2 152292094 . G . PASS END=152292094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:25,0 chr2 152293341 . G . PASS END=152293348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,762:0,66,255:22,0 chr2 152293349 . T . PASS END=152293357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1272:0,92,255:34,0 chr2 152293358 . G . PASS END=152293358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1263:0,53,255:31,0 chr2 152293359 . G . PASS END=152293366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:36:0,99,1485:0,108,255:40,0 chr2 152293367 . G . PASS END=152293517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,100,1530:0,100,255:40,0 chr2 152293755 . A . PASS END=152293865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:43:0,86,1385:0,86,255:40,2 chr2 152295198 . A . PASS END=152295260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,182,255:40,0 chr2 152296541 . G . PASS END=152296641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:76:0,120,1800:0,155,255:40,0 chr2 152298419 . G . PASS END=152298505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:45:0,114,1710:0,118,255:40,0 chr2 152299773 . G . PASS END=152299843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,130,255:40,0 chr2 152300043 . G . PASS END=152300203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:36:0,87,1305:0,92,255:40,1 chr2 152300204 . T . PASS END=152300214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,63,255:25,0 chr2 152300215 . A . PASS END=152300215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 152300216 . T . PASS END=152300220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:23,0 chr2 152300221 . C . PASS END=152300223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,810:0,42,255:19,0 chr2 152301852 . A . PASS END=152301959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:74:0,120,1800:0,195,255:40,0 chr2 152302940 . G . PASS END=152302956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:18,0 chr2 152302957 . G . PASS END=152302963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,664:0,63,255:21,0 chr2 152302964 . A . PASS END=152302964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 152302965 . C . PASS END=152302969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 152302970 . T . PASS END=152302972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr2 152302973 . G . PASS END=152303089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:28:0,83,997:0,83,255:40,0 chr2 152308120 . A . PASS END=152308219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,201,255:40,0 chr2 152311409 . C . PASS END=152311532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:34:0,99,1393:0,102,255:40,0 chr2 152311533 . T . PASS END=152311569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,143,255:40,0 chr2 152311570 . G A, 49.25 PASS DP=62;MQ=250.00;MQRankSum=6.726;ReadPosRankSum=5.354;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,28,0:0.452,0.000:62:16,14,0:18,14,0:48:84,0,50,993,1171,2165:255,0,255:32,0:4.9247e+01,7.3517e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,18,16,12:20,14,16,12 chr2 152311571 . G . PASS END=152311607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,156,255:40,0 chr2 152311608 . T . PASS END=152311673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,109,1651:0,109,255:40,0 chr2 152313092 . G . PASS END=152313134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,242,255:40,0 chr2 152314275 . T . PASS END=152314347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:85:45:0,85,1435:0,85,255:40,0 chr2 152314348 . T . PASS END=152314384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:70:0,120,1800:0,142,255:40,1 chr2 152314385 . G A, 49.63 PASS DP=73;MQ=250.00;MQRankSum=7.326;ReadPosRankSum=3.301;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,34,0:0.466,0.000:73:13,19,0:26,15,0:48:84,0,50,1216,1357,2573:255,0,255:35,0:4.9630e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,20,11,23:23,16,18,16 chr2 152314386 . C . PASS END=152314422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:68:0,120,1800:0,177,255:40,0 chr2 152314423 . T . PASS END=152314477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:38:0,84,1260:0,100,255:40,0 chr2 152315325 . A . PASS END=152315424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:59:0,120,1800:0,151,255:40,0 chr2 152316514 . A . PASS END=152316633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:91:39:0,91,1405:0,91,255:40,0 chr2 152317652 . C . PASS END=152317803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,120,1800:0,123,255:40,0 chr2 152318756 . G . PASS END=152318763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:55:0,120,1800:0,165,255:40,0 chr2 152318764 . T . PASS END=152318836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,182,255:40,0 chr2 152318926 . G . PASS END=152318980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:87:0,120,1800:0,252,255:40,0 chr2 152319398 . G . PASS END=152320080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:31:0,84,1260:0,89,255:40,0 chr2 152320081 . A . PASS END=152320117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,102,1773:0,102,255:40,0 chr2 152320118 . G A, 50.00 PASS DP=57;MQ=250.00;MQRankSum=6.103;ReadPosRankSum=2.852;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,38,0:0.667,0.000:57:13,18,0:6,20,0:42:85,0,40,1351,651,2002:255,0,255:18,0:5.0000e+01,2.6767e-04,4.2869e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,22,16:11,8,20,18 chr2 152320119 . T . PASS END=152320155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,156,255:40,0 chr2 152320156 . G . PASS END=152320345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:80:32:0,80,1117:0,80,255:40,0 chr2 152320346 . C . PASS END=152320347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:28,0 chr2 152320348 . T . PASS END=152320350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 152320351 . A . PASS END=152320351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1153:0,69,255:29,0 chr2 152320352 . A . PASS END=152320401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:33:0,89,1213:0,89,255:40,0 chr2 152320402 . G . PASS END=152320402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1194:0,70,255:40,0 chr2 152320403 . C . PASS END=152320405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:42:0,93,1304:0,93,255:40,0 chr2 152320406 . A . PASS END=152320406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:39,0 chr2 152320407 . T . PASS END=152320411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1443:0,96,255:40,0 chr2 152320412 . G . PASS END=152320412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,7:46:21:46:0,21,1046:0,21,255:37,0 chr2 152320413 . A . PASS END=152320436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:46:0,85,1481:0,85,255:40,0 chr2 152320437 . T . PASS END=152320437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1401:0,66,255:40,0 chr2 152320438 . G . PASS END=152320452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:44:0,93,1393:0,93,255:40,0 chr2 152320453 . T . PASS END=152320453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:47:50:0,47,1424:0,47,255:40,0 chr2 152320454 . C . PASS END=152322057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:39:0,81,1329:0,81,255:40,2 chr2 152322058 . A . PASS END=152322094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:58:0,120,1800:0,161,255:40,0 chr2 152322095 . A T, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.631;ReadPosRankSum=5.090;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,32,0:0.533,0.000:60:14,21,0:14,11,0:48:85,0,50,1087,921,2015:255,0,255:28,0:5.0000e+01,6.7304e-05,5.2604e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,9,17,15:11,17,18,14 chr2 152322096 . A . PASS END=152322132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,159,255:40,0 chr2 152322133 . T . PASS END=152322548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:33:0,81,1215:0,89,255:40,0 chr2 152322549 . C . PASS END=152322559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr2 152322560 . T . PASS END=152322560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 152322561 . C . PASS END=152322561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 152322562 . T . PASS END=152322568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 152322569 . A . PASS END=152322569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,984:0,57,255:27,0 chr2 152322570 . C . PASS END=152322577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1125:0,90,255:30,0 chr2 152322578 . T . PASS END=152322581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1070:0,74,255:26,0 chr2 152322582 . A . PASS END=152322582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:25,0 chr2 152322583 . G . PASS END=152322606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,877:0,68,255:25,0 chr2 152322607 . A . PASS END=152322607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 152322608 . G . PASS END=152322614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 152322615 . T . PASS END=152322615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:24,0 chr2 152322616 . C . PASS END=152322617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 152322618 . C . PASS END=152322618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 152322619 . A . PASS END=152322632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 152322633 . A . PASS END=152322633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 152322634 . G . PASS END=152322634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 152324514 . G . PASS END=152324518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,939:0,67,255:26,0 chr2 152324519 . C . PASS END=152324519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 152324520 . C . PASS END=152324520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 152324521 . G . PASS END=152324660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:33:0,83,1172:0,83,255:40,0 chr2 152324988 . C . PASS END=152325065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:58:0,120,1800:0,144,255:40,0 chr2 152325155 . A . PASS END=152325247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,111,1483:0,112,255:40,1 chr2 152325248 . C . PASS END=152325248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1443:0,79,255:36,0 chr2 152325249 . C . PASS END=152325265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:37:0,84,1260:0,94,255:37,0 chr2 152325266 . A . PASS END=152325270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 152326225 . G . PASS END=152326237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1022:0,80,255:35,0 chr2 152326238 . G . PASS END=152326238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 152326239 . G . PASS END=152326267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:36:0,80,1433:0,80,255:40,0 chr2 152326268 . A . PASS END=152326268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1361:0,79,255:40,0 chr2 152326269 . C . PASS END=152326378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,99,1413:0,104,255:40,0 chr2 152330478 . G . PASS END=152330586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:50:0,120,1800:0,134,255:40,0 chr2 152331371 . A . PASS END=152331417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:41:0,106,1300:0,106,255:40,0 chr2 152331418 . C G, 49.10 PASS DP=51;MQ=249.45;MQRankSum=5.556;ReadPosRankSum=-0.047;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,23,0:0.451,0.000:51:13,15,0:15,8,0:48:84,0,50,765,964,1729:255,0,255:28,0:4.9095e+01,7.5329e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,11,12,11:10,18,14,9 chr2 152331419 . T . PASS END=152331455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:52:0,120,1800:0,140,255:40,0 chr2 152331456 . A . PASS END=152331585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,102,1506:0,102,255:40,0 chr2 152341958 . G . PASS END=152341958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 152342062 . A . PASS END=152342062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 152342073 . T . PASS END=152342073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 152342179 . C . PASS END=152342179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 152342217 . G . PASS END=152342217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 152342238 . G . PASS END=152342238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 152342274 . C . PASS END=152342443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:98:43:0,98,1491:0,98,255:40,0 chr2 152342444 . T . PASS END=152342448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,113,1505:0,113,255:39,0 chr2 152346483 . A . PASS END=152346483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 152346485 . T . PASS END=152346591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,101,1800:0,101,255:40,0 chr2 152346883 . T . PASS END=152346883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 152346885 . C . PASS END=152346886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:31,0 chr2 152346887 . T . PASS END=152346887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr2 152346888 . G . PASS END=152346897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:92:32:0,92,1158:0,92,255:34,0 chr2 152346898 . C . PASS END=152346898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 152346899 . A . PASS END=152347023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1260:0,89,255:40,0 chr2 152347024 . G . PASS END=152347033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,89,255:26,0 chr2 152348194 . C . PASS END=152348194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,117,1822:0,117,255:40,0 chr2 152348197 . C . PASS END=152348289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:48:0,120,1800:0,128,255:40,0 chr2 152348291 . T . PASS END=152348291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152348611 . C . PASS END=152348795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:39:0,107,1482:0,107,255:40,0 chr2 152348803 . G . PASS END=152348803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 152348901 . C . PASS END=152348988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:37:0,80,1031:0,80,255:40,0 chr2 152348989 . A . PASS END=152348992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1288:0,94,255:37,0 chr2 152348993 . T . PASS END=152348993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1055:0,77,255:35,0 chr2 152348994 . A . PASS END=152349008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:35:0,88,1219:0,88,255:37,0 chr2 152349867 . C . PASS END=152349961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,122,255:40,0 chr2 152350289 . C . PASS END=152350383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,111,1507:0,113,255:40,0 chr2 152350675 . C . PASS END=152350767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,99,1485:0,115,255:40,0 chr2 152352790 . C . PASS END=152352798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,974:0,84,255:30,0 chr2 152352799 . A . PASS END=152352799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1001:0,63,255:30,0 chr2 152352800 . T . PASS END=152352805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:32:0,85,1156:0,85,255:34,0 chr2 152352806 . T . PASS END=152352811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1241:0,86,255:35,0 chr2 152352812 . T . PASS END=152352812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:34,0 chr2 152352813 . G . PASS END=152352842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:36:0,91,1128:0,91,255:40,0 chr2 152352843 . C G, 50.00 PASS DP=40;MQ=177.35;MQRankSum=-3.365;ReadPosRankSum=1.259;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:11,11,0:6,12,0:47:85,0,48,814,571,1386:255,0,255:17,0:5.0000e+01,7.8953e-05,5.0888e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,11,11,12:8,9,11,12 chr2 152352844 . T . PASS END=152352880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1175:0,84,255:38,0 chr2 152352881 . A . PASS END=152352883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1305:0,108,255:29,0 chr2 152353454 . C . PASS END=152353461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:26,0 chr2 152353462 . A . PASS END=152353476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:28,0 chr2 152353477 . T . PASS END=152353477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 152353478 . G . PASS END=152353478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 152353479 . T . PASS END=152353479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,971:0,76,255:29,0 chr2 152353480 . T . PASS END=152353513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:31:0,82,1127:0,82,255:37,0 chr2 152353514 . G . PASS END=152353514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:32,0 chr2 152353515 . G . PASS END=152353535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,92,255:31,0 chr2 152353536 . T . PASS END=152353536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:29,0 chr2 152353537 . T . PASS END=152353537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 152353538 . T . PASS END=152353547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr2 152354139 . C . PASS END=152354145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:30,0 chr2 152354146 . A . PASS END=152354146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:29,0 chr2 152354147 . A . PASS END=152354147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 152354148 . T . PASS END=152354148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1056:0,62,255:30,0 chr2 152354149 . A . PASS END=152354152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1030:0,80,255:32,0 chr2 152354153 . T . PASS END=152354154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1070:0,63,255:31,0 chr2 152354155 . T . PASS END=152354155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:32,0 chr2 152354156 . T . PASS END=152354157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 152354158 . A . PASS END=152354167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:32:0,91,1172:0,91,255:35,0 chr2 152354168 . A . PASS END=152354168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr2 152354169 . C . PASS END=152354232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1261:0,100,255:40,0 chr2 152354239 . G . PASS END=152354239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 152354738 . T . PASS END=152354866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:74:0,120,1800:0,191,255:40,0 chr2 152355017 . G . PASS END=152355017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,247,255:40,0 chr2 152355811 . C . PASS END=152355811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 152355812 . C . PASS END=152355812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:17,0 chr2 152355813 . G . PASS END=152355822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,726:0,63,255:24,0 chr2 152355823 . T . PASS END=152355823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr2 152355824 . T . PASS END=152355826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 152355827 . T . PASS END=152355827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 152355828 . T . PASS END=152355834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr2 152355835 . G . PASS END=152355836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr2 152355837 . T . PASS END=152355837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,812:0,64,255:26,0 chr2 152355838 . T . PASS END=152355905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:27:0,81,957:0,81,255:39,0 chr2 152357905 . C . PASS END=152357999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:41:0,93,1395:0,96,255:40,0 chr2 152359303 . A . PASS END=152359303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 152359307 . C . PASS END=152359322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,117,1776:0,117,255:40,0 chr2 152359323 . T . PASS END=152359399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1798:0,120,255:40,0 chr2 152359862 . C . PASS END=152359956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,120,1800:0,135,255:40,0 chr2 152361987 . A . PASS END=152361987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 152361990 . A . PASS END=152361990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 152361992 . C . PASS END=152362084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:40:0,114,1710:0,115,255:40,0 chr2 152362089 . A . PASS END=152362089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 152362668 . C . PASS END=152362668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 152362680 . C . PASS END=152362772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,166,255:40,0 chr2 152362775 . G . PASS END=152362775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 152363423 . C . PASS END=152363527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:53:0,119,1800:0,119,255:40,0 chr2 152364518 . C . PASS END=152364538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,118,1600:0,118,255:40,0 chr2 152364539 . T . PASS END=152364539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1521:0,69,255:40,0 chr2 152364540 . C . PASS END=152364623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,131,255:40,0 chr2 152369242 . C . PASS END=152369242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 152369247 . C . PASS END=152369351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:59:0,120,1800:0,166,255:40,0 chr2 152370092 . A . PASS END=152370092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 152370094 . C . PASS END=152370207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:41:0,83,1477:0,83,255:40,0 chr2 152370828 . C . PASS END=152370828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152370830 . A . PASS END=152370830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 152370832 . C . PASS END=152370942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,114,1710:0,118,255:40,0 chr2 152370945 . A . PASS END=152370945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 152371332 . C . PASS END=152371443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,100,1336:0,100,255:40,0 chr2 152372970 . T . PASS END=152372971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,171,255:40,0 chr2 152372973 . C . PASS END=152373077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,174,255:40,0 chr2 152373084 . A . PASS END=152373084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 152374823 . T . PASS END=152374823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 152374830 . A . PASS END=152374837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,199,255:40,0 chr2 152374838 . C . PASS END=152374937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:67:0,120,1800:0,184,255:40,1 chr2 152375479 . A . PASS END=152375584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,114,1710:0,137,255:40,0 chr2 152375586 . G . PASS END=152375586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,111,1665:0,147,255:37,0 chr2 152376170 . A . PASS END=152376170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 152376172 . C . PASS END=152376282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,145,255:40,0 chr2 152380823 . A . PASS END=152380875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1210:0,86,255:37,0 chr2 152380876 . G . PASS END=152380876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr2 152380877 . A . PASS END=152380929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:39:0,91,1412:0,91,255:40,0 chr2 152381023 . C . PASS END=152381023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152381029 . C . PASS END=152381099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:83:38:0,83,1380:0,83,255:40,0 chr2 152381100 . G . PASS END=152381100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:33,0 chr2 152381101 . G . PASS END=152381103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:35,0 chr2 152381104 . C . PASS END=152381105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:64:37:0,64,1263:0,64,255:34,0 chr2 152381106 . C . PASS END=152381106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1194:0,39,255:32,0 chr2 152381107 . T . PASS END=152381110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:36:0,80,1242:0,80,255:35,0 chr2 152381111 . G . PASS END=152381111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1147:0,55,255:32,0 chr2 152381112 . C . PASS END=152381113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:32,0 chr2 152381114 . T . PASS END=152381114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1102:0,55,255:28,0 chr2 152381115 . C . PASS END=152381115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 152381116 . T . PASS END=152381116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:29,0 chr2 152381117 . T . PASS END=152381118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1257:0,89,255:31,0 chr2 152381119 . T . PASS END=152381119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 152381120 . C . PASS END=152381120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:27,0 chr2 152381121 . T . PASS END=152381121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1192:0,58,255:26,0 chr2 152381122 . G . PASS END=152381122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:22:36:0,22,1127:0,22,255:26,0 chr2 152381123 . T . PASS END=152381123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1113:0,82,255:27,0 chr2 152381124 . A . PASS END=152381124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1047:0,41,255:26,0 chr2 152381125 . A . PASS END=152381125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:26,0 chr2 152381126 . G . PASS END=152381126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,986:0,24,255:25,0 chr2 152381127 . C . PASS END=152381127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1092:0,49,255:24,0 chr2 152381128 . G . PASS END=152381128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,978:0,10,255:23,0 chr2 152381129 . A . PASS END=152381131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,990:0,65,255:25,0 chr2 152381135 . A . PASS END=152381135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1063:0,49,255:22,0 chr2 152381670 . A . PASS END=152381670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 152381674 . T . PASS END=152381674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 152381677 . A . PASS END=152381788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,111,1665:0,124,255:40,0 chr2 152382472 . A . PASS END=152382472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 152382473 . T . PASS END=152382473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1413:0,79,255:38,0 chr2 152382474 . C . PASS END=152382491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,106,1413:0,106,255:40,0 chr2 152382492 . C . PASS END=152382582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,114,1423:0,116,255:40,0 chr2 152382672 . C . PASS END=152382760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,100,1245:0,100,255:40,0 chr2 152382761 . T . PASS END=152382761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1323:0,78,255:35,0 chr2 152382762 . C . PASS END=152382777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1311:0,95,255:37,0 chr2 152383432 . A . PASS END=152383535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1109:0,80,255:40,0 chr2 152383536 . A . PASS END=152383536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,951:0,65,255:29,0 chr2 152383542 . A . PASS END=152383542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 152383982 . T . PASS END=152383982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1511:0,120,255:40,0 chr2 152383995 . A . PASS END=152384099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:34:0,87,1305:0,95,255:40,0 chr2 152384101 . T . PASS END=152384101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 152385724 . A . PASS END=152385828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:39:0,103,1575:0,103,255:40,0 chr2 152387507 . C . PASS END=152387515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,120,1800:0,122,255:40,0 chr2 152387516 . C . PASS END=152387516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1629:0,64,255:40,0 chr2 152387517 . T . PASS END=152387552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1768:0,120,255:40,0 chr2 152387553 . T C, 49.65 PASS DP=57;MQ=250.00;MQRankSum=6.399;ReadPosRankSum=2.374;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,26,0:0.464,0.000:56:16,13,0:14,13,0:47:84,0,47,184,184,184:255,0,255:28,0:4.9649e+01,9.0602e-05,5.0000e+01,1.8442e+02,2.1919e+02,1.8743e+02:0.00,34.77,37.78,34.77,69.54,37.78:18,12,13,13:14,16,10,16 chr2 152387554 . G . PASS END=152387590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,121,255:40,0 chr2 152387591 . T . PASS END=152387615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,99,1485:0,107,255:40,0 chr2 152388306 . A . PASS END=152388370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:59:0,120,1800:0,153,255:40,0 chr2 152388371 . A . PASS END=152388410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,102,1530:0,167,255:40,0 chr2 152389953 . T . PASS END=152389953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr2 152389956 . C . PASS END=152390036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:46:0,105,1590:0,105,255:40,0 chr2 152390037 . C . PASS END=152390037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,7:71:75:71:0,75,2148:0,75,255:40,0 chr2 152390038 . T . PASS END=152390046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,180,255:40,0 chr2 152390047 . G . PASS END=152390047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,7:71:68:71:0,68,2103:0,68,255:40,0 chr2 152390048 . A . PASS END=152390053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:90:71:0,90,1800:0,90,255:40,0 chr2 152390054 . A . PASS END=152390054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,10:71:10:71:0,10,1878:0,10,255:40,0 chr2 152390055 . T . PASS END=152390060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:67:0,120,1800:0,134,255:40,0 chr2 152390067 . A . PASS END=152390067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,181,255:40,0 chr2 152390729 . C . PASS END=152390833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,120,1800:0,126,255:40,0 chr2 152392197 . A . PASS END=152392197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 152392200 . C . PASS END=152392200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 152392204 . C . PASS END=152392309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:60:0,120,1800:0,164,255:40,0 chr2 152393646 . C . PASS END=152393750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,188,255:40,0 chr2 152394386 . A . PASS END=152394386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 152394387 . T . PASS END=152394387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1199:0,102,255:34,0 chr2 152394388 . C . PASS END=152394388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr2 152394389 . A . PASS END=152394490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:34:0,101,1235:0,101,255:40,0 chr2 152394654 . T . PASS END=152394758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:39:0,90,1350:0,117,255:40,0 chr2 152396858 . A . PASS END=152396963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:55:0,120,1800:0,136,255:40,0 chr2 152397209 . A . PASS END=152397209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 152397211 . C . PASS END=152397315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,136,255:40,0 chr2 152397960 . C . PASS END=152398065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,131,255:40,0 chr2 152398071 . C . PASS END=152398071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 152398073 . T . PASS END=152398073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 152402396 . C . PASS END=152402396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 152402400 . A . PASS END=152402400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 152402402 . C . PASS END=152402464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:64:0,120,1800:0,161,255:40,0 chr2 152402465 . G . PASS END=152402502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:81:62:0,81,1215:0,105,255:40,0 chr2 152402503 . G . PASS END=152402512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:63:45:0,63,1080:0,63,255:26,1 chr2 152402513 . C . PASS END=152402513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:33:45:0,33,1209:0,33,255:22,1 chr2 152402514 . T . PASS END=152402514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:69:44:0,69,1035:0,97,255:23,1 chr2 152402515 . T TA,TAA, 14.97 PASS DP=42;MQ=250.00;MQRankSum=5.369;ReadPosRankSum=0.612;FractionInformativeReads=0.952;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,10,8,0:0.250,0.200,0.000:40:16,4,5,0:6,6,3,0:14:20,0,50,22,92,72,43,83,136,126:255,0,255:22,24:1.4968e+01,1.6970e-01,5.3170e+01,2.1899e+01,9.7389e+01,7.4899e+01,7.3249e+01,1.1807e+02,1.7076e+02,1.5929e+02:0.00,5.00,8.00,5.00,10.00,8.00,34.77,39.77,39.77,37.77:10,12,6,12:12,10,7,11 chr2 152402848 . T . PASS END=152402848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1335:0,108,255:36,0 chr2 152402852 . C . PASS END=152402852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 152402854 . C . PASS END=152402854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 152402859 . C . PASS END=152402952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1215:0,87,255:40,0 chr2 152402953 . T . PASS END=152402957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 152403928 . C . PASS END=152403928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 152403943 . A . PASS END=152404047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,126,255:40,0 chr2 152404148 . C . PASS END=152404225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:45:0,119,1621:0,119,255:40,0 chr2 152404226 . T . PASS END=152404226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1143:0,68,255:38,0 chr2 152404227 . T . PASS END=152404253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:37:0,90,1350:0,97,255:40,0 chr2 152404258 . T . PASS END=152404258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,973:0,79,255:27,0 chr2 152404820 . A . PASS END=152404820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 152404822 . C . PASS END=152404929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:90:34:0,90,1320:0,100,255:40,0 chr2 152406150 . A . PASS END=152406233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1133:0,86,255:37,0 chr2 152406234 . C . PASS END=152406236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 152406237 . G . PASS END=152406237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 152406238 . C . PASS END=152406251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,939:0,64,255:26,0 chr2 152406252 . A . PASS END=152406252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:23,0 chr2 152406253 . T . PASS END=152406254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 152408245 . T . PASS END=152408245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 152408252 . C . PASS END=152408348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:42:0,90,1350:0,126,255:40,0 chr2 152408349 . T . PASS END=152408359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:32:0,72,1080:0,96,255:26,0 chr2 152409185 . C . PASS END=152409195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1141:0,80,255:32,0 chr2 152409196 . T . PASS END=152409196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr2 152409197 . G . PASS END=152409198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1151:0,96,255:32,0 chr2 152409199 . T . PASS END=152409199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 152409200 . T . PASS END=152409206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1225:0,96,255:33,0 chr2 152409207 . T . PASS END=152409207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1056:0,69,255:31,0 chr2 152409208 . T . PASS END=152409244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:31:0,85,1164:0,85,255:36,0 chr2 152409245 . G . PASS END=152409245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 152409246 . C . PASS END=152409259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 152409260 . T . PASS END=152409260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 152409261 . T . PASS END=152409263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:30,0 chr2 152409264 . T . PASS END=152409265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr2 152409266 . T . PASS END=152409266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 152409267 . C . PASS END=152409267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 152409268 . A . PASS END=152409270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 152409271 . A . PASS END=152409271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 152409272 . T . PASS END=152409274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 152409275 . G . PASS END=152409290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,892:0,61,255:25,0 chr2 152409295 . C . PASS END=152409295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 152409912 . A . PASS END=152410016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,106,1541:0,106,255:40,0 chr2 152410341 . C . PASS END=152410513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1215:0,84,255:40,0 chr2 152410514 . T . PASS END=152410521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 152410522 . A . PASS END=152410523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 152410524 . C . PASS END=152410528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 152410529 . C . PASS END=152410539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:20:0,36,540:0,60,255:13,0 chr2 152411429 . G . PASS END=152411429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 152411436 . C . PASS END=152411437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 152411445 . A . PASS END=152411558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:97:45:0,97,1621:0,97,255:40,0 chr2 152411561 . A . PASS END=152411562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,114,1710:0,126,255:39,0 chr2 152417106 . A . PASS END=152417128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,158,255:40,0 chr2 152417129 . T . PASS END=152417214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:93:36:0,93,1395:0,94,255:40,0 chr2 152417518 . A . PASS END=152417622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:80:0,120,1800:0,216,255:40,0 chr2 152417625 . G . PASS END=152417625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,253,255:40,0 chr2 152417717 . C . PASS END=152417717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 152417722 . C . PASS END=152417823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:33:0,81,1215:0,90,255:40,0 chr2 152417824 . T . PASS END=152417826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 152418622 . A . PASS END=152418622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 152418624 . C . PASS END=152418728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,102,1465:0,114,255:40,0 chr2 152419124 . C . PASS END=152419306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:36:0,81,1350:0,81,255:40,0 chr2 152419307 . G . PASS END=152419307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:30,0 chr2 152419308 . T . PASS END=152419317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,86,255:30,0 chr2 152419318 . T . PASS END=152419323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:29:0,65,1125:0,65,255:26,0 chr2 152419325 . A . PASS END=152419325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 152420120 . C . PASS END=152420233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,122,255:40,0 chr2 152420241 . G . PASS END=152420241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 152420322 . A . PASS END=152420322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 152420326 . G . PASS END=152420326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 152420337 . C . PASS END=152420444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,136,255:40,0 chr2 152420499 . C . PASS END=152420499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 152421557 . C . PASS END=152421662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:42:0,120,1800:0,126,255:40,0 chr2 152422015 . A . PASS END=152422036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,217,255:40,0 chr2 152422037 . A . PASS END=152422075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:83:0,120,1800:0,208,255:40,0 chr2 152422076 . C G, 47.10 PASS DP=85;MQ=250.00;MQRankSum=7.732;ReadPosRankSum=4.594;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,33,0:0.388,0.000:85:21,15,0:31,18,0:45:82,0,47,182,182,182:255,0,255:40,0:4.7099e+01,1.2814e-04,5.0000e+01,1.8187e+02,2.1664e+02,1.8488e+02:0.00,34.77,37.78,34.77,69.54,37.78:28,24,14,19:23,29,18,15 chr2 152422077 . T . PASS END=152422086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:73:0,120,1800:0,192,255:40,0 chr2 152422087 . A G, 47.77 PASS DP=74;MQ=250.00;MQRankSum=7.297;ReadPosRankSum=4.744;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,31,0:0.419,0.000:74:17,15,0:26,16,0:47:83,0,50,1096,1509,2605:255,0,255:40,0:4.7771e+01,9.4226e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,26,13,18:21,22,15,16 chr2 152422088 . T . PASS END=152422119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:66:0,120,1800:0,181,255:40,0 chr2 152422132 . G . PASS END=152422132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,120,1800:0,179,255:40,0 chr2 152422225 . C . PASS END=152422226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,177,255:40,0 chr2 152422229 . C . PASS END=152422334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:50:0,120,1800:0,150,255:40,0 chr2 152422336 . T . PASS END=152422336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 152423682 . A . PASS END=152423961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1125:0,82,255:40,0 chr2 152423962 . T . PASS END=152423962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 152423963 . T . PASS END=152423964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 152423965 . T . PASS END=152423965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 152423966 . G . PASS END=152423967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:27,0 chr2 152423968 . T . PASS END=152423995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,870:0,64,255:27,0 chr2 152423998 . C . PASS END=152423998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr2 152424585 . C . PASS END=152424692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,104,1427:0,104,255:40,1 chr2 152424830 . C . PASS END=152424888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:36:0,97,1276:0,97,255:40,0 chr2 152424889 . T . PASS END=152424921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:54:0,81,1215:0,104,255:40,0 chr2 152424922 . G . PASS END=152424931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:63:50:0,63,945:0,115,255:26,1 chr2 152424933 . TA T,TAA,TAAAA, 0.60 DRAGENIndelHardQUAL DP=46;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=-0.670;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:22,9,12,2,0:0.200,0.267,0.044,0.000:45:11,5,7,2,0:11,4,5,0,0:9:3,14,61,0,51,47,84,224,251,131,351,351,351,351,351:255,0,255:21,31:6.0491e-01,2.2980e+01,7.2980e+01,9.0315e+00,7.1374e+01,5.9031e+01,9.2645e+01,2.4417e+02,2.7128e+02,1.4265e+02,3.8405e+02,3.9505e+02,3.9505e+02,3.9505e+02,3.8706e+02:0.00,11.00,14.01,11.00,22.00,14.01,11.00,22.00,22.00,14.01,34.77,45.77,45.77,45.77,37.78:9,13,12,11:10,12,9,14 chr2 152425132 . A . PASS END=152425203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,134,255:40,0 chr2 152425204 . A . PASS END=152425204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:69:49:0,69,1540:0,69,255:36,0 chr2 152425205 . G . PASS END=152425230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:38:0,80,1136:0,80,255:39,0 chr2 152425779 . T . PASS END=152425779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 152425782 . C . PASS END=152425886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,114,1757:0,114,255:40,0 chr2 152426595 . A . PASS END=152426597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 152426598 . G . PASS END=152426604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 152426605 . A . PASS END=152426605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr2 152426606 . G . PASS END=152426606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 152426607 . T . PASS END=152426607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr2 152426608 . T . PASS END=152426617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,817:0,72,255:24,0 chr2 152426618 . T . PASS END=152426618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 152426619 . C . PASS END=152426619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 152426620 . T . PASS END=152426620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 152426621 . T . PASS END=152426621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 152426622 . G . PASS END=152426622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 152426623 . G . PASS END=152426626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:25,0 chr2 152426627 . G . PASS END=152426627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 152426628 . A . PASS END=152426631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 152426632 . A . PASS END=152426632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 152426633 . C . PASS END=152426633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 152426634 . A . PASS END=152426635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,831:0,44,255:22,0 chr2 152426636 . C . PASS END=152426636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 152426637 . G . PASS END=152426643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 152426644 . T . PASS END=152426645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr2 152426646 . G . PASS END=152426652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1155:0,80,255:31,0 chr2 152426653 . C . PASS END=152426653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:29,0 chr2 152426654 . A . PASS END=152426661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1202:0,83,255:30,0 chr2 152426662 . T . PASS END=152426662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:28,0 chr2 152426663 . G . PASS END=152426881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:32:0,83,1180:0,83,255:40,0 chr2 152426882 . T . PASS END=152426882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1115:0,45,255:29,0 chr2 152426883 . C . PASS END=152426891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1303:0,92,255:35,0 chr2 152426892 . A . PASS END=152426892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 152426893 . A . PASS END=152426906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:29,0 chr2 152427010 . C . PASS END=152427010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 152427011 . G . PASS END=152427011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr2 152427012 . T . PASS END=152427012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 152427013 . C . PASS END=152427014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,837:0,56,255:22,0 chr2 152427015 . C . PASS END=152427059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,62,255:24,0 chr2 152427060 . T . PASS END=152427060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr2 152427061 . C . PASS END=152427078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,853:0,66,255:22,0 chr2 152427079 . C . PASS END=152427089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,47,255:19,0 chr2 152427090 . T . PASS END=152427090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,662:0,24,255:12,0 chr2 152427091 . C . PASS END=152427100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:32:16:0,32,557:0,32,255:13,0 chr2 152427101 . C . PASS END=152427102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 152427103 . C . PASS END=152427107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 152427108 . T . PASS END=152427109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 152427110 . A . PASS END=152427110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 152427111 . A . PASS END=152427111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,382:0,25,255:11,0 chr2 152427112 . G . PASS END=152427113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 152427114 . T . PASS END=152427115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 152432206 . T . PASS END=152432206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 152432209 . A . PASS END=152432313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:94:39:0,94,1440:0,94,255:40,0 chr2 152432665 . A . PASS END=152432666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,831:0,69,255:26,0 chr2 152432667 . T . PASS END=152432667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,913:0,81,255:27,0 chr2 152432668 . A . PASS END=152432668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 152432669 . C . PASS END=152432670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 152432671 . A . PASS END=152432687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,929:0,65,255:26,0 chr2 152432688 . A . PASS END=152432690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 152432691 . T . PASS END=152432691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 152432692 . A . PASS END=152432695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr2 152432696 . A . PASS END=152432696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 152432697 . G . PASS END=152432848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:31:0,83,1141:0,83,255:40,0 chr2 152432849 . A . PASS END=152432852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:87:39:0,87,1305:0,87,255:30,0 chr2 152432853 . C . PASS END=152432855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:24,0 chr2 152432856 . C . PASS END=152432856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1164:0,50,255:23,0 chr2 152432857 . C . PASS END=152432864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:27:0,69,1035:0,81,255:25,0 chr2 152432865 . G . PASS END=152432865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:23,0 chr2 152432866 . G . PASS END=152432868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:25,0 chr2 152435852 . G . PASS END=152435859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:18,0 chr2 152435860 . G . PASS END=152435886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:21:0,62,723:0,62,255:26,0 chr2 152435887 . T C, 40.25 PASS DP=27;MQ=27.25;MQRankSum=1.308;ReadPosRankSum=3.331;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,16,0:0.593,0.000:27:10,8,0:1,8,0:32:75,0,30,556,393,949:255,0,255:11,0:4.0253e+01,2.5969e-03,3.2981e+01,4.5000e+02,4.2812e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,12,4:6,5,8,8 chr2 152435888 . C . PASS END=152435891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr2 152435892 . T . PASS END=152435892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 152435893 . C . PASS END=152435894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 152435895 . T . PASS END=152435896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 152435897 . C . PASS END=152435924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1103:0,90,255:30,0 chr2 152435925 . A . PASS END=152435931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 152435932 . G . PASS END=152435945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1014:0,68,255:26,0 chr2 152435946 . T . PASS END=152435949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 152435950 . T . PASS END=152435974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,978:0,78,255:26,0 chr2 152435975 . A . PASS END=152435983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr2 152435984 . G . PASS END=152435991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:24:0,48,720:0,62,255:18,0 chr2 152435992 . T . PASS END=152435992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,696:0,22,255:13,0 chr2 152435993 . G . PASS END=152436011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:19,0 chr2 152436012 . T G, 22.27 PASS DP=20;MQ=17.93;MQRankSum=1.426;ReadPosRankSum=1.823;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,7,0:0.350,0.000:20:8,5,0:5,2,0:22:57,0,30,250,428,678:211,0,255:13,0:2.2266e+01,2.8025e-02,3.3028e+01,2.5034e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,11,3,4:5,8,3,4 chr2 152436013 . T . PASS END=152436033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,493:0,40,255:19,0 chr2 152436034 . C . PASS END=152436034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:12,0 chr2 152436035 . C . PASS END=152436036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr2 152436037 . T . PASS END=152436040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,540:0,34,255:13,0 chr2 152436041 . G . PASS END=152436043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 152436044 . C . PASS END=152436049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr2 152436050 . G . PASS END=152436054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 152436055 . T . PASS END=152436055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr2 152436056 . C . PASS END=152436057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 152436058 . G . PASS END=152436058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr2 152436059 . C . PASS END=152436059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 152436060 . A . PASS END=152436061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:12:0,20,402:0,20,255:9,0 chr2 152436062 . C . PASS END=152436080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,358:0,33,255:11,0 chr2 152436081 . C . PASS END=152436092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 152436093 . G . PASS END=152436115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 152436116 . G . LowGQ END=152436163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,31:3,0 chr2 152437311 . G . LowDepth;LowGQ END=152437418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152437997 . A . PASS END=152437997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 152437998 . T . PASS END=152438031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr2 152438032 . G . PASS END=152438032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 152438033 . C . PASS END=152438042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 152438043 . G . PASS END=152438067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 152438068 . C . PASS END=152438068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 152438069 . C . PASS END=152438101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,483:0,45,255:15,0 chr2 152438978 . C . LowDepth;LowGQ END=152439084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,16:1,0 chr2 152439085 . A . LowDepth;LowGQ END=152439181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152439969 . A . PASS END=152440154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:2,0 chr2 152440155 . C . PASS END=152440165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 152440166 . T . PASS END=152440187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:3:0,9,108:0,9,108:3,0 chr2 152440188 . A . PASS END=152440216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:5,0 chr2 152440217 . C . PASS END=152440280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:8,0 chr2 152442021 . C . LowDepth;LowGQ END=152442128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152442919 . A . LowDepth;LowGQ END=152443023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152443888 . C . LowDepth;LowGQ END=152444091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152446403 . G . LowDepth;LowGQ END=152446714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152447862 . A . PASS END=152447969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:99:52:0,120,1800:0,144,255:40,0 chr2 152448548 . A . PASS END=152448652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:62:0,120,1800:0,184,255:40,0 chr2 152449530 . C . LowDepth;LowGQ END=152449567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152449568 . C . LowDepth;LowGQ END=152449584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr2 152449585 . A . LowDepth END=152449621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 152449622 . A T, 5.44 DRAGENSnpHardQUAL;LowDepth DP=1;MQ=11.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,1,0:1.000,0.000:1:0,0,0:0,1,0:2:39,3,0,39,3,39:39,3,0:0,0:5.4450e+00,4.4763e+00,4.4666e+00,4.0215e+01,3.9246e+01,4.3215e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,0:0,0,0,1 chr2 152449623 . C . LowDepth;LowGQ END=152449659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,0:1,0 chr2 152449660 . C . LowDepth;LowGQ END=152449733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:1,0 chr2 152450521 . A . PASS END=152450557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 152450558 . A . PASS END=152450584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr2 152450585 . C . PASS END=152450586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 152450587 . C . LowGQ END=152450587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr2 152450588 . T . PASS END=152450595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr2 152450596 . A . PASS END=152450596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:11,0 chr2 152450597 . T . PASS END=152450614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,398:0,36,255:12,0 chr2 152450615 . T . PASS END=152450616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 152450617 . G . PASS END=152450619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 152450620 . A . PASS END=152450642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 152450643 . C . PASS END=152450652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 152450653 . T . PASS END=152450653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 152450654 . G . PASS END=152450656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 152450657 . A . PASS END=152450657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:11,0 chr2 152450658 . T . PASS END=152450661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 152450662 . G . PASS END=152450671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 152450672 . G . PASS END=152450672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 152450673 . T . PASS END=152450688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 152450689 . A . PASS END=152450690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 152450691 . A . PASS END=152450691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,381:0,25,255:12,0 chr2 152450692 . C . PASS END=152450711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 152450712 . A . PASS END=152450712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:9,0 chr2 152450713 . T . PASS END=152450726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:11,0 chr2 152450727 . G . PASS END=152450730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 152450731 . C . PASS END=152450731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:7,0 chr2 152450732 . T . PASS END=152450741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,288:0,24,255:8,0 chr2 152450742 . G . PASS END=152450750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr2 152450751 . A . PASS END=152450752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 152450753 . A . PASS END=152450753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:13,0 chr2 152450754 . C . PASS END=152450754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 152450755 . T . PASS END=152450755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr2 152450756 . G . PASS END=152450764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 152450765 . T . PASS END=152450765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 152450766 . C . PASS END=152450767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:13:0,31,490:0,31,255:14,0 chr2 152450768 . T . PASS END=152450769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,560:0,48,255:16,0 chr2 152450770 . T . PASS END=152450770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 152450771 . T . PASS END=152450773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 152450774 . A . PASS END=152450774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 152450775 . G . PASS END=152450775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 152450776 . G . PASS END=152450776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 152450777 . G . PASS END=152450787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,623:0,51,255:18,0 chr2 152450788 . C . PASS END=152450788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 152450789 . A . PASS END=152450789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 152450790 . T . PASS END=152450794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 152450795 . T . PASS END=152450795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 152450796 . G . PASS END=152450799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 152450800 . C . PASS END=152450812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr2 152450813 . T . PASS END=152450813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 152450814 . A . PASS END=152450820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,654:0,41,255:19,0 chr2 152450821 . T . PASS END=152450824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 152450825 . T . PASS END=152450825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr2 152450826 . A . PASS END=152450832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 152452574 . C . LowDepth;LowGQ END=152452681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152453472 . A . LowDepth;LowGQ END=152453576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152454441 . C . LowDepth;LowGQ END=152454644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152456955 . C . LowDepth;LowGQ END=152457267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152458414 . C . LowDepth END=152458522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:1,0 chr2 152458530 . C . LowDepth END=152458530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,39:0,3,39:1,0 chr2 152459095 . T . LowDepth;LowGQ END=152459095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152459101 . A . LowDepth;LowGQ END=152459205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152460075 . G . PASS END=152460075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 152460083 . C . PASS END=152460088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr2 152460089 . G . PASS END=152460286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:130,0:130:93:33:0,93,1395:0,99,255:40,0 chr2 152460288 . T . PASS END=152460288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:97:0,120,1800:0,255,255:40,0 chr2 152461070 . G . LowDepth;LowGQ END=152461070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152461074 . A . LowDepth;LowGQ END=152461162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152461163 . C . PASS END=152461385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,16:0,3,16:3,0 chr2 152463115 . C . PASS END=152463116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 152463120 . C . PASS END=152463126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:25,0 chr2 152463127 . G . PASS END=152463127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 152463128 . C . PASS END=152463130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,825:0,61,255:26,0 chr2 152463131 . T . PASS END=152463138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,962:0,81,255:28,0 chr2 152463139 . G . PASS END=152463139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 152463140 . A . PASS END=152463156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1233:0,86,255:32,0 chr2 152463157 . A . PASS END=152463157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr2 152463158 . T . PASS END=152463160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 152463161 . C . PASS END=152463161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 152463162 . A . PASS END=152463191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1241:0,89,255:33,0 chr2 152463192 . C . PASS END=152463192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 152463193 . T . PASS END=152463194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 152463195 . C . PASS END=152463227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 152464017 . C . PASS END=152464061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:12,0 chr2 152464062 . G . PASS END=152464064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 152464065 . T . PASS END=152464065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:6,0 chr2 152464066 . A . PASS END=152464070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 152464071 . A . PASS END=152464086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,217:0,18,217:6,0 chr2 152464087 . G . PASS END=152464097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:6:5:0,6,90:0,15,186:3,0 chr2 152464098 . T . PASS END=152464117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr2 152464118 . A . PASS END=152464122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 152464984 . T . LowDepth;LowGQ END=152464984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152464987 . C . LowDepth;LowGQ END=152465019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 152465020 . G . LowDepth;LowGQ END=152465190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:1,0 chr2 152466321 . A . PASS END=152466321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 152466323 . A . PASS END=152466326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 152466327 . C . PASS END=152466634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,108,1620:0,113,255:40,1 chr2 152467022 . G . PASS END=152467022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 152467029 . C . PASS END=152467137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1260:0,92,255:40,0 chr2 152467271 . C . PASS END=152467271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152467273 . T . PASS END=152467273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 152467275 . C . PASS END=152467381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1800:0,130,255:40,0 chr2 152467387 . G . PASS END=152467387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 152468700 . C . PASS END=152468715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,892:0,72,255:26,0 chr2 152468716 . G . PASS END=152468719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:28,0 chr2 152468720 . T . PASS END=152468720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,889:0,67,255:27,0 chr2 152468721 . A . PASS END=152468722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr2 152468723 . T . PASS END=152468723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:29,0 chr2 152468724 . C . PASS END=152468738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,961:0,90,255:32,0 chr2 152468739 . T . PASS END=152468739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr2 152468740 . T . PASS END=152468857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1260:0,88,255:40,0 chr2 152468858 . C . PASS END=152468866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,80,255:26,1 chr2 152468867 . T . PASS END=152468867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:52:29:0,52,1012:0,52,255:22,1 chr2 152468868 . G . PASS END=152468878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,854:0,61,255:22,0 chr2 152468879 . A . PASS END=152468880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 152468881 . T . PASS END=152468882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 152468883 . A . PASS END=152468885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,709:0,49,255:20,0 chr2 152468886 . A . PASS END=152468887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 152468888 . C . PASS END=152468903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,51,255:19,0 chr2 152468905 . T . PASS END=152468905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 152468916 . T . PASS END=152468916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 152470790 . A . PASS END=152470795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr2 152470796 . C . PASS END=152470799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 152470800 . A . PASS END=152470800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 152470801 . G . PASS END=152471029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:31:0,90,1202:0,93,255:40,0 chr2 152471030 . C . PASS END=152471030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:32,0 chr2 152471031 . G . PASS END=152471048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:27:0,81,1008:0,81,255:33,0 chr2 152471049 . C . PASS END=152471049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:26,0 chr2 152471050 . G . PASS END=152471071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:20:0,60,745:0,60,255:26,0 chr2 152471072 . C . PASS END=152471082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,59,255:16,0 chr2 152471083 . A . PASS END=152471084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 152471085 . C . PASS END=152471101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:8:0,24,288:0,24,255:9,0 chr2 152472515 . C . PASS END=152472526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1109:0,84,255:30,0 chr2 152472527 . T . PASS END=152472527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr2 152472528 . A . PASS END=152472529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 152472530 . C . PASS END=152472530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 152472531 . T . PASS END=152472531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,878:0,18,255:25,0 chr2 152472532 . C . PASS END=152472532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 152472533 . T . PASS END=152472533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 152472534 . T . PASS END=152472538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 152472539 . C . PASS END=152472539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 152472540 . C . PASS END=152472540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 152472541 . T . PASS END=152472541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 152472542 . T . PASS END=152472600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:30:0,85,1286:0,85,255:40,0 chr2 152472601 . T . PASS END=152472602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 152472603 . C . PASS END=152472611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 152472612 . T . PASS END=152472612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:27,0 chr2 152472613 . T . PASS END=152472623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 152472631 . A . PASS END=152472631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 152473875 . T . PASS END=152473876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,207,255:40,0 chr2 152473878 . A . PASS END=152473936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:75:0,120,1800:0,209,255:40,0 chr2 152473937 . C . PASS END=152473983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:81:49:0,81,1215:0,134,255:40,0 chr2 152474777 . T . PASS END=152474777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 152474788 . C . PASS END=152474805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr2 152474806 . C . PASS END=152474813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1025:0,87,255:30,0 chr2 152474814 . T . PASS END=152474814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:28,0 chr2 152474815 . T . PASS END=152474820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 152474821 . G . PASS END=152474821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:31,0 chr2 152474822 . C . PASS END=152474830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1188:0,96,255:37,0 chr2 152474831 . C . PASS END=152474831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:36,0 chr2 152474832 . G . PASS END=152474985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,86,255:40,0 chr2 152474986 . A . PASS END=152474988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:73:30:0,73,1025:0,73,255:26,0 chr2 152474989 . A . PASS END=152474989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:24,0 chr2 152474990 . A . PASS END=152474992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,978:0,70,255:26,0 chr2 152475964 . C . PASS END=152476257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,1033:0,84,255:40,0 chr2 152476258 . A . PASS END=152476276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:26,0 chr2 152477432 . C . PASS END=152477540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:33:0,93,1395:0,99,255:40,0 chr2 152482043 . C . PASS END=152482043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 152482048 . C . PASS END=152482152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,99,1485:0,115,255:40,0 chr2 152483516 . C . PASS END=152483703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:32:0,80,1089:0,80,255:40,0 chr2 152483704 . C . PASS END=152483704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:32,0 chr2 152483705 . A . PASS END=152483719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1163:0,80,255:34,0 chr2 152483728 . A . PASS END=152483728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 152484037 . A . PASS END=152484070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1194:0,80,255:37,0 chr2 152484071 . A . PASS END=152484071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:34,0 chr2 152484072 . T . PASS END=152484309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:37:0,81,1215:0,98,255:40,0 chr2 152484310 . G . PASS END=152484348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,884:0,61,255:25,0 chr2 152484355 . T . PASS END=152484355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 152486049 . T . PASS END=152486049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 152486052 . C . PASS END=152486053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 152486054 . T . PASS END=152486054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 152486055 . C . PASS END=152486162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:31:0,93,1089:0,93,255:40,0 chr2 152487225 . C . PASS END=152487225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 152487229 . C . PASS END=152487333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:42:0,93,1395:0,110,255:40,0 chr2 152487334 . C . PASS END=152487334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1332:0,70,255:29,0 chr2 152487335 . T . PASS END=152487335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:29,0 chr2 152487657 . C . PASS END=152487821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,102,255:40,0 chr2 152487822 . A . PASS END=152487822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:27,0 chr2 152487823 . A . PASS END=152487825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 152487826 . C . PASS END=152487850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr2 152487851 . T . PASS END=152487855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 152487856 . A . PASS END=152487860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 152490167 . C . PASS END=152490181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:17,0 chr2 152490182 . C . PASS END=152490193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,592:0,51,255:17,0 chr2 152490194 . G . PASS END=152490194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 152490195 . A . PASS END=152490208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,651:0,47,255:19,0 chr2 152490209 . C . PASS END=152490209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 152490210 . G . PASS END=152490210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 152490211 . C . PASS END=152490216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,808:0,66,255:22,0 chr2 152490217 . T . PASS END=152490217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 152490218 . C . PASS END=152490218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 152490219 . A G, 49.92 PASS DP=25;MQ=183.94;MQRankSum=-0.626;ReadPosRankSum=1.768;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:5,7,0:8,5,0:48:85,0,50,426,465,891:255,0,255:12,0:4.9915e+01,6.6010e-05,5.3000e+01,4.2636e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,7,5:7,6,4,8 chr2 152490220 . G . PASS END=152490256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 152490257 . C . PASS END=152490281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr2 152490282 . C . PASS END=152490420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,956:0,81,255:40,0 chr2 152490421 . A . PASS END=152490428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr2 152490429 . G . PASS END=152490444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:21:0,63,784:0,63,255:26,0 chr2 152490445 . C . PASS END=152490445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 152490446 . C . PASS END=152490457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr2 152490458 . A G, 112.75 PASS DP=22;MQ=223.68;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,13,0:0,9,0:63:151,66,0,816,66,816:255,66,0:0,0:1.1275e+02,6.2753e+01,2.3297e-06,4.5000e+02,9.7523e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,14:0,0,11,11 chr2 152490459 . G . PASS END=152490464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 152490465 . A . PASS END=152490479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr2 152492740 . C . PASS END=152492753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,986:0,75,255:26,0 chr2 152492754 . T . PASS END=152492778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr2 152492779 . T . PASS END=152492831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,768:0,63,255:26,0 chr2 152492832 . G . PASS END=152492844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,47,255:17,0 chr2 152492845 . G . PASS END=152492848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 152495792 . A . PASS END=152495792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 152495794 . C . PASS END=152495898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1215:0,102,255:40,0 chr2 152496370 . C . PASS END=152496372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr2 152496373 . T . PASS END=152496373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 152496374 . G . PASS END=152496574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:36:0,87,1319:0,87,255:40,0 chr2 152496577 . G . PASS END=152496577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 152496869 . A . PASS END=152496869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 152496870 . T . PASS END=152496870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 152496871 . C . PASS END=152496905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:24,0 chr2 152496906 . A . PASS END=152496906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 152496907 . C . PASS END=152496910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 152496911 . G . PASS END=152496933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 152496934 . A . PASS END=152496934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr2 152496935 . C . PASS END=152496938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 152496939 . T . PASS END=152496939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 152496940 . G . PASS END=152496945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 152496946 . A . PASS END=152496946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 152496947 . G . PASS END=152496979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,89,255:32,0 chr2 152496980 . G . PASS END=152496980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1111:0,68,255:28,0 chr2 152496981 . C . PASS END=152497084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:28:0,82,1055:0,82,255:39,0 chr2 152497085 . C . PASS END=152497111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 152497112 . G . PASS END=152497133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:18,0 chr2 152497134 . C . PASS END=152497161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 152497162 . A . PASS END=152497163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 152497164 . C . PASS END=152497181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:5:0,15,164:0,15,164:5,0 chr2 152499088 . T . PASS END=152499099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,108,1574:0,113,255:39,0 chr2 152499100 . A . PASS END=152499100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1427:0,74,255:40,0 chr2 152499101 . T . PASS END=152499195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:97:43:0,97,1659:0,97,255:40,0 chr2 152499276 . T . PASS END=152499276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 152499278 . C . PASS END=152499383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:54:0,120,1800:0,146,255:40,0 chr2 152499664 . A . PASS END=152499840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:36:0,92,1280:0,92,255:40,0 chr2 152499841 . C . PASS END=152499850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,900:0,60,255:26,0 chr2 152499851 . T . PASS END=152499867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:19,0 chr2 152500328 . T . PASS END=152500328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 152500332 . A . PASS END=152500344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:19,0 chr2 152500345 . T . PASS END=152500352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 152500353 . C . PASS END=152500354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 152500355 . G . PASS END=152500356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 152500357 . C . PASS END=152500357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 152500358 . G . PASS END=152500360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 152500361 . C . PASS END=152500361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 152500362 . A . PASS END=152500370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 152500371 . A . PASS END=152500371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 152500372 . T . PASS END=152500375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr2 152500376 . T . PASS END=152500376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:24,0 chr2 152500377 . C . PASS END=152500378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 152500379 . G . PASS END=152500384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 152500385 . G . PASS END=152500392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:25,0 chr2 152500393 . G . PASS END=152500411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1117:0,80,255:33,0 chr2 152500412 . T . PASS END=152500448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:36:0,95,1303:0,95,255:40,0 chr2 152500449 . C G, 48.38 PASS DP=49;MQ=94.97;MQRankSum=-0.170;ReadPosRankSum=1.150;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,24,0:0.490,0.000:49:17,7,0:8,17,0:44:83,0,43,183,183,183:255,0,255:25,0:4.8383e+01,1.6956e-04,4.6100e+01,1.8315e+02,2.1792e+02,1.8616e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,9,14,10:16,9,13,11 chr2 152500450 . T . PASS END=152500486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,131,255:40,0 chr2 152500487 . T . PASS END=152500626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:31:0,84,1255:0,86,255:40,0 chr2 152500627 . C . PASS END=152500643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:25,0 chr2 152500657 . A . PASS END=152500657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 152500982 . T . PASS END=152501089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,116,1604:0,116,255:40,0 chr2 152501092 . G . PASS END=152501092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 152502269 . C . PASS END=152502269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 152502644 . A . PASS END=152502748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:46:0,110,1649:0,110,255:40,0 chr2 152502750 . T . PASS END=152502750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr2 152506690 . A . PASS END=152506894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:38:0,108,1473:0,108,255:40,0 chr2 152506898 . G . PASS END=152506898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 152507075 . A . PASS END=152507075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 152507086 . A . PASS END=152507086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:20,0 chr2 152507088 . C . PASS END=152507093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,725:0,63,255:23,0 chr2 152507094 . T . PASS END=152507094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 152507095 . T . PASS END=152507095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 152507096 . G . PASS END=152507097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 152507098 . A . PASS END=152507101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,809:0,69,255:23,0 chr2 152507102 . C . PASS END=152507102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 152507103 . A . PASS END=152507105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 152507106 . A . PASS END=152507106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,806:0,38,255:22,0 chr2 152507107 . A . PASS END=152507107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,672:0,52,255:22,0 chr2 152507108 . C . PASS END=152507119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr2 152507120 . G . PASS END=152507122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 152507123 . C . PASS END=152507129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:25,0 chr2 152507130 . G . PASS END=152507164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1125:0,80,255:35,0 chr2 152507165 . A . PASS END=152507165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:34,0 chr2 152507166 . G . PASS END=152507399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:35:0,81,1152:0,81,255:40,0 chr2 152507406 . T . PASS END=152507406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:34,0 chr2 152510506 . A . PASS END=152510613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,142,255:40,0 chr2 152510615 . T . PASS END=152510615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 152511779 . T . PASS END=152511779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 152511784 . C . PASS END=152511888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:47:0,120,1800:0,124,255:40,0 chr2 152512331 . C . PASS END=152512537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:38:0,96,1316:0,98,255:40,0 chr2 152512667 . A . PASS END=152512978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,102,1530:0,134,255:40,0 chr2 152512980 . T . PASS END=152512980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 152514495 . A . PASS END=152514606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:57:0,120,1800:0,139,255:40,0 chr2 152515576 . T . PASS END=152515576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 152515578 . C . PASS END=152515683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,167,255:40,0 chr2 152515688 . G . PASS END=152515688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 152518649 . T . PASS END=152518843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:84:47:0,84,1260:0,102,255:40,0 chr2 152518844 . C . PASS END=152518855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:69:31:0,69,1035:0,77,255:25,0 chr2 152520047 . G . PASS END=152520047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr2 152520057 . C . PASS END=152520057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1426:0,111,255:37,0 chr2 152520062 . A . PASS END=152520329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1215:0,84,255:40,0 chr2 152520330 . A . PASS END=152520346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr2 152520347 . T . PASS END=152520356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:22:0,57,855:0,66,255:19,0 chr2 152520357 . G . PASS END=152520363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 152520364 . T . PASS END=152520373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,751:0,47,255:18,0 chr2 152520375 . T . PASS END=152520375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 152521003 . G . PASS END=152521003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 152521015 . A . PASS END=152521123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,110,1520:0,110,255:40,0 chr2 152521273 . A . PASS END=152521377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:43:0,111,1665:0,129,255:40,0 chr2 152521847 . C . PASS END=152522036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:33:0,81,1215:0,84,255:40,0 chr2 152522037 . T . PASS END=152522040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:31:0,57,855:0,93,255:19,0 chr2 152522041 . A . PASS END=152522052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,76,255:22,0 chr2 152522053 . T . PASS END=152522053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,970:0,53,255:23,0 chr2 152522603 . C . PASS END=152522606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 152522607 . A . PASS END=152522607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 152522608 . C . PASS END=152522620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:31,0 chr2 152522621 . T . PASS END=152522621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 152522622 . G . PASS END=152522629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:31:0,93,1141:0,93,255:38,0 chr2 152522630 . T . PASS END=152522630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:37,0 chr2 152522631 . G . PASS END=152522915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:34:0,84,1260:0,88,255:40,0 chr2 152522917 . T . PASS END=152522917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 152524316 . A . PASS END=152524316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr2 152524318 . A . PASS END=152524425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:42:0,105,1575:0,110,255:40,0 chr2 152525541 . A . PASS END=152525645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,108,1436:0,112,255:40,0 chr2 152525647 . T . PASS END=152525648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:41:0,96,1440:0,123,255:35,0 chr2 152527536 . C . PASS END=152527539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 152527540 . A . PASS END=152527549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 152527550 . T . PASS END=152527550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 152527551 . T . PASS END=152527571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:29:0,84,1260:0,87,255:40,0 chr2 152527572 . C T, 184.99 PASS DP=46;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,26,0:0,20,0:135:223,138,0,1744,138,1744:255,138,0:0,0:1.8499e+02,1.3499e+02,0.0000e+00,4.5000e+02,1.6976e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,13:0,0,25,21 chr2 152527573 . C . PASS END=152527609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,136,255:40,0 chr2 152527610 . G . PASS END=152527731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:87:39:0,87,1305:0,87,255:40,0 chr2 152527732 . T . PASS END=152527732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:29,0 chr2 152527733 . T . PASS END=152527743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1395:0,97,255:34,0 chr2 152527745 . T . PASS END=152527745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 152528876 . T . PASS END=152528876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 152528879 . T . PASS END=152528879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 152528883 . A . PASS END=152529195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:87:36:0,87,1304:0,94,255:40,0 chr2 152530989 . A . PASS END=152531039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:35:0,102,1296:0,105,255:40,0 chr2 152531040 . T . PASS END=152531076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:36:0,97,1319:0,97,255:40,0 chr2 152531077 . A G, 151.88 PASS DP=36;MQ=250.00;FractionInformativeReads=0.972 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:102:190,105,0,1320,105,1320:255,108,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,16,19 chr2 152531078 . C . PASS END=152531097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,90,255:34,0 chr2 152531098 . C . PASS END=152531098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 152531099 . C . PASS END=152531099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 152531100 . T . PASS END=152531100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr2 152531793 . C . PASS END=152531793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152531799 . A . PASS END=152531905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,111,1665:0,127,255:40,0 chr2 152531927 . A . PASS END=152531927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 152534075 . T . PASS END=152534075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 152534077 . A . PASS END=152534099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:26,0 chr2 152534100 . C . PASS END=152534285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:28:0,81,1070:0,84,255:40,0 chr2 152534383 . C . PASS END=152534383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 152534389 . C . PASS END=152534701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:39:0,90,1435:0,90,255:40,0 chr2 152536231 . T . PASS END=152536236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:82:40:0,82,1410:0,82,255:40,0 chr2 152536237 . C . PASS END=152536237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:37,0 chr2 152536238 . A . PASS END=152536238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 152536239 . C . PASS END=152536242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:60:44:0,60,1488:0,60,255:40,0 chr2 152536243 . C . PASS END=152536251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:45:0,83,1551:0,83,255:40,0 chr2 152536252 . T . PASS END=152536252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1574:0,69,255:40,0 chr2 152536253 . G . PASS END=152536258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,102,1638:0,102,255:40,0 chr2 152536259 . T . PASS END=152536259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:55:47:0,55,1543:0,55,255:40,0 chr2 152536260 . T . PASS END=152536304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:86:47:0,86,1661:0,86,255:40,0 chr2 152536305 . T . PASS END=152536305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:34:48:0,34,1527:0,34,255:40,0 chr2 152536306 . T . PASS END=152536342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:48:0,81,1601:0,81,255:40,0 chr2 152536430 . A . PASS END=152536430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152536432 . C . PASS END=152536460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:83:46:0,83,1604:0,83,255:40,0 chr2 152536461 . C . PASS END=152536497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,102,1530:0,102,255:40,0 chr2 152536498 . T A, 170.40 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,20,0:0,21,0:120:208,123,0,1574,123,1574:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,20:0,0,20,21 chr2 152536499 . T . PASS END=152536524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,95,255:36,0 chr2 152536525 . T . PASS END=152536528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 152536529 . T . PASS END=152536532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:27,0 chr2 152536533 . C . PASS END=152536535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,80,255:26,0 chr2 152536536 . T . PASS END=152536537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 152537237 . C . PASS END=152537237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1573:0,99,255:40,0 chr2 152537243 . C . LowGQ END=152537243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,11:50:0:50:0,0,995:106,0,255:38,0 chr2 152537244 . A . PASS END=152537244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:61:50:0,61,1365:0,61,255:40,0 chr2 152537245 . T . PASS END=152537250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:51:0,96,1646:0,96,255:40,0 chr2 152537251 . C . PASS END=152537251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:46:59:0,46,1623:0,46,255:40,0 chr2 152537252 . T . PASS END=152537280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,152,255:40,0 chr2 152537281 . G . PASS END=152537343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:55:0,120,1800:0,123,255:40,0 chr2 152539170 . C . PASS END=152539170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 152539175 . C . PASS END=152539283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,99,1485:0,104,255:40,0 chr2 152541292 . A . PASS END=152541297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:26,0 chr2 152541298 . C . PASS END=152541300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr2 152541301 . C . PASS END=152541301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 152541302 . A . PASS END=152541466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:31:0,82,1133:0,82,255:40,0 chr2 152541467 . T . PASS END=152541467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 152541468 . C . PASS END=152541472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 152541473 . T . PASS END=152541473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1019:0,62,255:26,0 chr2 152541474 . C . PASS END=152541475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 152541476 . T . PASS END=152541476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 152541477 . T . PASS END=152541481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 152541482 . T . PASS END=152541482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr2 152541483 . A . PASS END=152541489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 152541943 . T . PASS END=152541943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 152543933 . A . PASS END=152544046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:45:0,104,1607:0,104,255:40,1 chr2 152544134 . A . PASS END=152544134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 152544138 . A . PASS END=152544138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 152544140 . A . PASS END=152544248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:42:0,102,1530:0,126,255:40,0 chr2 152544253 . C . PASS END=152544253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 152544800 . A . PASS END=152544800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1388:0,108,255:36,0 chr2 152544803 . T . PASS END=152544910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:80:36:0,80,1352:0,80,255:40,0 chr2 152547239 . A . PASS END=152547239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:58:0,119,2047:0,119,255:40,0 chr2 152547241 . A . PASS END=152547339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,119,1800:0,119,255:40,0 chr2 152547341 . T . PASS END=152547341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 152548373 . C . PASS END=152548373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 152548377 . C . PASS END=152548482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:44:0,120,1800:0,132,255:40,0 chr2 152548490 . G . PASS END=152548490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 152548570 . T . PASS END=152548570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,191,255:40,0 chr2 152548573 . A . PASS END=152548680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,170,255:40,0 chr2 152548775 . C . PASS END=152548877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:41:0,102,1530:0,109,255:40,0 chr2 152550837 . A . PASS END=152550950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:95:38:0,95,1383:0,95,255:40,2 chr2 152551030 . A . PASS END=152551030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 152551036 . A . PASS END=152551143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:50:0,120,1800:0,150,255:40,0 chr2 152551149 . C . PASS END=152551149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 152552089 . T . PASS END=152552099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:85:0,120,1800:0,222,255:40,0 chr2 152552100 . A . PASS END=152552196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:90:0,120,1800:0,224,255:40,0 chr2 152552198 . T . PASS END=152552198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:100:0,120,1800:0,255,255:40,0 chr2 152553148 . T . PASS END=152553148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:53:0,120,1800:0,126,255:40,0 chr2 152553150 . C . PASS END=152553250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:46:0,114,1710:0,117,255:40,0 chr2 152553659 . T . PASS END=152553659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 152553661 . C . PASS END=152553766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:52:0,120,1800:0,153,255:40,0 chr2 152553768 . T . PASS END=152553768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 152553770 . T . PASS END=152553770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 152553850 . G . PASS END=152553850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 152553859 . C . PASS END=152553859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,217,255:40,0 chr2 152553862 . A . PASS END=152553862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,222,255:40,0 chr2 152553864 . A . PASS END=152553971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,209,255:40,0 chr2 152553973 . T . PASS END=152553973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 152553978 . G . PASS END=152553978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,233,255:40,0 chr2 152554058 . A . PASS END=152554162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:67:0,120,1800:0,135,255:40,2 chr2 152554164 . T . PASS END=152554164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 152563390 . C . PASS END=152563390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 152563394 . C . PASS END=152563511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:32:0,87,1395:0,87,255:40,0 chr2 152566164 . T . PASS END=152566164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 152566170 . C . PASS END=152566277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:68:0,120,1800:0,159,255:40,2 chr2 152566947 . C . PASS END=152567052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:65:0,120,1800:0,171,255:40,0 chr2 152567054 . T . PASS END=152567054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 152573929 . C . PASS END=152573980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,108,1435:0,111,255:40,0 chr2 152573981 . A G, 187.99 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,18,0:0,29,0:138:226,141,0,1788,141,1788:255,141,0:0,0:1.8799e+02,1.3799e+02,0.0000e+00,4.5000e+02,1.7276e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,18:0,0,22,25 chr2 152573982 . G . PASS END=152574018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,108,1543:0,120,255:40,0 chr2 152574019 . C . PASS END=152574034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1466:0,107,255:40,0 chr2 152579895 . C . PASS END=152580002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,102,1530:0,107,255:40,0 chr2 152580774 . C . PASS END=152580871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1141:0,80,255:40,0 chr2 152580872 . A . PASS END=152580872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr2 152580873 . T . PASS END=152580878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:33,0 chr2 152581370 . C . PASS END=152581475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:58:0,120,1800:0,136,255:40,0 chr2 152581963 . C . PASS END=152581963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152581967 . C . PASS END=152582075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,150,255:40,0 chr2 152584203 . A . PASS END=152584203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 152584205 . T . PASS END=152584206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:32,0 chr2 152584207 . G . PASS END=152584207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:31,0 chr2 152584208 . G . PASS END=152584351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:82:32:0,82,1081:0,82,255:40,0 chr2 152584352 . T . PASS END=152584352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1237:0,70,255:36,0 chr2 152584353 . T . PASS END=152584380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:38:0,96,1352:0,100,255:39,0 chr2 152584381 . A . PASS END=152584399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:29:0,66,990:0,87,255:26,0 chr2 152584400 . C . PASS END=152584404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 152584405 . A . PASS END=152584420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,939:0,64,255:26,0 chr2 152586128 . C . PASS END=152586171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,157,255:40,0 chr2 152589634 . C . PASS END=152589658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,184,255:40,0 chr2 152589659 . G . PASS END=152589670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,171,255:40,0 chr2 152590909 . T . PASS END=152590909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 152590965 . C . PASS END=152590965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 152590993 . G . PASS END=152590993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:11,0 chr2 152659790 . T . PASS END=152659838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,2:77:99:71:0,120,1800:0,176,255:40,0 chr2 152663335 . C . PASS END=152663486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:36:0,108,1329:0,108,255:40,0 chr2 152667070 . T . PASS END=152667075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1274:0,102,255:34,0 chr2 152668871 . C . PASS END=152668946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:38:0,99,1275:0,100,255:40,0 chr2 152668947 . A . PASS END=152668947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:33,0 chr2 152668948 . T . PASS END=152668954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:38:0,80,1168:0,80,255:35,0 chr2 152670683 . C . PASS END=152670812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:38:0,81,1215:0,89,255:40,0 chr2 152670813 . A . PASS END=152670830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 152671653 . A . PASS END=152671713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:56:0,120,1800:0,137,255:40,0 chr2 152684645 . C . PASS END=152684646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 152684647 . T . PASS END=152684647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 152684648 . G . PASS END=152684650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 152684651 . G . PASS END=152684651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr2 152684652 . A . PASS END=152684653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 152684654 . T . PASS END=152684656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 152684657 . A . PASS END=152684659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 152684660 . G . PASS END=152684661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 152684662 . C . PASS END=152684670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:30:19:0,30,450:0,40,255:12,0 chr2 152684671 . C . PASS END=152684674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:24:16:0,24,360:0,41,255:9,0 chr2 152684675 . T . PASS END=152684675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:8,0 chr2 152684676 . G . PASS END=152684678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 152684679 . G . LowGQ END=152684679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,526:4,0,255:7,0 chr2 152684680 . A . PASS END=152684688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:21:16:0,21,315:0,31,255:9,0 chr2 152684689 . A . PASS END=152684690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:18:15:0,18,270:0,45,255:6,0 chr2 152689450 . T . PASS END=152689450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 152689562 . A . PASS END=152689562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 152689637 . A . PASS END=152689637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,105,1575:0,144,255:35,0 chr2 152689656 . C . PASS END=152689656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 152689770 . A . PASS END=152689770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 152689779 . T . PASS END=152689779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 152689954 . C . PASS END=152689954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 152690146 . A . PASS END=152690146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 152690200 . T . PASS END=152690200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,202,255:40,0 chr2 152690215 . A . PASS END=152690215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,203,255:40,0 chr2 152690377 . C . PASS END=152690377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 152690398 . A . PASS END=152690398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr2 152690491 . G . PASS END=152690491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 152690511 . G . PASS END=152690511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 152690599 . C . PASS END=152690599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,117,1755:0,118,255:38,0 chr2 152690611 . T . PASS END=152690611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,111,1665:0,132,255:37,0 chr2 152690627 . T . PASS END=152690627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 152690695 . C . PASS END=152690695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 152690714 . C . PASS END=152690714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 152690788 . A . PASS END=152690788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 152691064 . T . PASS END=152691064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 152691298 . C . PASS END=152691298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 152691303 . A . PASS END=152691303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 152691479 . G . PASS END=152691479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr2 152691488 . A . PASS END=152691488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 152691502 . T . PASS END=152691502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1419:0,107,255:40,0 chr2 152691523 . T . PASS END=152691523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 152691552 . C . PASS END=152691552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 152691689 . T . PASS END=152691689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 152691799 . C . PASS END=152691799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,105,1575:0,132,255:35,0 chr2 152691804 . G . PASS END=152691804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr2 152691891 . G . PASS END=152691891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 152691945 . C . PASS END=152691945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 152691965 . A . PASS END=152691965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 152692158 . T . PASS END=152692158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 152692246 . G . PASS END=152692246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 152692333 . C . PASS END=152692333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 152692665 . G . PASS END=152692665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 152692709 . A . PASS END=152692709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,108,1620:0,131,255:35,0 chr2 152693091 . C . PASS END=152693091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 152693124 . C . PASS END=152693124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 152693322 . A . PASS END=152693322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 152693445 . A . PASS END=152693445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 152693463 . G . PASS END=152693463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 152693632 . G . PASS END=152693632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 152693681 . G . PASS END=152693681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 152693696 . A . PASS END=152693696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 152693702 . A . PASS END=152693702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 152693807 . T . PASS END=152693807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 152693822 . G . PASS END=152693822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 152693848 . C . PASS END=152693848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 152693998 . A . PASS END=152693998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 152694112 . T . PASS END=152694112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,105,1575:0,115,255:34,0 chr2 152694131 . G . LowGQ END=152694131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,7:45:0:45:0,0,1164:114,0,255:38,10 chr2 152694167 . A . PASS END=152694167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:99:53:0,120,1800:0,126,255:40,0 chr2 152694192 . G . PASS END=152694192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 152694375 . T . PASS END=152694375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 152694405 . G . PASS END=152694405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr2 152694445 . G . PASS END=152694445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 152694523 . G . PASS END=152694523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 152694718 . A . PASS END=152694718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 152694725 . G . PASS END=152694725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 152694838 . A . PASS END=152694838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 152694896 . G . PASS END=152694896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,111,1665:0,141,255:37,0 chr2 152695009 . T . PASS END=152695009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:65:46:0,65,1564:0,65,255:40,1 chr2 152695041 . A . PASS END=152695041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 152695089 . A . PASS END=152695089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 152695178 . G . LowGQ END=152695178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,15:69:0:69:0,0,1421:255,0,255:40,21 chr2 152695189 . T . PASS END=152695189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,202,255:40,0 chr2 152695268 . G . PASS END=152695268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,111,1665:0,113,255:36,0 chr2 152695481 . A . LowGQ END=152695481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,10:61:0:61:0,0,1537:152,0,255:40,14 chr2 152695633 . T . PASS END=152695893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:33:0,81,1215:0,99,255:40,0 chr2 152698233 . T . PASS END=152698253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,114,1626:0,114,255:40,0 chr2 152698417 . C . PASS END=152698581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:34:0,84,1164:0,85,255:40,0 chr2 152698582 . C . PASS END=152698594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:23:0,60,900:0,69,255:23,0 chr2 152698595 . A . PASS END=152698597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,662:0,49,255:19,0 chr2 152698598 . A . PASS END=152698598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 152698599 . T . PASS END=152698602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 152709962 . T . PASS END=152710078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,156,255:40,0 chr2 152711738 . C . PASS END=152711739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 152711740 . T . PASS END=152711744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:69:36:0,69,1167:0,69,255:33,0 chr2 152711745 . G . PASS END=152711889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:37:0,100,1344:0,100,255:40,0 chr2 152711894 . A . PASS END=152711894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 152711897 . G . PASS END=152711897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr2 152717225 . C . PASS END=152717334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,149,255:40,0 chr2 152725691 . C . PASS END=152725749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,181,255:40,0 chr2 152726160 . C . PASS END=152726164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 152726165 . T . PASS END=152726167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 152726168 . T . PASS END=152726168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 152726169 . G . PASS END=152726173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 152726174 . T . PASS END=152726174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:27,0 chr2 152726175 . T . PASS END=152726249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1117:0,80,255:35,0 chr2 152726718 . C . PASS END=152727195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:97:38:0,97,1376:0,97,255:40,0 chr2 152727356 . C . PASS END=152727416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:135,0:135:99:111:0,120,1800:0,247,255:40,0 chr2 152728931 . C . PASS END=152729007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:40:0,96,1440:0,113,255:40,0 chr2 152731434 . C . PASS END=152731484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,132,255:40,2 chr2 152732935 . C . PASS END=152732936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1443:0,117,255:39,0 chr2 152732940 . C . PASS END=152733068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:36:0,91,1179:0,91,255:40,0 chr2 152733069 . T . PASS END=152733069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1315:0,78,255:36,0 chr2 152733070 . T . PASS END=152733070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 152737314 . C . PASS END=152737319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1276:0,92,255:35,0 chr2 152737320 . A . PASS END=152737320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1207:0,77,255:34,0 chr2 152737321 . A . PASS END=152737436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:35:0,93,1244:0,93,255:40,0 chr2 152739765 . C . PASS END=152739884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1192:0,83,255:40,0 chr2 152743863 . C . PASS END=152743865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 152819359 . C . PASS END=152819425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,117,1800:0,117,255:40,0 chr2 152828059 . A . PASS END=152828064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:68:0,120,1800:0,177,255:40,0 chr2 152828143 . C . PASS END=152828214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:45:0,105,1575:0,135,255:40,0 chr2 152830183 . A . PASS END=152830227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,156,255:40,0 chr2 152954841 . T . PASS END=152954841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1504:0,120,255:40,0 chr2 152954844 . C . PASS END=152954927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,104,1415:0,104,255:40,0 chr2 152954931 . G . PASS END=152954931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 152955155 . C . PASS END=152955163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1388:0,101,255:38,0 chr2 152955167 . C . PASS END=152955167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 152955463 . C . PASS END=152955464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 152955465 . G . PASS END=152955465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 152955466 . C . PASS END=152955466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,753:0,39,255:21,0 chr2 152955467 . G . PASS END=152955469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 152955470 . G . PASS END=152955471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,779:0,58,255:23,0 chr2 152955472 . G . PASS END=152955477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr2 152955478 . G . PASS END=152955478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 152955479 . T . PASS END=152955479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:26,0 chr2 152955480 . G . PASS END=152955480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 152955481 . C . PASS END=152955481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 152955482 . G . PASS END=152955483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 152955484 . C . PASS END=152955484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 152955485 . C . PASS END=152955524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1094:0,83,255:32,0 chr2 152955525 . T . PASS END=152955525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 152955535 . C . PASS END=152955535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 152977088 . C . PASS END=152977099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,939:0,64,255:26,0 chr2 152977100 . C . PASS END=152977301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:27:0,80,956:0,80,255:40,0 chr2 152977302 . G . PASS END=152977316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:26:0,66,990:0,78,255:25,0 chr2 152980280 . C . PASS END=152980280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 152980281 . T . PASS END=152980281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,976:0,70,255:28,0 chr2 152980282 . T . PASS END=152980288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1003:0,87,255:29,0 chr2 152980289 . G . PASS END=152980289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 152980290 . A . PASS END=152980290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 152980291 . A . PASS END=152980291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 152980292 . G . PASS END=152980438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:31:0,87,1174:0,87,255:40,0 chr2 152980439 . A . PASS END=152980449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:36:0,60,900:0,92,255:24,0 chr2 152982740 . C . PASS END=152982741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 152982742 . G . PASS END=152982743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 152982744 . A . PASS END=152982744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr2 152982745 . T . PASS END=152982746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 152982747 . G . PASS END=152982747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 152982748 . G . PASS END=152982893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:84:29:0,84,1072:0,87,255:40,0 chr2 152988628 . C . PASS END=152988682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,2:110:99:97:0,120,1800:0,255,255:40,0 chr2 152989687 . C . PASS END=152989774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,108,1620:0,122,255:40,0 chr2 152989916 . C . PASS END=152989998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,166,255:40,0 chr2 152992023 . C . PASS END=152992117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:44:0,102,1530:0,125,255:40,0 chr2 153000341 . C . PASS END=153000341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 153000342 . T . PASS END=153000374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:29:0,86,1064:0,86,255:40,0 chr2 153000375 . T . PASS END=153000527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:40:0,102,1530:0,103,255:40,0 chr2 153001402 . C . PASS END=153001471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,161,255:40,0 chr2 153003676 . C . PASS END=153003805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:41:0,105,1458:0,107,255:40,0 chr2 153003806 . C . PASS END=153003814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:42:40:0,42,630:0,107,255:15,0 chr2 153003815 . G . PASS END=153003822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:33:15:0,33,495:0,45,255:13,0 chr2 153004538 . C . PASS END=153004636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:55:0,120,1800:0,149,255:40,0 chr2 153004739 . A . PASS END=153004814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:60:0,114,1710:0,142,255:40,0 chr2 153006659 . C . PASS END=153006743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:72:0,120,1800:0,216,255:40,0 chr2 153032117 . C . PASS END=153032128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1260:0,89,255:35,0 chr2 153032129 . C . PASS END=153032129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1255:0,75,255:33,0 chr2 153032130 . G . PASS END=153032131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:34,0 chr2 153032132 . A . PASS END=153032132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:34,0 chr2 153032133 . G . PASS END=153032156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1288:0,99,255:35,0 chr2 153192118 . A . PASS END=153192123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:16,0 chr2 153192124 . A . PASS END=153192124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 153192125 . A . PASS END=153192131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,627:0,51,255:18,0 chr2 153192132 . G . PASS END=153192143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr2 153192144 . G . PASS END=153192144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 153192145 . C . PASS END=153192151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 153192152 . C . PASS END=153192152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 153192153 . C . PASS END=153192155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,907:0,72,255:25,0 chr2 153192156 . T . PASS END=153192156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 153192157 . T . PASS END=153192163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 153192164 . C . PASS END=153192167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,820:0,42,255:23,0 chr2 153192168 . C . PASS END=153192168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 153192169 . A . PASS END=153192170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 153192171 . C . PASS END=153192207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,884:0,61,255:25,0 chr2 153192208 . C . PASS END=153192208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 153192209 . T . PASS END=153192209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 153192210 . G . PASS END=153192210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 153192211 . G . PASS END=153192213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 153192214 . G . PASS END=153192214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 153192215 . A . PASS END=153192217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 153192218 . G . PASS END=153192219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 153192220 . T . PASS END=153192220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 153192221 . T . PASS END=153192234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,46,255:19,0 chr2 153378457 . A . PASS END=153378458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 153378459 . T C, 49.14 PASS DP=40;MQ=250.00;MQRankSum=5.369;ReadPosRankSum=2.107;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,18,0:0.450,0.000:40:6,9,0:16,9,0:48:84,0,50,644,787,1430:255,0,255:22,0:4.9135e+01,7.4811e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,10,8:11,11,11,7 chr2 153378460 . G . PASS END=153378496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,100,1674:0,100,255:40,0 chr2 153378497 . G . PASS END=153378536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,134,255:40,0 chr2 153378537 . T . PASS END=153378540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,155,255:40,0 chr2 153399253 . G . PASS END=153399333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,112,1768:0,112,255:40,0 chr2 153405535 . A . PASS END=153405556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,180,255:40,0 chr2 153405557 . A . PASS END=153405593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,215,255:40,0 chr2 153405594 . G A, 45.17 PASS DP=81;MQ=250.00;MQRankSum=7.526;ReadPosRankSum=2.065;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,31,0:0.383,0.000:81:22,16,0:28,15,0:45:80,0,50,1098,1780,2878:255,0,255:40,0:4.5175e+01,1.5377e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,28,10,21:28,22,15,16 chr2 153405595 . A . PASS END=153405611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,212,255:40,0 chr2 153415254 . A . PASS END=153415287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,3:65:99:64:0,120,1800:0,134,255:40,0 chr2 153415288 . G . PASS END=153415337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:43:0,108,1620:0,112,255:40,0 chr2 153417397 . T . PASS END=153417403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,970:0,78,255:26,0 chr2 153417404 . T . PASS END=153417411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:27,0 chr2 153417412 . T . PASS END=153417412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 153417413 . G . PASS END=153417416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 153417417 . A . PASS END=153417419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 153417420 . G . PASS END=153417427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1161:0,80,255:29,0 chr2 153417428 . G . PASS END=153417428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:18:32:0,18,980:0,18,255:27,0 chr2 153417429 . A . PASS END=153417431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 153417432 . G . PASS END=153417432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,984:0,38,255:28,0 chr2 153417433 . C . PASS END=153417433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 153417434 . T . PASS END=153417438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 153417439 . G . PASS END=153417439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr2 153417440 . G . PASS END=153417440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 153417441 . A . PASS END=153417441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1092:0,63,255:28,0 chr2 153417442 . C . PASS END=153417442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 153417443 . A . PASS END=153417444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:32:0,63,1084:0,63,255:31,0 chr2 153417445 . A . PASS END=153417445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1139:0,55,255:30,0 chr2 153417446 . T . PASS END=153417446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:24:34:0,24,1086:0,24,255:30,0 chr2 153417447 . C . PASS END=153417447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:31,0 chr2 153417448 . A . PASS END=153417449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1134:0,85,255:33,0 chr2 153417450 . A . PASS END=153417450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1169:0,47,255:29,0 chr2 153417451 . G . PASS END=153417453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:29,0 chr2 153417454 . C . PASS END=153417455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1111:0,33,255:29,0 chr2 153417456 . G . PASS END=153417456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:59:36:0,59,1214:0,59,255:29,0 chr2 153417457 . G . PASS END=153417465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1280:0,81,255:35,0 chr2 153417466 . C . PASS END=153417467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:32,0 chr2 153417468 . T . PASS END=153417475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1247:0,89,255:33,0 chr2 153417476 . C . PASS END=153417476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:29,0 chr2 153417477 . T . PASS END=153417478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:31,0 chr2 153417479 . C . PASS END=153417479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:30,0 chr2 153417480 . A . PASS END=153417489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1172:0,80,255:31,0 chr2 153417490 . C . PASS END=153417490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:30,0 chr2 153417491 . A . PASS END=153417498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1233:0,86,255:31,0 chr2 153417499 . C . PASS END=153417499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:30,0 chr2 153417500 . T . PASS END=153417502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1233:0,86,255:31,0 chr2 153417503 . C . PASS END=153417504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:31,0 chr2 153417505 . T . PASS END=153417516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1140:0,82,255:29,0 chr2 153417517 . T . PASS END=153417517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 153417518 . G . PASS END=153417518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 153417519 . T . PASS END=153417519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:27,0 chr2 153417520 . C . PASS END=153417520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 153417521 . T . PASS END=153417521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:26,0 chr2 153417522 . C . PASS END=153417530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:28,0 chr2 153417531 . G . PASS END=153417531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,984:0,53,255:27,0 chr2 153417532 . A . PASS END=153417535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 153417536 . C . PASS END=153417549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr2 153431650 . A . PASS END=153431758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:67:0,120,1800:0,177,255:40,0 chr2 153435402 . T . PASS END=153435433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:35:0,95,1333:0,95,255:40,0 chr2 153435434 . C T, 49.62 PASS DP=49;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=1.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,23,0:0.469,0.000:49:17,12,0:9,11,0:48:84,0,50,794,929,1722:255,0,255:24,0:4.9623e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,10,11,12:13,13,12,11 chr2 153435435 . G . PASS END=153435471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,111,1762:0,111,255:40,0 chr2 153435472 . A . PASS END=153435478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,131,255:40,0 chr2 153437470 . A . PASS END=153437563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:41:0,93,1499:0,93,255:40,0 chr2 153463853 . G . PASS END=153463927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:73:0,120,1800:0,146,255:40,0 chr2 153468009 . G . PASS END=153468119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:36:0,108,1357:0,108,255:40,0 chr2 153471365 . A . PASS END=153471514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:31:0,82,1149:0,82,255:40,0 chr2 153473605 . T . PASS END=153473706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,135,255:40,0 chr2 153475360 . G . PASS END=153475509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,120,1800:0,130,255:40,1 chr2 153475510 . G . PASS END=153475510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:75:63:0,75,1834:0,75,255:40,0 chr2 153475511 . G . PASS END=153475514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,142,255:40,0 chr2 153475515 . T . PASS END=153475515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,7:63:36:63:0,36,1621:0,36,255:40,0 chr2 153475516 . A . PASS END=153475612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,83,255:40,0 chr2 153475613 . C . PASS END=153475636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:25,0 chr2 153475637 . C . PASS END=153475652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,698:0,44,255:19,0 chr2 153475653 . A . PASS END=153475653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:16,0 chr2 153475654 . T . PASS END=153475656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:18,0 chr2 153475657 . G . PASS END=153475658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:16,0 chr2 153475659 . C . PASS END=153475667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 153475668 . A . PASS END=153475670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 153475671 . A . PASS END=153475672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:18,0 chr2 153476023 . T . PASS END=153476027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,402:0,22,255:9,0 chr2 153476028 . A . PASS END=153476028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,389:0,11,255:8,0 chr2 153476029 . A . PASS END=153476035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:25:14:0,25,405:0,25,255:9,0 chr2 153476036 . A . PASS END=153476036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,474:0,9,255:8,0 chr2 153476037 . G . PASS END=153476037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:27:17:0,27,405:0,34,255:8,0 chr2 153476038 . T . PASS END=153476038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,521:0,12,255:8,0 chr2 153476039 . A . PASS END=153476039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,541:0,7,255:8,0 chr2 153476040 . A . PASS END=153476040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:27:18:0,27,405:0,37,255:8,0 chr2 153476041 . C . PASS END=153476041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:8,0 chr2 153476042 . A . LowGQ END=153476042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,443:7,0,255:7,0 chr2 153476043 . C . PASS END=153476043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,576:0,18,255:8,0 chr2 153476044 . C . PASS END=153476044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,537:0,2,255:7,0 chr2 153476045 . A . PASS END=153476045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,611:0,16,255:6,0 chr2 153476046 . C . PASS END=153476046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:24:22:0,24,360:0,33,255:7,0 chr2 153476047 . C . PASS END=153476050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:12:22:0,12,180:0,27,255:6,0 chr2 153476051 . G . PASS END=153476065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:3:21:0,3,45:0,19,255:3,1 chr2 153476066 . G GCCA, 99.04 PASS DP=19;MQ=241.15;MQRankSum=1.349;ReadPosRankSum=-0.385;FractionInformativeReads=0.947;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,17,0:0.944,0.000:18:1,9,0:0,8,0:50:132,53,0,232,232,232:255,0,56:1,21:9.9045e+01,4.9997e+01,4.3489e-05,2.3381e+02,2.6381e+02,2.3682e+02:0.00,30.00,33.01,34.77,64.77,37.78:1,0,0,17:1,0,8,9 chr2 153476067 . C . LowGQ END=153476067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,14:21:0:21:0,0,0:255,0,164:17,0 chr2 153476068 . C . PASS END=153476071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,623:0,46,255:17,0 chr2 153476072 . T . LowGQ END=153476072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,451:92,0,255:16,0 chr2 153476073 . C . PASS END=153476073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 153476074 . C . PASS END=153476074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:15,0 chr2 153476075 . T . PASS END=153476075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,566:0,13,255:15,0 chr2 153476076 . C . PASS END=153476077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,690:0,46,255:16,0 chr2 153476078 . A . LowGQ END=153476078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,526:3,0,255:16,0 chr2 153476079 . C . PASS END=153476079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,665:0,30,255:16,0 chr2 153476080 . C . PASS END=153476080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 153476081 . T . LowGQ END=153476081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,508:20,0,255:14,0 chr2 153476082 . C . PASS END=153476083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:16,0 chr2 153476084 . T . LowGQ END=153476084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,524:17,0,255:16,0 chr2 153476085 . C . PASS END=153476085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:16,0 chr2 153476086 . C . PASS END=153476086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 153476087 . T . LowGQ END=153476087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,5:22:0:22:0,0,488:31,0,255:15,0 chr2 153476088 . C . PASS END=153476088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,712:0,19,255:16,0 chr2 153476089 . C . PASS END=153476089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 153476090 . C . PASS END=153476090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,698:0,19,255:17,0 chr2 153476091 . C . PASS END=153476091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:18,0 chr2 153476092 . C . PASS END=153476092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr2 153476093 . A . LowGQ END=153476093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,6:24:0:24:0,0,488:86,0,255:18,0 chr2 153476094 . C . PASS END=153476095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,837:0,41,255:19,0 chr2 153476096 . G . LowGQ END=153476096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:0:24:0,0,601:44,0,255:19,0 chr2 153476097 . C . PASS END=153476101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 153476102 . T . LowGQ END=153476102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,5:25:0:25:0,0,604:52,0,255:19,0 chr2 153476103 . C . PASS END=153476104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:21,0 chr2 153476105 . G . LowGQ END=153476105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,704:10,0,255:20,0 chr2 153476106 . C . PASS END=153476107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 153476108 . T . PASS END=153476108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,743:0,3,255:21,0 chr2 153476109 . C . PASS END=153476109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:23,0 chr2 153476110 . C . PASS END=153476110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 153476111 . T . PASS END=153476111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,880:0,42,255:25,0 chr2 153476112 . C . PASS END=153476113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 153476114 . T . PASS END=153476114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,798:0,31,255:24,0 chr2 153476115 . C . PASS END=153476115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 153476116 . T . PASS END=153476116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,867:0,24,255:26,0 chr2 153476117 . C . PASS END=153476119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 153476120 . A . PASS END=153476120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:20:30:0,20,949:0,20,255:28,0 chr2 153476121 . G . PASS END=153476122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:30,0 chr2 153476123 . C . PASS END=153476125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1155:0,80,255:33,0 chr2 153476126 . T . PASS END=153476126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:31,0 chr2 153476127 . G . PASS END=153476131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1202:0,86,255:36,0 chr2 153476132 . T . PASS END=153476133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1203:0,72,255:34,0 chr2 153476134 . A . PASS END=153476138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1319:0,95,255:33,0 chr2 153476139 . G . PASS END=153476139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1249:0,50,255:30,0 chr2 153476140 . T . PASS END=153476140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1291:0,65,255:31,0 chr2 153476141 . A . PASS END=153476143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:38:0,81,1280:0,81,255:32,0 chr2 153476144 . A . PASS END=153476144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1230:0,47,255:31,0 chr2 153476145 . G . PASS END=153476146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1310:0,81,255:35,0 chr2 153476147 . T . PASS END=153476147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1246:0,62,255:32,0 chr2 153476148 . C . PASS END=153476153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1363:0,81,255:38,0 chr2 153476154 . T . PASS END=153476154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1294:0,67,255:36,0 chr2 153476155 . T . PASS END=153476155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1204:0,50,255:35,0 chr2 153476156 . A . PASS END=153476157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:61:37:0,61,1214:0,61,255:35,0 chr2 153476158 . C . PASS END=153476158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 153476159 . A . PASS END=153476159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 153476160 . C . PASS END=153476161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1343:0,97,255:35,0 chr2 153476162 . T . PASS END=153476162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1277:0,65,255:34,0 chr2 153476163 . C . PASS END=153476176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1296:0,81,255:36,0 chr2 153476177 . A . PASS END=153476177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:32,0 chr2 153476178 . C . PASS END=153476179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 153476180 . T . PASS END=153476180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:32,0 chr2 153476181 . C . PASS END=153476186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1263:0,86,255:32,0 chr2 153476187 . C . PASS END=153476187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:31,0 chr2 153476188 . C . PASS END=153476197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 153476198 . T . PASS END=153476198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 153476199 . T . PASS END=153476199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 153476200 . C . PASS END=153476200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr2 153476201 . A . PASS END=153476204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 153476205 . A . PASS END=153476205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 153476206 . C . PASS END=153476210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr2 153476211 . G . PASS END=153476211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr2 153476212 . T . PASS END=153476219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 153476220 . T . PASS END=153476221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 153476222 . A . PASS END=153476222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,921:0,42,255:24,0 chr2 153476223 . G . PASS END=153476232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr2 153479051 . A . PASS END=153479071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:87:0,120,1800:0,245,255:40,0 chr2 153481952 . C . PASS END=153481980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,112,1800:0,112,255:40,0 chr2 153481981 . A . PASS END=153482076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,155,255:40,0 chr2 153483039 . G . PASS END=153483241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:46:0,120,1800:0,123,255:40,0 chr2 153484813 . A . PASS END=153484814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 153484815 . T . PASS END=153484815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:27,0 chr2 153484816 . T . PASS END=153484829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,993:0,87,255:29,0 chr2 153484830 . T . PASS END=153484830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 153484831 . G . PASS END=153485047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:33:0,80,1249:0,80,255:40,0 chr2 153486170 . C . PASS END=153486238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:91:42:0,91,1535:0,91,255:40,0 chr2 153486339 . A . PASS END=153486419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:51:0,120,1800:0,123,255:40,0 chr2 153488522 . C . PASS END=153488651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:42:0,104,1780:0,104,255:40,1 chr2 153492941 . T . PASS END=153492943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 153492944 . C . PASS END=153492945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 153492946 . C . PASS END=153492947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 153492948 . T . PASS END=153492951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:30,0 chr2 153492952 . A . PASS END=153492952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,976:0,60,255:29,0 chr2 153492953 . A . PASS END=153492954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 153492955 . G . PASS END=153492955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 153492956 . T . PASS END=153493104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:31:0,86,1111:0,86,255:40,0 chr2 153494087 . G . PASS END=153494188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:67:0,120,1800:0,173,255:40,0 chr2 153496472 . C . PASS END=153496570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:39:0,89,1496:0,89,255:40,0 chr2 153497305 . T . PASS END=153497428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:58:0,120,1800:0,175,255:40,0 chr2 153499933 . T . PASS END=153500024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,111,1665:0,119,255:40,0 chr2 153501948 . C . PASS END=153501955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:31,0 chr2 153501956 . A . PASS END=153501956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr2 153501957 . A . PASS END=153502030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,90,255:40,0 chr2 153502031 . A . PASS END=153502031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1247:0,64,255:27,0 chr2 153502032 . C . PASS END=153502032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr2 153502033 . A . PASS END=153502041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr2 153504310 . A . PASS END=153504419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:39:0,93,1390:0,101,255:40,0 chr2 153512820 . T . PASS END=153512912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:61:0,120,1800:0,165,255:40,1 chr2 153513638 . T . PASS END=153513655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:78:0,120,1800:0,179,255:40,0 chr2 153514403 . A . PASS END=153514534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:60:0,120,1800:0,171,255:40,0 chr2 153515462 . A . PASS END=153515523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:70:0,120,1800:0,171,255:40,1 chr2 153515607 . C . PASS END=153515642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,87,255:38,0 chr2 153515643 . G . PASS END=153515643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr2 153515644 . A . PASS END=153515703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1175:0,86,255:34,0 chr2 153515784 . C . PASS END=153515790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1437:0,96,255:40,0 chr2 153515791 . G . PASS END=153515791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:43:44:0,43,1297:0,43,255:38,0 chr2 153515792 . A . PASS END=153515870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:43:0,114,1469:0,114,255:40,0 chr2 153519117 . C . PASS END=153519212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,150,255:40,0 chr2 153519549 . A . PASS END=153519561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,113,1535:0,113,255:40,0 chr2 153519562 . G . PASS END=153519686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:55:0,120,1800:0,148,255:40,0 chr2 153520169 . A . PASS END=153520285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,1:105:99:71:0,120,1800:0,197,255:40,0 chr2 153520390 . C . PASS END=153520493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:75:0,120,1800:0,197,255:40,0 chr2 153520652 . C . PASS END=153520744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,150,255:40,0 chr2 153520745 . C . PASS END=153520766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,109,1412:0,109,255:40,0 chr2 153525651 . C . PASS END=153525784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:43:0,93,1395:0,112,255:40,0 chr2 153526745 . T . PASS END=153526895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:40:0,117,1506:0,118,255:40,0 chr2 153527787 . C . PASS END=153527895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,108,1620:0,146,255:40,0 chr2 153528973 . T . PASS END=153529137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:60:0,120,1800:0,170,255:40,0 chr2 153529492 . C . PASS END=153529556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:74:0,120,1800:0,223,255:40,0 chr2 153530112 . C . PASS END=153530220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,142,255:40,0 chr2 153532919 . T . PASS END=153532919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 153532920 . C . PASS END=153533160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:27:0,81,1039:0,81,255:40,0 chr2 153533161 . T . PASS END=153533161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1422:0,77,255:38,0 chr2 153533162 . G . PASS END=153533279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1194:0,81,255:40,0 chr2 153533280 . A . PASS END=153533293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,890:0,73,255:25,0 chr2 153533965 . C . PASS END=153533989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:78:0,120,1800:0,218,255:40,0 chr2 153535570 . C . PASS END=153535623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:61:0,120,1800:0,170,255:40,0 chr2 153535866 . C . PASS END=153535986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:89:35:0,89,1294:0,89,255:40,0 chr2 153537740 . C . PASS END=153537850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:57:0,120,1800:0,157,255:40,0 chr2 153547476 . T . PASS END=153547492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:122,0:122:99:112:0,120,1800:0,255,255:40,0 chr2 153549552 . C . PASS END=153549582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:93:0,120,1800:0,255,255:40,0 chr2 153549982 . T . PASS END=153549990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr2 153551056 . C . PASS END=153551136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:41:0,107,1467:0,107,255:40,0 chr2 153571064 . C . PASS END=153571111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:71:0,120,1800:0,196,255:40,0 chr2 153572509 . T . PASS END=153572514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1286:0,89,255:33,0 chr2 153572515 . C . PASS END=153572515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1151:0,63,255:32,0 chr2 153572516 . A . PASS END=153572525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1225:0,99,255:33,0 chr2 153572526 . C . PASS END=153572526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:35,0 chr2 153572527 . T . PASS END=153572617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:37:0,87,1305:0,98,255:40,0 chr2 153572618 . T . PASS END=153572640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,847:0,69,255:26,0 chr2 153573744 . C . PASS END=153573758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr2 153573759 . C . PASS END=153573759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:21,0 chr2 153573760 . A . PASS END=153573760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 153573761 . G . PASS END=153573761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 153573762 . G . PASS END=153573764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 153573765 . G . PASS END=153573765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 153573766 . C . PASS END=153573766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,767:0,35,255:21,0 chr2 153573767 . C . PASS END=153573770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:23,0 chr2 153573771 . A . PASS END=153573771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 153573772 . G . PASS END=153573780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,838:0,69,255:24,0 chr2 153573781 . C . PASS END=153573781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr2 153573782 . A . PASS END=153573782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 153573783 . A . PASS END=153573786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 153573787 . C . PASS END=153573787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 153573788 . C . PASS END=153573807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,886:0,71,255:26,0 chr2 153573808 . G . PASS END=153573824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr2 153573825 . G . PASS END=153573826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:23,0 chr2 153573827 . C . PASS END=153573827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:22,0 chr2 153573828 . C . PASS END=153573867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,831:0,69,255:24,0 chr2 153573868 . A . PASS END=153573868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 153573869 . C . PASS END=153573872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 153573873 . G . PASS END=153573904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,53,255:19,0 chr2 153573905 . T . PASS END=153573905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 153573906 . C . PASS END=153573931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,545:0,40,255:18,0 chr2 153573932 . G . PASS END=153573932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 153573933 . G . PASS END=153573947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr2 153573948 . A . PASS END=153573948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,596:0,15,255:12,0 chr2 153573949 . C . PASS END=153573950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 153573951 . C . PASS END=153573951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 153573952 . A . PASS END=153573952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:13,0 chr2 153573953 . T . PASS END=153573954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:14,0 chr2 153573955 . C . PASS END=153573957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 153573958 . A . PASS END=153573958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,459:0,6,255:12,0 chr2 153573959 . C . PASS END=153573959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 153573960 . A . PASS END=153573960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,437:0,6,255:12,0 chr2 153573961 . A . PASS END=153573968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 153573969 . T . LowGQ END=153573969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,325:16,0,255:10,0 chr2 153573970 . C . PASS END=153573970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 153573971 . T . PASS END=153573974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 153573975 . T . LowGQ END=153573975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,371:16,0,255:10,0 chr2 153573976 . G . PASS END=153573986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 153573987 . A . LowGQ END=153573987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr2 153573988 . C . PASS END=153573994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,459:0,39,255:13,0 chr2 153573995 . T . LowGQ END=153573995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:10,0 chr2 153573996 . A . PASS END=153574003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 153574004 . A . PASS END=153574004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:10,0 chr2 153574005 . A . PASS END=153574006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 153574007 . G . PASS END=153574022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:11,0 chr2 153574023 . G . PASS END=153574027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 153574028 . G . PASS END=153574035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 153574036 . G . PASS END=153574036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:10,0 chr2 153574037 . G . PASS END=153574044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr2 153574045 . A . LowGQ END=153574046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:12:0,0,332:16,0,255:10,0 chr2 153574047 . G . PASS END=153574047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 153574048 . C . PASS END=153574048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,351:0,5,255:11,0 chr2 153574049 . T . PASS END=153574049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 153574050 . G . PASS END=153574050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr2 153574051 . A . PASS END=153574052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:9,0 chr2 153574053 . G . PASS END=153574053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 153574054 . G . PASS END=153574055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:8,0 chr2 153574056 . C . PASS END=153574056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 153574057 . T . LowGQ END=153574057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:9,0 chr2 153574058 . T . PASS END=153574058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 153574059 . C . PASS END=153574059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 153574060 . C . PASS END=153574061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,337:0,22,255:9,0 chr2 153574062 . C . PASS END=153574063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,349:0,6,255:9,0 chr2 153574064 . C . PASS END=153574064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 153574065 . T . PASS END=153574065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 153574066 . G . LowGQ END=153574067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,317:0,0,255:10,0 chr2 153574068 . C . PASS END=153574068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr2 153574069 . C . LowGQ END=153574070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,311:0,0,255:10,0 chr2 153574071 . A . PASS END=153574071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 153574072 . T . PASS END=153574073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 153574074 . A . PASS END=153574074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 153574075 . G . PASS END=153574075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 153574076 . A . LowGQ END=153574080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,263:0,0,255:10,0 chr2 153574081 . G . PASS END=153574081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,337:0,33,255:11,0 chr2 153574082 . C . PASS END=153574082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 153574083 . C . PASS END=153574084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 153574085 . C . LowGQ END=153574085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:9,0 chr2 153574086 . C . PASS END=153574086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 153574087 . G . PASS END=153574087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 153574088 . A . LowGQ END=153574088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,269:36,0,255:9,0 chr2 153574089 . C . PASS END=153574089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 153574090 . A . PASS END=153574090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,286:0,3,255:9,0 chr2 153574091 . C . PASS END=153574092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,327:0,19,255:10,0 chr2 153574093 . C . LowGQ END=153574094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,294:8,0,255:9,0 chr2 153574095 . G . PASS END=153574095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 153574096 . C . LowGQ END=153574099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,263:25,0,255:10,0 chr2 153574100 . G . PASS END=153574100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 153574101 . C . LowGQ END=153574101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,290:9,0,255:11,0 chr2 153574102 . G . PASS END=153574102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 153574103 . G . LowGQ END=153574108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,216:11,0,255:10,0 chr2 153574109 . C . PASS END=153574109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 153574110 . G . LowGQ END=153574110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,3:13:0:13:0,0,182:78,0,255:7,0 chr2 153574111 . C . PASS END=153574111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 153574112 . C . LowGQ END=153574112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,382:0,0,255:9,0 chr2 153574113 . C . PASS END=153574113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 153574114 . C . LowGQ END=153574131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,3:11:0:8:0,0,47:0,0,95:6,0 chr2 153574132 . G . PASS END=153574132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 153574133 . G . LowGQ END=153574145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,1:8:0:7:0,0,0:0,0,35:5,1 chr2 153575139 . A . PASS END=153575140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 153575141 . G . PASS END=153575141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 153575142 . T . PASS END=153575143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr2 153575144 . G . PASS END=153575144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 153575145 . T . PASS END=153575151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,623:0,41,255:19,0 chr2 153575152 . A . PASS END=153575172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:22,0 chr2 153575173 . T . PASS END=153575173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 153575174 . G . PASS END=153575181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr2 153575182 . G . PASS END=153575182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:20,0 chr2 153575183 . C . PASS END=153575192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,717:0,66,255:24,0 chr2 153575193 . A . PASS END=153575193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 153575194 . C . PASS END=153575199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 153575200 . G . PASS END=153575205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 153575206 . T . PASS END=153575207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 153575208 . G . PASS END=153575212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 153575213 . G . PASS END=153575232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 153575233 . C . PASS END=153575233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 153575234 . T . PASS END=153575236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 153575237 . G . PASS END=153575241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr2 153575242 . A . PASS END=153575242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:29,0 chr2 153575243 . C . PASS END=153575259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:31,0 chr2 153575260 . A . PASS END=153575260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:25,0 chr2 153575261 . A . PASS END=153575261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,995:0,51,255:25,0 chr2 153575262 . G . PASS END=153575262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 153575263 . T . PASS END=153575263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr2 153575264 . C . PASS END=153575274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:27,0 chr2 153575275 . A . PASS END=153575276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 153575277 . G . PASS END=153575278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 153575279 . A . PASS END=153575279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 153575280 . T . PASS END=153575281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 153575282 . C . PASS END=153575305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,68,255:25,0 chr2 153575306 . G . PASS END=153575306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 153575307 . G . PASS END=153575318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,909:0,75,255:26,0 chr2 153575319 . G . PASS END=153575321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:27,0 chr2 153575322 . G . PASS END=153575336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,856:0,61,255:25,0 chr2 153575337 . C . PASS END=153575338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 153575339 . C . PASS END=153575351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 153575352 . G . PASS END=153575356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 153575357 . C . PASS END=153575363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr2 153575364 . G . PASS END=153575365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 153575366 . C . PASS END=153575390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:25,0 chr2 153575391 . G . PASS END=153575391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 153575392 . A . PASS END=153575393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 153575394 . A . PASS END=153575394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 153575395 . A . PASS END=153575400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:24,0 chr2 153575401 . A . PASS END=153575401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,765:0,25,255:21,0 chr2 153575402 . T . PASS END=153575405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 153575406 . A . PASS END=153575408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 153575409 . T . PASS END=153575466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 153575467 . C . PASS END=153575467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:22,0 chr2 153575468 . T . PASS END=153575475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 153575476 . G . PASS END=153575476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 153575477 . C . PASS END=153575490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:26,0 chr2 153575491 . C . PASS END=153575503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 153575504 . C . PASS END=153575512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 153575513 . C . PASS END=153575518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 153575519 . C . PASS END=153575520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 153575521 . C . PASS END=153575527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 153575528 . G . PASS END=153575538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,71,255:27,0 chr2 153575899 . A . PASS END=153575922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,120,1800:0,132,255:40,0 chr2 153575923 . A . PASS END=153575961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:54:0,116,1800:0,116,255:40,0 chr2 153575962 . T C, 49.66 PASS DP=55;MQ=250.00;MQRankSum=6.280;ReadPosRankSum=1.058;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,25,0:0.463,0.000:54:11,15,0:18,10,0:48:84,0,50,886,942,1829:255,0,255:25,0:4.9663e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,10,15:12,17,10,15 chr2 153575963 . T . PASS END=153575971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,143,255:40,0 chr2 153575972 . A G, 49.96 PASS DP=51;MQ=250.00;MQRankSum=6.114;ReadPosRankSum=-1.102;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,25,0:0.490,0.000:51:15,10,0:11,15,0:48:85,0,50,878,930,1808:255,0,255:25,0:4.9962e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,12,12,13:13,13,11,14 chr2 153575973 . A . PASS END=153575997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,102,1530:0,118,255:40,0 chr2 153575998 . T . PASS END=153575998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1244:0,76,255:35,0 chr2 153575999 . C . PASS END=153576005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,109,255:36,0 chr2 153576006 . T C, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.464;ReadPosRankSum=1.787;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,21,0:0.512,0.000:41:13,7,0:7,14,0:47:85,0,47,185,185,185:255,0,255:16,0:5.0000e+01,8.7495e-05,4.9927e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:11,9,9,12:8,12,11,10 chr2 153576007 . A . PASS END=153576010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:35,0 chr2 153576412 . C . PASS END=153576459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1155:0,80,255:40,0 chr2 153576460 . G . PASS END=153576460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:28,0 chr2 153576461 . A . PASS END=153576461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 153577047 . A . PASS END=153577050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,184,255:40,0 chr2 153577051 . G . PASS END=153577100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:47:0,99,1485:0,124,255:40,0 chr2 153589045 . G . PASS END=153589085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,194,255:40,0 chr2 153591508 . G . PASS END=153591640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:44:0,111,1665:0,125,255:40,0 chr2 153616261 . G . PASS END=153616354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:84:43:0,84,1260:0,112,255:40,0 chr2 154334750 . T . PASS END=154334754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,814:0,63,255:25,0 chr2 154334755 . A . PASS END=154334755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 154334756 . G . PASS END=154334758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 154334759 . C . PASS END=154334797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1047:0,81,255:32,0 chr2 154334798 . G . PASS END=154334798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr2 154334799 . T . PASS END=154334807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1172:0,93,255:31,0 chr2 154334808 . A . PASS END=154334808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 154334809 . G . PASS END=154334818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 154334819 . C . PASS END=154334819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:27,0 chr2 154334820 . A . PASS END=154334835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1125:0,90,255:31,0 chr2 154334836 . T . PASS END=154334836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 154334837 . G . PASS END=154334838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 154334839 . G . PASS END=154334839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 154334840 . C . PASS END=154334840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 154334841 . A . PASS END=154334841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 154334842 . G . PASS END=154334863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1125:0,80,255:31,0 chr2 154334864 . G . PASS END=154334864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 154334865 . C . PASS END=154334870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 154334871 . A . PASS END=154334871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 154334872 . C . PASS END=154334872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 154334873 . C . PASS END=154334915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 154334916 . C . PASS END=154334923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:42:23:0,42,806:0,42,255:22,0 chr2 154334924 . G . PASS END=154334924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 154334925 . T . PASS END=154334925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:20,0 chr2 154334926 . A . PASS END=154334926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:20,0 chr2 154334927 . C . PASS END=154334939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:45:18:0,45,675:0,50,255:18,0 chr2 154334940 . T . PASS END=154334940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 154334941 . C . PASS END=154334941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 154334942 . C . PASS END=154334942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 154334943 . G . PASS END=154334958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,596:0,48,255:16,0 chr2 154334959 . A . PASS END=154334959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr2 154334960 . G . PASS END=154334970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,576:0,48,255:16,0 chr2 154334971 . T . PASS END=154334971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 154334972 . C . PASS END=154334972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 154334973 . A . PASS END=154334973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 154334974 . C . PASS END=154334978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 154334979 . G . PASS END=154334987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 154334988 . G . PASS END=154334991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 154334992 . A . PASS END=154334992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 154334993 . G . PASS END=154334993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 154334994 . C . PASS END=154334994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:14,0 chr2 154334995 . A . PASS END=154334995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 154334996 . G . PASS END=154335004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 154335005 . T . PASS END=154335024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 154335025 . T . PASS END=154335025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 154335026 . G . PASS END=154335030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 154335031 . C . PASS END=154335031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 154335032 . C . PASS END=154335035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 154335036 . A . PASS END=154335036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 154335037 . A . PASS END=154335038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 154335039 . A . PASS END=154335039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 154335040 . G . PASS END=154335040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 154335041 . G . PASS END=154335041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 154335042 . C . PASS END=154335044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 154335045 . G . PASS END=154335045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 154335046 . C . PASS END=154335046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 154335047 . C . LowGQ END=154335048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,393:0,0,255:12,0 chr2 154335049 . C . PASS END=154335052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 154335053 . C . PASS END=154335053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 154335054 . G . PASS END=154335057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 154335058 . G . PASS END=154335058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:11,0 chr2 154335059 . G . PASS END=154335059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 154335060 . T . LowGQ END=154335060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr2 154335061 . T . PASS END=154335062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 154335063 . C . PASS END=154335063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 154335064 . C . PASS END=154335064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr2 154335065 . T . LowGQ END=154335065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:19,0,255:7,0 chr2 154335066 . A . PASS END=154335069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:11:0,21,315:0,33,255:8,1 chr2 154335070 . C . LowGQ END=154335071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,328:0,0,255:7,1 chr2 154335072 . G . PASS END=154335072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 154335073 . G . PASS END=154335074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,327:0,2,255:7,1 chr2 154335075 . T . PASS END=154335075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 154335076 . T . LowGQ END=154335076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,247:3,0,250:7,0 chr2 154335077 . C . PASS END=154335078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 154335079 . T . PASS END=154335079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 154801011 . A . PASS END=154801018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1391:0,117,255:40,0 chr2 154801019 . A . PASS END=154801019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1380:0,68,255:39,0 chr2 154801020 . T . PASS END=154801152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,113,1566:0,113,255:40,0 chr2 154996850 . C . PASS END=154997018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:45:0,120,1800:0,130,255:40,0 chr2 155092559 . C . PASS END=155092562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,121,255:40,0 chr2 155098543 . A . PASS END=155098699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:94:33:0,94,1177:0,94,255:40,0 chr2 155098700 . A . PASS END=155098700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 155098701 . G . PASS END=155098706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:32,0 chr2 155098707 . G . PASS END=155098709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 155099211 . A . PASS END=155099418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:29:0,81,1215:0,87,255:40,0 chr2 155102325 . G . PASS END=155102495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:45:0,114,1538:0,114,255:40,0 chr2 155115534 . G . PASS END=155115534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 155115535 . A . PASS END=155115536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:68:28:0,68,1008:0,68,255:33,0 chr2 155115537 . C . PASS END=155115563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:37:0,95,1347:0,95,255:40,0 chr2 155115564 . T . PASS END=155115564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,6:55:21:55:0,21,1688:0,21,255:40,0 chr2 155115565 . A . PASS END=155115651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,115,1800:0,115,255:40,0 chr2 155157922 . A . PASS END=155157922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 155157923 . T . PASS END=155157930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,79,255:27,0 chr2 155157931 . T . PASS END=155157946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1072:0,83,255:34,0 chr2 155157947 . A . PASS END=155157947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:33,0 chr2 155157948 . G . PASS END=155158066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:34:0,89,1252:0,89,255:40,0 chr2 155158067 . A . PASS END=155158067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:35,0 chr2 155158068 . T . PASS END=155158092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:35:0,81,1215:0,105,255:37,0 chr2 155158093 . A . PASS END=155158099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:31:0,63,945:0,93,255:26,0 chr2 155158100 . C . PASS END=155158102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:27:0,54,810:0,81,255:19,0 chr2 155252503 . G . PASS END=155252642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:30:0,84,1117:0,90,255:40,0 chr2 155265496 . A . PASS END=155265585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,140,255:40,0 chr2 155265586 . G . PASS END=155265594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:48:0,111,1682:0,111,255:40,0 chr2 155295104 . G . PASS END=155295238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:90:45:0,90,1350:0,125,255:40,0 chr2 155302320 . T . PASS END=155302368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,138,255:40,0 chr2 155303080 . A . PASS END=155303265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:57:0,120,1800:0,157,255:40,0 chr2 155306923 . A . PASS END=155307063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:49:0,114,1710:0,114,255:40,0 chr2 155555288 . A . PASS END=155555290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,607:0,51,255:19,0 chr2 155555291 . T . PASS END=155555292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 155555293 . T . PASS END=155555293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 155555294 . G . PASS END=155555307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr2 155555308 . A . PASS END=155555308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 155555309 . T . PASS END=155555309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr2 155555310 . T . PASS END=155555310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 155555311 . T . PASS END=155555320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:26,0 chr2 155555321 . T . PASS END=155555569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:27:0,80,950:0,80,255:40,0 chr2 155555570 . T . PASS END=155555570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1576:0,64,255:40,0 chr2 155555571 . G . PASS END=155555612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:41:0,102,1490:0,107,255:40,0 chr2 155555613 . G . PASS END=155555613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:38,0 chr2 155555614 . G . PASS END=155555672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,99,255:39,0 chr2 155555673 . A . PASS END=155555673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:26,0 chr2 155555674 . C . PASS END=155555676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:28,0 chr2 155555677 . C . PASS END=155555677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 155555678 . C . PASS END=155555678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 155555679 . C . PASS END=155555680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 155555681 . T . PASS END=155555688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 155555689 . C . PASS END=155555689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 155555690 . C . PASS END=155555693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 155555694 . T . PASS END=155555705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:32:0,65,990:0,65,255:26,0 chr2 155555706 . C . PASS END=155555717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 155555718 . T . PASS END=155555722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 155555723 . T . PASS END=155555724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 155555725 . T . PASS END=155555725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 155555726 . G . PASS END=155555730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:27,0 chr2 155555731 . C . PASS END=155555731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 155555732 . C . PASS END=155555736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 155555737 . C . PASS END=155555737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 155555738 . A . PASS END=155555738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 155555739 . T . PASS END=155555742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1039:0,74,255:26,0 chr2 155555743 . A . PASS END=155555743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:26,0 chr2 155555744 . G . PASS END=155555753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,77,255:26,0 chr2 155555754 . C . PASS END=155555757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 155555758 . G . PASS END=155555758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 155555759 . G . PASS END=155555763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1044:0,84,255:30,0 chr2 155555764 . C . PASS END=155555764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 155555765 . A . PASS END=155555804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:30,0 chr2 155555805 . A . PASS END=155555805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr2 155555806 . C . PASS END=155555826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr2 155555827 . G . PASS END=155555889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr2 155555890 . G . PASS END=155555892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 155555893 . C . PASS END=155555896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:27,0 chr2 155555897 . A . PASS END=155555897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,859:0,31,255:23,0 chr2 155555898 . T . PASS END=155555917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr2 155555918 . C . PASS END=155555919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 155555920 . T . PASS END=155555923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 155555924 . T . PASS END=155555928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:27,0 chr2 155555929 . G . PASS END=155555929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 155555930 . G . PASS END=155555930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,988:0,51,255:25,0 chr2 155555931 . T . PASS END=155555940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,939:0,64,255:26,0 chr2 155555941 . G . PASS END=155555958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:28,0 chr2 155555959 . C . PASS END=155555991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,892:0,61,255:26,0 chr2 155555992 . A . PASS END=155555993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr2 155555994 . G . PASS END=155555997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 155555998 . T . LowGQ END=155555998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,729:8,0,255:21,0 chr2 155555999 . C . PASS END=155556002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 155556003 . G . PASS END=155556008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:21,0 chr2 155556009 . T . PASS END=155556009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr2 155556010 . C . PASS END=155556044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,607:0,44,255:19,0 chr2 155556045 . A . PASS END=155556045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 155556046 . G . PASS END=155556047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,554:0,51,255:17,0 chr2 155556048 . A . PASS END=155556048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 155556049 . A . PASS END=155556049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 155566115 . T . PASS END=155566339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:80:32:0,80,1107:0,80,255:40,0 chr2 155711239 . G . PASS END=155711784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:32:0,81,1215:0,91,255:40,0 chr2 155711785 . C . PASS END=155711791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 155711792 . A . PASS END=155711796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 155711797 . G . PASS END=155711797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 155711798 . A . PASS END=155711798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 155711799 . A . PASS END=155711824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:26,0 chr2 155711825 . A . PASS END=155711825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 157180945 . T . PASS END=157180945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 157181058 . G . PASS END=157181058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 157181239 . A . PASS END=157181239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 157181434 . T . PASS END=157181434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,164,255:40,0 chr2 157181594 . T . PASS END=157181594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 157181657 . A . PASS END=157181657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 157182064 . G . PASS END=157182064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 157182256 . T . PASS END=157182357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:35:0,96,1281:0,97,255:40,0 chr2 157182358 . A . PASS END=157182358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1580:0,77,255:38,0 chr2 157182359 . A . PASS END=157182493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:38:0,81,1215:0,85,255:40,0 chr2 157182494 . T . PASS END=157182494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 157182495 . C . PASS END=157182496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:28,0 chr2 157182497 . T . PASS END=157182511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,954:0,67,255:26,0 chr2 157182512 . T . PASS END=157182512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 157182662 . C . PASS END=157182818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:37:0,81,1215:0,101,255:40,0 chr2 157182819 . T . PASS END=157182824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:36:0,72,1080:0,108,255:26,0 chr2 157182825 . C . PASS END=157182826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:57:30:0,57,855:0,90,255:19,0 chr2 157182827 . C . PASS END=157182827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:29:0,60,900:0,71,255:19,0 chr2 157182828 . C . PASS END=157182840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:21:0,48,720:0,59,255:18,0 chr2 157183230 . C . PASS END=157183257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,665:0,63,255:23,0 chr2 157183258 . C . PASS END=157183264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 157183265 . A . PASS END=157183265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 157183266 . G . PASS END=157183283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,823:0,69,255:24,0 chr2 157183284 . T . PASS END=157183287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 157183288 . G . PASS END=157183319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,64,255:25,0 chr2 157183320 . A . PASS END=157183320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:23,0 chr2 157183321 . T . PASS END=157183323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 157183324 . T . PASS END=157183343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1224:0,83,255:31,0 chr2 157183344 . A . PASS END=157183344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr2 157183345 . T . PASS END=157183387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1119:0,86,255:33,0 chr2 157183388 . C . PASS END=157183388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 157183389 . T . PASS END=157183393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 157183394 . G . PASS END=157183432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,845:0,66,255:25,0 chr2 157184350 . G . PASS END=157184350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,566:0,45,255:15,0 chr2 157184363 . C . PASS END=157184366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 157184367 . G . PASS END=157184367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 157184368 . A . PASS END=157184368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 157184369 . A . PASS END=157184387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,674:0,44,255:19,0 chr2 157184388 . G . PASS END=157184399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr2 157184400 . T . PASS END=157184400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr2 157184401 . C . PASS END=157184402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 157184403 . A . PASS END=157184403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 157184404 . C . PASS END=157184412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:25,0 chr2 157184413 . T . PASS END=157184413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:23,0 chr2 157184414 . G . PASS END=157184420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr2 157184421 . G . PASS END=157184421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 157184422 . C . PASS END=157184425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 157184426 . G . PASS END=157184435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:29:0,84,1247:0,87,255:34,0 chr2 157184436 . A . PASS END=157184437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1172:0,67,255:33,0 chr2 157184438 . C . PASS END=157184492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,972:0,85,255:34,0 chr2 157184493 . C . PASS END=157184493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:27,0 chr2 157184494 . C . PASS END=157184498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,92,255:29,0 chr2 157184499 . C . PASS END=157184499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:28,0 chr2 157184500 . G . PASS END=157184500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 157184501 . G . PASS END=157184521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:61:25:0,61,878:0,61,255:25,0 chr2 157184522 . A . PASS END=157184522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 157184523 . A . PASS END=157184525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 157184526 . A . PASS END=157184526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 157184916 . C . PASS END=157184917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1236:0,72,255:37,0 chr2 157184918 . T . PASS END=157185027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:38:0,80,1348:0,80,255:40,0 chr2 157185028 . A . PASS END=157185028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,2 chr2 157185029 . T . PASS END=157185029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:31:39:0,31,1279:0,31,255:32,2 chr2 157185030 . T . PASS END=157185030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr2 157185031 . T . PASS END=157185043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,94,255:34,0 chr2 157185044 . C . PASS END=157185045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,83,255:26,0 chr2 157185835 . C . PASS END=157185844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,848:0,72,255:25,0 chr2 157185845 . C . PASS END=157185845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr2 157185846 . C . PASS END=157185854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:25,0 chr2 157185855 . C . PASS END=157185857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 157185858 . C . PASS END=157185858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 157185859 . A . PASS END=157185895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,994:0,81,255:33,0 chr2 157185896 . T . PASS END=157185896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:27,0 chr2 157185897 . C . PASS END=157185904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:31,0 chr2 157185905 . A . PASS END=157185906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:28,0 chr2 157185907 . A . PASS END=157185907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:28,0 chr2 157185908 . G . PASS END=157185908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:29,0 chr2 157185909 . C . PASS END=157185918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr2 157185919 . C . PASS END=157185921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 157185922 . G . PASS END=157185922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 157185923 . T . PASS END=157185924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1080:0,77,255:28,0 chr2 157185925 . G . PASS END=157185925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 157185926 . G . PASS END=157185926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:28,0 chr2 157185927 . A . PASS END=157185927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 157185928 . G . PASS END=157185928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 157185929 . G . PASS END=157185933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 157185934 . G . PASS END=157185934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 157185935 . C . PASS END=157185939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 157185940 . C . PASS END=157185940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 157185941 . G . PASS END=157185941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 157185942 . A . PASS END=157185994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,808:0,65,255:26,0 chr2 157185995 . A . PASS END=157185995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 157185996 . G . PASS END=157186008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 157186009 . C . PASS END=157186009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr2 157186010 . A . PASS END=157186031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,876:0,72,255:25,0 chr2 157186032 . G . PASS END=157186032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 157186033 . G . PASS END=157186039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:21,0 chr2 157186040 . A . PASS END=157186073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,543:0,42,255:18,0 chr2 157186074 . T . PASS END=157186093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr2 157186094 . A . PASS END=157186095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 157186096 . G . PASS END=157186096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 157186097 . G . PASS END=157186099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:17,0 chr2 157186100 . A . PASS END=157186100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:16,0 chr2 157186101 . C . PASS END=157186136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr2 157186137 . A . PASS END=157186139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 157186140 . C . PASS END=157186146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 157186147 . G . PASS END=157186149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 157186150 . A . PASS END=157186150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 157186151 . G . PASS END=157186160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr2 157186161 . G . PASS END=157186161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 157186162 . C . PASS END=157186162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 157186163 . T . PASS END=157186165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 157186166 . A . PASS END=157186166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 157186167 . A . PASS END=157186167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 157186168 . G . PASS END=157186172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 157186173 . A . PASS END=157186173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,676:0,36,255:18,0 chr2 157186174 . G . PASS END=157186174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 157186175 . A . PASS END=157186176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 157186177 . G . PASS END=157186179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 157186180 . G . PASS END=157186180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,650:0,52,255:20,0 chr2 157186181 . A . PASS END=157186182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,682:0,36,255:20,0 chr2 157186183 . G . PASS END=157186184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:23,0 chr2 157186185 . G . PASS END=157186185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,703:0,52,255:22,0 chr2 157186186 . G . PASS END=157186201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr2 157186202 . C . PASS END=157186202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,788:0,53,255:21,0 chr2 157186203 . T . PASS END=157186210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,878:0,69,255:24,0 chr2 157186211 . A . PASS END=157186211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:19,0 chr2 157186212 . T . PASS END=157186212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 157186213 . C . PASS END=157186219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:25,0 chr2 157186220 . G . PASS END=157186220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 157186221 . T . PASS END=157186252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,823:0,63,255:26,0 chr2 157186253 . A . PASS END=157186253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 157186254 . G . PASS END=157186263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr2 157186264 . G . PASS END=157186274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,679:0,53,255:19,0 chr2 157186275 . T . PASS END=157186276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:39:20:0,39,585:0,53,255:13,0 chr2 157186277 . G . PASS END=157186285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,46,255:16,0 chr2 157186286 . T . PASS END=157186286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:15,0 chr2 157186287 . G . PASS END=157186321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,645:0,54,255:19,0 chr2 157186322 . G . PASS END=157186342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr2 157186343 . G . PASS END=157186462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:28:0,80,1047:0,80,255:40,0 chr2 157186463 . T . PASS END=157186464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:36:0,72,1250:0,72,255:31,0 chr2 157186465 . C . PASS END=157186470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1258:0,81,255:32,0 chr2 157186471 . A . PASS END=157186471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:32,0 chr2 157186472 . G . PASS END=157186627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1255:0,84,255:40,0 chr2 157186628 . T . PASS END=157186628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:34,0 chr2 157186629 . A . PASS END=157186668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,87,255:38,0 chr2 157186669 . G . PASS END=157186669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 157186670 . G . PASS END=157186681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1260:0,87,255:29,0 chr2 157186682 . G . PASS END=157186682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 157186683 . C . PASS END=157186700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1056:0,87,255:29,0 chr2 157188992 . T . PASS END=157189010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:40:0,90,1257:0,90,255:40,0 chr2 157189011 . G C, 163.43 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,18,0:0,21,0:113:201,116,0,301,301,301:255,120,0:0,0:1.6343e+02,1.1343e+02,0.0000e+00,2.9820e+02,3.3298e+02,3.0122e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,13,26:0,0,22,17 chr2 157189012 . T . PASS END=157189022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1341:0,95,255:36,0 chr2 157189031 . G . PASS END=157189031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1349:0,105,255:35,0 chr2 157189092 . G . PASS END=157189092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 157189106 . G . PASS END=157189106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 157189118 . G . PASS END=157189118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 157189169 . G . PASS END=157189169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 157189190 . G . PASS END=157189190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 157189204 . G . PASS END=157189204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr2 157189249 . A . PASS END=157189249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 157189252 . T . PASS END=157189252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 157189302 . T . PASS END=157189302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr2 157332618 . A . PASS END=157332719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:53:0,120,1800:0,149,255:40,0 chr2 157352074 . A . PASS END=157352142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:39:0,111,1415:0,117,255:40,0 chr2 157352556 . A . PASS END=157352685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:89:43:0,89,1481:0,89,255:40,0 chr2 157352686 . G . PASS END=157352727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:99:48:0,111,1596:0,112,255:40,0 chr2 157367308 . G . PASS END=157367432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:40:0,87,1305:0,87,255:40,0 chr2 157368732 . T . PASS END=157368829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:41:0,86,1518:0,86,255:40,0 chr2 157369845 . G . PASS END=157369973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:36:0,108,1327:0,108,255:40,0 chr2 157369974 . G . PASS END=157370008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:80:54:0,80,1305:0,80,255:40,0 chr2 157406120 . G . PASS END=157406120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 157406121 . A . PASS END=157406121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 157406122 . C . PASS END=157406211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1031:0,81,255:37,0 chr2 157406212 . T . PASS END=157406214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 157406215 . C . PASS END=157406215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:35,0 chr2 157406216 . T . PASS END=157406248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1147:0,80,255:37,0 chr2 157406249 . G A, 50.00 PASS DP=32;MQ=248.69;MQRankSum=4.704;ReadPosRankSum=-1.052;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:7,7,0:7,10,0:48:85,0,49,600,472,1072:255,0,255:13,0:5.0000e+01,6.9116e-05,5.2274e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,6,11:3,11,14,3 chr2 157406250 . T . PASS END=157406253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 157406254 . A . PASS END=157406262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,74,255:26,0 chr2 157406263 . C . PASS END=157406273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:28:0,42,630:0,84,255:17,0 chr2 157406274 . T . PASS END=157406279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:19:0,33,495:0,44,255:13,0 chr2 157406280 . C . PASS END=157406280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 157406281 . A . PASS END=157406284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:18:0,33,495:0,54,255:12,0 chr2 157407114 . G . PASS END=157407250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:37:0,81,1215:0,87,255:40,0 chr2 157407251 . T . PASS END=157407256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,92,255:26,0 chr2 157407257 . A . PASS END=157407257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:24,0 chr2 157407258 . G . PASS END=157407258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 157413901 . C . PASS END=157413908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr2 157413909 . G . PASS END=157413917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:30,0 chr2 157413918 . T . PASS END=157413918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 157413919 . T . PASS END=157413921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1087:0,93,255:31,0 chr2 157413922 . T . PASS END=157413922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 157413923 . G . PASS END=157414094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:82:31:0,82,1186:0,82,255:40,0 chr2 157425337 . T . PASS END=157425457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:50:0,114,1710:0,120,255:40,0 chr2 157425458 . T . PASS END=157425461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,99,1530:0,99,255:35,0 chr2 157425462 . A . PASS END=157425462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1512:0,63,255:32,0 chr2 157425463 . C . PASS END=157425469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:40:0,87,1305:0,104,255:31,0 chr2 157425470 . A . PASS END=157425471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:54:39:0,54,810:0,117,255:18,0 chr2 157425875 . G . PASS END=157426026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:80:32:0,80,1139:0,80,255:40,0 chr2 157426027 . C . PASS END=157426050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:24,0 chr2 157426599 . G . PASS END=157426603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:31,0 chr2 157426604 . A . PASS END=157426604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 157426605 . C . PASS END=157426697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1102:0,86,255:40,0 chr2 157426698 . C . PASS END=157426698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 157426699 . T . PASS END=157426701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 157426702 . T . PASS END=157426702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr2 157426703 . G . PASS END=157426707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 157426708 . A . PASS END=157426711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 157426712 . T . PASS END=157426713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 157426714 . C . PASS END=157426719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1086:0,74,255:27,0 chr2 157426720 . T . PASS END=157426720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,968:0,57,255:26,0 chr2 157426721 . T . PASS END=157426721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 157426722 . G . PASS END=157426726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 157426727 . A . PASS END=157426730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:29:0,60,900:0,71,255:23,0 chr2 157427646 . G . PASS END=157427663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr2 157427664 . G . PASS END=157427799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1016:0,81,255:40,0 chr2 157427800 . A . PASS END=157427800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr2 157427801 . G . PASS END=157427802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 157427803 . A . PASS END=157427804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 157435401 . G . PASS END=157435513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,107,1459:0,107,255:40,0 chr2 157435598 . G . PASS END=157435676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:59:0,120,1800:0,160,255:40,0 chr2 157436202 . A . PASS END=157436300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,2:103:99:76:0,120,1800:0,179,255:40,0 chr2 157439305 . C . PASS END=157439430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,106,1714:0,106,255:40,0 chr2 157467236 . A . PASS END=157467239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:83:0,120,1800:0,203,255:40,0 chr2 158114595 . A . PASS END=158114913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1157:0,93,255:40,0 chr2 158114914 . A . PASS END=158114914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 158114915 . A . PASS END=158114925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:30,0 chr2 158114926 . A . PASS END=158114926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 158114927 . A . PASS END=158114936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr2 158114937 . C . PASS END=158114937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 158114938 . A . PASS END=158114941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 158114942 . T . PASS END=158114942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 158114943 . G . PASS END=158114943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,970:0,35,255:25,0 chr2 158114944 . C . PASS END=158114946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 158114947 . T . PASS END=158114948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 158114949 . G . PASS END=158114951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 158114952 . A . PASS END=158114963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:29:0,66,990:0,82,255:26,0 chr2 158114964 . G . PASS END=158114964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:24,0 chr2 158114965 . T . PASS END=158114975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,74,255:26,0 chr2 158114976 . C . PASS END=158114979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 158114980 . C . PASS END=158114981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1092:0,74,255:30,0 chr2 158114982 . G . PASS END=158114982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 158114983 . C . PASS END=158114998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1033:0,73,255:26,0 chr2 158114999 . C . PASS END=158115018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:32,0 chr2 158115019 . A . PASS END=158115020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:30,0 chr2 158115021 . A . PASS END=158115032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1166:0,96,255:34,0 chr2 158115033 . A . PASS END=158115033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr2 158115034 . G . PASS END=158115063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1116:0,80,255:40,0 chr2 158115064 . A . PASS END=158115064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1446:0,77,255:40,0 chr2 158115065 . G . PASS END=158116031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:33:0,83,1277:0,83,255:40,0 chr2 158116032 . G . PASS END=158116043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:26,0 chr2 158116044 . G . PASS END=158116048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr2 158123325 . A . PASS END=158123368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:52:0,120,1800:0,140,255:40,0 chr2 158140759 . C . PASS END=158140905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:32:0,88,1189:0,88,255:40,0 chr2 158140906 . T . PASS END=158140917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:23,0 chr2 158140918 . C . PASS END=158140918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr2 158140919 . T . PASS END=158140919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 158140920 . C . PASS END=158140926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 158140927 . G . PASS END=158140931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 158140932 . T . PASS END=158140960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,629:0,43,255:19,0 chr2 158142527 . A . PASS END=158142646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:35:0,87,1305:0,88,255:40,0 chr2 158152175 . G . PASS END=158152310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:88:46:0,88,1530:0,88,255:40,0 chr2 158152906 . T . PASS END=158153025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:40:0,81,1215:0,118,255:40,0 chr2 158156060 . G . PASS END=158156177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:44:0,81,1215:0,109,255:40,0 chr2 158157188 . G . PASS END=158157189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 158157190 . G . PASS END=158157223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1016:0,81,255:34,0 chr2 158157224 . T . PASS END=158157224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:33,0 chr2 158157225 . G . PASS END=158157323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:36:0,87,1284:0,87,255:40,0 chr2 158157324 . T . PASS END=158157360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,147,255:40,0 chr2 158157361 . C T, 215.54 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,29,0:0,27,0:166:253,169,0,2164,169,2164:255,168,0:0,0:2.1554e+02,1.6554e+02,0.0000e+00,4.5000e+02,2.0031e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,21:0,0,30,26 chr2 158157362 . G . PASS END=158157398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,153,255:40,0 chr2 158157399 . A . PASS END=158157481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:41:0,84,1260:0,111,255:40,0 chr2 158157482 . A . PASS END=158157485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:36:0,75,1125:0,108,255:26,0 chr2 158157486 . C . PASS END=158157488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 158157489 . C . PASS END=158157496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,83,255:24,0 chr2 158157497 . A . PASS END=158157511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:20:0,51,765:0,60,255:19,0 chr2 158162261 . C . PASS END=158162341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:67:0,120,1800:0,187,255:40,0 chr2 158165079 . C . PASS END=158165090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:26,0 chr2 158165091 . A . PASS END=158165091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 158165092 . A . PASS END=158165092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 158165093 . T . PASS END=158165230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1102:0,86,255:40,0 chr2 158165231 . T . PASS END=158165239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:25,0 chr2 158165240 . G . PASS END=158165240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 158167672 . T . PASS END=158167859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:84:39:0,84,1260:0,117,255:40,0 chr2 158167860 . A . PASS END=158167860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,117,255:25,0 chr2 158177783 . T . PASS END=158178303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:88:36:0,88,1395:0,88,255:40,1 chr2 158181182 . C . PASS END=158181274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:51:0,120,1800:0,141,255:40,0 chr2 158181735 . T . PASS END=158181748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:42:0,117,1755:0,122,255:40,0 chr2 158181914 . C . PASS END=158181916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1350:0,105,255:30,0 chr2 158181917 . T . PASS END=158181925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,1080:0,66,255:25,0 chr2 158181926 . T . PASS END=158181926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1103:0,47,255:22,0 chr2 158181927 . G . PASS END=158181941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:26,0 chr2 158181942 . G . PASS END=158181942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 158181943 . T . PASS END=158181943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 158181944 . T . PASS END=158181954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,86,255:31,0 chr2 158181955 . T . PASS END=158181955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1127:0,63,255:31,0 chr2 158181956 . T . PASS END=158181956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 158181957 . C . PASS END=158181957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr2 158181958 . C . PASS END=158181958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 158181959 . C . PASS END=158181962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:31,0 chr2 158181963 . T . PASS END=158182162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1166:0,85,255:40,0 chr2 158182163 . G . PASS END=158182164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 158182165 . T . PASS END=158182168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 158182169 . T . PASS END=158182186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr2 158183985 . T . PASS END=158183991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,209,255:40,0 chr2 158272189 . T . PASS END=158272192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 158272193 . A . PASS END=158272197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 158272198 . A . PASS END=158272198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr2 158272199 . C . PASS END=158272200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 158272201 . T . PASS END=158272201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 158272202 . T . PASS END=158272207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,732:0,66,255:23,0 chr2 158272208 . T . PASS END=158272208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 158272209 . C . PASS END=158272221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:23,0 chr2 158272222 . A . PASS END=158272240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,988:0,84,255:34,0 chr2 158272241 . T . PASS END=158272241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:31,0 chr2 158272242 . T . PASS END=158272288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1141:0,82,255:35,0 chr2 158272289 . G . PASS END=158272290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:36:0,72,1170:0,72,255:28,0 chr2 158272291 . C . PASS END=158272292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 158272293 . C . PASS END=158272297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1127:0,63,255:28,0 chr2 158272298 . A . PASS END=158272298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1070:0,54,255:28,0 chr2 158272299 . T . PASS END=158272299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:27,0 chr2 158272300 . G . PASS END=158272304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,958:0,48,255:29,0 chr2 158272305 . A . PASS END=158272305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 158272306 . T . PASS END=158272310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:29,0 chr2 158272311 . T . PASS END=158272311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 158272312 . G . PASS END=158272312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr2 158272313 . C . PASS END=158272313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 158272314 . C . PASS END=158272316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1033:0,54,255:27,0 chr2 158272317 . C . PASS END=158272317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr2 158272318 . C . PASS END=158272376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1238:0,95,255:37,0 chr2 158272377 . A . PASS END=158272377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:31,0 chr2 158272378 . T . PASS END=158272408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1103:0,83,255:31,0 chr2 158272409 . G . PASS END=158272409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 158272410 . G . PASS END=158272413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 158272414 . A . PASS END=158272440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,926:0,70,255:26,0 chr2 158272441 . C . PASS END=158272451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 158272452 . C . PASS END=158272454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 158272455 . C . PASS END=158272518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr2 158272519 . C . PASS END=158272547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,747:0,60,255:26,0 chr2 158272548 . A . PASS END=158272548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 158272549 . T . PASS END=158272551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,800:0,61,255:26,0 chr2 158272552 . T . PASS END=158272553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 158272554 . G . PASS END=158272554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 158272555 . A . PASS END=158272555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 158272556 . T . PASS END=158272556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 158272557 . T . PASS END=158272567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:28,0 chr2 158272568 . A . PASS END=158272574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 158272575 . G . PASS END=158272597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1094:0,87,255:31,0 chr2 158272598 . A . PASS END=158272598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 158272599 . A . PASS END=158272609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1058:0,90,255:30,0 chr2 158272610 . T . PASS END=158272610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:27,0 chr2 158272611 . C . PASS END=158272614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 158272615 . C . PASS END=158272615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 158272616 . A . PASS END=158272630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 158272631 . A . PASS END=158272631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr2 158272632 . A . PASS END=158272632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 158272633 . A . PASS END=158272633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:28,0 chr2 158272634 . C . PASS END=158272651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr2 158272652 . T . PASS END=158272655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 158275035 . C . PASS END=158275036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1513:0,90,255:40,0 chr2 158275037 . T . PASS END=158275037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:63:43:0,63,1393:0,63,255:37,0 chr2 158275038 . G . PASS END=158275039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1483:0,112,255:40,0 chr2 158275040 . A . PASS END=158275040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1304:0,57,255:38,0 chr2 158275041 . G . PASS END=158275057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:43:0,82,1448:0,82,255:40,0 chr2 158275058 . A . PASS END=158275058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1543:0,74,255:37,0 chr2 158275059 . A . PASS END=158275068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:44:0,85,1350:0,85,255:39,0 chr2 158275069 . T . PASS END=158275082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:60:36:0,60,900:0,76,255:23,0 chr2 158275083 . A . PASS END=158275095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:45:36:0,45,675:0,61,255:19,0 chr2 158275096 . A . PASS END=158275101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:30:37:0,30,450:0,77,255:13,0 chr2 158283863 . C . PASS END=158283900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,109,1787:0,109,255:40,0 chr2 158283901 . T . PASS END=158283932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,111,1665:0,117,255:40,0 chr2 158287071 . G . PASS END=158287079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:24,0 chr2 158287080 . T . PASS END=158287080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 158287081 . T . PASS END=158287088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:26,0 chr2 158287089 . G . PASS END=158287089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 158287090 . A . PASS END=158287091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:26,0 chr2 158287092 . C . PASS END=158287100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:30,0 chr2 158287101 . T . PASS END=158287101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 158287102 . C . PASS END=158287105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 158287106 . G . PASS END=158287112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 158287113 . T . PASS END=158287137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1048:0,84,255:29,0 chr2 158287138 . C . PASS END=158287150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,68,255:25,0 chr2 158287151 . T . PASS END=158287151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:21,0 chr2 158287152 . G . PASS END=158287164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 158287372 . C . PASS END=158287373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr2 158287374 . G . PASS END=158287376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr2 158287377 . T . PASS END=158287377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 158287378 . G . PASS END=158287392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,64,255:26,0 chr2 158287393 . G . PASS END=158287394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 158287395 . G . PASS END=158287397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 158287398 . G . PASS END=158287467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,92,255:37,0 chr2 158287468 . T . PASS END=158287468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:28,0 chr2 158287469 . G . PASS END=158287473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 158287474 . A . PASS END=158287474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1098:0,68,255:29,0 chr2 158290882 . C . PASS END=158290936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,105,1575:0,114,255:40,0 chr2 158291210 . C . PASS END=158291225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,197,255:40,0 chr2 158291226 . A . PASS END=158291259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,157,255:40,0 chr2 158295464 . T . PASS END=158295475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,114,1638:0,114,255:40,0 chr2 158300359 . C . PASS END=158300532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1139:0,80,255:40,0 chr2 158390430 . T . PASS END=158390431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 158390432 . A . PASS END=158390432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:32,0 chr2 158390433 . G . PASS END=158390555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1227:0,84,255:40,0 chr2 158395085 . T . PASS END=158395116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,144,255:40,0 chr2 158395117 . G . PASS END=158395191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:38:0,93,1395:0,101,255:40,0 chr2 158395192 . G . PASS END=158395201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:32:0,66,990:0,92,255:26,0 chr2 158395202 . C . PASS END=158395215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:43:19:0,43,668:0,43,255:18,0 chr2 158397602 . C . PASS END=158397726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,114,1710:0,131,255:40,0 chr2 158399218 . C . PASS END=158399224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr2 158399225 . T . PASS END=158399225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 158399226 . T . PASS END=158399374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:93:31:0,93,1156:0,93,255:40,0 chr2 158400957 . C . PASS END=158401099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:40:0,106,1413:0,106,255:40,0 chr2 158401100 . C . PASS END=158401124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,102,1530:0,103,255:40,0 chr2 158406674 . C . PASS END=158406894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:39:0,87,1305:0,117,255:40,0 chr2 158406895 . A . PASS END=158406904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:35:0,60,900:0,89,255:25,0 chr2 158412605 . C . PASS END=158412628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,546:0,40,255:19,0 chr2 158412629 . C . PASS END=158412629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 158412630 . A . PASS END=158412630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 158412631 . T . PASS END=158412641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr2 158412642 . A . PASS END=158412658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,966:0,84,255:30,0 chr2 158412659 . C . PASS END=158412660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr2 158412661 . G . PASS END=158412661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 158412662 . C . PASS END=158412662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1041:0,63,255:28,0 chr2 158412663 . A . PASS END=158412667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 158412668 . C . PASS END=158412669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1047:0,74,255:29,0 chr2 158412670 . A . PASS END=158412674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 158412675 . G . PASS END=158412675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 158412676 . C . PASS END=158412832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1101:0,80,255:38,0 chr2 158412833 . C . PASS END=158412833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:29,0 chr2 158412834 . A . PASS END=158412835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1169:0,80,255:31,0 chr2 158412836 . T . PASS END=158412836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:30,0 chr2 158412837 . T . PASS END=158412839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1185:0,80,255:31,0 chr2 158412840 . T . PASS END=158412840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1131:0,66,255:27,0 chr2 158412841 . G . PASS END=158412843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 158412844 . G . PASS END=158412844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 158443699 . C . PASS END=158443701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,964:0,84,255:29,0 chr2 158443702 . T . PASS END=158443702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 158443703 . T . PASS END=158443705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 158443706 . A . PASS END=158443706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 158443707 . A . PASS END=158443851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:90:30:0,90,1078:0,90,255:40,0 chr2 158443852 . T . PASS END=158443888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,129,255:40,0 chr2 158443889 . G A, 49.40 PASS DP=54;MQ=250.00;MQRankSum=6.209;ReadPosRankSum=3.493;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,24,0:0.453,0.000:53:16,17,0:13,7,0:48:84,0,50,834,940,1775:255,0,255:26,0:4.9399e+01,7.1705e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,14,6,18:12,17,11,13 chr2 158443890 . A . PASS END=158443924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:38:0,93,1395:0,114,255:40,0 chr2 158443925 . C . PASS END=158443926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:37:0,75,1125:0,111,255:25,0 chr2 158443927 . G . PASS END=158443929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,108,255:25,0 chr2 158485084 . C . PASS END=158485091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,925:0,78,255:26,0 chr2 158485092 . A . PASS END=158485092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:23,0 chr2 158485093 . G . PASS END=158485105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:24,0 chr2 158485106 . T . PASS END=158485106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 158485107 . G . PASS END=158485128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,886:0,61,255:25,0 chr2 158485129 . G . PASS END=158485131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 158485132 . G . PASS END=158485132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 158485133 . C . PASS END=158485136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 158485137 . G . PASS END=158485142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 158485143 . A . PASS END=158485156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,729:0,57,255:19,0 chr2 158593006 . C . PASS END=158593006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 158593291 . T . PASS END=158593292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:100:0,120,1800:0,255,255:40,0 chr2 158593332 . T . PASS END=158593332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:99:0,120,1800:0,255,255:40,0 chr2 158593543 . C . PASS END=158593543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 158593622 . C . PASS END=158593622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 158593729 . T . PASS END=158593729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 158593793 . G . PASS END=158593793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 158593833 . T . PASS END=158593833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,946:0,45,255:26,0 chr2 158593861 . G . PASS END=158593861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 158593906 . G . PASS END=158593906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 158594043 . T . PASS END=158594177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,111,1653:0,111,255:40,0 chr2 158594952 . C . PASS END=158594955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,114,1710:0,120,255:40,0 chr2 158594956 . T . PASS END=158594956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:77:49:0,77,1595:0,77,255:40,0 chr2 158594957 . C . PASS END=158595082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,117,1729:0,117,255:40,0 chr2 158617392 . C . PASS END=158617396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,989:0,87,255:31,0 chr2 158617397 . C . PASS END=158617397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 158617398 . T . PASS END=158617519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:32:0,82,1180:0,82,255:40,0 chr2 158617520 . T . PASS END=158617520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:41:43:0,41,1311:0,41,255:35,0 chr2 158617521 . T . PASS END=158617565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:30:0,82,1105:0,82,255:37,0 chr2 158617566 . T . PASS END=158617566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr2 158617567 . C . PASS END=158617571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 158617572 . A . PASS END=158617572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 158617573 . A . PASS END=158617584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 158617585 . C . PASS END=158617589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 158622433 . C . PASS END=158622434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 158622435 . A . PASS END=158622435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 158622436 . A . PASS END=158622443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr2 158622444 . A . PASS END=158622675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:39:0,90,1350:0,96,255:40,0 chr2 158622676 . A . PASS END=158622677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 158622678 . T . PASS END=158622679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 158622680 . T . PASS END=158622705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,914:0,62,255:26,0 chr2 158622706 . A . PASS END=158622708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 158626880 . C . PASS END=158626880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 158626881 . T . PASS END=158626886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 158626887 . A . PASS END=158626887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 158626888 . T . PASS END=158626890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 158626891 . T . PASS END=158626900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr2 158626901 . G . PASS END=158626901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 158626902 . C . PASS END=158626904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 158626905 . C . PASS END=158626942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1062:0,80,255:39,0 chr2 158626943 . T . PASS END=158626969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:97:38:0,97,1246:0,97,255:39,0 chr2 158626970 . C . PASS END=158626970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr2 158626971 . G . PASS END=158626979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1382:0,101,255:38,0 chr2 158626980 . C T, 164.38 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,18,0:0,21,0:114:202,117,0,1504,117,1504:255,117,0:0,0:1.6438e+02,1.1438e+02,0.0000e+00,4.5000e+02,1.4915e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,24:0,0,26,13 chr2 158626981 . T . PASS END=158627003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1343:0,97,255:36,0 chr2 158627004 . C . PASS END=158627005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:36:0,78,1170:0,108,255:26,0 chr2 158627006 . C . PASS END=158627009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 158627010 . A . PASS END=158627016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr2 158627017 . C . PASS END=158627017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 158627018 . T . PASS END=158627018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr2 158627019 . G . PASS END=158627023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 158627024 . T . PASS END=158627025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 158627026 . C . PASS END=158627026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 158630600 . C . PASS END=158630699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:85:30:0,85,1305:0,85,255:40,0 chr2 158634640 . T . PASS END=158634640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 158634643 . T . PASS END=158634653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:18,0 chr2 158634654 . T . PASS END=158634654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 158634655 . G . PASS END=158634656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 158634657 . C . PASS END=158634661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr2 158634662 . A . PASS END=158634662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr2 158634663 . C . PASS END=158634669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr2 158634670 . G . PASS END=158634672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 158634673 . G . PASS END=158634680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:25,0 chr2 158634681 . C . PASS END=158634744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,958:0,80,255:33,0 chr2 158634745 . T . PASS END=158634745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 158634746 . C . PASS END=158634750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1133:0,80,255:30,0 chr2 158634751 . A . PASS END=158634751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr2 158634752 . G . PASS END=158634775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1186:0,96,255:34,0 chr2 158634776 . A . PASS END=158634777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 158634778 . A . PASS END=158634785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1210:0,86,255:34,0 chr2 158634786 . C . PASS END=158634793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:31:0,63,945:0,93,255:24,0 chr2 158634794 . A . PASS END=158634794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:20,0 chr2 158634795 . C . PASS END=158634797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:29:0,60,900:0,71,255:20,0 chr2 158634798 . A . PASS END=158634798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,59,255:19,0 chr2 158634799 . G . PASS END=158634799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 158634800 . A . PASS END=158634800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:20,0 chr2 158634801 . G . PASS END=158634801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:20,0 chr2 158634802 . A . PASS END=158634803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 158634804 . T . PASS END=158634804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr2 158634805 . A . PASS END=158634808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 158634809 . A . PASS END=158634842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr2 158634843 . G . PASS END=158634843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 158634844 . G . PASS END=158634844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 158634845 . A . PASS END=158634854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:15:0,34,540:0,34,255:13,0 chr2 158636849 . C . PASS END=158636857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 158636858 . G . PASS END=158636858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 158636859 . C . PASS END=158636866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 158636867 . C . PASS END=158636872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 158636873 . T . PASS END=158636878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr2 158636879 . T . PASS END=158636890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 158636891 . C . PASS END=158636891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 158636892 . C . PASS END=158636903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,590:0,44,255:18,0 chr2 158636904 . C . PASS END=158636907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 158636908 . A . PASS END=158636908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 158636909 . C . PASS END=158636909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 158636910 . G A, 116.22 PASS DP=23;MQ=249.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,8,0:0,15,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,8:0,0,14,9 chr2 158636911 . G . PASS END=158636931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:23,0 chr2 158636932 . G . PASS END=158636932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 158636933 . T . PASS END=158636943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 158636944 . A . PASS END=158636944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:25,0 chr2 158636945 . T . PASS END=158636947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,938:0,78,255:26,0 chr2 158636948 . T . PASS END=158636954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 158636955 . C . PASS END=158636960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 158636961 . A . PASS END=158636974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 158636975 . C . PASS END=158636984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 158636985 . G . PASS END=158636985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 158636986 . A . PASS END=158637004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1017:0,84,255:28,0 chr2 158637005 . T . PASS END=158637005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 158637006 . G . PASS END=158637006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 158637007 . C . PASS END=158637023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1008:0,71,255:26,0 chr2 158637024 . C . PASS END=158637024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 158637025 . T . PASS END=158637025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 158637026 . G . PASS END=158637066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1191:0,83,255:35,0 chr2 158637067 . T . PASS END=158637068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1225:0,66,255:33,1 chr2 158637069 . A . PASS END=158637079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1249:0,89,255:34,0 chr2 158637080 . T . PASS END=158637080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1154:0,72,255:27,0 chr2 158637081 . G . PASS END=158637087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1271:0,89,255:30,0 chr2 158637088 . T . PASS END=158637088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 158637089 . T . PASS END=158637090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:30,0 chr2 158637091 . G . PASS END=158637094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 158637095 . T . PASS END=158637108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:26:0,69,1035:0,74,255:24,0 chr2 158637109 . T . PASS END=158637109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,902:0,50,255:23,0 chr2 158637110 . C . PASS END=158637112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:24,0 chr2 158655939 . C . PASS END=158656005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,134,255:40,0 chr2 158674944 . G . PASS END=158674944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 158674988 . C . PASS END=158674988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 158731486 . C . LowGQ END=158731486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,3:8:0:8:0,0,122:26,0,148:5,0 chr2 158851711 . A . PASS END=158851771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:88:42:0,88,1512:0,88,255:40,0 chr2 158958552 . G . PASS END=158958637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:99:49:0,120,1800:0,126,255:40,0 chr2 158962611 . A . PASS END=158962728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,120,1800:0,120,255:40,0 chr2 158971613 . T . PASS END=158971613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1065:0,60,255:31,0 chr2 158971614 . T . PASS END=158971624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1166:0,83,255:37,0 chr2 158971625 . G . PASS END=158971625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:38,0 chr2 158971626 . G . PASS END=158971765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:40:0,87,1440:0,87,255:40,0 chr2 158971766 . A . PASS END=158971771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:34:0,66,990:0,102,255:26,0 chr2 158974336 . C . PASS END=158974336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 158974337 . A . PASS END=158974337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 158974338 . C . PASS END=158974450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1286:0,84,255:40,0 chr2 158977921 . G . PASS END=158978130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:84:29:0,84,1086:0,87,255:40,0 chr2 158979883 . C . PASS END=158979909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:29:0,84,1102:0,84,255:40,0 chr2 158979910 . A . PASS END=158980079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:82:33:0,82,1239:0,82,255:40,0 chr2 158980261 . G . PASS END=158980407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:88:42:0,88,1527:0,88,255:40,0 chr2 158984477 . C . PASS END=158984511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:95:0,120,1800:0,236,255:40,0 chr2 158991260 . C . PASS END=158991261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 158991262 . G . PASS END=158991262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:24,0 chr2 158991263 . C . PASS END=158991402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1016:0,81,255:40,0 chr2 159028625 . C . PASS END=159028762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:96:45:0,96,1440:0,117,255:40,0 chr2 159028763 . A . PASS END=159028764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:44:0,93,1395:0,132,255:31,0 chr2 159028765 . A . PASS END=159028765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1372:0,66,255:29,0 chr2 159028766 . A . PASS END=159028771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:40:0,90,1350:0,104,255:31,0 chr2 159033033 . C . PASS END=159033173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:54:0,120,1800:0,138,255:40,0 chr2 159035391 . C . PASS END=159035508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:92:36:0,92,1457:0,92,255:40,0 chr2 159077107 . C . PASS END=159077225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,146,255:40,1 chr2 159107284 . T . PASS END=159107424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:56:0,120,1800:0,131,255:40,0 chr2 159108369 . C . PASS END=159108407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:88:0,120,1800:0,254,255:40,0 chr2 159165945 . C . PASS END=159165948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 159165949 . G . PASS END=159165949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:29,0 chr2 159165950 . C . PASS END=159166031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:30:0,83,1141:0,83,255:40,0 chr2 159166032 . A . PASS END=159166068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:55:0,120,1800:0,165,255:40,0 chr2 159166069 . T C, 221.09 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,34,0:0,24,0:171:259,174,0,2188,174,2188:255,174,0:0,0:2.2109e+02,1.7109e+02,0.0000e+00,4.5000e+02,2.0586e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,29:0,0,31,27 chr2 159166070 . T . PASS END=159166106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,126,255:40,0 chr2 159166107 . C . PASS END=159166151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,114,1590:0,116,255:40,0 chr2 159170268 . C . PASS END=159170406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,103,1571:0,103,255:40,0 chr2 159181423 . C . PASS END=159181508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:81:0,120,1800:0,181,255:40,0 chr2 159195234 . T . PASS END=159195419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,109,1739:0,109,255:40,0 chr2 159195502 . C . PASS END=159195597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,151,255:40,0 chr2 159196754 . C . PASS END=159196905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:58:0,120,1800:0,141,255:40,0 chr2 159197110 . C . PASS END=159197192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:99:72:0,120,1800:0,190,255:40,0 chr2 159201727 . C . PASS END=159201830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:50:0,120,1800:0,122,255:40,1 chr2 159214961 . C . PASS END=159215081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:35:0,81,1215:0,82,255:40,0 chr2 159215082 . T . PASS END=159215082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1156:0,75,255:27,0 chr2 159222526 . C . PASS END=159222588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:69:0,120,1800:0,183,255:40,0 chr2 159312927 . C . PASS END=159312951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,171,255:40,0 chr2 159389697 . A . PASS END=159389702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 159389703 . G . PASS END=159389703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 159389704 . C . PASS END=159389828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:39:0,84,1419:0,84,255:40,0 chr2 159389950 . G . PASS END=159389951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1297:0,75,255:36,0 chr2 159389952 . G . PASS END=159389952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 159389953 . T . PASS END=159389953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1150:0,51,255:34,0 chr2 159389954 . T . PASS END=159389979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:40:0,91,1443:0,91,255:40,0 chr2 159433783 . G . PASS END=159433837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1188:0,83,255:36,0 chr2 159433838 . C . PASS END=159433838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr2 159433839 . C . PASS END=159433860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1186:0,83,255:36,0 chr2 159433861 . C . PASS END=159433861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1100:0,66,255:29,0 chr2 159433862 . T . PASS END=159433866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 159433867 . G . PASS END=159433894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr2 159433895 . G . PASS END=159433895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 159434681 . T . PASS END=159434723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:76:0,120,1800:0,229,255:40,0 chr2 159459582 . C . PASS END=159459616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:100:0,120,1800:0,255,255:40,0 chr2 159477502 . A . PASS END=159477503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 159477504 . G . PASS END=159477505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 159477506 . G . PASS END=159477541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,884:0,69,255:24,0 chr2 159477542 . C . PASS END=159477542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:21,0 chr2 159477543 . G . PASS END=159477550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 159477551 . G . PASS END=159477557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1125:0,84,255:30,0 chr2 159477558 . A . PASS END=159477558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 159477559 . A . PASS END=159477562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr2 159477563 . T . PASS END=159477565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:25,0 chr2 159477566 . C . PASS END=159477574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:29,0 chr2 159477575 . A . PASS END=159477575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 159477576 . G . PASS END=159477578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 159477579 . C . PASS END=159477589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 159477590 . A . PASS END=159477590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr2 159477591 . A . PASS END=159477594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,962:0,70,255:26,0 chr2 159477595 . T . PASS END=159477598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 159477599 . T . PASS END=159477614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:26,0 chr2 159477615 . T . PASS END=159477615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,886:0,50,255:23,0 chr2 159477616 . C . PASS END=159477631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,886:0,62,255:26,0 chr2 159477632 . G . PASS END=159477632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,782:0,28,255:21,0 chr2 159477633 . G . PASS END=159477633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 159477743 . G . PASS END=159477933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:85:34:0,85,1418:0,85,255:40,0 chr2 159481390 . C . PASS END=159481396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr2 159481397 . T . PASS END=159481398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1015:0,81,255:28,0 chr2 159481399 . G . PASS END=159481399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr2 159481400 . C . PASS END=159481679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:30:0,80,1144:0,80,255:40,0 chr2 159481680 . T . PASS END=159481710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,862:0,61,255:25,0 chr2 159481711 . A . PASS END=159481711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 159481712 . C . PASS END=159481732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,853:0,69,255:23,0 chr2 159481733 . T . PASS END=159481733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr2 159481734 . G . PASS END=159481771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,65,255:26,0 chr2 159481772 . C . PASS END=159481773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 159481774 . C . PASS END=159481784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,980:0,70,255:26,0 chr2 159481785 . G . PASS END=159481791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr2 159481792 . T . PASS END=159481792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 159481793 . C . PASS END=159481808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:29:0,82,1042:0,82,255:31,0 chr2 159481809 . A . PASS END=159481809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1041:0,44,255:29,0 chr2 159481810 . G . PASS END=159481930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:31:0,83,1224:0,83,255:40,0 chr2 159481931 . G . PASS END=159481931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 159481932 . C . PASS END=159481934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 159481935 . G . PASS END=159481939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:23,0 chr2 159488265 . G . PASS END=159488443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:33:0,83,1181:0,83,255:40,0 chr2 159488444 . A . PASS END=159488453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,74,255:22,0 chr2 159490582 . T . PASS END=159490584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 159490585 . G . PASS END=159490742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,978:0,81,255:40,0 chr2 159490743 . C . PASS END=159490743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:31,0 chr2 159490744 . C . PASS END=159490763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1172:0,83,255:33,0 chr2 159490764 . A . PASS END=159490767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:76:31:0,76,1040:0,76,255:26,0 chr2 159490768 . C . PASS END=159490768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:27,0 chr2 159490769 . C . PASS END=159490776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1055:0,74,255:26,0 chr2 159490777 . T . PASS END=159490780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 159490781 . C . PASS END=159490783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 159490784 . C . PASS END=159490791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 159490792 . A . PASS END=159490792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 159490793 . G . PASS END=159490797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 159490798 . C . PASS END=159490801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 159497139 . G . PASS END=159497271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:29:0,83,1141:0,83,255:40,0 chr2 159498998 . G . PASS END=159499211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:31:0,93,1141:0,93,255:40,0 chr2 159514643 . G . PASS END=159514813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:90:41:0,90,1350:0,96,255:40,0 chr2 159514814 . C . PASS END=159514816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:25,0 chr2 159514817 . G . PASS END=159514821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,83,255:27,0 chr2 159514822 . C . PASS END=159514822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 159514823 . T . PASS END=159514826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 159517845 . G . PASS END=159517962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:36:0,96,1362:0,96,255:40,0 chr2 159518074 . G . PASS END=159518151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,113,1572:0,113,255:40,0 chr2 159519409 . A . PASS END=159519411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr2 159519412 . G . PASS END=159519421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,971:0,81,255:28,0 chr2 159519422 . G . PASS END=159519422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 159519423 . C . PASS END=159519454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1070:0,84,255:34,0 chr2 159519455 . T . PASS END=159519455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:31,0 chr2 159519456 . G . PASS END=159519484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1296:0,92,255:35,0 chr2 159519485 . T . PASS END=159519485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:34,0 chr2 159519486 . G . PASS END=159519522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1257:0,94,255:35,0 chr2 159519523 . T . PASS END=159519523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,950:0,62,255:30,0 chr2 159519524 . C . PASS END=159519551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:33,0 chr2 159519552 . C . PASS END=159519566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:23,0 chr2 159519567 . G . PASS END=159519567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr2 159519568 . A . PASS END=159519568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,836:0,59,255:22,0 chr2 159519569 . A . PASS END=159519573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 159519574 . A . PASS END=159519574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,61,255:18,0 chr2 159519575 . A . PASS END=159519580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:21,0 chr2 159519581 . G . PASS END=159519587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,69,255:19,0 chr2 159519588 . G . PASS END=159519588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:17,0 chr2 159519589 . C . PASS END=159519600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,659:0,41,255:19,0 chr2 159519784 . T . PASS END=159519785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 159519786 . G . PASS END=159519789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 159519790 . G . PASS END=159519790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 159519791 . G . PASS END=159519929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:35:0,81,1100:0,90,255:40,0 chr2 159519930 . C . PASS END=159519935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,89,255:26,0 chr2 159519936 . C . PASS END=159519936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 159519937 . C . PASS END=159519957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,74,255:25,0 chr2 159522925 . T . PASS END=159523089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:36:0,94,1455:0,94,255:40,2 chr2 159526232 . G . PASS END=159526237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr2 159526238 . A . PASS END=159526394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,1063:0,80,255:40,0 chr2 159526395 . G . PASS END=159526395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:32,0 chr2 159526396 . C . PASS END=159526398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1302:0,89,255:33,0 chr2 159526399 . G . PASS END=159526399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:31,0 chr2 159526400 . T . PASS END=159526421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1110:0,80,255:32,0 chr2 159526422 . C . PASS END=159526422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 159526423 . G . PASS END=159526423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 159526424 . A . PASS END=159526427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr2 159530189 . A . PASS END=159530273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,99,1485:0,110,255:40,0 chr2 159530395 . G . PASS END=159530512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:45:0,117,1755:0,135,255:40,0 chr2 159533251 . T . PASS END=159533364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:85:30:0,85,1096:0,85,255:40,0 chr2 159533365 . A . PASS END=159533369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,89,255:26,0 chr2 159533370 . C . PASS END=159533370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 159533371 . T . PASS END=159533379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:27:0,72,1080:0,81,255:26,0 chr2 159534711 . C . PASS END=159534713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 159534714 . A . PASS END=159534714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:29,0 chr2 159534715 . G . PASS END=159534720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 159534721 . T . PASS END=159534721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 159534722 . G . PASS END=159534743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1197:0,86,255:34,0 chr2 159534744 . C . PASS END=159534744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 159534745 . A . PASS END=159534792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:35:0,96,1404:0,104,255:40,0 chr2 159535093 . G . PASS END=159535166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,135,255:40,0 chr2 159536941 . C . PASS END=159537246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:94:35:0,94,1304:0,94,255:40,0 chr2 159651885 . A . PASS END=159651942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:35:0,82,1286:0,82,255:40,0 chr2 159660794 . T . PASS END=159660804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,173,255:40,0 chr2 159660805 . G T, 47.47 PASS DP=70;MQ=250.00;MQRankSum=7.082;ReadPosRankSum=2.575;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,29,0:0.414,0.000:70:22,14,0:19,15,0:46:82,0,50,1010,1450,2467:255,0,255:39,0:4.7471e+01,9.9403e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,17,22,7:21,20,17,12 chr2 159660806 . G . PASS END=159660869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:66:0,120,1800:0,182,255:40,0 chr2 159660870 . C T, 50.00 PASS DP=67;MQ=250.00;MQRankSum=6.964;ReadPosRankSum=4.330;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,35,0:0.530,0.000:66:16,19,0:15,16,0:48:85,0,50,1206,1093,2299:255,0,255:29,0:5.0000e+01,6.6527e-05,5.2719e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,20,15,20:16,15,19,16 chr2 159660871 . G . PASS END=159660881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:67:0,120,1800:0,149,255:40,0 chr2 159663567 . T . PASS END=159663598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,131,255:40,0 chr2 159663599 . T C, 49.16 PASS DP=51;MQ=250.00;MQRankSum=6.086;ReadPosRankSum=4.382;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,23,0:0.451,0.000:51:17,10,0:11,13,0:48:84,0,50,823,975,1798:255,0,255:24,0:4.9161e+01,7.4552e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,8,15:17,11,11,12 chr2 159663600 . G . PASS END=159663627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:39:0,99,1485:0,106,255:40,0 chr2 159672217 . C . PASS END=159672333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:37:0,104,1344:0,104,255:40,0 chr2 159682908 . G . PASS END=159682969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:54:0,110,1800:0,110,255:40,0 chr2 159682970 . C . PASS END=159682997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,99,1485:0,119,255:40,0 chr2 159682998 . A . PASS END=159682999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:72:46:0,72,1080:0,138,255:24,0 chr2 159851423 . A . PASS END=159851423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 159867950 . A . PASS END=159867952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,195,255:40,0 chr2 159899489 . G . PASS END=159899489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 159899913 . C . PASS END=159899913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1628:0,116,255:40,0 chr2 159910206 . T C, 200.03 PASS DP=52;MQ=250.00;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,27,0:0,24,0:150:238,153,0,1948,153,1948:255,156,0:0,0:2.0003e+02,1.5003e+02,0.0000e+00,4.5000e+02,1.8480e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,26:0,0,25,26 chr2 159916610 . A . PASS END=159916624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,223,255:40,0 chr2 159922408 . A . PASS END=159922483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:52:0,120,1800:0,139,255:40,0 chr2 159929431 . A . PASS END=159929431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1296:0,102,255:34,0 chr2 159932987 . C . PASS END=159933040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,109,1778:0,109,255:40,0 chr2 159936391 . C . PASS END=159936391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 159946332 . A . PASS END=159946458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,104,1443:0,104,255:40,0 chr2 159950865 . C . PASS END=159950865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 159954149 . G . PASS END=159954155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 159954156 . C . PASS END=159954157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 159954158 . T . PASS END=159954158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 159954159 . T . PASS END=159954161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 159954162 . T . PASS END=159954162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,627:0,5,255:18,0 chr2 159954163 . C . PASS END=159954170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:25,0 chr2 159954171 . T . PASS END=159954172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,831:0,36,255:24,0 chr2 159954173 . C . PASS END=159954174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 159954175 . C T, 50.02 PASS DP=26;MQ=250.00;MQRankSum=4.215;ReadPosRankSum=1.006;FractionInformativeReads=0.962;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,12,0:0.480,0.000:25:4,6,0:9,6,0:48:85,0,50,421,378,800:255,0,255:13,0:5.0017e+01,6.4974e-05,5.3000e+01,4.2110e+02,4.1323e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,4,5,7:6,7,7,5 chr2 159954176 . C . PASS END=159954190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 159954191 . A . PASS END=159954212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1219:0,87,255:35,0 chr2 159954213 . G . PASS END=159954346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1172:0,81,255:40,0 chr2 159992705 . G . PASS END=159992809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:41:0,88,1421:0,88,255:40,0 chr2 160005653 . A . PASS END=160005783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:94:36:0,94,1272:0,94,255:40,0 chr2 160006881 . T . PASS END=160006881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 160006882 . G . PASS END=160007053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:29:0,81,1215:0,83,255:40,0 chr2 160007054 . C . PASS END=160007067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,986:0,70,255:26,0 chr2 160019794 . C . PASS END=160019809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,713:0,57,255:19,0 chr2 160019810 . A . PASS END=160019825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:22,0 chr2 160019826 . C . PASS END=160019842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,848:0,66,255:25,0 chr2 160019843 . G . PASS END=160019843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 160019844 . G . PASS END=160019862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,939:0,75,255:25,0 chr2 160019863 . A G, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,15,0:0,10,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,10:0,0,13,12 chr2 160019864 . C . PASS END=160019900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,66,255:24,0 chr2 160019901 . C . PASS END=160019903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 160019904 . A . PASS END=160019904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 160019905 . G . PASS END=160019926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,884:0,61,255:26,0 chr2 160019927 . G . PASS END=160019934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160019935 . A . PASS END=160019935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 160019936 . G . PASS END=160019961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr2 160019962 . C . PASS END=160019965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 160019966 . G . PASS END=160019967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 160019968 . C . PASS END=160019968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 160019969 . C . PASS END=160019975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 160019976 . G . PASS END=160019984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 160019985 . G . PASS END=160019988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 160019989 . G . PASS END=160019989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 160019990 . A . PASS END=160019992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 160019993 . T . PASS END=160019994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 160019995 . G . PASS END=160019997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 160019998 . C . PASS END=160019998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 160019999 . A . PASS END=160020016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 160020017 . C . PASS END=160020017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 160020018 . T . PASS END=160020018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 160020019 . C . PASS END=160020048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,47,255:19,0 chr2 160020049 . C . PASS END=160020057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,533:0,32,255:12,0 chr2 160025761 . C . PASS END=160025883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:37:0,90,1396:0,90,255:40,0 chr2 160027035 . C . PASS END=160027037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr2 160027038 . G . PASS END=160027047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,801:0,63,255:25,0 chr2 160027048 . C . PASS END=160027061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1094:0,84,255:32,0 chr2 160027062 . A . PASS END=160027062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:30,0 chr2 160027063 . C . PASS END=160027281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1151:0,80,255:40,0 chr2 160027282 . G . PASS END=160027282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:29,0 chr2 160027283 . A . PASS END=160027298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:31,0 chr2 160027299 . C . PASS END=160027299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 160027300 . G . PASS END=160027303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr2 160027304 . T . PASS END=160027304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 160027305 . C . PASS END=160027305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160027306 . A . PASS END=160027307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr2 160027308 . C . PASS END=160027316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:28:0,48,720:0,84,255:18,0 chr2 160028632 . C . PASS END=160028641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,800:0,66,255:26,0 chr2 160028642 . C . PASS END=160028656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:31,0 chr2 160028657 . T . PASS END=160028657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1108:0,63,255:30,0 chr2 160028658 . T . PASS END=160028760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:82:30:0,82,1117:0,82,255:40,0 chr2 160028761 . C . PASS END=160028773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,74,255:24,0 chr2 160028774 . T . PASS END=160028783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,50,255:17,0 chr2 160031464 . G . PASS END=160031464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 160031465 . T . PASS END=160031465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 160031466 . G . PASS END=160031474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,900:0,65,255:26,0 chr2 160031475 . C . PASS END=160031478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160031479 . T . PASS END=160031479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 160031480 . A . PASS END=160031583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1016:0,81,255:35,0 chr2 160031584 . C . PASS END=160031584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 160031585 . T . PASS END=160031594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 160031595 . G . PASS END=160031618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,931:0,64,255:25,0 chr2 160031619 . C . PASS END=160031619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 160031620 . C . PASS END=160031632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:23,0 chr2 160031633 . T . PASS END=160031633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:21,0 chr2 160031634 . G . PASS END=160031660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr2 160031661 . G . PASS END=160031662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 160031663 . G . PASS END=160031664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160031665 . G . PASS END=160031665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,717:0,38,255:19,0 chr2 160031666 . T . PASS END=160031675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:21,0 chr2 160031676 . A . PASS END=160031694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:19,0 chr2 160031695 . G . PASS END=160031695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:13,0 chr2 160032863 . A . PASS END=160033029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,117,1643:0,119,255:40,0 chr2 160035067 . G . PASS END=160035069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,648:0,63,255:21,0 chr2 160035070 . A . PASS END=160035070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 160035071 . T . PASS END=160035073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,717:0,63,255:22,0 chr2 160035074 . T . PASS END=160035074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 160035075 . A . PASS END=160035079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 160035080 . C . PASS END=160035080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:20,0 chr2 160035081 . G . PASS END=160035081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 160035082 . C . PASS END=160035082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:20,0 chr2 160035083 . T . PASS END=160035084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 160035085 . C . PASS END=160035085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 160035086 . C . PASS END=160035099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,793:0,66,255:24,0 chr2 160035100 . T . PASS END=160035100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,807:0,33,255:23,0 chr2 160035101 . C . PASS END=160035101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 160035102 . C . PASS END=160035106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr2 160035107 . A . PASS END=160035107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,784:0,45,255:24,0 chr2 160035108 . T . PASS END=160035117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:25,0 chr2 160035118 . G . PASS END=160035118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr2 160035119 . A . PASS END=160035126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,898:0,62,255:26,0 chr2 160035127 . G . PASS END=160035128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:45:26:0,45,837:0,45,255:23,0 chr2 160035129 . C . PASS END=160035132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 160035133 . C . PASS END=160035133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160035134 . A . PASS END=160035134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 160035135 . C . PASS END=160035135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160035136 . A . PASS END=160035153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,961:0,65,255:27,0 chr2 160035154 . G . PASS END=160035156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160035157 . C . PASS END=160035157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160035158 . A . PASS END=160035170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:24,0 chr2 160035171 . C . PASS END=160035175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:50:22:0,50,782:0,50,255:19,0 chr2 160035176 . G . PASS END=160035194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 160035195 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:7,4,0:6,9,0:48:85,0,50,399,457,856:255,0,255:12,0:5.0000e+01,6.5233e-05,5.3000e+01,3.9933e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,5,8:7,6,6,7 chr2 160035196 . A . PASS END=160035202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:24,0 chr2 160035203 . T . PASS END=160035203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:23,0 chr2 160035204 . G . PASS END=160035206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 160035207 . T C, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,11,0:0,14,0:72:160,75,0,939,75,939:255,75,0:0,0:1.2178e+02,7.1777e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,12:0,0,13,12 chr2 160035208 . G . PASS END=160035232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,870:0,72,255:26,0 chr2 160035233 . G . PASS END=160035237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 160035238 . G . PASS END=160035245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,915:0,64,255:26,0 chr2 160035246 . C . PASS END=160035255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,962:0,67,255:26,0 chr2 160035256 . C . PASS END=160035265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 160035266 . T . PASS END=160035268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 160035269 . G . PASS END=160035273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1125:0,80,255:29,0 chr2 160035274 . T . PASS END=160035275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,1049:0,76,255:28,0 chr2 160035276 . C . PASS END=160035277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 160035278 . T . PASS END=160035278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,955:0,32,255:26,0 chr2 160035279 . G . PASS END=160035279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:26,0 chr2 160035280 . T . PASS END=160035283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr2 160035284 . T . PASS END=160035284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1069:0,60,255:26,0 chr2 160035285 . C . PASS END=160035287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 160035288 . G . PASS END=160035289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1011:0,74,255:27,0 chr2 160035290 . T . PASS END=160035296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 160035297 . G . PASS END=160035302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:29:0,60,948:0,60,255:26,0 chr2 160035303 . T . PASS END=160035303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:27,0 chr2 160035304 . T . PASS END=160035305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1084:0,74,255:27,0 chr2 160035306 . C . PASS END=160035306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 160035307 . C . PASS END=160035307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:27,0 chr2 160035308 . A . PASS END=160035308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 160035309 . G . PASS END=160035310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 160035311 . G . PASS END=160035311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:25,0 chr2 160035312 . G . PASS END=160035327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,945:0,62,255:25,0 chr2 160035328 . A . PASS END=160035328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,878:0,29,255:23,0 chr2 160035329 . A . PASS END=160035345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:26,0 chr2 160035346 . G . PASS END=160035353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr2 160035354 . C . PASS END=160035371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,939:0,67,255:27,0 chr2 160035372 . C . PASS END=160035372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160035373 . T . PASS END=160035374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 160035375 . T . PASS END=160035375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160035376 . T . PASS END=160035376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 160035377 . T . PASS END=160035378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160035379 . C . PASS END=160035379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 160035380 . T . PASS END=160035381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 160035382 . C . PASS END=160035382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 160035383 . A . PASS END=160035383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 160035384 . G . PASS END=160035384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 160035385 . T . PASS END=160035385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 160035386 . G . PASS END=160035389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr2 160035390 . C . PASS END=160035393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160035394 . A . PASS END=160035422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,893:0,61,255:26,0 chr2 160035423 . G . PASS END=160035423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,892:0,12,255:23,0 chr2 160035424 . G . PASS END=160035427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 160035428 . T . PASS END=160035429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160035430 . C . PASS END=160035433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 160035434 . T . PASS END=160035434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,946:0,53,255:26,0 chr2 160035435 . T . PASS END=160035455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1022:0,68,255:26,0 chr2 160035456 . C . PASS END=160035458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 160035459 . C . PASS END=160035461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1086:0,77,255:26,0 chr2 160035462 . C . PASS END=160035480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1125:0,90,255:31,0 chr2 160035481 . A . PASS END=160035481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr2 160035482 . T . PASS END=160035500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:34,0 chr2 160035501 . T . PASS END=160035501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:33,0 chr2 160035502 . G . PASS END=160035517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:34:0,96,1318:0,102,255:36,0 chr2 160035518 . A . PASS END=160035520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:76:38:0,76,1372:0,76,255:36,0 chr2 160035521 . A . PASS END=160035600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:34:0,89,1279:0,89,255:38,0 chr2 160035601 . T . PASS END=160035601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr2 160035602 . G . PASS END=160035642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:37,0 chr2 160035643 . G . PASS END=160035643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 160035644 . G . PASS END=160035645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 160035646 . G . PASS END=160035674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:25,0 chr2 160042302 . G . PASS END=160042374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1097:0,80,255:34,0 chr2 160042375 . C . PASS END=160042378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 160042379 . G . PASS END=160042379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160042380 . C . PASS END=160042385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,68,255:26,0 chr2 160042386 . C . PASS END=160042386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:20,0 chr2 160042387 . A . PASS END=160042392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:21,0 chr2 160042393 . A . PASS END=160042407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 160042408 . A . PASS END=160042410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:18,0 chr2 160043413 . G . PASS END=160043420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 160043421 . T . PASS END=160043451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,850:0,75,255:26,0 chr2 160043452 . C . PASS END=160043458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 160043459 . T . PASS END=160043507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,709:0,63,255:26,0 chr2 160043508 . C . PASS END=160043519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,43,255:19,0 chr2 160043520 . T . PASS END=160043521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 160043522 . C . PASS END=160043522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 160043523 . T . PASS END=160043523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 160043524 . C . PASS END=160043525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 160043526 . C . PASS END=160043534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,460:0,31,255:12,0 chr2 160043535 . G . PASS END=160043535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:11,0 chr2 160050768 . G . PASS END=160050780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr2 160050781 . T . PASS END=160050781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 160050782 . G . PASS END=160050796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1210:0,93,255:36,0 chr2 160050797 . C . PASS END=160050797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:36,0 chr2 160050798 . A . PASS END=160050798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:35,0 chr2 160050799 . A . PASS END=160050799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1389:0,114,255:38,0 chr2 160050800 . C . PASS END=160050801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1267:0,75,255:37,0 chr2 160050802 . T . PASS END=160050887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1177:0,80,255:40,0 chr2 160050888 . C . PASS END=160050902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1015:0,71,255:26,0 chr2 160050903 . T . PASS END=160050909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 160050910 . A . PASS END=160050910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 160050911 . C . PASS END=160050937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1056:0,84,255:32,0 chr2 160050938 . C . PASS END=160050969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr2 160050970 . A . PASS END=160050999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 160051000 . T . PASS END=160051004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 160053119 . G . PASS END=160053125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 160053126 . A . PASS END=160053126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 160053127 . C . PASS END=160053144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,824:0,63,255:26,0 chr2 160053145 . G . PASS END=160053148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 160053149 . G . PASS END=160053151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 160053152 . C . PASS END=160053203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1133:0,83,255:33,0 chr2 160053204 . C . PASS END=160053204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 160053205 . T . PASS END=160053211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 160053212 . T . PASS END=160053213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 160053214 . G . PASS END=160053216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160053217 . G . PASS END=160053221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 160053222 . G . PASS END=160053224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160053225 . C . PASS END=160053258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,745:0,60,255:26,0 chr2 160053259 . C . PASS END=160053281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr2 160053282 . C . PASS END=160053304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr2 160055486 . G . PASS END=160055564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:32:0,87,1235:0,88,255:40,0 chr2 160074008 . C . PASS END=160074014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,807:0,69,255:23,0 chr2 160074015 . T . PASS END=160074015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 160074016 . G . PASS END=160074017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 160074018 . C . PASS END=160074018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 160074019 . G . PASS END=160074029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 160074030 . A . PASS END=160074030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:23,0 chr2 160074031 . G . PASS END=160074049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,917:0,64,255:26,0 chr2 160074050 . A . PASS END=160074103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1041:0,84,255:33,0 chr2 160074104 . C . PASS END=160074136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:23,0 chr2 160074137 . G . PASS END=160074137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 160074138 . G . PASS END=160074141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 160075749 . A . PASS END=160075749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,697:0,57,255:19,0 chr2 160075750 . T . PASS END=160075773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,792:0,66,255:26,0 chr2 160075774 . G . PASS END=160075808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:31,0 chr2 160075809 . A . PASS END=160075811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1099:0,58,255:31,0 chr2 160075812 . C . PASS END=160075813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 160075814 . C . PASS END=160075834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,86,255:32,0 chr2 160075835 . A . PASS END=160075835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr2 160075836 . G . PASS END=160075836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 160075837 . G . PASS END=160075840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 160075841 . C . PASS END=160075843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr2 160075844 . G . PASS END=160075846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 160075847 . C . PASS END=160075847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 160075848 . A . PASS END=160075865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,83,255:28,0 chr2 160075866 . T . PASS END=160075877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:34:0,60,900:0,102,255:25,0 chr2 160075878 . A . PASS END=160075884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:42:33:0,42,630:0,99,255:19,0 chr2 160075885 . T . PASS END=160075885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:39:34:0,39,585:0,102,255:13,0 chr2 160075886 . G GC, 49.36 PASS DP=34;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=0.060;FractionInformativeReads=0.912;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,14,0:0.452,0.000:31:9,8,0:8,6,0:48:78,0,50,435,527,962:255,0,255:13,20:4.9362e+01,7.1964e-05,5.3000e+01,4.4075e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:8,9,10,4:10,7,8,6 chr2 160075887 . C . LowGQ END=160075887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,13:35:0:35:0,0,312:255,0,255:26,0 chr2 160075888 . C . PASS END=160075888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:26,0 chr2 160075889 . C . PASS END=160075889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:27,0 chr2 160075890 . T . PASS END=160075890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:27,0 chr2 160075891 . C . PASS END=160075891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:27,0 chr2 160075892 . A . PASS END=160075904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1141:0,82,255:30,0 chr2 160075905 . G . PASS END=160075905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 160075906 . G . PASS END=160075911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 160075912 . C . PASS END=160075922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 160075923 . C . PASS END=160075923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 160075924 . T . PASS END=160075925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 160075926 . C . PASS END=160075929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 160075930 . A . PASS END=160075988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1118:0,85,255:34,0 chr2 160075989 . A . PASS END=160076020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1109:0,80,255:33,0 chr2 160076021 . C . PASS END=160076025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,77,255:26,0 chr2 160076026 . C G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=3.277;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:7,7,0:8,8,0:48:85,0,50,536,533,1069:255,0,255:11,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,9,7,8:10,5,11,4 chr2 160076027 . T . PASS END=160076051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr2 160076203 . G . PASS END=160076356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1019:0,80,255:40,0 chr2 160076357 . C . PASS END=160076364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,83,255:26,0 chr2 160076365 . G . PASS END=160076365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:25,0 chr2 160076366 . C . PASS END=160076372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,74,255:26,0 chr2 160076373 . G . PASS END=160076374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 160076375 . G . PASS END=160076376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 160076377 . C . PASS END=160076377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:24,0 chr2 160076378 . T . PASS END=160076378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 160080743 . G . PASS END=160080744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:25,0 chr2 160080745 . G . PASS END=160080778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1122:0,83,255:33,0 chr2 160080779 . C . PASS END=160080779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:32,0 chr2 160080780 . A . PASS END=160080834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1255:0,86,255:39,0 chr2 160080835 . A . PASS END=160080861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr2 160080862 . G . PASS END=160080862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 160080863 . G . PASS END=160080869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 160080870 . A . PASS END=160080870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 160080871 . G . PASS END=160080872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 160080873 . T . PASS END=160080875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,855:0,56,255:19,0 chr2 160082199 . G . PASS END=160082290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,145,255:40,0 chr2 160084330 . A . PASS END=160084330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:24,0 chr2 160084331 . A . PASS END=160084333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 160084334 . G . PASS END=160084335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 160084336 . A . PASS END=160084336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 160084337 . A . PASS END=160084339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr2 160084340 . T . PASS END=160084342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:27,0 chr2 160084343 . A . PASS END=160084345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 160084346 . A . PASS END=160084346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 160084347 . G . PASS END=160084347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160084348 . G . PASS END=160084348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 160084349 . C . PASS END=160084349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160084350 . A . PASS END=160084350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 160084351 . G . PASS END=160084435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1165:0,84,255:38,0 chr2 160084436 . C . PASS END=160084436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:28,0 chr2 160084437 . C . PASS END=160084437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1072:0,44,255:27,0 chr2 160084438 . C . PASS END=160084438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1062:0,66,255:27,0 chr2 160084439 . T . PASS END=160084439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 160084440 . C . PASS END=160084440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 160084441 . T . PASS END=160084467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1011:0,87,255:30,0 chr2 160084468 . A . PASS END=160084468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 160084469 . A . PASS END=160084470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 160084471 . A . PASS END=160084472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 160084473 . A C, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.646;ReadPosRankSum=1.991;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,15,0:0.500,0.000:30:10,6,0:5,9,0:48:85,0,50,492,528,1020:255,0,255:10,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,10,6,9:6,9,7,8 chr2 160084474 . A . PASS END=160084476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 160085307 . G . PASS END=160085412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:64:0,120,1800:0,175,255:40,0 chr2 160086089 . G . PASS END=160086102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,466:0,39,255:13,0 chr2 160086103 . C . PASS END=160086105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr2 160086106 . T . PASS END=160086106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 160086107 . G . PASS END=160086128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr2 160086129 . A . PASS END=160086129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 160086130 . A . PASS END=160086130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 160086131 . A . PASS END=160086150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 160086151 . A . PASS END=160086152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 160086153 . G . PASS END=160086156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 160086157 . A . PASS END=160086160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 160086161 . G . PASS END=160086169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 160086170 . C . PASS END=160086171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 160086172 . G . PASS END=160086172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 160086173 . C . PASS END=160086173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr2 160086174 . G . PASS END=160086180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 160086181 . A . PASS END=160086181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 160086182 . G . PASS END=160086183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,845:0,66,255:22,0 chr2 160086184 . A . PASS END=160086184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 160086185 . G . PASS END=160086193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:22,0 chr2 160086194 . A . PASS END=160086194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 160086195 . C . PASS END=160086205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr2 160086206 . T . PASS END=160086206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 160086207 . C . PASS END=160086211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 160086212 . G . PASS END=160086212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 160086213 . C . PASS END=160086220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 160086221 . G . PASS END=160086221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,668:0,33,255:19,0 chr2 160086222 . C . PASS END=160086229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,878:0,66,255:24,0 chr2 160086230 . G . PASS END=160086230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 160086231 . C . PASS END=160086237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,860:0,62,255:26,0 chr2 160086238 . C . PASS END=160086238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 160086239 . T . PASS END=160086239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 160086240 . C . PASS END=160086243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1017:0,84,255:29,0 chr2 160086244 . T . PASS END=160086244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,878:0,54,255:27,0 chr2 160086245 . C . PASS END=160086246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 160086247 . A . PASS END=160086247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,938:0,70,255:28,0 chr2 160086248 . C . PASS END=160086257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 160086258 . A . PASS END=160086258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,942:0,59,255:27,0 chr2 160086259 . A . PASS END=160086261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 160086262 . A . PASS END=160086262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 160086263 . A . PASS END=160086267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 160086268 . A . PASS END=160086270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1170:0,79,255:26,0 chr2 160086271 . C . PASS END=160086281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1073:0,82,255:29,0 chr2 160086282 . G . PASS END=160086282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 160086283 . G . PASS END=160086284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 160086285 . T . PASS END=160086285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 160086286 . T . PASS END=160086289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 160086290 . T . PASS END=160086290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:26,0 chr2 160086291 . G . PASS END=160086292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 160086293 . C . PASS END=160086295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,1002:0,70,255:25,0 chr2 160086296 . C . PASS END=160086297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 160086298 . T . PASS END=160086298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 160086299 . T . PASS END=160086300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 160086301 . A . PASS END=160086303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1039:0,60,255:26,0 chr2 160086304 . C . PASS END=160086305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 160086306 . G . PASS END=160086309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,1086:0,60,255:26,0 chr2 160086310 . A . PASS END=160086310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr2 160086311 . G . PASS END=160086313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1015:0,68,255:25,0 chr2 160086314 . T . PASS END=160086314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr2 160086315 . G . PASS END=160086322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr2 160086323 . A . PASS END=160086323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:24,0 chr2 160086324 . G . PASS END=160086336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr2 160086337 . A . PASS END=160086337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,907:0,42,255:25,0 chr2 160086338 . G . PASS END=160086349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:26,0 chr2 160086350 . T . PASS END=160086360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 160086361 . C . PASS END=160086398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,62,255:26,0 chr2 160086399 . A . PASS END=160086412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,53,255:19,0 chr2 160086413 . A . PASS END=160086413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,553:0,27,255:16,0 chr2 160086414 . G . PASS END=160086438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,652:0,54,255:18,0 chr2 160086439 . C . PASS END=160086439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 160086440 . G . PASS END=160086441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 160086442 . T . PASS END=160086442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:15,0 chr2 160086443 . A . PASS END=160086446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:16,0 chr2 160086447 . C . PASS END=160086464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr2 160086465 . A . PASS END=160086466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 160086467 . C . PASS END=160086470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 160086471 . A . PASS END=160086472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 160086473 . G . PASS END=160086494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,421:0,39,255:13,0 chr2 160086495 . C . PASS END=160086495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:11,0 chr2 160086496 . A . PASS END=160086496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 160086497 . G . PASS END=160086497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 160086498 . C . PASS END=160086500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 160086501 . G . PASS END=160086501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 160086502 . G . PASS END=160086507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 160086508 . T . PASS END=160086509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 160086510 . C . PASS END=160086510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 160086511 . T . PASS END=160086516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:15:0,34,582:0,34,255:13,0 chr2 160086517 . C . PASS END=160086531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,676:0,51,255:18,0 chr2 160086532 . A . PASS END=160086532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 160086533 . G . PASS END=160086533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 160086534 . A . PASS END=160086534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 160086535 . T . PASS END=160086554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,605:0,40,255:19,0 chr2 160086555 . C . PASS END=160086555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr2 160086556 . T . PASS END=160086556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 160086557 . G . PASS END=160086557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr2 160086558 . G . PASS END=160086561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 160086562 . C . PASS END=160086562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:15,0 chr2 160086563 . T . PASS END=160086608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,607:0,51,255:19,0 chr2 160086609 . T . PASS END=160086610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 160086611 . T . PASS END=160086616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,782:0,50,255:19,0 chr2 160086617 . C . PASS END=160086618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 160086619 . C . PASS END=160086637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,49,255:19,0 chr2 160086638 . A . PASS END=160086638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 160086639 . G . PASS END=160086644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 160086645 . A . PASS END=160086645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr2 160086646 . T . PASS END=160086652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,607:0,51,255:17,0 chr2 160086653 . C T, 46.76 PASS DP=17;MQ=250.00;MQRankSum=3.266;ReadPosRankSum=2.362;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:11,6,0:0.353,0.000:17:5,3,0:6,3,0:45:82,0,47,182,182,182:181,0,255:11,0:4.6758e+01,1.3513e-04,5.0000e+01,1.8153e+02,2.1630e+02,1.8454e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,8,3,3:5,6,4,2:160086653 chr2 160086654 . A G, 46.76 PASS DP=17;MQ=250.00;MQRankSum=3.266;ReadPosRankSum=2.362;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:11,6,0:0.353,0.000:17:5,3,0:6,3,0:45:82,0,47,182,182,182:159,0,255:11,0:4.6758e+01,1.3513e-04,5.0000e+01,1.8153e+02,2.1630e+02,1.8454e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,8,3,3:5,6,4,2:160086653 chr2 160086655 . C . PASS END=160086691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,613:0,44,255:19,0 chr2 160086692 . A G, 49.57 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=0.456;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,9,0:0.450,0.000:20:8,3,0:3,6,0:48:84,0,50,314,393,707:255,0,255:11,0:4.9565e+01,6.9634e-05,5.3000e+01,3.1381e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,5,5,4:7,4,7,2 chr2 160086693 . G . PASS END=160086695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 160086696 . A . PASS END=160086705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:20,0 chr2 160086706 . C . PASS END=160086709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 160086710 . A . PASS END=160086717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:23,0 chr2 160086718 . G . PASS END=160086718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 160086719 . T . PASS END=160086721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 160086722 . C . PASS END=160086722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 160086723 . C . PASS END=160086724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 160086725 . C . PASS END=160086725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 160086726 . T . PASS END=160086726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 160086727 . T . PASS END=160086727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 160086728 . T . PASS END=160086729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 160086730 . G . PASS END=160086730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 160086731 . G . PASS END=160086744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,837:0,66,255:22,0 chr2 160086745 . C . PASS END=160086745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 160086746 . C . PASS END=160086747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,782:0,63,255:21,0 chr2 160086748 . G . PASS END=160086748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 160086749 . C . PASS END=160086754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,701:0,63,255:21,0 chr2 160086755 . T . PASS END=160086755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 160086756 . G . PASS END=160086774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,754:0,63,255:23,0 chr2 160086775 . A . PASS END=160086775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 160086776 . G . PASS END=160086784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,801:0,69,255:24,0 chr2 160086785 . T . PASS END=160086785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 160086786 . G . PASS END=160086793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 160086794 . T . PASS END=160086794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,679:0,41,255:21,0 chr2 160086795 . T . PASS END=160086801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr2 160086802 . G . PASS END=160086803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,701:0,52,255:21,0 chr2 160086804 . A . PASS END=160086805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160086806 . G . PASS END=160086806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:19,0 chr2 160086807 . A . PASS END=160086807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160086808 . C . PASS END=160086809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:19,0 chr2 160086810 . A . PASS END=160086813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160086814 . C . PASS END=160086827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,619:0,40,255:19,0 chr2 160086828 . C . PASS END=160086828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:15,0 chr2 160086829 . T . PASS END=160086837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 160086838 . C . PASS END=160086838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 160086839 . C . PASS END=160086843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 160086844 . T . PASS END=160086845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 160086846 . G . PASS END=160086846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 160086847 . C . PASS END=160086847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 160086848 . T . PASS END=160086848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 160086849 . G . PASS END=160086849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 160086850 . T . PASS END=160086851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 160086852 . G . PASS END=160086852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 160086853 . A . PASS END=160086853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:13,0 chr2 160086854 . C . PASS END=160086857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:16:0,40,621:0,40,255:14,0 chr2 160086858 . G . PASS END=160086861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:13,0 chr2 160086862 . C . PASS END=160086863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 160086864 . C . PASS END=160086864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 160086865 . C . PASS END=160086869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:16,0 chr2 160086870 . C . PASS END=160086871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,574:0,34,255:14,0 chr2 160086872 . A . PASS END=160086873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 160086874 . G . PASS END=160086874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 160086875 . T . PASS END=160086882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,604:0,48,255:16,0 chr2 160086883 . C . PASS END=160086883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 160086884 . G . PASS END=160086885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr2 160086886 . C . PASS END=160086886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 160086887 . C . PASS END=160086889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 160086890 . C . PASS END=160086890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 160086891 . A . PASS END=160086891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,494:0,15,255:14,0 chr2 160086892 . G . PASS END=160086909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,590:0,41,255:18,0 chr2 160086910 . C . PASS END=160086910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:16,0 chr2 160086911 . T . PASS END=160086915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,651:0,41,255:18,0 chr2 160086916 . T . PASS END=160086916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr2 160086917 . C . PASS END=160086942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:20,0 chr2 160086943 . C . PASS END=160086944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 160086945 . T . PASS END=160086945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,676:0,22,255:20,0 chr2 160086946 . C . PASS END=160086947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 160086948 . A . PASS END=160086948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 160086949 . G . PASS END=160086949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:20,0 chr2 160086950 . C . PASS END=160086951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 160086952 . G . PASS END=160086952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,749:0,22,255:20,0 chr2 160086953 . C . PASS END=160086955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 160086956 . A . PASS END=160086956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:21,0 chr2 160086957 . A . PASS END=160086959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 160086960 . A . PASS END=160086960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,819:0,39,255:24,0 chr2 160086961 . T . PASS END=160086961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 160086962 . G . PASS END=160086968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,842:0,64,255:27,0 chr2 160086969 . T . PASS END=160086971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:29,0 chr2 160086972 . A . PASS END=160086972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,875:0,70,255:28,0 chr2 160086973 . C . PASS END=160086973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 160086974 . C . PASS END=160086976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:30,0 chr2 160086977 . T . PASS END=160086979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1097:0,83,255:32,0 chr2 160086980 . T . PASS END=160086980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,987:0,66,255:31,0 chr2 160086981 . T . PASS END=160087014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1141:0,82,255:34,0 chr2 160087015 . A . PASS END=160087015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1105:0,60,255:29,0 chr2 160087016 . G . PASS END=160087080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1164:0,83,255:34,0 chr2 160087081 . A . PASS END=160087081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1257:0,56,255:30,0 chr2 160087082 . G . PASS END=160087083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:32,0 chr2 160087084 . A . PASS END=160087103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1305:0,95,255:34,0 chr2 160087104 . T . PASS END=160087104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1094:0,69,255:26,0 chr2 160087105 . T . PASS END=160087108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 160087109 . G . PASS END=160087109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:27,0 chr2 160087110 . G . PASS END=160087114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 160087115 . C . PASS END=160087117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:27,0 chr2 160087118 . G . PASS END=160087120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 160087121 . T . PASS END=160087121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 160087122 . A . PASS END=160087125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 160087126 . C . PASS END=160087126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 160087127 . T . PASS END=160087128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160087129 . C . PASS END=160087129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 160087130 . G . PASS END=160087132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160087133 . G . PASS END=160087171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,917:0,62,255:26,0 chr2 160087172 . C . PASS END=160087187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 160087188 . G . PASS END=160087188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 160087189 . G . PASS END=160087208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 160087209 . T . PASS END=160087248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,64,255:26,0 chr2 160087249 . C . PASS END=160087255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 160087256 . G . PASS END=160087256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 160087257 . C . PASS END=160087497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1227:0,89,255:40,0 chr2 160087498 . G . PASS END=160087520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:37:0,87,1466:0,87,255:40,0 chr2 160087521 . T . PASS END=160087523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 160092544 . T . PASS END=160092546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 160092547 . C . PASS END=160092547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:27,0 chr2 160092548 . T . PASS END=160092548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr2 160092549 . T . PASS END=160092549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 160092550 . T . PASS END=160092550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1084:0,87,255:29,0 chr2 160092551 . T . PASS END=160092551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 160092552 . G . PASS END=160092553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 160092554 . T . PASS END=160092554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 160092555 . G . PASS END=160092555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 160092556 . T . PASS END=160092556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 160092557 . G . PASS END=160092660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:84:34:0,84,1274:0,84,255:40,0 chr2 160092661 . G . PASS END=160092701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,149,255:40,0 chr2 160104883 . C . PASS END=160105011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:49:0,81,1215:0,147,255:40,0 chr2 160105012 . G . PASS END=160105023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:66:31:0,66,990:0,76,255:26,0 chr2 160112707 . C . PASS END=160112843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:58:0,120,1800:0,146,255:40,0 chr2 160112844 . C . PASS END=160112880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:50:0,114,1710:0,140,255:40,0 chr2 160112881 . G T, 50.00 PASS DP=46;MQ=250.00;MQRankSum=5.794;ReadPosRankSum=1.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,24,0:0.522,0.000:46:10,11,0:12,13,0:48:85,0,50,792,754,1545:255,0,255:18,0:5.0000e+01,6.5751e-05,5.2871e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,9,15:16,6,12,12 chr2 160112882 . C . PASS END=160112886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,113,255:37,0 chr2 160114269 . C . PASS END=160114375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:64:0,120,1800:0,175,255:40,0 chr2 160114456 . C . PASS END=160114474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:87:0,120,1800:0,240,255:40,0 chr2 160114475 . T . PASS END=160114496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:68:0,120,1800:0,191,255:40,0 chr2 160116321 . A . PASS END=160116354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,151,255:40,0 chr2 160128213 . C . PASS END=160128306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:35:0,92,1288:0,92,255:40,0 chr2 160132057 . C . PASS END=160132149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:65:0,120,1800:0,160,255:40,0 chr2 160136272 . C . PASS END=160136299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1288:0,84,255:38,0 chr2 160136300 . G . PASS END=160136336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,106,1541:0,106,255:40,0 chr2 160136337 . G A, 185.44 PASS DP=47;MQ=250.00;FractionInformativeReads=0.979 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,22,0:0,24,0:135:223,138,0,1760,138,1760:255,141,0:0,0:1.8544e+02,1.3544e+02,0.0000e+00,4.5000e+02,1.7021e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,25:0,0,25,21 chr2 160136338 . G . PASS END=160136374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,125,255:40,0 chr2 160136375 . A . PASS END=160136456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1209:0,86,255:40,0 chr2 160139183 . C . PASS END=160139208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr2 160139209 . C . PASS END=160139226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,610:0,60,255:21,0 chr2 160139227 . A . PASS END=160139227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 160139228 . T . PASS END=160139232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 160139233 . T . PASS END=160139233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 160139234 . G . PASS END=160139290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,854:0,61,255:26,0 chr2 160139291 . C . PASS END=160139299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 160139300 . T . PASS END=160139300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 160139301 . G . PASS END=160139308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr2 160139309 . A . PASS END=160139309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 160139310 . C . PASS END=160139329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 160139330 . T . PASS END=160139342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:74:27:0,74,1039:0,74,255:26,0 chr2 160139343 . G . PASS END=160139552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:29:0,80,1109:0,80,255:40,0 chr2 160139553 . C . PASS END=160139558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr2 160139559 . A . PASS END=160139564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:54:27:0,54,810:0,81,255:19,0 chr2 160139565 . G . PASS END=160139566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 160139567 . A . PASS END=160139580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,681:0,41,255:18,0 chr2 160171993 . C . PASS END=160172010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1133:0,82,255:39,0 chr2 160172011 . A . PASS END=160172047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,114,1474:0,117,255:40,0 chr2 160172048 . T C, 50.00 PASS DP=46;MQ=249.75;MQRankSum=5.295;ReadPosRankSum=4.130;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,23,0:0.500,0.000:46:9,14,0:14,9,0:48:85,0,50,794,823,1617:255,0,255:17,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,7,16:9,14,10,13 chr2 160172049 . A . PASS END=160172070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,96,255:37,0 chr2 160172071 . C . PASS END=160172081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:25,0 chr2 160172082 . A G, 128.26 PASS DP=27;MQ=249.57;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,13,0:0,14,0:78:166,81,0,1046,81,1046:255,81,0:0,0:1.2826e+02,7.8262e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,14:0,0,13,14 chr2 160172083 . T . PASS END=160172085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 160176776 . T . PASS END=160176905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:39:0,96,1366:0,96,255:40,0 chr2 160176906 . G . PASS END=160176929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:36:0,91,1303:0,91,255:40,0 chr2 160181322 . T . PASS END=160181465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:49:0,102,1530:0,131,255:40,0 chr2 160182164 . C . PASS END=160182264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:35:0,102,1096:0,105,255:40,0 chr2 160182265 . T . PASS END=160182301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:68:0,120,1800:0,188,255:40,0 chr2 160182302 . C T, 47.48 PASS DP=68;MQ=250.00;MQRankSum=6.972;ReadPosRankSum=5.776;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,28,0:0.412,0.000:68:19,14,0:21,14,0:46:82,0,50,1001,1364,2365:255,0,255:35,0:4.7476e+01,9.9403e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,21,10,18:16,24,16,12 chr2 160182303 . T . PASS END=160182339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:62:0,120,1800:0,142,255:40,0 chr2 160182340 . T . PASS END=160182429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:40:0,107,1474:0,107,255:40,0 chr2 160186280 . T . PASS END=160186362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:68:0,120,1800:0,204,255:40,0 chr2 160186363 . C . PASS END=160186370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,203,255:40,0 chr2 160189051 . C . PASS END=160189197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1180:0,81,255:40,0 chr2 160193453 . A . PASS END=160193455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 160193456 . T . PASS END=160193456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 160193457 . T . PASS END=160193465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr2 160193466 . G . PASS END=160193471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 160193472 . T . PASS END=160193472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 160193473 . C . PASS END=160193507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,972:0,81,255:37,0 chr2 160193508 . A . PASS END=160193508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1235:0,70,255:34,0 chr2 160193509 . G . PASS END=160193588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,102,1432:0,107,255:40,0 chr2 160193973 . C . PASS END=160194283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:30:0,87,1133:0,90,255:40,0 chr2 160203997 . C . PASS END=160204157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,112,1436:0,112,255:40,0 chr2 160205189 . C . PASS END=160205344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:47:0,120,1800:0,125,255:40,0 chr2 160205518 . C . PASS END=160205747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:35:0,84,1260:0,105,255:40,0 chr2 160205748 . C . PASS END=160205753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 160205754 . C . PASS END=160205765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:29,0 chr2 160205766 . C . PASS END=160205768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 160205769 . A . PASS END=160205769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:23,0 chr2 160205770 . T . PASS END=160205771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 160205772 . A . PASS END=160205772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:22,0 chr2 160205773 . T . PASS END=160205774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:24,0 chr2 160205775 . G . PASS END=160205791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:41:19:0,41,659:0,41,255:19,0 chr2 160206219 . C . PASS END=160206868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:36:0,95,1321:0,95,255:40,0 chr2 160229556 . C . PASS END=160229556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 160229557 . T . PASS END=160229557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 160229558 . T . PASS END=160229652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:27:0,81,1019:0,81,255:40,0 chr2 160229653 . C . PASS END=160229653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:36,0 chr2 160229654 . A . PASS END=160229665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,103,1316:0,103,255:38,0 chr2 160229666 . G . PASS END=160229666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:34,0 chr2 160229667 . C . PASS END=160229682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1191:0,91,255:35,0 chr2 160229683 . T . PASS END=160229700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,66,255:25,2 chr2 160231202 . T . PASS END=160231264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,247,255:40,0 chr2 160239070 . C . PASS END=160239073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 160239074 . T . PASS END=160239084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,952:0,84,255:31,0 chr2 160239085 . A . PASS END=160239085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr2 160239086 . T . PASS END=160239087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1036:0,93,255:31,0 chr2 160239088 . A . PASS END=160239088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:29,0 chr2 160239089 . G . PASS END=160239313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:33:0,81,1107:0,83,255:40,0 chr2 160240117 . T . PASS END=160240191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:83:0,120,1800:0,228,255:40,0 chr2 160241666 . C . PASS END=160241668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr2 160241669 . A . PASS END=160241880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:28:0,81,1003:0,83,255:40,0 chr2 160242864 . C . PASS END=160242865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,929:0,62,255:26,0 chr2 160242866 . T . PASS END=160242876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:32,0 chr2 160242877 . A . PASS END=160242877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 160242878 . T . PASS END=160243100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:32:0,81,1111:0,85,255:40,0 chr2 160243101 . A . PASS END=160243106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:26,0 chr2 160243107 . C . PASS END=160243111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:27,0 chr2 160243112 . G . PASS END=160243118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,894:0,64,255:26,0 chr2 160245856 . C . PASS END=160245996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,2:81:99:50:0,120,1800:0,137,255:40,0 chr2 160252280 . T . PASS END=160252345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,110,1800:0,110,255:40,0 chr2 160253579 . C . PASS END=160253611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,170,255:40,0 chr2 160253856 . C . PASS END=160253900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:95:0,120,1800:0,255,255:40,0 chr2 160255340 . C . PASS END=160255405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:65:0,120,1800:0,150,255:40,1 chr2 160257110 . C . PASS END=160257175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:77:0,120,1800:0,191,255:40,0 chr2 160261360 . C . PASS END=160261421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:89:0,120,1800:0,198,255:40,0 chr2 160261533 . C . PASS END=160261625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:64:0,120,1800:0,165,255:40,0 chr2 160268846 . C . PASS END=160268846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 160268847 . T . PASS END=160268847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr2 160268848 . T . PASS END=160269014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:30:0,85,1103:0,85,255:40,0 chr2 160269015 . A . PASS END=160269042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,65,255:26,0 chr2 160269043 . C . PASS END=160269056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:21:0,51,765:0,52,255:19,0 chr2 160276291 . C . PASS END=160276308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,176,255:40,0 chr2 160284452 . C . PASS END=160284553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,110,1800:0,110,255:40,0 chr2 160284822 . C . PASS END=160284930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:33:0,99,1126:0,99,255:40,0 chr2 160285711 . C . PASS END=160285771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:82:0,120,1800:0,222,255:40,0 chr2 160287374 . C . PASS END=160287374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 160287375 . A . PASS END=160287375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,889:0,67,255:27,0 chr2 160287376 . G . PASS END=160287646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:86:31:0,86,1164:0,86,255:40,0 chr2 160287647 . A . PASS END=160287647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:39,0 chr2 160287648 . T . PASS END=160287667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:37:0,90,1413:0,90,255:40,0 chr2 160289268 . C . PASS END=160289285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,112,1515:0,112,255:40,0 chr2 160289286 . A . PASS END=160289286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,7:50:33:50:0,33,1252:0,33,255:39,0 chr2 160289287 . T . PASS END=160289506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:83:49:0,83,1448:0,83,255:40,0 chr2 160289507 . G . PASS END=160289543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,161,255:40,0 chr2 160289544 . T C, 49.88 PASS DP=54;MQ=249.71;MQRankSum=5.808;ReadPosRankSum=3.852;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,26,0:0.481,0.000:54:14,14,0:14,12,0:48:85,0,50,901,950,1851:255,0,255:23,0:4.9883e+01,6.6269e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,13,13:14,14,9,17 chr2 160289545 . C . PASS END=160289581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,120,1800:0,141,255:40,0 chr2 160289582 . G . PASS END=160289858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:34:0,87,1305:0,97,255:40,0 chr2 160289859 . C . PASS END=160289863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,76,255:23,0 chr2 160289864 . T . PASS END=160289873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:22:0,42,630:0,66,255:18,0 chr2 160289874 . C . PASS END=160289874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:15,0 chr2 160294814 . C . PASS END=160294841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,133,255:40,0 chr2 160294842 . A G, 50.00 PASS DP=66;MQ=250.00;MQRankSum=6.948;ReadPosRankSum=0.908;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,36,0:0.545,0.000:66:17,22,0:13,14,0:48:85,0,49,1227,1007,2234:255,0,255:30,0:5.0000e+01,6.9375e-05,5.2222e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,14,26,10:15,15,22,14 chr2 160294843 . A . PASS END=160294879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:66:0,120,1800:0,176,255:40,0 chr2 160294880 . A . PASS END=160295206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:45:0,117,1755:0,135,255:40,0 chr2 160295520 . C . PASS END=160295694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:42:0,93,1336:0,93,255:40,2 chr2 160295695 . G . PASS END=160295723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:39:0,84,1312:0,84,255:40,0 chr2 160303293 . C . PASS END=160303473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:87:36:0,87,1151:0,87,255:40,0 chr2 160303474 . G . PASS END=160303475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,94,255:24,0 chr2 160303476 . C . PASS END=160303481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:39:0,81,1215:0,100,255:27,0 chr2 160303482 . T . PASS END=160303486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,84,255:26,0 chr2 160304753 . C . PASS END=160304884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:29:0,82,1048:0,82,255:40,0 chr2 160304885 . G . PASS END=160304906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr2 160304907 . C . PASS END=160304919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,594:0,49,255:18,0 chr2 160304920 . C . PASS END=160304920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:15,0 chr2 160310124 . C . PASS END=160310150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1337:0,101,255:40,0 chr2 160310151 . C . PASS END=160310151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:40,0 chr2 160310152 . G . PASS END=160310208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,120,1800:0,121,255:40,0 chr2 160310209 . G . PASS END=160310245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,149,255:40,0 chr2 160310246 . A G, 50.00 PASS DP=56;MQ=250.00;MQRankSum=6.411;ReadPosRankSum=1.755;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,29,0:0.518,0.000:56:14,13,0:13,16,0:48:85,0,50,1021,929,1950:255,0,255:25,0:5.0000e+01,6.6010e-05,5.2862e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,17,15,14:17,10,13,16 chr2 160310247 . T . PASS END=160310283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:35:0,96,1440:0,105,255:40,0 chr2 160310284 . T . PASS END=160310297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:32,0 chr2 160310298 . T . PASS END=160310312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:27:0,65,969:0,65,255:26,0 chr2 160335086 . C . PASS END=160335091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,391:0,36,255:13,0 chr2 160335092 . G . PASS END=160335103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:17,0 chr2 160335104 . A . PASS END=160335104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 160335105 . G . PASS END=160335107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 160335108 . A . PASS END=160335108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:15,0 chr2 160335109 . A . PASS END=160335118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 160335119 . C . PASS END=160335164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,821:0,66,255:24,0 chr2 160335165 . T . PASS END=160335165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 160335166 . G . PASS END=160335176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 160335177 . A . PASS END=160335177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 160335178 . G . PASS END=160335183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,695:0,66,255:22,0 chr2 160335184 . G . PASS END=160335188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 160335189 . A . PASS END=160335189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:16,0 chr2 160335190 . G . PASS END=160335210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:16,0 chr2 160335211 . A . PASS END=160335222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:12,0 chr2 160335223 . G . PASS END=160335223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:7,0 chr2 160335224 . A . PASS END=160335224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:6,0 chr2 160335225 . C . PASS END=160335228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 160335229 . A . PASS END=160335232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:15:11:0,15,225:0,33,255:5,0 chr2 160396789 . C . PASS END=160396837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,203,255:40,0 chr2 160585534 . A . PASS END=160585538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr2 160585539 . G . PASS END=160585656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:34:0,95,1227:0,95,255:40,0 chr2 160585657 . T . PASS END=160585657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:30,0 chr2 160585658 . C . PASS END=160585676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:30,0 chr2 160585677 . T . PASS END=160585686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:28:0,66,990:0,71,255:26,0 chr2 160590555 . A . PASS END=160590593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:91:0,120,1800:0,247,255:40,0 chr2 160599572 . T . PASS END=160599572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,600:0,26,255:17,0 chr2 160599573 . C . PASS END=160599575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,684:0,44,255:18,0 chr2 160599576 . C . PASS END=160599592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,754:0,63,255:26,0 chr2 160599593 . G . PASS END=160599679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:27:0,81,956:0,81,255:40,0 chr2 160599680 . G . PASS END=160599716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:55:0,120,1800:0,139,255:40,0 chr2 160599717 . C G, 50.00 PASS DP=55;MQ=250.00;MQRankSum=6.188;ReadPosRankSum=1.857;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,32,0:0.593,0.000:54:7,10,0:15,22,0:46:85,0,45,185,185,185:255,0,255:20,0:5.0000e+01,1.0795e-04,4.8286e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:7,15,15,17:10,12,19,13 chr2 160599718 . T . PASS END=160599754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:42:0,93,1395:0,108,255:40,0 chr2 160599755 . A . PASS END=160599764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:35:0,90,1350:0,94,255:32,0 chr2 160602281 . A . PASS END=160602295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1210:0,95,255:35,0 chr2 160602296 . A . PASS END=160602448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:36:0,105,1575:0,108,255:40,0 chr2 160604316 . A . PASS END=160604774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:32:0,96,1113:0,96,255:40,0 chr2 160604775 . A . PASS END=160604811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:91:42:0,91,1506:0,91,255:40,0 chr2 160604812 . C T, 48.27 PASS DP=42;MQ=250.00;MQRankSum=5.477;ReadPosRankSum=3.291;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,18,0:0.429,0.000:42:13,9,0:11,9,0:47:83,0,50,615,828,1443:255,0,255:26,0:4.8271e+01,8.6460e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,11,7:14,10,6,12 chr2 160604813 . G . PASS END=160604849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,115,1459:0,115,255:40,0 chr2 160604850 . T . PASS END=160605025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:42:0,91,1423:0,91,255:40,0 chr2 160605026 . T . PASS END=160605026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:75:53:0,75,1449:0,75,255:40,0 chr2 160605027 . C . PASS END=160605230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:44:0,99,1611:0,99,255:40,0 chr2 160605231 . G . PASS END=160605267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,136,255:40,0 chr2 160605268 . T C, 212.07 PASS DP=56;MQ=250.00;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,30,0:0,25,0:162:250,165,0,2089,165,2089:255,174,0:0,0:2.1207e+02,1.6207e+02,0.0000e+00,4.5000e+02,1.9684e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,26:0,0,26,29 chr2 160605269 . C . PASS END=160605305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,104,1800:0,104,255:40,0 chr2 160605306 . T . PASS END=160605381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1260:0,81,255:40,0 chr2 160605382 . A . PASS END=160605382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:27,0 chr2 160605383 . G . PASS END=160605383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1161:0,80,255:27,0 chr2 160605384 . A . PASS END=160605384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1028:0,57,255:27,0 chr2 160605385 . T . PASS END=160605385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 160605386 . C . PASS END=160605387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 160605388 . A . PASS END=160605389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1078:0,60,255:26,0 chr2 160605390 . A . PASS END=160605392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 160605393 . G . PASS END=160605399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:25,0 chr2 160605400 . G . PASS END=160605400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:22,0 chr2 160605401 . A . PASS END=160605409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,947:0,67,255:26,0 chr2 160605410 . G . PASS END=160605410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,930:0,37,255:23,0 chr2 160605411 . A . PASS END=160605411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,847:0,48,255:25,0 chr2 160605412 . G . PASS END=160605414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,878:0,64,255:24,0 chr2 160608913 . C . PASS END=160608916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr2 160608917 . C . PASS END=160608917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 160608918 . T . PASS END=160608918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 160608919 . T . PASS END=160608971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1070:0,84,255:38,0 chr2 160608972 . C . PASS END=160608972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr2 160608973 . A . PASS END=160608977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:38,0 chr2 160608978 . C . PASS END=160608978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr2 160608979 . A . PASS END=160608980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1328:0,100,255:38,0 chr2 160608981 . C . PASS END=160608981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr2 160608982 . A . PASS END=160608995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:86:36:0,86,1305:0,86,255:37,0 chr2 160608996 . T . PASS END=160608996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:27,0 chr2 160608997 . G . PASS END=160609000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,92,255:29,0 chr2 160609001 . G . PASS END=160609001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 160609002 . A . PASS END=160609012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 160609013 . T . PASS END=160609013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 160609014 . G . PASS END=160609017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1149:0,93,255:32,0 chr2 160609018 . A . PASS END=160609018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:30,0 chr2 160609019 . G . PASS END=160609020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 160609021 . A . PASS END=160609021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:29,0 chr2 160609022 . A . PASS END=160609034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,923:0,82,255:30,0 chr2 160609035 . T . PASS END=160609035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:24,0 chr2 160609036 . C . PASS END=160609037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:49:29:0,49,1047:0,49,255:24,0 chr2 160609038 . A . PASS END=160609046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:26:0,72,1080:0,78,255:26,0 chr2 160609047 . G . PASS END=160609047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:22,0 chr2 160609048 . T . PASS END=160609051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 160609052 . A . PASS END=160609052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:23,0 chr2 160609053 . A . PASS END=160609060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr2 160609061 . T . PASS END=160609061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 160609062 . T . PASS END=160609062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 160609063 . A . PASS END=160609063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:22,0 chr2 160609064 . C . PASS END=160609064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 160609065 . A . PASS END=160609065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:23,0 chr2 160609066 . G . PASS END=160609071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 160609072 . A . PASS END=160609072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr2 160609073 . A . PASS END=160609073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 160609074 . T . PASS END=160609077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr2 160609078 . C . PASS END=160609078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 160609079 . T . PASS END=160609079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 160609080 . C . PASS END=160609082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 160615737 . G . PASS END=160615738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 160615739 . T . PASS END=160615740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr2 160615741 . T . PASS END=160615747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1103:0,90,255:30,0 chr2 160615748 . G . PASS END=160615748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 160615749 . A . PASS END=160615846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:30:0,90,1078:0,90,255:40,0 chr2 160619391 . G . PASS END=160619396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,105,1575:0,108,255:40,0 chr2 160619397 . T . PASS END=160619397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1412:0,68,255:39,0 chr2 160619398 . A . PASS END=160619504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,104,1427:0,104,255:40,0 chr2 160621137 . T . PASS END=160621185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:87:0,120,1800:0,205,255:40,0 chr2 160623403 . C . PASS END=160623403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 160623404 . G . PASS END=160623427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:63:0,120,1800:0,121,255:40,0 chr2 160623795 . C . PASS END=160623863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:55:0,120,1800:0,144,255:40,0 chr2 160628362 . T . PASS END=160628564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:82:39:0,82,1370:0,82,255:40,0 chr2 160634449 . C . PASS END=160634475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,171,255:40,0 chr2 160636516 . T . PASS END=160636677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:31:0,84,1112:0,86,255:40,0 chr2 160636678 . T . PASS END=160636689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr2 160637393 . C . PASS END=160637509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:35:0,93,1395:0,105,255:40,0 chr2 160639870 . C . PASS END=160639932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:48:0,116,1800:0,116,255:40,0 chr2 160639933 . A . PASS END=160639969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,153,255:40,0 chr2 160639970 . T C, 48.12 PASS DP=61;MQ=250.00;MQRankSum=6.592;ReadPosRankSum=1.137;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,25,0:0.410,0.000:61:23,14,0:13,11,0:46:83,0,47,183,183,183:255,0,255:30,0:4.8119e+01,1.1028e-04,5.0000e+01,1.8289e+02,2.1766e+02,1.8590e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,30,7,18:15,21,8,17 chr2 160639971 . G . PASS END=160639980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,105,1575:0,136,255:40,0 chr2 160654643 . C . LowGQ END=160654698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,55:0,0,55:3,0 chr2 160654699 . G . PASS END=160654700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 160654701 . C . PASS END=160654709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:6:4:0,6,90:0,12,125:3,0 chr2 160661555 . T . PASS END=160661568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1194:0,83,255:33,0 chr2 160661569 . A . PASS END=160661569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:32,0 chr2 160661570 . A . PASS END=160661733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:33:0,86,1233:0,86,255:40,0 chr2 160663484 . C . PASS END=160663640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:38:0,111,1443:0,114,255:40,0 chr2 160663641 . C . PASS END=160663651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:39:0,81,1312:0,81,255:36,0 chr2 160664960 . C . PASS END=160665082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:55:0,120,1800:0,132,255:40,0 chr2 160667037 . C . PASS END=160667037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1028:0,90,255:30,0 chr2 160667038 . A . PASS END=160667038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 160667039 . T . PASS END=160667186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:83:30:0,83,1036:0,83,255:40,0 chr2 160671916 . A . PASS END=160671924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,657:0,41,255:18,0 chr2 160671925 . G . PASS END=160671927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,795:0,69,255:23,0 chr2 160671928 . T . PASS END=160671929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,790:0,53,255:23,0 chr2 160671930 . T . PASS END=160671935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,822:0,72,255:24,0 chr2 160671936 . A . PASS END=160671936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:24,0 chr2 160671937 . T . PASS END=160671937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 160671938 . A . PASS END=160671938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:24,0 chr2 160671939 . G . PASS END=160671940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 160671941 . A . PASS END=160671941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:26,0 chr2 160671942 . C . PASS END=160672084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:29:0,84,1260:0,84,255:40,0 chr2 160673317 . A . PASS END=160673317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:33,0 chr2 160673318 . T . PASS END=160673481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:89:35:0,89,1278:0,89,255:40,0 chr2 160673482 . A . PASS END=160673518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:90:52:0,90,1350:0,122,255:40,0 chr2 160673519 . G A, 49.71 PASS DP=51;MQ=250.00;MQRankSum=6.105;ReadPosRankSum=2.708;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,24,0:0.471,0.000:51:11,10,0:16,14,0:48:84,0,50,849,952,1801:255,0,255:16,0:4.9714e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,19,7,17:16,11,13,11 chr2 160673520 . T . PASS END=160673526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:42:0,90,1350:0,126,255:31,0 chr2 160673527 . T . PASS END=160673527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1502:0,74,255:30,0 chr2 160673528 . T . PASS END=160673528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1233:0,56,255:31,0 chr2 160673529 . C . PASS END=160673540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1218:0,86,255:33,0 chr2 160673541 . C . PASS END=160673543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 160676237 . C . PASS END=160676389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:63:0,120,1800:0,179,255:40,0 chr2 160676390 . T . PASS END=160676400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:84:47:0,84,1260:0,89,255:40,0 chr2 160676401 . G . PASS END=160676414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:60:38:0,60,900:0,70,255:24,0 chr2 160676415 . C . PASS END=160676421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:48:38:0,48,720:0,100,255:18,0 chr2 160676422 . A . PASS END=160676424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:30:38:0,30,450:0,114,255:11,0 chr2 160676425 . G . PASS END=160676426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:27:36:0,27,405:0,108,255:9,0 chr2 160676427 . C A, 154.43 PASS DP=36;MQ=248.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,23,0:0,13,0:104:192,107,0,1337,107,1337:255,108,0:0,0:1.5443e+02,1.0443e+02,0.0000e+00,4.5000e+02,1.3920e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,30:0,0,15,21 chr2 160676428 . T . PASS END=160676431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:15:36:0,15,225:0,92,255:6,0 chr2 160688181 . T . PASS END=160688297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,120,1800:0,134,255:40,0 chr2 160690555 . T . PASS END=160690722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:38:0,102,1450:0,110,255:40,0 chr2 160691991 . T . PASS END=160692005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:25,0 chr2 160692006 . A . PASS END=160692006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 160692007 . A . PASS END=160692007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 160692008 . A . PASS END=160692015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 160692016 . T . PASS END=160692156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:29:0,82,1094:0,82,255:40,0 chr2 160697240 . A . PASS END=160697243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 160697244 . T . PASS END=160697261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:31,0 chr2 160697262 . C . PASS END=160697262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 160697263 . A . PASS END=160697466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:80:32:0,80,1134:0,80,255:40,0 chr2 160698756 . C . PASS END=160698885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:94:37:0,94,1189:0,94,255:40,0 chr2 160706491 . A . PASS END=160706651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:34:0,86,1210:0,86,255:40,0 chr2 160706873 . C . PASS END=160706904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,132,255:40,0 chr2 160706905 . G . PASS END=160706905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,9:64:20:64:0,20,1662:0,20,255:40,0 chr2 160706906 . T . PASS END=160706978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:51:0,120,1800:0,133,255:40,0 chr2 160708712 . C . PASS END=160708850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:41:0,107,1451:0,107,255:40,0 chr2 160708851 . T . PASS END=160708851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1408:0,74,255:34,0 chr2 160709784 . C . PASS END=160709863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:43:0,120,1800:0,122,255:40,0 chr2 160710141 . T . PASS END=160710208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:74:0,120,1800:0,194,255:40,0 chr2 160710871 . A . PASS END=160710876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1036:0,93,255:31,0 chr2 160710877 . T . PASS END=160710877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 160710878 . A . PASS END=160710884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1037:0,85,255:34,0 chr2 160710885 . T . PASS END=160710891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:32,0 chr2 160710892 . G . PASS END=160710892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:28,0 chr2 160710893 . G . PASS END=160710921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:36:0,90,1350:0,96,255:40,0 chr2 160710922 . T C, 49.97 PASS DP=46;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=0.034;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:11,10,0:12,12,0:47:85,0,47,185,185,185:255,0,255:24,0:4.9970e+01,8.7237e-05,5.0000e+01,1.8474e+02,2.1951e+02,1.8775e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,15,7,15:8,15,13,9 chr2 160710923 . G . PASS END=160710959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,108,1621:0,108,255:40,0 chr2 160710960 . C . PASS END=160711007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,120,1800:0,124,255:40,0 chr2 160711008 . C . PASS END=160711044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:41:0,102,1530:0,119,255:40,0 chr2 160711045 . G C, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.425;ReadPosRankSum=3.980;FractionInformativeReads=0.976;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,23,0:0.561,0.000:41:7,9,0:11,14,0:47:85,0,46,185,185,185:255,0,255:15,0:5.0000e+01,9.5520e-05,4.9217e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,13,6,17:12,6,14,9 chr2 160711046 . T . PASS END=160711046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 160711415 . C . PASS END=160711450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:62:0,120,1800:0,151,255:40,0 chr2 160714873 . C . PASS END=160714987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:93:41:0,93,1395:0,117,255:40,0 chr2 160717332 . C . PASS END=160717400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,117,1737:0,117,255:40,0 chr2 160721350 . T . PASS END=160721431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:37:0,111,1421:0,111,255:40,0 chr2 160728962 . C . PASS END=160729095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1252:0,92,255:40,0 chr2 160729096 . A . PASS END=160729096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:24,0 chr2 160729097 . T . PASS END=160729104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:35:0,60,900:0,92,255:23,0 chr2 160731955 . C . PASS END=160731955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 160731956 . T . PASS END=160731992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,553:0,45,255:18,0 chr2 160731993 . C . PASS END=160731999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 160732000 . A . PASS END=160732012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,53,255:19,0 chr2 160732013 . G . PASS END=160732034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,742:0,69,255:23,0 chr2 160732035 . G . PASS END=160732036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 160732037 . C . PASS END=160732053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,870:0,72,255:24,0 chr2 160732054 . T . PASS END=160732054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 160732055 . T . PASS END=160732055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 160732056 . T . PASS END=160732056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:23,0 chr2 160732057 . C . PASS END=160732063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:25,0 chr2 160732064 . A . PASS END=160732064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 160732065 . T . PASS END=160732084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:26,0 chr2 160732085 . C . PASS END=160732086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160732087 . G . PASS END=160732123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr2 160732124 . G . PASS END=160732124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 160732125 . T . PASS END=160732130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 160732131 . T . PASS END=160732147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,50,255:17,0 chr2 160732148 . G . PASS END=160732148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:15,0 chr2 160732149 . G . PASS END=160732154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 160734835 . C . PASS END=160734970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:48:0,112,1800:0,112,255:40,0 chr2 160734971 . T . PASS END=160735004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,167,255:40,0 chr2 160735144 . C . PASS END=160735232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,120,1800:0,147,255:40,0 chr2 160735770 . C . PASS END=160735880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:45:0,105,1575:0,120,255:40,0 chr2 160737594 . C . PASS END=160737620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:38:0,84,1373:0,84,255:40,0 chr2 160737621 . C T, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.019;ReadPosRankSum=0.124;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,30,0:0.588,0.000:51:7,16,0:14,14,0:47:85,0,47,1057,714,1771:255,0,255:21,0:5.0000e+01,8.5425e-05,5.0137e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,8,16,14:7,14,18,12 chr2 160737622 . G . PASS END=160737658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:57:0,120,1800:0,156,255:40,0 chr2 160737659 . A . PASS END=160737751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:96:43:0,96,1442:0,96,255:40,0 chr2 160738635 . C . PASS END=160738639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:32,0 chr2 160738640 . T . PASS END=160738676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:34:0,92,1222:0,92,255:40,0 chr2 160738677 . G A, 50.00 PASS DP=48;MQ=250.00;MQRankSum=5.845;ReadPosRankSum=2.855;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,28,0:0.583,0.000:48:11,19,0:9,9,0:47:85,0,48,956,715,1672:255,0,255:20,0:5.0000e+01,8.0506e-05,5.0680e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,8,14,14:11,9,19,9 chr2 160738678 . A . PASS END=160738714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:47:0,120,1800:0,140,255:40,0 chr2 160738715 . C . PASS END=160738813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:38:0,84,1260:0,104,255:40,0 chr2 160738814 . T . PASS END=160738826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:22:0,60,681:0,66,255:22,0 chr2 160741664 . C . PASS END=160741785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,98,255:40,0 chr2 160741786 . G . PASS END=160741786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 160741787 . T . PASS END=160741789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 160741790 . G . PASS END=160741803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:23:0,65,861:0,65,255:26,0 chr2 160741804 . T . PASS END=160741804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr2 160742931 . C . PASS END=160743041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:88:42:0,88,1395:0,88,255:40,0 chr2 160746724 . C . PASS END=160746733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1128:0,88,255:35,0 chr2 160746734 . A . PASS END=160746734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:34,0 chr2 160746735 . G . PASS END=160746736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1304:0,94,255:36,0 chr2 160746737 . T . PASS END=160746737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr2 160746738 . A . PASS END=160746888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1264:0,81,255:40,0 chr2 160750425 . C . PASS END=160750427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 160750428 . G . PASS END=160750439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 160750440 . T . PASS END=160750440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 160750441 . G . PASS END=160750449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:30,0 chr2 160750450 . T . PASS END=160750450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr2 160750451 . C . PASS END=160750564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1103:0,87,255:40,0 chr2 160750565 . C . PASS END=160750577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,945:0,78,255:26,0 chr2 160750578 . C . PASS END=160750580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 160750581 . C . PASS END=160750583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 160750584 . T . PASS END=160750595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,46,255:17,0 chr2 160755199 . C . PASS END=160755200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr2 160755201 . T . PASS END=160755207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:19,0 chr2 160755208 . G . PASS END=160755211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 160755212 . G . PASS END=160755212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 160755213 . T . PASS END=160755217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:21,0 chr2 160755218 . A . PASS END=160755218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 160755219 . A . PASS END=160755224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 160755225 . T . PASS END=160755225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 160755226 . C . PASS END=160755227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 160755228 . T . PASS END=160755228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 160755229 . C . PASS END=160755231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 160755232 . A . PASS END=160755232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 160755233 . G . PASS END=160755240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,817:0,69,255:23,0 chr2 160755241 . T . PASS END=160755241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 160755242 . C . PASS END=160755242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 160755243 . T . PASS END=160755243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 160755244 . T . PASS END=160755253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 160755254 . A . PASS END=160755254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr2 160755255 . G . PASS END=160755306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,807:0,69,255:26,0 chr2 160755307 . G . PASS END=160755308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160755309 . G . PASS END=160755319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 160755320 . C . PASS END=160755327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 160755328 . G . PASS END=160755341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1016:0,71,255:26,0 chr2 160755342 . C . PASS END=160755348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 160755349 . G . PASS END=160755349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 160755350 . C . PASS END=160755363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,84,255:33,0 chr2 160755364 . C . PASS END=160755364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 160755365 . A . PASS END=160755369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr2 160755370 . T . PASS END=160755371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1227:0,66,255:32,0 chr2 160755372 . A . PASS END=160755372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1278:0,56,255:32,0 chr2 160755373 . A . PASS END=160755374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:73:37:0,73,1325:0,73,255:34,0 chr2 160755375 . A . PASS END=160755375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 160755376 . T . PASS END=160755376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:33,0 chr2 160755377 . T . PASS END=160755502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:37:0,95,1297:0,95,255:40,1 chr2 160755503 . T . PASS END=160755503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:50:40:0,50,1259:0,50,255:32,0 chr2 160755504 . A . PASS END=160755537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1155:0,80,255:35,0 chr2 160755538 . T . PASS END=160755564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,824:0,61,255:26,0 chr2 160755565 . C . PASS END=160755565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:24,0 chr2 160755566 . A . PASS END=160755567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 160755568 . T . PASS END=160755568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:23,0 chr2 160755569 . A . PASS END=160755569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr2 160755570 . G . PASS END=160755570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 160761100 . C . PASS END=160761119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr2 160761120 . G . PASS END=160761126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 160761127 . C . PASS END=160761127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 160761128 . G . PASS END=160761149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr2 160761150 . A . PASS END=160761155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 160761156 . C . PASS END=160761160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160761161 . C . PASS END=160761162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 160761163 . G . PASS END=160761163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:25,0 chr2 160761164 . G . PASS END=160761173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:25,0 chr2 160761174 . G . PASS END=160761193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:30:11:0,30,410:0,33,255:13,0 chr2 160798289 . T . PASS END=160798312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,101,1404:0,101,255:40,0 chr2 160798313 . A . PASS END=160798313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1506:0,63,255:40,0 chr2 160798314 . G . PASS END=160798503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,100,1638:0,100,255:40,0 chr2 160798638 . C . PASS END=160798670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,175,255:40,0 chr2 160800214 . T . PASS END=160800221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,191,255:40,0 chr2 160801417 . C . PASS END=160801573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1183:0,87,255:40,0 chr2 160801574 . A . PASS END=160801574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:27,0 chr2 160801575 . A . PASS END=160801575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 160801576 . A . PASS END=160801577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:26,0 chr2 160801578 . C . PASS END=160801582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,67,255:18,0 chr2 160801583 . T . PASS END=160801583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,921:0,29,255:17,0 chr2 160801584 . A . PASS END=160801593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:18:0,41,649:0,41,255:18,0 chr2 160803304 . T . PASS END=160803428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:92:52:0,92,1530:0,92,255:40,0 chr2 160803930 . C . PASS END=160804070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:92:42:0,92,1442:0,92,255:40,0 chr2 160806119 . C . PASS END=160806133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 160806134 . A . PASS END=160806165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:25,0 chr2 160806166 . G . PASS END=160806216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1188:0,83,255:36,0 chr2 160806217 . G . PASS END=160806228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:28:0,72,1080:0,84,255:26,0 chr2 160806229 . T . PASS END=160806231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 160806232 . T . PASS END=160806232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 160806233 . T . PASS END=160806236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 160806237 . A . PASS END=160806237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 160806238 . A . PASS END=160806243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 160806244 . A . PASS END=160806287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr2 160807851 . A . PASS END=160808037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:83:32:0,83,1158:0,83,255:40,0 chr2 160808038 . G . PASS END=160808074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:73:0,120,1800:0,220,255:40,0 chr2 160808075 . C T, 48.03 PASS DP=59;MQ=250.00;MQRankSum=6.512;ReadPosRankSum=2.339;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,25,0:0.424,0.000:59:19,9,0:15,16,0:47:83,0,50,859,1202,2061:255,0,255:26,0:4.8033e+01,9.0084e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,27,6,19:14,20,12,13 chr2 160808076 . G . PASS END=160808088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:43:0,90,1408:0,90,255:40,0 chr2 160808089 . T . PASS END=160808089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1299:0,57,255:34,0 chr2 160811710 . C . PASS END=160811857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:52:0,120,1800:0,143,255:40,0 chr2 160812209 . A . PASS END=160812215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:94:36:0,94,1232:0,94,255:37,0 chr2 160812216 . A . PASS END=160812216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:35,0 chr2 160812217 . T . PASS END=160812339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:98:38:0,98,1462:0,98,255:40,0 chr2 160813021 . C . PASS END=160813034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1166:0,85,255:34,0 chr2 160813035 . C . PASS END=160813035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr2 160813036 . T . PASS END=160813124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,89,255:40,0 chr2 160813125 . T . PASS END=160813135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:27:0,65,976:0,65,255:26,0 chr2 160813136 . G . PASS END=160813136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr2 160813137 . C . PASS END=160813137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 160813138 . A . PASS END=160813138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 160824050 . C . PASS END=160824051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1239:0,86,255:34,0 chr2 160824052 . T . PASS END=160824052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1074:0,55,255:32,0 chr2 160824053 . A . PASS END=160824189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:35:0,93,1221:0,93,255:40,2 chr2 160825767 . C . PASS END=160825870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,117,1755:0,123,255:40,0 chr2 160826659 . C . PASS END=160826723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,170,255:40,0 chr2 160832579 . C . PASS END=160832736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:98:38:0,98,1402:0,98,255:40,0 chr2 160833196 . C . PASS END=160833225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,107,1706:0,107,255:40,0 chr2 160833226 . T . PASS END=160833231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:90:64:0,90,1800:0,90,255:40,0 chr2 160833795 . C . PASS END=160833927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:89:35:0,89,1225:0,89,255:40,0 chr2 160836341 . A . PASS END=160836425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,155,255:40,0 chr2 160840439 . C . PASS END=160840584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:46:0,120,1800:0,137,255:40,0 chr2 160843667 . C . PASS END=160843727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:34:0,99,1266:0,102,255:40,0 chr2 160843728 . C . PASS END=160843728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:68:56:0,68,1562:0,68,255:40,0 chr2 160843729 . A . PASS END=160843847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:34:0,81,1215:0,102,255:40,0 chr2 160843848 . G . PASS END=160843858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:28:0,63,945:0,84,255:26,0 chr2 160843859 . A . PASS END=160843869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:54:23:0,54,810:0,65,255:19,0 chr2 160862163 . G . PASS END=160862320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:32:0,80,1141:0,80,255:40,0 chr2 160862321 . G . PASS END=160862332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:32:0,63,945:0,79,255:24,0 chr2 160869774 . C . PASS END=160869886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:35:0,84,1260:0,94,255:40,0 chr2 160873125 . C . PASS END=160873223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:42:0,88,1559:0,88,255:40,0 chr2 160876617 . A . PASS END=160876774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,111,1665:0,129,255:40,0 chr2 160879176 . C . PASS END=160879221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:29:0,81,1115:0,87,255:40,0 chr2 160879222 . T . PASS END=160879258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,120,255:40,0 chr2 160879259 . C T, 50.00 PASS DP=61;MQ=250.00;MQRankSum=6.592;ReadPosRankSum=4.759;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,36,0:0.590,0.000:61:8,13,0:17,23,0:47:85,0,47,1280,894,2174:255,0,255:23,0:5.0000e+01,8.5166e-05,5.0164e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,16,22,14:12,13,19,17 chr2 160879260 . G . PASS END=160879296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,160,255:40,0 chr2 160879297 . T . PASS END=160879342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:45:0,81,1215:0,97,255:40,0 chr2 160879343 . G . PASS END=160879356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:25:0,60,900:0,67,255:25,0 chr2 160879357 . C . PASS END=160879359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:19,0 chr2 160879360 . C . PASS END=160879360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160879361 . G . PASS END=160879361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:19,0 chr2 160879362 . C . PASS END=160879366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160879367 . T . PASS END=160879367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:18,0 chr2 160879368 . T . PASS END=160879369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160879370 . T . PASS END=160879370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:20,0 chr2 160884729 . C . PASS END=160884865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,107,1438:0,107,255:40,0 chr2 160884866 . T . PASS END=160884866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1476:0,75,255:39,0 chr2 160884867 . T . PASS END=160884872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,118,1592:0,118,255:40,0 chr2 160885361 . C . PASS END=160885380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,170,255:40,0 chr2 160885381 . T . PASS END=160885417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:67:0,120,1800:0,188,255:40,0 chr2 160885418 . G C, 48.98 PASS DP=77;MQ=249.01;MQRankSum=7.063;ReadPosRankSum=5.780;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,34,0:0.442,0.000:77:17,20,0:26,14,0:48:84,0,50,1208,1428,2636:255,0,255:37,0:4.8983e+01,7.6623e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,16,16,18:15,28,14,20 chr2 160885419 . T . PASS END=160885441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,184,255:40,0 chr2 160885442 . T C, 49.45 PASS DP=65;MQ=249.89;MQRankSum=6.441;ReadPosRankSum=1.967;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,30,0:0.462,0.000:65:13,20,0:22,10,0:48:84,0,50,1044,1244,2288:255,0,255:26,0:4.9454e+01,7.0928e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,17,12,18:18,17,12,18 chr2 160885443 . C . PASS END=160885474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:90:33:0,90,1350:0,99,255:40,0 chr2 160889470 . C . PASS END=160889635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:90:39:0,90,1350:0,117,255:40,0 chr2 160889636 . T . PASS END=160889639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,92,255:29,0 chr2 160889640 . G . PASS END=160889643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:26,0 chr2 160898536 . T . PASS END=160898661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1096:0,80,255:40,0 chr2 160898662 . G . PASS END=160898679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,953:0,62,255:26,0 chr2 160898680 . C . PASS END=160898680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr2 160898681 . G . PASS END=160898686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:23,0 chr2 160898687 . G . PASS END=160898709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,690:0,57,255:19,0 chr2 160901285 . C . PASS END=160901288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,517:0,51,255:18,0 chr2 160901289 . G . PASS END=160901300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,677:0,60,255:20,0 chr2 160901301 . A . PASS END=160901301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr2 160901302 . C . PASS END=160901303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 160901304 . A . PASS END=160901308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 160901309 . C . PASS END=160901309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 160901310 . T . PASS END=160901310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 160901311 . C . PASS END=160901312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 160901313 . A . PASS END=160901313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 160901314 . C . PASS END=160901315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 160901316 . A . PASS END=160901317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 160901318 . C . PASS END=160901323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,807:0,63,255:22,0 chr2 160901324 . C . PASS END=160901325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 160901326 . T . PASS END=160901340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:24,0 chr2 160901341 . T . PASS END=160901341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 160901342 . G . PASS END=160901357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,955:0,78,255:26,0 chr2 160901358 . G . PASS END=160901388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1086:0,80,255:32,0 chr2 160901389 . A . PASS END=160901393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr2 160901394 . G . PASS END=160901479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:33:0,89,1211:0,89,255:39,0 chr2 160901480 . G . PASS END=160901516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,104,1465:0,104,255:40,0 chr2 160901517 . A G, 173.40 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,20,0:0,22,0:123:211,126,0,1604,126,1604:255,126,0:0,0:1.7340e+02,1.2340e+02,0.0000e+00,4.5000e+02,1.5817e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,20:0,0,30,12 chr2 160901518 . C . PASS END=160901554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,102,1530:0,114,255:40,0 chr2 160901555 . A . PASS END=160901574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:36:0,95,1327:0,95,255:39,0 chr2 160901575 . T . PASS END=160901575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1124:0,72,255:34,0 chr2 160901576 . T . PASS END=160901656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:31:0,85,1111:0,85,255:40,0 chr2 160901657 . A . PASS END=160901657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 160901658 . T . PASS END=160901661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,95,255:30,0 chr2 160901662 . C . PASS END=160901668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,73,255:26,0 chr2 160918806 . C . PASS END=160918807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 160918808 . T . PASS END=160918808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,726:0,41,255:23,0 chr2 160918809 . G . PASS END=160918810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 160918811 . C . PASS END=160918811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 160918812 . A . PASS END=160918813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,826:0,75,255:25,0 chr2 160918814 . T . PASS END=160918814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:23,0 chr2 160918815 . C . PASS END=160918820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:26,0 chr2 160918821 . G . PASS END=160918821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:25,0 chr2 160918822 . C . PASS END=160918852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,887:0,62,255:26,0 chr2 160918853 . T . PASS END=160918874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,706:0,46,255:18,0 chr2 160918875 . C . PASS END=160918875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:13,2 chr2 160918876 . C . LowGQ END=160918879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:18:0,0,491:1,0,255:13,2 chr2 160918880 . A . PASS END=160918882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 160918883 . A . PASS END=160918883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 160918884 . G . PASS END=160918893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:14,0 chr2 160918894 . C . PASS END=160918913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 160918914 . T . PASS END=160918914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 160958247 . C . PASS END=160958304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,144,255:40,0 chr2 160958305 . T . PASS END=160958324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:81:75:0,81,1215:0,193,255:40,0 chr2 160958325 . T . PASS END=160958328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:60:73:0,60,900:0,130,255:24,0 chr2 160958329 . T . PASS END=160958332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:42:60:0,42,630:0,163,255:19,0 chr2 160958333 . G . PASS END=160958335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:30:52:0,30,450:0,156,255:13,0 chr2 160958336 . G . PASS END=160958336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:24:52:0,24,360:0,156,255:8,0 chr2 160958337 . A . PASS END=160958343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:15:49:0,15,225:0,147,255:6,1 chr2 160958344 . C . PASS END=160958345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:9:46:0,9,135:0,138,255:3,0 chr2 160964190 . C . PASS END=160964323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:46:0,93,1395:0,128,255:40,0 chr2 160964324 . T . PASS END=160964324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:31,0 chr2 160964325 . G . PASS END=160964342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:31,0 chr2 160964343 . A . PASS END=160964343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 160964344 . G . PASS END=160964351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 160964352 . A . PASS END=160964356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:25,0 chr2 160968591 . C . PASS END=160968698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:64:0,120,1800:0,153,255:40,0 chr2 160968699 . C . PASS END=160968710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:59:0,120,1800:0,169,255:40,0 chr2 160980302 . C . PASS END=160980399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,105,1529:0,105,255:40,0 chr2 160982890 . C . PASS END=160982895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 160982896 . G . PASS END=160983022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1062:0,86,255:40,0 chr2 160983023 . C . PASS END=160983025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1302:0,102,255:35,0 chr2 160983026 . A . PASS END=160983026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:33,0 chr2 160983027 . G . PASS END=160983059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:35:0,93,1363:0,95,255:36,0 chr2 160983060 . G C, 50.00 PASS DP=37;MQ=249.36;MQRankSum=4.648;ReadPosRankSum=1.021;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,20,0:0.541,0.000:37:11,7,0:6,13,0:48:85,0,49,710,578,1288:255,0,255:16,0:5.0000e+01,6.8339e-05,5.2395e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,6,14:11,6,9,11 chr2 160983061 . C . PASS END=160983097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1260:0,86,255:35,0 chr2 160983098 . C . PASS END=160983101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 160983102 . G . PASS END=160983109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr2 160983110 . T . PASS END=160983110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:18,0 chr2 160983111 . A . PASS END=160983112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:21,0 chr2 160993945 . C . PASS END=160993946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 160993947 . C . PASS END=160993972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:23,0 chr2 160993973 . G . PASS END=160993973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 160993974 . C . PASS END=160993977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 160993978 . A . PASS END=160993978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 160993979 . G . PASS END=160993986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,755:0,69,255:23,0 chr2 160993987 . C . PASS END=160993987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 160993988 . A . PASS END=160994024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,775:0,60,255:23,0 chr2 160994025 . G . PASS END=160994025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 160994026 . A . PASS END=160994027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 160994028 . A . PASS END=160994058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 160994059 . C . PASS END=160994059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr2 160994060 . A . PASS END=160994060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 160994061 . C . PASS END=160994081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 160994082 . T . PASS END=160994125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 160994126 . G . PASS END=160994126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 160994127 . C . PASS END=160994146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 160994147 . C . PASS END=160994159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:16,0 chr2 160994160 . T . PASS END=160994160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:14,0 chr2 160994161 . G . PASS END=160994181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr2 160994182 . G . PASS END=160994215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,711:0,63,255:26,0 chr2 160994216 . G . PASS END=160994217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 160994218 . T . PASS END=160994219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 160994220 . A . PASS END=160994231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 160994232 . T . PASS END=160994232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 160994233 . T . PASS END=160994235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 160994236 . G . PASS END=160994236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr2 160994237 . A . PASS END=160994238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 160994239 . A . PASS END=160994239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 160994240 . G . PASS END=160994246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 160994247 . T . PASS END=160994247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr2 160994248 . T . PASS END=160994249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 160994250 . C . PASS END=160994251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 160994252 . T . PASS END=160994261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 160994262 . A . PASS END=160994321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,839:0,62,255:26,0 chr2 160994322 . C . PASS END=160994327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 160994328 . C . PASS END=160994362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,465:0,36,255:13,0 chr2 160994576 . T . PASS END=160994710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,108,1522:0,113,255:40,0 chr2 160998493 . T . PASS END=160998572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:32:0,81,1215:0,86,255:40,0 chr2 160998573 . T . PASS END=160998582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr2 161025723 . C . PASS END=161025818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:68:0,120,1800:0,190,255:40,0 chr2 161029080 . C . PASS END=161029082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 161029083 . G . PASS END=161029083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:27,0 chr2 161029084 . A . PASS END=161029087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,989:0,87,255:30,0 chr2 161029088 . T . PASS END=161029088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr2 161029089 . T . PASS END=161029092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr2 161029093 . A . PASS END=161029093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 161029094 . T . PASS END=161029180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:30:0,87,1294:0,90,255:40,0 chr2 161029181 . A . PASS END=161029217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:32:0,81,1097:0,82,255:40,0 chr2 161029218 . G A, 50.00 PASS DP=31;MQ=250.00;MQRankSum=4.704;ReadPosRankSum=3.354;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,17,0:0.548,0.000:31:6,8,0:8,9,0:48:85,0,49,579,501,1080:255,0,255:12,0:5.0000e+01,6.8081e-05,5.2446e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,7,10:5,9,8,9 chr2 161029219 . T . PASS END=161029219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:27,0 chr2 161029220 . C . PASS END=161029229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 161029230 . G . PASS END=161029230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 161029231 . C . PASS END=161029233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 161029234 . A . PASS END=161029234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,1 chr2 161029235 . T . PASS END=161029235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:19:29:0,19,916:0,19,255:25,1 chr2 161029236 . T . PASS END=161029236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:27,0 chr2 161029237 . T . PASS END=161029241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,942:0,70,255:24,0 chr2 161030485 . C . PASS END=161030650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:51:0,108,1620:0,114,255:40,0 chr2 161051880 . C . PASS END=161051880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1315:0,78,255:37,0 chr2 161051881 . T . PASS END=161052101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1189:0,83,255:40,0 chr2 161052102 . T . PASS END=161052112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:25,0 chr2 161052113 . A . PASS END=161052126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:18,0 chr2 161052727 . C . PASS END=161052931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:32:0,83,1178:0,83,255:40,1 chr2 161055690 . C . PASS END=161055769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:41:0,108,1620:0,123,255:40,0 chr2 161056514 . C . PASS END=161056574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:75:0,120,1800:0,213,255:40,0 chr2 161132148 . T . PASS END=161132225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:45:0,105,1627:0,105,255:40,0 chr2 161133814 . C . PASS END=161133894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:42:0,90,1537:0,90,255:40,0 chr2 161135059 . T . PASS END=161135152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:38:0,89,1350:0,89,255:40,0 chr2 161135153 . G . PASS END=161135169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:27:0,63,945:0,81,255:26,0 chr2 161137825 . A . PASS END=161137875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:51:0,120,1800:0,153,255:40,0 chr2 161138768 . C . PASS END=161138815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,190,255:40,0 chr2 161141286 . C . PASS END=161141379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,119,1598:0,119,255:40,0 chr2 161141506 . C . PASS END=161141555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,127,255:40,0 chr2 161143480 . A . PASS END=161143481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:65:33:0,65,855:0,65,255:31,0 chr2 161143482 . G . PASS END=161143483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:85:34:0,85,1103:0,85,255:35,0 chr2 161143484 . C . PASS END=161143484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:43:37:0,43,793:0,43,255:33,0 chr2 161143485 . T . PASS END=161143485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:34,0 chr2 161143486 . C . PASS END=161143486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,989:0,58,255:32,0 chr2 161143487 . A . PASS END=161143487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1094:0,91,255:34,0 chr2 161143488 . C . PASS END=161143488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,945:0,58,255:32,0 chr2 161143489 . C . PASS END=161143489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1098:0,77,255:34,0 chr2 161143490 . T . PASS END=161143490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 161143491 . C . PASS END=161143491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1142:0,56,255:36,0 chr2 161143492 . T . PASS END=161143494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:41:0,90,1275:0,90,255:40,0 chr2 161143495 . T . PASS END=161143495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,5:44:49:44:0,49,1284:0,49,255:39,0 chr2 161143496 . T . PASS END=161143497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:46:0,120,1800:0,121,255:40,0 chr2 161143498 . T . PASS END=161143498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1391:0,74,255:40,0 chr2 161143499 . C . PASS END=161143595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:43:0,91,1553:0,91,255:40,0 chr2 161157162 . C . PASS END=161157241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:80:0,120,1800:0,217,255:40,0 chr2 161159841 . C . PASS END=161159841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 161159842 . T . PASS END=161159998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:31:0,93,1109:0,93,255:40,0 chr2 161169667 . C . PASS END=161169758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,991:0,80,255:37,0 chr2 161174680 . C . PASS END=161174692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,4:82:99:77:0,120,1800:0,147,255:40,0 chr2 161174693 . C T, 49.26 PASS DP=75;MQ=247.05;MQRankSum=6.035;ReadPosRankSum=1.153;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,33,0:0.446,0.000:74:22,18,0:19,15,0:47:84,0,47,184,184,184:255,0,255:21,0:4.9259e+01,9.5003e-05,5.0000e+01,1.8403e+02,2.1880e+02,1.8704e+02:0.00,34.77,37.78,34.77,69.54,37.78:29,12,24,9:28,13,17,16 chr2 161174694 . G . PASS END=161174713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:82:0,120,1800:0,149,255:40,0 chr2 161174714 . C . PASS END=161174714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,8:83:66:83:0,66,2580:0,66,255:40,0 chr2 161174715 . T . PASS END=161174721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,3:83:93:82:0,93,1800:0,93,255:40,0 chr2 161174722 . A . PASS END=161174722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,9:81:43:81:0,43,2248:0,43,255:37,0 chr2 161174723 . G . PASS END=161174723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,7:81:76:81:0,76,2410:0,76,255:31,0 chr2 161174724 . A . PASS END=161174733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:81:78:0,81,1215:0,81,255:32,1 chr2 161174734 . C . PASS END=161174735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,5:71:78:69:0,78,1170:0,79,255:26,0 chr2 161174736 . T . LowGQ END=161174736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,10:67:0:67:0,0,1574:2,0,255:17,0 chr2 161174737 . A . PASS END=161174737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,3:67:60:67:0,60,900:0,84,255:18,3 chr2 161174738 . T . LowGQ END=161174738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,12:69:0:69:0,0,1650:61,0,255:15,3 chr2 161223727 . G . PASS END=161223902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:45:0,118,1457:0,118,255:40,0 chr2 161224023 . T . PASS END=161224037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:95:0,120,1800:0,255,255:40,0 chr2 161263975 . C . PASS END=161263975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 161263976 . T . PASS END=161263976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 161263977 . G . PASS END=161264013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 161264014 . G . PASS END=161264029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:6,0 chr2 161264030 . C . PASS END=161264043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:2:0,6,78:0,6,78:2,0 chr2 161349800 . C . PASS END=161349874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:39:0,92,1238:0,92,255:40,0 chr2 162017305 . A . PASS END=162017305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:36,0 chr2 162017306 . T . PASS END=162017333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,105,1541:0,110,255:40,0 chr2 162017799 . A . PASS END=162017923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:79:0,120,1800:0,208,255:40,0 chr2 162019850 . A . PASS END=162019869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:36:0,85,1275:0,85,255:40,0 chr2 162019873 . A . PASS END=162019964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,108,1620:0,108,255:40,0 chr2 162033726 . A . PASS END=162033763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,156,255:40,0 chr2 162036125 . A . PASS END=162036272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:46:0,102,1530:0,103,255:40,2 chr2 162059374 . T . PASS END=162059385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,103,1722:0,103,255:40,0 chr2 162059995 . C . PASS END=162060006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,156,255:40,0 chr2 162060007 . T . PASS END=162060106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:50:0,90,1350:0,137,255:40,0 chr2 162061186 . A . PASS END=162061337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:53:0,120,1800:0,143,255:40,0 chr2 162072900 . C . PASS END=162072936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:17,0 chr2 162072937 . T . PASS END=162072944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 162072945 . T . PASS END=162072945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 162072946 . C . PASS END=162072950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 162076235 . C . PASS END=162076294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:36:0,96,1440:0,108,255:40,0 chr2 162080426 . G . PASS END=162080502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:62:0,120,1800:0,153,255:40,0 chr2 162081142 . G . PASS END=162081171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,161,255:40,0 chr2 162081172 . G . PASS END=162081257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:49:0,108,1656:0,108,255:40,0 chr2 162087482 . A . PASS END=162087483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 162087484 . A . PASS END=162087484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 162087485 . C . PASS END=162087490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,675:0,48,255:18,0 chr2 162087491 . G . PASS END=162087495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,869:0,63,255:23,0 chr2 162087496 . G . PASS END=162087775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:33:0,81,1166:0,85,255:40,1 chr2 162087776 . A . PASS END=162087776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 162087777 . G . PASS END=162087989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1215:0,91,255:40,0 chr2 162087990 . A . PASS END=162087990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 162087991 . C . PASS END=162088012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr2 162088013 . C . PASS END=162088013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,2 chr2 162088014 . T . PASS END=162088014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:29:33:0,29,1049:0,29,255:29,2 chr2 162088015 . T . PASS END=162088015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr2 162088016 . T . PASS END=162088029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1139:0,80,255:30,0 chr2 162088030 . T . PASS END=162088030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 162088031 . C . PASS END=162088039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 162088040 . A . PASS END=162088054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,939:0,67,255:26,0 chr2 162088055 . C . PASS END=162088062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,69,255:19,0 chr2 162089244 . T . PASS END=162089356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,147,255:40,0 chr2 162091853 . C . PASS END=162091873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:36,0 chr2 162091874 . A . PASS END=162092022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:38:0,81,1215:0,100,255:40,0 chr2 162092023 . G . PASS END=162092024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 162092025 . C . PASS END=162092028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:27,0 chr2 162092029 . A . PASS END=162092029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 162175337 . A . PASS END=162175384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,143,255:40,0 chr2 162223989 . G . PASS END=162224060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,150,255:40,0 chr2 162224295 . A . PASS END=162224414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,102,1530:0,129,255:40,0 chr2 162226618 . G . PASS END=162226688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1800:0,142,255:40,0 chr2 162227683 . G . PASS END=162227805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:37:0,84,1260:0,98,255:40,0 chr2 162227806 . G . PASS END=162227815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:25,0 chr2 162227816 . C . PASS END=162227828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr2 162227829 . G . PASS END=162227833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:13,0 chr2 162241975 . G . PASS END=162242082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,174,255:40,0 chr2 162247615 . G . PASS END=162247689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:80:0,120,1800:0,200,255:40,0 chr2 162251589 . A . PASS END=162251712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:37:0,87,1335:0,87,255:40,0 chr2 162251713 . A . PASS END=162251713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:35,0 chr2 162251714 . G . PASS END=162251714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1335:0,95,255:36,0 chr2 162265348 . G . PASS END=162265410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,145,255:40,0 chr2 162267813 . G . PASS END=162267911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:46:0,120,1800:0,125,255:40,0 chr2 162272922 . A . PASS END=162272934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr2 162272935 . A . PASS END=162272936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 162272937 . T . PASS END=162272938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 162272939 . C . PASS END=162272939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 162272940 . C . PASS END=162272945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,703:0,66,255:22,0 chr2 162272946 . C . PASS END=162272946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 162272947 . C . PASS END=162272951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,848:0,62,255:26,0 chr2 162272952 . A . PASS END=162272953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 162272954 . C . PASS END=162272954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 162272955 . A . PASS END=162272957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 162272958 . C . PASS END=162272958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 162272959 . T . PASS END=162272961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 162272962 . C . PASS END=162272966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 162272967 . A . PASS END=162272967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,864:0,50,255:24,0 chr2 162272968 . A . PASS END=162272972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 162272973 . C . PASS END=162272973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 162272974 . T . PASS END=162272976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 162272977 . A . PASS END=162272977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 162272978 . T . PASS END=162272978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 162272979 . G . PASS END=162272981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 162272982 . A . PASS END=162272982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 162272983 . G . PASS END=162272984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 162272985 . A . PASS END=162272986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 162272987 . C . PASS END=162272990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 162272991 . T . PASS END=162272991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 162272992 . A . PASS END=162273002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1194:0,83,255:33,0 chr2 162273003 . G . PASS END=162273003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:30,0 chr2 162273004 . G . PASS END=162273077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1178:0,83,255:40,2 chr2 162273078 . A . PASS END=162273078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:43:0,60,1466:0,60,255:40,2 chr2 162273079 . A . PASS END=162273160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1317:0,84,255:40,0 chr2 162273161 . A . PASS END=162273161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1209:0,54,255:31,0 chr2 162273162 . A . PASS END=162273217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:35:0,83,1216:0,83,255:37,0 chr2 162273218 . C . PASS END=162273218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 162273219 . T . PASS END=162273272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1319:0,92,255:38,0 chr2 162273273 . A . PASS END=162273273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1255:0,64,255:34,0 chr2 162273274 . C . PASS END=162273283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1396:0,98,255:39,0 chr2 162273284 . T . PASS END=162273284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:37,0 chr2 162273285 . G . PASS END=162273348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:36:0,93,1349:0,98,255:39,0 chr2 162273349 . G . PASS END=162273349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:31,0 chr2 162273350 . C . PASS END=162273351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:38:0,96,1440:0,114,255:32,0 chr2 162273352 . G . PASS END=162273355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr2 162273356 . C . PASS END=162273372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr2 162273373 . T . PASS END=162273373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 162273374 . C . PASS END=162273384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 162273385 . G . PASS END=162273386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:31:0,78,1170:0,80,255:26,0 chr2 162273387 . G . PASS END=162273406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:31,0 chr2 162273407 . C . PASS END=162273407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 162273408 . A . PASS END=162273434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 162273435 . G . PASS END=162273451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:25,0 chr2 162273452 . A . PASS END=162273452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr2 162273453 . C . PASS END=162273460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:24,0 chr2 162273461 . C . PASS END=162273461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr2 162273462 . G . PASS END=162273473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,930:0,72,255:24,0 chr2 162273474 . C . PASS END=162273474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 162273475 . A . PASS END=162273483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 162273484 . C . PASS END=162273497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 162273498 . T . PASS END=162273503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 162273504 . A . PASS END=162273504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 162273505 . C . PASS END=162273516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 162273517 . T . PASS END=162273532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,631:0,57,255:19,0 chr2 162273533 . A . PASS END=162273533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:27:19:0,27,405:0,57,255:9,0 chr2 162273534 . C . PASS END=162273534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:20:0,30,450:0,60,255:10,0 chr2 162273535 . A . PASS END=162273535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:27:20:0,27,405:0,60,255:9,0 chr2 162273536 . G . PASS END=162273544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:36:14:0,36,540:0,42,255:13,0 chr2 162273545 . G . PASS END=162273582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 162273583 . A . PASS END=162273586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 162273587 . G . PASS END=162273587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:12,0 chr2 162273588 . G . PASS END=162273596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 162273597 . A . PASS END=162273598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 162273599 . C . PASS END=162273602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 162273603 . A . PASS END=162273603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,427:0,11,255:10,0 chr2 162273604 . A . PASS END=162273606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 162273607 . A . PASS END=162273607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr2 162273608 . G . PASS END=162273608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 162273609 . G . PASS END=162273609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 162273610 . G . PASS END=162273613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 162274187 . G . PASS END=162274190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,840:0,75,255:25,0 chr2 162274191 . A . PASS END=162274191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,860:0,44,255:24,0 chr2 162274192 . T . PASS END=162274193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 162274194 . T . PASS END=162274198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 162274199 . T . PASS END=162274199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 162274200 . T . PASS END=162274204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 162274205 . A . PASS END=162274205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:27,0 chr2 162274206 . A . PASS END=162274213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 162274214 . C . PASS END=162274215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,966:0,73,255:29,0 chr2 162274216 . T . PASS END=162274217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 162274218 . T . PASS END=162274218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 162274219 . C . PASS END=162274220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 162274221 . G . PASS END=162274221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 162274222 . G . PASS END=162274222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 162274223 . T . PASS END=162274223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:29,0 chr2 162274224 . C . PASS END=162274249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:32:0,93,1291:0,96,255:37,0 chr2 162274250 . T . PASS END=162274250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1300:0,78,255:35,0 chr2 162274251 . T . PASS END=162274324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1143:0,83,255:37,0 chr2 162274325 . G . PASS END=162274325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:30,0 chr2 162274326 . G . PASS END=162274332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:32,0 chr2 162274333 . A . PASS END=162274341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:31:0,66,990:0,74,255:24,0 chr2 162274712 . G . PASS END=162274833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,99,1429:0,117,255:40,0 chr2 162275403 . A . PASS END=162275439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:26,0 chr2 162275440 . G . PASS END=162275441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 162275442 . C . PASS END=162275453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 162275454 . G . PASS END=162275454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 162275455 . A . PASS END=162275498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 162275499 . G . PASS END=162275520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 162275521 . A . PASS END=162275521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 162275522 . G . PASS END=162275543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 162275544 . G . PASS END=162275544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 162275545 . C . PASS END=162275549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 162275550 . C . PASS END=162275561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,495:0,31,255:13,0 chr2 162276707 . A . PASS END=162276768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:94:0,120,1800:0,255,255:40,0 chr2 162279876 . G . PASS END=162279876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 162279880 . G . PASS END=162279889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 162279890 . G . PASS END=162279894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:23,0 chr2 162279895 . T . PASS END=162279895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 162279896 . G . PASS END=162279900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 162279901 . G . PASS END=162279908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:28,0 chr2 162279909 . T . PASS END=162279909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 162279910 . G . PASS END=162279954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:29,0 chr2 162279955 . G . PASS END=162279980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:24,0 chr2 162279981 . T . PASS END=162279988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 162279989 . G . PASS END=162279991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 162279992 . C . PASS END=162279999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 162280000 . G . PASS END=162280005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 162280006 . C . PASS END=162280015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:18,0 chr2 162280016 . G . PASS END=162280016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 162280017 . C . PASS END=162280027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 162280028 . C . PASS END=162280039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 162280040 . G . PASS END=162280040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:11,0 chr2 162280041 . C . PASS END=162280042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 162280043 . G . PASS END=162280045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 162280046 . C . PASS END=162280046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 162280047 . C . PASS END=162280067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 162280068 . G . PASS END=162280069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 162280070 . G . PASS END=162280070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 162280071 . T . PASS END=162280087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 162280088 . C . PASS END=162280088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 162280089 . T . PASS END=162280103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 162280104 . A . PASS END=162280104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 162280105 . G . PASS END=162280111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 162280112 . G . PASS END=162280112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 162280113 . A . PASS END=162280136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 162280137 . G . PASS END=162280137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 162280138 . C . PASS END=162280139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr2 162280140 . G . PASS END=162280142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,374:0,25,255:12,0 chr2 162280143 . T . PASS END=162280143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 162280144 . T . PASS END=162280144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr2 162280145 . G . PASS END=162280153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,413:0,39,255:13,0 chr2 162280154 . G . PASS END=162280162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 162280163 . C . PASS END=162280171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 162280172 . T . PASS END=162280172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,405:0,3,255:12,0 chr2 162280173 . T . PASS END=162280182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 162280183 . G . PASS END=162280183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 162280184 . G . PASS END=162280187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 162280188 . A . PASS END=162280189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 162280190 . G . PASS END=162280193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 162280194 . C . PASS END=162280194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 162280195 . G . PASS END=162280195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 162280196 . G . PASS END=162280198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 162280199 . A . PASS END=162280202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 162280203 . A . PASS END=162280231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 162280232 . T . PASS END=162280232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,527:0,34,255:14,0 chr2 162280233 . C . PASS END=162280262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 162280263 . C . PASS END=162280263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 162280264 . G . PASS END=162280273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 162280274 . G . PASS END=162280291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:10:0,30,388:0,30,255:12,0 chr2 162280292 . C . PASS END=162280296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 162280297 . C . PASS END=162280297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 162280298 . G . PASS END=162280301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 162280302 . A . PASS END=162280317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,233:6,0 chr2 162280318 . G . PASS END=162280323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 162280324 . G . PASS END=162280324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 162280325 . G . PASS END=162280342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 162280343 . C . PASS END=162280381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,172:6,0 chr2 162280382 . T . LowGQ END=162280489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,3,39:2,0 chr2 162280490 . G . PASS END=162280570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,147:0,12,147:6,0 chr2 162280571 . G . PASS END=162280588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 162280589 . C . PASS END=162280590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 162280591 . G . PASS END=162280622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,243:0,24,243:9,0 chr2 162280623 . C . PASS END=162280664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 162280665 . T . PASS END=162280671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 162280672 . G . PASS END=162280672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr2 162280673 . C . PASS END=162280696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,303:0,27,255:9,0 chr2 162280697 . A . PASS END=162280697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:7,0 chr2 162280698 . A . PASS END=162280724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr2 162280725 . A . PASS END=162280738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,210:6,0 chr2 162481029 . A . PASS END=162481076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,114,1710:0,122,255:40,0 chr2 162565259 . A . PASS END=162565339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:57:0,120,1800:0,155,255:40,0 chr2 162567178 . A . PASS END=162567261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:70:0,120,1800:0,177,255:40,0 chr2 162627483 . A . PASS END=162627564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:71:0,120,1800:0,196,255:40,0 chr2 162660959 . G . PASS END=162661105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:29:0,86,1052:0,86,255:40,0 chr2 162696299 . A . PASS END=162696437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:36:0,95,1305:0,95,255:40,0 chr2 162711480 . G . PASS END=162711640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:43:0,117,1755:0,122,255:40,0 chr2 162719384 . A . PASS END=162719572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:43:0,111,1440:0,111,255:40,0 chr2 162728803 . C . PASS END=162728894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:56:0,120,1800:0,157,255:40,0 chr2 162730426 . G . PASS END=162730515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:49:0,120,1800:0,134,255:40,0 chr2 162735641 . G . PASS END=162735773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:32:0,81,1215:0,95,255:40,0 chr2 162735774 . T . PASS END=162735788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,892:0,61,255:25,0 chr2 162735789 . T . PASS END=162735789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,800:0,23,255:21,0 chr2 162735790 . C . PASS END=162735798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr2 162738867 . A . PASS END=162738954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:30:0,87,1125:0,90,255:40,0 chr2 162751189 . G . PASS END=162751317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:34:0,90,1350:0,102,255:40,0 chr2 162751318 . A . PASS END=162751318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr2 162751319 . A . PASS END=162751332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:34:0,84,1234:0,89,255:33,0 chr2 162751333 . C . PASS END=162751335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1035:0,66,255:23,0 chr2 162757421 . G . PASS END=162757426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1050:0,90,255:33,0 chr2 162757427 . A . PASS END=162757427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1019:0,66,255:31,0 chr2 162757428 . G . PASS END=162757433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1133:0,82,255:34,0 chr2 162757434 . T . PASS END=162757521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1177:0,80,255:40,0 chr2 162758538 . G . PASS END=162758595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:38:0,104,1379:0,104,255:40,0 chr2 162760514 . G . PASS END=162760654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:34:0,87,1305:0,94,255:40,0 chr2 162760655 . A . PASS END=162760657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 162760658 . A . PASS END=162760658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 162760659 . C . PASS END=162760677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:65:27:0,65,969:0,65,255:25,0 chr2 162760678 . A . PASS END=162760688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,630:0,62,255:19,0 chr2 162761286 . A . PASS END=162761419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:88:43:0,88,1566:0,88,255:40,0 chr2 162762152 . A . PASS END=162762391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:34:0,81,1210:0,84,255:40,0 chr2 162762392 . A . PASS END=162762397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:65:32:0,65,990:0,65,255:23,0 chr2 162799302 . G . PASS END=162799407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:40:0,104,1413:0,104,255:40,0 chr2 162804076 . G . PASS END=162804080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1210:0,102,255:35,0 chr2 162804081 . C . PASS END=162804081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr2 162804082 . A . PASS END=162804231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:32:0,83,1178:0,83,255:40,0 chr2 162804232 . A . PASS END=162804232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,991:0,79,255:29,0 chr2 162804233 . C . PASS END=162804237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 162805658 . G . PASS END=162805771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:55:0,120,1800:0,148,255:40,0 chr2 162807197 . C . PASS END=162807358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:39:0,90,1350:0,117,255:40,0 chr2 162813499 . A . PASS END=162813502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:26,0 chr2 162813503 . G . PASS END=162813737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:29:0,84,1260:0,87,255:40,0 chr2 162813738 . C . PASS END=162813748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:60:32:0,60,900:0,77,255:22,0 chr2 162813749 . A . PASS END=162813750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:26:0,42,855:0,42,255:20,0 chr2 162814997 . T . PASS END=162815065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:56:0,120,1800:0,147,255:40,0 chr2 162820645 . T . PASS END=162820818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:92:37:0,92,1347:0,92,255:40,0 chr2 162821561 . G . PASS END=162821563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:32,0 chr2 162821564 . T . PASS END=162821564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1148:0,60,255:32,0 chr2 162821565 . T . PASS END=162821587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1028:0,83,255:36,0 chr2 162821588 . T . PASS END=162821588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1217:0,78,255:34,0 chr2 162821589 . T . PASS END=162821683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:37:0,93,1303:0,93,255:40,0 chr2 162830759 . G . PASS END=162830826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:61:0,120,1800:0,144,255:40,0 chr2 162833270 . A . PASS END=162833386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:36:0,107,1220:0,107,255:40,0 chr2 162834232 . C . PASS END=162834244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:99:53:0,120,1800:0,138,255:40,0 chr2 162834254 . A . PASS END=162834260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,161,255:40,0 chr2 162839689 . C . PASS END=162839755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:60:0,120,1800:0,176,255:40,0 chr2 162849793 . C . PASS END=162849894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:56:0,108,1620:0,155,255:40,0 chr2 162851471 . C . PASS END=162851544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:47:0,120,1800:0,120,255:40,1 chr2 162851810 . C . PASS END=162851882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,120,1800:0,144,255:40,0 chr2 162862255 . T . PASS END=162862319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,103,1398:0,103,255:40,0 chr2 162865072 . C . PASS END=162865171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,102,1530:0,126,255:40,0 chr2 162865751 . C . PASS END=162865805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:95:0,120,1800:0,255,255:40,0 chr2 162868303 . C . PASS END=162868487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:43:0,87,1305:0,97,255:40,0 chr2 162868488 . G . PASS END=162868497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:34:0,60,900:0,81,255:25,0 chr2 162870906 . A . PASS END=162870975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,185,255:40,0 chr2 162873278 . T . PASS END=162873376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:53:0,120,1800:0,155,255:40,0 chr2 162873618 . C . PASS END=162873665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,119,1754:0,119,255:40,0 chr2 162875239 . C . PASS END=162875360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:96:42:0,96,1512:0,96,255:40,0 chr2 162875733 . T . PASS END=162875786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:83:0,120,1800:0,239,255:40,0 chr2 162876739 . A . PASS END=162876763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:95:59:0,95,1800:0,95,255:40,0 chr2 162876764 . T . PASS END=162876806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,102,1530:0,128,255:40,0 chr2 162877091 . T . PASS END=162877092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,118,1493:0,118,255:40,0 chr2 162877093 . T . PASS END=162877198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,104,1800:0,104,255:40,0 chr2 162879265 . T . PASS END=162879309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:73:0,120,1800:0,202,255:40,0 chr2 162881314 . C . PASS END=162881449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,110,1482:0,110,255:40,0 chr2 162890051 . C . PASS END=162890137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,120,1800:0,122,255:40,0 chr2 162890138 . T . PASS END=162890163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:55:0,120,1800:0,141,255:40,0 chr2 162891674 . C . PASS END=162891810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:98:36:0,98,1297:0,98,255:40,0 chr2 162891811 . C . PASS END=162891825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,99,1485:0,117,255:40,0 chr2 162891826 . A . PASS END=162891826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:32,0 chr2 162891827 . G . PASS END=162891834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1270:0,89,255:32,0 chr2 162894812 . C . PASS END=162894932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:93:33:0,93,1395:0,99,255:40,0 chr2 162895455 . T . PASS END=162895531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:41:0,93,1427:0,93,255:40,0 chr2 162895642 . C . PASS END=162895694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,119,1643:0,119,255:40,0 chr2 162902042 . C . PASS END=162902122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:72:0,120,1800:0,209,255:40,0 chr2 162903244 . T . PASS END=162903315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:89:0,120,1800:0,145,255:40,0 chr2 162903425 . A . PASS END=162903516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:69:0,120,1800:0,178,255:40,1 chr2 162903913 . C . PASS END=162903975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:56:0,120,1800:0,155,255:40,0 chr2 162903976 . T . PASS END=162904011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:71:0,120,1800:0,195,255:40,0 chr2 162929909 . T . PASS END=162929996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:39:0,86,1350:0,86,255:40,0 chr2 162930486 . C . PASS END=162930491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,953:0,62,255:25,0 chr2 162997960 . T . PASS END=162997960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 162999874 . T . PASS END=162999880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,242,255:40,0 chr2 163000415 . T . PASS END=163000421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,184,255:40,0 chr2 163000537 . C . PASS END=163000680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:39:0,93,1426:0,93,255:40,0 chr2 163002050 . T . PASS END=163002182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1240:0,98,255:40,0 chr2 163002183 . T . PASS END=163002185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 163002186 . T . PASS END=163002187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,92,255:27,0 chr2 163003863 . C . PASS END=163003884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,906:0,62,255:26,0 chr2 163003885 . A . PASS END=163003886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,906:0,84,255:29,0 chr2 163003887 . C . PASS END=163003887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 163003888 . A . PASS END=163003905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:29,0 chr2 163003906 . C . PASS END=163003906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 163003907 . A . PASS END=163004016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1155:0,80,255:40,0 chr2 163004017 . A . PASS END=163004020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:26,0 chr2 163004021 . T . PASS END=163004021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:23,0 chr2 163004022 . G . PASS END=163004024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,71,255:26,0 chr2 163005597 . C . PASS END=163005688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:52:0,99,1800:0,99,255:40,0 chr2 163027489 . T . PASS END=163027500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:45:0,96,1532:0,96,255:40,0 chr2 163027501 . A . PASS END=163027501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,6:49:47:49:0,47,1358:0,47,255:40,0 chr2 163027502 . G . PASS END=163027590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:51:0,102,1530:0,137,255:40,0 chr2 163029321 . C . PASS END=163029394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,146,255:40,0 chr2 163029648 . T . PASS END=163029731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,114,1710:0,129,255:40,0 chr2 163030233 . C . PASS END=163030297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:52:0,120,1800:0,156,255:40,0 chr2 163031377 . C . PASS END=163031447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:32:0,82,1141:0,82,255:38,0 chr2 163031448 . G . PASS END=163031448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 163031449 . C . PASS END=163031465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,105,255:36,0 chr2 163031466 . C . PASS END=163031466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 163031467 . C . PASS END=163031470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:28,0 chr2 163031471 . A . PASS END=163031473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,102,255:24,0 chr2 163031474 . G . PASS END=163031476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:57:33:0,57,855:0,99,255:19,0 chr2 163039924 . C . PASS END=163039978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:81:0,120,1800:0,219,255:40,0 chr2 163044679 . C . PASS END=163044711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:33:0,82,1180:0,82,255:39,0 chr2 163044712 . A . PASS END=163044712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1074:0,67,255:36,0 chr2 163044713 . C . PASS END=163044862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:35:0,90,1350:0,104,255:40,0 chr2 163044863 . G . PASS END=163044870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:32:0,60,900:0,86,255:26,0 chr2 163044871 . T . PASS END=163044873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:30:0,48,720:0,63,255:18,0 chr2 163045613 . A . PASS END=163045682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,3:103:99:87:0,120,1800:0,244,255:40,0 chr2 163046166 . T . PASS END=163046264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,150,255:40,0 chr2 163050665 . T . PASS END=163050690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:79:0,120,1800:0,192,255:40,0 chr2 163051211 . C . PASS END=163051258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:34:0,93,1303:0,93,255:40,0 chr2 163054225 . T . PASS END=163054250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,144,255:40,0 chr2 163054801 . T . PASS END=163054805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 163054806 . C . PASS END=163054807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 163054808 . C . PASS END=163054808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 163055267 . C . PASS END=163055391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,120,1800:0,134,255:40,0 chr2 163057076 . C . PASS END=163057129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:84:0,120,1800:0,223,255:40,0 chr2 163059382 . A . PASS END=163059452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:79:0,120,1800:0,231,255:40,0 chr2 163059551 . C . PASS END=163059655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:75:0,120,1800:0,170,255:40,0 chr2 163066462 . T . PASS END=163066506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:82:0,120,1800:0,247,255:40,0 chr2 163070448 . C . PASS END=163070567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:34:0,86,1238:0,86,255:40,0 chr2 163070568 . A . PASS END=163070568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,965:0,65,255:28,0 chr2 163070569 . C . PASS END=163070571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr2 163070572 . A . PASS END=163070583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,77,255:26,0 chr2 163072408 . C . PASS END=163072511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1205:0,86,255:40,0 chr2 163074496 . C . PASS END=163074650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:50:0,120,1800:0,124,255:40,0 chr2 163075573 . C . PASS END=163075693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:85:0,120,1800:0,242,255:40,0 chr2 163076363 . T . PASS END=163076435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,132,255:40,0 chr2 163078207 . T . PASS END=163078222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:58:0,120,1800:0,139,255:40,0 chr2 163080118 . C . PASS END=163080170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:81:0,120,1800:0,180,255:40,0 chr2 163080976 . C . PASS END=163081050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:99:0,120,1800:0,230,255:40,0 chr2 163081993 . C . PASS END=163082087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:80:0,120,1800:0,217,255:40,0 chr2 163083033 . C . PASS END=163083131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,132,255:40,0 chr2 163087426 . G . PASS END=163087486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,115,1529:0,115,255:40,0 chr2 163099418 . C . PASS END=163099502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:59:0,120,1800:0,161,255:40,0 chr2 163099506 . C . PASS END=163099508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 163099832 . C . PASS END=163099837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:90:0,120,1800:0,254,255:40,0 chr2 163123710 . C . PASS END=163123889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:52:0,118,1800:0,118,255:40,0 chr2 163123989 . C . PASS END=163124013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,198,255:40,0 chr2 163124014 . C . PASS END=163124050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,186,255:40,0 chr2 163124051 . C T, 256.30 PASS DP=70;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,42,0:0,28,0:206:294,209,0,2602,209,2602:255,213,0:0,0:2.5630e+02,2.0630e+02,0.0000e+00,4.5000e+02,2.4107e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,48:0,0,26,44 chr2 163124052 . T . PASS END=163124079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,120,255:40,1 chr2 163124597 . T . PASS END=163124787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:42:0,103,1662:0,103,255:40,0 chr2 163128730 . C . PASS END=163128730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 163128736 . C . PASS END=163128786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,99,1371:0,99,255:40,0 chr2 163128787 . A . PASS END=163128823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,149,255:40,0 chr2 163128824 . T C, 233.14 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,36,0:0,26,0:183:271,186,0,2375,186,2375:255,187,0:0,0:2.3314e+02,1.8314e+02,0.0000e+00,4.5000e+02,2.1791e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,36:0,0,28,34 chr2 163128825 . G . PASS END=163128861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,170,255:40,0 chr2 163128862 . G . PASS END=163128897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:30:0,81,1215:0,90,255:40,0 chr2 163130305 . C . PASS END=163130454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,155,255:40,0 chr2 163133197 . C . PASS END=163133212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 163133213 . A . PASS END=163133457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:27:0,81,1003:0,81,255:40,0 chr2 163133923 . A . PASS END=163133923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 163133925 . C . PASS END=163134203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:97:44:0,97,1426:0,97,255:40,0 chr2 163134206 . G . PASS END=163134206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 163134713 . A . PASS END=163134713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,120,255:40,0 chr2 163134715 . C . PASS END=163134839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,138,255:40,0 chr2 163136504 . A . PASS END=163136622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,108,1620:0,138,255:40,0 chr2 163137836 . A . PASS END=163137836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 163137838 . T . PASS END=163138055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:30:0,83,1038:0,83,255:40,0 chr2 163138876 . C . PASS END=163139083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:36:0,87,1305:0,93,255:40,0 chr2 163139084 . T . PASS END=163139084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 163139085 . A . PASS END=163139086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 163144644 . C . PASS END=163144855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:35:0,87,1297:0,89,255:40,0 chr2 163144856 . T . PASS END=163144865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:30:0,71,1125:0,71,255:26,0 chr2 163150074 . C . PASS END=163150178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:63:0,120,1800:0,185,255:40,0 chr2 163150188 . A . PASS END=163150188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 163163219 . C . PASS END=163163365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:86:39:0,86,1313:0,86,255:40,0 chr2 163167231 . C . PASS END=163167438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:81:34:0,81,1215:0,86,255:40,0 chr2 163167439 . G . PASS END=163167439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:26,0 chr2 163167440 . C . PASS END=163167442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 163167443 . T . PASS END=163167444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:26,0 chr2 163167447 . T . PASS END=163167447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr2 163174365 . C . PASS END=163174399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,560:0,45,255:21,0 chr2 163174400 . C . PASS END=163174400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 163174401 . C . PASS END=163174401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 163174402 . A . PASS END=163174414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr2 163174415 . A . PASS END=163174415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 163174416 . G . PASS END=163174434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,842:0,72,255:26,0 chr2 163174435 . T . PASS END=163174439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 163174440 . C . PASS END=163174443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 163174444 . A . PASS END=163174447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 163174448 . T . PASS END=163174475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:23:0,65,990:0,65,255:26,0 chr2 163174476 . A . PASS END=163174476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:21,0 chr2 163174477 . T . PASS END=163174485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,756:0,66,255:24,0 chr2 163174486 . T . PASS END=163174486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,800:0,41,255:23,0 chr2 163174487 . G . PASS END=163174511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,862:0,72,255:24,0 chr2 163174512 . C . PASS END=163174512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 163174513 . A . PASS END=163174516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,906:0,72,255:24,0 chr2 163174517 . C . PASS END=163174517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 163174518 . C . PASS END=163174525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,908:0,72,255:24,0 chr2 163174526 . C . PASS END=163174526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 163174527 . A . PASS END=163174527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 163174528 . G . PASS END=163174528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:19,0 chr2 163174529 . G . PASS END=163174536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:22,0 chr2 163174537 . T . PASS END=163174537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 163174538 . A . PASS END=163174540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 163174541 . G . PASS END=163174570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:19:0,40,590:0,40,255:19,0 chr2 163174571 . G . PASS END=163174573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 163174574 . C . PASS END=163174590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,629:0,43,255:19,0 chr2 163174591 . G . PASS END=163174594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 163174595 . A . PASS END=163174595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 163174596 . A . PASS END=163174599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 163174600 . A . PASS END=163174603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:19,0 chr2 163174604 . G . PASS END=163174604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 163174605 . C . PASS END=163174605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:19,0 chr2 163174606 . C . PASS END=163174613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:21,0 chr2 163174614 . C . PASS END=163174615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 163174616 . T . PASS END=163174620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 163174621 . A . PASS END=163174623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 163174624 . G . PASS END=163174634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 163174635 . C . PASS END=163174636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 163174637 . G . PASS END=163174668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:24,0 chr2 163174669 . A . PASS END=163174669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 163174670 . C . PASS END=163174714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,908:0,72,255:26,0 chr2 163174715 . G . PASS END=163174722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1125:0,84,255:30,0 chr2 163174723 . A . PASS END=163174723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1068:0,74,255:29,0 chr2 163174724 . G . PASS END=163174780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:32:0,80,1177:0,80,255:37,0 chr2 163174781 . A . PASS END=163174781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 163174782 . G . PASS END=163174782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr2 163174783 . C . PASS END=163174785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 163174786 . A . PASS END=163174804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,984:0,65,255:26,0 chr2 163174805 . A . PASS END=163174805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,831:0,31,255:21,0 chr2 163174806 . C . PASS END=163174815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 163174816 . A . PASS END=163174817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:24:0,55,807:0,55,255:19,0 chr2 163175645 . A . PASS END=163175749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1159:0,84,255:40,0 chr2 163175834 . A . PASS END=163175905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,143,255:40,0 chr2 163200759 . A . PASS END=163200773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,930:0,62,255:26,0 chr2 163200774 . T . PASS END=163200774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,870:0,47,255:21,0 chr2 163200775 . A . PASS END=163200781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,878:0,61,255:23,0 chr2 163200782 . A . PASS END=163200782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 163200783 . G . PASS END=163200785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:25,0 chr2 163204088 . T . PASS END=163204109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1001:0,87,255:29,0 chr2 163204110 . T . PASS END=163204110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 163204111 . G . PASS END=163204130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1186:0,83,255:36,0 chr2 163204131 . A . PASS END=163204131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr2 163204132 . G . PASS END=163204218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1215:0,92,255:40,0 chr2 163204219 . C . PASS END=163204239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,992:0,65,255:25,0 chr2 163204240 . T . PASS END=163204252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:20:0,44,675:0,44,255:19,0 chr2 163208848 . G . PASS END=163208855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:67:0,120,1800:0,188,255:40,0 chr2 163208856 . A . PASS END=163208892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,212,255:40,0 chr2 163208893 . T G, 50.00 PASS DP=77;MQ=250.00;MQRankSum=7.514;ReadPosRankSum=3.166;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,42,0:0.545,0.000:77:20,23,0:15,19,0:48:85,0,49,1473,1244,2717:255,0,255:32,0:5.0000e+01,6.8857e-05,5.2321e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,15,27,15:15,20,20,22 chr2 163208894 . C . PASS END=163208917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,3:72:99:64:0,120,1800:0,152,255:40,0 chr2 163212948 . C . PASS END=163212991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,2:98:99:95:0,120,1800:0,247,255:40,0 chr2 163213268 . A . PASS END=163213415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:45:0,102,1800:0,102,255:40,0 chr2 163215554 . G . PASS END=163215667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:54:0,120,1800:0,158,255:40,0 chr2 163216004 . A . PASS END=163216062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:75:0,120,1800:0,199,255:40,0 chr2 163216727 . T . PASS END=163216753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:96:0,120,1800:0,255,255:40,0 chr2 163217256 . A . PASS END=163217270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:103:0,120,1800:0,255,255:40,0 chr2 163227816 . T . PASS END=163227890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:69:0,120,1800:0,183,255:40,0 chr2 163228339 . T . PASS END=163228339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 163228340 . T . PASS END=163228340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:28,0 chr2 163228341 . A . PASS END=163228605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:29:0,80,1040:0,80,255:40,0 chr2 163229980 . T . PASS END=163230140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1196:0,93,255:40,0 chr2 163230141 . T . PASS END=163230141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,978:0,43,255:26,0 chr2 163230142 . C . PASS END=163230165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,764:0,66,255:23,0 chr2 163230166 . T . PASS END=163230166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 163230167 . T . PASS END=163230172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 163236363 . C . PASS END=163236520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:39:0,93,1395:0,104,255:40,0 chr2 163236521 . G . PASS END=163236531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:32:0,72,1080:0,89,255:25,0 chr2 163241198 . C . PASS END=163241427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:33:0,99,1173:0,99,255:40,0 chr2 163241428 . T . PASS END=163241428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:69:49:0,69,1643:0,69,255:36,0 chr2 163241429 . C . PASS END=163241448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:33:0,82,1036:0,82,255:38,0 chr2 163241449 . T . PASS END=163241449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:27,0 chr2 163250899 . C . PASS END=163250995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,182,255:40,0 chr2 163253250 . C . PASS END=163253251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:76:31:0,76,991:0,76,255:30,0 chr2 163253252 . T . PASS END=163253455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:31:0,80,1083:0,80,255:40,0 chr2 163256699 . C . PASS END=163256699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 163256700 . C . PASS END=163256705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 163256706 . A . PASS END=163256706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:25,0 chr2 163256707 . G . PASS END=163256707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 163256708 . C . PASS END=163256718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:30,0 chr2 163256719 . T . PASS END=163256719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr2 163256720 . C . PASS END=163256749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1065:0,86,255:34,0 chr2 163256750 . A . PASS END=163256750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:29,0 chr2 163256751 . T . PASS END=163256751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 163256752 . A . PASS END=163256752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:31,0 chr2 163256753 . A . PASS END=163256951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:86:34:0,86,1136:0,86,255:40,0 chr2 163279780 . T . PASS END=163279780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:32,0 chr2 163279781 . T . PASS END=163280045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:33:0,81,1176:0,94,255:40,0 chr2 163291700 . C . PASS END=163292107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:92:35:0,92,1302:0,92,255:40,0 chr2 163302528 . C . PASS END=163302864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:84:31:0,84,1260:0,93,255:40,0 chr2 163302865 . A . PASS END=163302865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1255:0,50,255:33,0 chr2 163302866 . A . PASS END=163302921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:83:34:0,83,1051:0,83,255:39,0 chr2 163302922 . T . PASS END=163302935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:24,0 chr2 163302936 . T . PASS END=163302953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,660:0,54,255:19,0 chr2 163360953 . C . PASS END=163360954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 163360955 . G . PASS END=163360955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,841:0,39,255:25,0 chr2 163360956 . G . PASS END=163360957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 163360958 . T . PASS END=163360959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 163360960 . A . PASS END=163360960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,933:0,53,255:27,0 chr2 163360961 . C . PASS END=163360962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 163360963 . T . PASS END=163360963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 163360964 . T . PASS END=163360964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,839:0,37,255:24,0 chr2 163360965 . C . PASS END=163360965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 163360966 . T . PASS END=163360966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:27,0 chr2 163360967 . C . PASS END=163360973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1350:0,96,255:40,0 chr2 163360974 . A . PASS END=163360974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1402:0,76,255:38,0 chr2 163360975 . T . PASS END=163361167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:40:0,102,1482:0,102,255:40,0 chr2 163368710 . C . PASS END=163368733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,249,255:40,0 chr2 163369164 . C . PASS END=163369184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:91:0,120,1800:0,255,255:40,0 chr2 163374240 . C . PASS END=163374248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,878:0,72,255:25,0 chr2 163374249 . C . PASS END=163374249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 163374250 . A . PASS END=163374259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,902:0,62,255:26,0 chr2 163374260 . C . PASS END=163374311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:29:0,86,1049:0,86,255:35,0 chr2 163374312 . A . PASS END=163374312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1211:0,77,255:32,0 chr2 163374313 . T . PASS END=163374394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:34:0,96,1243:0,96,255:40,0 chr2 163374395 . C . PASS END=163374402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,112,1800:0,112,255:40,0 chr2 163374403 . T . PASS END=163374403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,8:52:22:52:0,22,1216:0,22,255:40,0 chr2 163374404 . T . PASS END=163374404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 163374405 . G . PASS END=163374405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,5:52:72:52:0,72,1262:0,72,255:40,0 chr2 163374406 . C . PASS END=163374407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,105,1393:0,105,255:40,0 chr2 163374408 . T . LowGQ END=163374408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,11:52:0:52:0,0,923:72,0,255:38,0 chr2 163374409 . T . PASS END=163374411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:50:0,112,1622:0,112,255:40,0 chr2 163374412 . G . PASS END=163374412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:50:50:0,50,1217:0,50,255:39,0 chr2 163374413 . G . PASS END=163374416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:48:0,93,1203:0,93,255:40,0 chr2 163374417 . A . PASS END=163374417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:63:49:0,63,1233:0,63,255:40,0 chr2 163374418 . G . PASS END=163374419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,116,1379:0,116,255:40,0 chr2 163374420 . A . PASS END=163374420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:38:48:0,38,1168:0,38,255:40,0 chr2 163374421 . A . PASS END=163374421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 163374422 . T . PASS END=163374423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:76:47:0,76,1235:0,76,255:40,0 chr2 163374424 . G . PASS END=163374428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,110,1429:0,110,255:40,0 chr2 163374429 . G . LowGQ END=163374429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,11:48:0:48:0,0,947:61,0,255:33,0 chr2 163374430 . A . PASS END=163374430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:48:0,111,1581:0,111,255:40,0 chr2 163374431 . G . PASS END=163374431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:35:49:0,35,1221:0,35,255:40,0 chr2 163374432 . G . PASS END=163374438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:51:0,83,1484:0,83,255:40,0 chr2 163374439 . T . PASS END=163374439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:73:53:0,73,1608:0,73,255:40,0 chr2 163374440 . A . PASS END=163374441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:97:54:0,97,1505:0,97,255:40,0 chr2 163374442 . A . PASS END=163374442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:77:53:0,77,1385:0,77,255:40,0 chr2 163374443 . T . PASS END=163374444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,109,1606:0,109,255:40,0 chr2 163374445 . C . LowGQ END=163374445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,15:54:0:54:0,0,1028:146,0,255:38,0 chr2 163374446 . A . PASS END=163374450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,131,255:40,0 chr2 163374451 . G . LowGQ END=163374451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,9:55:0:55:0,0,1323:13,0,255:40,0 chr2 163374452 . G . PASS END=163374482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:80:55:0,80,1615:0,80,255:40,0 chr2 163374483 . T . PASS END=163374649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:32:0,86,1350:0,86,255:40,0 chr2 163374650 . T . PASS END=163374650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 163374651 . T . PASS END=163374668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 163393435 . G . PASS END=163393591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:49:0,120,1800:0,130,255:40,0 chr2 163394580 . T . PASS END=163394586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,241,255:40,0 chr2 163693047 . C . PASS END=163693059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:26,0 chr2 163693060 . G . PASS END=163693072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1020:0,84,255:30,0 chr2 163693073 . A . PASS END=163693073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 163693074 . C . PASS END=163693078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:34,0 chr2 163693079 . C . PASS END=163693079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:32,0 chr2 163693080 . T . PASS END=163693277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:35:0,84,1295:0,84,255:40,0 chr2 163694953 . T . PASS END=163694969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:34:0,94,1086:0,94,255:36,0 chr2 163694970 . C . PASS END=163694970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr2 163694971 . G . PASS END=163695017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1194:0,81,255:36,0 chr2 163695018 . C . PASS END=163695018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 163695019 . G . PASS END=163695020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 163695021 . A . PASS END=163695028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:27,0 chr2 164450242 . T . PASS END=164450306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,112,1782:0,112,255:40,0 chr2 164466062 . T . PASS END=164466085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,120,1800:0,126,255:40,0 chr2 164466086 . G . PASS END=164466893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:31:0,83,1164:0,83,255:40,0 chr2 164466894 . A . PASS END=164466894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:32,0 chr2 164466895 . C . PASS END=164466895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 164466896 . T . PASS END=164466896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:32,0 chr2 164466897 . G . PASS END=164467391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:31:0,81,1197:0,81,255:40,0 chr2 164467392 . T . PASS END=164467392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1218:0,75,255:33,0 chr2 164467393 . T . PASS END=164467395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1349:0,95,255:36,0 chr2 164467396 . G . PASS END=164467396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:35,0 chr2 164467397 . A . PASS END=164467401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1248:0,111,255:37,0 chr2 164467402 . T . PASS END=164467402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1239:0,78,255:35,0 chr2 164467403 . T . PASS END=164467404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:37:0,81,1246:0,81,255:37,0 chr2 164467405 . C . PASS END=164467405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1258:0,37,255:36,0 chr2 164467406 . T . PASS END=164467421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1191:0,81,255:38,0 chr2 164467422 . G . PASS END=164467422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:32,0 chr2 164467423 . C . PASS END=164467434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:34:0,84,1144:0,88,255:33,0 chr2 164467435 . T . PASS END=164467437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1170:0,67,255:27,0 chr2 164467438 . G . PASS END=164467438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 164467439 . T . PASS END=164467439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1080:0,69,255:25,0 chr2 164467440 . G . PASS END=164467442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1172:0,83,255:27,0 chr2 164467443 . A . PASS END=164467445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,1105:0,60,255:26,0 chr2 164467446 . C . PASS END=164467447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1157:0,82,255:29,0 chr2 164467448 . A . PASS END=164467453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,1047:0,63,255:27,0 chr2 164467454 . C . PASS END=164467454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,939:0,35,255:24,0 chr2 164467455 . T . PASS END=164467455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:24,0 chr2 164467456 . G . PASS END=164467463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:27:0,67,962:0,67,255:26,0 chr2 164467464 . T . PASS END=164467464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:22,0 chr2 164467465 . A . PASS END=164467468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,972:0,70,255:24,0 chr2 164467469 . A . PASS END=164467469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,870:0,51,255:20,0 chr2 164467470 . G . PASS END=164467470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 164467471 . G . PASS END=164467471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,878:0,51,255:21,0 chr2 164467472 . A . PASS END=164467474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,848:0,64,255:23,0 chr2 164467475 . A . PASS END=164467475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,737:0,28,255:20,0 chr2 164467476 . G . PASS END=164467476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 164467477 . T . PASS END=164467477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,829:0,26,255:22,0 chr2 164467478 . G . PASS END=164467479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 164467480 . T . PASS END=164467480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,714:0,25,255:17,0 chr2 164467481 . G . PASS END=164467485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 164467486 . G . PASS END=164467486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,805:0,42,255:22,0 chr2 164467487 . T . PASS END=164467487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,781:0,64,255:22,0 chr2 164467488 . A . PASS END=164467488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,701:0,31,255:20,0 chr2 164467489 . G . PASS END=164467494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr2 164467495 . T . PASS END=164467495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,617:0,25,255:22,0 chr2 164467496 . G . PASS END=164467498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,864:0,64,255:26,0 chr2 164467499 . A . PASS END=164467501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 164467502 . A . PASS END=164467502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 164467503 . G . PASS END=164467508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 164467509 . C . PASS END=164467513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 164467514 . A . PASS END=164467514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:25,0 chr2 164467515 . G . PASS END=164467515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr2 164467516 . G . PASS END=164467605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1235:0,89,255:35,0 chr2 164467606 . T . PASS END=164467606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 164467607 . G . PASS END=164467630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:35:0,94,1280:0,94,255:35,0 chr2 164467631 . A . PASS END=164467631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:30,0 chr2 164467632 . T . PASS END=164467663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1278:0,89,255:35,0 chr2 164467664 . A . PASS END=164467664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:33,0 chr2 164467665 . G . PASS END=164468287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,84,255:40,0 chr2 164468288 . A . PASS END=164468314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:23:0,63,931:0,64,255:26,0 chr2 164468315 . G . PASS END=164468315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 164468316 . C . PASS END=164468316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 164468839 . C . PASS END=164468941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:52:0,120,1800:0,145,255:40,0 chr2 164591413 . C . PASS END=164591437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:94:48:0,94,1415:0,94,255:40,0 chr2 165349546 . C . PASS END=165349692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:57:0,120,1800:0,150,255:40,0 chr2 165350941 . T . PASS END=165351034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,120,1800:0,128,255:40,0 chr2 165353518 . C . PASS END=165353605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:84:66:0,84,1800:0,84,255:40,0 chr2 165353721 . C . PASS END=165353749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,165,255:40,0 chr2 165353750 . G . PASS END=165353793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,143,255:40,2 chr2 165353884 . C . PASS END=165353996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:43:0,96,1485:0,96,255:40,0 chr2 165353997 . T . PASS END=165353997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1427:0,71,255:34,0 chr2 165353998 . T . PASS END=165354000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:91:36:0,91,1124:0,91,255:35,0 chr2 165358765 . C . PASS END=165358845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,102,1530:0,125,255:40,0 chr2 165364965 . C . PASS END=165365060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,142,255:40,0 chr2 165365240 . T . PASS END=165365362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:45:0,106,1707:0,106,255:40,1 chr2 165378490 . C . PASS END=165378627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:58:0,120,1800:0,148,255:40,0 chr2 165381514 . C . PASS END=165381588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:78:0,120,1800:0,195,255:40,2 chr2 165383524 . C . PASS END=165383645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:52:0,111,1800:0,111,255:40,0 chr2 165404170 . C . PASS END=165404314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:90:49:0,90,1350:0,134,255:40,0 chr2 165404315 . T . PASS END=165404325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:63:31:0,63,945:0,93,255:25,0 chr2 165404326 . C . PASS END=165404326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,855:0,74,255:18,0 chr2 165424825 . C . PASS END=165424836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,120,1800:0,164,255:40,0 chr2 165424837 . A G, 49.94 PASS DP=62;MQ=250.00;MQRankSum=6.754;ReadPosRankSum=2.655;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,30,0:0.484,0.000:62:17,18,0:15,12,0:48:85,0,50,1073,1078,2151:255,0,255:32,0:4.9941e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,17,19,11:18,14,13,17 chr2 165424838 . A . PASS END=165424874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,185,255:40,0 chr2 165424875 . C . PASS END=165424887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,145,255:40,0 chr2 165476197 . C . PASS END=165476215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:41:0,91,1504:0,91,255:40,0 chr2 165476216 . G . PASS END=165476252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,109,1568:0,109,255:40,0 chr2 165476253 . A T, 49.83 PASS DP=57;MQ=250.00;MQRankSum=6.465;ReadPosRankSum=2.645;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,27,0:0.474,0.000:57:13,18,0:17,9,0:47:85,0,47,185,185,185:255,0,255:30,0:4.9829e+01,8.8531e-05,5.0000e+01,1.8460e+02,2.1937e+02,1.8761e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,21,20,7:14,16,13,14 chr2 165476254 . T . PASS END=165476290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,147,255:40,0 chr2 165476291 . G . PASS END=165476343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:40:0,81,1215:0,89,255:40,0 chr2 165476344 . C . PASS END=165476344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,114,255:25,0 chr2 165477629 . C . PASS END=165477632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,853:0,66,255:25,0 chr2 165477633 . C . PASS END=165477650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr2 165477651 . T . PASS END=165477651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 165477652 . C . PASS END=165477662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1103:0,90,255:30,0 chr2 165477663 . G . PASS END=165477663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 165477664 . G . PASS END=165477677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 165477678 . G . PASS END=165477678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 165477679 . C . PASS END=165477690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 165477691 . G . PASS END=165477691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 165477692 . G . PASS END=165477697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1109:0,90,255:30,0 chr2 165477698 . G . PASS END=165477698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:28,0 chr2 165477699 . G . PASS END=165477717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 165477718 . G . PASS END=165477718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 165477719 . C . PASS END=165477720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 165477721 . C . PASS END=165477733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:24:0,69,1035:0,71,255:24,0 chr2 165477734 . G . PASS END=165477736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,810:0,56,255:19,0 chr2 165477737 . C . PASS END=165477738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:21,0 chr2 165477739 . A . PASS END=165477760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:19,0 chr2 165477761 . G . PASS END=165477767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:17:0,33,495:0,51,255:13,0 chr2 165477768 . G . PASS END=165477768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:12,0 chr2 165477769 . G . PASS END=165477773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:15:0,36,540:0,45,255:13,0 chr2 165477774 . C . PASS END=165477783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr2 165477784 . C . PASS END=165477801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,372:0,33,255:13,0 chr2 165477802 . T . PASS END=165477819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 165522403 . T . PASS END=165522411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,146,255:40,0 chr2 165542456 . T . PASS END=165542542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,146,255:40,0 chr2 165548731 . C . PASS END=165548752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,115,1487:0,115,255:40,0 chr2 165548753 . T . PASS END=165548753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1416:0,66,255:39,0 chr2 165548754 . C . PASS END=165548902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:36:0,81,1215:0,92,255:40,0 chr2 165548903 . T . PASS END=165548904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1125:0,75,255:25,0 chr2 165548905 . T . PASS END=165548907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,98,255:28,0 chr2 165550779 . C . PASS END=165550779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 165550780 . T . PASS END=165551163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:31:0,93,1109:0,93,255:40,0 chr2 165551164 . T . PASS END=165551200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,111,1545:0,111,255:40,0 chr2 165551201 . T C, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.722;ReadPosRankSum=4.357;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,24,0:0.533,0.000:45:5,14,0:16,10,0:48:85,0,50,857,743,1600:255,0,255:17,0:5.0000e+01,6.7304e-05,5.2614e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,14,10:13,8,14,10 chr2 165551202 . T . PASS END=165551238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:43:0,80,1546:0,80,255:40,0 chr2 165551239 . A . PASS END=165552308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:91:44:0,91,1406:0,91,255:40,0 chr2 165552309 . T . PASS END=165552338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:42:0,87,1305:0,109,255:40,0 chr2 165552339 . T . PASS END=165552346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:63:42:0,63,945:0,110,255:24,0 chr2 165555915 . C . PASS END=165556009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:40:0,108,1620:0,120,255:40,0 chr2 165557032 . T . PASS END=165557266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:39:0,101,1426:0,101,255:40,3 chr2 165559614 . A . PASS END=165559730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:37:0,83,1238:0,83,255:40,0 chr2 165560171 . C . PASS END=165560181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,200,255:40,0 chr2 165560954 . C . PASS END=165561028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,110,1573:0,110,255:40,0 chr2 165561462 . C . PASS END=165561546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1219:0,81,255:40,0 chr2 165561547 . T . PASS END=165561547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:32,0 chr2 165561548 . G . PASS END=165561585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,86,255:34,0 chr2 165561586 . T . PASS END=165561591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,87,255:23,0 chr2 165561592 . C . PASS END=165561603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:21:0,45,675:0,53,255:18,0 chr2 165561604 . T . PASS END=165561615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:16:0,36,540:0,48,255:13,0 chr2 165578585 . C . PASS END=165578591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr2 165578592 . G . PASS END=165578592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 165578593 . T . PASS END=165578594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 165578595 . T . PASS END=165578595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 165578596 . C . PASS END=165578598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 165578599 . C . PASS END=165578599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 165578600 . C . PASS END=165578602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr2 165578603 . G . PASS END=165578603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 165578604 . C . PASS END=165578608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,811:0,69,255:24,0 chr2 165578609 . G . PASS END=165578609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:22,0 chr2 165578610 . G . PASS END=165578618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 165578619 . A . PASS END=165578619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:27,0 chr2 165578620 . T . PASS END=165578620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,856:0,29,255:25,0 chr2 165578621 . A . PASS END=165578625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,938:0,65,255:26,0 chr2 165578626 . A . PASS END=165578634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 165578635 . T . PASS END=165578635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:26,0 chr2 165578636 . C . PASS END=165578636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 165578637 . T . PASS END=165578637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 165578638 . C . PASS END=165578642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 165578643 . A . PASS END=165578643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:28,0 chr2 165578644 . T . PASS END=165578648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 165578649 . G . PASS END=165578649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,959:0,40,255:26,0 chr2 165578650 . C . PASS END=165578650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 165578651 . A . PASS END=165578657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 165578658 . T . PASS END=165578658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:28,0 chr2 165578659 . G . PASS END=165578660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1153:0,80,255:29,0 chr2 165578661 . G . PASS END=165578661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr2 165578662 . G . PASS END=165578669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1141:0,93,255:33,0 chr2 165578670 . T . PASS END=165578670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr2 165578671 . G . PASS END=165578821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:32:0,86,1201:0,86,255:40,0 chr2 165578935 . T . PASS END=165579027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:69:0,120,1800:0,144,255:40,1 chr2 165579028 . G . PASS END=165579032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:64:0,120,1800:0,176,255:40,0 chr2 165583616 . C . PASS END=165583654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:84:0,120,1800:0,211,255:40,0 chr2 165584479 . C . PASS END=165584671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1155:0,80,255:40,0 chr2 165584672 . T . PASS END=165584672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 165584673 . G . PASS END=165584684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 165584685 . T . PASS END=165584689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:26,0 chr2 165584690 . C . PASS END=165584692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 165584693 . T . PASS END=165584693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr2 165584694 . A . PASS END=165584700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 165584701 . C . PASS END=165584701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 165584702 . A . PASS END=165584702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 165584703 . G . PASS END=165584707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,969:0,65,255:26,0 chr2 165586424 . C . PASS END=165586428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,153,255:40,0 chr2 165586429 . G . PASS END=165586465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,162,255:40,2 chr2 165586466 . T C, 50.00 PASS DP=77;MQ=250.00;MQRankSum=7.514;ReadPosRankSum=6.184;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,42,0:0.545,0.000:77:20,20,0:15,22,0:48:85,0,49,1494,1244,2738:255,0,255:33,0:5.0000e+01,6.9116e-05,5.2283e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,16,24,18:18,17,26,16 chr2 165586467 . G . PASS END=165586503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,210,255:40,0 chr2 165586504 . T . PASS END=165586614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:36:0,102,1319:0,108,255:40,0 chr2 165586615 . T . PASS END=165586625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:93:37:0,93,1117:0,95,255:37,0 chr2 165600197 . C . PASS END=165600362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:81:36:0,81,1215:0,89,255:40,0 chr2 165600363 . G . PASS END=165600368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:72:32:0,72,1080:0,92,255:25,0 chr2 165600369 . T . PASS END=165600371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 165600372 . C . PASS END=165600380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:25,0 chr2 165600381 . T . PASS END=165600381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 165600382 . T . PASS END=165600382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,909:0,57,255:25,0 chr2 165600383 . C . PASS END=165600384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 165600385 . C . PASS END=165600385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr2 165630217 . A . PASS END=165630264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:60:0,120,1800:0,164,255:40,0 chr2 165636165 . C . PASS END=165636271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:31:0,81,1215:0,93,255:40,0 chr2 165657044 . C . PASS END=165657064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:95:0,120,1800:0,205,255:40,0 chr2 165693938 . T . PASS END=165693944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr2 165693945 . T . PASS END=165693945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1039:0,41,255:29,0 chr2 165693946 . A . PASS END=165693947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1084:0,63,255:29,0 chr2 165693948 . C . PASS END=165693949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1109:0,80,255:31,0 chr2 165693950 . C . PASS END=165693950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:31,0 chr2 165693951 . T . PASS END=165693951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 165693952 . C . PASS END=165693997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:83:36:0,83,1122:0,83,255:40,0 chr2 165693998 . A . PASS END=165693998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1158:0,61,255:31,0 chr2 165693999 . T . PASS END=165693999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 165697666 . C . PASS END=165697689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,105,1390:0,108,255:39,0 chr2 165697690 . G . PASS END=165697690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1363:0,62,255:35,0 chr2 165697691 . G . PASS END=165697756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1264:0,92,255:40,0 chr2 165698467 . C . PASS END=165698467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 165698468 . C . PASS END=165698468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 165698469 . T . PASS END=165698470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr2 165698471 . C . PASS END=165698471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 165698472 . C . PASS END=165698476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr2 165698477 . T . PASS END=165698479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:30:0,62,1013:0,62,255:30,0 chr2 165698480 . C . PASS END=165698482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 165698483 . G . PASS END=165698483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 165698484 . C . PASS END=165698496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1157:0,93,255:31,0 chr2 165698497 . A . PASS END=165698497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:29,0 chr2 165698498 . G . PASS END=165698513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 165698514 . G . PASS END=165698514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 165698515 . C . PASS END=165698515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 165698516 . A . PASS END=165698524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:29:0,66,990:0,71,255:26,0 chr2 165698525 . G . PASS END=165698525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,891:0,32,255:20,0 chr2 165698526 . C . PASS END=165698529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,990:0,67,255:22,0 chr2 165698530 . T . PASS END=165698530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,868:0,37,255:21,0 chr2 165698531 . A . PASS END=165698531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,848:0,47,255:20,0 chr2 165698532 . A . PASS END=165698536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 165698537 . G . PASS END=165698537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:19,0 chr2 165698538 . G . PASS END=165698540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 165698541 . C . PASS END=165698554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:19:0,46,714:0,46,255:19,0 chr2 165754947 . T . PASS END=165754971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:26,0 chr2 165754972 . G . PASS END=165755228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:28:0,81,1005:0,81,255:40,0 chr2 165755229 . A . PASS END=165755230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:39:0,72,1080:0,101,255:24,0 chr2 165755231 . A . PASS END=165755240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:42:27:0,42,630:0,81,255:18,0 chr2 165758833 . T . PASS END=165758871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:79:0,120,1800:0,202,255:40,0 chr2 165758872 . C . PASS END=165758886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,205,255:40,0 chr2 165760701 . T . PASS END=165760721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:59:0,120,1800:0,161,255:40,0 chr2 165764586 . C . PASS END=165764600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:107:0,120,1800:0,255,255:40,0 chr2 165765150 . A . PASS END=165765261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:83:34:0,83,1199:0,83,255:40,0 chr2 165765262 . A . PASS END=165765262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,5:59:58:59:0,58,1882:0,58,255:40,0 chr2 165765263 . A . PASS END=165765281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,138,255:40,0 chr2 165768146 . C . PASS END=165768258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,6:77:99:50:0,120,1800:0,131,255:40,0 chr2 165771544 . C . PASS END=165771775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:87:31:0,87,1305:0,90,255:40,0 chr2 165771776 . A . PASS END=165771776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 165771777 . A . PASS END=165771778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 165771779 . A . PASS END=165771779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 165771780 . A . PASS END=165771781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 165771782 . T . PASS END=165771782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:25,0 chr2 165771783 . G . PASS END=165771783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 165772413 . C . PASS END=165772483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,173,255:40,0 chr2 165793860 . A . PASS END=165793939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:55:0,120,1800:0,136,255:40,0 chr2 165795960 . C . PASS END=165796066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:67:0,120,1800:0,177,255:40,2 chr2 165801079 . C . PASS END=165801144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:80:0,120,1800:0,228,255:40,0 chr2 165802103 . C . PASS END=165802117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1243:0,111,255:39,0 chr2 165802118 . A . PASS END=165802118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1302:0,67,255:36,0 chr2 165802119 . A . PASS END=165802135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,117,1282:0,117,255:40,0 chr2 165802136 . G . PASS END=165802136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1651:0,72,255:40,0 chr2 165802137 . G . PASS END=165802221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:35:0,81,1116:0,81,255:40,0 chr2 165802222 . A . PASS END=165802222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:30,0 chr2 165802223 . A . PASS END=165802237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1142:0,88,255:32,0 chr2 165809217 . C . PASS END=165809291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:91:0,120,1800:0,255,255:40,0 chr2 165811141 . C . PASS END=165811255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:45:0,108,1620:0,135,255:40,0 chr2 165811719 . C . PASS END=165811757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:39:0,82,1305:0,82,255:40,0 chr2 165946660 . T . PASS END=165947855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:91:42:0,91,1535:0,91,255:40,0 chr2 165948764 . C . PASS END=165949034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:98:34:0,98,1351:0,98,255:40,0 chr2 165950884 . T . PASS END=165950988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:49:0,120,1800:0,140,255:40,0 chr2 165952021 . C . PASS END=165952158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,2:92:99:64:0,120,1800:0,176,255:40,0 chr2 165952168 . A . PASS END=165952168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 165952977 . A . PASS END=165953030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:78:0,120,1800:0,223,255:40,0 chr2 165953759 . T . PASS END=165953759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 165953762 . C . PASS END=165953765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:32:0,96,1217:0,96,255:39,0 chr2 165953766 . T . PASS END=165953766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:38,0 chr2 165953767 . G . PASS END=165954034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:90:39:0,90,1350:0,104,255:40,0 chr2 165956812 . C . PASS END=165956934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:38:0,84,1353:0,84,255:40,0 chr2 165956944 . G . PASS END=165956944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 165969395 . A . PASS END=165969568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:81:36:0,81,1215:0,108,255:40,0 chr2 165970326 . C . PASS END=165970480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,105,1483:0,112,255:40,1 chr2 165971965 . C . PASS END=165972085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:43:0,112,1378:0,112,255:40,0 chr2 165979404 . T . PASS END=165979409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,232,255:40,0 chr2 165984141 . C . PASS END=165984141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 165984142 . T . PASS END=165984142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 165984143 . C . PASS END=165984143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:22,0 chr2 165984144 . T . PASS END=165984144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 165984145 . T . PASS END=165984145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 165984146 . T . PASS END=165984165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,771:0,69,255:26,0 chr2 165984166 . T . PASS END=165984167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr2 165984168 . A . PASS END=165984168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:24,0 chr2 165984169 . C . PASS END=165984169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr2 165984170 . T . PASS END=165984170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 165984171 . G . PASS END=165984206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1064:0,80,255:31,0 chr2 165984207 . C . PASS END=165984208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,82,255:26,0 chr2 165984209 . C . PASS END=165984220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1305:0,95,255:31,0 chr2 165984221 . T . PASS END=165984221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr2 165984222 . T . PASS END=165984223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1178:0,93,255:31,0 chr2 165984224 . G . PASS END=165984224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr2 165984225 . C . PASS END=165984225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 165984226 . A . PASS END=165984226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 165984227 . C . PASS END=165984227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 165984228 . T . PASS END=165984231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,99,255:26,0 chr2 165984232 . A . PASS END=165984236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr2 165984237 . G . PASS END=165984239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 165984240 . G . PASS END=165984240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 165984241 . C . PASS END=165984241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1062:0,63,255:26,0 chr2 165984242 . T . PASS END=165984244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 165984245 . G . PASS END=165984245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:26,0 chr2 165984246 . G . PASS END=165984246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 165984247 . T . PASS END=165984248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:74:30:0,74,1078:0,74,255:26,0 chr2 165984249 . G . PASS END=165984249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 165984250 . T . PASS END=165984250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1017:0,76,255:27,0 chr2 165984251 . T . PASS END=165984251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 165984252 . T . PASS END=165984252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr2 165984253 . A . PASS END=165984258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 165984259 . G . PASS END=165984259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 165984260 . A . PASS END=165984271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1194:0,86,255:34,0 chr2 165984272 . T . PASS END=165984272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:32,0 chr2 165984273 . T . PASS END=165984299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:36,0 chr2 165984300 . G . PASS END=165984300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr2 165984301 . C . PASS END=165984566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:93:36:0,93,1395:0,104,255:40,0 chr2 165984567 . T . PASS END=165984588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1197:0,83,255:35,0 chr2 165984589 . A . PASS END=165984589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1091:0,66,255:27,0 chr2 165984590 . A . PASS END=165984598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 165984599 . A . PASS END=165984601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 165984602 . G . PASS END=165984602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,825:0,37,255:21,0 chr2 165984603 . G . LowGQ END=165984603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,646:33,0,255:20,0 chr2 165984604 . T . PASS END=165984605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:34:28:0,34,770:0,34,255:21,0 chr2 165984606 . C . PASS END=165984607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,864:0,64,255:24,0 chr2 165984608 . G . PASS END=165984608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,664:0,31,255:21,0 chr2 165984609 . A . PASS END=165984611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,931:0,64,255:25,0 chr2 165986450 . C . PASS END=165986462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1280:0,92,255:35,0 chr2 165986463 . A . PASS END=165986463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1264:0,69,255:34,0 chr2 165986464 . T . PASS END=165986465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:35,0 chr2 165986466 . A . PASS END=165986466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr2 165986467 . C . PASS END=165986803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:34:0,85,1164:0,85,255:40,0 chr2 165986804 . A . PASS END=165986806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,85,255:26,0 chr2 165987754 . C . PASS END=165987771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1280:0,92,255:40,0 chr2 165987772 . T G, 170.40 PASS DP=41;MQ=248.96;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,14,0:0,27,0:120:208,123,0,1589,123,1589:255,123,0:0,0:1.7040e+02,1.2040e+02,0.0000e+00,4.5000e+02,1.5517e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,14:0,0,18,23 chr2 165987773 . A . PASS END=165987809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,102,1535:0,102,255:40,0 chr2 165987810 . T . PASS END=165987927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:44:0,114,1710:0,132,255:40,0 chr2 165994386 . T . PASS END=165994386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 165994389 . C . PASS END=165994400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:18,0 chr2 165994401 . A . PASS END=165994402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr2 165994403 . T . PASS END=165994403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 165994404 . C . PASS END=165994410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,769:0,66,255:24,0 chr2 165994411 . C . PASS END=165994429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:38,0 chr2 165994430 . T . PASS END=165994430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:37,0 chr2 165994431 . G . PASS END=165994627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:38:0,114,1443:0,114,255:40,0 chr2 165995986 . C . PASS END=165996069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:35:0,102,1438:0,105,255:40,0 chr2 165996070 . G . PASS END=165996106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,113,1419:0,113,255:40,0 chr2 165996107 . T A, 173.41 PASS DP=42;MQ=249.18;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,20,0:0,22,0:123:211,126,0,1628,126,1628:255,129,0:0,0:1.7341e+02,1.2341e+02,0.0000e+00,4.5000e+02,1.5818e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,31:0,0,21,21 chr2 165996108 . G . PASS END=165996118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:41:0,90,1491:0,90,255:38,0 chr2 165997155 . T . PASS END=165997155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 165997161 . C . PASS END=165997169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,869:0,69,255:26,0 chr2 165997170 . A . PASS END=165997175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:29,0 chr2 165997176 . T . PASS END=165997176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 165997177 . C . PASS END=165997508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:29:0,84,1078:0,87,255:40,0 chr2 166003249 . C . PASS END=166003441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:41:0,107,1554:0,107,255:40,0 chr2 166003442 . G . PASS END=166003478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,152,255:40,0 chr2 166003479 . G A, 209.07 PASS DP=55;MQ=250.00;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,25,0:0,29,0:159:247,162,0,2056,162,2056:255,165,0:0,0:2.0907e+02,1.5907e+02,0.0000e+00,4.5000e+02,1.9384e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,37:0,0,32,22 chr2 166003480 . C . PASS END=166003516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:43:0,93,1395:0,99,255:40,0 chr2 166003517 . G . PASS END=166003521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,114,255:30,0 chr2 166003522 . T . PASS END=166003535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:68:28:0,68,1030:0,68,255:26,0 chr2 166003536 . C . PASS END=166003539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,992:0,65,255:26,0 chr2 166003543 . T . PASS END=166003543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 166010956 . C . PASS END=166010956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 166010962 . C . PASS END=166010969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,592:0,51,255:19,0 chr2 166010970 . C . PASS END=166010986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr2 166010987 . A . PASS END=166010987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 166010988 . G . PASS END=166011010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,837:0,66,255:23,0 chr2 166011011 . T . PASS END=166011011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 166011012 . C . PASS END=166011024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,908:0,72,255:26,0 chr2 166011025 . T . PASS END=166011025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 166011026 . T . PASS END=166011033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr2 166011034 . T . PASS END=166011034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 166011035 . T . PASS END=166011035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 166011036 . C . PASS END=166011039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 166011040 . G . PASS END=166011040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 166011041 . G . PASS END=166011041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 166011042 . T . PASS END=166011042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr2 166011043 . G . PASS END=166011157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1305:0,90,255:40,0 chr2 166011158 . G . PASS END=166011164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:33:0,60,900:0,99,255:25,0 chr2 166011165 . A . PASS END=166011168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:42:29:0,42,630:0,87,255:14,0 chr2 166012272 . C . PASS END=166012284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1173:0,86,255:37,0 chr2 166012285 . T . PASS END=166012285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:36,0 chr2 166012286 . T . PASS END=166012388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1328:0,81,255:40,0 chr2 166012389 . A . PASS END=166012397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:69:32:0,69,1035:0,96,255:25,0 chr2 166012398 . T . PASS END=166012409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:19:0,42,630:0,57,255:16,0 chr2 166012410 . C . PASS END=166012410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:11,0 chr2 166012411 . T . PASS END=166012413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 166012420 . G . PASS END=166012420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 166018818 . C . PASS END=166018881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:82:0,120,1800:0,210,255:40,0 chr2 166018885 . T . PASS END=166018885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,246,255:40,0 chr2 166018891 . C . PASS END=166018891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,3:82:99:82:0,120,1800:0,152,255:40,3 chr2 166019066 . T . PASS END=166019182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:40:0,116,1612:0,116,255:40,0 chr2 166019183 . C . PASS END=166019219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,136,255:40,1 chr2 166019220 . G T, 50.00 PASS DP=58;MQ=247.25;MQRankSum=6.108;ReadPosRankSum=2.920;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,33,0:0.569,0.000:58:16,18,0:9,15,0:48:85,0,48,1164,886,2050:255,0,255:22,0:5.0000e+01,7.4811e-05,5.1426e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,17,11,22:13,12,10,23 chr2 166019221 . C . PASS END=166019257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,120,1800:0,132,255:40,0 chr2 166019258 . T . PASS END=166019296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:30:0,84,1260:0,90,255:40,0 chr2 166019297 . T . PASS END=166019318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,74,255:26,0 chr2 166019319 . C . PASS END=166019338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,50,255:18,0 chr2 166020128 . C . PASS END=166020220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,172,255:40,0 chr2 166020312 . C . PASS END=166020403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:35:0,91,1227:0,91,255:40,0 chr2 166020902 . G . PASS END=166021030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:90:51:0,90,1350:0,140,255:40,0 chr2 166021034 . G . PASS END=166021034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr2 166025246 . T . PASS END=166025251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr2 166025252 . T . PASS END=166025335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,117,1755:0,129,255:40,0 chr2 166026940 . G . PASS END=166027058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:53:0,120,1800:0,126,255:40,0 chr2 166032641 . T . PASS END=166032643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr2 166032644 . C . PASS END=166032646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 166032647 . A . PASS END=166032647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 166032648 . T . PASS END=166032880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:28:0,80,1169:0,80,255:40,0 chr2 166032881 . G . PASS END=166032882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr2 166032883 . G . PASS END=166032883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 166032884 . T . PASS END=166032894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,68,255:26,0 chr2 166032895 . C . PASS END=166032903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,50,255:18,0 chr2 166032904 . T . PASS END=166032904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:39:22:0,39,585:0,49,255:12,0 chr2 166150358 . G . PASS END=166150358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 166150369 . C . PASS END=166150369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 166150520 . TA T, 6.87 DRAGENIndelHardQUAL DP=31;MQ=245.73;MQRankSum=2.522;ReadPosRankSum=1.776;FractionInformativeReads=0.935;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,13,0:0.448,0.000:29:7,8,0:9,5,0:7:8,0,19,33,40,73:255,0,255:11,16:6.8736e+00,1.0244e+00,2.3268e+01,6.6623e+01,7.5545e+01,1.0938e+02:0.00,2.00,5.00,34.77,36.77,37.77:8,8,9,4:11,5,8,5 chr2 166150521 . A . LowGQ END=166150521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,18:44:0:44:0,0,298:255,0,255:17,14 chr2 166150525 . A . PASS END=166150525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:87:41:0,87,1305:0,107,255:28,0 chr2 166150546 . A . PASS END=166150546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1305:0,91,255:29,2 chr2 166150547 . A . PASS END=166150548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:42:43:0,42,1046:0,42,255:29,2 chr2 166150549 . G . LowGQ END=166150550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,7:43:0:42:0,0,362:25,0,255:26,10 chr2 166150554 . T . PASS END=166150554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1449:0,104,255:34,0 chr2 166150631 . A . PASS END=166150631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr2 166152292 . A . PASS END=166152292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 166152334 . A . PASS END=166152568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:36:0,84,1260:0,99,255:40,0 chr2 166152569 . A . PASS END=166152573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr2 166152574 . C . PASS END=166152574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 166152575 . T . PASS END=166152612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,763:0,66,255:26,0 chr2 166153527 . A . PASS END=166153645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:60:0,120,1800:0,151,255:40,0 chr2 166153647 . T . PASS END=166153647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 166164356 . A . PASS END=166164356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 166164358 . T . PASS END=166164447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,168,255:40,0 chr2 166165176 . G . PASS END=166165305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,198,255:40,0 chr2 166165311 . A . PASS END=166165311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 166165675 . G . PASS END=166165766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,169,255:40,0 chr2 166165862 . A . PASS END=166165953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:83:0,120,1800:0,205,255:40,0 chr2 166165956 . G . PASS END=166165956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 166166833 . G . PASS END=166166833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 166166834 . C . PASS END=166166834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 166166835 . C . PASS END=166166841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:17,0 chr2 166166842 . C . PASS END=166166842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 166166843 . C . PASS END=166166843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr2 166166844 . A . PASS END=166166845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 166166846 . T . PASS END=166166846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 166166847 . G . PASS END=166166847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 166166848 . T . PASS END=166166850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 166166851 . G . PASS END=166166851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 166166852 . G . PASS END=166166852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 166166853 . G . PASS END=166166855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 166166856 . C . PASS END=166166856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 166166857 . T . PASS END=166166857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 166166858 . G . PASS END=166167084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:80:29:0,80,1041:0,80,255:40,0 chr2 166167085 . A . PASS END=166167089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,95,255:26,0 chr2 166167090 . T . PASS END=166167100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr2 166167101 . T . PASS END=166167107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1023:0,71,255:26,0 chr2 166167108 . A . PASS END=166167110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:28:0,54,810:0,84,255:19,0 chr2 166167111 . A . PASS END=166167114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,67,255:20,0 chr2 166167115 . A . PASS END=166167120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:47:21:0,47,737:0,47,255:19,0 chr2 166168503 . A . PASS END=166168503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr2 166168535 . G . PASS END=166168598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:86:0,120,1800:0,246,255:40,0 chr2 166170115 . C . PASS END=166170115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 166170130 . C . PASS END=166170138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1156:0,93,255:35,0 chr2 166170139 . T . PASS END=166170139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:32,0 chr2 166170140 . G . PASS END=166170265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,82,255:40,0 chr2 166170266 . C . PASS END=166170271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:23,0 chr2 166170412 . A . PASS END=166170412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 166170413 . C . PASS END=166170413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 166170414 . A . PASS END=166170414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 166170415 . C . PASS END=166170618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1181:0,87,255:40,0 chr2 166171979 . A . PASS END=166171979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 166171981 . G . PASS END=166171996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:25,0 chr2 166171997 . C . PASS END=166171998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 166171999 . T . PASS END=166171999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 166172000 . C . PASS END=166172000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 166172001 . T . PASS END=166172001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 166172002 . G . PASS END=166172004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 166172005 . G . PASS END=166172005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 166172006 . A . PASS END=166172252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:80:30:0,80,1119:0,80,255:40,0 chr2 166172253 . T . PASS END=166172253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1329:0,73,255:33,0 chr2 166172254 . T . PASS END=166172268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1260:0,99,255:33,0 chr2 166176750 . G . PASS END=166176752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 166176753 . A . PASS END=166176753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 166176754 . C . PASS END=166176778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 166176779 . T . PASS END=166176779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 166176780 . G . PASS END=166176785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 166176786 . C . PASS END=166176791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:9,0 chr2 166176792 . C . PASS END=166176804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 166176805 . A . PASS END=166176811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 166176812 . A . PASS END=166176812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 166176813 . G . PASS END=166176815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 166176816 . T . PASS END=166176828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:10,0 chr2 166176829 . C . PASS END=166176829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 166176830 . T . PASS END=166176832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 166176833 . C . PASS END=166176874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,241:0,21,241:9,0 chr2 166179663 . T . PASS END=166179663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:18,0 chr2 166179666 . T . PASS END=166179671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 166179672 . C . PASS END=166179679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 166179680 . C . PASS END=166179682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 166179683 . T . PASS END=166179683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 166179684 . G . PASS END=166179695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 166179696 . T . PASS END=166179696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,666:0,46,255:20,0 chr2 166179697 . C . PASS END=166179707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,834:0,72,255:25,0 chr2 166179708 . A . PASS END=166179708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 166179709 . A . PASS END=166179709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 166179710 . C . PASS END=166179710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 166179711 . A . PASS END=166179790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1080:0,80,255:33,0 chr2 166179791 . C . PASS END=166179792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 166179793 . C . PASS END=166179809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1087:0,82,255:29,0 chr2 166179810 . A . PASS END=166179810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 166179811 . G . PASS END=166179817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 166179818 . A . PASS END=166179819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 166179820 . A . PASS END=166179833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 166179834 . C . PASS END=166179834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 166179835 . C . PASS END=166179835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 166179836 . G . PASS END=166179836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:25,0 chr2 166179837 . C . PASS END=166179874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,915:0,64,255:26,0 chr2 166179875 . G . PASS END=166179877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 166179878 . C . PASS END=166179878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 166179879 . A . PASS END=166179884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr2 166179885 . G . PASS END=166179893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,955:0,67,255:26,0 chr2 166179894 . G . PASS END=166179895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 166179896 . G . PASS END=166179896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:24,0 chr2 166179897 . C . PASS END=166179928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:30,0 chr2 166179929 . T . PASS END=166179929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 166179930 . A . PASS END=166179954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1186:0,90,255:31,0 chr2 166179955 . T . PASS END=166179955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,988:0,79,255:30,0 chr2 166179956 . C . PASS END=166179969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 166179970 . G . PASS END=166179984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1031:0,71,255:25,0 chr2 166179985 . C . PASS END=166179985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:23,0 chr2 166179986 . A . PASS END=166179992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 166179993 . G . PASS END=166179993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 166179994 . G . PASS END=166179996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 166179997 . A . PASS END=166179998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:19,0 chr2 166179999 . C . PASS END=166180000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 166180001 . C . PASS END=166180010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,53,255:18,0 chr2 166180013 . G . PASS END=166180013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 166180015 . G . PASS END=166180015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 166180020 . A . PASS END=166180020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 166183362 . G . PASS END=166183494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,107,1800:0,107,255:40,0 chr2 166183497 . A . PASS END=166183497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 166183499 . G . PASS END=166183499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 166183665 . A . LowGQ END=166183667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,11:74:0:73:0,0,1167:200,0,255:40,27 chr2 166183668 . T . PASS END=166183711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:74:0,120,1800:0,167,255:40,1 chr2 166184914 . G . PASS END=166184936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 166184937 . G . PASS END=166184938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 166184939 . C . PASS END=166184940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 166184941 . T . PASS END=166184951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr2 166184952 . C . PASS END=166184955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 166184956 . A . PASS END=166184957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 166187840 . A . PASS END=166188051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:35:0,81,1130:0,88,255:40,0 chr2 166188052 . A . PASS END=166188063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:30:0,60,900:0,90,255:26,0 chr2 166188064 . T . PASS END=166188073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:19,0 chr2 166188074 . A . PASS END=166188078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,57,255:13,0 chr2 166188087 . C . PASS END=166188087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 166198806 . G . PASS END=166198981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,120,1800:0,132,255:40,0 chr2 166201061 . C . PASS END=166201061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:28,0 chr2 166201065 . C . PASS END=166201070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 166201071 . G . PASS END=166201071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 166201072 . T . PASS END=166201072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 166201073 . T . PASS END=166201073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 166201074 . T . PASS END=166201421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:31:0,80,1065:0,80,255:40,0 chr2 166201425 . T . PASS END=166201425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 166206411 . G . PASS END=166206446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,170,255:40,0 chr2 166206592 . T . PASS END=166206657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:97:43:0,97,1651:0,97,255:40,0 chr2 166210702 . G . PASS END=166211181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,117,1755:0,119,255:40,0 chr2 166214284 . G . PASS END=166214289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,186,255:40,0 chr2 166221652 . G . PASS END=166221671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,757:0,63,255:24,0 chr2 166221672 . C . PASS END=166221673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 166221674 . T . PASS END=166221674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,987:0,59,255:29,0 chr2 166221675 . C . PASS END=166221676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 166221677 . G . PASS END=166221677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 166221678 . A . PASS END=166221729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:30:0,82,1042:0,82,255:35,0 chr2 166221730 . T . PASS END=166221730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:30,0 chr2 166221731 . G . PASS END=166221753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:32,0 chr2 166221754 . T . PASS END=166221754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 166221755 . G . PASS END=166221758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 166221759 . C . PASS END=166221760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1062:0,74,255:26,0 chr2 166221761 . T . PASS END=166221761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:25,0 chr2 166221762 . G . PASS END=166221763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:25,0 chr2 166221764 . T . PASS END=166221764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,952:0,53,255:24,0 chr2 166221765 . T . PASS END=166221771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,902:0,64,255:25,0 chr2 166221772 . A . PASS END=166221772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr2 166221773 . G . PASS END=166221773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 166223712 . T . PASS END=166223712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 166223727 . A . PASS END=166223728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 166223729 . T . PASS END=166223729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 166223730 . G . PASS END=166223881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,99,1485:0,137,255:40,0 chr2 166226636 . G . PASS END=166226638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,886:0,61,255:26,0 chr2 166226639 . T . PASS END=166226639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,815:0,45,255:24,0 chr2 166226640 . T . PASS END=166226641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 166226642 . G . PASS END=166226642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:25,0 chr2 166226643 . A . PASS END=166226643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 166226644 . A . PASS END=166226644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 166226645 . G . PASS END=166226646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1100:0,63,255:30,0 chr2 166226647 . T . PASS END=166226648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:41:0,107,1474:0,107,255:40,0 chr2 166226649 . T . PASS END=166226649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:40,0 chr2 166226650 . A . PASS END=166226809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:80:41:0,80,1474:0,80,255:40,0 chr2 166229732 . T . PASS END=166229733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1166:0,96,255:32,0 chr2 166229735 . G . PASS END=166229857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:35:0,88,1136:0,88,255:40,0 chr2 166231193 . A . PASS END=166231193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 166231195 . G . PASS END=166231476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:31:0,84,1177:0,92,255:40,0 chr2 166231481 . G . PASS END=166231481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 166234101 . T . PASS END=166234101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 166234104 . C . PASS END=166234104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1452:0,112,255:40,0 chr2 166234107 . G . PASS END=166234161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,139,255:40,0 chr2 166237102 . G . PASS END=166237239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:66:0,120,1800:0,186,255:40,0 chr2 166237248 . A . PASS END=166237248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 166237593 . A . PASS END=166237593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1590:0,113,255:40,0 chr2 166237603 . T . PASS END=166237707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,106,1761:0,106,255:40,0 chr2 166237715 . T . PASS END=166237715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1511:0,74,255:36,0 chr2 166243247 . T . PASS END=166243247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 166243256 . A . PASS END=166243267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1155:0,80,255:36,0 chr2 166243268 . G . PASS END=166243268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1213:0,64,255:34,0 chr2 166243269 . G . PASS END=166243280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:37:0,97,1321:0,97,255:40,0 chr2 166243281 . A . PASS END=166243281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1410:0,65,255:34,0 chr2 166243282 . T . PASS END=166243526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:84:39:0,84,1332:0,84,255:40,0 chr2 166245139 . G . PASS END=166245147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr2 166245148 . T . PASS END=166245148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:23,0 chr2 166245149 . G . PASS END=166245150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 166245151 . C . PASS END=166245151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 166245152 . T . PASS END=166245153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr2 166245154 . A . PASS END=166245167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr2 166245168 . T . PASS END=166245169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1047:0,74,255:28,0 chr2 166245170 . T . PASS END=166245192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:40,0 chr2 166245193 . G . PASS END=166245229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,125,255:40,0 chr2 166245230 . T A, 227.12 PASS DP=60;MQ=144.36;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,31,0:0,29,0:177:265,180,0,2287,180,2287:255,180,0:0,0:2.2712e+02,1.7712e+02,0.0000e+00,4.5000e+02,2.1189e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,25:0,0,26,34 chr2 166245231 . C . PASS END=166245267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,152,255:40,0 chr2 166245268 . T . PASS END=166245974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:37:0,105,1404:0,108,255:40,0 chr2 166245975 . A . PASS END=166245975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr2 166245976 . A . PASS END=166246334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:91:34:0,91,1144:0,91,255:40,0 chr2 166246381 . G . PASS END=166246381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,229,255:40,0 chr2 166246422 . G . PASS END=166246422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 166246598 . C . PASS END=166246598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 166246625 . G . PASS END=166246625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 166246771 . G . PASS END=166246771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 166246869 . A . PASS END=166246869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 166247024 . G . PASS END=166247024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr2 166247321 . A . PASS END=166247321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 166247334 . G . PASS END=166247334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 166247337 . G . PASS END=166247337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,188,255:40,0 chr2 166247543 . C . PASS END=166247543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 166247598 . A . PASS END=166247598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 166247693 . G . PASS END=166247693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 166247767 . A . PASS END=166247767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 166247926 . G . PASS END=166247926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr2 166247956 . T . PASS END=166247956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 166248112 . A . PASS END=166248112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,220,255:40,0 chr2 166248159 . A . PASS END=166248159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:71:0,120,1800:0,158,255:40,0 chr2 166248373 . A . PASS END=166248373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 166248692 . A . PASS END=166248692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:61:0,120,1800:0,150,255:40,0 chr2 166248708 . T . PASS END=166248708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 166248788 . C . PASS END=166248788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 166407511 . A . PASS END=166407511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 166430869 . A . PASS END=166430941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:59:0,120,1800:0,147,255:40,0 chr2 166433114 . A . PASS END=166433226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:51:0,93,1395:0,120,255:40,0 chr2 166433227 . A . PASS END=166433231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:69:41:0,69,1035:0,123,255:25,0 chr2 166451553 . G . PASS END=166451687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,102,1530:0,124,255:40,0 chr2 166451688 . A . PASS END=166451709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:61:26:0,61,832:0,61,255:26,0 chr2 166451710 . T . PASS END=166451710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 166451711 . A . PASS END=166451713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 166451714 . C . PASS END=166451723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,63,255:16,0 chr2 166514271 . C . PASS END=166514301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:26,0 chr2 166514302 . G . PASS END=166514308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:30,0 chr2 166514309 . A . PASS END=166514309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 166514310 . A . PASS END=166514424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1061:0,93,255:40,0 chr2 166514425 . G . PASS END=166514458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,758:0,61,255:26,0 chr2 166514459 . C . PASS END=166514461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 166514462 . G . PASS END=166514462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 166514463 . A . PASS END=166514469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 166514470 . C . PASS END=166514470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 166514471 . C . PASS END=166514490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:19,0 chr2 166514491 . A . PASS END=166514530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,413:0,33,255:13,0 chr2 166532822 . A . PASS END=166532949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:33:0,90,1222:0,90,255:40,1 chr2 166532950 . A . PASS END=166532950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1429:0,74,255:40,0 chr2 166532951 . A . PASS END=166533012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:40:0,84,1369:0,84,255:40,1 chr2 166533013 . C . PASS END=166533013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr2 166533014 . G . PASS END=166533082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1202:0,83,255:38,0 chr2 166533083 . A . PASS END=166533106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 166533107 . A . PASS END=166533107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:19,0 chr2 166533108 . T . PASS END=166533115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 166533116 . C . PASS END=166533118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 166535211 . G . PASS END=166535557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:34:0,84,1260:0,88,255:40,2 chr2 166535558 . C . PASS END=166535558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:40,0 chr2 166535559 . T . PASS END=166535631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:43:0,91,1452:0,91,255:40,0 chr2 166535632 . A . PASS END=166535632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1438:0,79,255:36,0 chr2 166535633 . A . PASS END=166535656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:85:42:0,85,1328:0,85,255:40,0 chr2 166535657 . T . PASS END=166535657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:65:46:0,65,1310:0,65,255:38,0 chr2 166535658 . G . PASS END=166535681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:83:42:0,83,1485:0,83,255:40,0 chr2 166535682 . T . PASS END=166535682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1362:0,63,255:40,0 chr2 166535683 . T . PASS END=166535997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:37:0,93,1394:0,93,255:40,0 chr2 166535998 . C . PASS END=166535998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1526:0,74,255:37,0 chr2 166535999 . C . PASS END=166536252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1178:0,86,255:40,0 chr2 166536253 . T . PASS END=166536260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,74,255:26,0 chr2 166536261 . T . PASS END=166536263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 166604354 . G . PASS END=166604354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 166604356 . T . PASS END=166604356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:69:0,120,1800:0,174,255:40,0 chr2 166604394 . A . PASS END=166604394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,238,255:40,0 chr2 166604421 . T . PASS END=166604421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:77:0,120,1800:0,215,255:40,0 chr2 166604485 . C . PASS END=166604485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 166604971 . C . PASS END=166604973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:38,0 chr2 166605148 . C . PASS END=166605148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 166605291 . T . PASS END=166605413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:33:0,82,1117:0,82,255:40,0 chr2 166606252 . C . PASS END=166606400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:34:0,85,1135:0,85,255:40,0 chr2 166606401 . A . PASS END=166606401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1080:0,58,255:28,0 chr2 166606402 . G . PASS END=166606404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:29,0 chr2 166611131 . G . PASS END=166611131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 166611136 . C . PASS END=166611238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:83:35:0,83,1260:0,83,255:40,0 chr2 166611437 . C . PASS END=166611437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 166611439 . C . PASS END=166611439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 166611441 . C . PASS END=166611573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:84:37:0,84,1301:0,84,255:40,0 chr2 166613550 . A . PASS END=166613550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 166613557 . T . PASS END=166613745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:33:0,81,1205:0,83,255:40,0 chr2 166613746 . A . PASS END=166613746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1196:0,75,255:28,0 chr2 166613747 . C . PASS END=166613747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 166613748 . A . PASS END=166613757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,990:0,83,255:23,0 chr2 166615257 . T . PASS END=166615374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:56:0,120,1800:0,164,255:40,0 chr2 166615846 . T . PASS END=166616075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:83:31:0,83,1111:0,83,255:40,2 chr2 166616076 . C . PASS END=166616077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 166616078 . C . PASS END=166616080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:54:31:0,54,810:0,93,255:19,0 chr2 166618263 . C . PASS END=166618302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,157,255:40,0 chr2 166618353 . C . PASS END=166618404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,155,255:40,0 chr2 166618415 . A . PASS END=166618563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:90:42:0,90,1350:0,124,255:40,0 chr2 166618564 . T . PASS END=166618564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:31,0 chr2 166621394 . C . PASS END=166621539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:30:0,87,1305:0,90,255:40,0 chr2 166621540 . C . PASS END=166621540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:44:50:0,44,1375:0,44,255:35,0 chr2 166621541 . A . PASS END=166621566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:95:41:0,95,1387:0,95,255:40,0 chr2 166621568 . T . PASS END=166621568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1551:0,110,255:36,0 chr2 166626696 . T . PASS END=166626710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1020:0,83,255:34,0 chr2 166626711 . T . PASS END=166626711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr2 166626712 . C . PASS END=166627210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:81:34:0,81,1140:0,81,255:40,0 chr2 166627283 . G . PASS END=166627283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 166650554 . A . PASS END=166650554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 166650607 . G . PASS END=166650607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 166650643 . G . PASS END=166650643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 166650654 . G . PASS END=166650654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 166650662 . T . PASS END=166650662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr2 166650668 . G . PASS END=166650668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 166650725 . C . PASS END=166650725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,116:0,9,116:3,0 chr2 166650762 . C . LowDepth;LowGQ END=166650762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:1:0,0,0:0,3,39:0,0 chr2 166650774 . G . LowDepth;LowGQ END=166650774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 166650778 . G . LowDepth;LowGQ END=166650778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 166727511 . T . PASS END=166727526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,162,255:40,0 chr2 166727527 . A . PASS END=166727530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 166730141 . T . PASS END=166730141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 166730148 . T . PASS END=166730148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 166730158 . T . PASS END=166730158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 166730161 . C . PASS END=166730161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1188:0,96,255:32,0 chr2 166730339 . G . PASS END=166730339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr2 166730355 . G . PASS END=166730355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 166731019 . C . PASS END=166731019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 166731265 . T . PASS END=166731342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:46:0,120,1800:0,135,255:40,0 chr2 166731356 . A . PASS END=166731356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 166732665 . A . PASS END=166732665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,197,255:40,0 chr2 166732675 . C . PASS END=166732742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:85:0,120,1800:0,248,255:40,0 chr2 166736338 . T . PASS END=166736459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,113,1523:0,113,255:40,0 chr2 166736460 . A . PASS END=166736460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1444:0,77,255:39,0 chr2 166736461 . A . PASS END=166736477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1350:0,110,255:38,0 chr2 166737176 . T . PASS END=166737176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr2 166737189 . C . PASS END=166737299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:31:0,87,1305:0,93,255:40,0 chr2 166737300 . T . PASS END=166737300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr2 166737301 . G . PASS END=166737304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 166737305 . C . PASS END=166737305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 166737306 . A . PASS END=166737306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:25,0 chr2 166737307 . A . PASS END=166737309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 166740304 . T . PASS END=166740522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:31:0,81,1178:0,88,255:40,0 chr2 166740523 . C . PASS END=166740528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1008:0,71,255:26,0 chr2 166744789 . C . PASS END=166744802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:93:39:0,93,1413:0,93,255:40,0 chr2 166744803 . T . PASS END=166744803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1473:0,79,255:39,0 chr2 166744804 . T . PASS END=166744984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:41:0,110,1551:0,110,255:40,1 chr2 166744987 . G . PASS END=166744987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,99,1485:0,162,255:33,0 chr2 166746988 . C . PASS END=166747151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:89:40:0,89,1402:0,89,255:40,0 chr2 166747339 . T . PASS END=166747339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1235:0,99,255:33,0 chr2 166747348 . C . PASS END=166747498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:36:0,90,1350:0,108,255:40,0 chr2 166751200 . G . PASS END=166751334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:35:0,98,1301:0,98,255:40,0 chr2 166755196 . C . PASS END=166755277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:65:0,120,1800:0,165,255:40,0 chr2 166755279 . T . PASS END=166755279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,150,255:40,0 chr2 166756279 . C . PASS END=166756421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:33:0,99,1212:0,99,255:40,0 chr2 166758232 . C . PASS END=166758402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:39:0,84,1260:0,104,255:40,0 chr2 166758403 . A . PASS END=166758420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:30:0,69,1035:0,85,255:26,0 chr2 166764188 . C . PASS END=166764292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:81:38:0,81,1215:0,114,255:40,0 chr2 166764293 . T . PASS END=166764294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:37:0,75,1125:0,111,255:25,0 chr2 166767837 . C . PASS END=166767975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:55:0,120,1800:0,149,255:40,0 chr2 166769024 . C . PASS END=166769134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:42:0,102,1530:0,113,255:40,1 chr2 166770084 . C . PASS END=166770156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:49:0,120,1800:0,131,255:40,0 chr2 166771711 . C . PASS END=166771914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:30:0,83,1203:0,83,255:40,0 chr2 166771915 . T . PASS END=166771916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:28,0 chr2 166771917 . G . PASS END=166771937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr2 166771938 . G . PASS END=166771947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:26,0 chr2 166771948 . T . PASS END=166771949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 166773767 . C . PASS END=166773775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,907:0,69,255:26,0 chr2 166773776 . A . PASS END=166773903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,950:0,81,255:40,0 chr2 166773904 . T . PASS END=166773940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,109,1754:0,109,255:40,0 chr2 166773941 . T C, 43.00 PASS DP=47;MQ=250.00;MQRankSum=5.635;ReadPosRankSum=4.306;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,17,0:0.362,0.000:47:17,7,0:13,10,0:43:78,0,50,571,1073,1644:255,0,255:26,0:4.2997e+01,2.3945e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,17,8,9:12,18,8,9 chr2 166773942 . T . PASS END=166773968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:40:0,93,1518:0,93,255:40,0 chr2 166773969 . T . PASS END=166773976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:60:39:0,60,900:0,82,255:25,0 chr2 166773977 . A . PASS END=166773978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:57:39:0,57,855:0,117,255:19,0 chr2 166773979 . G . PASS END=166773991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:21:0,47,729:0,47,255:19,0 chr2 166775785 . C . PASS END=166775943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:84:35:0,84,1296:0,84,255:40,0 chr2 166781059 . C . PASS END=166781059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 166781060 . T . PASS END=166781060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 166781061 . G . PASS END=166781081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1087:0,83,255:33,0 chr2 166781082 . A . PASS END=166781082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:33,0 chr2 166781083 . T . PASS END=166781091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1264:0,102,255:35,0 chr2 166781092 . C . PASS END=166781092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr2 166781093 . T . PASS END=166781186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1124:0,82,255:40,0 chr2 166781187 . G . PASS END=166781188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1047:0,71,255:25,0 chr2 166785645 . C . PASS END=166785845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:43:0,117,1755:0,127,255:40,0 chr2 166786158 . A . PASS END=166786158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 166786160 . C . PASS END=166786258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,120,1800:0,140,255:40,0 chr2 166786260 . A . PASS END=166786260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 166786682 . C . PASS END=166786683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:34:0,102,1264:0,102,255:39,0 chr2 166786684 . A . PASS END=166786684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1091:0,67,255:36,0 chr2 166786685 . C . PASS END=166786865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:39:0,99,1445:0,117,255:40,0 chr2 166786866 . A . PASS END=166786872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:69:44:0,69,1035:0,132,255:26,0 chr2 166786873 . C . PASS END=166786874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:42:0,90,1350:0,126,255:30,0 chr2 166788268 . A . PASS END=166788298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,190,255:40,0 chr2 166788299 . A . PASS END=166788335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,191,255:40,0 chr2 166788336 . T C, 244.26 PASS DP=66;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,38,0:0,28,0:194:282,197,0,2451,197,2451:255,198,0:0,0:2.4426e+02,1.9426e+02,0.0000e+00,4.5000e+02,2.2903e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,35:0,0,29,37 chr2 166788337 . A . PASS END=166788366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:54:0,120,1800:0,146,255:40,0 chr2 166788369 . A . PASS END=166788369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 166789480 . T . PASS END=166789480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 166789483 . C . PASS END=166789567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:41:0,120,1800:0,123,255:40,0 chr2 166789877 . C . PASS END=166789932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:101:0,120,1800:0,255,255:40,0 chr2 166797537 . C . PASS END=166797608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:35:0,88,1074:0,88,255:40,0 chr2 166797609 . G . PASS END=166797645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,179,255:40,0 chr2 166797646 . C T, 233.12 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,30,0:0,32,0:183:271,186,0,371,371,371:255,186,0:0,0:2.3312e+02,1.8312e+02,0.0000e+00,3.6789e+02,4.0266e+02,3.7090e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,28,34:0,0,30,32 chr2 166797647 . A . PASS END=166797681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:38:0,81,1215:0,114,255:40,0 chr2 166797682 . C . PASS END=166797683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 166797684 . A . PASS END=166797688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:69:28:0,69,1035:0,84,255:24,0 chr2 166797689 . T . PASS END=166797694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:27:0,45,855:0,45,255:21,0 chr2 166797696 . T . PASS END=166797696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:26:0,51,765:0,78,255:17,0 chr2 166799729 . C . PASS END=166799851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:51:0,120,1800:0,135,255:40,0 chr2 166802034 . C . PASS END=166802040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,99,1403:0,99,255:40,0 chr2 166802041 . C . PASS END=166802041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:40,0 chr2 166802042 . T . PASS END=166802061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:44:0,116,1584:0,116,255:40,0 chr2 166802062 . A . PASS END=166802062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1698:0,78,255:40,0 chr2 166802063 . T . PASS END=166802200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:40:0,96,1440:0,107,255:40,0 chr2 166805904 . C . PASS END=166806014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:38:0,108,1620:0,114,255:40,0 chr2 166806016 . T . PASS END=166806016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 166806105 . C . PASS END=166806230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:81:32:0,81,1215:0,96,255:40,0 chr2 166806231 . A . PASS END=166806234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:23,0 chr2 166810195 . C . PASS END=166810196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:89:48:0,89,1645:0,89,255:40,0 chr2 166810197 . T . PASS END=166810197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:50:48:0,50,1604:0,50,255:40,0 chr2 166810198 . C . PASS END=166810199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,113,1702:0,113,255:40,0 chr2 166810200 . A . PASS END=166810200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1467:0,58,255:40,0 chr2 166810201 . T . PASS END=166810206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:86:47:0,86,1619:0,86,255:40,0 chr2 166810207 . C . PASS END=166810208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:89:48:0,89,1684:0,89,255:40,0 chr2 166810209 . A . PASS END=166810209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1645:0,75,255:40,0 chr2 166810210 . G . PASS END=166810211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:95:52:0,95,1794:0,95,255:40,0 chr2 166810212 . C . PASS END=166810212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1714:0,67,255:40,0 chr2 166810213 . C . PASS END=166810213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:89:51:0,89,1682:0,89,255:40,0 chr2 166810214 . A . PASS END=166810214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:59:51:0,59,1668:0,59,255:40,0 chr2 166810215 . T . PASS END=166810215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,122,255:40,0 chr2 166810231 . G . PASS END=166810233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 166810239 . G . PASS END=166810239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr2 166810259 . C . PASS END=166810259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1296:0,92,255:35,0 chr2 166810279 . C . PASS END=166810279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 166810290 . T . PASS END=166810290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 166810297 . G . PASS END=166810297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 166810304 . G . PASS END=166810304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:23,0 chr2 166810306 . A . PASS END=166810306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:26:0,45,675:0,78,255:15,0 chr2 166810309 . G . PASS END=166810309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:42:26:0,42,630:0,62,255:13,0 chr2 166810322 . G . PASS END=166810322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 166845766 . G . PASS END=166845766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 166845805 . C . PASS END=166845805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 166845882 . G . PASS END=166845882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1426:0,111,255:37,0 chr2 166845891 . A . PASS END=166845891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 166845960 . C . PASS END=166845961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1415:0,117,255:39,0 chr2 166846273 . C . PASS END=166846273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 166846389 . T . PASS END=166846389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 166846430 . C . PASS END=166846430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 166846458 . C . PASS END=166846458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 166846603 . T . PASS END=166846603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 166846611 . C . PASS END=166846611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 166846630 . A . PASS END=166846630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 166846634 . A . PASS END=166846634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 166846778 . A . PASS END=166846778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 166846829 . G . PASS END=166846829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 166846843 . A . PASS END=166846843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr2 166846876 . T . PASS END=166846876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1405:0,96,255:37,0 chr2 166846958 . A . PASS END=166846958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 166846981 . C . PASS END=166846981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 166847078 . C . PASS END=166847079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 166847202 . C . PASS END=166847202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 166847240 . C . PASS END=166847240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 166847295 . T . PASS END=166847295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr2 166847297 . C . PASS END=166847297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:31,0 chr2 166847381 . A . PASS END=166847381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 166847496 . A . PASS END=166847496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1467:0,107,255:36,0 chr2 166847569 . C . PASS END=166847569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 166847626 . A . PASS END=166847626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 166847755 . T . PASS END=166848934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:31:0,81,1044:0,82,255:40,1 chr2 166850618 . T . PASS END=166850926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:93:40:0,93,1427:0,93,255:40,0 chr2 166850929 . G . PASS END=166850929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr2 166852483 . G . PASS END=166852483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,189,255:40,0 chr2 166852505 . T . PASS END=166852505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr2 166852511 . G . PASS END=166852511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 166852518 . C . PASS END=166852552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,211,255:40,0 chr2 166852553 . T C, 50.00 PASS DP=81;MQ=248.08;MQRankSum=6.281;ReadPosRankSum=5.723;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,42,0:0.519,0.000:81:18,22,0:21,20,0:48:85,0,50,1473,1395,2868:255,0,255:37,0:5.0000e+01,6.5751e-05,5.2898e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,19,16,26:19,20,22,20 chr2 166852554 . T . PASS END=166852590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:68:0,120,1800:0,188,255:40,0 chr2 166852591 . T . PASS END=166852630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,111,1665:0,129,255:40,0 chr2 166854542 . A . PASS END=166854543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1412:0,101,255:39,0 chr2 166854547 . T . PASS END=166854686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,101,1431:0,101,255:40,0 chr2 166854690 . C . PASS END=166854690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 166855603 . T . PASS END=166855626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1395:0,105,255:38,0 chr2 166856228 . C . PASS END=166856229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,212,255:40,0 chr2 166856232 . C . PASS END=166856286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:76:0,120,1800:0,205,255:40,0 chr2 166856290 . T . PASS END=166856290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 166858975 . C . PASS END=166858975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 166858977 . C . PASS END=166858978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 166858980 . A . PASS END=166859264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:40:0,84,1260:0,102,255:40,0 chr2 166863740 . C . PASS END=166863803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:40:0,83,1260:0,83,255:40,0 chr2 166866223 . T . PASS END=166866223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 166866227 . A . PASS END=166866353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:34:0,91,1258:0,91,255:40,0 chr2 166866361 . C . PASS END=166866361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 166868614 . C . PASS END=166868614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 166868618 . C . PASS END=166868795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:93:39:0,93,1382:0,93,255:40,0 chr2 166870243 . A . PASS END=166870243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 166870249 . C . PASS END=166870249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 166870252 . A . PASS END=166870408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:35:0,80,1290:0,80,255:40,0 chr2 166870420 . G . PASS END=166870420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 166872115 . A . PASS END=166872210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:36:0,93,1395:0,108,255:40,0 chr2 166872211 . T . PASS END=166872211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:29,0 chr2 166872212 . G . PASS END=166872237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:33,0 chr2 166872239 . T . PASS END=166872239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 166892557 . C . PASS END=166892750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,101,1651:0,101,255:40,0 chr2 166892751 . A . PASS END=166892787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,224,255:40,0 chr2 166892788 . C T, 294.96 PASS DP=84;MQ=249.95;FractionInformativeReads=0.988 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,83,0:1.000,0.000:83:0,43,0:0,40,0:245:333,248,0,3073,248,3073:255,252,0:0,0:2.9496e+02,2.4496e+02,0.0000e+00,4.5000e+02,2.7973e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,50,33:0,0,36,47 chr2 166892789 . T . PASS END=166892825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:85:0,120,1800:0,253,255:40,0 chr2 166892826 . A . PASS END=166893038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:81:36:0,81,1175:0,81,255:40,0 chr2 166893039 . A . PASS END=166893039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:33,0 chr2 166893040 . C . PASS END=166893041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1302:0,92,255:35,0 chr2 166893050 . A . PASS END=166893050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 166894281 . C . PASS END=166894291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,917:0,72,255:26,0 chr2 166894292 . G . PASS END=166894303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:29,0 chr2 166894304 . C . PASS END=166894304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 166894305 . A . PASS END=166894322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr2 166894323 . G . PASS END=166894323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 166894324 . T . PASS END=166894332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:31,0 chr2 166894333 . T . PASS END=166894333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1094:0,49,255:29,0 chr2 166894334 . G . PASS END=166894488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1194:0,84,255:40,0 chr2 166894489 . T . PASS END=166894490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 166894491 . T . PASS END=166894491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr2 166894492 . T . PASS END=166894498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,80,255:26,0 chr2 166894499 . G . PASS END=166894521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 166894522 . A . PASS END=166894522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 166894523 . A . PASS END=166894527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 166894528 . A . PASS END=166894528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 166894529 . G . PASS END=166894529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 166894530 . A . PASS END=166894532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 166894533 . A . PASS END=166894557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 166894558 . T . PASS END=166894558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:28,0 chr2 166894559 . T . PASS END=166894563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 166894564 . G . PASS END=166894564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 166894565 . A . PASS END=166894571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 166894572 . A . PASS END=166894586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr2 166894587 . A . PASS END=166894587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 166894588 . T . PASS END=166894622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,923:0,62,255:26,0 chr2 166894623 . G . PASS END=166894629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 166894630 . T . PASS END=166894631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 166894632 . A . PASS END=166894638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 166894639 . G . PASS END=166894639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 166894640 . C . PASS END=166894640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 166894641 . A . PASS END=166894642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 166894644 . T . PASS END=166894644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 166895930 . T . PASS END=166895930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:19:35:0,19,1147:0,19,255:32,0 chr2 166895932 . C . PASS END=166895932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:11:35:0,11,1108:0,11,255:32,0 chr2 166895933 . C . PASS END=166895934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:55:35:0,55,1072:0,55,255:33,0 chr2 166895935 . A . PASS END=166895935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1330:0,68,255:36,0 chr2 166895936 . T . PASS END=166895936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:14:39:0,14,1149:0,14,255:35,0 chr2 166895937 . C . PASS END=166895937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1255:0,45,255:36,0 chr2 166895938 . G . PASS END=166895938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:31:42:0,31,1161:0,31,255:39,0 chr2 166895939 . A . PASS END=166895940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1397:0,62,255:39,0 chr2 166895941 . A . PASS END=166895941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1518:0,96,255:40,0 chr2 166895942 . T . PASS END=166895942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1374:0,57,255:40,0 chr2 166895943 . G . PASS END=166895964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:81:46:0,81,1493:0,81,255:40,0 chr2 166895965 . C . PASS END=166896105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,109,1800:0,109,255:40,0 chr2 166896106 . C . PASS END=166896107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,144,255:40,0 chr2 166896110 . A . PASS END=166896110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,122,255:40,0 chr2 166897726 . T . PASS END=166897732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,739:0,63,255:26,0 chr2 166897733 . A . PASS END=166897733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,799:0,45,255:23,0 chr2 166897734 . T . PASS END=166897735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 166897736 . C . PASS END=166897736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:23,0 chr2 166897737 . T . PASS END=166897745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,986:0,78,255:26,0 chr2 166897746 . T . PASS END=166897826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,1055:0,84,255:40,0 chr2 166897827 . A . PASS END=166897863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:54:0,120,1800:0,132,255:40,0 chr2 166897864 . A G, 211.61 PASS DP=56;MQ=247.94;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,25,0:0,30,0:162:249,165,0,2066,165,2066:255,165,0:0,0:2.1161e+02,1.6161e+02,0.0000e+00,4.5000e+02,1.9638e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,23:0,0,30,25 chr2 166897865 . A . PASS END=166897901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:55:0,120,1800:0,130,255:40,0 chr2 166897902 . G . PASS END=166897939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,154,255:40,0 chr2 166897940 . T . PASS END=166897961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:81:53:0,81,1215:0,112,255:40,0 chr2 166897962 . G . PASS END=166897967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:60:50:0,60,900:0,78,255:26,0 chr2 166897968 . A . PASS END=166897972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:42:45:0,42,630:0,104,255:18,0 chr2 166897973 . T . PASS END=166897978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:30:43:0,30,450:0,77,255:10,0 chr2 166897979 . T . PASS END=166897980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:24:43:0,24,360:0,112,255:9,0 chr2 166897981 . T . PASS END=166897981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:18:42:0,18,270:0,93,255:5,0 chr2 166897985 . T . PASS END=166897985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:15:42:0,15,225:0,87,255:4,0 chr2 166897988 . A . PASS END=166897988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:12:41:0,12,180:0,123,255:4,0 chr2 166898791 . T . PASS END=166898791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 166898799 . A . PASS END=166898799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 166898802 . C . PASS END=166898808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,884:0,61,255:27,0 chr2 166898809 . T . PASS END=166898889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:28:0,81,1103:0,82,255:40,0 chr2 166898890 . A . PASS END=166898935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,108,1620:0,108,255:40,0 chr2 166898938 . T . LowGQ END=166898938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:0:41:0,0,1139:67,0,255:36,9 chr2 166898948 . T . PASS END=166898948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr2 166900169 . A . PASS END=166900169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 166900178 . C . PASS END=166900518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:29:0,81,1086:0,87,255:40,0 chr2 166900519 . C . PASS END=166900519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 166900520 . G . PASS END=166900521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 166900522 . C . PASS END=166900544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,898:0,72,255:24,0 chr2 166900545 . G . PASS END=166900559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:18,0 chr2 166900561 . T . PASS END=166900561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 166901546 . G . PASS END=166901546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 166901550 . T . PASS END=166901550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr2 166901551 . A . PASS END=166901804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:34:0,84,1150:0,85,255:40,0 chr2 166901805 . G . PASS END=166901832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr2 166901833 . G . PASS END=166901833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 166901834 . C . PASS END=166901837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 166901840 . A . PASS END=166901840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 166903277 . T . PASS END=166903280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:25,0 chr2 166903281 . T . PASS END=166903281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 166903282 . G . PASS END=166903283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 166903284 . G . PASS END=166903288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 166903289 . C . PASS END=166903289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 166903290 . T . PASS END=166903292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:30,0 chr2 166903293 . T . PASS END=166903293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 166903294 . G . PASS END=166903298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 166903299 . T . PASS END=166903299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 166903300 . T . PASS END=166903307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 166903308 . T . PASS END=166903308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 166903309 . G . PASS END=166903310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1283:0,108,255:36,0 chr2 166903311 . T . PASS END=166903311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:34,0 chr2 166903312 . C . PASS END=166903318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1318:0,92,255:36,0 chr2 166903319 . C . PASS END=166903319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr2 166903320 . T . PASS END=166903407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:36:0,83,1248:0,83,255:40,0 chr2 166903408 . A . PASS END=166903443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1147:0,80,255:39,0 chr2 166903444 . A . PASS END=166903444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 166903445 . T C, 136.37 PASS DP=30;MQ=209.78;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,12,0:0,18,0:86:174,89,0,1105,89,1105:255,90,0:0,0:1.3637e+02,8.6372e+01,0.0000e+00,4.5000e+02,1.2114e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,15:0,0,19,11 chr2 166903446 . A . PASS END=166903446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 166903447 . C . PASS END=166903447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 166903448 . A . PASS END=166903448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 166903449 . A . PASS END=166903462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,939:0,64,255:26,0 chr2 166903463 . C . PASS END=166903465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 166903466 . T . PASS END=166903482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 166903483 . A . PASS END=166903483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 166903484 . T . PASS END=166903486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:53:23:0,53,798:0,53,255:18,0 chr2 166904132 . C . PASS END=166904132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 166904134 . C . PASS END=166904134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 166904136 . C . PASS END=166904262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:46:0,93,1395:0,105,255:40,0 chr2 166904263 . T . PASS END=166904265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:78:44:0,78,1170:0,132,255:26,0 chr2 166904266 . C . PASS END=166904267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:27,0 chr2 166904268 . C . PASS END=166904279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:64:27:0,64,870:0,64,255:25,0 chr2 166905391 . C . PASS END=166905391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 166905394 . A . PASS END=166905412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:69:0,120,1800:0,180,255:40,0 chr2 166905413 . T . PASS END=166905442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,194,255:40,0 chr2 166905443 . C . PASS END=166905460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:77:0,120,1800:0,185,255:40,0 chr2 166907826 . G . PASS END=166907826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr2 166908215 . A . PASS END=166908215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 166908224 . C . PASS END=166908224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 166908228 . C . PASS END=166908228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 166908229 . T . PASS END=166908229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:31,0 chr2 166908230 . T . PASS END=166908258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:34:0,88,1174:0,88,255:40,0 chr2 166908259 . A . PASS END=166908259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1147:0,72,255:38,0 chr2 166908260 . C . PASS END=166908485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:36:0,96,1440:0,102,255:40,0 chr2 166908486 . A . PASS END=166908486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:30,0 chr2 166908487 . T . PASS END=166908498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1294:0,92,255:34,0 chr2 166909352 . T . PASS END=166909352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 166909357 . C . PASS END=166909357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr2 166909362 . C . PASS END=166909455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:38:0,93,1398:0,93,255:40,0 chr2 166909544 . C T, 43.21 PASS DP=49;MQ=205.43;MQRankSum=1.275;ReadPosRankSum=3.183;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:31,18,0:0.367,0.000:49:14,6,0:17,12,0:43:78,0,50,557,1109,1666:255,0,255:30,0:4.3209e+01,2.2910e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,12,6:18,13,4,14:166909544 chr2 166909549 . C . PASS END=166909558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:50:0,120,1798:0,120,255:40,0 chr2 166909559 . C A, 193.10 PASS DP=50;MQ=202.93;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,49,0:1.000,0.000:49:0,19,0:0,30,0:143:231,146,0,1796,146,1796:255,153,0:0,0:1.9310e+02,1.4310e+02,0.0000e+00,4.5000e+02,1.7787e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,23:0,0,24,25:166909544 chr2 166909560 . G . PASS END=166909596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,124,255:40,0 chr2 166909597 . G . PASS END=166909640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,118,1800:0,118,255:40,0 chr2 166911141 . C . PASS END=166911141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 166911145 . T . PASS END=166911145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 166911147 . C . PASS END=166911277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:40:0,107,1486:0,107,255:40,0 chr2 166912916 . C . PASS END=166912916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 166912920 . C . PASS END=166913015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:67:0,120,1800:0,191,255:40,0 chr2 166913022 . T . PASS END=166913022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 166915075 . G . PASS END=166915075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 166915078 . A . PASS END=166915199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:41:0,111,1665:0,123,255:40,0 chr2 166915201 . G . PASS END=166915201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 166929860 . A . PASS END=166929860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,579:0,49,255:20,0 chr2 166929863 . C . PASS END=166929870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 166929871 . C . PASS END=166929872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 166929873 . T . PASS END=166929877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 166929878 . A . PASS END=166930131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:30:0,81,1111:0,86,255:40,0 chr2 167051756 . T . PASS END=167051756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 167051900 . T . PASS END=167051900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 167051978 . C . PASS END=167051978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,102,1530:0,110,255:33,0 chr2 167051980 . A . PASS END=167051980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr2 167052080 . G . PASS END=167052080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 167052088 . T . PASS END=167052088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 167052129 . C . PASS END=167052129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 167052196 . A . PASS END=167052196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:38:0,93,1395:0,114,255:31,0 chr2 167052237 . G . PASS END=167052237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 167052254 . C . PASS END=167052254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 167052322 . G . PASS END=167052322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 167052838 . G . PASS END=167052838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr2 167052954 . C . PASS END=167052954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr2 167052956 . A . PASS END=167052956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 167052960 . A . PASS END=167052960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 167052991 . C . PASS END=167052991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 167053104 . G . PASS END=167053104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 167053367 . A . PASS END=167053367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 167053412 . T . PASS END=167053412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,190,255:40,0 chr2 167053447 . G . PASS END=167053447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 167053539 . A . PASS END=167053539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,234,255:40,0 chr2 167053577 . A . PASS END=167053577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:73:0,120,1800:0,203,255:40,0 chr2 167053760 . A . PASS END=167053760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 167053765 . T . PASS END=167053765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr2 167053799 . C . PASS END=167053799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 167053825 . G . PASS END=167053825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 167054168 . C . PASS END=167054168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 167054234 . C . PASS END=167054234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 167054282 . A . PASS END=167054282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 167054295 . A . PASS END=167054295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 167054347 . G . PASS END=167054347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 167054397 . G . PASS END=167054397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:85:44:0,85,1462:0,85,255:27,0 chr2 167054513 . T . PASS END=167054513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1511:0,110,255:40,0 chr2 167054690 . T . PASS END=167054690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 167054772 . T . PASS END=167054772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr2 167054774 . T . PASS END=167054774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr2 167054945 . G . PASS END=167054945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 167054956 . T . PASS END=167054956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 167054965 . C . PASS END=167054965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 167055014 . C . PASS END=167055014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,184,255:40,0 chr2 167055018 . C . PASS END=167055018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 167055023 . A . PASS END=167055023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 167055058 . T . PASS END=167055058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 167055182 . C . PASS END=167056370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:37:0,81,1215:0,88,255:40,1 chr2 167056371 . A . PASS END=167056374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:34:0,63,945:0,102,255:21,0 chr2 167060465 . C . PASS END=167060467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:41:0,84,1427:0,84,255:40,0 chr2 167060468 . C . PASS END=167060468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:40,0 chr2 167060469 . A . PASS END=167060475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:93:44:0,93,1537:0,93,255:40,0 chr2 167060476 . A . PASS END=167060476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:61:50:0,61,1512:0,61,255:40,0 chr2 167060477 . T . PASS END=167060486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,101,1686:0,101,255:40,0 chr2 167060487 . C . PASS END=167060735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:33:0,90,1350:0,97,255:40,0 chr2 167060861 . T . PASS END=167060861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 167060865 . T . PASS END=167060865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 167060869 . C . PASS END=167060933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,114,1710:0,132,255:40,0 chr2 167060934 . T . PASS END=167060947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1215:0,120,255:34,0 chr2 167060948 . T . PASS END=167060965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:34:0,60,900:0,85,255:25,0 chr2 167060966 . A . PASS END=167060975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:48:32:0,48,720:0,61,255:19,0 chr2 167083077 . C . PASS END=167083214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:40:0,103,1382:0,103,255:40,0 chr2 167083217 . A . PASS END=167083217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 167084180 . A . PASS END=167084233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,228,255:40,0 chr2 167084238 . A . PASS END=167084238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr2 167085201 . A . PASS END=167085471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:30:0,81,1166:0,90,255:40,0 chr2 167085472 . T . PASS END=167085482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,77,255:26,0 chr2 167085484 . T . PASS END=167085484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,68,255:19,0 chr2 167085495 . A . PASS END=167085495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:17,0 chr2 167089850 . C . PASS END=167089972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:84:35:0,84,1205:0,84,255:40,0 chr2 167089975 . A . PASS END=167089975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 167094604 . A . PASS END=167094777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:39:0,102,1495:0,102,255:40,0 chr2 167099004 . T . PASS END=167099004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 167099012 . C . PASS END=167099120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:42:0,120,1800:0,124,255:40,0 chr2 167099121 . C . PASS END=167099157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,105,1575:0,145,255:40,0 chr2 167099158 . A G, 48.07 PASS DP=59;MQ=250.00;MQRankSum=6.512;ReadPosRankSum=1.480;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,25,0:0.424,0.000:59:17,11,0:17,14,0:47:83,0,50,894,1208,2102:255,0,255:22,0:4.8066e+01,8.9566e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,20,10,15:19,15,8,17 chr2 167099159 . T . PASS END=167099166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,102,1530:0,120,255:34,0 chr2 167108275 . C . PASS END=167108395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:38:0,108,1620:0,114,255:40,0 chr2 167115792 . T . PASS END=167115797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,113,1604:0,113,255:40,0 chr2 167128904 . C . PASS END=167128904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1335:0,105,255:35,0 chr2 167128909 . C . PASS END=167129385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:35:0,99,1476:0,105,255:40,1 chr2 167129390 . A . PASS END=167129390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 167133439 . T . PASS END=167133849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:85:34:0,85,1166:0,85,255:40,0 chr2 167133859 . A . PASS END=167133859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 167134635 . T . PASS END=167134823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:49:0,120,1800:0,130,255:40,0 chr2 167136867 . C . PASS END=167137081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,108,1613:0,108,255:40,0 chr2 167137082 . A . PASS END=167137105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,105,1575:0,110,255:40,0 chr2 167137113 . A . PASS END=167137113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:38:0,96,1440:0,97,255:31,0 chr2 167138182 . T . PASS END=167138182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1527:0,120,255:40,0 chr2 167138184 . C . PASS END=167138185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 167138189 . C . PASS END=167138275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,107,1607:0,107,255:40,0 chr2 167138276 . A . PASS END=167138318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:54:0,117,1755:0,146,255:40,0 chr2 167138326 . A . PASS END=167138326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,112,1799:0,112,255:40,0 chr2 167140963 . G . PASS END=167141219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,92,255:40,0 chr2 167141220 . C . PASS END=167141220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1133:0,65,255:27,0 chr2 167141221 . A . PASS END=167141232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1161:0,80,255:31,0 chr2 167141233 . A . PASS END=167141233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 167141234 . G . PASS END=167141247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 167141248 . A . PASS END=167141248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1127:0,63,255:30,0 chr2 167141249 . T . PASS END=167141249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1062:0,52,255:29,0 chr2 167141250 . C . PASS END=167141258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1105:0,85,255:33,0 chr2 167141259 . T . PASS END=167141259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:31,0 chr2 167141260 . G . PASS END=167141268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1211:0,98,255:33,0 chr2 167141269 . A . PASS END=167141269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:29,0 chr2 167141270 . C . PASS END=167141308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:30:0,82,1109:0,82,255:31,0 chr2 167141309 . A . PASS END=167141309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 167141310 . A . PASS END=167141312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 167141313 . A . PASS END=167141334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,67,255:25,0 chr2 167142840 . T . PASS END=167142841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 167142846 . C . PASS END=167142850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 167142851 . T . PASS END=167142852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,984:0,68,255:27,0 chr2 167142853 . G . PASS END=167142854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 167142855 . G . PASS END=167142855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 167142856 . G . PASS END=167143097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:32:0,90,1168:0,95,255:40,0 chr2 167143098 . A . PASS END=167143133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 167144940 . A . PASS END=167144940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 167144942 . A . PASS END=167144942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 167144944 . T . PASS END=167144944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 167144946 . C . PASS END=167144973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,120,1800:0,122,255:40,0 chr2 167144974 . A T, 48.28 PASS DP=52;MQ=250.00;MQRankSum=6.103;ReadPosRankSum=3.491;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,22,0:0.423,0.000:52:13,15,0:17,7,0:47:83,0,50,779,978,1758:255,0,255:31,0:4.8276e+01,8.6460e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,17,19,3:12,18,16,6 chr2 167144975 . C . PASS END=167144994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:54:0,120,1800:0,156,255:40,0 chr2 167144995 . T C, 49.84 PASS DP=65;MQ=250.00;MQRankSum=6.915;ReadPosRankSum=2.712;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,31,0:0.477,0.000:65:16,22,0:18,9,0:48:85,0,50,1098,1171,2270:255,0,255:35,0:4.9842e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,14,21,10:16,18,18,13 chr2 167144996 . T . PASS END=167145032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:67:0,120,1800:0,140,255:40,0 chr2 167145033 . G . PASS END=167145104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,154,255:40,0 chr2 167145105 . T . PASS END=167145141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:39:0,84,1260:0,117,255:40,0 chr2 167145142 . A G, 49.95 PASS DP=39;MQ=250.00;MQRankSum=5.324;ReadPosRankSum=0.183;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,19,0:0.487,0.000:39:9,10,0:11,9,0:48:85,0,50,680,715,1395:255,0,255:18,0:4.9946e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,15,7,12:8,12,12,7 chr2 167145143 . G . PASS END=167145153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:28:0,72,1080:0,84,255:26,0 chr2 167149741 . C . PASS END=167149882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:30:0,84,1260:0,90,255:40,0 chr2 167149884 . T . PASS END=167149884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 167149892 . A . PASS END=167149892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 167151096 . A . PASS END=167151096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr2 167151108 . C . PASS END=167151172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:84:0,120,1800:0,204,255:40,0 chr2 167151174 . T . PASS END=167151174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 167159595 . C . PASS END=167159596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:33,0 chr2 167159600 . T . PASS END=167159812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:33:0,90,1188:0,94,255:40,0 chr2 167159818 . A . PASS END=167159818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 167160541 . C . PASS END=167160632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:74:0,120,1800:0,183,255:40,0 chr2 167160739 . A . PASS END=167160739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 167160748 . C . PASS END=167160839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,121,255:40,0 chr2 167162294 . G . PASS END=167162294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 167162302 . G . PASS END=167162314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,147,255:40,0 chr2 167162315 . C . PASS END=167162430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:35:0,96,1440:0,104,255:40,0 chr2 167162437 . A . PASS END=167162437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 167163020 . T . PASS END=167163042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,152,255:40,0 chr2 167163043 . T C, 45.16 PASS DP=63;MQ=250.00;MQRankSum=6.617;ReadPosRankSum=2.654;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,24,0:0.381,0.000:63:21,12,0:18,12,0:44:80,0,50,830,1313,2143:255,0,255:37,0:4.5161e+01,1.5402e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,16,8,16:23,16,12,12 chr2 167163044 . G . PASS END=167163080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,112,1624:0,112,255:40,0 chr2 167163081 . T . PASS END=167163109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,105,1575:0,120,255:40,0 chr2 167163461 . G . PASS END=167163461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 167163466 . G . PASS END=167163584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:69:0,120,1800:0,177,255:40,0 chr2 167163779 . T . PASS END=167163787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,170,255:40,0 chr2 167168008 . C . PASS END=167168018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 167168019 . G . PASS END=167168023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:19,0 chr2 167168024 . G . PASS END=167168036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,831:0,66,255:26,0 chr2 167168037 . T . PASS END=167168055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1039:0,81,255:36,0 chr2 167168056 . C . PASS END=167168092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,102,1530:0,111,255:40,0 chr2 167168093 . C T, 49.95 PASS DP=42;MQ=250.00;MQRankSum=5.528;ReadPosRankSum=4.470;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:13,11,0:9,9,0:48:85,0,50,658,598,1256:255,0,255:21,0:4.9950e+01,6.5751e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,4,14,6:11,11,11,9 chr2 167168094 . T . PASS END=167168130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,110,1512:0,110,255:40,0 chr2 167168131 . C . PASS END=167168131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,6:46:15:46:0,15,1051:0,15,255:40,0 chr2 167168132 . T . PASS END=167168266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,126,255:40,0 chr2 167168297 . C . PASS END=167168297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 167168308 . A . PASS END=167168308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 167232248 . C . PASS END=167232248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 167232282 . C . PASS END=167232282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 167232433 . G . PASS END=167232433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 167232480 . G . PASS END=167232480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 167232495 . C . PASS END=167232495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 167232504 . C . PASS END=167232504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 167262090 . T . PASS END=167262168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:39:0,95,1375:0,95,255:40,0 chr2 167262169 . T C, 214.60 PASS DP=56;MQ=249.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,32,0:0,24,0:165:252,168,0,2078,168,2078:255,171,0:0,0:2.1460e+02,1.6460e+02,0.0000e+00,4.5000e+02,1.9937e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,24:0,0,30,26 chr2 167262170 . C . PASS END=167262206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,135,255:40,0 chr2 167262207 . A . PASS END=167262315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:87:35:0,87,1227:0,88,255:40,0 chr2 167262316 . G . PASS END=167262352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1255:0,89,255:35,0 chr2 167262353 . C G, 155.35 PASS DP=36;MQ=249.94;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1388,108,1388:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,19:0,0,15,21 chr2 167262354 . A . PASS END=167262390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:36:0,95,1208:0,95,255:40,0 chr2 167262391 . T . PASS END=167262408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,104,1457:0,104,255:40,0 chr2 167262409 . A . PASS END=167262409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1364:0,76,255:37,0 chr2 167262410 . T . PASS END=167262901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:41:0,90,1369:0,90,255:40,2 chr2 167262902 . C . PASS END=167262938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,147,255:40,0 chr2 167262939 . A G, 228.75 PASS DP=61;MQ=249.95;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,35,0:0,26,0:179:267,182,0,2223,182,2223:255,183,0:0,0:2.2875e+02,1.7875e+02,0.0000e+00,4.5000e+02,2.1352e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,30:0,0,25,36 chr2 167262940 . T . PASS END=167262976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:59:0,120,1800:0,153,255:40,0 chr2 167262977 . A . PASS END=167263152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:42:0,81,1215:0,103,255:40,0 chr2 167263153 . A . PASS END=167263156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:41:0,78,1170:0,110,255:26,0 chr2 167266175 . C . PASS END=167266445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:87:42:0,87,1479:0,87,255:40,0 chr2 167266730 . T . PASS END=167266834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:45:0,80,1582:0,80,255:40,0 chr2 167269040 . C . PASS END=167269177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:99:58:0,120,1800:0,134,255:40,0 chr2 167269578 . A . PASS END=167269591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:87:0,120,1800:0,231,255:40,0 chr2 167269592 . T . PASS END=167269628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:82:0,120,1800:0,223,255:40,0 chr2 167269629 . T G, 282.89 PASS DP=82;MQ=250.00;MQRankSum=1.690;ReadPosRankSum=1.436;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,81,0:0.988,0.000:82:1,41,0:0,40,0:233:321,236,0,3057,243,3071:255,213,0:2,0:2.8289e+02,2.3289e+02,0.0000e+00,4.5000e+02,2.7463e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,31,50:0,1,39,42 chr2 167269630 . G . PASS END=167269631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr2 167273217 . T . PASS END=167273489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:38:0,84,1180:0,84,255:40,0 chr2 167273490 . A . PASS END=167273490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:27,0 chr2 167273491 . A . PASS END=167273491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr2 167273492 . C . PASS END=167273495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,111,255:25,0 chr2 167277700 . C . LowGQ END=167277700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,10:48:0:48:0,0,1062:22,0,255:37,0 chr2 167277701 . T . PASS END=167277807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:47:0,111,1682:0,111,255:40,0 chr2 167279769 . A . PASS END=167279782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:40:0,87,1476:0,87,255:40,0 chr2 167279783 . A . PASS END=167279783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:59:46:0,59,1332:0,59,255:40,0 chr2 167279784 . G . PASS END=167279884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:46:0,112,1800:0,112,255:40,0 chr2 167279885 . C . PASS END=167279921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:49:0,90,1350:0,130,255:40,0 chr2 167279922 . C A, 193.10 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,28,0:0,21,0:143:231,146,0,1796,146,1796:255,147,0:0,0:1.9310e+02,1.4310e+02,0.0000e+00,4.5000e+02,1.7787e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,31:0,0,27,22 chr2 167279923 . A . PASS END=167279924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:49:0,81,1215:0,147,255:27,0 chr2 167279925 . A . PASS END=167279925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:78:47:0,78,1170:0,108,255:24,0 chr2 167279926 . T . PASS END=167279930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:48:0,81,1215:0,144,255:28,0 chr2 167279931 . A . PASS END=167279942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,77,255:26,0 chr2 167284298 . C . PASS END=167284452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:95:36:0,95,1319:0,95,255:40,0 chr2 167285679 . C . PASS END=167285784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:40:0,103,1312:0,103,255:40,0 chr2 167288828 . C . PASS END=167289238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:93:35:0,93,1395:0,103,255:40,0 chr2 167289239 . C . PASS END=167289239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:32,0 chr2 167289240 . A . PASS END=167289260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1213:0,86,255:33,0 chr2 167289261 . A . PASS END=167289261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 167289262 . C . PASS END=167289262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:26,0 chr2 167292857 . C . PASS END=167292865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 167292866 . G . PASS END=167292881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 167292882 . C T, 80.11 PASS DP=11;MQ=244.61;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,0:1.000,0.000:11:0,4,0:0,7,0:30:118,33,0,427,33,427:255,33,0:0,0:8.0111e+01,3.0111e+01,4.2365e-03,4.2357e+02,6.4881e+01,4.2658e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,5:0,0,5,6 chr2 167292883 . T . PASS END=167292890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 167292891 . G . PASS END=167292891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 167292892 . A . PASS END=167292892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 167292893 . A . PASS END=167292919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 167292920 . T . PASS END=167292938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr2 167292939 . G . PASS END=167292947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 167292948 . G . LowGQ END=167292948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,241:0,0,241:5,0 chr2 167292949 . C . PASS END=167292950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 167297831 . T . PASS END=167298262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:89:50:0,89,1800:0,89,255:40,0 chr2 167300013 . C . PASS END=167300186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:98:49:0,98,1651:0,98,255:40,0 chr2 167301272 . C . PASS END=167301510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:39:0,100,1329:0,100,255:40,0 chr2 167304122 . C . PASS END=167304218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:40:0,87,1386:0,87,255:40,0 chr2 167313380 . C . PASS END=167313380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 167313381 . T . PASS END=167313413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,110,1565:0,110,255:40,0 chr2 167313414 . C . PASS END=167313450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:44:0,97,1515:0,97,255:40,0 chr2 167313451 . T C, 197.02 PASS DP=50;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,28,0:0,22,0:147:235,150,0,1884,150,1884:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,26:0,0,30,20 chr2 167313452 . T . PASS END=167313488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,134,255:40,0 chr2 167313489 . G . PASS END=167313585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:92:37:0,92,1341:0,92,255:40,0 chr2 167313586 . T . PASS END=167313586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1158:0,78,255:30,0 chr2 167318899 . C . PASS END=167319040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:52:0,120,1800:0,156,255:40,0 chr2 167321972 . C . PASS END=167322041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:83:0,120,1800:0,231,255:40,0 chr2 167322291 . C . PASS END=167322497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:33:0,81,1215:0,89,255:40,0 chr2 167327125 . C . PASS END=167327216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:56:0,120,1800:0,141,255:40,0 chr2 167328827 . T . PASS END=167328955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,112,1737:0,112,255:40,0 chr2 167330309 . T . PASS END=167330398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,162,255:40,0 chr2 167330402 . G . PASS END=167330402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 167330735 . T . PASS END=167330854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:82:0,120,1800:0,208,255:40,0 chr2 167333973 . A . PASS END=167333977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 167333978 . T . PASS END=167333978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 167333979 . T . PASS END=167333983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 167333984 . T . PASS END=167333984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 167333985 . G . PASS END=167333985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 167333986 . T . PASS END=167333990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,900:0,61,255:26,0 chr2 167333991 . A . PASS END=167333992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 167333993 . A . PASS END=167333993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:28,0 chr2 167333994 . T . PASS END=167333994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 167333995 . G . PASS END=167333995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 167333996 . G . PASS END=167334047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,1019:0,87,255:40,0 chr2 167334048 . A . PASS END=167334084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,129,255:40,0 chr2 167334085 . G T, 230.58 PASS DP=61;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,28,0:0,33,0:181:268,184,0,2339,184,2339:255,183,0:0,0:2.3058e+02,1.8058e+02,0.0000e+00,4.5000e+02,2.1535e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,30:0,0,30,31 chr2 167334086 . T . PASS END=167334122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,156,255:40,0 chr2 167334123 . T . PASS END=167334196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:40:0,93,1395:0,110,255:40,0 chr2 167334197 . A . PASS END=167334197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:31,0 chr2 167334198 . A . PASS END=167334206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr2 167747700 . A . PASS END=167747705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,209,255:40,0 chr2 167759978 . A . PASS END=167759983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr2 167759984 . G . PASS END=167759985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 167759986 . C . PASS END=167759989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 167759990 . T . PASS END=167759990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 167759991 . C . PASS END=167759991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 167759992 . C . PASS END=167760001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,939:0,66,255:25,0 chr2 167760002 . A . PASS END=167760367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:30:0,85,1139:0,85,255:40,0 chr2 167760368 . A . PASS END=167760368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:52:38:0,52,1213:0,52,255:32,0 chr2 167760369 . G . PASS END=167760392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,85,255:33,0 chr2 167760393 . G . PASS END=167760400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,83,255:26,0 chr2 167991355 . C . PASS END=167991355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 167992419 . G . PASS END=167992572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,102,1570:0,102,255:40,0 chr2 168041052 . C . PASS END=168041114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:54:0,120,1800:0,162,255:40,0 chr2 168041115 . C . PASS END=168041150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,126,255:40,0 chr2 168067245 . C . PASS END=168067247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:26,0 chr2 168067248 . C . PASS END=168067248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 168067249 . T . PASS END=168067249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 168067250 . G . PASS END=168067251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 168067252 . T . PASS END=168067252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,929:0,62,255:25,0 chr2 168067253 . G . PASS END=168067256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 168067257 . C . PASS END=168067257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 168067258 . T . PASS END=168067272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,859:0,81,255:30,0 chr2 168067273 . T . PASS END=168067273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 168067274 . G . PASS END=168067299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1048:0,90,255:35,0 chr2 168067300 . G . PASS END=168067300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr2 168067301 . G . PASS END=168067382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:30:0,82,1260:0,82,255:38,0 chr2 168067383 . A . PASS END=168067383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 168067384 . C . PASS END=168067390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 168067391 . A . PASS END=168067405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,940:0,70,255:26,0 chr2 168074676 . A . PASS END=168074810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:80:44:0,80,1596:0,80,255:40,0 chr2 168096365 . G . PASS END=168096475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,153,255:40,0 chr2 168097174 . G . PASS END=168097246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:89:0,120,1800:0,250,255:40,0 chr2 168098287 . T . PASS END=168098420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:45:0,102,1566:0,102,255:40,0 chr2 168099079 . A . PASS END=168099584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:88:38:0,88,1335:0,88,255:40,0 chr2 168099585 . A . PASS END=168099585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:45:41:0,45,1327:0,45,255:35,0 chr2 168099586 . G . PASS END=168099586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr2 168099587 . A . PASS END=168099587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1303:0,73,255:34,0 chr2 168099588 . A . PASS END=168099696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:39:0,100,1297:0,100,255:40,0 chr2 168099697 . A . PASS END=168099697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1241:0,53,255:33,0 chr2 168099698 . T . PASS END=168101018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:80:37:0,80,1320:0,80,255:40,0 chr2 168101019 . T . PASS END=168101020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1596:0,64,255:40,0 chr2 168101021 . G . PASS END=168103937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:84:36:0,84,1333:0,84,255:40,1 chr2 168103938 . A . PASS END=168103938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1258:0,77,255:31,0 chr2 168103939 . A . PASS END=168103962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1303:0,84,255:37,0 chr2 168103963 . G . PASS END=168103963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1349:0,70,255:36,0 chr2 168103964 . C . PASS END=168103974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1364:0,87,255:39,0 chr2 168103975 . A . PASS END=168103975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1402:0,73,255:33,0 chr2 168103976 . C . PASS END=168104149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1260:0,84,255:40,0 chr2 168104150 . T . PASS END=168104150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:36,0 chr2 168104151 . A . PASS END=168104359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:38:0,84,1248:0,84,255:40,0 chr2 168104360 . T . PASS END=168104360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:43:40:0,43,1351:0,43,255:35,0 chr2 168104361 . A . PASS END=168105143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:32:0,87,1148:0,87,255:40,0 chr2 168105144 . A . PASS END=168105144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:33,0 chr2 168105145 . A . PASS END=168106392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:95:37:0,95,1349:0,95,255:40,0 chr2 168106393 . A . PASS END=168106393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1731:0,73,255:40,0 chr2 168106394 . A . PASS END=168106685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:80:42:0,80,1449:0,80,255:40,0 chr2 168106686 . C . PASS END=168106686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:47:45:0,47,1396:0,47,255:38,0 chr2 168106687 . T . PASS END=168106688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:45:0,96,1607:0,96,255:40,0 chr2 168106689 . T . PASS END=168106689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1482:0,77,255:38,0 chr2 168106690 . G . PASS END=168107226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:93:41:0,93,1485:0,93,255:40,0 chr2 168107227 . A . PASS END=168107227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:44:60:0,44,1675:0,44,255:40,0 chr2 168107228 . T . PASS END=168108453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:31:0,85,1180:0,85,255:40,0 chr2 168108454 . A . PASS END=168108454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 168108455 . G . PASS END=168108457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 168110542 . A . PASS END=168110549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,644:0,41,255:19,0 chr2 168110550 . G . PASS END=168110566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:24,0 chr2 168110567 . T . PASS END=168110586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:29,0 chr2 168110587 . A . PASS END=168110587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:28,0 chr2 168110588 . C . PASS END=168110591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1072:0,90,255:30,0 chr2 168110592 . T . PASS END=168110592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 168110593 . T . PASS END=168110675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:31:0,93,1170:0,93,255:40,0 chr2 168114367 . T . PASS END=168114966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:45:0,101,1665:0,101,255:40,0 chr2 168114967 . T . LowGQ END=168114967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,15:90:0:90:0,0,2205:30,0,255:40,0 chr2 168114968 . G . PASS END=168115873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,3:71:99:46:0,114,1800:0,114,255:40,2 chr2 168725550 . A . PASS END=168725553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:18,0 chr2 168725554 . C . PASS END=168725554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 168725555 . T . PASS END=168725555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 168725556 . T . PASS END=168725556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 168725557 . C . PASS END=168725557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 168725558 . A . PASS END=168725590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,862:0,72,255:26,0 chr2 168725591 . G . PASS END=168725592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 168725593 . G . PASS END=168725593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 168725594 . C . PASS END=168726465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:29:0,82,1042:0,82,255:40,0 chr2 168726466 . T . PASS END=168726466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:53:40:0,53,1089:0,53,255:32,0 chr2 168726467 . C . PASS END=168726497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1189:0,86,255:33,0 chr2 168726498 . G . PASS END=168726498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:27,0 chr2 168726499 . A . PASS END=168726501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 168726502 . T . PASS END=168726502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 168726503 . G . PASS END=168726515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 168726516 . C . PASS END=168726516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 168726517 . A . PASS END=168726517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 168726518 . T . PASS END=168726518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,846:0,51,255:25,0 chr2 168726519 . C . PASS END=168726519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 168726520 . T . PASS END=168726520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 168726521 . C . PASS END=168726521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 168726522 . A . PASS END=168726526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 168726527 . T . PASS END=168726527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 168726528 . T . PASS END=168726528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 168726529 . A . PASS END=168726530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 168812006 . T . PASS END=168812080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,120,255:40,0 chr2 168819812 . T . PASS END=168819856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,120,1800:0,177,255:40,0 chr2 168821172 . C . PASS END=168821236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,184,255:40,0 chr2 168869144 . C . PASS END=168869212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,132,255:40,0 chr2 168873553 . C . PASS END=168873605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:83:0,120,1800:0,249,255:40,0 chr2 168892035 . T . PASS END=168892044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,165,255:40,0 chr2 168920010 . C . PASS END=168920080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,105,1518:0,107,255:40,0 chr2 168921829 . C . PASS END=168921891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:51:0,120,1800:0,146,255:40,0 chr2 168931492 . C . PASS END=168931521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,182,255:40,0 chr2 168931619 . C . PASS END=168931741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,108,1620:0,132,255:40,0 chr2 168968014 . T . PASS END=168968106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:72:0,120,1800:0,207,255:40,0 chr2 168986051 . C . PASS END=168986116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,164,255:40,0 chr2 168986220 . C . PASS END=168986268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,131,255:40,0 chr2 168994598 . C . PASS END=168994731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:97:45:0,97,1485:0,97,255:40,0 chr2 168996799 . T . PASS END=168996812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,142,255:40,0 chr2 168996813 . A . PASS END=168996900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,121,255:40,0 chr2 168997159 . C . PASS END=168997268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:46:0,102,1513:0,105,255:40,0 chr2 169018297 . C . PASS END=169018352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:85:0,120,1800:0,239,255:40,0 chr2 169020152 . C . PASS END=169020165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,115,1800:0,115,255:40,0 chr2 169020166 . G A, 220.64 PASS DP=58;MQ=173.22;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,58,0:1.000,0.000:58:0,32,0:0,26,0:171:258,174,0,2166,174,2166:255,177,0:0,0:2.2064e+02,1.7064e+02,0.0000e+00,4.5000e+02,2.0541e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,43,15:0,0,31,27:169020166 chr2 169020167 . T . PASS END=169020178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,159,255:40,0 chr2 169020179 . C T, 251.66 PASS DP=68;MQ=172.56;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,68,0:1.000,0.000:68:0,38,0:0,30,0:202:289,205,0,2628,205,2628:255,207,0:0,0:2.5166e+02,2.0166e+02,0.0000e+00,4.5000e+02,2.3643e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,46,22:0,0,32,36:169020166 chr2 169020180 . A . PASS END=169020186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:71:0,120,1800:0,197,255:40,0 chr2 169020187 . G A, 41.37 PASS DP=80;MQ=176.10;MQRankSum=0.227;ReadPosRankSum=1.569;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,28,0:0.350,0.000:80:28,16,0:24,12,0:41:76,0,50,833,1860,2693:255,0,255:40,0:4.1370e+01,3.3860e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:37,15,17,11:27,25,11,17 chr2 169020188 . C . PASS END=169020226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:81:0,120,1800:0,209,255:40,0 chr2 169020227 . A . PASS END=169020231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:85:0,120,1800:0,239,255:40,0 chr2 169020249 . C . PASS END=169020390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:49:0,114,1710:0,134,255:40,0 chr2 169023809 . C . PASS END=169023917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,104,1360:0,104,255:40,0 chr2 169038488 . T . PASS END=169038600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:35:0,84,1260:0,94,255:40,0 chr2 169041386 . T G, 146.31 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,22,0:0,11,0:96:184,99,0,1263,99,1263:255,99,0:0,0:1.4631e+02,9.6315e+01,0.0000e+00,4.5000e+02,1.3108e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,17:0,0,11,22 chr2 169103738 . C . PASS END=169103786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,304:0,27,255:9,0 chr2 169103787 . A . PASS END=169103792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr2 169103793 . T . PASS END=169103795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:5,0 chr2 169103796 . C . LowGQ END=169103842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:2:0,0,0:0,0,30:3,0 chr2 169103843 . G . PASS END=169103861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:5,0 chr2 169103862 . C . PASS END=169103864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr2 169103865 . G . LowGQ END=169103869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:14,0,212:7,1 chr2 169103870 . C . PASS END=169103881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 169103882 . C . PASS END=169103885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr2 169103886 . C . PASS END=169103887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 169103888 . C . PASS END=169103888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:17,0 chr2 169103889 . C . PASS END=169103889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 169103890 . G . PASS END=169103890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr2 169103891 . G . PASS END=169103907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,674:0,54,255:19,0 chr2 169103908 . A . PASS END=169103916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 169103917 . T . PASS END=169103917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr2 169103918 . G . PASS END=169103936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 169103937 . C . PASS END=169103945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 169312959 . A . PASS END=169313000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,806:0,63,255:26,0 chr2 169313001 . C . PASS END=169313002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 169313003 . C . PASS END=169313010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 169313011 . A . PASS END=169313011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 169313012 . T . PASS END=169313013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 169313014 . T . PASS END=169313079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:33,0 chr2 169313080 . C . PASS END=169313086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 169313087 . C . PASS END=169313091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 169313092 . C . PASS END=169313096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 169313097 . T . PASS END=169313106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:27,0 chr2 169313107 . T . PASS END=169313123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,917:0,62,255:26,0 chr2 169313124 . G . PASS END=169313126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,62,255:19,0 chr2 169313127 . A . PASS END=169313127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,792:0,23,255:18,0 chr2 169313128 . G . PASS END=169313128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,62,255:19,0 chr2 169389091 . G . PASS END=169389091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 169404106 . A . PASS END=169404207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1101:0,80,255:40,0 chr2 169404208 . A . PASS END=169404208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 169404209 . A . PASS END=169404209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 169404210 . A . PASS END=169404210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr2 169404211 . G . PASS END=169404211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 169417702 . C . PASS END=169417707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,915:0,75,255:26,0 chr2 169417708 . G . PASS END=169417718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:31,0 chr2 169417719 . A . PASS END=169417719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1056:0,69,255:30,0 chr2 169417720 . T . PASS END=169417729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr2 169417730 . T . PASS END=169417730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,997:0,65,255:30,0 chr2 169417731 . C . PASS END=169417827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,85,255:40,0 chr2 169417828 . A . PASS END=169417832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1027:0,76,255:26,0 chr2 169487495 . G . PASS END=169487552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:68:0,120,1800:0,171,255:40,0 chr2 169541839 . A . PASS END=169541880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,186,255:40,0 chr2 169547544 . A . PASS END=169547594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,167,255:40,0 chr2 169551469 . C . PASS END=169551561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:46:0,120,1800:0,138,255:40,0 chr2 169571511 . G . PASS END=169571639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:35:0,81,1349:0,81,255:40,0 chr2 169574382 . G . PASS END=169574488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:57:0,120,1800:0,151,255:40,0 chr2 169602917 . A . PASS END=169602917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1369:0,120,255:40,0 chr2 169613681 . G . PASS END=169613699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:40:0,90,1372:0,90,255:40,0 chr2 169622102 . G . PASS END=169622258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1215:0,92,255:40,0 chr2 169622832 . G . PASS END=169622855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:70:0,120,1800:0,178,255:40,0 chr2 169626020 . G . PASS END=169626031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,930:0,69,255:24,0 chr2 169626032 . G . PASS END=169626032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr2 169626033 . A . PASS END=169626041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,925:0,62,255:26,0 chr2 169626042 . A . PASS END=169626123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1027:0,80,255:38,0 chr2 169626124 . T . PASS END=169626130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,77,255:24,0 chr2 169626131 . A . PASS END=169626131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:21,0 chr2 169626132 . A . PASS END=169626137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr2 169626138 . A . PASS END=169626138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:22,0 chr2 169626139 . T . PASS END=169626145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 169626146 . A . PASS END=169626146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 169626147 . C . PASS END=169626160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 169626161 . A . PASS END=169626164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,762:0,52,255:22,0 chr2 169626165 . A . PASS END=169626168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 169626169 . T . PASS END=169626169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:19,0 chr2 169626170 . T . PASS END=169626172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 169659157 . A . PASS END=169659157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1382:0,71,255:40,0 chr2 169659158 . T . PASS END=169659183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:42:0,88,1520:0,88,255:40,0 chr2 169668077 . T . PASS END=169668162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:57:0,120,1800:0,155,255:40,0 chr2 169674682 . A . PASS END=169674685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr2 169674686 . G . PASS END=169674687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 169674688 . G . PASS END=169674690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr2 169674691 . T . LowGQ END=169674691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:7,0 chr2 169674692 . C . PASS END=169674702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,252:0,27,252:9,0 chr2 169674703 . G . PASS END=169674706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 169674707 . A . PASS END=169674709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 169674710 . C . PASS END=169674710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 169674711 . T . PASS END=169674726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr2 169674727 . A . PASS END=169674727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 169674728 . A . PASS END=169674728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 169674729 . T . PASS END=169674729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 169674730 . T . PASS END=169674730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 169674731 . A . PASS END=169674750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr2 169674751 . A . PASS END=169674751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:9,0 chr2 169674752 . C . PASS END=169674752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674753 . T . PASS END=169674754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 169674755 . C . PASS END=169674758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674759 . G . PASS END=169674761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 169674762 . C . PASS END=169674763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674764 . C G, 77.10 PASS DP=10;MQ=247.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,10,0:1.000,0.000:10:0,7,0:0,3,0:27:115,30,0,379,30,379:255,33,0:0,0:7.7103e+01,2.7103e+01,8.4743e-03,3.7636e+02,6.1873e+01,3.7936e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,6:0,0,3,7 chr2 169674765 . G . PASS END=169674765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674766 . A . PASS END=169674766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:10,0 chr2 169674767 . A . PASS END=169674768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674769 . T . LowGQ END=169674769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr2 169674770 . C . PASS END=169674770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 169674771 . C . PASS END=169674775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674776 . G . PASS END=169674776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 169674777 . C . PASS END=169674780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr2 169674781 . A . PASS END=169674781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 169674782 . G . PASS END=169674782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 169674783 . C . PASS END=169674783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 169674784 . C . PASS END=169674786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674787 . T . PASS END=169674794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 169674795 . C . PASS END=169674795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 169674796 . T . PASS END=169674797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 169674798 . G . PASS END=169674801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 169674802 . T . PASS END=169674806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:14:10:0,14,270:0,14,255:6,0 chr2 169681144 . G . PASS END=169681221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:44:0,89,1189:0,89,255:40,0 chr2 169681222 . A . PASS END=169681222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1426:0,77,255:36,0 chr2 169681223 . A . PASS END=169681227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1438:0,112,255:39,0 chr2 169684668 . T . PASS END=169684730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:31:0,93,1164:0,93,255:40,0 chr2 169684930 . A . PASS END=169685011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:67:0,120,1800:0,172,255:40,0 chr2 169687982 . C . PASS END=169688044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:68:0,120,1800:0,192,255:40,0 chr2 169690737 . G . PASS END=169690766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,114,1598:0,116,255:40,0 chr2 169690767 . A . PASS END=169690835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,122,255:40,0 chr2 169699502 . C . PASS END=169699627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,3:90:99:69:0,120,1800:0,174,255:40,1 chr2 169703378 . A . PASS END=169703444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,102,1530:0,117,255:40,0 chr2 169703445 . G . PASS END=169703461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1254:0,89,255:35,0 chr2 169707346 . G . PASS END=169707390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:96:33:0,96,1440:0,99,255:40,0 chr2 169707391 . T . PASS END=169707427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,136,255:40,0 chr2 169707428 . C T, 210.69 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,28,0:0,27,0:161:248,164,0,1996,164,1996:255,170,0:0,0:2.1069e+02,1.6069e+02,0.0000e+00,4.5000e+02,1.9546e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,25:0,0,29,26 chr2 169707429 . A . PASS END=169707465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,122,255:40,0 chr2 169707466 . T . PASS END=169707514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:51:0,117,1755:0,123,255:40,0 chr2 169707515 . A . PASS END=169707516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 169707594 . A . PASS END=169707692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:62:0,120,1800:0,173,255:40,0 chr2 169707789 . T . PASS END=169707914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:58:0,120,1800:0,152,255:40,0 chr2 169711862 . G . PASS END=169711970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:60:0,120,1800:0,180,255:40,0 chr2 169712396 . A . LowGQ END=169712398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,6:38:0:35:0,0,920:0,0,255:32,0 chr2 169712399 . T . PASS END=169712400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1366:0,114,255:38,0 chr2 169712401 . A . LowGQ END=169712401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,8:38:0:38:0,0,889:85,0,255:30,0 chr2 169712402 . G . PASS END=169712402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 169712403 . G . PASS END=169712403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:33:38:0,33,1141:0,33,255:32,0 chr2 169712404 . C . LowGQ END=169712405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:0:38:0,0,908:29,0,255:33,0 chr2 169712406 . T . PASS END=169712406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 169712407 . G . LowGQ END=169712407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,7:41:0:41:0,0,1090:15,0,255:32,0 chr2 169712408 . T . PASS END=169712408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:41:0,92,1459:0,92,255:37,0 chr2 169712409 . C . PASS END=169712409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:40:41:0,40,1164:0,40,255:32,0 chr2 169712410 . A . PASS END=169712410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:20:41:0,20,1189:0,20,255:33,0 chr2 169712411 . G . LowGQ END=169712411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,7:41:0:41:0,0,1061:7,0,255:30,0 chr2 169712412 . A . PASS END=169712412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1329:0,90,255:35,0 chr2 169712413 . C . LowGQ END=169712413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,12:43:0:43:0,0,959:70,0,255:28,0 chr2 169712414 . T . PASS END=169712414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 169712415 . G . PASS END=169712415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:26:42:0,26,1169:0,26,255:32,0 chr2 169712416 . T . PASS END=169712416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 169712417 . G . LowGQ END=169712417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,8:42:0:42:0,0,986:35,0,255:30,0 chr2 169712418 . A . PASS END=169712418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 169713200 . G . PASS END=169713288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,133,255:40,0 chr2 169716022 . A . PASS END=169716147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:37:0,95,1372:0,95,255:40,0 chr2 169717305 . G . PASS END=169717419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,120,1800:0,127,255:40,1 chr2 169718470 . C . PASS END=169718559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,117,1800:0,117,255:40,0 chr2 169719887 . A . PASS END=169719950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:60:0,120,1800:0,156,255:40,0 chr2 169719951 . T G, 227.12 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,35,0:0,25,0:177:265,180,0,2289,180,2289:255,180,0:0,0:2.2712e+02,1.7712e+02,0.0000e+00,4.5000e+02,2.1189e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,36:0,0,25,35 chr2 169719952 . A . PASS END=169719960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:59:0,120,1800:0,163,255:40,0 chr2 169721344 . G . PASS END=169721376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,116,1604:0,116,255:40,0 chr2 169721377 . G A, 221.09 PASS DP=58;MQ=249.80;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,30,0:0,28,0:171:259,174,0,2180,174,2180:255,174,0:0,0:2.2109e+02,1.7109e+02,0.0000e+00,4.5000e+02,2.0586e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,29:0,0,35,23 chr2 169721378 . A . PASS END=169721414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:58:0,120,1800:0,169,255:40,0 chr2 169721415 . C . PASS END=169721480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,117,1755:0,122,255:40,0 chr2 169721896 . T . PASS END=169721906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr2 169727941 . T . PASS END=169728022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,126,255:40,0 chr2 169728023 . T . PASS END=169728041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:48:0,84,1260:0,105,255:40,0 chr2 169728042 . C . PASS END=169728049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:60:42:0,60,900:0,87,255:26,0 chr2 169728050 . G . LowGQ END=169728050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,9:42:0:42:0,0,973:23,0,255:15,0 chr2 169728051 . G . PASS END=169728052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:54:42:0,54,810:0,110,255:17,0 chr2 169728053 . G . PASS END=169728065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:12:30:0,12,180:0,74,255:6,0 chr2 169730095 . C . PASS END=169730193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:60:0,120,1800:0,164,255:40,0 chr2 169732582 . C . PASS END=169732604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1028:0,93,255:31,0 chr2 169732605 . C . PASS END=169732605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,0 chr2 169732606 . C . PASS END=169732613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 169732614 . T . PASS END=169732614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr2 169732615 . C . PASS END=169732620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1074:0,82,255:33,0 chr2 169732621 . A . PASS END=169732621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1181:0,69,255:33,0 chr2 169732622 . C . PASS END=169732622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:33,0 chr2 169732623 . A . PASS END=169732626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:34,0 chr2 169732627 . C . PASS END=169732627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr2 169732628 . T . PASS END=169732628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1302:0,89,255:34,0 chr2 169732629 . G . PASS END=169732629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr2 169732630 . C . PASS END=169732638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1333:0,81,255:37,0 chr2 169732639 . G . PASS END=169732639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:36,0 chr2 169732640 . C . PASS END=169732640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1326:0,45,255:35,0 chr2 169732641 . A . PASS END=169732653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:35:0,81,1308:0,81,255:36,0 chr2 169732654 . T . PASS END=169732654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1113:0,72,255:30,0 chr2 169732655 . C . PASS END=169732655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1302:0,89,255:31,0 chr2 169732656 . T . PASS END=169732656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:29,0 chr2 169732657 . C . PASS END=169732658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:30,0 chr2 169732659 . G . PASS END=169732659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:30,0 chr2 169732660 . C . PASS END=169732660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 169732661 . A . PASS END=169732661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:26,0 chr2 169732662 . T . PASS END=169732662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1156:0,50,255:27,0 chr2 169732663 . T . PASS END=169732663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 169732664 . C . PASS END=169732664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,80,255:25,0 chr2 169732665 . G . PASS END=169732665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1108:0,41,255:24,0 chr2 169732666 . C . PASS END=169732666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:38:33:0,38,1140:0,38,255:25,0 chr2 169732667 . T . PASS END=169732668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:72:32:0,72,1080:0,82,255:24,0 chr2 169732669 . T . PASS END=169732669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:23,0 chr2 169732670 . A . PASS END=169732683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:24,0 chr2 169732684 . T . PASS END=169732684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:19,0 chr2 169732685 . A . PASS END=169732686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 169733748 . T . PASS END=169733894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:56:0,120,1800:0,152,255:40,0 chr2 169745736 . G . PASS END=169745801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,128,255:40,0 chr2 169745897 . C . PASS END=169746029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,117,1755:0,164,255:40,0 chr2 169757842 . A . PASS END=169758041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:37:0,81,1215:0,103,255:40,0 chr2 169758042 . A . PASS END=169758042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 169758043 . A . PASS END=169758043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 169758044 . A . PASS END=169758059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:26,0 chr2 169758955 . G . PASS END=169759064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,99,1541:0,99,255:40,0 chr2 169761015 . G . PASS END=169761116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,92,255:40,0 chr2 169761117 . C . PASS END=169761126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:28:0,60,900:0,77,255:22,0 chr2 169763174 . A . PASS END=169763185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,174,255:40,0 chr2 169763186 . A . PASS END=169763289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:59:0,119,1800:0,119,255:40,0 chr2 169764078 . G . PASS END=169764138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:85:41:0,85,1450:0,85,255:40,1 chr2 169764139 . A . PASS END=169764175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,114,1748:0,114,255:40,0 chr2 169764176 . G C, 200.02 PASS DP=52;MQ=249.98;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,25,0:0,26,0:150:238,153,0,338,338,338:255,153,0:0,0:2.0002e+02,1.5002e+02,0.0000e+00,3.3479e+02,3.6956e+02,3.3780e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,40,11:0,0,28,23 chr2 169764177 . T . PASS END=169764213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,120,1800:0,123,255:40,0 chr2 169764214 . C . PASS END=169764238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,118,1800:0,118,255:40,1 chr2 169764239 . A . PASS END=169764239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:66:52:0,66,1763:0,66,255:40,1 chr2 169764240 . A . PASS END=169764353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:96:38:0,96,1440:0,98,255:40,0 chr2 169764354 . T . PASS END=169764354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:32,0 chr2 169764355 . C . PASS END=169764355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:32,0 chr2 169764356 . C . PASS END=169764356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1319:0,62,255:30,0 chr2 169764357 . T . PASS END=169764377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1185:0,80,255:31,0 chr2 169764378 . A . PASS END=169764380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1094:0,77,255:27,0 chr2 169764381 . A . PASS END=169764389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:34:0,89,1257:0,89,255:31,0 chr2 169764390 . T . PASS END=169764390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1099:0,77,255:29,0 chr2 169764391 . G . PASS END=169764589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:31:0,90,1341:0,93,255:40,0 chr2 169772115 . T . PASS END=169772192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,105,1575:0,106,255:40,0 chr2 169779462 . C . PASS END=169779462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 169779492 . C . PASS END=169779492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 169779599 . G . PASS END=169779599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 169779623 . G . PASS END=169779623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 169779726 . T . PASS END=169779726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 169779816 . C . PASS END=169779816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 169779851 . A . PASS END=169779851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 169779880 . A . PASS END=169779880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 169779939 . C . PASS END=169779939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 169780132 . T . PASS END=169780134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 169780135 . A . PASS END=169780161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,918:0,84,255:36,0 chr2 169780162 . T . PASS END=169780162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1037:0,77,255:35,0 chr2 169780163 . T . PASS END=169780285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1147:0,80,255:40,0 chr2 169780286 . A . PASS END=169780288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 169780289 . C . PASS END=169780289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 169780290 . A . PASS END=169780317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:25,0 chr2 169780318 . A . PASS END=169780328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 169780329 . C . PASS END=169780332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr2 169780342 . G . PASS END=169780342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 169781167 . C . PASS END=169781299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:33:0,82,1097:0,82,255:40,0 chr2 169781300 . T . PASS END=169781300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 169781301 . T . PASS END=169781313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:28,0 chr2 169783666 . C . PASS END=169783873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:27:0,81,950:0,81,255:40,0 chr2 169783879 . A . PASS END=169783879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 169785802 . A . PASS END=169785802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:28,0 chr2 169785803 . G . PASS END=169785826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:31:0,86,1202:0,86,255:35,0 chr2 169785827 . A . PASS END=169785827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:65:35:0,65,927:0,65,255:34,0 chr2 169785828 . C . PASS END=169785840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1173:0,88,255:35,0 chr2 169785841 . A . PASS END=169785841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1136:0,74,255:32,0 chr2 169785842 . G . PASS END=169785855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,917:0,82,255:33,0 chr2 169785856 . G . PASS END=169785856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,931:0,32,255:27,0 chr2 169785857 . A . PASS END=169785857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 169785858 . T . PASS END=169785859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,791:0,40,255:26,0 chr2 169785860 . G . PASS END=169785861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,956:0,73,255:28,0 chr2 169787165 . C . PASS END=169787166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 169787175 . C . PASS END=169787180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr2 169787181 . C . PASS END=169787214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,784:0,63,255:25,0 chr2 169787215 . T . PASS END=169787215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:23,0 chr2 169787216 . G . PASS END=169787217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 169787218 . A . PASS END=169787222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 169787223 . A . PASS END=169787225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 169787226 . G . PASS END=169787233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 169787234 . C . PASS END=169787234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 169787235 . A . PASS END=169787243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:33,0 chr2 169787244 . G . PASS END=169787244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:31,0 chr2 169787245 . C . PASS END=169787317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:33:0,85,1058:0,85,255:40,0 chr2 169787318 . G . PASS END=169787318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:33,0 chr2 169787319 . A . PASS END=169787342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1332:0,81,255:35,0 chr2 169787343 . A . PASS END=169787343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr2 169787344 . A . PASS END=169787372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1166:0,93,255:33,0 chr2 169787378 . G . PASS END=169787379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 169788885 . A . PASS END=169788885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1535:0,110,255:40,0 chr2 169788887 . C . PASS END=169788978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:42:0,102,1458:0,102,255:40,0 chr2 169788979 . A . PASS END=169789015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,168,255:40,0 chr2 169789016 . T C, 230.59 PASS DP=62;MQ=249.35;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,30,0:0,31,0:181:268,184,0,2365,184,2365:255,183,0:0,0:2.3059e+02,1.8059e+02,0.0000e+00,4.5000e+02,2.1536e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,40:0,0,30,31 chr2 169789017 . G . PASS END=169789043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,99,1468:0,109,255:40,0 chr2 169789055 . C . PASS END=169789055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 169791694 . C . PASS END=169791698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 169791699 . C . PASS END=169791699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 169791700 . A . PASS END=169791704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 169791705 . G . PASS END=169791715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:30,0 chr2 169791716 . G . PASS END=169791716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 169791717 . C . PASS END=169791735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1133:0,90,255:37,0 chr2 169791736 . T . PASS END=169791737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:36,0 chr2 169791738 . A . PASS END=169791914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:39:0,84,1260:0,85,255:40,0 chr2 169791915 . A . PASS END=169791935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:26:0,61,908:0,61,255:26,0 chr2 169792740 . C . PASS END=169792747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,869:0,66,255:23,0 chr2 169792748 . C . PASS END=169792748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 169792749 . C . PASS END=169792751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:24,0 chr2 169792752 . C . PASS END=169792768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr2 169792769 . C . PASS END=169792769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 169792770 . T . PASS END=169792789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1119:0,80,255:32,0 chr2 169792790 . A . PASS END=169792791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 169792792 . A . PASS END=169792889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1215:0,80,255:37,0 chr2 169792890 . C . PASS END=169792900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,68,255:25,0 chr2 169792901 . T . PASS END=169792901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 169792902 . A . PASS END=169792916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 169792917 . T . PASS END=169792921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 169792922 . T . PASS END=169792922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 169792923 . C . PASS END=169792943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr2 169801115 . C . PASS END=169801276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,110,1535:0,110,255:40,0 chr2 169801367 . C . PASS END=169801450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:93:52:0,93,1800:0,93,255:40,0 chr2 169801451 . T . PASS END=169801471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,123,255:40,0 chr2 169814473 . C . PASS END=169814484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 169814485 . G . PASS END=169814485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 169814486 . G . PASS END=169814508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1015:0,81,255:35,0 chr2 169814509 . G . PASS END=169814509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:33,0 chr2 169814510 . T . PASS END=169814617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:30:0,84,1260:0,90,255:40,0 chr2 169814618 . C . PASS END=169814621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 169814622 . A . PASS END=169814622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 169814623 . C . PASS END=169814627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 169814628 . A . PASS END=169814638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,68,255:25,0 chr2 169820714 . A . PASS END=169820818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,109,1762:0,109,255:40,0 chr2 169824930 . A . PASS END=169824930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 169824932 . C . PASS END=169824932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 169824935 . A . PASS END=169824935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 169824937 . C . PASS END=169825000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,117,1755:0,134,255:40,0 chr2 169825008 . A . PASS END=169825008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,111,1665:0,144,255:37,0 chr2 169825857 . T . PASS END=169825857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 169825860 . C . PASS END=169825866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 169825867 . G . PASS END=169825879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:29,0 chr2 169825880 . A . PASS END=169825880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 169825881 . G . PASS END=169825900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1033:0,87,255:31,0 chr2 169825901 . T . PASS END=169825901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:30,0 chr2 169825902 . G . PASS END=169826009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:31:0,90,1156:0,91,255:40,0 chr2 169826010 . T . PASS END=169826011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1170:0,69,255:27,0 chr2 169826012 . A . PASS END=169826026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:29,0 chr2 169826027 . T . PASS END=169826041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1031:0,71,255:26,0 chr2 169826042 . A . PASS END=169826042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:24,0 chr2 169826043 . T . PASS END=169826062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,922:0,72,255:24,0 chr2 169826555 . C . PASS END=169826555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 169826556 . T . PASS END=169826557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 169826558 . A . PASS END=169826560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:23,0 chr2 169826561 . C . PASS END=169826562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,811:0,72,255:24,0 chr2 169826563 . G . PASS END=169826563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr2 169826564 . C . PASS END=169826564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 169826565 . A . PASS END=169826566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 169826567 . T . PASS END=169826568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 169826569 . C . PASS END=169826570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:22,0 chr2 169826571 . T . PASS END=169826572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 169826573 . C . PASS END=169826573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,770:0,20,255:21,0 chr2 169826574 . A . PASS END=169826580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr2 169826581 . C . PASS END=169826581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,876:0,51,255:26,0 chr2 169826582 . T . PASS END=169826584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1039:0,71,255:27,0 chr2 169826585 . A . PASS END=169826590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 169826591 . A . PASS END=169826591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 169826592 . T . PASS END=169826596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:29:0,84,1241:0,86,255:33,0 chr2 169826597 . C . PASS END=169826597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:32,0 chr2 169826598 . A . PASS END=169826599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1225:0,86,255:37,0 chr2 169826600 . A . PASS END=169826600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1267:0,75,255:37,0 chr2 169826601 . G . PASS END=169826703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1281:0,97,255:40,0 chr2 169826704 . C . PASS END=169826704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr2 169826705 . T . PASS END=169826725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1249:0,89,255:34,0 chr2 169826834 . T . PASS END=169826839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 169826840 . C . PASS END=169826866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1275:0,98,255:40,0 chr2 169828351 . G . PASS END=169828351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 169828357 . C . PASS END=169828362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1418:0,111,255:37,0 chr2 169828363 . C . PASS END=169828557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:34:0,86,1233:0,86,255:40,0 chr2 169828558 . C . PASS END=169828560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 169828567 . A . PASS END=169828567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 169828571 . T . PASS END=169828571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 169830211 . T . PASS END=169830211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1451:0,114,255:38,0 chr2 169830225 . C . PASS END=169830290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,100,1376:0,100,255:40,0 chr2 169830291 . G . PASS END=169830327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1260:0,111,255:40,0 chr2 169830328 . A G, 151.88 PASS DP=35;MQ=249.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:102:190,105,0,1325,105,1325:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,23:0,0,16,19 chr2 169830329 . C . PASS END=169830329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 169830330 . C . PASS END=169830350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:26,0 chr2 169833087 . C . PASS END=169833088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1169:0,80,255:31,0 chr2 169833089 . T . PASS END=169833089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1086:0,63,255:29,0 chr2 169833090 . C . PASS END=169833095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1139:0,80,255:33,0 chr2 169833096 . T . PASS END=169833096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:32,0 chr2 169833097 . G . PASS END=169833135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:92:35:0,92,1313:0,92,255:40,0 chr2 169833136 . A . PASS END=169833136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1698:0,67,255:40,0 chr2 169833137 . T . PASS END=169833197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,99,1537:0,99,255:40,0 chr2 169836363 . G . PASS END=169836363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,919:0,32,255:28,0 chr2 169836374 . A . PASS END=169836374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 169836376 . C . PASS END=169836376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1199:0,66,255:35,0 chr2 169836377 . C . PASS END=169836377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 169836378 . T . PASS END=169836378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1209:0,64,255:37,0 chr2 169836379 . G . PASS END=169836380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1444:0,109,255:40,0 chr2 169836381 . C . PASS END=169836381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1396:0,76,255:38,0 chr2 169836382 . T . PASS END=169836385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,109,1468:0,109,255:40,0 chr2 169836386 . G . PASS END=169836386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1414:0,79,255:40,0 chr2 169836387 . T . PASS END=169836389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1421:0,93,255:40,0 chr2 169836390 . C . PASS END=169836390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1343:0,54,255:39,0 chr2 169836391 . A . PASS END=169836395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,110,1482:0,110,255:40,0 chr2 169836396 . T . PASS END=169836396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:40:42:0,40,1321:0,40,255:38,0 chr2 169836397 . G . PASS END=169836397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1410:0,76,255:37,0 chr2 169836398 . C . PASS END=169836399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1480:0,93,255:39,0 chr2 169836400 . G . PASS END=169836400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1396:0,76,255:37,0 chr2 169836401 . G . PASS END=169836489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:35:0,89,1260:0,89,255:40,0 chr2 169842620 . C . PASS END=169842771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:29:0,80,1033:0,80,255:40,0 chr2 169842772 . C . PASS END=169842794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,102,1529:0,102,255:40,0 chr2 169847306 . C . PASS END=169847306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 169847309 . A . PASS END=169847406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,83,255:40,0 chr2 169847407 . A . PASS END=169847408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 169847409 . C . PASS END=169847413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 169847414 . A . PASS END=169847415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 169847416 . T . PASS END=169847419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 169847420 . T . PASS END=169847420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:22,0 chr2 169847421 . A . PASS END=169847428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,70,255:24,0 chr2 169847429 . A . PASS END=169847429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:19,0 chr2 169847430 . C . PASS END=169847434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr2 169847435 . T . PASS END=169847435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr2 169850216 . C . PASS END=169850216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 169850221 . C . PASS END=169850383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:33:0,93,1357:0,95,255:40,0 chr2 169850384 . T . PASS END=169850384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:28,0 chr2 169850385 . T . PASS END=169850389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,91,255:28,0 chr2 169850390 . T . PASS END=169850392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 169851859 . T . PASS END=169851992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,111,1606:0,111,255:40,0 chr2 169853137 . C . PASS END=169853137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 169853140 . C . PASS END=169853140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 169853145 . T . PASS END=169853233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:43:0,96,1576:0,96,255:40,0 chr2 169869777 . C . PASS END=169869777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 169869782 . C . PASS END=169869788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1141:0,82,255:33,0 chr2 169869789 . G . PASS END=169869789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1135:0,72,255:32,0 chr2 169869790 . T . PASS END=169869802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1203:0,88,255:35,0 chr2 169869803 . A . PASS END=169869803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1223:0,75,255:34,0 chr2 169869804 . T . PASS END=169869807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1321:0,108,255:37,0 chr2 169869808 . C . PASS END=169869808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1186:0,61,255:34,0 chr2 169869809 . T . PASS END=169869955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:36:0,81,1304:0,81,255:40,0 chr2 169869956 . T . PASS END=169869956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:33,0 chr2 169869957 . G . PASS END=169870007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1147:0,80,255:34,0 chr2 169870008 . A . PASS END=169870008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 169870009 . A . PASS END=169870019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 169870020 . A . PASS END=169870020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 169870809 . T . PASS END=169870810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,209,255:40,0 chr2 169870812 . C . PASS END=169870864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:73:0,120,1800:0,203,255:40,0 chr2 169873287 . C . PASS END=169873309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:90:0,120,1800:0,230,255:40,0 chr2 169874458 . T . PASS END=169874635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:89:54:0,89,1800:0,89,255:40,0 chr2 169887764 . G . PASS END=169887764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:41:36:0,41,966:0,41,255:28,0 chr2 169887771 . T . PASS END=169887771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 169887785 . G . PASS END=169887785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr2 169923657 . A . PASS END=169923657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 169923658 . T . PASS END=169923660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 169923661 . C . PASS END=169923663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 169923664 . A . PASS END=169923752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1227:0,87,255:40,0 chr2 169923753 . G . PASS END=169923753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:37,0 chr2 169923754 . A . PASS END=169923772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,96,255:37,0 chr2 169923773 . C . PASS END=169923777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr2 169938033 . G . PASS END=169938037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 169938038 . C . PASS END=169938040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 169938041 . C . PASS END=169938042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 169938043 . T . PASS END=169938043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 169938044 . C . PASS END=169938051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,892:0,66,255:24,0 chr2 169938052 . A . PASS END=169938052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 169938053 . T . PASS END=169938055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 169938056 . A . PASS END=169938056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr2 169938057 . A . PASS END=169938061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 169938062 . G . PASS END=169938062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:30,0 chr2 169938063 . G . PASS END=169938404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:34:0,90,1380:0,90,255:40,0 chr2 169939839 . G . PASS END=169939858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1269:0,100,255:40,0 chr2 169939859 . A . PASS END=169939859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:43:44:0,43,1319:0,43,255:40,0 chr2 169939860 . A . PASS END=169940087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:34:0,87,1280:0,95,255:40,0 chr2 169940088 . A . PASS END=169940097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:31:0,63,945:0,93,255:26,0 chr2 169948300 . A . PASS END=169948463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:97:37:0,97,1394:0,97,255:40,0 chr2 169952054 . G . PASS END=169952057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 169952058 . A . PASS END=169952058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 169952059 . G . PASS END=169952059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 169952060 . A . PASS END=169952060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr2 169952061 . C . PASS END=169952064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,693:0,75,255:26,0 chr2 169952065 . C . PASS END=169952071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,984:0,81,255:27,0 chr2 169952072 . G . PASS END=169952072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 169952073 . C . PASS END=169952082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1079:0,93,255:31,0 chr2 169952083 . T . PASS END=169952083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 169952084 . A . PASS END=169952090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 169952091 . C . PASS END=169952091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 169952092 . A . PASS END=169952092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 169952093 . T . PASS END=169952093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 169952094 . G . PASS END=169952097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 169952098 . C . PASS END=169952098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 169952099 . T . PASS END=169952100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 169952101 . T . PASS END=169952101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 169952102 . C . PASS END=169952102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 169952103 . T . PASS END=169952103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 169952104 . C . PASS END=169952224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:32:0,90,1350:0,96,255:40,0 chr2 169952225 . A . PASS END=169952225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 169952226 . C . PASS END=169952230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 169952231 . T . PASS END=169952231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr2 169952232 . A . PASS END=169952259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1081:0,86,255:34,0 chr2 169952260 . A . PASS END=169952260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 169952261 . A . PASS END=169952261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 169952262 . T . PASS END=169952277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:25:0,60,900:0,75,255:25,0 chr2 169983787 . T . PASS END=169983787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr2 169983800 . T . PASS END=169983800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:97:0,120,1800:0,255,255:40,0 chr2 169983808 . T . PASS END=169983808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:96:0,120,1800:0,255,255:40,0 chr2 169984066 . C . PASS END=169984066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:54:58:0,54,1572:0,54,255:40,0 chr2 169984124 . C . PASS END=169984124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:82:0,120,1800:0,213,255:40,0 chr2 169984176 . A . PASS END=169984176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 169984182 . G . PASS END=169984182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 169984211 . A . PASS END=169984211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,130,255:40,0 chr2 169984262 . A AT,ATT, 111.69 PASS DP=28;MQ=250.00;FractionInformativeReads=0.964 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,2,0:0.926,0.074,0.000:27:0,8,1,0:0,17,1,0:53:126,65,0,184,46,107,197,56,170,180:255,73,0:0,34:1.1169e+02,6.1690e+01,1.9673e-05,1.8083e+02,5.4120e+01,1.0712e+02,2.1790e+02,8.8040e+01,2.0184e+02,2.0399e+02:0.00,11.00,14.00,11.00,22.00,14.00,34.77,45.77,45.77,37.77:0,0,5,22:0,0,13,14 chr2 169984349 . C . PASS END=169984349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 169984541 . A . PASS END=169984541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 169984692 . T . PASS END=169984692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 169984795 . G . PASS END=169984795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 169984863 . G . PASS END=169984863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 169985011 . C . PASS END=169985011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,169,255:40,0 chr2 169985051 . T . PASS END=169985051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 169985173 . C . PASS END=169985340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,126,255:40,0 chr2 169985521 . A . PASS END=169985521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr2 169985523 . C . PASS END=169985594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:65:0,120,1800:0,179,255:40,0 chr2 169989084 . C . PASS END=169989191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:47:0,93,1395:0,140,255:40,0 chr2 169993902 . C . PASS END=169993971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,101,1426:0,101,255:40,0 chr2 169993972 . T . PASS END=169994003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:58:0,111,1665:0,127,255:40,0 chr2 169995073 . G . PASS END=169995073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 169995087 . C . PASS END=169995087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 169995088 . A . PASS END=169995100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1094:0,83,255:34,0 chr2 169995101 . T . PASS END=169995101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:31,0 chr2 169995102 . G . PASS END=169995206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:40:0,105,1456:0,105,255:40,0 chr2 169995207 . A . PASS END=169995207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1164:0,64,255:29,0 chr2 169995208 . C . PASS END=169995216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1395:0,98,255:33,0 chr2 169995761 . C . PASS END=169995763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,952:0,87,255:29,0 chr2 169995764 . G . PASS END=169995764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 169995765 . G . PASS END=169995775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1027:0,82,255:39,0 chr2 169995776 . A . PASS END=169995776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr2 169995777 . G . PASS END=169995881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,116,1598:0,116,255:40,0 chr2 169996053 . T . PASS END=169996120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,124,255:40,0 chr2 169996965 . T . PASS END=169996976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,764:0,66,255:24,0 chr2 169996977 . A . PASS END=169996977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 169996978 . G . PASS END=169996991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 169996992 . A . PASS END=169996992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 169996993 . A . PASS END=169997008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 169997009 . G . PASS END=169997013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1092:0,74,255:25,0 chr2 169997014 . T . PASS END=169997023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 169997024 . T . PASS END=169997025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,954:0,42,255:25,1 chr2 169997026 . G . PASS END=169997050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:25,0 chr2 169997051 . G A, 116.22 PASS DP=23;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,15,0:0,8,0:66:154,69,0,884,69,884:255,69,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,15:0,0,10,13 chr2 169997052 . A . PASS END=169997055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 169999184 . C . PASS END=169999185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 169999186 . G . PASS END=169999187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 169999188 . A . PASS END=169999188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 169999189 . T . PASS END=169999293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1086:0,84,255:40,0 chr2 169999294 . A . PASS END=169999303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:26,0 chr2 169999317 . G . PASS END=169999317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 170002257 . C . PASS END=170002429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:42:0,108,1620:0,110,255:40,0 chr2 170002430 . A . PASS END=170002430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:35,0 chr2 170002431 . T . PASS END=170002433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,102,1530:0,120,255:36,0 chr2 170002439 . T . PASS END=170002439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 170002447 . G . PASS END=170002447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 170003249 . C . PASS END=170003253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1175:0,85,255:35,0 chr2 170003254 . T . PASS END=170003254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1189:0,74,255:34,0 chr2 170003255 . T . PASS END=170003394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:36:0,91,1183:0,91,255:40,0 chr2 170003395 . A . PASS END=170003431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1318:0,87,255:40,0 chr2 170003432 . T G, 154.88 PASS DP=37;MQ=250.00;FractionInformativeReads=0.973 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,16,0:0,20,0:105:193,108,0,1348,108,1348:255,108,0:0,0:1.5488e+02,1.0488e+02,0.0000e+00,4.5000e+02,1.3965e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,28:0,0,24,12 chr2 170003433 . T . PASS END=170003451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1347:0,95,255:36,0 chr2 170003452 . T . PASS END=170003452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:27,0 chr2 170003453 . C . PASS END=170003459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:35:0,81,1215:0,92,255:27,0 chr2 170003460 . G . PASS END=170003469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 170003477 . A . PASS END=170003477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 170007408 . C . PASS END=170007409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 170007410 . T . PASS END=170007410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 170007411 . A . PASS END=170007432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,894:0,75,255:26,0 chr2 170007433 . C . PASS END=170007434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 170007435 . G . PASS END=170007435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 170007436 . C . PASS END=170007441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 170007442 . G . PASS END=170007442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 170007443 . G . PASS END=170007505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,101,1380:0,101,255:40,0 chr2 170007506 . T . PASS END=170007506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1164:0,78,255:38,0 chr2 170007507 . T . PASS END=170007536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1294:0,84,255:38,0 chr2 170009309 . C . PASS END=170009463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:36:0,84,1260:0,97,255:40,0 chr2 170009464 . A . PASS END=170009474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:25,0 chr2 170009478 . C . PASS END=170009478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 170009488 . C . PASS END=170009488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 170010970 . T . PASS END=170010984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:33:0,93,1205:0,93,255:40,0 chr2 170010985 . T C, 178.03 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,19,0:0,25,0:128:216,131,0,1602,131,1602:255,132,0:0,0:1.7803e+02,1.2803e+02,0.0000e+00,4.5000e+02,1.6280e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,19:0,0,26,18 chr2 170010986 . G . PASS END=170011022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,120,1800:0,122,255:40,0 chr2 170011023 . T . PASS END=170011113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:42:0,96,1485:0,96,255:40,0 chr2 170012784 . C . PASS END=170012915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:95:50:0,95,1743:0,95,255:40,0 chr2 170013881 . C . PASS END=170013891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,132,255:40,0 chr2 170013892 . G . PASS END=170013936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,107,1598:0,107,255:40,0 chr2 170013937 . A . LowGQ END=170013937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,12:56:0:56:0,0,1218:54,0,255:40,0 chr2 170013938 . T . PASS END=170013938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr2 170013939 . A . LowGQ END=170013941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,15:56:0:56:0,0,941:147,0,255:37,0 chr2 170013942 . T . PASS END=170013942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,151,255:40,0 chr2 170013943 . C G, 0.00 DRAGENSnpHardQUAL DP=58;MQ=248.94;MQRankSum=3.899;ReadPosRankSum=2.330;FractionInformativeReads=0.914;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:43,10,0:0.189,0.000:53:18,3,0:25,7,0:30:5,0,50,155,1301,1631:121,0,255:40,0:4.5912e-03,2.9761e+01,8.2761e+01,1.8465e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,36,10,0:20,23,3,7 chr2 170013944 . C . LowGQ END=170013944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,12:56:0:56:0,0,1174:124,0,255:39,0 chr2 170013945 . T . PASS END=170013989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,120,1800:0,127,255:40,0 chr2 170013990 . A . PASS END=170014012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:36:0,102,1319:0,108,255:37,0 chr2 170018982 . T . PASS END=170019093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:37:0,87,1305:0,95,255:40,0 chr2 170019094 . A . PASS END=170019094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1188:0,61,255:27,0 chr2 170019095 . G . PASS END=170019098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:28,0 chr2 170019099 . T . PASS END=170019102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1054:0,74,255:26,0 chr2 170019103 . T . PASS END=170019106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 170019107 . C . PASS END=170019110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 170022442 . A . PASS END=170022564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:35:0,105,1290:0,105,255:40,0 chr2 170025049 . A . PASS END=170025082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:40:0,104,1480:0,104,255:40,0 chr2 170025083 . A G, 203.04 PASS DP=52;MQ=249.85;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,26,0:0,26,0:153:241,156,0,1987,156,1987:255,156,0:0,0:2.0304e+02,1.5304e+02,0.0000e+00,4.5000e+02,1.8781e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,25:0,0,27,25 chr2 170025084 . C . PASS END=170025120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,152,255:40,0 chr2 170025121 . T . PASS END=170025176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:36:0,95,1341:0,95,255:40,0 chr2 170025177 . A . PASS END=170025186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,91,255:26,0 chr2 170025199 . A . PASS END=170025199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 170025201 . A . PASS END=170025201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 170026212 . G . PASS END=170026328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,105,1575:0,130,255:40,0 chr2 170027061 . C . PASS END=170027152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:30:0,84,1088:0,84,255:40,0 chr2 170027153 . T . PASS END=170027153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:65:53:0,65,1752:0,65,255:40,0 chr2 170027154 . C . PASS END=170027177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:48:0,92,1682:0,92,255:40,0 chr2 170027191 . G . PASS END=170027191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 170028525 . C . PASS END=170028644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:36:0,99,1476:0,101,255:40,0 chr2 170029606 . C . PASS END=170029628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:26,0 chr2 170029629 . T . PASS END=170029725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1047:0,84,255:40,0 chr2 170029726 . C . PASS END=170029734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr2 170030429 . T . PASS END=170030436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr2 170030437 . T . PASS END=170030466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,474:0,42,255:19,0 chr2 170030467 . T . PASS END=170030485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:26,0 chr2 170030486 . T . PASS END=170030487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 170030488 . C . PASS END=170030494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:26,0 chr2 170030495 . G . PASS END=170030534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1039:0,81,255:36,0 chr2 170030535 . C . PASS END=170030535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1290:0,72,255:33,0 chr2 170030536 . C . PASS END=170030546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:36,0 chr2 170030547 . G . PASS END=170030547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr2 170030548 . C . PASS END=170030562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,101,1418:0,101,255:38,0 chr2 170030563 . C . PASS END=170030563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:38,0 chr2 170030564 . T . PASS END=170030647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:85:35:0,85,1349:0,85,255:40,0 chr2 170030648 . A . PASS END=170030658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,79,255:25,0 chr2 170030659 . T . PASS END=170030659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:23,0 chr2 170030660 . C . PASS END=170030664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,67,255:23,0 chr2 170030665 . T . PASS END=170030673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,55,255:19,0 chr2 170030674 . T . PASS END=170030674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 170030683 . A . PASS END=170030683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 170031703 . C . PASS END=170031706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 170031707 . A . PASS END=170031708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,621:0,43,255:19,0 chr2 170031709 . G . PASS END=170031714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr2 170031715 . G . PASS END=170031716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,751:0,47,255:22,0 chr2 170031717 . T . PASS END=170031722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:25,0 chr2 170031723 . T . PASS END=170031723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr2 170031724 . C . PASS END=170031737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr2 170031738 . C . PASS END=170031740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 170031741 . T . PASS END=170031741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 170031742 . T . PASS END=170031742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 170031743 . T . PASS END=170031743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 170031744 . T . PASS END=170031752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:31,0 chr2 170031753 . T . PASS END=170031753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 170031754 . T . PASS END=170031879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:31:0,85,1119:0,85,255:38,0 chr2 170031880 . T . PASS END=170031880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 170031881 . C . PASS END=170031888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 170031889 . T . PASS END=170031899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:26,0 chr2 170032921 . T . PASS END=170032928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1170:0,83,255:31,0 chr2 170032929 . G . PASS END=170032929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr2 170032930 . T . PASS END=170032932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:29,0 chr2 170032933 . G . PASS END=170032935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr2 170032936 . C . PASS END=170032937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:33,0 chr2 170032938 . C . PASS END=170032938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:34,0 chr2 170032939 . A . PASS END=170032939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1324:0,92,255:34,0 chr2 170032940 . G . PASS END=170032941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:37,0 chr2 170032942 . A . PASS END=170032945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1352:0,100,255:38,0 chr2 170032946 . G . PASS END=170032947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:38,0 chr2 170032948 . G . PASS END=170033098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:35:0,81,1215:0,81,255:40,0 chr2 170034313 . C . PASS END=170034314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1290:0,105,255:35,0 chr2 170034315 . A . PASS END=170034315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1091:0,74,255:34,0 chr2 170034316 . T . PASS END=170034501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:35:0,84,1260:0,92,255:40,0 chr2 170034502 . C . PASS END=170034517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,64,255:25,0 chr2 170034518 . G . PASS END=170034533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,698:0,46,255:19,0 chr2 170034534 . T . PASS END=170034534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 170034535 . A . PASS END=170034536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 170034539 . G . PASS END=170034539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 170037958 . T . PASS END=170037958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:25,0 chr2 170037959 . C . PASS END=170038122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:28:0,81,987:0,84,255:40,0 chr2 170038123 . A . PASS END=170038128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:26,0 chr2 170038134 . A . PASS END=170038134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 170038677 . C . PASS END=170038680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:28,0 chr2 170038681 . A . PASS END=170038805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1080:0,87,255:39,0 chr2 170038806 . C . PASS END=170038818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,78,255:26,0 chr2 170038819 . A . PASS END=170038829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,58,255:19,0 chr2 170042008 . C . PASS END=170042008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 170042013 . C . PASS END=170042013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1074:0,65,255:30,0 chr2 170042014 . T . PASS END=170042016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 170042017 . A . PASS END=170042018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 170042019 . A . PASS END=170042529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:93:31:0,93,1097:0,93,255:40,0 chr2 170044480 . C . PASS END=170044529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,1044:0,80,255:40,0 chr2 170044530 . A . PASS END=170044530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:68:47:0,68,1351:0,68,255:40,0 chr2 170044531 . G . PASS END=170044539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,111,1607:0,111,255:40,0 chr2 170044540 . T . PASS END=170044540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1444:0,77,255:40,0 chr2 170044541 . C . PASS END=170044774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:36:0,81,1215:0,94,255:40,1 chr2 170044775 . C . PASS END=170044775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr2 170048336 . A . PASS END=170048336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 170048342 . C . PASS END=170048350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:29,0 chr2 170048351 . T . PASS END=170048351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 170048352 . T . PASS END=170048352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 170048353 . T . PASS END=170048353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 170048354 . G . PASS END=170048488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:35:0,92,1272:0,92,255:40,0 chr2 170048489 . T . PASS END=170048489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr2 170048490 . C . PASS END=170048498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:32:0,80,1115:0,80,255:32,0 chr2 170048499 . T . PASS END=170048520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:25:0,61,848:0,61,255:26,0 chr2 170048521 . G . PASS END=170048521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:21,0 chr2 170048522 . G . PASS END=170048522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 170048523 . A . PASS END=170048523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr2 170048524 . A . PASS END=170048526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:24,0 chr2 170048527 . C . PASS END=170048527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 170048528 . G . PASS END=170048534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 170048535 . T . PASS END=170048535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr2 170048536 . T . PASS END=170048543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 170050271 . G . PASS END=170050402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:36:0,81,1215:0,94,255:40,0 chr2 170053421 . C . PASS END=170053527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:32:0,81,1215:0,88,255:40,0 chr2 170053528 . C . PASS END=170053540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:25,0 chr2 170053550 . G . PASS END=170053550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 170055296 . T . PASS END=170055297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:61:33:0,61,1178:0,61,255:34,0 chr2 170055298 . C . PASS END=170055299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1335:0,105,255:35,0 chr2 170055300 . A . PASS END=170055300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr2 170055301 . T . PASS END=170055312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,105,1575:0,108,255:40,0 chr2 170055313 . T . PASS END=170055313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1471:0,57,255:40,0 chr2 170055314 . C . PASS END=170055421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,105,1575:0,116,255:40,0 chr2 170058124 . T . PASS END=170058124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 170058137 . C . PASS END=170058149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:25,0 chr2 170058150 . C . PASS END=170058155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr2 170058156 . A . PASS END=170058156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr2 170058157 . A . PASS END=170058345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:28:0,81,1025:0,82,255:40,0 chr2 170058346 . A . PASS END=170058367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:23:0,66,990:0,69,255:24,0 chr2 170058368 . C . PASS END=170058377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:18,0 chr2 170058378 . G . PASS END=170058380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr2 170059266 . C . PASS END=170059469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:38:0,102,1419:0,102,255:40,0 chr2 170060492 . C . PASS END=170060496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr2 170060497 . G . PASS END=170060498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 170060499 . A . PASS END=170060499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 170060500 . C . PASS END=170060500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 170060501 . A . PASS END=170060501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 170060502 . G . PASS END=170060519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,748:0,66,255:26,0 chr2 170060520 . A . PASS END=170060521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 170060522 . T . PASS END=170060527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,901:0,64,255:26,0 chr2 170060528 . G . PASS END=170060528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 170060529 . T . PASS END=170060529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:26,0 chr2 170060530 . T . PASS END=170060535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr2 170060536 . G . PASS END=170060536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 170060537 . G . PASS END=170060537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 170060538 . A . PASS END=170060538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:28,0 chr2 170060539 . T . PASS END=170060539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1196:0,85,255:31,0 chr2 170060540 . T . PASS END=170060540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1123:0,69,255:30,0 chr2 170060541 . G . PASS END=170060601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:89:34:0,89,1274:0,89,255:40,0 chr2 170060602 . T . PASS END=170060602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:76:47:0,76,1343:0,76,255:40,0 chr2 170060603 . T . PASS END=170060755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,94,255:40,0 chr2 170060756 . T . PASS END=170060769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:29:0,60,900:0,63,255:25,0 chr2 170060770 . T . PASS END=170060770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 170060771 . C . PASS END=170060777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:20,0 chr2 170060778 . C . PASS END=170060780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 170060781 . C . PASS END=170060781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:17,0 chr2 170061986 . T . PASS END=170061986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 170061989 . A . PASS END=170061989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 170061990 . G . PASS END=170061994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 170061995 . G . PASS END=170061995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:26,0 chr2 170061996 . C . PASS END=170061997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr2 170061998 . T . PASS END=170061999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 170062000 . C . PASS END=170062009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:30:0,86,1125:0,86,255:36,0 chr2 170062010 . A . PASS END=170062010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:35,0 chr2 170062011 . G . PASS END=170062136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:34:0,81,1112:0,102,255:40,0 chr2 170062137 . A . PASS END=170062143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:30:0,63,945:0,90,255:24,0 chr2 170062144 . G . PASS END=170062147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:27:0,57,855:0,65,255:19,0 chr2 170062533 . C . PASS END=170062534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 170062535 . T . PASS END=170062535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:27,0 chr2 170062536 . T . PASS END=170062536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:30,0 chr2 170062537 . G . PASS END=170062546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:91:32:0,91,1183:0,91,255:35,0 chr2 170062547 . T . PASS END=170062547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1239:0,56,255:34,0 chr2 170062548 . A . PASS END=170062698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:94:37:0,94,1205:0,94,255:40,0 chr2 170062831 . T . PASS END=170062831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 170062840 . C . PASS END=170063745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:83:35:0,83,1226:0,83,255:40,2 chr2 170063746 . T . PASS END=170063747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr2 170063748 . A . PASS END=170063748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:33,0 chr2 170063749 . A . PASS END=170063760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1266:0,91,255:33,0 chr2 170065963 . C . PASS END=170065967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 170065968 . A . PASS END=170065977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 170065978 . C . PASS END=170065978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr2 170065979 . T . PASS END=170066147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:31:0,81,1215:0,84,255:40,2 chr2 170066148 . C . PASS END=170066151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 170068478 . C . PASS END=170068711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:30:0,81,1119:0,82,255:40,0 chr2 170068712 . C . PASS END=170068717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,74,255:26,0 chr2 170070164 . T . PASS END=170070164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 170070167 . T . PASS END=170070351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:35:0,84,1260:0,84,255:40,0 chr2 170070352 . T . PASS END=170070371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:24:0,69,886:0,72,255:26,0 chr2 170070372 . T . PASS END=170070372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,799:0,41,255:22,0 chr2 170070373 . C . PASS END=170070376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 170070377 . C . PASS END=170070380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 170070387 . G . PASS END=170070387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 170072763 . C . PASS END=170072930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:80:28:0,80,1039:0,80,255:40,0 chr2 170072931 . G . PASS END=170072940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:30:0,66,990:0,83,255:26,0 chr2 170076957 . T . PASS END=170076957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 170076964 . C . PASS END=170077064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:35:0,96,1319:0,96,255:40,0 chr2 170077065 . T . PASS END=170077065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1225:0,56,255:33,0 chr2 170077066 . G . PASS END=170077073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1189:0,91,255:33,0 chr2 170081820 . C . PASS END=170081956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:37:0,90,1350:0,111,255:40,0 chr2 170081957 . T . PASS END=170081957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:30,0 chr2 170081958 . T . PASS END=170081963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,95,255:33,0 chr2 170082932 . T . PASS END=170082943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1003:0,84,255:31,0 chr2 170082944 . C . PASS END=170082944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 170082945 . C . PASS END=170083098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:92:34:0,92,1226:0,92,255:40,0 chr2 170088224 . C . PASS END=170088352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,108,1665:0,108,255:40,2 chr2 170088357 . A . PASS END=170088357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr2 170089921 . A . PASS END=170089921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 170089922 . A . PASS END=170089922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:34,0 chr2 170089923 . T . PASS END=170089942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1258:0,90,255:38,0 chr2 170089943 . A . PASS END=170089943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1243:0,65,255:38,0 chr2 170089944 . A . PASS END=170090056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:38:0,91,1410:0,91,255:40,0 chr2 170090057 . A . PASS END=170090057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:33,0 chr2 170090058 . G . PASS END=170090086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1059:0,85,255:34,0 chr2 170090087 . G . PASS END=170090098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 170092350 . C . PASS END=170092352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:24,0 chr2 170092353 . A . PASS END=170092353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 170092354 . T . PASS END=170092357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 170092358 . T . PASS END=170092359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 170092360 . G . PASS END=170092390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:30:0,86,1117:0,86,255:40,0 chr2 170092391 . A . PASS END=170092391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1501:0,63,255:39,0 chr2 170092392 . A . PASS END=170092394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 170092395 . A G, 183.11 PASS DP=46;MQ=249.96;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,21,0:0,25,0:133:221,136,0,321,321,321:255,138,0:0,0:1.8311e+02,1.3311e+02,0.0000e+00,3.1788e+02,3.5265e+02,3.2089e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,28,18:0,0,21,25 chr2 170092396 . C . PASS END=170092432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:44:0,120,1800:0,128,255:40,0 chr2 170092433 . A . PASS END=170092528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:36:0,84,1319:0,84,255:40,0 chr2 170092529 . G . PASS END=170092529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1294:0,64,255:34,0 chr2 170092530 . C . PASS END=170092538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1340:0,92,255:35,0 chr2 170092539 . A . PASS END=170092539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:30,0 chr2 170092540 . G . PASS END=170092545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1241:0,86,255:31,0 chr2 170092546 . T . PASS END=170092546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:27,0 chr2 170092547 . G . PASS END=170092548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 170092549 . C . PASS END=170092553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,86,255:26,0 chr2 170092554 . G . PASS END=170092554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1080:0,57,255:23,0 chr2 170092555 . T . PASS END=170092555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,945:0,80,255:20,0 chr2 170092556 . C . PASS END=170092556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:20,0 chr2 170092557 . A . PASS END=170092560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,71,255:22,0 chr2 170092561 . C . PASS END=170092563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 170092564 . A . PASS END=170092564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 170092565 . A . PASS END=170092571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:24:0,44,853:0,44,255:19,0 chr2 170092572 . A . PASS END=170092572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:18,0 chr2 170092573 . T . PASS END=170092578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:20:0,44,704:0,44,255:19,0 chr2 170093598 . A . PASS END=170093598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 170093605 . A . PASS END=170093605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 170093613 . T . PASS END=170093797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:41:0,106,1543:0,106,255:40,0 chr2 170094601 . C . PASS END=170094808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:42:0,81,1260:0,81,255:40,0 chr2 170094809 . G . PASS END=170094809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1394:0,76,255:25,0 chr2 170094810 . A . PASS END=170094812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:34:0,84,1260:0,85,255:28,0 chr2 170094814 . T . PASS END=170094814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 170096037 . C . PASS END=170096050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:19,0 chr2 170096051 . G . PASS END=170096055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 170096056 . C . PASS END=170096064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:24,0 chr2 170096065 . T . PASS END=170096065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 170096066 . T . PASS END=170096070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,969:0,75,255:26,0 chr2 170096071 . C . PASS END=170096078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1278:0,102,255:34,0 chr2 170096079 . C . PASS END=170096079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:33,0 chr2 170096080 . T . PASS END=170096236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:31:0,84,1247:0,86,255:40,0 chr2 170096237 . A . PASS END=170096237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:27,0 chr2 170096238 . C . PASS END=170096239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 170096240 . C . PASS END=170096246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:30:0,60,900:0,90,255:23,0 chr2 170096247 . G . PASS END=170096266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,657:0,41,255:19,0 chr2 170096267 . T . PASS END=170096267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 170096268 . C . PASS END=170096274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr2 170096275 . G . LowGQ END=170096275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,566:12,0,255:14,0 chr2 170096276 . C . PASS END=170096285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr2 170097454 . T . PASS END=170097857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:35:0,81,1215:0,85,255:40,0 chr2 170097858 . T . PASS END=170097875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,1080:0,78,255:26,0 chr2 170097887 . A . PASS END=170097887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:25,0 chr2 170099456 . T . PASS END=170099456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 170099466 . G . PASS END=170099472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 170099473 . T C, 175.96 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,17,0:0,26,0:126:214,129,0,1638,129,1638:255,129,0:0,0:1.7596e+02,1.2596e+02,0.0000e+00,4.5000e+02,1.6073e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,24:0,0,19,24 chr2 170099474 . G . PASS END=170099510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,120,1800:0,129,255:40,0 chr2 170099511 . C . PASS END=170099582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:35:0,84,1260:0,105,255:40,0 chr2 170099591 . G . PASS END=170099591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 170099913 . C . PASS END=170099923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,145,255:40,0 chr2 170099924 . T . PASS END=170099924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:37:54:0,37,1769:0,37,255:40,0 chr2 170099925 . C . PASS END=170099939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,136,255:40,0 chr2 170099940 . C . PASS END=170100032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:42:0,99,1485:0,123,255:40,0 chr2 170101203 . T . PASS END=170101226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,801:0,61,255:26,0 chr2 170101227 . C . PASS END=170101261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1011:0,81,255:37,0 chr2 170101262 . T . PASS END=170101262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1115:0,77,255:33,0 chr2 170101263 . T . PASS END=170101296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1319:0,87,255:39,0 chr2 170101297 . G . PASS END=170101300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1260:0,72,255:34,0 chr2 170101301 . T . PASS END=170101301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1302:0,59,255:33,0 chr2 170101302 . C . PASS END=170101383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1045:0,83,255:37,0 chr2 170101384 . G . PASS END=170101384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:25,0 chr2 170101385 . T . PASS END=170101394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:28,0 chr2 170101395 . T . PASS END=170101395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:28,0 chr2 170101396 . G . PASS END=170101399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 170101400 . T . PASS END=170101400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 170101401 . C . PASS END=170101404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 170101405 . A . PASS END=170101433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:25,0 chr2 170101434 . A . PASS END=170101434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:16,0 chr2 170101435 . G . PASS END=170101435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,686:0,35,255:17,0 chr2 170101436 . G . PASS END=170101437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:22:0,45,675:0,49,255:17,0 chr2 170101438 . A . PASS END=170101438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,612:0,16,255:13,0 chr2 170101439 . T . PASS END=170101439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,47,255:14,0 chr2 170101440 . T . PASS END=170101440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,676:0,32,255:14,0 chr2 170101441 . A . PASS END=170101442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 170103215 . T . PASS END=170103216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 170103217 . A . PASS END=170103217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,811:0,47,255:25,0 chr2 170103218 . G . PASS END=170103218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 170103219 . T . PASS END=170103219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:25,0 chr2 170103220 . G . PASS END=170103220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 170103221 . T . PASS END=170103223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,945:0,65,255:27,0 chr2 170103224 . C . PASS END=170103225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1025:0,84,255:29,0 chr2 170103226 . C . PASS END=170103226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:28,0 chr2 170103227 . A . PASS END=170103228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 170103229 . A . PASS END=170103229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,0 chr2 170103230 . G . PASS END=170103242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1113:0,82,255:35,0 chr2 170103243 . G . PASS END=170103243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1186:0,50,255:33,0 chr2 170103244 . T . PASS END=170103252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:35:0,88,1183:0,88,255:37,0 chr2 170103253 . C . PASS END=170103253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1180:0,64,255:35,0 chr2 170103254 . A . PASS END=170103255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,114,1457:0,114,255:40,0 chr2 170103256 . T . PASS END=170103256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1256:0,73,255:38,0 chr2 170103257 . C . PASS END=170103298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,106,1349:0,106,255:40,0 chr2 170103299 . C . PASS END=170103335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,146,255:40,0 chr2 170103336 . T C, 220.17 PASS DP=58;MQ=248.35;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,27,0:0,31,0:170:258,173,0,2153,173,2153:255,174,0:0,0:2.2017e+02,1.7017e+02,0.0000e+00,4.5000e+02,2.0494e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,32:0,0,23,35 chr2 170103337 . G . PASS END=170103350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:57:0,120,1800:0,141,255:40,0 chr2 170103351 . G T, 220.63 PASS DP=58;MQ=249.44;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,27,0:0,31,0:171:258,174,0,358,358,358:255,174,0:0,0:2.2063e+02,1.7063e+02,0.0000e+00,3.5540e+02,3.9017e+02,3.5841e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,25,33:0,0,28,30 chr2 170103352 . G . PASS END=170103388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,138,255:40,0 chr2 170103389 . G . PASS END=170103457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:41:0,94,1474:0,94,255:40,0 chr2 170103458 . C . PASS END=170103459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr2 170103460 . C . PASS END=170103466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:41:0,81,1215:0,123,255:28,0 chr2 170103467 . G . PASS END=170103482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,68,255:25,0 chr2 170103483 . A . PASS END=170103496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:18:0,43,629:0,43,255:19,0 chr2 170103877 . A . PASS END=170103877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:83:46:0,83,1493:0,83,255:40,0 chr2 170103888 . C . PASS END=170104025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,114,1710:0,114,255:40,0 chr2 170112616 . C . PASS END=170112747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:35:0,102,1530:0,105,255:40,0 chr2 170113633 . C . PASS END=170113759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:83:31:0,83,1166:0,83,255:40,0 chr2 170115535 . C . PASS END=170115550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1371:0,101,255:40,0 chr2 170115551 . C . PASS END=170115587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:45:0,120,1800:0,134,255:40,0 chr2 170115588 . T C, 226.66 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,27,0:0,33,0:177:264,180,0,2260,180,2260:255,180,0:0,0:2.2666e+02,1.7666e+02,0.0000e+00,4.5000e+02,2.1143e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,27:0,0,32,28 chr2 170115589 . G . PASS END=170115625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,164,255:40,0 chr2 170115626 . T . PASS END=170115728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:51:0,93,1800:0,93,255:40,0 chr2 170127405 . C . PASS END=170127405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 170127414 . C . PASS END=170127617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:49:0,114,1710:0,129,255:40,0 chr2 170128180 . C . PASS END=170128183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 170128184 . G . PASS END=170128210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:99:67:0,120,1800:0,163,255:40,0 chr2 170129437 . C . PASS END=170129490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:33:0,96,1399:0,99,255:40,0 chr2 170129491 . G . PASS END=170129527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,138,255:40,0 chr2 170129528 . G A, 207.19 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,28,0:0,26,0:157:245,160,0,345,345,345:255,161,0:0,0:2.0719e+02,1.5719e+02,0.0000e+00,3.4196e+02,3.7673e+02,3.4497e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,35:0,0,25,29 chr2 170129529 . A . PASS END=170129552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:40:0,84,1260:0,104,255:40,0 chr2 170129553 . T . PASS END=170129553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1264:0,70,255:25,0 chr2 170129554 . T . PASS END=170129556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:39:0,81,1215:0,117,255:28,0 chr2 170129557 . T . PASS END=170129557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1217:0,56,255:25,0 chr2 170129558 . A . PASS END=170129559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:35:0,64,1217:0,64,255:26,0 chr2 170129560 . C . PASS END=170129565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,82,255:28,0 chr2 170129566 . A . PASS END=170129577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:28,0 chr2 170131546 . C . PASS END=170131547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 170131548 . T . PASS END=170131548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 170131549 . A . PASS END=170131564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,847:0,69,255:26,0 chr2 170131565 . A . PASS END=170131571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 170131572 . A . PASS END=170131572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,723:0,69,255:27,0 chr2 170131573 . C . PASS END=170131683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:28:0,84,1055:0,84,255:40,0 chr2 170131684 . G . PASS END=170131722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,102,1530:0,110,255:40,0 chr2 170131723 . G . PASS END=170131723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:6:40:0,6,1019:0,6,255:28,0 chr2 170131724 . G . PASS END=170131724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1028:0,37,255:28,0 chr2 170131725 . G . PASS END=170131725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:3:39:0,3,911:0,3,255:27,0 chr2 170131726 . A . PASS END=170131726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr2 170131727 . G . LowGQ END=170131727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,10:40:0:40:0,0,672:97,0,255:22,0 chr2 170131728 . C . PASS END=170131748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1305:0,81,255:35,0 chr2 170134255 . C . PASS END=170134276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:30,0 chr2 170134277 . C . PASS END=170134278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 170134279 . G . PASS END=170134403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:34:0,87,1305:0,92,255:40,0 chr2 170134404 . T . PASS END=170134404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr2 170134405 . G . PASS END=170134411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr2 170134412 . C . PASS END=170134423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:26:0,63,945:0,78,255:26,0 chr2 170134424 . C . PASS END=170134448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:16:0,42,630:0,48,255:19,0 chr2 170134449 . G . PASS END=170134461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr2 170135882 . C . PASS END=170135882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 170135883 . C . PASS END=170135885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 170135886 . C . PASS END=170135886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 170135887 . A . PASS END=170135889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1350:0,93,255:36,0 chr2 170135890 . T . PASS END=170135890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr2 170135891 . G . PASS END=170136073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:33:0,83,1194:0,83,255:40,0 chr2 170136074 . A . PASS END=170136098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,800:0,66,255:24,0 chr2 170136099 . A . PASS END=170136099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 170136100 . A . PASS END=170136105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 170136858 . A . PASS END=170136858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 170136860 . C . PASS END=170136865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:35,0 chr2 170136866 . T . PASS END=170136866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 170136867 . T . PASS END=170137029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:91:38:0,91,1432:0,91,255:40,0 chr2 170139383 . A . PASS END=170139383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 170139384 . G . PASS END=170139394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 170139395 . C . PASS END=170139395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 170139396 . T . PASS END=170139397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:16:0,45,675:0,48,255:20,0 chr2 170139398 . T . PASS END=170139413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr2 170139414 . C . PASS END=170139511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1218:0,81,255:40,0 chr2 170145536 . C . PASS END=170145623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:39:0,94,1474:0,94,255:40,0 chr2 170145624 . C . PASS END=170145646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,102,255:40,0 chr2 170145647 . G . PASS END=170145655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:24,0 chr2 170145661 . C T, 119.23 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,17,0:0,7,0:69:157,72,0,930,72,930:255,72,0:0,0:1.1923e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,12:0,0,15,9 chr2 170147355 . T . PASS END=170147477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,99,1485:0,116,255:40,2 chr2 170147478 . A . PASS END=170147478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1288:0,62,255:33,0 chr2 170147479 . A . PASS END=170147490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:38:0,90,1350:0,101,255:34,0 chr2 170147491 . A . PASS END=170147507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:29:0,60,900:0,87,255:26,0 chr2 170147509 . T . PASS END=170147509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 170147518 . A . PASS END=170147519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 170148763 . C . PASS END=170148879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,110,1800:0,110,255:40,0 chr2 170150658 . T . PASS END=170150771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:37:0,89,1437:0,89,255:40,0 chr2 170151110 . T . PASS END=170151178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:59:0,120,1800:0,136,255:40,0 chr2 170151179 . A . PASS END=170151205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:63:0,102,1530:0,133,255:40,0 chr2 170151206 . C . PASS END=170151210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:66:59:0,66,990:0,122,255:26,0 chr2 170151211 . G . PASS END=170151213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:42:55:0,42,630:0,130,255:16,0 chr2 170151214 . G . PASS END=170151217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:33:49:0,33,495:0,110,255:13,0 chr2 170151218 . A . PASS END=170151219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:21:49:0,21,315:0,80,255:8,0 chr2 170151220 . T . PASS END=170151220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:18:46:0,18,270:0,121,255:5,0 chr2 170151225 . T . PASS END=170151225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:12:39:0,12,180:0,23,255:4,2 chr2 170151227 . TAAA TAA,TA,T, 89.84 PASS DP=33;MQ=249.39;MQRankSum=2.096;ReadPosRankSum=-0.758;FractionInformativeReads=0.848;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 2/3:2,6,10,10,0:0.214,0.357,0.357,0.000:28:1,5,5,5,0:1,1,5,5,0:4:91,97,60,39,11,1,48,11,0,38,83,44,16,30,48:255,0,255:5,33:8.9845e+01,9.7395e+01,6.3792e+01,3.9845e+01,1.3537e+01,4.5758e+00,4.8374e+01,1.3912e+01,2.4702e+00,4.1249e+01,1.1586e+02,7.9704e+01,5.0943e+01,6.4931e+01,8.4345e+01:0.00,2.00,5.00,2.00,4.00,5.00,2.00,4.00,4.00,5.00,34.77,36.77,36.77,36.77,37.77:0,2,10,16:1,1,11,15 chr2 170151228 . A . LowGQ END=170151228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:9,39:48:0:48:0,0,0:255,0,183:1,33 chr2 170163791 . G . PASS END=170163907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:42:0,90,1350:0,126,255:40,0 chr2 170175272 . A . PASS END=170175394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:33:0,99,1249:0,99,255:40,0 chr2 170175396 . T . PASS END=170175396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 170177287 . C . PASS END=170177394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:45:0,105,1575:0,119,255:40,0 chr2 170218831 . C . PASS END=170218837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr2 170218838 . A . PASS END=170218838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 170218839 . C . PASS END=170218846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr2 170218847 . C G, 122.24 PASS DP=25;MQ=249.80;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,11,0:0,14,0:72:160,75,0,951,75,951:255,75,0:0,0:1.2224e+02,7.2237e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,9:0,0,14,11 chr2 170218848 . G . PASS END=170218850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 170218851 . A . PASS END=170218851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 170218852 . G . PASS END=170218860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 170218861 . C . PASS END=170218861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 170218862 . G . PASS END=170218866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:25,0 chr2 170218867 . C . PASS END=170218867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 170218868 . C . PASS END=170218868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 170218869 . A . PASS END=170218869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 170218870 . G . PASS END=170218876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 170218877 . C . PASS END=170218877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 170218878 . G . PASS END=170218883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,908:0,61,255:23,0 chr2 170218884 . G . PASS END=170218884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:22,0 chr2 170218885 . C . PASS END=170218890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 170218891 . C . PASS END=170218891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,823:0,36,255:22,0 chr2 170218892 . T . PASS END=170218907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,795:0,69,255:23,0 chr2 170218908 . A . PASS END=170218908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 170218909 . T . PASS END=170218909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:21:23:0,21,623:0,21,255:17,0 chr2 170219087 . C . PASS END=170219087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 170336064 . A . PASS END=170336111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1248:0,92,255:38,0 chr2 170336112 . C . PASS END=170336113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,1000:0,68,255:27,0 chr2 170336114 . G . PASS END=170336114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 170336115 . T . PASS END=170336122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 170338761 . G . PASS END=170338843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:55:0,120,1800:0,132,255:40,0 chr2 170343578 . G . PASS END=170343644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:63:0,120,1800:0,167,255:40,0 chr2 170343649 . G . PASS END=170343649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 170344314 . A . PASS END=170344314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:81:0,120,1800:0,227,255:40,0 chr2 170344316 . C . PASS END=170344365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:78:0,120,1800:0,227,255:40,0 chr2 170344367 . T . PASS END=170344367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,218,255:40,0 chr2 170344497 . A . PASS END=170344625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:51:0,120,1800:0,132,255:40,0 chr2 170349384 . A . PASS END=170349519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,181,255:40,0 chr2 170349522 . A . PASS END=170349522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 170350251 . G . PASS END=170350346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:47:0,120,1800:0,129,255:40,0 chr2 170354136 . G . PASS END=170354199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:64:0,120,1800:0,179,255:40,0 chr2 170355996 . A . PASS END=170356130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:98:37:0,98,1620:0,98,255:40,0 chr2 170359595 . T . PASS END=170359595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 170359604 . G . PASS END=170359688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,105,1575:0,121,255:40,0 chr2 170360813 . G . PASS END=170360836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:94:0,120,1800:0,255,255:40,0 chr2 170360991 . C . PASS END=170361092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,120,1800:0,139,255:40,0 chr2 170366289 . A . PASS END=170366307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1074:0,80,255:34,0 chr2 170366308 . T . PASS END=170366308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr2 170366309 . T . PASS END=170366314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1227:0,102,255:34,0 chr2 170366315 . G . PASS END=170366315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:33,0 chr2 170366316 . G . PASS END=170366752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:83:34:0,83,1250:0,83,255:40,0 chr2 170366753 . T . PASS END=170366753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1426:0,76,255:38,0 chr2 170366754 . G . PASS END=170367390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:37:0,87,1305:0,90,255:40,0 chr2 170367391 . T . PASS END=170367391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1112:0,77,255:27,0 chr2 170367392 . C . PASS END=170367398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1180:0,83,255:31,0 chr2 170371084 . C . PASS END=170371090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:19,0 chr2 170371091 . G . PASS END=170371098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:26,0 chr2 170371099 . T . PASS END=170371102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 170371103 . A . PASS END=170371103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,980:0,48,255:28,0 chr2 170371104 . A . PASS END=170371104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 170371105 . T . PASS END=170371105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:28,0 chr2 170371106 . G . PASS END=170371241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:31:0,89,1097:0,89,255:40,0 chr2 170371364 . G . PASS END=170371471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:56:0,117,1755:0,138,255:40,0 chr2 170374700 . A . PASS END=170374704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,999:0,71,255:26,0 chr2 170374705 . G . PASS END=170374705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 170374706 . T . PASS END=170374706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:27,0 chr2 170374707 . A . PASS END=170374711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 170374712 . C . PASS END=170374712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:30,0 chr2 170374713 . A . PASS END=170374885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:32:0,81,1215:0,92,255:40,1 chr2 170377371 . A . PASS END=170377388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1218:0,86,255:36,0 chr2 170377389 . A . PASS END=170377389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:32,0 chr2 170377390 . T . PASS END=170377405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:35,0 chr2 170377406 . G . PASS END=170377406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1253:0,75,255:33,0 chr2 170377407 . C . PASS END=170377511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:37:0,83,1291:0,83,255:40,0 chr2 170377512 . A . PASS END=170377517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:33:0,69,1035:0,99,255:25,0 chr2 170382095 . G . PASS END=170382206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,109,1755:0,109,255:40,0 chr2 170386335 . C . PASS END=170386436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:56:0,120,1800:0,137,255:40,0 chr2 170387097 . C . PASS END=170387211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:56:0,120,1800:0,132,255:40,1 chr2 170387862 . C . PASS END=170387964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:39:0,102,1496:0,105,255:40,0 chr2 170387965 . G . PASS END=170387965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:36,0 chr2 170387966 . A . PASS END=170388000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1075:0,85,255:35,0 chr2 170393737 . C . PASS END=170393850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:42:0,92,1314:0,92,255:40,0 chr2 170394523 . C . PASS END=170394523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1113:0,66,255:31,0 chr2 170394524 . T . PASS END=170394524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1029:0,96,255:32,0 chr2 170394525 . T . PASS END=170394526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1189:0,99,255:34,0 chr2 170394527 . A . PASS END=170394527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1117:0,47,255:32,0 chr2 170394528 . T . PASS END=170394531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:34,0 chr2 170394532 . A . PASS END=170394532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1128:0,78,255:35,0 chr2 170394533 . T . PASS END=170394621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:35:0,83,1296:0,83,255:40,0 chr2 170394622 . G . PASS END=170394622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:33,0 chr2 170394623 . G . PASS END=170394625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:33,0 chr2 170394626 . T . PASS END=170394626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:30,0 chr2 170394627 . C . PASS END=170394635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1286:0,89,255:32,0 chr2 170394636 . C . PASS END=170394636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1170:0,72,255:30,0 chr2 170394637 . G . PASS END=170394638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:32,0 chr2 170394639 . G . PASS END=170394639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:31,0 chr2 170394640 . A . PASS END=170394641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1150:0,85,255:32,0 chr2 170394642 . G . PASS END=170394642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:28,0 chr2 170394643 . G . PASS END=170394643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 170394644 . A . PASS END=170394645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 170394646 . A . PASS END=170394651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:30,0 chr2 170396561 . T . PASS END=170396689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:65:0,120,1800:0,154,255:40,0 chr2 170401231 . C . PASS END=170401345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:49:0,105,1575:0,129,255:40,0 chr2 170402728 . C . PASS END=170402728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 170402729 . T . PASS END=170402731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 170402732 . T . PASS END=170402732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 170402733 . C . PASS END=170402736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,609:0,54,255:18,0 chr2 170402737 . C . PASS END=170402742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,753:0,60,255:24,0 chr2 170402743 . A . PASS END=170402743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,839:0,41,255:23,0 chr2 170402744 . A . PASS END=170402746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr2 170402747 . G . PASS END=170402747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 170402748 . C . PASS END=170402748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 170402749 . C . PASS END=170402992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:27:0,81,919:0,81,255:40,0 chr2 170402993 . A . PASS END=170403029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,104,1715:0,104,255:40,0 chr2 170403030 . T C, 194.02 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,33,0:0,16,0:144:232,147,0,1869,147,1869:255,147,0:0,0:1.9402e+02,1.4402e+02,0.0000e+00,4.5000e+02,1.7879e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,27:0,0,30,19 chr2 170403031 . G . PASS END=170403067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,119,1651:0,119,255:40,0 chr2 170403068 . A . PASS END=170403194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:83:34:0,83,1252:0,83,255:40,0 chr2 170403195 . T . PASS END=170403196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1147:0,63,255:30,0 chr2 170403197 . A . PASS END=170403201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:33:0,84,901:0,84,255:32,0 chr2 170403202 . A . PASS END=170403202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1091:0,71,255:32,0 chr2 170403203 . T . PASS END=170403203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 170403204 . T . PASS END=170403204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:31,0 chr2 170403205 . T . PASS END=170403214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1210:0,86,255:34,0 chr2 170411634 . C . PASS END=170411655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:99:45:0,108,1508:0,108,255:40,0 chr2 170411656 . T . PASS END=170411692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:57:0,120,1800:0,130,255:40,0 chr2 170411693 . T C, 236.59 PASS DP=63;MQ=248.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,29,0:0,34,0:187:274,190,0,374,374,374:255,190,0:0,0:2.3659e+02,1.8659e+02,0.0000e+00,3.7136e+02,4.0613e+02,3.7437e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,30,33:0,0,34,29 chr2 170411694 . A . PASS END=170411730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,138,255:40,0 chr2 170411731 . A . PASS END=170411765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:44:0,116,1620:0,116,255:40,0 chr2 170413697 . C . PASS END=170413714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:32,0 chr2 170413715 . T . PASS END=170413715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 170413716 . T . PASS END=170413765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:32:0,86,1172:0,86,255:40,0 chr2 170413766 . C . PASS END=170413778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:35:0,81,1215:0,105,255:33,0 chr2 170413779 . C . PASS END=170413793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:30:0,60,900:0,74,255:24,0 chr2 170413794 . T . PASS END=170413796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:54:27:0,54,810:0,65,255:19,0 chr2 170413797 . T . PASS END=170413797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,689:0,25,255:16,0 chr2 170413798 . T . PASS END=170413807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:26:0,48,810:0,48,255:19,0 chr2 170415423 . C . PASS END=170415433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,3:76:99:76:0,120,1800:0,156,255:40,0 chr2 170416897 . T . PASS END=170417213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:98:34:0,98,1357:0,98,255:40,0 chr2 170417214 . A . PASS END=170417214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1474:0,77,255:38,0 chr2 170417215 . A . PASS END=170417253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,101,1308:0,101,255:40,0 chr2 170417254 . G . PASS END=170417254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1435:0,71,255:34,0 chr2 170417255 . A . PASS END=170417271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:37:0,81,1211:0,81,255:35,0 chr2 170417272 . T . PASS END=170417282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:32:0,66,990:0,75,255:30,0 chr2 170417283 . G . PASS END=170417283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1133:0,47,255:20,0 chr2 170417284 . A . PASS END=170417284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:66:34:0,66,990:0,85,255:21,0 chr2 170417285 . C . PASS END=170417285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1064:0,44,255:20,0 chr2 170417286 . A . PASS END=170417287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,817:0,28,255:19,0 chr2 170417288 . A . PASS END=170417288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,68,255:19,0 chr2 170417289 . C . PASS END=170417289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,895:0,45,255:19,0 chr2 170417290 . A . PASS END=170417291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:20,0 chr2 170417292 . G . LowGQ END=170417292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:0:27:0,0,754:13,0,255:19,0 chr2 170417293 . G . PASS END=170417293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,862:0,61,255:20,0 chr2 170417294 . A . PASS END=170417294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,804:0,28,255:19,0 chr2 170417295 . A . PASS END=170417295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 170419735 . C . PASS END=170419860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,112,1800:0,112,255:40,0 chr2 170425694 . C . PASS END=170425762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,110,1504:0,110,255:40,0 chr2 170428163 . T . PASS END=170428164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:35,0 chr2 170428165 . T . PASS END=170428510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1202:0,83,255:40,0 chr2 170428511 . G . PASS END=170428539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,825:0,72,255:25,0 chr2 170440877 . A . PASS END=170440919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,303:0,30,255:13,0 chr2 170440920 . T . PASS END=170440920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 170440921 . T . PASS END=170440930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,466:0,39,255:13,0 chr2 170440931 . T . PASS END=170440931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:10,0 chr2 170440932 . C . PASS END=170440932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 170440933 . T . PASS END=170440933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 170440934 . G . PASS END=170440941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,466:0,39,255:13,0 chr2 170440942 . T . PASS END=170440945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,492:0,42,255:15,0 chr2 170440946 . T . PASS END=170440946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 170440947 . T . PASS END=170440951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 170440952 . G . PASS END=170440952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 170440953 . C . PASS END=170441000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr2 170460552 . A . PASS END=170460612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:93:39:0,93,1388:0,93,255:40,0 chr2 170460697 . C . PASS END=170460767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,107,1800:0,107,255:40,0 chr2 170460768 . A . PASS END=170460771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:54:0,120,1800:0,124,255:40,0 chr2 170462549 . G . PASS END=170462656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,117,1755:0,137,255:40,0 chr2 170463614 . G . PASS END=170463658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,2:115:99:110:0,120,1800:0,215,255:40,0 chr2 170465181 . A . PASS END=170465241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:63:0,120,1800:0,158,255:40,0 chr2 170465242 . G . PASS END=170465242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,7:68:20:68:0,20,1802:0,20,255:40,0 chr2 170465243 . G . PASS END=170465243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,8:68:35:68:0,35,1941:0,35,255:40,0 chr2 170465244 . A . PASS END=170465244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 170465245 . T . LowGQ END=170465245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,12:68:0:68:0,0,1577:18,0,255:40,0 chr2 170465246 . A . PASS END=170465251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,153,255:40,0 chr2 170465252 . G . PASS END=170465252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,7:64:52:64:0,52,1588:0,52,255:40,0 chr2 170465253 . G . PASS END=170465268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,114,1800:0,114,255:40,0 chr2 170470974 . A . PASS END=170471003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:60:0,120,1800:0,172,255:40,0 chr2 170471095 . G . PASS END=170471234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:85:34:0,85,1150:0,85,255:40,0 chr2 170487284 . T . PASS END=170487293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 170487294 . A . PASS END=170487294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 170487295 . G . PASS END=170487295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 170487296 . A . PASS END=170487306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,968:0,68,255:26,0 chr2 170487307 . C . PASS END=170487315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 170487316 . T . PASS END=170487316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 170487317 . C . PASS END=170487497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:89:31:0,89,1202:0,89,255:40,0 chr2 170488109 . T . PASS END=170488157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:93:0,120,1800:0,220,255:40,0 chr2 170488276 . T . PASS END=170488443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,106,1730:0,106,255:40,0 chr2 170489670 . T . PASS END=170489672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1333:0,95,255:35,0 chr2 170489673 . T . PASS END=170489673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1286:0,56,255:33,0 chr2 170489674 . C . PASS END=170489814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:39:0,102,1383:0,105,255:40,0 chr2 170492602 . C . PASS END=170492604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 170492605 . T . PASS END=170492605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 170492606 . A . PASS END=170492613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 170492614 . C . PASS END=170492614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 170492615 . C . PASS END=170492618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1092:0,87,255:29,0 chr2 170492619 . C . PASS END=170492619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 170492620 . A . PASS END=170492620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1124:0,87,255:29,0 chr2 170492621 . G . PASS END=170492621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 170492622 . A . PASS END=170492738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:32:0,86,1075:0,86,255:40,0 chr2 170492923 . G . PASS END=170494033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:93:38:0,93,1395:0,98,255:40,2 chr2 170502351 . C . PASS END=170502352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 170502353 . A . PASS END=170502353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 170502354 . C . PASS END=170502692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:29:0,87,1072:0,87,255:40,0 chr2 170505692 . C . PASS END=170505856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:51:0,120,1800:0,140,255:40,0 chr2 170506839 . C . PASS END=170507031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:93:41:0,93,1395:0,100,255:40,0 chr2 170510585 . C . PASS END=170510724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:90:46:0,90,1350:0,134,255:40,0 chr2 170518790 . A . PASS END=170518946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:135,0:135:99:84:0,120,1800:0,190,255:40,0 chr2 170531086 . T . PASS END=170531279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:38:0,102,1457:0,102,255:40,0 chr2 170531377 . A . PASS END=170531550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,2:107:99:62:0,120,1800:0,148,255:40,0 chr2 170537517 . T . PASS END=170537743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:38:0,101,1441:0,101,255:40,0 chr2 170537780 . G . PASS END=170537826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,145,255:40,0 chr2 170550771 . C . PASS END=170550837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:40:0,115,1528:0,115,255:40,0 chr2 170557482 . A . PASS END=170558207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:45:0,105,1552:0,105,255:40,0 chr2 170591525 . A . PASS END=170592547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:38:0,90,1360:0,90,255:40,0 chr2 170592548 . T . PASS END=170592548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1407:0,66,255:39,0 chr2 170592549 . A . PASS END=170592717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1058:0,84,255:40,0 chr2 170592718 . T . PASS END=170592737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,937:0,62,255:26,0 chr2 170597895 . G . PASS END=170597911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:33:0,96,1440:0,99,255:35,0 chr2 170597912 . G . PASS END=170597912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1326:0,67,255:34,0 chr2 170597913 . C . PASS END=170597926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:38:0,93,1329:0,97,255:35,0 chr2 170597927 . G . PASS END=170597927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:37,0 chr2 170597928 . A . PASS END=170598047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,105,1590:0,105,255:40,0 chr2 170605932 . A . PASS END=170605932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 170605933 . A . PASS END=170605933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 170605934 . T . PASS END=170605943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:25,0 chr2 170605944 . G . PASS END=170605980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1120:0,93,255:40,0 chr2 170605981 . C T, 172.96 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,22,0:0,20,0:123:211,126,0,1583,126,1583:255,126,0:0,0:1.7296e+02,1.2296e+02,0.0000e+00,4.5000e+02,1.5773e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,23:0,0,23,19 chr2 170605982 . G . PASS END=170606018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,109,1445:0,109,255:40,0 chr2 170606019 . A . PASS END=170606201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:40:0,90,1350:0,101,255:40,0 chr2 170606202 . C . PASS END=170606225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,61,255:26,0 chr2 170606226 . G . PASS END=170606242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,737:0,47,255:19,0 chr2 170629830 . G . PASS END=170629867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,121,255:40,0 chr2 170632951 . G . LowGQ END=170632959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:33,1:34:0:33:0,0,0:0,85,255:1,0 chr2 170632960 . C CA,CAA, 137.11 PASS DP=33;MQ=250.00;FractionInformativeReads=0.970 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,2,0:0.938,0.062,0.000:32:0,16,1,0:0,14,1,0:81:163,90,0,367,63,133,467,467,467,467:255,83,0:0,50:1.3711e+02,8.7109e+01,0.0000e+00,3.6375e+02,8.2842e+01,1.3284e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,23.00,26.01,23.00,46.00,26.01,34.77,57.77,57.77,37.78:0,0,17,15:0,0,14,18 chr2 170632961 . A . LowGQ END=170632961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,32:33:0:33:0,0,0:255,60,0:29,1 chr2 170632962 . A . PASS END=170632966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 170632967 . A . PASS END=170632968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 170632969 . C A, 138.16 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,17,0:0,15,0:88:176,91,0,276,276,276:255,96,0:0,0:1.3816e+02,8.8159e+01,0.0000e+00,2.7293e+02,3.0770e+02,2.7594e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,15:0,0,14,18 chr2 170632970 . C . PASS END=170632982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:65:32:0,65,990:0,65,255:25,0 chr2 170657471 . A . PASS END=170657472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 170657473 . G . PASS END=170657536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1127:0,83,255:34,0 chr2 170661984 . T . PASS END=170662087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,125,255:40,0 chr2 170662175 . G . PASS END=170662349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:38:0,104,1488:0,104,255:40,0 chr2 170663295 . A . PASS END=170663402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:49:0,113,1800:0,113,255:40,0 chr2 170663481 . G . PASS END=170663581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,164,255:40,0 chr2 170664992 . G . PASS END=170665063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:85:0,120,1800:0,210,255:40,1 chr2 170665370 . G . PASS END=170665412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:100:0,120,1800:0,255,255:40,0 chr2 170666793 . A . PASS END=170666793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,902:0,73,255:29,0 chr2 170666794 . A . PASS END=170666811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:30:0,86,1072:0,86,255:36,0 chr2 170666812 . T . PASS END=170666812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1233:0,78,255:33,0 chr2 170666813 . T . PASS END=170666897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1242:0,91,255:40,0 chr2 170666898 . A . PASS END=170666898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:35,0 chr2 170666899 . T . PASS END=170666901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1266:0,91,255:36,0 chr2 170666902 . A . PASS END=170666902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr2 170666903 . A . PASS END=170666908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,92,255:31,0 chr2 170666909 . A . PASS END=170666909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:25,0 chr2 170666910 . G . PASS END=170666912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,92,255:27,0 chr2 170666913 . T . PASS END=170666920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,68,255:24,0 chr2 170666921 . A . PASS END=170666921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:26:0,57,855:0,62,255:19,0 chr2 170666922 . G . PASS END=170666930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 170666931 . G . PASS END=170666933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,767:0,50,255:18,0 chr2 170667368 . G . PASS END=170667486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:94:44:0,94,1580:0,94,255:40,0 chr2 170667487 . G . PASS END=170667487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,7:71:68:71:0,68,2032:0,68,255:40,0 chr2 170667488 . G . PASS END=170667554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,114,1800:0,114,255:40,0 chr2 170667693 . G . PASS END=170667833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:44:0,111,1665:0,132,255:40,0 chr2 170668178 . G . PASS END=170668266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,167,255:40,0 chr2 170668330 . T . PASS END=170668368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,145,255:40,0 chr2 170668882 . C . PASS END=170669031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:48:0,120,1800:0,128,255:40,0 chr2 170671986 . C . PASS END=170672038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,3:94:99:82:0,120,1800:0,232,255:40,0 chr2 170676071 . T . PASS END=170676153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,157,255:40,0 chr2 170677602 . C . PASS END=170677718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,105,1530:0,105,255:40,0 chr2 170677719 . A . PASS END=170677719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,6:62:71:62:0,71,1593:0,71,255:40,0 chr2 170677720 . C . PASS END=170677783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:42:0,87,1423:0,87,255:40,0 chr2 170678453 . C . PASS END=170678533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,106,1733:0,106,255:40,0 chr2 170678534 . T . PASS END=170678549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:52:0,96,1440:0,140,255:40,0 chr2 170678550 . T . PASS END=170678554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:72:50:0,72,1080:0,103,255:24,0 chr2 170678555 . T . PASS END=170678567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:51:27:0,51,765:0,64,255:19,0 chr2 170680999 . C . PASS END=170681088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:41:0,99,1543:0,99,255:40,0 chr2 170681089 . T . PASS END=170681089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1660:0,75,255:37,0 chr2 170681090 . A . PASS END=170681107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1474:0,110,255:40,0 chr2 170684018 . A . PASS END=170684021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,147:3,0 chr2 170684022 . C . PASS END=170684038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 170684039 . G . LowGQ END=170684039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 170684040 . C . PASS END=170684042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,155:0,12,155:5,0 chr2 170684043 . T . PASS END=170684043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:5,0 chr2 170684044 . C . PASS END=170684058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:6,0 chr2 170684059 . G . PASS END=170684070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 170684071 . G . PASS END=170684078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 170684079 . C . PASS END=170684091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 170684092 . C . PASS END=170684101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 170684102 . G . PASS END=170684138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr2 170684139 . G T, 0.33 DRAGENSnpHardQUAL DP=5;MQ=250.00;MQRankSum=0.731;ReadPosRankSum=-0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:4,1,0:0.200,0.000:5:3,0,0:1,1,0:11:24,0,50,36,143,179:24,0,140:4,0:3.2901e-01,1.1370e+01,6.4370e+01,4.7138e+01,1.8915e+02,1.9315e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,2,0,1:3,1,1,0 chr2 170684140 . G . PASS END=170684142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr2 170684143 . G . LowGQ END=170684143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 170684144 . G . PASS END=170684153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 170684154 . C . PASS END=170684176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:2:0,3,45:0,6,55:2,0 chr2 170684177 . C . LowDepth;LowGQ END=170684272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 170684273 . G . PASS END=170684284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:4,0 chr2 170684285 . G . LowGQ END=170684285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 170684286 . C . PASS END=170684289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 170684290 . G . PASS END=170684310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:8,0 chr2 170684311 . G . PASS END=170684311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 170684312 . G . PASS END=170684324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,243:0,24,243:9,0 chr2 170684325 . G . PASS END=170684327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 170684328 . A . PASS END=170684329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 170684330 . G . PASS END=170684337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 170684338 . C . PASS END=170684338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 170684339 . T . PASS END=170684350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:12,0 chr2 170684351 . C . PASS END=170684351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 170684352 . G . PASS END=170684373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 170684374 . C . PASS END=170684414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,476:0,42,255:17,0 chr2 170684415 . G . PASS END=170684415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 170684416 . C . PASS END=170684422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 170684423 . T . PASS END=170684423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 170684424 . G . PASS END=170684507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,615:0,43,255:19,0 chr2 170684508 . G . PASS END=170684508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 170684509 . C . PASS END=170684513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 170684514 . C . PASS END=170684514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 170684515 . C . PASS END=170684515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 170684516 . G . PASS END=170684516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 170684517 . G . PASS END=170684518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,682:0,54,255:18,0 chr2 170684519 . G . PASS END=170684519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:16,0 chr2 170684520 . G . PASS END=170684529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 170684530 . C . PASS END=170684530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 170684531 . T . PASS END=170684531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:15,0 chr2 170684532 . G . PASS END=170684532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 170684533 . C . PASS END=170684533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,628:0,23,255:16,0 chr2 170684534 . G . PASS END=170684541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:16,0 chr2 170684542 . C . PASS END=170684542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 170684543 . A . PASS END=170684543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 170684544 . A . PASS END=170684544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 170684545 . C . PASS END=170684561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,544:0,48,255:16,0 chr2 170684562 . G . PASS END=170684562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 170728746 . G . PASS END=170728885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:38:0,81,1215:0,114,255:40,0 chr2 170732301 . C . PASS END=170732444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:28:0,84,1017:0,84,255:40,0 chr2 170732445 . A . PASS END=170732459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:25,0 chr2 170734004 . G . PASS END=170734147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:40:0,81,1376:0,81,255:40,0 chr2 170735035 . G . PASS END=170735084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,195,255:40,0 chr2 170747675 . G . PASS END=170747741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:69:0,120,1800:0,184,255:40,0 chr2 170751691 . A . PASS END=170751821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:50:0,120,1800:0,141,255:40,0 chr2 170753017 . G . PASS END=170753225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:39:0,104,1278:0,104,255:40,0 chr2 170753226 . T . PASS END=170753226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1283:0,73,255:35,0 chr2 170753227 . A . PASS END=170753234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1372:0,98,255:36,0 chr2 170753235 . T . PASS END=170753235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:34,0 chr2 170753236 . G . PASS END=170753245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,92,255:35,0 chr2 170761624 . A . PASS END=170761803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:44:0,93,1530:0,93,255:40,0 chr2 170762541 . G . PASS END=170762673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1202:0,85,255:40,0 chr2 170762674 . G . PASS END=170762674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,964:0,60,255:25,0 chr2 170770570 . G . PASS END=170770656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:62:0,120,1800:0,162,255:40,0 chr2 170780439 . C . PASS END=170780504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:69:0,120,1800:0,185,255:40,0 chr2 170780594 . G . PASS END=170780683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,114,1710:0,123,255:40,0 chr2 170782129 . G . PASS END=170782257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:38:0,109,1422:0,109,255:40,0 chr2 170783202 . G . PASS END=170783254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:89:0,120,1800:0,222,255:40,1 chr2 170783348 . A . PASS END=170783481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,120,1800:0,151,255:40,0 chr2 170783830 . G . PASS END=170783917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,120,1800:0,134,255:40,0 chr2 170785237 . A . PASS END=170785378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:84:43:0,84,1260:0,117,255:40,0 chr2 170789422 . C . PASS END=170789518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:41:0,114,1710:0,123,255:40,0 chr2 170799003 . T . PASS END=170799135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:39:0,93,1395:0,103,255:40,0 chr2 170799136 . C . PASS END=170799136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:29,0 chr2 170799137 . T . PASS END=170799140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,97,255:30,0 chr2 170799141 . C . PASS END=170799144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:33:0,72,1080:0,83,255:26,0 chr2 170802798 . A . PASS END=170802798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,742:0,72,255:26,0 chr2 170802799 . T . PASS END=170802801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 170802802 . T . PASS END=170802802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 170802803 . G . PASS END=170802804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 170802805 . T . PASS END=170802805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 170802806 . G . PASS END=170802808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 170802809 . T . PASS END=170802809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:27,0 chr2 170802810 . C . PASS END=170802817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:31,0 chr2 170802818 . T . PASS END=170802818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,890:0,76,255:29,0 chr2 170802819 . C . PASS END=170802902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:31:0,89,1286:0,89,255:40,0 chr2 170804052 . G . PASS END=170804079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:39:0,110,1407:0,110,255:40,0 chr2 170804080 . A . PASS END=170804225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:49:0,120,1800:0,121,255:40,0 chr2 170804415 . A . PASS END=170804447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,219,255:40,0 chr2 170806115 . A . PASS END=170806326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,120,1407:0,120,255:40,0 chr2 170806327 . A . PASS END=170806327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,7:57:53:57:0,53,1248:0,53,255:40,0 chr2 170806328 . C . PASS END=170806565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:33:0,84,1260:0,95,255:40,0 chr2 170806566 . A . PASS END=170806571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,83,255:26,0 chr2 170806572 . A . PASS END=170806573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 170806574 . A . PASS END=170806575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr2 170814948 . G . PASS END=170815036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,112,1800:0,112,255:40,0 chr2 170820903 . T . PASS END=170820979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:64:0,120,1800:0,176,255:40,0 chr2 170843155 . A . PASS END=170843169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,707:0,60,255:24,0 chr2 170843170 . A . PASS END=170843170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:23,0 chr2 170843171 . T . PASS END=170843172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 170843173 . T . PASS END=170843196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1164:0,80,255:32,0 chr2 170843197 . A . PASS END=170843197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1123:0,58,255:31,0 chr2 170843198 . A . PASS END=170843202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:32,0 chr2 170843203 . A . PASS END=170843203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr2 170843204 . G . PASS END=170843280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,92,255:37,0 chr2 170843281 . T . PASS END=170843304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,825:0,66,255:25,0 chr2 170850833 . T . PASS END=170850965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:42:0,90,1350:0,121,255:40,0 chr2 170850966 . T . PASS END=170850966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:78:42:0,78,1170:0,87,255:26,0 chr2 170857814 . A . PASS END=170857924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,108,1486:0,108,255:40,0 chr2 170863500 . A . PASS END=170863712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:36:0,102,1297:0,104,255:40,0 chr2 170865314 . T . PASS END=170865450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:52:0,118,1800:0,118,255:40,0 chr2 170870351 . A . PASS END=170870482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:63:0,120,1800:0,173,255:40,0 chr2 170871325 . A . PASS END=170871349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:99:0,120,1800:0,251,255:40,0 chr2 170871791 . A . PASS END=170871876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,120,1800:0,160,255:40,0 chr2 170873343 . A . PASS END=170873429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,99,1485:0,99,255:40,0 chr2 170885856 . A . PASS END=170885958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,104,1449:0,104,255:40,0 chr2 170897392 . G . PASS END=170897495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:59:0,120,1800:0,143,255:40,0 chr2 170910329 . G . PASS END=170910462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:52:0,120,1800:0,140,255:40,0 chr2 170911970 . A . PASS END=170911970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 170911971 . C . PASS END=170911971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:21,0 chr2 170911972 . C . PASS END=170911976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,831:0,66,255:26,0 chr2 170911977 . T . PASS END=170911977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 170911978 . A . PASS END=170911978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 170911979 . C . PASS END=170911979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 170911980 . C . PASS END=170911981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 170911982 . G . PASS END=170911983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 170911984 . A . PASS END=170911984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:26,0 chr2 170911985 . T . PASS END=170911986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 170911987 . G . PASS END=170911987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 170911988 . T . PASS END=170912094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:31:0,85,1073:0,85,255:40,0 chr2 170917589 . A . PASS END=170917696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:43:0,113,1543:0,113,255:40,0 chr2 170917828 . G . PASS END=170917934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:61:0,120,1800:0,170,255:40,0 chr2 170917935 . A . PASS END=170917953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,120,1800:0,172,255:40,0 chr2 170929938 . G . PASS END=170930056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:36:0,102,1530:0,106,255:40,0 chr2 170930057 . T . PASS END=170930057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:53:49:0,53,1546:0,53,255:40,0 chr2 170930058 . A . PASS END=170930116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:36:0,81,1305:0,81,255:40,0 chr2 170930117 . G . PASS END=170930117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:27,0 chr2 170936324 . G . PASS END=170936328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:26,0 chr2 170936329 . G . PASS END=170936486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:28:0,83,1001:0,83,255:40,0 chr2 170936487 . T . PASS END=170936487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 170936488 . G . PASS END=170936492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 170936493 . G . PASS END=170936525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:26,0 chr2 170936526 . G . PASS END=170936527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr2 170936528 . G . PASS END=170936528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 170936529 . T . PASS END=170936529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 170936530 . A . PASS END=170936532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 170936533 . G . PASS END=170936533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 170937055 . C . PASS END=170937057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr2 170937058 . T . PASS END=170937194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:93:32:0,93,1395:0,96,255:40,0 chr2 170938236 . G . PASS END=170938353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:56:0,120,1800:0,152,255:40,0 chr2 171034798 . A . PASS END=171034799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 171036663 . A . PASS END=171036691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,149,255:40,0 chr2 171055718 . G . PASS END=171055726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,828:0,75,255:26,0 chr2 171055727 . G . PASS END=171055730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 171055731 . G . PASS END=171055731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 171055732 . G . PASS END=171055891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:33:0,84,1260:0,99,255:40,0 chr2 171055892 . T . PASS END=171055892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 171055893 . C . PASS END=171055897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,94,255:27,0 chr2 171055898 . C . PASS END=171055901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,99,255:24,0 chr2 171056660 . G . PASS END=171056789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:84:35:0,84,1260:0,92,255:40,0 chr2 171056790 . T . PASS END=171056794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 171070889 . C . PASS END=171070911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,120,1800:0,129,255:40,0 chr2 171070912 . T C, 221.56 PASS DP=58;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,58,0:1.000,0.000:58:0,20,0:0,38,0:172:259,175,0,2238,175,2238:255,178,0:0,0:2.2156e+02,1.7156e+02,0.0000e+00,4.5000e+02,2.0633e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,25:0,0,29,29 chr2 171070913 . G . PASS END=171070949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,167,255:40,0 chr2 171070950 . T . PASS END=171070993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,142,255:40,0 chr2 171071239 . G . PASS END=171071331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,2:64:99:49:0,120,1800:0,135,255:40,0 chr2 171071332 . G . PASS END=171071338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,140,255:40,0 chr2 171073829 . G . PASS END=171073829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 171073830 . T . PASS END=171073830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:24,0 chr2 171073831 . G . PASS END=171073844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 171073845 . C . PASS END=171073849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 171073850 . G . PASS END=171073882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1120:0,83,255:33,0 chr2 171073883 . C . PASS END=171073886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,77,255:25,0 chr2 171073887 . G A, 136.83 PASS DP=30;MQ=249.48;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,13,0:0,17,0:87:175,90,0,1126,90,1126:255,90,0:0,0:1.3683e+02,8.6829e+01,0.0000e+00,4.5000e+02,1.2160e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,16:0,0,13,17 chr2 171073888 . T . PASS END=171073905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,945:0,62,255:25,0 chr2 171092501 . G . PASS END=171092504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 171092505 . T . PASS END=171092505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 171092506 . T . PASS END=171092549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:30:0,88,1119:0,88,255:37,0 chr2 171092550 . A . PASS END=171092550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:35,0 chr2 171092551 . C . PASS END=171092582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:37:0,96,1364:0,101,255:39,0 chr2 171092583 . T . PASS END=171092583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:31,0 chr2 171092584 . G . PASS END=171092607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1099:0,80,255:32,0 chr2 171092608 . T . PASS END=171092616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 171092617 . T . PASS END=171092620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 171092621 . G . PASS END=171092621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr2 171092622 . T . PASS END=171092623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 171092624 . A . PASS END=171092644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:26:0,63,939:0,67,255:26,0 chr2 171092645 . A . PASS END=171092645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 171092646 . G . PASS END=171092646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 171191895 . A . PASS END=171191960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:80:0,120,1800:0,224,255:40,2 chr2 171207784 . A . PASS END=171207788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,182,255:40,0 chr2 171225732 . G . PASS END=171225734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr2 171225735 . T . PASS END=171225735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 171225736 . C . PASS END=171225743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,894:0,75,255:26,0 chr2 171225744 . G . PASS END=171225747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:28,0 chr2 171225748 . T . PASS END=171225749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 171225750 . T . PASS END=171225869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:29:0,81,1141:0,87,255:40,0 chr2 171225870 . T . PASS END=171225870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1429:0,74,255:36,0 chr2 171225871 . C . PASS END=171225887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1352:0,100,255:39,0 chr2 171228083 . C . PASS END=171228155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:55:0,120,1800:0,149,255:40,0 chr2 171228156 . G . PASS END=171228179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:81:71:0,81,1215:0,196,255:40,0 chr2 171228180 . T . PASS END=171228186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:72:69:0,72,1080:0,197,255:26,0 chr2 171228187 . T . PASS END=171228194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:42:68:0,42,630:0,174,255:18,0 chr2 171228195 . A . PASS END=171228199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:36:63:0,36,540:0,99,255:13,3 chr2 171228200 . GAA GA,G,TAA, 80.93 PASS DP=64;MQ=249.52;MQRankSum=5.648;ReadPosRankSum=1.271;FractionInformativeReads=0.969;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:14,43,4,1,0:0.694,0.065,0.016,0.000:62:6,21,3,0,0:8,22,1,1,0:31:95,34,0,290,114,172,464,162,648,220,748,748,748,748,748:255,0,255:11,67:8.0934e+01,3.0934e+01,3.5043e-03,2.8738e+02,1.2208e+02,1.7208e+02,4.5000e+02,1.9411e+02,4.5000e+02,2.4411e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,11.00,14.01,11.00,22.00,14.01,34.77,45.77,45.77,37.78,34.77,45.77,45.77,69.54,37.78:5,9,14,34:9,5,26,22 chr2 171228201 . A . LowGQ END=171228202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:14,66:80:0:66:0,0,0:255,0,255:40,62 chr2 171228203 . A . PASS END=171228203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,4:65:52:65:0,52,2099:0,52,255:40,1 chr2 171228204 . A . PASS END=171228226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,142,255:40,0 chr2 171238526 . G . PASS END=171238637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:56:0,120,1800:0,127,255:40,0 chr2 171239583 . G . PASS END=171239699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:38:0,87,1305:0,114,255:40,0 chr2 171240220 . T . PASS END=171240324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:41:0,84,1260:0,102,255:40,0 chr2 171242699 . T . PASS END=171242723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:37:0,80,1215:0,80,255:40,0 chr2 171242724 . G . PASS END=171242760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,99,1485:0,118,255:40,0 chr2 171242761 . G A, 172.49 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,19,0:0,23,0:122:210,125,0,1570,125,1570:255,126,0:0,0:1.7249e+02,1.2249e+02,0.0000e+00,4.5000e+02,1.5726e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,26:0,0,21,21 chr2 171242762 . C . PASS END=171242782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1280:0,94,255:37,0 chr2 171243616 . G . PASS END=171243818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,110,1528:0,110,255:40,1 chr2 171248030 . G . PASS END=171248128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:41:0,106,1257:0,106,255:40,0 chr2 171248891 . G . PASS END=171249001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:34:0,86,1305:0,86,255:40,0 chr2 171249002 . C . PASS END=171249002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 171249003 . A . PASS END=171249003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 171249004 . A . PASS END=171249005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr2 171256698 . G . PASS END=171256699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 171256700 . G . PASS END=171256722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1070:0,84,255:36,0 chr2 171256723 . T . PASS END=171256723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr2 171256724 . G . PASS END=171256824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:32:0,83,1156:0,83,255:40,0 chr2 171257991 . C . PASS END=171258113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:28:0,80,1047:0,80,255:40,0 chr2 171258114 . A . PASS END=171258114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:26,0 chr2 171258115 . C . PASS END=171258118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 171258119 . A . PASS END=171258120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 171258121 . G . PASS END=171258124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 171258125 . A . PASS END=171258127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 171258128 . G . PASS END=171258128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 171258129 . C . PASS END=171258140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:24,0 chr2 171258141 . G . PASS END=171258149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 171258150 . G . PASS END=171258159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 171258160 . G . PASS END=171258173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr2 171258174 . C . PASS END=171258180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:12,0 chr2 171258181 . G . PASS END=171258181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,482:0,6,255:10,0 chr2 171258182 . C . PASS END=171258198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 171258199 . A . PASS END=171258201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 171259358 . T . PASS END=171259505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,105,1435:0,117,255:40,0 chr2 171260757 . A . PASS END=171260761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,909:0,75,255:26,0 chr2 171260762 . A . PASS END=171260768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr2 171260769 . A . PASS END=171260769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 171260770 . A . PASS END=171260770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:23,0 chr2 171260771 . T . PASS END=171260781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr2 171260782 . A . PASS END=171260786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:35,0 chr2 171260787 . G A, 154.89 PASS DP=37;MQ=250.00;FractionInformativeReads=0.973 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,13,0:0,23,0:105:193,108,0,1362,108,1362:255,108,0:0,0:1.5489e+02,1.0489e+02,0.0000e+00,4.5000e+02,1.3966e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,15:0,0,20,16 chr2 171260788 . T . PASS END=171260819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,102,1431:0,104,255:40,0 chr2 171260820 . T C, 188.45 PASS DP=48;MQ=250.00;FractionInformativeReads=0.979 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,17,0:0,30,0:138:226,141,0,1814,141,1814:255,141,0:0,0:1.8845e+02,1.3845e+02,0.0000e+00,4.5000e+02,1.7322e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,19:0,0,22,25 chr2 171260821 . T . PASS END=171260857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,120,255:40,0 chr2 171260858 . A . PASS END=171260910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:35:0,96,1440:0,105,255:40,0 chr2 171262055 . A . PASS END=171262143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,129,255:40,0 chr2 171264225 . G . PASS END=171264354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,100,1360:0,100,255:40,0 chr2 171300477 . G . PASS END=171300556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,120,1800:0,127,255:40,0 chr2 171319878 . G . PASS END=171319955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:47:0,120,1800:0,129,255:40,0 chr2 171323016 . T . PASS END=171323019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 171323020 . C . PASS END=171323020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 171323021 . T . PASS END=171323037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,961:0,75,255:26,0 chr2 171323038 . C . PASS END=171323120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,972:0,84,255:38,0 chr2 171323121 . A . PASS END=171323121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1311:0,75,255:32,0 chr2 171323122 . G . PASS END=171323181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:37,0 chr2 171323182 . G . PASS END=171323205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr2 171323206 . A . PASS END=171323206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 171323207 . A . PASS END=171323221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 171355102 . G . PASS END=171355160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,111,1674:0,111,255:40,0 chr2 171355161 . T . PASS END=171355197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:49:0,108,1620:0,134,255:40,0 chr2 171355198 . A G, 193.55 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,26,0:0,23,0:144:231,147,0,1832,147,1832:255,147,0:0,0:1.9355e+02,1.4355e+02,0.0000e+00,4.5000e+02,1.7832e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,30:0,0,28,21 chr2 171355199 . C . PASS END=171355213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1372:0,101,255:37,0 chr2 171356156 . G . PASS END=171356185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1128:0,81,255:38,0 chr2 171356186 . T . PASS END=171356187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:36,0 chr2 171356188 . A . PASS END=171356189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 171356190 . A . PASS END=171356190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:36,0 chr2 171356191 . T . PASS END=171356236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:97:37:0,97,1252:0,97,255:40,0 chr2 171356237 . T . PASS END=171356273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:52:0,120,1800:0,129,255:40,0 chr2 171356274 . G A, 200.03 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,25,0:0,26,0:150:238,153,0,1930,153,1930:255,153,0:0,0:2.0003e+02,1.5003e+02,0.0000e+00,4.5000e+02,1.8480e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,36:0,0,21,30 chr2 171356275 . G . PASS END=171356297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:85:43:0,85,1302:0,85,255:40,0 chr2 171356298 . G . PASS END=171356298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:56:43:0,56,1092:0,56,255:32,0 chr2 171356299 . A . PASS END=171356299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,105,1575:0,109,255:34,0 chr2 171356300 . G . PASS END=171356300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:28:43:0,28,925:0,28,255:29,0 chr2 171356301 . C . PASS END=171356311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:36:0,96,1380:0,101,255:34,0 chr2 171356312 . C . PASS END=171356318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr2 171358295 . C . PASS END=171358375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:64:0,120,1800:0,188,255:40,1 chr2 171371431 . G . PASS END=171371532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:39:0,96,1407:0,116,255:40,0 chr2 171375948 . T . PASS END=171375953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1145:0,80,255:31,0 chr2 171375954 . G . PASS END=171375954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 171375955 . G . PASS END=171376050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:32:0,88,1121:0,88,255:40,0 chr2 171383605 . G . PASS END=171383712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,123,255:40,0 chr2 171399416 . G . PASS END=171399476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,143,255:40,0 chr2 171400402 . C . PASS END=171400493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:36:0,84,1208:0,87,255:40,0 chr2 171400494 . G . PASS END=171400494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1219:0,69,255:32,0 chr2 171400495 . C . PASS END=171400498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1241:0,89,255:32,0 chr2 171503419 . C . PASS END=171503449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,150,255:40,0 chr2 171508138 . G . PASS END=171508224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:41:0,95,1440:0,95,255:40,0 chr2 171508225 . T . PASS END=171508232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:34:0,88,1037:0,88,255:31,0 chr2 171508233 . A . PASS END=171508233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 171508234 . A . PASS END=171508238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 171508239 . T . PASS END=171508239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1062:0,79,255:29,0 chr2 171508240 . T . PASS END=171508241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 171508242 . A . PASS END=171508242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 171508243 . A . PASS END=171508244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 171508618 . G . PASS END=171508664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,146,255:40,0 chr2 171509493 . C . PASS END=171509631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:34:0,85,1142:0,85,255:40,0 chr2 171572023 . A . PASS END=171572073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:19,0 chr2 171572396 . A . PASS END=171572407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,540:0,48,255:17,0 chr2 171572408 . G . PASS END=171572408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 171572409 . C . PASS END=171572413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 171572414 . G . PASS END=171572414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 171572415 . G . PASS END=171572418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 171572419 . G . PASS END=171572419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 171572420 . C . PASS END=171572423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr2 171572424 . G . PASS END=171572427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr2 171572428 . T . PASS END=171572428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,660:0,29,255:19,0 chr2 171572429 . G . PASS END=171572435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 171572436 . T . PASS END=171572436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr2 171572437 . C . PASS END=171572441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 171572442 . C . PASS END=171572442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 171572443 . T . PASS END=171572451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr2 171572452 . C . PASS END=171572452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 171572453 . C . PASS END=171572453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 171572454 . A . PASS END=171572454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 171572455 . C . PASS END=171572487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr2 171572488 . C . PASS END=171572506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 171572507 . T . PASS END=171572508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 171572509 . C . PASS END=171572526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr2 171572527 . T . PASS END=171572532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1061:0,71,255:26,0 chr2 171572533 . T . PASS END=171572542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1049:0,87,255:29,0 chr2 171572543 . A . PASS END=171572543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 171572544 . G . PASS END=171572550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 171572551 . A . PASS END=171572551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 171572552 . A . PASS END=171572563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 171572564 . G . PASS END=171572587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,68,255:25,0 chr2 171572588 . G . PASS END=171572588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,792:0,41,255:21,0 chr2 171572589 . C . PASS END=171572593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 171572594 . A . PASS END=171572594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:22,0 chr2 171572595 . A . PASS END=171572604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,754:0,66,255:22,0 chr2 171572605 . C . PASS END=171572614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:19,0 chr2 171572769 . G . PASS END=171572779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr2 171572780 . C . PASS END=171572792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:9,0 chr2 171572793 . G . PASS END=171572812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,374:0,30,255:11,0 chr2 171572813 . C . PASS END=171572815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 171572816 . G . PASS END=171572816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:9,0 chr2 171572817 . G . PASS END=171572821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 171572822 . G . PASS END=171572833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 171572834 . C . PASS END=171572834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 171572835 . T . PASS END=171572851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,449:0,36,255:13,0 chr2 171572852 . G . PASS END=171572883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 171572884 . A . PASS END=171572884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 171572885 . G . PASS END=171572885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 171572886 . G . PASS END=171572886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 171572887 . T . PASS END=171572902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr2 171572903 . G . PASS END=171572912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr2 171572913 . C . PASS END=171572914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 171572915 . C . PASS END=171572918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 171572919 . A . PASS END=171572919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:13,0 chr2 171572920 . G . PASS END=171572920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 171572921 . G . PASS END=171572934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 171572935 . G . PASS END=171572935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 171572936 . G . PASS END=171572939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 171572940 . G A, 86.13 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,6,0:0,7,0:36:124,39,0,504,39,504:255,39,0:0,0:8.6127e+01,3.6127e+01,1.0596e-03,4.5000e+02,7.0897e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,5:0,0,7,6 chr2 171572941 . C . PASS END=171572962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr2 171572963 . A . PASS END=171572977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,349:0,27,255:9,0 chr2 171572978 . C . PASS END=171572991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr2 171572992 . T . PASS END=171573033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr2 171573034 . G . LowGQ END=171573034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 171573035 . G . PASS END=171573039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 171573040 . C . PASS END=171573051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:3:4:0,3,45:0,12,133:3,0 chr2 171573052 . C . PASS END=171573056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr2 171573057 . A . PASS END=171573059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,186:3,0 chr2 171573060 . C . PASS END=171573075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr2 171573076 . C . PASS END=171573077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 171573078 . T . PASS END=171573078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 171573079 . A . PASS END=171573095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 171573096 . C . PASS END=171573150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 171573151 . C . PASS END=171573184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr2 171573185 . G . PASS END=171573187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,233:6,0 chr2 171573188 . A . PASS END=171573211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,234:8,0 chr2 171573212 . G . PASS END=171573230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr2 171573231 . C . PASS END=171573238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 171573239 . C . LowGQ END=171573240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:10,0,212:6,0 chr2 171573241 . G . PASS END=171573244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 171573245 . C . PASS END=171573245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 171573246 . C . PASS END=171573246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 171573247 . A . PASS END=171573251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 171573252 . T . PASS END=171573252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:5,0 chr2 171573253 . C . PASS END=171573270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 171573271 . A . LowGQ END=171573271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr2 171573272 . C . PASS END=171573277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 171573278 . C . PASS END=171573278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 171573279 . C . PASS END=171573281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr2 171573282 . T . PASS END=171573282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 171573283 . G . PASS END=171573289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr2 171573290 . C . PASS END=171573301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 171573302 . G . LowGQ END=171573302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:15,0,225:6,0 chr2 171573303 . G . PASS END=171573303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 171573304 . G . PASS END=171573343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 171573344 . C . PASS END=171573344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 171573345 . T . PASS END=171573356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:20:10:0,20,360:0,20,255:9,0 chr2 171573357 . G . PASS END=171573360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 171573361 . G . PASS END=171573365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 171573366 . C . LowGQ END=171573366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,266:1,0,255:8,0 chr2 171573367 . C . PASS END=171573380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 171573381 . T . PASS END=171573381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 171573382 . T . LowGQ END=171573382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,316:19,0,255:10,0 chr2 171573383 . C . PASS END=171573384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 171573385 . C . PASS END=171573385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,396:0,5,255:11,0 chr2 171573386 . C . PASS END=171573386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 171573387 . G . PASS END=171573387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,302:0,3,255:10,0 chr2 171573388 . C . PASS END=171573391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,397:0,36,255:12,0 chr2 171573392 . T . PASS END=171573392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,308:0,3,255:10,0 chr2 171573393 . G . PASS END=171573393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 171573394 . C . PASS END=171573401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,374:0,36,255:12,0 chr2 171573402 . G . PASS END=171573402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr2 171573403 . C . PASS END=171573403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,294:0,3,255:10,0 chr2 171573404 . T . PASS END=171573414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,368:0,36,255:12,0 chr2 171573415 . C . PASS END=171573415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 171573416 . C . PASS END=171573433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,390:0,36,255:13,0 chr2 171573434 . C . PASS END=171573434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr2 171573435 . C . PASS END=171573435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 171573436 . T . PASS END=171573436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 171573437 . G . PASS END=171573437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 171573438 . G . PASS END=171573441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 171573442 . T . PASS END=171573442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 171573443 . G . PASS END=171573445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 171573446 . C . PASS END=171573452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 171573453 . G . PASS END=171573454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,455:0,26,255:12,0 chr2 171573455 . C . PASS END=171573455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 171573456 . T . PASS END=171573457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,433:0,23,255:12,0 chr2 171573458 . T . PASS END=171573461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 171573462 . C . PASS END=171573465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 171573466 . A . PASS END=171573471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:10,0 chr2 171573472 . G . PASS END=171573472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:9,0 chr2 171573473 . C . PASS END=171573480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 171573481 . C . PASS END=171573482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 171573483 . G . PASS END=171573483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr2 171573484 . C . PASS END=171573485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 171573486 . C . PASS END=171573487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 171573488 . G . PASS END=171573489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 171573490 . T . PASS END=171573501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 171573502 . C . PASS END=171573502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr2 171573503 . C . PASS END=171573516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:8,0 chr2 171573517 . C . PASS END=171573526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:6,0 chr2 171573527 . G . PASS END=171573527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 171573528 . T . PASS END=171573528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 171573529 . G . PASS END=171573543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 171573544 . G . PASS END=171573576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr2 171573577 . A . PASS END=171573595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 171573596 . G . PASS END=171573596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 171573597 . A . LowGQ END=171573597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,288:6,0,255:10,0 chr2 171573598 . A . PASS END=171573618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 171573619 . C . PASS END=171573632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr2 171573633 . G . PASS END=171573674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:17,0 chr2 171573675 . C . PASS END=171573675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 171573676 . A . PASS END=171573696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,621:0,48,255:19,0 chr2 171573697 . T . PASS END=171573697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 171573698 . G . PASS END=171573702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 171573703 . A . PASS END=171573703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 171573704 . C . PASS END=171573723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,615:0,41,255:19,0 chr2 171573724 . G . PASS END=171573731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr2 171573732 . C . PASS END=171573732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 171573733 . G . PASS END=171573739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 171573740 . C . PASS END=171573740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 171573741 . G . PASS END=171573751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,807:0,66,255:22,0 chr2 171573752 . G . PASS END=171573752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 171573753 . C . PASS END=171573757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 171573758 . G . PASS END=171573758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 171573759 . C . PASS END=171573759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 171573760 . G . PASS END=171573762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 171573763 . C . PASS END=171573767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr2 171573768 . A . PASS END=171573768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 171573769 . C . PASS END=171573806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,939:0,65,255:26,0 chr2 171573807 . C . PASS END=171573835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,947:0,84,255:29,0 chr2 171573836 . G . PASS END=171573838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 171573839 . C . PASS END=171573846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 171573847 . C . PASS END=171573853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 171573854 . G . PASS END=171573860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 171573861 . A . PASS END=171573903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,945:0,75,255:26,0 chr2 171573904 . G . PASS END=171573904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 171573905 . G . PASS END=171573905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 171573906 . G . PASS END=171573914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,810:0,53,255:19,0 chr2 171627192 . A . PASS END=171627195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 171627196 . A . PASS END=171627196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 171627197 . C . PASS END=171627197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 171627198 . A . PASS END=171627198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,443:0,6,255:14,0 chr2 171627199 . C . PASS END=171627215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,535:0,45,255:17,0 chr2 171627216 . T . PASS END=171627216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 171627217 . T . PASS END=171627222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr2 171627223 . C . PASS END=171627223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 171627224 . T . PASS END=171627224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 171627225 . T . PASS END=171627225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 171627226 . C . PASS END=171627227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 171627228 . G . PASS END=171627228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 171627229 . C . PASS END=171627232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 171627233 . C . PASS END=171627233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 171627234 . C . PASS END=171627234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 171627235 . T . PASS END=171627235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 171627236 . G . PASS END=171627240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 171627241 . T . PASS END=171627241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 171627242 . A . PASS END=171627244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 171627245 . C . PASS END=171627245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 171627246 . G . PASS END=171627256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr2 171627257 . G . PASS END=171627259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 171627260 . C . PASS END=171627262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 171627263 . C . PASS END=171627264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 171627265 . A . PASS END=171627273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 171627274 . T . PASS END=171627274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 171627275 . G . PASS END=171627292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 171627293 . G . PASS END=171627297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 171627298 . G . PASS END=171627335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,459:0,36,255:13,0 chr2 171627336 . G . PASS END=171627342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 171627343 . G . PASS END=171627343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:8,0 chr2 171627344 . C . PASS END=171627347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr2 171627348 . G . LowGQ END=171627349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,302:3,0,255:9,0 chr2 171627350 . C . PASS END=171627352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,405:0,20,255:9,0 chr2 171627353 . G . LowGQ END=171627354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,210:3,0,255:7,0 chr2 171627355 . C . PASS END=171627356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:8,0 chr2 171627357 . C . LowGQ END=171627357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:8,0 chr2 171627358 . C . PASS END=171627360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:23:13:0,23,360:0,23,255:8,0 chr2 171627361 . G . LowGQ END=171627361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,280:42,0,255:8,0 chr2 171627362 . G . PASS END=171627362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 171627363 . A . PASS END=171627363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:8,0 chr2 171627364 . C . PASS END=171627366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr2 171627367 . G . LowGQ END=171627367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,257:4,0,255:6,0 chr2 171627368 . C . PASS END=171627370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:12:0,22,405:0,22,255:10,0 chr2 171627371 . C . PASS END=171627373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 171627374 . A . PASS END=171627374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:10,0 chr2 171627375 . G . PASS END=171627381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,540:0,32,255:13,0 chr2 171627382 . C . PASS END=171627382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 171627383 . C . PASS END=171627410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,405:0,36,255:12,0 chr2 171627411 . T . PASS END=171627419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:13,0 chr2 171627420 . C . PASS END=171627427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,635:0,44,255:19,0 chr2 171627428 . C . PASS END=171627428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 171627429 . C . PASS END=171627434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr2 171627435 . G . PASS END=171627435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 171627436 . C . PASS END=171627442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 171627443 . C . PASS END=171627443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 171627444 . C . PASS END=171627454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 171627455 . T . PASS END=171627455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 171627456 . G . PASS END=171627458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 171627459 . T . PASS END=171627459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 171627460 . C . PASS END=171627463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 171627464 . G . PASS END=171627469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,47,255:19,0 chr2 171627470 . C . PASS END=171627473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,43,255:13,0 chr2 171627474 . G . PASS END=171627474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:13,0 chr2 171627475 . G . PASS END=171627475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 171627476 . G . PASS END=171627479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:33:20:0,33,495:0,43,255:12,0 chr2 171627480 . C . LowGQ END=171627480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,416:23,0,255:10,0 chr2 171627481 . C . PASS END=171627483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:19:0,33,495:0,41,255:11,0 chr2 171627484 . T . PASS END=171627484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,437:0,18,255:10,0 chr2 171627485 . G . PASS END=171627485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:30:17:0,30,450:0,34,255:10,0 chr2 171627486 . C . LowGQ END=171627486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,404:21,0,255:9,0 chr2 171627487 . C . PASS END=171627487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:10,0 chr2 171627488 . C . LowGQ END=171627488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,343:24,0,255:9,0 chr2 171627489 . C . PASS END=171627490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:16:0,30,450:0,32,255:10,0 chr2 171627491 . G . LowGQ END=171627491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,347:18,0,255:10,0 chr2 171627492 . C . PASS END=171627492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:9,0 chr2 171627493 . C . PASS END=171627493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:16:0,30,450:0,31,255:10,0 chr2 171627494 . C . PASS END=171627494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:1:16:0,1,473:0,1,255:10,0 chr2 171627495 . C . PASS END=171627495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:10,0 chr2 171627496 . C . PASS END=171627496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 171627497 . G . LowGQ END=171627497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,302:50,0,255:10,0 chr2 171627498 . C . PASS END=171627498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,451:0,28,255:10,0 chr2 171627499 . C . PASS END=171627499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:9,0 chr2 171627500 . C . PASS END=171627501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,28,255:9,0 chr2 171627502 . C . PASS END=171627502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr2 171627503 . G . LowGQ END=171627503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,371:5,0,255:9,0 chr2 171627504 . C . PASS END=171627504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:10,0 chr2 171627505 . C . PASS END=171627505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:10,0 chr2 171627506 . A . LowGQ END=171627506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,5:15:0:15:0,0,261:82,0,255:9,0 chr2 171627507 . C . PASS END=171627507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr2 171627508 . C . PASS END=171627508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 171627509 . T . LowGQ END=171627510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:0:15:0,0,224:0,0,255:11,0 chr2 171627511 . C . PASS END=171627512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:15:0,30,450:0,31,255:11,0 chr2 171627513 . C . PASS END=171627513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:10,0 chr2 171627514 . C . PASS END=171627514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 171627515 . G . LowGQ END=171627515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,5:15:0:15:0,0,216:127,0,255:10,0 chr2 171627516 . C . PASS END=171627516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:11,0 chr2 171627517 . C . PASS END=171627517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 171627518 . G . LowGQ END=171627519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:14:0,0,426:0,0,255:12,0 chr2 171627520 . C . PASS END=171627520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 171627521 . G . LowGQ END=171627521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,355:30,0,255:11,0 chr2 171627522 . C . PASS END=171627524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 171627525 . A . LowGQ END=171627528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,380:0,0,255:11,0 chr2 171627529 . C . PASS END=171627529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 171627530 . C . PASS END=171627530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 171627531 . C . PASS END=171627531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 171627532 . C . PASS END=171627533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 171627534 . A . LowGQ END=171627535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,410:5,0,255:9,0 chr2 171627536 . C . PASS END=171627540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 171627541 . A . PASS END=171627541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr2 171627542 . C . PASS END=171627544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 171627545 . T . PASS END=171627545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:11,0 chr2 171627546 . C . PASS END=171627546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 171627547 . G . LowGQ END=171627548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,349:30,0,255:11,0 chr2 171627549 . C . PASS END=171627549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 171627550 . T . LowGQ END=171627550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,363:16,0,255:10,0 chr2 171627551 . G . PASS END=171627552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,405:0,22,255:10,0 chr2 171627553 . T . PASS END=171627553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:9,0 chr2 171627554 . G . PASS END=171627555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 171627556 . C . PASS END=171627557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 171627558 . G . PASS END=171627560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,449:0,23,255:11,0 chr2 171627561 . C . PASS END=171627561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 171627562 . T . PASS END=171627562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 171627563 . T . PASS END=171627564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:6:13:0,6,393:0,6,255:11,0 chr2 171627565 . C . PASS END=171627565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 171627566 . T . LowGQ END=171627566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr2 171627567 . C . PASS END=171627567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 171627568 . C . PASS END=171627568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 171627569 . A . LowGQ END=171627569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr2 171627570 . C . PASS END=171627594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr2 171627595 . G . LowGQ END=171627595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:11,0 chr2 171627596 . C . PASS END=171627638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 171627639 . G . PASS END=171627675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,435:0,36,255:13,0 chr2 171627676 . T G, 83.12 PASS DP=12;MQ=249.67;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,12,0:1.000,0.000:12:0,3,0:0,9,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,4,8:0,0,7,5 chr2 171627677 . G . PASS END=171627697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,410:0,33,255:11,0 chr2 171633657 . G . PASS END=171633687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:76:0,120,1800:0,212,255:40,0 chr2 171633887 . A . PASS END=171633935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:103:0,120,1800:0,255,255:40,0 chr2 171634154 . A . PASS END=171634194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:83:0,120,1800:0,223,255:40,0 chr2 171636303 . T . PASS END=171636398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:41:0,117,1755:0,121,255:40,0 chr2 171638751 . G . PASS END=171638899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:82:43:0,82,1575:0,82,255:40,0 chr2 171640349 . A . PASS END=171640376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,181,255:40,0 chr2 171641156 . G . PASS END=171641339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:84:31:0,84,1260:0,93,255:40,0 chr2 171641340 . A . PASS END=171641340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 171641341 . G . PASS END=171641343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 171642128 . G . PASS END=171642145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:84:0,120,1800:0,214,255:40,0 chr2 171649373 . T . PASS END=171649401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,160,255:40,0 chr2 171649402 . C T, 49.93 PASS DP=70;MQ=249.82;MQRankSum=7.186;ReadPosRankSum=4.377;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,34,0:0.486,0.000:70:21,12,0:15,22,0:48:85,0,50,1215,1280,2494:255,0,255:31,0:4.9928e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,21,17,17:18,18,17,17 chr2 171649403 . C . PASS END=171649430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,172,255:40,0 chr2 171654551 . T . PASS END=171654622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:59:0,120,1800:0,177,255:40,0 chr2 171655280 . A . PASS END=171655404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,101,1374:0,101,255:40,0 chr2 171672078 . C G, 95.16 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:133,48,0,620,48,620:255,48,0:0,0:9.5156e+01,4.5156e+01,1.3254e-04,4.5000e+02,7.9926e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,10:0,0,12,4 chr2 171672395 . C G, 71.11 PASS DP=8;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,6,0:0,2,0:21:109,24,0,310,24,310:255,24,0:0,0:7.1112e+01,2.1112e+01,3.3765e-02,3.0726e+02,5.5882e+01,3.1026e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,3:0,0,5,3 chr2 171673225 . T . PASS END=171673225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 171673227 . G . PASS END=171673227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 171673330 . C . PASS END=171673330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 171673334 . T . PASS END=171673334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 171673346 . C . PASS END=171673346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 171673367 . G . PASS END=171673367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr2 171673396 . T . PASS END=171673396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 171673446 . G . PASS END=171673446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1233:0,99,255:33,0 chr2 171673461 . G . PASS END=171673461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1312:0,105,255:35,0 chr2 171673475 . G . PASS END=171673475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:28,0 chr2 171673531 . G . PASS END=171673531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 171675049 . C . PASS END=171675049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr2 171675061 . C . PASS END=171675061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 171675073 . A . PASS END=171675073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 171675102 . A . PASS END=171675112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:32,0 chr2 171675113 . G . PASS END=171675129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,64,255:26,0 chr2 171675130 . C . PASS END=171675133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 171675134 . C . PASS END=171675135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 171675136 . C . PASS END=171675141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:22:0,57,855:0,66,255:19,0 chr2 171675142 . A . PASS END=171675149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 171675150 . G . PASS END=171675150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 171675151 . C . PASS END=171675152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 171675153 . G . PASS END=171675178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,46,255:19,0 chr2 171675179 . C . PASS END=171675183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 171678597 . C . PASS END=171678597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,937:0,75,255:25,0 chr2 171678598 . G . PASS END=171678606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:31,0 chr2 171678607 . C . PASS END=171678607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 171678608 . T . PASS END=171678617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1141:0,93,255:31,0 chr2 171678618 . T . PASS END=171678659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,839:0,69,255:26,0 chr2 171685985 . G . PASS END=171685985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 171685986 . C . PASS END=171685986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 171685987 . T . PASS END=171685988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 171685989 . C . PASS END=171685989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 171685990 . T . PASS END=171686003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,903:0,68,255:26,0 chr2 171686004 . C . PASS END=171686004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 171686005 . A . PASS END=171686005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr2 171686006 . G . PASS END=171686006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 171686007 . C . PASS END=171686007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr2 171686008 . C . PASS END=171686008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 171686009 . T . PASS END=171686010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 171686011 . G . PASS END=171686011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 171686012 . A . PASS END=171686015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 171686016 . G . PASS END=171686016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 171686017 . A . PASS END=171686018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 171686019 . G . PASS END=171686019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr2 171686020 . A . PASS END=171686021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 171686022 . T . PASS END=171686022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 171686023 . C . PASS END=171686023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 171686024 . G . PASS END=171686024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 171686025 . C . PASS END=171686025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 171686026 . C . PASS END=171686026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 171686027 . T . PASS END=171686043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:94:33:0,94,1175:0,94,255:37,0 chr2 171686044 . G . PASS END=171686044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1209:0,78,255:35,0 chr2 171686045 . A . PASS END=171686052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1102:0,94,255:37,0 chr2 171686053 . T . PASS END=171686053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1178:0,61,255:30,0 chr2 171686054 . C . PASS END=171686067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:37:0,97,1193:0,97,255:36,0 chr2 171686068 . C . PASS END=171686068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:45:37:0,45,1070:0,45,255:32,0 chr2 171686069 . T . PASS END=171686072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:36,0 chr2 171686073 . C . PASS END=171686073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1144:0,78,255:33,0 chr2 171686074 . T . PASS END=171686076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 171686077 . G . PASS END=171686077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1055:0,77,255:33,0 chr2 171686078 . A . PASS END=171686119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:32:0,93,1312:0,96,255:35,0 chr2 171686120 . A . PASS END=171686153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr2 171686154 . C . PASS END=171686158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:27:0,54,810:0,71,255:19,0 chr2 171686159 . C . PASS END=171686175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:71:27:0,71,1016:0,71,255:26,0 chr2 171687460 . A . PASS END=171687463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 171687464 . G . PASS END=171687464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 171687465 . C . PASS END=171687523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:35:0,90,1280:0,90,255:40,0 chr2 171687524 . A . PASS END=171687524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:36,0 chr2 171687525 . C . PASS END=171687529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:42:0,91,1507:0,91,255:37,0 chr2 171687530 . C . PASS END=171687530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1482:0,52,255:35,0 chr2 171687531 . A . PASS END=171687586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:40:0,81,1366:0,81,255:40,0 chr2 171687587 . A . PASS END=171687587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:35,0 chr2 171687588 . C . PASS END=171687634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,89,255:40,0 chr2 171687635 . C . PASS END=171687666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr2 171687667 . A . PASS END=171687667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:24,0 chr2 171687668 . C . PASS END=171687681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,62,255:25,0 chr2 171687682 . T . PASS END=171687683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 171687684 . A . PASS END=171687689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr2 171687690 . G . PASS END=171687702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 171693303 . G . PASS END=171693393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:35:0,96,1440:0,105,255:40,0 chr2 171699079 . G . PASS END=171699115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,120,1800:0,129,255:40,0 chr2 171700555 . G . PASS END=171700667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:45:0,107,1597:0,107,255:40,0 chr2 171702016 . G . PASS END=171702016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr2 171702017 . G . PASS END=171702019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 171702020 . C . PASS END=171702020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,770:0,23,255:24,0 chr2 171702021 . G . PASS END=171702024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:26,0 chr2 171702025 . T . PASS END=171702025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 171702026 . A . PASS END=171702026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 171702027 . T . PASS END=171702035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:29,0 chr2 171702036 . T . PASS END=171702036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:27,0 chr2 171702037 . A . PASS END=171702038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 171702039 . A . PASS END=171702039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 171702040 . G . PASS END=171702044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1208:0,83,255:31,0 chr2 171702045 . A . PASS END=171702045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:31,0 chr2 171702046 . T . PASS END=171702066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:33,0 chr2 171702067 . T . PASS END=171702067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr2 171702068 . C . PASS END=171702117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1021:0,85,255:37,0 chr2 171702118 . T . PASS END=171702118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:32,0 chr2 171702119 . C . PASS END=171702129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,99,1413:0,104,255:37,0 chr2 171702130 . A . PASS END=171702130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1346:0,68,255:30,0 chr2 171702131 . G . PASS END=171702131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:41:0,85,1450:0,85,255:33,0 chr2 171702140 . G . PASS END=171702140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 171702216 . A . PASS END=171702295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,119,1574:0,119,255:40,0 chr2 171702519 . G . PASS END=171702573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,136,255:40,0 chr2 171702577 . T . PASS END=171702577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,102,1530:0,166,255:34,0 chr2 171704186 . G . PASS END=171704302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,156,255:40,0 chr2 171705193 . G . PASS END=171705203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:72:0,120,1800:0,170,255:40,0 chr2 171705204 . C . PASS END=171705304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:68:0,120,1800:0,152,255:40,0 chr2 171705788 . C . PASS END=171705788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 171705796 . G . PASS END=171705864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,115,1800:0,115,255:40,1 chr2 171705866 . G . PASS END=171705866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 171709224 . G . PASS END=171709302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:34:0,89,1271:0,89,255:40,0 chr2 171710383 . G . PASS END=171710532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,99,1346:0,99,255:40,0 chr2 171713528 . G . PASS END=171713635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,105,1584:0,105,255:40,0 chr2 171715314 . C . PASS END=171715318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 171715319 . G . PASS END=171715319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr2 171715320 . C . PASS END=171715403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1127:0,84,255:40,0 chr2 171715408 . G . PASS END=171715408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 171716219 . G . PASS END=171716236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,913:0,62,255:26,0 chr2 171716237 . G . PASS END=171716392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1211:0,81,255:40,0 chr2 171716634 . A . PASS END=171716634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 171716786 . G . PASS END=171716786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:21,0 chr2 171716811 . T . PASS END=171716811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 171716823 . G . PASS END=171716823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr2 171716953 . A . PASS END=171716953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 171717129 . G . PASS END=171717129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 171717156 . G . PASS END=171717156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:75:0,120,1800:0,209,255:40,0 chr2 171717202 . T . PASS END=171717202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 171717381 . C . PASS END=171717381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 171717493 . G . PASS END=171717493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1205:0,66,255:30,0 chr2 171717521 . C . PASS END=171717521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 171717545 . T . PASS END=171717545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 171717597 . G . PASS END=171717597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:27:21:0,27,405:0,63,255:9,0 chr2 171785851 . A . PASS END=171785851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 171785852 . T . PASS END=171785861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 171785862 . G . PASS END=171785862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 171785863 . C . PASS END=171785884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 171785885 . G . PASS END=171785908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,282:0,27,255:9,0 chr2 171785909 . T . PASS END=171785913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:5,0 chr2 171786251 . C . PASS END=171786272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,131:0,12,131:4,0 chr2 171786273 . G . PASS END=171786283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr2 171786284 . C . PASS END=171786363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,133:0,12,133:6,0 chr2 171786364 . G . LowGQ END=171786364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:4,0 chr2 171786365 . C . PASS END=171786401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,139:0,12,139:5,0 chr2 171786402 . T . PASS END=171786409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,155:3,0 chr2 171793134 . C . PASS END=171793142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,119,1778:0,119,255:40,0 chr2 171804860 . G . PASS END=171804940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:53:0,120,1800:0,121,255:40,0 chr2 171806049 . A . PASS END=171806252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,105,1575:0,136,255:40,0 chr2 171806714 . G . PASS END=171806800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,120,1800:0,128,255:40,0 chr2 171807838 . T . PASS END=171807968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:39:0,93,1530:0,93,255:40,0 chr2 171811160 . C . PASS END=171811292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:95:50:0,95,1616:0,95,255:40,0 chr2 171812946 . G . PASS END=171813069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:93:45:0,93,1395:0,119,255:40,0 chr2 171818173 . G . PASS END=171818251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:42:0,96,1440:0,99,255:40,0 chr2 171818252 . A . PASS END=171818259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:37:0,104,1451:0,104,255:36,0 chr2 171819349 . G . PASS END=171819456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:83:33:0,83,1194:0,83,255:40,0 chr2 171822300 . G . PASS END=171822306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,499:0,42,255:16,0 chr2 171822307 . A . PASS END=171822307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 171822308 . C . PASS END=171822326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,598:0,41,255:19,0 chr2 171822327 . C . PASS END=171822351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr2 171822352 . T . PASS END=171822352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:20,0 chr2 171822353 . C . PASS END=171822368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:22,0 chr2 171822369 . A . PASS END=171822369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 171822370 . G . PASS END=171822377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 171822378 . C . PASS END=171822379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 171822380 . T . PASS END=171822384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 171822385 . C . PASS END=171822385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 171822386 . C . PASS END=171822402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,845:0,66,255:22,0 chr2 171822403 . C . PASS END=171822416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:18:0,44,675:0,44,255:19,0 chr2 171822417 . G . PASS END=171822417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr2 171822418 . C . PASS END=171822428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr2 171822429 . T . PASS END=171822429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 171822430 . G . PASS END=171822430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 171822431 . C . PASS END=171822432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 171822433 . G . PASS END=171822451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,540:0,32,255:13,0 chr2 171822452 . A . PASS END=171822452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:10,0 chr2 171822453 . G . PASS END=171822453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 171822454 . C . PASS END=171822465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:9:0,20,360:0,20,255:9,0 chr2 171822466 . C T, 74.10 PASS DP=9;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,9,0:1.000,0.000:9:0,4,0:0,5,0:24:112,27,0,333,27,333:255,27,0:0,0:7.4098e+01,2.4098e+01,1.6941e-02,3.2990e+02,5.8868e+01,3.3290e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,4:0,0,4,5 chr2 171822467 . G . PASS END=171822468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 171822469 . C . PASS END=171822472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 171822473 . G . PASS END=171822503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 171822504 . C . PASS END=171822510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 171822511 . C . PASS END=171822516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr2 171822517 . G . PASS END=171822525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,296:0,27,255:9,0 chr2 171822526 . G . PASS END=171822526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 171822527 . C . PASS END=171822528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 171822529 . C . PASS END=171822540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,374:0,30,255:12,0 chr2 171822541 . G . PASS END=171822573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,476:0,42,255:18,0 chr2 171822574 . C . PASS END=171822574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 171822575 . T . PASS END=171822575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 171822576 . C . PASS END=171822607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:23,0 chr2 171822608 . G . PASS END=171822608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 171822609 . C . PASS END=171822620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 171822621 . A . PASS END=171822621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 171822622 . T . PASS END=171822640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,821:0,66,255:23,0 chr2 171850290 . T . PASS END=171850296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,848:0,75,255:25,0 chr2 171850297 . G . PASS END=171850298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 171850299 . A . PASS END=171850299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 171850300 . A . PASS END=171850459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:28:0,81,1064:0,84,255:40,0 chr2 171850460 . T . PASS END=171850462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 171850463 . A . PASS END=171850466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,105,255:28,0 chr2 171853163 . C . PASS END=171853270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:48:0,120,1800:0,128,255:40,0 chr2 171854222 . C . PASS END=171854333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:95:44:0,95,1662:0,95,255:40,0 chr2 171862657 . C . PASS END=171862792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,114,1633:0,119,255:40,1 chr2 171862984 . C . PASS END=171863153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:40:0,102,1530:0,104,255:40,0 chr2 171863310 . G . PASS END=171863399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,173,255:40,0 chr2 171863482 . T . PASS END=171863573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:46:0,120,1800:0,134,255:40,0 chr2 171867883 . C . PASS END=171867964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:84:0,120,1800:0,236,255:40,0 chr2 171871361 . T . PASS END=171871458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:61:0,120,1800:0,162,255:40,0 chr2 171879634 . T . PASS END=171879635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 171879636 . A . PASS END=171879639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,954:0,70,255:26,0 chr2 171884849 . C . PASS END=171884915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,178,255:40,0 chr2 171902684 . A . PASS END=171902872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:33:0,99,1122:0,99,255:40,0 chr2 171906324 . T . PASS END=171906460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,105,1701:0,105,255:40,0 chr2 171906574 . C . PASS END=171906684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:73:0,120,1800:0,189,255:40,0 chr2 171910271 . C . PASS END=171910289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,162,255:40,0 chr2 171910290 . C . PASS END=171910290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,9:71:48:71:0,48,1599:0,48,255:40,0 chr2 171910291 . G . PASS END=171910363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,139,255:40,0 chr2 171911593 . C . PASS END=171911598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 171911599 . A . PASS END=171911599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr2 171911600 . A . PASS END=171911627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,62,255:26,0 chr2 171911628 . C . PASS END=171911645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1139:0,80,255:33,0 chr2 171911646 . A . PASS END=171911646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:30,0 chr2 171911647 . T . PASS END=171911651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1141:0,82,255:30,0 chr2 171911652 . A . PASS END=171911652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:38:33:0,38,1080:0,38,255:26,0 chr2 171911653 . T . PASS END=171911654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1161:0,80,255:26,0 chr2 171911655 . C . PASS END=171911663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,995:0,60,255:26,0 chr2 171911664 . A . PASS END=171911669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,71,255:22,0 chr2 171911670 . T . PASS END=171911671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:20:25:0,20,776:0,20,255:20,0 chr2 171911672 . T . PASS END=171911673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 171911674 . C . PASS END=171911674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,794:0,31,255:19,0 chr2 171911675 . G . PASS END=171911676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 171911677 . T . PASS END=171911677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:18,0 chr2 171911678 . C . PASS END=171911678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:17,0 chr2 171911679 . G . PASS END=171911679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,703:0,30,255:17,0 chr2 171911680 . A . PASS END=171911680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 171911681 . A . PASS END=171911681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:17,0 chr2 171911682 . C . PASS END=171911682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,53,255:16,0 chr2 171912981 . A . PASS END=171913070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:37:0,93,1395:0,96,255:40,0 chr2 171913071 . C . PASS END=171913076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr2 171914661 . T . PASS END=171914707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:55:0,120,1800:0,132,255:40,0 chr2 171916434 . C . PASS END=171916435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 171916436 . C . PASS END=171916445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 171916446 . G . PASS END=171916446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 171916447 . A . PASS END=171916457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 171916458 . A . PASS END=171916458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr2 171916459 . A . PASS END=171916461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 171916462 . G . PASS END=171916467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 171916468 . G . PASS END=171916470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr2 171916471 . C . PASS END=171916474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 171916475 . A . PASS END=171916489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,947:0,67,255:26,0 chr2 171916490 . G . PASS END=171916490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 171916491 . G . PASS END=171916496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:24,0 chr2 171917591 . C . PASS END=171917666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,151,255:40,2 chr2 171923352 . C . PASS END=171923393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:99:61:0,120,1800:0,139,255:40,0 chr2 171938198 . T . PASS END=171938218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1512:0,107,255:40,0 chr2 171939291 . C . PASS END=171939362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:73:0,120,1800:0,167,255:40,0 chr2 171974249 . T . PASS END=171974367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:40:0,99,1485:0,105,255:40,0 chr2 172016800 . C . PASS END=172016801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 172016802 . T . PASS END=172016834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 172016835 . A . PASS END=172016835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,200:0,4,200:6,0 chr2 172016836 . G . PASS END=172016866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr2 172016867 . G . PASS END=172016895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,405:0,33,255:13,0 chr2 172016896 . A . PASS END=172016896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 172016897 . T . PASS END=172016910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 172016911 . A . PASS END=172016911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,339:0,17,255:9,0 chr2 172016912 . A . PASS END=172016914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 172016915 . T . LowGQ END=172016915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:10,0 chr2 172016916 . C . PASS END=172016920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 172016921 . G . PASS END=172016938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 172180682 . T . PASS END=172180695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:25,0 chr2 172180696 . G . PASS END=172180733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:30:0,87,1088:0,90,255:40,0 chr2 172180734 . T . PASS END=172180770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,156,255:40,0 chr2 172180771 . A G, 256.30 PASS DP=70;MQ=164.01;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,36,0:0,34,0:206:294,209,0,2616,209,2616:255,210,0:0,0:2.5630e+02,2.0630e+02,0.0000e+00,4.5000e+02,2.4107e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,43,27:0,0,31,39 chr2 172180772 . G . PASS END=172180808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,174,255:40,0 chr2 172180809 . C . PASS END=172180869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:35:0,81,1215:0,105,255:40,0 chr2 172180870 . C . PASS END=172180872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 172182351 . C . PASS END=172182416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:61:0,116,1800:0,116,255:40,0 chr2 172182552 . C . PASS END=172182658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:90:39:0,90,1350:0,117,255:40,0 chr2 172187069 . C . PASS END=172187208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:88:37:0,88,1382:0,88,255:40,0 chr2 172188275 . C . PASS END=172188377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:62:0,120,1800:0,133,255:40,0 chr2 172193963 . T . PASS END=172194012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:81:0,120,1800:0,192,255:40,0 chr2 172195694 . C . PASS END=172196048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:85:33:0,85,1158:0,85,255:40,0 chr2 172196049 . T . PASS END=172196055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,79,255:22,0 chr2 172196056 . C . PASS END=172196061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:23:0,51,810:0,51,255:19,0 chr2 172196062 . T . PASS END=172196064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 172216932 . C . PASS END=172217023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:47:0,120,1800:0,139,255:40,0 chr2 172248553 . C . PASS END=172248707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:92:39:0,92,1362:0,92,255:40,0 chr2 172290845 . C . PASS END=172290845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 172290856 . C . PASS END=172290856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 172290866 . G . PASS END=172290866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 172290875 . C . PASS END=172290876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 172290882 . C . PASS END=172290882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 172290884 . C . PASS END=172290884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,194:0,15,194:5,0 chr2 172290890 . T . PASS END=172290890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 172290977 . G . PASS END=172290977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr2 172291079 . C . PASS END=172291079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 172291088 . A . PASS END=172291088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 172291089 . T . PASS END=172291096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,621:0,51,255:18,0 chr2 172291097 . A . PASS END=172291116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 172291117 . C . PASS END=172291118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,828:0,53,255:23,0 chr2 172291119 . G . PASS END=172291140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr2 172291141 . G . PASS END=172291148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,996:0,84,255:30,0 chr2 172291149 . T . PASS END=172291149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:29,0 chr2 172291150 . C . PASS END=172291150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 172291151 . T . PASS END=172291151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 172291152 . C . PASS END=172291153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 172291154 . C . PASS END=172291155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 172291156 . C . PASS END=172291156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 172291157 . G . PASS END=172291157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 172291158 . A . PASS END=172291162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:28,0 chr2 172291163 . G . PASS END=172291184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,923:0,64,255:26,0 chr2 172291185 . T . PASS END=172291185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr2 172291186 . G . PASS END=172291190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,856:0,72,255:24,0 chr2 172291191 . T . PASS END=172291191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 172291192 . C . PASS END=172291202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,870:0,72,255:24,0 chr2 172291203 . T . PASS END=172291213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 172291590 . T . PASS END=172291590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 172291593 . G . PASS END=172291615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1133:0,80,255:40,0 chr2 172291616 . C T, 43.16 PASS DP=42;MQ=250.00;MQRankSum=5.302;ReadPosRankSum=2.179;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,15,0:0.357,0.000:42:11,9,0:16,6,0:43:78,0,50,528,929,1457:255,0,255:26,0:4.3164e+01,2.3143e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,13,8,7:16,11,8,7 chr2 172291617 . T . PASS END=172291653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,104,1488:0,104,255:40,0 chr2 172291654 . G . PASS END=172291696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:38:0,97,1343:0,97,255:40,0 chr2 172291711 . A . PASS END=172291711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 172300033 . T . PASS END=172300123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:64:0,120,1800:0,173,255:40,0 chr2 172305176 . T . LowGQ END=172305176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,7:22:0:22:0,0,288:205,0,255:21,0 chr2 172305191 . G . PASS END=172305192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:23:0,67,892:0,67,255:26,0 chr2 172305193 . A . PASS END=172305196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 172305197 . A . PASS END=172305197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,940:0,63,255:29,0 chr2 172305198 . T . PASS END=172305221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:32:0,93,1305:0,96,255:40,0 chr2 172305222 . A . PASS END=172305327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,105,1575:0,122,255:40,0 chr2 172306381 . T . PASS END=172306381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 172306389 . A . PASS END=172306467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,1025:0,84,255:40,0 chr2 172309634 . G . PASS END=172309723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,154,255:40,0 chr2 172314481 . A . PASS END=172314585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,103,1505:0,103,255:40,2 chr2 172314882 . T . PASS END=172314987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:37:0,94,1282:0,94,255:40,0 chr2 172316937 . A . PASS END=172317009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:90:44:0,90,1350:0,96,255:40,0 chr2 172325398 . A . PASS END=172325488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,92,255:40,0 chr2 172325489 . G . PASS END=172325512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,922:0,62,255:26,0 chr2 172325513 . T . PASS END=172325513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 172325514 . A . PASS END=172325518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 172325519 . T . PASS END=172325538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:17:0,45,675:0,51,255:19,0 chr2 172325539 . T . PASS END=172325540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr2 172325829 . T . PASS END=172325835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,623:0,41,255:19,0 chr2 172325836 . C . PASS END=172325840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:24,0 chr2 172325841 . A . PASS END=172325841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:23,0 chr2 172325842 . T . PASS END=172325849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr2 172325850 . G . PASS END=172325852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 172325853 . C . PASS END=172325854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 172325855 . C . PASS END=172325856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 172325857 . T . PASS END=172325857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 172325858 . T . PASS END=172325860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 172325861 . T . PASS END=172325861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr2 172325862 . T . PASS END=172325867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:30,0 chr2 172325868 . A . PASS END=172325868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 172325869 . T . PASS END=172325919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1067:0,85,255:33,0 chr2 172325920 . T . PASS END=172325953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:26,0 chr2 172325954 . G . PASS END=172325966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:19,0 chr2 172329380 . G . PASS END=172329420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,161,255:40,0 chr2 172329421 . A . PASS END=172329457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,141,255:40,0 chr2 172329458 . G T, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.236;ReadPosRankSum=-0.418;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,27,0:0.509,0.000:53:12,14,0:14,13,0:48:85,0,50,965,900,1866:255,0,255:23,0:5.0000e+01,6.5492e-05,5.2959e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,17,7,20:13,13,12,15 chr2 172329459 . A . PASS END=172329465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,114,1710:0,114,255:40,0 chr2 172330374 . A . PASS END=172330374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 172330376 . G . PASS END=172330392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr2 172330393 . A G, 50.00 PASS DP=53;MQ=250.00;MQRankSum=6.227;ReadPosRankSum=4.499;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,28,0:0.528,0.000:53:8,7,0:17,21,0:48:85,0,50,942,886,1828:255,0,255:24,0:5.0000e+01,6.6269e-05,5.2790e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,13,15:12,13,16,12 chr2 172330394 . G . PASS END=172330430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:54:0,120,1800:0,129,255:40,0 chr2 172330431 . A . PASS END=172330485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:38:0,84,1363:0,84,255:40,0 chr2 172330491 . T . PASS END=172330491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:38:0,87,1305:0,114,255:29,0 chr2 172330498 . A . PASS END=172330498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 172333370 . A . PASS END=172333460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:69:0,120,1800:0,161,255:40,1 chr2 172334491 . T . PASS END=172334491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 172334497 . A . PASS END=172334580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,134,255:40,0 chr2 172334584 . T . PASS END=172334584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 172334586 . G . PASS END=172334586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 172336548 . A . PASS END=172336578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,137,255:40,0 chr2 172336579 . T . PASS END=172336703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,102,1530:0,115,255:40,0 chr2 172336708 . G . PASS END=172336708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:45:0,90,1350:0,135,255:30,0 chr2 172336717 . G . PASS END=172336717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 172337484 . A . PASS END=172337624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:37:0,89,1337:0,89,255:40,0 chr2 172337672 . A . PASS END=172337672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 172337729 . A . PASS END=172337729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 172337750 . A . PASS END=172337750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 172337777 . C . PASS END=172337777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 172337835 . C . PASS END=172337835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 172338047 . T . PASS END=172338047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr2 172338056 . C . PASS END=172338056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 172338432 . T . PASS END=172338432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 172338488 . A . PASS END=172338488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 172338500 . G . PASS END=172338500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 172338550 . G . PASS END=172338550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 172338744 . A . PASS END=172338744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 172338748 . G . PASS END=172338748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 172338789 . C . PASS END=172338789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 172338872 . A . LowGQ END=172338872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:0:50:0,0,1482:28,0,255:40,6 chr2 172338994 . C . PASS END=172338994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 172339108 . T . PASS END=172339108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 172339155 . T . PASS END=172339155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1215:0,98,255:26,0 chr2 172339164 . C . PASS END=172339164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 172339181 . T . PASS END=172339181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1219:0,99,255:33,0 chr2 172339316 . G . PASS END=172339316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 172339371 . C . PASS END=172339371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 172339465 . G . PASS END=172339465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 172339690 . A . PASS END=172339690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 172339737 . C . PASS END=172339737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:22,0 chr2 172339826 . A . PASS END=172339826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 172339865 . T . PASS END=172339865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 172339916 . G . PASS END=172339916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 172339927 . G . PASS END=172339927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 172339936 . G . PASS END=172339936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 172339942 . C . PASS END=172339942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 172340004 . A . PASS END=172340004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 172340159 . C . PASS END=172340159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1390:0,81,255:37,2 chr2 172340247 . T . PASS END=172340247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 172340371 . C . PASS END=172340371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 172340567 . C . PASS END=172340567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 172340571 . A . PASS END=172340571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 172340588 . G . PASS END=172340588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 172340595 . A . PASS END=172340595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 172340600 . A . PASS END=172340600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 172340630 . C . PASS END=172340630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 172340646 . A . PASS END=172340646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr2 172340731 . A . PASS END=172340731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 172340794 . A . PASS END=172340794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,117,1755:0,135,255:39,0 chr2 172341077 . A . PASS END=172341077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr2 172341175 . C . PASS END=172341175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 172341435 . A . PASS END=172341435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 172341459 . A . PASS END=172341459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,255,255:40,0 chr2 172341504 . G . PASS END=172341504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr2 172341570 . G . PASS END=172341570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 172347258 . A . PASS END=172347324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:95:43:0,95,1800:0,95,255:40,0 chr2 172378783 . A . PASS END=172378785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 172378786 . C . PASS END=172378801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,84,255:26,0 chr2 172379056 . A . PASS END=172379068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr2 172379069 . G . PASS END=172379069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 172379070 . C . PASS END=172379080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr2 172379081 . T . PASS END=172379081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 172379082 . C . PASS END=172379089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr2 172379090 . T . PASS END=172379090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 172379091 . G . PASS END=172379095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr2 172379096 . G . PASS END=172379100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 172379101 . G . PASS END=172379101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 172379102 . C . PASS END=172379104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 172379105 . T . PASS END=172379105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 172379106 . G . PASS END=172379158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,825:0,61,255:25,0 chr2 172379159 . G . PASS END=172379159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 172379160 . A . PASS END=172379167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,801:0,64,255:26,0 chr2 172379168 . T . PASS END=172379179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:29,0 chr2 172379180 . G . PASS END=172379183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 172379184 . C . PASS END=172379184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 172379185 . G . PASS END=172379190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:28:0,74,1078:0,74,255:26,0 chr2 172379191 . G . PASS END=172379200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,991:0,81,255:27,0 chr2 172379201 . G . PASS END=172379201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 172379202 . G . PASS END=172379203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 172379204 . A . PASS END=172379216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:26,0 chr2 172379217 . G . PASS END=172379217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:19,0 chr2 172379218 . G . PASS END=172379221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 172379222 . C . PASS END=172379248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,690:0,44,255:19,0 chr2 172379747 . A . PASS END=172379747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 172379748 . T . PASS END=172379748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 172379749 . G . PASS END=172379757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 172379758 . A . PASS END=172379758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 172379759 . A . PASS END=172379765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 172379766 . G . PASS END=172379780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 172379781 . G A, 89.13 PASS DP=14;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,14,0:1.000,0.000:14:0,7,0:0,7,0:39:127,42,0,535,42,535:255,42,0:0,0:8.9134e+01,3.9134e+01,5.3044e-04,4.5000e+02,7.3904e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,7:0,0,8,6 chr2 172379782 . G . PASS END=172379792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 172379793 . T . PASS END=172379793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 172379794 . G . PASS END=172379798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 172379799 . T . PASS END=172379813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 172379814 . C . PASS END=172379818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 172379819 . C . PASS END=172379822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:9:12:0,9,135:0,36,255:3,0 chr2 172398095 . C . PASS END=172398101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:19,0 chr2 172398102 . C . PASS END=172398110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:25,0 chr2 172398111 . A . PASS END=172398244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:27:0,81,1016:0,81,255:40,0 chr2 172398245 . A . PASS END=172398245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:68:56:0,68,1597:0,68,255:40,0 chr2 172398246 . T . PASS END=172398273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:40:0,87,1480:0,87,255:40,0 chr2 172398274 . C . PASS END=172398289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:37:0,90,1305:0,90,255:36,0 chr2 172398290 . G . PASS END=172398290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:29,0 chr2 172398291 . C . PASS END=172398301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1215:0,88,255:31,0 chr2 172398302 . A . PASS END=172398303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:33:0,69,1035:0,83,255:25,0 chr2 172409856 . C . PASS END=172409972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1215:0,86,255:40,0 chr2 172409973 . G . PASS END=172409973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 172409974 . C . PASS END=172409978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:28,0 chr2 172409979 . A . PASS END=172410010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,815:0,66,255:25,0 chr2 172411034 . G . PASS END=172411038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 172411039 . A . PASS END=172411122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:27:0,80,919:0,80,255:40,0 chr2 172411123 . T . PASS END=172411123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1667:0,64,255:40,0 chr2 172411124 . T . PASS END=172411128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,100,1676:0,100,255:40,0 chr2 172411129 . T . PASS END=172411129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1659:0,72,255:38,0 chr2 172411130 . A . PASS END=172411235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:44:0,80,1558:0,80,255:40,0 chr2 172411236 . G . PASS END=172411272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,114,1710:0,124,255:40,0 chr2 172411273 . G A, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=3.811;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,23,0:0.535,0.000:43:12,13,0:8,10,0:48:85,0,50,807,707,1514:255,0,255:19,0:5.0000e+01,6.7304e-05,5.2587e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,9,7,16:13,7,15,8 chr2 172411274 . T . PASS END=172411310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:38:0,87,1305:0,104,255:40,0 chr2 172411311 . G . PASS END=172411314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,99,255:28,0 chr2 172411315 . C . PASS END=172411321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:24,0 chr2 172411322 . G . PASS END=172411337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:18:0,48,720:0,54,255:19,0 chr2 172546666 . A . PASS END=172546760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:48:0,88,1437:0,88,255:40,0 chr2 172546761 . G . PASS END=172546762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1408:0,64,255:40,4 chr2 172546763 . A . PASS END=172546773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:46:0,120,1800:0,121,255:40,0 chr2 172549287 . A . PASS END=172549404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:39:0,82,1396:0,82,255:40,2 chr2 172563057 . T . PASS END=172563074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:98:0,120,1800:0,246,255:40,0 chr2 172563743 . C . PASS END=172563761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,599:0,41,255:19,0 chr2 172563762 . A . PASS END=172563762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 172563763 . G . PASS END=172563766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 172563767 . C . PASS END=172563778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,939:0,69,255:26,0 chr2 172563779 . G . PASS END=172563779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 172563780 . T . PASS END=172563780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 172563781 . C . PASS END=172563862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1163:0,80,255:36,0 chr2 172563863 . C . PASS END=172563863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:27,0 chr2 172563864 . T . PASS END=172563868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:28,0 chr2 172563869 . A . PASS END=172563870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:29:0,60,986:0,60,255:26,0 chr2 172563871 . G . PASS END=172563871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 172563872 . G . PASS END=172563872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1078:0,60,255:28,0 chr2 172563873 . C . PASS END=172563873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 172563874 . G . PASS END=172563874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 172563875 . C . PASS END=172563878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 172563879 . G . PASS END=172563884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:66:29:0,66,990:0,71,255:23,0 chr2 172563885 . T . PASS END=172563887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,990:0,67,255:22,0 chr2 172569277 . G . PASS END=172569336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:58:0,120,1800:0,174,255:40,0 chr2 172571838 . A . PASS END=172571940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:36:0,84,1330:0,84,255:40,0 chr2 172571941 . C . PASS END=172571942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,117,255:25,0 chr2 172571943 . A . PASS END=172571951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,95,255:28,0 chr2 172571952 . A . PASS END=172571953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 172582128 . A . PASS END=172582128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,852:0,36,255:23,0 chr2 172582129 . T . PASS END=172582129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:22,0 chr2 172582130 . G . PASS END=172582130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:27:25:0,27,707:0,27,255:22,0 chr2 172582131 . A . PASS END=172582131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,795:0,36,255:22,0 chr2 172582132 . A . PASS END=172582133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:20:25:0,20,779:0,20,255:24,0 chr2 172582134 . A . PASS END=172582134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:23,0 chr2 172582135 . G . PASS END=172582135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,878:0,29,255:25,0 chr2 172582136 . G . PASS END=172582137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:31:29:0,31,834:0,31,255:26,0 chr2 172582138 . A . PASS END=172582138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1045:0,60,255:28,0 chr2 172582139 . G . PASS END=172582139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,947:0,57,255:29,0 chr2 172582140 . A . PASS END=172582140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1115:0,80,255:30,0 chr2 172582141 . T . PASS END=172582141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr2 172582142 . G . PASS END=172582143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:63:32:0,63,993:0,63,255:32,0 chr2 172582144 . T . PASS END=172582144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 172582145 . G . PASS END=172582145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,985:0,55,255:31,0 chr2 172582146 . A . PASS END=172582150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1246:0,81,255:38,0 chr2 172582151 . G . PASS END=172582151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1343:0,73,255:37,0 chr2 172582152 . T . PASS END=172582155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:89:40:0,89,1295:0,89,255:40,0 chr2 172582156 . T . PASS END=172582156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:65:44:0,65,1267:0,65,255:36,0 chr2 172582157 . C . PASS END=172582158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:45:0,105,1667:0,105,255:40,0 chr2 172582159 . T . PASS END=172582224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1339:0,81,255:40,0 chr2 172582429 . C . PASS END=172582591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:49:0,111,1665:0,135,255:40,0 chr2 172582704 . A . PASS END=172582803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:53:0,114,1800:0,114,255:40,2 chr2 172583301 . T . PASS END=172583414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1402:0,87,255:40,0 chr2 172583415 . T . PASS END=172583415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 172583416 . T . PASS END=172583426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,95,255:36,0 chr2 172584331 . T . PASS END=172584331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 172584332 . C . PASS END=172584477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:27:0,81,950:0,81,255:40,0 chr2 172584815 . C . PASS END=172584928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:38:0,111,1665:0,114,255:40,0 chr2 172585227 . G . PASS END=172585235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 172585236 . G . PASS END=172585240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 172585241 . G . PASS END=172585241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 172585242 . G . PASS END=172585249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 172585250 . A . PASS END=172585263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 172585264 . T . PASS END=172585264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,833:0,34,255:25,0 chr2 172585265 . A . PASS END=172585279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,953:0,65,255:26,0 chr2 172585280 . G . PASS END=172585281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 172585282 . C . PASS END=172585296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:26,0 chr2 172585297 . A . PASS END=172585297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:19,0 chr2 172585298 . T . PASS END=172585303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 172585304 . C . PASS END=172585305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 172585306 . A . PASS END=172585309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:22,0 chr2 172585310 . T . PASS END=172585310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 172585311 . G . PASS END=172585327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 172585328 . A . PASS END=172585334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:19,0 chr2 172585335 . G . PASS END=172585356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:10:0,30,365:0,30,255:13,0 chr2 172585357 . G . PASS END=172585360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 172586219 . C . PASS END=172586363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:31:0,90,1186:0,93,255:40,0 chr2 172600559 . A . PASS END=172600660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:34:0,90,1350:0,95,255:40,0 chr2 172600661 . G . PASS END=172600678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:27:0,63,945:0,81,255:25,0 chr2 172600679 . A . PASS END=172600679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 172600680 . A . PASS END=172600680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr2 172600681 . T . PASS END=172600687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:24,0 chr2 172600688 . A . PASS END=172600688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:21,0 chr2 172600689 . A . PASS END=172600689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 172600690 . T . PASS END=172600699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:47:24:0,47,720:0,47,255:19,0 chr2 172602312 . G . PASS END=172602316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1394:0,98,255:38,0 chr2 172602317 . A . PASS END=172602317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr2 172602318 . A . PASS END=172602435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:33:0,81,1215:0,92,255:40,0 chr2 172602436 . A . PASS END=172602437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:21,0 chr2 172604286 . C . PASS END=172604289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:24,0 chr2 172604290 . T . PASS END=172604292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 172604293 . C . PASS END=172604293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:28,0 chr2 172604294 . T . PASS END=172604304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1064:0,87,255:29,0 chr2 172604305 . A . PASS END=172604305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 172604306 . T . PASS END=172604399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:31:0,86,1217:0,86,255:40,0 chr2 172640790 . G . PASS END=172640790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 172641784 . T . PASS END=172641799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:33,0 chr2 172641800 . A . PASS END=172641800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:31,0 chr2 172641801 . C . PASS END=172641954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1202:0,84,255:40,0 chr2 172641955 . C . PASS END=172641955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr2 172641956 . T . PASS END=172641959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 172641960 . G . PASS END=172641975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,67,255:26,0 chr2 172641976 . A . PASS END=172641978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:57:25:0,57,855:0,58,255:19,0 chr2 172641979 . G . PASS END=172641981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 172641982 . T . PASS END=172641982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,671:0,55,255:19,0 chr2 172641983 . T . PASS END=172641985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 172644081 . A . PASS END=172644171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,103,1396:0,103,255:40,0 chr2 172644299 . C . PASS END=172644409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:35:0,84,1260:0,100,255:40,0 chr2 172644410 . T . PASS END=172644410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1241:0,72,255:27,0 chr2 172644411 . T . PASS END=172644415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 172644416 . T . PASS END=172644416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:27,0 chr2 172644417 . G . PASS END=172644418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 172644419 . T . PASS END=172644420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 172644421 . A . PASS END=172644422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 172644423 . A . PASS END=172644440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,74,255:24,0 chr2 172644441 . A . PASS END=172644444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 172644445 . G . PASS END=172644454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr2 172644455 . C . PASS END=172644457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:18,0 chr2 172647961 . C . PASS END=172648099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:39:0,110,1543:0,110,255:40,0 chr2 172650132 . C . PASS END=172650132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 172650137 . C . PASS END=172650273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:34:0,87,1219:0,88,255:40,0 chr2 172650274 . C . PASS END=172650277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:71:34:0,71,1080:0,71,255:25,0 chr2 172650280 . G . PASS END=172650280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 172666116 . A . PASS END=172666196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,115,1755:0,115,255:40,0 chr2 172666731 . T . PASS END=172666731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 172666734 . A . PASS END=172666786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:55:0,120,1800:0,134,255:40,0 chr2 172669849 . C . PASS END=172669984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1305:0,87,255:40,0 chr2 172669985 . A . PASS END=172669995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:30:0,60,900:0,90,255:25,0 chr2 172669996 . T . PASS END=172669996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:31:27:0,31,828:0,31,255:16,0 chr2 172669997 . G . PASS END=172670007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,720:0,47,255:17,0 chr2 172671631 . C . PASS END=172671712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:43:0,96,1530:0,96,255:40,0 chr2 172683304 . A . PASS END=172683304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 172683308 . C . PASS END=172683392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:35:0,89,1289:0,89,255:40,0 chr2 172690465 . A . PASS END=172690465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 172690473 . C . PASS END=172690566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,102,1412:0,102,255:40,0 chr2 172691237 . C . PASS END=172691259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,106,1429:0,106,255:40,0 chr2 172691260 . C T, 42.38 PASS DP=46;MQ=250.00;MQRankSum=5.489;ReadPosRankSum=0.154;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,16,0:0.356,0.000:45:17,9,0:12,7,0:42:77,0,50,489,1000,1489:255,0,255:28,0:4.2384e+01,2.7259e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,11,7,9:14,15,4,12 chr2 172691261 . T . PASS END=172691297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:80:43:0,80,1582:0,80,255:40,0 chr2 172691298 . C . PASS END=172691375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,99,1485:0,108,255:40,0 chr2 172693631 . T . PASS END=172693742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:37:0,102,1323:0,102,255:40,0 chr2 172693743 . G . PASS END=172693777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,117,1755:0,140,255:40,0 chr2 172700879 . C . PASS END=172701018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:39:0,99,1397:0,101,255:40,0 chr2 172701020 . T . PASS END=172701020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 172702279 . T . PASS END=172702368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,147,255:40,0 chr2 172704683 . C . PASS END=172704771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:28:0,81,1215:0,83,255:40,0 chr2 172704772 . G . PASS END=172704783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 172709178 . C . PASS END=172709198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,184,255:40,0 chr2 172712344 . C . PASS END=172712442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:50:0,120,1800:0,129,255:40,0 chr2 172712443 . C . PASS END=172712459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,169,255:40,0 chr2 172725191 . C . PASS END=172725263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:32:0,93,1172:0,96,255:40,0 chr2 172725264 . G . PASS END=172725300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,120,1800:0,139,255:40,0 chr2 172725301 . A G, 203.51 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,25,0:0,27,0:154:241,157,0,2016,157,2016:255,157,0:0,0:2.0351e+02,1.5351e+02,0.0000e+00,4.5000e+02,1.8828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,26:0,0,27,25 chr2 172725302 . T . PASS END=172725319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,99,1485:0,117,255:40,0 chr2 172725320 . T . PASS END=172725333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:26:0,72,1080:0,78,255:26,0 chr2 172725339 . A . PASS END=172725339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 172749712 . T . PASS END=172749712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 172749715 . C . PASS END=172749768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:60:0,120,1800:0,155,255:40,0 chr2 172750713 . C . PASS END=172750724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:33,0 chr2 172750779 . G . PASS END=172750779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr2 172779011 . A . PASS END=172779017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:33,0 chr2 172782047 . G . PASS END=172782151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:64:0,120,1800:0,132,255:40,0 chr2 172803228 . T . PASS END=172803303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:40:0,84,1260:0,119,255:40,1 chr2 172809399 . T . PASS END=172809399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 172809400 . G . PASS END=172809400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr2 172809401 . A . PASS END=172809519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:34:0,84,1134:0,85,255:40,0 chr2 172821859 . G . PASS END=172821991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:35:0,81,1215:0,91,255:40,0 chr2 172821992 . T . PASS END=172821993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 172821994 . C . PASS END=172821994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 172821995 . T . PASS END=172822020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr2 172822021 . A . PASS END=172822021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 172822022 . C . PASS END=172822027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 172822028 . A . PASS END=172822028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:18,0 chr2 172822029 . G . PASS END=172822029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 172822030 . A . PASS END=172822030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:17,0 chr2 172822031 . T . PASS END=172822035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:21,0 chr2 172822036 . A . PASS END=172822038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,61,255:19,0 chr2 172822308 . G . PASS END=172822429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:60:0,120,1800:0,173,255:40,0 chr2 172822930 . A . PASS END=172822932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1321:0,108,255:36,0 chr2 172822933 . T . PASS END=172822933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr2 172822934 . G . PASS END=172823031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:98:36:0,98,1336:0,98,255:40,0 chr2 172823032 . A . PASS END=172823032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:34,0 chr2 172823033 . A . PASS END=172823034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:32,0 chr2 172823364 . T . PASS END=172823461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:84:43:0,84,1260:0,97,255:40,0 chr2 172823462 . A . PASS END=172823470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:37:0,75,1125:0,111,255:26,0 chr2 172841096 . C . PASS END=172841247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:33:0,85,1127:0,85,255:40,0 chr2 172844160 . C . PASS END=172844267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:30:0,87,1166:0,90,255:40,0 chr2 172844268 . C . PASS END=172844276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:26,0 chr2 172848099 . A . PASS END=172848266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:47:0,104,1575:0,104,255:40,0 chr2 172864877 . A . PASS END=172864882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:19,0 chr2 172864883 . G . PASS END=172864884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 172864885 . G . PASS END=172864888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 172864889 . A . PASS END=172864889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,657:0,16,255:18,0 chr2 172864890 . G . PASS END=172864890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 172864891 . T . PASS END=172864891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 172864892 . G . PASS END=172864908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:23,0 chr2 172864909 . C . PASS END=172864909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 172864910 . C . PASS END=172864916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 172917060 . A . PASS END=172917075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:48:0,111,1720:0,111,255:40,0 chr2 172917076 . C T, 48.92 PASS DP=54;MQ=250.00;MQRankSum=6.258;ReadPosRankSum=-0.131;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,24,0:0.444,0.000:54:11,11,0:19,13,0:47:84,0,50,850,1065,1915:255,0,255:28,0:4.8925e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,10,16,8:13,17,13,11 chr2 172917077 . G . PASS END=172917113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,139,255:40,0 chr2 172917114 . G . PASS END=172917147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,111,1800:0,111,255:40,2 chr2 172926226 . G . PASS END=172926383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,99,1488:0,99,255:40,0 chr2 172928439 . C . PASS END=172928439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 172928440 . A . PASS END=172928440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 172928441 . C . PASS END=172928447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:16,0 chr2 172928448 . A . PASS END=172928462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:26,0 chr2 172928463 . A . PASS END=172928482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,984:0,81,255:38,0 chr2 172928483 . C . PASS END=172928483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr2 172928484 . T . PASS END=172928570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1211:0,86,255:40,0 chr2 172928571 . G . PASS END=172928571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr2 172928572 . C . PASS END=172928588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1186:0,83,255:34,0 chr2 172930332 . G . PASS END=172930476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:35:0,81,1215:0,92,255:40,0 chr2 172930477 . A . PASS END=172930480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr2 172930992 . T . PASS END=172931034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:78:0,120,1800:0,217,255:40,0 chr2 172935635 . G . PASS END=172935798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:98:41:0,98,1485:0,98,255:40,0 chr2 172942525 . C . PASS END=172942622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,150,255:40,0 chr2 172943943 . C . PASS END=172943990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:40:0,96,1440:0,104,255:40,0 chr2 172944856 . A . PASS END=172944856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:29,0 chr2 172944857 . G . PASS END=172945034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:32:0,96,1188:0,96,255:40,0 chr2 172945056 . G . PASS END=172945074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1324:0,92,255:34,0 chr2 172945075 . A . PASS END=172945109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr2 172945110 . G . PASS END=172945116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,782:0,50,255:19,0 chr2 172945117 . C . PASS END=172945118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 172945119 . A . PASS END=172945134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 172950406 . A . PASS END=172950418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr2 172950419 . C . PASS END=172950431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr2 172950432 . T . PASS END=172950432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 172950433 . C . PASS END=172950495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:23:0,64,856:0,64,255:26,0 chr2 172950496 . T . PASS END=172950496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 172950497 . C . PASS END=172950530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,864:0,75,255:26,0 chr2 172950531 . G . PASS END=172950533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 172950534 . C . PASS END=172950555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:24:0,60,856:0,64,255:26,0 chr2 172950556 . T . PASS END=172950558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 172950559 . C . PASS END=172950577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,1008:0,68,255:26,0 chr2 172950578 . G . PASS END=172950597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,950:0,84,255:28,0 chr2 172950598 . C . PASS END=172950598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 172950599 . G . PASS END=172950602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 172950603 . G . PASS END=172950611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1030:0,68,255:26,0 chr2 172950612 . C . PASS END=172950613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 172950614 . C . PASS END=172950618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1061:0,71,255:27,0 chr2 172950619 . G . PASS END=172950619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr2 172950620 . T . PASS END=172950632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 172950633 . C . PASS END=172950634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 172950635 . G . PASS END=172950651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1072:0,84,255:29,0 chr2 172950652 . T . PASS END=172950665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:26:0,63,945:0,77,255:26,0 chr2 172950666 . G . PASS END=172950682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:16:0,42,630:0,48,255:16,0 chr2 172950683 . G . PASS END=172950683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 172950684 . C . PASS END=172950691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr2 172950692 . T . PASS END=172950706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,459:0,39,255:13,0 chr2 172950707 . T . PASS END=172950707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 172950708 . G . PASS END=172950716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 172950717 . A . PASS END=172950718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr2 172951382 . G . PASS END=172951384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 172951385 . C . PASS END=172951385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 172951386 . G . PASS END=172951397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:25,0 chr2 172951398 . G . PASS END=172951400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 172951401 . C . PASS END=172951401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 172951402 . A . PASS END=172951403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 172951404 . G . PASS END=172951404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 172951405 . G . PASS END=172951405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 172951406 . T . PASS END=172951406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr2 172951407 . G . PASS END=172951441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1219:0,86,255:35,0 chr2 172951442 . G . PASS END=172951442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:33,0 chr2 172951443 . A . PASS END=172951506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:32:0,82,943:0,82,255:38,0 chr2 172951507 . T . PASS END=172951507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 172951508 . T . PASS END=172951515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 172951516 . A . PASS END=172951516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:28,0 chr2 172951517 . C . PASS END=172951522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:29,0 chr2 172951523 . A . PASS END=172951562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,864:0,61,255:26,0 chr2 172951563 . G . PASS END=172951563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 172951564 . G . PASS END=172951564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:17,0 chr2 172951565 . G . PASS END=172951582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:43:19:0,43,644:0,43,255:19,0 chr2 172952731 . G . PASS END=172952732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 172952733 . C . PASS END=172952733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 172952734 . A . PASS END=172952740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:62:21:0,62,545:0,62,255:21,0 chr2 172952741 . G . PASS END=172952741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 172952742 . G . PASS END=172952753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:21,0 chr2 172952754 . G . PASS END=172952754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 172952755 . C . PASS END=172952755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 172952756 . G . PASS END=172952756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 172952757 . A . PASS END=172952760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,845:0,69,255:23,0 chr2 172952761 . A . PASS END=172952762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,812:0,53,255:21,0 chr2 172952763 . G . PASS END=172952790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,886:0,61,255:25,0 chr2 172952791 . G . PASS END=172952791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 172952792 . C . PASS END=172952794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,856:0,75,255:25,0 chr2 172952795 . C . PASS END=172952795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:25,0 chr2 172952796 . T . PASS END=172952796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 172952797 . C . PASS END=172952800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr2 172952801 . A . PASS END=172952801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 172952802 . G . PASS END=172952803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 172952804 . G . PASS END=172952804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 172952805 . T . PASS END=172952805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 172952806 . A . PASS END=172952815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1109:0,90,255:30,0 chr2 172952816 . C . PASS END=172952816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 172952817 . C . PASS END=172952818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 172952819 . A . PASS END=172952825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr2 172952826 . G . PASS END=172952830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:30,0 chr2 172952831 . T . PASS END=172952831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 172952832 . G . PASS END=172952832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 172952833 . T . PASS END=172952833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 172952834 . C . PASS END=172952837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 172952838 . T . PASS END=172952840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 172952841 . C . PASS END=172952846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 172952847 . A . PASS END=172952867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr2 172952868 . C . PASS END=172952871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 172952872 . A . PASS END=172952872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 172952873 . A . PASS END=172952874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 172952875 . T . PASS END=172952875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:26,0 chr2 172952876 . C . PASS END=172952880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 172952881 . T . PASS END=172952901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr2 172952902 . A . PASS END=172952902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 172952903 . A . PASS END=172952943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:25,0 chr2 172952944 . T . PASS END=172952971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 172952972 . C . PASS END=172952972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 172952973 . C . PASS END=172952985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 172965271 . T . PASS END=172965274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 172965275 . A . PASS END=172965275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,282:0,16,255:9,0 chr2 172965276 . A . PASS END=172965278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 172965279 . T . PASS END=172965281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 172965282 . T . PASS END=172965287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 172965288 . C . PASS END=172965291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 172965292 . C . PASS END=172965310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:12,0 chr2 172965311 . C . PASS END=172965311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 172965312 . C . PASS END=172965315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 172965316 . A . PASS END=172965316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 172965317 . T . PASS END=172965318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 172965319 . G . PASS END=172965405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:40:14:0,40,498:0,40,255:19,0 chr2 172965406 . G . PASS END=172965429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,540:0,32,255:13,0 chr2 172965430 . A . PASS END=172965430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:11,0 chr2 172965431 . A . PASS END=172965455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 172965456 . T . PASS END=172965459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 172965460 . G . PASS END=172965465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 172965466 . G . PASS END=172965466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 172965467 . C . PASS END=172965467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 172965468 . T . PASS END=172965468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 172965469 . G . PASS END=172965477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 172965478 . G . PASS END=172965488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 172965489 . T . PASS END=172965489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr2 172965490 . G . PASS END=172965501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr2 172965502 . G . PASS END=172965502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:7,0 chr2 172965503 . C . PASS END=172965520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 172965521 . G . PASS END=172965524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 172965525 . C . PASS END=172965530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr2 172965531 . A . LowGQ END=172965531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,227:9,0,236:8,0 chr2 172965532 . G . PASS END=172965571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:13,0 chr2 172965572 . G . PASS END=172965578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 172965579 . A . PASS END=172965579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,457:0,15,255:13,0 chr2 172965580 . A . PASS END=172965584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 172965585 . T . PASS END=172965586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 172965587 . G . PASS END=172965592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 172965593 . G . PASS END=172965594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 172965595 . G . PASS END=172965598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 172965599 . T . PASS END=172965599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 172965600 . G . PASS END=172965618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,546:0,45,255:17,0 chr2 172965619 . A . PASS END=172965619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 172965620 . C . PASS END=172965668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,529:0,48,255:17,0 chr2 172965669 . T . PASS END=172965669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 172965670 . G . PASS END=172965672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 172966121 . C . PASS END=172966162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,815:0,69,255:26,0 chr2 172966163 . C . PASS END=172966166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 172966167 . C . PASS END=172966173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 172966174 . A . PASS END=172966174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:25,0 chr2 172966175 . G . PASS END=172966194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 172966195 . T . PASS END=172966195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:19,0 chr2 172966196 . C . PASS END=172966197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 172966198 . G . PASS END=172966199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 172966200 . G . PASS END=172966200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 172966201 . T . PASS END=172966299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,590:0,40,255:19,0 chr2 172966300 . A . PASS END=172966322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr2 172966323 . T . PASS END=172966330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 172966331 . C . PASS END=172966331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 172966332 . T . PASS END=172966349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,423:0,42,255:15,0 chr2 172966350 . A . PASS END=172966350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 172966351 . T . PASS END=172966352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 172966353 . T . PASS END=172966353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 172966354 . C . PASS END=172966363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 172966364 . G . PASS END=172966374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 172966867 . C . PASS END=172967029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1210:0,83,255:40,1 chr2 172967030 . G . PASS END=172967030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:61:42:0,61,1402:0,61,255:39,1 chr2 172967031 . C . PASS END=172967088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:38:0,88,1418:0,88,255:40,0 chr2 172967089 . T . PASS END=172967089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:33,0 chr2 172967090 . G . PASS END=172967127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,92,255:35,0 chr2 172967128 . G . PASS END=172967128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:28,2 chr2 172967129 . G . PASS END=172967130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:37:0,42,1265:0,42,255:28,2 chr2 172967131 . T . PASS END=172967131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:38:36:0,38,1127:0,38,255:28,2 chr2 172967132 . G . PASS END=172967132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:29,0 chr2 172967133 . C . PASS END=172967143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr2 172967144 . G . PASS END=172967152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr2 172967153 . A . PASS END=172967153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:21,0 chr2 172967154 . C . PASS END=172967164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 172967165 . G . PASS END=172967165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 172967166 . C . PASS END=172967189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,831:0,63,255:22,0 chr2 172967190 . T . PASS END=172967191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 172967192 . C . PASS END=172967200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 172967201 . C . PASS END=172967201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 172967202 . G . PASS END=172967213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,829:0,66,255:22,0 chr2 172967214 . G . PASS END=172967242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:14:0,42,520:0,42,255:19,0 chr2 172967243 . T . PASS END=172967248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 172967249 . G . PASS END=172967256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:14:0,21,315:0,26,255:10,0 chr2 172967257 . C . PASS END=172967261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr2 172967262 . G . PASS END=172967264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:8,0 chr2 172967265 . A . PASS END=172967266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 173292361 . G . PASS END=173292361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 173292395 . C . PASS END=173292395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 173292517 . A . PASS END=173292547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,706:0,57,255:19,0 chr2 173292548 . A . PASS END=173292622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:24,0 chr2 173292623 . A . PASS END=173292623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 173292624 . A . PASS END=173292637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 173292638 . G . PASS END=173292644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:22:0,52,792:0,52,255:19,0 chr2 173292645 . C . PASS END=173292645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 173292646 . T . PASS END=173292649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 173292650 . G . PASS END=173292651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 173292652 . T . PASS END=173292652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr2 173292653 . T . PASS END=173292661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,884:0,66,255:23,0 chr2 173292662 . C . PASS END=173292698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,676:0,41,255:19,0 chr2 173330267 . G . PASS END=173330268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 173330269 . T . PASS END=173330272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 173330273 . C . PASS END=173330280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 173330281 . C . PASS END=173330281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr2 173330282 . C . PASS END=173330296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,559:0,45,255:19,0 chr2 173330297 . G . PASS END=173330300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 173330301 . C . PASS END=173330301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 173330302 . C . PASS END=173330302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 173330303 . A . PASS END=173330303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 173330304 . C . PASS END=173330321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,862:0,61,255:25,0 chr2 173330322 . A . PASS END=173330322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,853:0,34,255:22,0 chr2 173330323 . C . PASS END=173330328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 173330329 . G . PASS END=173330329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:19,0 chr2 173330330 . G . PASS END=173330330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 173330331 . C . PASS END=173330331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 173330332 . T . PASS END=173330332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 173330333 . G . PASS END=173330348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:18:0,49,623:0,49,255:19,0 chr2 173330349 . A . PASS END=173330349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 173330350 . C . PASS END=173330353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 173330354 . C . PASS END=173330354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 173330355 . C . PASS END=173330363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 173330364 . T . PASS END=173330364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 173330365 . G . PASS END=173330370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,629:0,54,255:18,0 chr2 173330371 . G . PASS END=173330371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 173330372 . G . PASS END=173330377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 173330378 . G . PASS END=173330378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 173330379 . T . PASS END=173330391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 173332209 . C . PASS END=173332279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:36:0,93,1275:0,96,255:40,0 chr2 173332280 . A . PASS END=173332280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 173332281 . A . PASS END=173332288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,92,255:27,0 chr2 173333853 . A . PASS END=173334084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:35:0,87,1279:0,105,255:40,0 chr2 173334085 . C . PASS END=173334085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:27,0 chr2 173334086 . C . PASS END=173334089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 173334090 . G . PASS END=173334097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:29:0,76,1033:0,76,255:27,0 chr2 173334098 . T . PASS END=173334098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,967:0,40,255:23,0 chr2 173334099 . A . PASS END=173334105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,74,255:25,0 chr2 173334106 . A . PASS END=173334108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:28:0,42,630:0,84,255:15,0 chr2 173335702 . G . PASS END=173335833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:41:0,112,1507:0,112,255:40,0 chr2 173337502 . G . PASS END=173337518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1125:0,80,255:31,0 chr2 173337519 . A G, 44.24 PASS DP=31;MQ=250.00;MQRankSum=4.521;ReadPosRankSum=4.521;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,11,0:0.355,0.000:31:13,4,0:7,7,0:44:79,0,50,393,715,1109:255,0,255:20,0:4.4242e+01,1.8535e-04,5.3000e+01,3.9348e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,11,3,8:8,12,6,5 chr2 173337520 . G . PASS END=173337556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:31:0,93,1095:0,93,255:40,0 chr2 173337557 . A . PASS END=173337585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,102,255:40,0 chr2 173337586 . C . PASS END=173337606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,878:0,71,255:26,0 chr2 173337607 . A . PASS END=173337607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 173337608 . T . PASS END=173337610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 173337611 . C . PASS END=173337618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,66,255:17,0 chr2 173338783 . G . PASS END=173338785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 173338786 . T . PASS END=173338786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 173338787 . T . PASS END=173338797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,773:0,72,255:24,0 chr2 173338798 . C . PASS END=173338798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 173338799 . A . PASS END=173338799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 173338800 . G . PASS END=173338800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 173338801 . G . PASS END=173338816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,970:0,72,255:26,0 chr2 173338817 . T . PASS END=173338817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,882:0,39,255:25,0 chr2 173338818 . A . PASS END=173338825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 173338826 . G . PASS END=173338826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 173338827 . A . PASS END=173338827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 173338828 . T . PASS END=173338993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1236:0,86,255:40,0 chr2 173339657 . G . PASS END=173339770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:91:38:0,91,1343:0,91,255:40,0 chr2 173339771 . T . PASS END=173339807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,147,255:40,0 chr2 173339808 . G A, 50.00 PASS DP=51;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=3.566;FractionInformativeReads=0.961;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,28,0:0.571,0.000:49:10,12,0:11,16,0:48:85,0,48,947,751,1698:255,0,255:19,0:5.0000e+01,7.5588e-05,5.1309e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,10,12,16:14,7,18,10 chr2 173339809 . C . PASS END=173339845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:38:0,90,1350:0,113,255:40,0 chr2 173339846 . C . PASS END=173339848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:29,0 chr2 173339849 . A . PASS END=173339850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:36:0,69,1035:0,108,255:26,0 chr2 173340325 . A . PASS END=173340413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,100,1553:0,100,255:40,0 chr2 173340427 . C . PASS END=173340427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 173341123 . G . PASS END=173341241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:60:0,120,1800:0,153,255:40,0 chr2 173341246 . G . PASS END=173341246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 173344369 . A . PASS END=173344436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,110,1488:0,110,255:40,0 chr2 173344437 . A . PASS END=173344467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:54:0,93,1800:0,93,255:40,0 chr2 173344718 . C . PASS END=173344779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:70:0,120,1800:0,197,255:40,1 chr2 173344785 . T . PASS END=173344785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:65:0,120,1800:0,162,255:40,0 chr2 173349510 . C . PASS END=173349670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,111,1665:0,138,255:40,0 chr2 173349849 . G . PASS END=173349968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:36:0,95,1254:0,95,255:40,0 chr2 173349969 . G . PASS END=173349979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:34:0,60,900:0,102,255:24,0 chr2 173349980 . A . PASS END=173349980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 173349981 . G . PASS END=173349984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 173349985 . A . PASS END=173349988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:55:23:0,55,776:0,55,255:19,0 chr2 173349989 . T . PASS END=173349992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 173351751 . G . PASS END=173351866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,121,255:40,0 chr2 173351875 . C . PASS END=173351875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 173351992 . T . PASS END=173352024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1133:0,80,255:35,0 chr2 173352025 . T . PASS END=173352025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1209:0,61,255:32,0 chr2 173352026 . C . PASS END=173352026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 173352027 . A . PASS END=173352027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr2 173352028 . G . PASS END=173352065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,108,1282:0,109,255:40,0 chr2 173352066 . C . PASS END=173352102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,106,1688:0,106,255:40,0 chr2 173352103 . C T, 47.75 PASS DP=46;MQ=250.00;MQRankSum=5.665;ReadPosRankSum=3.252;FractionInformativeReads=0.978;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,19,0:0.422,0.000:45:13,13,0:13,6,0:47:83,0,50,651,922,1573:255,0,255:25,0:4.7749e+01,9.4744e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,16,7,12:15,11,9,10 chr2 173352104 . G . PASS END=173352127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:37:0,102,1360:0,102,255:40,0 chr2 173352128 . A . PASS END=173352128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1247:0,78,255:34,0 chr2 173352129 . C . PASS END=173352140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1321:0,95,255:36,0 chr2 173352141 . C . PASS END=173352143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:37:0,90,1350:0,95,255:31,0 chr2 173352144 . T . PASS END=173352144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:30,0 chr2 173352145 . A . PASS END=173352168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:32:0,83,1180:0,83,255:33,0 chr2 173352169 . G . PASS END=173352178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,87,255:26,0 chr2 173352179 . C . PASS END=173352179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:23,0 chr2 173352180 . C . PASS END=173352181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:27:0,69,1035:0,71,255:23,0 chr2 173352275 . G . PASS END=173352358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,128,255:40,0 chr2 173352456 . G . PASS END=173352535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,108,1515:0,108,255:40,0 chr2 173352544 . T . PASS END=173352544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1515:0,90,255:36,0 chr2 173352689 . A . PASS END=173352766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,117,1793:0,117,255:40,0 chr2 173352854 . A . PASS END=173352956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:38:0,96,1440:0,110,255:40,0 chr2 173354213 . G . PASS END=173354380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:39:0,87,1305:0,104,255:40,0 chr2 173354381 . C . PASS END=173354386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:72:39:0,72,1080:0,117,255:26,0 chr2 173354399 . A . PASS END=173354399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:20,0 chr2 173355738 . A . PASS END=173355738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 173355752 . G . PASS END=173355841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:68:0,120,1800:0,179,255:40,0 chr2 173355842 . C . PASS END=173355850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:67:0,120,1800:0,168,255:40,0 chr2 173355949 . A . PASS END=173355952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,138,255:40,0 chr2 173355953 . G . PASS END=173355994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,107,1488:0,107,255:40,0 chr2 173355995 . G . PASS END=173356031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1258:0,91,255:37,0 chr2 173356032 . G C, 36.66 PASS DP=37;MQ=249.97;MQRankSum=3.871;ReadPosRankSum=1.578;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,11,0:0.297,0.000:37:14,6,0:12,5,0:37:71,0,50,393,901,1295:255,0,255:26,0:3.6664e+01,9.5815e-04,5.3001e+01,3.9343e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,14,5,6:12,14,8,3 chr2 173356033 . A . PASS END=173356052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1305:0,105,255:36,0 chr2 173356053 . T . PASS END=173356053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:29,0 chr2 173356054 . C . PASS END=173356059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,102,255:31,0 chr2 173356153 . G . PASS END=173356231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:40:0,82,1435:0,82,255:40,0 chr2 173356232 . T . PASS END=173356232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr2 173356233 . G . PASS END=173356238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:39:0,82,1457:0,82,255:37,0 chr2 173356239 . T . PASS END=173356239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:35,0 chr2 173356240 . G . PASS END=173356247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:40:0,81,1421:0,81,255:36,0 chr2 173356248 . T . PASS END=173356251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:33,0 chr2 173362703 . G . PASS END=173362734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,118,1800:0,118,255:40,0 chr2 173362735 . A . PASS END=173362814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:45:0,81,1215:0,134,255:40,0 chr2 173362815 . T . PASS END=173362817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:78:45:0,78,1170:0,135,255:26,0 chr2 173362818 . T . PASS END=173362819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:45:0,81,1215:0,135,255:27,0 chr2 173362820 . C . PASS END=173362822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,99,255:26,0 chr2 173362823 . T . PASS END=173362828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 173366500 . T . PASS END=173366597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:42:0,86,1432:0,86,255:40,0 chr2 173366598 . T . PASS END=173366598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1366:0,68,255:37,0 chr2 173366599 . G . PASS END=173366607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:40:0,90,1402:0,90,255:39,0 chr2 173368819 . T . PASS END=173368820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:30,0 chr2 173368821 . T . PASS END=173368821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:28,0 chr2 173368822 . G . PASS END=173368826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 173368827 . C . PASS END=173368828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1086:0,77,255:31,0 chr2 173368829 . T . PASS END=173368836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1127:0,82,255:36,0 chr2 173368837 . T . PASS END=173368837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:55:37:0,55,1130:0,55,255:34,0 chr2 173368838 . C . PASS END=173368944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:37:0,108,1620:0,108,255:40,0 chr2 173368945 . A . PASS END=173368947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,118,1728:0,118,255:40,1 chr2 173368948 . A . PASS END=173368948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:76:55:0,76,1677:0,76,255:40,0 chr2 173368949 . C . PASS END=173368975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:87:50:0,87,1350:0,87,255:40,0 chr2 173368976 . C . PASS END=173368980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:69:52:0,69,1035:0,76,255:26,0 chr2 173369104 . C . PASS END=173369104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 173369230 . T . PASS END=173369230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 173369231 . A G, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=1.057;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,17,0:0.531,0.000:32:10,7,0:5,10,0:48:85,0,50,600,536,1136:255,0,255:14,0:5.0000e+01,6.6527e-05,5.2732e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,6,11:8,7,6,11 chr2 173369370 . C . PASS END=173369370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 173369444 . G . PASS END=173369444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 173369474 . T . PASS END=173369474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 173369499 . G . PASS END=173369499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 173369515 . T . PASS END=173369515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 173369572 . T . PASS END=173369572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 173369578 . A . PASS END=173369578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 173369663 . T . PASS END=173369663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 173369669 . A . PASS END=173369669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 173369813 . T . PASS END=173369813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 173369904 . A . PASS END=173369904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 173370017 . C . PASS END=173370017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:25,0 chr2 173370144 . C . PASS END=173370144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 173370179 . C . PASS END=173370179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 173370209 . T . PASS END=173370209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,884:0,61,255:22,0 chr2 173370238 . T . PASS END=173370238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 173370316 . T . PASS END=173370316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 173370449 . T . PASS END=173370449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 173370452 . G . PASS END=173370452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 173370591 . C . PASS END=173370591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 173370679 . C . PASS END=173370679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 173370731 . G . PASS END=173370731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 173370863 . A . PASS END=173370863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,253,255:40,0 chr2 173370877 . G . PASS END=173370877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:87:0,120,1800:0,255,255:40,0 chr2 173370920 . T . PASS END=173370920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr2 173371081 . G . PASS END=173371081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr2 173371087 . G . PASS END=173371087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 173371111 . A . PASS END=173371111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 173371155 . A . PASS END=173371155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 173420879 . A . PASS END=173420879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 173420880 . T . LowGQ END=173420880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,92:5,0,96:3,0 chr2 173420881 . G . PASS END=173420881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 173420882 . A . LowGQ END=173420914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:3:0,0,39:0,0,69:3,0 chr2 173420915 . G . PASS END=173420918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 173420919 . G . LowGQ END=173420920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 173420921 . C . PASS END=173420925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 173420926 . C . LowGQ END=173420926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 173420927 . C . PASS END=173420939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,125:0,12,125:6,0 chr2 173420940 . C . PASS END=173420969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr2 173420970 . A . PASS END=173420970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 173420971 . C . PASS END=173420976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:9,0 chr2 173420977 . C . PASS END=173420977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 173420978 . T . PASS END=173420978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 173420979 . C . PASS END=173421032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr2 173421033 . T . PASS END=173421033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 173421034 . C . PASS END=173421047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 173421048 . T . PASS END=173421074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr2 173423436 . G . PASS END=173423564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:36:0,87,1305:0,98,255:40,0 chr2 173423565 . T . PASS END=173423576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:61:26:0,61,862:0,61,255:25,0 chr2 173423577 . G . PASS END=173423577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,848:0,39,255:21,0 chr2 173426948 . G . PASS END=173427019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,191,255:40,0 chr2 173427469 . A . PASS END=173427528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:71:0,120,1800:0,166,255:40,0 chr2 173428780 . G . PASS END=173428786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:48:0,92,1639:0,92,255:40,0 chr2 173429231 . C . PASS END=173429231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 173429232 . T . PASS END=173429232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,935:0,48,255:26,0 chr2 173429233 . T . PASS END=173429249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:38,0 chr2 173429250 . C . PASS END=173429250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:37,0 chr2 173429251 . G . PASS END=173429411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:38:0,108,1443:0,110,255:40,0 chr2 173429412 . C . PASS END=173429413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:78:47:0,78,1170:0,125,255:26,0 chr2 173429414 . C . PASS END=173429415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:44:0,81,1215:0,132,255:28,0 chr2 173429706 . C . PASS END=173429801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:58:0,120,1800:0,122,255:40,0 chr2 173431584 . A . PASS END=173431661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,192,255:40,0 chr2 173431928 . T . PASS END=173431944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:109:0,120,1800:0,255,255:40,0 chr2 173433469 . C . PASS END=173433545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:75:0,120,1800:0,218,255:40,0 chr2 173435454 . A . PASS END=173435533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:45:0,120,1800:0,128,255:40,0 chr2 173435534 . T . PASS END=173435552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:59:0,120,1800:0,160,255:40,0 chr2 173451006 . A . PASS END=173451036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,111,1516:0,111,255:40,0 chr2 173451037 . G . PASS END=173451073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,147,255:40,0 chr2 173451074 . T C, 46.09 PASS DP=61;MQ=250.00;MQRankSum=6.548;ReadPosRankSum=1.868;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,24,0:0.393,0.000:61:19,12,0:18,12,0:45:81,0,50,858,1323,2182:255,0,255:36,0:4.6090e+01,1.2866e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,19,7,17:28,9,15,9 chr2 173451075 . G . PASS END=173451111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,140,255:40,0 chr2 173451112 . C . PASS END=173451116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,117,1755:0,144,255:39,0 chr2 173457663 . G . PASS END=173457773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:31:0,80,1169:0,80,255:40,0 chr2 173457774 . A . PASS END=173457776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 173460557 . G . PASS END=173460558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr2 173460559 . T . PASS END=173460561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,678:0,60,255:25,0 chr2 173460562 . G . PASS END=173460564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:29,0 chr2 173460565 . A . PASS END=173460565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 173460566 . A . PASS END=173460573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1017:0,87,255:30,0 chr2 173460574 . A . PASS END=173460574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 173460575 . A . PASS END=173460579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 173460580 . A . PASS END=173460580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 173460581 . A . PASS END=173460689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:31:0,87,1217:0,92,255:40,0 chr2 173460690 . G . PASS END=173460697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:25,0 chr2 173600712 . A . PASS END=173600729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 173600730 . G . PASS END=173600732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr2 173600733 . C . PASS END=173600740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 173600741 . C . PASS END=173600751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:12,0 chr2 173600752 . A . PASS END=173600761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:21:17:0,21,315:0,34,255:9,0 chr2 173600762 . C . PASS END=173600767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:12:17:0,12,180:0,35,255:6,0 chr2 173600768 . G . PASS END=173600776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:3:15:0,3,45:0,31,255:2,0 chr2 173601119 . A . PASS END=173601129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 173601130 . T . PASS END=173601130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,349:0,2,255:10,0 chr2 173601131 . T . PASS END=173601134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 173601135 . G . PASS END=173601137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 173601138 . A . PASS END=173601145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 173601146 . C . PASS END=173601153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 173659753 . A . PASS END=173659875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,120,1800:0,141,255:40,0 chr2 173659876 . T . PASS END=173659895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,111,1665:0,137,255:40,0 chr2 173662253 . T . PASS END=173662274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,129,255:40,0 chr2 173662275 . A . PASS END=173662316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,118,1741:0,118,255:40,0 chr2 173662317 . A . PASS END=173662341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:42:0,87,1305:0,110,255:40,0 chr2 173679007 . G . PASS END=173679008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 173679009 . T . PASS END=173679009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 173679010 . G . PASS END=173679010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 173679011 . C . PASS END=173679012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:22,0 chr2 173679013 . G . PASS END=173679017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:24,0 chr2 173679018 . C . PASS END=173679018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 173679019 . A . PASS END=173679019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 173679020 . T . PASS END=173679129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:89:31:0,89,1141:0,89,255:40,0 chr2 173679130 . A . PASS END=173679130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1217:0,61,255:32,0 chr2 173679131 . A . PASS END=173679143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1180:0,85,255:34,0 chr2 173679144 . A . PASS END=173679149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,900:0,82,255:22,0 chr2 173679150 . G . PASS END=173679153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:28:0,51,765:0,84,255:18,0 chr2 173686693 . A . PASS END=173686700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,186,255:40,0 chr2 173686701 . C . PASS END=173686704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:68:0,120,1800:0,171,255:40,0 chr2 173782530 . A . PASS END=173782602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:53:0,120,1800:0,126,255:40,0 chr2 173787009 . G . PASS END=173787028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,123,255:40,0 chr2 173825488 . A . PASS END=173825541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,107,1439:0,107,255:40,0 chr2 173825850 . G . PASS END=173825956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:63:0,120,1800:0,158,255:40,0 chr2 173830290 . A . PASS END=173830411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:43:0,85,1565:0,85,255:40,0 chr2 173831989 . T . PASS END=173832054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1233:0,86,255:37,0 chr2 173832055 . A . PASS END=173832055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr2 173832056 . T . PASS END=173832116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:36:0,84,1244:0,95,255:38,0 chr2 173832117 . C . PASS END=173832117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:30,0 chr2 173832118 . T . PASS END=173832125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:30,0 chr2 173832126 . T . PASS END=173832126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:26,0 chr2 173832127 . C . PASS END=173832127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 173832128 . A . PASS END=173832153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,922:0,62,255:25,0 chr2 173832154 . G . PASS END=173832154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 173832155 . G . PASS END=173832158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 173832159 . A . PASS END=173832159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr2 173832160 . T . PASS END=173832171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 173832172 . C . PASS END=173832172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 173837017 . G . PASS END=173837041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:55:0,120,1800:0,132,255:40,0 chr2 173848224 . A . PASS END=173848248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:52:0,120,1800:0,144,255:40,0 chr2 173848249 . C . PASS END=173848308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:67:0,120,1800:0,200,255:40,0 chr2 173850161 . G . PASS END=173850221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:43:0,111,1665:0,129,255:40,0 chr2 173852924 . T . PASS END=173853000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:81:0,120,1800:0,203,255:40,0 chr2 173853421 . G . PASS END=173853567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,99,1485:0,120,255:40,0 chr2 173855538 . G . PASS END=173855653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:40:0,96,1440:0,107,255:40,0 chr2 173861194 . G . PASS END=173861282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,127,255:40,0 chr2 173865994 . A . PASS END=173866072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:44:0,108,1620:0,120,255:40,0 chr2 173879192 . C . PASS END=173879342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1048:0,81,255:40,0 chr2 173881077 . G . PASS END=173881086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:30:0,89,1058:0,89,255:35,0 chr2 173881087 . T . PASS END=173881087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1218:0,77,255:35,0 chr2 173881088 . A . PASS END=173881165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:39:0,111,1467:0,117,255:40,0 chr2 173881902 . C . PASS END=173881932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,161,255:40,0 chr2 173882154 . C . PASS END=173882163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 173882164 . T . PASS END=173882164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 173882165 . T . PASS END=173882168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1000:0,93,255:31,0 chr2 173882169 . C . PASS END=173882169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 173882170 . A . PASS END=173882232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,89,255:37,0 chr2 173883384 . T . PASS END=173883384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 173883385 . T . PASS END=173883385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 173883386 . C . PASS END=173883388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:17,0 chr2 173883389 . T . PASS END=173883389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:16,0 chr2 173883390 . T . PASS END=173883396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:19,0 chr2 173883397 . C . PASS END=173883411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,760:0,63,255:25,0 chr2 173883412 . C . PASS END=173883498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1174:0,85,255:39,0 chr2 173883499 . C . PASS END=173883504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 173883505 . C . PASS END=173883514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,984:0,81,255:27,0 chr2 173883515 . A . PASS END=173883524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:26,0 chr2 173883525 . G . PASS END=173883530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:23:0,51,765:0,69,255:19,0 chr2 173885346 . A . PASS END=173885443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,105,1436:0,109,255:40,0 chr2 173891300 . A . PASS END=173891425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:85:37:0,85,1418:0,85,255:40,0 chr2 173891809 . C . PASS END=173891987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:43:0,93,1395:0,129,255:40,0 chr2 173894892 . C . PASS END=173894982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,99,1485:0,107,255:40,0 chr2 173898642 . A . PASS END=173898692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:48:0,118,1800:0,118,255:40,0 chr2 173900853 . G . PASS END=173900940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:41:0,96,1443:0,96,255:40,0 chr2 173901356 . A . PASS END=173901438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:75:0,120,1800:0,211,255:40,0 chr2 173901674 . C . PASS END=173901703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,232,255:40,0 chr2 173913328 . C . PASS END=173913382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:63:0,109,1800:0,109,255:40,0 chr2 173916368 . A . PASS END=173916495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:40:0,117,1496:0,120,255:40,0 chr2 173955760 . A . PASS END=173955763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,997:0,90,255:31,0 chr2 173955764 . C . PASS END=173955764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 173955765 . G . PASS END=173955765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 173955766 . T . PASS END=173955766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1036:0,65,255:31,0 chr2 173955767 . C . PASS END=173955800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:32:0,89,1189:0,89,255:40,0 chr2 173955801 . T . PASS END=173955801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1321:0,76,255:39,0 chr2 173955802 . G . PASS END=173955875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:40:0,90,1350:0,104,255:40,0 chr2 173955876 . C . PASS END=173955913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:24,0 chr2 173955914 . A . PASS END=173955918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr2 174034533 . G . PASS END=174034620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,112,1703:0,112,255:40,0 chr2 174047582 . A . PASS END=174047683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:90:39:0,90,1380:0,90,255:40,0 chr2 174052286 . G . PASS END=174052351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:77:0,120,1800:0,218,255:40,0 chr2 174055623 . T . PASS END=174055645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:84:0,120,1800:0,196,255:40,0 chr2 174055646 . T C, 48.46 PASS DP=89;MQ=249.93;MQRankSum=7.610;ReadPosRankSum=2.990;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:51,38,0:0.427,0.000:89:22,16,0:29,22,0:47:83,0,50,1359,1627,2986:255,0,255:40,0:4.8464e+01,8.3612e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,23,23,15:29,22,27,11 chr2 174055647 . T . PASS END=174055651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:90:0,120,1800:0,255,255:40,0 chr2 174055768 . A . PASS END=174055890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:39:0,86,1305:0,86,255:40,0 chr2 174055891 . T . PASS END=174055899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:63:32:0,63,945:0,96,255:23,0 chr2 174055900 . G . PASS END=174055900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr2 174055901 . G . PASS END=174055903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr2 174055904 . T . PASS END=174055904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,908:0,47,255:21,0 chr2 174055905 . G . PASS END=174055905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 174062754 . G . PASS END=174062840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,121,255:40,0 chr2 174068524 . A . PASS END=174068550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,177,255:40,0 chr2 174068551 . A . PASS END=174068598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,162,255:40,0 chr2 174074457 . A . PASS END=174074563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,118,1492:0,118,255:40,0 chr2 174081843 . G . PASS END=174081974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:40:0,87,1373:0,87,255:40,0 chr2 174081975 . C . PASS END=174081976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,98,255:26,0 chr2 174081977 . C . PASS END=174081977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:40:0,84,1260:0,120,255:28,0 chr2 174081978 . G . PASS END=174081978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 174085878 . C . PASS END=174085879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 174085880 . T . PASS END=174085880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr2 174085881 . C . PASS END=174086049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1175:0,86,255:40,0 chr2 174086050 . T . PASS END=174086050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1488:0,74,255:40,0 chr2 174086051 . C . PASS END=174086240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:34:0,80,1311:0,80,255:40,1 chr2 174086241 . A . PASS END=174086247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,83,255:24,0 chr2 174086248 . A . PASS END=174086248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr2 174086249 . T . PASS END=174086249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:24,0 chr2 174086250 . A . PASS END=174086258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 174094417 . C . PASS END=174094461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,159,255:40,0 chr2 174096920 . T . PASS END=174096950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,160,255:40,0 chr2 174097048 . G . PASS END=174097187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,100,1530:0,100,255:40,0 chr2 174103101 . T . PASS END=174103163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:81:0,120,1800:0,214,255:40,0 chr2 174104132 . G . PASS END=174104224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,106,1737:0,106,255:40,0 chr2 174123427 . G . PASS END=174123543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:46:0,114,1751:0,114,255:40,0 chr2 174125791 . C . PASS END=174125865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,111,1665:0,113,255:40,0 chr2 174128473 . A . PASS END=174128623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:50:0,117,1735:0,117,255:40,0 chr2 174130778 . G . PASS END=174130800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,782:0,66,255:26,0 chr2 174130801 . A . PASS END=174131083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:28:0,84,1025:0,84,255:40,0 chr2 174131084 . G . PASS END=174131084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1325:0,73,255:34,0 chr2 174131085 . G . PASS END=174131430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1113:0,85,255:40,0 chr2 174131431 . A . PASS END=174131431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:28,0 chr2 174131432 . A . PASS END=174131439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1188:0,85,255:30,0 chr2 174131440 . A . PASS END=174131440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 174131441 . G . PASS END=174131441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 174131442 . A . PASS END=174131442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr2 174131443 . G . PASS END=174131447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 174131448 . A . PASS END=174131466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:21:0,60,770:0,63,255:26,0 chr2 174131467 . A . PASS END=174131471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 174131472 . C . PASS END=174131478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 174219692 . A . PASS END=174219703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:16,0 chr2 174219704 . C . PASS END=174219711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 174219712 . G . PASS END=174219712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 174223440 . C . PASS END=174223565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,100,1504:0,100,255:40,0 chr2 174223983 . A . PASS END=174223985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 174223986 . C . PASS END=174223993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1181:0,86,255:34,0 chr2 174223994 . C . PASS END=174223994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:32,0 chr2 174223995 . A . PASS END=174224168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:33:0,81,1215:0,86,255:40,0 chr2 174224169 . G . PASS END=174224195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,818:0,64,255:26,0 chr2 174224196 . G . PASS END=174224211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:41:18:0,41,630:0,41,255:19,0 chr2 174224212 . A . PASS END=174224219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:11,0 chr2 174227954 . A . PASS END=174227954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr2 174227955 . G . PASS END=174227955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 174227956 . G . PASS END=174227963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:32,0 chr2 174227964 . C . PASS END=174227964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:30,0 chr2 174227965 . A . PASS END=174227966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 174227967 . T . PASS END=174227967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr2 174227968 . T . PASS END=174228190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1209:0,92,255:40,0 chr2 174228546 . C . PASS END=174228623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,129,255:40,0 chr2 174229523 . C . PASS END=174229531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,629:0,40,255:16,0 chr2 174229532 . A . PASS END=174229532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:16,0 chr2 174229533 . G . PASS END=174229541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,613:0,54,255:18,0 chr2 174229542 . G . PASS END=174229549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:25,0 chr2 174229550 . T . PASS END=174229550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 174229551 . T . PASS END=174229556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 174229557 . G . PASS END=174229560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 174229561 . T . PASS END=174229578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr2 174229579 . T . PASS END=174229581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 174229582 . A . PASS END=174229582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr2 174229583 . C . PASS END=174229602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,950:0,84,255:29,0 chr2 174229603 . C . PASS END=174229614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,1080:0,74,255:26,0 chr2 174229615 . C . PASS END=174229705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:28:0,81,1053:0,82,255:35,0 chr2 174229706 . G . PASS END=174229706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 174229707 . G . PASS END=174229709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 174229710 . A . PASS END=174229710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 174229711 . C . PASS END=174229711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 174229712 . A . PASS END=174229717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,84,255:25,0 chr2 174230180 . G . PASS END=174230190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:17,0 chr2 174230191 . G . PASS END=174230197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:26,0 chr2 174230198 . A . PASS END=174230211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:29,0 chr2 174230212 . A . PASS END=174230212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 174230213 . T . PASS END=174230229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1260:0,87,255:36,0 chr2 174230230 . G . PASS END=174230230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:34,0 chr2 174230231 . C . PASS END=174230275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:35:0,101,1305:0,101,255:40,0 chr2 174230276 . A . PASS END=174230276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1232:0,78,255:37,0 chr2 174230277 . A . PASS END=174230287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1374:0,111,255:38,0 chr2 174230288 . A . PASS END=174230288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:36,0 chr2 174230289 . A . PASS END=174230302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1418:0,98,255:37,0 chr2 174230303 . A . PASS END=174230303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1235:0,78,255:31,0 chr2 174230304 . T . PASS END=174230316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,85,255:32,0 chr2 174230317 . A . PASS END=174230320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:29:0,63,1080:0,63,255:26,0 chr2 174231011 . G . PASS END=174231018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,931:0,75,255:26,0 chr2 174231019 . T . PASS END=174231019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1000:0,43,255:24,0 chr2 174231020 . T . PASS END=174231024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:25,0 chr2 174231025 . T . PASS END=174231026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 174231027 . A . PASS END=174231059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1139:0,80,255:34,0 chr2 174231060 . A . PASS END=174231060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,959:0,65,255:30,0 chr2 174231061 . C . PASS END=174231078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1216:0,83,255:34,0 chr2 174231079 . C . PASS END=174231079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1186:0,50,255:31,0 chr2 174231080 . T . PASS END=174231082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 174231083 . G . PASS END=174231083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 174231084 . G . PASS END=174231127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:29:0,81,1072:0,86,255:35,0 chr2 174231128 . G . PASS END=174231128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 174231129 . G . PASS END=174231132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 174231133 . A . PASS END=174231143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:24,0 chr2 174231144 . A . PASS END=174231144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 174231145 . T . PASS END=174231145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:19,0 chr2 174231146 . G . PASS END=174231146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 174231147 . C . PASS END=174231149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 174231150 . T . PASS END=174231160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 174231878 . A . PASS END=174231920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1124:0,80,255:33,0 chr2 174231921 . T . PASS END=174231922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1148:0,71,255:32,0 chr2 174231923 . T . PASS END=174231992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:32:0,81,1172:0,83,255:35,0 chr2 174231993 . A . PASS END=174232014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:25,0 chr2 174232362 . C . PASS END=174232392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,211,255:40,0 chr2 174748194 . T . PASS END=174748199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:31,0 chr2 174748200 . T . PASS END=174748216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:25:0,69,947:0,75,255:25,0 chr2 174772683 . T . PASS END=174772693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1141:0,93,255:32,0 chr2 174774669 . T . PASS END=174774985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:35:0,89,1233:0,89,255:40,0 chr2 174777798 . C . PASS END=174777806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:32:0,83,1156:0,83,255:34,0 chr2 174777807 . T . PASS END=174777807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:33,0 chr2 174777808 . T . PASS END=174777984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1105:0,92,255:40,0 chr2 174777985 . A . PASS END=174777985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:27,0 chr2 174777986 . T . PASS END=174777987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 174777988 . G . PASS END=174777988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 174777989 . G . PASS END=174777989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 174777990 . T . PASS END=174777994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,70,255:24,0 chr2 174783321 . C . PASS END=174783484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,108,1620:0,120,255:40,0 chr2 174783485 . A . PASS END=174783498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:33:0,84,1260:0,94,255:33,0 chr2 174783499 . C . PASS END=174783499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:27,0 chr2 174783500 . C . PASS END=174783503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 174783504 . A . PASS END=174783513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1124:0,77,255:26,0 chr2 174799098 . C . PASS END=174799139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:50:0,117,1686:0,117,255:40,0 chr2 174819601 . C . PASS END=174819953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:82:34:0,82,1234:0,82,255:40,0 chr2 174819954 . T . PASS END=174819954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1410:0,79,255:39,0 chr2 174819955 . G . PASS END=174820332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:41:0,89,1348:0,89,255:40,0 chr2 174820333 . T . PASS END=174820333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1657:0,75,255:31,0 chr2 174820334 . A . PASS END=174820337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:96:42:0,96,1440:0,126,255:33,0 chr2 174820338 . T . PASS END=174820338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:32,0 chr2 174820339 . G . PASS END=174820471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:37:0,87,1322:0,87,255:40,0 chr2 174820472 . C . PASS END=174820472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:27,0 chr2 174820473 . A . PASS END=174820510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1072:0,87,255:31,0 chr2 174820511 . A . PASS END=174820511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,919:0,70,255:27,0 chr2 174820512 . C . PASS END=174820523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 174820524 . A . PASS END=174820530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:28:0,77,1070:0,77,255:26,0 chr2 174820531 . G . PASS END=174820532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 174820533 . A . PASS END=174820533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:26,0 chr2 174820534 . C . PASS END=174820535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 174820536 . T . PASS END=174820537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,872:0,64,255:26,0 chr2 174820538 . G . PASS END=174820552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:34,0 chr2 174820553 . T . PASS END=174820553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:33,0 chr2 174820554 . G . PASS END=174820588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1180:0,80,255:36,0 chr2 174820589 . A . PASS END=174820589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 174820590 . G . PASS END=174820597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:35,0 chr2 174820598 . T . PASS END=174820598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr2 174820599 . A . PASS END=174820949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:31:0,81,1133:0,82,255:40,0 chr2 174820950 . A . PASS END=174820950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:26,0 chr2 174820951 . A . PASS END=174820956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 174820957 . C . PASS END=174820957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 174820958 . T . PASS END=174820960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 174828489 . C . PASS END=174828501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr2 174828502 . G . PASS END=174828508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:9,0 chr2 174828509 . C . PASS END=174828537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:13,0 chr2 174828538 . T . PASS END=174828555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 174828556 . G . PASS END=174828556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 174828557 . G . PASS END=174828576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,554:0,48,255:17,0 chr2 174828577 . G . PASS END=174828577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 174828578 . C . PASS END=174828587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 174828588 . A . PASS END=174828588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 174828589 . G . PASS END=174828605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,607:0,48,255:17,0 chr2 174828606 . A . PASS END=174828609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 174828610 . T . PASS END=174828610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr2 174828611 . C . PASS END=174828611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 174829133 . C . PASS END=174829133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,333:0,27,255:9,0 chr2 174829134 . T . PASS END=174829134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr2 174829135 . G . PASS END=174829137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 174829138 . C . PASS END=174829138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 174829139 . C . PASS END=174829145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 174829146 . G . PASS END=174829155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:13,0 chr2 174829156 . C . PASS END=174829156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 174829157 . C . PASS END=174829166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr2 174829167 . C . PASS END=174829167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 174829168 . C . PASS END=174829172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 174829173 . T . PASS END=174829173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 174829174 . G . PASS END=174829174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 174829175 . T . PASS END=174829175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 174829176 . T . PASS END=174829188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:13,0 chr2 174829189 . G . PASS END=174829200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 174829201 . G . PASS END=174829213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 174829214 . G . PASS END=174829214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr2 174829215 . C . PASS END=174829225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 174829226 . G . PASS END=174829231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 174829232 . A . PASS END=174829232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr2 174829233 . T . PASS END=174829233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 174829234 . C . PASS END=174829234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,435:0,3,255:11,0 chr2 174829235 . C . PASS END=174829241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:12,0 chr2 174829242 . A . PASS END=174829242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 174829243 . A . PASS END=174829243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 174829244 . G . PASS END=174829244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 174829245 . G . PASS END=174829255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 174829256 . C . PASS END=174829256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr2 174829257 . T . PASS END=174829262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 174829263 . T . PASS END=174829264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:9,0 chr2 174829265 . C . PASS END=174829269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 174829270 . G . PASS END=174829271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 174829272 . T . PASS END=174829272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,286:0,13,255:8,0 chr2 174829273 . T . PASS END=174829281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 174829893 . C . PASS END=174829895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 174829896 . T . PASS END=174829896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 174829897 . C . PASS END=174829899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 174940147 . C . PASS END=174940255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,164,255:40,0 chr2 174943696 . C . PASS END=174943722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:38:0,98,1365:0,98,255:40,0 chr2 174943723 . T . PASS END=174943818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:34:0,85,1127:0,85,255:40,0 chr2 174945880 . C . PASS END=174945976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,105,1673:0,105,255:40,0 chr2 174946652 . C . PASS END=174946652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 174946653 . T . PASS END=174946653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1213:0,77,255:32,0 chr2 174946654 . T . PASS END=174946722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:36:0,99,1382:0,104,255:40,0 chr2 174946723 . G . PASS END=174946759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:43:0,94,1620:0,94,255:40,0 chr2 174946760 . T C, 50.00 PASS DP=43;MQ=192.89;MQRankSum=1.015;ReadPosRankSum=3.265;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,24,0:0.558,0.000:43:13,15,0:6,9,0:48:85,0,49,848,642,1490:255,0,255:15,0:5.0000e+01,7.2481e-05,5.1751e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,8,16:9,10,15,9 chr2 174946761 . A . PASS END=174946763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:42:0,96,1440:0,126,255:35,0 chr2 174946764 . T . PASS END=174946765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1327:0,75,255:32,0 chr2 174946766 . T . PASS END=174946766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1278:0,59,255:30,0 chr2 174946767 . C . PASS END=174946779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:32:0,87,1305:0,89,255:30,0 chr2 174946780 . A . PASS END=174946780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:28,0 chr2 174946781 . A . PASS END=174946790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1094:0,80,255:30,0 chr2 174946791 . A . PASS END=174946791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 174946792 . C . PASS END=174946792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 174987908 . C . PASS END=174988005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:83:0,120,1800:0,233,255:40,2 chr2 174988323 . C . PASS END=174988403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:51:0,87,1305:0,131,255:40,0 chr2 175006553 . A . PASS END=175006573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,132,255:40,0 chr2 175006574 . A . PASS END=175006574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,7:58:57:58:0,57,1524:0,57,255:40,0 chr2 175006575 . T . PASS END=175006575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,173,255:40,0 chr2 175006576 . C . PASS END=175006576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,9:59:13:59:0,13,1505:0,13,255:40,0 chr2 175006577 . T . PASS END=175006577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 175006578 . C . PASS END=175006578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,7:62:55:62:0,55,1592:0,55,255:40,0 chr2 175006579 . C . PASS END=175006689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,105,1575:0,114,255:40,0 chr2 175006690 . T . PASS END=175006690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:30,0 chr2 175006691 . T . PASS END=175006699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,101,255:31,0 chr2 175006700 . G . PASS END=175006725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr2 175006726 . C . PASS END=175006728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 175087761 . G . PASS END=175087799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:92:35:0,92,1259:0,92,255:40,0 chr2 175087800 . A . PASS END=175087800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1390:0,71,255:40,0 chr2 175087801 . T . PASS END=175087867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:40:0,80,1458:0,80,255:40,0 chr2 175087868 . T . PASS END=175087868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1287:0,62,255:31,0 chr2 175087869 . T . PASS END=175087875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:34:0,95,1371:0,95,255:32,0 chr2 175087876 . G . PASS END=175087876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:29,0 chr2 175087877 . G . PASS END=175087888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1272:0,92,255:31,0 chr2 175094036 . C . PASS END=175094046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 175094047 . G . PASS END=175094053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 175094054 . T . PASS END=175094054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 175094055 . G . PASS END=175094069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1062:0,90,255:30,0 chr2 175094070 . A . PASS END=175094070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 175094071 . C . PASS END=175094156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1170:0,93,255:40,0 chr2 175094157 . A . PASS END=175094160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,102,255:26,0 chr2 175094161 . A . PASS END=175094167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 175094168 . A . PASS END=175094168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 175094169 . A . PASS END=175094179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 175111443 . C . PASS END=175111467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1275:0,87,255:39,0 chr2 175111468 . C . PASS END=175111468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:37,0 chr2 175111469 . A . PASS END=175111543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1249:0,84,255:40,0 chr2 175112398 . C . PASS END=175112457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:98:42:0,98,1504:0,98,255:40,0 chr2 175199821 . A . PASS END=175199827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:18,0 chr2 175199828 . C . PASS END=175199841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:22,0 chr2 175200835 . G . PASS END=175200837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 175200838 . G . PASS END=175200838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 175200839 . A . PASS END=175200860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,368:0,36,255:13,0 chr2 175200861 . G . PASS END=175200862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:13,0 chr2 175200863 . T . PASS END=175200863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 175200864 . G . PASS END=175200868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 175200869 . T . PASS END=175200869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 175200870 . G . PASS END=175200871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 175200872 . T . PASS END=175200874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 175200875 . C . PASS END=175200878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 175200879 . G . PASS END=175200879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 175200880 . A . PASS END=175200880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr2 175200881 . C . PASS END=175200891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 175200892 . A . PASS END=175200892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr2 175200893 . T . PASS END=175200900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 175200901 . A . PASS END=175200901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr2 175200902 . C . PASS END=175200902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 175200903 . G . PASS END=175200903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 175200904 . A . PASS END=175200905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 175200906 . C . PASS END=175200906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 175200907 . C . PASS END=175200915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 175200916 . A . PASS END=175200916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 175200917 . C . PASS END=175200917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 175200918 . G . PASS END=175200918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 175200919 . C . PASS END=175200949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,398:0,33,255:12,0 chr2 175200950 . G . PASS END=175200957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 175200958 . C . PASS END=175200963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 175200964 . A . PASS END=175201002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,584:0,48,255:17,0 chr2 175201003 . T . PASS END=175201003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:13,0 chr2 175201004 . C . PASS END=175201004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:13,0 chr2 175201005 . G . PASS END=175201012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 175201013 . C . PASS END=175201013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:13,0 chr2 175201014 . G . PASS END=175201076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:16,0 chr2 175201077 . C . PASS END=175201077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 175201078 . T . PASS END=175201081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 175201082 . G . PASS END=175201082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 175201083 . C . PASS END=175201089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr2 175201090 . T . PASS END=175201105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,25,255:9,0 chr2 175201106 . C . PASS END=175201106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr2 175201107 . G . PASS END=175201119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,311:0,24,255:9,0 chr2 175201120 . A . LowGQ END=175201120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,224:20,0,244:6,0 chr2 175201121 . G . PASS END=175201122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 175201123 . G . LowGQ END=175201123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,238:6,0,244:6,0 chr2 175201124 . A . PASS END=175201126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 175201127 . A . PASS END=175201131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,321:0,30,255:10,0 chr2 175201132 . G . PASS END=175201133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 175201134 . C . PASS END=175201135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:7,0 chr2 175201136 . T . PASS END=175201136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 175201137 . C . LowGQ END=175201137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,233:3,0,236:6,0 chr2 175201138 . T . PASS END=175201138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 175201139 . T . PASS END=175201139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:6,0 chr2 175201140 . C . PASS END=175201140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 175201141 . T . PASS END=175201141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:6,0 chr2 175201142 . C . PASS END=175201146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,227:7,0 chr2 175201147 . T . LowGQ END=175201148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,122:0,0,148:6,0 chr2 175201149 . G . PASS END=175201149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 175201150 . G . LowGQ END=175201151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,2:7:0:7:0,0,139:0,0,165:6,0 chr2 175201152 . G . PASS END=175201154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 175201155 . T . LowGQ END=175201156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,119:0,0,137:6,0 chr2 175201157 . C . PASS END=175201159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 175201160 . C . PASS END=175201160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,149:0,4,149:6,0 chr2 175201161 . G . PASS END=175201166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,197:0,21,197:7,0 chr2 175201167 . A . PASS END=175201167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,164:0,4,164:5,0 chr2 175201168 . G . PASS END=175201176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:7:0,12,180:0,21,241:6,0 chr2 175201177 . G . PASS END=175201177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 175201178 . T . PASS END=175201186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 175201187 . A . PASS END=175201187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr2 175201188 . G . PASS END=175201192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,217:0,18,217:6,0 chr2 175201193 . C . PASS END=175201210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:8,0 chr2 175201211 . T . PASS END=175201211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 175201212 . C . PASS END=175201212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 175201213 . A . LowGQ END=175201213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,210:7,0,217:7,0 chr2 175201214 . T . PASS END=175201226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,227:0,24,227:9,0 chr2 175201227 . C . PASS END=175201232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 175201233 . G . PASS END=175201233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 175201234 . G . PASS END=175201245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:13,0 chr2 175201246 . C . PASS END=175201246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 175201247 . T . PASS END=175201247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 175201248 . G . PASS END=175201266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:16:0,40,576:0,40,255:19,0 chr2 175201267 . G . PASS END=175201268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 175201269 . G . PASS END=175201269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:20,0 chr2 175201270 . C . PASS END=175201270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 175201271 . A . PASS END=175201273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 175201274 . C . PASS END=175201274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 175201275 . G . PASS END=175201275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 175201276 . T . PASS END=175201276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 175201277 . A . PASS END=175201278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 175201279 . G . PASS END=175201280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 175201281 . G . PASS END=175201281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr2 175201282 . T . PASS END=175201286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:24,0 chr2 175201287 . G . PASS END=175201287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 175201288 . T . PASS END=175201289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 175201290 . C . PASS END=175201290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 175201291 . A . PASS END=175201291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 175201292 . A . PASS END=175201293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,790:0,53,255:22,0 chr2 175201294 . T . PASS END=175201296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 175201297 . G . PASS END=175201298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 175201299 . C . PASS END=175201299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 175201300 . T . PASS END=175201300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 175201301 . T . PASS END=175201312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,848:0,72,255:24,0 chr2 175201313 . T . PASS END=175201313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 175201314 . G . PASS END=175201327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 175201328 . T . PASS END=175201328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 175201329 . G . PASS END=175201337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr2 175201338 . C . PASS END=175201338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr2 175201339 . G . PASS END=175201339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 175201340 . C . PASS END=175201365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr2 175201366 . A . PASS END=175201366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 175201367 . G . PASS END=175201380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 175201381 . T . PASS END=175201381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 175201382 . G . PASS END=175201385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 175201386 . G . PASS END=175201386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 175201387 . G . PASS END=175201387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 175201388 . A . PASS END=175201407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,52,255:19,0 chr2 175201408 . G . PASS END=175201408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:17,0 chr2 175201409 . G . PASS END=175201423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:18:0,46,653:0,46,255:18,0 chr2 175201424 . T . PASS END=175201424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 175201425 . G . PASS END=175201430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 175201431 . G . PASS END=175201431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 175201432 . G . PASS END=175201435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:17,0 chr2 175201436 . C . PASS END=175201436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 175201437 . C . PASS END=175201453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:19,0 chr2 175201454 . A . PASS END=175201454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,706:0,32,255:19,0 chr2 175201455 . C . PASS END=175201490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,629:0,40,255:19,0 chr2 175201491 . G . PASS END=175201491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 175201492 . C . PASS END=175201513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,621:0,51,255:17,0 chr2 175201514 . C . PASS END=175201514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:15,0 chr2 175201515 . C . PASS END=175201517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 175201518 . G . PASS END=175201518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 175201519 . G . PASS END=175201521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 175201522 . C . PASS END=175201522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 175201523 . T . PASS END=175201543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 175201544 . C . PASS END=175201552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr2 175201553 . T . PASS END=175201553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr2 175201554 . G . PASS END=175201555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr2 175201556 . T . PASS END=175201565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 175201566 . C . PASS END=175201572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 175201573 . C . PASS END=175201573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr2 175201574 . T . PASS END=175201575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 175201576 . C . PASS END=175201576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 175201577 . T . PASS END=175201589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr2 175201590 . C . PASS END=175201590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr2 175201591 . T . PASS END=175201597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 175201598 . C . LowGQ END=175201598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,255:12,0,255:7,0 chr2 175201599 . G . PASS END=175201603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 175201604 . T . LowGQ END=175201605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,2:9:0:9:0,0,216:6,0,222:7,0 chr2 175201606 . C . PASS END=175201609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,274:0,27,255:9,0 chr2 175201610 . C . PASS END=175201611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:7,0 chr2 175201612 . T . PASS END=175201612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 175201613 . A . LowGQ END=175201613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,241:12,0,253:7,0 chr2 175201614 . T . PASS END=175201615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 175201616 . C . LowGQ END=175201616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,235:4,0,239:6,0 chr2 175201617 . G . PASS END=175201617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 175201618 . G . PASS END=175201622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:8:0,10,270:0,10,255:6,0 chr2 175201623 . C . PASS END=175201624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:5,0 chr2 175201625 . G . PASS END=175201625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,250:6,0 chr2 175201626 . C . PASS END=175201626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 175201627 . G . PASS END=175201628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 175201629 . C . PASS END=175201630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,117:0,1,117:5,0 chr2 175201631 . C . PASS END=175201631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 175201632 . C . LowGQ END=175201633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,78:0,0,93:5,0 chr2 175201634 . T . PASS END=175201635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 175201636 . G . PASS END=175201636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,125:0,1,125:5,0 chr2 175201637 . C . PASS END=175201637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 175201638 . A . LowGQ END=175201639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,100:0,0,115:5,0 chr2 175201640 . C . PASS END=175201641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 175201642 . G . LowGQ END=175201642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,111:13,0,123:5,0 chr2 175201643 . C . PASS END=175201644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 175201645 . G . PASS END=175201645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,161:0,1,161:5,0 chr2 175201646 . C . PASS END=175201647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 175201648 . G . LowGQ END=175201648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,122:15,0,137:4,0 chr2 175201649 . C . PASS END=175201651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr2 175201652 . G . PASS END=175201652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,155:0,1,155:4,0 chr2 175201653 . C . PASS END=175201653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:5,0 chr2 175201654 . G . LowGQ END=175201656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,114:0,0,129:4,0 chr2 175201657 . A . PASS END=175201658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 175201659 . G . PASS END=175201659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr2 175201660 . A . PASS END=175201662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,158:0,18,158:6,0 chr2 175201663 . T . PASS END=175201663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,147:0,1,147:4,0 chr2 175201664 . C . PASS END=175201666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr2 175201667 . G . PASS END=175201667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 175201668 . C . PASS END=175201671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,188:5,0 chr2 175201672 . G . LowGQ END=175201672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,141:13,0,154:5,0 chr2 175201673 . C . PASS END=175201676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,194:0,18,188:6,0 chr2 175201677 . T C, 25.24 PASS DP=5;MQ=238.58;MQRankSum=0.731;ReadPosRankSum=0.731;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:1,4,0:0.800,0.000:5:0,0,0:1,4,0:23:60,0,24,114,36,150:131,0,21:1,0:2.5241e+01,2.1131e-02,2.7300e+01,1.1425e+02,7.0643e+01,1.5310e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,0,0,4:0,1,4,0 chr2 175201678 . G . PASS END=175201678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 175201679 . C . PASS END=175201702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,202:0,18,202:6,0 chr2 175201703 . G . PASS END=175201704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 175201705 . T . PASS END=175201707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 175201708 . G . PASS END=175201708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:6,0 chr2 175201709 . C . PASS END=175201712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,255:6,0 chr2 175201713 . C . PASS END=175201714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 175201715 . G . PASS END=175201731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:7,0 chr2 175201732 . A . PASS END=175201769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:13,0 chr2 175201770 . G . PASS END=175201784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:15,0 chr2 175201785 . G . PASS END=175201785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 175201786 . A . PASS END=175201800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:18,0 chr2 175201801 . G . PASS END=175201826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 175201827 . C . PASS END=175201844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 175201845 . G . PASS END=175201848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 175201849 . A . PASS END=175201849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,621:0,43,255:19,0 chr2 175201850 . C . PASS END=175201852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 175201853 . C . PASS END=175201863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 175201864 . G . PASS END=175201871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,775:0,60,255:22,0 chr2 175201872 . G . PASS END=175201900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,50,255:17,0 chr2 175201901 . T . PASS END=175201901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 175201902 . G . PASS END=175201930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,651:0,48,255:17,0 chr2 175201931 . T . PASS END=175201931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 175201932 . C . PASS END=175201939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 175201940 . C . PASS END=175201940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 175201941 . G . PASS END=175201942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 175201943 . A . PASS END=175201951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 175201952 . A . PASS END=175201961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr2 175201962 . G . PASS END=175201965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 175201966 . A . PASS END=175201995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,499:0,45,255:15,0 chr2 175201996 . C . PASS END=175201997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 175201998 . G . PASS END=175201998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:13,0 chr2 175201999 . G . PASS END=175202000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 175202001 . G . PASS END=175202002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 175202003 . G . PASS END=175202003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:13,0 chr2 175202004 . C . PASS END=175202004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 175202005 . A . PASS END=175202011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 175202012 . G . PASS END=175202012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 175202013 . C . PASS END=175202014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 175202015 . T . PASS END=175202016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,458:0,26,255:12,0 chr2 175202017 . A . PASS END=175202017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 175202018 . T . PASS END=175202018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,425:0,25,255:12,0 chr2 175202019 . G . PASS END=175202019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 175202020 . C . PASS END=175202025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr2 175202026 . G . PASS END=175202026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 175202027 . A . PASS END=175202042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,432:0,45,255:15,0 chr2 175202043 . C . PASS END=175202043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:15,0 chr2 175202044 . A . PASS END=175202051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 175202052 . G . PASS END=175202052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,397:0,15,255:14,0 chr2 175202053 . C . PASS END=175202063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,479:0,48,255:16,0 chr2 175202064 . C . PASS END=175202064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:16,0 chr2 175202065 . G . PASS END=175202075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,552:0,51,255:17,0 chr2 175202076 . A . PASS END=175202076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 175202077 . A . PASS END=175202089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,566:0,48,255:16,0 chr2 175202090 . G . PASS END=175202091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr2 175202092 . G . PASS END=175202105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 175202106 . C . PASS END=175202106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 175202107 . A . PASS END=175202107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 175202108 . A . PASS END=175202120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:12,0 chr2 175202121 . C . PASS END=175202121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 175202122 . C . PASS END=175202129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 175202130 . A . PASS END=175202143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr2 175202144 . T . PASS END=175202157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:5:0,12,180:0,15,172:5,0 chr2 175202158 . G . LowDepth END=175202268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:1,0:1:3:1:0,3,16:0,3,16:3,0 chr2 175213225 . T . PASS END=175213447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:34:0,84,1164:0,84,255:40,0 chr2 175213448 . C . PASS END=175213448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,7:55:48:55:0,48,1499:0,48,255:40,0 chr2 175213449 . T . PASS END=175213900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,115,1800:0,115,255:40,2 chr2 175215388 . C . PASS END=175215473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:76:0,120,1800:0,167,255:40,0 chr2 175216347 . C . PASS END=175216448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:37:0,93,1315:0,101,255:40,0 chr2 175216449 . T . PASS END=175216449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:32,0 chr2 175216450 . G . PASS END=175216453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:34:0,96,1440:0,102,255:32,0 chr2 175243651 . C . PASS END=175243752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:39:0,84,1260:0,90,255:40,0 chr2 175243753 . A . PASS END=175243768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:26:0,68,1022:0,68,255:26,0 chr2 175244930 . C . PASS END=175244978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,186,255:40,0 chr2 175245379 . T . PASS END=175245443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:50:0,120,1800:0,149,255:40,0 chr2 175245532 . C . PASS END=175245542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:95:0,120,1800:0,255,255:40,0 chr2 175246432 . C . PASS END=175246432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:75:0,120,1800:0,187,255:40,2 chr2 175246433 . T . PASS END=175246500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:67:0,120,1800:0,153,255:40,2 chr2 175246501 . G . PASS END=175246505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:57:0,120,1800:0,157,255:40,0 chr2 175252413 . C . PASS END=175252507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,176,255:40,0 chr2 175260279 . T . PASS END=175260350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,139,255:40,0 chr2 175260485 . A . PASS END=175260494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 175260495 . T . PASS END=175260495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 175260496 . G . PASS END=175260499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 175260500 . A . PASS END=175260500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 175260501 . C . PASS END=175260505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 175260506 . C . PASS END=175260542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,939:0,62,255:26,0 chr2 175260543 . C . PASS END=175260545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 175260904 . A . PASS END=175260908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,120,1800:0,126,255:40,0 chr2 175260909 . A T, 49.96 PASS DP=45;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=2.963;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:9,13,0:14,9,0:48:85,0,50,787,811,1597:255,0,255:23,0:4.9957e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,11,11:8,15,10,12 chr2 175260910 . G . PASS END=175260946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,118,1592:0,118,255:40,0 chr2 175260947 . A . PASS END=175260954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,117,1755:0,141,255:40,0 chr2 175263003 . T . PASS END=175263161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:84:42:0,84,1260:0,118,255:40,0 chr2 175263162 . C . PASS END=175263170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:40:0,72,1080:0,110,255:26,0 chr2 175264650 . T . PASS END=175264650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:27,0 chr2 175264651 . G . PASS END=175264651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,933:0,24,255:29,0 chr2 175264652 . T . PASS END=175264652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr2 175264653 . A . PASS END=175264653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 175264654 . C . PASS END=175264654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1166:0,75,255:33,0 chr2 175264655 . A . PASS END=175264657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1264:0,92,255:35,0 chr2 175264658 . T . PASS END=175264658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1219:0,77,255:35,0 chr2 175264659 . A . PASS END=175264659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 175264660 . T . PASS END=175264660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1188:0,53,255:34,0 chr2 175264661 . A . PASS END=175264661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1274:0,91,255:35,0 chr2 175264662 . G . PASS END=175264662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1113:0,75,255:33,0 chr2 175264663 . A . PASS END=175264673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1130:0,88,255:34,0 chr2 175264674 . G . PASS END=175264674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1190:0,74,255:32,0 chr2 175264675 . T . PASS END=175264675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 175264676 . T . PASS END=175264676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1047:0,66,255:31,0 chr2 175264677 . C . PASS END=175264678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:34,0 chr2 175264679 . T . PASS END=175264680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:35,0 chr2 175264681 . A . PASS END=175264681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1154:0,50,255:33,0 chr2 175264682 . A . PASS END=175264812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:36:0,81,1215:0,94,255:40,0 chr2 175264813 . T . PASS END=175264815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:35:0,78,1170:0,105,255:26,0 chr2 175264816 . G . PASS END=175264817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:27,0 chr2 175264818 . A . PASS END=175264818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:25,0 chr2 175264819 . T . PASS END=175264821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 175264822 . A . PASS END=175264831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 175265718 . A . PASS END=175265723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,809:0,72,255:25,0 chr2 175265724 . C . PASS END=175265724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 175265725 . C . PASS END=175265725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,882:0,48,255:25,0 chr2 175265726 . T . PASS END=175265739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,972:0,84,255:35,0 chr2 175265740 . A . PASS END=175265740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:24:36:0,24,799:0,24,255:30,0 chr2 175265741 . C . PASS END=175265889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:36:0,86,985:0,86,255:40,0 chr2 175265890 . A . PASS END=175265917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 175268831 . A . PASS END=175269006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:41:0,87,1305:0,97,255:40,0 chr2 175269007 . T . PASS END=175269027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:26,0 chr2 175269028 . C . PASS END=175269038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 175269039 . C . PASS END=175269040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 175269041 . A . PASS END=175269043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 175287613 . G . PASS END=175287775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,107,1332:0,107,255:40,0 chr2 175289203 . A . PASS END=175289221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1194:0,83,255:37,0 chr2 175289222 . A . PASS END=175289222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:35,0 chr2 175289223 . T . PASS END=175289276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,109,1436:0,109,255:40,0 chr2 175289277 . T . PASS END=175289313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,167,255:40,0 chr2 175289314 . T C, 236.14 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,33,0:0,30,0:186:274,189,0,2398,189,2398:255,192,0:0,0:2.3614e+02,1.8614e+02,0.0000e+00,4.5000e+02,2.2091e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,42:0,0,39,24 chr2 175289315 . G . PASS END=175289351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,125,255:40,0 chr2 175289352 . C . PASS END=175289377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:82:38:0,82,1293:0,82,255:40,0 chr2 175292441 . G . PASS END=175292533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:51:0,120,1800:0,153,255:40,0 chr2 175292534 . G . PASS END=175292579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:63:0,120,1800:0,155,255:40,1 chr2 175292580 . TTCAAATTTATCAG T, 208.28 PASS DP=63;MQ=250.00;FractionInformativeReads=0.841 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,53,0:1.000,0.000:53:0,31,0:0,22,0:158:240,161,0,2388,161,2388:255,0,255:16,65:2.0828e+02,1.5828e+02,0.0000e+00,4.5000e+02,1.9305e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,17,36:0,0,21,32 chr2 175292581 . T . LowGQ END=175292594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:17,65:82:0:62:0,0,0:255,0,255:40,65 chr2 175292595 . C . PASS END=175292598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,153,255:40,0 chr2 175292599 . T . LowGQ END=175292599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,15:62:0:62:0,0,1156:255,0,255:40,0 chr2 175292600 . T . PASS END=175292602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,162,255:40,0 chr2 175292603 . T . LowGQ END=175292606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,7:54:0:52:0,0,1476:38,0,255:40,0 chr2 175292607 . T . PASS END=175292607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 175292608 . C . PASS END=175292608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:45:51:0,45,1690:0,45,255:40,0 chr2 175292609 . A . PASS END=175292609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:51:0,120,1851:0,120,255:40,0 chr2 175292610 . A . PASS END=175292610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:37:51:0,37,1684:0,37,255:40,0 chr2 175292611 . A . PASS END=175292611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:72:50:0,72,1634:0,72,255:40,0 chr2 175292612 . G . PASS END=175292623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:92:47:0,92,1577:0,92,255:40,0 chr2 175300844 . T . PASS END=175300959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1139:0,80,255:40,0 chr2 175300960 . A . PASS END=175300996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1374:0,101,255:40,0 chr2 175300997 . G A, 169.93 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,25,0:0,16,0:120:208,123,0,1553,123,1553:255,123,0:0,0:1.6993e+02,1.1993e+02,0.0000e+00,4.5000e+02,1.5470e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,21:0,0,24,17 chr2 175300998 . T . PASS END=175301034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:38:0,96,1410:0,98,255:40,0 chr2 175301035 . T . PASS END=175301134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,88,255:40,0 chr2 175301135 . T . PASS END=175301144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:32:0,63,945:0,83,255:24,0 chr2 175304626 . C . PASS END=175304763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:34:0,93,1395:0,102,255:40,0 chr2 175306847 . C . PASS END=175306911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:99:0,120,1800:0,255,255:40,0 chr2 175309809 . C . PASS END=175309829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:69:0,120,1800:0,191,255:40,0 chr2 175309830 . A . PASS END=175309904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:59:0,120,1800:0,120,255:40,0 chr2 175311339 . A . PASS END=175311340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1090:0,93,255:31,0 chr2 175311341 . C . PASS END=175311341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 175311342 . G . PASS END=175311343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 175311344 . A . PASS END=175311344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,983:0,79,255:31,0 chr2 175311345 . C . PASS END=175311471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:32:0,86,1194:0,86,255:40,0 chr2 175311472 . T . PASS END=175311475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,77,255:26,0 chr2 175318465 . T . PASS END=175318562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:39:0,87,1347:0,87,255:40,0 chr2 175318563 . C . PASS END=175318563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:35,0 chr2 175318564 . A . PASS END=175318566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:40:0,87,1305:0,103,255:36,0 chr2 175318567 . A . PASS END=175318567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1324:0,70,255:27,0 chr2 175318568 . A . PASS END=175318569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:39:0,84,1260:0,87,255:29,0 chr2 175324606 . T . PASS END=175324614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 175324615 . G . PASS END=175324615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 175324616 . A . PASS END=175324622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,771:0,69,255:23,0 chr2 175324623 . C . PASS END=175324623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 175324624 . T . PASS END=175324645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:26,0 chr2 175324646 . T . PASS END=175324787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,1016:0,81,255:40,0 chr2 175324788 . C . PASS END=175324806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:25:0,60,900:0,65,255:26,0 chr2 175324807 . T . PASS END=175324816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,714:0,46,255:19,0 chr2 175326130 . C . PASS END=175326220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:61:0,120,1800:0,159,255:40,0 chr2 175326316 . C . PASS END=175326400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:79:0,120,1800:0,142,255:40,0 chr2 175330513 . C . PASS END=175330630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:41:0,99,1485:0,108,255:40,0 chr2 175331272 . C . PASS END=175331355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,114,1713:0,114,255:40,0 chr2 175333640 . C . PASS END=175333669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,111,1722:0,111,255:40,0 chr2 175333670 . A . PASS END=175333795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:33:0,93,1395:0,99,255:40,0 chr2 175335118 . A . PASS END=175335119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:30,0 chr2 175335120 . T . PASS END=175335120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 175335121 . T . PASS END=175335128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1034:0,90,255:30,0 chr2 175335129 . C . PASS END=175335132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,995:0,76,255:29,0 chr2 175335133 . G . PASS END=175335157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1097:0,82,255:39,0 chr2 175335158 . A . PASS END=175335158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr2 175335159 . C . PASS END=175335283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:41:0,85,1474:0,85,255:40,0 chr2 175337693 . A . PASS END=175337837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,111,1753:0,111,255:40,0 chr2 175337838 . C . PASS END=175337874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:52:0,90,1673:0,90,255:40,0 chr2 175337875 . G . LowGQ END=175337875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,11:58:0:58:0,0,1244:68,0,255:40,0 chr2 175337876 . C . PASS END=175337912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:53:0,120,1800:0,149,255:40,0 chr2 175337913 . C . PASS END=175338079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:37:0,81,999:0,81,255:40,0 chr2 175338080 . T . PASS END=175338080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:30,0 chr2 175338081 . A . PASS END=175338092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1305:0,93,255:31,0 chr2 175346225 . C . PASS END=175346225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 175346226 . T . PASS END=175346228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 175346229 . A . PASS END=175346229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr2 175346230 . G . PASS END=175346684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:31:0,80,1139:0,80,255:40,0 chr2 175426829 . T . PASS END=175426853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1395:0,105,255:36,0 chr2 175427275 . T . PASS END=175427330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:43:0,114,1651:0,116,255:40,0 chr2 175431772 . T . PASS END=175431911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:57:0,120,1800:0,138,255:40,0 chr2 175432589 . C . PASS END=175432600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,629:0,40,255:18,0 chr2 175432601 . A . PASS END=175432601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 175432602 . G . PASS END=175432629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr2 175432630 . G . PASS END=175432637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 175432638 . A . PASS END=175432638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 175432639 . G . PASS END=175432651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,908:0,72,255:25,0 chr2 175432652 . C . PASS END=175432653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 175432654 . C . PASS END=175432656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 175432657 . G . PASS END=175432668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 175432669 . T . PASS END=175432669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 175432670 . C . PASS END=175432693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1078:0,87,255:29,0 chr2 175432694 . C . PASS END=175432695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 175432696 . C . PASS END=175432741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1172:0,83,255:31,0 chr2 175432742 . C . PASS END=175432742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:28,0 chr2 175432743 . A . PASS END=175432745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:29,0 chr2 175432746 . C . PASS END=175432746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:28,0 chr2 175432747 . A . PASS END=175432765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr2 175432766 . C . PASS END=175432779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,858:0,64,255:26,0 chr2 175432780 . G . PASS END=175432780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,837:0,48,255:21,0 chr2 175432781 . G . PASS END=175432781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 175432782 . A . PASS END=175432801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:18:0,45,675:0,54,255:18,0 chr2 175436321 . T . PASS END=175436444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:34:0,86,1144:0,86,255:40,0 chr2 175436445 . T . PASS END=175436445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr2 175436446 . C . PASS END=175436446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1310:0,102,255:34,0 chr2 175436447 . A . PASS END=175436447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:32,0 chr2 175436448 . C . PASS END=175436452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:33,0 chr2 175436453 . C . PASS END=175436453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:30,0 chr2 175436454 . G . PASS END=175436464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1172:0,80,255:31,0 chr2 175436465 . A . PASS END=175436468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1092:0,77,255:26,0 chr2 175436469 . C . PASS END=175436484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:29,0 chr2 175436485 . A . PASS END=175436486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 175436487 . G . PASS END=175436493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 175436494 . G . PASS END=175436499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,1080:0,66,255:24,0 chr2 175436500 . T . PASS END=175436500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:25,0 chr2 175436501 . G . PASS END=175436502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 175436503 . A . PASS END=175436503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 175436504 . C . PASS END=175436505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 175436506 . A . PASS END=175436506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 175436507 . A . PASS END=175436509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 175436510 . G . PASS END=175436511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 175436512 . G . PASS END=175436514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 175436515 . A . PASS END=175436530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,933:0,67,255:26,0 chr2 175436531 . G . PASS END=175436531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:23,0 chr2 175436532 . A . PASS END=175436533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:25,0 chr2 175436534 . T . PASS END=175436534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,917:0,57,255:24,0 chr2 175436535 . C . PASS END=175436538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:25,0 chr2 175436539 . G . PASS END=175436539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:24,0 chr2 175436540 . G . PASS END=175436555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,925:0,62,255:25,0 chr2 175436556 . C . PASS END=175436556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 175436557 . T . PASS END=175436559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 175436560 . A . PASS END=175436560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 175436561 . A . PASS END=175436591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:22,0 chr2 175436592 . C . PASS END=175436598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr2 175436599 . G . PASS END=175436620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,721:0,60,255:20,0 chr2 175436621 . T . PASS END=175436654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,645:0,41,255:19,0 chr2 175436655 . G . PASS END=175436655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 175436656 . G . PASS END=175436674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 175436675 . A . PASS END=175436679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:37:18:0,37,585:0,37,255:14,0 chr2 175436680 . G . PASS END=175436682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 175436683 . G . PASS END=175436683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:13,0 chr2 175436684 . G . PASS END=175436685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,493:0,34,255:14,0 chr2 175436686 . G . PASS END=175436686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,413:0,15,255:11,0 chr2 175436687 . A . PASS END=175436695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:15:0,31,482:0,31,255:13,0 chr2 175436696 . C . PASS END=175436696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr2 175436697 . C . PASS END=175436697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,382:0,3,255:12,0 chr2 175436698 . T . PASS END=175436700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 175436701 . G . LowGQ END=175436702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr2 175436703 . A . PASS END=175436704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,352:0,22,255:12,0 chr2 175436705 . G . PASS END=175436707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr2 175436708 . G . PASS END=175436709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 175436710 . G . PASS END=175436710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 175436711 . C . PASS END=175436711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr2 175436712 . C . PASS END=175436712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,393:0,39,255:13,0 chr2 175436713 . T . PASS END=175436714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 175436715 . T . PASS END=175436717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 175436718 . C . PASS END=175436720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,402:0,22,255:12,0 chr2 175436721 . A . LowGQ END=175436722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,352:0,0,255:12,0 chr2 175436723 . T . PASS END=175436723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 175436724 . G . PASS END=175436731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 175436732 . T . PASS END=175436733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,437:0,28,255:14,0 chr2 175436734 . G . LowGQ END=175436735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,382:0,0,255:14,0 chr2 175436736 . G . PASS END=175436743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,454:0,45,255:15,0 chr2 175436744 . T . LowGQ END=175436744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,274:5,0,255:12,0 chr2 175436745 . T . PASS END=175436747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,505:0,45,255:15,0 chr2 175436748 . T . PASS END=175436748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:12,0 chr2 175436749 . C . PASS END=175436749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 175436750 . A . PASS END=175436750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:12,0 chr2 175436751 . T . PASS END=175436754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 175436755 . A . PASS END=175436755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr2 175436756 . G . PASS END=175436758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 175436759 . C . PASS END=175436759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,398:0,3,255:12,0 chr2 175436760 . C . PASS END=175436761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 175436762 . G . PASS END=175436763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 175436764 . T . PASS END=175436773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,527:0,31,255:13,0 chr2 175436774 . C . PASS END=175436774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 175436775 . G . PASS END=175436775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 175436776 . G . PASS END=175436776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 175436777 . C . PASS END=175436777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:14,0 chr2 175436778 . A . PASS END=175436788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr2 175436789 . G . PASS END=175436789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:12,0 chr2 175436790 . T . PASS END=175436800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 175436801 . C . PASS END=175436801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr2 175436802 . G . PASS END=175436809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 175436810 . G . PASS END=175436819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr2 175436820 . G . PASS END=175436856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:13:0,31,451:0,31,255:13,0 chr2 175436857 . G . PASS END=175436858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 175436859 . T . PASS END=175436883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,443:0,39,255:13,0 chr2 175436884 . G . PASS END=175436885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 175436886 . C . PASS END=175436898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 175436899 . G . PASS END=175436901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 175436902 . T . PASS END=175436902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 175436903 . G . PASS END=175436914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:12,0 chr2 175436915 . C . PASS END=175436924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:11:0,20,360:0,20,255:9,0 chr2 175436925 . G . PASS END=175436939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 175436940 . G A, 44.88 PASS DP=11;MQ=250.00;MQRankSum=2.262;ReadPosRankSum=2.262;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,3,0:0.273,0.000:11:3,1,0:5,2,0:44:80,0,50,107,286,393:83,0,255:8,0:4.4880e+01,1.6283e-04,5.3000e+01,1.0732e+02,3.2074e+02,3.9629e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,1,2:1,7,1,2 chr2 175436941 . G . PASS END=175436961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,374:0,33,255:12,0 chr2 175436962 . G . PASS END=175436965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:12:0,24,360:0,36,255:9,0 chr2 175436966 . A . PASS END=175436968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:10,0 chr2 175436969 . A . PASS END=175436969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 175436970 . G . PASS END=175436975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 175436976 . G . PASS END=175436976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 175436977 . G . PASS END=175436977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 175436978 . A . PASS END=175437006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,421:0,36,255:13,0 chr2 175437007 . C . PASS END=175437017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr2 175437018 . G . PASS END=175437097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,451:0,39,255:13,0 chr2 175437098 . A . PASS END=175437099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 175437100 . T . PASS END=175437100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 175437101 . T . PASS END=175437109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:17,0 chr2 175437110 . A . PASS END=175437110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 175437111 . A . PASS END=175437154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,599:0,51,255:18,0 chr2 175437155 . T . PASS END=175437155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 175437156 . G . PASS END=175437174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 175439632 . C . PASS END=175439658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:96:64:0,96,1440:0,131,255:40,0 chr2 175439659 . T . PASS END=175439662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:60:62:0,60,900:0,169,255:26,0 chr2 175439663 . G . PASS END=175439663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:57:62:0,57,855:0,186,255:19,0 chr2 175439664 . C . PASS END=175439664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:60:62:0,60,900:0,170,255:19,0 chr2 175439665 . T . PASS END=175439669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:45:57:0,45,675:0,138,255:18,0 chr2 175439932 . C . PASS END=175439940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,653:0,54,255:19,0 chr2 175439941 . T . PASS END=175439986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,670:0,60,255:26,0 chr2 175439987 . T . PASS END=175439989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 175439990 . C . PASS END=175439991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 175439992 . G . PASS END=175439992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 175439993 . A . PASS END=175439993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 175439994 . C . PASS END=175440003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:35,0 chr2 175440004 . C . PASS END=175440004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1105:0,75,255:32,0 chr2 175440005 . G . PASS END=175440046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1176:0,91,255:36,0 chr2 175440047 . G . PASS END=175440047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1356:0,76,255:35,0 chr2 175440048 . C . PASS END=175440075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,92,255:36,0 chr2 175440076 . C . PASS END=175440094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,75,255:26,0 chr2 175440095 . A . PASS END=175440095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr2 175440096 . G . PASS END=175440096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 175440097 . C . PASS END=175440107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr2 175440108 . T . PASS END=175440108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 175446038 . T . PASS END=175446167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:38:0,87,1305:0,97,255:40,0 chr2 175450251 . C . PASS END=175450251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 175450252 . A . LowGQ END=175450252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:9,0 chr2 175450253 . G . PASS END=175450253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 175450254 . T . PASS END=175450257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,396:0,22,255:12,0 chr2 175450258 . A . PASS END=175450258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 175450259 . A . PASS END=175450259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,240:0,22,240:11,0 chr2 175450260 . C . LowGQ END=175450260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,355:30,0,255:10,0 chr2 175450261 . G . PASS END=175450262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 175450263 . C . LowGQ END=175450263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,346:35,0,255:10,0 chr2 175450264 . G . PASS END=175450268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 175450269 . C . PASS END=175450269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:12,0 chr2 175450270 . G . PASS END=175450296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,454:0,42,255:16,0 chr2 175450297 . G . PASS END=175450297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 175450298 . G . PASS END=175450301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,545:0,48,255:16,0 chr2 175612353 . T . PASS END=175612353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 175612386 . C . PASS END=175612386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 175612391 . T . PASS END=175612391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 175612430 . C . PASS END=175612430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 175612438 . A . PASS END=175612438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 175612441 . C . PASS END=175612441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 175612469 . A . PASS END=175612469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 175612494 . G . PASS END=175612494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1504:0,117,255:39,0 chr2 175612542 . G . PASS END=175612542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:29,0 chr2 175612564 . C . PASS END=175612564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1156:0,83,255:27,0 chr2 175612577 . T . PASS END=175612577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 175612722 . T . PASS END=175612722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 175612751 . G . PASS END=175612751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,191,255:40,0 chr2 175612852 . T . PASS END=175612983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:43:0,108,1620:0,118,255:40,0 chr2 175612986 . G . PASS END=175612986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:35,0 chr2 175613308 . A . PASS END=175613308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,880:0,75,255:25,0 chr2 175613309 . T . PASS END=175613310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 175613311 . G . PASS END=175613317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,886:0,64,255:28,0 chr2 175613318 . T . PASS END=175613331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:30,0 chr2 175613332 . C . PASS END=175613332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 175613333 . A . PASS END=175613533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:30:0,81,1072:0,86,255:40,0 chr2 175613534 . G . PASS END=175613539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:30:0,72,1080:0,90,255:26,0 chr2 175613540 . A . PASS END=175613540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:25,1 chr2 175613541 . T . PASS END=175613541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:25,0 chr2 175613542 . A . PASS END=175613542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,884:0,40,255:23,0 chr2 175613543 . A . PASS END=175613546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 175613547 . C . PASS END=175613547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,850:0,53,255:23,0 chr2 175613550 . A . PASS END=175613550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 175614665 . C . PASS END=175614665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 175614674 . C . PASS END=175614675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 175614676 . T . PASS END=175614676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 175614677 . C . PASS END=175614683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr2 175614684 . C . PASS END=175614684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr2 175614685 . A . PASS END=175614685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,907:0,75,255:25,0 chr2 175614686 . G . PASS END=175614686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 175614687 . T . PASS END=175614687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 175614688 . T . PASS END=175614693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 175614694 . T . PASS END=175614694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 175614695 . G . PASS END=175614859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:29:0,87,1030:0,87,255:40,0 chr2 175614860 . A . PASS END=175614878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:42:0,81,1215:0,110,255:39,0 chr2 175614879 . C . PASS END=175614883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:63:42:0,63,945:0,113,255:26,0 chr2 175614884 . A . PASS END=175614886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:45:42:0,45,675:0,126,255:18,0 chr2 175614887 . C . PASS END=175614893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:30:40:0,30,450:0,108,255:13,0 chr2 175614894 . T . PASS END=175614897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:24:38:0,24,360:0,114,255:9,0 chr2 175614907 . C . PASS END=175614907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:15:37:0,15,225:0,111,255:5,0 chr2 175614908 . CAAA CA,CAA,C, 94.96 PASS DP=37;MQ=250.00;MQRankSum=2.810;ReadPosRankSum=-1.697;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:3,19,10,5,0:0.514,0.270,0.135,0.000:37:1,12,6,2,0:2,7,4,3,0:28:107,51,32,121,0,53,151,76,66,119,251,251,251,251,251:255,0,255:2,42:9.4965e+01,4.4965e+01,2.8524e+01,1.1480e+02,6.2876e-03,5.0006e+01,1.4456e+02,7.6090e+01,6.6129e+01,1.1613e+02,2.7333e+02,2.7933e+02,2.7933e+02,2.7933e+02,2.7634e+02:0.00,6.00,9.01,6.00,12.00,9.01,6.00,12.00,12.00,9.01,34.77,40.77,40.77,40.77,37.78:0,3,10,24:2,1,14,20 chr2 175618199 . T . PASS END=175618199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:91:43:0,91,1535:0,91,255:40,2 chr2 175618200 . C . PASS END=175618202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1527:0,63,255:40,2 chr2 175618203 . C . PASS END=175618335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:32:0,81,1215:0,86,255:40,0 chr2 175618336 . A . PASS END=175618371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,64,255:26,0 chr2 175618372 . A . PASS END=175618372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 175618373 . G . PASS END=175618382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:25,0 chr2 175618383 . G . PASS END=175618387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 175618388 . G . PASS END=175618430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,914:0,72,255:26,0 chr2 175618431 . C . PASS END=175618432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 175618433 . C . PASS END=175618448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr2 175618449 . A . PASS END=175618452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,65,255:19,0 chr2 175618453 . C . PASS END=175618457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 175618458 . T . PASS END=175618468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 175618947 . C . PASS END=175618948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:29,0 chr2 175618949 . G . PASS END=175618949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 175618950 . G . PASS END=175619087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1009:0,82,255:40,1 chr2 175619088 . A . PASS END=175619088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:76:37:0,76,1331:0,76,255:27,1 chr2 175619089 . G . PASS END=175619089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1340:0,59,255:28,0 chr2 175619090 . T . PASS END=175619102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:29,0 chr2 175619103 . C . PASS END=175619130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 175619131 . T . PASS END=175619137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,66,255:18,0 chr2 175619138 . C . PASS END=175619142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr2 175622294 . T . PASS END=175622404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,102,1471:0,104,255:40,0 chr2 175622674 . C . PASS END=175622674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 175622675 . T . PASS END=175622737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1156:0,88,255:36,0 chr2 175622738 . A . PASS END=175622748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,90,255:26,0 chr2 175624059 . C . PASS END=175624062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:86:0,120,1800:0,232,255:40,0 chr2 175624063 . T . PASS END=175624103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:81:0,120,1800:0,227,255:40,0 chr2 175624212 . T . PASS END=175624212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 175624216 . C . PASS END=175624425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:37:0,81,1193:0,81,255:40,0 chr2 175629080 . C . PASS END=175629111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1094:0,90,255:32,0 chr2 175629112 . C . PASS END=175629122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 175629159 . T . PASS END=175629159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 175637470 . T . PASS END=175637480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:16,0 chr2 175637481 . A . PASS END=175637493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,607:0,51,255:17,0 chr2 175637494 . C . PASS END=175637494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 175637495 . C . PASS END=175637499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 175637500 . T . PASS END=175637500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,619:0,27,255:17,0 chr2 175637501 . C . PASS END=175637513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 175637514 . C . PASS END=175637534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,782:0,63,255:26,0 chr2 175637535 . T . PASS END=175637544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:28,0 chr2 175637545 . G . PASS END=175637545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 175637546 . A . PASS END=175637602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1063:0,84,255:33,0 chr2 175637603 . A . PASS END=175637603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,853:0,76,255:30,0 chr2 175637604 . C . PASS END=175637634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1119:0,92,255:33,0 chr2 175637635 . G . PASS END=175637635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:31,0 chr2 175637636 . G . PASS END=175637661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1164:0,83,255:34,0 chr2 175637662 . A . PASS END=175637662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:30,0 chr2 175637663 . A . PASS END=175637672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 175637673 . G . PASS END=175637673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:30,0 chr2 175637674 . G . PASS END=175637691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 175637692 . C . PASS END=175637706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,61,255:26,0 chr2 175637707 . T . PASS END=175637707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 175640833 . C . PASS END=175640861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:37:0,108,1443:0,111,255:40,0 chr2 175640862 . A . PASS END=175640898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:45:0,109,1549:0,109,255:40,0 chr2 175640899 . T G, 50.00 PASS DP=51;MQ=249.69;MQRankSum=5.199;ReadPosRankSum=3.656;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,31,0:0.608,0.000:51:7,16,0:13,15,0:45:85,0,44,185,185,185:255,0,255:19,0:5.0000e+01,1.2788e-04,4.7115e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,12,14,17:11,9,17,14 chr2 175640900 . G . PASS END=175640936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,101,1800:0,101,255:40,0 chr2 175640937 . G . PASS END=175640963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:32:0,81,1215:0,82,255:40,0 chr2 175640964 . C . PASS END=175640966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,80,255:26,0 chr2 175640967 . C . PASS END=175640968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 175640969 . A . PASS END=175640980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,940:0,70,255:26,0 chr2 175640981 . A . PASS END=175640983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 175640984 . G . PASS END=175640994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,976:0,68,255:26,0 chr2 175646640 . C . PASS END=175646661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1083:0,89,255:35,0 chr2 175646662 . G . PASS END=175646750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1169:0,80,255:40,0 chr2 175646751 . C . PASS END=175646755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 175646991 . T . PASS END=175646992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 175646993 . C . PASS END=175647010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,574:0,45,255:19,0 chr2 175647011 . C . PASS END=175647016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,831:0,66,255:26,0 chr2 175647017 . T . PASS END=175647017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:24,0 chr2 175647018 . G . PASS END=175647026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr2 175647027 . C . PASS END=175647027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 175647028 . C . PASS END=175647030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 175647031 . A . PASS END=175647032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:28,0 chr2 175647033 . A . LowGQ END=175647033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:0:34:0,0,1022:8,0,255:26,1 chr2 175647034 . G . PASS END=175647034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1194:0,31,255:31,0 chr2 175647035 . A . PASS END=175647037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:31,0 chr2 175647038 . G . PASS END=175647042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1239:0,86,255:34,0 chr2 175647043 . C . PASS END=175647043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:33,0 chr2 175647044 . C . PASS END=175647067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1266:0,81,255:38,0 chr2 175647068 . T . PASS END=175647068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1226:0,72,255:36,0 chr2 175647069 . C . PASS END=175647069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1410:0,111,255:37,0 chr2 175647070 . T . PASS END=175647070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,1025:0,44,255:33,0 chr2 175647071 . C . PASS END=175647078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1177:0,94,255:37,0 chr2 175647079 . T . PASS END=175647079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr2 175647080 . C . PASS END=175647104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1256:0,80,255:37,0 chr2 175647105 . C . PASS END=175647105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:33,0 chr2 175647106 . A . PASS END=175647122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1150:0,85,255:34,0 chr2 175664088 . G . PASS END=175664088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,238,255:40,0 chr2 175664152 . A . PASS END=175664152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 175664209 . T . PASS END=175664209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 175664236 . T . PASS END=175664236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 175664280 . C . PASS END=175664280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1158:0,85,255:32,0 chr2 175664418 . G . PASS END=175664418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 175664422 . G . PASS END=175664422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 175664507 . C . PASS END=175664507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1629:0,119,255:40,0 chr2 175664535 . C . PASS END=175664535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 175664588 . G . PASS END=175664588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 175664592 . G . PASS END=175664592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 175664629 . T . PASS END=175664629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 175664646 . T . PASS END=175664646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 175664690 . C . PASS END=175664690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 175664792 . A . PASS END=175664792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:90:0,120,1800:0,237,255:40,0 chr2 175664844 . T . PASS END=175664987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:41:0,110,1527:0,110,255:40,0 chr2 175664988 . A . PASS END=175664988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1457:0,79,255:35,0 chr2 175664989 . A . PASS END=175665015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1293:0,114,255:38,0 chr2 175666435 . C . PASS END=175666540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:34:0,102,1288:0,102,255:40,0 chr2 175670253 . C . PASS END=175670264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:22,0 chr2 175670265 . A . PASS END=175670265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 175670266 . G . PASS END=175670268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 175670269 . A . PASS END=175670269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 175670270 . G . PASS END=175670272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr2 175670273 . G . PASS END=175670274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 175670275 . C . PASS END=175670278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:24,0 chr2 175670279 . A . PASS END=175670279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 175670280 . A . PASS END=175670287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,838:0,72,255:25,0 chr2 175670288 . C . PASS END=175670288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 175670289 . A . PASS END=175670333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,826:0,75,255:25,0 chr2 175670334 . A . PASS END=175670365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr2 175670366 . G . PASS END=175670381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:13:0,36,482:0,39,255:13,0 chr2 175673633 . T . PASS END=175673770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:44:0,99,1416:0,101,255:40,0 chr2 175676233 . A . PASS END=175676233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,189,255:40,0 chr2 175676239 . C . PASS END=175676316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:65:0,120,1800:0,165,255:40,0 chr2 175677037 . C . PASS END=175677202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:35:0,99,1485:0,105,255:40,0 chr2 175677203 . A . PASS END=175677203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1014:0,71,255:31,0 chr2 175677204 . C . PASS END=175677210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr2 175689162 . C . PASS END=175689189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,119,1673:0,119,255:40,0 chr2 175689190 . A . PASS END=175689190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1744:0,79,255:40,0 chr2 175689191 . C . PASS END=175689206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,104,1787:0,104,255:40,0 chr2 175689207 . C . PASS END=175689231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,99,255:40,0 chr2 175689232 . T . PASS END=175689246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:32:0,60,1080:0,60,255:26,0 chr2 175689249 . G . LowGQ END=175689249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,776:71,0,255:25,8 chr2 175689261 . G . PASS END=175689261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1001:0,41,255:28,0 chr2 175711037 . G . PASS END=175711117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:57:0,120,1800:0,153,255:40,0 chr2 175711608 . C . PASS END=175711608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 175711609 . T . PASS END=175711609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr2 175711610 . T . PASS END=175711610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 175711611 . G . PASS END=175711611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 175711612 . A . PASS END=175711786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1121:0,80,255:40,0 chr2 175711787 . G . PASS END=175711787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:29,0 chr2 175711788 . G . PASS END=175711808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1162:0,81,255:31,0 chr2 175711809 . A . PASS END=175711810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 175711811 . C . PASS END=175711813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 175711814 . C . PASS END=175711844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,847:0,67,255:24,0 chr2 175711845 . C . PASS END=175711859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr2 175712447 . T . PASS END=175712453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,116,1598:0,116,255:40,0 chr2 175712454 . C . PASS END=175712454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:17:45:0,17,1157:0,17,255:38,0 chr2 175712455 . T . PASS END=175712455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1574:0,102,255:39,0 chr2 175712456 . G . PASS END=175712456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:49:45:0,49,1354:0,49,255:37,0 chr2 175712457 . T . PASS END=175712459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:45:0,85,1472:0,85,255:38,0 chr2 175712460 . C . LowGQ END=175712460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,11:45:0:45:0,0,861:84,0,255:27,0 chr2 175712461 . T . PASS END=175712461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,108,1620:0,135,255:36,0 chr2 175712462 . C . LowGQ END=175712462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,7:45:0:45:0,0,1073:4,0,255:29,0 chr2 175712463 . C . PASS END=175712463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:12:45:0,12,1053:0,12,255:30,0 chr2 175712464 . C . PASS END=175712464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1186:0,68,255:32,0 chr2 175712465 . T . LowGQ END=175712465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:0:45:0,0,1282:7,0,255:31,0 chr2 175712466 . C . PASS END=175712466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,105,1575:0,135,255:35,0 chr2 175712467 . C . PASS END=175712468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1271:0,60,255:34,0 chr2 175712469 . C . PASS END=175712469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:82:44:0,82,1358:0,82,255:32,0 chr2 175712470 . T . PASS END=175712470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:51:44:0,51,1343:0,51,255:31,0 chr2 175712471 . C . PASS END=175712471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,5:42:15:42:0,15,1188:0,15,255:32,0 chr2 175712472 . A . PASS END=175712472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1214:0,76,255:29,0 chr2 175712473 . T . PASS END=175712473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:93:42:0,93,1358:0,93,255:29,0 chr2 175740549 . T . PASS END=175740551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1094:0,87,255:29,0 chr2 175740552 . A . PASS END=175740552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 175740553 . G . PASS END=175740568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1080:0,87,255:30,0 chr2 175740569 . T . PASS END=175740587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:22:0,60,900:0,63,255:26,0 chr2 175740588 . T . PASS END=175740588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 175740589 . G . PASS END=175740590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 175740591 . C . PASS END=175740592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 175740593 . C . PASS END=175740593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 175742568 . C . PASS END=175742600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:38:0,87,1311:0,87,255:40,0 chr2 175742601 . A . PASS END=175742601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:76:59:0,76,1529:0,76,255:40,0 chr2 175742602 . T . PASS END=175742856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:31:0,81,1215:0,93,255:40,0 chr2 175779786 . C . PASS END=175779899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:32:0,86,1176:0,86,255:40,0 chr2 175779903 . A . PASS END=175779903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 175783262 . T . PASS END=175783293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:72:0,120,1800:0,183,255:40,0 chr2 175805572 . C . PASS END=175805622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,111,1599:0,111,255:40,0 chr2 175809616 . C . PASS END=175809671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:64:0,120,1800:0,176,255:40,0 chr2 175816892 . A . PASS END=175816930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:87:0,120,1800:0,231,255:40,0 chr2 175869622 . C . PASS END=175869640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:12,0 chr2 175869663 . C . PASS END=175869663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 175869676 . G . PASS END=175869676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 175869744 . G . PASS END=175869744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,286:0,24,255:8,0 chr2 175869800 . G . PASS END=175869800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 175869846 . C . PASS END=175869846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 175869911 . A . PASS END=175869911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 175869938 . G . PASS END=175869938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 175869993 . G . PASS END=175869993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:3:0,3,45:0,9,116:1,0 chr2 175922382 . A . PASS END=175922382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 175939337 . T . PASS END=175939344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1180:0,85,255:37,0 chr2 175939345 . C . PASS END=175939345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:37,0 chr2 175939346 . T . PASS END=175939347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1350:0,100,255:37,0 chr2 175939348 . A . PASS END=175939348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr2 175939349 . G . PASS END=175939563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:38:0,111,1665:0,114,255:40,0 chr2 175939588 . T . PASS END=175939595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:59:0,120,1800:0,164,255:40,0 chr2 175945388 . T . PASS END=175945493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:49:0,120,1800:0,137,255:40,0 chr2 175957342 . T . PASS END=175957344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:91:0,120,1800:0,255,255:40,0 chr2 175957789 . C . PASS END=175957975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:37:0,80,1305:0,80,255:40,0 chr2 175957976 . G . PASS END=175957994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,60,255:25,0 chr2 175957995 . C . PASS END=175957995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr2 175962172 . C . PASS END=175962184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,898:0,62,255:26,0 chr2 175962185 . G . PASS END=175962196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:30,0 chr2 175962197 . G . PASS END=175962197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr2 175962198 . G . PASS END=175962199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 175962200 . T . PASS END=175962200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr2 175962201 . G . PASS END=175962201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr2 175962202 . T . PASS END=175962202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1147:0,47,255:32,0 chr2 175962203 . T . PASS END=175962203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr2 175962204 . G . PASS END=175962272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,84,255:38,0 chr2 175962273 . C . PASS END=175962296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,945:0,62,255:26,0 chr2 175962297 . G . PASS END=175962297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 175962298 . C . PASS END=175962299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,947:0,75,255:25,0 chr2 175962300 . G . PASS END=175962300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:21,0 chr2 175962301 . G . PASS END=175962309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr2 175962310 . A . PASS END=175962321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:19:0,54,706:0,55,255:19,0 chr2 175976296 . C . PASS END=175976382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:37:0,81,1215:0,94,255:40,0 chr2 175978722 . T . PASS END=175978831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:41:0,81,1215:0,110,255:40,0 chr2 175978832 . C . PASS END=175978835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:63:37:0,63,945:0,75,255:21,0 chr2 175978836 . G . PASS END=175978836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:57:37:0,57,855:0,95,255:18,0 chr2 175979414 . T . PASS END=175979420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,592:0,44,255:19,0 chr2 175979421 . A . PASS END=175979428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:23,0 chr2 175979429 . G . PASS END=175979434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,985:0,84,255:28,0 chr2 175979435 . G . PASS END=175979435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 175979436 . G . PASS END=175979596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1125:0,88,255:40,0 chr2 175982718 . C . PASS END=175982725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1180:0,85,255:34,0 chr2 175982726 . C . PASS END=175982726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:34,0 chr2 175982727 . A . PASS END=175982846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:92:36:0,92,1246:0,92,255:40,0 chr2 175982979 . T . PASS END=175983097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:96:38:0,96,1440:0,107,255:40,0 chr2 175986172 . C . PASS END=175986268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,113,1574:0,113,255:40,0 chr2 175994866 . C . PASS END=175994929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:53:0,120,1800:0,159,255:40,0 chr2 175994930 . T . PASS END=175994935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:60:0,120,1800:0,179,255:40,0 chr2 176001140 . C . PASS END=176001171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:76:0,120,1800:0,198,255:40,0 chr2 176043016 . T . PASS END=176043130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:39:0,93,1433:0,93,255:40,0 chr2 176043781 . T . PASS END=176043973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:34:0,81,1215:0,95,255:40,0 chr2 176043974 . G . PASS END=176043978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:29:0,78,1170:0,87,255:26,0 chr2 176044826 . C . PASS END=176044906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:33:0,87,1241:0,98,255:40,0 chr2 176046083 . C . PASS END=176046084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:19,0 chr2 176046085 . G . PASS END=176046089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 176046090 . G . PASS END=176046121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,659:0,41,255:19,0 chr2 176794695 . C . PASS END=176794927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:36:0,87,1308:0,87,255:40,1 chr2 176800436 . C . PASS END=176800518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:89:0,120,1800:0,234,255:40,0 chr2 176802072 . C . PASS END=176802239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:34:0,81,1215:0,86,255:40,0 chr2 176802240 . A . PASS END=176802242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:34:0,75,1125:0,86,255:25,0 chr2 176803041 . C . PASS END=176803111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:60:0,108,1620:0,164,255:40,0 chr2 176804280 . C . PASS END=176804385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,108,1620:0,118,255:40,0 chr2 176812208 . C . PASS END=176812210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr2 176812211 . T . PASS END=176812211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 176812212 . T . PASS END=176812212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 176812213 . C . PASS END=176812214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:27,0 chr2 176812215 . A . PASS END=176812215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr2 176812216 . G . PASS END=176812216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 176812217 . G . PASS END=176812217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 176812218 . C . PASS END=176812220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:32,0 chr2 176812221 . T . PASS END=176812221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:31,0 chr2 176812222 . G . PASS END=176812257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1131:0,80,255:36,0 chr2 176812258 . T . PASS END=176812258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1082:0,77,255:35,0 chr2 176812259 . T . PASS END=176812261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1305:0,95,255:37,0 chr2 176812262 . A . PASS END=176812262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:35,0 chr2 176812263 . T . PASS END=176812373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:31:0,81,1215:0,90,255:40,0 chr2 176812374 . T . PASS END=176812374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 176812375 . G . PASS END=176812384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,985:0,84,255:28,0 chr2 176812385 . A . PASS END=176812385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:27,0 chr2 176812386 . A . PASS END=176812389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 176812390 . T . PASS END=176812401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,897:0,67,255:26,0 chr2 176812402 . G . PASS END=176812402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 176812403 . C . PASS END=176812420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 176829100 . C . PASS END=176829151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:45:0,96,1584:0,96,255:40,0 chr2 176829234 . C . PASS END=176829317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:70:0,120,1800:0,193,255:40,0 chr2 176832350 . C . PASS END=176832352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:64:0,120,1800:0,179,255:40,0 chr2 176835492 . T . PASS END=176835532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:98:0,120,1800:0,255,255:40,0 chr2 176844538 . T . PASS END=176844596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:83:0,120,1800:0,200,255:40,0 chr2 176856959 . A . PASS END=176857146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:56:0,120,1800:0,154,255:40,1 chr2 176857910 . C . PASS END=176857951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:86:0,120,1800:0,213,255:40,0 chr2 176860281 . C . PASS END=176860374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:67:0,120,1800:0,194,255:40,0 chr2 176866888 . C . PASS END=176866888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 176866889 . T . PASS END=176866978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,948:0,80,255:38,0 chr2 176866979 . G . PASS END=176866979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:35,0 chr2 176866980 . C . PASS END=176867007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,82,255:37,0 chr2 176867008 . C . PASS END=176867018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1016:0,71,255:26,0 chr2 176944835 . T . PASS END=176944866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,149:0,15,149:6,0 chr2 176944867 . C . PASS END=176944867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr2 176944868 . C . PASS END=176944877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,202:6,0 chr2 176944878 . A . PASS END=176944878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 176944879 . C . PASS END=176944883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:5,0 chr2 176944884 . G . PASS END=176944958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,189:0,21,189:9,0 chr2 176944959 . T . PASS END=176944996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,202:6,0 chr2 176944997 . G . LowGQ END=176944997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:4,0 chr2 176944998 . C . PASS END=176945002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,210:4,0 chr2 176945003 . A . PASS END=176945009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:5:0,9,135:0,15,188:3,0 chr2 176945010 . C . PASS END=176945011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,194:4,0 chr2 176945012 . G . LowGQ END=176945201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:0:0,0,0:0,0,0:3,0 chr2 176945202 . C . PASS END=176945237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:6,0 chr2 176945238 . A . PASS END=176945243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr2 176945244 . G . PASS END=176945252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 176945253 . A . PASS END=176945253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 176945254 . A . PASS END=176945255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 176945256 . C . PASS END=176945257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 176945258 . A . PASS END=176945260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 176945261 . C . PASS END=176945276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 176945277 . G . PASS END=176945291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,678:0,60,255:22,0 chr2 176945292 . A . PASS END=176945292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:21,0 chr2 176945293 . G . PASS END=176945309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:23,0 chr2 176945310 . A . PASS END=176945310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 176945311 . G . PASS END=176945314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 176945315 . C . PASS END=176945315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 176945316 . C . PASS END=176945320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr2 176945321 . G . PASS END=176945321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 176945322 . G . PASS END=176945374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,845:0,63,255:24,0 chr2 176945375 . G . PASS END=176945379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 176945380 . C . PASS END=176945382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176945383 . C . PASS END=176945454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr2 176945455 . T . PASS END=176945456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr2 176945457 . G . PASS END=176945481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 176945482 . T . PASS END=176945482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 176945483 . G . PASS END=176945540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,568:0,40,255:18,0 chr2 176945541 . T . PASS END=176945541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 176945542 . T . PASS END=176945549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 176945550 . C . PASS END=176945554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr2 176945555 . C . PASS END=176945566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,574:0,48,255:16,0 chr2 176946906 . C . PASS END=176946914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,202:0,18,202:6,0 chr2 176946915 . G . PASS END=176946927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 176946928 . T . PASS END=176946928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:6,0 chr2 176946929 . T . PASS END=176946930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 176946931 . A . PASS END=176946961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:6,0 chr2 176946962 . G . PASS END=176946987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 176946988 . T . PASS END=176947021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,337:0,30,255:11,0 chr2 176947022 . A . PASS END=176947022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 176947023 . C . PASS END=176947067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr2 176947068 . A . PASS END=176947069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 176947070 . C . PASS END=176947095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 176947096 . C . PASS END=176947097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 176947098 . G . PASS END=176947098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 176947099 . C . PASS END=176947099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 176947100 . T . PASS END=176947100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,437:0,6,255:14,0 chr2 176947101 . G . PASS END=176947131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:16,0 chr2 176947132 . G . PASS END=176947161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,435:0,36,255:13,0 chr2 176947162 . C . PASS END=176947165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 176947166 . T . PASS END=176947177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 176948078 . C . PASS END=176948099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,202:6,0 chr2 176948100 . C . PASS END=176948100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:4,0 chr2 176948101 . T . PASS END=176948107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,210:6,0 chr2 176948108 . C . PASS END=176948126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:9,0 chr2 176948127 . G . PASS END=176948133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 176948134 . G . PASS END=176948140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 176948141 . A . PASS END=176948141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:7,0 chr2 176948142 . G . PASS END=176948146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 176948147 . C . PASS END=176948154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 176948155 . T . PASS END=176948158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 176948159 . T . PASS END=176948159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 176948160 . G . PASS END=176948203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,537:0,40,255:19,0 chr2 176948204 . T . PASS END=176948205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,640:0,60,255:20,0 chr2 176948206 . T . PASS END=176948206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 176948207 . T . PASS END=176948229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr2 176948230 . A . PASS END=176948230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 176948231 . T . PASS END=176948234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 176948235 . G . PASS END=176948235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 176948236 . G . PASS END=176948241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 176948242 . A . PASS END=176948242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:21,0 chr2 176948243 . C . PASS END=176948253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,748:0,66,255:22,0 chr2 176948254 . C . PASS END=176948254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 176948255 . T . PASS END=176948256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 176948257 . C . PASS END=176948257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 176948258 . C . PASS END=176948262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 176948263 . T . PASS END=176948263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 176948264 . G . PASS END=176948272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 176948273 . T . PASS END=176948273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 176948274 . G . PASS END=176948286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,893:0,62,255:26,0 chr2 176948287 . A . PASS END=176948287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:25,0 chr2 176948288 . T . PASS END=176948288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 176948289 . T . PASS END=176948316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr2 176948317 . C . PASS END=176948325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1141:0,80,255:30,0 chr2 176948326 . C . PASS END=176948327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1131:0,77,255:26,0 chr2 176948328 . G . PASS END=176948349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 176948350 . C . PASS END=176948353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:25,0 chr2 176948354 . G . PASS END=176948355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 176948356 . C . PASS END=176948364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:64:27:0,64,939:0,64,255:26,0 chr2 176948365 . G . PASS END=176948365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176948366 . C . PASS END=176948367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 176948368 . G . PASS END=176948368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176948369 . G . PASS END=176948372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 176948373 . C . PASS END=176948373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr2 176948374 . T . PASS END=176948375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 176948376 . C . PASS END=176948376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:25,0 chr2 176948377 . G . PASS END=176948381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr2 176948382 . T . PASS END=176948384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176948385 . C . PASS END=176948388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 176948389 . G . PASS END=176948394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 176948395 . A . PASS END=176948406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 176948407 . C . PASS END=176948407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:23,0 chr2 176948408 . C . PASS END=176948416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,947:0,62,255:26,0 chr2 176948417 . T . PASS END=176948417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 176948418 . G . PASS END=176948423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,911:0,62,255:26,0 chr2 176948424 . A . PASS END=176948424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,872:0,47,255:24,0 chr2 176948425 . T . PASS END=176948431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,856:0,61,255:25,0 chr2 176948432 . A . PASS END=176948432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:23,0 chr2 176948433 . T . PASS END=176948446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,765:0,61,255:25,0 chr2 176948447 . T . PASS END=176948456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:20:0,44,712:0,44,255:19,0 chr2 176948457 . C . PASS END=176948472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:13:0,33,495:0,39,255:13,0 chr2 176948473 . A . PASS END=176948473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 176948474 . G . PASS END=176948486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:11,0 chr2 176948487 . T . PASS END=176948487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 176948488 . C . PASS END=176948489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 176948490 . T . LowGQ END=176948490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,217:17,0,234:7,0 chr2 176948491 . A . PASS END=176948493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 176948494 . C . PASS END=176948498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 176948499 . C . PASS END=176948499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,341:0,2,255:8,0 chr2 176948500 . A . PASS END=176948502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:7,0 chr2 176948503 . A . PASS END=176948504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 176952670 . A . PASS END=176952675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:8,0 chr2 176952676 . G . PASS END=176952676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr2 176952677 . C . PASS END=176952680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 176952681 . T . LowGQ END=176952681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:7,0,239:7,0 chr2 176952682 . A . PASS END=176952683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 176952684 . T . PASS END=176952684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 176952685 . A . PASS END=176952692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 176952693 . G . PASS END=176952693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 176952694 . T . PASS END=176952695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 176952696 . C . PASS END=176952696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 176952697 . G . PASS END=176952701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 176952702 . G . PASS END=176952723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 176952724 . A . PASS END=176952724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 176952725 . A . PASS END=176952751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:12,0 chr2 176952752 . T . PASS END=176952759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 176952760 . T . PASS END=176952760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 176952761 . G . PASS END=176952761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 176952762 . C . PASS END=176952762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 176952763 . C . PASS END=176952770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 176952771 . G . PASS END=176952771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 176952772 . G . PASS END=176952776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 176952777 . C . PASS END=176952780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,438:0,42,255:14,0 chr2 176952781 . T . PASS END=176952789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 176952790 . G . PASS END=176952791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 176952792 . G A, 49.87 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=0.048;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:9,8,0:0.471,0.000:17:3,1,0:6,7,0:47:85,0,47,185,185,185:251,0,255:8,0:4.9874e+01,8.8013e-05,5.0000e+01,1.8464e+02,2.1941e+02,1.8765e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,5,6,2:6,3,3,5:176952792 chr2 176952793 . C . PASS END=176952797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 176952798 . G T, 49.87 PASS DP=15;MQ=250.00;MQRankSum=3.123;ReadPosRankSum=1.473;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:9,6,0:0.400,0.000:15:3,1,0:6,5,0:47:85,0,47,185,185,185:187,0,255:8,0:4.9874e+01,8.8013e-05,5.0000e+01,1.8464e+02,2.1941e+02,1.8765e+02:0.00,34.77,37.78,34.77,69.54,37.78:4,5,5,1:6,3,2,4:176952792 chr2 176952799 . G . PASS END=176952817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,599:0,45,255:17,0 chr2 176952818 . T . PASS END=176952818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 176952819 . G . PASS END=176952827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,651:0,41,255:19,0 chr2 176952828 . C . PASS END=176952828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176952829 . C . PASS END=176952838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 176952839 . A . PASS END=176952856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,592:0,40,255:19,0 chr2 176952857 . G . PASS END=176952863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr2 176952864 . A . PASS END=176952864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 176952865 . G . PASS END=176952868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 176952869 . G . PASS END=176952869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 176952870 . C . PASS END=176952873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 176952874 . G . PASS END=176952877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:22:0,50,767:0,50,255:18,0 chr2 176952878 . C . PASS END=176952888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,814:0,63,255:22,0 chr2 176952889 . C . PASS END=176952925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,746:0,66,255:26,0 chr2 176952926 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.295;ReadPosRankSum=3.523;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,14,0:0.538,0.000:26:4,8,0:8,6,0:48:85,0,50,493,429,922:255,0,255:12,0:5.0000e+01,6.7045e-05,5.2663e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,3,7,7:5,7,11,3 chr2 176952927 . A . PASS END=176952957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,925:0,64,255:26,0 chr2 176952958 . T . PASS END=176952961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 176952962 . T . PASS END=176952962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 176952963 . G . PASS END=176952963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 176952964 . C . PASS END=176953023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1150:0,89,255:33,0 chr2 176953024 . C . PASS END=176953032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1148:0,83,255:30,0 chr2 176953033 . T . PASS END=176953033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 176953034 . C . PASS END=176953048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr2 176953049 . T . PASS END=176953049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 176953050 . T . PASS END=176953050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 176953051 . T . PASS END=176953060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr2 176953061 . A T, 47.94 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=1.572;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,12,0:0.414,0.000:29:7,7,0:10,5,0:47:83,0,50,392,592,984:255,0,255:16,0:4.7943e+01,9.1378e-05,5.3000e+01,3.9238e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,11,6,6:12,5,7,5 chr2 176953062 . C . PASS END=176953093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 176953094 . G . PASS END=176953098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 176953099 . T . PASS END=176953149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,878:0,61,255:26,0 chr2 176953150 . C . PASS END=176953150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 176953151 . A . PASS END=176953178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 176953179 . A . PASS END=176953179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 176953180 . G . PASS END=176953203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:23,0 chr2 176953204 . A . PASS END=176953204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 176953205 . C . PASS END=176953205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 176953206 . A . PASS END=176953206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:20,0 chr2 176953207 . T . PASS END=176953220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,845:0,63,255:24,0 chr2 176953221 . T . PASS END=176953221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,821:0,56,255:22,0 chr2 176953222 . G . PASS END=176953239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 176953240 . G . PASS END=176953240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr2 176953241 . G . PASS END=176953243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 176953244 . C . PASS END=176953244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 176953245 . G . PASS END=176953263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,53,255:18,0 chr2 176953264 . T . PASS END=176953264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:39:26:0,39,585:0,78,255:13,0 chr2 176953265 . G . PASS END=176953274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:27:0,42,630:0,81,255:15,0 chr2 176953275 . C . PASS END=176953286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:33:26:0,33,495:0,71,255:12,0 chr2 176953287 . T TC, 50.00 PASS DP=27;MQ=249.64;MQRankSum=3.775;ReadPosRankSum=-0.370;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:11,16,0:0.593,0.000:27:4,9,0:7,7,0:46:80,0,46,180,180,180:255,0,255:11,15:5.0000e+01,1.0018e-04,4.8840e+01,1.8477e+02,2.1477e+02,1.8778e+02:0.00,30.00,33.01,34.77,64.77,37.78:5,6,4,12:6,5,7,9:176953287 chr2 176953288 . C . LowGQ END=176953288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:14,14:28:0:28:0,0,0:255,0,255:26,0 chr2 176953289 . C . PASS END=176953289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:24,1 chr2 176953290 . C . PASS END=176953290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 176953291 . C . PASS END=176953293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 176953294 . T . PASS END=176953294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,883:0,51,255:27,0 chr2 176953295 . T . PASS END=176953295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 176953296 . C . PASS END=176953296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 176953297 . G A, 50.00 PASS DP=29;MQ=249.66;MQRankSum=3.869;ReadPosRankSum=0.000;FractionInformativeReads=0.966;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:13,15,0:0.536,0.000:28:4,10,0:9,5,0:46:85,0,46,185,185,185:255,0,255:12,0:5.0000e+01,1.0018e-04,4.8840e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,7,5,10:7,6,6,9:176953287 chr2 176953298 . T . PASS END=176953299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 176953300 . C . PASS END=176953300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr2 176953301 . T . PASS END=176953301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176953302 . T . PASS END=176953302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,877:0,64,255:26,0 chr2 176953303 . G . PASS END=176953308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 176953309 . T . PASS END=176953309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 176953310 . T . PASS END=176953310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 176953311 . T . PASS END=176953311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 176953312 . C . PASS END=176953312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 176953313 . C . PASS END=176953333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:25:0,61,722:0,61,255:26,0 chr2 176953334 . T . PASS END=176953335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,774:0,53,255:21,0 chr2 176953336 . C . PASS END=176953337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 176953338 . G . PASS END=176953338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 176953339 . G . PASS END=176953339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 176953340 . T . PASS END=176953341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 176953342 . A . PASS END=176953342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:21,0 chr2 176953343 . G . PASS END=176953347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 176953348 . A . PASS END=176953348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,739:0,38,255:21,0 chr2 176953349 . T . PASS END=176953349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 176953350 . G . PASS END=176953359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 176953360 . C . PASS END=176953360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 176953361 . A . PASS END=176953364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 176953365 . A . PASS END=176953375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr2 176953376 . T . PASS END=176953376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 176953377 . C . PASS END=176953393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 176954345 . G . PASS END=176954382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:89:0,120,1800:0,244,255:40,0 chr2 176957619 . A . PASS END=176957628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr2 176957629 . C . PASS END=176957629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 176957630 . C . PASS END=176957637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 176957638 . G . PASS END=176957658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 176957659 . C . PASS END=176957671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 176957672 . C . PASS END=176957672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:7,0 chr2 176957673 . G . PASS END=176957675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 176957676 . G . PASS END=176957676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 176957677 . G . PASS END=176957677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 176957678 . T . LowGQ END=176957678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:7,0 chr2 176957679 . G . PASS END=176957680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 176957681 . C . PASS END=176957681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 176957682 . G . PASS END=176957682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 176957683 . C . PASS END=176957683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 176957684 . C . PASS END=176957686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 176957687 . G . PASS END=176957687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 176957688 . G . PASS END=176957688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 176957689 . C . PASS END=176957689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:6,0 chr2 176957690 . C . PASS END=176957690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 176957691 . T . PASS END=176957692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:5,0 chr2 176957693 . T . PASS END=176957695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr2 176957696 . C . PASS END=176957696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr2 176957697 . T . PASS END=176957697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr2 176957698 . C . PASS END=176957698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr2 176957699 . C . PASS END=176957699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:4,0 chr2 176957700 . T . LowGQ END=176957710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:0:5:0,0,133:0,0,140:4,0 chr2 176957711 . G . PASS END=176957724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,186:5,0 chr2 176957725 . C . PASS END=176957732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 176957733 . C . PASS END=176957733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 176957734 . A . PASS END=176957734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 176957735 . G . PASS END=176957741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 176957742 . G . PASS END=176957772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,255:9,0 chr2 176957773 . C . PASS END=176957784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:6:0,18,233:0,18,233:6,0 chr2 176957785 . G . PASS END=176957821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,210:6,0 chr2 176957822 . G A, 65.19 PASS DP=6;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,6,0:1.000,0.000:6:0,5,0:0,1,0:15:103,18,0,232,18,232:233,18,0:0,0:6.5192e+01,1.5192e+01,1.3348e-01,2.2947e+02,4.9962e+01,2.3247e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,1:0,0,4,2 chr2 176957823 . G . PASS END=176957828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,225:0,18,225:6,0 chr2 176957829 . G . PASS END=176957845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr2 176957846 . C . PASS END=176957851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 176957852 . G . PASS END=176957852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 176957853 . A . PASS END=176957859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 176957860 . A . PASS END=176957860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:15,0 chr2 176957861 . G . PASS END=176957862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 176957863 . G . PASS END=176957863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 176957864 . C . PASS END=176957869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 176957870 . C . PASS END=176957870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 176957871 . T . PASS END=176957871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:14,0 chr2 176957872 . C . PASS END=176957879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 176957880 . T . PASS END=176957880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 176957881 . C . PASS END=176957884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 176957885 . G . PASS END=176957885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 176957886 . T . PASS END=176957887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 176957888 . C . PASS END=176957889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 176957890 . C . PASS END=176957892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 176957893 . C . PASS END=176957893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 176957894 . T . PASS END=176957896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 176957897 . C . LowGQ END=176957897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,426:10,0,255:12,0 chr2 176957898 . G . PASS END=176957908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,598:0,45,255:16,0 chr2 176957909 . G . PASS END=176957909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 176957910 . C . PASS END=176957910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 176957911 . G . PASS END=176957911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,559:0,20,255:15,0 chr2 176957912 . C . PASS END=176957913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 176957914 . C . PASS END=176957914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 176957915 . G . PASS END=176957916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 176957917 . A . PASS END=176957919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 176957920 . C . PASS END=176957920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr2 176957921 . T . LowGQ END=176957921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,3:16:0:16:0,0,455:2,0,255:13,0 chr2 176957922 . C . PASS END=176957927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,531:0,48,255:16,0 chr2 176957928 . G . PASS END=176957928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 176957929 . C . PASS END=176957929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 176957930 . C . PASS END=176957931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 176957932 . A . PASS END=176957932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:17,0 chr2 176957933 . A . PASS END=176957933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:17,0 chr2 176957934 . G . PASS END=176957934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,584:0,40,255:18,0 chr2 176957935 . A . LowGQ END=176957935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,435:15,0,255:16,0 chr2 176957936 . G . PASS END=176957936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:18,0 chr2 176957937 . T . PASS END=176957937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:17,0 chr2 176957938 . G . PASS END=176957938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr2 176957939 . C . PASS END=176957944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,605:0,40,255:19,0 chr2 176957945 . A . PASS END=176957945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,629:0,26,255:16,0 chr2 176957946 . C . PASS END=176957948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:17,0 chr2 176957949 . A . PASS END=176957949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:13,0 chr2 176957950 . C . PASS END=176957953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:15,0 chr2 176957954 . T . PASS END=176957955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,543:0,34,255:14,0 chr2 176957956 . C . PASS END=176957956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 176957957 . A . PASS END=176957957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,474:0,18,255:13,0 chr2 176957958 . G . PASS END=176957960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 176957961 . G . PASS END=176957961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:14,0 chr2 176957962 . C . PASS END=176957964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 176957965 . C . PASS END=176957966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr2 176957967 . G . PASS END=176957967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:13,0 chr2 176957968 . C . PASS END=176957968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 176957969 . A . PASS END=176957969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:10,0 chr2 176957970 . G . PASS END=176957973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 176957974 . C . PASS END=176957977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 176957978 . G . PASS END=176957984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:21:13:0,21,315:0,25,255:10,0 chr2 176957985 . C . PASS END=176957991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 176957992 . T . PASS END=176957992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr2 176957993 . G . PASS END=176958010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 176958011 . C T, 50.00 PASS DP=13;MQ=240.13;MQRankSum=1.791;ReadPosRankSum=3.016;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,7,0:0.538,0.000:13:2,4,0:4,3,0:48:85,0,50,250,215,465:232,0,163:5,0:5.0000e+01,6.6010e-05,5.2832e+01,2.5030e+02,2.4930e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:1,5,4,3:3,3,5,2 chr2 176958012 . G . PASS END=176958022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 176958023 . C . PASS END=176958028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr2 176958029 . C . PASS END=176958030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 176958031 . G . PASS END=176958038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 176958039 . T . PASS END=176958039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr2 176958040 . C . PASS END=176958044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 176958045 . G . PASS END=176958045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 176958046 . G . PASS END=176958048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 176958049 . T . PASS END=176958049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 176958050 . G . PASS END=176958111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr2 176958112 . A . PASS END=176958115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 176958116 . G . PASS END=176958136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 176958137 . G . PASS END=176958148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 176958149 . C . PASS END=176958198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:18,0 chr2 176958199 . A . PASS END=176958199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:17,0 chr2 176958200 . G . PASS END=176958221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,635:0,40,255:19,0 chr2 176958222 . C . PASS END=176958224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 176958225 . G . PASS END=176958225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 176958226 . T . PASS END=176958227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176958228 . C . PASS END=176958247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,629:0,40,255:19,0 chr2 176958248 . G . PASS END=176958248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 176958249 . T . PASS END=176958255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 176958256 . T . PASS END=176958258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 176958259 . G . PASS END=176958267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 176958268 . A . PASS END=176958268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 176958269 . G . PASS END=176958288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:19,0 chr2 176958289 . T . PASS END=176958289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:17,0 chr2 176958290 . C . PASS END=176958291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 176958292 . C . PASS END=176958292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 176958293 . C . PASS END=176958293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr2 176958294 . A . PASS END=176958294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 176958295 . T . PASS END=176958295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 176958296 . G . PASS END=176958338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,848:0,63,255:24,0 chr2 176958339 . C . PASS END=176958343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 176958344 . G . PASS END=176958348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 176958349 . G . PASS END=176958389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,540:0,51,255:19,0 chr2 176958390 . T . PASS END=176958390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 176958391 . C . PASS END=176958391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 176958392 . C . PASS END=176958392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 176958393 . T . PASS END=176958399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 176958400 . G . PASS END=176958400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 176959205 . C . PASS END=176959205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 176959208 . G . PASS END=176959210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr2 176959211 . A . PASS END=176959211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 176959212 . T . PASS END=176959215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 176959216 . G . PASS END=176959253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1056:0,84,255:39,0 chr2 176959254 . G . PASS END=176959254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1282:0,62,255:36,0 chr2 176959255 . A . PASS END=176959322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,101,1411:0,101,255:40,0 chr2 176959323 . A . PASS END=176959323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1361:0,79,255:40,0 chr2 176959324 . T . PASS END=176959366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:43:0,108,1582:0,108,255:40,0 chr2 176959367 . A . PASS END=176959367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1454:0,79,255:35,0 chr2 176959368 . C . PASS END=176959406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:37:0,87,1305:0,95,255:38,0 chr2 176959407 . A . PASS END=176959420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:74:28:0,74,1078:0,74,255:26,0 chr2 176959421 . A . PASS END=176959429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176959430 . T . PASS END=176959430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,804:0,64,255:26,0 chr2 176959431 . C . PASS END=176959432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 176959433 . C . PASS END=176959433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 176959434 . C . PASS END=176959436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 176959437 . G . PASS END=176959453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr2 176959454 . C . PASS END=176959458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 176964530 . A . PASS END=176964530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 176964531 . T . PASS END=176964540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:12,0 chr2 176964541 . C . PASS END=176964541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 176964542 . A . PASS END=176964542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 176964543 . G . PASS END=176964556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,590:0,41,255:18,0 chr2 176964557 . G . PASS END=176964578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr2 176964579 . A . PASS END=176964579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 176964580 . T . PASS END=176964583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 176964584 . C . PASS END=176964585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 176964586 . G . PASS END=176964632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:24,0 chr2 176964633 . A . PASS END=176964644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 176964645 . T . PASS END=176964658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 176964659 . T . PASS END=176964659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 176964660 . A . PASS END=176964661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 176964662 . C . PASS END=176964663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:49:22:0,49,753:0,49,255:22,0 chr2 176964664 . G . PASS END=176964671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,809:0,69,255:23,0 chr2 176964672 . C . PASS END=176964677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:23:0,45,675:0,69,255:15,0 chr2 176964678 . C . PASS END=176964678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,745:0,35,255:14,0 chr2 176964679 . C . PASS END=176964682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:15,0 chr2 176964683 . G . PASS END=176964689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 176964690 . C . PASS END=176964690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 176964691 . G . PASS END=176964691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 176964692 . C . PASS END=176964692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 176964693 . C . PASS END=176964693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 176964694 . C . PASS END=176964700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr2 176964701 . T . PASS END=176964718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:12,0 chr2 176964719 . G . PASS END=176964722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 176964723 . G . PASS END=176964731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,380:0,33,255:11,0 chr2 176964732 . C . PASS END=176964732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,335:0,2,255:10,0 chr2 176964733 . C . PASS END=176964739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr2 176964740 . G . PASS END=176964740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 176964741 . G . PASS END=176964745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 176964746 . T . PASS END=176964746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 176964747 . C . PASS END=176964751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:12,0 chr2 176964752 . C . PASS END=176964752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 176964753 . C . PASS END=176964754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 176964755 . T . PASS END=176964755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 176964756 . A . PASS END=176964761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr2 176964762 . C . PASS END=176964762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 176964763 . T . PASS END=176964764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 176964765 . G . PASS END=176964765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 176964766 . C . PASS END=176964773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 176964774 . C . PASS END=176964774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 176964775 . T . PASS END=176964778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,419:0,39,255:13,0 chr2 176964779 . G . PASS END=176964780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 176964781 . C . PASS END=176964781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 176964782 . C . PASS END=176964783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 176964784 . G . PASS END=176964797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:15:0,32,540:0,32,255:13,0 chr2 176964798 . C . PASS END=176964823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,590:0,45,255:16,0 chr2 176964824 . A . PASS END=176964825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 176964826 . G . PASS END=176964829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 176964830 . T . PASS END=176964830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 176964831 . A . PASS END=176964831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr2 176964832 . T . PASS END=176964844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 176964845 . G . PASS END=176964849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 176964850 . T . PASS END=176964851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 176964852 . G . PASS END=176964863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,550:0,45,255:15,0 chr2 176964864 . G . PASS END=176964864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 176964865 . C . PASS END=176964872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 176964873 . C . PASS END=176964873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 176964874 . C . PASS END=176964898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 176964899 . A . PASS END=176964899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 176964900 . G . PASS END=176964947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 176964948 . C . PASS END=176964949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 176964950 . G . PASS END=176964982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:18,0 chr2 176964983 . C . PASS END=176964983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:16,0 chr2 176964984 . T . PASS END=176964997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,46,255:19,0 chr2 176964998 . C . PASS END=176965008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,809:0,69,255:23,0 chr2 176965009 . T . PASS END=176965009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 176965010 . G . PASS END=176965010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr2 176965011 . G . PASS END=176965011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr2 176965012 . C . PASS END=176965013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,789:0,72,255:24,0 chr2 176965014 . T . PASS END=176965014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 176965015 . C . PASS END=176965027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,884:0,72,255:24,0 chr2 176965028 . A . PASS END=176965028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 176965029 . A . PASS END=176965035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr2 176965036 . G . PASS END=176965037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 176965038 . T . PASS END=176965039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 176965040 . A . PASS END=176965040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 176965041 . A . PASS END=176965058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:23:0,61,817:0,61,255:27,0 chr2 176965059 . A . PASS END=176965059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176965060 . G . PASS END=176965062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 176965063 . G . PASS END=176965065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176965066 . G . PASS END=176965067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 176965068 . G . PASS END=176965069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 176965070 . G . PASS END=176965072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,994:0,70,255:26,0 chr2 176965073 . G . PASS END=176965073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:12:27:0,12,876:0,12,255:23,0 chr2 176965074 . C . PASS END=176965081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 176965082 . C . PASS END=176965082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr2 176965083 . T . PASS END=176965090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,939:0,64,255:26,0 chr2 176965091 . T . PASS END=176965091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,838:0,29,255:24,0 chr2 176965092 . C . PASS END=176965093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 176965094 . C . PASS END=176965094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,933:0,53,255:24,0 chr2 176965095 . T . PASS END=176965103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,878:0,61,255:25,0 chr2 176965104 . G . PASS END=176965104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:23,0 chr2 176965105 . T . PASS END=176965105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 176965106 . A . PASS END=176965106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,826:0,28,255:21,0 chr2 176965107 . A . PASS END=176965107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 176965108 . A . PASS END=176965108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,603:0,28,255:21,0 chr2 176965109 . C . PASS END=176965111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 176965112 . T . PASS END=176965112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 176965113 . G . PASS END=176965125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,848:0,72,255:24,0 chr2 176965126 . G . PASS END=176965126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 176965127 . G . PASS END=176965131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 176965250 . G . PASS END=176965266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr2 176965267 . G . PASS END=176965270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176965271 . C . PASS END=176965271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 176965272 . G . PASS END=176965273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176965274 . G . PASS END=176965274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,914:0,29,255:25,0 chr2 176965275 . G . PASS END=176965275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 176965276 . A . PASS END=176965286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 176965287 . G . PASS END=176965287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 176965288 . A . PASS END=176965291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 176965292 . G . PASS END=176965292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 176965293 . G . PASS END=176965294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176965295 . A . PASS END=176965295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 176965296 . A . PASS END=176965306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 176965307 . A . PASS END=176965307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,928:0,76,255:28,0 chr2 176965308 . G . PASS END=176965311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 176965312 . C . PASS END=176965313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr2 176965314 . G . PASS END=176965316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 176965317 . T . PASS END=176965317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 176965318 . G . PASS END=176965318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 176965319 . C . PASS END=176965319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 176965320 . G . PASS END=176965321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1050:0,90,255:30,0 chr2 176965322 . A . PASS END=176965322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 176965323 . G . PASS END=176965348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1119:0,82,255:33,0 chr2 176965349 . A . PASS END=176965349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1141:0,68,255:30,0 chr2 176965350 . A . PASS END=176965356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:31,0 chr2 176965357 . A . PASS END=176965357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 176965358 . A . PASS END=176965359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 176965360 . A . PASS END=176965370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr2 176965371 . C . PASS END=176965372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 176965373 . A . PASS END=176965393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,70,255:26,0 chr2 176965394 . A . PASS END=176965397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:27,0 chr2 176965398 . C . PASS END=176965398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 176965399 . A . PASS END=176965402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:28,0 chr2 176965403 . A . PASS END=176965403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 176965404 . C . PASS END=176965404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176965405 . C . PASS END=176965413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 176965414 . A . PASS END=176965414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:25,0 chr2 176965415 . A . PASS END=176965436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr2 176965437 . T . PASS END=176965438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 176965439 . T . PASS END=176965442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 176965443 . G . PASS END=176965443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:19,0 chr2 176965444 . A . PASS END=176965444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 176965445 . A . PASS END=176965446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 176965447 . A . PASS END=176965447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 176965448 . A . PASS END=176965478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,668:0,54,255:19,0 chr2 176965479 . G . PASS END=176965488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:13,0 chr2 176969859 . T . PASS END=176969860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 176969861 . A . PASS END=176969861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 176969862 . G . PASS END=176969864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:19,0 chr2 176969865 . G . PASS END=176969879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,739:0,63,255:26,0 chr2 176969880 . G . PASS END=176969892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 176969893 . C . PASS END=176969893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,929:0,65,255:26,0 chr2 176969894 . C . PASS END=176969941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,935:0,81,255:30,0 chr2 176969942 . T . PASS END=176970004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,845:0,61,255:26,0 chr2 176970005 . C . PASS END=176970008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 176970009 . G . PASS END=176970010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 176970011 . G . PASS END=176970027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:21:0,50,723:0,50,255:19,0 chr2 176970028 . G . PASS END=176970028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176970029 . C . PASS END=176970070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr2 176970071 . G . PASS END=176970073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 176970437 . C . PASS END=176970438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,227:0,24,227:8,0 chr2 176970439 . T . PASS END=176970446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 176970447 . C . PASS END=176970457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 176970458 . T . PASS END=176970474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 176970475 . G . PASS END=176970479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 176970480 . T . PASS END=176970493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,520:0,41,255:19,0 chr2 176970494 . G . PASS END=176970568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:23,0 chr2 176970569 . C . PASS END=176970622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,623:0,48,255:19,0 chr2 176970623 . G . PASS END=176970625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 176970626 . A . PASS END=176970626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,496:0,14,255:12,0 chr2 176970627 . G . PASS END=176970628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 176970629 . C . PASS END=176970629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 176970630 . C . PASS END=176970630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 176970631 . T . PASS END=176970631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr2 176970632 . T . PASS END=176970678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,443:0,33,255:13,0 chr2 176970679 . C . PASS END=176970685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 176970686 . G . PASS END=176970686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 176970687 . T . PASS END=176970693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 176970694 . A . PASS END=176970694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:15,0 chr2 176970695 . G . PASS END=176970703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,552:0,48,255:16,0 chr2 176970704 . G . PASS END=176970704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 176970705 . G . PASS END=176970724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 176970725 . A . PASS END=176970725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 176970726 . G . PASS END=176970740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:19,0 chr2 176970741 . C . PASS END=176970755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:26,0 chr2 176970756 . G . PASS END=176970789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1119:0,80,255:32,0 chr2 176970790 . G . PASS END=176970791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr2 176970792 . A . PASS END=176970792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 176970793 . A . PASS END=176970793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:32,0 chr2 176970794 . G . PASS END=176970794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:32,0 chr2 176970795 . C . PASS END=176970796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1103:0,60,255:32,0 chr2 176970797 . G . PASS END=176970797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 176970798 . A . PASS END=176970799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:28,0 chr2 176970800 . G . PASS END=176970801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:30,0 chr2 176970802 . G . PASS END=176970802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:29,0 chr2 176970803 . T . PASS END=176970816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 176970817 . G . PASS END=176970817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 176970818 . T . PASS END=176970821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 176970822 . A . PASS END=176970844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:24,0 chr2 176970845 . G . PASS END=176970870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr2 176971665 . T . PASS END=176971688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,305:0,30,255:12,0 chr2 176971689 . G . PASS END=176971689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 176971690 . C . PASS END=176971704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,480:0,39,255:13,0 chr2 176971705 . T . PASS END=176971706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:13,0 chr2 176971707 . C . PASS END=176971708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 176971709 . G . PASS END=176971713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 176971714 . T . PASS END=176971716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 176971717 . C . PASS END=176971722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 176971723 . C . PASS END=176971723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr2 176971724 . G . PASS END=176971746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr2 176971747 . G . PASS END=176971761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,482:0,39,255:13,0 chr2 176971762 . G . PASS END=176971767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr2 176971768 . A . PASS END=176971768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 176971769 . G . PASS END=176971776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr2 176971851 . C . PASS END=176971868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr2 176971869 . G . PASS END=176971881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1019:0,84,255:28,0 chr2 176971882 . T . PASS END=176971882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 176971883 . T . PASS END=176971912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:28:0,83,1047:0,83,255:34,0 chr2 176971921 . G . PASS END=176971927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:33,0 chr2 176972084 . A . PASS END=176972114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,637:0,51,255:19,0 chr2 176972115 . C . PASS END=176972115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176972116 . A . PASS END=176972117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr2 176972118 . C . PASS END=176972118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr2 176972119 . C . PASS END=176972120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,767:0,50,255:19,0 chr2 176972121 . G . PASS END=176972144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,922:0,62,255:24,0 chr2 176972145 . A . PASS END=176972145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 176972146 . C . PASS END=176972165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,839:0,69,255:23,0 chr2 176972166 . T . PASS END=176972166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 176972167 . C . PASS END=176972172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,861:0,69,255:23,0 chr2 176972173 . C . PASS END=176972173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 176972174 . A . PASS END=176972222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,879:0,66,255:26,0 chr2 176972223 . A . PASS END=176972231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 176972232 . A . PASS END=176972241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 176972242 . G . PASS END=176972259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,44,255:17,0 chr2 176972260 . C . PASS END=176972271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:12,0 chr2 176972272 . C . PASS END=176972275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 176972276 . G . PASS END=176972279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 176972280 . A . PASS END=176972297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:6:0,15,225:0,18,225:6,0 chr2 176972298 . A . PASS END=176972298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:6:0,9,135:0,18,202:3,0 chr2 176972299 . G . PASS END=176972302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:4,0 chr2 176972303 . C . LowGQ END=176972372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr2 176972373 . G . LowGQ END=176972571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:0:0,0,0:0,0,0:3,0 chr2 176972572 . C . PASS END=176972576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 176972577 . A . PASS END=176972577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 176972578 . C . PASS END=176972698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 176972699 . G . PASS END=176972699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 176972700 . G . PASS END=176972706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,233:6,0 chr2 176972707 . C . PASS END=176972710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 176972711 . A . PASS END=176972712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,219:0,10,219:6,0 chr2 176972713 . G . PASS END=176972731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,304:0,24,255:9,0 chr2 176972732 . G . PASS END=176972743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 176972744 . G . PASS END=176972750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 176972751 . G . PASS END=176972761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 176972762 . A . PASS END=176972763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 176972764 . G . PASS END=176972781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:12,0 chr2 176972782 . G . PASS END=176972785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 176972786 . A . PASS END=176972786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,368:0,3,255:12,0 chr2 176972787 . A . PASS END=176972787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:12,0 chr2 176972788 . G . PASS END=176972796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 176972797 . A . PASS END=176972797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr2 176972798 . G . PASS END=176972809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,451:0,39,255:13,0 chr2 176972810 . G . PASS END=176972810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 176972811 . G . PASS END=176972819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 176972820 . A . PASS END=176972820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 176972821 . G . PASS END=176972821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,412:0,8,255:11,0 chr2 176972822 . G . PASS END=176972828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 176972829 . C . PASS END=176972829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr2 176972830 . G . PASS END=176972836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 176972837 . G . PASS END=176972837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:9,0 chr2 176972838 . C . PASS END=176972856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:11,0 chr2 176972857 . C . PASS END=176972863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:9,0 chr2 176972864 . G . PASS END=176972864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:11:0,18,270:0,33,255:6,0 chr2 176973635 . T . PASS END=176973635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 176973636 . T . PASS END=176973636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 176973637 . G . PASS END=176973665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:26,0 chr2 176973666 . T . PASS END=176973669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1033:0,84,255:33,0 chr2 176973670 . T . PASS END=176973670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:32,0 chr2 176973671 . A . PASS END=176973692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:34:0,95,1213:0,95,255:37,0 chr2 176973693 . A . PASS END=176973693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1017:0,77,255:34,0 chr2 176973694 . C . PASS END=176973743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:36:0,82,1296:0,82,255:40,0 chr2 176973744 . T . PASS END=176973744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1424:0,54,255:38,0 chr2 176973745 . C . PASS END=176973811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:40:0,85,1388:0,85,255:40,0 chr2 176973812 . A . PASS END=176973812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1454:0,79,255:35,0 chr2 176973813 . A . PASS END=176973848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1217:0,86,255:39,0 chr2 176973849 . C . PASS END=176973849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:31,0 chr2 176973850 . A . PASS END=176973870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:32:0,84,1135:0,85,255:34,0 chr2 176981552 . C . PASS END=176981552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 176981556 . C . PASS END=176981556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 176981562 . A . PASS END=176981564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr2 176981565 . T . PASS END=176981565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 176981566 . C . PASS END=176981570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,615:0,51,255:19,0 chr2 176981571 . C . PASS END=176981571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr2 176981572 . C . PASS END=176981572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 176981573 . C . PASS END=176981577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:22,0 chr2 176981578 . G . PASS END=176981579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 176981580 . T . PASS END=176981580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr2 176981581 . C . PASS END=176981587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 176981588 . T . PASS END=176981588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr2 176981589 . G . PASS END=176981590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 176981591 . T . PASS END=176981591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,768:0,30,255:21,0 chr2 176981592 . A . PASS END=176981592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 176981593 . A . PASS END=176981595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 176981596 . C . PASS END=176981596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,2 chr2 176981597 . T . LowGQ END=176981597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,651:31,0,255:20,2 chr2 176981598 . T . PASS END=176981598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:13:23:0,13,615:0,13,255:22,0 chr2 176981599 . T . PASS END=176981599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 176981600 . T . PASS END=176981600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 176981601 . T . PASS END=176981602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 176981603 . A . PASS END=176981604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,839:0,69,255:23,0 chr2 176981605 . T . PASS END=176981605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr2 176981606 . A . PASS END=176981610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr2 176981611 . C . PASS END=176981611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr2 176981612 . C . PASS END=176981614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 176981615 . G . PASS END=176981615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 176981616 . A . PASS END=176981623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,947:0,67,255:26,0 chr2 176981624 . C . PASS END=176981628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 176981629 . G . PASS END=176981629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:25,0 chr2 176981630 . G . PASS END=176981631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 176981632 . G . PASS END=176981635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 176981636 . C . PASS END=176981636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 176981637 . A . PASS END=176981638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:24,0 chr2 176981639 . T . PASS END=176981827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:80:31:0,80,1169:0,80,255:40,0 chr2 176981828 . A . PASS END=176981828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:73:53:0,73,1661:0,73,255:40,0 chr2 176981829 . A . PASS END=176981877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:38:0,84,1347:0,84,255:40,0 chr2 176981878 . A . PASS END=176981878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:34,0 chr2 176981879 . C . PASS END=176981883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1338:0,101,255:38,0 chr2 176981884 . A . PASS END=176981884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:35,0 chr2 176981885 . G . PASS END=176981899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:35:0,98,1258:0,98,255:35,0 chr2 176981900 . C . PASS END=176981900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr2 176981901 . T . PASS END=176981969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1181:0,86,255:37,0 chr2 176981970 . G . PASS END=176981985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 176981986 . A . PASS END=176981988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 176981989 . A . PASS END=176981992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:20,0 chr2 176981993 . T . PASS END=176982016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,601:0,54,255:19,0 chr2 176982017 . T . PASS END=176982017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 176982018 . A . PASS END=176982076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 176982077 . C . PASS END=176982077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 176982078 . A . PASS END=176982092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 176982093 . C . PASS END=176982093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176982094 . T . PASS END=176982097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 176982098 . G . PASS END=176982100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176982101 . C . PASS END=176982237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,609:0,40,255:19,0 chr2 176982238 . C . PASS END=176982242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 176982243 . G . PASS END=176982243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 176982244 . A . PASS END=176982267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 176982268 . C . PASS END=176982272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 176982273 . T . PASS END=176982273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:18,0 chr2 176982274 . C . PASS END=176982292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr2 176982293 . G . PASS END=176982293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 176982294 . A . PASS END=176982306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,653:0,51,255:18,0 chr2 176983682 . A . PASS END=176983682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 176983683 . G . PASS END=176983687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 176983688 . T . PASS END=176983688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 176983689 . C G, 50.00 PASS DP=29;MQ=247.87;MQRankSum=3.950;ReadPosRankSum=-0.589;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,15,0:0.517,0.000:29:8,8,0:6,7,0:48:85,0,50,528,472,1000:255,0,255:13,0:5.0000e+01,6.5751e-05,5.2897e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,11,4:7,7,8,7:176983679 chr2 176983690 . A . PASS END=176983691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 176983692 . G . PASS END=176983692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr2 176983693 . T . PASS END=176983698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1209:0,86,255:31,0 chr2 176983699 . A . PASS END=176983699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1150:0,74,255:31,0 chr2 176983700 . C . PASS END=176983728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:34:0,88,1136:0,88,255:40,0 chr2 176983729 . A . PASS END=176983959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:96:38:0,96,1440:0,104,255:40,0 chr2 176983980 . C . PASS END=176983980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 176983993 . G . PASS END=176983993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,87,255:22,0 chr2 176984035 . G . PASS END=176984035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 176984042 . G . PASS END=176984042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 176984163 . G GTA,GTATATATATATATATA,GTATATATA,GTATATA,GTATATATATA, 50.16 PASS DP=21;MQ=235.76;FractionInformativeReads=0.714 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/3:7,1,0,3,2,2,0:0.067,0.000,0.200,0.133,0.133,0.000:15:3,1,0,0,1,1,0:4,0,0,3,1,1,0:15:54,109,156,137,475,184,0,469,395,47,26,524,418,455,73,15,456,410,427,436,62,624,624,624,624,624,624,624:255,0,225:0,4:5.0156e+01,1.0917e+02,1.5917e+02,1.3669e+02,4.5000e+02,1.8669e+02,1.5629e-01,4.5000e+02,3.9911e+02,5.0156e+01,2.5893e+01,4.5000e+02,4.2236e+02,4.5000e+02,7.5893e+01,1.4848e+01,4.5000e+02,4.1407e+02,4.3129e+02,4.3950e+02,6.4848e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,4.00,7.01,4.00,8.00,7.01,4.00,8.00,8.00,7.01,4.00,8.00,8.00,8.00,7.01,4.00,8.00,8.00,8.00,8.00,7.01,34.77,38.77,38.77,38.77,38.77,38.77,37.78:3,4,4,4:3,4,3,5 chr2 176984167 . A . PASS END=176984167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,1 chr2 176984192 . T . PASS END=176984192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 176984194 . A ATATATATATATAT,ATATAT,ATAT,ATATATAT, 50.00 PASS DP=37;MQ=242.02;FractionInformativeReads=0.622 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,5,0,0,0,0:0.217,0.000,0.000,0.000,0.000:23:11,2,0,0,0,0:7,3,0,0,0,0:47:80,0,47,114,676,161,150,692,781,198,86,679,742,753,134,881,881,881,881,881,881:255,0,255:18,0:5.0000e+01,8.5425e-05,5.0156e+01,1.1381e+02,4.5000e+02,1.6410e+02,1.5032e+02,4.5000e+02,4.5000e+02,2.0081e+02,8.6340e+01,4.5000e+02,4.5000e+02,4.5000e+02,1.3654e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,30.00,33.01,30.00,60.00,33.01,30.00,60.00,60.00,33.01,30.00,60.00,60.00,60.00,33.01,34.77,64.77,64.77,64.77,64.77,37.78:11,7,2,3:8,10,1,4 chr2 176984229 . G . PASS END=176984229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 176984237 . G . PASS END=176984237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 176984427 . A . PASS END=176984427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,6:82:38:82:0,38,2641:0,38,255:40,4 chr2 176987497 . A . PASS END=176987509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 176987510 . G . PASS END=176987529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:16,0 chr2 176987530 . T . PASS END=176987530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 176987531 . C . PASS END=176987574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,576:0,48,255:19,0 chr2 176987575 . G . PASS END=176987583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:21,0 chr2 176987584 . G . PASS END=176987584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 176987585 . G . PASS END=176987589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 176987590 . G . PASS END=176987590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 176987591 . A . PASS END=176987594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 176987595 . G . PASS END=176987595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr2 176987596 . T . PASS END=176987596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 176987597 . T . PASS END=176987604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 176987605 . C . PASS END=176987605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 176987606 . G . PASS END=176987606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 176987607 . C . PASS END=176987607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 176987608 . T . PASS END=176987610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 176987611 . G . PASS END=176987611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 176987612 . G . PASS END=176987619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 176987620 . G . PASS END=176987620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 176987621 . G . PASS END=176987624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 176987625 . A . PASS END=176987625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 176987626 . G . PASS END=176987626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 176987627 . G . PASS END=176987627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr2 176987628 . C . LowGQ END=176987629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:21:0,0,645:6,0,255:20,0 chr2 176987630 . C . PASS END=176987630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,704:0,11,255:20,0 chr2 176987631 . G . PASS END=176987631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 176987632 . C . LowGQ END=176987632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,668:3,0,255:18,0 chr2 176987633 . A . PASS END=176987634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:11:22:0,11,668:0,11,255:20,0 chr2 176987635 . G . PASS END=176987637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:21,0 chr2 176987638 . C . PASS END=176987638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 176987639 . G . PASS END=176987642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 176987643 . T . PASS END=176987643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,698:0,11,255:19,0 chr2 176987644 . G . PASS END=176987644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 176987645 . C . PASS END=176987645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr2 176987646 . A . PASS END=176987646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 176987647 . G . PASS END=176987648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:36:25:0,36,825:0,36,255:24,0 chr2 176987649 . T . PASS END=176987649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,815:0,23,255:22,0 chr2 176987650 . G . PASS END=176987650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:22,0 chr2 176987651 . T . PASS END=176987654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 176987655 . T . PASS END=176987656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 176987657 . A . PASS END=176987675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 176987676 . C . PASS END=176987678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:22,0 chr2 176987679 . C . PASS END=176987683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 176987684 . T . PASS END=176987684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr2 176987685 . C . PASS END=176987719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:25:0,71,947:0,71,255:26,0 chr2 176987720 . T . PASS END=176987720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,903:0,56,255:23,0 chr2 176987721 . C . PASS END=176987728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 176987729 . C . PASS END=176987729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr2 176987730 . G . PASS END=176987749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:24,0 chr2 176987750 . A . PASS END=176987750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:22,0 chr2 176987751 . G . PASS END=176987784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,800:0,66,255:23,0 chr2 176987785 . C . PASS END=176987828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,592:0,51,255:18,0 chr2 176987829 . G . PASS END=176987829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 176987830 . C . PASS END=176987844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 176987845 . C . PASS END=176987874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 176987875 . C . PASS END=176987888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 176987889 . C . PASS END=176987906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr2 176987907 . A . PASS END=176987907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 176987908 . G . PASS END=176987909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 176987910 . C . PASS END=176987910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 176987911 . G . PASS END=176987918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:12,0 chr2 176987919 . G . PASS END=176987919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr2 176987920 . G . PASS END=176987923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 176987924 . G . PASS END=176987929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:12:0,21,315:0,36,255:9,0 chr2 176987930 . C . PASS END=176987935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 176987936 . C . PASS END=176987936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 176987937 . T . PASS END=176987937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 176987938 . G . PASS END=176987943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 176987944 . A . LowGQ END=176987944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr2 176987945 . G . PASS END=176987973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,243:9,0 chr2 176987974 . A . PASS END=176987974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr2 176987975 . T . PASS END=176987976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 176987977 . A . PASS END=176987978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,280:0,24,255:8,0 chr2 176987979 . G . PASS END=176987979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 176987980 . C . PASS END=176987985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 176987986 . A . PASS END=176987986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 176987987 . C . PASS END=176987987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 176987988 . C . PASS END=176987994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 176987995 . G . PASS END=176988007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr2 176988008 . C . LowGQ END=176988009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,217:15,0,231:7,0 chr2 176988010 . A . PASS END=176988011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 176988012 . G . LowGQ END=176988012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr2 176988013 . G . PASS END=176988017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 176988018 . C . PASS END=176988023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 176988024 . C . PASS END=176988024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 176988025 . A . PASS END=176988037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr2 176988038 . C . PASS END=176988038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 176988039 . C . PASS END=176988039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 176988040 . A . PASS END=176988042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 176988043 . T . PASS END=176988049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 176988050 . C . PASS END=176988090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,329:0,33,255:11,0 chr2 176988091 . T . PASS END=176988093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 176988094 . C . PASS END=176988094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 176988095 . A . PASS END=176988100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 176988101 . G . PASS END=176988101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 176988102 . C . PASS END=176988104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 176988105 . C . PASS END=176988126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr2 176988127 . T . PASS END=176988127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 176988128 . C . PASS END=176988136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,441:0,36,255:13,0 chr2 176988137 . A . PASS END=176988137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 176988138 . G . PASS END=176988181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,464:0,39,255:13,0 chr2 176988182 . G . PASS END=176988182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 176988183 . G . PASS END=176988220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,482:0,36,255:13,0 chr2 176988221 . C . PASS END=176988235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr2 176988236 . A . PASS END=176988243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 176988244 . A . PASS END=176988245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 176988246 . C . PASS END=176988256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 176988257 . C . PASS END=176988264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 176988265 . G . PASS END=176988276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 176988277 . C . PASS END=176988279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 176988280 . C . PASS END=176988280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 176988281 . A . PASS END=176988289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 176988290 . C . PASS END=176988313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 176988662 . A . PASS END=176988663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 176988664 . A . PASS END=176988686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,521:0,45,255:18,0 chr2 176988687 . C . PASS END=176988691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr2 176988692 . G . PASS END=176988692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 176988693 . C . PASS END=176988707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,917:0,62,255:25,0 chr2 176988708 . G . PASS END=176988708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 176988709 . C . PASS END=176988711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 176988712 . T . PASS END=176988712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 176988713 . G . PASS END=176988755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:31:0,87,1065:0,91,255:39,0 chr2 176988756 . C . PASS END=176988756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:37,0 chr2 176988757 . C . PASS END=176988903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,99,1436:0,99,255:40,0 chr2 176995095 . A . LowGQ END=176995163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:3,0:3:0:1:0,0,0:0,0,0:3,1 chr2 176995164 . G . PASS END=176995167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 176995168 . A . LowGQ END=176995178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,63:0,0,82:3,0 chr2 176995179 . C . PASS END=176995182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 176995183 . C . LowGQ END=176995183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 176995184 . T . PASS END=176995184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 176995185 . T . LowGQ END=176995185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,100:5,0,104:3,0 chr2 176995186 . A . PASS END=176995186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 176995187 . C . LowGQ END=176995232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,1:3:0:3:0,0,39:0,0,69:3,0 chr2 176995233 . G . PASS END=176995264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 176995265 . C . PASS END=176995301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 176995302 . G . PASS END=176995304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 176995305 . C . PASS END=176995309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 176995310 . G . PASS END=176995345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:10:6:0,10,194:0,10,194:6,0 chr2 176995346 . C . PASS END=176995364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:9,0 chr2 176995365 . C . PASS END=176995365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 176995366 . A . PASS END=176995367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 176995368 . G . PASS END=176995397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 176995398 . G . PASS END=176995399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 176995400 . C . PASS END=176995432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,398:0,33,255:12,0 chr2 176995433 . G . PASS END=176995433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr2 176995434 . C . PASS END=176995463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,419:0,36,255:13,0 chr2 176995464 . T . PASS END=176995464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:12,0 chr2 176995465 . G . PASS END=176995465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 176995466 . C . PASS END=176995472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 176995473 . A . PASS END=176995473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,388:0,12,255:13,0 chr2 176995474 . T . PASS END=176995478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 176995479 . T . PASS END=176995479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 176995480 . G . PASS END=176995484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 176995485 . G . PASS END=176995496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,565:0,32,255:13,0 chr2 176995497 . A . PASS END=176995497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 176995498 . A . PASS END=176995498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 176995499 . G . PASS END=176995504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr2 176995505 . C . PASS END=176995505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr2 176995506 . G . PASS END=176995518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:18,0 chr2 176995519 . T . PASS END=176995525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,808:0,63,255:22,0 chr2 176995526 . A . PASS END=176995527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 176995528 . A . PASS END=176995543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,754:0,66,255:22,0 chr2 176995544 . C . PASS END=176995544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr2 176995545 . C . PASS END=176995570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:26,0 chr2 176995571 . T . PASS END=176995572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176995573 . C . PASS END=176995573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 176995574 . T . PASS END=176995574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 176995575 . G . PASS END=176995575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 176995576 . A . PASS END=176995577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176995578 . T . PASS END=176995579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:26,0 chr2 176995580 . T . PASS END=176995580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 176995581 . A . PASS END=176995581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176995582 . A . PASS END=176995582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 176995583 . A . PASS END=176995583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176995584 . T . PASS END=176995585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 176995586 . G . PASS END=176995586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 176995587 . T . PASS END=176995588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,969:0,65,255:26,0 chr2 176995589 . C . PASS END=176995596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr2 176995597 . A . PASS END=176995597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:26,0 chr2 176995598 . T . PASS END=176995598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr2 176995599 . A . PASS END=176995605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 176995606 . A . PASS END=176995631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 176995632 . T . PASS END=176995633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,814:0,53,255:20,0 chr2 176995634 . G . PASS END=176995634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 176995635 . T . PASS END=176995636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,671:0,52,255:20,0 chr2 176995637 . T . PASS END=176995638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 176995639 . C . PASS END=176995656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,617:0,41,255:19,0 chr2 176995657 . G . PASS END=176995661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr2 176995662 . A . PASS END=176995662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,643:0,26,255:12,0 chr2 176995663 . G . PASS END=176995671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:34:16:0,34,540:0,34,255:13,0 chr2 176996045 . C . PASS END=176996045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr2 176996046 . A . PASS END=176996046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:20,0 chr2 176996047 . G . PASS END=176996048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:45:26:0,45,851:0,45,255:23,0 chr2 176996049 . T . PASS END=176996049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,790:0,28,255:21,0 chr2 176996050 . C . PASS END=176996050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,815:0,48,255:24,0 chr2 176996051 . C . PASS END=176996051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:25,0 chr2 176996052 . T . PASS END=176996052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,729:0,15,255:22,0 chr2 176996053 . G . PASS END=176996053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,787:0,25,255:24,0 chr2 176996054 . G . PASS END=176996055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:64:27:0,64,923:0,64,255:26,0 chr2 176996056 . A . PASS END=176996056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,787:0,25,255:25,0 chr2 176996057 . G . PASS END=176996058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:29:0,43,923:0,43,255:28,0 chr2 176996059 . C . PASS END=176996059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 176996060 . G . PASS END=176996060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr2 176996061 . A . PASS END=176996062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 176996063 . G . PASS END=176996065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1076:0,63,255:31,0 chr2 176996066 . G . PASS END=176996066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 176996067 . A . PASS END=176996070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:32:0,63,1003:0,63,255:33,0 chr2 176996071 . C . PASS END=176996071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1164:0,58,255:33,0 chr2 176996072 . A . PASS END=176996074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:89:35:0,89,1217:0,89,255:36,0 chr2 176996075 . C . PASS END=176996075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:38,0 chr2 176996076 . C . PASS END=176996083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1380:0,84,255:40,0 chr2 176996084 . G . PASS END=176996087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:41:0,90,1441:0,90,255:40,0 chr2 176996088 . C . PASS END=176996088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:78:43:0,78,1119:0,78,255:39,0 chr2 176996089 . C . PASS END=176996093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:43:0,90,1513:0,90,255:40,0 chr2 176996094 . T . LowGQ END=176996094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,7:52:0:52:0,0,1225:19,0,255:40,0 chr2 176996095 . C . PASS END=176996095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,139,255:40,0 chr2 176996096 . T . PASS END=176996096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:67:52:0,67,1464:0,67,255:40,0 chr2 176996097 . A . PASS END=176996115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:81:51:0,81,1547:0,81,255:40,0 chr2 176996116 . C . LowGQ END=176996116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,8:54:0:54:0,0,1303:22,0,255:40,0 chr2 176996117 . T . PASS END=176996123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:54:0,90,1716:0,90,255:40,0 chr2 176996124 . C . PASS END=176996124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:52:60:0,52,1839:0,52,255:40,0 chr2 176996125 . C . PASS END=176996322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:84:35:0,84,1260:0,101,255:40,0 chr2 176996323 . G . PASS END=176996340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,66,255:25,0 chr2 177016362 . A . PASS END=177016362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr2 177016363 . T . PASS END=177016372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,294:0,24,255:9,0 chr2 177016373 . T . PASS END=177016373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,205:0,10,205:8,0 chr2 177016374 . T . PASS END=177016376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 177016377 . T . PASS END=177016455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr2 177016456 . A . PASS END=177016456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 177016457 . G . PASS END=177016458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 177016459 . G . PASS END=177016460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 177016461 . G . PASS END=177016465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 177016466 . C . PASS END=177016466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr2 177016467 . T . PASS END=177016470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 177016471 . A . PASS END=177016471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr2 177016472 . C . PASS END=177016480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:11,0 chr2 177016481 . C . PASS END=177016481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 177016482 . G . PASS END=177016486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr2 177016487 . G . PASS END=177016491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 177016492 . C . PASS END=177016493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 177016494 . G . PASS END=177016494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 177016495 . A . PASS END=177016495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:8,0 chr2 177016496 . C . PASS END=177016496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 177016497 . T . PASS END=177016497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 177016498 . T . LowGQ END=177016498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr2 177016499 . C . PASS END=177016509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 177016510 . G . PASS END=177016510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr2 177016511 . G . PASS END=177016512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 177016513 . T . PASS END=177016513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:13,0 chr2 177016514 . C . PASS END=177016520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr2 177016521 . C . PASS END=177016527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 177016528 . A . PASS END=177016531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177016532 . C . PASS END=177016532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 177016533 . G . PASS END=177016534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177016535 . T . PASS END=177016535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr2 177016536 . G . PASS END=177016557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr2 177016558 . G . PASS END=177016558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 177016559 . C . PASS END=177016576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:16,0 chr2 177016577 . G . PASS END=177016577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 177016578 . C . PASS END=177016599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,537:0,48,255:17,0 chr2 177016600 . A . PASS END=177016600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 177016601 . A . PASS END=177016633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:18,0 chr2 177016634 . T . PASS END=177016656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 177016657 . C . PASS END=177016666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 177016667 . T . PASS END=177016668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:14,0 chr2 177016669 . C . PASS END=177016669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 177016670 . G . PASS END=177016670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr2 177016671 . C . PASS END=177016671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 177016672 . C . PASS END=177016672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:15,0 chr2 177016673 . G . PASS END=177016682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr2 177016683 . C . PASS END=177016683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:14,0 chr2 177016684 . C . PASS END=177016690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177016691 . C . PASS END=177016691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177016692 . C . PASS END=177016693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 177016694 . G . PASS END=177016716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,515:0,45,255:16,0 chr2 177016717 . A . PASS END=177016717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 177016718 . G . PASS END=177016721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:17,0 chr2 177016722 . C . PASS END=177016722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 177016723 . C . PASS END=177016727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 177016728 . T C, 47.15 PASS DP=17;MQ=249.54;MQRankSum=3.266;ReadPosRankSum=3.266;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,6,0:0.353,0.000:17:3,3,0:8,3,0:45:82,0,47,182,182,182:181,0,255:11,0:4.7155e+01,1.2710e-04,5.0000e+01,1.8192e+02,2.1669e+02,1.8494e+02:0.00,34.77,37.78,34.77,69.54,37.78:6,5,3,3:6,5,2,4 chr2 177016729 . C . PASS END=177016765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr2 177016766 . C . PASS END=177016766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 177016767 . T . PASS END=177016794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,437:0,39,255:13,0 chr2 177017336 . T . PASS END=177017336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 177017337 . G . PASS END=177017342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 177017343 . C . PASS END=177017371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,658:0,60,255:26,0 chr2 177017372 . C . PASS END=177017373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 177017374 . C . PASS END=177017374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 177017375 . G . PASS END=177017376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 177017377 . A . PASS END=177017378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 177017379 . G . PASS END=177017670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1175:0,86,255:40,0 chr2 177033843 . A . PASS END=177033843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr2 177033844 . T . PASS END=177033857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,742:0,63,255:26,0 chr2 177033858 . G . PASS END=177033990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1194:0,84,255:40,0 chr2 177033991 . A . PASS END=177033991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1288:0,73,255:30,0 chr2 177033992 . C . PASS END=177034013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1102:0,81,255:35,0 chr2 177034014 . T . PASS END=177034014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr2 177034015 . C . PASS END=177034017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:34,0 chr2 177034018 . T . PASS END=177034018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1091:0,74,255:32,0 chr2 177034019 . G . PASS END=177034046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1288:0,81,255:35,0 chr2 177034047 . T . PASS END=177034048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,94,255:26,0 chr2 177034049 . C . PASS END=177034054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1260:0,108,255:29,0 chr2 177034055 . G . PASS END=177034055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:29,0 chr2 177034056 . A . PASS END=177034058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:30,0 chr2 177034059 . T . PASS END=177034059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:25:34:0,25,1094:0,25,255:30,0 chr2 177034060 . C . PASS END=177034061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 177034062 . G . PASS END=177034062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 177034063 . C . PASS END=177034068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 177034069 . T . PASS END=177034081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,77,255:26,0 chr2 177034082 . C . PASS END=177034104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 177034105 . G . PASS END=177034105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 177034106 . C . PASS END=177034118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1070:0,74,255:27,0 chr2 177034119 . C . PASS END=177034120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 177034121 . G T, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.561;ReadPosRankSum=0.807;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:14,15,0:0.517,0.000:29:9,6,0:5,9,0:48:85,0,50,508,493,1001:255,0,255:13,0:5.0000e+01,6.5492e-05,5.2956e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,7,8:7,7,8,7:177034121 chr2 177034122 . G . PASS END=177034129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 177034130 . G A, 49.33 PASS DP=29;MQ=250.00;MQRankSum=4.539;ReadPosRankSum=2.215;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|0:16,13,0:0.448,0.000:29:7,8,0:9,5,0:48:84,0,50,457,571,1028:255,0,255:14,0:4.9326e+01,7.2481e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,3,10:10,6,4,9:177034121 chr2 177034131 . A . PASS END=177034136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 177034137 . C . PASS END=177034137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 177034138 . A . PASS END=177034138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,876:0,29,255:24,0 chr2 177034139 . G . PASS END=177034169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,870:0,61,255:25,0 chr2 177034170 . C . PASS END=177034195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:25,0 chr2 177034196 . A . PASS END=177034196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:22,0 chr2 177034197 . C . PASS END=177034236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr2 177034237 . C . PASS END=177034237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 177034238 . C . PASS END=177034239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:25,0 chr2 177034240 . A . PASS END=177034243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1139:0,80,255:29,0 chr2 177034244 . T . PASS END=177034244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr2 177034245 . G . PASS END=177034258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 177034259 . T . PASS END=177034259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:27,0 chr2 177034260 . G . PASS END=177034264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 177034265 . G . PASS END=177034265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:27,0 chr2 177034266 . A . PASS END=177034323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1211:0,88,255:40,0 chr2 177034324 . T . PASS END=177034324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1341:0,51,255:35,0 chr2 177034325 . C . PASS END=177034334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:36,0 chr2 177034335 . A . PASS END=177034335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1215:0,75,255:34,0 chr2 177034336 . A . PASS END=177034354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1294:0,92,255:36,0 chr2 177034355 . C . PASS END=177034355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:33,0 chr2 177034356 . A . PASS END=177034362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1201:0,89,255:33,0 chr2 177034363 . A . PASS END=177034376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,990:0,60,255:25,0 chr2 177034377 . A . PASS END=177034383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:24:0,54,810:0,56,255:19,0 chr2 177036245 . G . PASS END=177036253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 177036254 . G . PASS END=177036257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 177036258 . G . PASS END=177036261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 177036262 . A . PASS END=177036262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 177036263 . A . PASS END=177036263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 177036264 . G . PASS END=177036264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 177036265 . A . PASS END=177036303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr2 177036304 . T . PASS END=177036311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1208:0,83,255:29,0 chr2 177036312 . C . PASS END=177036312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 177036313 . G . PASS END=177036322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 177036323 . T . PASS END=177036323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr2 177036324 . G . PASS END=177036326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 177036327 . A . PASS END=177036327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 177036328 . T . PASS END=177036347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,974:0,84,255:29,0 chr2 177036348 . C . PASS END=177036348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:27,0 chr2 177036349 . A . PASS END=177036354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 177036355 . T . PASS END=177036355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 177036356 . A . PASS END=177036365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 177036366 . G . PASS END=177036366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:27,0 chr2 177036367 . C . PASS END=177036367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 177036368 . C . PASS END=177036379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 177036380 . A . PASS END=177036388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 177036389 . A . PASS END=177036389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr2 177036390 . C . PASS END=177036393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 177036394 . C . PASS END=177036394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr2 177036395 . T . PASS END=177036397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 177036398 . A . PASS END=177036398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 177036399 . T . PASS END=177036417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1105:0,90,255:32,0 chr2 177036418 . A . PASS END=177036418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:30,0 chr2 177036419 . A . PASS END=177036441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:33,0 chr2 177036442 . A . PASS END=177036446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1086:0,79,255:29,0 chr2 177036447 . G . PASS END=177036463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1149:0,82,255:30,0 chr2 177036464 . A . PASS END=177036467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 177036468 . C . PASS END=177036472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 177036473 . G . PASS END=177036506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:26,0 chr2 177036507 . G . PASS END=177036534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:18:0,48,698:0,54,255:19,0 chr2 177036535 . G . PASS END=177036535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 177036536 . G . PASS END=177036540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 177036541 . G . PASS END=177036630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:31:12:0,31,435:0,31,255:13,0 chr2 177036631 . T . PASS END=177036633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:12,0 chr2 177036634 . G . PASS END=177036634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 177036635 . G . PASS END=177036635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177036636 . C . PASS END=177036636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,490:0,14,255:13,0 chr2 177036637 . C . PASS END=177036638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 177036639 . G . PASS END=177036640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 177036641 . C . PASS END=177036642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,488:0,26,255:14,0 chr2 177036643 . G . PASS END=177036643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 177036644 . C . PASS END=177036644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 177036645 . C . PASS END=177036645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 177036646 . T . PASS END=177036650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 177036651 . G . PASS END=177036652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 177036653 . C . PASS END=177036653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 177036654 . G . PASS END=177036654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 177036655 . C . PASS END=177036655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 177036656 . C . PASS END=177036665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:17:0,41,651:0,41,255:18,0 chr2 177036666 . C . PASS END=177036666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 177036667 . T . PASS END=177036668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 177036669 . C . PASS END=177036669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr2 177036670 . C . PASS END=177036675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,631:0,41,255:19,0 chr2 177036676 . C . PASS END=177036676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 177036677 . A . PASS END=177036677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,673:0,16,255:18,0 chr2 177036678 . A . PASS END=177036678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 177036679 . C . PASS END=177036688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,860:0,63,255:23,0 chr2 177036689 . A . PASS END=177036689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:22,0 chr2 177036690 . C . PASS END=177036716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:24,0 chr2 177036717 . C . PASS END=177036717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 177036718 . A . PASS END=177036718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 177036719 . T . PASS END=177036733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,892:0,69,255:23,0 chr2 177036734 . G . PASS END=177036734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 177036735 . C . PASS END=177036751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,807:0,66,255:22,0 chr2 177036752 . A . PASS END=177036752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,686:0,49,255:20,0 chr2 177036753 . C . PASS END=177036753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 177036754 . T C, 115.30 PASS DP=24;MQ=247.95;FractionInformativeReads=0.958 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,10,0:0,13,0:65:153,68,0,821,68,821:255,69,0:0,0:1.1530e+02,6.5303e+01,1.2943e-06,4.5000e+02,1.0007e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,8:0,0,14,9 chr2 177036755 . T . PASS END=177036757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 177036758 . A . PASS END=177036758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 177036759 . G . PASS END=177036759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 177036760 . G . PASS END=177036760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 177036761 . G . PASS END=177036766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,930:0,62,255:22,0 chr2 177036767 . C . PASS END=177036768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr2 177036769 . G . PASS END=177036784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,900:0,69,255:24,0 chr2 177036785 . A . PASS END=177036785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 177036786 . C . PASS END=177036791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 177036792 . C . PASS END=177036839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,817:0,68,255:26,0 chr2 177036840 . C . PASS END=177036841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 177036842 . C . PASS END=177036842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 177036843 . G . PASS END=177036845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 177036846 . C . PASS END=177036852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 177036853 . T . PASS END=177036856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 177036857 . C . PASS END=177036857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 177036858 . C . PASS END=177036865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1233:0,86,255:34,0 chr2 177036866 . A . PASS END=177036866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:32,0 chr2 177036867 . C . PASS END=177036964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:34:0,84,1188:0,85,255:40,0 chr2 177036965 . G . PASS END=177036965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:28,0 chr2 177036966 . A . PASS END=177036985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:28,0 chr2 177036986 . A . PASS END=177036986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 177036987 . A . PASS END=177036987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,931:0,50,255:24,0 chr2 177036988 . C . PASS END=177036998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,65,255:25,0 chr2 177036999 . G . PASS END=177037002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr2 177053530 . A . PASS END=177053533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,108:0,9,108:3,0 chr2 177053534 . G . PASS END=177053538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,194:0,15,194:6,0 chr2 177053539 . T . PASS END=177053634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 177053635 . G . PASS END=177053644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 177053645 . C . PASS END=177053647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 177053648 . C . PASS END=177053672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 177053673 . C . PASS END=177053676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 177053677 . T . PASS END=177053689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 177053690 . T . PASS END=177053700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr2 177053701 . G . PASS END=177053701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:7,0 chr2 177053702 . C . PASS END=177053703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 177053704 . G . PASS END=177053704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 177053705 . C . PASS END=177053713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 177053714 . C . PASS END=177053715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 177053716 . C . PASS END=177053718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 177053719 . T . PASS END=177053736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 177053737 . G . PASS END=177053737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:8,0 chr2 177053738 . C . PASS END=177053742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 177053743 . C . PASS END=177053743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr2 177053744 . C . PASS END=177053749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 177053750 . T . PASS END=177053750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr2 177053751 . A . PASS END=177053754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,327:0,27,255:9,0 chr2 177053755 . C . PASS END=177053763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 177053764 . G . PASS END=177053766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 177053767 . C . PASS END=177053773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 177053774 . A . PASS END=177053774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 177053775 . C . PASS END=177053783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:11,0 chr2 177053784 . C . PASS END=177053784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 177053785 . A . PASS END=177053796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:10,0 chr2 177053797 . G . PASS END=177053803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 177053804 . A . PASS END=177053824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:11,0 chr2 177053825 . C . PASS END=177053826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 177053827 . G . PASS END=177053855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 177053856 . G . PASS END=177053868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,341:0,27,255:9,0 chr2 177053869 . G . PASS END=177053872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 177053873 . A . PASS END=177053873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 177053874 . C . PASS END=177053876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 177053877 . C . PASS END=177053906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 177053907 . C . PASS END=177053907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 177053908 . G . PASS END=177053911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177053912 . G . PASS END=177053914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 177053915 . G . PASS END=177053919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 177053920 . C . PASS END=177053924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 177053925 . C . PASS END=177053926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 177053927 . A . PASS END=177053930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 177053931 . C . PASS END=177053971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 177053972 . T . PASS END=177053972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 177053973 . C . PASS END=177053978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:15,0 chr2 177053979 . C . PASS END=177053979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr2 177053980 . C . PASS END=177053982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177053983 . G . PASS END=177053987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 177053988 . T . PASS END=177054007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 177054008 . C . PASS END=177054016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 177054017 . T . PASS END=177054018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 177054019 . C . PASS END=177054024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 177054025 . T . PASS END=177054025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 177054026 . G . PASS END=177054053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:17,0 chr2 177054054 . T C, 50.00 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=0.818;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,9,0:0.529,0.000:17:5,5,0:3,4,0:48:85,0,50,322,286,608:255,0,251:8,0:5.0000e+01,6.5751e-05,5.2874e+01,3.2192e+02,3.2084e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,5,4:6,2,7,2 chr2 177054055 . G . PASS END=177054061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 177054062 . T . PASS END=177054062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 177054063 . C . PASS END=177054067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,729:0,47,255:20,0 chr2 177054068 . C . PASS END=177054071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 177054072 . A . PASS END=177054074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 177054075 . C . PASS END=177054085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 177054086 . G . PASS END=177054088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 177054089 . C . PASS END=177054090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 177054091 . T . PASS END=177054091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 177054092 . A . PASS END=177054100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:19,0 chr2 177054101 . C . PASS END=177054102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 177054103 . G . PASS END=177054112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,637:0,43,255:19,0 chr2 177054113 . C . PASS END=177054125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 177054126 . T . PASS END=177054153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,646:0,57,255:19,0 chr2 177054154 . A . PASS END=177054159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 177054160 . A . PASS END=177054160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 177054161 . A . PASS END=177054173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 177054174 . T . PASS END=177054174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 177054175 . A . PASS END=177054181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,809:0,72,255:25,0 chr2 177054277 . A . PASS END=177054277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 177054278 . C . PASS END=177054278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 177054279 . A . PASS END=177054279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr2 177054280 . G . PASS END=177054283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr2 177054284 . T . PASS END=177054284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,899:0,54,255:27,0 chr2 177054285 . T . PASS END=177054285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,960:0,70,255:28,0 chr2 177054286 . T . PASS END=177054355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:29:0,80,984:0,80,255:37,0 chr2 177054356 . T . PASS END=177054356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1260:0,75,255:31,0 chr2 177054357 . G . PASS END=177054373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1247:0,86,255:33,0 chr2 177054374 . A . PASS END=177054387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1174:0,85,255:34,0 chr2 177054388 . G . PASS END=177054388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,1013:0,68,255:31,0 chr2 177054389 . C . PASS END=177054399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:32,0 chr2 177054400 . A . PASS END=177054400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:27,0 chr2 177054401 . C . PASS END=177054401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 177054402 . T . PASS END=177054402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 177054403 . T . PASS END=177054403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 177054404 . C . PASS END=177054405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr2 177054406 . C . PASS END=177054409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 177054536 . G . PASS END=177054544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 177054545 . C . PASS END=177054546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 177054547 . G . PASS END=177054568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 177054569 . C . PASS END=177054569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 177054570 . C . PASS END=177054571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 177054572 . G . PASS END=177054572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 177054573 . C . PASS END=177054573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 177054574 . G . PASS END=177054574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 177054575 . C . PASS END=177054576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 177054577 . A . PASS END=177054577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:21,0 chr2 177054578 . T . PASS END=177054583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 177054584 . C . PASS END=177054584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr2 177054585 . G . PASS END=177054586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 177054587 . A . PASS END=177054611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,884:0,61,255:26,0 chr2 177054612 . A . PASS END=177054612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:25,0 chr2 177054613 . C . PASS END=177054719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,854:0,61,255:26,0 chr2 177054720 . C . PASS END=177054721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 177054722 . G . PASS END=177054731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,81,255:24,0 chr2 177054732 . A . PASS END=177054733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:22,0 chr2 177054734 . A . PASS END=177054748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 177054749 . G . PASS END=177054754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 177054755 . G . PASS END=177054756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 177054757 . C . PASS END=177054765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 177054766 . A . PASS END=177054766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 177054767 . C . PASS END=177054768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 177054769 . G A, 47.39 PASS DP=21;MQ=250.00;MQRankSum=3.730;ReadPosRankSum=2.933;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,8,0:0.381,0.000:21:5,5,0:8,3,0:46:82,0,50,286,465,751:247,0,255:12,0:4.7392e+01,1.0096e-04,5.3000e+01,2.8618e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,8,3,5:7,6,2,6 chr2 177054770 . C . PASS END=177054772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 177054773 . T . PASS END=177054778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 177054779 . T . PASS END=177054793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,778:0,66,255:22,0 chr2 177054794 . T . PASS END=177054794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 177054795 . T . PASS END=177054797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr2 177054798 . C . PASS END=177054806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:19,0 chr2 177054807 . A . PASS END=177054835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,630:0,40,255:19,0 chr2 177054836 . C . PASS END=177054836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 177054837 . C . PASS END=177054838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 177054839 . G . PASS END=177054870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 177134358 . A . PASS END=177134367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,789:0,69,255:24,0 chr2 177134368 . T . PASS END=177134368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 177134369 . G . PASS END=177134373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 177134374 . A . PASS END=177134374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 177134375 . A . PASS END=177134397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr2 177135138 . A . PASS END=177135147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:87:0,120,1800:0,218,255:40,0 chr2 177161588 . C . PASS END=177161635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:82:0,120,1800:0,209,255:40,0 chr2 177162577 . G . PASS END=177162623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:85:0,120,1800:0,226,255:40,0 chr2 177168969 . T . PASS END=177168971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 177188120 . G . PASS END=177188192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:84:0,120,1800:0,228,255:40,0 chr2 177191553 . G . PASS END=177191629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:73:0,120,1800:0,170,255:40,0 chr2 177193021 . G . PASS END=177193113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:50:0,120,1800:0,137,255:40,0 chr2 177193602 . C . PASS END=177193640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:79:0,120,1800:0,214,255:40,0 chr2 177194029 . A . PASS END=177194154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:28:0,81,1215:0,84,255:40,0 chr2 177195311 . G . PASS END=177195388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:38:0,109,1443:0,109,255:40,0 chr2 177202221 . G . PASS END=177202238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:33:0,96,1407:0,96,255:40,0 chr2 177202239 . A . PASS END=177202239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1621:0,64,255:40,0 chr2 177202240 . C . PASS END=177202392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:96:50:0,96,1800:0,96,255:40,0 chr2 178076957 . T . PASS END=178076958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 178076959 . A . PASS END=178076959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 178076960 . G . PASS END=178076988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1025:0,84,255:34,0 chr2 178076989 . C . PASS END=178076989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1153:0,55,255:32,0 chr2 178076990 . C . PASS END=178077006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1159:0,86,255:34,0 chr2 178077007 . G . PASS END=178077007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1141:0,69,255:31,0 chr2 178077008 . A . PASS END=178077025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1119:0,85,255:34,0 chr2 178077026 . C . PASS END=178077026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr2 178077027 . G . PASS END=178077032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr2 178077033 . T . PASS END=178077033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr2 178077034 . T . PASS END=178077037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 178077038 . C . PASS END=178077041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,77,255:26,0 chr2 178077042 . C . PASS END=178077042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,966:0,59,255:24,0 chr2 178077043 . A . PASS END=178077045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:23,0 chr2 178077528 . A . PASS END=178077528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,853:0,44,255:24,0 chr2 178077529 . T . PASS END=178077529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 178077530 . G . PASS END=178077530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 178077531 . G . PASS END=178077531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 178077532 . A . PASS END=178077532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 178077533 . G . PASS END=178077551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:26,0 chr2 178077552 . C . PASS END=178077552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:23,0 chr2 178077553 . G . PASS END=178077566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:24,0 chr2 178077567 . T . PASS END=178077567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 178077568 . C . PASS END=178077574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,837:0,66,255:22,0 chr2 178077575 . T . PASS END=178077575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 178077576 . C . PASS END=178077597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:22,0 chr2 178077598 . A . PASS END=178077599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:17,0 chr2 178077786 . C . PASS END=178077789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 178077790 . G . PASS END=178077790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:18,0 chr2 178077791 . G . PASS END=178077793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,751:0,47,255:19,0 chr2 178077794 . G . PASS END=178077794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:18,0 chr2 178077795 . C . PASS END=178077798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 178077799 . G . PASS END=178077801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 178077802 . G . PASS END=178077803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 178077804 . C . PASS END=178077809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr2 178077810 . G . PASS END=178077810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 178077811 . G . PASS END=178077811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 178077812 . A . PASS END=178077813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 178077814 . G . PASS END=178077814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:20,0 chr2 178077815 . C . PASS END=178077815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178077816 . G . PASS END=178077816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:18,0 chr2 178077817 . C . PASS END=178077817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178077818 . G . PASS END=178077818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,681:0,8,255:18,0 chr2 178077819 . G . PASS END=178077819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 178077820 . C . PASS END=178077820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178077821 . T . PASS END=178077822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 178077823 . G . PASS END=178077823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:19,0 chr2 178077824 . G . PASS END=178077824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178077825 . T . PASS END=178077825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 178077826 . C . PASS END=178077826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 178077827 . G . PASS END=178077827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:17,0 chr2 178077828 . G . PASS END=178077828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 178077829 . G . PASS END=178077829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:17,0 chr2 178077830 . G . PASS END=178077832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:18,0 chr2 178077833 . G . LowGQ END=178077833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:0:21:0,0,651:6,0,255:16,0 chr2 178077834 . C . PASS END=178077837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:18,0 chr2 178077838 . G . PASS END=178077838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,714:0,32,255:15,0 chr2 178077839 . G . PASS END=178077839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,665:0,8,255:14,0 chr2 178077840 . G . PASS END=178077841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,47,255:15,0 chr2 178077842 . G . PASS END=178077842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,700:0,32,255:15,0 chr2 178077843 . G . PASS END=178077843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:21:0,45,675:0,47,255:15,0 chr2 178077844 . G . PASS END=178077844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,539:0,23,255:15,0 chr2 178077845 . A . PASS END=178077846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,582:0,34,255:15,0 chr2 178077847 . G . PASS END=178077847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 178077848 . C . PASS END=178077849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178077850 . G . PASS END=178077851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 178077852 . C . PASS END=178077853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178077854 . T . PASS END=178077854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,534:0,4,255:15,0 chr2 178077855 . G . PASS END=178077855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,566:0,20,255:16,0 chr2 178077856 . C . PASS END=178077856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 178077857 . C . PASS END=178077859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,582:0,34,255:16,0 chr2 178077860 . C . PASS END=178077860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 178077861 . T . PASS END=178077861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:15,0 chr2 178077862 . G . LowGQ END=178077862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,535:1,0,255:15,0 chr2 178077863 . C . PASS END=178077864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 178077865 . C . PASS END=178077865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 178077866 . G . PASS END=178077867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 178077868 . C . PASS END=178077869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 178077870 . T . PASS END=178077870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,533:0,18,255:14,0 chr2 178077871 . C . PASS END=178077872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 178077873 . G . PASS END=178077873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,545:0,20,255:15,0 chr2 178077874 . A . PASS END=178077874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 178077875 . A . PASS END=178077875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,567:0,20,255:15,0 chr2 178077876 . G . PASS END=178077876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 178077877 . C . PASS END=178077877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 178077878 . G . PASS END=178077878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,512:0,17,255:15,0 chr2 178077879 . A . PASS END=178077879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr2 178077880 . G . PASS END=178077881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,506:0,17,255:13,0 chr2 178077882 . C . PASS END=178077884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,557:0,32,255:13,0 chr2 178077885 . A . PASS END=178077885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:13,0 chr2 178077886 . G . PASS END=178077886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 178077887 . G . PASS END=178077887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:13,0 chr2 178077888 . G . PASS END=178077893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:32:13:0,32,495:0,32,255:13,0 chr2 178077894 . T . PASS END=178077894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,388:0,22,255:9,0 chr2 178077895 . G . PASS END=178077908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,380:0,33,255:12,0 chr2 178077909 . G . PASS END=178077909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 178077910 . G . PASS END=178077910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr2 178077911 . A . PASS END=178077911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 178077912 . G . PASS END=178077912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 178077913 . C . PASS END=178077913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:10,0 chr2 178077914 . G . PASS END=178077914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 178077915 . G . PASS END=178077915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 178077916 . T . PASS END=178077920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 178077921 . A . PASS END=178077921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 178077922 . G . PASS END=178077926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,45,255:13,0 chr2 178077927 . T . PASS END=178077927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:9,0 chr2 178077928 . G . PASS END=178077934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:13,0 chr2 178077935 . G . PASS END=178077937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 178077938 . G . PASS END=178077938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 178077939 . G . PASS END=178077944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 178077945 . G . PASS END=178077952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 178077953 . G . PASS END=178077955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 178077956 . A . PASS END=178077958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 178077959 . T . PASS END=178077959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 178077960 . C . PASS END=178077960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178077961 . C . PASS END=178077961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 178077962 . G . PASS END=178077962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178077963 . G . PASS END=178077963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 178077964 . G . PASS END=178077969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 178077970 . G . LowGQ END=178077970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:12,0 chr2 178077971 . A . PASS END=178077976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 178077977 . C . PASS END=178077983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 178077984 . C . PASS END=178077984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 178077985 . G . PASS END=178077987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 178077988 . C . PASS END=178078003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 178078004 . C . PASS END=178078004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 178078005 . G . PASS END=178078005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178078006 . C . LowGQ END=178078006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:11,0 chr2 178078007 . C . PASS END=178078008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178078009 . C . PASS END=178078009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 178078010 . C . PASS END=178078013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 178078014 . T . PASS END=178078015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 178078016 . A . PASS END=178078016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 178078017 . C . PASS END=178078028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,423:0,42,255:14,0 chr2 178078029 . T . PASS END=178078030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 178078031 . G . PASS END=178078045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:16,0 chr2 178078046 . C . PASS END=178078046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 178078047 . C . PASS END=178078060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,592:0,48,255:18,0 chr2 178078061 . G . PASS END=178078061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 178078062 . C . PASS END=178078069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 178078070 . G . PASS END=178078070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,565:0,21,255:14,0 chr2 178078071 . C . PASS END=178078087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:19,0 chr2 178078088 . G . PASS END=178078098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,770:0,63,255:21,0 chr2 178078099 . G . PASS END=178078099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:21,0 chr2 178078100 . A . PASS END=178078117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 178078118 . A . PASS END=178078119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 178078120 . C . PASS END=178078124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 178078125 . A . PASS END=178078125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 178078126 . A . PASS END=178078126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 178078127 . T . PASS END=178078129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,723:0,49,255:19,0 chr2 178078130 . C . PASS END=178078145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,840:0,61,255:26,0 chr2 178078146 . G . PASS END=178078153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178078154 . T . PASS END=178078164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 178078165 . T . PASS END=178078173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:28,0 chr2 178078174 . C . PASS END=178078177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 178078178 . T . PASS END=178078188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr2 178078189 . T . PASS END=178078189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:27,0 chr2 178078190 . T . PASS END=178078191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 178078192 . A . PASS END=178078200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr2 178078201 . C . PASS END=178078219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 178078220 . T . PASS END=178078237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 178078238 . C T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=1.292;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,11,0:0.550,0.000:20:5,2,0:4,9,0:48:85,0,50,364,322,685:255,0,255:7,0:5.0000e+01,6.7045e-05,5.2648e+01,3.6353e+02,3.5661e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,3,8:6,3,6,5 chr2 178078239 . G . PASS END=178078245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,615:0,40,255:16,0 chr2 178080267 . G . PASS END=178080292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,755:0,63,255:26,0 chr2 178080293 . G . PASS END=178080294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 178080295 . T . PASS END=178080295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 178080296 . G . PASS END=178080298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 178080299 . A . PASS END=178080299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,887:0,70,255:28,0 chr2 178080300 . A . PASS END=178080301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 178080302 . A . PASS END=178080302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 178080303 . C . PASS END=178080313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:29:0,82,1157:0,82,255:33,0 chr2 178080314 . T . PASS END=178080314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,0 chr2 178080315 . G . PASS END=178080389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:91:34:0,91,1154:0,91,255:40,0 chr2 178080478 . G . PASS END=178080508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,724:0,66,255:22,0 chr2 178080509 . G . PASS END=178080509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 178080510 . G . PASS END=178080533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,693:0,63,255:21,0 chr2 178080534 . T . PASS END=178080545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 178080546 . G . PASS END=178080548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 178080549 . G . PASS END=178080554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:17,0 chr2 178080555 . A . PASS END=178080579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,35,255:13,0 chr2 178080580 . G . PASS END=178080580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 178080581 . T . PASS END=178080582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,535:0,31,255:14,0 chr2 178080583 . G . PASS END=178080583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178080584 . A . PASS END=178080584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 178080585 . T . PASS END=178080602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,607:0,51,255:17,0 chr2 178080603 . A . PASS END=178080603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 178080604 . A . PASS END=178080624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,589:0,51,255:17,0 chr2 178080706 . G . PASS END=178080725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,886:0,72,255:24,0 chr2 178080726 . C . PASS END=178080726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 178080727 . C . PASS END=178080741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,831:0,66,255:22,0 chr2 178080742 . A . PASS END=178080742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:21,0 chr2 178080743 . A . PASS END=178080762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,732:0,66,255:23,0 chr2 178080763 . A . PASS END=178080763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:22,0 chr2 178080764 . A . PASS END=178080780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 178080781 . T . PASS END=178080784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:22:0,56,779:0,56,255:21,0 chr2 178080785 . A . PASS END=178080787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 178080788 . T . PASS END=178080791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,828:0,53,255:19,0 chr2 178080792 . A . PASS END=178080794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 178080795 . C . PASS END=178080798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 178080799 . T . PASS END=178080799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,698:0,36,255:17,0 chr2 178080800 . T . PASS END=178080805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 178080806 . A . PASS END=178080811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,747:0,60,255:21,0 chr2 178080812 . G . PASS END=178080812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 178080813 . C . PASS END=178080816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 178080817 . A . PASS END=178080817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 178080818 . T . PASS END=178080833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:25,0 chr2 178080834 . T . PASS END=178080834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:24,0 chr2 178080835 . A . PASS END=178080835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,938:0,37,255:24,0 chr2 178080836 . T . PASS END=178080836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:25,0 chr2 178080837 . G . PASS END=178080844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:28,0 chr2 178080845 . G . PASS END=178080845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:27,0 chr2 178080846 . G . PASS END=178080846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 178080847 . C . PASS END=178080862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1035:0,72,255:25,0 chr2 178080863 . G . PASS END=178080864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr2 178080865 . G . PASS END=178080869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,68,255:22,0 chr2 178080870 . T . PASS END=178080872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 178080873 . T . PASS END=178080888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr2 178080889 . G . PASS END=178080889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 178080890 . A . PASS END=178080891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 178080892 . C . PASS END=178080896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 178080897 . T . PASS END=178080897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:17,0 chr2 178080898 . A . PASS END=178080902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,642:0,49,255:19,0 chr2 178080903 . T . PASS END=178080907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 178080908 . A . PASS END=178080911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 178080912 . T . PASS END=178080916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178081231 . T . PASS END=178081320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:31:0,90,1158:0,93,255:40,0 chr2 178081404 . G . PASS END=178081499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,130,255:40,0 chr2 178081588 . G . PASS END=178081589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:24,0 chr2 178081590 . G . PASS END=178081594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:36:0,81,1215:0,91,255:28,0 chr2 178081595 . T . PASS END=178081596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,108,255:25,0 chr2 178081597 . G . PASS END=178081625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1239:0,86,255:32,0 chr2 178081626 . T . PASS END=178081626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 178081627 . A . PASS END=178081635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 178081636 . G . PASS END=178081639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 178081640 . T . PASS END=178081640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1016:0,43,255:24,0 chr2 178081641 . G . PASS END=178081641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:26,0 chr2 178081642 . G . PASS END=178081642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,988:0,51,255:22,0 chr2 178081643 . T . PASS END=178081651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:65:27:0,65,929:0,65,255:26,0 chr2 178081652 . T . PASS END=178081652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:22,0 chr2 178081653 . G . PASS END=178081654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 178081655 . A . PASS END=178081655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 178081656 . T . PASS END=178081656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,985:0,73,255:26,0 chr2 178081657 . T . PASS END=178081657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,763:0,40,255:23,0 chr2 178081658 . T . PASS END=178081663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1003:0,73,255:26,0 chr2 178081664 . T . PASS END=178081664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,821:0,34,255:21,0 chr2 178081665 . G . PASS END=178081665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:22,0 chr2 178081666 . A . PASS END=178081667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:24,0 chr2 178081668 . G . PASS END=178081668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,795:0,50,255:22,0 chr2 178082433 . G . PASS END=178082439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr2 178082440 . C . PASS END=178082440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 178082441 . T . PASS END=178082441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:28,0 chr2 178082442 . A . PASS END=178082443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:29,0 chr2 178082444 . G . PASS END=178082445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:31:0,65,1094:0,65,255:28,0 chr2 178082446 . C . PASS END=178082448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 178082449 . T . PASS END=178082449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:27,0 chr2 178082450 . G . PASS END=178082450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 178082451 . G . PASS END=178082461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:35:0,95,1228:0,95,255:38,0 chr2 178082462 . A . PASS END=178082462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1230:0,78,255:37,0 chr2 178082463 . G . PASS END=178082548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:31:0,84,1260:0,91,255:40,0 chr2 178082549 . A . PASS END=178082549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 178082550 . A . PASS END=178082550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 178082551 . T . PASS END=178082551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:27,0 chr2 178082552 . G . PASS END=178082552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 178082553 . A . PASS END=178082553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:26,0 chr2 178082554 . A . PASS END=178082561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:83:28:0,83,875:0,83,255:28,0 chr2 178082562 . A . PASS END=178082562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 178082563 . T . PASS END=178082563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,812:0,53,255:27,0 chr2 178082564 . T . PASS END=178082573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,784:0,67,255:28,0 chr2 178083765 . G . PASS END=178083770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:25,0 chr2 178083771 . A . PASS END=178083887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,970:0,81,255:40,0 chr2 178083975 . G . PASS END=178084027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:32:0,81,1215:0,91,255:40,0 chr2 178095513 . C . PASS END=178096736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:90:39:0,90,1313:0,90,255:40,0 chr2 178097120 . C . PASS END=178097120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:24,0 chr2 178097121 . T . PASS END=178097129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,878:0,61,255:26,0 chr2 178097130 . G . PASS END=178097132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 178097133 . A . PASS END=178097137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 178097138 . T . PASS END=178097138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 178097139 . A . PASS END=178097140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:26,0 chr2 178097141 . T . PASS END=178097150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1100:0,87,255:32,0 chr2 178097151 . C . PASS END=178097151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:31,0 chr2 178097152 . A . PASS END=178097153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 178097154 . A . PASS END=178097154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr2 178097155 . C . PASS END=178097212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:32:0,87,1119:0,92,255:37,0 chr2 178097213 . A . PASS END=178097213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 178097214 . G . PASS END=178097303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:33:0,80,1183:0,80,255:37,0 chr2 178097304 . G . PASS END=178097304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1162:0,61,255:31,0 chr2 178097305 . A . PASS END=178097311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:32,0 chr2 178097906 . T . PASS END=178098067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:46:0,114,1780:0,114,255:40,0 chr2 178098733 . C . PASS END=178098739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 178098740 . T . PASS END=178098744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 178098745 . G . PASS END=178098754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:27,0 chr2 178098755 . C . PASS END=178098755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 178098756 . T . PASS END=178098756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 178098757 . G . PASS END=178098757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr2 178098758 . G . PASS END=178098758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 178098759 . T . PASS END=178098759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 178098760 . T . PASS END=178098760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 178098761 . T . PASS END=178098761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,925:0,45,255:27,0 chr2 178098762 . C . PASS END=178098976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:30:0,81,1072:0,85,255:40,0 chr2 178098977 . A . PASS END=178098993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,917:0,64,255:26,0 chr2 178098994 . C . PASS END=178098999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:18,0 chr2 178129260 . C . PASS END=178129261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 178129262 . G . PASS END=178129262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 178129263 . C . PASS END=178129263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 178129264 . T . PASS END=178129264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 178129265 . G . PASS END=178129269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 178129270 . G . PASS END=178129270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 178129271 . G . PASS END=178129271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 178129272 . G . PASS END=178129272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 178129273 . A . PASS END=178129274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 178129275 . T . PASS END=178129275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 178129276 . C . PASS END=178129282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,643:0,51,255:17,0 chr2 178129283 . G . PASS END=178129283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr2 178129284 . C . PASS END=178129285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178129286 . G . PASS END=178129286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 178129287 . C . PASS END=178129287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178129288 . A . PASS END=178129288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 178129289 . G . PASS END=178129290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,651:0,51,255:17,0 chr2 178129291 . T . PASS END=178129291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 178129292 . C . PASS END=178129293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr2 178129294 . A . PASS END=178129294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 178129295 . A . PASS END=178129295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 178129296 . G . PASS END=178129296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178129297 . T . PASS END=178129297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 178129298 . C . PASS END=178129299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178129300 . A . PASS END=178129301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 178129302 . C . PASS END=178129302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 178129303 . A . PASS END=178129303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:14,0 chr2 178129304 . T . PASS END=178129304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 178257504 . A . PASS END=178257504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 178257511 . G . PASS END=178257511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,574:0,48,255:16,0 chr2 178257518 . A . PASS END=178257520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 178257521 . G . LowGQ END=178257521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,565:1,0,255:16,0 chr2 178257522 . C . PASS END=178257522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 178257523 . G . PASS END=178257523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 178257524 . G . PASS END=178257526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 178257527 . G . PASS END=178257527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 178257528 . C . PASS END=178257540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,615:0,54,255:19,0 chr2 178257541 . G . PASS END=178257541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 178257542 . G . PASS END=178257542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 178257543 . G . PASS END=178257547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:23,0 chr2 178257548 . A . PASS END=178257548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 178257549 . C . PASS END=178257549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 178257550 . T . PASS END=178257550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 178257551 . G . PASS END=178257554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr2 178257555 . T . PASS END=178257555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:23,0 chr2 178257556 . G . PASS END=178257564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 178257565 . C . PASS END=178257565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 178257566 . G . PASS END=178257580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:24,0 chr2 178257581 . G . PASS END=178257581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 178257582 . C . PASS END=178257584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 178257585 . C . PASS END=178257585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr2 178257586 . G . PASS END=178257593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 178257594 . A . PASS END=178257594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 178257595 . C . PASS END=178257599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 178257600 . A . PASS END=178257600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 178257601 . C . PASS END=178257620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr2 178257621 . G . PASS END=178257636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 178257637 . T . PASS END=178257673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,937:0,65,255:26,0 chr2 178257674 . C . PASS END=178257679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 178257680 . A . PASS END=178257684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 178257685 . T . PASS END=178257748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,621:0,48,255:19,0 chr2 178257749 . C . PASS END=178257763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:13:0,32,482:0,32,255:13,0 chr2 178257764 . A . PASS END=178257764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 178257765 . T . PASS END=178257770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,472:0,39,255:13,0 chr2 178257771 . A . PASS END=178257771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 178257772 . G . PASS END=178257775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 178257776 . C . PASS END=178257776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 178257777 . G . PASS END=178257777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 178284997 . G . PASS END=178285086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,2:95:99:73:0,120,1800:0,203,255:40,0 chr2 178299055 . G . PASS END=178299145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,111,1665:0,135,255:40,0 chr2 178301492 . G . PASS END=178301612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:45:0,120,1800:0,126,255:40,0 chr2 178301708 . G . PASS END=178301782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:69:0,120,1800:0,156,255:40,0 chr2 178301795 . C . PASS END=178301795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 178305686 . T . PASS END=178305686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 178305693 . C . PASS END=178305764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:68:0,120,1800:0,173,255:40,0 chr2 178307135 . G . PASS END=178307214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:55:0,120,1800:0,144,255:40,0 chr2 178310274 . A . PASS END=178310354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:35:0,99,1485:0,105,255:40,0 chr2 178310358 . T . PASS END=178310358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 178326621 . C . PASS END=178326746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:35:0,89,1242:0,89,255:40,0 chr2 178333144 . G . PASS END=178333245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:95:36:0,95,1311:0,95,255:40,0 chr2 178333246 . T . PASS END=178333246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1150:0,71,255:31,0 chr2 178333247 . C . PASS END=178333252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:33,0 chr2 178346787 . G . PASS END=178346914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:50:0,120,1800:0,129,255:40,0 chr2 178357876 . A . PASS END=178357895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:71:0,120,1800:0,204,255:40,0 chr2 178357896 . T . PASS END=178357927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:78:0,120,1800:0,207,255:40,0 chr2 178362417 . G . PASS END=178362493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:81:0,120,1800:0,226,255:40,0 chr2 178364346 . T . PASS END=178364374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,132,255:40,1 chr2 178364375 . T . PASS END=178364458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:66:0,120,1800:0,174,255:40,0 chr2 178364470 . A . PASS END=178364470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 178370234 . T . PASS END=178370303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:71:0,120,1800:0,213,255:40,0 chr2 178372698 . G . PASS END=178372759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,190,255:40,0 chr2 178378547 . G . PASS END=178378636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:60:0,120,1800:0,163,255:40,0 chr2 178385997 . G . PASS END=178386096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,120,1800:0,140,255:40,0 chr2 178388476 . G . PASS END=178388533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,105,1575:0,145,255:40,0 chr2 178388539 . C . PASS END=178388539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 178402802 . T . PASS END=178402823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,149,255:40,0 chr2 178402824 . G . PASS END=178402923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:61:0,120,1800:0,178,255:40,0 chr2 178403041 . A . PASS END=178403041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,184,255:40,0 chr2 178403088 . T . PASS END=178403088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:71:0,120,1800:0,166,255:40,0 chr2 178403129 . T . PASS END=178403129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 178403284 . C . PASS END=178403284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 178403301 . G . PASS END=178403301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 178403351 . C . PASS END=178403351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 178403386 . T . PASS END=178403386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 178403392 . A . PASS END=178403392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 178403436 . T . PASS END=178403436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 178403483 . T . PASS END=178403483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1499:0,93,255:40,0 chr2 178403564 . T . PASS END=178403564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 178403606 . A . PASS END=178403606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,137,255:40,0 chr2 178403654 . A . PASS END=178403654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 178403717 . C . PASS END=178403717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 178403746 . T . PASS END=178403746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1251:0,91,255:34,0 chr2 178403844 . A . PASS END=178403844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 178403870 . T . PASS END=178403870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1607:0,119,255:39,0 chr2 178403996 . T . PASS END=178403996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 178404020 . A . PASS END=178404020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:73:0,120,1800:0,142,255:40,4 chr2 178404028 . T . PASS END=178404028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:74:0,120,1800:0,184,255:40,0 chr2 178404161 . T . PASS END=178404161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 178404235 . T . PASS END=178404235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 178404347 . G . PASS END=178404347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 178404392 . T . PASS END=178404392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 178404551 . C . PASS END=178404551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 178404667 . A . PASS END=178404667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 178404734 . T . PASS END=178404734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:3:23:0,3,45:0,53,255:1,0 chr2 178404758 . A . PASS END=178404758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:21:21:0,21,315:0,63,255:7,0 chr2 178404759 . GTA G,GTATA, 26.60 PASS DP=20;MQ=243.51;MQRankSum=2.764;ReadPosRankSum=0.452;FractionInformativeReads=0.850;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:6,5,6,0:0.294,0.353,0.000:17:2,1,2,0:4,4,4,0:16:33,30,66,0,9,43,48,79,39,88:234,0,255:4,10:2.6599e+01,3.0411e+01,6.9527e+01,1.1162e-01,1.6527e+01,4.5748e+01,7.6365e+01,1.1350e+02,7.4106e+01,1.1859e+02:0.00,7.00,10.00,7.00,14.00,10.00,34.77,41.77,41.77,37.77:2,4,4,7:6,0,8,3 chr2 178404781 . A . PASS END=178404781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,690:0,14,255:5,0 chr2 178404783 . G . PASS END=178404783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:18:23:0,18,270:0,69,255:6,0 chr2 178404785 . A . PASS END=178404785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:15:23:0,15,225:0,69,255:5,0 chr2 178404788 . C . LowGQ END=178404788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:21,2:23:0:23:0,0,0:0,14,255:0,3 chr2 178404789 . A G, 89.54 PASS DP=21;MQ=243.82;MQRankSum=2.369;ReadPosRankSum=0.000;FractionInformativeReads=0.857;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:3,15,0:0.833,0.000:18:0,8,0:3,7,0:40:127,43,0,227,227,227:255,72,0:0,3:8.9539e+01,3.9539e+01,4.8280e-04,2.2431e+02,2.5908e+02,2.2732e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,2,9,6:2,1,10,5 chr2 178404790 . T . LowGQ END=178404790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:0:23:0,0,594:35,0,255:4,3 chr2 178404792 . T . PASS END=178404792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:15:19:0,15,225:0,22,255:5,1 chr2 178404799 . G . PASS END=178404799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:12:20:0,12,180:0,21,255:4,1 chr2 178404801 . GTATATA GTA,G, 84.94 PASS DP=20;MQ=243.51;FractionInformativeReads=0.650 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,11,2,0:0.846,0.154,0.000:13:0,6,1,0:0,5,1,0:25:97,38,0,185,19,75,285,285,285,285:255,0,255:1,11:8.4943e+01,3.4943e+01,1.4007e-02,1.8240e+02,2.5377e+01,7.5377e+01,3.0817e+02,3.1717e+02,3.1717e+02,3.1118e+02:0.00,9.00,12.01,9.00,18.00,12.01,34.77,43.77,43.77,37.78:0,0,10,3:0,0,8,5 chr2 178404803 . A . LowGQ END=178404803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,13:20:0:20:0,0,0:255,0,159:0,11 chr2 178404805 . A . LowGQ END=178404805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:7,13:20:0:20:0,0,0:255,0,181:0,11 chr2 178404807 . A . LowGQ END=178404807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,559:12,0,255:11,2 chr2 178405011 . T . PASS END=178405011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 178405234 . G . PASS END=178405234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 178405241 . A . PASS END=178405241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 178405360 . A . PASS END=178405360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 178405378 . C . PASS END=178405378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1296:0,92,255:35,0 chr2 178405410 . C . PASS END=178405410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 178405505 . C . PASS END=178405505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 178405544 . C . PASS END=178405544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 178405590 . G . PASS END=178405590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 178405653 . G . PASS END=178405653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 178405756 . G . PASS END=178405756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 178405983 . A . PASS END=178405983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 178406185 . C . PASS END=178406185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 178406304 . G . PASS END=178406304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 178406447 . T . PASS END=178406447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 178406529 . A . PASS END=178406529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 178406829 . C . PASS END=178406829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1413:0,114,255:38,0 chr2 178406854 . A . PASS END=178406854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 178406876 . A . PASS END=178406876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 178406894 . A . PASS END=178406894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 178406900 . T . PASS END=178406900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 178406979 . T . PASS END=178406979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 178407023 . A . PASS END=178407023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 178407055 . A . PASS END=178407055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 178407151 . A . PASS END=178407151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 178407155 . A . PASS END=178407155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 178407548 . C . PASS END=178407548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 178407597 . A . PASS END=178407597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 178407703 . G . PASS END=178407703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 178407711 . G . PASS END=178407711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 178407808 . A . PASS END=178407808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,832:0,72,255:24,0 chr2 178407833 . C . PASS END=178407833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178407919 . C . PASS END=178407919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 178407949 . C . PASS END=178407949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 178407995 . T . PASS END=178407995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 178408078 . C . PASS END=178408078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 178408082 . T . PASS END=178408082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 178408376 . C . PASS END=178408376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 178408388 . C . PASS END=178408388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 178408429 . T . PASS END=178408429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 178408532 . G . PASS END=178408532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 178415494 . C . PASS END=178416258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:37:0,104,1374:0,104,255:40,0 chr2 178416259 . C . PASS END=178416282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:70:0,102,1530:0,193,255:40,0 chr2 178416283 . A . PASS END=178416283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,6:76:18:76:0,18,2324:0,18,255:33,0 chr2 178416284 . T . PASS END=178416304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:84:58:0,84,1260:0,144,255:33,0 chr2 178416305 . TGTATG T, 49.97 PASS DP=56;MQ=167.47;MQRankSum=-1.439;ReadPosRankSum=2.281;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,27,0:0.491,0.000:55:18,12,0:10,15,0:48:79,0,50,1134,1176,2310:255,0,255:27,38:4.9974e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:14,14,11,16:14,14,12,15 chr2 178416306 . G . LowGQ END=178416311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:30,38:68:0:57:0,0,0:255,0,255:40,38 chr2 178416312 . T . PASS END=178416357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:48:0,120,1800:0,120,255:40,0 chr2 178416358 . C . PASS END=178416751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:85:35:0,85,1413:0,85,255:40,0 chr2 178416752 . T . PASS END=178416752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:33,0 chr2 178416753 . G . PASS END=178416770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1184:0,83,255:33,0 chr2 178416771 . T . PASS END=178416771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:25,0 chr2 178416772 . G . PASS END=178416789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:28,0 chr2 178416790 . A . PASS END=178416811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,967:0,65,255:26,0 chr2 178416812 . A . PASS END=178416812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 178416813 . C . PASS END=178416813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 178416814 . A . PASS END=178416814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:23,0 chr2 178416815 . C . PASS END=178416826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 178416827 . T . PASS END=178416827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 178416828 . G . PASS END=178416845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,929:0,62,255:24,0 chr2 178416846 . C . PASS END=178416846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:23,0 chr2 178416847 . A . PASS END=178416851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 178416852 . T . PASS END=178416852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:21,0 chr2 178416853 . C . PASS END=178416853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 178416854 . T . PASS END=178416854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 178416855 . C . PASS END=178416855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 178416856 . A . PASS END=178416856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 178416857 . G . PASS END=178416863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,831:0,69,255:23,0 chr2 178416864 . G . PASS END=178416864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 178416865 . C . PASS END=178416866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 178416867 . T . PASS END=178416873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:51:24:0,51,765:0,59,255:21,0 chr2 178416874 . T . PASS END=178416874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:16,0 chr2 178416875 . G . PASS END=178416912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,576:0,40,255:19,0 chr2 178416913 . G . PASS END=178416913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178416914 . T . PASS END=178416915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 178416916 . G . PASS END=178416916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178416917 . T . PASS END=178416917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:20,0 chr2 178416918 . A . PASS END=178416920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178416921 . A . PASS END=178416921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 178416922 . A . PASS END=178416926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 178416927 . C . PASS END=178416928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 178416929 . G . PASS END=178416941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 178416942 . A . PASS END=178416942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 178416943 . G . PASS END=178416944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 178416945 . C . PASS END=178416945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 178416946 . C . PASS END=178416949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 178416950 . A . PASS END=178416950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:21,0 chr2 178416951 . G . PASS END=178416957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 178416958 . A . PASS END=178416958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:19,0 chr2 178416959 . A . PASS END=178416961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 178416962 . A . PASS END=178416962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:19,0 chr2 178416963 . A . PASS END=178416965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,736:0,63,255:21,0 chr2 178416966 . T . PASS END=178416966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 178416967 . G . PASS END=178416973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178416974 . G . PASS END=178416984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:21:0,42,630:0,56,255:19,0 chr2 178416985 . C . PASS END=178416986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,69,255:20,0 chr2 178416987 . G . PASS END=178416987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:19,0 chr2 178416988 . T . PASS END=178416991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:20,0 chr2 178416992 . T . PASS END=178416992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 178416993 . C . PASS END=178416995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 178416996 . T . PASS END=178416996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 178416997 . G . PASS END=178417003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr2 178417004 . A . PASS END=178417005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 178417006 . A . PASS END=178417006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr2 178417007 . C . PASS END=178417007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 178417008 . A . PASS END=178417012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 178417013 . A . PASS END=178417013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,848:0,47,255:23,0 chr2 178417014 . G . PASS END=178417037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:23:0,62,832:0,62,255:24,0 chr2 178417038 . T . PASS END=178417038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,703:0,55,255:22,0 chr2 178417039 . C . PASS END=178417041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 178417042 . G . PASS END=178417042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:22,0 chr2 178417043 . C . PASS END=178417050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 178417051 . T . PASS END=178417051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 178417052 . T . PASS END=178417055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 178417056 . C . PASS END=178417056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 178417057 . T . PASS END=178417060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 178417061 . C . PASS END=178417061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 178417062 . C . PASS END=178417062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:19,0 chr2 178417063 . T . PASS END=178417067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 178417068 . T . PASS END=178417068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 178417069 . A . PASS END=178417070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 178417071 . T . PASS END=178417071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr2 178417072 . C . PASS END=178417072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 178417073 . G . PASS END=178417073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 178417074 . G . PASS END=178417077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 178417078 . C . PASS END=178417080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 178417081 . C . PASS END=178417081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 178417082 . T . PASS END=178417082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 178417083 . C . PASS END=178417084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 178417085 . A . PASS END=178417085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,690:0,36,255:19,0 chr2 178417086 . C . PASS END=178417088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 178417089 . G . PASS END=178417090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 178417091 . C . PASS END=178417100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,854:0,61,255:24,0 chr2 178417101 . C . PASS END=178417101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 178417102 . T . PASS END=178417102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 178417103 . G . PASS END=178417103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 178417104 . G . PASS END=178417104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 178417105 . C . PASS END=178417110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr2 178417111 . G . PASS END=178417111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:23,0 chr2 178417112 . C . PASS END=178417114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 178417115 . T . PASS END=178417115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:24,0 chr2 178417116 . C . PASS END=178417116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 178417117 . G . PASS END=178417117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 178417118 . C . PASS END=178417118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,900:0,37,255:22,0 chr2 178417119 . T . PASS END=178417119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 178417120 . G . PASS END=178417120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,972:0,48,255:24,0 chr2 178417121 . T . PASS END=178417128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,947:0,67,255:24,0 chr2 178417129 . A . PASS END=178417129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:25,0 chr2 178417130 . G . PASS END=178417133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr2 178417134 . C . PASS END=178417134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 178417135 . T . PASS END=178417135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:26,0 chr2 178417136 . T . PASS END=178417136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 178417137 . G . PASS END=178417137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr2 178417138 . C . PASS END=178417138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178417139 . A . PASS END=178417139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr2 178417140 . G . PASS END=178417141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178417142 . C T, 130.81 PASS DP=28;MQ=150.45;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,13,0:0,15,0:81:169,84,0,1049,84,1049:255,84,0:0,0:1.3081e+02,8.0813e+01,0.0000e+00,4.5000e+02,1.1558e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,17:0,0,16,12 chr2 178417143 . G . PASS END=178417143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178417144 . G . PASS END=178417193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,902:0,67,255:26,0 chr2 178417194 . G . PASS END=178417194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178417195 . G . PASS END=178417195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 178417196 . G . PASS END=178417197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178417198 . G . PASS END=178417218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr2 178417219 . C . PASS END=178417224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:24:0,45,675:0,72,255:16,0 chr2 178417225 . C T, 116.78 PASS DP=24;MQ=110.34;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,11,0:0,13,0:69:155,72,0,928,72,928:255,72,0:0,0:1.1678e+02,6.9233e+01,5.1772e-07,4.5000e+02,1.0400e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,16:0,0,11,13 chr2 178417226 . A . PASS END=178417235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,48,255:15,0 chr2 178417236 . C . PASS END=178417241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 178417242 . A . PASS END=178417245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 178417246 . G . PASS END=178417262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:12,0 chr2 178417263 . C . PASS END=178417315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr2 178417316 . T . PASS END=178417316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 178417317 . G . PASS END=178417327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:11,0 chr2 178417328 . T . PASS END=178417354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr2 178417355 . G . PASS END=178417357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 178417358 . C . PASS END=178417359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 178417360 . G . PASS END=178417371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,474:0,36,255:13,0 chr2 178417372 . C . PASS END=178417374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 178417375 . C . PASS END=178417375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 178417376 . T . PASS END=178417380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178417381 . T . PASS END=178417382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,458:0,26,255:13,0 chr2 178417383 . C . PASS END=178417384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 178417385 . C . PASS END=178417392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178417393 . C . PASS END=178417394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 178417395 . G . PASS END=178417397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178417398 . G . PASS END=178417398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr2 178417399 . C . PASS END=178417399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178417400 . A . PASS END=178417400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 178417401 . C . PASS END=178417425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,474:0,39,255:13,0 chr2 178417426 . G . PASS END=178417431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 178417432 . G . PASS END=178417462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 178417463 . G A, 49.86 PASS DP=15;MQ=221.25;MQRankSum=-0.405;ReadPosRankSum=2.488;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:4,1,0:4,6,0:48:85,0,50,242,286,528:218,0,255:8,0:4.9855e+01,6.6527e-05,5.3000e+01,2.4233e+02,3.2093e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,5,2,5:5,3,4,3 chr2 178417464 . G . PASS END=178417469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 178417470 . G . PASS END=178417482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 178417483 . G . PASS END=178417491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 178423480 . G . PASS END=178423514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:49:0,111,1665:0,131,255:40,0 chr2 178481432 . C . PASS END=178481449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:36:0,92,1335:0,92,255:40,0 chr2 178481450 . A . PASS END=178481450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1482:0,63,255:40,0 chr2 178481451 . A . PASS END=178481780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:38:0,81,1228:0,81,255:40,0 chr2 178481781 . A . PASS END=178481817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,138,255:40,0 chr2 178481818 . G T, 227.27 PASS DP=61;MQ=84.81;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,34,0:0,27,0:178:265,181,0,2179,181,2179:255,183,0:0,0:2.2727e+02,1.7827e+02,0.0000e+00,4.5000e+02,2.1304e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,37,24:0,0,30,31 chr2 178481819 . A . PASS END=178481855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,111,1606:0,111,255:40,0 chr2 178481856 . T . PASS END=178481935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:36:0,81,1215:0,93,255:40,0 chr2 178481936 . A . PASS END=178482040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,62,255:26,0 chr2 178482041 . A . PASS END=178482041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 178482042 . T . PASS END=178482042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:20,0 chr2 178482043 . T . PASS END=178482044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 178482045 . A . PASS END=178482045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:20,0 chr2 178482046 . A . PASS END=178482048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 178482049 . T . PASS END=178482049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 178482050 . C . PASS END=178482051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 178482052 . A . PASS END=178482052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 178482053 . C . PASS END=178482054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 178482055 . C . PASS END=178482056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 178482057 . T . PASS END=178482057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178482058 . C . PASS END=178482058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:25,0 chr2 178482059 . A . PASS END=178482061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 178482062 . G . PASS END=178482065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,963:0,67,255:26,0 chr2 178482066 . T . PASS END=178482066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 178482067 . T . PASS END=178482082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:23:0,66,990:0,67,255:24,0 chr2 178482083 . T . PASS END=178482083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 178482084 . T . PASS END=178482092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:24:0,64,833:0,64,255:26,0 chr2 178482093 . A . PASS END=178482093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:16:27:0,16,614:0,16,255:24,0 chr2 178482094 . C T, 119.05 PASS DP=27;MQ=52.04;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,10,0:0,17,0:77:157,80,0,257,257,257:255,81,0:0,0:1.1905e+02,7.7171e+01,0.0000e+00,2.5382e+02,2.8859e+02,2.5683e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,23,4:0,0,14,13 chr2 178482095 . C . PASS END=178482096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 178482097 . T . PASS END=178482097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 178482098 . T . PASS END=178482099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 178482100 . C . PASS END=178482101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:27,0 chr2 178482102 . A . PASS END=178482103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,952:0,84,255:29,0 chr2 178482104 . C . PASS END=178482104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 178482105 . A . PASS END=178482105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 178482106 . T . PASS END=178482106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr2 178482107 . T . PASS END=178482107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 178482108 . G . PASS END=178482108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr2 178482109 . G . PASS END=178482117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1131:0,80,255:30,0 chr2 178482118 . C . PASS END=178482118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 178482119 . A . PASS END=178482120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 178482121 . G . PASS END=178482121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:27,0 chr2 178482122 . A . PASS END=178482122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,960:0,57,255:27,0 chr2 178482123 . T . PASS END=178482124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 178482125 . C . PASS END=178482129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 178482130 . A . PASS END=178482130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:28,0 chr2 178482131 . G . PASS END=178482131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 178482132 . A . PASS END=178482138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1211:0,88,255:34,0 chr2 178482139 . C . PASS END=178482139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:34,0 chr2 178482140 . C . PASS END=178482522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:34:0,84,1219:0,84,255:40,0 chr2 178482523 . T . PASS END=178482528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,117,1755:0,126,255:40,0 chr2 178482529 . T . PASS END=178482529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1313:0,65,255:37,0 chr2 178482530 . G . PASS END=178482559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:97:40:0,97,1568:0,97,255:40,0 chr2 178482560 . C T, 45.23 PASS DP=53;MQ=84.58;MQRankSum=-0.454;ReadPosRankSum=-0.774;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,26,0:0.491,0.000:53:13,14,0:14,12,0:44:80,0,47,930,937,1867:255,0,255:23,0:4.5232e+01,1.7215e-04,5.0150e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,19,14,12:8,19,16,10 chr2 178482561 . A . PASS END=178482597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,113,1800:0,113,255:40,0 chr2 178482598 . G . PASS END=178482660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:94:44:0,94,1620:0,94,255:40,0 chr2 178482661 . T . PASS END=178482697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:37:0,90,1350:0,98,255:40,0 chr2 178482698 . A G, 46.40 PASS DP=38;MQ=114.93;MQRankSum=-5.011;ReadPosRankSum=1.020;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,22,0:0.579,0.000:38:12,14,0:4,8,0:45:81,0,46,779,473,1252:255,0,255:15,0:4.6400e+01,1.5092e-04,4.9251e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,10,9,13:6,10,11,11 chr2 178482699 . A . PASS END=178482735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1335:0,95,255:37,0 chr2 178482736 . C . PASS END=178482834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:39:0,85,1406:0,85,255:40,0 chr2 178482835 . A . PASS END=178482835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:53:39:0,53,1286:0,53,255:35,0 chr2 178482836 . A . PASS END=178482841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1348:0,101,255:36,0 chr2 178482842 . C . PASS END=178482842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1227:0,64,255:35,0 chr2 178482843 . A . PASS END=178482927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1215:0,80,255:38,0 chr2 178482928 . C . PASS END=178482934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 178482935 . G . PASS END=178482939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:27,0 chr2 178482940 . G . PASS END=178482953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr2 178482954 . T . PASS END=178482954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,776:0,23,255:20,0 chr2 178482955 . T . PASS END=178482956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 178482957 . A . PASS END=178482957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:21,0 chr2 178482958 . C . PASS END=178482961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 178482962 . G . PASS END=178482962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 178482963 . C . PASS END=178482978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,837:0,63,255:22,0 chr2 178482979 . C . PASS END=178482979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 178482980 . G . PASS END=178482980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 178482981 . C . PASS END=178482981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:21,0 chr2 178482982 . C . PASS END=178482984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 178482985 . C . PASS END=178482985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 178482986 . A . PASS END=178482990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,787:0,66,255:23,0 chr2 178482991 . C . PASS END=178482991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 178482992 . T . PASS END=178483001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,817:0,69,255:23,0 chr2 178483002 . T . PASS END=178483006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 178483007 . A . PASS END=178483016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:20,0 chr2 178483017 . T . PASS END=178483019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:20:0,46,684:0,46,255:18,0 chr2 178483020 . T . PASS END=178483020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,680:0,33,255:16,0 chr2 178483021 . C . PASS END=178483030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,50,255:18,0 chr2 178483031 . C . PASS END=178483033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 178483034 . G . PASS END=178483035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr2 178483036 . A . PASS END=178483040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 178483041 . G . PASS END=178483041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr2 178483042 . G . PASS END=178483046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr2 178483047 . T . PASS END=178483047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,657:0,27,255:18,0 chr2 178483048 . C . PASS END=178483052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 178483053 . T . PASS END=178483080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,621:0,49,255:19,0 chr2 178483081 . G . PASS END=178483081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 178483082 . G . PASS END=178483093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 178483094 . G . PASS END=178483099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:23,0 chr2 178483100 . G . PASS END=178483100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 178483101 . G . PASS END=178483117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 178483118 . A . PASS END=178483118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:19,0 chr2 178483119 . A . PASS END=178483121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 178483122 . A . PASS END=178483122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 178483123 . A . PASS END=178483152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 178483153 . A . PASS END=178483157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:16,0 chr2 178483158 . T . PASS END=178483159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 178483160 . G . PASS END=178483163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr2 178483164 . A . PASS END=178483164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 178483165 . G . PASS END=178483175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 178483176 . T . PASS END=178483193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:11,0 chr2 178483194 . T . PASS END=178483195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 178483196 . C . PASS END=178483196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr2 178483197 . A . PASS END=178483203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 178483204 . G . PASS END=178483206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 178483207 . G . PASS END=178483207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 178483208 . C . PASS END=178483216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 178483217 . C . PASS END=178483228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 178483229 . G . PASS END=178483229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 178483230 . C . PASS END=178483230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 178483231 . A . PASS END=178483231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 178483232 . C . PASS END=178483239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 178483240 . C . LowGQ END=178483240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,294:22,0,255:8,0 chr2 178483241 . C . PASS END=178483241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 178483242 . A . PASS END=178483249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 178483250 . C . PASS END=178483275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:12,0 chr2 178483276 . C . PASS END=178483276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 178483277 . T . PASS END=178483279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 178483280 . C . PASS END=178483280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 178483281 . A . PASS END=178483324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 178483325 . G . PASS END=178483367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 178483368 . A . PASS END=178483368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 178483369 . G . PASS END=178483369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr2 178483370 . C . PASS END=178483378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 178483379 . T . PASS END=178483379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 178483380 . A . PASS END=178483411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 178483412 . G . PASS END=178483419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 178483420 . G . PASS END=178483429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 178494135 . T . PASS END=178494137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 178494138 . G . PASS END=178494138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 178494139 . T . PASS END=178494170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:28:0,51,765:0,54,255:19,0 chr2 178494171 . A . PASS END=178494171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1064:0,33,255:17,1 chr2 178494172 . G . PASS END=178494172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:38:0,60,900:0,114,255:20,0 chr2 178494173 . G GGGA, 50.00 PASS DP=38;MQ=248.47;MQRankSum=4.634;ReadPosRankSum=1.170;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,19,0:0.514,0.000:37:9,8,0:9,11,0:47:80,0,47,180,180,180:255,0,255:19,21:5.0000e+01,8.7237e-05,4.9956e+01,1.8477e+02,2.1477e+02,1.8778e+02:0.00,30.00,33.01,34.77,64.77,37.78:12,6,13,6:7,11,10,9 chr2 178494174 . G . LowGQ END=178494174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,14:39:0:39:0,0,380:255,0,255:34,0 chr2 178494175 . G . PASS END=178494179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:35,0 chr2 178494180 . T . PASS END=178494180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1343:0,51,255:35,0 chr2 178494181 . G . PASS END=178494182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:40:0,87,1468:0,87,255:37,1 chr2 178494183 . G . PASS END=178494183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:46:41:0,46,1382:0,46,255:38,0 chr2 178494184 . G . PASS END=178494204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,107,1512:0,107,255:40,0 chr2 178494205 . T . PASS END=178494205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:64:44:0,64,1076:0,64,255:38,0 chr2 178494206 . T . PASS END=178494218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:81:44:0,81,1137:0,81,255:40,0 chr2 178494219 . T . PASS END=178494219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:40:45:0,40,1303:0,40,255:40,0 chr2 178494220 . T . PASS END=178494224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:42:0,81,1286:0,81,255:40,0 chr2 178494225 . C . PASS END=178494225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 178494226 . T . PASS END=178494226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1183:0,59,255:35,0 chr2 178494227 . T . PASS END=178494228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1384:0,93,255:38,0 chr2 178494229 . C . PASS END=178494229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1271:0,70,255:38,0 chr2 178494230 . T . PASS END=178494231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:92:42:0,92,1255:0,92,255:38,0 chr2 178494232 . C . PASS END=178494232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1302:0,60,255:36,0 chr2 178494233 . T . PASS END=178494233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 178494234 . G . PASS END=178494234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1355:0,73,255:35,0 chr2 178494235 . T . PASS END=178494237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,122,255:37,0 chr2 178494238 . G . PASS END=178494238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1282:0,73,255:35,0 chr2 178494239 . T . PASS END=178494245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1315:0,100,255:38,0 chr2 178494246 . T . PASS END=178494246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1225:0,67,255:35,0 chr2 178494247 . G . PASS END=178494250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:39:0,83,1032:0,83,255:37,0 chr2 178494251 . C . PASS END=178494251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:37:40:0,37,1169:0,37,255:33,0 chr2 178494252 . T . PASS END=178494275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1229:0,81,255:37,0 chr2 178494276 . G . PASS END=178494276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:27,0 chr2 178494277 . A . PASS END=178494277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 178494278 . C . PASS END=178494278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 178494279 . C . PASS END=178494279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 178494280 . T . PASS END=178494280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1045:0,30,255:24,0 chr2 178494281 . T . PASS END=178494285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,82,255:27,0 chr2 178494286 . A . PASS END=178494287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:28:0,48,892:0,48,255:27,0 chr2 178494288 . T . PASS END=178494290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 178528594 . C . PASS END=178528665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,120,1800:0,126,255:40,0 chr2 178528666 . A . PASS END=178528677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,160,255:40,0 chr2 178534221 . T . PASS END=178534286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,155,255:40,0 chr2 178534287 . T . PASS END=178534295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:61:0,120,1800:0,182,255:40,0 chr2 178540183 . C . PASS END=178540246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,162,255:40,0 chr2 178540359 . A . PASS END=178540388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,148,255:40,0 chr2 178545554 . C . PASS END=178545617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:50:0,117,1755:0,126,255:40,0 chr2 178545618 . A . PASS END=178545631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,114,1710:0,137,255:40,0 chr2 178562060 . T . PASS END=178562160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:51:0,120,1800:0,129,255:40,0 chr2 178565849 . C . PASS END=178565852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 178565853 . C . PASS END=178565939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,100,1665:0,100,255:40,0 chr2 178576496 . C . PASS END=178576496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 178576497 . T . PASS END=178576497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:29,0 chr2 178576498 . T . PASS END=178576606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:30:0,83,1216:0,83,255:40,0 chr2 178592386 . G . PASS END=178592493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:63:0,120,1800:0,184,255:40,0 chr2 178592495 . T . PASS END=178592495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 178592754 . C . PASS END=178592762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1149:0,82,255:33,0 chr2 178592763 . A . PASS END=178592763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:29,0 chr2 178592764 . A . PASS END=178592764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 178592765 . T . PASS END=178592765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr2 178592766 . T . PASS END=178592774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:31,0 chr2 178592775 . C . PASS END=178592775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 178592776 . T . PASS END=178592776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 178592777 . G . PASS END=178592777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:31,0 chr2 178592778 . T . PASS END=178592778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 178592779 . A . PASS END=178592780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:31,0 chr2 178592781 . C . PASS END=178592790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1280:0,92,255:36,0 chr2 178592791 . T . PASS END=178592791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 178592792 . C . PASS END=178592809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1242:0,81,255:40,0 chr2 178592810 . C . PASS END=178592810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:38:44:0,38,1411:0,38,255:36,0 chr2 178592811 . A . PASS END=178592817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:44:0,99,1512:0,99,255:40,0 chr2 178592818 . A . PASS END=178592818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1589:0,75,255:39,0 chr2 178592819 . T . PASS END=178592851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:39:0,81,1233:0,81,255:40,0 chr2 178592852 . A . PASS END=178592852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1299:0,78,255:34,0 chr2 178592853 . A . PASS END=178592879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1202:0,81,255:34,0 chr2 178592880 . C . PASS END=178592880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 178592881 . A . PASS END=178592900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1149:0,82,255:31,0 chr2 178634051 . C . PASS END=178634101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,1:106:99:81:0,120,1800:0,188,255:40,0 chr2 178681556 . A . PASS END=178681571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:57:0,120,1800:0,144,255:40,0 chr2 178681572 . T . PASS END=178681648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:52:0,120,1800:0,140,255:40,0 chr2 178682585 . C . PASS END=178682602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,154,255:40,0 chr2 178682603 . T C, 250.73 PASS DP=68;MQ=248.93;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,31,0:0,37,0:201:289,204,0,389,389,389:255,207,0:0,0:2.5073e+02,2.0073e+02,0.0000e+00,3.8550e+02,4.2027e+02,3.8851e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,34,34:0,0,29,39 chr2 178682604 . G . PASS END=178682652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,164,255:40,0 chr2 178684947 . C . PASS END=178684958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,168,255:40,0 chr2 178684959 . G . PASS END=178685022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:75:0,120,1800:0,203,255:40,0 chr2 178704978 . C . PASS END=178705090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:33:0,83,1160:0,83,255:40,0 chr2 178705091 . T . PASS END=178705091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1144:0,74,255:32,0 chr2 178705092 . C . PASS END=178705100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1197:0,88,255:33,0 chr2 178705101 . T . PASS END=178705101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr2 178705102 . T . PASS END=178705110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1101:0,82,255:30,0 chr2 178740586 . C . PASS END=178740650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,120,1800:0,133,255:40,0 chr2 178762785 . T . PASS END=178762925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:91:33:0,91,1395:0,91,255:40,0 chr2 178764294 . C . PASS END=178764294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 178764295 . T . PASS END=178764295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1256:0,72,255:32,0 chr2 178764296 . A . PASS END=178764317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1395:0,111,255:35,0 chr2 178769825 . T . PASS END=178769914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,105,1361:0,105,255:40,0 chr2 178769916 . T . PASS END=178769916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,114,1710:0,135,255:38,0 chr2 178879029 . T . PASS END=178879033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 178879034 . C . PASS END=178879035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1119:0,72,255:33,0 chr2 178879036 . T . PASS END=178879038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:35:0,91,1258:0,91,255:34,0 chr2 178879039 . T . PASS END=178879039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1325:0,75,255:35,0 chr2 178879040 . C . PASS END=178879187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:37:0,90,1341:0,90,255:40,0 chr2 178936253 . C . PASS END=178936335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:39:0,90,1404:0,90,255:40,0 chr2 178936336 . C . PASS END=178936360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,85,255:39,0 chr2 178936361 . A . PASS END=178936372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:30:0,69,1035:0,73,255:26,0 chr2 178936373 . T G, 140.29 PASS DP=31;MQ=248.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:90:178,93,0,1172,93,1172:255,93,0:0,0:1.4029e+02,9.0291e+01,0.0000e+00,4.5000e+02,1.2506e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,10:0,0,15,16 chr2 178936374 . G . PASS END=178936394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,74,255:25,0 chr2 178936395 . A . PASS END=178936395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr2 178936396 . A . PASS END=178936410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,870:0,72,255:24,0 chr2 178936411 . T . PASS END=178936411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,876:0,47,255:23,0 chr2 178936412 . C . PASS END=178936422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,840:0,61,255:26,0 chr2 178936423 . C . PASS END=178936426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 178936427 . T . PASS END=178936427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 178936428 . G . PASS END=178936481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:31:0,87,1186:0,93,255:38,0 chr2 178936482 . A . PASS END=178936482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:32,0 chr2 178936483 . A . PASS END=178936576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:91:36:0,91,1485:0,91,255:40,0 chr2 178936577 . C . PASS END=178936613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,96,255:39,0 chr2 178936614 . C T, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,12,0:0,18,0:87:175,90,0,1155,90,1155:255,90,0:0,0:1.3729e+02,8.7289e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,17:0,0,21,9 chr2 178936615 . G . PASS END=178936624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 178936625 . C . PASS END=178936638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,74,255:26,0 chr2 178936639 . G . PASS END=178936641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 178936642 . G . PASS END=178936651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,71,255:26,0 chr2 178936652 . A . PASS END=178936682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr2 178936683 . G . PASS END=178936683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 178936684 . C . PASS END=178936686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,947:0,65,255:26,0 chr2 178936687 . T . PASS END=178936692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:30,0 chr2 178936693 . G . PASS END=178936693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 178936694 . A . PASS END=178936695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr2 178936696 . G . PASS END=178936698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 178936699 . C . PASS END=178936699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 178936700 . C . PASS END=178936700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 178936701 . C . PASS END=178936701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 178936702 . T . PASS END=178936711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,79,255:25,0 chr2 178936712 . A . PASS END=178936712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:23,0 chr2 178936713 . C . PASS END=178936715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1039:0,74,255:26,0 chr2 178936716 . C . PASS END=178936716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 178936717 . T . PASS END=178936717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 178936718 . C . PASS END=178936726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 178936727 . C . PASS END=178936733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr2 178936734 . C . PASS END=178936734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,881:0,34,255:23,0 chr2 178936735 . G . PASS END=178936760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,885:0,64,255:26,0 chr2 178936761 . C . PASS END=178936763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 178936764 . T . PASS END=178936764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,816:0,64,255:26,0 chr2 178936765 . T . PASS END=178936766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 178936767 . A . PASS END=178936767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 178936768 . C . PASS END=178936768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 178936769 . G . PASS END=178936770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr2 178936771 . G . PASS END=178936773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 178936774 . T . PASS END=178936775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 178936776 . G . PASS END=178936778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 178936779 . T . PASS END=178936793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,939:0,64,255:26,0 chr2 178936794 . C . PASS END=178936796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 178936797 . T . PASS END=178936821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,812:0,62,255:26,0 chr2 178936822 . T . PASS END=178936822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr2 178936823 . C . PASS END=178936827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr2 178936828 . G . PASS END=178936835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 178936836 . C . PASS END=178936836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:25,0 chr2 178936837 . C . PASS END=178936840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1039:0,71,255:26,0 chr2 178936841 . G . PASS END=178936841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr2 178936842 . C . PASS END=178936853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:26,0 chr2 178936854 . C . PASS END=178936863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:23:0,54,810:0,69,255:19,0 chr2 178936864 . T . PASS END=178936864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:15,0 chr2 178936865 . G . PASS END=178936876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,751:0,47,255:19,0 chr2 178936877 . A . PASS END=178936895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:22,0 chr2 178936896 . C . PASS END=178936896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:19,0 chr2 178936897 . C . PASS END=178936910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 178936911 . T . PASS END=178936911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 178936912 . G . PASS END=178936913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 178936914 . C . PASS END=178936914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr2 178936915 . T . PASS END=178936926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 178936927 . C . PASS END=178936927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 178936928 . A . PASS END=178936931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,831:0,69,255:23,0 chr2 178936932 . G . PASS END=178936932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 178936933 . G . PASS END=178936933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 178936934 . T . PASS END=178936934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 178936935 . C . PASS END=178936945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,878:0,69,255:24,0 chr2 178936946 . A . PASS END=178936946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 178936947 . C . PASS END=178936973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,789:0,72,255:26,0 chr2 178936974 . C . PASS END=178936989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr2 178936990 . T . PASS END=178936990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 178936991 . G . PASS END=178937004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1157:0,90,255:31,0 chr2 178937005 . A . PASS END=178937005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr2 178937006 . G . PASS END=178937021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1174:0,88,255:33,0 chr2 178937022 . G . PASS END=178937028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:32:0,72,1080:0,96,255:25,0 chr2 178937029 . G . PASS END=178937035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:32:0,84,1260:0,89,255:29,0 chr2 178937036 . A . PASS END=178937036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:27,0 chr2 178937037 . C . PASS END=178937037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 178937038 . T . PASS END=178937038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 178937039 . G . PASS END=178937050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 178937051 . C . PASS END=178937071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,72,255:24,0 chr2 178937072 . C . PASS END=178937072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:22,0 chr2 178937073 . T . PASS END=178937079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 178937080 . T . PASS END=178937080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 178937081 . C . PASS END=178937082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 178937083 . G . PASS END=178937083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:22,0 chr2 178937084 . C . PASS END=178937084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 178937085 . A . PASS END=178937086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr2 178937087 . C . PASS END=178937087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr2 178937088 . A . PASS END=178937088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 178937089 . A . PASS END=178937089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 178937090 . G . PASS END=178937091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,726:0,33,255:23,0 chr2 178937092 . A . PASS END=178937092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 178937093 . A . PASS END=178937093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 178937094 . T . PASS END=178937094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 178937095 . C . PASS END=178937097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 178937098 . C . PASS END=178937098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 178937099 . A . PASS END=178937100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,824:0,72,255:24,0 chr2 178937101 . A . PASS END=178937101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 178937102 . C . PASS END=178937102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 178937103 . A . PASS END=178937104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:25:0,42,861:0,42,255:25,0 chr2 178937105 . C . PASS END=178937110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178937111 . G . PASS END=178937111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 178937112 . T . PASS END=178937114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 178937115 . C . PASS END=178937127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,976:0,68,255:26,0 chr2 178937128 . T . PASS END=178937128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 178937129 . T . PASS END=178937129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 178937130 . T . PASS END=178937130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 178937131 . C . PASS END=178937135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 178937136 . T . PASS END=178937136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 178937137 . C . PASS END=178937138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 178937139 . C . PASS END=178937139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 178937140 . C . PASS END=178937143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 178937144 . G . PASS END=178937144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 178937145 . T . PASS END=178937147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 178937148 . A . PASS END=178937148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 178937149 . G . PASS END=178937149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 178937150 . G . PASS END=178937150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 178937151 . C . PASS END=178937162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 178937163 . A . PASS END=178937164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,713:0,47,255:19,0 chr2 178969029 . C . PASS END=178969150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:35:0,93,1361:0,105,255:40,0 chr2 178969151 . G . PASS END=178969151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:30,0 chr2 178969152 . C . PASS END=178969178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:32,0 chr2 178969179 . C . PASS END=178969188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 178969189 . A . PASS END=178969189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,84,255:16,0 chr2 178969190 . T . PASS END=178969190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,84,255:16,0 chr2 178977274 . A . PASS END=178977287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 178977288 . C . PASS END=178977288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 178977289 . A . PASS END=178977291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,651:0,48,255:17,0 chr2 178977292 . T . PASS END=178977292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 178977293 . C . PASS END=178977302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 178977303 . C . PASS END=178977303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 178977304 . G . PASS END=178977322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:19,0 chr2 178977323 . T . PASS END=178977324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 178977325 . G . PASS END=178977325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 178977326 . A . PASS END=178977326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 178977327 . C . PASS END=178977332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:19,0 chr2 178977333 . G . PASS END=178977342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 178977343 . C . PASS END=178977344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 178977345 . C . PASS END=178977346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 178977347 . A . PASS END=178977347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,800:0,38,255:21,0 chr2 178977348 . C . PASS END=178977372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,800:0,66,255:22,0 chr2 178977373 . A . PASS END=178977374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 178977375 . G . PASS END=178977378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:24,0 chr2 178977379 . A . PASS END=178977379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 178977380 . C . PASS END=178977407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 178977408 . C . PASS END=178977408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 178977409 . T . PASS END=178977429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:24,0 chr2 178977430 . G . PASS END=178977430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 178977431 . A . PASS END=178977456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 178977457 . A . PASS END=178977457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 178977458 . C . PASS END=178977460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 178977461 . A . PASS END=178977464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 178977465 . G . PASS END=178977468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 178977469 . A . PASS END=178977518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:19,0 chr2 178977519 . C . PASS END=178977522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:17:0,33,495:0,35,255:13,0 chr2 178977523 . G . PASS END=178977523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 178977524 . A . PASS END=178977524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 178977525 . G . PASS END=178977531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:16,0 chr2 178977532 . C . PASS END=178977532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr2 178977533 . A . PASS END=178977535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 178977536 . G . PASS END=178977536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 178977537 . C . PASS END=178977562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:16,0 chr2 178977563 . A . PASS END=178977567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 178977568 . A . PASS END=178977568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 178977569 . T . PASS END=178977573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 178977574 . G . PASS END=178977575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:14,0 chr2 178977576 . G . PASS END=178977576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 178977577 . C . PASS END=178977580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 178977581 . T . PASS END=178977605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,482:0,39,255:13,0 chr2 178977606 . G . PASS END=178977606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 178977607 . A . PASS END=178977613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 178977614 . G . PASS END=178977614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 178977615 . G . PASS END=178977626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 178977627 . C . PASS END=178977627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 178977628 . T . PASS END=178977636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 178977637 . C . PASS END=178977641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 178977642 . G . PASS END=178977642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 178977643 . C . PASS END=178977644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 178977645 . C . PASS END=178977645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 178977646 . T . PASS END=178977681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 178977682 . G . PASS END=178977720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,582:0,45,255:19,0 chr2 178977721 . G . PASS END=178977721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 178977722 . C . PASS END=178977722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr2 178977723 . T . PASS END=178977725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 178977726 . G . PASS END=178977728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 178977729 . G . PASS END=178977729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:18,0 chr2 178977730 . A . PASS END=178977744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,714:0,57,255:19,0 chr2 178977745 . A . PASS END=178977745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:16,0 chr2 178977746 . C . PASS END=178977751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:17,0 chr2 178977752 . T . PASS END=178977752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 178977753 . G . PASS END=178977762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,584:0,51,255:19,0 chr2 178977763 . G . PASS END=178977775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 178977776 . C . PASS END=178977777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 178977778 . G . PASS END=178977787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr2 178977788 . T . PASS END=178977791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,83,255:28,0 chr2 178977792 . T . PASS END=178977809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:26,0 chr2 178977810 . C . PASS END=178977810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:23,0 chr2 178977811 . C . PASS END=178977816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 178977817 . C . PASS END=178977827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 178977828 . G . PASS END=178977828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr2 178977829 . G . PASS END=178977905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1205:0,86,255:40,0 chr2 178977906 . A . PASS END=178977906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1446:0,77,255:40,0 chr2 178977907 . C . PASS END=178977999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:36:0,81,1266:0,81,255:40,0 chr2 178978000 . C . PASS END=178978001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:35:0,60,900:0,105,255:22,0 chr2 178978002 . G . PASS END=178978002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:57:34:0,57,855:0,102,255:19,0 chr2 178980989 . G . PASS END=178981111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:82:33:0,82,1109:0,82,255:40,0 chr2 178982782 . G . PASS END=178982908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:53:0,120,1800:0,138,255:40,0 chr2 178985014 . G . PASS END=178985136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,160,255:40,0 chr2 178985901 . T . PASS END=178986083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:48:0,120,1800:0,128,255:40,0 chr2 178986084 . A . PASS END=178986086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,108,1620:0,127,255:39,0 chr2 178988249 . G . PASS END=178988378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,155,255:40,0 chr2 178988555 . T . PASS END=178988639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,101,1665:0,101,255:40,0 chr2 178988854 . C . PASS END=178989017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:97:37:0,97,1279:0,97,255:40,1 chr2 178990452 . A . PASS END=178990478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:89:0,120,1800:0,234,255:40,0 chr2 178990711 . T . PASS END=178990895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,120,1800:0,127,255:40,1 chr2 178990896 . C . PASS END=178990903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:53:0,93,1395:0,146,255:40,0 chr2 179170912 . A . PASS END=179171013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:49:0,117,1755:0,134,255:40,0 chr2 179185091 . A . PASS END=179185129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:65:0,120,1800:0,183,255:40,0 chr2 179187018 . C . PASS END=179187093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,143,255:40,0 chr2 179188904 . A . PASS END=179188996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,107,1800:0,107,255:40,0 chr2 179192983 . G . PASS END=179193105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,110,1755:0,110,255:40,0 chr2 179196279 . C . PASS END=179196332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,154,255:40,0 chr2 179197368 . A . PASS END=179197371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 179197372 . A . PASS END=179197372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 179197373 . G . PASS END=179197481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:92:32:0,92,1180:0,92,255:40,0 chr2 179197598 . G . PASS END=179197766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:37:0,88,1442:0,88,255:40,0 chr2 179197767 . A . PASS END=179197768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:69:40:0,69,1035:0,120,255:25,0 chr2 179201028 . A . PASS END=179201131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:31:0,80,1095:0,80,255:40,0 chr2 179201132 . C . PASS END=179201160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:26,0 chr2 179203718 . A . PASS END=179203759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,172,255:40,0 chr2 179203760 . T . PASS END=179203796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:83:0,120,1800:0,208,255:40,0 chr2 179203797 . G A, 293.79 PASS DP=82;MQ=249.73;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,82,0:1.000,0.000:82:0,45,0:0,37,0:244:332,247,0,3165,247,3165:255,247,0:0,0:2.9379e+02,2.4379e+02,0.0000e+00,4.5000e+02,2.7856e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,55:0,0,48,34 chr2 179203798 . G . PASS END=179203821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,185,255:40,0 chr2 179204399 . G . PASS END=179204491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:75:0,120,1800:0,195,255:40,0 chr2 179209013 . G . PASS END=179209018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 179209019 . C . PASS END=179209019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 179209020 . C . PASS END=179209026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr2 179209027 . G . PASS END=179209028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 179209029 . A . PASS END=179209055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,909:0,65,255:26,0 chr2 179209056 . G . PASS END=179209056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 179209057 . G . PASS END=179209076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 179209077 . T . PASS END=179209087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 179213951 . G . PASS END=179214116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:37:0,111,1426:0,111,255:40,0 chr2 179226409 . T . PASS END=179226409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 179226410 . G . PASS END=179226410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 179226411 . C . PASS END=179226415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 179226416 . T . PASS END=179226416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,959:0,65,255:26,0 chr2 179226417 . C . PASS END=179226417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr2 179226418 . T . PASS END=179226418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr2 179226419 . T . PASS END=179226419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1060:0,93,255:31,0 chr2 179226420 . T . PASS END=179226420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 179226421 . T . PASS END=179226542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:31:0,93,1141:0,93,255:40,0 chr2 179236853 . G . PASS END=179236868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:61:0,120,1800:0,179,255:40,0 chr2 179236869 . C . PASS END=179236960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:55:0,118,1800:0,118,255:40,0 chr2 179238617 . G . PASS END=179238752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:36:0,87,1305:0,100,255:40,0 chr2 179238753 . A . PASS END=179238753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:27,0 chr2 179238754 . G . PASS END=179238754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 179247147 . G . PASS END=179247317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:80:38:0,80,1388:0,80,255:40,0 chr2 179247318 . C . PASS END=179247318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1390:0,79,255:31,0 chr2 179247319 . C . PASS END=179247319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:41:0,96,1440:0,123,255:32,0 chr2 179247320 . A . PASS END=179247320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1236:0,73,255:29,0 chr2 179247321 . C . PASS END=179247322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1260:0,90,255:31,0 chr2 179247323 . C . PASS END=179247324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1329:0,74,255:26,0 chr2 179247325 . A . PASS END=179247325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,6:39:17:39:0,17,1091:0,17,255:24,0 chr2 179247326 . C . PASS END=179247329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:38:0,81,1215:0,97,255:29,0 chr2 179247330 . C . PASS END=179247330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 179247331 . A . LowGQ END=179247331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,6:35:0:35:0,0,815:17,0,255:21,0 chr2 179247332 . C . PASS END=179247335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:31:0,63,945:0,77,255:25,0 chr2 179247336 . T . LowGQ END=179247336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,9:30:0:30:0,0,583:95,0,255:17,0 chr2 179247337 . G . PASS END=179247338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr2 179247339 . T . LowGQ END=179247339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,7:29:0:29:0,0,640:65,0,255:19,0 chr2 179247340 . A . PASS END=179247340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,797:0,50,255:19,0 chr2 179247341 . A . LowGQ END=179247341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,652:11,0,255:19,0 chr2 179247751 . T . PASS END=179247950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1133:0,80,255:40,0 chr2 179247951 . T . PASS END=179247951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:26,0 chr2 179247952 . A . PASS END=179247961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:29,0 chr2 179247962 . C . PASS END=179247962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 179247963 . C . PASS END=179247970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 179247971 . G . PASS END=179247996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1000:0,68,255:26,0 chr2 179247997 . A . PASS END=179247997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:23,0 chr2 179247998 . G . PASS END=179248004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr2 179248766 . G . PASS END=179248903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,108,1493:0,108,255:40,0 chr2 179250185 . G . PASS END=179250248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:71:0,120,1800:0,148,255:40,0 chr2 179251788 . A . PASS END=179251866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:56:0,120,1800:0,150,255:40,0 chr2 179253736 . G . PASS END=179253880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,120,1800:0,132,255:40,0 chr2 179255800 . G . PASS END=179255802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 179255803 . A . PASS END=179255822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,529:0,45,255:19,0 chr2 179255823 . G . PASS END=179255825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 179255826 . T . PASS END=179255826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 179255827 . G . PASS END=179255831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:25,0 chr2 179255832 . C . PASS END=179255833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1062:0,87,255:29,0 chr2 179255834 . A . PASS END=179255834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 179255835 . G . PASS END=179255861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:29:0,86,1057:0,86,255:40,0 chr2 179255862 . G . PASS END=179255862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1435:0,68,255:40,0 chr2 179255863 . G . PASS END=179255926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:35:0,87,1305:0,98,255:40,0 chr2 179255927 . A . PASS END=179255927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1038:0,77,255:28,0 chr2 179255928 . G . PASS END=179255940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 179255941 . C . PASS END=179255944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:26,0 chr2 179257139 . G . PASS END=179257140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 179257141 . T . PASS END=179257141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 179257142 . C . PASS END=179257147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 179257148 . C . PASS END=179257148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 179257149 . A . PASS END=179257250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:89:31:0,89,1081:0,89,255:40,0 chr2 179257251 . C . PASS END=179257251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:31,0 chr2 179257252 . C . PASS END=179257265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1263:0,86,255:34,0 chr2 179259040 . A . PASS END=179259162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:35:0,84,1203:0,84,255:40,0 chr2 179260178 . A . PASS END=179260286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:39:0,108,1620:0,117,255:40,0 chr2 179296169 . A . PASS END=179296169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:98:0,120,1800:0,255,255:40,0 chr2 179296248 . C . PASS END=179296248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 179296271 . T . PASS END=179296271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 179296511 . C . PASS END=179296511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179296559 . T . PASS END=179296559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179296644 . G . PASS END=179296644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1139:0,80,255:28,0 chr2 179296666 . T . PASS END=179296666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 179296673 . T . PASS END=179296673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1219:0,88,255:34,0 chr2 179296745 . C . PASS END=179296745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179296824 . T . PASS END=179296982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:38:0,93,1305:0,100,255:40,0 chr2 179300857 . A . PASS END=179300857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,755:0,58,255:23,0 chr2 179300866 . T . PASS END=179300866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179300872 . C . PASS END=179301046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:88:37:0,88,1296:0,88,255:40,0 chr2 179306337 . T . PASS END=179306431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:77:0,120,1800:0,194,255:40,0 chr2 179307994 . C . PASS END=179307994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 179307995 . A . PASS END=179308000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 179308001 . C . PASS END=179308003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 179308004 . A . PASS END=179308004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179308005 . A . PASS END=179308016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,927:0,70,255:26,0 chr2 179308017 . C . PASS END=179308111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1109:0,80,255:39,0 chr2 179308117 . A . PASS END=179308117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179309149 . C . PASS END=179309227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,100,1313:0,100,255:40,0 chr2 179310262 . T . PASS END=179310262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179312183 . C . PASS END=179312313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:97:44:0,97,1659:0,97,255:40,0 chr2 179314969 . C . PASS END=179315139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:42:0,111,1499:0,112,255:40,0 chr2 179315140 . T . PASS END=179315140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1406:0,79,255:37,0 chr2 179315141 . G . PASS END=179315155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,108,1527:0,113,255:38,0 chr2 179315156 . A . PASS END=179315156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:72:41:0,72,1080:0,72,255:34,0 chr2 179315157 . G . PASS END=179315170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:35:0,80,1195:0,80,255:37,0 chr2 179315693 . C . PASS END=179315757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,120,1800:0,137,255:40,0 chr2 179315768 . G . PASS END=179315768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 179315771 . G . PASS END=179315771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 179315821 . G . PASS END=179315822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1485:0,120,255:34,0 chr2 179315861 . C . PASS END=179315861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 179315874 . G . PASS END=179315874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 179315881 . G . PASS END=179315882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 179315890 . G . PASS END=179315890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 179315898 . G . PASS END=179315898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 179315906 . A . PASS END=179315906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179315931 . T . PASS END=179315931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 179316216 . G . PASS END=179316216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 179316236 . C . PASS END=179316236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 179316256 . G . PASS END=179316256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 179316285 . C . PASS END=179316285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 179316287 . A . PASS END=179316287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 179316318 . C . PASS END=179316318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 179316395 . G . PASS END=179316395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179316407 . G . PASS END=179316407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179316435 . C . PASS END=179316435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179316437 . C . PASS END=179316437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179316446 . C . PASS END=179316446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 179316455 . C . PASS END=179316455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 179316470 . G . PASS END=179316470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 179316474 . T . PASS END=179316474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1311:0,105,255:35,0 chr2 179316485 . A . PASS END=179316496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1272:0,92,255:35,0 chr2 179316568 . A . PASS END=179316597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,120,1800:0,122,255:40,0 chr2 179317171 . A . PASS END=179317296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:53:0,120,1800:0,159,255:40,0 chr2 179318137 . A . PASS END=179318347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,959:0,80,255:40,0 chr2 179319047 . C . PASS END=179319047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr2 179319059 . G . PASS END=179319254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,102,1530:0,103,255:40,0 chr2 179320737 . A . PASS END=179320741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,968:0,68,255:29,0 chr2 179320742 . T . PASS END=179320742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 179320743 . T . PASS END=179320743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr2 179320744 . A . PASS END=179320744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 179320745 . A . PASS END=179320745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 179320746 . C . PASS END=179320756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1086:0,83,255:34,0 chr2 179320757 . G . PASS END=179320757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:35,0 chr2 179320758 . C . PASS END=179320764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:37:0,97,1293:0,97,255:39,0 chr2 179320765 . C . PASS END=179320765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1297:0,78,255:38,0 chr2 179320766 . G . PASS END=179320871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1158:0,80,255:40,0 chr2 179320872 . A . PASS END=179320872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 179320873 . A . PASS END=179320873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179320874 . T . PASS END=179320874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 179320875 . G . PASS END=179320877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 179320878 . G . PASS END=179320878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179323237 . T . PASS END=179323354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:56:0,120,1800:0,152,255:40,0 chr2 179323920 . G . PASS END=179323923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,993:0,84,255:28,0 chr2 179323924 . T . PASS END=179323924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 179323925 . T . PASS END=179323927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 179325075 . A . PASS END=179325173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:46:0,107,1669:0,107,255:40,0 chr2 179325181 . T . PASS END=179325181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr2 179325709 . A . PASS END=179325716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,773:0,61,255:26,0 chr2 179325717 . G . PASS END=179325721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:29,0 chr2 179325722 . G . PASS END=179325722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 179325723 . G . PASS END=179326001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:30:0,81,1133:0,81,255:40,0 chr2 179326003 . A . PASS END=179326003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 179330497 . C . PASS END=179330497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1116:0,52,255:31,0 chr2 179330498 . T . PASS END=179330514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:82:33:0,82,1105:0,82,255:40,0 chr2 179330515 . G . PASS END=179330658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:49:0,117,1755:0,130,255:40,0 chr2 179334379 . C . PASS END=179334380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 179334381 . C . PASS END=179334512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:27:0,81,1039:0,81,255:40,0 chr2 179337859 . T . PASS END=179337869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,200,255:40,0 chr2 179341789 . C . PASS END=179341802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1141:0,82,255:33,0 chr2 179341803 . C . PASS END=179341803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:32,0 chr2 179341804 . C . PASS END=179341935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1197:0,81,255:40,0 chr2 179341936 . T . PASS END=179341937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,96,255:25,0 chr2 179341938 . C . PASS END=179341940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 179343006 . C . PASS END=179343014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 179343015 . A . PASS END=179343015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,760:0,38,255:22,0 chr2 179343016 . A . PASS END=179343025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179343026 . G . PASS END=179343031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1202:0,84,255:32,0 chr2 179343032 . A . PASS END=179343032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr2 179343033 . G . PASS END=179343135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1156:0,81,255:37,0 chr2 179343136 . T . PASS END=179343136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:30,0 chr2 179343137 . C . PASS END=179343163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1132:0,83,255:33,0 chr2 179343164 . A . PASS END=179343181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:26,0 chr2 179343182 . A . PASS END=179343182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:23,0 chr2 179343183 . A . PASS END=179343188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,83,255:26,0 chr2 179343189 . A . PASS END=179343192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179343193 . T . PASS END=179343193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 179343194 . G . PASS END=179343201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 179343202 . A . PASS END=179343202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:26,0 chr2 179343203 . T . PASS END=179343214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179343215 . G . PASS END=179343215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 179343216 . G . PASS END=179343218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,923:0,48,255:29,1 chr2 179343219 . T . PASS END=179343219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1024:0,87,255:29,0 chr2 179343220 . T . PASS END=179343220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 179343221 . T . PASS END=179343233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1064:0,87,255:31,0 chr2 179343234 . A . PASS END=179343239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:75:32:0,75,1125:0,82,255:26,0 chr2 179343240 . A . PASS END=179343241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 179343242 . A . PASS END=179343242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:26,0 chr2 179343243 . C . PASS END=179343246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:29,0 chr2 179343247 . T . PASS END=179343247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:28,0 chr2 179343248 . C . PASS END=179343251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179343252 . C . PASS END=179343252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 179343253 . T . PASS END=179343255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179343256 . C . PASS END=179343256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 179343257 . G . PASS END=179343259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179343260 . T . PASS END=179343262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr2 179343263 . C . PASS END=179343265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179343266 . T . PASS END=179343266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 179343267 . C . PASS END=179343268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179343269 . C . PASS END=179343274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:26,0 chr2 179343275 . G . PASS END=179343275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1022:0,35,255:25,0 chr2 179343276 . T . PASS END=179343282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1047:0,71,255:26,0 chr2 179343283 . C . PASS END=179343288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 179343289 . G . PASS END=179343289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 179343290 . C . PASS END=179343299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 179343300 . A . PASS END=179343308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 179343309 . A . PASS END=179343323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:24,0 chr2 179343324 . T . PASS END=179343328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,720:0,47,255:17,0 chr2 179343329 . A . PASS END=179343331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 179343332 . G . PASS END=179343333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:14,0 chr2 179343334 . C . PASS END=179343339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:19:0,33,495:0,57,255:13,0 chr2 179343340 . C . LowGQ END=179343340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,310:85,0,255:11,0 chr2 179343341 . G . PASS END=179343344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:11,0 chr2 179343345 . C . LowGQ END=179343345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,340:77,0,255:11,0 chr2 179343346 . C . PASS END=179343346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:11,0 chr2 179343347 . A . LowGQ END=179343347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,338:21,0,255:11,0 chr2 179343348 . T . PASS END=179343348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,404:0,12,255:11,0 chr2 179343349 . A . LowGQ END=179343349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,385:5,0,255:11,0 chr2 179343350 . G . PASS END=179343350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,393:0,28,255:11,0 chr2 179343351 . A . LowGQ END=179343351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,330:43,0,255:11,0 chr2 179343352 . T . PASS END=179343352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,404:0,12,255:11,0 chr2 179343353 . G . LowGQ END=179343354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,349:5,0,255:10,0 chr2 179343355 . G . PASS END=179343355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:10,0 chr2 179343356 . G . PASS END=179343356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 179343357 . C . LowGQ END=179343357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,4:15:0:15:0,0,338:43,0,255:10,0 chr2 179343358 . C . PASS END=179343358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:10,0 chr2 179343359 . C . PASS END=179343359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:10,0 chr2 179343360 . C . PASS END=179343360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr2 179343361 . G . LowGQ END=179343362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,371:0,0,255:10,0 chr2 179343363 . C . PASS END=179343364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:27:15:0,27,405:0,28,255:9,0 chr2 179343365 . T . LowGQ END=179343367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,4:14:0:14:0,0,194:0,0,255:10,0 chr2 179343368 . C . PASS END=179343368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,421:0,11,255:10,0 chr2 179343369 . A . LowGQ END=179343370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,310:52,0,255:10,0 chr2 179345597 . A . PASS END=179345600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,454:0,42,255:14,0 chr2 179345601 . A . PASS END=179345601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 179345602 . G . PASS END=179345609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr2 179345610 . T . PASS END=179345610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 179345611 . G . PASS END=179345615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 179345616 . A . PASS END=179345616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 179345617 . G . PASS END=179345617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 179345618 . T . PASS END=179345619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 179345620 . G . PASS END=179345620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 179345621 . A . PASS END=179345623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 179345624 . A . PASS END=179345624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr2 179345625 . A . PASS END=179345627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 179345628 . A . PASS END=179345628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:10,0 chr2 179345629 . T . PASS END=179345629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 179345630 . C . PASS END=179345636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr2 179350368 . G . PASS END=179350484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:34:0,94,1242:0,94,255:40,0 chr2 179353695 . G . PASS END=179353723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,134,255:40,0 chr2 179355386 . T . PASS END=179355393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,968:0,68,255:26,0 chr2 179355394 . G . PASS END=179355394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179355395 . C . PASS END=179355395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 179355396 . A . PASS END=179355407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1181:0,90,255:33,0 chr2 179355408 . A . PASS END=179355408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:32,0 chr2 179355409 . A . PASS END=179355505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1135:0,82,255:40,0 chr2 179355506 . C . PASS END=179355509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179355510 . T . PASS END=179355514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 179355515 . C . PASS END=179355527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:24,0 chr2 179355528 . T . PASS END=179355528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 179355529 . A . PASS END=179355541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,764:0,66,255:22,0 chr2 179358580 . A . PASS END=179358716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:37:0,87,1305:0,90,255:40,0 chr2 179360223 . A . PASS END=179360371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:98:33:0,98,1215:0,98,255:40,0 chr2 179360372 . T . PASS END=179360372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,4:57:60:57:0,60,1831:0,60,255:40,0 chr2 179360373 . T . PASS END=179360387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:45:0,111,1552:0,111,255:40,0 chr2 179363938 . A . PASS END=179363960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:71:0,120,1800:0,204,255:40,0 chr2 179363961 . T . PASS END=179363981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:76:0,120,1800:0,207,255:40,0 chr2 179365788 . G . PASS END=179365903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:34:0,88,1174:0,88,255:40,0 chr2 179367063 . A . PASS END=179367063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1007:0,63,255:30,0 chr2 179367064 . T . PASS END=179367107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:32:0,96,1194:0,96,255:40,0 chr2 179367108 . G . PASS END=179367108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:55:48:0,55,1324:0,55,255:40,0 chr2 179367109 . A . PASS END=179367157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:46:0,83,1491:0,83,255:40,0 chr2 179367158 . G . PASS END=179367158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1327:0,66,255:38,0 chr2 179367159 . A . PASS END=179367159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 179367160 . G . PASS END=179367160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:32:43:0,32,1227:0,32,255:36,0 chr2 179367161 . A . PASS END=179367162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,105,1314:0,106,255:39,0 chr2 179367163 . G . PASS END=179367163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1157:0,67,255:33,0 chr2 179367164 . A . PASS END=179367164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr2 179367165 . G . PASS END=179367165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1175:0,73,255:24,0 chr2 179367166 . G . PASS END=179367166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,6:41:24:41:0,24,1153:0,24,255:21,0 chr2 179367167 . A . PASS END=179367167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:41:0,81,1215:0,123,255:27,0 chr2 179367168 . G . PASS END=179367168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1166:0,56,255:23,0 chr2 179367169 . G . PASS END=179367169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:81:41:0,81,1215:0,89,255:25,0 chr2 179367170 . G . PASS END=179367170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1219:0,56,255:23,0 chr2 179367171 . T . PASS END=179367179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,87,255:32,0 chr2 179367180 . T . PASS END=179367180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,926:0,52,255:29,0 chr2 179367181 . T . PASS END=179367186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1052:0,82,255:32,0 chr2 179367187 . T . PASS END=179367187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,991:0,79,255:31,0 chr2 179367188 . G . PASS END=179367202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1081:0,80,255:32,0 chr2 179367203 . T . PASS END=179367204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:33:0,66,1064:0,66,255:29,0 chr2 179367205 . A . PASS END=179367205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:29,0 chr2 179368487 . G . PASS END=179368614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:53:0,120,1800:0,120,255:40,0 chr2 179390724 . T . PASS END=179390724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 179390771 . A . PASS END=179390771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 179390820 . C . PASS END=179390820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,172,255:40,0 chr2 179390826 . G . PASS END=179390826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 179390841 . T . PASS END=179390841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 179391103 . A . PASS END=179391103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1116:0,102,255:34,0 chr2 179391106 . G . PASS END=179391106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1288:0,92,255:35,0 chr2 179391116 . C . PASS END=179391116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 179391152 . A . PASS END=179391152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr2 179391235 . C . PASS END=179391235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 179391459 . T . PASS END=179391459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179391465 . C . PASS END=179391465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179391542 . G . PASS END=179391542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1588:0,102,255:39,0 chr2 179391556 . T . PASS END=179391556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 179391598 . A . PASS END=179391598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 179391680 . C . PASS END=179391680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179391714 . G . PASS END=179391714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 179391733 . G . PASS END=179391733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179391739 . T . PASS END=179391947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1088:0,86,255:40,0 chr2 179391948 . C . PASS END=179391956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 179391957 . A . PASS END=179391958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179391959 . G . PASS END=179391959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 179391960 . C . PASS END=179391961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179391962 . C . PASS END=179391965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1070:0,74,255:26,0 chr2 179391966 . C . PASS END=179391966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179391967 . T . PASS END=179392008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,878:0,61,255:24,0 chr2 179392009 . A . PASS END=179392009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:22,0 chr2 179392010 . A . PASS END=179392034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr2 179392173 . C . PASS END=179392392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:36:0,90,1321:0,95,255:40,0 chr2 179392393 . T . PASS END=179392393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1085:0,71,255:33,0 chr2 179392394 . G . PASS END=179392417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1202:0,86,255:34,0 chr2 179392418 . A . PASS END=179392425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1017:0,73,255:26,0 chr2 179392426 . G . PASS END=179392432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 179392433 . C . PASS END=179392434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1070:0,74,255:26,0 chr2 179392435 . T . PASS END=179392443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 179392444 . T . PASS END=179392465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,917:0,64,255:26,0 chr2 179392466 . T . PASS END=179392466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 179392467 . C . PASS END=179392468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 179392469 . A . PASS END=179392469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:20,0 chr2 179392470 . C . PASS END=179392470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 179392471 . T . PASS END=179392475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 179392478 . G . PASS END=179392478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 179392987 . G . PASS END=179392987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 179392996 . C . PASS END=179392996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1288:0,102,255:34,0 chr2 179393000 . C . PASS END=179393154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:34:0,99,1243:0,102,255:40,0 chr2 179393250 . C . PASS END=179393250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179393254 . C . PASS END=179393628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,108,1620:0,115,255:40,0 chr2 179393629 . T . PASS END=179393629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:65:53:0,65,1814:0,65,255:40,0 chr2 179393630 . C . PASS END=179393946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:39:0,96,1459:0,96,255:40,0 chr2 179393954 . A . PASS END=179393954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 179394681 . A . PASS END=179394681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,136,255:40,0 chr2 179394686 . C . PASS END=179394843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:93:55:0,93,1395:0,152,255:40,0 chr2 179394845 . T . PASS END=179394846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:53:0,93,1395:0,159,255:31,0 chr2 179394966 . A . PASS END=179394966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 179394968 . C . PASS END=179395535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:86:34:0,86,1209:0,86,255:40,0 chr2 179395536 . G . PASS END=179395572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:78:0,120,1800:0,204,255:40,0 chr2 179395573 . C T, 48.77 PASS DP=78;MQ=250.00;MQRankSum=7.494;ReadPosRankSum=4.252;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,34,0:0.442,0.000:77:27,13,0:16,21,0:47:84,0,50,1187,1537,2724:255,0,255:37,0:4.8768e+01,7.9471e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,22,17,17:23,20,18,16 chr2 179395574 . T . PASS END=179395610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,193,255:40,0 chr2 179395611 . G . PASS END=179396476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:35:0,90,1258:0,91,255:40,1 chr2 179396477 . A . PASS END=179396477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 179396478 . C . PASS END=179396577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:91:36:0,91,1078:0,91,255:40,0 chr2 179396578 . T . PASS END=179396578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr2 179396579 . C . PASS END=179396586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1296:0,92,255:35,0 chr2 179396587 . T . PASS END=179396588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:34,0 chr2 179396589 . A . PASS END=179396596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1247:0,89,255:35,0 chr2 179396597 . T . PASS END=179396597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:33,0 chr2 179396598 . T . PASS END=179396598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1280:0,94,255:35,0 chr2 179396599 . T . PASS END=179396599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:35,0 chr2 179396600 . C . PASS END=179396622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,91,255:36,0 chr2 179396623 . T . PASS END=179396623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1180:0,53,255:27,0 chr2 179396624 . A . PASS END=179396658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:32:0,83,1200:0,83,255:35,0 chr2 179396659 . A . PASS END=179396659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:28,0 chr2 179396660 . T . PASS END=179396663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,91,255:29,0 chr2 179396664 . T . PASS END=179396664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:25,0 chr2 179396665 . C . PASS END=179396698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1119:0,82,255:33,0 chr2 179396699 . T . PASS END=179396699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:32,0 chr2 179396700 . C . PASS END=179396792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:34:0,93,1388:0,101,255:39,0 chr2 179396793 . A . PASS END=179396793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1324:0,68,255:35,0 chr2 179396794 . A . PASS END=179397320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:33:0,86,1169:0,86,255:40,0 chr2 179397321 . T . PASS END=179397321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1496:0,71,255:39,0 chr2 179397322 . T . PASS END=179397583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:40:0,84,1328:0,84,255:40,0 chr2 179397584 . T . PASS END=179397584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1466:0,66,255:40,0 chr2 179397585 . C . PASS END=179397744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:42:0,80,1310:0,80,255:40,0 chr2 179397745 . C . PASS END=179397745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,6:43:15:43:0,15,1178:0,15,255:37,0 chr2 179397746 . C . PASS END=179397782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:96:42:0,96,1460:0,96,255:40,0 chr2 179397783 . T . PASS END=179397783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1273:0,79,255:36,0 chr2 179397784 . T . PASS END=179397807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:38:0,84,1333:0,84,255:39,0 chr2 179397808 . G . PASS END=179397808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1304:0,67,255:32,0 chr2 179397809 . T . PASS END=179397823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:83:33:0,83,1172:0,83,255:34,0 chr2 179397824 . A . PASS END=179397824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:28,0 chr2 179397825 . G . PASS END=179397827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1125:0,80,255:29,0 chr2 179397828 . T . PASS END=179397828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1025:0,54,255:26,0 chr2 179397829 . C . PASS END=179397829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:25,0 chr2 179397830 . T . PASS END=179397833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:28,0 chr2 179397834 . A . PASS END=179397839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,66,255:21,0 chr2 179397840 . T . PASS END=179397840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:28:0,57,855:0,67,255:19,0 chr2 179397841 . C . PASS END=179397842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:20,0 chr2 179397843 . T . PASS END=179397844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,911:0,54,255:20,0 chr2 179397845 . A . PASS END=179397848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:23,0 chr2 179397849 . A . PASS END=179397849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1039:0,46,255:26,0 chr2 179397850 . C . PASS END=179397850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179397851 . C . PASS END=179397852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 179397853 . G . PASS END=179397855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179397856 . T . PASS END=179397858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr2 179397859 . G . PASS END=179397871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:28,0 chr2 179397872 . A . PASS END=179397872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:25,0 chr2 179397873 . G . PASS END=179397886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 179397887 . T . PASS END=179397887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 179397888 . T . PASS END=179397919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1072:0,87,255:30,0 chr2 179397920 . T . PASS END=179397920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 179397921 . T . PASS END=179397925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr2 179397926 . G . PASS END=179397926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr2 179397927 . T . PASS END=179397927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:27,0 chr2 179397928 . G . PASS END=179397928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179397929 . T . PASS END=179397929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 179397930 . C . PASS END=179397948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1213:0,86,255:32,0 chr2 179397949 . T . PASS END=179397949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1094:0,47,255:30,0 chr2 179397950 . C . PASS END=179399387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1105:0,80,255:40,0 chr2 179399388 . T . PASS END=179399388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1441:0,68,255:36,0 chr2 179399389 . C . PASS END=179399884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:41:0,99,1458:0,99,255:40,0 chr2 179399885 . A . PASS END=179399885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:54:55:0,54,1650:0,54,255:40,0 chr2 179399886 . T . PASS END=179400538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:42:0,90,1500:0,90,255:40,0 chr2 179400539 . G . PASS END=179400564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:41:0,87,1305:0,88,255:40,0 chr2 179400565 . T . PASS END=179400565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1277:0,70,255:27,0 chr2 179400566 . C . PASS END=179400566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:42:0,87,1305:0,126,255:29,0 chr2 179400567 . T . PASS END=179400576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:36:0,66,990:0,94,255:24,0 chr2 179400578 . T . PASS END=179400578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,93,255:21,0 chr2 179400585 . GA G,GAA, 0.01 DRAGENIndelHardQUAL DP=28;MQ=250.00;MQRankSum=4.048;ReadPosRankSum=-0.425;FractionInformativeReads=0.893;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:16,5,4,0:0.200,0.160,0.000:25:7,3,1,0:9,2,3,0:26:0,18,68,29,74,79,35,90,103,107:255,0,255:17,11:1.1716e-02,2.6003e+01,7.9003e+01,3.7357e+01,8.9661e+01,9.0357e+01,6.9477e+01,1.3327e+02,1.4538e+02,1.4497e+02:0.00,8.00,11.00,8.00,16.00,11.00,34.77,42.77,42.77,37.77:5,11,5,4:6,10,6,3 chr2 179400709 . C . PASS END=179400712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179400713 . C . PASS END=179400714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179400715 . C . PASS END=179400717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179400718 . C . PASS END=179400718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179400719 . C . PASS END=179400721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179400722 . G . PASS END=179400722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:26,0 chr2 179400723 . G . PASS END=179400726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 179400727 . C . PASS END=179400727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 179400728 . A . PASS END=179400737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1180:0,83,255:36,0 chr2 179400738 . A . PASS END=179400738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1230:0,72,255:35,0 chr2 179400739 . C . PASS END=179401267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:35:0,83,1260:0,83,255:40,0 chr2 179401268 . A . PASS END=179401272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 179401273 . T . PASS END=179401276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:27,0 chr2 179401277 . T . PASS END=179401278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,986:0,70,255:26,0 chr2 179401279 . G . PASS END=179401280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,820:0,80,255:27,0 chr2 179401281 . T . PASS END=179401301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:26,0 chr2 179401302 . T . PASS END=179401302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr2 179401305 . A . PASS END=179401305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 179401311 . C . PASS END=179401311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 179401665 . C . PASS END=179401682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,701:0,63,255:26,0 chr2 179401683 . T . PASS END=179401865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:30:0,84,1163:0,86,255:40,0 chr2 179401866 . T . PASS END=179401866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:33,0 chr2 179401867 . G . PASS END=179401971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1125:0,80,255:38,0 chr2 179402066 . T . PASS END=179402066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 179402069 . C . PASS END=179402644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:35:0,87,1159:0,91,255:40,0 chr2 179402650 . C . PASS END=179402650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 179403267 . A . PASS END=179403277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1235:0,99,255:36,0 chr2 179403278 . G . PASS END=179403278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:35,0 chr2 179403279 . T . PASS END=179403555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:33:0,81,1215:0,83,255:40,0 chr2 179403556 . G . PASS END=179403565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:27:0,73,1025:0,73,255:26,0 chr2 179403566 . T . PASS END=179403566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179403661 . T . PASS END=179403661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179403672 . C . PASS END=179403689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,1154:0,83,255:31,0 chr2 179403690 . A . PASS END=179403690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1034:0,65,255:30,0 chr2 179403691 . C . PASS END=179403943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:30:0,81,1215:0,85,255:40,0 chr2 179403944 . T . PASS END=179403945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr2 179403946 . C . PASS END=179403955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1055:0,83,255:28,0 chr2 179403956 . A . PASS END=179403956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 179403957 . T . PASS END=179403978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,955:0,84,255:29,0 chr2 179403988 . T . PASS END=179403988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179404102 . C . PASS END=179404102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179404109 . T . PASS END=179404116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:32,0 chr2 179404117 . G . PASS END=179404117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1202:0,50,255:31,2 chr2 179404118 . T . PASS END=179404118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:38:36:0,38,1038:0,38,255:32,2 chr2 179404119 . T . PASS END=179404119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:33,0 chr2 179404120 . T . PASS END=179404128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:34:0,88,1219:0,88,255:33,0 chr2 179404129 . A . PASS END=179404129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:32,0 chr2 179404130 . C . PASS END=179404692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1264:0,81,255:40,0 chr2 179404693 . T . PASS END=179404693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1242:0,59,255:31,0 chr2 179404696 . G . PASS END=179404696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 179404792 . C . PASS END=179404792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr2 179404795 . C . PASS END=179405070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:34:0,100,1253:0,100,255:40,0 chr2 179405071 . T . PASS END=179405071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:32,0 chr2 179405072 . T . PASS END=179405083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1215:0,90,255:34,0 chr2 179405084 . C . PASS END=179405087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:78:34:0,78,1170:0,89,255:26,0 chr2 179405088 . C . PASS END=179405089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179405090 . T . PASS END=179405090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 179405091 . G . PASS END=179405097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179406009 . C . PASS END=179406014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,811:0,72,255:26,0 chr2 179406015 . G . PASS END=179406022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,918:0,81,255:28,0 chr2 179406023 . G . PASS END=179406023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 179406024 . C . PASS END=179406055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:28:0,84,995:0,84,255:39,0 chr2 179406056 . C . PASS END=179406056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:38,0 chr2 179406057 . C . PASS END=179406202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:81:36:0,81,1081:0,81,255:40,0 chr2 179406203 . T . PASS END=179406203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1249:0,67,255:34,0 chr2 179406204 . A . PASS END=179406209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:37,0 chr2 179406210 . T . PASS END=179406210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:32,0 chr2 179406211 . C . PASS END=179406274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:30:0,87,1305:0,90,255:36,0 chr2 179406275 . T . PASS END=179406275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 179406276 . C . PASS END=179406280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr2 179406281 . A . PASS END=179406281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 179406282 . T . PASS END=179406287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179406288 . A . PASS END=179406307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,937:0,62,255:26,0 chr2 179406308 . A . PASS END=179406309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:56:24:0,56,845:0,56,255:19,0 chr2 179406310 . A . PASS END=179406311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 179406316 . A . PASS END=179406316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179406742 . A . PASS END=179406742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 179406984 . G . PASS END=179406984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179406990 . C . PASS END=179406992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,856:0,72,255:26,0 chr2 179406993 . A G, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.308;ReadPosRankSum=1.282;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,13,0:0.500,0.000:26:6,7,0:7,6,0:48:85,0,50,465,465,930:255,0,255:13,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,4,11,2:6,7,7,6 chr2 179406994 . T . PASS END=179406995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,937:0,62,255:26,0 chr2 179406996 . C . PASS END=179406996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 179406997 . T . PASS END=179406997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 179406998 . G . PASS END=179406998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 179406999 . C . PASS END=179406999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr2 179407000 . T . PASS END=179407000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 179407001 . G . PASS END=179407001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr2 179407002 . C . PASS END=179407030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,90,255:37,0 chr2 179407031 . A . PASS END=179407137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:37:0,87,1337:0,87,255:40,0 chr2 179407138 . G . PASS END=179407138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:62:41:0,62,1428:0,62,255:35,0 chr2 179407139 . C . PASS END=179407281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1119:0,82,255:40,0 chr2 179407282 . C . PASS END=179407290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:30:0,63,945:0,85,255:23,0 chr2 179407383 . C . PASS END=179407383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 179407385 . T . PASS END=179407385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 179407389 . C . PASS END=179407659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:33:0,84,1305:0,84,255:40,0 chr2 179407660 . A . PASS END=179407660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1040:0,66,255:29,0 chr2 179407661 . T . PASS END=179407676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1149:0,82,255:35,0 chr2 179407788 . G . PASS END=179407788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,117,1755:0,125,255:39,0 chr2 179407792 . A . PASS END=179407792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 179407795 . C . PASS END=179407809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:45:0,102,1551:0,102,255:40,0 chr2 179407810 . A . PASS END=179408161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,99,1549:0,99,255:40,0 chr2 179408162 . G . PASS END=179408198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,164,255:40,0 chr2 179408199 . A G, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.646;ReadPosRankSum=5.374;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,30,0:0.500,0.000:60:12,12,0:18,18,0:48:85,0,50,1065,1036,2101:255,0,255:30,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,14,16,14:18,12,16,14 chr2 179408200 . G . PASS END=179408236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:56:0,120,1800:0,152,255:40,0 chr2 179408237 . C . PASS END=179408380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1260:0,84,255:40,0 chr2 179408381 . C . PASS END=179408389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:30:0,75,1125:0,90,255:26,0 chr2 179408557 . T . PASS END=179408557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1443:0,104,255:38,0 chr2 179408559 . A . PASS END=179408559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 179408561 . C . PASS END=179408842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1255:0,81,255:40,0 chr2 179408928 . C . PASS END=179408936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,102,1473:0,104,255:36,0 chr2 179408937 . C . PASS END=179408940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1313:0,75,255:34,0 chr2 179408941 . G . PASS END=179409226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,84,255:40,0 chr2 179409227 . G . PASS END=179409230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:39:0,75,1125:0,117,255:26,0 chr2 179409231 . T . PASS END=179409231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:23,0 chr2 179409232 . A . PASS END=179409232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:22,0 chr2 179409233 . T . PASS END=179409233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1048:0,54,255:23,0 chr2 179410115 . A . PASS END=179410122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:31,0 chr2 179410123 . T . PASS END=179410123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1128:0,78,255:32,0 chr2 179410124 . C . PASS END=179410420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:34:0,90,1258:0,92,255:40,0 chr2 179410544 . T . PASS END=179410544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 179410547 . T . PASS END=179410806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:39:0,81,1215:0,101,255:40,0 chr2 179410807 . C . PASS END=179410808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:33:0,78,1170:0,99,255:26,0 chr2 179410809 . G . PASS END=179410809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 179410810 . C . PASS END=179410843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:26:0,65,969:0,65,255:26,0 chr2 179410939 . C . PASS END=179410951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:36,0 chr2 179410952 . C . PASS END=179410952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1332:0,59,255:34,0 chr2 179410953 . A . PASS END=179410953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr2 179410954 . T . PASS END=179411229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:94:38:0,94,1348:0,94,255:40,0 chr2 179411327 . C . PASS END=179411327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 179411328 . G . PASS END=179411328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 179411329 . T . PASS END=179411330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr2 179411331 . T . PASS END=179411335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:29,0 chr2 179411336 . C . PASS END=179411343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr2 179411344 . G . PASS END=179411349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 179411350 . G . PASS END=179411350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179411351 . G . PASS END=179411356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 179411357 . T . PASS END=179411359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179411360 . A . PASS END=179411365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179411366 . A . PASS END=179411366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 179411367 . C . PASS END=179411375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 179411376 . A . PASS END=179411376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 179411377 . A . PASS END=179411405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:30:0,83,1094:0,83,255:32,0 chr2 179411406 . A . PASS END=179411406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 179411407 . C . PASS END=179411431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1217:0,86,255:35,0 chr2 179411432 . T . PASS END=179411432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:33,0 chr2 179411433 . G . PASS END=179411451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1233:0,89,255:33,0 chr2 179411452 . A . PASS END=179411452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1063:0,72,255:31,0 chr2 179411453 . A . PASS END=179411461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:34:0,92,1288:0,92,255:34,0 chr2 179411462 . A . PASS END=179411462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1155:0,58,255:29,0 chr2 179411463 . T . PASS END=179411537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1183:0,89,255:35,0 chr2 179411538 . C . PASS END=179411538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:30,0 chr2 179411539 . A . PASS END=179411550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:32,0 chr2 179411551 . C . PASS END=179411551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179411552 . C . PASS END=179411552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179411553 . T . PASS END=179411555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 179411556 . A . PASS END=179411574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1088:0,83,255:30,0 chr2 179411575 . C . PASS END=179411575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 179411576 . A . PASS END=179411590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1172:0,83,255:30,0 chr2 179411591 . T . PASS END=179411591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1111:0,68,255:28,0 chr2 179411592 . T . PASS END=179411603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1040:0,87,255:29,0 chr2 179411604 . A . PASS END=179411604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 179411605 . T . PASS END=179411605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179411606 . C . PASS END=179411632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,71,255:26,0 chr2 179411725 . C . PASS END=179411725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 179411730 . C . PASS END=179411994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:33:0,85,1142:0,85,255:40,0 chr2 179411995 . A . PASS END=179411995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1335:0,65,255:30,0 chr2 179411996 . T . PASS END=179412000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1260:0,101,255:30,0 chr2 179412001 . G . PASS END=179412002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 179412003 . C . PASS END=179412004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1260:0,111,255:28,0 chr2 179412005 . T . PASS END=179412005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:28,0 chr2 179412006 . C . PASS END=179412017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,83,255:31,0 chr2 179412018 . G . PASS END=179412033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr2 179412134 . C . PASS END=179412236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,99,1320:0,100,255:40,0 chr2 179412237 . A . PASS END=179412237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1302:0,70,255:36,0 chr2 179412238 . T . PASS END=179412414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:36:0,93,1293:0,97,255:40,0 chr2 179412415 . G . PASS END=179412415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:32,0 chr2 179412416 . T . PASS END=179412456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1260:0,90,255:34,0 chr2 179412457 . A . PASS END=179412457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 179412458 . A . PASS END=179412471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:29,0 chr2 179412472 . G . PASS END=179412492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,1080:0,75,255:25,0 chr2 179412493 . A . PASS END=179412493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,813:0,48,255:23,0 chr2 179412494 . A . PASS END=179412500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,970:0,67,255:26,0 chr2 179412501 . T . PASS END=179412502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179412503 . C . PASS END=179412503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 179412504 . A . PASS END=179412504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179412505 . G . PASS END=179412508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1055:0,74,255:26,0 chr2 179412509 . C . PASS END=179413383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1148:0,81,255:40,0 chr2 179413384 . T . PASS END=179413384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1319:0,70,255:35,0 chr2 179413385 . C . PASS END=179413419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:82:39:0,82,1368:0,82,255:40,0 chr2 179413420 . A . PASS END=179413420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1307:0,78,255:37,0 chr2 179413421 . A . PASS END=179413636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:37:0,81,1302:0,81,255:40,0 chr2 179413637 . C . PASS END=179413637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:35,0 chr2 179413638 . G . PASS END=179413680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1311:0,90,255:39,0 chr2 179413681 . T . PASS END=179413681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:59:36:0,59,1206:0,59,255:30,0 chr2 179413682 . C . PASS END=179414167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:84:35:0,84,1271:0,84,255:40,0 chr2 179414168 . T . PASS END=179414170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 179414171 . G . PASS END=179414178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 179414179 . A . PASS END=179414200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 179414290 . A . PASS END=179414290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 179414297 . T . PASS END=179414596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:33:0,84,1251:0,91,255:40,1 chr2 179414604 . A . PASS END=179414604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 179414713 . C . PASS END=179414727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 179414728 . T . PASS END=179414728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:27,0 chr2 179414729 . A . PASS END=179414731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1048:0,87,255:29,0 chr2 179414732 . T . PASS END=179414732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 179414733 . T . PASS END=179414738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 179414739 . T . PASS END=179414739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,875:0,70,255:28,0 chr2 179414740 . T . PASS END=179414965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:29:0,81,1103:0,81,255:40,0 chr2 179414966 . A . PASS END=179414966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr2 179414967 . A . PASS END=179414990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1215:0,99,255:37,0 chr2 179414991 . A . PASS END=179414997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 179414998 . G . PASS END=179414998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:25,0 chr2 179414999 . A . PASS END=179415001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 179415689 . C . PASS END=179415689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 179415694 . C . PASS END=179415719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:26,0 chr2 179415720 . C . PASS END=179415723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:29,0 chr2 179415724 . A . PASS END=179415724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 179415725 . A . PASS END=179415747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:30:0,87,1271:0,89,255:40,0 chr2 179415748 . T . PASS END=179415748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:39,0 chr2 179415749 . T . PASS END=179415963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:83:37:0,83,1137:0,83,255:40,0 chr2 179415964 . T . PASS END=179415972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:66:35:0,66,990:0,66,255:26,0 chr2 179415973 . G . PASS END=179415982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:26:0,57,855:0,78,255:19,0 chr2 179415983 . T . PASS END=179415988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr2 179416353 . T . PASS END=179416353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1241:0,99,255:33,0 chr2 179416357 . C . PASS END=179416928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:88:35:0,88,1161:0,88,255:40,0 chr2 179416929 . C . PASS END=179416929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1189:0,66,255:33,0 chr2 179416930 . G . PASS END=179416939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1286:0,92,255:34,0 chr2 179416940 . T . PASS END=179416940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1173:0,74,255:32,0 chr2 179416941 . T . PASS END=179417956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1202:0,81,255:40,0 chr2 179417957 . G . PASS END=179417989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,166,255:40,0 chr2 179417990 . A . LowGQ END=179417990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,12:61:0:61:0,0,1293:39,0,255:40,0 chr2 179417991 . T . PASS END=179418023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,127,255:40,0 chr2 179418024 . G . PASS END=179418123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:86:43:0,86,1538:0,86,255:40,0 chr2 179418228 . C . PASS END=179418534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,104,1355:0,104,255:40,0 chr2 179418636 . C . PASS END=179418636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 179418638 . T . PASS END=179418887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:99:43:0,111,1537:0,113,255:40,0 chr2 179418888 . C . PASS END=179418888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1512:0,74,255:40,0 chr2 179418889 . A . PASS END=179418944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,86,255:40,0 chr2 179419180 . C . PASS END=179419181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr2 179419182 . A . PASS END=179419182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:24,0 chr2 179419183 . A . PASS END=179419189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,872:0,61,255:26,0 chr2 179419190 . C . PASS END=179419190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 179419191 . T . PASS END=179419191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,909:0,54,255:26,0 chr2 179419192 . T . PASS END=179419192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 179419193 . G . PASS END=179419234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1208:0,80,255:37,0 chr2 179419235 . T . PASS END=179419235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1201:0,78,255:34,0 chr2 179419236 . T . PASS END=179419265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:97:36:0,97,1200:0,97,255:38,0 chr2 179419266 . T . PASS END=179419266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:36,0 chr2 179419267 . C . PASS END=179419328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:81:38:0,81,1280:0,81,255:40,0 chr2 179419329 . G . PASS END=179419365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1380:0,111,255:38,0 chr2 179419366 . T C, 45.62 PASS DP=39;MQ=250.00;MQRankSum=5.182;ReadPosRankSum=3.103;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,15,0:0.385,0.000:39:16,7,0:8,8,0:45:80,0,50,537,822,1358:255,0,255:21,0:4.5615e+01,1.4082e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,12,6,9:14,10,8,7 chr2 179419367 . G . PASS END=179419403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1273:0,105,255:38,0 chr2 179419404 . G . PASS END=179419425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:36,0 chr2 179419426 . T . PASS END=179419426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1124:0,77,255:33,0 chr2 179419427 . C . PASS END=179419469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1158:0,92,255:35,0 chr2 179419470 . C . PASS END=179419479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 179419485 . A . PASS END=179419485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 179419488 . G . PASS END=179419488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 179419590 . A . PASS END=179419829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1215:0,83,255:40,0 chr2 179419830 . G . PASS END=179419838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,74,255:24,0 chr2 179419839 . A . PASS END=179419840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:28:0,57,855:0,68,255:19,0 chr2 179419841 . C . PASS END=179419851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,64,255:22,0 chr2 179419852 . T . PASS END=179419852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:21,0 chr2 179419853 . C . PASS END=179419853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 179419854 . T . PASS END=179419854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:21,0 chr2 179419855 . A . PASS END=179419857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 179419858 . G . PASS END=179419859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr2 179419860 . C . PASS END=179419866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 179419867 . A . PASS END=179419867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:21,0 chr2 179419868 . T . PASS END=179419870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,756:0,66,255:22,0 chr2 179419871 . C . PASS END=179419871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 179419872 . A . PASS END=179419875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 179419876 . C . PASS END=179419879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr2 179421567 . A . PASS END=179421567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr2 179421574 . C . PASS END=179421580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 179421581 . A . PASS END=179421581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,695:0,52,255:19,0 chr2 179421582 . A . PASS END=179421589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,786:0,66,255:22,0 chr2 179421590 . A . PASS END=179421590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 179421591 . A . PASS END=179421591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 179421592 . G . PASS END=179421871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:30:0,88,1050:0,88,255:40,0 chr2 179421881 . T . PASS END=179421881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 179421972 . A . PASS END=179421972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 179421975 . C . PASS END=179421975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 179421980 . C . PASS END=179421982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr2 179421983 . A . PASS END=179421983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 179421984 . A . PASS END=179421990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 179421991 . A . PASS END=179421991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:27,0 chr2 179421992 . T . PASS END=179422230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:31:0,81,1172:0,83,255:40,0 chr2 179422231 . C . PASS END=179422231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 179422232 . T . PASS END=179422272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1188:0,86,255:34,0 chr2 179422273 . C . PASS END=179422273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:29,0 chr2 179422274 . C . PASS END=179422282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1178:0,83,255:30,0 chr2 179422286 . C . PASS END=179422286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 179422375 . T . PASS END=179422607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:89:35:0,89,1197:0,89,255:40,0 chr2 179422608 . T . PASS END=179422608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:34,0 chr2 179422609 . T . PASS END=179422628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1282:0,89,255:37,0 chr2 179422629 . G . PASS END=179422629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:35,0 chr2 179422630 . T . PASS END=179422692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1161:0,80,255:37,0 chr2 179422693 . T . PASS END=179422693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 179422694 . G . PASS END=179422694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179422695 . A . PASS END=179422695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:27,0 chr2 179422696 . A . PASS END=179422719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1177:0,80,255:34,0 chr2 179422720 . T . PASS END=179422720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:31,0 chr2 179422721 . G . PASS END=179422725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1241:0,86,255:32,0 chr2 179422726 . C . PASS END=179422726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:31,0 chr2 179422727 . A . PASS END=179422962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:31:0,80,1101:0,80,255:40,0 chr2 179422974 . G . PASS END=179422974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 179423068 . C . PASS END=179423339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1166:0,86,255:40,0 chr2 179423340 . A . PASS END=179423346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1108:0,77,255:26,0 chr2 179423347 . C . PASS END=179423363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr2 179423364 . T . PASS END=179423364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179423746 . C . PASS END=179423746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 179424036 . A . PASS END=179424036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 179424038 . C . PASS END=179424041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 179424042 . T . PASS END=179424042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179424043 . A . PASS END=179425132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:30:0,84,1158:0,90,255:40,0 chr2 179425133 . T . PASS END=179425133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1589:0,67,255:36,0 chr2 179425134 . C . PASS END=179425192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:37:0,90,1341:0,90,255:40,0 chr2 179425193 . A . PASS END=179425193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1380:0,76,255:36,0 chr2 179425194 . C . PASS END=179426207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:33:0,87,1195:0,87,255:40,2 chr2 179426208 . G . PASS END=179426208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1598:0,69,255:40,2 chr2 179426209 . G . PASS END=179426283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1294:0,89,255:40,0 chr2 179426284 . T . PASS END=179426284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:30,0 chr2 179426285 . C . PASS END=179426298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1189:0,89,255:35,0 chr2 179426299 . A . PASS END=179426299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1119:0,75,255:32,0 chr2 179426300 . T . PASS END=179426316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:34:0,87,1280:0,92,255:33,0 chr2 179426317 . T . PASS END=179426317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1200:0,58,255:25,0 chr2 179426318 . C . PASS END=179426322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:30,0 chr2 179426323 . A . PASS END=179426323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:29,0 chr2 179426324 . C . PASS END=179427081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:85:33:0,85,1059:0,85,255:40,0 chr2 179427082 . A . PASS END=179427118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:34:0,87,1258:0,98,255:37,0 chr2 179427119 . T C, 50.00 PASS DP=34;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=2.922;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,20,0:0.588,0.000:34:7,9,0:7,11,0:47:85,0,48,679,493,1171:255,0,255:14,0:5.0000e+01,7.9471e-05,5.0821e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,7,16,4:6,8,7,13 chr2 179427120 . G . PASS END=179427156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:34:0,99,1274:0,102,255:40,0 chr2 179427157 . T . PASS END=179428611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:36:0,80,1313:0,80,255:40,0 chr2 179428612 . G . PASS END=179428612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:39,0 chr2 179428613 . A . PASS END=179428726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:35:0,89,1186:0,89,255:40,0 chr2 179428727 . T . PASS END=179428727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:32,0 chr2 179428728 . C . PASS END=179428771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:35:0,96,1440:0,105,255:40,0 chr2 179428772 . T . PASS END=179428772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr2 179428773 . G . PASS END=179428774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 179428775 . T . PASS END=179428775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:28,0 chr2 179428776 . G . PASS END=179428795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:37:0,87,1350:0,87,255:37,0 chr2 179428796 . C . PASS END=179428796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr2 179428797 . A . PASS END=179429223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:88:39:0,88,1355:0,88,255:40,0 chr2 179429224 . A . PASS END=179429224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1396:0,79,255:36,0 chr2 179429225 . G . PASS END=179429225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,108,1620:0,129,255:36,0 chr2 179429226 . A . PASS END=179429226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1372:0,79,255:34,0 chr2 179429227 . T . PASS END=179429242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,107,1488:0,107,255:38,0 chr2 179429243 . T . PASS END=179429243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1347:0,73,255:34,0 chr2 179429244 . A . PASS END=179429298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:32:0,84,1173:0,84,255:37,0 chr2 179429299 . A . PASS END=179429299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1190:0,66,255:31,0 chr2 179429300 . C . PASS END=179429358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1177:0,80,255:33,0 chr2 179429359 . G . PASS END=179429359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr2 179429360 . C . PASS END=179429393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1231:0,86,255:36,0 chr2 179429394 . A . PASS END=179429394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr2 179429395 . A . PASS END=179429425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1145:0,92,255:37,0 chr2 179429426 . A . PASS END=179429426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1022:0,61,255:31,0 chr2 179429427 . C . PASS END=179430007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:92:41:0,92,1257:0,92,255:40,1 chr2 179430008 . T . PASS END=179430008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:62:52:0,62,1709:0,62,255:40,0 chr2 179430009 . G . PASS END=179430174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:38:0,97,1259:0,97,255:40,0 chr2 179430175 . T . PASS END=179430175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1133:0,75,255:35,0 chr2 179430176 . C . PASS END=179430215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,95,255:38,0 chr2 179430216 . A . PASS END=179430216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:61:39:0,61,1165:0,61,255:30,0 chr2 179430217 . C . PASS END=179430217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:39:0,81,1215:0,100,255:27,0 chr2 179430218 . T . PASS END=179430218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1356:0,76,255:27,0 chr2 179430219 . A . PASS END=179430221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 179430222 . C . PASS END=179430223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 179430224 . G . PASS END=179430612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:33:0,83,1172:0,83,255:40,0 chr2 179430613 . T . PASS END=179430613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:29,0 chr2 179430614 . C . PASS END=179430618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1260:0,89,255:29,0 chr2 179430619 . A . PASS END=179430619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:27,0 chr2 179430620 . G . PASS END=179432147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:32:0,82,1133:0,82,255:40,1 chr2 179432148 . A . PASS END=179432184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:44:0,99,1485:0,100,255:40,0 chr2 179432185 . A G, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.101;ReadPosRankSum=0.827;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,32,0:0.604,0.000:53:5,15,0:16,17,0:46:85,0,46,1115,651,1766:255,0,255:20,0:5.0000e+01,9.8109e-05,4.9002e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,8,14,18:11,10,11,21 chr2 179432186 . T . PASS END=179432222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,117,1755:0,122,255:40,0 chr2 179432223 . T . PASS END=179432252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:42:0,101,1521:0,101,255:40,0 chr2 179432253 . T . PASS END=179432253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1450:0,74,255:40,0 chr2 179432254 . G . PASS END=179432580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:42:0,96,1340:0,96,255:40,0 chr2 179432581 . C . PASS END=179432581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:64:50:0,64,1706:0,64,255:40,0 chr2 179432582 . C . PASS END=179433119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:38:0,89,1303:0,89,255:40,0 chr2 179433120 . G . PASS END=179433120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 179433121 . T . PASS END=179433141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,107,1451:0,107,255:40,0 chr2 179433142 . T . PASS END=179433142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1315:0,67,255:39,0 chr2 179433143 . C . PASS END=179435297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:34:0,86,1218:0,86,255:40,0 chr2 179435298 . T . PASS END=179435298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:31,0 chr2 179435299 . T . PASS END=179435320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1288:0,94,255:37,0 chr2 179435321 . C . PASS END=179435321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:33,0 chr2 179435322 . A . PASS END=179435365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:37:0,93,1277:0,93,255:40,0 chr2 179435366 . A . PASS END=179435366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1297:0,65,255:37,0 chr2 179435367 . G . PASS END=179435996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:37:0,88,1322:0,88,255:40,0 chr2 179435997 . G . PASS END=179435998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1450:0,74,255:36,0 chr2 179435999 . G . PASS END=179436316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:36:0,84,1258:0,87,255:40,0 chr2 179436317 . T . PASS END=179436317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1175:0,72,255:31,0 chr2 179436318 . C . PASS END=179436802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:80:32:0,80,1161:0,80,255:40,0 chr2 179436803 . A . PASS END=179436803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1183:0,66,255:31,0 chr2 179436804 . G . PASS END=179436814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1197:0,91,255:31,0 chr2 179436815 . C . PASS END=179436819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179436820 . A . PASS END=179436826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 179436827 . C . PASS END=179436843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:26:0,60,900:0,77,255:26,0 chr2 179436844 . G . PASS END=179436845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr2 179436846 . G . PASS END=179436851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:21,0 chr2 179436852 . G . PASS END=179436853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 179436854 . C . PASS END=179436854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 179436855 . T . PASS END=179436855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 179436856 . G . PASS END=179436937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,784:0,63,255:25,0 chr2 179436938 . C . PASS END=179436938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 179436939 . T . PASS END=179436972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,884:0,64,255:26,0 chr2 179436973 . G . PASS END=179436989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,962:0,81,255:29,0 chr2 179436990 . T . PASS END=179436990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:27,0 chr2 179436991 . A . PASS END=179437001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 179437002 . A . PASS END=179437002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 179437003 . G . PASS END=179437005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 179437006 . A . PASS END=179437006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 179437007 . G . PASS END=179437040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1172:0,80,255:33,0 chr2 179437041 . T . PASS END=179437041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr2 179437042 . T . PASS END=179437169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1147:0,83,255:38,0 chr2 179437170 . T . PASS END=179437170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1112:0,66,255:33,0 chr2 179437171 . C . PASS END=179437196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1223:0,86,255:34,0 chr2 179437197 . A . PASS END=179437197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1399:0,60,255:29,0 chr2 179437198 . T . PASS END=179437223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:32:0,82,1090:0,82,255:33,0 chr2 179437224 . A . PASS END=179437224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:31,0 chr2 179437225 . A . PASS END=179438824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:35:0,81,1258:0,81,255:40,0 chr2 179438825 . A . PASS END=179438825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:44:0,63,1482:0,63,255:35,0 chr2 179438826 . T . PASS END=179439991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:31:0,86,1123:0,86,255:40,1 chr2 179439992 . T . PASS END=179440028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,114,1710:0,131,255:40,0 chr2 179440029 . G A, 50.00 PASS DP=55;MQ=249.86;MQRankSum=5.901;ReadPosRankSum=0.109;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,28,0:0.509,0.000:55:19,11,0:8,17,0:48:85,0,50,954,890,1845:255,0,255:22,0:5.0000e+01,6.5492e-05,5.2960e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,13,13,15:14,13,16,12 chr2 179440030 . C . PASS END=179440066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:45:0,96,1598:0,96,255:40,0 chr2 179440067 . C . PASS END=179440438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:37:0,86,1347:0,86,255:40,0 chr2 179440439 . T . PASS END=179440439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1219:0,64,255:35,0 chr2 179440440 . C . PASS END=179440495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:35,0 chr2 179440496 . G . PASS END=179440498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:35:0,72,1080:0,105,255:25,0 chr2 179440499 . G . PASS END=179441083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:32:0,84,1125:0,89,255:40,0 chr2 179441084 . A . PASS END=179441084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1145:0,69,255:30,0 chr2 179441085 . A . PASS END=179441127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1163:0,80,255:32,0 chr2 179441128 . G . PASS END=179441128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 179441129 . G . PASS END=179441129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179441130 . T . PASS END=179441144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,80,255:26,0 chr2 179441148 . G . PASS END=179441148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 179441251 . C . PASS END=179441251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 179441256 . A . PASS END=179441260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179441261 . G . PASS END=179441274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1070:0,84,255:29,0 chr2 179441275 . A . PASS END=179441275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 179441276 . A . PASS END=179441418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:29:0,82,1108:0,82,255:40,1 chr2 179441419 . C . PASS END=179441419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:33,0 chr2 179441420 . A . PASS END=179441421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1310:0,92,255:33,0 chr2 179441422 . G . PASS END=179441422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr2 179441423 . C . PASS END=179441432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1178:0,86,255:34,0 chr2 179441433 . C . PASS END=179441433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr2 179441434 . T . PASS END=179441445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:34,0 chr2 179441446 . A . PASS END=179441446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 179441447 . T . PASS END=179441447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:27,0 chr2 179441448 . G . PASS END=179441465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:25:0,65,923:0,65,255:26,0 chr2 179441466 . T . PASS END=179441466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 179441467 . G . PASS END=179441481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,908:0,61,255:22,0 chr2 179441482 . T . PASS END=179441482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:20,0 chr2 179441483 . G . PASS END=179441489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 179441490 . T . PASS END=179441490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 179441491 . C . PASS END=179441492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179441493 . A . PASS END=179441494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 179441495 . C . PASS END=179441495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179441496 . T . PASS END=179441498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 179441499 . C . PASS END=179441554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:25,0 chr2 179441555 . G . PASS END=179441555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 179441556 . G . PASS END=179441558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr2 179441649 . C . PASS END=179441655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1177:0,80,255:31,0 chr2 179441656 . T . PASS END=179441656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:29,0 chr2 179441657 . G . PASS END=179441662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr2 179441663 . C . PASS END=179441663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:29,0 chr2 179441664 . A . PASS END=179441667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 179441668 . T . PASS END=179441668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 179441669 . G . PASS END=179441669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179441670 . A . PASS END=179441670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 179441671 . C . PASS END=179441672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179441673 . G . PASS END=179441673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1288:0,70,255:35,0 chr2 179441674 . G . PASS END=179441923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:39:0,85,1316:0,85,255:40,0 chr2 179441924 . A . PASS END=179441924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1554:0,72,255:40,0 chr2 179441925 . G . PASS END=179442237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:96:37:0,96,1380:0,101,255:40,0 chr2 179442324 . C . PASS END=179442324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 179442328 . C . PASS END=179442338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:39:0,87,1395:0,87,255:36,0 chr2 179442339 . C . PASS END=179442339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1256:0,59,255:36,0 chr2 179442340 . T . PASS END=179442593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:38:0,93,1336:0,93,255:40,0 chr2 179442594 . T . PASS END=179442594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:32,0 chr2 179442595 . A . PASS END=179442625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1191:0,86,255:34,0 chr2 179442633 . A . PASS END=179442633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1266:0,102,255:34,0 chr2 179442714 . C . PASS END=179442769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:29:0,80,1109:0,80,255:40,0 chr2 179442770 . T . PASS END=179442770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1659:0,72,255:40,0 chr2 179442771 . G . PASS END=179442912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,103,1584:0,103,255:40,0 chr2 179442916 . C . PASS END=179442916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 179443335 . T . PASS END=179443335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 179443338 . C . PASS END=179443443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,103,1543:0,103,255:40,0 chr2 179443530 . T . PASS END=179443530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1429:0,117,255:39,0 chr2 179443533 . C . PASS END=179444094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1205:0,89,255:40,0 chr2 179444095 . A . PASS END=179444122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr2 179444124 . T . PASS END=179444124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 179444285 . T . PASS END=179444285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr2 179444288 . C . PASS END=179444562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:81:35:0,81,1215:0,97,255:40,0 chr2 179444563 . G . PASS END=179444563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 179444564 . G . PASS END=179444567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,108,255:30,0 chr2 179444568 . A . PASS END=179444568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1138:0,74,255:29,0 chr2 179444569 . G . PASS END=179444573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1156:0,93,255:31,0 chr2 179444574 . T . PASS END=179444574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:30,0 chr2 179444575 . T . PASS END=179444575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 179444577 . T . PASS END=179444577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 179444665 . C . PASS END=179444730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,120,255:40,0 chr2 179444731 . A . PASS END=179444757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:47:0,111,1761:0,111,255:40,0 chr2 179444758 . T . PASS END=179444758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:66:48:0,66,1659:0,66,255:40,0 chr2 179444759 . C . PASS END=179444767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,114,1710:0,131,255:40,0 chr2 179444768 . C G, 194.00 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,27,0:0,22,0:144:232,147,0,1851,147,1851:255,147,0:0,0:1.9400e+02,1.4400e+02,0.0000e+00,4.5000e+02,1.7877e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,25:0,0,20,29 chr2 179444769 . T . PASS END=179444805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,111,1517:0,111,255:40,0 chr2 179444806 . G . PASS END=179444957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:42:0,102,1528:0,102,255:40,0 chr2 179445049 . C . PASS END=179445191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:94:40:0,94,1433:0,94,255:40,0 chr2 179445192 . C . PASS END=179445228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:66:0,120,1800:0,194,255:40,0 chr2 179445229 . T C, 48.78 PASS DP=66;MQ=250.00;MQRankSum=6.925;ReadPosRankSum=3.747;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,29,0:0.439,0.000:66:24,16,0:13,13,0:47:84,0,50,1029,1271,2299:255,0,255:37,0:4.8779e+01,7.9212e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,15,11,18:23,14,16,13 chr2 179445230 . C . PASS END=179445266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:52:0,120,1800:0,156,255:40,0 chr2 179445267 . C . PASS END=179445311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:32:0,81,1215:0,92,255:40,0 chr2 179445312 . G . PASS END=179445313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 179445314 . A . PASS END=179445314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 179445315 . T . PASS END=179445328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,881:0,67,255:26,0 chr2 179445329 . A . PASS END=179445336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:25:0,51,765:0,59,255:18,0 chr2 179445338 . T . PASS END=179445338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr2 179445346 . T . PASS END=179445346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 179446218 . A . PASS END=179446218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 179446222 . T . PASS END=179446222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 179446224 . A . PASS END=179446314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:35:0,102,1530:0,105,255:40,0 chr2 179446315 . T . PASS END=179446315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:59:51:0,59,1682:0,59,255:40,0 chr2 179446316 . G . PASS END=179446391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:35:0,93,1395:0,105,255:40,0 chr2 179446392 . A . PASS END=179446392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr2 179446393 . T . PASS END=179446441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1107:0,88,255:34,0 chr2 179446442 . C . PASS END=179446445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 179446446 . G . PASS END=179446458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1109:0,80,255:29,0 chr2 179446459 . T . PASS END=179446461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:24,0 chr2 179446462 . C . PASS END=179446462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 179446463 . C . PASS END=179446465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 179446466 . A . PASS END=179446469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 179446470 . T . PASS END=179446477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 179446478 . C . PASS END=179446478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr2 179446479 . A . PASS END=179446479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179446480 . G . PASS END=179446488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:30,0 chr2 179446489 . G . PASS END=179446493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179446494 . A . PASS END=179446500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:28,0 chr2 179446501 . A . PASS END=179446501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 179446502 . C . PASS END=179446509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1056:0,87,255:29,0 chr2 179446510 . A . PASS END=179446510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:27,0 chr2 179446511 . A . PASS END=179446515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179446516 . G . PASS END=179446516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:27,0 chr2 179446517 . G . PASS END=179446517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179446518 . T . PASS END=179446530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1011:0,73,255:26,0 chr2 179446531 . T . PASS END=179446531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179446533 . T . PASS END=179446533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179446633 . A . PASS END=179446794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:37:0,95,1311:0,95,255:40,0 chr2 179446795 . T . PASS END=179446795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,4:56:65:56:0,65,1800:0,65,255:40,0 chr2 179446796 . A . PASS END=179446920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:40:0,85,1440:0,85,255:40,0 chr2 179446921 . A . PASS END=179446936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:24:0,60,833:0,72,255:24,0 chr2 179447008 . G . PASS END=179447008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr2 179447021 . A . PASS END=179447039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1172:0,85,255:30,0 chr2 179447040 . A . PASS END=179447040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 179447041 . T . PASS END=179447044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:29,0 chr2 179447045 . T . PASS END=179447045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:28,0 chr2 179447046 . G . PASS END=179447053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 179447054 . G . PASS END=179447055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179447056 . A . PASS END=179447319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:32:0,81,1172:0,83,255:40,0 chr2 179447667 . C . PASS END=179447945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:28:0,84,1031:0,84,255:40,0 chr2 179447946 . T . PASS END=179447947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:29,0 chr2 179447948 . G . PASS END=179447951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1215:0,93,255:29,0 chr2 179447952 . G . PASS END=179447954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1008:0,71,255:25,0 chr2 179447956 . T . PASS END=179447956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 179448324 . A . PASS END=179448324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 179448334 . C . PASS END=179448345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1166:0,99,255:36,0 chr2 179448346 . G . PASS END=179448346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 179448347 . G . PASS END=179448591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:38:0,87,1305:0,91,255:40,0 chr2 179448592 . T . PASS END=179448595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:78:39:0,78,1170:0,107,255:26,0 chr2 179448596 . C . PASS END=179448614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1080:0,90,255:30,0 chr2 179448615 . T . PASS END=179448617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1047:0,74,255:26,0 chr2 179448618 . G . PASS END=179448618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:25,0 chr2 179448619 . G . PASS END=179448633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr2 179448641 . A . PASS END=179448641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr2 179449003 . C . PASS END=179449003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 179449004 . A . PASS END=179449010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1033:0,87,255:29,0 chr2 179449011 . A . PASS END=179449011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 179449012 . T . PASS END=179449297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:34:0,81,1190:0,86,255:40,2 chr2 179449298 . A . PASS END=179449302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 179449303 . C . PASS END=179449303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 179449304 . A . PASS END=179449304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 179449305 . C . PASS END=179449305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 179449317 . G . PASS END=179449317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 179449385 . C . PASS END=179449385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 179449395 . C . PASS END=179449397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 179449398 . A . PASS END=179449398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179449399 . A . PASS END=179449399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,707:0,52,255:19,0 chr2 179449400 . T . PASS END=179449407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 179449408 . G . PASS END=179449415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 179449416 . A . PASS END=179449416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 179449417 . T . PASS END=179449557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1213:0,89,255:40,0 chr2 179449558 . G . PASS END=179449558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:31,0 chr2 179449559 . G . PASS END=179449568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1158:0,85,255:32,0 chr2 179449569 . C . PASS END=179449573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1117:0,80,255:28,0 chr2 179449574 . C . PASS END=179449575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 179449576 . C . PASS END=179449576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 179449577 . C . PASS END=179449605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,945:0,72,255:25,0 chr2 179449606 . C T, 50.00 PASS DP=25;MQ=250.00;MQRankSum=3.889;ReadPosRankSum=2.541;FractionInformativeReads=0.960;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,16,0:0.667,0.000:24:5,8,0:3,8,0:45:85,0,44,572,257,830:255,0,191:7,0:5.0000e+01,1.3668e-04,4.6679e+01,4.5000e+02,2.9211e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,9,7:1,7,5,11 chr2 179449607 . G . PASS END=179449638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,959:0,65,255:26,0 chr2 179449639 . A . PASS END=179449639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179449640 . A . PASS END=179449643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 179449644 . T . PASS END=179449664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,811:0,72,255:25,0 chr2 179449665 . T . PASS END=179449665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 179449666 . C . PASS END=179449667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 179449668 . A . PASS END=179449668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,659:0,58,255:22,0 chr2 179449669 . A . PASS END=179449672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 179449673 . A . PASS END=179449673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,815:0,36,255:19,0 chr2 179449674 . G . PASS END=179449674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 179449675 . G . PASS END=179449678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,900:0,61,255:20,0 chr2 179449679 . A . PASS END=179449679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 179449680 . G . PASS END=179449695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,925:0,64,255:25,0 chr2 179449700 . A . PASS END=179449700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179449798 . C . PASS END=179449801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,915:0,78,255:26,0 chr2 179449802 . T . PASS END=179449803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1031:0,81,255:29,0 chr2 179449804 . A . PASS END=179449804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 179449805 . C . PASS END=179449807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179449808 . C . PASS END=179449808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 179449809 . A . PASS END=179449809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179449810 . A . PASS END=179449810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 179449811 . C . PASS END=179449812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179449813 . T . PASS END=179449813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,926:0,73,255:27,0 chr2 179449814 . T . PASS END=179449816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179449817 . T . PASS END=179449830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:26:0,72,947:0,78,255:26,0 chr2 179449831 . G . PASS END=179450075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:86:30:0,86,1107:0,86,255:40,0 chr2 179451232 . A . PASS END=179451243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1246:0,89,255:36,0 chr2 179451244 . T . PASS END=179451244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:33,0 chr2 179451245 . G . PASS END=179451295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1372:0,90,255:40,0 chr2 179451296 . T . PASS END=179451296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:49:46:0,49,1358:0,49,255:39,0 chr2 179451297 . C . PASS END=179451318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,110,1503:0,110,255:40,0 chr2 179451319 . A . PASS END=179451319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1317:0,70,255:40,0 chr2 179451320 . T . PASS END=179451511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:30:0,84,1074:0,90,255:40,0 chr2 179451512 . T . PASS END=179451534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,906:0,62,255:26,0 chr2 179451536 . T . PASS END=179451536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 179451845 . T . PASS END=179451845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 179451846 . T . PASS END=179452057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:27:0,80,1008:0,80,255:40,0 chr2 179452058 . C . PASS END=179452058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1227:0,78,255:34,0 chr2 179452059 . G . PASS END=179452063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:37,0 chr2 179452064 . T . PASS END=179452064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1107:0,77,255:31,0 chr2 179452065 . T . PASS END=179452066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:33,0 chr2 179452067 . C . PASS END=179452067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,1027:0,44,255:27,0 chr2 179452068 . A . PASS END=179452068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,110,255:31,0 chr2 179452069 . G . PASS END=179452069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1074:0,61,255:29,0 chr2 179452070 . G . PASS END=179452070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr2 179452071 . A . PASS END=179452071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1107:0,74,255:29,0 chr2 179452072 . G . PASS END=179452072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1154:0,91,255:30,0 chr2 179452073 . G . PASS END=179452074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,105,255:23,0 chr2 179452075 . G . PASS END=179452079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1260:0,114,255:29,0 chr2 179452080 . G . PASS END=179452080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1166:0,64,255:28,0 chr2 179452081 . G . PASS END=179452081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:38:0,87,1305:0,97,255:28,0 chr2 179452082 . A . PASS END=179452082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:27,0 chr2 179452083 . C . PASS END=179452083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 179452084 . A . PASS END=179452084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1023:0,38,255:29,0 chr2 179452085 . C . PASS END=179452086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 179452087 . T . PASS END=179452087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,922:0,18,255:25,0 chr2 179452088 . G . PASS END=179452089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,978:0,51,255:25,0 chr2 179452090 . C . PASS END=179452095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:25,0 chr2 179452096 . G . PASS END=179452096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,970:0,35,255:24,0 chr2 179452097 . T . PASS END=179452104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 179452105 . A . PASS END=179452106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,868:0,26,255:25,0 chr2 179452107 . A . PASS END=179452112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 179452113 . A . PASS END=179452115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 179452116 . T . PASS END=179452116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,882:0,26,255:24,0 chr2 179452117 . T . PASS END=179452123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 179452124 . C . PASS END=179452124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,890:0,48,255:23,0 chr2 179452125 . A . PASS END=179452129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr2 179452130 . C . PASS END=179452131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:57:25:0,57,855:0,61,255:19,0 chr2 179452132 . G . PASS END=179452135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:21,0 chr2 179452136 . C . PASS END=179452137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 179452138 . G . PASS END=179452141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,65,255:20,0 chr2 179452142 . T . PASS END=179452143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 179452144 . T . PASS END=179452145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 179452151 . A . PASS END=179452151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 179452159 . A . PASS END=179452159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 179452238 . C . PASS END=179452239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 179452243 . C . PASS END=179452306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:83:32:0,83,1164:0,83,255:40,2 chr2 179452307 . T . PASS END=179452307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:79:55:0,79,1876:0,79,255:40,2 chr2 179452308 . T . PASS END=179452515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,105,1575:0,116,255:40,0 chr2 179452516 . T . PASS END=179452516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:51:39:0,51,1186:0,51,255:31,0 chr2 179452517 . C . PASS END=179452527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1440:0,111,255:35,0 chr2 179452626 . C . PASS END=179452629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1305:0,93,255:29,0 chr2 179452630 . T . PASS END=179452630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1017:0,49,255:28,0 chr2 179452631 . A . PASS END=179452636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179452637 . T . PASS END=179452637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:25,0 chr2 179452638 . T . PASS END=179452639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1102:0,77,255:26,0 chr2 179452640 . G . PASS END=179452641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 179452642 . T . PASS END=179452642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:27,0 chr2 179452643 . T . PASS END=179452646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179452647 . T . PASS END=179452647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr2 179452648 . A . PASS END=179452681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1036:0,82,255:33,0 chr2 179452682 . A . PASS END=179452682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 179452683 . C . PASS END=179452688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179452689 . T . PASS END=179452689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 179452690 . T . PASS END=179452699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1071:0,87,255:31,0 chr2 179452700 . A . PASS END=179452700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:30,0 chr2 179452701 . C . PASS END=179452730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1235:0,84,255:38,0 chr2 179452731 . A . PASS END=179452731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:34,0 chr2 179452732 . G . PASS END=179452744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1380:0,98,255:37,0 chr2 179452745 . A . PASS END=179452745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1311:0,62,255:35,0 chr2 179452746 . A . PASS END=179452887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:82:37:0,82,1336:0,82,255:40,0 chr2 179452888 . A . PASS END=179452888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1561:0,78,255:40,0 chr2 179452889 . G . PASS END=179452946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:91:37:0,91,1530:0,91,255:40,0 chr2 179453260 . C . PASS END=179453260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 179453265 . C . PASS END=179453833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:35:0,92,1310:0,92,255:40,0 chr2 179453834 . A . PASS END=179453834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:33,1 chr2 179453835 . T . PASS END=179453836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,1 chr2 179453837 . T . PASS END=179456209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:36:0,80,1196:0,80,255:40,2 chr2 179456210 . T . PASS END=179456210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1415:0,76,255:39,0 chr2 179456211 . C . PASS END=179456231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:31:0,85,1119:0,85,255:40,0 chr2 179456326 . C . PASS END=179456334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 179456335 . C . PASS END=179456340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,927:0,81,255:28,0 chr2 179456341 . A . PASS END=179456341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 179456342 . T . PASS END=179456348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,948:0,84,255:28,0 chr2 179456349 . G . PASS END=179456349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179456350 . G . PASS END=179456351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179456352 . A . PASS END=179456352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 179456353 . T . PASS END=179456588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:32:0,87,1305:0,96,255:40,0 chr2 179456589 . T . PASS END=179456590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:34:0,75,1125:0,102,255:25,0 chr2 179456591 . G . PASS END=179456594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,92,255:28,0 chr2 179456595 . A . PASS END=179456612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,68,255:25,1 chr2 179456613 . G . PASS END=179456614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:52:29:0,52,998:0,52,255:27,1 chr2 179456615 . G . PASS END=179456616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179456617 . G . PASS END=179456619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 179456626 . A . PASS END=179456626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 179456629 . G . PASS END=179456629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 179456704 . C . PASS END=179456710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:30,0 chr2 179456711 . G . PASS END=179456711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 179456712 . A . PASS END=179456714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179456715 . C . PASS END=179456715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 179456716 . A . PASS END=179456718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 179456719 . G . PASS END=179456719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:28,0 chr2 179456720 . C . PASS END=179456720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179456721 . C . PASS END=179456722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr2 179456723 . T . PASS END=179456751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1132:0,80,255:32,0 chr2 179456752 . C . PASS END=179456752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 179456753 . C . PASS END=179456767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1215:0,96,255:38,0 chr2 179456768 . T . PASS END=179456768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1127:0,64,255:35,0 chr2 179456769 . C . PASS END=179456995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:34:0,80,1215:0,80,255:40,0 chr2 179456996 . C . PASS END=179457005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:64:27:0,64,858:0,64,255:26,0 chr2 179457106 . C . PASS END=179457124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:26,0 chr2 179457125 . T . PASS END=179457126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 179457127 . A . PASS END=179457130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:26,0 chr2 179457131 . A . PASS END=179457131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:25,0 chr2 179457132 . G . PASS END=179457387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:28:0,81,995:0,84,255:40,0 chr2 179457499 . C . PASS END=179457499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 179457502 . C . PASS END=179457810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:34:0,83,1209:0,83,255:40,0 chr2 179457891 . A . PASS END=179457891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 179457894 . C . PASS END=179457894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 179457900 . C . PASS END=179458202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:41:0,96,1429:0,96,255:40,0 chr2 179458288 . T . PASS END=179458289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 179458293 . A . PASS END=179458293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179458295 . T . PASS END=179458541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:43:0,105,1627:0,105,255:40,0 chr2 179458542 . A . PASS END=179458542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1490:0,55,255:38,0 chr2 179458543 . T . PASS END=179458564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1427:0,104,255:40,0 chr2 179458565 . T . PASS END=179458580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,103,255:35,0 chr2 179458581 . T . PASS END=179458594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:42:20:0,42,630:0,60,255:16,0 chr2 179458609 . A . PASS END=179458609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 179458686 . A . PASS END=179458686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 179458688 . C . PASS END=179458692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,778:0,66,255:22,0 chr2 179458693 . A . PASS END=179458693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 179458694 . C . PASS END=179458696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 179458697 . T . PASS END=179458697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr2 179458698 . A . PASS END=179458698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 179458699 . A . PASS END=179458699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 179458700 . C . PASS END=179458702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:23,0 chr2 179458703 . G . PASS END=179458703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 179458704 . A . PASS END=179458705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 179458706 . A . PASS END=179458706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:23,0 chr2 179458707 . G . PASS END=179458707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 179458708 . A . PASS END=179458708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,729:0,39,255:22,0 chr2 179458709 . A . PASS END=179458712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,840:0,72,255:25,0 chr2 179458713 . T . PASS END=179458713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 179458714 . T . PASS END=179458716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,955:0,65,255:28,0 chr2 179458717 . C . PASS END=179458718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179458719 . A . PASS END=179458719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 179458720 . G . PASS END=179458919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,1215:0,87,255:40,0 chr2 179458920 . A . PASS END=179458920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:29,0 chr2 179458921 . A . PASS END=179458947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1073:0,82,255:32,0 chr2 179458948 . T . PASS END=179458953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr2 179458954 . T . PASS END=179458969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:19:0,45,675:0,49,255:19,0 chr2 179459066 . C . PASS END=179459066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 179459071 . C . PASS END=179459366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,95,255:40,0 chr2 179459367 . G . PASS END=179459373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:29:0,69,1035:0,71,255:26,0 chr2 179460225 . T . PASS END=179460225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 179460233 . C . PASS END=179460260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:46:0,105,1550:0,105,255:40,0 chr2 179460261 . C . PASS END=179460536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:37:0,87,1305:0,110,255:40,1 chr2 179462257 . G . PASS END=179462257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 179462261 . T . PASS END=179462261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 179462264 . C . PASS END=179462292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,805:0,62,255:26,0 chr2 179462293 . T . PASS END=179462456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:28:0,80,1025:0,80,255:40,0 chr2 179462457 . C . PASS END=179462493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:56:0,120,1800:0,147,255:40,0 chr2 179462494 . A G, 50.00 PASS DP=60;MQ=249.90;MQRankSum=6.213;ReadPosRankSum=2.870;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,31,0:0.517,0.000:60:10,14,0:19,17,0:48:85,0,50,1098,1027,2125:255,0,255:27,0:5.0000e+01,6.5751e-05,5.2907e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,18,19,12:14,15,18,13 chr2 179462495 . T . PASS END=179462531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:45:0,99,1485:0,134,255:40,0 chr2 179462532 . G . PASS END=179462546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,99,1485:0,113,255:37,0 chr2 179462550 . G . PASS END=179462550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 179462552 . A . PASS END=179462552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 179462635 . C . PASS END=179462785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:50:0,111,1665:0,137,255:40,0 chr2 179462789 . G . PASS END=179462789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 179463223 . G . PASS END=179463223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179463230 . T . PASS END=179463230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179463233 . C . PASS END=179463238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:33:0,88,1158:0,88,255:33,0 chr2 179463239 . C . PASS END=179463239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1089:0,71,255:32,0 chr2 179463240 . C . PASS END=179463381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:33:0,83,1142:0,83,255:40,0 chr2 179463384 . G . PASS END=179463384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 179463475 . C . PASS END=179463710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:85:32:0,85,1142:0,85,255:40,0 chr2 179463711 . T . PASS END=179463711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1498:0,77,255:39,0 chr2 179463712 . C . PASS END=179463757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:34:0,84,1260:0,95,255:40,0 chr2 179463758 . A . PASS END=179463759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,85,255:26,0 chr2 179463760 . C . PASS END=179463761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:29,0 chr2 179463762 . G . PASS END=179463790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:25,0 chr2 179463872 . C . PASS END=179464173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1215:0,86,255:40,0 chr2 179464280 . C . PASS END=179464549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:29:0,84,1127:0,87,255:40,0 chr2 179464550 . A . PASS END=179464550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:34,0 chr2 179464551 . A . PASS END=179464562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:40:0,84,1260:0,120,255:36,0 chr2 179464563 . C . PASS END=179464563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1177:0,58,255:21,0 chr2 179464564 . A . PASS END=179464577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:28:0,66,990:0,84,255:25,0 chr2 179465581 . A . PASS END=179465584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 179465585 . C . PASS END=179465592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,984:0,65,255:26,0 chr2 179465593 . T . PASS END=179465593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,837:0,34,255:24,0 chr2 179465594 . G . PASS END=179465595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179465596 . C . PASS END=179465596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179465597 . A . PASS END=179465599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1008:0,71,255:29,0 chr2 179465600 . C . PASS END=179465600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 179465601 . A . PASS END=179465601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 179465602 . C . PASS END=179465898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:31:0,80,1129:0,80,255:40,0 chr2 179465986 . G . PASS END=179465988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 179465992 . A . PASS END=179466217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:35:0,88,1333:0,88,255:40,0 chr2 179466218 . C . PASS END=179466218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:40,0 chr2 179466219 . A . PASS END=179466291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:37:0,84,1357:0,84,255:40,0 chr2 179466295 . T . PASS END=179466295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 179466375 . T . PASS END=179466375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 179466380 . C . PASS END=179466380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 179466384 . C . PASS END=179466515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,114,1710:0,122,255:40,0 chr2 179466518 . T . PASS END=179466518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 179466524 . G . PASS END=179466524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 179466599 . A . PASS END=179466599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 179466609 . C . PASS END=179466641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,157,255:40,0 chr2 179466644 . A . PASS END=179466644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 179466649 . A . PASS END=179466649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 179466729 . C . PASS END=179466874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:86:34:0,86,1263:0,86,255:40,0 chr2 179466875 . C . PASS END=179466878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,102,255:25,0 chr2 179467009 . C . PASS END=179467300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:34:0,84,1260:0,88,255:40,0 chr2 179467301 . A . PASS END=179467301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 179467302 . G . PASS END=179467311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,89,255:29,0 chr2 179467312 . G . PASS END=179467312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:28,0 chr2 179467313 . T . PASS END=179467318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1133:0,80,255:29,0 chr2 179468588 . C . PASS END=179468588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 179468593 . G . PASS END=179468593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 179468595 . A . PASS END=179468595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 179468602 . C . PASS END=179468613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 179468614 . C . PASS END=179469032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:31:0,80,1143:0,80,255:40,0 chr2 179469296 . A . PASS END=179469296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 179469429 . G . PASS END=179469429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 179469435 . C . PASS END=179469625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:39:0,99,1378:0,99,255:40,0 chr2 179469713 . C . PASS END=179469927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:31:0,81,1215:0,90,255:40,0 chr2 179469928 . G . PASS END=179469928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 179469929 . C . PASS END=179469941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,89,255:30,0 chr2 179469942 . C . PASS END=179469965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,931:0,67,255:26,0 chr2 179469966 . C . PASS END=179469968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179469969 . T . PASS END=179469969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 179469970 . A . PASS END=179469971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 179469972 . C . PASS END=179470002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,898:0,61,255:25,0 chr2 179470003 . C . PASS END=179470007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr2 179470008 . T . PASS END=179470011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 179470012 . A . PASS END=179470012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 179470013 . G . PASS END=179470013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179470014 . T . PASS END=179470014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 179470015 . T . PASS END=179470020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 179470021 . C . PASS END=179470022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 179470135 . C . PASS END=179470138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 179470140 . C . PASS END=179470150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,837:0,66,255:24,0 chr2 179470151 . T . PASS END=179470151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 179470152 . T . PASS END=179470160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 179470161 . A . PASS END=179470161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179470162 . C . PASS END=179470163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:31:0,72,1139:0,72,255:30,0 chr2 179470164 . T . PASS END=179470260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:34:0,86,1210:0,86,255:40,0 chr2 179470261 . A . PASS END=179470285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,116,1671:0,116,255:40,0 chr2 179470286 . A . PASS END=179470286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:69:61:0,69,1689:0,69,255:40,0 chr2 179470287 . A . PASS END=179470288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,4:62:99:61:0,119,1800:0,119,255:40,0 chr2 179470289 . T . PASS END=179470289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,7:62:46:62:0,46,1459:0,46,255:40,0 chr2 179470290 . C . PASS END=179470290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:99:63:0,105,1762:0,105,255:40,0 chr2 179470291 . T . PASS END=179470291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:16:63:0,16,1686:0,16,255:40,0 chr2 179470292 . T . PASS END=179470293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,164,255:40,0 chr2 179470294 . C . PASS END=179470294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,7:60:41:60:0,41,1561:0,41,255:40,0 chr2 179470295 . A . PASS END=179470297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,163,255:40,0 chr2 179470298 . G . PASS END=179470298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,9:59:27:59:0,27,1551:0,27,255:40,0 chr2 179470299 . T . PASS END=179470323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:99:57:0,102,1485:0,102,255:40,0 chr2 179470324 . C . PASS END=179470324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,7:57:5:57:0,5,1675:0,5,255:40,0 chr2 179470325 . A . PASS END=179470335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:57:0,88,1800:0,88,255:40,0 chr2 179470336 . C . PASS END=179470437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:32:0,81,1215:0,85,255:40,0 chr2 179470438 . G . PASS END=179470441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,93,255:24,0 chr2 179470444 . T . PASS END=179470444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:30:0,66,990:0,74,255:21,0 chr2 179470446 . G . PASS END=179470446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr2 179471748 . C . PASS END=179471758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,864:0,62,255:27,0 chr2 179471759 . A . PASS END=179471760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,993:0,84,255:29,0 chr2 179471761 . T . PASS END=179471761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 179471762 . G . PASS END=179471766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 179471767 . A . PASS END=179471767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:30,0 chr2 179471768 . A . PASS END=179471801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1111:0,86,255:36,0 chr2 179471802 . A . PASS END=179471802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1271:0,78,255:35,0 chr2 179471803 . C . PASS END=179472042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:34:0,80,1252:0,80,255:40,0 chr2 179472122 . C . PASS END=179472122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 179472124 . T . PASS END=179472125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 179472127 . C . PASS END=179472412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:86:39:0,86,1308:0,86,255:40,0 chr2 179472508 . G . PASS END=179472508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 179472512 . C . PASS END=179472512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179472513 . T . PASS END=179472513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 179472514 . T . PASS END=179472515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179472516 . T . PASS END=179472516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:29,0 chr2 179472517 . G . PASS END=179472519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179472520 . T . PASS END=179472520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:29,0 chr2 179472521 . C . PASS END=179472543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1049:0,80,255:31,0 chr2 179472544 . T . PASS END=179472544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,909:0,57,255:28,0 chr2 179472545 . C . PASS END=179472545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 179472546 . T . PASS END=179472546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 179472547 . C . PASS END=179472551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1103:0,90,255:31,0 chr2 179472552 . C . PASS END=179472553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 179472554 . G . PASS END=179472581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:33,0 chr2 179472582 . C . PASS END=179472583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179472584 . C . PASS END=179472588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179472589 . A . PASS END=179472589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:26,0 chr2 179472590 . G . PASS END=179472590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179472591 . T . PASS END=179472592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179472593 . T . PASS END=179472615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1149:0,80,255:31,0 chr2 179472616 . T . PASS END=179472616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:30,0 chr2 179472617 . C . PASS END=179472797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:31:0,81,1013:0,89,255:40,0 chr2 179472798 . C . PASS END=179472809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,74,255:25,0 chr2 179472905 . A . PASS END=179472934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,861:0,65,255:26,0 chr2 179472935 . A . PASS END=179472936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 179472937 . G . PASS END=179472944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179472945 . G . PASS END=179472945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179472946 . A . PASS END=179472949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 179472950 . T . PASS END=179472977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1080:0,87,255:32,0 chr2 179472978 . T . PASS END=179472978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:30,0 chr2 179472979 . A . PASS END=179472982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:33,0 chr2 179472983 . T . PASS END=179472983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr2 179472984 . G . PASS END=179473193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,102,255:40,0 chr2 179473194 . A . PASS END=179473204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:29:0,72,1080:0,87,255:25,0 chr2 179473206 . T . PASS END=179473206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 179473210 . A . PASS END=179473210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 179473333 . C . PASS END=179473335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 179473336 . A . PASS END=179473336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 179473337 . T . PASS END=179473337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179473338 . G . PASS END=179473338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 179473339 . G . PASS END=179473339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179473340 . A . PASS END=179473340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 179473341 . T . PASS END=179473341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179473342 . C . PASS END=179473342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179473343 . T . PASS END=179473348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 179473349 . C . PASS END=179473349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 179473350 . A . PASS END=179473358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:30,0 chr2 179473359 . T . PASS END=179473360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 179473361 . T . PASS END=179473361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179473362 . G . PASS END=179473362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 179473363 . A . PASS END=179473369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 179473370 . T . PASS END=179473370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1333:0,75,255:34,0 chr2 179473371 . G . PASS END=179473628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:38:0,84,1333:0,84,255:40,0 chr2 179473629 . G . PASS END=179473629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1568:0,61,255:37,0 chr2 179473630 . G . PASS END=179473635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:42:0,105,1575:0,113,255:38,0 chr2 179473930 . C . PASS END=179473930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 179473935 . C . PASS END=179474283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1260:0,85,255:40,0 chr2 179474284 . G . PASS END=179474284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:28,0 chr2 179474285 . A . PASS END=179474290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 179474291 . G . PASS END=179474294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1035:0,77,255:27,0 chr2 179474295 . C . PASS END=179474297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr2 179474301 . T . PASS END=179474301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:39:0,90,1350:0,117,255:30,0 chr2 179474410 . C . PASS END=179474410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 179474411 . C . PASS END=179474411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:32,0 chr2 179474412 . A . PASS END=179474416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr2 179474417 . G . PASS END=179474417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:36,0 chr2 179474418 . A . PASS END=179474431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1358:0,90,255:40,0 chr2 179474432 . T . PASS END=179474432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1283:0,79,255:39,0 chr2 179474433 . T . PASS END=179474435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,111,1574:0,113,255:39,0 chr2 179474436 . A . PASS END=179474436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:46:44:0,46,1421:0,46,255:38,0 chr2 179474437 . G . PASS END=179474714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:93:36:0,93,1440:0,93,255:40,0 chr2 179474722 . C . PASS END=179474722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 179474812 . C . PASS END=179474812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 179474816 . C . PASS END=179475055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1260:0,81,255:40,0 chr2 179475056 . A . PASS END=179475056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1196:0,53,255:30,0 chr2 179475057 . A . PASS END=179475066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1302:0,89,255:33,0 chr2 179475067 . A . PASS END=179475067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1150:0,74,255:31,0 chr2 179475068 . C . PASS END=179475083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1202:0,83,255:33,0 chr2 179475084 . T . PASS END=179475084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 179475085 . T . PASS END=179475088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179475089 . T . PASS END=179475089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr2 179475090 . T . PASS END=179475090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr2 179475091 . A . PASS END=179475096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,956:0,67,255:26,0 chr2 179475097 . T . PASS END=179475097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,789:0,53,255:23,0 chr2 179475098 . T . PASS END=179475102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1031:0,74,255:26,0 chr2 179475103 . T . PASS END=179475116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:54:19:0,54,810:0,57,255:19,0 chr2 179475720 . C . PASS END=179475731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,930:0,72,255:24,0 chr2 179475732 . C . PASS END=179475732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 179475733 . A . PASS END=179475735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:25,0 chr2 179475736 . G . PASS END=179475998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:31:0,90,1172:0,93,255:40,0 chr2 179476001 . G . PASS END=179476001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179476008 . A . PASS END=179476008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179476099 . A . PASS END=179476404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:34:0,84,1260:0,87,255:40,0 chr2 179476406 . T . PASS END=179476406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1094:0,57,255:27,0 chr2 179476479 . A . PASS END=179476479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 179476485 . T . PASS END=179476502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:88:35:0,88,1183:0,88,255:39,0 chr2 179476503 . A . PASS END=179476505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1366:0,100,255:39,0 chr2 179476506 . G . PASS END=179476506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1347:0,73,255:38,0 chr2 179476507 . G . PASS END=179476667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:38:0,90,1389:0,90,255:40,0 chr2 179476668 . T . PASS END=179476668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1252:0,75,255:35,0 chr2 179476669 . C . PASS END=179476681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1274:0,94,255:35,0 chr2 179476684 . A . PASS END=179476684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 179476686 . T . PASS END=179476686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 179476784 . C . PASS END=179476889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:47:0,120,1800:0,137,255:40,0 chr2 179476904 . A . PASS END=179476904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 179477004 . T . PASS END=179477178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,114,1714:0,114,255:40,1 chr2 179477179 . T . PASS END=179477179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,7:62:69:62:0,69,1659:0,69,255:40,0 chr2 179477180 . C . PASS END=179477289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:38:0,84,1260:0,107,255:40,0 chr2 179477290 . T . PASS END=179477303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:24:0,69,1035:0,72,255:24,0 chr2 179477489 . G . PASS END=179477489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 179477500 . A . PASS END=179477507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 179477508 . T . PASS END=179477508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 179477509 . C . PASS END=179477525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,961:0,72,255:26,0 chr2 179477526 . T . PASS END=179477799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:29:0,81,1056:0,83,255:40,0 chr2 179477810 . A . PASS END=179477810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 179477875 . A . PASS END=179477875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 179477883 . A . PASS END=179477883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179477885 . T . PASS END=179477885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179477888 . C . PASS END=179478003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:97:57:0,97,1800:0,97,255:40,0 chr2 179478016 . C . PASS END=179478016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 179478478 . C . PASS END=179478482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1189:0,86,255:34,0 chr2 179478483 . T . PASS END=179478483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:31,0 chr2 179478484 . G . PASS END=179478505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:36:0,95,1238:0,95,255:38,0 chr2 179478506 . T . PASS END=179478506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:37,0 chr2 179478507 . A . PASS END=179478666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:38:0,87,1305:0,98,255:40,0 chr2 179478777 . A . PASS END=179479045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:31:0,85,1083:0,85,255:40,0 chr2 179479046 . T . PASS END=179479046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr2 179479047 . G . PASS END=179479060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:31,0 chr2 179479061 . G . PASS END=179479067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:26,0 chr2 179479068 . G . PASS END=179479068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 179479069 . G . PASS END=179479074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr2 179479075 . T . PASS END=179479075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:45:31:0,45,675:0,93,255:15,0 chr2 179479088 . T . PASS END=179479088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 179479189 . T . PASS END=179479189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 179479193 . C . PASS END=179479461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:30:0,83,1080:0,83,255:40,0 chr2 179479462 . A . PASS END=179479462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:27,0 chr2 179479463 . G . PASS END=179479465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179479466 . A . PASS END=179479471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1025:0,76,255:26,0 chr2 179479472 . C . PASS END=179479472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179479473 . T . PASS END=179479473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 179479474 . G . PASS END=179479480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1062:0,84,255:28,0 chr2 179479481 . C . PASS END=179479481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179479566 . A . PASS END=179479566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:38:0,80,1130:0,80,255:33,0 chr2 179479574 . C . PASS END=179479673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:38:0,81,1215:0,102,255:40,0 chr2 179479674 . C . PASS END=179479695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:25:0,72,931:0,75,255:26,0 chr2 179479698 . G . PASS END=179479698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 179480029 . C . PASS END=179480029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:33,0 chr2 179480034 . T . PASS END=179480035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 179480036 . T . PASS END=179480036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1147:0,69,255:31,0 chr2 179480037 . G . PASS END=179480211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:34:0,92,1310:0,92,255:40,0 chr2 179480213 . T . PASS END=179480213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179480222 . T . PASS END=179480222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179480363 . C . PASS END=179480363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 179480368 . T . PASS END=179480515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:93:45:0,93,1395:0,125,255:40,0 chr2 179481203 . C . PASS END=179481204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1365:0,108,255:37,0 chr2 179481206 . T . PASS END=179481357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:98:37:0,98,1366:0,98,255:40,0 chr2 179481360 . G . PASS END=179481360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1397:0,104,255:37,0 chr2 179481456 . C . PASS END=179481457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 179481458 . A . PASS END=179481458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:32,0 chr2 179481459 . T . PASS END=179481740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:33:0,82,1113:0,82,255:40,0 chr2 179481835 . A . PASS END=179481835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179481838 . T . PASS END=179481839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,150,255:40,0 chr2 179481841 . A . PASS END=179481841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 179481846 . C . PASS END=179481961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:51:0,120,1800:0,133,255:40,0 chr2 179481965 . C . PASS END=179481965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179482052 . C . PASS END=179482236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1215:0,89,255:40,0 chr2 179482237 . T . PASS END=179482237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:26,0 chr2 179482238 . C . PASS END=179482239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179482500 . G . PASS END=179482500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr2 179482506 . C . PASS END=179482794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:35:0,88,1204:0,88,255:40,0 chr2 179482795 . A . PASS END=179482795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1458:0,74,255:37,0 chr2 179482796 . G . PASS END=179482808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,99,1485:0,102,255:39,0 chr2 179482914 . A . PASS END=179482914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 179482916 . C . PASS END=179483218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,99,1338:0,100,255:40,0 chr2 179483302 . A . PASS END=179483302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179483311 . C . PASS END=179483580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:29:0,81,1202:0,87,255:40,0 chr2 179484344 . T . PASS END=179484344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 179484347 . C . PASS END=179484353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 179484354 . G . PASS END=179484371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,721:0,60,255:26,0 chr2 179484372 . C . PASS END=179484385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr2 179484386 . G . PASS END=179484386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 179484387 . C . PASS END=179484389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 179484390 . T . PASS END=179484390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 179484391 . A . PASS END=179484614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:92:31:0,92,1004:0,92,255:40,0 chr2 179484715 . C . PASS END=179484840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:47:0,93,1420:0,93,255:40,0 chr2 179484939 . C . PASS END=179484939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 179484941 . T . PASS END=179484941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr2 179484944 . T . PASS END=179485115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:36:0,82,1155:0,82,255:40,0 chr2 179485116 . C . PASS END=179485116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr2 179485117 . T . PASS END=179485131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:38:0,111,1657:0,114,255:40,0 chr2 179485132 . A . PASS END=179485132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1513:0,69,255:40,0 chr2 179485133 . A . PASS END=179485352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:84:39:0,84,1429:0,84,255:40,0 chr2 179485354 . T . PASS END=179485354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1305:0,120,255:29,0 chr2 179485437 . C . PASS END=179485437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 179485441 . C . PASS END=179485720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:87:37:0,87,1245:0,87,255:40,0 chr2 179485733 . G . PASS END=179485733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 179485829 . C . PASS END=179485834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,82,255:29,0 chr2 179485835 . C . PASS END=179485836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:29,0 chr2 179485837 . G . PASS END=179485844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:37:0,80,1312:0,80,255:37,0 chr2 179485845 . A . PASS END=179485845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1293:0,78,255:35,0 chr2 179485846 . G . PASS END=179485848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,104,1435:0,104,255:37,0 chr2 179485849 . G . PASS END=179485849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:36,0 chr2 179485850 . C . PASS END=179486095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:37:0,87,1305:0,92,255:40,0 chr2 179486199 . T . PASS END=179486199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 179486202 . C . PASS END=179486468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:44:0,84,1539:0,84,255:40,2 chr2 179486560 . C . PASS END=179486562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 179486567 . C . PASS END=179486735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,128,255:40,1 chr2 179487386 . C . PASS END=179487386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179487396 . C . PASS END=179487495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,132,255:40,0 chr2 179489178 . A . PASS END=179489178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 179489189 . T . PASS END=179489189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 179489192 . G . PASS END=179489437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:38:0,99,1530:0,99,255:40,0 chr2 179489438 . T . PASS END=179489438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1397:0,71,255:36,0 chr2 179489439 . A . PASS END=179489458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,102,1451:0,107,255:39,0 chr2 179490000 . C . PASS END=179490123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:36:0,81,1215:0,108,255:40,0 chr2 179494028 . C . PASS END=179494049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1172:0,93,255:36,0 chr2 179494050 . T . PASS END=179494050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:35,0 chr2 179494051 . T . PASS END=179494142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:95:37:0,95,1253:0,95,255:40,0 chr2 179494143 . A . PASS END=179494154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,89,255:25,0 chr2 179494155 . A . PASS END=179494155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:23,0 chr2 179494156 . G . PASS END=179494170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 179494176 . C . PASS END=179494176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 179494965 . T . PASS END=179494965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 179494967 . C . PASS END=179494972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr2 179494973 . A . PASS END=179494976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179494977 . G . PASS END=179494983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1016:0,71,255:26,0 chr2 179494984 . G . PASS END=179495087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1072:0,80,255:37,0 chr2 179495088 . C . PASS END=179495094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 179495525 . C . PASS END=179495525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 179495527 . T . PASS END=179495527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179495531 . A . PASS END=179495636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:87:30:0,87,1305:0,90,255:40,0 chr2 179495637 . C . PASS END=179495638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:66:35:0,66,1170:0,66,255:26,0 chr2 179495639 . G . PASS END=179495653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,86,255:32,0 chr2 179495654 . C . PASS END=179495655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:31:0,68,1086:0,68,255:26,0 chr2 179495656 . G . PASS END=179495668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 179495669 . A . PASS END=179495669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:27,0 chr2 179495670 . T . PASS END=179495670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179495761 . C . PASS END=179496020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:82:40:0,82,1457:0,82,255:40,0 chr2 179496021 . T . PASS END=179496021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1283:0,78,255:34,0 chr2 179496022 . C . PASS END=179496028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1426:0,101,255:34,0 chr2 179496034 . G . PASS END=179496034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 179496869 . C . PASS END=179496869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 179496872 . A . PASS END=179496875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,970:0,78,255:26,0 chr2 179496876 . A . PASS END=179497096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,942:0,81,255:40,0 chr2 179497097 . G . PASS END=179497097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr2 179497098 . G . PASS END=179497106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1305:0,99,255:33,0 chr2 179497107 . T . PASS END=179497107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:26,0 chr2 179497108 . C . PASS END=179497112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,83,255:28,0 chr2 179497113 . A . PASS END=179497129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:23,0 chr2 179497130 . G . PASS END=179497132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 179497133 . C . PASS END=179497133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 179497134 . C . PASS END=179497134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 179497135 . G . PASS END=179497137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 179497138 . T . PASS END=179497139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:19,0 chr2 179497140 . C . PASS END=179497140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179497253 . C . PASS END=179497253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:24,0 chr2 179497254 . T . PASS END=179497259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:24,0 chr2 179497260 . G . PASS END=179497261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179497262 . T . PASS END=179497262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179497263 . C . PASS END=179497488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1215:0,87,255:40,0 chr2 179497489 . C . PASS END=179497519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,931:0,65,255:26,0 chr2 179497645 . C . PASS END=179497766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:94:37:0,94,1282:0,94,255:40,0 chr2 179497767 . C . PASS END=179497771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:34:0,66,990:0,89,255:24,0 chr2 179497914 . A . PASS END=179497915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179497916 . G . PASS END=179497916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1060:0,74,255:27,0 chr2 179497917 . G . PASS END=179497918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179497919 . A . PASS END=179497919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 179497920 . A . PASS END=179498019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:29:0,81,1215:0,87,255:40,0 chr2 179498020 . C . PASS END=179498037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:23:0,66,990:0,69,255:25,0 chr2 179498038 . A . PASS END=179498038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr2 179498039 . C . PASS END=179498040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179498041 . T . PASS END=179498041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:20,0 chr2 179498042 . T . PASS END=179498042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179498043 . T . PASS END=179498044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,685:0,52,255:21,0 chr2 179498045 . T . PASS END=179498046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 179498047 . A . PASS END=179498047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 179498048 . G . PASS END=179498051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 179498052 . A . PASS END=179498052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:20,0 chr2 179498053 . G . PASS END=179498053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 179498055 . T . PASS END=179498055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 179498063 . T . PASS END=179498063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 179498137 . C . PASS END=179498137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179498139 . C . PASS END=179498149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 179498150 . A . PASS END=179498150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 179498151 . A . PASS END=179498153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 179498154 . T . PASS END=179498154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,987:0,76,255:29,0 chr2 179498155 . T . PASS END=179498158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 179498159 . C . PASS END=179498159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 179498160 . T . PASS END=179498383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:30:0,81,1215:0,90,255:40,0 chr2 179498384 . A . PASS END=179498401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:26:0,63,945:0,78,255:26,0 chr2 179498402 . C . PASS END=179498403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:24:0,51,765:0,72,255:18,0 chr2 179498544 . C . PASS END=179498544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179498545 . T . PASS END=179498545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 179498546 . A . PASS END=179498557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:28:0,80,1164:0,80,255:31,0 chr2 179498558 . T . PASS END=179498558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 179498559 . G . PASS END=179498810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1185:0,83,255:40,0 chr2 179499086 . C . PASS END=179499086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 179499093 . C . PASS END=179499356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:31:0,90,1180:0,90,255:40,0 chr2 179499443 . C . PASS END=179499443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 179499447 . T . PASS END=179499447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 179499450 . C . PASS END=179499576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:90:33:0,90,1350:0,94,255:40,0 chr2 179499892 . A . PASS END=179500031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:91:39:0,91,1485:0,91,255:40,1 chr2 179500167 . C . PASS END=179500442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:29:0,81,1215:0,81,255:40,1 chr2 179500444 . T . PASS END=179500444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179500690 . C . PASS END=179500697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1250:0,91,255:37,0 chr2 179500698 . T . PASS END=179500698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1181:0,59,255:34,0 chr2 179500699 . T . PASS END=179500953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:35:0,95,1285:0,95,255:40,0 chr2 179500954 . A . PASS END=179500954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:33,0 chr2 179500955 . A . PASS END=179500963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:36,0 chr2 179500964 . A . PASS END=179500965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:24,0 chr2 179500966 . G . PASS END=179500968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr2 179500975 . A . PASS END=179500975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 179501123 . A . PASS END=179501526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:38:0,90,1350:0,104,255:40,0 chr2 179502095 . C . PASS END=179502146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:49:0,118,1800:0,118,255:40,0 chr2 179502149 . G . PASS END=179502149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179502153 . T . PASS END=179502153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 179502160 . A . PASS END=179502160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 179504426 . C . PASS END=179504515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:48:0,120,1800:0,144,255:40,0 chr2 179504566 . A . PASS END=179504566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr2 179504772 . C . PASS END=179504772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179504775 . C . PASS END=179504837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:38:0,108,1620:0,114,255:40,0 chr2 179505260 . A . PASS END=179505260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 179505265 . T . PASS END=179505358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:52:0,120,1800:0,140,255:40,0 chr2 179505362 . A . PASS END=179505362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179505366 . T . PASS END=179505366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr2 179505968 . C . PASS END=179506042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,212,255:40,0 chr2 179506960 . A . PASS END=179506960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 179506963 . C . PASS END=179507044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,140,255:40,0 chr2 179507048 . A . PASS END=179507048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr2 179509275 . C . PASS END=179509343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:87:0,120,1800:0,255,255:40,0 chr2 179509345 . T . PASS END=179509346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:92:0,120,1800:0,255,255:40,0 chr2 179509351 . G . PASS END=179509351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr2 179510636 . G . PASS END=179510636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 179510638 . A . PASS END=179510638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 179510647 . C . PASS END=179510757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:95:53:0,95,1543:0,95,255:40,2 chr2 179511212 . C . PASS END=179511286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:74:0,120,1800:0,215,255:40,0 chr2 179511767 . GTA G,GTATA, 0.15 DRAGENIndelHardQUAL DP=51;MQ=250.00;MQRankSum=5.661;ReadPosRankSum=-1.024;FractionInformativeReads=0.902;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:28,13,5,0:0.283,0.109,0.000:46:16,5,3,0:12,8,2,0:15:0,8,58,43,184,93,71,247,235,263:255,0,255:29,22:1.5062e-01,1.4676e+01,6.7676e+01,4.9924e+01,1.9799e+02,1.0292e+02,1.0558e+02,2.8874e+02,2.7649e+02,3.0090e+02:0.00,7.00,10.00,7.00,14.00,10.00,34.77,41.77,41.77,37.77:16,12,15,3:14,14,11,7 chr2 179511785 . A . PASS END=179511785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:99:0,120,1800:0,255,255:40,0 chr2 179511791 . C . PASS END=179511815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:108:0,120,1800:0,255,255:40,0 chr2 179511816 . A . PASS END=179511871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:108:0,120,1800:0,255,255:40,0 chr2 179512102 . G . PASS END=179512102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,142,255:40,0 chr2 179512108 . C . PASS END=179512191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,147,255:40,0 chr2 179513975 . C . PASS END=179514058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,105,1575:0,150,255:40,0 chr2 179514281 . C . PASS END=179514358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,155,255:40,0 chr2 179514537 . T . PASS END=179514537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 179514543 . C . PASS END=179514621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,189,255:40,0 chr2 179514891 . C . PASS END=179514998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,120,1800:0,129,255:40,0 chr2 179515464 . G . PASS END=179515464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 179515469 . C . PASS END=179515469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 179515471 . C . PASS END=179515471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 179515474 . G . PASS END=179515474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 179515477 . C . PASS END=179515561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:44:0,115,1507:0,115,255:40,0 chr2 179515571 . T . PASS END=179515571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1532:0,118,255:40,0 chr2 179515969 . C . PASS END=179516047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:82:0,120,1800:0,146,255:40,0 chr2 179516055 . T . PASS END=179516055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,247,255:40,0 chr2 179516176 . A . PASS END=179516176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 179516180 . C . PASS END=179516263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,161,255:40,0 chr2 179516266 . A . PASS END=179516266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,181,255:40,0 chr2 179516278 . A . PASS END=179516278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 179516391 . A . PASS END=179516477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:39:0,93,1395:0,101,255:40,0 chr2 179516605 . A . PASS END=179516605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179516609 . A . PASS END=179516609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr2 179516611 . C . PASS END=179516694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1798:0,120,255:40,0 chr2 179516817 . T . PASS END=179516817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 179516823 . C . PASS END=179516906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:50:0,96,1800:0,96,255:40,0 chr2 179516985 . G . PASS END=179516985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 179516991 . C . PASS END=179517020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,99,1352:0,100,255:40,0 chr2 179517021 . G . PASS END=179517021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:40,0 chr2 179517022 . A . PASS END=179517074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:39:0,92,1407:0,92,255:40,0 chr2 179517088 . A . PASS END=179517088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 179517185 . C . PASS END=179517264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:37:0,90,1275:0,90,255:40,0 chr2 179517265 . G . PASS END=179517265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1343:0,73,255:35,0 chr2 179517266 . G . PASS END=179517268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1398:0,81,255:36,0 chr2 179517277 . A . PASS END=179517277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1429:0,52,255:39,0 chr2 179517283 . G . PASS END=179517283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 179517376 . A . PASS END=179517376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,114,1710:0,118,255:37,0 chr2 179517380 . C . PASS END=179517463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:41:0,93,1391:0,93,255:40,0 chr2 179517575 . C . PASS END=179517584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:36:0,94,1283:0,94,255:36,0 chr2 179517585 . A . PASS END=179517585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1172:0,75,255:34,0 chr2 179517586 . G . PASS END=179517588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1213:0,91,255:38,0 chr2 179517589 . A . PASS END=179517589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1343:0,73,255:38,0 chr2 179517590 . C . PASS END=179517613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:40:0,81,1360:0,81,255:40,0 chr2 179517614 . A . PASS END=179517614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:58:46:0,58,1502:0,58,255:40,0 chr2 179517615 . G . PASS END=179517619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1560:0,105,255:40,0 chr2 179517620 . T . PASS END=179517620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:50:46:0,50,1403:0,50,255:40,0 chr2 179517621 . T . PASS END=179517658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:33:0,87,1305:0,89,255:40,0 chr2 179517768 . C . PASS END=179517768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1396:0,98,255:35,0 chr2 179517769 . T . PASS END=179517769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1228:0,75,255:35,0 chr2 179517770 . T . PASS END=179517772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1317:0,98,255:36,0 chr2 179517773 . A . PASS END=179517774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:37:0,67,1221:0,67,255:34,0 chr2 179517775 . A . PASS END=179517786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1240:0,91,255:34,0 chr2 179517787 . A . PASS END=179517787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr2 179517788 . G . PASS END=179517789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 179517790 . T . PASS END=179517790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1089:0,58,255:33,0 chr2 179517791 . T . PASS END=179517807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1308:0,92,255:36,0 chr2 179517808 . T . PASS END=179517808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:34,0 chr2 179517809 . G . PASS END=179517851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:37:0,87,1333:0,87,255:38,0 chr2 179517965 . C . PASS END=179518048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,117,1713:0,117,255:40,0 chr2 179518154 . C . PASS END=179518154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179518155 . T . PASS END=179518155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 179518156 . G . PASS END=179518158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179518159 . A . PASS END=179518159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 179518160 . C . PASS END=179518160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179518161 . A . PASS END=179518220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,878:0,61,255:26,0 chr2 179518221 . T . PASS END=179518221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 179518222 . G . PASS END=179518232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 179518233 . C . PASS END=179518234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 179518338 . T . PASS END=179518338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 179518348 . C . PASS END=179518362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,427:0,36,255:13,0 chr2 179518363 . C . PASS END=179518363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 179518364 . T . PASS END=179518364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,421:0,39,255:13,0 chr2 179518365 . T . PASS END=179518365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 179518366 . C . PASS END=179518372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,383:0,39,255:13,0 chr2 179518373 . T . PASS END=179518373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 179518374 . G . PASS END=179518375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 179518376 . G . PASS END=179518376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 179518377 . G . PASS END=179518377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr2 179518378 . G . PASS END=179518379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 179518380 . G . PASS END=179518380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 179518381 . G . PASS END=179518381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 179518382 . A . PASS END=179518385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,405:0,25,255:10,0 chr2 179518386 . T . PASS END=179518387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 179518388 . A . PASS END=179518390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr2 179518391 . A . LowGQ END=179518391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:10,0 chr2 179518392 . A . PASS END=179518392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:10,0 chr2 179518393 . C . PASS END=179518393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:10,0 chr2 179518394 . T . PASS END=179518396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,358:0,33,255:11,0 chr2 179518397 . C . PASS END=179518397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 179518398 . T . PASS END=179518400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 179518401 . T . PASS END=179518401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 179518402 . C . PASS END=179518426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:12,0 chr2 179518427 . C . PASS END=179518428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 179518429 . C . PASS END=179518429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 179518544 . C . PASS END=179518624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:87:0,120,1800:0,215,255:40,0 chr2 179518629 . A . PASS END=179518629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,253,255:40,0 chr2 179518632 . G . PASS END=179518632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr2 179518739 . C . PASS END=179518822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,118,1616:0,118,255:40,0 chr2 179518935 . C . PASS END=179519018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:78:0,120,1800:0,207,255:40,0 chr2 179519172 . C . PASS END=179519172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 179519173 . T . PASS END=179519173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:20,0 chr2 179519174 . T . PASS END=179519181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,886:0,61,255:22,0 chr2 179519182 . T . PASS END=179519182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 179519183 . G . PASS END=179519186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 179519187 . C . PASS END=179519187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 179519188 . T . PASS END=179519203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,821:0,66,255:22,0 chr2 179519204 . G . PASS END=179519204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 179519205 . G . PASS END=179519206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 179519207 . G . PASS END=179519207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 179519208 . G . PASS END=179519208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 179519209 . C . PASS END=179519209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,726:0,58,255:24,0 chr2 179519210 . A . PASS END=179519210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 179519211 . C . PASS END=179519211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 179519212 . C . PASS END=179519224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,864:0,75,255:25,0 chr2 179519225 . T . PASS END=179519225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,860:0,44,255:22,0 chr2 179519226 . C . PASS END=179519244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:26,0 chr2 179519245 . T . PASS END=179519246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 179519247 . G . PASS END=179519247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:25,0 chr2 179519248 . C . PASS END=179519248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 179519249 . A . PASS END=179519253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 179519254 . T . PASS END=179519257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179519258 . G . PASS END=179519261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179519472 . C . PASS END=179519552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:12,0 chr2 179519553 . G . PASS END=179519555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 179519563 . G . PASS END=179519563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 179519637 . A . PASS END=179519637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 179519639 . C . PASS END=179519640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:5,0 chr2 179519641 . T . LowGQ END=179519641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,155:21,0,176:5,0 chr2 179519642 . T . PASS END=179519642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,225:0,18,225:5,0 chr2 179519643 . T . LowGQ END=179519643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:0:6:0,0,133:21,0,154:5,0 chr2 179519644 . G . PASS END=179519722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr2 179522225 . C . PASS END=179522308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,120,1800:0,140,255:40,0 chr2 179522414 . C . PASS END=179522432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr2 179522433 . T . PASS END=179522464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr2 179522465 . C . PASS END=179522468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 179522469 . C . PASS END=179522483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr2 179522484 . G . PASS END=179522494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 179522608 . C . PASS END=179522613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 179522614 . C . PASS END=179522614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 179522615 . A . PASS END=179522615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 179522616 . G . PASS END=179522633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,372:0,30,255:11,0 chr2 179522634 . G . PASS END=179522642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 179522643 . G . PASS END=179522661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,443:0,33,255:12,0 chr2 179522662 . C . PASS END=179522671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 179522672 . T . PASS END=179522676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 179522677 . G . PASS END=179522677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 179522678 . A . PASS END=179522688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 179522804 . C . PASS END=179522884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:75:0,120,1800:0,215,255:40,0 chr2 179522999 . C . PASS END=179522999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 179523000 . T . PASS END=179523000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:14,0 chr2 179523001 . G . PASS END=179523002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 179523003 . A . PASS END=179523003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 179523004 . A . PASS END=179523008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:16,0 chr2 179523009 . G . PASS END=179523009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 179523010 . G . PASS END=179523013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,574:0,48,255:16,0 chr2 179523014 . C . PASS END=179523014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:15,0 chr2 179523015 . T . PASS END=179523037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,590:0,45,255:16,0 chr2 179523038 . T . PASS END=179523044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 179523045 . T . PASS END=179523057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:14,0 chr2 179523058 . A . PASS END=179523058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:13,0 chr2 179523059 . C . PASS END=179523060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 179523061 . A . PASS END=179523062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 179523063 . T . PASS END=179523063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 179523064 . T . PASS END=179523064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,380:0,12,255:10,0 chr2 179523065 . C . PASS END=179523068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 179523069 . A . PASS END=179523072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr2 179523073 . G . PASS END=179523079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 179523080 . G . PASS END=179523080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr2 179523081 . C . PASS END=179523082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,426:0,33,255:11,0 chr2 179523182 . A . PASS END=179523182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 179523195 . C . PASS END=179523209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1149:0,93,255:32,0 chr2 179523210 . C . PASS END=179523210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,808:0,62,255:30,0 chr2 179523211 . T . PASS END=179523243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:32:0,82,1101:0,82,255:33,0 chr2 179523244 . C . PASS END=179523244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:30,0 chr2 179523245 . T . PASS END=179523259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1194:0,83,255:32,0 chr2 179523260 . T . PASS END=179523260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:29,0 chr2 179523261 . C . PASS END=179523261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 179523262 . T . PASS END=179523262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 179523263 . T . PASS END=179523266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 179523267 . G . PASS END=179523278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,77,255:25,0 chr2 179523427 . C . PASS END=179523427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 179523431 . C . PASS END=179523521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1342:0,95,255:38,0 chr2 179523732 . C . PASS END=179523792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:8,0 chr2 179523793 . A . PASS END=179523815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,210:0,18,180:6,0 chr2 179523899 . C . LowGQ END=179523948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:0:2:0,0,8:0,0,33:2,0 chr2 179523949 . T . PASS END=179524015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,70:0,6,70:2,0 chr2 179526486 . C . PASS END=179526569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:56:0,120,1800:0,154,255:40,0 chr2 179526675 . C . PASS END=179526676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,45,255:9,0 chr2 179526677 . G . PASS END=179526680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,32,255:10,0 chr2 179526681 . C . PASS END=179526681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr2 179526682 . A . PASS END=179526685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr2 179526686 . G . PASS END=179526686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 179526687 . G . PASS END=179526695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 179526696 . G . PASS END=179526696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 179526697 . C . PASS END=179526713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr2 179526714 . G . PASS END=179526714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 179526715 . T . PASS END=179526729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,311:0,27,255:9,0 chr2 179526730 . C . PASS END=179526730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 179526731 . A . PASS END=179526731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 179526732 . C . PASS END=179526736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 179526737 . T . PASS END=179526755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 179526869 . C . PASS END=179526874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr2 179526875 . C . PASS END=179526875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 179526876 . A . PASS END=179526883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:8,0 chr2 179526884 . C . PASS END=179526884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 179526885 . T . PASS END=179526904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,264:0,24,221:9,0 chr2 179526905 . C . PASS END=179526922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr2 179526923 . C . PASS END=179526931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 179526932 . C . PASS END=179526933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 179526934 . T . PASS END=179526934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,341:0,19,255:9,0 chr2 179526935 . C . PASS END=179526949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,343:0,30,255:12,0 chr2 179527065 . C . PASS END=179527145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,119,1800:0,119,255:40,0 chr2 179527260 . C . PASS END=179527266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:16,0 chr2 179527267 . T . PASS END=179527267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 179527268 . G . PASS END=179527281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,601:0,40,255:18,0 chr2 179527282 . T . PASS END=179527282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,499:0,37,255:17,0 chr2 179527283 . T . PASS END=179527286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 179527287 . T . PASS END=179527288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 179527289 . A . PASS END=179527291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 179527292 . G . PASS END=179527293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 179527294 . T . PASS END=179527294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 179527295 . G . PASS END=179527295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:15,0 chr2 179527296 . C . PASS END=179527297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 179527298 . T . PASS END=179527298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:15,0 chr2 179527299 . T . PASS END=179527302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 179527303 . A . PASS END=179527303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 179527304 . A . PASS END=179527308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr2 179527309 . C . PASS END=179527309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 179527310 . T . PASS END=179527321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:14,0 chr2 179527322 . A . PASS END=179527324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 179527325 . T . PASS END=179527325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,319:0,9,255:12,0 chr2 179527326 . C . PASS END=179527326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 179527327 . T . PASS END=179527327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 179527328 . T . PASS END=179527328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 179527329 . G . PASS END=179527329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 179527330 . A . PASS END=179527331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 179527332 . C . PASS END=179527332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 179527333 . A . PASS END=179527343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 179527456 . C . PASS END=179527461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 179527462 . C . PASS END=179527465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 179527466 . T . PASS END=179527468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179527469 . G . PASS END=179527470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179527471 . C . PASS END=179527471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,684:0,50,255:25,0 chr2 179527472 . T . PASS END=179527481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr2 179527482 . T . PASS END=179527482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 179527483 . T . PASS END=179527488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 179527489 . C . PASS END=179527489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 179527490 . A . PASS END=179527493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179527494 . A . PASS END=179527497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 179527498 . A . PASS END=179527503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179527504 . T . PASS END=179527504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1009:0,59,255:28,0 chr2 179527505 . C . PASS END=179527507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,960:0,87,255:30,0 chr2 179527508 . T . PASS END=179527508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 179527509 . T . PASS END=179527511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 179527512 . A . PASS END=179527512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 179527513 . G . PASS END=179527513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr2 179527514 . T . PASS END=179527514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1044:0,90,255:30,0 chr2 179527515 . A . PASS END=179527516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr2 179527517 . A . PASS END=179527518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:30,0 chr2 179527519 . C . PASS END=179527521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:29,0 chr2 179527522 . C . PASS END=179527522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:28,0 chr2 179527523 . T . PASS END=179527525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1066:0,90,255:30,0 chr2 179527526 . A . PASS END=179527526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr2 179527527 . G . PASS END=179527535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 179527536 . G . PASS END=179527536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179527537 . G . PASS END=179527538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179527539 . A . PASS END=179527539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr2 179527688 . C . PASS END=179527688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 179527693 . C . PASS END=179527711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,99,1485:0,108,255:38,0 chr2 179527712 . T . PASS END=179527712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:34,0 chr2 179527713 . G . PASS END=179527730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1007:0,88,255:34,0 chr2 179527731 . A . PASS END=179527731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:33,0 chr2 179527732 . C . PASS END=179527769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:34:0,91,1215:0,91,255:35,0 chr2 179527770 . A . PASS END=179527782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:69:35:0,69,1035:0,105,255:25,0 chr2 179527788 . A . PASS END=179527788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179527791 . A . PASS END=179527791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 179527993 . C . PASS END=179528076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,129,255:40,0 chr2 179528081 . A . PASS END=179528081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 179528160 . C . PASS END=179528161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:28,0 chr2 179528162 . T . PASS END=179528168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 179528169 . G . PASS END=179528169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:23,0 chr2 179528170 . T . PASS END=179528181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,994:0,70,255:26,0 chr2 179528182 . C . PASS END=179528182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,941:0,53,255:25,0 chr2 179528183 . T . PASS END=179528184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,911:0,67,255:26,0 chr2 179528185 . T . PASS END=179528186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179528187 . T . PASS END=179528190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 179528191 . A . PASS END=179528192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179528193 . G . PASS END=179528212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,824:0,61,255:26,0 chr2 179528213 . T . PASS END=179528213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:23,0 chr2 179528214 . C . PASS END=179528222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 179528223 . C . PASS END=179528223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 179528224 . T . PASS END=179528231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 179528232 . G . PASS END=179528243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:20:0,45,675:0,56,255:18,0 chr2 179528354 . C . PASS END=179528437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:32:0,86,1166:0,86,255:39,0 chr2 179528546 . C . PASS END=179528568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1202:0,83,255:33,0 chr2 179528569 . T . PASS END=179528569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 179528570 . C . PASS END=179528619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:34:0,83,1245:0,83,255:38,0 chr2 179528620 . G . PASS END=179528620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:32,0 chr2 179528621 . C . PASS END=179528629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 179528636 . A . PASS END=179528636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 179528735 . C . PASS END=179528735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,103,1714:0,103,255:40,0 chr2 179528742 . C . PASS END=179528742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:70:49:0,70,1713:0,70,255:40,0 chr2 179528743 . T . PASS END=179528825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:89:48:0,89,1594:0,89,255:40,0 chr2 179528833 . G . PASS END=179528834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179529170 . G . PASS END=179529170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 179529187 . C . PASS END=179529264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,155,255:40,0 chr2 179529381 . C . PASS END=179529464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:64:0,115,1800:0,115,255:40,0 chr2 179529579 . C . PASS END=179529653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:64:0,120,1800:0,157,255:40,0 chr2 179530098 . A . PASS END=179530098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 179530100 . G . PASS END=179530100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 179530104 . T . PASS END=179530187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,151,255:40,0 chr2 179530430 . G . PASS END=179530430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,220,255:40,0 chr2 179530435 . C . PASS END=179530518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:82:0,120,1800:0,213,255:40,0 chr2 179530520 . T . PASS END=179530520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 179531543 . A . PASS END=179531543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 179531551 . C . PASS END=179531628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:80:0,120,1800:0,224,255:40,0 chr2 179531962 . C . PASS END=179532046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,120,1800:0,136,255:40,0 chr2 179532168 . C . PASS END=179532252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:65:0,120,1800:0,149,255:40,0 chr2 179532362 . T . PASS END=179532362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,3:100:99:100:0,120,1800:0,251,255:40,0 chr2 179532365 . C . PASS END=179532448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:74:0,120,1800:0,209,255:40,0 chr2 179534100 . T . PASS END=179534174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:65:0,120,1800:0,195,255:40,0 chr2 179534183 . A . PASS END=179534183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 179534315 . A . PASS END=179534315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,253,255:40,0 chr2 179534319 . C . PASS END=179534402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:73:0,120,1800:0,205,255:40,0 chr2 179534945 . C . PASS END=179535022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,128,255:40,0 chr2 179535817 . C . PASS END=179535897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:87:0,120,1800:0,193,255:40,0 chr2 179536695 . T . PASS END=179536695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179536698 . C . PASS END=179536994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:39:0,81,1215:0,93,255:40,0 chr2 179537004 . C . PASS END=179537004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179537132 . A . PASS END=179537132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,167,255:40,0 chr2 179537134 . C . PASS END=179537208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,169,255:40,0 chr2 179537361 . C . PASS END=179537430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,179,255:40,0 chr2 179538357 . T . PASS END=179538357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,142,255:40,0 chr2 179538360 . C . PASS END=179538438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,184,255:40,0 chr2 179539032 . C . PASS END=179539032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179539041 . C . PASS END=179539136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:36:0,81,1344:0,81,255:40,0 chr2 179539146 . G . PASS END=179539146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 179539763 . T . PASS END=179539840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:53:0,120,1800:0,159,255:40,0 chr2 179539845 . A . PASS END=179539845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 179539852 . T . PASS END=179539852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 179540395 . T . PASS END=179540395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 179540398 . C . PASS END=179540481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,162,255:40,0 chr2 179540648 . C . PASS END=179540722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:67:0,120,1800:0,166,255:40,0 chr2 179540725 . T . PASS END=179540725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 179540737 . T . PASS END=179540737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 179541928 . C . PASS END=179541936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,162,255:40,0 chr2 179541937 . G . PASS END=179542014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,137,255:40,0 chr2 179542348 . C . PASS END=179542624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:90:37:0,90,1350:0,111,255:40,0 chr2 179542625 . T . PASS END=179542625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:29,0 chr2 179542626 . G . PASS END=179542627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:28,0 chr2 179542628 . T . PASS END=179542628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1020:0,68,255:27,0 chr2 179542629 . T . PASS END=179542643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 179542644 . A . PASS END=179542644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 179542852 . C . PASS END=179542935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:63:0,120,1800:0,176,255:40,0 chr2 179542940 . A . PASS END=179542940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,157,255:40,0 chr2 179542942 . A . PASS END=179542942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179543140 . C . PASS END=179543224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,158,255:40,0 chr2 179543232 . G . PASS END=179543232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179543467 . C . PASS END=179543467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,123,255:40,0 chr2 179543470 . G . PASS END=179543470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 179543473 . C . PASS END=179543557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:90:44:0,90,1350:0,116,255:40,0 chr2 179544065 . C . PASS END=179544143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,144,255:40,0 chr2 179544320 . G . PASS END=179544320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 179544326 . C . PASS END=179544409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,120,1800:0,136,255:40,1 chr2 179544417 . G . PASS END=179544417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,99,1485:0,141,255:33,0 chr2 179544615 . A . PASS END=179544615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 179544621 . C . PASS END=179544782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:62:0,107,1800:0,107,255:40,0 chr2 179544791 . A . PASS END=179544791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 179544969 . G . PASS END=179544969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179544979 . A . PASS END=179545058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:65:0,120,1800:0,195,255:40,0 chr2 179545801 . T . PASS END=179545801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 179545804 . A . PASS END=179545804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,200,255:40,0 chr2 179545806 . C . PASS END=179545821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:72:0,120,1800:0,186,255:40,0 chr2 179545822 . A . PASS END=179545858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:83:0,120,1800:0,233,255:40,0 chr2 179545859 . C T, 49.42 PASS DP=85;MQ=249.93;MQRankSum=7.906;ReadPosRankSum=6.372;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:46,39,0:0.459,0.000:85:20,22,0:26,17,0:48:84,0,50,1395,1621,3016:255,0,255:40,0:4.9419e+01,7.1446e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,27,23,16:25,21,24,15 chr2 179545860 . G . PASS END=179545896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:82:0,120,1800:0,219,255:40,0 chr2 179545897 . C . PASS END=179545898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:87:0,120,1800:0,245,255:40,0 chr2 179545906 . G . PASS END=179545906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 179546103 . C . PASS END=179546178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:79:0,120,1800:0,210,255:40,0 chr2 179546181 . C . PASS END=179546181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:78:0,120,1800:0,235,255:40,0 chr2 179546384 . C . PASS END=179546384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 179546388 . C . PASS END=179546465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:48:0,120,1800:0,128,255:40,0 chr2 179547423 . C . PASS END=179547630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:38:0,111,1390:0,114,255:40,1 chr2 179547633 . G . PASS END=179547633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1620:0,116,255:40,0 chr2 179547935 . T . PASS END=179547935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:81:0,120,1800:0,226,255:40,0 chr2 179547937 . C . PASS END=179548018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:93:0,120,1800:0,233,255:40,0 chr2 179548726 . C . PASS END=179548746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:81:0,120,1800:0,203,255:40,0 chr2 179548747 . C . PASS END=179548809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:69:0,120,1800:0,166,255:40,0 chr2 179549054 . T . PASS END=179549054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 179549057 . C . PASS END=179549140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:53:0,120,1800:0,146,255:40,0 chr2 179549393 . C . PASS END=179549478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:48:0,117,1755:0,125,255:40,0 chr2 179549488 . C . PASS END=179549488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:35,0 chr2 179549626 . A . PASS END=179549626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 179549632 . C . PASS END=179549717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:63:0,120,1800:0,154,255:40,0 chr2 179549722 . G . PASS END=179549722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 179549726 . G . PASS END=179549726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 179549976 . A . PASS END=179549977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 179549980 . C . PASS END=179550057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,123,255:40,0 chr2 179550239 . G . PASS END=179550239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 179550244 . C . PASS END=179550326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,139,255:40,0 chr2 179552837 . C . PASS END=179552951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:50:0,120,1800:0,137,255:40,0 chr2 179552960 . G . PASS END=179552961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:46:0,120,1800:0,130,255:40,0 chr2 179553393 . C . PASS END=179553393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 179553404 . C . PASS END=179553505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:45:0,86,1620:0,86,255:40,0 chr2 179553510 . A . PASS END=179553510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 179553775 . C . PASS END=179553775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,133,255:40,0 chr2 179553779 . C . PASS END=179553804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:53:0,82,1668:0,82,255:40,0 chr2 179553805 . G . PASS END=179553863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,131,255:40,0 chr2 179554002 . A . PASS END=179554002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 179554016 . C . PASS END=179554100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:64:0,120,1800:0,163,255:40,0 chr2 179554237 . A . PASS END=179554237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179554241 . C . PASS END=179554267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,116,1529:0,116,255:40,0 chr2 179554268 . T . PASS END=179554304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,99,1485:0,111,255:40,0 chr2 179554305 . C T, 47.70 PASS DP=46;MQ=250.00;MQRankSum=5.711;ReadPosRankSum=-0.402;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,19,0:0.413,0.000:46:10,9,0:17,10,0:46:82,0,47,182,182,182:255,0,255:22,0:4.7696e+01,1.1727e-04,5.0000e+01,1.8247e+02,2.1724e+02,1.8548e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,11,10,9:17,10,14,5 chr2 179554306 . C . PASS END=179554322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1327:0,95,255:36,0 chr2 179554535 . T . PASS END=179554535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 179554539 . C . PASS END=179554624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,197,255:40,0 chr2 179556735 . T . PASS END=179556735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 179556738 . C . PASS END=179556739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 179556743 . C . PASS END=179556826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,155,255:40,0 chr2 179557224 . C . PASS END=179557307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:40:0,99,1485:0,104,255:40,0 chr2 179558332 . A . PASS END=179558332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 179558336 . C . PASS END=179558416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:59:0,120,1800:0,176,255:40,0 chr2 179558648 . C . PASS END=179558735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,206,255:40,0 chr2 179559325 . C . PASS END=179559403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:69:0,120,1800:0,153,255:40,0 chr2 179559407 . T . PASS END=179559407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:92:0,120,1800:0,255,255:40,0 chr2 179559542 . G . PASS END=179559542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:96:0,120,1800:0,255,255:40,0 chr2 179559556 . C . PASS END=179559633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:127,0:127:99:101:0,120,1800:0,255,255:40,0 chr2 179560075 . C . PASS END=179560137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:77:0,120,1800:0,210,255:40,1 chr2 179560150 . C . PASS END=179560150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:85:0,120,1800:0,255,255:40,0 chr2 179560587 . C . PASS END=179560587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 179560592 . C . PASS END=179560996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:54:0,120,1800:0,153,255:40,0 chr2 179560998 . T . PASS END=179560998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,143,255:40,0 chr2 179561000 . A . PASS END=179561000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 179561010 . A . PASS END=179561011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,114,1710:0,144,255:38,0 chr2 179561848 . C . PASS END=179561895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:74:0,120,1800:0,197,255:40,0 chr2 179563569 . C . PASS END=179563593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,202,255:40,0 chr2 179563594 . G . PASS END=179563641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:84:60:0,84,1260:0,145,255:40,0 chr2 179563642 . C . PASS END=179563642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:47:60:0,47,1707:0,47,255:26,3 chr2 179563643 . TAA TA,T,TAAA, 27.05 PASS DP=61;MQ=249.21;MQRankSum=6.055;ReadPosRankSum=0.497;FractionInformativeReads=0.951;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,13,10,11,0:0.224,0.172,0.190,0.000:58:10,5,8,4,0:14,8,2,7,0:25:35,0,50,30,144,80,86,65,138,123,49,90,168,146,139:255,0,255:24,44:2.7047e+01,1.2505e-02,5.3013e+01,3.0474e+01,1.5219e+02,8.3474e+01,8.6171e+01,7.3139e+01,1.4629e+02,1.2614e+02,7.5773e+01,1.2510e+02,2.0279e+02,1.8066e+02,1.6907e+02:0.00,8.00,11.00,8.00,16.00,11.00,8.00,16.00,16.00,11.00,34.77,42.77,42.77,42.77,37.77:15,9,18,16:15,9,15,19 chr2 179563649 . A . PASS END=179563649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr2 179565840 . A . PASS END=179565840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 179565847 . C . PASS END=179565931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:60:0,120,1800:0,176,255:40,0 chr2 179566251 . T . PASS END=179566251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 179566255 . C . PASS END=179566315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:56:0,120,1800:0,168,255:40,0 chr2 179566767 . C . PASS END=179566793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:81:0,120,1800:0,224,255:40,0 chr2 179566890 . C . PASS END=179566890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179566892 . C . PASS END=179566892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 179566894 . C . PASS END=179566959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:36:0,81,1318:0,81,255:40,0 chr2 179566960 . A . PASS END=179566960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:31,0 chr2 179566961 . C . PASS END=179566972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:37:0,87,1248:0,87,255:35,0 chr2 179566987 . C . PASS END=179566987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1247:0,89,255:31,0 chr2 179567166 . T . PASS END=179567166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1229:0,102,255:34,0 chr2 179567170 . A . PASS END=179567170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1349:0,105,255:35,0 chr2 179567179 . A . PASS END=179567179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 179567181 . C . PASS END=179567390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:31:0,84,1138:0,88,255:40,0 chr2 179567397 . A . PASS END=179567397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 179568869 . C . PASS END=179568869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 179568873 . C . PASS END=179569135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,108,1607:0,108,255:40,0 chr2 179569147 . T . PASS END=179569147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,108,1620:0,138,255:36,0 chr2 179569236 . C . PASS END=179569401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:40:0,93,1397:0,93,255:40,0 chr2 179569402 . A . PASS END=179569402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:62:55:0,62,1663:0,62,255:40,0 chr2 179569403 . A . PASS END=179569504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1350:0,84,255:40,0 chr2 179569604 . C . PASS END=179569693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:57:0,120,1800:0,122,255:40,0 chr2 179569901 . C . PASS END=179570084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,151,255:40,0 chr2 179571181 . T . PASS END=179571200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,134,255:40,0 chr2 179571201 . A . PASS END=179571201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,6:59:77:59:0,77,1698:0,77,255:40,0 chr2 179571202 . T . PASS END=179571448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:35:0,91,1485:0,91,255:40,0 chr2 179571449 . T . PASS END=179571449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:30,0 chr2 179571450 . G . PASS END=179571466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1242:0,91,255:34,0 chr2 179571589 . T . PASS END=179571681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:56:0,120,1800:0,163,255:40,0 chr2 179571683 . T . PASS END=179571683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 179572253 . C . PASS END=179572253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:29,0 chr2 179572254 . T . PASS END=179572261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 179572262 . T . PASS END=179572262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 179572263 . C . PASS END=179572486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1260:0,89,255:40,0 chr2 179572487 . C . PASS END=179572488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 179572489 . C . PASS END=179572490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr2 179572491 . C . PASS END=179572503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,900:0,62,255:25,0 chr2 179572504 . G . PASS END=179572504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:21,0 chr2 179572505 . T . PASS END=179572510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:22,0 chr2 179572511 . G . PASS END=179572511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 179572512 . C . PASS END=179572512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 179572513 . T . PASS END=179572517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 179572518 . A . PASS END=179572518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:16,0 chr2 179572519 . A . PASS END=179572527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,52,255:17,0 chr2 179572528 . G . PASS END=179572528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 179572529 . G . PASS END=179572531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 179572532 . T . PASS END=179572532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:14,0 chr2 179572533 . C . PASS END=179572540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:16,0 chr2 179572547 . T . PASS END=179572547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 179572549 . G . PASS END=179572549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 179572551 . A . PASS END=179572551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 179574293 . C . PASS END=179574583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:31:0,81,1178:0,88,255:40,0 chr2 179574597 . C . PASS END=179574597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179575351 . A . PASS END=179575351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 179575359 . T . PASS END=179575359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 179575362 . C . PASS END=179575366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,71,255:23,0 chr2 179575367 . A . PASS END=179575614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1103:0,87,255:40,0 chr2 179575615 . A . PASS END=179575644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,917:0,64,255:26,0 chr2 179575645 . C . PASS END=179575645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:20,0 chr2 179575646 . C . PASS END=179575646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 179575647 . C . PASS END=179575647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr2 179575648 . C . PASS END=179575649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 179575659 . G . PASS END=179575659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 179575788 . C . PASS END=179575801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:31:0,90,1170:0,93,255:34,0 chr2 179575802 . C . PASS END=179575802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:31,0 chr2 179575803 . C . PASS END=179576032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:34:0,93,1312:0,93,255:40,1 chr2 179576033 . A . PASS END=179576033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1488:0,74,255:38,0 chr2 179576034 . A . PASS END=179576076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1246:0,93,255:39,0 chr2 179576666 . A . PASS END=179576666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,930:0,72,255:24,0 chr2 179576670 . C . PASS END=179576674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:29,0 chr2 179576675 . A . PASS END=179576675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 179576676 . A . PASS END=179576676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,854:0,40,255:27,0 chr2 179576677 . C . PASS END=179576949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:30:0,88,1111:0,88,255:40,0 chr2 179577042 . C . PASS END=179577321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:38:0,87,1305:0,87,255:40,0 chr2 179577419 . C . PASS END=179577420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 179577424 . C . PASS END=179577424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179577425 . T . PASS END=179577425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:27,0 chr2 179577426 . T . PASS END=179577426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179577427 . T . PASS END=179577433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1045:0,71,255:26,0 chr2 179577434 . G . PASS END=179577702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:83:33:0,83,1181:0,83,255:40,0 chr2 179577802 . G . PASS END=179577802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 179577812 . C . PASS END=179578099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:96:38:0,96,1244:0,97,255:40,0 chr2 179578108 . T . PASS END=179578108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr2 179578624 . C . PASS END=179578630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,660:0,43,255:19,0 chr2 179578631 . C . PASS END=179578643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:24,0 chr2 179578644 . G . PASS END=179578652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:30,0 chr2 179578653 . T . PASS END=179578654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 179578655 . T . PASS END=179578660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 179578661 . A . PASS END=179578661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:28,0 chr2 179578662 . A . PASS END=179578902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:31:0,81,1053:0,81,255:40,2 chr2 179579014 . C . PASS END=179579014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 179579018 . C . PASS END=179579262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:36:0,81,1215:0,90,255:40,0 chr2 179579263 . A . PASS END=179579266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:36:0,75,1125:0,108,255:26,0 chr2 179579267 . A . PASS END=179579269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,86,255:27,0 chr2 179579270 . T . PASS END=179579270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 179579271 . C . PASS END=179579274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 179579275 . G . PASS END=179579275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,949:0,53,255:26,0 chr2 179579276 . A . PASS END=179579276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 179579277 . G . PASS END=179579278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 179579279 . T . PASS END=179579282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,946:0,81,255:27,0 chr2 179579283 . T . PASS END=179579283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 179579284 . C . PASS END=179579286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 179579287 . A . PASS END=179579300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,864:0,64,255:26,0 chr2 179579306 . G . PASS END=179579306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 179579708 . C . PASS END=179579708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 179579713 . C . PASS END=179579957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:34:0,81,1215:0,86,255:40,1 chr2 179579958 . A . PASS END=179579962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 179579963 . A . PASS END=179579963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 179579964 . T . PASS END=179579964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 179579965 . G . PASS END=179579978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1013:0,87,255:30,0 chr2 179579979 . A . PASS END=179579984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179579985 . G . PASS END=179579991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,954:0,81,255:27,0 chr2 179580220 . C . PASS END=179580271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1148:0,90,255:40,0 chr2 179580272 . C . PASS END=179580272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1659:0,64,255:40,0 chr2 179580273 . T . PASS END=179580491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:37:0,96,1307:0,96,255:40,0 chr2 179580492 . C . PASS END=179580492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:30,0 chr2 179580493 . T . PASS END=179580497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,98,255:32,0 chr2 179580498 . G . PASS END=179580498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:30,0 chr2 179580499 . G . PASS END=179580501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1188:0,85,255:30,0 chr2 179580505 . T . PASS END=179580505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 179580509 . A . PASS END=179580509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 179581822 . C . PASS END=179581822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1016:0,60,255:29,0 chr2 179581823 . T . PASS END=179581834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:32:0,86,1193:0,86,255:34,0 chr2 179581835 . C . PASS END=179581835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:32,0 chr2 179581836 . T . PASS END=179581869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:34:0,89,1247:0,89,255:38,0 chr2 179581870 . T . PASS END=179581870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr2 179581871 . T . PASS END=179582109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:34:0,89,1217:0,89,255:40,0 chr2 179582250 . C . PASS END=179582266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:24,0 chr2 179582267 . G . PASS END=179582388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1047:0,84,255:40,0 chr2 179582389 . A . PASS END=179582389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1443:0,79,255:37,0 chr2 179582390 . G . PASS END=179582494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1145:0,80,255:40,0 chr2 179582495 . A . PASS END=179582495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:27,0 chr2 179582496 . C . PASS END=179582537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,869:0,81,255:31,0 chr2 179582541 . T . PASS END=179582541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 179582665 . A . PASS END=179582665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 179582669 . C . PASS END=179582672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:31,0 chr2 179582673 . T . PASS END=179582673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:30,0 chr2 179582674 . G . PASS END=179582681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1189:0,88,255:33,0 chr2 179582682 . G . PASS END=179582682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1150:0,56,255:32,0 chr2 179582683 . C . PASS END=179582946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:36:0,87,1357:0,87,255:40,0 chr2 179582947 . T . PASS END=179582947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:33,0 chr2 179582948 . T . PASS END=179582948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 179583043 . A . PASS END=179583043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 179583049 . C . PASS END=179583327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:34:0,90,1197:0,91,255:40,0 chr2 179583335 . G . PASS END=179583335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 179583422 . C . PASS END=179583447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,856:0,75,255:26,0 chr2 179583448 . G . PASS END=179583459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 179583460 . G . PASS END=179583460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 179583461 . C . PASS END=179583466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:30,0 chr2 179583467 . T . PASS END=179583467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 179583468 . T . PASS END=179583691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:31:0,81,1157:0,81,255:40,0 chr2 179583692 . A . PASS END=179583700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:76:31:0,76,1011:0,76,255:27,0 chr2 179583891 . C . PASS END=179583892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 179583893 . T . PASS END=179583893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 179583894 . G . PASS END=179583897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:22,0 chr2 179583898 . A . PASS END=179583898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 179583899 . G . PASS END=179583907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,937:0,62,255:26,0 chr2 179583908 . G . PASS END=179584178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:29:0,84,1064:0,87,255:40,0 chr2 179584191 . G . PASS END=179584191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:22,0 chr2 179584281 . C . PASS END=179584283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 179584284 . A . PASS END=179584284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 179584285 . A . PASS END=179584288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1194:0,96,255:32,0 chr2 179584289 . T . PASS END=179584289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:26,0 chr2 179584290 . G . PASS END=179584558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:31:0,80,1085:0,80,255:40,0 chr2 179584559 . T . PASS END=179584559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:27,0 chr2 179584563 . A . PASS END=179584563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179584566 . G . PASS END=179584566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179584573 . T . PASS END=179584573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:26,0 chr2 179584710 . C . PASS END=179584716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 179584717 . A . PASS END=179584724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,89,255:30,0 chr2 179584725 . C . PASS END=179584726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 179584727 . G . PASS END=179584737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179584738 . T . PASS END=179584738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:26,0 chr2 179584739 . C . PASS END=179584742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1094:0,84,255:29,0 chr2 179584743 . T . PASS END=179584743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 179584744 . T . PASS END=179584761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1000:0,90,255:31,0 chr2 179584762 . T . PASS END=179584762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 179584763 . T . PASS END=179584789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:31:0,82,1081:0,82,255:34,0 chr2 179584790 . G . PASS END=179584790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:31,0 chr2 179584791 . C . PASS END=179584893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1227:0,84,255:40,0 chr2 179584894 . A . PASS END=179584894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 179584895 . G . PASS END=179584897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1157:0,93,255:31,0 chr2 179584898 . A . PASS END=179584900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr2 179584901 . G . PASS END=179584912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1125:0,80,255:30,0 chr2 179584913 . T . PASS END=179584913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:26,0 chr2 179584914 . C . PASS END=179584915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 179584916 . A . PASS END=179584916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:30,0 chr2 179584917 . C . PASS END=179584934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,88,255:30,0 chr2 179584935 . C . PASS END=179584935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:27,0 chr2 179584936 . A . PASS END=179584937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179584938 . C . PASS END=179584940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179584941 . C . PASS END=179584942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179584943 . C . PASS END=179584943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:27,0 chr2 179584944 . C . PASS END=179584944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179584945 . A . PASS END=179584945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 179584946 . A . PASS END=179584947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179584948 . A . PASS END=179584961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:28:0,75,1125:0,84,255:26,0 chr2 179584962 . C . PASS END=179584972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 179584973 . T . PASS END=179584973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179584974 . T . PASS END=179584979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 179584980 . A . PASS END=179584991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 179585001 . G . PASS END=179585001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 179585112 . C . PASS END=179585112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 179585113 . T . PASS END=179585113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 179585114 . T . PASS END=179585125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr2 179585126 . G . PASS END=179585131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:28,0 chr2 179585132 . G . PASS END=179585132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 179585133 . A . PASS END=179585140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:86:29:0,86,819:0,86,255:31,0 chr2 179585141 . T . PASS END=179585141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr2 179585142 . C . PASS END=179585149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1164:0,96,255:32,0 chr2 179585150 . A . PASS END=179585151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 179585152 . C . PASS END=179585155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 179585156 . T . PASS END=179585156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1026:0,79,255:29,0 chr2 179585157 . T . PASS END=179585159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:30,0 chr2 179585160 . T . PASS END=179585160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1037:0,60,255:26,0 chr2 179585161 . A . PASS END=179585161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179585162 . G . PASS END=179585162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 179585163 . C . PASS END=179585163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179585164 . T . PASS END=179585164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:29:31:0,29,931:0,29,255:25,0 chr2 179585165 . T . PASS END=179585170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:31,0 chr2 179585171 . T . PASS END=179585171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 179585172 . G . PASS END=179585173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179585174 . T . PASS END=179585174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:25,0 chr2 179585175 . A . PASS END=179585228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:31:0,80,1109:0,80,255:40,0 chr2 179585229 . G . PASS END=179585265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,121,255:40,0 chr2 179585266 . C T, 200.50 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,29,0:0,22,0:150:238,154,0,1978,154,1978:255,153,0:0,0:2.0050e+02,1.5050e+02,0.0000e+00,4.5000e+02,1.8527e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,26:0,0,31,20 chr2 179585267 . T . PASS END=179585303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,120,1800:0,130,255:40,0 chr2 179585304 . G . PASS END=179585352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:36:0,87,1305:0,98,255:40,0 chr2 179585353 . T . PASS END=179585390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,770:0,66,255:26,0 chr2 179585396 . A . PASS END=179585396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 179585400 . A . PASS END=179585400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 179585648 . C . PASS END=179585653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,931:0,78,255:26,0 chr2 179585654 . C . PASS END=179585799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1215:0,84,255:40,0 chr2 179585800 . A . PASS END=179585800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr2 179585801 . G . PASS END=179585808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:32,0 chr2 179585809 . T . PASS END=179585811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 179585812 . T . PASS END=179585821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:29,0 chr2 179585822 . A . PASS END=179585822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 179585823 . T . PASS END=179585825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 179585826 . A . PASS END=179585832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:73:28:0,73,964:0,73,255:26,0 chr2 179585833 . A . PASS END=179585869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr2 179585870 . T . PASS END=179585915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,885:0,67,255:26,0 chr2 179585916 . A . PASS END=179585916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:23,0 chr2 179585917 . A . PASS END=179585917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 179585918 . A . PASS END=179585918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,853:0,48,255:21,0 chr2 179585919 . C . PASS END=179585929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,947:0,64,255:24,0 chr2 179585944 . A . PASS END=179585944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 179586574 . C . PASS END=179586574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 179586575 . T . PASS END=179586575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 179586576 . T . PASS END=179586583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 179586584 . G . PASS END=179586590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr2 179586591 . G . PASS END=179586591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179586592 . C . PASS END=179586593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr2 179586594 . G . PASS END=179586861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:31:0,87,1227:0,93,255:40,0 chr2 179586868 . G . PASS END=179586868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 179586974 . G . PASS END=179586974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179586981 . C . PASS END=179586981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 179586986 . C . PASS END=179587012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1208:0,83,255:39,1 chr2 179587013 . A . PASS END=179587014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:69:40:0,69,1285:0,69,255:37,1 chr2 179587015 . G . PASS END=179587273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,99,1335:0,101,255:40,0 chr2 179587278 . A . PASS END=179587278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:42:0,93,1395:0,126,255:31,0 chr2 179587280 . G . PASS END=179587280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:40:0,93,1395:0,120,255:31,0 chr2 179587287 . T . PASS END=179587287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179587372 . T . PASS END=179587372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 179587379 . T . PASS END=179587379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 179587386 . C . PASS END=179587386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 179587387 . T . PASS END=179587387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:32,0 chr2 179587388 . T . PASS END=179587664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:35:0,84,1230:0,84,255:40,0 chr2 179587670 . G . PASS END=179587670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 179587773 . C . PASS END=179588046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:37:0,87,1305:0,101,255:40,0 chr2 179588047 . T . PASS END=179588050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:72:37:0,72,1080:0,97,255:26,0 chr2 179588051 . T . PASS END=179588051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1215:0,103,255:26,0 chr2 179588145 . C . PASS END=179588422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:33:0,81,1215:0,99,255:40,0 chr2 179588423 . T . PASS END=179588424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:69:40:0,69,1035:0,120,255:26,0 chr2 179588427 . T . PASS END=179588427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr2 179588431 . G . PASS END=179588431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:34:0,66,990:0,102,255:22,0 chr2 179588578 . C . PASS END=179588578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 179588583 . C . PASS END=179588844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:34:0,88,1158:0,88,255:40,0 chr2 179588845 . T . PASS END=179588845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr2 179588846 . G . PASS END=179588856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1162:0,83,255:32,0 chr2 179588857 . A . PASS END=179588858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 179588859 . G . PASS END=179588860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 179588861 . A . PASS END=179588861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,94,255:25,0 chr2 179588862 . C . PASS END=179588870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1219:0,88,255:30,0 chr2 179588987 . C . PASS END=179589198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:85:37:0,85,1374:0,85,255:40,0 chr2 179589199 . T . PASS END=179589199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:34,0 chr2 179589200 . C . PASS END=179589241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1217:0,81,255:35,0 chr2 179589242 . C . PASS END=179589242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 179589243 . C . PASS END=179589261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr2 179589262 . G . PASS END=179589266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 179589271 . A . PASS END=179589271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 179590090 . C . PASS END=179590090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 179590094 . C . PASS END=179590376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:36:0,88,1243:0,88,255:40,0 chr2 179590495 . C . PASS END=179590738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:33:0,80,1215:0,80,255:40,0 chr2 179590739 . T . PASS END=179590759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,65,255:26,0 chr2 179590760 . A . PASS END=179590773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr2 179590777 . C . PASS END=179590777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 179591817 . C . PASS END=179591817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 179591818 . T . PASS END=179591822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,679:0,63,255:25,0 chr2 179591823 . C . PASS END=179591825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 179591826 . T . PASS END=179591826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 179591827 . A . PASS END=179591827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:26,0 chr2 179591828 . A . PASS END=179592098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:82:28:0,82,1052:0,82,255:40,0 chr2 179592105 . A . PASS END=179592105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 179592111 . G . PASS END=179592111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 179592307 . C . PASS END=179592307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1282:0,94,255:34,0 chr2 179592312 . C . PASS END=179592590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:35:0,90,1221:0,95,255:40,0 chr2 179592594 . T . PASS END=179592594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 179592836 . C . PASS END=179592842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,992:0,65,255:25,0 chr2 179592843 . C . PASS END=179593124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:31:0,84,1305:0,84,255:40,0 chr2 179593220 . T . PASS END=179593220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 179593225 . A . PASS END=179593225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1164:0,88,255:31,0 chr2 179593227 . C . PASS END=179593471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:34:0,91,1062:0,91,255:40,0 chr2 179593472 . A . PASS END=179593472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1072:0,36,255:28,0 chr2 179593473 . C . PASS END=179593478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1227:0,88,255:32,0 chr2 179593479 . T . PASS END=179593479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1250:0,77,255:31,0 chr2 179593480 . A . PASS END=179593487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:34:0,85,1097:0,85,255:33,0 chr2 179593488 . C . PASS END=179593488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1172:0,72,255:28,0 chr2 179593489 . T . PASS END=179593505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1169:0,80,255:32,0 chr2 179593509 . T . PASS END=179593509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 179593618 . C . PASS END=179593760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1156:0,83,255:40,0 chr2 179593761 . T . PASS END=179593761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:34,0 chr2 179593762 . C . PASS END=179593826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,89,255:37,0 chr2 179593827 . C . PASS END=179593842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,84,255:26,0 chr2 179593843 . A . PASS END=179593843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:24,0 chr2 179593844 . A . PASS END=179593857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 179593858 . T . PASS END=179593858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 179593859 . A . PASS END=179593862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 179593863 . G . PASS END=179593863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:20,0 chr2 179593864 . T . PASS END=179593868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 179593869 . T . PASS END=179593869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:20,0 chr2 179593870 . C . PASS END=179593873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 179593874 . C . PASS END=179593874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 179593875 . T . PASS END=179593877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 179593878 . T . PASS END=179593882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 179593883 . G . PASS END=179593892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 179593893 . G . PASS END=179593893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 179593894 . G . PASS END=179593896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179594015 . C . PASS END=179594026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:25,0 chr2 179594027 . C . PASS END=179594245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1141:0,80,255:40,0 chr2 179594246 . A . PASS END=179594246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1137:0,69,255:29,0 chr2 179594247 . T . PASS END=179594259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:82:29:0,82,1073:0,82,255:29,0 chr2 179594260 . A . PASS END=179594260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 179594261 . C . PASS END=179594261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179594262 . A . PASS END=179594262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 179594263 . G . PASS END=179594263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179594264 . G . PASS END=179594264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 179594265 . C . PASS END=179594265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179594266 . T . PASS END=179594266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 179594267 . T . PASS END=179594269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 179594270 . G . PASS END=179594293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,71,255:26,0 chr2 179594387 . G . PASS END=179594387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 179594391 . C . PASS END=179594397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1040:0,84,255:29,0 chr2 179594398 . T . PASS END=179594402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:51:30:0,51,950:0,51,255:30,0 chr2 179594403 . G . PASS END=179594570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:33:0,82,1241:0,82,255:40,0 chr2 179594571 . C . PASS END=179594571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:31,0 chr2 179594572 . T . PASS END=179594572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1241:0,89,255:32,0 chr2 179594573 . C . PASS END=179594573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:28,0 chr2 179594574 . G . PASS END=179594591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1194:0,86,255:32,0 chr2 179594592 . T . PASS END=179594592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1241:0,74,255:31,0 chr2 179594593 . T . PASS END=179594634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1197:0,86,255:34,0 chr2 179594635 . T . PASS END=179594660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,886:0,61,255:26,0 chr2 179594661 . A . PASS END=179594666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 179594667 . G . PASS END=179594672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,968:0,68,255:25,0 chr2 179594808 . T . PASS END=179594808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 179594820 . C . PASS END=179594824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 179594825 . A . PASS END=179594825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr2 179594826 . C . PASS END=179594835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:25:0,61,787:0,61,255:26,0 chr2 179594836 . G . PASS END=179594837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179594838 . C . PASS END=179594839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:70:29:0,70,905:0,70,255:28,0 chr2 179594840 . T . PASS END=179594840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179594841 . T . PASS END=179594843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:28,0 chr2 179594844 . T . PASS END=179594844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1035:0,87,255:29,0 chr2 179594845 . G . PASS END=179594845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 179594846 . G . PASS END=179594846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179594847 . T . PASS END=179594851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179594852 . G . PASS END=179594853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179594854 . G . PASS END=179594854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr2 179594855 . C . PASS END=179594857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:30,0 chr2 179594858 . A . PASS END=179594858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 179594859 . C . PASS END=179595051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1105:0,81,255:40,0 chr2 179595052 . G . PASS END=179595074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,978:0,67,255:26,0 chr2 179595075 . G . PASS END=179595075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:26,0 chr2 179595076 . C . PASS END=179595079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179595080 . T . PASS END=179595083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:26:0,65,992:0,65,255:25,0 chr2 179595084 . C . PASS END=179595098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:50:20:0,50,765:0,50,255:19,0 chr2 179595230 . A . PASS END=179595233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 179595234 . T . PASS END=179595234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:27,0 chr2 179595235 . T . PASS END=179595246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 179595247 . G . PASS END=179595247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:30,0 chr2 179595248 . C . PASS END=179595487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:31:0,80,1133:0,80,255:40,0 chr2 179595488 . C . PASS END=179595489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:73:30:0,73,923:0,73,255:30,0 chr2 179595490 . T . PASS END=179595495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:32,0 chr2 179595496 . T . PASS END=179595496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:29,0 chr2 179595497 . G . PASS END=179595506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:29,0 chr2 179595507 . G . PASS END=179595507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:26,0 chr2 179595508 . G . PASS END=179595509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 179595510 . A . PASS END=179595514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:31:0,63,945:0,76,255:23,0 chr2 179595515 . A . PASS END=179595515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:59:31:0,59,927:0,59,255:19,0 chr2 179595516 . A . PASS END=179595519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:31:0,63,945:0,82,255:22,0 chr2 179595645 . T . PASS END=179595645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr2 179595652 . C . PASS END=179595930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:40:0,85,1413:0,85,255:40,0 chr2 179596031 . C . PASS END=179596237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:87:38:0,87,1305:0,110,255:40,0 chr2 179596238 . G . PASS END=179596244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,77,255:26,0 chr2 179596245 . G . PASS END=179596251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1024:0,81,255:27,0 chr2 179596252 . A . PASS END=179596252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 179596253 . G . PASS END=179596258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179596259 . C . PASS END=179596260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179596261 . T . PASS END=179596262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179596263 . C . PASS END=179596272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,84,255:26,0 chr2 179596273 . G . PASS END=179596279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:23:0,57,855:0,64,255:19,0 chr2 179596280 . C . PASS END=179596290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr2 179596291 . C . PASS END=179596291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 179596292 . T . PASS END=179596294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,724:0,66,255:22,0 chr2 179596295 . A . PASS END=179596295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:20,0 chr2 179596296 . T . PASS END=179596296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 179596297 . G . PASS END=179596297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 179596298 . A . PASS END=179596298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 179596299 . A . PASS END=179596299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:14:26:0,14,693:0,14,255:20,0 chr2 179596300 . G . PASS END=179596301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:25,0 chr2 179596302 . A . PASS END=179596302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,886:0,26,255:23,0 chr2 179596303 . T . PASS END=179596310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:27:0,73,988:0,73,255:25,0 chr2 179596317 . G . PASS END=179596317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,807:0,45,255:23,0 chr2 179596319 . A . PASS END=179596319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,762:0,45,255:23,0 chr2 179596420 . C . PASS END=179596437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,801:0,69,255:24,0 chr2 179596438 . C . PASS END=179596448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:45:23:0,45,675:0,69,255:19,0 chr2 179596449 . C . PASS END=179596454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 179596455 . C . PASS END=179596455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 179596456 . C . PASS END=179596471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:26,0 chr2 179596472 . C . PASS END=179596492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1141:0,84,255:35,0 chr2 179596493 . A . PASS END=179596493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr2 179596494 . T . PASS END=179596647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:33:0,87,1257:0,89,255:40,0 chr2 179596648 . A . PASS END=179596662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:24:0,66,990:0,72,255:26,0 chr2 179596663 . C . PASS END=179596663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 179596664 . A . PASS END=179596698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,809:0,69,255:26,0 chr2 179596791 . A . PASS END=179596791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,996:0,90,255:30,0 chr2 179596793 . C . PASS END=179596794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 179596795 . T . PASS END=179596795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,965:0,76,255:30,0 chr2 179596796 . T . PASS END=179597057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:31:0,88,1157:0,88,255:40,0 chr2 179597058 . A . PASS END=179597058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1390:0,76,255:34,0 chr2 179597059 . A . PASS END=179597074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:37:0,87,1371:0,87,255:37,0 chr2 179597160 . T . PASS END=179597160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 179597166 . C . PASS END=179597174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr2 179597175 . A . PASS END=179597178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 179597179 . A . PASS END=179597180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 179597181 . T . PASS END=179597181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,945:0,79,255:29,0 chr2 179597182 . T . PASS END=179597185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr2 179597186 . A . PASS END=179597186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179597187 . C . PASS END=179597445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:30:0,81,1215:0,90,255:40,0 chr2 179597561 . C . PASS END=179597682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1225:0,86,255:40,0 chr2 179597683 . A . PASS END=179597683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1543:0,58,255:39,0 chr2 179597684 . A . PASS END=179597800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:44:0,89,1530:0,89,255:40,0 chr2 179597801 . T . PASS END=179597801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1427:0,71,255:32,0 chr2 179597802 . A . PASS END=179597826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1158:0,85,255:34,0 chr2 179597827 . A . PASS END=179597848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:26,0 chr2 179597966 . C . PASS END=179597975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1000:0,68,255:26,0 chr2 179597976 . G . PASS END=179598245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1096:0,90,255:40,0 chr2 179598326 . T . PASS END=179598326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 179598332 . T . PASS END=179598332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 179598340 . C . PASS END=179598361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1325:0,81,255:40,0 chr2 179598362 . C . PASS END=179598398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,107,1419:0,107,255:40,0 chr2 179598399 . C T, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=2.614;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,26,0:0.531,0.000:49:11,15,0:12,11,0:48:85,0,50,925,823,1748:255,0,255:22,0:5.0000e+01,6.6786e-05,5.2670e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,11,11,15:16,7,12,14 chr2 179598400 . G . PASS END=179598436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,134,255:40,0 chr2 179598437 . T . PASS END=179598561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:37:0,84,1260:0,97,255:40,0 chr2 179598562 . A . PASS END=179598565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:38:0,75,1125:0,97,255:25,0 chr2 179598566 . T . PASS END=179598566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:26:31:0,26,657:0,26,255:22,0 chr2 179598567 . T . PASS END=179598573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,1035:0,74,255:25,0 chr2 179598574 . C . PASS END=179598574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr2 179598575 . C . PASS END=179598587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,923:0,75,255:25,0 chr2 179598588 . A . PASS END=179598588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:21,0 chr2 179598589 . T . PASS END=179598591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 179598592 . T . PASS END=179598592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,817:0,36,255:21,0 chr2 179598593 . C . PASS END=179598598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:23,0 chr2 179598599 . T . PASS END=179598599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 179598600 . C . PASS END=179598600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 179598601 . T . PASS END=179598601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,738:0,52,255:22,0 chr2 179598602 . T . PASS END=179598604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,773:0,36,255:22,0 chr2 179598605 . C . PASS END=179598619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,795:0,63,255:23,0 chr2 179598621 . T . PASS END=179598621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 179598623 . G . PASS END=179598623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 179598626 . A . PASS END=179598627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 179599054 . C . PASS END=179599077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,760:0,63,255:26,0 chr2 179599078 . C . PASS END=179599204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:32:0,96,1218:0,96,255:40,0 chr2 179599205 . G . PASS END=179599241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,114,1710:0,114,255:40,0 chr2 179599242 . T C, 49.02 PASS DP=47;MQ=250.00;MQRankSum=5.831;ReadPosRankSum=-0.310;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,21,0:0.447,0.000:47:7,11,0:19,10,0:48:84,0,50,749,913,1662:255,0,255:22,0:4.9020e+01,7.6105e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,18,6,15:17,9,10,11 chr2 179599243 . G . PASS END=179599279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:36:0,90,1311:0,97,255:40,0 chr2 179599280 . T . PASS END=179599298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1202:0,86,255:33,0 chr2 179599299 . T . PASS END=179599303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:30:0,77,1116:0,77,255:26,0 chr2 179599304 . G . PASS END=179599310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179599311 . A . PASS END=179599311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:27,0 chr2 179599312 . G . PASS END=179599315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179599316 . T . PASS END=179599316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 179599317 . G . PASS END=179599323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 179599324 . G . PASS END=179599325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr2 179599326 . A . PASS END=179599326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179599327 . G . PASS END=179599333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,70,255:24,0 chr2 179599335 . T . PASS END=179599335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 179599434 . C . PASS END=179599453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,729:0,57,255:19,0 chr2 179599454 . C . PASS END=179599454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:18,0 chr2 179599455 . T . PASS END=179599456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 179599457 . C . PASS END=179599457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179599458 . A . PASS END=179599458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 179599459 . G . PASS END=179599461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,742:0,66,255:22,0 chr2 179599462 . A . PASS END=179599462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 179599463 . T . PASS END=179599473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:62:22:0,62,799:0,62,255:26,0 chr2 179599474 . G . PASS END=179599476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179599477 . A . PASS END=179599477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 179599478 . T . PASS END=179599478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179599479 . T . PASS END=179599479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:28,0 chr2 179599480 . C . PASS END=179599593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:29:0,80,1125:0,80,255:40,0 chr2 179599594 . G . PASS END=179599594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1451:0,79,255:38,0 chr2 179599595 . T . PASS END=179599683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1202:0,83,255:40,0 chr2 179599684 . G . PASS END=179599696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,870:0,64,255:24,0 chr2 179599697 . T . PASS END=179599715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:19,0 chr2 179600238 . C . PASS END=179600525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:30:0,83,1164:0,83,255:40,0 chr2 179600526 . T . PASS END=179600562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,111,1665:0,123,255:40,0 chr2 179600563 . G A, 169.48 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,23,0:0,18,0:119:207,122,0,1523,122,1523:255,123,0:0,0:1.6948e+02,1.1948e+02,0.0000e+00,4.5000e+02,1.5425e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,24:0,0,23,18 chr2 179600564 . G . PASS END=179600647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:35:0,84,1228:0,84,255:38,0 chr2 179600648 . C T, 45.37 PASS DP=37;MQ=249.97;MQRankSum=5.026;ReadPosRankSum=3.899;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,14,0:0.378,0.000:37:14,6,0:9,8,0:45:80,0,50,501,794,1294:255,0,255:22,0:4.5372e+01,1.4781e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,4,10:12,11,10,4 chr2 179600649 . T . PASS END=179600685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:35:0,83,1205:0,83,255:36,0 chr2 179600686 . C . PASS END=179600753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1156:0,81,255:37,0 chr2 179600754 . A . PASS END=179600754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1036:0,79,255:28,0 chr2 179600755 . A . PASS END=179600768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 179600769 . T . PASS END=179600781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 179600782 . A . PASS END=179600784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179600785 . G . PASS END=179600797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 179600798 . G . PASS END=179600798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr2 179600799 . C . PASS END=179600801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,809:0,69,255:23,0 chr2 179600803 . T . PASS END=179600803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179602809 . C . PASS END=179602809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 179602810 . T . PASS END=179602824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:25,0 chr2 179602825 . G . PASS END=179602825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 179602826 . G . PASS END=179602828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,911:0,62,255:26,0 chr2 179602829 . G . PASS END=179602829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 179602830 . T . PASS END=179602834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 179602835 . C . PASS END=179602835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179602836 . T . PASS END=179602837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:27,0 chr2 179602838 . A . PASS END=179603016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:30:0,84,1260:0,90,255:40,0 chr2 179603017 . A . PASS END=179603017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1196:0,67,255:35,0 chr2 179603018 . C . PASS END=179603040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1255:0,86,255:36,0 chr2 179603041 . C . PASS END=179603052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:25:0,63,945:0,75,255:24,0 chr2 179603053 . C . PASS END=179603053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:20,0 chr2 179603054 . A . PASS END=179603088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,731:0,63,255:22,0 chr2 179603868 . C . PASS END=179603874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:23,0 chr2 179603875 . T . PASS END=179603875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 179603876 . A . PASS END=179603888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,853:0,66,255:26,0 chr2 179603889 . T . PASS END=179603894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 179603895 . A . PASS END=179603895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 179603896 . A . PASS END=179603909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr2 179603910 . C . PASS END=179603910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 179603911 . G . PASS END=179604344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:28:0,81,1055:0,81,255:40,0 chr2 179604345 . T . PASS END=179604345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:33,0 chr2 179604346 . A . PASS END=179604434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:37:0,81,1242:0,81,255:40,0 chr2 179604435 . A . PASS END=179604435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1235:0,56,255:35,0 chr2 179604436 . A . PASS END=179604624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:38:0,90,1296:0,90,255:40,0 chr2 179604625 . A . PASS END=179604625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1467:0,74,255:38,0 chr2 179604626 . A . PASS END=179604691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1127:0,80,255:39,0 chr2 179604692 . T . PASS END=179604692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 179604693 . C . PASS END=179604703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,999:0,90,255:30,0 chr2 179604704 . A . PASS END=179604704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:29,0 chr2 179604705 . G . PASS END=179604731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1097:0,80,255:32,0 chr2 179604732 . C . PASS END=179604737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:30:0,66,990:0,90,255:26,0 chr2 179604738 . C . PASS END=179604742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,89,255:27,0 chr2 179604743 . G . PASS END=179604743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 179604744 . C . PASS END=179604744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 179604745 . T . PASS END=179604745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179604746 . G . PASS END=179604746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179604747 . C . PASS END=179604747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 179604748 . T . PASS END=179604752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 179604753 . A . PASS END=179604755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179604756 . C . PASS END=179604763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179604764 . A . PASS END=179604764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 179604765 . T . PASS END=179604772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,880:0,84,255:28,0 chr2 179604773 . T . PASS END=179604781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 179604782 . A . PASS END=179604782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179604783 . A . PASS END=179604786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:27:0,73,948:0,73,255:26,0 chr2 179604787 . C . PASS END=179604788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179604789 . G . PASS END=179604789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 179604790 . C . PASS END=179604792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179604793 . T . PASS END=179604793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 179604794 . T . PASS END=179604794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179604795 . C . PASS END=179604795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 179604796 . T . PASS END=179604799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179604800 . A . PASS END=179604801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1030:0,68,255:27,0 chr2 179604802 . A . PASS END=179604813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1011:0,84,255:31,0 chr2 179604814 . G . PASS END=179604814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 179604815 . C . PASS END=179605078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:28:0,80,1055:0,80,255:40,0 chr2 179605079 . T . PASS END=179605115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:37:0,94,1189:0,94,255:40,0 chr2 179605116 . T G, 49.96 PASS DP=38;MQ=250.00;MQRankSum=5.181;ReadPosRankSum=3.570;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,18,0:0.486,0.000:37:7,11,0:12,7,0:48:85,0,50,599,622,1221:255,0,255:19,0:4.9964e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,13,5,13:12,7,8,10 chr2 179605117 . C . PASS END=179605153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:37:0,93,1395:0,104,255:36,0 chr2 179605154 . T . PASS END=179605301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1176:0,81,255:38,0 chr2 179605302 . G . PASS END=179605304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:61:33:0,61,1146:0,61,255:31,0 chr2 179605305 . C . PASS END=179605805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1251:0,81,255:40,0 chr2 179605806 . A . PASS END=179605842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:38:0,81,1377:0,81,255:40,0 chr2 179605843 . G A, 47.19 PASS DP=45;MQ=250.00;MQRankSum=5.618;ReadPosRankSum=2.792;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,18,0:0.400,0.000:45:14,6,0:13,12,0:45:82,0,47,182,182,182:255,0,255:20,0:4.7195e+01,1.2633e-04,5.0000e+01,1.8196e+02,2.1673e+02,1.8497e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,15,10,8:15,12,12,6 chr2 179605844 . G . PASS END=179605880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:40:0,91,1534:0,91,255:40,0 chr2 179605881 . G . PASS END=179606500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,117,1755:0,122,255:40,0 chr2 179606501 . G . PASS END=179606537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,111,1742:0,111,255:40,0 chr2 179606538 . G A, 48.18 PASS DP=49;MQ=250.00;MQRankSum=5.930;ReadPosRankSum=4.879;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,21,0:0.429,0.000:49:12,9,0:16,12,0:47:83,0,50,714,985,1700:255,0,255:28,0:4.8176e+01,8.7754e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,9,12:20,8,9,12 chr2 179606539 . G . PASS END=179606575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,137,255:40,0 chr2 179606576 . T . PASS END=179606648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:36:0,84,1421:0,84,255:40,0 chr2 179606656 . G . PASS END=179606656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 179610047 . A . PASS END=179610047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 179610312 . T . PASS END=179611727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:36:0,83,1235:0,83,255:40,0 chr2 179611728 . A . PASS END=179611728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:36,0 chr2 179611729 . T . PASS END=179611809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1141:0,80,255:37,0 chr2 179611810 . T . PASS END=179611810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:27,0 chr2 179611811 . A . PASS END=179611811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 179611812 . T . PASS END=179611817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:65:32:0,65,1149:0,65,255:26,0 chr2 179611818 . T . PASS END=179611818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:26,0 chr2 179611819 . A . PASS END=179611819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 179611820 . G . PASS END=179611822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1132:0,83,255:28,0 chr2 179611823 . T . PASS END=179611823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 179611824 . C . PASS END=179611827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:32:0,84,1260:0,95,255:32,0 chr2 179611828 . C . PASS END=179611829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1239:0,75,255:32,0 chr2 179611830 . T . PASS END=179611841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1227:0,88,255:34,0 chr2 179611842 . G . PASS END=179611842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:47:36:0,47,1241:0,47,255:33,0 chr2 179611843 . T . PASS END=179611844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1294:0,92,255:35,0 chr2 179611845 . T . PASS END=179611845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1186:0,75,255:33,0 chr2 179611846 . C . PASS END=179612405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:36:0,80,1412:0,80,255:40,0 chr2 179612406 . T . PASS END=179612406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1449:0,68,255:34,0 chr2 179612407 . T . PASS END=179612591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:34:0,80,1217:0,80,255:40,0 chr2 179612592 . T . PASS END=179612592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1367:0,74,255:37,0 chr2 179612593 . T . PASS END=179614914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:36:0,90,1350:0,90,255:40,1 chr2 179614915 . G . PASS END=179614951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:59:0,120,1800:0,167,255:40,0 chr2 179614952 . A G, 227.58 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,30,0:0,30,0:178:265,181,0,2318,181,2318:255,183,0:0,0:2.2758e+02,1.7758e+02,0.0000e+00,4.5000e+02,2.1235e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,30:0,0,30,30 chr2 179614953 . C . PASS END=179614989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:64:0,120,1800:0,175,255:40,0 chr2 179614990 . A . PASS END=179615849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:47:0,105,1591:0,105,255:40,1 chr2 179615850 . A . PASS END=179615886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,158,255:40,0 chr2 179615887 . T C, 233.14 PASS DP=63;MQ=250.00;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,29,0:0,33,0:183:271,186,0,2351,186,2351:255,186,0:0,0:2.3314e+02,1.8314e+02,0.0000e+00,4.5000e+02,2.1791e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,34:0,0,33,29 chr2 179615888 . C . PASS END=179615930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,158,255:40,0 chr2 179615931 . C G, 199.50 PASS DP=55;MQ=250.00;MQRankSum=1.668;ReadPosRankSum=-1.219;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,53,0:0.981,0.000:54:1,26,0:0,27,0:150:237,153,0,2032,160,2039:255,146,0:1,0:1.9950e+02,1.4950e+02,0.0000e+00,4.5000e+02,1.9128e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,32,21:0,1,25,28 chr2 179615932 . A . PASS END=179615993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,129,255:40,0 chr2 179615994 . T C, 245.17 PASS DP=66;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,34,0:0,32,0:195:283,198,0,2498,198,2498:255,198,0:0,0:2.4517e+02,1.9517e+02,0.0000e+00,4.5000e+02,2.2994e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,39,27:0,0,33,33 chr2 179615995 . G . PASS END=179616031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:64:0,120,1800:0,146,255:40,0 chr2 179616032 . T . PASS END=179616720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,101,1800:0,101,255:40,1 chr2 179616721 . C . PASS END=179616742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:54:0,90,1350:0,111,255:40,0 chr2 179616743 . C . PASS END=179616746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:63:54:0,63,945:0,90,255:25,0 chr2 179616747 . T . PASS END=179616756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:42:47:0,42,630:0,109,255:19,0 chr2 179616757 . G . PASS END=179616761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:21:47:0,21,315:0,111,255:9,0 chr2 179616762 . T . PASS END=179616766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:18:44:0,18,270:0,53,255:6,0 chr2 179617850 . C . PASS END=179617907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,149,255:40,0 chr2 179618573 . T . PASS END=179618718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:91:44:0,91,1665:0,91,255:40,0 chr2 179618719 . T . PASS END=179618719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1433:0,79,255:34,0 chr2 179618720 . G . PASS END=179618736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,104,1488:0,104,255:36,0 chr2 179620947 . A . PASS END=179620947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,703:0,66,255:22,0 chr2 179620949 . C . PASS END=179620950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 179620951 . C T, 112.75 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,12,0:0,10,0:63:151,66,0,816,66,816:255,66,0:0,0:1.1275e+02,6.2752e+01,2.3297e-06,4.5000e+02,9.7522e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,6:0,0,10,12 chr2 179620952 . C . PASS END=179620954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 179620955 . C . PASS END=179620955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 179620956 . T . PASS END=179620988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1135:0,93,255:40,0 chr2 179620989 . A . PASS END=179621439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:98:45:0,98,1655:0,98,255:40,0 chr2 179621440 . T . PASS END=179621476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,111,1698:0,111,255:40,0 chr2 179621477 . C T, 175.49 PASS DP=43;MQ=249.41;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,22,0:0,21,0:125:213,128,0,1599,128,1599:255,129,0:0,0:1.7549e+02,1.2549e+02,0.0000e+00,4.5000e+02,1.6026e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,32:0,0,22,21 chr2 179621478 . G . PASS END=179621499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:29:0,81,1215:0,87,255:39,0 chr2 179621500 . G . PASS END=179621501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 179621502 . A . PASS END=179621502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179621503 . C T, 49.96 PASS DP=29;MQ=249.12;MQRankSum=4.561;ReadPosRankSum=2.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,14,0:0.483,0.000:29:7,7,0:8,7,0:48:85,0,50,501,498,999:255,0,255:14,0:4.9957e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,12,5,9:7,8,6,8 chr2 179621504 . T . PASS END=179621507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,896:0,84,255:28,0 chr2 179621508 . C . PASS END=179621514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:23,0 chr2 179621515 . A . PASS END=179621524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:23:0,42,630:0,65,255:17,0 chr2 179621534 . C . PASS END=179621534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr2 179622269 . C . PASS END=179622269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 179622270 . T . PASS END=179622270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:16,0 chr2 179622271 . T . PASS END=179622271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,550:0,34,255:16,0 chr2 179622272 . T . PASS END=179622274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 179622275 . G . PASS END=179622275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 179622276 . A . PASS END=179622278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:18,0 chr2 179622279 . C . PASS END=179622281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:23,0 chr2 179622282 . T . PASS END=179622282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 179622283 . G . PASS END=179622289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,847:0,69,255:25,0 chr2 179622290 . T . PASS END=179622291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:25,0 chr2 179622292 . G . PASS END=179622292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 179622293 . C . PASS END=179622326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,980:0,81,255:36,0 chr2 179622327 . T . PASS END=179622327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:33,0 chr2 179622328 . T . PASS END=179622350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1388:0,98,255:39,0 chr2 179622351 . C . PASS END=179622351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:35,0 chr2 179622352 . T . PASS END=179622455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1080:0,91,255:40,1 chr2 179622456 . T . PASS END=179622457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:54:35:0,54,1198:0,54,255:30,1 chr2 179622458 . G . PASS END=179622459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:70:35:0,70,1245:0,70,255:30,1 chr2 179622460 . A . PASS END=179622460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:54:35:0,54,1212:0,54,255:29,1 chr2 179622461 . T . PASS END=179622463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:64:33:0,64,1099:0,64,255:30,1 chr2 179622464 . C . PASS END=179622464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:48:33:0,48,1112:0,48,255:27,1 chr2 179622465 . T . PASS END=179622466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:64:32:0,64,1170:0,64,255:28,1 chr2 179622467 . G . PASS END=179622468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1185:0,80,255:27,0 chr2 179622469 . T . PASS END=179622474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179622475 . A . PASS END=179622475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179622476 . T . PASS END=179622477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr2 179622478 . C . PASS END=179622479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179622480 . A . PASS END=179622490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:27:0,74,1086:0,74,255:26,0 chr2 179622491 . C . PASS END=179622612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1213:0,81,255:40,0 chr2 179622613 . T . PASS END=179622614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,975:0,79,255:30,0 chr2 179622615 . T . PASS END=179622619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 179622620 . T . PASS END=179622620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr2 179622621 . A . PASS END=179622621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 179622622 . T . PASS END=179622622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr2 179622623 . T . PASS END=179622624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 179622625 . T . PASS END=179622625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 179622626 . C . PASS END=179622632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 179622633 . T . PASS END=179622633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 179622634 . T . PASS END=179622636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179622637 . C . PASS END=179622643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:25,0 chr2 179623709 . A . PASS END=179623709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 179623711 . C . PASS END=179623720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,629:0,48,255:18,0 chr2 179623721 . C . PASS END=179623730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:25,0 chr2 179623731 . G . PASS END=179623757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,986:0,81,255:40,0 chr2 179623758 . C T, 181.52 PASS DP=45;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,23,0:0,22,0:132:219,135,0,1670,135,1670:255,141,0:0,0:1.8152e+02,1.3152e+02,0.0000e+00,4.5000e+02,1.6629e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,18:0,0,21,24 chr2 179623759 . T . PASS END=179623795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,116,1415:0,116,255:40,0 chr2 179623796 . A . PASS END=179623889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:37:0,81,1215:0,111,255:40,0 chr2 179623890 . A . PASS END=179623894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1125:0,89,255:25,0 chr2 179623895 . T . PASS END=179623899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:28,0 chr2 179623903 . C . PASS END=179623903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr2 179623905 . A . PASS END=179623905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1054:0,84,255:28,0 chr2 179628899 . C . PASS END=179628899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1474:0,117,255:39,0 chr2 179628904 . C . PASS END=179629029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:39:0,104,1411:0,104,255:40,0 chr2 179629252 . A . PASS END=179629252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1271:0,89,255:33,0 chr2 179629254 . C . PASS END=179629325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:35:0,95,1311:0,95,255:40,0 chr2 179629326 . C . PASS END=179629362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:39:0,96,1510:0,96,255:40,0 chr2 179629363 . T C, 172.47 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,21,0:0,21,0:122:210,125,0,310,310,310:255,126,0:0,0:1.7247e+02,1.2247e+02,0.0000e+00,3.0724e+02,3.4201e+02,3.1025e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,20:0,0,21,21 chr2 179629364 . T . PASS END=179629384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1247:0,87,255:35,0 chr2 179629385 . T . PASS END=179629385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1263:0,53,255:32,0 chr2 179629386 . T . PASS END=179629400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1294:0,92,255:34,0 chr2 179629401 . T . PASS END=179629423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1280:0,92,255:35,0 chr2 179629424 . T . PASS END=179629450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1216:0,83,255:33,0 chr2 179629451 . C . PASS END=179629460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:32:0,66,990:0,96,255:24,0 chr2 179629461 . C T, 140.30 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:90:178,93,0,1201,93,1201:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,18:0,0,17,14 chr2 179629462 . G . PASS END=179629462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 179629463 . G . PASS END=179629482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 179629483 . G . PASS END=179629487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 179629488 . A . PASS END=179629488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179629489 . C . PASS END=179629498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:26,0 chr2 179629499 . A . PASS END=179629527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,515:0,45,255:17,0 chr2 179629528 . C . PASS END=179629538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 179631103 . C . PASS END=179631103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1319:0,105,255:35,0 chr2 179631108 . C . PASS END=179631339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:35:0,87,1305:0,90,255:40,0 chr2 179631342 . G . PASS END=179631342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:25,0 chr2 179631349 . G . PASS END=179631349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 179632486 . C . PASS END=179632496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:26,0 chr2 179632497 . T . PASS END=179632498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 179632499 . T . PASS END=179632499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 179632500 . T . PASS END=179632504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 179632505 . C . PASS END=179632505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 179632506 . T . PASS END=179632513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 179632514 . C . PASS END=179632514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 179632515 . G . PASS END=179632579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:28:0,84,964:0,84,255:40,0 chr2 179632580 . T . PASS END=179632580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1332:0,67,255:33,0 chr2 179632581 . T . PASS END=179632594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1280:0,92,255:35,0 chr2 179632595 . A . PASS END=179632595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:30,0 chr2 179632596 . T . PASS END=179632607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:31,0 chr2 179632608 . G . PASS END=179632640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,892:0,61,255:26,0 chr2 179632641 . G . PASS END=179632641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 179632642 . A . PASS END=179632644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 179632645 . C . PASS END=179632645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 179632646 . T . PASS END=179632650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 179632651 . T . PASS END=179632651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:20,0 chr2 179632737 . T . PASS END=179632737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 179632741 . C . PASS END=179632741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 179632742 . T . PASS END=179632742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 179632743 . G . PASS END=179632747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 179632748 . T . PASS END=179632866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:32:0,82,1127:0,82,255:40,0 chr2 179632867 . A . PASS END=179632867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:27,0 chr2 179632868 . A . PASS END=179632883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1034:0,83,255:30,0 chr2 179632884 . T . PASS END=179632884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr2 179632890 . A . PASS END=179632890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179633395 . C . PASS END=179633395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 179633399 . C . PASS END=179633403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 179633404 . C . PASS END=179633404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 179633405 . A . PASS END=179633408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 179633409 . A . PASS END=179633409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 179633410 . A . PASS END=179633412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr2 179633413 . T . PASS END=179633413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 179633414 . G . PASS END=179633417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr2 179633418 . C . PASS END=179633422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 179633423 . G . PASS END=179633423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 179633424 . A . PASS END=179633425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 179633426 . G . PASS END=179633426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 179633427 . T . PASS END=179633427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 179633428 . T . PASS END=179633438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 179633439 . C . PASS END=179633442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179633443 . A . PASS END=179633443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 179633444 . A . PASS END=179633445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,870:0,61,255:26,0 chr2 179633446 . G . PASS END=179633617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:29:0,84,1086:0,87,255:40,0 chr2 179633618 . T . PASS END=179633618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:36,0 chr2 179633619 . C . PASS END=179633645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,92,255:38,0 chr2 179633646 . A . PASS END=179633660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,65,255:25,0 chr2 179634392 . A . PASS END=179634392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,2 chr2 179634405 . C . PASS END=179634407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 179634408 . G . PASS END=179634408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 179634409 . T . PASS END=179634412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:18:0,44,720:0,44,255:19,0 chr2 179634413 . T . PASS END=179634414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 179634415 . T . PASS END=179634417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr2 179634418 . G . PASS END=179634422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:25,0 chr2 179634423 . G . PASS END=179634424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179634425 . A . PASS END=179634431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1039:0,84,255:33,0 chr2 179634432 . T . PASS END=179634432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:32,0 chr2 179634433 . G . PASS END=179634666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:33:0,81,1194:0,83,255:40,0 chr2 179634782 . C . PASS END=179634782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179634787 . T . PASS END=179635047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,108,1511:0,108,255:40,0 chr2 179635138 . C . PASS END=179635150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 179635151 . G . PASS END=179635351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:31:0,81,1215:0,93,255:40,0 chr2 179635352 . C . PASS END=179635352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 179635353 . C . PASS END=179635364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:28,0 chr2 179635365 . C . PASS END=179635372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr2 179635373 . G . PASS END=179635393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:17:0,41,630:0,41,255:17,0 chr2 179635394 . T . PASS END=179635394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 179635395 . T . PASS END=179635402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 179635933 . C . PASS END=179635933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179635938 . C . PASS END=179635938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179635939 . T . PASS END=179635939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 179635940 . T . PASS END=179635945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1025:0,84,255:29,0 chr2 179635946 . T . PASS END=179635946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:27,0 chr2 179635947 . T . PASS END=179635954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179635955 . G . PASS END=179635956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,978:0,67,255:27,0 chr2 179635957 . A . PASS END=179635958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 179635959 . A . PASS END=179635960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,873:0,67,255:27,0 chr2 179635961 . G . PASS END=179635969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:30,0 chr2 179635970 . G . PASS END=179635970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 179635971 . T . PASS END=179635972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 179635973 . G . PASS END=179635973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 179635974 . C . PASS END=179636170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1117:0,90,255:40,0 chr2 179636171 . T . PASS END=179636183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 179636184 . T . PASS END=179636195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:19:0,45,675:0,57,255:19,0 chr2 179636196 . C . PASS END=179636196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 179636197 . A . PASS END=179636198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 179637836 . C . PASS END=179638058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:43:0,84,1260:0,112,255:40,0 chr2 179638059 . A . PASS END=179638059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:78:43:0,78,1170:0,129,255:26,0 chr2 179638060 . C . PASS END=179638063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:37:0,84,1260:0,111,255:29,0 chr2 179638064 . T . PASS END=179638091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 179638092 . A . PASS END=179638092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 179638093 . A . PASS END=179638096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,778:0,66,255:22,0 chr2 179638189 . T . PASS END=179638209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:31:0,88,1180:0,88,255:35,0 chr2 179638210 . T . PASS END=179638210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr2 179638211 . G . PASS END=179638226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:37:0,81,1250:0,81,255:38,0 chr2 179638227 . A . PASS END=179638227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:58:38:0,58,1199:0,58,255:34,0 chr2 179638228 . C . PASS END=179638431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:33:0,81,1134:0,82,255:40,0 chr2 179638432 . G . PASS END=179638435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,83,255:25,0 chr2 179638436 . T . PASS END=179638440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1115:0,80,255:29,0 chr2 179638441 . T . PASS END=179638449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:25,0 chr2 179638450 . C . PASS END=179638452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:19,0 chr2 179638560 . C . PASS END=179638560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 179638565 . T . PASS END=179638576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,953:0,65,255:26,0 chr2 179638577 . C . PASS END=179638608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1125:0,87,255:36,0 chr2 179638609 . A . PASS END=179638609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr2 179638610 . T . PASS END=179638837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1286:0,81,255:40,0 chr2 179638931 . T . PASS END=179638931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 179638933 . C . PASS END=179638942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1437:0,114,255:39,0 chr2 179638943 . T . PASS END=179638943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1321:0,78,255:38,0 chr2 179638944 . T . PASS END=179638955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:39:0,87,1383:0,87,255:40,0 chr2 179638956 . T . PASS END=179638956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1349:0,54,255:36,0 chr2 179638957 . G . PASS END=179639200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:40:0,93,1382:0,93,255:40,0 chr2 179639636 . G . PASS END=179639636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 179639648 . C . PASS END=179639929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:39:0,102,1291:0,102,255:40,0 chr2 179640068 . A . PASS END=179640068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179640082 . C . PASS END=179640088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 179640089 . C . PASS END=179640089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 179640090 . A . PASS END=179640100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 179640101 . C . PASS END=179640101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 179640102 . G . PASS END=179640112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1188:0,93,255:33,0 chr2 179640113 . T . PASS END=179640113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:32,0 chr2 179640114 . T . PASS END=179640199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:35:0,96,1161:0,96,255:40,0 chr2 179640200 . C . PASS END=179640200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:69:50:0,69,1584:0,69,255:40,0 chr2 179640201 . T . PASS END=179640237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:47:0,98,1573:0,98,255:40,0 chr2 179640238 . A . PASS END=179640238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:63:48:0,63,1395:0,63,255:40,0 chr2 179640239 . T . PASS END=179640719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1144:0,81,255:40,0 chr2 179640720 . A . PASS END=179640720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:38,0 chr2 179640721 . A . PASS END=179641369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:85:34:0,85,1241:0,85,255:40,1 chr2 179641370 . C . PASS END=179641370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1371:0,62,255:36,0 chr2 179641371 . A . PASS END=179641466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:36:0,87,1296:0,87,255:40,0 chr2 179641467 . T . PASS END=179641467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1170:0,68,255:40,0 chr2 179641468 . T . PASS END=179641548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:34:0,81,1189:0,88,255:40,0 chr2 179641549 . T . PASS END=179641556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,96,255:26,0 chr2 179641557 . C . PASS END=179641776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1169:0,80,255:40,0 chr2 179641778 . T . PASS END=179641778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 179641876 . C . PASS END=179642044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,99,1485:0,113,255:40,0 chr2 179642049 . A . PASS END=179642049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:35,0 chr2 179642051 . G . PASS END=179642051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,126,255:35,0 chr2 179642147 . C . PASS END=179642149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:31,0 chr2 179642150 . C . PASS END=179642150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:30,0 chr2 179642151 . C . PASS END=179642153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 179642154 . A . PASS END=179642155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:32:0,74,1111:0,74,255:33,0 chr2 179642156 . T . PASS END=179642162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:34:0,88,1123:0,88,255:34,0 chr2 179642163 . C . PASS END=179642163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:32,0 chr2 179642164 . A . PASS END=179642311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:34:0,87,1158:0,88,255:40,0 chr2 179642430 . C . PASS END=179642435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1211:0,83,255:30,0 chr2 179642436 . T . PASS END=179642436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1265:0,74,255:30,0 chr2 179642437 . G . PASS END=179642438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 179642439 . A . PASS END=179642439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1166:0,71,255:30,0 chr2 179642440 . A . PASS END=179642448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1127:0,82,255:33,0 chr2 179642449 . T . PASS END=179642449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1262:0,67,255:35,0 chr2 179642450 . C . PASS END=179642462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1427:0,101,255:40,0 chr2 179642463 . C . PASS END=179642661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:31:0,84,1186:0,93,255:40,2 chr2 179642662 . T . PASS END=179642693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,65,255:26,0 chr2 179642694 . G . PASS END=179642694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 179642695 . A . PASS END=179642696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 179642697 . A . PASS END=179642697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,632:0,52,255:21,0 chr2 179642698 . G . PASS END=179642702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 179643601 . C . PASS END=179643606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,582:0,48,255:19,0 chr2 179643607 . C . PASS END=179643619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:61:21:0,61,784:0,61,255:26,0 chr2 179643620 . C . PASS END=179643845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:27:0,81,1016:0,81,255:40,0 chr2 179643955 . C . PASS END=179643971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,104,1465:0,104,255:40,0 chr2 179643972 . C . PASS END=179643997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,105,1701:0,105,255:40,0 chr2 179643998 . A . PASS END=179644034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:60:0,120,1800:0,150,255:40,0 chr2 179644035 . G A, 236.60 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,29,0:0,34,0:187:274,190,0,2419,190,2419:255,193,0:0,0:2.3660e+02,1.8660e+02,0.0000e+00,4.5000e+02,2.2137e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,28:0,0,35,28 chr2 179644036 . A . PASS END=179644072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:66:0,120,1800:0,182,255:40,0 chr2 179644073 . G . PASS END=179644189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:43:0,108,1499:0,111,255:40,0 chr2 179644723 . T . PASS END=179644723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 179644726 . C . PASS END=179644817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,152,255:40,0 chr2 179644818 . T . PASS END=179644854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,158,255:40,0 chr2 179644855 . T C, 218.09 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,33,0:0,24,0:168:256,171,0,2165,171,2165:255,174,0:0,0:2.1809e+02,1.6809e+02,0.0000e+00,4.5000e+02,2.0286e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,30:0,0,33,24 chr2 179644856 . A . PASS END=179644892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,136,255:40,0 chr2 179644893 . A . PASS END=179644932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:30:0,87,1305:0,90,255:40,0 chr2 179645848 . C . PASS END=179645990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:49:0,117,1800:0,117,255:40,2 chr2 179646927 . C . PASS END=179646927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 179646939 . C . PASS END=179646949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:24,0 chr2 179646950 . G . PASS END=179646967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1035:0,87,255:30,0 chr2 179646968 . T . PASS END=179646968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 179646969 . T . PASS END=179647154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:90:30:0,90,1103:0,90,255:40,1 chr2 179647163 . A . PASS END=179647163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,139,255:40,0 chr2 179647266 . C . PASS END=179647329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:83:0,120,1800:0,216,255:40,0 chr2 179647331 . T . PASS END=179647331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,252,255:40,0 chr2 179647528 . C . PASS END=179647528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 179647533 . C . PASS END=179647544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1172:0,96,255:34,0 chr2 179647545 . G . PASS END=179647545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:33,0 chr2 179647546 . A . PASS END=179647661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:89:35:0,89,1241:0,89,255:40,0 chr2 179647662 . T . PASS END=179647662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:73:53:0,73,1707:0,73,255:40,0 chr2 179647663 . C . PASS END=179647747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:36:0,96,1352:0,100,255:40,0 chr2 179647748 . A . PASS END=179647748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:32,0 chr2 179647749 . A . PASS END=179647765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1181:0,88,255:34,0 chr2 179647766 . T . PASS END=179647766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1143:0,71,255:30,0 chr2 179647767 . C . PASS END=179647776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1158:0,85,255:31,0 chr2 179647777 . C . PASS END=179647778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179647779 . C . PASS END=179647784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 179647785 . T . PASS END=179647791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:29:0,63,945:0,71,255:26,0 chr2 179648447 . C . PASS END=179648512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:74:0,120,1800:0,206,255:40,0 chr2 179648526 . A . PASS END=179648526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 179648797 . C . PASS END=179648797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 179648798 . T . PASS END=179648798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr2 179648799 . T . PASS END=179648806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 179648807 . C T, 49.69 PASS DP=28;MQ=250.00;MQRankSum=4.468;ReadPosRankSum=1.566;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,13,0:0.464,0.000:28:7,4,0:8,9,0:48:84,0,50,457,537,993:255,0,255:14,0:4.9687e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,7,6:5,10,6,7 chr2 179648808 . G . PASS END=179648814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179648815 . C . PASS END=179648816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 179648817 . G . PASS END=179648818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179648819 . A . PASS END=179648819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:27,0 chr2 179648820 . C . PASS END=179648826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,995:0,87,255:29,0 chr2 179648827 . G . PASS END=179648827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 179648828 . C . PASS END=179648844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:29:0,87,1042:0,87,255:36,0 chr2 179648845 . G . PASS END=179648925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1225:0,86,255:36,0 chr2 179648926 . G . PASS END=179648926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:31,0 chr2 179648927 . G . PASS END=179648939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 179648940 . A . PASS END=179648941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 179648942 . G . PASS END=179649026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1157:0,86,255:33,0 chr2 179649027 . T . PASS END=179649027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 179649028 . G . PASS END=179649045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 179649046 . T . PASS END=179649077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,869:0,62,255:26,0 chr2 179649078 . C . PASS END=179649078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 179649083 . A . PASS END=179649083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 179650347 . C . PASS END=179650470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:41:0,106,1527:0,106,255:40,0 chr2 179650472 . G . PASS END=179650472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 179650566 . T . PASS END=179650566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 179650570 . C . PASS END=179650570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 179650573 . A . PASS END=179650573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 179650575 . C . PASS END=179650663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:44:0,108,1714:0,108,255:40,0 chr2 179650664 . G . PASS END=179650700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,147,255:40,0 chr2 179650701 . C T, 50.00 PASS DP=60;MQ=250.00;MQRankSum=6.646;ReadPosRankSum=3.792;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,30,0:0.500,0.000:60:12,20,0:18,10,0:48:85,0,50,1073,1073,2146:255,0,255:27,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,15,15:14,16,21,9 chr2 179650702 . T . PASS END=179650738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,145,255:40,0 chr2 179650739 . C . PASS END=179650791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:41:0,80,1485:0,80,255:40,0 chr2 179650792 . C . PASS END=179650792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1418:0,65,255:34,0 chr2 179650793 . T . PASS END=179650808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,84,255:36,0 chr2 179650809 . G . PASS END=179650819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:28:0,72,1080:0,77,255:26,0 chr2 179650820 . C . PASS END=179650820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179650821 . T . PASS END=179650824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1100:0,74,255:27,0 chr2 179650825 . G . PASS END=179650825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:23,0 chr2 179650826 . C . PASS END=179650843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,878:0,61,255:25,0 chr2 179650844 . C . PASS END=179650844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 179650845 . T . PASS END=179650845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179650846 . T . PASS END=179650847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,776:0,52,255:19,0 chr2 179650848 . A . PASS END=179650848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 179650849 . G . PASS END=179650849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,745:0,22,255:18,0 chr2 179650850 . C . PASS END=179650850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 179650851 . C . PASS END=179650856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,805:0,66,255:22,0 chr2 179650857 . T . PASS END=179650858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 179650859 . C . PASS END=179650859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 179650860 . A . PASS END=179650860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 179650861 . A . PASS END=179650864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 179650865 . C . PASS END=179650868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr2 179654087 . C . PASS END=179654098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1321:0,111,255:38,0 chr2 179654099 . A . PASS END=179654099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1261:0,65,255:33,0 chr2 179654100 . A . PASS END=179654224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:86:38:0,86,1305:0,86,255:40,0 chr2 179654704 . C . PASS END=179654842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:62:0,120,1800:0,165,255:40,0 chr2 179655434 . C . PASS END=179655572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:51:0,120,1800:0,132,255:40,0 chr2 179656794 . C . PASS END=179656794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,247,255:40,0 chr2 179656799 . T . PASS END=179656924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:66:0,120,1800:0,160,255:40,0 chr2 179658128 . C . PASS END=179658128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1266:0,91,255:34,0 chr2 179658130 . C . PASS END=179658271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:83:37:0,83,1358:0,83,255:40,0 chr2 179659117 . C . PASS END=179659117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 179659121 . C . PASS END=179659121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 179659122 . G . PASS END=179659122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 179659126 . C . PASS END=179659127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 179659128 . G . PASS END=179659130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 179659131 . C . PASS END=179659138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 179659139 . G . PASS END=179659167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,815:0,69,255:25,0 chr2 179659168 . C . PASS END=179659175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 179659176 . C . PASS END=179659177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179659178 . G . PASS END=179659179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179659180 . C . PASS END=179659180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 179659181 . T . PASS END=179659234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1044:0,82,255:34,0 chr2 179659235 . A . PASS END=179659242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:29:0,71,1039:0,71,255:26,0 chr2 179659243 . C . PASS END=179659247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179659248 . C . PASS END=179659269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,1000:0,68,255:26,0 chr2 179659270 . T . PASS END=179659270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 179659271 . T . PASS END=179659276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 179659277 . A . PASS END=179659277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 179659278 . C . PASS END=179659278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 179659283 . A . PASS END=179659283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 179659646 . T . PASS END=179659646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 179659649 . C . PASS END=179659650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 179659651 . C . PASS END=179659651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 179659652 . T . PASS END=179659652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr2 179659653 . T . PASS END=179659667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 179659668 . A . PASS END=179659668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 179659669 . C . PASS END=179659673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 179659674 . T . PASS END=179659674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 179659675 . C . PASS END=179659685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:19,0 chr2 179659686 . C . PASS END=179659686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 179659687 . T . PASS END=179659688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 179659689 . G . PASS END=179659691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 179659692 . C . PASS END=179659692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr2 179659693 . T . PASS END=179659693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 179659694 . G . PASS END=179659695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,798:0,50,255:19,0 chr2 179659696 . C . PASS END=179659723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 179659724 . A . PASS END=179659724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 179659725 . C . PASS END=179659745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:26,0 chr2 179659746 . T . PASS END=179659754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr2 179659755 . T . PASS END=179659755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 179659756 . A . PASS END=179659758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 179659759 . T . PASS END=179659759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 179659760 . C . PASS END=179659768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:29,0 chr2 179659769 . T . PASS END=179659769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 179659770 . C . PASS END=179659774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 179659775 . T . PASS END=179659778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179659779 . G . PASS END=179659809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1350:0,93,255:32,0 chr2 179659810 . T . PASS END=179659810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1084:0,66,255:30,0 chr2 179659811 . C . PASS END=179659828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:33,0 chr2 179659829 . A . PASS END=179659829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 179659830 . G . PASS END=179659838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr2 179659839 . G . PASS END=179659839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179659840 . C . PASS END=179659866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1094:0,87,255:31,0 chr2 179659867 . G . PASS END=179659867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 179659868 . A . PASS END=179659946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1141:0,83,255:38,0 chr2 179659947 . G . PASS END=179659947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:33,0 chr2 179659948 . A . PASS END=179659965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1095:0,83,255:32,0 chr2 179659966 . C . PASS END=179659966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 179659967 . T . PASS END=179659968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 179659969 . G . PASS END=179659979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:26,0 chr2 179659982 . G . PASS END=179659982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 179664214 . C . PASS END=179664223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:18,0 chr2 179664224 . A . PASS END=179664224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr2 179664225 . T . PASS END=179664225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 179664226 . G . PASS END=179664226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 179664227 . G . PASS END=179664229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 179664230 . T . PASS END=179664230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 179664231 . C . PASS END=179664256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,629:0,51,255:19,0 chr2 179664257 . A . PASS END=179664257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr2 179664258 . A . PASS END=179664258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 179664259 . G . PASS END=179664271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,800:0,63,255:22,0 chr2 179664272 . T . PASS END=179664272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 179664273 . G . PASS END=179664275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 179664276 . C . PASS END=179664276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 179664277 . G . PASS END=179664291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,818:0,62,255:26,0 chr2 179664292 . C . PASS END=179664306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr2 179664307 . T . PASS END=179664307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:28,0 chr2 179664308 . T . PASS END=179664322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1185:0,80,255:36,0 chr2 179664323 . G . PASS END=179664323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1425:0,68,255:37,0 chr2 179664324 . T . PASS END=179664460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:41:0,84,1443:0,84,255:40,0 chr2 179664551 . C . PASS END=179664637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,119,1800:0,119,255:40,0 chr2 179665116 . A . PASS END=179665116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 179665117 . C . PASS END=179665117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,844:0,28,255:20,0 chr2 179665118 . G . PASS END=179665118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 179665122 . C . PASS END=179665126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,892:0,61,255:25,0 chr2 179665127 . A . PASS END=179665127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,744:0,44,255:24,0 chr2 179665128 . C . PASS END=179665131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr2 179665132 . T . PASS END=179665132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,859:0,45,255:24,0 chr2 179665133 . A . PASS END=179665133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,897:0,78,255:26,0 chr2 179665134 . A . PASS END=179665134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 179665135 . T . PASS END=179665135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 179665136 . T . PASS END=179665136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 179665137 . C . PASS END=179665137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 179665138 . A . PASS END=179665138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 179665139 . G . PASS END=179665139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr2 179665140 . C . PASS END=179665141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr2 179665142 . G . PASS END=179665142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 179665143 . T . PASS END=179665176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1089:0,82,255:34,0 chr2 179665177 . T . PASS END=179665177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1195:0,74,255:33,0 chr2 179665178 . A . PASS END=179665332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1213:0,84,255:40,0 chr2 179665333 . T . PASS END=179665333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:53:41:0,53,1299:0,53,255:35,0 chr2 179665334 . T . PASS END=179665360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,84,255:36,0 chr2 179665361 . A . PASS END=179665385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr2 179665386 . C . PASS END=179665398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:19:0,48,720:0,57,255:19,0 chr2 179665399 . T . PASS END=179665409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:11,0 chr2 179665423 . A . PASS END=179665423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 179666860 . C . PASS END=179666860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 179666865 . C . PASS END=179666884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,747:0,69,255:25,0 chr2 179666885 . G . PASS END=179666889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1141:0,87,255:31,0 chr2 179666890 . A . PASS END=179666890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 179666891 . G . PASS END=179667031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1083:0,83,255:40,0 chr2 179667032 . C . PASS END=179667052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,945:0,68,255:26,0 chr2 179667053 . T . PASS END=179667063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:21,0 chr2 179667064 . A . PASS END=179667068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr2 179669279 . C . PASS END=179669287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1192:0,92,255:36,0 chr2 179669288 . G . PASS END=179669297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1282:0,94,255:37,0 chr2 179669298 . G . PASS END=179669298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:37,0 chr2 179669299 . G . PASS END=179669369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:38:0,97,1316:0,97,255:40,0 chr2 179669373 . T . PASS END=179669373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 179671963 . A . PASS END=179671963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,821:0,69,255:23,0 chr2 179672001 . T . PASS END=179672001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:23,0 chr2 179672043 . C . PASS END=179672043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:18,0 chr2 179672142 . C . PASS END=179672142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 179672150 . C . PASS END=179672150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 179695485 . T . PASS END=179695522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,179,255:40,0 chr2 179698900 . T . PASS END=179698901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,878:0,61,255:25,0 chr2 179698902 . A . PASS END=179698902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179698903 . T . PASS END=179698905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1047:0,71,255:26,0 chr2 179698906 . T . PASS END=179698911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 179698912 . G . PASS END=179698912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 179698913 . A . PASS END=179698915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:30,0 chr2 179698916 . C . PASS END=179698916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 179698917 . A . PASS END=179698932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1156:0,85,255:34,0 chr2 179698933 . A . PASS END=179698933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1257:0,74,255:33,0 chr2 179698934 . C . PASS END=179699023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:35:0,81,1227:0,81,255:40,0 chr2 179699024 . A . PASS END=179699024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:43:46:0,43,1263:0,43,255:38,0 chr2 179699025 . G . PASS END=179699050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,105,1511:0,110,255:40,0 chr2 179699051 . G . PASS END=179699051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1346:0,73,255:36,0 chr2 179699052 . C . PASS END=179699130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1146:0,83,255:36,0 chr2 179699131 . G . PASS END=179699131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr2 179699132 . T . PASS END=179699150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 179699151 . T . PASS END=179699151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,968:0,57,255:25,0 chr2 179699152 . C . PASS END=179699167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,963:0,67,255:26,0 chr2 179699596 . T . PASS END=179699730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,114,1710:0,125,255:40,0 chr2 179701606 . T . PASS END=179701763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1141:0,84,255:40,0 chr2 179701764 . G . PASS END=179701774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:32:0,78,1170:0,86,255:26,0 chr2 179701775 . C . PASS END=179702127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1149:0,80,255:40,0 chr2 179702128 . G . PASS END=179702128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1344:0,78,255:36,0 chr2 179702129 . C . PASS END=179702131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:37,0 chr2 179702132 . A . PASS END=179702132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:35,0 chr2 179702133 . G . PASS END=179702213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1156:0,83,255:38,0 chr2 179702214 . A . PASS END=179702214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1053:0,46,255:25,0 chr2 179702215 . A . PASS END=179702223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179702224 . G . PASS END=179702226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:25,0 chr2 179702227 . G . PASS END=179702230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179702231 . T . PASS END=179702234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179702235 . A . PASS END=179702235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:27,0 chr2 179702236 . G . PASS END=179702239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr2 179702240 . C . PASS END=179702240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 179702241 . T . PASS END=179702241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 179702242 . T . PASS END=179702242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr2 179702243 . C . PASS END=179702259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:31,0 chr2 179702260 . G . PASS END=179702260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 179702261 . G . PASS END=179702267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:37:0,96,1410:0,98,255:36,0 chr2 179702268 . A G, 161.36 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,20,0:0,18,0:111:199,114,0,1452,114,1452:255,114,0:0,0:1.6136e+02,1.1136e+02,0.0000e+00,4.5000e+02,1.4613e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,19:0,0,19,19 chr2 179702269 . G . PASS END=179702305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1205:0,92,255:33,0 chr2 179702306 . T . PASS END=179702312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:30,0 chr2 179702313 . A . PASS END=179702313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 179702314 . G . PASS END=179702321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 179702322 . A . PASS END=179702324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 179702325 . C . PASS END=179702334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 179702335 . T . PASS END=179702336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179702337 . C . PASS END=179702340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179702341 . G . PASS END=179702342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 179702343 . G . PASS END=179702346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 179702347 . A . PASS END=179702349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 179702350 . T . PASS END=179702352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 179702353 . T . PASS END=179702356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179702357 . G . PASS END=179702357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179702358 . C . PASS END=179702359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179702360 . G . PASS END=179702388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1125:0,84,255:30,0 chr2 179702389 . T . PASS END=179702389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179702390 . C . PASS END=179702390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 179702391 . A . PASS END=179702392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1108:0,74,255:27,0 chr2 179702393 . T . PASS END=179702400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 179702401 . T . PASS END=179702461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,908:0,61,255:26,0 chr2 179702462 . G . PASS END=179702462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,923:0,42,255:19,0 chr2 179702463 . C . PASS END=179702469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:20,0 chr2 179702470 . C . PASS END=179702471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 179710353 . C . PASS END=179710469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:79:0,120,1800:0,194,255:40,0 chr2 179714776 . C . PASS END=179714888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,120,1800:0,124,255:40,0 chr2 179718168 . C . PASS END=179718351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:42:0,120,1800:0,125,255:40,0 chr2 179720074 . C . PASS END=179720268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,99,1485:0,119,255:40,0 chr2 179720984 . C . PASS END=179721124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:75:0,120,1800:0,211,255:40,0 chr2 179730494 . C . PASS END=179730495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 179730496 . C . PASS END=179730503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1157:0,90,255:31,0 chr2 179730504 . T . PASS END=179730504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 179730505 . C . PASS END=179730506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr2 179730507 . T . PASS END=179730507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1056:0,65,255:31,0 chr2 179730508 . C . PASS END=179730614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:32:0,86,1038:0,86,255:40,0 chr2 179730615 . A . PASS END=179730615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:30,0 chr2 179730616 . G . PASS END=179730628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1202:0,93,255:31,0 chr2 179730629 . A . PASS END=179730638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr2 179730639 . C . PASS END=179730643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr2 179732753 . A . PASS END=179732760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,909:0,72,255:25,0 chr2 179732761 . G . PASS END=179732766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr2 179732767 . A . PASS END=179732767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 179732768 . T . PASS END=179732776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 179732777 . G . PASS END=179732777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:28,0 chr2 179732778 . T . PASS END=179732782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1041:0,87,255:30,0 chr2 179732783 . T . PASS END=179732783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:28,0 chr2 179732784 . C . PASS END=179732784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 179732785 . C . PASS END=179732809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:30:0,83,1101:0,83,255:34,0 chr2 179732810 . A . PASS END=179732810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:31,0 chr2 179732811 . T . PASS END=179732881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1153:0,80,255:37,0 chr2 179732882 . C . PASS END=179732882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:27,0 chr2 179732883 . T . PASS END=179732887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 179732888 . C . PASS END=179732908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:25,0 chr2 179732909 . T . PASS END=179732909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,726:0,55,255:21,0 chr2 179732910 . C . PASS END=179732920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 179732921 . G . PASS END=179732932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,52,255:19,0 chr2 179733844 . C . PASS END=179734032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:28:0,81,1055:0,81,255:40,0 chr2 179736154 . C . PASS END=179736279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:98:38:0,98,1357:0,98,255:40,0 chr2 179736860 . C . PASS END=179736863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:28,0 chr2 179736864 . T . PASS END=179736864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 179736865 . T . PASS END=179736867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 179736868 . G . PASS END=179736868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr2 179736869 . T . PASS END=179737024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:28:0,81,1133:0,84,255:40,0 chr2 179737025 . C . PASS END=179737039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,87,255:26,0 chr2 179742631 . T . PASS END=179742870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:82:33:0,82,1141:0,82,255:40,0 chr2 179749628 . C . PASS END=179749642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,113,1558:0,113,255:40,0 chr2 179749643 . C . PASS END=179749679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,114,1631:0,114,255:40,0 chr2 179749680 . T C, 49.58 PASS DP=58;MQ=250.00;MQRankSum=6.516;ReadPosRankSum=3.523;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,27,0:0.466,0.000:58:20,11,0:11,16,0:48:84,0,50,921,1070,1991:255,0,255:27,0:4.9581e+01,6.9634e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,10,14,13:18,13,18,9 chr2 179749681 . A . PASS END=179749717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,161,255:40,0 chr2 179749718 . T . PASS END=179749819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:96:41:0,96,1440:0,112,255:40,0 chr2 179751479 . C . PASS END=179751598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:56:0,120,1800:0,149,255:40,0 chr2 179753254 . C . PASS END=179753257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 179753258 . C . PASS END=179753263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,743:0,60,255:22,0 chr2 179753264 . T . PASS END=179753264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr2 179753265 . A . PASS END=179753278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,799:0,66,255:26,0 chr2 179753279 . G . PASS END=179753279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 179753280 . C . PASS END=179753282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179753283 . T . PASS END=179753284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179753285 . A . PASS END=179753285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,921:0,54,255:25,0 chr2 179753286 . G . PASS END=179753289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 179753290 . T . PASS END=179753390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:28:0,81,1019:0,84,255:40,0 chr2 179753391 . G . PASS END=179753395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:34:0,75,1125:0,102,255:25,0 chr2 179770056 . C . PASS END=179770228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:87:30:0,87,1305:0,90,255:40,0 chr2 179783440 . C . PASS END=179783440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:26,0 chr2 179783441 . T . PASS END=179783441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 179783442 . T . PASS END=179783632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:33:0,81,1215:0,83,255:40,0 chr2 179783633 . T . PASS END=179783633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 179783634 . C . PASS END=179783634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 179809262 . C . PASS END=179809378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:99:54:0,120,1800:0,137,255:40,0 chr2 179825957 . C . PASS END=179825972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1057:0,87,255:32,0 chr2 179825973 . T . PASS END=179825973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 179825974 . C . PASS END=179826179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:29:0,81,1215:0,86,255:40,0 chr2 179826180 . T . PASS END=179826181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:26,0 chr2 179826182 . T . PASS END=179826182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179826183 . A . PASS END=179826184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 179826185 . A . PASS END=179826186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 179826187 . G . PASS END=179826203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:25,0 chr2 179826204 . A . PASS END=179826207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 179826208 . G . PASS END=179826209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:47:21:0,47,721:0,47,255:19,0 chr2 179826210 . T . PASS END=179826210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 179839784 . C . PASS END=179839892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,151,255:40,0 chr2 179843211 . C . PASS END=179843216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 179843217 . G . PASS END=179843227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 179843228 . A . PASS END=179843402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:27:0,80,994:0,80,255:40,0 chr2 179912011 . C . PASS END=179912133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:44:0,116,1635:0,116,255:40,0 chr2 179914567 . C . PASS END=179914668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,133,255:40,0 chr2 179974626 . T . PASS END=179974747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:37:0,102,1530:0,110,255:40,0 chr2 179974748 . G . PASS END=179974748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:31,0 chr2 179974749 . T . PASS END=179974755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1189:0,91,255:33,0 chr2 179977451 . C . PASS END=179977572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:55:0,120,1800:0,137,255:40,0 chr2 179979792 . C . PASS END=179979793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr2 179979794 . T . PASS END=179979810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:30,0 chr2 179979811 . A . PASS END=179979811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 179979812 . A . PASS END=179979892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:30:0,83,1147:0,83,255:40,0 chr2 179979893 . G . PASS END=179979929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,117,1782:0,117,255:40,0 chr2 179979930 . T C, 185.45 PASS DP=46;MQ=249.19;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,26,0:0,20,0:135:223,138,0,1783,138,1783:255,138,0:0,0:1.8545e+02,1.3545e+02,0.0000e+00,4.5000e+02,1.7022e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,26:0,0,28,18 chr2 179979931 . T . PASS END=179979967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:34:0,89,1302:0,89,255:40,0 chr2 179979968 . C . PASS END=179979968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 179979969 . A . PASS END=179979974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:34:0,60,900:0,86,255:22,0 chr2 179979975 . A . PASS END=179979983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:48:21:0,48,720:0,63,255:19,0 chr2 179981347 . C . PASS END=179981517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:45:0,117,1668:0,117,255:40,0 chr2 179982259 . C . PASS END=179982340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:60:0,120,1800:0,173,255:40,0 chr2 179986497 . C . PASS END=179986515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,108,1443:0,114,255:40,0 chr2 179986516 . T . PASS END=179986552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,120,1800:0,121,255:40,0 chr2 179986553 . T C, 36.61 PASS DP=59;MQ=250.00;MQRankSum=6.066;ReadPosRankSum=4.848;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:41,18,0:0.305,0.000:59:20,12,0:21,6,0:37:71,0,50,644,1430,2074:255,0,255:40,0:3.6615e+01,9.6876e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,20,10,8:20,21,8,10 chr2 179986554 . T . PASS END=179986590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:59:0,120,1800:0,139,255:40,0 chr2 179986591 . A . PASS END=179986656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:41:0,110,1557:0,110,255:40,0 chr2 179988442 . C . PASS END=179988457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:97:47:0,97,1557:0,97,255:40,0 chr2 179988458 . C . PASS END=179988458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1600:0,75,255:40,0 chr2 179988459 . T . PASS END=179988556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:88:38:0,88,1305:0,88,255:40,0 chr2 179989091 . A . PASS END=179989095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1225:0,99,255:33,0 chr2 179989096 . G . PASS END=179989096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:37,0 chr2 179989097 . G . PASS END=179989285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:38:0,107,1496:0,107,255:40,0 chr2 179997031 . A . PASS END=179997031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 179997032 . C . PASS END=179997032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 179997033 . T . PASS END=179997033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 179997034 . G . PASS END=179997047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1157:0,93,255:31,0 chr2 179997048 . T . PASS END=179997048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:29,0 chr2 179997049 . C . PASS END=179997049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 179997050 . T . PASS END=179997050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:29,0 chr2 179997051 . C . PASS END=179997051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 179997052 . T . PASS END=179997052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,954:0,57,255:28,0 chr2 179997053 . T . PASS END=179997066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1141:0,90,255:32,0 chr2 179997067 . T . PASS END=179997067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr2 179997068 . A . PASS END=179997130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1143:0,80,255:34,0 chr2 179997131 . G . PASS END=179997132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 179997133 . C . PASS END=179997140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:22,0 chr2 179997141 . G . PASS END=179997149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,56,255:19,0 chr2 179997150 . C . PASS END=179997153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:33:24:0,33,495:0,72,255:11,0 chr2 180008319 . C . PASS END=180008520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:33:0,84,1260:0,92,255:40,0 chr2 180008521 . A . PASS END=180008530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:29:0,69,1035:0,87,255:24,0 chr2 180011129 . C . PASS END=180011186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:49:0,120,1800:0,147,255:40,0 chr2 180014024 . C . PASS END=180014121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:70:0,120,1800:0,174,255:40,0 chr2 180016005 . C . PASS END=180016118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,102,1559:0,102,255:40,0 chr2 180036847 . C . PASS END=180036960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:84:38:0,84,1260:0,97,255:40,0 chr2 180039159 . T . PASS END=180039185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:96:40:0,96,1421:0,96,255:40,0 chr2 180041175 . C . PASS END=180041265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,108,1723:0,108,255:40,0 chr2 180047807 . C . PASS END=180047870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:87:39:0,87,1362:0,87,255:40,0 chr2 180047871 . A . PASS END=180047907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,114,1710:0,118,255:40,0 chr2 180047908 . T C, 197.02 PASS DP=50;MQ=249.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,24,0:0,26,0:147:235,150,0,1882,150,1882:255,150,0:0,0:1.9702e+02,1.4702e+02,0.0000e+00,4.5000e+02,1.8179e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,29:0,0,29,21 chr2 180047909 . T . PASS END=180047915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,108,1620:0,126,255:38,0 chr2 180056514 . C . PASS END=180056568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,111,1665:0,140,255:40,0 chr2 180307977 . T . PASS END=180307991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,799:0,62,255:26,0 chr2 180307992 . G . PASS END=180307994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr2 180307995 . G . PASS END=180307995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 180307996 . A . PASS END=180308131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:28:0,84,1039:0,84,255:40,0 chr2 180308132 . G . PASS END=180308158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr2 180308159 . A . PASS END=180308172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:18:0,42,630:0,54,255:18,0 chr2 180308173 . T . PASS END=180308191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 180308192 . T . PASS END=180308195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:24:14:0,24,360:0,42,255:8,0 chr2 180309603 . T . PASS END=180309704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,108,1659:0,108,255:40,0 chr2 180310277 . C . PASS END=180310455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:37:0,80,1298:0,80,255:40,0 chr2 180311252 . C . PASS END=180311497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:29:0,84,1094:0,87,255:40,0 chr2 180330630 . C . PASS END=180330710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:59:0,120,1800:0,142,255:40,0 chr2 180345687 . T . PASS END=180345871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:87:31:0,87,1305:0,93,255:40,0 chr2 180345872 . T . PASS END=180345873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 180345874 . T . PASS END=180345883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1133:0,80,255:29,0 chr2 180347999 . C . PASS END=180348017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1186:0,83,255:37,0 chr2 180348018 . G . PASS END=180348018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr2 180348019 . C . PASS END=180348138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,92,255:40,0 chr2 180348139 . T . PASS END=180348156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:25,0 chr2 180348157 . T . PASS END=180348161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:19,0 chr2 180383255 . A . PASS END=180383365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:47:0,114,1710:0,141,255:40,0 chr2 180387609 . C . PASS END=180387647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:84:0,120,1800:0,179,255:40,0 chr2 180409554 . T . PASS END=180409696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:30:0,81,1184:0,81,255:40,0 chr2 180448702 . C . PASS END=180448708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:72:0,120,1800:0,199,255:40,0 chr2 180524804 . C . PASS END=180524813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:109:0,120,1800:0,255,255:40,0 chr2 180610440 . C . PASS END=180610577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,115,1800:0,115,255:40,0 chr2 180634230 . C . PASS END=180634234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 180634235 . C A, 49.86 PASS DP=15;MQ=250.00;MQRankSum=3.183;ReadPosRankSum=1.678;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,7,0:0.467,0.000:15:3,2,0:5,5,0:47:85,0,47,250,262,512:226,0,241:8,0:4.9856e+01,8.8272e-05,4.9990e+01,2.5035e+02,2.9682e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,0,6,1:3,5,1,6 chr2 180634236 . T . PASS END=180634254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:17,0 chr2 180634255 . G . PASS END=180634256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 180634257 . C . PASS END=180634257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 180634258 . C . PASS END=180634272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,767:0,60,255:25,0 chr2 180634273 . G . PASS END=180634277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:26,0 chr2 180634278 . G . PASS END=180634527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:27:0,81,1000:0,81,255:40,0 chr2 180809856 . T . PASS END=180809872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1033:0,87,255:29,0 chr2 180809873 . G . PASS END=180809874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1003:0,71,255:29,0 chr2 180809875 . G . PASS END=180810097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:30:0,82,959:0,82,255:40,1 chr2 180810098 . A . PASS END=180810098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,10:68:23:68:0,23,1536:0,23,255:40,0 chr2 180810099 . A . PASS END=180810099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,8:68:71:68:0,71,1833:0,71,255:40,0 chr2 180810100 . T . PASS END=180810105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,6:70:95:70:0,95,1800:0,95,255:40,0 chr2 180810106 . C . PASS END=180810106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,9:71:63:71:0,63,1853:0,63,255:40,0 chr2 180810107 . T . PASS END=180810142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,2:74:99:70:0,120,1800:0,124,255:40,0 chr2 180810143 . T . PASS END=180810179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,169,255:40,0 chr2 180810180 . C T, 48.67 PASS DP=71;MQ=249.45;MQRankSum=7.182;ReadPosRankSum=0.052;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,31,0:0.437,0.000:71:18,13,0:22,18,0:47:83,0,50,1066,1385,2450:255,0,255:38,0:4.8673e+01,8.0765e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,26,15,16:22,18,15,16 chr2 180810181 . G . PASS END=180810263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,128,255:40,0 chr2 180810264 . A T, 252.34 PASS DP=70;MQ=249.44;FractionInformativeReads=0.986 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,69,0:1.000,0.000:69:0,32,0:0,37,0:202:290,205,0,2472,205,2472:255,207,0:0,0:2.5234e+02,2.0234e+02,0.0000e+00,4.5000e+02,2.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,42,27:0,0,33,36 chr2 180810265 . C . PASS END=180810294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:90:68:0,90,1800:0,90,255:40,0 chr2 180810295 . C . PASS END=180810295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,10:80:73:80:0,73,2144:0,73,255:40,0 chr2 180810296 . T . PASS END=180810301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:81:0,120,1800:0,243,255:40,0 chr2 180810302 . C . PASS END=180810323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:81:0,120,1800:0,215,255:40,0 chr2 180810324 . G . PASS END=180810360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:88:0,120,1800:0,232,255:40,0 chr2 180810361 . T A, 50.00 PASS DP=93;MQ=249.64;MQRankSum=7.953;ReadPosRankSum=5.424;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,48,0:0.516,0.000:93:26,21,0:19,27,0:48:85,0,50,1708,1549,3258:255,0,255:40,0:5.0000e+01,6.5751e-05,5.2882e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,23,24,24:25,20,27,21 chr2 180810362 . C . PASS END=180810398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:90:0,120,1800:0,244,255:40,0 chr2 180810399 . T . PASS END=180810442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,111,1665:0,161,255:40,0 chr2 180815239 . C . PASS END=180815247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,568:0,41,255:18,0 chr2 180815248 . A . PASS END=180815248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,673:0,30,255:17,0 chr2 180815249 . G . PASS END=180815255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,743:0,47,255:19,0 chr2 180815256 . C . PASS END=180815258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 180815259 . C . PASS END=180815259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 180815260 . T . PASS END=180815267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr2 180815268 . G . PASS END=180815273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,993:0,81,255:28,0 chr2 180815274 . T . PASS END=180815274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 180815275 . C . PASS END=180815279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 180815280 . T . PASS END=180815280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:27,0 chr2 180815281 . C . PASS END=180815283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 180815284 . C . PASS END=180815284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:29,0 chr2 180815285 . A . PASS END=180815325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:32:0,90,1329:0,96,255:40,0 chr2 180815326 . A . PASS END=180815326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1357:0,76,255:37,0 chr2 180815327 . G . PASS END=180815459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:40:0,96,1440:0,98,255:40,0 chr2 180815552 . G . PASS END=180815565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:51:0,120,1800:0,123,255:40,0 chr2 180815566 . A . PASS END=180815653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:49:0,120,1800:0,147,255:40,0 chr2 180817198 . T . PASS END=180817325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:35:0,90,1327:0,105,255:40,0 chr2 180818932 . A . PASS END=180819084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:40:0,99,1485:0,113,255:40,0 chr2 180819684 . C . PASS END=180819761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,110,1562:0,110,255:40,0 chr2 180823749 . T . PASS END=180823809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:114:0,120,1800:0,255,255:40,0 chr2 180829274 . C . PASS END=180829344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:90:0,120,1800:0,179,255:40,0 chr2 180829345 . T . PASS END=180829355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:83:0,120,1800:0,249,255:40,0 chr2 180830605 . C . PASS END=180830709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:86:34:0,86,1210:0,86,255:40,0 chr2 180835228 . C . PASS END=180835246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:79:0,120,1800:0,202,255:40,0 chr2 180835247 . C . PASS END=180835247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,14:101:69:101:0,69,2365:0,69,255:40,0 chr2 180835248 . T . PASS END=180835290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,1:107:99:101:0,120,1800:0,157,255:40,0 chr2 180835377 . T . PASS END=180835417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,155,255:40,0 chr2 180835418 . A . PASS END=180835551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,141,255:40,0 chr2 180835552 . A . PASS END=180835583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,131,255:40,0 chr2 180835668 . C . PASS END=180835754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:50:0,120,1800:0,137,255:40,0 chr2 180835755 . G . PASS END=180835791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:44:0,105,1575:0,116,255:40,0 chr2 180835792 . T A, 168.99 PASS DP=44;MQ=250.00;MQRankSum=1.654;ReadPosRankSum=1.654;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,43,0:0.977,0.000:44:0,23,0:1,20,0:119:207,122,0,1599,129,1606:255,116,0:0,0:1.6899e+02,1.1899e+02,0.0000e+00,4.5000e+02,1.6072e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,20,23:1,0,22,21 chr2 180835793 . A . PASS END=180835803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,102,1530:0,120,255:39,0 chr2 180837920 . C . PASS END=180837973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:79:0,120,1800:0,205,255:40,0 chr2 180838361 . C . PASS END=180838518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:87:40:0,87,1305:0,116,255:40,1 chr2 180838519 . A . PASS END=180838529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:29:0,63,945:0,87,255:25,0 chr2 180842917 . C . PASS END=180843045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:48:0,106,1767:0,106,255:40,0 chr2 180846479 . C . PASS END=180846487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,729:0,57,255:19,0 chr2 180846488 . T . PASS END=180846492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 180846493 . A . PASS END=180846493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 180846494 . A . PASS END=180846516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr2 180846517 . C . PASS END=180846684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:28:0,81,867:0,83,255:40,0 chr2 180846685 . A . PASS END=180846705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:27:0,72,1080:0,77,255:25,0 chr2 180846706 . T . PASS END=180846709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,990:0,65,255:24,0 chr2 180846710 . T . PASS END=180846710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,791:0,45,255:21,0 chr2 180846711 . C . PASS END=180846724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 180851422 . C . PASS END=180851532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:49:0,120,1800:0,129,255:40,1 chr2 180853304 . C . PASS END=180853371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:46:0,95,1691:0,95,255:40,0 chr2 180858042 . T . PASS END=180858068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:85:0,120,1800:0,219,255:40,0 chr2 181846770 . A . PASS END=181846776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr2 181846777 . G . PASS END=181846777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr2 181846778 . T . PASS END=181846801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,574:0,41,255:19,0 chr2 181846802 . G . PASS END=181846824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,640:0,60,255:25,0 chr2 181846825 . G . PASS END=181846834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:29,0 chr2 181846835 . G . PASS END=181846835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 181846836 . G . PASS END=181846911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1109:0,80,255:35,0 chr2 181846912 . A . PASS END=181846913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1053:0,60,255:27,0 chr2 181846914 . A . PASS END=181846915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 181846916 . C . PASS END=181846916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 181846917 . A . PASS END=181846940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,936:0,87,255:29,0 chr2 181846941 . A . PASS END=181846942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:27,0 chr2 181846943 . G . PASS END=181846946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 181846947 . T . PASS END=181846963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr2 181848770 . A . PASS END=181848820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:76:0,120,1800:0,202,255:40,0 chr2 181852065 . A . PASS END=181852215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:40:0,104,1449:0,104,255:40,0 chr2 181854609 . G . PASS END=181854699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:44:0,109,1665:0,109,255:40,0 chr2 181908598 . T . PASS END=181908619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:102:0,120,1800:0,243,255:40,0 chr2 181922420 . T . PASS END=181922438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:33:0,96,1075:0,99,255:40,0 chr2 181922439 . A . PASS END=181922439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1443:0,79,255:40,0 chr2 181922440 . A . PASS END=181922552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:43:0,90,1499:0,90,255:40,0 chr2 181925392 . G . PASS END=181925396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr2 181925397 . T . PASS END=181925397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:31,0 chr2 181925398 . T . PASS END=181925508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:32:0,87,1150:0,87,255:40,0 chr2 181925509 . A . PASS END=181925509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1504:0,63,255:39,0 chr2 181925510 . T . PASS END=181925529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:40:0,87,1380:0,87,255:40,0 chr2 181925530 . T . PASS END=181925530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1219:0,67,255:30,0 chr2 181925531 . G . PASS END=181925534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:90:39:0,90,1350:0,100,255:31,0 chr2 181925535 . C . PASS END=181925536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:29,0 chr2 181925537 . C . PASS END=181925538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:34:0,85,1127:0,85,255:30,0 chr2 181925539 . G . LowGQ END=181925539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:0:37:0,0,1072:22,0,255:29,0 chr2 181927518 . C . PASS END=181927615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:95:45:0,95,1800:0,95,255:40,0 chr2 182322382 . A . PASS END=182322383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 182322384 . G . PASS END=182322387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,507:0,45,255:15,0 chr2 182322388 . T . PASS END=182322388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:14,0 chr2 182322389 . G . PASS END=182322391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:16,0 chr2 182322392 . A . PASS END=182322392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 182322393 . A . PASS END=182322397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:47:16:0,47,464:0,47,255:16,0 chr2 182322398 . G . PASS END=182322398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:15,0 chr2 182322399 . G . PASS END=182322404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,537:0,48,255:16,0 chr2 182322405 . A . PASS END=182322405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:15,0 chr2 182322406 . C . PASS END=182322407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 182322408 . C . PASS END=182322409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:15,0 chr2 182322410 . G . PASS END=182322410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,509:0,48,255:16,0 chr2 182322411 . C . PASS END=182322411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 182322412 . C . PASS END=182322415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,517:0,51,255:17,0 chr2 182322416 . G . PASS END=182322416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:16,0 chr2 182322417 . A . PASS END=182322417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 182322418 . A . PASS END=182322419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,507:0,34,255:17,0 chr2 182322420 . G . PASS END=182322422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,644:0,54,255:18,0 chr2 182322423 . C . PASS END=182322423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 182322424 . G . PASS END=182322426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,601:0,54,255:18,0 chr2 182322427 . G . PASS END=182322428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 182322429 . C . PASS END=182322432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 182322433 . G . PASS END=182322433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:18,0 chr2 182322434 . A . PASS END=182322436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:20:0,46,587:0,46,255:19,0 chr2 182322437 . C . PASS END=182322437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,635:0,16,255:18,0 chr2 182322438 . G . PASS END=182322438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 182322439 . G . PASS END=182322439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 182322440 . T . PASS END=182322440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,682:0,33,255:20,0 chr2 182322441 . G . PASS END=182322442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,770:0,66,255:22,0 chr2 182322443 . T . PASS END=182322444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr2 182322445 . C . PASS END=182322446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr2 182322447 . G . PASS END=182322447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,737:0,36,255:21,0 chr2 182322448 . T . PASS END=182322450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,823:0,69,255:23,0 chr2 182322451 . C . PASS END=182322451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:22,0 chr2 182322452 . T . PASS END=182322455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr2 182322456 . C . PASS END=182322456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,812:0,28,255:22,0 chr2 182322457 . C . PASS END=182322462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,856:0,61,255:25,0 chr2 182322463 . G . PASS END=182322465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 182322466 . C . PASS END=182322466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 182322467 . C . PASS END=182322473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 182322474 . C . PASS END=182322474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 182322475 . C . PASS END=182322497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:30:0,83,1180:0,83,255:34,0 chr2 182322498 . G . PASS END=182322498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:28,0 chr2 182322499 . A . PASS END=182322526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1169:0,80,255:31,0 chr2 182322527 . A . PASS END=182322527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 182322528 . C . PASS END=182322528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 182322529 . A . PASS END=182322531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:25,0 chr2 182322532 . C . PASS END=182322532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 182322533 . T . PASS END=182322533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:26,0 chr2 182322534 . G . PASS END=182322534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 182322535 . T . PASS END=182322536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 182322537 . C . PASS END=182322537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr2 182322538 . G . PASS END=182322539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 182322540 . C . PASS END=182322541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 182322542 . A . PASS END=182322559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:23:0,63,923:0,64,255:26,0 chr2 182322560 . G . PASS END=182322560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 182322561 . C . PASS END=182322562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 182322563 . A . PASS END=182322563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 182322564 . C . PASS END=182322570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 182322571 . A . PASS END=182322578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,623:0,43,255:19,0 chr2 182322923 . G . PASS END=182322923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 182322924 . C . PASS END=182322932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 182322933 . G . PASS END=182322933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 182322934 . G . PASS END=182322969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:29:0,82,1057:0,82,255:33,0 chr2 182322970 . T . PASS END=182322970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1135:0,68,255:31,0 chr2 182322971 . G . PASS END=182323030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1144:0,83,255:33,0 chr2 182323031 . A . PASS END=182323042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,1080:0,63,255:26,0 chr2 182323043 . G . PASS END=182323043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr2 182323044 . G . PASS END=182323044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 182339687 . G . PASS END=182339793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:42:0,89,1543:0,89,255:40,0 chr2 182339886 . A . PASS END=182340015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,114,1667:0,117,255:40,0 chr2 182340547 . G . PASS END=182340578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,155,255:40,0 chr2 182343484 . A . PASS END=182343551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:74:0,120,1800:0,188,255:40,0 chr2 182344864 . G . PASS END=182344889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:54:0,120,1800:0,129,255:40,0 chr2 182344890 . A . PASS END=182344993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,158,255:40,0 chr2 182346325 . G . PASS END=182346401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:35:0,84,1227:0,88,255:40,0 chr2 182346402 . A . PASS END=182346402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:27,0 chr2 182346403 . T . PASS END=182346410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1164:0,83,255:28,0 chr2 182347087 . G . PASS END=182347149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:49:0,120,1800:0,130,255:40,0 chr2 182347241 . C . PASS END=182347349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:96:34:0,96,1440:0,102,255:40,0 chr2 182347350 . G . PASS END=182347350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:30,0 chr2 182347351 . A . PASS END=182347354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr2 182347355 . T . PASS END=182347355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:54:35:0,54,811:0,54,255:30,0 chr2 182347356 . T . PASS END=182347370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,85,255:33,0 chr2 182347371 . C . PASS END=182347378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:29:0,60,900:0,87,255:25,0 chr2 182350608 . G . PASS END=182350705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:66:0,120,1800:0,188,255:40,0 chr2 182350706 . T . PASS END=182350719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,188,255:40,0 chr2 182358052 . A . PASS END=182358146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:56:0,120,1800:0,147,255:40,0 chr2 182359449 . A . PASS END=182359539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:48:0,114,1710:0,144,255:40,0 chr2 182360098 . A . PASS END=182360143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:93:0,120,1800:0,250,255:40,0 chr2 182360510 . G . PASS END=182360529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,102,1530:0,104,255:40,0 chr2 182360530 . T . PASS END=182360530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1446:0,69,255:40,0 chr2 182360531 . T . PASS END=182360664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:47:0,120,1800:0,140,255:40,0 chr2 182363350 . T . PASS END=182363356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,942:0,84,255:29,0 chr2 182363357 . T . PASS END=182363357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 182363358 . T . PASS END=182363368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1017:0,87,255:36,0 chr2 182363369 . T . PASS END=182363369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1083:0,74,255:34,0 chr2 182363370 . T . PASS END=182363500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1141:0,80,255:40,0 chr2 182363501 . G . PASS END=182363502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:30:0,72,1080:0,90,255:25,0 chr2 182363503 . G . PASS END=182363503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr2 182363504 . G . PASS END=182363504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 182374385 . A . PASS END=182374484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:29:0,87,1008:0,87,255:40,0 chr2 182374485 . T . PASS END=182374485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1355:0,73,255:36,0 chr2 182374486 . T . PASS END=182374496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1283:0,97,255:38,0 chr2 182374497 . T . PASS END=182374512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1186:0,83,255:33,0 chr2 182374513 . A . PASS END=182374513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 182374514 . A . PASS END=182374520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1078:0,84,255:28,0 chr2 182374521 . T . PASS END=182374521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:26,0 chr2 182374522 . A . PASS END=182374531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 182374532 . A . PASS END=182374532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,962:0,67,255:27,0 chr2 182374533 . C . PASS END=182374533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 182374534 . A G, 48.75 PASS DP=28;MQ=250.00;MQRankSum=4.433;ReadPosRankSum=1.277;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,12,0:0.429,0.000:28:9,8,0:7,4,0:47:84,0,50,429,572,1001:255,0,255:16,0:4.8752e+01,7.9730e-05,5.3000e+01,4.2914e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,7,5,7:4,12,7,5 chr2 182376426 . A . PASS END=182376502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:73:0,120,1800:0,194,255:40,0 chr2 182386918 . G . PASS END=182386924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:38,0 chr2 182386925 . G . PASS END=182386925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1332:0,70,255:34,0 chr2 182386926 . A . PASS END=182386934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:40:0,93,1465:0,93,255:40,0 chr2 182386935 . C . PASS END=182386935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:55:44:0,55,1496:0,55,255:40,0 chr2 182386936 . A . PASS END=182386936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 182386937 . T . PASS END=182386937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:46:44:0,46,1421:0,46,255:40,0 chr2 182386938 . A . PASS END=182386939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:45:0,108,1538:0,108,255:40,0 chr2 182386940 . C . PASS END=182386940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1413:0,74,255:40,0 chr2 182386941 . T . PASS END=182386943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:49:0,97,1605:0,97,255:40,0 chr2 182386944 . C . PASS END=182386944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:42:51:0,42,1468:0,42,255:40,0 chr2 182386945 . T . PASS END=182386951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:51:0,87,1621:0,87,255:40,0 chr2 182386952 . A . PASS END=182386952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:65:51:0,65,1643:0,65,255:40,0 chr2 182386953 . G . PASS END=182386953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,7:52:40:52:0,40,1538:0,40,255:40,0 chr2 182386954 . T . PASS END=182386956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:99:54:0,112,1776:0,112,255:40,0 chr2 182386957 . G . PASS END=182386957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:70:56:0,70,1603:0,70,255:40,0 chr2 182386958 . A . PASS END=182386961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:56:0,120,1800:0,134,255:40,0 chr2 182386962 . C . PASS END=182386962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:91:58:0,91,1703:0,91,255:40,0 chr2 182386963 . A . PASS END=182386963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,5:58:10:58:0,10,1568:0,10,255:40,0 chr2 182386964 . T . PASS END=182386965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr2 182386966 . G . PASS END=182386967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:52:59:0,52,1707:0,52,255:40,0 chr2 182386968 . T . PASS END=182386968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 182386969 . G . PASS END=182386969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:61:61:0,61,1734:0,61,255:40,0 chr2 182386970 . T . PASS END=182386971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,166,255:40,0 chr2 182386972 . G . PASS END=182386972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,7:62:33:62:0,33,1711:0,33,255:40,0 chr2 182386973 . A . PASS END=182386973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 182386974 . A . LowGQ END=182386974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,8:62:0:62:0,0,1731:19,0,255:40,0 chr2 182386975 . T . PASS END=182386980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:99:61:0,119,1800:0,119,255:40,0 chr2 182386981 . C . LowGQ END=182386981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,10:59:0:59:0,0,1547:17,0,255:40,0 chr2 182386982 . T . PASS END=182386986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:97:59:0,97,1800:0,97,255:40,0 chr2 182386987 . T . PASS END=182386987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,5:60:53:60:0,53,1816:0,53,255:40,0 chr2 182386988 . A . PASS END=182386991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:99:56:0,108,1800:0,108,255:40,0 chr2 182386992 . C . PASS END=182386992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,8:58:26:58:0,26,1448:0,26,255:40,0 chr2 182386993 . T . PASS END=182386996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:99:56:0,118,1684:0,118,255:40,0 chr2 182386997 . G . PASS END=182386997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,7:56:7:56:0,7,1531:0,7,255:40,0 chr2 182386998 . A . PASS END=182387003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:56:0,84,1407:0,84,255:40,0 chr2 182387004 . C . LowGQ END=182387004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,10:57:0:57:0,0,1380:9,0,255:40,0 chr2 182387005 . A . PASS END=182387008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,3:57:99:57:0,107,1743:0,107,255:40,0 chr2 182387009 . G . PASS END=182387009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,8:57:38:57:0,38,1440:0,38,255:40,0 chr2 182387010 . A . PASS END=182387010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 182387011 . A . PASS END=182387011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,9:58:10:58:0,10,1407:0,10,255:40,0 chr2 182387012 . A . PASS END=182387062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:51:0,109,1693:0,109,255:40,0 chr2 182387063 . G . PASS END=182387068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,120,1800:0,139,255:40,0 chr2 182388164 . G . PASS END=182388259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:48:0,120,1800:0,133,255:40,0 chr2 182388898 . A . PASS END=182388976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:31:0,84,1260:0,93,255:40,0 chr2 182388977 . G . PASS END=182388977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 182389929 . T . PASS END=182390018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,148,255:40,0 chr2 182392024 . G . PASS END=182392105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:47:0,101,1754:0,101,255:40,0 chr2 182392106 . A . PASS END=182392114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:57:0,120,1800:0,158,255:40,0 chr2 182394268 . G . PASS END=182394375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,2:77:99:60:0,120,1800:0,159,255:40,0 chr2 182395251 . A . PASS END=182395307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:32:0,88,1241:0,88,255:40,0 chr2 182395308 . C . PASS END=182395344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,117,1755:0,135,255:40,0 chr2 182395345 . G A, 49.74 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=4.088;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,21,0:0.477,0.000:44:9,13,0:14,8,0:48:85,0,50,669,823,1492:255,0,255:21,0:4.9744e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,8,13:10,13,8,13 chr2 182395346 . G . PASS END=182395364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,99,1485:0,110,255:40,0 chr2 182395365 . A . PASS END=182395365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1350:0,78,255:32,0 chr2 182395366 . A . PASS END=182395376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr2 182396384 . T . PASS END=182396503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:92:40:0,92,1466:0,92,255:40,0 chr2 182398999 . G . PASS END=182399059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:65:0,120,1800:0,191,255:40,0 chr2 182399060 . G . PASS END=182399096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:69:0,120,1800:0,191,255:40,0 chr2 182399097 . T C, 50.00 PASS DP=68;MQ=250.00;MQRankSum=7.071;ReadPosRankSum=3.717;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,36,0:0.529,0.000:68:16,13,0:16,23,0:48:85,0,50,1287,1057,2344:255,0,255:27,0:5.0000e+01,6.7304e-05,5.2614e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,14,11,25:18,14,22,14 chr2 182399543 . G . PASS END=182399600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,131,255:40,0 chr2 182399601 . T . PASS END=182399637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:89:40:0,89,1429:0,89,255:40,0 chr2 182399638 . A G, 163.91 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,18,0:0,21,0:114:202,117,0,1483,117,1483:255,120,0:0,0:1.6391e+02,1.1391e+02,0.0000e+00,4.5000e+02,1.4868e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,26:0,0,18,21 chr2 182399639 . T . PASS END=182399662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:37:0,87,1343:0,87,255:40,0 chr2 182400159 . G . PASS END=182400254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:73:0,120,1800:0,172,255:40,0 chr2 182401493 . A . PASS END=182401493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 182401540 . G . PASS END=182401540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 182401587 . C . PASS END=182401587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 182401695 . C . PASS END=182401695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 182401699 . T . PASS END=182401699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:23,0 chr2 182401704 . G . PASS END=182401704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 182401853 . A . PASS END=182401853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 182401866 . C . PASS END=182401867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:53:0,120,1800:0,152,255:40,0 chr2 182401888 . C . PASS END=182401888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 182401932 . G . PASS END=182401932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 182401996 . G . PASS END=182401996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr2 182402042 . G . PASS END=182402042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 182402131 . A . PASS END=182402131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,140,255:40,0 chr2 182402168 . C . PASS END=182402168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 182402338 . T . PASS END=182402338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 182402344 . A . PASS END=182402344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 182402459 . C . PASS END=182402459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 182402581 . G . PASS END=182402581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 182402605 . G . PASS END=182402605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,99,1485:0,126,255:33,0 chr2 182402616 . C . PASS END=182402616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 182402635 . C . PASS END=182402635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 182402674 . C . PASS END=182402674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 182402751 . A . PASS END=182402751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:24,0 chr2 182402790 . G A, 44.24 PASS DP=31;MQ=246.54;MQRankSum=4.521;ReadPosRankSum=4.521;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,11,0:0.355,0.000:31:6,5,0:14,6,0:44:79,0,50,385,715,1101:255,0,255:20,0:4.4241e+01,1.8535e-04,5.3000e+01,3.8544e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,3,10,1:5,15,6,5 chr2 182402797 . T . PASS END=182402797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1225:0,96,255:32,0 chr2 182402819 . C . PASS END=182402819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:34,0 chr2 182402834 . C . PASS END=182402834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 182402886 . C . PASS END=182402886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 182402911 . T . PASS END=182402971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:70:0,120,1800:0,194,255:40,0 chr2 182402974 . G . PASS END=182402974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,211,255:40,0 chr2 182402976 . A . PASS END=182402976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 182403819 . C . PASS END=182403850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:39:0,108,1620:0,117,255:40,0 chr2 182403851 . G A, 227.56 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,30,0:0,30,0:178:265,181,0,365,365,365:255,180,0:0,0:2.2756e+02,1.7756e+02,0.0000e+00,3.6233e+02,3.9710e+02,3.6534e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,36,24:0,0,30,30 chr2 182403852 . T . PASS END=182403888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:60:0,120,1800:0,180,255:40,0 chr2 182403889 . C . PASS END=182403992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:39:0,101,1426:0,101,255:40,0 chr2 182409426 . C . PASS END=182409523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:53:0,120,1800:0,159,255:40,0 chr2 182409526 . G . PASS END=182409526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 182412345 . C . PASS END=182412453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:87:29:0,87,1078:0,87,255:40,0 chr2 182412463 . A . PASS END=182412463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 182412549 . C . PASS END=182412574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:61:0,120,1800:0,143,255:40,0 chr2 182413272 . C . PASS END=182413296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:69:0,120,1800:0,189,255:40,0 chr2 182413297 . T . PASS END=182413332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:82:0,120,1800:0,213,255:40,0 chr2 182413396 . A . PASS END=182413396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 182413400 . G . PASS END=182413400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 182413407 . T . PASS END=182413564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,102,1530:0,115,255:40,0 chr2 182413565 . G . PASS END=182413580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,94,255:36,0 chr2 182413581 . T . PASS END=182413581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:28,0 chr2 182413582 . G . PASS END=182413585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1260:0,87,255:29,0 chr2 182414348 . G . PASS END=182414348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 182414361 . C . PASS END=182414435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,120,255:40,0 chr2 182423284 . C . PASS END=182423284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1202:0,93,255:31,0 chr2 182423288 . C . PASS END=182423288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1302:0,102,255:34,0 chr2 182423291 . G . PASS END=182423291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1294:0,102,255:34,0 chr2 182423293 . C . PASS END=182423430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1216:0,83,255:40,0 chr2 182423431 . C . PASS END=182423436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1080:0,77,255:24,0 chr2 182430160 . C . PASS END=182430238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,122,255:40,0 chr2 182430782 . T . PASS END=182430782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:83:0,120,1800:0,233,255:40,0 chr2 182430784 . C . PASS END=182430848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:85:0,120,1800:0,242,255:40,0 chr2 182438474 . A . PASS END=182438474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 182438480 . T . PASS END=182438611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:97:47:0,97,1562:0,97,255:40,0 chr2 182455994 . C . PASS END=182455994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 182468562 . A . PASS END=182468562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1365:0,108,255:36,0 chr2 182468564 . C . PASS END=182468808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,3:74:84:36:0,84,1275:0,84,255:40,0 chr2 182521482 . G . PASS END=182521482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr2 182521491 . C . PASS END=182521491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 182521495 . C . PASS END=182521523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,584:0,51,255:19,0 chr2 182521524 . C . PASS END=182521524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 182521525 . C . PASS END=182521525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 182521526 . A . PASS END=182521534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:25,0 chr2 182521535 . C . PASS END=182521535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 182521536 . T . PASS END=182521540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr2 182521541 . C . PASS END=182521542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,967:0,65,255:25,0 chr2 182521543 . C . PASS END=182521545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 182521546 . A . PASS END=182521546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 182521547 . G . PASS END=182521549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 182521550 . C . PASS END=182521552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 182521553 . C . PASS END=182521577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1210:0,86,255:32,0 chr2 182521578 . G A, 49.91 PASS DP=33;MQ=249.70;MQRankSum=4.881;ReadPosRankSum=3.692;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,16,0:0.485,0.000:33:9,8,0:8,8,0:48:85,0,50,543,600,1143:255,0,255:16,0:4.9905e+01,6.6010e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,8,12,4:11,6,12,4 chr2 182521579 . A . PASS END=182521581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 182521582 . A . PASS END=182521582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:31,0 chr2 182521583 . T . PASS END=182521615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:33,0 chr2 182521616 . C . PASS END=182521634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1231:0,86,255:34,0 chr2 182521635 . T . PASS END=182521635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:59:36:0,59,1222:0,59,255:31,0 chr2 182521636 . A . PASS END=182521662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:34:0,89,1255:0,89,255:35,0 chr2 182521663 . T . PASS END=182521663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:29,0 chr2 182521664 . C . PASS END=182521667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,89,255:30,0 chr2 182521668 . G . PASS END=182521668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr2 182521669 . G . PASS END=182521669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 182521670 . G . PASS END=182521670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1156:0,50,255:28,0 chr2 182521671 . C . PASS END=182521671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:27,0 chr2 182521672 . G . PASS END=182521672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 182521673 . C . PASS END=182521673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:27,0 chr2 182521674 . C . PASS END=182521687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 182521688 . C . PASS END=182521718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,903:0,62,255:26,0 chr2 182521719 . C . PASS END=182521719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 182521720 . C . PASS END=182521721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 182521722 . C . PASS END=182521724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 182521725 . C . PASS END=182521725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:26,0 chr2 182521726 . C . PASS END=182521731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 182521732 . A . PASS END=182521732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 182521733 . T . PASS END=182521733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 182521756 . G . PASS END=182521756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 182521796 . G . PASS END=182521796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 182521804 . C . PASS END=182521804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 182540916 . G . PASS END=182540916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 182540934 . A . PASS END=182540934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr2 182541031 . T . PASS END=182541031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 182541392 . A . PASS END=182541392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,229,255:40,0 chr2 182541421 . A . PASS END=182541421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 182541610 . A . PASS END=182541610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 182541658 . G . PASS END=182541658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 182541698 . G . PASS END=182541698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 182541722 . A . PASS END=182541722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:99:45:0,102,1521:0,102,255:38,0 chr2 182541744 . T . PASS END=182541744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,105,1657:0,105,255:40,0 chr2 182541799 . G . PASS END=182541799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,117,1755:0,128,255:39,0 chr2 182541839 . ATT A,AT,ATTT,ATTTT,ATTTTTTTT,ATTTTTTTTT, 93.52 PASS DP=28;MQ=240.37;MQRankSum=1.319;ReadPosRankSum=-2.426;FractionInformativeReads=0.786;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 7/7:4,2,4,4,1,2,5,0:0.091,0.182,0.182,0.045,0.091,0.227,0.000:22:1,2,2,1,0,0,2,0:3,0,2,3,1,2,3,0:24:131,195,187,186,312,181,151,188,183,173,128,161,157,165,171,82,139,129,127,152,132,84,150,137,128,152,312,134,27,44,41,43,44,46,46,0:255,0,255:3,13:9.3520e+01,1.5972e+02,1.5384e+02,1.5050e+02,2.7799e+02,1.4813e+02,1.1503e+02,1.5442e+02,1.4940e+02,1.4072e+02,9.2178e+01,1.2707e+02,1.2312e+02,1.3134e+02,1.3855e+02,4.6222e+01,1.0498e+02,9.5154e+01,9.3364e+01,1.1841e+02,9.9222e+01,4.8506e+01,1.1575e+02,1.0355e+02,9.4695e+01,1.1849e+02,2.7838e+02,1.0151e+02,2.3976e+01,4.2962e+01,3.9556e+01,4.1586e+01,4.3028e+01,4.4800e+01,4.4543e+01,1.9109e-02:0.00,2.00,5.00,2.00,4.00,5.00,2.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,5.00,2.00,4.00,4.00,4.00,4.00,4.00,5.00,34.77,36.77,36.77,36.77,36.77,36.77,36.77,37.77:0,4,6,12:3,1,11,7 chr2 182541873 . T . PASS END=182541873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1170:0,91,255:26,0 chr2 182541875 . C . LowGQ END=182541875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,10:36:0:36:0,0,635:219,0,255:26,0 chr2 182541900 . G . PASS END=182541900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1142:0,42,255:26,0 chr2 182541909 . A . PASS END=182541909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 182541969 . A . PASS END=182541969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:24,0 chr2 182542053 . T . PASS END=182542053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1480:0,107,255:39,0 chr2 182542063 . G . PASS END=182542063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1451:0,84,255:39,0 chr2 182542146 . T . PASS END=182542146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 182542234 . T . PASS END=182542234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:87:36:0,87,1305:0,92,255:29,0 chr2 182542264 . T . PASS END=182542264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 182542351 . C . PASS END=182542351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 182542442 . C . PASS END=182542442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 182542517 . C . PASS END=182542518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 182542519 . A . PASS END=182542519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 182542520 . A . PASS END=182542520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 182542521 . T . PASS END=182542521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 182542522 . C . PASS END=182542522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 182542523 . A . PASS END=182542523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 182542524 . T . PASS END=182542524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1031:0,51,255:29,0 chr2 182542525 . G . PASS END=182542525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 182542526 . A . PASS END=182542526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:27,0 chr2 182542527 . A . PASS END=182542527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,950:0,59,255:27,0 chr2 182542528 . A . PASS END=182542539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1148:0,93,255:31,0 chr2 182542540 . G . PASS END=182542540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 182542541 . C . PASS END=182542553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1188:0,96,255:32,0 chr2 182542554 . A . PASS END=182542554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:31,0 chr2 182542555 . C . PASS END=182542582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1211:0,88,255:34,0 chr2 182542583 . G . PASS END=182542620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,884:0,61,255:26,0 chr2 182542621 . C . PASS END=182542622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 182542623 . G . PASS END=182542623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:25,0 chr2 182542624 . C . PASS END=182542626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:25,0 chr2 182542627 . T . PASS END=182542627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,914:0,26,255:23,0 chr2 182542628 . G . PASS END=182542633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:42:27:0,42,925:0,42,255:26,0 chr2 182542634 . G . PASS END=182542634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:22,0 chr2 182542635 . A . PASS END=182542638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:40:29:0,40,933:0,40,255:25,0 chr2 182542639 . T . PASS END=182542639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 182542640 . T . PASS END=182542642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr2 182542643 . T . PASS END=182542643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 182542644 . C . PASS END=182542644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:27,0 chr2 182542645 . C . PASS END=182542645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 182542646 . G . PASS END=182542652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:48:29:0,48,1016:0,48,255:29,0 chr2 182542653 . T . PASS END=182542653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1031:0,38,255:25,0 chr2 182542654 . G . PASS END=182542654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 182542655 . G . PASS END=182542656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:55:31:0,55,1124:0,55,255:26,0 chr2 182542657 . C . PASS END=182542657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 182542658 . C . PASS END=182542658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1061:0,38,255:25,0 chr2 182542659 . C . PASS END=182542661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:55:31:0,55,1100:0,55,255:27,0 chr2 182542662 . G . PASS END=182542662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 182542663 . C . PASS END=182542664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:29,0 chr2 182542665 . A . PASS END=182542665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 182542666 . G . PASS END=182542666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr2 182542667 . T . PASS END=182542668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:30,0 chr2 182542669 . T . PASS END=182542670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr2 182542671 . G . PASS END=182542687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:26:0,65,961:0,65,255:26,0 chr2 182542688 . G . PASS END=182542688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr2 182542689 . G . PASS END=182542693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 182542694 . G . PASS END=182542704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 182542705 . T . PASS END=182542705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 182542706 . C . PASS END=182542710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 182542711 . A . PASS END=182542711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,737:0,64,255:26,0 chr2 182542712 . C . PASS END=182542720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,922:0,81,255:28,0 chr2 182542721 . C . PASS END=182542739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,970:0,67,255:26,0 chr2 182542740 . A . PASS END=182542740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,773:0,25,255:20,0 chr2 182542741 . A . PASS END=182542741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 182542742 . G . PASS END=182542759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:25,0 chr2 182542760 . C . PASS END=182542760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 182542761 . G . PASS END=182542762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 182542763 . C . PASS END=182542763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr2 182542764 . G . PASS END=182542775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 182542776 . C . PASS END=182542776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 182542777 . C . PASS END=182542777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 182542778 . A . PASS END=182542778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 182542779 . T . PASS END=182542791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr2 182542792 . T . PASS END=182542834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 182542835 . T . PASS END=182542835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:14,0 chr2 182542836 . G . PASS END=182542839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 182542840 . T . PASS END=182542840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:15,0 chr2 182542841 . G . PASS END=182542898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:15:0,41,630:0,41,255:19,0 chr2 182542899 . G . PASS END=182542923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,856:0,63,255:25,0 chr2 182542924 . G . PASS END=182542936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 182542937 . G . PASS END=182542974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 182542975 . G . PASS END=182542975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,1 chr2 182542976 . G . PASS END=182542987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr2 182542988 . G . PASS END=182542989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 182542990 . T . PASS END=182542990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 182542991 . C . PASS END=182542995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 182542996 . C . PASS END=182542997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 182542998 . G . PASS END=182543023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1108:0,84,255:32,0 chr2 182543024 . C . PASS END=182543025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:31,0 chr2 182543026 . G . PASS END=182543054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:32:0,87,1305:0,96,255:33,0 chr2 182543055 . T . PASS END=182543056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 182543057 . G . PASS END=182543065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 182543066 . C . PASS END=182543077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 182543078 . C . PASS END=182543079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 182543080 . G . PASS END=182543080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 182543081 . A . PASS END=182543081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 182543082 . A . PASS END=182543123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,908:0,65,255:28,0 chr2 182543124 . T . PASS END=182543126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 182543127 . G . PASS END=182543127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 182543128 . A . PASS END=182543134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 182543135 . C . PASS END=182543135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 182543136 . C . PASS END=182543142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 182543143 . A . PASS END=182543143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 182543144 . G . PASS END=182543165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1239:0,86,255:32,0 chr2 182543166 . T . PASS END=182543174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 182543175 . G . PASS END=182543175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 182543176 . A . PASS END=182543186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1031:0,71,255:26,0 chr2 182543187 . G . PASS END=182543190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 182543191 . T . PASS END=182543207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,917:0,64,255:25,0 chr2 182543208 . A . PASS END=182543219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr2 182543220 . T . PASS END=182543220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 182543221 . T . PASS END=182543221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:24,0 chr2 182543222 . G . PASS END=182543254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1124:0,83,255:34,0 chr2 182543255 . C . PASS END=182543255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:30,0 chr2 182543256 . C . PASS END=182543257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1249:0,89,255:32,0 chr2 182543258 . C . PASS END=182543258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:30,0 chr2 182543259 . T . PASS END=182543271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1233:0,85,255:32,0 chr2 182543272 . C . PASS END=182543272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1164:0,53,255:30,0 chr2 182543273 . C . PASS END=182543279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,98,255:32,0 chr2 182543280 . C . PASS END=182543280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,969:0,79,255:31,0 chr2 182543281 . G . PASS END=182543294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1098:0,80,255:33,0 chr2 182543295 . C . PASS END=182543295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1091:0,71,255:29,0 chr2 182543296 . G . PASS END=182543306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:33:0,93,1311:0,95,255:33,0 chr2 182543307 . G . PASS END=182543307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:30,0 chr2 182543308 . C . PASS END=182543308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1025:0,82,255:31,0 chr2 182543309 . C . PASS END=182543309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,848:0,32,255:28,0 chr2 182543310 . T . PASS END=182543311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,984:0,82,255:32,0 chr2 182543312 . A . PASS END=182543312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1033:0,66,255:30,0 chr2 182543313 . G . PASS END=182543315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1148:0,85,255:33,0 chr2 182543316 . A . PASS END=182543316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1016:0,49,255:30,0 chr2 182543317 . T . PASS END=182543331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1097:0,82,255:32,0 chr2 182543332 . G . PASS END=182543332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:32,0 chr2 182543333 . G . PASS END=182543335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:33,0 chr2 182543336 . G . PASS END=182543336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:31,0 chr2 182543337 . C . PASS END=182543355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1136:0,86,255:34,0 chr2 182543356 . C . PASS END=182543356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:33,0 chr2 182543357 . G . PASS END=182543359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:32,0 chr2 182543360 . A . PASS END=182543360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1082:0,42,255:25,0 chr2 182543361 . T . PASS END=182543389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1218:0,86,255:32,0 chr2 182543390 . C . PASS END=182543390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1139:0,66,255:29,0 chr2 182543391 . A . PASS END=182543417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1197:0,86,255:34,0 chr2 182543418 . C . PASS END=182543431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:34:0,93,1395:0,102,255:34,0 chr2 182543432 . T . PASS END=182543432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1189:0,72,255:32,0 chr2 182543433 . G . PASS END=182543447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:35:0,83,1337:0,83,255:34,0 chr2 182543448 . T . PASS END=182543448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1087:0,75,255:32,0 chr2 182543449 . T . PASS END=182543450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 182543451 . A . PASS END=182543451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr2 182543452 . T . PASS END=182543454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1189:0,88,255:34,0 chr2 182543455 . T C, 48.84 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=2.636;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:11,9,0:8,6,0:47:84,0,50,478,651,1128:255,0,255:18,0:4.8840e+01,7.8435e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,7,8:9,10,9,6 chr2 182543456 . T . PASS END=182543456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1106:0,88,255:33,0 chr2 182543457 . T . PASS END=182543457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1243:0,74,255:33,0 chr2 182543458 . C . PASS END=182543471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1271:0,89,255:35,0 chr2 182543472 . T . PASS END=182543472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr2 182543473 . T . PASS END=182543492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:89:35:0,89,1241:0,89,255:35,0 chr2 182543493 . T . PASS END=182543534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1235:0,86,255:35,0 chr2 182543535 . C . PASS END=182543535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:29,0 chr2 182543536 . C . PASS END=182543549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:31,0 chr2 182543550 . T . PASS END=182543555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:30:0,75,1125:0,80,255:26,0 chr2 182543556 . A . PASS END=182543556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr2 182543557 . T . PASS END=182543558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 182543559 . A . PASS END=182543559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,920:0,48,255:20,0 chr2 182543560 . G . PASS END=182543563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 182543564 . A . PASS END=182543564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr2 182543565 . C . PASS END=182543565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 182543566 . T . PASS END=182543566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:27:25:0,27,695:0,27,255:21,0 chr2 182543567 . C . PASS END=182543567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:20,0 chr2 182543568 . T . PASS END=182543571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 182543572 . T . PASS END=182543587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:52:19:0,52,737:0,52,255:19,0 chr2 182545226 . G . PASS END=182545226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 182545247 . C . PASS END=182545247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 182756794 . A . PASS END=182756806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:18,0 chr2 182756807 . T . PASS END=182756807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 182756808 . G . PASS END=182756811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 182756812 . T . PASS END=182756812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 182756813 . C . PASS END=182756813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 182756814 . G . PASS END=182756814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 182756815 . T . PASS END=182756817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr2 182756818 . G . PASS END=182756818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:18,0 chr2 182756819 . C . PASS END=182756824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr2 182756825 . C . PASS END=182756825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 182756826 . G . PASS END=182756826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 182756827 . G . PASS END=182756827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 182756828 . A . PASS END=182756828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:21,0 chr2 182756829 . G . PASS END=182756833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 182756834 . A . PASS END=182756834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 182756835 . A . PASS END=182756835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,787:0,69,255:23,0 chr2 182756836 . C . PASS END=182756836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 182756837 . T . PASS END=182756837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 182756838 . G . PASS END=182756838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:22,0 chr2 182756839 . G . PASS END=182756841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 182756842 . T . PASS END=182756842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 182756843 . G . PASS END=182756845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 182756846 . A . PASS END=182756846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:21,0 chr2 182756847 . A . PASS END=182756848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 182756849 . T . PASS END=182756849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 182756850 . G . PASS END=182756850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 182756851 . G . PASS END=182756851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 182756852 . C . PASS END=182756855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 182756856 . T . PASS END=182756857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:30:23:0,30,773:0,30,255:21,0 chr2 182756858 . G . PASS END=182756859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 182756860 . A . PASS END=182756860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 182756861 . G . PASS END=182756864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 182756865 . G . PASS END=182756865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr2 182756866 . A . PASS END=182756869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 182756870 . C . PASS END=182756870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 182756871 . C . PASS END=182756871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:20,0 chr2 182756872 . T . PASS END=182756872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:21,0 chr2 182756873 . G . PASS END=182756873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,678:0,27,255:21,0 chr2 182756874 . G . PASS END=182756874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 182756875 . G . PASS END=182756875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 182756876 . C . PASS END=182756876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,821:0,66,255:22,0 chr2 182756877 . C . PASS END=182756877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 182756878 . A . PASS END=182756878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,719:0,66,255:22,0 chr2 182756879 . A . PASS END=182756879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,629:0,33,255:20,0 chr2 182756880 . G . PASS END=182756880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 182756881 . T . PASS END=182756881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:21,0 chr2 182756882 . G . PASS END=182756885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 182756886 . C . PASS END=182756887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 182756888 . G . PASS END=182756891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 182756892 . C . PASS END=182756892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 182756893 . T . PASS END=182756893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:21,0 chr2 182756894 . G . PASS END=182756896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 182756897 . A . PASS END=182756897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr2 182756898 . A . PASS END=182756901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,770:0,66,255:22,0 chr2 182756902 . T . PASS END=182756902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:20,0 chr2 182756903 . C . PASS END=182756905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 182756906 . A . PASS END=182756906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,717:0,35,255:18,0 chr2 182756907 . G . PASS END=182756908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:19,0 chr2 182756909 . C . PASS END=182756910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 182756911 . G . PASS END=182756911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:18,0 chr2 182756912 . A . PASS END=182756914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 182756915 . A . PASS END=182756915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 182756916 . T . PASS END=182756919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 182756920 . T . PASS END=182756920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:19,0 chr2 182756921 . C . PASS END=182756923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:20,0 chr2 182756924 . C . PASS END=182756925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,682:0,44,255:19,0 chr2 182756926 . G . PASS END=182756928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,691:0,60,255:20,0 chr2 182756929 . G . PASS END=182756935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,44,255:19,0 chr2 182756936 . C . PASS END=182756941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,43,255:13,0 chr2 182756942 . A . PASS END=182756943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 182756944 . G . PASS END=182756944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 182756945 . A . PASS END=182756946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 182756947 . G . PASS END=182756947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 182756948 . A . PASS END=182756948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 182756949 . G . PASS END=182756949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 182756950 . G . PASS END=182756958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 182756959 . G . PASS END=182756960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 182756961 . G . PASS END=182756962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 182756963 . A . PASS END=182756980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 182756981 . A . PASS END=182756981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 182756982 . G . PASS END=182757004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr2 182757342 . G . PASS END=182757391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,181,255:40,0 chr2 182760757 . T . PASS END=182760806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:72:0,120,1800:0,206,255:40,0 chr2 182761635 . G . PASS END=182761691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:64:0,120,1800:0,141,255:40,0 chr2 182763607 . C . PASS END=182763646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,167,255:40,0 chr2 182763741 . C . PASS END=182763839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:41:0,102,1647:0,102,255:40,0 chr2 182765423 . T . PASS END=182765631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:96:33:0,96,1394:0,98,255:40,0 chr2 182766493 . G . PASS END=182766493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 182766494 . C . PASS END=182766494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 182766495 . C . PASS END=182766513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,750:0,66,255:23,0 chr2 182766514 . T . PASS END=182766514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 182766515 . G . PASS END=182767193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:84:29:0,84,1166:0,86,255:40,1 chr2 182774626 . G . PASS END=182774698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:59:0,120,1800:0,148,255:40,0 chr2 182775344 . A . PASS END=182775356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,191,255:40,0 chr2 182778572 . A . PASS END=182778660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:61:0,120,1800:0,134,255:40,0 chr2 182779943 . G . PASS END=182779960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,799:0,66,255:25,0 chr2 182779961 . G . PASS END=182780053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1202:0,81,255:40,0 chr2 182780054 . T . PASS END=182780054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1101:0,72,255:28,0 chr2 182780055 . A . PASS END=182780065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:32,0 chr2 182780066 . T . PASS END=182780066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:29,0 chr2 182780067 . C . PASS END=182780077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:32,0 chr2 182780078 . T . PASS END=182780078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,983:0,79,255:30,0 chr2 182780079 . C . PASS END=182780081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 182780082 . T . PASS END=182780082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1149:0,50,255:32,0 chr2 182780083 . T . PASS END=182780529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:34:0,84,1202:0,84,255:40,0 chr2 182780530 . A . PASS END=182780530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1410:0,76,255:37,0 chr2 182780531 . A . PASS END=182780828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:32:0,80,1170:0,80,255:40,0 chr2 182780829 . A . PASS END=182780829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1390:0,68,255:29,0 chr2 182780830 . G . PASS END=182780832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:41:0,90,1350:0,107,255:30,0 chr2 182780833 . A . PASS END=182780833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1381:0,51,255:29,0 chr2 182780834 . T . PASS END=182780835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,114,255:28,0 chr2 182780836 . C . PASS END=182780836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 182780837 . C . PASS END=182780846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:30,0 chr2 182780847 . G . PASS END=182780848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 182780849 . A . PASS END=182780855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1194:0,83,255:29,0 chr2 182780856 . C . PASS END=182780858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:29:0,75,1125:0,87,255:25,0 chr2 182780859 . G . PASS END=182780861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 182780862 . C . PASS END=182780873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 182780874 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.415;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:8,3,0:4,12,0:48:85,0,49,508,389,897:255,0,255:10,0:5.0000e+01,6.9375e-05,5.2253e+01,4.5000e+02,4.2403e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,8,7:8,4,6,9 chr2 182780875 . A . PASS END=182780876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 182780877 . C . PASS END=182780880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 182780881 . A . PASS END=182780882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 182780883 . T . PASS END=182780896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:34,0 chr2 182780897 . T . PASS END=182780897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:33,0 chr2 182780898 . G . PASS END=182780911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1233:0,96,255:32,0 chr2 182780912 . A . PASS END=182780948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:33:0,91,1211:0,91,255:40,0 chr2 182780949 . A . PASS END=182780949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1465:0,76,255:34,0 chr2 182780950 . C . PASS END=182781131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:38:0,84,1325:0,84,255:40,0 chr2 182781132 . A . PASS END=182781132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1320:0,78,255:37,0 chr2 182781133 . C . PASS END=182781154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1357:0,95,255:37,0 chr2 182781327 . G . PASS END=182781413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:62:0,120,1800:0,137,255:40,0 chr2 182783325 . T . PASS END=182783402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,102,1498:0,102,255:40,0 chr2 182783482 . A . PASS END=182783520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,105,1457:0,105,255:40,0 chr2 182783521 . A . PASS END=182783521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1354:0,65,255:40,0 chr2 182783522 . A . PASS END=182783566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,114,1596:0,116,255:40,0 chr2 182783567 . G . PASS END=182783582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,109,1315:0,109,255:40,0 chr2 182783583 . T . PASS END=182783583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:56:42:0,56,1322:0,56,255:40,0 chr2 182783584 . T . PASS END=182783584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1222:0,67,255:39,0 chr2 182783585 . A . PASS END=182783606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:84:33:0,84,1260:0,88,255:40,0 chr2 182783607 . G . PASS END=182783607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,950:0,49,255:27,0 chr2 182783608 . A . PASS END=182783608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 182783609 . G . LowGQ END=182783609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,8:29:0:29:0,0,451:60,0,255:21,0 chr2 182784023 . G . PASS END=182784023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 182784024 . T . PASS END=182784046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:38,0 chr2 182784047 . T . PASS END=182784047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1088:0,64,255:36,0 chr2 182784048 . T . PASS END=182784132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:39:0,90,1350:0,107,255:40,0 chr2 182784133 . C . PASS END=182784141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:30:0,63,945:0,90,255:26,0 chr2 182784142 . T . PASS END=182784155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:20:0,54,810:0,60,255:19,0 chr2 182784156 . C . PASS END=182784156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 182784157 . G . PASS END=182784168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,43,255:18,0 chr2 182784169 . T . PASS END=182784169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr2 182784170 . C . PASS END=182784172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 182784173 . G . PASS END=182784173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:18:0,36,540:0,54,255:12,0 chr2 182785324 . G . PASS END=182785389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:66:0,120,1800:0,180,255:40,0 chr2 182786675 . G . PASS END=182786675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 182786676 . T . PASS END=182786679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr2 182786680 . T . PASS END=182786680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 182786681 . G . PASS END=182786686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,915:0,75,255:26,0 chr2 182786687 . A . PASS END=182786932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:27:0,81,1002:0,81,255:40,0 chr2 182786933 . C . PASS END=182786933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1271:0,61,255:28,0 chr2 182786934 . C . PASS END=182786957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1104:0,80,255:32,0 chr2 182786958 . C . PASS END=182786959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,80,255:26,0 chr2 182786960 . G . PASS END=182787050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:34:0,88,1166:0,88,255:40,0 chr2 182787051 . A . PASS END=182787051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1425:0,79,255:38,0 chr2 182787052 . A . PASS END=182787139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1260:0,92,255:40,0 chr2 182792888 . A . PASS END=182792992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:45:0,113,1707:0,113,255:40,0 chr2 182794288 . G . PASS END=182794383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:63:0,120,1800:0,163,255:40,0 chr2 182850838 . A . PASS END=182850918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,122,255:40,1 chr2 182852545 . C . PASS END=182852626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:70:0,120,1800:0,182,255:40,0 chr2 182900676 . A . PASS END=182900677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1221:0,91,255:34,0 chr2 182900678 . G . PASS END=182900689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1425:0,90,255:40,0 chr2 182900690 . A . PASS END=182900690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:54:56:0,54,1545:0,54,255:40,0 chr2 182900691 . T . PASS END=182900691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 182900692 . A . PASS END=182900692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,6:56:68:56:0,68,1510:0,68,255:40,0 chr2 182900693 . C . PASS END=182900716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:98:52:0,98,1468:0,98,255:40,0 chr2 182900717 . T . PASS END=182900717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:12:61:0,12,1961:0,12,255:40,9 chr2 182900718 . A . LowGQ END=182900720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,9:65:0:65:0,0,1767:0,0,255:40,9 chr2 182900721 . C . PASS END=182900760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:69:0,120,1800:0,207,255:40,0 chr2 182900761 . T . PASS END=182900817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:55:0,120,1800:0,147,255:40,0 chr2 182926169 . A . PASS END=182926206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:75:0,120,1800:0,194,255:40,0 chr2 182928458 . T . PASS END=182928517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,120,1800:0,145,255:40,0 chr2 182928518 . G . PASS END=182928518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,157,255:40,0 chr2 182981934 . G . PASS END=182981967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:41:0,113,1566:0,113,255:40,0 chr2 182981968 . A G, 47.30 PASS DP=51;MQ=249.21;MQRankSum=6.019;ReadPosRankSum=4.220;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,21,0:0.412,0.000:51:13,12,0:17,9,0:46:82,0,50,714,1035,1749:255,0,255:25,0:4.7298e+01,1.0277e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,9,9,12:12,18,12,9 chr2 182981969 . T . PASS END=182982022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,104,1744:0,104,255:40,1 chr2 183011806 . C . PASS END=183011879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,157,255:40,0 chr2 183032974 . T . PASS END=183032977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:80:0,120,1800:0,230,255:40,0 chr2 183032978 . T . PASS END=183033017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:65:0,111,1800:0,111,255:40,1 chr2 183036984 . T . PASS END=183036984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 183036985 . T . PASS END=183036985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 183036986 . A . PASS END=183037051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1224:0,83,255:40,0 chr2 183037052 . A . PASS END=183037075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1099:0,88,255:35,0 chr2 183037076 . G . PASS END=183037088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:27:0,60,900:0,65,255:25,0 chr2 183037089 . G T, 50.00 PASS DP=27;MQ=248.95;MQRankSum=3.761;ReadPosRankSum=1.868;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:8,8,0:5,6,0:48:85,0,50,460,459,918:255,0,255:10,0:5.0000e+01,6.5492e-05,5.2952e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,7,7:7,6,9,5 chr2 183037090 . G . PASS END=183037092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 183037093 . G . PASS END=183037096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 183038155 . C . PASS END=183038163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,157,255:40,0 chr2 183038164 . G T, 45.93 PASS DP=65;MQ=250.00;MQRankSum=6.701;ReadPosRankSum=6.192;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,25,0:0.391,0.000:64:16,7,0:23,18,0:45:81,0,50,894,1395,2289:255,0,255:39,0:4.5935e+01,1.3254e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,20,17,8:16,23,9,16 chr2 183038165 . T . PASS END=183038201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:66:0,120,1800:0,168,255:40,0 chr2 183038202 . C . PASS END=183038238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,133,255:40,0 chr2 183048060 . T . PASS END=183048147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:39:0,84,1260:0,102,255:40,0 chr2 183048148 . C . PASS END=183048148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:28,0 chr2 183048149 . A . PASS END=183048154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1215:0,90,255:28,0 chr2 183048155 . G . PASS END=183048157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 183050619 . C . PASS END=183050806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:84:36:0,84,1260:0,108,255:40,0 chr2 183051195 . C . PASS END=183051315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:44:0,105,1686:0,105,255:40,0 chr2 183053706 . C . PASS END=183053787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:49:0,120,1779:0,120,255:40,0 chr2 183066166 . C . PASS END=183066286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,126,255:40,0 chr2 183066415 . C . PASS END=183066431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:94:68:0,94,1800:0,94,255:40,0 chr2 183066432 . A . PASS END=183066516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:58:0,120,1800:0,138,255:40,0 chr2 183070667 . C . PASS END=183070792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:36:0,87,1305:0,97,255:40,0 chr2 183088591 . C . PASS END=183088621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,102,1646:0,102,255:40,0 chr2 183088622 . C . PASS END=183088691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,161,255:40,0 chr2 183094733 . C . PASS END=183094873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:90:41:0,90,1342:0,90,255:40,0 chr2 183095742 . C . PASS END=183095858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,117,1762:0,117,255:40,0 chr2 183099159 . C . PASS END=183099225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:65:0,120,1800:0,171,255:40,0 chr2 183104837 . C . PASS END=183104844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:40,0 chr2 183104845 . A . PASS END=183104845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:35:43:0,35,1382:0,35,255:39,0 chr2 183104846 . A . PASS END=183104930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:42:0,85,1464:0,85,255:40,2 chr2 183104931 . T . PASS END=183104931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:67:48:0,67,1645:0,67,255:40,0 chr2 183104932 . A . PASS END=183104963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:32:0,82,1241:0,82,255:40,0 chr2 183104964 . A . PASS END=183104964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:22,0 chr2 183104965 . T . PASS END=183104968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,80,255:22,0 chr2 183104969 . A . PASS END=183105002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,52,255:19,0 chr2 183105003 . C . PASS END=183105005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:12,0 chr2 183105006 . T . PASS END=183105012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,629:0,41,255:15,0 chr2 183105013 . A . PASS END=183105019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr2 183106529 . T . PASS END=183106641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:79:0,120,1800:0,196,255:40,0 chr2 183129028 . C . PASS END=183129105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:80:32:0,80,1139:0,80,255:40,0 chr2 183129106 . T . PASS END=183129120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:46:0,81,1215:0,125,255:37,0 chr2 183129121 . T . PASS END=183129131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:60:40:0,60,900:0,110,255:25,0 chr2 183129132 . G . PASS END=183129141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:51:36:0,51,765:0,108,255:19,0 chr2 183291305 . C . PASS END=183291357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:56:0,120,1800:0,162,255:40,0 chr2 183387003 . A . PASS END=183387113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:57:0,120,1800:0,153,255:40,0 chr2 183387365 . A . PASS END=183387366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:84:0,120,1800:0,252,255:40,0 chr2 183582814 . A . PASS END=183583017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:37:0,90,1350:0,110,255:40,0 chr2 183584734 . A . PASS END=183584754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,162,255:40,0 chr2 183584755 . G A, 49.76 PASS DP=81;MQ=249.83;MQRankSum=7.684;ReadPosRankSum=2.606;FractionInformativeReads=0.988;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,38,0:0.475,0.000:80:23,22,0:19,16,0:48:85,0,50,1306,1494,2800:255,0,255:40,0:4.9763e+01,6.7563e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,13,27,11:20,22,25,13 chr2 183584756 . A . PASS END=183584792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:80:0,120,1800:0,213,255:40,0 chr2 183584793 . A . PASS END=183584896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,2:96:99:51:0,120,1776:0,120,255:40,0 chr2 183586752 . G . PASS END=183586802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:65:0,120,1800:0,191,255:40,0 chr2 183593303 . A . PASS END=183593385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:38:0,87,1305:0,108,255:40,0 chr2 183593590 . T . PASS END=183593659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:32:0,90,1213:0,96,255:40,0 chr2 183593660 . T . PASS END=183593696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,140,255:40,0 chr2 183593697 . C T, 187.52 PASS DP=47;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,27,0:0,20,0:138:225,141,0,1716,141,1716:255,141,0:0,0:1.8752e+02,1.3752e+02,0.0000e+00,4.5000e+02,1.7229e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,23:0,0,28,19 chr2 183593698 . C . PASS END=183593721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,108,1548:0,110,255:40,0 chr2 183594575 . G . PASS END=183594668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:45:0,119,1681:0,119,255:40,0 chr2 183595261 . A . PASS END=183595269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:85:0,120,1800:0,251,255:40,0 chr2 183595757 . G . PASS END=183595834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:71:0,120,1800:0,200,255:40,0 chr2 183597226 . A . PASS END=183597269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:60:0,120,1800:0,180,255:40,0 chr2 183600283 . G . PASS END=183600320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,174,255:40,0 chr2 183600976 . G . PASS END=183600980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:67:24:0,67,825:0,67,255:27,0 chr2 183600981 . T . PASS END=183600983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,980:0,84,255:28,0 chr2 183600984 . T . PASS END=183600984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:29,0 chr2 183600985 . G . PASS END=183601113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:87:31:0,87,1097:0,87,255:40,0 chr2 183604272 . C . PASS END=183604283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:88:0,120,1800:0,229,255:40,0 chr2 183605026 . T . PASS END=183605115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:62:0,120,1800:0,153,255:40,0 chr2 183605970 . G . PASS END=183606083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:72:0,120,1800:0,203,255:40,0 chr2 183608325 . G . PASS END=183608439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,105,1575:0,118,255:40,0 chr2 183616385 . G . PASS END=183616512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:39:0,86,1262:0,86,255:40,0 chr2 183616799 . T . PASS END=183616903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:85:39:0,85,1395:0,85,255:40,0 chr2 183616904 . C . PASS END=183616913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:32:0,60,900:0,96,255:25,0 chr2 183616914 . T . PASS END=183616915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:51:26:0,51,765:0,78,255:18,0 chr2 183619730 . T . PASS END=183619831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:51:0,120,1800:0,140,255:40,0 chr2 183621041 . G . PASS END=183621130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:95:35:0,95,1280:0,95,255:40,0 chr2 183621131 . G . PASS END=183621131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,7:64:76:64:0,76,2064:0,76,255:40,0 chr2 183621132 . A . PASS END=183621162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:48:0,80,1444:0,80,255:40,0 chr2 183621163 . A . PASS END=183621164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:71:47:0,71,1263:0,71,255:38,0 chr2 183621165 . T . PASS END=183621165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 183621166 . C . PASS END=183621166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1441:0,58,255:35,0 chr2 183621167 . T . PASS END=183621173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:42:0,104,1432:0,104,255:40,0 chr2 183621174 . C . PASS END=183621174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1196:0,73,255:33,0 chr2 183621175 . A . PASS END=183621175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,122,255:36,0 chr2 183621176 . G . PASS END=183621176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1155:0,73,255:33,0 chr2 183621177 . A . PASS END=183621177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1415:0,109,255:36,0 chr2 183621178 . A . PASS END=183621178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:59:42:0,59,1079:0,59,255:34,0 chr2 183621179 . T . PASS END=183621180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 183621181 . G . PASS END=183621181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,6:42:4:42:0,4,1050:0,4,255:31,0 chr2 183621182 . A . PASS END=183621185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,105,1575:0,108,255:36,0 chr2 183621186 . G . PASS END=183621186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1108:0,70,255:33,0 chr2 183621187 . A . PASS END=183621196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1125:0,81,255:36,0 chr2 183622419 . A . PASS END=183622419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 183622420 . C . PASS END=183622509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:92:36:0,92,1332:0,92,255:40,0 chr2 183622510 . T . PASS END=183622546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:82:0,120,1800:0,180,255:40,0 chr2 183622547 . T G, 290.78 PASS DP=81;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,81,0:1.000,0.000:81:0,30,0:0,51,0:241:329,244,0,3109,244,3109:255,247,0:0,0:2.9078e+02,2.4078e+02,0.0000e+00,4.5000e+02,2.7555e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,41:0,0,41,40 chr2 183622548 . T . PASS END=183622552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:76:0,120,1800:0,211,255:40,0 chr2 183623564 . C . PASS END=183623617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:76:0,120,1800:0,205,255:40,0 chr2 183623887 . A . PASS END=183624034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:90:43:0,90,1350:0,108,255:40,0 chr2 183627409 . A . PASS END=183627415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:36:0,108,1244:0,108,255:40,0 chr2 183627416 . A . PASS END=183627416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1366:0,76,255:39,0 chr2 183627417 . A . PASS END=183627466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:40:0,90,1419:0,90,255:40,0 chr2 183627467 . G . PASS END=183627503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:37:0,99,1485:0,111,255:40,0 chr2 183627504 . A G, 158.36 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,23,0:0,14,0:108:196,111,0,1427,111,1427:255,111,0:0,0:1.5836e+02,1.0836e+02,0.0000e+00,4.5000e+02,1.4313e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,23:0,0,22,15 chr2 183627505 . T . PASS END=183627528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:34,0 chr2 183640043 . A . PASS END=183640147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,105,1648:0,105,255:40,0 chr2 183641848 . G . PASS END=183641859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:109:0,120,1800:0,255,255:40,0 chr2 183699576 . T . PASS END=183699690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:37:0,81,1215:0,95,255:40,0 chr2 183699691 . C . PASS END=183699692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 183702676 . C . PASS END=183702739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:72:0,120,1800:0,185,255:40,0 chr2 183703137 . C . PASS END=183703298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:39:0,101,1395:0,101,255:40,0 chr2 183703299 . T . PASS END=183703335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1260:0,92,255:40,0 chr2 183703336 . G A, 48.66 PASS DP=35;MQ=250.00;MQRankSum=4.983;ReadPosRankSum=4.383;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,15,0:0.429,0.000:35:13,10,0:7,5,0:47:83,0,50,537,658,1194:255,0,255:15,0:4.8662e+01,8.0765e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,14,4,11:7,13,7,8 chr2 183703337 . A . PASS END=183703341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,85,255:28,0 chr2 183707206 . C . PASS END=183707271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:80:0,120,1800:0,205,255:40,0 chr2 183723514 . C . PASS END=183723561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:70:0,120,1800:0,141,255:40,0 chr2 183730803 . C . PASS END=183730803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr2 183730804 . A . PASS END=183730804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 183730805 . G . PASS END=183730805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 183730806 . C . PASS END=183730806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 183730807 . T . PASS END=183730807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 183730808 . C . PASS END=183730824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 183730825 . G . PASS END=183730825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 183730826 . G . PASS END=183730843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,568:0,51,255:17,0 chr2 183730844 . A . PASS END=183730860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:14:0,33,495:0,42,255:13,0 chr2 183730861 . T . PASS END=183730861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:3:12:0,3,355:0,3,255:9,0 chr2 183730862 . G . PASS END=183730872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:13,0 chr2 183730873 . G . PASS END=183730873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:12,0 chr2 183730874 . C . PASS END=183730896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 183730897 . G . PASS END=183730899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 183730900 . G . PASS END=183730931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 183730932 . G . PASS END=183730932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 183730933 . C . PASS END=183730938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 183730939 . C . PASS END=183730941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 183730942 . C . PASS END=183730948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 183730949 . A . PASS END=183730949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 183730950 . C . PASS END=183730980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:14:0,40,527:0,40,255:19,0 chr2 183730981 . G . PASS END=183730986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 183730987 . A . PASS END=183730998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,690:0,44,255:18,0 chr2 183730999 . G . PASS END=183730999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr2 183731000 . G . PASS END=183731043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr2 183731044 . G . PASS END=183731049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 183731050 . G . PASS END=183731063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 183731064 . C . PASS END=183731067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 183731068 . C . PASS END=183731086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,698:0,54,255:18,0 chr2 183731087 . G . PASS END=183731087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 183731088 . C . PASS END=183731100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:22:0,53,798:0,53,255:19,0 chr2 183731101 . G . PASS END=183731113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 183731114 . T . PASS END=183731114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 183731115 . G . PASS END=183731151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,786:0,66,255:23,0 chr2 183731152 . G . PASS END=183731152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr2 183731153 . C . PASS END=183731168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,947:0,64,255:26,0 chr2 183731169 . C . PASS END=183731169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 183731170 . G . PASS END=183731227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,870:0,65,255:25,0 chr2 183731228 . G . PASS END=183731228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:20,0 chr2 183731229 . C . PASS END=183731231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 183731232 . G . PASS END=183731241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 183731242 . C . PASS END=183731253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr2 183731254 . C . PASS END=183731280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,660:0,43,255:19,0 chr2 183790430 . T . PASS END=183790546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:53:0,120,1800:0,149,255:40,0 chr2 183791544 . C . PASS END=183791633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:75:0,120,1800:0,195,255:40,0 chr2 183792845 . C . PASS END=183792954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:48:0,83,1729:0,83,255:40,0 chr2 183793511 . C . PASS END=183793511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 183793512 . T . PASS END=183793512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 183793513 . T . PASS END=183793615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:31:0,90,1250:0,93,255:40,0 chr2 183793616 . G . PASS END=183793627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:42:0,105,1575:0,110,255:40,0 chr2 183795423 . C . PASS END=183795516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:38:0,96,1440:0,114,255:40,0 chr2 183799480 . C . PASS END=183799520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,223,255:40,0 chr2 183799521 . C . PASS END=183799557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:73:0,114,1710:0,208,255:40,0 chr2 183799558 . G C, 50.00 PASS DP=72;MQ=250.00;MQRankSum=7.281;ReadPosRankSum=2.927;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,38,0:0.528,0.000:72:22,17,0:12,21,0:48:85,0,50,1349,1187,2536:255,0,255:15,0:5.0000e+01,6.6786e-05,5.2707e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,23,11,27:11,23,18,20 chr2 183799559 . A . PASS END=183799560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,114,1710:0,203,255:39,0 chr2 183800021 . A . PASS END=183800103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,151,255:40,0 chr2 183806798 . A . PASS END=183806848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,102,1558:0,102,255:40,0 chr2 183806849 . T . PASS END=183806879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:57:0,81,1215:0,104,255:40,0 chr2 183806880 . C . PASS END=183806891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:60:53:0,60,900:0,158,255:25,0 chr2 183817133 . C . PASS END=183817230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:49:0,120,1800:0,147,255:40,0 chr2 183817521 . C . PASS END=183817651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:58:0,120,1800:0,155,255:40,0 chr2 183817841 . C . PASS END=183818059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:84:35:0,84,1263:0,84,255:40,0 chr2 183821190 . T . PASS END=183821321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,120,1800:0,127,255:40,0 chr2 183822185 . T . PASS END=183822324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:94:40:0,94,1423:0,94,255:40,0 chr2 183826887 . C . PASS END=183826980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:39:0,101,1421:0,101,255:40,0 chr2 183826981 . A . PASS END=183827006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,111,1665:0,123,255:40,0 chr2 183829404 . C . PASS END=183829536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:48:0,108,1620:0,118,255:40,0 chr2 183831944 . C . PASS END=183832055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,133,255:40,0 chr2 183832056 . G . PASS END=183832079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:93:55:0,93,1395:0,124,255:40,0 chr2 183832080 . T . PASS END=183832086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:60:51:0,60,900:0,118,255:23,0 chr2 183832087 . T . PASS END=183832089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:54:48:0,54,810:0,144,255:19,0 chr2 183841621 . C . PASS END=183841641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:74:0,120,1800:0,206,255:40,0 chr2 183841642 . T . PASS END=183841668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:81:0,102,1530:0,190,255:40,0 chr2 183841669 . C . PASS END=183841673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:63:81:0,63,945:0,213,255:24,0 chr2 183841674 . C . PASS END=183841679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,2:79:42:78:0,42,630:0,181,255:16,0 chr2 183843562 . C . PASS END=183843643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,3:77:99:48:0,120,1800:0,127,255:40,0 chr2 183845972 . C . PASS END=183846104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:34:0,85,1172:0,85,255:40,0 chr2 183847549 . T . PASS END=183847655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:52:0,120,1800:0,123,255:40,0 chr2 183848014 . C . PASS END=183848076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,141,255:40,0 chr2 183848077 . T . PASS END=183848110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:41:0,96,1440:0,123,255:40,0 chr2 183850899 . G . PASS END=183850914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,195,255:40,0 chr2 183850915 . C . PASS END=183850955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,159,255:40,0 chr2 183853758 . C . PASS END=183853895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:38:0,93,1350:0,98,255:40,0 chr2 183853896 . T . PASS END=183853896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1275:0,65,255:28,0 chr2 183853897 . G . PASS END=183853905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1186:0,86,255:30,0 chr2 183853906 . T . PASS END=183853906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1158:0,71,255:29,0 chr2 183853907 . A . PASS END=183853914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:30,0 chr2 183859567 . A . PASS END=183859615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:83:0,120,1800:0,249,255:40,0 chr2 183860429 . A . PASS END=183860439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr2 183860440 . G . PASS END=183860442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 183860443 . C . PASS END=183860444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 183860445 . G . PASS END=183860453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1111:0,80,255:33,0 chr2 183860454 . A . PASS END=183860454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1127:0,60,255:32,0 chr2 183860455 . T . PASS END=183860563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:33:0,86,1210:0,86,255:40,0 chr2 183860564 . A . PASS END=183860564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,1008:0,35,255:27,0 chr2 183860565 . G . PASS END=183860566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1177:0,80,255:31,0 chr2 183866681 . C . PASS END=183866771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:68:0,120,1800:0,174,255:40,0 chr2 183866855 . C . PASS END=183866961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:76:0,120,1800:0,190,255:40,0 chr2 183866962 . A . PASS END=183866997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:62:0,81,1215:0,176,255:40,0 chr2 183867702 . A . PASS END=183867758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:91:0,120,1800:0,225,255:40,0 chr2 183867961 . C . PASS END=183868053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:81:0,120,1800:0,206,255:40,0 chr2 183888534 . A . PASS END=183888633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:93:42:0,93,1395:0,103,255:40,0 chr2 183888634 . T . PASS END=183888642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:37:0,75,1125:0,98,255:25,0 chr2 183888643 . G . PASS END=183888644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:57:33:0,57,855:0,83,255:19,0 chr2 183889706 . C . PASS END=183889723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:62:0,120,1800:0,148,255:40,0 chr2 183902720 . C . PASS END=183902730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 183902731 . T . PASS END=183902732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 183902733 . T . PASS END=183902733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 183902734 . A . PASS END=183902736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 183902737 . G . PASS END=183902737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 183902738 . G . PASS END=183902755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,537:0,48,255:17,0 chr2 183902756 . G . PASS END=183902756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 183902757 . C . PASS END=183902767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr2 183902768 . G . PASS END=183902768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 183902769 . A . PASS END=183902769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 183902770 . G . PASS END=183902770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 183902771 . G . PASS END=183902773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 183902774 . G . PASS END=183902775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:16,0 chr2 183902776 . T . PASS END=183902778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 183902779 . G . PASS END=183902779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 183902780 . C . PASS END=183902784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,597:0,51,255:17,0 chr2 183902785 . C . PASS END=183902785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 183902786 . C . PASS END=183902786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 183902787 . G . PASS END=183902787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 183902788 . C . PASS END=183902790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 183902791 . G . PASS END=183902791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:12,0 chr2 183902792 . C . PASS END=183902796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 183902797 . G . PASS END=183902797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 183902798 . C . PASS END=183902798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 183902799 . T . PASS END=183902801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,585:0,35,255:13,0 chr2 183902802 . C . PASS END=183902802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 183902803 . T . PASS END=183902821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:13:0,30,450:0,31,255:15,0 chr2 183902822 . C . PASS END=183902827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,36,255:8,0 chr2 183943662 . A . PASS END=183943881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:84:36:0,84,1260:0,92,255:40,0 chr2 183943882 . T . PASS END=183943882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:28,0 chr2 183943883 . C . PASS END=183943883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 183943884 . C . PASS END=183943887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,77,255:25,0 chr2 183948236 . G . PASS END=183948282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:83:0,120,1800:0,216,255:40,0 chr2 183951768 . G . PASS END=183951920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:44:0,101,1471:0,101,255:40,0 chr2 183960159 . G . PASS END=183960159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 183960160 . A . PASS END=183960160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1161:0,58,255:33,0 chr2 183960161 . T . PASS END=183960161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1274:0,91,255:34,0 chr2 183960162 . G . PASS END=183960162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1201:0,75,255:34,0 chr2 183960163 . G . PASS END=183960170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:81:40:0,81,1376:0,81,255:40,0 chr2 183960171 . C . PASS END=183960171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:40:43:0,40,1264:0,40,255:39,0 chr2 183960172 . T . PASS END=183960172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1437:0,74,255:40,0 chr2 183960173 . T . PASS END=183960180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:44:0,80,1310:0,80,255:40,0 chr2 183960181 . G . PASS END=183960181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:39:50:0,39,1463:0,39,255:40,0 chr2 183960182 . T . PASS END=183960188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:80:50:0,80,1575:0,80,255:40,0 chr2 183960189 . G . PASS END=183960189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:51:54:0,51,1603:0,51,255:40,0 chr2 183960190 . G . PASS END=183960194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:54:0,120,1800:0,132,255:40,0 chr2 183960195 . T . PASS END=183960195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr2 183960196 . C . PASS END=183960196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,4:59:74:59:0,74,1812:0,74,255:40,0 chr2 183960197 . C . PASS END=183960386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:88:36:0,88,1395:0,88,255:40,0 chr2 183988506 . A . PASS END=183988529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,173,255:40,0 chr2 183988530 . A . PASS END=183988554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,104,1800:0,104,255:40,0 chr2 183989186 . A . PASS END=183989225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,120,1800:0,131,255:40,0 chr2 183993015 . G . PASS END=183993021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 183993022 . A . PASS END=183993022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 183993023 . C . PASS END=183993028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:24,0 chr2 183993029 . A . PASS END=183993030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 183993031 . G . PASS END=183993031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:25,0 chr2 183993032 . C . PASS END=183993032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:25,0 chr2 183993033 . T . PASS END=183993034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 183993035 . G . PASS END=183993185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:30:0,81,1215:0,90,255:40,0 chr2 183995146 . G . PASS END=183995146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr2 183995147 . T . PASS END=183995155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:39:0,96,1337:0,96,255:40,0 chr2 183995156 . A . PASS END=183995156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1488:0,66,255:40,0 chr2 183995157 . C . PASS END=183995164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:85:46:0,85,1509:0,85,255:40,0 chr2 183995165 . A . PASS END=183995165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1668:0,78,255:40,0 chr2 183995166 . G . PASS END=183995170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:99:52:0,106,1775:0,106,255:40,0 chr2 183995171 . A . PASS END=183995171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:68:52:0,68,1644:0,68,255:40,0 chr2 183995172 . C . PASS END=183995174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,106,1693:0,106,255:40,0 chr2 183995175 . G . PASS END=183995175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:67:52:0,67,1629:0,67,255:40,0 chr2 183995176 . C . PASS END=183995184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:52:0,84,1699:0,84,255:40,0 chr2 183995185 . A . PASS END=183995273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,120,1800:0,122,255:40,0 chr2 183995723 . G . PASS END=183995728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 183995729 . C T, 11.51 PASS DP=10;MQ=246.90;MQRankSum=0.000;ReadPosRankSum=0.000;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:8,2,0:0.200,0.000:10:5,1,0:3,1,0:12:46,0,50,69,228,298:48,0,236:7,0:1.1507e+01,3.1837e-01,5.3318e+01,6.9428e+01,2.6348e+02,3.0082e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,4,0,2:3,5,1,1:183995729 chr2 183995730 . A . PASS END=183995730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 183995731 . A . PASS END=183995732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 183995733 . A . PASS END=183995733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 183995734 . G . PASS END=183995741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:12,0 chr2 183995742 . A C, 83.12 PASS DP=12;MQ=247.42;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,12,0:1.000,0.000:12:0,7,0:0,5,0:33:121,36,0,465,36,465:255,36,0:0,0:8.3119e+01,3.3119e+01,2.1190e-03,4.5000e+02,6.7889e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,6:0,0,5,7:183995729 chr2 183995743 . T . PASS END=183995753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:13,0 chr2 183995754 . G . PASS END=183995771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 183995772 . C . PASS END=183995772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 183995773 . A . PASS END=183995779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 183995780 . A . PASS END=183995794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 183998294 . C . PASS END=183998315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,182,255:40,0 chr2 183998316 . G . PASS END=183998351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:93:63:0,93,1395:0,134,255:40,0 chr2 184016236 . G . PASS END=184016377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:42:0,103,1575:0,103,255:40,0 chr2 184022172 . G . PASS END=184022241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:47:0,120,1800:0,122,255:40,0 chr2 184023011 . A . PASS END=184023139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:28:0,84,999:0,84,255:40,0 chr2 184024216 . A . PASS END=184024380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:34:0,99,1421:0,102,255:40,0 chr2 184025782 . G . PASS END=184025796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:85:0,120,1800:0,234,255:40,0 chr2 184025797 . C . PASS END=184025859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:80:0,120,1800:0,221,255:40,0 chr2 185461056 . T . PASS END=185461098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,2:95:99:89:0,120,1800:0,217,255:40,0 chr2 185461099 . T . PASS END=185461103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,1:88:99:87:0,120,1800:0,245,255:40,0 chr2 185462995 . C . PASS END=185462995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 185462996 . T . PASS END=185462996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 185462997 . T . PASS END=185463007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 185463008 . C . PASS END=185463008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 185463009 . C . PASS END=185463011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 185463012 . C . PASS END=185463012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 185463013 . T . PASS END=185463019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 185463020 . T . PASS END=185463020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 185463021 . G . PASS END=185463029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 185463030 . G . PASS END=185463033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 185463034 . C . PASS END=185463041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:9:0,18,270:0,27,255:6,0 chr2 185463042 . C . PASS END=185463045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 185463046 . G . PASS END=185463082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr2 185463083 . G . PASS END=185463086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 185463087 . T . PASS END=185463119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,55:0,6,55:3,0 chr2 185463120 . C T, 41.45 PASS DP=2;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,2,0:1.000,0.000:2:0,1,0:0,1,0:5:77,6,0,77,6,77:78,6,0:0,0:4.1449e+01,4.7781e+00,1.7587e+00,7.6219e+01,3.9548e+01,7.9219e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,0,1,1:0,0,0,2 chr2 185463121 . G . PASS END=185463157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,55:0,6,55:3,0 chr2 185463158 . G . PASS END=185463187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:9:3:0,9,94:0,9,94:3,0 chr2 185463188 . C . PASS END=185463193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 185463194 . C . PASS END=185463197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,111:3,0 chr2 185463198 . G . PASS END=185463210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,125:0,12,125:4,0 chr2 185463211 . G . LowGQ END=185463223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:0:4:0,0,55:0,0,60:3,0 chr2 185463224 . C . PASS END=185463224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,125:0,12,125:4,0 chr2 185463225 . T . PASS END=185463322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,72:0,9,72:3,0 chr2 185463323 . G . PASS END=185463332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:5,0 chr2 185463333 . G . PASS END=185463344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr2 185463345 . C . PASS END=185463354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 185463355 . C . PASS END=185463376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,266:0,21,255:9,0 chr2 185463377 . G . PASS END=185463402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 185463403 . C . PASS END=185463403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 185463404 . C . PASS END=185463426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 185463427 . G . PASS END=185463429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 185463430 . C . PASS END=185463435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 185463436 . C . PASS END=185463447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 185463524 . C . PASS END=185463535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:9:0,27,319:0,27,255:9,0 chr2 185463536 . C . PASS END=185463536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 185463537 . A . PASS END=185463545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 185463546 . G . PASS END=185463546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 185463547 . T . PASS END=185463578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 185463579 . C . PASS END=185463579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 185463580 . C . PASS END=185463580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 185463581 . C . PASS END=185463591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr2 185463592 . T . PASS END=185463592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 185463593 . T . PASS END=185463608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 185463609 . C . PASS END=185463611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 185463612 . G . PASS END=185463644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,398:0,33,255:12,0 chr2 185463645 . C . PASS END=185463645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 185463646 . G . PASS END=185463678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 185463679 . G . PASS END=185463679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 185463680 . C . PASS END=185463689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 185463690 . G . PASS END=185463691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 185463692 . G . PASS END=185463719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 185463720 . C . PASS END=185463739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr2 185463740 . T . PASS END=185463743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 185463744 . A . PASS END=185463769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr2 185463770 . T . PASS END=185463770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,541:0,7,255:15,0 chr2 185463771 . C . PASS END=185463772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 185463773 . C . PASS END=185463784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,630:0,41,255:17,0 chr2 185463785 . G . PASS END=185463797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 185731096 . G . PASS END=185731233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:36:0,81,1215:0,108,255:40,0 chr2 185731234 . A . PASS END=185731239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:28:0,60,900:0,84,255:24,0 chr2 185778428 . A . PASS END=185778428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 185798330 . A . PASS END=185798460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:84:37:0,84,1260:0,88,255:40,0 chr2 185800510 . T . PASS END=185800867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,107,1480:0,107,255:40,1 chr2 185800868 . A . PASS END=185800904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,117,1721:0,117,255:40,0 chr2 185800905 . A T, 222.72 PASS DP=59;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,24,0:0,35,0:173:260,176,0,2136,176,2136:255,177,0:0,0:2.2272e+02,1.7272e+02,0.0000e+00,4.5000e+02,2.0749e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,23:0,0,27,32 chr2 185800906 . A . PASS END=185800942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,141,255:40,0 chr2 185800943 . A . PASS END=185801707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:52:0,109,1775:0,109,255:40,1 chr2 185801708 . G . PASS END=185801746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:64:0,120,1800:0,162,255:40,0 chr2 185801747 . G A, 247.26 PASS DP=67;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,67,0:1.000,0.000:67:0,31,0:0,36,0:197:285,200,0,2478,200,2478:255,201,0:0,0:2.4726e+02,1.9726e+02,0.0000e+00,4.5000e+02,2.3203e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,34:0,0,33,34:185801747 chr2 185801748 . A . PASS END=185801754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,200,255:40,0 chr2 185801755 . A G, 272.72 PASS DP=75;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,75,0:1.000,0.000:75:0,36,0:0,39,0:223:310,226,0,2892,226,2892:255,226,0:0,0:2.7272e+02,2.2272e+02,0.0000e+00,4.5000e+02,2.5749e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,39,36:0,0,46,29:185801747 chr2 185801756 . G . PASS END=185801794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:78:0,120,1800:0,180,255:40,2 chr2 185801795 . A . PASS END=185802167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:67:0,111,1665:0,177,255:40,1 chr2 185802168 . A . PASS END=185802183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:84:63:0,84,1260:0,162,255:39,0 chr2 185802184 . C . PASS END=185802188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:60:64:0,60,900:0,175,255:24,0 chr2 185802189 . C . PASS END=185802197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:42:63:0,42,630:0,162,255:18,0 chr2 185802198 . A . PASS END=185802201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:30:63:0,30,450:0,189,255:12,0 chr2 185802202 . T . PASS END=185802202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:15:64:0,15,225:0,193,255:5,0 chr2 185802203 . A . PASS END=185802210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:3:63:0,3,45:0,79,255:1,0 chr2 185802211 . C CACA, 239.61 PASS DP=65;MQ=249.68;FractionInformativeReads=0.985 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,29,0:0,35,0:190:272,193,0,2838,193,2838:255,0,254:0,74:2.3961e+02,1.8961e+02,0.0000e+00,4.5000e+02,2.2442e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,32,32:0,0,35,29 chr2 185802212 . A . LowGQ END=185802212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:14,50:64:0:64:0,0,0:255,0,255:40,0 chr2 185802213 . C . PASS END=185802215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,157,255:40,1 chr2 185802216 . T . LowGQ END=185802216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,9:65:0:65:0,0,1695:154,0,255:40,0 chr2 185802217 . A . PASS END=185802217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 185802218 . C . LowGQ END=185802218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,6:64:0:64:0,0,1917:32,0,255:40,0 chr2 185802219 . T . PASS END=185802219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 185802220 . T . LowGQ END=185802220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,6:65:0:65:0,0,1804:16,0,255:40,0 chr2 185802221 . T . PASS END=185802221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,5:64:21:64:0,21,2041:0,21,255:40,0 chr2 185802222 . T . PASS END=185802242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,152,255:40,0 chr2 185802243 . C A, 208.60 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,26,0:0,28,0:159:246,162,0,1993,162,1993:255,162,0:0,0:2.0860e+02,1.5860e+02,0.0000e+00,4.5000e+02,1.9337e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,31:0,0,33,21 chr2 185802244 . A . PASS END=185802280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,117,1800:0,117,255:40,0 chr2 185802281 . A . PASS END=185802325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,116,1800:0,116,255:40,0 chr2 185802326 . G . PASS END=185802362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:48:0,92,1721:0,92,255:40,0 chr2 185802363 . A G, 193.08 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,31,0:0,18,0:143:231,146,0,1788,146,1788:255,147,0:0,0:1.9308e+02,1.4308e+02,0.0000e+00,4.5000e+02,1.7785e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,21:0,0,24,25 chr2 185802364 . C . PASS END=185802400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,139,255:40,0 chr2 185802401 . T . PASS END=185803753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:31:0,81,1105:0,82,255:40,0 chr2 186603622 . A . PASS END=186603648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1194:0,83,255:37,0 chr2 186603649 . A . PASS END=186603720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1305:0,95,255:40,0 chr2 186604073 . G . PASS END=186604077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr2 186604078 . G . PASS END=186604078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 186604079 . C . PASS END=186604090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr2 186604091 . T . PASS END=186604091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr2 186604092 . T . PASS END=186604094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1172:0,93,255:31,0 chr2 186604095 . C . PASS END=186604095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 186604096 . A . PASS END=186604134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1135:0,82,255:33,0 chr2 186604135 . G . PASS END=186604135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 186604136 . G . PASS END=186604140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 186604141 . G . PASS END=186604141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 186604142 . C . PASS END=186604146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 186604147 . T . PASS END=186604147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 186604148 . G . PASS END=186604155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1019:0,87,255:29,0 chr2 186604156 . A . PASS END=186604168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,872:0,64,255:26,0 chr2 186604169 . G . PASS END=186604194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:16,0 chr2 186604195 . A . PASS END=186604196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 186604197 . A . PASS END=186604197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr2 186604198 . G . PASS END=186604198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 186607860 . C . PASS END=186607865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1032:0,87,255:30,0 chr2 186607866 . C . PASS END=186607866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 186607867 . G . PASS END=186608021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:90:30:0,90,1111:0,90,255:40,0 chr2 186609049 . G . PASS END=186609138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:53:0,120,1800:0,159,255:40,0 chr2 186610156 . A . PASS END=186610295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:50:0,120,1800:0,134,255:40,0 chr2 186611396 . A . PASS END=186611528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,110,1454:0,110,255:40,0 chr2 186611529 . A . PASS END=186611537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,105,1575:0,110,255:40,0 chr2 186612040 . G . PASS END=186612123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:82:0,120,1800:0,216,255:40,0 chr2 186612124 . A . PASS END=186612150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,169,255:40,0 chr2 186618449 . A . PASS END=186618575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:69:0,120,1800:0,183,255:40,0 chr2 186620919 . C . PASS END=186621005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:67:0,120,1800:0,171,255:40,0 chr2 186625715 . G . PASS END=186625716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,201,255:40,0 chr2 186625717 . C . PASS END=186625732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:72:0,120,1800:0,182,255:40,0 chr2 186625733 . C . PASS END=186625769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:78:0,120,1800:0,199,255:40,0 chr2 186625770 . A G, 49.54 PASS DP=84;MQ=250.00;MQRankSum=7.866;ReadPosRankSum=5.193;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,39,0:0.464,0.000:84:24,24,0:21,15,0:48:84,0,50,1366,1599,2965:255,0,255:40,0:4.9537e+01,7.0152e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,23,21,18:25,20,18,21 chr2 186625771 . A . PASS END=186625807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:79:0,120,1800:0,210,255:40,0 chr2 186625808 . A . PASS END=186625830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,158,255:40,0 chr2 186626699 . A . PASS END=186626744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:89:0,120,1800:0,252,255:40,0 chr2 186627910 . G . PASS END=186627942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,136,255:40,0 chr2 186627943 . T C, 46.36 PASS DP=74;MQ=250.00;MQRankSum=7.187;ReadPosRankSum=1.415;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,29,0:0.397,0.000:73:27,15,0:17,14,0:46:81,0,50,1029,1570,2599:255,0,255:40,0:4.6360e+01,1.2218e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,24,18,11:23,21,22,7 chr2 186627944 . T . PASS END=186627980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,195,255:40,0 chr2 186627981 . G . PASS END=186628016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:70:0,120,1800:0,209,255:40,0 chr2 186629229 . A . PASS END=186629292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,120,1800:0,174,255:40,0 chr2 186647432 . G . PASS END=186647452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:75:0,120,1800:0,222,255:40,0 chr2 186647453 . A . PASS END=186647453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,12:91:51:91:0,51,2355:0,51,255:40,0 chr2 186647454 . C . PASS END=186647489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:88:0,120,1800:0,202,255:40,0 chr2 186650979 . G . PASS END=186651015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:75:0,120,1800:0,209,255:40,0 chr2 186653370 . G . PASS END=186654554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:48:0,117,1755:0,123,255:40,0 chr2 186654555 . C . PASS END=186654591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,135,255:40,0 chr2 186654592 . A G, 50.00 PASS DP=64;MQ=250.00;MQRankSum=6.865;ReadPosRankSum=0.121;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,33,0:0.516,0.000:64:16,16,0:15,17,0:48:85,0,50,1164,1100,2264:255,0,255:28,0:5.0000e+01,6.5492e-05,5.2920e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,13,15,18:21,10,14,19 chr2 186654593 . T . PASS END=186654614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:57:0,120,1800:0,134,255:40,0 chr2 186654615 . A . PASS END=186654615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,8:57:37:57:0,37,1328:0,37,255:40,0 chr2 186654616 . C . PASS END=186654629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,138,255:40,0 chr2 186654630 . G . PASS END=186654829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:44:0,108,1637:0,108,255:40,2 chr2 186654830 . T . PASS END=186654866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,120,255:40,0 chr2 186654867 . G C, 48.09 PASS DP=54;MQ=250.00;MQRankSum=6.228;ReadPosRankSum=4.671;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,23,0:0.426,0.000:54:17,9,0:14,14,0:47:83,0,50,823,1085,1907:255,0,255:29,0:4.8087e+01,8.9308e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,16,7:15,16,12,11 chr2 186654868 . A . PASS END=186654904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,119,1800:0,119,255:40,0 chr2 186654905 . T . PASS END=186655688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:40:0,92,1423:0,92,255:40,0 chr2 186655689 . T . PASS END=186655725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:69:0,120,1800:0,177,255:40,0 chr2 186655726 . G A, 266.24 PASS DP=73;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,73,0:1.000,0.000:73:0,43,0:0,30,0:216:304,219,0,2784,219,2784:255,220,0:0,0:2.6624e+02,2.1624e+02,0.0000e+00,4.5000e+02,2.5101e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,40:0,0,35,38 chr2 186655727 . A . PASS END=186655763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:64:0,120,1800:0,182,255:40,0 chr2 186655764 . A . PASS END=186656619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:97:49:0,97,1723:0,97,255:40,1 chr2 186656620 . T . PASS END=186656656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:51:0,103,1682:0,103,255:40,0 chr2 186656657 . C T, 49.98 PASS DP=61;MQ=249.37;MQRankSum=6.701;ReadPosRankSum=3.282;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,30,0:0.492,0.000:61:16,18,0:15,12,0:48:85,0,50,1057,1072,2129:255,0,255:29,0:4.9983e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,14,14,16:20,11,18,12 chr2 186656658 . G . PASS END=186656694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:60:0,120,1800:0,164,255:40,0 chr2 186656695 . A . PASS END=186656918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:60:0,120,1800:0,152,255:40,0 chr2 186656919 . A . PASS END=186656955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,165,255:40,1 chr2 186656956 . T C, 50.00 PASS DP=70;MQ=250.00;MQRankSum=7.162;ReadPosRankSum=3.779;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:32,38,0:0.543,0.000:70:18,13,0:14,25,0:48:85,0,49,1301,1092,2393:255,0,255:30,0:5.0000e+01,6.8339e-05,5.2400e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,20,23,15:12,20,16,22 chr2 186656957 . G . PASS END=186656993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,195,255:40,0 chr2 186656994 . A . PASS END=186657051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,2:71:99:65:0,120,1800:0,172,255:40,0 chr2 186657052 . A . PASS END=186657088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:72:0,120,1800:0,168,255:40,1 chr2 186657089 . C A, 50.00 PASS DP=76;MQ=250.00;MQRankSum=7.439;ReadPosRankSum=5.127;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,39,0:0.520,0.000:75:16,14,0:20,25,0:48:85,0,50,1387,1172,2559:255,0,255:33,0:5.0000e+01,6.6269e-05,5.2808e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,17,28,11:19,17,13,26 chr2 186657090 . C . PASS END=186657126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:77:0,120,1800:0,213,255:40,0 chr2 186657127 . A . PASS END=186658018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:44:0,99,1598:0,99,255:40,0 chr2 186658019 . A . PASS END=186658055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:65:0,120,1800:0,139,255:40,0 chr2 186658056 . G A, 49.98 PASS DP=70;MQ=250.00;MQRankSum=7.135;ReadPosRankSum=2.539;FractionInformativeReads=0.986;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,34,0:0.493,0.000:69:17,14,0:18,20,0:48:85,0,50,1187,1223,2411:255,0,255:32,0:4.9982e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,19,20,14:18,17,20,14 chr2 186658057 . A . PASS END=186658093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,180,255:40,0 chr2 186658094 . C . PASS END=186658400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:63:0,120,1800:0,174,255:40,0 chr2 186658401 . C . PASS END=186658437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,146,255:40,0 chr2 186658438 . C T, 45.97 PASS DP=59;MQ=250.00;MQRankSum=6.427;ReadPosRankSum=1.593;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,23,0:0.390,0.000:59:20,9,0:16,14,0:45:81,0,50,823,1229,2052:255,0,255:30,0:4.5967e+01,1.3176e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,21,14,9:21,15,10,13 chr2 186658439 . G . PASS END=186658475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:55:0,116,1800:0,116,255:40,0 chr2 186658476 . T . PASS END=186658527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,134,255:40,0 chr2 186658528 . C . PASS END=186658564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,119,1800:0,119,255:40,0 chr2 186658565 . G T, 49.70 PASS DP=68;MQ=250.00;MQRankSum=7.071;ReadPosRankSum=2.230;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,32,0:0.471,0.000:68:19,16,0:17,16,0:48:84,0,50,1114,1259,2373:255,0,255:35,0:4.9704e+01,6.8339e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,15,19,13:18,18,21,11 chr2 186658566 . A . PASS END=186658602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,178,255:40,0 chr2 186658603 . A . PASS END=186659321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:59:0,120,1800:0,141,255:40,0 chr2 186659322 . G . PASS END=186659358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:66:0,120,1800:0,172,255:40,0 chr2 186659359 . G T, 49.04 PASS DP=77;MQ=249.24;MQRankSum=7.454;ReadPosRankSum=4.142;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,34,0:0.447,0.000:76:23,13,0:19,21,0:48:84,0,50,1209,1498,2707:255,0,255:37,0:4.9038e+01,7.5847e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,20,18,16:23,19,21,13 chr2 186659360 . G . PASS END=186659396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,197,255:40,0 chr2 186659397 . G . PASS END=186659888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:87:42:0,87,1468:0,87,255:40,0 chr2 186659889 . T . PASS END=186659889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1417:0,79,255:37,0 chr2 186659890 . T . PASS END=186661529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:83:41:0,83,1620:0,83,255:40,0 chr2 186661530 . C . PASS END=186661566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,123,255:40,0 chr2 186661567 . G A, 48.64 PASS DP=53;MQ=250.00;MQRankSum=6.182;ReadPosRankSum=2.468;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,23,0:0.434,0.000:53:13,11,0:17,12,0:47:83,0,50,815,1007,1822:255,0,255:27,0:4.8636e+01,8.1283e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,13,10:17,13,13,10 chr2 186661568 . T . PASS END=186661604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:51:0,120,1800:0,123,255:40,0 chr2 186661605 . G . PASS END=186661635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,103,1654:0,103,255:40,0 chr2 186661636 . T . PASS END=186661672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:43:0,105,1507:0,105,255:40,0 chr2 186661673 . A G, 50.00 PASS DP=42;MQ=250.00;MQRankSum=5.534;ReadPosRankSum=3.648;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,21,0:0.500,0.000:42:10,12,0:11,9,0:48:85,0,50,751,751,1502:255,0,255:21,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,15,9,12:13,8,12,9 chr2 186661674 . C . PASS END=186661710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,106,1551:0,106,255:40,0 chr2 186661711 . C . PASS END=186662240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:88:38:0,88,1238:0,88,255:40,2 chr2 186662241 . T . PASS END=186662241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:33,0 chr2 186662242 . T . PASS END=186662252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1260:0,105,255:34,0 chr2 186662253 . G . PASS END=186662253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 186664424 . T . PASS END=186664435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,120,1800:0,126,255:40,0 chr2 186664436 . A . PASS END=186664472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:51:0,120,1800:0,135,255:40,0 chr2 186664473 . T C, 47.80 PASS DP=76;MQ=250.00;MQRankSum=7.401;ReadPosRankSum=4.824;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,32,0:0.421,0.000:76:19,15,0:25,17,0:47:83,0,50,1092,1537,2629:255,0,255:40,0:4.7803e+01,9.3708e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:26,18,22,10:21,23,15,17 chr2 186664474 . G . PASS END=186664510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:75:0,120,1800:0,204,255:40,0 chr2 186664511 . C . PASS END=186664925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:53:0,120,1800:0,126,255:40,1 chr2 186664926 . C . PASS END=186664962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,146,255:40,0 chr2 186664963 . C A, 31.14 PASS DP=62;MQ=250.00;MQRankSum=6.028;ReadPosRankSum=4.955;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,17,0:0.274,0.000:62:22,11,0:23,6,0:31:66,0,50,551,1533,2084:255,0,255:40,0:3.1142e+01,3.3618e-03,5.3003e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:27,18,12,5:18,27,10,7 chr2 186664964 . T . PASS END=186665000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:57:0,120,1800:0,140,255:40,0 chr2 186665001 . C . PASS END=186665394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,131,255:40,0 chr2 186665395 . T . PASS END=186665431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,147,255:40,0 chr2 186665432 . G A, 50.00 PASS DP=63;MQ=250.00;MQRankSum=6.771;ReadPosRankSum=5.125;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,35,0:0.556,0.000:63:12,19,0:16,16,0:48:85,0,49,1207,1001,2208:255,0,255:27,0:5.0000e+01,7.0928e-05,5.1982e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,16,19:15,13,20,15 chr2 186665433 . A . PASS END=186665469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:62:0,120,1800:0,182,255:40,0 chr2 186665470 . T . PASS END=186665786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,139,255:40,0 chr2 186665787 . T . PASS END=186665823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:74:0,120,1800:0,212,255:40,0 chr2 186665824 . A G, 50.00 PASS DP=79;MQ=249.73;MQRankSum=7.594;ReadPosRankSum=4.811;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:35,44,0:0.557,0.000:79:17,24,0:18,20,0:48:85,0,49,1574,1225,2798:255,0,255:29,0:5.0000e+01,7.1705e-05,5.1870e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,20,20,24:19,16,24,20 chr2 186665825 . A . PASS END=186665861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,180,255:40,0 chr2 186665862 . T . PASS END=186667083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:47:0,110,1790:0,110,255:40,1 chr2 186667084 . A . PASS END=186667120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:74:0,120,1800:0,187,255:40,0 chr2 186667121 . T C, 50.00 PASS DP=74;MQ=250.00;MQRankSum=7.395;ReadPosRankSum=5.600;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,37,0:0.500,0.000:74:17,21,0:20,16,0:48:85,0,50,1270,1315,2586:255,0,255:37,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,24,15,22:19,18,17,20 chr2 186667122 . T . PASS END=186667158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,187,255:40,0 chr2 186667159 . T . PASS END=186668897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:56:0,108,1800:0,108,255:40,0 chr2 186668898 . G . PASS END=186668934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,162,255:40,0 chr2 186668935 . A G, 46.67 PASS DP=70;MQ=250.00;MQRankSum=7.043;ReadPosRankSum=3.447;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:42,28,0:0.400,0.000:70:24,18,0:18,10,0:46:81,0,50,992,1427,2419:255,0,255:35,0:4.6673e+01,1.1519e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,21,12,16:25,17,14,14 chr2 186668936 . T . PASS END=186668972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,139,255:40,0 chr2 186668973 . A . PASS END=186670066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:96:51:0,96,1800:0,96,255:40,0 chr2 186670067 . A . PASS END=186670103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,166,255:40,0 chr2 186670104 . A C, 267.86 PASS DP=74;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,74,0:1.000,0.000:74:0,30,0:0,44,0:218:306,221,0,2720,221,2720:255,222,0:0,0:2.6786e+02,2.1786e+02,0.0000e+00,4.5000e+02,2.5263e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,47:0,0,43,31 chr2 186670105 . C . PASS END=186670141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,171,255:40,0 chr2 186670142 . A . PASS END=186670742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,120,255:40,2 chr2 186670743 . A . PASS END=186670779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,187,255:40,0 chr2 186670780 . T A, 46.92 PASS DP=87;MQ=249.38;MQRankSum=7.344;ReadPosRankSum=2.610;FractionInformativeReads=0.989;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:52,34,0:0.395,0.000:86:27,19,0:25,15,0:45:82,0,47,182,182,182:255,0,255:40,0:4.6920e+01,1.3176e-04,5.0000e+01,1.8169e+02,2.1646e+02,1.8470e+02:0.00,34.77,37.78,34.77,69.54,37.78:30,22,22,12:23,29,13,21 chr2 186670781 . A . PASS END=186670817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:75:0,120,1800:0,187,255:40,0 chr2 186670818 . T . PASS END=186670941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:80:0,100,1800:0,100,255:40,0 chr2 186670942 . A . PASS END=186670978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:76:0,120,1800:0,182,255:40,0 chr2 186670979 . T C, 279.45 PASS DP=78;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,78,0:1.000,0.000:78:0,40,0:0,38,0:229:317,232,0,2854,232,2854:255,237,0:0,0:2.7945e+02,2.2945e+02,0.0000e+00,4.5000e+02,2.6422e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,44:0,0,44,34 chr2 186670980 . T . PASS END=186671016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:78:0,120,1800:0,185,255:40,0 chr2 186671017 . A . PASS END=186671319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,130,255:40,1 chr2 186671320 . A . PASS END=186671356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:73:0,120,1800:0,202,255:40,0 chr2 186671357 . G A, 47.00 PASS DP=73;MQ=250.00;MQRankSum=7.226;ReadPosRankSum=4.232;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,30,0:0.411,0.000:73:29,15,0:14,15,0:46:82,0,50,978,1500,2478:255,0,255:35,0:4.6996e+01,1.0846e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,20,14,16:21,22,19,11 chr2 186671358 . A . PASS END=186671394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,166,255:40,0 chr2 186671395 . G . PASS END=186671874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:98:49:0,98,1776:0,98,255:40,1 chr2 186671875 . A . PASS END=186671911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:69:0,120,1800:0,176,255:40,0 chr2 186671912 . G A, 49.75 PASS DP=74;MQ=250.00;MQRankSum=7.384;ReadPosRankSum=0.585;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:39,35,0:0.473,0.000:74:20,20,0:19,15,0:48:85,0,50,1199,1366,2564:255,0,255:36,0:4.9747e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,20,12,23:22,17,17,18 chr2 186671913 . T . PASS END=186671949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:64:0,120,1800:0,182,255:40,0 chr2 186671950 . T . PASS END=186672859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,118,1800:0,118,255:40,2 chr2 186672860 . G . PASS END=186672896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:63:0,120,1800:0,179,255:40,0 chr2 186672897 . A G, 50.00 PASS DP=67;MQ=250.00;MQRankSum=6.948;ReadPosRankSum=3.561;FractionInformativeReads=0.985;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,36,0:0.545,0.000:66:11,17,0:19,19,0:48:85,0,49,1230,1072,2302:255,0,255:28,0:5.0000e+01,6.8598e-05,5.2372e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,13,25,11:12,18,18,18 chr2 186672898 . A . PASS END=186672934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:60:0,120,1800:0,142,255:40,0 chr2 186672935 . A . PASS END=186673860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:52:0,118,1800:0,118,255:40,1 chr2 186678272 . G . PASS END=186678284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,173,255:40,0 chr2 186678285 . A . PASS END=186678760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:80:32:0,80,1185:0,80,255:40,1 chr2 186678761 . C . PASS END=186678769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:22,0 chr2 186680098 . A . PASS END=186680198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:57:0,114,1800:0,114,255:40,0 chr2 186689161 . T . PASS END=186689207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:75:0,120,1800:0,207,255:40,0 chr2 186692883 . A . PASS END=186692905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,1:104:99:102:0,120,1800:0,255,255:40,0 chr2 186692906 . G . PASS END=186692926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,2:101:99:95:0,120,1800:0,212,255:40,0 chr2 186696540 . T . PASS END=186696609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:71:0,120,1800:0,197,255:40,0 chr2 186697817 . A . PASS END=186697838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:54:0,120,1800:0,152,255:40,0 chr2 186697839 . C . PASS END=186697875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,180,255:40,0 chr2 186697876 . A G, 272.73 PASS DP=75;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,75,0:1.000,0.000:75:0,41,0:0,34,0:223:311,226,0,2899,226,2899:255,226,0:0,0:2.7273e+02,2.2273e+02,0.0000e+00,4.5000e+02,2.5750e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,37:0,0,38,37 chr2 186697877 . C . PASS END=186697913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:75:0,120,1800:0,181,255:40,0 chr2 186697914 . T . PASS END=186697953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,141,255:40,0 chr2 187351110 . A . PASS END=187351132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:26,0 chr2 187351133 . G . PASS END=187351138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 187351139 . G . PASS END=187351139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 187351140 . G . PASS END=187351157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1023:0,84,255:29,0 chr2 187351158 . C . PASS END=187351158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 187351159 . A . PASS END=187351166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1070:0,87,255:29,0 chr2 187351167 . A . PASS END=187351184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,881:0,62,255:26,0 chr2 187359960 . G . PASS END=187360061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:60:0,120,1800:0,172,255:40,0 chr2 187364346 . G . PASS END=187364389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:95:50:0,95,1610:0,95,255:40,0 chr2 187364909 . G . PASS END=187364915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,170,255:40,0 chr2 187364916 . A . PASS END=187365020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:58:0,120,1800:0,140,255:40,0 chr2 187366000 . G . PASS END=187366152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:43:0,116,1635:0,116,255:40,0 chr2 187367223 . A . PASS END=187367314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:66:0,120,1800:0,181,255:40,0 chr2 187368759 . G . PASS END=187368904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:42:0,100,1660:0,100,255:40,0 chr2 187368905 . A . PASS END=187368941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:40:0,103,1182:0,103,255:40,0 chr2 187370178 . C . PASS END=187370324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:46:0,111,1665:0,138,255:40,0 chr2 187370467 . A . PASS END=187370568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,111,1665:0,127,255:40,0 chr2 187371440 . G . PASS END=187371563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:92:36:0,92,1386:0,92,255:40,0 chr2 187372122 . A . PASS END=187372126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,366:0,33,255:12,0 chr2 187372127 . A . PASS END=187372127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 187372128 . G . PASS END=187372128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 187372129 . A . PASS END=187372129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 187372130 . C . PASS END=187372155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,645:0,48,255:18,0 chr2 187372156 . A . PASS END=187372156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 187372157 . T . PASS END=187372158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,674:0,54,255:18,0 chr2 187372159 . T . PASS END=187372159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 187372160 . G . PASS END=187372168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,645:0,54,255:18,0 chr2 187372169 . A . PASS END=187372169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 187372170 . A . PASS END=187372197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,607:0,51,255:18,0 chr2 187372198 . T . PASS END=187372201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,34,255:14,0 chr2 187373270 . A . PASS END=187373448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:33:0,81,1103:0,85,255:40,0 chr2 187373449 . T . PASS END=187373450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,96,255:26,0 chr2 187373451 . A . PASS END=187373452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 187373453 . A . PASS END=187373460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr2 187455066 . A . PASS END=187455088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:13,0 chr2 187455089 . G . PASS END=187455133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr2 187455134 . C . PASS END=187455135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 187455136 . T . PASS END=187455162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:30,0 chr2 187455163 . T . PASS END=187455164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 187455165 . G . PASS END=187455202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:35,0 chr2 187455203 . A . PASS END=187455203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:33,0 chr2 187455204 . A . PASS END=187455236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1133:0,80,255:34,0 chr2 187455237 . C . PASS END=187455237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1108:0,41,255:29,0 chr2 187455238 . C . PASS END=187455238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:30,0 chr2 187455239 . C . PASS END=187455240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:30:0,75,1125:0,80,255:25,0 chr2 187455241 . G . PASS END=187455248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 187455249 . T . PASS END=187455249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:26,0 chr2 187455250 . C . PASS END=187455250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 187465062 . A . PASS END=187465062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:96:48:0,96,1440:0,96,255:40,0 chr2 187465063 . T . PASS END=187465063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:39:48:0,39,1352:0,39,255:40,0 chr2 187465064 . G . PASS END=187465064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:55:48:0,55,1355:0,55,255:40,0 chr2 187465065 . C . PASS END=187465067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,124,255:40,0 chr2 187465068 . C . PASS END=187465070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,105,1553:0,105,255:40,0 chr2 187465071 . G . PASS END=187465071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1535:0,78,255:40,0 chr2 187465072 . G . PASS END=187465074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,111,1524:0,111,255:40,0 chr2 187465075 . C . PASS END=187465075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,7:49:31:49:0,31,1355:0,31,255:40,0 chr2 187465076 . C . PASS END=187465077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr2 187465078 . T . PASS END=187465078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,5:50:45:50:0,45,1512:0,45,255:40,0 chr2 187465079 . C . PASS END=187465087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:49:0,84,1590:0,84,255:40,0 chr2 187465088 . C . PASS END=187465088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:72:48:0,72,1545:0,72,255:40,0 chr2 187465089 . C . PASS END=187465097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:89:47:0,89,1480:0,89,255:40,0 chr2 187465098 . T . PASS END=187465098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:30:47:0,30,1346:0,30,255:40,0 chr2 187465099 . T . PASS END=187465108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,99,1496:0,99,255:40,0 chr2 187466748 . C . PASS END=187466870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:30:0,83,1186:0,83,255:40,0 chr2 187466871 . T . PASS END=187466873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr2 187466874 . A . PASS END=187466877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1155:0,80,255:29,0 chr2 187466878 . G . PASS END=187466878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:26,0 chr2 187487066 . G . PASS END=187487122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:48:0,120,1800:0,135,255:40,0 chr2 187487123 . G . PASS END=187487157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:56:0,120,1800:0,155,255:40,0 chr2 187490200 . G . PASS END=187490314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:41:0,93,1390:0,93,255:40,0 chr2 187495524 . A . PASS END=187495585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:90:0,120,1800:0,254,255:40,0 chr2 187498056 . G . PASS END=187498069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:97:0,120,1800:0,255,255:40,0 chr2 187498070 . T . PASS END=187498101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:90:0,120,1800:0,221,255:40,0 chr2 187500809 . G . PASS END=187500934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,121,255:40,0 chr2 187501792 . G . PASS END=187501836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,186,255:40,0 chr2 187503004 . A . PASS END=187503047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:78:0,120,1800:0,213,255:40,0 chr2 187503136 . G . PASS END=187503188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,161,255:40,0 chr2 187503189 . G . PASS END=187503192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,204,255:40,0 chr2 187505642 . A . PASS END=187505694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:77:0,120,1800:0,215,255:40,0 chr2 187506113 . T . PASS END=187506315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:35:0,93,1395:0,101,255:40,0 chr2 187511413 . A . PASS END=187511413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 187511414 . T . PASS END=187511414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:27,0 chr2 187511415 . A . PASS END=187511415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,991:0,71,255:28,0 chr2 187511416 . T . PASS END=187511416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 187511417 . T . PASS END=187511417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr2 187511418 . G . PASS END=187511418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:30,0 chr2 187511419 . C . PASS END=187511568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:31:0,82,1103:0,82,255:40,0 chr2 187511569 . A . PASS END=187511575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:26,0 chr2 187511576 . C . PASS END=187511577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr2 187511578 . C . PASS END=187511581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:21,0 chr2 187511582 . T . PASS END=187511582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 187511583 . A . PASS END=187511584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 187511585 . A . PASS END=187511587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr2 187511588 . C . PASS END=187511592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 187511593 . A . PASS END=187511593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 187511594 . T . PASS END=187511595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 187511596 . G . PASS END=187511604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 187514567 . A . PASS END=187514612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,130,255:40,0 chr2 187516709 . G . PASS END=187516714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1286:0,92,255:35,0 chr2 187516715 . A . PASS END=187516716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:36:0,75,1144:0,75,255:37,0 chr2 187516717 . C . PASS END=187516816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:38:0,93,1346:0,93,255:40,0 chr2 187519377 . T . PASS END=187519435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:72:0,120,1800:0,200,255:40,0 chr2 187520974 . A . PASS END=187520984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1105:0,82,255:33,0 chr2 187520985 . G . PASS END=187520985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1056:0,66,255:31,0 chr2 187520986 . A . PASS END=187521098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1166:0,94,255:40,0 chr2 187521099 . C . PASS END=187521104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:30:0,72,1080:0,74,255:25,0 chr2 187521105 . G . PASS END=187521112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:54:26:0,54,810:0,74,255:19,0 chr2 187521113 . G . PASS END=187521113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:19,0 chr2 187521114 . A . PASS END=187521128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr2 187523765 . G . PASS END=187523902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:48:0,114,1710:0,127,255:40,0 chr2 187528495 . G . PASS END=187528562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:65:0,120,1800:0,180,255:40,0 chr2 187529221 . T . PASS END=187529228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1080:0,90,255:30,0 chr2 187529229 . A . PASS END=187529229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 187529230 . G . PASS END=187529230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 187529231 . A . PASS END=187529231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:29,0 chr2 187529232 . A . PASS END=187529233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 187529234 . A . PASS END=187529234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,961:0,79,255:29,0 chr2 187529235 . T . PASS END=187529368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:31:0,90,1296:0,93,255:40,0 chr2 187529853 . G . PASS END=187529869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:55:0,113,1800:0,113,255:40,0 chr2 187529870 . C . PASS END=187529945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:57:0,120,1800:0,125,255:40,0 chr2 187531431 . C . PASS END=187531510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,109,1790:0,109,255:40,0 chr2 187531877 . C . PASS END=187531907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:75:0,120,1800:0,214,255:40,0 chr2 187531908 . G . PASS END=187531957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:79:0,120,1800:0,226,255:40,0 chr2 187532398 . A . PASS END=187532416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,153,255:40,0 chr2 187532417 . G A, 244.24 PASS DP=66;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,41,0:0,25,0:194:282,197,0,2428,197,2428:255,198,0:0,0:2.4424e+02,1.9424e+02,0.0000e+00,4.5000e+02,2.2901e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,31:0,0,32,34 chr2 187532418 . T . PASS END=187532454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,190,255:40,0 chr2 187532455 . C . PASS END=187532503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:64:0,120,1800:0,188,255:40,0 chr2 187533489 . C . PASS END=187533647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:40:0,81,1359:0,81,255:40,0 chr2 187534428 . A . PASS END=187534442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,146,255:40,0 chr2 187534443 . A . PASS END=187534443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:70:53:0,70,1504:0,70,255:40,0 chr2 187534444 . C . PASS END=187534525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:42:0,87,1305:0,90,255:40,0 chr2 187534526 . A . PASS END=187534526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1329:0,78,255:29,0 chr2 187534527 . G . PASS END=187534532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,94,255:29,0 chr2 187534533 . C . PASS END=187534541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:25,0 chr2 187540331 . G . PASS END=187540444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:38:0,108,1620:0,114,255:40,0 chr2 187540547 . A . PASS END=187540675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:42:0,113,1590:0,113,255:40,0 chr2 187541540 . G . PASS END=187541662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:42:0,110,1504:0,110,255:40,0 chr2 187541924 . A . PASS END=187542019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,162,255:40,0 chr2 187558901 . A . PASS END=187558922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1047:0,84,255:32,0 chr2 187558923 . T . PASS END=187558926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1210:0,96,255:35,0 chr2 187558927 . C . PASS END=187558927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr2 187558928 . T . PASS END=187558959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1195:0,92,255:36,0 chr2 187558960 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=0.465;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:9,14,0:8,9,0:48:85,0,48,794,600,1393:255,0,255:15,0:5.0000e+01,7.6623e-05,5.1156e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,4,14,9:7,10,13,10 chr2 187558961 . C . PASS END=187558997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,92,255:35,0 chr2 187558998 . A . PASS END=187558998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:78:41:0,78,1170:0,123,255:26,0 chr2 187558999 . A . PASS END=187558999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:42:0,81,1215:0,126,255:27,0 chr2 187559000 . C . PASS END=187559006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:66:39:0,66,990:0,104,255:26,0 chr2 187559007 . G . PASS END=187559024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:42:38:0,42,630:0,91,255:18,0 chr2 187559025 . T . PASS END=187559028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:33:46:0,33,495:0,72,255:11,0 chr2 187559029 . ACAG A,ACAGCAG, 49.20 PASS DP=46;MQ=249.66;FractionInformativeReads=0.891 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:25,0,16,0:0.000,0.390,0.000:41:13,0,11,0:12,0,5,0:47:69,585,632,0,770,47,870,870,870,870:255,0,255:6,21:4.9204e+01,4.5000e+02,4.5000e+02,9.5520e-05,4.5000e+02,5.0000e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,20.00,23.01,20.00,40.00,23.01,34.77,54.77,54.77,37.78:10,15,9,7:14,11,6,10 chr2 187559030 . C . LowGQ END=187559030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,14:48:0:48:0,0,790:255,0,255:25,0 chr2 187559031 . A . PASS END=187559038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:75:46:0,75,1125:0,138,255:26,0 chr2 187559039 . C . PASS END=187559046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:47:0,81,1215:0,112,255:33,1 chr2 187559047 . GCAA G,GCAACAA,GCAGCAACAA,ACAA, 50.00 PASS DP=51;MQ=249.69;FractionInformativeReads=0.843 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:23,0,19,0,1,0:0.000,0.442,0.000,0.023,0.000:43:16,0,9,0,1,0:7,0,10,0,0,0:47:72,861,698,0,629,46,301,649,294,348,613,1421,599,617,660,1521,1521,1521,1521,1521,1521:255,0,255:25,24:5.0000e+01,4.5000e+02,4.5000e+02,9.5520e-05,4.5000e+02,4.9204e+01,3.0122e+02,4.5000e+02,3.1597e+02,3.5122e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,22.00,25.01,22.00,44.00,25.01,22.00,44.00,44.00,25.01,34.77,56.77,56.77,56.77,37.78,34.77,56.77,56.77,56.77,69.54,37.78:14,9,8,12:13,10,10,10 chr2 187559048 . C . LowGQ END=187559048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,16:52:0:52:0,0,731:255,0,255:40,0 chr2 187559049 . A . PASS END=187559090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,113,1800:0,113,255:40,1 chr2 187559091 . A . PASS END=187559130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:34:0,83,972:0,83,255:40,0 chr2 187559131 . G . PASS END=187559131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:28,0 chr2 187559132 . G . PASS END=187559132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 187559133 . T . PASS END=187559138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:32:0,60,1125:0,60,255:25,0 chr2 187604955 . T . PASS END=187604955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1340:0,59,255:36,0 chr2 187604956 . G . PASS END=187605188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:97:40:0,97,1460:0,97,255:40,0 chr2 187608210 . T . PASS END=187608302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,0:108:99:91:0,120,1800:0,245,255:40,0 chr2 187611819 . A . PASS END=187611977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:53:0,120,1800:0,159,255:40,0 chr2 187615861 . G . PASS END=187616031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:51:0,99,1485:0,139,255:40,0 chr2 187618660 . G . PASS END=187618776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:91:36:0,91,1227:0,91,255:40,1 chr2 187625840 . G . PASS END=187625963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:68:0,120,1800:0,197,255:40,0 chr2 187626206 . G . PASS END=187626287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,173,255:40,0 chr2 187626288 . A . PASS END=187626337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:68:0,120,1800:0,177,255:40,0 chr2 187626338 . C T, 49.71 PASS DP=68;MQ=250.00;MQRankSum=7.071;ReadPosRankSum=0.829;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,32,0:0.471,0.000:68:16,17,0:20,15,0:48:84,0,50,1135,1286,2422:255,0,255:34,0:4.9712e+01,6.8081e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:25,11,17,15:15,21,14,18 chr2 187626339 . A . PASS END=187626388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:57:0,120,1800:0,149,255:40,0 chr2 187626389 . G . PASS END=187627201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:81:35:0,81,1215:0,85,255:40,2 chr2 187627202 . G . PASS END=187627202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:31,0 chr2 187627203 . A . PASS END=187627216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1252:0,91,255:37,0 chr2 187627217 . A . PASS END=187627217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:33,0 chr2 187627218 . A . PASS END=187627550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:37:0,81,1164:0,81,255:40,0 chr2 187692711 . T . PASS END=187692721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1263:0,89,255:38,0 chr2 187692722 . C . PASS END=187692722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1181:0,67,255:32,0 chr2 187692723 . T . PASS END=187693517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:90:39:0,90,1336:0,90,255:40,0 chr2 187694454 . C . PASS END=187694454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr2 187694455 . T . PASS END=187694607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:31:0,87,1305:0,93,255:40,0 chr2 187697847 . C . PASS END=187697959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:76:0,120,1800:0,195,255:40,0 chr2 187698673 . C . PASS END=187698757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:66:0,120,1800:0,182,255:40,0 chr2 187702033 . T . PASS END=187702269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:33:0,84,1236:0,97,255:40,0 chr2 187702270 . C . PASS END=187702277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:26,0 chr2 187702278 . A . PASS END=187702281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:18,0 chr2 187703686 . C . PASS END=187703896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:89:35:0,89,1236:0,89,255:40,0 chr2 187709444 . A . PASS END=187709448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:115:0,120,1800:0,255,255:40,0 chr2 187709449 . T . PASS END=187709484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,0:125:99:121:0,120,1800:0,255,255:40,0 chr2 187712446 . C . PASS END=187712522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,135,255:40,0 chr2 187713612 . C . PASS END=187713618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 187713619 . C . PASS END=187713619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,563:0,21,255:15,0 chr2 187713620 . A . PASS END=187713623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:20,0 chr2 187713624 . G . PASS END=187713635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:23,0 chr2 187713636 . G . PASS END=187713636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 187713637 . G . PASS END=187713646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 187713647 . T . PASS END=187713647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 187713648 . G . PASS END=187713697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,847:0,62,255:26,0 chr2 187713698 . A . PASS END=187713723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,950:0,81,255:30,0 chr2 187713724 . C . PASS END=187713724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 187713725 . T . PASS END=187713732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1096:0,90,255:31,0 chr2 187713733 . A . PASS END=187713733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 187713734 . A . PASS END=187713763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1141:0,82,255:33,0 chr2 187713764 . A . PASS END=187713764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:27,0 chr2 187713765 . G . PASS END=187713769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:28,0 chr2 187713770 . T . PASS END=187713771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 187713772 . C . PASS END=187713772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 187713773 . T . PASS END=187713773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 187713774 . A . PASS END=187713781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 187713782 . C . PASS END=187713792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:28:0,63,945:0,70,255:26,0 chr2 187713793 . T . PASS END=187713793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:20,0 chr2 187713794 . G . PASS END=187713799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 187713800 . T . PASS END=187713800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,729:0,14,255:21,0 chr2 187713801 . G . PASS END=187713805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 187713806 . T . PASS END=187713806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,702:0,33,255:16,0 chr2 187713807 . C . PASS END=187713818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,630:0,40,255:18,0 chr2 187713819 . T . PASS END=187713819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:15,0 chr2 187713820 . C . PASS END=187713820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 187713821 . T . PASS END=187713821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 187713822 . T . PASS END=187713833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 187713834 . G . PASS END=187713835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 187713836 . C . PASS END=187713843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr2 187713844 . C . PASS END=187713845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:14:0,27,405:0,42,255:9,0 chr2 187713846 . T . LowGQ END=187713847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,349:6,0,255:9,0 chr2 187713848 . G . PASS END=187713848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 187713849 . G . LowGQ END=187713849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr2 187713850 . C . PASS END=187713857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 188210911 . T . PASS END=188210912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr2 188210913 . A . PASS END=188210913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 188210914 . A . PASS END=188210917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1050:0,90,255:30,0 chr2 188210918 . T . PASS END=188210918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 188210919 . A . PASS END=188210919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 188210920 . T . PASS END=188210920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 188210921 . A . PASS END=188210924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 188210925 . T . PASS END=188210925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 188210926 . T . PASS END=188210927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 188210928 . C . PASS END=188210928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 188210929 . T . PASS END=188210946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,991:0,87,255:30,0 chr2 188210947 . T . PASS END=188210947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 188210948 . T . PASS END=188210948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 188210949 . C . PASS END=188210949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 188210950 . A . PASS END=188210951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 188210952 . T . PASS END=188210952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:29,0 chr2 188210953 . A . PASS END=188210962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr2 188210963 . C . PASS END=188210963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 188210964 . T . PASS END=188210966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 188210967 . T . PASS END=188210967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 188210968 . T . PASS END=188211126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:31:0,83,1202:0,83,255:40,0 chr2 188216647 . C . PASS END=188216688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:95:0,120,1800:0,246,255:40,2 chr2 188216841 . C . PASS END=188216844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,137,255:40,0 chr2 188216845 . A . PASS END=188217059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:90:35:0,90,1349:0,95,255:40,0 chr2 188223790 . C . PASS END=188223856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:64:0,120,1800:0,143,255:40,0 chr2 188223939 . T . PASS END=188223967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:88:0,120,1800:0,231,255:40,0 chr2 188223968 . G . PASS END=188223999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:63:0,120,1800:0,176,255:40,0 chr2 188225325 . C . PASS END=188225478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:36:0,93,1395:0,108,255:40,0 chr2 188228103 . A . PASS END=188228229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:91:50:0,91,1785:0,91,255:40,0 chr2 188243667 . T . PASS END=188243758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,170,255:40,0 chr2 188245194 . C . PASS END=188245306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,126,255:40,0 chr2 188245404 . C . PASS END=188245514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1279:0,89,255:40,0 chr2 188247900 . C . PASS END=188248022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:32:0,82,1255:0,82,255:40,0 chr2 188248023 . T . PASS END=188248023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 188248024 . A . PASS END=188248030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1164:0,93,255:31,0 chr2 188248031 . A . PASS END=188248032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 188250272 . C . PASS END=188250300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:92:0,120,1800:0,214,255:40,0 chr2 188250301 . T A, 330.60 PASS DP=95;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,95,0:1.000,0.000:95:0,51,0:0,44,0:281:368,284,0,3505,284,3505:255,255,0:0,0:3.3060e+02,2.8060e+02,0.0000e+00,4.4853e+02,3.1537e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,55:0,0,40,55 chr2 188250302 . C . PASS END=188250338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:95:0,120,1800:0,252,255:40,0 chr2 188250339 . A . PASS END=188250355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:86:0,120,1800:0,234,255:40,0 chr2 188331663 . T . PASS END=188331769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:95:0,120,1800:0,192,255:40,0 chr2 188332480 . C . PASS END=188332654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:80:32:0,80,1133:0,80,255:40,0 chr2 188332655 . A . PASS END=188332659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 188343403 . T . PASS END=188343459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:50:0,120,1800:0,134,255:40,0 chr2 188343460 . G . PASS END=188343496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:68:0,120,1800:0,191,255:40,0 chr2 188343497 . T C, 250.73 PASS DP=68;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,68,0:1.000,0.000:68:0,36,0:0,32,0:201:289,204,0,2567,204,2567:255,204,0:0,0:2.5073e+02,2.0073e+02,0.0000e+00,4.5000e+02,2.3550e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,40:0,0,36,32 chr2 188343498 . T . PASS END=188343530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:48:0,120,1800:0,123,255:40,0 chr2 188348851 . C . PASS END=188348943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:32:0,90,1350:0,96,255:40,0 chr2 188349538 . G . PASS END=188349714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:39:0,102,1457:0,104,255:40,0 chr2 188353064 . C . PASS END=188353102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,4:110:99:103:0,120,1800:0,247,255:40,0 chr2 188361608 . C . PASS END=188361805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:51:0,120,1800:0,153,255:40,0 chr2 188368375 . C . PASS END=188368495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:40:0,120,1466:0,120,255:40,0 chr2 189342430 . A . PASS END=189342457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,111,1546:0,111,255:40,0 chr2 189348158 . A . PASS END=189348219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:93:0,120,1800:0,224,255:40,0 chr2 189356271 . A . PASS END=189356321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,0:117:99:99:0,120,1800:0,255,255:40,0 chr2 189364391 . A . PASS END=189364396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,3:112:99:112:0,120,1800:0,255,255:40,0 chr2 189387483 . T . PASS END=189387554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:80:0,120,1800:0,196,255:40,0 chr2 189393824 . T . PASS END=189393922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,125,255:40,0 chr2 189405908 . G . PASS END=189406146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:87:31:0,87,1305:0,93,255:40,1 chr2 189406147 . G . PASS END=189406150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1108:0,74,255:26,0 chr2 189433966 . G . PASS END=189434082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,107,1399:0,107,255:40,0 chr2 189434347 . A . PASS END=189434370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:41:0,111,1651:0,116,255:40,0 chr2 189434755 . A . PASS END=189434847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:82:0,120,1800:0,204,255:40,0 chr2 189447068 . C . PASS END=189447271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1310:0,81,255:40,0 chr2 189447272 . A . PASS END=189447272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1191:0,72,255:31,0 chr2 189447273 . G . PASS END=189447275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1350:0,95,255:31,0 chr2 189447276 . G . PASS END=189447292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:22:0,60,900:0,66,255:25,0 chr2 189448992 . G . PASS END=189449113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:43:0,102,1530:0,116,255:40,0 chr2 189449114 . T . PASS END=189449121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:75:38:0,75,1125:0,114,255:26,0 chr2 189449122 . C . PASS END=189449130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 189452582 . A . PASS END=189452802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:54:0,120,1800:0,151,255:40,0 chr2 189453378 . T . PASS END=189453440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:89:0,120,1800:0,255,255:40,0 chr2 189454467 . C . PASS END=189454477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:91:0,120,1800:0,255,255:40,0 chr2 189458667 . G . PASS END=189458738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,141,255:40,0 chr2 189599333 . T . PASS END=189599647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:54:0,120,1800:0,127,255:40,0 chr2 189839115 . G . PASS END=189839115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 189839206 . A . PASS END=189839206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1335:0,95,255:34,0 chr2 189839216 . A . PASS END=189839216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1486:0,74,255:40,0 chr2 189839217 . T . PASS END=189839294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:42:0,80,1543:0,80,255:40,0 chr2 189849485 . G . PASS END=189849486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 189849487 . T . PASS END=189849487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:16,0 chr2 189849488 . G . PASS END=189849495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,778:0,63,255:22,0 chr2 189849496 . A . PASS END=189849497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,767:0,50,255:23,0 chr2 189849498 . G . PASS END=189849501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,876:0,72,255:24,0 chr2 189849502 . T . PASS END=189849502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 189849503 . T . PASS END=189849506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,864:0,75,255:25,0 chr2 189849507 . A . PASS END=189849508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,991:0,87,255:29,0 chr2 189849509 . C . PASS END=189849509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 189849510 . T . PASS END=189849689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:87:29:0,87,1078:0,87,255:40,1 chr2 189849701 . A . PASS END=189849701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 189849923 . C . PASS END=189849973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:38:0,101,1421:0,101,255:40,0 chr2 189849977 . A . PASS END=189849977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 189850389 . A . PASS END=189850389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr2 189850391 . G . PASS END=189850397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,861:0,69,255:26,0 chr2 189850398 . C . PASS END=189850471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,992:0,81,255:36,0 chr2 189850472 . G . PASS END=189850472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:32,0 chr2 189850473 . G . PASS END=189850474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 189850475 . A . PASS END=189850475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1221:0,72,255:32,0 chr2 189850476 . T . PASS END=189850501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1210:0,86,255:34,0 chr2 189850502 . C . PASS END=189850505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 189851779 . C . PASS END=189851779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 189851784 . G . PASS END=189851865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:55:0,120,1800:0,165,255:40,0 chr2 189851870 . G . PASS END=189851870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 189852802 . T . PASS END=189852802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 189852807 . G . PASS END=189852861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:35:0,99,1457:0,104,255:40,0 chr2 189852865 . G . PASS END=189852866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,111,1665:0,114,255:37,0 chr2 189853309 . T . PASS END=189853309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 189853316 . G . PASS END=189853370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,100,1248:0,100,255:40,0 chr2 189853374 . G . PASS END=189853374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,102,1530:0,126,255:34,0 chr2 189854122 . G . PASS END=189854177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:43:0,113,1573:0,113,255:40,0 chr2 189854820 . A . PASS END=189854820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 189854822 . G . PASS END=189854875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:97:45:0,97,1629:0,97,255:40,0 chr2 189855026 . T . PASS END=189855026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 189855033 . G . PASS END=189855087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:75:0,120,1800:0,221,255:40,0 chr2 189855730 . G . PASS END=189855783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:73:0,120,1800:0,188,255:40,0 chr2 189855785 . T . PASS END=189855785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,208,255:40,0 chr2 189856213 . G . PASS END=189856258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:84:0,120,1800:0,235,255:40,0 chr2 189856261 . A . PASS END=189856261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 189856381 . A . PASS END=189856381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:72:0,120,1800:0,199,255:40,0 chr2 189856393 . A . PASS END=189856454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,117,1755:0,180,255:40,0 chr2 189856910 . G . PASS END=189856956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:72:0,120,1800:0,210,255:40,0 chr2 189857603 . A . PASS END=189857603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 189857611 . A . PASS END=189857666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:33:0,93,1249:0,99,255:40,0 chr2 189858087 . G . PASS END=189858166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1211:0,88,255:37,0 chr2 189858167 . T . PASS END=189858186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr2 189858190 . G . PASS END=189858190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 189858751 . T . PASS END=189858751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 189858763 . G . PASS END=189858809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:97:48:0,97,1433:0,97,255:40,0 chr2 189858957 . T . PASS END=189858957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 189858960 . G . PASS END=189858992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:97:37:0,97,1200:0,97,255:40,0 chr2 189858993 . A . PASS END=189858993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:36,0 chr2 189858994 . T . PASS END=189859022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:37:0,88,1485:0,88,255:37,0 chr2 189859023 . G . PASS END=189859025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:33,0 chr2 189859026 . G . PASS END=189859041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1215:0,102,255:34,0 chr2 189859042 . G . PASS END=189859045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:71:29:0,71,1047:0,71,255:26,0 chr2 189859046 . G . PASS END=189859047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 189859048 . G . PASS END=189859050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:25,0 chr2 189859051 . G . PASS END=189859051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 189859052 . T . PASS END=189859052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 189859053 . G . PASS END=189859053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,969:0,40,255:24,0 chr2 189859054 . G . PASS END=189859058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:25,0 chr2 189859264 . T . PASS END=189859264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 189859266 . G . PASS END=189859321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:53:0,120,1800:0,134,255:40,0 chr2 189859323 . A . PASS END=189859323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 189859325 . G . PASS END=189859326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,177,255:40,0 chr2 189859434 . CT C,CTT, 50.00 PASS DP=45;MQ=250.00;MQRankSum=5.527;ReadPosRankSum=-0.751;FractionInformativeReads=0.956;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,22,3,0:0.512,0.070,0.000:43:9,12,0,0:9,10,3,0:48:61,0,50,155,92,153,127,112,256,227:255,0,255:22,28:5.0000e+01,6.5233e-05,5.3000e+01,1.5505e+02,1.0311e+02,1.5611e+02,1.5043e+02,1.4638e+02,2.9055e+02,2.5415e+02:0.00,11.00,14.00,11.00,22.00,14.00,34.77,45.77,45.77,37.77:3,15,7,18:10,8,14,11 chr2 189859450 . G . PASS END=189859480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,99,1800:0,99,255:40,0 chr2 189859481 . C . PASS END=189859557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:62:0,120,1800:0,148,255:40,0 chr2 189859561 . C . PASS END=189859561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:99:73:0,120,1800:0,164,255:40,0 chr2 189859686 . A . PASS END=189859686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 189859757 . T . PASS END=189859758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 189859762 . T . PASS END=189859762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 189859772 . G . PASS END=189859825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,109,1446:0,109,255:40,0 chr2 189859827 . T . PASS END=189859827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 189859829 . G . PASS END=189859829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 189860410 . C . PASS END=189860410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 189860418 . G . PASS END=189860438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,898:0,61,255:26,0 chr2 189860439 . G . PASS END=189860446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1147:0,90,255:30,0 chr2 189860447 . C . PASS END=189860447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 189860448 . C . PASS END=189860451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 189860452 . C . PASS END=189860452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,995:0,63,255:27,0 chr2 189860453 . A . PASS END=189860475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1216:0,83,255:33,0 chr2 189860476 . A . PASS END=189860476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:30,0 chr2 189860477 . A . PASS END=189860487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 189860488 . A . PASS END=189860488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:29,0 chr2 189860489 . T . PASS END=189860493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr2 189860494 . T . PASS END=189860494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 189860495 . C . PASS END=189860496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 189860497 . C . PASS END=189860497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr2 189860498 . T . PASS END=189860506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 189860507 . A . PASS END=189860516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1015:0,71,255:26,0 chr2 189860834 . T . PASS END=189860834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 189860840 . C . PASS END=189860840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1211:0,99,255:33,0 chr2 189860849 . A . PASS END=189860849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 189860851 . G . PASS END=189860905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:36:0,105,1435:0,108,255:40,0 chr2 189860908 . T . PASS END=189860908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 189860918 . T . PASS END=189860918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1380:0,108,255:36,0 chr2 189861124 . G . PASS END=189861126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 189861127 . A . PASS END=189861128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 189861129 . T . PASS END=189861136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,884:0,61,255:24,0 chr2 189861137 . A . PASS END=189861138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr2 189861139 . A . PASS END=189861154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,914:0,62,255:25,0 chr2 189861155 . C . PASS END=189861157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 189861158 . C . PASS END=189861158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:31,0 chr2 189861159 . T . PASS END=189861181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:32,0 chr2 189861182 . A . PASS END=189861182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:28,0 chr2 189861183 . G . PASS END=189861187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:28,0 chr2 189861188 . G . PASS END=189861216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,937:0,62,255:25,0 chr2 189861217 . A . PASS END=189861217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:21,0 chr2 189861218 . A . PASS END=189861222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 189861224 . T . PASS END=189861224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 189861227 . G . PASS END=189861228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:22,0 chr2 189861233 . T . PASS END=189861233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 189861889 . A . PASS END=189861889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1465:0,114,255:38,0 chr2 189861891 . G . PASS END=189861944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,100,1462:0,100,255:40,0 chr2 189861949 . G . PASS END=189861949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,111,1665:0,138,255:37,0 chr2 189862062 . G . PASS END=189862116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:33:0,80,1260:0,80,255:40,0 chr2 189862118 . A . PASS END=189862118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 189862120 . G . PASS END=189862121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 189862424 . A . PASS END=189862424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 189862426 . G . PASS END=189862480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:45:0,102,1529:0,102,255:40,0 chr2 189862482 . A . PASS END=189862482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1520:0,110,255:40,0 chr2 189862982 . T . PASS END=189862982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 189862984 . C . PASS END=189862984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:34,0 chr2 189862992 . G . PASS END=189863045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,120,1800:0,129,255:40,0 chr2 189863047 . T . PASS END=189863047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,140,255:40,0 chr2 189863050 . G . PASS END=189863050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 189863391 . A . PASS END=189863391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1178:0,93,255:31,0 chr2 189863399 . G . PASS END=189863426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1278:0,92,255:36,0 chr2 189863427 . G . PASS END=189863444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1280:0,102,255:35,0 chr2 189863446 . T . PASS END=189863446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr2 189863448 . G . PASS END=189863448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 189863450 . A . PASS END=189863450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 189864010 . G . PASS END=189864014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 189864015 . A . PASS END=189864042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:23,0 chr2 189864043 . T . PASS END=189864052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 189864053 . G . PASS END=189864079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,980:0,81,255:32,0 chr2 189864080 . G A, 43.10 PASS DP=32;MQ=250.00;MQRankSum=4.563;ReadPosRankSum=3.214;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,11,0:0.344,0.000:32:8,5,0:13,6,0:43:78,0,50,393,751,1144:255,0,255:18,0:4.3098e+01,2.3453e-04,5.3000e+01,3.9342e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,8,10,1:8,13,6,5 chr2 189864081 . C . PASS END=189864110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:36,0 chr2 189864195 . G . PASS END=189864293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:34:0,84,1260:0,86,255:40,0 chr2 189864294 . G . PASS END=189864300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:26,0 chr2 189864301 . A . PASS END=189864304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:54:29:0,54,810:0,59,255:21,0 chr2 189864568 . G . PASS END=189864581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,192,255:40,0 chr2 189864582 . T C, 49.19 PASS DP=73;MQ=249.87;MQRankSum=7.310;ReadPosRankSum=4.395;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,33,0:0.452,0.000:73:23,18,0:17,15,0:48:84,0,50,1172,1431,2603:255,0,255:39,0:4.9195e+01,7.4034e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,19,14,19:24,16,15,18 chr2 189864583 . C . PASS END=189864619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:71:0,120,1800:0,183,255:40,0 chr2 189864620 . G . PASS END=189864622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,180,255:40,0 chr2 189866121 . A . PASS END=189866121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 189866123 . G . PASS END=189866132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,945:0,65,255:26,0 chr2 189866133 . G . PASS END=189866145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,972:0,84,255:29,0 chr2 189866146 . T . PASS END=189866146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr2 189866147 . C . PASS END=189866161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 189866162 . C . PASS END=189866165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 189866166 . C . PASS END=189866166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 189866167 . T . PASS END=189866178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,990:0,82,255:29,0 chr2 189866260 . A . PASS END=189866260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 189866262 . G . PASS END=189866315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,99,1485:0,111,255:40,0 chr2 189867016 . C . PASS END=189867016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 189867020 . T . PASS END=189867020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,175,255:40,0 chr2 189867022 . A . PASS END=189867022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 189867024 . G . PASS END=189867078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,126,255:40,0 chr2 189867082 . G . PASS END=189867082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 189867096 . A . PASS END=189867096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 189867671 . T . PASS END=189867671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 189867681 . G . PASS END=189867681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1035:0,76,255:30,0 chr2 189867682 . G . PASS END=189867791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:35:0,88,1197:0,88,255:40,0 chr2 189867793 . G . PASS END=189867793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1551:0,113,255:38,0 chr2 189867797 . C . PASS END=189867797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1372:0,90,255:35,0 chr2 189868136 . G . PASS END=189868190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,126,255:40,0 chr2 189868195 . G . PASS END=189868195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 189868458 . A . PASS END=189868458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 189868460 . G . PASS END=189868513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,152,255:40,0 chr2 189868708 . G . PASS END=189868718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 189868719 . A . PASS END=189868719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 189868720 . C . PASS END=189868724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 189868725 . A . PASS END=189868725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 189868726 . G . PASS END=189868733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 189868734 . C . PASS END=189868737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 189868738 . T . PASS END=189868738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 189868739 . C . PASS END=189868744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,751:0,47,255:19,0 chr2 189868745 . G . PASS END=189868751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 189868752 . T . PASS END=189868769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 189868770 . G . PASS END=189868775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 189868776 . C . PASS END=189868776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 189868777 . A . PASS END=189868777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 189868778 . C . PASS END=189868779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 189868780 . G . PASS END=189868781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:25,0 chr2 189868782 . T . PASS END=189868783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 189868784 . C . PASS END=189868792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,953:0,75,255:26,0 chr2 189868793 . G . PASS END=189868793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 189868794 . C . PASS END=189868806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 189868807 . G . PASS END=189868809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 189868810 . C . PASS END=189868810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 189868811 . C . PASS END=189868817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 189868818 . T . PASS END=189868847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,832:0,61,255:26,0 chr2 189868848 . G . PASS END=189868848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr2 189868849 . C . PASS END=189868864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,900:0,61,255:25,0 chr2 189868865 . C . PASS END=189868870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,804:0,53,255:19,0 chr2 189868874 . G . PASS END=189868874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 189868982 . G . PASS END=189869038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:32,0 chr2 189869039 . A . PASS END=189869039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 189869040 . C . PASS END=189869053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 189869054 . A . PASS END=189869078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,861:0,69,255:23,0 chr2 189869079 . C . PASS END=189869087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,63,255:16,0 chr2 189869088 . A . PASS END=189869088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 189869089 . A . PASS END=189869089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr2 189869090 . G . PASS END=189869091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 189870074 . A . PASS END=189870074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 189870076 . G . PASS END=189870184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,108,1498:0,113,255:40,0 chr2 189870188 . G . PASS END=189870189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 189870335 . A . PASS END=189870335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 189870802 . T . PASS END=189870802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr2 189870932 . G . PASS END=189870988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:54:0,107,1755:0,107,255:40,0 chr2 189871061 . T . PASS END=189871061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 189871071 . G . PASS END=189871157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1474:0,93,255:40,0 chr2 189871158 . A . PASS END=189871158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1219:0,67,255:33,0 chr2 189871159 . G . PASS END=189871174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,96,255:35,0 chr2 189871175 . A . PASS END=189871178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,80,255:26,0 chr2 189871188 . C . PASS END=189871188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 189871658 . C . PASS END=189871658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 189871661 . A . PASS END=189871717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:48:0,120,1800:0,144,255:40,0 chr2 189871721 . G . PASS END=189871721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 189871726 . G . PASS END=189871726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 189872183 . T . PASS END=189872183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 189872222 . A . PASS END=189872222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 189872225 . G . PASS END=189872333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:45:0,93,1395:0,116,255:40,0 chr2 189872609 . A . PASS END=189872609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 189872611 . G . PASS END=189872611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 189872612 . G . PASS END=189872665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:25,0 chr2 189872667 . A . PASS END=189872667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 189872669 . G . PASS END=189872669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 189872756 . C . PASS END=189872756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 189872759 . A . PASS END=189872766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:25,0 chr2 189872767 . G . PASS END=189872767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 189872768 . T . PASS END=189872774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:25,0 chr2 189872775 . C . PASS END=189872863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1194:0,86,255:37,0 chr2 189872864 . C . PASS END=189872868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 189872871 . A . PASS END=189872871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 189873640 . C . PASS END=189873640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 189873650 . G . PASS END=189873653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 189873654 . C . PASS END=189873667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr2 189873668 . G . PASS END=189873675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 189873676 . A . PASS END=189873676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 189873677 . G . PASS END=189873689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,527:0,42,255:19,0 chr2 189873690 . C . PASS END=189873701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:23,0 chr2 189873702 . C . PASS END=189873702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 189873703 . T . PASS END=189873713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:26,0 chr2 189873714 . G . PASS END=189873858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,958:0,80,255:40,0 chr2 189873859 . A . PASS END=189873859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1127:0,71,255:32,0 chr2 189873860 . G . PASS END=189873885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:34:0,93,1282:0,94,255:37,0 chr2 189873886 . T . PASS END=189873886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr2 189873887 . C . PASS END=189873902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1238:0,92,255:36,0 chr2 189873903 . G . PASS END=189873903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:31,0 chr2 189873904 . A . PASS END=189873910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1260:0,96,255:30,0 chr2 189873911 . A . PASS END=189873933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,75,255:27,0 chr2 189873934 . T . PASS END=189873942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:23:0,45,675:0,69,255:17,0 chr2 189873943 . G . PASS END=189873948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:16:0,33,495:0,47,255:13,0 chr2 189874890 . T . PASS END=189874891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 189874893 . T . PASS END=189874893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 189874896 . C . PASS END=189874896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 189874904 . G . PASS END=189874910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:33:0,99,1249:0,99,255:40,0 chr2 189874911 . C . PASS END=189875092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:86:39:0,86,1350:0,86,255:40,0 chr2 189875372 . A . PASS END=189875372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,125,255:40,0 chr2 189875374 . T . PASS END=189875383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,120,1800:0,138,255:40,0 chr2 189875384 . G . PASS END=189875420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,133,255:40,0 chr2 189875421 . T G, 227.57 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,26,0:0,34,0:178:265,181,0,2286,181,2286:255,184,0:0,0:2.2757e+02,1.7757e+02,0.0000e+00,4.5000e+02,2.1234e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,35,25:0,0,31,29 chr2 189875422 . C . PASS END=189875458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,167,255:40,0 chr2 189875459 . A . PASS END=189875593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:39:0,81,1215:0,103,255:40,0 chr2 189875594 . C . PASS END=189875606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,77,255:24,0 chr2 189875607 . T . PASS END=189875616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:26:0,48,720:0,78,255:18,0 chr2 189875619 . A . PASS END=189875619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 189875626 . A . PASS END=189875626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 189876341 . T . PASS END=189876341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 189876343 . C . PASS END=189876343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 189876353 . G . PASS END=189876500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,105,1673:0,105,255:40,1 chr2 189876503 . C . PASS END=189876503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,214,255:40,0 chr2 189876572 . A . PASS END=189876572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,218,255:40,0 chr2 189876589 . G . PASS END=189876589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 189876613 . C . PASS END=189876613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 189876817 . C . PASS END=189876817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 189876825 . C . PASS END=189876825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr2 189876870 . A . PASS END=189876871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,169,255:40,0 chr2 189876906 . A . PASS END=189876906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:40,0 chr2 189876913 . T . PASS END=189876913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 189876967 . T . PASS END=189876967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,108,1620:0,110,255:36,0 chr2 189877008 . T . PASS END=189877008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1328:0,68,255:32,0 chr2 189877100 . G . PASS END=189877100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 189877125 . C . PASS END=189877125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 189877143 . G . PASS END=189877143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 189877192 . G . PASS END=189877192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 189877240 . A . PASS END=189877240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr2 189877318 . T . PASS END=189877318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 189877406 . C . PASS END=189877406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,117,1755:0,144,255:39,0 chr2 189877447 . C . PASS END=189877447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,105,1575:0,141,255:35,0 chr2 189896826 . A . PASS END=189896826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:65:0,120,1800:0,161,255:40,0 chr2 189896835 . A . PASS END=189896835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 189896902 . G . PASS END=189896902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 189897032 . C . PASS END=189897032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 189897128 . G . PASS END=189897128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 189897331 . C . PASS END=189897331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 189897336 . T . PASS END=189897336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 189897892 . T . PASS END=189897892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 189897948 . A . PASS END=189897948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 189898080 . T . PASS END=189898080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 189898098 . T . PASS END=189898098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,3:66:99:66:0,120,1800:0,149,255:40,0 chr2 189898205 . G . LowGQ END=189898205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,18:72:0:72:0,0,1424:255,0,255:40,22 chr2 189898395 . T . PASS END=189898395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 189898585 . A . PASS END=189898585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 189898670 . T . PASS END=189898670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:48:0,93,1395:0,144,255:31,0 chr2 189898796 . T . PASS END=189898942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:42:0,108,1665:0,108,255:40,0 chr2 189898948 . A . PASS END=189898948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 189899642 . A . PASS END=189899881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:37:0,101,1376:0,101,255:40,0 chr2 189899895 . G . PASS END=189899895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,117,1755:0,132,255:39,0 chr2 189901342 . C . PASS END=189901529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:31:0,80,1148:0,80,255:40,0 chr2 189903998 . C . PASS END=189904021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:26,0 chr2 189904022 . G . PASS END=189904228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:30:0,80,1125:0,80,255:40,0 chr2 189904229 . C . PASS END=189904239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1125:0,69,255:26,0 chr2 189904240 . T . PASS END=189904240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:26,0 chr2 189904241 . G . PASS END=189904241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 189904242 . G . PASS END=189904256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:25,0 chr2 189904257 . A . PASS END=189904277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr2 189904278 . A . PASS END=189904289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:14:0,39,585:0,42,255:13,0 chr2 189906298 . C . PASS END=189906298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 189906300 . T . PASS END=189906300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 189906312 . C . PASS END=189906325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,684:0,44,255:19,0 chr2 189906326 . C . PASS END=189906326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 189906327 . T . PASS END=189906327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 189906328 . C . PASS END=189906336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 189906337 . C . PASS END=189906337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 189906338 . C . PASS END=189906342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:23,0 chr2 189906343 . A . PASS END=189906343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 189906344 . C . PASS END=189906369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,870:0,62,255:26,0 chr2 189906370 . G . PASS END=189906377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 189906378 . G . PASS END=189906378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 189906379 . T . PASS END=189906389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:27,0 chr2 189906390 . A . PASS END=189906390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 189906391 . C . PASS END=189906394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 189906395 . A . PASS END=189906407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr2 189906408 . G . PASS END=189906419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,54,255:18,0 chr2 189907404 . A . PASS END=189907404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 189907446 . T . PASS END=189907499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:63:0,120,1800:0,159,255:40,0 chr2 189907869 . T . PASS END=189907869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 189907874 . T . PASS END=189907874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 189907877 . A . PASS END=189907899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,117,1755:0,123,255:40,0 chr2 189907900 . G . PASS END=189907936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,159,255:40,0 chr2 189907937 . A G, 211.15 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,26,0:0,29,0:161:249,164,0,2037,164,2037:255,165,0:0,0:2.1115e+02,1.6115e+02,0.0000e+00,4.5000e+02,1.9592e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,21:0,0,19,36 chr2 189907938 . C . PASS END=189907974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,114,1710:0,134,255:40,0 chr2 189907975 . C . PASS END=189907984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,117,1506:0,120,255:40,0 chr2 189909903 . A . PASS END=189909903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 189909905 . A . PASS END=189909958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:52:0,120,1800:0,121,255:40,0 chr2 189909961 . A . PASS END=189909961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,123,255:40,0 chr2 189910525 . C . PASS END=189910541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,756:0,63,255:22,0 chr2 189910542 . C . PASS END=189910542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 189910543 . C . PASS END=189910608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,784:0,63,255:25,0 chr2 189910609 . C . PASS END=189910618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:17,0 chr2 189910619 . G . PASS END=189910629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:13,0 chr2 189910630 . C . PASS END=189910633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:8,0 chr2 189912921 . G . PASS END=189912921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 189912935 . A . PASS END=189912988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:61:0,120,1800:0,183,255:40,0 chr2 189912990 . T . PASS END=189912990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 189914072 . C . PASS END=189914076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 189914077 . G . PASS END=189914077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 189914078 . G . PASS END=189914078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 189914079 . T . PASS END=189914079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr2 189914080 . C . PASS END=189914089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,886:0,72,255:25,0 chr2 189914090 . C . PASS END=189914180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1070:0,84,255:38,0 chr2 189914188 . A . PASS END=189914188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 189915295 . C . PASS END=189915312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,811:0,69,255:26,0 chr2 189915313 . G . PASS END=189915377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1012:0,80,255:31,0 chr2 189915378 . C . PASS END=189915391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:25:0,66,990:0,75,255:25,0 chr2 189915392 . C . PASS END=189915392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:22,0 chr2 189915393 . C . PASS END=189915402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 189916046 . A . PASS END=189916070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:22:0,62,865:0,62,255:26,0 chr2 189916071 . C . PASS END=189916073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:28,0 chr2 189916074 . T . PASS END=189916074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 189916075 . T . PASS END=189916076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 189916077 . T . PASS END=189916077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr2 189916078 . C . PASS END=189916145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1133:0,84,255:38,0 chr2 189916146 . C . PASS END=189916146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr2 189916147 . G . PASS END=189916158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr2 189916159 . G . PASS END=189916160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 189916161 . C . PASS END=189916163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 189916164 . T . PASS END=189916171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 189916172 . G . PASS END=189916172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:23,0 chr2 189916173 . G . PASS END=189916178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 189916179 . C . PASS END=189916179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 189916180 . C . PASS END=189916191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 189916192 . C . PASS END=189916197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr2 189916198 . C . PASS END=189916198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:15,0 chr2 189916199 . T . PASS END=189916203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:17,0 chr2 189916204 . C . PASS END=189916207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 189916898 . A . PASS END=189916951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,111,1682:0,111,255:40,0 chr2 189917471 . T . PASS END=189917471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 189917475 . A . PASS END=189917528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:54:0,120,1800:0,162,255:40,0 chr2 189917637 . A . PASS END=189917744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:29:0,82,1175:0,82,255:40,0 chr2 189918147 . T . PASS END=189918147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 189918150 . C . PASS END=189918203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:66:0,120,1800:0,169,255:40,0 chr2 189918611 . T . PASS END=189918611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1399:0,117,255:39,0 chr2 189918621 . A . PASS END=189918674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:47:0,111,1728:0,111,255:40,0 chr2 189918885 . C . PASS END=189918938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:42:0,88,1535:0,88,255:40,0 chr2 189918942 . T . PASS END=189918942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1352:0,100,255:37,0 chr2 189921694 . C . PASS END=189921694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 189921699 . T . PASS END=189921752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,216,255:40,0 chr2 189921762 . C . PASS END=189921762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 189922046 . T . PASS END=189922066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,114,1684:0,114,255:40,0 chr2 189922067 . A . PASS END=189922067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:59:49:0,59,1588:0,59,255:40,0 chr2 189922068 . G . PASS END=189922068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 189922069 . T . PASS END=189922086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,119,1786:0,119,255:40,0 chr2 189922087 . C . PASS END=189922087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,5:49:64:49:0,64,1601:0,64,255:40,0 chr2 189922088 . T . PASS END=189922148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:80:34:0,80,1215:0,80,255:40,0 chr2 189922149 . C . PASS END=189922153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 189923155 . T . PASS END=189923253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,117,1755:0,118,255:40,0 chr2 189923575 . T . PASS END=189923584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:63:0,120,1800:0,173,255:40,0 chr2 189923585 . A . PASS END=189923619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:87:71:0,87,1305:0,157,255:40,0 chr2 189925456 . T . PASS END=189925509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:60:0,120,1800:0,165,255:40,0 chr2 189926282 . G . PASS END=189926282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 189926285 . T . PASS END=189926285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:60:0,120,1800:0,164,255:40,0 chr2 189926287 . C . PASS END=189926341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:65:0,120,1800:0,152,255:40,0 chr2 189927587 . A . PASS END=189927587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 189927590 . C . PASS END=189927590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:27,0 chr2 189927591 . C . PASS END=189927591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1021:0,57,255:27,0 chr2 189927592 . G . PASS END=189927595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:31,0 chr2 189927596 . G . PASS END=189927596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1133:0,68,255:30,0 chr2 189927597 . G . PASS END=189927644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:35:0,82,1266:0,82,255:40,0 chr2 189927647 . A . PASS END=189927648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,117,1755:0,123,255:40,0 chr2 189927728 . A . PASS END=189927728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1590:0,116,255:40,0 chr2 189927736 . C . PASS END=189927789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,117,1755:0,133,255:40,0 chr2 189927898 . A . PASS END=189927996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:44:0,93,1485:0,93,255:40,0 chr2 189928700 . A . PASS END=189928700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 189928706 . C . PASS END=189928759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,156,255:40,0 chr2 189928762 . G . PASS END=189928762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 189929278 . C . PASS END=189929278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 189929283 . C . PASS END=189929284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 189929285 . G . PASS END=189929285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 189929286 . A . PASS END=189929320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:21,0 chr2 189929321 . G . PASS END=189929323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 189929324 . C . PASS END=189929346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 189929347 . G . PASS END=189929347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 189929348 . A . PASS END=189929350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 189929351 . A . PASS END=189929351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,673:0,46,255:20,0 chr2 189929352 . A . PASS END=189929358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 189929359 . G . PASS END=189929376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 189929377 . G . PASS END=189929381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:33:18:0,33,495:0,54,255:12,0 chr2 189929726 . T . PASS END=189929726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:80:0,120,1800:0,240,255:40,0 chr2 189929730 . C . PASS END=189929783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:74:0,120,1800:0,207,255:40,0 chr2 189931111 . T . PASS END=189931111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 189931116 . C . PASS END=189931218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:38:0,80,1336:0,80,255:40,0 chr2 189931219 . G . PASS END=189931219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr2 189931220 . G . PASS END=189931223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1350:0,81,255:33,0 chr2 189931455 . T . PASS END=189931508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:94:48:0,94,1800:0,94,255:40,0 chr2 189932741 . C . PASS END=189932743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 189932744 . T . PASS END=189932744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 189932745 . T . PASS END=189932761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 189932762 . A . PASS END=189932762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 189932763 . G . PASS END=189932793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1215:0,84,255:40,0 chr2 189932794 . C . PASS END=189932830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,126,255:40,0 chr2 189932831 . T C, 202.58 PASS DP=52;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,26,0:0,26,0:153:240,156,0,1933,156,1933:255,159,0:0,0:2.0258e+02,1.5258e+02,0.0000e+00,4.5000e+02,1.8735e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,20:0,0,28,24 chr2 189932832 . G . PASS END=189932839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,109,1667:0,109,255:40,0 chr2 189932952 . C . PASS END=189932996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:55:0,120,1800:0,144,255:40,0 chr2 189933507 . C . PASS END=189933507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,737:0,57,255:19,0 chr2 189933512 . A . PASS END=189933516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 189933517 . G . PASS END=189933520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 189933521 . T . PASS END=189933531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 189933532 . C . PASS END=189933535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 189933536 . A . PASS END=189933536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 189933537 . C . PASS END=189933537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 189933538 . C . PASS END=189933543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 189933544 . G . PASS END=189933546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 189933547 . C . PASS END=189933547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:20,0 chr2 189933548 . A . PASS END=189933568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,679:0,66,255:23,0 chr2 189933569 . A . PASS END=189933588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:19,0 chr2 189933589 . C . PASS END=189933606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:11:0,33,374:0,33,255:11,0 chr2 189933607 . C . PASS END=189933610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 189936766 . C . PASS END=189936819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:64:0,120,1800:0,166,255:40,0 chr2 189940119 . C . PASS END=189940163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:63:0,120,1800:0,166,255:40,0 chr2 189943242 . A . PASS END=189943295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,120,1800:0,145,255:40,0 chr2 189943303 . C . PASS END=189943304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,168,255:40,0 chr2 189943789 . C . PASS END=189943833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,120,1800:0,120,255:40,0 chr2 189944704 . C . PASS END=189944757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:44:0,105,1575:0,113,255:40,0 chr2 189945706 . T . PASS END=189945706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1219:0,88,255:34,0 chr2 189945716 . T . PASS END=189945769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,119,1637:0,119,255:40,0 chr2 189948710 . C . PASS END=189948763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,150,255:40,0 chr2 189948769 . T . PASS END=189948770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:56:0,120,1800:0,135,255:40,0 chr2 189949881 . C . PASS END=189949881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1327:0,108,255:36,0 chr2 189949886 . A . PASS END=189949891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1267:0,108,255:37,0 chr2 189949892 . C . PASS END=189949892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:33,0 chr2 189949893 . C . PASS END=189949933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,82,255:37,0 chr2 189949934 . C . PASS END=189949939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:25,0 chr2 189950438 . C . PASS END=189950438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 189950445 . C . PASS END=189950498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,180,255:40,0 chr2 189951447 . C . PASS END=189951447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 189951452 . T . PASS END=189951496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,143,255:40,0 chr2 189953421 . C . PASS END=189953498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:41:0,107,1504:0,107,255:40,0 chr2 189957036 . C . PASS END=189957129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1161:0,80,255:35,0 chr2 189957130 . T . PASS END=189957144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,70,255:25,0 chr2 189957145 . C . PASS END=189957145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 189957146 . C . PASS END=189957146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 189962003 . A . PASS END=189962056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:50:0,113,1800:0,113,255:40,0 chr2 189962059 . A . PASS END=189962059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 189963453 . T . PASS END=189963485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:59:0,120,1800:0,164,255:40,0 chr2 189964832 . C . PASS END=189964865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,1:110:99:106:0,120,1800:0,255,255:40,0 chr2 189968990 . C . PASS END=189969003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:94:0,120,1800:0,255,255:40,0 chr2 189974943 . A . PASS END=189974943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:18,0 chr2 189974950 . C . PASS END=189974957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,668:0,57,255:19,0 chr2 189974958 . G T, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,737,57,737:255,57,0:0,0:1.0418e+02,5.4185e+01,1.6567e-05,4.5000e+02,8.8955e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,7:0,0,11,8 chr2 189974959 . G . PASS END=189974963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:21,0 chr2 189974964 . G . PASS END=189974964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 189974965 . C . PASS END=189974995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,778:0,66,255:24,0 chr2 189974996 . A . PASS END=189975005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:25,0 chr2 189975006 . A . PASS END=189975006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:22,0 chr2 189975007 . G . PASS END=189975012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr2 189975013 . G . PASS END=189975175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:32:0,90,1227:0,96,255:40,0 chr2 190044234 . C . PASS END=190044330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:61:0,120,1800:0,134,255:40,0 chr2 190044506 . A . PASS END=190044506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 190306219 . A . PASS END=190306229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,101,1266:0,101,255:39,0 chr2 190306230 . G . PASS END=190306230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr2 190306231 . G . PASS END=190306304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:38:0,85,1374:0,85,255:40,0 chr2 190313105 . G . PASS END=190313234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,133,255:40,0 chr2 190313527 . G . PASS END=190313560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:76:0,120,1800:0,212,255:40,0 chr2 190313971 . T . PASS END=190313986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1271:0,89,255:35,0 chr2 190313987 . A . PASS END=190313987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:31,0 chr2 190313988 . G . PASS END=190314048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,100,1358:0,100,255:40,0 chr2 190315629 . C . PASS END=190315694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,1:94:99:68:0,120,1800:0,197,255:40,0 chr2 190316531 . A . PASS END=190316621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:62:0,120,1800:0,149,255:40,0 chr2 190320046 . A . PASS END=190320140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:35:0,80,1258:0,80,255:40,0 chr2 190320141 . T . PASS END=190320153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:26:0,69,1035:0,78,255:26,0 chr2 190320154 . T . PASS END=190320170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:19:0,48,720:0,57,255:19,0 chr2 190322037 . G . PASS END=190322107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:70:0,120,1800:0,190,255:40,0 chr2 190323479 . G . PASS END=190323529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,110,1488:0,110,255:40,0 chr2 190323530 . A G, 200.48 PASS DP=51;MQ=249.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,27,0:0,24,0:150:238,153,0,338,338,338:255,153,0:0,0:2.0048e+02,1.5048e+02,0.0000e+00,3.3525e+02,3.7002e+02,3.3826e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,34:0,0,27,24 chr2 190323531 . T . PASS END=190323567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:52:0,120,1800:0,133,255:40,0 chr2 190323568 . C . PASS END=190323598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1341:0,105,255:36,0 chr2 190324062 . G . PASS END=190324150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:52:0,120,1800:0,126,255:40,0 chr2 190327210 . G . PASS END=190327317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,2:53:86:33:0,86,1255:0,86,255:40,0 chr2 190327318 . T . PASS END=190327318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1423:0,66,255:40,0 chr2 190327319 . C . PASS END=190327362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:34:0,81,1215:0,92,255:40,0 chr2 190327363 . A . PASS END=190327368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:26,0 chr2 190328420 . A . PASS END=190328479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:48:0,117,1767:0,117,255:40,0 chr2 190328572 . A . PASS END=190328687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:40:0,90,1350:0,119,255:40,0 chr2 190329805 . T . PASS END=190329808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:24,0 chr2 190329809 . A . PASS END=190329979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:32:0,81,1215:0,96,255:40,0 chr2 190329980 . G . PASS END=190329980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:78:49:0,78,1170:0,147,255:26,0 chr2 190331151 . G . PASS END=190331308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:81:27:0,81,1000:0,81,255:40,0 chr2 190332194 . A . PASS END=190332374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,120,1800:0,125,255:40,0 chr2 190333201 . G . PASS END=190333295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,140,255:40,0 chr2 190334070 . T . PASS END=190334165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,134,255:40,0 chr2 190334802 . T . PASS END=190334971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:33:0,81,1116:0,81,255:40,0 chr2 190335545 . A . PASS END=190335604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:74:0,120,1800:0,212,255:40,0 chr2 190338912 . C . PASS END=190339058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:48:0,108,1620:0,111,255:40,2 chr2 190339443 . C . PASS END=190339534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:45:0,80,1378:0,80,255:40,0 chr2 190339939 . T . PASS END=190340143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:42:0,81,1215:0,119,255:40,0 chr2 190425417 . A . PASS END=190425417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 190425604 . T . PASS END=190425604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 190425958 . G . PASS END=190425958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 190426182 . C . PASS END=190426182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr2 190426295 . C . PASS END=190426295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 190426476 . T . PASS END=190426476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,212,255:40,0 chr2 190426604 . T . PASS END=190426917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:94:42:0,94,1530:0,94,255:40,0 chr2 190428310 . C . PASS END=190428326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,927:0,81,255:36,0 chr2 190428327 . A . PASS END=190428327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:35,0 chr2 190428328 . C . PASS END=190428328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1360:0,111,255:37,0 chr2 190428329 . G . PASS END=190428329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr2 190428330 . C . PASS END=190428579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:94:38:0,94,1241:0,94,255:40,0 chr2 190428580 . A . PASS END=190428580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1586:0,78,255:40,0 chr2 190428581 . T . PASS END=190428911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:86:41:0,86,1395:0,86,255:40,0 chr2 190428912 . C . PASS END=190428922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:32:0,75,1125:0,96,255:26,0 chr2 190428923 . A . PASS END=190428923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:3:27:0,3,801:0,3,255:25,0 chr2 190428924 . G . PASS END=190428941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr2 190428942 . G . PASS END=190428948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:22:0,42,630:0,50,255:19,0 chr2 190428949 . T . PASS END=190428951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 190430080 . C . PASS END=190430083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr2 190430084 . G . PASS END=190430085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 190430086 . G . PASS END=190430086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 190430087 . T . PASS END=190430094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 190430095 . G . PASS END=190430098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 190430099 . T . PASS END=190430099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 190430100 . T . PASS END=190430100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:25,0 chr2 190430101 . T . PASS END=190430103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 190430104 . A . PASS END=190430104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 190430105 . T . PASS END=190430117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 190430118 . T . PASS END=190430118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 190430119 . C . PASS END=190430306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:30:0,84,1127:0,89,255:40,0 chr2 190430307 . C . PASS END=190430307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:31,0 chr2 190430308 . G . PASS END=190430316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:33:0,84,1260:0,98,255:32,0 chr2 190430317 . C . PASS END=190430325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:33:0,63,945:0,83,255:25,0 chr2 190436441 . T . PASS END=190436567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:40:0,110,1512:0,110,255:40,0 chr2 190437572 . G . PASS END=190437687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:91:37:0,91,1252:0,91,255:40,0 chr2 190437701 . G . PASS END=190437701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 190439881 . A . PASS END=190439881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 190439887 . C . PASS END=190440033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:33:0,81,1201:0,86,255:40,0 chr2 190440034 . A . PASS END=190440038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:32:0,69,1035:0,96,255:24,0 chr2 190440039 . C . PASS END=190440039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1048:0,54,255:22,0 chr2 190440040 . G . PASS END=190440041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 190440042 . T . PASS END=190440042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,923:0,57,255:22,0 chr2 190440043 . C . PASS END=190440046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:23,0 chr2 190444539 . C . PASS END=190444592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,120,1800:0,130,255:40,0 chr2 190444593 . G . PASS END=190444606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,183,255:40,0 chr2 190445144 . C . PASS END=190445156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1466:0,117,255:39,0 chr2 190445157 . C . PASS END=190445186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1333:0,84,255:37,0 chr2 190445214 . T . PASS END=190445214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 190445217 . G . PASS END=190445217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:24,0 chr2 190445333 . T . PASS END=190445333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 190445387 . A . PASS END=190445387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 190445391 . T . PASS END=190445391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr2 190445439 . G . PASS END=190445439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 190445495 . T . PASS END=190445495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr2 190445530 . G . PASS END=190445530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 190526247 . A . PASS END=190526261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:25,0 chr2 190526262 . A . PASS END=190526264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,962:0,78,255:26,0 chr2 190526265 . C . PASS END=190526270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr2 190526271 . G . PASS END=190526271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 190526272 . A . PASS END=190526283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1017:0,87,255:29,0 chr2 190526284 . T . PASS END=190526284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 190526285 . G . PASS END=190526309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1100:0,87,255:29,0 chr2 190526310 . C . PASS END=190526333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,846:0,72,255:25,0 chr2 190526334 . A . PASS END=190526334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,781:0,25,255:20,0 chr2 190526335 . A . PASS END=190526336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 190528627 . A . PASS END=190528680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,0:111:99:92:0,120,1800:0,255,255:40,0 chr2 190530083 . C . PASS END=190530177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:56:0,120,1800:0,139,255:40,0 chr2 190530767 . A . PASS END=190530837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,1:109:99:96:0,120,1800:0,255,255:40,0 chr2 190530859 . A . PASS END=190531204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:94:36:0,94,1485:0,94,255:40,0 chr2 190531205 . A . PASS END=190531205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:76:44:0,76,1385:0,76,255:36,0 chr2 190531206 . A . PASS END=190531227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:40:0,85,1440:0,85,255:39,0 chr2 190531228 . T . PASS END=190531228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1148:0,75,255:30,0 chr2 190531229 . A . PASS END=190531238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:35:0,84,1260:0,88,255:33,0 chr2 190531239 . T . PASS END=190531239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1158:0,74,255:29,0 chr2 190531240 . A . PASS END=190531244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1125:0,80,255:30,0 chr2 190531245 . T . PASS END=190531245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,951:0,76,255:29,0 chr2 190531246 . T . PASS END=190531247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 190531248 . T . PASS END=190531248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1062:0,77,255:28,0 chr2 190531249 . T . PASS END=190531269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 190531270 . T . PASS END=190531270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 190531271 . T . PASS END=190531315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1050:0,83,255:33,0 chr2 190531316 . G . PASS END=190531316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1241:0,53,255:31,0 chr2 190531317 . T . PASS END=190531332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:32,0 chr2 190531333 . G . PASS END=190531333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:26,0 chr2 190531334 . T . PASS END=190531335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 190531336 . G . PASS END=190531343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 190531344 . A . PASS END=190531346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 190531347 . A . PASS END=190531349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 190531350 . T . PASS END=190531350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:23,0 chr2 190531351 . G . PASS END=190531381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr2 190531382 . C . PASS END=190531385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:27,0 chr2 190531386 . T . PASS END=190531387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 190531388 . G . PASS END=190531388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 190531389 . A . PASS END=190531389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 190531390 . C . PASS END=190531391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 190531392 . T . PASS END=190531402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 190531403 . A . PASS END=190531403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 190531404 . T . PASS END=190531425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1149:0,82,255:35,0 chr2 190531426 . G A, 151.87 PASS DP=36;MQ=250.00;FractionInformativeReads=0.972 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,15,0:0,20,0:102:190,105,0,1312,105,1312:255,105,0:0,0:1.5187e+02,1.0187e+02,0.0000e+00,4.5000e+02,1.3664e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,17:0,0,26,9 chr2 190531427 . G . PASS END=190531436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1258:0,105,255:35,0 chr2 190531437 . T . PASS END=190531437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,927:0,74,255:31,0 chr2 190531438 . T . PASS END=190531463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1116:0,101,255:34,0 chr2 190531464 . T . PASS END=190531611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1225:0,89,255:40,0 chr2 190531612 . G . PASS END=190531612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:30,0 chr2 190531613 . C . PASS END=190531627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1194:0,83,255:31,0 chr2 190531628 . G . PASS END=190531628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:27,0 chr2 190531629 . C . PASS END=190531635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 190531636 . A . PASS END=190531636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:26,0 chr2 190531637 . T . PASS END=190531639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 190531640 . C . PASS END=190531640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 190531641 . C . PASS END=190531647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:30,0 chr2 190531648 . C . PASS END=190531648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 190531649 . C . PASS END=190531678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1202:0,86,255:35,0 chr2 190531679 . T . PASS END=190531681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr2 190531682 . C . PASS END=190531696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 190531697 . A . PASS END=190531697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 190531698 . G . PASS END=190532264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1150:0,80,255:40,0 chr2 190532265 . A . PASS END=190532295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,102,1537:0,102,255:40,0 chr2 190532296 . G . PASS END=190532296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1254:0,68,255:38,0 chr2 190532297 . T . PASS END=190532297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,118,1453:0,118,255:40,0 chr2 190532298 . G . PASS END=190532298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:54:45:0,54,1224:0,54,255:38,0 chr2 190532299 . A . PASS END=190532301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,120,1800:0,135,255:40,0 chr2 190532302 . T . LowGQ END=190532302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,13:46:0:46:0,0,812:78,0,255:28,0 chr2 190532303 . C . PASS END=190532322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1215:0,84,255:38,0 chr2 190532490 . G . PASS END=190532494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1319:0,95,255:36,0 chr2 190532495 . T . PASS END=190532495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:34,0 chr2 190532496 . C . PASS END=190532641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:36:0,81,1215:0,103,255:40,0 chr2 190532642 . A . PASS END=190532643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 190532644 . T . PASS END=190532644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr2 190532645 . T . PASS END=190532655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:68:28:0,68,1014:0,68,255:26,0 chr2 190532656 . A . PASS END=190532661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 190532662 . A . PASS END=190532671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:26,0 chr2 190535167 . A . PASS END=190535452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:44:0,99,1511:0,99,255:40,0 chr2 190541217 . A . PASS END=190541792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:43:0,101,1712:0,101,255:40,0 chr2 190541793 . A . PASS END=190541817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:51:0,84,1260:0,102,255:40,0 chr2 190554253 . G . PASS END=190554690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:43:0,116,1596:0,116,255:40,0 chr2 190556981 . A . PASS END=190557144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:80:31:0,80,1095:0,80,255:40,0 chr2 190557800 . A . PASS END=190557903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:65:0,120,1800:0,178,255:40,0 chr2 190559707 . C . PASS END=190559708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,776:0,52,255:19,0 chr2 190559709 . A . PASS END=190559711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr2 190559712 . A . PASS END=190559887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:84:30:0,84,1186:0,90,255:40,0 chr2 190560876 . A . PASS END=190561022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:97:35:0,97,1256:0,97,255:40,0 chr2 190561023 . G . PASS END=190561059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,141,255:40,0 chr2 190561060 . A G, 50.00 PASS DP=52;MQ=250.00;MQRankSum=6.061;ReadPosRankSum=2.462;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,31,0:0.596,0.000:52:14,17,0:7,14,0:47:85,0,47,1109,739,1848:255,0,255:19,0:5.0000e+01,8.9308e-05,4.9763e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,9,22:14,7,13,18 chr2 190561061 . G . PASS END=190561095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:86:34:0,86,1255:0,86,255:40,0 chr2 190569749 . G . PASS END=190569749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 190569750 . T . PASS END=190569913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1050:0,90,255:40,0 chr2 190569914 . A . PASS END=190569917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr2 190569918 . T . PASS END=190569918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 190569919 . C . PASS END=190569923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 190569924 . T . PASS END=190569924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:44:28:0,44,747:0,44,255:25,0 chr2 190569925 . T . PASS END=190569932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,891:0,64,255:26,0 chr2 190569933 . A . PASS END=190569935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:25,0 chr2 190569936 . T . PASS END=190569936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 190569937 . G . PASS END=190569937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:22,0 chr2 190569938 . A . PASS END=190569950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:23,0 chr2 190571664 . G . PASS END=190571872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:87:30:0,87,1180:0,90,255:40,0 chr2 190575775 . A . PASS END=190575879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1310:0,81,255:40,0 chr2 190584298 . G . PASS END=190584302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:29,0 chr2 190584303 . A . PASS END=190584303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:30,0 chr2 190584304 . T . PASS END=190584311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1255:0,86,255:36,0 chr2 190584312 . T . PASS END=190584312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr2 190584313 . T . PASS END=190584510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:31:0,84,1260:0,89,255:40,0 chr2 190584511 . G . PASS END=190584511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 190584512 . T . PASS END=190584521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 190584522 . G . PASS END=190584522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 190584523 . A . PASS END=190584523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 190584524 . T . PASS END=190584525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1147:0,77,255:26,0 chr2 190584526 . T . PASS END=190584526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 190584527 . T . PASS END=190584527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:28,0 chr2 190584528 . A . PASS END=190584528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:28,0 chr2 190584529 . T . PASS END=190584533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 190584534 . A . PASS END=190584539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr2 190585345 . A . PASS END=190585513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1202:0,84,255:40,0 chr2 190592549 . G . PASS END=190592815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:35:0,81,1219:0,81,255:40,0 chr2 190592816 . T . PASS END=190592816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:27,0 chr2 190592817 . C . PASS END=190592820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,81,255:30,0 chr2 190592821 . A . PASS END=190592823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:37:0,75,1125:0,95,255:25,0 chr2 190592993 . G . PASS END=190592993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 190592994 . C . PASS END=190593010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1095:0,88,255:36,0 chr2 190593011 . A . PASS END=190593011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:34,0 chr2 190593012 . A . PASS END=190593146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:80:36:0,80,1256:0,80,255:40,0 chr2 190593386 . G . PASS END=190593394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:40,0 chr2 190593395 . C . PASS END=190593395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:69:47:0,69,1558:0,69,255:40,0 chr2 190593396 . T . PASS END=190593459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:82:47:0,82,1668:0,82,255:40,0 chr2 190593460 . G . PASS END=190593460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,7:76:75:76:0,75,2131:0,75,255:40,0 chr2 190593461 . C . PASS END=190593547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:40:0,87,1305:0,119,255:40,0 chr2 190595221 . G . PASS END=190595257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,151,255:40,0 chr2 190595258 . G T, 232.67 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,31,0:0,31,0:183:270,186,0,2301,186,2301:255,189,0:0,0:2.3267e+02,1.8267e+02,0.0000e+00,4.5000e+02,2.1744e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,32:0,0,27,35 chr2 190595259 . G . PASS END=190595295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:63:0,120,1800:0,171,255:40,0 chr2 190595296 . T . PASS END=190595327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:50:0,108,1620:0,149,255:40,0 chr2 190595665 . A . PASS END=190595680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,199,255:40,0 chr2 190595681 . C T, 47.66 PASS DP=76;MQ=250.00;MQRankSum=7.401;ReadPosRankSum=6.980;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:44,32,0:0.421,0.000:76:15,14,0:29,18,0:47:82,0,50,1079,1566,2645:255,0,255:40,0:4.7657e+01,9.6297e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:22,22,13,19:21,23,17,15 chr2 190595682 . T . PASS END=190595694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,212,255:40,0 chr2 190597833 . G . PASS END=190597955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:97:38:0,97,1289:0,97,255:40,0 chr2 190602409 . G . PASS END=190602475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:68:0,120,1800:0,164,255:40,0 chr2 190602476 . T . PASS END=190602512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:73:0,120,1800:0,178,255:40,0 chr2 190602513 . T C, 263.23 PASS DP=72;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,37,0:0,35,0:213:301,216,0,2738,216,2738:255,216,0:0,0:2.6323e+02,2.1323e+02,0.0000e+00,4.5000e+02,2.4800e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,38:0,0,39,33 chr2 190602514 . G . PASS END=190602550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:63:0,120,1800:0,170,255:40,0 chr2 190602551 . C . PASS END=190602567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:50:0,102,1530:0,136,255:40,0 chr2 190603291 . A . PASS END=190603408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:93:36:0,93,1177:0,94,255:40,0 chr2 190606068 . G . PASS END=190606163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:34:0,90,1350:0,102,255:40,0 chr2 190606164 . C . PASS END=190606177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:26:0,63,945:0,78,255:26,0 chr2 190608001 . G . PASS END=190608200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:43:0,119,1689:0,119,255:40,0 chr2 190609468 . T . PASS END=190609514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:87:0,120,1800:0,238,255:40,0 chr2 190611106 . G . PASS END=190611121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:42:0,96,1437:0,96,255:40,0 chr2 190611122 . A . PASS END=190611344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:34:0,81,1215:0,86,255:40,0 chr2 190611345 . G . PASS END=190611353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:28:0,63,945:0,80,255:21,0 chr2 190611858 . T . PASS END=190611867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 190611868 . C . PASS END=190611868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 190611869 . C . PASS END=190611872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 190611873 . G . PASS END=190611873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 190611874 . C . PASS END=190611878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 190611879 . T . PASS END=190611879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 190611880 . G . PASS END=190611889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 190611890 . T . PASS END=190611894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr2 190611988 . T . PASS END=190611988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:13,0 chr2 190611989 . C . PASS END=190611999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 190612000 . G . PASS END=190612005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 190612006 . A . PASS END=190612006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:11,0 chr2 190612007 . G . PASS END=190612025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 190612026 . C . PASS END=190612036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr2 190612037 . C . PASS END=190612037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:7,0 chr2 190612038 . T . PASS END=190612041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr2 190612042 . G . PASS END=190612045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:9:0,15,225:0,27,255:6,0 chr2 190612046 . G . LowGQ END=190612057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:0:7:0,0,45:0,0,200:3,0 chr2 190615304 . T . PASS END=190615382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:74:0,120,1800:0,198,255:40,1 chr2 190617303 . T . PASS END=190617450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:59:0,120,1800:0,150,255:40,0 chr2 190617575 . C . PASS END=190617605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,120,1800:0,125,255:40,0 chr2 190617606 . G . PASS END=190617642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,155,255:40,0 chr2 190617643 . A G, 212.06 PASS DP=56;MQ=250.00;FractionInformativeReads=0.982 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,30,0:0,25,0:162:250,165,0,2093,165,2093:255,171,0:0,0:2.1206e+02,1.6206e+02,0.0000e+00,4.5000e+02,1.9683e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,28:0,0,24,31 chr2 190617644 . T . PASS END=190617699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,105,1575:0,117,255:40,0 chr2 190617700 . T C, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=0.108;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:12,7,0:7,14,0:48:85,0,50,720,679,1399:255,0,255:16,0:5.0000e+01,6.6010e-05,5.2829e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,9,12:12,7,11,10 chr2 190617701 . G . PASS END=190617705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1329:0,97,255:34,0 chr2 190618642 . C . PASS END=190618790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:46:0,117,1755:0,132,255:40,0 chr2 190618867 . C . PASS END=190619046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:87:36:0,87,1305:0,98,255:40,2 chr2 190619047 . T . PASS END=190619055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,80,255:26,0 chr2 190619056 . A . PASS END=190619056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 190619057 . A . PASS END=190619057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 190619058 . A . PASS END=190619059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 190619060 . T . PASS END=190619071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,84,255:26,0 chr2 190619899 . C . PASS END=190619905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:31,0 chr2 190619906 . A . PASS END=190619906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 190619907 . G . PASS END=190620231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:31:0,81,1157:0,81,255:40,0 chr2 190620232 . T . PASS END=190620232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1022:0,60,255:29,0 chr2 190620233 . T . PASS END=190620237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:30,0 chr2 190620238 . A . PASS END=190620238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:30,1 chr2 190620239 . T . PASS END=190620239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr2 190620240 . T . PASS END=190620242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:30,0 chr2 190620243 . C . PASS END=190620263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:24:0,60,900:0,72,255:26,0 chr2 190620264 . C . PASS END=190620274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:20:0,42,630:0,60,255:19,0 chr2 190620275 . A . PASS END=190620283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr2 190620284 . G . PASS END=190620284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 190620285 . T . PASS END=190620286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 190625824 . T . PASS END=190625852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:94:0,120,1800:0,233,255:40,0 chr2 190626146 . T . PASS END=190626371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:96:43:0,96,1440:0,96,255:40,0 chr2 190626372 . C . PASS END=190626381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:63:38:0,63,945:0,97,255:26,0 chr2 190627487 . G . PASS END=190627487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 190627488 . A . PASS END=190627488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 190627489 . G . PASS END=190627540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,940:0,81,255:33,0 chr2 190627541 . C . PASS END=190627541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:27,0 chr2 190627542 . C . PASS END=190627555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 190627556 . T . PASS END=190627556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 190627557 . G . PASS END=190627563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 190627564 . C . PASS END=190627564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 190627565 . G . PASS END=190627568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 190627569 . G . PASS END=190627569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 190627891 . C . PASS END=190627903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 190632085 . C . PASS END=190632114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,183,255:40,0 chr2 190636493 . T . PASS END=190636628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,111,1621:0,111,255:40,0 chr2 190638831 . T . PASS END=190638840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:84:0,120,1800:0,219,255:40,0 chr2 190640287 . T . PASS END=190640423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:92:35:0,92,1324:0,92,255:40,0 chr2 190640424 . G . PASS END=190640424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:33,0 chr2 190640425 . C . PASS END=190640437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1210:0,86,255:33,0 chr2 190640438 . A . PASS END=190640439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 190640440 . C . PASS END=190640442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 190647148 . C . PASS END=190647321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,99,1368:0,103,255:40,0 chr2 190656536 . A . PASS END=190656650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:33:0,81,1215:0,81,255:40,0 chr2 190656651 . G . PASS END=190656656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,93,255:26,0 chr2 190656657 . A . PASS END=190656657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,986:0,57,255:22,0 chr2 190656658 . T . PASS END=190656664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:22,0 chr2 190656665 . C . PASS END=190656666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:25:0,57,855:0,75,255:19,0 chr2 190656667 . G . PASS END=190656667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 190660495 . G . PASS END=190660501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,117,1460:0,117,255:40,0 chr2 190660502 . A . PASS END=190660502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:39,0 chr2 190660503 . T . PASS END=190660677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:41:0,111,1567:0,113,255:40,0 chr2 190670378 . G . PASS END=190670379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 190670380 . T . PASS END=190670380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 190670381 . T . PASS END=190670496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:31:0,83,1174:0,83,255:40,0 chr2 190670497 . G . PASS END=190670538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:74:0,120,1800:0,178,255:40,1 chr2 190670539 . T . LowGQ END=190670541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,15:89:0:87:0,0,2251:31,0,255:40,17 chr2 190670542 . A . PASS END=190670582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:83:0,120,1800:0,217,255:40,0 chr2 190670583 . G . PASS END=190670608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:57:0,120,1800:0,166,255:40,0 chr2 190682743 . G . PASS END=190682907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:36:0,93,1395:0,98,255:40,0 chr2 190687400 . A . PASS END=190687426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:84:0,120,1800:0,236,255:40,0 chr2 190708690 . G . PASS END=190708803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:34:0,81,1215:0,92,255:40,0 chr2 190708804 . C . PASS END=190708806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr2 190717381 . A . PASS END=190717503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:52:0,106,1549:0,106,255:40,0 chr2 190718665 . T . PASS END=190718808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:40:0,81,1405:0,81,255:40,0 chr2 190718965 . G . PASS END=190719854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:83:33:0,83,1186:0,83,255:40,1 chr2 190722211 . A . PASS END=190722230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1124:0,80,255:32,0 chr2 190728469 . A . PASS END=190728954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:86:39:0,86,1349:0,86,255:40,0 chr2 190729080 . T . PASS END=190729085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,188,255:40,0 chr2 190732525 . T . PASS END=190732655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:40:0,102,1444:0,120,255:40,0 chr2 190738222 . G . PASS END=190738382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:50:0,120,1800:0,135,255:40,0 chr2 190741998 . G . PASS END=190742162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:55:0,120,1800:0,162,255:40,0 chr2 190920668 . G . PASS END=190920668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 190920711 . G . PASS END=190920711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:77:0,120,1800:0,215,255:40,0 chr2 190920911 . C . PASS END=190920911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,219,255:40,0 chr2 190920921 . T . PASS END=190920921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,220,255:40,0 chr2 190921061 . A . PASS END=190921061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:99:48:0,111,1591:0,111,255:40,0 chr2 190921200 . C . PASS END=190921200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 190921287 . A . PASS END=190921287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 190921289 . T . PASS END=190921289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 190921648 . G . PASS END=190921648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 190921725 . T . PASS END=190921725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:31,0 chr2 190921857 . A . PASS END=190921857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 190921863 . T . PASS END=190921863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,108,1620:0,123,255:36,0 chr2 190921984 . T . PASS END=190922322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:95:37:0,95,1319:0,95,255:40,0 chr2 190922323 . T . PASS END=190922323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1211:0,78,255:29,0 chr2 190922324 . C . PASS END=190922339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,102,255:32,0 chr2 190922340 . T . PASS END=190922364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:25:0,71,864:0,71,255:26,0 chr2 190924788 . C . PASS END=190925161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:37:0,98,1372:0,98,255:40,0 chr2 190926945 . C . PASS END=190926945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 190926950 . A . PASS END=190927322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:28:0,81,1139:0,84,255:40,0 chr2 190927421 . C . PASS END=190927421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 191064587 . A . PASS END=191064587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 191064588 . T . PASS END=191064599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 191064600 . A . PASS END=191064602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1154:0,61,255:30,0 chr2 191064603 . C . PASS END=191064603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 191064604 . A . PASS END=191064604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr2 191064605 . A . PASS END=191064605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 191064606 . A . PASS END=191064606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:31,0 chr2 191064607 . G . PASS END=191064607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:31,0 chr2 191064608 . C . PASS END=191064614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1059:0,63,255:32,0 chr2 191064615 . T . PASS END=191064615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 191064616 . C . PASS END=191064616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:33,0 chr2 191064617 . C . PASS END=191064715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:34:0,83,1247:0,83,255:40,0 chr2 191064716 . G . PASS END=191064752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,120,1800:0,139,255:40,0 chr2 191064753 . C T, 49.59 PASS DP=58;MQ=250.00;MQRankSum=6.516;ReadPosRankSum=1.138;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,27,0:0.466,0.000:58:18,19,0:13,8,0:48:84,0,50,951,1108,2060:255,0,255:27,0:4.9586e+01,6.9634e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,21,14,13:17,14,16,11 chr2 191064754 . T . PASS END=191064790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,109,1604:0,109,255:40,0 chr2 191064791 . A . PASS END=191064860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1186:0,83,255:40,0 chr2 191064861 . G . PASS END=191064864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 191064865 . G . PASS END=191064866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:40:30:0,40,848:0,40,255:25,0 chr2 191064867 . G . PASS END=191064874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:23,0 chr2 191069843 . T . PASS END=191069958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:62:0,120,1800:0,173,255:40,0 chr2 191073548 . C . PASS END=191073639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,132,255:40,0 chr2 191077682 . C . PASS END=191077684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1135:0,93,255:34,0 chr2 191077685 . A . PASS END=191077685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1139:0,69,255:31,0 chr2 191077686 . C . PASS END=191077698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:35:0,102,1530:0,105,255:40,0 chr2 191077699 . G . PASS END=191077801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,120,1800:0,131,255:40,0 chr2 191109613 . C . PASS END=191109694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:59:0,120,1800:0,163,255:40,0 chr2 191110879 . C . PASS END=191110941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:68:0,120,1800:0,204,255:40,2 chr2 191114366 . C . PASS END=191114452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:70:0,120,1800:0,184,255:40,0 chr2 191115101 . C . PASS END=191115103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 191116261 . C . PASS END=191116284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,120,1800:0,122,255:40,0 chr2 191116888 . C . PASS END=191116904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,939:0,75,255:25,0 chr2 191116905 . A . PASS END=191116905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,791:0,58,255:24,0 chr2 191116906 . G . PASS END=191116906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1040:0,87,255:29,0 chr2 191116907 . T . PASS END=191116907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,962:0,70,255:28,0 chr2 191116908 . G . PASS END=191117002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:33:0,91,1233:0,91,255:40,1 chr2 191117003 . A . PASS END=191117003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1169:0,76,255:35,0 chr2 191117004 . A . PASS END=191117016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:40:0,89,1261:0,89,255:40,0 chr2 191117017 . C . PASS END=191117020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:78:38:0,78,1170:0,97,255:26,0 chr2 191117021 . T . PASS END=191117023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:37:0,81,1215:0,100,255:27,0 chr2 191117024 . G . PASS END=191117024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr2 191117025 . G . PASS END=191117027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:40:0,84,1260:0,120,255:29,0 chr2 191117028 . A . PASS END=191117028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1205:0,74,255:29,0 chr2 191117029 . C . PASS END=191117030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr2 191117031 . G . PASS END=191117033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,79,255:25,0 chr2 191125881 . C . PASS END=191125951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:93:43:0,93,1427:0,93,255:40,0 chr2 191125952 . A . PASS END=191125952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1216:0,62,255:32,0 chr2 191125953 . C . PASS END=191125960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:38:0,89,1222:0,89,255:35,0 chr2 191152312 . C . PASS END=191152364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:91:0,120,1800:0,214,255:40,0 chr2 191155131 . C . PASS END=191155190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,123,255:40,0 chr2 191155191 . C . PASS END=191155211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:71:0,120,1800:0,141,255:40,0 chr2 191159272 . C . PASS END=191159282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:41:0,96,1604:0,96,255:40,2 chr2 191159283 . C . PASS END=191159283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:52:46:0,52,1551:0,52,255:40,2 chr2 191159284 . C . PASS END=191159356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:42:0,96,1384:0,96,255:40,0 chr2 191159365 . A . PASS END=191159365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,122,255:33,0 chr2 191161539 . C . PASS END=191161584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,132,255:40,0 chr2 191161585 . T . PASS END=191161621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:72:0,120,1800:0,181,255:40,1 chr2 191161622 . T C, 50.00 PASS DP=78;MQ=248.89;MQRankSum=6.853;ReadPosRankSum=4.503;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:38,40,0:0.513,0.000:78:20,18,0:18,22,0:48:85,0,50,1400,1294,2694:255,0,255:35,0:5.0000e+01,6.5492e-05,5.2934e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,23,21,19:17,21,17,23 chr2 191161623 . G . PASS END=191161659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:67:0,120,1800:0,134,255:40,2 chr2 191161660 . T . PASS END=191161679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,117,1755:0,139,255:40,0 chr2 191161682 . G . PASS END=191161682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,108,1620:0,147,255:36,0 chr2 191175480 . C . PASS END=191175522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:69:0,120,1800:0,149,255:40,0 chr2 191184442 . C . PASS END=191184454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,612:0,48,255:17,0 chr2 191184455 . T . PASS END=191184459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:13,0 chr2 191184460 . A . PASS END=191184460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:12,0 chr2 191184461 . T . PASS END=191184474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr2 191184475 . A G, 49.89 PASS DP=14;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=1.200;FractionInformativeReads=0.929;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,6,0:0.462,0.000:13:2,3,0:5,3,0:48:85,0,50,215,222,436:186,0,210:7,0:4.9895e+01,6.6269e-05,5.3000e+01,2.1453e+02,2.5635e+02,4.3899e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,2,4:5,2,1,5 chr2 191184476 . T . PASS END=191184476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 191208718 . C . PASS END=191208718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 191208719 . A . PASS END=191208719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 191208720 . C . PASS END=191208721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 191208722 . G . PASS END=191208722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 191208723 . G . PASS END=191208724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 191208725 . T . LowGQ END=191208725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,177:9,0,187:6,0 chr2 191208726 . C . PASS END=191208737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,274:0,24,255:9,0 chr2 191208738 . G . PASS END=191208738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 191208739 . C . PASS END=191208749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,260:0,30,255:10,0 chr2 191208750 . T . PASS END=191208750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr2 191208751 . G . PASS END=191208754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,321:0,33,255:11,0 chr2 191208755 . C . PASS END=191208755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:9,0 chr2 191208756 . T . PASS END=191208757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 191208758 . G . PASS END=191208761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 191208762 . C . PASS END=191208762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 191208763 . C . PASS END=191208763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 191208764 . G . PASS END=191208764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 191208765 . G . PASS END=191208794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,329:0,33,255:11,0 chr2 191208795 . C T, 49.80 PASS DP=11;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=1.532;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,5,0:0.455,0.000:11:3,2,0:3,3,0:48:85,0,50,179,214,393:153,0,192:6,0:4.9803e+01,6.7304e-05,5.3000e+01,1.7883e+02,2.4925e+02,3.9632e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,1,4:1,5,4,1 chr2 191208796 . C . PASS END=191208813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,435:0,33,255:12,0 chr2 191208814 . T . PASS END=191208814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 191208815 . G . PASS END=191208815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,356:0,19,255:11,0 chr2 191208816 . G . PASS END=191208818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 191208819 . C . PASS END=191208819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 191208820 . C . PASS END=191208828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,382:0,36,255:12,0 chr2 191208829 . T . PASS END=191208829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 191208830 . C . PASS END=191208831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 191208832 . T . PASS END=191208832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 191208833 . C . PASS END=191208860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 191208861 . C . PASS END=191208864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 191208865 . C . PASS END=191208870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 191208871 . A . PASS END=191208871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 191208872 . G . PASS END=191208874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 191208875 . A . PASS END=191208903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:5:0,12,180:0,15,149:6,0 chr2 191208904 . A . LowGQ END=191208905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 191208906 . G . PASS END=191208912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,149:4,0 chr2 191208913 . A . PASS END=191208914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:9:5:0,9,135:0,15,164:3,0 chr2 191224829 . A . PASS END=191224856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,869:0,66,255:25,0 chr2 191224857 . G . PASS END=191224943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:29:0,84,1035:0,85,255:40,0 chr2 191224944 . G . PASS END=191224945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,120,1800:0,126,255:40,0 chr2 191224946 . G . PASS END=191224946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1201:0,62,255:39,0 chr2 191224947 . A . PASS END=191224960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:93:42:0,93,1468:0,93,255:40,0 chr2 191224961 . T . PASS END=191224961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:67:45:0,67,1121:0,67,255:38,0 chr2 191224962 . T . PASS END=191224980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,102,1566:0,102,255:40,0 chr2 191224981 . G T, 43.31 PASS DP=44;MQ=250.00;MQRankSum=5.453;ReadPosRankSum=-0.159;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,16,0:0.364,0.000:44:12,10,0:16,6,0:43:78,0,50,519,1001,1521:255,0,255:28,0:4.3311e+01,2.2444e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,15,6,10:17,11,8,8 chr2 191224982 . C . PASS END=191225001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:36:0,93,1395:0,97,255:40,0 chr2 191225002 . G . PASS END=191225002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:31,0 chr2 191225003 . G . PASS END=191225003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1217:0,53,255:31,0 chr2 191225004 . A . PASS END=191225007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:33:0,93,1395:0,99,255:32,0 chr2 191225008 . T . PASS END=191225008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:30,0 chr2 191225009 . A . PASS END=191225015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1155:0,80,255:31,0 chr2 191225016 . A . PASS END=191225016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 191225017 . G . PASS END=191225018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 191225019 . A . PASS END=191225026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 191225027 . A . PASS END=191225032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 191227353 . T . PASS END=191227413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:89:0,120,1800:0,241,255:40,0 chr2 191231421 . G . PASS END=191231421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 191231422 . G . PASS END=191231457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,763:0,69,255:24,0 chr2 191231458 . G A, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,10,0:0,15,0:72:160,75,0,957,75,957:255,75,0:0,0:1.2224e+02,7.2239e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,10:0,0,12,13 chr2 191231459 . G . PASS END=191231462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,946:0,75,255:26,0 chr2 191231463 . C . PASS END=191231471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 191231472 . T . PASS END=191231472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 191231473 . T . PASS END=191231493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1111:0,82,255:31,0 chr2 191231494 . T . PASS END=191231494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1008:0,38,255:28,0 chr2 191231495 . A . PASS END=191231502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 191231503 . G A, 45.61 PASS DP=32;MQ=250.00;MQRankSum=4.652;ReadPosRankSum=0.915;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,12,0:0.375,0.000:32:11,7,0:9,5,0:45:80,0,50,429,715,1145:255,0,255:19,0:4.5607e+01,1.4108e-04,5.3000e+01,4.2919e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,12,5,7:9,11,4,8 chr2 191231504 . G . PASS END=191231540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1180:0,83,255:36,0 chr2 191231541 . T . PASS END=191231585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:85:29:0,85,1033:0,85,255:34,0 chr2 191231586 . C . PASS END=191231586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 191231587 . A . PASS END=191231595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 191231596 . T . PASS END=191231596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:27,0 chr2 191231597 . T . PASS END=191231601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 191231602 . A . PASS END=191231613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:26,0 chr2 191231614 . C . PASS END=191231621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,84,255:19,0 chr2 191233829 . A . PASS END=191233954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:36:0,80,1215:0,80,255:40,1 chr2 191233955 . T . PASS END=191233957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:32:0,78,1170:0,96,255:26,0 chr2 191233958 . G . PASS END=191233958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 191233959 . A . PASS END=191233959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 191233960 . G . PASS END=191233967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 191233968 . T . PASS END=191233976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr2 191233977 . T . PASS END=191233977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr2 191233978 . G . PASS END=191233988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,65,255:25,0 chr2 191233989 . T . PASS END=191233989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:19,0 chr2 191233990 . C . PASS END=191233994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 191233995 . C . PASS END=191233995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:18,0 chr2 191233996 . A . PASS END=191234002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 191234003 . G . PASS END=191234003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 191235570 . G . PASS END=191235571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 191235572 . G . PASS END=191235572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 191235573 . G . PASS END=191235573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 191235574 . A . PASS END=191235584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:41:14:0,41,519:0,41,255:19,0 chr2 191235585 . C . PASS END=191235591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,656:0,60,255:23,0 chr2 191235592 . G . PASS END=191235592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:22,0 chr2 191235593 . G . PASS END=191235594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 191235595 . C . PASS END=191235595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 191235596 . T . PASS END=191235596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 191235597 . T . PASS END=191235639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1009:0,80,255:34,0 chr2 191235640 . T . PASS END=191235640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1178:0,72,255:32,0 chr2 191235641 . C . PASS END=191235863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:34:0,81,1140:0,81,255:40,0 chr2 191235864 . A . PASS END=191235900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,117,1755:0,128,255:40,0 chr2 191235901 . A C, 184.53 PASS DP=47;MQ=250.00;FractionInformativeReads=0.979 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,46,0:1.000,0.000:46:0,21,0:0,25,0:135:222,138,0,1716,138,1716:255,141,0:0,0:1.8453e+02,1.3453e+02,0.0000e+00,4.5000e+02,1.6930e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,23:0,0,26,20 chr2 191235902 . G . PASS END=191235938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,114,1710:0,134,255:40,0 chr2 191235939 . C . PASS END=191236107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:34:0,90,1266:0,91,255:40,0 chr2 191236108 . C . PASS END=191236108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:28,0 chr2 191236109 . C . PASS END=191236115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:31,0 chr2 191236116 . G . PASS END=191236128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:28:0,69,1035:0,83,255:26,0 chr2 191300756 . A . PASS END=191301330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:84:38:0,84,1391:0,84,255:40,0 chr2 191301331 . A . PASS END=191301367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:50:0,118,1800:0,118,255:40,1 chr2 191301368 . A G, 50.00 PASS DP=51;MQ=250.00;MQRankSum=6.034;ReadPosRankSum=2.239;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,27,0:0.540,0.000:50:10,14,0:13,13,0:48:85,0,49,896,786,1682:255,0,255:21,0:5.0000e+01,6.7822e-05,5.2495e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,11,16:14,9,18,9 chr2 191301369 . G . PASS END=191301405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,140,255:40,0 chr2 191301406 . T . PASS END=191301588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:36:0,93,1395:0,98,255:40,0 chr2 191301589 . T . PASS END=191301589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:32,0 chr2 191301590 . T . PASS END=191301590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1250:0,91,255:32,0 chr2 191301591 . A . PASS END=191301591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:33,0 chr2 191301592 . T . PASS END=191301625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1186:0,83,255:37,0 chr2 191301626 . A . PASS END=191301626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1286:0,67,255:33,0 chr2 191301627 . T . PASS END=191301669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1267:0,95,255:39,0 chr2 191301670 . T . PASS END=191301670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:35,0 chr2 191301671 . G . PASS END=191301685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1260:0,98,255:38,0 chr2 191301686 . A . PASS END=191301686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:26,0 chr2 191301687 . C . PASS END=191301702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1178:0,85,255:31,0 chr2 191301703 . T . PASS END=191301703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1119:0,63,255:29,0 chr2 191301704 . C . PASS END=191301706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 191301707 . G . PASS END=191301707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,980:0,73,255:27,0 chr2 191301708 . G . PASS END=191301712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr2 191301713 . C . PASS END=191301713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr2 191301714 . A . PASS END=191301714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 191301715 . C . PASS END=191301727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1058:0,80,255:30,0 chr2 191301728 . G . PASS END=191301728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1066:0,60,255:28,0 chr2 191301729 . G . PASS END=191301737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1162:0,83,255:32,0 chr2 191301738 . G . PASS END=191301738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1135:0,60,255:32,0 chr2 191301739 . C . PASS END=191301751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1103:0,82,255:33,0 chr2 191301752 . C . PASS END=191301752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1278:0,78,255:26,0 chr2 191301753 . T . PASS END=191301760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1164:0,83,255:28,0 chr2 191301761 . G . PASS END=191301761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 191301762 . G . PASS END=191301775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 191301776 . T . PASS END=191301776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:29,0 chr2 191301777 . C . PASS END=191301783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 191301784 . C . PASS END=191301784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 191301785 . A . PASS END=191301785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 191301786 . T . PASS END=191301817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:24:0,62,868:0,62,255:26,0 chr2 191301818 . A . PASS END=191301818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr2 191301819 . T . PASS END=191301820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr2 191301821 . G . PASS END=191301821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:23,0 chr2 191301822 . A . PASS END=191301831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr2 191301832 . G . PASS END=191301958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,990:0,82,255:37,0 chr2 191301959 . A . PASS END=191301959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr2 191301960 . A . PASS END=191302287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:36:0,84,1214:0,84,255:40,0 chr2 191320294 . T . PASS END=191320297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr2 191334106 . C . PASS END=191334115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:52:0,120,1800:0,121,255:40,0 chr2 191334484 . G . PASS END=191334484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:35,0 chr2 191334485 . G . PASS END=191334510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:42:0,88,1512:0,88,255:40,0 chr2 191334511 . T . PASS END=191334581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:40:0,103,1338:0,103,255:40,0 chr2 191353383 . G . PASS END=191353407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,752:0,63,255:26,0 chr2 191353408 . A . PASS END=191353408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,876:0,48,255:24,0 chr2 191353409 . G . PASS END=191353432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 191353433 . G . PASS END=191353434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 191353435 . C . PASS END=191353436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 191353437 . T . PASS END=191353437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 191353438 . T . PASS END=191353438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:26,2 chr2 191353439 . C . PASS END=191353439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:21:30:0,21,971:0,21,255:26,2 chr2 191353440 . C . PASS END=191353440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,0 chr2 191353441 . C . PASS END=191353449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 191353450 . G . PASS END=191353450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 191353451 . A . PASS END=191353452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 191353453 . G . PASS END=191353453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 191353454 . A . PASS END=191353454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:28,0 chr2 191353455 . C . PASS END=191353462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 191353463 . C . PASS END=191353463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 191353464 . A . PASS END=191353464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 191353465 . G . PASS END=191353465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 191353466 . G . PASS END=191353477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr2 191353478 . G . PASS END=191353478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr2 191353479 . G . PASS END=191353480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr2 191353481 . C . PASS END=191353481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:31,0 chr2 191353482 . T . PASS END=191353489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1350:0,99,255:33,0 chr2 191353490 . G . PASS END=191353490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:29,0 chr2 191353491 . G . PASS END=191353502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1196:0,85,255:31,0 chr2 191353503 . G . PASS END=191353507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1062:0,77,255:26,0 chr2 191353508 . G . PASS END=191353510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 191353511 . G . PASS END=191353511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 191353512 . C . PASS END=191353513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 191353514 . A . PASS END=191353516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 191353517 . A . PASS END=191353519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 191353520 . G . PASS END=191353538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:22:0,62,697:0,62,255:26,0 chr2 191353539 . A . PASS END=191353544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 191354494 . G . PASS END=191354502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr2 191354503 . C . PASS END=191354503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 191354504 . A . PASS END=191354569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,1037:0,80,255:39,0 chr2 191354570 . G . PASS END=191354570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1282:0,77,255:33,0 chr2 191354571 . G . PASS END=191354574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:34,0 chr2 191354575 . T . PASS END=191354575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1173:0,74,255:33,0 chr2 191354576 . G . PASS END=191354592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1227:0,88,255:34,0 chr2 191355545 . T . PASS END=191355563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:43:0,113,1604:0,113,255:40,0 chr2 191362165 . A . PASS END=191362171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 191362172 . A . PASS END=191362172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 191362173 . A . PASS END=191362430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:32:0,83,1091:0,83,255:40,0 chr2 191362431 . A . PASS END=191362436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 191362437 . C . PASS END=191362438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 191362439 . T . PASS END=191362445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:26,0 chr2 191364558 . T . PASS END=191364582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,105,1504:0,110,255:40,0 chr2 191364741 . G . PASS END=191364746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:25,0 chr2 191364747 . A . PASS END=191364748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 191364749 . T . PASS END=191364749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1078:0,65,255:28,0 chr2 191364750 . G . PASS END=191364750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:29,0 chr2 191364751 . A . PASS END=191364751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 191364752 . G . PASS END=191364752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 191364753 . A . PASS END=191364753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,952:0,76,255:30,0 chr2 191364754 . A . PASS END=191364755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 191364756 . A . PASS END=191364756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 191364757 . G . PASS END=191364762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1202:0,93,255:32,0 chr2 191364763 . A . PASS END=191364763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:30,0 chr2 191364764 . T . PASS END=191364764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 191364765 . T . PASS END=191364765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:30,0 chr2 191364766 . C . PASS END=191364768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:32,0 chr2 191364769 . C . PASS END=191364769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1072:0,66,255:30,0 chr2 191364770 . T . PASS END=191364770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 191364771 . G . PASS END=191364771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:31,0 chr2 191364772 . C . PASS END=191364923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:31:0,85,1196:0,85,255:40,0 chr2 191364924 . C . PASS END=191364924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 191364925 . T . PASS END=191364927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 191364928 . C . PASS END=191364928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 191364929 . C . PASS END=191364929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 191364930 . G . PASS END=191364944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:28:0,63,945:0,74,255:26,0 chr2 191373915 . T . PASS END=191374005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1216:0,83,255:40,0 chr2 191374006 . A . PASS END=191374008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:30,0 chr2 191374009 . T . PASS END=191374009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 191374010 . G . PASS END=191374012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 191374013 . T . PASS END=191374013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 191374014 . T . PASS END=191374017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 191374018 . C . PASS END=191374019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 191374020 . A . PASS END=191374020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:24,0 chr2 191374021 . A . PASS END=191374024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 191374025 . C . PASS END=191374025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:23,0 chr2 191374026 . A . PASS END=191374037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 191374038 . T . PASS END=191374038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 191375087 . T . PASS END=191375226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:28:0,80,1063:0,80,255:40,0 chr2 191375227 . C . PASS END=191375227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 191375228 . A . PASS END=191375250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,89,255:35,0 chr2 191375251 . C . PASS END=191375263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,992:0,65,255:25,0 chr2 191379179 . C . PASS END=191379179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 191379180 . A . PASS END=191379182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr2 191379183 . T . PASS END=191379183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 191379184 . C . PASS END=191379184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 191379185 . A . PASS END=191379186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 191379187 . A . PASS END=191379190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 191379191 . C . PASS END=191379191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 191379192 . T . PASS END=191379199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,43,255:19,0 chr2 191379200 . C . PASS END=191379202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,747:0,60,255:21,0 chr2 191379203 . A . PASS END=191379203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 191379204 . G . PASS END=191379208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:22,0 chr2 191379209 . T . PASS END=191379209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:21,0 chr2 191379210 . A . PASS END=191379223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,870:0,69,255:26,0 chr2 191379224 . G . PASS END=191379227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 191379228 . A . PASS END=191379228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 191379229 . C . PASS END=191379229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 191379230 . A . PASS END=191379230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 191379231 . T . PASS END=191379232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 191379233 . A . PASS END=191379276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,773:0,68,255:26,0 chr2 191379277 . A . PASS END=191379404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:29:0,81,1215:0,87,255:40,0 chr2 191380996 . C . PASS END=191381110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:93:52:0,93,1395:0,130,255:40,0 chr2 191382246 . C . PASS END=191382339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:43:0,114,1710:0,114,255:40,0 chr2 191383462 . T . PASS END=191383534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:60:0,120,1800:0,174,255:40,0 chr2 191383678 . T . PASS END=191383886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:94:47:0,94,1612:0,94,255:40,0 chr2 191383887 . A . PASS END=191383909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,108,1659:0,108,255:40,0 chr2 191389989 . C . PASS END=191390088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,143,255:40,0 chr2 191390089 . G . PASS END=191390104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,101,1665:0,101,255:40,0 chr2 191399285 . C . PASS END=191399323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:5,0 chr2 191399324 . G . PASS END=191399340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:7,0 chr2 191399341 . A . PASS END=191399377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr2 191399378 . C G, 48.90 PASS DP=8;MQ=250.00;MQRankSum=1.920;ReadPosRankSum=1.920;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,3,0:0.375,0.000:8:2,1,0:3,2,0:47:84,0,50,107,171,278:92,0,162:5,0:4.8903e+01,7.7659e-05,5.3000e+01,1.0724e+02,2.0553e+02,2.8101e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,2,1:3,2,2,1 chr2 191399379 . C . PASS END=191399381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 191471682 . C . PASS END=191471694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 191471695 . T . PASS END=191471797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,994:0,81,255:40,0 chr2 191471798 . G . PASS END=191471808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,64,255:26,0 chr2 191523903 . A . PASS END=191523910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,543:0,45,255:18,0 chr2 191523911 . G . PASS END=191523916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 191523917 . A . PASS END=191523917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 191523918 . C . PASS END=191523918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 191523919 . C . PASS END=191523920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 191523921 . A . PASS END=191523921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 191523922 . G . PASS END=191523926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr2 191523927 . C . PASS END=191523927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 191523928 . T . PASS END=191523932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 191523933 . G . PASS END=191523933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 191523934 . A . PASS END=191523934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 191523935 . G . PASS END=191523935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 191523936 . T . PASS END=191523938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 191523939 . C . PASS END=191523939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 191523940 . A . PASS END=191523942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1039:0,81,255:29,0 chr2 191523943 . T . PASS END=191523943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 191523944 . G . PASS END=191523945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 191523946 . A . PASS END=191523946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 191523947 . T . PASS END=191523947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 191523948 . A . PASS END=191523948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 191523949 . G . PASS END=191523956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1172:0,83,255:30,0 chr2 191523957 . C . PASS END=191523957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 191523958 . A . PASS END=191523968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1089:0,93,255:31,0 chr2 191523969 . C . PASS END=191523969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 191523970 . T . PASS END=191523970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1016:0,46,255:28,0 chr2 191523971 . A . PASS END=191523973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,986:0,60,255:29,0 chr2 191523974 . T . PASS END=191523975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 191523976 . C . PASS END=191523976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:29,0 chr2 191523977 . T . PASS END=191523980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 191523981 . T . PASS END=191523982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 191523983 . T . PASS END=191524120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:30:0,86,1103:0,86,255:38,0 chr2 191524121 . A . PASS END=191524121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:32:32:0,32,1008:0,32,255:28,0 chr2 191524122 . G . PASS END=191524122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 191524123 . A . PASS END=191524123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:30,0 chr2 191524124 . C . PASS END=191524126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:31,0 chr2 191524127 . G . PASS END=191524128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 191524129 . T . PASS END=191524129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:26,0 chr2 191524130 . C . PASS END=191524131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 191524132 . C . PASS END=191524156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,941:0,68,255:26,0 chr2 191524157 . A . PASS END=191524159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 191524160 . G . PASS END=191524161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 191524162 . C . PASS END=191524173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 191524174 . T . PASS END=191524174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 191524175 . C . PASS END=191524187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1178:0,83,255:33,0 chr2 191524188 . A . PASS END=191524188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:31,0 chr2 191524189 . T . PASS END=191524197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1159:0,83,255:35,0 chr2 191524198 . T . PASS END=191524198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1202:0,72,255:33,0 chr2 191524199 . A . PASS END=191524284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1115:0,80,255:34,0 chr2 191524285 . C . PASS END=191524285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 191524286 . C . PASS END=191524345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,928:0,83,255:32,0 chr2 191524346 . G . PASS END=191524355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,80,255:26,0 chr2 191524356 . C . PASS END=191524359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 191524360 . A . PASS END=191524380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:25:0,63,945:0,67,255:25,0 chr2 191524381 . T . PASS END=191524381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:21,0 chr2 191524382 . C . PASS END=191524384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,845:0,69,255:23,0 chr2 191524385 . G . PASS END=191524385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 191524386 . C . PASS END=191524479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,764:0,62,255:25,0 chr2 191524480 . C . PASS END=191524481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 191524482 . G . PASS END=191524484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 191524485 . G . PASS END=191524488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 191524489 . C . PASS END=191524492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 191524493 . C . PASS END=191524721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:30:0,84,1260:0,88,255:40,0 chr2 191535052 . C . PASS END=191535067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:27:0,81,913:0,81,255:36,0 chr2 191535068 . C . PASS END=191535070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:37:0,75,1255:0,75,255:37,0 chr2 191535071 . C . PASS END=191535185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:41:0,84,1279:0,84,255:40,0 chr2 191537827 . G . PASS END=191537844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:81:0,120,1800:0,205,255:40,0 chr2 191537845 . A . PASS END=191537878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:76:0,120,1800:0,199,255:40,0 chr2 191548464 . G . PASS END=191548553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,120,1800:0,123,255:40,0 chr2 191550202 . C . PASS END=191550205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 191550206 . C . PASS END=191550220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 191550221 . C . PASS END=191550221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 191550222 . A . PASS END=191550226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:23,0 chr2 191550227 . A . PASS END=191550227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 191550228 . G . PASS END=191550231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,915:0,72,255:26,0 chr2 191550232 . G . PASS END=191550250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1005:0,81,255:30,0 chr2 191550251 . C . PASS END=191550251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:27,0 chr2 191550252 . T . PASS END=191550282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:32:0,84,1260:0,86,255:34,0 chr2 191550283 . A . PASS END=191550283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:30,0 chr2 191550284 . G . PASS END=191550323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1211:0,86,255:34,0 chr2 191550324 . C . PASS END=191550335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:25:0,68,1014:0,68,255:25,0 chr2 191550336 . C . PASS END=191550336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 191550337 . T . PASS END=191550337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 191550338 . T . PASS END=191550338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 191550339 . G . PASS END=191550356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 191550357 . T . PASS END=191550364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 191551927 . G . PASS END=191551934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,878:0,64,255:26,0 chr2 191551935 . C . PASS END=191551941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 191551942 . A . PASS END=191551947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,968:0,68,255:26,0 chr2 191551948 . G . PASS END=191551949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 191551950 . A . PASS END=191551950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 191551951 . T . PASS END=191551954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1042:0,87,255:30,0 chr2 191551955 . T . PASS END=191551963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1102:0,77,255:26,0 chr2 191551964 . G . PASS END=191552039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1053:0,86,255:37,0 chr2 191552040 . T . PASS END=191552043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:24,0 chr2 191554971 . A . PASS END=191555059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:54:0,107,1779:0,107,255:40,0 chr2 191745811 . A . PASS END=191745864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 191745865 . G . PASS END=191745865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 191745866 . C . PASS END=191745872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 191745873 . G . PASS END=191745894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,280:0,24,255:9,0 chr2 191745895 . C . PASS END=191745909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:5:0,12,180:0,15,186:6,0 chr2 191745910 . C . PASS END=191745953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,70:0,6,70:3,0 chr2 191745954 . G . PASS END=191746025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 191746026 . G . PASS END=191746058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,235:0,24,235:9,0 chr2 191746059 . G . PASS END=191746061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 191746062 . C . PASS END=191746064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 191746065 . G . PASS END=191746067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:12,0 chr2 191746068 . G . PASS END=191746090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 191746091 . T . PASS END=191746099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 191746100 . C . PASS END=191746103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr2 191746104 . T . LowGQ END=191746104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,410:10,0,255:13,0 chr2 191746105 . G . PASS END=191746173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,574:0,40,255:19,0 chr2 191746174 . G . PASS END=191746176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,40,255:13,0 chr2 191746177 . C . PASS END=191746177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,635:0,18,255:13,0 chr2 191746178 . T . PASS END=191746184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:14,0 chr2 191746185 . C . PASS END=191746186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 191746187 . C . PASS END=191746187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:12,0 chr2 191746188 . A . PASS END=191746188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 191746189 . G . PASS END=191746189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:12,0 chr2 191746190 . G . PASS END=191746190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 191746191 . T . PASS END=191746191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 191746192 . G . PASS END=191746192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:12,0 chr2 191746193 . A . PASS END=191746195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 191746196 . A . PASS END=191746196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 191759878 . T . PASS END=191759974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:60:0,120,1800:0,173,255:40,0 chr2 191760330 . G . PASS END=191760451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:38:0,108,1427:0,110,255:40,0 chr2 191765290 . A . PASS END=191765419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:44:0,109,1665:0,109,255:40,0 chr2 191766673 . G . PASS END=191766752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:44:0,108,1620:0,116,255:40,0 chr2 191769730 . G . PASS END=191769730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 191769731 . C . PASS END=191769731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:21,0 chr2 191769732 . A . PASS END=191769732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 191769733 . T . PASS END=191769733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 191769734 . T . PASS END=191769734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 191769735 . C . PASS END=191769738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 191769739 . T . PASS END=191769739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:33,0 chr2 191769740 . G . PASS END=191769873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:83:37:0,83,1365:0,83,255:40,0 chr2 191769874 . A . PASS END=191769874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:71:46:0,71,1293:0,71,255:40,0 chr2 191769875 . C . PASS END=191769893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:44:0,83,1521:0,83,255:40,0 chr2 191773718 . T . PASS END=191773726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,131,255:40,0 chr2 191774989 . A . PASS END=191775038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:68:0,120,1800:0,194,255:40,0 chr2 191775039 . C . PASS END=191775047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:92:0,120,1800:0,252,255:40,0 chr2 191777919 . G . PASS END=191777930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,182,255:40,0 chr2 191785750 . C . PASS END=191785782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:80:0,120,1800:0,241,255:40,0 chr2 191785871 . G . PASS END=191785929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:73:0,120,1800:0,194,255:40,0 chr2 191788643 . G . PASS END=191788709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,191,255:40,0 chr2 191789269 . T . PASS END=191789319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:70:0,120,1800:0,210,255:40,0 chr2 191792032 . C . PASS END=191792033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,953:0,75,255:25,0 chr2 191792034 . G . PASS END=191792208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:80:27:0,80,994:0,80,255:40,0 chr2 191795163 . G . PASS END=191795290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:35:0,92,1332:0,92,255:40,0 chr2 191795291 . T . PASS END=191795291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:31,0 chr2 191795292 . C . PASS END=191795294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:31,0 chr2 191796271 . G . PASS END=191796363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,162,255:40,0 chr2 191797383 . C . PASS END=191797412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:55:0,120,1800:0,165,255:40,0 chr2 191797442 . C . PASS END=191797585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:81:34:0,81,1215:0,89,255:40,0 chr2 191797586 . T . PASS END=191797588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,96,255:25,0 chr2 191818291 . G . PASS END=191818352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:81:0,120,1800:0,227,255:40,0 chr2 191819310 . A . PASS END=191819386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,99,1429:0,114,255:40,0 chr2 191819481 . G . PASS END=191819544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,108,1620:0,110,255:40,0 chr2 191827556 . G . PASS END=191827752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:35:0,105,1319:0,105,255:40,0 chr2 191833801 . T . PASS END=191833801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1201:0,96,255:32,0 chr2 191833915 . T . PASS END=191833915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 191833947 . T . PASS END=191833947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 191833956 . G . PASS END=191833956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 191834112 . C . PASS END=191834112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 191834131 . T . PASS END=191834131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,704:0,33,255:19,0 chr2 191834169 . T . PASS END=191834169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:20,0 chr2 191834242 . G . PASS END=191834242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr2 191834254 . T . PASS END=191834254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 191834266 . A . PASS END=191834266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1643:0,116,255:40,0 chr2 191834275 . G . PASS END=191834275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 191834335 . C . PASS END=191834335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 191834363 . G . PASS END=191834363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 191834417 . T . PASS END=191834417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 191834470 . C . PASS END=191834470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 191834497 . T . PASS END=191834497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 191834508 . C . PASS END=191834508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 191834574 . C . PASS END=191834574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 191834759 . A . PASS END=191834759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 191834784 . A . PASS END=191834784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,184,255:40,0 chr2 191834967 . A . PASS END=191834968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:47:0,117,1755:0,141,255:40,0 chr2 191835066 . T . PASS END=191835066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,108,1620:0,109,255:35,0 chr2 191835067 . A . PASS END=191835067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1449:0,79,255:35,0 chr2 191835148 . G . PASS END=191835148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 191835292 . A . PASS END=191835292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 191835308 . G . PASS END=191835308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,190,255:40,0 chr2 191835429 . C . PASS END=191835443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:81:0,120,1800:0,244,255:40,0 chr2 191839418 . T . PASS END=191839422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 191839423 . T . PASS END=191839430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:12:0,21,315:0,22,255:8,0 chr2 191839431 . G . PASS END=191839434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr2 191839435 . T . PASS END=191839435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 191839436 . C . PASS END=191839470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,513:0,41,255:18,0 chr2 191839471 . G . PASS END=191839493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,725:0,60,255:22,0 chr2 191839494 . C . PASS END=191839494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 191839495 . T . PASS END=191839498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,814:0,63,255:22,0 chr2 191839499 . T . PASS END=191839499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 191839500 . G . PASS END=191839503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:24,0 chr2 191839504 . C . PASS END=191839504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 191839505 . T . PASS END=191839514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,892:0,72,255:26,0 chr2 191839515 . C . PASS END=191839531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr2 191839532 . A . PASS END=191839532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1274:0,77,255:31,0 chr2 191839533 . C . PASS END=191839658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:33:0,88,1195:0,88,255:40,0 chr2 191840099 . T . PASS END=191840114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,102,1530:0,114,255:40,0 chr2 191840157 . C . PASS END=191840160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 191840534 . T . PASS END=191840634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:37:0,80,1215:0,80,255:40,0 chr2 191840635 . A . PASS END=191840637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:66:42:0,66,990:0,110,255:24,0 chr2 191841558 . C . PASS END=191841558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 191841566 . C . PASS END=191841751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:28:0,84,1072:0,84,255:40,0 chr2 191843295 . T . PASS END=191843332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:63:0,120,1800:0,160,255:40,0 chr2 191843582 . C . PASS END=191843625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1180:0,87,255:40,0 chr2 191843626 . C . PASS END=191843626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1371:0,73,255:36,0 chr2 191843627 . C . PASS END=191843658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1454:0,104,255:40,0 chr2 191843659 . A . PASS END=191843659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1300:0,70,255:35,0 chr2 191843660 . A . PASS END=191843687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,85,255:35,0 chr2 191843688 . G . PASS END=191843690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:24,0 chr2 191843691 . A . PASS END=191843699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:27:0,57,855:0,81,255:19,0 chr2 191843700 . C . PASS END=191843701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:20,0 chr2 191843702 . C . PASS END=191843716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:16:0,42,630:0,47,255:17,0 chr2 191843717 . C . PASS END=191843717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 191843718 . C . PASS END=191843718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr2 191843719 . A . PASS END=191843719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 191843720 . T . PASS END=191843724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr2 191843725 . C . PASS END=191843725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:9,0 chr2 191843726 . A . PASS END=191843727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 191844498 . C . PASS END=191844511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,132,255:40,0 chr2 191844512 . A C, 47.96 PASS DP=61;MQ=249.42;MQRankSum=6.064;ReadPosRankSum=0.257;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,25,0:0.410,0.000:61:18,9,0:18,16,0:46:83,0,47,183,183,183:255,0,255:34,0:4.7961e+01,1.1286e-04,5.0000e+01,1.8273e+02,2.1750e+02,1.8574e+02:0.00,34.77,37.78,34.77,69.54,37.78:22,14,20,5:26,10,6,19 chr2 191844513 . G . PASS END=191844549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:61:0,120,1800:0,153,255:40,0 chr2 191844550 . C . PASS END=191844592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,136,255:40,0 chr2 191845340 . C . PASS END=191845340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 191845346 . C . PASS END=191845395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:49:0,120,1800:0,142,255:40,0 chr2 191847109 . C . PASS END=191847113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 191847114 . A . PASS END=191847120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,895:0,67,255:26,0 chr2 191847121 . C . PASS END=191847235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1119:0,89,255:40,0 chr2 191847236 . G . PASS END=191847236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:32,0 chr2 191847237 . G . PASS END=191847244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:33,0 chr2 191848368 . C . PASS END=191848455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1213:0,80,255:39,0 chr2 191848456 . A . PASS END=191848484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,939:0,78,255:26,0 chr2 191849033 . T . PASS END=191849033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 191849036 . C . PASS END=191849119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,120,1800:0,122,255:40,0 chr2 191850341 . T . PASS END=191850341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 191850345 . C . PASS END=191850386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:61:0,120,1800:0,176,255:40,0 chr2 191850389 . A . PASS END=191850389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 191850391 . A . PASS END=191850391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 191851580 . C . PASS END=191851673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:95:36:0,95,1379:0,95,255:40,0 chr2 191851761 . G . PASS END=191851761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,255,255:40,0 chr2 191851765 . C . PASS END=191851794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:78:0,120,1800:0,202,255:40,0 chr2 191854341 . T . PASS END=191854400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,1:114:99:106:0,120,1800:0,255,255:40,0 chr2 191854403 . G . PASS END=191854403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:106:0,120,1800:0,255,255:40,0 chr2 191855954 . C . PASS END=191855954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 191855955 . T . PASS END=191855955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 191855956 . C . PASS END=191855962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,725:0,63,255:21,0 chr2 191855963 . A . PASS END=191855963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 191855964 . C . PASS END=191855964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 191855965 . A . PASS END=191855966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,768:0,52,255:23,0 chr2 191855967 . T . PASS END=191855980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,876:0,72,255:26,0 chr2 191855981 . G . PASS END=191855992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr2 191855993 . A . PASS END=191855993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 191855994 . G . PASS END=191855994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 191855995 . C . PASS END=191855998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 191855999 . C . PASS END=191856001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 191856002 . T . PASS END=191856004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 191856005 . G . PASS END=191856006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 191856007 . G . PASS END=191856007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 191856008 . T . PASS END=191856008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:26,0 chr2 191856009 . G . PASS END=191856018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:26,0 chr2 191856019 . G . PASS END=191856019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:23,0 chr2 191856020 . C . PASS END=191856035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,65,255:22,0 chr2 191856036 . C . PASS END=191856036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 191856037 . C . PASS END=191856041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 191856042 . A . PASS END=191856042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,603:0,49,255:20,0 chr2 191856043 . C . PASS END=191856043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 191856044 . G . PASS END=191856044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 191856045 . A . PASS END=191856046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 191856051 . A . PASS END=191856051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 191859783 . T . PASS END=191859783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 191859787 . C . PASS END=191859908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:88:32:0,88,1210:0,88,255:40,0 chr2 191859909 . C . PASS END=191859909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:67:51:0,67,1753:0,67,255:40,0 chr2 191859910 . C . PASS END=191859942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:40:0,99,1485:0,108,255:40,0 chr2 191859943 . A . PASS END=191859943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:32,0 chr2 191859944 . A . PASS END=191859945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,113,255:32,0 chr2 191859957 . C . PASS END=191859957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 191862582 . C . PASS END=191862583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 191862584 . G . PASS END=191862589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1015:0,84,255:28,0 chr2 191862590 . C . PASS END=191862590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 191862591 . A . PASS END=191862595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 191862596 . A . PASS END=191862600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 191862601 . A . PASS END=191862603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 191862604 . A . PASS END=191862604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 191862605 . A . PASS END=191862707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1172:0,87,255:40,0 chr2 191862708 . A . PASS END=191862711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 191862712 . C . PASS END=191862712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:24,0 chr2 191862713 . T . PASS END=191862733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 191862943 . C . PASS END=191863034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:91:41:0,91,1530:0,91,255:40,0 chr2 191864352 . C . PASS END=191864430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:71:0,120,1800:0,207,255:40,0 chr2 191865800 . C . PASS END=191865889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:36:0,108,1252:0,108,255:40,0 chr2 191872276 . G . PASS END=191872276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 191872289 . C . PASS END=191872387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:50:0,110,1800:0,110,255:40,0 chr2 191872391 . G . PASS END=191872391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 191873689 . C . PASS END=191873699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:87:35:0,87,1238:0,87,255:40,0 chr2 191873700 . G . PASS END=191873700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1488:0,71,255:39,0 chr2 191873701 . C . PASS END=191873869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,110,1535:0,110,255:40,0 chr2 191874602 . C . PASS END=191874607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,911:0,81,255:29,0 chr2 191874608 . T . PASS END=191874608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 191874609 . G . PASS END=191874629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1041:0,87,255:40,0 chr2 191874630 . G . PASS END=191874666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,121,255:40,0 chr2 191874667 . A G, 48.37 PASS DP=58;MQ=250.00;MQRankSum=6.469;ReadPosRankSum=1.617;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,25,0:0.431,0.000:58:11,13,0:22,12,0:47:83,0,50,886,1164,2050:255,0,255:30,0:4.8373e+01,8.4907e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,22,14,11:19,14,18,7 chr2 191874668 . A . PASS END=191874704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,141,255:40,0 chr2 191874705 . G . PASS END=191874730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,134,255:40,0 chr2 191875093 . C . PASS END=191875097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,182,255:40,0 chr2 191878415 . A . PASS END=191878415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,130,255:40,0 chr2 191878783 . C . PASS END=191878783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 191878856 . G . PASS END=191878856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 191878881 . G . PASS END=191878881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 191878894 . A . PASS END=191878894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 191878908 . G . PASS END=191878908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 191878956 . C . PASS END=191878956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 191894566 . T . PASS END=191894592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:68:0,120,1800:0,171,255:40,0 chr2 191895698 . T . PASS END=191895806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:59:0,120,1800:0,151,255:40,0 chr2 191896176 . A . PASS END=191896242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:52:0,120,1800:0,156,255:40,0 chr2 191897684 . C . PASS END=191897684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 191897685 . T . PASS END=191897685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 191897686 . T . PASS END=191897691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 191897692 . G . PASS END=191897692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1110:0,62,255:29,0 chr2 191897693 . G . PASS END=191897839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:33:0,84,1260:0,96,255:40,0 chr2 191897840 . T . PASS END=191897840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:56:35:0,56,1167:0,56,255:26,0 chr2 191897841 . A . PASS END=191897844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,88,255:29,0 chr2 191897845 . T . PASS END=191897861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,75,255:25,0 chr2 191897862 . G . PASS END=191897862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,874:0,59,255:19,0 chr2 191897863 . A . PASS END=191897866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 191897867 . T . PASS END=191897867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:19,0 chr2 191897868 . C . PASS END=191897871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 191897872 . T . PASS END=191897873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 191897874 . C . PASS END=191897875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 191898216 . C . PASS END=191898223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1127:0,83,255:33,0 chr2 191898224 . G . PASS END=191898224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:32,0 chr2 191898225 . A . PASS END=191898347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:91:34:0,91,1251:0,91,255:40,0 chr2 191898348 . C . PASS END=191898352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr2 191898637 . C . PASS END=191898731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,122,255:40,0 chr2 191899274 . C . PASS END=191899323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:97:57:0,97,1800:0,97,255:40,0 chr2 191900890 . C . PASS END=191901025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:82:39:0,82,1377:0,82,255:40,0 chr2 191903619 . T . PASS END=191903687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,132,255:40,0 chr2 191903925 . C . PASS END=191904023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:39:0,96,1402:0,96,255:40,0 chr2 191905791 . C . PASS END=191905870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:45:0,90,1350:0,119,255:40,0 chr2 191905871 . A . PASS END=191905871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1423:0,71,255:30,0 chr2 191905872 . G . PASS END=191905874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:42:0,88,1395:0,88,255:31,0 chr2 191919216 . C . PASS END=191919260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:57:0,112,1800:0,112,255:40,0 chr2 191922744 . C . PASS END=191922759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,845:0,66,255:25,0 chr2 191922760 . A . PASS END=191922765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,994:0,81,255:29,0 chr2 191922766 . A . PASS END=191922766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,918:0,70,255:28,0 chr2 191922767 . G . PASS END=191922767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 191922768 . A . PASS END=191922768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,846:0,54,255:27,0 chr2 191922769 . C . PASS END=191922803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:31:0,85,1157:0,85,255:40,0 chr2 191922804 . G . PASS END=191922817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:41:0,98,1497:0,98,255:40,0 chr2 191922818 . A . PASS END=191922818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1551:0,77,255:40,0 chr2 191922819 . A . PASS END=191922837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,111,1193:0,111,255:40,0 chr2 191922928 . C . PASS END=191922945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:79:0,120,1800:0,207,255:40,0 chr2 191923436 . T . PASS END=191923495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:47:0,110,1684:0,110,255:40,0 chr2 191926455 . C . PASS END=191926455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 191926456 . T . PASS END=191926456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,831:0,45,255:24,0 chr2 191926457 . T . PASS END=191926457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 191926458 . A . PASS END=191926458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 191926459 . G . PASS END=191926460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 191926461 . T . PASS END=191926461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 191926462 . T . PASS END=191926470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1057:0,87,255:29,0 chr2 191926471 . A . PASS END=191926471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,890:0,73,255:28,0 chr2 191926472 . C . PASS END=191926474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 191926475 . A . PASS END=191926475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1088:0,62,255:29,0 chr2 191926476 . A . PASS END=191926478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 191926479 . A . PASS END=191926479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:28,0 chr2 191926480 . G . PASS END=191926484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 191926485 . T . PASS END=191926485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 191926486 . T . PASS END=191926507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1133:0,82,255:32,0 chr2 191926508 . G . PASS END=191926527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:61:25:0,61,884:0,61,255:26,0 chr2 191926528 . G . PASS END=191926528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr2 191926529 . T . PASS END=191926538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 191926539 . A . PASS END=191926539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 191926540 . C . PASS END=191926547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 191927488 . T . PASS END=191927638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:81:45:0,81,1215:0,119,255:40,0 chr2 191927639 . G . PASS END=191927646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:72:39:0,72,1080:0,100,255:26,0 chr2 191929533 . C . PASS END=191929534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 191929535 . G . PASS END=191929535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr2 191929536 . T . PASS END=191929537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1058:0,93,255:31,0 chr2 191929538 . C . PASS END=191929538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,970:0,60,255:29,0 chr2 191929539 . T . PASS END=191929540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1014:0,93,255:31,0 chr2 191929541 . A . PASS END=191929541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 191929542 . A . PASS END=191929672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:31:0,80,977:0,80,255:40,1 chr2 191929673 . A . PASS END=191929684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1039:0,71,255:25,0 chr2 191931156 . C . PASS END=191931241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:49:0,120,1792:0,120,255:40,0 chr2 191933289 . T . PASS END=191933320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:63:0,120,1800:0,137,255:40,0 chr2 191934419 . C . PASS END=191934497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,0:107:99:81:0,120,1800:0,236,255:40,0 chr2 191937824 . C . PASS END=191937916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,109,1742:0,109,255:40,0 chr2 191940953 . C . PASS END=191941011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:39:0,99,1435:0,99,255:40,0 chr2 191941012 . T . PASS END=191941023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:87:47:0,87,1305:0,125,255:40,0 chr2 191941024 . C . PASS END=191941051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,86,255:25,0 chr2 191964633 . T G, 211.15 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,29,0:0,26,0:161:249,164,0,2044,164,2044:255,165,0:0,0:2.1115e+02,1.6115e+02,0.0000e+00,4.5000e+02,1.9592e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,33,22:0,0,27,28 chr2 191996546 . C . PASS END=191996555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,135,255:40,0 chr2 191996556 . G . PASS END=191996626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,108,1678:0,108,255:40,0 chr2 192011339 . C . PASS END=192011440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:44:0,120,1800:0,124,255:40,0 chr2 192011441 . A . PASS END=192011483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:58:0,102,1530:0,158,255:40,0 chr2 192012802 . C . PASS END=192012929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:38:0,84,1260:0,110,255:40,0 chr2 192112684 . A . PASS END=192112734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,100,1180:0,100,255:40,0 chr2 192141613 . C . PASS END=192141756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:84:38:0,84,1350:0,84,255:40,0 chr2 192160837 . A . PASS END=192160838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,132,255:40,0 chr2 192160839 . A T, 49.29 PASS DP=46;MQ=250.00;MQRankSum=5.778;ReadPosRankSum=3.198;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,21,0:0.457,0.000:46:11,13,0:14,8,0:48:84,0,50,714,878,1592:255,0,255:23,0:4.9285e+01,7.2999e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,12,14,7:17,8,12,9 chr2 192160840 . T . PASS END=192160874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:94:47:0,94,1659:0,94,255:40,0 chr2 192160875 . C T, 46.58 PASS DP=75;MQ=250.00;MQRankSum=7.295;ReadPosRankSum=4.364;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:45,30,0:0.400,0.000:75:22,19,0:23,11,0:46:81,0,50,1072,1563,2635:255,0,255:40,0:4.6583e+01,1.1701e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:24,21,13,17:23,22,10,20 chr2 192160876 . C . PASS END=192160912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,210,255:40,0 chr2 192160913 . A . PASS END=192160952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,209,255:40,0 chr2 192194661 . C . PASS END=192194755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,102,1376:0,102,255:40,0 chr2 192206187 . A . PASS END=192206291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:44:0,116,1582:0,116,255:40,0 chr2 192210962 . C . PASS END=192211008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:89:0,120,1800:0,227,255:40,0 chr2 192214888 . G . PASS END=192214951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:76:0,120,1800:0,218,255:40,0 chr2 192225357 . A . PASS END=192225434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:44:0,99,1440:0,99,255:40,0 chr2 192225435 . G . PASS END=192225455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,4:61:94:52:0,94,1800:0,94,255:40,0 chr2 192226994 . A . PASS END=192227097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,120,1800:0,121,255:40,0 chr2 192228454 . A . PASS END=192228601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:35:0,82,1233:0,82,255:40,0 chr2 192228884 . A . PASS END=192229002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,108,1620:0,131,255:40,0 chr2 192234268 . G . PASS END=192234354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,162,255:40,0 chr2 192234953 . G . PASS END=192235018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:92:0,120,1800:0,246,255:40,0 chr2 192243993 . A . PASS END=192243998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,171,255:40,0 chr2 192246188 . G . PASS END=192246292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:81:50:0,81,1731:0,81,255:40,0 chr2 192248006 . G . PASS END=192248068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:70:0,120,1800:0,175,255:40,0 chr2 192250610 . A . PASS END=192250613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,984:0,65,255:26,0 chr2 192250614 . C . PASS END=192250688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:28:0,81,992:0,84,255:40,2 chr2 192250689 . A . PASS END=192250725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,173,255:40,0 chr2 192250726 . G A, 235.68 PASS DP=63;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,63,0:1.000,0.000:63:0,28,0:0,35,0:186:273,189,0,2344,189,2344:255,189,0:0,0:2.3568e+02,1.8568e+02,0.0000e+00,4.5000e+02,2.2045e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,36:0,0,30,33 chr2 192250727 . A . PASS END=192250763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,143,255:40,0 chr2 192250764 . C . PASS END=192250791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:36:0,93,1349:0,95,255:40,0 chr2 192250792 . C . PASS END=192250808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:61:26:0,61,814:0,61,255:26,0 chr2 192250809 . A . PASS END=192250810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,77,255:18,0 chr2 192251950 . G . PASS END=192251981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,955:0,84,255:31,0 chr2 192251982 . A . PASS END=192251982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 192251983 . A . PASS END=192252060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1109:0,80,255:34,0 chr2 192252061 . G . PASS END=192252071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 192252072 . C . PASS END=192252076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 192252077 . A . PASS END=192252077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 192252078 . G . PASS END=192252078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 192252079 . A . PASS END=192252080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 192252081 . C . PASS END=192252082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 192252083 . A . PASS END=192252083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,979:0,73,255:29,0 chr2 192252084 . C . PASS END=192252086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 192252087 . G . PASS END=192252087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 192252088 . A . PASS END=192252094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 192252095 . C . PASS END=192252096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1139:0,77,255:26,0 chr2 192252097 . C . PASS END=192252110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:32,0 chr2 192252111 . A . PASS END=192252111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 192252112 . C . PASS END=192252120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1125:0,80,255:30,0 chr2 192252121 . G . PASS END=192252123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:30:0,78,1170:0,90,255:26,0 chr2 192252124 . T . PASS END=192252124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 192252125 . C . PASS END=192252136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,947:0,64,255:26,0 chr2 192252137 . T . PASS END=192252137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:23,0 chr2 192252138 . G . PASS END=192252144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:26,0 chr2 192252145 . A . PASS END=192252155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,956:0,84,255:28,0 chr2 192252156 . C . PASS END=192252159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 192252160 . A . PASS END=192252162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 192252163 . C . PASS END=192252176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,873:0,62,255:26,0 chr2 192255018 . G . PASS END=192255166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:29:0,85,1094:0,85,255:40,0 chr2 192255167 . G . PASS END=192255167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr2 192255168 . A . PASS END=192255170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1251:0,91,255:33,0 chr2 192255171 . C . PASS END=192255171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 192255172 . A . PASS END=192255200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1235:0,88,255:35,0 chr2 192255201 . T . PASS END=192255201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:26,0 chr2 192255202 . T . PASS END=192255202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:27,0 chr2 192255203 . G . PASS END=192255215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:27:0,69,1035:0,74,255:26,0 chr2 192255216 . C . PASS END=192255216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:23,0 chr2 192255217 . A . PASS END=192255218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 192256834 . G . PASS END=192256927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:45:0,120,1800:0,128,255:40,0 chr2 192257799 . T . PASS END=192257800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 192257801 . A . PASS END=192257801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 192257802 . T . PASS END=192257802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 192257803 . T . PASS END=192257821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:30,0 chr2 192257822 . G . PASS END=192257822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 192257823 . A . PASS END=192257897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:90:30:0,90,1147:0,90,255:40,0 chr2 192257898 . C . PASS END=192257898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1373:0,73,255:35,0 chr2 192257899 . T . PASS END=192257919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1275:0,81,255:38,0 chr2 192257920 . T . PASS END=192257920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1194:0,75,255:30,0 chr2 192257921 . G . PASS END=192257924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1229:0,89,255:32,0 chr2 192257925 . G . PASS END=192257925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:28,0 chr2 192257926 . C . PASS END=192257930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:30,0 chr2 192257931 . T . PASS END=192257939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:31:0,60,986:0,60,255:26,0 chr2 192257940 . A . PASS END=192257940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1027:0,54,255:23,0 chr2 192257941 . G . PASS END=192257941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 192257942 . A . PASS END=192257942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,901:0,50,255:23,0 chr2 192257943 . T . PASS END=192257948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:25:0,63,939:0,64,255:24,0 chr2 192261155 . C . PASS END=192261223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,168,255:40,0 chr2 192265108 . G . PASS END=192265194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:40:0,98,1369:0,98,255:40,0 chr2 192265475 . G . PASS END=192265561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:50:0,114,1710:0,134,255:40,0 chr2 192267358 . G . PASS END=192267444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,108,1679:0,108,255:40,0 chr2 192272841 . G . PASS END=192272915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:93:0,120,1800:0,216,255:40,0 chr2 192273770 . G . PASS END=192273900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,99,1485:0,122,255:40,0 chr2 192273901 . G . PASS END=192273904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:75:38:0,75,1125:0,101,255:26,0 chr2 192275791 . G . PASS END=192275898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:60:0,120,1800:0,145,255:40,1 chr2 192278774 . T . PASS END=192278906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:35:0,99,1327:0,102,255:40,0 chr2 192279243 . A . PASS END=192279289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,113,1626:0,113,255:40,0 chr2 192279290 . T . PASS END=192279326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,152,255:40,0 chr2 192279327 . T C, 223.65 PASS DP=60;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,59,0:1.000,0.000:59:0,32,0:0,27,0:174:261,177,0,2216,177,2216:255,177,0:0,0:2.2365e+02,1.7365e+02,0.0000e+00,4.5000e+02,2.0842e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,38:0,0,24,35 chr2 192279328 . T . PASS END=192279364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:46:0,120,1800:0,122,255:40,0 chr2 192279365 . T . PASS END=192279395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:32:0,90,1350:0,96,255:40,0 chr2 192280841 . G . PASS END=192281023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:42:0,120,1800:0,124,255:40,0 chr2 192288563 . G . PASS END=192288686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:57:0,120,1800:0,144,255:40,0 chr2 192543341 . A . PASS END=192543431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,137,255:40,0 chr2 192543716 . G . PASS END=192543854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:96:43:0,96,1440:0,116,255:40,0 chr2 192546672 . G . PASS END=192546743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:63:0,120,1800:0,157,255:40,0 chr2 192547218 . T . PASS END=192547320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1186:0,83,255:40,0 chr2 192548455 . A . PASS END=192548530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:58:0,120,1800:0,152,255:40,0 chr2 192548956 . G . PASS END=192549022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:68:0,120,1800:0,195,255:40,0 chr2 192550325 . G . PASS END=192550494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:28:0,81,1047:0,84,255:40,0 chr2 192658008 . A . PASS END=192658147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:88:37:0,88,1349:0,88,255:40,0 chr2 192658148 . C . PASS END=192658184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:42:0,108,1391:0,109,255:40,0 chr2 192658185 . C T, 49.85 PASS DP=42;MQ=249.24;MQRankSum=5.528;ReadPosRankSum=3.186;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:9,13,0:13,7,0:48:85,0,50,715,758,1473:255,0,255:20,0:4.9845e+01,6.6786e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,15,8,12:12,10,15,5 chr2 192676247 . A . PASS END=192676367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:37:0,90,1350:0,102,255:40,0 chr2 192679069 . T . PASS END=192679165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:41:0,120,1800:0,123,255:40,0 chr2 192684687 . A . PASS END=192684731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:79:0,120,1800:0,221,255:40,0 chr2 192700649 . T . PASS END=192700656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1008:0,68,255:28,0 chr2 192700657 . T . PASS END=192700657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1047:0,46,255:27,0 chr2 192700658 . C . PASS END=192700668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1141:0,80,255:31,0 chr2 192700669 . G . PASS END=192700669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:29,0 chr2 192700670 . G . PASS END=192700780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:34:0,85,1175:0,85,255:40,0 chr2 192700781 . C . PASS END=192700781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:31,0 chr2 192700782 . T . PASS END=192700853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:91:35:0,91,1235:0,91,255:40,0 chr2 192700854 . T . PASS END=192700854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:34,0 chr2 192700855 . T . PASS END=192700855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1234:0,91,255:34,0 chr2 192700856 . C . PASS END=192700856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:36,0 chr2 192700857 . T . PASS END=192700875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:36,0 chr2 192700876 . T . PASS END=192700876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1223:0,53,255:33,0 chr2 192700877 . T . PASS END=192700877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:35,0 chr2 192700878 . T . PASS END=192701091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:36:0,80,1321:0,80,255:40,0 chr2 192701092 . G . PASS END=192701093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:34,0 chr2 192701094 . T . PASS END=192701341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:35:0,93,1244:0,94,255:40,0 chr2 192701342 . T . PASS END=192701342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:54:41:0,54,1382:0,54,255:35,0 chr2 192701343 . T . PASS END=192701355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1435:0,104,255:37,0 chr2 192701356 . T . PASS END=192701374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1388:0,98,255:37,0 chr2 192701375 . C . PASS END=192701375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1337:0,78,255:36,0 chr2 192701376 . T . PASS END=192701392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1294:0,92,255:37,0 chr2 192701393 . A G, 49.44 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=3.957;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,16,0:0.457,0.000:35:8,13,0:11,3,0:48:84,0,50,572,671,1244:255,0,255:17,0:4.9438e+01,7.1187e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,7,4,12:11,8,5,11 chr2 192701394 . C . PASS END=192701423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1103:0,80,255:32,0 chr2 192701424 . G . PASS END=192701430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 192701431 . T . PASS END=192701443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:24,0 chr2 192711169 . C . PASS END=192711175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 192711176 . A . PASS END=192711176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:20,0 chr2 192711177 . T . PASS END=192711182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 192711183 . C . PASS END=192711183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:22,0 chr2 192711184 . T . PASS END=192711199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:24,0 chr2 192711200 . C . PASS END=192711209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr2 192711210 . G . PASS END=192711217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1116:0,84,255:29,0 chr2 192711218 . T . PASS END=192711218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 192711219 . T . PASS END=192711225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 192711226 . C . PASS END=192711226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 192711227 . A . PASS END=192711228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 192711229 . C . PASS END=192711229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 192711230 . C . PASS END=192711239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:29,0 chr2 192711240 . G . PASS END=192711240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 192711241 . T . PASS END=192711243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 192711244 . G . PASS END=192711261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,831:0,69,255:26,0 chr2 192711262 . C . PASS END=192711282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,659:0,41,255:19,0 chr2 192711283 . G . PASS END=192711287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 192711288 . T . PASS END=192711320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,729:0,57,255:19,0 chr2 192711321 . C . PASS END=192711321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 192711322 . C . PASS END=192711323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 192711324 . T . PASS END=192711343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 192711344 . T . PASS END=192711355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 192711356 . T . PASS END=192711382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,840:0,66,255:25,0 chr2 192711383 . A . PASS END=192711383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 192711384 . C . PASS END=192711385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 192711386 . G . PASS END=192711386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 192711387 . A . PASS END=192711392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:26,0 chr2 192711393 . C . PASS END=192711395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 192711396 . A . PASS END=192711396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 192711397 . A . PASS END=192711398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,944:0,84,255:28,0 chr2 192711399 . T . PASS END=192711399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr2 192711400 . G . PASS END=192711403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1011:0,84,255:28,0 chr2 192711404 . T . PASS END=192711404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 192711405 . G . PASS END=192711454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:29:0,82,1111:0,82,255:35,0 chr2 192711455 . A . PASS END=192711455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1272:0,77,255:33,0 chr2 192711456 . C . PASS END=192711637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:32:0,84,1150:0,86,255:40,0 chr2 192711638 . G . PASS END=192711651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:64:27:0,64,925:0,64,255:26,0 chr2 192815037 . T . PASS END=192815133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:90:39:0,90,1269:0,90,255:40,0 chr2 192815178 . C . PASS END=192815190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:56:0,120,1800:0,152,255:40,0 chr2 192818405 . C . PASS END=192818554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:88:54:0,88,1758:0,88,255:40,0 chr2 192818555 . G . PASS END=192818555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:48:51:0,48,1499:0,48,255:37,0 chr2 192818556 . C . PASS END=192818557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:51:0,81,1743:0,81,255:40,0 chr2 192818558 . T . PASS END=192818558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:50:51:0,50,1605:0,50,255:37,0 chr2 192818559 . C . PASS END=192818559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,117,1755:0,134,255:38,0 chr2 192818560 . A . PASS END=192818563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:86:49:0,86,1645:0,86,255:40,0 chr2 192820981 . C . PASS END=192820982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,939:0,78,255:26,0 chr2 192820983 . G . PASS END=192820990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:28,0 chr2 192820991 . G . PASS END=192820991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 192820992 . C . PASS END=192821104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:29:0,80,1064:0,80,255:40,0 chr2 192854221 . C . PASS END=192854276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,153,255:40,0 chr2 192862988 . C . PASS END=192863047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:81:0,120,1800:0,226,255:40,0 chr2 192863786 . C . PASS END=192863934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:93:39:0,93,1395:0,117,255:40,0 chr2 192922405 . C . PASS END=192922501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:38:0,84,1365:0,84,255:40,0 chr2 193044305 . T . PASS END=193044420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:65:0,120,1800:0,182,255:40,0 chr2 193049080 . C . PASS END=193049209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:40:0,93,1395:0,104,255:40,0 chr2 193056606 . C . PASS END=193056699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,115,1656:0,115,255:40,0 chr2 193056700 . T . PASS END=193056715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,120,1800:0,142,255:40,0 chr2 193059079 . C . PASS END=193059079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 193059080 . A . PASS END=193059080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 193059081 . G . PASS END=193059085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 193059086 . A . PASS END=193059087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 193059088 . T . PASS END=193059088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 193059089 . C . PASS END=193059103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:31,0 chr2 193059104 . T . PASS END=193059104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1009:0,76,255:29,0 chr2 193059105 . T . PASS END=193059107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 193059108 . C . PASS END=193059108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 193059109 . A . PASS END=193059138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1131:0,80,255:35,0 chr2 193059139 . G . PASS END=193059139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:33,0 chr2 193059140 . C . PASS END=193059173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1247:0,86,255:34,0 chr2 193059174 . G . PASS END=193059189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:24,0 chr2 193059190 . A . PASS END=193059190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 193059191 . G . PASS END=193059192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 193059193 . A . PASS END=193059193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 193059194 . A . PASS END=193059194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 193059195 . A . PASS END=193059195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr2 193059196 . A . PASS END=193059197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 193059198 . C . PASS END=193059198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:19,0 chr2 193059199 . C . PASS END=193059199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 193059200 . C . PASS END=193059200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 193059201 . T . PASS END=193059201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 193059202 . C . PASS END=193059202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:21,0 chr2 193059203 . G . PASS END=193059204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 193059205 . A . PASS END=193059215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,46,255:16,0 chr2 193059216 . C . PASS END=193059216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 193059217 . T . PASS END=193059218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 193059219 . C . PASS END=193059223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:12,0 chr2 193059224 . C . PASS END=193059236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr2 193059237 . T . PASS END=193059250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:6:0,15,225:0,18,233:6,0 chr2 196522144 . A . PASS END=196522164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,172:0,15,172:6,0 chr2 196522165 . C . PASS END=196522248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,241:0,21,241:8,0 chr2 196522249 . T . PASS END=196522273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:8,0 chr2 196522274 . G . PASS END=196522274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr2 196522275 . G . PASS END=196522285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 196522286 . A G, 68.14 PASS DP=7;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,7,0:1.000,0.000:7:0,4,0:0,3,0:18:106,21,0,271,21,271:255,21,0:0,0:6.8135e+01,1.8135e+01,6.7260e-02,2.6844e+02,5.2905e+01,2.7144e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,4:0,0,4,3 chr2 196522287 . T . PASS END=196522297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 196522298 . T . PASS END=196522315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,210:0,18,210:6,0 chr2 196522316 . C . PASS END=196522317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 196522318 . T . PASS END=196522323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 196522324 . T . PASS END=196522328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 196522329 . T . PASS END=196522329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:4,0 chr2 196522330 . G . PASS END=196522359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,188:0,18,188:6,0 chr2 196522360 . C . PASS END=196522361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:1:6:0,1,135:0,1,177:3,0 chr2 196522362 . G . PASS END=196522370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:12:8:0,12,180:0,24,255:5,0 chr2 196522371 . A . LowGQ END=196522371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,131:2,0,132:3,0 chr2 196522372 . G . PASS END=196522374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 196522375 . A . LowGQ END=196522375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,124:16,0,140:3,0 chr2 196522376 . C . PASS END=196522393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,149:0,15,149:5,0 chr2 196522394 . C . LowGQ END=196522394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,94:24,0,118:4,0 chr2 196522395 . G . PASS END=196522398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 196522399 . A . LowGQ END=196522399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,2:6:0:6:0,0,100:15,0,115:4,0 chr2 196522400 . G . PASS END=196522403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,188:0,18,188:6,0 chr2 196522404 . G . PASS END=196522404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 196522405 . C . PASS END=196522412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,180:0,18,180:6,0 chr2 196522413 . C . PASS END=196522413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 196522414 . G . PASS END=196522419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 196522420 . G . PASS END=196522420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 196522421 . G . PASS END=196522431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:9,0 chr2 196522432 . A . PASS END=196522433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr2 196522434 . G . PASS END=196522436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 196522437 . C . PASS END=196522437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 196522438 . G . PASS END=196522443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 196522444 . G . PASS END=196522444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:8,0 chr2 196522445 . C . PASS END=196522449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 196522450 . C . PASS END=196522451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,255:0,10,255:8,0 chr2 196522452 . T . PASS END=196522463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,333:0,27,255:9,0 chr2 196522464 . A . PASS END=196522465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 196522466 . G . PASS END=196522475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 196522476 . G . PASS END=196522476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:8,0 chr2 196522477 . G . PASS END=196522501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 196522502 . T . PASS END=196522502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,249:0,10,249:7,0 chr2 196522503 . T . PASS END=196522519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 196522520 . T . PASS END=196522520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr2 196522521 . C . PASS END=196522524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 196522525 . C . PASS END=196522529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 196522530 . C . PASS END=196522535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:9,0 chr2 196522536 . T . PASS END=196522574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:14:5:0,14,186:0,14,186:6,0 chr2 196522575 . G . PASS END=196522592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 196522593 . C . PASS END=196522601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 196522602 . G . PASS END=196522602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 196522603 . C . PASS END=196522603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:5,0 chr2 196522604 . G . PASS END=196522620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,202:6,0 chr2 196544767 . A . PASS END=196545774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:35:0,91,1152:0,91,255:40,2 chr2 196548423 . T . PASS END=196548630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:92:31:0,92,1172:0,92,255:40,1 chr2 196549171 . G . PASS END=196549173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 196549174 . C . PASS END=196549174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr2 196549175 . T . PASS END=196549307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:34:0,81,1274:0,81,255:40,0 chr2 196571340 . C . PASS END=196571509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:40:0,87,1311:0,87,255:40,0 chr2 196573380 . T . PASS END=196573381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1272:0,69,255:35,0 chr2 196573382 . T . PASS END=196573382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1351:0,108,255:36,0 chr2 196573383 . C . PASS END=196573385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:40,0 chr2 196573386 . G . PASS END=196573568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:93:44:0,93,1530:0,93,255:40,0 chr2 196578157 . G . PASS END=196578268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:40:0,96,1440:0,103,255:40,0 chr2 196578269 . C . PASS END=196578274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1135:0,94,255:33,0 chr2 196578275 . C . PASS END=196578277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 196581361 . G . PASS END=196581716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:29:0,81,995:0,82,255:40,0 chr2 196581717 . G . PASS END=196581720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 196581721 . T . PASS END=196581721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:22,0 chr2 196581722 . C . PASS END=196581729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:24,0 chr2 196582976 . G . PASS END=196583056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,126,255:40,0 chr2 196589106 . G . PASS END=196589116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:75:0,120,1800:0,197,255:40,0 chr2 196592883 . G . PASS END=196592883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:24,0 chr2 196592884 . A . PASS END=196592885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,828:0,78,255:26,0 chr2 196592886 . A . PASS END=196592887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 196592888 . T . PASS END=196592888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,826:0,64,255:26,0 chr2 196592889 . T . PASS END=196593050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:29:0,87,1094:0,87,255:40,0 chr2 196593051 . T . PASS END=196593073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:25:0,66,990:0,72,255:25,0 chr2 196599607 . C . PASS END=196599765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:36:0,99,1410:0,101,255:40,0 chr2 196602645 . T . PASS END=196602646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 196602647 . A . PASS END=196602649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1061:0,71,255:26,0 chr2 196602650 . A . PASS END=196602657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 196602658 . T . PASS END=196602828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:30:0,80,1142:0,80,255:40,0 chr2 196602829 . C . PASS END=196602836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,83,255:26,0 chr2 196602837 . G . PASS END=196602843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:48:24:0,48,720:0,72,255:18,0 chr2 196602844 . A . PASS END=196602844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:15,0 chr2 196602845 . G . PASS END=196602848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:20:0,45,675:0,60,255:17,0 chr2 196602849 . C . PASS END=196602851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 196605490 . C . PASS END=196605593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:85:0,120,1800:0,225,255:40,0 chr2 196619061 . C . PASS END=196619238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:37:0,102,1530:0,110,255:40,0 chr2 196620857 . C . PASS END=196620863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1336:0,98,255:38,0 chr2 196620864 . A . PASS END=196620864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1232:0,78,255:37,0 chr2 196620865 . A . PASS END=196621009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:37:0,87,1395:0,87,255:40,0 chr2 196636384 . C . PASS END=196636610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:84:36:0,84,1260:0,96,255:40,0 chr2 196636611 . G . PASS END=196636614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,77,255:25,0 chr2 196640570 . C . PASS END=196640707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:83:41:0,83,1512:0,83,255:40,0 chr2 196642524 . A . PASS END=196642529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:29,0 chr2 196642530 . A . PASS END=196642530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 196642531 . G . PASS END=196642532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 196642533 . A . PASS END=196642534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 196642535 . G . PASS END=196642550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:30:0,83,1066:0,83,255:35,0 chr2 196642551 . G . PASS END=196642551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:34,0 chr2 196642552 . C . PASS END=196642690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:31:0,84,1260:0,93,255:40,0 chr2 196642691 . G . PASS END=196642705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,990:0,72,255:26,0 chr2 196642706 . G . PASS END=196642709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr2 196651734 . C . PASS END=196651739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 196651740 . C . PASS END=196651749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,980:0,81,255:32,0 chr2 196651750 . A . PASS END=196651750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:31,0 chr2 196651751 . A . PASS END=196651751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 196651752 . C . PASS END=196651752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1062:0,41,255:29,0 chr2 196651753 . A . PASS END=196651895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:83:33:0,83,1172:0,83,255:40,0 chr2 196659062 . A . PASS END=196659075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1135:0,93,255:35,0 chr2 196659076 . T . PASS END=196659076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 196659077 . G . PASS END=196659087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1228:0,92,255:35,0 chr2 196659088 . C . PASS END=196659088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:30,0 chr2 196659089 . C . PASS END=196659098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:36:0,90,1310:0,92,255:36,0 chr2 196659099 . A . PASS END=196659099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:35,0 chr2 196659100 . T . PASS END=196659248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:35:0,84,1260:0,88,255:40,0 chr2 196659249 . T . PASS END=196659262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:26:0,60,900:0,74,255:25,0 chr2 196661300 . C . PASS END=196661461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:43:0,81,1215:0,113,255:40,0 chr2 196664020 . C . PASS END=196664034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1131:0,80,255:34,0 chr2 196664035 . T . PASS END=196664195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:35:0,90,1295:0,92,255:40,0 chr2 196664196 . C . PASS END=196664196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:30,0 chr2 196671464 . C . PASS END=196671556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:99:53:0,111,1665:0,156,255:40,0 chr2 196673406 . C . PASS END=196673495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:91:36:0,91,1246:0,91,255:40,0 chr2 196673496 . T . PASS END=196673532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:62:0,120,1800:0,176,255:40,0 chr2 196673533 . A G, 238.68 PASS DP=64;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,64,0:1.000,0.000:64:0,34,0:0,30,0:189:276,192,0,376,376,376:255,192,0:0,0:2.3868e+02,1.8868e+02,0.0000e+00,3.7345e+02,4.0822e+02,3.7646e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,39,25:0,0,31,33 chr2 196673534 . G . PASS END=196673570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,108,1620:0,120,255:40,0 chr2 196673571 . T . PASS END=196673599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,974:0,90,255:36,0 chr2 196673600 . T . PASS END=196673600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 196674469 . C . PASS END=196674595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,102,1530:0,116,255:40,0 chr2 196681352 . C . PASS END=196681687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:34:0,86,1202:0,86,255:40,0 chr2 196682420 . C . PASS END=196682535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1242:0,96,255:40,0 chr2 196682536 . G . PASS END=196682536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:21,0 chr2 196682537 . A . PASS END=196682543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:22,0 chr2 196682544 . A . PASS END=196682547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 196682548 . T . PASS END=196682548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 196682549 . G . PASS END=196682553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,59,255:19,0 chr2 196688979 . C . PASS END=196689169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:34:0,90,1258:0,98,255:40,0 chr2 196698930 . C . PASS END=196699084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:43:0,120,1800:0,128,255:40,0 chr2 196709132 . A . PASS END=196709172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,118,1800:0,118,255:40,0 chr2 196709726 . A . PASS END=196709732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr2 196709733 . T . PASS END=196709733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 196709734 . T . PASS END=196709735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 196709736 . T . PASS END=196709748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 196709749 . G . PASS END=196709749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 196709750 . G . PASS END=196709750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,2 chr2 196709751 . A . PASS END=196709751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:24:31:0,24,978:0,24,255:28,2 chr2 196709752 . A . PASS END=196709752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr2 196709753 . A . PASS END=196709888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,87,255:40,0 chr2 196709889 . T . PASS END=196709889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 196718067 . C . PASS END=196718068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 196718069 . G . PASS END=196718080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr2 196718081 . A . PASS END=196718081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 196718082 . T . PASS END=196718104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:26,0 chr2 196718105 . C . PASS END=196718106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 196718107 . A . PASS END=196718107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 196718108 . C . PASS END=196718139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1047:0,84,255:32,0 chr2 196718140 . T . PASS END=196718140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr2 196718141 . T . PASS END=196718185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1208:0,83,255:34,0 chr2 196718186 . T . PASS END=196718186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:29,0 chr2 196718187 . T . PASS END=196718192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1119:0,82,255:31,0 chr2 196718193 . A . PASS END=196718205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,900:0,81,255:24,0 chr2 196718206 . C . PASS END=196718238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,637:0,43,255:19,0 chr2 196718239 . C . PASS END=196718239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 196718240 . T . PASS END=196718252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,659:0,51,255:17,0 chr2 196720535 . C . PASS END=196720549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1190:0,86,255:33,0 chr2 196720550 . A . PASS END=196720550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1017:0,66,255:31,0 chr2 196720551 . G . PASS END=196720568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1164:0,85,255:36,0 chr2 196720569 . A . PASS END=196720569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:34,0 chr2 196720570 . A . PASS END=196720708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:35:0,87,1250:0,87,255:40,0 chr2 196720709 . T . PASS END=196720709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:30,0 chr2 196720710 . G . PASS END=196720715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:31,0 chr2 196722101 . T . PASS END=196722269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:33:0,84,1225:0,84,255:40,0 chr2 196722270 . G . PASS END=196722270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1310:0,78,255:32,0 chr2 196722271 . A . PASS END=196722274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1335:0,95,255:34,0 chr2 196722275 . C . PASS END=196722275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr2 196722276 . T . PASS END=196722353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1131:0,80,255:37,0 chr2 196722354 . T . PASS END=196722354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1231:0,78,255:33,0 chr2 196722355 . G . PASS END=196722435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1180:0,90,255:38,0 chr2 196722436 . C . PASS END=196722447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr2 196723198 . C . PASS END=196723204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,815:0,69,255:26,0 chr2 196723205 . G . PASS END=196723351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,865:0,81,255:40,0 chr2 196723352 . G . PASS END=196723352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1549:0,77,255:40,0 chr2 196723353 . C . PASS END=196723381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,105,1575:0,113,255:40,0 chr2 196723382 . A . PASS END=196723382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:77:47:0,77,1387:0,77,255:40,0 chr2 196723383 . T . PASS END=196723384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:46:0,104,1455:0,104,255:40,0 chr2 196723385 . A . PASS END=196723385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,4:46:72:46:0,72,1492:0,72,255:40,0 chr2 196723386 . T . PASS END=196723497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,106,1428:0,106,255:40,0 chr2 196723498 . T . PASS END=196723498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:71:45:0,71,1443:0,71,255:34,0 chr2 196723499 . T . PASS END=196723528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:38:0,81,1331:0,81,255:39,0 chr2 196726441 . C . PASS END=196726670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:37:0,90,1350:0,99,255:40,0 chr2 196728873 . C . PASS END=196728896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,853:0,69,255:26,0 chr2 196728897 . G . PASS END=196728905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:27,0 chr2 196728906 . A . PASS END=196728906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 196728907 . G . PASS END=196728909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 196728910 . G . PASS END=196728910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 196728911 . G . PASS END=196729733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:28:0,81,1063:0,84,255:40,0 chr2 196729734 . C . PASS END=196729742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:22,0 chr2 196729743 . G . PASS END=196729745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:24:0,45,675:0,72,255:15,0 chr2 196736974 . C . PASS END=196737193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:31:0,82,1148:0,82,255:40,0 chr2 196738292 . C . PASS END=196738418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:51:0,120,1800:0,137,255:40,1 chr2 196740399 . C . PASS END=196740406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:18,0 chr2 196740407 . C . PASS END=196740410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 196740411 . T . PASS END=196740411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 196740412 . A . PASS END=196740415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,764:0,66,255:22,0 chr2 196740416 . C . PASS END=196740416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 196740417 . A . PASS END=196740421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 196740422 . A . PASS END=196740422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 196740423 . T . PASS END=196740436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,885:0,75,255:25,0 chr2 196740437 . A . PASS END=196740437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:26,0 chr2 196740438 . G . PASS END=196740443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,955:0,78,255:26,0 chr2 196740444 . T . PASS END=196740464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:30,0 chr2 196740465 . C . PASS END=196740465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 196740466 . A . PASS END=196740479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:33,0 chr2 196740480 . G . PASS END=196740480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:32,0 chr2 196740481 . G . PASS END=196740539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1092:0,85,255:37,0 chr2 196740540 . G . PASS END=196740552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:65:26:0,65,976:0,65,255:26,0 chr2 196740553 . A . PASS END=196740553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:22,0 chr2 196740554 . T . PASS END=196740560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 196740561 . A . PASS END=196740561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:22,0 chr2 196740562 . G . PASS END=196740562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 196740563 . A . PASS END=196740563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 196740564 . C . PASS END=196740567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 196741268 . C . PASS END=196741423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:53:0,120,1800:0,142,255:40,2 chr2 196746519 . C . PASS END=196746716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:43:0,120,1340:0,120,255:40,1 chr2 196749309 . C . PASS END=196749533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:41:0,84,1260:0,102,255:40,0 chr2 196750865 . C . PASS END=196750996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:90:36:0,90,1350:0,105,255:40,0 chr2 196752982 . C . PASS END=196753128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:93:39:0,93,1395:0,117,255:40,0 chr2 196753129 . C . PASS END=196753158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,925:0,65,255:26,0 chr2 196753523 . A . PASS END=196753705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,102,1533:0,102,255:40,0 chr2 196756379 . C . PASS END=196756395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,823:0,66,255:25,0 chr2 196756396 . C . PASS END=196756396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr2 196756397 . T . PASS END=196756397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 196756398 . C . PASS END=196756423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1055:0,80,255:40,0 chr2 196756424 . A . PASS END=196756424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1504:0,74,255:39,0 chr2 196756425 . G . PASS END=196756490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:37:0,84,1260:0,99,255:40,0 chr2 196756491 . A . PASS END=196756494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:28,0 chr2 196756495 . C . PASS END=196756504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,88,255:25,0 chr2 196756505 . A . PASS END=196756510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:45:35:0,45,675:0,88,255:19,0 chr2 196756511 . G . PASS END=196756514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:30:35:0,30,450:0,105,255:11,0 chr2 196756515 . T . PASS END=196756517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:24:36:0,24,360:0,77,255:8,0 chr2 196756518 . T . PASS END=196756528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:15:33:0,15,225:0,33,255:6,0 chr2 196759700 . C . PASS END=196759941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:82:30:0,82,1103:0,82,255:40,0 chr2 196759942 . T . PASS END=196759948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1170:0,69,255:26,0 chr2 196762391 . C . PASS END=196762440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,1:101:99:88:0,120,1800:0,146,255:40,1 chr2 196762441 . T . PASS END=196762489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,8:95:99:85:0,113,1800:0,113,255:40,1 chr2 196765006 . C . PASS END=196765218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:37:0,93,1395:0,98,255:40,0 chr2 196771383 . C . PASS END=196771510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:43:0,116,1635:0,116,255:40,0 chr2 196771631 . C . PASS END=196771733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:40:0,108,1620:0,120,255:40,0 chr2 196774751 . C . PASS END=196774758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 196774759 . A . PASS END=196774759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:29,0 chr2 196774760 . T . PASS END=196774768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:33,0 chr2 196774769 . A . PASS END=196774769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1140:0,60,255:32,0 chr2 196774770 . G . PASS END=196774919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1215:0,87,255:40,0 chr2 196786812 . C . PASS END=196786921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:91:32:0,91,1210:0,91,255:40,0 chr2 196788319 . T . PASS END=196788493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1189:0,81,255:40,2 chr2 196788494 . A . PASS END=196788494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1199:0,78,255:34,0 chr2 196788495 . T . PASS END=196788514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1215:0,92,255:35,0 chr2 196788515 . A . PASS END=196788528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,990:0,65,255:26,0 chr2 196788529 . A . PASS END=196788529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr2 196788530 . G . PASS END=196788531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:22,0 chr2 196791150 . C . PASS END=196791238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,134,255:40,0 chr2 196791239 . C . PASS END=196791275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,165,255:40,0 chr2 196791276 . T G, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.528;ReadPosRankSum=3.820;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,30,0:0.517,0.000:58:10,13,0:18,17,0:48:85,0,50,1065,991,2056:255,0,255:25,0:5.0000e+01,6.5751e-05,5.2901e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,14,12,18:16,12,13,17 chr2 196791277 . G . PASS END=196791290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,171,255:40,0 chr2 196799315 . C . PASS END=196799321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:32,0 chr2 196799322 . A . PASS END=196799322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:30,0 chr2 196799323 . T . PASS END=196799503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:32:0,87,1174:0,91,255:40,0 chr2 196799504 . A . PASS END=196799513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:60:31:0,60,900:0,93,255:25,0 chr2 196801323 . C . PASS END=196801405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:90:39:0,90,1433:0,90,255:40,0 chr2 196801406 . C . PASS END=196801406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,12:82:45:82:0,45,1846:0,45,255:40,0 chr2 196801407 . T . PASS END=196801410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:80:0,120,1800:0,223,255:40,0 chr2 196801411 . C . PASS END=196801411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,11:82:39:82:0,39,1885:0,39,255:40,0 chr2 196801412 . C . PASS END=196801415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,2:82:99:82:0,120,1800:0,213,255:40,0 chr2 196801416 . T . LowGQ END=196801416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,16:83:0:83:0,0,1846:62,0,255:40,0 chr2 196801417 . A . PASS END=196801419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,5:83:99:83:0,120,1800:0,165,255:40,0 chr2 196801420 . C . PASS END=196801420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,12:83:12:83:0,12,1945:0,12,255:40,1 chr2 196801421 . A . PASS END=196801457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,8:83:93:76:0,93,1800:0,93,255:40,0 chr2 196801458 . G . PASS END=196801458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,9:76:56:76:0,56,2148:0,56,255:40,0 chr2 196801459 . A . PASS END=196801498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,2:73:84:55:0,84,1620:0,84,255:40,0 chr2 196801499 . T . PASS END=196801499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1358:0,60,255:36,0 chr2 196801500 . G . PASS END=196801504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:90:41:0,90,1426:0,90,255:37,0 chr2 196801505 . A . PASS END=196801505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1418:0,68,255:33,0 chr2 196801506 . A . PASS END=196801508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1305:0,117,255:29,0 chr2 196801509 . T . PASS END=196801509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1258:0,59,255:28,0 chr2 196801510 . G . PASS END=196801516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:34:0,87,1305:0,88,255:30,0 chr2 196821985 . C . PASS END=196822003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,756:0,63,255:26,0 chr2 196822004 . A . PASS END=196822004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 196822005 . T . PASS END=196822005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr2 196822006 . A . PASS END=196822006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,990:0,57,255:28,0 chr2 196822007 . T . PASS END=196822008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1036:0,90,255:30,0 chr2 196822009 . T . PASS END=196822009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 196822010 . C . PASS END=196822160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,96,255:40,0 chr2 196822161 . C . PASS END=196822165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr2 196822166 . C . PASS END=196822166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 196822167 . A . PASS END=196822171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,96,255:24,0 chr2 196824984 . C . PASS END=196825669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:40:0,106,1378:0,106,255:40,0 chr2 196834672 . C . PASS END=196834818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:87:44:0,87,1305:0,110,255:40,0 chr2 196836966 . C . PASS END=196837190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:89:40:0,89,1285:0,89,255:40,0 chr2 196849356 . C . PASS END=196849415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,140,255:40,0 chr2 196849416 . C . PASS END=196849434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,165,255:40,0 chr2 196851790 . C . PASS END=196851873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,129,255:40,0 chr2 196851874 . A . PASS END=196851910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,99,1485:0,115,255:40,0 chr2 196851911 . G A, 50.00 PASS DP=43;MQ=250.00;MQRankSum=5.588;ReadPosRankSum=1.424;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,23,0:0.535,0.000:43:11,12,0:9,11,0:47:85,0,47,185,185,185:255,0,255:17,0:5.0000e+01,9.0343e-05,4.9669e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:9,11,11,12:10,10,12,11 chr2 196851912 . A . PASS END=196851916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:93:46:0,93,1395:0,122,255:33,0 chr2 196851917 . T . PASS END=196851917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1302:0,48,255:29,0 chr2 196852681 . C . PASS END=196852681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 196852682 . T . PASS END=196852682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,939:0,57,255:26,0 chr2 196852683 . T . PASS END=196852870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:29:0,84,1260:0,87,255:40,0 chr2 196852871 . A . PASS END=196852871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:31,0 chr2 196852872 . C . PASS END=196852910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1180:0,93,255:32,0 chr2 196852911 . T . PASS END=196852911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 196852912 . C . PASS END=196852921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 196852922 . G . PASS END=196852922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 196852923 . G . PASS END=196852932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 196852933 . T . PASS END=196852933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 196852934 . G . PASS END=196852934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 196852935 . T . PASS END=196852946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,930:0,72,255:24,0 chr2 196852947 . T . PASS END=196852953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 196863814 . T . PASS END=196863966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:45:0,114,1582:0,118,255:40,0 chr2 196865428 . C . PASS END=196865607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,117,1796:0,117,255:40,0 chr2 196866399 . T . PASS END=196866419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:33:0,96,1249:0,99,255:38,0 chr2 196866420 . C T, 160.91 PASS DP=38;MQ=249.33;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,21,0:0,17,0:111:199,114,0,1424,114,1424:255,114,0:0,0:1.6091e+02,1.1091e+02,0.0000e+00,4.5000e+02,1.4568e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,15:0,0,20,18 chr2 196866421 . G . PASS END=196866457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:40:0,117,1476:0,120,255:40,0 chr2 196866458 . G . PASS END=196866534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:43:0,90,1396:0,90,255:40,2 chr2 196866535 . T . PASS END=196866536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:63:43:0,63,1502:0,63,255:39,2 chr2 196866537 . T . PASS END=196866569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1260:0,97,255:36,0 chr2 196866570 . T . PASS END=196866582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1078:0,74,255:27,0 chr2 196877511 . A . PASS END=196877515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 196877516 . A . PASS END=196877516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1125:0,69,255:31,0 chr2 196877517 . A . PASS END=196877630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:88:32:0,88,1186:0,88,255:40,0 chr2 196883894 . T . PASS END=196883894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1129:0,71,255:33,0 chr2 196883895 . T . PASS END=196884019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:88:34:0,88,1211:0,88,255:40,0 chr2 196889153 . T . PASS END=196889228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,178,255:40,0 chr2 196891484 . C . PASS END=196891486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:30,0 chr2 196891487 . T . PASS END=196891664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:30:0,81,1111:0,85,255:40,0 chr2 196892684 . C . PASS END=196892745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,3:52:84:49:0,84,1707:0,84,255:40,0 chr2 196892746 . C . PASS END=196892746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1729:0,78,255:40,0 chr2 196892747 . T . PASS END=196892771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:39:0,90,1328:0,90,255:40,0 chr2 196912076 . A . PASS END=196912104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:66:0,120,1800:0,165,255:40,0 chr2 196912105 . G . PASS END=196912193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,174,255:40,0 chr2 196912194 . C . PASS END=196912223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:96:49:0,96,1440:0,147,255:40,0 chr2 196913020 . C . PASS END=196913128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:35:0,93,1258:0,94,255:40,0 chr2 196915911 . C . PASS END=196915953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,129,255:40,0 chr2 196915954 . T . PASS END=196915973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,164,255:40,0 chr2 196922778 . C . PASS END=196922840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:57:0,120,1800:0,171,255:40,0 chr2 196933421 . C . PASS END=196933423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1180:0,83,255:31,0 chr2 196933424 . C . PASS END=196933424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:28,0 chr2 196933425 . T . PASS END=196933426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 196933427 . A . PASS END=196933427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 196933428 . C . PASS END=196933435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1224:0,83,255:30,0 chr2 197002171 . C . PASS END=197002184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:25,0 chr2 197002185 . C . PASS END=197002185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 197002186 . T . PASS END=197002189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 197002190 . A . PASS END=197002190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 197002191 . C . PASS END=197002192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 197002193 . A . PASS END=197002193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,787:0,58,255:22,0 chr2 197002194 . G . PASS END=197002194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 197002195 . T . PASS END=197002195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,823:0,48,255:24,0 chr2 197002196 . T . PASS END=197002202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,895:0,68,255:27,0 chr2 197002203 . G . PASS END=197002263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1041:0,84,255:36,0 chr2 197002264 . A . PASS END=197002264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1142:0,64,255:33,0 chr2 197002265 . T . PASS END=197002269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 197002270 . T . PASS END=197002270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1107:0,60,255:32,0 chr2 197002271 . T . PASS END=197002320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:36:0,97,1335:0,97,255:40,0 chr2 197002321 . G . PASS END=197002321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:35,0 chr2 197002322 . T . PASS END=197002426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1215:0,102,255:40,0 chr2 197002427 . A . PASS END=197002428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr2 197002429 . G . PASS END=197002431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:27,0 chr2 197002432 . T . PASS END=197002432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1089:0,58,255:23,0 chr2 197002433 . A . PASS END=197002453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr2 197004344 . T . PASS END=197004401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:38:0,81,1294:0,81,255:40,0 chr2 197004402 . A . PASS END=197004438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,167,255:40,0 chr2 197004439 . A G, 49.67 PASS DP=62;MQ=250.00;MQRankSum=6.744;ReadPosRankSum=4.599;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,29,0:0.468,0.000:62:12,19,0:21,10,0:48:84,0,50,1021,1151,2172:255,0,255:30,0:4.9670e+01,6.8598e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,19,13,16:13,20,15,14 chr2 197004440 . A . PASS END=197004476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,131,255:40,0 chr2 197004477 . A . PASS END=197004523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:87:31:0,87,1305:0,93,255:40,0 chr2 197005973 . C . PASS END=197006021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,120,1800:0,147,255:40,0 chr2 197008284 . C . PASS END=197008392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:31:0,84,1257:0,89,255:40,0 chr2 197008393 . C . PASS END=197008409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,955:0,78,255:26,0 chr2 197008410 . G . PASS END=197008410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 197010635 . C . PASS END=197010773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:92:33:0,92,1271:0,92,255:40,0 chr2 197010774 . G . PASS END=197010774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:36,0 chr2 197010775 . C . PASS END=197010779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,105,1575:0,117,255:35,0 chr2 197021162 . C . PASS END=197021178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1117:0,80,255:33,0 chr2 197021179 . T . PASS END=197021179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:31,0 chr2 197021180 . G . PASS END=197021189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1196:0,85,255:35,0 chr2 197021190 . G . PASS END=197021190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:34,0 chr2 197021191 . T . PASS END=197021238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:94:35:0,94,1263:0,94,255:40,0 chr2 197021239 . C . PASS END=197021275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,101,1720:0,101,255:40,0 chr2 197021276 . T C, 42.19 PASS DP=46;MQ=249.12;MQRankSum=4.832;ReadPosRankSum=-0.173;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,16,0:0.348,0.000:46:20,11,0:10,5,0:42:77,0,50,560,999,1559:255,0,255:28,0:4.2190e+01,2.8398e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,13,8,8:17,13,11,5 chr2 197021277 . C . PASS END=197021313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,108,1476:0,108,255:40,0 chr2 197021314 . T . PASS END=197021334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:37:0,94,1288:0,94,255:40,0 chr2 197021335 . T . PASS END=197021344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1308:0,92,255:36,0 chr2 197021345 . T . PASS END=197021345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:29,0 chr2 197021346 . A . PASS END=197021349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 197021350 . A . PASS END=197021360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,75,255:24,0 chr2 197021361 . A . PASS END=197021361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 197021362 . C . PASS END=197021364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 197021365 . C . PASS END=197021365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 197021366 . A . PASS END=197021367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 197021368 . A . PASS END=197021368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 197021369 . T . PASS END=197021371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 197021372 . T A, 46.40 PASS DP=22;MQ=250.00;MQRankSum=3.788;ReadPosRankSum=1.194;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,8,0:0.364,0.000:22:6,4,0:8,4,0:46:81,0,50,279,501,787:202,0,255:15,0:4.6396e+01,1.2141e-04,5.3000e+01,2.7916e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,9,3,5:7,7,3,5 chr2 197021373 . C . PASS END=197021374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 197021375 . T . PASS END=197021375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 197027986 . C . PASS END=197028107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:49:0,120,1800:0,131,255:40,0 chr2 197066001 . T . PASS END=197066001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 197066002 . C . PASS END=197066112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:55:0,120,1800:0,148,255:40,1 chr2 197080589 . C . PASS END=197080691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:84:38:0,84,1305:0,84,255:40,0 chr2 197080692 . C . PASS END=197080692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1302:0,59,255:29,0 chr2 197080693 . T . PASS END=197080693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1257:0,78,255:27,0 chr2 197080694 . G . PASS END=197080700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,91,255:29,0 chr2 197080701 . A . PASS END=197080701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:22:34:0,22,984:0,22,255:24,0 chr2 197081732 . C . PASS END=197081817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:64:0,120,1800:0,182,255:40,0 chr2 197084763 . C . PASS END=197084789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:88:35:0,88,1166:0,88,255:40,0 chr2 197084790 . A . PASS END=197084790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:74:54:0,74,1767:0,74,255:40,0 chr2 197084791 . A . PASS END=197084877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,115,1800:0,115,255:40,0 chr2 197085519 . C . PASS END=197085665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,107,1466:0,107,255:40,0 chr2 197086935 . C . PASS END=197087064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:35:0,84,1251:0,89,255:40,0 chr2 197090496 . A . PASS END=197090594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:48:0,120,1800:0,140,255:40,0 chr2 197092826 . C . PASS END=197092828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,909:0,67,255:26,0 chr2 197092829 . T . PASS END=197092830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 197092831 . A . PASS END=197092831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:25,0 chr2 197092832 . T . PASS END=197092835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:31,0 chr2 197092836 . G . PASS END=197092836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr2 197092837 . A . PASS END=197092852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1157:0,80,255:32,0 chr2 197092853 . G . PASS END=197092853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:31,0 chr2 197092854 . A . PASS END=197092978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:30:0,81,1215:0,90,255:40,0 chr2 197105173 . C . PASS END=197105286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:62:0,120,1800:0,163,255:40,0 chr2 197106808 . T . PASS END=197106811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1011:0,84,255:29,0 chr2 197106812 . A . PASS END=197106812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 197106813 . C . PASS END=197106884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1103:0,80,255:32,0 chr2 197106885 . C . PASS END=197106886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:29,0 chr2 197106887 . G . PASS END=197106887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 197106888 . C . PASS END=197106905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:23:0,60,900:0,61,255:27,0 chr2 197106906 . C . PASS END=197106917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,675:0,47,255:19,0 chr2 197106918 . A . PASS END=197106919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:33:19:0,33,495:0,57,255:11,0 chr2 197106920 . G . PASS END=197106928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:16:0,24,360:0,48,255:9,0 chr2 197118644 . C . PASS END=197118691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:35:0,98,1244:0,98,255:40,0 chr2 197118692 . A . PASS END=197118728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:38:0,96,1440:0,114,255:40,0 chr2 197118729 . C T, 160.91 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,22,0:0,16,0:111:199,114,0,1444,114,1444:255,114,0:0,0:1.6091e+02,1.1091e+02,0.0000e+00,4.5000e+02,1.4568e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,22:0,0,18,20 chr2 197118730 . G . PASS END=197118739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,101,255:30,0 chr2 197118740 . C . PASS END=197118741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:30:0,68,1062:0,68,255:27,0 chr2 197118742 . T . PASS END=197118753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1017:0,87,255:29,0 chr2 197122547 . C . PASS END=197122594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1119:0,89,255:35,0 chr2 197122595 . G . PASS END=197122595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr2 197122596 . G . PASS END=197122597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 197122598 . G . PASS END=197122615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:26:0,63,878:0,64,255:26,0 chr2 197122616 . A . PASS END=197122616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:22,0 chr2 197122617 . A . PASS END=197122618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 197122619 . T . PASS END=197122619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:21,0 chr2 197122620 . G . PASS END=197122630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 197135917 . C . PASS END=197136013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,120,255:40,0 chr2 197138745 . C . PASS END=197138847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,133,255:40,0 chr2 197143252 . C . PASS END=197143252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:40,0 chr2 197143253 . T . PASS END=197143253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:56:42:0,56,1384:0,56,255:40,0 chr2 197143254 . C . PASS END=197143386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:46:0,100,1668:0,100,255:40,0 chr2 197157289 . C . PASS END=197157289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 197157290 . T . PASS END=197157290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr2 197157291 . T . PASS END=197157329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1066:0,90,255:31,0 chr2 197157330 . G . PASS END=197157330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr2 197157331 . C . PASS END=197157437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:31:0,86,1130:0,86,255:39,0 chr2 197157438 . T . PASS END=197157438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1069:0,38,255:29,0 chr2 197157439 . C . PASS END=197157448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1135:0,93,255:31,0 chr2 197157449 . T . PASS END=197157453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:70:29:0,70,905:0,70,255:25,0 chr2 197157454 . T . PASS END=197157454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:24,0 chr2 197157455 . G . PASS END=197157460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:25:0,72,1080:0,75,255:25,0 chr2 197157461 . A . PASS END=197157462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 197157463 . G . PASS END=197157472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 197157473 . C . PASS END=197157474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 197171212 . A . PASS END=197171212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 197171213 . G . PASS END=197171336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:46:0,111,1742:0,111,255:40,0 chr2 197171854 . C . PASS END=197171957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:92:36:0,92,1300:0,92,255:40,0 chr2 197172659 . C . PASS END=197172659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 197172660 . G . PASS END=197172662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 197172663 . G . PASS END=197172665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 197172666 . T . PASS END=197172670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 197172671 . T . PASS END=197172671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 197172672 . G . PASS END=197172672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 197172673 . C . PASS END=197172673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 197172674 . T . PASS END=197172675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 197172676 . C . PASS END=197172677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 197172678 . T . PASS END=197172678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,421:0,28,255:13,0 chr2 197172679 . T . PASS END=197172696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,482:0,41,255:19,0 chr2 197172697 . T . PASS END=197172697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:19,0 chr2 197172698 . C . PASS END=197172714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 197172715 . G . PASS END=197172715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:23,0 chr2 197172716 . G . PASS END=197172738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr2 197172739 . C . PASS END=197172739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 197172740 . C . PASS END=197172750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:23,0 chr2 197172751 . T . PASS END=197172751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr2 197172752 . C . PASS END=197172755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 197172756 . T . PASS END=197172756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 197172757 . T . PASS END=197172772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,848:0,72,255:24,0 chr2 197172773 . A . PASS END=197172773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr2 197172774 . A . PASS END=197172778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr2 197172779 . C . PASS END=197172785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 197172786 . G . PASS END=197172786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 197172787 . G . PASS END=197172790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 197172791 . T . PASS END=197172791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 197172792 . C . PASS END=197172795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 197172796 . G . PASS END=197172796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 197172797 . C . PASS END=197172799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 197172800 . G . PASS END=197172809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:21:0,49,731:0,49,255:19,0 chr2 197181998 . T . PASS END=197182080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1096:0,82,255:40,0 chr2 197182081 . T . PASS END=197182081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 197182082 . T . PASS END=197182082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 197182083 . G . PASS END=197182083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:28,0 chr2 197182084 . G . PASS END=197182090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 197182091 . A . PASS END=197182091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,920:0,76,255:29,0 chr2 197182092 . A . PASS END=197182093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1074:0,93,255:31,0 chr2 197183276 . C . PASS END=197183279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 197183280 . A . PASS END=197183280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 197183281 . G . PASS END=197183295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 197183296 . T . PASS END=197183296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:21,0 chr2 197183297 . G . PASS END=197183310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:24,0 chr2 197183311 . T . PASS END=197183311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 197183312 . C . PASS END=197183314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 197183315 . A . PASS END=197183315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 197183316 . G . PASS END=197183318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 197183319 . G . PASS END=197183319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 197183320 . C . PASS END=197183329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:24,0 chr2 197183330 . C . PASS END=197183336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 197183337 . A . PASS END=197183339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:65:27:0,65,969:0,65,255:25,0 chr2 197183340 . G . PASS END=197183343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 197183344 . T . PASS END=197183344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr2 197183345 . C . PASS END=197183358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1049:0,87,255:29,0 chr2 197183359 . C . PASS END=197183360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 197183361 . C . PASS END=197183369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 197183370 . A . PASS END=197183408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 197183409 . C . PASS END=197183409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr2 197183410 . T . PASS END=197183427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 197183428 . T . PASS END=197183428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:20,0 chr2 197183429 . C . PASS END=197183443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:22,0 chr2 197183444 . A . PASS END=197183444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 197183445 . T . PASS END=197183474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,870:0,75,255:26,0 chr2 197183475 . G . PASS END=197183475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:20,0 chr2 197183476 . G . PASS END=197183476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 197183477 . G . PASS END=197183525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,582:0,48,255:18,0 chr2 197183526 . C . PASS END=197183536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 197183537 . G . PASS END=197183537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 197183538 . G . PASS END=197183540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 197183541 . A . PASS END=197183541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr2 197183542 . C . PASS END=197183542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 197183543 . T . PASS END=197183554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,798:0,50,255:19,0 chr2 197183555 . C . PASS END=197183571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 197183572 . T . PASS END=197183572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr2 197183573 . C . PASS END=197183617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr2 197183618 . C . PASS END=197183644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,637:0,54,255:19,0 chr2 197183645 . C . PASS END=197183662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 197183663 . T . PASS END=197183664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 197183665 . G . PASS END=197183696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,853:0,63,255:22,0 chr2 197183697 . T . PASS END=197183730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,660:0,53,255:18,0 chr2 197183731 . G . PASS END=197183731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr2 197183732 . C . PASS END=197183762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,653:0,41,255:18,0 chr2 197183763 . A . PASS END=197183763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 197183764 . C . PASS END=197183779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 197183780 . A . PASS END=197183782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 197183783 . A . PASS END=197183806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr2 197183807 . G . PASS END=197183818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,677:0,60,255:20,0 chr2 197183819 . C . PASS END=197183846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:43:18:0,43,660:0,43,255:19,0 chr2 197183847 . T . PASS END=197183847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 197183848 . C . PASS END=197183899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,582:0,40,255:19,0 chr2 197183900 . C . PASS END=197183902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 197183903 . G . PASS END=197183914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,729:0,57,255:19,0 chr2 197183915 . G . PASS END=197183917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 197183918 . C . PASS END=197183918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 197183919 . A . PASS END=197183923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:22,0 chr2 197183924 . T . PASS END=197183924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 197183925 . G . PASS END=197183926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 197183927 . C . PASS END=197183929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 197183930 . G . PASS END=197183931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 197183932 . T . PASS END=197183934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,812:0,53,255:19,0 chr2 197183935 . G . PASS END=197183998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,861:0,66,255:25,0 chr2 197183999 . T . PASS END=197183999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 197184000 . C . PASS END=197184021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,893:0,72,255:25,0 chr2 197184022 . T . PASS END=197184022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 197184023 . C . PASS END=197184052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 197184053 . G . PASS END=197184054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 197184055 . G . PASS END=197184060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 197184061 . G . PASS END=197184064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 197184065 . C . PASS END=197184075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 197184076 . A . PASS END=197184078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 197184079 . G . PASS END=197184098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 197184099 . C . PASS END=197184103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:28,0 chr2 197184104 . A . PASS END=197184104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 197184105 . T . PASS END=197184123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:29,0 chr2 197184124 . G . PASS END=197184124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 197184125 . C . PASS END=197184135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 197184136 . C . PASS END=197184153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:26:0,72,1080:0,78,255:26,0 chr2 197184154 . C . PASS END=197184162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 197184163 . T . PASS END=197184163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 197184164 . C . PASS END=197184169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:28,0 chr2 197184170 . A . PASS END=197184209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,848:0,61,255:26,0 chr2 197184210 . T . PASS END=197184213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 197184214 . T . PASS END=197184214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 197184215 . C . PASS END=197184217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1007:0,81,255:28,0 chr2 197184218 . C . PASS END=197184230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:26,0 chr2 197184231 . A . PASS END=197184232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 197184233 . G . PASS END=197184234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:21,0 chr2 197184235 . A . PASS END=197184237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 197184238 . G . PASS END=197184246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 197184247 . C . PASS END=197184254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 197184255 . A . PASS END=197184283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,976:0,68,255:26,0 chr2 197184284 . A . PASS END=197184288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:45:28:0,45,976:0,45,255:27,0 chr2 197184289 . C . PASS END=197184314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1164:0,83,255:33,0 chr2 197184315 . T . PASS END=197184315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr2 197184316 . G . PASS END=197184320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr2 197184321 . C T, 148.86 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,18,0:0,16,0:99:187,102,0,287,287,287:255,102,0:0,0:1.4886e+02,9.8856e+01,0.0000e+00,2.8363e+02,3.1840e+02,2.8664e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,20,14:0,0,14,20 chr2 197184322 . G . PASS END=197184358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,105,1371:0,107,255:40,0 chr2 197184359 . A . PASS END=197184423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:38:0,90,1380:0,90,255:40,0 chr2 197184424 . T . PASS END=197184424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:36,0 chr2 197184425 . C . PASS END=197184649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:38:0,85,1393:0,85,255:40,0 chr2 197185063 . C . PASS END=197185153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:37:0,97,1327:0,97,255:40,0 chr2 197185154 . C . PASS END=197185154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:34,0 chr2 197185155 . A . PASS END=197185162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1340:0,81,255:36,0 chr2 197185163 . A . PASS END=197185163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1286:0,59,255:33,0 chr2 197187202 . C . PASS END=197187344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:39:0,90,1350:0,101,255:40,0 chr2 197189704 . C . PASS END=197189715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,902:0,75,255:25,0 chr2 197189716 . A . PASS END=197189716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:41:25:0,41,695:0,41,255:22,0 chr2 197189717 . A . PASS END=197189717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 197189718 . T . PASS END=197189718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,715:0,42,255:22,0 chr2 197189719 . T . PASS END=197189719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 197189720 . G . PASS END=197189721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 197189722 . A . PASS END=197189735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,795:0,69,255:25,0 chr2 197189736 . T . PASS END=197189736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:22,0 chr2 197189737 . G . PASS END=197189738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 197189739 . T . PASS END=197189871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:29:0,80,1096:0,80,255:40,0 chr2 197189872 . A . PASS END=197189872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:66:38:0,66,1138:0,66,255:31,0 chr2 197189873 . T . PASS END=197189873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 197194299 . C . PASS END=197194374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,3:63:99:49:0,120,1800:0,125,255:40,0 chr2 197199148 . C . PASS END=197199242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:82:36:0,82,1278:0,82,255:40,0 chr2 197208381 . G . PASS END=197208488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,110,1512:0,110,255:40,0 chr2 197297856 . C . PASS END=197297934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:86:32:0,86,1011:0,86,255:40,0 chr2 197297935 . C . PASS END=197297935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1482:0,74,255:40,0 chr2 197297936 . C . PASS END=197298147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,108,1598:0,108,255:40,0 chr2 197298183 . C . PASS END=197298183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:31,0 chr2 197504491 . A . PASS END=197504502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1141:0,82,255:34,0 chr2 197511065 . G . PASS END=197511066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 197511067 . A . PASS END=197511067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 197511068 . C . PASS END=197511212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:28:0,81,1210:0,84,255:40,0 chr2 197511213 . A . PASS END=197511213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:26,0 chr2 197511214 . T . PASS END=197511214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 197511215 . T . PASS END=197511222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 197511223 . A . PASS END=197511225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 197511226 . A . PASS END=197511228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 197521357 . A . PASS END=197521357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 197521358 . G . PASS END=197521358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 197521359 . G . PASS END=197521360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1105:0,93,255:31,0 chr2 197521361 . T . PASS END=197521361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 197521362 . A . PASS END=197521577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:34:0,102,1226:0,102,255:40,0 chr2 197521682 . C . PASS END=197521697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,862:0,61,255:26,0 chr2 197521698 . A . PASS END=197521702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 197521703 . A . PASS END=197521703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:27,0 chr2 197521704 . T . PASS END=197521712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 197521713 . G . PASS END=197521717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 197521718 . A . PASS END=197521718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 197521719 . G . PASS END=197521749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,970:0,81,255:33,0 chr2 197521750 . G A, 50.00 PASS DP=33;MQ=250.00;MQRankSum=4.881;ReadPosRankSum=2.720;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:16,17,0:0.515,0.000:33:7,8,0:9,9,0:48:85,0,50,592,564,1156:255,0,255:14,0:5.0000e+01,6.5492e-05,5.2933e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,8,13,4:9,7,10,7 chr2 197521751 . A . PASS END=197521760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1050:0,82,255:32,0 chr2 197521761 . T . PASS END=197521761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1021:0,49,255:30,0 chr2 197521762 . T . PASS END=197521787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:33:0,87,1226:0,91,255:33,0 chr2 197521788 . A . PASS END=197521812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:32,0 chr2 197521813 . G . PASS END=197521813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 197521814 . A . PASS END=197521833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 197521834 . A . PASS END=197521850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 197521851 . G . PASS END=197521851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr2 197521852 . C . PASS END=197521860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:26,0 chr2 197523516 . A . PASS END=197523584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:72:0,120,1800:0,131,255:40,0 chr2 197530291 . C . PASS END=197530407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:33:0,84,1150:0,85,255:40,0 chr2 197531443 . G . PASS END=197531448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1097:0,93,255:31,0 chr2 197531449 . A . PASS END=197531450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 197531451 . T . PASS END=197531455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1066:0,93,255:31,0 chr2 197531456 . A . PASS END=197531456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 197531457 . G . PASS END=197531458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr2 197531459 . A . PASS END=197531460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:32:0,66,1103:0,66,255:32,0 chr2 197531461 . A . PASS END=197531461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 197531462 . A . PASS END=197531462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 197531463 . C . PASS END=197531475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,99,1485:0,105,255:40,0 chr2 197531476 . C . PASS END=197531517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,122,255:40,0 chr2 197531518 . C . LowGQ END=197531520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,15:68:0:68:0,0,1398:24,0,255:40,24 chr2 197531521 . A . PASS END=197531561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:56:0,120,1800:0,129,255:40,1 chr2 197531562 . A . PASS END=197531572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1800:0,130,255:40,0 chr2 197534557 . C . PASS END=197534600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,1:113:99:104:0,120,1800:0,255,255:40,0 chr2 197537069 . A . PASS END=197537161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,165,255:40,0 chr2 197538965 . G . PASS END=197539072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:96:46:0,96,1440:0,122,255:40,0 chr2 197540867 . G . PASS END=197540991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,108,1620:0,111,255:40,0 chr2 197541278 . G . PASS END=197541280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1230:0,105,255:35,0 chr2 197541281 . T . PASS END=197541281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:34,0 chr2 197541282 . C . PASS END=197541450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:37:0,93,1395:0,104,255:40,0 chr2 197541451 . G . PASS END=197541453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1125:0,75,255:26,0 chr2 197541454 . A . PASS END=197541454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 197541455 . G . PASS END=197541455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 197541899 . A . PASS END=197541907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:43:0,90,1436:0,90,255:40,0 chr2 197541908 . C . PASS END=197541916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:42:0,93,1496:0,93,255:40,0 chr2 197542017 . G . PASS END=197542085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:81:0,120,1800:0,208,255:40,0 chr2 197559770 . G . PASS END=197559770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 197559771 . T . PASS END=197559883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:28:0,81,1215:0,84,255:40,0 chr2 197565833 . C . PASS END=197565904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:68:0,120,1800:0,176,255:40,0 chr2 197576869 . A . PASS END=197576976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:54:0,120,1800:0,152,255:40,0 chr2 197577401 . G . PASS END=197577463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:37:0,99,1464:0,108,255:40,0 chr2 197578081 . A . PASS END=197578407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:29:0,81,1025:0,86,255:40,0 chr2 197583227 . G . PASS END=197583237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:29,0 chr2 197583238 . T . PASS END=197583238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,956:0,73,255:28,0 chr2 197583239 . C . PASS END=197583341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:29:0,84,1094:0,87,255:40,0 chr2 197583342 . G . PASS END=197583355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:97:38:0,97,1268:0,97,255:38,0 chr2 197584221 . G . PASS END=197584390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:33:0,81,1180:0,83,255:40,0 chr2 197584898 . G . PASS END=197584902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 197585299 . G . PASS END=197585389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:33:0,83,1202:0,83,255:40,0 chr2 197585390 . G . PASS END=197585392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 197586246 . A . PASS END=197586406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1211:0,86,255:40,0 chr2 197586407 . A . PASS END=197586407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:30,0 chr2 197586408 . A . PASS END=197586415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:36:0,87,1305:0,108,255:31,0 chr2 197588333 . G . PASS END=197588336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:80:0,120,1800:0,240,255:40,0 chr2 197590697 . A . PASS END=197590823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:44:0,84,1160:0,84,255:40,0 chr2 197593917 . C . PASS END=197594153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:86:30:0,86,1096:0,86,255:40,0 chr2 197594517 . C . PASS END=197594585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:81:0,120,1800:0,237,255:40,0 chr2 197594681 . T . PASS END=197594822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1215:0,90,255:40,0 chr2 197594823 . A . PASS END=197594823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 197594824 . G . PASS END=197594826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 197594827 . A . PASS END=197594827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:26,0 chr2 197594828 . G . PASS END=197594839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 197594840 . C . PASS END=197594842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:21,0 chr2 197595583 . G . PASS END=197595669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:56:0,120,1800:0,149,255:40,0 chr2 197596757 . A . PASS END=197596873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:38:0,87,1305:0,93,255:40,0 chr2 197596874 . A . PASS END=197596874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:27,0 chr2 197596875 . A . PASS END=197596876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,108,255:27,0 chr2 197597170 . G . PASS END=197597280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:37:0,81,1305:0,81,255:40,0 chr2 197597281 . A . PASS END=197597281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:28,0 chr2 197597282 . A . PASS END=197597286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:30,0 chr2 197629287 . T . PASS END=197629409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:46:0,105,1575:0,113,255:40,0 chr2 197631289 . C . PASS END=197631296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 197631297 . C . PASS END=197631309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr2 197631310 . C . PASS END=197631313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 197631314 . A . PASS END=197631314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 197631315 . G . PASS END=197631327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:26,0 chr2 197631328 . A . PASS END=197631339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 197631340 . A . PASS END=197631340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 197631341 . A . PASS END=197631342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 197631343 . A . PASS END=197631343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr2 197631344 . T . PASS END=197631401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1117:0,82,255:35,0 chr2 197631402 . G . PASS END=197631441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr2 197634639 . C . PASS END=197634763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:39:0,114,1443:0,117,255:40,0 chr2 197636472 . C . PASS END=197636662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:39:0,93,1352:0,103,255:40,0 chr2 197637640 . C . PASS END=197637852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:83:33:0,83,1350:0,83,255:40,0 chr2 197637853 . A . PASS END=197637855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 197637856 . C . PASS END=197637860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:27,0 chr2 197637861 . G . PASS END=197637877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr2 197638800 . T . PASS END=197638864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:39:0,93,1395:0,116,255:40,0 chr2 197639793 . T . PASS END=197639975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:45:0,120,1800:0,129,255:40,0 chr2 197640734 . C . PASS END=197640835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,128,255:40,0 chr2 197641151 . C . PASS END=197641154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 197641155 . T . PASS END=197641155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 197641156 . G . PASS END=197641160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:25,0 chr2 197641161 . G . PASS END=197641161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr2 197641162 . C . PASS END=197641162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 197641163 . A . PASS END=197641320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:28:0,80,1125:0,80,255:40,0 chr2 197641321 . C . PASS END=197641326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:26,0 chr2 197641327 . C . PASS END=197641339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:22:0,42,630:0,66,255:19,0 chr2 197641340 . G . PASS END=197641349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 197641350 . C . PASS END=197641353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 197643579 . T . PASS END=197643791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:45:0,102,1500:0,102,255:40,0 chr2 197645259 . T . PASS END=197645386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:93:32:0,93,1345:0,96,255:40,0 chr2 197649581 . C . PASS END=197649653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:84:65:0,84,1800:0,84,255:40,6 chr2 197650165 . C . PASS END=197650189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,107,1449:0,107,255:40,0 chr2 197650190 . T . PASS END=197650312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:50:0,120,1800:0,136,255:40,0 chr2 197653928 . T . PASS END=197654093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:43:0,108,1535:0,108,255:40,1 chr2 197654603 . C . PASS END=197654603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1476:0,74,255:40,0 chr2 197654604 . T . PASS END=197654629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,99,1526:0,99,255:40,0 chr2 197654630 . T . PASS END=197654794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:32:0,81,1197:0,88,255:40,0 chr2 197656061 . C . PASS END=197656067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1164:0,96,255:33,0 chr2 197656068 . T . PASS END=197656068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:30,0 chr2 197656069 . A . PASS END=197656071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1141:0,82,255:31,0 chr2 197656072 . A . PASS END=197656072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1084:0,52,255:30,0 chr2 197656073 . T . PASS END=197656075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1263:0,86,255:32,0 chr2 197656076 . C . PASS END=197656076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1151:0,63,255:29,0 chr2 197656077 . C . PASS END=197656077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 197656078 . A . PASS END=197656078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1119:0,63,255:29,0 chr2 197656079 . T . PASS END=197656091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:33:0,90,1262:0,99,255:38,0 chr2 197656092 . C . PASS END=197656092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1312:0,62,255:36,0 chr2 197656093 . G . PASS END=197656151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:36:0,87,1281:0,87,255:40,0 chr2 197656152 . A . PASS END=197656152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1153:0,55,255:28,0 chr2 197656153 . G . PASS END=197656160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 197656161 . A . PASS END=197656184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,901:0,62,255:26,0 chr2 197657680 . T . PASS END=197657680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 197657681 . T . PASS END=197657681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,639:0,29,255:19,0 chr2 197657682 . T . PASS END=197657700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,686:0,60,255:21,0 chr2 197657701 . A . PASS END=197657701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:19,0 chr2 197657702 . C . PASS END=197657709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 197657710 . A . PASS END=197657710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,673:0,55,255:21,0 chr2 197657711 . A . PASS END=197657712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 197657713 . C . PASS END=197657713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 197657714 . A . PASS END=197657720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 197657721 . A . PASS END=197657730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:31,0 chr2 197657731 . A . PASS END=197657731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:30,0 chr2 197657732 . T . PASS END=197657745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:34,0 chr2 197657746 . T . PASS END=197657746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1107:0,63,255:32,0 chr2 197657747 . T . PASS END=197657763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1182:0,86,255:34,0 chr2 197657764 . C . PASS END=197657764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1219:0,78,255:29,0 chr2 197657765 . T . PASS END=197657840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:30:0,80,1202:0,80,255:34,0 chr2 197657841 . T . PASS END=197657859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:27,0 chr2 197657860 . T . PASS END=197657860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 197657861 . C . PASS END=197657863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 197657864 . T . PASS END=197657864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 197657865 . C . PASS END=197657866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 197657867 . G . PASS END=197657876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 197662521 . C . PASS END=197662525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,108,1620:0,115,255:38,0 chr2 197662526 . T C, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.385;ReadPosRankSum=2.077;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,24,0:0.585,0.000:41:9,10,0:8,14,0:47:85,0,47,822,563,1385:255,0,255:17,0:5.0000e+01,8.2318e-05,5.0468e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,4,19,5:13,4,13,11 chr2 197662527 . T . PASS END=197662563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,108,1304:0,108,255:40,0 chr2 197662564 . T . PASS END=197662632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:57:0,120,1800:0,152,255:40,0 chr2 197664219 . C . PASS END=197664315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:34:0,84,1244:0,87,255:40,0 chr2 197664316 . T . PASS END=197664325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:32:0,72,1080:0,80,255:25,0 chr2 197664326 . A . PASS END=197664332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 197664333 . C . PASS END=197664339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:25,0 chr2 197664340 . A . PASS END=197664349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:42:20:0,42,630:0,60,255:16,0 chr2 197664350 . T . PASS END=197664352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:16:0,36,540:0,48,255:12,0 chr2 197672167 . T . PASS END=197672346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:37:0,96,1396:0,101,255:40,0 chr2 197673938 . C . PASS END=197673940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1011:0,87,255:29,0 chr2 197673941 . A . PASS END=197673941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr2 197673942 . T . PASS END=197673944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 197673945 . C . PASS END=197673945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr2 197673946 . T . PASS END=197674002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1141:0,80,255:40,0 chr2 197674003 . T . PASS END=197674003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1496:0,74,255:40,0 chr2 197674004 . C . PASS END=197674045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:42:0,90,1470:0,90,255:40,0 chr2 197674046 . A . PASS END=197674046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1400:0,77,255:34,0 chr2 197674047 . G . PASS END=197674096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:31:0,84,1222:0,86,255:40,0 chr2 197674097 . G . PASS END=197674097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 197674098 . C . PASS END=197674098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 197674099 . T . PASS END=197674111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:25:0,71,1031:0,71,255:25,0 chr2 197705958 . T . PASS END=197706096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:47:0,120,1800:0,125,255:40,0 chr2 197707445 . C . PASS END=197707549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:56:0,120,1800:0,129,255:40,0 chr2 197708612 . C . PASS END=197708630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1139:0,80,255:34,0 chr2 197708631 . A . PASS END=197708631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1105:0,72,255:31,0 chr2 197708632 . A . PASS END=197708637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 197708638 . A . PASS END=197708638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:32,0 chr2 197708639 . G . PASS END=197708799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:34:0,84,1187:0,87,255:40,0 chr2 197708801 . T . PASS END=197708801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 197709248 . C . PASS END=197709298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:78:0,120,1800:0,203,255:40,0 chr2 197710601 . C . PASS END=197710601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 197710606 . C . PASS END=197710741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:53:0,120,1800:0,142,255:40,0 chr2 197711727 . C . PASS END=197711738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:33:0,91,1152:0,91,255:35,0 chr2 197711739 . A . PASS END=197711739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:35,0 chr2 197711740 . G . PASS END=197711924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,2:84:84:38:0,84,1390:0,84,255:40,0 chr2 197712670 . C . PASS END=197712761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:84:0,120,1800:0,190,255:40,0 chr2 197729711 . C . PASS END=197729804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:54:0,120,1800:0,136,255:40,0 chr2 197735665 . C . PASS END=197735703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:105:0,120,1800:0,255,255:40,0 chr2 197737165 . C . PASS END=197737273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:45:0,120,1800:0,135,255:40,0 chr2 197737684 . T . PASS END=197737750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:85:0,120,1800:0,205,255:40,0 chr2 197737754 . T . PASS END=197737754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,249,255:40,0 chr2 197738252 . C . PASS END=197738303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:63:0,120,1800:0,150,255:40,0 chr2 197738305 . T . PASS END=197738305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:90:0,120,1800:0,255,255:40,0 chr2 197738409 . C . PASS END=197738482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:55:0,120,1800:0,149,255:40,0 chr2 197740470 . C . PASS END=197740545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:77:0,120,1800:0,133,255:40,0 chr2 197744800 . C . PASS END=197744841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,146,255:40,0 chr2 197744842 . C . PASS END=197744864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:84:55:0,84,1260:0,165,255:40,0 chr2 197744865 . T . PASS END=197744877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:63:47:0,63,945:0,130,255:26,0 chr2 197750148 . C . PASS END=197750199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:81:0,120,1800:0,199,255:40,0 chr2 197750558 . C . PASS END=197750604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:68:0,120,1800:0,204,255:40,0 chr2 197755552 . C . PASS END=197755635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:68:0,120,1800:0,184,255:40,0 chr2 197755637 . T . PASS END=197755637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 197757070 . G . PASS END=197757125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,120,1800:0,161,255:40,0 chr2 197757864 . C . PASS END=197757969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:64:0,120,1800:0,154,255:40,0 chr2 197761854 . C . PASS END=197761861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:79:0,120,1800:0,226,255:40,0 chr2 197761862 . G . PASS END=197761921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:78:0,120,1800:0,205,255:40,0 chr2 197763041 . C . PASS END=197763093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:54:0,120,1800:0,139,255:40,0 chr2 197767309 . C . PASS END=197767466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,110,1456:0,110,255:40,0 chr2 197777606 . C . PASS END=197777626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:45:0,96,1598:0,96,255:40,0 chr2 197777627 . G . PASS END=197777777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:45:0,113,1670:0,113,255:40,0 chr2 197781142 . C . PASS END=197781316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:85:33:0,85,1021:0,85,255:40,0 chr2 197781317 . A . PASS END=197781317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1287:0,73,255:30,0 chr2 197784721 . C . PASS END=197784721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:34,0 chr2 197784722 . T . PASS END=197784874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:36:0,84,1339:0,84,255:40,0 chr2 197786905 . T . PASS END=197786910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:25,0 chr2 197791194 . C . PASS END=197791195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:28,0 chr2 197791196 . G . PASS END=197791196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 197791197 . A . PASS END=197791197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 197791198 . T . PASS END=197791198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:28,0 chr2 197791199 . A . PASS END=197791239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:30:0,90,1044:0,90,255:40,0 chr2 197791240 . T . PASS END=197791240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1313:0,76,255:39,0 chr2 197791241 . C . PASS END=197791250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:41:0,89,1261:0,89,255:40,0 chr2 197791251 . G . PASS END=197791251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1248:0,57,255:36,0 chr2 197791252 . A . PASS END=197791272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1435:0,96,255:40,0 chr2 197791273 . A . PASS END=197791273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:77:48:0,77,1369:0,77,255:36,0 chr2 197791274 . G . PASS END=197791282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:41:0,80,1333:0,80,255:40,0 chr2 197791283 . G . PASS END=197791283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:54:45:0,54,1262:0,54,255:40,0 chr2 197791284 . A . PASS END=197791290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:45:0,96,1485:0,96,255:40,0 chr2 197791291 . A . PASS END=197791291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1388:0,69,255:40,0 chr2 197791292 . T . PASS END=197791292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 197791293 . G . PASS END=197791293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:62:45:0,62,1197:0,62,255:37,0 chr2 197791294 . A . PASS END=197791302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:44:0,85,1337:0,85,255:40,0 chr2 197791303 . A . PASS END=197791303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:67:44:0,67,1067:0,67,255:36,0 chr2 197791304 . A . PASS END=197791340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1286:0,89,255:40,0 chr2 197792314 . C . PASS END=197792334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1111:0,90,255:37,0 chr2 197832163 . T . PASS END=197832170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,163,255:40,0 chr2 197854315 . T . PASS END=197854373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,162,255:40,0 chr2 197855404 . T . PASS END=197855406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 197855407 . A . PASS END=197855407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 197855408 . A . PASS END=197855436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,848:0,66,255:26,0 chr2 197855437 . G . PASS END=197855437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:27,0 chr2 197855438 . T . PASS END=197855627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:30:0,83,1074:0,83,255:40,0 chr2 197855628 . C . PASS END=197855628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:32,0 chr2 197855629 . G . PASS END=197855641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:36:0,84,1260:0,101,255:35,0 chr2 197855642 . G . PASS END=197855651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:33:0,69,1035:0,83,255:25,0 chr2 197855804 . T . PASS END=197855820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:45:0,102,1532:0,102,255:40,0 chr2 197857480 . T . PASS END=197857532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:91:0,120,1800:0,244,255:40,0 chr2 197858307 . C . PASS END=197858324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:26,0 chr2 197858325 . G . PASS END=197858325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:26,0 chr2 197858326 . T . PASS END=197858344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,980:0,81,255:31,0 chr2 197858345 . A . PASS END=197858345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 197858346 . G . PASS END=197858384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1127:0,83,255:33,0 chr2 197858385 . C . PASS END=197858398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:27:0,75,1125:0,81,255:26,0 chr2 197860099 . T . PASS END=197860185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:74:0,120,1800:0,209,255:40,0 chr2 197863061 . T . PASS END=197863063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,148,255:40,0 chr2 197863064 . A . PASS END=197863143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:55:0,120,1800:0,152,255:40,0 chr2 197863631 . C . PASS END=197863634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 197863635 . A . PASS END=197863635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 197863636 . G . PASS END=197863640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:23,0 chr2 197863641 . T . PASS END=197863641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 197863642 . G . PASS END=197863645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr2 197863646 . G . PASS END=197863682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,839:0,69,255:25,0 chr2 197863683 . T C, 50.00 PASS DP=23;MQ=250.00;MQRankSum=3.841;ReadPosRankSum=3.324;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:8,15,0:0.652,0.000:23:6,7,0:2,8,0:46:85,0,45,536,286,822:255,0,241:8,0:5.0000e+01,1.0769e-04,4.8300e+01,4.5000e+02,3.2087e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,2,9,6:6,2,5,10 chr2 197863684 . G . PASS END=197863695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,963:0,72,255:26,0 chr2 197863696 . G . PASS END=197863696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 197863697 . C . PASS END=197863697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr2 197863698 . G A, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=2.872;FractionInformativeReads=0.963;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,16,0:0.615,0.000:26:7,8,0:3,8,0:47:85,0,47,564,358,922:255,0,255:10,0:5.0000e+01,8.7237e-05,4.9966e+01,4.5000e+02,3.9239e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,2,7,9:7,3,7,9 chr2 197863699 . T . PASS END=197863700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 197863701 . C . PASS END=197863735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1063:0,83,255:33,0 chr2 197863736 . A . PASS END=197863746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:29,0 chr2 197863747 . T . PASS END=197863749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,87,255:26,0 chr2 197863750 . G . PASS END=197863750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:18:29:0,18,977:0,18,255:22,0 chr2 197863751 . C . PASS END=197863756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 197863757 . C . PASS END=197863759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 197863760 . C . PASS END=197863776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 197865143 . C . PASS END=197865226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:39:0,90,1274:0,90,255:40,0 chr2 197866477 . A . PASS END=197866507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:54:0,120,1800:0,146,255:40,0 chr2 197866508 . C . PASS END=197866564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:53:0,120,1800:0,130,255:40,0 chr2 197870418 . C . PASS END=197870419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 197870420 . T . PASS END=197870420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 197870421 . T . PASS END=197870443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:19,0 chr2 197870444 . G . PASS END=197870444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 197870445 . T . PASS END=197870445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 197870446 . G . PASS END=197870453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 197870454 . G . PASS END=197870454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 197870455 . G . PASS END=197870463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 197870464 . G . PASS END=197870464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr2 197870465 . A . PASS END=197870467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 197870468 . C . PASS END=197870468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 197870469 . A . PASS END=197870469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 197870470 . A . PASS END=197870483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,712:0,44,255:19,0 chr2 197870484 . A . PASS END=197870484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 197870485 . A . PASS END=197870533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,635:0,40,255:19,0 chr2 197870534 . G . PASS END=197870540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 197870541 . A . PASS END=197870541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 197870542 . G . PASS END=197870545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 197870546 . A . PASS END=197870547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr2 197870548 . G . PASS END=197870550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 197870551 . C . PASS END=197870551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 197870552 . G . PASS END=197870552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 197870553 . T . PASS END=197870553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 197870554 . C . PASS END=197870555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 197870556 . T . PASS END=197870573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,929:0,62,255:27,0 chr2 197870574 . A . PASS END=197870575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr2 197870576 . A . PASS END=197870580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,909:0,67,255:26,0 chr2 197870581 . T . PASS END=197870584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 197870585 . A . PASS END=197870585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:27,0 chr2 197870586 . C . PASS END=197870586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 197870587 . T . PASS END=197870587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 197870588 . T . PASS END=197870589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 197870590 . T . PASS END=197870593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1097:0,93,255:31,0 chr2 197870594 . T . PASS END=197870594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 197870595 . C . PASS END=197870595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr2 197870596 . C . PASS END=197870596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 197870597 . A . PASS END=197870599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 197870600 . A . PASS END=197870600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 197870601 . G . PASS END=197870601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 197870602 . C . PASS END=197870602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1061:0,38,255:25,0 chr2 197870603 . A . PASS END=197870603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:26,0 chr2 197870604 . T . PASS END=197870604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 197870605 . T . PASS END=197870605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 197870606 . T . PASS END=197870606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 197870607 . G . PASS END=197870607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:26,0 chr2 197870608 . C . PASS END=197870609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 197870610 . C . PASS END=197870618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:25,0 chr2 197870619 . C . PASS END=197870619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:22,0 chr2 197870620 . G . PASS END=197870620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 197870621 . T . PASS END=197870622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 197870623 . T . PASS END=197870624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 197870625 . C . PASS END=197870625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr2 197870626 . T . PASS END=197870628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 197870629 . C . PASS END=197870629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:21,0 chr2 197870630 . A . PASS END=197870630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 197870631 . T . PASS END=197870634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 197872530 . C . PASS END=197872647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:40:0,99,1454:0,116,255:40,2 chr2 197873668 . T . PASS END=197873679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,106,1391:0,106,255:40,0 chr2 197873680 . T . PASS END=197873680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1402:0,68,255:39,0 chr2 197873681 . C . PASS END=197873755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:98:38:0,98,1301:0,98,255:40,0 chr2 197878235 . C . PASS END=197878245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,854:0,72,255:25,0 chr2 197878246 . A . PASS END=197878246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,852:0,59,255:24,0 chr2 197878247 . G . PASS END=197878249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 197878250 . G . PASS END=197878257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1054:0,87,255:31,0 chr2 197878258 . T . PASS END=197878258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 197878259 . T . PASS END=197878265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1071:0,93,255:31,0 chr2 197878266 . A . PASS END=197878266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 197878267 . T . PASS END=197878297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:35,0 chr2 197878298 . T . PASS END=197878298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:34,0 chr2 197878299 . G . PASS END=197878363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:35:0,93,1213:0,95,255:38,0 chr2 197878364 . T . PASS END=197878364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1164:0,64,255:32,0 chr2 197878365 . C . PASS END=197878424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:29:0,80,1113:0,80,255:36,0 chr2 197878425 . C . PASS END=197878436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,71,255:20,0 chr2 197889920 . A . PASS END=197889991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:53:0,120,1800:0,142,255:40,0 chr2 197943337 . C . PASS END=197943381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:73:0,120,1800:0,186,255:40,0 chr2 197943382 . A . LowGQ END=197943385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,27:105:0:96:0,0,1944:255,0,255:40,27 chr2 197943386 . G . PASS END=197943430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:87:0,120,1800:0,208,255:40,3 chr2 197943431 . T . PASS END=197943522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:83:33:0,83,1208:0,83,255:40,0 chr2 197943523 . C . PASS END=197943525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 197943526 . A . PASS END=197943538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:42:19:0,42,630:0,57,255:17,0 chr2 197946369 . A . PASS END=197946449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,147,255:40,0 chr2 197948093 . T . PASS END=197948195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:28:0,84,1055:0,84,255:40,0 chr2 197948196 . G . PASS END=197948196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:33,0 chr2 197948197 . G . PASS END=197948218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1205:0,94,255:36,0 chr2 197948219 . T . PASS END=197948233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:26:0,62,937:0,62,255:25,0 chr2 197951404 . C . PASS END=197951472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,137,255:40,0 chr2 197953435 . C . PASS END=197953552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:53:0,120,1800:0,143,255:40,0 chr2 197954674 . C . PASS END=197954742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,152,255:40,0 chr2 197954743 . T . PASS END=197954756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,114,1710:0,141,255:40,0 chr2 197964536 . C . PASS END=197964578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1191:0,91,255:40,0 chr2 197964579 . A . PASS END=197964579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1519:0,77,255:40,0 chr2 197964580 . A . PASS END=197964637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:34:0,81,1215:0,90,255:40,0 chr2 197964638 . A . PASS END=197964647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 197964648 . T . PASS END=197964648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr2 197964649 . C . PASS END=197964654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:25,0 chr2 197975490 . C . PASS END=197975558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:35:0,93,1327:0,93,255:40,0 chr2 197975559 . C . PASS END=197975559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1481:0,79,255:36,0 chr2 197975560 . A . PASS END=197975568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:95:42:0,95,1454:0,95,255:40,0 chr2 197986056 . C . PASS END=197986072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1025:0,84,255:37,0 chr2 197986073 . C . PASS END=197986073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1257:0,56,255:35,0 chr2 197986074 . C . PASS END=197986078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,108,1620:0,111,255:40,0 chr2 197986079 . T . PASS END=197986079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:77:42:0,77,1439:0,77,255:38,0 chr2 197986080 . G . PASS END=197986085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,110,1504:0,110,255:40,0 chr2 197986086 . T . PASS END=197986268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:35:0,93,1371:0,95,255:40,0 chr2 197987374 . C . PASS END=197987505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:30:0,84,1203:0,90,255:40,0 chr2 197987506 . A . PASS END=197987507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 197987508 . C . PASS END=197987509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 197987510 . A . PASS END=197987510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 197987511 . A . PASS END=197987514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 197987515 . G . PASS END=197987516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 197990105 . C . PASS END=197990192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:38:0,92,1396:0,92,255:40,0 chr2 197990561 . C . PASS END=197990570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,629:0,51,255:18,0 chr2 197990571 . C . PASS END=197990571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:17,0 chr2 197990572 . C . PASS END=197990572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 197990573 . G . PASS END=197990587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 197990588 . G . PASS END=197990602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:36,0 chr2 197990603 . C . PASS END=197990603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr2 197990604 . C . PASS END=197990739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:37:0,90,1350:0,106,255:40,0 chr2 197990740 . T . PASS END=197990740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1316:0,78,255:33,0 chr2 197990741 . A . PASS END=197990761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1305:0,99,255:34,0 chr2 198001316 . T . PASS END=198001318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,111,1404:0,111,255:38,0 chr2 198001319 . A G, 46.08 PASS DP=38;MQ=250.00;MQRankSum=5.137;ReadPosRankSum=1.404;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,15,0:0.395,0.000:38:14,7,0:9,8,0:45:81,0,50,500,822,1322:255,0,255:23,0:4.6083e+01,1.2866e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,9,6:10,13,3,12 chr2 198001320 . C . PASS END=198001356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:39:0,103,1376:0,103,255:40,0 chr2 198001357 . A . PASS END=198001386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:45:0,120,1800:0,128,255:40,0 chr2 198011751 . C . PASS END=198011829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:97:37:0,97,1343:0,97,255:40,0 chr2 198051747 . C . PASS END=198051830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:34:0,90,1350:0,98,255:40,0 chr2 198175302 . C . PASS END=198175311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr2 198175312 . A . PASS END=198175313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 198175314 . T . PASS END=198175314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,192:0,4,192:6,0 chr2 198175315 . T . PASS END=198175328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:8,0 chr2 198257027 . T . PASS END=198257032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1082:0,82,255:34,0 chr2 198257033 . G . PASS END=198257033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1151:0,75,255:33,0 chr2 198257034 . A . PASS END=198257034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 198257035 . T . PASS END=198257035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1164:0,75,255:33,0 chr2 198257036 . A . PASS END=198257036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 198257037 . T . PASS END=198257037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:35,0 chr2 198257038 . A . PASS END=198257159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:33:0,81,1244:0,81,255:40,0 chr2 198257160 . A . PASS END=198257160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:25,0 chr2 198257161 . C . PASS END=198257167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,83,255:27,0 chr2 198257168 . G . PASS END=198257173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:28:0,60,900:0,77,255:26,0 chr2 198257174 . G . PASS END=198257180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,68,255:19,0 chr2 198257181 . A . PASS END=198257181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:17,0 chr2 198257182 . G . PASS END=198257185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,721:0,47,255:17,0 chr2 198257696 . C . PASS END=198257697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,713:0,60,255:20,0 chr2 198257698 . G . PASS END=198257699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 198257700 . A . PASS END=198257700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 198257701 . A . PASS END=198257702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,654:0,49,255:21,0 chr2 198257703 . C . PASS END=198257704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 198257705 . A . PASS END=198257705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 198257706 . T . PASS END=198257706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 198257707 . A . PASS END=198257707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:21,0 chr2 198257708 . T . PASS END=198257708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 198257709 . T . PASS END=198257709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 198257710 . G . PASS END=198257712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 198257713 . A . PASS END=198257713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,718:0,19,255:19,0 chr2 198257714 . C . PASS END=198257714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 198257715 . A . PASS END=198257715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:24,0 chr2 198257716 . T . PASS END=198257717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,941:0,78,255:26,0 chr2 198257718 . C . PASS END=198257719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 198257720 . A . PASS END=198257720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr2 198257721 . C . PASS END=198257721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 198257722 . A . PASS END=198257722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 198257723 . T . PASS END=198257729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1002:0,81,255:29,0 chr2 198257730 . A . PASS END=198257730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 198257731 . T . PASS END=198257731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 198257732 . A . PASS END=198257732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,977:0,66,255:29,0 chr2 198257733 . G . PASS END=198257757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1169:0,83,255:35,0 chr2 198257758 . C . PASS END=198257761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 198257762 . A . PASS END=198257762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:32,0 chr2 198257763 . A . PASS END=198257763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 198257764 . C . PASS END=198257764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:31,0 chr2 198257765 . T . PASS END=198257794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1074:0,82,255:34,0 chr2 198257795 . T C, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,24,0:0,11,0:102:190,105,0,1357,105,1357:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,23:0,0,9,26 chr2 198257796 . A . PASS END=198257816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1250:0,89,255:36,0 chr2 198257817 . A . PASS END=198257817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:34,0 chr2 198257818 . A . PASS END=198257832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1266:0,92,255:36,0 chr2 198257833 . A . PASS END=198257833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1197:0,74,255:32,0 chr2 198257834 . A . PASS END=198257867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:32:0,86,1039:0,86,255:34,0 chr2 198257868 . A . PASS END=198257871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,96,255:23,0 chr2 198257872 . G . PASS END=198257898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 198257899 . T . PASS END=198257900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 198257901 . T . PASS END=198257905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 198257906 . A . PASS END=198257909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:17:0,36,540:0,51,255:13,0 chr2 198257910 . T . PASS END=198257910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,407:0,28,255:11,0 chr2 198257911 . C . PASS END=198257912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 198260780 . C . PASS END=198261052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:39:0,99,1459:0,103,255:40,0 chr2 198262709 . C . PASS END=198262840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:46:0,114,1710:0,133,255:40,0 chr2 198263185 . C . PASS END=198263305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:65:0,120,1800:0,195,255:40,2 chr2 198263693 . C . PASS END=198263708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr2 198263709 . A . PASS END=198263734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,67,255:26,0 chr2 198263735 . G . PASS END=198263735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 198263736 . C . PASS END=198263740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 198263741 . C . PASS END=198263751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr2 198263752 . G . PASS END=198263752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:12,0 chr2 198264779 . C . PASS END=198264890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:53:0,120,1800:0,149,255:40,0 chr2 198264976 . C . PASS END=198265135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:47:0,120,1800:0,129,255:40,0 chr2 198265136 . A . PASS END=198265158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:39:0,101,1443:0,101,255:40,0 chr2 198265439 . C . PASS END=198265488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,118,1800:0,118,255:40,0 chr2 198265489 . C . PASS END=198265525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:60:0,120,1800:0,144,255:40,0 chr2 198265526 . A G, 241.70 PASS DP=65;MQ=249.89;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,65,0:1.000,0.000:65:0,35,0:0,30,0:192:279,195,0,2422,195,2422:255,195,0:0,0:2.4170e+02,1.9170e+02,0.0000e+00,4.5000e+02,2.2647e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,34:0,0,27,38 chr2 198265527 . C . PASS END=198265563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:62:0,120,1800:0,135,255:40,1 chr2 198265564 . T . PASS END=198265595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:47:0,106,1753:0,106,255:40,0 chr2 198265596 . A . PASS END=198265596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1678:0,78,255:40,0 chr2 198265597 . C . PASS END=198265643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:38:0,84,1260:0,84,255:40,0 chr2 198265644 . A . PASS END=198265649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:60:35:0,60,900:0,105,255:26,0 chr2 198265650 . G . PASS END=198265652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:57:33:0,57,855:0,99,255:19,0 chr2 198265653 . T . PASS END=198265657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:20,0 chr2 198265658 . T . PASS END=198265660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,836:0,53,255:19,0 chr2 198266124 . C . PASS END=198266249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:94:45:0,94,1623:0,94,255:40,0 chr2 198266466 . C . PASS END=198266612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,102,1527:0,102,255:40,0 chr2 198266709 . C . PASS END=198266726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:33,0 chr2 198266727 . G . PASS END=198266727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 198266728 . A . PASS END=198266832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1163:0,88,255:40,0 chr2 198266833 . T . PASS END=198266833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1418:0,76,255:39,0 chr2 198266834 . T . PASS END=198266854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:38:0,90,1350:0,92,255:40,0 chr2 198267280 . C . PASS END=198267286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:52:19:0,52,698:0,52,255:19,0 chr2 198267287 . A . PASS END=198267289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 198267290 . G . PASS END=198267290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,695:0,63,255:21,0 chr2 198267291 . A . PASS END=198267291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,637:0,33,255:20,0 chr2 198267292 . T . PASS END=198267304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,853:0,66,255:26,0 chr2 198267305 . T . PASS END=198267308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr2 198267309 . A . PASS END=198267309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 198267310 . G . PASS END=198267310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 198267311 . A . PASS END=198267311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:27,0 chr2 198267312 . T . PASS END=198267317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 198267318 . A . PASS END=198267318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 198267319 . A . PASS END=198267320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1178:0,83,255:32,0 chr2 198267321 . A . PASS END=198267321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:10:33:0,10,834:0,10,255:28,0 chr2 198267322 . T . PASS END=198267340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1190:0,81,255:37,0 chr2 198267341 . A . PASS END=198267341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1267:0,75,255:36,0 chr2 198267342 . G . PASS END=198267550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:37:0,81,1278:0,81,255:40,0 chr2 198267673 . C . PASS END=198267727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,117,1755:0,127,255:40,0 chr2 198267728 . T . PASS END=198267741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:58:0,81,1215:0,136,255:33,0 chr2 198267742 . T . PASS END=198267745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:66:57:0,66,990:0,171,255:26,0 chr2 198267746 . A . PASS END=198267751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:42:57:0,42,630:0,155,255:17,0 chr2 198267752 . A . PASS END=198267753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,2:57:33:57:0,33,495:0,138,255:11,0 chr2 198267754 . G . PASS END=198267756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:21:55:0,21,315:0,152,255:7,0 chr2 198267757 . G . PASS END=198267757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:12:53:0,12,180:0,159,255:4,0 chr2 198267758 . A . PASS END=198267759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:6:52:0,6,90:0,156,255:2,0 chr2 198268309 . C . PASS END=198268488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:32:0,80,1113:0,80,255:40,0 chr2 198269800 . C . PASS END=198269901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:59:0,120,1800:0,162,255:40,0 chr2 198269999 . C . PASS END=198270185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:84:31:0,84,1087:0,89,255:40,0 chr2 198270186 . G . PASS END=198270196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,68,255:26,0 chr2 198272722 . C . PASS END=198272838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1178:0,83,255:40,0 chr2 198272839 . G . PASS END=198272843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 198273093 . C . PASS END=198273099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 198273100 . A . PASS END=198273100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,771:0,58,255:24,0 chr2 198273101 . G . PASS END=198273101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 198273102 . G . PASS END=198273104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 198273105 . T . PASS END=198273105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 198273106 . A . PASS END=198273274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:27:0,81,1008:0,81,255:40,0 chr2 198273275 . T . PASS END=198273294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:23:0,60,900:0,69,255:26,0 chr2 198273295 . C . PASS END=198273305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:21:0,48,720:0,50,255:19,0 chr2 198274494 . C . PASS END=198274510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,687:0,63,255:23,0 chr2 198274511 . G . PASS END=198274511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 198274512 . T . PASS END=198274522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,925:0,75,255:26,0 chr2 198274523 . C . PASS END=198274536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr2 198274537 . A . PASS END=198274537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 198274538 . C . PASS END=198274694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1102:0,86,255:40,0 chr2 198274695 . T . PASS END=198274695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1189:0,77,255:30,0 chr2 198274696 . C . PASS END=198274712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:31,0 chr2 198274713 . A . PASS END=198274719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,77,255:28,0 chr2 198274720 . A . PASS END=198274731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:18:0,42,630:0,54,255:16,0 chr2 198281465 . C . PASS END=198281465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 198281466 . T . PASS END=198281466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,875:0,45,255:23,0 chr2 198281467 . C . PASS END=198281468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:25,0 chr2 198281469 . G . PASS END=198281474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1049:0,87,255:29,0 chr2 198281475 . T . PASS END=198281476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr2 198281477 . C . PASS END=198281486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:30,0 chr2 198281487 . A . PASS END=198281487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,925:0,57,255:28,0 chr2 198281488 . G . PASS END=198281490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:30,0 chr2 198281491 . T . PASS END=198281491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 198281492 . T . PASS END=198281496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 198281497 . G . PASS END=198281498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:29,0 chr2 198281499 . G . PASS END=198281509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1125:0,90,255:31,0 chr2 198281510 . A . PASS END=198281510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1023:0,60,255:28,0 chr2 198281511 . G . PASS END=198281513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 198281514 . T . PASS END=198281514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 198281515 . G . PASS END=198281517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 198281518 . C . PASS END=198281518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:29,0 chr2 198281519 . A . PASS END=198281546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:32:0,84,1175:0,88,255:35,0 chr2 198281547 . T . PASS END=198281549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:36:0,78,1170:0,91,255:26,0 chr2 198281550 . G . PASS END=198281562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1133:0,82,255:30,0 chr2 198281563 . A . PASS END=198281565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:30:0,75,1125:0,90,255:25,0 chr2 198281566 . C . PASS END=198281566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 198281567 . T . PASS END=198281567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:27,0 chr2 198281568 . G . PASS END=198281573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 198281574 . C . PASS END=198281574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:26,0 chr2 198281575 . C . PASS END=198281578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 198281579 . G . PASS END=198281579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 198281580 . A . PASS END=198281580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 198281581 . C . PASS END=198281594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:25:0,64,915:0,64,255:26,0 chr2 198281595 . C . PASS END=198281595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:23,0 chr2 198281596 . C . PASS END=198281596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 198281597 . A . PASS END=198281598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,851:0,42,255:22,0 chr2 198281599 . C . PASS END=198281604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 198281605 . C . PASS END=198281605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 198281606 . T . PASS END=198281612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 198281613 . G . PASS END=198281614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:19,0 chr2 198281615 . T . PASS END=198281615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 198281616 . A . PASS END=198281628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:19:0,49,707:0,49,255:19,0 chr2 198281629 . T . PASS END=198281629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,661:0,29,255:17,0 chr2 198281630 . T . PASS END=198281635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:18,0 chr2 198283233 . T . PASS END=198283267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,154,255:40,0 chr2 198283268 . C . PASS END=198283304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,114,1710:0,129,255:40,0 chr2 198283305 . T C, 175.96 PASS DP=43;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,43,0:1.000,0.000:43:0,23,0:0,20,0:126:214,129,0,1638,129,1638:255,129,0:0,0:1.7596e+02,1.2596e+02,0.0000e+00,4.5000e+02,1.6073e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,22:0,0,29,14 chr2 198283306 . T . PASS END=198283312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:42:0,111,1558:0,113,255:40,0 chr2 198283656 . T . PASS END=198283675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:70:0,120,1800:0,211,255:40,0 chr2 198284294 . T . PASS END=198284300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:25:0,68,1014:0,68,255:26,0 chr2 198284301 . A . PASS END=198284324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1094:0,90,255:35,0 chr2 198284325 . G . PASS END=198284325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:33,0 chr2 198284326 . C . PASS END=198284350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:35,0 chr2 198284351 . G . PASS END=198284364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:25:0,63,945:0,75,255:25,0 chr2 198285102 . T . PASS END=198285266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:44:0,120,1800:0,129,255:40,0 chr2 198285753 . C . PASS END=198285773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:33:0,99,1205:0,99,255:40,0 chr2 198285774 . A . PASS END=198285774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1280:0,70,255:37,0 chr2 198285775 . T . PASS END=198285857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:48:0,114,1723:0,114,255:40,0 chr2 198288532 . A . PASS END=198288698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:84:38:0,84,1347:0,84,255:40,0 chr2 198299696 . C . PASS END=198299723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1441:0,101,255:39,0 chr2 198318285 . A . PASS END=198318285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 198318286 . T . PASS END=198318293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr2 198318294 . C . PASS END=198318294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 198318295 . G . PASS END=198318295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,604:0,48,255:16,0 chr2 198318296 . G . PASS END=198318296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 198318297 . A . PASS END=198318300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,588:0,48,255:19,0 chr2 198318301 . G . PASS END=198318316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,768:0,63,255:23,0 chr2 198318317 . A . PASS END=198318317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,656:0,52,255:21,0 chr2 198318318 . A . PASS END=198318319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 198318320 . G . PASS END=198318320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 198318321 . G . PASS END=198318329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 198318330 . G . PASS END=198318330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 198318331 . G . PASS END=198318359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,754:0,60,255:22,0 chr2 198318360 . G . PASS END=198318360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 198318361 . G . PASS END=198318362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 198318363 . G . PASS END=198318388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr2 198318754 . A . PASS END=198318760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1418:0,101,255:38,0 chr2 198318761 . T . PASS END=198318761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:55:40:0,55,1073:0,55,255:35,0 chr2 198318762 . T . PASS END=198318773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1253:0,100,255:39,0 chr2 198324656 . A . PASS END=198324667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:26,0 chr2 198324668 . C . PASS END=198324805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:29:0,87,1080:0,87,255:40,0 chr2 198327263 . A . PASS END=198327455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:37:0,93,1264:0,94,255:40,0 chr2 198334794 . G . PASS END=198334895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:80:33:0,80,1358:0,80,255:40,0 chr2 198338481 . A . PASS END=198338481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,803:0,28,255:26,0 chr2 198338482 . T . PASS END=198338483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 198338484 . T . PASS END=198338484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 198338485 . C . PASS END=198338485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,923:0,32,255:26,0 chr2 198338486 . T . PASS END=198338486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 198338487 . T . PASS END=198338487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,945:0,40,255:24,0 chr2 198338488 . T . PASS END=198338489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:25,0 chr2 198338490 . G . PASS END=198338490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:25,0 chr2 198338491 . A . PASS END=198338491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:25,0 chr2 198338492 . A . PASS END=198338492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,915:0,32,255:25,0 chr2 198338493 . T . PASS END=198338494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:25,0 chr2 198338495 . T . PASS END=198338495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:25,0 chr2 198338496 . C . PASS END=198338496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:25,0 chr2 198338497 . G . PASS END=198338497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,860:0,37,255:25,0 chr2 198338498 . A . PASS END=198338498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,934:0,70,255:26,0 chr2 198338499 . T . PASS END=198338499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1010:0,56,255:27,0 chr2 198338500 . C . PASS END=198338508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:80:32:0,80,1133:0,80,255:38,0 chr2 198338509 . A . PASS END=198338509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:37,0 chr2 198338510 . T . PASS END=198338513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:41:0,84,1443:0,84,255:38,0 chr2 198338514 . C . PASS END=198338514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1387:0,59,255:37,0 chr2 198338515 . A . PASS END=198338515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1466:0,107,255:39,0 chr2 198338516 . G . PASS END=198338517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:73:41:0,73,1311:0,73,255:38,0 chr2 198338518 . T . PASS END=198338519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1344:0,90,255:38,0 chr2 198338520 . G . PASS END=198338520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1342:0,68,255:38,0 chr2 198338521 . C . PASS END=198338618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:33:0,81,1215:0,88,255:40,0 chr2 198338619 . T . PASS END=198338619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,976:0,60,255:25,0 chr2 198338620 . T . PASS END=198338623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 198338624 . G . PASS END=198338624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:26,0 chr2 198338625 . C . PASS END=198338631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 198338632 . A . PASS END=198338640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:27:0,60,900:0,65,255:24,0 chr2 198338641 . A . PASS END=198338648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,63,255:18,0 chr2 198351770 . T . PASS END=198351770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 198351771 . T . PASS END=198351771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 198351772 . A . PASS END=198351772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 198351773 . G . PASS END=198351773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 198351774 . A . PASS END=198351774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,404:0,8,255:11,0 chr2 198351775 . A . PASS END=198351775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 198351776 . C . PASS END=198351776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 198351777 . A . PASS END=198351777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 198351778 . T . PASS END=198351785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 198351786 . C . PASS END=198351808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:18,0 chr2 198351809 . C . PASS END=198351819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:23,0 chr2 198351820 . T . PASS END=198351820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr2 198351821 . T . PASS END=198351825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,947:0,75,255:26,0 chr2 198351826 . G . PASS END=198351826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 198351827 . G . PASS END=198351829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 198351830 . C . PASS END=198351838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 198351839 . T . PASS END=198351839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 198351840 . T . PASS END=198351865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,978:0,81,255:29,0 chr2 198351866 . T . PASS END=198351866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:28,0 chr2 198351867 . G . PASS END=198351874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 198351875 . T . PASS END=198351879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 198351880 . G . PASS END=198351880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:25,0 chr2 198351881 . A . PASS END=198351888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 198351889 . C . PASS END=198351889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 198351890 . A . PASS END=198351893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:27,0 chr2 198351894 . G . PASS END=198351894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,880:0,64,255:26,0 chr2 198351895 . C . PASS END=198351896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 198351897 . G . PASS END=198351897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 198351898 . C . PASS END=198351898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 198351899 . A . PASS END=198351900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,970:0,67,255:27,0 chr2 198351901 . C . PASS END=198351911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,992:0,81,255:27,0 chr2 198351912 . G . PASS END=198351922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,870:0,64,255:25,0 chr2 198352582 . C . PASS END=198352760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:37:0,89,1366:0,89,255:40,0 chr2 198353041 . C . PASS END=198353215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,129,255:40,0 chr2 198353726 . C . PASS END=198353728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1280:0,102,255:34,0 chr2 198353729 . C . PASS END=198353729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr2 198353730 . A . PASS END=198353971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:36:0,108,1327:0,108,255:40,0 chr2 198354921 . T . PASS END=198355020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1249:0,89,255:40,0 chr2 198355023 . G . PASS END=198355023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 198358036 . A . PASS END=198358036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,870:0,75,255:25,0 chr2 198358044 . T . PASS END=198358044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 198358048 . C . PASS END=198358049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 198358050 . A . PASS END=198358055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 198358056 . G . PASS END=198358056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:29,0 chr2 198358057 . A . PASS END=198358189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1164:0,83,255:40,0 chr2 198358190 . A . PASS END=198358205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,856:0,75,255:25,0 chr2 198358206 . A . PASS END=198358216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:23:0,51,765:0,69,255:18,0 chr2 198358872 . T . PASS END=198358974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,3:116:99:74:0,120,1800:0,222,255:40,0 chr2 198358978 . T . PASS END=198358978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:112:0,120,1800:0,255,255:40,0 chr2 198359381 . C . PASS END=198359476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:75:0,120,1800:0,212,255:40,0 chr2 198360018 . C . PASS END=198360100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:53:0,120,1800:0,135,255:40,0 chr2 198360115 . T . PASS END=198360115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 198361864 . C . PASS END=198361864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,907:0,53,255:27,0 chr2 198361865 . T . PASS END=198361865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 198361866 . C . PASS END=198361866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 198361867 . T . PASS END=198361868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr2 198361869 . C . PASS END=198361871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 198361872 . A . PASS END=198361872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr2 198361873 . T . PASS END=198361875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 198361876 . C . PASS END=198361876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 198361877 . C . PASS END=198361877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 198361878 . A . PASS END=198361878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 198361879 . C . PASS END=198361892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1047:0,84,255:34,0 chr2 198361893 . T . PASS END=198361893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:35,0 chr2 198361894 . T . PASS END=198361980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:86:37:0,86,1299:0,86,255:40,0 chr2 198361981 . T . PASS END=198362017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,146,255:40,0 chr2 198362018 . T C, 256.75 PASS DP=70;MQ=167.21;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,34,0:0,36,0:207:295,210,0,2632,210,2632:255,210,0:0,0:2.5675e+02,2.0675e+02,0.0000e+00,4.5000e+02,2.4152e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,34:0,0,32,38 chr2 198362019 . T . PASS END=198362055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:69:0,120,1800:0,177,255:40,0 chr2 198362056 . T . PASS END=198362116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:45:0,120,1800:0,125,255:40,0 chr2 198362123 . G . PASS END=198362124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 198363398 . C . PASS END=198363398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 198363399 . C . PASS END=198363412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,421:0,33,255:12,0 chr2 198363413 . T . PASS END=198363413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 198363414 . A . PASS END=198363436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 198363437 . G . PASS END=198363451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,620:0,48,255:19,0 chr2 198363452 . G . PASS END=198363464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 198363465 . G . PASS END=198363475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 198363476 . C . PASS END=198363496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 198363497 . A . PASS END=198363497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 198363498 . A . PASS END=198363505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 198363506 . T . PASS END=198363574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:16:0,45,576:0,48,255:19,0 chr2 198364491 . G . PASS END=198364491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 198364516 . G . PASS END=198364516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 198364631 . G . PASS END=198364631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 198365161 . A . PASS END=198365163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:38:0,96,1440:0,101,255:34,0 chr2 198365798 . G . PASS END=198365800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 198365801 . G . PASS END=198365819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1020:0,84,255:31,0 chr2 198365820 . T . PASS END=198365820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 198365821 . T . PASS END=198365935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:31:0,86,1235:0,86,255:40,0 chr2 198365936 . G . PASS END=198365936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:33,0 chr2 198365937 . C . PASS END=198365960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1067:0,82,255:34,0 chr2 198365961 . A . PASS END=198365961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr2 198365962 . G . PASS END=198365962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 198367763 . G . PASS END=198367900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,105,1313:0,106,255:40,0 chr2 198367933 . G . PASS END=198367983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,111,1665:0,127,255:40,0 chr2 198380811 . A . PASS END=198380813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:26,0 chr2 198380814 . G . PASS END=198380823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 198380824 . A . PASS END=198380824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 198380825 . G . PASS END=198380832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr2 198380833 . C . PASS END=198380833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,938:0,37,255:25,0 chr2 198380834 . A . PASS END=198380842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 198380843 . G . PASS END=198380870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,71,255:26,0 chr2 198381334 . C . PASS END=198381339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 198381340 . C . PASS END=198381348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 198381349 . C . PASS END=198381349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:25,0 chr2 198381350 . A . PASS END=198381353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,921:0,65,255:26,0 chr2 198381354 . T . PASS END=198381354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:17:27:0,17,806:0,17,255:23,0 chr2 198381355 . G . PASS END=198381355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 198381356 . T . PASS END=198381356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 198381357 . C . PASS END=198381370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1066:0,84,255:30,0 chr2 198381371 . G . PASS END=198381372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 198381373 . G . PASS END=198381378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 198381379 . A . PASS END=198381379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,926:0,60,255:27,0 chr2 198381380 . T . PASS END=198381439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:30:0,80,1056:0,80,255:33,0 chr2 198381440 . G . PASS END=198381440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 198381441 . G . PASS END=198381442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 198381443 . C . PASS END=198381457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:26,0 chr2 198388348 . G . PASS END=198388371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:72:0,120,1800:0,137,255:40,0 chr2 198388372 . T . LowGQ END=198388372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,16:83:0:83:0,0,1722:40,0,255:40,0 chr2 198388373 . C . PASS END=198388410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:63:0,120,1800:0,149,255:40,0 chr2 198400254 . T . PASS END=198400354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,99,1485:0,101,255:40,0 chr2 198404835 . G . PASS END=198404877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,161,255:40,0 chr2 198405075 . A . PASS END=198405161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,120,1800:0,122,255:40,0 chr2 198413060 . T . PASS END=198413131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:42:0,95,1483:0,95,255:40,0 chr2 198413132 . C . PASS END=198413132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1490:0,77,255:37,0 chr2 198413133 . C . PASS END=198413133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:85:44:0,85,1512:0,85,255:37,0 chr2 198413134 . C . PASS END=198413134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1421:0,74,255:36,0 chr2 198413135 . A . PASS END=198413135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1443:0,107,255:37,0 chr2 198413136 . G . PASS END=198413137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1374:0,68,255:36,0 chr2 198413138 . A . PASS END=198413138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1374:0,90,255:36,0 chr2 198413139 . G . PASS END=198413139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1313:0,51,255:37,0 chr2 198414999 . G . PASS END=198415110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:54:0,120,1800:0,151,255:40,0 chr2 198415239 . A . PASS END=198415370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,132,255:40,0 chr2 198436732 . T . LowGQ END=198436736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:0:15:0,0,459:0,0,255:16,0 chr2 198436737 . T . PASS END=198436738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr2 198436739 . C . PASS END=198436749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:24,0 chr2 198436750 . A . PASS END=198436750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 198436751 . G . PASS END=198436758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,864:0,72,255:25,0 chr2 198436759 . A . PASS END=198436768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:30,0 chr2 198436769 . T . PASS END=198436769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 198436770 . C . PASS END=198436778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1021:0,90,255:31,0 chr2 198436779 . C . PASS END=198436779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 198436780 . G . PASS END=198436950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:32:0,83,1186:0,83,255:40,0 chr2 198436951 . T . PASS END=198436951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1352:0,76,255:34,0 chr2 198436952 . C . PASS END=198436959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:93:39:0,93,1474:0,93,255:37,0 chr2 198436960 . G . PASS END=198436960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr2 198436961 . G . PASS END=198436968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1328:0,100,255:37,0 chr2 198436969 . C . PASS END=198436970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:37:0,62,1304:0,62,255:34,0 chr2 198436971 . T . PASS END=198436972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1349:0,95,255:34,0 chr2 198436973 . T . PASS END=198436973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1211:0,56,255:33,0 chr2 198436974 . C . PASS END=198436974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:33,0 chr2 198436975 . T . PASS END=198436976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1233:0,89,255:34,0 chr2 198436977 . C . PASS END=198436977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:29,0 chr2 198436978 . A . PASS END=198436984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,91,255:30,0 chr2 198436985 . A . PASS END=198436985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1195:0,74,255:28,0 chr2 198436986 . T . PASS END=198436986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 198436987 . G . PASS END=198436987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:27,0 chr2 198436988 . T . PASS END=198436990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 198436991 . C . PASS END=198436991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1086:0,60,255:28,0 chr2 198436992 . G . PASS END=198436993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 198436994 . C . PASS END=198436996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1048:0,63,255:29,0 chr2 198436997 . G . PASS END=198436997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 198436998 . C . PASS END=198436998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 198436999 . T . PASS END=198436999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:28,0 chr2 198437000 . T . PASS END=198437001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 198437002 . C . PASS END=198437003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 198437004 . T . PASS END=198437004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 198452716 . C . PASS END=198452745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,146,255:40,0 chr2 198460715 . A . PASS END=198460793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,178,255:40,0 chr2 198480600 . C . PASS END=198480703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:37:0,111,1402:0,111,255:40,0 chr2 198482524 . C . PASS END=198482645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:52:0,120,1800:0,146,255:40,0 chr2 198495735 . C . PASS END=198495944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:37:0,81,1327:0,81,255:40,0 chr2 198498442 . C . PASS END=198498657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:31:0,85,1157:0,85,255:40,0 chr2 198498658 . A . PASS END=198498658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:32,0 chr2 198498659 . T . PASS END=198498660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:33,0 chr2 198498661 . G . PASS END=198498661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 198498662 . A . PASS END=198498664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1218:0,86,255:31,0 chr2 198498665 . A . PASS END=198498665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:30,0 chr2 198498666 . T . PASS END=198498674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1133:0,80,255:31,0 chr2 198498675 . G . PASS END=198498676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 198498677 . T . PASS END=198498677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:26,0 chr2 198498678 . A . PASS END=198498678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:25,0 chr2 198498679 . T . PASS END=198498679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:26,0 chr2 198498680 . G . PASS END=198498684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1047:0,74,255:26,0 chr2 198498685 . C . PASS END=198498685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:25,0 chr2 198498686 . A . PASS END=198498687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 198498688 . C . PASS END=198498688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:25,0 chr2 198498689 . A . PASS END=198498691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 198498692 . T . PASS END=198498693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 198498694 . T . PASS END=198498694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 198498695 . C . PASS END=198498695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 198498696 . A . PASS END=198498696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:25,0 chr2 198498697 . T . PASS END=198498699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr2 198498700 . C . PASS END=198498701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 198498702 . C . PASS END=198498702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,955:0,53,255:27,0 chr2 198498703 . T . PASS END=198498703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr2 198498704 . T . PASS END=198498706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 198498707 . A . PASS END=198498708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 198498709 . C . PASS END=198498709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,959:0,51,255:25,0 chr2 198498710 . A . PASS END=198498710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 198498711 . G . PASS END=198498721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:27:0,45,855:0,45,255:19,0 chr2 198508882 . C . PASS END=198508913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,120,1800:0,122,255:40,0 chr2 198508914 . T . PASS END=198508950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:56:0,120,1800:0,147,255:40,0 chr2 198508951 . G A, 233.60 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,33,0:0,29,0:184:271,187,0,2396,187,2396:255,186,0:0,0:2.3360e+02,1.8360e+02,0.0000e+00,4.5000e+02,2.1837e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,30,32:0,0,31,31 chr2 198508952 . A . PASS END=198508988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,167,255:40,0 chr2 198508989 . T . PASS END=198508996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,148,255:40,0 chr2 198511207 . C . PASS END=198511390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:96:36:0,96,1440:0,99,255:40,0 chr2 198540044 . C . PASS END=198540182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:36:0,84,1407:0,84,255:40,0 chr2 198570130 . A . PASS END=198570153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,770:0,63,255:26,0 chr2 198570154 . C . PASS END=198570165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:29,0 chr2 198570166 . A . PASS END=198570166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 198570167 . C . PASS END=198570183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1094:0,87,255:31,0 chr2 198570184 . T . PASS END=198570184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1012:0,79,255:30,0 chr2 198570185 . C . PASS END=198570258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1219:0,93,255:34,0 chr2 198570259 . C . PASS END=198570262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1108:0,74,255:26,0 chr2 198570263 . C . PASS END=198570268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 198570269 . T . PASS END=198570269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 198570270 . C . PASS END=198570273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 198570274 . A . PASS END=198570309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:26,0 chr2 198570310 . G . PASS END=198570322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr2 198570323 . C . PASS END=198570332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 198570333 . G . PASS END=198570335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 198570336 . G . PASS END=198570336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,698:0,24,255:18,0 chr2 198570337 . G . PASS END=198570389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,599:0,40,255:19,0 chr2 198570390 . A . PASS END=198570392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 198570393 . C . PASS END=198570393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 198570394 . T . PASS END=198570436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,866:0,62,255:26,0 chr2 198570437 . C . PASS END=198570437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,845:0,23,255:23,0 chr2 198570438 . A . PASS END=198570451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr2 198570452 . T . PASS END=198570452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr2 198570453 . G . PASS END=198570490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,945:0,62,255:26,0 chr2 198570491 . T . PASS END=198570491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr2 198570492 . C . PASS END=198570499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 198570500 . T . PASS END=198570518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 198570519 . C . PASS END=198570522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 198570523 . T . PASS END=198570523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,765:0,15,255:23,0 chr2 198570524 . G . PASS END=198570540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 198570541 . A . PASS END=198570630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 198570631 . T . PASS END=198570632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 198570633 . G . PASS END=198570633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 198570634 . T . PASS END=198570634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 198570635 . A . PASS END=198570651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 198570652 . T . PASS END=198570714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr2 198570715 . T . PASS END=198570718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 198570719 . T . PASS END=198570719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:12,0 chr2 198570720 . C . PASS END=198570728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 198570729 . G . PASS END=198570734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 198570735 . A . PASS END=198570735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 198570736 . G . PASS END=198570737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 198570738 . C . PASS END=198570773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr2 198570774 . T . PASS END=198570774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 198570775 . T . PASS END=198570780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr2 198570781 . T . PASS END=198570781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 198570782 . T . PASS END=198570792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,637:0,54,255:18,0 chr2 198570793 . C . PASS END=198570795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 198570796 . C . PASS END=198570796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 198570797 . A . PASS END=198570814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:25,0 chr2 198570815 . A . PASS END=198570844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1117:0,80,255:31,0 chr2 198570845 . A . PASS END=198570845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 198570846 . T . PASS END=198570864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1141:0,80,255:31,0 chr2 198570865 . C . PASS END=198570865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr2 198570866 . T . PASS END=198570872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1064:0,87,255:29,0 chr2 198570873 . G . PASS END=198570873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 198570874 . G . PASS END=198570874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 198570875 . A . PASS END=198570876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 198570877 . C . PASS END=198570930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1178:0,87,255:32,0 chr2 198570931 . G . PASS END=198570944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 198570945 . T . PASS END=198570949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 198570950 . A . PASS END=198570973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,961:0,63,255:26,0 chr2 198570974 . C . PASS END=198570976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 198570977 . T . PASS END=198570977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 198570978 . G . PASS END=198570984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1027:0,84,255:29,0 chr2 198570985 . T . PASS END=198570985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 198570986 . A . PASS END=198570991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1072:0,90,255:30,0 chr2 198570992 . C . PASS END=198570992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 198570993 . T . PASS END=198570996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1148:0,83,255:32,0 chr2 198570997 . A . PASS END=198570997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:29,0 chr2 198570998 . T . PASS END=198571009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1263:0,86,255:32,0 chr2 198571010 . A . PASS END=198571010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:40:32:0,40,980:0,40,255:28,0 chr2 198571011 . T . PASS END=198571016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1103:0,82,255:31,0 chr2 198571017 . G . PASS END=198571024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1064:0,63,255:26,0 chr2 198571025 . C . PASS END=198571025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,881:0,56,255:23,0 chr2 198571026 . T . PASS END=198571029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,909:0,64,255:26,0 chr2 198571030 . T . PASS END=198571030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,817:0,34,255:24,0 chr2 198571031 . G . PASS END=198571031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 198571032 . G . PASS END=198571032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 198571033 . C . PASS END=198571033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,851:0,70,255:28,0 chr2 198571034 . C . PASS END=198571034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,956:0,56,255:28,0 chr2 198571035 . G . PASS END=198571036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,911:0,70,255:28,0 chr2 198571037 . C . PASS END=198571053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,86,255:29,0 chr2 198571054 . G . PASS END=198571054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1028:0,79,255:30,0 chr2 198571055 . G . PASS END=198571056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1105:0,93,255:31,0 chr2 198571057 . A . PASS END=198571057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 198571058 . A . PASS END=198571063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr2 198571064 . T . PASS END=198571064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,951:0,43,255:28,0 chr2 198571065 . T . PASS END=198571070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:32,0 chr2 198571071 . A . PASS END=198571074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1040:0,63,255:31,0 chr2 198571075 . C . PASS END=198571076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1350:0,96,255:32,0 chr2 198571077 . T . PASS END=198571077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:30,0 chr2 198571078 . G . PASS END=198571096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,83,255:32,0 chr2 198571097 . T . PASS END=198571098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1094:0,65,255:27,0 chr2 198571099 . C . PASS END=198571102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 198571103 . T . PASS END=198571105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 198571106 . G . PASS END=198571106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 198571107 . G . PASS END=198571117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1078:0,74,255:26,0 chr2 198571118 . G . PASS END=198571119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 198571120 . C . PASS END=198571140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 198571141 . C . PASS END=198571141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 198571142 . A . PASS END=198571155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,864:0,69,255:26,0 chr2 198571156 . G . PASS END=198571196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,967:0,84,255:30,0 chr2 198571197 . G . PASS END=198571197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 198571198 . G . PASS END=198571270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:37,0 chr2 198571271 . A . PASS END=198571271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1127:0,75,255:32,0 chr2 198571272 . C . PASS END=198571316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1241:0,86,255:34,0 chr2 198571317 . C . PASS END=198571317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:28,0 chr2 198571318 . T . PASS END=198571321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 198571322 . A . PASS END=198571323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 198571324 . C . PASS END=198571342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1164:0,85,255:33,0 chr2 198571343 . G . PASS END=198571343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 198571344 . T . PASS END=198571353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,91,255:31,0 chr2 198571354 . C . PASS END=198571354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:29,0 chr2 198571355 . G . PASS END=198571357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 198571358 . G . PASS END=198571360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 198571361 . C . PASS END=198571366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,83,255:27,0 chr2 198571367 . A . PASS END=198571368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,80,255:26,0 chr2 198571369 . A . PASS END=198571373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 198571374 . A . PASS END=198571374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 198571375 . A . PASS END=198571377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 198571378 . C . PASS END=198571378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 198571379 . C . PASS END=198571398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 198571399 . T . PASS END=198571399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:26,0 chr2 198571400 . T . PASS END=198571403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 198571404 . C . PASS END=198571441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,992:0,68,255:26,0 chr2 198571442 . C . PASS END=198571442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,945:0,42,255:24,0 chr2 198571443 . G . PASS END=198571453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,787:0,61,255:26,0 chr2 198571454 . C . PASS END=198571461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 198571462 . G . PASS END=198571468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 198571469 . A . PASS END=198571469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1163:0,80,255:27,0 chr2 198571470 . T . PASS END=198571470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:24,0 chr2 198571471 . G . PASS END=198571474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr2 198571475 . T . PASS END=198571475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 198571476 . G . PASS END=198571484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 198571485 . A . PASS END=198571545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,862:0,62,255:26,0 chr2 198571546 . C . PASS END=198571547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 198571548 . G . PASS END=198571564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,74,255:25,0 chr2 198571565 . G . PASS END=198571565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 198571566 . T . PASS END=198571566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1021:0,71,255:26,0 chr2 198571567 . G . PASS END=198571578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,889:0,81,255:27,0 chr2 198571579 . A . PASS END=198571582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 198571583 . G . PASS END=198571592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 198571593 . A . PASS END=198571594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:25,0 chr2 198571595 . G . PASS END=198571600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr2 198571601 . C . PASS END=198571621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:27:0,67,978:0,67,255:26,0 chr2 198571622 . A . PASS END=198571654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1000:0,81,255:30,0 chr2 198571655 . T . PASS END=198571656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 198571657 . C . PASS END=198571657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,970:0,46,255:23,0 chr2 198571658 . T . PASS END=198571703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,892:0,61,255:26,0 chr2 198571704 . G . PASS END=198571705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 198571706 . C . PASS END=198571732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,892:0,66,255:23,0 chr2 198571733 . T . PASS END=198571736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:17,0 chr2 198571737 . G . PASS END=198571737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 198571738 . T . PASS END=198571738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:19,0 chr2 198571739 . C . PASS END=198571739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 198571740 . T . PASS END=198571749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:44:20:0,44,698:0,44,255:19,0 chr2 198571750 . G . PASS END=198571754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,685:0,60,255:21,0 chr2 198571755 . T . PASS END=198571755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:19,0 chr2 198571756 . G . PASS END=198571780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,884:0,62,255:25,0 chr2 198571781 . T . PASS END=198571781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,787:0,44,255:21,0 chr2 198571782 . C . PASS END=198571791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:23,0 chr2 198571792 . C . PASS END=198571792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 198571793 . C . PASS END=198571808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,854:0,72,255:26,0 chr2 198571809 . T . PASS END=198571829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr2 198571830 . G . PASS END=198571831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 198571832 . G . PASS END=198571832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 198571833 . G . PASS END=198571833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 198571834 . C . PASS END=198571847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1094:0,90,255:30,0 chr2 198571848 . T . PASS END=198571848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 198571849 . G . PASS END=198571849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 198571850 . G . PASS END=198571850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:30,0 chr2 198571851 . G . PASS END=198571853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 198571854 . T . PASS END=198571854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 198571855 . T . PASS END=198571868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1133:0,83,255:32,0 chr2 198571869 . A . PASS END=198571869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:31,0 chr2 198571870 . G . PASS END=198571870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 198571871 . A . PASS END=198571890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:25:0,60,900:0,60,255:31,0 chr2 198571891 . G . PASS END=198571908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,44,255:19,0 chr2 198571909 . T . PASS END=198571911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,585:0,37,255:13,0 chr2 198593191 . C . PASS END=198593302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:60:0,120,1800:0,164,255:40,0 chr2 198607785 . T . PASS END=198607883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:34:0,102,1282:0,102,255:40,0 chr2 198620654 . C . PASS END=198620685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:79:0,120,1800:0,210,255:40,0 chr2 198621152 . C . PASS END=198621280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,2:62:99:46:0,115,1800:0,115,255:40,0 chr2 198622077 . C . PASS END=198622124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:55:0,120,1800:0,165,255:40,0 chr2 198622872 . T . PASS END=198622880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:105:0,120,1800:0,255,255:40,0 chr2 198623666 . C . PASS END=198623731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:69:0,120,1800:0,152,255:40,0 chr2 198631256 . C . PASS END=198631327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:41:0,102,1530:0,113,255:40,0 chr2 198636579 . A . PASS END=198636706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:35:0,105,1295:0,105,255:40,0 chr2 198640389 . G . PASS END=198640464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:60:0,120,1800:0,142,255:40,0 chr2 198641783 . C . PASS END=198641837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:98:0,120,1800:0,214,255:40,0 chr2 198643699 . C . PASS END=198643790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:70:0,120,1800:0,174,255:40,0 chr2 198646446 . C . PASS END=198646589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:97:38:0,97,1175:0,97,255:40,0 chr2 198649725 . C . PASS END=198649739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 198650707 . C . PASS END=198650727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1158:0,86,255:34,0 chr2 198669824 . A . PASS END=198669833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 198669834 . G . PASS END=198669861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,143:0,18,143:6,0 chr2 198669862 . G . PASS END=198669870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,255:0,21,255:8,0 chr2 198669871 . G C, 71.11 PASS DP=8;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,8,0:1.000,0.000:8:0,3,0:0,5,0:21:109,24,0,310,24,310:255,24,0:0,0:7.1112e+01,2.1112e+01,3.3765e-02,3.0711e+02,5.5882e+01,3.1011e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,3:0,0,4,4 chr2 198669872 . G . PASS END=198669877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,302:0,24,255:8,0 chr2 198669878 . G . PASS END=198669883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 198669884 . G . PASS END=198669908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,310:0,24,255:8,0 chr2 198669909 . C . PASS END=198669910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 198669911 . G . PASS END=198669913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 198669914 . G . PASS END=198669935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr2 198669936 . C . PASS END=198669960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:13,0 chr2 198669961 . C . PASS END=198669969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 198669970 . C . PASS END=198669973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 198669974 . C . PASS END=198670014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 198670015 . C . PASS END=198670036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 198670037 . A . PASS END=198670037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 198670038 . C . PASS END=198670041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 198670042 . C . PASS END=198670053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 198670054 . C . PASS END=198670063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,241:6,0 chr2 198675029 . A . PASS END=198675046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:80:0,120,1800:0,205,255:40,0 chr2 198935757 . A . PASS END=198935759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:114,0:114:99:113:0,120,1800:0,255,255:40,0 chr2 198948473 . A . PASS END=198948659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:88:42:0,88,1392:0,88,255:40,2 chr2 198948660 . A . PASS END=198948660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,3:48:58:48:0,58,1561:0,58,255:34,2 chr2 198948661 . C . PASS END=198948709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1160:0,80,255:37,0 chr2 198948710 . A . PASS END=198948750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,1035:0,66,255:26,0 chr2 198948751 . A . PASS END=198948752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,980:0,84,255:28,0 chr2 198948753 . A . PASS END=198948753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:29,0 chr2 198948754 . C . PASS END=198948786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1085:0,80,255:33,0 chr2 198948787 . C . PASS END=198948811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:61:25:0,61,900:0,61,255:26,0 chr2 198948812 . T . PASS END=198948828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1066:0,90,255:31,0 chr2 198948829 . A . PASS END=198948829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 198948830 . A . PASS END=198949049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1066:0,81,255:40,0 chr2 198949050 . A . PASS END=198949050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:27,0 chr2 198949051 . A . PASS END=198949512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:35:0,80,1260:0,80,255:40,0 chr2 198949513 . G . PASS END=198949513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1382:0,76,255:36,0 chr2 198949514 . C . PASS END=198950202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:38:0,82,1388:0,82,255:40,0 chr2 198950203 . G . PASS END=198950239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:53:0,120,1800:0,149,255:40,0 chr2 198950240 . G A, 226.66 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,25,0:0,35,0:177:264,180,0,2259,180,2259:255,180,0:0,0:2.2666e+02,1.7666e+02,0.0000e+00,4.5000e+02,2.1143e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,37:0,0,30,30 chr2 198950241 . T . PASS END=198950277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:55:0,120,1800:0,152,255:40,0 chr2 198950278 . C . PASS END=198950384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:35:0,96,1300:0,102,255:40,0 chr2 198950385 . T . PASS END=198950385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:35,0 chr2 198950386 . A . PASS END=198950956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:37:0,90,1307:0,90,255:40,0 chr2 198953582 . A . PASS END=198953785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:90:34:0,90,1350:0,96,255:40,0 chr2 198966009 . A . PASS END=198966067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:54:0,120,1800:0,134,255:40,0 chr2 198966068 . A . PASS END=198966084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,114,1710:0,127,255:40,0 chr2 198968551 . G . PASS END=198968660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:53:0,120,1800:0,143,255:40,0 chr2 199011504 . G . PASS END=199011518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1141:0,80,255:34,0 chr2 199011519 . T . PASS END=199011519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:34,0 chr2 199011520 . T . PASS END=199011611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:34:0,86,1241:0,86,255:39,0 chr2 199011612 . G . PASS END=199011612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:31,0 chr2 199011613 . C . PASS END=199011636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:32,0 chr2 199011637 . T . PASS END=199011637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 199011638 . G . PASS END=199011640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 199011641 . A . PASS END=199011659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:24:0,62,856:0,62,255:24,0 chr2 199011660 . A . PASS END=199011661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 199011662 . T . PASS END=199011662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 199011663 . A . PASS END=199011663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr2 199011664 . G . PASS END=199011664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 199011665 . T . PASS END=199011665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr2 199011666 . G . PASS END=199011671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 199011672 . A . PASS END=199011672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr2 199011673 . A . PASS END=199011677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 199011678 . A . PASS END=199011686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,625:0,46,255:16,0 chr2 200136934 . T . PASS END=200136934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 200136935 . T . PASS END=200136935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 200136936 . A . PASS END=200136938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 200136939 . T . PASS END=200136939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,935:0,81,255:27,0 chr2 200136940 . C . PASS END=200136946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 200136947 . A . PASS END=200136947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 200136948 . T . PASS END=200136948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 200136949 . T . PASS END=200136950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 200136951 . C . PASS END=200136951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1094:0,60,255:28,0 chr2 200136952 . G . PASS END=200137338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1125:0,81,255:40,0 chr2 200137339 . T . PASS END=200137360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,74,255:26,0 chr2 200137361 . T . PASS END=200137361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr2 200137362 . C . PASS END=200137369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 200137370 . G . PASS END=200137389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr2 200137390 . A . PASS END=200137395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr2 200173483 . C . PASS END=200173646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:91:43:0,91,1558:0,91,255:40,0 chr2 200173647 . T . PASS END=200173680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,108,1620:0,128,255:40,0 chr2 200188526 . C . PASS END=200188681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:88:38:0,88,1255:0,88,255:40,0 chr2 200193421 . C . PASS END=200193425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:25,0 chr2 200193426 . G . PASS END=200193633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1157:0,82,255:40,0 chr2 200213420 . G . PASS END=200213420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 200213424 . C . PASS END=200213430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,902:0,62,255:26,0 chr2 200213431 . C . PASS END=200213431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 200213432 . G . PASS END=200213432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 200213433 . G . PASS END=200213433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:26,0 chr2 200213434 . T . PASS END=200213439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 200213440 . G . PASS END=200213440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,911:0,45,255:26,0 chr2 200213441 . C . PASS END=200213441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 200213442 . C . PASS END=200213442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 200213443 . A . PASS END=200213460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,928:0,81,255:30,0 chr2 200213461 . T . PASS END=200213461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:29,0 chr2 200213462 . G . PASS END=200213478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:83:31:0,83,1210:0,83,255:37,0 chr2 200213479 . T . PASS END=200213479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr2 200213480 . T . PASS END=200213487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1365:0,98,255:37,0 chr2 200213488 . T . PASS END=200213488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1315:0,78,255:35,0 chr2 200213489 . C . PASS END=200213797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:36:0,84,1187:0,84,255:40,2 chr2 200213798 . T . PASS END=200213798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:68:46:0,68,1456:0,68,255:40,2 chr2 200213799 . T . PASS END=200213859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,84,255:40,0 chr2 200213860 . C . PASS END=200213862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 200213863 . T . PASS END=200213863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:25,0 chr2 200213864 . A . PASS END=200213881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:25,0 chr2 200213882 . G . PASS END=200213896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,50,255:18,0 chr2 200233311 . C . PASS END=200233311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 200233328 . C . PASS END=200233416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:81:42:0,81,1215:0,126,255:40,0 chr2 200233417 . G . PASS END=200233417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr2 200233418 . A . PASS END=200233418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:41:0,81,1215:0,107,255:26,0 chr2 200233419 . T . PASS END=200233430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:63:27:0,63,945:0,81,255:24,0 chr2 200233432 . T . PASS END=200233432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 200245083 . T . PASS END=200245083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1148:0,85,255:32,0 chr2 200245086 . C . PASS END=200245087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 200245088 . T . PASS END=200245088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1288:0,59,255:36,0 chr2 200245089 . G . PASS END=200245165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:37:0,90,1350:0,93,255:40,0 chr2 200245166 . G . PASS END=200245177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:30:0,60,900:0,90,255:26,0 chr2 200245178 . T . PASS END=200245210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr2 200245212 . T . PASS END=200245212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 200246415 . A . PASS END=200246415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 200246417 . C . PASS END=200246436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1194:0,86,255:36,0 chr2 200246437 . C . PASS END=200246437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:36,0 chr2 200246438 . G . PASS END=200246543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:36:0,99,1327:0,99,255:40,0 chr2 200262529 . T . PASS END=200262547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,605:0,51,255:17,0 chr2 200262548 . T . PASS END=200262548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,507:0,34,255:13,0 chr2 200262549 . T . PASS END=200262553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 200262554 . G . PASS END=200262563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 200298059 . A . PASS END=200298059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1007:0,81,255:27,0 chr2 200298061 . C . PASS END=200298192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1078:0,84,255:40,0 chr2 200298193 . A . PASS END=200298193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:72:40:0,72,1139:0,72,255:34,0 chr2 200298194 . G . PASS END=200298221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,82,255:35,0 chr2 200298222 . A . PASS END=200298222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 200298223 . C . PASS END=200298224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 200298225 . G . PASS END=200298228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,79,255:26,0 chr2 200298229 . T . PASS END=200298229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,925:0,57,255:24,0 chr2 200298230 . C . PASS END=200298233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 200298234 . A . PASS END=200298234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,984:0,40,255:25,0 chr2 200298235 . A . PASS END=200298235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 200298236 . A . PASS END=200298236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,831:0,26,255:23,0 chr2 200298237 . C . PASS END=200298237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 200320592 . C . PASS END=200320594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:29,0 chr2 200320595 . C . PASS END=200320595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 200320596 . C . PASS END=200320599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 200320600 . G . PASS END=200320600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 200320601 . C . PASS END=200320609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1026:0,90,255:31,0 chr2 200320610 . C . PASS END=200320610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr2 200320611 . G . PASS END=200320614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 200320615 . C . PASS END=200320616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 200320617 . G . PASS END=200320619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1095:0,93,255:31,0 chr2 200320620 . G . PASS END=200320620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:30,0 chr2 200320621 . G . PASS END=200320625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr2 200320626 . C . PASS END=200320626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 200320627 . C . PASS END=200320628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 200320629 . G . PASS END=200320629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 200320630 . C . PASS END=200320633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 200320634 . C . PASS END=200320635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1125:0,60,255:25,0 chr2 200320636 . C . PASS END=200320658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1195:0,88,255:36,0 chr2 200320659 . C . PASS END=200320659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:35,0 chr2 200320660 . A . PASS END=200320661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 200320662 . C . PASS END=200320662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:34,0 chr2 200320663 . C . PASS END=200320671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:37:0,98,1341:0,98,255:37,0 chr2 200320672 . T . PASS END=200320672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:69:39:0,69,1246:0,69,255:33,0 chr2 200320673 . T . PASS END=200320681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1413:0,81,255:36,0 chr2 200320682 . G . PASS END=200320682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1349:0,62,255:34,0 chr2 200320683 . A . PASS END=200320685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1388:0,98,255:36,0 chr2 200320686 . C . PASS END=200320686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:36,0 chr2 200320687 . C . PASS END=200320688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:39:0,104,1421:0,104,255:37,0 chr2 200320689 . C . PASS END=200320689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:40:39:0,40,1335:0,40,255:36,0 chr2 200320690 . T . PASS END=200320692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1333:0,62,255:37,0 chr2 200320693 . A . PASS END=200320693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:36,0 chr2 200320694 . C . PASS END=200320694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr2 200320695 . G . PASS END=200320695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1402:0,101,255:35,0 chr2 200320696 . T . PASS END=200320697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1347:0,62,255:36,0 chr2 200320698 . C . PASS END=200320698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1242:0,37,255:35,0 chr2 200320699 . G . PASS END=200320699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 200320700 . G . PASS END=200320700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1280:0,45,255:34,0 chr2 200320701 . G . PASS END=200320702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 200320703 . T . PASS END=200320703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1272:0,59,255:33,0 chr2 200320704 . G . PASS END=200320705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1335:0,72,255:34,0 chr2 200320706 . C . PASS END=200320706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 200320707 . G . PASS END=200320707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr2 200320708 . C . PASS END=200320709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:34,0 chr2 200320710 . C . PASS END=200320710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:33:37:0,33,1158:0,33,255:32,0 chr2 200320711 . C . PASS END=200320711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:27,0 chr2 200320712 . G . PASS END=200320712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1202:0,31,255:25,0 chr2 200320713 . C . PASS END=200320719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,990:0,66,255:26,0 chr2 200320720 . G . PASS END=200320720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1119:0,50,255:22,0 chr2 200320721 . G . PASS END=200320722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:23,0 chr2 200320723 . C . PASS END=200320723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:20,0 chr2 200320724 . T . PASS END=200320724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,945:0,32,255:20,0 chr2 200320725 . G . PASS END=200320728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:21,0 chr2 200320729 . C . PASS END=200320729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 200320730 . G . PASS END=200320730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 200320731 . C . PASS END=200320735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:20,0 chr2 200320736 . A . PASS END=200320736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:19,0 chr2 200320737 . C . PASS END=200320737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 200320738 . G . PASS END=200320739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr2 200320740 . G . PASS END=200320740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:20,0 chr2 200320741 . C . PASS END=200320741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 200320742 . T . PASS END=200320742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,652:0,35,255:19,0 chr2 200320743 . C . PASS END=200320743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,712:0,19,255:18,0 chr2 200320744 . T . PASS END=200320758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,630:0,41,255:19,0 chr2 200320759 . A . LowGQ END=200320759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,482:15,0,255:11,0 chr2 200320760 . T . PASS END=200320760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:13,0 chr2 200528702 . T . PASS END=200528721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:32:0,88,1158:0,88,255:40,0 chr2 200528722 . A . PASS END=200528743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:40:0,82,1260:0,82,255:39,0 chr2 200528744 . C . PASS END=200528744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:28,0 chr2 200528745 . T . PASS END=200528750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:39:0,84,1260:0,87,255:29,0 chr2 200528751 . A . PASS END=200528753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:34:0,78,1170:0,78,255:25,0 chr2 200528754 . G . PASS END=200528755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:34:0,81,1215:0,89,255:27,0 chr2 200528756 . G . PASS END=200528756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1046:0,71,255:26,0 chr2 200528757 . T . PASS END=200528760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 200540408 . T . PASS END=200540433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:36:0,86,1230:0,86,255:39,0 chr2 200540434 . T . PASS END=200540434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1242:0,69,255:30,0 chr2 200540435 . T . PASS END=200540437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1194:0,86,255:31,0 chr2 200540438 . T . PASS END=200540438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1061:0,69,255:28,0 chr2 200540439 . C . PASS END=200540439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 200625473 . A . PASS END=200625476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,911:0,78,255:26,0 chr2 200625477 . T . PASS END=200625478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:28,0 chr2 200625479 . T . PASS END=200625480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1022:0,68,255:28,0 chr2 200625481 . G . PASS END=200625487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:83:30:0,83,1094:0,83,255:33,0 chr2 200625488 . C . PASS END=200625488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1210:0,69,255:32,0 chr2 200625489 . T . PASS END=200625543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:33:0,86,1241:0,86,255:38,0 chr2 200625544 . G . PASS END=200625558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:38:0,111,1665:0,114,255:38,0 chr2 200628313 . T . PASS END=200628313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 200628314 . T . PASS END=200628318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,878:0,61,255:24,0 chr2 200628319 . C . PASS END=200628355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,900:0,62,255:26,0 chr2 200628356 . T A, 49.61 PASS DP=26;MQ=250.00;MQRankSum=4.295;ReadPosRankSum=2.237;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,12,0:0.462,0.000:26:5,3,0:9,9,0:47:84,0,47,184,184,184:255,0,255:14,0:4.9609e+01,9.0861e-05,5.0000e+01,1.8438e+02,2.1915e+02,1.8739e+02:0.00,34.77,37.78,34.77,69.54,37.78:5,9,4,8:6,8,7,5 chr2 200628357 . T . PASS END=200628369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,892:0,61,255:25,0 chr2 200628370 . T . PASS END=200628382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr2 200628383 . A . PASS END=200628385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:33:19:0,33,495:0,40,255:11,0 chr2 200628386 . A . PASS END=200628393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:14:0,21,315:0,28,255:9,0 chr2 200628394 . C . PASS END=200628394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:8,0 chr2 200628395 . C . PASS END=200628395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:12:0,18,270:0,36,255:6,0 chr2 200640384 . T . PASS END=200640415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:88:41:0,88,1438:0,88,255:40,0 chr2 200648517 . C . PASS END=200648527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,120,1800:0,141,255:40,0 chr2 200648528 . C . PASS END=200648566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:90:40:0,90,1350:0,93,255:40,0 chr2 200650291 . T . PASS END=200650301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1312:0,105,255:35,0 chr2 200660455 . T . PASS END=200660495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:94:34:0,94,1380:0,94,255:40,0 chr2 200671963 . T . PASS END=200671982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,100,1676:0,100,255:40,0 chr2 200677428 . T . PASS END=200677447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:66:0,120,1800:0,174,255:40,0 chr2 200684248 . T . PASS END=200684248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr2 200684249 . T . LowGQ END=200684251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,8:30:0:30:0,0,498:96,0,255:28,11 chr2 200684252 . A . PASS END=200684252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,984:0,13,255:30,0 chr2 200684253 . A . PASS END=200684255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 200684256 . A . PASS END=200684256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr2 200684257 . A . PASS END=200684265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1048:0,90,255:30,0 chr2 200684266 . C . PASS END=200684266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,971:0,59,255:29,0 chr2 200684267 . A . PASS END=200684269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,961:0,90,255:30,0 chr2 200684270 . G . PASS END=200684270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,915:0,57,255:28,0 chr2 200684271 . C . PASS END=200684272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:30,0 chr2 200684273 . A . PASS END=200684273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:29,0 chr2 200684274 . A . PASS END=200684274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr2 200684275 . G . PASS END=200684275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:30,0 chr2 200684276 . C . PASS END=200684276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:30,0 chr2 200684277 . A . PASS END=200684295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1079:0,87,255:40,0 chr2 200684296 . T . PASS END=200684316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:96:42:0,96,1369:0,96,255:40,0 chr2 200684317 . A . PASS END=200684317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1343:0,54,255:37,0 chr2 200684318 . G . PASS END=200684420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:29:0,81,1215:0,87,255:40,0 chr2 200684421 . C . PASS END=200684436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,950:0,70,255:25,0 chr2 200684437 . C . PASS END=200684440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 200684441 . C . PASS END=200684462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 200684463 . C . PASS END=200684464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr2 200684465 . A . PASS END=200684465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:16,0 chr2 200684466 . G . PASS END=200684474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:20:0,45,675:0,60,255:17,0 chr2 200684475 . C . PASS END=200684480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,51,255:13,0 chr2 200689018 . T . PASS END=200689022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,986:0,67,255:24,0 chr2 200709122 . C . PASS END=200709229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:36:0,81,1215:0,95,255:40,0 chr2 200709230 . T . PASS END=200709230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:27,0 chr2 200709231 . A . PASS END=200709236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:28,0 chr2 200709237 . G . PASS END=200709251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 200709252 . C . PASS END=200709255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 200710798 . C . PASS END=200710893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,99,1451:0,99,255:40,0 chr2 200713571 . C . PASS END=200713684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:88:35:0,88,1235:0,88,255:40,0 chr2 200713685 . T . PASS END=200713685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1173:0,66,255:31,0 chr2 200776162 . A . PASS END=200776193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,499:0,41,255:19,0 chr2 200776194 . G . PASS END=200776200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:22,0 chr2 200776201 . C . PASS END=200776201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 200776202 . T . PASS END=200776239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,786:0,66,255:23,0 chr2 200776240 . T . PASS END=200776240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:20,0 chr2 200776241 . G . PASS END=200776244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 200776245 . T . PASS END=200776247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 200776248 . G . PASS END=200776251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 200776252 . A . PASS END=200776309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,623:0,41,255:19,0 chr2 200776310 . G . PASS END=200776310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:15,0 chr2 200776311 . C . PASS END=200776324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:16,0 chr2 200776325 . T . PASS END=200776325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 200776326 . G . PASS END=200776328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 200776329 . G . PASS END=200776329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 200776330 . C . PASS END=200776373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,659:0,44,255:18,0 chr2 200776374 . G . PASS END=200776374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:14,0 chr2 200776375 . C . PASS END=200776387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:15,0 chr2 200776388 . C . PASS END=200776388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 200776389 . G . PASS END=200776405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 200776406 . A . PASS END=200776408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 200776409 . G . PASS END=200776411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 200776412 . A . PASS END=200776416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 200776417 . C . PASS END=200776417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 200776418 . T . PASS END=200776418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 200776419 . C . PASS END=200776427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 200776428 . C . PASS END=200776428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 200776429 . C . PASS END=200776430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 200776431 . A . PASS END=200776431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 200776432 . G . PASS END=200776435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 200776436 . A . PASS END=200776436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr2 200776437 . G . PASS END=200776438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 200776439 . A . PASS END=200776439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:13,0 chr2 200776440 . G . PASS END=200776441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 200776442 . A . PASS END=200776455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 200776456 . C . PASS END=200776457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 200776458 . C . PASS END=200776461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 200776462 . C . PASS END=200776462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 200776463 . A . PASS END=200776487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:12,0 chr2 200776488 . T . PASS END=200776488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 200776489 . G . PASS END=200776494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 200789785 . A . PASS END=200789799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1158:0,86,255:35,0 chr2 200789800 . A . PASS END=200789800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1143:0,69,255:34,0 chr2 200789801 . T . PASS END=200790609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:92:36:0,92,1294:0,92,255:40,0 chr2 200797790 . T . PASS END=200797790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 200797791 . T . PASS END=200798003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:31:0,80,1055:0,80,255:40,0 chr2 200798004 . C . PASS END=200798004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:27,0 chr2 200798005 . C . PASS END=200798016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 200798017 . C . PASS END=200798017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 200798018 . T . PASS END=200798018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:25,0 chr2 200798019 . T . PASS END=200798021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 200798022 . G . PASS END=200798031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 200798032 . T . PASS END=200798032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:21,0 chr2 200798033 . A . PASS END=200798036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:22,0 chr2 200798037 . A . PASS END=200798046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:18,0 chr2 200800654 . C . PASS END=200800770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:71:0,120,1800:0,142,255:40,0 chr2 200801128 . C . PASS END=200801215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,120,1800:0,128,255:40,0 chr2 200803656 . A . PASS END=200803793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:64:0,120,1800:0,158,255:40,0 chr2 200804812 . C . PASS END=200804856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:53:0,120,1800:0,159,255:40,0 chr2 200808488 . C . PASS END=200808557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:48:0,101,1800:0,101,255:40,0 chr2 200813041 . C . PASS END=200813193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:35:0,87,1305:0,96,255:40,0 chr2 200813194 . C . PASS END=200813195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:25,0 chr2 200820116 . C . PASS END=200820193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:94:42:0,94,1604:0,94,255:40,0 chr2 200820522 . A . PASS END=200820542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:18,0 chr2 200820543 . C . PASS END=200820566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,645:0,41,255:19,0 chr2 200820567 . T . PASS END=200820586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 200820587 . C . PASS END=200820609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 200820610 . C . PASS END=200820628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr2 200820629 . G . PASS END=200820629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,169:0,1,169:5,0 chr2 200820630 . G . PASS END=200820652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,149:6,0 chr2 200820653 . C . LowGQ END=200820653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 200820654 . T . PASS END=200820659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 200820660 . C . PASS END=200820663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:9:4:0,9,135:0,12,133:3,0 chr2 200820664 . G . PASS END=200820692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,172:0,15,172:6,0 chr2 200820693 . G . PASS END=200820695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 200820696 . A . PASS END=200820697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 200820698 . G . PASS END=200820716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,266:0,24,250:9,0 chr2 200820717 . C . PASS END=200820733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 200820734 . C . PASS END=200820753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:17,0 chr2 200820754 . G . PASS END=200820776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,808:0,63,255:23,0 chr2 200820777 . G . PASS END=200820777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 200820778 . C . PASS END=200820794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:68:24:0,68,856:0,68,255:26,0 chr2 200820795 . C . PASS END=200820795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 200820796 . C . PASS END=200820796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 200820797 . T . PASS END=200820800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 200820801 . C . PASS END=200820801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr2 200820802 . G . PASS END=200820802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 200820803 . C . PASS END=200820809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 200820810 . A . PASS END=200820810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 200820811 . G . PASS END=200820813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 200820814 . C . PASS END=200820815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 200820816 . G . PASS END=200820820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1197:0,99,255:33,0 chr2 200820821 . G . PASS END=200820821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:32,0 chr2 200820822 . A . PASS END=200820825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:34,0 chr2 200820826 . C . PASS END=200820826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:32,0 chr2 200820827 . C . PASS END=200820869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1164:0,83,255:34,0 chr2 200820870 . A . PASS END=200820870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:29,0 chr2 200820871 . A . PASS END=200820882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,942:0,82,255:32,0 chr2 200820883 . G . PASS END=200820883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr2 200820884 . G . PASS END=200820892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1164:0,83,255:31,0 chr2 200820893 . T . PASS END=200820901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1116:0,77,255:26,0 chr2 200820902 . G . PASS END=200820902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 200820903 . G . PASS END=200820932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,70,255:26,0 chr2 200820933 . G . PASS END=200820962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,45,255:18,0 chr2 200820963 . G . PASS END=200820967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 200820968 . G . PASS END=200820968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 200820969 . C . PASS END=200820971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 200823991 . G . PASS END=200824062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:69:0,120,1800:0,191,255:40,1 chr2 200824477 . G . PASS END=200824603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:60:0,120,1800:0,134,255:40,0 chr2 200826504 . G . PASS END=200826639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:88:41:0,88,1443:0,88,255:40,0 chr2 200826640 . T . PASS END=200826640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1357:0,59,255:35,0 chr2 200826641 . G . PASS END=200826647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:40:0,84,1260:0,104,255:38,0 chr2 200826648 . A . PASS END=200826651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,98,255:26,0 chr2 200828456 . G . PASS END=200828534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:53:0,120,1800:0,159,255:40,0 chr2 200870466 . G . PASS END=200870500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,142,255:40,0 chr2 200873189 . A . PASS END=200873203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1102:0,90,255:32,0 chr2 201173796 . A . PASS END=201173813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,140,255:40,0 chr2 201194154 . A . PASS END=201194203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,157,255:40,1 chr2 201216012 . A . PASS END=201216013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:77:0,120,1800:0,232,255:40,0 chr2 201253946 . G . PASS END=201253955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:48:0,120,1800:0,127,255:40,0 chr2 201253956 . A G, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.990;ReadPosRankSum=0.370;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,25,0:0.510,0.000:49:11,14,0:13,11,0:47:85,0,47,185,185,185:255,0,255:24,0:5.0000e+01,8.6978e-05,4.9982e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:15,9,17,8:16,8,16,9 chr2 201253957 . C . PASS END=201253993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,119,1612:0,119,255:40,0 chr2 201253994 . T . PASS END=201254006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,135,255:40,0 chr2 201257973 . A . PASS END=201257996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:91:37:0,91,1395:0,91,255:40,0 chr2 201277034 . A . PASS END=201277057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:52:0,84,1707:0,84,255:40,0 chr2 201277058 . C . PASS END=201277142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:56:0,120,1800:0,146,255:40,0 chr2 201281102 . G . PASS END=201281151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:69:0,120,1800:0,158,255:40,0 chr2 201283973 . A . PASS END=201283988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,499:0,45,255:16,0 chr2 201283989 . G . PASS END=201283989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 201283990 . A . PASS END=201283995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 201283996 . G . PASS END=201283996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,584:0,23,255:17,0 chr2 201283997 . T . PASS END=201283997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 201283998 . C . PASS END=201283998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 201283999 . C . PASS END=201283999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 201284000 . A . PASS END=201284006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,684:0,54,255:19,0 chr2 201284007 . A . PASS END=201284015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,744:0,60,255:21,0 chr2 201284016 . A . PASS END=201284016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 201284017 . C . PASS END=201284018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 201284019 . A . PASS END=201284019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 201284020 . A . PASS END=201284021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 201284022 . A . PASS END=201284022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,648:0,49,255:21,0 chr2 201284023 . T . PASS END=201284043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,693:0,63,255:26,0 chr2 201284044 . G . PASS END=201284111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:40,0 chr2 201284112 . A . PASS END=201284112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:34,0 chr2 201284113 . G . PASS END=201284148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1247:0,89,255:35,0 chr2 201284149 . A . PASS END=201284149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1208:0,69,255:27,0 chr2 201284150 . G . PASS END=201284152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:30,0 chr2 201284153 . C . PASS END=201284153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:28,0 chr2 201284154 . T . PASS END=201284154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 201284155 . T . PASS END=201284155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:29,0 chr2 201284156 . A . PASS END=201284162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1111:0,90,255:30,0 chr2 201284163 . G . PASS END=201284163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 201284164 . T . PASS END=201284164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:28,0 chr2 201284165 . G . PASS END=201284174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,914:0,89,255:30,0 chr2 201284175 . T . PASS END=201284175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:28,0 chr2 201284176 . C . PASS END=201284177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 201284178 . C . PASS END=201284198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:26,0 chr2 201284199 . A . PASS END=201284199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 201284200 . G . PASS END=201284200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 201284201 . G . PASS END=201284216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:21:0,45,720:0,45,255:19,0 chr2 201284217 . C . PASS END=201284219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:21:0,33,495:0,63,255:12,0 chr2 201303845 . A . PASS END=201303845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 201303846 . A . PASS END=201303858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:23,0 chr2 201303859 . C . PASS END=201303859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 201303860 . T . PASS END=201303866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,914:0,72,255:26,0 chr2 201303867 . G . PASS END=201303875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 201303876 . C . PASS END=201303876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr2 201303877 . T . PASS END=201303893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:29,0 chr2 201303894 . A . PASS END=201303894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,953:0,79,255:27,0 chr2 201303895 . C . PASS END=201304027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:32:0,83,1121:0,83,255:40,0 chr2 201304028 . C . PASS END=201304028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:34,0 chr2 201304029 . A . PASS END=201304051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1225:0,89,255:35,0 chr2 201305372 . G . PASS END=201305507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:36:0,93,1395:0,107,255:40,0 chr2 201324492 . C . PASS END=201324550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:110,0:110:99:103:0,120,1800:0,255,255:40,0 chr2 201332013 . T . PASS END=201332024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 201332025 . C . PASS END=201332045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,833:0,81,255:29,0 chr2 201332046 . A . PASS END=201332046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 201332047 . A . PASS END=201332112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1072:0,87,255:40,0 chr2 201332113 . A . PASS END=201332113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr2 201332114 . G . PASS END=201332115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 201332116 . A . PASS END=201332116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1119:0,65,255:27,0 chr2 201332117 . A . PASS END=201332122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 201334637 . C . PASS END=201334739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:97:38:0,97,1303:0,97,255:40,0 chr2 201337555 . T . PASS END=201337555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 201337556 . T . PASS END=201337578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,413:0,36,255:13,0 chr2 201337579 . C . PASS END=201337579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 201337580 . C . PASS END=201337589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,485:0,45,255:18,0 chr2 201337590 . C . PASS END=201337605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,751:0,60,255:24,0 chr2 201337606 . T . PASS END=201337606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 201337607 . G . PASS END=201337626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,862:0,72,255:26,0 chr2 201337627 . C . PASS END=201337628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 201337629 . G . PASS END=201337629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 201337630 . C . PASS END=201337632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 201337633 . C . PASS END=201337638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:25,0 chr2 201337639 . G . PASS END=201337639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,892:0,34,255:22,0 chr2 201337640 . G . PASS END=201337644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr2 201337645 . A . PASS END=201337645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,922:0,47,255:23,0 chr2 201337646 . G . PASS END=201337668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,838:0,62,255:24,0 chr2 201337669 . C . PASS END=201337670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 201337671 . A . PASS END=201337672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:21,0 chr2 201337673 . T . PASS END=201337674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,786:0,41,255:21,0 chr2 201337675 . A . PASS END=201337688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 201337689 . G . PASS END=201337714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 201337715 . G . PASS END=201337719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 201337720 . G . PASS END=201337754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr2 201337755 . A . PASS END=201337775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 201342359 . A . PASS END=201342359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 201342360 . A . PASS END=201342385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr2 201342386 . T . PASS END=201342400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,452:0,42,255:16,0 chr2 201342401 . C . PASS END=201342414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:26,0 chr2 201342415 . A . PASS END=201342447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,993:0,84,255:29,0 chr2 201342448 . T . PASS END=201342449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 201342450 . A . PASS END=201342458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201342459 . C . PASS END=201342463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,917:0,64,255:26,0 chr2 201342464 . G . PASS END=201342464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201342465 . G . PASS END=201342483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:25:0,67,911:0,67,255:26,0 chr2 201342484 . C . PASS END=201342484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr2 201342485 . G . PASS END=201342485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 201342486 . A . PASS END=201342492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:29,0 chr2 201342493 . A . PASS END=201342493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 201342494 . A . PASS END=201342494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 201342495 . G . PASS END=201342496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 201342497 . C . PASS END=201342508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:30,0 chr2 201342509 . G . PASS END=201342509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:29,0 chr2 201342510 . G . PASS END=201342510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 201342511 . C . PASS END=201342512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 201342513 . T . PASS END=201342515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 201342516 . G . PASS END=201342516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 201342517 . G . PASS END=201342520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 201342521 . A . PASS END=201342521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:29,0 chr2 201342522 . A . PASS END=201342527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1058:0,90,255:31,0 chr2 201342528 . A . PASS END=201342529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,985:0,62,255:28,0 chr2 201342530 . G . PASS END=201342530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 201342531 . G . PASS END=201342531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 201342532 . C . PASS END=201342533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 201342534 . G . PASS END=201342534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 201342535 . T . PASS END=201342538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 201342539 . A . PASS END=201342540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:28,0 chr2 201342541 . A . PASS END=201342541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 201342542 . A . PASS END=201342542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr2 201342543 . A . PASS END=201342543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 201342544 . T . PASS END=201342545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 201342546 . A . PASS END=201342546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 201342547 . A . PASS END=201342553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:29:0,69,1035:0,73,255:25,0 chr2 201342554 . T . PASS END=201342554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,955:0,43,255:25,0 chr2 201342555 . C . PASS END=201342555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 201342556 . C . PASS END=201342556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1025:0,59,255:24,0 chr2 201342557 . T . PASS END=201342568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:25,0 chr2 201342569 . A . PASS END=201342569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,889:0,45,255:22,0 chr2 201342570 . C . PASS END=201342587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,967:0,65,255:26,0 chr2 201342588 . A . PASS END=201342588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201342589 . T . PASS END=201342589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 201342590 . T . PASS END=201342597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 201342598 . G . PASS END=201342598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 201342599 . C . PASS END=201342602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201342603 . G . PASS END=201342603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,963:0,53,255:27,0 chr2 201342604 . G . PASS END=201342605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201342606 . G . PASS END=201342607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 201342608 . A . PASS END=201342608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201342609 . G . PASS END=201342609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 201342610 . G . PASS END=201342613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201342614 . C . PASS END=201342614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 201342615 . A . PASS END=201342625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 201342626 . A . PASS END=201342626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 201342627 . C . PASS END=201342628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 201342629 . T . PASS END=201342655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,78,255:26,0 chr2 201342656 . G . PASS END=201342660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 201342661 . T . PASS END=201342661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:53:29:0,53,818:0,53,255:22,0 chr2 201342662 . A . PASS END=201342668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,897:0,70,255:25,0 chr2 201342669 . C . PASS END=201342669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:20:29:0,20,634:0,20,255:21,0 chr2 201342670 . A . PASS END=201342672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:27:0,70,897:0,70,255:24,0 chr2 201342673 . G . PASS END=201342673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:50:28:0,50,708:0,50,255:24,0 chr2 201342674 . T . PASS END=201342676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:26,0 chr2 201342677 . A . PASS END=201342677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,777:0,48,255:24,0 chr2 201342678 . A . PASS END=201342678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 201342679 . T . PASS END=201342679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:11:28:0,11,592:0,11,255:24,0 chr2 201342680 . C . PASS END=201342681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:36:28:0,36,752:0,36,255:25,0 chr2 201342682 . C . PASS END=201342684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,840:0,64,255:26,0 chr2 201342685 . C . PASS END=201342685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201342686 . C . PASS END=201342690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 201342691 . G . PASS END=201342691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,825:0,51,255:24,0 chr2 201342692 . A . PASS END=201342705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,820:0,64,255:26,0 chr2 201342706 . C . PASS END=201342706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 201342707 . A . PASS END=201342710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 201342711 . A . PASS END=201342711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201342712 . T . PASS END=201342713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:26,0 chr2 201342714 . C . PASS END=201342714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,986:0,48,255:25,0 chr2 201342715 . A . PASS END=201342717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,934:0,70,255:25,0 chr2 201342718 . A . PASS END=201342718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,970:0,48,255:25,0 chr2 201342719 . G . PASS END=201342719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,791:0,12,255:22,0 chr2 201342720 . T . PASS END=201342735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,842:0,64,255:26,0 chr2 201342736 . T . PASS END=201342736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,787:0,48,255:25,0 chr2 201342737 . G . PASS END=201342739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 201342740 . A . PASS END=201342740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:25:27:0,25,758:0,25,255:24,0 chr2 201342741 . C . PASS END=201342754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,893:0,62,255:26,0 chr2 201354823 . T . PASS END=201354829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,210:0,18,210:6,0 chr2 201354830 . C . PASS END=201354855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 201354856 . C . PASS END=201354859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:7:0,15,225:0,21,249:6,0 chr2 201354860 . C . PASS END=201354897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 201354898 . G . PASS END=201354903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 201354904 . G . PASS END=201354926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:12,0 chr2 201354927 . A . PASS END=201354927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 201354928 . G . PASS END=201354934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:15,0 chr2 201354935 . C G, 22.94 PASS DP=15;MQ=250.00;MQRankSum=3.001;ReadPosRankSum=0.061;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,5,0:0.333,0.000:15:3,1,0:7,4,0:23:58,0,50,179,342,520:141,0,255:10,0:2.2941e+01,2.2143e-02,5.3022e+01,1.7879e+02,3.7632e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,1,0,5:4,6,4,1 chr2 201354936 . A . PASS END=201354952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,551:0,44,255:20,0 chr2 201354953 . A . PASS END=201354972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:22,0 chr2 201354973 . T . PASS END=201354976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr2 201354977 . A . PASS END=201354977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 201354978 . C . PASS END=201355006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,821:0,69,255:24,0 chr2 201355007 . A . PASS END=201355007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:21,0 chr2 201355008 . G . PASS END=201355021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,939:0,72,255:26,0 chr2 201355022 . G . PASS END=201355153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,994:0,81,255:37,0 chr2 201355154 . C . PASS END=201355154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 201355155 . C . PASS END=201355161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1238:0,94,255:36,0 chr2 201355162 . A . PASS END=201355162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1272:0,72,255:31,0 chr2 201355163 . A . PASS END=201355168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,98,255:31,0 chr2 201355169 . T . PASS END=201355169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1135:0,64,255:29,0 chr2 201355170 . T . PASS END=201355172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1295:0,95,255:32,0 chr2 201355173 . C . PASS END=201355173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:34,0 chr2 201355174 . T . PASS END=201355198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:35:0,98,1303:0,98,255:37,0 chr2 201355199 . G . PASS END=201355199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:37,0 chr2 201355200 . C . PASS END=201355308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:35:0,89,1183:0,89,255:40,0 chr2 201355309 . T . PASS END=201355309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:34,0 chr2 201355310 . T . PASS END=201355337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1238:0,89,255:35,0 chr2 201355338 . G . PASS END=201355338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 201355339 . C . PASS END=201355339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 201357895 . C . PASS END=201357997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,108,1499:0,111,255:40,0 chr2 201362476 . C . PASS END=201362570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:59:0,120,1800:0,161,255:40,1 chr2 201363614 . C . PASS END=201363792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:31:0,84,1260:0,93,255:40,0 chr2 201363793 . G . PASS END=201363793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:24,0 chr2 201363794 . A . PASS END=201363800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,70,255:25,0 chr2 201363801 . T . PASS END=201363802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:18,0 chr2 201363803 . A . PASS END=201363805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 201363806 . G . PASS END=201363806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 201363807 . C . PASS END=201363807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr2 201369471 . C . PASS END=201369471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 201369472 . T . PASS END=201369482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:17,0 chr2 201369483 . T . PASS END=201369483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,599:0,18,255:18,0 chr2 201369484 . A . PASS END=201369503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,670:0,60,255:26,0 chr2 201369504 . T . PASS END=201369521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:32,0 chr2 201369522 . C . PASS END=201369522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr2 201369523 . A . PASS END=201369534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:32:0,89,1127:0,89,255:34,0 chr2 201369535 . A . PASS END=201369535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1195:0,56,255:33,0 chr2 201369536 . G . PASS END=201369670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1395:0,101,255:40,0 chr2 201369671 . T . PASS END=201369671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:31,0 chr2 201369672 . A . PASS END=201369679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,102,255:30,0 chr2 201369680 . C . PASS END=201369682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,96,255:25,0 chr2 201371580 . C . PASS END=201371610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,389:0,36,255:13,0 chr2 201371611 . A . PASS END=201371611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 201371612 . C . PASS END=201371613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 201371614 . G . PASS END=201371615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 201371616 . A . PASS END=201371616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 201371617 . C . PASS END=201371661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:18,0 chr2 201371662 . C . PASS END=201371662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 201371663 . C . PASS END=201371665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 201371666 . G . PASS END=201371666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 201371667 . C . PASS END=201371704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,584:0,45,255:18,0 chr2 201371705 . T . PASS END=201371706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:17:0,38,585:0,38,255:13,0 chr2 201371707 . T . PASS END=201371711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 201371712 . C . PASS END=201371713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:32:16:0,32,565:0,32,255:13,0 chr2 201371714 . T . PASS END=201371719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 201371720 . T . PASS END=201371720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr2 201371721 . C . PASS END=201371730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,511:0,42,255:14,0 chr2 201371731 . G . PASS END=201371733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 201371734 . T . PASS END=201371739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 201396590 . A . PASS END=201396624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,108,1505:0,108,255:40,0 chr2 201397026 . A . LowGQ END=201397030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,20:67:0:65:0,0,1103:0,0,255:40,2 chr2 201397031 . T . PASS END=201397031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,9:73:47:73:0,47,1967:0,47,255:40,1 chr2 201397032 . T . PASS END=201397032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,5:73:99:73:0,120,1800:0,122,255:40,0 chr2 201397033 . C . LowGQ END=201397033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,16:73:0:73:0,0,1574:158,0,255:40,0 chr2 201397034 . A . PASS END=201397034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,8:73:72:73:0,72,2143:0,72,255:40,0 chr2 201397035 . G . LowGQ END=201397035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,16:74:0:74:0,0,1677:154,0,255:40,0 chr2 201397036 . A . PASS END=201397036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,9:74:72:74:0,72,2103:0,72,255:40,0 chr2 201397037 . T . PASS END=201397037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,8:74:89:74:0,89,2201:0,89,255:40,0 chr2 201397038 . G . LowGQ END=201397038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,11:74:0:74:0,0,1939:19,0,255:40,0 chr2 201397039 . G . PASS END=201397039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,7:74:92:74:0,92,2272:0,92,255:40,0 chr2 201397040 . A . PASS END=201397040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,9:75:25:75:0,25,2070:0,25,255:40,0 chr2 201397041 . G . PASS END=201397042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,8:75:34:75:0,34,2196:0,34,255:40,0 chr2 201397043 . C . LowGQ END=201397043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,9:75:0:75:0,0,2186:5,0,255:40,0 chr2 201397044 . A . PASS END=201397045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,5:75:91:75:0,91,2326:0,91,255:40,0 chr2 201397046 . G . PASS END=201397046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,9:75:17:75:0,17,2143:0,17,255:40,0 chr2 201397047 . G . PASS END=201397047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,7:75:95:75:0,95,2327:0,95,255:40,0 chr2 201397048 . A . PASS END=201397048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,9:75:9:75:0,9,2101:0,9,255:40,0 chr2 201397049 . G . PASS END=201397050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,7:76:90:76:0,90,1800:0,90,255:40,0 chr2 201397051 . C . LowGQ END=201397051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,12:76:0:76:0,0,1990:52,0,255:40,0 chr2 201397052 . T . PASS END=201397052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,9:76:79:76:0,79,2261:0,79,255:40,0 chr2 201397053 . T . PASS END=201397056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,3:75:99:75:0,107,1800:0,107,255:40,0 chr2 201397057 . A . PASS END=201397057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,6:75:37:75:0,37,2358:0,37,255:40,0 chr2 201397058 . A . PASS END=201397058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,4:75:99:75:0,120,1800:0,137,255:40,0 chr2 201397059 . G . PASS END=201397059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,8:76:37:76:0,37,2348:0,37,255:40,0 chr2 201397060 . G . PASS END=201397060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,4:78:99:78:0,117,2518:0,117,255:40,0 chr2 201397061 . A . PASS END=201397061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,6:78:54:78:0,54,2423:0,54,255:40,0 chr2 201397062 . A . PASS END=201397063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:78:0,120,1800:0,162,255:40,0 chr2 201397064 . T . PASS END=201397064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,6:78:68:78:0,68,2557:0,68,255:40,0 chr2 201397065 . G . PASS END=201397066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,6:78:90:78:0,90,1800:0,90,255:40,0 chr2 201397067 . A . PASS END=201397067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,7:78:74:78:0,74,2382:0,74,255:40,0 chr2 201397068 . G . PASS END=201397068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,5:78:99:78:0,120,1800:0,137,255:40,0 chr2 201397069 . G . PASS END=201397069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,6:78:54:78:0,54,2438:0,54,255:40,0 chr2 201397070 . C . PASS END=201397072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,3:75:99:75:0,117,1800:0,117,255:40,0 chr2 201397073 . G . PASS END=201397076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,2:75:99:75:0,120,1800:0,159,255:40,0 chr2 201397077 . A . PASS END=201397077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,6:74:72:74:0,72,2281:0,72,255:40,0 chr2 201397078 . G . PASS END=201397078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,196,255:40,0 chr2 201397697 . T . PASS END=201397831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:61:0,120,1800:0,162,255:40,0 chr2 201399719 . A . PASS END=201399894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:43:0,107,1620:0,107,255:40,0 chr2 201400788 . A . PASS END=201400865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:78:0,120,1800:0,190,255:40,0 chr2 201407302 . T . PASS END=201407387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,137,255:40,0 chr2 201434386 . G . PASS END=201434656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:96:38:0,96,1373:0,96,255:40,1 chr2 201435773 . A . PASS END=201435774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1023:0,81,255:27,0 chr2 201435775 . A . PASS END=201435775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 201435776 . G . PASS END=201437176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:83:30:0,83,1111:0,83,255:40,1 chr2 201437177 . A . PASS END=201437213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,168,255:40,0 chr2 201437214 . A G, 50.00 PASS DP=67;MQ=249.19;MQRankSum=6.551;ReadPosRankSum=4.301;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,40,0:0.597,0.000:67:13,15,0:14,25,0:47:85,0,47,1394,920,2314:255,0,255:27,0:5.0000e+01,9.0343e-05,4.9672e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,12,30,10:11,16,17,23 chr2 201437215 . G . PASS END=201437251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:67:0,120,1800:0,185,255:40,0 chr2 201437252 . A . PASS END=201437296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,171,255:40,0 chr2 201437297 . C . PASS END=201437333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,148,255:40,0 chr2 201437334 . T C, 212.52 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,29,0:0,26,0:163:250,166,0,2095,166,2095:255,165,0:0,0:2.1252e+02,1.6252e+02,0.0000e+00,4.5000e+02,1.9729e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,32:0,0,27,28 chr2 201437335 . G . PASS END=201437371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,122,255:40,0 chr2 201437372 . C . PASS END=201438700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:44:0,105,1546:0,111,255:40,1 chr2 201440034 . G . PASS END=201440184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:41:0,99,1485:0,109,255:40,0 chr2 201445258 . A . PASS END=201445261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 201448172 . C . PASS END=201448187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,3:102:99:98:0,120,1800:0,234,255:40,0 chr2 201450832 . A . PASS END=201450843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,646:0,57,255:19,0 chr2 201450844 . T . PASS END=201450844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 201450845 . C . PASS END=201450869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr2 201450870 . C . PASS END=201450873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 201450874 . A . PASS END=201450876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,676:0,43,255:19,0 chr2 201457869 . G . PASS END=201457926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:79:0,120,1800:0,183,255:40,2 chr2 201459995 . T . PASS END=201460066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:42:0,110,1520:0,110,255:40,0 chr2 201460067 . A . PASS END=201460091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:96:45:0,96,1568:0,96,255:40,0 chr2 201462120 . G . PASS END=201462129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,668:0,48,255:18,0 chr2 201462130 . G . PASS END=201462130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 201462131 . C . PASS END=201462131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr2 201462132 . C . PASS END=201462137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 201462138 . C . PASS END=201462138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 201462139 . T . PASS END=201462159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:25,0 chr2 201462160 . C . PASS END=201462193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1086:0,84,255:31,0 chr2 201462194 . T . PASS END=201462202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 201462203 . C . PASS END=201462204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201462205 . C . PASS END=201462224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,939:0,64,255:26,0 chr2 201462225 . T . PASS END=201462225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 201462226 . C . PASS END=201462228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 201464343 . G . PASS END=201464346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:18,0 chr2 201464347 . G . PASS END=201464348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,884:0,66,255:23,0 chr2 201464349 . A . PASS END=201464349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 201464350 . T . PASS END=201464353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr2 201464354 . C . PASS END=201464354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 201464355 . A . PASS END=201464374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,862:0,61,255:26,0 chr2 201464375 . T . PASS END=201464400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1039:0,84,255:35,0 chr2 201464401 . T . PASS END=201464401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 201464402 . G . PASS END=201464452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1141:0,80,255:36,0 chr2 201464453 . A . PASS END=201464469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,884:0,61,255:26,0 chr2 201467007 . G . PASS END=201467068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:58:0,120,1800:0,168,255:40,0 chr2 201467990 . A . PASS END=201468079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:56:0,120,1800:0,149,255:40,0 chr2 201468740 . A . PASS END=201468769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:49:0,120,1800:0,147,255:40,0 chr2 201468770 . T . PASS END=201468820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:58:0,120,1800:0,144,255:40,0 chr2 201469384 . T . PASS END=201469384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 201469419 . A . PASS END=201469542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:46:0,102,1555:0,102,255:40,0 chr2 201469543 . T . PASS END=201469543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:58:45:0,58,1551:0,58,255:37,0 chr2 201469544 . C . PASS END=201469556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:39:0,87,1322:0,87,255:39,0 chr2 201469557 . T . PASS END=201469557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:33,0 chr2 201469558 . C . PASS END=201469562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1203:0,88,255:32,0 chr2 201469563 . G . PASS END=201469563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1099:0,63,255:31,0 chr2 201470259 . G . PASS END=201470284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,1:84:99:79:0,120,1800:0,216,255:40,0 chr2 201470285 . T . PASS END=201470351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:65:0,120,1800:0,185,255:40,0 chr2 201473707 . G . PASS END=201473710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1011:0,81,255:28,0 chr2 201473711 . C . PASS END=201473711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 201473712 . A . PASS END=201473858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:28:0,81,1164:0,84,255:40,0 chr2 201474044 . T . PASS END=201474137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:35:0,93,1395:0,105,255:40,0 chr2 201476107 . A . PASS END=201476216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1663:0,120,255:40,0 chr2 201477332 . T . PASS END=201477494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1191:0,87,255:40,0 chr2 201477495 . C . PASS END=201477498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 201477499 . C . PASS END=201477512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,970:0,81,255:27,0 chr2 201477513 . G . PASS END=201477516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:27:0,66,990:0,81,255:24,0 chr2 201478527 . G . PASS END=201478538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:16,0 chr2 201478539 . A . PASS END=201478539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 201478540 . C . PASS END=201478552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:17,0 chr2 201478553 . T . PASS END=201478554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr2 201478555 . G . PASS END=201478560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 201478561 . A . PASS END=201478561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,527:0,21,255:15,0 chr2 201478562 . G . PASS END=201478562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 201478563 . G . PASS END=201478564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 201478565 . T . PASS END=201478565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,688:0,44,255:19,0 chr2 201478566 . T . PASS END=201478567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 201478568 . T . PASS END=201478569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,660:0,43,255:19,0 chr2 201478570 . C . PASS END=201478579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr2 201478580 . T . PASS END=201478580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 201478581 . C . PASS END=201478591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:21,0 chr2 201478592 . G . PASS END=201478592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 201478593 . C . PASS END=201478613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 201478614 . G . PASS END=201478625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:20:0,44,704:0,44,255:19,0 chr2 201478626 . G . LowGQ END=201478626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:0:22:0,0,684:3,0,255:15,0 chr2 201478627 . A . PASS END=201478656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:18,0 chr2 201478657 . T . PASS END=201478657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 201478658 . A . PASS END=201478669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:17,0 chr2 201478670 . C . PASS END=201478670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 201478671 . A . PASS END=201478683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr2 201478684 . A . PASS END=201478684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 201478685 . A . PASS END=201478689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:17,0 chr2 201480694 . G . PASS END=201480786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,105,1686:0,105,255:40,0 chr2 201485373 . A . PASS END=201485373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 201485374 . A . PASS END=201485413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,768:0,63,255:26,0 chr2 201485414 . C . PASS END=201485414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201485415 . C . PASS END=201485419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 201485420 . C . PASS END=201485424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 201485425 . A . PASS END=201485425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 201485426 . T . PASS END=201485426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201485427 . C . PASS END=201485427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 201485428 . T . PASS END=201485430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 201485431 . C . PASS END=201485498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,901:0,72,255:26,0 chr2 201485499 . T . PASS END=201485499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 201485500 . T . PASS END=201485515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,853:0,75,255:26,0 chr2 201485516 . T . PASS END=201485516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:24,0 chr2 201485517 . A . PASS END=201485525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 201485526 . G . PASS END=201485526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr2 201485527 . C . PASS END=201485532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 201485533 . C . PASS END=201485533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 201485534 . T . PASS END=201485534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:18,0 chr2 201485535 . A . PASS END=201485542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,72,255:19,0 chr2 201485843 . G . PASS END=201485962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:39:0,93,1338:0,103,255:40,0 chr2 201485963 . A . PASS END=201485964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr2 201485965 . A . PASS END=201485967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1260:0,107,255:28,0 chr2 201485968 . A . PASS END=201485969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:40:0,72,1080:0,120,255:24,0 chr2 201488584 . G . PASS END=201488684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1125:0,84,255:40,0 chr2 201488685 . G . PASS END=201488706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,67,255:26,0 chr2 201492076 . G . PASS END=201492172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:60:0,120,1800:0,177,255:40,0 chr2 201499514 . G . PASS END=201499638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:87:42:0,87,1395:0,87,255:40,0 chr2 201501634 . G . PASS END=201501637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 201501638 . T . PASS END=201501642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 201501643 . G . PASS END=201501653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr2 201501654 . G . PASS END=201501659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:30,0 chr2 201501660 . C . PASS END=201501660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 201501661 . C . PASS END=201501754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:30:0,82,1074:0,82,255:40,0 chr2 201501755 . T . PASS END=201501755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 201501756 . T . PASS END=201501757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 201501758 . C . PASS END=201501767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,63,255:25,0 chr2 201502938 . A . PASS END=201502939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,115,1440:0,115,255:40,0 chr2 201502940 . A . PASS END=201502940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:40,0 chr2 201502941 . T . PASS END=201503025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,108,1704:0,108,255:40,0 chr2 201505821 . G . PASS END=201505898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,86,255:40,0 chr2 201505899 . T . PASS END=201505899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:26,0 chr2 201505900 . C . PASS END=201505902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 201505903 . T . PASS END=201505904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr2 201505905 . T . PASS END=201505907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201507333 . G . PASS END=201507339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 201507340 . A . PASS END=201507349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 201507350 . T . PASS END=201507356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 201507357 . A . PASS END=201507394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,559:0,45,255:19,0 chr2 201507395 . G . PASS END=201507395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 201507396 . G . PASS END=201507398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 201507399 . T . PASS END=201507408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 201507409 . G . PASS END=201507433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:25,0 chr2 201507434 . T . PASS END=201507434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr2 201507435 . T . PASS END=201507477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 201507478 . C . PASS END=201507478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 201507479 . T . PASS END=201507482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 201507483 . A . PASS END=201507483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 201507484 . T . PASS END=201507498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:21,0 chr2 201507499 . C . PASS END=201507510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:20:0,44,690:0,44,255:19,0 chr2 201507511 . T . PASS END=201507524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:13:0,36,540:0,39,255:13,0 chr2 201515697 . G . PASS END=201515782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:32:0,96,972:0,96,255:40,0 chr2 201515783 . A . PASS END=201515783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,7:57:41:57:0,41,1672:0,41,255:40,0 chr2 201515784 . G . PASS END=201515901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:37:0,98,1352:0,98,255:40,0 chr2 201515902 . T . PASS END=201515916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:33,0 chr2 201515917 . C . PASS END=201515924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,84,255:23,0 chr2 201521565 . G . PASS END=201521565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 201521566 . C . PASS END=201521568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 201521569 . C . PASS END=201521597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1148:0,80,255:33,0 chr2 201521598 . T . PASS END=201521598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:29,0 chr2 201521599 . C . PASS END=201521649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:32:0,80,1123:0,80,255:36,0 chr2 201521650 . A . PASS END=201521651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:28,0 chr2 201521652 . A . PASS END=201521654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:27,0 chr2 201521655 . A . PASS END=201521660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,946:0,67,255:26,0 chr2 201523736 . A G, 163.93 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,39,0:1.000,0.000:39:0,22,0:0,17,0:114:202,117,0,1483,117,1483:255,117,0:0,0:1.6393e+02,1.1393e+02,0.0000e+00,4.5000e+02,1.4870e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,20:0,0,16,23 chr2 201523888 . G . PASS END=201524016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:35:0,84,1365:0,84,255:40,0 chr2 201524718 . G . PASS END=201524792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,144,255:40,0 chr2 201526302 . G . PASS END=201526353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:30:0,86,1111:0,86,255:37,0 chr2 201526354 . G . PASS END=201526354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 201527578 . A . PASS END=201527689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:27:0,81,968:0,81,255:39,0 chr2 201527690 . A . PASS END=201527692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:31:0,66,990:0,77,255:23,0 chr2 201531410 . A . PASS END=201531475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:52:0,120,1800:0,156,255:40,0 chr2 201533338 . A . PASS END=201533374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,709:0,60,255:26,0 chr2 201533375 . C . PASS END=201533388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1124:0,87,255:32,0 chr2 201533389 . A . PASS END=201533389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr2 201533390 . A . PASS END=201533526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:83:33:0,83,1194:0,83,255:40,0 chr2 201534298 . G . PASS END=201534424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:83:30:0,83,1156:0,83,255:40,0 chr2 201534425 . A . PASS END=201534433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,73,255:26,0 chr2 201534434 . G . PASS END=201534461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 201534462 . A . PASS END=201534462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 201534463 . A . PASS END=201534465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 201535352 . A . PASS END=201535402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:39:0,96,1442:0,96,255:40,0 chr2 201541601 . G . PASS END=201541687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,105,1620:0,105,255:40,0 chr2 201677031 . A . PASS END=201677032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 201677131 . A . PASS END=201677131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 201677132 . T . PASS END=201677132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 201677133 . G . PASS END=201677144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr2 201677145 . T . PASS END=201677145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 201677146 . G . PASS END=201677160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,429:0,39,255:13,0 chr2 201677161 . A . PASS END=201677161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,433:0,25,255:12,0 chr2 201677162 . G . PASS END=201677162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 201677163 . C . PASS END=201677163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 201677164 . G . PASS END=201677174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 201677175 . T . LowGQ END=201677175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,290:23,0,255:10,0 chr2 201677176 . G . PASS END=201677207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 201677208 . G . PASS END=201677215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 201677216 . G . PASS END=201677216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 201677607 . A . PASS END=201677608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:98:43:0,98,1444:0,98,255:38,0 chr2 201677931 . G . PASS END=201678004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:61:0,120,1800:0,153,255:40,0 chr2 201680064 . A . PASS END=201680074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,917:0,65,255:26,0 chr2 201680075 . A . PASS END=201680075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,864:0,47,255:25,0 chr2 201680076 . G . PASS END=201680084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1108:0,87,255:36,0 chr2 201680085 . C . PASS END=201680085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:35,0 chr2 201680086 . T . PASS END=201680246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:98:38:0,98,1418:0,98,255:40,0 chr2 201680390 . C . PASS END=201680485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:39:0,105,1416:0,115,255:40,0 chr2 201681048 . G . PASS END=201681113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:90:0,120,1800:0,235,255:40,0 chr2 201681829 . C . PASS END=201681964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:36:0,87,1343:0,87,255:40,0 chr2 201682697 . G . PASS END=201682719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1141:0,84,255:32,0 chr2 201682720 . A . PASS END=201682720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:31,0 chr2 201682721 . A . PASS END=201682766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1103:0,83,255:33,0 chr2 201682767 . T . PASS END=201682778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:25,0 chr2 201682779 . G . PASS END=201682788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 201682789 . A . PASS END=201682806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:26:0,66,990:0,68,255:26,0 chr2 201682946 . G . PASS END=201683010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:30:0,81,1135:0,82,255:33,0 chr2 201683011 . G . PASS END=201683011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:27,0 chr2 201683012 . A . PASS END=201683024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1025:0,87,255:29,0 chr2 201683025 . A . PASS END=201683025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:26,0 chr2 201683026 . A . PASS END=201683026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201683027 . T . PASS END=201683051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,939:0,64,255:26,0 chr2 201683052 . G . PASS END=201683052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 201683053 . A . PASS END=201683104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,776:0,62,255:26,0 chr2 201683105 . C . PASS END=201683116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:18:0,47,720:0,47,255:18,0 chr2 201683478 . A . PASS END=201683478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr2 201683479 . T . PASS END=201683523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:31:0,87,1164:0,93,255:40,0 chr2 201683524 . A . PASS END=201683524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1270:0,57,255:33,0 chr2 201683525 . G . PASS END=201683539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:90:41:0,90,1344:0,90,255:40,0 chr2 201683540 . A . PASS END=201683540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,5:47:58:47:0,58,1508:0,58,255:40,0 chr2 201683541 . A . PASS END=201683623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1242:0,81,255:40,0 chr2 201683624 . G . PASS END=201683624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:78:33:0,78,1170:0,83,255:25,0 chr2 201684705 . C . PASS END=201684713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:19,0 chr2 201684714 . C . PASS END=201684724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 201684725 . T . PASS END=201684725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 201684726 . G . PASS END=201684729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 201684730 . T . PASS END=201684730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,759:0,27,255:20,0 chr2 201684731 . T . PASS END=201684736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:24,0 chr2 201684737 . T . PASS END=201684737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,808:0,41,255:23,0 chr2 201684738 . C . PASS END=201684744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,886:0,72,255:26,0 chr2 201684745 . A . PASS END=201684753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:31,0 chr2 201684754 . T . PASS END=201684754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:30,0 chr2 201684755 . G . PASS END=201684759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1180:0,93,255:31,0 chr2 201684760 . T . PASS END=201684760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 201684761 . G . PASS END=201684800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1027:0,86,255:33,0 chr2 201684801 . T . PASS END=201684843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:26,0 chr2 201685906 . C . PASS END=201685910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 201685911 . G . PASS END=201685927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,976:0,81,255:30,0 chr2 201685928 . C . PASS END=201685928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:30,0 chr2 201685929 . A . PASS END=201685948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1161:0,80,255:40,0 chr2 201685949 . T . PASS END=201685949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1543:0,74,255:40,0 chr2 201685950 . G . PASS END=201685997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:41:0,83,1530:0,83,255:40,0 chr2 201685998 . T . PASS END=201685998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1226:0,65,255:30,0 chr2 201685999 . T . PASS END=201686028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1197:0,83,255:33,0 chr2 201686870 . A . PASS END=201686901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:73:0,120,1800:0,164,255:40,0 chr2 201718029 . C . PASS END=201718172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:53:0,120,1800:0,123,255:40,0 chr2 201718626 . C . PASS END=201718716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:38:0,101,1380:0,101,255:40,0 chr2 201719339 . C . PASS END=201719418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:57:0,120,1800:0,155,255:40,2 chr2 201719727 . T . PASS END=201719809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:93:48:0,93,1395:0,135,255:40,0 chr2 201721405 . C . PASS END=201721534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:90:39:0,90,1367:0,90,255:40,0 chr2 201721614 . T . PASS END=201721618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:60:0,120,1800:0,152,255:40,0 chr2 201721619 . T . PASS END=201721708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:50:0,120,1800:0,126,255:40,0 chr2 201722441 . A . PASS END=201722607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:40:0,110,1466:0,110,255:40,0 chr2 201722696 . A . PASS END=201722829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:63:0,120,1800:0,158,255:40,0 chr2 201724403 . G . PASS END=201724470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:67:0,120,1800:0,161,255:40,0 chr2 201724848 . A . PASS END=201724848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr2 201724849 . T . PASS END=201724849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:33,0 chr2 201724850 . C . PASS END=201724938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:95:34:0,95,1250:0,95,255:40,0 chr2 201725961 . C . PASS END=201725967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,923:0,64,255:26,0 chr2 201725968 . G . PASS END=201725982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,875:0,81,255:36,0 chr2 201725983 . G . PASS END=201725983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:38,0 chr2 201725984 . T . PASS END=201726189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:93:39:0,93,1418:0,93,255:40,0 chr2 201726425 . C . PASS END=201726583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:33:0,93,1395:0,99,255:40,0 chr2 201726584 . A . PASS END=201726584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:31,0 chr2 201726585 . T . PASS END=201726585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1216:0,83,255:31,0 chr2 201728824 . T . PASS END=201728847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:13,0 chr2 201728848 . G . PASS END=201728854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 201728855 . T . PASS END=201728855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 201728856 . C . PASS END=201728863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr2 201728864 . T . PASS END=201728894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 201728895 . G . PASS END=201728895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 201728896 . G . PASS END=201728905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 201728906 . C . PASS END=201728910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 201728911 . C . PASS END=201728911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr2 201728912 . G . PASS END=201728942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr2 201728943 . C . PASS END=201728943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 201728944 . C . PASS END=201728947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 201728948 . A . PASS END=201728949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,585:0,38,255:13,0 chr2 201736118 . C . PASS END=201736244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,117,1755:0,142,255:40,0 chr2 201741642 . T . PASS END=201741760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:46:0,120,1800:0,138,255:40,0 chr2 201746144 . C . PASS END=201746211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:60:0,120,1800:0,176,255:40,0 chr2 201747065 . C . PASS END=201747158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,168,255:40,0 chr2 201749985 . T . PASS END=201750027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,520:0,42,255:19,0 chr2 201750028 . A . PASS END=201750051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,809:0,66,255:24,0 chr2 201750052 . C . PASS END=201750052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 201750053 . C . PASS END=201750071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:23,0 chr2 201750072 . G . PASS END=201750090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:18:0,47,626:0,47,255:18,0 chr2 201750421 . C . PASS END=201750495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:60:0,120,1800:0,169,255:40,0 chr2 201752336 . C . PASS END=201752338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 201753679 . T . PASS END=201753738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,102,1575:0,102,255:40,0 chr2 201756667 . A . PASS END=201756667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,976:0,78,255:26,0 chr2 201756668 . T . PASS END=201756668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:24,0 chr2 201756669 . G . PASS END=201756672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr2 201756673 . T . PASS END=201756673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 201756674 . C . PASS END=201756675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1021:0,87,255:30,0 chr2 201756676 . T . PASS END=201756676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 201756677 . C . PASS END=201756681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1139:0,90,255:33,0 chr2 201756682 . G . PASS END=201756682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr2 201756683 . T . PASS END=201756854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:33:0,81,1215:0,92,255:40,0 chr2 201756855 . T . PASS END=201756867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,73,255:26,0 chr2 201756868 . T . PASS END=201756870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 201756871 . C . PASS END=201756899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,953:0,65,255:26,0 chr2 201756900 . G . PASS END=201757044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:27:0,80,1024:0,80,255:36,0 chr2 201757045 . C . PASS END=201757045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1219:0,56,255:31,0 chr2 201757046 . A . PASS END=201757046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 201757047 . T . PASS END=201757048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1180:0,61,255:30,0 chr2 201757049 . C . PASS END=201757049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1205:0,56,255:24,0 chr2 201757050 . A . PASS END=201757052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:36:0,75,1125:0,77,255:26,0 chr2 201757053 . C . PASS END=201757056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:37:0,81,1215:0,94,255:27,0 chr2 201757057 . G . PASS END=201757057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:27,0 chr2 201757058 . A . PASS END=201757059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:36:0,84,1260:0,91,255:28,0 chr2 201757060 . G . PASS END=201757060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,964:0,56,255:27,0 chr2 201757061 . C . PASS END=201757061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 201757062 . T . PASS END=201757062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:23,0 chr2 201757063 . G . PASS END=201757077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:24,0 chr2 201757078 . A . PASS END=201757078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 201757079 . A . PASS END=201757080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 201757081 . A . PASS END=201757081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 201757082 . A . PASS END=201757087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,65,255:21,0 chr2 201757088 . T . PASS END=201757102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:18:0,46,706:0,46,255:19,0 chr2 201757969 . G . PASS END=201758113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:89:32:0,89,1218:0,89,255:40,0 chr2 201758114 . C . PASS END=201758114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:27,0 chr2 201758115 . A . PASS END=201758119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,91,255:29,0 chr2 201758120 . T . PASS END=201758120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1180:0,75,255:28,0 chr2 201758121 . T . PASS END=201758131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,99,255:30,0 chr2 201759987 . G . PASS END=201760113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,2:69:92:36:0,92,1310:0,92,255:40,0 chr2 201761797 . A . PASS END=201761797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:31,0 chr2 201761798 . G . PASS END=201761809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:35,0 chr2 201761810 . A . PASS END=201761916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:36:0,84,1260:0,92,255:40,0 chr2 201761917 . T . PASS END=201761925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:60:33:0,60,1080:0,60,255:26,0 chr2 201761926 . G . PASS END=201761927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:32:0,44,1116:0,44,255:26,0 chr2 201761928 . A . PASS END=201761929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 201761930 . A . PASS END=201761930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,935:0,56,255:26,0 chr2 201761931 . A . PASS END=201761937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,933:0,78,255:26,0 chr2 201764108 . A . PASS END=201764108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,831:0,44,255:24,0 chr2 201764109 . G . PASS END=201764110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 201764111 . C . PASS END=201764112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 201764113 . C . PASS END=201764127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:26,0 chr2 201764128 . G . PASS END=201764128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 201764129 . C . PASS END=201764129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr2 201764130 . C . PASS END=201764149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1041:0,87,255:31,0 chr2 201764150 . G . PASS END=201764150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 201764151 . C . PASS END=201764151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 201764152 . A . PASS END=201764152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 201764153 . G . PASS END=201764157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 201764158 . C . PASS END=201764174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:24:0,64,894:0,64,255:26,0 chr2 201764175 . T . PASS END=201764175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 201764176 . G . PASS END=201764181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 201764182 . T . PASS END=201764182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:18,0 chr2 201764183 . A . PASS END=201764190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 201764191 . G . PASS END=201764191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr2 201768217 . G . PASS END=201768223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,809:0,72,255:24,0 chr2 201768224 . G . PASS END=201768467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:83:28:0,83,1023:0,83,255:40,0 chr2 201776024 . T . PASS END=201776110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:59:0,120,1800:0,140,255:40,0 chr2 201778018 . C . PASS END=201778052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1011:0,84,255:39,0 chr2 201778053 . C . PASS END=201778053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1365:0,65,255:37,0 chr2 201778054 . A . PASS END=201778067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,104,1367:0,104,255:40,0 chr2 201778068 . G . PASS END=201778068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1404:0,79,255:40,0 chr2 201778069 . G . PASS END=201778124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:88:34:0,88,1288:0,88,255:40,0 chr2 201778125 . G . PASS END=201778125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:33,0 chr2 201778126 . A . PASS END=201778130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1241:0,86,255:33,0 chr2 201778131 . A . PASS END=201778131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1042:0,71,255:31,0 chr2 201778132 . A . PASS END=201778136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:33,0 chr2 201778654 . C . PASS END=201778666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,168,255:40,0 chr2 201778667 . G . PASS END=201778715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:93:72:0,93,1395:0,194,255:40,0 chr2 201784945 . C . PASS END=201785096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:32:0,87,1305:0,96,255:40,0 chr2 201785097 . C . PASS END=201785109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,78,255:26,0 chr2 201785110 . T . PASS END=201785110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 201785111 . C . PASS END=201785111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 201785112 . C . PASS END=201785116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:18,0 chr2 201785716 . T . PASS END=201785862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:29:0,84,1108:0,87,255:40,0 chr2 201790559 . C . PASS END=201790655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:45:0,87,1598:0,87,255:40,0 chr2 201791491 . T . PASS END=201791623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:87:42:0,87,1458:0,87,255:40,0 chr2 201796062 . T . PASS END=201796171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:62:0,120,1800:0,140,255:40,0 chr2 201798599 . C . PASS END=201798697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:64:0,120,1800:0,176,255:40,0 chr2 201800422 . T . PASS END=201800603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:34:0,84,1260:0,97,255:40,0 chr2 201800604 . G . PASS END=201800607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:26,0 chr2 201800608 . C . PASS END=201800615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:51:28:0,51,765:0,84,255:19,0 chr2 201802629 . C . PASS END=201802689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:83:0,120,1800:0,202,255:40,0 chr2 201805971 . C . PASS END=201806002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,130,255:40,0 chr2 201807408 . C . PASS END=201807500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,179,255:40,0 chr2 201807811 . C . PASS END=201807870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:58:0,120,1800:0,173,255:40,0 chr2 201814277 . C . PASS END=201814366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,151,255:40,0 chr2 201822124 . C . PASS END=201822267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,117,1755:0,133,255:40,0 chr2 201822753 . C . PASS END=201822846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,110,1800:0,110,255:40,0 chr2 201845993 . C . PASS END=201846412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:83:31:0,83,1186:0,83,255:40,0 chr2 201846413 . A . PASS END=201846413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,0 chr2 201846414 . G . PASS END=201846431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1164:0,83,255:30,0 chr2 201846432 . T . PASS END=201846432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 201846433 . T . PASS END=201846454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr2 201846455 . T . PASS END=201846481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,876:0,61,255:26,0 chr2 201846482 . G . PASS END=201846483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 201846484 . A . PASS END=201846484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 201846485 . G . PASS END=201846486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 201846487 . A . PASS END=201846535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,861:0,69,255:26,0 chr2 201846536 . T . PASS END=201846536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr2 201846537 . C . PASS END=201846548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 201846549 . T . PASS END=201846549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:21,0 chr2 201846550 . C . PASS END=201846557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:23,0 chr2 201846558 . T . PASS END=201846558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,760:0,55,255:23,0 chr2 201846559 . T . PASS END=201846562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 201846563 . A . PASS END=201846563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 201846564 . G . PASS END=201846564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 201846565 . A . PASS END=201846587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,765:0,54,255:19,0 chr2 201846588 . T . PASS END=201846588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 201846589 . C . PASS END=201846594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,597:0,51,255:17,0 chr2 201852088 . C . PASS END=201852088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,930:0,62,255:23,0 chr2 201852089 . C . PASS END=201852089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 201852090 . T . PASS END=201852092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 201852093 . G . PASS END=201852234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:29:0,80,1166:0,80,255:40,0 chr2 201852235 . C . PASS END=201852236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 201852237 . T . PASS END=201852241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 201852242 . G . PASS END=201852242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 201852243 . A . PASS END=201852243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:25,0 chr2 201852244 . A . PASS END=201852253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr2 201852254 . A . PASS END=201852254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,861:0,31,255:23,0 chr2 201852255 . T . PASS END=201852255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 201852985 . C . PASS END=201853144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:33:0,84,1233:0,86,255:40,0 chr2 201857004 . C . PASS END=201857091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,105,1575:0,115,255:40,0 chr2 201857610 . A . PASS END=201857726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:39:0,117,1496:0,117,255:40,0 chr2 201862168 . C . PASS END=201862263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:34:0,89,1263:0,89,255:40,0 chr2 201873696 . C . PASS END=201873811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:95:43:0,95,1646:0,95,255:40,0 chr2 201876115 . T . PASS END=201876195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:57:0,120,1800:0,141,255:40,0 chr2 201881714 . C . PASS END=201881869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:36:0,90,1258:0,91,255:40,0 chr2 201881870 . C . PASS END=201881870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:29,0 chr2 201881871 . T . PASS END=201881879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,92,255:30,0 chr2 201881880 . A . PASS END=201881881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:31:0,72,1080:0,77,255:25,0 chr2 201881882 . A . PASS END=201881882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,962:0,57,255:22,0 chr2 201881883 . G . PASS END=201881893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,71,255:24,0 chr2 201886782 . C . PASS END=201886782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 201886783 . T . PASS END=201886783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:30,0 chr2 201886784 . G . PASS END=201886788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1193:0,86,255:33,0 chr2 201886789 . T . PASS END=201886789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1119:0,69,255:31,0 chr2 201886790 . C . PASS END=201886819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1155:0,80,255:34,0 chr2 201886820 . C . PASS END=201886822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:72:31:0,72,1080:0,79,255:25,0 chr2 201886823 . T . PASS END=201886823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:23,0 chr2 201886824 . C . PASS END=201886828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr2 201886829 . A . PASS END=201886833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,1002:0,80,255:27,0 chr2 201886834 . G . PASS END=201886834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 201886835 . T . PASS END=201886837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,875:0,81,255:27,0 chr2 201887554 . C . PASS END=201887655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:48:0,108,1620:0,127,255:40,0 chr2 201888682 . C . PASS END=201888732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:79:0,120,1800:0,202,255:40,0 chr2 201943606 . A . PASS END=201943606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 201943607 . T . PASS END=201943607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 201943608 . G . PASS END=201943610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr2 201943611 . C . PASS END=201943611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 201943612 . C . PASS END=201943614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:30,0 chr2 201943615 . G . PASS END=201943615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 201943616 . A . PASS END=201943745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:31:0,90,1127:0,92,255:40,0 chr2 201950182 . C . PASS END=201950182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1235:0,59,255:36,0 chr2 201950183 . A . PASS END=201950184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1302:0,81,255:37,0 chr2 201950185 . T . PASS END=201950186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,5:39:31:39:0,31,1175:0,31,255:36,0 chr2 201950187 . A . PASS END=201950188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:39:0,84,1317:0,84,255:37,0 chr2 201950189 . G . PASS END=201950189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:36:39:0,36,1148:0,36,255:35,0 chr2 201950190 . C . PASS END=201950190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1344:0,100,255:37,0 chr2 201950191 . T . PASS END=201950191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1292:0,68,255:36,0 chr2 201950192 . T . PASS END=201950192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 201950193 . G . PASS END=201950193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:67:39:0,67,1286:0,67,255:36,0 chr2 201950194 . G . PASS END=201950195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1345:0,90,255:39,0 chr2 201950196 . G . PASS END=201950196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1363:0,73,255:38,0 chr2 201950197 . A . PASS END=201950197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:56:43:0,56,1119:0,56,255:39,0 chr2 201950198 . T . PASS END=201950198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:37:43:0,37,1390:0,37,255:40,0 chr2 201950199 . A . PASS END=201950201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:96:43:0,96,1375:0,96,255:40,0 chr2 201950202 . T . PASS END=201950202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1370:0,63,255:40,0 chr2 201950203 . G . PASS END=201950206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:94:46:0,94,1556:0,94,255:40,0 chr2 201950207 . G . PASS END=201950207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1615:0,72,255:40,0 chr2 201950208 . G . PASS END=201950209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:94:50:0,94,1597:0,94,255:40,0 chr2 201950210 . T . PASS END=201950332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:29:0,81,1215:0,87,255:40,0 chr2 201950333 . C . PASS END=201950337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,67,255:26,0 chr2 201950338 . A . PASS END=201950338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 201994589 . A . PASS END=201994827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:80:31:0,80,1140:0,80,255:40,0 chr2 201994828 . G . PASS END=201994834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1062:0,74,255:26,0 chr2 201994835 . C . PASS END=201994845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,71,255:19,0 chr2 201994846 . C . PASS END=201994852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 201994853 . C . PASS END=201994853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 201994854 . T . PASS END=201994855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 201994856 . G . PASS END=201994856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,735:0,36,255:19,0 chr2 201994857 . T . PASS END=201994857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 201994858 . T . PASS END=201994858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 201994859 . T . LowGQ END=201994859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,636:45,0,255:18,0 chr2 201994860 . C . PASS END=201994860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,712:0,22,255:16,0 chr2 201994861 . G . PASS END=201994861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 201994862 . G . PASS END=201994862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,734:0,22,255:15,0 chr2 201994863 . A . PASS END=201994863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 201994864 . C . LowGQ END=201994864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:23:0,0,604:42,0,255:12,0 chr2 201994865 . T . PASS END=201994866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,645:0,33,255:14,0 chr2 201994867 . T . PASS END=201994867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:22:0,48,720:0,49,255:15,0 chr2 201994868 . A . LowGQ END=201994868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,535:1,0,255:12,0 chr2 201994869 . G . PASS END=201994869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 201997752 . A . PASS END=201997857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:31:0,93,1170:0,93,255:40,0 chr2 202000695 . A . PASS END=202000823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:29:0,83,941:0,83,255:40,0 chr2 202000824 . C . PASS END=202000830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 202000921 . G . PASS END=202000932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:26,0 chr2 202000933 . G . PASS END=202000941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1033:0,84,255:31,0 chr2 202000942 . T . PASS END=202000942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:30,0 chr2 202000943 . G . PASS END=202001145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1158:0,92,255:40,0 chr2 202001146 . G . PASS END=202001150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:25,0 chr2 202005080 . T . PASS END=202005198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:60:0,120,1800:0,164,255:40,0 chr2 202006097 . A . PASS END=202006156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:58:0,120,1800:0,155,255:40,0 chr2 202010101 . C . PASS END=202010155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,144,255:40,0 chr2 202013725 . G . PASS END=202013775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:87:0,120,1800:0,223,255:40,0 chr2 202014477 . A . PASS END=202014558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:38:0,81,1323:0,81,255:40,0 chr2 202025155 . A . PASS END=202025167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 202025168 . C . PASS END=202025168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 202025169 . A . PASS END=202025171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,817:0,69,255:25,0 chr2 202025172 . T . PASS END=202025173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 202025174 . C . PASS END=202025181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,925:0,65,255:26,0 chr2 202025182 . T . PASS END=202025186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1155:0,84,255:30,0 chr2 202025187 . T . PASS END=202025187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 202025188 . A . PASS END=202025195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1083:0,90,255:30,0 chr2 202025196 . C . PASS END=202025196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 202025197 . A . PASS END=202025197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 202025198 . G . PASS END=202025198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 202025199 . A . PASS END=202025202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1080:0,90,255:30,0 chr2 202025203 . T . PASS END=202025203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr2 202025204 . C . PASS END=202025204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202025205 . T . PASS END=202025216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,79,255:26,0 chr2 202025217 . A . PASS END=202025217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:22,0 chr2 202025218 . T . PASS END=202025228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,953:0,65,255:25,0 chr2 202025229 . T . PASS END=202025229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr2 202025230 . C . PASS END=202025233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:24,0 chr2 202025234 . G . PASS END=202025234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 202025235 . A . PASS END=202025235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 202025236 . T . PASS END=202025237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,806:0,42,255:23,0 chr2 202025238 . C . PASS END=202025239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 202025240 . T . PASS END=202025240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:23,0 chr2 202025241 . G . PASS END=202025252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 202025253 . T . PASS END=202025253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 202025254 . G . PASS END=202025256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 202025257 . T . PASS END=202025266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,66,255:19,0 chr2 202025267 . C . PASS END=202025267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,693:0,27,255:17,0 chr2 202025268 . C . PASS END=202025282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr2 202025283 . T . PASS END=202025283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,483:0,37,255:16,0 chr2 202025284 . T . PASS END=202025313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,675:0,41,255:19,0 chr2 202025314 . C . PASS END=202025315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 202025316 . C . PASS END=202025319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 202025320 . G . PASS END=202025320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 202025321 . T . PASS END=202025321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 202025322 . G . PASS END=202025361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,939:0,64,255:26,0 chr2 202025362 . A . PASS END=202025367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:29,0 chr2 202025368 . T . PASS END=202025368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 202025369 . C . PASS END=202025373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 202025374 . G . PASS END=202025374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 202025375 . G . PASS END=202025381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1102:0,87,255:30,0 chr2 202025382 . A . PASS END=202025382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1059:0,60,255:28,0 chr2 202025383 . T . PASS END=202025497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1082:0,90,255:36,0 chr2 202025498 . G . PASS END=202025501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1162:0,60,255:32,0 chr2 202025502 . A . PASS END=202025503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 202025504 . G . PASS END=202025511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1125:0,60,255:31,0 chr2 202025512 . A . PASS END=202025513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1263:0,86,255:31,0 chr2 202025514 . T . PASS END=202025514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1118:0,66,255:31,0 chr2 202025515 . T . PASS END=202025515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 202025516 . C . PASS END=202025517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:30,0 chr2 202025518 . A . PASS END=202025518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 202025519 . G . PASS END=202025519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1155:0,47,255:29,0 chr2 202025520 . G . PASS END=202025527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1178:0,63,255:33,0 chr2 202025528 . G . PASS END=202025528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 202025529 . C . PASS END=202025529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1213:0,66,255:32,0 chr2 202025530 . G . PASS END=202025530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 202025531 . A . PASS END=202025533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 202025534 . G . PASS END=202025534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,102,1530:0,117,255:34,0 chr2 202025535 . C . PASS END=202025538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:33,0 chr2 202025539 . G . PASS END=202025540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,99,1485:0,114,255:33,0 chr2 202025541 . A . PASS END=202025541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:32,0 chr2 202025542 . C . PASS END=202025544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1440:0,108,255:33,0 chr2 202025545 . T . PASS END=202025545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1221:0,72,255:33,0 chr2 202025546 . T . PASS END=202025546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 202025547 . C . PASS END=202025547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 202025548 . A . PASS END=202025548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 202025549 . C . PASS END=202025549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:35,0 chr2 202025550 . C . PASS END=202025550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 202025551 . G . PASS END=202025553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:35,0 chr2 202025554 . A . PASS END=202025554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:35,0 chr2 202025555 . A . PASS END=202025559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:75:38:0,75,1305:0,75,255:36,0 chr2 202025560 . A . PASS END=202025560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 202025561 . C . PASS END=202025561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:36,0 chr2 202025562 . T . PASS END=202025562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 202025563 . T . PASS END=202025563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1309:0,75,255:36,0 chr2 202025564 . C . PASS END=202025662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1125:0,80,255:39,0 chr2 202025663 . A . PASS END=202025666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 202027216 . C . PASS END=202027225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:33:0,99,1199:0,99,255:37,0 chr2 202027226 . G . PASS END=202027226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1266:0,59,255:36,0 chr2 202027227 . C . PASS END=202027251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:97:37:0,97,1297:0,97,255:40,0 chr2 202027252 . C . PASS END=202027252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1390:0,76,255:37,0 chr2 202027253 . A . PASS END=202027280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,107,1466:0,107,255:40,0 chr2 202027719 . G . PASS END=202027803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:40:0,105,1659:0,105,255:40,0 chr2 202028558 . A . PASS END=202028567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr2 202028568 . C . PASS END=202028696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:32:0,88,1130:0,88,255:40,0 chr2 202047725 . G . PASS END=202047725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 202048036 . G . PASS END=202048036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 202050501 . A . PASS END=202050505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,898:0,62,255:26,0 chr2 202050506 . A . PASS END=202050511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 202050512 . A . PASS END=202050512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,917:0,45,255:27,0 chr2 202050513 . G . PASS END=202050513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 202050514 . G . PASS END=202050515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 202050516 . C . PASS END=202050517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 202050518 . A . PASS END=202050518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,887:0,67,255:27,0 chr2 202050519 . C . PASS END=202050521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:29,0 chr2 202050522 . T . PASS END=202050524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:28,0 chr2 202050525 . T . PASS END=202050526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 202050527 . T . PASS END=202050527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 202050528 . T . PASS END=202050532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1011:0,87,255:29,0 chr2 202050533 . T . PASS END=202050533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr2 202050534 . T . PASS END=202050535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 202050536 . A . PASS END=202050536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 202050537 . G . PASS END=202050537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 202050538 . A . PASS END=202050542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:29:0,74,1039:0,74,255:26,0 chr2 202050543 . A . PASS END=202050545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202050546 . T . PASS END=202050546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 202050547 . G . PASS END=202050547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202050548 . T . PASS END=202050548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:25,0 chr2 202050549 . A . PASS END=202050549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202050550 . A . PASS END=202050550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 202050551 . A . PASS END=202050555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,918:0,81,255:28,0 chr2 202050556 . G . PASS END=202050557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 202050558 . T . PASS END=202050564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1009:0,84,255:30,0 chr2 202050565 . A . PASS END=202050565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:29,0 chr2 202050566 . G . PASS END=202050580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,878:0,89,255:31,0 chr2 202050581 . T . PASS END=202050585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 202050586 . C . PASS END=202050586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202050587 . A . PASS END=202050591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,1080:0,73,255:26,0 chr2 202050592 . T . PASS END=202050592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,913:0,51,255:23,0 chr2 202050593 . G . PASS END=202050611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,65,255:25,0 chr2 202050612 . A . PASS END=202050613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 202050614 . C . PASS END=202050625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,746:0,63,255:21,0 chr2 202050626 . C . PASS END=202050659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,53,255:18,0 chr2 202050660 . A . PASS END=202050661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,57,255:13,0 chr2 202050662 . G . PASS END=202050670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:14,0 chr2 202050671 . A . PASS END=202050691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,450:0,39,255:13,0 chr2 202050692 . T . PASS END=202050700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,637:0,48,255:18,0 chr2 202050701 . A . PASS END=202050701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 202050702 . G . PASS END=202050710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr2 202050711 . C . PASS END=202050720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 202050721 . A . PASS END=202050721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 202050722 . A . PASS END=202050745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,828:0,72,255:25,0 chr2 202050746 . C . PASS END=202050746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202050747 . C . PASS END=202050747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 202050748 . T . PASS END=202050752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 202050753 . A . PASS END=202050753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 202050754 . T . PASS END=202050772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1019:0,84,255:29,0 chr2 202050773 . G . PASS END=202050773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 202050774 . C . PASS END=202050781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 202050782 . C . PASS END=202050782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 202050783 . C . PASS END=202050783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202050784 . T . PASS END=202050784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 202050785 . C . PASS END=202050788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202050789 . T . PASS END=202050789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr2 202050790 . G . PASS END=202050796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 202050797 . A . PASS END=202050799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:27,0 chr2 202050800 . G . PASS END=202050800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202050801 . G . PASS END=202050801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,998:0,54,255:25,0 chr2 202050802 . A . PASS END=202050805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202050806 . G . PASS END=202050806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 202050807 . G . PASS END=202050808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202050809 . G . PASS END=202050809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:26,0 chr2 202050810 . C . PASS END=202050820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 202050821 . C . PASS END=202050837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr2 202050838 . C . PASS END=202050838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr2 202050839 . T . PASS END=202050839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 202050840 . C . PASS END=202050847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:45:21:0,45,675:0,49,255:18,0 chr2 202052429 . A . PASS END=202052522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:59:0,120,1800:0,160,255:40,0 chr2 202057693 . T . PASS END=202057693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1296:0,105,255:35,0 chr2 202057707 . A . PASS END=202057842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:40:0,82,1210:0,82,255:40,0 chr2 202057845 . A . PASS END=202057845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:96:41:0,96,1440:0,107,255:31,0 chr2 202060565 . C . PASS END=202060671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:97:34:0,97,1288:0,97,255:40,0 chr2 202065166 . G . PASS END=202065225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:96:40:0,96,1304:0,109,255:40,0 chr2 202068453 . C . PASS END=202068489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,3:72:99:69:0,120,1800:0,166,255:40,0 chr2 202070605 . G . PASS END=202070696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:38:0,90,1261:0,97,255:40,0 chr2 202072798 . A . PASS END=202072798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,639:0,57,255:19,0 chr2 202072799 . G . PASS END=202072806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:26,0 chr2 202072807 . G . PASS END=202072812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,978:0,81,255:30,0 chr2 202072813 . A . PASS END=202072813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 202072814 . G . PASS END=202072897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1066:0,82,255:37,0 chr2 202072898 . A . PASS END=202072898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:26,0 chr2 202072899 . A . PASS END=202072900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1117:0,80,255:28,0 chr2 202072901 . A . PASS END=202072901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 202072902 . T . PASS END=202072904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 202072905 . T . PASS END=202072906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 202073793 . A . PASS END=202073793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,476:0,42,255:14,0 chr2 202073794 . G . PASS END=202073794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,413:0,11,255:13,0 chr2 202073795 . A . PASS END=202073797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,492:0,45,255:15,0 chr2 202073798 . C . PASS END=202073798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 202073799 . T . PASS END=202073799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 202073800 . G . PASS END=202073800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 202073801 . A . PASS END=202073802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr2 202073803 . T . PASS END=202073803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 202073804 . C . PASS END=202073810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,568:0,48,255:17,0 chr2 202073811 . T . PASS END=202073811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 202073812 . C . PASS END=202073812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 202073813 . C . PASS END=202073813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 202073814 . A . PASS END=202073818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,673:0,41,255:17,0 chr2 202073819 . C . PASS END=202073819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:1:19:0,1,499:0,1,255:16,0 chr2 202073820 . T . PASS END=202073822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 202073823 . G . PASS END=202073823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 202073824 . G . PASS END=202073824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 202073825 . T . PASS END=202073825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,705:0,39,255:22,0 chr2 202073826 . T . PASS END=202073826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 202073827 . C . PASS END=202073827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:22,0 chr2 202073828 . A . PASS END=202073829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 202073830 . A . PASS END=202073830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 202073831 . G . PASS END=202073831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 202073832 . T . PASS END=202073832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:25,0 chr2 202073833 . G . PASS END=202073903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1215:0,87,255:40,0 chr2 202073904 . A . PASS END=202073904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,0 chr2 202073905 . T . PASS END=202073907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 202073908 . C . PASS END=202073908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 202073909 . G . PASS END=202074036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:33:0,85,1156:0,85,255:40,0 chr2 202074037 . G . PASS END=202074037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:34,0 chr2 202074038 . G . PASS END=202074166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:35:0,88,1084:0,88,255:40,0 chr2 202074167 . G . PASS END=202074167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr2 202074168 . A . PASS END=202074193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1271:0,89,255:36,0 chr2 202074194 . A . PASS END=202074196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 202074197 . G . PASS END=202074250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1155:0,80,255:34,0 chr2 202074251 . T . PASS END=202074268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:21:0,60,792:0,63,255:26,0 chr2 202074269 . A . PASS END=202074269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 202074270 . A . PASS END=202074274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202074275 . T . PASS END=202074275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 202074276 . T . PASS END=202074286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,870:0,63,255:24,0 chr2 202082308 . C . PASS END=202082308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 202082311 . A . PASS END=202082318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,856:0,61,255:25,0 chr2 202082319 . A . PASS END=202082319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,850:0,39,255:24,0 chr2 202082320 . C . PASS END=202082320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr2 202082321 . A . PASS END=202082321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 202082322 . T . PASS END=202082322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:30,0 chr2 202082323 . C . PASS END=202082464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:31:0,83,1157:0,83,255:40,0 chr2 202082580 . C . PASS END=202082580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:99:47:0,108,1689:0,108,255:40,0 chr2 202082600 . A . PASS END=202082600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:96:43:0,96,1385:0,96,255:38,0 chr2 202082944 . A . PASS END=202082944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 202083369 . C . PASS END=202083369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 202083375 . T . PASS END=202083375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 202083486 . C . PASS END=202083486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 202083502 . C . PASS END=202083502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202083589 . T . PASS END=202083589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 202084002 . T . PASS END=202084002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 202084006 . A . PASS END=202084006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1210:0,96,255:32,0 chr2 202084088 . T . PASS END=202084088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 202084118 . C . PASS END=202084118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 202084373 . A . PASS END=202084373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:60:0,120,1800:0,147,255:40,0 chr2 202084418 . C . PASS END=202084418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,2:54:90:54:0,90,1350:0,107,255:28,0 chr2 202084759 . T . PASS END=202084759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 202084845 . G . PASS END=202084845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 202084889 . C . PASS END=202084889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 202085051 . T . PASS END=202085051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:7,0 chr2 202085054 . G . PASS END=202085054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 202085064 . G . PASS END=202085064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 202085205 . C . PASS END=202085205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 202085308 . C . PASS END=202085308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 202085333 . A . PASS END=202085333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 202085388 . G . PASS END=202085388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 202085443 . C . PASS END=202085443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 202085450 . C . PASS END=202085450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 202085829 . A . PASS END=202085829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 202085884 . C . PASS END=202085884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 202085901 . C . PASS END=202085901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 202085937 . T . PASS END=202085937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 202085942 . T . PASS END=202085942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 202085952 . G . PASS END=202085952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 202085974 . G . PASS END=202085974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 202093656 . G . PASS END=202093806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1158:0,81,255:40,0 chr2 202097531 . T . PASS END=202097531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:22,0 chr2 202098159 . A . PASS END=202098159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,120,1800:0,128,255:40,0 chr2 202098261 . A . PASS END=202098261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 202098745 . C . PASS END=202098745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202098779 . T . PASS END=202098779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 202122955 . A . PASS END=202122955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr2 202122956 . T . PASS END=202122956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:28,0 chr2 202122957 . G . PASS END=202122957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 202122958 . G . PASS END=202122958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 202122959 . A . PASS END=202122963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 202122964 . G . PASS END=202122964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,991:0,76,255:30,0 chr2 202122965 . G . PASS END=202122965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,963:0,46,255:28,0 chr2 202122966 . C . PASS END=202122966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 202122967 . A . PASS END=202122967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,0 chr2 202122968 . G . PASS END=202122971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 202122972 . A . PASS END=202122972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 202122973 . G . PASS END=202122994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1242:0,96,255:36,0 chr2 202122995 . A G, 47.07 PASS DP=39;MQ=250.00;MQRankSum=5.239;ReadPosRankSum=2.955;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,16,0:0.410,0.000:39:10,7,0:13,9,0:46:82,0,50,535,817,1352:255,0,255:22,0:4.7070e+01,1.0691e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,10,5,11:12,11,10,6 chr2 202122996 . A . PASS END=202123032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1402:0,101,255:40,0 chr2 202123033 . C . PASS END=202123093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:39:0,84,1260:0,93,255:40,0 chr2 202123094 . A . PASS END=202123105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:63:28:0,63,945:0,80,255:23,0 chr2 202123108 . G . PASS END=202123108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:21,0 chr2 202131184 . A . PASS END=202131184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 202131185 . T . PASS END=202131188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:32,0 chr2 202131189 . A . PASS END=202131189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:30,0 chr2 202131190 . T . PASS END=202131204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:33,0 chr2 202131205 . A . PASS END=202131205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:32,0 chr2 202131206 . A . PASS END=202131210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1173:0,85,255:34,0 chr2 202131211 . T . PASS END=202131211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1225:0,72,255:33,0 chr2 202131212 . G . PASS END=202131221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:34:0,80,1218:0,80,255:37,0 chr2 202131222 . A . PASS END=202131222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1311:0,72,255:36,0 chr2 202131223 . G . PASS END=202131223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1366:0,111,255:37,0 chr2 202131224 . A . PASS END=202131225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1183:0,72,255:36,0 chr2 202131226 . A . PASS END=202131231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1228:0,80,255:37,0 chr2 202131232 . A . PASS END=202131232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1197:0,56,255:32,0 chr2 202131233 . T . PASS END=202131500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:87:36:0,87,1294:0,87,255:40,0 chr2 202131501 . A . PASS END=202131501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1219:0,69,255:31,0 chr2 202131502 . T . PASS END=202131514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1199:0,102,255:34,0 chr2 202134233 . G . PASS END=202134236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 202134237 . C . PASS END=202134238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 202134239 . C . PASS END=202134250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,978:0,78,255:26,0 chr2 202134251 . G . PASS END=202134317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,936:0,84,255:35,0 chr2 202134318 . C . PASS END=202134326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 202134327 . A . PASS END=202134328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202136239 . G . PASS END=202136344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:54:0,120,1800:0,143,255:40,0 chr2 202137361 . A . PASS END=202137499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:38:0,84,1239:0,84,255:40,0 chr2 202137621 . A . PASS END=202137665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:73:0,120,1800:0,186,255:40,0 chr2 202139612 . G . PASS END=202139670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:39:0,87,1305:0,99,255:40,0 chr2 202139671 . T . PASS END=202139671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1170:0,100,255:25,0 chr2 202139672 . C . PASS END=202139676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,92,255:27,0 chr2 202139682 . C . PASS END=202139682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 202141550 . A . PASS END=202141692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,2:72:99:45:0,120,1800:0,131,255:40,0 chr2 202141695 . C . PASS END=202141695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,181,255:40,0 chr2 202149539 . G . PASS END=202149555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1296:0,102,255:36,0 chr2 202149556 . T . PASS END=202149556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1233:0,61,255:34,0 chr2 202149557 . T . PASS END=202149658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:35:0,102,1265:0,103,255:40,0 chr2 202149659 . A . PASS END=202149695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,120,1800:0,125,255:40,0 chr2 202149696 . G A, 50.00 PASS DP=51;MQ=249.86;MQRankSum=5.617;ReadPosRankSum=2.708;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,30,0:0.588,0.000:51:7,17,0:14,13,0:47:85,0,47,1020,714,1734:255,0,255:20,0:5.0000e+01,8.4389e-05,5.0242e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,12,8,22:11,10,15,15 chr2 202149697 . G . PASS END=202149733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,152,255:40,0 chr2 202149734 . T . PASS END=202150029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:38:0,102,1528:0,114,255:40,0 chr2 202150030 . C . PASS END=202150030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:36,0 chr2 202150031 . G . PASS END=202150040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,108,1620:0,114,255:37,0 chr2 202150052 . C . PASS END=202150052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr2 202151182 . A . PASS END=202151200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,116,1566:0,116,255:40,0 chr2 202151201 . A . PASS END=202151317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:53:0,120,1800:0,143,255:40,0 chr2 202151895 . C . PASS END=202151895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 202151908 . T . PASS END=202151908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,178,255:40,0 chr2 202152129 . T . LowGQ END=202152129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,10:85:0:85:0,0,2431:108,0,255:40,6 chr2 202152208 . C . PASS END=202152208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:82:0,120,1800:0,230,255:40,0 chr2 202153378 . T . PASS END=202153504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:35:0,89,1278:0,89,255:40,0 chr2 202154164 . T . PASS END=202154289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:71:0,120,1800:0,174,255:40,0 chr2 202154419 . C . PASS END=202154419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:38,0 chr2 202154420 . T . PASS END=202154420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 202154421 . C . PASS END=202154421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1349:0,54,255:37,0 chr2 202154422 . T . PASS END=202154422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1450:0,110,255:39,0 chr2 202154423 . T . PASS END=202154423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1443:0,71,255:38,0 chr2 202154424 . T . PASS END=202154424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 202154425 . C . PASS END=202154425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1459:0,74,255:39,0 chr2 202154426 . T . PASS END=202154432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1382:0,81,255:40,0 chr2 202154433 . C . PASS END=202154433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1382:0,68,255:38,0 chr2 202154434 . C . PASS END=202154434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:41:0,85,1472:0,85,255:39,0 chr2 202154435 . A . PASS END=202154437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1383:0,84,255:40,0 chr2 202154438 . T . PASS END=202154438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1291:0,67,255:36,0 chr2 202154439 . G . PASS END=202154439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:93:44:0,93,1568:0,93,255:40,0 chr2 202154440 . G . PASS END=202154440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1430:0,77,255:40,0 chr2 202154441 . G . PASS END=202154449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:86:48:0,86,1743:0,86,255:40,0 chr2 202154450 . A . PASS END=202154450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:56:50:0,56,1660:0,56,255:40,0 chr2 202154451 . G . PASS END=202154452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,115,1829:0,115,255:40,0 chr2 202154453 . T . PASS END=202154453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1409:0,75,255:40,0 chr2 202154454 . T . PASS END=202154582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,120,255:40,0 chr2 202163961 . C . PASS END=202164023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,158,255:40,0 chr2 202172242 . C . PASS END=202172345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,0:99:99:83:0,120,1800:0,216,255:40,0 chr2 202173874 . T . PASS END=202173973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:49:0,120,1800:0,130,255:40,0 chr2 202195193 . C . PASS END=202195245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:94:0,120,1800:0,255,255:40,0 chr2 202195459 . C . PASS END=202195556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1215:0,84,255:40,0 chr2 202207093 . C . PASS END=202207154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,120,1800:0,150,255:40,1 chr2 202208893 . C . PASS END=202208986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:62:0,120,1800:0,182,255:40,0 chr2 202211265 . C . PASS END=202211271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr2 202211272 . A . PASS END=202211272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 202211273 . T . PASS END=202211273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 202211274 . C . PASS END=202211382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,1016:0,81,255:40,0 chr2 202211383 . A . PASS END=202211398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 202212977 . A . PASS END=202213025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:66:0,120,1800:0,164,255:40,0 chr2 202215434 . T . PASS END=202215434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,4:70:85:70:0,85,2161:0,85,255:40,0 chr2 202215435 . T . PASS END=202215435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,5:70:38:70:0,38,2106:0,38,255:40,0 chr2 202215436 . T . PASS END=202215436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,4:70:85:70:0,85,2305:0,85,255:40,0 chr2 202215437 . G . PASS END=202215438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,4:71:58:71:0,58,2221:0,58,255:40,0 chr2 202215439 . G . PASS END=202215440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,5:72:62:72:0,62,2356:0,62,255:40,0 chr2 202215441 . A . PASS END=202215491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:87:73:0,87,1800:0,87,255:40,0 chr2 202215492 . C G, 269.70 PASS DP=75;MQ=232.81;FractionInformativeReads=0.987 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,74,0:1.000,0.000:74:0,35,0:0,39,0:220:307,223,0,407,407,407:255,223,0:0,0:2.6970e+02,2.1970e+02,0.0000e+00,4.0447e+02,4.3950e+02,4.0748e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,25,49:0,0,38,36 chr2 202215493 . A . PASS END=202215505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,167,255:40,0 chr2 202216015 . T . PASS END=202216019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1025:0,87,255:29,0 chr2 202216020 . A . PASS END=202216020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 202216021 . C . PASS END=202216021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 202216022 . T . PASS END=202216025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1078:0,74,255:27,0 chr2 202216026 . T . PASS END=202216033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1086:0,84,255:28,0 chr2 202216034 . T . PASS END=202216034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,842:0,67,255:27,0 chr2 202216035 . C . PASS END=202216106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:28:0,80,958:0,80,255:38,0 chr2 202216107 . G . PASS END=202216125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,71,255:26,0 chr2 202216126 . A . PASS END=202216127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 202245266 . T . PASS END=202245281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:25:0,68,939:0,68,255:26,0 chr2 202245282 . A . PASS END=202245282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 202245283 . C . PASS END=202245464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1025:0,82,255:39,0 chr2 202245465 . T . PASS END=202245465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:29,0 chr2 202245466 . T . PASS END=202245471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,97,255:30,0 chr2 202245472 . C . PASS END=202245474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:35:0,75,1125:0,105,255:26,0 chr2 202245475 . C . PASS END=202245477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,108,255:29,0 chr2 202245478 . T . PASS END=202245478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 202245479 . G . PASS END=202245485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:28,0 chr2 202245486 . C . PASS END=202245495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 202245496 . T . PASS END=202245496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr2 202245497 . C . PASS END=202245500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202245501 . C . PASS END=202245515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,886:0,61,255:26,0 chr2 202245516 . A . PASS END=202245521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1116:0,87,255:29,0 chr2 202245522 . A . PASS END=202245522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 202245523 . A . PASS END=202245532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,981:0,87,255:31,0 chr2 202245533 . A . PASS END=202245534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:32:0,66,1078:0,66,255:29,0 chr2 202245535 . C . PASS END=202245535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 202245536 . A . PASS END=202245536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1209:0,72,255:30,0 chr2 202245537 . G . PASS END=202245879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1122:0,80,255:40,0 chr2 202245880 . T . PASS END=202245880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 202245881 . C . PASS END=202245884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 202245885 . G . PASS END=202245898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:65:24:0,65,976:0,65,255:26,0 chr2 202245899 . A . PASS END=202245901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 202245902 . G . PASS END=202245911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:23:0,42,630:0,53,255:19,0 chr2 202245912 . C . PASS END=202245917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,52,255:13,0 chr2 202245918 . C . PASS END=202245925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:21:21:0,21,315:0,46,255:9,0 chr2 202245926 . T . PASS END=202245933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:12:21:0,12,180:0,47,255:6,0 chr2 202245934 . A . LowGQ END=202245941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:22,0:22:0:21:0,0,0:0,63,255:3,0 chr2 202248834 . C . PASS END=202248845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:29:0,86,1027:0,86,255:37,0 chr2 202248846 . T . PASS END=202248934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:28:0,81,1158:0,84,255:40,0 chr2 202248935 . T . PASS END=202248939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 202250941 . C . PASS END=202250941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 202250942 . T . PASS END=202250946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,917:0,62,255:26,0 chr2 202250947 . C . PASS END=202250947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202250948 . T . PASS END=202250948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:25,0 chr2 202250949 . G . PASS END=202250957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:30,0 chr2 202250958 . G . PASS END=202250958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 202250959 . C . PASS END=202250963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:31,0 chr2 202250964 . G . PASS END=202250964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:30,0 chr2 202250965 . T . PASS END=202250971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1135:0,96,255:32,0 chr2 202250972 . T . PASS END=202250972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr2 202250973 . G . PASS END=202251161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:29:0,81,1174:0,82,255:40,0 chr2 202251162 . A . PASS END=202251185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,878:0,61,255:25,0 chr2 202251186 . C . PASS END=202251196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:24:0,48,720:0,56,255:19,0 chr2 202251197 . A . PASS END=202251197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:15,0 chr2 202251198 . G . PASS END=202251207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,46,255:15,0 chr2 202252426 . C . PASS END=202252463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1123:0,80,255:35,0 chr2 202252464 . A . PASS END=202252464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:33,0 chr2 202252465 . A . PASS END=202252724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:35:0,88,1203:0,88,255:40,0 chr2 202252771 . A . PASS END=202252798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:41:0,93,1395:0,105,255:40,0 chr2 202254023 . C . PASS END=202254025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 202254026 . G . PASS END=202254026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1029:0,57,255:27,0 chr2 202254027 . C . PASS END=202254034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:36,0 chr2 202254035 . T . PASS END=202254035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:34,0 chr2 202254036 . C . PASS END=202254226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:32:0,90,1296:0,92,255:40,0 chr2 202254524 . T . PASS END=202254603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,128,255:40,0 chr2 202257632 . C . PASS END=202257738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:92:33:0,92,1185:0,92,255:40,0 chr2 202257739 . A . PASS END=202257739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 202257740 . C . PASS END=202257751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:31,0 chr2 202257752 . G . PASS END=202257764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:23:0,63,945:0,69,255:22,0 chr2 202257765 . T . PASS END=202257769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 202259521 . C . PASS END=202259595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,126,255:40,0 chr2 202260001 . T . PASS END=202260011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:89:0,120,1800:0,229,255:40,0 chr2 202260012 . C . PASS END=202260048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:91:0,120,1800:0,235,255:40,0 chr2 202260049 . G A, 329.90 PASS DP=94;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,94,0:1.000,0.000:94:0,48,0:0,46,0:280:368,283,0,3620,283,3620:255,255,0:0,0:3.2990e+02,2.7990e+02,0.0000e+00,4.4853e+02,3.1467e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,51,43:0,0,51,43 chr2 202260050 . T . PASS END=202260086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:90:0,120,1800:0,215,255:40,0 chr2 202260087 . G . PASS END=202260167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:47:0,111,1665:0,141,255:40,0 chr2 202262225 . G . PASS END=202262303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:67:0,120,1800:0,200,255:40,0 chr2 202262868 . C . PASS END=202262880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,805:0,72,255:25,0 chr2 202262881 . G . PASS END=202262883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 202262884 . A . PASS END=202262884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,966:0,68,255:27,0 chr2 202262885 . T . PASS END=202262901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 202262902 . T . PASS END=202262902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:29,0 chr2 202262903 . C . PASS END=202262913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr2 202262914 . T . PASS END=202262914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,869:0,73,255:28,0 chr2 202262915 . C . PASS END=202262947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:30:0,82,1030:0,82,255:32,0 chr2 202262948 . A . PASS END=202262948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1135:0,63,255:31,0 chr2 202262949 . T . PASS END=202262950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 202262951 . A . PASS END=202262951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:30,0 chr2 202262952 . G . PASS END=202262956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:88:35:0,88,1182:0,88,255:34,0 chr2 202262957 . A . PASS END=202262957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1229:0,77,255:33,0 chr2 202262958 . G . PASS END=202262990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1227:0,88,255:36,0 chr2 202262991 . G . PASS END=202262991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1304:0,77,255:33,0 chr2 202262992 . G . PASS END=202263016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1170:0,83,255:34,0 chr2 202263017 . C . PASS END=202263021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 202263022 . G . PASS END=202263030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,979:0,81,255:28,0 chr2 202263031 . C . PASS END=202263031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:27,0 chr2 202263032 . G . PASS END=202263032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 202263033 . A . PASS END=202263038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 202263039 . C . PASS END=202263039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr2 202263040 . T . PASS END=202263040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 202263041 . C . PASS END=202263041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:28,0 chr2 202263042 . A . PASS END=202263042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 202263043 . T . PASS END=202263043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,958:0,84,255:28,0 chr2 202263044 . C . PASS END=202263062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,67,255:25,0 chr2 202263063 . C . PASS END=202263073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,652:0,43,255:19,0 chr2 202263074 . T . PASS END=202263074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:14,0 chr2 202263075 . A . PASS END=202263077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:15,0 chr2 202264100 . T . PASS END=202264118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:32:0,93,1395:0,96,255:40,0 chr2 202264119 . A . PASS END=202264155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,114,1635:0,114,255:40,0 chr2 202264156 . C T, 200.02 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,23,0:0,28,0:150:238,153,0,338,338,338:255,153,0:0,0:2.0002e+02,1.5002e+02,0.0000e+00,3.3479e+02,3.6956e+02,3.3780e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,26,25:0,0,22,29 chr2 202264157 . A . PASS END=202264193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,120,1800:0,129,255:40,0 chr2 202264194 . G . PASS END=202264216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:96:38:0,96,1440:0,106,255:40,0 chr2 202265741 . C . PASS END=202265817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:96:42:0,96,1440:0,126,255:40,0 chr2 202272126 . T . PASS END=202272161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1202:0,91,255:39,0 chr2 202272162 . A . PASS END=202272162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:35:41:0,35,1255:0,35,255:34,0 chr2 202272163 . G . PASS END=202272320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:31:0,80,1139:0,80,255:40,0 chr2 202285140 . C . PASS END=202285230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,111,1702:0,111,255:40,0 chr2 202319564 . A . PASS END=202319575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:96:0,120,1800:0,255,255:40,0 chr2 202323507 . G . PASS END=202323587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:67:0,120,1800:0,199,255:40,0 chr2 202334676 . G . PASS END=202334677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 202334678 . T . PASS END=202334678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 202334679 . G . PASS END=202334680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 202334681 . T . PASS END=202334681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 202334682 . G . PASS END=202334775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:90:31:0,90,1235:0,92,255:40,0 chr2 202337678 . G . PASS END=202337692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,141,255:40,0 chr2 202337693 . A . PASS END=202337729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,159,255:40,0 chr2 202337730 . A G, 263.24 PASS DP=72;MQ=194.64;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,72,0:1.000,0.000:72:0,41,0:0,31,0:213:301,216,0,2752,216,2752:255,217,0:0,0:2.6324e+02,2.1324e+02,0.0000e+00,4.5000e+02,2.4801e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,36:0,0,39,33 chr2 202337731 . G . PASS END=202337767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:63:0,120,1800:0,146,255:40,0 chr2 202337768 . A . PASS END=202337799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,131,255:40,0 chr2 202339370 . A . PASS END=202339478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,128,255:40,0 chr2 202340342 . G . PASS END=202340454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:39:0,93,1316:0,103,255:40,0 chr2 202340455 . T . PASS END=202340459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:38:0,78,1170:0,114,255:26,0 chr2 202340460 . T . PASS END=202340460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr2 202340461 . C . PASS END=202340465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:63:34:0,63,1035:0,63,255:24,0 chr2 202342342 . G . PASS END=202342353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,864:0,72,255:24,0 chr2 202342354 . C . PASS END=202342354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 202342355 . A . PASS END=202342363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr2 202342364 . C . PASS END=202342364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202342365 . T . PASS END=202342369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202342370 . T . PASS END=202342379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 202342380 . G . PASS END=202342401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1202:0,87,255:31,0 chr2 202342402 . G T, 140.30 PASS DP=31;MQ=153.20;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,18,0:0,13,0:90:178,93,0,1198,93,1198:255,93,0:0,0:1.4030e+02,9.0301e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,15:0,0,15,16 chr2 202342403 . T . PASS END=202342439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1138:0,93,255:37,0 chr2 202342440 . A . PASS END=202342513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:31:0,90,1350:0,93,255:37,0 chr2 202342810 . G . PASS END=202342914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:33:0,90,1239:0,98,255:40,0 chr2 202343080 . A . PASS END=202343080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 202343081 . T . PASS END=202343091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:31,0 chr2 202343092 . A . PASS END=202343092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:30,0 chr2 202343093 . A . PASS END=202343186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:90:32:0,90,1350:0,96,255:40,0 chr2 202343187 . G . PASS END=202343187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1729:0,78,255:40,0 chr2 202343188 . A . PASS END=202343304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:37:0,107,1447:0,107,255:40,0 chr2 202343305 . C . PASS END=202343305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr2 202343306 . A . PASS END=202343324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1329:0,95,255:37,0 chr2 202344212 . G . PASS END=202344225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,102,1335:0,108,255:40,0 chr2 202344226 . G . PASS END=202344226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 202344227 . T . PASS END=202344227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:68:45:0,68,1170:0,68,255:40,0 chr2 202344228 . T . PASS END=202344254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,114,1659:0,119,255:40,0 chr2 202344731 . C . PASS END=202344751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,140,255:40,0 chr2 202344755 . A . PASS END=202344892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:35:0,81,1215:0,104,255:40,0 chr2 202344893 . T . PASS END=202344898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:35:0,69,1035:0,89,255:23,0 chr2 202352335 . T . PASS END=202352614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:33:0,87,1195:0,88,255:40,2 chr2 202352615 . T . PASS END=202352625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:30:0,60,900:0,74,255:25,0 chr2 202355892 . A . PASS END=202357911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:83:40:0,83,1485:0,83,255:40,0 chr2 202357912 . C . PASS END=202357948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:72:0,120,1800:0,169,255:40,0 chr2 202357949 . A C, 313.94 PASS DP=89;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,89,0:1.000,0.000:89:0,48,0:0,41,0:264:352,267,0,3379,267,3379:255,255,0:0,0:3.1394e+02,2.6394e+02,0.0000e+00,4.4853e+02,2.9871e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,61:0,0,49,40 chr2 202357950 . A . PASS END=202357986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:82:0,120,1800:0,206,255:40,0 chr2 202357987 . T . PASS END=202359311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:88:43:0,88,1450:0,88,255:40,1 chr2 202359312 . T . PASS END=202359312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1740:0,79,255:40,0 chr2 202359313 . G . PASS END=202359482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,104,1710:0,104,255:40,0 chr2 202360618 . C . PASS END=202360692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:81:0,120,1800:0,223,255:40,0 chr2 202400597 . C . PASS END=202401043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,99,1476:0,105,255:40,0 chr2 202402159 . C . PASS END=202402205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:91:0,120,1800:0,255,255:40,1 chr2 202410266 . C . PASS END=202410301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:72:0,120,1800:0,193,255:40,0 chr2 202410302 . G . PASS END=202410302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,9:108:72:108:0,72,3481:0,72,255:40,0 chr2 202410303 . A . PASS END=202410311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,8:110:99:109:0,120,1800:0,130,255:40,0 chr2 202410312 . C . PASS END=202410312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,15:113:24:113:0,24,3358:0,24,255:40,0 chr2 202410313 . G . PASS END=202410320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,2:113:87:113:0,87,1800:0,87,255:40,0 chr2 202410321 . A . PASS END=202410321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,12:113:38:113:0,38,3477:0,38,255:40,0 chr2 202410322 . G . PASS END=202410322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,12:113:99:113:0,112,3487:0,112,255:40,0 chr2 202410323 . A . PASS END=202410323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,11:113:76:113:0,76,3375:0,76,255:40,0 chr2 202410324 . T . PASS END=202410328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,9:112:99:111:0,116,1800:0,116,255:40,0 chr2 202410329 . C . PASS END=202410329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,10:112:67:112:0,67,3387:0,67,255:40,0 chr2 202410330 . A . PASS END=202410331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,9:112:99:112:0,99,1800:0,99,255:40,0 chr2 202410332 . C . PASS END=202410332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,14:112:3:112:0,3,3275:0,3,255:40,0 chr2 202410333 . T . PASS END=202410335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,8:108:90:106:0,90,1800:0,90,255:40,0 chr2 202410336 . A . LowGQ END=202410336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,11:104:0:104:0,0,3036:3,0,255:40,0 chr2 202410337 . T . PASS END=202410338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,2:104:99:101:0,120,1800:0,215,255:40,0 chr2 202410339 . A . PASS END=202410339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,10:94:72:94:0,72,2760:0,72,255:39,0 chr2 202410340 . G . LowGQ END=202410340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,12:93:0:93:0,0,2548:53,0,255:38,0 chr2 202410341 . T . PASS END=202410342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,5:87:99:87:0,120,1800:0,178,255:40,0 chr2 202410343 . T . PASS END=202410343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,10:80:60:80:0,60,2361:0,60,255:39,0 chr2 202410344 . C . PASS END=202410344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,11:80:35:80:0,35,2283:0,35,255:37,0 chr2 202412228 . C . PASS END=202412333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:75:0,120,1800:0,218,255:40,0 chr2 202430452 . C . PASS END=202430452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:69:51:0,69,1282:0,69,255:40,0 chr2 202430453 . T . PASS END=202430480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:99:51:0,113,1690:0,113,255:40,0 chr2 202430481 . A . PASS END=202430572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:85:40:0,85,1305:0,85,255:40,0 chr2 202430573 . C . PASS END=202430580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:31:0,69,1035:0,93,255:25,0 chr2 202430581 . G . PASS END=202430581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,990:0,57,255:20,0 chr2 202430582 . G . PASS END=202430595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,870:0,61,255:21,0 chr2 202436664 . G . PASS END=202436743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,159,255:40,0 chr2 202438932 . C . PASS END=202439000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,182,255:40,0 chr2 202440005 . T . PASS END=202440049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:79:0,120,1800:0,187,255:40,0 chr2 202446818 . C . PASS END=202446940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:57:0,120,1800:0,155,255:40,0 chr2 202466462 . C . PASS END=202466607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:46:0,120,1800:0,138,255:40,0 chr2 202467947 . T . PASS END=202467998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:72:0,120,1800:0,195,255:40,0 chr2 202469334 . C . PASS END=202469360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:49:0,120,1800:0,132,255:40,0 chr2 202469361 . C T, 219.70 PASS DP=58;MQ=250.00;FractionInformativeReads=0.983 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,26,0:0,31,0:170:257,173,0,357,357,357:255,174,0:0,0:2.1970e+02,1.6970e+02,0.0000e+00,3.5447e+02,3.8924e+02,3.5748e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,41,16:0,0,30,27 chr2 202469362 . G . PASS END=202469398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,145,255:40,0 chr2 202469399 . C . PASS END=202469420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,137,255:40,0 chr2 202483623 . G . PASS END=202483637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 202483638 . C . PASS END=202483641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 202483642 . G . PASS END=202483646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:12,0 chr2 202483647 . C . PASS END=202483662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr2 202483663 . T . PASS END=202483663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 202483664 . T . PASS END=202483702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,568:0,48,255:19,0 chr2 202483703 . C . PASS END=202483717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 202483718 . A . PASS END=202483718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 202483719 . C . PASS END=202483765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:26,0 chr2 202483766 . A . PASS END=202483766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 202483767 . T . PASS END=202483805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:25,0 chr2 202483806 . G . PASS END=202483806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr2 202483807 . T . PASS END=202483807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 202483808 . T . PASS END=202483808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 202483809 . A . PASS END=202483813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 202483814 . G . PASS END=202483814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 202483815 . T . PASS END=202483824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 202483825 . G . PASS END=202483825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 202483826 . G . PASS END=202483832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 202483833 . T . PASS END=202483846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:18,0 chr2 202483847 . G . PASS END=202483847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 202483848 . C . PASS END=202483849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 202483850 . C . PASS END=202483850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr2 202483851 . C . PASS END=202483851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,459:0,18,255:15,0 chr2 202483852 . A . PASS END=202483853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,519:0,34,255:16,0 chr2 202484958 . A . PASS END=202484958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 202484981 . T . PASS END=202484981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 202484986 . T . PASS END=202484986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,117,1755:0,141,255:39,0 chr2 202485123 . T . PASS END=202485123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1317:0,105,255:35,0 chr2 202485250 . T . PASS END=202485250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 202485281 . C . PASS END=202485281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 202485461 . T . PASS END=202485461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202485464 . T . PASS END=202485464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202485593 . G . PASS END=202485593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 202485628 . T . PASS END=202485628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202485855 . A . PASS END=202485855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1380:0,98,255:37,0 chr2 202485965 . T . PASS END=202485965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 202486014 . A . PASS END=202486014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 202486018 . G . PASS END=202486018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202486296 . C . PASS END=202486296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 202486308 . G . PASS END=202486308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 202486326 . T . PASS END=202486326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:17,0 chr2 202486352 . A . PASS END=202486352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202486396 . C . PASS END=202486396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 202486483 . G . PASS END=202486483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 202486513 . T . PASS END=202486513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 202486530 . G . PASS END=202486530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 202486671 . T . PASS END=202486671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,915:0,75,255:25,0 chr2 202486837 . G . PASS END=202486837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 202486934 . A . PASS END=202486934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 202487013 . C . PASS END=202487013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 202487088 . C . PASS END=202487088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 202487099 . C . PASS END=202487099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 202487143 . G . PASS END=202487143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 202487216 . C . PASS END=202487216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr2 202487323 . C . PASS END=202487323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 202487372 . A . PASS END=202487372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 202487375 . A . PASS END=202487375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:99:41:0,107,1474:0,107,255:37,0 chr2 202487417 . C . PASS END=202487418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 202487542 . C . PASS END=202487542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 202487596 . G . PASS END=202487596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 202487600 . T . PASS END=202487600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 202487648 . G . PASS END=202487648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 202487675 . C . PASS END=202487675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 202487827 . G . PASS END=202487827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 202487830 . T . PASS END=202487830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 202487870 . T . PASS END=202487870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 202487970 . T . PASS END=202487970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 202487991 . G . PASS END=202487991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 202488009 . T . PASS END=202488009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 202488016 . T . PASS END=202488016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 202488038 . T . PASS END=202488038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 202488083 . G . PASS END=202488083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 202488197 . C . PASS END=202488197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202488262 . C . PASS END=202488262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 202488315 . C . PASS END=202488315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 202488486 . A . PASS END=202488486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 202488504 . T . PASS END=202488504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 202488670 . A . PASS END=202488670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,211,255:40,0 chr2 202488675 . G . PASS END=202488675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 202488695 . T . PASS END=202488695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 202488719 . A . PASS END=202488719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 202488904 . A . PASS END=202488904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:95:0,120,1800:0,255,255:40,0 chr2 202488916 . T . PASS END=202488916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:93:0,120,1800:0,255,255:40,0 chr2 202488975 . G . PASS END=202488975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,0:115:99:115:0,120,1800:0,255,255:40,0 chr2 202488978 . T . PASS END=202489045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,2:108:99:83:0,120,1800:0,216,255:40,0 chr2 202490749 . C . PASS END=202490870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:49:0,120,1800:0,131,255:40,0 chr2 202492044 . C . PASS END=202492133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:81:45:0,81,1215:0,135,255:40,0 chr2 202492134 . T . PASS END=202492137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:78:38:0,78,1170:0,114,255:26,0 chr2 202492798 . C . PASS END=202492872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:81:0,120,1800:0,211,255:40,2 chr2 202493943 . T . PASS END=202493943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1418:0,98,255:35,0 chr2 202493948 . A . PASS END=202493948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 202493952 . C . PASS END=202494144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,105,1575:0,119,255:40,0 chr2 202494451 . C . PASS END=202494576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:39:0,81,1215:0,112,255:40,0 chr2 202496773 . C . PASS END=202496931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:39:0,101,1382:0,101,255:40,0 chr2 202496944 . C . PASS END=202496944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr2 202498034 . T . PASS END=202498153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:34:0,81,1215:0,92,255:40,0 chr2 202498154 . T . PASS END=202498154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr2 202498156 . T . PASS END=202498156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 202499600 . T . PASS END=202499616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1213:0,99,255:33,0 chr2 202501471 . C . PASS END=202501472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 202501473 . A . PASS END=202501473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 202501474 . G . PASS END=202501474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 202501475 . A . PASS END=202501475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,895:0,67,255:27,0 chr2 202501476 . G . PASS END=202501477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 202501478 . T . PASS END=202501478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:27,0 chr2 202501479 . A . PASS END=202501480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr2 202501481 . C . PASS END=202501481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 202501482 . C . PASS END=202501485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:30,0 chr2 202501486 . T . PASS END=202501583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1088:0,82,255:40,0 chr2 202501584 . G . PASS END=202501605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr2 202501606 . T . PASS END=202501608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 202501611 . A . PASS END=202501611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr2 202503711 . C . PASS END=202503773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,193,255:40,0 chr2 202504984 . C . PASS END=202504988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:86:0,120,1800:0,242,255:40,0 chr2 202505616 . C . PASS END=202505647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:47:0,120,1800:0,124,255:40,0 chr2 202507332 . C . PASS END=202507336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:23,0 chr2 202507337 . G . PASS END=202507337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 202507338 . A . PASS END=202507349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 202508082 . C . PASS END=202508082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 202508083 . A . PASS END=202508083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:32,0 chr2 202508084 . G . PASS END=202508088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1211:0,88,255:33,0 chr2 202508089 . C . PASS END=202508101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:62:30:0,62,1035:0,62,255:26,0 chr2 202508102 . G . PASS END=202508103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:26:0,34,900:0,34,255:23,0 chr2 202508104 . G . PASS END=202508117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,62,255:25,0 chr2 202508118 . C . PASS END=202508123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 202508182 . C . PASS END=202508182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 202508184 . C . PASS END=202508184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 202508190 . A . PASS END=202508190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 202508249 . C . PASS END=202508249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 202509933 . T . PASS END=202509934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:21,0 chr2 202509935 . A . PASS END=202509935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 202509936 . T . PASS END=202509963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:25,0 chr2 202509964 . G . PASS END=202509964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 202509965 . T . PASS END=202509981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,886:0,61,255:25,0 chr2 202509982 . G . PASS END=202510127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:31:0,87,1305:0,93,255:40,0 chr2 202512414 . C . PASS END=202512548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:63:0,120,1800:0,171,255:40,1 chr2 202514299 . C . PASS END=202514392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:32:0,80,1167:0,80,255:40,0 chr2 202514393 . C . PASS END=202514407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:17:0,45,675:0,51,255:17,0 chr2 202514795 . C . PASS END=202514888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,109,1624:0,109,255:40,0 chr2 202519560 . G . PASS END=202519640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,114,1710:0,153,255:40,0 chr2 202520921 . C . PASS END=202520978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,693:0,60,255:26,0 chr2 202520979 . C . PASS END=202520987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,995:0,81,255:28,0 chr2 202520988 . G . PASS END=202520991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 202520992 . C . PASS END=202521003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1094:0,87,255:29,0 chr2 202521004 . T . PASS END=202521004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 202521005 . A . PASS END=202521012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr2 202521013 . C . PASS END=202521021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 202521022 . C . PASS END=202521024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202521025 . A . PASS END=202521041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,990:0,65,255:26,0 chr2 202521042 . G . PASS END=202521042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 202521043 . C . PASS END=202521055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:24,0 chr2 202521056 . T . PASS END=202521056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,766:0,53,255:19,0 chr2 202521057 . C . PASS END=202521058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 202521059 . T . PASS END=202521063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 202521064 . C . PASS END=202521064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202521065 . A . PASS END=202521091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,712:0,44,255:19,0 chr2 202523200 . C . PASS END=202523241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:62:0,109,1800:0,109,255:40,0 chr2 202525055 . C . PASS END=202525069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,2:115:99:110:0,120,1800:0,255,255:40,0 chr2 202528804 . C . PASS END=202528824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:137,0:137:99:133:0,120,1800:0,255,255:40,0 chr2 202528998 . T . PASS END=202529059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:80:31:0,80,1163:0,80,255:39,0 chr2 202531057 . C . PASS END=202531095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:76:0,120,1800:0,175,255:40,0 chr2 202534456 . C . PASS END=202534473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,3:107:99:106:0,120,1800:0,255,255:40,0 chr2 202539930 . A . PASS END=202539930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1260:0,108,255:36,0 chr2 202539931 . T . PASS END=202539931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:35,0 chr2 202539932 . A . PASS END=202539994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:36:0,94,1321:0,94,255:40,0 chr2 202545561 . C . PASS END=202545587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,759:0,60,255:26,0 chr2 202545588 . A . PASS END=202545597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1202:0,86,255:36,0 chr2 202545598 . A . PASS END=202545598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr2 202545599 . G . PASS END=202545609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:37,0 chr2 202545610 . C . PASS END=202545610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr2 202545611 . T . PASS END=202545681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1299:0,95,255:39,0 chr2 202545682 . A . PASS END=202545682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:33,0 chr2 202545683 . A . PASS END=202545716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:35,0 chr2 202545717 . T . PASS END=202545721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 202545722 . C . PASS END=202545722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202545723 . T . PASS END=202545732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,65,255:25,0 chr2 202545733 . A . PASS END=202545733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 202545734 . C . PASS END=202545743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:21,0 chr2 202545744 . G . PASS END=202545757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,53,255:17,0 chr2 202546219 . C . PASS END=202546290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:84:0,120,1800:0,205,255:40,0 chr2 202547554 . C . PASS END=202547565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,141,255:40,0 chr2 202547566 . C . PASS END=202547639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:49:0,108,1620:0,129,255:40,0 chr2 202549787 . C . PASS END=202549791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,682:0,57,255:19,0 chr2 202549792 . C . PASS END=202549792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 202549793 . T . PASS END=202549796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202549797 . C . PASS END=202549801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202549802 . G . PASS END=202549802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:19,0 chr2 202549803 . C . PASS END=202549825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,815:0,63,255:23,0 chr2 202549826 . C . PASS END=202549826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 202549827 . C . PASS END=202549843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,839:0,69,255:23,0 chr2 202549844 . T . PASS END=202549844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 202549845 . C . PASS END=202549862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:23,0 chr2 202549863 . G . PASS END=202549868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:16,0 chr2 202550642 . C . PASS END=202550642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:34,0 chr2 202550643 . A . PASS END=202550773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1260:0,84,255:40,0 chr2 202552014 . C . PASS END=202552089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:33:0,90,1350:0,99,255:40,0 chr2 202552090 . A . PASS END=202552094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 202554925 . C . PASS END=202555002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:42:0,116,1590:0,116,255:40,0 chr2 202557631 . C . PASS END=202557639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 202557640 . A . PASS END=202557640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:20,0 chr2 202557641 . G . PASS END=202557655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,808:0,62,255:26,0 chr2 202557656 . G . PASS END=202557664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1031:0,81,255:30,0 chr2 202557665 . A . PASS END=202557666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 202557667 . A . PASS END=202557667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1003:0,76,255:30,0 chr2 202557668 . T . PASS END=202557673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1111:0,93,255:31,0 chr2 202557674 . A . PASS END=202557674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 202557675 . A . PASS END=202557684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1125:0,82,255:35,0 chr2 202557685 . T . PASS END=202557685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:32,0 chr2 202557686 . C . PASS END=202557691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1278:0,89,255:34,0 chr2 202557692 . A . PASS END=202557692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:31,0 chr2 202557693 . C . PASS END=202557701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1241:0,89,255:35,0 chr2 202557702 . C T, 152.33 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,17,0:0,18,0:102:190,105,0,290,290,290:255,105,0:0,0:1.5233e+02,1.0233e+02,0.0000e+00,2.8710e+02,3.2187e+02,2.9011e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,25,10:0,0,19,16 chr2 202557703 . G . PASS END=202557739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1082:0,88,255:35,0 chr2 202557740 . A . PASS END=202557740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202557741 . T . PASS END=202557741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 202557742 . C . PASS END=202557744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202557745 . G . PASS END=202557752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:27:0,64,797:0,64,255:26,0 chr2 202558599 . C . PASS END=202558694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:57:0,120,1800:0,150,255:40,0 chr2 202563310 . C . PASS END=202563331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:60:0,120,1800:0,147,255:40,0 chr2 202565036 . G . PASS END=202565036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,969:0,75,255:25,0 chr2 202565041 . G . PASS END=202565041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 202565073 . T . PASS END=202565073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 202565176 . G . PASS END=202565176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 202565246 . C . PASS END=202565246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 202565315 . T . PASS END=202565315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 202565325 . C . PASS END=202565325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,117,1755:0,144,255:39,0 chr2 202565355 . G . PASS END=202565355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,114,1710:0,132,255:38,0 chr2 202565474 . T . PASS END=202565474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 202565481 . G . PASS END=202565481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1274:0,94,255:35,0 chr2 202565495 . T . PASS END=202565495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 202565662 . T . PASS END=202565662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 202565810 . T . PASS END=202565810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 202565988 . C . PASS END=202565988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 202565990 . C . PASS END=202565990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:26,0 chr2 202566070 . C . PASS END=202566070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 202566148 . A . PASS END=202566148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 202566272 . T . PASS END=202566272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 202566559 . A . PASS END=202566559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 202566574 . C . PASS END=202566612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:67:0,120,1800:0,185,255:40,0 chr2 202568845 . C . PASS END=202568941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:38:0,114,1387:0,114,255:40,0 chr2 202569175 . A . PASS END=202569175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 202569177 . C . PASS END=202569326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:31:0,84,1260:0,90,255:40,0 chr2 202569862 . C . PASS END=202569923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,113,1513:0,113,255:40,0 chr2 202569927 . C . PASS END=202569927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 202570139 . C . PASS END=202570184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:79:0,120,1800:0,215,255:40,0 chr2 202571569 . C . PASS END=202571599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,99,1328:0,102,255:40,0 chr2 202571600 . T . PASS END=202571733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1215:0,90,255:40,0 chr2 202571734 . G . PASS END=202571743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:26,0 chr2 202571744 . A . PASS END=202571745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:28:0,57,855:0,84,255:19,0 chr2 202571759 . G . PASS END=202571759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 202572588 . T . PASS END=202572588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 202572592 . C . PASS END=202572682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:35:0,81,1215:0,95,255:40,0 chr2 202572683 . T . PASS END=202572700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:24:0,66,990:0,66,255:29,0 chr2 202572701 . C . PASS END=202572709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,55,255:19,0 chr2 202572710 . A . PASS END=202572714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 202574604 . C . PASS END=202574607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 202574608 . C . PASS END=202574608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 202574609 . C . PASS END=202574610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 202574611 . G . PASS END=202574611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 202574612 . C . PASS END=202574619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 202574620 . T . PASS END=202574620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 202574621 . T . PASS END=202574625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1031:0,84,255:29,0 chr2 202574626 . T . PASS END=202574626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 202574627 . A . PASS END=202574723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1201:0,81,255:40,0 chr2 202574724 . A . PASS END=202574736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr2 202574737 . G . PASS END=202574750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:18:0,51,765:0,54,255:18,0 chr2 202574751 . G . PASS END=202574751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 202574752 . T . PASS END=202574755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 202574756 . A . PASS END=202574756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,488:0,21,255:15,0 chr2 202574757 . C . PASS END=202574761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 202574765 . A . PASS END=202574765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 202575714 . C . PASS END=202575745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1202:0,88,255:38,0 chr2 202575746 . T . PASS END=202575746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1200:0,75,255:37,0 chr2 202575747 . C . PASS END=202575783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1259:0,81,255:40,0 chr2 202575784 . T . PASS END=202575805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:43:0,87,1305:0,102,255:40,0 chr2 202575806 . T . PASS END=202575806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr2 202575807 . C . PASS END=202575810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 202575811 . G . PASS END=202575820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,81,255:26,0 chr2 202575821 . G A, 127.80 PASS DP=27;MQ=249.12;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,12,0:0,15,0:78:166,81,0,1009,81,1009:255,81,0:0,0:1.2780e+02,7.7798e+01,0.0000e+00,4.5000e+02,1.1257e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,20:0,0,14,13 chr2 202575822 . T . PASS END=202575826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:20,0 chr2 202575827 . C . PASS END=202575831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 202579877 . T . PASS END=202579901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:54:0,120,1800:0,146,255:40,0 chr2 202580389 . A . PASS END=202580389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 202580395 . C . PASS END=202580395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 202580396 . T . LowGQ END=202580396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,388:27,0,255:12,0 chr2 202580397 . G . PASS END=202580397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 202580398 . T . PASS END=202580398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 202580399 . C . PASS END=202580399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 202580400 . T . PASS END=202580400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 202580401 . C . PASS END=202580402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 202580403 . G . PASS END=202580404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 202580405 . G . PASS END=202580406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 202580407 . T . PASS END=202580407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 202580408 . G . PASS END=202580408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr2 202580409 . G . PASS END=202580418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr2 202580419 . G . PASS END=202580433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:25,0 chr2 202580434 . G . PASS END=202580452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,985:0,81,255:28,0 chr2 202580453 . T . PASS END=202580457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 202580458 . A . PASS END=202580458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202580459 . C . PASS END=202580467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 202580468 . G . PASS END=202580469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202580470 . C . PASS END=202580470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 202580471 . C . PASS END=202580471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202580472 . T . PASS END=202580498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:22:0,65,815:0,65,255:26,0 chr2 202580499 . A . PASS END=202580499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:21,0 chr2 202580500 . C . PASS END=202580502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 202580503 . T . PASS END=202580503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 202580504 . C . PASS END=202580508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 202580509 . A . PASS END=202580511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,727:0,50,255:21,0 chr2 202580512 . A . PASS END=202580514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 202580515 . G . PASS END=202580515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:18,0 chr2 202580516 . C . PASS END=202580519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 202580520 . C . PASS END=202580526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:21:0,47,729:0,47,255:19,0 chr2 202580527 . T . PASS END=202580528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202580529 . A . PASS END=202580531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr2 202580532 . A . PASS END=202580532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:19,0 chr2 202580533 . G . PASS END=202580546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 202580547 . G . PASS END=202580547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 202580548 . T . PASS END=202580552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 202580553 . T . PASS END=202580562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 202582800 . A . PASS END=202582933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:93:38:0,93,1254:0,97,255:40,0 chr2 202584759 . T . PASS END=202584851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:86:45:0,86,1562:0,86,255:40,0 chr2 202587766 . C . PASS END=202587843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:46:0,120,1800:0,121,255:40,0 chr2 202588053 . C . PASS END=202588164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:67:0,120,1800:0,185,255:40,0 chr2 202589018 . C . PASS END=202589178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:84:48:0,84,1260:0,115,255:40,0 chr2 202589179 . A . PASS END=202589182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:72:48:0,72,1080:0,128,255:25,0 chr2 202590079 . C . PASS END=202590177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:54:0,120,1800:0,149,255:40,0 chr2 202590183 . A . PASS END=202590183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 202591207 . C . PASS END=202591272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:51:0,120,1800:0,137,255:40,0 chr2 202591275 . G . PASS END=202591275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 202591387 . C . PASS END=202591589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:97:38:0,97,1268:0,97,255:40,0 chr2 202591591 . T . PASS END=202591591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 202591930 . C . PASS END=202591930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 202591935 . C . PASS END=202592001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:67:0,120,1800:0,169,255:40,0 chr2 202592420 . G . PASS END=202592420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 202592428 . A . PASS END=202592498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,89,255:40,0 chr2 202593235 . C . PASS END=202593237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:25,0 chr2 202593238 . G . PASS END=202593356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:28:0,81,1033:0,83,255:40,0 chr2 202593357 . A . PASS END=202593363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,1002:0,70,255:26,0 chr2 202593775 . C . PASS END=202593884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:37:0,99,1413:0,99,255:40,0 chr2 202593885 . G . PASS END=202593906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1215:0,103,255:36,0 chr2 202593907 . C . PASS END=202593907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 202593911 . A . PASS END=202593911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:36:0,72,1080:0,108,255:24,0 chr2 202597984 . T . PASS END=202597984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 202597999 . C . PASS END=202598075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:51:0,120,1800:0,141,255:40,0 chr2 202598076 . T . PASS END=202598112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:61:0,120,1800:0,153,255:40,0 chr2 202598113 . C T, 49.09 PASS DP=60;MQ=249.93;MQRankSum=6.122;ReadPosRankSum=3.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:33,27,0:0.450,0.000:60:9,15,0:24,12,0:48:84,0,50,892,1143,2035:255,0,255:31,0:4.9090e+01,7.5329e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,20,13,14:19,14,11,16 chr2 202598114 . A . PASS END=202598150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:81:46:0,81,1690:0,81,255:40,0 chr2 202598151 . T . PASS END=202598161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:44:0,102,1530:0,105,255:40,0 chr2 202603393 . A . PASS END=202603458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,178,255:40,0 chr2 202606397 . T . PASS END=202606566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:28:0,81,1158:0,84,255:40,0 chr2 202606567 . G . PASS END=202606575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 202606576 . T . PASS END=202606577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202608981 . C . PASS END=202609135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:96:40:0,96,1440:0,99,255:40,0 chr2 202609136 . C . PASS END=202609152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:24:0,66,990:0,72,255:25,0 chr2 202609154 . T . PASS END=202609154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 202611283 . G . PASS END=202611283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 202611285 . T . PASS END=202611285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,673:0,41,255:16,0 chr2 202611289 . C . PASS END=202611289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 202611290 . T . PASS END=202611297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 202611298 . G . PASS END=202611298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 202611299 . G . PASS END=202611305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,893:0,72,255:26,0 chr2 202611306 . G . PASS END=202611442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:28:0,84,1047:0,84,255:40,0 chr2 202611443 . A . PASS END=202611444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:75:36:0,75,1125:0,108,255:26,0 chr2 202611445 . G . PASS END=202611453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:34:0,81,1215:0,86,255:28,0 chr2 202611454 . T . PASS END=202611454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr2 202611455 . C . PASS END=202611456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,992:0,32,255:25,0 chr2 202611457 . A . PASS END=202611457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:26,0 chr2 202611458 . T . PASS END=202611472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,984:0,65,255:26,0 chr2 202611478 . C . PASS END=202611479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,953:0,62,255:23,0 chr2 202614419 . A . PASS END=202614419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 202614435 . C . PASS END=202614512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:65:0,120,1800:0,177,255:40,0 chr2 202617869 . C . PASS END=202617965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,120,1800:0,143,255:40,0 chr2 202619216 . T . PASS END=202619216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 202619226 . C . PASS END=202619243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:35,0 chr2 202619244 . T . PASS END=202619244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1258:0,72,255:36,0 chr2 202619245 . G . PASS END=202619370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:32:0,80,1180:0,80,255:40,0 chr2 202619371 . C . PASS END=202619395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,945:0,75,255:26,0 chr2 202619404 . A . PASS END=202619404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 202622124 . C . PASS END=202622135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,568:0,41,255:19,0 chr2 202622136 . A . PASS END=202622151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,779:0,66,255:24,0 chr2 202622152 . G . PASS END=202622157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 202622158 . G . PASS END=202622159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 202622160 . C . PASS END=202622450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,935:0,81,255:37,0 chr2 202622451 . T . PASS END=202622471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:23:0,60,900:0,68,255:25,0 chr2 202622472 . T . PASS END=202622477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,828:0,53,255:19,0 chr2 202622478 . A . PASS END=202622478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 202622479 . G . PASS END=202622481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202622482 . G . PASS END=202622482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202622489 . T . PASS END=202622489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 202625526 . T . PASS END=202625533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,674:0,44,255:19,0 chr2 202625534 . A . PASS END=202625548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 202625549 . A . PASS END=202625557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 202625558 . A . PASS END=202625558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr2 202625559 . G . PASS END=202625577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:32:0,90,1271:0,96,255:38,0 chr2 202625578 . T . PASS END=202625614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1329:0,98,255:40,0 chr2 202625615 . C T, 173.40 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,23,0:0,19,0:123:211,126,0,1612,126,1612:255,126,0:0,0:1.7340e+02,1.2340e+02,0.0000e+00,4.5000e+02,1.5817e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,21:0,0,20,22 chr2 202625616 . T . PASS END=202625652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,120,1800:0,126,255:40,0 chr2 202625653 . T . PASS END=202625926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:37:0,94,1312:0,94,255:40,0 chr2 202625927 . T . PASS END=202625927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1394:0,79,255:32,0 chr2 202625928 . C . PASS END=202626339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:81:30:0,81,1147:0,90,255:40,0 chr2 202626340 . G . PASS END=202626340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 202626341 . C . PASS END=202626348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:30,0 chr2 202626349 . C . PASS END=202626380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:36,0 chr2 202626381 . C . PASS END=202626381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:34,0 chr2 202626382 . G . PASS END=202626385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,99,1485:0,113,255:37,0 chr2 202626386 . C T, 49.80 PASS DP=43;MQ=249.08;MQRankSum=5.528;ReadPosRankSum=0.592;FractionInformativeReads=0.977;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:12,9,0:10,11,0:48:85,0,50,697,786,1483:255,0,255:19,0:4.9802e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,10,8,12:12,10,13,7 chr2 202626387 . A . PASS END=202626423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:37:0,98,1380:0,98,255:38,0 chr2 202626424 . G . PASS END=202626455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1247:0,93,255:35,0 chr2 202626456 . G . PASS END=202626456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:32,0 chr2 202626457 . G . PASS END=202626481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1133:0,80,255:33,0 chr2 202626482 . G . PASS END=202626501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:68:28:0,68,987:0,68,255:26,0 chr2 202626502 . C . PASS END=202626502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:23,0 chr2 202626503 . T . PASS END=202626508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:24,0 chr2 202626509 . A . PASS END=202626522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:45:21:0,45,675:0,47,255:18,0 chr2 202626523 . A . PASS END=202626528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:30:18:0,30,450:0,44,255:13,0 chr2 202626529 . T . PASS END=202626533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:24:19:0,24,360:0,57,255:9,0 chr2 202626534 . C . PASS END=202626534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:7,0 chr2 202626535 . T . PASS END=202626541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:10:0,21,315:0,30,255:8,0 chr2 202631952 . C . PASS END=202632086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1250:0,84,255:40,0 chr2 202632087 . A . PASS END=202632106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:25,0 chr2 202633580 . T . PASS END=202633580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 202633589 . C . PASS END=202633608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,163,255:40,0 chr2 202633639 . A . PASS END=202633639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 202645632 . T . PASS END=202645632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 202645638 . G . PASS END=202645638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202645867 . T . PASS END=202645867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1017:0,59,255:27,0 chr2 202645868 . C . PASS END=202645868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202671388 . A . PASS END=202671406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:26,0 chr2 202671407 . C . PASS END=202671416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1111:0,84,255:30,0 chr2 202671417 . A . PASS END=202671417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 202671418 . C . PASS END=202671418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 202671419 . A . PASS END=202671419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 202671420 . G . PASS END=202671423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 202671424 . G . PASS END=202671424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 202671425 . G . PASS END=202671425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 202671426 . A . PASS END=202671426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 202671427 . T . PASS END=202671449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1149:0,90,255:31,0 chr2 202671450 . G . PASS END=202671450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 202671451 . G . PASS END=202671458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 202671459 . G . PASS END=202671460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 202671461 . C . PASS END=202671463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202671464 . A . PASS END=202671487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:62:26:0,62,922:0,62,255:26,0 chr2 202671488 . A . PASS END=202671510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,681:0,41,255:18,0 chr2 202672217 . C . PASS END=202672221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:26:0,68,998:0,68,255:26,0 chr2 202672222 . A . PASS END=202672222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202672223 . G . PASS END=202672224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:71:29:0,71,1031:0,71,255:29,0 chr2 202672225 . C . PASS END=202672226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 202672227 . T . PASS END=202672227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1096:0,57,255:31,1 chr2 202672228 . A . PASS END=202672228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:61:32:0,61,1145:0,61,255:31,1 chr2 202672229 . A . PASS END=202672229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1088:0,57,255:32,0 chr2 202672230 . A . PASS END=202672232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1188:0,96,255:32,0 chr2 202672233 . A . PASS END=202672233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:29,0 chr2 202672234 . A . PASS END=202672360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:31:0,83,1126:0,83,255:40,0 chr2 202672361 . C . PASS END=202672362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 202672363 . G . PASS END=202672363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 202672364 . T . PASS END=202672364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 202672365 . G . PASS END=202672366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 202672576 . A . PASS END=202672675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:98:36:0,98,1289:0,98,255:40,0 chr2 202677206 . A . PASS END=202677285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:51:0,120,1800:0,137,255:40,0 chr2 202687532 . C . PASS END=202687535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1081:0,93,255:31,0 chr2 202687536 . T . PASS END=202687536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 202687537 . C . PASS END=202687626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:36:0,83,1351:0,83,255:40,0 chr2 202688388 . C . PASS END=202688450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:36:0,105,1575:0,108,255:40,0 chr2 202693184 . A . PASS END=202693219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:82:0,120,1800:0,222,255:40,0 chr2 202698571 . C . PASS END=202698571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:29,0 chr2 202698572 . T . PASS END=202698680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:30:0,90,996:0,90,255:40,0 chr2 202698681 . A . PASS END=202698681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,4:37:44:37:0,44,951:0,44,255:32,0 chr2 202698682 . C . PASS END=202698694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1256:0,92,255:35,0 chr2 202700366 . G . PASS END=202700472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:34:0,81,1215:0,87,255:40,0 chr2 202700473 . G . PASS END=202700482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:28:0,66,990:0,83,255:26,0 chr2 202700483 . T . PASS END=202700486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:28:0,48,720:0,84,255:19,0 chr2 202712104 . G . PASS END=202712132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,120,1800:0,125,255:40,0 chr2 202712133 . T . PASS END=202712197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:39:0,101,1402:0,101,255:40,0 chr2 202719597 . G . PASS END=202719660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,122,255:40,0 chr2 202721014 . C . PASS END=202721039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:39:0,96,1386:0,96,255:40,0 chr2 202737001 . A . PASS END=202737018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:36:0,85,1319:0,85,255:39,0 chr2 202737019 . C . PASS END=202737019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1434:0,68,255:33,0 chr2 202737020 . G . PASS END=202737049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:38:0,96,1366:0,100,255:40,0 chr2 202744751 . G . PASS END=202744753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 202744754 . G . PASS END=202744755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 202744756 . G . PASS END=202744757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 202744758 . A . PASS END=202744758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr2 202744759 . G . PASS END=202744855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:28:0,84,995:0,84,255:40,0 chr2 202744856 . C . PASS END=202744856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:34,0 chr2 202744857 . G . PASS END=202744878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,95,255:35,0 chr2 202744879 . A . PASS END=202744890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 202746988 . T . PASS END=202746990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,181,255:40,0 chr2 202746991 . C . PASS END=202747028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:62:0,120,1800:0,157,255:40,0 chr2 202753183 . A . PASS END=202753187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:65:0,120,1800:0,178,255:40,0 chr2 202755508 . A . PASS END=202755617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:35:0,88,1173:0,88,255:40,0 chr2 202899371 . A . PASS END=202899380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 202899381 . C . PASS END=202899381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 202899382 . C . PASS END=202899413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr2 202899414 . T . PASS END=202899417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 202899418 . T . PASS END=202899418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 202899419 . G . PASS END=202899432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,582:0,48,255:17,0 chr2 202899433 . G . PASS END=202899433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 202899434 . C . PASS END=202899471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:17:0,47,629:0,47,255:19,0 chr2 202899472 . G . PASS END=202899473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202899474 . A . PASS END=202899474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 202899475 . C . PASS END=202899486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:25,0 chr2 202899487 . G . PASS END=202899602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:30:0,80,1111:0,80,255:40,0 chr2 202899603 . A . PASS END=202899603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1325:0,75,255:36,0 chr2 202899604 . C . PASS END=202899623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1372:0,98,255:37,0 chr2 202899624 . A . PASS END=202899624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 202899625 . G . PASS END=202899634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:27,0 chr2 202899635 . C . PASS END=202899674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,853:0,66,255:26,0 chr2 202899675 . T . PASS END=202899690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 202899691 . G . PASS END=202899693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,60,255:13,0 chr2 202899694 . C . PASS END=202899746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,53,255:19,0 chr2 202899747 . G . PASS END=202899762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:22,0 chr2 202899763 . C . PASS END=202899763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 202899764 . G . PASS END=202899767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr2 202899768 . C . PASS END=202899768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:20,0 chr2 202899769 . G . PASS END=202899826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:21:0,62,754:0,62,255:26,0 chr2 202899827 . G . PASS END=202899830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202899831 . A . PASS END=202899833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 202899834 . G . PASS END=202899835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 202899836 . G . PASS END=202899838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 202899839 . G . PASS END=202899839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:25,0 chr2 202899840 . G . PASS END=202899846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,979:0,73,255:26,0 chr2 202899847 . C . PASS END=202899869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1082:0,80,255:31,0 chr2 202899870 . A . PASS END=202899870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 202899871 . C . PASS END=202899873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:32,0 chr2 202899874 . C . PASS END=202899874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:31,0 chr2 202899875 . T . PASS END=202899905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1180:0,83,255:34,0 chr2 202899906 . A . PASS END=202899906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1113:0,68,255:29,0 chr2 202899907 . C . PASS END=202899913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1224:0,83,255:31,0 chr2 202899914 . G . PASS END=202899914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:29,0 chr2 202899915 . C . PASS END=202899915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 202899916 . G . PASS END=202899929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1185:0,80,255:31,0 chr2 202899930 . A . PASS END=202899965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,60,255:26,0 chr2 202899966 . A . PASS END=202899983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,675:0,44,255:19,0 chr2 202899984 . C . PASS END=202899984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:17,0 chr2 202899985 . C . PASS END=202899996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,49,255:19,0 chr2 202899997 . A . PASS END=202899997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:16,1 chr2 202899998 . T . PASS END=202899998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:28:21:0,28,688:0,28,255:17,1 chr2 202899999 . G . LowGQ END=202899999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:0:22:0,0,627:6,0,255:16,0 chr2 202900000 . C . PASS END=202900053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:19,0 chr2 202900054 . C . PASS END=202900054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 202900055 . G . PASS END=202900102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,574:0,48,255:17,0 chr2 202900103 . T . PASS END=202900103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 202900104 . T . PASS END=202900119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,545:0,48,255:16,0 chr2 202900120 . G . PASS END=202900120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,496:0,31,255:13,0 chr2 202900121 . C . PASS END=202900132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 202900133 . C . PASS END=202900136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 202900137 . G . PASS END=202900137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr2 202900138 . G . PASS END=202900138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 202900139 . G . PASS END=202900139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 202900140 . T . PASS END=202900141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,565:0,32,255:13,0 chr2 202900142 . G . PASS END=202900147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:16,0 chr2 202900148 . T . PASS END=202900148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 202900149 . G . PASS END=202900183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,529:0,45,255:18,0 chr2 202900184 . G . PASS END=202900184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:14,0 chr2 202900185 . T . PASS END=202900196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 202900197 . T . PASS END=202900197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 202900198 . G . PASS END=202900283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,515:0,45,255:16,0 chr2 202900284 . C . PASS END=202900288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 202900289 . T . PASS END=202900290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 202900291 . C . PASS END=202900306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 202900307 . G . PASS END=202900307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 202900308 . C . PASS END=202900323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 202900324 . C . PASS END=202900325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 202900326 . T . PASS END=202900326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 202900327 . C . PASS END=202900369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:15,0 chr2 202900370 . G . PASS END=202900371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 202900372 . G . PASS END=202900381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 202900382 . A . PASS END=202900382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr2 202900383 . T . PASS END=202900401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 202900402 . C . PASS END=202900406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 202900407 . T . PASS END=202900409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202900410 . G . PASS END=202900432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,821:0,63,255:22,0 chr2 202900433 . G . PASS END=202900433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 202900434 . T . PASS END=202900435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 202900436 . A . PASS END=202900436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 202900437 . T . PASS END=202900437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 202900438 . T . PASS END=202900442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 202900443 . C . PASS END=202900448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 202900449 . C . PASS END=202900449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 202900450 . T . PASS END=202900450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202900451 . T . PASS END=202900508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,615:0,51,255:19,0 chr2 202900509 . A . PASS END=202900509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 202900510 . C . PASS END=202900511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 202900512 . T . PASS END=202900517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 202900518 . T . PASS END=202900518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 202900519 . G . PASS END=202900520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 202900521 . C . PASS END=202900525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 202900526 . T . PASS END=202900545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 202900546 . G . PASS END=202900546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 202900547 . A . PASS END=202900550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 202900551 . T . PASS END=202900554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 202900555 . T . PASS END=202900555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:13,0 chr2 202900556 . A . PASS END=202900604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,592:0,51,255:19,0 chr2 202900605 . A . PASS END=202900608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202900609 . T . PASS END=202900654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,531:0,41,255:19,0 chr2 202900655 . C . PASS END=202900656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:21,0 chr2 202900657 . G . PASS END=202900657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 202900658 . T . PASS END=202900661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 202900662 . T . PASS END=202900662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr2 202900663 . C . PASS END=202900677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 202900678 . C . PASS END=202900678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 202900679 . A . PASS END=202900712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:25,0 chr2 202900713 . T . PASS END=202900713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 202900714 . C . PASS END=202900765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,848:0,61,255:25,0 chr2 202900766 . A . PASS END=202900766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 202900767 . A . PASS END=202900768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:24,0 chr2 202900769 . C . PASS END=202900769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:22,0 chr2 202900770 . T . PASS END=202900777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,900:0,61,255:25,0 chr2 202900778 . C . PASS END=202900778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 202900779 . G . PASS END=202900779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 202900780 . C . PASS END=202900782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,876:0,44,255:24,0 chr2 202900783 . C . PASS END=202900786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 202900787 . G . PASS END=202900788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:41:24:0,41,829:0,41,255:23,0 chr2 202900789 . C . PASS END=202900790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 202900791 . T . PASS END=202900792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr2 202900793 . A . PASS END=202900795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:25,0 chr2 202900796 . G . PASS END=202900799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:26:0,42,630:0,65,255:15,0 chr2 202900800 . T . PASS END=202900805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:39:27:0,39,585:0,65,255:13,0 chr2 202900806 . C . PASS END=202900806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,630:0,81,255:14,0 chr2 202900807 . A . PASS END=202900807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 202900808 . G . PASS END=202900814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr2 202900815 . C . PASS END=202900816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 202900817 . A . PASS END=202900818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 202900819 . C . PASS END=202900819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 202900820 . A . PASS END=202900820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:14,0 chr2 202900821 . T . PASS END=202900825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 202900826 . C . PASS END=202900826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:10,0 chr2 202900827 . T . PASS END=202900828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 202900829 . G . PASS END=202900829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:9,0 chr2 202900830 . C . PASS END=202900835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 202900836 . A . PASS END=202900836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 202900837 . C . PASS END=202900847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr2 202900848 . A . PASS END=202900848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,347:0,17,255:10,0 chr2 202900849 . G . PASS END=202900866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr2 202900867 . G . PASS END=202900867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 202900868 . G . PASS END=202900868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 202900869 . A . PASS END=202900869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 202900870 . G . PASS END=202900873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 202900874 . A . PASS END=202900874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,424:0,9,255:10,0 chr2 202900875 . C . PASS END=202900900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 202900901 . T . PASS END=202900901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 202900902 . A . PASS END=202900902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 202900903 . T . PASS END=202900903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 202900904 . G . PASS END=202900910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 202900911 . C . PASS END=202900911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 202900912 . C . PASS END=202900912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 202900913 . T . PASS END=202900913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 202900914 . G . PASS END=202900971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,637:0,51,255:19,0 chr2 202900972 . C . PASS END=202901029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,764:0,65,255:26,0 chr2 202901030 . C . PASS END=202901035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202901036 . T . PASS END=202901066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,64,255:26,0 chr2 202901067 . A . PASS END=202901067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:19,0 chr2 202901068 . C . PASS END=202901073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 202901074 . C . PASS END=202901080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 202901081 . G . PASS END=202901095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 202938351 . A . PASS END=202938395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:86:31:0,86,1140:0,86,255:38,0 chr2 202938396 . C . PASS END=202938396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:35,0 chr2 202938397 . A . PASS END=202938430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:33:0,92,1139:0,92,255:36,0 chr2 202938431 . A . PASS END=202938431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:29,0 chr2 202938432 . G . PASS END=202938434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 202939614 . G . PASS END=202939614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 202939615 . A . PASS END=202939618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 202939619 . C . PASS END=202939628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,784:0,63,255:24,0 chr2 202939629 . A . PASS END=202939629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 202939630 . G . PASS END=202939630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 202939631 . G . PASS END=202939631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:21,0 chr2 202939632 . T . PASS END=202939636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,925:0,64,255:24,0 chr2 202939637 . A . PASS END=202939637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,953:0,50,255:24,0 chr2 202939638 . G . PASS END=202939644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 202939645 . A . PASS END=202939655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1080:0,84,255:29,0 chr2 202939656 . A . PASS END=202939656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 202939657 . G . PASS END=202939659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:30,0 chr2 202939660 . A . PASS END=202939660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 202939661 . A . PASS END=202939668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,943:0,87,255:36,0 chr2 202939669 . A . PASS END=202939669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1213:0,72,255:36,0 chr2 202939670 . T . PASS END=202939856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1109:0,80,255:40,0 chr2 202939857 . C . PASS END=202939882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,62,255:26,0 chr2 202939883 . A . PASS END=202939884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 202939885 . A . PASS END=202939885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:17,0 chr2 202939886 . T . PASS END=202939888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 202939889 . A . PASS END=202939889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:18,0 chr2 202939890 . A . PASS END=202939898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:50:19:0,50,765:0,50,255:19,0 chr2 202941655 . T . PASS END=202941805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:34:0,81,1215:0,86,255:40,0 chr2 202941806 . A . PASS END=202941822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:25:0,69,1035:0,71,255:26,0 chr2 202955493 . G . PASS END=202955642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:29:0,81,1215:0,87,255:40,0 chr2 202955643 . T . PASS END=202955651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:26,0 chr2 202955652 . G . PASS END=202955652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:20,0 chr2 202957753 . G . PASS END=202957908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:39:0,84,1260:0,84,255:40,0 chr2 202962158 . G . PASS END=202962177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 202962178 . G . PASS END=202962178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 202962179 . G . PASS END=202962180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 202962181 . G . PASS END=202962181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 202962182 . A . PASS END=202962215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:31:0,93,1149:0,93,255:39,0 chr2 202962216 . T . PASS END=202962216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1256:0,70,255:35,0 chr2 202962217 . C . PASS END=202962262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,87,255:39,0 chr2 202962263 . G . PASS END=202962264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:34:0,72,1080:0,85,255:24,0 chr2 202962265 . A . PASS END=202962271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:32:0,60,900:0,80,255:23,0 chr2 202962272 . C . PASS END=202962285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:24:0,42,630:0,58,255:18,0 chr2 202962286 . G . PASS END=202962291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,495:0,41,255:12,0 chr2 202962292 . C . PASS END=202962292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:27:24:0,27,405:0,72,255:9,0 chr2 202962293 . A . PASS END=202962300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:12:22:0,12,180:0,35,255:6,0 chr2 202964336 . G . PASS END=202964342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:86:31:0,86,1133:0,86,255:33,0 chr2 202964343 . C . PASS END=202964379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1160:0,85,255:36,0 chr2 202964380 . G A, 154.43 PASS DP=37;MQ=250.00;FractionInformativeReads=0.973 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,19,0:0,17,0:104:192,107,0,1337,107,1337:255,108,0:0,0:1.5443e+02,1.0443e+02,0.0000e+00,4.5000e+02,1.3920e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,13:0,0,18,18 chr2 202964381 . A . PASS END=202964417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1339:0,95,255:37,0 chr2 202964418 . C . PASS END=202964453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:84:30:0,84,1260:0,89,255:36,0 chr2 202964454 . C . PASS END=202964454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 202964455 . A . PASS END=202964457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 202964458 . T . PASS END=202964458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 202964459 . G . PASS END=202964464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 202964465 . T . PASS END=202964465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 202964466 . C . PASS END=202964467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr2 202964468 . C . PASS END=202964478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:25,0 chr2 202964479 . C . PASS END=202964490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:21:0,51,765:0,63,255:19,0 chr2 202964491 . C . PASS END=202964502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 202964503 . G . PASS END=202964519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 202965030 . A . PASS END=202965138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:87:35:0,87,1281:0,97,255:40,0 chr2 202965139 . A . PASS END=202965139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:28,0 chr2 202965140 . A . PASS END=202965149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,93,255:30,0 chr2 202965150 . C . PASS END=202965155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 202965156 . A . PASS END=202965158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 202965159 . T . PASS END=202965160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1072:0,76,255:27,0 chr2 202965161 . A . PASS END=202965161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,947:0,54,255:25,0 chr2 202965162 . A . PASS END=202965165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 202965166 . G . PASS END=202965166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 202965167 . A . PASS END=202965169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 202965170 . A . PASS END=202965170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,968:0,70,255:27,0 chr2 202965171 . A . PASS END=202965172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202967669 . G . PASS END=202967680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1141:0,88,255:35,0 chr2 202967681 . T . PASS END=202967681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:33,0 chr2 202967682 . T . PASS END=202967829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:32:0,84,1218:0,89,255:40,0 chr2 202967830 . C . PASS END=202967837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,74,255:25,0 chr2 202970484 . G . PASS END=202970484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 202970485 . T . PASS END=202970485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 202970486 . G . PASS END=202970486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202970487 . C . PASS END=202970519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:22,0 chr2 202970520 . A . PASS END=202970520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 202970521 . A . PASS END=202970535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,800:0,65,255:26,0 chr2 202970536 . G . PASS END=202970538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202970539 . G . PASS END=202970540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 202970541 . G . PASS END=202970543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202970544 . C . PASS END=202970545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 202970546 . C . PASS END=202970552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 202970553 . A . PASS END=202970553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 202970554 . G . PASS END=202970555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:29,0 chr2 202970556 . A . PASS END=202970556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 202970557 . T . PASS END=202970575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:30,0 chr2 202970576 . T . PASS END=202970576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 202970577 . G . PASS END=202970616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:31:0,93,1180:0,93,255:35,0 chr2 202970617 . C . PASS END=202970617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1250:0,72,255:33,0 chr2 202970618 . A . PASS END=202970619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 202970620 . A . PASS END=202970620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:34,0 chr2 202970621 . C . PASS END=202970656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1105:0,90,255:35,0 chr2 202970657 . T . PASS END=202970657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 202970658 . C . PASS END=202970661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 202970662 . C . PASS END=202970681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr2 202970682 . G . PASS END=202970684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 202970685 . G . PASS END=202970685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 202970686 . C . PASS END=202970689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 202970690 . G . PASS END=202970702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,81,255:25,0 chr2 202970703 . G . PASS END=202970703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 202970704 . G . PASS END=202970706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:26:0,60,900:0,61,255:20,0 chr2 202970707 . C . PASS END=202970738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,621:0,40,255:19,0 chr2 202974336 . A . PASS END=202974360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 202974361 . G . PASS END=202974374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 202974375 . A . PASS END=202974395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 202974396 . G . PASS END=202974396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,1 chr2 202974397 . A . PASS END=202974397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:13:16:0,13,547:0,13,255:15,1 chr2 202974398 . A . PASS END=202974398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:16,0 chr2 202974399 . A . PASS END=202974414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:19,0 chr2 202974415 . C . PASS END=202974419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 202974420 . A . PASS END=202974421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 202974422 . G . PASS END=202974432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:26,0 chr2 202974433 . C . PASS END=202974438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 202974439 . G . PASS END=202974492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,884:0,63,255:25,0 chr2 202974493 . G . PASS END=202974512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,676:0,43,255:19,0 chr2 202978059 . A . PASS END=202978061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 202978062 . A . PASS END=202978062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:23,0 chr2 202978063 . T . PASS END=202978070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 202978071 . A . PASS END=202978081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1156:0,93,255:34,0 chr2 202978082 . G . PASS END=202978082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:31,0 chr2 202978083 . G . PASS END=202978155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1142:0,88,255:37,0 chr2 202978156 . T . PASS END=202978169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,92,255:32,0 chr2 202989937 . C . PASS END=202990005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,114,1710:0,114,255:40,0 chr2 202995316 . A . PASS END=202995323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,156,255:40,0 chr2 202995324 . G . PASS END=202995347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,144,255:40,0 chr2 203003155 . C . PASS END=203003231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:66:0,120,1800:0,174,255:40,0 chr2 203019396 . G . PASS END=203019396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 203019397 . G . PASS END=203019398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 203019399 . G . PASS END=203019399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:28,0 chr2 203019400 . C . PASS END=203019533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:30:0,86,1072:0,86,255:40,0 chr2 203030007 . G . PASS END=203030079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,114,1710:0,122,255:40,0 chr2 203049476 . A . PASS END=203049548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:34:0,102,1179:0,102,255:40,0 chr2 203049549 . A . PASS END=203049549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1349:0,70,255:35,0 chr2 203049550 . G . PASS END=203049566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:37:0,93,1304:0,97,255:37,0 chr2 203050426 . G . PASS END=203050459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:87:40:0,87,1305:0,96,255:40,0 chr2 203050460 . G . LowGQ END=203050461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,14:54:0:52:0,0,896:255,0,255:40,17 chr2 203050462 . A . PASS END=203050462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1823:0,79,255:40,0 chr2 203050463 . A . PASS END=203050511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,106,1264:0,106,255:40,0 chr2 203050512 . C . PASS END=203050569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,102,1556:0,102,255:40,0 chr2 203050570 . G . PASS END=203050585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:33:0,66,990:0,83,255:24,0 chr2 203051656 . G . PASS END=203051656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 203051657 . G . PASS END=203051666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:26,0 chr2 203051667 . A . PASS END=203051667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 203051668 . T . PASS END=203051668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 203051669 . G . PASS END=203051804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:29:0,87,1049:0,87,255:40,0 chr2 203051805 . C . PASS END=203051805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:31,0 chr2 203051806 . A . PASS END=203051821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,99,255:32,0 chr2 203052875 . G . PASS END=203052960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:41:0,110,1474:0,110,255:40,0 chr2 203052961 . G . LowGQ END=203052961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,8:56:0:56:0,0,1347:2,0,255:40,0 chr2 203052962 . G . PASS END=203052989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:53:0,85,1620:0,85,255:40,0 chr2 203054897 . G . PASS END=203054918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,113,1691:0,113,255:40,0 chr2 203054919 . T . PASS END=203054919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:49:55:0,49,1809:0,49,255:40,4 chr2 203054920 . A . LowGQ END=203054920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,5:56:0:56:0,0,1723:9,0,255:40,5 chr2 203054921 . A . PASS END=203054921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:10:55:0,10,1754:0,10,255:40,0 chr2 203054922 . A . PASS END=203055206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:32:0,80,1101:0,80,255:40,2 chr2 203055207 . C . PASS END=203055213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,70,255:25,0 chr2 203055214 . A . PASS END=203055216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,71,255:19,0 chr2 203058024 . G . PASS END=203058025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 203058026 . C . PASS END=203058026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 203058027 . C . PASS END=203058029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1072:0,84,255:31,0 chr2 203058030 . C . PASS END=203058030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 203058031 . T . PASS END=203058226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:87:31:0,87,1172:0,93,255:40,0 chr2 203058913 . C . PASS END=203058915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 203058916 . G . PASS END=203059056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,994:0,81,255:40,0 chr2 203059057 . A . PASS END=203059057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:40,0 chr2 203059058 . A . PASS END=203059085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:36:0,83,1254:0,83,255:40,0 chr2 203061523 . A . PASS END=203061524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,908:0,72,255:24,0 chr2 203061525 . G . PASS END=203061525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,798:0,39,255:22,0 chr2 203061526 . C . PASS END=203061527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,781:0,72,255:24,0 chr2 203061528 . G . PASS END=203061528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,843:0,42,255:23,0 chr2 203061529 . A . PASS END=203061532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,820:0,75,255:26,0 chr2 203061533 . G . PASS END=203061533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,839:0,26,255:25,0 chr2 203061534 . C . PASS END=203061543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,820:0,80,255:29,0 chr2 203061544 . A . PASS END=203061544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr2 203061545 . G . PASS END=203061549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 203061550 . T . PASS END=203061552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:30,0 chr2 203061553 . A . PASS END=203061750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1082:0,83,255:40,0 chr2 203061751 . T . PASS END=203061756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,1084:0,63,255:26,0 chr2 203061757 . G . PASS END=203061757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 203061758 . G . PASS END=203061773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:27:0,75,1125:0,81,255:26,0 chr2 203067152 . G . PASS END=203067176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:32:0,88,956:0,88,255:37,0 chr2 203067177 . T C, 160.89 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,17,0:0,21,0:111:199,114,0,299,299,299:255,114,0:0,0:1.6089e+02,1.1089e+02,0.0000e+00,2.9566e+02,3.3043e+02,2.9867e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,16:0,0,21,17 chr2 203067178 . T . PASS END=203067214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,110,1528:0,110,255:40,0 chr2 203067215 . C . PASS END=203067283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:36:0,81,1215:0,92,255:40,0 chr2 203067284 . G . PASS END=203067284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 203067285 . C . PASS END=203067287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,91,255:27,0 chr2 203067288 . T . PASS END=203067290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:33:0,75,1125:0,83,255:25,0 chr2 203070938 . G . PASS END=203070938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,105,1627:0,105,255:40,0 chr2 203071032 . C . PASS END=203071032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1296:0,102,255:34,0 chr2 203071092 . T . PASS END=203071092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,193,255:40,0 chr2 203071162 . C . PASS END=203071162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,160,255:40,0 chr2 203071200 . T . PASS END=203071200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 203071223 . G . PASS END=203071223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 203071252 . T . PASS END=203071252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 203071976 . C . PASS END=203072044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:64:0,120,1800:0,148,255:40,0 chr2 203075458 . T . PASS END=203075529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:60:0,120,1800:0,150,255:40,0 chr2 203079080 . C . PASS END=203079081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:22,0 chr2 203079082 . G . PASS END=203079082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 203079083 . T . PASS END=203079084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:26,0 chr2 203079085 . T . PASS END=203079089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,970:0,67,255:26,0 chr2 203079090 . C . PASS END=203079090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr2 203079091 . A . PASS END=203079091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 203079092 . G . PASS END=203079093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:32,0 chr2 203079094 . A . PASS END=203079094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1074:0,60,255:32,0 chr2 203079095 . T . PASS END=203079096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1125:0,82,255:32,0 chr2 203079097 . A . PASS END=203079097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:29:33:0,29,1019:0,29,255:31,0 chr2 203079098 . T . PASS END=203079152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1164:0,80,255:35,0 chr2 203079153 . C . PASS END=203079157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:34:0,69,1035:0,86,255:24,0 chr2 203079165 . G . PASS END=203079165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 203079167 . T . PASS END=203079167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 203084755 . C . PASS END=203084829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:55:0,120,1800:0,155,255:40,0 chr2 203096336 . G . PASS END=203096339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1050:0,82,255:30,0 chr2 203096340 . C . PASS END=203096340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:1:32:0,1,798:0,1,255:28,0 chr2 203096341 . T . PASS END=203096341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:30,0 chr2 203096342 . C . PASS END=203096343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1150:0,63,255:32,0 chr2 203096344 . G . PASS END=203096344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 203096345 . T . PASS END=203096345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1072:0,47,255:31,0 chr2 203096346 . C . PASS END=203096346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1210:0,71,255:32,0 chr2 203096347 . T . PASS END=203096347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1255:0,86,255:31,0 chr2 203096348 . C . PASS END=203096349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:33,1 chr2 203096350 . A . PASS END=203096350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 203096351 . A . PASS END=203096352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:33,0 chr2 203096353 . A . PASS END=203096353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 203096354 . A . PASS END=203096354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:33,0 chr2 203096355 . A . PASS END=203096355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 203096356 . A . PASS END=203096356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:33,0 chr2 203096357 . A . PASS END=203096357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1217:0,86,255:32,0 chr2 203096358 . A . PASS END=203096359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1150:0,66,255:34,0 chr2 203096360 . A . PASS END=203096361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1219:0,88,255:33,0 chr2 203096362 . T . PASS END=203096362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1239:0,67,255:33,0 chr2 203096363 . A . PASS END=203096364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 203096365 . C . PASS END=203096365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1225:0,66,255:33,0 chr2 203096366 . G . PASS END=203096366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 203096367 . G . PASS END=203096367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:33,0 chr2 203096368 . C . PASS END=203096368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1091:0,52,255:33,0 chr2 203096369 . C . PASS END=203096369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1286:0,70,255:33,0 chr2 203096370 . T . PASS END=203096371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1022:0,52,255:32,0 chr2 203096372 . T . PASS END=203096372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1234:0,69,255:33,0 chr2 203096373 . C . PASS END=203096373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1172:0,50,255:32,0 chr2 203096374 . T . PASS END=203096377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1229:0,66,255:34,0 chr2 203096378 . T . PASS END=203096378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1105:0,52,255:33,0 chr2 203096379 . T . PASS END=203096380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1256:0,69,255:34,0 chr2 203096381 . A . PASS END=203096381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1194:0,50,255:33,0 chr2 203096382 . T . PASS END=203096382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:34,0 chr2 203096383 . C . PASS END=203096383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1127:0,50,255:33,0 chr2 203096384 . T . PASS END=203096385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:36:0,73,1296:0,73,255:35,0 chr2 203096386 . C . PASS END=203096386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 203096387 . C . PASS END=203096388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:36,0 chr2 203096389 . T . PASS END=203096389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 203096390 . C . PASS END=203096390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:35,0 chr2 203096391 . A . PASS END=203096392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 203096393 . G . PASS END=203096393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:32,0 chr2 203096394 . G . PASS END=203096400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:39:0,81,1427:0,81,255:34,0 chr2 203096401 . C . PASS END=203096401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:34,0 chr2 203096402 . T . PASS END=203096405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,102,1530:0,108,255:34,0 chr2 203096406 . C . PASS END=203096407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:66:35:0,66,1241:0,66,255:34,0 chr2 203096408 . C . PASS END=203096408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 203096409 . C . PASS END=203096410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:29,0 chr2 203096411 . C . PASS END=203096412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 203096413 . T . PASS END=203096413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1097:0,50,255:27,0 chr2 203096414 . C . PASS END=203096420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1305:0,89,255:30,0 chr2 203096421 . T . PASS END=203096428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1023:0,74,255:26,0 chr2 203096429 . C . PASS END=203096434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:28,0 chr2 203096435 . A . PASS END=203096455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,65,255:26,0 chr2 203103163 . C . PASS END=203103174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,113,1678:0,113,255:40,0 chr2 203103222 . G . PASS END=203103222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 203130665 . A . PASS END=203130666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 203130667 . G . PASS END=203130672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,581:0,46,255:19,0 chr2 203130673 . G . PASS END=203130683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,705:0,60,255:20,0 chr2 203130684 . C . PASS END=203130689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 203130690 . T . PASS END=203130707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 203130708 . A . PASS END=203130709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,676:0,46,255:19,0 chr2 203139836 . G . PASS END=203139843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,190,255:40,0 chr2 203139844 . T C, 50.00 PASS DP=77;MQ=250.00;MQRankSum=7.529;ReadPosRankSum=3.711;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,41,0:0.532,0.000:77:20,22,0:16,19,0:48:85,0,50,1397,1242,2640:255,0,255:36,0:5.0000e+01,6.7045e-05,5.2632e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,13,22,19:15,21,25,16 chr2 203139845 . G . PASS END=203139881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:77:0,120,1800:0,207,255:40,0 chr2 203139882 . A . PASS END=203139912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,2:87:99:84:0,120,1800:0,227,255:40,0 chr2 203142673 . A . PASS END=203142690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:108,2:110:99:106:0,120,1800:0,255,255:40,0 chr2 203142691 . T . PASS END=203142725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:94:0,120,1800:0,244,255:40,0 chr2 203142935 . G . PASS END=203142966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,153,255:40,0 chr2 203147074 . C . PASS END=203147077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:49:18:0,49,601:0,49,255:21,0 chr2 203147078 . C . PASS END=203147081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,861:0,69,255:24,0 chr2 203147082 . G . PASS END=203147082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 203147083 . C . PASS END=203147084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 203147085 . C . PASS END=203147195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1033:0,85,255:40,0 chr2 203149068 . G . PASS END=203149068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 203149069 . A . PASS END=203149069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:27,0 chr2 203149070 . A . PASS END=203149072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 203149073 . G . PASS END=203149073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr2 203149074 . C . PASS END=203149078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 203149079 . T . PASS END=203149079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1025:0,66,255:31,0 chr2 203149080 . C . PASS END=203149195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:32:0,81,1215:0,91,255:40,0 chr2 203149196 . G . PASS END=203149197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 203149198 . C . PASS END=203149199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 203149200 . C . PASS END=203149204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 203152383 . C . PASS END=203152392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,155,255:40,0 chr2 203152393 . T . PASS END=203152447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,133,255:40,0 chr2 203155046 . C . PASS END=203155061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:36:0,97,1206:0,97,255:38,0 chr2 203155062 . G . PASS END=203155180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:96:40:0,96,1425:0,96,255:40,0 chr2 203155848 . G . PASS END=203155898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:34:0,95,1235:0,95,255:40,0 chr2 203155899 . A . PASS END=203155935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,143,255:40,0 chr2 203155936 . A C, 49.14 PASS DP=52;MQ=250.00;MQRankSum=6.086;ReadPosRankSum=1.353;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:28,23,0:0.451,0.000:51:19,14,0:9,9,0:48:84,0,50,762,938,1700:255,0,255:23,0:4.9138e+01,7.4811e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,16,11,12:15,13,12,11 chr2 203155937 . A . PASS END=203155973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:40:0,87,1204:0,87,255:40,0 chr2 203155974 . T . PASS END=203155993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:36:0,96,1263:0,97,255:35,0 chr2 203157500 . G . PASS END=203157623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:42:0,96,1440:0,101,255:40,0 chr2 203157624 . C . PASS END=203157625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:78:40:0,78,1170:0,104,255:26,0 chr2 203157626 . G . PASS END=203157626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr2 203160397 . G . PASS END=203160401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr2 203160402 . C . PASS END=203160403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 203160404 . T . PASS END=203160412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 203160413 . G . PASS END=203160414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 203160415 . C . PASS END=203160416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,968:0,67,255:27,0 chr2 203160417 . A . PASS END=203160418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:30,0 chr2 203160419 . G . PASS END=203160419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr2 203160420 . C . PASS END=203160433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1066:0,93,255:34,0 chr2 203160434 . C . PASS END=203160434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:32,0 chr2 203160435 . G . PASS END=203160467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:34:0,88,1085:0,88,255:35,0 chr2 203160468 . A . PASS END=203160468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 203160469 . G . PASS END=203160489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1158:0,85,255:33,0 chr2 203160490 . A . PASS END=203160499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:32:0,72,1080:0,79,255:26,0 chr2 203160500 . G . PASS END=203160501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,86,255:27,0 chr2 203160502 . A . PASS END=203160521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,65,255:26,0 chr2 203160522 . T . PASS END=203160522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 203160523 . C . PASS END=203160552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,695:0,60,255:21,0 chr2 203160553 . A . PASS END=203160559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,607:0,43,255:19,0 chr2 203160560 . G . PASS END=203160560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:13,0 chr2 203162102 . A . PASS END=203162236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:32:0,83,1135:0,83,255:40,0 chr2 203162568 . A . PASS END=203162629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:82:0,120,1800:0,228,255:40,0 chr2 203164957 . T . PASS END=203164959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 203164960 . A . PASS END=203165090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:28:0,84,1047:0,84,255:40,0 chr2 203167644 . T . PASS END=203167780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:117,1:118:99:58:0,110,1782:0,110,255:40,2 chr2 203168109 . A . PASS END=203168159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:86:0,120,1800:0,224,255:40,0 chr2 203241084 . A . PASS END=203241084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 203241169 . G . PASS END=203241169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,607:0,8,255:18,0 chr2 203241234 . A . PASS END=203241234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:17,0 chr2 203241445 . C . PASS END=203241445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr2 203241496 . C . PASS END=203241496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 203241604 . A . PASS END=203241604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 203241623 . A . PASS END=203241623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 203241764 . G . PASS END=203241764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 203241773 . G . PASS END=203241773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 203241791 . G . PASS END=203241791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 203241854 . G . PASS END=203241854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 203241885 . G . PASS END=203241885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 203242128 . G . PASS END=203242128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1435:0,114,255:38,0 chr2 203242198 . A . PASS END=203242232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1125:0,80,255:39,0 chr2 203242233 . C . PASS END=203242273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:21:0,60,900:0,62,255:26,0 chr2 203242274 . G . PASS END=203242275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:21:0,42,630:0,63,255:15,0 chr2 203242278 . G . PASS END=203242278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 203329495 . T . PASS END=203329495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr2 203329531 . G . PASS END=203329706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,148,255:40,0 chr2 203329708 . T . PASS END=203329708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 203331650 . T . PASS END=203331650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 203332237 . T . PASS END=203332237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 203332239 . T . PASS END=203332249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1039:0,80,255:33,0 chr2 203332250 . T . PASS END=203332250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr2 203332251 . C . PASS END=203332410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:33:0,81,1215:0,97,255:40,0 chr2 203332411 . C . PASS END=203332415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:77:31:0,77,1170:0,77,255:26,0 chr2 203332417 . G . PASS END=203332417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 203378398 . C . PASS END=203378398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr2 203378432 . T . PASS END=203378432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:88:0,120,1800:0,255,255:40,0 chr2 203378442 . G . PASS END=203378554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:39:0,111,1665:0,117,255:40,0 chr2 203379611 . G . PASS END=203379620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,107,1451:0,107,255:40,0 chr2 203379621 . A . PASS END=203379621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1023:0,56,255:37,0 chr2 203379622 . C . PASS END=203379703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,115,1553:0,115,255:40,0 chr2 203383544 . G . PASS END=203383544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 203383545 . C . PASS END=203383548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,996:0,81,255:29,0 chr2 203383549 . T . PASS END=203383549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 203383550 . T . PASS END=203383551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1057:0,87,255:29,0 chr2 203383552 . G . PASS END=203383552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 203383553 . C . PASS END=203383553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:27,0 chr2 203383554 . C . PASS END=203383555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 203383556 . A . PASS END=203383557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:71:29:0,71,1016:0,71,255:31,0 chr2 203383558 . G . PASS END=203383725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:33:0,81,1141:0,82,255:40,0 chr2 203383726 . C . PASS END=203383745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,72,255:26,0 chr2 203383746 . T . PASS END=203383746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:20,0 chr2 203383747 . A . PASS END=203383755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 203383756 . T . PASS END=203383776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:18,0 chr2 203384087 . A . PASS END=203384087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:28,0 chr2 203384808 . A . PASS END=203384808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:83:46:0,83,1553:0,83,255:40,0 chr2 203384809 . G . PASS END=203384809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1615:0,72,255:40,0 chr2 203384810 . G . PASS END=203384827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:48:0,106,1715:0,106,255:40,0 chr2 203384828 . T . PASS END=203384918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:43:0,105,1575:0,129,255:40,0 chr2 203384919 . G . PASS END=203384919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:52:43:0,52,1445:0,52,255:34,0 chr2 203384920 . A . PASS END=203384924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:41:0,87,1305:0,90,255:35,0 chr2 203384926 . T . PASS END=203384926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:41:0,87,1305:0,123,255:29,0 chr2 203384929 . G . PASS END=203384929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:72:41:0,72,1080:0,123,255:24,0 chr2 203395512 . A . PASS END=203395512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 203395514 . C . PASS END=203395679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:39:0,87,1343:0,87,255:40,0 chr2 203397305 . C . PASS END=203397306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,120,1800:0,123,255:40,0 chr2 203397308 . G . PASS END=203397456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:90:40:0,90,1350:0,100,255:40,0 chr2 203397458 . A . PASS END=203397459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:38:0,90,1350:0,114,255:30,0 chr2 203407024 . A . PASS END=203407026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,834:0,72,255:25,0 chr2 203407032 . A . PASS END=203407032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 203407034 . G . PASS END=203407171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:30:0,81,1264:0,81,255:40,0 chr2 203407173 . A . PASS END=203407173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:93:38:0,93,1395:0,97,255:30,0 chr2 203417437 . A . PASS END=203417437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 203417439 . G . PASS END=203417439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 203417440 . C . PASS END=203417443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 203417444 . G . PASS END=203417444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 203417445 . A . PASS END=203417466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,642:0,63,255:22,0 chr2 203417467 . A . PASS END=203417467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:20,0 chr2 203417468 . A . PASS END=203417468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 203417469 . G . PASS END=203417469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 203417470 . A . PASS END=203417473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 203417474 . T . PASS END=203417474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 203417475 . T . PASS END=203417482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:26,0 chr2 203417483 . G . PASS END=203417578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:28:0,83,1078:0,83,255:35,0 chr2 203417579 . C . PASS END=203417580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 203417581 . A . PASS END=203417585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:28,0 chr2 203417586 . A . PASS END=203417589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,80,255:24,0 chr2 203417590 . C . PASS END=203417590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 203417591 . T . PASS END=203417607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:25,0 chr2 203417608 . A . PASS END=203417611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 203419960 . T . PASS END=203419960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1194:0,96,255:32,0 chr2 203419975 . C . PASS END=203420854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:35:0,90,1343:0,90,255:40,0 chr2 203420855 . A . PASS END=203420855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr2 203420856 . C . PASS END=203421161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:36:0,85,1183:0,85,255:40,0 chr2 203421162 . C . PASS END=203421198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,105,1496:0,107,255:39,0 chr2 203421199 . G A, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.390;ReadPosRankSum=4.171;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,21,0:0.525,0.000:40:11,13,0:8,8,0:47:85,0,47,185,185,185:255,0,255:18,0:5.0000e+01,8.8531e-05,4.9835e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:8,11,5,16:12,7,9,12 chr2 203421200 . C . PASS END=203421236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1271:0,84,255:37,0 chr2 203421237 . A . PASS END=203421239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:32,0 chr2 203421240 . G . PASS END=203421250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:32:0,63,945:0,86,255:26,0 chr2 203421251 . C . PASS END=203421254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:26:0,48,720:0,78,255:17,0 chr2 203424419 . T . PASS END=203424424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,63,255:26,0 chr2 203424425 . A . PASS END=203424669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:28:0,81,973:0,84,255:40,0 chr2 203424738 . T . LowGQ END=203424738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:0:42:0,0,1258:29,0,255:33,5 chr2 203424746 . A . PASS END=203424746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 203424790 . C . PASS END=203424790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,139,255:40,0 chr2 203424910 . C . PASS END=203424910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 203425114 . T . PASS END=203425114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 203425122 . C . PASS END=203425123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:71:0,120,1800:0,197,255:40,0 chr2 203425157 . C . PASS END=203425157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 203425160 . T . PASS END=203425160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:68:0,120,1800:0,187,255:40,0 chr2 203425276 . C . PASS END=203425276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1388:0,98,255:36,0 chr2 203425355 . C . PASS END=203425355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 203425369 . T . PASS END=203425369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:96:40:0,96,1440:0,104,255:31,0 chr2 203425403 . G . PASS END=203425403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 203425484 . C . PASS END=203425484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 203425565 . T . PASS END=203425565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 203425621 . T . PASS END=203425621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 203425936 . C . PASS END=203425936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 203426070 . C . PASS END=203426070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 203426143 . T . PASS END=203426143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,102,1636:0,102,255:34,0 chr2 203426168 . C . PASS END=203426168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,111,1665:0,113,255:36,0 chr2 203426331 . T . PASS END=203426331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr2 203426704 . C . PASS END=203426704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 203426813 . G . PASS END=203426813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 203426984 . G . PASS END=203426984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 203427019 . A . PASS END=203427019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 203427160 . T . PASS END=203427160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 203427188 . A . PASS END=203427188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 203427502 . G . PASS END=203427502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 203427523 . T . PASS END=203427523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:57:0,120,1800:0,155,255:39,0 chr2 203427559 . C CA, 50.00 PASS DP=54;MQ=249.35;MQRankSum=5.756;ReadPosRankSum=1.272;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,26,0:0.491,0.000:53:12,9,0:15,17,0:48:62,0,50,194,175,372:255,0,255:25,39:5.0000e+01,6.5233e-05,5.3000e+01,2.1655e+02,2.0957e+02,3.9746e+02:0.00,12.00,15.00,34.77,46.77,37.77:14,13,11,15:13,14,14,12 chr2 203427632 . T . PASS END=203427632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 203427663 . A . PASS END=203427663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 203427686 . C . PASS END=203427686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 203428157 . C . LowGQ END=203428157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:0:29:0,0,770:68,0,255:24,7 chr2 203428223 . C . PASS END=203428223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 203428315 . A . PASS END=203428315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,163,255:40,0 chr2 203428463 . T . PASS END=203428463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 203428700 . A . PASS END=203428700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 203428874 . G . PASS END=203428874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 203429033 . C . PASS END=203429033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1582:0,113,255:40,0 chr2 203429375 . T . PASS END=203429375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr2 203429771 . C . PASS END=203429771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:61:59:0,61,2002:0,61,255:40,4 chr2 203429821 . A . PASS END=203429821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 203429823 . C . PASS END=203429823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 203429867 . A . PASS END=203429867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:82:0,120,1800:0,246,255:40,0 chr2 203429915 . C . PASS END=203429915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 203429921 . A . PASS END=203429921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 203430077 . G . PASS END=203430077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 203430191 . C . PASS END=203430191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 203430204 . G . PASS END=203430204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,191,255:40,0 chr2 203430293 . A . PASS END=203430293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 203430450 . A . PASS END=203430450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 203430477 . C . PASS END=203430477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 203430583 . A . PASS END=203430583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 203430615 . C . PASS END=203430615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,199,255:40,0 chr2 203430659 . A . PASS END=203430659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 203430811 . T . PASS END=203430811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 203431031 . G . PASS END=203431031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 203431174 . C . PASS END=203431174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 203431245 . T . PASS END=203431245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 203431352 . G . PASS END=203431352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 203431400 . G . PASS END=203431400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 203431489 . T . PASS END=203431489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 203431749 . G . PASS END=203431749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 203431766 . A . PASS END=203431766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 203431829 . T . PASS END=203431829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 203431942 . G . PASS END=203431942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1296:0,94,255:32,0 chr2 203432088 . G . PASS END=203432088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 203432132 . T . PASS END=203432132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 203432174 . T . PASS END=203432174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,166,255:40,0 chr2 203432419 . G . PASS END=203432419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:92:0,120,1800:0,255,255:40,0 chr2 203499911 . A . PASS END=203499911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 203499912 . T . PASS END=203499942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,255:0,21,255:9,0 chr2 203499943 . C . PASS END=203499951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 203499952 . C . PASS END=203499953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 203499954 . G . PASS END=203499955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 203499956 . T . PASS END=203499960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,28,255:10,0 chr2 203499961 . T . PASS END=203499971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,421:0,36,255:12,0 chr2 203499972 . C . PASS END=203499972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr2 203499973 . G . PASS END=203499977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 203499978 . C . PASS END=203499978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 203499979 . C . PASS END=203499979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 203499980 . A . PASS END=203499980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 203499981 . C . PASS END=203499981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,427:0,36,255:12,0 chr2 203499982 . G . PASS END=203499982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 203499983 . G . PASS END=203499986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr2 203499987 . G . PASS END=203499987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr2 203499988 . G . PASS END=203499990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 203499991 . A . PASS END=203499991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 203499992 . C . PASS END=203499999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 203500000 . C . PASS END=203500000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 203500001 . C . PASS END=203500007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 203500008 . A . PASS END=203500008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 203500009 . G . PASS END=203500012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 203500013 . A . PASS END=203500013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 203500014 . T . PASS END=203500015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:12,0 chr2 203500016 . A . LowGQ END=203500016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,332:19,0,255:10,0 chr2 203500017 . G . PASS END=203500018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,457:0,36,255:12,0 chr2 203500019 . G . PASS END=203500020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 203500021 . G . PASS END=203500056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,413:0,36,255:13,0 chr2 203500057 . G . PASS END=203500057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 203500058 . C . PASS END=203500058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 203500059 . A . PASS END=203500066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:13:0,22,360:0,22,255:10,0 chr2 203500067 . A . PASS END=203500067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:7,0 chr2 203500068 . G . PASS END=203500082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,280:0,24,255:8,0 chr2 203500083 . G . PASS END=203500083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 203500084 . C . PASS END=203500095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 203500096 . C . PASS END=203500096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:7,0 chr2 203500097 . G . PASS END=203500098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 203500099 . C . PASS END=203500106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:6,0 chr2 203500107 . A . PASS END=203500107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,202:0,7,202:4,0 chr2 203500108 . C . PASS END=203500124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,210:6,0 chr2 203500125 . G . PASS END=203500154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,94:3,0 chr2 203500155 . G . LowDepth;LowGQ END=203500255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:2,0 chr2 203500256 . T . LowGQ END=203500319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,0:3,0 chr2 203500320 . C . PASS END=203500337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:4,0 chr2 203500338 . C . PASS END=203500347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,133:0,12,133:5,0 chr2 203500348 . G . PASS END=203500374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,219:0,21,219:7,0 chr2 203500375 . G A, 0.09 DRAGENSnpHardQUAL DP=7;MQ=250.00;MQRankSum=0.742;ReadPosRankSum=0.742;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:6,1,0:0.143,0.000:7:3,1,0:3,0,0:17:18,0,50,36,185,220:18,0,189:6,0:9.4597e-02,1.6667e+01,6.9667e+01,5.2463e+01,2.3604e+02,2.4006e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,2,1,0:5,1,1,0 chr2 203500376 . T . PASS END=203500377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 203500378 . G . PASS END=203500378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 203500379 . C . PASS END=203500391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 203500392 . G . PASS END=203500392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:8,0 chr2 203500393 . G . PASS END=203500405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr2 203500406 . A . PASS END=203500406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 203500407 . G . PASS END=203500411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 203500412 . G . PASS END=203500412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 203500413 . C . PASS END=203500448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 203500449 . C . PASS END=203500449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 203500450 . T . PASS END=203500454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 203500455 . A . PASS END=203500455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 203500456 . G . PASS END=203500458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 203500459 . G . PASS END=203500459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 203500460 . A . PASS END=203500466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 203500467 . G . PASS END=203500467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 203500468 . C . PASS END=203500494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,407:0,36,255:13,0 chr2 203500495 . C . LowGQ END=203500495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr2 203500496 . C . PASS END=203500499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,441:0,36,255:12,0 chr2 203500500 . T . PASS END=203500500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,297:0,19,255:11,0 chr2 203500501 . T . PASS END=203500511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 203560604 . G . PASS END=203560606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 203560607 . A . PASS END=203560607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 203560608 . C . PASS END=203560616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1003:0,84,255:30,0 chr2 203560617 . A . PASS END=203560617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 203560618 . C . PASS END=203560618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 203560619 . A . PASS END=203560619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:29,0 chr2 203560620 . G . PASS END=203560621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 203560622 . C . PASS END=203560622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 203560623 . T . PASS END=203560740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:31:0,86,1218:0,86,255:40,0 chr2 203560741 . G . PASS END=203560755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:60:26:0,60,900:0,78,255:26,0 chr2 203589640 . A . PASS END=203589732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:30:0,80,1177:0,80,255:40,0 chr2 203590973 . A . PASS END=203591086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:36:0,84,1260:0,91,255:40,0 chr2 203620261 . G . PASS END=203620266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:24,0 chr2 203620267 . G . PASS END=203620398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1249:0,96,255:40,0 chr2 203620399 . C . PASS END=203620404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 203621936 . C . PASS END=203621942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:24,0 chr2 203621943 . A . PASS END=203621943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:23,0 chr2 203621944 . T . PASS END=203621957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 203621958 . A . PASS END=203621967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 203621968 . A . PASS END=203621968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,2 chr2 203621969 . C . PASS END=203621969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1149:0,33,255:31,2 chr2 203621970 . C . PASS END=203621970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr2 203621971 . C . PASS END=203622020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:33:0,84,1235:0,99,255:36,0 chr2 203622021 . C . PASS END=203622021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 203622022 . T . PASS END=203622125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1327:0,104,255:40,0 chr2 203622126 . C . PASS END=203622126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:29,0 chr2 203622127 . A . PASS END=203622136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:31,0 chr2 203622137 . C . PASS END=203622138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 203622139 . G . PASS END=203622141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 203622142 . T . PASS END=203622147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 203622148 . T . PASS END=203622154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 203622155 . G . PASS END=203622161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr2 203623956 . A . PASS END=203624076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,99,1485:0,127,255:40,0 chr2 203630169 . G . PASS END=203630182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,917:0,78,255:26,0 chr2 203630183 . A . PASS END=203630183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 203630184 . T . PASS END=203630184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 203630185 . G . PASS END=203630185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 203630186 . A . PASS END=203630186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 203630187 . A . PASS END=203630187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:26,0 chr2 203630188 . A . PASS END=203630188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:28,0 chr2 203630189 . T . PASS END=203630189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 203630190 . C . PASS END=203630265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:28:0,84,1033:0,84,255:36,0 chr2 203630266 . A . PASS END=203630266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:31,0 chr2 203630267 . T . PASS END=203630296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1239:0,86,255:34,0 chr2 203630297 . T . PASS END=203630297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 203630298 . T . PASS END=203630304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 203630305 . A . PASS END=203630305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 203630306 . A . PASS END=203630307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 203630308 . G . PASS END=203630320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 203630321 . G . PASS END=203630326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 203630327 . C . PASS END=203630328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 203630329 . G . PASS END=203630329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 203630330 . T . PASS END=203630332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 203630333 . C . PASS END=203630335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 203630336 . C . PASS END=203630381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,65,255:26,0 chr2 203630382 . G . PASS END=203630382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 203630383 . T . PASS END=203630383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 203630384 . C . PASS END=203630398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1155:0,90,255:31,0 chr2 203630399 . A . PASS END=203630399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 203630400 . A . PASS END=203630409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1119:0,80,255:32,0 chr2 203630410 . T . PASS END=203630410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:29,0 chr2 203630411 . C . PASS END=203630487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1177:0,80,255:37,0 chr2 203644256 . T . PASS END=203644371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,103,1714:0,103,255:40,0 chr2 203650641 . A . PASS END=203650642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:42:27:0,42,842:0,42,255:25,0 chr2 203650643 . C . PASS END=203650645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 203650646 . G . PASS END=203650730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:28:0,83,1017:0,83,255:40,0 chr2 203651422 . C . PASS END=203651432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,174,255:40,0 chr2 203651433 . T . PASS END=203651460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:59:0,87,1305:0,144,255:40,0 chr2 203651461 . G . PASS END=203651467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:72:62:0,72,1080:0,147,255:26,0 chr2 203651468 . A . PASS END=203651471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:63:0,81,1215:0,172,255:27,0 chr2 203651472 . A . PASS END=203651474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:78:60:0,78,1170:0,180,255:26,0 chr2 203651475 . AT A,ATT,ATTT, 50.00 PASS DP=60;MQ=249.88;MQRankSum=6.178;ReadPosRankSum=1.185;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:25,5,29,1,0:0.083,0.483,0.017,0.000:60:10,2,13,0,0:15,3,16,1,0:48:60,182,179,0,119,50,158,359,201,208,137,307,125,316,258:255,0,255:24,54:5.0000e+01,1.8218e+02,1.8235e+02,6.5233e-05,1.2935e+02,5.3000e+01,1.5764e+02,3.6904e+02,2.1061e+02,2.1064e+02,1.6165e+02,3.4142e+02,1.5937e+02,3.5082e+02,2.8615e+02:0.00,10.00,13.00,10.00,20.00,13.00,10.00,20.00,20.00,13.00,34.77,44.77,44.77,44.77,37.77:14,11,15,20:15,10,17,18 chr2 203651476 . T . LowGQ END=203651477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:28,35:63:0:60:0,0,0:13,0,255:40,8 chr2 203651478 . T . PASS END=203651498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,105,1800:0,105,255:40,0 chr2 203653553 . T . PASS END=203653554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:25,0 chr2 203653555 . T . PASS END=203653556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 203653557 . G . PASS END=203653570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr2 203653571 . C . PASS END=203653576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 203653577 . A . PASS END=203653577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 203653578 . G . PASS END=203653580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 203653581 . A . PASS END=203653582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 203653583 . G . PASS END=203653588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:28,0 chr2 203653589 . A . PASS END=203653589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,923:0,67,255:27,0 chr2 203653590 . G . PASS END=203653590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 203653591 . A . PASS END=203653591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 203653592 . G . PASS END=203653600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1087:0,93,255:31,0 chr2 203653601 . G . PASS END=203653601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 203653602 . A . PASS END=203653624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1089:0,82,255:35,0 chr2 203653625 . G . PASS END=203653625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1035:0,55,255:30,0 chr2 203653626 . G . PASS END=203653807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1260:0,92,255:40,0 chr2 203653808 . C . PASS END=203653810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:26,0 chr2 203661613 . C . PASS END=203661687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:81:0,120,1800:0,230,255:40,0 chr2 203676469 . C . PASS END=203676512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:89:0,120,1800:0,184,255:40,0 chr2 203679425 . T . PASS END=203679507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:82:0,120,1800:0,244,255:40,0 chr2 203680634 . C . PASS END=203680732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:81:45:0,81,1578:0,81,255:40,0 chr2 203682141 . C . PASS END=203682266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:46:0,120,1800:0,122,255:40,0 chr2 203684418 . T . PASS END=203684422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 203684423 . C . PASS END=203684423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 203684424 . T . PASS END=203684451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:26,0 chr2 203684452 . G . PASS END=203684622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:29:0,81,1215:0,87,255:40,0 chr2 203686081 . C . PASS END=203686204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:45:0,93,1395:0,122,255:40,0 chr2 203690418 . C . PASS END=203690424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,168,255:40,0 chr2 203690425 . T . PASS END=203690490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:67:0,120,1800:0,155,255:40,0 chr2 203693571 . C . PASS END=203693596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,144,255:40,0 chr2 203693597 . C . PASS END=203693732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:90:37:0,90,1350:0,111,255:40,1 chr2 203745583 . T . PASS END=203745660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:96:44:0,96,1440:0,116,255:40,0 chr2 203747434 . C . PASS END=203747506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:96:45:0,96,1568:0,96,255:40,0 chr2 203748332 . C . PASS END=203748464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:88:31:0,88,1140:0,88,255:40,0 chr2 203748921 . C . PASS END=203749026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:44:0,120,1800:0,122,255:40,0 chr2 203749118 . C . PASS END=203749246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:37:0,90,1350:0,90,255:40,0 chr2 203749247 . C . PASS END=203749258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:23:0,63,945:0,69,255:23,0 chr2 203757340 . C . PASS END=203757425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,2:93:99:81:0,120,1800:0,223,255:40,0 chr2 203759304 . C . PASS END=203759349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:90:0,120,1800:0,250,255:40,0 chr2 203760788 . T . PASS END=203760792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 203760793 . T . PASS END=203760794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 203760795 . C . PASS END=203760800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:31,0 chr2 203760801 . C . PASS END=203760801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 203760802 . C . PASS END=203760802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 203760803 . A . PASS END=203760803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 203760804 . T . PASS END=203760937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:31:0,80,1133:0,80,255:40,0 chr2 203760938 . A . PASS END=203760938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:56:41:0,56,1063:0,56,255:29,0 chr2 203760939 . C . PASS END=203760942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:34:0,93,1395:0,102,255:32,0 chr2 203762023 . C . PASS END=203762128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:42:0,81,1215:0,120,255:40,0 chr2 203762129 . A . PASS END=203762132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:39:0,75,1125:0,117,255:25,0 chr2 203762133 . A . PASS END=203762135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:57:38:0,57,855:0,114,255:19,0 chr2 203762136 . A . PASS END=203762138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:35:0,63,945:0,105,255:21,0 chr2 203764254 . C . PASS END=203764334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1169:0,80,255:40,0 chr2 203764335 . A . PASS END=203764336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 203764337 . G . PASS END=203764337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 203764338 . T . PASS END=203764360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,900:0,61,255:26,0 chr2 203765748 . T . PASS END=203765842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,109,1770:0,109,255:40,0 chr2 203772588 . C . PASS END=203772682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:64:0,120,1800:0,175,255:40,0 chr2 203776159 . T . PASS END=203776199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,102,1337:0,104,255:40,0 chr2 203782725 . A . PASS END=203782766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:72:0,120,1800:0,179,255:40,0 chr2 203806626 . A . PASS END=203806703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:51:0,120,1800:0,152,255:40,0 chr2 203807463 . C . PASS END=203807470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr2 203807471 . C . PASS END=203807479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1062:0,83,255:34,0 chr2 203807480 . C . PASS END=203807481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1235:0,66,255:34,0 chr2 203807482 . C . PASS END=203807690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:35:0,89,1255:0,89,255:40,0 chr2 203817282 . A . PASS END=203817302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:36:0,103,1406:0,103,255:40,0 chr2 203817303 . G . PASS END=203817402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:37:0,87,1305:0,111,255:40,0 chr2 203818728 . A . PASS END=203818857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:45:0,114,1710:0,128,255:40,0 chr2 203820397 . A . PASS END=203820400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1040:0,87,255:30,0 chr2 203820401 . C . PASS END=203820401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 203820402 . T . PASS END=203820481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:30:0,87,1305:0,90,255:40,0 chr2 203825960 . A . PASS END=203825962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 203825963 . A . PASS END=203825963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 203825964 . T . PASS END=203825964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 203825965 . T . PASS END=203825965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:28,0 chr2 203825966 . G . PASS END=203825969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:32,0 chr2 203825970 . A . PASS END=203825970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:31,0 chr2 203825971 . T . PASS END=203826247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:32:0,96,1158:0,96,255:40,0 chr2 203831701 . G . PASS END=203831701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 203831702 . G . PASS END=203831821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:94:34:0,94,1296:0,94,255:40,0 chr2 203834642 . G . PASS END=203834785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,105,1575:0,137,255:40,0 chr2 203835612 . A . PASS END=203835613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1230:0,94,255:36,0 chr2 203835614 . A . PASS END=203835614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:49:37:0,49,1152:0,49,255:35,0 chr2 203835615 . T . PASS END=203835630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1244:0,81,255:37,0 chr2 203835631 . G . PASS END=203835633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,100,1360:0,100,255:37,0 chr2 203835634 . A . PASS END=203835634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1328:0,78,255:36,0 chr2 203835635 . A . PASS END=203835715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:36:0,86,1241:0,86,255:40,0 chr2 203835716 . A . PASS END=203835716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:30,0 chr2 203835717 . T . PASS END=203835732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:31,0 chr2 203836228 . G . PASS END=203836229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 203836230 . G . PASS END=203836458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:84:30:0,84,1117:0,89,255:40,0 chr2 203836459 . A . PASS END=203836461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:26,0 chr2 203838205 . C . PASS END=203838223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:72:0,120,1800:0,186,255:40,0 chr2 203839057 . A . PASS END=203839219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:40:0,102,1474:0,102,255:40,0 chr2 203841992 . C . PASS END=203842055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,1:96:99:72:0,120,1800:0,170,255:40,1 chr2 203846278 . G . PASS END=203846408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:91:47:0,91,1395:0,91,255:40,0 chr2 203846795 . G . PASS END=203846806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,879:0,61,255:26,0 chr2 203846807 . C . PASS END=203846956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:28:0,84,1019:0,84,255:40,0 chr2 203846957 . A . PASS END=203846957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,7:64:61:64:0,61,1749:0,61,255:40,0 chr2 203846958 . G . PASS END=203847155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:87:37:0,87,1305:0,107,255:40,0 chr2 203847156 . C . PASS END=203847164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:31:0,69,1035:0,93,255:24,0 chr2 203848229 . T . PASS END=203848347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:68:0,120,1800:0,174,255:40,2 chr2 203881108 . A . PASS END=203881158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:69:0,120,1800:0,197,255:40,0 chr2 203906488 . A . PASS END=203906579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,112,1800:0,112,255:40,0 chr2 203914537 . G . PASS END=203914698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:32:0,96,1233:0,96,255:40,0 chr2 203921150 . A . PASS END=203921231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,152,255:40,0 chr2 203922049 . T . PASS END=203922056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,103,1714:0,103,255:40,0 chr2 203922057 . C . PASS END=203922057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,5:51:25:51:0,25,1402:0,25,255:40,4 chr2 203922058 . A . PASS END=203922058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,4:51:6:51:0,6,1584:0,6,255:40,2 chr2 203922059 . A . PASS END=203922059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1738:0,79,255:40,0 chr2 203922060 . A . PASS END=203922176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:52:0,93,1763:0,93,255:40,0 chr2 203933116 . A . PASS END=203933198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:64:0,120,1800:0,185,255:40,0 chr2 203942475 . A . PASS END=203942560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:49:0,112,1800:0,112,255:40,0 chr2 203947942 . A . PASS END=203948248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:98:36:0,98,1202:0,98,255:40,0 chr2 203949186 . A . PASS END=203949292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:39:0,104,1419:0,104,255:40,0 chr2 203962270 . C . PASS END=203962356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:63:0,120,1800:0,190,255:40,0 chr2 203964352 . G . PASS END=203964406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:55:0,120,1800:0,139,255:40,0 chr2 203964407 . C . PASS END=203964435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:99:57:0,116,1800:0,116,255:40,0 chr2 203972143 . G . PASS END=203972241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:57:0,120,1800:0,135,255:40,0 chr2 203972331 . G . PASS END=203972897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:80:31:0,80,1117:0,80,255:40,0 chr2 203972898 . A . PASS END=203972898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:28,0 chr2 203972899 . A . PASS END=203972903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 203972904 . T . PASS END=203972911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1080:0,74,255:26,0 chr2 203974873 . T . PASS END=203974880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1119:0,93,255:31,0 chr2 203974881 . C . PASS END=203974882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:30:0,54,1000:0,54,255:30,0 chr2 203974883 . G . PASS END=203974886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1127:0,80,255:33,0 chr2 203974887 . G . PASS END=203974887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1170:0,69,255:32,0 chr2 203974888 . T . PASS END=203974916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:86:33:0,86,1227:0,86,255:40,0 chr2 203974917 . A . PASS END=203974917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1686:0,78,255:40,0 chr2 203974918 . T . PASS END=203975005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:32:0,87,1225:0,95,255:40,0 chr2 203976702 . C . PASS END=203976820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,102,1469:0,102,255:40,0 chr2 203976821 . A . PASS END=203976821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1368:0,79,255:32,0 chr2 203977738 . C . PASS END=203977739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 203977740 . C . PASS END=203977741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr2 203977742 . T . PASS END=203978026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:29:0,84,1088:0,87,255:40,0 chr2 203978027 . C . PASS END=203978027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1166:0,66,255:28,0 chr2 203978028 . A . PASS END=203978038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1133:0,80,255:29,0 chr2 203978039 . C . PASS END=203978041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 203980708 . G . PASS END=203980793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:63:0,120,1800:0,167,255:40,0 chr2 203986977 . G . PASS END=203987066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,1:105:99:81:0,120,1800:0,227,255:40,0 chr2 203990075 . G . PASS END=203990234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:84:41:0,84,1377:0,84,255:40,0 chr2 203990235 . A . PASS END=203990237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:78:41:0,78,1170:0,106,255:26,0 chr2 203990238 . C . PASS END=203990238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1215:0,117,255:27,0 chr2 203990239 . C . PASS END=203990243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:38:0,72,1080:0,114,255:26,0 chr2 203990683 . A . PASS END=203990816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:41:0,108,1620:0,109,255:40,0 chr2 203991280 . G . PASS END=203991439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:34:0,87,1288:0,87,255:40,0 chr2 203991547 . G . PASS END=203991649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:61:0,120,1800:0,173,255:40,0 chr2 203992504 . G . PASS END=203992660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:47:0,108,1485:0,108,255:40,0 chr2 203995041 . C . PASS END=203995151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:31:0,86,1089:0,86,255:40,2 chr2 203995152 . C . PASS END=203995152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:33,0 chr2 203995153 . T . PASS END=203995196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,979:0,84,255:35,0 chr2 203995197 . A . PASS END=203995199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 203996696 . A . PASS END=203996832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,1:83:99:52:0,120,1800:0,123,255:40,0 chr2 203996833 . C . PASS END=203996855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:58:0,120,1800:0,141,255:40,0 chr2 203997781 . A . PASS END=203997869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,126,255:40,0 chr2 204000400 . G . PASS END=204000401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 204000402 . T . PASS END=204000402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:28,0 chr2 204000403 . T . PASS END=204000407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 204000408 . A . PASS END=204000408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 204000409 . A . PASS END=204000945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:86:30:0,86,1117:0,86,255:40,0 chr2 204000946 . G . PASS END=204000946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1512:0,77,255:38,0 chr2 204000947 . A . PASS END=204000975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1258:0,91,255:37,0 chr2 204001322 . A . PASS END=204001497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:42:0,109,1391:0,109,255:40,0 chr2 204002885 . T . PASS END=204003038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:34:0,84,1215:0,86,255:40,0 chr2 204003343 . C . PASS END=204003471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:40:0,104,1359:0,104,255:40,0 chr2 204009323 . G . PASS END=204009345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,878:0,69,255:26,0 chr2 204009346 . G . PASS END=204009628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:90:30:0,90,1050:0,90,255:40,0 chr2 204009734 . A . PASS END=204009883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:53:0,120,1800:0,124,255:40,0 chr2 204013714 . G . PASS END=204013857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:38:0,102,1488:0,104,255:40,0 chr2 204013858 . C . PASS END=204013858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr2 204013859 . C . PASS END=204013871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,102,255:33,0 chr2 204016188 . G . PASS END=204016312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:44:0,120,1800:0,120,255:40,0 chr2 204022422 . G . PASS END=204022548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:83:31:0,83,1132:0,83,255:40,0 chr2 204030872 . T . PASS END=204031020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:92:39:0,92,1509:0,92,255:40,0 chr2 204031950 . G . PASS END=204032083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:93:44:0,93,1501:0,93,255:40,0 chr2 204034470 . G . PASS END=204034574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:61:0,120,1800:0,152,255:40,0 chr2 204036651 . A . PASS END=204036746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:42:0,108,1620:0,126,255:40,0 chr2 204037452 . T . PASS END=204037576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:50:0,106,1765:0,106,255:40,0 chr2 204039870 . A . PASS END=204040010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:45:0,111,1665:0,111,255:40,0 chr2 204045105 . G . PASS END=204045235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:93:34:0,93,1384:0,102,255:40,0 chr2 204048002 . A . PASS END=204048111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,120,1800:0,121,255:40,0 chr2 204053195 . G . PASS END=204053195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1111:0,93,255:31,0 chr2 204053196 . A . PASS END=204053312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:33:0,89,1249:0,89,255:40,0 chr2 204055015 . G . PASS END=204055112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,120,1800:0,150,255:40,1 chr2 204058518 . G . PASS END=204058634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:85:33:0,85,1188:0,85,255:40,0 chr2 204062025 . G . PASS END=204062060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:39:0,92,1482:0,92,255:40,0 chr2 204062061 . A G, 217.62 PASS DP=57;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,57,0:1.000,0.000:57:0,32,0:0,25,0:168:255,171,0,2120,171,2120:255,174,0:0,0:2.1762e+02,1.6762e+02,0.0000e+00,4.5000e+02,2.0239e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,38,19:0,0,29,28 chr2 204062062 . T . PASS END=204062098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:57:0,120,1800:0,136,255:40,0 chr2 204062099 . C . PASS END=204062114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,120,1722:0,120,255:40,0 chr2 204064061 . A . PASS END=204064170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:90:41:0,90,1441:0,90,255:40,0 chr2 204066266 . A . PASS END=204066438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:43:0,96,1440:0,118,255:40,0 chr2 204067410 . A . PASS END=204067504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,120,1800:0,128,255:40,0 chr2 204073358 . A . PASS END=204073358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 204073359 . G . PASS END=204073368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,889:0,72,255:26,0 chr2 204073369 . C . PASS END=204073378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1125:0,93,255:32,0 chr2 204073379 . T . PASS END=204073379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1108:0,49,255:29,0 chr2 204073380 . A . PASS END=204073404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1155:0,80,255:32,0 chr2 204073405 . T . PASS END=204073405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 204073406 . A . PASS END=204073442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1194:0,96,255:35,0 chr2 204073443 . C . PASS END=204073461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:23:0,60,900:0,69,255:25,0 chr2 204073462 . G . PASS END=204073472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 204073473 . A . PASS END=204073476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 204073884 . G . PASS END=204074045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:51:0,102,1530:0,123,255:40,0 chr2 204075681 . G . PASS END=204075807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,108,1620:0,132,255:40,0 chr2 204075808 . T . PASS END=204075830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:26:0,60,900:0,68,255:26,0 chr2 204078241 . C . PASS END=204078243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 204078244 . G . PASS END=204078246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1009:0,84,255:28,0 chr2 204078247 . T . PASS END=204078247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,799:0,15,255:26,0 chr2 204078248 . C . PASS END=204078251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1008:0,48,255:28,0 chr2 204078252 . G . PASS END=204078517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:83:32:0,83,1111:0,83,255:40,0 chr2 204081976 . A . PASS END=204082077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,104,1443:0,104,255:40,0 chr2 204090846 . A . PASS END=204090849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1256:0,105,255:35,0 chr2 204090850 . A . PASS END=204090873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1278:0,89,255:35,0 chr2 204103786 . A . PASS END=204103786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr2 204103787 . T . PASS END=204103804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,648:0,60,255:21,0 chr2 204103805 . T . PASS END=204103806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 204103807 . G . PASS END=204103807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204103808 . C . PASS END=204103808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 204103809 . C . PASS END=204103813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204103814 . C . PASS END=204103815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 204103816 . T . PASS END=204103817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 204103818 . C . PASS END=204103818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:20,0 chr2 204103819 . T . PASS END=204103821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204103822 . C . PASS END=204103824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 204103825 . G . PASS END=204103839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,900:0,69,255:24,0 chr2 204103840 . G . PASS END=204103840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 204103841 . T . PASS END=204103841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 204103842 . G . PASS END=204103843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:20,0 chr2 204103844 . T . PASS END=204103845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 204103846 . T . PASS END=204103857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,743:0,47,255:19,0 chr2 204104932 . A . PASS END=204104949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,189,255:40,0 chr2 204110569 . G . PASS END=204110618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:67:0,116,1800:0,116,255:40,0 chr2 204111478 . A . PASS END=204111479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1003:0,84,255:30,0 chr2 204111480 . A . PASS END=204111480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,960:0,76,255:30,0 chr2 204111481 . T . PASS END=204111484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1178:0,83,255:33,0 chr2 204111485 . A . PASS END=204111485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:31,0 chr2 204111486 . A . PASS END=204111619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:32:0,84,1183:0,87,255:40,0 chr2 204111620 . C . PASS END=204111620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 204111621 . A . PASS END=204111621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 204111622 . G . PASS END=204111635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:26:0,63,945:0,78,255:25,0 chr2 204111636 . A . PASS END=204111644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:22:0,54,810:0,66,255:18,0 chr2 204116690 . C T, 157.90 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,16,0:0,21,0:108:196,111,0,1405,111,1405:255,111,0:0,0:1.5790e+02,1.0790e+02,0.0000e+00,4.5000e+02,1.4267e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,9:0,0,17,20 chr2 204116691 . G . PASS END=204116727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:37:0,95,1341:0,95,255:40,0 chr2 204116728 . T . PASS END=204116832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:50:0,111,1665:0,112,255:40,0 chr2 204131237 . C . PASS END=204131246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr2 204131247 . A . PASS END=204131247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 204131248 . A . PASS END=204131248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 204131249 . T . PASS END=204131250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,887:0,81,255:27,0 chr2 204131251 . A . PASS END=204131251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 204131252 . T . PASS END=204131261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 204131262 . G . PASS END=204131262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 204131263 . G . PASS END=204131264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 204131265 . T . PASS END=204131265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,818:0,64,255:26,0 chr2 204131266 . C . PASS END=204131338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1186:0,90,255:35,0 chr2 204131339 . A . PASS END=204131357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:25:0,63,945:0,75,255:26,0 chr2 204131358 . T . PASS END=204131358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:21,0 chr2 204131359 . T . PASS END=204131364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 204131365 . T . PASS END=204131365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 204131366 . G . PASS END=204131384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:21,0 chr2 204131385 . T . PASS END=204131385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 204131386 . C . PASS END=204131395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 204131396 . C . PASS END=204131404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:19,0 chr2 204137369 . T . PASS END=204137471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:71:0,120,1800:0,132,255:40,1 chr2 204143296 . C . PASS END=204143405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:92:34:0,92,1308:0,92,255:40,0 chr2 204143406 . C . PASS END=204143406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:31,0 chr2 204143407 . A . PASS END=204143411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:32,0 chr2 204144782 . A . PASS END=204144836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:82:0,120,1800:0,242,255:40,0 chr2 204150335 . T . PASS END=204150455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:65:0,120,1800:0,173,255:40,2 chr2 204154488 . A . PASS END=204154599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:50:0,117,1739:0,117,255:40,0 chr2 204156985 . A . PASS END=204157011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:50:0,120,1800:0,150,255:40,0 chr2 204157012 . G . PASS END=204157049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:98:52:0,98,1529:0,98,255:40,0 chr2 204161197 . G . PASS END=204161286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:96:45:0,96,1440:0,135,255:40,0 chr2 204161481 . G . PASS END=204161631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:30:0,81,1215:0,90,255:40,0 chr2 204193238 . A . PASS END=204193243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 204193244 . G . PASS END=204193268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,745:0,60,255:26,0 chr2 204193269 . A . PASS END=204193278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 204193279 . G . PASS END=204193279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr2 204193280 . G . PASS END=204193282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 204193283 . C . PASS END=204193283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 204193284 . G . PASS END=204193284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 204193285 . C . PASS END=204193310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,990:0,72,255:26,0 chr2 204193311 . A . PASS END=204193311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:21,0 chr2 204193312 . T . PASS END=204193322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,845:0,69,255:23,0 chr2 204193323 . T . PASS END=204193323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 204193324 . G . PASS END=204193339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 204193340 . A . PASS END=204193344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:16,0 chr2 204193345 . C . PASS END=204193354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:31:16:0,31,520:0,31,255:12,0 chr2 204206920 . T . PASS END=204206939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:37:0,94,1280:0,94,255:38,0 chr2 204206940 . C . PASS END=204206952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:37:0,81,1215:0,95,255:37,0 chr2 204206953 . G . PASS END=204206953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:78:37:0,78,1170:0,95,255:26,0 chr2 204211173 . A . PASS END=204211199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:60:0,120,1800:0,153,255:40,0 chr2 204219877 . G . PASS END=204219939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,104,1377:0,104,255:40,0 chr2 204231600 . T . PASS END=204231602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 204231603 . G . PASS END=204231767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:28:0,81,1164:0,83,255:40,0 chr2 204239543 . A . PASS END=204239575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,138,255:40,0 chr2 204240655 . G . PASS END=204240684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,137,255:40,0 chr2 204240739 . A . PASS END=204240855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:74:0,120,1800:0,156,255:40,0 chr2 204244931 . A . PASS END=204245107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:96:52:0,96,1440:0,107,255:40,0 chr2 204246912 . T . PASS END=204246929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:80:0,120,1800:0,191,255:40,1 chr2 204247994 . A . PASS END=204248044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:71:0,120,1800:0,193,255:40,0 chr2 204255767 . A . PASS END=204255862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,83,255:40,0 chr2 204255863 . T . PASS END=204255866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:31:0,78,1170:0,93,255:26,0 chr2 204259423 . G . PASS END=204259423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 204259424 . C . PASS END=204259430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,919:0,75,255:26,0 chr2 204259431 . C . PASS END=204259569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:27:0,81,1033:0,81,255:40,0 chr2 204259804 . T . PASS END=204259812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:93:0,120,1800:0,246,255:40,0 chr2 204260379 . C . PASS END=204260503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:86:32:0,86,1188:0,86,255:40,0 chr2 204261508 . C . PASS END=204261521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,868:0,72,255:24,0 chr2 204261522 . G . PASS END=204261522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 204261523 . C . PASS END=204261526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 204261527 . C . PASS END=204261527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,726:0,58,255:23,0 chr2 204261528 . A . PASS END=204261528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,74,255:24,0 chr2 204261529 . C . PASS END=204261529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,704:0,58,255:24,0 chr2 204261530 . T . PASS END=204261530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 204261531 . C . PASS END=204261531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr2 204261532 . C . PASS END=204261532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:25,0 chr2 204261533 . T . PASS END=204261538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1072:0,87,255:30,0 chr2 204261539 . T . PASS END=204261539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 204261540 . C . PASS END=204261544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 204261545 . T . PASS END=204261545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 204261546 . A . PASS END=204261551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 204261552 . G . PASS END=204261552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:28,0 chr2 204261553 . C . PASS END=204261595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1147:0,83,255:35,0 chr2 204261596 . C . PASS END=204261599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:26,0 chr2 204261600 . G . PASS END=204261607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:27,0 chr2 204261608 . C . PASS END=204261645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,823:0,66,255:26,0 chr2 204261646 . T . PASS END=204261673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:15:0,42,630:0,45,255:19,0 chr2 204261674 . T . PASS END=204261685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 204261686 . T . PASS END=204261690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 204267299 . G . PASS END=204267301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr2 204267302 . A . PASS END=204267304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 204267305 . C . PASS END=204267305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 204267306 . T . PASS END=204267309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 204267310 . C . PASS END=204267319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,767:0,60,255:26,0 chr2 204267320 . G . PASS END=204267330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,986:0,80,255:32,0 chr2 204267331 . C . PASS END=204267331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr2 204267332 . C . PASS END=204267332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 204267333 . T . PASS END=204267333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:31,0 chr2 204267334 . G . PASS END=204267348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:33:0,84,1271:0,84,255:37,2 chr2 204267349 . C . PASS END=204267349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:39,0 chr2 204267350 . C . PASS END=204267447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1199:0,92,255:40,0 chr2 204267448 . C . PASS END=204267457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,87,255:26,0 chr2 204268040 . A . PASS END=204268084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:43:0,114,1450:0,115,255:40,0 chr2 204272607 . C . PASS END=204272608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 204272609 . C . PASS END=204272609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 204272610 . A . PASS END=204272613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 204272614 . C . PASS END=204272616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 204272617 . A . PASS END=204272618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 204272619 . A . PASS END=204272624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,948:0,81,255:28,0 chr2 204272625 . A . PASS END=204272625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 204272626 . G . PASS END=204272662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1197:0,86,255:34,0 chr2 204272663 . T . PASS END=204272663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1087:0,72,255:32,0 chr2 204272664 . C . PASS END=204272696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1086:0,80,255:34,0 chr2 204272697 . C . PASS END=204272697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 204272698 . T . PASS END=204272700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 204272701 . A . PASS END=204272701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 204272702 . T . PASS END=204272712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 204272713 . C . PASS END=204272715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:24,0 chr2 204272716 . C . PASS END=204272725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:24:0,54,810:0,65,255:19,0 chr2 204276008 . T . PASS END=204276094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,117,1597:0,117,255:40,0 chr2 204281631 . T . PASS END=204281634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 204281635 . A . PASS END=204281637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,675:0,60,255:20,0 chr2 204281638 . T . PASS END=204281656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,684:0,57,255:19,0 chr2 204281657 . C . PASS END=204281662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 204281663 . G . PASS END=204281663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 204281664 . A . PASS END=204281691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr2 204281692 . A . PASS END=204281692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:24,2 chr2 204281693 . C . PASS END=204281695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:15:28:0,15,886:0,15,255:25,2 chr2 204281696 . C . PASS END=204281696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:26,0 chr2 204281697 . C . PASS END=204281699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 204281700 . C . PASS END=204281706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 204281707 . A . PASS END=204281707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 204281708 . G . PASS END=204281720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,958:0,81,255:28,0 chr2 204281721 . A . PASS END=204281721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 204281722 . G . PASS END=204281723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 204281724 . A . PASS END=204281758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:24:0,67,931:0,67,255:26,0 chr2 204281759 . G . PASS END=204281759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 204281760 . C . PASS END=204281765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 204281766 . A . PASS END=204281769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:23:0,54,810:0,56,255:19,0 chr2 204281770 . C . PASS END=204281773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 204281774 . C . PASS END=204281777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,60,255:14,0 chr2 204281778 . G . PASS END=204281780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:19:0,39,585:0,57,255:13,0 chr2 204281781 . C . PASS END=204281787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 204281788 . T . PASS END=204281788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 204281789 . T . PASS END=204281795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr2 204281796 . T . PASS END=204281796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,458:0,28,255:14,0 chr2 204281797 . G . PASS END=204281800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 204281801 . A . PASS END=204281801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 204281802 . A . PASS END=204281804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 204291900 . T . PASS END=204292075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:39:0,117,1375:0,117,255:40,0 chr2 204292219 . T . PASS END=204292237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,2:85:99:82:0,120,1800:0,213,255:40,0 chr2 204292238 . T . PASS END=204292298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:68:0,120,1800:0,188,255:40,0 chr2 204295724 . C . PASS END=204295728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,122,255:40,0 chr2 204304160 . C . PASS END=204304161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204304162 . A . PASS END=204304162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 204304163 . C . PASS END=204304163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204304164 . C . PASS END=204304164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 204304165 . A . PASS END=204304169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,693:0,60,255:20,0 chr2 204304170 . C . PASS END=204304170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,631:0,43,255:19,0 chr2 204304171 . T . PASS END=204304173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 204304174 . A . PASS END=204304174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 204304175 . G . PASS END=204304175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204304176 . A . PASS END=204304176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:19,0 chr2 204304177 . G . PASS END=204304186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 204304187 . C . PASS END=204304188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 204304189 . G . PASS END=204304192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 204304193 . T . PASS END=204304193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,774:0,39,255:22,0 chr2 204304194 . C . PASS END=204304195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,901:0,75,255:25,0 chr2 204304196 . T . PASS END=204304196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 204304197 . T . PASS END=204304197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 204304198 . T . PASS END=204304198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,750:0,36,255:23,0 chr2 204304199 . G . PASS END=204304209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,914:0,62,255:25,0 chr2 204304210 . G . PASS END=204304210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 204304211 . A . PASS END=204304212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 204304213 . G . PASS END=204304214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 204304215 . G . PASS END=204304215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:27,0 chr2 204304216 . G . PASS END=204304217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 204304218 . C . PASS END=204304218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 204304219 . C . PASS END=204304249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,86,255:37,0 chr2 204304250 . A . PASS END=204304250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:35,0 chr2 204304251 . C . PASS END=204304252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 204304253 . G . PASS END=204304253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:31,0 chr2 204304254 . C . PASS END=204304415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:93:36:0,93,1335:0,93,255:40,0 chr2 204304416 . A . PASS END=204304452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,120,1800:0,124,255:40,0 chr2 204304453 . A G, 47.40 PASS DP=51;MQ=250.00;MQRankSum=6.019;ReadPosRankSum=2.517;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,21,0:0.412,0.000:51:16,6,0:14,15,0:46:82,0,50,712,999,1711:255,0,255:27,0:4.7398e+01,1.0070e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,10,11:16,14,13,8 chr2 204304454 . G . PASS END=204304490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,123,255:40,0 chr2 204304491 . T . PASS END=204304612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:35:0,84,1260:0,89,255:40,0 chr2 204304613 . T . PASS END=204304622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:31:0,69,1035:0,93,255:26,0 chr2 204304623 . G . PASS END=204304627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 204304628 . T . PASS END=204304628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 204304629 . C . PASS END=204304630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 204304631 . C . PASS END=204304638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 204304639 . C . PASS END=204304643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:30,0 chr2 204304644 . G . PASS END=204304644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:26,0 chr2 204304645 . G . PASS END=204304645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 204304646 . A . PASS END=204304668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:27:0,64,872:0,64,255:26,0 chr2 204304669 . G . PASS END=204304670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 204304671 . T . PASS END=204304672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:24,0 chr2 204304673 . T . PASS END=204304673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,919:0,45,255:20,0 chr2 204304674 . G . PASS END=204304713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,65,255:26,0 chr2 204304714 . G . PASS END=204304723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:28,0 chr2 204304724 . T . PASS END=204304725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,798:0,67,255:27,0 chr2 204304726 . C . PASS END=204304733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1102:0,87,255:29,0 chr2 204304734 . G . PASS END=204304735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 204304736 . G . PASS END=204304736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 204304737 . T . PASS END=204304737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 204304738 . C . PASS END=204304747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 204304748 . C . PASS END=204304750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:31:0,78,1170:0,93,255:26,0 chr2 204304751 . A . PASS END=204304752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 204304753 . T . PASS END=204304753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 204304754 . C . PASS END=204304764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 204304765 . C . PASS END=204304765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 204304766 . T . PASS END=204304779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr2 204304780 . A . PASS END=204304805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 204304806 . T . PASS END=204304806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:20,0 chr2 204304807 . T . PASS END=204304818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr2 204304819 . G . PASS END=204304819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 204304820 . A . PASS END=204304821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 204304822 . T . PASS END=204304822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 204304823 . G . PASS END=204304845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,831:0,66,255:24,0 chr2 204304846 . C . PASS END=204304846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:21,0 chr2 204304847 . T . PASS END=204304852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:22,0 chr2 204304853 . A . PASS END=204304855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:44:25:0,44,855:0,44,255:19,0 chr2 204304856 . T . PASS END=204304856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 204304857 . G . PASS END=204304857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 204304858 . G . PASS END=204304872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 204304873 . T . PASS END=204304873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:19,0 chr2 204304874 . G . PASS END=204304875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204304876 . G . PASS END=204304915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,44,255:19,0 chr2 204304916 . A . PASS END=204304916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 204304917 . C . PASS END=204304929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 204304930 . G . PASS END=204304958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,474:0,36,255:13,0 chr2 204304959 . C . PASS END=204304977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:17,0 chr2 204304978 . A . PASS END=204304978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 204304979 . G . PASS END=204305004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr2 204305005 . T . PASS END=204305005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,529:0,37,255:16,0 chr2 204305006 . C . PASS END=204305010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:18,0 chr2 204305011 . C . PASS END=204305017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:24,0 chr2 204305018 . G . PASS END=204305018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 204305019 . C . PASS END=204305033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,878:0,75,255:25,0 chr2 204305034 . G . PASS END=204305036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,776:0,42,255:23,0 chr2 204305037 . T . PASS END=204305048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,840:0,72,255:25,0 chr2 204305049 . G . PASS END=204305049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,836:0,42,255:21,0 chr2 204305050 . A . PASS END=204305074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,833:0,72,255:24,0 chr2 204305075 . A . PASS END=204305076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 204305077 . C . PASS END=204305103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,876:0,61,255:24,0 chr2 204305104 . C . PASS END=204305104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,762:0,45,255:21,0 chr2 204305105 . T . PASS END=204305107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:23,0 chr2 204305108 . G . PASS END=204305108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,813:0,23,255:20,0 chr2 204305109 . A . PASS END=204305110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:23,0 chr2 204305111 . A . PASS END=204305111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,707:0,19,255:21,0 chr2 204305112 . G . PASS END=204305115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 204305116 . A . PASS END=204305117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:16:23:0,16,576:0,16,255:20,0 chr2 204305118 . G . PASS END=204305126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:19,0 chr2 204305127 . G . PASS END=204305127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 204305128 . G . PASS END=204305133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 204305134 . A . PASS END=204305138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 204305139 . A . PASS END=204305139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr2 204305140 . G . PASS END=204305148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,734:0,66,255:22,0 chr2 204305149 . C . PASS END=204305150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:20,0 chr2 204305151 . G . PASS END=204305151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204305152 . G . PASS END=204305152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 204305153 . A . PASS END=204305153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,652:0,33,255:19,0 chr2 204305154 . G . PASS END=204305154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204305155 . G . PASS END=204305180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:18:0,40,613:0,40,255:19,0 chr2 204305181 . A . PASS END=204305187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 204305188 . T . PASS END=204305191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:20:0,45,675:0,60,255:19,0 chr2 204305192 . G . PASS END=204305192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:18,0 chr2 204305193 . C . PASS END=204305205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 204305206 . T . PASS END=204305206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 204305207 . G . PASS END=204305207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305208 . G . PASS END=204305208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 204305209 . G . PASS END=204305209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305210 . C . PASS END=204305210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 204305211 . T . PASS END=204305220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,631:0,54,255:19,0 chr2 204305221 . C . PASS END=204305221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:17,0 chr2 204305222 . T . PASS END=204305224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 204305225 . A . PASS END=204305225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr2 204305226 . G . PASS END=204305233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:19,0 chr2 204305234 . C . PASS END=204305234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:16,0 chr2 204305235 . T . LowGQ END=204305235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,490:12,0,255:15,0 chr2 204305236 . G . PASS END=204305241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,660:0,43,255:17,0 chr2 204305242 . C . PASS END=204305242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,480:0,4,255:14,0 chr2 204305243 . T . PASS END=204305243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305244 . A . PASS END=204305245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr2 204305246 . A . PASS END=204305246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,568:0,23,255:16,0 chr2 204305247 . T . PASS END=204305250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 204305251 . C . PASS END=204305251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,535:0,24,255:16,0 chr2 204305252 . T . PASS END=204305257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:18,0 chr2 204305258 . A . PASS END=204305258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,547:0,21,255:15,0 chr2 204305259 . G . PASS END=204305259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305260 . G . PASS END=204305261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,552:0,37,255:16,0 chr2 204305262 . T . PASS END=204305264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305265 . A . PASS END=204305265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:15,0 chr2 204305266 . A . PASS END=204305269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 204305270 . C . PASS END=204305271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 204305272 . G . PASS END=204305272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305273 . A . PASS END=204305273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,523:0,37,255:15,0 chr2 204305274 . G . PASS END=204305275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 204305276 . T . PASS END=204305276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:14,0 chr2 204305277 . T . LowGQ END=204305277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,455:12,0,255:13,0 chr2 204305278 . C . PASS END=204305278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,590:0,23,255:15,0 chr2 204305279 . C . PASS END=204305279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 204305280 . A . PASS END=204305280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr2 204305281 . T . PASS END=204305284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 204305285 . A . PASS END=204305285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,474:0,31,255:15,0 chr2 204305286 . G . PASS END=204305290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr2 204305291 . A . PASS END=204305291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr2 204305292 . G . PASS END=204305302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,605:0,40,255:17,0 chr2 204305303 . T . PASS END=204305303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 204305304 . G . PASS END=204305304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 204305305 . G . PASS END=204305305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr2 204305306 . A . PASS END=204305309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 204305310 . T . PASS END=204305310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 204305311 . G . PASS END=204305317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 204305318 . T . PASS END=204305318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:15,0 chr2 204305319 . A . PASS END=204305329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 204305330 . G . PASS END=204305330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 204305331 . A . PASS END=204305340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,698:0,44,255:18,0 chr2 204305341 . C . PASS END=204305341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 204305342 . C . PASS END=204305342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,631:0,21,255:19,0 chr2 204305343 . G . PASS END=204305344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 204305345 . T . PASS END=204305345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,678:0,32,255:18,0 chr2 204305346 . G . PASS END=204305346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,721:0,47,255:18,0 chr2 204305347 . A . PASS END=204305348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204305349 . A . PASS END=204305349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 204305350 . G . PASS END=204305350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204305351 . T . PASS END=204305351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:19,0 chr2 204305352 . G . PASS END=204305352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204305353 . G . PASS END=204305354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr2 204305355 . G . PASS END=204305355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204305356 . A . PASS END=204305356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 204305357 . G . PASS END=204305359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204305360 . A . PASS END=204305360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:19,0 chr2 204305361 . G . PASS END=204305365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 204305366 . T . PASS END=204305373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 204305374 . A . PASS END=204305374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:17,0 chr2 204305375 . G . PASS END=204305376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:18,0 chr2 204305377 . A . PASS END=204305377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:17,0 chr2 204305378 . G . PASS END=204305378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:18,0 chr2 204305379 . C . PASS END=204305379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:18,0 chr2 204305380 . T . PASS END=204305380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 204305381 . C . PASS END=204305381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:19,0 chr2 204305382 . T . PASS END=204305384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204305385 . T . PASS END=204305385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr2 204305386 . G . PASS END=204305386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 204305387 . C . PASS END=204305387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr2 204305388 . T . PASS END=204305390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:25,0 chr2 204305391 . G . PASS END=204305391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 204305392 . G . PASS END=204305392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:23,0 chr2 204305393 . T . PASS END=204305393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:28:25:0,28,784:0,28,255:22,0 chr2 204305394 . A . PASS END=204305394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,751:0,3,255:21,0 chr2 204305395 . A . PASS END=204305395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,825:0,61,255:24,0 chr2 204305396 . T . PASS END=204305397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:24,0 chr2 204305398 . T . LowGQ END=204305398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,696:10,0,255:21,0 chr2 204305399 . T . PASS END=204305399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,816:0,31,255:23,0 chr2 204305400 . G . PASS END=204305400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 204305401 . G . PASS END=204305401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,902:0,64,255:26,0 chr2 204305402 . C . PASS END=204305402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,855:0,34,255:25,0 chr2 204305403 . G . PASS END=204305403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:26,0 chr2 204305404 . G . PASS END=204305406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,878:0,64,255:26,0 chr2 204305407 . G . PASS END=204305408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:31:27:0,31,804:0,31,255:25,0 chr2 204305409 . A . LowGQ END=204305409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:0:28:0,0,737:5,0,255:24,0 chr2 204305410 . C . PASS END=204305410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,745:0,17,255:24,0 chr2 204305411 . T . PASS END=204305411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,889:0,34,255:23,0 chr2 204305412 . G . PASS END=204305413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:67:28:0,67,934:0,67,255:26,0 chr2 204305414 . A . PASS END=204305414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:25,0 chr2 204305415 . A . PASS END=204305415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,897:0,70,255:26,0 chr2 204305416 . C . PASS END=204305416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 204305417 . A . PASS END=204305417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,806:0,21,255:22,0 chr2 204305418 . G . PASS END=204305418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 204305419 . G . PASS END=204305419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:23,0 chr2 204305420 . A . PASS END=204305420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:20:29:0,20,762:0,20,255:21,0 chr2 204305421 . G . PASS END=204305421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 204305422 . G . PASS END=204305422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr2 204305423 . G . PASS END=204305424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1033:0,63,255:29,0 chr2 204305425 . T . PASS END=204305425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,955:0,46,255:27,0 chr2 204305426 . A . PASS END=204305426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:62:32:0,62,952:0,62,255:28,0 chr2 204305427 . G . PASS END=204305427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 204305428 . G . PASS END=204305428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:27,0 chr2 204305429 . G . PASS END=204305430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1164:0,83,255:30,0 chr2 204305431 . G . PASS END=204305431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:47:32:0,47,1059:0,47,255:27,0 chr2 204305432 . A . PASS END=204305432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,964:0,63,255:28,0 chr2 204305433 . G . PASS END=204305433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 204305434 . A . PASS END=204305434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,924:0,63,255:28,0 chr2 204305435 . G . PASS END=204305437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr2 204305438 . T . PASS END=204305438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1031:0,49,255:28,0 chr2 204305439 . G . PASS END=204305440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1172:0,83,255:30,0 chr2 204305441 . A . PASS END=204305441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 204305442 . A . PASS END=204305442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 204305443 . T . PASS END=204305443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1003:0,49,255:29,0 chr2 204305444 . G . PASS END=204305444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 204305445 . T . PASS END=204305445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,978:0,49,255:29,0 chr2 204305446 . A . PASS END=204305462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:33:0,82,1113:0,82,255:34,0 chr2 204305463 . G . PASS END=204305463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:32,0 chr2 204305464 . G . PASS END=204305532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1155:0,80,255:34,0 chr2 204305533 . C . PASS END=204305533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 204305534 . A . PASS END=204305534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:23,0 chr2 204305535 . G . PASS END=204305540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:24,0 chr2 204305541 . G . PASS END=204305541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:22,0 chr2 204305542 . T . PASS END=204305548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 204305549 . T . PASS END=204305553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:23:0,45,675:0,59,255:17,0 chr2 204305554 . C . PASS END=204305554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:16,0 chr2 204305555 . G . PASS END=204305559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:25:0,45,675:0,75,255:16,0 chr2 204305560 . T . PASS END=204305566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 204305567 . A . PASS END=204305568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 204305569 . G . PASS END=204305569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 204305570 . G . PASS END=204305570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 204305571 . G . PASS END=204305571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:13,0 chr2 204305572 . G . PASS END=204305572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 204305573 . T . LowGQ END=204305573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,443:27,0,255:14,0 chr2 204305574 . T . PASS END=204305574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:15,0 chr2 204305575 . T . LowGQ END=204305576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,488:0,0,255:14,0 chr2 204305577 . G . PASS END=204305581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:16,0 chr2 204305582 . A . LowGQ END=204305582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,347:40,0,255:12,0 chr2 204305583 . G . PASS END=204305583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:16,0 chr2 204305584 . C . LowGQ END=204305586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,6:17:0:17:0,0,172:21,0,255:13,0 chr2 204305587 . G . PASS END=204305587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 204305588 . G . PASS END=204305589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 204305590 . G . PASS END=204305590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,543:0,12,255:15,0 chr2 204305591 . A . LowGQ END=204305592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:0:17:0,0,216:4,0,255:14,0 chr2 204305593 . G . PASS END=204305593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 204305594 . G . PASS END=204305594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 204305595 . A . LowGQ END=204305595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,8:17:0:17:0,0,136:162,0,255:9,0 chr2 204305596 . G . PASS END=204305596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,554:0,51,255:17,0 chr2 204305597 . G . PASS END=204305597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:16,0 chr2 204305598 . G . PASS END=204305598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,488:0,18,255:15,0 chr2 204305599 . G . PASS END=204305599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr2 204305600 . T . LowGQ END=204305601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,269:5,0,255:17,0 chr2 204305602 . C . PASS END=204305602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,499:0,24,255:17,0 chr2 204305603 . A . LowGQ END=204305603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,7:19:0:19:0,0,283:103,0,255:12,0 chr2 204305604 . G . PASS END=204305605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,656:0,60,255:20,0 chr2 204305606 . G . PASS END=204305606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,582:0,27,255:18,0 chr2 204305607 . A . LowGQ END=204305609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,7:20:0:20:0,0,236:56,0,255:12,0 chr2 204305610 . G . PASS END=204305610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:17,0 chr2 204305611 . G . PASS END=204305611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,561:0,12,255:16,0 chr2 204305612 . A . LowGQ END=204305612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,8:20:0:20:0,0,206:161,0,255:10,0 chr2 204305613 . G . PASS END=204305614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:18,0 chr2 204305615 . A . LowGQ END=204305615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,7:20:0:20:0,0,342:56,0,255:11,0 chr2 204305616 . G . PASS END=204305617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,578:0,43,255:17,0 chr2 204305618 . T . LowGQ END=204305618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,8:20:0:20:0,0,187:196,0,255:10,0 chr2 204305619 . G . PASS END=204305619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,584:0,40,255:17,0 chr2 204305620 . G . PASS END=204305620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr2 204305621 . G . PASS END=204305622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 204305623 . G . LowGQ END=204305623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,452:24,0,255:16,0 chr2 204305624 . G . PASS END=204305624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 204305625 . G . PASS END=204305625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:17,0 chr2 204305626 . G . PASS END=204305626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,520:0,21,255:16,0 chr2 204305627 . T . LowGQ END=204305627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,8:18:0:18:0,0,197:93,0,255:10,0 chr2 204305628 . G . PASS END=204305628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,570:0,54,255:18,0 chr2 204305629 . T . LowGQ END=204305630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,7:18:0:18:0,0,289:46,0,255:12,0 chr2 204305631 . G . PASS END=204305631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:15,0 chr2 204305632 . G . PASS END=204305632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,482:0,21,255:14,0 chr2 204305633 . G . PASS END=204305634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,540:0,40,255:16,0 chr2 204305635 . G . LowGQ END=204305635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,390:46,0,255:13,0 chr2 204305636 . A . PASS END=204305636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,495:0,24,255:15,0 chr2 204305637 . G . LowGQ END=204305637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,390:24,0,255:13,0 chr2 204305638 . C . PASS END=204305642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr2 204305643 . T . PASS END=204305643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,537:0,24,255:16,0 chr2 204305644 . G . PASS END=204305647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:40:19:0,40,615:0,40,255:20,0 chr2 204305648 . A . PASS END=204305650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204305651 . A . PASS END=204305671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,637:0,43,255:19,0 chr2 204305672 . C . PASS END=204305679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 204305680 . G . PASS END=204305688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 204305689 . C . PASS END=204305690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204305691 . C . PASS END=204305708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,662:0,57,255:19,0 chr2 204305709 . G . PASS END=204305715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 204305716 . A . PASS END=204305735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,630:0,45,255:19,0 chr2 204305736 . G . PASS END=204305736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 204305737 . C . PASS END=204305753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:12:0,33,421:0,36,255:13,0 chr2 204305754 . G . PASS END=204305757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 204305758 . G . PASS END=204305758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 204305759 . G . PASS END=204305759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 204305760 . G . PASS END=204305760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,465:0,11,255:13,0 chr2 204305761 . G . PASS END=204305761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 204305762 . T . LowGQ END=204305762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,418:32,0,255:13,0 chr2 204305763 . G . PASS END=204305764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,565:0,32,255:16,0 chr2 204305765 . A . PASS END=204305765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:4:17:0,4,512:0,4,255:15,0 chr2 204305766 . G . PASS END=204305767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 204305768 . A . LowGQ END=204305768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,382:43,0,255:14,0 chr2 204305769 . G . PASS END=204305769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 204305770 . G . PASS END=204305770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:16,0 chr2 204305771 . G . PASS END=204305771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 204305772 . G . PASS END=204305772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 204305773 . G . PASS END=204305773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 204305774 . A . PASS END=204305774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,502:0,18,255:15,0 chr2 204305775 . G . PASS END=204305777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,584:0,51,255:17,0 chr2 204305778 . G . PASS END=204305778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 204305779 . G . PASS END=204305779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 204305780 . T . PASS END=204305780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,498:0,7,255:16,0 chr2 204305781 . G . PASS END=204305783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:17,0 chr2 204305784 . G . PASS END=204305784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 204305785 . G . PASS END=204305785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,529:0,7,255:16,0 chr2 204305786 . A . PASS END=204305786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr2 204305787 . A . LowGQ END=204305787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:14,0 chr2 204305788 . C . PASS END=204305789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 204305790 . A . PASS END=204305790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 204305791 . C . PASS END=204305791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 204305792 . T . PASS END=204305792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:4:18:0,4,532:0,4,255:13,0 chr2 204305793 . C . PASS END=204305793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:17,0 chr2 204305794 . C . PASS END=204305795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:18,0 chr2 204305796 . T . PASS END=204305796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,560:0,13,255:16,0 chr2 204305797 . T . PASS END=204305797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,537:0,24,255:16,0 chr2 204305798 . G . PASS END=204305811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,643:0,40,255:18,0 chr2 204305812 . T . PASS END=204305812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 204305813 . C . PASS END=204305817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 204305818 . G . PASS END=204305818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 204305819 . C . PASS END=204305846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,637:0,40,255:19,0 chr2 204305847 . G . PASS END=204305847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr2 204305848 . G . PASS END=204305856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,637:0,40,255:17,0 chr2 204305857 . G . PASS END=204305857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 204305858 . C . PASS END=204305858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,612:0,23,255:16,0 chr2 204305859 . T . PASS END=204305859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 204305860 . T . PASS END=204305863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305864 . C . PASS END=204305864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 204305865 . A . PASS END=204305866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204305867 . G . PASS END=204305867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr2 204305868 . G . PASS END=204305871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 204305872 . C . PASS END=204305872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,582:0,20,255:14,0 chr2 204305873 . T . PASS END=204305873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 204305874 . G . PASS END=204305874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 204305875 . A . PASS END=204305875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:13,0 chr2 204305876 . A . PASS END=204305878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 204305879 . C . PASS END=204305882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 204305883 . G . PASS END=204305884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 204305885 . C . PASS END=204305885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 204305886 . G . PASS END=204305886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 204305887 . C . PASS END=204305887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 204305888 . A . PASS END=204305890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 204305891 . C . PASS END=204305897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,34,255:13,0 chr2 204305898 . C . PASS END=204305901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,405:0,26,255:9,0 chr2 204305902 . T . PASS END=204305914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 204305915 . C . PASS END=204305915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 204305916 . T . PASS END=204305920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 204305921 . G . PASS END=204305921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 204305922 . A . PASS END=204305923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 204305924 . C . PASS END=204305925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 204305926 . T . PASS END=204305931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 204305932 . C . PASS END=204305932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 204305933 . T . PASS END=204305936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 204305937 . G . PASS END=204305937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 204305938 . A . PASS END=204305940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 204305941 . C . PASS END=204305944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 204305945 . A . PASS END=204305945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 204305946 . G . PASS END=204305960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,515:0,45,255:17,0 chr2 204305961 . C . PASS END=204305961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 204305962 . T . PASS END=204305964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 204305965 . G . PASS END=204305965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 204305966 . G . PASS END=204305966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 204305967 . A . PASS END=204305968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 204305969 . T . PASS END=204305974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:15:0,31,535:0,31,255:13,0 chr2 204305975 . A . LowGQ END=204305975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,480:7,0,255:12,0 chr2 204305976 . G . PASS END=204305977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 204305978 . A . PASS END=204305978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:7:18:0,7,512:0,7,255:12,0 chr2 204305979 . G . PASS END=204305979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 204305980 . G . PASS END=204305980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 204305981 . G . PASS END=204305981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 204305982 . G . PASS END=204305983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:13,0 chr2 204305984 . T . LowGQ END=204305984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,504:1,0,255:12,0 chr2 204305985 . G . PASS END=204305986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:13,0 chr2 204305987 . T . LowGQ END=204305987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:18:0,0,429:32,0,255:11,0 chr2 204305988 . G . PASS END=204305988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:13,0 chr2 204305989 . G . PASS END=204305989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 204305990 . A . LowGQ END=204305990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,4:16:0:16:0,0,324:63,0,255:10,0 chr2 204305991 . G . PASS END=204305991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 204305992 . G . PASS END=204305992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 204305993 . G . PASS END=204305994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:15,0 chr2 204305995 . G . PASS END=204305995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,535:0,34,255:15,0 chr2 204305996 . T . LowGQ END=204305996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,4:17:0:17:0,0,298:80,0,255:12,0 chr2 204305997 . G . PASS END=204305997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 204305998 . G . LowGQ END=204305999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,5:17:0:17:0,0,286:0,0,255:14,0 chr2 204306000 . G . PASS END=204306000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr2 204306001 . G . LowGQ END=204306002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,5:17:0:17:0,0,316:0,0,255:13,0 chr2 204306003 . G . PASS END=204306003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:15,0 chr2 204306004 . G . LowGQ END=204306005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,5:17:0:17:0,0,292:15,0,255:12,0 chr2 204306006 . G . PASS END=204306006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 204306007 . G . LowGQ END=204306008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,5:18:0:17:0,0,316:0,0,255:13,0 chr2 204306009 . G . PASS END=204306009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 204306010 . G . PASS END=204306010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 204306011 . T . LowGQ END=204306011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,4:18:0:18:0,0,373:71,0,255:14,1 chr2 204306012 . G . PASS END=204306013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:18,1 chr2 204306014 . G . PASS END=204306014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,662:0,57,255:19,0 chr2 204306015 . G . PASS END=204306015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:17,0 chr2 204306016 . G . PASS END=204306016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,639:0,57,255:19,0 chr2 204306017 . T . LowGQ END=204306017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,515:13,0,255:17,0 chr2 204306018 . G . PASS END=204306019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,625:0,57,255:19,0 chr2 204306020 . C . PASS END=204306020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,559:0,2,255:17,0 chr2 204306021 . G . PASS END=204306025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,659:0,41,255:18,0 chr2 204306026 . A . PASS END=204306026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,550:0,2,255:15,0 chr2 204306027 . G . PASS END=204306029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,681:0,41,255:17,0 chr2 204306030 . A . PASS END=204306030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,574:0,24,255:15,0 chr2 204306031 . G . PASS END=204306038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:18:0,41,651:0,41,255:17,0 chr2 204306039 . G . PASS END=204306039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:14,0 chr2 204306040 . A . PASS END=204306040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 204306041 . A . PASS END=204306041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:14,0 chr2 204306042 . G . PASS END=204306057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,516:0,40,255:17,0 chr2 204306058 . A . PASS END=204306058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,499:0,24,255:14,0 chr2 204306059 . G . PASS END=204306060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 204306061 . G . PASS END=204306061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:16,0 chr2 204306062 . G . PASS END=204306062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,615:0,40,255:17,0 chr2 204306063 . G . PASS END=204306063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 204306064 . T . PASS END=204306067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 204306068 . T . PASS END=204306068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr2 204306069 . A . PASS END=204306070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 204306071 . C . PASS END=204306071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:16,0 chr2 204306072 . T . PASS END=204306076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 204306077 . T . PASS END=204306077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,631:0,29,255:17,0 chr2 204306078 . T . PASS END=204306078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,537:0,37,255:17,0 chr2 204306079 . G . PASS END=204306079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 204306080 . C . LowGQ END=204306080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,543:1,0,255:14,0 chr2 204306081 . G . PASS END=204306093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,673:0,41,255:17,0 chr2 204306094 . G . PASS END=204306094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,556:0,35,255:15,0 chr2 204306095 . C . PASS END=204306096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 204306097 . C . PASS END=204306097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,518:0,18,255:14,0 chr2 204306098 . A . PASS END=204306103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 204306104 . A . PASS END=204306125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 204306126 . T . PASS END=204306136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:10:0,21,315:0,30,255:9,0 chr2 204306801 . T . PASS END=204306803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,221,255:40,0 chr2 204307322 . T . PASS END=204307396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:40:0,109,1406:0,109,255:40,0 chr2 204309573 . T . PASS END=204309655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:49:0,96,1718:0,96,255:40,0 chr2 204309656 . T . PASS END=204309656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:76:52:0,76,1676:0,76,255:38,0 chr2 204309657 . C . PASS END=204309724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:36:0,84,1260:0,91,255:40,0 chr2 204309725 . A . PASS END=204309725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:27,0 chr2 204309726 . C . PASS END=204309733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1260:0,87,255:29,0 chr2 204312682 . C . PASS END=204312802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,135,255:40,0 chr2 204313461 . C . PASS END=204313559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,111,1665:0,125,255:40,0 chr2 204319153 . C . PASS END=204319263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:41:0,106,1445:0,106,255:40,0 chr2 204320160 . C . PASS END=204320174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1056:0,90,255:31,0 chr2 204320175 . G . PASS END=204320175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:28,0 chr2 204320176 . G . PASS END=204320261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:31:0,84,1260:0,88,255:40,2 chr2 204320262 . T . PASS END=204320263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:60:42:0,60,1457:0,60,255:37,2 chr2 204320264 . C . PASS END=204320276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1357:0,98,255:37,0 chr2 204320277 . A . PASS END=204320277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:32,0 chr2 204320278 . G . PASS END=204320291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:82:33:0,82,1149:0,82,255:32,0 chr2 204320292 . A . PASS END=204320292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1131:0,66,255:28,0 chr2 204320293 . C . PASS END=204320295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:29,0 chr2 204320296 . A . PASS END=204320296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1038:0,65,255:28,0 chr2 204320297 . A . PASS END=204320297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 204320298 . A . PASS END=204320298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1018:0,79,255:28,0 chr2 204320299 . C . PASS END=204320299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 204320300 . A . PASS END=204320300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:26,0 chr2 204320301 . T . PASS END=204320303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:28,0 chr2 204322253 . C . PASS END=204322318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,120,255:40,0 chr2 204324630 . C . PASS END=204324751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:53:0,120,1800:0,129,255:40,0 chr2 204325972 . C . PASS END=204325972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:29,0 chr2 204325973 . C . PASS END=204325973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 204325974 . A . PASS END=204325974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,997:0,76,255:29,0 chr2 204325975 . T . PASS END=204326131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:87:31:0,87,1172:0,93,255:40,0 chr2 204326571 . C . PASS END=204326648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:62:0,120,1800:0,129,255:40,0 chr2 204334962 . C . PASS END=204335032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:40:0,89,1395:0,89,255:40,0 chr2 204335033 . A . PASS END=204335033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:28,0 chr2 204335034 . G . PASS END=204335036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 204341799 . A . PASS END=204341879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:36:0,98,1327:0,98,255:40,0 chr2 204354307 . C . PASS END=204354312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:42:21:0,42,762:0,42,255:22,0 chr2 204354313 . A . PASS END=204354320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,892:0,61,255:26,0 chr2 204354321 . G . PASS END=204354321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 204354322 . C . PASS END=204354322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr2 204354323 . C . PASS END=204354324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 204354325 . T . PASS END=204354325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,934:0,73,255:28,0 chr2 204354326 . T . PASS END=204354328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 204354329 . T . PASS END=204354329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr2 204354330 . G . PASS END=204354330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 204354331 . T . PASS END=204354331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 204354332 . G . PASS END=204354630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:31:0,90,1188:0,93,255:40,0 chr2 204354631 . T . PASS END=204354631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1397:0,68,255:40,0 chr2 204354632 . A . PASS END=204354754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:40:0,81,1215:0,116,255:40,0 chr2 204354755 . G . PASS END=204354761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:70:29:0,70,950:0,70,255:26,0 chr2 204354762 . G . PASS END=204354764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 204354765 . C . PASS END=204354783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 204354784 . A . PASS END=204354792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:22:0,42,630:0,66,255:19,0 chr2 204354793 . C . PASS END=204354812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr2 204355937 . C . PASS END=204356042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:42:0,105,1575:0,109,255:40,0 chr2 204359957 . C . PASS END=204360076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,111,1665:0,129,255:40,0 chr2 204571247 . A . PASS END=204571340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:80:32:0,80,1155:0,80,255:40,0 chr2 204571420 . A . PASS END=204571471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:42:0,96,1440:0,111,255:40,0 chr2 204591356 . G . PASS END=204591363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr2 204591364 . A . PASS END=204591364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 204591365 . T . PASS END=204591381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:19,0 chr2 204591382 . C . PASS END=204591386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:26,0 chr2 204591387 . G . PASS END=204591387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr2 204591388 . C . PASS END=204591475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1031:0,84,255:40,0 chr2 204591476 . G . PASS END=204591512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,120,1800:0,150,255:40,0 chr2 204591513 . G A, 50.00 PASS DP=65;MQ=250.00;MQRankSum=6.902;ReadPosRankSum=5.862;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,35,0:0.538,0.000:65:17,18,0:13,17,0:48:85,0,50,1217,1051,2269:255,0,255:28,0:5.0000e+01,6.7822e-05,5.2521e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:23,7,22,13:14,16,21,14 chr2 204591514 . A . PASS END=204591550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:61:0,120,1800:0,173,255:40,0 chr2 204591551 . G . PASS END=204591712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:45:0,120,1800:0,135,255:40,0 chr2 204594371 . G . PASS END=204594495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:33:0,87,1227:0,88,255:40,0 chr2 204599507 . G . PASS END=204599525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr2 204599526 . G . PASS END=204599530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr2 204599531 . C . PASS END=204599549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:18,0 chr2 204599550 . A . PASS END=204599550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,556:0,37,255:17,0 chr2 204599551 . C . PASS END=204599564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr2 204599565 . G . PASS END=204599568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 204599569 . C . PASS END=204599569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 204599570 . G . PASS END=204599581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 204599582 . A . PASS END=204599582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 204599583 . A . PASS END=204599588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 204599589 . A . PASS END=204599600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:19:0,50,714:0,50,255:19,0 chr2 204599601 . C . PASS END=204599601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 204599602 . C . PASS END=204599605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 204599606 . C . PASS END=204599609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204599610 . G . PASS END=204599611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,727:0,47,255:20,0 chr2 204599612 . G . PASS END=204599612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204599613 . A . PASS END=204599615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 204599616 . T . PASS END=204599618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 204599619 . C . PASS END=204599629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 204599630 . T . PASS END=204599630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,647:0,24,255:18,0 chr2 204599631 . C . PASS END=204599635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 204731005 . A G, 49.05 PASS DP=47;MQ=250.00;MQRankSum=5.750;ReadPosRankSum=5.218;FractionInformativeReads=0.979;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,20,0:0.435,0.000:46:12,9,0:14,11,0:46:84,0,47,184,184,184:255,0,255:24,0:4.9053e+01,9.7332e-05,5.0000e+01,1.8382e+02,2.1859e+02,1.8683e+02:0.00,34.77,37.78,34.77,69.54,37.78:16,10,10,10:10,16,11,9 chr2 204732204 . C . PASS END=204732204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1278:0,89,255:34,0 chr2 204732662 . A . PASS END=204732662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1126:0,96,255:32,0 chr2 204732666 . A . PASS END=204732770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1247:0,81,255:40,0 chr2 204732771 . A . PASS END=204732775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,79,255:24,0 chr2 204735307 . A . PASS END=204735307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 204735309 . C . PASS END=204735313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 204735314 . C . PASS END=204735329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr2 204735330 . C . PASS END=204735367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,598:0,48,255:18,0 chr2 204735368 . G . PASS END=204735376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:24,0 chr2 204735377 . T . PASS END=204735377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,798:0,20,255:23,0 chr2 204735378 . A . PASS END=204735381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1062:0,84,255:29,0 chr2 204735382 . A . PASS END=204735382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 204735383 . T . PASS END=204735388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr2 204735389 . G . PASS END=204735389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:29,0 chr2 204735390 . G . PASS END=204735390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 204735391 . C . PASS END=204735391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 204735392 . A . PASS END=204735394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 204735395 . G . PASS END=204735395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 204735396 . C . PASS END=204735609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:30:0,83,1164:0,83,255:40,0 chr2 204735610 . G . PASS END=204735610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:30,0 chr2 204735611 . C . PASS END=204735616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:31,0 chr2 204735617 . T . PASS END=204735617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1127:0,55,255:26,0 chr2 204735618 . A . PASS END=204735620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr2 204735621 . T . PASS END=204735621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1074:0,65,255:26,0 chr2 204735622 . G . PASS END=204735630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1033:0,84,255:28,0 chr2 204735631 . C . PASS END=204735631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 204735632 . A . PASS END=204735640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,971:0,84,255:28,0 chr2 204735641 . C . PASS END=204735644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 204735645 . T . PASS END=204735646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,911:0,54,255:24,0 chr2 204735647 . T . PASS END=204735651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 204735652 . A . PASS END=204735652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 204735653 . A . PASS END=204735654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 204735655 . T . PASS END=204735655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:22,0 chr2 204735656 . G . PASS END=204735656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 204735660 . A . PASS END=204735660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 204735662 . C . PASS END=204735662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 204736100 . G . PASS END=204736211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:54:0,120,1800:0,158,255:40,0 chr2 204736213 . G . PASS END=204736213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 204736215 . G . PASS END=204736215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,196,255:40,0 chr2 204737431 . C . PASS END=204737535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:46:0,103,1714:0,103,255:40,1 chr2 204738919 . G A, 48.23 PASS DP=54;MQ=250.00;MQRankSum=6.228;ReadPosRankSum=1.662;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,23,0:0.426,0.000:54:18,16,0:13,7,0:47:83,0,50,822,1080,1903:255,0,255:32,0:4.8234e+01,8.6978e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,19,9,14:17,14,8,15 chr2 204801514 . G . PASS END=204801514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 204801538 . A . PASS END=204801596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:56:0,120,1800:0,158,255:40,0 chr2 204801604 . T . PASS END=204801604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 204820359 . G . PASS END=204820379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,100,1133:0,100,255:40,0 chr2 204820380 . A . PASS END=204820380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:70:42:0,70,1271:0,70,255:39,0 chr2 204820381 . T . PASS END=204820694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:97:42:0,97,1501:0,97,255:40,0 chr2 204820696 . T . PASS END=204820696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 204821382 . A . PASS END=204821456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,134,255:40,0 chr2 204821457 . G . PASS END=204821488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:56:0,120,1800:0,155,255:40,0 chr2 204821494 . C T, 49.00 PASS DP=56;MQ=250.00;MQRankSum=6.378;ReadPosRankSum=4.862;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,25,0:0.446,0.000:56:17,11,0:14,14,0:48:84,0,50,894,1109,2003:255,0,255:28,0:4.8999e+01,7.6364e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,24,7,18:11,20,13,12 chr2 204822522 . A . PASS END=204822523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 204822524 . G . PASS END=204822606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:29:0,84,1056:0,86,255:40,0 chr2 204822608 . T . PASS END=204822609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:39,0 chr2 204824309 . A . PASS END=204824322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:75:0,120,1800:0,187,255:40,0 chr2 204824721 . G . PASS END=204824721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr2 204824796 . G . PASS END=204824796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 204824834 . T . PASS END=204824834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 204824916 . C . PASS END=204824916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 204825253 . A . PASS END=204825253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr2 204825261 . A . PASS END=204825261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 204825299 . T . PASS END=204825299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 204825317 . C . PASS END=204825317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 204825326 . C . PASS END=204825326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 204825347 . A . PASS END=204825347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 204825415 . C . PASS END=204825416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 204825459 . C . PASS END=204825459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 204825494 . G . PASS END=204825494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204825591 . A . PASS END=204825591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 204825615 . T . PASS END=204825615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 204825622 . C . PASS END=204825622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 204825738 . G . PASS END=204825738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 204825779 . A . PASS END=204825779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 204826176 . G . PASS END=204826176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 204826191 . A . PASS END=204826191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 204826223 . A . PASS END=204826223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 204826270 . G . PASS END=204826270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,202,255:40,0 chr2 205410723 . A . PASS END=205410768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:26,0 chr2 205410769 . G . PASS END=205410769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 205410770 . C . PASS END=205410770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 205410771 . A . PASS END=205410774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 205410775 . A . PASS END=205410799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 205410800 . C . PASS END=205410801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 205410802 . C . PASS END=205410823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 205410824 . C . PASS END=205410828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 205410829 . A . PASS END=205410829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr2 205410830 . G . PASS END=205410830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 205410831 . A . PASS END=205410831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:23:29:0,23,807:0,23,255:25,0 chr2 205410832 . C . PASS END=205410833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 205410834 . C . PASS END=205410837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 205410838 . A . PASS END=205410840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 205410841 . A . PASS END=205410841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 205410842 . G . PASS END=205410843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 205410844 . T . PASS END=205410844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 205410845 . G . PASS END=205410848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr2 205410849 . G . PASS END=205410849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr2 205410850 . C . PASS END=205410850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 205410851 . G . PASS END=205410870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:25:0,69,1035:0,75,255:26,0 chr2 205410871 . G . PASS END=205410871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:21,0 chr2 205410872 . G . PASS END=205410894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:26,0 chr2 205533182 . A . PASS END=205533325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:56:0,120,1800:0,138,255:40,0 chr2 205550904 . G . PASS END=205551005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,153,255:40,0 chr2 205779263 . A . PASS END=205779316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,213,255:40,0 chr2 205823190 . A . PASS END=205823375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:49:0,120,1800:0,133,255:40,0 chr2 205829875 . C . PASS END=205829883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:25,0 chr2 205829884 . G . PASS END=205829889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:29,0 chr2 205829890 . G . PASS END=205829890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 205829891 . A . PASS END=205829953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1102:0,82,255:36,0 chr2 205829954 . C . PASS END=205829967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1217:0,96,255:32,0 chr2 205829968 . A . PASS END=205829990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:61:25:0,61,1035:0,61,255:26,0 chr2 205829991 . C T, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,14:0,0,12,13 chr2 205829992 . G . PASS END=205830002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 205830003 . A . PASS END=205830003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:21,0 chr2 205830004 . A . PASS END=205830016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 205830017 . T . PASS END=205830028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:19:0,50,765:0,50,255:19,0 chr2 205830029 . C . PASS END=205830040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 205830041 . A . PASS END=205830041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:13,0 chr2 205830042 . A . PASS END=205830043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 205830044 . T . PASS END=205830046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 205912304 . G . PASS END=205912413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:29:0,84,1078:0,86,255:40,0 chr2 205958824 . A . PASS END=205958826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 205969150 . G . PASS END=205969182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:69:0,120,1800:0,207,255:40,0 chr2 205969183 . T . PASS END=205969219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,1:81:99:75:0,120,1800:0,209,255:40,0 chr2 205969220 . G A, 48.27 PASS DP=75;MQ=249.79;MQRankSum=7.365;ReadPosRankSum=2.512;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,32,0:0.427,0.000:75:23,18,0:20,14,0:47:83,0,50,1136,1480,2617:255,0,255:39,0:4.8267e+01,8.6460e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,25,12,20:28,15,14,18 chr2 205969221 . A . PASS END=205969238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,189,255:40,0 chr2 205978215 . T . PASS END=205978301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:48:0,105,1575:0,137,255:40,0 chr2 205983645 . G . PASS END=205983770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:36:0,105,1575:0,108,255:40,0 chr2 205986315 . G . PASS END=205986673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:36:0,84,1275:0,84,255:40,0 chr2 205989051 . G . PASS END=205989060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:32:0,86,1209:0,86,255:34,0 chr2 205989061 . A . PASS END=205989061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr2 205989062 . C . PASS END=205989174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:34:0,84,1233:0,84,255:40,0 chr2 205989175 . G . PASS END=205989175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:34,0 chr2 205989176 . G . PASS END=205989186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:34,0 chr2 205989187 . G . PASS END=205989187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1269:0,75,255:30,0 chr2 205989188 . G . PASS END=205989190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,92,255:30,0 chr2 205990333 . G . PASS END=205990352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:35:0,87,1213:0,87,255:40,0 chr2 205990353 . C T, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.224;ReadPosRankSum=2.486;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,25,0:0.625,0.000:40:9,13,0:6,12,0:46:85,0,45,784,536,1320:255,0,255:15,0:5.0000e+01,1.1157e-04,4.8049e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,15,10:5,10,13,12 chr2 205990354 . G . PASS END=205990390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:99:41:0,105,1502:0,105,255:40,0 chr2 205990391 . G . PASS END=205990447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:36:0,99,1485:0,104,255:40,0 chr2 205990448 . T . PASS END=205990449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1236:0,72,255:33,0 chr2 205990450 . C . PASS END=205990461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:94:36:0,94,1092:0,94,255:36,0 chr2 206023446 . A . PASS END=206023454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,654:0,57,255:19,0 chr2 206023455 . C . PASS END=206023461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,790:0,63,255:23,0 chr2 206023462 . G . PASS END=206023463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 206023464 . T . PASS END=206023464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:26,0 chr2 206023465 . G . PASS END=206023465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206023466 . T . PASS END=206023466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 206023467 . G . PASS END=206023469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206023470 . C . PASS END=206023470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 206023471 . T . PASS END=206023472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 206023473 . T . PASS END=206023473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 206023474 . C . PASS END=206023501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1225:0,86,255:40,0 chr2 206023502 . T . PASS END=206023502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:69:45:0,69,1390:0,69,255:40,0 chr2 206023503 . G . PASS END=206023606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:40:0,81,1373:0,81,255:40,0 chr2 206023607 . C . PASS END=206023607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:36,0 chr2 206023608 . A . PASS END=206023625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,92,255:37,0 chr2 206023626 . T . PASS END=206023626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 206023627 . T . PASS END=206023631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:36:0,81,1215:0,92,255:28,0 chr2 206036935 . G . PASS END=206036935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 206036936 . A . PASS END=206036936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 206036937 . T . PASS END=206036950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:32,0 chr2 206036951 . T . PASS END=206036951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 206036952 . G . PASS END=206036955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 206036956 . G . PASS END=206036964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1164:0,83,255:34,0 chr2 206036965 . A . PASS END=206036965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1203:0,66,255:34,0 chr2 206036966 . T . PASS END=206037067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1213:0,89,255:40,0 chr2 206037068 . A . PASS END=206037077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:26,0 chr2 206037078 . T . PASS END=206037098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:18:0,41,630:0,41,255:19,0 chr2 206037099 . A . PASS END=206037105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 206041169 . G . PASS END=206041301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:35:0,93,1395:0,105,255:40,2 chr2 206050488 . G . PASS END=206050587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,111,1764:0,111,255:40,0 chr2 206051926 . C . PASS END=206051938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,0:89:99:85:0,120,1800:0,240,255:40,0 chr2 206057929 . C . PASS END=206058044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:43:0,113,1513:0,113,255:40,0 chr2 206110502 . T . PASS END=206110546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,148,255:40,0 chr2 206165254 . A . PASS END=206165385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:32:0,87,1305:0,96,255:40,0 chr2 206165386 . G . PASS END=206165386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:31,0 chr2 206165387 . A . PASS END=206165405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:33,0 chr2 206165406 . A . PASS END=206165406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1168:0,69,255:29,0 chr2 206165407 . G . PASS END=206165422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:30,0 chr2 206165423 . T . PASS END=206165425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,1 chr2 206165426 . C . PASS END=206165437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 206165438 . T . PASS END=206165460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 206166188 . A . PASS END=206166341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:44:0,120,1800:0,128,255:40,0 chr2 206166342 . G . PASS END=206166371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,156,255:40,0 chr2 206166372 . G . PASS END=206166372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,6:75:52:75:0,52,2122:0,52,255:40,0 chr2 206166373 . A . PASS END=206166375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:75:0,102,1800:0,102,255:40,0 chr2 206166376 . G . PASS END=206166376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,9:76:64:76:0,64,1976:0,64,255:40,0 chr2 206166377 . A . PASS END=206166378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:72:0,120,1800:0,216,255:40,0 chr2 206166379 . G . LowGQ END=206166379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,17:72:0:72:0,0,1309:110,0,255:40,0 chr2 206166380 . A . PASS END=206166380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,215,255:40,0 chr2 206166381 . T . LowGQ END=206166381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,12:70:0:70:0,0,1535:41,0,255:40,0 chr2 206166382 . C . PASS END=206166384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,194,255:40,0 chr2 206166385 . G . PASS END=206166385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,7:70:56:70:0,56,1767:0,56,255:40,0 chr2 206166386 . A . PASS END=206166416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:67:0,120,1800:0,171,255:40,0 chr2 206166417 . C . PASS END=206166474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,134,255:40,0 chr2 206166503 . A . PASS END=206166542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:45:0,114,1721:0,114,255:40,0 chr2 206166543 . A . PASS END=206166579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,99,1451:0,99,255:40,0 chr2 206166580 . G A, 49.80 PASS DP=42;MQ=250.00;MQRankSum=5.528;ReadPosRankSum=4.218;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,20,0:0.476,0.000:42:10,11,0:12,9,0:48:85,0,50,715,763,1478:255,0,255:19,0:4.9804e+01,6.7304e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,18,9,11:16,6,10,10 chr2 206166581 . G . PASS END=206166617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:35:0,84,1260:0,98,255:37,0 chr2 206166618 . G . PASS END=206166622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1350:0,99,255:30,0 chr2 206166623 . C . PASS END=206166631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,74,255:22,0 chr2 206209722 . A . PASS END=206209830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:36:0,99,1575:0,99,255:40,0 chr2 206265737 . A . PASS END=206265847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,3:72:99:48:0,105,1589:0,105,255:40,0 chr2 206305094 . G . PASS END=206305383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:29:0,81,1215:0,84,255:40,1 chr2 206305384 . T . PASS END=206305396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,70,255:26,0 chr2 206364620 . T . PASS END=206364699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:51:0,120,1800:0,145,255:40,0 chr2 206364700 . C . PASS END=206364736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:61:0,120,1800:0,161,255:40,0 chr2 206364737 . T C, 46.74 PASS DP=62;MQ=250.00;MQRankSum=6.630;ReadPosRankSum=3.100;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,25,0:0.403,0.000:62:14,9,0:23,16,0:46:82,0,50,860,1270,2131:255,0,255:36,0:4.6744e+01,1.1364e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,24,8,17:24,13,16,9 chr2 206364738 . G . PASS END=206364755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:87:49:0,87,1305:0,147,255:40,1 chr2 206418048 . G . PASS END=206418069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:37:0,108,1620:0,111,255:40,0 chr2 206418070 . G . PASS END=206418127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,108,1620:0,111,255:40,0 chr2 206474012 . T C, 178.07 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,22,0:0,22,0:128:216,131,0,1601,131,1601:255,132,0:0,0:1.7807e+02,1.2807e+02,0.0000e+00,4.5000e+02,1.6284e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,16:0,0,24,20 chr2 206474920 . G . PASS END=206475019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:39:0,100,1214:0,100,255:40,0 chr2 206480180 . G . PASS END=206480298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:33:0,93,1365:0,98,255:40,0 chr2 206480299 . C . PASS END=206480299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:30,0 chr2 206480300 . C . PASS END=206480316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1161:0,80,255:30,0 chr2 206480317 . G . PASS END=206480350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,67,255:26,0 chr2 206480351 . A . PASS END=206480351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,601:0,25,255:18,0 chr2 206480352 . C . PASS END=206480356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 206480357 . G . LowGQ END=206480357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,502:14,0,255:15,0 chr2 206480358 . C . PASS END=206480359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 206480360 . A . PASS END=206480360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 206480361 . G . PASS END=206480361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:3:23:0,3,582:0,3,255:15,0 chr2 206480362 . C . PASS END=206480362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 206480363 . T . PASS END=206480363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,576:0,19,255:16,0 chr2 206480364 . C . PASS END=206480366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 206480367 . C . PASS END=206480368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,736:0,52,255:19,0 chr2 206480369 . G . PASS END=206480369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,707:0,28,255:19,0 chr2 206480370 . C . PASS END=206480375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:25:0,64,826:0,64,255:24,0 chr2 206480376 . G . PASS END=206480376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:14:27:0,14,706:0,14,255:20,0 chr2 206480377 . G . PASS END=206480377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 206480378 . A . PASS END=206480378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:19:25:0,19,725:0,19,255:22,0 chr2 206480379 . C . PASS END=206480379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:23,0 chr2 206480380 . C . PASS END=206480381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 206480382 . T . LowGQ END=206480382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,653:11,0,255:21,0 chr2 206480383 . T . PASS END=206480384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 206480385 . C . PASS END=206480385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,654:0,25,255:22,0 chr2 206480386 . G . PASS END=206480386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,803:0,58,255:24,0 chr2 206480387 . A . PASS END=206480390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 206480391 . G . PASS END=206480392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:12:26:0,12,718:0,12,255:23,0 chr2 206480393 . C . PASS END=206480393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,3:27:9:27:0,9,806:0,9,255:23,0 chr2 206480394 . G . PASS END=206480396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,886:0,64,255:25,0 chr2 206480397 . C . PASS END=206480397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:15:27:0,15,729:0,15,255:20,0 chr2 206480398 . C . PASS END=206480398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,786:0,23,255:23,0 chr2 206480399 . G . PASS END=206480408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,864:0,61,255:26,0 chr2 206480409 . C . PASS END=206480410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,935:0,81,255:28,0 chr2 206480411 . C . PASS END=206480411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,984:0,45,255:26,0 chr2 206480412 . C . PASS END=206480413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr2 206480414 . G . PASS END=206480414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,976:0,57,255:26,0 chr2 206480415 . C . PASS END=206480419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 206480420 . A . PASS END=206480420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,903:0,57,255:26,0 chr2 206480421 . A . PASS END=206480421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 206480422 . G . PASS END=206480422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 206480423 . A . PASS END=206480424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 206480425 . T . PASS END=206480425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:26,0 chr2 206480426 . G . PASS END=206480426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 206480427 . C . PASS END=206480427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,969:0,40,255:27,0 chr2 206480428 . C . PASS END=206480430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 206480431 . C . PASS END=206480431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1033:0,56,255:28,0 chr2 206480432 . C . PASS END=206480432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 206480433 . T . PASS END=206480433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,942:0,70,255:27,0 chr2 206480434 . A . PASS END=206480435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1111:0,90,255:30,0 chr2 206480436 . C . PASS END=206480436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr2 206480437 . A . PASS END=206480441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1141:0,90,255:31,0 chr2 206480442 . A . PASS END=206480442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 206480443 . C . PASS END=206480449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1163:0,80,255:33,0 chr2 206480450 . A . PASS END=206480450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1141:0,47,255:31,0 chr2 206480451 . C . PASS END=206480460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1208:0,83,255:33,0 chr2 206480461 . G . PASS END=206480461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:30,0 chr2 206480462 . T . PASS END=206480468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr2 206480469 . A . PASS END=206480469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,999:0,63,255:30,0 chr2 206480470 . G . PASS END=206480481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:36,0 chr2 206480482 . A . PASS END=206480482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1189:0,78,255:31,0 chr2 206480483 . C . PASS END=206480491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1350:0,99,255:31,0 chr2 206480492 . A . PASS END=206480492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:31,0 chr2 206480493 . A . PASS END=206480501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 206480502 . T . PASS END=206480502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 206480503 . C . PASS END=206480503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 206480504 . C . PASS END=206480504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 206480505 . C . PASS END=206480508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1164:0,93,255:31,0 chr2 206480509 . A . PASS END=206480509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 206480510 . G . PASS END=206480511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 206480512 . A . PASS END=206480512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:27,0 chr2 206480513 . G . PASS END=206480513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 206480514 . A . PASS END=206480516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 206480517 . C . PASS END=206480529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1117:0,87,255:30,0 chr2 206480530 . C . PASS END=206480537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:25,0 chr2 206548015 . A . PASS END=206548087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,116,1568:0,116,255:40,0 chr2 206562268 . A . PASS END=206562274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr2 206562275 . G . PASS END=206562287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 206562288 . T . PASS END=206562298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 206562299 . A . PASS END=206562306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 206562307 . G . PASS END=206562307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 206562308 . C . PASS END=206562319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 206562320 . T . PASS END=206562322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 206562323 . C . PASS END=206562326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 206562327 . T . PASS END=206562327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 206562328 . A . PASS END=206562334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr2 206562335 . G . PASS END=206562347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:24,0 chr2 206562348 . C . PASS END=206562348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 206562349 . A . PASS END=206562349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:27,0 chr2 206562350 . C . PASS END=206562395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,991:0,90,255:32,0 chr2 206562396 . A . PASS END=206562396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,958:0,73,255:29,0 chr2 206562397 . T . PASS END=206562399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1064:0,90,255:31,0 chr2 206562400 . T . PASS END=206562400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 206562401 . C . PASS END=206562405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 206562406 . A . PASS END=206562406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 206562407 . C . PASS END=206562418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1089:0,93,255:31,0 chr2 206562419 . C . PASS END=206562422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 206562423 . G . PASS END=206562425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 206562426 . A . PASS END=206562426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 206562427 . T . PASS END=206562431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:27,0 chr2 206562432 . A . PASS END=206562445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:61:26:0,61,900:0,61,255:26,0 chr2 206580917 . G . PASS END=206580934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,746:0,63,255:24,0 chr2 206580935 . T . PASS END=206580935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 206580936 . C . PASS END=206580937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 206580938 . G . PASS END=206580939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 206580940 . A . PASS END=206580940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 206580941 . T . PASS END=206580941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 206580942 . G . PASS END=206580942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 206580943 . G . PASS END=206580995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:30:0,89,1083:0,89,255:34,0 chr2 206580996 . C . PASS END=206581014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1305:0,96,255:31,0 chr2 206581015 . G . PASS END=206581015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:29,0 chr2 206581016 . C . PASS END=206581025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1185:0,80,255:31,0 chr2 206581026 . T . PASS END=206581027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 206581028 . C . PASS END=206581032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 206581033 . G A, 138.90 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,17,0:0,14,0:89:177,92,0,277,277,277:255,93,0:0,0:1.3890e+02,8.8900e+01,0.0000e+00,2.7367e+02,3.0844e+02,2.7668e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,17:0,0,16,15 chr2 206581034 . G . PASS END=206581036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 206581037 . C . PASS END=206581038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:30:0,60,1008:0,60,255:26,0 chr2 206581039 . C . PASS END=206581040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 206581041 . T . PASS END=206581070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 206581071 . T . PASS END=206581075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 206581076 . G . PASS END=206581077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,798:0,53,255:20,0 chr2 206581078 . G . PASS END=206581078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:19,0 chr2 206581079 . C . PASS END=206581080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 206581081 . A . PASS END=206581081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:19,0 chr2 206581082 . C . PASS END=206581085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 206581086 . A . PASS END=206581086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,731:0,35,255:16,0 chr2 206581087 . T . PASS END=206581094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,721:0,49,255:19,0 chr2 206581095 . A . PASS END=206581095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr2 206581096 . C . PASS END=206581098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr2 206587202 . G . PASS END=206587231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,795:0,62,255:25,0 chr2 206587232 . G . PASS END=206587241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,972:0,81,255:31,0 chr2 206587242 . G . PASS END=206587242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr2 206587243 . A . PASS END=206587432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:31:0,82,1127:0,82,255:40,0 chr2 206588509 . T . PASS END=206588515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,695:0,63,255:25,0 chr2 206588516 . C . PASS END=206588516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 206588517 . C . PASS END=206588527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,909:0,62,255:26,0 chr2 206588528 . G . PASS END=206588551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1113:0,93,255:35,0 chr2 206588552 . T . PASS END=206588552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1114:0,66,255:34,0 chr2 206588553 . G . PASS END=206588616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1070:0,87,255:35,0 chr2 206588617 . A . PASS END=206588617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 206588618 . T . PASS END=206588624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206588625 . T . PASS END=206588625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 206588626 . C . PASS END=206588629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 206588630 . G . PASS END=206588634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr2 206588635 . A . PASS END=206588654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,701:0,49,255:19,0 chr2 206588655 . C . PASS END=206588664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:16:0,36,540:0,41,255:13,0 chr2 206590637 . A . PASS END=206590806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:35:0,99,1380:0,101,255:40,0 chr2 206592615 . G . PASS END=206592648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:18,0 chr2 206592649 . T . PASS END=206592657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,869:0,69,255:25,0 chr2 206592658 . A . PASS END=206592661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,909:0,75,255:25,0 chr2 206592662 . A . PASS END=206592662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 206592663 . G . PASS END=206592678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:25,0 chr2 206592679 . C . PASS END=206592681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,968:0,81,255:27,0 chr2 206592682 . A . PASS END=206592682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 206592683 . G . PASS END=206592694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1056:0,84,255:29,0 chr2 206592695 . T C, 50.00 PASS DP=29;MQ=250.00;MQRankSum=4.494;ReadPosRankSum=3.565;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,17,0:0.586,0.000:29:6,7,0:6,10,0:48:85,0,48,608,429,1037:255,0,255:12,0:5.0000e+01,7.6882e-05,5.1121e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,6,11:6,6,8,9 chr2 206592696 . G . PASS END=206592703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,975:0,90,255:31,0 chr2 206592704 . C . PASS END=206592704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 206592705 . T . PASS END=206592709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1119:0,93,255:31,0 chr2 206592710 . G . PASS END=206592710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 206592711 . C . PASS END=206592720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 206592721 . G . PASS END=206592721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:30,0 chr2 206592722 . C . PASS END=206592732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1180:0,83,255:33,0 chr2 206592733 . A . PASS END=206592741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1200:0,83,255:28,0 chr2 206592742 . T . PASS END=206592753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:26:0,60,900:0,71,255:25,0 chr2 206592754 . A . PASS END=206592754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 206592755 . T . PASS END=206592765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 206592766 . A . PASS END=206592770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 206605243 . G . PASS END=206605243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 206605244 . T . PASS END=206605387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:89:32:0,89,1196:0,89,255:40,0 chr2 206607927 . A . PASS END=206607934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 206607935 . T . PASS END=206607935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr2 206607936 . G . PASS END=206607945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,870:0,72,255:26,0 chr2 206607946 . G . PASS END=206607947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 206607948 . T . PASS END=206607948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 206607949 . G . PASS END=206607952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 206607953 . A . PASS END=206607953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 206607954 . T . PASS END=206607955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 206607956 . C . PASS END=206607956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,911:0,57,255:27,0 chr2 206607957 . T . PASS END=206607957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 206607958 . C . PASS END=206607958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:29,0 chr2 206607959 . T . PASS END=206608001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1133:0,93,255:35,0 chr2 206608002 . A . PASS END=206608038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:29:0,81,1102:0,83,255:33,0 chr2 206608039 . T C, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,18,0:0,12,0:87:175,90,0,1154,90,1154:255,90,0:0,0:1.3729e+02,8.7289e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,15:0,0,21,9 chr2 206608040 . A . PASS END=206608052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1088:0,87,255:30,0 chr2 206608053 . G . PASS END=206608054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1070:0,62,255:26,0 chr2 206608055 . T . PASS END=206608057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206608058 . T . PASS END=206608061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,83,255:26,0 chr2 206608062 . C . PASS END=206608063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206608064 . C . PASS END=206608068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:26,0 chr2 206608069 . C . PASS END=206608069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:56:30:0,56,850:0,56,255:24,0 chr2 206608070 . C . PASS END=206608071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:29,0 chr2 206608072 . T . PASS END=206608072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1023:0,63,255:28,0 chr2 206608073 . C . PASS END=206608073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 206608074 . A . PASS END=206608074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 206608075 . G . PASS END=206608075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:27:33:0,27,1000:0,27,255:26,0 chr2 206608076 . G . PASS END=206608076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr2 206608077 . C . PASS END=206608080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:28,0 chr2 206608081 . G . PASS END=206608081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1102:0,66,255:28,0 chr2 206608082 . C . PASS END=206608084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:30,0 chr2 206608085 . G . PASS END=206608085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:29,0 chr2 206608086 . G . PASS END=206608086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 206608087 . T . PASS END=206608087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:29,0 chr2 206608088 . G . PASS END=206608088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 206608089 . A . PASS END=206608089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 206608090 . G . PASS END=206608091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 206608092 . A . PASS END=206608092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:28,0 chr2 206608093 . G . PASS END=206608096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:30,0 chr2 206608097 . C . PASS END=206608097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:29,0 chr2 206608098 . T . PASS END=206608104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1178:0,86,255:31,0 chr2 206608105 . A . PASS END=206608105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1100:0,44,255:28,0 chr2 206608106 . G . PASS END=206608248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1191:0,81,255:38,0 chr2 206608249 . T . PASS END=206608249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:29,0 chr2 206608250 . C . PASS END=206608254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:30,0 chr2 206608255 . C . PASS END=206608260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 206608261 . G . PASS END=206608263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 206608264 . C . PASS END=206608264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 206608265 . C . PASS END=206608265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 206608266 . A . PASS END=206608266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 206608267 . G . PASS END=206608281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:28,0 chr2 206608282 . C . PASS END=206608295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr2 206608296 . C . PASS END=206608303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,64,255:18,0 chr2 206610470 . C . PASS END=206610614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:82:35:0,82,1341:0,82,255:40,0 chr2 206614449 . A . PASS END=206614462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,560:0,45,255:19,0 chr2 206614463 . G . PASS END=206614470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr2 206614471 . G . PASS END=206614473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 206614474 . G . PASS END=206614491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr2 206614492 . C . PASS END=206614492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 206614493 . G . PASS END=206614521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,870:0,61,255:26,0 chr2 206614522 . A . PASS END=206614523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,829:0,45,255:23,0 chr2 206614524 . A . PASS END=206614524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:23,0 chr2 206614525 . G . PASS END=206614525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:21,0 chr2 206614526 . G . PASS END=206614527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,922:0,62,255:22,0 chr2 206614528 . G . PASS END=206614528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,900:0,47,255:22,0 chr2 206614529 . G . PASS END=206614533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:24,0 chr2 206614534 . A . PASS END=206614535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,828:0,42,255:21,0 chr2 206614536 . A . PASS END=206614536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 206614537 . G . PASS END=206614551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:41:17:0,41,659:0,41,255:19,0 chr2 206614552 . C . PASS END=206614552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 206614553 . A . PASS END=206614555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr2 206614556 . T . PASS END=206614556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:15,0 chr2 206614557 . T . PASS END=206614558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 206614559 . G . PASS END=206614559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 206614560 . A . PASS END=206614565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,515:0,48,255:16,0 chr2 206617559 . A . PASS END=206617567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr2 206617568 . T . PASS END=206617583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,743:0,60,255:24,0 chr2 206617584 . A . PASS END=206617584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 206617585 . T . PASS END=206617587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,917:0,75,255:25,0 chr2 206617588 . A . PASS END=206617588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 206617589 . A . PASS END=206617595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 206617596 . C . PASS END=206617596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 206617597 . T . PASS END=206617603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,892:0,72,255:24,0 chr2 206617604 . T . PASS END=206617604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 206617605 . C . PASS END=206617645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,758:0,62,255:24,0 chr2 206617646 . G . PASS END=206617699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr2 206628398 . A . PASS END=206628409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,441:0,36,255:13,0 chr2 206628410 . T . PASS END=206628410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 206628411 . C . PASS END=206628416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 206628417 . G . PASS END=206628458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,529:0,42,255:19,0 chr2 206628459 . C . PASS END=206628463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 206628464 . G . PASS END=206628469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr2 206628470 . C . PASS END=206628505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,861:0,66,255:26,0 chr2 206628506 . T . PASS END=206628513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 206628514 . C . PASS END=206628535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,978:0,67,255:26,0 chr2 206628536 . T . PASS END=206628536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 206628537 . G . PASS END=206628595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,731:0,60,255:25,0 chr2 206628596 . A . PASS END=206628633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 206628634 . C . PASS END=206628655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 206628656 . A . PASS END=206628660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 206630198 . A . PASS END=206630294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:49:0,114,1710:0,123,255:40,0 chr2 206631507 . A . PASS END=206631542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:84:0,120,1800:0,219,255:40,0 chr2 206638267 . T . PASS END=206638270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 206640970 . G . PASS END=206640971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 206640972 . G . PASS END=206640972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 206640973 . G . PASS END=206640973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 206640974 . C . PASS END=206641004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:13,0 chr2 206641005 . G . PASS END=206641006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:13:0,25,405:0,25,255:10,0 chr2 206641007 . C . PASS END=206641015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 206641016 . C . PASS END=206641016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 206641017 . A . PASS END=206641024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 206641025 . C . PASS END=206641025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 206641026 . A . PASS END=206641031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 206641032 . G . PASS END=206641044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,496:0,42,255:18,0 chr2 206641045 . A . PASS END=206641046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 206641047 . G . PASS END=206641047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 206641048 . T . PASS END=206641050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 206641051 . T . PASS END=206641051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 206641052 . G . PASS END=206641077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 206641078 . T . PASS END=206641078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 206641079 . G . PASS END=206641080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 206641081 . T . PASS END=206641081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 206641082 . C . PASS END=206641095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 206641096 . C . PASS END=206641096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 206641097 . C . PASS END=206641117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 206641118 . G . PASS END=206641118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 206641119 . T . PASS END=206641125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,853:0,69,255:24,0 chr2 206641126 . A . PASS END=206641127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:24,0 chr2 206641128 . G . PASS END=206641128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 206641129 . C . PASS END=206641129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 206641130 . G . PASS END=206641143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,902:0,75,255:25,0 chr2 206641144 . A . PASS END=206641144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 206641145 . T . PASS END=206641145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 206641146 . C . PASS END=206641146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 206641147 . A . PASS END=206641151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 206641152 . A . PASS END=206641152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 206641153 . T . PASS END=206641154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 206641155 . A . PASS END=206641155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,784:0,33,255:20,0 chr2 206641156 . C . PASS END=206641156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 206641157 . C . PASS END=206641157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 206641158 . T . PASS END=206641164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 206641165 . C . PASS END=206641165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,682:0,46,255:20,0 chr2 206641166 . C . PASS END=206641171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 206641172 . C . PASS END=206641172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 206641173 . T . PASS END=206641173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 206641174 . A . PASS END=206641186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,46,255:19,0 chr2 206641187 . C . PASS END=206641188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,585:0,32,255:13,0 chr2 206641189 . C . PASS END=206641189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:14,0 chr2 206641190 . T . PASS END=206641190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:7:21:0,7,487:0,7,255:14,0 chr2 206641191 . C . PASS END=206641207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 206641208 . C . PASS END=206641208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:13,0 chr2 206641209 . C . PASS END=206641221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:14,0 chr2 206641222 . T . PASS END=206641233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 206641234 . G . PASS END=206641242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 206641243 . A . PASS END=206641245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:18:9:0,18,270:0,27,255:6,0 chr2 206641246 . G . PASS END=206641250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 206650104 . C . PASS END=206650221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1125:0,80,255:40,0 chr2 206652300 . C G, 48.97 PASS DP=19;MQ=250.00;MQRankSum=3.592;ReadPosRankSum=1.775;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,8,0:0.421,0.000:19:6,4,0:5,4,0:48:84,0,50,278,392,670:245,0,255:9,0:4.8966e+01,7.6882e-05,5.3000e+01,2.7803e+02,4.2689e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,5,3:3,8,3,5 chr2 206656959 . T . PASS END=206657009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,5:83:99:74:0,112,1800:0,112,255:40,0 chr2 206659478 . A . PASS END=206659485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,925:0,78,255:26,0 chr2 206659486 . G . PASS END=206659486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 206659487 . A . PASS END=206659487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:26,0 chr2 206659488 . G . PASS END=206659488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 206659489 . G . PASS END=206659489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:26,0 chr2 206659490 . T . PASS END=206659490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 206659491 . G . PASS END=206659492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 206659493 . A . PASS END=206659503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,945:0,65,255:25,0 chr2 206659504 . T . PASS END=206659515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,978:0,81,255:29,0 chr2 206659516 . A . PASS END=206659516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 206659517 . C . PASS END=206659530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1155:0,80,255:33,0 chr2 206659531 . G . PASS END=206659531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 206659532 . C . PASS END=206659572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,86,255:34,0 chr2 206659573 . G . PASS END=206659573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1139:0,66,255:26,0 chr2 206659574 . A . PASS END=206659594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr2 206659595 . T . PASS END=206659595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:27,0 chr2 206659596 . C . PASS END=206659615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 206659616 . T . PASS END=206659633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:26:0,65,969:0,65,255:26,0 chr2 206659634 . G . PASS END=206659646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 206659647 . G . PASS END=206659710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,937:0,62,255:26,0 chr2 206659711 . A . PASS END=206659711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 206659712 . A . PASS END=206659718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 206659719 . G . PASS END=206659719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 206659720 . C . PASS END=206659740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,838:0,61,255:24,0 chr2 206659741 . A . PASS END=206659741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 206659742 . A . PASS END=206659747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 206659748 . A . PASS END=206659748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:20,0 chr2 206659749 . G . PASS END=206659749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 206659750 . A . PASS END=206659750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 206659751 . T . PASS END=206659753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,782:0,30,255:21,0 chr2 206659754 . A . PASS END=206659758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 206659759 . C . PASS END=206659778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,630:0,41,255:19,0 chr2 206659779 . A . PASS END=206659779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,550:0,12,255:14,0 chr2 206659780 . T . PASS END=206659780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 206659781 . G . PASS END=206659782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,491:0,34,255:13,0 chr2 206869092 . T . PASS END=206869093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:32:0,80,1117:0,80,255:31,0 chr2 206869094 . A . PASS END=206869094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1156:0,72,255:30,0 chr2 206869095 . G . PASS END=206869310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:87:35:0,87,1082:0,87,255:40,0 chr2 206869311 . G . PASS END=206869311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1535:0,77,255:40,0 chr2 206869312 . C . PASS END=206869331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:41:0,85,1482:0,85,255:40,0 chr2 206869332 . T . PASS END=206869332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1364:0,68,255:37,0 chr2 206869333 . A . PASS END=206869439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:81:30:0,81,1058:0,84,255:40,0 chr2 206869440 . A . PASS END=206869441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:26,0 chr2 206869442 . G . PASS END=206869452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 206869453 . C . PASS END=206869453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 206869454 . C . PASS END=206869479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,973:0,83,255:32,0 chr2 206869480 . T . PASS END=206869480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,953:0,79,255:26,0 chr2 206869481 . C . PASS END=206869494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1208:0,83,255:29,0 chr2 206869495 . G . PASS END=206869497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 206869498 . A . PASS END=206869500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206869501 . T . PASS END=206869502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 206869503 . G . PASS END=206869504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 206869505 . C . PASS END=206869505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:25,0 chr2 206869506 . C . PASS END=206869509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206869510 . T . PASS END=206869512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1047:0,71,255:25,0 chr2 206869513 . G . PASS END=206869528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:29,0 chr2 206869529 . C . PASS END=206869560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,864:0,61,255:26,0 chr2 206869561 . A . PASS END=206869642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:28:0,80,1126:0,80,255:40,0 chr2 206869643 . A . PASS END=206869643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1336:0,71,255:37,0 chr2 206869644 . G . PASS END=206869703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1305:0,95,255:40,0 chr2 206869704 . T . PASS END=206869704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1213:0,69,255:29,0 chr2 206869705 . G . PASS END=206869728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1125:0,80,255:32,0 chr2 206869729 . T . PASS END=206869729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1072:0,52,255:29,0 chr2 206869730 . A . PASS END=206869734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr2 206869735 . T . PASS END=206869735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:49:32:0,49,1078:0,49,255:28,0 chr2 206869736 . G . PASS END=206869744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1185:0,80,255:30,0 chr2 206869745 . T . PASS END=206869745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1029:0,74,255:27,0 chr2 206869746 . G . PASS END=206869747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 206869748 . T . PASS END=206869748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 206869749 . T . PASS END=206869749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:27,0 chr2 206869750 . A . PASS END=206869772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:26,0 chr2 206869773 . C . PASS END=206869777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:15,0 chr2 206869778 . C . PASS END=206869778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:15,0 chr2 206869779 . A . PASS END=206869785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:32:16:0,32,549:0,32,255:13,0 chr2 206869786 . G . PASS END=206869788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 206869789 . C . PASS END=206869789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 206869790 . T . PASS END=206869790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 206869791 . C . PASS END=206869792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 206869793 . G . PASS END=206869793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:11,0 chr2 206869794 . G . PASS END=206869802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 206869803 . G . PASS END=206869816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr2 206869817 . G . PASS END=206869818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 206869819 . C . PASS END=206869873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr2 206869874 . T . PASS END=206869878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 206869879 . G . PASS END=206869879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 206869880 . A . PASS END=206869893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,784:0,66,255:24,0 chr2 206869894 . T . PASS END=206869894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 206869895 . T . PASS END=206869898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,892:0,72,255:25,0 chr2 206869899 . T . PASS END=206869899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 206869900 . G . PASS END=206869900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 206869901 . G . PASS END=206869906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1063:0,84,255:28,0 chr2 206869907 . A . PASS END=206869912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,919:0,70,255:26,0 chr2 206869913 . G . PASS END=206870051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1019:0,83,255:40,0 chr2 206870052 . C . PASS END=206870052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1410:0,68,255:37,0 chr2 206870053 . T . PASS END=206870114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:36:0,91,1357:0,91,255:40,0 chr2 206870115 . A . PASS END=206870115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1263:0,78,255:34,0 chr2 206870116 . T . PASS END=206870183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1217:0,89,255:39,0 chr2 206870184 . A . PASS END=206870185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:60:33:0,60,1147:0,60,255:29,0 chr2 206870186 . A . PASS END=206870200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:30:0,81,1215:0,88,255:30,0 chr2 206870201 . A . PASS END=206870201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 206870202 . G . PASS END=206870212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1074:0,90,255:30,0 chr2 206870213 . G . PASS END=206870213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 206870214 . C . PASS END=206870220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 206870221 . G . PASS END=206870240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr2 206870241 . G . PASS END=206870257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:18:0,44,690:0,44,255:19,0 chr2 206872008 . C . PASS END=206872023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,848:0,61,255:26,0 chr2 206872024 . A . PASS END=206872026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:30,0 chr2 206872027 . T . PASS END=206872030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 206872031 . A . PASS END=206872031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 206872032 . A . PASS END=206872032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 206872033 . G . PASS END=206872038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 206872039 . A . PASS END=206872039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 206872040 . G . PASS END=206872148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1213:0,91,255:40,0 chr2 206872149 . C . PASS END=206872165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:25:0,75,969:0,75,255:26,0 chr2 206874301 . C . PASS END=206874301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 206874302 . G . PASS END=206874338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1213:0,84,255:40,0 chr2 206874339 . G A, 37.07 PASS DP=42;MQ=250.00;MQRankSum=5.115;ReadPosRankSum=3.374;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,13,0:0.310,0.000:42:18,7,0:11,6,0:37:72,0,50,449,1037,1486:255,0,255:29,0:3.7067e+01,8.7503e-04,5.3001e+01,4.4853e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,11,6,7:19,10,4,9 chr2 206874340 . G . PASS END=206874376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,120,1800:0,132,255:40,0 chr2 206874377 . T . PASS END=206874508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:29:0,84,1100:0,87,255:40,0 chr2 206874509 . A . PASS END=206874510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 206874511 . A . PASS END=206874511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:23,0 chr2 206874512 . A . PASS END=206874518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,70,255:25,0 chr2 206882404 . C . PASS END=206882410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,971:0,84,255:28,0 chr2 206882411 . T . PASS END=206882411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr2 206882412 . T . PASS END=206882522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:28:0,84,1070:0,84,255:40,0 chr2 206882523 . G . PASS END=206882523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1217:0,61,255:27,0 chr2 206882524 . G . PASS END=206882532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:31,0 chr2 206882533 . G . PASS END=206882533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:28,0 chr2 206882534 . A . PASS END=206882535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:28,0 chr2 206882536 . A . PASS END=206882536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1039:0,63,255:27,0 chr2 206882537 . T . PASS END=206882537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 206884460 . G . PASS END=206884558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:31:0,84,1103:0,89,255:40,0 chr2 206884559 . T . PASS END=206884569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:75:30:0,75,1125:0,90,255:26,0 chr2 206892835 . C . PASS END=206892843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 206892844 . C . PASS END=206892844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 206892845 . T . PASS END=206893036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:28:0,80,1070:0,80,255:40,0 chr2 206893037 . T . PASS END=206893037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:63:37:0,63,1122:0,63,255:26,0 chr2 206893038 . C . PASS END=206893041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 206893042 . G . PASS END=206893059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:27:0,60,900:0,65,255:25,0 chr2 206911228 . G A, 44.40 PASS DP=38;MQ=248.55;MQRankSum=3.616;ReadPosRankSum=0.469;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,14,0:0.368,0.000:38:16,12,0:8,2,0:44:79,0,50,489,813,1302:255,0,255:23,0:4.4402e+01,1.7939e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,9,9,5:11,13,9,5 chr2 206911229 . C . PASS END=206911239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1311:0,95,255:38,0 chr2 206911240 . T . PASS END=206911240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1243:0,67,255:36,0 chr2 206911241 . A . PASS END=206911265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:40:0,87,1283:0,87,255:40,0 chr2 206911266 . T . PASS END=206911335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,87,255:40,0 chr2 206911336 . C . PASS END=206911336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 206920922 . C . PASS END=206920931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,599:0,54,255:19,0 chr2 206920932 . A . PASS END=206920935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,800:0,63,255:22,0 chr2 206920936 . A . PASS END=206920936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,735:0,50,255:21,0 chr2 206920937 . G . PASS END=206920939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:23,0 chr2 206920940 . C . PASS END=206920940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 206920941 . A . PASS END=206920953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,869:0,62,255:26,0 chr2 206920954 . T . PASS END=206920965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 206920966 . C . PASS END=206920967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:26,0 chr2 206920968 . C . PASS END=206921297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,84,255:40,0 chr2 206921298 . G . PASS END=206921298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 206921299 . G . PASS END=206921307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 206921308 . T . PASS END=206921308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:26,0 chr2 206921309 . G . PASS END=206921317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 206921318 . G . PASS END=206921322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 206921323 . T . PASS END=206921350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1186:0,83,255:31,0 chr2 206921351 . G . PASS END=206921351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:30,0 chr2 206921352 . C . PASS END=206921413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1156:0,83,255:36,0 chr2 206921414 . C . PASS END=206921450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1279:0,89,255:35,0 chr2 206921451 . G A, 149.33 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,16,0:0,18,0:99:187,102,0,1308,102,1308:255,102,0:0,0:1.4933e+02,9.9327e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,21:0,0,17,17 chr2 206921452 . G . PASS END=206921482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1280:0,99,255:35,0 chr2 206921483 . C . PASS END=206921484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 206921485 . G . PASS END=206921488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 206921489 . G . PASS END=206921495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:28,0 chr2 206921496 . G . PASS END=206921497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 206921498 . A . PASS END=206921521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:32,0 chr2 206921522 . T . PASS END=206921522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1040:0,79,255:31,0 chr2 206921523 . C . PASS END=206921603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1249:0,86,255:39,0 chr2 206921604 . A . PASS END=206921604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1202:0,58,255:32,0 chr2 206921605 . T . PASS END=206921616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr2 206921617 . C . PASS END=206921617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:33,0 chr2 206921618 . T . PASS END=206921644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1189:0,102,255:34,0 chr2 206921645 . C . PASS END=206921650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,83,255:26,0 chr2 206921651 . A . PASS END=206921656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 206921657 . T . PASS END=206921667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:28:0,63,945:0,68,255:25,0 chr2 206927523 . C . PASS END=206927529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 206927530 . C . PASS END=206927532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 206927533 . C . PASS END=206927534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 206927535 . G . PASS END=206927535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 206927536 . A . PASS END=206927541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,654:0,46,255:19,0 chr2 206927542 . G . PASS END=206927552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:25,0 chr2 206927553 . G . PASS END=206927577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,851:0,81,255:28,0 chr2 206927578 . C . PASS END=206927582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 206927583 . T . PASS END=206927588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 206927589 . C . PASS END=206927591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,967:0,65,255:26,0 chr2 206927592 . T . PASS END=206927600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 206927601 . G . PASS END=206927601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 206927602 . G . PASS END=206927638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1172:0,86,255:32,0 chr2 206927639 . G . PASS END=206927639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 206927640 . G . PASS END=206927642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 206927643 . T . PASS END=206927643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 206927644 . A . PASS END=206927645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 206927646 . C . PASS END=206927662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:27:0,66,990:0,68,255:26,0 chr2 206927663 . C . PASS END=206927663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:23,0 chr2 206927664 . T . PASS END=206927683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr2 206927684 . T . PASS END=206927684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:23,0 chr2 206927685 . G . PASS END=206927688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 206927689 . A . PASS END=206927689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 206927690 . C . PASS END=206927690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 206927691 . A . PASS END=206927691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:21,0 chr2 206927692 . A . PASS END=206927703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,884:0,62,255:24,0 chr2 206927704 . C . PASS END=206927704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:23,0 chr2 206927705 . A . PASS END=206927705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 206927706 . A . PASS END=206927706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr2 206927707 . C . PASS END=206927712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 206927713 . A . PASS END=206927713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 206927714 . G . PASS END=206927740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,931:0,64,255:26,0 chr2 206927875 . C . PASS END=206927968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,102,1541:0,102,255:40,0 chr2 206950043 . C . PASS END=206950044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 206950045 . G . PASS END=206950045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 206950046 . A . PASS END=206950046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 206950047 . A . PASS END=206950047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr2 206950048 . T . PASS END=206950052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,227:6,0 chr2 206950053 . G . PASS END=206950053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,172:0,4,172:5,0 chr2 206950054 . G . PASS END=206950058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 206950059 . T . LowGQ END=206950059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:5,0 chr2 206950060 . C . PASS END=206950061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,205:6,0 chr2 206950062 . G . PASS END=206950066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 206950067 . A . PASS END=206950097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:6:0,15,210:0,18,202:6,0 chr2 206987832 . T . PASS END=206987832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 206987943 . T . PASS END=206987943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,99,1485:0,144,255:33,0 chr2 206987971 . G . PASS END=206987971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 206988043 . T . PASS END=206988043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:54:40:0,54,810:0,120,255:18,0 chr2 206988045 . C . PASS END=206988045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:51:39:0,51,765:0,101,255:17,0 chr2 206988062 . TAA TA,T,TAAA, 50.00 PASS DP=39;MQ=249.00;MQRankSum=4.056;ReadPosRankSum=-1.352;FractionInformativeReads=0.974;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,19,2,6,0:0.500,0.053,0.158,0.000:38:6,7,0,1,0:5,12,2,5,0:31:62,0,47,150,153,197,127,19,260,78,360,360,360,360,360:255,0,255:10,38:5.0004e+01,3.6691e-03,4.9514e+01,1.5011e+02,1.6457e+02,2.0011e+02,1.2699e+02,3.0845e+01,2.7186e+02,8.0845e+01,3.8263e+02,3.9463e+02,3.9463e+02,3.9463e+02,3.8564e+02:0.00,12.00,15.01,12.00,24.00,15.01,12.00,24.00,24.00,15.01,34.77,46.77,46.77,46.77,37.78:7,4,14,13:8,3,13,14 chr2 206988153 . T . PASS END=206988153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,127,255:40,0 chr2 206988268 . T . PASS END=206988268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,102,1530:0,123,255:34,0 chr2 206988348 . A . PASS END=206988348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 206988405 . C . PASS END=206988405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 206988450 . T . PASS END=206988450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 206988471 . G . PASS END=206988471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 206988483 . A . PASS END=206988483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 206988568 . T . PASS END=206988568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 206988758 . A . PASS END=206988758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 206988779 . T . PASS END=206988779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 206988815 . A . PASS END=206988815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,4:66:65:66:0,65,2150:0,65,255:40,5 chr2 206988882 . G . PASS END=206988882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 206988909 . T . PASS END=206988994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:31:0,80,1141:0,80,255:40,0 chr2 206988995 . T . PASS END=206989000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:29:0,69,1035:0,70,255:25,0 chr2 206991263 . C . PASS END=206991335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:56:0,120,1800:0,161,255:40,0 chr2 206991434 . C . PASS END=206991568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:32:0,81,1215:0,92,255:40,0 chr2 206992521 . C . PASS END=206992530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,637:0,41,255:18,0 chr2 206992531 . G . PASS END=206992531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 206992532 . C . PASS END=206992534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 206992535 . T . PASS END=206992535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr2 206992536 . T . PASS END=206992537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 206992538 . T . PASS END=206992538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 206992539 . A . PASS END=206992540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,644:0,54,255:18,0 chr2 206992541 . T . PASS END=206992541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 206992542 . T . PASS END=206992547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,652:0,54,255:19,0 chr2 206992548 . G . PASS END=206992576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,764:0,66,255:25,0 chr2 206992577 . C . PASS END=206992578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 206992579 . G . PASS END=206992582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1000:0,68,255:26,0 chr2 206992583 . C . PASS END=206992584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 206992585 . T . PASS END=206992591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,969:0,65,255:26,0 chr2 206992592 . G . PASS END=206992594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 206992595 . G . PASS END=206992596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,1022:0,68,255:26,0 chr2 206992597 . G . PASS END=206992614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 206992615 . A . PASS END=206992615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 206992616 . C . PASS END=206992616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 206992617 . A . PASS END=206992617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:27,0 chr2 206992618 . T . PASS END=206992619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 206992620 . T . PASS END=206992620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 206992621 . G . PASS END=206992631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 206992632 . C . PASS END=206992632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 206992633 . T . PASS END=206992637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 206992638 . G . PASS END=206992638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:26,0 chr2 206992639 . T . PASS END=206992648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 206992649 . C . PASS END=206992649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 206992650 . T . PASS END=206992661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,966:0,84,255:28,0 chr2 206992662 . A . PASS END=206992662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,929:0,51,255:26,0 chr2 206992663 . T . PASS END=206992685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 206992686 . A . PASS END=206992686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 206992687 . C . PASS END=206992691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 206992692 . A . PASS END=206992696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr2 206994812 . C . PASS END=206994936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:34:0,99,1236:0,101,255:40,0 chr2 206994937 . A . PASS END=206994957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:24:0,63,930:0,72,255:26,0 chr2 206994958 . C . PASS END=206994958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,892:0,44,255:20,0 chr2 206994959 . T . PASS END=206994965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 206994966 . C . PASS END=206994967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 206997669 . C . PASS END=206997790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:93:36:0,93,1295:0,95,255:40,0 chr2 206997791 . G . PASS END=206997800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,95,255:30,0 chr2 206997801 . A . PASS END=206997818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,990:0,63,255:26,0 chr2 206997819 . T . PASS END=206997829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:36:26:0,36,540:0,64,255:13,0 chr2 206997831 . T . PASS END=206997831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:15,0 chr2 206997835 . T . LowGQ END=206997835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,337:98,0,255:15,4 chr2 207003209 . C . PASS END=207003211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:28,0 chr2 207003212 . G . PASS END=207003212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 207003213 . C . PASS END=207003224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1155:0,80,255:31,0 chr2 207003225 . C . PASS END=207003225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1172:0,68,255:32,0 chr2 207003226 . T . PASS END=207003233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1156:0,83,255:34,0 chr2 207003234 . G . PASS END=207003234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1186:0,72,255:32,0 chr2 207003235 . C . PASS END=207003304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:35:0,95,1325:0,95,255:40,0 chr2 207003305 . T . PASS END=207003305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1208:0,61,255:29,0 chr2 207003306 . A . PASS END=207003323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1170:0,92,255:32,0 chr2 207003324 . T . PASS END=207003324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 207003325 . C . PASS END=207003327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 207003328 . T . PASS END=207003328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 207003329 . A . PASS END=207003337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 207003338 . G . PASS END=207003338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 207006665 . C . PASS END=207006793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:90:38:0,90,1344:0,93,255:40,0 chr2 207007410 . C . PASS END=207007411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 207007412 . A . PASS END=207007419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,551:0,45,255:19,0 chr2 207007420 . C . PASS END=207007431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,767:0,60,255:26,0 chr2 207007432 . C . PASS END=207007555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:29:0,87,1066:0,87,255:40,0 chr2 207008742 . C . PASS END=207008762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:41:0,113,1566:0,113,255:40,0 chr2 207008763 . C A, 50.00 PASS DP=50;MQ=250.00;MQRankSum=6.010;ReadPosRankSum=1.261;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,28,0:0.560,0.000:50:10,17,0:12,11,0:48:85,0,49,969,775,1744:255,0,255:22,0:5.0000e+01,7.2481e-05,5.1744e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,9,11,17:9,13,12,16 chr2 207008764 . G . PASS END=207008800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:51:0,120,1800:0,137,255:40,0 chr2 207008801 . C . PASS END=207008856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:40:0,99,1485:0,110,255:40,0 chr2 207009616 . C . PASS END=207009750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:47:0,120,1800:0,125,255:40,0 chr2 207011626 . C . PASS END=207011626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 207011627 . C . PASS END=207011628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 207011629 . T . PASS END=207011632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 207011633 . T . PASS END=207011646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,992:0,65,255:26,0 chr2 207011647 . A . PASS END=207011810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:28:0,81,1215:0,84,255:40,0 chr2 207011811 . A . PASS END=207011811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1118:0,42,255:26,0 chr2 207011812 . C . PASS END=207011812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:38:0,90,1350:0,98,255:29,0 chr2 207012255 . C . PASS END=207012385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:96:32:0,96,1180:0,96,255:40,2 chr2 207012391 . G . PASS END=207012392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,183,255:40,0 chr2 207012477 . C . PASS END=207012482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,164,255:40,0 chr2 207012483 . A G, 49.97 PASS DP=61;MQ=250.00;MQRankSum=6.701;ReadPosRankSum=4.739;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,30,0:0.492,0.000:61:17,16,0:14,14,0:48:85,0,50,1033,1090,2123:255,0,255:30,0:4.9965e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,20,13,17:15,16,13,17 chr2 207012484 . T . PASS END=207012520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:58:0,120,1800:0,160,255:40,0 chr2 207012521 . A . PASS END=207012558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:56:0,120,1800:0,158,255:40,0 chr2 207013744 . C . PASS END=207013791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:72:0,120,1800:0,129,255:40,0 chr2 207013792 . A . PASS END=207013820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:63:0,120,1800:0,171,255:40,0 chr2 207013834 . G . LowGQ END=207013834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,7:53:0:53:0,0,1472:90,0,255:40,11 chr2 207014527 . T . PASS END=207014607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,152,255:40,0 chr2 207014608 . A . PASS END=207014619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:77:0,120,1800:0,124,255:40,0 chr2 207014620 . A . PASS END=207014620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,11:78:1:78:0,1,2168:0,1,255:40,0 chr2 207014621 . G . PASS END=207014623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,2:78:99:76:0,120,1800:0,132,255:40,0 chr2 207014624 . A . PASS END=207014624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,7:76:61:76:0,61,2216:0,61,255:40,0 chr2 207014625 . T . PASS END=207014639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,3:74:83:67:0,83,1800:0,83,255:40,0 chr2 207014640 . T . PASS END=207014640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,6:66:62:66:0,62,1896:0,62,255:37,0 chr2 207014641 . C . PASS END=207014645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,4:66:81:66:0,81,1215:0,95,255:38,0 chr2 207014646 . A . PASS END=207014647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,4:60:78:60:0,78,1170:0,113,255:25,0 chr2 207014648 . G . PASS END=207014648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:49:61:0,49,1714:0,49,255:22,0 chr2 207014649 . C . PASS END=207014649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:72:59:0,72,1080:0,105,255:21,2 chr2 207014657 . TAAAAAAAAA TAAAAAA,TAAAA,TAAAAAAAA,TAAAAA,T,TAAA, 73.13 PASS DP=42;MQ=248.42;MQRankSum=3.196;ReadPosRankSum=-0.779;FractionInformativeReads=0.738;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:5,8,7,4,3,2,2,0:0.258,0.226,0.129,0.097,0.065,0.065,0.000:31:3,6,1,1,3,0,0,0:2,2,6,3,0,2,2,0:10:79,39,36,26,0,50,207,35,10,60,30,25,64,23,69,244,78,182,175,124,128,94,32,156,63,96,324,82,424,424,424,424,424,424,424,424:255,0,255:3,34:7.3129e+01,3.6307e+01,3.6224e+01,2.3129e+01,5.1397e-01,5.0514e+01,2.0422e+02,3.5456e+01,1.0145e+01,6.0145e+01,2.7915e+01,2.5459e+01,6.4754e+01,2.3772e+01,6.9095e+01,2.4175e+02,7.8552e+01,1.8233e+02,1.7595e+02,1.2498e+02,1.2855e+02,9.1339e+01,3.2139e+01,1.5613e+02,6.3762e+01,9.6448e+01,3.2465e+02,8.2139e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,3.00,6.01,3.00,6.00,6.01,3.00,6.00,6.00,6.01,3.00,6.00,6.00,6.00,6.01,3.00,6.00,6.00,6.00,6.00,6.01,3.00,6.00,6.00,6.00,6.00,6.00,6.01,34.77,37.77,37.77,37.77,37.77,37.77,37.77,37.78:3,2,12,14:3,2,15,11 chr2 207017143 . T . PASS END=207017234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:36:0,92,1268:0,92,255:40,0 chr2 207018342 . C . PASS END=207018406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:46:0,120,1800:0,130,255:40,0 chr2 207023820 . A . PASS END=207023857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:32:0,90,1119:0,96,255:34,0 chr2 207024091 . T . PASS END=207024091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 207024098 . A . PASS END=207024098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr2 207024121 . C . PASS END=207024121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 207024124 . A . PASS END=207024124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 207024133 . G . PASS END=207024133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr2 207024135 . T . PASS END=207024136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 207024161 . C . PASS END=207024161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 207024209 . A . PASS END=207024209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,194:4,0 chr2 207024704 . A . PASS END=207024716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,848:0,61,255:26,0 chr2 207024717 . A . PASS END=207024743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,927:0,81,255:29,0 chr2 207024744 . T . PASS END=207024744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:27,0 chr2 207024745 . G . PASS END=207024758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1092:0,87,255:29,0 chr2 207024759 . T . PASS END=207024779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:26,0 chr2 207024780 . A . PASS END=207024781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 207024782 . G . PASS END=207024782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 207024783 . G . PASS END=207024783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 207025281 . G . PASS END=207025406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:95:37:0,95,1317:0,95,255:40,0 chr2 207025407 . T . PASS END=207025434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:35:0,93,1252:0,94,255:37,0 chr2 207025611 . G . PASS END=207025614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,113,1590:0,113,255:40,0 chr2 207026070 . C . PASS END=207026196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:40:0,90,1350:0,102,255:40,0 chr2 207026762 . G . PASS END=207026828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:103,0:103:99:83:0,120,1800:0,250,255:40,0 chr2 207027213 . A . PASS END=207027248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,961:0,75,255:26,0 chr2 207027249 . A . PASS END=207027269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1057:0,87,255:31,0 chr2 207027270 . A . PASS END=207027270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1084:0,77,255:30,0 chr2 207027271 . G . PASS END=207027289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1119:0,90,255:31,0 chr2 207027290 . G . PASS END=207027338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,898:0,62,255:25,0 chr2 207027453 . C . PASS END=207027458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1164:0,83,255:32,0 chr2 207027459 . T . PASS END=207027459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1041:0,52,255:30,0 chr2 207027460 . A . PASS END=207027588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1184:0,81,255:40,0 chr2 207027589 . T . PASS END=207027602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,930:0,62,255:26,0 chr2 207027603 . T . PASS END=207027603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:20,0 chr2 207027604 . C . PASS END=207027607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 207040904 . T . PASS END=207041015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:34:0,90,1183:0,102,255:40,0 chr2 207041016 . A . PASS END=207041052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:55:0,120,1800:0,136,255:40,0 chr2 207041053 . T C, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.338;ReadPosRankSum=4.623;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,36,0:0.621,0.000:58:14,18,0:8,18,0:46:85,0,44,1259,676,1935:255,0,255:22,0:5.0000e+01,1.2167e-04,4.7444e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,8,20,16:10,12,16,20 chr2 207041054 . T . PASS END=207041090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,164,255:40,0 chr2 207041091 . A . PASS END=207041403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:49:0,116,1800:0,116,255:40,0 chr2 207041404 . T . PASS END=207041440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:51:0,120,1800:0,137,255:40,0 chr2 207041441 . G A, 50.00 PASS DP=68;MQ=249.55;MQRankSum=7.056;ReadPosRankSum=2.820;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,37,0:0.544,0.000:68:18,17,0:13,20,0:48:85,0,49,1213,1064,2277:255,0,255:31,0:5.0000e+01,6.8339e-05,5.2431e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,17,15,22:15,16,21,16 chr2 207041442 . T . PASS END=207041478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:57:0,120,1800:0,123,255:40,1 chr2 207041479 . C . PASS END=207041591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:46:0,100,1676:0,100,255:40,2 chr2 207041592 . A . PASS END=207041592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1645:0,72,255:40,2 chr2 207041593 . A . PASS END=207041936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:31:0,83,1216:0,83,255:40,0 chr2 207041937 . A . PASS END=207041937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr2 207041938 . A . PASS END=207041944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 207041945 . A . PASS END=207041945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,968:0,76,255:29,0 chr2 207041946 . A . PASS END=207041947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 207041948 . T . PASS END=207041948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 207041949 . A . PASS END=207041963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1088:0,90,255:30,0 chr2 207041964 . T . PASS END=207041971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:24,0 chr2 207146574 . A . PASS END=207146633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,137,255:40,0 chr2 207156739 . C . PASS END=207156840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,145,255:40,0 chr2 207161970 . C . PASS END=207161995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:95:34:0,95,1213:0,95,255:40,0 chr2 207161996 . T . PASS END=207162032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:58:0,120,1800:0,141,255:40,0 chr2 207162033 . A G, 50.00 PASS DP=62;MQ=249.73;MQRankSum=6.630;ReadPosRankSum=2.698;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:25,37,0:0.597,0.000:62:11,14,0:14,23,0:47:85,0,47,1323,881,2204:255,0,255:23,0:5.0000e+01,8.9049e-05,4.9780e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,13,18,19:14,11,21,16 chr2 207162034 . G . PASS END=207162070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:50:0,114,1710:0,127,255:40,0 chr2 207162071 . C . PASS END=207162092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:86:34:0,86,1225:0,86,255:38,0 chr2 207162093 . A . PASS END=207162093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1094:0,47,255:31,0 chr2 207162094 . G . PASS END=207162097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr2 207169441 . T . PASS END=207169441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 207169442 . T . PASS END=207169456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:37,0 chr2 207169457 . A . PASS END=207169457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,4:38:25:38:0,25,983:0,25,255:33,0 chr2 207169458 . C . PASS END=207169693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:38:0,114,1390:0,114,255:40,0 chr2 207169694 . C . PASS END=207169730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,118,1800:0,118,255:40,0 chr2 207169731 . G A, 48.03 PASS DP=63;MQ=250.00;MQRankSum=6.669;ReadPosRankSum=3.545;FractionInformativeReads=0.984;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,26,0:0.419,0.000:62:21,17,0:15,9,0:47:83,0,50,906,1180,2086:255,0,255:33,0:4.8030e+01,9.0084e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:17,19,12,14:18,18,17,9 chr2 207169732 . A . PASS END=207169768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:60:0,120,1800:0,125,255:40,0 chr2 207169769 . A . PASS END=207172589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:83:32:0,83,1167:0,83,255:40,2 chr2 207172590 . C . PASS END=207172626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,133,255:40,0 chr2 207172627 . A G, 233.13 PASS DP=62;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,30,0:0,32,0:183:271,186,0,2357,186,2357:255,189,0:0,0:2.3313e+02,1.8313e+02,0.0000e+00,4.5000e+02,2.1790e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,35:0,0,31,31 chr2 207172628 . T . PASS END=207172664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:58:0,120,1800:0,174,255:40,0 chr2 207172665 . T . PASS END=207174278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:87:42:0,87,1476:0,87,255:40,0 chr2 207174279 . C . PASS END=207174315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:42:0,90,1523:0,90,255:40,0 chr2 207174316 . T C, 172.95 PASS DP=42;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,42,0:1.000,0.000:42:0,26,0:0,16,0:123:211,126,0,1597,126,1597:255,132,0:0,0:1.7295e+02,1.2295e+02,0.0000e+00,4.5000e+02,1.5772e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,24:0,0,22,20 chr2 207174317 . C . PASS END=207174353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,107,1504:0,107,255:40,0 chr2 207174354 . A . PASS END=207174390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:85:41:0,85,1488:0,85,255:40,0 chr2 207174391 . T . PASS END=207174392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1357:0,62,255:40,0 chr2 207174393 . C . PASS END=207174395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:80:42:0,80,1463:0,80,255:40,0 chr2 207174396 . C . PASS END=207174396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1429:0,74,255:36,0 chr2 207174397 . T . PASS END=207174424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:94:48:0,94,1612:0,94,255:40,0 chr2 207174425 . G . PASS END=207174425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1607:0,75,255:40,0 chr2 207174426 . A . PASS END=207174426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:47:49:0,47,1584:0,47,255:40,0 chr2 207174427 . T . PASS END=207174427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:14:49:0,14,1523:0,14,255:40,4 chr2 207174428 . A . LowGQ END=207174428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:0:49:0,0,1382:4,0,255:40,1 chr2 207174429 . A . PASS END=207174734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:90:38:0,90,1374:0,90,255:40,0 chr2 207174735 . T . PASS END=207174735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:35,0 chr2 207174736 . G . PASS END=207174788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:37:0,84,1296:0,84,255:40,0 chr2 207174789 . T . PASS END=207174789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1466:0,77,255:40,0 chr2 207174790 . G . PASS END=207174867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:37:0,81,1280:0,81,255:40,0 chr2 207174868 . G . PASS END=207174868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1380:0,65,255:36,2 chr2 207174869 . A . PASS END=207174869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:15:41:0,15,1304:0,15,255:35,2 chr2 207174870 . A . PASS END=207174874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1357:0,82,255:37,0 chr2 207174875 . A . PASS END=207174875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1324:0,70,255:34,0 chr2 207174876 . A . PASS END=207175433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:36:0,81,1215:0,92,255:40,0 chr2 207175434 . T . PASS END=207175434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:49:55:0,49,1847:0,49,255:40,0 chr2 207175435 . A . PASS END=207175759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:94:41:0,94,1263:0,94,255:40,0 chr2 207175760 . A . PASS END=207175760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1573:0,75,255:40,0 chr2 207175761 . G . PASS END=207176131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:96:38:0,96,1330:0,98,255:40,0 chr2 207176132 . C . PASS END=207176134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:72:38:0,72,1080:0,114,255:25,0 chr2 207176135 . G . PASS END=207176189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1155:0,80,255:34,0 chr2 207176190 . A . PASS END=207176190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:34,0 chr2 207176191 . T . PASS END=207176223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:98:36:0,98,1365:0,98,255:40,0 chr2 207176224 . A . PASS END=207176224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:79:45:0,79,1402:0,79,255:40,0 chr2 207176225 . G . PASS END=207176298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,102,1304:0,102,255:40,0 chr2 207176299 . A . PASS END=207176299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,4:41:57:41:0,57,1233:0,57,255:35,0 chr2 207176300 . G . PASS END=207176314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1088:0,84,255:37,0 chr2 207176315 . T . PASS END=207176315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1112:0,77,255:34,0 chr2 207176316 . A . PASS END=207176317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 207308591 . A . LowDepth;LowGQ END=207308660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:3,0 chr2 207308661 . G . PASS END=207308662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr2 207308663 . C . PASS END=207308665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 207308666 . C . PASS END=207308686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 207308687 . G . PASS END=207308703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,662:0,54,255:19,0 chr2 207308704 . G . PASS END=207308706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 207308707 . C . PASS END=207308707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 207308708 . C . PASS END=207308711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 207308712 . C . PASS END=207308718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 207308719 . C . PASS END=207308762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,731:0,60,255:23,0 chr2 207308763 . C . PASS END=207308763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 207308764 . C . PASS END=207308788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 207308789 . G . PASS END=207308804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 207310031 . C . PASS END=207310240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:88:38:0,88,1284:0,88,255:40,0 chr2 207310241 . A . PASS END=207310241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1311:0,75,255:32,0 chr2 207310242 . T . PASS END=207310248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:37:0,87,1305:0,95,255:33,0 chr2 207345956 . G . PASS END=207346032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:42:0,108,1620:0,124,255:40,0 chr2 207395609 . T . PASS END=207395672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:66:0,120,1800:0,139,255:40,1 chr2 207406776 . G . PASS END=207406783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1197:0,91,255:35,0 chr2 207406784 . G . PASS END=207406784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:33,0 chr2 207406785 . C . PASS END=207406858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:84:35:0,84,1263:0,84,255:40,0 chr2 207407977 . T . PASS END=207408040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,108,1528:0,110,255:40,0 chr2 207412153 . A . PASS END=207412225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:74:0,120,1800:0,167,255:40,0 chr2 207413005 . C . PASS END=207413078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:41:0,96,1462:0,96,255:40,0 chr2 207414819 . C . PASS END=207414884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,0:97:99:88:0,120,1800:0,234,255:40,0 chr2 207422151 . T . PASS END=207422222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:56:0,120,1800:0,155,255:40,0 chr2 207424679 . A . PASS END=207424680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,686:0,60,255:20,0 chr2 207424681 . T . PASS END=207424682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,636:0,43,255:19,0 chr2 207424683 . A . PASS END=207424692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,770:0,66,255:23,0 chr2 207424693 . G . PASS END=207424695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 207424696 . C . PASS END=207424699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 207424700 . A . PASS END=207424702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 207424703 . A . PASS END=207424703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr2 207424704 . G . PASS END=207424814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:30:0,81,1111:0,84,255:40,0 chr2 207424815 . A . PASS END=207424815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:28,0 chr2 207424816 . G . PASS END=207424816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1135:0,63,255:28,0 chr2 207424817 . C . PASS END=207424820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 207424821 . C . PASS END=207424821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1129:0,71,255:27,0 chr2 207424822 . T . PASS END=207424822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 207424823 . G . PASS END=207424831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:66:28:0,66,990:0,71,255:26,0 chr2 207424832 . C . PASS END=207424832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,941:0,45,255:21,0 chr2 207424833 . A . PASS END=207424837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:25:0,60,878:0,61,255:21,0 chr2 207424838 . A . PASS END=207424842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr2 207425852 . G . PASS END=207425936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:47:0,120,1800:0,134,255:40,0 chr2 207426927 . T . PASS END=207427017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:54:0,120,1800:0,146,255:40,1 chr2 207429744 . A . PASS END=207429792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,161,255:40,0 chr2 207431947 . G . PASS END=207432046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:42:0,96,1565:0,96,255:40,0 chr2 207435464 . C . PASS END=207435535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,133,255:40,0 chr2 207436451 . G . PASS END=207436538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:90:39:0,90,1380:0,90,255:40,0 chr2 207436539 . T . PASS END=207436539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1291:0,75,255:35,0 chr2 207436540 . T . PASS END=207436540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 207437839 . T . PASS END=207437919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:58:0,120,1800:0,142,255:40,0 chr2 207452049 . T . PASS END=207452099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:75:0,120,1800:0,180,255:40,0 chr2 207452815 . G . PASS END=207452878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:35:0,96,1440:0,105,255:40,0 chr2 207454133 . A . PASS END=207454238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,105,1490:0,110,255:40,0 chr2 207457341 . T . PASS END=207457413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:96:43:0,96,1527:0,96,255:40,0 chr2 207457414 . A . PASS END=207457414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,8:63:56:63:0,56,1655:0,56,255:40,0 chr2 207457415 . T . PASS END=207457460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:48:0,120,1800:0,140,255:40,0 chr2 207459461 . T . PASS END=207459467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:26,0 chr2 207459468 . C . PASS END=207459469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 207459470 . T . PASS END=207459484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,817:0,61,255:26,0 chr2 207459485 . T . PASS END=207459614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1072:0,86,255:40,0 chr2 207459615 . T . PASS END=207459615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:26,0 chr2 207459616 . G . PASS END=207459618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 207459619 . C . PASS END=207459625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:24,0 chr2 207459626 . T . PASS END=207459629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 207460775 . G . PASS END=207460886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:41:0,108,1717:0,108,255:40,0 chr2 207470514 . T . PASS END=207470533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 207470534 . C . PASS END=207470549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 207470550 . C . PASS END=207470557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 207470558 . A . PASS END=207470561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 207470562 . T . PASS END=207470562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 207470563 . G . PASS END=207470583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 207470584 . A . PASS END=207470604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,205:0,21,205:9,0 chr2 207474634 . G . PASS END=207474724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:98:45:0,98,1710:0,98,255:40,0 chr2 207482303 . A . PASS END=207482435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:83:36:0,83,1258:0,83,255:40,0 chr2 207482436 . T . PASS END=207482436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1009:0,66,255:31,0 chr2 207482437 . T . PASS END=207482442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:32,0 chr2 207508961 . A . PASS END=207509159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:36:0,80,1309:0,80,255:40,1 chr2 207509160 . A . PASS END=207509160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:36,0 chr2 207509161 . C . PASS END=207509367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:35:0,81,1215:0,96,255:40,0 chr2 207509368 . A . PASS END=207509372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:75:30:0,75,1125:0,86,255:25,0 chr2 207513385 . G . PASS END=207513501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:93:36:0,93,1297:0,95,255:40,0 chr2 207513502 . A . PASS END=207513502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1210:0,61,255:30,0 chr2 207513503 . A . PASS END=207513518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1091:0,82,255:32,0 chr2 207516542 . T . PASS END=207516622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:32:0,81,1215:0,90,255:40,0 chr2 207516623 . C . PASS END=207516645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 207527627 . C . PASS END=207527723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:98:39:0,98,1407:0,98,255:40,0 chr2 207527724 . T . PASS END=207527724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,3:50:78:50:0,78,1668:0,78,255:40,0 chr2 207527725 . G . PASS END=207527802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:42:0,110,1483:0,110,255:40,0 chr2 207527803 . C . PASS END=207527836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:38:0,108,1665:0,108,255:40,0 chr2 207527837 . T . PASS END=207527837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1289:0,75,255:36,0 chr2 207527838 . C . PASS END=207527839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 207527840 . G T, 50.00 PASS DP=38;MQ=250.00;MQRankSum=4.764;ReadPosRankSum=2.865;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,27,0:0.711,0.000:38:6,17,0:5,10,0:38:85,0,35,921,394,1314:255,0,255:10,0:5.0001e+01,7.0416e-04,3.8178e+01,4.5000e+02,4.2828e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,6,10,17:6,5,12,15 chr2 207527841 . T . PASS END=207527877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:37:0,90,1296:0,94,255:40,0 chr2 207527878 . T . PASS END=207528031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1195:0,86,255:37,0 chr2 207528032 . T . PASS END=207528033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,986:0,60,255:27,0 chr2 207528034 . G . PASS END=207528038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 207528039 . C . PASS END=207528039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:29,0 chr2 207528040 . T . PASS END=207528040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 207528041 . T . PASS END=207528041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 207528042 . T . PASS END=207528044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 207528045 . A . PASS END=207528045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr2 207528046 . G . PASS END=207528046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 207528047 . T . PASS END=207528095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,864:0,61,255:26,0 chr2 207528096 . A . PASS END=207528115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,60,255:19,0 chr2 207528116 . T . PASS END=207528119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 207530594 . C . PASS END=207530753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,1:99:99:54:0,120,1800:0,155,255:40,0 chr2 207557899 . C . PASS END=207557910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:23:0,61,847:0,61,255:26,0 chr2 207557911 . T . PASS END=207557926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:31,0 chr2 207557927 . T . PASS END=207557927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:29,0 chr2 207557928 . T . PASS END=207557937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1156:0,83,255:32,0 chr2 207557938 . T . PASS END=207557938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1078:0,63,255:28,0 chr2 207557939 . G . PASS END=207557955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1202:0,86,255:34,0 chr2 207557956 . C . PASS END=207557956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:33,0 chr2 207557957 . T . PASS END=207557965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1168:0,88,255:35,0 chr2 207557966 . C . PASS END=207557966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:33,0 chr2 207557967 . T . PASS END=207557985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1219:0,91,255:35,0 chr2 207557986 . C . PASS END=207557986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:29,0 chr2 207557987 . C . PASS END=207557989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1188:0,85,255:30,0 chr2 207557990 . G . PASS END=207557990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1166:0,63,255:28,0 chr2 207557991 . A . PASS END=207557991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 207557992 . A . PASS END=207557992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1194:0,71,255:28,0 chr2 207557993 . G . PASS END=207557993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 207557994 . A . PASS END=207558016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,931:0,64,255:26,0 chr2 207558017 . A . PASS END=207558017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,864:0,42,255:24,0 chr2 207558018 . G . PASS END=207558020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:25,0 chr2 207558021 . A . PASS END=207558021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,712:0,58,255:23,0 chr2 207558022 . A . PASS END=207558027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 207558028 . G . PASS END=207558028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr2 207558029 . T . PASS END=207558029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr2 207558030 . A . PASS END=207558031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 207558032 . T . PASS END=207558032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 207558033 . C . PASS END=207558034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 207558035 . G . PASS END=207558047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:46:20:0,46,706:0,46,255:19,0 chr2 207559490 . C . PASS END=207559596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:43:0,120,1800:0,129,255:40,0 chr2 207559597 . G . PASS END=207559601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,2:55:99:54:0,120,1800:0,132,255:40,0 chr2 207564451 . C . PASS END=207564572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:27:0,81,994:0,81,255:40,0 chr2 207564573 . C . PASS END=207564573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1160:0,66,255:32,0 chr2 207564574 . C . PASS END=207564594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1050:0,82,255:33,0 chr2 207564595 . T . PASS END=207564595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:27,0 chr2 207564596 . T . PASS END=207564599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:29,0 chr2 207564600 . T . PASS END=207564600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:27,0 chr2 207564601 . G . PASS END=207564604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,86,255:28,0 chr2 207564605 . G . PASS END=207564605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 207564606 . G . PASS END=207564608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 207564609 . C . PASS END=207564614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 207564869 . C . PASS END=207564940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:99:40:0,105,1413:0,106,255:40,0 chr2 207569567 . C . PASS END=207569667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:88:46:0,88,1800:0,88,255:40,0 chr2 207569692 . T . PASS END=207569756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:57:0,120,1800:0,143,255:40,0 chr2 207570512 . C . PASS END=207570597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,99,1237:0,100,255:40,0 chr2 207572026 . C . PASS END=207572207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1143:0,90,255:40,0 chr2 207572208 . G . PASS END=207572220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:25,0 chr2 207572221 . A . PASS END=207572227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:23:0,51,765:0,58,255:18,0 chr2 207575248 . A . PASS END=207575322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:47:0,120,1800:0,141,255:40,0 chr2 207582985 . C . PASS END=207583003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:84:0,120,1800:0,237,255:40,0 chr2 207603207 . T . PASS END=207603220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,151,255:40,0 chr2 207603221 . T C, 43.05 PASS DP=63;MQ=250.00;MQRankSum=6.342;ReadPosRankSum=0.938;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,20,0:0.317,0.000:63:21,11,0:22,9,0:42:78,0,47,178,178,178:255,0,255:40,0:4.3046e+01,2.5887e-04,5.0000e+01,1.7782e+02,2.1259e+02,1.8083e+02:0.00,34.77,37.78,34.77,69.54,37.78:31,12,15,5:15,28,12,8 chr2 207603222 . T . PASS END=207603233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,142,255:40,0 chr2 207603234 . T G, 39.68 PASS DP=64;MQ=250.00;MQRankSum=6.449;ReadPosRankSum=1.616;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,21,0:0.328,0.000:64:21,11,0:22,10,0:39:74,0,50,751,1531,2282:255,0,255:37,0:3.9682e+01,4.8901e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,27,10,11:22,21,14,7 chr2 207603235 . T . PASS END=207603235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 207604317 . C . PASS END=207604385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,3:56:99:50:0,101,1800:0,101,255:40,0 chr2 207605778 . C . PASS END=207605828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,0:94:99:86:0,120,1800:0,242,255:40,0 chr2 207610346 . C . PASS END=207610397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:86:0,120,1800:0,233,255:40,0 chr2 207611011 . C . PASS END=207611150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:58:0,108,1800:0,108,255:40,0 chr2 207613744 . C . PASS END=207613745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,981:0,90,255:30,0 chr2 207613746 . T . PASS END=207613746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 207613747 . C . PASS END=207613748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1119:0,90,255:31,0 chr2 207613749 . C . PASS END=207613749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 207613750 . T . PASS END=207613760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1202:0,96,255:35,0 chr2 207613761 . A . PASS END=207613761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:33,0 chr2 207613762 . A . PASS END=207613907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:86:35:0,86,1305:0,86,255:40,0 chr2 207615658 . C . PASS END=207615799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:81:36:0,81,1215:0,108,255:40,0 chr2 207619733 . A . PASS END=207619736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:26:0,67,919:0,67,255:27,0 chr2 207619737 . A . PASS END=207619741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 207619742 . C . PASS END=207619742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 207619743 . T . PASS END=207619752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,981:0,87,255:30,0 chr2 207619753 . T . PASS END=207619753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 207619754 . T . PASS END=207619757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 207619758 . G . PASS END=207619758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 207619759 . G . PASS END=207619778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:31:0,85,1103:0,85,255:36,0 chr2 207619779 . A G, 49.81 PASS DP=37;MQ=250.00;MQRankSum=5.102;ReadPosRankSum=2.028;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,17,0:0.472,0.000:36:10,5,0:9,12,0:48:85,0,50,608,635,1243:255,0,255:19,0:4.9806e+01,6.7045e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,5,10,7:7,12,8,9 chr2 207619780 . C . PASS END=207619816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:38:0,96,1329:0,100,255:40,0 chr2 207619817 . C . PASS END=207620022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:80:29:0,80,1094:0,80,255:40,0 chr2 207620023 . T . PASS END=207620023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 207620024 . G . PASS END=207620024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 207620025 . G . PASS END=207620035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:25,0 chr2 207620036 . C . PASS END=207620049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 207620050 . C . PASS END=207620050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 207620051 . A . PASS END=207620053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,90,255:28,0 chr2 207620054 . T . PASS END=207620055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1180:0,60,255:27,0 chr2 207620056 . G . PASS END=207620059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 207620060 . C . PASS END=207620061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,79,255:25,0 chr2 207620062 . C . PASS END=207620062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:28,0 chr2 207620063 . T . PASS END=207620077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr2 207620078 . A . PASS END=207620199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1094:0,84,255:40,0 chr2 207620200 . A . PASS END=207620200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1181:0,78,255:30,0 chr2 207620201 . T . PASS END=207620217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1186:0,83,255:32,0 chr2 207620218 . G . PASS END=207620218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 207620219 . G . PASS END=207620221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,85,255:28,0 chr2 207620222 . C . PASS END=207620222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:27,0 chr2 207620223 . A . PASS END=207620229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:28:0,84,1011:0,84,255:28,0 chr2 207621622 . C . PASS END=207621721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:83:33:0,83,1197:0,83,255:40,0 chr2 207621722 . T . PASS END=207621758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:40:0,96,1440:0,107,255:40,0 chr2 207621759 . A G, 166.47 PASS DP=41;MQ=250.00;FractionInformativeReads=0.976 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,16,0:0,24,0:116:204,119,0,1490,119,1490:255,123,0:0,0:1.6647e+02,1.1647e+02,0.0000e+00,4.5000e+02,1.5124e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,18:0,0,18,22 chr2 207621760 . T . PASS END=207621762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:39:0,96,1440:0,101,255:35,0 chr2 207621763 . A . PASS END=207621764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:37:0,75,1174:0,75,255:33,0 chr2 207621961 . C . PASS END=207622095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:50:0,117,1755:0,134,255:40,0 chr2 207625625 . C . PASS END=207625737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:64:0,114,1710:0,186,255:40,0 chr2 207629974 . C . PASS END=207629995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,631:0,40,255:19,0 chr2 207630251 . T . PASS END=207630251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,413:0,36,255:12,0 chr2 207630271 . T . PASS END=207630271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 207630302 . G . PASS END=207630302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 207630306 . T . PASS END=207630306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 207630332 . A . PASS END=207630332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 207630341 . G . PASS END=207630341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 207630392 . G . PASS END=207630392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 207631381 . C . PASS END=207631381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr2 207631388 . T . PASS END=207631388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 207631403 . A . PASS END=207631403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 207631418 . A . PASS END=207631423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:57:0,120,1800:0,171,255:40,0 chr2 207631424 . A . PASS END=207631460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:56:0,120,1800:0,157,255:40,0 chr2 207631461 . G A, 49.63 PASS DP=58;MQ=250.00;MQRankSum=6.516;ReadPosRankSum=3.819;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:31,27,0:0.466,0.000:58:16,13,0:15,14,0:48:84,0,50,965,1072,2037:255,0,255:31,0:4.9626e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,15,16,11:15,16,10,17 chr2 207631462 . C . PASS END=207631498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:57:0,120,1800:0,145,255:40,0 chr2 207631499 . C . PASS END=207632194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:81:30:0,81,1215:0,90,255:40,1 chr2 207634815 . G . PASS END=207634918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:50:0,120,1800:0,122,255:40,0 chr2 207635903 . C . PASS END=207635903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 207635906 . A . PASS END=207636014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,155,255:40,0 chr2 207636605 . G . PASS END=207636605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 207636618 . A . PASS END=207636741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:41:0,89,1440:0,89,255:40,0 chr2 207636905 . A . PASS END=207637044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:35:0,99,1312:0,105,255:40,0 chr2 207638949 . G . PASS END=207639121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:50:0,108,1620:0,118,255:40,0 chr2 207639133 . T . PASS END=207639133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 207651444 . C . PASS END=207651444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1001:0,73,255:29,0 chr2 207651457 . A . PASS END=207651589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:93:31:0,93,1130:0,93,255:40,0 chr2 207651590 . C . PASS END=207651590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1543:0,77,255:40,0 chr2 207651591 . A . PASS END=207651611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:84:39:0,84,1350:0,84,255:40,0 chr2 207651612 . T . PASS END=207651612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1312:0,62,255:31,0 chr2 207651613 . G . PASS END=207651617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,94,255:32,0 chr2 207651618 . C . PASS END=207651618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:60:42:0,60,1324:0,60,255:30,0 chr2 207651619 . A . PASS END=207651619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:23:42:0,23,1266:0,23,255:30,0 chr2 207651620 . T . PASS END=207651620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1398:0,71,255:32,0 chr2 207651621 . C . PASS END=207651621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,4:42:31:42:0,31,1259:0,31,255:30,0 chr2 207651622 . A . PASS END=207651622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,5:41:26:41:0,26,1164:0,26,255:29,0 chr2 207651623 . G . PASS END=207651623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1352:0,90,255:31,0 chr2 207652661 . A . PASS END=207652675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,686:0,60,255:25,0 chr2 207652676 . C . PASS END=207652676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 207652677 . T . PASS END=207652677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 207652678 . T . PASS END=207652874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:30:0,80,1133:0,80,255:40,0 chr2 207652875 . T . PASS END=207652879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:71:29:0,71,1007:0,71,255:26,0 chr2 207653543 . A . PASS END=207653627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:91:64:0,91,1800:0,91,255:40,0 chr2 207655296 . A . PASS END=207655410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:46:0,119,1667:0,119,255:40,0 chr2 207656407 . G . PASS END=207656526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:52:0,120,1800:0,126,255:40,0 chr2 207656584 . G . PASS END=207656584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 207656613 . A . PASS END=207656613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 207656630 . A . PASS END=207656630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,108,1620:0,135,255:36,0 chr2 207656783 . G . PASS END=207656783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 207656854 . T . PASS END=207656854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,117,1755:0,138,255:39,0 chr2 207656925 . T . PASS END=207656925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 207656977 . C . PASS END=207656977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 207657111 . G . PASS END=207657111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 207657150 . C . PASS END=207657150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 207657325 . C . PASS END=207657325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,144,255:40,0 chr2 207657339 . G . PASS END=207657339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,170,255:40,0 chr2 207657536 . T . PASS END=207657536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:58:0,120,1800:0,158,255:40,0 chr2 207657562 . C . PASS END=207657562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 207658044 . A . PASS END=207658044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,897:0,78,255:26,0 chr2 207658104 . C . PASS END=207658105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 207658147 . A . PASS END=207658147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 207658226 . A . PASS END=207658226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 207658242 . A . PASS END=207658242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 207658409 . T . PASS END=207658409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1366:0,111,255:37,0 chr2 207658507 . C . PASS END=207658507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,105,1575:0,123,255:35,0 chr2 207658531 . G . PASS END=207658531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1405:0,114,255:38,0 chr2 207658547 . G . PASS END=207658547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 207658611 . G . PASS END=207658611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 207658632 . G . PASS END=207658632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 207658633 . T . PASS END=207658633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1398:0,120,255:40,0 chr2 207658667 . G . PASS END=207658667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 207658824 . C . PASS END=207658824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:27:0,51,765:0,81,255:17,0 chr2 207658842 . G . PASS END=207658842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:48:32:0,48,720:0,96,255:16,0 chr2 207658847 . TAC T,TACAC, 50.32 PASS DP=41;MQ=250.00;MQRankSum=5.110;ReadPosRankSum=0.206;FractionInformativeReads=0.878;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:18,1,17,0:0.028,0.472,0.000:36:8,1,10,0:10,0,7,0:48:65,323,264,0,199,50,275,520,154,429:255,0,255:18,28:5.0315e+01,3.2287e+02,2.6657e+02,6.2127e-05,2.1357e+02,5.3000e+01,2.9505e+02,4.5000e+02,1.8871e+02,4.5000e+02:0.00,15.00,18.00,15.00,30.00,18.00,34.77,49.77,49.77,37.77:11,7,11,7:11,7,14,4 chr2 207658857 . C . PASS END=207658857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 207658872 . C . PASS END=207658872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 207658900 . C . PASS END=207658900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 207658954 . G . PASS END=207658954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,111,1665:0,144,255:37,0 chr2 207658957 . C . PASS END=207658957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:47:0,87,1305:0,141,255:29,0 chr2 207658989 . T . PASS END=207658989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 207659156 . G . PASS END=207659156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 207659402 . A . PASS END=207659402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,128,255:40,0 chr2 207659411 . C . PASS END=207659411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 207659463 . A . PASS END=207659463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 207659486 . T . PASS END=207659486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 207659520 . A . PASS END=207659520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 207659523 . A . PASS END=207659523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 207659638 . A . PASS END=207659638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 207659647 . T . PASS END=207659647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 207659661 . T . PASS END=207659661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 207659757 . G . PASS END=207659757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:38:0,60,900:0,114,255:20,0 chr2 207659764 . G . PASS END=207659764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 207659823 . C . PASS END=207659823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 207659844 . G . PASS END=207659844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,102,1530:0,120,255:34,0 chr2 207659881 . C . PASS END=207659881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:32,0 chr2 207659906 . G . PASS END=207659906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:22,0 chr2 207659955 . G . PASS END=207659955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 207659976 . G . PASS END=207659976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 207659979 . A . PASS END=207659979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,674:0,54,255:18,0 chr2 207659996 . C . PASS END=207659996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 207659998 . C . PASS END=207659998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 207660388 . C . PASS END=207660388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 207660422 . A . PASS END=207660422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr2 207660516 . G . PASS END=207660516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 207660668 . T . PASS END=207660668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 207660725 . G . PASS END=207660725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 207660727 . C . PASS END=207660727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 207660748 . A . PASS END=207660748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 207660763 . A . PASS END=207660763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 207660852 . C . PASS END=207660852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 207660886 . A . PASS END=207660886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 207804324 . A . PASS END=207804391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:56:0,120,1800:0,129,255:40,0 chr2 207814341 . A . PASS END=207814437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:35:0,81,1215:0,88,255:40,0 chr2 207820187 . A . PASS END=207820288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,118,1544:0,118,255:40,0 chr2 207823025 . A . PASS END=207823129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,135,255:40,0 chr2 207824355 . A . PASS END=207824465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:36:0,92,1302:0,92,255:40,0 chr2 207825576 . G . PASS END=207825666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,150,255:40,0 chr2 207827136 . G . PASS END=207827199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1033:0,80,255:35,0 chr2 207827200 . A . PASS END=207827200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:32,0 chr2 207827201 . G . PASS END=207827338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1350:0,98,255:40,0 chr2 207832987 . A . PASS END=207833071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,2:90:99:69:0,120,1800:0,136,255:40,1 chr2 207833898 . A . PASS END=207833903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,795:0,61,255:25,0 chr2 207833904 . C . PASS END=207833921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,980:0,84,255:34,0 chr2 207833922 . A . PASS END=207833922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:18:35:0,18,900:0,18,255:32,0 chr2 207833923 . T . PASS END=207833959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:35:0,101,1304:0,101,255:40,1 chr2 207833960 . T . PASS END=207833960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,4:49:61:49:0,61,1264:0,61,255:40,1 chr2 207833961 . T . PASS END=207834124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:29:0,81,1102:0,87,255:40,1 chr2 207834125 . C . PASS END=207834125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr2 207834126 . T . PASS END=207834132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 207834133 . G . PASS END=207834141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 207834142 . C . PASS END=207834142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:23,0 chr2 207834143 . T . PASS END=207834160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,953:0,65,255:24,0 chr2 207945937 . T . PASS END=207945988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:93:42:0,93,1576:0,93,255:40,0 chr2 207953182 . C . PASS END=207953305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:92:34:0,92,1243:0,92,255:40,0 chr2 207978838 . T . PASS END=207978914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,162,255:40,0 chr2 207988495 . T . PASS END=207988575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1131:0,81,255:37,0 chr2 207988576 . G . PASS END=207988577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 207988578 . A . PASS END=207988578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr2 207988579 . C . PASS END=207988597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 207988598 . A . PASS END=207988612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:29:0,66,990:0,71,255:26,0 chr2 207988613 . C T, 133.81 PASS DP=29;MQ=196.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,13,0:0,16,0:84:172,87,0,1064,87,1064:255,87,0:0,0:1.3381e+02,8.3809e+01,0.0000e+00,4.5000e+02,1.1858e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,17:0,0,14,15 chr2 207988614 . A . PASS END=207988633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 207988634 . G . PASS END=207988638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 207988639 . G . PASS END=207988644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:22,0 chr2 207988645 . T . PASS END=207988645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:18,0 chr2 207988646 . C . PASS END=207988650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:23:0,61,900:0,61,255:21,0 chr2 207988651 . C . PASS END=207988681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:22,0 chr2 207988682 . T . PASS END=207988682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:20,0 chr2 207988683 . G . PASS END=207988696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 207988697 . C . PASS END=207988698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 207988699 . C . PASS END=207988714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:22,0 chr2 207988715 . A . PASS END=207988715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr2 207988716 . G . PASS END=207988718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,829:0,66,255:22,0 chr2 207988719 . G . PASS END=207988719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 207988720 . C . PASS END=207988734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,831:0,69,255:23,0 chr2 207988735 . G . PASS END=207988735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 207988736 . T . PASS END=207988749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr2 207988750 . T . PASS END=207988751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:19,0 chr2 207988752 . C . PASS END=207988760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 207988761 . G . PASS END=207988761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 207988762 . C . PASS END=207988770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,756:0,69,255:23,0 chr2 207988771 . T . PASS END=207988771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,501:0,5,255:20,0 chr2 207988772 . T . PASS END=207988773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 207988774 . G . PASS END=207988774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 207988775 . T . PASS END=207988802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:25,0 chr2 207988803 . T . PASS END=207988804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,759:0,47,255:20,0 chr2 207988805 . A . PASS END=207988932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:26,0 chr2 207988933 . A . PASS END=207988933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,691:0,49,255:20,0 chr2 207988934 . G . PASS END=207988955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,695:0,63,255:25,0 chr2 207988956 . C . PASS END=207988956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:24,0 chr2 207988957 . T . PASS END=207988983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,907:0,67,255:26,0 chr2 207988984 . G . PASS END=207988984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,931:0,53,255:23,0 chr2 207988985 . G . PASS END=207988995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 207988996 . G . PASS END=207989009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 207989010 . A . PASS END=207989011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 207989012 . G . PASS END=207989019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:30,0 chr2 207989020 . C . PASS END=207989021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 207989022 . A . PASS END=207989050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1087:0,80,255:30,0 chr2 207989051 . A . PASS END=207989053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 207989054 . G . PASS END=207989062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:31,0 chr2 207989063 . C . PASS END=207989063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1080:0,62,255:29,0 chr2 207989064 . T . PASS END=207989069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 207989070 . A . PASS END=207989070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:29,0 chr2 207989071 . A . PASS END=207989073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 207989074 . T . PASS END=207989074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1020:0,79,255:29,0 chr2 207989075 . C . PASS END=207989077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 207989078 . T . PASS END=207989078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 207989079 . G . PASS END=207989087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 207989088 . C . PASS END=207989088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1049:0,62,255:26,0 chr2 207989089 . G . PASS END=207989093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 207989094 . T . PASS END=207989120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:24:0,68,992:0,68,255:26,0 chr2 207989121 . A . PASS END=207989121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 207989122 . G . PASS END=207989124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 207989125 . A . PASS END=207989128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 207998791 . T . PASS END=207998799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:70:0,120,1800:0,130,255:40,0 chr2 207998800 . C T, 257.65 PASS DP=71;MQ=249.02;FractionInformativeReads=0.986 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,70,0:1.000,0.000:70:0,41,0:0,29,0:208:295,211,0,395,395,395:255,200,0:1,0:2.5765e+02,2.0765e+02,0.0000e+00,3.9242e+02,4.2720e+02,3.9543e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,36,34:0,0,35,35 chr2 207998801 . G . PASS END=207998808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:65:0,120,1800:0,140,255:40,0 chr2 208013706 . C . PASS END=208013714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:86:0,120,1800:0,245,255:40,0 chr2 208013871 . T . PASS END=208013924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:63:0,120,1800:0,140,255:40,0 chr2 208030191 . C . PASS END=208030288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:84:35:0,84,1260:0,105,255:40,0 chr2 208030289 . C . PASS END=208030292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,86,255:25,0 chr2 208031864 . C . PASS END=208031866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 208398929 . A . PASS END=208398929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:91:0,120,1800:0,255,255:40,0 chr2 208420360 . A . PASS END=208420473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:43:0,106,1775:0,106,255:40,0 chr2 208424950 . G . PASS END=208424977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr2 208424978 . C . PASS END=208425021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1016:0,81,255:31,0 chr2 208425022 . A . PASS END=208425024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,79,255:26,0 chr2 208425025 . G . PASS END=208425025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 208425026 . T . PASS END=208425026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:26,0 chr2 208425027 . T . PASS END=208425054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 208425055 . C . PASS END=208425072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,945:0,69,255:26,0 chr2 208425073 . T . PASS END=208425073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 208425074 . C . PASS END=208425077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,764:0,66,255:22,0 chr2 208425078 . A . PASS END=208425078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 208425079 . C . PASS END=208425088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 208425089 . C . PASS END=208425096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:55:23:0,55,754:0,55,255:19,0 chr2 208425843 . T . PASS END=208425884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:64:0,120,1800:0,154,255:40,0 chr2 208432187 . A . PASS END=208432287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:37:0,102,1530:0,111,255:40,0 chr2 208434903 . G . PASS END=208434909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,903:0,81,255:27,0 chr2 208434910 . T . PASS END=208434910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 208434911 . T . PASS END=208434999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1016:0,81,255:35,0 chr2 208435000 . G . PASS END=208435025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,803:0,61,255:26,0 chr2 208435026 . A . PASS END=208435026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 208435027 . A . PASS END=208435030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,834:0,75,255:25,0 chr2 208435031 . G . PASS END=208435031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 208435032 . C . PASS END=208435033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 208435034 . G . PASS END=208435038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:25:0,51,765:0,75,255:19,0 chr2 208435039 . C . PASS END=208435045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:36:20:0,36,540:0,39,255:13,0 chr2 208439996 . T . PASS END=208440139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:32:0,90,1209:0,92,255:40,0 chr2 208440140 . A . PASS END=208440140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 208440141 . G . PASS END=208440145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 208440146 . T . PASS END=208440146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1054:0,77,255:26,0 chr2 208440147 . C . PASS END=208440156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 208440157 . A . PASS END=208440178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,62,255:26,0 chr2 208441355 . G . PASS END=208441371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:50:0,120,1800:0,136,255:40,0 chr2 208441378 . A . PASS END=208441417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:50:0,116,1800:0,116,255:40,0 chr2 208442229 . C . PASS END=208442238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1217:0,86,255:35,0 chr2 208442239 . A . PASS END=208442239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 208442240 . G . PASS END=208442482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:83:37:0,83,1185:0,83,255:40,0 chr2 208444245 . A . PASS END=208444290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:55:0,120,1800:0,139,255:40,0 chr2 208446546 . T . PASS END=208446670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:58:0,120,1800:0,171,255:40,0 chr2 208446871 . T . PASS END=208446884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,239,255:40,0 chr2 208453887 . T . PASS END=208453972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,120,1800:0,141,255:40,0 chr2 208461638 . G . PASS END=208461782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:45:0,104,1712:0,104,255:40,0 chr2 208473184 . G . PASS END=208473184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 208477770 . T . PASS END=208477774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1115:0,80,255:32,0 chr2 208477775 . A . PASS END=208477775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 208477776 . G . PASS END=208477794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:98:33:0,98,1104:0,98,255:40,0 chr2 208477795 . T . PASS END=208477795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1527:0,77,255:40,0 chr2 208477796 . T . PASS END=208477814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,112,1499:0,112,255:40,0 chr2 208477815 . T . PASS END=208477851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,116,1634:0,116,255:40,0 chr2 208477852 . G A, 208.61 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,31,0:0,23,0:159:246,162,0,2012,162,2012:255,162,0:0,0:2.0861e+02,1.5861e+02,0.0000e+00,4.5000e+02,1.9338e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,29,25:0,0,28,26 chr2 208477853 . T . PASS END=208477889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,145,255:40,0 chr2 208477890 . C . PASS END=208477918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,145,255:40,0 chr2 208477919 . G . PASS END=208477955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:52:0,120,1800:0,143,255:40,0 chr2 208477956 . C T, 209.05 PASS DP=54;MQ=240.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,34,0:0,20,0:159:247,162,0,2036,162,2036:255,162,0:0,0:2.0905e+02,1.5905e+02,0.0000e+00,4.5000e+02,1.9382e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,36,18:0,0,30,24 chr2 208477957 . T . PASS END=208477993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:50:0,120,1800:0,134,255:40,0 chr2 208477994 . T . PASS END=208478167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:44:0,102,1530:0,107,255:40,0 chr2 208485365 . C . PASS END=208485418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:52:0,120,1800:0,156,255:40,0 chr2 208485465 . T . PASS END=208485514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:56:0,120,1800:0,130,255:40,0 chr2 208486530 . C . PASS END=208486530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 208486531 . C . PASS END=208486532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 208486533 . G . PASS END=208486541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:27:0,68,1022:0,68,255:26,0 chr2 208486542 . C . PASS END=208486552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:29,0 chr2 208486553 . A . PASS END=208486553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,931:0,54,255:27,0 chr2 208486554 . C . PASS END=208486558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 208486559 . C . PASS END=208486560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 208486561 . C . PASS END=208486562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1080:0,87,255:29,0 chr2 208486563 . T . PASS END=208486563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:27,0 chr2 208486564 . G . PASS END=208486565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 208486566 . C . PASS END=208486566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 208486567 . A . PASS END=208486573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 208486574 . A . PASS END=208486574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:25,0 chr2 208486575 . G . PASS END=208486596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1194:0,83,255:32,0 chr2 208486597 . G . PASS END=208486597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:27,0 chr2 208486598 . A . PASS END=208486599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 208486600 . C . PASS END=208486600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 208486601 . T . PASS END=208486602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 208486603 . C . PASS END=208486603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,1016:0,43,255:26,0 chr2 208486604 . A . PASS END=208486609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1070:0,84,255:28,0 chr2 208486610 . C . PASS END=208486610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 208486611 . C . PASS END=208486613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 208486614 . T . PASS END=208486614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,868:0,51,255:26,0 chr2 208486615 . C . PASS END=208486617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:28,0 chr2 208486618 . C . PASS END=208486618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 208486619 . A . PASS END=208486626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 208486627 . G . PASS END=208486627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 208486628 . G . PASS END=208486629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 208486630 . A . PASS END=208486641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,947:0,64,255:26,0 chr2 208488953 . C . PASS END=208488953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 208488954 . G . PASS END=208488967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:17:0,45,675:0,50,255:19,0 chr2 208488968 . C . PASS END=208488970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 208488971 . T . PASS END=208488971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 208488972 . G . PASS END=208488981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,723:0,60,255:26,0 chr2 208488982 . G . PASS END=208489128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:28:0,80,1047:0,80,255:40,0 chr2 208489615 . C . PASS END=208489660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:35:0,105,1319:0,105,255:40,0 chr2 208494234 . T . PASS END=208494234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 208576621 . A . PASS END=208576634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr2 208576635 . G . PASS END=208576654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 208576655 . A . PASS END=208576666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,620:0,45,255:18,0 chr2 208576667 . A . PASS END=208576667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 208576668 . G . PASS END=208576687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,690:0,54,255:18,0 chr2 208576688 . C . PASS END=208576689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 208576690 . G . PASS END=208576690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 208576691 . C . PASS END=208576692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 208576693 . G . PASS END=208576713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1169:0,80,255:29,0 chr2 208576714 . A . PASS END=208576714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 208576715 . T . PASS END=208576730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 208576731 . C . PASS END=208576731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,2 chr2 208576732 . G . PASS END=208576732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:33:34:0,33,1141:0,33,255:29,2 chr2 208576733 . G . PASS END=208576733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 208576734 . G . PASS END=208576793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1263:0,86,255:36,0 chr2 208576794 . C . PASS END=208576794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:32,0 chr2 208576795 . G . PASS END=208576807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:32,0 chr2 208576808 . T . PASS END=208576808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr2 208576809 . G . PASS END=208576816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 208576817 . T . PASS END=208576817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 208576818 . C . PASS END=208576820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 208576821 . C . PASS END=208576832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 208576833 . G . PASS END=208576833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:22,0 chr2 208576834 . C . PASS END=208576837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:22,0 chr2 208576838 . A . PASS END=208576840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 208589524 . A . PASS END=208589526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 208589527 . T . PASS END=208589527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 208589528 . A . PASS END=208589598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:29:0,87,1086:0,87,255:40,0 chr2 208591566 . T . PASS END=208591600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:106,0:106:99:97:0,120,1800:0,255,255:40,0 chr2 208598671 . G . PASS END=208598771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:88:38:0,88,1295:0,88,255:40,0 chr2 208602135 . T . PASS END=208602170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:87:0,120,1800:0,212,255:40,0 chr2 208605379 . A . PASS END=208605430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:77:0,120,1800:0,173,255:40,0 chr2 208606947 . C . PASS END=208606948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:34:0,96,1440:0,102,255:33,0 chr2 208606949 . A . PASS END=208606950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1186:0,66,255:30,0 chr2 208606951 . A . PASS END=208606953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1075:0,88,255:31,0 chr2 208606954 . A . PASS END=208606954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:30,0 chr2 208606955 . A . PASS END=208606962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:88:33:0,88,1166:0,88,255:33,0 chr2 208606963 . A . PASS END=208606963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1049:0,66,255:31,0 chr2 208606964 . G . PASS END=208606980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:34:0,87,1199:0,87,255:40,0 chr2 208606981 . A . PASS END=208606981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1584:0,75,255:40,0 chr2 208606982 . T . PASS END=208607066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:91:33:0,91,1395:0,91,255:40,0 chr2 208611771 . G . PASS END=208611779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:82:30:0,82,1139:0,82,255:33,0 chr2 208611780 . G . PASS END=208611780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1111:0,60,255:32,0 chr2 208611781 . A . PASS END=208611804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1160:0,81,255:38,0 chr2 208611805 . T . PASS END=208611805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:50:38:0,50,1285:0,50,255:34,0 chr2 208611806 . C . PASS END=208611813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:94:37:0,94,1296:0,94,255:39,0 chr2 208611814 . G . PASS END=208611814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:38,0 chr2 208611815 . T . PASS END=208611909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1101:0,80,255:40,0 chr2 208611910 . T . PASS END=208611910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 208611911 . C . PASS END=208611914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 208611915 . A . PASS END=208611922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,68,255:24,0 chr2 208611923 . T . PASS END=208611928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:57:25:0,57,855:0,68,255:19,0 chr2 208611929 . T . PASS END=208611930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:19,0 chr2 208611931 . A . PASS END=208611932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:19,0 chr2 208611933 . G . PASS END=208611935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 208611936 . A . PASS END=208611936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:19,0 chr2 208611937 . T . PASS END=208611937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 208615681 . G . PASS END=208615843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:82:38:0,82,1350:0,82,255:40,0 chr2 208618312 . G . PASS END=208618314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 208618315 . A . PASS END=208618321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:28:0,84,1041:0,84,255:31,0 chr2 208618322 . G . PASS END=208618322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 208618323 . A . PASS END=208618422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1001:0,80,255:40,0 chr2 208626361 . C . PASS END=208626405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,112,1753:0,112,255:40,0 chr2 208631706 . C . PASS END=208631711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,714:0,57,255:19,0 chr2 208631712 . G . PASS END=208631803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,630:0,40,255:19,0 chr2 208631804 . C . PASS END=208631814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr2 208631815 . G . PASS END=208631820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr2 208631821 . C . PASS END=208631828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 208631829 . G . PASS END=208631829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:13,0 chr2 208631830 . T . PASS END=208631831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 208631832 . G . PASS END=208631841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 208631842 . G . PASS END=208631842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 208631843 . G . PASS END=208631859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 208631860 . C . PASS END=208631861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 208631862 . G . PASS END=208631862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 208631863 . G . PASS END=208631878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:13,0 chr2 208631879 . A . PASS END=208631892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:18,0 chr2 208631893 . C . PASS END=208631893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,545:0,15,255:17,0 chr2 208631894 . C . PASS END=208631943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:18,0 chr2 208631944 . T . PASS END=208631944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:16,0 chr2 208631945 . A . PASS END=208631949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 208631950 . A . PASS END=208631964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:22,0 chr2 208631965 . T . PASS END=208631965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:25:24:0,25,715:0,25,255:20,0 chr2 208631966 . A . PASS END=208631967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 208631968 . T . PASS END=208631968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 208631969 . C . PASS END=208631971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 208631972 . G . PASS END=208631972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 208631973 . C . PASS END=208631977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 208631978 . C . PASS END=208631979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:21,0 chr2 208631980 . C . PASS END=208631980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr2 208631981 . G . PASS END=208631983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 208631984 . G . PASS END=208631984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 208631985 . C . PASS END=208631993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,743:0,47,255:19,0 chr2 208631994 . G . PASS END=208632006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:20,0 chr2 208632007 . C . PASS END=208632007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,619:0,27,255:18,0 chr2 208632008 . A . PASS END=208632008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:18,0 chr2 208632009 . G . PASS END=208632009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 208632010 . G . PASS END=208632011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 208632012 . G . PASS END=208632018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 208632019 . A . PASS END=208632019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 208632020 . G . PASS END=208632024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 208632025 . G . PASS END=208632033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 208632034 . C . PASS END=208632034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 208632035 . T . PASS END=208632066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,665:0,41,255:19,0 chr2 208632067 . G . PASS END=208632071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 208632072 . C . PASS END=208632073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 208632074 . C . PASS END=208632076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 208632077 . T . PASS END=208632080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,698:0,46,255:20,0 chr2 208632081 . G . PASS END=208632087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 208632088 . A . PASS END=208632090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:22:0,50,743:0,50,255:17,0 chr2 208632091 . G . PASS END=208632094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:21,0 chr2 208632095 . A . PASS END=208632095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:20,0 chr2 208632096 . G . PASS END=208632098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 208632099 . C . PASS END=208632099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:19,0 chr2 208632100 . A . PASS END=208632102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 208632103 . G . PASS END=208632109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,751:0,50,255:19,0 chr2 208632110 . T . PASS END=208632114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 208632115 . A . PASS END=208632115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 208632116 . T . PASS END=208632121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 208632122 . T . PASS END=208632122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 208632123 . C . PASS END=208632123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 208632124 . A . PASS END=208632124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 208632125 . T . PASS END=208632127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 208632128 . G . PASS END=208632128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 208632129 . C . PASS END=208632147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,807:0,66,255:24,0 chr2 208632148 . T . PASS END=208632150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 208632151 . G . PASS END=208632170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,845:0,66,255:25,0 chr2 208632171 . G . PASS END=208632171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 208632172 . C . PASS END=208632192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:23,0 chr2 208632193 . A . PASS END=208632193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 208632194 . C . PASS END=208632196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 208632197 . A . PASS END=208632197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,744:0,55,255:20,0 chr2 208632198 . G . PASS END=208632201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 208632202 . G . PASS END=208632202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 208632203 . C . PASS END=208632205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 208632206 . G . PASS END=208632206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 208632207 . C . PASS END=208632250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 208632251 . G . PASS END=208632252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 208632253 . A . PASS END=208632300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,900:0,65,255:26,0 chr2 208632301 . C . PASS END=208632301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 208632302 . C . PASS END=208632307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 208632308 . C . PASS END=208632311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 208632312 . G . PASS END=208632320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,861:0,66,255:23,0 chr2 208632321 . C . PASS END=208632321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 208632322 . A . PASS END=208632351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,886:0,61,255:26,0 chr2 208632352 . T . PASS END=208632352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,801:0,51,255:24,0 chr2 208632353 . T . PASS END=208632383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr2 208632384 . G . PASS END=208632384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 208632385 . A . PASS END=208632398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:27:0,71,1024:0,71,255:26,0 chr2 208632399 . G . PASS END=208632418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1031:0,84,255:28,0 chr2 208632419 . C . PASS END=208632422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:26,0 chr2 208632423 . C . PASS END=208632432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 208632433 . G . PASS END=208632435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 208632436 . G . PASS END=208632445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1156:0,90,255:31,0 chr2 208632446 . A . PASS END=208632446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:30,0 chr2 208632447 . G . PASS END=208632490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1162:0,80,255:33,0 chr2 208632491 . A . PASS END=208632499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr2 208632500 . C . PASS END=208632500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 208632501 . C . PASS END=208632518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,77,255:26,0 chr2 208632519 . G . PASS END=208632520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 208632521 . A . PASS END=208632625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,778:0,66,255:25,0 chr2 208632626 . A . PASS END=208632626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 208632627 . C . PASS END=208632656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,837:0,66,255:23,0 chr2 208632657 . G . PASS END=208632723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:17,0 chr2 208632724 . A . PASS END=208632737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:13:0,32,495:0,32,255:13,0 chr2 208632738 . C . PASS END=208632745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 208632746 . C . PASS END=208632747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 208632748 . A . PASS END=208632763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:14,0 chr2 208632764 . A . PASS END=208632770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 208632771 . C . PASS END=208632775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 208632776 . C . PASS END=208632776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 208632777 . G . PASS END=208632787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:18,0 chr2 208632788 . A . PASS END=208632788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 208632789 . C . PASS END=208632802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,668:0,54,255:19,0 chr2 208632803 . G . PASS END=208632894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,723:0,60,255:25,0 chr2 208632895 . C . PASS END=208632895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 208632896 . A . PASS END=208632897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 208632898 . A . PASS END=208632898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 208632899 . C . PASS END=208632901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:20,0 chr2 208632902 . A . PASS END=208632902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr2 208632903 . C . PASS END=208632922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 208632923 . C . PASS END=208632926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 208632927 . C . PASS END=208632928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 208632929 . C . PASS END=208632934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 208632935 . C . PASS END=208632947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 208632948 . C . PASS END=208632964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,659:0,44,255:18,0 chr2 208632965 . G . PASS END=208632965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 208632966 . C . PASS END=208632971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,637:0,51,255:17,0 chr2 208632972 . T . PASS END=208632974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:34:17:0,34,566:0,34,255:15,0 chr2 208632975 . G . PASS END=208632977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 208632978 . A . PASS END=208632994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:12:0,30,450:0,36,255:12,0 chr2 208632995 . T . LowGQ END=208632996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:9,0 chr2 208632997 . G . PASS END=208632997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 208632998 . T . PASS END=208633014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 208633015 . T . LowGQ END=208633015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,269:3,0,255:6,0 chr2 208633016 . A . PASS END=208633043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:8,0 chr2 208633044 . G . PASS END=208633050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 208633051 . A . PASS END=208633057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 208633058 . G . PASS END=208633063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 208633064 . C . PASS END=208633065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 208633066 . C . PASS END=208633066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 208633067 . A . PASS END=208633079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,360:0,27,255:9,0 chr2 208633080 . G . PASS END=208633123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:11:4:0,11,155:0,11,155:7,0 chr2 208633124 . C . PASS END=208633126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 208633127 . T . PASS END=208633127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 208633128 . G . PASS END=208633133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 208633134 . C . PASS END=208633149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:13,0 chr2 208633150 . C . PASS END=208633150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,421:0,11,255:12,0 chr2 208633151 . A . PASS END=208633156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 208633157 . G . PASS END=208633177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:16,0 chr2 208633178 . G . PASS END=208633178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr2 208633179 . C . PASS END=208633183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,596:0,48,255:16,0 chr2 208633184 . A . PASS END=208633184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:13,0 chr2 208633185 . G . PASS END=208633192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 208633193 . T . PASS END=208633237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,754:0,63,255:23,0 chr2 208633238 . T . PASS END=208633238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,709:0,38,255:22,0 chr2 208633239 . C . PASS END=208633239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr2 208633240 . T . PASS END=208633240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:22,0 chr2 208633241 . C . PASS END=208633247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 208633248 . C . PASS END=208633256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,787:0,33,255:23,0 chr2 208633257 . C . PASS END=208633260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 208633261 . T . PASS END=208633262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 208633263 . C . PASS END=208633266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 208633267 . T . PASS END=208633267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 208633268 . C . PASS END=208633269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 208633270 . A . PASS END=208633270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 208633271 . G . PASS END=208633271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 208633272 . G . PASS END=208633272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 208633273 . C . PASS END=208633279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 208633280 . C . PASS END=208633330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,607:0,40,255:18,0 chr2 208633331 . C . PASS END=208633341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr2 208633342 . C . PASS END=208633361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,604:0,48,255:17,0 chr2 208633362 . C . PASS END=208633362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 208633363 . T . PASS END=208633375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,576:0,48,255:17,0 chr2 208633376 . C . PASS END=208633412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:17,0 chr2 208633413 . T C, 91.68 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,4,0:0,11,0:42:129,45,0,552,45,552:255,45,0:0,0:9.1683e+01,4.1683e+01,2.9485e-04,4.5000e+02,7.6453e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,3,12:0,0,8,7 chr2 208633414 . A . PASS END=208633421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 208633422 . C . PASS END=208633422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 208633423 . A . PASS END=208633423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 208633424 . G . PASS END=208633443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 208633444 . G . PASS END=208633444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 208633445 . A . PASS END=208633447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 208633448 . G . PASS END=208633450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:12:0,24,360:0,36,255:9,0 chr2 208633451 . C . PASS END=208633463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,310:0,24,255:8,0 chr2 208693043 . T . PASS END=208693048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr2 208693049 . G . PASS END=208693054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr2 208693055 . G . PASS END=208693055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 208693056 . T . PASS END=208693074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,824:0,61,255:26,0 chr2 208693075 . T . PASS END=208693075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr2 208693076 . G . PASS END=208693076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 208693077 . C . PASS END=208693077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr2 208693078 . A . PASS END=208693090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr2 208693091 . A . PASS END=208693190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1125:0,80,255:37,0 chr2 208693191 . G . PASS END=208693191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1121:0,71,255:32,0 chr2 208693192 . A . PASS END=208693210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1186:0,83,255:33,0 chr2 208693211 . G . PASS END=208693211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 208693212 . C . PASS END=208693212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 208693213 . T . PASS END=208693219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,80,255:25,0 chr2 208693220 . C . PASS END=208693220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 208717514 . T . PASS END=208717559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,144,255:40,0 chr2 208725829 . C . PASS END=208725835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr2 208725836 . T . PASS END=208725986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:27:0,81,986:0,81,255:40,0 chr2 208733643 . T . PASS END=208733666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:98:0,120,1800:0,255,255:40,0 chr2 208751363 . T . PASS END=208751425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:34:0,84,1258:0,84,255:40,0 chr2 208766002 . T . PASS END=208766031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,144,255:40,0 chr2 208773238 . C . PASS END=208773301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:64:0,120,1800:0,153,255:40,0 chr2 208794621 . C . PASS END=208794664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:68:0,120,1800:0,187,255:40,0 chr2 208795650 . C . PASS END=208795660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:13,0 chr2 208795661 . A . PASS END=208795661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 208795662 . T . PASS END=208795662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 208795663 . C . PASS END=208795663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 208795664 . C . PASS END=208795670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 208795671 . A . PASS END=208795709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:18,0 chr2 208795710 . T . PASS END=208795710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 208795711 . T . PASS END=208795713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 208795714 . G . PASS END=208795714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 208795715 . C . PASS END=208795716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 208795717 . G . PASS END=208795717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 208795718 . C . PASS END=208795726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr2 208795727 . C . PASS END=208795728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 208795729 . G . PASS END=208795729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 208795730 . C . PASS END=208795749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr2 208795750 . C . PASS END=208795756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 208795757 . G . PASS END=208795762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 208795763 . C . PASS END=208795798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 208795799 . C . PASS END=208795832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:13,0 chr2 208795833 . T . PASS END=208795843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:9,0 chr2 208811091 . C . PASS END=208811096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:31,0 chr2 208811097 . C T, 49.73 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=1.775;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,15,0:0.469,0.000:32:8,8,0:9,7,0:48:85,0,50,528,600,1128:255,0,255:17,0:4.9731e+01,6.7822e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,5,11,4:11,6,8,7 chr2 208811098 . T . PASS END=208811134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:32:0,93,1121:0,96,255:40,0 chr2 208811135 . T . PASS END=208811236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:97:39:0,97,1485:0,97,255:40,0 chr2 208841375 . C . PASS END=208841529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:36:0,82,1310:0,82,255:40,0 chr2 208841530 . T . PASS END=208841531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1143:0,69,255:33,0 chr2 208841532 . T . PASS END=208841534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1316:0,92,255:33,0 chr2 208841535 . C . PASS END=208841536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:31,0 chr2 208841537 . C . PASS END=208841553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:32:0,81,1210:0,86,255:33,0 chr2 208841554 . T . PASS END=208841581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,70,255:26,0 chr2 208841582 . A . PASS END=208841582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 208841583 . T . PASS END=208841604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,831:0,69,255:24,0 chr2 208841605 . T . PASS END=208841605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 208841606 . C . PASS END=208841608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 208841609 . C . PASS END=208841613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 208841614 . A . PASS END=208841615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 208841616 . G . PASS END=208841616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:20,0 chr2 208841617 . C . PASS END=208841625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 208841626 . T . PASS END=208841626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 208841627 . C . PASS END=208841631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 208841632 . G . PASS END=208841632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 208841633 . G . PASS END=208841640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 208841641 . A . PASS END=208841641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:19,0 chr2 208841642 . C . PASS END=208841642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 208841643 . T . PASS END=208841643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,586:0,43,255:19,0 chr2 208841644 . T . PASS END=208841644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:19,0 chr2 208841645 . G . PASS END=208841646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 208841647 . A . PASS END=208841647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 208841648 . A . PASS END=208841650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 208841651 . A . PASS END=208841660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 208841661 . G . PASS END=208841661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,653:0,21,255:16,0 chr2 208841662 . C . PASS END=208841669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 208841670 . G . PASS END=208841671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 208841672 . T . PASS END=208841672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:19,0 chr2 208841673 . G . PASS END=208841675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 208841676 . C . PASS END=208841685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 208841686 . G . PASS END=208841714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,764:0,61,255:25,0 chr2 208841715 . C . PASS END=208841715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 208841716 . A . PASS END=208841717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 208841718 . T . PASS END=208841724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 208841725 . T . PASS END=208841725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 208841726 . C . PASS END=208841735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:32,0 chr2 208841736 . G . PASS END=208841737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:31:0,66,1094:0,66,255:31,0 chr2 208841738 . C . PASS END=208841926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:33:0,81,1163:0,81,255:40,0 chr2 208841927 . C . PASS END=208841963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:33:0,88,1197:0,88,255:36,0 chr2 208841964 . A G, 48.91 PASS DP=32;MQ=250.00;MQRankSum=4.767;ReadPosRankSum=1.614;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,14,0:0.438,0.000:32:12,8,0:6,6,0:47:84,0,50,501,644,1144:255,0,255:18,0:4.8908e+01,7.7659e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,8,7,7:12,6,9,5 chr2 208841965 . T . PASS END=208842001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:35,0 chr2 208842002 . C . PASS END=208842002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr2 208842003 . T . PASS END=208842003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:31,0 chr2 208842004 . A . PASS END=208842007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:36:0,93,1395:0,108,255:31,0 chr2 208842008 . C . PASS END=208842008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:31,0 chr2 208842009 . C . PASS END=208842088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1148:0,83,255:34,0 chr2 208842089 . T . PASS END=208842089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1235:0,67,255:29,0 chr2 208842090 . A . PASS END=208842126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:35:0,92,1298:0,92,255:38,0 chr2 208842127 . A . PASS END=208842127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1284:0,68,255:33,0 chr2 208842128 . T . PASS END=208842310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1260:0,81,255:40,0 chr2 208865754 . C . PASS END=208865754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,656:0,63,255:21,0 chr2 208865755 . A . PASS END=208865755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr2 208865756 . G . PASS END=208865758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,901:0,64,255:25,0 chr2 208865759 . T . PASS END=208865759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:25,0 chr2 208865760 . T . PASS END=208865760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:24,0 chr2 208865761 . T . PASS END=208865765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1125:0,82,255:31,0 chr2 208865766 . G . PASS END=208865766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1116:0,66,255:30,0 chr2 208865767 . A . PASS END=208865767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1061:0,49,255:29,0 chr2 208865768 . G . PASS END=208865769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1119:0,82,255:31,0 chr2 208865770 . A . PASS END=208865770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:35:33:0,35,972:0,35,255:29,0 chr2 208865771 . T . PASS END=208865771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 208865772 . C . PASS END=208865772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:32,0 chr2 208865773 . T . PASS END=208865774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1282:0,102,255:35,0 chr2 208865775 . C . PASS END=208865775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1127:0,50,255:33,0 chr2 208865776 . T . PASS END=208865776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1225:0,89,255:34,0 chr2 208865777 . A . PASS END=208865777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1202:0,75,255:34,0 chr2 208865778 . T . PASS END=208865877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1294:0,81,255:40,0 chr2 208865878 . G . PASS END=208865878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:45:39:0,45,1227:0,45,255:33,0 chr2 208865879 . A . PASS END=208866146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1150:0,82,255:40,0 chr2 208866147 . A . PASS END=208866147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:31,0 chr2 208866148 . A . PASS END=208866182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:32:0,83,1129:0,83,255:36,0 chr2 208866183 . T . PASS END=208866183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1294:0,70,255:32,0 chr2 208866184 . C . PASS END=208866270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1157:0,82,255:34,0 chr2 208866271 . C . PASS END=208866281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:77:31:0,77,1131:0,77,255:26,0 chr2 208866282 . C . PASS END=208866316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,988:0,84,255:31,0 chr2 208866317 . G . PASS END=208866317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 208866318 . T . PASS END=208866322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 208866323 . T . PASS END=208866323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 208866324 . C . PASS END=208866329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 208866330 . C . PASS END=208866363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,878:0,72,255:25,0 chr2 208986397 . T . PASS END=208986417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,319:0,30,255:12,0 chr2 208986418 . C . PASS END=208986421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 208986422 . A . PASS END=208986422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 208986423 . G . PASS END=208986448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,558:0,45,255:19,0 chr2 208986449 . C . PASS END=208986470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,806:0,63,255:24,0 chr2 208986471 . A . PASS END=208986471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 208986472 . G . PASS END=208986492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,970:0,72,255:26,0 chr2 208986493 . C . PASS END=208986495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 208986496 . C . PASS END=208986497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 208986498 . G . PASS END=208986499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 208986500 . C . PASS END=208986500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 208986501 . C . PASS END=208986513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr2 208986514 . C . PASS END=208986515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:25,0 chr2 208986516 . G . PASS END=208986568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:34:0,90,1350:0,95,255:38,0 chr2 208986569 . A . PASS END=208986569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr2 208986570 . A . PASS END=208986599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:36:0,90,1521:0,90,255:40,0 chr2 208986600 . C . PASS END=208986636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:34:0,84,1260:0,95,255:38,0 chr2 208986637 . T C, 149.33 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,16,0:0,18,0:99:187,102,0,1310,102,1310:255,102,0:0,0:1.4933e+02,9.9328e+01,0.0000e+00,4.5000e+02,1.3410e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,19:0,0,15,19 chr2 208986638 . C . PASS END=208986641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 208986642 . C . PASS END=208986643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 208986644 . T . PASS END=208986644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 208986645 . A . PASS END=208986650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,986:0,70,255:26,0 chr2 208986651 . T . PASS END=208986651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:24,0 chr2 208986652 . G . PASS END=208986658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,75,255:24,0 chr2 208986659 . T . PASS END=208986669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:22:0,54,810:0,58,255:19,0 chr2 208988836 . G . PASS END=208988884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,396:0,33,255:13,0 chr2 208988885 . T . PASS END=208988885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 208988886 . G . PASS END=208988890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 208988891 . T . PASS END=208988891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 208988892 . G . PASS END=208988895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 208988896 . G . PASS END=208988906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 208988907 . C . PASS END=208988908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 208988909 . C . PASS END=208988910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 208988911 . G . PASS END=208988917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 208988918 . A . PASS END=208988920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:37:17:0,37,585:0,37,255:14,0 chr2 208988921 . T . PASS END=208988923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 208988924 . T . PASS END=208988935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 208988936 . T . PASS END=208988949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr2 208988950 . A . PASS END=208988952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 208988953 . G . PASS END=208988999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,537:0,45,255:17,0 chr2 208989000 . A . PASS END=208989014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,558:0,45,255:16,0 chr2 208989015 . T . PASS END=208989036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,425:0,36,255:13,0 chr2 208989037 . A G, 45.92 PASS DP=12;MQ=108.15;MQRankSum=-1.000;ReadPosRankSum=2.793;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:7,5,0:0.417,0.000:12:2,3,0:5,2,0:45:81,0,47,179,250,429:158,0,235:7,0:4.5923e+01,1.5402e-04,5.0050e+01,1.7886e+02,2.8513e+02,4.3220e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,5,3,2:3,4,3,2 chr2 208989038 . T . PASS END=208989052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,435:0,36,255:12,0 chr2 208989053 . A . PASS END=208989074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,302:0,24,255:9,0 chr2 208989075 . T . PASS END=208989078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:8,0 chr2 208989187 . A . PASS END=208989187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 208989189 . C . PASS END=208989197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,925:0,75,255:26,0 chr2 208989230 . T . PASS END=208989230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 208992927 . T . PASS END=208992937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:6,0 chr2 208992938 . C . PASS END=208992956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,258:0,24,255:9,0 chr2 208992957 . G . PASS END=208992975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:13,0 chr2 208992976 . G . PASS END=208992995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:16:0,48,612:0,48,255:19,0 chr2 208992996 . C . PASS END=208992996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 208992997 . C . PASS END=208992998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 208992999 . G . PASS END=208992999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 208993000 . T . PASS END=208993003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 208993004 . C . PASS END=208993024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr2 208993025 . G . PASS END=208993025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 208993026 . C . PASS END=208993064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,853:0,61,255:26,0 chr2 208993065 . G . PASS END=208993074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 208993075 . A . PASS END=208993075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 208993076 . C . PASS END=208993076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 208993077 . G . PASS END=208993083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,917:0,67,255:26,0 chr2 208993084 . G . PASS END=208993091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1056:0,87,255:29,0 chr2 208993092 . C . PASS END=208993092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 208993093 . T . PASS END=208993098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1040:0,87,255:29,0 chr2 208993099 . A . PASS END=208993109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1031:0,71,255:25,0 chr2 208993110 . G . PASS END=208993117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 208993118 . T . PASS END=208993133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:26:0,62,937:0,62,255:26,0 chr2 208993134 . A . PASS END=208993134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,892:0,47,255:22,0 chr2 208993135 . C . PASS END=208993138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,953:0,62,255:23,0 chr2 208993139 . G . PASS END=208993139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:22,0 chr2 208993140 . C . PASS END=208993140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:22,0 chr2 208993141 . T . PASS END=208993141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 208993142 . C . PASS END=208993142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:20,0 chr2 208993143 . C . PASS END=208993143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,725:0,22,255:19,0 chr2 208993144 . A . PASS END=208993146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 208993147 . A . PASS END=208993148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 208993149 . G . PASS END=208993150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 208993151 . G . PASS END=208993151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 208993152 . G . PASS END=208993154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 208993155 . T . PASS END=208993155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,615:0,33,255:20,0 chr2 208993156 . T . PASS END=208993156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 208993157 . T . PASS END=208993157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 208993158 . G . PASS END=208993159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 208993160 . G . PASS END=208993160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 208993161 . G . PASS END=208993163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 208993164 . T . PASS END=208993168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 208993169 . T . PASS END=208993169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,702:0,33,255:17,0 chr2 208993170 . C . PASS END=208993177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 208993178 . G . PASS END=208993178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:18,0 chr2 208993179 . C . PASS END=208993180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 208993181 . G . PASS END=208993181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:18,0 chr2 208993182 . C . PASS END=208993194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 208993195 . A . PASS END=208993199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:17:0,33,495:0,51,255:13,0 chr2 208994165 . T . PASS END=208994169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,621:0,51,255:17,0 chr2 208994170 . G . PASS END=208994170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr2 208994171 . G . PASS END=208994183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:19,0 chr2 208994184 . G . PASS END=208994184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 208994185 . A . PASS END=208994185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr2 208994186 . G . PASS END=208994197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 208994198 . G . PASS END=208994202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,695:0,63,255:21,0 chr2 208994203 . G . PASS END=208994203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 208994204 . G . PASS END=208994208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 208994209 . T . PASS END=208994209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:20,0 chr2 208994210 . C . PASS END=208994214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,900:0,66,255:24,0 chr2 208994215 . G . PASS END=208994216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 208994217 . T . PASS END=208994225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:25,0 chr2 208994226 . G . PASS END=208994226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 208994227 . G . PASS END=208994227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1016:0,54,255:26,0 chr2 208994228 . G . PASS END=208994236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 208994237 . T . PASS END=208994237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 208994238 . C . PASS END=208994244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 208994245 . G . PASS END=208994245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 208994246 . C . PASS END=208994246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 208994247 . A . PASS END=208994264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,917:0,64,255:25,0 chr2 208994265 . T . PASS END=208994265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 208994266 . A . PASS END=208994266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 208994267 . G . PASS END=208994267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 208994268 . T . PASS END=208994270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 208994271 . G . PASS END=208994273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 208994274 . C T, 50.00 PASS DP=24;MQ=246.36;MQRankSum=2.165;ReadPosRankSum=3.204;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,12,0:0.500,0.000:24:5,7,0:7,5,0:48:85,0,50,413,428,841:255,0,255:8,0:5.0000e+01,6.5233e-05,5.3000e+01,4.1318e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,5,7:4,8,8,4 chr2 208994275 . G . PASS END=208994275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 208994276 . C . PASS END=208994281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 208994282 . G . PASS END=208994282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 208994283 . A . PASS END=208994311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:23,0 chr2 208994312 . G . PASS END=208994327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,894:0,72,255:26,0 chr2 208994328 . A . PASS END=208994331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 208994332 . A . PASS END=208994332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:26,0 chr2 208994333 . C . PASS END=208994345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 208994346 . G . PASS END=208994347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 208994348 . G . PASS END=208994352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 208994353 . C . PASS END=208994385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr2 208994386 . C . PASS END=208994388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 208994389 . T . PASS END=208994407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:62:26:0,62,865:0,62,255:26,0 chr2 208994508 . C . PASS END=208994516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,100,1352:0,100,255:39,0 chr2 209007362 . T . PASS END=209007421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,574:0,45,255:18,0 chr2 209007422 . A . PASS END=209007422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 209007423 . A . PASS END=209007426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,615:0,54,255:18,0 chr2 209007427 . A . PASS END=209007446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:30:12:0,30,450:0,36,255:15,0 chr2 209007447 . C . PASS END=209007448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 209007449 . C . PASS END=209007449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 209007450 . A . PASS END=209007450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 209007451 . G . PASS END=209007453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 209007454 . G . PASS END=209007454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr2 209007455 . A . PASS END=209007466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 209007467 . C . PASS END=209007468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 209007469 . T . PASS END=209007470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 209007471 . T . PASS END=209007473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 209007474 . T . PASS END=209007474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 209007475 . T . PASS END=209007475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 209007476 . G . PASS END=209007480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,426:0,33,255:11,0 chr2 209007481 . T . PASS END=209007481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,388:0,5,255:10,0 chr2 209007482 . C . PASS END=209007488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 209007489 . A . PASS END=209007489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:10,0 chr2 209007490 . G . PASS END=209007510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,465:0,36,255:13,0 chr2 209007511 . C . PASS END=209007521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,560:0,45,255:16,0 chr2 209007522 . T . PASS END=209007558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,604:0,48,255:19,0 chr2 209007559 . T G, 48.25 PASS DP=20;MQ=250.00;MQRankSum=3.665;ReadPosRankSum=2.353;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,8,0:0.400,0.000:20:4,5,0:8,3,0:47:83,0,50,286,429,715:250,0,255:11,0:4.8251e+01,8.6719e-05,5.3000e+01,2.8615e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,4,5,3:4,8,4,4 chr2 209007560 . A . PASS END=209007596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,660:0,57,255:19,0 chr2 209007597 . T . PASS END=209007633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,630:0,41,255:19,0 chr2 209007634 . A . PASS END=209007634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,580:0,37,255:14,0 chr2 209007635 . G . PASS END=209007637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 209010492 . A . PASS END=209010520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:82:56:0,82,1787:0,82,255:40,0 chr2 209010521 . G . PASS END=209010557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:49:0,120,1800:0,123,255:40,0 chr2 209010558 . A G, 50.00 PASS DP=49;MQ=243.79;MQRankSum=1.619;ReadPosRankSum=3.021;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,24,0:0.500,0.000:48:13,14,0:11,10,0:48:85,0,50,850,830,1680:255,0,255:23,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,6,18:16,8,10,14 chr2 209010559 . G . PASS END=209010595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:42:0,96,1472:0,96,255:40,0 chr2 209010596 . G . PASS END=209010621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:33:0,83,1164:0,83,255:36,0 chr2 209010622 . C . PASS END=209010622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:27,0 chr2 209010623 . A . PASS END=209010623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 209010624 . G . PASS END=209010645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,74,255:26,0 chr2 209010646 . G . PASS END=209010650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 209010651 . G . PASS END=209010651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 209010652 . C . PASS END=209010663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,986:0,81,255:30,0 chr2 209010664 . T . PASS END=209010664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 209010665 . A . PASS END=209010702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1119:0,80,255:33,0 chr2 209010703 . C . PASS END=209010703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:27,0 chr2 209010704 . T . PASS END=209010704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 209010705 . G . PASS END=209010705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 209010706 . C . PASS END=209010740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:31:0,81,1156:0,81,255:36,0 chr2 209010836 . C . PASS END=209010844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 209025528 . T . PASS END=209025544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,366:0,33,255:12,0 chr2 209025545 . C . PASS END=209025545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 209025546 . C . PASS END=209025563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,352:0,33,255:11,0 chr2 209025564 . T . PASS END=209025564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 209025565 . T . PASS END=209025594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,382:0,33,255:13,0 chr2 209025595 . C . PASS END=209025595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 209025596 . T . PASS END=209025596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 209025597 . T . PASS END=209025600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 209025601 . T . PASS END=209025602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,457:0,25,255:11,0 chr2 209025603 . G . PASS END=209025605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 209025606 . C . PASS END=209025606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:12,0 chr2 209025607 . C . PASS END=209025613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 209025614 . T . PASS END=209025614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 209025615 . C . PASS END=209025615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 209025616 . A . PASS END=209025622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 209025623 . A . PASS END=209025623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 209025624 . C . PASS END=209025634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,535:0,45,255:18,0 chr2 209025635 . G . PASS END=209025635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 209025636 . G . PASS END=209025638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 209025639 . G . PASS END=209025640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 209025641 . T . PASS END=209025646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,650:0,54,255:18,0 chr2 209025647 . T . PASS END=209025651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,662:0,60,255:20,0 chr2 209025652 . T . PASS END=209025652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 209025653 . A . PASS END=209025653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 209025654 . G . PASS END=209025665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,706:0,46,255:19,0 chr2 209025666 . G . PASS END=209025670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:22,0 chr2 209025671 . C . PASS END=209025671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 209025672 . C . PASS END=209025679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 209025680 . G . PASS END=209025680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,796:0,39,255:21,0 chr2 209025681 . G . PASS END=209025684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,876:0,69,255:25,0 chr2 209025685 . G . PASS END=209025691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 209025692 . T . PASS END=209025692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr2 209025693 . C . PASS END=209025695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 209025696 . A . PASS END=209025696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:27,0 chr2 209025697 . G . PASS END=209025701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:30,0 chr2 209025702 . A . PASS END=209025702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1031:0,59,255:29,0 chr2 209025703 . C . PASS END=209025707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 209025708 . C . PASS END=209025708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 209025709 . A . PASS END=209025738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1048:0,87,255:30,0 chr2 209025739 . A . PASS END=209025739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 209025740 . G . PASS END=209025742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 209025743 . C . PASS END=209025765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr2 209025766 . T . PASS END=209025784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:20:0,42,630:0,43,255:19,0 chr2 209025785 . A . PASS END=209025800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:13,0 chr2 209027928 . A . PASS END=209027930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 209027931 . A . PASS END=209027932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 209027933 . G . PASS END=209027933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 209027934 . A . PASS END=209027934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 209027935 . A . PASS END=209027936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 209027937 . T . PASS END=209027937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 209027938 . A . PASS END=209027960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,675:0,44,255:19,0 chr2 209027961 . G . PASS END=209027962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 209027963 . T . PASS END=209027965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 209027966 . G . PASS END=209027966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 209027967 . G . PASS END=209027967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr2 209027968 . C . PASS END=209027981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr2 209027982 . A . PASS END=209027982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 209027983 . T . PASS END=209028007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:26,0 chr2 209028008 . G . PASS END=209028008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:25,0 chr2 209028009 . G . PASS END=209028041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,901:0,75,255:26,0 chr2 209028042 . A . PASS END=209028042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:23,0 chr2 209028043 . T . PASS END=209028056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 209028057 . G . PASS END=209028057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 209028058 . C . PASS END=209028076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,64,255:25,0 chr2 209028077 . A . PASS END=209028077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr2 209028078 . G . PASS END=209028078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:20,0 chr2 209028079 . T . PASS END=209028084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 209028085 . C . PASS END=209028085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 209028086 . G . PASS END=209028086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:19,0 chr2 209028087 . G . PASS END=209028087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 209028088 . C . PASS END=209028088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,821:0,33,255:20,0 chr2 209028089 . T . PASS END=209028089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 209028090 . G . PASS END=209028120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,778:0,65,255:23,0 chr2 209028121 . A . PASS END=209028121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 209028122 . T . PASS END=209028131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 209028132 . G . PASS END=209028132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:22,0 chr2 209028133 . C . PASS END=209028153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:23,0 chr2 209028154 . T . PASS END=209028170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 209028272 . C . PASS END=209028280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:36,0 chr2 209030463 . T . PASS END=209030531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:70:0,120,1800:0,133,255:40,0 chr2 209030532 . T . PASS END=209030539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:76:0,120,1800:0,212,255:40,0 chr2 209035669 . T . PASS END=209035669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,964:0,48,255:29,0 chr2 209035670 . T . PASS END=209035695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:83:33:0,83,1200:0,83,255:38,0 chr2 209035696 . C . PASS END=209035780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:95:36:0,95,1341:0,95,255:40,0 chr2 209035781 . T . PASS END=209035781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1134:0,78,255:32,0 chr2 209035782 . T . PASS END=209035787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,95,255:33,0 chr2 209036712 . T C, 154.90 PASS DP=36;MQ=249.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1347,108,1347:255,108,0:0,0:1.5490e+02,1.0490e+02,0.0000e+00,4.5000e+02,1.3967e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,8:0,0,18,18 chr2 209036713 . C . PASS END=209036725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1404:0,87,255:36,0 chr2 209036726 . T . PASS END=209036726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:36,0 chr2 209036727 . A . PASS END=209036777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:38:0,84,1404:0,84,255:40,0 chr2 209036778 . A G, 161.36 PASS DP=38;MQ=249.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,19,0:0,19,0:111:199,114,0,299,299,299:255,114,0:0,0:1.6136e+02,1.1136e+02,0.0000e+00,2.9613e+02,3.3090e+02,2.9914e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,26,12:0,0,15,23 chr2 209036779 . G . PASS END=209036784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:35,0 chr2 209036785 . T . PASS END=209036785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1188:0,75,255:30,0 chr2 209036786 . G . PASS END=209036799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1294:0,92,255:34,0 chr2 209045469 . C . PASS END=209045540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:61:0,120,1800:0,165,255:40,0 chr2 209045942 . C . PASS END=209046029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,111,1665:0,131,255:40,0 chr2 209047689 . A . PASS END=209047771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:39:0,96,1440:0,101,255:40,0 chr2 209049675 . C . PASS END=209049756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,163,255:40,0 chr2 209051670 . A . PASS END=209051710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,142,255:40,0 chr2 209054677 . C . PASS END=209054746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:35:0,93,1161:0,94,255:40,0 chr2 209101803 . T . PASS END=209101860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,145,255:40,0 chr2 209101861 . T . PASS END=209101881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:84:59:0,84,1260:0,133,255:40,0 chr2 209101882 . G . PASS END=209101889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:60:50:0,60,900:0,95,255:26,0 chr2 209101890 . C . PASS END=209101890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:45:50:0,45,675:0,111,255:15,0 chr2 209101891 . A . PASS END=209101891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:39:49:0,39,585:0,108,255:13,0 chr2 209101892 . C . PASS END=209101893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:27:49:0,27,405:0,109,255:9,0 chr2 209103795 . T . PASS END=209103942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1215:0,90,255:40,0 chr2 209103943 . A . PASS END=209103945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,955:0,67,255:26,0 chr2 209103946 . C . PASS END=209103946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,951:0,43,255:26,0 chr2 209103947 . A . PASS END=209103950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 209103951 . A . PASS END=209103951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,972:0,73,255:28,0 chr2 209103952 . T . PASS END=209103952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 209103953 . G . PASS END=209103957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,958:0,71,255:26,0 chr2 209104587 . C . PASS END=209104598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,808:0,72,255:25,0 chr2 209104599 . T . PASS END=209104599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 209104600 . G . PASS END=209104605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr2 209104606 . C . PASS END=209104702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1057:0,80,255:40,0 chr2 209104703 . G . PASS END=209104711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1164:0,93,255:31,0 chr2 209104712 . C . PASS END=209104712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 209104713 . C . PASS END=209104716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 209104717 . A . PASS END=209104727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:29:0,60,1003:0,60,255:27,0 chr2 209106718 . C . PASS END=209106738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,120,1800:0,144,255:40,0 chr2 209106739 . G . PASS END=209106775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:55:0,120,1800:0,165,255:40,0 chr2 209106776 . G . PASS END=209106776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,8:66:36:66:0,36,1805:0,36,255:40,0 chr2 209106777 . C . PASS END=209106813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,177,255:40,0 chr2 209106814 . C . PASS END=209106855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:37:0,96,1440:0,104,255:40,0 chr2 209106856 . G . PASS END=209106867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:25:0,60,900:0,75,255:24,0 chr2 209106868 . G . PASS END=209106869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 209108151 . T . PASS END=209108328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:38:0,82,1305:0,82,255:40,0 chr2 209110043 . C . PASS END=209110125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:52:0,120,1800:0,139,255:40,0 chr2 209110126 . A . PASS END=209110148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:67:0,117,1755:0,154,255:40,0 chr2 209113093 . T . PASS END=209113099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:13:0,30,450:0,39,255:13,0 chr2 209113100 . C . PASS END=209113104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 209113105 . A . PASS END=209113121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:23,0 chr2 209113122 . T . PASS END=209113122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 209113123 . G . PASS END=209113126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr2 209113127 . G . PASS END=209113136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 209113137 . A . PASS END=209113137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 209113138 . T . PASS END=209113138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:27,0 chr2 209113139 . C . PASS END=209113156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1009:0,84,255:29,0 chr2 209113157 . A . PASS END=209113157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 209113158 . T . PASS END=209113215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1210:0,87,255:36,0 chr2 209113216 . G . PASS END=209113216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:33,0 chr2 209113217 . C . PASS END=209113250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:37:0,81,1368:0,81,255:37,0 chr2 209113251 . A . PASS END=209113251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:41:0,67,1254:0,67,255:33,0 chr2 209113252 . C . PASS END=209113384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1260:0,91,255:40,0 chr2 209116154 . C . PASS END=209116275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:33:0,89,1301:0,89,255:40,0 chr2 209130992 . A . PASS END=209130992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,139:0,12,139:4,0 chr2 209130996 . A . PASS END=209130996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,147:0,12,147:4,0 chr2 209136244 . A . PASS END=209136254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:24,0 chr2 209136255 . T . PASS END=209136387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:33:0,93,1174:0,98,255:40,0 chr2 209136388 . T . PASS END=209136388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1434:0,74,255:40,0 chr2 209136389 . T . PASS END=209136411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,114,1710:0,122,255:40,0 chr2 209136412 . A . PASS END=209136412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1457:0,71,255:34,0 chr2 209136413 . A . PASS END=209136415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:93:41:0,93,1395:0,123,255:31,0 chr2 209138308 . A . PASS END=209138320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1241:0,86,255:34,0 chr2 209138321 . A . PASS END=209138321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:32,0 chr2 209138322 . G . PASS END=209138446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:85:37:0,85,1380:0,85,255:40,0 chr2 209138447 . T . PASS END=209138447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1565:0,74,255:36,0 chr2 209138448 . T . PASS END=209138458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:42:0,90,1350:0,122,255:38,0 chr2 209138742 . C . PASS END=209138777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:82:54:0,82,1498:0,82,255:40,0 chr2 209141436 . A . PASS END=209141554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,105,1561:0,115,255:40,0 chr2 209142261 . G . PASS END=209142432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:93:38:0,93,1395:0,93,255:40,1 chr2 209150450 . G . PASS END=209150657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,2:70:82:43:0,82,1350:0,82,255:40,0 chr2 209153453 . T . PASS END=209153477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:86:32:0,86,1097:0,86,255:40,0 chr2 209153478 . A . PASS END=209153478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1380:0,79,255:40,0 chr2 209153479 . C . PASS END=209153542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,112,1452:0,112,255:40,0 chr2 209163365 . A . PASS END=209163503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:32:0,80,1133:0,80,255:40,0 chr2 209165661 . G . PASS END=209165818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:81:40:0,81,1215:0,113,255:40,0 chr2 209166966 . G . PASS END=209167058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:36:0,96,1440:0,107,255:40,0 chr2 209167059 . G . PASS END=209167077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:60:24:0,60,900:0,69,255:23,2 chr2 209167081 . C . PASS END=209167081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 209168895 . A . PASS END=209168902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:17,0 chr2 209168903 . A . PASS END=209168903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 209168904 . T . PASS END=209168914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,585:0,54,255:18,0 chr2 209168915 . G . PASS END=209168922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,729:0,60,255:24,0 chr2 209168923 . C . PASS END=209168923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 209168924 . C . PASS END=209168934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,922:0,72,255:26,0 chr2 209168935 . C . PASS END=209168952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:30,0 chr2 209168953 . G . PASS END=209168953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:29,0 chr2 209168954 . A . PASS END=209168998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1119:0,80,255:32,0 chr2 209168999 . T . PASS END=209169017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,65,255:26,0 chr2 209169018 . G . PASS END=209169018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 209169019 . A . PASS END=209169025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 209169026 . T . PASS END=209169026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,696:0,11,255:20,0 chr2 209169027 . G . PASS END=209169032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 209169033 . A . PASS END=209169033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr2 209169034 . A . PASS END=209169042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 209169570 . A . PASS END=209169578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 209169579 . G . PASS END=209169748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:29:0,83,1080:0,83,255:40,0 chr2 209176960 . A . PASS END=209177019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,113,1535:0,113,255:40,0 chr2 209179018 . A . PASS END=209179131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:38:0,87,1305:0,98,255:40,0 chr2 209179132 . C . PASS END=209179143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:63:26:0,63,945:0,78,255:26,0 chr2 209179144 . T . PASS END=209179147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:18,0 chr2 209179917 . T . PASS END=209179919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr2 209179920 . A . PASS END=209179933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:25,0 chr2 209179934 . A . PASS END=209179937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 209179938 . G . PASS END=209179938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 209179939 . A G, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.291;ReadPosRankSum=1.894;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,18,0:0.643,0.000:28:3,8,0:7,10,0:46:85,0,45,615,358,973:255,0,255:10,0:5.0000e+01,1.0976e-04,4.8167e+01,4.5000e+02,3.9244e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,3,9,9:6,4,7,11 chr2 209179940 . T . PASS END=209179956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:28:0,83,1003:0,83,255:34,0 chr2 209179957 . T . PASS END=209179957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1204:0,71,255:33,0 chr2 209179958 . T . PASS END=209179976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:34:0,102,1302:0,102,255:40,0 chr2 209179977 . G . PASS END=209180085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:34:0,90,1280:0,92,255:40,0 chr2 209180086 . C . PASS END=209180097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:28:0,63,945:0,80,255:26,0 chr2 209182591 . A . PASS END=209182630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:61:0,120,1800:0,169,255:40,0 chr2 209182631 . G . PASS END=209182665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:67:0,120,1800:0,197,255:40,0 chr2 209184976 . A . PASS END=209184979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,112,1800:0,112,255:40,0 chr2 209184980 . G A, 192.20 PASS DP=49;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,23,0:0,26,0:142:230,145,0,1737,145,1737:255,150,0:0,0:1.9220e+02,1.4220e+02,0.0000e+00,4.5000e+02,1.7697e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,15:0,0,28,21 chr2 209184981 . T . PASS END=209184998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:50:0,112,1800:0,112,255:40,0 chr2 209184999 . C T, 208.59 PASS DP=54;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,54,0:1.000,0.000:54:0,24,0:0,30,0:159:246,162,0,2020,162,2020:255,165,0:0,0:2.0859e+02,1.5859e+02,0.0000e+00,4.5000e+02,1.9336e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,22:0,0,26,28 chr2 209185000 . A . PASS END=209185036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:55:0,120,1800:0,149,255:40,0 chr2 209185037 . A . PASS END=209185083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:50:0,120,1800:0,133,255:40,0 chr2 209188866 . G . PASS END=209188998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:33:0,81,1215:0,89,255:40,0 chr2 209188999 . T . PASS END=209189006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:28:0,69,1035:0,76,255:25,0 chr2 209189635 . C . PASS END=209189637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 209189638 . G . PASS END=209189647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,892:0,69,255:25,0 chr2 209189648 . G . PASS END=209189652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:31,0 chr2 209189653 . A . PASS END=209189653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 209189654 . G . PASS END=209189761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:92:33:0,92,1263:0,92,255:40,0 chr2 209189771 . C . PASS END=209189771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 209189994 . A . PASS END=209190004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:32:0,90,1205:0,91,255:33,0 chr2 209190005 . A . PASS END=209190005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:32,0 chr2 209190006 . C . PASS END=209190292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:33:0,90,1350:0,99,255:40,0 chr2 209190293 . G . PASS END=209190329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,120,1800:0,132,255:40,0 chr2 209190330 . T C, 199.58 PASS DP=51;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,27,0:0,24,0:150:237,153,0,1917,153,1917:255,153,0:0,0:1.9958e+02,1.4958e+02,0.0000e+00,4.5000e+02,1.8435e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,20:0,0,23,28 chr2 209190331 . G . PASS END=209190367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:48:0,109,1800:0,109,255:40,0 chr2 209190368 . A . PASS END=209190479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,106,1578:0,106,255:40,0 chr2 209190480 . T . PASS END=209190518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:36:0,85,1329:0,85,255:40,0 chr2 209190519 . A T, 152.33 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,35,0:1.000,0.000:35:0,13,0:0,22,0:102:190,105,0,1341,105,1341:255,108,0:0,0:1.5233e+02,1.0233e+02,0.0000e+00,4.5000e+02,1.3710e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,19:0,0,16,19:209190519 chr2 209190520 . G . PASS END=209190527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1252:0,87,255:34,0 chr2 209190528 . C G, 162.52 PASS DP=39;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,39,0:1.000,0.000:39:0,13,0:0,26,0:113:200,116,0,1361,116,1361:255,120,0:0,0:1.6252e+02,1.1252e+02,0.0000e+00,4.5000e+02,1.4729e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,20:0,0,15,24:209190519 chr2 209190529 . T . PASS END=209190538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:33:0,89,1255:0,89,255:32,0 chr2 209190539 . A . PASS END=209190539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1009:0,66,255:28,0 chr2 209190540 . C . PASS END=209190566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:34:0,84,1195:0,88,255:35,0 chr2 209190567 . A . PASS END=209190567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:32,0 chr2 209190568 . G . PASS END=209190594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:32:0,87,1227:0,91,255:36,0 chr2 209190595 . G . PASS END=209190631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:35:0,96,1360:0,103,255:40,0 chr2 209190632 . T G, 47.41 PASS DP=41;MQ=250.00;MQRankSum=5.385;ReadPosRankSum=4.274;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,17,0:0.415,0.000:41:9,6,0:15,11,0:46:82,0,50,579,829,1408:255,0,255:23,0:4.7412e+01,1.0044e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,11,10,7:18,6,7,10 chr2 209190633 . C . PASS END=209190648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,120,1800:0,123,255:40,0 chr2 209190649 . A G, 44.25 PASS DP=43;MQ=250.00;MQRankSum=5.415;ReadPosRankSum=4.761;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,16,0:0.372,0.000:43:10,6,0:17,10,0:44:79,0,50,564,966,1530:255,0,255:27,0:4.4248e+01,1.8509e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:15,12,7,9:18,9,7,9 chr2 209190650 . A . PASS END=209190686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,105,1575:0,122,255:40,0 chr2 209190687 . A . PASS END=209191044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:36:0,87,1271:0,87,255:40,0 chr2 209191045 . T . PASS END=209191081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:99:50:0,117,1654:0,117,255:40,0 chr2 209191082 . C A, 233.14 PASS DP=62;MQ=249.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,32,0:0,30,0:183:271,186,0,2357,186,2357:255,189,0:0,0:2.3314e+02,1.8314e+02,0.0000e+00,4.5000e+02,2.1791e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,28,34:0,0,34,28 chr2 209191083 . A . PASS END=209191098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,142,255:40,0 chr2 209191099 . T C, 232.68 PASS DP=62;MQ=249.92;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,62,0:1.000,0.000:62:0,34,0:0,28,0:183:270,186,0,2333,186,2333:255,189,0:0,0:2.3268e+02,1.8268e+02,0.0000e+00,4.5000e+02,2.1745e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,37:0,0,35,27 chr2 209191100 . G . PASS END=209191136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:51:0,117,1755:0,147,255:40,0 chr2 209191137 . C . PASS END=209191154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1260:0,105,255:38,0 chr2 209192904 . G . PASS END=209193004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,130,255:40,0 chr2 209194566 . G . PASS END=209194637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:70:0,120,1800:0,175,255:40,0 chr2 209195247 . G . PASS END=209195415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:31:0,84,1220:0,84,255:40,0 chr2 209195416 . C . PASS END=209195418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:69:38:0,69,1035:0,97,255:24,0 chr2 209198039 . G . PASS END=209198040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,715:0,50,255:21,0 chr2 209198041 . A . PASS END=209198048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,69,255:26,0 chr2 209198049 . T . PASS END=209198055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 209198056 . T . PASS END=209198056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,975:0,76,255:28,0 chr2 209198057 . C . PASS END=209198160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1208:0,83,255:40,0 chr2 209198161 . C . PASS END=209198173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr2 209198174 . T . PASS END=209198174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,760:0,45,255:21,0 chr2 209198175 . A . PASS END=209198186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:23,0 chr2 209198187 . T . PASS END=209198191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 209198192 . T . PASS END=209198192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,792:0,38,255:17,0 chr2 209198193 . A . PASS END=209198206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr2 209198207 . G . PASS END=209198207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 209198208 . C . PASS END=209198211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 209198212 . T . PASS END=209198217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:13,0 chr2 209200030 . T . PASS END=209200143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,107,1641:0,107,255:40,0 chr2 209200517 . A . PASS END=209200625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,1:103:99:69:0,120,1800:0,182,255:40,0 chr2 209200770 . A . PASS END=209200924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:42:0,105,1575:0,113,255:40,0 chr2 209201562 . G . PASS END=209201637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:85:33:0,85,1213:0,85,255:40,0 chr2 209201638 . G . PASS END=209201638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:36,0 chr2 209201639 . G . PASS END=209201652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:84:38:0,84,1260:0,84,255:38,0 chr2 209203232 . A . PASS END=209203292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:65:0,120,1800:0,178,255:40,0 chr2 209204142 . A . PASS END=209204150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:26,0 chr2 209204151 . T . PASS END=209204279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:28:0,81,1028:0,84,255:40,0 chr2 209204735 . A . PASS END=209204855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:47:0,120,1800:0,124,255:40,0 chr2 209207278 . T . PASS END=209207373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:51:0,120,1800:0,153,255:40,0 chr2 209209835 . T . PASS END=209209864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,124,255:40,0 chr2 209209865 . A . PASS END=209209918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:53:0,120,1800:0,128,255:40,1 chr2 209210774 . T . PASS END=209210871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:90:34:0,90,1221:0,90,255:40,0 chr2 209212583 . C . PASS END=209212591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,442:0,39,255:13,0 chr2 209212592 . C . PASS END=209212594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 209212595 . C . PASS END=209212595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 209212596 . T . PASS END=209212599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 209212600 . A . PASS END=209212600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 209212601 . T . PASS END=209212603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 209212604 . T . PASS END=209212604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 209212605 . G . PASS END=209212609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 209212610 . T . PASS END=209212618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 209212619 . G . PASS END=209212619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 209212620 . G . PASS END=209212620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 209212621 . A . PASS END=209212626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr2 209212627 . G . PASS END=209212627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 209212628 . G . PASS END=209212632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,869:0,62,255:26,0 chr2 209212633 . A . PASS END=209212645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 209212646 . C . PASS END=209212647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 209212648 . T . PASS END=209212649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 209212650 . C . PASS END=209212650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 209212651 . C . PASS END=209212660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,979:0,87,255:29,0 chr2 209212661 . A . PASS END=209212661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,902:0,70,255:28,0 chr2 209212662 . G . PASS END=209212662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 209212663 . A . PASS END=209212663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:29,0 chr2 209212664 . C . PASS END=209212669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:32,0 chr2 209212670 . G . PASS END=209212706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1225:0,86,255:34,0 chr2 209212707 . G A, 50.00 PASS DP=34;MQ=249.30;MQRankSum=4.321;ReadPosRankSum=4.501;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,18,0:0.545,0.000:33:9,8,0:6,10,0:48:85,0,49,644,508,1152:255,0,255:13,0:5.0000e+01,6.8857e-05,5.2322e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,10,8:6,9,10,8 chr2 209212708 . G . PASS END=209212735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:32,0 chr2 209212736 . T . PASS END=209212736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 209212737 . T . PASS END=209212744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 209212745 . A . PASS END=209212746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 209212747 . G . PASS END=209212747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 209214748 . A . PASS END=209214769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:55:0,120,1800:0,148,255:40,0 chr2 209214770 . A G, 247.70 PASS DP=67;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,67,0:1.000,0.000:67:0,35,0:0,32,0:198:285,201,0,385,385,385:255,201,0:0,0:2.4770e+02,1.9770e+02,0.0000e+00,3.8247e+02,4.1724e+02,3.8548e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,43,24:0,0,33,34 chr2 209214771 . C . PASS END=209214807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,162,255:40,0 chr2 209215495 . A . PASS END=209215495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 209215496 . A . PASS END=209215497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:32,0 chr2 209215498 . T . PASS END=209215498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:31,0 chr2 209215499 . T . PASS END=209215533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1163:0,80,255:40,0 chr2 209215534 . A . PASS END=209215570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:96:40:0,96,1440:0,99,255:40,0 chr2 209215571 . T C, 46.51 PASS DP=45;MQ=249.83;MQRankSum=5.618;ReadPosRankSum=1.772;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:27,18,0:0.400,0.000:45:10,7,0:17,11,0:46:81,0,50,643,940,1583:255,0,255:26,0:4.6506e+01,1.1882e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,14,8,10:14,13,11,7 chr2 209215572 . C . PASS END=209215585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1620:0,116,255:40,0 chr2 209215586 . A G, 178.51 PASS DP=44;MQ=249.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,15,0:0,29,0:129:216,132,0,1640,132,1640:255,132,0:0,0:1.7851e+02,1.2851e+02,0.0000e+00,4.5000e+02,1.6328e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,26:0,0,25,19 chr2 209215587 . G . PASS END=209215623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:40:0,90,1366:0,90,255:40,0 chr2 209215624 . G . PASS END=209215635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:96:38:0,96,1440:0,98,255:36,0 chr2 209215636 . G . PASS END=209215636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:32,0 chr2 209215637 . A . PASS END=209215657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1145:0,80,255:32,0 chr2 209215658 . C . PASS END=209215667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:27:0,66,990:0,81,255:25,0 chr2 209215668 . G . PASS END=209215671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 209216076 . A . PASS END=209216179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:84:38:0,84,1260:0,102,255:40,0 chr2 209217367 . C . PASS END=209217367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1263:0,86,255:31,0 chr2 209217374 . T . PASS END=209217374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 209217378 . A . PASS END=209217506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:41:0,105,1715:0,105,255:40,0 chr2 209218620 . A . PASS END=209218620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 209218622 . G . PASS END=209218822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:28:0,82,1003:0,82,255:40,0 chr2 209218823 . G . PASS END=209218833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:29:0,75,1125:0,80,255:26,0 chr2 209218834 . G . PASS END=209218842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 209218843 . G . PASS END=209218860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr2 209218861 . T . PASS END=209218874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,737:0,47,255:19,0 chr2 209218875 . G . PASS END=209218875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 209218876 . A . PASS END=209218877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 209218878 . T . PASS END=209218883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 209219295 . A . PASS END=209219369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:83:0,120,1800:0,204,255:40,0 chr2 209219914 . G . PASS END=209220029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:53:0,120,1800:0,141,255:40,0 chr2 209220269 . C . PASS END=209220269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 209220521 . T . PASS END=209220521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 209220547 . C . PASS END=209220548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 209220581 . T . PASS END=209220581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 209220644 . T . PASS END=209220644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,105,1575:0,120,255:35,0 chr2 209220749 . A . PASS END=209220749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 209220758 . T . PASS END=209220758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 209220795 . G . PASS END=209220795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1227:0,99,255:33,0 chr2 209220806 . A . PASS END=209220806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1351:0,108,255:36,0 chr2 209220827 . A . PASS END=209220827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,105,1575:0,114,255:35,0 chr2 209220843 . T . PASS END=209220843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:96:38:0,96,1440:0,98,255:31,0 chr2 209220897 . T . PASS END=209220897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 209220997 . G . PASS END=209220997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 209221030 . G . PASS END=209221030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 209221387 . C . PASS END=209221387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 209221411 . T . PASS END=209221411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:72:0,120,1800:0,216,255:40,0 chr2 209221458 . G . PASS END=209221458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:70:0,120,1800:0,194,255:40,0 chr2 209221581 . G . PASS END=209221581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 209221650 . A . PASS END=209221650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 209221653 . A . PASS END=209221653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:51:0,120,1800:0,137,255:40,0 chr2 209221665 . A . PASS END=209221665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 209221855 . A . PASS END=209221855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 209222056 . C . PASS END=209222056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,244,255:40,0 chr2 209222059 . G . PASS END=209222059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:81:0,120,1800:0,243,255:40,0 chr2 209222247 . A . PASS END=209222247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:64:0,120,1800:0,192,255:40,0 chr2 209222267 . A . PASS END=209222267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:65:0,120,1800:0,195,255:40,0 chr2 209222524 . A . PASS END=209222524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 209222549 . T . PASS END=209222549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 209222577 . C . PASS END=209222577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 209222768 . A . PASS END=209222768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 209222792 . C . PASS END=209222792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 209222890 . C . PASS END=209222890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 209223056 . A . PASS END=209223056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,120,1800:0,124,255:39,0 chr2 209223103 . A . PASS END=209223103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:18:51:0,18,270:0,136,255:5,0 chr2 209223123 . G GTTT,GTT,GTTTT,T, 195.89 PASS DP=48;MQ=248.27;FractionInformativeReads=0.979 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/2:0,22,18,7,0,0:0.468,0.383,0.149,0.000,0.000:47:0,8,8,2,0,0:0,14,10,5,0,0:19:226,161,31,266,0,65,384,88,104,153,1007,174,274,416,239,337,80,135,214,350,207:255,0,31:0,66:1.9589e+02,1.4589e+02,1.9304e+01,2.5078e+02,5.1305e-02,5.3051e+01,3.6892e+02,8.8087e+01,1.0409e+02,1.4109e+02,4.5000e+02,1.9373e+02,2.9375e+02,4.3531e+02,2.4673e+02,3.4209e+02,9.9527e+01,1.5480e+02,2.3348e+02,3.8942e+02,2.1491e+02:0.00,15.00,18.00,15.00,30.00,18.00,15.00,30.00,30.00,18.00,34.77,49.77,49.77,49.77,37.77,34.77,49.77,49.77,49.77,69.54,37.77:0,0,25,22:0,0,26,21 chr2 209223126 . T . PASS END=209223126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 209223215 . A . PASS END=209223215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 209223358 . G . PASS END=209223358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 209271769 . A . PASS END=209271769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,954:0,67,255:26,0 chr2 209271770 . T . PASS END=209271771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 209271772 . G . PASS END=209271772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 209271773 . C . PASS END=209271778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 209271779 . T . PASS END=209271779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 209271780 . G . PASS END=209271782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 209271783 . G . PASS END=209271783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,992:0,54,255:27,0 chr2 209271784 . G . PASS END=209271793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 209271794 . A . PASS END=209271815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1117:0,80,255:33,0 chr2 209271816 . C . PASS END=209271816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:31,0 chr2 209271817 . G . PASS END=209271826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1224:0,83,255:32,0 chr2 209271827 . T . PASS END=209271827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:30,0 chr2 209271828 . C . PASS END=209271834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:31,0 chr2 209271835 . A . PASS END=209271835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr2 209271836 . G . PASS END=209271840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 209271841 . C . PASS END=209271842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 209271843 . G . PASS END=209271843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 209292926 . C . PASS END=209293028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:87:37:0,87,1305:0,98,255:40,0 chr2 209302262 . A . PASS END=209302372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:44:0,114,1710:0,121,255:40,0 chr2 209302485 . G . PASS END=209302606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:35:0,84,1260:0,93,255:40,2 chr2 209307089 . C . PASS END=209307186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:54:0,120,1800:0,145,255:40,0 chr2 209308073 . A . PASS END=209308073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 209308074 . C . PASS END=209308078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr2 209308079 . G . PASS END=209308262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:27:0,81,986:0,81,255:40,0 chr2 209309459 . A . PASS END=209309612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:93:44:0,93,1395:0,108,255:40,0 chr2 209315474 . G . PASS END=209315492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1072:0,87,255:35,0 chr2 209315493 . T . PASS END=209315524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1296:0,105,255:37,0 chr2 209315525 . C . PASS END=209315534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:28:0,71,1061:0,71,255:25,0 chr2 209324620 . G . PASS END=209324686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,123,255:40,0 chr2 209345795 . C . PASS END=209345889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:38:0,90,1380:0,90,255:40,0 chr2 209353737 . G . PASS END=209353757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,884:0,61,255:26,0 chr2 209353758 . G . PASS END=209353762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:29:0,83,1041:0,83,255:33,0 chr2 209353763 . T . PASS END=209353793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:33:0,91,1197:0,91,255:38,0 chr2 209353794 . G . PASS END=209353794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1364:0,76,255:37,0 chr2 209353795 . T . PASS END=209353799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:38:0,98,1373:0,98,255:38,0 chr2 209353800 . A G, 50.00 PASS DP=38;MQ=250.00;MQRankSum=5.255;ReadPosRankSum=1.401;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,19,0:0.500,0.000:38:8,9,0:11,10,0:47:85,0,47,185,185,185:255,0,255:19,0:5.0000e+01,8.6978e-05,5.0000e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:12,7,10,9:9,10,8,11 chr2 209353801 . T . PASS END=209353837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,111,1466:0,117,255:40,0 chr2 209353838 . T . PASS END=209353869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:29:0,81,1157:0,82,255:34,0 chr2 209353870 . T . PASS END=209353870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 209353871 . T . PASS END=209353871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:23,0 chr2 209353872 . T . PASS END=209353875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:25,0 chr2 209355364 . G . PASS END=209355405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,112,1800:0,112,255:40,0 chr2 209357989 . G . PASS END=209357989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 209357990 . T . PASS END=209357990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 209357991 . T . PASS END=209357995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 209357996 . C . PASS END=209358004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:23,0 chr2 209358005 . A . PASS END=209358005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:11:24:0,11,791:0,11,255:22,0 chr2 209358006 . G . PASS END=209358026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,925:0,62,255:26,0 chr2 209358027 . C T, 49.92 PASS DP=27;MQ=250.00;MQRankSum=4.392;ReadPosRankSum=2.208;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,13,0:0.481,0.000:27:6,8,0:8,5,0:48:85,0,50,449,499,947:255,0,255:14,0:4.9920e+01,6.6010e-05,5.3000e+01,4.4853e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,4,5,8:8,6,4,9 chr2 209358028 . C . PASS END=209358028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 209358029 . T . PASS END=209358063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr2 209358064 . A . PASS END=209358064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 209358065 . G . PASS END=209358132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,62,255:26,0 chr2 209358133 . A . PASS END=209358133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 209358134 . G . PASS END=209358138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 209358139 . C . PASS END=209358141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 209358142 . A . PASS END=209358142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,937:0,42,255:26,0 chr2 209358143 . T . PASS END=209358144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 209358145 . G . PASS END=209358155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 209358156 . T . PASS END=209358156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 209358157 . G . PASS END=209358192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1056:0,87,255:30,0 chr2 209358193 . A . PASS END=209358193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr2 209358194 . G . PASS END=209358194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 209358195 . C . PASS END=209358245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1156:0,83,255:37,0 chr2 209358246 . G . PASS END=209358246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1282:0,72,255:34,0 chr2 209358247 . C . PASS END=209358248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 209358249 . A . PASS END=209358249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:33,0 chr2 209358250 . C . PASS END=209358354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:32:0,86,1225:0,86,255:40,0 chr2 209358355 . T . PASS END=209358355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:29,0 chr2 209358356 . G . PASS END=209358365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:30,0 chr2 209358366 . A . PASS END=209358366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 209358367 . A . PASS END=209358374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 209358375 . T . PASS END=209358375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 209358376 . G . PASS END=209358384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 209436738 . A . PASS END=209436738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:23,0 chr2 209436739 . T . PASS END=209436770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:24:0,65,933:0,65,255:26,0 chr2 209436771 . G . PASS END=209436774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:29,0 chr2 209436775 . C . PASS END=209436775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 209436776 . A . PASS END=209436777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 209436778 . C . PASS END=209436790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:60:22:0,60,900:0,66,255:21,0 chr2 209436791 . A . PASS END=209436791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:20,0 chr2 209436792 . T . PASS END=209436794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 210517895 . A . PASS END=210517896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 210517897 . G . PASS END=210517897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,566:0,20,255:15,0 chr2 210517898 . G . PASS END=210517919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:18,0 chr2 210517920 . C . PASS END=210517920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,576:0,15,255:17,0 chr2 210517921 . A . PASS END=210517929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,670:0,54,255:19,0 chr2 210517930 . T . PASS END=210517950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,845:0,66,255:26,0 chr2 210517951 . A . PASS END=210517957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 210517958 . G . PASS END=210517958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 210517959 . C . PASS END=210518156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:30:0,84,1197:0,90,255:40,0 chr2 210543296 . A . PASS END=210543409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:40:0,116,1551:0,116,255:40,0 chr2 210545474 . C . PASS END=210545551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:59:0,120,1800:0,155,255:40,0 chr2 210552443 . A . PASS END=210552461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 210552462 . A . PASS END=210552484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 210552485 . C . PASS END=210552507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 210552508 . G . PASS END=210552579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,553:0,45,255:16,0 chr2 210552580 . G . PASS END=210552584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 210552585 . G . PASS END=210552595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:14,0 chr2 210552596 . A . PASS END=210552607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 210552608 . G . PASS END=210552637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 210552638 . C . PASS END=210552647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 210552648 . A . PASS END=210552652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr2 210552653 . A . PASS END=210552658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:18:11:0,18,270:0,33,255:6,0 chr2 210552659 . C . PASS END=210552660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 210552661 . G . PASS END=210552672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,225:6,0 chr2 210552673 . G . PASS END=210552685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:3:0,9,116:0,9,116:3,0 chr2 210555327 . A . PASS END=210555352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,825:0,61,255:26,0 chr2 210555353 . G . PASS END=210555357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 210555358 . G . PASS END=210555360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,942:0,70,255:26,0 chr2 210555361 . A . PASS END=210555361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:4:29:0,4,692:0,4,255:22,0 chr2 210555362 . G . PASS END=210555363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,939:0,67,255:26,0 chr2 210555364 . G . PASS END=210555369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr2 210555370 . T . PASS END=210555372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 210555373 . T . PASS END=210555373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr2 210555374 . G . PASS END=210555380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 210555381 . C . PASS END=210555381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 210555382 . T . PASS END=210555382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,953:0,65,255:26,0 chr2 210555383 . G . PASS END=210555391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:29,0 chr2 210555392 . T . PASS END=210555392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 210555393 . G . PASS END=210555395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 210555396 . G . PASS END=210555396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1077:0,46,255:28,0 chr2 210555397 . G . PASS END=210555406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 210555407 . T . PASS END=210555407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr2 210555408 . C . PASS END=210555415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 210555416 . C . PASS END=210555420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 210555421 . C . PASS END=210555421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 210555422 . A . PASS END=210555445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,81,255:26,0 chr2 210555446 . G . PASS END=210555447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:24:0,57,855:0,72,255:19,0 chr2 210555448 . G . PASS END=210555461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,807:0,66,255:22,0 chr2 210555462 . C . PASS END=210555462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 210555463 . C . PASS END=210555463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 210555464 . C . PASS END=210555464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 210555465 . A . PASS END=210555465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 210555466 . A . PASS END=210555466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 210555467 . A . PASS END=210555498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,815:0,64,255:24,0 chr2 210555499 . C . PASS END=210555499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 210555500 . C . PASS END=210555503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 210555504 . A . PASS END=210555504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 210555505 . T . PASS END=210555506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 210555507 . A . PASS END=210555507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 210555508 . G . PASS END=210555517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 210555518 . A . PASS END=210555518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 210555519 . A . PASS END=210555519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 210555520 . A . PASS END=210555543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:16:0,48,568:0,48,255:18,0 chr2 210555544 . A . PASS END=210555544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 210555545 . G . PASS END=210555545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 210555546 . T . PASS END=210555546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 210555547 . A . PASS END=210555558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:16,0 chr2 210555559 . C . PASS END=210555560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 210555561 . C . PASS END=210555562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:16:0,27,405:0,48,255:9,0 chr2 210555563 . G . PASS END=210555572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:30:11:0,30,418:0,32,255:11,0 chr2 210557349 . A . PASS END=210557351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 210557352 . T . PASS END=210557385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:29,0 chr2 210557386 . A . PASS END=210557386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 210557387 . C . PASS END=210557709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:29:0,81,1102:0,87,255:40,0 chr2 210557710 . A . PASS END=210557710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:36,0 chr2 210557711 . G . PASS END=210557720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1242:0,94,255:36,0 chr2 210557721 . A . PASS END=210557721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1280:0,59,255:32,0 chr2 210557722 . T . PASS END=210557990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:37:0,83,1219:0,83,255:40,0 chr2 210557991 . T . PASS END=210557991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:44:44:0,44,1424:0,44,255:38,0 chr2 210557992 . T . PASS END=210557992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 210557993 . A . PASS END=210557993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1434:0,74,255:40,0 chr2 210557994 . A . PASS END=210557995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:43:0,90,1492:0,90,255:40,0 chr2 210557996 . A . PASS END=210557997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1466:0,74,255:40,0 chr2 210557998 . T . PASS END=210558012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:90:43:0,90,1462:0,90,255:40,0 chr2 210558013 . G . PASS END=210558013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:45:0,63,1526:0,63,255:38,0 chr2 210558014 . G . PASS END=210558022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:80:42:0,80,1474:0,80,255:40,0 chr2 210558023 . G . PASS END=210558023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1421:0,71,255:39,0 chr2 210558024 . A . PASS END=210558027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:42:0,87,1466:0,87,255:40,0 chr2 210558028 . A . PASS END=210558028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1389:0,74,255:39,0 chr2 210558029 . A . PASS END=210558276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:90:40:0,90,1354:0,90,255:40,0 chr2 210558277 . A . PASS END=210558277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:75:42:0,75,1125:0,75,255:35,0 chr2 210558278 . C . PASS END=210559105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:39:0,81,1396:0,81,255:40,2 chr2 210559106 . A . PASS END=210559106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:74:46:0,74,1504:0,74,255:37,0 chr2 210559107 . G . PASS END=210559564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:34:0,81,1159:0,81,255:40,0 chr2 210559565 . G . PASS END=210559565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:29,0 chr2 210559566 . G . PASS END=210560884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:80:35:0,80,1258:0,80,255:40,1 chr2 210560885 . T . PASS END=210560885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:74:36:0,74,1032:0,74,255:32,0 chr2 210560886 . T . PASS END=210560929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:36:0,82,1360:0,82,255:40,0 chr2 210560930 . G . PASS END=210560930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1394:0,79,255:39,0 chr2 210560931 . G . PASS END=210561069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:40:0,84,1260:0,111,255:40,0 chr2 210561070 . T . PASS END=210561070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:40:0,78,1170:0,120,255:26,0 chr2 210561071 . C . PASS END=210561071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:40:0,81,1215:0,120,255:27,0 chr2 210561072 . A . PASS END=210561074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:72:40:0,72,1080:0,120,255:25,0 chr2 210561266 . A . PASS END=210561472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:47:0,111,1730:0,111,255:40,0 chr2 210561641 . C . PASS END=210561775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:42:0,105,1575:0,110,255:40,0 chr2 210565001 . C . PASS END=210565062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:47:0,120,1800:0,128,255:40,0 chr2 210568711 . G . PASS END=210568719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:24:0,64,947:0,64,255:25,0 chr2 210568720 . G . PASS END=210568751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1109:0,87,255:30,0 chr2 210568752 . T . PASS END=210568752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:28,0 chr2 210568753 . G . PASS END=210568758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 210569174 . A . PASS END=210569197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,826:0,67,255:26,0 chr2 210569198 . G . PASS END=210569339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:28:0,84,988:0,84,255:40,0 chr2 210569340 . A . PASS END=210569344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:33:0,75,1125:0,83,255:26,0 chr2 210570304 . G . PASS END=210570304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 210570305 . A . PASS END=210570305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 210570306 . C . PASS END=210570445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:31:0,81,1157:0,86,255:40,0 chr2 210570446 . C . PASS END=210570451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,90,255:25,0 chr2 210574638 . G . PASS END=210574648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,947:0,87,255:29,0 chr2 210574649 . A . PASS END=210574649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,801:0,37,255:24,0 chr2 210574650 . T . PASS END=210574655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1069:0,71,255:26,0 chr2 210574656 . G . PASS END=210574742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1156:0,89,255:37,0 chr2 210574743 . C . PASS END=210574743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:33,0 chr2 210574744 . A . PASS END=210574960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:38:0,93,1485:0,93,255:40,0 chr2 210574961 . C . PASS END=210574975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:75:26:0,75,954:0,78,255:26,0 chr2 210574976 . C . PASS END=210574978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 210575388 . G . PASS END=210575399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:48:0,120,1799:0,120,255:40,0 chr2 210588319 . G . PASS END=210588411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,111,1713:0,111,255:40,0 chr2 210590433 . G . PASS END=210590514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:41:0,105,1466:0,105,255:40,0 chr2 210594574 . G . PASS END=210594577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:69:0,120,1800:0,197,255:40,0 chr2 210594578 . C . PASS END=210594673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:53:0,108,1620:0,145,255:40,0 chr2 210594674 . T . PASS END=210594684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:47:0,81,1215:0,125,255:35,0 chr2 210594685 . A . PASS END=210594686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:75:47:0,75,1125:0,141,255:25,0 chr2 210594906 . A . PASS END=210595102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:34:0,81,1215:0,90,255:40,0 chr2 210595103 . C . PASS END=210595111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:30:0,60,900:0,79,255:26,0 chr2 210595112 . G . PASS END=210595121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:51:23:0,51,765:0,53,255:19,0 chr2 210636797 . A . PASS END=210636798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 210636799 . G . PASS END=210636799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 210636800 . G . PASS END=210636801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 210636802 . G . PASS END=210636802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 210636803 . A . PASS END=210636803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:19,0 chr2 210636804 . A . PASS END=210636812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,862:0,63,255:24,0 chr2 210636813 . G . PASS END=210636813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,762:0,33,255:23,0 chr2 210636814 . C . PASS END=210636824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:25,0 chr2 210636825 . A . PASS END=210636825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 210636826 . G . PASS END=210636849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,886:0,75,255:25,0 chr2 210636850 . C . PASS END=210636850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 210636851 . C . PASS END=210636875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:25,0 chr2 210636876 . G . PASS END=210636888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,652:0,43,255:19,0 chr2 210637818 . T . PASS END=210637866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:97:0,120,1800:0,248,255:40,0 chr2 210640613 . T . PASS END=210640613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 210640614 . C . PASS END=210640623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,840:0,75,255:25,0 chr2 210640624 . A . PASS END=210640641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr2 210640642 . G . PASS END=210640644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 210640645 . G . PASS END=210640647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 210640648 . T . PASS END=210640650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 210640651 . C . PASS END=210640721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:32:0,84,1260:0,94,255:40,0 chr2 210640722 . A . PASS END=210640722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1233:0,72,255:32,0 chr2 210640723 . T . PASS END=210640750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1180:0,83,255:34,0 chr2 210640751 . T . PASS END=210640753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 210640754 . A . PASS END=210640754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr2 210640755 . A . PASS END=210640756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 210640757 . C . PASS END=210640760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 210640761 . A . PASS END=210640769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,963:0,67,255:24,0 chr2 210641982 . G . PASS END=210641989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr2 210641990 . G . PASS END=210641990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1007:0,71,255:27,0 chr2 210641991 . A . PASS END=210642015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 210642016 . G . PASS END=210642016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 210642017 . C . PASS END=210642021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1260:0,90,255:32,0 chr2 210642022 . T . PASS END=210642022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1149:0,72,255:29,0 chr2 210642023 . C . PASS END=210642283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:84:33:0,84,1257:0,89,255:40,1 chr2 210650789 . G . PASS END=210650795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,914:0,72,255:26,0 chr2 210650796 . G . PASS END=210650798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 210650799 . C . PASS END=210650799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 210650800 . T . PASS END=210650894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1031:0,81,255:37,0 chr2 210650895 . A . PASS END=210650895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 210650896 . T . PASS END=210650913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr2 210654256 . C . PASS END=210654329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:88:44:0,88,1451:0,88,255:40,0 chr2 210658444 . G . PASS END=210658446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 210658447 . C . PASS END=210658453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1163:0,87,255:30,0 chr2 210658454 . T . PASS END=210658454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:29,0 chr2 210658455 . G . PASS END=210658583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:82:30:0,82,1014:0,82,255:40,0 chr2 210678304 . G . PASS END=210678311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:18,0 chr2 210678312 . T . PASS END=210678312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 210678313 . T . PASS END=210678333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,623:0,54,255:19,0 chr2 210678334 . G . PASS END=210678345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,760:0,63,255:22,0 chr2 210678346 . C . PASS END=210678346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 210678347 . A . PASS END=210678348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 210678349 . C . PASS END=210678350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:50:22:0,50,759:0,50,255:21,0 chr2 210678351 . A . PASS END=210678377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,68,255:24,0 chr2 210678378 . T . PASS END=210678378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,911:0,45,255:23,0 chr2 210678379 . A . PASS END=210678392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,878:0,64,255:26,0 chr2 210678393 . G . PASS END=210678451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1117:0,83,255:33,0 chr2 210678452 . T . PASS END=210678452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1080:0,65,255:30,0 chr2 210678453 . T . PASS END=210678529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1178:0,83,255:33,0 chr2 210678530 . G . PASS END=210678538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:24,0 chr2 210678539 . T . PASS END=210678565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:15:0,45,521:0,45,255:18,0 chr2 210679981 . G . PASS END=210680105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:33:0,84,1156:0,85,255:40,0 chr2 210680106 . T . PASS END=210680106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1024:0,46,255:28,0 chr2 210680107 . T . PASS END=210680107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 210680108 . T . PASS END=210680108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:29,0 chr2 210680109 . T . PASS END=210680112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:29,0 chr2 210680113 . A . PASS END=210680115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 210681633 . T . PASS END=210681849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:29:0,84,1205:0,86,255:40,0 chr2 210682536 . G . PASS END=210682676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,105,1349:0,108,255:40,0 chr2 210683717 . T . PASS END=210683943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:93:36:0,93,1275:0,93,255:40,0 chr2 210683944 . A . PASS END=210683944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1318:0,78,255:31,0 chr2 210683945 . C . PASS END=210683964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1105:0,85,255:31,0 chr2 210683965 . A . PASS END=210683965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr2 210683966 . A . PASS END=210683969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 210683970 . A . PASS END=210683979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 210683980 . C . PASS END=210683980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 210683981 . T . PASS END=210683985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,846:0,64,255:26,0 chr2 210685035 . G . PASS END=210685285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:81:40:0,81,1320:0,81,255:40,0 chr2 210685286 . A . PASS END=210685286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:32:40:0,32,1209:0,32,255:28,0 chr2 210685287 . G . PASS END=210685287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:96:40:0,96,1440:0,104,255:31,0 chr2 210685288 . A . PASS END=210685288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:64:40:0,64,1230:0,64,255:31,0 chr2 210685289 . T . PASS END=210685294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:36,0 chr2 210685295 . A . PASS END=210685295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1132:0,77,255:33,0 chr2 210685296 . G . PASS END=210685299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1227:0,91,255:34,0 chr2 210685300 . A . PASS END=210685300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:60:36:0,60,1129:0,60,255:32,0 chr2 210685301 . A . PASS END=210685302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:34,0 chr2 210685303 . A . PASS END=210685304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1158:0,75,255:32,0 chr2 210685305 . G . PASS END=210685306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1189:0,88,255:32,0 chr2 210685307 . A . PASS END=210685307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1093:0,69,255:30,0 chr2 210685308 . G . PASS END=210685314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1129:0,85,255:32,0 chr2 210685315 . G . PASS END=210685315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1168:0,72,255:27,0 chr2 210685316 . A . PASS END=210685317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:30,0 chr2 210685318 . A . PASS END=210685324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:34:0,66,1080:0,66,255:25,0 chr2 210685325 . A . PASS END=210685325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,976:0,46,255:21,0 chr2 210685326 . G . PASS END=210685338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:70:26:0,70,948:0,70,255:26,0 chr2 210685339 . A . PASS END=210685339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:22,0 chr2 210685340 . T . PASS END=210685342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:23,0 chr2 210685343 . A . PASS END=210685351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,56,255:18,0 chr2 210685352 . T . PASS END=210685352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:17,0 chr2 210685353 . G . PASS END=210685370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:15:0,40,551:0,40,255:18,0 chr2 210685371 . C . PASS END=210685379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 210685380 . A . PASS END=210685380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:11,0 chr2 210685381 . A . PASS END=210685384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 210685385 . T . PASS END=210685385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:12,0 chr2 210685386 . G . PASS END=210685399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,413:0,36,255:12,0 chr2 210685400 . G . PASS END=210685403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 210690631 . G . PASS END=210690634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 210690635 . A . PASS END=210690777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:80:28:0,80,1084:0,80,255:40,0 chr2 210693956 . G . PASS END=210694103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:41:0,106,1466:0,106,255:40,0 chr2 210696167 . A . PASS END=210696171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:32,0 chr2 210696172 . G . PASS END=210696172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 210696173 . C . PASS END=210696183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1132:0,99,255:36,0 chr2 210696184 . A . PASS END=210696184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:35,0 chr2 210696185 . A . PASS END=210696285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:34:0,89,1302:0,89,255:40,0 chr2 210696286 . A . PASS END=210696286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:31,0 chr2 210696287 . C . PASS END=210696299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1149:0,82,255:31,0 chr2 210696300 . C . PASS END=210696305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:20,0 chr2 210696306 . T . PASS END=210696315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:54:21:0,54,810:0,63,255:19,0 chr2 210698726 . G . PASS END=210698730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,776:0,66,255:23,0 chr2 210698731 . G . PASS END=210698774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:84:29:0,84,1161:0,87,255:39,0 chr2 210698775 . A . PASS END=210698775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:38,0 chr2 210698776 . T . PASS END=210698855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:85:33:0,85,1172:0,85,255:39,0 chr2 210698856 . A . PASS END=210698856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 210698857 . G . PASS END=210698857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 210698858 . A . PASS END=210698858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1005:0,76,255:30,0 chr2 210698859 . A . PASS END=210698862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1130:0,93,255:31,0 chr2 210698863 . A . PASS END=210698863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 210698864 . C . PASS END=210698867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 210698868 . A . PASS END=210698868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:29,0 chr2 210698869 . A . PASS END=210698869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:29,0 chr2 210698870 . T . PASS END=210698870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 210698871 . C . PASS END=210698881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 210698882 . G . PASS END=210698883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 210698884 . C . PASS END=210698884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 210698885 . A . PASS END=210698886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,940:0,48,255:24,0 chr2 210698887 . T . PASS END=210698892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,68,255:25,0 chr2 210699636 . G . PASS END=210699729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:90:37:0,90,1350:0,111,255:40,0 chr2 210699730 . G . PASS END=210699734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:72:33:0,72,1080:0,99,255:26,0 chr2 210703946 . C . PASS END=210703949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:25,0 chr2 210703950 . G . PASS END=210703956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,945:0,90,255:30,0 chr2 210703957 . T . PASS END=210703957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 210703958 . G . PASS END=210703981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1172:0,83,255:33,0 chr2 210703982 . A . PASS END=210703982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr2 210703983 . G . PASS END=210704160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:33:0,83,1116:0,83,255:40,0 chr2 210705266 . G . PASS END=210705372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:42:0,120,1800:0,126,255:40,0 chr2 210707073 . G . PASS END=210707167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:29:0,87,1033:0,87,255:40,0 chr2 210707168 . T . PASS END=210707168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:76:51:0,76,1738:0,76,255:40,0 chr2 210707169 . T . PASS END=210707170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 210714175 . G . PASS END=210714340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1215:0,86,255:40,0 chr2 210714341 . G . PASS END=210714347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:75:31:0,75,1125:0,93,255:25,0 chr2 210737482 . G . PASS END=210737674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:33:0,81,1215:0,89,255:40,0 chr2 210737675 . T . PASS END=210737694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:62:26:0,62,771:0,62,255:26,0 chr2 210738492 . A . PASS END=210738521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:76:0,120,1800:0,226,255:40,0 chr2 210742678 . G . PASS END=210742697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1349:0,95,255:38,0 chr2 210742698 . T . PASS END=210742698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:36,0 chr2 210742699 . G . PASS END=210742849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:39:0,114,1710:0,117,255:40,0 chr2 210745685 . G . PASS END=210745692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:32:0,86,1247:0,86,255:33,0 chr2 210745693 . A . PASS END=210745693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1302:0,78,255:32,0 chr2 210745694 . A . PASS END=210745718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:88:36:0,88,1128:0,88,255:40,0 chr2 210745719 . T . PASS END=210745805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,96,255:40,0 chr2 210745806 . T . PASS END=210745808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 210745809 . G . PASS END=210745811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 210745812 . T . PASS END=210745812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,903:0,67,255:26,0 chr2 210745813 . C . PASS END=210745817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 210745818 . G . PASS END=210745818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 210752819 . G . PASS END=210752964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:34:0,81,1215:0,96,255:40,0 chr2 210752965 . A . PASS END=210752965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1129:0,63,255:26,0 chr2 210752966 . G . PASS END=210752967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:27,0 chr2 210752968 . A . PASS END=210752968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 210752969 . G . PASS END=210752971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 210752972 . G . PASS END=210752984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:25,0 chr2 210758887 . T . PASS END=210758887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 210758888 . T . PASS END=210758893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 210758894 . C . PASS END=210758894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 210758895 . A . PASS END=210758905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 210758906 . G . PASS END=210758957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,490:0,41,255:18,0 chr2 210758958 . A . PASS END=210758958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 210758959 . A . PASS END=210758959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 210758960 . G . PASS END=210758963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:21,0 chr2 210758964 . G . PASS END=210758969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 210758970 . T . PASS END=210758971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 210758972 . C . PASS END=210758974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 210758975 . G . PASS END=210759030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,821:0,69,255:23,0 chr2 210759031 . C . PASS END=210759031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 210759032 . A . PASS END=210759035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 210759036 . T . PASS END=210759036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:20,0 chr2 210759037 . C . PASS END=210759057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,892:0,69,255:23,0 chr2 210759058 . T . PASS END=210759086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:16:0,40,630:0,40,255:18,0 chr2 210759087 . C . PASS END=210759090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:12,0 chr2 210761037 . A . PASS END=210761137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:45:0,111,1665:0,119,255:40,0 chr2 210761142 . G . PASS END=210761142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,114,1710:0,129,255:38,0 chr2 210769489 . G . PASS END=210769493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:30,0 chr2 210769494 . G . PASS END=210769494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 210769495 . A . PASS END=210769498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1005:0,90,255:30,0 chr2 210769499 . T . PASS END=210769499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 210769500 . G . PASS END=210769650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:30:0,81,1141:0,82,255:40,0 chr2 210769651 . A . PASS END=210769669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:23:0,60,900:0,69,255:26,0 chr2 210769670 . G . PASS END=210769689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,47,255:19,0 chr2 210777284 . T . PASS END=210777391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:42:0,119,1800:0,119,255:40,0 chr2 210778526 . G . PASS END=210778526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 210778527 . T . PASS END=210778627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:31:0,81,1149:0,83,255:39,0 chr2 210778628 . C . PASS END=210778643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr2 210778644 . A . PASS END=210778644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:19,0 chr2 210778645 . G . PASS END=210778648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 210778649 . A . PASS END=210778664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,47,255:19,0 chr2 210782501 . C . PASS END=210782655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1111:0,89,255:40,0 chr2 210782656 . G . PASS END=210782682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 210783256 . A . PASS END=210783386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:34:0,81,1215:0,97,255:40,0 chr2 210783387 . T . PASS END=210783387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 210786224 . A . PASS END=210786225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:18,0 chr2 210786226 . A . PASS END=210786226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 210786227 . T . PASS END=210786228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 210786229 . C . PASS END=210786229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,545:0,15,255:17,0 chr2 210786230 . T . PASS END=210786237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,643:0,40,255:18,0 chr2 210786238 . C . PASS END=210786238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,623:0,26,255:16,0 chr2 210786239 . C . LowGQ END=210786239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,496:15,0,255:14,0 chr2 210786240 . G . PASS END=210786242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 210786243 . C . LowGQ END=210786243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,533:48,0,255:17,0 chr2 210786244 . T . PASS END=210786244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 210786245 . G . PASS END=210786245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 210786246 . T . PASS END=210786247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 210786248 . T . PASS END=210786248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,861:0,48,255:24,0 chr2 210786249 . C . PASS END=210786254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,925:0,64,255:26,0 chr2 210786255 . C . PASS END=210786255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 210786256 . C . PASS END=210786256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 210786257 . C . PASS END=210786257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:25,0 chr2 210786258 . A . PASS END=210786258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:29,0 chr2 210786259 . T . PASS END=210786259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1164:0,83,255:32,1 chr2 210786260 . C . PASS END=210786260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:12:34:0,12,984:0,12,255:31,1 chr2 210786261 . A . PASS END=210786261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1235:0,102,255:34,0 chr2 210786262 . A . PASS END=210786262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:68:34:0,68,983:0,68,255:32,0 chr2 210786263 . A . PASS END=210786263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,838:0,19,255:29,0 chr2 210786264 . G . PASS END=210786264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1352:0,111,255:37,0 chr2 210786265 . G . PASS END=210786266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:61:37:0,61,1149:0,61,255:36,0 chr2 210786267 . C . LowGQ END=210786267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,6:37:0:37:0,0,998:33,0,255:31,1 chr2 210786268 . A . PASS END=210786268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1260:0,94,255:36,0 chr2 210786269 . G . PASS END=210786269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:15:40:0,15,1141:0,15,255:35,0 chr2 210786270 . A . PASS END=210786271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1443:0,104,255:40,0 chr2 210786272 . C . PASS END=210786272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,5:40:1:40:0,1,1103:0,1,255:35,0 chr2 210786273 . A . PASS END=210786273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 210786274 . C . LowGQ END=210786274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,10:42:0:42:0,0,1023:54,0,255:31,0 chr2 210786275 . A . PASS END=210786276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:62:42:0,62,1305:0,62,255:38,0 chr2 210786277 . C . LowGQ END=210786277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,15:43:0:43:0,0,778:164,0,255:27,0 chr2 210786278 . T . PASS END=210786278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,113,1513:0,113,255:40,0 chr2 210786279 . T . PASS END=210786279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:65:43:0,65,1248:0,65,255:39,0 chr2 210786280 . A . PASS END=210786281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 210786282 . A . PASS END=210786282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1179:0,73,255:39,0 chr2 210786283 . G . LowGQ END=210786283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,7:43:0:43:0,0,1094:10,0,255:33,0 chr2 210786284 . A . PASS END=210786284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1401:0,109,255:39,0 chr2 210786285 . A . PASS END=210786285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1218:0,79,255:38,0 chr2 210786286 . C . LowGQ END=210786286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,12:43:0:43:0,0,870:106,0,255:29,0 chr2 210786287 . T . PASS END=210786287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1491:0,112,255:40,0 chr2 210786288 . T . PASS END=210786288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:48:43:0,48,1193:0,48,255:36,0 chr2 210786289 . G . PASS END=210786290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:63:43:0,63,1261:0,63,255:39,0 chr2 210786291 . A . PASS END=210786291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:51:45:0,51,1177:0,51,255:37,0 chr2 210786292 . G . PASS END=210786292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:62:45:0,62,1281:0,62,255:40,0 chr2 210786293 . C . PASS END=210786294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,6:45:32:44:0,32,1091:0,32,255:36,0 chr2 210786295 . G . PASS END=210786295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:99:44:0,99,1476:0,99,255:40,0 chr2 210786296 . G . PASS END=210786296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:64:44:0,64,1106:0,64,255:38,0 chr2 210786297 . A . LowGQ END=210786297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,7:44:0:44:0,0,991:13,0,255:35,0 chr2 210786298 . G . PASS END=210786298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:32:44:0,32,1127:0,32,255:36,0 chr2 210786299 . G . LowGQ END=210786299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,15:44:0:44:0,0,691:153,0,255:26,0 chr2 210786300 . A . PASS END=210786301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 210786302 . G . LowGQ END=210786302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,14:44:0:44:0,0,754:123,0,255:28,0 chr2 210786303 . A . PASS END=210786306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:43:0,81,1221:0,81,255:40,0 chr2 210786307 . G . LowGQ END=210786307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,15:43:0:43:0,0,697:120,0,255:27,0 chr2 210786308 . A . PASS END=210786308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:95:43:0,95,1241:0,95,255:40,0 chr2 210786309 . A . LowGQ END=210786309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,14:43:0:43:0,0,664:168,0,255:27,0 chr2 210786310 . A . PASS END=210786360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:40:0,99,1485:0,115,255:40,0 chr2 210786361 . G . PASS END=210786376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,99,255:33,0 chr2 210786377 . A . PASS END=210786389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,75,255:25,0 chr2 210786390 . A . PASS END=210786390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr2 210786391 . C . PASS END=210786397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 210786398 . C . PASS END=210786407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,653:0,43,255:19,0 chr2 210786408 . A . PASS END=210786408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:15,0 chr2 210786409 . A . PASS END=210786410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:16,0 chr2 210786976 . T . PASS END=210787085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:86:35:0,86,1243:0,86,255:40,0 chr2 210787086 . C . PASS END=210787086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:30,0 chr2 210787087 . G . PASS END=210787097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:31,0 chr2 210787098 . A . PASS END=210787107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:29:0,66,990:0,77,255:25,0 chr2 210791567 . A . PASS END=210791709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:38:0,93,1360:0,93,255:40,0 chr2 210791710 . G . PASS END=210791710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1368:0,78,255:37,0 chr2 210794595 . T . PASS END=210794695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:39:0,97,1435:0,97,255:40,0 chr2 210795692 . G . PASS END=210795778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:39:0,111,1665:0,111,255:40,0 chr2 210798546 . G . PASS END=210798547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 210798548 . A . PASS END=210798548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 210798549 . G . PASS END=210798558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr2 210798559 . T . PASS END=210798559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr2 210798560 . G . PASS END=210798560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 210798561 . T . PASS END=210798565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:13:0,3,368:0,3,255:12,0 chr2 210798566 . T . PASS END=210798566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 210798567 . G . PASS END=210798570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,421:0,3,255:12,0 chr2 210798571 . G . PASS END=210798571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 210798572 . G . LowGQ END=210798575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:13:0,0,405:0,0,255:14,0 chr2 210798576 . C . PASS END=210798576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:16,0 chr2 210798577 . C . PASS END=210798577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 210798578 . C . PASS END=210798584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:18,0 chr2 210798585 . T . PASS END=210798586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 210798587 . G . PASS END=210798587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr2 210798588 . G . PASS END=210798588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 210798589 . G . PASS END=210798591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,613:0,18,255:17,0 chr2 210798592 . T . PASS END=210798592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,659:0,26,255:17,0 chr2 210798593 . G . PASS END=210798593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 210798594 . G . PASS END=210798595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:18,0 chr2 210798596 . T . PASS END=210798596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 210798597 . G . PASS END=210798598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,620:0,21,255:18,0 chr2 210798599 . C . PASS END=210798599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 210798600 . A . PASS END=210798600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 210798601 . T . PASS END=210798601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 210798602 . T . PASS END=210798602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 210798603 . T . PASS END=210798603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,768:0,63,255:21,0 chr2 210798604 . C . PASS END=210798609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,713:0,24,255:20,0 chr2 210798610 . C . PASS END=210798610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 210798611 . C . PASS END=210798611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 210798612 . C . PASS END=210798616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 210798617 . A . PASS END=210798617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr2 210798618 . T . PASS END=210798618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 210798619 . T . PASS END=210798619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 210798620 . C . PASS END=210798628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,793:0,69,255:23,0 chr2 210798629 . G . PASS END=210798630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,806:0,53,255:22,0 chr2 210798631 . T . PASS END=210798651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr2 210798652 . T . PASS END=210798652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,815:0,58,255:24,0 chr2 210798653 . C . PASS END=210798689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,931:0,69,255:25,0 chr2 210798690 . C . PASS END=210798702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,51,255:17,0 chr2 210798703 . A . PASS END=210798704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 210798705 . C . PASS END=210798706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 210798707 . C . PASS END=210798708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr2 210798709 . T . PASS END=210798709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:12,0 chr2 210798710 . G . PASS END=210798711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 210798712 . T . PASS END=210798712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 210798713 . G . PASS END=210798713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 210798714 . A . PASS END=210798729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:21:10:0,21,315:0,26,255:11,0 chr2 210800438 . G . PASS END=210800532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:37:0,93,1474:0,93,255:40,0 chr2 210801568 . G . PASS END=210801657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:61:0,120,1800:0,152,255:40,0 chr2 210802253 . A . PASS END=210802354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,1:75:99:51:0,120,1800:0,140,255:40,0 chr2 210804196 . G . PASS END=210804367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:34:0,84,1260:0,84,255:40,0 chr2 210804368 . A . PASS END=210804368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 210804369 . T . PASS END=210804372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 210804373 . C . PASS END=210804374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 210804375 . A . PASS END=210804376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:57:31:0,57,855:0,93,255:19,0 chr2 210805681 . A . PASS END=210805736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:68:0,120,1800:0,177,255:40,0 chr2 210805945 . C . PASS END=210806175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:32:0,80,1150:0,80,255:40,1 chr2 210806176 . T . PASS END=210806177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:27,0 chr2 210806178 . A . PASS END=210806183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1117:0,80,255:29,0 chr2 210806184 . T . PASS END=210806184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 210806185 . A . PASS END=210806187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 210806188 . A . PASS END=210806188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 210806189 . G . PASS END=210806193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 210806194 . T . PASS END=210806205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:27:0,63,945:0,68,255:26,0 chr2 210806206 . T . PASS END=210806207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:20,0 chr2 210806208 . C . PASS END=210806212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 210806213 . G . PASS END=210806213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 210808104 . G . PASS END=210808238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1382:0,81,255:40,0 chr2 210809775 . G . PASS END=210809777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:29:0,75,1125:0,87,255:26,0 chr2 210809778 . G . PASS END=210809871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1143:0,90,255:40,0 chr2 210809872 . T . PASS END=210809872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1124:0,72,255:26,0 chr2 210809873 . C . PASS END=210809883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:28,0 chr2 210809884 . T . PASS END=210809884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 210809885 . C . PASS END=210809885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 210809886 . A . PASS END=210809913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,845:0,69,255:26,0 chr2 210810571 . A . PASS END=210810667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:43:0,99,1485:0,119,255:40,0 chr2 210818824 . T . PASS END=210818833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,684:0,54,255:19,0 chr2 210818834 . C . PASS END=210818848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,856:0,72,255:26,0 chr2 210818849 . G . PASS END=210818852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:28,0 chr2 210818853 . T . PASS END=210818853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 210818854 . A . PASS END=210818973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:29:0,87,1080:0,87,255:40,0 chr2 210818974 . C . PASS END=210818975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:34:0,60,900:0,86,255:20,0 chr2 210818976 . G . PASS END=210818992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:41:18:0,41,659:0,41,255:19,0 chr2 210818993 . A . PASS END=210818993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 210818994 . G . PASS END=210818994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 210822368 . G . PASS END=210822374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:31,0 chr2 210822375 . A . PASS END=210822375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1172:0,63,255:31,0 chr2 210822376 . C . PASS END=210822460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:34:0,86,1178:0,86,255:40,0 chr2 210823843 . G . PASS END=210823878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,158,255:40,0 chr2 210824213 . G . PASS END=210824243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,887:0,62,255:26,0 chr2 210824244 . G . PASS END=210824244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 210824245 . G . PASS END=210824245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 210824246 . C . PASS END=210824256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 210824257 . A . PASS END=210824257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:28,0 chr2 210824258 . G . PASS END=210824271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1218:0,90,255:32,0 chr2 210824272 . G . PASS END=210824272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1155:0,66,255:31,0 chr2 210824273 . A . PASS END=210824421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1177:0,80,255:39,0 chr2 210824422 . C . PASS END=210824431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr2 210832161 . G . PASS END=210832167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:26:0,71,939:0,71,255:26,0 chr2 210832168 . G . PASS END=210832169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,989:0,81,255:29,0 chr2 210832170 . A . PASS END=210832170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 210832171 . A . PASS END=210832172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 210832173 . T . PASS END=210832173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 210832174 . G . PASS END=210832177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 210832178 . A . PASS END=210832178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1038:0,54,255:30,0 chr2 210832179 . C . PASS END=210832180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:31,0 chr2 210832181 . C . PASS END=210832191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:34:0,86,1239:0,86,255:37,0 chr2 210832192 . C . PASS END=210832193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:70:39:0,70,1352:0,70,255:36,0 chr2 210832194 . G . PASS END=210832323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:38:0,84,1356:0,84,255:40,0 chr2 210832324 . A . PASS END=210832324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:46:43:0,46,1286:0,46,255:32,0 chr2 210832325 . G . PASS END=210832347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1257:0,89,255:33,0 chr2 210832348 . A . PASS END=210832348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1058:0,60,255:29,0 chr2 210832349 . T . PASS END=210832360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1133:0,80,255:31,0 chr2 210832361 . G . PASS END=210832361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:24,0 chr2 210834442 . A . PASS END=210834469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:40:0,120,1498:0,120,255:40,0 chr2 210834492 . G . PASS END=210834615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:43:0,101,1499:0,101,255:40,0 chr2 210835556 . G . PASS END=210835666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:32:0,81,1215:0,89,255:40,0 chr2 210835667 . G . PASS END=210835670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:29:0,66,990:0,87,255:26,0 chr2 210835671 . T . PASS END=210835681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:45:23:0,45,675:0,69,255:17,0 chr2 210835683 . T . PASS END=210835683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:16,0 chr2 210836925 . G . PASS END=210837048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:43:0,111,1635:0,114,255:40,0 chr2 210837788 . A . PASS END=210837790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,613:0,40,255:17,0 chr2 210837791 . G . PASS END=210837800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:26,0 chr2 210837801 . G . PASS END=210837958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:27:0,81,1039:0,81,255:40,0 chr2 210837959 . G . PASS END=210837968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,96,255:31,0 chr2 210837969 . G . PASS END=210837977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 210837978 . C . PASS END=210837978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:25,0 chr2 210837979 . C . PASS END=210837987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,87,255:26,0 chr2 210837988 . T . PASS END=210837994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:45:28:0,45,675:0,84,255:19,0 chr2 210840843 . C . PASS END=210841027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:92:34:0,92,1243:0,92,255:40,0 chr2 210841029 . T . PASS END=210841029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,99,1485:0,141,255:33,0 chr2 210841637 . C . PASS END=210841646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,272:0,24,255:8,0 chr2 210841647 . A . PASS END=210841674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:10:0,30,321:0,30,255:13,0 chr2 210841675 . C . PASS END=210841686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:17,0 chr2 210841687 . T . PASS END=210841687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:16,0 chr2 210841688 . A . PASS END=210841705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:19,0 chr2 210841706 . C . PASS END=210841706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 210841707 . G . PASS END=210841707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 210841708 . G . PASS END=210841712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:23,0 chr2 210841713 . T . PASS END=210841713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 210841714 . C . PASS END=210841730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:24:0,68,802:0,68,255:26,0 chr2 210841731 . G . PASS END=210841735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 210841736 . A . PASS END=210841736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,792:0,34,255:24,0 chr2 210841737 . G . PASS END=210841743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,976:0,81,255:27,0 chr2 210841744 . C . PASS END=210841767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:64:22:0,64,746:0,64,255:25,0 chr2 210841768 . A . PASS END=210841769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 210841770 . A . PASS END=210841771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr2 210841772 . A . PASS END=210841773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:21,0 chr2 210841774 . T . PASS END=210841784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:23,0 chr2 210841785 . C . PASS END=210841785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 210841786 . A . PASS END=210841787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 210841788 . T . PASS END=210841788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,685:0,52,255:19,0 chr2 210841789 . T . PASS END=210841791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 210841792 . T . PASS END=210841792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 210841793 . A . PASS END=210841793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:19,0 chr2 210841794 . G . PASS END=210841797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:22:0,53,814:0,53,255:19,0 chr2 210841798 . A . PASS END=210841799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 210841800 . C . PASS END=210841802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 210843253 . C . PASS END=210843345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1047:0,84,255:40,0 chr2 210843346 . C . PASS END=210843382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:43:0,99,1434:0,99,255:40,0 chr2 210843383 . G A, 178.95 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,20,0:0,24,0:129:217,132,0,317,317,317:255,132,0:0,0:1.7895e+02,1.2895e+02,0.0000e+00,3.1372e+02,3.4849e+02,3.1673e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,17,27:0,0,17,27 chr2 210843384 . C . PASS END=210843420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,92,255:40,0 chr2 210843421 . A . PASS END=210843425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 210843426 . G . PASS END=210843432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 210846903 . A . PASS END=210846904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,584:0,40,255:19,0 chr2 210846905 . G . PASS END=210846906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 210846907 . C . PASS END=210846908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 210846909 . C . PASS END=210846979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:27:0,80,1000:0,80,255:38,0 chr2 210846980 . T . PASS END=210846980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:37,0 chr2 210846981 . C . PASS END=210847017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,92,255:37,0 chr2 210847018 . G . PASS END=210847034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:26:0,64,917:0,64,255:26,0 chr2 210847035 . G . PASS END=210847035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 210847036 . C . PASS END=210847038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 210847039 . G . PASS END=210847039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,914:0,48,255:24,0 chr2 210847040 . A . PASS END=210847045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 210849580 . T . PASS END=210849636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:32:0,84,1260:0,94,255:40,0 chr2 210856890 . G . PASS END=210856971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:90:36:0,90,1349:0,90,255:40,0 chr2 210858039 . C . PASS END=210858150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:42:0,113,1715:0,113,255:40,0 chr2 210858789 . C . PASS END=210858936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:88:35:0,88,1174:0,88,255:40,0 chr2 210858937 . A . PASS END=210858937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:30,0 chr2 210858938 . T . PASS END=210858951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1054:0,101,255:34,0 chr2 210858952 . A . PASS END=210858952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:55:34:0,55,1088:0,55,255:27,0 chr2 210858953 . G . PASS END=210858960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1216:0,83,255:29,0 chr2 210858961 . G . PASS END=210858961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1125:0,65,255:27,0 chr2 210858962 . G . PASS END=210858968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1163:0,80,255:28,0 chr2 210858969 . A . PASS END=210858969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,967:0,79,255:26,0 chr2 210858970 . C . PASS END=210858971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 210858972 . G . PASS END=210858988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,903:0,78,255:26,0 chr2 210860053 . A . PASS END=210860065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:19,0 chr2 210860066 . C . PASS END=210860067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 210860068 . A . PASS END=210860068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 210860069 . C . PASS END=210860072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 210860073 . A . PASS END=210860073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 210860074 . G . PASS END=210860086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,767:0,60,255:22,0 chr2 210860087 . A . PASS END=210860087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 210860088 . G . PASS END=210860112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,839:0,65,255:26,0 chr2 210860113 . A . PASS END=210860319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:30:0,81,1215:0,87,255:40,0 chr2 210867386 . A . PASS END=210867507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:37:0,95,1319:0,95,255:40,0 chr2 210868162 . G . PASS END=210868192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:45:0,120,1800:0,131,255:40,0 chr2 210874381 . G . PASS END=210874460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:52:0,120,1800:0,147,255:40,0 chr2 210880697 . A . PASS END=210880697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,81,255:19,0 chr2 210880698 . C . PASS END=210880701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 210880702 . C . PASS END=210880836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:81:30:0,81,1066:0,90,255:40,0 chr2 210880928 . T . PASS END=210880981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:91:0,120,1800:0,249,255:40,0 chr2 210881231 . G . PASS END=210881365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,109,1752:0,109,255:40,0 chr2 210882197 . G . PASS END=210882201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1248:0,92,255:36,0 chr2 210882202 . C . PASS END=210882202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:37,0 chr2 210882203 . T . PASS END=210882208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:98:38:0,98,1365:0,98,255:39,0 chr2 210882209 . A . PASS END=210882274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:88:39:0,88,1377:0,88,255:40,0 chr2 210882275 . T . PASS END=210882275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1259:0,75,255:36,0 chr2 210882276 . G . PASS END=210882283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1251:0,108,255:36,0 chr2 210882877 . C . PASS END=210882942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:63:0,120,1800:0,173,255:40,0 chr2 210884393 . G . PASS END=210884500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:32:0,87,1135:0,87,255:40,0 chr2 210884501 . T . PASS END=210884501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1070:0,66,255:31,0 chr2 210884502 . C . PASS END=210884507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1073:0,82,255:33,0 chr2 210884508 . A . PASS END=210884508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:29,0 chr2 210884509 . T . PASS END=210884509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 210884510 . C . PASS END=210884514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:25,0 chr2 210884515 . A . PASS END=210884515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:57:34:0,57,855:0,102,255:19,0 chr2 210887673 . T . PASS END=210887826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:47:0,102,1654:0,102,255:40,2 chr2 210887827 . T . PASS END=210887827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1558:0,72,255:40,2 chr2 210887828 . T . PASS END=210887900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:37:0,81,1215:0,88,255:40,0 chr2 210887901 . A . PASS END=210887903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:37:0,72,1080:0,78,255:26,0 chr2 210888757 . C . PASS END=210888757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 210888758 . T . PASS END=210888763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 210888764 . T . PASS END=210888764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 210888765 . C . PASS END=210888765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 210888766 . T . PASS END=210888766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 210888767 . T . PASS END=210888767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 210888768 . G . PASS END=210888768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 210888769 . A . PASS END=210888907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,962:0,81,255:40,0 chr2 210888908 . A . PASS END=210888908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 210888909 . C . PASS END=210888913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 210888914 . T . PASS END=210888914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:26,0 chr2 210888915 . T . PASS END=210888917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 210888918 . T . PASS END=210888923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:25,0 chr2 210888924 . C . PASS END=210888925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,855:0,70,255:19,0 chr2 210889828 . C . PASS END=210889880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,120,1800:0,129,255:40,0 chr2 210889881 . C . PASS END=210889881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,8:66:65:66:0,65,1765:0,65,255:40,0 chr2 210889882 . T . PASS END=210889940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:46:0,101,1800:0,101,255:40,0 chr2 210891104 . C . PASS END=210891126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:69:0,120,1800:0,191,255:40,0 chr2 210892020 . C . PASS END=210892074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:88:0,120,1800:0,251,255:40,0 chr2 210893569 . C . PASS END=210893693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:47:0,120,1800:0,124,255:40,0 chr2 210894527 . T . PASS END=210894642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:63:0,120,1800:0,174,255:40,0 chr2 210896145 . C . PASS END=210896270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:48:0,111,1665:0,128,255:40,0 chr2 210905055 . T . PASS END=210905251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:96:55:0,96,1800:0,96,255:40,0 chr2 210908648 . T . PASS END=210908655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:24,0 chr2 210908656 . G . PASS END=210908674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1103:0,83,255:36,0 chr2 210908675 . A . PASS END=210908675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1336:0,78,255:38,0 chr2 210908676 . T . PASS END=210908676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:48:39:0,48,1343:0,48,255:37,0 chr2 210908677 . A . PASS END=210908677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:37,0 chr2 210908678 . G . PASS END=210908683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:40:0,85,1482:0,85,255:40,0 chr2 210908684 . A . PASS END=210908684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1567:0,66,255:40,0 chr2 210908685 . A . PASS END=210908697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:93:44:0,93,1501:0,93,255:40,0 chr2 210908698 . T . PASS END=210908698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,2:48:75:48:0,75,1652:0,75,255:40,0 chr2 210908699 . C . PASS END=210908828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:41:0,102,1530:0,105,255:40,0 chr2 210940276 . C . PASS END=210940480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:27:0,81,1012:0,81,255:40,0 chr2 210944484 . A . PASS END=210944500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:81:78:0,81,1215:0,200,255:37,0 chr2 210944501 . C . PASS END=210944502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,5:97:78:97:0,78,1170:0,209,255:24,0 chr2 210944503 . G . PASS END=210944516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,4:113:81:101:0,81,1215:0,231,255:29,2 chr2 210944517 . CTT C,CT,CTTT,CTTTT, 50.01 PASS DP=111;MQ=249.43;MQRankSum=7.147;ReadPosRankSum=1.647;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/3:26,5,6,62,12,0:0.045,0.054,0.559,0.108,0.000:111:18,4,0,29,6,0:8,1,6,33,6,0:27:59,500,240,426,1046,154,0,184,98,25,269,675,494,180,236,1146,1146,1146,1146,1146,1146:255,0,255:26,121:5.0008e+01,4.5000e+02,2.4325e+02,4.2620e+02,4.5000e+02,1.5652e+02,7.7473e-03,1.9325e+02,1.0652e+02,2.7514e+01,2.6910e+02,4.5000e+02,4.5000e+02,1.8875e+02,2.3875e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,9.00,12.01,9.00,18.00,12.01,9.00,18.00,18.00,12.01,9.00,18.00,18.00,18.00,12.01,34.77,43.77,43.77,43.77,43.77,37.78:17,9,58,27:15,11,34,51 chr2 210944518 . T . LowGQ END=210944519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:33,88:121:0:118:0,0,0:167,0,255:40,18 chr2 210944520 . T . PASS END=210944568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,3:118:99:114:0,120,1800:0,128,255:40,3 chr2 210944569 . T . PASS END=210944614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,2:102:99:78:0,120,1800:0,162,255:40,0 chr2 210951018 . T . PASS END=210951165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:68:0,120,1800:0,184,255:40,0 chr2 210951166 . A . PASS END=210951185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:81:54:0,81,1215:0,90,255:40,0 chr2 210951186 . T . PASS END=210951189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:69:53:0,69,1035:0,126,255:25,0 chr2 210951190 . A . PASS END=210951190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:57:52:0,57,855:0,140,255:19,0 chr2 210951191 . C . PASS END=210951191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:60:52:0,60,900:0,117,255:19,0 chr2 210951192 . C . PASS END=210951199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:45:42:0,45,675:0,57,255:18,0 chr2 210951200 . C . PASS END=210951211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:12:36:0,12,180:0,22,255:5,0 chr2 210951212 . A . LowGQ END=210951213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:0:30:0,0,606:0,0,255:3,1 chr2 210962134 . T . PASS END=210962137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 210962148 . T . PASS END=210962217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,137,255:40,0 chr2 210962806 . C . PASS END=210962931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:47:0,99,1485:0,125,255:40,0 chr2 210968813 . T . PASS END=210968816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1266:0,102,255:34,0 chr2 210968817 . T . PASS END=210968817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1164:0,63,255:31,0 chr2 210968818 . T . PASS END=210968820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1202:0,86,255:34,0 chr2 210968821 . A . PASS END=210968821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr2 210968822 . C . PASS END=210969025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:36:0,80,1335:0,80,255:40,0 chr2 210993755 . C . PASS END=210993892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:40:0,84,1260:0,87,255:40,0 chr2 210993893 . G . PASS END=210993896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:38:0,75,1125:0,114,255:25,0 chr2 211018219 . A . PASS END=211019325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:94:37:0,94,1351:0,94,255:40,1 chr2 211019326 . T . PASS END=211019326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:30,0 chr2 211019327 . A . PASS END=211019335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:32,0 chr2 211035061 . C . PASS END=211035130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,143,255:40,1 chr2 211053064 . C . PASS END=211053064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 211053685 . C . PASS END=211053778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:96:45:0,96,1440:0,130,255:40,0 chr2 211057528 . T . PASS END=211057604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:95:38:0,95,1372:0,95,255:40,0 chr2 211057605 . C . PASS END=211057605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:33,0 chr2 211057606 . T . PASS END=211057614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:33,0 chr2 211059935 . C . PASS END=211059935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 211059936 . A . PASS END=211059937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:31:0,93,1180:0,93,255:33,0 chr2 211059938 . T . PASS END=211059938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:52:33:0,52,1078:0,52,255:31,0 chr2 211059939 . A . PASS END=211060041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:87:30:0,87,1187:0,90,255:40,0 chr2 211060042 . T . PASS END=211060042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:29,0 chr2 211060043 . G . PASS END=211060058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,938:0,87,255:29,0 chr2 211060059 . C . PASS END=211060062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:22,0 chr2 211068055 . C . PASS END=211068168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,161,255:40,0 chr2 211069305 . C . PASS END=211069400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,141,255:40,0 chr2 211069401 . G . PASS END=211069406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,134,255:40,0 chr2 211070356 . C . PASS END=211070520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:47:0,111,1745:0,111,255:40,0 chr2 211074920 . C . PASS END=211074986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:50:0,120,1800:0,150,255:40,0 chr2 211081071 . C . PASS END=211081075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1209:0,86,255:34,0 chr2 211081076 . A . PASS END=211081076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1164:0,58,255:31,0 chr2 211081077 . G . PASS END=211081235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:95:36:0,95,1343:0,95,255:40,0 chr2 211082689 . T . PASS END=211082826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:35:0,102,1530:0,105,255:40,0 chr2 211085371 . T . PASS END=211085506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:87:37:0,87,1305:0,104,255:40,0 chr2 211085507 . C . PASS END=211085526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:26:0,60,838:0,61,255:24,0 chr2 211089123 . A . PASS END=211089136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,0:85:99:83:0,120,1800:0,177,255:40,0 chr2 211089911 . C . PASS END=211089926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 211089927 . G . PASS END=211089927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 211089928 . G . PASS END=211089928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 211089929 . C . PASS END=211089929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 211089930 . G . PASS END=211089930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 211089931 . C . PASS END=211089931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 211089932 . G . PASS END=211089932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 211089933 . G . PASS END=211089935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 211089936 . C . PASS END=211089937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 211089938 . C . PASS END=211089938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 211089939 . G . PASS END=211089939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 211089940 . G . PASS END=211089946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 211089947 . C . PASS END=211089949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 211089950 . A . PASS END=211089950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 211089951 . G . PASS END=211089972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:18,0 chr2 211089973 . A . PASS END=211089973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 211089974 . A . PASS END=211089987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,631:0,54,255:18,0 chr2 211155770 . T . PASS END=211155798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:80:0,120,1800:0,230,255:40,0 chr2 211158447 . C . PASS END=211158524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:89:39:0,89,1620:0,89,255:40,0 chr2 211158526 . T . PASS END=211158526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1368:0,111,255:37,0 chr2 211158969 . C . PASS END=211159142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:93:32:0,93,1310:0,96,255:40,0 chr2 211163144 . C . PASS END=211163246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:35:0,87,1280:0,92,255:40,0 chr2 211163247 . A . PASS END=211163259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:27:0,75,1125:0,81,255:26,0 chr2 211163260 . T . PASS END=211163260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:25,0 chr2 211163261 . C . PASS END=211163281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,858:0,62,255:26,0 chr2 211163282 . T . PASS END=211163287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:50:22:0,50,767:0,50,255:18,0 chr2 211167212 . C . PASS END=211167239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:75:0,120,1800:0,195,255:40,0 chr2 211167492 . C . PASS END=211167516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,156,255:40,0 chr2 211168266 . C . PASS END=211168268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:54:0,120,1800:0,162,255:40,0 chr2 211179635 . C . PASS END=211179639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,654:0,44,255:19,0 chr2 211179640 . T . PASS END=211179642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 211179643 . C . PASS END=211179643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 211179644 . A . PASS END=211179645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 211179646 . A . PASS END=211179646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 211179647 . G . PASS END=211179647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:22,0 chr2 211179648 . A . PASS END=211179648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,677:0,49,255:21,0 chr2 211179649 . G . PASS END=211179652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 211179653 . A . PASS END=211179653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 211179654 . A . PASS END=211179659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,750:0,69,255:23,0 chr2 211179660 . T . PASS END=211179660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 211179661 . C . PASS END=211179670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,809:0,69,255:23,0 chr2 211179671 . T . PASS END=211179671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,725:0,30,255:21,0 chr2 211179672 . T . PASS END=211179675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 211179676 . C . PASS END=211179676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,685:0,27,255:21,0 chr2 211179677 . T . PASS END=211179681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:24,0 chr2 211179682 . C . PASS END=211179682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 211179683 . A . PASS END=211179690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,841:0,62,255:25,0 chr2 211179691 . G . PASS END=211179691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 211179692 . T . PASS END=211179692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 211179693 . G . PASS END=211179693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 211179694 . C . PASS END=211179715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,931:0,64,255:26,0 chr2 211179716 . G . PASS END=211179745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:19,0 chr2 211179746 . C . PASS END=211179761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:13:0,33,495:0,39,255:13,0 chr2 211179762 . G . PASS END=211179762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 211179763 . C . PASS END=211179763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 211179764 . C . PASS END=211179764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:11,0 chr2 211179765 . A . PASS END=211179766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:12,0 chr2 211299211 . T . PASS END=211299279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1173:0,92,255:38,0 chr2 211299280 . A . PASS END=211299280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 211299281 . G . PASS END=211299287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 211300111 . C . PASS END=211300183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:61:0,120,1800:0,146,255:40,0 chr2 211300940 . C . PASS END=211301111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:32:0,81,1215:0,92,255:40,0 chr2 211301112 . A . PASS END=211301116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:31:0,75,1125:0,77,255:26,0 chr2 211302414 . C . PASS END=211302568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,92,255:40,0 chr2 211302569 . A . PASS END=211302585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:63:26:0,63,945:0,71,255:24,0 chr2 211302586 . T . PASS END=211302586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr2 211302587 . G . PASS END=211302589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 211302590 . G . PASS END=211302592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 211302593 . T . PASS END=211302596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,731:0,49,255:19,0 chr2 211305322 . C . PASS END=211305358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:93:44:0,93,1552:0,93,255:40,0 chr2 211305359 . G . PASS END=211305359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:78:48:0,78,1496:0,78,255:40,0 chr2 211305360 . C . PASS END=211305463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:32:0,81,1215:0,89,255:40,0 chr2 211305464 . C . PASS END=211305469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:26,0 chr2 211306032 . C . PASS END=211306167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:40:0,102,1530:0,107,255:40,0 chr2 211319831 . C . PASS END=211319831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 211319832 . G . PASS END=211319840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,945:0,62,255:26,0 chr2 211319841 . A . PASS END=211319846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 211319847 . C . PASS END=211319847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 211319848 . T . PASS END=211319861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,950:0,81,255:29,0 chr2 211319862 . T . PASS END=211319966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:29:0,84,1033:0,87,255:40,0 chr2 211319967 . A . PASS END=211319967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1335:0,75,255:35,0 chr2 211319968 . G . PASS END=211319973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1302:0,92,255:36,0 chr2 211319974 . T . PASS END=211319974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1294:0,78,255:35,0 chr2 211319975 . G . PASS END=211319976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1325:0,108,255:36,0 chr2 211319977 . T . PASS END=211319977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr2 211319978 . A . PASS END=211319991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1310:0,92,255:34,0 chr2 211319992 . A . PASS END=211319992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:29,0 chr2 211319993 . G . PASS END=211319993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 211319994 . G . PASS END=211320012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:26:0,60,900:0,64,255:26,0 chr2 211320013 . A . PASS END=211320018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:42:27:0,42,630:0,64,255:18,0 chr2 211320019 . T . PASS END=211320022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:30:26:0,30,450:0,78,255:11,0 chr2 211320023 . T . PASS END=211320024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:21:24:0,21,315:0,72,255:7,0 chr2 211320025 . A . PASS END=211320025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:18:24:0,18,270:0,72,255:6,0 chr2 211320026 . A . PASS END=211320026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:21:24:0,21,315:0,72,255:7,0 chr2 211320027 . G . PASS END=211320031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:15:22:0,15,225:0,19,255:5,0 chr2 211320032 . G . LowGQ END=211320033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,4:23:0:22:0,0,582:6,0,255:2,0 chr2 211320034 . A . PASS END=211320036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:21:0,14,225:0,14,255:3,0 chr2 211320037 . A . LowGQ END=211320038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:21:0,0,541:22,0,255:2,0 chr2 211336320 . T . PASS END=211336369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:46:0,120,1800:0,125,255:40,0 chr2 211336683 . C . PASS END=211336800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:33:0,84,1260:0,95,255:40,0 chr2 211341040 . C . PASS END=211341118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:95:39:0,95,1258:0,95,255:40,0 chr2 211341119 . A . PASS END=211341136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:53:0,117,1755:0,118,255:40,0 chr2 211342174 . C . PASS END=211342175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,120,1800:0,134,255:40,0 chr2 211342176 . G . PASS END=211342193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:53:0,120,1800:0,142,255:40,0 chr2 211342488 . A . PASS END=211342490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:62:0,120,1800:0,147,255:40,0 chr2 211384491 . A . PASS END=211384508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:83:0,120,1800:0,215,255:40,0 chr2 211421382 . A . PASS END=211421382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,105,1575:0,117,255:35,0 chr2 211421443 . C . PASS END=211421451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:63:50:0,63,945:0,73,255:26,1 chr2 211421452 . A ATCT, 50.00 PASS DP=54;MQ=250.00;MQRankSum=6.182;ReadPosRankSum=1.409;FractionInformativeReads=0.981;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,30,0:0.566,0.000:53:16,11,0:7,19,0:48:79,0,48,1247,807,2054:255,0,255:23,41:5.0000e+01,7.4293e-05,5.1483e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,29.00,32.00,34.77,63.77,37.77:10,13,18,12:11,12,15,15 chr2 211421453 . T . LowGQ END=211421453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:27,27:54:0:54:0,0,0:255,0,255:40,0 chr2 211421454 . C . PASS END=211421503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,128,255:40,0 chr2 211421504 . C . PASS END=211421584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,184,255:40,0 chr2 211438022 . G . PASS END=211438132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,139,255:40,0 chr2 211438136 . G . PASS END=211438136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,117,1755:0,159,255:39,0 chr2 211441070 . G . PASS END=211441214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:37:0,107,1412:0,107,255:40,0 chr2 211441216 . T . PASS END=211441216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,108,1620:0,138,255:36,0 chr2 211442145 . G . PASS END=211442152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1384:0,114,255:40,0 chr2 211442153 . T . PASS END=211442153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1230:0,73,255:38,0 chr2 211442154 . T . PASS END=211442229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,99,1446:0,99,255:40,2 chr2 211442230 . A . PASS END=211442230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:55:47:0,55,1566:0,55,255:39,2 chr2 211442231 . A . PASS END=211442234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,99,1639:0,99,255:40,0 chr2 211444438 . G . PASS END=211444490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:92:0,120,1800:0,227,255:40,0 chr2 211444491 . T . PASS END=211444494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:103:0,120,1800:0,255,255:40,0 chr2 211444496 . T . PASS END=211444496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,1:102:99:102:0,120,1800:0,255,255:40,0 chr2 211444503 . A . PASS END=211444503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,2:88:99:88:0,120,1800:0,232,255:40,0 chr2 211447341 . G . PASS END=211447433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:61:0,120,1800:0,180,255:40,0 chr2 211452779 . C . PASS END=211452779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 211452782 . G . PASS END=211452872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:50:0,120,1800:0,141,255:40,0 chr2 211454819 . C . PASS END=211454819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 211454830 . C . PASS END=211454950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:84:29:0,84,1260:0,87,255:40,0 chr2 211454951 . T . PASS END=211454951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:73:50:0,73,1753:0,73,255:40,0 chr2 211454952 . C . PASS END=211454958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1800:0,141,255:40,0 chr2 211455524 . A . PASS END=211455630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,106,1421:0,106,255:40,0 chr2 211456549 . C . PASS END=211456549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 211456555 . A . PASS END=211456555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr2 211456556 . G . PASS END=211456595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:83:33:0,83,1186:0,83,255:40,0 chr2 211456596 . C . PASS END=211456636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:41:0,99,1485:0,99,255:40,0 chr2 211456637 . A G, 165.17 PASS DP=41;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,41,0:1.000,0.000:41:0,17,0:0,24,0:115:203,118,0,303,303,303:255,123,0:0,0:1.6517e+02,1.1517e+02,0.0000e+00,2.9994e+02,3.3471e+02,3.0295e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,20,21:0,0,28,13:211456637 chr2 211456638 . C . PASS END=211456638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 211456639 . C T, 156.54 PASS DP=38;MQ=250.00;FractionInformativeReads=0.974 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,37,0:1.000,0.000:37:0,16,0:0,21,0:107:194,110,0,294,294,294:255,114,0:0,0:1.5654e+02,1.0654e+02,0.0000e+00,2.9131e+02,3.2608e+02,2.9432e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,18,19:0,0,25,12:211456637 chr2 211456640 . C . PASS END=211456680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1106:0,86,255:35,0 chr2 211456681 . T . PASS END=211456694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1148:0,83,255:33,0 chr2 211457596 . C . PASS END=211457596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 211457602 . G . PASS END=211457670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:43:0,111,1665:0,118,255:40,0 chr2 211457671 . A . PASS END=211457677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:96:39:0,96,1440:0,101,255:35,0 chr2 211457678 . G . PASS END=211457678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1396:0,79,255:31,0 chr2 211457679 . A . PASS END=211457680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:39:0,93,1395:0,117,255:31,0 chr2 211459220 . A . PASS END=211459220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 211459232 . T . PASS END=211459330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:61:0,120,1800:0,147,255:40,2 chr2 211459335 . G . PASS END=211459335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:66:0,120,1800:0,165,255:40,0 chr2 211460211 . G . PASS END=211460306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:59:0,120,1800:0,163,255:40,0 chr2 211464096 . G . PASS END=211464280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:37:0,81,1215:0,90,255:40,0 chr2 211464281 . C . PASS END=211464281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 211464282 . T . PASS END=211464282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 211464283 . G . PASS END=211464283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 211464284 . T . PASS END=211464284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 211464285 . G . PASS END=211464285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 211465279 . G . PASS END=211465288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:23,0 chr2 211465289 . A . PASS END=211465289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1115:0,80,255:31,0 chr2 211465290 . T . PASS END=211465290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr2 211465291 . T . PASS END=211465295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1395:0,96,255:35,0 chr2 211465296 . A . PASS END=211465296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1210:0,75,255:33,0 chr2 211465297 . G . PASS END=211465431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:35:0,84,1260:0,95,255:40,0 chr2 211465432 . A . PASS END=211465436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:69:41:0,69,1035:0,106,255:25,0 chr2 211466926 . A . PASS END=211467039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:30:0,85,1064:0,85,255:40,0 chr2 211467040 . G . PASS END=211467050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,71,255:23,0 chr2 211467051 . A . PASS END=211467051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr2 211467052 . A . PASS END=211467054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:18,0 chr2 211467056 . T . PASS END=211467056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 211469818 . A . PASS END=211469818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:35,0 chr2 211469826 . G . PASS END=211469828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,119,1635:0,119,255:40,0 chr2 211469829 . T . PASS END=211469829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:75:47:0,75,1474:0,75,255:40,0 chr2 211469830 . T . PASS END=211469970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:90:40:0,90,1350:0,96,255:40,0 chr2 211471447 . A . PASS END=211471447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 211471454 . G . PASS END=211471460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:29,0 chr2 211471461 . C . PASS END=211471461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 211471462 . A . PASS END=211471654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:80:28:0,80,1125:0,80,255:40,0 chr2 211471655 . A . PASS END=211471658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 211471659 . C . PASS END=211471659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 211471660 . C . PASS END=211471665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 211471671 . A . PASS END=211471671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:60:28:0,60,900:0,68,255:19,0 chr2 211473084 . G . PASS END=211473084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 211473085 . C . PASS END=211473085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 211473086 . T . PASS END=211473107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:29:0,87,1116:0,87,255:40,0 chr2 211473108 . C . PASS END=211473284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:89:35:0,89,1294:0,89,255:40,0 chr2 211476840 . G . PASS END=211476997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:38:0,90,1350:0,114,255:40,0 chr2 211476998 . G . PASS END=211476999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:78:38:0,78,1170:0,114,255:26,0 chr2 211477000 . A . PASS END=211477001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:38:0,81,1215:0,114,255:27,0 chr2 211477002 . C . PASS END=211477015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:27:0,60,900:0,71,255:26,0 chr2 211477016 . A . PASS END=211477017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,61,255:19,0 chr2 211481147 . G . PASS END=211481219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:46:0,120,1800:0,138,255:40,0 chr2 211481220 . T . PASS END=211481256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:65:0,120,1800:0,188,255:40,0 chr2 211481257 . C G, 244.71 PASS DP=66;MQ=249.77;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,66,0:1.000,0.000:66:0,31,0:0,35,0:195:282,198,0,2455,198,2455:255,201,0:0,0:2.4471e+02,1.9471e+02,0.0000e+00,4.5000e+02,2.2948e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,20,46:0,0,35,31 chr2 211481258 . C . PASS END=211481265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:62:0,120,1800:0,170,255:40,0 chr2 211502414 . A . PASS END=211502414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 211502426 . T . PASS END=211502426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 211502427 . G . PASS END=211502428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 211502429 . G . PASS END=211502429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 211502430 . T . PASS END=211502430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 211502431 . C . PASS END=211502451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1000:0,81,255:33,0 chr2 211502452 . A . PASS END=211502452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1174:0,71,255:33,0 chr2 211502453 . A . PASS END=211502487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1232:0,81,255:37,0 chr2 211502488 . T . PASS END=211502488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:36,0 chr2 211502489 . T . PASS END=211502532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1215:0,84,255:38,0 chr2 211502533 . G . PASS END=211502533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1045:0,57,255:26,0 chr2 211502534 . G . PASS END=211502538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 211502539 . A . PASS END=211502539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 211502540 . G . PASS END=211502543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 211502544 . A . PASS END=211502554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:28:0,60,900:0,84,255:26,0 chr2 211502555 . T . PASS END=211502567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,660:0,46,255:19,0 chr2 211503874 . A . PASS END=211503939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:48:0,113,1737:0,113,255:40,0 chr2 211504720 . G . PASS END=211504783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:42:0,114,1710:0,126,255:40,0 chr2 211507208 . G . PASS END=211507390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:92:33:0,92,1249:0,92,255:40,0 chr2 211507399 . G . PASS END=211507399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 211512587 . G . PASS END=211512715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:29:0,81,1215:0,87,255:40,0 chr2 211512716 . A . PASS END=211512716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:34,0 chr2 211512717 . T . PASS END=211512736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1210:0,83,255:34,0 chr2 211512737 . G . PASS END=211512766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr2 211512767 . G . PASS END=211512782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,60,255:18,0 chr2 211513197 . A . PASS END=211513264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:64:0,120,1800:0,147,255:40,0 chr2 211515087 . T . PASS END=211515162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:64:0,120,1800:0,167,255:40,0 chr2 211515167 . T . PASS END=211515167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 211518461 . T . PASS END=211518465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 211518466 . T . PASS END=211518466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:31,0 chr2 211518467 . C . PASS END=211518470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 211518471 . T . PASS END=211518471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1015:0,63,255:28,0 chr2 211518472 . C . PASS END=211518475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:29,0 chr2 211518476 . A . PASS END=211518476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:26,0 chr2 211518477 . A . PASS END=211518477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 211518478 . T . PASS END=211518478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1048:0,76,255:28,0 chr2 211518479 . T . PASS END=211518481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1056:0,90,255:31,0 chr2 211518741 . C . PASS END=211518742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 211518749 . G . PASS END=211518827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:52:0,120,1800:0,122,255:40,2 chr2 211518833 . G . PASS END=211518834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:48:0,93,1395:0,95,255:33,0 chr2 211521247 . A . PASS END=211521247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,894:0,64,255:26,0 chr2 211521249 . G . PASS END=211521249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:32,0 chr2 211521250 . T . PASS END=211521251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1127:0,85,255:32,0 chr2 211521252 . A . PASS END=211521252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1086:0,69,255:31,0 chr2 211521253 . T . PASS END=211521274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:33:0,91,1227:0,91,255:40,0 chr2 211521275 . T . PASS END=211521275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1421:0,68,255:40,0 chr2 211521276 . G . PASS END=211521280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 211521281 . A . PASS END=211521336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:96:38:0,96,1275:0,100,255:40,0 chr2 211521337 . G . PASS END=211521337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1264:0,59,255:30,0 chr2 211521338 . C . PASS END=211521350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:33:0,87,1250:0,94,255:33,0 chr2 211521351 . G . PASS END=211521351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1103:0,69,255:28,0 chr2 211521352 . A . PASS END=211521355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:29,0 chr2 211521356 . G . PASS END=211521356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 211523323 . G . PASS END=211523412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:53:0,120,1800:0,124,255:40,0 chr2 211525209 . G . PASS END=211525361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:33:0,84,1260:0,99,255:40,0 chr2 211525362 . G . PASS END=211525376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:25,0 chr2 211525377 . A . PASS END=211525377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 211525378 . A . PASS END=211525379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 211527847 . G . PASS END=211527873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:44:0,114,1577:0,114,255:40,0 chr2 211527874 . A . PASS END=211527921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:50:0,89,1729:0,89,255:40,0 chr2 211527923 . T . PASS END=211527923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 211532908 . A . PASS END=211533008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,142,255:40,0 chr2 211533010 . T . PASS END=211533010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 211539626 . C . PASS END=211539685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:80:0,120,1800:0,169,255:40,0 chr2 211540452 . C . PASS END=211540470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,515:0,48,255:19,0 chr2 211540471 . C . PASS END=211540477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 211540478 . C . PASS END=211540479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 211540480 . G . PASS END=211540490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 211540491 . A . PASS END=211540530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,44,255:19,0 chr2 211540531 . A . PASS END=211540544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 211540545 . A . PASS END=211540564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 211540566 . T . PASS END=211540566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 211541731 . A . PASS END=211541860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:49:0,120,1800:0,130,255:40,0 chr2 211541865 . A . PASS END=211541865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,226,255:40,0 chr2 211542611 . G . PASS END=211542709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:51:0,120,1800:0,139,255:40,0 chr2 211542714 . G . PASS END=211542714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,225,255:40,0 chr2 211542783 . T . PASS END=211542783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 211542896 . C . PASS END=211542896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,120,255:33,0 chr2 211542944 . A . PASS END=211542944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 211542983 . G . PASS END=211542983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 211543020 . A . PASS END=211543020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,120,1800:0,126,255:40,0 chr2 211543096 . C . PASS END=211543096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 211543133 . A . PASS END=211543133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 211543136 . C . PASS END=211543136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 211543448 . T . PASS END=211543448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1527:0,120,255:40,0 chr2 211543456 . A . PASS END=211543456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 211543486 . A . PASS END=211543486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 211543517 . G . PASS END=211543517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 211543557 . G . PASS END=211543557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 211543622 . G . PASS END=211543622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 211543685 . C . PASS END=211543685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 211543749 . C . PASS END=211543749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1421:0,117,255:39,0 chr2 211543777 . G . PASS END=211543777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 211543796 . T . PASS END=211543796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 211543826 . A . PASS END=211543826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:69:30:0,69,1035:0,74,255:22,0 chr2 212248340 . T . PASS END=212248349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:24,0 chr2 212248350 . G . PASS END=212248785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:29:0,87,1009:0,87,255:40,2 chr2 212251578 . C . PASS END=212251578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:14,0 chr2 212251579 . T . PASS END=212251585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 212251586 . G . PASS END=212251586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 212251587 . G . PASS END=212251587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 212251588 . T . PASS END=212251588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,496:0,21,255:16,0 chr2 212251589 . T . PASS END=212251591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 212251592 . T . PASS END=212251592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 212251593 . C . PASS END=212251605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,607:0,41,255:19,0 chr2 212251606 . C . PASS END=212251622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,839:0,63,255:25,0 chr2 212251623 . C . PASS END=212251623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:24,0 chr2 212251624 . C . PASS END=212251638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,931:0,75,255:25,0 chr2 212251639 . G . PASS END=212251826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1060:0,82,255:40,0 chr2 212251827 . A . PASS END=212251850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1116:0,87,255:30,0 chr2 212251851 . C . PASS END=212251863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,68,255:26,0 chr2 212251864 . T C, 41.68 PASS DP=26;MQ=250.00;MQRankSum=3.972;ReadPosRankSum=2.472;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,8,0:0.308,0.000:26:4,4,0:14,4,0:41:76,0,50,286,606,892:232,0,255:14,0:4.1680e+01,3.1660e-04,5.3000e+01,2.8617e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,2,6:8,10,4,4 chr2 212251865 . A . PASS END=212251875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,66,255:19,0 chr2 212252670 . T . PASS END=212252717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,153,255:40,0 chr2 212285166 . C . PASS END=212285323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:33:0,81,1215:0,99,255:40,0 chr2 212285324 . T . PASS END=212285336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,67,255:25,0 chr2 212286732 . C . PASS END=212286829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:54:0,120,1800:0,149,255:40,0 chr2 212288880 . A . PASS END=212289026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:84:39:0,84,1260:0,97,255:40,0 chr2 212293133 . C . PASS END=212293208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:56:0,120,1800:0,140,255:40,0 chr2 212295670 . C . PASS END=212295686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:29:0,84,1197:0,87,255:38,0 chr2 212295687 . T . PASS END=212295687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:37,0 chr2 212295688 . G . PASS END=212295814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:41:0,81,1215:0,107,255:40,0 chr2 212295815 . T . PASS END=212295825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:72:29:0,72,1080:0,87,255:26,0 chr2 212426628 . C . PASS END=212426787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:36:0,87,1220:0,108,255:40,0 chr2 212426788 . T . PASS END=212426813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 212483902 . A . PASS END=212484000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:44:0,114,1710:0,132,255:40,0 chr2 212488647 . T . PASS END=212488769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:35:0,87,1305:0,88,255:40,0 chr2 212495187 . C . PASS END=212495286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:54:0,120,1800:0,146,255:40,0 chr2 212495287 . C . PASS END=212495319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:91:45:0,91,1620:0,91,255:40,0 chr2 212522479 . C . PASS END=212522553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:46:0,120,1800:0,128,255:40,0 chr2 212522675 . C . PASS END=212522719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:60:0,120,1800:0,156,255:40,0 chr2 212530048 . C . PASS END=212530190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:84:44:0,84,1260:0,124,255:40,0 chr2 212530191 . G . PASS END=212530202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:66:28:0,66,990:0,77,255:26,0 chr2 212537889 . C . PASS END=212537982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:46:0,120,1800:0,138,255:40,2 chr2 212543777 . C . PASS END=212543778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 212543779 . A . PASS END=212543783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:31,0 chr2 212543784 . A . PASS END=212543784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 212543785 . G . PASS END=212543886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:89:31:0,89,1119:0,89,255:40,0 chr2 212543887 . G . PASS END=212543909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:39:0,80,1395:0,80,255:40,0 chr2 212566692 . T . PASS END=212566884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:93:43:0,93,1395:0,95,255:40,0 chr2 212566885 . C . PASS END=212566888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:35:0,63,945:0,89,255:21,0 chr2 212566889 . C . PASS END=212566891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:54:34:0,54,810:0,102,255:19,0 chr2 212568829 . C . PASS END=212568919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:46:0,111,1665:0,122,255:40,0 chr2 212570043 . C . PASS END=212570116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:92:36:0,92,1272:0,92,255:40,0 chr2 212576775 . C . PASS END=212576901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:46:0,120,1800:0,138,255:40,0 chr2 212578260 . C . PASS END=212578334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:52:0,120,1800:0,140,255:40,0 chr2 212578335 . A . PASS END=212578373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:99:55:0,108,1620:0,118,255:40,0 chr2 212587118 . G . PASS END=212587259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:36:0,105,1365:0,108,255:40,0 chr2 212589801 . A . PASS END=212589919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:36:0,98,1349:0,98,255:40,0 chr2 212598966 . T . PASS END=212598966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:111,1:112:99:112:0,120,1800:0,255,255:40,0 chr2 212615364 . A . PASS END=212615429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:53:0,120,1800:0,150,255:40,0 chr2 212646183 . C . PASS END=212646260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,153,255:40,0 chr2 212652750 . A . PASS END=212652856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,111,1665:0,120,255:40,0 chr2 212652857 . T . PASS END=212652857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:78:51:0,78,1170:0,153,255:26,0 chr2 212652858 . C . PASS END=212652859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:50:0,81,1215:0,150,255:27,0 chr2 212652860 . A . PASS END=212652876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:60:24:0,60,900:0,64,255:26,0 chr2 212652877 . T . PASS END=212652884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,66,255:19,0 chr2 212812155 . C . PASS END=212812330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:35:0,93,1395:0,100,255:40,0 chr2 212812331 . T . PASS END=212812331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1120:0,74,255:30,0 chr2 212812332 . C . PASS END=212812341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:90:34:0,90,1197:0,91,255:32,0 chr2 212989477 . C . PASS END=212989632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:41:0,107,1459:0,107,255:40,0 chr2 213403173 . C . PASS END=213403178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,540:0,51,255:17,0 chr2 213403179 . G . PASS END=213403179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 213403180 . A . PASS END=213403186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:19,0 chr2 213403187 . C . PASS END=213403187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:17,0 chr2 213403188 . T . PASS END=213403188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,670:0,57,255:19,0 chr2 213403189 . G . PASS END=213403191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 213403192 . C . PASS END=213403192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr2 213403193 . T . PASS END=213403204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,678:0,60,255:22,0 chr2 213403205 . G . PASS END=213403205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,674:0,11,255:20,0 chr2 213403206 . C . PASS END=213403220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:22,0 chr2 213403221 . T . PASS END=213403221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:19,0 chr2 213403222 . C . PASS END=213403222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 213403223 . A . PASS END=213403223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 213403224 . C . PASS END=213403227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 213403228 . G . PASS END=213403236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:18,0 chr2 213403237 . T . PASS END=213403237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:18,0 chr2 213403238 . C . PASS END=213403250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:18,0 chr2 213403251 . T . PASS END=213403251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 213403252 . C . PASS END=213403254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 213872084 . C . PASS END=213872347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:83:33:0,83,1114:0,83,255:40,0 chr2 213872348 . C . PASS END=213872348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:78:54:0,78,1443:0,78,255:40,0 chr2 213872349 . T . PASS END=213872440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:40:0,81,1389:0,81,255:40,0 chr2 213872441 . A . PASS END=213872441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr2 213872442 . G . PASS END=213872453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:38:0,81,1305:0,81,255:37,0 chr2 213872454 . C . PASS END=213872458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:69:36:0,69,1296:0,69,255:33,0 chr2 213872459 . A . PASS END=213872459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:96:39:0,96,1440:0,101,255:31,0 chr2 213872460 . T . PASS END=213872461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:32,0 chr2 213872462 . G . PASS END=213872463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:34,0 chr2 213872464 . T . PASS END=213872469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:72:37:0,72,1296:0,72,255:34,0 chr2 213872470 . A . PASS END=213872476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:35:0,102,1351:0,105,255:37,0 chr2 213872477 . T . PASS END=213872477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:44:38:0,44,1017:0,44,255:35,0 chr2 213872478 . C . PASS END=213872623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:31:0,81,1215:0,86,255:39,0 chr2 213872624 . C . PASS END=213872624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 213872625 . A . PASS END=213872651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1186:0,83,255:34,0 chr2 213872652 . T . PASS END=213872654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 213872655 . A . PASS END=213872658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:28,0 chr2 213872659 . G . PASS END=213872659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 213872660 . A . PASS END=213872681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:30,0 chr2 213872682 . A . PASS END=213872682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,967:0,79,255:30,0 chr2 213872683 . G . PASS END=213872713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 213872714 . C . PASS END=213872715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:26,0 chr2 213872716 . T . PASS END=213872727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1202:0,93,255:31,0 chr2 213872728 . G . PASS END=213872728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 213872729 . C . PASS END=213872752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:31:0,90,1172:0,93,255:34,0 chr2 213872753 . T . PASS END=213872753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1208:0,58,255:29,0 chr2 213872754 . G . PASS END=213872773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1141:0,83,255:30,0 chr2 213872774 . A . PASS END=213872775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 213872776 . T . PASS END=213872778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 213872779 . C . PASS END=213872779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 213872780 . T . PASS END=213872781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 213872782 . G . PASS END=213872783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1131:0,77,255:27,0 chr2 213872784 . T . PASS END=213872789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 213872790 . A . PASS END=213872791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 213872792 . T . PASS END=213872793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 213872794 . G . PASS END=213872798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:63:30:0,63,945:0,74,255:27,0 chr2 213872799 . A . PASS END=213872808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:26:0,48,720:0,78,255:19,0 chr2 213878515 . C . PASS END=213878658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:93:40:0,93,1395:0,110,255:40,0 chr2 213886437 . C . PASS END=213886441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 213886442 . T . PASS END=213886444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 213886717 . C . PASS END=213886842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:32:0,85,1143:0,85,255:40,0 chr2 213886843 . G . PASS END=213886848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:32:0,78,1170:0,79,255:26,0 chr2 213886849 . T . PASS END=213886851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 213886852 . C . PASS END=213886854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:28:0,72,1080:0,84,255:25,0 chr2 213914437 . C . PASS END=213914441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,809:0,69,255:23,0 chr2 213914442 . T . PASS END=213914442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 213914443 . G . PASS END=213914444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 213914445 . G . PASS END=213914449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 213914450 . G . PASS END=213914450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:29,0 chr2 213914451 . A . PASS END=213914578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1260:0,80,255:40,0 chr2 213914579 . C . PASS END=213914593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:26:0,63,945:0,74,255:26,0 chr2 213914594 . G . PASS END=213914595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 213914596 . G . PASS END=213914599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:20,0 chr2 213914600 . T . PASS END=213914603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 213914604 . C . PASS END=213914604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 213921428 . C . PASS END=213921468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:48:0,120,1800:0,133,255:40,0 chr2 213921557 . C . PASS END=213921782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:31:0,80,1111:0,80,255:40,0 chr2 213921783 . A . PASS END=213921798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:21:0,60,900:0,63,255:21,0 chr2 213921799 . T . PASS END=213921810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:19:0,43,668:0,43,255:18,0 chr2 213921811 . T . PASS END=213921811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,561:0,23,255:15,0 chr2 213921812 . T . PASS END=213921823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:16,0 chr2 213962665 . C . PASS END=213962684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:52:0,120,1800:0,120,255:40,0 chr2 214012195 . C . PASS END=214012202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,808:0,66,255:24,0 chr2 214012203 . G . PASS END=214012261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:35:0,101,1316:0,101,255:40,0 chr2 214012310 . T . PASS END=214012367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:66:0,120,1800:0,185,255:40,0 chr2 214012368 . A . PASS END=214012402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:96:0,120,1800:0,245,255:40,1 chr2 214012403 . C . PASS END=214012403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,6:100:72:100:0,72,3333:0,72,255:40,10 chr2 214012404 . A . LowGQ END=214012404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,10:103:0:103:0,0,3181:38,0,255:40,10 chr2 214012405 . A C, 260.37 PASS DP=100;MQ=250.00;MQRankSum=4.072;ReadPosRankSum=-0.799;FractionInformativeReads=0.920;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:6,86,0:0.935,0.000:92:4,41,0:2,45,0:210:298,213,0,398,398,398:255,255,0:0,10:2.6037e+02,2.1037e+02,0.0000e+00,3.9514e+02,4.2990e+02,3.9815e+02:0.00,34.77,37.78,34.77,69.54,37.78:3,3,37,49:3,3,42,44 chr2 214012406 . A . PASS END=214012406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,6:101:71:101:0,71,3323:0,71,255:40,0 chr2 214012407 . A . PASS END=214012442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:96:0,120,1800:0,249,255:40,0 chr2 214012443 . T . PASS END=214012470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,1:97:99:94:0,120,1800:0,255,255:40,0 chr2 214012471 . G . PASS END=214012507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:73:0,120,1800:0,219,255:40,0 chr2 214012508 . C T, 50.00 PASS DP=72;MQ=250.00;MQRankSum=7.292;ReadPosRankSum=3.835;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,36,0:0.500,0.000:72:19,21,0:17,15,0:48:85,0,50,1193,1287,2481:255,0,255:31,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,24,20,16:19,17,21,15 chr2 214012509 . T . PASS END=214012539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,164,255:40,0 chr2 214013320 . A . PASS END=214013368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:74:0,120,1800:0,222,255:40,0 chr2 214014905 . C . PASS END=214014907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:65:0,120,1800:0,182,255:40,0 chr2 214142441 . T . PASS END=214142449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 214142450 . T . PASS END=214142450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 214142451 . T . PASS END=214142451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 214142452 . C . PASS END=214142457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr2 214142458 . T . PASS END=214142458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 214142459 . A . PASS END=214142461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 214142462 . A . PASS END=214142462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 214142463 . G . PASS END=214142485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,592:0,51,255:19,0 chr2 214142486 . G . PASS END=214142486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,649:0,27,255:15,0 chr2 214142487 . A . PASS END=214142497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,615:0,51,255:19,0 chr2 214142498 . C . PASS END=214142507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,707:0,60,255:24,0 chr2 214142508 . T . PASS END=214142508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:22,0 chr2 214142509 . G . PASS END=214142510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,930:0,72,255:25,0 chr2 214142511 . T . PASS END=214142542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:27:0,80,994:0,80,255:33,0 chr2 214142543 . A . PASS END=214142543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr2 214142544 . T . PASS END=214142593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:37:0,104,1374:0,104,255:40,0 chr2 214142594 . T . PASS END=214142630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,2:50:99:46:0,111,1665:0,112,255:40,1 chr2 214142631 . G C, 188.45 PASS DP=47;MQ=238.66;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,47,0:1.000,0.000:47:0,20,0:0,27,0:138:226,141,0,1806,141,1806:255,141,0:0,0:1.8845e+02,1.3845e+02,0.0000e+00,4.5000e+02,1.7322e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,33:0,0,23,24 chr2 214142632 . A . PASS END=214142654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,101,255:39,0 chr2 214142655 . T . PASS END=214142665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:27:0,63,915:0,64,255:23,0 chr2 214148757 . C . PASS END=214148802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:58:0,120,1800:0,158,255:40,0 chr2 214149208 . A . PASS END=214149227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,793:0,69,255:26,0 chr2 214149228 . G . PASS END=214149290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:27:0,80,1008:0,80,255:40,0 chr2 214149291 . C . PASS END=214149291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:36,0 chr2 214149292 . G . PASS END=214149343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:38:0,105,1476:0,106,255:40,0 chr2 214149386 . A . PASS END=214149475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:81:30:0,81,1215:0,87,255:40,0 chr2 214150610 . C . PASS END=214150642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:97:42:0,97,1621:0,97,255:40,0 chr2 214160764 . A . PASS END=214160768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,155,255:40,0 chr2 214160788 . A . PASS END=214160846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:75:0,120,1800:0,196,255:40,0 chr2 214161746 . A . PASS END=214161772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,1:87:99:81:0,120,1800:0,223,255:40,0 chr2 214161773 . C T, 49.64 PASS DP=94;MQ=250.00;MQRankSum=8.331;ReadPosRankSum=5.073;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:50,44,0:0.468,0.000:94:30,21,0:20,23,0:48:84,0,50,1446,1691,3137:255,0,255:40,0:4.9639e+01,6.8857e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:28,22,27,17:26,24,22,22 chr2 214161774 . T . PASS END=214161848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:88:0,120,1800:0,238,255:40,0 chr2 214161849 . C T, 48.93 PASS DP=108;MQ=250.00;MQRankSum=8.900;ReadPosRankSum=7.225;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:60,48,0:0.444,0.000:108:28,18,0:32,30,0:47:84,0,50,1672,2101,3773:255,0,255:40,0:4.8927e+01,7.7400e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:29,31,20,28:23,37,22,26 chr2 214161850 . T . PASS END=214161863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:109,0:109:99:108:0,120,1800:0,253,255:40,0 chr2 214161986 . A . PASS END=214162081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,0:84:99:56:0,120,1800:0,151,255:40,0 chr2 214174783 . G . PASS END=214174804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,153,255:40,0 chr2 214174805 . C . PASS END=214174901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,114,1710:0,128,255:40,0 chr2 214181943 . G . PASS END=214182062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:69:0,120,1800:0,200,255:40,0 chr2 214182063 . C . PASS END=214182096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:59:0,120,1800:0,152,255:40,0 chr2 214204887 . C . PASS END=214204994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:41:0,105,1552:0,105,255:40,0 chr2 214215252 . G . PASS END=214215253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1081:0,96,255:32,0 chr2 214215254 . T . PASS END=214215254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr2 214215255 . G . PASS END=214215280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1169:0,80,255:40,0 chr2 214215281 . C . PASS END=214215281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1518:0,74,255:40,0 chr2 214215282 . G . PASS END=214215300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,120,1800:0,122,255:40,0 chr2 214215301 . G . PASS END=214215337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,143,255:40,0 chr2 214215338 . C T, 46.50 PASS DP=51;MQ=248.99;MQRankSum=5.931;ReadPosRankSum=3.079;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,20,0:0.400,0.000:50:12,6,0:18,14,0:46:81,0,50,702,1073,1775:255,0,255:29,0:4.6502e+01,1.1882e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,18,14,6:26,4,8,12 chr2 214215339 . C . PASS END=214215366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:39:0,102,1530:0,117,255:40,0 chr2 214215367 . C . PASS END=214215369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:66:37:0,66,990:0,111,255:23,0 chr2 214228800 . A . PASS END=214228829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,116,1628:0,116,255:40,0 chr2 214228830 . C . PASS END=214228886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,129,255:40,0 chr2 214239734 . T . PASS END=214239843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:33:0,93,1150:0,93,255:40,0 chr2 214239932 . G . PASS END=214239943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,154,255:40,0 chr2 214240869 . A . PASS END=214240874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,2:80:99:77:0,120,1800:0,207,255:40,0 chr2 214240875 . G A, 50.00 PASS DP=79;MQ=250.00;MQRankSum=7.629;ReadPosRankSum=3.954;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,42,0:0.532,0.000:79:20,19,0:17,23,0:48:85,0,50,1407,1277,2684:255,0,255:34,0:5.0000e+01,6.6786e-05,5.2700e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:21,16,23,19:18,19,16,26 chr2 214240876 . T . PASS END=214240904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:78:0,120,1800:0,234,255:40,0 chr2 214261231 . G . PASS END=214261232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 214261233 . C . PASS END=214261233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 214261234 . T . PASS END=214261408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:81:31:0,81,1141:0,83,255:40,0 chr2 214261409 . T . PASS END=214261416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:63:34:0,63,945:0,102,255:23,0 chr2 214286877 . G . PASS END=214286889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 214286890 . C . PASS END=214286892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 214286893 . T . PASS END=214286893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 214286894 . C . PASS END=214286899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:15:0,41,574:0,41,255:18,0 chr2 214286900 . G . PASS END=214286909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,768:0,63,255:23,0 chr2 214286910 . A . PASS END=214286910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 214286911 . G . PASS END=214286913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 214286914 . G . PASS END=214286914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 214286915 . C . PASS END=214286921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,878:0,75,255:26,0 chr2 214286922 . A . PASS END=214287044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:29:0,86,1041:0,86,255:40,0 chr2 214329163 . A . PASS END=214329186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:97:38:0,97,1297:0,97,255:39,0 chr2 214354687 . G . PASS END=214354814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,0:90:99:55:0,112,1800:0,112,255:40,0 chr2 214368065 . T . PASS END=214368077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:85:0,120,1800:0,238,255:40,0 chr2 214476117 . G . PASS END=214476144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:107,1:108:99:105:0,120,1800:0,255,255:40,0 chr2 214568214 . A . PASS END=214568214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,199,255:40,0 chr2 214723037 . A . PASS END=214723037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,1:79:99:79:0,120,1800:0,221,255:40,0 chr2 214727209 . T . PASS END=214727350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:27:0,81,1024:0,81,255:40,0 chr2 214727351 . A . PASS END=214727351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:67:38:0,67,1294:0,67,255:28,0 chr2 214727352 . G . PASS END=214727352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:37:0,87,1305:0,111,255:29,0 chr2 214794684 . T . PASS END=214794700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,840:0,61,255:25,0 chr2 214794701 . C . PASS END=214794701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1008:0,35,255:26,1 chr2 214794702 . T . PASS END=214794703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,998:0,49,255:27,1 chr2 214794704 . C . PASS END=214794710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:30,0 chr2 214794711 . T . PASS END=214794711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 214794712 . G . PASS END=214794829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1010:0,80,255:40,0 chr2 214794830 . C . PASS END=214794860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,811:0,61,255:26,0 chr2 214794861 . T . PASS END=214794861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:20,0 chr2 214794862 . G . PASS END=214794864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 214794865 . A . PASS END=214794865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 214794866 . A . PASS END=214794869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 214878675 . T . PASS END=214878801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:93:40:0,93,1395:0,120,255:40,0 chr2 214927414 . T . PASS END=214927414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,4:76:99:76:0,120,1800:0,161,255:40,0 chr2 214927415 . C . LowGQ END=214927415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,10:76:0:76:0,0,1902:5,0,255:40,0 chr2 214927416 . T . PASS END=214927416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,6:76:99:76:0,120,1800:0,128,255:40,0 chr2 214927417 . C . PASS END=214927417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,12:78:20:78:0,20,2003:0,20,255:40,0 chr2 214927418 . T . PASS END=214927422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,4:78:90:78:0,90,1800:0,90,255:40,0 chr2 214927423 . T . PASS END=214927423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,10:79:70:79:0,70,2026:0,70,255:40,0 chr2 214927424 . C . PASS END=214927429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,7:81:93:81:0,93,1800:0,93,255:40,0 chr2 214927430 . G . LowGQ END=214927430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,10:83:0:83:0,0,2238:12,0,255:40,0 chr2 214927431 . T . PASS END=214927434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:83:0,120,1800:0,121,255:40,0 chr2 214927435 . A . PASS END=214927435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,5:83:78:83:0,78,2703:0,78,255:40,0 chr2 214927436 . T . PASS END=214927436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,10:83:24:83:0,24,2261:0,24,255:40,0 chr2 214927437 . C . LowGQ END=214927437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,11:83:0:83:0,0,2280:36,0,255:40,0 chr2 214927438 . T . PASS END=214927438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,7:83:52:83:0,52,2501:0,52,255:40,0 chr2 214927439 . C . PASS END=214927439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,8:82:77:82:0,77,2567:0,77,255:40,0 chr2 214927440 . G . PASS END=214927449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,5:82:80:82:0,80,1800:0,80,255:40,0 chr2 214972920 . G . PASS END=214972985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:48:0,120,1800:0,144,255:40,0 chr2 215013864 . G . PASS END=215013990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:43:0,100,1487:0,100,255:40,0 chr2 215014903 . T . PASS END=215014916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:97:0,120,1800:0,255,255:40,0 chr2 215015600 . G . PASS END=215015658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:74:0,120,1800:0,189,255:40,0 chr2 215057146 . A . PASS END=215057174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,1:89:99:87:0,120,1800:0,234,255:40,0 chr2 215102860 . A . PASS END=215102883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,147,255:40,0 chr2 215102884 . T C, 50.00 PASS DP=76;MQ=250.00;MQRankSum=7.413;ReadPosRankSum=2.911;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,41,0:0.547,0.000:75:15,19,0:19,22,0:48:85,0,49,1372,1171,2543:255,0,255:33,0:5.0000e+01,6.8857e-05,5.2322e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,18,22,19:19,15,24,17 chr2 215102885 . A . PASS END=215102918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,144,255:40,0 chr2 215274864 . G . PASS END=215274864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 215274865 . T . PASS END=215274866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,953:0,65,255:26,0 chr2 215274867 . G . PASS END=215274867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 215274868 . A . PASS END=215274869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,1014:0,68,255:29,0 chr2 215274870 . T . PASS END=215274875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:30:0,80,1096:0,80,255:30,0 chr2 215274876 . C . PASS END=215274876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1025:0,63,255:29,0 chr2 215274877 . T . PASS END=215274877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 215274878 . C . PASS END=215274878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 215274879 . A . PASS END=215274880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1350:0,96,255:34,0 chr2 215274881 . G . PASS END=215274881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1225:0,75,255:32,0 chr2 215274882 . C . PASS END=215274988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:92:35:0,92,1280:0,92,255:40,0 chr2 215274989 . G . PASS END=215275025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:35:0,84,1260:0,92,255:40,0 chr2 215275026 . G A, 49.07 PASS DP=34;MQ=250.00;MQRankSum=4.925;ReadPosRankSum=-0.486;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,15,0:0.441,0.000:34:11,7,0:8,8,0:48:84,0,50,528,643,1171:255,0,255:18,0:4.9072e+01,7.5588e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,12,3,12:9,10,7,8 chr2 215275027 . A . PASS END=215275029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,85,255:28,0 chr2 215275030 . G . PASS END=215275030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 215275031 . T . PASS END=215275031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 215275032 . G . PASS END=215275039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,900:0,73,255:24,0 chr2 215278918 . A . PASS END=215278937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:15:0,41,599:0,41,255:18,0 chr2 215278938 . A . PASS END=215278959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,744:0,63,255:24,0 chr2 215278960 . A . PASS END=215278960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:23,0 chr2 215278961 . T . PASS END=215279288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:33:0,93,1235:0,99,255:40,0 chr2 215279289 . A . PASS END=215279289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1040:0,55,255:29,0 chr2 215279290 . A . PASS END=215279307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1227:0,88,255:32,0 chr2 215301353 . C . PASS END=215301482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:91:36:0,91,1197:0,91,255:40,0 chr2 215440396 . G . PASS END=215440533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:85:39:0,85,1459:0,85,255:40,0 chr2 215440534 . A . PASS END=215440544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:60:43:0,60,900:0,125,255:23,0 chr2 215592715 . A . PASS END=215592715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 215593261 . CTTT CT,C,CTTTT,CTTTTT, 77.58 PASS DP=40;MQ=249.35;MQRankSum=3.196;ReadPosRankSum=0.327;FractionInformativeReads=0.900;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 3/4:4,2,1,15,14,0:0.056,0.028,0.417,0.389,0.000:36:1,1,0,8,10,0:3,1,1,7,4,0:11:95,217,121,234,604,135,41,65,79,16,36,91,113,0,56,704,704,704,704,704,704:255,0,245:5,43:7.7585e+01,2.0842e+02,1.1503e+02,2.2499e+02,4.5000e+02,1.2985e+02,3.2066e+01,6.5026e+01,7.9853e+01,1.0633e+01,2.7585e+01,9.1443e+01,1.1373e+02,4.0392e-01,5.0404e+01,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02,4.5000e+02:0.00,9.00,12.01,9.00,18.00,12.01,9.00,18.00,18.00,12.01,9.00,18.00,18.00,18.00,12.01,34.77,43.77,43.77,43.77,43.77,37.78:3,1,20,12:2,2,21,11 chr2 215593362 . G . PASS END=215593362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 215593388 . C . PASS END=215593388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 215593400 . T . PASS END=215593735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:29:0,84,1094:0,87,255:40,0 chr2 215593744 . A . PASS END=215593744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 215594969 . T . PASS END=215595004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:69:0,120,1800:0,161,255:40,0 chr2 215595082 . A . PASS END=215595082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:99,1:100:99:100:0,120,1800:0,255,255:40,0 chr2 215595128 . A . PASS END=215595129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:93:0,120,1800:0,255,255:40,0 chr2 215595132 . T . PASS END=215595132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:98,0:98:99:98:0,120,1800:0,255,255:40,0 chr2 215595134 . C . PASS END=215595235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:101,0:101:99:71:0,120,1800:0,209,255:40,0 chr2 215595237 . C . PASS END=215595237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 215595241 . A . PASS END=215595242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:70:0,120,1800:0,210,255:40,0 chr2 215595249 . A . PASS END=215595249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 215603820 . C . PASS END=215603833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 215603834 . C . PASS END=215603835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 215603836 . G . PASS END=215603845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,976:0,65,255:26,0 chr2 215609050 . C . PASS END=215609050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:70:0,120,1800:0,210,255:40,0 chr2 215609785 . A . PASS END=215609785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:69:0,120,1800:0,207,255:40,0 chr2 215609787 . T . PASS END=215609885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:49:0,120,1800:0,141,255:40,1 chr2 215610443 . C . PASS END=215610466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:46:0,99,1623:0,99,255:40,1 chr2 215610467 . A . PASS END=215610468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,3:60:67:60:0,67,1887:0,67,255:40,4 chr2 215610469 . T . PASS END=215610578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:80:36:0,80,1215:0,80,255:40,0 chr2 215610580 . T . PASS END=215610580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:28,0 chr2 215610581 . G . PASS END=215610581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 215617163 . A . PASS END=215617163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 215617165 . A . PASS END=215617166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1496:0,117,255:39,0 chr2 215617168 . T . PASS END=215617168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1465:0,82,255:39,0 chr2 215617170 . C . PASS END=215617282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:47:0,107,1676:0,107,255:40,0 chr2 215617284 . T . PASS END=215617284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 215617286 . A . PASS END=215617286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 215617288 . A . PASS END=215617288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 215617291 . A . PASS END=215617292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 215632191 . C . PASS END=215632191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 215632200 . A . PASS END=215632200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,117,1755:0,123,255:39,0 chr2 215632202 . T . PASS END=215632204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 215632206 . A . PASS END=215632254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:40:0,117,1755:0,120,255:40,0 chr2 215632255 . C T, 49.38 PASS DP=67;MQ=249.99;MQRankSum=6.525;ReadPosRankSum=2.314;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:37,30,0:0.448,0.000:67:19,20,0:18,10,0:47:84,0,47,184,184,184:255,0,255:35,0:4.9375e+01,9.3449e-05,5.0000e+01,1.8415e+02,2.1892e+02,1.8716e+02:0.00,34.77,37.78,34.77,69.54,37.78:24,13,21,9:16,21,15,15:215632255 chr2 215632256 . A G, 49.38 PASS DP=67;MQ=249.99;MQRankSum=6.525;ReadPosRankSum=2.352;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|1:37,30,0:0.448,0.000:67:19,20,0:18,10,0:47:84,0,47,184,184,184:255,0,255:35,0:4.9375e+01,9.3449e-05,5.0000e+01,1.8415e+02,2.1892e+02,1.8716e+02:0.00,34.77,37.78,34.77,69.54,37.78:24,13,21,9:16,21,15,15:215632255 chr2 215632257 . T . PASS END=215632298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:67:0,120,1800:0,194,255:40,0 chr2 215632299 . T . PASS END=215632368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:89:35:0,89,1270:0,89,255:40,0 chr2 215632369 . A . PASS END=215632371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1188:0,63,255:28,0 chr2 215632372 . C . PASS END=215632378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 215632381 . A . PASS END=215632381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 215632383 . T . PASS END=215632383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 215632386 . A . PASS END=215632386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 215633935 . G . PASS END=215633935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 215633942 . A . PASS END=215633942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 215633952 . C . PASS END=215633952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 215633954 . A . PASS END=215633954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,183,255:40,0 chr2 215633956 . C . PASS END=215634017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:62:0,120,1800:0,177,255:40,0 chr2 215634018 . C . PASS END=215634038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:47:0,120,1800:0,141,255:40,0 chr2 215634040 . G . PASS END=215634040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 215634044 . A . PASS END=215634044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 215635429 . T . PASS END=215635431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr2 215635432 . C . PASS END=215635432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 215635433 . T . PASS END=215635433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 215635434 . T . PASS END=215635439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 215635440 . C . PASS END=215635440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr2 215635441 . T . PASS END=215635448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,948:0,81,255:29,0 chr2 215635449 . A . PASS END=215635449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 215635450 . G . PASS END=215635450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 215635451 . T . PASS END=215635453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 215635454 . G . PASS END=215635454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1014:0,54,255:25,0 chr2 215635455 . A . PASS END=215635458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:26,0 chr2 215635459 . A . PASS END=215635460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 215635461 . A . PASS END=215635473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:27,0 chr2 215635474 . T . PASS END=215635479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:29,0 chr2 215635480 . G . PASS END=215635480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 215635481 . C . PASS END=215635483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr2 215635484 . G . PASS END=215635484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 215635485 . C . PASS END=215635494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1111:0,90,255:30,0 chr2 215635495 . A . PASS END=215635495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 215635496 . G . PASS END=215635505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 215635506 . G . PASS END=215635535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 215635536 . G . PASS END=215635569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,560:0,45,255:18,0 chr2 215645270 . A . PASS END=215645270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 215645276 . C . PASS END=215645276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 215645278 . T . PASS END=215645280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:37,0 chr2 215645283 . C . PASS END=215645426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:42:0,99,1615:0,99,255:40,0 chr2 215645427 . A . PASS END=215645463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,146,255:40,0 chr2 215645464 . C G, 50.00 PASS DP=58;MQ=250.00;MQRankSum=6.433;ReadPosRankSum=2.313;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:24,34,0:0.586,0.000:58:12,19,0:12,15,0:47:85,0,47,1185,835,2019:255,0,255:24,0:5.0000e+01,8.2059e-05,5.0494e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,10,18,16:14,10,19,15 chr2 215645465 . C . PASS END=215645501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:53:0,115,1716:0,115,255:40,0 chr2 215645502 . G . PASS END=215645553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:36:0,96,1335:0,100,255:40,0 chr2 215645554 . A . PASS END=215645554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1303:0,70,255:33,0 chr2 215645555 . A . PASS END=215645582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:36:0,96,1410:0,101,255:36,0 chr2 215645583 . T . PASS END=215645583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:31,0 chr2 215645584 . G . PASS END=215645649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:31:0,90,1105:0,93,255:37,0 chr2 215645650 . T . PASS END=215645650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:29,0 chr2 215645651 . A . PASS END=215645735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:32:0,91,1243:0,91,255:40,0 chr2 215645736 . A . PASS END=215645736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:77:49:0,77,1579:0,77,255:40,0 chr2 215645737 . C . PASS END=215646234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:42:0,102,1504:0,102,255:40,2 chr2 215646236 . G . PASS END=215646237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 215646240 . G . PASS END=215646240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 215657014 . T . PASS END=215657014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 215657018 . T . PASS END=215657018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 215657021 . C . PASS END=215657137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:45:0,120,1800:0,134,255:40,0 chr2 215657138 . A . PASS END=215657155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:44:0,87,1305:0,116,255:40,0 chr2 215657156 . C . PASS END=215657169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:63:37:0,63,945:0,87,255:26,0 chr2 215657170 . C . PASS END=215657170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:54:37:0,54,810:0,78,255:16,0 chr2 215657172 . T . PASS END=215657173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:51:36:0,51,765:0,75,255:18,0 chr2 215657175 . A . PASS END=215657177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:51:36:0,51,765:0,92,255:17,0 chr2 215657182 . TAA TA,T,TAAA,AAA, 1.49 DRAGENIndelHardQUAL DP=31;MQ=247.45;MQRankSum=4.635;ReadPosRankSum=1.767;FractionInformativeReads=0.968;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:16,6,3,4,1,0:0.200,0.100,0.133,0.033,0.000:30:7,0,0,2,1,0:9,6,3,2,0,0:5:3,0,47,33,131,80,34,63,125,81,72,145,281,217,119,381,381,381,381,381,381:255,0,255:15,17:1.4894e+00,5.3751e+00,5.5375e+01,3.8377e+01,1.4331e+02,8.8377e+01,3.9250e+01,7.5459e+01,1.3767e+02,8.9250e+01,1.0513e+02,1.8529e+02,3.2146e+02,2.5743e+02,1.5513e+02,4.1446e+02,4.2146e+02,4.2146e+02,4.2146e+02,4.4853e+02,4.1747e+02:0.00,7.00,10.01,7.00,14.00,10.01,7.00,14.00,14.00,10.01,34.77,41.77,41.77,41.77,37.78,34.77,41.77,41.77,41.77,69.54,37.78:7,9,3,11:8,8,10,4 chr2 215657183 . A . LowGQ END=215657183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,18:38:0:38:0,0,77:255,0,255:21,13 chr2 215657851 . C . PASS END=215657949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,111,1665:0,146,255:40,0 chr2 215661772 . C . PASS END=215661772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:77:0,120,1800:0,232,255:40,0 chr2 215661776 . A . PASS END=215661776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,3:78:99:78:0,120,1800:0,185,255:40,0 chr2 215661780 . C . PASS END=215661781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 215661783 . A . PASS END=215661783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:79:0,120,1800:0,237,255:40,0 chr2 215661785 . C . PASS END=215661842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:81:0,120,1800:0,223,255:40,0 chr2 215661844 . G . PASS END=215661846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,197,255:40,0 chr2 215661848 . G . PASS END=215661848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 215674130 . C . PASS END=215674131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 215674133 . T . PASS END=215674133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 215674135 . C . PASS END=215674135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 215674136 . C . PASS END=215674136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 215674137 . A . PASS END=215674168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,748:0,62,255:26,0 chr2 215674169 . T . PASS END=215674169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:24,0 chr2 215674170 . C . PASS END=215674175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 215674176 . C . PASS END=215674178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 215674179 . C . PASS END=215674182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 215674183 . A . PASS END=215674184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 215674185 . T . PASS END=215674185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 215674186 . G . PASS END=215674186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 215674187 . T . PASS END=215674188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:26,0 chr2 215674189 . G . PASS END=215674223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:32:0,83,1151:0,83,255:33,0 chr2 215674224 . G A, 50.00 PASS DP=34;MQ=248.42;MQRankSum=4.863;ReadPosRankSum=3.019;FractionInformativeReads=0.971;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,18,0:0.545,0.000:33:7,11,0:8,7,0:48:85,0,49,610,528,1139:255,0,255:14,0:5.0000e+01,6.8081e-05,5.2481e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,5,14,4:8,7,13,5 chr2 215674225 . C . PASS END=215674252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1186:0,83,255:35,0 chr2 215674253 . A . PASS END=215674253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1292:0,78,255:32,0 chr2 215674254 . T . PASS END=215674261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1395:0,99,255:34,0 chr2 215674262 . T . PASS END=215674285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1211:0,86,255:35,0 chr2 215674286 . T . PASS END=215674295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1282:0,84,255:35,0 chr2 215674297 . C . PASS END=215674297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,111,1665:0,120,255:37,0 chr2 215674299 . C . PASS END=215674299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 215674303 . T . PASS END=215674303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,109,1406:0,109,255:38,0 chr2 215674305 . C . PASS END=215674305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 215674407 . T . PASS END=215674407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 215796450 . C . PASS END=215796450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 215796514 . G . PASS END=215796514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 215796548 . T . PASS END=215796548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 215796626 . C . PASS END=215796626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 215796634 . C . PASS END=215796634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 215796638 . C . PASS END=215796638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 215796645 . A . PASS END=215796645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,931:0,57,255:27,0 chr2 215796694 . G . PASS END=215796694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr2 215796784 . G . LowGQ END=215796784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,612:17,0,255:15,0 chr2 215796806 . C . PASS END=215796806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 215796833 . A . PASS END=215796833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 215796893 . C . PASS END=215796893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 215796962 . G . PASS END=215796962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 215796980 . C . PASS END=215796980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 215796993 . C . PASS END=215796993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 215797014 . A . PASS END=215797014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1251:0,100,255:36,0 chr2 215797083 . G . PASS END=215797083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,117,1755:0,129,255:39,0 chr2 215797358 . T . PASS END=215797369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1090:0,86,255:33,0 chr2 215797370 . C . PASS END=215797465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:36:0,108,1307:0,108,255:40,0 chr2 215798802 . C . PASS END=215798939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:93:39:0,93,1395:0,101,255:40,0 chr2 215802234 . T . PASS END=215802339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,102,1522:0,108,255:40,0 chr2 215807634 . G . PASS END=215807634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 215807649 . C . PASS END=215807741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:46:0,114,1710:0,122,255:40,0 chr2 215809725 . C . PASS END=215809828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:38:0,90,1281:0,90,255:40,0 chr2 215809842 . T . PASS END=215809842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 215812146 . C . PASS END=215812259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,120,1800:0,131,255:40,0 chr2 215812260 . C . PASS END=215812280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,108,1620:0,128,255:40,0 chr2 215813320 . T . PASS END=215813461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:32:0,85,1143:0,85,255:40,0 chr2 215813759 . C . PASS END=215813759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 215813764 . C . PASS END=215813873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:44:0,114,1561:0,115,255:40,0 chr2 215815603 . C . PASS END=215815794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:32:0,86,1143:0,86,255:40,0 chr2 215815795 . T . PASS END=215815795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,996:0,79,255:31,0 chr2 215815796 . C . PASS END=215815796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1172:0,96,255:32,0 chr2 215815797 . T . PASS END=215815797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1094:0,65,255:31,0 chr2 215815798 . G . PASS END=215815800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1172:0,80,255:32,0 chr2 215815801 . G . PASS END=215815807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,79,255:25,0 chr2 215818578 . C . PASS END=215818831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:36:0,92,1272:0,92,255:40,0 chr2 215819926 . C . PASS END=215819975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:46:0,120,1800:0,138,255:40,0 chr2 215819976 . C . PASS END=215820012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:64:0,120,1800:0,150,255:40,0 chr2 215820013 . G A, 48.21 PASS DP=76;MQ=249.99;MQRankSum=7.365;ReadPosRankSum=2.673;FractionInformativeReads=0.987;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:43,32,0:0.427,0.000:75:21,16,0:22,16,0:47:83,0,50,1135,1491,2626:255,0,255:37,0:4.8207e+01,8.7237e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:19,24,11,21:23,20,13,19 chr2 215820014 . T . PASS END=215820050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:64:0,120,1800:0,179,255:40,0 chr2 215820051 . C . PASS END=215820086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,120,1800:0,137,255:40,0 chr2 215821387 . C . PASS END=215821502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:85,1:86:99:58:0,120,1800:0,124,255:40,0 chr2 215823001 . C . PASS END=215823146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:85:33:0,85,1102:0,85,255:40,0 chr2 215823147 . G . PASS END=215823147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1651:0,72,255:40,0 chr2 215823148 . T . PASS END=215823173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:40:0,99,1485:0,102,255:40,0 chr2 215823174 . T . PASS END=215823178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:75:39:0,75,1125:0,117,255:26,0 chr2 215823744 . T . PASS END=215823744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:76:0,120,1800:0,228,255:40,0 chr2 215823748 . G . PASS END=215823802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:52:0,120,1800:0,143,255:40,0 chr2 215831572 . C . PASS END=215831677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:55:0,114,1710:0,140,255:40,0 chr2 215833444 . C . PASS END=215833452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:68:0,120,1800:0,138,255:40,0 chr2 215833453 . T . PASS END=215833531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:71:0,120,1800:0,173,255:40,0 chr2 215833534 . A . PASS END=215833534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 215834984 . C . PASS END=215834984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:66:0,120,1800:0,198,255:40,0 chr2 215834993 . T . PASS END=215834993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,204,255:40,0 chr2 215834997 . C . PASS END=215835124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,2:83:99:62:0,120,1800:0,171,255:40,0 chr2 215835130 . A . PASS END=215835130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,1:69:99:69:0,120,1800:0,191,255:40,0 chr2 215838673 . C . PASS END=215838766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:45:0,120,1800:0,135,255:40,0 chr2 215839502 . A . PASS END=215839532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,129,255:40,0 chr2 215839533 . T . PASS END=215839569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,110,1800:0,110,255:40,0 chr2 215839570 . C T, 38.72 PASS DP=51;MQ=250.00;MQRankSum=5.646;ReadPosRankSum=-0.655;FractionInformativeReads=0.980;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,16,0:0.320,0.000:50:18,9,0:16,7,0:39:73,0,50,571,1208,1779:255,0,255:28,0:3.8717e+01,6.0526e-04,5.3001e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,21,9,7:15,19,6,10 chr2 215839571 . G . PASS END=215839585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:43:0,111,1665:0,118,255:40,0 chr2 215839586 . T . PASS END=215839586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1385:0,71,255:33,0 chr2 215839587 . T . PASS END=215839588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,108,1620:0,117,255:36,0 chr2 215840494 . C . PASS END=215840494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 215840508 . C . PASS END=215840508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 215840509 . G . PASS END=215840513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr2 215840514 . G . PASS END=215840515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 215840516 . A . PASS END=215840516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,881:0,45,255:26,0 chr2 215840517 . G . PASS END=215840529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,995:0,84,255:28,0 chr2 215840530 . G . PASS END=215840530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 215840531 . A . PASS END=215840534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,967:0,48,255:26,0 chr2 215840535 . A . PASS END=215840731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:32:0,81,1141:0,96,255:40,0 chr2 215840732 . C . PASS END=215840750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,75,255:26,0 chr2 215840751 . C . PASS END=215840751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 215840752 . A . PASS END=215840761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 215840776 . G . PASS END=215840776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 215843038 . A . PASS END=215843038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr2 215843040 . C . PASS END=215843175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:36:0,84,1260:0,97,255:40,0 chr2 215843176 . C . PASS END=215843190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:29:0,63,945:0,87,255:26,0 chr2 215843528 . C . PASS END=215843532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 215843533 . C . PASS END=215843542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:29,0 chr2 215843543 . A . PASS END=215843543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 215843544 . T . PASS END=215843764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:30:0,80,1117:0,80,255:40,0 chr2 215845207 . C . PASS END=215845207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 215845208 . T . PASS END=215845220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,803:0,69,255:26,0 chr2 215845221 . G . PASS END=215845225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 215845226 . A . PASS END=215845226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:29,0 chr2 215845227 . G . PASS END=215845265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:31:0,86,1164:0,86,255:36,0 chr2 215845266 . G . PASS END=215845266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:37,0 chr2 215845267 . G . PASS END=215845365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1141:0,82,255:40,0 chr2 215845366 . G . PASS END=215845367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:26,0 chr2 215846911 . C . PASS END=215847094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:36:0,84,1258:0,91,255:40,0 chr2 215847095 . A . PASS END=215847107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 215848371 . C . PASS END=215848589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:85:32:0,85,1113:0,85,255:40,0 chr2 215851266 . A . PASS END=215851283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:32:0,93,1395:0,96,255:40,0 chr2 215851284 . G . PASS END=215851452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:84:34:0,84,1260:0,102,255:40,0 chr2 215852359 . G . PASS END=215852359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 215852362 . T . PASS END=215852505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:38:0,81,1215:0,85,255:40,0 chr2 215852506 . T . PASS END=215852517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:24,0 chr2 215854041 . G . PASS END=215854042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1299:0,92,255:36,0 chr2 215854053 . C . PASS END=215854187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:45:0,117,1667:0,117,255:40,0 chr2 215854276 . C . PASS END=215854345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:91:40:0,91,1543:0,91,255:40,0 chr2 215855426 . C . PASS END=215855742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:42:0,108,1620:0,124,255:40,0 chr2 215855743 . T . PASS END=215855745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:42:0,90,1350:0,126,255:32,0 chr2 215855746 . T . PASS END=215855755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:31:0,69,1080:0,69,255:26,0 chr2 215862405 . G . PASS END=215862405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 215862419 . C . PASS END=215862420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:51:0,120,1800:0,137,255:40,0 chr2 215862421 . C . PASS END=215862533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:53:0,120,1800:0,130,255:40,0 chr2 215865429 . T . PASS END=215865744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:89:32:0,89,1172:0,89,255:40,0 chr2 215866282 . T . PASS END=215866459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:81:34:0,81,1215:0,84,255:40,2 chr2 215866460 . A . PASS END=215866460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 215866461 . T . PASS END=215866461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 215868933 . C . PASS END=215869024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:57:0,120,1800:0,155,255:40,0 chr2 215872451 . C . PASS END=215872570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:66:0,120,1800:0,189,255:40,0 chr2 215875055 . C . PASS END=215875189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:27:0,81,1031:0,81,255:40,0 chr2 215875190 . T . PASS END=215875192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 215875193 . T . PASS END=215875194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 215875208 . G . PASS END=215875208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 215876163 . T . PASS END=215876165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1575:0,111,255:35,0 chr2 215876166 . A T, 157.90 PASS DP=37;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,37,0:1.000,0.000:37:0,23,0:0,14,0:108:196,111,0,1405,111,1405:255,111,0:0,0:1.5790e+02,1.0790e+02,0.0000e+00,4.5000e+02,1.4267e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,26,11:0,0,20,17 chr2 215876167 . A . PASS END=215876203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:40:0,90,1426:0,90,255:40,0 chr2 215876204 . T . PASS END=215876333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,102,1656:0,102,255:40,0 chr2 215876334 . A . PASS END=215876353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:42:0,96,1543:0,96,255:40,0 chr2 215876354 . C . PASS END=215876354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:36,0 chr2 215876355 . G . PASS END=215876370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:34:0,87,1305:0,102,255:37,0 chr2 215876371 . T C, 50.00 PASS DP=33;MQ=249.85;MQRankSum=4.321;ReadPosRankSum=4.429;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,18,0:0.545,0.000:33:7,10,0:8,8,0:48:85,0,49,644,528,1172:255,0,255:13,0:5.0000e+01,6.8339e-05,5.2407e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,11,8,10:10,5,10,8 chr2 215876372 . G . PASS END=215876373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 215876693 . A . PASS END=215876693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:31,0 chr2 215876695 . C . PASS END=215876703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:32:0,96,1170:0,96,255:36,0 chr2 215876704 . T . PASS END=215876704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:35,0 chr2 215876705 . G . PASS END=215876859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:36:0,102,1365:0,108,255:40,0 chr2 215880214 . C . PASS END=215880229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,831:0,61,255:26,0 chr2 215880230 . T . PASS END=215880239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,994:0,81,255:32,0 chr2 215880240 . A . PASS END=215880240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:31,0 chr2 215880241 . G . PASS END=215880380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:30:0,81,1186:0,83,255:40,0 chr2 215880381 . A . PASS END=215880381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr2 215880382 . A . PASS END=215880383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 215880384 . T . PASS END=215880385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 215880386 . A . PASS END=215880386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 215880387 . T . PASS END=215880387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 215880402 . A . PASS END=215880402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 215882732 . C . PASS END=215882853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:81:35:0,81,1211:0,88,255:40,0 chr2 215882854 . G . PASS END=215882856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 215884059 . C . PASS END=215884172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:81:40:0,81,1421:0,81,255:40,0 chr2 215884264 . T . PASS END=215884342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:34:0,88,1201:0,88,255:40,0 chr2 215884343 . A . PASS END=215884379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:46:0,120,1800:0,137,255:40,0 chr2 215884380 . C T, 50.00 PASS DP=45;MQ=249.00;MQRankSum=5.618;ReadPosRankSum=2.491;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,27,0:0.600,0.000:45:9,13,0:9,14,0:47:85,0,47,961,636,1597:255,0,255:16,0:5.0000e+01,9.2155e-05,4.9502e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,7,13,14:8,10,15,12 chr2 215884381 . G . PASS END=215884417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,125,255:40,0 chr2 215884418 . A . PASS END=215884520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:32:0,83,1159:0,83,255:40,0 chr2 215890388 . A . PASS END=215890388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 215890397 . T . PASS END=215890400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,102,1530:0,105,255:35,0 chr2 215890401 . G . PASS END=215890503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:87:37:0,87,1364:0,87,255:40,0 chr2 215891544 . C . PASS END=215891662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:86:34:0,86,1210:0,86,255:40,0 chr2 215896545 . T . PASS END=215896651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,99,1474:0,99,255:40,0 chr2 215901677 . C . PASS END=215901789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:44:0,120,1800:0,132,255:40,0 chr2 215910561 . C . PASS END=215910739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:81:35:0,81,1215:0,105,255:40,0 chr2 215914342 . A . PASS END=215914342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1388:0,111,255:37,0 chr2 215914349 . C . PASS END=215914535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:41:0,118,1500:0,118,255:40,0 chr2 215917211 . C . PASS END=215917308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:88,0:88:99:74:0,120,1800:0,196,255:40,0 chr2 215919297 . C . PASS END=215919388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:49:0,114,1710:0,147,255:40,0 chr2 215928789 . C . PASS END=215928919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:37:0,81,1215:0,98,255:40,0 chr2 215928920 . A . PASS END=215928921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:31:0,78,1170:0,93,255:26,0 chr2 215928922 . G . PASS END=215928925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 215928926 . T . PASS END=215928942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr2 215940231 . T . PASS END=215940237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,89,255:29,0 chr2 215940238 . G . PASS END=215940240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 215940241 . A . PASS END=215940241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:96:43:0,96,1440:0,113,255:31,0 chr2 215940242 . T C, 181.98 PASS DP=45;MQ=249.33;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,45,0:1.000,0.000:45:0,17,0:0,28,0:132:220,135,0,1691,135,1691:255,141,0:0,0:1.8198e+02,1.3198e+02,0.0000e+00,4.5000e+02,1.6675e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,13:0,0,24,21 chr2 215940243 . C . PASS END=215940282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:47:0,105,1575:0,118,255:40,0 chr2 215940283 . G . LowGQ END=215940285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,14:58:0:58:0,0,1002:132,0,255:40,23 chr2 215940286 . A . PASS END=215940329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,105,1800:0,105,255:40,0 chr2 215940330 . A . PASS END=215940340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:95:44:0,95,1568:0,95,255:40,0 chr2 215976320 . A . PASS END=215976413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:54:0,120,1800:0,146,255:40,0 chr2 216002863 . C . PASS END=216002931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:67:0,120,1800:0,171,255:40,0 chr2 216002939 . A . PASS END=216002939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 216003149 . T . PASS END=216003149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 216176866 . A . PASS END=216176899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,621:0,51,255:19,0 chr2 216176900 . A . PASS END=216176900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:17,0 chr2 216176901 . G . PASS END=216176928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,48,255:17,0 chr2 216176929 . C . PASS END=216176941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 216176942 . C . PASS END=216176946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,458:0,42,255:14,0 chr2 216176947 . T . PASS END=216176952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 216176953 . C . PASS END=216176953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 216176954 . G . PASS END=216176958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 216176959 . G . PASS END=216176959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 216176960 . C . PASS END=216176961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 216176962 . G . PASS END=216176963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 216176964 . A . PASS END=216176966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 216176967 . C . PASS END=216176968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 216176969 . G . PASS END=216176969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 216176970 . C . PASS END=216176971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 216176972 . C . PASS END=216176983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 216176984 . C . PASS END=216176984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 216176985 . G . PASS END=216176997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,613:0,51,255:17,0 chr2 216177205 . A . PASS END=216177341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:93:37:0,93,1395:0,98,255:40,0 chr2 216177342 . A . PASS END=216177342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:30,0 chr2 216177343 . G . PASS END=216177347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr2 216182880 . A . PASS END=216182956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:45:0,105,1575:0,135,255:40,0 chr2 216184388 . G . PASS END=216184454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:93,0:93:99:70:0,120,1800:0,197,255:40,0 chr2 216185825 . C T, 41.88 PASS DP=33;MQ=249.79;MQRankSum=3.762;ReadPosRankSum=3.418;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:22,11,0:0.333,0.000:33:7,4,0:15,7,0:42:77,0,50,393,773,1167:255,0,255:18,0:4.1884e+01,3.0314e-04,5.3000e+01,3.9337e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,14,5,6:15,7,6,5 chr2 216189964 . A . PASS END=216190052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:36:0,87,1305:0,92,255:40,0 chr2 216190710 . G . PASS END=216190717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,847:0,69,255:26,0 chr2 216190718 . A . PASS END=216190722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 216190723 . A . PASS END=216190723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 216190724 . C . PASS END=216190724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1008:0,57,255:28,0 chr2 216190725 . T . PASS END=216190725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 216190726 . G . PASS END=216190726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1163:0,90,255:30,0 chr2 216190727 . A . PASS END=216190727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 216190728 . G . PASS END=216190728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1147:0,90,255:30,0 chr2 216190729 . A . LowGQ END=216190729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,5:30:0:30:0,0,626:8,0,255:24,0 chr2 216190730 . G . PASS END=216190730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 216190731 . C . PASS END=216190732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 216190733 . G . PASS END=216190733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 216190734 . C . PASS END=216190735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 216190736 . G . PASS END=216190736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 216190737 . C . PASS END=216190743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:30:0,60,1039:0,60,255:30,0 chr2 216190744 . C . PASS END=216190744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 216190745 . C . PASS END=216190746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1047:0,60,255:30,0 chr2 216190747 . C . PASS END=216190752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 216190753 . A . PASS END=216190754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:28,0 chr2 216190755 . T . PASS END=216190756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 216190757 . A . PASS END=216190757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:28,0 chr2 216190758 . C . PASS END=216190775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1135:0,80,255:33,0 chr2 216190776 . A . PASS END=216190776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:27,0 chr2 216190777 . G . PASS END=216190778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 216190779 . A . PASS END=216190779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 216190780 . C . PASS END=216190796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1173:0,80,255:34,0 chr2 216190797 . C . PASS END=216190797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1200:0,50,255:28,0 chr2 216190798 . G . PASS END=216190806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 216190807 . G . PASS END=216190807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 216190808 . A . PASS END=216190814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 216190815 . A . PASS END=216190817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 216190818 . G . PASS END=216190820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 216190821 . A . PASS END=216190821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 216190822 . G . PASS END=216190829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 216190830 . C . PASS END=216190834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 216190835 . G . PASS END=216190835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:46:28:0,46,1008:0,46,255:25,0 chr2 216190836 . A . PASS END=216190849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,921:0,62,255:26,0 chr2 216190850 . T . PASS END=216190850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,790:0,42,255:21,0 chr2 216190851 . T . PASS END=216190854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 216190855 . C . PASS END=216190861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,715:0,49,255:19,0 chr2 216191545 . G . PASS END=216191552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:31:0,80,1155:0,80,255:39,0 chr2 216191553 . T . PASS END=216191701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:93:38:0,93,1388:0,93,255:40,0 chr2 216197105 . T . PASS END=216197108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,970:0,81,255:27,0 chr2 216197109 . A . PASS END=216197124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,962:0,78,255:26,0 chr2 216197125 . T . PASS END=216197129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 216197130 . A . PASS END=216197130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 216197131 . A . PASS END=216197151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,934:0,81,255:30,0 chr2 216197152 . G . PASS END=216197152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:13:30:0,13,939:0,13,255:28,0 chr2 216197153 . C . PASS END=216197178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,87,255:30,0 chr2 216197179 . G . PASS END=216197179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 216197180 . A . PASS END=216197182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 216197183 . C . PASS END=216197199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 216197200 . G . PASS END=216197217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:17:0,42,630:0,51,255:18,0 chr2 216197218 . G . PASS END=216197218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 216197219 . T . PASS END=216197228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 216197229 . A . PASS END=216197230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 216198073 . G . PASS END=216198086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:26,0 chr2 216198087 . A . PASS END=216198129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1008:0,81,255:34,0 chr2 216198130 . A . PASS END=216198130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1217:0,75,255:31,0 chr2 216198131 . T . PASS END=216198177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1178:0,89,255:36,0 chr2 216198178 . G . PASS END=216198178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 216198179 . A . PASS END=216198180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 216199642 . G . PASS END=216199727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:64:0,120,1800:0,192,255:40,0 chr2 216200745 . A . PASS END=216200847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:98:48:0,98,1668:0,98,255:40,0 chr2 216203502 . A . PASS END=216203630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:90:33:0,90,1166:0,90,255:40,0 chr2 216205167 . G . PASS END=216205167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 216209502 . T . PASS END=216209580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:39:0,84,1415:0,84,255:40,0 chr2 216209581 . C . PASS END=216209581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:35,0 chr2 216209582 . C . PASS END=216209594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1235:0,91,255:36,0 chr2 216211482 . G . PASS END=216211488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,922:0,62,255:25,0 chr2 216211489 . G . PASS END=216211489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:24,0 chr2 216211490 . C . PASS END=216211499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:26,0 chr2 216211500 . G . PASS END=216211664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:27:0,80,1024:0,80,255:40,0 chr2 216212339 . T . PASS END=216212339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 216213817 . G . PASS END=216213817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 216213818 . A . PASS END=216213818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 216213819 . T . PASS END=216213825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1052:0,93,255:32,0 chr2 216213826 . T . PASS END=216213826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 216213827 . T . PASS END=216213960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:32:0,82,1142:0,82,255:40,0 chr2 216213961 . A . PASS END=216213961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1261:0,75,255:29,0 chr2 216213962 . G . PASS END=216213974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1180:0,83,255:31,0 chr2 216213975 . A . PASS END=216213983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,73,255:22,0 chr2 216213984 . A . PASS END=216213987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:22:0,51,765:0,66,255:17,0 chr2 216214259 . A . PASS END=216214262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,992:0,68,255:26,0 chr2 216214263 . G . PASS END=216214275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:30:0,80,1169:0,80,255:35,0 chr2 216214276 . T . PASS END=216214276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:34,2 chr2 216214277 . G . PASS END=216214278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:45:38:0,45,1274:0,45,255:34,2 chr2 216214279 . G . PASS END=216214279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1349:0,73,255:35,0 chr2 216214280 . G . PASS END=216214303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:92:36:0,92,1324:0,92,255:40,0 chr2 216214304 . A . PASS END=216214304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1390:0,71,255:37,0 chr2 216214305 . A . PASS END=216214319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:42:0,87,1468:0,87,255:39,2 chr2 216214320 . C . PASS END=216214320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1441:0,57,255:37,2 chr2 216214321 . C . PASS END=216214378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:82:33:0,82,1130:0,82,255:40,0 chr2 216224011 . A . PASS END=216224025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:58:0,120,1800:0,157,255:40,0 chr2 216226278 . T . PASS END=216226349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:52:0,120,1800:0,140,255:40,0 chr2 216226602 . T . PASS END=216226607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:42:0,112,1378:0,112,255:40,0 chr2 216226608 . C . PASS END=216226608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1192:0,79,255:40,0 chr2 216226609 . A . PASS END=216226610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,3:45:85:45:0,85,1338:0,85,255:40,0 chr2 216226611 . T . PASS END=216226611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:46:45:0,46,1259:0,46,255:40,0 chr2 216226612 . T . PASS END=216226616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:45:0,120,1800:0,121,255:40,0 chr2 216226617 . C . PASS END=216226617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,4:47:74:47:0,74,1346:0,74,255:40,0 chr2 216226618 . A . PASS END=216226627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:80:49:0,80,1402:0,80,255:40,0 chr2 216226628 . A . PASS END=216226736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1215:0,80,255:40,0 chr2 216226737 . C . PASS END=216226750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:24:0,70,930:0,70,255:26,0 chr2 216226751 . C . PASS END=216226757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216226758 . A . PASS END=216226797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,876:0,64,255:26,0 chr2 216226798 . C . PASS END=216226802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 216229602 . C . PASS END=216229694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:33:0,81,1215:0,98,255:40,0 chr2 216229695 . A . PASS END=216229697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 216229698 . C . PASS END=216229698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 216229699 . G . PASS END=216229708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:27:0,72,1039:0,74,255:26,0 chr2 216230228 . G . PASS END=216230271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:51:0,120,1800:0,137,255:40,0 chr2 216230272 . C . PASS END=216230272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,8:70:77:70:0,77,2009:0,77,255:40,0 chr2 216230273 . A . PASS END=216230274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:70:0,120,1800:0,177,255:40,0 chr2 216230275 . C . PASS END=216230275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,10:71:2:71:0,2,1870:0,2,255:40,0 chr2 216230276 . T . PASS END=216230353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:47:0,99,1485:0,116,255:40,0 chr2 216232586 . T . PASS END=216232586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1205:0,102,255:34,0 chr2 216232587 . A . PASS END=216232750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:37:0,84,1260:0,97,255:40,0 chr2 216235017 . C . PASS END=216235018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 216235019 . G . PASS END=216235045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1000:0,81,255:32,0 chr2 216235046 . C . PASS END=216235047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:32,0 chr2 216235048 . A . PASS END=216235048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr2 216235049 . A . PASS END=216235049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1162:0,61,255:32,0 chr2 216235050 . C . PASS END=216235051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1257:0,99,255:33,0 chr2 216235052 . T . PASS END=216235059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:33:0,99,1257:0,99,255:34,0 chr2 216235060 . C . PASS END=216235060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:33,0 chr2 216235061 . T . PASS END=216235069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1288:0,105,255:35,0 chr2 216235070 . T . PASS END=216235070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 216235071 . T . PASS END=216235088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1288:0,102,255:35,0 chr2 216235089 . C T, 152.34 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,18,0:0,17,0:102:190,105,0,1349,105,1349:255,105,0:0,0:1.5234e+02,1.0234e+02,0.0000e+00,4.5000e+02,1.3711e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,20:0,0,22,13 chr2 216235090 . G . PASS END=216235112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:33,0 chr2 216235113 . G . PASS END=216235126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:25,0 chr2 216235127 . G . PASS END=216235144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr2 216235145 . G . PASS END=216235155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:19,0 chr2 216236632 . C . PASS END=216236632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 216236633 . T . PASS END=216236633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr2 216236634 . G . PASS END=216236636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr2 216236637 . A . PASS END=216236637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 216236638 . G . PASS END=216236641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 216236642 . T . PASS END=216236642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr2 216236643 . C . PASS END=216236643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 216236644 . T . PASS END=216236657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:43:20:0,43,615:0,43,255:19,0 chr2 216236658 . C . PASS END=216236658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 216236659 . A . PASS END=216236659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,653:0,29,255:18,0 chr2 216236660 . G . PASS END=216236660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr2 216236661 . G . PASS END=216236662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 216236663 . T . PASS END=216236663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:18,0 chr2 216236664 . G . PASS END=216236674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 216236675 . A . PASS END=216236675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 216236676 . T . PASS END=216236677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,754:0,63,255:22,0 chr2 216236678 . T . PASS END=216236678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:21,0 chr2 216236679 . A . PASS END=216236682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 216236683 . A . PASS END=216236683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 216236684 . G . PASS END=216236686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216236687 . G . PASS END=216236688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 216236689 . G . PASS END=216236692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 216236693 . T . PASS END=216236693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 216236694 . G . PASS END=216236694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:26,0 chr2 216236695 . G . PASS END=216236702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,984:0,68,255:26,0 chr2 216236703 . C . PASS END=216236703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,889:0,34,255:23,0 chr2 216236704 . C . PASS END=216236716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,941:0,65,255:26,0 chr2 216236717 . G . PASS END=216236717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 216236718 . T . PASS END=216236718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 216236719 . C . PASS END=216236728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:28,0 chr2 216236729 . G . PASS END=216236729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 216236730 . C . PASS END=216236730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:25,0 chr2 216236731 . T . PASS END=216236733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 216236734 . T . PASS END=216236734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1008:0,56,255:25,0 chr2 216236735 . T . PASS END=216236735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 216236736 . G . PASS END=216236742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 216236743 . A . PASS END=216236743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 216236744 . G . PASS END=216236744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 216236745 . A . PASS END=216236745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 216236746 . G . PASS END=216236749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 216236750 . T . PASS END=216236750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 216236751 . T . PASS END=216236768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1055:0,84,255:30,0 chr2 216236769 . C . PASS END=216236769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr2 216236770 . G . PASS END=216236770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 216236771 . T . PASS END=216236771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,962:0,35,255:22,0 chr2 216236772 . G . PASS END=216236787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:25:0,69,969:0,75,255:25,0 chr2 216236788 . G . PASS END=216236859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1094:0,87,255:35,0 chr2 216236860 . A . PASS END=216236861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 216236862 . G . PASS END=216236879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1215:0,93,255:31,0 chr2 216236880 . T . PASS END=216236886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 216236887 . C . PASS END=216236902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1124:0,84,255:30,0 chr2 216236903 . A . PASS END=216236903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 216236904 . A . PASS END=216236928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1090:0,80,255:32,0 chr2 216236929 . T . PASS END=216236929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 216236930 . T . PASS END=216236930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1041:0,41,255:24,0 chr2 216236931 . G . PASS END=216236939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:35:0,81,1305:0,81,255:35,0 chr2 216236940 . T . PASS END=216236940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1266:0,69,255:34,0 chr2 216236941 . G . PASS END=216236943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1316:0,92,255:34,0 chr2 216236944 . T . PASS END=216236945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:33,0 chr2 216236946 . G . PASS END=216236947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:35,0 chr2 216236948 . T . PASS END=216236950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 216236951 . C . PASS END=216236961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,105,1304:0,105,255:38,0 chr2 216236962 . A . PASS END=216236962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:37,0 chr2 216236963 . G . PASS END=216236979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1294:0,92,255:38,0 chr2 216236980 . T . PASS END=216236980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr2 216236981 . C . PASS END=216236990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1186:0,86,255:34,0 chr2 216236991 . A . PASS END=216236991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:31,0 chr2 216236992 . C . PASS END=216236994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:32,0 chr2 216236995 . A . PASS END=216236995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:31,0 chr2 216236996 . G . PASS END=216237017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1064:0,87,255:32,0 chr2 216237018 . T . PASS END=216237018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,882:0,51,255:29,0 chr2 216237019 . T . PASS END=216237022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1147:0,90,255:30,0 chr2 216237023 . A . PASS END=216237023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 216237024 . C . PASS END=216237026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 216237027 . T . PASS END=216237027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:27,0 chr2 216237028 . G . PASS END=216237034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 216237035 . A . PASS END=216237036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 216237037 . A . PASS END=216237038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr2 216237039 . C . PASS END=216237040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 216237041 . A . PASS END=216237041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,935:0,48,255:24,0 chr2 216237042 . A . PASS END=216237046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:27:0,70,992:0,70,255:25,0 chr2 216237047 . T . PASS END=216237051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216237052 . T . PASS END=216237052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 216237053 . C . PASS END=216237055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216237056 . T . PASS END=216237058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,978:0,67,255:25,0 chr2 216237059 . A . PASS END=216237059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:24,0 chr2 216237060 . G . PASS END=216237060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 216237061 . A . PASS END=216237061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr2 216237062 . T . PASS END=216237062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 216237063 . T . PASS END=216237063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr2 216237064 . G . PASS END=216237069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,75,255:20,0 chr2 216237070 . T . PASS END=216237095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr2 216237096 . C . PASS END=216237098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 216238045 . C . PASS END=216238134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,120,1800:0,121,255:40,0 chr2 216239937 . C . PASS END=216239941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:18,0 chr2 216239942 . A . PASS END=216239943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 216239944 . A . PASS END=216239944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:20,0 chr2 216239945 . G . PASS END=216239957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:26,0 chr2 216239958 . C . PASS END=216239959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 216239960 . C . PASS END=216239960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 216239961 . C . PASS END=216240080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:31:0,89,1164:0,89,255:40,0 chr2 216240081 . T . PASS END=216240086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:27,0 chr2 216240087 . G . PASS END=216240093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:35:0,60,900:0,105,255:24,0 chr2 216240094 . C . PASS END=216240100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:42:35:0,42,630:0,105,255:19,0 chr2 216240101 . G . PASS END=216240102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:33:36:0,33,495:0,108,255:13,0 chr2 216240103 . T . PASS END=216240108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:12:32:0,12,180:0,96,255:5,0 chr2 216240109 . A . PASS END=216240116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:3:26:0,3,45:0,78,255:3,0 chr2 216240352 . C . PASS END=216240441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:86:33:0,86,1218:0,86,255:40,0 chr2 216241221 . C . PASS END=216241396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:87:35:0,87,1255:0,89,255:40,0 chr2 216241397 . T . PASS END=216241397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1187:0,69,255:28,0 chr2 216242898 . T . PASS END=216242898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,893:0,75,255:25,0 chr2 216242899 . C . PASS END=216242899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 216242900 . T . PASS END=216242900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 216242901 . C . PASS END=216242916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1271:0,87,255:38,0 chr2 216242917 . T A, 50.00 PASS DP=44;MQ=250.00;MQRankSum=5.663;ReadPosRankSum=-0.493;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,23,0:0.523,0.000:44:11,10,0:10,13,0:48:85,0,50,785,736,1528:255,0,255:21,0:5.0000e+01,6.6010e-05,5.2854e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,9,15,8:12,9,14,9 chr2 216242918 . C . PASS END=216242985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:44:0,113,1579:0,113,255:40,0 chr2 216243853 . C . PASS END=216243854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1382:0,111,255:37,0 chr2 216243855 . T . PASS END=216243855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1286:0,78,255:35,0 chr2 216243856 . A . PASS END=216243869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:97:38:0,97,1313:0,97,255:40,0 chr2 216243870 . C . PASS END=216244026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:84:30:0,84,1188:0,84,255:40,0 chr2 216244027 . T . PASS END=216244040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:27:0,73,1033:0,73,255:26,0 chr2 216245534 . C . PASS END=216245536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 216245537 . T . PASS END=216245537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 216245538 . G . PASS END=216245552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,892:0,69,255:25,0 chr2 216245553 . C . PASS END=216245553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 216245554 . A . PASS END=216245561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 216245562 . G . PASS END=216245638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1001:0,81,255:35,0 chr2 216245639 . T . PASS END=216245639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1235:0,56,255:34,0 chr2 216245640 . G . PASS END=216245747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,102,1342:0,104,255:40,0 chr2 216245748 . T . PASS END=216245748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:36,0 chr2 216245749 . T . PASS END=216245781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:33:0,83,1186:0,83,255:37,0 chr2 216245782 . A . PASS END=216245797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:22:0,60,900:0,66,255:22,0 chr2 216245798 . C . PASS END=216245798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 216245799 . A . PASS END=216245803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 216246935 . T . PASS END=216247037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:85:33:0,85,1164:0,85,255:40,0 chr2 216247038 . T . PASS END=216247038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:29,0 chr2 216247039 . T . PASS END=216247048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:30,0 chr2 216248051 . C . PASS END=216248060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr2 216248061 . A . PASS END=216248061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1002:0,56,255:27,0 chr2 216248062 . G . PASS END=216248062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 216248063 . T . PASS END=216248063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:28,0 chr2 216248064 . T . PASS END=216248064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 216248065 . T . PASS END=216248065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 216248066 . T . PASS END=216248067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:29,0 chr2 216248068 . G . PASS END=216248068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 216248069 . T . PASS END=216248070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1025:0,87,255:29,0 chr2 216248071 . T . PASS END=216248071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 216248072 . T . PASS END=216248074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 216248075 . T . PASS END=216248075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:26,0 chr2 216248076 . T . PASS END=216248079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 216248080 . C . PASS END=216248081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 216248082 . T . PASS END=216248082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr2 216248083 . G . PASS END=216248084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 216248085 . T . PASS END=216248206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:85:31:0,85,1097:0,85,255:40,0 chr2 216248743 . C . PASS END=216248755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:32:0,88,1187:0,88,255:34,0 chr2 216248756 . A . PASS END=216248907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:89:33:0,89,1260:0,89,255:40,0 chr2 216249583 . C . PASS END=216249583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 216249584 . T . PASS END=216249586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,909:0,75,255:25,0 chr2 216249587 . C T, 118.77 PASS DP=24;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,24,0:1.000,0.000:24:0,10,0:0,14,0:69:157,72,0,901,72,901:255,75,0:0,0:1.1877e+02,6.8774e+01,5.1772e-07,4.5000e+02,1.0354e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,9:0,0,9,15 chr2 216249588 . T . PASS END=216249588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,878:0,75,255:25,0 chr2 216249589 . C . PASS END=216249589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 216249590 . T . PASS END=216249595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,945:0,75,255:26,0 chr2 216249596 . A . PASS END=216249596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr2 216249597 . G . PASS END=216249601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:26,0 chr2 216249602 . C . PASS END=216249602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216249603 . C . PASS END=216249603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:27,0 chr2 216249604 . T . PASS END=216249606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 216249607 . A . PASS END=216249607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 216249608 . A . PASS END=216249624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1127:0,83,255:34,0 chr2 216249625 . C . PASS END=216249693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:82:34:0,82,1266:0,82,255:40,0 chr2 216249694 . C . PASS END=216249694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1163:0,44,255:28,0 chr2 216249695 . A . PASS END=216249699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1286:0,89,255:32,0 chr2 216251412 . C . PASS END=216251419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:22:0,63,907:0,64,255:26,0 chr2 216251420 . T . PASS END=216251444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,994:0,81,255:34,0 chr2 216251445 . C . PASS END=216251445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 216251446 . C . PASS END=216251533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:34:0,99,1272:0,102,255:40,0 chr2 216251534 . A . PASS END=216251534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1480:0,71,255:37,0 chr2 216251535 . C . PASS END=216251624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1342:0,98,255:39,0 chr2 216251625 . C . PASS END=216251641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:61:26:0,61,767:0,61,255:25,0 chr2 216251642 . G . PASS END=216251642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,867:0,45,255:21,0 chr2 216251643 . T . PASS END=216251645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 216251646 . T . PASS END=216251646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,792:0,31,255:22,0 chr2 216251647 . A . PASS END=216251647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,892:0,61,255:23,0 chr2 216251648 . T . PASS END=216251648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,930:0,47,255:23,0 chr2 216251649 . C . PASS END=216251650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,945:0,75,255:25,0 chr2 216251651 . G . PASS END=216251651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 216251652 . A . PASS END=216251659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1008:0,78,255:26,0 chr2 216251660 . A . PASS END=216251668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:24,0 chr2 216251669 . G . PASS END=216251669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 216251670 . G . PASS END=216251671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 216251672 . G . PASS END=216251681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:22:0,54,810:0,56,255:19,0 chr2 216252935 . C . PASS END=216253001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:38:0,104,1390:0,104,255:40,0 chr2 216253002 . A . PASS END=216253024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:88:35:0,88,1099:0,88,255:40,0 chr2 216256355 . T . PASS END=216256363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,768:0,63,255:25,0 chr2 216256364 . C . PASS END=216256503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:30:0,90,1078:0,90,255:40,0 chr2 216256504 . T . PASS END=216256506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 216256507 . G . PASS END=216256508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 216256509 . G . PASS END=216256533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:22:0,63,945:0,65,255:26,0 chr2 216256534 . A . PASS END=216256537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:22:0,51,765:0,66,255:19,0 chr2 216257654 . C . PASS END=216257661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,761:0,66,255:24,0 chr2 216257662 . T . PASS END=216257662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 216257663 . G . PASS END=216257668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,870:0,72,255:24,0 chr2 216257669 . G . PASS END=216257671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 216257672 . T . PASS END=216257672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 216257673 . A . PASS END=216257904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:89:32:0,89,1255:0,89,255:40,0 chr2 216257905 . A . PASS END=216257921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:69:36:0,69,1035:0,87,255:26,0 chr2 216257922 . C . PASS END=216257926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:48:37:0,48,720:0,98,255:19,0 chr2 216259251 . C . PASS END=216259251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 216259252 . T . PASS END=216259252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 216259253 . G . PASS END=216259398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:30:0,87,1094:0,90,255:40,0 chr2 216259399 . C . PASS END=216259399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,6:40:20:40:0,20,928:0,20,255:34,0 chr2 216259400 . T . PASS END=216259427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:33:0,83,1087:0,83,255:40,0 chr2 216259428 . T . PASS END=216259428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,995:0,76,255:28,0 chr2 216259429 . A . PASS END=216259430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 216259431 . A . PASS END=216259442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,931:0,64,255:26,0 chr2 216261860 . C . PASS END=216261860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,108,1620:0,111,255:36,0 chr2 216261861 . T . PASS END=216261861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1241:0,78,255:34,0 chr2 216261862 . G . PASS END=216261946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:37:0,93,1347:0,93,255:40,0 chr2 216262403 . G . PASS END=216262406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:31,0 chr2 216262407 . C . PASS END=216262407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 216262408 . A . PASS END=216262410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 216262411 . A . PASS END=216262411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 216262412 . C . PASS END=216262412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 216262413 . T . PASS END=216262413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:28,0 chr2 216262414 . T . PASS END=216262571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:32:0,84,1243:0,89,255:40,0 chr2 216263980 . C . PASS END=216263981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,117,1755:0,120,255:39,0 chr2 216263982 . T . PASS END=216264074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,81,255:40,0 chr2 216269112 . G . PASS END=216269119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,643:0,51,255:19,0 chr2 216269120 . A . PASS END=216269129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,743:0,60,255:24,0 chr2 216269130 . T . PASS END=216269130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 216269131 . G . PASS END=216269132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 216269133 . C . PASS END=216269133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 216269134 . T . PASS END=216269139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 216269140 . G . PASS END=216269140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 216269141 . C . PASS END=216269154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,872:0,62,255:25,0 chr2 216269155 . C . PASS END=216269159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,972:0,84,255:28,0 chr2 216269160 . T . PASS END=216269160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 216269161 . G . PASS END=216269164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1055:0,84,255:30,0 chr2 216269165 . A . PASS END=216269165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 216269166 . C . PASS END=216269326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:81:30:0,81,1215:0,83,255:40,0 chr2 216269327 . A . PASS END=216269332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:32:0,75,1125:0,80,255:26,0 chr2 216269333 . G . PASS END=216269336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 216269337 . C . PASS END=216269357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:25,0 chr2 216269358 . G . PASS END=216269358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:20,0 chr2 216269359 . G . PASS END=216269361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 216269362 . A . PASS END=216269362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 216269363 . G . PASS END=216269370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:21,0 chr2 216269371 . A . PASS END=216269371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 216269372 . T . PASS END=216269378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 216270961 . T . PASS END=216270989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:17:0,43,651:0,43,255:19,0 chr2 216270990 . C . PASS END=216271008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,837:0,63,255:26,0 chr2 216271009 . C . PASS END=216271010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 216271011 . G . PASS END=216271021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,802:0,64,255:26,0 chr2 216271022 . G . PASS END=216271147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1000:0,80,255:33,0 chr2 216271148 . T . PASS END=216271156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,80,255:25,0 chr2 216271157 . A . PASS END=216271157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1052:0,57,255:25,0 chr2 216271158 . G . PASS END=216271158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 216271159 . G . PASS END=216271159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:25,0 chr2 216271160 . C . PASS END=216271186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:26,0 chr2 216271187 . G . PASS END=216271187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:20,0 chr2 216271188 . T . PASS END=216271199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 216271200 . A . PASS END=216271225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,675:0,44,255:19,0 chr2 216271226 . C . PASS END=216271233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:11,0 chr2 216271850 . C . PASS END=216272030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:82:33:0,82,1133:0,82,255:40,0 chr2 216272031 . G . PASS END=216272034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,900:0,99,255:20,0 chr2 216272035 . A . PASS END=216272044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:51:21:0,51,765:0,63,255:19,0 chr2 216272831 . C . PASS END=216272893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:29:0,87,1054:0,87,255:38,0 chr2 216272894 . C . PASS END=216272895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:69:36:0,69,1196:0,69,255:33,0 chr2 216272896 . G . PASS END=216272899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:35:0,96,1440:0,105,255:34,0 chr2 216272900 . T G, 151.86 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,35,0:1.000,0.000:35:0,19,0:0,16,0:102:190,105,0,290,290,290:255,105,0:0,0:1.5186e+02,1.0186e+02,0.0000e+00,2.8663e+02,3.2140e+02,2.8964e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,22,13:0,0,18,17:216272900 chr2 216272901 . G . PASS END=216272906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 216272907 . A T, 153.48 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:103:191,106,0,291,291,291:255,108,0:0,0:1.5348e+02,1.0348e+02,0.0000e+00,2.8825e+02,3.2302e+02,2.9126e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,22:0,0,24,12:216272900 chr2 216272908 . G . PASS END=216272911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 216272912 . C . LowGQ END=216272912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,7:37:0:37:0,0,705:28,0,255:27,0 chr2 216272913 . A . PASS END=216272920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1260:0,105,255:34,0 chr2 216273021 . C . PASS END=216273149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:93:34:0,93,1395:0,98,255:40,0 chr2 216274286 . C . PASS END=216274308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:23:0,69,839:0,69,255:26,0 chr2 216274309 . T . PASS END=216274323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:31:0,89,1127:0,89,255:36,0 chr2 216274324 . T . PASS END=216274324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1241:0,75,255:34,0 chr2 216274325 . A . PASS END=216274436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1177:0,90,255:37,0 chr2 216274437 . A . PASS END=216274437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:26,0 chr2 216274438 . G . PASS END=216274438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:23,0 chr2 216274439 . T . PASS END=216274453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,895:0,67,255:24,0 chr2 216274454 . C . PASS END=216274462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:23:0,45,675:0,69,255:19,0 chr2 216274657 . T . PASS END=216274807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:37:0,87,1305:0,90,255:40,2 chr2 216274808 . A . PASS END=216274824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:28:0,66,990:0,84,255:26,0 chr2 216274825 . C . PASS END=216274837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:24:0,54,810:0,62,255:19,0 chr2 216279527 . T . PASS END=216279678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:29:0,81,1143:0,85,255:40,0 chr2 216279679 . A . PASS END=216279681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 216283965 . T . PASS END=216283974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,762:0,60,255:25,0 chr2 216283975 . C . PASS END=216283995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1089:0,80,255:34,0 chr2 216283996 . C . PASS END=216284108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:35:0,96,1327:0,96,255:40,0 chr2 216285396 . C . PASS END=216285399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 216285400 . G . PASS END=216285400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:25,0 chr2 216285401 . G . PASS END=216285404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 216285405 . C . PASS END=216285405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 216285406 . A . PASS END=216285411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1188:0,93,255:32,0 chr2 216285412 . C . PASS END=216285412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:31,0 chr2 216285413 . C . PASS END=216285456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:98:34:0,98,1235:0,98,255:40,0 chr2 216285457 . C . PASS END=216285457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1271:0,52,255:39,0 chr2 216285458 . C . PASS END=216285524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:30:0,84,1260:0,90,255:40,0 chr2 216286814 . C . PASS END=216286826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,929:0,62,255:25,0 chr2 216286827 . G . PASS END=216286827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:24,0 chr2 216286828 . T . PASS END=216286834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:77:26:0,77,931:0,77,255:30,0 chr2 216286835 . T . PASS END=216286944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:81:31:0,81,1202:0,93,255:40,0 chr2 216286945 . G . PASS END=216286945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 216286946 . T . PASS END=216286949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 216286950 . G . PASS END=216286958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,71,255:26,0 chr2 216286959 . C . PASS END=216286959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:22,0 chr2 216286960 . T . PASS END=216286962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:23,0 chr2 216286963 . T . PASS END=216286963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:22,0 chr2 216286964 . G . PASS END=216286966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 216288073 . C . PASS END=216288074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 216288075 . G . PASS END=216288086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 216288087 . A . PASS END=216288087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 216288088 . A . PASS END=216288096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 216288097 . T . PASS END=216288097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:29,0 chr2 216288098 . C . PASS END=216288232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:30:0,87,1064:0,88,255:37,0 chr2 216288233 . T . PASS END=216288233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1108:0,55,255:29,0 chr2 216288234 . C . PASS END=216288237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 216288238 . T . PASS END=216288238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 216288239 . C . PASS END=216288248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1058:0,90,255:30,0 chr2 216288249 . A . PASS END=216288249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr2 216288869 . C . PASS END=216288878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,105,1295:0,105,255:40,0 chr2 216288879 . T . PASS END=216288977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:41:0,118,1629:0,118,255:40,0 chr2 216288978 . C . PASS END=216289014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:38:0,93,1395:0,94,255:40,0 chr2 216289015 . C T, 49.03 PASS DP=36;MQ=250.00;MQRankSum=5.078;ReadPosRankSum=2.435;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,16,0:0.444,0.000:36:11,6,0:9,10,0:48:84,0,50,564,707,1272:255,0,255:17,0:4.9032e+01,7.6105e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,7,4,12:14,6,8,8 chr2 216289016 . C . PASS END=216289048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1117:0,80,255:36,0 chr2 216289817 . C . PASS END=216289820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 216289821 . C . PASS END=216289822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 216289823 . C . PASS END=216289830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 216289831 . C . PASS END=216289831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 216289832 . T . PASS END=216289858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:23:0,64,853:0,64,255:26,0 chr2 216289859 . G . PASS END=216289859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 216289860 . C . PASS END=216289860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 216289861 . A . PASS END=216289867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 216289868 . T . PASS END=216289870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,1016:0,48,255:29,0 chr2 216289871 . T . PASS END=216289871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 216289872 . T . PASS END=216289894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr2 216289895 . T . PASS END=216289897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 216289898 . C . PASS END=216289899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 216289900 . A . PASS END=216289902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1108:0,77,255:26,0 chr2 216289903 . G . PASS END=216289928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:33:0,93,1371:0,95,255:34,0 chr2 216289929 . A . PASS END=216289929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1105:0,52,255:30,0 chr2 216289930 . C . PASS END=216289930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 216289931 . A . PASS END=216289931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1111:0,72,255:30,0 chr2 216289932 . G . PASS END=216289957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:32:0,81,1087:0,82,255:33,0 chr2 216289958 . G . PASS END=216290002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:23:0,63,939:0,67,255:26,0 chr2 216290003 . C . PASS END=216290008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:22:0,52,754:0,52,255:19,0 chr2 216292903 . C . PASS END=216292912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 216292913 . G . PASS END=216292913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:22,0 chr2 216292914 . G . PASS END=216292917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,831:0,69,255:26,0 chr2 216292918 . G . PASS END=216292934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:31,0 chr2 216292935 . T . PASS END=216292935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 216292936 . C . PASS END=216292937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 216292938 . C . PASS END=216292938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr2 216292939 . A . PASS END=216293030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1280:0,87,255:40,0 chr2 216293031 . G . PASS END=216293045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:72:31:0,72,1080:0,72,255:29,0 chr2 216293046 . T . PASS END=216293046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:24,0 chr2 216293047 . G . PASS END=216293051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:25,0 chr2 216293052 . T . PASS END=216293061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:51:25:0,51,765:0,75,255:19,0 chr2 216295437 . C . PASS END=216295562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:36:0,80,1319:0,80,255:40,0 chr2 216295563 . A . PASS END=216295563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1205:0,69,255:32,0 chr2 216295564 . A . PASS END=216295575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1139:0,80,255:32,0 chr2 216296556 . C . PASS END=216296556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1213:0,99,255:33,0 chr2 216296557 . T . PASS END=216296557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 216296558 . A . PASS END=216296679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1215:0,86,255:40,0 chr2 216296680 . G . PASS END=216296682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:30:0,78,1170:0,90,255:26,0 chr2 216296683 . G . PASS END=216296683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:25,0 chr2 216296684 . C . PASS END=216296687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 216298047 . T . PASS END=216298058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,629:0,44,255:19,0 chr2 216298059 . A . PASS END=216298064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:23:0,63,945:0,67,255:26,0 chr2 216298065 . T . PASS END=216298072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,995:0,84,255:31,0 chr2 216298073 . C . PASS END=216298073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 216298074 . G . PASS END=216298083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:31:0,93,1157:0,93,255:35,0 chr2 216298084 . G A, 49.44 PASS DP=35;MQ=250.00;MQRankSum=5.017;ReadPosRankSum=3.493;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,16,0:0.457,0.000:35:8,9,0:11,7,0:48:84,0,50,564,680,1244:255,0,255:19,0:4.9438e+01,7.1187e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,10,6:10,9,11,5 chr2 216298085 . A . PASS END=216298121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:36:0,80,1272:0,80,255:40,0 chr2 216298122 . G . PASS END=216298157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:30:0,80,1163:0,80,255:39,0 chr2 216298158 . T . PASS END=216298158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr2 216298159 . G . PASS END=216298160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 216298161 . A . PASS END=216298184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,833:0,61,255:26,0 chr2 216299419 . C . PASS END=216299526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:46:0,114,1710:0,125,255:40,0 chr2 216299527 . T . PASS END=216299538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:40:0,81,1215:0,93,255:37,0 chr2 216299539 . A . PASS END=216299547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:69:34:0,69,1035:0,102,255:26,0 chr2 216300378 . G . PASS END=216300384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:23,0 chr2 216300385 . T . PASS END=216300385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,808:0,55,255:22,0 chr2 216300386 . T . PASS END=216300403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,939:0,72,255:26,0 chr2 216300404 . G . PASS END=216300423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1039:0,81,255:30,0 chr2 216300424 . C . PASS END=216300424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 216300425 . T . PASS END=216300443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:29,0 chr2 216300444 . T . PASS END=216300444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 216300445 . C . PASS END=216300466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:32,0 chr2 216300467 . G . PASS END=216300467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:29,0 chr2 216300468 . C . PASS END=216300481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1133:0,90,255:30,0 chr2 216300482 . T A, 137.29 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,18,0:0,12,0:87:175,90,0,1155,90,1155:255,90,0:0,0:1.3729e+02,8.7289e+01,0.0000e+00,4.5000e+02,1.2206e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,14:0,0,20,10 chr2 216300483 . G . PASS END=216300488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr2 216300489 . C . PASS END=216300497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,87,255:24,0 chr2 216300498 . G . PASS END=216300502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr2 216300503 . C . PASS END=216300509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 216300510 . C . PASS END=216300519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 216300520 . A . PASS END=216300525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:17,0 chr2 216809586 . T . PASS END=216809592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,992:0,78,255:26,0 chr2 216809593 . C . PASS END=216809599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1031:0,84,255:28,0 chr2 216809600 . A . PASS END=216809600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:28,0 chr2 216809601 . C . PASS END=216809693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1172:0,83,255:39,0 chr2 216809694 . T . PASS END=216809694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr2 216809695 . G . PASS END=216809699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,90,255:29,0 chr2 216809700 . A . PASS END=216809700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 216809701 . T . PASS END=216809705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 216809706 . T . PASS END=216809720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:26,0 chr2 216810294 . C . PASS END=216810303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:29:0,83,972:0,83,255:32,0 chr2 216810304 . A . PASS END=216810304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1081:0,60,255:32,0 chr2 216810305 . G . PASS END=216810312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1111:0,82,255:40,0 chr2 216810313 . T . PASS END=216810313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1372:0,76,255:39,0 chr2 216810314 . C . PASS END=216810430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:96:42:0,96,1414:0,96,255:40,0 chr2 216810431 . A . PASS END=216810457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:38:0,90,1350:0,105,255:37,0 chr2 216811746 . C . PASS END=216811812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:32:0,81,1215:0,84,255:40,0 chr2 216811813 . A . PASS END=216811813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 216811814 . T . PASS END=216811814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 216811815 . C . PASS END=216811833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,914:0,62,255:26,0 chr2 216811834 . C . PASS END=216811834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:20,0 chr2 216811835 . T . PASS END=216811835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:21,0 chr2 216811836 . C . PASS END=216811836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 216820384 . C . PASS END=216820391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:73:0,120,1800:0,220,255:40,0 chr2 216820392 . A . PASS END=216820407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:73:0,120,1800:0,147,255:40,0 chr2 216825832 . C . PASS END=216825832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:15,0 chr2 216825833 . T . PASS END=216825833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:14,0 chr2 216825834 . T . PASS END=216825852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:18,0 chr2 216825853 . G . PASS END=216825853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr2 216825854 . G . PASS END=216825859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 216825860 . G . PASS END=216825863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr2 216825864 . A . PASS END=216825864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 216825865 . G . PASS END=216825874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,823:0,62,255:26,0 chr2 216825875 . G . PASS END=216825881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 216825882 . G . PASS END=216825884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 216825885 . G . PASS END=216825941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1143:0,83,255:32,0 chr2 216825942 . T . PASS END=216825942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr2 216825943 . A . PASS END=216825948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:31,0 chr2 216825949 . T . PASS END=216825949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:28,0 chr2 216825950 . A . PASS END=216825957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 216825958 . T . PASS END=216825964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,893:0,67,255:25,0 chr2 216825965 . C . PASS END=216825967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:54:29:0,54,810:0,87,255:19,0 chr2 216825968 . C . PASS END=216825970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 216825971 . T . PASS END=216825974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:26:0,57,855:0,78,255:19,0 chr2 216825975 . G . PASS END=216825975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 216825976 . C . PASS END=216825976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 216825977 . A . PASS END=216825977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 216825978 . C . PASS END=216825981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr2 216861029 . C . PASS END=216861188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:87:37:0,87,1305:0,111,255:40,0 chr2 216877956 . C . PASS END=216877970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1125:0,90,255:32,0 chr2 216877971 . T . PASS END=216878007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1134:0,83,255:36,0 chr2 216878008 . C G, 154.91 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,24,0:0,12,0:105:193,108,0,1366,108,1366:255,108,0:0,0:1.5491e+02,1.0491e+02,0.0000e+00,4.5000e+02,1.3968e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,22:0,0,14,22 chr2 216878009 . G . PASS END=216878021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:36:0,93,1395:0,108,255:35,0 chr2 216878022 . A . PASS END=216878036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:25:0,63,945:0,75,255:24,0 chr2 216878037 . T . PASS END=216878037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:19,0 chr2 216878038 . C . PASS END=216878040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 216878041 . T . PASS END=216878045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:42:24:0,42,630:0,56,255:20,0 chr2 216878046 . C . PASS END=216878050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:14,0 chr2 216903998 . T . PASS END=216904083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:33:0,81,1215:0,89,255:40,0 chr2 216908627 . C . PASS END=216908641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:40:0,104,1451:0,104,255:40,0 chr2 216908642 . A . PASS END=216908678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:47:0,120,1800:0,123,255:40,0 chr2 216908679 . C T, 47.97 PASS DP=59;MQ=249.72;MQRankSum=6.512;ReadPosRankSum=3.689;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:34,25,0:0.424,0.000:59:14,13,0:20,12,0:47:83,0,50,870,1200,2070:255,0,255:33,0:4.7966e+01,9.1120e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:18,16,13,12:12,22,11,14 chr2 216908680 . G . PASS END=216908716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,149,255:40,0 chr2 216908717 . G . PASS END=216908738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,120,1800:0,129,255:40,0 chr2 216913986 . C . PASS END=216914096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:35:0,90,1350:0,105,255:40,0 chr2 216916172 . A . PASS END=216916268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:92:36:0,92,1310:0,92,255:40,0 chr2 216923618 . A . PASS END=216923699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:62:0,120,1800:0,153,255:40,0 chr2 216930035 . C . PASS END=216930036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 216930037 . G . PASS END=216930065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,897:0,81,255:38,0 chr2 216930066 . G . PASS END=216930066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1321:0,75,255:37,0 chr2 216930067 . T . PASS END=216930200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:35:0,87,1274:0,89,255:40,0 chr2 216931108 . C . PASS END=216931241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:36:0,93,1363:0,108,255:40,0 chr2 216946341 . C . PASS END=216946342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 216946343 . A . PASS END=216946358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:16,0 chr2 216946359 . T . PASS END=216946359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 216946360 . C . PASS END=216946388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,631:0,51,255:19,0 chr2 216946389 . C . PASS END=216946399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 216946400 . A . PASS END=216946454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,605:0,40,255:19,0 chr2 216946455 . A . PASS END=216946461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 216946462 . C . PASS END=216946464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 216960687 . A . PASS END=216960704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,635:0,51,255:19,0 chr2 216960705 . G . PASS END=216960708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 216960709 . A . PASS END=216960709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,742:0,50,255:21,0 chr2 216960710 . A . PASS END=216960742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,817:0,69,255:25,0 chr2 216960743 . C . PASS END=216960743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:23,0 chr2 216960744 . T . PASS END=216960745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 216960746 . T . PASS END=216960913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1141:0,84,255:40,0 chr2 216960914 . A . PASS END=216960914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:68:43:0,68,1467:0,68,255:28,0 chr2 216960915 . G . PASS END=216960927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:34:0,87,1305:0,102,255:32,0 chr2 216960928 . A . PASS END=216960929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:66:33:0,66,1056:0,66,255:29,0 chr2 216960930 . G . PASS END=216960930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 216960931 . A . PASS END=216960940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:31:0,60,900:0,77,255:25,0 chr2 216960941 . C . PASS END=216960957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:40:18:0,40,629:0,40,255:19,0 chr2 216964643 . A . PASS END=216964647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,111,1665:0,117,255:39,0 chr2 216964648 . T . PASS END=216964648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1385:0,71,255:36,0 chr2 216964649 . G . PASS END=216964739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:86:39:0,86,1496:0,86,255:40,0 chr2 216964740 . A . PASS END=216964740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1449:0,79,255:35,0 chr2 216964741 . T . PASS END=216964806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1215:0,82,255:40,0 chr2 216964807 . G . PASS END=216964807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 216964808 . G . PASS END=216964810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:44:32:0,44,1107:0,44,255:30,0 chr2 216964811 . G . PASS END=216964811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:30,0 chr2 216964812 . A . PASS END=216964831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 216964832 . C . PASS END=216964834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 216964835 . A . PASS END=216964837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:28,0 chr2 216964838 . G . PASS END=216964850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1080:0,74,255:26,0 chr2 216964851 . G . PASS END=216964851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 216964852 . G . PASS END=216964853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 216964854 . C . PASS END=216964862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 216964863 . G . PASS END=216964863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 216964864 . C . PASS END=216964873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1200:0,83,255:30,0 chr2 216964874 . T . PASS END=216964874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 216964875 . G . PASS END=216964921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1078:0,80,255:34,0 chr2 216964922 . C . PASS END=216964922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 216964923 . T . PASS END=216964928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1178:0,83,255:31,0 chr2 216964929 . C . PASS END=216964943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:71:27:0,71,1016:0,71,255:26,0 chr2 216964944 . C . PASS END=216964944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 216964945 . C . PASS END=216964967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,931:0,64,255:25,0 chr2 216964968 . C . PASS END=216964968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 216964969 . T . PASS END=216964969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 216964970 . T . PASS END=216964970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr2 216964971 . C . PASS END=216964973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 216964974 . G . PASS END=216964983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:19,0 chr2 216964984 . T . PASS END=216964984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,704:0,30,255:16,0 chr2 216964985 . C . PASS END=216965006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,49,255:19,0 chr2 216965007 . C . PASS END=216965010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 216965011 . T . PASS END=216965011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 216965012 . A . PASS END=216965023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 216965024 . T . PASS END=216965028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 216965029 . G . PASS END=216965040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,740:0,66,255:22,0 chr2 216965041 . T . PASS END=216965041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 216965042 . C . PASS END=216965043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,799:0,66,255:22,0 chr2 216965044 . C . PASS END=216965044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,766:0,50,255:21,0 chr2 216965045 . T . PASS END=216965048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 216965049 . C . PASS END=216965049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 216965050 . C . PASS END=216965060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:25,0 chr2 216965061 . T . PASS END=216965061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 216965062 . G . PASS END=216965080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,908:0,72,255:26,0 chr2 216965081 . C . PASS END=216965081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216965082 . C . PASS END=216965088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 216965089 . G . PASS END=216965091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216965092 . T . PASS END=216965096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 216965097 . G . PASS END=216965097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr2 216965098 . C . PASS END=216965098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 216965099 . A . PASS END=216965100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 216965101 . G . PASS END=216965103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 216965104 . G . PASS END=216965133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 216965134 . T . PASS END=216965135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 216965136 . G . PASS END=216965161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr2 216965162 . A . PASS END=216965162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 216965163 . C . PASS END=216965220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1142:0,80,255:34,0 chr2 216965221 . T . PASS END=216965265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,862:0,61,255:26,0 chr2 216974160 . A . PASS END=216974172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,969:0,72,255:25,0 chr2 216974173 . G . PASS END=216974173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 216974174 . G . PASS END=216974176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 216974177 . T . PASS END=216974180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 216977739 . G . PASS END=216977852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:86:33:0,86,1210:0,86,255:40,0 chr2 216981367 . G . PASS END=216981383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,111,1312:0,111,255:39,0 chr2 216981384 . G . PASS END=216981384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:38,0 chr2 216981385 . T . PASS END=216981554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:37:0,87,1246:0,96,255:40,0 chr2 216981555 . A . PASS END=216981565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:32:0,69,1035:0,78,255:27,0 chr2 216982469 . T . PASS END=216982517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:70:0,120,1800:0,183,255:40,0 chr2 216983766 . A . PASS END=216983888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:50:0,120,1800:0,148,255:40,0 chr2 216986785 . C . PASS END=216986799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,922:0,62,255:26,0 chr2 216986800 . T . PASS END=216986808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:29,0 chr2 216986809 . A . PASS END=216986809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 216986810 . G . PASS END=216986811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 216986812 . T . PASS END=216986812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 216986813 . G . PASS END=216986822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1111:0,83,255:36,0 chr2 216986823 . A . PASS END=216986823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:34,0 chr2 216986824 . C . PASS END=216986954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:33:0,84,1260:0,90,255:40,0 chr2 216986955 . T . PASS END=216986956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1084:0,74,255:27,0 chr2 216986957 . G . PASS END=216986959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 216986960 . G . PASS END=216986976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,978:0,67,255:26,0 chr2 216990640 . T . PASS END=216990754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:36:0,94,1139:0,94,255:40,0 chr2 216992259 . A . PASS END=216992397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:113,0:113:99:74:0,120,1800:0,220,255:40,0 chr2 216995598 . G . PASS END=216995710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:53:0,105,1575:0,140,255:40,0 chr2 216997048 . G . PASS END=216997110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,100,1657:0,100,255:40,0 chr2 217001811 . G . PASS END=217001948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:41:0,116,1627:0,116,255:40,0 chr2 217002812 . T . PASS END=217002902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:34:0,102,1280:0,102,255:40,0 chr2 217005909 . A . PASS END=217006042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:90:34:0,90,1165:0,90,255:40,0 chr2 217012806 . T . PASS END=217012808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 217012809 . C . PASS END=217012863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1072:0,87,255:40,0 chr2 217012864 . T . PASS END=217012900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,120,1800:0,129,255:40,0 chr2 217012901 . A G, 230.12 PASS DP=62;MQ=249.47;FractionInformativeReads=0.984 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,61,0:1.000,0.000:61:0,31,0:0,30,0:180:268,183,0,2325,183,2325:255,183,0:0,0:2.3012e+02,1.8012e+02,0.0000e+00,4.5000e+02,2.1489e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,34,27:0,0,32,29 chr2 217012902 . A . PASS END=217012938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,155,255:40,0 chr2 217012939 . T . PASS END=217012999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:47:0,117,1755:0,125,255:40,0 chr2 217024791 . C . PASS END=217024794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1133:0,93,255:31,0 chr2 217024795 . G . PASS END=217024795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 217024796 . A . PASS END=217024878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:31:0,80,1180:0,80,255:40,0 chr2 217024879 . A . PASS END=217024879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1006:0,57,255:26,0 chr2 217024880 . C . PASS END=217024884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 217026702 . G . PASS END=217026771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:53:0,120,1800:0,132,255:40,0 chr2 217054948 . C . PASS END=217055057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:48:0,120,1800:0,129,255:40,0 chr2 217057362 . T . PASS END=217057458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:39:0,84,1421:0,84,255:40,0 chr2 217059642 . A . PASS END=217059709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:58:0,120,1800:0,174,255:40,0 chr2 217069045 . T . PASS END=217069113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:75:0,120,1800:0,206,255:40,0 chr2 217069114 . G . PASS END=217069119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,209,255:40,0 chr2 217069911 . T . PASS END=217069925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:80:0,120,1800:0,223,255:40,0 chr2 217070376 . A . PASS END=217070376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 217124035 . T . PASS END=217124041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 217124042 . G . PASS END=217124047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,388:0,33,255:12,0 chr2 217124048 . A . PASS END=217124048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 217124049 . C . PASS END=217124060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 217124061 . G . PASS END=217124074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:15,0 chr2 217124075 . C . PASS END=217124075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 217124076 . C . PASS END=217124082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 217124083 . A . PASS END=217124086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 217124087 . C . PASS END=217124087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 217124088 . G . PASS END=217124105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 217124106 . A . PASS END=217124106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 217124107 . G . PASS END=217124108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 217124109 . G . PASS END=217124140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:15:0,40,582:0,40,255:18,0 chr2 217124141 . T . PASS END=217124141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 217124142 . G . PASS END=217124143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 217124144 . T . PASS END=217124150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr2 217124151 . A . PASS END=217124151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 217124152 . C . PASS END=217124171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,723:0,63,255:21,0 chr2 217124172 . C . PASS END=217124188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,729:0,47,255:20,0 chr2 217124189 . C . PASS END=217124190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 217124191 . C . PASS END=217124192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 217124193 . G . PASS END=217124194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 217124195 . T . PASS END=217124214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 217124215 . G . PASS END=217124233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,668:0,60,255:22,0 chr2 217124234 . G . PASS END=217124234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr2 217124235 . G . PASS END=217124236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 217124237 . A . PASS END=217124237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 217124238 . T . PASS END=217124238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 217124239 . A . PASS END=217124239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,776:0,38,255:20,0 chr2 217124240 . T . PASS END=217124247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,798:0,63,255:23,0 chr2 217124248 . G . PASS END=217124248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 217124249 . G . PASS END=217124318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,710:0,62,255:24,0 chr2 217124319 . A . PASS END=217124319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 217124320 . G . PASS END=217124330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 217124331 . T . PASS END=217124331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 217124332 . C . PASS END=217124332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 217124333 . C . PASS END=217124333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 217124334 . A . PASS END=217124335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 217124336 . T . LowGQ END=217124336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:0:25:0,0,745:11,0,255:21,0 chr2 217124337 . G . PASS END=217124337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 217124338 . C . PASS END=217124338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 217124339 . T . PASS END=217124346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 217124347 . A . PASS END=217124347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 217124348 . G . PASS END=217124365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 217124366 . A . PASS END=217124366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 217124367 . T . PASS END=217124367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 217124368 . G . PASS END=217124368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 217124369 . C . PASS END=217124369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 217124370 . G . PASS END=217124370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:19,0 chr2 217124371 . G . PASS END=217124371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:19,0 chr2 217124372 . T . PASS END=217124372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 217124373 . A . PASS END=217124395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 217124396 . A . PASS END=217124402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:15:0,33,495:0,34,255:13,0 chr2 217142395 . C . PASS END=217142571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:34:0,87,1305:0,102,255:40,0 chr2 217142572 . G . PASS END=217142587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:28:0,68,998:0,68,255:26,0 chr2 217148297 . C . PASS END=217148303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 217148304 . G . PASS END=217148304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 217148305 . G . PASS END=217148311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,480:0,42,255:14,0 chr2 217148312 . T . PASS END=217148312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 217148313 . G . PASS END=217148318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 217148319 . A . PASS END=217148320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 217148321 . G . PASS END=217148342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,598:0,48,255:17,0 chr2 217148343 . T . PASS END=217148343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 217148344 . A . PASS END=217148356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,659:0,51,255:19,0 chr2 217148357 . G . PASS END=217148357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 217148358 . C . PASS END=217148364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 217148365 . A . PASS END=217148365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,627:0,5,255:17,0 chr2 217148366 . G . PASS END=217148367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 217148368 . C . PASS END=217148375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:22,0 chr2 217148376 . C . PASS END=217148377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 217148378 . G . PASS END=217148379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 217148380 . T . PASS END=217148382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 217148383 . A . PASS END=217148383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 217148384 . C . PASS END=217148387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 217148388 . A . PASS END=217148388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 217148389 . T . PASS END=217148395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 217148396 . A . PASS END=217148396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 217148397 . G . PASS END=217148407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,823:0,66,255:22,0 chr2 217148408 . G . PASS END=217148408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 217148409 . C . PASS END=217148410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 217148411 . C . PASS END=217148411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:20,0 chr2 217148412 . T . PASS END=217148412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,729:0,49,255:21,0 chr2 217148413 . T . PASS END=217148414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 217148415 . A . PASS END=217148416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 217148417 . C A, 110.20 PASS DP=21;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,10,0:0,11,0:60:148,63,0,814,63,814:255,66,0:0,0:1.1020e+02,6.0204e+01,4.1418e-06,4.5000e+02,9.4974e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,13:0,0,13,8 chr2 217148418 . G . PASS END=217148452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,652:0,54,255:19,0 chr2 217234468 . C . PASS END=217234473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr2 217234474 . T . PASS END=217234474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,1 chr2 217234475 . G . PASS END=217234475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:22:19:0,22,663:0,22,255:18,1 chr2 217234476 . G . PASS END=217234476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:19,0 chr2 217234477 . C . PASS END=217234494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,673:0,41,255:19,0 chr2 217234495 . G . PASS END=217234498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 217234499 . A . PASS END=217234499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:19,0 chr2 217234500 . G . PASS END=217234517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:24,0 chr2 217234518 . T . PASS END=217234518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 217234519 . G . PASS END=217234530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,876:0,72,255:25,0 chr2 217234531 . G . PASS END=217234531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr2 217234532 . C . PASS END=217234551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,917:0,62,255:25,0 chr2 217234552 . G . PASS END=217234552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 217234553 . G . PASS END=217234580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,870:0,62,255:25,0 chr2 217234581 . A . PASS END=217234582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 217234583 . G . PASS END=217234583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 217234584 . C . PASS END=217234584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:21,0 chr2 217234585 . A . PASS END=217234586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:22,0 chr2 217234587 . T . PASS END=217234587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 217234588 . G . PASS END=217234603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 217234604 . G . PASS END=217234631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:15:0,42,529:0,45,255:18,0 chr2 217234632 . C . PASS END=217234632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 217234633 . A . PASS END=217234634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 217234635 . C . PASS END=217234643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 217234644 . A . PASS END=217234644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 217234645 . A . PASS END=217234647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr2 217234648 . A . PASS END=217234648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 217234649 . G . PASS END=217234659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 217234660 . G . PASS END=217234660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 217234661 . G . PASS END=217234661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 217234662 . G . PASS END=217234667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 217234668 . G . PASS END=217234668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:12,0 chr2 217234669 . T . PASS END=217234680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr2 217234681 . G . PASS END=217234681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 217234682 . G . PASS END=217234682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 217234683 . G . PASS END=217234683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr2 217234684 . C . PASS END=217234685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 217234686 . C . PASS END=217234686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 217234687 . C . PASS END=217234689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 217234690 . G . PASS END=217234695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 217234696 . C . PASS END=217234696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:8,0 chr2 217234697 . A . PASS END=217234724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,266:0,24,255:9,0 chr2 217234725 . A . PASS END=217234728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 217234729 . C . LowGQ END=217234729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:7,0,239:6,0 chr2 217234730 . C . PASS END=217234737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,249:6,0 chr2 217234738 . C . PASS END=217234766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr2 217234767 . A . PASS END=217234767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:7,0 chr2 217234768 . A . PASS END=217234803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,266:0,24,255:9,0 chr2 217234804 . C . PASS END=217234817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,441:0,33,255:12,0 chr2 217234818 . G . PASS END=217234818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 217234819 . C . PASS END=217234840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:13,0 chr2 217234841 . T . PASS END=217234867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,512:0,42,255:21,0 chr2 217234868 . T . PASS END=217234874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,990:0,69,255:25,0 chr2 217234875 . G . PASS END=217234875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 217234876 . A . PASS END=217234876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,951:0,65,255:26,0 chr2 217234877 . C . PASS END=217234908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1096:0,80,255:34,0 chr2 217234909 . A . PASS END=217234909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:35,0 chr2 217234910 . C . PASS END=217234924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:38,0 chr2 217234925 . T . PASS END=217234925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr2 217234926 . A . PASS END=217234969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:89:35:0,89,1271:0,89,255:38,0 chr2 217234970 . A . PASS END=217234970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,2 chr2 217234971 . G . PASS END=217234971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1194:0,36,255:32,2 chr2 217234972 . G . PASS END=217234972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1196:0,63,255:33,0 chr2 217234973 . G . PASS END=217234983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1208:0,83,255:32,0 chr2 217277151 . T . PASS END=217277151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 217277167 . G . PASS END=217277167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 217277205 . C . PASS END=217277205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 217277297 . C . PASS END=217277297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 217277303 . G . PASS END=217277303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 217277326 . G . PASS END=217277326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 217277353 . G . PASS END=217277353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 217278592 . T . PASS END=217278592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:68:0,120,1800:0,205,255:40,0 chr2 217279380 . C . PASS END=217279380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:63:0,120,1800:0,189,255:40,0 chr2 217279428 . A . PASS END=217279886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:87:32:0,87,1305:0,88,255:40,1 chr2 217279887 . A . PASS END=217279887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1119:0,60,255:29,0 chr2 217279888 . T . PASS END=217279888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 217279889 . C . PASS END=217279890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 217279891 . G . PASS END=217279891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:30,0 chr2 217279892 . G . PASS END=217279892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 217279893 . T . PASS END=217279898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1143:0,60,255:32,0 chr2 217279899 . C . PASS END=217279899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 217279900 . C . PASS END=217279901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:31,0 chr2 217279902 . T . PASS END=217279903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:43:33:0,43,997:0,43,255:31,0 chr2 217279904 . T . PASS END=217279908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:33,0 chr2 217279909 . A . PASS END=217279948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1225:0,86,255:36,0 chr2 217279949 . A . PASS END=217279949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1166:0,75,255:34,0 chr2 217279950 . G . PASS END=217279963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:35:0,87,1173:0,91,255:36,0 chr2 217279964 . T . PASS END=217279965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 217279966 . C . PASS END=217279977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1147:0,80,255:32,0 chr2 217279978 . C . PASS END=217279988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:68:28:0,68,992:0,68,255:25,0 chr2 217279989 . G . PASS END=217279989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,955:0,45,255:25,0 chr2 217279990 . C . PASS END=217279991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 217279992 . A . PASS END=217279999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 217280000 . G . PASS END=217280009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 217280010 . G . PASS END=217280011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:29,0 chr2 217280012 . A . PASS END=217280028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1101:0,80,255:32,0 chr2 217280029 . G . PASS END=217280032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:64:34:0,64,1225:0,64,255:31,0 chr2 217280033 . G . PASS END=217280051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:83:33:0,83,1216:0,83,255:34,0 chr2 217280052 . T . PASS END=217280052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:47:34:0,47,1125:0,47,255:29,0 chr2 217280053 . C . PASS END=217280206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:33:0,80,1246:0,80,255:40,0 chr2 217280207 . A . PASS END=217280207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1335:0,70,255:32,0 chr2 217280208 . G . PASS END=217280212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:38:0,84,1260:0,101,255:28,0 chr2 217280213 . T . PASS END=217280214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:66:38:0,66,990:0,97,255:22,0 chr2 217280215 . A . PASS END=217280230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:25:0,42,630:0,59,255:19,0 chr2 217280231 . G . PASS END=217280231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:12,0 chr2 217280232 . A . PASS END=217280233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:41:25:0,41,630:0,41,255:14,0 chr2 217280234 . T . PASS END=217280238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:33:24:0,33,495:0,42,255:13,0 chr2 217280965 . T . PASS END=217280965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 217280980 . A . PASS END=217281030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:55:0,120,1800:0,153,255:40,0 chr2 217285013 . C . PASS END=217285013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 217285018 . G . PASS END=217285018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 217285020 . A . PASS END=217285020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 217285022 . T . PASS END=217285029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,992:0,81,255:27,0 chr2 217285030 . G . PASS END=217285030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 217285031 . C . PASS END=217285033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1135:0,93,255:31,0 chr2 217285034 . A . PASS END=217285034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 217285035 . G . PASS END=217285045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1140:0,83,255:37,0 chr2 217285046 . C . PASS END=217285046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:35,0 chr2 217285047 . G . PASS END=217285066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:37:0,95,1355:0,95,255:40,0 chr2 217285067 . A . PASS END=217285103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,114,1582:0,116,255:40,0 chr2 217285104 . C G, 49.96 PASS DP=45;MQ=250.00;MQRankSum=5.733;ReadPosRankSum=1.578;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,22,0:0.489,0.000:45:9,12,0:14,10,0:48:85,0,50,787,823,1609:255,0,255:21,0:4.9958e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,9,13,9:10,13,13,9 chr2 217285105 . A . PASS END=217285141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:44:0,102,1480:0,102,255:40,0 chr2 217285142 . T . PASS END=217285259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:86:45:0,86,1607:0,86,255:40,0 chr2 217288356 . A . PASS END=217288406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:66:0,120,1800:0,158,255:40,0 chr2 217288414 . G . PASS END=217288414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,167,255:40,0 chr2 217293319 . T . PASS END=217293333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,886:0,61,255:25,0 chr2 217293334 . G . PASS END=217293334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,878:0,47,255:24,0 chr2 217293335 . C . PASS END=217293350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,922:0,62,255:26,0 chr2 217293351 . C . PASS END=217293353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 217293354 . G . PASS END=217293354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1050:0,60,255:28,0 chr2 217293355 . A . PASS END=217293358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:30,0 chr2 217293359 . T . PASS END=217293360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:63:32:0,63,1023:0,63,255:30,0 chr2 217293361 . T . PASS END=217293361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:33:0,82,1073:0,82,255:31,0 chr2 217293362 . G . PASS END=217293363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:42:36:0,42,1091:0,42,255:34,2 chr2 217293364 . C . PASS END=217293364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:35,0 chr2 217293365 . C . PASS END=217293502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:36:0,83,1381:0,83,255:40,0 chr2 217293503 . C . PASS END=217293503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1284:0,78,255:31,0 chr2 217293504 . A . PASS END=217293504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1258:0,91,255:32,0 chr2 217293505 . A . PASS END=217293505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1227:0,77,255:32,0 chr2 217297441 . T . PASS END=217297461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:14:0,40,504:0,40,255:19,0 chr2 217297462 . C . PASS END=217297465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr2 217297466 . C . PASS END=217297468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:22,0 chr2 217297469 . C . PASS END=217297474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:24,0 chr2 217297475 . G . PASS END=217297478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 217297479 . A . PASS END=217297481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 217297482 . A . PASS END=217297488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 217297489 . C . PASS END=217297491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 217297492 . G . PASS END=217297508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1041:0,84,255:29,0 chr2 217297509 . C . PASS END=217297509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 217297510 . C . PASS END=217297512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 217297513 . C . PASS END=217297529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,1125:0,78,255:26,0 chr2 217297530 . A . PASS END=217297535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 217297536 . A . PASS END=217297536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,945:0,54,255:27,0 chr2 217297537 . G . PASS END=217297540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 217297541 . T . PASS END=217297541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 217297542 . G . PASS END=217297543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 217297544 . C . PASS END=217297544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:27,0 chr2 217297545 . C . PASS END=217297545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 217297546 . G . PASS END=217297546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr2 217297547 . C . PASS END=217297550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 217297551 . T . PASS END=217297551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 217297552 . G . PASS END=217297553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 217297554 . T . PASS END=217297573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,62,255:26,0 chr2 217297574 . C . PASS END=217297591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:42:18:0,42,630:0,47,255:18,0 chr2 217297599 . G . PASS END=217297599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 217297601 . C . PASS END=217297601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 217300061 . G . PASS END=217300203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:27:0,81,980:0,81,255:40,0 chr2 217300204 . T . PASS END=217300204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:28,0 chr2 217300205 . A . PASS END=217300205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 217300206 . A . PASS END=217300220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:64:27:0,64,909:0,64,255:26,0 chr2 217303143 . G . PASS END=217303205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:82:32:0,82,1100:0,82,255:40,0 chr2 217303206 . A . PASS END=217303206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1200:0,72,255:28,0 chr2 217303207 . A . PASS END=217303208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1305:0,102,255:30,0 chr2 217311385 . C . PASS END=217311441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:48:0,111,1696:0,111,255:40,0 chr2 217311741 . G . PASS END=217311846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:40:0,103,1360:0,103,255:40,0 chr2 217311847 . A . PASS END=217311881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:51:0,120,1798:0,120,255:40,0 chr2 217311886 . G . PASS END=217311886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,102,1530:0,144,255:34,0 chr2 217315569 . A . PASS END=217315569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 217315570 . T . PASS END=217315570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 217315571 . G . PASS END=217315626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:21:0,63,717:0,63,255:26,0 chr2 217315627 . T . PASS END=217315663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:26,0 chr2 217315664 . C T, 50.00 PASS DP=26;MQ=250.00;MQRankSum=4.190;ReadPosRankSum=3.136;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,16,0:0.615,0.000:26:6,8,0:4,8,0:47:85,0,47,535,358,893:255,0,255:9,0:5.0000e+01,8.5683e-05,5.0132e+01,4.5000e+02,3.9243e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,8,10,6:4,6,8,8 chr2 217315665 . G . PASS END=217315676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1000:0,78,255:26,0 chr2 217315677 . C . PASS END=217315677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:24,0 chr2 217315678 . T . PASS END=217315682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:25,0 chr2 217315683 . G . PASS END=217315683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:25,0 chr2 217315684 . C . PASS END=217315693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 217315694 . C . PASS END=217315701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr2 217315702 . T . PASS END=217315705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:27:0,78,1170:0,81,255:26,0 chr2 217315706 . G . PASS END=217315708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 217315709 . T . PASS END=217315733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 217315734 . A . PASS END=217315758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,660:0,54,255:19,0 chr2 217315759 . C . PASS END=217315759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 217315760 . C . PASS END=217315787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,596:0,48,255:17,0 chr2 217329320 . A . PASS END=217329387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,2:60:99:46:0,102,1783:0,102,255:40,0 chr2 217329388 . C . PASS END=217329391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,150,255:40,0 chr2 217332667 . T . PASS END=217332769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:38:0,108,1620:0,114,255:40,0 chr2 217339992 . C . PASS END=217339995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 217339996 . T . PASS END=217340002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 217340003 . C . PASS END=217340036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:18,0 chr2 217340037 . C . PASS END=217340043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:22,0 chr2 217340044 . A . PASS END=217340044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 217340045 . C . PASS END=217340062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 217340063 . A . PASS END=217340063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:21,0 chr2 217340064 . C . PASS END=217340093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,864:0,69,255:24,0 chr2 217340094 . T . PASS END=217340094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 217340095 . C . PASS END=217340104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr2 217340105 . T . PASS END=217340114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,745:0,49,255:19,0 chr2 217340115 . G . PASS END=217340119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 217340120 . C . PASS END=217340162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,613:0,46,255:19,0 chr2 217340163 . T . PASS END=217340175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 217340183 . C . PASS END=217340183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 217341831 . G . PASS END=217341932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:32:0,90,1350:0,95,255:40,0 chr2 217341937 . G . PASS END=217341937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 217341947 . G . PASS END=217341947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 217342922 . A . PASS END=217342922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 217342926 . G . PASS END=217343022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:57:0,120,1800:0,158,255:40,0 chr2 217347461 . G . PASS END=217347470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1072:0,84,255:29,0 chr2 217347471 . A . PASS END=217347471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 217347472 . G . PASS END=217347476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 217347477 . A . PASS END=217347478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 217347479 . A . PASS END=217347679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:35:0,84,1266:0,84,255:40,0 chr2 217347680 . A . PASS END=217347680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:26,0 chr2 217347681 . G . PASS END=217347692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:29:0,81,1215:0,87,255:28,0 chr2 217347693 . C . PASS END=217347697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:25,0 chr2 217347698 . T . PASS END=217347700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:27:0,42,855:0,42,255:19,0 chr2 217347713 . G . PASS END=217347713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 217363598 . A . PASS END=217363600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,103,1382:0,103,255:37,0 chr2 217363993 . G . PASS END=217363993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 217363994 . C . PASS END=217364003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,779:0,63,255:24,0 chr2 217364004 . C . PASS END=217364004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 217364005 . A . PASS END=217364016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,795:0,72,255:24,0 chr2 217364017 . A . PASS END=217364017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 217364018 . T . PASS END=217364027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,870:0,72,255:25,0 chr2 217364028 . A . PASS END=217364036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,988:0,81,255:29,0 chr2 217364037 . C . PASS END=217364037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 217364038 . C . PASS END=217364041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 217364042 . A . PASS END=217364046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:31:0,77,1124:0,77,255:26,0 chr2 217364047 . G . PASS END=217364052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 217364053 . C . PASS END=217364053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,954:0,70,255:28,0 chr2 217364054 . T . PASS END=217364077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1056:0,84,255:29,0 chr2 217364078 . A . PASS END=217364078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 217364079 . A . PASS END=217364082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 217364083 . A . PASS END=217364084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 217364085 . C . PASS END=217364088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 217364089 . C . PASS END=217364100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:24,0 chr2 217364101 . A . PASS END=217364113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:50:19:0,50,737:0,50,255:19,0 chr2 217364114 . G . PASS END=217364117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 217364118 . C . PASS END=217364121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 217364555 . G . PASS END=217364576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:43:0,88,1423:0,88,255:40,0 chr2 217364577 . C . PASS END=217364589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,145,255:40,0 chr2 217364672 . A . PASS END=217364726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,142,255:40,0 chr2 217364727 . C . PASS END=217364754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,149,255:40,0 chr2 217366064 . T . PASS END=217366127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:48:0,120,1800:0,127,255:40,0 chr2 217384055 . G . PASS END=217384113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:43:0,113,1545:0,113,255:40,0 chr2 217385437 . A . PASS END=217385497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,1:72:99:68:0,120,1800:0,181,255:40,0 chr2 217393993 . G . PASS END=217393996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:82:0,120,1800:0,238,255:40,0 chr2 217443644 . C . PASS END=217443656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:68:0,120,1800:0,180,255:40,0 chr2 217498247 . A . LowDepth;LowGQ END=217498251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:0,0:0:0:0:0,0,0:0,0,0:0,0 chr2 217498252 . G . LowGQ END=217498289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:2,0:2:0:1:0,0,0:0,0,31:1,0 chr2 217498290 . C CGCCGCTGCT, 57.00 PASS DP=3;MQ=188.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,3,0:1.000,0.000:3:0,0,0:0,3,0:7:88,9,0,127,9,127:69,0,30:0,2:5.6998e+01,6.9976e+00,9.6750e-01,1.3100e+02,4.1768e+01,1.3400e+02:0.00,29.00,32.00,34.77,63.77,37.77:0,0,1,2:0,0,2,1 chr2 217498291 . G . LowGQ END=217498367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:0:2:0,0,39:0,0,55:3,0 chr2 217498368 . G . LowDepth;LowGQ END=217498457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 217498458 . C . PASS END=217498587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,147:0,12,147:6,0 chr2 217498588 . C . PASS END=217498588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 217498589 . C . PASS END=217498673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,263:0,21,255:9,0 chr2 217498674 . C . PASS END=217498688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,202:0,18,202:6,0 chr2 217524460 . A . PASS END=217524469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,177,255:40,0 chr2 217525280 . A . PASS END=217525285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:21:0,49,745:0,49,255:19,0 chr2 217525286 . G . PASS END=217525286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 217525287 . C . PASS END=217525287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 217525288 . G . PASS END=217525303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:24,0 chr2 217525304 . G . PASS END=217525304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 217525305 . A . PASS END=217525311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,908:0,61,255:23,0 chr2 217525312 . G . PASS END=217525317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:27,0 chr2 217525318 . A . PASS END=217525318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,810:0,64,255:26,0 chr2 217525319 . A . PASS END=217525377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:27:0,81,958:0,81,255:39,0 chr2 217525378 . C . PASS END=217525378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr2 217525379 . T . PASS END=217525403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:34:0,88,1235:0,88,255:34,0 chr2 217525404 . C . PASS END=217525404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:33,0 chr2 217525405 . G . PASS END=217525414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 217525415 . A . PASS END=217525415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:32,0 chr2 217525416 . G . PASS END=217525473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1136:0,80,255:34,0 chr2 217525474 . G . PASS END=217525484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1125:0,90,255:26,0 chr2 217525485 . G . PASS END=217525489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 217525490 . T . PASS END=217525505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 217525506 . C . PASS END=217525509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:23:0,54,810:0,69,255:19,0 chr2 217526495 . C . PASS END=217526498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:23,0 chr2 217526499 . T . PASS END=217526499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 217526500 . T . PASS END=217526507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,801:0,69,255:24,0 chr2 217526508 . A . PASS END=217526508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 217526509 . G . PASS END=217526515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 217526516 . T . PASS END=217526516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 217526517 . C . PASS END=217526527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:31,0 chr2 217526528 . T . PASS END=217526528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1064:0,54,255:30,0 chr2 217526529 . T . PASS END=217526537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 217526538 . T . PASS END=217526538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1188:0,68,255:29,0 chr2 217526539 . G . PASS END=217526542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr2 217526543 . T . PASS END=217526543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:29,0 chr2 217526544 . C . PASS END=217526545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 217526546 . T . PASS END=217526546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:29,0 chr2 217526547 . C . PASS END=217526692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,1081:0,80,255:40,0 chr2 217526693 . A . PASS END=217526716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:63:22:0,63,831:0,65,255:25,0 chr2 217526717 . A . PASS END=217526717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,758:0,50,255:20,0 chr2 217526718 . A . PASS END=217526721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 217528663 . T . PASS END=217528663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 217528664 . G . PASS END=217528664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 217528665 . C . PASS END=217528697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,513:0,48,255:19,0 chr2 217528698 . C . PASS END=217528699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 217528700 . G . PASS END=217528700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 217528701 . G . PASS END=217528707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,776:0,63,255:21,0 chr2 217528708 . A . PASS END=217528709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 217528710 . C . PASS END=217528712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 217528713 . C . PASS END=217528713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 217528714 . A . PASS END=217528714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 217528715 . A . PASS END=217528715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 217528716 . C . PASS END=217528716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 217528717 . A . PASS END=217528717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 217528718 . C . PASS END=217528750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,847:0,66,255:23,0 chr2 217528751 . G . PASS END=217528755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,713:0,47,255:19,0 chr2 217528756 . G . PASS END=217528760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 217528761 . C . PASS END=217528761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 217528762 . G . PASS END=217528763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 217528764 . G . PASS END=217528767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 217528768 . C . PASS END=217528770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 217528771 . C . PASS END=217528792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,584:0,51,255:17,0 chr2 217528793 . A . PASS END=217528795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 217528796 . C . PASS END=217528801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 217528802 . G . PASS END=217528809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 217528810 . A . PASS END=217528810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 217528811 . C . PASS END=217528814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:10,0 chr2 217528815 . G . PASS END=217528825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 217528826 . A . PASS END=217528826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr2 217528827 . G . PASS END=217528827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 217541474 . T . PASS END=217541474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,809:0,48,255:23,0 chr2 217541475 . C . PASS END=217541475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 217541476 . A . PASS END=217541487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:30:0,83,1170:0,83,255:33,0 chr2 217541488 . T . PASS END=217541488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:32,0 chr2 217541489 . G . PASS END=217541511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1138:0,83,255:34,0 chr2 217541512 . A . PASS END=217541544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:89:34:0,89,1243:0,89,255:40,0 chr2 217541545 . T . PASS END=217541572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:32:0,82,1141:0,82,255:33,0 chr2 217541573 . G . PASS END=217541573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1169:0,66,255:27,0 chr2 217541574 . A . PASS END=217541574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 217541575 . T . PASS END=217541576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:31:0,63,1086:0,63,255:28,0 chr2 217541577 . C . PASS END=217541578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1305:0,93,255:30,0 chr2 217541579 . A . PASS END=217541579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 217541580 . C . PASS END=217541581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 217541582 . T C, 140.29 PASS DP=31;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,18,0:0,13,0:90:178,93,0,1184,93,1184:255,93,0:0,0:1.4029e+02,9.0295e+01,0.0000e+00,4.5000e+02,1.2506e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,18:0,0,14,17 chr2 217541583 . T . PASS END=217541584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1124:0,87,255:30,0 chr2 217541585 . G . PASS END=217541585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:29,0 chr2 217541586 . C . PASS END=217541587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 217541588 . G . PASS END=217541588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 217541589 . C . PASS END=217541596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 217541597 . A . PASS END=217541597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 217541598 . G . PASS END=217541600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 217541601 . T . PASS END=217541605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:24,0 chr2 217542835 . C . PASS END=217542836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,860:0,69,255:23,0 chr2 217542837 . G . PASS END=217542837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 217542838 . C . PASS END=217542951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,796:0,62,255:26,0 chr2 217542952 . G . PASS END=217542952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 217542953 . C . PASS END=217542954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 217543573 . C . PASS END=217543578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:17:0,44,675:0,44,255:18,0 chr2 217543579 . A . PASS END=217543584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:44:20:0,44,698:0,44,255:19,0 chr2 217543585 . C . PASS END=217543585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:16,0 chr2 217543586 . T . PASS END=217543600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,660:0,44,255:21,0 chr2 217543601 . G . PASS END=217543602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 217543603 . A . PASS END=217543603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:21,0 chr2 217543604 . G . PASS END=217543606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 217543607 . A . PASS END=217543607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:21,0 chr2 217543608 . T . PASS END=217543616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:26,0 chr2 217543617 . G . PASS END=217543625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1166:0,87,255:33,0 chr2 217543626 . T . PASS END=217543626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:30,0 chr2 217543627 . G . PASS END=217543799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:81:29:0,81,983:0,87,255:40,0 chr2 217543800 . T . PASS END=217543800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,934:0,56,255:28,0 chr2 217543801 . C . PASS END=217543812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1070:0,87,255:29,0 chr2 217543813 . A . PASS END=217543855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,68,255:26,0 chr2 217543856 . C . PASS END=217543856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 217543857 . A . PASS END=217543857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 217543858 . G . PASS END=217543895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:18,0 chr2 217543896 . A . PASS END=217543896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 217543897 . A . PASS END=217543936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,629:0,48,255:18,0 chr2 217543937 . C . PASS END=217543937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 217559162 . C . PASS END=217559162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 217559163 . G . PASS END=217559173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,525:0,42,255:18,0 chr2 217559174 . G . PASS END=217559174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 217559175 . C . PASS END=217559181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 217559182 . T . PASS END=217559182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 217559183 . A . PASS END=217559197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,554:0,40,255:19,0 chr2 217559198 . G . PASS END=217559199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 217559200 . C . PASS END=217559210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,59,255:19,0 chr2 217559211 . G . PASS END=217559211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 217559212 . C . PASS END=217559212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 217559213 . C . PASS END=217559225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 217559226 . G . PASS END=217559232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 217559233 . G . PASS END=217559242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,602:0,60,255:20,0 chr2 217559243 . C . PASS END=217559245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 217559246 . C . PASS END=217559296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,62,255:26,0 chr2 217559297 . C . PASS END=217559303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 217559304 . C . PASS END=217559317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,937:0,65,255:26,0 chr2 217559318 . G . PASS END=217559324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1102:0,87,255:29,0 chr2 217559325 . G . PASS END=217559325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 217559326 . G . PASS END=217559427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1030:0,80,255:34,0 chr2 217559428 . A . PASS END=217559428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:25,0 chr2 217559429 . A . PASS END=217559430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:27,0 chr2 217559431 . G . PASS END=217559484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,807:0,66,255:26,0 chr2 217559485 . G . PASS END=217559498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:18,0 chr2 217724390 . T . PASS END=217724418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:31:0,89,1149:0,89,255:36,0 chr2 217724619 . C . PASS END=217724757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:97:44:0,97,1575:0,97,255:40,0 chr2 218568676 . T . PASS END=218568692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:31,0 chr2 218568693 . A . PASS END=218568693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 218568694 . C . PASS END=218568735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:31:0,93,1202:0,93,255:35,0 chr2 218568736 . T . PASS END=218568736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1095:0,72,255:31,0 chr2 218568737 . T . PASS END=218568751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:32,0 chr2 218568752 . A . PASS END=218568754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 218568755 . A . PASS END=218568760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 218568761 . G . PASS END=218568762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 218568763 . T . PASS END=218568764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 218568765 . C . PASS END=218568765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:26,0 chr2 218568766 . C . PASS END=218568768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 218568769 . G . PASS END=218568776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 218568777 . A . PASS END=218568777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,868:0,26,255:22,0 chr2 218568778 . T . PASS END=218568785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,953:0,65,255:24,0 chr2 218568786 . C . PASS END=218568786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 218568787 . C . PASS END=218568790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 218568791 . C . PASS END=218568791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 218568792 . C . PASS END=218568797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 218577752 . C . PASS END=218577824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:98:40:0,98,1460:0,98,255:40,0 chr2 218604210 . C . PASS END=218604246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1161:0,80,255:32,0 chr2 218604247 . A C, 155.34 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,25,0:0,11,0:105:193,108,0,1377,108,1377:255,108,0:0,0:1.5534e+02,1.0534e+02,0.0000e+00,4.5000e+02,1.4011e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,21,15:0,0,24,12 chr2 218604248 . A . PASS END=218604260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1208:0,83,255:31,0 chr2 218604261 . C . PASS END=218604261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:26,0 chr2 218604262 . T . PASS END=218604265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 218604266 . G . PASS END=218604266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:26,0 chr2 218604267 . A . PASS END=218604268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 218604269 . T . PASS END=218604269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 218604270 . A . PASS END=218604275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 218604276 . A . PASS END=218604285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1061:0,71,255:26,0 chr2 218604286 . T . PASS END=218604286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:22,0 chr2 218604287 . C . PASS END=218604298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,67,255:24,0 chr2 218620744 . C . PASS END=218620855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:83:28:0,83,980:0,83,255:40,0 chr2 218669182 . T . PASS END=218669197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,684:0,57,255:19,0 chr2 218669198 . G . PASS END=218669210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,837:0,66,255:25,0 chr2 218669211 . C . PASS END=218669224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,956:0,81,255:27,0 chr2 218669225 . T . PASS END=218669228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 218669229 . C . PASS END=218669230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218669231 . A . PASS END=218669238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 218669239 . G . PASS END=218669241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218669242 . C . PASS END=218669242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 218669243 . G . PASS END=218669271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1080:0,87,255:32,0 chr2 218669272 . G . PASS END=218669272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:27,0 chr2 218669273 . T . PASS END=218669274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 218669275 . G . PASS END=218669311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,815:0,66,255:26,0 chr2 218669312 . A . PASS END=218669326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 218672798 . T . PASS END=218672810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,101,1380:0,101,255:40,0 chr2 218672811 . C . PASS END=218672830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,107,1488:0,107,255:40,0 chr2 218673326 . T . PASS END=218673394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,127,255:40,0 chr2 218674546 . T . PASS END=218674547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 218674548 . T . PASS END=218674548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:28,0 chr2 218674549 . C . PASS END=218674659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:91:31:0,91,1149:0,91,255:40,0 chr2 218674660 . T . PASS END=218674681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1305:0,105,255:35,0 chr2 218674682 . T . PASS END=218674696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,74,255:26,0 chr2 218674697 . C T, 46.01 PASS DP=27;MQ=250.00;MQRankSum=4.243;ReadPosRankSum=2.636;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,10,0:0.370,0.000:27:7,5,0:10,5,0:45:81,0,50,357,608,965:255,0,255:13,0:4.6012e+01,1.3047e-04,5.3000e+01,3.5732e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,4,6:7,10,5,5 chr2 218674698 . G . PASS END=218674700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:21,0 chr2 218674701 . G . PASS END=218674703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 218674704 . C . PASS END=218674704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 218674705 . A . PASS END=218674714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,767:0,50,255:19,0 chr2 218674971 . C . PASS END=218674973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218674974 . C . PASS END=218674974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:27,0 chr2 218674975 . C . PASS END=218674978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 218674979 . T . PASS END=218674981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 218674982 . T . PASS END=218674987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 218674988 . A . PASS END=218674988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 218674989 . G . PASS END=218674989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 218674990 . G . PASS END=218674991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:27,0 chr2 218674992 . C . PASS END=218674993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218674994 . G . PASS END=218674995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 218674996 . A . PASS END=218674998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218674999 . T . PASS END=218674999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1031:0,49,255:28,0 chr2 218675000 . G . PASS END=218675002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 218675003 . T . PASS END=218675003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:26,0 chr2 218675004 . T . PASS END=218675006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 218675007 . C . PASS END=218675007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 218675008 . A . PASS END=218675013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1086:0,84,255:30,0 chr2 218675014 . G . PASS END=218675014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 218675015 . G . PASS END=218675021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 218675022 . C . PASS END=218675036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,74,255:26,0 chr2 218675037 . T . PASS END=218675037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:23,0 chr2 218675038 . G . PASS END=218675041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:24,0 chr2 218675042 . T . PASS END=218675042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:22,0 chr2 218677091 . C . PASS END=218677168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:39:0,102,1466:0,113,255:40,0 chr2 218677938 . C . PASS END=218677944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:26,0 chr2 218677945 . T . PASS END=218677949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:28,0 chr2 218677950 . C . PASS END=218677950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 218677951 . A . PASS END=218677954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:30,0 chr2 218677955 . G . PASS END=218677955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 218677956 . G . PASS END=218677958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 218677959 . A . PASS END=218677959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 218677960 . G . PASS END=218678030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:32:0,90,1166:0,95,255:39,0 chr2 218678408 . C . PASS END=218678431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:24,0 chr2 218678432 . T . PASS END=218678432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,611:0,38,255:22,0 chr2 218678433 . T . PASS END=218678450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,824:0,72,255:24,0 chr2 218678451 . C . PASS END=218678451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr2 218678452 . T . PASS END=218678478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:25,0 chr2 218678479 . A . PASS END=218678479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 218678480 . A . PASS END=218678498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:22,0 chr2 218678499 . G . PASS END=218678517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:17:0,47,720:0,47,255:19,0 chr2 218678518 . T . PASS END=218678534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:11:0,30,450:0,33,255:11,0 chr2 218678535 . G . PASS END=218678539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 218679635 . C . PASS END=218679721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:32:0,90,1350:0,91,255:40,0 chr2 218682413 . C . PASS END=218682417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr2 218682418 . A . PASS END=218682418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 218682419 . T . PASS END=218682435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,845:0,69,255:25,0 chr2 218682436 . T . PASS END=218682436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 218682437 . C . PASS END=218682444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,931:0,62,255:26,0 chr2 218682445 . G . PASS END=218682481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1133:0,80,255:30,0 chr2 218682482 . T . PASS END=218682482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:26,0 chr2 218682483 . G . PASS END=218682524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1072:0,90,255:31,0 chr2 218682525 . G . PASS END=218682525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 218682526 . G . PASS END=218682529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 218682530 . C . PASS END=218682543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:27:0,72,1080:0,81,255:26,0 chr2 218682544 . C . PASS END=218682548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218682549 . T . PASS END=218682616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,880:0,67,255:26,0 chr2 218682617 . C . PASS END=218682617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218682618 . T . PASS END=218682641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,976:0,65,255:26,0 chr2 218682642 . G . PASS END=218682644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:23,0 chr2 218682645 . A . PASS END=218682646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,906:0,39,255:23,0 chr2 218682647 . G . PASS END=218682647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 218682648 . G . PASS END=218682648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 218682649 . C . PASS END=218682654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 218682655 . A . PASS END=218682656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:33:24:0,33,845:0,33,255:24,0 chr2 218682657 . G . PASS END=218682666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:26,0 chr2 218682667 . T . PASS END=218682680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1056:0,84,255:29,0 chr2 218682681 . A . PASS END=218682681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 218682682 . G . PASS END=218682684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:31,0 chr2 218682685 . A . PASS END=218682685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:30,0 chr2 218682686 . A . PASS END=218682815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1202:0,81,255:39,0 chr2 218682816 . A . PASS END=218682816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1418:0,79,255:31,0 chr2 218682817 . G . PASS END=218682845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1155:0,90,255:33,0 chr2 218682846 . G . PASS END=218682867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,837:0,65,255:26,0 chr2 218682868 . A . PASS END=218682868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:19,0 chr2 218682869 . T . PASS END=218682886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,679:0,63,255:22,0 chr2 218682887 . C . PASS END=218682887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 218682888 . G . PASS END=218682894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 218682895 . A . PASS END=218682895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 218682896 . G . PASS END=218682897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 218682898 . T . PASS END=218682912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:19,0 chr2 218682913 . C . PASS END=218682918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 218682919 . T . PASS END=218682954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,643:0,40,255:19,0 chr2 218682955 . A . PASS END=218682958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,656:0,63,255:21,0 chr2 218682959 . T . PASS END=218682959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 218682960 . G . PASS END=218682960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218682961 . T . PASS END=218682961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 218682962 . T . PASS END=218682965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218682966 . G . PASS END=218682973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 218682974 . A . PASS END=218682975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218682976 . A . PASS END=218682976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,709:0,27,255:20,0 chr2 218682977 . C . PASS END=218682982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,739:0,63,255:23,0 chr2 218682983 . A . PASS END=218682983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 218682984 . G . PASS END=218683014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 218683015 . C . PASS END=218683015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 218683016 . T . PASS END=218683021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 218683022 . G . PASS END=218683022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 218683023 . G . PASS END=218683036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,847:0,69,255:23,0 chr2 218683037 . T . PASS END=218683037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:18,0 chr2 218683038 . G . PASS END=218683056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 218683057 . G . PASS END=218683061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 218683062 . A . PASS END=218683064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 218683065 . A . PASS END=218683067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 218683068 . G . PASS END=218683078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 218683079 . C . PASS END=218683089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:29,0 chr2 218683090 . A . PASS END=218683090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 218683091 . T . PASS END=218683109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr2 218683110 . A . PASS END=218683113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1039:0,71,255:26,0 chr2 218683114 . G . PASS END=218683114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr2 218683115 . G . PASS END=218683115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 218683116 . A . PASS END=218683116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 218683117 . C . PASS END=218683121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 218683122 . G . PASS END=218683128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 218683129 . G . PASS END=218683152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1125:0,80,255:32,0 chr2 218683153 . C . PASS END=218683153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,1 chr2 218683154 . A G, 50.00 PASS DP=32;MQ=250.00;MQRankSum=4.796;ReadPosRankSum=4.267;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,17,0:0.531,0.000:32:7,9,0:8,8,0:48:85,0,50,608,536,1145:255,0,255:14,1:5.0000e+01,6.6527e-05,5.2731e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,6,10,7:9,6,10,7 chr2 218683155 . G . PASS END=218683155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:30,0 chr2 218683156 . C . PASS END=218683167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:32:0,86,1217:0,86,255:32,0 chr2 218683168 . C . PASS END=218683168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1142:0,63,255:31,0 chr2 218683169 . T . PASS END=218683191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:33,0 chr2 218683192 . G . PASS END=218683322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1227:0,88,255:38,0 chr2 218683323 . C . PASS END=218683323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr2 218683324 . A . PASS END=218683344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1134:0,85,255:34,0 chr2 218683345 . C . PASS END=218683368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,1035:0,60,255:26,0 chr2 218683369 . G . PASS END=218683373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 218683374 . G . PASS END=218683420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,953:0,65,255:26,0 chr2 218683421 . G . PASS END=218683423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218683424 . T . PASS END=218683425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 218683426 . G . PASS END=218683429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 218683430 . T . PASS END=218683432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 218683433 . G . PASS END=218683434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 218683435 . G . PASS END=218683452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:25,0 chr2 218683453 . T . PASS END=218683453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr2 218683454 . C . PASS END=218683471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 218683472 . C . PASS END=218683482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:17,0 chr2 218686463 . C . PASS END=218686463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 218686464 . T . PASS END=218686512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:13,0 chr2 218686513 . A . PASS END=218686513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 218686514 . A . PASS END=218686546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 218686547 . A . PASS END=218686547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 218686548 . T . PASS END=218686551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 218686552 . A . LowGQ END=218686552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,3:15:0:15:0,0,355:5,0,255:10,0 chr2 218686553 . T . PASS END=218686638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,374:0,33,255:13,0 chr2 218686639 . A . PASS END=218686661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:20:8:0,20,310:0,20,255:9,0 chr2 218691167 . T . PASS END=218691186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,591:0,51,255:19,0 chr2 218691187 . G . PASS END=218691188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 218691189 . T . PASS END=218691195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 218691196 . T . PASS END=218691209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,746:0,63,255:22,0 chr2 218691210 . A . PASS END=218691210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 218691211 . T . PASS END=218691296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,847:0,65,255:25,0 chr2 218691297 . C . PASS END=218691297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 218691298 . C . PASS END=218691367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr2 218691368 . T . PASS END=218691368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,796:0,53,255:20,0 chr2 218691369 . C . PASS END=218691369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 218691370 . A . PASS END=218691370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr2 218691371 . C . PASS END=218691373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 218691374 . G . PASS END=218691374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:20,0 chr2 218691375 . C . PASS END=218691397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:23,0 chr2 218691398 . T . PASS END=218691398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 218691399 . C . PASS END=218691408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 218691409 . A . PASS END=218691409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:21,0 chr2 218691410 . A . PASS END=218691458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,760:0,63,255:23,0 chr2 218691459 . G . PASS END=218691460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 218691461 . G . PASS END=218691467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 218691468 . A . PASS END=218691471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 218691472 . G . PASS END=218691536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:23,0 chr2 218691537 . A . PASS END=218691537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:21,0 chr2 218691538 . G . PASS END=218691539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 218691540 . A . PASS END=218691541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 218691542 . C . PASS END=218691542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:20,0 chr2 218691543 . T . PASS END=218691545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 218691546 . A . PASS END=218691546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,938:0,47,255:21,0 chr2 218691547 . G . PASS END=218691555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,990:0,65,255:24,0 chr2 218691556 . G . PASS END=218691556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 218691557 . A . PASS END=218691568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:23,0 chr2 218691569 . C . PASS END=218691588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,635:0,40,255:19,0 chr2 218691589 . C . PASS END=218691589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218691590 . C . PASS END=218691590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 218691591 . T . PASS END=218691609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,922:0,66,255:24,0 chr2 218691610 . C . PASS END=218691610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr2 218691611 . A . PASS END=218691619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:25,0 chr2 218691620 . C . PASS END=218691620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 218691621 . T . PASS END=218691621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 218691622 . C . PASS END=218691652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr2 218691653 . G . PASS END=218691656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 218691657 . A . PASS END=218691662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:22,0 chr2 218691663 . C . PASS END=218691663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 218691664 . C . PASS END=218691667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:23,0 chr2 218691668 . C . PASS END=218691668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 218691669 . T . PASS END=218691669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 218691670 . A . PASS END=218691670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 218691671 . A . PASS END=218691678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,823:0,69,255:25,0 chr2 218691679 . A . PASS END=218691680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:24,0 chr2 218691681 . A . PASS END=218691731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,897:0,62,255:25,0 chr2 218691732 . T . PASS END=218691755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,637:0,53,255:19,0 chr2 218691756 . A . PASS END=218691756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 218691757 . A . PASS END=218691776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,568:0,48,255:18,0 chr2 218691777 . A . PASS END=218691777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 218691778 . T . PASS END=218691778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 218691779 . G . PASS END=218691790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:15:0,34,540:0,34,255:13,0 chr2 218691791 . C . PASS END=218691791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 218691792 . A . PASS END=218691797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 218691798 . C . PASS END=218691798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 218691799 . A . PASS END=218691800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 218694567 . C . PASS END=218694653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:65:0,120,1800:0,156,255:40,0 chr2 218694654 . A . PASS END=218694690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,3:90:99:82:0,120,1800:0,220,255:40,0 chr2 218694691 . A G, 50.00 PASS DP=82;MQ=249.82;MQRankSum=7.753;ReadPosRankSum=3.056;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:37,45,0:0.549,0.000:82:20,25,0:17,20,0:48:85,0,49,1557,1262,2819:255,0,255:34,0:5.0000e+01,6.9634e-05,5.2182e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,17,24,21:21,16,20,25 chr2 218694692 . A . PASS END=218694728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:68:0,120,1800:0,163,255:40,0 chr2 218694729 . A . PASS END=218694737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,1:68:99:66:0,120,1800:0,149,255:40,0 chr2 218695090 . C . PASS END=218695091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 218695092 . G . PASS END=218695092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,893:0,42,255:24,0 chr2 218695093 . G . PASS END=218695093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 218695094 . C . PASS END=218695094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 218695095 . T . PASS END=218695095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 218695096 . G . PASS END=218695096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 218695097 . G . PASS END=218695097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 218695098 . A . PASS END=218695099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 218695100 . C . PASS END=218695101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 218695102 . G A, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=2.955;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:4,3,0:7,10,0:48:85,0,50,465,385,850:255,0,255:9,0:5.0000e+01,6.7045e-05,5.2640e+01,4.5000e+02,4.2011e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,6,7:4,7,6,7 chr2 218695103 . T . PASS END=218695111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 218695112 . A . PASS END=218695112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,699:0,35,255:21,0 chr2 218695113 . A . PASS END=218695113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 218696178 . C . PASS END=218696181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:32,0 chr2 218696182 . T . PASS END=218696182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:30,0 chr2 218696183 . G A, 34.98 PASS DP=32;MQ=250.00;MQRankSum=4.317;ReadPosRankSum=0.210;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,9,0:0.281,0.000:32:11,5,0:12,4,0:35:70,0,50,256,815,1071:148,0,255:22,0:3.4976e+01,1.4030e-03,5.3001e+01,2.5619e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,6,3:9,14,4,5 chr2 218696184 . T . PASS END=218696184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1070:0,63,255:29,0 chr2 218696185 . G . PASS END=218696193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:88:32:0,88,1227:0,88,255:34,0 chr2 218696194 . C . PASS END=218696194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1263:0,75,255:33,0 chr2 218696195 . A . PASS END=218696220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1258:0,91,255:36,0 chr2 218696221 . C . PASS END=218696256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1194:0,83,255:36,0 chr2 218696257 . C . PASS END=218696257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 218696258 . G . PASS END=218696260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 218696261 . G . PASS END=218696270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,74,255:25,0 chr2 218699814 . C . PASS END=218699818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,682:0,54,255:19,0 chr2 218699819 . C . PASS END=218699864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,729:0,60,255:23,0 chr2 218699865 . C . PASS END=218699867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 218699868 . C . PASS END=218699878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:22:0,61,845:0,61,255:22,0 chr2 218699879 . T . PASS END=218699879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 218699880 . G . PASS END=218699886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 218699887 . G . PASS END=218699889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 218700738 . C . PASS END=218700739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 218700740 . C . PASS END=218700740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 218700741 . T . PASS END=218700741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 218700742 . T . PASS END=218700743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 218700744 . G . PASS END=218700765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1028:0,87,255:31,0 chr2 218700766 . G . PASS END=218700766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 218700767 . C . PASS END=218700829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1135:0,80,255:35,0 chr2 218700830 . G . PASS END=218700830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:31,0 chr2 218700831 . G . PASS END=218700832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1202:0,93,255:31,0 chr2 218700833 . A . PASS END=218700833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 218700834 . T . PASS END=218700847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 218700848 . A . PASS END=218700848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1074:0,57,255:30,0 chr2 218700849 . C . PASS END=218700858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1127:0,80,255:31,0 chr2 218700859 . T . PASS END=218700874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr2 218700875 . C . PASS END=218700879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218700880 . C . PASS END=218700915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,69,255:26,0 chr2 218700916 . T . PASS END=218700934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,765:0,50,255:19,0 chr2 218705922 . C . PASS END=218705922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 218705923 . A . PASS END=218705923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:18:30:0,18,951:0,18,255:27,0 chr2 218705924 . G . PASS END=218705924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 218705925 . A . PASS END=218705925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,943:0,40,255:27,0 chr2 218705926 . G . PASS END=218705926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 218705927 . A . PASS END=218705927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:5:31:0,5,874:0,5,255:27,0 chr2 218705928 . G . PASS END=218705928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:30,0 chr2 218705929 . G . PASS END=218705929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 218705930 . G . PASS END=218705930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:44:31:0,44,1028:0,44,255:28,0 chr2 218705931 . A . PASS END=218705932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 218705933 . G . PASS END=218705933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1033:0,46,255:29,0 chr2 218705934 . A . PASS END=218705935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 218705936 . G . PASS END=218705936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,1014:0,43,255:28,0 chr2 218705937 . A . PASS END=218705937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,992:0,38,255:29,0 chr2 218705938 . T . PASS END=218705938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 218705939 . T . PASS END=218705939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:30,0 chr2 218705940 . G . PASS END=218705940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 218705941 . G . PASS END=218705941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:30,0 chr2 218705942 . A . PASS END=218705943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1113:0,93,255:31,0 chr2 218705944 . C . PASS END=218705945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1039:0,60,255:29,0 chr2 218705946 . G . PASS END=218705946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 218705947 . G . PASS END=218705947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 218705948 . T C, 121.78 PASS DP=27;MQ=241.13;FractionInformativeReads=0.926 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,12,0:0,13,0:72:160,75,0,940,75,940:255,93,0:0,0:1.2178e+02,7.1782e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,2:0,0,14,11 chr2 218705949 . G . PASS END=218705950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1172:0,85,255:33,0 chr2 218705951 . A . PASS END=218705951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1039:0,52,255:30,0 chr2 218705952 . G . PASS END=218705952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1180:0,85,255:32,0 chr2 218705953 . A . PASS END=218705953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,5:34:19:34:0,19,906:0,19,255:27,0 chr2 218705954 . G . PASS END=218705955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:34,0 chr2 218705956 . A . PASS END=218705956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1039:0,39,255:30,0 chr2 218705957 . G . PASS END=218705975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,104,255:34,0 chr2 218705976 . T . PASS END=218705976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:29,0 chr2 218705977 . G . PASS END=218705986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:32,0 chr2 218705987 . C T, 127.79 PASS DP=27;MQ=244.75;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,11,0:0,16,0:78:166,81,0,984,81,984:255,102,0:0,0:1.2779e+02,7.7787e+01,0.0000e+00,4.5000e+02,1.1256e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,10:0,0,19,8 chr2 218705988 . C . PASS END=218705996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1157:0,82,255:30,0 chr2 218705997 . T . PASS END=218706002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:31:0,60,900:0,93,255:23,0 chr2 218706003 . T . PASS END=218706008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:51:25:0,51,765:0,75,255:18,0 chr2 218706775 . C . PASS END=218706802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:49:0,120,1800:0,137,255:40,0 chr2 218712233 . C . PASS END=218712256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,706:0,57,255:19,0 chr2 218712257 . C . PASS END=218712262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr2 218712263 . A . PASS END=218712263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 218712264 . A . PASS END=218712268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 218712269 . A . PASS END=218712286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,701:0,60,255:23,0 chr2 218712287 . T . PASS END=218712287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:22,0 chr2 218712288 . C . PASS END=218712295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,856:0,72,255:24,0 chr2 218712296 . G . PASS END=218712302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 218712303 . A . PASS END=218712303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 218712304 . G . PASS END=218712305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 218712306 . C T, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,13,0:0,14,0:78:166,81,0,1047,81,1047:255,81,0:0,0:1.2826e+02,7.8263e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,9:0,0,14,13 chr2 218712307 . G . PASS END=218712312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 218712313 . T . PASS END=218712314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,869:0,64,255:26,0 chr2 218712315 . T . PASS END=218712319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 218712320 . A . PASS END=218712320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 218712321 . G . PASS END=218712329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 218712330 . C . PASS END=218712331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 218712332 . G . PASS END=218712333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 218712334 . G . PASS END=218712334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 218712335 . C . PASS END=218712337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 218712338 . T . PASS END=218712343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:29:0,72,1078:0,74,255:25,0 chr2 218712344 . C . PASS END=218712352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:26:0,67,978:0,67,255:25,0 chr2 218712353 . A . PASS END=218712353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,801:0,36,255:22,0 chr2 218712354 . G . PASS END=218712381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,833:0,61,255:26,0 chr2 218712382 . C . PASS END=218712382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 218712383 . T . PASS END=218712389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 218712390 . G . PASS END=218712390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 218712391 . G . PASS END=218712407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,901:0,62,255:26,0 chr2 218712408 . C . PASS END=218712408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 218712409 . A . PASS END=218712420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,914:0,62,255:25,0 chr2 218712421 . G . PASS END=218712421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,841:0,51,255:23,0 chr2 218712422 . C . PASS END=218712426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,945:0,65,255:25,0 chr2 218712427 . C . PASS END=218712427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,897:0,45,255:24,0 chr2 218712428 . T . PASS END=218712432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,917:0,68,255:27,0 chr2 218712433 . G . PASS END=218712433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218712434 . A . PASS END=218712443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1016:0,71,255:26,0 chr2 218712444 . C . PASS END=218712445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 218712446 . G . PASS END=218712446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:28,0 chr2 218712447 . G . PASS END=218712448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 218712449 . T . PASS END=218712449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 218712450 . A . PASS END=218712451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:29,0 chr2 218712452 . G . PASS END=218712453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 218712454 . C . PASS END=218712454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218712455 . C . PASS END=218712455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 218712456 . A . PASS END=218712465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 218712466 . G . PASS END=218712466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 218712467 . G . PASS END=218712471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 218712472 . T . PASS END=218712486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:23:0,68,825:0,68,255:23,0 chr2 218712487 . T . PASS END=218712487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 218712488 . A . PASS END=218712489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 218712490 . G . PASS END=218712490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 218712491 . A . PASS END=218712491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,698:0,14,255:20,0 chr2 218712492 . C . PASS END=218712496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 218712497 . C . PASS END=218712497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:20,0 chr2 218712498 . A . PASS END=218712498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 218712499 . G . PASS END=218712502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr2 218712503 . G . PASS END=218712503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 218712504 . G . PASS END=218712504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:19,0 chr2 218712505 . A . PASS END=218712505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 218712506 . C . PASS END=218712526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:18:0,41,659:0,41,255:18,0 chr2 218712527 . G . PASS END=218712528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 218712529 . G . PASS END=218712549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,645:0,43,255:18,0 chr2 218712550 . G . PASS END=218712550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 218712551 . A . PASS END=218712557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,645:0,54,255:18,0 chr2 218712558 . A . PASS END=218712558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 218712559 . C . PASS END=218712568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:16,0 chr2 218712569 . A . PASS END=218712569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 218712570 . G . PASS END=218712570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 218712571 . C . PASS END=218712573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 218712574 . G . PASS END=218712596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 218712597 . G . PASS END=218712605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 218712606 . G A, 92.15 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,5,0:0,10,0:42:130,45,0,580,45,580:255,45,0:0,0:9.2146e+01,4.2146e+01,2.6508e-04,4.5000e+02,7.6916e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,10:0,0,9,6 chr2 218712607 . G . PASS END=218712620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 218712621 . G . PASS END=218712621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 218712622 . G . PASS END=218712628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:15,0 chr2 218712629 . A . PASS END=218712630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 218712631 . G . PASS END=218712643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:17,0 chr2 218712644 . C . PASS END=218712656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:18,0 chr2 218712657 . C . PASS END=218712657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 218712658 . C . PASS END=218712658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 218712659 . C . PASS END=218712659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 218712660 . G . PASS END=218712673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:17,0 chr2 218712674 . A . PASS END=218712674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 218712675 . C . PASS END=218712688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:18:0,40,631:0,40,255:18,0 chr2 218712689 . C . PASS END=218712710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 218712711 . G . PASS END=218712716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr2 218712717 . C . PASS END=218712717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 218712718 . A . PASS END=218712720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,814:0,63,255:21,0 chr2 218712721 . A . PASS END=218712722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 218712723 . C . PASS END=218712725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 218712726 . A G, 112.75 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,10,0:0,12,0:63:151,66,0,808,66,808:255,66,0:0,0:1.1275e+02,6.2752e+01,2.3297e-06,4.5000e+02,9.7522e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,9:0,0,13,9 chr2 218712727 . T . PASS END=218712727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,783:0,66,255:22,0 chr2 218712728 . T . PASS END=218712728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 218712729 . G . PASS END=218712735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:22,0 chr2 218712736 . T . PASS END=218712737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 218712738 . G . PASS END=218712742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 218712743 . A . PASS END=218712743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 218712744 . C . PASS END=218712756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,840:0,61,255:24,0 chr2 218712757 . T . PASS END=218712757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 218712758 . G . PASS END=218712758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,898:0,72,255:24,0 chr2 218712759 . C . PASS END=218712759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 218712760 . T . PASS END=218712763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 218712764 . A . PASS END=218712771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 218712772 . C . PASS END=218712772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 218712773 . G . PASS END=218712773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 218712774 . C . PASS END=218712782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 218712783 . A . PASS END=218712783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,664:0,38,255:17,0 chr2 218712784 . G . PASS END=218712793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,668:0,43,255:19,0 chr2 218712794 . G . PASS END=218712797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 218712798 . G . PASS END=218712798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 218712799 . G . PASS END=218712799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218712800 . G . PASS END=218712807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 218712808 . G . PASS END=218712811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 218712812 . A . PASS END=218712814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 218712815 . G . PASS END=218712816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218712817 . T . PASS END=218712820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 218712821 . G . PASS END=218712831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:22,0 chr2 218712832 . C . PASS END=218712832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 218712833 . T . PASS END=218712833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 218712834 . G . PASS END=218712845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 218712846 . C . PASS END=218712848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218712849 . C . PASS END=218712849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 218712850 . A . PASS END=218712850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 218712851 . A . PASS END=218712854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 218712855 . G . PASS END=218712855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,641:0,27,255:17,0 chr2 218712856 . G . PASS END=218712862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr2 218712863 . C . PASS END=218712863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 218712864 . C . PASS END=218712864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,666:0,44,255:19,0 chr2 218712865 . T . PASS END=218712865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 218712866 . G . PASS END=218712866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,682:0,29,255:19,0 chr2 218712867 . C . PASS END=218712867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 218712868 . T . PASS END=218712880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:18,0 chr2 218712881 . G . PASS END=218712882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 218712883 . C . PASS END=218712883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,645:0,21,255:14,0 chr2 218712884 . G . PASS END=218712884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,643:0,5,255:13,0 chr2 218712885 . A . PASS END=218712886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,692:0,24,255:15,1 chr2 218712887 . G . PASS END=218712887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:34:23:0,34,810:0,34,255:15,1 chr2 218712888 . C . LowGQ END=218712890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:0:23:0,0,717:4,0,255:17,1 chr2 218712891 . C . PASS END=218712893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,754:0,30,255:17,0 chr2 218712894 . C . PASS END=218712894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr2 218712895 . T . PASS END=218712895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 218712896 . G . PASS END=218712896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:17,0 chr2 218712897 . C . PASS END=218712897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 218712898 . T . PASS END=218712898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:17,0 chr2 218712899 . G . PASS END=218712900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:17,0 chr2 218712901 . T . PASS END=218712901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,635:0,5,255:16,0 chr2 218712902 . G . PASS END=218712905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 218712906 . C . PASS END=218712906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:17,0 chr2 218712907 . T . PASS END=218712915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,662:0,54,255:19,0 chr2 218712916 . C . PASS END=218712917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 218712918 . C T, 100.71 PASS DP=19;MQ=250.00;FractionInformativeReads=0.947 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,18,0:1.000,0.000:18:0,11,0:0,7,0:51:138,54,0,669,54,669:255,60,0:0,0:1.0071e+02,5.0713e+01,3.6758e-05,4.5000e+02,8.5483e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,6,12:0,0,11,7:218712918 chr2 218712919 . G . PASS END=218712924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 218712925 . A . PASS END=218712935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,706:0,46,255:18,0 chr2 218712936 . C T, 106.73 PASS DP=21;MQ=250.00;FractionInformativeReads=0.952 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,20,0:1.000,0.000:20:0,10,0:0,10,0:57:145,60,0,730,60,730:255,66,0:0,0:1.0673e+02,5.6728e+01,9.3190e-06,4.5000e+02,9.1498e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,13:0,0,9,11:218712918 chr2 218712937 . A . PASS END=218712953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:43:17:0,43,621:0,43,255:17,0 chr2 218712954 . T . PASS END=218712954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:15,0 chr2 218712955 . C . PASS END=218712962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 218712963 . G . PASS END=218712963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 218712964 . A . PASS END=218712973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 218712974 . G . PASS END=218712989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,566:0,48,255:16,0 chr2 218712990 . A . PASS END=218712990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 218712991 . G . PASS END=218713001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,560:0,48,255:17,0 chr2 218713002 . G . PASS END=218713002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 218713003 . G . PASS END=218713048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,515:0,45,255:18,0 chr2 218713049 . T . PASS END=218713070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,32,255:13,0 chr2 218713071 . T . PASS END=218713090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:9:0,24,311:0,27,255:9,0 chr2 218713091 . G . PASS END=218713091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 218713092 . G . PASS END=218713106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 218713107 . C . PASS END=218713107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 218713108 . T . PASS END=218713116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 218713117 . G . PASS END=218713124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 218713125 . G . PASS END=218713125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 218713126 . G . PASS END=218713130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr2 218713131 . C . PASS END=218713131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 218713132 . A . PASS END=218713157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,404:0,33,255:13,0 chr2 218713158 . A . PASS END=218713158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 218713159 . G . PASS END=218713229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:19,0 chr2 218713230 . G . PASS END=218713244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,738:0,63,255:21,0 chr2 218713245 . C . PASS END=218713260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:21,0 chr2 218713261 . T . PASS END=218713261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 218713262 . C . PASS END=218713280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,62,255:26,0 chr2 218713281 . G . PASS END=218713281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 218713282 . G A, 128.26 PASS DP=27;MQ=249.85;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,18,0:0,9,0:78:166,81,0,1045,81,1045:255,81,0:0,0:1.2826e+02,7.8262e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,9:0,0,17,10 chr2 218713283 . T . PASS END=218713298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,994:0,81,255:30,0 chr2 218713299 . C . PASS END=218713299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 218713300 . A . PASS END=218713301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 218713302 . A . PASS END=218713302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:26,0 chr2 218713303 . G . PASS END=218713317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:30,0 chr2 218713318 . A . PASS END=218713318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 218713319 . T . PASS END=218713319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 218713320 . G . PASS END=218713334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:30,0 chr2 218713335 . A . PASS END=218713335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 218713336 . C . PASS END=218713342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 218713343 . G . PASS END=218713371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,64,255:26,0 chr2 218713372 . G . PASS END=218713373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 218713374 . C . PASS END=218713389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,847:0,69,255:23,0 chr2 218713390 . A . PASS END=218713390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 218713391 . A . PASS END=218713396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:23,0 chr2 218713397 . C . PASS END=218713397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 218713398 . A . PASS END=218713406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr2 218713407 . A . PASS END=218713407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:23,0 chr2 218713408 . T . PASS END=218713428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,833:0,61,255:24,0 chr2 218713429 . T . PASS END=218713439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 218713440 . G . PASS END=218713440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 218713441 . G . PASS END=218713449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 218713450 . G . PASS END=218713453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,776:0,63,255:21,0 chr2 218713454 . A . PASS END=218713454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 218713455 . G . PASS END=218713489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:24,0 chr2 218713490 . G . PASS END=218713490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr2 218713491 . G . PASS END=218713494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:25,0 chr2 218713495 . A . PASS END=218713495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 218713496 . T . PASS END=218713505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 218713506 . C . PASS END=218713506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 218713507 . T . PASS END=218713507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 218713508 . T . PASS END=218713508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:24,0 chr2 218713509 . C . PASS END=218713510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,862:0,75,255:25,0 chr2 218713511 . C . PASS END=218713511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 218713512 . T . PASS END=218713513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 218713514 . G . PASS END=218713514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:23,0 chr2 218713515 . C . PASS END=218713522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,917:0,67,255:26,0 chr2 218713523 . C . PASS END=218713523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,933:0,53,255:24,0 chr2 218713524 . A . PASS END=218713542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,895:0,62,255:26,0 chr2 218713543 . T . PASS END=218713543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 218713544 . C . PASS END=218713544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 218713545 . C . PASS END=218713546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:21,0 chr2 218713547 . G . PASS END=218713547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 218713548 . C . PASS END=218713548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:20,0 chr2 218713549 . T . PASS END=218713550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,861:0,44,255:20,0 chr2 218713551 . C . PASS END=218713551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 218713552 . C . PASS END=218713552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 218713553 . G . PASS END=218713553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 218713554 . C . PASS END=218713555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,792:0,33,255:21,0 chr2 218713556 . T . PASS END=218713556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 218713557 . C . PASS END=218713557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr2 218713558 . T . PASS END=218713558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 218713559 . C . PASS END=218713561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,815:0,33,255:22,0 chr2 218713562 . G . PASS END=218713563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 218713564 . G . PASS END=218713564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 218713565 . G . PASS END=218713565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 218713566 . A . PASS END=218713571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,800:0,33,255:23,0 chr2 218713572 . G . PASS END=218713573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 218713574 . C . PASS END=218713574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:22,0 chr2 218713575 . A . PASS END=218713575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:3:25:0,3,773:0,3,255:20,0 chr2 218713576 . G . PASS END=218713576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 218713577 . C . PASS END=218713578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:23,0 chr2 218713579 . G . PASS END=218713579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 218713580 . T . PASS END=218713580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,862:0,39,255:23,0 chr2 218713581 . G . PASS END=218713582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:24,0 chr2 218713583 . C . PASS END=218713583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:24,0 chr2 218713584 . A . PASS END=218713586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:42:27:0,42,889:0,42,255:27,0 chr2 218713587 . G . PASS END=218713588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218713589 . A . PASS END=218713589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 218713590 . G . PASS END=218713591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,84,255:25,0 chr2 218713592 . C . PASS END=218713593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:45:28:0,45,1000:0,45,255:25,0 chr2 218713594 . C . PASS END=218713594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1125:0,77,255:25,0 chr2 218713595 . C . PASS END=218713595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:25,0 chr2 218713596 . G . PASS END=218713596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 218713597 . G . PASS END=218713599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr2 218713600 . A . PASS END=218713601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:28,0 chr2 218713602 . A . PASS END=218713602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,939:0,32,255:27,0 chr2 218713603 . G . PASS END=218713604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218713605 . C . PASS END=218713607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1033:0,52,255:29,0 chr2 218713608 . G . PASS END=218713608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 218713609 . T . PASS END=218713610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1003:0,51,255:29,0 chr2 218713611 . G . PASS END=218713612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr2 218713613 . T . PASS END=218713614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1109:0,57,255:31,0 chr2 218713615 . T . PASS END=218713616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:60:33:0,60,1156:0,60,255:33,0 chr2 218713617 . G . PASS END=218713617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 218713618 . T . PASS END=218713619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1174:0,66,255:34,0 chr2 218713620 . G . PASS END=218713621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 218713622 . T . PASS END=218713622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:34,0 chr2 218713623 . C . PASS END=218713623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 218713624 . T . PASS END=218713624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:31,0 chr2 218713625 . T . PASS END=218713647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:33:0,89,1249:0,89,255:33,0 chr2 218713648 . G . PASS END=218713648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 218713649 . A . PASS END=218713784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1194:0,83,255:35,0 chr2 218713785 . T . PASS END=218713789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:25,0 chr2 218713790 . C . PASS END=218713790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr2 218713791 . C . PASS END=218713808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 218713809 . C . PASS END=218713810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,72,255:19,0 chr2 218714400 . C . PASS END=218714409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 218714410 . A . PASS END=218714413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:22,0 chr2 218714414 . C . PASS END=218714427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 218714428 . C . PASS END=218714458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:29:0,82,1133:0,82,255:34,0 chr2 218714459 . C . PASS END=218714466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 218714467 . T . PASS END=218714468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr2 218714469 . G . PASS END=218714495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:34:0,91,1235:0,91,255:37,0 chr2 218714496 . C T, 49.47 PASS DP=37;MQ=250.00;MQRankSum=5.166;ReadPosRankSum=1.387;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:20,17,0:0.459,0.000:37:10,10,0:10,7,0:48:84,0,50,608,699,1307:255,0,255:20,0:4.9474e+01,7.0669e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,16,10,7:8,12,7,10 chr2 218714497 . G . PASS END=218714533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:86:35:0,86,1304:0,86,255:37,0 chr2 218714534 . C . PASS END=218714540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1296:0,92,255:36,0 chr2 218714541 . A . PASS END=218714541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:33,0 chr2 218714542 . G . PASS END=218714549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:35:0,84,1241:0,89,255:34,0 chr2 218714550 . G . PASS END=218714551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 218714552 . G . PASS END=218714552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 218714553 . G . PASS END=218714560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 218714561 . G . PASS END=218714562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 218714563 . T . PASS END=218714583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr2 218724321 . C . PASS END=218724424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:35:0,92,1319:0,92,255:40,0 chr2 218730025 . T . PASS END=218730211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:30:0,80,1117:0,80,255:40,0 chr2 218730212 . T . PASS END=218730240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr2 218744168 . T . PASS END=218744235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:2:0,6,78:0,6,78:3,0 chr2 218745621 . C . PASS END=218745641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1135:0,93,255:32,0 chr2 218745642 . G . PASS END=218745642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 218745643 . C . PASS END=218745647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1350:0,93,255:32,0 chr2 218745648 . T . PASS END=218745684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1188:0,85,255:35,0 chr2 218745685 . G A,T, 142.39 PASS DP=33;MQ=249.88;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,1,0:0.970,0.030,0.000:33:0,19,1,0:0,13,0,0:92:180,95,0,1168,88,173,1182,95,1168,1182:255,99,0:0,0:1.4239e+02,9.2392e+01,0.0000e+00,4.5000e+02,1.2018e+02,1.7318e+02,4.5000e+02,1.2716e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77,34.77,69.54,69.54,37.77:0,0,13,20:0,0,14,19 chr2 218745686 . G . PASS END=218745691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 218745692 . T . PASS END=218745700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:26,0 chr2 218745701 . A . PASS END=218745715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:19:0,46,714:0,46,255:19,0 chr2 218745716 . C . PASS END=218745716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 218745717 . C . PASS END=218745718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 218745719 . T . PASS END=218745719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 218745720 . T . PASS END=218745722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 218745723 . C . PASS END=218745727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 218745728 . T . PASS END=218745737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:12,0 chr2 218747069 . C . PASS END=218747134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:69:0,120,1800:0,190,255:40,0 chr2 218749758 . C . PASS END=218749887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:51:0,114,1779:0,114,255:40,0 chr2 218750467 . C . PASS END=218750542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:53:0,120,1800:0,126,255:40,0 chr2 218750767 . T . PASS END=218750827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:71:0,120,1800:0,197,255:40,0 chr2 218751257 . C . PASS END=218751369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:43:0,103,1455:0,103,255:40,0 chr2 218755685 . C . PASS END=218755768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:98:42:0,98,1382:0,98,255:40,0 chr2 218757671 . C . PASS END=218757735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:39:0,102,1425:0,104,255:40,0 chr2 218758162 . C . PASS END=218758163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,958:0,70,255:28,0 chr2 218758164 . T . PASS END=218758164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 218758165 . G . PASS END=218758165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:27,0 chr2 218758166 . T . PASS END=218758166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1013:0,87,255:29,0 chr2 218758167 . T . PASS END=218758167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:26,0 chr2 218758168 . G . PASS END=218758169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 218758170 . G . PASS END=218758170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:43:30:0,43,978:0,43,255:28,0 chr2 218758171 . T . PASS END=218758171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 218758172 . A . PASS END=218758172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1023:0,74,255:28,0 chr2 218758173 . G . PASS END=218758173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,872:0,43,255:28,0 chr2 218758174 . A . PASS END=218758174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 218758175 . A . PASS END=218758176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr2 218758177 . A . PASS END=218758178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 218758179 . C . PASS END=218758179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:34:32:0,34,988:0,34,255:30,0 chr2 218758180 . G . PASS END=218758181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,1089:0,82,255:32,0 chr2 218758182 . C . PASS END=218758182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1124:0,66,255:31,0 chr2 218758183 . A . PASS END=218758202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:33:0,88,1067:0,88,255:38,0 chr2 218758203 . G . PASS END=218758203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,3:39:68:39:0,68,1308:0,68,255:36,0 chr2 218758204 . C . PASS END=218758281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:32:0,80,1127:0,80,255:40,0 chr2 218758282 . T . PASS END=218758284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1094:0,77,255:27,0 chr2 218759729 . C . PASS END=218759774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1271:0,81,255:38,0 chr2 218759775 . A . PASS END=218759775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr2 218759776 . A . PASS END=218759779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1305:0,97,255:36,0 chr2 218762518 . C . PASS END=218762534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1016:0,81,255:31,0 chr2 218762535 . C . PASS END=218762535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 218762536 . A . PASS END=218762692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:31:0,81,1030:0,81,255:40,0 chr2 218765186 . C . PASS END=218765228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,740:0,66,255:23,0 chr2 218765229 . T . PASS END=218765229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 218765230 . G . PASS END=218765230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 218765231 . G . PASS END=218765235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 218768326 . C . PASS END=218768364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:58:0,120,1800:0,167,255:40,0 chr2 218770019 . C . PASS END=218770040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1066:0,80,255:32,0 chr2 218770041 . A . PASS END=218770041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1098:0,63,255:30,0 chr2 218770042 . A . PASS END=218770120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1103:0,80,255:32,0 chr2 218770121 . A . PASS END=218770142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr2 218770143 . T . PASS END=218770143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:19,0 chr2 218770144 . G . PASS END=218770145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 218770146 . G . PASS END=218770158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr2 218770159 . G . PASS END=218770160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218770161 . C . PASS END=218770168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr2 218771058 . G . PASS END=218771067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1319:0,97,255:38,0 chr2 218771068 . A . PASS END=218771068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr2 218771069 . G . PASS END=218771075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1302:0,81,255:38,0 chr2 218771076 . C . PASS END=218771076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:64:38:0,64,1193:0,64,255:33,0 chr2 218771077 . C . PASS END=218771085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,101,1410:0,101,255:36,0 chr2 218771086 . C . PASS END=218771086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:42:38:0,42,1158:0,42,255:33,0 chr2 218771087 . C . PASS END=218771102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1244:0,92,255:35,0 chr2 218771103 . T . PASS END=218771103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1222:0,72,255:29,0 chr2 218771104 . T . PASS END=218771108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:85:30:0,85,1142:0,85,255:30,0 chr2 218771933 . C . PASS END=218771971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:35:0,99,1236:0,105,255:39,0 chr2 218771972 . G . PASS END=218771972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:27,0 chr2 218771973 . G . PASS END=218771974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:37:0,84,1260:0,111,255:28,0 chr2 218784918 . C . PASS END=218784959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:52:0,120,1800:0,130,255:40,0 chr2 218801698 . C . PASS END=218801703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:31,0 chr2 218843488 . C . PASS END=218843490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr2 218843491 . G . PASS END=218843498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 218843499 . A . PASS END=218843499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 218843500 . T . PASS END=218843520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,699:0,63,255:22,0 chr2 218843521 . G . PASS END=218843521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 218843522 . C . PASS END=218843525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 218855665 . C . PASS END=218855671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,382:0,36,255:13,0 chr2 218855672 . G . PASS END=218855741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:14:0,41,504:0,41,255:19,0 chr2 218855742 . T . PASS END=218855779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 218867563 . C . PASS END=218867564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,980:0,70,255:26,0 chr2 218867565 . A . PASS END=218867567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218867568 . G . PASS END=218867569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 218867570 . A . PASS END=218867570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 218867571 . T . PASS END=218867575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1078:0,74,255:27,0 chr2 218867576 . G . PASS END=218867595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 218874823 . C . PASS END=218874828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1133:0,87,255:30,0 chr2 218874829 . G . PASS END=218874830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1029:0,73,255:29,0 chr2 218874831 . G . PASS END=218874840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1094:0,90,255:32,0 chr2 218874841 . G . PASS END=218874849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 218874850 . C . PASS END=218874850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 218874851 . A . PASS END=218874857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:31,0 chr2 218874858 . A . PASS END=218874858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1162:0,69,255:29,0 chr2 218874859 . C . PASS END=218874868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1247:0,86,255:30,0 chr2 218874869 . T . PASS END=218874869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1117:0,69,255:28,0 chr2 218874870 . A . PASS END=218874902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1081:0,80,255:33,0 chr2 218874903 . A . PASS END=218874918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:26:0,60,948:0,60,255:27,0 chr2 218898543 . C . PASS END=218898544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:31,0 chr2 218898545 . G . PASS END=218898545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 218898546 . A . PASS END=218898684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:84:35:0,84,1280:0,84,255:40,0 chr2 218898685 . A . PASS END=218898690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:37:0,78,1170:0,111,255:26,0 chr2 218898691 . C . PASS END=218898698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1215:0,90,255:29,0 chr2 218935329 . A . PASS END=218935329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 218935330 . T . PASS END=218935333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1023:0,84,255:28,0 chr2 218935334 . A . PASS END=218935334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:27,0 chr2 218935335 . G . PASS END=218935343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,995:0,84,255:28,0 chr2 218935344 . G . PASS END=218935344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:26,0 chr2 218935345 . C . PASS END=218935351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 218935352 . C . PASS END=218935354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 218935355 . G . PASS END=218935355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 218935356 . G . PASS END=218935356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 218935357 . T . PASS END=218935357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:25,0 chr2 218935358 . C . PASS END=218935359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 218935360 . C . PASS END=218935361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 218935362 . A . PASS END=218935374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:26,0 chr2 218935473 . C . PASS END=218935475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,759:0,47,255:18,0 chr2 218935476 . C . PASS END=218935478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 218935479 . C . PASS END=218935480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 218935481 . G . PASS END=218935481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 218935482 . T . PASS END=218935492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 218935493 . C . PASS END=218935496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 218935497 . A . PASS END=218935497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,725:0,52,255:20,0 chr2 218935498 . G . PASS END=218935498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 218935499 . G . PASS END=218935527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:19:0,47,706:0,47,255:19,0 chr2 218935528 . G . PASS END=218935534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:21,0 chr2 218935535 . A . PASS END=218935535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 218935536 . G . PASS END=218935537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 218935538 . G . PASS END=218935553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr2 218935554 . T . PASS END=218935554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 218935555 . C . PASS END=218935555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 218935556 . T . PASS END=218935556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 218935557 . G . PASS END=218935582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 218937097 . T . PASS END=218937103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,763:0,69,255:23,0 chr2 218937104 . A . PASS END=218937104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 218937105 . G . PASS END=218937106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 218937107 . A . PASS END=218937107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:22,0 chr2 218937108 . A . PASS END=218937110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,876:0,69,255:26,0 chr2 218937111 . G . PASS END=218937121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1025:0,81,255:31,0 chr2 218937122 . T . PASS END=218937122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 218937123 . C . PASS END=218937124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 218937125 . T . PASS END=218937131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1157:0,93,255:31,0 chr2 218937132 . T . PASS END=218937132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 218937133 . C . PASS END=218937183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1117:0,80,255:35,0 chr2 218937184 . A . PASS END=218937184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 218937185 . A . PASS END=218937190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:29,0 chr2 218937191 . A . PASS END=218937197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 218937198 . C . PASS END=218937212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,987:0,84,255:28,0 chr2 218937213 . C . PASS END=218937218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 218937219 . C . PASS END=218937222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 218937502 . T . PASS END=218937520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,313:0,30,255:13,0 chr2 218937521 . A . PASS END=218937521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 218937522 . A . PASS END=218937527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 218937528 . T . PASS END=218937528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 218937529 . G . PASS END=218937580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,607:0,45,255:17,0 chr2 218937581 . T . PASS END=218937581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:16,0 chr2 218937582 . T . PASS END=218937594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,629:0,51,255:17,0 chr2 218937595 . T . PASS END=218937595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:13,0 chr2 218937596 . C . PASS END=218937606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 218937607 . A . PASS END=218937608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 218937966 . G . PASS END=218937995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:86:33:0,86,1225:0,86,255:37,0 chr2 218937996 . C . PASS END=218937996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1434:0,79,255:36,0 chr2 218937997 . T . PASS END=218938045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:38:0,87,1222:0,87,255:40,0 chr2 218938046 . G . PASS END=218938046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1441:0,57,255:36,0 chr2 218938047 . G . PASS END=218938088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:36:0,87,1285:0,87,255:40,0 chr2 218938089 . A . PASS END=218938089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:28,0 chr2 218938090 . G . PASS END=218938094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:30,0 chr2 218938095 . G . PASS END=218938102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,77,255:26,0 chr2 218938103 . T . PASS END=218938103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,979:0,51,255:21,0 chr2 218938104 . C . PASS END=218938109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:24,0 chr2 218938539 . G . PASS END=218938634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1174:0,86,255:40,0 chr2 218938635 . G . PASS END=218938635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:27,0 chr2 218938636 . T . PASS END=218938642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,92,255:27,0 chr2 218938643 . T . PASS END=218938644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:75:34:0,75,1125:0,102,255:25,0 chr2 218938645 . C . PASS END=218938648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr2 218938649 . A . PASS END=218938649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 218938650 . T . PASS END=218938658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 218938659 . C . PASS END=218938668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 218939816 . A . PASS END=218940235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:84:32:0,84,1260:0,91,255:40,0 chr2 218940236 . C . PASS END=218940239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:26,0 chr2 218940240 . T . PASS END=218940242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 218940243 . A . PASS END=218940243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:26,0 chr2 218940244 . G . PASS END=218940249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1215:0,86,255:28,0 chr2 218940250 . G . PASS END=218940250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 218940251 . C . PASS END=218940252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218940253 . G . PASS END=218940289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,945:0,60,255:26,0 chr2 218940290 . T . PASS END=218940291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 218940292 . A . PASS END=218940292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:26,0 chr2 218940293 . G . PASS END=218940293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 218940294 . G . PASS END=218940297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 218940298 . C . PASS END=218940305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,955:0,67,255:26,0 chr2 218940306 . G . PASS END=218940307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 218940308 . T . PASS END=218940308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 218940309 . C . PASS END=218940313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 218940314 . G . PASS END=218940314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 218940315 . G . PASS END=218940316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 218940317 . T . PASS END=218940317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 218940318 . C . PASS END=218940324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1017:0,87,255:31,0 chr2 218940325 . C . PASS END=218940325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:30,0 chr2 218940326 . C . PASS END=218940330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1132:0,93,255:31,0 chr2 218940331 . G . PASS END=218940331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 218940332 . G . PASS END=218940429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1096:0,80,255:37,0 chr2 218940430 . G . PASS END=218940430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1180:0,68,255:30,0 chr2 218940431 . C . PASS END=218940460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1194:0,83,255:31,0 chr2 218940461 . A . PASS END=218940463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 218941150 . A . PASS END=218941166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,598:0,48,255:19,0 chr2 218941167 . C . PASS END=218941186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 218941187 . C . PASS END=218941202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 218941203 . G . PASS END=218941218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,853:0,66,255:22,0 chr2 218941219 . G . PASS END=218941220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 218941221 . G . PASS END=218941221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 218941222 . G . PASS END=218941230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,767:0,50,255:19,0 chr2 218941231 . C . PASS END=218941231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218941232 . A . PASS END=218941234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 218941235 . C . PASS END=218941239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 218941240 . C . PASS END=218941256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,698:0,44,255:19,0 chr2 218947833 . G . PASS END=218947834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 218947835 . G . PASS END=218947843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:24,0 chr2 218947844 . A . PASS END=218947844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 218947845 . G . PASS END=218947852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,785:0,72,255:25,0 chr2 218947853 . A . PASS END=218947853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 218947854 . G . PASS END=218947854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 218947855 . C . PASS END=218947922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:81:27:0,81,1002:0,81,255:40,0 chr2 218947923 . T . PASS END=218947923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1504:0,79,255:36,0 chr2 218947924 . G . PASS END=218947942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,102,1530:0,114,255:38,0 chr2 218947943 . T . PASS END=218947943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:33,0 chr2 218947944 . C . PASS END=218947945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,102,1530:0,111,255:35,0 chr2 218947946 . A . PASS END=218947946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:34,0 chr2 218947947 . G . PASS END=218947975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1101:0,82,255:34,0 chr2 218947976 . T . PASS END=218947979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1080:0,90,255:26,0 chr2 218953975 . A . PASS END=218954085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:93:37:0,93,1347:0,93,255:40,0 chr2 218954209 . C . PASS END=218954212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 218954410 . T . PASS END=218954482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:87:33:0,87,1195:0,88,255:39,0 chr2 218954483 . A . PASS END=218954483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1449:0,76,255:36,0 chr2 218954484 . G . PASS END=218954532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,96,255:38,0 chr2 218954533 . A . PASS END=218954553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,77,255:26,0 chr2 218954554 . G . PASS END=218954559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 218954560 . A . PASS END=218954560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 218954675 . G . PASS END=218954777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1169:0,80,255:40,0 chr2 218999525 . A . PASS END=218999636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:88:41:0,88,1458:0,88,255:40,0 chr2 218999637 . C . PASS END=218999637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:79:52:0,79,1748:0,79,255:40,1 chr2 218999638 . A . PASS END=218999736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:82:44:0,82,1365:0,82,255:40,1 chr2 218999737 . G . PASS END=218999737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1476:0,77,255:40,0 chr2 218999738 . G . PASS END=218999908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:85:32:0,85,1174:0,85,255:40,0 chr2 218999909 . A . PASS END=218999909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:27,0 chr2 218999910 . A . PASS END=218999915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr2 218999916 . A . PASS END=218999916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1127:0,68,255:28,0 chr2 218999917 . T . PASS END=218999924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 218999925 . T . PASS END=218999925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr2 218999926 . C . PASS END=218999927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:29,0 chr2 218999928 . T . PASS END=218999928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1139:0,44,255:27,0 chr2 218999929 . G . PASS END=219000077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1185:0,80,255:40,0 chr2 219000078 . G . PASS END=219000078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:35,0 chr2 219000079 . G . PASS END=219000272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:82:39:0,82,1329:0,82,255:40,0 chr2 219000273 . T . PASS END=219000309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:66:0,120,1800:0,179,255:40,0 chr2 219000310 . C T, 260.68 PASS DP=71;MQ=128.82;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,71,0:1.000,0.000:71:0,39,0:0,32,0:211:298,214,0,2733,214,2733:255,217,0:0,0:2.6068e+02,2.1068e+02,0.0000e+00,4.5000e+02,2.4545e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,40,31:0,0,30,41 chr2 219000311 . T . PASS END=219000347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:71:0,120,1800:0,164,255:40,0 chr2 219000348 . C . PASS END=219000479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:38:0,99,1393:0,99,255:40,0 chr2 219000480 . A . PASS END=219000480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:33,0 chr2 219000481 . G . PASS END=219000484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1272:0,94,255:34,0 chr2 219000485 . T . PASS END=219000485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1199:0,69,255:34,0 chr2 219000486 . T . PASS END=219000486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 219000487 . T . PASS END=219000487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1218:0,53,255:31,0 chr2 219000488 . C . PASS END=219000594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1215:0,95,255:40,0 chr2 219000595 . C . PASS END=219000599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:75:33:0,75,1125:0,95,255:26,0 chr2 219000600 . C . PASS END=219000600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 219000601 . T . PASS END=219000601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 219000602 . C . PASS END=219000602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219000603 . T . PASS END=219000603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 219000604 . C . PASS END=219000607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 219028882 . T . PASS END=219028897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 219028898 . A . PASS END=219028898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:27,0 chr2 219028899 . C . PASS END=219028899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219028900 . A . PASS END=219028911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1024:0,71,255:26,0 chr2 219028912 . A . PASS END=219028916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 219028917 . T . PASS END=219028917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 219028918 . G . PASS END=219028955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1164:0,80,255:29,0 chr2 219028956 . T . PASS END=219028956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 219028957 . G . PASS END=219028958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1086:0,84,255:28,0 chr2 219028959 . C . PASS END=219028963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 219028964 . C . PASS END=219028964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 219028965 . C . PASS END=219028965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1111:0,65,255:26,0 chr2 219028966 . A . PASS END=219028996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1177:0,80,255:36,0 chr2 219028997 . C . PASS END=219028997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:33,0 chr2 219028998 . G . PASS END=219029051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:91:36:0,91,1234:0,91,255:39,0 chr2 219029052 . A . PASS END=219029052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1347:0,62,255:36,0 chr2 219029053 . T . PASS END=219029258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:38:0,84,1288:0,84,255:40,0 chr2 219029259 . G . PASS END=219029259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:32,0 chr2 219029260 . G . PASS END=219029356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:33:0,84,1020:0,85,255:38,0 chr2 219029357 . T . PASS END=219029357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1390:0,78,255:33,0 chr2 219029358 . T . PASS END=219029470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:39:0,87,1091:0,87,255:40,0 chr2 219029471 . A . PASS END=219029471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1528:0,77,255:38,0 chr2 219029472 . A . PASS END=219029717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:35:0,83,1280:0,83,255:40,0 chr2 219029718 . C . PASS END=219029718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:36,0 chr2 219029719 . G . PASS END=219029824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:92:36:0,92,1296:0,92,255:40,0 chr2 219029825 . A . PASS END=219029825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1388:0,65,255:38,0 chr2 219029826 . G . PASS END=219029934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:93:40:0,93,1395:0,99,255:40,0 chr2 219082194 . A . PASS END=219082196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1009:0,84,255:28,0 chr2 219082197 . A . PASS END=219082197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 219082198 . T . PASS END=219082219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1161:0,80,255:30,0 chr2 219082220 . C . PASS END=219082236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,1035:0,78,255:26,0 chr2 219082237 . T . PASS END=219082237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 219082238 . C . PASS END=219082250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 219082251 . G . PASS END=219082251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 219082252 . A . PASS END=219082255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:22,0 chr2 219082256 . C . PASS END=219082256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 219082257 . G . PASS END=219082267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,770:0,66,255:22,0 chr2 219090643 . A . PASS END=219090677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:76:0,120,1800:0,204,255:40,0 chr2 219091719 . G . PASS END=219091726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1327:0,105,255:35,0 chr2 219093461 . A . PASS END=219093573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,105,1496:0,110,255:40,0 chr2 219099075 . T . PASS END=219099121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:74:0,120,1800:0,198,255:40,0 chr2 219099572 . T . PASS END=219099579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:99:47:0,114,1654:0,114,255:40,0 chr2 219103387 . G . PASS END=219103387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1055:0,52,255:30,0 chr2 219103388 . A . PASS END=219103388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 219103389 . T . PASS END=219103389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,4:39:6:39:0,6,1119:0,6,255:34,0 chr2 219103390 . A . PASS END=219103390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,100,1297:0,100,255:35,0 chr2 219103391 . C . PASS END=219103391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1251:0,48,255:37,0 chr2 219103392 . A . PASS END=219103394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:88:40:0,88,1462:0,88,255:40,0 chr2 219103395 . G . PASS END=219103395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1415:0,74,255:40,0 chr2 219103396 . T . PASS END=219103396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1430:0,112,255:40,0 chr2 219103397 . C . PASS END=219103397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,4:43:63:43:0,63,1371:0,63,255:39,0 chr2 219103398 . T . PASS END=219103398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:99:43:0,112,1438:0,112,255:40,0 chr2 219103399 . C . PASS END=219103399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:35:43:0,35,1329:0,35,255:40,0 chr2 219103400 . T . PASS END=219103411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:86:43:0,86,1397:0,86,255:40,0 chr2 219103412 . C . PASS END=219103412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:62:50:0,62,1657:0,62,255:40,0 chr2 219103413 . C . PASS END=219103555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:34:0,84,1260:0,87,255:40,0 chr2 219103556 . T . PASS END=219103563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:29:0,63,945:0,87,255:25,0 chr2 219103564 . A . PASS END=219103564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1014:0,57,255:19,0 chr2 219103565 . T . PASS END=219103573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:20,0 chr2 219104114 . G . PASS END=219104207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:48:0,120,1800:0,128,255:40,0 chr2 219110143 . G . PASS END=219110269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:40:0,87,1362:0,87,255:40,0 chr2 219114087 . T . PASS END=219114187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:37:0,84,1260:0,93,255:40,0 chr2 219114544 . G . PASS END=219114548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:29,0 chr2 219114549 . T . PASS END=219114549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 219114550 . A . PASS END=219114551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1025:0,87,255:29,0 chr2 219114552 . T . PASS END=219114552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,987:0,73,255:29,0 chr2 219114553 . C . PASS END=219114644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:85:30:0,85,1082:0,85,255:37,0 chr2 219117668 . C . PASS END=219117669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219117670 . T . PASS END=219117674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:26,0 chr2 219117675 . T . PASS END=219117678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 219117679 . C . PASS END=219117679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:29,0 chr2 219117680 . A . PASS END=219117691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:31:0,83,1115:0,83,255:35,0 chr2 219117692 . C . PASS END=219117692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1235:0,74,255:34,0 chr2 219117693 . A . PASS END=219117693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1312:0,105,255:35,0 chr2 219117694 . G . PASS END=219117694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:34,0 chr2 219117695 . A . PASS END=219117700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,108,1303:0,108,255:37,0 chr2 219117701 . G . PASS END=219117701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:65:38:0,65,1261:0,65,255:34,0 chr2 219117702 . A . PASS END=219117744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1280:0,81,255:37,0 chr2 219117745 . T . PASS END=219117754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:31:0,69,1035:0,93,255:25,0 chr2 219117755 . G . PASS END=219117755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:23,0 chr2 219118614 . G . PASS END=219118696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:40:0,81,1305:0,81,255:40,0 chr2 219118697 . A . PASS END=219118699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:78:39:0,78,1170:0,78,255:26,0 chr2 219118700 . A . PASS END=219118700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:38:0,81,1215:0,114,255:27,0 chr2 219127447 . G . PASS END=219127460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,164:6,0 chr2 219127461 . G . PASS END=219127473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:8,0 chr2 219127474 . G . PASS END=219127506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,343:0,30,255:12,0 chr2 219127507 . C . PASS END=219127564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,535:0,42,255:19,0 chr2 219127565 . G . PASS END=219127569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 219127570 . G . PASS END=219127571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219127572 . A . PASS END=219127611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:24,0 chr2 219127612 . G . PASS END=219127613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 219127614 . G . PASS END=219127620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 219127621 . G . PASS END=219127621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 219127622 . C . PASS END=219127622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 219127623 . T . PASS END=219127624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:33:24:0,33,829:0,33,255:23,0 chr2 219127625 . G . PASS END=219127625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 219127626 . C . PASS END=219127627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr2 219127628 . G . PASS END=219127634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,876:0,69,255:26,0 chr2 219127635 . T . PASS END=219127637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 219127638 . C . PASS END=219127640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 219127641 . G . PASS END=219127642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219127643 . C . PASS END=219127643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 219127644 . T . PASS END=219127654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 219127655 . A . PASS END=219127655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:27,0 chr2 219127656 . C . PASS END=219127720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1141:0,80,255:38,0 chr2 219127721 . C . PASS END=219127721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:30,0 chr2 219127722 . C . PASS END=219127724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 219127725 . A . PASS END=219127725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:30,0 chr2 219127726 . C . PASS END=219127729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr2 219127730 . T . PASS END=219127730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 219127731 . C . PASS END=219127757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1117:0,80,255:31,0 chr2 219127758 . T . PASS END=219127771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:27:0,69,1035:0,81,255:26,0 chr2 219127772 . G . PASS END=219127772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:21,0 chr2 219127773 . A . PASS END=219127786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:22,0 chr2 219127787 . G . PASS END=219127789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 219127790 . C . PASS END=219127791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219127792 . G . PASS END=219127841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 219127842 . G . PASS END=219127847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 219127848 . G . PASS END=219127860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:19:0,54,682:0,57,255:19,0 chr2 219127861 . T . PASS END=219127865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 219127866 . G . PASS END=219127866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219127867 . T . PASS END=219127871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219127872 . C . PASS END=219127887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,698:0,57,255:19,0 chr2 219127888 . C . PASS END=219127900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 219127901 . G . PASS END=219127901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 219127902 . G . PASS END=219127936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 219127937 . C . PASS END=219127954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:19:0,54,737:0,57,255:19,0 chr2 219127955 . G . PASS END=219127960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 219127961 . G . PASS END=219127961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 219127962 . G . PASS END=219127976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,925:0,75,255:26,0 chr2 219127977 . C . PASS END=219127978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 219127979 . G . PASS END=219127996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,953:0,62,255:26,0 chr2 219127997 . C . PASS END=219127997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:23,0 chr2 219127998 . T . PASS END=219128004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 219128005 . C . PASS END=219128005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 219128006 . C . PASS END=219128011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 219128012 . C . PASS END=219128012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 219128013 . T . PASS END=219128015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 219128016 . C . PASS END=219128020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:22,0 chr2 219128021 . G . PASS END=219128021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219128022 . C . PASS END=219128023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:23,0 chr2 219128024 . C . PASS END=219128024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 219128025 . A . PASS END=219128027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 219128028 . G . PASS END=219128028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219128029 . C . PASS END=219128029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:21,0 chr2 219128030 . C . PASS END=219128031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 219128032 . G . PASS END=219128032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219128033 . C . PASS END=219128034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 219128035 . G . PASS END=219128035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 219128036 . C . PASS END=219128036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,800:0,33,255:18,0 chr2 219128037 . A . PASS END=219128040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:23:0,41,770:0,41,255:19,0 chr2 219128041 . C . PASS END=219128041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr2 219128042 . A . PASS END=219128042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,690:0,24,255:18,0 chr2 219128043 . T . PASS END=219128045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 219128046 . G . PASS END=219128046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219128047 . C . PASS END=219128048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:19,0 chr2 219128049 . G . PASS END=219128050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 219128051 . C . PASS END=219128051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 219128052 . T . PASS END=219128052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,540:0,43,255:18,0 chr2 219128053 . G . PASS END=219128054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219128055 . A . PASS END=219128055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 219128056 . G . PASS END=219128056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219128057 . C . PASS END=219128060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr2 219128061 . C . PASS END=219128061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,753:0,35,255:16,0 chr2 219128062 . A . PASS END=219128063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:17,0 chr2 219128064 . T . PASS END=219128064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,684:0,32,255:16,0 chr2 219128065 . G . PASS END=219128065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 219128066 . T . PASS END=219128066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,681:0,30,255:15,0 chr2 219128067 . G . PASS END=219128068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:17,0 chr2 219128069 . C . PASS END=219128069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,621:0,18,255:16,0 chr2 219128070 . G . PASS END=219128070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 219128071 . C . PASS END=219128071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:16,0 chr2 219128072 . G . PASS END=219128073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 219128074 . T . PASS END=219128075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 219128076 . A . PASS END=219128076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,574:0,20,255:15,0 chr2 219128077 . G . PASS END=219128079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 219128080 . C . PASS END=219128080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 219128081 . T . PASS END=219128086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 219128087 . C . PASS END=219128087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:14,0 chr2 219128088 . T . PASS END=219128088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 219128089 . G . PASS END=219128097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 219128098 . C . PASS END=219128098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,618:0,24,255:13,0 chr2 219128099 . C . PASS END=219128099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 219128100 . T . PASS END=219128101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr2 219128102 . A . PASS END=219128102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,566:0,24,255:11,0 chr2 219128103 . C . PASS END=219128103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:39:20:0,39,585:0,44,255:12,0 chr2 219128104 . C . PASS END=219128110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:16,0 chr2 219128111 . C . PASS END=219128111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 219128112 . A . PASS END=219128119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:17,0 chr2 219128120 . G . PASS END=219128120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 219128121 . C . PASS END=219128151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr2 219128152 . G . PASS END=219128155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219128156 . T . PASS END=219128160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 219128161 . G . PASS END=219128164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219128165 . T . PASS END=219128168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr2 219128169 . T . PASS END=219128173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 219128174 . A . PASS END=219128174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 219128175 . C . PASS END=219128202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr2 219128203 . G . PASS END=219128229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:47:19:0,47,706:0,47,255:19,0 chr2 219128230 . A . PASS END=219128230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,599:0,18,255:17,0 chr2 219128231 . C . PASS END=219128264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,576:0,41,255:18,0 chr2 219128265 . C . PASS END=219128265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 219128266 . A . PASS END=219128266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 219128267 . G . PASS END=219128268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 219128269 . G . PASS END=219128275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 219128276 . C . PASS END=219128276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 219128277 . C . PASS END=219128298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,570:0,48,255:17,0 chr2 219128299 . T . PASS END=219128301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 219128302 . G . PASS END=219128302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219128303 . C . PASS END=219128305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219128306 . T . PASS END=219128306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:18,0 chr2 219128307 . A . PASS END=219128309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 219128310 . C . PASS END=219128312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,855:0,56,255:20,0 chr2 219128313 . C . PASS END=219128324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 219128325 . C . PASS END=219128325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,715:0,27,255:21,0 chr2 219128326 . A . PASS END=219128356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,837:0,66,255:24,0 chr2 219128357 . G . PASS END=219128357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 219128358 . G . PASS END=219128369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,914:0,62,255:26,0 chr2 219128370 . G . PASS END=219128370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,953:0,51,255:24,0 chr2 219128371 . G . PASS END=219128408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:23:0,65,817:0,65,255:26,0 chr2 219128409 . G . PASS END=219128409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 219128410 . C . PASS END=219128431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,734:0,66,255:23,0 chr2 219128432 . T . PASS END=219128432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:18,0 chr2 219128433 . T . PASS END=219128440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 219129256 . T . PASS END=219129331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:33:0,87,1305:0,99,255:40,0 chr2 219129743 . T . PASS END=219129748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 219129749 . A . PASS END=219129755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr2 219129756 . A . PASS END=219129756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,326:0,28,255:14,0 chr2 219129757 . G . PASS END=219129765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,643:0,40,255:19,0 chr2 219129766 . C . PASS END=219129767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 219129768 . C . PASS END=219129774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:20:0,50,759:0,50,255:20,0 chr2 219129775 . G . PASS END=219129797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,793:0,66,255:23,0 chr2 219129798 . G . PASS END=219129798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 219129799 . G . PASS END=219129804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 219129805 . G . PASS END=219129806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,867:0,56,255:24,0 chr2 219129807 . T . PASS END=219129847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr2 219129848 . G . PASS END=219129872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1133:0,90,255:35,0 chr2 219129873 . C . PASS END=219129873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 219129874 . C . PASS END=219129912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:35:0,102,1228:0,104,255:40,0 chr2 219129914 . C . PASS END=219129966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:39:0,95,1307:0,95,255:40,0 chr2 219129967 . T . PASS END=219129967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:36,0 chr2 219129968 . C . PASS END=219130006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:36:0,87,1275:0,87,255:39,0 chr2 219130007 . A . PASS END=219130007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:31,0 chr2 219130008 . G . PASS END=219130018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1321:0,95,255:35,0 chr2 219130019 . G . PASS END=219130019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:34,0 chr2 219130020 . A . PASS END=219130023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1304:0,94,255:35,0 chr2 219130024 . T . PASS END=219130024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1280:0,72,255:32,0 chr2 219130025 . C . PASS END=219130063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:31:0,84,1260:0,89,255:37,0 chr2 219130065 . A . PASS END=219130184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:90:36:0,90,1395:0,90,255:40,0 chr2 219130302 . A . PASS END=219130302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219130303 . C . PASS END=219130304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 219130305 . C . PASS END=219130305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219130306 . T . PASS END=219130306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:26,0 chr2 219130307 . G . PASS END=219130312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:30,0 chr2 219130313 . G . PASS END=219130313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1078:0,69,255:29,0 chr2 219130314 . C . PASS END=219130317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:30,0 chr2 219130318 . A . PASS END=219130318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 219130319 . G . PASS END=219130322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1139:0,90,255:30,0 chr2 219130323 . T . PASS END=219130323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:30:0,60,1070:0,60,255:28,0 chr2 219130324 . C . PASS END=219130352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:30:0,80,1133:0,80,255:32,0 chr2 219130353 . T . PASS END=219130353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:31,0 chr2 219130354 . C . PASS END=219130354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 219130355 . T . PASS END=219130355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1165:0,68,255:30,0 chr2 219130356 . C . PASS END=219130365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1058:0,82,255:31,0 chr2 219130366 . G . PASS END=219130366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 219130367 . C . PASS END=219130379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 219130380 . G . PASS END=219130380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 219130381 . T . PASS END=219130382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219130383 . T . PASS END=219130384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:29:0,60,1047:0,60,255:28,0 chr2 219130385 . A . PASS END=219130405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219130554 . C . PASS END=219130558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 219130559 . C . LowGQ END=219130559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,280:9,0,255:9,0 chr2 219130560 . G . PASS END=219130567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 219130568 . C . PASS END=219130568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 219130569 . A . PASS END=219130569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 219130570 . C . PASS END=219130570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 219130571 . T . PASS END=219130575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 219130576 . A . PASS END=219130576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 219130577 . G . PASS END=219130577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 219130578 . C . PASS END=219130578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:11,0 chr2 219130579 . T . PASS END=219130587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr2 219130588 . C . PASS END=219130588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,429:0,11,255:12,0 chr2 219130589 . A . PASS END=219130591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219130592 . C . PASS END=219130622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,515:0,45,255:16,0 chr2 219130623 . C . PASS END=219130623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 219130624 . T . PASS END=219130653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,545:0,45,255:17,0 chr2 219130654 . T . PASS END=219130654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:15,0 chr2 219130655 . G . PASS END=219130669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:18,0 chr2 219130778 . C . PASS END=219130845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:42:0,83,1529:0,83,255:40,0 chr2 219130846 . T . PASS END=219130846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1402:0,79,255:36,0 chr2 219130847 . C . PASS END=219130857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:87:40:0,87,1305:0,91,255:40,0 chr2 219130858 . A . PASS END=219130863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:65:33:0,65,959:0,65,255:26,0 chr2 219130864 . C . PASS END=219130864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219130865 . T . PASS END=219130870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:64:27:0,64,902:0,64,255:26,0 chr2 219131166 . C . PASS END=219131166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 219131167 . A . PASS END=219131167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 219131168 . T . PASS END=219131174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 219131175 . G . PASS END=219131175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 219131176 . G . PASS END=219131199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,637:0,41,255:19,0 chr2 219131200 . G . PASS END=219131207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 219131208 . C . PASS END=219131209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:52:23:0,52,784:0,52,255:23,0 chr2 219131210 . T . PASS END=219131213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,900:0,72,255:24,0 chr2 219131214 . A . PASS END=219131214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,861:0,41,255:21,0 chr2 219131215 . G . PASS END=219131275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,878:0,69,255:25,0 chr2 219131276 . A . PASS END=219131294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,51,255:19,0 chr2 219131295 . G . PASS END=219131295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 219131296 . A . PASS END=219131310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:15,0 chr2 219131570 . C . PASS END=219131574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,941:0,75,255:26,0 chr2 219131575 . G . PASS END=219131591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,897:0,81,255:31,0 chr2 219131592 . G . PASS END=219131592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:30,0 chr2 219131593 . A . PASS END=219131673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1155:0,80,255:38,0 chr2 219131674 . G . PASS END=219131674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 219131675 . G . PASS END=219131681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 219131682 . C . PASS END=219131697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,71,255:26,0 chr2 219131698 . A . PASS END=219131709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:20:0,48,720:0,60,255:18,0 chr2 219132217 . C . PASS END=219132223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:26,0 chr2 219132224 . C . PASS END=219132236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:30,0 chr2 219132237 . T . PASS END=219132237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1055:0,59,255:29,0 chr2 219132238 . C . PASS END=219132249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1036:0,90,255:30,0 chr2 219132250 . G . PASS END=219132250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 219132251 . C . PASS END=219132336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1174:0,90,255:39,0 chr2 219134105 . C . PASS END=219134105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 219134106 . T . PASS END=219134106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr2 219134107 . G . PASS END=219134122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:30:0,90,1064:0,90,255:37,0 chr2 219134123 . T . PASS END=219134123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1266:0,72,255:36,0 chr2 219134124 . G . PASS END=219134321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:37:0,87,1305:0,101,255:40,0 chr2 219134689 . C . PASS END=219134697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1266:0,102,255:34,0 chr2 219134698 . G . PASS END=219134698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:32,0 chr2 219134699 . C . PASS END=219134718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:34:0,91,1183:0,91,255:36,0 chr2 219134719 . C . PASS END=219134719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr2 219134720 . C . PASS END=219134776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:34:0,83,1189:0,83,255:38,0 chr2 219134777 . A . PASS END=219134777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1216:0,72,255:29,0 chr2 219134778 . G . PASS END=219134795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:31,0 chr2 219134796 . G . PASS END=219134796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 219134797 . A . PASS END=219134802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219134803 . A . PASS END=219134809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 219135180 . C . PASS END=219135180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 219135194 . G . PASS END=219135194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 219135259 . A . PASS END=219135259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,639:0,24,255:20,0 chr2 219135260 . T . PASS END=219135262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 219135263 . C . PASS END=219135263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 219135264 . G . PASS END=219135264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 219135265 . G . PASS END=219135265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 219135266 . C . PASS END=219135268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:23,0 chr2 219135269 . T . PASS END=219135269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 219135270 . G . PASS END=219135272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 219135273 . A . PASS END=219135293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:40:16:0,40,630:0,40,255:19,0 chr2 219135294 . C . PASS END=219135294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 219135295 . C . PASS END=219135300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 219135301 . G . PASS END=219135301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219135302 . C . PASS END=219135307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 219135308 . A . PASS END=219135318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219135319 . C . PASS END=219135323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 219135324 . G . PASS END=219135326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219136104 . G . PASS END=219136116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:16,0 chr2 219136117 . A . PASS END=219136117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,537:0,12,255:16,0 chr2 219136118 . G . PASS END=219136118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 219136119 . C . PASS END=219136119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 219136120 . C . PASS END=219136125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,690:0,51,255:18,0 chr2 219136126 . T . PASS END=219136127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 219136128 . A . PASS END=219136128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 219136129 . C . PASS END=219136193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr2 219136194 . C . PASS END=219136223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:19,0 chr2 219136224 . T . PASS END=219136259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,31,255:13,0 chr2 219136260 . T . PASS END=219136272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,349:0,27,255:9,0 chr2 219137293 . G . PASS END=219137425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:95:35:0,95,1335:0,95,255:40,0 chr2 219137426 . T . PASS END=219137426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1343:0,75,255:35,0 chr2 219137427 . T . PASS END=219137471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1208:0,83,255:35,0 chr2 219137472 . G . PASS END=219137476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:22,0 chr2 219137477 . C . PASS END=219137485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:42:22:0,42,630:0,50,255:16,0 chr2 219140198 . T . PASS END=219140250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:29:0,83,1056:0,83,255:40,0 chr2 219140251 . C . PASS END=219140287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,122,255:40,0 chr2 219140288 . G C, 50.00 PASS DP=49;MQ=250.00;MQRankSum=5.980;ReadPosRankSum=4.337;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:23,26,0:0.531,0.000:49:14,13,0:9,13,0:48:85,0,50,922,794,1716:255,0,255:21,0:5.0000e+01,6.7045e-05,5.2632e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:11,12,12,14:8,15,9,17 chr2 219140289 . G . PASS END=219140325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:44:0,108,1620:0,128,255:40,0 chr2 219140326 . G . PASS END=219140338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1258:0,91,255:35,0 chr2 219140339 . C . PASS END=219140344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 219140749 . C . PASS END=219140802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:34:0,82,1188:0,82,255:40,0 chr2 219141727 . G . PASS END=219141822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:36:0,107,1365:0,107,255:40,0 chr2 219142089 . C . PASS END=219142176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:96:40:0,96,1440:0,110,255:40,0 chr2 219142356 . C . PASS END=219142393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:46:0,111,1660:0,111,255:40,0 chr2 219142658 . A . PASS END=219142697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:50:0,120,1800:0,126,255:40,0 chr2 219143238 . C . PASS END=219143266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1283:0,92,255:37,0 chr2 219143267 . G . PASS END=219143288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1261:0,95,255:37,0 chr2 219143761 . T . PASS END=219143761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 219143762 . A . PASS END=219143772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 219143773 . T . PASS END=219143773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 219143774 . A . PASS END=219143814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1117:0,87,255:31,0 chr2 219144012 . A . PASS END=219144051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,105,1723:0,105,255:40,0 chr2 219144052 . G . PASS END=219144076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:41:0,102,1530:0,110,255:40,0 chr2 219144749 . C . PASS END=219144777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:51:0,120,1800:0,123,255:40,0 chr2 219144778 . G . PASS END=219144814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:56:0,120,1800:0,144,255:40,0 chr2 219144815 . T C, 214.61 PASS DP=56;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,56,0:1.000,0.000:56:0,34,0:0,22,0:165:252,168,0,352,352,352:255,171,0:0,0:2.1461e+02,1.6461e+02,0.0000e+00,3.4938e+02,3.8415e+02,3.5239e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,30,26:0,0,32,24 chr2 219144816 . G . PASS END=219144849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:36:0,81,1215:0,92,255:40,0 chr2 219146663 . C . PASS END=219146666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:6:0,18,233:0,18,219:6,0 chr2 219146667 . G . PASS END=219146684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:9,0 chr2 219146685 . G . PASS END=219146741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,374:0,33,255:13,0 chr2 219146742 . G . PASS END=219146742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:10,0 chr2 219146743 . C . PASS END=219146750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 219146751 . G . PASS END=219146754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 219146755 . G . PASS END=219146757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:10,0 chr2 219146758 . T . PASS END=219146758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 219146759 . A . PASS END=219146762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:11,0 chr2 219146763 . T . PASS END=219146763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:10,0 chr2 219146764 . C . PASS END=219146774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 219146775 . A . PASS END=219146775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 219146776 . G . PASS END=219146778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:11,0 chr2 219146779 . G . PASS END=219146779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 219146780 . G . PASS END=219146797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,396:0,33,255:12,0 chr2 219146798 . G . PASS END=219146800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219146801 . G . PASS END=219146805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 219146806 . G . PASS END=219146809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 219146810 . C . PASS END=219146810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:8,0 chr2 219146811 . T . PASS END=219146820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:8,0 chr2 219146821 . G . PASS END=219146821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:6,0 chr2 219146822 . G . PASS END=219146824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219146825 . T . PASS END=219146825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 219146826 . G . PASS END=219146830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr2 219146831 . C . PASS END=219146834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,241:5,0 chr2 219146835 . A . PASS END=219146835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:4,0 chr2 219146836 . T . PASS END=219146864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,156:0,15,156:5,0 chr2 219187991 . A . PASS END=219187993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,341:0,27,255:9,0 chr2 219187994 . G . PASS END=219188019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,365:0,30,255:13,0 chr2 219188020 . G . PASS END=219188023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 219188024 . T . PASS END=219188029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219188030 . G . PASS END=219188037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 219188038 . C . PASS END=219188038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 219188039 . T . PASS END=219188061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,535:0,42,255:19,0 chr2 219188062 . C . PASS END=219188064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 219188065 . C . PASS END=219188082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,706:0,57,255:19,0 chr2 219188083 . C . PASS END=219188083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 219188084 . G . PASS END=219188095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr2 219188096 . C . PASS END=219188099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219188100 . G . PASS END=219188126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:15:0,40,582:0,40,255:19,0 chr2 219188127 . A . PASS END=219188146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr2 219188147 . C . PASS END=219188150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219188151 . T . PASS END=219188151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:8,0 chr2 219188152 . C . PASS END=219188154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219199426 . A . PASS END=219199481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:51:0,120,1800:0,120,255:40,0 chr2 219204506 . G . PASS END=219204523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 219204524 . C . PASS END=219204524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219204525 . A . PASS END=219204525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 219204526 . C . PASS END=219204529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr2 219204530 . G . PASS END=219204530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 219204531 . C . PASS END=219204545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1133:0,90,255:32,0 chr2 219204546 . T . PASS END=219204546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 219204547 . A . PASS END=219204552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1210:0,86,255:33,0 chr2 219204553 . A . PASS END=219204553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,1066:0,71,255:31,0 chr2 219204554 . G . PASS END=219204621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:84:34:0,84,1250:0,84,255:39,0 chr2 219204752 . G . PASS END=219204794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:26,0 chr2 219204795 . C . PASS END=219204796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219204797 . A . PASS END=219204799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 219204800 . T . PASS END=219204800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr2 219204801 . C . PASS END=219204811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1022:0,68,255:26,0 chr2 219204812 . C . PASS END=219204812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 219204813 . C . PASS END=219204815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,963:0,78,255:26,0 chr2 219204816 . G . PASS END=219204816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219204817 . G . PASS END=219204817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 219204818 . C . PASS END=219204820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219204821 . A . PASS END=219204821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:24,0 chr2 219204822 . G . PASS END=219204852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,961:0,65,255:26,0 chr2 219204853 . C . PASS END=219204853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 219204854 . G . PASS END=219204861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 219204862 . C . PASS END=219204864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:24:0,51,765:0,72,255:18,0 chr2 219205451 . G . PASS END=219205509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:33:0,88,1181:0,88,255:38,0 chr2 219206257 . G . PASS END=219206344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:33:0,91,1241:0,91,255:40,0 chr2 219206345 . A . PASS END=219206349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:33:0,78,1170:0,99,255:26,0 chr2 219206354 . G . PASS END=219206354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 219206704 . T . PASS END=219206710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:23,0 chr2 219206711 . T . PASS END=219206711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 219206712 . G . PASS END=219206721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,839:0,69,255:25,0 chr2 219206722 . T . PASS END=219206722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 219206723 . G . PASS END=219206723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 219206724 . T . PASS END=219206724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 219206725 . G . PASS END=219206729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,917:0,78,255:26,0 chr2 219206730 . G . PASS END=219206741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219206742 . T . PASS END=219206743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 219206744 . C . PASS END=219206744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219206745 . A . PASS END=219206745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219206746 . G . PASS END=219206754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,86,255:29,0 chr2 219206755 . C . PASS END=219206755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 219206756 . C . PASS END=219206773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1133:0,80,255:32,0 chr2 219206774 . A . PASS END=219206774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:30,0 chr2 219206775 . C . PASS END=219206784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1172:0,83,255:31,0 chr2 219206785 . T . PASS END=219206785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:30,0 chr2 219206786 . C . PASS END=219206786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 219206787 . T . PASS END=219206787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 219206788 . G . PASS END=219206827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1302:0,90,255:39,0 chr2 219206828 . T . PASS END=219206828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:35,0 chr2 219206829 . G . PASS END=219206854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,86,255:35,0 chr2 219206855 . C . PASS END=219206867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,911:0,68,255:26,0 chr2 219206872 . G . PASS END=219206872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 219208223 . G . PASS END=219208230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:23,0 chr2 219208231 . T . PASS END=219208248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,940:0,81,255:31,0 chr2 219208249 . A . PASS END=219208249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,978:0,60,255:28,0 chr2 219208250 . C . PASS END=219208252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219208253 . T . PASS END=219208253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 219208254 . G . PASS END=219208287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1063:0,84,255:31,0 chr2 219208288 . G . PASS END=219208309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,876:0,68,255:26,0 chr2 219209173 . G . PASS END=219209173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:24,0 chr2 219209178 . G . PASS END=219209182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:26,0 chr2 219209183 . G . PASS END=219209203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,994:0,80,255:32,0 chr2 219209204 . G . PASS END=219209204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:31,0 chr2 219209205 . G . PASS END=219209253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:33:0,87,1244:0,97,255:38,0 chr2 219209254 . G . PASS END=219209254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1233:0,75,255:28,0 chr2 219209255 . C . PASS END=219209275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 219209276 . C . PASS END=219209294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,74,255:26,0 chr2 219209530 . G . PASS END=219209531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 219209532 . G . PASS END=219209534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219209535 . C . PASS END=219209590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1219:0,87,255:36,0 chr2 219209591 . G . PASS END=219209591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1324:0,78,255:33,0 chr2 219209592 . C . PASS END=219209613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1215:0,87,255:31,0 chr2 219209614 . G . PASS END=219209628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,71,255:24,0 chr2 219209629 . T . PASS END=219209629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 219209630 . G . PASS END=219209630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219209631 . G . PASS END=219209631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 219209632 . G . PASS END=219209636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219209637 . A . PASS END=219209660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,598:0,48,255:18,0 chr2 219209661 . T . PASS END=219209693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 219209694 . A . PASS END=219209694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 219209695 . G . PASS END=219209696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 219209697 . G . PASS END=219209704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 219209859 . C . PASS END=219209859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 219209910 . C . PASS END=219209910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 219209916 . G . PASS END=219209916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219209957 . C . PASS END=219209957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 219210383 . C . PASS END=219210383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219210530 . G . PASS END=219210530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 219210542 . C . PASS END=219210542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 219210572 . T . PASS END=219210572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 219210822 . T . PASS END=219210822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 219210920 . G . PASS END=219210920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 219211009 . A . PASS END=219211009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 219211180 . A . PASS END=219211180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1333:0,95,255:36,0 chr2 219211194 . G . PASS END=219211194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,117,1482:0,117,255:39,0 chr2 219211273 . C . PASS END=219211273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 219221608 . A . PASS END=219221611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 219221612 . C . PASS END=219221616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:21,0 chr2 219221617 . A . PASS END=219221617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,737:0,32,255:20,0 chr2 219221618 . A . PASS END=219221632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,738:0,63,255:23,0 chr2 219221785 . G . PASS END=219221808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:40:0,113,1529:0,113,255:40,0 chr2 219221809 . C . PASS END=219221845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,106,1739:0,106,255:40,0 chr2 219221846 . G A, 193.56 PASS DP=50;MQ=249.47;FractionInformativeReads=0.980 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,49,0:1.000,0.000:49:0,25,0:0,24,0:144:231,147,0,1834,147,1834:255,147,0:0,0:1.9356e+02,1.4356e+02,0.0000e+00,4.5000e+02,1.7833e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,25,24:0,0,25,24 chr2 219221847 . G . PASS END=219221883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:44:0,101,1584:0,101,255:40,0 chr2 219221884 . A . PASS END=219221895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:37:0,83,1327:0,83,255:36,0 chr2 219221896 . T . PASS END=219221896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1302:0,78,255:30,0 chr2 219221897 . C . PASS END=219221910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:32,0 chr2 219222257 . A . PASS END=219222264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,706:0,51,255:19,0 chr2 219222265 . G . PASS END=219222280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,806:0,63,255:24,0 chr2 219222281 . T . PASS END=219222281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 219222282 . C . PASS END=219222286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 219222287 . C . PASS END=219222291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 219222292 . A . PASS END=219222292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:26,0 chr2 219222293 . C . PASS END=219222303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr2 219222304 . G . PASS END=219222304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 219222305 . T . PASS END=219222305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,970:0,57,255:28,0 chr2 219222306 . C . PASS END=219222308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 219222309 . A . PASS END=219222309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 219222310 . G . PASS END=219222314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1156:0,93,255:31,0 chr2 219222315 . C . PASS END=219222315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 219222316 . G . PASS END=219222351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:31:0,87,1258:0,91,255:35,0 chr2 219222352 . A . PASS END=219222352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 219222353 . G . PASS END=219222353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219222354 . A . PASS END=219222354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 219222355 . G . PASS END=219222357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 219222358 . A . PASS END=219222358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 219222359 . A . PASS END=219222376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1041:0,87,255:29,0 chr2 219222377 . G . PASS END=219222415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,876:0,61,255:26,0 chr2 219222416 . G . PASS END=219222416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 219222417 . A . PASS END=219222417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219222418 . G . PASS END=219222418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:18,0 chr2 219222419 . G . PASS END=219222431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,660:0,44,255:19,0 chr2 219222432 . A . PASS END=219222437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 219222438 . C . PASS END=219222439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,775:0,50,255:19,0 chr2 219222440 . G . PASS END=219222442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219222443 . G . PASS END=219222449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:47:21:0,47,759:0,47,255:20,0 chr2 219222450 . C . PASS END=219222452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219222453 . C . PASS END=219222453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219222454 . C . PASS END=219222457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 219222760 . G . PASS END=219222805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1008:0,85,255:34,0 chr2 219222806 . C . PASS END=219222811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:33:0,66,1094:0,66,255:26,0 chr2 219222812 . C . PASS END=219222812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219222813 . A . PASS END=219222815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 219225296 . T . PASS END=219225382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:43:0,90,1395:0,90,255:40,0 chr2 219227458 . G . PASS END=219227459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219227460 . A . PASS END=219227476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,876:0,69,255:25,0 chr2 219227477 . C . PASS END=219227480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 219227481 . T . PASS END=219227481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 219227482 . T . PASS END=219227555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:28:0,84,1062:0,84,255:36,0 chr2 219227556 . G . PASS END=219227556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:32,0 chr2 219227557 . C . PASS END=219227576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:30:0,87,1305:0,90,255:33,0 chr2 219227577 . C . PASS END=219227577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 219227578 . C . PASS END=219227581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 219227582 . T . PASS END=219227606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr2 219227607 . A . PASS END=219227607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,762:0,45,255:20,0 chr2 219227608 . C . PASS END=219227621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 219227622 . C . PASS END=219227625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:22:0,45,675:0,66,255:16,0 chr2 219229351 . C . PASS END=219229361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 219229362 . C . PASS END=219229363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 219229364 . T . PASS END=219229364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 219229365 . C . PASS END=219229373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr2 219229374 . C . PASS END=219229375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 219229376 . A . PASS END=219229386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219229387 . C . PASS END=219229390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 219229391 . A . PASS END=219229391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 219229392 . G . PASS END=219229403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:22,0 chr2 219229404 . C . PASS END=219229404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 219229405 . A . PASS END=219229424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,829:0,66,255:22,0 chr2 219229425 . C . PASS END=219229450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:19,0 chr2 219229451 . G . PASS END=219229475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 219231747 . G . PASS END=219231759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1119:0,87,255:30,0 chr2 219231760 . A . PASS END=219231760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1031:0,60,255:29,0 chr2 219231761 . G . PASS END=219231761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219231762 . A . PASS END=219231762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,978:0,38,255:29,0 chr2 219231763 . A . PASS END=219231769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:33,0 chr2 219231770 . T . PASS END=219231773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:34:0,96,1440:0,102,255:34,0 chr2 219231774 . C . PASS END=219231774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:33,0 chr2 219231775 . T . PASS END=219231806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:35:0,91,1179:0,91,255:37,0 chr2 219231807 . C T, 151.88 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,10,0:0,25,0:102:190,105,0,1320,105,1320:255,105,0:0,0:1.5188e+02,1.0188e+02,0.0000e+00,4.5000e+02,1.3665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,16:0,0,14,21 chr2 219231808 . A . PASS END=219231823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:32,0 chr2 219232153 . A . PASS END=219232241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:85:34:0,85,1127:0,85,255:40,0 chr2 219232445 . G . PASS END=219232445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 219232446 . A . PASS END=219232446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 219232447 . G . PASS END=219232467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:23,0 chr2 219232468 . C . PASS END=219232468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 219232469 . A . PASS END=219232471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:22,0 chr2 219232472 . T . PASS END=219232472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 219232473 . A . PASS END=219232474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,938:0,67,255:26,0 chr2 219232475 . C . PASS END=219232535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1215:0,87,255:38,0 chr2 219232536 . G . PASS END=219232536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:35,0 chr2 219232537 . C . PASS END=219232582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:38:0,88,1421:0,88,255:40,0 chr2 219232583 . T . PASS END=219232583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1396:0,65,255:37,0 chr2 219232584 . T . PASS END=219232616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:36:0,81,1215:0,89,255:39,0 chr2 219232617 . G . PASS END=219232634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:25:0,60,900:0,75,255:26,0 chr2 219232635 . A . PASS END=219232654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,54,255:19,0 chr2 219232655 . C . PASS END=219232672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 219232673 . T . PASS END=219232673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 219232674 . C . PASS END=219232677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 219232678 . G . PASS END=219232687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:13:0,21,315:0,39,255:9,0 chr2 219247092 . A . PASS END=219247098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 219247683 . G . PASS END=219247709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 219247710 . G . PASS END=219247717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:29,0 chr2 219247718 . T . PASS END=219247719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 219247720 . T . PASS END=219247727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1078:0,87,255:30,0 chr2 219247728 . T . PASS END=219247728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:30,0 chr2 219247729 . C . PASS END=219247749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1202:0,83,255:32,0 chr2 219247750 . C . PASS END=219247750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1164:0,68,255:27,0 chr2 219247751 . A . PASS END=219247759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:29,0 chr2 219247760 . C . PASS END=219247765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 219247766 . C . PASS END=219247770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219247771 . A . PASS END=219247771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219247772 . C . PASS END=219247777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219247778 . A . PASS END=219247778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 219247779 . G . PASS END=219247779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219247780 . A . PASS END=219247801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,67,255:25,0 chr2 219247802 . A . PASS END=219247802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,760:0,30,255:20,0 chr2 219247803 . T . PASS END=219247804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 219247805 . C . PASS END=219247805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219247806 . C . PASS END=219247812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 219247813 . A . PASS END=219247825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:19:0,49,677:0,49,255:18,0 chr2 219248966 . G . PASS END=219248966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219248967 . G . PASS END=219248967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 219248968 . C . PASS END=219248975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,831:0,69,255:24,0 chr2 219248976 . G . PASS END=219248979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 219248980 . G . PASS END=219248981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 219248982 . G . PASS END=219249012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,868:0,61,255:26,0 chr2 219249013 . C T, 48.66 PASS DP=26;MQ=250.00;MQRankSum=4.256;ReadPosRankSum=2.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:15,11,0:0.423,0.000:26:10,4,0:5,7,0:47:83,0,50,393,536,930:255,0,255:15,0:4.8659e+01,8.0765e-05,5.3000e+01,3.9344e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,8,9,2:8,7,6,5 chr2 219249014 . C . PASS END=219249016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 219249017 . A . PASS END=219249043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,945:0,64,255:26,0 chr2 219249044 . A . PASS END=219249044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 219249045 . A . PASS END=219249050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,955:0,78,255:26,0 chr2 219249051 . A . PASS END=219249052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:26,0 chr2 219249053 . T . PASS END=219249053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 219249054 . C . PASS END=219249082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,969:0,65,255:26,0 chr2 219249083 . T . PASS END=219249083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 219249084 . T . PASS END=219249085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 219249086 . A . PASS END=219249086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,831:0,58,255:22,0 chr2 219249087 . A . PASS END=219249088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 219249870 . C . PASS END=219249871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,712:0,44,255:19,0 chr2 219249872 . T . PASS END=219249877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 219249878 . G . PASS END=219249878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 219249879 . G . PASS END=219249885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:25,0 chr2 219249886 . T . PASS END=219249886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr2 219249887 . C . PASS END=219249887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 219249888 . T . PASS END=219249888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 219249889 . G . PASS END=219249891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 219249892 . C . PASS END=219249892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 219249893 . C . PASS END=219249894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:26,0 chr2 219249895 . C . PASS END=219249942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1025:0,80,255:31,0 chr2 219249943 . T . PASS END=219249965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:64:26:0,64,907:0,64,255:26,0 chr2 219249966 . G . PASS END=219249981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 219249982 . A . PASS END=219249982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 219249983 . C . PASS END=219249989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219251358 . G . PASS END=219251362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:34:0,101,1205:0,101,255:38,0 chr2 219251363 . C . PASS END=219251363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:37,0 chr2 219251364 . C . PASS END=219251470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:90:39:0,90,1350:0,94,255:40,2 chr2 219251471 . C . PASS END=219251471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1614:0,69,255:31,2 chr2 219251472 . C . PASS END=219251495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1186:0,83,255:33,0 chr2 219251496 . C . PASS END=219251499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:32:0,66,990:0,79,255:26,0 chr2 219251883 . A . PASS END=219251891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1155:0,80,255:31,0 chr2 219251892 . C . PASS END=219251902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:30:0,75,1041:0,76,255:26,0 chr2 219251903 . T . PASS END=219251947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1108:0,87,255:30,0 chr2 219251948 . A . PASS END=219251953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219252288 . G . PASS END=219252339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:42:0,105,1574:0,105,255:40,0 chr2 219252340 . G . PASS END=219252355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,102,1458:0,107,255:38,0 chr2 219252523 . T . PASS END=219252524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219252525 . T . PASS END=219252539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:24,0 chr2 219252540 . T . PASS END=219252540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:23,0 chr2 219252541 . G . PASS END=219252572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,915:0,62,255:26,0 chr2 219252573 . G . PASS END=219252575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 219252576 . C . PASS END=219252579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 219252580 . T . PASS END=219252580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,974:0,54,255:23,0 chr2 219252581 . G . PASS END=219252586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 219252587 . G . PASS END=219252589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 219252590 . G . PASS END=219252590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 219252591 . C . PASS END=219252591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219252592 . G . PASS END=219252606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,976:0,65,255:26,0 chr2 219252607 . C . PASS END=219252630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr2 219252631 . G . PASS END=219252662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:28,0 chr2 219252663 . C . PASS END=219252675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,52,255:19,0 chr2 219252676 . A . PASS END=219252678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,47,255:12,0 chr2 219254593 . T . PASS END=219254621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,861:0,69,255:25,0 chr2 219254622 . A G, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,12,0:0,14,0:75:163,78,0,1005,78,1005:255,78,0:0,0:1.2525e+02,7.5252e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,8:0,0,10,16 chr2 219254623 . G . PASS END=219254626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr2 219254627 . T . PASS END=219254630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219254631 . A . PASS END=219254631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 219254632 . G . PASS END=219254659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1023:0,81,255:31,0 chr2 219254660 . C . PASS END=219254660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 219254661 . C . PASS END=219254711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,99,255:36,0 chr2 219254712 . C . PASS END=219254712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:29,2 chr2 219254713 . T . PASS END=219254713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:36:35:0,36,1180:0,36,255:29,2 chr2 219254714 . T . PASS END=219254715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:29,0 chr2 219254716 . G . PASS END=219254732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 219254733 . G . PASS END=219254751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,907:0,64,255:26,0 chr2 219255921 . T . PASS END=219255926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:24,0 chr2 219255927 . A . PASS END=219255927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 219255928 . T . PASS END=219255928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,862:0,72,255:24,0 chr2 219255929 . C . PASS END=219255929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:23,0 chr2 219255930 . T . PASS END=219255944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:26,0 chr2 219255945 . C . PASS END=219255950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 219255951 . G . PASS END=219255951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:29,0 chr2 219255952 . A . PASS END=219255952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219255953 . C . PASS END=219255953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 219255954 . T . PASS END=219255954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219255955 . A . PASS END=219255956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 219255957 . G . PASS END=219255957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 219255958 . C . PASS END=219255958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 219255959 . C . PASS END=219255960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219255961 . A . PASS END=219255961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:26:30:0,26,930:0,26,255:26,0 chr2 219255962 . G . PASS END=219255962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 219255963 . A . PASS END=219255963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219255964 . T . PASS END=219255964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:29,0 chr2 219255965 . C . PASS END=219255966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219255967 . T . PASS END=219255967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 219255968 . C . PASS END=219255969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 219255970 . C . PASS END=219255971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 219255972 . A . PASS END=219255973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 219255974 . G . PASS END=219255974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr2 219255975 . A . PASS END=219255975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 219255976 . A . PASS END=219255976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:30,0 chr2 219255977 . C . PASS END=219255980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219255981 . G . PASS END=219255981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:29,0 chr2 219255982 . C . PASS END=219255985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 219255986 . C . PASS END=219255993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:69:30:0,69,1035:0,76,255:26,0 chr2 219255994 . T . PASS END=219255994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:24,0 chr2 219255995 . G . PASS END=219255996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:25,0 chr2 219255997 . A . PASS END=219255997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,978:0,57,255:24,0 chr2 219255998 . C . PASS END=219255998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,941:0,67,255:26,0 chr2 219255999 . A . PASS END=219255999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:25,0 chr2 219256000 . T . PASS END=219256000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 219256001 . T . PASS END=219256004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,948:0,81,255:28,0 chr2 219256005 . C . PASS END=219256010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,881:0,67,255:26,0 chr2 219256099 . G . PASS END=219256104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,900:0,69,255:24,0 chr2 219256105 . A . PASS END=219256106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219256107 . C . PASS END=219256107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:26,0 chr2 219256108 . C . PASS END=219256213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:27:0,81,1002:0,81,255:36,0 chr2 219256214 . T . PASS END=219256218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,77,255:27,0 chr2 219257704 . G . PASS END=219257710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219257711 . T . PASS END=219257711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,806:0,20,255:22,0 chr2 219257712 . G . PASS END=219257722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 219257723 . G . PASS END=219257725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 219257726 . C . PASS END=219257726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1180:0,93,255:31,0 chr2 219257727 . A . PASS END=219257727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:30,0 chr2 219257728 . C . PASS END=219257853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:90:34:0,90,1280:0,94,255:40,0 chr2 219258843 . C . PASS END=219258881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,869:0,69,255:26,0 chr2 219258882 . A . PASS END=219258889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:29,0 chr2 219258890 . C . PASS END=219258894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 219258895 . T . PASS END=219258903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219258904 . T . PASS END=219258916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1030:0,68,255:26,0 chr2 219259355 . G . PASS END=219259490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:34:0,81,1199:0,89,255:40,0 chr2 219259491 . G . PASS END=219259508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:29:0,66,990:0,87,255:26,0 chr2 219259648 . G . PASS END=219259651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219259652 . G . PASS END=219259652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 219259653 . G . PASS END=219259655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,945:0,62,255:23,0 chr2 219259656 . C . PASS END=219259656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:24,0 chr2 219259657 . T . PASS END=219259672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,906:0,62,255:26,0 chr2 219259673 . G . PASS END=219259674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 219259675 . G . PASS END=219259675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:26,0 chr2 219259676 . C . PASS END=219259682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:29,0 chr2 219259683 . T . PASS END=219259683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,953:0,54,255:27,0 chr2 219259684 . C . PASS END=219259685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219259686 . G . PASS END=219259688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 219259689 . C . PASS END=219259695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 219259696 . T . PASS END=219259698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219259699 . C . PASS END=219259723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr2 219259724 . T . PASS END=219259724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 219259725 . T . PASS END=219259728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1058:0,90,255:30,0 chr2 219259729 . G . PASS END=219259750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,74,255:26,0 chr2 219259751 . C . PASS END=219259751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 219259752 . T . PASS END=219259755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 219259756 . T . PASS END=219259758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,765:0,50,255:19,0 chr2 219263136 . A . PASS END=219263193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:36,0 chr2 219263194 . G . PASS END=219263202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:26,0 chr2 219264814 . A . PASS END=219264835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,884:0,61,255:26,0 chr2 219264836 . C . PASS END=219264837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 219264838 . C . PASS END=219264838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:24,0 chr2 219264839 . A . PASS END=219264839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219264840 . G . PASS END=219264840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219264841 . A . PASS END=219264841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219264842 . T . PASS END=219264848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219264849 . G . PASS END=219264849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219264850 . G . PASS END=219264870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:29,0 chr2 219264871 . C . PASS END=219264871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:26,0 chr2 219264872 . G . PASS END=219264875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219264876 . C . PASS END=219264880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 219265031 . G . PASS END=219265056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:23,0 chr2 219265057 . C . PASS END=219265082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,848:0,69,255:24,0 chr2 219265083 . G . PASS END=219265093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr2 219265094 . T C, 113.21 PASS DP=22;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,22,0:1.000,0.000:22:0,9,0:0,13,0:63:151,66,0,844,66,844:255,66,0:0,0:1.1321e+02,6.3211e+01,2.0709e-06,4.5000e+02,9.7981e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,11:0,0,8,14 chr2 219265095 . C . PASS END=219265102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:16,0 chr2 219265211 . A . PASS END=219265216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 219265217 . G . PASS END=219265225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 219265226 . A . PASS END=219265231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219265232 . C . PASS END=219265243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 219265244 . C . PASS END=219265249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219265250 . A . PASS END=219265253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 219265254 . T . PASS END=219265264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 219265265 . C . PASS END=219265275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:11,0 chr2 219265276 . C . PASS END=219265276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 219265277 . C . PASS END=219265296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,398:0,36,255:13,0 chr2 219265297 . T . PASS END=219265297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 219265298 . A . PASS END=219265298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 219265299 . G . PASS END=219265299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 219265300 . G . PASS END=219265303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 219265304 . T . LowGQ END=219265304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,465:7,0,255:13,0 chr2 219265305 . T . PASS END=219265305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr2 219265306 . G . PASS END=219265308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219265309 . A . PASS END=219265309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 219265310 . G . PASS END=219265316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 219265317 . C . PASS END=219265317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 219265318 . C . PASS END=219265320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 219265321 . G . PASS END=219265322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 219265323 . T . PASS END=219265330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219265331 . G . PASS END=219265335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 219265336 . G . PASS END=219265339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219265340 . G . PASS END=219265353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 219265354 . T . PASS END=219265354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:14,0 chr2 219265355 . C . PASS END=219265368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,487:0,45,255:16,0 chr2 219265369 . G . PASS END=219265369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 219265370 . C . PASS END=219265400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,448:0,45,255:16,0 chr2 219265401 . G . PASS END=219265401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 219265402 . G . PASS END=219265414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 219265415 . C . PASS END=219265415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 219265416 . C . PASS END=219265417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 219265418 . C . PASS END=219265418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr2 219265419 . G . PASS END=219265435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 219265436 . G . LowGQ END=219265436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr2 219265437 . G . PASS END=219265439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:11,0 chr2 219265440 . G . PASS END=219265447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 219265448 . C . PASS END=219265466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 219265467 . G . PASS END=219265471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219265472 . G . LowGQ END=219265472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr2 219265473 . A . PASS END=219265478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,435:0,36,255:12,0 chr2 219265479 . G . PASS END=219265479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:5:12:0,5,373:0,5,255:11,0 chr2 219265480 . T . PASS END=219265480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 219265481 . G . PASS END=219265481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 219265482 . C . PASS END=219265482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:12,0 chr2 219265483 . G . PASS END=219265483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 219265484 . C . PASS END=219265484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 219265485 . C . PASS END=219265485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 219265486 . T . PASS END=219265486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:12,0 chr2 219265487 . A . PASS END=219265487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219265488 . G . PASS END=219265490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,426:0,22,255:11,0 chr2 219265491 . G . PASS END=219265491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 219265492 . G . PASS END=219265492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:10,0 chr2 219265493 . C . PASS END=219265494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,380:0,9,255:9,0 chr2 219265495 . C . PASS END=219265495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 219265496 . G . PASS END=219265496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr2 219265497 . C . PASS END=219265497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 219265498 . A . PASS END=219265504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:22:11:0,22,388:0,22,255:9,0 chr2 219265505 . C . PASS END=219265505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 219265506 . G . LowGQ END=219265506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,3:10:0:10:0,0,222:20,0,242:7,0 chr2 219265507 . C . PASS END=219265518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,319:0,27,255:9,0 chr2 219265519 . G . LowGQ END=219265519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,257:4,0,255:7,0 chr2 219265520 . C . PASS END=219265520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 219265521 . C . PASS END=219265521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:7,0 chr2 219265522 . C . PASS END=219265524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 219265525 . A . PASS END=219265527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 219265528 . A . PASS END=219265528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 219265529 . G . PASS END=219265531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 219265532 . T . PASS END=219265535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219265536 . T . PASS END=219265536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 219265537 . C . PASS END=219265545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 219265546 . T . PASS END=219265550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 219265551 . G . PASS END=219265551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 219265552 . G . PASS END=219265554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 219265555 . C . PASS END=219265555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:10,0 chr2 219265556 . G . PASS END=219265567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,354:0,33,255:12,0 chr2 219265568 . T . PASS END=219265568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr2 219265569 . C . PASS END=219265569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 219265570 . T . PASS END=219265570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 219265571 . G . PASS END=219265577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 219265578 . C . PASS END=219265579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 219265580 . T . PASS END=219265580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr2 219265581 . T . LowGQ END=219265581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,296:6,0,255:10,0 chr2 219265582 . T . PASS END=219265595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr2 219265596 . C . LowGQ END=219265596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,304:6,0,255:10,0 chr2 219265597 . T . PASS END=219265599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:11,0 chr2 219265600 . G . PASS END=219265600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr2 219265601 . G . PASS END=219265601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 219265602 . A . PASS END=219265602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 219265603 . T . PASS END=219265607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 219265608 . A . PASS END=219265608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 219265609 . C . PASS END=219265610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,382:0,33,255:11,0 chr2 219265611 . C . PASS END=219265611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 219265612 . T . PASS END=219265612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 219265613 . G . PASS END=219265615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219265616 . C . LowGQ END=219265616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:8,0 chr2 219265617 . C . PASS END=219265619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219265620 . G . PASS END=219265621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 219265622 . T . PASS END=219265622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,288:0,16,255:9,0 chr2 219265623 . C . PASS END=219265623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 219265624 . T . PASS END=219265624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:8,0 chr2 219265625 . G . PASS END=219265632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219265633 . T . PASS END=219265633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:8,0 chr2 219265634 . C . PASS END=219265635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219265636 . C . PASS END=219265636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 219265637 . C . LowGQ END=219265637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,247:25,0,255:8,0 chr2 219265638 . T . PASS END=219265638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 219265639 . G . PASS END=219265640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 219265641 . G . LowGQ END=219265641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,318:1,0,255:9,0 chr2 219265642 . T . PASS END=219265642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 219265643 . C . LowGQ END=219265643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:1,0,255:9,0 chr2 219265644 . T . PASS END=219265645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 219265646 . G . PASS END=219265649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,266:0,13,255:9,0 chr2 219265650 . C . PASS END=219265652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 219265653 . C . PASS END=219265654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219265655 . G . PASS END=219265655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr2 219265656 . A . PASS END=219265657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219265658 . C . LowGQ END=219265658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:1,0,255:8,0 chr2 219265659 . T . PASS END=219265660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 219265661 . A . PASS END=219265661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:7,0 chr2 219265662 . G . PASS END=219265664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:8,0 chr2 219265665 . C . PASS END=219265666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,263:0,10,255:6,0 chr2 219265667 . A . LowGQ END=219265667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,257:4,0,255:6,0 chr2 219265668 . G . PASS END=219265668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 219265669 . G . PASS END=219265669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:6,0 chr2 219265670 . T . PASS END=219265671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:7,0 chr2 219265672 . G . PASS END=219265672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr2 219265673 . A . PASS END=219265674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219265675 . A . LowGQ END=219265675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,2:8:0:8:0,0,176:9,0,185:5,0 chr2 219265676 . G . PASS END=219265676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 219266287 . G . PASS END=219266347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1008:0,81,255:37,0 chr2 219266348 . C . PASS END=219266355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,105,1575:0,117,255:37,0 chr2 219266356 . T . PASS END=219266357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:76:38:0,76,1374:0,76,255:37,0 chr2 219266358 . T . PASS END=219266358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 219266359 . G . PASS END=219266363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1374:0,78,255:38,0 chr2 219266364 . G . PASS END=219266364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 219266365 . A . PASS END=219266368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1270:0,78,255:38,0 chr2 219266369 . T . PASS END=219266369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,108,1620:0,117,255:36,0 chr2 219266370 . G . PASS END=219266370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:36,0 chr2 219266371 . G . PASS END=219266384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1260:0,111,255:36,0 chr2 219266385 . G A, 50.00 PASS DP=36;MQ=249.57;MQRankSum=4.981;ReadPosRankSum=1.931;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,22,0:0.611,0.000:36:7,11,0:7,11,0:47:85,0,46,787,501,1287:255,0,255:12,0:5.0000e+01,9.6815e-05,4.9108e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,11,10,12:8,6,9,13 chr2 219266386 . C . PASS END=219266391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1215:0,90,255:28,0 chr2 219266392 . G . PASS END=219266422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,870:0,72,255:26,0 chr2 219266423 . C A, 42.33 PASS DP=25;MQ=250.00;MQRankSum=3.932;ReadPosRankSum=0.961;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,8,0:0.320,0.000:25:7,5,0:10,3,0:42:77,0,50,249,608,857:205,0,255:15,0:4.2333e+01,2.7544e-04,5.3000e+01,2.4923e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,12,2,6:11,6,5,3 chr2 219266424 . G . PASS END=219266425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 219266426 . C . PASS END=219266435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:22:0,45,675:0,56,255:15,0 chr2 219266834 . C . PASS END=219266835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 219266836 . G . PASS END=219266836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 219266837 . A . PASS END=219266938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:29:0,87,1080:0,87,255:38,0 chr2 219267072 . C . PASS END=219267078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 219267079 . A . PASS END=219267079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 219267080 . C . PASS END=219267085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 219267086 . G . PASS END=219267087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 219267088 . A . PASS END=219267089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 219267090 . T . PASS END=219267090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr2 219267091 . T . PASS END=219267094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 219267095 . C . PASS END=219267096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 219267097 . T . PASS END=219267099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219267100 . C . PASS END=219267106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:28:0,73,1025:0,73,255:26,0 chr2 219267107 . G . PASS END=219267121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 219267122 . C . PASS END=219267130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 219267734 . C . PASS END=219267742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1067:0,80,255:32,0 chr2 219267743 . T . PASS END=219267743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1017:0,63,255:30,0 chr2 219267744 . G . PASS END=219267760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1091:0,85,255:34,0 chr2 219267761 . T . PASS END=219267761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:31,0 chr2 219267762 . A . PASS END=219267763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1203:0,88,255:31,0 chr2 219267764 . G . PASS END=219267764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:31,0 chr2 219267765 . T . PASS END=219267769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1223:0,89,255:34,0 chr2 219267770 . A . PASS END=219267770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:33,0 chr2 219267771 . A . PASS END=219267841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:31:0,80,1215:0,80,255:39,0 chr2 219267842 . C . PASS END=219267850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:26,0 chr2 219267955 . T . PASS END=219267962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr2 219267963 . C . PASS END=219267967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 219267968 . T . PASS END=219267968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 219267969 . A . PASS END=219267990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:23,0 chr2 219267991 . G . PASS END=219267991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 219267992 . G . PASS END=219268000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,65,255:26,0 chr2 219268001 . G . PASS END=219268003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219268004 . C . PASS END=219268010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219268011 . G . PASS END=219268024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 219268025 . G . PASS END=219268048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,853:0,65,255:26,0 chr2 219268049 . T . PASS END=219268052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219268053 . G . PASS END=219268053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 219268054 . G . PASS END=219268059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 219268060 . A . PASS END=219268060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 219268061 . G . PASS END=219268067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1041:0,84,255:28,0 chr2 219268068 . G . PASS END=219268069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 219268070 . G . PASS END=219268076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 219268077 . C . PASS END=219268081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 219268082 . G . PASS END=219268148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1033:0,84,255:35,0 chr2 219268149 . G . PASS END=219268149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1327:0,72,255:32,0 chr2 219268150 . G . PASS END=219268191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:33,0 chr2 219268192 . G . PASS END=219268195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 219268196 . G . PASS END=219268196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 219268197 . T . PASS END=219268199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 219268200 . A . PASS END=219268203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219268204 . A . PASS END=219268205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219268206 . G . PASS END=219268235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr2 219268236 . G . PASS END=219268236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr2 219268237 . G . PASS END=219268298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1202:0,83,255:35,0 chr2 219268299 . T . PASS END=219268299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1180:0,63,255:30,0 chr2 219268300 . C . PASS END=219268303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 219268304 . C . PASS END=219268304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:28,0 chr2 219268305 . T . PASS END=219268308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:29,0 chr2 219268309 . C . PASS END=219268314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,77,255:25,0 chr2 219269020 . G . PASS END=219269048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,845:0,62,255:26,0 chr2 219269049 . G . PASS END=219269095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1041:0,80,255:33,0 chr2 219269096 . G . PASS END=219269096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:27,0 chr2 219269097 . C . PASS END=219269106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219269107 . G . PASS END=219269138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,900:0,62,255:26,0 chr2 219269139 . A . PASS END=219269145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:21:0,42,630:0,63,255:18,0 chr2 219269146 . T . PASS END=219269148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:21:0,33,495:0,63,255:12,0 chr2 219288502 . A . PASS END=219288508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 219288509 . A . PASS END=219288509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 219288510 . G . PASS END=219288557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,515:0,45,255:19,0 chr2 219288558 . G . PASS END=219288558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 219288559 . C . PASS END=219288576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 219289000 . G . PASS END=219289001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219289002 . C . PASS END=219289002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 219289003 . A . PASS END=219289003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219289004 . T . PASS END=219289005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:28,0 chr2 219289006 . C . PASS END=219289028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1066:0,87,255:31,0 chr2 219289029 . C . PASS END=219289029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 219289030 . A . PASS END=219289036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1173:0,96,255:33,0 chr2 219289037 . G . PASS END=219289037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1157:0,60,255:32,0 chr2 219289038 . A . PASS END=219289068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1155:0,80,255:33,0 chr2 219289069 . C . PASS END=219289069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219289070 . T . PASS END=219289070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,967:0,51,255:24,0 chr2 219289071 . G . PASS END=219289072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219289073 . C . PASS END=219289074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 219290338 . A . PASS END=219290379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:18,0 chr2 219290380 . T . PASS END=219290381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 219290382 . G . PASS END=219290386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,637:0,54,255:19,0 chr2 219290387 . G . PASS END=219290420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:21,0 chr2 219290421 . T . PASS END=219290423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 219290424 . C . PASS END=219290429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 219290430 . C . PASS END=219290430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 219290431 . A . PASS END=219290437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:22,0 chr2 219290438 . A . PASS END=219290438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:21,0 chr2 219290439 . G . PASS END=219290444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,776:0,63,255:24,0 chr2 219290445 . T . PASS END=219290445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 219290446 . G . PASS END=219290452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 219290453 . T . PASS END=219290453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 219290454 . G . PASS END=219290463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:23,0 chr2 219290464 . G . PASS END=219290484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:18:0,45,675:0,54,255:18,0 chr2 219290485 . C . PASS END=219290485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 219290486 . A . PASS END=219290525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:16,0 chr2 219290526 . A . PASS END=219290526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219290527 . G . PASS END=219290527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 219290528 . G . PASS END=219290531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 219290532 . T . PASS END=219290532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr2 219290533 . G . PASS END=219290534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 219292688 . G . PASS END=219292688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 219292689 . A . PASS END=219292689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:5:23:0,5,607:0,5,255:20,0 chr2 219292690 . T . PASS END=219292690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 219292691 . C . PASS END=219292691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 219292692 . C . PASS END=219292696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 219292697 . A . PASS END=219292697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 219292698 . G . PASS END=219292698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219292699 . G . PASS END=219292699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 219292700 . G . PASS END=219292723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,992:0,65,255:26,0 chr2 219292724 . C . PASS END=219292732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1063:0,84,255:28,0 chr2 219292733 . C . PASS END=219292735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219292736 . C . PASS END=219292739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 219292740 . T . PASS END=219292740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 219292741 . A . PASS END=219292767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 219292768 . A . PASS END=219292768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,932:0,70,255:27,0 chr2 219292769 . G . PASS END=219292791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1003:0,80,255:32,0 chr2 219292792 . G . PASS END=219292796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 219292950 . G . PASS END=219293055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:90:37:0,90,1350:0,98,255:40,0 chr2 219293056 . T . PASS END=219293060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 219294008 . G . PASS END=219294013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,405:0,33,255:12,0 chr2 219294014 . A . PASS END=219294026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:18,0 chr2 219294027 . A . PASS END=219294027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 219294028 . G . PASS END=219294029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 219294030 . T . PASS END=219294030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 219294031 . C . PASS END=219294034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,660:0,43,255:19,0 chr2 219294035 . G . PASS END=219294035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219294036 . A . PASS END=219294036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:19,0 chr2 219294037 . C . PASS END=219294038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219294039 . A . PASS END=219294039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 219294040 . G . PASS END=219294056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:24,0 chr2 219294057 . C . PASS END=219294057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,892:0,39,255:24,0 chr2 219294058 . C . PASS END=219294059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 219294060 . A . PASS END=219294065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr2 219294066 . G . PASS END=219294071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1061:0,71,255:26,0 chr2 219294072 . T . PASS END=219294079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:27,0 chr2 219294080 . G . PASS END=219294085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,757:0,64,255:26,0 chr2 219294086 . G . PASS END=219294089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219294090 . T . PASS END=219294090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 219294091 . G . PASS END=219294108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 219294109 . G . PASS END=219294109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 219294110 . G . PASS END=219294112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219294113 . G . PASS END=219294113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:28,0 chr2 219294114 . T . PASS END=219294122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1100:0,87,255:29,0 chr2 219294123 . A . PASS END=219294123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:29,0 chr2 219294124 . C . PASS END=219294143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1072:0,87,255:29,0 chr2 219294144 . A . PASS END=219294147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219294148 . G . PASS END=219294150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219294151 . G . PASS END=219294169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1069:0,71,255:26,0 chr2 219294170 . G . PASS END=219294170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1014:0,35,255:27,0 chr2 219294171 . T . PASS END=219294172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219294173 . G . PASS END=219294173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 219294174 . T . PASS END=219294179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 219294180 . C . PASS END=219294197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:25:0,60,900:0,75,255:25,0 chr2 219294198 . T . PASS END=219294204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr2 219294205 . G . PASS END=219294206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 219294207 . A . PASS END=219294208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219294209 . C . PASS END=219294210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 219294320 . T . PASS END=219294398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:52:0,117,1755:0,139,255:40,0 chr2 219294572 . G . PASS END=219294575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 219294576 . G . PASS END=219294615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:30:0,83,1164:0,83,255:40,0 chr2 219294616 . G . PASS END=219294616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1385:0,74,255:37,0 chr2 219294617 . A . PASS END=219294621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1510:0,107,255:40,0 chr2 219294622 . G . PASS END=219294622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1369:0,74,255:35,0 chr2 219294623 . A . PASS END=219294624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1449:0,90,255:38,0 chr2 219294625 . G . PASS END=219294625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1390:0,68,255:33,0 chr2 219294626 . A . PASS END=219294627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:85:41:0,85,1488:0,85,255:34,0 chr2 219294628 . A . PASS END=219294628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:59:41:0,59,1401:0,59,255:32,0 chr2 219294629 . G . PASS END=219294629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1357:0,73,255:34,0 chr2 219294630 . C . PASS END=219294630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:40:0,81,1330:0,81,255:35,0 chr2 219294631 . C . PASS END=219294631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,4:40:54:40:0,54,1322:0,54,255:31,0 chr2 219294632 . A . PASS END=219294632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:39:39:0,39,1260:0,39,255:33,0 chr2 219294633 . A . PASS END=219294633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,3:38:20:38:0,20,1127:0,20,255:32,0 chr2 219294634 . T . PASS END=219294635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:38:0,83,1262:0,83,255:34,0 chr2 219294636 . A . PASS END=219294636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:39:37:0,39,1186:0,39,255:32,0 chr2 219294637 . G . PASS END=219294637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 219294638 . C . PASS END=219294638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1155:0,58,255:31,0 chr2 219294639 . A . PASS END=219294639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:14:36:0,14,1096:0,14,255:31,0 chr2 219294640 . G . PASS END=219294640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1200:0,58,255:31,0 chr2 219294641 . G . PASS END=219294641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1266:0,91,255:33,0 chr2 219294642 . A . PASS END=219294642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:14:36:0,14,1169:0,14,255:31,0 chr2 219294643 . G . PASS END=219294643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 219294644 . A . PASS END=219294644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1105:0,52,255:33,0 chr2 219294645 . A . LowGQ END=219294645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:0:36:0,0,1041:9,0,255:31,0 chr2 219294646 . G . PASS END=219294646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1188:0,61,255:33,0 chr2 219294647 . A . PASS END=219294647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1139:0,36,255:31,0 chr2 219294648 . A . LowGQ END=219294648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:0:36:0,0,1005:28,0,255:28,0 chr2 219294649 . G . PASS END=219294650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:34,0 chr2 219294651 . G . PASS END=219294651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,5:36:11:36:0,11,1038:0,11,255:27,0 chr2 219294652 . A . PASS END=219294653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,4:36:42:36:0,42,1078:0,42,255:28,0 chr2 219294654 . C . PASS END=219294654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 219294655 . C . PASS END=219294655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:36:36:0,36,1096:0,36,255:29,0 chr2 219294656 . A . LowGQ END=219294656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,6:36:0:36:0,0,945:14,0,255:26,0 chr2 219294657 . T . PASS END=219294657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:29,0 chr2 219294658 . G . PASS END=219294658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr2 219294659 . A . PASS END=219294660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:35:0,44,1072:0,44,255:27,0 chr2 219294661 . C . PASS END=219294661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,88,255:28,0 chr2 219294662 . C . PASS END=219294662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:26:33:0,26,861:0,26,255:25,0 chr2 219294663 . A . PASS END=219294663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,917:0,32,255:24,0 chr2 219294664 . T . PASS END=219294664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:10:33:0,10,939:0,10,255:21,0 chr2 219294665 . G . PASS END=219294665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 219294666 . C . LowGQ END=219294666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,859:23,0,255:18,0 chr2 219294667 . G . PASS END=219294667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 219294668 . C . LowGQ END=219294668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,806:51,0,255:17,0 chr2 219294669 . T . PASS END=219294669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:40:30:0,40,900:0,40,255:20,0 chr2 219294670 . G . PASS END=219294670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:30:0,69,1035:0,90,255:23,0 chr2 219295448 . A . PASS END=219295451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,310:0,24,255:9,0 chr2 219295452 . T . PASS END=219295467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,341:0,30,255:13,0 chr2 219295468 . G . PASS END=219295485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,572:0,48,255:18,0 chr2 219295486 . G . PASS END=219295532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,762:0,60,255:22,0 chr2 219295533 . T . PASS END=219295548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr2 219295549 . A . PASS END=219295549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 219295550 . G . PASS END=219295563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:18,0 chr2 219295564 . C . PASS END=219295564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:16,0 chr2 219295565 . T . PASS END=219295621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,637:0,51,255:19,0 chr2 219295622 . G . PASS END=219295622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 219295623 . T . PASS END=219295632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr2 219295633 . A . PASS END=219295633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:13,0 chr2 219295634 . G . PASS END=219295682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,630:0,40,255:19,0 chr2 219295683 . C . PASS END=219295683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr2 219295684 . T . PASS END=219295731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,620:0,48,255:17,0 chr2 219295732 . T . PASS END=219295757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,418:0,33,255:12,0 chr2 219295758 . A . PASS END=219295765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219296580 . C . PASS END=219296680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:98:37:0,98,1356:0,98,255:40,0 chr2 219296769 . G . PASS END=219296784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,970:0,67,255:25,0 chr2 219296785 . A . PASS END=219296790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219296791 . A . PASS END=219296791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,997:0,65,255:26,0 chr2 219296792 . G . PASS END=219296793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr2 219296794 . T . PASS END=219296795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr2 219296796 . G . PASS END=219296834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1135:0,80,255:37,0 chr2 219296835 . G . PASS END=219296835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1319:0,72,255:36,0 chr2 219296836 . G . PASS END=219296884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:36:0,84,1343:0,84,255:38,0 chr2 219296885 . T . PASS END=219296885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1200:0,58,255:31,0 chr2 219296886 . T . PASS END=219296906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1149:0,82,255:34,0 chr2 219297238 . G . PASS END=219297285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:49:0,120,1800:0,147,255:40,0 chr2 219297516 . G . PASS END=219297525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219297526 . C . PASS END=219297526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 219297527 . C . PASS END=219297530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219297531 . C . PASS END=219297531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 219297532 . A . PASS END=219297545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:31,0 chr2 219297546 . G . PASS END=219297546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 219297547 . C . PASS END=219297551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1177:0,80,255:31,0 chr2 219297552 . G . PASS END=219297552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:31,0 chr2 219297553 . C . PASS END=219297606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1241:0,89,255:39,0 chr2 219297607 . G . PASS END=219297607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1366:0,78,255:38,0 chr2 219297608 . G . PASS END=219297633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:97:37:0,97,1313:0,97,255:40,0 chr2 219297634 . A . PASS END=219297634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1211:0,64,255:33,0 chr2 219297635 . T . PASS END=219297659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:82:33:0,82,1133:0,82,255:32,0 chr2 219297660 . A . PASS END=219297660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1161:0,66,255:29,0 chr2 219297661 . T . PASS END=219297662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 219297663 . G . PASS END=219297674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:27:0,72,1080:0,81,255:26,0 chr2 219299249 . G . PASS END=219299287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:35:0,94,1287:0,94,255:40,0 chr2 219299288 . T . PASS END=219299288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1490:0,74,255:40,0 chr2 219299289 . C . PASS END=219299416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:35:0,81,1215:0,97,255:40,0 chr2 219299417 . T . PASS END=219299428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:24,0 chr2 219300012 . G . PASS END=219300014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:24,0 chr2 219300015 . T . PASS END=219300015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 219300016 . G . PASS END=219300024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,848:0,72,255:24,0 chr2 219300025 . A . PASS END=219300025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 219300026 . C . PASS END=219300035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,1035:0,75,255:25,0 chr2 219300036 . A . PASS END=219300036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,777:0,48,255:23,0 chr2 219300037 . T . PASS END=219300057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,834:0,62,255:26,0 chr2 219300058 . C . PASS END=219300077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1025:0,83,255:30,0 chr2 219300078 . C . PASS END=219300078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219300079 . A . PASS END=219300090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1125:0,90,255:30,0 chr2 219300091 . A . PASS END=219300091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:28,0 chr2 219300092 . A . PASS END=219300111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1155:0,87,255:32,0 chr2 219300112 . T . PASS END=219300123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:29:0,72,1080:0,80,255:26,0 chr2 219300124 . T . PASS END=219300127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219300128 . T . PASS END=219300153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 219300154 . A . PASS END=219300157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219301205 . A . PASS END=219301336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1215:0,95,255:40,0 chr2 219301337 . T . PASS END=219301337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,79,255:25,0 chr2 219301338 . G . PASS END=219301339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,93,255:28,0 chr2 219301340 . C . PASS END=219301341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:31:0,69,1035:0,93,255:23,0 chr2 219301342 . G . PASS END=219301349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:48:28:0,48,720:0,77,255:16,0 chr2 219301847 . G . PASS END=219301848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,746:0,63,255:21,0 chr2 219301849 . C . PASS END=219301851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219301852 . C . PASS END=219301854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219301855 . C . PASS END=219301856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219301857 . G . PASS END=219301885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,620:0,62,255:24,0 chr2 219301886 . A . PASS END=219301886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,742:0,58,255:23,0 chr2 219301887 . A . PASS END=219301891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,846:0,72,255:24,0 chr2 219301892 . G . PASS END=219301892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 219301893 . C . PASS END=219301950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,925:0,75,255:26,0 chr2 219301951 . G . PASS END=219301951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 219301952 . A . PASS END=219301972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr2 219301973 . C . PASS END=219301973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:21,0 chr2 219301974 . A . PASS END=219301990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 219301991 . A . PASS END=219301991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 219301992 . C . PASS END=219302015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,837:0,66,255:23,0 chr2 219302016 . G . PASS END=219302016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 219302017 . G . PASS END=219302018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 219302019 . A . PASS END=219302035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,47,255:19,0 chr2 219303381 . A . PASS END=219303382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219303383 . C . PASS END=219303383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr2 219303384 . A . PASS END=219303384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219303385 . C . PASS END=219303391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,956:0,84,255:29,0 chr2 219303392 . C . PASS END=219303392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,984:0,32,255:27,0 chr2 219303393 . T . PASS END=219303396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 219303397 . A . PASS END=219303397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1002:0,70,255:28,0 chr2 219303398 . G . PASS END=219303400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,967:0,87,255:29,0 chr2 219303401 . C . PASS END=219303401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 219303402 . C . PASS END=219303409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1141:0,93,255:31,0 chr2 219303410 . G . PASS END=219303410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1133:0,57,255:30,0 chr2 219303411 . G . PASS END=219303449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1117:0,80,255:31,0 chr2 219305445 . G . PASS END=219305445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,798:0,63,255:21,0 chr2 219305446 . A . PASS END=219305446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 219305447 . G . PASS END=219305450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr2 219305451 . A . PASS END=219305451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 219305452 . C . PASS END=219305454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 219305455 . G . PASS END=219305455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,768:0,55,255:23,0 chr2 219305456 . C . PASS END=219305460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,917:0,75,255:26,0 chr2 219305461 . A . PASS END=219305466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,965:0,84,255:29,0 chr2 219305467 . A . PASS END=219305467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 219305468 . C . PASS END=219305468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 219305469 . G . PASS END=219305469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,919:0,56,255:28,0 chr2 219305470 . T . PASS END=219305504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:29:0,82,1050:0,82,255:34,0 chr2 219305505 . C . PASS END=219305505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:31:36:0,31,1218:0,31,255:33,0 chr2 219305506 . T . PASS END=219305513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,105,1575:0,108,255:36,0 chr2 219305514 . T . PASS END=219305514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:36,0 chr2 219305515 . T . PASS END=219305547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1281:0,92,255:36,0 chr2 219305548 . A . PASS END=219305551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:69:31:0,69,1109:0,69,255:27,0 chr2 219305552 . G . PASS END=219305552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 219305553 . C . PASS END=219305581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 219305582 . G . PASS END=219305585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219313946 . G . PASS END=219314059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:90:37:0,90,1343:0,90,255:40,0 chr2 219319653 . T . PASS END=219319655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:34:0,102,1310:0,102,255:36,0 chr2 219319656 . C . PASS END=219319656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:35,0 chr2 219319657 . A G, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,21,0:0,15,0:105:193,108,0,1396,108,1396:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,22,14:0,0,21,15 chr2 219319658 . A . PASS END=219319694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:92:36:0,92,1340:0,92,255:40,0 chr2 219319695 . T . PASS END=219319736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1215:0,87,255:40,0 chr2 219319737 . C . PASS END=219319740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219320303 . T . PASS END=219320303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 219320304 . T . PASS END=219320307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1119:0,93,255:31,0 chr2 219320308 . C . PASS END=219320309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1070:0,76,255:29,0 chr2 219320310 . T . PASS END=219320310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 219320311 . A . PASS END=219320311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1050:0,79,255:30,0 chr2 219320312 . T . PASS END=219320316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1139:0,80,255:31,0 chr2 219320317 . G . PASS END=219320317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1058:0,79,255:31,0 chr2 219320318 . A . PASS END=219320320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 219320321 . A . PASS END=219320321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1042:0,57,255:30,0 chr2 219320322 . T . PASS END=219320322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1217:0,96,255:32,0 chr2 219320323 . G . PASS END=219320323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:31,0 chr2 219320324 . T . PASS END=219320335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:82:33:0,82,1133:0,82,255:37,0 chr2 219320336 . T . PASS END=219320336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1230:0,75,255:37,0 chr2 219320337 . C . PASS END=219320434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:31:0,83,1164:0,83,255:40,0 chr2 219320435 . T . PASS END=219320436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr2 219320437 . A . PASS END=219320441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 219321815 . C . PASS END=219321884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:34:0,86,1186:0,86,255:40,0 chr2 219324513 . C . PASS END=219324628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,120,1800:0,123,255:40,0 chr2 219328029 . C . PASS END=219328089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:68:0,112,1800:0,112,255:40,0 chr2 219330733 . T . PASS END=219330741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr2 219330742 . A . PASS END=219330742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:19,0 chr2 219330743 . A . PASS END=219330745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:22,0 chr2 219330746 . C . PASS END=219330899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:81:27:0,81,986:0,81,255:40,0 chr2 219339353 . C . PASS END=219339607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:81:30:0,81,1080:0,90,255:40,0 chr2 219339608 . C . PASS END=219339608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 219341563 . T . PASS END=219341564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219341565 . T . PASS END=219341565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219341566 . T . PASS END=219341566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:26,0 chr2 219341567 . T . PASS END=219341610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1096:0,87,255:39,0 chr2 219341611 . T . PASS END=219341611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1131:0,73,255:36,0 chr2 219341612 . C . PASS END=219341664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,93,255:40,0 chr2 219341665 . G . PASS END=219341665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219341666 . C . PASS END=219341667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219341668 . T . PASS END=219341684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,884:0,61,255:26,0 chr2 219341685 . T . PASS END=219341704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:19:0,40,637:0,40,255:19,0 chr2 219343570 . T . PASS END=219343588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:116,0:116:99:115:0,120,1800:0,255,255:40,0 chr2 219344373 . T . PASS END=219344438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:69:0,120,1800:0,206,255:40,0 chr2 219346793 . A . PASS END=219346793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 219346794 . T . PASS END=219346795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:25,0 chr2 219346796 . G . PASS END=219346933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:83:31:0,83,1082:0,83,255:40,0 chr2 219346934 . C . PASS END=219346957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,889:0,67,255:26,0 chr2 219350387 . C . PASS END=219350391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:83:51:0,83,1595:0,83,255:40,0 chr2 219350392 . A . PASS END=219350392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,6:51:31:51:0,31,1427:0,31,255:40,0 chr2 219350393 . A . PASS END=219350394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:81:51:0,81,1615:0,81,255:40,0 chr2 219350395 . C . PASS END=219350396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,3:51:48:51:0,48,1500:0,48,255:40,0 chr2 219350397 . T . PASS END=219350397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:52:0,120,1800:0,139,255:40,0 chr2 219350398 . G . PASS END=219350398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,4:53:34:53:0,34,1581:0,34,255:40,0 chr2 219350399 . T . PASS END=219350399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,3:53:72:53:0,72,1582:0,72,255:40,0 chr2 219350400 . T . PASS END=219350400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:54:0,120,1800:0,146,255:40,0 chr2 219350401 . A . PASS END=219350401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,4:54:37:54:0,37,1678:0,37,255:40,0 chr2 219350402 . A . PASS END=219350413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:93:54:0,93,1800:0,93,255:40,0 chr2 219350414 . A . PASS END=219350466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:56:0,120,1800:0,127,255:40,0 chr2 219353027 . C . PASS END=219353144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:40:0,104,1465:0,104,255:40,0 chr2 219360483 . G . PASS END=219360513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1033:0,84,255:40,0 chr2 219360514 . A . PASS END=219360514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:64:44:0,64,1013:0,64,255:38,0 chr2 219360515 . C . PASS END=219360520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,112,1467:0,112,255:40,0 chr2 219360521 . A . PASS END=219360521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:73:43:0,73,1310:0,73,255:40,0 chr2 219360522 . T . PASS END=219360673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:91:43:0,91,1535:0,91,255:40,0 chr2 219362457 . A . PASS END=219362580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,138,255:40,0 chr2 219362749 . C . PASS END=219362880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:96:41:0,96,1393:0,96,255:40,0 chr2 219374702 . C . PASS END=219374702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:22,0 chr2 219374703 . C . PASS END=219374703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219374704 . C . PASS END=219374704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,909:0,50,255:25,0 chr2 219374705 . T . PASS END=219374705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219374706 . G . PASS END=219374714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1011:0,84,255:28,0 chr2 219374715 . G . PASS END=219374715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 219374716 . C . PASS END=219374852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:29:0,87,1027:0,87,255:40,0 chr2 219374853 . A . PASS END=219374863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,945:0,77,255:24,0 chr2 219393478 . T . PASS END=219393493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:90:74:0,90,1800:0,90,255:40,0 chr2 219393494 . A . PASS END=219393495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,5:72:67:71:0,67,2356:0,67,255:40,0 chr2 219393496 . G . PASS END=219393496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,7:69:47:69:0,47,2159:0,47,255:40,0 chr2 219393497 . T . PASS END=219393497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,4:69:99:69:0,120,1800:0,127,255:40,0 chr2 219393498 . A . PASS END=219393498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,8:69:52:69:0,52,2090:0,52,255:40,0 chr2 219393499 . T . PASS END=219393499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:71:68:0,71,2113:0,71,255:40,0 chr2 219393500 . C . LowGQ END=219393500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,10:67:0:67:0,0,1942:37,0,255:37,0 chr2 219393501 . T . PASS END=219393501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,3:65:99:65:0,120,1800:0,131,255:40,0 chr2 219393502 . T . PASS END=219393502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,6:63:45:63:0,45,1923:0,45,255:40,0 chr2 219393503 . A . LowGQ END=219393503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,9:63:0:63:0,0,1751:71,0,255:37,0 chr2 219393504 . T . PASS END=219393504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,5:63:84:63:0,84,2067:0,84,255:38,0 chr2 219393505 . G . LowGQ END=219393505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,12:63:0:63:0,0,1579:171,0,255:28,0 chr2 219393506 . T . PASS END=219393506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:63:0,117,1755:0,156,255:37,0 chr2 219393507 . A . LowGQ END=219393507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,7:59:0:59:0,0,1719:19,0,255:32,0 chr2 219393508 . T . PASS END=219393508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,3:59:99:59:0,111,1665:0,113,255:34,0 chr2 219393509 . T . PASS END=219393509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,5:55:67:55:0,67,1595:0,67,255:33,0 chr2 219393510 . T . LowGQ END=219393512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,9:55:0:54:0,0,1412:0,0,255:29,0 chr2 219393513 . A . PASS END=219393513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,6:54:12:54:0,12,1590:0,12,255:25,0 chr2 219393514 . C . LowGQ END=219393516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,14:51:0:49:0,0,967:122,0,255:20,0 chr2 219393517 . A . PASS END=219393517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,5:48:32:48:0,32,1346:0,32,255:26,0 chr2 219393518 . A . LowGQ END=219393519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,14:48:0:48:0,0,857:11,0,255:22,0 chr2 219393520 . A . PASS END=219393522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,3:47:72:47:0,72,1080:0,75,255:26,0 chr2 219393523 . T . LowGQ END=219393523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,13:44:0:44:0,0,736:255,0,255:11,0 chr2 219394679 . C . PASS END=219394763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:48:0,120,1800:0,144,255:40,0 chr2 219399332 . C . PASS END=219399429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:53:0,120,1800:0,143,255:40,0 chr2 219410944 . G . PASS END=219411021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:68:0,120,1800:0,129,255:40,0 chr2 219411642 . C . PASS END=219411645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 219411646 . T . PASS END=219411646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr2 219411647 . T . PASS END=219411647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 219411648 . T . PASS END=219411648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:30,0 chr2 219411649 . C . PASS END=219411814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:84:34:0,84,1239:0,86,255:40,0 chr2 219414532 . C . PASS END=219414632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:32:0,81,1200:0,83,255:40,0 chr2 219418276 . C . PASS END=219418434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:84:34:0,84,1196:0,85,255:40,0 chr2 219418435 . T . PASS END=219418435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:27,0 chr2 219418436 . G . PASS END=219418441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 219418442 . A . PASS END=219418447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 219423221 . C . PASS END=219423370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:81:37:0,81,1215:0,98,255:40,0 chr2 219423371 . A . PASS END=219423371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:27,0 chr2 219423372 . G . PASS END=219423376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219433678 . A . PASS END=219433685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,721:0,57,255:19,0 chr2 219433686 . C . PASS END=219433701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 219445284 . C . PASS END=219445288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,668:0,54,255:18,0 chr2 219445289 . G . PASS END=219445306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr2 219445307 . A . PASS END=219445347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1215:0,84,255:40,2 chr2 219445348 . C . PASS END=219445348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:78:49:0,78,1721:0,78,255:40,2 chr2 219445349 . C . PASS END=219445452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:33:0,80,1260:0,80,255:40,0 chr2 219445453 . C . PASS END=219445463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:28:0,60,900:0,84,255:26,0 chr2 219445718 . G . PASS END=219445741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:59:0,120,1800:0,161,255:40,0 chr2 219445793 . A . PASS END=219445812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:80:0,120,1800:0,205,255:40,0 chr2 219445813 . G . PASS END=219445835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:96:66:0,96,1440:0,171,255:40,0 chr2 219445836 . A . PASS END=219445837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:63:65:0,63,945:0,178,255:22,0 chr2 219447694 . G . PASS END=219447716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:29:0,83,1062:0,83,255:36,0 chr2 219447717 . T . PASS END=219447718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:36,0 chr2 219447719 . T . PASS END=219447797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1056:0,81,255:40,0 chr2 219447798 . T . PASS END=219447798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 219447799 . C . PASS END=219447799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1063:0,59,255:25,0 chr2 219447800 . C . PASS END=219447803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 219447804 . A . PASS END=219447804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:25,0 chr2 219447805 . A . PASS END=219447806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 219447807 . C . PASS END=219447807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:41:30:0,41,989:0,41,255:23,0 chr2 219447808 . A . PASS END=219447809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 219449335 . G . PASS END=219449444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:40:0,87,1364:0,87,255:40,0 chr2 219452309 . G . PASS END=219452418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:51:0,120,1800:0,136,255:40,0 chr2 219457027 . G . PASS END=219457125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:45:0,119,1659:0,119,255:40,0 chr2 219457339 . G . PASS END=219457430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:60:0,120,1800:0,165,255:40,0 chr2 219458251 . G . PASS END=219458262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:79:0,120,1800:0,237,255:40,0 chr2 219458263 . G . PASS END=219458296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:77:0,120,1800:0,202,255:40,0 chr2 219458831 . G . PASS END=219458843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 219458844 . C . PASS END=219458873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:14:0,42,511:0,42,255:19,0 chr2 219458874 . G . PASS END=219458890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,790:0,63,255:26,0 chr2 219458891 . G . PASS END=219458916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,980:0,81,255:29,0 chr2 219458917 . A . PASS END=219458917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,906:0,67,255:27,0 chr2 219458918 . A . PASS END=219458934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1055:0,84,255:29,0 chr2 219458935 . T . PASS END=219458935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 219458936 . G . PASS END=219458938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219458939 . G . PASS END=219458963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr2 219458964 . A . PASS END=219458964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,900:0,44,255:22,0 chr2 219458965 . C . PASS END=219458974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:23,0 chr2 219458975 . G . PASS END=219458976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,58,255:19,0 chr2 219458977 . G . PASS END=219458977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:18,0 chr2 219458978 . T . PASS END=219458992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,632:0,41,255:19,0 chr2 219458993 . T . PASS END=219458993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,626:0,24,255:14,0 chr2 219458994 . C . PASS END=219458996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 219458997 . T . PASS END=219458999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:39:18:0,39,585:0,41,255:13,0 chr2 219480463 . A . PASS END=219480484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1132:0,83,255:32,0 chr2 219480627 . A . PASS END=219480766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:95:37:0,95,1303:0,95,255:40,0 chr2 219480767 . G . PASS END=219480775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1395:0,108,255:34,0 chr2 219480776 . A . PASS END=219480785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:60:32:0,60,900:0,96,255:26,0 chr2 219483302 . T . PASS END=219483358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:23:0,61,846:0,61,255:26,0 chr2 219483359 . G . PASS END=219483361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1124:0,84,255:29,0 chr2 219483362 . T . PASS END=219483362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 219483363 . G . PASS END=219483368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219483369 . G . PASS END=219483370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219483371 . A . PASS END=219483412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1072:0,80,255:31,0 chr2 219483413 . G . PASS END=219483413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 219483414 . C . PASS END=219483445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1164:0,90,255:31,0 chr2 219483446 . T . PASS END=219483446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:27,0 chr2 219483447 . T . PASS END=219483450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219483451 . G . PASS END=219483452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 219483453 . G . PASS END=219483461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 219483462 . A . PASS END=219483462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1062:0,52,255:28,0 chr2 219483463 . T . PASS END=219483480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219483481 . C . PASS END=219483483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 219483484 . T . PASS END=219483485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219483486 . G . PASS END=219483486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 219483487 . G . PASS END=219483488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219483489 . G . PASS END=219483503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:27:0,67,978:0,67,255:26,0 chr2 219483504 . C . PASS END=219483505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219483506 . T . PASS END=219483518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,78,255:26,0 chr2 219483519 . G . PASS END=219483530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,765:0,57,255:18,0 chr2 219486193 . A . PASS END=219486197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1405:0,114,255:40,0 chr2 219486198 . T . PASS END=219486198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1372:0,65,255:38,0 chr2 219486199 . G . PASS END=219486299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,1:46:81:37:0,81,1274:0,81,255:40,0 chr2 219486300 . A . PASS END=219486300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1246:0,75,255:28,0 chr2 219486301 . A . PASS END=219486301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:38:0,87,1305:0,97,255:28,0 chr2 219486302 . T . PASS END=219486302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1094:0,55,255:26,0 chr2 219486303 . A . PASS END=219486313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1260:0,88,255:30,0 chr2 219486314 . C . PASS END=219486315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1011:0,76,255:28,0 chr2 219486316 . T . PASS END=219486322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1177:0,80,255:29,0 chr2 219486888 . G . PASS END=219486929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,113,1800:0,113,255:40,0 chr2 219486930 . A . PASS END=219486951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,114,1698:0,114,255:40,0 chr2 219487370 . G . PASS END=219487576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:80:30:0,80,1103:0,80,255:40,0 chr2 219487577 . G . PASS END=219487583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 219487584 . A . PASS END=219487586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:35:0,81,1215:0,89,255:28,0 chr2 219487587 . A . PASS END=219487588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:34:0,78,1170:0,102,255:26,0 chr2 219487589 . C . PASS END=219487591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1215:0,87,255:27,0 chr2 219487592 . T . PASS END=219487601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr2 219492752 . G . PASS END=219492755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 219492756 . A . PASS END=219492756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:28:0,66,658:0,66,255:27,0 chr2 219492757 . C . PASS END=219492886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:29:0,84,1260:0,85,255:40,0 chr2 219492887 . C . PASS END=219492913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:86:42:0,86,1490:0,86,255:40,0 chr2 219492914 . A . PASS END=219492914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1451:0,71,255:33,0 chr2 219492915 . C . PASS END=219492918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1305:0,82,255:31,0 chr2 219492919 . C . PASS END=219492919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:51:40:0,51,1365:0,51,255:29,0 chr2 219492920 . T . PASS END=219492923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:39:0,84,1260:0,87,255:29,0 chr2 219492924 . T C, 155.34 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,1372,108,1372:255,111,0:0,0:1.5534e+02,1.0534e+02,0.0000e+00,4.5000e+02,1.4011e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,26:0,0,12,24 chr2 219492925 . G . PASS END=219492925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:30,0 chr2 219492926 . G . PASS END=219492928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,95,255:31,0 chr2 219492929 . A . PASS END=219492929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:27,0 chr2 219492930 . G . PASS END=219492930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:33:0,81,1215:0,83,255:27,0 chr2 219492931 . A . PASS END=219492931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1132:0,60,255:27,0 chr2 219492932 . G . PASS END=219492934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1161:0,80,255:27,0 chr2 219492935 . G . PASS END=219492935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:26,0 chr2 219492936 . C . PASS END=219492936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 219492937 . G . PASS END=219492937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1139:0,58,255:26,0 chr2 219492938 . T . PASS END=219492939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:81:31:0,81,1215:0,83,255:27,0 chr2 219492940 . G . PASS END=219492940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1057:0,54,255:25,0 chr2 219492941 . A . PASS END=219492941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219492942 . G . PASS END=219492942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:24,0 chr2 219492943 . G . PASS END=219492943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1040:0,54,255:24,0 chr2 219492944 . G . PASS END=219492944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,93,255:24,0 chr2 219492945 . A . PASS END=219492945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1035:0,54,255:24,0 chr2 219492946 . T . PASS END=219492953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:25:0,66,990:0,75,255:25,0 chr2 219494242 . G . PASS END=219494259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:25,0 chr2 219494260 . C . PASS END=219494373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:28:0,81,1215:0,84,255:40,0 chr2 219494374 . G . PASS END=219494374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1399:0,74,255:35,0 chr2 219494375 . T . PASS END=219494386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:88:38:0,88,1345:0,88,255:38,0 chr2 219495369 . C . PASS END=219495373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:18,0 chr2 219495374 . C . PASS END=219495394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,800:0,63,255:24,0 chr2 219495395 . T . PASS END=219495395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 219495396 . G . PASS END=219495408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,881:0,75,255:26,0 chr2 219495409 . C . PASS END=219495409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 219495410 . A . PASS END=219495413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 219495414 . C . PASS END=219495417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219495418 . T . PASS END=219495468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:21:0,60,900:0,62,255:26,0 chr2 219495469 . C . PASS END=219495485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:18,0 chr2 219495486 . C . PASS END=219495496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:14:0,36,540:0,42,255:13,0 chr2 219495497 . T . PASS END=219495497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 219495498 . G . PASS END=219495503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 219495504 . C . PASS END=219495508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 219495509 . A . PASS END=219495517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 219495518 . C . PASS END=219495525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:12:0,21,315:0,26,255:10,0 chr2 219496859 . G . PASS END=219496859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219496860 . A . PASS END=219496860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 219496861 . G . PASS END=219496869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,792:0,66,255:22,0 chr2 219496870 . G . PASS END=219496870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 219496871 . A . PASS END=219496878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,742:0,66,255:23,0 chr2 219496879 . G . PASS END=219496879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 219496880 . G . PASS END=219496886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,831:0,69,255:24,0 chr2 219496887 . G . PASS END=219496887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 219496888 . G . PASS END=219496900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,878:0,61,255:26,0 chr2 219496901 . C . PASS END=219496906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,995:0,84,255:29,0 chr2 219496907 . G . PASS END=219496907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 219496908 . A . PASS END=219496914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:31,0 chr2 219496915 . G . PASS END=219496915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr2 219496916 . G . PASS END=219496933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1155:0,80,255:32,0 chr2 219496934 . G . PASS END=219496934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,1016:0,49,255:28,0 chr2 219496935 . C . PASS END=219496984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1128:0,88,255:35,0 chr2 219496985 . A . PASS END=219497025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr2 219497026 . C . PASS END=219497035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr2 219498109 . G . PASS END=219498198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:43:0,112,1513:0,112,255:40,0 chr2 219498199 . C . PASS END=219498199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:54:42:0,54,1365:0,54,255:35,0 chr2 219498200 . G . PASS END=219498204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1488:0,107,255:38,0 chr2 219498328 . A . PASS END=219498479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:83:36:0,83,1080:0,83,255:40,0 chr2 219498480 . G . PASS END=219498480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:29,0 chr2 219498481 . G . PASS END=219498484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr2 219498828 . G . PASS END=219498944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:88:31:0,88,1009:0,88,255:40,0 chr2 219499181 . T . PASS END=219499195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,861:0,66,255:26,0 chr2 219499196 . A . PASS END=219499338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:29:0,81,1215:0,87,255:40,0 chr2 219499339 . A . PASS END=219499339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:39:0,78,1170:0,117,255:26,0 chr2 219499340 . C . PASS END=219499340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:38:0,84,1260:0,114,255:28,0 chr2 219499341 . T . PASS END=219499341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1283:0,75,255:27,0 chr2 219499342 . C . PASS END=219499344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 219499345 . T . PASS END=219499353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:28:0,63,945:0,84,255:26,0 chr2 219500519 . G . PASS END=219500526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,961:0,75,255:26,0 chr2 219500527 . C . PASS END=219500530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 219500531 . C . PASS END=219500531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 219500532 . A . PASS END=219500535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 219500536 . A . PASS END=219500536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 219500537 . C . PASS END=219500654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:29:0,80,1163:0,80,255:40,0 chr2 219500966 . G . PASS END=219500966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 219500967 . T . PASS END=219500967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1015:0,73,255:29,0 chr2 219500968 . T . PASS END=219500969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr2 219500970 . T . PASS END=219500971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:51:30:0,51,1015:0,51,255:31,0 chr2 219500972 . A . PASS END=219501095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:34:0,84,1213:0,84,255:40,0 chr2 219501096 . T . PASS END=219501132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:38:0,84,1260:0,114,255:40,0 chr2 219501133 . G A, 160.43 PASS DP=38;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,38,0:1.000,0.000:38:0,16,0:0,22,0:110:198,113,0,298,298,298:255,114,0:0,0:1.6043e+02,1.1043e+02,0.0000e+00,2.9520e+02,3.2997e+02,2.9821e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,12,26:0,0,18,20 chr2 219501134 . C . PASS END=219501134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:90:38:0,90,1350:0,98,255:29,0 chr2 219501135 . C . PASS END=219501135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:30,0 chr2 219501136 . C . PASS END=219501136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:36:0,87,1305:0,108,255:29,0 chr2 219501137 . C . PASS END=219501137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:29,0 chr2 219501138 . T . PASS END=219501161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:32,0 chr2 219501162 . C . PASS END=219501164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:25,0 chr2 219501165 . T . PASS END=219501167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:34:0,90,1350:0,102,255:30,0 chr2 219501168 . T . PASS END=219501168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:28,0 chr2 219501169 . A . PASS END=219501170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:29,0 chr2 219501171 . T . PASS END=219501183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,89,255:30,0 chr2 219501184 . C . PASS END=219501187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 219501188 . T . PASS END=219501253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1141:0,86,255:32,0 chr2 219501254 . T . PASS END=219501264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 219501265 . T . PASS END=219501268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,886:0,42,255:25,0 chr2 219501269 . T . PASS END=219501289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,923:0,69,255:25,0 chr2 219501290 . A . PASS END=219501290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 219501291 . T . PASS END=219501300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:49:22:0,49,731:0,49,255:19,0 chr2 219503062 . T . PASS END=219503067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 219503068 . C . PASS END=219503106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:25,0 chr2 219503107 . G . PASS END=219503107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:23,0 chr2 219503108 . G . PASS END=219503123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,914:0,62,255:26,0 chr2 219503124 . C . PASS END=219503130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 219503131 . C . PASS END=219503131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,962:0,48,255:27,0 chr2 219503132 . A . PASS END=219503146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:30,0 chr2 219503147 . G . PASS END=219503147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 219503148 . T . PASS END=219503162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:31:0,83,1164:0,83,255:32,0 chr2 219503163 . C . PASS END=219503163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1194:0,69,255:30,0 chr2 219503164 . C . PASS END=219503175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:31,0 chr2 219503176 . T . PASS END=219503181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:77:29:0,77,1086:0,77,255:27,0 chr2 219503182 . G . PASS END=219503201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1194:0,90,255:31,0 chr2 219503202 . T . PASS END=219503202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 219503203 . G . PASS END=219503226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1194:0,86,255:34,0 chr2 219503227 . C . PASS END=219503227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:33,0 chr2 219503228 . T . PASS END=219503251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:33:0,85,1134:0,85,255:34,0 chr2 219503252 . A . PASS END=219503252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:30,0 chr2 219503253 . G . PASS END=219503276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr2 219503277 . C . PASS END=219503278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:31:0,78,1170:0,93,255:26,0 chr2 219503279 . G . PASS END=219503293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:31,0 chr2 219503294 . T . PASS END=219503294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 219503295 . G . PASS END=219503295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 219503296 . A . PASS END=219503297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 219503298 . G . PASS END=219503307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 219503308 . A . PASS END=219503308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 219503309 . G . PASS END=219503314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:30,0 chr2 219503315 . C . PASS END=219503315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 219503316 . A . PASS END=219503323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1111:0,90,255:30,0 chr2 219503324 . G . PASS END=219503335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1100:0,74,255:26,0 chr2 219503336 . A . PASS END=219503488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:29:0,81,1120:0,83,255:36,0 chr2 219503489 . T . PASS END=219503489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1156:0,68,255:28,0 chr2 219503490 . T . PASS END=219503501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1177:0,80,255:30,0 chr2 219503502 . C . PASS END=219503518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,994:0,70,255:26,0 chr2 219503519 . T . PASS END=219503523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:25,0 chr2 219503524 . C . PASS END=219503529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 219503530 . T . PASS END=219503531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:24:0,57,855:0,72,255:19,0 chr2 219505387 . C . PASS END=219505491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:39:0,81,1215:0,99,255:40,0 chr2 219505492 . A . PASS END=219505492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,105,255:25,0 chr2 219506751 . C . PASS END=219506982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:81:30:0,81,1094:0,81,255:40,1 chr2 219506983 . G . PASS END=219507032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,945:0,62,255:26,0 chr2 219507033 . C . PASS END=219507048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:51:19:0,51,765:0,57,255:19,0 chr2 219507049 . T . PASS END=219507049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:19,0 chr2 219507050 . T . PASS END=219507054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 219507055 . A . PASS END=219507055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 219507056 . G . PASS END=219507061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 219507062 . C . PASS END=219507188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr2 219507189 . C . PASS END=219507190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 219507191 . G . PASS END=219507223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 219507224 . T . PASS END=219507230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219507231 . C . PASS END=219507275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:17,0 chr2 219507276 . T . PASS END=219507276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr2 219507277 . G . PASS END=219507298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,604:0,41,255:18,0 chr2 219507299 . G . PASS END=219507301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219507302 . C . PASS END=219507309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:19,0 chr2 219507310 . G . PASS END=219507329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:21,0 chr2 219507330 . C . PASS END=219507340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr2 219507341 . C . PASS END=219507368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:26,0 chr2 219507369 . C . PASS END=219507370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 219507371 . G . PASS END=219507377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219507378 . G . PASS END=219507488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1147:0,80,255:33,0 chr2 219507489 . T . PASS END=219507520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:25,0 chr2 219507521 . T . PASS END=219507521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219507522 . G . PASS END=219507534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 219507535 . T . PASS END=219507539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 219507540 . G . PASS END=219507544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219507545 . A . PASS END=219507545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,654:0,46,255:19,0 chr2 219507546 . G . PASS END=219507558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,814:0,63,255:22,0 chr2 219507559 . C . PASS END=219507559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 219507560 . G . PASS END=219507567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 219507568 . C . PASS END=219507568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:21,0 chr2 219507569 . C . PASS END=219507569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 219507570 . T . PASS END=219507570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 219507571 . G . PASS END=219507593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:22,0 chr2 219507594 . T . PASS END=219507594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:19,0 chr2 219507595 . A . PASS END=219507606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,715:0,60,255:20,0 chr2 219507607 . C . PASS END=219507607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,729:0,57,255:19,0 chr2 219507608 . T . PASS END=219507610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 219507611 . T . PASS END=219507636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,609:0,54,255:19,0 chr2 219507637 . T . PASS END=219507637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 219507638 . G . PASS END=219507672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,690:0,44,255:19,0 chr2 219507673 . T . PASS END=219507673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219507674 . G . PASS END=219507674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 219507675 . C . PASS END=219507681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,707:0,60,255:20,0 chr2 219507682 . A . PASS END=219507729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,47,255:19,0 chr2 219507730 . T . PASS END=219507732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 219507733 . G . PASS END=219507734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 219507735 . C . PASS END=219507735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,604:0,23,255:14,0 chr2 219507736 . C . PASS END=219507737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:14,1 chr2 219507738 . G . PASS END=219507738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:15,0 chr2 219507739 . G . PASS END=219507742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:15,0 chr2 219507743 . C . PASS END=219507743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 219507744 . A . PASS END=219507745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,574:0,45,255:15,0 chr2 219507746 . G . PASS END=219507746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 219507747 . G . PASS END=219507749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 219507750 . T . PASS END=219507750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 219507751 . G . PASS END=219507751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,659:0,51,255:17,0 chr2 219507752 . G . PASS END=219507752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 219507753 . G . PASS END=219507771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,620:0,48,255:19,0 chr2 219507772 . C . PASS END=219507775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 219507776 . T . PASS END=219507802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:19,0 chr2 219507803 . C . PASS END=219507803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 219507804 . A . PASS END=219507838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,615:0,44,255:21,0 chr2 219507839 . C . PASS END=219507840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 219507841 . C . PASS END=219507841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr2 219507842 . C . PASS END=219507847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:26,0 chr2 219507848 . C . PASS END=219507850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 219507851 . C . PASS END=219507851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 219507852 . G . PASS END=219507852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 219507853 . A . PASS END=219507873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:26:0,64,941:0,64,255:26,0 chr2 219507874 . T . PASS END=219507884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:28,0 chr2 219507885 . A . PASS END=219507885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219507886 . G . PASS END=219507890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219507891 . T . PASS END=219507891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr2 219507892 . T . PASS END=219507892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219507893 . C . PASS END=219507893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 219507894 . C . PASS END=219507895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219507896 . G . PASS END=219507896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:26,0 chr2 219507897 . C . PASS END=219507902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219507903 . G . PASS END=219507903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 219507904 . C . PASS END=219507906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219507907 . A . PASS END=219507907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219507908 . A . PASS END=219507909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219507910 . G . PASS END=219507910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 219507911 . G . PASS END=219507911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219507912 . A . PASS END=219507913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:26,0 chr2 219507914 . A . PASS END=219507921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219507922 . C . PASS END=219507923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 219507924 . G . PASS END=219507939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1111:0,87,255:30,0 chr2 219507940 . T . PASS END=219507940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 219507941 . T . PASS END=219507974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1155:0,87,255:30,0 chr2 219507975 . A . PASS END=219507977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1055:0,74,255:25,0 chr2 219507978 . G . PASS END=219507982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 219507983 . A . PASS END=219508020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,925:0,63,255:26,0 chr2 219508021 . T . PASS END=219508021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,917:0,40,255:22,0 chr2 219508022 . T . PASS END=219508026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,939:0,65,255:26,0 chr2 219508027 . A . PASS END=219508027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,970:0,45,255:25,0 chr2 219508028 . A . PASS END=219508029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219508030 . G . PASS END=219508030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:25,0 chr2 219508031 . G . PASS END=219508035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219508036 . A . PASS END=219508036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219508037 . C . PASS END=219508042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 219508043 . G . PASS END=219508045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1033:0,73,255:26,0 chr2 219508046 . G . PASS END=219508046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1022:0,57,255:23,0 chr2 219508047 . G . PASS END=219508051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:74:30:0,74,1047:0,74,255:26,1 chr2 219508052 . G . PASS END=219508053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,1 chr2 219508054 . G . PASS END=219508058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 219508059 . C . PASS END=219508059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:25,0 chr2 219508060 . C . PASS END=219508068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 219508069 . C . PASS END=219508071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:26,0 chr2 219508072 . C . PASS END=219508072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219508073 . C . PASS END=219508077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:70:28:0,70,1002:0,70,255:26,0 chr2 219508078 . C . PASS END=219508082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219508083 . T . PASS END=219508083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,942:0,48,255:27,1 chr2 219508084 . C . PASS END=219508085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,947:0,32,255:26,1 chr2 219508086 . C . PASS END=219508090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr2 219508091 . T . PASS END=219508091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:24,0 chr2 219508092 . G . PASS END=219508092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,903:0,57,255:23,0 chr2 219508093 . C . PASS END=219508095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,1023:0,63,255:25,0 chr2 219508096 . C . PASS END=219508097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:27,0 chr2 219508098 . T . PASS END=219508098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1072:0,57,255:27,0 chr2 219508099 . T . PASS END=219508099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219508100 . C . PASS END=219508103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,1015:0,73,255:26,0 chr2 219508104 . C . PASS END=219508104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219508105 . A . PASS END=219508106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,866:0,67,255:26,0 chr2 219508107 . G . PASS END=219508107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219508108 . T . PASS END=219508108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,900:0,51,255:25,0 chr2 219508109 . G . PASS END=219508112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:77:27:0,77,1078:0,77,255:29,0 chr2 219508113 . G . PASS END=219508117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:33:0,85,1110:0,85,255:32,0 chr2 219508118 . T . PASS END=219508118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1180:0,71,255:30,0 chr2 219508119 . A . PASS END=219508126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1042:0,82,255:30,0 chr2 219508127 . G . PASS END=219508127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1013:0,46,255:26,0 chr2 219508128 . C . PASS END=219508128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1084:0,63,255:28,0 chr2 219508129 . C . PASS END=219508132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1093:0,80,255:28,0 chr2 219508133 . A . PASS END=219508133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:28,0 chr2 219508134 . A . PASS END=219508138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 219508139 . G . PASS END=219508139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 219508140 . G . PASS END=219508140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:46:32:0,46,1029:0,46,255:27,0 chr2 219508141 . A . PASS END=219508141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 219508142 . A . PASS END=219508142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1037:0,60,255:27,0 chr2 219508143 . T . PASS END=219508147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1180:0,83,255:30,0 chr2 219508148 . A . PASS END=219508148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:29,0 chr2 219508149 . G . PASS END=219508155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:33:0,90,1280:0,92,255:34,0 chr2 219508156 . C . PASS END=219508156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1333:0,73,255:34,0 chr2 219508157 . A . PASS END=219508167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1274:0,89,255:34,0 chr2 219508168 . C . PASS END=219508168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1227:0,69,255:32,0 chr2 219508169 . C . PASS END=219508246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:90:34:0,90,1324:0,92,255:37,0 chr2 219508247 . T . PASS END=219508247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1372:0,78,255:37,0 chr2 219508248 . C . PASS END=219508259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:38:0,90,1350:0,98,255:38,0 chr2 219508260 . C . PASS END=219508260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1313:0,65,255:30,0 chr2 219508261 . G . PASS END=219508382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:32:0,83,1126:0,83,255:40,0 chr2 219508383 . T . PASS END=219508383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1178:0,61,255:28,0 chr2 219508384 . G . PASS END=219508398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:29:0,80,1149:0,80,255:31,0 chr2 219508399 . C . PASS END=219508399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 219508400 . T . PASS END=219508415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1155:0,80,255:31,0 chr2 219508416 . A . PASS END=219508417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:30,0 chr2 219508418 . C . PASS END=219508469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:32,0 chr2 219508470 . A . PASS END=219508470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr2 219508471 . C . PASS END=219508483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1057:0,87,255:29,0 chr2 219508484 . C . PASS END=219508484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 219508485 . T . PASS END=219508488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1108:0,87,255:29,0 chr2 219508489 . G . PASS END=219508490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 219508491 . C . PASS END=219508507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1041:0,84,255:29,0 chr2 219508508 . C . PASS END=219508535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,815:0,66,255:25,0 chr2 219508536 . T . PASS END=219508557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:18:0,42,630:0,54,255:19,0 chr2 219508558 . C . PASS END=219508558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 219508559 . T . PASS END=219508569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 219508570 . G . PASS END=219508585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 219508586 . G . PASS END=219508586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 219508587 . G . PASS END=219508587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219508588 . T . PASS END=219508597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:13:0,27,405:0,39,255:9,0 chr2 219508598 . G . PASS END=219508627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:13,0 chr2 219508628 . A . PASS END=219508628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 219508629 . C . PASS END=219508647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 219508648 . T . PASS END=219508648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,413:0,25,255:12,0 chr2 219508649 . C . PASS END=219508668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:17,0 chr2 219508669 . G . PASS END=219508679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr2 219508680 . C . PASS END=219508680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,668:0,43,255:19,0 chr2 219508681 . A . PASS END=219508695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,753:0,60,255:25,0 chr2 219508696 . T . PASS END=219508696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 219508697 . C . PASS END=219508707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,925:0,75,255:25,0 chr2 219508708 . A . PASS END=219508708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 219508709 . T . PASS END=219508718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,939:0,75,255:26,0 chr2 219508719 . G . PASS END=219508805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1062:0,83,255:37,0 chr2 219508806 . G . PASS END=219508806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:26,0 chr2 219508807 . T . PASS END=219508808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:27,0 chr2 219508809 . C . PASS END=219508814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 219508815 . C . PASS END=219508844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 219508845 . A . PASS END=219508845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:27,0 chr2 219508846 . G . PASS END=219508852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1133:0,82,255:30,0 chr2 219508853 . G . PASS END=219508853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 219508854 . G . PASS END=219508864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 219508865 . C . PASS END=219508865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 219508866 . T . PASS END=219508880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1019:0,87,255:29,0 chr2 219508881 . A . PASS END=219508881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:28,0 chr2 219508882 . G . PASS END=219508887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1080:0,87,255:29,0 chr2 219508888 . T . PASS END=219508889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 219508890 . G . PASS END=219508891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219508892 . A . PASS END=219508892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219508893 . G . PASS END=219508893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,996:0,59,255:26,0 chr2 219508894 . G . PASS END=219508894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 219508895 . T . PASS END=219508895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 219508896 . T . PASS END=219508903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 219508904 . A . PASS END=219508904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219508905 . G . PASS END=219508911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 219508912 . G . PASS END=219508912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 219508913 . G . PASS END=219508932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:30,0 chr2 219508933 . G . PASS END=219508950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:27:0,60,900:0,71,255:26,0 chr2 219508951 . G . PASS END=219508981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,853:0,66,255:23,0 chr2 219508982 . C . PASS END=219508982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 219508983 . A . PASS END=219508983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219508984 . G . PASS END=219508985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219508986 . A . PASS END=219508987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219508988 . T C, 116.22 PASS DP=24;MQ=250.00;FractionInformativeReads=0.958 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,13,0:0,10,0:66:154,69,0,892,69,892:255,69,0:0,0:1.1622e+02,6.6224e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,11:0,0,12,11 chr2 219508989 . C . PASS END=219509005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,778:0,66,255:22,0 chr2 219509006 . T . PASS END=219509006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 219509007 . A . PASS END=219509018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,884:0,69,255:23,0 chr2 219509019 . A . PASS END=219509019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 219509020 . G . PASS END=219509021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219509022 . T . PASS END=219509023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:50:22:0,50,759:0,50,255:20,0 chr2 219509024 . G . PASS END=219509025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 219509026 . T . PASS END=219509027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219509028 . T . PASS END=219509028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr2 219509029 . G . PASS END=219509030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 219509031 . T . PASS END=219509031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 219509032 . C . PASS END=219509039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 219509040 . T . PASS END=219509041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219509042 . C . PASS END=219509043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 219509044 . T . PASS END=219509044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 219509045 . C . PASS END=219509056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:21,0 chr2 219509057 . G . PASS END=219509066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 219509067 . C . PASS END=219509070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219509071 . A . PASS END=219509072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219509073 . C . PASS END=219509122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,64,255:26,0 chr2 219509123 . A . PASS END=219509135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1064:0,84,255:30,0 chr2 219509136 . T . PASS END=219509136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 219509137 . C . PASS END=219509192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr2 219509193 . A . PASS END=219509193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:30,0 chr2 219509194 . C . PASS END=219509199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:32:0,96,1174:0,96,255:32,0 chr2 219509200 . C . PASS END=219509200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1149:0,65,255:31,0 chr2 219509201 . C . PASS END=219509245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1095:0,80,255:33,0 chr2 219509246 . T . PASS END=219509246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1209:0,66,255:29,0 chr2 219509247 . G . PASS END=219509251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:32:0,87,1187:0,88,255:30,0 chr2 219509252 . C . PASS END=219509252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 219509253 . C . PASS END=219509255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219509256 . C . PASS END=219509256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 219509257 . T . PASS END=219509257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219509258 . C . PASS END=219509259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1019:0,73,255:28,0 chr2 219509260 . C . PASS END=219509261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 219509262 . C . PASS END=219509262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:28,0 chr2 219509263 . A . PASS END=219509289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:30,0 chr2 219509290 . G . PASS END=219509310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:25:0,62,945:0,62,255:23,0 chr2 219509311 . T . PASS END=219509311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 219509312 . C . PASS END=219509312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:24,0 chr2 219509313 . G . PASS END=219509313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219509314 . T . PASS END=219509315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr2 219509316 . A . PASS END=219509316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,784:0,20,255:23,0 chr2 219509317 . C . PASS END=219509318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,847:0,44,255:24,0 chr2 219509319 . T . PASS END=219509319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:22,0 chr2 219509320 . G . PASS END=219509320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,867:0,23,255:22,0 chr2 219509321 . G . PASS END=219509333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,868:0,61,255:24,0 chr2 219509334 . G . PASS END=219509334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 219509335 . G . PASS END=219509358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,747:0,62,255:26,0 chr2 219509359 . G . PASS END=219509361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 219509362 . T . PASS END=219509383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,68,255:26,0 chr2 219509384 . G . PASS END=219509384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 219509385 . C . PASS END=219509389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 219509390 . C . PASS END=219509390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 219509391 . C . PASS END=219509400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 219509401 . T . PASS END=219509401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 219509402 . C . PASS END=219509402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 219509403 . C . PASS END=219509403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,762:0,30,255:22,0 chr2 219509404 . T . PASS END=219509410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:24,0 chr2 219509411 . C . PASS END=219509411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:22,0 chr2 219509412 . A . PASS END=219509428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,898:0,62,255:24,0 chr2 219509429 . C . PASS END=219509429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 219509430 . C . PASS END=219509448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,914:0,62,255:26,0 chr2 219509449 . C . PASS END=219509449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219509450 . C . PASS END=219509462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 219509463 . T . PASS END=219509463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:80:27:0,80,836:0,80,255:27,0 chr2 219509464 . T . PASS END=219509468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219509469 . G . PASS END=219509533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1078:0,80,255:35,0 chr2 219509534 . G . PASS END=219509534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1149:0,60,255:29,0 chr2 219509535 . G . PASS END=219509538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 219509539 . T . PASS END=219509539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 219509540 . G . PASS END=219509541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 219509542 . T . PASS END=219509543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1103:0,77,255:31,0 chr2 219509544 . G . PASS END=219509561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1158:0,96,255:32,0 chr2 219509562 . C . PASS END=219509562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:30,0 chr2 219509563 . A . PASS END=219509577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:32:0,93,1158:0,96,255:32,0 chr2 219509578 . C . PASS END=219509578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:29,0 chr2 219509579 . G . PASS END=219509580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr2 219509581 . C . PASS END=219509598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1081:0,82,255:32,0 chr2 219509599 . T . PASS END=219509599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 219509600 . G . PASS END=219509617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1201:0,86,255:33,0 chr2 219509618 . C A, 145.86 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,14,0:0,19,0:96:184,99,0,1241,99,1241:255,99,0:0,0:1.4586e+02,9.5864e+01,0.0000e+00,4.5000e+02,1.3063e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,17:0,0,15,18 chr2 219509619 . C . PASS END=219509620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 219509621 . G . PASS END=219509655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:35:0,90,1350:0,104,255:40,0 chr2 219509656 . T . PASS END=219509720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:33:0,93,1395:0,99,255:40,0 chr2 219509721 . C . PASS END=219509721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr2 219509722 . C . PASS END=219509731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:29,0 chr2 219509732 . G . PASS END=219509733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 219509734 . C . PASS END=219509736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219509737 . C . PASS END=219509740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219509741 . G . PASS END=219509741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219509742 . C . PASS END=219509742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:26,0 chr2 219509743 . T . PASS END=219509756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219509757 . A . PASS END=219509767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,67,255:25,0 chr2 219509768 . A . PASS END=219509777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:25:0,42,720:0,42,255:19,0 chr2 219509778 . G . PASS END=219509778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:17,0 chr2 219509779 . C . PASS END=219509787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:18,0 chr2 219510894 . C . PASS END=219510897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr2 219510898 . G . PASS END=219510906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1017:0,81,255:28,0 chr2 219510907 . C . PASS END=219510907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 219510908 . A . PASS END=219510912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219510913 . T . PASS END=219510913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,984:0,70,255:26,0 chr2 219510914 . T . PASS END=219511022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1260:0,87,255:40,0 chr2 219511023 . A . PASS END=219511023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1266:0,73,255:36,0 chr2 219511024 . C . PASS END=219511066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:31:0,81,1215:0,92,255:39,0 chr2 219511067 . C . PASS END=219511070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:72:30:0,72,1080:0,77,255:25,0 chr2 219511071 . C . PASS END=219511071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:24,0 chr2 219513358 . C . PASS END=219513361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,961:0,65,255:26,0 chr2 219513362 . A . PASS END=219513364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:32,0 chr2 219513365 . T . PASS END=219513365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1116:0,44,255:31,0 chr2 219513366 . A . PASS END=219513494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:83:33:0,83,1186:0,83,255:40,0 chr2 219513495 . A . PASS END=219513495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1449:0,76,255:34,0 chr2 219513496 . A . PASS END=219513546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:93:35:0,93,1395:0,105,255:36,0 chr2 219513547 . T . PASS END=219513547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1233:0,66,255:32,0 chr2 219513548 . G . PASS END=219513636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1243:0,86,255:37,0 chr2 219513637 . C . PASS END=219513637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1247:0,53,255:33,0 chr2 219513638 . T . PASS END=219513702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1186:0,83,255:36,0 chr2 219513703 . T . PASS END=219513719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,869:0,65,255:26,0 chr2 219513720 . A . PASS END=219513722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219513723 . A . PASS END=219513744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,984:0,65,255:26,0 chr2 219513745 . C . PASS END=219513745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:22,0 chr2 219513746 . A . PASS END=219513747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 219513748 . A . PASS END=219513748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,795:0,58,255:20,0 chr2 219513749 . G . PASS END=219513785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,853:0,69,255:23,0 chr2 219513786 . T . PASS END=219513786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:16,0 chr2 219513787 . C . PASS END=219513793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219513794 . G . PASS END=219513796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 219513797 . T . PASS END=219513797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 219513798 . G . PASS END=219513810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,753:0,60,255:24,0 chr2 219513811 . T . PASS END=219513811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 219513812 . C . PASS END=219513818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219513819 . T . PASS END=219513819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 219513820 . G . PASS END=219513820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219513821 . C . PASS END=219513821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,762:0,55,255:20,0 chr2 219513822 . T . PASS END=219513823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:23,0 chr2 219513824 . C . PASS END=219513824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,894:0,50,255:22,0 chr2 219513825 . T . PASS END=219513837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,1030:0,68,255:25,0 chr2 219513838 . T . PASS END=219513838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr2 219513839 . G . PASS END=219513910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,868:0,62,255:26,0 chr2 219513911 . G . PASS END=219513921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 219513922 . G . PASS END=219513925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219513926 . G . PASS END=219513939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219513940 . T . PASS END=219513940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219513941 . C . PASS END=219513962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 219513963 . A . PASS END=219513970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr2 219513971 . G . PASS END=219513988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1186:0,83,255:31,0 chr2 219513989 . C . PASS END=219513989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr2 219513990 . A . PASS END=219513992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 219513993 . T . PASS END=219513993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 219513994 . C . PASS END=219514026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1170:0,93,255:32,0 chr2 219514027 . T . PASS END=219514032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 219514033 . A . PASS END=219514034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219514035 . A . PASS END=219514035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1003:0,73,255:27,0 chr2 219514036 . A . PASS END=219514047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219514048 . T . PASS END=219514051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 219514052 . G . PASS END=219514052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:23,0 chr2 219514053 . C . PASS END=219514072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,954:0,78,255:26,0 chr2 219514073 . G . PASS END=219514076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 219514077 . T . PASS END=219514080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219514081 . G . PASS END=219514081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219514082 . A . PASS END=219514082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:25,0 chr2 219514083 . T . PASS END=219514106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1078:0,87,255:30,0 chr2 219514107 . C . PASS END=219514110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219514111 . T . PASS END=219514113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219514114 . T . PASS END=219514151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:26,0 chr2 219514152 . A . PASS END=219514182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,46,255:19,0 chr2 219515082 . C . PASS END=219515083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 219515084 . T . PASS END=219515084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,945:0,50,255:25,0 chr2 219515085 . C . PASS END=219515110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1056:0,87,255:37,0 chr2 219515111 . T . PASS END=219515111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1294:0,78,255:35,0 chr2 219515112 . C . PASS END=219515211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:36:0,80,1404:0,80,255:40,0 chr2 219515212 . C . PASS END=219515212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:33,0 chr2 219515213 . T . PASS END=219515213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 219515214 . G . PASS END=219515214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr2 219515215 . T . PASS END=219515227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:33:0,81,1215:0,86,255:33,0 chr2 219515228 . T . PASS END=219515246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,876:0,61,255:26,0 chr2 219515247 . G . PASS END=219515249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:54:24:0,54,807:0,55,255:18,0 chr2 219516424 . C . PASS END=219516443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,884:0,62,255:26,0 chr2 219516444 . G . PASS END=219516445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 219516446 . A . PASS END=219516471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,941:0,65,255:26,0 chr2 219516472 . C . PASS END=219516475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219516476 . T . PASS END=219516512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,762:0,63,255:26,0 chr2 219516513 . A . PASS END=219516513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,654:0,32,255:19,0 chr2 219516514 . G . PASS END=219516514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219516515 . T . PASS END=219516534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,601:0,41,255:18,0 chr2 219516535 . A . PASS END=219516541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:37:16:0,37,585:0,37,255:13,0 chr2 219516542 . G . PASS END=219516545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 219516546 . C . PASS END=219516547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr2 219516548 . G . PASS END=219516561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:18,0 chr2 219516562 . A . PASS END=219516562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:16,0 chr2 219516563 . A . PASS END=219516573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:19:0,45,675:0,57,255:18,0 chr2 219516574 . G . PASS END=219516574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:15,0 chr2 219516575 . G . PASS END=219516623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,568:0,46,255:19,0 chr2 219516624 . A . PASS END=219516624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219516625 . A . PASS END=219516625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 219516626 . A . PASS END=219516629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 219516630 . C . PASS END=219516630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:21,0 chr2 219516631 . A . PASS END=219516639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,990:0,69,255:26,0 chr2 219516640 . G . PASS END=219516646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:28,0 chr2 219516647 . T . PASS END=219516647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 219516648 . C . PASS END=219516653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:30,0 chr2 219516654 . G . PASS END=219516654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 219516655 . T . PASS END=219516668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1147:0,87,255:30,0 chr2 219516669 . T . PASS END=219516669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:29,0 chr2 219516670 . G . PASS END=219516704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1140:0,80,255:33,0 chr2 219516705 . C . PASS END=219516705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 219516706 . A . PASS END=219516709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 219516710 . A . PASS END=219516711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 219516712 . A . PASS END=219516715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1066:0,90,255:30,0 chr2 219516716 . T . PASS END=219516716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:29,0 chr2 219516717 . G . PASS END=219516717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 219516718 . G . PASS END=219516725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219516726 . A . PASS END=219516727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219516728 . G . PASS END=219516731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 219516732 . T . PASS END=219516734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219516735 . G . PASS END=219516735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1041:0,51,255:26,0 chr2 219516736 . G . PASS END=219516750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 219516751 . T . PASS END=219516751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219516752 . C . PASS END=219516752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219516753 . T . PASS END=219516753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 219516754 . T . PASS END=219516756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219516757 . A . PASS END=219516761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:26,0 chr2 219516762 . C . PASS END=219516762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,892:0,51,255:23,0 chr2 219516763 . T . PASS END=219516771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,65,255:23,0 chr2 219516772 . C . PASS END=219516772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:20,0 chr2 219516773 . C . PASS END=219516773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 219516774 . T . PASS END=219516787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,532:0,40,255:19,0 chr2 219516788 . C . PASS END=219516791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 219516792 . T . PASS END=219516798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219516799 . A . PASS END=219516801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219516802 . C . PASS END=219516812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:20:0,45,675:0,60,255:18,0 chr2 219516813 . A . PASS END=219516813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:14,0 chr2 219516814 . G . PASS END=219516821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr2 219516822 . A . PASS END=219516849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,31,255:13,0 chr2 219516850 . C . PASS END=219516850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 219516851 . A . PASS END=219516852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219516853 . G . PASS END=219516873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 219516874 . G . PASS END=219516876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219516877 . G . PASS END=219516883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 219516884 . A . PASS END=219516884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219516885 . G . PASS END=219516918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,665:0,41,255:19,0 chr2 219516919 . G . PASS END=219516925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 219516926 . G . PASS END=219516926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 219516927 . G . PASS END=219516931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 219516932 . A . PASS END=219516932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 219516933 . C . PASS END=219516934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 219516935 . G . PASS END=219516935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 219516936 . C . PASS END=219516968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr2 219516969 . A . PASS END=219516970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219516971 . G . PASS END=219516973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219516974 . C . PASS END=219516996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,675:0,44,255:19,0 chr2 219516997 . A . PASS END=219516998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 219516999 . A . PASS END=219516999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 219517000 . C . PASS END=219517000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 219517001 . C . PASS END=219517002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 219517003 . C . PASS END=219517003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 219517004 . C . PASS END=219517019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,528:0,48,255:16,0 chr2 219517020 . A . PASS END=219517020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 219517021 . C . PASS END=219517021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 219517022 . A . PASS END=219517022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 219517023 . C . PASS END=219517023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 219520805 . T . PASS END=219521141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:32:0,80,1169:0,80,255:40,0 chr2 219521142 . G . PASS END=219521148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,80,255:26,0 chr2 219521149 . T . PASS END=219521149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:22,0 chr2 219521150 . C . PASS END=219521152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:28:0,69,1035:0,71,255:23,0 chr2 219524431 . G . PASS END=219524431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 219524463 . G . PASS END=219524463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 219524467 . G . PASS END=219524468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 219524854 . C . PASS END=219524854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:54:0,120,1800:0,162,255:40,0 chr2 219524871 . A . PASS END=219524871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 219524891 . T . PASS END=219524891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 219524924 . T . PASS END=219524924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 219525123 . T . PASS END=219525123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 219525650 . C . PASS END=219525650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 219525668 . G . PASS END=219525668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:55:0,120,1800:0,149,255:40,0 chr2 219525697 . G . PASS END=219525697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 219525711 . A . PASS END=219525969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1305:0,88,255:40,0 chr2 219525970 . A . PASS END=219525970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:28,0 chr2 219525971 . G . PASS END=219525977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:86:32:0,86,1193:0,86,255:30,0 chr2 219525978 . C . PASS END=219525978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 219525979 . G . PASS END=219525984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 219525985 . C . PASS END=219525985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1091:0,60,255:26,0 chr2 219525986 . C . PASS END=219525986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219525987 . A . PASS END=219525987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 219525988 . C . PASS END=219525989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219525990 . A . PASS END=219525990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 219525991 . A . PASS END=219525991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:27,0 chr2 219525992 . G . PASS END=219525992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219525993 . T . PASS END=219525993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,824:0,73,255:27,0 chr2 219525994 . T . PASS END=219525997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219525998 . A . PASS END=219525999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:57:30:0,57,993:0,57,255:27,0 chr2 219526000 . T . PASS END=219526009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:25,0 chr2 219526010 . C . PASS END=219526012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1194:0,83,255:31,0 chr2 219526013 . T . PASS END=219526013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1086:0,66,255:29,0 chr2 219526014 . G . PASS END=219526017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1192:0,83,255:32,0 chr2 219526018 . A . PASS END=219526018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1156:0,60,255:30,0 chr2 219526019 . C . PASS END=219526031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1166:0,85,255:33,0 chr2 219526117 . G . PASS END=219526117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 219526129 . G . PASS END=219526270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:39:0,81,1215:0,104,255:40,0 chr2 219526482 . C . PASS END=219526483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:32:0,93,1395:0,96,255:32,0 chr2 219526484 . C . PASS END=219526484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1103:0,65,255:31,0 chr2 219526485 . G . PASS END=219526651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1030:0,80,255:40,0 chr2 219526652 . A . PASS END=219526652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1131:0,69,255:31,0 chr2 219526653 . A . PASS END=219526663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:33,0 chr2 219526664 . T . PASS END=219526673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:29:0,66,990:0,86,255:26,0 chr2 219526674 . G . PASS END=219526676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:45:28:0,45,978:0,45,255:22,0 chr2 219526677 . G . PASS END=219526678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:22,0 chr2 219526920 . G . PASS END=219526983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:52:0,120,1800:0,156,255:40,0 chr2 219527233 . C . PASS END=219527397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:32:0,81,1215:0,96,255:40,0 chr2 219527398 . G . PASS END=219527402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,99,255:26,0 chr2 219527403 . G . PASS END=219527403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 219527606 . A . PASS END=219527646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:36:0,81,1258:0,81,255:40,0 chr2 219527647 . G . PASS END=219527647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1382:0,71,255:39,0 chr2 219527648 . G . PASS END=219527723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:39:0,100,1224:0,100,255:40,0 chr2 219527857 . G . PASS END=219527867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 219527868 . C . PASS END=219527868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:24,0 chr2 219527869 . C . PASS END=219527881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1000:0,70,255:26,0 chr2 219527882 . G . PASS END=219527942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:31,0 chr2 219527943 . T . PASS END=219527943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 219527944 . C . PASS END=219528010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1035:0,80,255:33,0 chr2 219528011 . A . PASS END=219528013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219528014 . A . PASS END=219528014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219528015 . A . PASS END=219528016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:76:31:0,76,1048:0,76,255:26,0 chr2 219528017 . C . PASS END=219528024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:31,0 chr2 219528025 . T . PASS END=219528025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:29,0 chr2 219528026 . C . PASS END=219528026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 219528027 . C . PASS END=219528027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:29,0 chr2 219528028 . T . PASS END=219528029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:29,0 chr2 219528030 . C . PASS END=219528032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:30,0 chr2 219528033 . A . PASS END=219528033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219528034 . G . PASS END=219528037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219528038 . C . PASS END=219528052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:28:0,63,945:0,68,255:25,0 chr2 219528053 . C . PASS END=219528109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,590:0,45,255:18,0 chr2 219528680 . C . PASS END=219528756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:13,0 chr2 219528757 . G . PASS END=219528759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 219528760 . G . PASS END=219528783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 219528784 . G . PASS END=219528798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:9:0,21,315:0,27,255:9,0 chr2 219528799 . C . PASS END=219528804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:12,0 chr2 219528805 . G . PASS END=219528805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 219528806 . A . PASS END=219528817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr2 219528818 . A . PASS END=219528820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219528821 . C . PASS END=219528822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 219528823 . T . PASS END=219528823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:9,0 chr2 219528824 . G . PASS END=219528826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 219528827 . G . PASS END=219528833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 219528834 . G . PASS END=219528834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 219528835 . G . PASS END=219528838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,620:0,48,255:16,0 chr2 219528839 . C . PASS END=219528840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 219528841 . G . PASS END=219528852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 219528853 . G . PASS END=219528853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 219528854 . C . PASS END=219528860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,553:0,48,255:17,0 chr2 219528861 . T . PASS END=219528861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,527:0,12,255:16,0 chr2 219528862 . C . PASS END=219528862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 219528863 . T . PASS END=219528863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 219528864 . T . PASS END=219528866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:17,0 chr2 219528867 . G . PASS END=219528867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 219528868 . G . PASS END=219528874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr2 219528875 . T . PASS END=219528875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 219528876 . T . PASS END=219528878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 219528879 . A . PASS END=219528879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 219528880 . C . PASS END=219528885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,621:0,51,255:17,0 chr2 219528886 . G . PASS END=219528886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 219528887 . G . PASS END=219528899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 219528900 . G . PASS END=219528900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 219528901 . G . PASS END=219528903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 219528904 . T . PASS END=219528904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 219528905 . T . PASS END=219528919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 219528920 . C . PASS END=219528920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 219528921 . T . PASS END=219528937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,612:0,48,255:16,0 chr2 219528938 . A . PASS END=219528938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 219528939 . G . PASS END=219528939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,557:0,21,255:13,0 chr2 219528940 . G . PASS END=219528949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,682:0,44,255:19,0 chr2 219528950 . C . PASS END=219528950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 219528951 . T . PASS END=219528951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr2 219528952 . G . PASS END=219528960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,739:0,60,255:22,0 chr2 219528961 . G . PASS END=219528961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:18,0 chr2 219528962 . G . PASS END=219528965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr2 219528966 . C . PASS END=219528988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,872:0,64,255:25,0 chr2 219528989 . T . PASS END=219528989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 219528990 . C . PASS END=219528997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 219528998 . G . PASS END=219528998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219528999 . T . PASS END=219528999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 219529000 . G . PASS END=219529004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:31,0 chr2 219529005 . C . PASS END=219529005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1100:0,55,255:29,0 chr2 219529006 . G . PASS END=219529006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 219529007 . T . PASS END=219529258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:31:0,83,1172:0,83,255:40,0 chr2 219529462 . C . PASS END=219529560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,115,1545:0,115,255:40,0 chr2 219529561 . C . PASS END=219529561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1268:0,76,255:38,0 chr2 219529562 . T . PASS END=219529580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:89:38:0,89,1350:0,89,255:40,0 chr2 219529581 . T . PASS END=219529594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,990:0,66,255:25,0 chr2 219529595 . T . PASS END=219529595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:23,0 chr2 219529596 . C . PASS END=219529596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 219529878 . C . PASS END=219529970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:89:35:0,89,1282:0,89,255:40,0 chr2 219530639 . C . PASS END=219530643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:26:0,62,914:0,62,255:26,0 chr2 219530644 . T . PASS END=219530649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 219530650 . T . PASS END=219530650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 219530651 . A . PASS END=219530660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 219530661 . C . PASS END=219530661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 219530662 . G . PASS END=219530663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219530664 . T . PASS END=219530680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:24:0,66,876:0,68,255:26,0 chr2 219530681 . T . PASS END=219530685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 219530686 . G . PASS END=219530687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219530688 . G . PASS END=219530698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219530699 . T . PASS END=219530701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219530702 . C . PASS END=219530702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219530703 . T . PASS END=219530703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 219530704 . C . PASS END=219530704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 219530705 . C . PASS END=219530710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:77:29:0,77,1116:0,77,255:26,0 chr2 219530711 . C . PASS END=219530714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219530715 . A . PASS END=219530722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:28:0,74,1108:0,74,255:26,0 chr2 219530723 . A . PASS END=219530734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1023:0,81,255:30,0 chr2 219530735 . G . PASS END=219530735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:28,0 chr2 219530736 . C . PASS END=219530736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219530737 . A . PASS END=219530737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:26,0 chr2 219530738 . G . PASS END=219530754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1169:0,80,255:30,0 chr2 219530755 . A . PASS END=219530756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1027:0,76,255:29,0 chr2 219530757 . G . PASS END=219530782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1127:0,80,255:32,0 chr2 219530882 . C . PASS END=219530953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:54:0,120,1800:0,137,255:40,0 chr2 219532635 . C . PASS END=219532648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 219532649 . A . PASS END=219532649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 219532650 . C . PASS END=219532672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,961:0,65,255:26,0 chr2 219532673 . C . PASS END=219532683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,988:0,84,255:28,0 chr2 219532684 . T . PASS END=219532684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 219532685 . G . PASS END=219532690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219532691 . G . PASS END=219532691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr2 219532692 . C . PASS END=219532692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219532693 . A . PASS END=219532704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,923:0,67,255:26,0 chr2 219532802 . G . PASS END=219532823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,984:0,65,255:26,0 chr2 219532824 . G . PASS END=219532825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 219532826 . C . PASS END=219532854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:24:0,64,931:0,64,255:26,0 chr2 219532855 . C . PASS END=219532855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 219532856 . A . PASS END=219532862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 219532863 . G . PASS END=219532863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 219532864 . G . PASS END=219532869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:25,0 chr2 219532962 . C . PASS END=219532970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,78,255:26,0 chr2 219532971 . G . PASS END=219532980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 219532981 . A . PASS END=219532981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 219532982 . C . PASS END=219533017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1127:0,90,255:32,0 chr2 219533018 . C . PASS END=219533018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 219533019 . T . PASS END=219533021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219533022 . A . PASS END=219533022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 219533023 . G . PASS END=219533033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 219533034 . C . PASS END=219533034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1037:0,57,255:25,0 chr2 219533035 . A . PASS END=219533037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219533038 . G . PASS END=219533039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1100:0,74,255:26,0 chr2 219533040 . G . PASS END=219533040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,975:0,51,255:23,0 chr2 219533041 . A . PASS END=219533045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,992:0,68,255:25,0 chr2 219533046 . G . PASS END=219533046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:24,0 chr2 219533047 . A . PASS END=219533049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:24,0 chr2 219533050 . T . PASS END=219533050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:21,0 chr2 219533051 . C . PASS END=219533052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 219533053 . C . PASS END=219533053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 219533054 . A . PASS END=219533058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:22,0 chr2 219533059 . G . PASS END=219533059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,820:0,39,255:20,0 chr2 219533060 . A . PASS END=219533064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 219533328 . C . PASS END=219533402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:73:0,120,1800:0,184,255:40,0 chr2 219536653 . C . PASS END=219536693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:33:0,87,1266:0,91,255:36,0 chr2 219537553 . A . PASS END=219537593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:98:39:0,98,1363:0,98,255:40,2 chr2 219537594 . T . PASS END=219537594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:72:47:0,72,1629:0,72,255:40,2 chr2 219537595 . T . PASS END=219537636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:38:0,83,1260:0,83,255:40,0 chr2 219538348 . G . PASS END=219538467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:33:0,84,1202:0,84,255:40,0 chr2 219538468 . A . PASS END=219538468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1181:0,56,255:35,0 chr2 219538469 . G . PASS END=219538472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1365:0,98,255:38,0 chr2 219538473 . T . PASS END=219538473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1319:0,75,255:37,0 chr2 219538474 . G . PASS END=219538474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1451:0,114,255:38,0 chr2 219538475 . A . PASS END=219538475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:37,0 chr2 219538476 . A . PASS END=219538476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,102,1530:0,114,255:34,0 chr2 219538477 . A . PASS END=219538477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:37:38:0,37,1286:0,37,255:32,0 chr2 219538478 . C . PASS END=219538488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:39:0,90,1350:0,106,255:34,0 chr2 219538602 . G . PASS END=219538679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:46:0,111,1706:0,111,255:40,0 chr2 219540066 . G . PASS END=219540070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1003:0,84,255:28,0 chr2 219540071 . G . PASS END=219540077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219540078 . G . PASS END=219540086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:31,0 chr2 219540087 . T . PASS END=219540087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,981:0,79,255:30,0 chr2 219540088 . T . PASS END=219540177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:90:32:0,90,1395:0,90,255:40,0 chr2 219540178 . T . PASS END=219540179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1400:0,68,255:35,0 chr2 219540180 . A . PASS END=219540183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:87:40:0,87,1394:0,87,255:37,0 chr2 219540184 . T . PASS END=219540184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1203:0,78,255:33,0 chr2 219540185 . C . PASS END=219540185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:47:37:0,47,1165:0,47,255:32,0 chr2 219540186 . T . PASS END=219540190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:37:0,94,1252:0,94,255:35,0 chr2 219540191 . C . PASS END=219540191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1182:0,78,255:33,0 chr2 219540192 . T . PASS END=219540193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1189:0,88,255:34,0 chr2 219540194 . T . PASS END=219540196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1225:0,89,255:31,0 chr2 219540752 . A . PASS END=219540753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,649:0,41,255:18,0 chr2 219540754 . T . PASS END=219540754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,574:0,2,255:16,0 chr2 219540755 . T . PASS END=219540759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,605:0,40,255:18,0 chr2 219540760 . G . PASS END=219540760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:15,0 chr2 219540761 . G . PASS END=219540762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 219540763 . C . PASS END=219540763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,529:0,15,255:15,0 chr2 219540764 . T . PASS END=219540764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:15,0 chr2 219540765 . A . PASS END=219540765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:14,0 chr2 219540766 . T . PASS END=219540767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,637:0,40,255:17,0 chr2 219540768 . A . PASS END=219540768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:9:19:0,9,468:0,9,255:16,0 chr2 219540769 . G . PASS END=219540769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,590:0,40,255:17,0 chr2 219540770 . C . PASS END=219540771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 219540772 . C . PASS END=219540772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 219540773 . C . PASS END=219540773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,782:0,39,255:22,0 chr2 219540774 . A . PASS END=219540774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:3:24:0,3,775:0,3,255:22,0 chr2 219540775 . A . PASS END=219540776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,931:0,67,255:27,0 chr2 219540777 . A . PASS END=219540777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:34:28:0,34,859:0,34,255:25,0 chr2 219540778 . C . PASS END=219540778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr2 219540779 . A . PASS END=219540779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:27,0 chr2 219540780 . A . PASS END=219540780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,837:0,12,255:25,0 chr2 219540781 . T . PASS END=219540781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1015:0,84,255:28,0 chr2 219540782 . G . PASS END=219540782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219540783 . G . PASS END=219540788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219540789 . A . PASS END=219540789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 219540790 . C . PASS END=219540790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219540791 . A . PASS END=219540791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,936:0,73,255:27,0 chr2 219540792 . T . PASS END=219540793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1040:0,87,255:29,0 chr2 219540794 . C . PASS END=219540794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr2 219540795 . A . PASS END=219540795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,937:0,54,255:27,0 chr2 219540796 . T . PASS END=219540797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 219540798 . A . PASS END=219540798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 219540799 . A . PASS END=219540800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,3:31:43:31:0,43,818:0,43,255:30,0 chr2 219540801 . G . PASS END=219540801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 219540802 . G . PASS END=219540802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:45:31:0,45,943:0,45,255:29,0 chr2 219540803 . C . PASS END=219540804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1105:0,93,255:31,0 chr2 219540805 . C . PASS END=219540805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 219540806 . A . PASS END=219540965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:83:31:0,83,1180:0,83,255:40,0 chr2 219540966 . G . PASS END=219540970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:33:0,60,1149:0,60,255:26,0 chr2 219540971 . C . PASS END=219540974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:27,0 chr2 219540975 . C . PASS END=219540990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:64:26:0,64,931:0,64,255:26,0 chr2 219540991 . C . PASS END=219540991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 219540992 . C . PASS END=219540992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 219540993 . T . PASS END=219540993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 219540994 . G . PASS END=219540997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 219540998 . T . PASS END=219540998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 219540999 . A . PASS END=219541001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219543891 . A . PASS END=219543900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1226:0,102,255:35,0 chr2 219543901 . A . PASS END=219543901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1257:0,66,255:34,0 chr2 219543902 . G . PASS END=219543984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:96:36:0,96,1352:0,107,255:40,0 chr2 219544283 . T . PASS END=219544302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,335:0,30,255:13,0 chr2 219544303 . C . PASS END=219544320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:16,0 chr2 219544321 . T . PASS END=219544322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 219544323 . C . PASS END=219544415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,588:0,41,255:19,0 chr2 219544416 . G . PASS END=219544420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 219544421 . A . PASS END=219544427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 219544428 . C . PASS END=219544452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 219544616 . A . PASS END=219544620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219544621 . T . PASS END=219544623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219544624 . G . PASS END=219544664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1162:0,84,255:31,0 chr2 219544665 . A . PASS END=219544665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:28,0 chr2 219544666 . G . PASS END=219544756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:80:31:0,80,1147:0,80,255:36,0 chr2 219544757 . A . PASS END=219544757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 219544758 . G . PASS END=219544763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 219544764 . G . PASS END=219544764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:25,0 chr2 219544765 . G . PASS END=219544765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219544766 . G . PASS END=219544769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219544770 . A . PASS END=219544770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 219544771 . A . PASS END=219544775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219544776 . G . PASS END=219544776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 219544777 . G . PASS END=219544778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 219544779 . C . PASS END=219544789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,81,255:25,0 chr2 219544790 . C . PASS END=219544803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:20:0,51,765:0,60,255:19,0 chr2 219545326 . G . PASS END=219545333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:39:0,91,1467:0,91,255:40,0 chr2 219545334 . G . PASS END=219545334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1418:0,57,255:40,0 chr2 219545335 . G . PASS END=219545405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:44:0,96,1623:0,96,255:40,0 chr2 219545406 . T . PASS END=219545406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1398:0,71,255:37,0 chr2 219545407 . A . PASS END=219545425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,101,1418:0,101,255:39,0 chr2 219549808 . G . PASS END=219549951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:86:33:0,86,1233:0,86,255:40,0 chr2 219553114 . G . PASS END=219553121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,815:0,69,255:24,0 chr2 219553122 . C . PASS END=219553122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 219553123 . T . PASS END=219553135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,870:0,72,255:24,0 chr2 219553136 . G . PASS END=219553136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,754:0,42,255:21,0 chr2 219553137 . A . PASS END=219553137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219553138 . G . PASS END=219553138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,570:0,22,255:20,0 chr2 219553139 . C . PASS END=219553139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219553140 . A . PASS END=219553141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:53:23:0,53,778:0,53,255:23,0 chr2 219553142 . A . PASS END=219553143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 219553144 . G . PASS END=219553144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,786:0,55,255:23,0 chr2 219553145 . G . PASS END=219553155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,803:0,72,255:24,0 chr2 219553156 . T . PASS END=219553156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 219553157 . A . PASS END=219553158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:25,0 chr2 219553420 . A . PASS END=219553570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:80:30:0,80,1164:0,80,255:40,0 chr2 219553571 . A . PASS END=219553576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:25,0 chr2 219553577 . A . PASS END=219553586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:23:0,42,630:0,69,255:19,0 chr2 219553587 . C . PASS END=219553587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:39:21:0,39,585:0,63,255:13,0 chr2 219553588 . A . PASS END=219553597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:15,0 chr2 219553598 . A . PASS END=219553599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 219554582 . C . PASS END=219554679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:87:35:0,87,1273:0,88,255:40,0 chr2 219555173 . C . PASS END=219555278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:93:44:0,93,1395:0,116,255:40,0 chr2 219556866 . T . PASS END=219557013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:84:36:0,84,1260:0,108,255:40,0 chr2 219557014 . A . PASS END=219557016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:36:0,75,1125:0,92,255:26,0 chr2 219557306 . G . PASS END=219557318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,856:0,72,255:25,0 chr2 219557319 . G . PASS END=219557319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 219557320 . A . PASS END=219557321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:25:0,65,917:0,65,255:26,0 chr2 219557322 . C . PASS END=219557322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:26,0 chr2 219557323 . C . PASS END=219557326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219557327 . C . PASS END=219557327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219557328 . A . PASS END=219557329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:28:0,74,1070:0,74,255:27,0 chr2 219557330 . T . PASS END=219557364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:31:0,83,1202:0,83,255:36,0 chr2 219557365 . T . PASS END=219557365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1266:0,77,255:35,0 chr2 219557366 . C . PASS END=219557393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:32:0,90,1266:0,91,255:36,0 chr2 219557394 . T . PASS END=219557403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,86,255:26,0 chr2 219557404 . C . PASS END=219557406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 219557407 . C . PASS END=219557426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,947:0,65,255:26,0 chr2 219557427 . G . PASS END=219557427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 219557428 . G . PASS END=219557433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 219557963 . G . PASS END=219558014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:82:40:0,82,1415:0,82,255:40,0 chr2 219558015 . C . LowGQ END=219558015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,6:44:0:44:0,0,1233:18,0,255:36,0 chr2 219558016 . A . PASS END=219558016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:52:45:0,52,1319:0,52,255:38,0 chr2 219558017 . T . PASS END=219558017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 219558018 . C . PASS END=219558018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,4:45:32:45:0,32,1352:0,32,255:39,0 chr2 219558019 . C . PASS END=219558062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,82,255:40,0 chr2 219558063 . T . PASS END=219558067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 219558446 . G . PASS END=219558446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,988:0,84,255:28,0 chr2 219558447 . T . PASS END=219558447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 219558448 . T . PASS END=219558451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 219558452 . T . PASS END=219558452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 219558453 . A . PASS END=219558544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1154:0,83,255:35,0 chr2 219558618 . G . PASS END=219558706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:42:0,105,1710:0,105,255:40,0 chr2 219558987 . A . PASS END=219559050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:49:0,120,1800:0,140,255:40,0 chr2 219559248 . A . PASS END=219559248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1008:0,78,255:26,0 chr2 219559249 . G . PASS END=219559258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:28,0 chr2 219559259 . C . PASS END=219559272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:25:0,75,969:0,75,255:26,0 chr2 219559273 . A . PASS END=219559289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 219559290 . G . PASS END=219559290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:24,0 chr2 219559291 . T . PASS END=219559291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:24,0 chr2 219559292 . G . PASS END=219559327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:20:0,60,745:0,60,255:26,0 chr2 219559328 . A . PASS END=219559350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 219559351 . C . PASS END=219559358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:16:0,33,495:0,48,255:13,0 chr2 219561250 . G . PASS END=219561324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:94:44:0,94,1485:0,94,255:40,0 chr2 219561762 . C . PASS END=219561769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:24:0,66,990:0,72,255:26,0 chr2 219561770 . G . PASS END=219561771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 219561772 . C . PASS END=219561772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:28,0 chr2 219561773 . T . PASS END=219561773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219561774 . A . PASS END=219561774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 219561775 . G . PASS END=219561775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219561776 . C . PASS END=219561776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,967:0,54,255:27,0 chr2 219561777 . C . PASS END=219561777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 219561778 . T . PASS END=219561778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219561779 . A . PASS END=219561779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 219561780 . A . PASS END=219561843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:29:0,82,1080:0,82,255:38,0 chr2 219561844 . G . PASS END=219561844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:34,0 chr2 219561845 . G . PASS END=219561870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:36:0,99,1485:0,107,255:38,0 chr2 219561871 . A . PASS END=219561871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1396:0,76,255:34,0 chr2 219561872 . A . PASS END=219561919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:83:33:0,83,1305:0,83,255:38,0 chr2 219561920 . A . PASS END=219561920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1075:0,60,255:25,0 chr2 219561921 . C . PASS END=219561927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,92,255:29,0 chr2 219561928 . C . PASS END=219561936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:29:0,73,1033:0,73,255:26,0 chr2 219562186 . G . PASS END=219562188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 219562189 . T . PASS END=219562333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,994:0,81,255:40,0 chr2 219562577 . G . PASS END=219562577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219562578 . C . PASS END=219562578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 219562579 . C . PASS END=219562723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:29:0,80,1094:0,80,255:40,0 chr2 219562724 . G . PASS END=219562724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219563325 . G . PASS END=219563518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:90:36:0,90,1174:0,90,255:40,0 chr2 219563519 . G . PASS END=219563525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:75:35:0,75,1125:0,92,255:26,0 chr2 219563526 . C . PASS END=219563541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1025:0,84,255:31,0 chr2 219563542 . T . PASS END=219563542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr2 219563543 . G . PASS END=219563572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1111:0,83,255:32,0 chr2 219563573 . G . PASS END=219563573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:30,0 chr2 219563574 . C . PASS END=219563604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1135:0,80,255:32,0 chr2 219563605 . C . PASS END=219563606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 219563607 . C . PASS END=219563608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 219563609 . G . PASS END=219563609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1003:0,59,255:26,0 chr2 219563610 . C . PASS END=219563612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219563613 . A . PASS END=219563615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 219563616 . C . PASS END=219563623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1133:0,80,255:28,0 chr2 219563624 . C . PASS END=219563629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 219563630 . A . PASS END=219563631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,945:0,51,255:24,0 chr2 219563632 . A . PASS END=219563638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:27:0,67,978:0,67,255:26,0 chr2 219563639 . T . PASS END=219563639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:24,0 chr2 219563640 . G . PASS END=219563648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 219563649 . C . PASS END=219563721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,862:0,61,255:26,0 chr2 219563722 . G . PASS END=219563754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,545:0,48,255:18,0 chr2 219563755 . A . PASS END=219563755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,558:0,34,255:14,0 chr2 219563756 . C . PASS END=219563772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,598:0,48,255:17,0 chr2 219563773 . G . PASS END=219563773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 219563774 . G . PASS END=219563790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr2 219563791 . C . PASS END=219563791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 219563792 . T . PASS END=219563812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,696:0,44,255:19,0 chr2 219563813 . G . PASS END=219563813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219563814 . G . PASS END=219563814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219563815 . C . PASS END=219563830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 219563831 . T . PASS END=219563831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 219563832 . G . PASS END=219563843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219563844 . G . PASS END=219563853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 219563854 . G . PASS END=219563868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,870:0,72,255:24,0 chr2 219563869 . T . PASS END=219563869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:23,0 chr2 219563870 . T . PASS END=219563874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr2 219563875 . A . PASS END=219563875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 219563876 . T . PASS END=219563881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr2 219563882 . G . PASS END=219563945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,989:0,81,255:33,0 chr2 219563946 . G . PASS END=219563946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 219563947 . A . PASS END=219563987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,950:0,81,255:31,0 chr2 219563988 . G . PASS END=219564021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,866:0,62,255:26,0 chr2 219564022 . C . PASS END=219564022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,954:0,45,255:21,0 chr2 219564023 . T . PASS END=219564053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,792:0,63,255:24,0 chr2 219564054 . G . PASS END=219564061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 219564062 . C . PASS END=219564063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 219564064 . T . PASS END=219564071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 219566589 . G . PASS END=219566609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:31,0 chr2 219566610 . A . PASS END=219566610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 219566611 . G . PASS END=219566611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219566612 . T . PASS END=219566612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:30,0 chr2 219566613 . G . PASS END=219566618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 219566619 . C . PASS END=219566619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 219566620 . T . PASS END=219566707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1186:0,83,255:39,0 chr2 219566708 . C . PASS END=219566714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:31:0,72,1080:0,93,255:26,0 chr2 219566715 . C . PASS END=219566732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:48:19:0,48,714:0,57,255:19,0 chr2 219602400 . A . PASS END=219602419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,869:0,66,255:26,0 chr2 219602420 . G . PASS END=219602517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1063:0,80,255:35,0 chr2 219602518 . G . PASS END=219602530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:27:0,69,1125:0,69,255:26,0 chr2 219602531 . G . PASS END=219602536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1102:0,84,255:29,0 chr2 219602537 . T . PASS END=219602537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:26,0 chr2 219602538 . C . PASS END=219602542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1016:0,71,255:26,0 chr2 219602543 . A . PASS END=219602547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219602548 . A . PASS END=219602548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 219602549 . G . PASS END=219602555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1060:0,90,255:31,0 chr2 219602556 . T . PASS END=219602556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 219602557 . G . PASS END=219602563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1097:0,93,255:31,0 chr2 219602564 . G . PASS END=219602573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,1024:0,60,255:26,0 chr2 219602574 . C . PASS END=219602579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219602580 . G . PASS END=219602589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1024:0,71,255:26,0 chr2 219602590 . C . PASS END=219602593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 219602594 . A . PASS END=219602596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:28:0,71,1023:0,71,255:26,0 chr2 219602597 . G . PASS END=219602599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219602600 . G . PASS END=219602601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 219602602 . G . PASS END=219602604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 219602605 . C . PASS END=219602605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:28,0 chr2 219602606 . A . PASS END=219602610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:30,0 chr2 219602611 . T . PASS END=219602611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:27,0 chr2 219602612 . C . PASS END=219602613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 219602614 . T . PASS END=219602614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 219602615 . G . PASS END=219602623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:28,0 chr2 219602624 . A . PASS END=219602624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 219602625 . C . PASS END=219602626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 219602627 . C . PASS END=219602627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 219602628 . C . PASS END=219602628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219602629 . A . PASS END=219602629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 219602630 . G . PASS END=219602640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1078:0,87,255:30,0 chr2 219602641 . T . PASS END=219602641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:28,0 chr2 219602642 . C . PASS END=219602642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1133:0,90,255:30,0 chr2 219602643 . T . PASS END=219602643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:29,0 chr2 219602644 . T . PASS END=219602650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1005:0,90,255:30,0 chr2 219602651 . C . PASS END=219602651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1054:0,74,255:27,0 chr2 219602652 . A . PASS END=219602652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219602653 . G . PASS END=219602665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:28:0,72,1080:0,84,255:26,0 chr2 219602666 . C . PASS END=219602666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219602667 . T . PASS END=219602667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:27,0 chr2 219602668 . C . PASS END=219602669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219602670 . G . PASS END=219602677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:29:0,72,1080:0,87,255:26,0 chr2 219602678 . G . PASS END=219602682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1078:0,84,255:28,0 chr2 219602683 . T . PASS END=219602683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 219602684 . C . PASS END=219602686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219602687 . T . PASS END=219602694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1008:0,68,255:24,0 chr2 219602695 . A . PASS END=219602695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,930:0,51,255:23,0 chr2 219602696 . C . PASS END=219602710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 219602711 . C . PASS END=219602712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,853:0,45,255:22,0 chr2 219602713 . T . PASS END=219602740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:24,0 chr2 219602741 . C . PASS END=219602744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219602745 . C . PASS END=219602763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 219602764 . G . PASS END=219602764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:19,0 chr2 219602765 . C . PASS END=219602788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:22,0 chr2 219602789 . A . PASS END=219602789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:22,0 chr2 219602790 . C . PASS END=219602809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,845:0,69,255:24,0 chr2 219602810 . T . PASS END=219602810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,754:0,55,255:21,0 chr2 219602811 . T . PASS END=219602821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 219602822 . A . PASS END=219602875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,651:0,41,255:19,0 chr2 219602876 . C . PASS END=219602876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr2 219602877 . A . PASS END=219602881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:17,0 chr2 219602882 . G . PASS END=219602882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 219602883 . G . PASS END=219602887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 219602888 . T . PASS END=219602889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 219602890 . C . PASS END=219602901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 219602902 . T . PASS END=219602906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr2 219602907 . A . PASS END=219602907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 219602908 . T . PASS END=219602908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219602909 . G . PASS END=219602914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,620:0,48,255:16,0 chr2 219602915 . G . PASS END=219602920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 219602921 . G . PASS END=219602923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219602924 . C . PASS END=219602924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219602925 . T . PASS END=219602925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 219602926 . C . PASS END=219602929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219602930 . A . PASS END=219602931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219602932 . C . PASS END=219602932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 219602933 . C . PASS END=219602943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:19,0 chr2 219602944 . A . PASS END=219602944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:18,0 chr2 219602945 . C . PASS END=219602947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219602948 . C . PASS END=219602978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,754:0,60,255:26,0 chr2 219602979 . G . PASS END=219602981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1102:0,87,255:29,0 chr2 219602982 . A . PASS END=219602982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:28,0 chr2 219602983 . A . PASS END=219603059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1045:0,83,255:35,0 chr2 219603060 . T . PASS END=219603060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:27,0 chr2 219603061 . C . PASS END=219603068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1117:0,80,255:30,0 chr2 219603069 . T . PASS END=219603069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 219603070 . G . PASS END=219603203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:31:0,82,1038:0,82,255:40,0 chr2 219603204 . A . PASS END=219603204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:31,0 chr2 219603205 . A . PASS END=219603205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1103:0,57,255:31,0 chr2 219603206 . G . PASS END=219603240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1147:0,80,255:37,0 chr2 219603241 . C . PASS END=219603241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1402:0,79,255:33,0 chr2 219603242 . C . PASS END=219603296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:34:0,80,1197:0,80,255:37,0 chr2 219603297 . G . PASS END=219603297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:33,0 chr2 219603298 . T . PASS END=219603312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1294:0,92,255:35,0 chr2 219603313 . A . PASS END=219603313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1362:0,79,255:33,0 chr2 219603314 . T . PASS END=219603488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:38:0,84,1372:0,84,255:40,0 chr2 219603489 . C . PASS END=219603490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:35,0 chr2 219603491 . G . PASS END=219603517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:35,0 chr2 219603518 . C . PASS END=219603518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1325:0,73,255:30,0 chr2 219603519 . A . PASS END=219603557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1249:0,89,255:35,0 chr2 219603558 . C . PASS END=219603558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 219603559 . A . PASS END=219603777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:92:35:0,92,1280:0,92,255:40,0 chr2 219603778 . T . PASS END=219603778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1236:0,73,255:29,0 chr2 219603779 . T . PASS END=219603787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:36:0,90,1350:0,104,255:33,0 chr2 219603788 . C . PASS END=219603788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1333:0,75,255:34,0 chr2 219603789 . A . PASS END=219603801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:92:35:0,92,1296:0,92,255:34,0 chr2 219603802 . G . PASS END=219603802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1132:0,72,255:30,0 chr2 219603803 . C . PASS END=219603806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:94:37:0,94,1115:0,94,255:34,0 chr2 219603807 . T . PASS END=219603807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1247:0,56,255:32,0 chr2 219603808 . C . PASS END=219603837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1215:0,89,255:35,0 chr2 219603838 . A . PASS END=219603865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr2 219603866 . C . PASS END=219603871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 219603872 . T . PASS END=219603874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,753:0,27,255:18,0 chr2 219603875 . T . PASS END=219603886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:15,0 chr2 219604781 . T . PASS END=219604796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:36:0,95,1341:0,95,255:37,0 chr2 219604797 . C . PASS END=219604797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1341:0,75,255:36,0 chr2 219604798 . A . PASS END=219604890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:80:38:0,80,1079:0,80,255:40,0 chr2 219605244 . G . PASS END=219605307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:50:0,116,1800:0,116,255:40,1 chr2 219609812 . A . PASS END=219609956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:51:0,120,1800:0,130,255:40,0 chr2 219610414 . T . PASS END=219610414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 219610415 . G . PASS END=219610415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 219610416 . G . PASS END=219610417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 219610418 . G . PASS END=219610418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 219610419 . A . PASS END=219610419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:38:24:0,38,529:0,38,255:22,0 chr2 219610420 . A . PASS END=219610430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:26,0 chr2 219610431 . G . PASS END=219610431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 219610432 . A . PASS END=219610432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 219610433 . A . PASS END=219610434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr2 219610435 . A . PASS END=219610436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,992:0,68,255:28,0 chr2 219610437 . A . PASS END=219610439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 219610440 . A . PASS END=219610440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:30,0 chr2 219610441 . A . PASS END=219610441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 219610442 . G . PASS END=219610442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 219610443 . T . PASS END=219610447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1156:0,93,255:31,0 chr2 219610448 . C . PASS END=219610448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1083:0,60,255:29,0 chr2 219610449 . C . PASS END=219610450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1141:0,93,255:31,0 chr2 219610451 . A . PASS END=219610451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:30,0 chr2 219610452 . T . PASS END=219610452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219610453 . G . PASS END=219610453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1025:0,76,255:29,0 chr2 219610454 . G . PASS END=219610454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 219610455 . A . PASS END=219610455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1068:0,63,255:29,0 chr2 219610456 . A . PASS END=219610524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:32:0,81,1268:0,81,255:40,0 chr2 219610878 . G . PASS END=219610944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1278:0,84,255:40,0 chr2 219610945 . G . PASS END=219610945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1352:0,78,255:33,0 chr2 219610946 . C . PASS END=219610954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:81:36:0,81,1305:0,81,255:33,0 chr2 219611726 . C . PASS END=219611736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:25,0 chr2 219611737 . C . PASS END=219611743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:29,0 chr2 219611744 . T . PASS END=219611744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 219611745 . C . PASS END=219611750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1033:0,87,255:29,0 chr2 219611751 . A . PASS END=219611751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 219611752 . G . PASS END=219611763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1102:0,87,255:29,0 chr2 219611764 . G . PASS END=219611764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 219611765 . G . PASS END=219611766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 219611767 . C . PASS END=219611767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 219611768 . C . PASS END=219611780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:30:0,82,1088:0,82,255:33,0 chr2 219611781 . A . PASS END=219611781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1155:0,69,255:31,0 chr2 219611782 . C . PASS END=219611823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1145:0,83,255:35,0 chr2 219611824 . T . PASS END=219611824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:31,0 chr2 219611825 . T . PASS END=219611835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1158:0,88,255:33,0 chr2 219611836 . G . PASS END=219611837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:78:34:0,78,1170:0,86,255:26,0 chr2 219611838 . C . PASS END=219611839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 219611840 . T . PASS END=219611844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,89,255:26,0 chr2 219611845 . C . PASS END=219611917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1097:0,86,255:32,0 chr2 219612013 . C . PASS END=219612085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:85:34:0,85,1188:0,85,255:37,0 chr2 219612086 . T . PASS END=219612087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 219612088 . G . PASS END=219612088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 219612089 . T . PASS END=219612095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:31:0,66,990:0,93,255:26,0 chr2 219612320 . G . PASS END=219612322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1003:0,87,255:30,0 chr2 219612323 . T . PASS END=219612323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:29,0 chr2 219612324 . C . PASS END=219612353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:30:0,88,1117:0,88,255:37,0 chr2 219612354 . A . PASS END=219612354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1205:0,56,255:34,0 chr2 219612355 . A . PASS END=219612448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1105:0,89,255:40,0 chr2 219612828 . G . PASS END=219612931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:96:39:0,96,1382:0,101,255:40,0 chr2 219612932 . C . PASS END=219612932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:33,0 chr2 219612933 . T . PASS END=219612950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:33:0,87,1235:0,88,255:34,0 chr2 219613559 . G . PASS END=219613657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:96:39:0,96,1346:0,96,255:40,0 chr2 219613976 . G . PASS END=219614110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:99:43:0,113,1604:0,113,255:40,0 chr2 219614732 . C . PASS END=219614748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,986:0,68,255:27,0 chr2 219614749 . C . PASS END=219614754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:31,0 chr2 219614755 . A . PASS END=219614756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 219614757 . A . PASS END=219614760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1178:0,93,255:31,0 chr2 219614761 . G . PASS END=219614761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:29,0 chr2 219614762 . C . PASS END=219614774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 219614775 . A . PASS END=219614775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,909:0,32,255:27,0 chr2 219614776 . T . PASS END=219614776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 219614777 . G . PASS END=219614800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1141:0,80,255:35,0 chr2 219614801 . A . PASS END=219614801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1125:0,72,255:31,0 chr2 219614802 . G . PASS END=219614815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:32:0,81,1215:0,89,255:32,0 chr2 219614816 . C . PASS END=219614850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 219614851 . G . PASS END=219614869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,51,255:19,0 chr2 219616427 . C . PASS END=219616429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 219616430 . G . PASS END=219616438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 219616439 . C . PASS END=219616439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr2 219616440 . C . PASS END=219616459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr2 219616460 . G . PASS END=219616460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219616461 . G . PASS END=219616494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:32,0 chr2 219616495 . A . PASS END=219616512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:24:0,69,1008:0,71,255:26,0 chr2 219616513 . A . PASS END=219616513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 219616514 . G . PASS END=219616528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 219616529 . G . PASS END=219616529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219617486 . G . PASS END=219617696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:51:0,120,1800:0,123,255:40,0 chr2 219617838 . G . PASS END=219617989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,1:78:99:64:0,120,1800:0,166,255:40,0 chr2 219618307 . T . PASS END=219618309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,102,1272:0,102,255:36,0 chr2 219618310 . T . PASS END=219618310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1105:0,75,255:34,0 chr2 219618311 . C . PASS END=219618321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:92:36:0,92,1283:0,92,255:40,0 chr2 219618322 . T . PASS END=219618322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:74:41:0,74,1416:0,74,255:38,0 chr2 219618323 . C . PASS END=219618339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:82:42:0,82,1354:0,82,255:40,0 chr2 219618340 . A . PASS END=219618340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1406:0,77,255:38,0 chr2 219618341 . A . PASS END=219618341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:32:42:0,32,1228:0,32,255:38,0 chr2 219618342 . G . PASS END=219618356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:85:41:0,85,1386:0,85,255:40,0 chr2 219618357 . C . PASS END=219618360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1274:0,62,255:36,0 chr2 219618361 . G . PASS END=219618369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:40:0,82,1390:0,82,255:40,0 chr2 219618370 . A . PASS END=219618370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1364:0,65,255:38,0 chr2 219618371 . A . PASS END=219618385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1381:0,84,255:39,0 chr2 219618386 . A . PASS END=219618386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1366:0,68,255:35,0 chr2 219618387 . G . PASS END=219618392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:39:0,81,1307:0,81,255:36,0 chr2 219618857 . A . PASS END=219618936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:32:0,80,1110:0,80,255:40,2 chr2 219618937 . T . PASS END=219618937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:66:45:0,66,1505:0,66,255:39,2 chr2 219618938 . T . PASS END=219619112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:34:0,81,1215:0,81,255:40,1 chr2 219646536 . T . LowGQ END=219646536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:17,0:17:0:17:0,0,0:0,51,255:0,0 chr2 219646571 . C . PASS END=219646571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:16,0 chr2 219646701 . C . PASS END=219646701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1249:0,99,255:33,0 chr2 219646724 . C . PASS END=219646724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 219646744 . C . PASS END=219646744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 219646900 . C . PASS END=219646900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 219646906 . A . PASS END=219646906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 219646907 . T . PASS END=219646910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 219646911 . T . PASS END=219646911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr2 219646912 . G . PASS END=219646916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219646917 . G . PASS END=219646961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr2 219646962 . C . PASS END=219646965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:21,0 chr2 219646966 . T . PASS END=219646966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,665:0,8,255:19,0 chr2 219646967 . G . PASS END=219646972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,709:0,63,255:21,0 chr2 219646973 . A . PASS END=219646973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,631:0,46,255:19,0 chr2 219646974 . C . PASS END=219646980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 219646981 . A . PASS END=219646981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,718:0,33,255:18,0 chr2 219646982 . G . PASS END=219646983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:21,0 chr2 219646984 . G . PASS END=219646986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 219646987 . A . PASS END=219646988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,717:0,52,255:21,0 chr2 219646989 . G . PASS END=219646992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:22,0 chr2 219646993 . G . PASS END=219646993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 219646994 . C . PASS END=219647000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,734:0,66,255:22,0 chr2 219647001 . T . PASS END=219647001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 219647002 . G . PASS END=219647004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 219647005 . G . PASS END=219647005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:20,0 chr2 219647006 . C . PASS END=219647007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,837:0,66,255:22,0 chr2 219647008 . C . PASS END=219647008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 219647009 . T . PASS END=219647013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,748:0,66,255:25,0 chr2 219647014 . T . PASS END=219647015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,828:0,42,255:23,0 chr2 219647016 . G . PASS END=219647019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219647020 . A . PASS END=219647020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 219647021 . A . PASS END=219647037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:25,0 chr2 219647038 . G . PASS END=219647038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,837:0,45,255:22,0 chr2 219647039 . G . PASS END=219647043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:24,0 chr2 219647044 . G . PASS END=219647044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 219647045 . G . PASS END=219647046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219647047 . C . PASS END=219647047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 219647048 . C . PASS END=219647051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:24,0 chr2 219647052 . T . PASS END=219647052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 219647053 . G . PASS END=219647071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 219647072 . G . PASS END=219647072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 219647073 . C . PASS END=219647083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 219647084 . T . PASS END=219647084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:21,0 chr2 219647085 . T . PASS END=219647093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 219647094 . A . PASS END=219647094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 219647095 . G . PASS END=219647100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 219647101 . C . PASS END=219647101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 219647102 . T . PASS END=219647104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219647105 . G . PASS END=219647105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219647106 . C . PASS END=219647107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219647108 . T . PASS END=219647115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219647116 . C . PASS END=219647118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219647119 . C . PASS END=219647135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,44,255:19,0 chr2 219647136 . T . PASS END=219647142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:15:0,39,585:0,45,255:13,0 chr2 219647143 . C . PASS END=219647149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:14,0 chr2 219647150 . A . PASS END=219647151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 219647152 . C . PASS END=219647160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:14:0,21,315:0,42,255:9,0 chr2 219674297 . C . PASS END=219674468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:29:0,81,1086:0,87,255:40,0 chr2 219674469 . T . PASS END=219674488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1014:0,68,255:26,0 chr2 219674489 . A . PASS END=219674490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,892:0,26,255:23,0 chr2 219674491 . G . PASS END=219674491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 219676942 . C . PASS END=219676942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 219676945 . G . PASS END=219676955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,870:0,66,255:26,0 chr2 219676956 . A . PASS END=219677146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:80:27:0,80,994:0,80,255:40,0 chr2 219677148 . C . PASS END=219677148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 219677274 . G . PASS END=219677282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,107,1443:0,107,255:40,0 chr2 219677283 . T . PASS END=219677283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:61:46:0,61,1590:0,61,255:40,0 chr2 219677284 . A . PASS END=219677473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:84:33:0,84,1260:0,95,255:40,0 chr2 219677645 . A . PASS END=219677654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 219677655 . C . PASS END=219677656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219677657 . G . PASS END=219677660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 219677661 . G . PASS END=219677661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:22,0 chr2 219677662 . A . PASS END=219677662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:22,0 chr2 219677663 . T . PASS END=219677681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr2 219677682 . G . PASS END=219677682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,908:0,39,255:24,0 chr2 219677683 . A . PASS END=219677755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,61,255:26,0 chr2 219677756 . A . PASS END=219677759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:52:22:0,52,784:0,52,255:20,0 chr2 219677760 . C . PASS END=219677761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 219677762 . C . PASS END=219677779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr2 219677780 . G . PASS END=219677780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr2 219677781 . G . PASS END=219677815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 219677816 . C . PASS END=219677820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 219677824 . G . PASS END=219677824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219678744 . A . PASS END=219678746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 219678747 . T . PASS END=219678749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219678750 . A . PASS END=219678750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 219678751 . A . PASS END=219678762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:22,0 chr2 219678763 . G . PASS END=219678763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 219678764 . G . PASS END=219678777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:22:0,63,945:0,66,255:26,0 chr2 219678778 . T . PASS END=219678778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,831:0,48,255:24,0 chr2 219678779 . C . PASS END=219678786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,898:0,84,255:28,0 chr2 219678787 . A . PASS END=219678787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 219678788 . C . PASS END=219678789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219678790 . C . PASS END=219678790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 219678791 . T . PASS END=219678794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219678795 . A . PASS END=219678798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 219678799 . A . PASS END=219678799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:25,0 chr2 219678800 . G . PASS END=219678803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219678804 . G . PASS END=219678805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219678806 . C . PASS END=219678810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr2 219678811 . A . PASS END=219678811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219678812 . C . PASS END=219678812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1031:0,57,255:24,0 chr2 219678813 . G . PASS END=219678822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 219678823 . T . PASS END=219678839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1002:0,81,255:28,0 chr2 219678840 . G . PASS END=219678874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,892:0,69,255:26,0 chr2 219678875 . G . PASS END=219678875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,759:0,36,255:21,0 chr2 219678876 . C . PASS END=219678876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 219678877 . C . PASS END=219678878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 219678879 . T . PASS END=219678911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,537:0,45,255:18,0 chr2 219678919 . G . PASS END=219678919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 219679101 . A . PASS END=219679155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:32:0,92,1221:0,92,255:36,0 chr2 219679156 . T . PASS END=219679156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1144:0,74,255:31,0 chr2 219679157 . T . PASS END=219679183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1216:0,86,255:33,0 chr2 219679186 . G . PASS END=219679186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 219679187 . T . PASS END=219679187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,990:0,93,255:22,0 chr2 219679266 . A . PASS END=219679277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:12,0 chr2 219679278 . T . PASS END=219679279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 219679280 . T . PASS END=219679281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219679282 . C . PASS END=219679336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:15:0,40,627:0,40,255:18,0 chr2 219679337 . C . PASS END=219679337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 219679338 . A . PASS END=219679344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,676:0,51,255:18,0 chr2 219679345 . C . PASS END=219679346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:17,0 chr2 219679347 . G . PASS END=219679367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,607:0,51,255:18,0 chr2 219679368 . C . PASS END=219679369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 219679370 . G . PASS END=219679370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 219679371 . C . PASS END=219679372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 219679373 . A . PASS END=219679374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219679375 . C . PASS END=219679382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:22,0 chr2 219679383 . T . PASS END=219679383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 219679384 . C . PASS END=219679388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,799:0,66,255:24,0 chr2 219679389 . A . PASS END=219679389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 219679390 . C . PASS END=219679390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 219679391 . C . PASS END=219679391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 219679392 . C . PASS END=219679392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr2 219679393 . A . PASS END=219679394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 219679395 . T . PASS END=219679395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,911:0,67,255:27,0 chr2 219679396 . T . PASS END=219679470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1017:0,80,255:35,0 chr2 219679471 . C . PASS END=219679480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:24,0 chr2 219679632 . A . PASS END=219679632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 219679634 . C . PASS END=219679658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1280:0,81,255:36,0 chr2 219679659 . T . PASS END=219679659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1263:0,61,255:33,0 chr2 219679660 . G . PASS END=219679660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:36:0,92,1310:0,92,255:33,0 chr2 219679661 . G . PASS END=219679661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1205:0,56,255:33,0 chr2 219679662 . C . PASS END=219679737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:33:0,84,1166:0,84,255:40,0 chr2 219679738 . G . PASS END=219679738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr2 219679739 . C . PASS END=219679751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,92,255:35,0 chr2 219679752 . G . PASS END=219679753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 219679906 . G . PASS END=219679906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,119,1651:0,119,255:40,0 chr2 219679948 . G . PASS END=219679948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 219679962 . G . PASS END=219679962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,105,1575:0,129,255:35,0 chr2 219688485 . T . PASS END=219688487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219688488 . G . PASS END=219688502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:13,0 chr2 219688503 . G . PASS END=219688503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr2 219688504 . A . PASS END=219688507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 219688508 . C . PASS END=219688508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 219688509 . A . PASS END=219688525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:16:0,44,598:0,44,255:19,0 chr2 219688526 . G . PASS END=219688528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 219688529 . C . PASS END=219688529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 219688530 . C . PASS END=219688568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:22,0 chr2 219688569 . C . PASS END=219688569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 219688570 . T . PASS END=219688578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:20,0 chr2 219688579 . T . PASS END=219688601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,651:0,41,255:19,0 chr2 219688945 . C . PASS END=219689075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:92:35:0,92,1311:0,92,255:40,0 chr2 219689076 . G . PASS END=219689076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 219689077 . C . PASS END=219689078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:36:0,84,1260:0,108,255:32,0 chr2 219689079 . G . PASS END=219689079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:27,0 chr2 219689080 . G . PASS END=219689086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:27,0 chr2 219689087 . A . PASS END=219689087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 219689088 . G . PASS END=219689091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:32,0 chr2 219689262 . A . PASS END=219689294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:36:0,84,1260:0,87,255:39,0 chr2 219689295 . C . PASS END=219689299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:35:0,75,1125:0,75,255:26,0 chr2 219691651 . C . PASS END=219691651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 219691652 . A . PASS END=219691656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:29,0 chr2 219691657 . C . PASS END=219691657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 219691658 . G . PASS END=219691777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:29:0,87,1003:0,87,255:40,0 chr2 219691778 . A . PASS END=219691778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1281:0,75,255:33,0 chr2 219691779 . G . PASS END=219691786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,98,255:35,0 chr2 219691787 . G . PASS END=219691787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1388:0,76,255:31,0 chr2 219691788 . A . PASS END=219691816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1260:0,93,255:33,0 chr2 219691970 . A . PASS END=219692096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:41:0,87,1466:0,87,255:40,0 chr2 219692298 . C . PASS END=219692352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,107,1482:0,107,255:40,0 chr2 219692556 . C . PASS END=219692556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 219692557 . C . PASS END=219692557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 219692558 . C . PASS END=219692570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:35,0 chr2 219692571 . T . PASS END=219692601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:34:0,88,1227:0,88,255:35,0 chr2 219692727 . C . PASS END=219692733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,886:0,75,255:26,0 chr2 219692734 . G . PASS END=219692734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 219692735 . A . PASS END=219692735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 219692736 . C . PASS END=219692736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219692737 . C . PASS END=219692738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 219692739 . G . PASS END=219692740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219692741 . A . PASS END=219692742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 219692743 . T . PASS END=219692744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219692745 . G . PASS END=219692747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219692748 . A . PASS END=219692750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:42:30:0,42,630:0,90,255:15,0 chr2 219692751 . C . PASS END=219692764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:30:27:0,30,450:0,50,255:13,0 chr2 219692765 . A . PASS END=219692778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:21:24:0,21,315:0,72,255:8,0 chr2 219692779 . A . PASS END=219692780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:18:24:0,18,270:0,72,255:6,0 chr2 219692781 . C . PASS END=219692785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:3:24:0,3,45:0,56,255:3,0 chr2 219693242 . C . PASS END=219693245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 219693246 . A . PASS END=219693253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,637:0,43,255:19,0 chr2 219693254 . G . PASS END=219693257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 219693258 . C . PASS END=219693258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 219693259 . T . PASS END=219693270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr2 219693271 . A . PASS END=219693271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr2 219693272 . G . PASS END=219693307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,846:0,61,255:24,0 chr2 219693308 . A . PASS END=219693308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 219693309 . G . PASS END=219693316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 219693317 . T . PASS END=219693317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 219693318 . C . PASS END=219693323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 219694701 . C . PASS END=219694704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 219694705 . A . PASS END=219694705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 219694706 . G . PASS END=219694706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 219694707 . C . PASS END=219694709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 219694710 . G . PASS END=219694723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:23:0,64,923:0,64,255:26,0 chr2 219694724 . C . PASS END=219694736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:28,0 chr2 219694737 . A . PASS END=219694737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 219694738 . G . PASS END=219694745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219694746 . G . PASS END=219694746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219694747 . G . PASS END=219694752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219694753 . T . PASS END=219694753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 219694754 . A . PASS END=219694754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219694755 . G . PASS END=219694758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 219694759 . G . PASS END=219694760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219694761 . G . PASS END=219694774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:26,0 chr2 219694775 . A . PASS END=219694777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 219694778 . G . PASS END=219694779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 219694780 . A . PASS END=219694783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219694784 . A . PASS END=219694794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:28:0,69,1035:0,84,255:26,0 chr2 219694795 . C . PASS END=219694796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219694797 . G . PASS END=219694802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219694803 . C . PASS END=219694812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,83,255:28,0 chr2 219694813 . T . PASS END=219694821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,976:0,65,255:25,0 chr2 219694822 . C . PASS END=219694822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:23,0 chr2 219694823 . C . PASS END=219694829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,906:0,62,255:23,0 chr2 219694830 . G . PASS END=219694830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 219694831 . G . PASS END=219694833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 219694834 . A . PASS END=219694834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 219694835 . A . PASS END=219694835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 219694836 . T . PASS END=219694836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 219694837 . G . PASS END=219694845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,861:0,69,255:23,0 chr2 219694846 . G . PASS END=219694865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr2 219694866 . C . PASS END=219694870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 219694871 . C . PASS END=219694888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,720:0,44,255:19,0 chr2 219694889 . G . PASS END=219694889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219694890 . C . PASS END=219694890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 219694891 . T . PASS END=219694907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:24,0 chr2 219694908 . T . PASS END=219694908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 219694909 . G . PASS END=219694909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 219694910 . T . PASS END=219694910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 219694911 . G . PASS END=219694966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,845:0,65,255:24,0 chr2 219694967 . C . PASS END=219694967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 219694968 . T . PASS END=219694973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1080:0,75,255:26,0 chr2 219694974 . G . PASS END=219694981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219694982 . G . PASS END=219694983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219694984 . A . PASS END=219694985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219694986 . G . PASS END=219695022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,969:0,65,255:26,0 chr2 219695023 . G . PASS END=219695024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 219695025 . A . PASS END=219695025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 219695026 . T . PASS END=219695035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1031:0,81,255:28,0 chr2 219695036 . C . PASS END=219695036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:26,0 chr2 219695037 . C . PASS END=219695037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219695038 . A . PASS END=219695038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:25,0 chr2 219695039 . A . PASS END=219695039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219695040 . G . PASS END=219695068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,86,255:30,0 chr2 219695069 . G . PASS END=219695095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,914:0,72,255:26,0 chr2 219695096 . A . PASS END=219695096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 219695097 . C . PASS END=219695104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 219695469 . C . PASS END=219695472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,947:0,64,255:26,0 chr2 219695473 . C . PASS END=219695482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1049:0,84,255:30,0 chr2 219695483 . G . PASS END=219695483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:29,0 chr2 219695484 . G . PASS END=219695486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1125:0,90,255:30,0 chr2 219695487 . G C, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.635;ReadPosRankSum=1.434;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,16,0:0.533,0.000:30:10,8,0:4,8,0:48:85,0,50,479,501,986:255,0,255:14,0:5.0000e+01,6.5751e-05,5.2876e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,6,11,5:8,6,5,11 chr2 219695488 . C . PASS END=219695490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 219695491 . C . PASS END=219695491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 219695492 . C . PASS END=219695495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 219695496 . C . PASS END=219695496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 219695497 . C . PASS END=219695515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1162:0,83,255:33,0 chr2 219695516 . G . PASS END=219695516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1225:0,64,255:31,0 chr2 219695517 . T . PASS END=219695524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1302:0,89,255:35,0 chr2 219695525 . A . PASS END=219695543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1280:0,92,255:37,0 chr2 219695544 . T . PASS END=219695544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1288:0,77,255:32,0 chr2 219695545 . C . PASS END=219695588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:30:0,83,1164:0,83,255:35,0 chr2 219695589 . A . PASS END=219695593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:29:0,78,1170:0,87,255:26,0 chr2 219695594 . C . PASS END=219695604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,985:0,84,255:28,0 chr2 219695605 . T . PASS END=219695618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:22,0 chr2 219695619 . T . PASS END=219695624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 219696059 . C . PASS END=219696073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,651:0,48,255:17,0 chr2 219696074 . C . PASS END=219696080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 219696081 . G . PASS END=219696098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,668:0,43,255:19,0 chr2 219696461 . C . PASS END=219696479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:24,0 chr2 219696480 . A . PASS END=219696480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 219696481 . G . PASS END=219696493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr2 219724761 . A . PASS END=219724768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 219724769 . G . PASS END=219724788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:19,0 chr2 219724789 . G . PASS END=219724820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr2 219724821 . C . PASS END=219724840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,720:0,44,255:19,0 chr2 219735749 . G . PASS END=219735749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 219735750 . G . PASS END=219735756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219735757 . G . PASS END=219735757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 219735758 . C . PASS END=219735760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 219735761 . C . PASS END=219735761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr2 219735762 . C . PASS END=219735823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:91:32:0,91,1140:0,91,255:36,0 chr2 219735824 . C . PASS END=219735824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:30,0 chr2 219735825 . G . PASS END=219735863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1208:0,83,255:33,0 chr2 219735864 . G . PASS END=219735864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:30,0 chr2 219735865 . C . PASS END=219735881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1194:0,83,255:33,0 chr2 219735882 . G . PASS END=219735882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 219735883 . G . PASS END=219735883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 219735884 . G . PASS END=219735891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 219735892 . A . PASS END=219735894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219735895 . G . PASS END=219735943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:23:0,63,945:0,65,255:26,0 chr2 219735944 . G . PASS END=219735953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219735954 . C . PASS END=219735954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219735955 . G . PASS END=219735957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 219735958 . T . PASS END=219735961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219735962 . G . PASS END=219735969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:20:0,48,720:0,60,255:19,0 chr2 219736207 . A . PASS END=219736239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,815:0,66,255:25,0 chr2 219736240 . C . PASS END=219736240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 219736241 . T . PASS END=219736280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,917:0,62,255:25,0 chr2 219736281 . A . PASS END=219736281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 219736282 . T . PASS END=219736288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 219736289 . G . PASS END=219736299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,798:0,50,255:19,0 chr2 219736300 . G . PASS END=219736307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 219736308 . C . PASS END=219736313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 219736314 . C . PASS END=219736321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:22,0 chr2 219736322 . G . PASS END=219736352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:40:19:0,40,643:0,40,255:20,0 chr2 219736353 . G . PASS END=219736353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219736354 . G . PASS END=219736374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:18,0 chr2 219736375 . C . PASS END=219736375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 219736376 . C . PASS END=219736380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 219736381 . G . PASS END=219736381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 219736382 . C . PASS END=219736387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,620:0,48,255:16,0 chr2 219736388 . G . PASS END=219736388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 219736389 . G . PASS END=219736392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 219736393 . G . PASS END=219736393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 219736394 . C . PASS END=219736397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:16,0 chr2 219736398 . G . PASS END=219736409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:15,0 chr2 219736410 . T . PASS END=219736410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:11,0 chr2 219736411 . G . PASS END=219736417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:12,0 chr2 219736418 . C . PASS END=219736418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 219736419 . T . PASS END=219736423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,466:0,39,255:13,0 chr2 219736424 . C . PASS END=219736424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 219736425 . G . PASS END=219736425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 219736426 . A . PASS END=219736426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 219736427 . C . PASS END=219736432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr2 219736433 . G . PASS END=219736433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,434:0,8,255:11,0 chr2 219736434 . G . PASS END=219736434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 219736435 . A . PASS END=219736435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 219736436 . C . PASS END=219736437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 219736438 . T . PASS END=219736438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr2 219736439 . C . PASS END=219736440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 219736441 . G . LowGQ END=219736441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr2 219736442 . G . PASS END=219736457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,374:0,36,255:12,0 chr2 219736458 . C . PASS END=219736458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr2 219736459 . T . PASS END=219736464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 219736465 . T . PASS END=219736465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr2 219736466 . G . PASS END=219736472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 219736473 . C . PASS END=219736473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 219736474 . G . PASS END=219736485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 219736486 . G . PASS END=219736494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 219736495 . A . PASS END=219736497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 219736498 . T . PASS END=219736498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:10,0 chr2 219736499 . C . PASS END=219736502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 219736503 . G . PASS END=219736503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 219736504 . C . PASS END=219736517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:11,0 chr2 219736518 . C . PASS END=219736518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 219736519 . A . PASS END=219736519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 219736520 . C . PASS END=219736523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219736524 . A . PASS END=219736524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,355:0,17,255:8,0 chr2 219736525 . A . PASS END=219736541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 219738106 . G . PASS END=219738106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 219738107 . C T, 0.02 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.751;ReadPosRankSum=0.751;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:8,1,0:0.111,0.000:9:5,0,0:3,1,0:23:12,0,50,36,286,322:12,0,255:8,0:2.1563e-02,2.3053e+01,7.6053e+01,5.8869e+01,3.4401e+02,3.4805e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,1,1,0:4,4,0,1 chr2 219738108 . C . PASS END=219738108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 219738109 . G . PASS END=219738137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:13,0 chr2 219738138 . A . LowGQ END=219738138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,388:0,0,255:12,0 chr2 219738139 . T . PASS END=219738144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 219738145 . G . PASS END=219738149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 219738150 . G . PASS END=219738169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,513:0,42,255:16,0 chr2 219738170 . G . PASS END=219738170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 219738171 . C . PASS END=219738189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:17,0 chr2 219738190 . C . PASS END=219738190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 219738191 . C . PASS END=219738193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:18,0 chr2 219738194 . C . PASS END=219738194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 219738195 . A . PASS END=219738215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,599:0,51,255:17,0 chr2 219738216 . G . PASS END=219738216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,549:0,18,255:13,0 chr2 219738217 . C . PASS END=219738224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 219738225 . G . PASS END=219738225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 219738226 . C . PASS END=219738227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 219738228 . C . PASS END=219738228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 219738229 . T . PASS END=219738288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,590:0,45,255:18,0 chr2 219738289 . C . PASS END=219738293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 219738294 . G . PASS END=219738294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:12,0 chr2 219738295 . C . PASS END=219738320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,459:0,39,255:13,0 chr2 219738321 . C . PASS END=219738381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,496:0,42,255:18,0 chr2 219738382 . A . PASS END=219738408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,482:0,39,255:13,0 chr2 219738409 . G . PASS END=219738415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 219738416 . A . PASS END=219738417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219738418 . C . PASS END=219738419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 219738420 . C . PASS END=219738420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219738421 . A . PASS END=219738421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 219738422 . G . PASS END=219738431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 219738432 . C . PASS END=219738432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 219738433 . C . PASS END=219738438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:11,0 chr2 219738439 . T . PASS END=219738439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:10,0 chr2 219738440 . G . PASS END=219738445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:11,0 chr2 219738446 . G . PASS END=219738454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219738455 . A . PASS END=219738455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:2:11:0,2,357:0,2,255:8,0 chr2 219738456 . C . PASS END=219738457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 219738458 . G . PASS END=219738484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:11,0 chr2 219738485 . A . PASS END=219738508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,360:0,27,255:9,0 chr2 219738509 . G . PASS END=219738516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:15:8:0,15,225:0,24,255:5,0 chr2 219738517 . G . PASS END=219738518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:7,0 chr2 219738519 . A . PASS END=219738519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:6,0 chr2 219738520 . C . PASS END=219738527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 219738528 . C . PASS END=219738528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,186:0,4,186:6,0 chr2 219738529 . C . PASS END=219738533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 219738534 . C . PASS END=219738534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 219738535 . C . PASS END=219738547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:7,0 chr2 219738548 . A . PASS END=219738548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 219738549 . G . PASS END=219738550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 219738551 . T . PASS END=219738554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 219738555 . C . PASS END=219738556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219738557 . T . PASS END=219738567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:7:0,18,270:0,21,182:6,0 chr2 219739428 . A . PASS END=219739444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,99,1472:0,107,255:40,0 chr2 219745285 . C . PASS END=219745285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219745348 . C . PASS END=219745348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219745360 . G . PASS END=219745360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219745377 . A . PASS END=219745377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 219745433 . C . PASS END=219745433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 219745448 . G . PASS END=219745448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr2 219745469 . G . PASS END=219745469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 219745516 . G . LowGQ END=219745516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,2 chr2 219745565 . G . PASS END=219745565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 219745569 . G . PASS END=219745569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 219745595 . C . PASS END=219745595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 219745648 . G . PASS END=219745648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:13,0 chr2 219745718 . A . PASS END=219745724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,909:0,64,255:26,0 chr2 219745725 . G . PASS END=219745725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219745726 . C . PASS END=219745726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 219745727 . G . PASS END=219745744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 219745745 . C . PASS END=219745745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 219745746 . T . PASS END=219745759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1166:0,87,255:32,0 chr2 219745760 . C . PASS END=219745760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1055:0,63,255:30,0 chr2 219745761 . A . PASS END=219745830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1129:0,90,255:37,0 chr2 219746883 . G . PASS END=219746896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:12,0 chr2 219746897 . A . PASS END=219746897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 219746898 . C . PASS END=219746899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 219746900 . T . PASS END=219746903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 219746904 . G . PASS END=219746904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 219746905 . G . PASS END=219746922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:19,0 chr2 219746923 . G . PASS END=219746945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:26,0 chr2 219746946 . A . PASS END=219746951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:30,0 chr2 219746952 . C . PASS END=219746952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 219746953 . C . PASS END=219746978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1119:0,93,255:33,0 chr2 219746979 . G . PASS END=219746979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:28,0 chr2 219746980 . C . PASS END=219747115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:31:0,81,1215:0,92,255:40,0 chr2 219747116 . T . PASS END=219747132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:24:0,63,945:0,72,255:26,0 chr2 219747133 . A . PASS END=219747140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 219747141 . C . PASS END=219747143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219747144 . A . PASS END=219747146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 219754695 . T . PASS END=219754695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 219754706 . G . PASS END=219754742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,258:0,24,255:9,0 chr2 219754743 . A . PASS END=219754752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 219754753 . G . PASS END=219754824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,463:0,42,255:19,0 chr2 219754825 . G . PASS END=219754872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,853:0,66,255:26,0 chr2 219754873 . C . PASS END=219754879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 219754880 . G . PASS END=219754882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219754883 . G . PASS END=219754889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219754890 . C . PASS END=219754890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 219754891 . C . PASS END=219754891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219754892 . T . PASS END=219754892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 219754893 . G . PASS END=219754898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 219754899 . T . PASS END=219754899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 219754900 . G . PASS END=219754923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1047:0,84,255:30,0 chr2 219754924 . C . PASS END=219754924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 219754925 . C . PASS END=219754928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 219754929 . A . PASS END=219754933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 219754934 . G . PASS END=219754939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 219754940 . G . PASS END=219754941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:30:0,77,1124:0,77,255:26,0 chr2 219754942 . C . PASS END=219754946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 219754947 . G . PASS END=219754947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 219754948 . G . PASS END=219754949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 219754950 . C . PASS END=219754962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:26,0 chr2 219754963 . G . PASS END=219754968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,958:0,81,255:27,0 chr2 219754969 . T . PASS END=219754969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 219754970 . G . PASS END=219754981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:28,0 chr2 219754982 . T . PASS END=219754988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1014:0,68,255:25,0 chr2 219754989 . C . PASS END=219754989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,935:0,51,255:21,0 chr2 219754990 . G . PASS END=219755007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr2 219755008 . G . PASS END=219755008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219755009 . A . PASS END=219755009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 219755010 . C . PASS END=219755011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,926:0,81,255:27,0 chr2 219755012 . T . PASS END=219755015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:25,0 chr2 219755016 . G . PASS END=219755016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,884:0,48,255:20,0 chr2 219755017 . G . PASS END=219755047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,693:0,60,255:22,0 chr2 219755048 . C . PASS END=219755048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:19,0 chr2 219755049 . G . PASS END=219755056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219755057 . G . PASS END=219755057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219755058 . G . PASS END=219755058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,593:0,32,255:17,0 chr2 219755059 . C . PASS END=219755086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:17:0,44,584:0,44,255:19,0 chr2 219755098 . C . PASS END=219755099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 219757496 . G . PASS END=219757560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 219757561 . G . PASS END=219757615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr2 219757616 . C . PASS END=219757627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 219757628 . G . PASS END=219757635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 219757636 . C . PASS END=219757644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 219757645 . G . PASS END=219757645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr2 219757646 . C . PASS END=219757677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:8,0 chr2 219757678 . C . PASS END=219757700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,227:6,0 chr2 219757701 . C . LowGQ END=219757701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,172:18,0,189:5,0 chr2 219757702 . T . PASS END=219757746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,180:0,15,186:6,0 chr2 219757747 . G . PASS END=219757747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219757748 . G . PASS END=219757748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,233:0,7,233:6,0 chr2 219757749 . T . PASS END=219757754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219757755 . T . PASS END=219757755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:7,0 chr2 219757756 . C . PASS END=219757756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219757757 . G . PASS END=219757757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:6,0 chr2 219757758 . A . PASS END=219757758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 219757759 . A . LowGQ END=219757760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,184:0,0,193:7,0 chr2 219757761 . A . PASS END=219757761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 219757762 . G . PASS END=219757762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 219757763 . T . PASS END=219757769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 219757770 . A . PASS END=219757771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 219757772 . T . PASS END=219757773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 219757774 . C . PASS END=219757774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 219757775 . T . PASS END=219757776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 219757777 . C . PASS END=219757777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 219757778 . G . PASS END=219757782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 219757783 . C . PASS END=219757783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 219757784 . G . PASS END=219757813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,227:0,21,227:9,0 chr2 219757814 . G . PASS END=219757816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 219757817 . C . PASS END=219757829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 219757830 . A . PASS END=219757830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 219757831 . G . PASS END=219757841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 219757842 . G . PASS END=219757890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,421:0,33,255:13,0 chr2 219757891 . G . PASS END=219757892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 219757893 . G . PASS END=219757893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 219757894 . C . PASS END=219757919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,460:0,42,255:14,0 chr2 219757920 . G . PASS END=219757932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,480:0,39,255:13,0 chr2 219757933 . G . PASS END=219757958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,574:0,45,255:16,0 chr2 219757959 . G . PASS END=219757959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr2 219757960 . C . PASS END=219758006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:17:0,48,643:0,50,255:19,0 chr2 219758007 . C . PASS END=219758010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 219758011 . G . PASS END=219758019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 219758101 . G . PASS END=219758101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 219758108 . C . PASS END=219758108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 219758132 . C . PASS END=219758132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 219758231 . C . PASS END=219758231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 219758332 . C . PASS END=219758332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:35:0,93,1395:0,105,255:31,0 chr2 219758434 . C . PASS END=219758434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 219824543 . A . PASS END=219824551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 219824552 . G . PASS END=219824586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,249:0,21,249:9,0 chr2 219824587 . C . PASS END=219824602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 219824603 . C . PASS END=219824611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219824612 . G . PASS END=219824612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 219824613 . A . PASS END=219824614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 219824615 . A . PASS END=219824615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:8,0 chr2 219824616 . A . PASS END=219824624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219824625 . C . PASS END=219824648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr2 219824649 . T . PASS END=219824668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,341:0,27,255:9,0 chr2 219824669 . C . PASS END=219824710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 219824711 . C . PASS END=219824713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 219824714 . T . PASS END=219824717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 219824718 . T . PASS END=219824728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219824729 . G . PASS END=219824732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:10,0 chr2 219824733 . T . PASS END=219824743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219824744 . C . PASS END=219824776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:11,0 chr2 219824777 . G . PASS END=219824778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219824779 . C . PASS END=219824800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr2 219824801 . C . PASS END=219824804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 219824805 . C . LowGQ END=219824805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:7,0 chr2 219824806 . A . PASS END=219824808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:10,0 chr2 219824809 . C . PASS END=219824846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 219824847 . A . PASS END=219824897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:6,0 chr2 219824898 . A . PASS END=219824996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:3:1:0,3,39:0,3,39:3,0 chr2 219824997 . G . PASS END=219825029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:4:0,12,133:0,12,133:6,0 chr2 219825030 . C . PASS END=219825046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:8,0 chr2 219825047 . G . PASS END=219825053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,388:0,33,255:12,0 chr2 219825054 . G . PASS END=219825054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 219825055 . C . PASS END=219825065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 219825066 . G . PASS END=219825066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 219825067 . G . PASS END=219825069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 219825070 . G . PASS END=219825095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 219825096 . A . PASS END=219825096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 219825097 . G . PASS END=219825107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,629:0,48,255:17,0 chr2 219825108 . G . PASS END=219825108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr2 219825109 . T . PASS END=219825113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 219825114 . G . PASS END=219825114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 219825115 . C . PASS END=219825118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 219825119 . T . PASS END=219825119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:17,0 chr2 219825120 . T . PASS END=219825126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 219825127 . C . PASS END=219825127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 219825128 . C . PASS END=219825133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 219825134 . T . PASS END=219825134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr2 219825135 . G . PASS END=219825136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:16,0 chr2 219825137 . T . PASS END=219825137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,533:0,21,255:12,0 chr2 219825138 . A . PASS END=219825167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,615:0,41,255:17,0 chr2 219825168 . T . PASS END=219825168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 219825169 . G . PASS END=219825175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 219825176 . T . PASS END=219825180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr2 219825181 . C . PASS END=219825181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 219825182 . C . PASS END=219825184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:13,0 chr2 219825185 . G . PASS END=219825187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 219825188 . G . PASS END=219825188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 219825189 . T . PASS END=219825214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,604:0,45,255:16,0 chr2 219825215 . T . PASS END=219825221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219825222 . A . PASS END=219825274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:14:0,40,466:0,40,255:17,0 chr2 219825275 . G . PASS END=219825275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 219825276 . A . PASS END=219825307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr2 219825308 . G . PASS END=219825308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 219825309 . C . PASS END=219825326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 219825327 . T . PASS END=219825330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219825331 . C . PASS END=219825331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:11,0 chr2 219825332 . A . PASS END=219825338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 219825339 . T . PASS END=219825339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 219825340 . C . PASS END=219825344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 219825345 . T . PASS END=219825345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr2 219825346 . C . PASS END=219825348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 219825349 . C . PASS END=219825349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 219825350 . T . PASS END=219825355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 219825356 . T . PASS END=219825356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 219825357 . A . PASS END=219825359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 219825360 . T . PASS END=219825363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219825364 . C . PASS END=219825364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 219825365 . A . PASS END=219825370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219825371 . A . PASS END=219825377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 219825378 . A . PASS END=219825381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 219825382 . A . PASS END=219825382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 219825383 . C . PASS END=219825401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:10:0,21,315:0,30,255:9,0 chr2 219825402 . A . PASS END=219825404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:8:0,18,270:0,24,255:6,0 chr2 219825405 . C . PASS END=219825417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 219825418 . C . PASS END=219825428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:10,0 chr2 219825429 . G . PASS END=219825462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,272:0,24,255:8,0 chr2 219825463 . G . PASS END=219825463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:7,0 chr2 219825464 . A . PASS END=219825484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,280:0,24,255:9,0 chr2 219825485 . C . PASS END=219825513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr2 219825514 . C . PASS END=219825550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,537:0,45,255:19,0 chr2 219825551 . G . PASS END=219825571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:22:0,63,945:0,66,255:26,0 chr2 219825572 . C . PASS END=219825580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 219825581 . T . PASS END=219825581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:26,0 chr2 219825582 . C . PASS END=219825604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,972:0,81,255:28,0 chr2 219825605 . G . PASS END=219825605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 219825606 . C . PASS END=219825621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,976:0,81,255:28,0 chr2 219825622 . C . PASS END=219825643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:24:0,61,811:0,61,255:26,0 chr2 219825644 . T . PASS END=219825646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 219846389 . C . PASS END=219846395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,637:0,51,255:17,0 chr2 219846396 . T . PASS END=219846396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 219846397 . A . PASS END=219846440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:19,0 chr2 219846441 . C . PASS END=219846460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 219846461 . G . PASS END=219846462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 219846463 . G . PASS END=219846465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:11,0 chr2 219846466 . T . PASS END=219846505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:8,0 chr2 219846506 . G . PASS END=219846524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:12:6:0,12,180:0,18,188:6,0 chr2 219846525 . T . LowDepth;LowGQ END=219846674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,0:1:0:0:0,0,0:0,0,0:3,0 chr2 219846675 . G . PASS END=219846682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 219846683 . G . PASS END=219846703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,263:0,21,255:9,0 chr2 219846704 . G . PASS END=219846737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:13,0 chr2 219846738 . G . PASS END=219846746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:15,0 chr2 219846747 . T . PASS END=219846748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219846749 . G . PASS END=219846753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 219846754 . G . PASS END=219846754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,582:0,15,255:15,0 chr2 219846755 . C . PASS END=219846765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 219846766 . T . PASS END=219846766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 219846767 . G . PASS END=219846771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 219846772 . T . PASS END=219846772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 219846773 . C . PASS END=219846784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:16:0,41,590:0,41,255:19,0 chr2 219846785 . G . PASS END=219846796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:21,0 chr2 219846797 . G . PASS END=219846867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:17:0,48,720:0,49,255:19,0 chr2 219846868 . G . PASS END=219846868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr2 219846869 . G . PASS END=219846875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 219846876 . A . PASS END=219846876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:16,0 chr2 219846877 . G . PASS END=219846893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr2 219846894 . C . PASS END=219846922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 219846923 . C . PASS END=219846959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,288:0,24,255:9,0 chr2 219846960 . A . PASS END=219846978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:6:0,15,225:0,18,225:6,0 chr2 219848953 . C . PASS END=219848968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:23,0 chr2 219848969 . G . PASS END=219848969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 219848970 . C . PASS END=219848991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,861:0,69,255:26,0 chr2 219848992 . T . PASS END=219848992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,766:0,39,255:25,0 chr2 219848993 . C . PASS END=219849008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:26,0 chr2 219849009 . A . PASS END=219849015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 219849016 . C . PASS END=219849019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 219849020 . G . PASS END=219849020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 219849021 . A . PASS END=219849024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,686:0,60,255:20,0 chr2 219849025 . G . PASS END=219849027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 219849746 . C . PASS END=219849752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr2 219849753 . G . PASS END=219849753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 219849754 . T . PASS END=219849773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 219849774 . C . PASS END=219849774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 219849775 . T . PASS END=219849776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 219849777 . G . PASS END=219849777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:15,0 chr2 219849778 . G . PASS END=219849787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr2 219849788 . T . PASS END=219849788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,529:0,17,255:14,0 chr2 219849789 . C . PASS END=219849797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 219854974 . C . PASS END=219854976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,947:0,75,255:25,0 chr2 219854977 . G . PASS END=219855009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,952:0,84,255:31,0 chr2 219855010 . A . PASS END=219855010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 219855011 . G . PASS END=219855079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:32:0,81,1215:0,96,255:39,0 chr2 219855080 . T . PASS END=219855080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 219855081 . A . PASS END=219855082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 219855083 . T . PASS END=219855096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,74,255:25,0 chr2 219855097 . G . PASS END=219855097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:21,0 chr2 219855098 . C . PASS END=219855115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:22,0 chr2 219855116 . A . PASS END=219855121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 219855574 . G . PASS END=219855582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:33:0,96,1440:0,99,255:34,0 chr2 219855583 . C . PASS END=219855583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1219:0,66,255:33,0 chr2 219855584 . T . PASS END=219855716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:97:35:0,97,1287:0,97,255:40,0 chr2 219856824 . C . PASS END=219856824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 219856825 . G . PASS END=219856830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,913:0,81,255:28,0 chr2 219856831 . A . PASS END=219856831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:27,0 chr2 219856832 . G . PASS END=219856854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1109:0,90,255:32,0 chr2 219856855 . T . PASS END=219856855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr2 219856856 . G . PASS END=219856869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:33:0,96,1440:0,99,255:35,0 chr2 219856870 . C . PASS END=219856870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1227:0,66,255:34,0 chr2 219856871 . T . PASS END=219856952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:33:0,84,1241:0,92,255:40,0 chr2 219856953 . A . PASS END=219856965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 219857738 . A . PASS END=219857742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 219857743 . G . PASS END=219857752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 219857753 . T . PASS END=219857753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,433:0,25,255:13,0 chr2 219857754 . T . PASS END=219857768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 219857769 . T . PASS END=219857769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 219857770 . G . PASS END=219857790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,674:0,44,255:19,0 chr2 219857791 . G . PASS END=219857797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:23,0 chr2 219857798 . G . PASS END=219857798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 219857799 . C . PASS END=219857801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219857802 . A . PASS END=219857802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 219857803 . G . PASS END=219857803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219857804 . T . PASS END=219857805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 219857806 . G . PASS END=219857809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,884:0,72,255:24,0 chr2 219857810 . A . PASS END=219857810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 219857811 . G . PASS END=219857812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219857813 . A . PASS END=219857813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:21,0 chr2 219857814 . G . PASS END=219857815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219857816 . C . PASS END=219857816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219857817 . G . PASS END=219857818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr2 219857819 . C . PASS END=219857819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:24,0 chr2 219857820 . A . PASS END=219857820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:23:26:0,23,831:0,23,255:23,0 chr2 219857821 . G . PASS END=219857821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,881:0,45,255:23,0 chr2 219857822 . C . PASS END=219857822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,870:0,61,255:24,0 chr2 219857823 . G . PASS END=219857825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:22:26:0,22,756:0,22,255:22,0 chr2 219857826 . G . PASS END=219857826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,928:0,48,255:21,0 chr2 219857827 . G . PASS END=219857827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:22,0 chr2 219857828 . C . PASS END=219857828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:6:28:0,6,867:0,6,255:21,0 chr2 219857829 . C . PASS END=219857829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:23,0 chr2 219857830 . C . LowGQ END=219857830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,729:18,0,255:21,0 chr2 219857831 . T . PASS END=219857831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:25,0 chr2 219857832 . G . LowGQ END=219857835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,5:31:0:31:0,0,667:26,0,255:22,0 chr2 219857836 . G . PASS END=219857836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,809:0,15,255:25,0 chr2 219857837 . T . LowGQ END=219857837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,7:29:0:29:0,0,648:65,0,255:20,0 chr2 219857838 . C . PASS END=219857838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:15:29:0,15,831:0,15,255:24,0 chr2 219857839 . C . LowGQ END=219857839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,5:29:0:29:0,0,684:18,0,255:22,0 chr2 219857840 . T . PASS END=219857840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,4:29:21:29:0,21,782:0,21,255:23,0 chr2 219857841 . C . PASS END=219857841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,893:0,54,255:25,0 chr2 219857842 . C . LowGQ END=219857844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,6:28:0:28:0,0,574:13,0,255:21,0 chr2 219857845 . G . PASS END=219857845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,833:0,51,255:24,0 chr2 219857846 . T . LowGQ END=219857846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,11:28:0:28:0,0,433:120,0,255:15,0 chr2 219857847 . C . PASS END=219857847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,881:0,67,255:25,0 chr2 219857848 . C . PASS END=219857848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,4:28:17:28:0,17,745:0,17,255:22,0 chr2 219857849 . C . LowGQ END=219857850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,5:28:0:27:0,0,488:13,0,255:21,0 chr2 219857851 . G . PASS END=219857851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:33:27:0,33,758:0,33,255:21,0 chr2 219857852 . A . LowGQ END=219857852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,5:27:0:27:0,0,570:39,0,255:18,0 chr2 219857853 . G . PASS END=219857853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 219857854 . C . LowGQ END=219857854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,8:26:0:26:0,0,402:121,0,255:15,0 chr2 219857855 . G . PASS END=219857855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,770:0,31,255:21,0 chr2 219857856 . T . PASS END=219857857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,3:26:28:26:0,28,678:0,28,255:19,0 chr2 219857858 . A . LowGQ END=219857858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,9:26:0:26:0,0,422:71,0,255:12,0 chr2 219857859 . G . PASS END=219857860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 219857861 . C . LowGQ END=219857862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,12:25:0:23:0,0,195:133,0,255:8,0 chr2 219857863 . G . PASS END=219857864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:17,0 chr2 219857865 . C . LowGQ END=219857865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,8:23:0:23:0,0,286:128,0,255:9,0 chr2 219857866 . G . PASS END=219857867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:51:23:0,51,765:0,52,255:16,0 chr2 219857868 . G . LowGQ END=219857873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,11:23:0:22:0,0,106:0,0,255:15,0 chr2 219857874 . G . PASS END=219857874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,491:0,16,255:14,0 chr2 219857875 . G . LowGQ END=219857879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,6:22:0:22:0,0,92:1,0,235:16,0 chr2 219857880 . G C, 0.39 DRAGENSnpHardQUAL DP=5;MQ=234.05;MQRankSum=1.231;ReadPosRankSum=0.358;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:3,2,0:0.400,0.000:5:1,1,0:2,1,0:11:24,0,41,35,50,84:87,0,255:10,0:3.8502e-01,1.0716e+01,5.5032e+01,4.5449e+01,9.5159e+01,9.8122e+01:0.00,34.77,37.77,34.77,69.54,37.77:0,3,0,2:2,1,1,1 chr2 219857881 . C . PASS END=219857881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,494:0,32,255:15,0 chr2 219857882 . G . LowGQ END=219857884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,8:22:0:22:0,0,135:28,0,217:15,0 chr2 219857885 . G . PASS END=219857885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,690:0,33,255:16,0 chr2 219857886 . G . PASS END=219857888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,50,255:17,0 chr2 219857889 . C . LowGQ END=219857889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,8:22:0:22:0,0,233:214,0,255:14,0 chr2 219857890 . G . PASS END=219857890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 219857891 . C . LowGQ END=219857892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,8:21:0:21:0,0,291:112,0,255:14,0 chr2 219857893 . G . PASS END=219857893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 219857894 . C . PASS END=219857894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,596:0,13,255:17,0 chr2 219857895 . T . LowGQ END=219857898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,6:21:0:21:0,0,385:9,0,255:17,0 chr2 219867659 . T . PASS END=219867661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 219867662 . C . PASS END=219867662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:18,0 chr2 219867663 . G . PASS END=219867668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,692:0,57,255:19,0 chr2 219867669 . T . PASS END=219867669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 219867670 . C . PASS END=219867671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:20:0,47,737:0,47,255:19,0 chr2 219867672 . G . PASS END=219867677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 219867678 . A . PASS END=219867678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,739:0,35,255:19,0 chr2 219867679 . G . PASS END=219867682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219867683 . C . PASS END=219867727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,676:0,41,255:19,0 chr2 219867728 . G . PASS END=219867733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr2 219867734 . G . PASS END=219867734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 219867735 . G . PASS END=219867743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,695:0,63,255:21,0 chr2 219867857 . C . PASS END=219867889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,568:0,51,255:19,0 chr2 219867890 . C . PASS END=219867902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:23,0 chr2 219867903 . T . PASS END=219867903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 219867904 . G . PASS END=219867905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 219867906 . G . PASS END=219867921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 219867922 . G . PASS END=219867966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr2 219867967 . C . PASS END=219867973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr2 219867974 . A . PASS END=219867974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,721:0,32,255:18,0 chr2 219867975 . G . PASS END=219867994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,643:0,40,255:19,0 chr2 219868674 . C . PASS END=219868679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,825:0,69,255:25,0 chr2 219868680 . A . PASS END=219868680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 219868681 . T . PASS END=219868688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:26,0 chr2 219868689 . T . PASS END=219868700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1111:0,87,255:32,0 chr2 219868701 . T . PASS END=219868701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:31,0 chr2 219868702 . C . PASS END=219868868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:83:31:0,83,1164:0,83,255:40,0 chr2 219868869 . T . PASS END=219868869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,4:52:53:52:0,53,1512:0,53,255:40,0 chr2 219868870 . C . PASS END=219868898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,100,1646:0,100,255:40,0 chr2 219868899 . T . PASS END=219868899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,5:53:62:53:0,62,1649:0,62,255:40,0 chr2 219868900 . C . PASS END=219868907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:50:0,111,1660:0,111,255:40,2 chr2 219868908 . T . PASS END=219868908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:25:50:0,25,1426:0,25,255:40,2 chr2 219868909 . C . PASS END=219868909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:47:50:0,47,1552:0,47,255:40,2 chr2 219868910 . T . LowGQ END=219868910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,6:50:0:50:0,0,1242:37,0,255:40,2 chr2 219868911 . T . PASS END=219868911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,4:48:55:48:0,55,1466:0,55,255:40,0 chr2 219868912 . C . PASS END=219868928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,2:49:83:47:0,83,1483:0,83,255:40,0 chr2 219868929 . T . PASS END=219868929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1460:0,66,255:39,0 chr2 219868930 . T . PASS END=219868931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,101,1386:0,101,255:40,0 chr2 219868932 . T . PASS END=219868932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1437:0,68,255:37,0 chr2 219868933 . C . PASS END=219868969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:39:0,84,1267:0,84,255:40,0 chr2 219868970 . G . PASS END=219868970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:57:43:0,57,1410:0,57,255:33,0 chr2 219868971 . T . PASS END=219868994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,101,1433:0,101,255:39,0 chr2 219868995 . T . PASS END=219868995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:38,0 chr2 219868996 . G . PASS END=219869037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:35:0,84,1305:0,84,255:37,0 chr2 219869038 . G . PASS END=219869038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 219869039 . G . PASS END=219869047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:92:34:0,92,1264:0,92,255:35,0 chr2 219869048 . T . PASS END=219869048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:34,0 chr2 219869049 . A . PASS END=219869106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:93:36:0,93,1244:0,95,255:37,0 chr2 219869107 . G . PASS END=219869107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1271:0,61,255:29,0 chr2 219869108 . G . PASS END=219869109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:36:0,81,1215:0,108,255:31,0 chr2 219869110 . A . PASS END=219869110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 219869111 . G . PASS END=219869136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:31,0 chr2 219869137 . G . PASS END=219869137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:29,0 chr2 219869138 . G . PASS END=219869155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1133:0,90,255:30,0 chr2 219869156 . G . PASS END=219869177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,68,255:26,0 chr2 219870156 . C . PASS END=219870164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,978:0,75,255:26,0 chr2 219870165 . G . PASS END=219870165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219870166 . T . PASS END=219870166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 219870167 . G . PASS END=219870278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1041:0,82,255:33,0 chr2 219870279 . A . PASS END=219870280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 219870281 . C . PASS END=219870337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1178:0,83,255:32,0 chr2 219870338 . G . PASS END=219870338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 219870339 . G . PASS END=219870346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr2 219870347 . A . PASS END=219870347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 219870348 . G . PASS END=219870348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 219870349 . C . PASS END=219870360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,77,255:24,0 chr2 219870743 . C . PASS END=219870743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219870744 . G . PASS END=219870744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 219870745 . G . PASS END=219870746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 219870747 . G . PASS END=219870747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 219870748 . C . PASS END=219870759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 219870760 . G . PASS END=219870760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,692:0,24,255:20,0 chr2 219870761 . G . PASS END=219870780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 219870781 . A . PASS END=219870781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 219870782 . G . PASS END=219870786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 219870787 . A . PASS END=219870787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:20,0 chr2 219870788 . A . PASS END=219870806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr2 219870807 . C . PASS END=219870807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219870808 . T . PASS END=219870821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,44,255:19,0 chr2 219870822 . C . PASS END=219870824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:17:0,39,585:0,51,255:13,0 chr2 219870825 . G . PASS END=219870834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr2 219870835 . G . PASS END=219870847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:13:0,32,495:0,32,255:14,0 chr2 219870848 . G . PASS END=219870901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:18,0 chr2 219870902 . G . PASS END=219870902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 219870903 . C . PASS END=219870904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 219870905 . G . PASS END=219870905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 219870906 . G . PASS END=219870922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,560:0,48,255:16,0 chr2 219870923 . T . PASS END=219870923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 219870924 . G . PASS END=219870925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 219870926 . T . PASS END=219870929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,535:0,31,255:13,0 chr2 219870930 . T . PASS END=219870931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 219870932 . A . PASS END=219870942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:12,0 chr2 219870943 . T . PASS END=219870943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:9,0 chr2 219870944 . G . PASS END=219870944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 219870945 . T . PASS END=219870945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 219871187 . C . PASS END=219871231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,114,1710:0,114,255:40,0 chr2 219873769 . C . PASS END=219873769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 219873770 . T . PASS END=219873791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr2 219873792 . T . PASS END=219873794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219873795 . A . PASS END=219873795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,909:0,67,255:26,0 chr2 219873796 . C . PASS END=219873862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:30:0,86,1064:0,86,255:35,0 chr2 219873863 . T . PASS END=219873863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1092:0,66,255:29,0 chr2 219873864 . G . PASS END=219873876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:31,0 chr2 219874069 . C . PASS END=219874070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:16,0 chr2 219874071 . T . PASS END=219874071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 219874072 . G . PASS END=219874073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 219874074 . A . PASS END=219874074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 219874075 . T . PASS END=219874079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 219874080 . G . PASS END=219874112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,754:0,62,255:26,0 chr2 219874113 . C . PASS END=219874127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:29,0 chr2 219874128 . C . PASS END=219874128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 219874129 . A . PASS END=219874141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,86,255:29,0 chr2 219874142 . T . PASS END=219874142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,976:0,70,255:25,0 chr2 219874143 . C . PASS END=219874148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219874149 . G . PASS END=219874167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,862:0,61,255:26,0 chr2 219874168 . G . PASS END=219874168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 219874169 . G . PASS END=219874182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 219874664 . C . PASS END=219874785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:30:0,84,1260:0,85,255:40,0 chr2 219874786 . G . PASS END=219874786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 219874787 . A . PASS END=219874788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 219874789 . A . PASS END=219874789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:28,0 chr2 219874790 . C . PASS END=219874792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1131:0,57,255:28,0 chr2 219874793 . G . PASS END=219874807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:25:0,63,945:0,68,255:26,0 chr2 219875268 . C . PASS END=219875269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr2 219875270 . G . PASS END=219875286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:30,0 chr2 219875287 . C . PASS END=219875287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 219875288 . T . PASS END=219875305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:31:0,89,1127:0,89,255:35,0 chr2 219875306 . T . PASS END=219875306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1225:0,53,255:31,0 chr2 219875307 . G . PASS END=219875426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:80:32:0,80,1155:0,80,255:39,0 chr2 219875527 . C . PASS END=219875527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 219875528 . G . PASS END=219875543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,961:0,65,255:26,0 chr2 219875544 . C . PASS END=219875545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 219875546 . A . PASS END=219875546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 219875547 . T . PASS END=219875547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219875548 . A . PASS END=219875548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:26,0 chr2 219875549 . G . PASS END=219875549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219875550 . G . PASS END=219875556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,952:0,70,255:26,0 chr2 219875557 . G . PASS END=219875557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219875558 . A . PASS END=219875558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1048:0,79,255:29,0 chr2 219875559 . T . PASS END=219875561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1178:0,93,255:31,0 chr2 219875562 . A . PASS END=219875562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:30,0 chr2 219875563 . C . PASS END=219875566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1103:0,93,255:31,0 chr2 219875567 . A . PASS END=219875567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1026:0,79,255:31,0 chr2 219875568 . C . PASS END=219875695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:32:0,80,1139:0,80,255:40,0 chr2 219875696 . C . PASS END=219875709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:24:0,60,900:0,72,255:24,0 chr2 219875710 . C . PASS END=219875710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:20,0 chr2 219875711 . T . PASS END=219875712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219875713 . A . PASS END=219875713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr2 219875714 . T . PASS END=219875717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219875718 . T . PASS END=219875718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 219877981 . C . PASS END=219878091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,120,1800:0,134,255:40,0 chr2 219878241 . C . PASS END=219878286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:41:0,99,1575:0,99,255:40,0 chr2 219878287 . T . PASS END=219878287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1457:0,76,255:35,0 chr2 219878288 . C . PASS END=219878307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1294:0,92,255:36,0 chr2 219878590 . C . PASS END=219878622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,574:0,45,255:18,0 chr2 219878623 . G . PASS END=219878624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 219878625 . A . PASS END=219878625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 219878626 . C . PASS END=219878640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 219878641 . T . PASS END=219878644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 219878645 . G . PASS END=219878650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:23,0 chr2 219878651 . T . PASS END=219878651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 219878652 . G . PASS END=219878658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 219878659 . A . PASS END=219878659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,760:0,52,255:22,0 chr2 219878660 . G . PASS END=219878678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,815:0,66,255:22,0 chr2 219878679 . C . PASS END=219878709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,675:0,47,255:19,0 chr2 219878710 . G . PASS END=219878710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 219878711 . C . PASS END=219878715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 219878716 . T . PASS END=219878730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,482:0,39,255:13,0 chr2 219878731 . A . PASS END=219878731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 219878732 . C . PASS END=219878733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 219878734 . T . PASS END=219878734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 219878735 . C . PASS END=219878750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 219878751 . T . LowGQ END=219878751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr2 219878752 . G . PASS END=219878753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 219878754 . A . PASS END=219878754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 219878755 . A . PASS END=219878761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 219878762 . A . PASS END=219878762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 219878763 . G . PASS END=219878765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,495:0,32,255:11,0 chr2 219878766 . C . PASS END=219878766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:10,0 chr2 219883718 . T . PASS END=219883724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 219883725 . C . PASS END=219883758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:29,0 chr2 219883759 . C . PASS END=219883759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 219883760 . C . PASS END=219883854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,93,255:40,0 chr2 219883855 . T . PASS END=219883855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:33,0 chr2 219883856 . G . PASS END=219883862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:35:0,90,1278:0,92,255:33,0 chr2 219883863 . A . PASS END=219883863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1192:0,72,255:29,0 chr2 219883864 . G . PASS END=219883869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,105,255:29,0 chr2 219883870 . A . PASS END=219883881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:30:0,66,990:0,71,255:26,0 chr2 219883882 . C . PASS END=219883883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:42:27:0,42,940:0,42,255:23,2 chr2 219883884 . G . PASS END=219883896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr2 219883897 . T . PASS END=219883897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 219883898 . C . PASS END=219883900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 219883901 . G . PASS END=219883901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 219884228 . C . PASS END=219884245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 219884246 . T . PASS END=219884287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr2 219884288 . C . PASS END=219884293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 219884294 . A . PASS END=219884294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:14,0 chr2 219884295 . G . PASS END=219884304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,566:0,45,255:16,0 chr2 219884305 . A . PASS END=219884305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 219884306 . G . PASS END=219884328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,675:0,44,255:19,0 chr2 219884329 . C . PASS END=219884329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 219884330 . C . PASS END=219884349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,637:0,54,255:19,0 chr2 219884350 . G . PASS END=219884394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr2 219884395 . C . PASS END=219884426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:19,0 chr2 219884427 . C . PASS END=219884429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 219884430 . C . PASS END=219884441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 219885874 . C . PASS END=219885876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1291:0,108,255:36,0 chr2 219885877 . T . PASS END=219885877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:52:36:0,52,1077:0,52,255:34,0 chr2 219885878 . G . PASS END=219885982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:36:0,101,1319:0,101,255:40,0 chr2 219885983 . T . PASS END=219885983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:34,0 chr2 219885984 . G . PASS END=219886002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,89,255:35,0 chr2 219886502 . C . PASS END=219886651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:31:0,81,1215:0,93,255:40,0 chr2 219886652 . C . PASS END=219886652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1116:0,63,255:27,0 chr2 219886893 . A . PASS END=219886898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,800:0,66,255:25,0 chr2 219886899 . G . PASS END=219886899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 219886900 . C . PASS END=219886904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 219886905 . G . PASS END=219886930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1047:0,84,255:30,0 chr2 219886931 . G . PASS END=219886931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:27,0 chr2 219886932 . C . PASS END=219887001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1109:0,80,255:31,0 chr2 219887002 . T . PASS END=219887025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:22:0,60,900:0,66,255:26,0 chr2 219887026 . A . PASS END=219887038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,52,255:18,0 chr2 219887039 . T . PASS END=219887039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:17,0 chr2 219887040 . C . PASS END=219887050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr2 219887051 . T . PASS END=219887051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219887929 . A . PASS END=219887932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 219887933 . C . PASS END=219887933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 219887934 . T . PASS END=219887941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 219887942 . G . PASS END=219887947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:17,0 chr2 219887948 . A . PASS END=219887949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 219887950 . T . PASS END=219887950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 219887951 . A . PASS END=219887951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 219887952 . G . PASS END=219887958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 219887959 . G . PASS END=219887959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 219887960 . G . PASS END=219887990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,673:0,41,255:19,0 chr2 219887991 . G . PASS END=219888024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:26,0 chr2 219888025 . A . PASS END=219888153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1057:0,84,255:37,0 chr2 219888737 . C . PASS END=219888738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,728:0,69,255:23,0 chr2 219888739 . T . PASS END=219888739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:35:23:0,35,609:0,35,255:21,0 chr2 219888740 . G . PASS END=219888792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,728:0,62,255:26,0 chr2 219888793 . A . PASS END=219888794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 219888795 . C . PASS END=219888798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 219888799 . C . PASS END=219888818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 219888819 . A . PASS END=219888819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 219888820 . G . PASS END=219888821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 219888822 . A . PASS END=219888832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 219888833 . G . PASS END=219888846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 219888847 . C . PASS END=219888862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:24:0,63,945:0,72,255:24,0 chr2 219888863 . C . PASS END=219888863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:18,0 chr2 219888864 . C . PASS END=219888869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 219888870 . A . PASS END=219888870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 219888871 . T . PASS END=219888871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 219888872 . G . PASS END=219888877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 219888878 . T . PASS END=219888882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 219888883 . C . PASS END=219888884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:22:0,53,798:0,53,255:19,0 chr2 219888885 . C . PASS END=219888885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 219888886 . T . PASS END=219888886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:20,0 chr2 219888887 . C . PASS END=219888895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 219888896 . C . PASS END=219888927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,645:0,54,255:19,0 chr2 219888928 . T . PASS END=219888928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 219888929 . G . PASS END=219888932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 219888933 . A . PASS END=219888969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,372:0,30,255:13,0 chr2 219888970 . C . PASS END=219888982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,327:0,27,255:9,0 chr2 219890744 . C . PASS END=219890761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,811:0,72,255:26,0 chr2 219890762 . A . PASS END=219890851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:30:0,81,1088:0,83,255:37,0 chr2 219890852 . C . PASS END=219890852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1078:0,69,255:25,0 chr2 219890853 . T . PASS END=219890853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219890854 . C . PASS END=219890869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:25,0 chr2 219890870 . G . PASS END=219890881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:22:0,48,720:0,66,255:19,0 chr2 219892195 . C . PASS END=219892349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:29:0,81,1125:0,81,255:40,0 chr2 219892350 . C . PASS END=219892350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1312:0,70,255:33,0 chr2 219892351 . C . PASS END=219892352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1308:0,92,255:35,0 chr2 219892353 . T . PASS END=219892353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1150:0,61,255:33,0 chr2 219892354 . C . PASS END=219892355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1243:0,91,255:35,0 chr2 219892356 . C . PASS END=219892356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:33,0 chr2 219892357 . A . PASS END=219892368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,89,255:33,0 chr2 219892369 . C . PASS END=219892384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:28:0,60,900:0,68,255:26,0 chr2 219892385 . A . PASS END=219892385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219892386 . A . PASS END=219892397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:68:28:0,68,1014:0,68,255:26,0 chr2 219892398 . C . PASS END=219892400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:28,0 chr2 219892401 . C . PASS END=219892413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:26:0,78,955:0,78,255:26,0 chr2 219892414 . G . PASS END=219892414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1007:0,81,255:27,0 chr2 219892415 . T . PASS END=219892416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,893:0,64,255:25,0 chr2 219892417 . G . PASS END=219892425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 219892426 . C . PASS END=219892426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 219892427 . G . PASS END=219892438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 219892439 . A . PASS END=219892439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 219892440 . G . PASS END=219892443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219892444 . C . PASS END=219892445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 219892446 . T . PASS END=219892461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1125:0,80,255:31,0 chr2 219892462 . T . PASS END=219892462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:29,0 chr2 219892463 . G . PASS END=219892463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219892464 . G . PASS END=219892464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:29,0 chr2 219892465 . G . PASS END=219892465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219892466 . G . PASS END=219892466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 219892467 . G . PASS END=219892500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1164:0,83,255:31,0 chr2 219892501 . G . PASS END=219892502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 219892503 . A . PASS END=219892503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219892504 . G . PASS END=219892504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:26,0 chr2 219892505 . T . PASS END=219892506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 219892507 . A . PASS END=219892507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:26,0 chr2 219892508 . G . PASS END=219892508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 219892509 . A . PASS END=219892536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,923:0,64,255:25,0 chr2 219892537 . G . PASS END=219892537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 219892538 . C . PASS END=219892552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,901:0,75,255:25,0 chr2 219892553 . A . PASS END=219892553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 219892554 . T . PASS END=219892555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 219892556 . A . PASS END=219892556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 219892557 . G . PASS END=219892558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 219892559 . C . PASS END=219892560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 219892561 . C . PASS END=219892565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,65,255:21,0 chr2 219892566 . G . PASS END=219892566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:20,0 chr2 219892567 . T . PASS END=219892573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,64,255:22,0 chr2 219892574 . T . PASS END=219892574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:20,0 chr2 219892575 . T . PASS END=219892577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 219892578 . G . PASS END=219892587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,753:0,49,255:19,0 chr2 219892588 . C . PASS END=219892588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:18,0 chr2 219892589 . C . PASS END=219892596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,629:0,40,255:19,0 chr2 219892597 . G . PASS END=219892597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:15,0 chr2 219892598 . G . PASS END=219892598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,568:0,5,255:15,0 chr2 219892599 . C . PASS END=219892601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:17,0 chr2 219892602 . C . PASS END=219892602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,566:0,2,255:15,0 chr2 219892603 . G . PASS END=219892603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,621:0,40,255:16,0 chr2 219892604 . A . PASS END=219892604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:2:19:0,2,596:0,2,255:15,0 chr2 219892605 . A . PASS END=219892606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 219892607 . T . PASS END=219892607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,521:0,37,255:16,0 chr2 219892608 . C . PASS END=219892609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 219892610 . A . PASS END=219892610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 219892611 . C . PASS END=219892612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 219892613 . T . PASS END=219892613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,544:0,37,255:17,0 chr2 219892614 . C . PASS END=219892614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:16,0 chr2 219892615 . G . PASS END=219892615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 219892616 . A . PASS END=219892616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 219892617 . C . PASS END=219892617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 219892618 . A . PASS END=219892618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,535:0,21,255:14,0 chr2 219892619 . G . PASS END=219892619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 219892620 . G . PASS END=219892620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,596:0,13,255:16,0 chr2 219892621 . C . PASS END=219892623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 219892624 . T . PASS END=219892624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:8:21:0,8,651:0,8,255:15,0 chr2 219892625 . A . PASS END=219892626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:17,0 chr2 219892627 . A . PASS END=219892627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:15,0 chr2 219892628 . C . PASS END=219892631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,576:0,40,255:17,0 chr2 219892632 . T . PASS END=219892632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,545:0,23,255:16,0 chr2 219892633 . G . PASS END=219892633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:15,0 chr2 219892634 . G . PASS END=219892642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:18:0,41,651:0,41,255:18,0 chr2 219892643 . A . PASS END=219892643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,580:0,24,255:16,0 chr2 219892644 . A . PASS END=219892644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,593:0,54,255:18,0 chr2 219892645 . G . PASS END=219892646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 219892647 . T . PASS END=219892648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,625:0,57,255:19,0 chr2 219892649 . G . PASS END=219892650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,634:0,60,255:20,0 chr2 219892651 . T . PASS END=219892651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,568:0,13,255:18,0 chr2 219892652 . A . PASS END=219892663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,639:0,44,255:19,0 chr2 219892664 . C . PASS END=219892664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,570:0,18,255:18,0 chr2 219892665 . C . PASS END=219892671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,706:0,57,255:19,0 chr2 219892672 . G . PASS END=219892672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,668:0,29,255:17,0 chr2 219892673 . A . PASS END=219892678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,562:0,43,255:18,0 chr2 219892679 . T . PASS END=219892679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,513:0,24,255:16,0 chr2 219892680 . C . PASS END=219892682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:17,0 chr2 219892683 . T . PASS END=219892683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:26:20:0,26,515:0,26,255:16,0 chr2 219892684 . C . PASS END=219892688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,510:0,43,255:17,0 chr2 219892689 . G . PASS END=219892689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr2 219892690 . G . PASS END=219892718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,630:0,41,255:18,0 chr2 219892719 . T . PASS END=219892719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:17,0 chr2 219892720 . G . PASS END=219892731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 219892923 . C . PASS END=219892946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,590:0,48,255:18,0 chr2 219892947 . G . PASS END=219892949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219892950 . C . PASS END=219892951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 219892952 . G . PASS END=219892974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,771:0,66,255:24,0 chr2 219892975 . T . PASS END=219892975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 219892976 . T . PASS END=219892980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,922:0,72,255:26,0 chr2 219892981 . A . PASS END=219892981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,916:0,47,255:25,0 chr2 219892982 . T . PASS END=219893115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:81:27:0,81,986:0,81,255:40,0 chr2 219893116 . A . PASS END=219893116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1374:0,79,255:38,0 chr2 219893117 . G . PASS END=219893130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:43:0,85,1444:0,85,255:40,0 chr2 219893131 . A . PASS END=219893131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,5:45:1:45:0,1,1274:0,1,255:34,0 chr2 219893132 . T . PASS END=219893132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:99:45:0,114,1710:0,118,255:38,0 chr2 219894125 . C . PASS END=219894125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 219894126 . T . PASS END=219894128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 219894129 . T . PASS END=219894132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 219894133 . G . PASS END=219894138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 219894139 . G . PASS END=219894139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 219894140 . A . PASS END=219894140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,721:0,49,255:21,0 chr2 219894141 . C . PASS END=219894162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:24,0 chr2 219894163 . T . PASS END=219894163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 219894164 . G . PASS END=219894166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,884:0,72,255:24,0 chr2 219894167 . G . PASS END=219894167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 219894168 . G . PASS END=219894170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 219894171 . T . PASS END=219894171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 219894172 . G . PASS END=219894175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,937:0,75,255:25,0 chr2 219894176 . G . PASS END=219894184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:29,0 chr2 219894185 . G . PASS END=219894185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 219894186 . G . PASS END=219894280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:32:0,84,1057:0,86,255:37,0 chr2 219894281 . G . PASS END=219894281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:34,0 chr2 219894282 . T . PASS END=219894314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:33,0 chr2 219894315 . A . PASS END=219894316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 219894317 . G . PASS END=219894317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 219894318 . G . PASS END=219894359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:20:0,60,701:0,60,255:25,0 chr2 219894360 . A . PASS END=219894385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,44,255:17,0 chr2 219894386 . A . PASS END=219894390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 219894708 . C . PASS END=219894710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219894711 . T . PASS END=219894711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:28,0 chr2 219894712 . A . PASS END=219894713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 219894714 . A . PASS END=219894714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 219894715 . G . PASS END=219894783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1033:0,83,255:39,0 chr2 219894784 . T . PASS END=219894784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1405:0,79,255:37,0 chr2 219894785 . C . PASS END=219894842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:90:36:0,90,1208:0,90,255:40,0 chr2 219894843 . G . PASS END=219894843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:40,0 chr2 219894844 . C . PASS END=219894924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:33:0,81,1188:0,83,255:40,0 chr2 219894925 . A . PASS END=219894930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,83,255:25,0 chr2 219895411 . C . PASS END=219895416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:19,0 chr2 219895417 . C . PASS END=219895417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 219895418 . G . PASS END=219895418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 219895419 . G . PASS END=219895422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:24,0 chr2 219895423 . G . PASS END=219895445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:28:0,80,1049:0,80,255:35,0 chr2 219895446 . A . PASS END=219895446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1219:0,74,255:34,0 chr2 219895447 . G . PASS END=219895495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:35:0,80,1319:0,80,255:37,0 chr2 219895496 . T . PASS END=219895496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:34,0 chr2 219895497 . C . PASS END=219895510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1310:0,92,255:36,0 chr2 219895511 . T . PASS END=219895527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:31:0,82,1133:0,82,255:33,0 chr2 219895528 . T . PASS END=219895528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1092:0,55,255:27,0 chr2 219895529 . A . PASS END=219895531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 219895532 . C . PASS END=219895547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:26:0,71,1008:0,71,255:25,0 chr2 219895548 . C A, 41.93 PASS DP=26;MQ=248.85;MQRankSum=3.972;ReadPosRankSum=3.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,8,0:0.308,0.000:26:8,2,0:10,6,0:42:77,0,50,286,578,864:232,0,255:16,0:4.1931e+01,3.0029e-04,5.3000e+01,2.8618e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,3,5:12,6,5,3 chr2 219895549 . G . PASS END=219895556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,898:0,62,255:24,0 chr2 219895828 . C . PASS END=219895854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,637:0,51,255:19,0 chr2 219895855 . T . PASS END=219895878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:26,0 chr2 219895879 . A . PASS END=219895880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219895881 . C . PASS END=219895885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 219895886 . G . PASS END=219895925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1103:0,80,255:31,0 chr2 219895926 . G . PASS END=219895942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:64:27:0,64,862:0,64,255:26,0 chr2 219895943 . G . PASS END=219895953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 219895954 . G . PASS END=219895960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 219895961 . G . PASS END=219895996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1111:0,80,255:33,0 chr2 219895997 . G . PASS END=219895997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:28,0 chr2 219895998 . A . PASS END=219896001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,957:0,87,255:29,0 chr2 219896002 . C . PASS END=219896002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 219896003 . C . PASS END=219896004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 219896005 . A . PASS END=219896005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 219896006 . G . PASS END=219896009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219896010 . A . PASS END=219896027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:26,0 chr2 219896211 . C . PASS END=219896320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1141:0,80,255:34,0 chr2 219896321 . T . PASS END=219896335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:27:0,66,990:0,81,255:26,0 chr2 219896336 . C . PASS END=219896341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:42:26:0,42,855:0,42,255:19,0 chr2 219896342 . C . PASS END=219896343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 219896344 . C . PASS END=219896344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 219896345 . C . PASS END=219896345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 219896346 . G . PASS END=219896346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 219896347 . C . PASS END=219896369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr2 219896370 . A . PASS END=219896380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 219897192 . C . PASS END=219897262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:44:0,120,1800:0,122,255:40,0 chr2 219897263 . T . PASS END=219897263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1565:0,77,255:36,0 chr2 219897264 . G . PASS END=219897294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:36:0,95,1349:0,95,255:38,0 chr2 219900054 . T . PASS END=219900067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:50:0,120,1800:0,140,255:40,0 chr2 219900068 . C T, 49.55 PASS DP=56;MQ=250.00;MQRankSum=6.399;ReadPosRankSum=0.320;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,26,0:0.464,0.000:56:12,9,0:18,17,0:48:84,0,50,922,1065,1987:255,0,255:29,0:4.9551e+01,6.9893e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:20,10,14,12:16,14,15,11 chr2 219900069 . G . PASS END=219900105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,152,255:40,0 chr2 219900106 . A . PASS END=219900386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:90:33:0,90,1249:0,99,255:40,0 chr2 219903097 . C . PASS END=219903097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:17,0 chr2 219903098 . T . PASS END=219903098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 219903099 . G . PASS END=219903106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 219903107 . A . PASS END=219903107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,590:0,20,255:15,0 chr2 219903108 . T . PASS END=219903116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,668:0,51,255:18,0 chr2 219903117 . A . PASS END=219903117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,620:0,23,255:17,0 chr2 219903118 . G . PASS END=219903121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:19,0 chr2 219903122 . C . PASS END=219903131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 219903132 . C . PASS END=219903135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 219903136 . G . PASS END=219903137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219903138 . T . PASS END=219903138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 219903139 . G . PASS END=219903139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219903140 . T . PASS END=219903141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219903142 . G . PASS END=219903182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:25,0 chr2 219903183 . A . PASS END=219903194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:30,0 chr2 219903195 . T . PASS END=219903195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 219903196 . C . PASS END=219903196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 219903197 . A . PASS END=219903197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 219903198 . C . PASS END=219903220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1260:0,93,255:34,0 chr2 219903221 . G . PASS END=219903257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:33,0 chr2 219903258 . T G, 146.32 PASS DP=33;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,22,0:0,11,0:96:184,99,0,1279,99,1279:255,99,0:0,0:1.4632e+02,9.6321e+01,0.0000e+00,4.5000e+02,1.3109e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,15:0,0,17,16 chr2 219903259 . G . PASS END=219903259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 219903260 . T . PASS END=219903283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:23:0,69,884:0,69,255:26,0 chr2 219903284 . G . PASS END=219903284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,814:0,30,255:20,0 chr2 219903285 . C . PASS END=219903290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 219903291 . G . PASS END=219903295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:21:0,51,765:0,63,255:18,0 chr2 219903296 . T . PASS END=219903300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:15,0 chr2 219903618 . C . PASS END=219903685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:44:0,120,1800:0,122,255:40,0 chr2 219903686 . G . PASS END=219903722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:59:0,120,1800:0,145,255:40,0 chr2 219903723 . C T, 227.58 PASS DP=60;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,60,0:1.000,0.000:60:0,31,0:0,29,0:178:265,181,0,2310,181,2310:255,183,0:0,0:2.2758e+02,1.7758e+02,0.0000e+00,4.5000e+02,2.1235e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,33:0,0,30,30 chr2 219903724 . A . PASS END=219903772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:47:0,120,1800:0,127,255:40,0 chr2 219905187 . T . PASS END=219905187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:145,1:146:99:146:0,120,1800:0,255,255:40,0 chr2 219905241 . C . PASS END=219905246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:168,2:170:99:169:0,120,1800:0,255,255:40,0 chr2 219905247 . T C, 49.62 PASS DP=171;MQ=249.99;MQRankSum=11.229;ReadPosRankSum=5.105;FractionInformativeReads=0.994;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:91,79,0:0.465,0.000:170:49,35,0:42,44,0:48:84,0,50,2804,3091,5895:255,0,255:40,0:4.9625e+01,6.9116e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.4853e+02:0.00,34.77,37.77,34.77,69.54,37.77:52,39,33,46:48,43,41,38 chr2 219905248 . T . PASS END=219905284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:162,0:162:99:156:0,120,1800:0,255,255:40,0 chr2 219905285 . A . PASS END=219905286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:157,0:157:99:157:0,120,1800:0,255,255:40,0 chr2 219906210 . A . PASS END=219906210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 219906211 . T . PASS END=219906233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1210:0,86,255:36,0 chr2 219906234 . T . PASS END=219906234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:75:37:0,75,1125:0,111,255:25,0 chr2 219919305 . C . PASS END=219919305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 219919333 . C . PASS END=219919333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 219919506 . C . PASS END=219919506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 219919532 . C . PASS END=219919532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 219919561 . C . PASS END=219919561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219919616 . G . PASS END=219919616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 219919629 . A . PASS END=219919629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219919662 . T . PASS END=219919662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 219919683 . C . PASS END=219919683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 219919712 . C . PASS END=219919712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219919730 . C . PASS END=219919730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 219919896 . C . PASS END=219919896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 219919929 . T . PASS END=219919938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,886:0,72,255:24,0 chr2 219919939 . G . PASS END=219919939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 219919940 . C . PASS END=219919954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:28:0,71,1069:0,71,255:26,0 chr2 219919955 . G . PASS END=219919964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1100:0,87,255:29,0 chr2 219919965 . G . PASS END=219919965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 219919966 . C . PASS END=219919980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,981:0,87,255:29,0 chr2 219919981 . A . PASS END=219919999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,948:0,65,255:26,0 chr2 219920000 . A . PASS END=219920005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:67:26:0,67,909:0,67,255:26,0 chr2 219920006 . G . PASS END=219920006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:22,0 chr2 219920007 . C . PASS END=219920036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,908:0,61,255:26,0 chr2 219920037 . A G, 127.81 PASS DP=27;MQ=248.48;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,15,0:0,12,0:78:166,81,0,1007,81,1007:255,81,0:0,0:1.2781e+02,7.7807e+01,0.0000e+00,4.5000e+02,1.1258e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,14:0,0,15,12 chr2 219920038 . G . PASS END=219920047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:25,0 chr2 219920048 . C . PASS END=219920058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:56:24:0,56,843:0,56,255:19,0 chr2 219920059 . C . PASS END=219920059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 219920060 . T . PASS END=219920060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 219920061 . G . PASS END=219920067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 219920068 . A . PASS END=219920068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 219920069 . G . PASS END=219920074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,778:0,66,255:22,0 chr2 219920075 . G . PASS END=219920082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,876:0,72,255:24,0 chr2 219920083 . A . PASS END=219920083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr2 219920084 . A . PASS END=219920091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,75,255:22,0 chr2 219920092 . T . PASS END=219920092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:18,0 chr2 219920093 . G . PASS END=219920093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:20,0 chr2 219920094 . A . PASS END=219920097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:21,0 chr2 219920098 . A . PASS END=219920098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,765:0,36,255:19,0 chr2 219920099 . G . PASS END=219920108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,821:0,66,255:22,0 chr2 219920109 . A . PASS END=219920109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr2 219920110 . G . PASS END=219920111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 219920112 . C . PASS END=219920112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 219920113 . A . PASS END=219920125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:23,0 chr2 219920126 . A . PASS END=219920126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 219920127 . G . PASS END=219920127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 219920128 . G . PASS END=219920128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 219920129 . A . PASS END=219920129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,790:0,30,255:20,0 chr2 219920130 . T . PASS END=219920131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 219920132 . C . PASS END=219920132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:20,0 chr2 219920133 . C . PASS END=219920133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 219920134 . A . PASS END=219920139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 219920140 . T . PASS END=219920140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,746:0,30,255:19,0 chr2 219920141 . C . PASS END=219920141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 219920142 . C . PASS END=219920142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:19,0 chr2 219920143 . T . PASS END=219920143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219920144 . C . PASS END=219920144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,775:0,27,255:19,0 chr2 219920145 . C . PASS END=219920147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 219920148 . C . LowGQ END=219920148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,604:9,0,255:16,0 chr2 219920149 . A . PASS END=219920149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 219920150 . C . PASS END=219920151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,645:0,21,255:18,0 chr2 219920152 . A . PASS END=219920157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:41:19:0,41,651:0,41,255:17,0 chr2 219920158 . C . PASS END=219920158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,615:0,26,255:13,0 chr2 219920159 . C . PASS END=219920162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,621:0,40,255:14,0 chr2 219920163 . C . PASS END=219920163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:13,0 chr2 219920164 . T . PASS END=219920164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,446:0,17,255:13,0 chr2 219920165 . T . PASS END=219920167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:12,0 chr2 219920168 . T . PASS END=219920168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:12,0 chr2 219920169 . G . PASS END=219920170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:12,0 chr2 219920171 . G . PASS END=219920171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 219920172 . C . PASS END=219920173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 219920174 . G . PASS END=219920174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,496:0,6,255:13,0 chr2 219920175 . G . PASS END=219920178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 219920179 . T . PASS END=219920179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 219920180 . A . PASS END=219920180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,451:0,11,255:12,0 chr2 219920181 . G . PASS END=219920193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr2 219920194 . A . PASS END=219920194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:15,0 chr2 219920195 . C . PASS END=219920197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 219920198 . G . PASS END=219920198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:14,0 chr2 219920199 . T . PASS END=219920201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 219920202 . A . PASS END=219920202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 219920203 . G . PASS END=219920212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 219920213 . C . PASS END=219920213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,574:0,12,255:15,0 chr2 219920214 . C . PASS END=219920217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 219920218 . C . PASS END=219920218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 219920219 . G . PASS END=219920221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 219920222 . C . PASS END=219920222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 219920223 . A . PASS END=219920257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:19,0 chr2 219920258 . A . PASS END=219920258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,612:0,16,255:17,0 chr2 219920259 . C . PASS END=219920260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:21,0 chr2 219920261 . G . PASS END=219920261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,670:0,46,255:20,0 chr2 219920262 . G . PASS END=219920268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 219920269 . T . PASS END=219920269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:20,0 chr2 219920270 . G . PASS END=219920273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 219920274 . G . PASS END=219920274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 219920275 . T . PASS END=219920278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 219920279 . T . PASS END=219920279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 219920280 . G . PASS END=219920280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 219920281 . G . PASS END=219920282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,745:0,49,255:21,0 chr2 219920283 . A . PASS END=219920284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,795:0,69,255:23,0 chr2 219920285 . A . PASS END=219920285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,643:0,19,255:20,0 chr2 219920286 . T . PASS END=219920286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,739:0,38,255:22,0 chr2 219920287 . G . PASS END=219920287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 219920288 . T . PASS END=219920288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr2 219920289 . G . PASS END=219920289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,743:0,14,255:21,0 chr2 219920290 . G . PASS END=219920290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 219920291 . C . PASS END=219920291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 219920292 . C . PASS END=219920294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,864:0,72,255:24,0 chr2 219920295 . G . PASS END=219920295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:23,0 chr2 219920296 . A . PASS END=219920296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 219920297 . A . PASS END=219920299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 219920300 . G . PASS END=219920300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 219920301 . G . PASS END=219920305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,854:0,72,255:24,0 chr2 219920306 . C . PASS END=219920306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 219920307 . C . PASS END=219920312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,929:0,62,255:23,0 chr2 219920313 . C . PASS END=219920313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:21,0 chr2 219920314 . G . PASS END=219920325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:25:0,67,986:0,67,255:25,0 chr2 219920326 . G . PASS END=219920326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 219920327 . C . PASS END=219920330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 219920331 . A . PASS END=219920331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 219920332 . A . PASS END=219920350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:24:0,62,922:0,62,255:25,0 chr2 219920351 . T . PASS END=219920351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,914:0,47,255:24,0 chr2 219920352 . G . PASS END=219920354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,921:0,62,255:24,0 chr2 219920355 . T . PASS END=219920355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,770:0,45,255:21,0 chr2 219920356 . G . PASS END=219920374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr2 219920375 . C . PASS END=219920383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:25,0 chr2 219920384 . C . PASS END=219920396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:28,0 chr2 219920397 . G . PASS END=219920408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1069:0,71,255:26,0 chr2 219920409 . G . PASS END=219920411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 219920412 . A G, 50.00 PASS DP=28;MQ=250.00;MQRankSum=4.468;ReadPosRankSum=2.902;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:6,6,0:7,9,0:48:85,0,50,508,434,941:255,0,255:12,0:5.0000e+01,6.6786e-05,5.2680e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,6,5,10:6,7,8,7 chr2 219920413 . G . PASS END=219920418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 219920419 . C . PASS END=219920420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 219920421 . G . PASS END=219920423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219920424 . C . PASS END=219920442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,937:0,62,255:26,0 chr2 219920443 . C . PASS END=219920444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 219920445 . G . PASS END=219920449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 219920450 . T . PASS END=219920462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,954:0,67,255:26,0 chr2 219920463 . C . PASS END=219920467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr2 219920468 . C . PASS END=219920468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 219920469 . C . PASS END=219920478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 219920479 . A . PASS END=219920479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:29,0 chr2 219920480 . C . PASS END=219920484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 219920485 . T . PASS END=219920485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1046:0,77,255:27,0 chr2 219920486 . C . PASS END=219920505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1103:0,90,255:31,0 chr2 219920506 . A . PASS END=219920511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:31:0,75,1125:0,93,255:26,0 chr2 219920512 . A . PASS END=219920521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1215:0,86,255:28,0 chr2 219920522 . C . PASS END=219920524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1055:0,74,255:26,0 chr2 219920525 . T . PASS END=219920525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,955:0,57,255:23,0 chr2 219920526 . C . PASS END=219920527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:75:32:0,75,1125:0,79,255:26,0 chr2 219920528 . C . PASS END=219920564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,878:0,72,255:25,0 chr2 219920565 . C T, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.113;ReadPosRankSum=2.202;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,13,0:0.542,0.000:24:6,4,0:5,9,0:48:85,0,50,465,393,858:255,0,255:11,0:5.0000e+01,6.7045e-05,5.2640e+01,4.5000e+02,4.2820e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,4,4,9:4,7,9,4 chr2 219920566 . G . PASS END=219920568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 219920569 . T . PASS END=219920569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 219920570 . T . PASS END=219920579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,878:0,72,255:24,0 chr2 219920580 . C . PASS END=219920580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 219920581 . G . PASS END=219920583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 219920584 . T . PASS END=219920584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:19,0 chr2 219920585 . G . PASS END=219920585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 219920586 . C . PASS END=219920587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 219922141 . C . PASS END=219922141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 219922152 . C . PASS END=219922152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 219922155 . C . PASS END=219922193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 219922194 . A . PASS END=219922232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:18,0 chr2 219922233 . C . PASS END=219922233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 219922234 . C . PASS END=219922241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:17,0 chr2 219922242 . C . PASS END=219922255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,482:0,39,255:13,0 chr2 219922256 . T . PASS END=219922256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 219922257 . C . PASS END=219922261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,482:0,39,255:13,0 chr2 219922262 . T . PASS END=219922262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 219922263 . C . PASS END=219922305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,443:0,36,255:13,0 chr2 219922306 . C . PASS END=219922307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:12:0,27,405:0,36,255:9,0 chr2 219922308 . C . PASS END=219922312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 219922313 . G . PASS END=219922317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr2 219922318 . G . PASS END=219922333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,349:0,30,255:10,0 chr2 219922334 . C . PASS END=219922347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:8,0 chr2 219922348 . C . PASS END=219922353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 219922354 . C . PASS END=219922354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,247:0,7,247:6,0 chr2 219922355 . T . PASS END=219922356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 219922357 . C . PASS END=219922385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,233:0,21,233:7,0 chr2 219922386 . T . PASS END=219922396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 219922397 . T . PASS END=219922397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,1:6:1:6:0,1,177:0,1,177:5,0 chr2 219922398 . T . PASS END=219922416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,166:6,0 chr2 219924875 . C . PASS END=219925017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:32:0,86,1166:0,86,255:40,0 chr2 219925018 . C . PASS END=219925021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:66:33:0,66,1125:0,66,255:25,0 chr2 219925022 . C . PASS END=219925026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1127:0,82,255:28,0 chr2 219925027 . T . PASS END=219925037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:30:0,60,900:0,79,255:24,0 chr2 219925038 . T . PASS END=219925038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:19,0 chr2 219925039 . G . PASS END=219925045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr2 219925046 . G . PASS END=219925054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,766:0,50,255:19,0 chr2 219925055 . C . PASS END=219925056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 219925057 . C . PASS END=219925064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr2 219925065 . C . PASS END=219925082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:21,0 chr2 219925083 . C . PASS END=219925083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 219925084 . T . PASS END=219925091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,731:0,63,255:21,0 chr2 219925092 . A . PASS END=219925092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr2 219925093 . C . PASS END=219925107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr2 219925108 . A . PASS END=219925108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 219925109 . G . PASS END=219925124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:24,0 chr2 219925125 . A . PASS END=219925125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,825:0,36,255:23,0 chr2 219925126 . C . PASS END=219925126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 219925127 . C . PASS END=219925127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:22,0 chr2 219925128 . A . PASS END=219925131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 219925132 . G . PASS END=219925132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:19,0 chr2 219925133 . C . PASS END=219925136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 219925137 . A . PASS END=219925137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:19,0 chr2 219925138 . G . PASS END=219925139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 219925140 . A . PASS END=219925150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,759:0,47,255:19,0 chr2 219925151 . G . PASS END=219925151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr2 219925152 . C . PASS END=219925160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:18:0,40,607:0,40,255:18,0 chr2 219925161 . A . PASS END=219925161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr2 219925162 . G . PASS END=219925163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 219925164 . C . PASS END=219925169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,574:0,34,255:13,0 chr2 219925170 . C . PASS END=219925178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr2 219925179 . G . PASS END=219925189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 219925203 . G . PASS END=219925203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 219941042 . T . PASS END=219941062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,120,1800:0,131,255:40,0 chr2 219941063 . G A, 211.60 PASS DP=55;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,55,0:1.000,0.000:55:0,30,0:0,25,0:162:249,165,0,2042,165,2042:255,165,0:0,0:2.1160e+02,1.6160e+02,0.0000e+00,4.5000e+02,1.9637e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,32,23:0,0,21,34 chr2 219941064 . T . PASS END=219941100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:99:55:0,120,1800:0,165,255:40,0 chr2 219941101 . G . PASS END=219941177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:42:0,111,1665:0,113,255:40,0 chr2 219941965 . C . PASS END=219941965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1396:0,108,255:36,0 chr2 219941968 . C . PASS END=219942082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:87:36:0,87,1305:0,95,255:40,1 chr2 219942083 . T . PASS END=219942083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,909:0,35,255:25,0 chr2 219942084 . C . PASS END=219942086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1241:0,86,255:29,0 chr2 219942796 . C . PASS END=219942928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:94:37:0,94,1304:0,94,255:40,0 chr2 219942930 . T . PASS END=219942930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 219959996 . C . PASS END=219960077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,99,1571:0,99,255:40,0 chr2 220011402 . C . PASS END=220011460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:125,0:125:99:105:0,120,1800:0,247,255:40,0 chr2 220011462 . T . PASS END=220011462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:105,0:105:99:105:0,120,1800:0,255,255:40,0 chr2 220012370 . T . PASS END=220012370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 220012379 . C . PASS END=220012381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 220012382 . G . PASS END=220012382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1132:0,63,255:30,0 chr2 220012383 . A . PASS END=220012383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 220012384 . A . PASS END=220012384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1029:0,63,255:29,0 chr2 220012385 . T . PASS END=220012502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:83:32:0,83,1154:0,83,255:40,0 chr2 220012503 . C . PASS END=220012508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:69:32:0,69,1035:0,96,255:26,0 chr2 220012509 . T . PASS END=220012509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:22,0 chr2 220012510 . T . PASS END=220012517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:65:26:0,65,976:0,65,255:23,0 chr2 220022193 . C . PASS END=220022199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 220022200 . A . PASS END=220022200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 220022201 . G . PASS END=220022202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220022203 . A . PASS END=220022203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,926:0,70,255:27,0 chr2 220022204 . C . PASS END=220022210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1160:0,87,255:34,0 chr2 220022211 . G . PASS END=220022211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:32,0 chr2 220022212 . C . PASS END=220022213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1235:0,102,255:34,0 chr2 220022214 . T . PASS END=220022397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:95:34:0,95,1197:0,95,255:40,0 chr2 220022398 . G . PASS END=220022407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:39:0,108,1620:0,117,255:38,0 chr2 220022905 . T . PASS END=220022905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 220022908 . C . PASS END=220022908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 220022909 . T . PASS END=220022909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,504:0,9,255:15,0 chr2 220022910 . T . PASS END=220022924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,596:0,48,255:19,0 chr2 220022925 . C . PASS END=220022930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:24,0 chr2 220022931 . T . PASS END=220022931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 220022932 . A . PASS END=220022934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,923:0,75,255:26,0 chr2 220022935 . G . PASS END=220022942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 220022943 . G . PASS END=220022943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 220022944 . T . PASS END=220022964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1050:0,82,255:33,0 chr2 220022965 . A . PASS END=220022965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1047:0,63,255:30,0 chr2 220022966 . T . PASS END=220023000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:33:0,86,1217:0,86,255:35,0 chr2 220023001 . A . PASS END=220023001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1103:0,72,255:33,0 chr2 220023002 . A . PASS END=220023063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:32:0,81,1141:0,82,255:39,0 chr2 220023064 . G . PASS END=220023084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 220026631 . T . PASS END=220026634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:13,0 chr2 220026635 . T . PASS END=220026635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 220026636 . T . PASS END=220026662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,437:0,39,255:13,0 chr2 220026663 . A . PASS END=220026663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,450:0,28,255:12,0 chr2 220026664 . T . PASS END=220026667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220026668 . G . PASS END=220026668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220026669 . G . PASS END=220026669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 220026670 . G . PASS END=220026677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220026678 . C . PASS END=220026681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220026682 . T . PASS END=220026687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 220026688 . A . PASS END=220026688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 220026689 . G . PASS END=220026693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220026694 . C . PASS END=220026695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 220026696 . A . PASS END=220026698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220026699 . C . PASS END=220026712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 220026713 . G . PASS END=220026713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 220026714 . G . PASS END=220026719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,568:0,48,255:18,0 chr2 220026720 . A . PASS END=220026734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,725:0,60,255:22,0 chr2 220026735 . C . PASS END=220026735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 220026736 . A . PASS END=220026758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:23:0,62,931:0,62,255:26,0 chr2 220026759 . G . PASS END=220026858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:27:0,81,1016:0,81,255:37,0 chr2 220026859 . C . PASS END=220026859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 220026860 . A . PASS END=220026864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220026865 . A . PASS END=220026892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:24,0 chr2 220026893 . A . PASS END=220026893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220026894 . G . PASS END=220026897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220026898 . T . PASS END=220026922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,53,255:20,0 chr2 220026923 . G . PASS END=220026926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,930:0,72,255:24,0 chr2 220027021 . C . PASS END=220027099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:81:37:0,81,1215:0,111,255:40,0 chr2 220027100 . A . PASS END=220027100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:35:0,78,1170:0,105,255:26,0 chr2 220027101 . T . PASS END=220027106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1153:0,80,255:27,0 chr2 220027107 . G . PASS END=220027116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 220028110 . C . PASS END=220028111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 220028112 . G . PASS END=220028129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1000:0,81,255:35,0 chr2 220028130 . G . PASS END=220028130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 220028131 . C . PASS END=220028268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:84:35:0,84,1241:0,89,255:40,0 chr2 220028269 . G . PASS END=220028269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:26,0 chr2 220028270 . C . PASS END=220028276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 220028277 . C . PASS END=220028277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:72:33:0,72,1080:0,99,255:24,0 chr2 220028955 . C . PASS END=220029060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:32:0,87,1299:0,96,255:40,0 chr2 220029891 . C . PASS END=220029893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:19,0 chr2 220029894 . G . PASS END=220029901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220029902 . C . PASS END=220029902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,623:0,43,255:19,0 chr2 220029903 . C . PASS END=220029906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 220029907 . T . PASS END=220029907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,653:0,43,255:19,0 chr2 220029908 . T . PASS END=220029929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,686:0,60,255:24,0 chr2 220029930 . T . PASS END=220029930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 220029931 . G . PASS END=220029956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,941:0,75,255:26,0 chr2 220029957 . C . PASS END=220029958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220029959 . C . PASS END=220029969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1053:0,71,255:25,0 chr2 220029970 . C . PASS END=220029975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220029976 . A . PASS END=220029997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 220029998 . G . PASS END=220030045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr2 220030046 . A . PASS END=220030048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,585:0,37,255:13,0 chr2 220030049 . G . PASS END=220030052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:15,0 chr2 220030053 . A . PASS END=220030053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:14,0 chr2 220030054 . T . PASS END=220030058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr2 220030059 . G . PASS END=220030085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr2 220030086 . G . PASS END=220030089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220030090 . A . PASS END=220030090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 220030091 . T . PASS END=220030113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,272:0,24,255:9,0 chr2 220030114 . C . PASS END=220030116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 220030117 . G . PASS END=220030144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,294:0,24,255:9,0 chr2 220032652 . C . PASS END=220032662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:26,0 chr2 220032663 . A . PASS END=220032688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,1024:0,81,255:35,0 chr2 220032689 . G . PASS END=220032689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:34,0 chr2 220032690 . G . PASS END=220032695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 220032696 . A . PASS END=220032696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1211:0,66,255:32,0 chr2 220032697 . G . PASS END=220032741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:35:0,96,1382:0,101,255:39,0 chr2 220032742 . A . PASS END=220032742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:78:36:0,78,1326:0,78,255:32,0 chr2 220032743 . C . PASS END=220032766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1260:0,92,255:34,0 chr2 220032917 . C . PASS END=220033040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:38:0,81,1215:0,84,255:40,0 chr2 220033374 . A . PASS END=220033412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,568:0,41,255:19,0 chr2 220033413 . A . PASS END=220033430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:23,0 chr2 220033431 . A . PASS END=220033431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,699:0,52,255:22,0 chr2 220033432 . G . PASS END=220033454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,892:0,72,255:24,0 chr2 220033455 . G . PASS END=220033455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 220033456 . C . PASS END=220033466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:24,0 chr2 220033467 . G . PASS END=220033467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 220033468 . G . PASS END=220033525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,721:0,60,255:25,0 chr2 220033526 . C . PASS END=220033527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 220033528 . G . PASS END=220033528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr2 220033529 . C . PASS END=220033542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 220033543 . C . PASS END=220033554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,739:0,63,255:22,0 chr2 220033555 . C . PASS END=220033555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 220033751 . C . PASS END=220033754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 220033755 . T . PASS END=220033755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 220033756 . G . PASS END=220033761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:30,0 chr2 220033762 . A . PASS END=220033762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,975:0,60,255:28,0 chr2 220033763 . A . PASS END=220033792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1111:0,90,255:38,0 chr2 220033793 . A . PASS END=220033824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:33:0,86,1217:0,86,255:36,0 chr2 220034007 . C . PASS END=220034128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:37:0,99,1449:0,101,255:40,0 chr2 220034243 . C . PASS END=220034255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1164:0,93,255:31,0 chr2 220034256 . A . PASS END=220034256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:31,0 chr2 220034257 . A . PASS END=220034400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:80:32:0,80,1057:0,80,255:40,0 chr2 220034545 . C . PASS END=220034559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:25,0 chr2 220034560 . A . PASS END=220034561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:42:25:0,42,784:0,42,255:23,0 chr2 220034562 . A . PASS END=220034573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,945:0,62,255:25,0 chr2 220034574 . A . PASS END=220034574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 220034575 . A . PASS END=220034619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr2 220034620 . C . PASS END=220034620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220034621 . T . PASS END=220034622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220034623 . G . PASS END=220034629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220034630 . G . PASS END=220034631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220034632 . T . PASS END=220034632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220034633 . G . PASS END=220034653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:24,0 chr2 220034654 . T . PASS END=220034654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,839:0,44,255:21,0 chr2 220034655 . C . PASS END=220034661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 220034662 . G . PASS END=220034662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 220034663 . C . PASS END=220034675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 220034676 . G . PASS END=220034706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,50,255:19,0 chr2 220037308 . C . PASS END=220037311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:13,0 chr2 220037312 . C . PASS END=220037350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,559:0,45,255:19,0 chr2 220037351 . A . PASS END=220037352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 220037353 . A . PASS END=220037355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220037356 . G . PASS END=220037363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,696:0,44,255:19,0 chr2 220037364 . A . PASS END=220037392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 220037393 . A G, 71.46 PASS DP=21;MQ=250.00;MQRankSum=1.569;ReadPosRankSum=1.404;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:1,20,0:0.952,0.000:21:1,11,0:0,9,0:21:109,24,0,737,60,773:255,24,0:1,0:7.1465e+01,2.1465e+01,3.1106e-02,4.5000e+02,9.1995e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,1,10,10:0,1,11,9 chr2 220037394 . G . PASS END=220037405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr2 220037406 . A . PASS END=220037407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220037408 . G . PASS END=220037421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,715:0,60,255:20,0 chr2 220037422 . C . PASS END=220037422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:18,0 chr2 220037423 . A . PASS END=220037432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220037433 . T . PASS END=220037433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220037434 . A . PASS END=220037434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,737:0,27,255:19,0 chr2 220037435 . T . PASS END=220037441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,50,255:19,0 chr2 220037442 . A . PASS END=220037443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 220037444 . G A, 50.00 PASS DP=25;MQ=250.00;MQRankSum=4.133;ReadPosRankSum=-0.083;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,15,0:0.600,0.000:25:5,5,0:5,10,0:48:85,0,48,478,342,820:255,0,255:5,0:5.0000e+01,7.7141e-05,5.1107e+01,4.5000e+02,3.7641e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,5,7,8:4,6,7,8 chr2 220037445 . G . PASS END=220037470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,668:0,54,255:18,0 chr2 220037471 . C . PASS END=220037471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,692:0,32,255:17,0 chr2 220037472 . G . PASS END=220037481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:18:0,54,653:0,54,255:18,0 chr2 220037482 . G . PASS END=220037487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 220037488 . G . PASS END=220037488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 220037489 . G . PASS END=220037489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 220037490 . C . PASS END=220037490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 220037491 . A . PASS END=220037495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 220037496 . A . LowGQ END=220037496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:0:20:0,0,557:12,0,255:16,0 chr2 220037497 . G . PASS END=220037501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,631:0,43,255:19,0 chr2 220037502 . G . PASS END=220037504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,664:0,60,255:20,0 chr2 220037505 . A . PASS END=220037505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,644:0,43,255:19,0 chr2 220037506 . G . PASS END=220037506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220037507 . T . PASS END=220037509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,652:0,43,255:19,0 chr2 220037510 . C . PASS END=220037517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220037518 . C . PASS END=220037518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,637:0,30,255:18,0 chr2 220037519 . T . PASS END=220037520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 220037521 . C . PASS END=220037521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 220037522 . T . PASS END=220037524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220037525 . C . PASS END=220037525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,612:0,27,255:18,0 chr2 220037526 . A . PASS END=220037526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 220037527 . A . PASS END=220037527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220037528 . A . PASS END=220037528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:12:20:0,12,426:0,12,255:17,0 chr2 220037529 . G . PASS END=220037531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220037532 . G . PASS END=220037533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220037534 . C . PASS END=220037534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,657:0,30,255:16,0 chr2 220037535 . A . PASS END=220037547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:43:20:0,43,621:0,43,255:19,0 chr2 220037548 . A . LowGQ END=220037548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,550:9,0,255:16,0 chr2 220037549 . G . PASS END=220037551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,569:0,43,255:19,0 chr2 220037552 . G . PASS END=220037552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,620:0,13,255:17,0 chr2 220037553 . G . PASS END=220037566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,623:0,43,255:19,0 chr2 220037567 . T . PASS END=220037567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,551:0,13,255:16,0 chr2 220037568 . C . PASS END=220037587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,673:0,41,255:19,0 chr2 220037588 . G . PASS END=220037588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,629:0,18,255:18,0 chr2 220037589 . G . PASS END=220037600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:19,0 chr2 220037601 . C . PASS END=220037604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220037605 . A . PASS END=220037607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220037608 . A . PASS END=220037608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220037609 . C . PASS END=220037611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,836:0,53,255:19,0 chr2 220037612 . C . PASS END=220037620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:20,0 chr2 220037621 . G . PASS END=220037628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,637:0,43,255:18,0 chr2 220037629 . C . PASS END=220037637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 220037638 . G . PASS END=220037640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 220037641 . T . PASS END=220037641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:20,0 chr2 220037642 . T . PASS END=220037660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,754:0,63,255:23,0 chr2 220037661 . T . PASS END=220037661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,812:0,39,255:22,0 chr2 220037662 . A . PASS END=220037665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,856:0,72,255:24,0 chr2 220037666 . A G, 50.00 PASS DP=24;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=2.140;FractionInformativeReads=0.958;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:6,7,0:4,6,0:47:85,0,46,185,185,185:255,0,255:10,0:5.0000e+01,9.6297e-05,4.9146e+01,1.8477e+02,2.1954e+02,1.8778e+02:0.00,34.77,37.78,34.77,69.54,37.78:1,9,5,8:3,7,9,4 chr2 220037667 . G . PASS END=220037692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,900:0,61,255:26,0 chr2 220037693 . G . PASS END=220037696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 220037697 . T . PASS END=220037703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:77:28:0,77,1139:0,77,255:26,0 chr2 220037704 . C . PASS END=220037705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220037706 . C . PASS END=220037712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:28,0 chr2 220037713 . G . PASS END=220037713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 220037714 . C . PASS END=220037714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1070:0,84,255:28,0 chr2 220037715 . A . PASS END=220037715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:27,0 chr2 220037716 . A . PASS END=220037718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 220037719 . G . PASS END=220037724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1055:0,84,255:28,0 chr2 220037725 . C . PASS END=220037741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:26:0,69,963:0,74,255:26,0 chr2 220037742 . G . PASS END=220037744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 220037745 . C . PASS END=220037755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:27:0,63,945:0,65,255:23,0 chr2 220037756 . A G, 50.00 PASS DP=30;MQ=250.00;MQRankSum=4.476;ReadPosRankSum=2.970;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,19,0:0.633,0.000:30:8,8,0:3,11,0:46:85,0,45,667,383,1050:255,0,255:7,0:5.0000e+01,1.0743e-04,4.8312e+01,4.5000e+02,4.1775e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,8,10,9:4,7,15,4 chr2 220037757 . T . PASS END=220037765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,901:0,65,255:25,0 chr2 220037766 . G . PASS END=220037769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 220037770 . C . PASS END=220037770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 220037771 . A . PASS END=220037773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 220037774 . G . PASS END=220037793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,68,255:26,0 chr2 220037794 . C . PASS END=220037806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:24,0 chr2 220037807 . A . PASS END=220037825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:18:0,45,675:0,54,255:19,0 chr2 220037826 . A . PASS END=220037826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,611:0,38,255:16,0 chr2 220037827 . T . PASS END=220037831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,604:0,48,255:16,0 chr2 220037832 . C . PASS END=220037833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220037834 . G . PASS END=220037850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,607:0,51,255:17,0 chr2 220038072 . C . PASS END=220038072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,612:0,48,255:16,0 chr2 220038073 . T . PASS END=220038073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,551:0,20,255:16,0 chr2 220038074 . T . PASS END=220038074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 220038075 . T . PASS END=220038107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,643:0,51,255:19,0 chr2 220038108 . C . PASS END=220038118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,770:0,63,255:22,0 chr2 220038119 . G . PASS END=220038119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,761:0,35,255:21,0 chr2 220038120 . C . PASS END=220038129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,808:0,66,255:22,0 chr2 220038130 . A . PASS END=220038130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:18,0 chr2 220038131 . G . PASS END=220038153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:25,0 chr2 220038154 . T . PASS END=220038154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 220038155 . A . PASS END=220038158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 220038159 . G . PASS END=220038159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 220038160 . C . PASS END=220038171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 220038172 . C . PASS END=220038173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 220038174 . C . PASS END=220038178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220038179 . G . PASS END=220038186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 220038187 . A . PASS END=220038187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,688:0,30,255:16,0 chr2 220038188 . C . PASS END=220038189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:18,0 chr2 220038868 . C . PASS END=220038929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:40:0,102,1530:0,120,255:40,0 chr2 220039500 . C . PASS END=220039545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:19,0 chr2 220039546 . G . PASS END=220039560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,892:0,61,255:26,0 chr2 220039561 . G . PASS END=220039568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 220039569 . T . PASS END=220039570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,995:0,73,255:27,0 chr2 220039571 . C . PASS END=220039578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220039579 . A . PASS END=220039579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220039580 . A . PASS END=220039581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220039582 . A . PASS END=220039582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:20:30:0,20,895:0,20,255:26,0 chr2 220039583 . C . PASS END=220039583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:26,0 chr2 220039584 . C . PASS END=220039584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,984:0,54,255:25,0 chr2 220039585 . T . PASS END=220039585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220039586 . C . PASS END=220039586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,986:0,35,255:25,0 chr2 220039587 . C . PASS END=220039587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:26,0 chr2 220039588 . T . PASS END=220039588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220039589 . C . PASS END=220039589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:27,0 chr2 220039590 . C . PASS END=220039590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:27,0 chr2 220039591 . T . PASS END=220039591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220039592 . C . PASS END=220039593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:31:0,69,1123:0,69,255:29,0 chr2 220039594 . T . PASS END=220039598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:32:0,83,1148:0,83,255:30,0 chr2 220039599 . T . PASS END=220039599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1070:0,79,255:28,0 chr2 220039600 . T . PASS END=220039823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:84:32:0,84,1260:0,84,255:40,0 chr2 220039824 . T . PASS END=220039830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:31:0,72,1080:0,80,255:26,0 chr2 220040313 . C . PASS END=220040318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,803:0,69,255:23,0 chr2 220040319 . A . PASS END=220040320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,831:0,41,255:22,0 chr2 220040321 . A . PASS END=220040326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:25,0 chr2 220040327 . T . PASS END=220040327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:24,0 chr2 220040328 . A . PASS END=220040328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 220040329 . C . PASS END=220040329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220040330 . A G, 50.00 PASS DP=29;MQ=249.66;MQRankSum=4.468;ReadPosRankSum=2.718;FractionInformativeReads=0.966;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,15,0:0.536,0.000:28:5,6,0:8,9,0:48:85,0,50,536,465,1001:255,0,255:11,0:5.0000e+01,6.6786e-05,5.2686e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,3,6,9:4,9,7,8 chr2 220040331 . T . PASS END=220040331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1064:0,76,255:28,0 chr2 220040332 . A . PASS END=220040335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1072:0,90,255:30,0 chr2 220040336 . C . PASS END=220040337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 220040338 . T . PASS END=220040338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 220040339 . C . PASS END=220040339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 220040340 . T . PASS END=220040351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1074:0,90,255:31,0 chr2 220040352 . A . PASS END=220040352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 220040353 . T . PASS END=220040359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:30,0 chr2 220040360 . G . PASS END=220040367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 220040368 . C . PASS END=220040394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,756:0,66,255:25,0 chr2 220040945 . C . PASS END=220040965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,784:0,63,255:25,0 chr2 220040966 . C . PASS END=220040975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:28,0 chr2 220040976 . A . PASS END=220040976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 220040977 . C . PASS END=220040977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 220040978 . A . PASS END=220040978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:27,0 chr2 220040979 . G . PASS END=220040979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 220040980 . T . PASS END=220040980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 220040981 . C . PASS END=220040986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220040987 . C . PASS END=220041042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,862:0,66,255:24,0 chr2 220041043 . C . PASS END=220041053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 220041482 . C . PASS END=220041492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:91:36:0,91,1274:0,91,255:40,0 chr2 220041493 . G . PASS END=220041569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:34:0,81,1260:0,81,255:40,0 chr2 220043075 . A . PASS END=220043092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,111:0,12,111:5,0 chr2 220043093 . G . LowGQ END=220043093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:4,0 chr2 220043094 . G . PASS END=220043095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:6,0 chr2 220043096 . G . PASS END=220043128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,219:0,21,219:9,0 chr2 220043129 . G . PASS END=220043133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr2 220043134 . G . PASS END=220043134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 220043135 . A . LowGQ END=220043136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,304:0,0,255:10,0 chr2 220043137 . C . PASS END=220043140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 220043141 . G . PASS END=220043141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 220043142 . G . PASS END=220043143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,515:0,45,255:15,0 chr2 220043144 . C . LowGQ END=220043144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,426:2,0,255:13,0 chr2 220043145 . T . PASS END=220043147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,558:0,45,255:16,0 chr2 220043148 . G . PASS END=220043149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:16,0 chr2 220043150 . C . LowGQ END=220043150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:0:17:0,0,433:43,0,255:14,0 chr2 220043151 . T . PASS END=220043157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,601:0,51,255:18,0 chr2 220043158 . G . PASS END=220043158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,559:0,24,255:17,0 chr2 220043159 . A . PASS END=220043159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,660:0,57,255:19,0 chr2 220043160 . G . PASS END=220043160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,723:0,35,255:21,0 chr2 220043161 . C . PASS END=220043163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr2 220043164 . A . PASS END=220043164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:21,0 chr2 220043165 . G . PASS END=220043166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,756:0,66,255:22,0 chr2 220043167 . C . PASS END=220043167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,696:0,33,255:20,0 chr2 220043168 . A . PASS END=220043168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:21,0 chr2 220043169 . T . PASS END=220043169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:22,0 chr2 220043170 . G . PASS END=220043170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,690:0,11,255:20,0 chr2 220043171 . A . PASS END=220043171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 220043172 . G . PASS END=220043176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr2 220043177 . G . PASS END=220043177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,729:0,36,255:21,0 chr2 220043178 . C . PASS END=220043182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,780:0,69,255:24,0 chr2 220043183 . A . PASS END=220043183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,756:0,55,255:23,0 chr2 220043184 . G . PASS END=220043185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,878:0,72,255:24,0 chr2 220043186 . G . PASS END=220043186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 220043187 . A . PASS END=220043189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220043190 . C . PASS END=220043190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,693:0,39,255:20,0 chr2 220043191 . A . PASS END=220043192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:21,0 chr2 220043193 . A . PASS END=220043200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220043201 . G . PASS END=220043202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,709:0,49,255:21,0 chr2 220043203 . G . PASS END=220043203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 220043204 . G . PASS END=220043204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:18:22:0,18,631:0,18,255:20,0 chr2 220043205 . C . PASS END=220043207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 220043208 . C . PASS END=220043208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:20,0 chr2 220043209 . G . PASS END=220043211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220043212 . C . PASS END=220043212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 220043213 . G . PASS END=220043213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220043214 . A . PASS END=220043214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,660:0,33,255:18,0 chr2 220043215 . G . PASS END=220043218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 220043219 . G . PASS END=220043219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr2 220043220 . T . PASS END=220043225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,647:0,63,255:21,0 chr2 220043226 . G . PASS END=220043226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 220043227 . C . PASS END=220043228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,717:0,63,255:21,0 chr2 220043229 . T . PASS END=220043229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,639:0,46,255:19,0 chr2 220043230 . G . PASS END=220043232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220043233 . C . PASS END=220043233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:19,0 chr2 220043234 . A . PASS END=220043234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220043235 . C . PASS END=220043252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,720:0,44,255:19,0 chr2 220043253 . T . PASS END=220043253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,529:0,20,255:15,0 chr2 220043254 . C . PASS END=220043270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 220043271 . T . PASS END=220043274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220043275 . G . PASS END=220043289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 220043290 . G . PASS END=220043290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 220043291 . T . PASS END=220043291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220043292 . T . PASS END=220043298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 220043299 . G . PASS END=220043299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:9,0 chr2 220043300 . T . PASS END=220043303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:10,0 chr2 220043304 . A . PASS END=220043304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:9,0 chr2 220043305 . G . PASS END=220043309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:12,0 chr2 220043310 . C . PASS END=220043310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,463:0,26,255:11,0 chr2 220043311 . G . PASS END=220043314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:12,0 chr2 220043315 . C . PASS END=220043315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:11,0 chr2 220043316 . A . PASS END=220043316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 220043317 . C . PASS END=220043318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:11,0 chr2 220043319 . G . PASS END=220043319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 220043320 . C . PASS END=220043321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:22:13:0,22,396:0,22,255:11,0 chr2 220043322 . T . PASS END=220043325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 220043326 . C . PASS END=220043326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr2 220043327 . A . PASS END=220043334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:12,0 chr2 220043335 . C . PASS END=220043336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr2 220043337 . C . PASS END=220043337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220043338 . G . PASS END=220043338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 220043339 . C . PASS END=220043339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220043340 . T . PASS END=220043341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:10,0 chr2 220043342 . A . PASS END=220043343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220043344 . C . LowGQ END=220043344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:10,0 chr2 220043345 . G . PASS END=220043345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:10,0 chr2 220043346 . G . LowGQ END=220043346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,278:0,0,255:9,0 chr2 220043347 . C . PASS END=220043347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 220043348 . C . PASS END=220043351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,296:0,16,255:10,0 chr2 220043352 . T . PASS END=220043354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,352:0,33,255:11,0 chr2 220043355 . G . PASS END=220043355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 220043644 . G . PASS END=220043750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:53:0,119,1800:0,119,255:40,0 chr2 220043976 . C . PASS END=220043986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:56:0,120,1800:0,138,255:40,0 chr2 220044455 . C . PASS END=220044455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:33,0 chr2 220044456 . A . PASS END=220044458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1243:0,102,255:34,0 chr2 220044459 . A . PASS END=220044459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:33,0 chr2 220044460 . T . PASS END=220044485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1241:0,86,255:35,0 chr2 220044832 . T . PASS END=220044837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:35,0 chr2 220044838 . T . PASS END=220044838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1247:0,75,255:33,0 chr2 220044839 . G . PASS END=220044967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:86:36:0,86,1288:0,86,255:40,0 chr2 220045392 . T . PASS END=220045476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:44:0,120,1800:0,125,255:40,0 chr2 220045784 . T . PASS END=220045787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 220045788 . G . PASS END=220045788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220045789 . A . PASS END=220045789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220045790 . G . PASS END=220045845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:32:0,80,1155:0,80,255:38,0 chr2 220045846 . C . PASS END=220045846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr2 220045847 . G . PASS END=220045913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:32:0,84,1239:0,89,255:37,0 chr2 220045914 . A . PASS END=220045914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:26:31:0,26,747:0,26,255:26,0 chr2 220045915 . C . PASS END=220045916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 220045917 . C . PASS END=220045927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,76,255:26,0 chr2 220046091 . A . PASS END=220046091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220046092 . G . PASS END=220046097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 220046098 . G . PASS END=220046124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:31:0,88,1197:0,88,255:35,0 chr2 220046125 . T . PASS END=220046125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1302:0,70,255:34,0 chr2 220046126 . G . PASS END=220046164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:34:0,92,1235:0,92,255:37,0 chr2 220046165 . C . PASS END=220046165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 220046166 . T . PASS END=220046174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1219:0,88,255:32,0 chr2 220046175 . T . PASS END=220046175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1144:0,74,255:32,0 chr2 220046176 . C . PASS END=220046182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:32,0 chr2 220046183 . G . PASS END=220046185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 220046362 . G . PASS END=220046384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:24:0,62,876:0,62,255:26,0 chr2 220046385 . G . PASS END=220046386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220046387 . C . PASS END=220046388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220046389 . T . PASS END=220046390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,953:0,65,255:26,0 chr2 220046391 . G . PASS END=220046486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1215:0,80,255:37,0 chr2 220046487 . T . PASS END=220046497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,71,255:26,0 chr2 220046735 . A . PASS END=220046794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,568:0,48,255:19,0 chr2 220046795 . A . PASS END=220046798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,715:0,60,255:22,0 chr2 220046799 . A . PASS END=220046799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:20,0 chr2 220046800 . G . PASS END=220046802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 220046803 . G . PASS END=220046827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,884:0,69,255:24,0 chr2 220046828 . A . PASS END=220046828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:22,0 chr2 220046829 . C . PASS END=220046829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220046830 . C . PASS END=220046830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 220046831 . T . PASS END=220046839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:23,0 chr2 220046840 . G A, 50.00 PASS DP=23;MQ=250.00;MQRankSum=4.000;ReadPosRankSum=3.380;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:10,13,0:0.565,0.000:23:3,3,0:7,10,0:48:85,0,49,436,350,786:255,0,255:10,0:5.0000e+01,6.9375e-05,5.2247e+01,4.3623e+02,3.8445e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,4,8,5:1,9,6,7 chr2 220046841 . T . PASS END=220046865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:23:0,61,817:0,61,255:26,0 chr2 220046866 . C . PASS END=220046866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220046867 . T . PASS END=220046877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,946:0,65,255:25,0 chr2 220046878 . G . PASS END=220046884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,832:0,61,255:25,0 chr2 220046885 . A . PASS END=220046888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 220046889 . G . PASS END=220046889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 220046890 . G . PASS END=220046911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1048:0,87,255:31,0 chr2 220046912 . T . PASS END=220046912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 220046913 . G . PASS END=220046919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 220046920 . C . PASS END=220046921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1000:0,60,255:27,0 chr2 220046922 . C . PASS END=220046922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:28,0 chr2 220046923 . T . PASS END=220046923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1044:0,57,255:28,0 chr2 220046924 . C . PASS END=220046925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 220046926 . T . PASS END=220046928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 220046929 . C . PASS END=220046929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,972:0,38,255:26,0 chr2 220046930 . C . PASS END=220046930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220046931 . C . PASS END=220046931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:26,0 chr2 220046932 . C . PASS END=220046932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220046933 . T . PASS END=220046937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1017:0,73,255:26,0 chr2 220046938 . T . PASS END=220046959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:25:0,61,878:0,61,255:25,0 chr2 220046960 . G . PASS END=220046960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:23,0 chr2 220046961 . G . PASS END=220046973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 220046974 . C . PASS END=220046974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 220046975 . C A, 49.91 PASS DP=23;MQ=250.00;MQRankSum=4.031;ReadPosRankSum=4.031;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,11,0:0.478,0.000:23:4,4,0:8,7,0:48:85,0,50,393,405,799:255,0,255:10,0:4.9907e+01,6.6010e-05,5.3000e+01,3.9346e+02,4.4008e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,5,6:7,5,10,1 chr2 220046976 . A . PASS END=220046976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220046977 . G . PASS END=220046977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220046978 . A . PASS END=220046978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220046979 . T . PASS END=220046979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:20,0 chr2 220046980 . G . PASS END=220046997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 220046998 . G . PASS END=220047012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,53,255:19,0 chr2 220047013 . A . PASS END=220047019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:18:0,47,720:0,47,255:18,0 chr2 220047020 . G . PASS END=220047021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 220047022 . C . PASS END=220047027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 220047028 . A . PASS END=220047028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,529:0,34,255:14,0 chr2 220047029 . C . PASS END=220047031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 220047032 . T . PASS END=220047032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr2 220047033 . G . PASS END=220047041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 220047042 . C . PASS END=220047042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,490:0,31,255:13,0 chr2 220047043 . C . PASS END=220047047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220047048 . T . PASS END=220047048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220047049 . G . PASS END=220047068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,601:0,48,255:18,0 chr2 220047069 . A . PASS END=220047069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 220047070 . C . PASS END=220047094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,660:0,41,255:19,0 chr2 220047095 . A . PASS END=220047095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,574:0,15,255:16,0 chr2 220047096 . C . PASS END=220047098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 220047099 . A . PASS END=220047099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 220047100 . G . PASS END=220047105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,637:0,51,255:17,0 chr2 220047106 . T . PASS END=220047106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,515:0,34,255:16,0 chr2 220047107 . C . PASS END=220047110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,590:0,51,255:17,0 chr2 220047111 . T . PASS END=220047111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,476:0,34,255:16,0 chr2 220047112 . T . PASS END=220047112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:17,0 chr2 220047113 . C . PASS END=220047113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:17,0 chr2 220047114 . C . PASS END=220047115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,676:0,54,255:18,0 chr2 220047116 . T . LowGQ END=220047116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,468:2,0,255:15,0 chr2 220047117 . T . PASS END=220047118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 220047119 . T . PASS END=220047119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,568:0,37,255:16,0 chr2 220047120 . C . PASS END=220047136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,517:0,40,255:19,0 chr2 220047137 . A . PASS END=220047137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:10:19:0,10,567:0,10,255:16,0 chr2 220047138 . C . PASS END=220047138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:19:0,51,765:0,57,255:17,0 chr2 220047139 . T . PASS END=220047139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,556:0,24,255:13,0 chr2 220047140 . C . PASS END=220047149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,599:0,40,255:18,0 chr2 220047150 . C . PASS END=220047150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,696:0,30,255:17,0 chr2 220047151 . C . PASS END=220047151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 220047152 . T . PASS END=220047152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,515:0,24,255:16,0 chr2 220047153 . G . PASS END=220047153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220047154 . C . PASS END=220047154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:17,0 chr2 220047155 . C . PASS END=220047158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,605:0,40,255:19,0 chr2 220047159 . C . PASS END=220047160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,670:0,60,255:20,0 chr2 220047161 . C . PASS END=220047163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,623:0,43,255:19,0 chr2 220047164 . A . PASS END=220047164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220047165 . G . PASS END=220047165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,723:0,39,255:20,0 chr2 220047166 . G . PASS END=220047166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220047167 . A . PASS END=220047167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,828:0,42,255:21,0 chr2 220047168 . A . PASS END=220047168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220047169 . G . PASS END=220047169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 220047170 . A . PASS END=220047171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220047172 . G . PASS END=220047174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,776:0,55,255:23,0 chr2 220047175 . G . PASS END=220047175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220047176 . C . PASS END=220047176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,790:0,39,255:22,0 chr2 220047177 . A . PASS END=220047177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 220047178 . C . PASS END=220047209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:23:0,61,712:0,61,255:26,0 chr2 220047210 . G . PASS END=220047250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1124:0,84,255:32,0 chr2 220047251 . C . PASS END=220047251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1119:0,57,255:27,0 chr2 220047252 . A . PASS END=220047281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr2 220047282 . A . PASS END=220047282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220047283 . C . PASS END=220047285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220047286 . C . PASS END=220047296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:27:0,78,1170:0,81,255:26,0 chr2 220047297 . C . PASS END=220047297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 220047298 . A . PASS END=220047298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220047299 . T . PASS END=220047300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220047301 . C . PASS END=220047334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,861:0,69,255:26,0 chr2 220047335 . C . PASS END=220047351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 220071710 . A . PASS END=220071713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220071714 . A . PASS END=220071734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr2 220071735 . A . PASS END=220071737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 220071738 . G . PASS END=220071739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220071740 . T . PASS END=220071764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr2 220072049 . A . PASS END=220072058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:30,0 chr2 220072059 . G . PASS END=220072059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1041:0,66,255:29,0 chr2 220072060 . C . PASS END=220072143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1148:0,80,255:35,0 chr2 220072370 . G . PASS END=220072494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:86:33:0,86,1174:0,86,255:40,0 chr2 220072495 . A . PASS END=220072495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:77:37:0,77,1047:0,77,255:34,0 chr2 220072496 . C . PASS END=220072501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1335:0,95,255:37,0 chr2 220072609 . A . PASS END=220072618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:51:0,107,1772:0,107,255:40,0 chr2 220072619 . A . PASS END=220072619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,5:54:56:54:0,56,1556:0,56,255:40,0 chr2 220072620 . T . PASS END=220072728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,2:65:94:54:0,94,1793:0,94,255:40,0 chr2 220072729 . T . PASS END=220072764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:52:0,120,1800:0,135,255:40,0 chr2 220072978 . A . PASS END=220073074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:39:0,99,1485:0,117,255:40,0 chr2 220073148 . A . PASS END=220073380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:93:37:0,93,1305:0,93,255:40,0 chr2 220073699 . T . PASS END=220073703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1050:0,90,255:30,0 chr2 220073704 . A . PASS END=220073704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 220073705 . G . PASS END=220073715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1111:0,90,255:33,0 chr2 220073716 . A . PASS END=220073716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1154:0,69,255:32,0 chr2 220073717 . C . PASS END=220073769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1139:0,80,255:33,0 chr2 220073770 . A . PASS END=220073771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:31:0,72,1080:0,77,255:24,0 chr2 220073984 . G . PASS END=220073984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220073985 . C . PASS END=220073985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 220073986 . C . PASS END=220074011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,800:0,66,255:25,0 chr2 220074012 . A . PASS END=220074015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220074016 . C . PASS END=220074022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:73:27:0,73,1019:0,73,255:28,0 chr2 220074023 . T . PASS END=220074242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:30:0,80,1147:0,80,255:40,0 chr2 220074243 . G . PASS END=220074243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr2 220074244 . A . PASS END=220074252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 220074253 . A . PASS END=220074256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:30:0,63,945:0,90,255:26,0 chr2 220074257 . C . PASS END=220074260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,59,255:19,0 chr2 220074261 . C . PASS END=220074261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 220074262 . T . PASS END=220074266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:25:0,54,810:0,59,255:19,0 chr2 220074267 . G . PASS END=220074274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220074275 . A . PASS END=220074290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,43,255:19,0 chr2 220074291 . T . PASS END=220074294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:36:19:0,36,540:0,57,255:13,0 chr2 220074295 . C . PASS END=220074300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220074301 . C . PASS END=220074315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 220074316 . G . PASS END=220074344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,233:0,21,233:8,0 chr2 220074660 . T . PASS END=220074664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,923:0,75,255:25,0 chr2 220074665 . G . PASS END=220074768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:28:0,84,1047:0,84,255:40,0 chr2 220074952 . C . PASS END=220074952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220074953 . G . PASS END=220074953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:63:31:0,63,1124:0,63,255:28,0 chr2 220074954 . T . PASS END=220075008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1109:0,80,255:33,0 chr2 220075009 . A . PASS END=220075020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:60:28:0,60,1035:0,60,255:26,0 chr2 220075103 . C . PASS END=220075103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 220075104 . T . PASS END=220075104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 220075105 . G . PASS END=220075108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220075109 . G . PASS END=220075109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:19,0 chr2 220075110 . C . PASS END=220075130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:62:22:0,62,808:0,62,255:26,0 chr2 220075131 . T . PASS END=220075157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1000:0,81,255:29,0 chr2 220075158 . G . PASS END=220075158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 220075159 . G . PASS END=220075164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1041:0,84,255:28,0 chr2 220075165 . C . PASS END=220075165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:27,0 chr2 220075166 . C . PASS END=220075166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220075167 . T . PASS END=220075194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:60:23:0,60,848:0,61,255:26,0 chr2 220075195 . T . PASS END=220075195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr2 220075196 . G . PASS END=220075197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 220075431 . A . PASS END=220075431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1258:0,102,255:34,0 chr2 220075433 . C . PASS END=220075519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1194:0,86,255:40,0 chr2 220075520 . C . PASS END=220075545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,62,255:26,0 chr2 220075555 . T . PASS END=220075563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,860:0,69,255:23,0 chr2 220075656 . C . PASS END=220075663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:31,0 chr2 220075664 . A . PASS END=220075664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 220075665 . A . PASS END=220075734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:31:0,86,1148:0,86,255:40,0 chr2 220075735 . A . PASS END=220075735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,3:43:79:43:0,79,1356:0,79,255:37,0 chr2 220075736 . C . PASS END=220075798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1215:0,99,255:40,0 chr2 220075799 . C . PASS END=220075830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,65,255:26,0 chr2 220077109 . C . PASS END=220077209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:80:35:0,80,1215:0,80,255:40,0 chr2 220077210 . C . PASS END=220077210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 220077211 . C . PASS END=220077211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1039:0,57,255:24,0 chr2 220077212 . A . PASS END=220077213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:29:0,72,1080:0,87,255:24,0 chr2 220077730 . C . PASS END=220077787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:54:0,120,1800:0,144,255:40,0 chr2 220077963 . C . PASS END=220078048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:42:0,85,1463:0,85,255:40,0 chr2 220078161 . T . PASS END=220078225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,104,1419:0,104,255:40,0 chr2 220078312 . C . PASS END=220078388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:33:0,81,1194:0,83,255:38,0 chr2 220078548 . C . PASS END=220078673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:30:0,87,1096:0,90,255:40,0 chr2 220078843 . C . PASS END=220078848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:86:33:0,86,1201:0,86,255:34,0 chr2 220078849 . T . PASS END=220078849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:32,0 chr2 220078850 . T . PASS END=220078851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 220078852 . G . PASS END=220078852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:72:34:0,72,1249:0,72,255:32,0 chr2 220078853 . A . PASS END=220078908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:34:0,99,1435:0,102,255:40,0 chr2 220079111 . C . PASS END=220079220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:42:0,104,1607:0,104,255:40,0 chr2 220079683 . T . PASS END=220079707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,1031:0,81,255:34,0 chr2 220079708 . C . PASS END=220079708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1279:0,67,255:34,0 chr2 220079709 . A . PASS END=220079804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:35:0,86,1192:0,86,255:40,0 chr2 220080719 . C . PASS END=220080719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 220080720 . T . PASS END=220080720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 220080721 . G . PASS END=220080725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 220080726 . G . PASS END=220080727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 220080728 . C . PASS END=220080728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220080729 . C . PASS END=220080732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 220080733 . G . PASS END=220080733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220080734 . A . PASS END=220080744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,382:0,30,255:13,0 chr2 220080745 . G . PASS END=220080745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 220080746 . C . PASS END=220080750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220080751 . A . PASS END=220080751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 220080752 . T . PASS END=220080752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,473:0,11,255:12,0 chr2 220080753 . C . PASS END=220080757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,482:0,39,255:13,0 chr2 220080758 . A . PASS END=220080761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr2 220080762 . G . PASS END=220080762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 220080763 . C . PASS END=220080764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 220080765 . G . PASS END=220080765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 220080766 . C . PASS END=220080770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr2 220080771 . C . PASS END=220080771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 220080772 . C . PASS END=220080774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 220080775 . T . PASS END=220080775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 220080776 . G . PASS END=220080797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,645:0,44,255:19,0 chr2 220080798 . G . PASS END=220080798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220080799 . C . PASS END=220080847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,582:0,45,255:19,0 chr2 220080848 . G . PASS END=220080853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,701:0,60,255:20,0 chr2 220080854 . A . PASS END=220080898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,559:0,45,255:19,0 chr2 220080899 . A . PASS END=220080899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220080900 . A . PASS END=220080902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220081086 . C . PASS END=220081187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:43:0,93,1568:0,93,255:40,0 chr2 220081374 . C . PASS END=220081382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:25:0,75,917:0,75,255:25,0 chr2 220081383 . T . PASS END=220081383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 220081384 . A . PASS END=220081397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,931:0,75,255:26,0 chr2 220081398 . C . PASS END=220081410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1039:0,84,255:29,0 chr2 220081411 . T . PASS END=220081411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:29,0 chr2 220081412 . G . PASS END=220081419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1078:0,90,255:30,0 chr2 220081420 . C . PASS END=220081420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:29,0 chr2 220081421 . A . PASS END=220081433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1081:0,82,255:31,0 chr2 220081434 . C . PASS END=220081434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:30,0 chr2 220081435 . C . PASS END=220081447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:82:32:0,82,1149:0,82,255:32,0 chr2 220081448 . A . PASS END=220081448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1262:0,78,255:29,0 chr2 220081449 . C . PASS END=220081452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 220081453 . C . PASS END=220081453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1177:0,69,255:28,0 chr2 220081454 . A . PASS END=220081471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:33,0 chr2 220081472 . C . PASS END=220081519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:24:0,65,840:0,65,255:26,0 chr2 220081520 . T . PASS END=220081520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,742:0,58,255:24,0 chr2 220081521 . C . PASS END=220081531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,917:0,75,255:25,0 chr2 220081532 . G . PASS END=220081554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:19,0 chr2 220082392 . C . PASS END=220082408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:26,0 chr2 220082409 . C . PASS END=220082414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:26:0,64,917:0,64,255:26,0 chr2 220082415 . C . PASS END=220082415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 220082416 . C . PASS END=220082416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,917:0,64,255:26,0 chr2 220082417 . T . PASS END=220082423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:28,0 chr2 220082424 . G . PASS END=220082424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:27,0 chr2 220082425 . A . PASS END=220082432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1080:0,87,255:32,0 chr2 220082433 . A . PASS END=220082433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:31,0 chr2 220082434 . T . PASS END=220082529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:95:32:0,95,1178:0,95,255:40,0 chr2 220082847 . C . PASS END=220082848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 220082849 . G . PASS END=220082849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 220082850 . C . PASS END=220082858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:16,0 chr2 220082859 . G . PASS END=220082860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 220082861 . C . PASS END=220082869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:19,0 chr2 220082870 . C . PASS END=220082880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,723:0,60,255:24,0 chr2 220082881 . T . PASS END=220082881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,764:0,55,255:23,0 chr2 220082882 . G . PASS END=220082887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,811:0,72,255:24,0 chr2 220082888 . T . PASS END=220082888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:23,0 chr2 220082889 . G . PASS END=220082889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220082890 . T . PASS END=220082890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 220082891 . T . PASS END=220082913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:25:0,64,842:0,64,255:25,0 chr2 220082914 . T . PASS END=220082914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,889:0,45,255:23,0 chr2 220082915 . C . PASS END=220082942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:25:0,69,939:0,75,255:26,0 chr2 220082943 . C . PASS END=220082945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 220082946 . G . PASS END=220082969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,923:0,62,255:25,0 chr2 220082970 . G . PASS END=220082970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 220082971 . A . PASS END=220082972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220082973 . C . PASS END=220082973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 220082974 . C . PASS END=220082976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220082977 . A . PASS END=220082977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,829:0,36,255:21,0 chr2 220082978 . T . PASS END=220082984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 220082985 . T . PASS END=220082985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 220082986 . G . PASS END=220082987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220082988 . C . PASS END=220082988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 220082989 . A . PASS END=220082993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220082994 . C . PASS END=220083042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:19,0 chr2 220083043 . C . PASS END=220083058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,504:0,31,255:13,0 chr2 220083059 . G . PASS END=220083059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr2 220083060 . C . PASS END=220083061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220083062 . C . PASS END=220083065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220083066 . G . PASS END=220083068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220083069 . C . PASS END=220083073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:16:0,39,585:0,48,255:13,0 chr2 220083074 . G . PASS END=220083078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220083079 . T . PASS END=220083115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,388:0,30,255:13,0 chr2 220083116 . G . PASS END=220083116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 220083117 . G . PASS END=220083126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220083127 . C . PASS END=220083128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220083129 . G . PASS END=220083189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,419:0,36,255:13,0 chr2 220083190 . C . LowGQ END=220083190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:11,0 chr2 220083191 . G . PASS END=220083198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,465:0,36,255:12,0 chr2 220083199 . G . PASS END=220083201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220083202 . C . PASS END=220083233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,443:0,36,255:13,0 chr2 220083234 . C . PASS END=220083241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220083242 . G . PASS END=220083243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220083244 . C . PASS END=220083244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220083245 . T . PASS END=220083245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:14,0 chr2 220083246 . G . PASS END=220083278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,521:0,45,255:17,0 chr2 220083279 . C T, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,723,57,723:255,57,0:0,0:1.0418e+02,5.4182e+01,1.6567e-05,4.5000e+02,8.8952e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,10:0,0,12,7 chr2 220083280 . A . PASS END=220083288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,676:0,54,255:18,0 chr2 220083289 . C . PASS END=220083289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 220083290 . G . PASS END=220083296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr2 220083297 . G . PASS END=220083297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:17,0 chr2 220083298 . G . PASS END=220083316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:18,0 chr2 220083317 . A . PASS END=220083333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:18,0 chr2 220083334 . T . PASS END=220083334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 220083335 . C . PASS END=220083361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,543:0,42,255:17,0 chr2 220083362 . C . PASS END=220083362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 220083363 . T . PASS END=220083364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220083365 . C . PASS END=220083373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 220083374 . A . PASS END=220083374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 220083375 . G . PASS END=220083381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 220083382 . C . PASS END=220083383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 220083384 . C . PASS END=220083387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220083388 . G . PASS END=220083388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220083389 . T . PASS END=220083393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 220083394 . A . PASS END=220083395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:11:0,27,405:0,33,255:9,0 chr2 220085169 . C . PASS END=220085174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,140,255:40,0 chr2 220085469 . C . PASS END=220085469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,837:0,33,255:21,0 chr2 220085470 . T . PASS END=220085489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,862:0,61,255:26,0 chr2 220085490 . C . PASS END=220085493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 220085494 . T . PASS END=220085494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,933:0,45,255:24,0 chr2 220085495 . C . PASS END=220085495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220085496 . C . PASS END=220085554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:30:0,81,1135:0,86,255:38,0 chr2 220085555 . C . PASS END=220085555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1404:0,79,255:37,0 chr2 220085556 . C . PASS END=220085565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1343:0,97,255:38,0 chr2 220085566 . A . PASS END=220085566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:35,0 chr2 220085567 . G . PASS END=220085577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:95:37:0,95,1327:0,95,255:36,0 chr2 220085578 . G . PASS END=220085578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:36,0 chr2 220085579 . A . PASS END=220085582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:94:37:0,94,1216:0,94,255:37,0 chr2 220085583 . A . PASS END=220085583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1288:0,72,255:36,0 chr2 220085584 . T . PASS END=220085586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:36,0 chr2 220085587 . G . PASS END=220085587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1255:0,78,255:32,0 chr2 220085588 . A . PASS END=220085594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:84:37:0,84,1260:0,94,255:33,0 chr2 220085595 . C . PASS END=220085595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1296:0,77,255:27,0 chr2 220085596 . C . PASS END=220085601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:84:34:0,84,1260:0,85,255:29,0 chr2 220085602 . A . PASS END=220085611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1008:0,71,255:28,0 chr2 220085612 . G . PASS END=220085612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1071:0,59,255:25,0 chr2 220085613 . A . PASS END=220085614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:27:0,73,1033:0,73,255:26,0 chr2 220085802 . C . PASS END=220085807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:19:0,57,714:0,57,255:19,0 chr2 220085808 . T . PASS END=220085844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:24,0 chr2 220085845 . A G, 122.24 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,8,0:0,17,0:72:160,75,0,969,75,969:255,75,0:0,0:1.2224e+02,7.2243e+01,2.5886e-07,4.5000e+02,1.0701e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,12:0,0,6,19 chr2 220085846 . G . PASS END=220085863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,925:0,75,255:26,0 chr2 220085864 . G . PASS END=220085865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 220085866 . C . PASS END=220085868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220085869 . G . PASS END=220085878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:30,0 chr2 220085879 . C . PASS END=220085879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 220085880 . A . PASS END=220085882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220085883 . G . PASS END=220085883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220085884 . A . PASS END=220085884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220085885 . T . PASS END=220085886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220085887 . G . PASS END=220085887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 220085888 . C . PASS END=220085891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1047:0,81,255:27,0 chr2 220085892 . C . PASS END=220085913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,894:0,64,255:25,0 chr2 220085914 . G . PASS END=220085914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 220085915 . G . PASS END=220085933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,876:0,69,255:23,0 chr2 220085934 . C . PASS END=220085934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:21,0 chr2 220085935 . T . PASS END=220085948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220085949 . T . PASS END=220085951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220085952 . C . PASS END=220085953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220085954 . C . PASS END=220085992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:16:0,40,621:0,40,255:19,0 chr2 220085993 . T . PASS END=220085993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr2 220085994 . C . PASS END=220085998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220085999 . T . PASS END=220086010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:12,0 chr2 220086011 . T . PASS END=220086011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:9,0 chr2 220086012 . G . PASS END=220086024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,404:0,33,255:11,0 chr2 220086772 . C . PASS END=220086773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220086774 . G . PASS END=220086825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1058:0,80,255:32,0 chr2 220086826 . C . PASS END=220086826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 220086827 . A . PASS END=220086835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,83,255:28,0 chr2 220086836 . T . PASS END=220086871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,892:0,69,255:26,0 chr2 220086872 . G . PASS END=220086873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 220086874 . T . PASS END=220086885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:21,0 chr2 220086886 . C . PASS END=220086886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,720:0,19,255:18,0 chr2 220086887 . A . PASS END=220086889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220086994 . C . PASS END=220087000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:11,0 chr2 220087001 . C . PASS END=220087005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220087006 . A . PASS END=220087006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 220087007 . T . PASS END=220087011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 220087012 . C . PASS END=220087050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 220087051 . G . PASS END=220087056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 220087057 . A . PASS END=220087064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:15:8:0,15,225:0,24,255:6,0 chr2 220087065 . C . PASS END=220087076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:9:3:0,9,116:0,9,116:3,0 chr2 220087077 . G . PASS END=220087100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 220087101 . C . PASS END=220087108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 220087109 . C . LowGQ END=220087109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,271:12,0,255:8,0 chr2 220087110 . T . PASS END=220087112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 220087113 . G . PASS END=220087126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 220087127 . C . PASS END=220087127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 220087128 . C . PASS END=220087169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:11,0 chr2 220087170 . G . PASS END=220087172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 220087367 . C . PASS END=220087394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,582:0,45,255:16,0 chr2 220087395 . G . PASS END=220087426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,917:0,62,255:26,0 chr2 220087427 . C . PASS END=220087438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 220087439 . G . PASS END=220087439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220087440 . C . PASS END=220087440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1047:0,49,255:27,0 chr2 220087441 . T . PASS END=220087453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1019:0,87,255:29,0 chr2 220087454 . A . PASS END=220087454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 220087455 . T . PASS END=220087467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:29,0 chr2 220087468 . G . PASS END=220087468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr2 220087469 . C . PASS END=220087474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1102:0,87,255:29,0 chr2 220087475 . G . PASS END=220087534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,886:0,62,255:26,0 chr2 220087535 . A . PASS END=220087545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:24:0,51,765:0,71,255:19,0 chr2 220087546 . G . PASS END=220087546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 220087547 . T . PASS END=220087547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 220087548 . G . PASS END=220087550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 220087551 . A . PASS END=220087551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,798:0,17,255:18,0 chr2 220087552 . A . PASS END=220087552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220087553 . C . PASS END=220087553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:19,0 chr2 220087554 . T . PASS END=220087554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220087555 . C . PASS END=220087569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,673:0,41,255:19,0 chr2 220087570 . C . PASS END=220087570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:18,0 chr2 220087571 . A . PASS END=220087581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr2 220087582 . A . PASS END=220087582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 220087583 . C . PASS END=220087594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,550:0,45,255:15,0 chr2 220087595 . T . PASS END=220087595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,391:0,28,255:14,0 chr2 220087596 . G . PASS END=220087615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,537:0,45,255:15,0 chr2 220088307 . C . PASS END=220088311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1033:0,84,255:30,0 chr2 220088312 . G . PASS END=220088312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 220088313 . A . PASS END=220088325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:30:0,84,1111:0,90,255:31,0 chr2 220088326 . C . PASS END=220088326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1171:0,66,255:30,0 chr2 220088327 . G . PASS END=220088486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:86:32:0,86,1247:0,86,255:40,0 chr2 220088591 . T . PASS END=220088594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,101,1390:0,101,255:35,0 chr2 220088595 . T . PASS END=220088595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1412:0,79,255:33,0 chr2 220088596 . T . PASS END=220088628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,991:0,90,255:33,0 chr2 220088629 . T . PASS END=220088629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1032:0,76,255:29,0 chr2 220088630 . C . PASS END=220088676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1133:0,90,255:35,0 chr2 220088677 . T . PASS END=220088677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1250:0,69,255:32,0 chr2 220088678 . G . PASS END=220088712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:31:0,81,1215:0,93,255:32,0 chr2 220088713 . A . PASS END=220088739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:26,0 chr2 220088740 . A . PASS END=220088740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 220088741 . G . PASS END=220088744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 220088828 . C . PASS END=220088860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,945:0,62,255:26,0 chr2 220088861 . A . PASS END=220088863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 220088864 . G . PASS END=220088865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220088866 . G . PASS END=220088870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220088871 . G . PASS END=220088890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:25,0 chr2 220088891 . A . PASS END=220088891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,914:0,51,255:23,0 chr2 220088892 . C . PASS END=220088940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,893:0,69,255:25,0 chr2 220088941 . A . PASS END=220088941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220088942 . G . PASS END=220088943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220088944 . G . PASS END=220088955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:51:22:0,51,765:0,56,255:19,0 chr2 220088956 . A . PASS END=220088956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:18,0 chr2 220088957 . T . PASS END=220088981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,601:0,41,255:19,0 chr2 220088982 . G . PASS END=220088982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 220088983 . T . PASS END=220088987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 220088988 . A . PASS END=220088988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 220088989 . G . PASS END=220088991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,690:0,54,255:19,0 chr2 220088992 . G . PASS END=220088992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 220088993 . C . PASS END=220088995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 220088996 . T . PASS END=220088996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:17,0 chr2 220088997 . T . PASS END=220089029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,43,255:19,0 chr2 220089030 . T . PASS END=220089032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220089033 . G . PASS END=220089034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 220089035 . C . PASS END=220089055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,429:0,39,255:13,0 chr2 220089056 . A . PASS END=220089061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 220089062 . T . PASS END=220089062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,419:0,25,255:13,0 chr2 220089063 . T . PASS END=220089067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220089068 . T . PASS END=220089068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 220089069 . G . PASS END=220089070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 220089071 . C . PASS END=220089071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 220089072 . G . PASS END=220089076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 220089077 . T . PASS END=220089077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 220089078 . A . PASS END=220089085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:19,0 chr2 220089086 . C . PASS END=220089086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:18,0 chr2 220089087 . C . PASS END=220089104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,690:0,44,255:19,0 chr2 220089105 . G . PASS END=220089105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 220089106 . T . PASS END=220089107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220089108 . C . PASS END=220089117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220089118 . C . PASS END=220089129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,712:0,44,255:19,0 chr2 220089130 . C . PASS END=220089138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:22,0 chr2 220089139 . C . PASS END=220089139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 220089140 . T . PASS END=220089162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,825:0,69,255:24,0 chr2 220089163 . G . PASS END=220089163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:22,0 chr2 220089164 . A . PASS END=220089190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:65:24:0,65,811:0,65,255:26,0 chr2 220089191 . C . PASS END=220089191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 220089192 . A . PASS END=220089194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220089195 . G . PASS END=220089206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1086:0,84,255:29,0 chr2 220089207 . C . PASS END=220089207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 220089208 . G . PASS END=220089216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220089217 . C . PASS END=220089217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:26,0 chr2 220089218 . C . PASS END=220089219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220089220 . C . PASS END=220089288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,870:0,65,255:25,0 chr2 220089289 . G . PASS END=220089290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 220089291 . T . PASS END=220089291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220089292 . C . PASS END=220089299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220089300 . T . PASS END=220089315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1035:0,78,255:26,0 chr2 220089316 . A . PASS END=220089316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 220089317 . G . PASS END=220089384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,845:0,69,255:24,0 chr2 220089385 . G . PASS END=220089385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:20,0 chr2 220089386 . C . PASS END=220089388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 220089389 . G . PASS END=220089392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220089393 . G . PASS END=220089397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 220089398 . A . PASS END=220089399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 220089400 . G . PASS END=220089415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220089416 . G . PASS END=220089416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 220089417 . A . PASS END=220089418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220089419 . T . PASS END=220089419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 220089420 . T . PASS END=220089421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,738:0,63,255:22,0 chr2 220089422 . T . PASS END=220089422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,774:0,50,255:20,0 chr2 220089423 . T . PASS END=220089436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:24,0 chr2 220089437 . A . PASS END=220089437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220089438 . T . PASS END=220089438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 220089439 . G . PASS END=220089439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220089440 . T . PASS END=220089442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:28:0,74,1100:0,74,255:27,0 chr2 220089443 . T . PASS END=220089453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 220089454 . G . PASS END=220089454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:25,0 chr2 220089455 . A . PASS END=220089455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220089456 . G . PASS END=220089465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:30,0 chr2 220089466 . G . PASS END=220089466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1202:0,61,255:30,0 chr2 220089467 . T . PASS END=220089490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1217:0,86,255:34,0 chr2 220089491 . C . PASS END=220089491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 220089492 . G . PASS END=220089492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1286:0,89,255:32,0 chr2 220089493 . T . PASS END=220089493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:71:35:0,71,968:0,71,255:32,0 chr2 220089494 . T . PASS END=220089494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 220089495 . T . PASS END=220089495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1161:0,69,255:31,0 chr2 220089496 . G . PASS END=220089541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:84:34:0,84,1294:0,84,255:39,0 chr2 220089542 . T . PASS END=220089547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:34:0,66,990:0,102,255:26,0 chr2 220089548 . T . PASS END=220089559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:33:0,63,945:0,83,255:23,0 chr2 220089560 . C . PASS END=220089566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:42:34:0,42,630:0,102,255:19,0 chr2 220089567 . G . PASS END=220089568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:30:34:0,30,450:0,102,255:11,0 chr2 220089569 . A . PASS END=220089573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:21:32:0,21,315:0,96,255:8,0 chr2 220089574 . A . PASS END=220089574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:15:32:0,15,225:0,80,255:4,0 chr2 220089575 . G . PASS END=220089576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:9:32:0,9,135:0,96,255:3,0 chr2 220089793 . C . PASS END=220089920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:87:29:0,87,1094:0,87,255:40,0 chr2 220089921 . C . PASS END=220089921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 220089922 . A . PASS END=220089923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 220089924 . T . PASS END=220089934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:29:0,72,1039:0,74,255:26,0 chr2 220090133 . C . PASS END=220090294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:34:0,99,1280:0,102,255:40,0 chr2 220091591 . A . PASS END=220091657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:44:0,120,1800:0,122,255:40,0 chr2 220092492 . T . PASS END=220092535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:54:0,120,1800:0,136,255:40,0 chr2 220092644 . A . PASS END=220092672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 220092673 . A . PASS END=220092673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 220092674 . G . PASS END=220092681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 220092682 . T . PASS END=220092703 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,900:0,72,255:25,0 chr2 220092704 . A . PASS END=220092704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 220092705 . G . PASS END=220092710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,768:0,63,255:21,0 chr2 220092711 . C . PASS END=220092711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 220092712 . T . PASS END=220092712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,723:0,63,255:21,0 chr2 220092713 . C . PASS END=220092724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 220092725 . A . PASS END=220092726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220092727 . T . PASS END=220092744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:42:18:0,42,623:0,43,255:19,0 chr2 220092745 . A . PASS END=220092745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 220092746 . T . PASS END=220092746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 220094980 . A . PASS END=220094997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:24,0 chr2 220094998 . G . PASS END=220094998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 220094999 . C . PASS END=220095009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:26,0 chr2 220095010 . C . PASS END=220095012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 220095013 . G . PASS END=220095013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220095014 . C . PASS END=220095021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220095022 . T . PASS END=220095069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,864:0,61,255:25,0 chr2 220095070 . C . PASS END=220095091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:41:19:0,41,659:0,41,255:19,0 chr2 220095092 . A . PASS END=220095106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:11:0,30,396:0,33,255:11,0 chr2 220095107 . C . PASS END=220095127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:8:0,21,315:0,24,255:9,0 chr2 220096650 . G . PASS END=220096762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:50:0,120,1800:0,134,255:40,0 chr2 220096982 . A . PASS END=220097084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:35:0,99,1296:0,104,255:40,0 chr2 220097212 . G . PASS END=220097395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:81:39:0,81,1215:0,96,255:40,0 chr2 220097396 . C . PASS END=220097405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1070:0,74,255:26,0 chr2 220097801 . G . PASS END=220097913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:98:34:0,98,1256:0,98,255:40,0 chr2 220098008 . A . PASS END=220098130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:32:0,87,1106:0,88,255:38,0 chr2 220098131 . C . PASS END=220098131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1063:0,63,255:28,0 chr2 220098132 . T . PASS END=220098141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1161:0,80,255:30,0 chr2 220098142 . C . PASS END=220098146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,74,255:26,0 chr2 220098147 . C . PASS END=220098147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 220098148 . T . PASS END=220098155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,67,255:21,0 chr2 220098437 . G . PASS END=220098449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,939:0,72,255:25,0 chr2 220098450 . T . PASS END=220098450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:21,0 chr2 220098451 . G . PASS END=220098475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,930:0,62,255:26,0 chr2 220098476 . G . PASS END=220098484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1039:0,84,255:28,0 chr2 220098485 . G . PASS END=220098488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr2 220098489 . C . PASS END=220098489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220098490 . T . PASS END=220098501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:27:0,71,1053:0,71,255:26,0 chr2 220098502 . G . PASS END=220098523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1102:0,84,255:29,0 chr2 220098524 . C . PASS END=220098559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:25:0,65,872:0,65,255:26,0 chr2 220098560 . C . PASS END=220098618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:80:27:0,80,924:0,80,255:33,0 chr2 220098619 . A . PASS END=220098619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1094:0,66,255:28,0 chr2 220098620 . G . PASS END=220098620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:33:0,90,1350:0,99,255:30,0 chr2 220098621 . A . PASS END=220098621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1064:0,79,255:29,0 chr2 220098622 . G . PASS END=220098644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:31,0 chr2 220098645 . T . PASS END=220098646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 220098647 . A . PASS END=220098648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 220098649 . C . PASS END=220098665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,70,255:24,0 chr2 220098855 . A . PASS END=220099010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,0:81:99:42:0,114,1710:0,126,255:40,0 chr2 220099548 . G . PASS END=220099554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:24,0 chr2 220099555 . G . PASS END=220099557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 220099558 . G . PASS END=220099558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 220099559 . G . PASS END=220099559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 220099560 . A . PASS END=220099560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,901:0,64,255:26,0 chr2 220099561 . G . PASS END=220099574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,928:0,81,255:30,0 chr2 220099575 . T . PASS END=220099575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 220099576 . T . PASS END=220099577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:31:0,93,1164:0,93,255:32,0 chr2 220099578 . A . PASS END=220099578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1056:0,79,255:31,0 chr2 220099579 . G . PASS END=220099910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:32:0,84,1149:0,84,255:40,0 chr2 220099911 . T . PASS END=220099911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1300:0,70,255:34,0 chr2 220099912 . T . PASS END=220099912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1357:0,98,255:36,0 chr2 220099913 . C . PASS END=220099914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1297:0,75,255:36,0 chr2 220099915 . G . PASS END=220099935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:33:0,81,1215:0,91,255:35,0 chr2 220099936 . G . PASS END=220099949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1014:0,68,255:26,0 chr2 220099950 . T . PASS END=220099950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220099951 . T . PASS END=220099951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,1000:0,45,255:26,0 chr2 220099952 . A . PASS END=220099958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1019:0,84,255:28,0 chr2 220099959 . T . PASS END=220099962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220099963 . T . PASS END=220099968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220099969 . A . PASS END=220099969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:25,0 chr2 220099970 . G . PASS END=220099970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220099971 . C . PASS END=220099973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 220099974 . C . PASS END=220099978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 220099979 . G . PASS END=220099979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 220099980 . G . PASS END=220099988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1216:0,83,255:31,0 chr2 220099989 . C . PASS END=220099989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:30,0 chr2 220099990 . A . PASS END=220100000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:33:0,82,1149:0,82,255:33,0 chr2 220100001 . T . PASS END=220100001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1157:0,68,255:32,0 chr2 220100002 . G . PASS END=220100009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:33:0,83,1170:0,83,255:33,0 chr2 220100010 . A . PASS END=220100010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1186:0,61,255:32,0 chr2 220100011 . A . PASS END=220100017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:32,0 chr2 220100018 . G . PASS END=220100031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:66:29:0,66,990:0,77,255:26,0 chr2 220100032 . G . PASS END=220100032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,927:0,53,255:23,0 chr2 220100033 . C . PASS END=220100033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:28:0,69,1035:0,84,255:23,0 chr2 220100034 . A . PASS END=220100034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 220100196 . G . PASS END=220100305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,105,1549:0,110,255:40,0 chr2 220100306 . A . PASS END=220100306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1438:0,77,255:36,0 chr2 220100307 . G . PASS END=220100307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,111,1665:0,129,255:37,0 chr2 220100430 . G . PASS END=220100430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 220100431 . T . PASS END=220100442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:30,0 chr2 220100443 . T . PASS END=220100443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:26,0 chr2 220100444 . G . PASS END=220100445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220100446 . C . PASS END=220100447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 220100448 . C . PASS END=220100594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:31:0,80,1161:0,80,255:40,0 chr2 220100595 . A . PASS END=220100597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:32:0,78,1170:0,96,255:26,0 chr2 220100732 . A . PASS END=220100736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,664:0,63,255:21,0 chr2 220100737 . T . PASS END=220100738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:24:21:0,24,654:0,24,255:21,0 chr2 220100739 . T . PASS END=220100769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:23,0 chr2 220100770 . G . PASS END=220100770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 220100771 . G . PASS END=220100772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 220100773 . A . PASS END=220100810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,662:0,41,255:19,0 chr2 220100811 . A . PASS END=220100811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 220100812 . T . PASS END=220100817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,684:0,57,255:19,0 chr2 220101044 . A . PASS END=220101167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:90:36:0,90,1351:0,90,255:40,0 chr2 220101794 . T . PASS END=220101800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,933:0,75,255:26,0 chr2 220101801 . C . PASS END=220102013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:28:0,80,1078:0,80,255:40,0 chr2 220102014 . G . PASS END=220102039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:22:0,60,900:0,66,255:26,0 chr2 220102040 . C . PASS END=220102069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:18:0,45,675:0,47,255:19,0 chr2 220102234 . C . PASS END=220102449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:39:0,90,1337:0,99,255:40,0 chr2 220102548 . C . PASS END=220102679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:42:0,109,1377:0,109,255:40,0 chr2 220102972 . C . PASS END=220103085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,117,1755:0,118,255:40,0 chr2 220103217 . C . PASS END=220103306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:34:0,89,1235:0,89,255:37,0 chr2 220103427 . C . PASS END=220103472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:92:37:0,92,1453:0,92,255:40,0 chr2 220103473 . G . PASS END=220103473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr2 220103474 . G . PASS END=220103501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1147:0,80,255:33,0 chr2 220103814 . C . PASS END=220103932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:89:35:0,89,1271:0,89,255:40,0 chr2 220104133 . C . PASS END=220104173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,1:52:99:47:0,100,1687:0,100,255:40,0 chr2 220104283 . A . PASS END=220104283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 220104284 . T . PASS END=220104360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1210:0,86,255:36,0 chr2 220104361 . T . PASS END=220104361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:32,0 chr2 220104362 . G . PASS END=220104384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:34:0,81,1215:0,102,255:34,0 chr2 220104385 . G . PASS END=220104399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:25:0,72,1080:0,75,255:25,0 chr2 220104400 . T . PASS END=220104400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:44:26:0,44,673:0,44,255:23,0 chr2 220104401 . T . PASS END=220104404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 220104497 . C . PASS END=220104500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,862:0,72,255:24,0 chr2 220104501 . G . PASS END=220104501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:22,0 chr2 220104502 . G . PASS END=220104520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,900:0,61,255:24,0 chr2 220104521 . C . PASS END=220104521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 220104522 . C . PASS END=220104526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220104527 . C . PASS END=220104527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:20,0 chr2 220104528 . A . PASS END=220104545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 220104546 . A . PASS END=220104547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220104548 . G . PASS END=220104555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 220104627 . G . PASS END=220104628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220104629 . C . PASS END=220104630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,714:0,46,255:20,0 chr2 220104631 . T . PASS END=220104631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220104632 . T . PASS END=220104632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220104633 . G . PASS END=220104635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220104636 . T . PASS END=220104646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:20:0,57,855:0,60,255:19,0 chr2 220104647 . C . PASS END=220104648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220104649 . A . PASS END=220104652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,705:0,47,255:20,0 chr2 220104653 . T . PASS END=220104656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220104657 . C . PASS END=220104660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:23:0,48,720:0,69,255:19,0 chr2 220104661 . G . PASS END=220104668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:23:0,66,990:0,69,255:23,0 chr2 220104669 . G . PASS END=220104669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 220104670 . T . PASS END=220104679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:26,0 chr2 220104680 . G . PASS END=220104721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:28:0,84,1063:0,84,255:38,0 chr2 220104722 . A . PASS END=220104722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:37,0 chr2 220104723 . A . PASS END=220104799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:82:33:0,82,1277:0,82,255:40,0 chr2 220104800 . C . PASS END=220104816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:28:0,69,1035:0,84,255:26,0 chr2 220104913 . C . PASS END=220104935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1099:0,80,255:35,0 chr2 220104936 . C . PASS END=220104936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1133:0,72,255:33,0 chr2 220104937 . A . PASS END=220104962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:91:35:0,91,1219:0,91,255:40,0 chr2 220104963 . T . PASS END=220104963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:68:44:0,68,1421:0,68,255:37,0 chr2 220104964 . G . PASS END=220105007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:39:0,100,1326:0,100,255:40,0 chr2 220107236 . C . PASS END=220107296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:36:0,90,1254:0,90,255:40,0 chr2 220107490 . C . PASS END=220107640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:41:0,111,1665:0,116,255:40,0 chr2 220107870 . A . PASS END=220107892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:22:0,65,815:0,65,255:26,0 chr2 220107893 . C . PASS END=220107897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220107898 . G . PASS END=220107900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,962:0,67,255:26,0 chr2 220107901 . T . PASS END=220107905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220107906 . A . PASS END=220107918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,959:0,65,255:26,0 chr2 220107919 . C . PASS END=220107925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 220107926 . C . PASS END=220107931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220107932 . C . PASS END=220107933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220107934 . G . PASS END=220107934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 220107935 . T . PASS END=220107954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:29:0,80,1139:0,80,255:32,0 chr2 220107955 . T . PASS END=220107955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:31,0 chr2 220107956 . G . PASS END=220107959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1051:0,85,255:32,0 chr2 220107960 . G . PASS END=220107960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1188:0,71,255:29,0 chr2 220107961 . A . PASS END=220107962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:30,0 chr2 220107963 . A . PASS END=220107963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1070:0,52,255:26,0 chr2 220107964 . C . PASS END=220107964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1209:0,86,255:28,0 chr2 220107965 . A . PASS END=220107965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1108:0,66,255:27,0 chr2 220107966 . T . PASS END=220107973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 220107974 . C . PASS END=220107978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 220107979 . C . PASS END=220107979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,992:0,57,255:26,0 chr2 220107980 . C . PASS END=220107984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 220107985 . C . PASS END=220107989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220107990 . A . PASS END=220107990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:40:29:0,40,992:0,40,255:25,0 chr2 220107991 . G . PASS END=220107991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220107992 . A . PASS END=220107993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,820:0,64,255:26,0 chr2 220107994 . A . PASS END=220107995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,962:0,81,255:27,0 chr2 220107996 . C . PASS END=220107996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 220107997 . G . PASS END=220107999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 220108000 . C . PASS END=220108012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,64,255:26,0 chr2 220108013 . C . PASS END=220108015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 220108016 . T . PASS END=220108016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,870:0,39,255:19,0 chr2 220108017 . A . PASS END=220108035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,631:0,46,255:17,0 chr2 220108036 . C . PASS END=220108036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 220108224 . C . PASS END=220108224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 220108225 . T . PASS END=220108255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:83:31:0,83,1224:0,83,255:38,0 chr2 220108256 . G . PASS END=220108256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:36,0 chr2 220108257 . C . PASS END=220108295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1313:0,95,255:37,0 chr2 220110722 . A . PASS END=220110725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1048:0,87,255:29,0 chr2 220110726 . G . PASS END=220110726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 220110727 . C . PASS END=220110807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:87:29:0,87,1070:0,87,255:38,0 chr2 220111244 . A . PASS END=220111248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,891:0,75,255:25,0 chr2 220111249 . T . PASS END=220111249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 220111250 . C . PASS END=220111253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,947:0,78,255:26,0 chr2 220111254 . G . PASS END=220111254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 220111255 . A . PASS END=220111259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220111260 . C . PASS END=220111262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220111263 . C . PASS END=220111265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220111266 . G . PASS END=220111268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220111269 . A . PASS END=220111269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1006:0,68,255:26,0 chr2 220111270 . A . PASS END=220111270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,962:0,45,255:26,0 chr2 220111271 . G . PASS END=220111274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220111275 . T . PASS END=220111275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:27,0 chr2 220111276 . C . PASS END=220111278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1041:0,87,255:29,0 chr2 220111279 . C . PASS END=220111279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,976:0,54,255:27,0 chr2 220111280 . T . PASS END=220111285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1062:0,87,255:29,0 chr2 220111286 . G . PASS END=220111286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:27,0 chr2 220111287 . G . PASS END=220111287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 220111288 . A . PASS END=220111291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 220111292 . A . PASS END=220111294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 220111295 . C . PASS END=220111316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 220111317 . T . PASS END=220111317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,917:0,67,255:27,0 chr2 220111318 . C . PASS END=220111318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1062:0,84,255:28,0 chr2 220111319 . T . PASS END=220111319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,793:0,51,255:26,0 chr2 220111320 . C . PASS END=220111321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 220111322 . A . PASS END=220111333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:27:0,74,1078:0,74,255:26,0 chr2 220111334 . T . PASS END=220111349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,926:0,81,255:28,0 chr2 220111350 . G . PASS END=220111354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:71:28:0,71,1016:0,71,255:26,0 chr2 220111355 . T . PASS END=220111355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,958:0,59,255:26,0 chr2 220111356 . T . PASS END=220111364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:29:0,73,1017:0,73,255:26,0 chr2 220111365 . C . PASS END=220111366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 220111367 . T . PASS END=220111369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:28,0 chr2 220111370 . G . PASS END=220111378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:31,0 chr2 220111379 . T . PASS END=220111379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:28,0 chr2 220111380 . G . PASS END=220111598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:31:0,82,1141:0,82,255:40,0 chr2 220111835 . A . PASS END=220111947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:96:35:0,96,1364:0,98,255:40,0 chr2 220111948 . T . PASS END=220111948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:32,0 chr2 220111949 . G . PASS END=220111968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:33:0,90,1319:0,95,255:34,0 chr2 220112137 . A . PASS END=220112175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:40:0,112,1474:0,112,255:40,0 chr2 220112176 . G . PASS END=220112176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,4:50:70:50:0,70,1598:0,70,255:40,0 chr2 220112177 . C . PASS END=220112257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:81:34:0,81,1215:0,86,255:40,0 chr2 220112384 . G . PASS END=220112396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,95,255:34,0 chr2 220112397 . A . PASS END=220112400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:70:36:0,70,1274:0,70,255:34,0 chr2 220112401 . G . PASS END=220112410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1211:0,88,255:36,0 chr2 220112411 . T . PASS END=220112411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1256:0,72,255:35,0 chr2 220112412 . C . PASS END=220112442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:36:0,95,1341:0,95,255:38,0 chr2 220112443 . G . PASS END=220112443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1410:0,79,255:36,0 chr2 220112444 . A . PASS END=220112463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:37:0,84,1313:0,84,255:38,0 chr2 220112464 . G . PASS END=220112464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1335:0,72,255:35,0 chr2 220112465 . C . PASS END=220112479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1288:0,92,255:36,0 chr2 220112915 . T . PASS END=220113036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:30:0,84,1074:0,84,255:40,0 chr2 220113143 . G . PASS END=220113169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:30:0,90,1125:0,90,255:36,0 chr2 220113170 . G . PASS END=220113170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1288:0,69,255:34,0 chr2 220113171 . A . PASS END=220113178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1274:0,91,255:36,0 chr2 220113179 . G . PASS END=220113179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1285:0,75,255:33,0 chr2 220113180 . A . PASS END=220113186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:36:0,99,1485:0,108,255:35,0 chr2 220113187 . T . PASS END=220113187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:33,0 chr2 220113188 . G . PASS END=220113188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 220113189 . G . PASS END=220113189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:64:37:0,64,1302:0,64,255:32,0 chr2 220113190 . A . PASS END=220113197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:35:0,92,1310:0,92,255:33,0 chr2 220113198 . C . PASS END=220113198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:31,0 chr2 220113199 . A . PASS END=220113204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:33,0 chr2 220113205 . C . PASS END=220113207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1225:0,86,255:29,0 chr2 220113208 . A . PASS END=220113219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:31:0,63,945:0,79,255:26,0 chr2 220113220 . T . PASS END=220113230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:44:21:0,44,810:0,44,255:19,0 chr2 220113231 . C . PASS END=220113241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 220113242 . T G, 106.73 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,11,0:0,9,0:57:145,60,0,746,60,746:255,63,0:0,0:1.0673e+02,5.6733e+01,9.3190e-06,4.5000e+02,9.1503e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,11:0,0,8,12 chr2 220113243 . C . PASS END=220113243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220113244 . A . PASS END=220113244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:19,0 chr2 220113245 . G . PASS END=220113279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,604:0,47,255:18,0 chr2 220113280 . G . PASS END=220113281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220115074 . T . PASS END=220115099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 220115100 . C . PASS END=220115104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 220115105 . G . PASS END=220115115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220115116 . C . PASS END=220115125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,942:0,81,255:29,0 chr2 220115126 . T . PASS END=220115126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 220115127 . A . PASS END=220115134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:30,0 chr2 220115135 . T . PASS END=220115135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 220115136 . C . PASS END=220115140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220115141 . G . PASS END=220115141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 220115142 . C . PASS END=220115189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1028:0,82,255:33,0 chr2 220115190 . C . PASS END=220115215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:26:0,67,842:0,67,255:26,0 chr2 220115216 . C . PASS END=220115217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 220115218 . C . PASS END=220115221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220115222 . G . PASS END=220115225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220115226 . A . PASS END=220115228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:26,0 chr2 220115229 . T . PASS END=220115229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220115230 . C . PASS END=220115244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 220115245 . G . PASS END=220115245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220115246 . T . PASS END=220115281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,892:0,72,255:24,0 chr2 220115282 . T . PASS END=220115282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 220115283 . T . PASS END=220115298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 220115299 . G . PASS END=220115299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220115300 . G . PASS END=220115314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,806:0,63,255:21,0 chr2 220115315 . G . PASS END=220115318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,798:0,50,255:19,0 chr2 220115319 . G . PASS END=220115325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 220115326 . C . PASS END=220115330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220115331 . G . PASS END=220115332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 220115333 . A . PASS END=220115333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 220115334 . C . PASS END=220115339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 220115340 . T . PASS END=220115340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 220115341 . G . PASS END=220115388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:24,0 chr2 220115389 . C . PASS END=220115389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 220115390 . A . PASS END=220115390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220115391 . C . PASS END=220115391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 220115392 . A . PASS END=220115393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220115394 . A . LowGQ END=220115394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,4:26:0:26:0,0,585:3,0,255:21,0 chr2 220115395 . C . PASS END=220115445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,870:0,61,255:26,0 chr2 220115446 . G . PASS END=220115449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220115450 . A . PASS END=220115450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220115451 . C . PASS END=220115477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:29:0,81,1215:0,87,255:29,0 chr2 220115478 . A . PASS END=220115479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:33:0,78,1170:0,99,255:26,0 chr2 220115480 . G . PASS END=220115496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1186:0,96,255:33,0 chr2 220115497 . C . PASS END=220115497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr2 220115498 . C . PASS END=220115503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:34:0,86,1233:0,86,255:37,0 chr2 220115504 . T . PASS END=220115504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:35,0 chr2 220115505 . C . PASS END=220115534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:91:36:0,91,1266:0,91,255:40,0 chr2 220115535 . A . PASS END=220115535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1358:0,68,255:39,0 chr2 220115536 . G . PASS END=220116018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:87:36:0,87,1305:0,95,255:40,1 chr2 220116019 . G . PASS END=220116043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:21:0,60,806:0,63,255:26,0 chr2 220116044 . G . PASS END=220116044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:20,0 chr2 220116045 . A . PASS END=220116045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 220116287 . C . PASS END=220116287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 220116288 . A . PASS END=220116301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:23,0 chr2 220116302 . A . PASS END=220116341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:31:0,85,1156:0,85,255:37,0 chr2 220116342 . T . PASS END=220116342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:34,0 chr2 220116343 . G . PASS END=220116435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:30:0,81,1168:0,90,255:40,0 chr2 220116730 . C . PASS END=220116732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,717:0,60,255:21,0 chr2 220116733 . T . PASS END=220116734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 220116735 . A . PASS END=220116735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,784:0,63,255:21,0 chr2 220116736 . C . PASS END=220116739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 220116740 . A . PASS END=220116740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220116741 . G . PASS END=220116741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,699:0,49,255:21,0 chr2 220116742 . G . PASS END=220116766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:22:0,61,832:0,61,255:26,0 chr2 220116767 . G . PASS END=220116779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1088:0,90,255:30,0 chr2 220116780 . C . PASS END=220116783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,994:0,70,255:26,0 chr2 220116784 . C . PASS END=220116786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 220116787 . C . PASS END=220116787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 220116788 . A . PASS END=220116794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1078:0,87,255:29,0 chr2 220116795 . C . PASS END=220116796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220116797 . G . PASS END=220116798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220116799 . A . PASS END=220116799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 220116800 . G . PASS END=220116804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220116805 . T . PASS END=220116857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:21:0,60,900:0,63,255:26,0 chr2 220116858 . T . PASS END=220116858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 220116859 . C . PASS END=220116883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,768:0,63,255:22,0 chr2 220116884 . A . PASS END=220116884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 220116885 . T . PASS END=220116885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220116886 . A . PASS END=220116886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,747:0,52,255:21,0 chr2 220116887 . G . PASS END=220116895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220116896 . G . PASS END=220116899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:22:0,53,814:0,53,255:19,0 chr2 220116900 . G . PASS END=220116906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 220116907 . C . PASS END=220116934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,629:0,41,255:19,0 chr2 220116935 . G . PASS END=220116936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 220116937 . C . PASS END=220116948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,599:0,51,255:17,0 chr2 220116949 . C . PASS END=220116952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220117501 . C . PASS END=220117509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 220117718 . C . PASS END=220117757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,799:0,66,255:23,0 chr2 220117758 . A . PASS END=220117759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220117760 . C . PASS END=220117760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:18,0 chr2 220117761 . C . PASS END=220117768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 220117769 . C . PASS END=220117774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,754:0,63,255:21,0 chr2 220117775 . C . PASS END=220117789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:45:17:0,45,659:0,47,255:17,0 chr2 220118130 . A . PASS END=220118141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:39:0,87,1328:0,87,255:39,0 chr2 220118578 . C . PASS END=220118580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,645:0,43,255:18,0 chr2 220131243 . C . PASS END=220131243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220131244 . A . PASS END=220131244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:21,0 chr2 220131245 . G . PASS END=220131251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,914:0,69,255:24,0 chr2 220131252 . A . PASS END=220131252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:22,0 chr2 220131253 . G . PASS END=220131268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:24:0,72,870:0,72,255:26,0 chr2 220131269 . G . PASS END=220131273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1080:0,84,255:29,0 chr2 220131274 . T . PASS END=220131274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 220131275 . G . PASS END=220131288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,997:0,87,255:29,0 chr2 220134924 . G . PASS END=220135057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1119:0,80,255:40,0 chr2 220135888 . G . PASS END=220135895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 220135896 . G . PASS END=220135905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,950:0,81,255:28,0 chr2 220135906 . C . PASS END=220135906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:26,0 chr2 220135907 . T . PASS END=220135930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1001:0,84,255:33,0 chr2 220135931 . G . PASS END=220135931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1312:0,72,255:35,0 chr2 220135932 . C . PASS END=220135956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:97:35:0,97,1216:0,97,255:38,0 chr2 220135957 . G . PASS END=220135957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1396:0,76,255:36,0 chr2 220135958 . T . PASS END=220136117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:37:0,87,1235:0,87,255:40,0 chr2 220136118 . C . PASS END=220136154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,103,1486:0,103,255:40,0 chr2 220136155 . T C, 195.62 PASS DP=51;MQ=72.38;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,51,0:1.000,0.000:51:0,26,0:0,25,0:150:233,153,0,1919,153,1919:255,153,0:0,0:1.9562e+02,1.4957e+02,0.0000e+00,4.5000e+02,1.8434e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,27,24:0,0,24,27 chr2 220136156 . G . PASS END=220136192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,123,255:40,0 chr2 220136193 . C . PASS END=220136300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:54:0,120,1800:0,137,255:40,0 chr2 220136301 . C . PASS END=220136350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:45:0,108,1668:0,108,255:40,0 chr2 220136351 . G A, 45.76 PASS DP=50;MQ=115.54;MQRankSum=-0.138;ReadPosRankSum=3.558;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:29,21,0:0.420,0.000:50:19,10,0:10,11,0:44:81,0,47,714,976,1690:255,0,255:28,0:4.5760e+01,1.5480e-04,5.0400e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:16,13,11,10:12,17,8,13 chr2 220136352 . G . PASS END=220136370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:46:0,120,1800:0,123,255:40,0 chr2 220136371 . T C, 195.34 PASS DP=50;MQ=113.61;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,50,0:1.000,0.000:50:0,26,0:0,24,0:147:233,150,0,1939,150,1939:255,150,0:0,0:1.9534e+02,1.4749e+02,0.0000e+00,4.5000e+02,1.8226e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,23,27:0,0,25,25 chr2 220136372 . G . PASS END=220136408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:38:0,91,1575:0,91,255:40,0 chr2 220136409 . A . PASS END=220136421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:38:0,82,1396:0,82,255:38,0 chr2 220142658 . A . PASS END=220142658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220144556 . A . PASS END=220144587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1349:0,99,255:35,0 chr2 220144588 . G . PASS END=220144588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 220144589 . C . PASS END=220144618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:30:0,80,1169:0,80,255:33,0 chr2 220144619 . G . PASS END=220144620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 220145300 . G . PASS END=220145409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:96:37:0,96,1260:0,97,255:40,0 chr2 220145411 . T . PASS END=220145411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr2 220146440 . A . PASS END=220146441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:19:0,47,737:0,47,255:20,0 chr2 220146442 . C . PASS END=220146446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,782:0,63,255:21,0 chr2 220146447 . G . PASS END=220146447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:20,0 chr2 220146448 . C . PASS END=220146448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:21,0 chr2 220146449 . G . PASS END=220146469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:26,0 chr2 220146470 . G . PASS END=220146470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 220146471 . C . PASS END=220146471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 220146472 . C . PASS END=220146473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:28,0 chr2 220146474 . G . PASS END=220146474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 220146475 . G . PASS END=220146492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1055:0,84,255:28,0 chr2 220146493 . G . PASS END=220146493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1000:0,57,255:26,0 chr2 220146494 . G . PASS END=220146494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220146659 . A . PASS END=220146659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 220146661 . G . PASS END=220146813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:36:0,99,1485:0,108,255:40,0 chr2 220146814 . T . PASS END=220146814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1357:0,73,255:32,0 chr2 220146815 . C . PASS END=220146827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:37:0,84,1350:0,84,255:35,0 chr2 220147559 . A . PASS END=220147651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:93:38:0,93,1395:0,114,255:40,0 chr2 220147852 . C . PASS END=220147853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 220147855 . A . PASS END=220147855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,7:58:13:58:0,13,1530:0,13,255:40,0 chr2 220147856 . T . PASS END=220147884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:94:57:0,94,1729:0,94,255:40,0 chr2 220147885 . C . PASS END=220147957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:46:0,102,1530:0,138,255:40,0 chr2 220147962 . G . PASS END=220147962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,102,1530:0,129,255:34,0 chr2 220148141 . A . PASS END=220148211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:48:0,117,1755:0,121,255:40,0 chr2 220149353 . G . PASS END=220149357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 220149358 . C . PASS END=220149358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 220149359 . C . PASS END=220149365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,922:0,62,255:26,0 chr2 220149366 . A . PASS END=220149370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 220149371 . G . PASS END=220149371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 220149372 . C . PASS END=220149428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:28:0,80,1049:0,80,255:32,0 chr2 220149429 . G . PASS END=220149429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1147:0,66,255:29,0 chr2 220149430 . G . PASS END=220149435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 220149436 . T . PASS END=220149468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,861:0,62,255:26,0 chr2 220149469 . G . PASS END=220149469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:21,0 chr2 220149470 . G . PASS END=220149476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220149477 . A . PASS END=220149477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:18,0 chr2 220149478 . C . PASS END=220149478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220149479 . C . PASS END=220149480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220149481 . C . PASS END=220149482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220149483 . C . PASS END=220149520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,53,255:19,0 chr2 220149521 . C . PASS END=220149528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220149529 . G . PASS END=220149543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:15,0 chr2 220149544 . G . PASS END=220149544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 220149545 . A . PASS END=220149554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 220149555 . C . PASS END=220149561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220149562 . G . PASS END=220149562 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220149563 . C . PASS END=220149639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,382:0,33,255:13,0 chr2 220149640 . T . PASS END=220149650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 220149651 . A . PASS END=220149651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:14,0 chr2 220149652 . A . PASS END=220149654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 220149655 . A . PASS END=220149655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 220149656 . A . PASS END=220149700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,470:0,42,255:15,0 chr2 220149701 . A . PASS END=220149705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 220149706 . C . PASS END=220149707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220149708 . G . PASS END=220149709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220150709 . A . PASS END=220150712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,961:0,75,255:25,0 chr2 220150713 . G . PASS END=220150714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 220150715 . T . PASS END=220150715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,961:0,42,255:26,0 chr2 220150716 . C . PASS END=220150716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 220150717 . T . PASS END=220150717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 220150718 . G . PASS END=220150719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 220154948 . T . PASS END=220154961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:74:25:0,74,894:0,74,255:29,0 chr2 220154962 . C . PASS END=220154974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:30:0,80,1133:0,80,255:31,0 chr2 220154975 . A . PASS END=220154975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1200:0,69,255:30,0 chr2 220154976 . T . PASS END=220154986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1225:0,86,255:33,0 chr2 220154987 . C . PASS END=220154987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1274:0,69,255:33,0 chr2 220154988 . G . PASS END=220155001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1125:0,80,255:32,0 chr2 220155002 . G . PASS END=220155002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1080:0,79,255:29,0 chr2 220155003 . G . PASS END=220155010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1147:0,80,255:29,0 chr2 220155011 . A . PASS END=220155011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 220155012 . A . PASS END=220155014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220155015 . T . PASS END=220155019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:68:28:0,68,1000:0,68,255:26,0 chr2 220155260 . C . PASS END=220155274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1094:0,87,255:30,0 chr2 220155275 . G . PASS END=220155275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1056:0,54,255:29,0 chr2 220155276 . C . PASS END=220155277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 220155278 . A . PASS END=220155278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:29,0 chr2 220155279 . G . PASS END=220155279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220155280 . G . PASS END=220155281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 220155282 . C . PASS END=220155283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:27,0 chr2 220155284 . C . PASS END=220155287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:30:0,73,1025:0,73,255:26,0 chr2 220155288 . T . PASS END=220155288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1041:0,59,255:25,0 chr2 220155289 . C . PASS END=220155293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220155294 . A . PASS END=220155295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1016:0,81,255:27,0 chr2 220155296 . A . PASS END=220155321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,868:0,61,255:26,0 chr2 220155322 . T . PASS END=220155322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr2 220155323 . C . PASS END=220155333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:25,0 chr2 220155548 . C . PASS END=220155551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220155552 . T . PASS END=220155552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 220155553 . G . PASS END=220155557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220155558 . G . PASS END=220155558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220155559 . C . PASS END=220155579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1049:0,84,255:29,0 chr2 220155580 . A . PASS END=220155612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:22:0,60,900:0,66,255:26,0 chr2 220156192 . C . PASS END=220156223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:29:0,87,1072:0,87,255:36,0 chr2 220156224 . C . PASS END=220156224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:30,0 chr2 220156225 . C . PASS END=220156244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1086:0,87,255:31,0 chr2 220156245 . C . PASS END=220156245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 220159697 . C . PASS END=220159704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 220159705 . G . PASS END=220159729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,349:0,30,255:12,0 chr2 220159730 . G . PASS END=220159740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr2 220159741 . T . PASS END=220159741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,494:0,29,255:14,0 chr2 220159742 . G . PASS END=220159759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr2 220159760 . T . PASS END=220159760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 220159761 . G . PASS END=220159798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:15:0,45,551:0,45,255:19,0 chr2 220159799 . T . PASS END=220159801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 220159802 . T . PASS END=220159856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,44,255:19,0 chr2 220159857 . G . PASS END=220159863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220160948 . C . PASS END=220161067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:30:0,89,1013:0,89,255:40,0 chr2 220161161 . C . PASS END=220161220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1155:0,80,255:37,0 chr2 220161221 . C . PASS END=220161221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1186:0,69,255:30,0 chr2 220161222 . C . PASS END=220161228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:32,0 chr2 220161229 . C . PASS END=220161229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1108:0,63,255:30,0 chr2 220161230 . A . PASS END=220161238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:32:0,83,1156:0,83,255:33,0 chr2 220161471 . A . PASS END=220161544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:34:0,81,1215:0,92,255:39,0 chr2 220161707 . A . PASS END=220161744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr2 220161745 . C . PASS END=220161746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220161747 . C . PASS END=220161766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:24:0,69,1002:0,70,255:26,0 chr2 220161767 . A . PASS END=220161768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,877:0,44,255:22,0 chr2 220161769 . G . PASS END=220161773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 220161774 . T . PASS END=220161774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 220161775 . G . PASS END=220161794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,62,255:23,0 chr2 220161795 . G . PASS END=220161796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:23:0,57,855:0,69,255:19,0 chr2 220161797 . G . PASS END=220161811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:23,0 chr2 220161812 . T . PASS END=220161812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 220161813 . G . PASS END=220161818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 220161819 . G . PASS END=220161819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 220161820 . C . PASS END=220161825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 220161826 . C . PASS END=220161827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220161828 . G . PASS END=220161834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220161835 . A . PASS END=220161854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 220161955 . C . PASS END=220161978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,615:0,51,255:19,0 chr2 220161979 . G . PASS END=220161983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,715:0,63,255:21,0 chr2 220161984 . T . PASS END=220161984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,662:0,46,255:20,0 chr2 220161985 . G . PASS END=220161985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 220161986 . T . PASS END=220162011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:18:0,51,690:0,54,255:19,0 chr2 220162012 . G . PASS END=220162015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220162016 . G . PASS END=220162016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:19,0 chr2 220162017 . G . PASS END=220162019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:23,0 chr2 220162020 . T . PASS END=220162021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 220162022 . C . PASS END=220162049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,823:0,66,255:24,0 chr2 220162050 . C . PASS END=220162050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:23,0 chr2 220162051 . T . PASS END=220162060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,900:0,72,255:24,0 chr2 220162061 . A . PASS END=220162061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 220162062 . A . PASS END=220162062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 220162063 . C . PASS END=220162063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 220162064 . T . PASS END=220162076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,939:0,72,255:25,0 chr2 220162077 . T . PASS END=220162077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 220162078 . G . PASS END=220162087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:23,0 chr2 220162088 . G . PASS END=220162088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 220162089 . A . PASS END=220162090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220162091 . G . PASS END=220162091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 220162092 . G . PASS END=220162097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220162098 . G . PASS END=220162098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 220162099 . T . PASS END=220162102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,808:0,72,255:24,0 chr2 220162103 . C . PASS END=220162103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 220162104 . C . PASS END=220162107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220162108 . T . PASS END=220162108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 220162109 . G . PASS END=220162117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 220162118 . A . PASS END=220162130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:20:0,47,751:0,47,255:19,0 chr2 220162131 . T . PASS END=220162133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220162134 . C . PASS END=220162155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr2 220162607 . C . PASS END=220162638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:13,0 chr2 220162639 . C . PASS END=220162672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:17,0 chr2 220162673 . T . PASS END=220162673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 220162674 . T . PASS END=220162692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 220162693 . G . PASS END=220162693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 220162694 . C . PASS END=220162715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr2 220162716 . G . PASS END=220162717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 220162718 . C . PASS END=220162720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 220162721 . C . PASS END=220162721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:15,0 chr2 220162722 . A . PASS END=220162728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 220162729 . C . PASS END=220162730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr2 220162731 . G . PASS END=220162739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 220162740 . G . PASS END=220162740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 220162741 . C . PASS END=220162745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220162746 . G . PASS END=220162746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 220162747 . C . PASS END=220162749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,566:0,45,255:15,0 chr2 220162750 . C . PASS END=220162752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 220162753 . G . PASS END=220162753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,451:0,6,255:12,0 chr2 220162754 . A . PASS END=220162754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 220162755 . G . PASS END=220162756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:15:0,27,405:0,45,255:9,0 chr2 220162757 . G . PASS END=220162775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,34,255:13,0 chr2 220162776 . G . PASS END=220162789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 220162790 . C . PASS END=220162801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 220162802 . A . PASS END=220162807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220162808 . T . PASS END=220162810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,313:0,30,255:10,0 chr2 220162811 . A . PASS END=220162811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 220162812 . G . PASS END=220162825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220163769 . C . PASS END=220163769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220163770 . T . PASS END=220163770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr2 220163771 . G . PASS END=220163780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1217:0,93,255:32,0 chr2 220163781 . T . PASS END=220163781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 220163782 . G . PASS END=220163801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:32,0 chr2 220163802 . T . PASS END=220163802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 220163803 . G . PASS END=220163833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1123:0,80,255:34,0 chr2 220164027 . C . PASS END=220164106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,2:51:99:43:0,105,1651:0,105,255:40,0 chr2 220164422 . C . PASS END=220164426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 220164427 . G . PASS END=220164427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 220164428 . T . PASS END=220164498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:7:0,21,247:0,21,247:9,0 chr2 220164499 . G . PASS END=220164508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr2 220164707 . T . PASS END=220164720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,590:0,48,255:19,0 chr2 220164721 . G . PASS END=220164726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:20,0 chr2 220164727 . G . PASS END=220164727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,705:0,47,255:20,0 chr2 220164728 . C . PASS END=220164728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 220164729 . C . PASS END=220164729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 220164730 . A . PASS END=220164744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:24,0 chr2 220164745 . T . PASS END=220164745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 220164746 . G . PASS END=220164751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,902:0,72,255:26,0 chr2 220164752 . G . PASS END=220164753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1019:0,84,255:28,0 chr2 220164754 . T . PASS END=220164754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:27,0 chr2 220164755 . G . PASS END=220164803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:28:0,80,979:0,80,255:33,0 chr2 220164804 . T . PASS END=220164804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1087:0,60,255:31,0 chr2 220164805 . C . PASS END=220164835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:30:0,82,1141:0,82,255:32,0 chr2 220164836 . G . PASS END=220164836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:27,0 chr2 220164837 . C . PASS END=220164837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220164838 . A . PASS END=220164838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 220164839 . G . PASS END=220164839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220164840 . C . PASS END=220164840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:26,0 chr2 220164841 . T . PASS END=220164842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220164843 . T . PASS END=220164843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:26,0 chr2 220164844 . G . PASS END=220164844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220164845 . G . PASS END=220164863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,962:0,67,255:26,0 chr2 220164864 . G . PASS END=220164865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220164866 . C . PASS END=220164875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 220164876 . G . PASS END=220164876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,925:0,42,255:23,0 chr2 220164877 . C . PASS END=220164888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,922:0,62,255:24,0 chr2 220164889 . G . PASS END=220164893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,75,255:18,0 chr2 220164894 . T . PASS END=220164898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 220164899 . C . PASS END=220164922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,521:0,45,255:19,0 chr2 220164923 . G . PASS END=220164923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 220164924 . G . PASS END=220164928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:16,0 chr2 220164929 . G . PASS END=220164929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:15,0 chr2 220164930 . T . PASS END=220164930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 220164931 . G . PASS END=220164948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:17,0 chr2 220164949 . T . PASS END=220164949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 220164950 . G . PASS END=220164954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,401:0,42,255:14,0 chr2 220164955 . T . PASS END=220164967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 220164968 . G A, 50.00 PASS DP=13;MQ=250.00;MQRankSum=2.927;ReadPosRankSum=1.545;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,8,0:0.615,0.000:13:0,2,0:5,6,0:40:85,0,38,286,179,465:255,0,155:4,0:5.0000e+01,3.9141e-04,4.0961e+01,2.8617e+02,2.1356e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,5,4,4:5,0,2,6 chr2 220164969 . G . PASS END=220164971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 220164972 . C . PASS END=220164981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 220165665 . T . PASS END=220165699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,113,1800:0,113,255:40,0 chr2 220166310 . C . PASS END=220166328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,532:0,40,255:18,0 chr2 220166329 . C . PASS END=220166342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:24,0 chr2 220166343 . G . PASS END=220166343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 220166344 . C . PASS END=220166351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,840:0,72,255:26,0 chr2 220166352 . T . PASS END=220166352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 220166353 . C . PASS END=220166356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 220166357 . A . PASS END=220166362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:29,0 chr2 220166363 . G . PASS END=220166363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:28,0 chr2 220166364 . A . PASS END=220166370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:30,0 chr2 220166371 . C . PASS END=220166371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:29,0 chr2 220166372 . T . PASS END=220166374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 220166375 . G . PASS END=220166378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1086:0,62,255:29,0 chr2 220166379 . T . PASS END=220166379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220166380 . C . PASS END=220166380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:27,0 chr2 220166381 . A . PASS END=220166381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220166382 . G . PASS END=220166382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr2 220166383 . C . PASS END=220166389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220166390 . A . PASS END=220166390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:27,0 chr2 220166391 . G . PASS END=220166393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 220166394 . C . PASS END=220166399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220166400 . C . PASS END=220166400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1017:0,51,255:26,0 chr2 220166401 . A . PASS END=220166444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:25:0,65,955:0,65,255:26,0 chr2 220166859 . C . PASS END=220166865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 220166866 . C . PASS END=220166866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr2 220166867 . A . PASS END=220166869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,737:0,49,255:22,0 chr2 220166870 . G . PASS END=220166870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220166871 . C . PASS END=220166871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 220166872 . T . PASS END=220166889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,848:0,72,255:25,0 chr2 220166890 . T . PASS END=220166890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 220166891 . C . PASS END=220166897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 220166898 . C . PASS END=220166898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr2 220166899 . C . PASS END=220166899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 220166900 . C . PASS END=220166900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:28:28:0,28,811:0,28,255:26,0 chr2 220166901 . C . PASS END=220166902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 220166903 . A . PASS END=220166903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:28,0 chr2 220166904 . G . PASS END=220166933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 220166934 . C . PASS END=220167004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,62,255:26,0 chr2 220167005 . T . PASS END=220167005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 220167006 . G . PASS END=220167023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 220167024 . C . PASS END=220167030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 220167031 . T . PASS END=220167041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,717:0,63,255:21,0 chr2 220167042 . G . PASS END=220167053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 220167054 . G . PASS END=220167057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 220167058 . T . PASS END=220167058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 220167059 . G . PASS END=220167061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,806:0,63,255:21,0 chr2 220167062 . A . PASS END=220167062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 220167063 . G . PASS END=220167070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 220167071 . T . PASS END=220167093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,47,255:19,0 chr2 220167094 . A . PASS END=220167094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 220167095 . A . PASS END=220167167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,598:0,48,255:17,0 chr2 220167168 . T . PASS END=220167197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,466:0,39,255:13,0 chr2 220167198 . C . PASS END=220167198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 220167199 . A . PASS END=220167203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:11,0 chr2 220167204 . G . PASS END=220167206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:11:0,24,360:0,33,255:8,0 chr2 220167207 . A . PASS END=220167207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr2 220167208 . G . PASS END=220167208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 220167209 . C . PASS END=220167209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 220167210 . C . PASS END=220167210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220167211 . A . PASS END=220167211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:8,0 chr2 220167212 . A . PASS END=220167213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:9,0 chr2 220167298 . C . PASS END=220167306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 220167307 . C . PASS END=220167307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,278:0,10,255:6,0 chr2 220167308 . A . PASS END=220167311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,235:7,0 chr2 220167312 . A . PASS END=220167313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 220167314 . G . PASS END=220167324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,227:0,21,227:7,0 chr2 220167325 . G . PASS END=220167325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 220167326 . G . PASS END=220167329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 220167330 . G . PASS END=220167330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 220167331 . T . PASS END=220167345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 220167346 . A . PASS END=220167346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:6,0 chr2 220167347 . G . PASS END=220167348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 220167349 . G . PASS END=220167355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 220167356 . G . PASS END=220167367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,288:0,24,255:9,0 chr2 220167368 . A . PASS END=220167370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 220167371 . A . PASS END=220167371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 220167372 . G . PASS END=220167391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,329:0,30,255:12,0 chr2 220167392 . G . PASS END=220167392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 220167393 . G . PASS END=220167393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 220167394 . G . PASS END=220167396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 220167397 . C . PASS END=220167403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220167404 . G . PASS END=220167407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220167408 . G . PASS END=220167411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220167412 . A . PASS END=220167412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 220167413 . G . PASS END=220167414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220167415 . G . PASS END=220167416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220167417 . A . PASS END=220167426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:32:16:0,32,495:0,32,255:13,0 chr2 220167427 . G . PASS END=220167427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:12,0 chr2 220167428 . C . PASS END=220167428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220167429 . T . PASS END=220167429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 220167430 . G . PASS END=220167437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 220167438 . C . PASS END=220167445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,423:0,42,255:14,0 chr2 220167446 . T . PASS END=220167446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 220167447 . T . PASS END=220167505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:16,0 chr2 220167506 . T . PASS END=220167506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,498:0,17,255:13,0 chr2 220167507 . C . PASS END=220167511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 220167512 . A . PASS END=220167515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220167516 . G . PASS END=220167516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 220167517 . C . PASS END=220167520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 220167521 . T . PASS END=220167521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr2 220167522 . C . PASS END=220167523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:12,0 chr2 220167524 . C . PASS END=220167524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 220167525 . C . PASS END=220167530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 220167531 . G . PASS END=220167531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 220167532 . A . PASS END=220167534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:12,0 chr2 220167535 . A . PASS END=220167537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 220167538 . T . PASS END=220167538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,311:0,6,255:7,0 chr2 220167539 . C . PASS END=220167553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,319:0,27,255:9,0 chr2 220167554 . C . PASS END=220167554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 220167555 . C . PASS END=220167559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220168457 . C . PASS END=220168460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 220168461 . C . PASS END=220168467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1086:0,87,255:29,0 chr2 220168468 . A . PASS END=220168468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:28,0 chr2 220168469 . C . PASS END=220168469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220168470 . G . PASS END=220168470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220168471 . G . PASS END=220168536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1186:0,83,255:34,0 chr2 220168537 . A . PASS END=220168553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,1035:0,72,255:26,0 chr2 220172166 . C . PASS END=220172166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:24,0 chr2 220172167 . T . PASS END=220172169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,894:0,75,255:25,0 chr2 220172170 . G . PASS END=220172170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:23,0 chr2 220172171 . G . PASS END=220172173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220172174 . A . PASS END=220172174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:24,0 chr2 220172175 . T . PASS END=220172191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:25,0 chr2 220172192 . C . PASS END=220172210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:31,0 chr2 220172211 . C . PASS END=220172211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 220172212 . T . PASS END=220172251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1102:0,87,255:30,0 chr2 220172252 . C . PASS END=220172279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:25:0,61,870:0,61,255:25,0 chr2 220172514 . C . PASS END=220172525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:32,0 chr2 220172526 . C . PASS END=220172526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1246:0,72,255:31,0 chr2 220172527 . T . PASS END=220172564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1241:0,89,255:35,0 chr2 220173656 . C . PASS END=220173656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220173657 . T . PASS END=220173658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,901:0,42,255:25,0 chr2 220173659 . A . PASS END=220173676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:27:0,63,945:0,67,255:26,0 chr2 220173677 . C . PASS END=220173677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,811:0,39,255:20,0 chr2 220173678 . A . PASS END=220173683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:23,0 chr2 220173684 . T . PASS END=220173684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr2 220173685 . G . PASS END=220173699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,821:0,66,255:22,0 chr2 220173799 . C . PASS END=220173799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 220173800 . T . PASS END=220173800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 220173801 . T . PASS END=220173801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 220173802 . C . PASS END=220173802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,502:0,29,255:14,0 chr2 220173803 . C . PASS END=220173803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 220173804 . T . PASS END=220173805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:14,0 chr2 220173806 . A . PASS END=220173806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220173807 . T . PASS END=220173808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,466:0,28,255:11,0 chr2 220173809 . T . PASS END=220173809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 220173810 . C . PASS END=220173811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr2 220173812 . C . PASS END=220173812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 220173813 . A . PASS END=220173814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:11,0 chr2 220173940 . C . PASS END=220173940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,443:0,36,255:12,0 chr2 220173941 . G . PASS END=220173943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,313:0,19,255:11,0 chr2 220173944 . G . PASS END=220173949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:13,0 chr2 220173950 . A . PASS END=220173950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220173951 . A . PASS END=220173952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:11,0 chr2 220173953 . G . PASS END=220173954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 220173955 . C . PASS END=220173955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:11,0 chr2 220173956 . G . PASS END=220173956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 220173957 . C . PASS END=220173957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 220173958 . T . PASS END=220173958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:11,0 chr2 220173959 . G . PASS END=220173959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 220173960 . C . PASS END=220173960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:11,0 chr2 220173961 . A . PASS END=220173961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,421:0,25,255:11,0 chr2 220173962 . G . LowGQ END=220173965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:0:14:0,0,357:0,0,255:12,1 chr2 220173966 . C . PASS END=220173966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 220173967 . C . PASS END=220173967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:11,0 chr2 220173968 . C . PASS END=220173968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 220173969 . G . LowGQ END=220173969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,335:14,0,255:12,0 chr2 220173970 . G . PASS END=220173970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220173971 . G . PASS END=220173972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:13,0 chr2 220173973 . G . PASS END=220173974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220173975 . C . PASS END=220173976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,396:0,22,255:11,0 chr2 220173977 . G . PASS END=220173977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220173978 . C . PASS END=220173978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 220173979 . T . PASS END=220173979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220173980 . C . PASS END=220173984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 220173985 . G . PASS END=220173985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:14,0 chr2 220173986 . C . PASS END=220173996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr2 220173997 . G . PASS END=220173997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,474:0,14,255:13,0 chr2 220173998 . G . PASS END=220173999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220174000 . G . PASS END=220174001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220174002 . A . PASS END=220174002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,397:0,3,255:12,0 chr2 220174003 . G . PASS END=220174003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr2 220174004 . C . PASS END=220174007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 220174008 . A . PASS END=220174008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,388:0,9,255:10,0 chr2 220174009 . G . PASS END=220174016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:11,0 chr2 220174017 . G . PASS END=220174019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:10,0 chr2 220174020 . C . PASS END=220174027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 220174028 . A . LowGQ END=220174028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,310:11,0,255:9,0 chr2 220174029 . C . PASS END=220174033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220174034 . A . PASS END=220174034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,341:0,19,255:10,0 chr2 220174035 . G . PASS END=220174035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220174036 . G . PASS END=220174036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 220174037 . C . PASS END=220174038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,337:0,33,255:11,0 chr2 220174039 . G A, 0.05 DRAGENSnpHardQUAL DP=9;MQ=250.00;MQRankSum=0.747;ReadPosRankSum=0.747;FractionInformativeReads=0.889;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:7,1,0:0.125,0.000:8:3,1,0:4,0,0:20:15,0,47,36,214,249:39,0,225:8,0:4.7239e-02,1.9660e+01,6.9650e+01,5.5420e+01,2.6799e+02,2.7198e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,7,1,0:4,3,1,0 chr2 220174040 . C . PASS END=220174040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,295:0,16,255:10,0 chr2 220174041 . C . PASS END=220174042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,360:0,33,255:11,0 chr2 220174043 . C . LowGQ END=220174043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,316:0,0,255:9,0 chr2 220174044 . G . PASS END=220174046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,380:0,33,255:11,0 chr2 220174047 . C . PASS END=220174047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,317:0,16,255:10,0 chr2 220174048 . G . PASS END=220174048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,358:0,33,255:11,0 chr2 220174049 . C . PASS END=220174049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr2 220174050 . C . PASS END=220174051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr2 220174052 . C . PASS END=220174052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,274:0,16,255:10,0 chr2 220174053 . A . PASS END=220174053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,374:0,33,255:11,0 chr2 220174054 . T . PASS END=220174054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,301:0,16,255:10,0 chr2 220192235 . T . PASS END=220192285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:53:0,120,1800:0,142,255:40,0 chr2 220193646 . G . PASS END=220193730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:92:36:0,92,1308:0,92,255:40,0 chr2 220193885 . C . PASS END=220193974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:33:0,87,1305:0,99,255:40,0 chr2 220194085 . G . PASS END=220194091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:47:0,99,1485:0,125,255:37,0 chr2 220194092 . T . PASS END=220194122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:48:0,81,1215:0,106,255:34,0 chr2 220194123 . C . PASS END=220194126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:63:46:0,63,945:0,138,255:24,0 chr2 220194359 . C . PASS END=220194363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1093:0,80,255:31,0 chr2 220194364 . T . PASS END=220194364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:29,0 chr2 220194365 . G . PASS END=220194470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:33:0,90,1274:0,91,255:40,0 chr2 220194471 . T . PASS END=220194486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:26:0,66,990:0,78,255:26,0 chr2 220195493 . C . PASS END=220195493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:28,0 chr2 220195494 . T . PASS END=220195500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:33,0 chr2 220195501 . A . PASS END=220195501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1140:0,72,255:33,0 chr2 220195502 . T . PASS END=220195649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:34:0,102,1234:0,102,255:40,0 chr2 220197246 . C . PASS END=220197254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,615:0,51,255:18,0 chr2 220197255 . T . PASS END=220197255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 220197256 . A . PASS END=220197256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,653:0,54,255:18,0 chr2 220197257 . G . PASS END=220197257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 220197258 . T . PASS END=220197259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 220197260 . T . PASS END=220197260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 220197261 . C . PASS END=220197272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr2 220197273 . C . PASS END=220197273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220197274 . C . PASS END=220197274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 220197275 . G . PASS END=220197275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220197276 . G . PASS END=220197280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:19,0 chr2 220197281 . C . PASS END=220197283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:23,0 chr2 220197284 . T . PASS END=220197284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 220197285 . T . PASS END=220197285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,892:0,69,255:23,0 chr2 220197286 . C . PASS END=220197286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 220197287 . A . PASS END=220197294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 220197295 . G . PASS END=220197295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 220197296 . A . PASS END=220197296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220197297 . A . PASS END=220197297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 220197298 . G . PASS END=220197305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 220197306 . G . PASS END=220197306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 220197307 . C . PASS END=220197308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220197309 . G . PASS END=220197309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,853:0,41,255:21,0 chr2 220197310 . C . PASS END=220197312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 220197313 . G . PASS END=220197313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:20,0 chr2 220197314 . A . PASS END=220197316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 220197317 . C . PASS END=220197317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 220197318 . C . PASS END=220197320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220197321 . C . PASS END=220197321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 220197322 . G . PASS END=220197332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220197333 . G . PASS END=220197335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 220197336 . A . PASS END=220197339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220197340 . T . PASS END=220197340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:19,0 chr2 220197341 . G . PASS END=220197342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220197343 . G . PASS END=220197349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 220197350 . A . PASS END=220197370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,817:0,66,255:23,0 chr2 220197371 . T . PASS END=220197371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:18,0 chr2 220197372 . C . PASS END=220197372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220197373 . A . PASS END=220197373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220197374 . C . PASS END=220197374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220197375 . T . PASS END=220197375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:19,0 chr2 220197376 . C . PASS END=220197376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220197377 . C . PASS END=220197380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:19,0 chr2 220197381 . G . PASS END=220197384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 220197385 . A . PASS END=220197385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:19,0 chr2 220197386 . G . PASS END=220197386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220197387 . T . PASS END=220197387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:19,0 chr2 220197388 . C . PASS END=220197389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 220197390 . C . PASS END=220197403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:44:20:0,44,720:0,44,255:19,0 chr2 220197404 . G . PASS END=220197404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:4:20:0,4,523:0,4,255:17,0 chr2 220197405 . C . PASS END=220197430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:16:0,42,630:0,48,255:19,0 chr2 220197431 . G . PASS END=220197443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,496:0,39,255:13,0 chr2 220197444 . A . PASS END=220197444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 220197445 . G . PASS END=220197446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220197447 . C . PASS END=220197447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:11,0 chr2 220197448 . C . PASS END=220197458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 220197459 . A . PASS END=220197462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:13:0,26,405:0,26,255:10,0 chr2 220197463 . G . PASS END=220197464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:11,0 chr2 220197465 . T . PASS END=220197466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,464:0,28,255:10,0 chr2 220197467 . A . PASS END=220197470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:14:0,31,476:0,31,255:12,0 chr2 220197883 . T . PASS END=220197899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:130,2:132:99:129:0,120,1800:0,203,255:40,0 chr2 220199251 . T . PASS END=220199257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,3:54:90:52:0,90,1800:0,90,255:40,0 chr2 220239014 . T . PASS END=220239064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:58:0,120,1800:0,149,255:40,0 chr2 220239577 . C . PASS END=220239580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 220239581 . A . PASS END=220239581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr2 220239582 . A . PASS END=220239598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,621:0,48,255:19,0 chr2 220239599 . A . PASS END=220239601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220239602 . A . PASS END=220239612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,737:0,60,255:23,0 chr2 220239613 . G . PASS END=220239613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 220239614 . C . PASS END=220239623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:25,0 chr2 220239624 . C . PASS END=220239716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1050:0,80,255:31,0 chr2 220239717 . A . PASS END=220239717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1056:0,76,255:28,0 chr2 220239718 . G . PASS END=220239718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220239719 . G . PASS END=220239733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:62:25:0,62,930:0,62,255:26,0 chr2 220239734 . A . PASS END=220239734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 220239735 . C . PASS END=220239739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220239740 . A . PASS END=220239744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:18,0 chr2 220246057 . C . PASS END=220246125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,856:0,62,255:26,0 chr2 220246126 . G . PASS END=220246126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 220246127 . C . PASS END=220246135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:22,0 chr2 220246136 . C . PASS END=220246136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:20,0 chr2 220246137 . T . PASS END=220246147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:24,0 chr2 220246148 . A . PASS END=220246148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 220246149 . T . PASS END=220246149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 220246150 . C . PASS END=220246150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:20,0 chr2 220246151 . A . PASS END=220246158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,65,255:23,0 chr2 220246267 . C . PASS END=220246270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220246271 . T . PASS END=220246271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220246272 . G . PASS END=220246280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 220246281 . G . PASS END=220246281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 220246282 . C . PASS END=220246282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 220246283 . C . PASS END=220246283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 220246284 . G . PASS END=220246293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,839:0,66,255:23,0 chr2 220246294 . C . PASS END=220246306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:20:0,48,720:0,60,255:19,0 chr2 220246701 . A . PASS END=220246706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,599:0,51,255:17,0 chr2 220246707 . T . PASS END=220246707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,547:0,21,255:16,0 chr2 220246708 . T . PASS END=220246716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 220246717 . C . PASS END=220246717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:15,0 chr2 220246718 . A . PASS END=220246728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,674:0,44,255:19,0 chr2 220246729 . T . PASS END=220246734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr2 220246735 . C . PASS END=220246735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 220246736 . G . PASS END=220246754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,803:0,66,255:23,0 chr2 220246755 . G . PASS END=220246755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:21,0 chr2 220246756 . G . PASS END=220246761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 220246762 . C . PASS END=220246765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220246766 . C . PASS END=220246770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 220246771 . A . PASS END=220246771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220246772 . G . PASS END=220246789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,782:0,63,255:21,0 chr2 220246790 . C . PASS END=220246821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,582:0,48,255:19,0 chr2 220246822 . T . PASS END=220246822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 220246823 . C . PASS END=220246836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr2 220246837 . C . PASS END=220246853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 220246854 . G . PASS END=220246854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220246855 . A . PASS END=220246857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,450:0,33,255:10,0 chr2 220246858 . C . PASS END=220246861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220247853 . C . PASS END=220247891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:29:0,84,1019:0,87,255:36,0 chr2 220247892 . C . PASS END=220247892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:33,0 chr2 220247893 . T . PASS END=220247932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1186:0,87,255:34,0 chr2 220247933 . A . PASS END=220247933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,948:0,70,255:27,0 chr2 220247934 . G . PASS END=220247934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,961:0,54,255:26,0 chr2 220247935 . G . PASS END=220247936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220249088 . C . PASS END=220249088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220249089 . T . PASS END=220249089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1035:0,54,255:28,0 chr2 220249090 . G . PASS END=220249091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1170:0,93,255:31,0 chr2 220249092 . A . PASS END=220249092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1055:0,41,255:30,0 chr2 220249093 . G . PASS END=220249093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:32,0 chr2 220249094 . G . PASS END=220249165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:93:34:0,93,1264:0,95,255:40,0 chr2 220250146 . C . PASS END=220250146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220250147 . A G, 92.14 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,8,0:0,7,0:42:130,45,0,574,45,574:255,45,0:0,0:9.2143e+01,4.2143e+01,2.6508e-04,4.5000e+02,7.6913e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,7:0,0,11,4 chr2 220250148 . C . PASS END=220250148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220250149 . A . PASS END=220250149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 220250150 . G . PASS END=220250159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 220250160 . C . PASS END=220250184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,701:0,60,255:25,0 chr2 220250185 . T . PASS END=220250201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:67:25:0,67,933:0,67,255:26,0 chr2 220250202 . G . PASS END=220250204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 220250205 . C . PASS END=220250227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 220250228 . A . PASS END=220250228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,823:0,45,255:22,0 chr2 220250229 . T . PASS END=220250253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,945:0,66,255:24,0 chr2 220250353 . C . PASS END=220250359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:19,0 chr2 220250360 . T . PASS END=220250369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:17:0,42,630:0,51,255:16,0 chr2 220250370 . C . PASS END=220250372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr2 220250373 . G . PASS END=220250386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220250387 . T . PASS END=220250387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,437:0,6,255:13,0 chr2 220250388 . T . PASS END=220250425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 220250426 . A . PASS END=220250436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 220250437 . A . PASS END=220250437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:10,0 chr2 220250438 . G . PASS END=220250463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,344:0,33,255:11,0 chr2 220250464 . G . PASS END=220250465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 220250690 . A . PASS END=220250788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:44:0,104,1608:0,104,255:40,0 chr2 220250789 . A . PASS END=220250820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:42:0,105,1575:0,126,255:40,0 chr2 220251008 . C . PASS END=220251015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:28,0 chr2 220251016 . T . PASS END=220251016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:25,0 chr2 220251017 . G . PASS END=220251133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:29:0,81,1215:0,87,255:40,0 chr2 220251387 . C . PASS END=220251401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,892:0,72,255:26,0 chr2 220251402 . G . PASS END=220251417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,984:0,81,255:31,0 chr2 220251418 . A . PASS END=220251418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 220251419 . T . PASS END=220251428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1095:0,90,255:31,0 chr2 220251429 . G . PASS END=220251429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1076:0,77,255:30,0 chr2 220251430 . C . PASS END=220251430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1164:0,93,255:31,0 chr2 220251431 . C . PASS END=220251432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:60:31:0,60,1072:0,60,255:30,0 chr2 220251433 . T . PASS END=220251475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:31:0,87,1305:0,93,255:37,0 chr2 220251476 . T . PASS END=220251477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1216:0,67,255:30,0 chr2 220251478 . G . PASS END=220251500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1205:0,88,255:35,0 chr2 220251614 . C . PASS END=220251618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,599:0,40,255:19,0 chr2 220251619 . T . PASS END=220251619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:13:21:0,13,513:0,13,255:18,0 chr2 220251620 . C . PASS END=220251620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,643:0,30,255:19,0 chr2 220251621 . T . PASS END=220251626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220251627 . T . PASS END=220251627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,693:0,49,255:20,0 chr2 220251628 . T . PASS END=220251628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:10:22:0,10,615:0,10,255:20,0 chr2 220251629 . A . PASS END=220251629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,720:0,33,255:19,0 chr2 220251630 . A . PASS END=220251630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,869:0,69,255:23,0 chr2 220251631 . T . PASS END=220251631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:22:23:0,22,714:0,22,255:21,0 chr2 220251632 . A . PASS END=220251632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr2 220251633 . T . PASS END=220251633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 220251634 . T . PASS END=220251634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220251635 . C . PASS END=220251635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,767:0,39,255:21,0 chr2 220251636 . C . PASS END=220251636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 220251637 . A . PASS END=220251639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220251640 . T . PASS END=220251640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,734:0,55,255:22,0 chr2 220251641 . C . LowGQ END=220251641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,695:8,0,255:20,0 chr2 220251642 . T . PASS END=220251642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220251643 . C . PASS END=220251643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:21,0 chr2 220251644 . A . PASS END=220251644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220251645 . G . PASS END=220251645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,778:0,55,255:21,0 chr2 220251646 . T . PASS END=220251646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220251647 . C . PASS END=220251647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,839:0,36,255:23,0 chr2 220251648 . T . PASS END=220251649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,803:0,42,255:23,0 chr2 220251650 . C . PASS END=220251650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220251651 . T . PASS END=220251651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr2 220251652 . T . PASS END=220251652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220251653 . G . PASS END=220251653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 220251654 . A . PASS END=220251657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,804:0,62,255:25,0 chr2 220251658 . C . PASS END=220251658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,814:0,20,255:23,0 chr2 220251659 . A . PASS END=220251659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:25,0 chr2 220251660 . C . PASS END=220251660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:24,0 chr2 220251661 . T . PASS END=220251661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:25,0 chr2 220251662 . G . PASS END=220251662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 220251663 . A . PASS END=220251664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr2 220251665 . G . PASS END=220251665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,812:0,42,255:23,0 chr2 220251666 . C . PASS END=220251666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr2 220251667 . C . PASS END=220251667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 220251668 . A . PASS END=220251668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 220251669 . G . PASS END=220251669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,831:0,44,255:22,0 chr2 220251670 . C . PASS END=220251672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 220251673 . G . PASS END=220251673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:22,0 chr2 220251674 . G . PASS END=220251675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 220251676 . G . PASS END=220251676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 220251677 . A . PASS END=220251678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:21,0 chr2 220251679 . G . PASS END=220251679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:17:24:0,17,790:0,17,255:21,0 chr2 220251680 . G . PASS END=220251680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 220251681 . C . PASS END=220251681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 220251682 . G . PASS END=220251685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 220251686 . G . PASS END=220251686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 220251687 . C . PASS END=220251687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,812:0,20,255:22,0 chr2 220251688 . G . PASS END=220251698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220251699 . A . PASS END=220251702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,721:0,47,255:19,0 chr2 220251792 . C . PASS END=220251814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,751:0,60,255:25,0 chr2 220251815 . T . PASS END=220251815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 220251816 . T . PASS END=220251821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,917:0,75,255:25,0 chr2 220251822 . A . PASS END=220251822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 220251823 . C . PASS END=220251836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,900:0,72,255:25,0 chr2 220251837 . T . PASS END=220251837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 220251838 . A . PASS END=220251885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,890:0,62,255:26,0 chr2 220252406 . C . PASS END=220252415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 220252416 . G . PASS END=220252446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 220252447 . C . PASS END=220252450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220252451 . A . PASS END=220252468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,759:0,60,255:21,0 chr2 220252469 . G . PASS END=220252469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 220252470 . G . PASS END=220252475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,784:0,63,255:21,0 chr2 220252476 . C . PASS END=220252477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220252478 . T . PASS END=220252478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220252479 . A . PASS END=220252502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,637:0,50,255:18,0 chr2 220252503 . C . PASS END=220252503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:14,0 chr2 220252504 . T . PASS END=220252505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:16,0 chr2 220252506 . T . PASS END=220252506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,551:0,24,255:14,0 chr2 220252507 . G . PASS END=220252510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,720:0,51,255:16,0 chr2 220252511 . G . PASS END=220252511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,559:0,34,255:14,0 chr2 220252512 . C . PASS END=220252516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220264162 . C . PASS END=220264222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:42:0,110,1459:0,110,255:40,0 chr2 220264588 . C . PASS END=220264647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:36:0,88,1350:0,88,255:40,0 chr2 220283111 . C . PASS END=220283111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1140:0,93,255:31,0 chr2 220283131 . C . PASS END=220283131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,102,255:31,0 chr2 220283178 . C . PASS END=220283179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:32,0 chr2 220283185 . A . PASS END=220283221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:90:34:0,90,1349:0,98,255:40,0 chr2 220283222 . C . PASS END=220283258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:40:0,87,1368:0,87,255:40,0 chr2 220283259 . A G, 167.39 PASS DP=40;MQ=248.23;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,40,0:1.000,0.000:40:0,14,0:0,26,0:117:205,120,0,1542,120,1542:255,120,0:0,0:1.6739e+02,1.1739e+02,0.0000e+00,4.5000e+02,1.5216e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,23:0,0,27,13 chr2 220283260 . C . PASS END=220283265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:96:39:0,96,1440:0,117,255:38,0 chr2 220283266 . T . PASS END=220283266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1388:0,79,255:31,0 chr2 220283267 . C . PASS END=220283276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:32:0,80,1147:0,80,255:32,0 chr2 220283277 . T C, 140.30 PASS DP=32;MQ=247.79;FractionInformativeReads=0.969 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,31,0:1.000,0.000:31:0,13,0:0,18,0:90:178,93,0,1186,93,1186:255,96,0:0,0:1.4030e+02,9.0295e+01,0.0000e+00,4.5000e+02,1.2507e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,19:0,0,20,11 chr2 220283278 . T . PASS END=220283292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1164:0,83,255:32,0 chr2 220283293 . C . PASS END=220283293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:30,0 chr2 220283294 . G . PASS END=220283305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:31,0 chr2 220283306 . G . PASS END=220283306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:28,0 chr2 220283307 . C . PASS END=220283313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:33:0,82,1119:0,82,255:30,0 chr2 220283314 . G . PASS END=220283314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1249:0,74,255:28,0 chr2 220283315 . G . PASS END=220283315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 220283316 . C . PASS END=220283316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:28,0 chr2 220283317 . T . PASS END=220283317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1180:0,83,255:28,0 chr2 220283318 . C . PASS END=220283318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:28,0 chr2 220283319 . C . PASS END=220283325 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1064:0,87,255:29,0 chr2 220283326 . T . PASS END=220283355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:63:23:0,63,939:0,64,255:25,0 chr2 220283356 . C . PASS END=220283357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:21,0 chr2 220283358 . C . PASS END=220283359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 220283360 . C . PASS END=220283360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 220283361 . G . PASS END=220283361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220283362 . T . PASS END=220283384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:18:0,42,630:0,50,255:19,0 chr2 220283385 . G . PASS END=220283385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 220283386 . T . PASS END=220283386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 220283387 . C . PASS END=220283390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220283391 . G . PASS END=220283392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220283393 . G . PASS END=220283407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 220283408 . G . PASS END=220283408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:14,0 chr2 220283409 . G . PASS END=220283414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 220283415 . C . PASS END=220283415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 220283416 . C . PASS END=220283418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220283419 . A . PASS END=220283423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220283424 . C . PASS END=220283431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220283432 . A . PASS END=220283443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 220283444 . A . PASS END=220283445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 220283446 . C . PASS END=220283449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr2 220283450 . T . PASS END=220283461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:10:0,24,360:0,30,255:9,0 chr2 220283462 . T . PASS END=220283462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 220283463 . G . PASS END=220283470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 220283471 . C . PASS END=220283480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr2 220283481 . G . LowGQ END=220283481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,365:3,0,255:11,0 chr2 220283482 . G . PASS END=220283502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,382:0,36,255:12,0 chr2 220283503 . A . PASS END=220283503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 220283504 . A . PASS END=220283505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,419:0,36,255:12,0 chr2 220283506 . G . PASS END=220283506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr2 220283507 . A . PASS END=220283511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,449:0,36,255:12,0 chr2 220283512 . G . PASS END=220283512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 220283513 . T . PASS END=220283515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220283516 . A . PASS END=220283534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,413:0,36,255:12,0 chr2 220283535 . C . PASS END=220283553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,512:0,42,255:17,0 chr2 220283554 . G . PASS END=220283554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 220283555 . A . PASS END=220283559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,629:0,51,255:18,0 chr2 220283560 . G . PASS END=220283560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 220283561 . T . PASS END=220283591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,649:0,41,255:18,0 chr2 220283592 . C T, 48.05 PASS DP=18;MQ=250.00;MQRankSum=3.442;ReadPosRankSum=2.536;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:11,7,0:0.389,0.000:18:6,5,0:5,2,0:47:83,0,50,250,393,644:217,0,255:11,0:4.8054e+01,8.9825e-05,5.3000e+01,2.5042e+02,4.2824e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,7,6,1:5,6,4,3 chr2 220283593 . G . PASS END=220283608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:17:0,51,637:0,51,255:19,0 chr2 220283609 . G . PASS END=220283618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220283619 . C . PASS END=220283629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 220283630 . C . PASS END=220283640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 220283641 . G . PASS END=220283661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,745:0,60,255:24,0 chr2 220283662 . C . PASS END=220283662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,845:0,41,255:22,0 chr2 220283663 . G . PASS END=220283688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 220283689 . C . PASS END=220283708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:20:0,47,735:0,47,255:19,0 chr2 220283709 . C . PASS END=220283720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:20,0 chr2 220283721 . G . PASS END=220283754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,629:0,44,255:18,0 chr2 220283755 . A . PASS END=220283758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:17:0,36,540:0,51,255:13,0 chr2 220283759 . C . PASS END=220283762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 220284812 . C . PASS END=220284812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 220284817 . G . PASS END=220284822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 220284823 . G . PASS END=220284837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,818:0,63,255:26,0 chr2 220284838 . G . PASS END=220284853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1001:0,84,255:29,0 chr2 220284854 . A . PASS END=220284854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,946:0,57,255:26,0 chr2 220284855 . A . PASS END=220284856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220284857 . A . PASS END=220284857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:27,0 chr2 220284858 . A . PASS END=220284858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220284859 . T . PASS END=220284859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,917:0,54,255:26,0 chr2 220284860 . T . PASS END=220284860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220284861 . T . PASS END=220284862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,984:0,70,255:26,0 chr2 220284863 . G . PASS END=220284864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220284865 . T . PASS END=220284877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:26:0,75,984:0,78,255:26,0 chr2 220284879 . T . PASS END=220284879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 220284973 . G . PASS END=220285069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:44:0,108,1598:0,116,255:40,0 chr2 220285071 . A . PASS END=220285071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:99:47:0,108,1620:0,125,255:35,0 chr2 220285074 . C . PASS END=220285074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,111,1665:0,141,255:37,0 chr2 220285079 . G . PASS END=220285079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:39:0,101,1418:0,101,255:34,0 chr2 220285209 . C . PASS END=220285209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:32,0 chr2 220285217 . G . PASS END=220285378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:30:0,83,1202:0,83,255:40,0 chr2 220285382 . G . PASS END=220285382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 220285384 . T . PASS END=220285384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:69:29:0,69,1035:0,71,255:22,0 chr2 220285550 . G . PASS END=220285675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:38:0,99,1530:0,99,255:40,0 chr2 220286055 . C . PASS END=220286055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 220286059 . C . PASS END=220286059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220286062 . A . PASS END=220286071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,715:0,60,255:22,0 chr2 220286072 . T . PASS END=220286072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,746:0,52,255:21,0 chr2 220286073 . G . PASS END=220286077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220286078 . G . PASS END=220286078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,723:0,39,255:21,0 chr2 220286079 . G . PASS END=220286110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,876:0,69,255:26,0 chr2 220286111 . G . PASS END=220286163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:80:27:0,80,987:0,80,255:30,0 chr2 220286164 . C . PASS END=220286165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220286166 . C . PASS END=220286169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220286170 . A . PASS END=220286171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220286172 . G . PASS END=220286177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 220286178 . G . PASS END=220286183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:73:28:0,73,979:0,73,255:26,0 chr2 220286184 . C . PASS END=220286186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220286187 . C . PASS END=220286188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 220286189 . A . PASS END=220286190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 220286191 . C . PASS END=220286247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,746:0,60,255:24,0 chr2 220286248 . A . PASS END=220286269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,47,255:20,0 chr2 220286270 . G . PASS END=220286275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 220286276 . A . PASS END=220286282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr2 220288496 . T . PASS END=220288496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220288499 . G . PASS END=220288504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 220288505 . T . PASS END=220288505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,946:0,67,255:26,0 chr2 220288506 . C . PASS END=220288507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220288508 . C . PASS END=220288540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:23:0,62,914:0,62,255:26,0 chr2 220288541 . A . PASS END=220288541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 220288542 . G . PASS END=220288543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 220290383 . A . PASS END=220290383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,114,1710:0,120,255:38,0 chr2 220290385 . A . PASS END=220290468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,99,1405:0,99,255:40,0 chr2 220290663 . C . PASS END=220290664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:49:0,120,1800:0,147,255:40,0 chr2 220290671 . G . PASS END=220290712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,140,255:40,0 chr2 220290763 . C . PASS END=220290763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 220290824 . C . PASS END=220290824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:37:0,80,1319:0,80,255:29,0 chr2 220290826 . G . PASS END=220290826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:35:0,90,1350:0,105,255:30,0 chr2 220290910 . G . PASS END=220290910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,111,1665:0,126,255:37,0 chr2 220290992 . G . PASS END=220290992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 220291007 . G . PASS END=220291007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 220291020 . C . PASS END=220291020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 220291140 . G . PASS END=220291140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 220291201 . G . PASS END=220291201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,969:0,50,255:25,0 chr2 220291271 . G . PASS END=220291271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,119,1703:0,119,255:40,0 chr2 220291275 . G . PASS END=220291301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:94:51:0,94,1717:0,94,255:40,0 chr2 220291407 . C . PASS END=220291407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:26:0,54,810:0,78,255:18,0 chr2 220298952 . A . PASS END=220299052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:91:36:0,91,1321:0,91,255:40,0 chr2 220299700 . A . PASS END=220299713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:15:5:0,15,172:0,15,172:5,0 chr2 220299714 . G . PASS END=220299720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:8,0 chr2 220299721 . C . LowGQ END=220299721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:15,0,247:7,0 chr2 220299722 . G . PASS END=220299725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,302:0,24,255:8,0 chr2 220299726 . C . PASS END=220299746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 220299747 . A . PASS END=220299749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 220299750 . C . PASS END=220299764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 220299765 . G . PASS END=220299765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 220299766 . C . PASS END=220299770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 220299771 . G . PASS END=220299771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 220299772 . A . PASS END=220299778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220299779 . C . PASS END=220299779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 220299780 . C . PASS END=220299780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 220299781 . A . LowGQ END=220299788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:11:0,0,288:0,0,255:11,0 chr2 220299789 . G . PASS END=220299792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,443:0,36,255:12,0 chr2 220299793 . G . LowGQ END=220299793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:11,0 chr2 220299794 . G . PASS END=220299794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:11,0 chr2 220299795 . C . LowGQ END=220299797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,357:3,0,255:11,0 chr2 220299798 . C . PASS END=220299855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 220299856 . G . PASS END=220299856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220299857 . C . PASS END=220299881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:13,0 chr2 220299882 . G . PASS END=220299889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220299890 . T . PASS END=220299894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220299895 . G . PASS END=220299902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 220299903 . G . PASS END=220299910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 220299911 . A . PASS END=220299914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220299915 . C . PASS END=220299916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220299917 . G . PASS END=220299921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220299922 . C . PASS END=220299922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220299923 . G . PASS END=220299924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220299925 . T . PASS END=220299928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220299929 . T . PASS END=220299929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr2 220299930 . C . PASS END=220299934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 220299935 . A . PASS END=220299935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:10,0 chr2 220299936 . T . PASS END=220299938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 220299939 . G . PASS END=220299941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:12:0,27,405:0,36,255:9,0 chr2 220299942 . G . PASS END=220299954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:10,0 chr2 220299955 . C . PASS END=220299962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr2 220299963 . C . LowGQ END=220299963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:8,0 chr2 220299964 . G . PASS END=220299966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220299967 . C . PASS END=220300007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:12,0 chr2 220300008 . C . LowGQ END=220300008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr2 220300009 . G . PASS END=220300010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220300011 . C . PASS END=220300033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:9:0,21,315:0,27,255:9,0 chr2 220300034 . A . PASS END=220300034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 220300035 . C . PASS END=220300052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,315:0,24,255:9,0 chr2 220300053 . C . PASS END=220300057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 220300058 . A . PASS END=220300087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,263:0,21,255:8,0 chr2 220306280 . A . PASS END=220306290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,615:0,51,255:17,0 chr2 220306291 . C . PASS END=220306291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:15,0 chr2 220306292 . T . PASS END=220306302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,537:0,48,255:16,0 chr2 220306303 . C . PASS END=220306303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 220306304 . C . PASS END=220306314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr2 220306315 . A . PASS END=220306315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:14,0 chr2 220306316 . G . PASS END=220306316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 220306773 . A . LowGQ END=220306774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:0:7:0,0,194:0,0,194:6,0 chr2 220306775 . G . PASS END=220306775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,271:0,21,255:7,0 chr2 220306776 . A . LowGQ END=220306777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:0,0,247:7,0 chr2 220306778 . G . PASS END=220306779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 220306780 . A . PASS END=220306780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,239:0,7,239:7,0 chr2 220306781 . G . PASS END=220306781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,241:0,10,241:8,0 chr2 220306782 . C . LowGQ END=220306782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr2 220306783 . T . PASS END=220306783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,227:0,10,227:8,0 chr2 220306784 . G . PASS END=220306784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 220306785 . T . PASS END=220306785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,294:0,13,255:9,0 chr2 220306786 . G . PASS END=220306792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 220306793 . G . PASS END=220306793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,316:0,14,255:9,0 chr2 220306794 . A . PASS END=220306805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,333:0,30,255:10,0 chr2 220307830 . A . PASS END=220307860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:19:0,44,654:0,44,255:19,0 chr2 220307861 . G . PASS END=220307862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220307863 . C . PASS END=220307879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:45:20:0,45,675:0,56,255:18,0 chr2 220307880 . G . PASS END=220307924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:21:0,63,762:0,63,255:26,0 chr2 220307925 . G . PASS END=220307956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1008:0,81,255:29,0 chr2 220307957 . G . PASS END=220307958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220308747 . C . PASS END=220308781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:44:0,120,1800:0,132,255:40,0 chr2 220309375 . A . PASS END=220309392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:23,0 chr2 220309393 . A . PASS END=220309393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 220309394 . T . PASS END=220309401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,884:0,69,255:26,0 chr2 220309402 . G . PASS END=220309402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 220309403 . C . PASS END=220309404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220309405 . A . PASS END=220309420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1133:0,84,255:30,0 chr2 220309421 . G . PASS END=220309421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 220309422 . C . PASS END=220309425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1117:0,90,255:30,0 chr2 220309426 . T . PASS END=220309426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 220309427 . G . PASS END=220309434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1117:0,90,255:30,0 chr2 220309435 . G . PASS END=220309435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 220309436 . G . PASS END=220309456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 220309457 . C . PASS END=220309464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:26,0 chr2 220309547 . G . PASS END=220309556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:20:0,51,765:0,60,255:19,0 chr2 220309557 . C . PASS END=220309572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,892:0,66,255:23,0 chr2 220309573 . T . PASS END=220309573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 220309574 . C . PASS END=220309574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220309575 . C . PASS END=220309576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 220309577 . T . PASS END=220309591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,953:0,62,255:26,0 chr2 220309592 . C . PASS END=220309604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:30,0 chr2 220309605 . C . PASS END=220309637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,947:0,75,255:26,0 chr2 220309638 . C . PASS END=220309638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,892:0,36,255:24,0 chr2 220309639 . G . PASS END=220309658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,947:0,62,255:26,0 chr2 220309659 . G . PASS END=220309660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 220309661 . A . PASS END=220309663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 220309664 . C . PASS END=220309694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1141:0,87,255:31,0 chr2 220309695 . G . PASS END=220309752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:25:0,62,937:0,62,255:26,0 chr2 220309753 . C . PASS END=220309753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220309754 . C . PASS END=220309754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 220309755 . G . PASS END=220309756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 220309757 . T . PASS END=220309762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,961:0,65,255:26,0 chr2 220309763 . G . PASS END=220309771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,972:0,84,255:28,0 chr2 220309772 . G . PASS END=220309772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 220309773 . A . PASS END=220309776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220309777 . A . PASS END=220309777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 220309778 . A . PASS END=220309779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220309780 . C . PASS END=220309780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 220309781 . T . PASS END=220309784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 220309785 . G . PASS END=220309791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 220309792 . A . PASS END=220309794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220309795 . T . PASS END=220309795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220309796 . G . PASS END=220309800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 220309801 . T . PASS END=220309829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:26,0 chr2 220309830 . C . PASS END=220309838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 220309839 . C . PASS END=220309840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 220309841 . G . PASS END=220309841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220309842 . C . PASS END=220309846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220309847 . T . PASS END=220309862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,712:0,44,255:19,0 chr2 220309863 . A . PASS END=220309863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 220309864 . C . PASS END=220309869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 220309870 . C . PASS END=220309870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,545:0,37,255:14,0 chr2 220309871 . T . PASS END=220309873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 220309874 . C . PASS END=220309883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:13,0 chr2 220312696 . C . PASS END=220312698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr2 220312699 . C . PASS END=220312699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 220312700 . G . PASS END=220312711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,698:0,51,255:19,0 chr2 220312712 . G . PASS END=220312747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,735:0,60,255:26,0 chr2 220312748 . C . PASS END=220312757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1033:0,84,255:29,0 chr2 220312758 . A . PASS END=220312758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 220312759 . A . PASS END=220312761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220312762 . C . PASS END=220312762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220312763 . C . PASS END=220312766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220312767 . G . PASS END=220312783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:27:0,68,1006:0,68,255:26,0 chr2 220312784 . C . PASS END=220312784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,870:0,50,255:23,0 chr2 220312785 . C . PASS END=220312814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:26:0,60,900:0,62,255:25,0 chr2 220312815 . C . PASS END=220312815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:20,0 chr2 220312816 . G . PASS END=220312826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 220312827 . T . PASS END=220312827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 220312828 . C . PASS END=220312831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,878:0,72,255:24,0 chr2 220312832 . A . PASS END=220312832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 220312833 . A . PASS END=220312871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,878:0,62,255:26,0 chr2 220312872 . C . PASS END=220312881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1319:0,96,255:35,0 chr2 220312882 . G . PASS END=220312882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1079:0,72,255:33,0 chr2 220312883 . C . PASS END=220312900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:80:35:0,80,1268:0,80,255:36,0 chr2 220312901 . G . PASS END=220312901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:36,0 chr2 220312902 . A . PASS END=220312902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:35,0 chr2 220312903 . G . PASS END=220312905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:95:37:0,95,1319:0,95,255:36,0 chr2 220312906 . T . PASS END=220312906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1263:0,56,255:35,0 chr2 220312907 . G . PASS END=220312907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:97:38:0,97,1313:0,97,255:37,0 chr2 220312908 . T . PASS END=220312908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:37,0 chr2 220312909 . G . PASS END=220312962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:86:33:0,86,1225:0,86,255:37,0 chr2 220312963 . C . PASS END=220312963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:29,0 chr2 220312964 . G . PASS END=220312973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:29,0 chr2 220312974 . T . PASS END=220312974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220312975 . G . PASS END=220312975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:26,0 chr2 220312976 . G . PASS END=220312978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220312979 . G . PASS END=220312979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 220312980 . G . PASS END=220312981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220312982 . A . PASS END=220312982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,968:0,68,255:26,0 chr2 220312983 . C . PASS END=220312989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1072:0,84,255:29,0 chr2 220312990 . A . PASS END=220312990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:28,0 chr2 220312991 . T . PASS END=220312995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220312996 . A . PASS END=220312996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1047:0,57,255:27,0 chr2 220312997 . C . PASS END=220313002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220313003 . A . PASS END=220313004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1023:0,71,255:24,0 chr2 220313005 . G . PASS END=220313005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,919:0,56,255:23,0 chr2 220313006 . C . PASS END=220313014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:28:0,66,990:0,71,255:25,0 chr2 220313015 . G . PASS END=220313048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,706:0,44,255:19,0 chr2 220313049 . C . PASS END=220313049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:16,0 chr2 220313050 . G . PASS END=220313089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr2 220313090 . C . PASS END=220313090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr2 220313091 . T . PASS END=220313092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220313093 . C . PASS END=220313109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:12:0,30,450:0,36,255:13,0 chr2 220313110 . A . PASS END=220313117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220313118 . G . PASS END=220313152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:11,0 chr2 220313153 . C . PASS END=220313160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220313161 . G . PASS END=220313199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,421:0,33,255:13,0 chr2 220313200 . G . PASS END=220313208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220313209 . C . PASS END=220313210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220313211 . G . PASS END=220313211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220313212 . C . PASS END=220313220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 220313221 . G . PASS END=220313226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 220313227 . C . PASS END=220313272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,435:0,36,255:13,0 chr2 220313273 . G . PASS END=220313308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:16,0 chr2 220313309 . C . PASS END=220313323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:14:0,36,540:0,42,255:13,0 chr2 220313324 . C . PASS END=220313331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 220313332 . C . PASS END=220313373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr2 220313374 . G . PASS END=220313374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 220313375 . G . PASS END=220313400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:12:0,36,435:0,36,255:13,0 chr2 220313401 . G . PASS END=220313402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 220313403 . A . PASS END=220313404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220313405 . G . PASS END=220313415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:15,0 chr2 220313416 . C . PASS END=220313416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 220313417 . T . PASS END=220313420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220313421 . A . PASS END=220313421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 220313422 . C . PASS END=220313429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr2 220313430 . T . PASS END=220313440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220313441 . C . PASS END=220313446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220313447 . C . PASS END=220313447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 220313448 . G . PASS END=220313511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,505:0,42,255:17,0 chr2 220313512 . A . PASS END=220313512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 220313513 . T . PASS END=220313526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,612:0,48,255:16,0 chr2 220313527 . C . PASS END=220313527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:15,0 chr2 220313528 . C . PASS END=220313544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,612:0,45,255:16,0 chr2 220313545 . G . PASS END=220313548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:15:0,32,557:0,32,255:14,0 chr2 220313549 . T . PASS END=220313577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:44:17:0,44,629:0,44,255:17,0 chr2 220313578 . C . PASS END=220313642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,34,255:13,0 chr2 220313643 . A . PASS END=220313643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220313644 . G . PASS END=220313644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220313645 . G . PASS END=220313669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 220313670 . C . PASS END=220313670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 220313671 . G . PASS END=220313679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 220313680 . G C, 50.00 PASS DP=13;MQ=250.00;MQRankSum=3.016;ReadPosRankSum=1.954;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:6,7,0:0.538,0.000:13:3,4,0:3,3,0:48:85,0,50,250,215,465:232,0,193:5,0:5.0000e+01,6.6010e-05,5.2831e+01,2.5032e+02,2.4940e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,4,4,3:5,1,5,2 chr2 220313681 . A . PASS END=220313708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:12:0,30,450:0,36,255:13,0 chr2 220313709 . C . PASS END=220313713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 220313714 . C . PASS END=220313714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 220313715 . C . PASS END=220313717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 220313718 . C . PASS END=220313719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 220313720 . C . PASS END=220313720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 220313721 . C . PASS END=220313730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,537:0,45,255:15,0 chr2 220313731 . T . PASS END=220313745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,540:0,39,255:13,0 chr2 220313746 . G . PASS END=220313748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220313749 . G . PASS END=220313761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,451:0,39,255:13,0 chr2 220313762 . G . LowGQ END=220313762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:12,0 chr2 220313763 . G . PASS END=220313767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 220313768 . A . PASS END=220313768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 220313769 . A . PASS END=220313782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 220313783 . G . PASS END=220313798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,529:0,45,255:19,0 chr2 220313799 . T . PASS END=220313799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220313800 . C . PASS END=220313800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220313801 . C . PASS END=220313804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220313805 . C . PASS END=220313807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220313808 . G . PASS END=220313816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220313817 . C . PASS END=220313818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220313819 . G . PASS END=220313840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 220313841 . C . PASS END=220313841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 220313842 . C . PASS END=220313849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 220313850 . T . PASS END=220313850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 220313851 . G . PASS END=220313912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,823:0,62,255:26,0 chr2 220313913 . G . PASS END=220313925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,704:0,44,255:19,0 chr2 220313926 . C . PASS END=220313926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,585:0,29,255:18,0 chr2 220313927 . T . PASS END=220313945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,644:0,43,255:19,0 chr2 220313946 . G . PASS END=220313946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 220313947 . C . PASS END=220313955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:18,0 chr2 220313956 . C . PASS END=220313956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 220313957 . A . PASS END=220313957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 220313958 . A . PASS END=220313959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:14,0 chr2 220313960 . G . PASS END=220313962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:14,0 chr2 220313963 . C . PASS END=220313963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 220313964 . G . PASS END=220313971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 220313972 . C . PASS END=220313972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 220313973 . G . PASS END=220313977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr2 220313978 . A . PASS END=220313981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:22:12:0,22,405:0,22,255:10,0 chr2 220313982 . C . PASS END=220313993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:10,0 chr2 220315858 . A . PASS END=220315887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,426:0,33,255:13,0 chr2 220315888 . G . PASS END=220315888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 220315889 . A . PASS END=220315889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 220315890 . G . PASS END=220315890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 220315891 . A . PASS END=220315893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220315894 . A . PASS END=220315905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,574:0,45,255:15,0 chr2 220315906 . C . PASS END=220315906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 220315907 . C . PASS END=220315924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:16:0,40,590:0,40,255:19,0 chr2 220315925 . C . PASS END=220315925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 220315926 . C . PASS END=220315930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 220315931 . G . PASS END=220315932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220315933 . A . PASS END=220315934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220315935 . G . PASS END=220315947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,815:0,66,255:22,0 chr2 220315948 . C . PASS END=220315948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 220315949 . A . PASS END=220315961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220315962 . C . PASS END=220315985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:44:17:0,44,651:0,44,255:17,0 chr2 220315986 . A . PASS END=220316001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:34:13:0,34,415:0,34,255:13,0 chr2 220316347 . T . PASS END=220316357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 220316358 . A . PASS END=220316358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 220316359 . A . PASS END=220316370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 220316371 . C . PASS END=220316413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,512:0,42,255:16,0 chr2 220316414 . G . PASS END=220316462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,429:0,39,255:13,0 chr2 220316463 . T . PASS END=220316463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:8:13:0,8,426:0,8,255:12,0 chr2 220316464 . A . PASS END=220316486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,459:0,39,255:13,0 chr2 220316487 . C . PASS END=220316490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,446:0,42,255:14,0 chr2 220316491 . G . PASS END=220316491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,457:0,3,255:13,0 chr2 220316492 . C . PASS END=220316498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220316499 . A . PASS END=220316509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220316510 . C . PASS END=220316511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220316512 . C . PASS END=220316514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220316515 . T . PASS END=220316515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:12,0 chr2 220316516 . G . PASS END=220316529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 220326173 . A . PASS END=220326251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:47:0,120,1800:0,125,255:40,0 chr2 220326596 . C . PASS END=220326596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,327:0,27,255:9,0 chr2 220326604 . G . PASS END=220326607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:11,0 chr2 220326608 . G . PASS END=220326608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220326609 . T . PASS END=220326646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr2 220326647 . G . PASS END=220326647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 220326648 . G . PASS END=220326650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 220326651 . T . PASS END=220326651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 220326652 . A . PASS END=220326658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,468:0,42,255:14,0 chr2 220326659 . C . PASS END=220326660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220326661 . C . PASS END=220326666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:17,0 chr2 220326667 . A . PASS END=220326667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 220326668 . G . PASS END=220326700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:18,0 chr2 220326701 . A . PASS END=220326701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:14,0 chr2 220326702 . A . PASS END=220326702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,435:0,15,255:13,0 chr2 220326703 . C . PASS END=220326707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,582:0,45,255:15,0 chr2 220326708 . A . PASS END=220326708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,362:0,28,255:12,0 chr2 220326709 . C . PASS END=220326711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220326712 . T . PASS END=220326712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr2 220326713 . G . PASS END=220326725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,521:0,45,255:15,0 chr2 220326726 . A . PASS END=220326727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 220326728 . C . PASS END=220326730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220326731 . G . PASS END=220326731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr2 220326732 . A . PASS END=220326735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 220326736 . G . PASS END=220326736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 220326737 . C . PASS END=220326737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 220326738 . C . PASS END=220326738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220326739 . G . PASS END=220326741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr2 220326742 . C . PASS END=220326743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 220326744 . T . PASS END=220326744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,433:0,25,255:11,0 chr2 220326745 . C . PASS END=220326745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 220326746 . T . PASS END=220326746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:11,0 chr2 220326747 . G . PASS END=220326747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 220326748 . A . PASS END=220326748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 220326749 . C . PASS END=220326751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 220326752 . T . PASS END=220326752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,404:0,22,255:9,0 chr2 220326753 . G . PASS END=220326755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220326756 . T . PASS END=220326756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 220326757 . C . PASS END=220326763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,421:0,36,255:12,0 chr2 220326764 . A . PASS END=220326764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:11,0 chr2 220326765 . C . PASS END=220326779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,391:0,36,255:13,0 chr2 220327020 . G . PASS END=220327020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,807:0,66,255:22,0 chr2 220327021 . T . PASS END=220327021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:19:22:0,19,698:0,19,255:20,0 chr2 220327022 . C . PASS END=220327025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,778:0,66,255:24,0 chr2 220327026 . C . PASS END=220327026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:24,0 chr2 220327027 . T . PASS END=220327036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,850:0,61,255:26,0 chr2 220327037 . G . PASS END=220327037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:47:26:0,47,886:0,47,255:25,0 chr2 220327038 . T . PASS END=220327039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,947:0,78,255:26,0 chr2 220327040 . A . PASS END=220327040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,878:0,39,255:24,0 chr2 220327041 . G . PASS END=220327043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 220327044 . A . PASS END=220327044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:45:26:0,45,845:0,45,255:23,0 chr2 220327045 . G . PASS END=220327050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 220327051 . G . PASS END=220327051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:26,0 chr2 220327052 . C . PASS END=220327052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 220327053 . C . PASS END=220327053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,839:0,48,255:25,0 chr2 220327054 . A . PASS END=220327054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 220327055 . A . PASS END=220327055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,898:0,48,255:25,0 chr2 220327056 . G . PASS END=220327059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,826:0,64,255:26,0 chr2 220327060 . T . PASS END=220327060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:25,0 chr2 220327061 . C . PASS END=220327061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220327062 . A . PASS END=220327062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,925:0,50,255:25,0 chr2 220327063 . T . PASS END=220327063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220327064 . C . PASS END=220327064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,845:0,48,255:24,0 chr2 220327065 . A . LowGQ END=220327065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,4:27:0:27:0,0,729:8,0,255:22,0 chr2 220327066 . T . PASS END=220327066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220327067 . G . PASS END=220327067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 220327068 . A . PASS END=220327068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220327069 . G . PASS END=220327069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,888:0,50,255:25,0 chr2 220327070 . C . PASS END=220327092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:24:0,64,850:0,64,255:26,0 chr2 220327093 . A . PASS END=220327093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 220327094 . G . PASS END=220327094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220327095 . C . PASS END=220327096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:22,0 chr2 220327097 . T . PASS END=220327097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220327098 . G . PASS END=220327098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:22,0 chr2 220327099 . T . PASS END=220327100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220327101 . G . PASS END=220327101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,737:0,39,255:21,0 chr2 220327102 . T . PASS END=220327103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,732:0,55,255:21,0 chr2 220327104 . T . PASS END=220327105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 220327106 . C . PASS END=220327106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,719:0,55,255:21,0 chr2 220327107 . T . PASS END=220327108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 220329155 . G . PASS END=220329169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,372:0,33,255:13,0 chr2 220329170 . G . PASS END=220329174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 220329175 . T . PASS END=220329175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220329176 . G . PASS END=220329204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:17,0 chr2 220329205 . A . PASS END=220329205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 220329206 . G . PASS END=220329274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,615:0,51,255:19,0 chr2 220329275 . C . PASS END=220329275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 220329276 . A . PASS END=220329292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,568:0,48,255:16,0 chr2 220329293 . T . PASS END=220329304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:13:0,39,482:0,39,255:13,0 chr2 220329305 . G . PASS END=220329309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220329310 . A . PASS END=220329320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220329321 . G . PASS END=220329321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 220329322 . A . PASS END=220329330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220330779 . G . PASS END=220330786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1440:0,111,255:34,0 chr2 220331896 . C . PASS END=220331903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,701:0,60,255:22,0 chr2 220331904 . G . PASS END=220331905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 220331906 . A . PASS END=220331907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,792:0,66,255:22,0 chr2 220331908 . G . PASS END=220331908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 220331909 . C . PASS END=220331918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,856:0,62,255:26,0 chr2 220331919 . G . PASS END=220331920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:25,0 chr2 220331921 . C . PASS END=220331921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220331922 . G . PASS END=220331922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:26,0 chr2 220331923 . T . PASS END=220331923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,900:0,29,255:25,0 chr2 220331924 . G . PASS END=220331924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 220331925 . C . PASS END=220331925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220331926 . T . PASS END=220331926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:26,0 chr2 220331927 . G . PASS END=220331928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220331929 . C . PASS END=220331929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 220331930 . C . PASS END=220331963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1039:0,84,255:32,0 chr2 220331964 . A . PASS END=220331964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,997:0,79,255:29,0 chr2 220331965 . T . PASS END=220331970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:30,0 chr2 220331971 . T . PASS END=220331971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:28,0 chr2 220331972 . G . PASS END=220331980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 220331981 . C . PASS END=220331981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 220331982 . C . PASS END=220331984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 220331985 . G . PASS END=220331985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:29,0 chr2 220331986 . T . PASS END=220332006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1133:0,90,255:32,0 chr2 220332007 . A . PASS END=220332052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,72,255:26,0 chr2 220332053 . C . PASS END=220332062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 220332063 . A . PASS END=220332070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220332071 . C . PASS END=220332087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 220332088 . A . PASS END=220332089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 220332090 . C . PASS END=220332091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr2 220332092 . G . PASS END=220332112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,474:0,39,255:13,0 chr2 220332113 . G . PASS END=220332118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 220332119 . C . PASS END=220332123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220332124 . G . PASS END=220332124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:10,0 chr2 220332125 . C . PASS END=220332136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:11,0 chr2 220332137 . C . PASS END=220332137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:11,0 chr2 220332138 . A . PASS END=220332138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220332139 . A . LowGQ END=220332139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,404:0,0,255:11,0 chr2 220332140 . G . PASS END=220332141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:23:13:0,23,449:0,23,255:12,0 chr2 220332142 . T . PASS END=220332143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220332144 . A . PASS END=220332144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 220332145 . G . PASS END=220332145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220332146 . C . PASS END=220332151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,558:0,45,255:15,0 chr2 220332152 . C . PASS END=220332152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 220332153 . A . PASS END=220332154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:15,0 chr2 220332155 . A . PASS END=220332155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:14,0 chr2 220332156 . G . PASS END=220332156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 220333300 . A . PASS END=220333301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220333302 . G . PASS END=220333302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,674:0,44,255:19,0 chr2 220333303 . A . PASS END=220333312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,721:0,60,255:23,0 chr2 220333313 . C . PASS END=220333313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:22,0 chr2 220333314 . A . PASS END=220333340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:25,0 chr2 220333341 . T . PASS END=220333341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:47:27:0,47,772:0,47,255:22,0 chr2 220333342 . T . PASS END=220333358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:24,0 chr2 220333359 . C . PASS END=220333360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:56:24:0,56,853:0,56,255:19,0 chr2 220333361 . G . PASS END=220333361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220333362 . C . PASS END=220333370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:53:21:0,53,806:0,53,255:19,0 chr2 220333371 . G . PASS END=220333371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,745:0,32,255:18,0 chr2 220333372 . A . PASS END=220333379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 220333380 . G . PASS END=220333388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220333389 . G . PASS END=220333400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 220333401 . C . PASS END=220333401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr2 220333402 . G . PASS END=220333405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,684:0,57,255:19,0 chr2 220333406 . C . PASS END=220333406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr2 220333407 . G . PASS END=220333410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 220333411 . G . PASS END=220333411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 220333412 . C . PASS END=220333429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,643:0,40,255:19,0 chr2 220333430 . G . PASS END=220333430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 220333431 . C . PASS END=220333431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 220333432 . C . PASS END=220333433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 220333434 . C . PASS END=220333435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 220333436 . T . PASS END=220333436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr2 220333437 . G . PASS END=220333439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 220333440 . G . PASS END=220333440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 220333441 . T . PASS END=220333448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr2 220333449 . A . PASS END=220333449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,510:0,29,255:13,0 chr2 220333450 . C . PASS END=220333450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220333451 . T . PASS END=220333451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:13,0 chr2 220333452 . C . PASS END=220333452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220333453 . A . PASS END=220333453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220333454 . T . PASS END=220333454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220333455 . T . PASS END=220333455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 220333456 . T . PASS END=220333456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220333457 . T . PASS END=220333457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 220333458 . G . PASS END=220333458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220333581 . G . PASS END=220333595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,545:0,48,255:17,0 chr2 220333596 . A . PASS END=220333596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 220333597 . G . PASS END=220333620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:19:0,43,629:0,43,255:18,0 chr2 220333621 . G . PASS END=220333646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:21:0,62,776:0,62,255:26,0 chr2 220333647 . T . PASS END=220333657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,964:0,84,255:31,0 chr2 220333658 . G . PASS END=220333658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr2 220333659 . G . PASS END=220333664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 220333665 . A . PASS END=220333665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 220333666 . G . PASS END=220333666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220333667 . G . PASS END=220333674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 220333675 . G . PASS END=220333685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220333686 . T . PASS END=220333700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1000:0,68,255:27,0 chr2 220333701 . C . PASS END=220333701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220333702 . C . PASS END=220333702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:26,0 chr2 220333703 . C . PASS END=220333704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 220333705 . T . PASS END=220333726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:26:0,66,990:0,78,255:26,0 chr2 220333727 . C . PASS END=220333727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,870:0,42,255:22,0 chr2 220333728 . A . PASS END=220333733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,990:0,65,255:22,0 chr2 220333734 . A . PASS END=220333734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 220333735 . T . PASS END=220333745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,823:0,66,255:22,0 chr2 220333746 . C . PASS END=220333746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220333747 . C . PASS END=220333748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220333749 . G . PASS END=220333749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:19,0 chr2 220333750 . G . PASS END=220333756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220333757 . G . PASS END=220333757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 220333758 . C . PASS END=220333759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 220333760 . T . PASS END=220333770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,698:0,44,255:19,0 chr2 220333878 . C . PASS END=220333881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 220333882 . A . PASS END=220333882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,823:0,41,255:23,0 chr2 220333883 . A . PASS END=220333898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,795:0,72,255:26,0 chr2 220333899 . A . PASS END=220333912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,972:0,81,255:29,0 chr2 220333913 . A . PASS END=220333937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1078:0,84,255:34,0 chr2 220333938 . G . PASS END=220333938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1224:0,50,255:32,0 chr2 220333939 . C . PASS END=220333949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1294:0,89,255:37,0 chr2 220333950 . T C, 155.34 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,20,0:0,16,0:105:193,108,0,293,293,293:255,111,0:0,0:1.5534e+02,1.0534e+02,0.0000e+00,2.9011e+02,3.2488e+02,2.9312e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,23,13:0,0,19,17 chr2 220333951 . G . PASS END=220333954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,105,1412:0,111,255:37,0 chr2 220333955 . T . PASS END=220333955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1195:0,78,255:33,0 chr2 220333956 . C . PASS END=220333987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:83:37:0,83,1349:0,83,255:40,0 chr2 220333988 . T . PASS END=220334097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:37:0,87,1305:0,87,255:40,0 chr2 220334098 . C . PASS END=220334099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:33:0,60,900:0,99,255:21,0 chr2 220334100 . G . PASS END=220334101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:57:33:0,57,855:0,82,255:19,0 chr2 220334105 . C . PASS END=220334105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:51:33:0,51,765:0,99,255:17,0 chr2 220336590 . A . PASS END=220336594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,987:0,84,255:29,0 chr2 220336595 . G . PASS END=220336595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 220336596 . A . PASS END=220336639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:28:0,84,1066:0,84,255:33,0 chr2 220336640 . G . PASS END=220336642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:26,0 chr2 220336643 . G . PASS END=220336664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1078:0,84,255:29,0 chr2 220336665 . A . PASS END=220336665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,942:0,48,255:27,0 chr2 220336666 . C . PASS END=220336691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:24:0,60,900:0,68,255:24,0 chr2 220336692 . C . PASS END=220336693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,861:0,56,255:21,0 chr2 220336694 . C . PASS END=220336694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220336695 . A . PASS END=220336695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,751:0,36,255:19,0 chr2 220336696 . C . PASS END=220336696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:20,0 chr2 220336697 . C . PASS END=220336700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220336701 . A . PASS END=220336701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,714:0,46,255:20,0 chr2 220336702 . T . PASS END=220336705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,767:0,60,255:20,0 chr2 220336706 . A . PASS END=220336709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220336949 . A . PASS END=220336949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 220336950 . T . PASS END=220336973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:23:0,61,845:0,61,255:26,0 chr2 220336974 . C . PASS END=220336974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 220336975 . G . PASS END=220336978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:71:27:0,71,1039:0,71,255:27,0 chr2 220336979 . C . PASS END=220336990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1117:0,87,255:30,0 chr2 220336991 . C . PASS END=220336991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 220336992 . T . PASS END=220336992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 220336993 . G . PASS END=220336993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr2 220336994 . T . PASS END=220337001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:30,0 chr2 220337002 . A . PASS END=220337002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 220337003 . G . PASS END=220337004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 220337005 . A . PASS END=220337032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,945:0,68,255:26,0 chr2 220337033 . G . PASS END=220337053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,651:0,41,255:19,0 chr2 220337612 . A . PASS END=220337619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220337620 . T . PASS END=220337620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220337621 . C . PASS END=220337624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220337625 . G . PASS END=220337633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,651:0,48,255:17,0 chr2 220337634 . A . PASS END=220337634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 220337635 . G . PASS END=220337636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 220337637 . G . PASS END=220337637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,696:0,44,255:19,0 chr2 220337638 . C . PASS END=220337653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 220337654 . G . PASS END=220337654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,792:0,30,255:21,0 chr2 220337655 . C . PASS END=220337656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220337657 . C . PASS END=220337658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,770:0,30,255:21,0 chr2 220337659 . G . PASS END=220337661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,892:0,69,255:23,0 chr2 220337662 . C . PASS END=220337662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 220337663 . A . PASS END=220337673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220337674 . C . PASS END=220337675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 220337676 . G . PASS END=220337680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220337681 . C . PASS END=220337687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220337688 . G . PASS END=220337688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:18,0 chr2 220337689 . C . PASS END=220337691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220337692 . G . PASS END=220337735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,792:0,66,255:25,0 chr2 220337736 . C . PASS END=220337736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 220337737 . A . PASS END=220337746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:25:0,62,922:0,62,255:25,0 chr2 220337747 . T . PASS END=220337747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 220337748 . C . PASS END=220337765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr2 220337766 . G . PASS END=220337766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:19,0 chr2 220337767 . A . PASS END=220337767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 220337768 . G . PASS END=220337768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 220337769 . C . PASS END=220337773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 220337774 . G . PASS END=220337774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:18,0 chr2 220337775 . C . PASS END=220337776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220337777 . A . PASS END=220337790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:21:0,48,720:0,53,255:19,0 chr2 220337791 . T . PASS END=220337791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:16,0 chr2 220337792 . C . PASS END=220337799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:17:0,44,675:0,44,255:16,0 chr2 220337800 . G . PASS END=220337800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 220337801 . T . PASS END=220337801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 220337802 . G . PASS END=220337802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,529:0,12,255:14,0 chr2 220337803 . C . PASS END=220337807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220337808 . G . PASS END=220337809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 220337810 . T . PASS END=220337811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220337812 . G . PASS END=220337812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 220337813 . A . PASS END=220337813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 220337814 . G . PASS END=220337814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,541:0,18,255:14,0 chr2 220337815 . C . PASS END=220337818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:17,0 chr2 220338226 . G . PASS END=220338230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr2 220338231 . A . PASS END=220338251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:25,0 chr2 220338252 . A . PASS END=220338272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,922:0,84,255:29,0 chr2 220338273 . G . PASS END=220338273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 220338274 . T . PASS END=220338322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:33,0 chr2 220338323 . T . PASS END=220338323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1202:0,71,255:31,0 chr2 220338324 . G . PASS END=220338341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:30:0,81,1215:0,90,255:33,0 chr2 220338342 . T . PASS END=220338342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220338343 . G . PASS END=220338346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220338347 . G . PASS END=220338349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 220338450 . C . PASS END=220338450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 220338451 . T . PASS END=220338457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,1030:0,68,255:26,0 chr2 220338458 . G . PASS END=220338461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220338462 . C . PASS END=220338464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1000:0,68,255:25,0 chr2 220338465 . C . PASS END=220338468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220338469 . G . PASS END=220338481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,963:0,78,255:26,0 chr2 220338482 . G . PASS END=220338495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,1008:0,81,255:30,0 chr2 220338496 . A . PASS END=220338496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 220338497 . G . PASS END=220338514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1141:0,87,255:30,0 chr2 220338515 . A . PASS END=220338515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 220338516 . G . PASS END=220338521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:31,0 chr2 220338522 . T . PASS END=220338522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,987:0,66,255:29,0 chr2 220338523 . C . PASS END=220338569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:30:0,81,1215:0,86,255:33,0 chr2 220338570 . C . PASS END=220338584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,81,255:26,0 chr2 220338585 . T . PASS END=220338585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:24,0 chr2 220338586 . C . PASS END=220338597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:60:25:0,60,900:0,65,255:25,0 chr2 220338598 . A . PASS END=220338599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 220338600 . C . PASS END=220338605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 220338606 . G . PASS END=220338606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:19,0 chr2 220338607 . G . PASS END=220338612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220338613 . T . PASS END=220338613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,675:0,49,255:20,0 chr2 220338614 . T . PASS END=220338623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 220338624 . A . PASS END=220338625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,782:0,50,255:19,0 chr2 220341592 . A . PASS END=220341612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,996:0,81,255:35,0 chr2 220341613 . T . PASS END=220341613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1100:0,55,255:32,0 chr2 220341614 . C . PASS END=220341618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1230:0,105,255:35,0 chr2 220341619 . A . PASS END=220341619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:34,0 chr2 220341620 . G . PASS END=220341643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:35:0,92,1274:0,92,255:37,0 chr2 220341644 . A . PASS END=220341644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:34,0 chr2 220341645 . A . PASS END=220341701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:81:35:0,81,1215:0,81,255:38,0 chr2 220341702 . A . PASS END=220341704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:75:34:0,75,1125:0,102,255:26,0 chr2 220341999 . G . PASS END=220342065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:33:0,90,1243:0,90,255:40,0 chr2 220342066 . T . PASS END=220342066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1534:0,74,255:38,0 chr2 220342067 . G . PASS END=220342134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:32:0,81,1172:0,83,255:40,0 chr2 220342135 . T . PASS END=220342135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1003:0,63,255:26,0 chr2 220342136 . C . PASS END=220342136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 220342137 . T . PASS END=220342160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr2 220342161 . C . PASS END=220342162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:21,0 chr2 220342163 . T . PASS END=220342166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 220342167 . G . PASS END=220342167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 220342407 . C . PASS END=220342407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 220342411 . C . PASS END=220342412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220342413 . C . PASS END=220342416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1011:0,51,255:26,0 chr2 220342417 . C . PASS END=220342504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:30:0,81,1186:0,86,255:38,0 chr2 220342505 . C . PASS END=220342507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:25,0 chr2 220342627 . G . PASS END=220342641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,784:0,63,255:23,0 chr2 220342642 . C . PASS END=220342642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 220342643 . T . PASS END=220342669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:23:0,65,990:0,65,255:26,0 chr2 220342670 . G . PASS END=220342680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1047:0,84,255:28,0 chr2 220342681 . T . PASS END=220342681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 220342682 . G . PASS END=220342684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220342685 . G . PASS END=220342690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220342691 . T . PASS END=220342694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220342695 . T . PASS END=220342701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220342702 . C . PASS END=220342707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1119:0,84,255:30,0 chr2 220342708 . C . PASS END=220342732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1062:0,74,255:26,0 chr2 220342733 . G . PASS END=220342733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:23,0 chr2 220342734 . A . PASS END=220342740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,953:0,62,255:25,0 chr2 220342741 . G . PASS END=220342741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 220342742 . C . PASS END=220342758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:71:25:0,71,1039:0,71,255:26,0 chr2 220342759 . G . PASS END=220342759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220342760 . C . PASS END=220342763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:71:29:0,71,1061:0,71,255:26,0 chr2 220342764 . A . PASS END=220342764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:27,0 chr2 220342765 . C . PASS END=220342765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 220342766 . T . PASS END=220342766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:27,0 chr2 220342767 . G . PASS END=220342768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220342769 . G . PASS END=220342790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,862:0,61,255:26,0 chr2 220342791 . T . PASS END=220342798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,59,255:19,0 chr2 220342799 . C . PASS END=220342808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 220342809 . T . PASS END=220342809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 220342810 . G . PASS END=220342817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220342818 . T . PASS END=220342818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,743:0,27,255:20,0 chr2 220342819 . C . PASS END=220342820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220342821 . C . PASS END=220342821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 220342822 . C . PASS END=220342823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,853:0,66,255:22,0 chr2 220342824 . A . PASS END=220342824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,731:0,49,255:20,0 chr2 220342825 . G . PASS END=220342825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,775:0,35,255:20,0 chr2 220342826 . C . PASS END=220342827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220343866 . C . PASS END=220343923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:38:0,101,1410:0,101,255:40,0 chr2 220344505 . A . PASS END=220344582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:30:0,90,1119:0,90,255:37,0 chr2 220344684 . C . PASS END=220344847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:32:0,80,1135:0,80,255:40,0 chr2 220344848 . A . PASS END=220344848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:29,0 chr2 220344849 . G . PASS END=220344854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 220344855 . G . PASS END=220344862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:26,0 chr2 220345393 . G . PASS END=220345419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,108,1584:0,108,255:40,0 chr2 220346026 . T . PASS END=220346178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:45:0,114,1661:0,116,255:40,0 chr2 220346360 . G . PASS END=220346402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:81,1:82:99:78:0,120,1800:0,196,255:40,0 chr2 220347506 . A . PASS END=220347510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:31,0 chr2 220347511 . G . PASS END=220347511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:30,0 chr2 220347512 . G . PASS END=220347542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:86:31:0,86,1050:0,86,255:37,0 chr2 220347543 . T . PASS END=220347543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1251:0,69,255:35,0 chr2 220347544 . G . PASS END=220347574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1252:0,92,255:37,0 chr2 220347820 . C . PASS END=220347829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:12,0 chr2 220347830 . T . PASS END=220347830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 220347831 . C . PASS END=220347839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:12,0 chr2 220347840 . A . PASS END=220347840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:11,0 chr2 220347841 . T . PASS END=220347841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 220347842 . G . PASS END=220347854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,398:0,36,255:13,0 chr2 220347855 . G . PASS END=220347855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 220347856 . C . PASS END=220347859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 220347860 . C . PASS END=220347871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:20:10:0,20,360:0,20,255:9,0 chr2 220347872 . T . PASS END=220347872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:7,0 chr2 220347873 . G . PASS END=220347877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,349:0,27,255:9,0 chr2 220347878 . G . LowGQ END=220347878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:0:9:0,0,279:4,0,255:8,0 chr2 220347879 . G . PASS END=220347912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr2 220347913 . A . PASS END=220347913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 220347914 . G . PASS END=220347925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:13,0 chr2 220347926 . C . PASS END=220347934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 220347935 . G . PASS END=220347935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220347936 . G . PASS END=220347937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220347938 . T . PASS END=220347938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,443:0,28,255:13,0 chr2 220347939 . C . PASS END=220347961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:14,0 chr2 220347962 . A . PASS END=220347964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220347965 . A . PASS END=220347965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 220347966 . A . PASS END=220347970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220347971 . T . PASS END=220347971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 220347972 . G . PASS END=220347991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:13,0 chr2 220347992 . C . PASS END=220348011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:7:0,21,249:0,21,249:8,0 chr2 220348012 . T . PASS END=220348012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,208:0,4,208:5,0 chr2 220348013 . T . PASS END=220348047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,141:6,0 chr2 220348048 . A . LowGQ END=220348052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,1:4:0:4:0,0,78:0,0,82:3,0 chr2 220348053 . G . PASS END=220348054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 220348055 . A . LowGQ END=220348055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,139:2,0,140:3,0 chr2 220348056 . T . PASS END=220348070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,172:0,15,172:6,0 chr2 220348071 . C . PASS END=220348071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:6,0 chr2 220348072 . C . PASS END=220348084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,243:0,24,243:8,0 chr2 220348085 . C . LowGQ END=220348085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,218:7,0,225:7,0 chr2 220348086 . T . PASS END=220348112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 220348113 . G . PASS END=220348125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 220348126 . T . LowGQ END=220348126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,269:3,0,255:8,0 chr2 220348127 . C . PASS END=220348127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:10,0 chr2 220348128 . T . PASS END=220348128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 220348129 . C . PASS END=220348138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,341:0,30,255:11,0 chr2 220348139 . A . PASS END=220348140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,378:0,20,255:11,0 chr2 220348141 . G . PASS END=220348142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220348143 . T . LowGQ END=220348143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,2:12:0:12:0,0,302:19,0,255:8,0 chr2 220348144 . C . PASS END=220348159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,335:0,30,255:10,0 chr2 220348160 . T . PASS END=220348160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,288:0,13,255:9,0 chr2 220348161 . C . PASS END=220348164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,372:0,30,255:11,0 chr2 220348165 . T . PASS END=220348165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220348166 . C . PASS END=220348167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 220348168 . C . PASS END=220348168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220348169 . C . PASS END=220348187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,366:0,33,255:11,0 chr2 220348188 . T . PASS END=220348189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,319:0,16,255:10,0 chr2 220348190 . G . PASS END=220348194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220348195 . A . PASS END=220348195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,343:0,19,255:9,0 chr2 220348196 . G . PASS END=220348197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220348198 . C . PASS END=220348198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 220348199 . C . PASS END=220348199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220348200 . C . PASS END=220348203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220348204 . C . PASS END=220348210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220348211 . A . PASS END=220348236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:8:0,24,302:0,24,255:9,0 chr2 220348237 . A . PASS END=220348237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,225:0,7,225:7,0 chr2 220348238 . G . PASS END=220348244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,24,255:9,0 chr2 220348245 . G . PASS END=220348245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 220348246 . C . PASS END=220348251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,311:0,27,255:9,0 chr2 220348252 . G . PASS END=220348252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 220348253 . C . PASS END=220348256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:8,0 chr2 220348257 . G . PASS END=220348257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:6,0 chr2 220348258 . C . PASS END=220348262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 220348263 . G . PASS END=220348263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 220348264 . G . PASS END=220348264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:7,0 chr2 220348265 . A . PASS END=220348267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,270:0,10,255:7,0 chr2 220348268 . T . LowGQ END=220348271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:0:8:0,0,233:0,0,233:6,0 chr2 220348272 . C . PASS END=220348273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:18:8:0,18,270:0,24,255:6,0 chr2 220348274 . G . PASS END=220348274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,255:0,7,255:5,0 chr2 220348275 . G . PASS END=220348275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:15:8:0,15,225:0,24,255:5,0 chr2 220348276 . G . PASS END=220348280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,135:0,4,208:5,0 chr2 220348281 . G . PASS END=220348296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:11:6:0,11,210:0,11,210:6,0 chr2 220348297 . G . PASS END=220348327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,241:0,21,241:7,0 chr2 220348328 . C . PASS END=220348328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,216:0,4,216:6,0 chr2 220348329 . G . PASS END=220348339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:10:7:0,10,225:0,10,219:6,0 chr2 220348340 . G . PASS END=220348348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 220348349 . G . PASS END=220348358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,365:0,30,255:12,0 chr2 220348359 . G . PASS END=220348366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 220348367 . G . PASS END=220348388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 220348389 . G . PASS END=220348395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220348396 . C . PASS END=220348401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220348402 . C . PASS END=220348432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 220348433 . A . PASS END=220348474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,457:0,36,255:13,0 chr2 220348475 . G . PASS END=220348476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,559:0,45,255:15,0 chr2 220348477 . C . PASS END=220348477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 220348478 . G . PASS END=220348496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,537:0,45,255:15,0 chr2 220348497 . G . PASS END=220348508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 220348509 . C . PASS END=220348515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220348516 . G . PASS END=220348516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 220348517 . A . PASS END=220348521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220348522 . G . PASS END=220348522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 220348523 . C . PASS END=220348527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220348528 . C . PASS END=220348528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220348529 . A . PASS END=220348529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220348530 . C . PASS END=220348552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 220348553 . G . PASS END=220348553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 220348554 . G . PASS END=220348554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 220348555 . G . PASS END=220348555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 220348556 . G . PASS END=220348563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr2 220348564 . A . PASS END=220348564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr2 220348565 . A . PASS END=220348568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 220348569 . C . PASS END=220348569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 220348570 . A . PASS END=220348572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220348573 . A . PASS END=220348573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 220348574 . G . PASS END=220348575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220348576 . T . PASS END=220348580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 220348581 . C . PASS END=220348581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:10,0 chr2 220348582 . C . PASS END=220348582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 220348583 . A . PASS END=220348583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:9,0 chr2 220348584 . G . PASS END=220348604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,443:0,36,255:12,0 chr2 220348605 . C . PASS END=220348605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 220348606 . C . PASS END=220348624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,449:0,36,255:12,0 chr2 220348625 . C . PASS END=220348625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 220348626 . G . PASS END=220348636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 220348637 . T . PASS END=220348637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220348638 . C . PASS END=220348638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 220348639 . C . PASS END=220348646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 220348647 . C . PASS END=220348658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220348659 . C . PASS END=220348671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220348672 . G . PASS END=220348674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220348675 . T . PASS END=220348675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr2 220348676 . C . PASS END=220348721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:13,0 chr2 220348722 . A . PASS END=220348762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 220348763 . A . PASS END=220348763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:8,0 chr2 220348764 . A . PASS END=220348765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220348766 . C . PASS END=220348776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,418:0,33,255:12,0 chr2 220348777 . A . PASS END=220348777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 220348778 . C . PASS END=220348778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 220348779 . A . PASS END=220348779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:10,0 chr2 220348780 . C . LowGQ END=220348780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,380:3,0,255:10,0 chr2 220348781 . C . PASS END=220348781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220348782 . T . LowGQ END=220348782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,426:0,0,255:11,0 chr2 220348783 . A . PASS END=220348784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220348785 . T . LowGQ END=220348785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,410:0,0,255:11,0 chr2 220348786 . G . PASS END=220348787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 220348788 . T . PASS END=220348788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 220348789 . G . PASS END=220348789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,393:0,6,255:11,0 chr2 220348790 . C . PASS END=220348796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 220348797 . G . PASS END=220348798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220348799 . C . PASS END=220348799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220348800 . C . PASS END=220348800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220348801 . C . PASS END=220348801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,498:0,9,255:14,0 chr2 220348802 . C . PASS END=220348804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220348805 . C . PASS END=220348805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:14,0 chr2 220348806 . A . PASS END=220348806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 220348807 . C . PASS END=220348818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 220348819 . C . PASS END=220348819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 220348820 . A . PASS END=220348820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220348821 . A . PASS END=220348821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220348822 . G . PASS END=220348825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,543:0,42,255:14,0 chr2 220348826 . A . PASS END=220348826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 220348827 . G . PASS END=220348829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 220348830 . T . PASS END=220348830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 220348831 . C . PASS END=220348837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 220348838 . C . PASS END=220348845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220348846 . G . PASS END=220348849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220348850 . C . PASS END=220348850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:13,0 chr2 220348851 . A . PASS END=220348857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 220348858 . G . PASS END=220348858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 220348859 . C . PASS END=220348861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,519:0,42,255:14,0 chr2 220348862 . C . PASS END=220348884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,435:0,36,255:12,0 chr2 220348885 . G . PASS END=220348885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr2 220348886 . C . PASS END=220348898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:13,0 chr2 220348899 . A . PASS END=220348900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,435:0,25,255:11,0 chr2 220348901 . C . PASS END=220348903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:12,0 chr2 220348904 . T . PASS END=220348905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,396:0,12,255:12,0 chr2 220348906 . C . PASS END=220348909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr2 220348910 . T . PASS END=220348910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,449:0,12,255:10,0 chr2 220348911 . C . PASS END=220348911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 220348912 . A . PASS END=220348912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:10,0 chr2 220348913 . C . PASS END=220348913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 220348914 . A . PASS END=220348914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:9,0 chr2 220348915 . C . PASS END=220348935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 220348936 . T . PASS END=220348936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 220348937 . C . PASS END=220348940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,418:0,33,255:11,0 chr2 220348941 . C . PASS END=220348941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220348942 . C . PASS END=220348950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220348951 . G . PASS END=220348961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220348962 . G . PASS END=220348965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 220348966 . C . PASS END=220349004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr2 220349005 . C . PASS END=220349009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 220349010 . C . PASS END=220349011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220349012 . C . PASS END=220349123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,365:0,30,255:13,0 chr2 220349124 . C . PASS END=220349130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,529:0,45,255:15,0 chr2 220349131 . C . PASS END=220349140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 220349141 . G . PASS END=220349142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 220349143 . C . PASS END=220349143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 220349144 . T . PASS END=220349144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 220349145 . C . PASS END=220349145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:15,0 chr2 220349146 . A . PASS END=220349177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,599:0,51,255:17,0 chr2 220349178 . C . PASS END=220349178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 220349179 . G . PASS END=220349186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 220349187 . G . PASS END=220349187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 220349188 . G . PASS END=220349201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,543:0,45,255:16,0 chr2 220349202 . C . PASS END=220349208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:35:17:0,35,585:0,35,255:13,0 chr2 220349209 . G . PASS END=220349225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:15,0 chr2 220349226 . G . PASS END=220349233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 220349234 . G . PASS END=220349234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 220349235 . G . PASS END=220349264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,457:0,36,255:13,0 chr2 220349265 . C . PASS END=220349265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:11,0 chr2 220349266 . G . PASS END=220349269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 220349270 . C . PASS END=220349270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 220349271 . C . PASS END=220349273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 220349274 . C . PASS END=220349274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 220349275 . C . PASS END=220349284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,443:0,36,255:12,0 chr2 220349285 . A . PASS END=220349285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 220349286 . G . PASS END=220349293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220349294 . A . PASS END=220349299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:21:10:0,21,315:0,30,255:9,0 chr2 220349300 . T . PASS END=220349302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220349303 . A . PASS END=220349304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220349305 . C . PASS END=220349312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220349313 . C . PASS END=220349315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 220349316 . G . PASS END=220349330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr2 220349331 . G . PASS END=220349333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220349334 . G . PASS END=220349344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 220349345 . G . PASS END=220349346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220349347 . C . PASS END=220349410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 220349411 . T . PASS END=220349411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,291:0,19,255:10,0 chr2 220349412 . C . PASS END=220349422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,390:0,33,255:12,0 chr2 220349423 . T . PASS END=220349423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,386:0,20,255:10,0 chr2 220349424 . G . PASS END=220349429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,352:0,33,255:11,0 chr2 220349430 . G . PASS END=220349430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220349431 . C . PASS END=220349447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,398:0,33,255:12,0 chr2 220349448 . T . LowGQ END=220349448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:10,0 chr2 220349449 . C . PASS END=220349451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr2 220349452 . G . PASS END=220349452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,358:0,22,255:11,0 chr2 220349453 . C . PASS END=220349465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:12,0 chr2 220349466 . G . PASS END=220349466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 220349467 . G . PASS END=220349469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220349470 . T . PASS END=220349470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 220349471 . G . PASS END=220349474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 220349475 . G . PASS END=220349475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 220349476 . G . PASS END=220349476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 220349477 . C . PASS END=220349477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 220349478 . C . PASS END=220349479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220349480 . G . PASS END=220349480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:13,0 chr2 220349481 . C . PASS END=220349481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220349482 . G . PASS END=220349482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 220349483 . G . PASS END=220349485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 220349486 . G . PASS END=220349486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:10,0 chr2 220349487 . G . PASS END=220349487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 220349488 . G . PASS END=220349488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220349489 . A . PASS END=220349489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:13,0 chr2 220349490 . C . PASS END=220349490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220349491 . G . PASS END=220349491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 220349492 . G . PASS END=220349496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:15,0 chr2 220349497 . A . PASS END=220349497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,452:0,31,255:14,0 chr2 220349498 . G . PASS END=220349499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220349500 . T . PASS END=220349500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr2 220349501 . C . PASS END=220349501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220349502 . G . PASS END=220349502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,435:0,15,255:13,0 chr2 220349503 . G . PASS END=220349504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220349505 . G . PASS END=220349512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:15:0,31,540:0,31,255:13,0 chr2 220349513 . G . PASS END=220349514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:25:14:0,25,457:0,25,255:12,0 chr2 220349515 . T . PASS END=220349549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 220349550 . G . PASS END=220349550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 220349551 . C . PASS END=220349555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220349556 . G . PASS END=220349581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,319:0,27,255:9,0 chr2 220349582 . G . PASS END=220349601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:12,0 chr2 220349602 . A . PASS END=220349602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 220349603 . G . PASS END=220349614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 220349615 . C . PASS END=220349617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,566:0,12,255:14,1 chr2 220349618 . G . PASS END=220349625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,520:0,42,255:14,0 chr2 220349626 . T . PASS END=220349654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,488:0,39,255:13,0 chr2 220349655 . G . PASS END=220349665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,566:0,45,255:16,0 chr2 220349666 . C . PASS END=220349666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 220349667 . C . PASS END=220349676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,598:0,48,255:16,0 chr2 220349677 . G . PASS END=220349677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 220349678 . G . PASS END=220349681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 220349682 . G . PASS END=220349683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,521:0,32,255:15,0 chr2 220349684 . G . PASS END=220349698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,670:0,51,255:19,0 chr2 220349699 . G . PASS END=220349699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 220349700 . C . PASS END=220349700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:19,0 chr2 220349701 . C . PASS END=220349713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:22,0 chr2 220349714 . A . PASS END=220349714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 220349715 . G . PASS END=220349717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,748:0,66,255:23,0 chr2 220349718 . G . PASS END=220349718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 220349719 . G . PASS END=220349721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,876:0,69,255:23,0 chr2 220349722 . G . PASS END=220349722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 220349723 . C . PASS END=220349729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,869:0,69,255:23,0 chr2 220349730 . C . PASS END=220349730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 220349731 . G . PASS END=220349740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,869:0,69,255:23,0 chr2 220349741 . C . PASS END=220349741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 220349742 . G . PASS END=220349747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 220349748 . C . PASS END=220349748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 220349749 . G . PASS END=220349757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,869:0,69,255:23,0 chr2 220349758 . C . PASS END=220349758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:20,0 chr2 220349759 . T . PASS END=220349763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,861:0,69,255:23,0 chr2 220349764 . T . PASS END=220349764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 220349765 . C . PASS END=220349767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,801:0,69,255:23,0 chr2 220349768 . A . PASS END=220349768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 220349769 . G . PASS END=220349769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 220349770 . G . PASS END=220349772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:22,0 chr2 220349773 . A . PASS END=220349776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,817:0,69,255:23,0 chr2 220349777 . C . PASS END=220349778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:22,0 chr2 220349779 . A . PASS END=220349785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,837:0,69,255:24,0 chr2 220349786 . G . PASS END=220349786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 220349787 . C . PASS END=220349789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 220349790 . C . PASS END=220349790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:22,0 chr2 220349791 . T . PASS END=220349791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220349792 . C . PASS END=220349794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:54:25:0,54,801:0,58,255:19,0 chr2 220350068 . C . PASS END=220350087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:26,0 chr2 220350088 . C . PASS END=220350181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:27:0,80,1016:0,80,255:35,0 chr2 220350182 . A . PASS END=220350182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:26,0 chr2 220350183 . C . PASS END=220350184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220350185 . T . PASS END=220350186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220350187 . C . PASS END=220350189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220350190 . A . PASS END=220350199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1008:0,68,255:26,0 chr2 220351552 . T . PASS END=220351552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr2 220351553 . A . PASS END=220351553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,980:0,81,255:27,0 chr2 220351554 . C . PASS END=220351554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:27,0 chr2 220351555 . C . PASS END=220351560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:28,0 chr2 220351561 . T . PASS END=220351561 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,884:0,51,255:25,0 chr2 220351562 . T . PASS END=220351564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220351565 . C . PASS END=220351566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1037:0,71,255:27,0 chr2 220351567 . T . PASS END=220351572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1149:0,87,255:31,0 chr2 220351573 . C . PASS END=220351573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:30,0 chr2 220351574 . A . PASS END=220351583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1163:0,80,255:32,0 chr2 220351584 . A . PASS END=220351584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,994:0,79,255:30,0 chr2 220351585 . A . PASS END=220351621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1136:0,80,255:33,0 chr2 220351622 . G . PASS END=220351626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 220351627 . C . PASS END=220351627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:25,0 chr2 220351628 . C . PASS END=220351650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 220351651 . A . PASS END=220351657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 220351658 . A . PASS END=220351664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 220351665 . A . PASS END=220351679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,607:0,44,255:17,0 chr2 220352916 . A . PASS END=220352940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr2 220352941 . A . PASS END=220352941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:21,0 chr2 220352942 . C . PASS END=220352955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:23,0 chr2 220352956 . G . PASS END=220352956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 220352957 . C . PASS END=220352969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 220352970 . A . PASS END=220352970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:21,0 chr2 220352971 . G . PASS END=220352980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:23,0 chr2 220352981 . C . PASS END=220352981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 220352982 . T . PASS END=220352991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,939:0,72,255:25,0 chr2 220352992 . G . PASS END=220352992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 220352993 . C . PASS END=220352995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220352996 . G . PASS END=220352996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:20,0 chr2 220352997 . C . PASS END=220352999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 220353000 . C . PASS END=220353001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:25:0,42,630:0,75,255:14,0 chr2 220353002 . T . PASS END=220353012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:33:14:0,33,495:0,42,255:13,0 chr2 220353013 . G . PASS END=220353013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:10,0 chr2 220353014 . C . PASS END=220353024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220353025 . G . PASS END=220353025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr2 220353026 . A . PASS END=220353027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220353028 . G . PASS END=220353028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:8,0 chr2 220353029 . A . PASS END=220353030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220353031 . A . PASS END=220353031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 220353032 . G . PASS END=220353032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220353220 . A . PASS END=220353248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:21:0,60,900:0,63,255:25,0 chr2 220353249 . G . PASS END=220353252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1139:0,87,255:30,0 chr2 220353253 . T . PASS END=220353253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 220353254 . C . PASS END=220353259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1139:0,80,255:33,0 chr2 220353260 . G . PASS END=220353260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:33,0 chr2 220353261 . T . PASS END=220353357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1172:0,83,255:36,0 chr2 220353358 . T . PASS END=220353358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1194:0,63,255:29,0 chr2 220353359 . C . PASS END=220353362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 220353363 . A . PASS END=220353385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:27:0,61,1080:0,61,255:26,0 chr2 220353386 . C . PASS END=220353387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 220353500 . G . PASS END=220353527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,937:0,62,255:26,0 chr2 220353528 . G . PASS END=220353535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220353536 . A . PASS END=220353537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 220353538 . A . PASS END=220353540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220353541 . T . PASS END=220353541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 220353542 . A . PASS END=220353542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 220353543 . C . PASS END=220353547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 220353548 . A . PASS END=220353550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:30:0,84,1260:0,90,255:28,0 chr2 220353551 . C . PASS END=220353552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1086:0,74,255:25,0 chr2 220353553 . G . PASS END=220353558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 220353559 . G . PASS END=220353570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:27:0,67,978:0,67,255:26,0 chr2 220353571 . C . PASS END=220353576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 220353577 . G . PASS END=220353610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:25,0 chr2 220353611 . G . PASS END=220353622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,60,255:19,0 chr2 220353776 . G . PASS END=220353870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:29:0,81,1102:0,87,255:37,0 chr2 220353871 . G . PASS END=220353909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:26,0 chr2 220353910 . T . PASS END=220353943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:19:0,45,675:0,57,255:19,0 chr2 220354058 . A . PASS END=220354061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 220354062 . T . PASS END=220354062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 220354063 . T . PASS END=220354074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 220354075 . T . PASS END=220354075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:10,0 chr2 220354076 . C . PASS END=220354090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 220354091 . A . PASS END=220354091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,311:0,16,255:10,0 chr2 220354092 . G . PASS END=220354102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,410:0,33,255:12,0 chr2 220354103 . C . PASS END=220354103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 220354104 . C . PASS END=220354110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 220354111 . C . PASS END=220354111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:10,0 chr2 220354112 . C . PASS END=220354124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220354125 . G . PASS END=220354141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 220354142 . C . PASS END=220354152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 220354153 . C . PASS END=220354159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220354160 . T . PASS END=220354160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:10,0 chr2 220354161 . A . PASS END=220354171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,427:0,36,255:12,0 chr2 220354172 . C . PASS END=220354172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 220354173 . C . PASS END=220354176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220354177 . A . LowGQ END=220354177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,313:3,0,255:10,0 chr2 220354178 . C . PASS END=220354179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220354180 . C . PASS END=220354180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,349:0,19,255:10,0 chr2 220354181 . C . PASS END=220354184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220354185 . G . LowGQ END=220354185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:8,0 chr2 220354186 . T . PASS END=220354187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220354188 . A . PASS END=220354188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:9,0 chr2 220354189 . G . PASS END=220354189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220354190 . T . PASS END=220354190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:8,0 chr2 220354191 . C . PASS END=220354193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220354194 . T . PASS END=220354194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,327:0,16,255:8,0 chr2 220354195 . G . PASS END=220354196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220354197 . C . PASS END=220354197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,304:0,16,255:8,0 chr2 220354198 . A . PASS END=220354200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220354201 . C . PASS END=220354201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:9,0 chr2 220354202 . C . PASS END=220354203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 220354204 . T . LowGQ END=220354206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,217:1,0,242:9,0 chr2 220354207 . T . PASS END=220354208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,280:0,13,255:9,0 chr2 220354209 . T . PASS END=220354209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 220354210 . C . LowGQ END=220354210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:8,0 chr2 220354211 . C . PASS END=220354215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,380:0,30,255:11,0 chr2 220354216 . A . PASS END=220354216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:10,0 chr2 220354217 . C . PASS END=220354217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,410:0,33,255:11,0 chr2 220354218 . A . LowGQ END=220354218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,327:6,0,255:9,0 chr2 220354219 . C . PASS END=220354219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:9,0 chr2 220354220 . C . PASS END=220354220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220354221 . T . LowGQ END=220354221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,3:12:0:12:0,0,285:28,0,255:8,0 chr2 220354222 . C . PASS END=220354223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220354224 . T . PASS END=220354226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,321:0,19,255:10,0 chr2 220354227 . C . PASS END=220354231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220354232 . C . PASS END=220354232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:10,0 chr2 220354233 . C . PASS END=220354235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220354236 . G . LowGQ END=220354238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:14:0,0,371:0,0,255:11,0 chr2 220354239 . C . PASS END=220354239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 220354240 . T . LowGQ END=220354242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:0:15:0,0,382:0,0,255:12,0 chr2 220354243 . C . PASS END=220354243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,551:0,17,255:13,0 chr2 220354244 . T . PASS END=220354245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,498:0,31,255:13,0 chr2 220354246 . A . PASS END=220354246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,490:0,9,255:13,0 chr2 220354247 . A . PASS END=220354250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:31:16:0,31,543:0,31,255:13,0 chr2 220354251 . T . PASS END=220354251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,443:0,3,255:13,0 chr2 220354252 . G . PASS END=220354253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 220354254 . G . PASS END=220354281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:15,0 chr2 220354282 . A . PASS END=220354283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220354284 . A . PASS END=220354289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 220354290 . G . PASS END=220354290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 220354291 . G . PASS END=220354321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,590:0,48,255:20,0 chr2 220354322 . C . PASS END=220354340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,737:0,60,255:21,0 chr2 220354341 . C . PASS END=220354342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220354343 . C . PASS END=220354357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,745:0,60,255:21,0 chr2 220354358 . A . PASS END=220354359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,729:0,47,255:20,0 chr2 220354360 . C . PASS END=220354361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220354362 . T . PASS END=220354362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 220354363 . T . PASS END=220354367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220354368 . C . PASS END=220354368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 220354369 . C . PASS END=220354369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220354370 . T . PASS END=220354370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,676:0,24,255:19,0 chr2 220354371 . T . PASS END=220354375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220354376 . C . PASS END=220354386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:21:0,50,767:0,50,255:19,0 chr2 220354387 . A . PASS END=220354388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220354389 . C . PASS END=220354390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220354391 . C . PASS END=220354403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 220354404 . T . PASS END=220354404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 220354405 . C . PASS END=220354419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,853:0,66,255:23,0 chr2 220354420 . G . PASS END=220354420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr2 220354421 . T . PASS END=220354456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,931:0,64,255:26,0 chr2 220354457 . T . PASS END=220354457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220354458 . T . PASS END=220354468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:28:0,70,964:0,70,255:26,0 chr2 220354469 . C . PASS END=220354469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220354470 . A . PASS END=220354470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 220354471 . C . PASS END=220354471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1063:0,84,255:28,0 chr2 220354472 . C . PASS END=220354490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:26:0,68,978:0,68,255:26,0 chr2 220354491 . C . PASS END=220354511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1209:0,84,255:33,0 chr2 220354512 . T . PASS END=220354512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 220354513 . A . PASS END=220354596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:31:0,83,1164:0,83,255:33,0 chr2 220354597 . G . PASS END=220354621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:24:0,69,878:0,72,255:26,0 chr2 220354622 . C . PASS END=220354638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:44:20:0,44,675:0,44,255:19,0 chr2 220354639 . A . PASS END=220354639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,637:0,21,255:15,0 chr2 220354640 . C . PASS END=220354652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:16,0 chr2 220354653 . G . PASS END=220354661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220355131 . G . PASS END=220355135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,894:0,75,255:26,0 chr2 220355136 . G . PASS END=220355163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,942:0,81,255:31,0 chr2 220355164 . G . PASS END=220355165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,957:0,76,255:30,0 chr2 220355166 . A . PASS END=220355166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1186:0,93,255:31,0 chr2 220355167 . T . PASS END=220355167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1057:0,76,255:29,0 chr2 220355168 . G . PASS END=220355179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:32,0 chr2 220355180 . A . PASS END=220355180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1064:0,57,255:31,0 chr2 220355181 . C . PASS END=220355206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1141:0,80,255:32,0 chr2 220355207 . G . PASS END=220355207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1147:0,66,255:27,0 chr2 220355208 . C . PASS END=220355228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1156:0,80,255:31,0 chr2 220355229 . T . PASS END=220355235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:31:0,66,1139:0,66,255:26,0 chr2 220355236 . G . PASS END=220355243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:28:0,81,1215:0,84,255:27,0 chr2 220355244 . A . PASS END=220355266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,992:0,65,255:26,0 chr2 220355267 . G . PASS END=220355270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 220355271 . G . PASS END=220355271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:26,0 chr2 220355272 . G . PASS END=220355273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220355274 . T . PASS END=220355289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:26:0,68,1030:0,68,255:26,0 chr2 220355290 . G . PASS END=220355298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 220355299 . C . PASS END=220355300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 220355301 . C . PASS END=220355301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220355302 . C . PASS END=220355304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220355305 . T . PASS END=220355307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220355308 . G . PASS END=220355308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 220355309 . T . PASS END=220355321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1072:0,90,255:30,0 chr2 220355322 . T . PASS END=220355322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:28,0 chr2 220355323 . T . PASS END=220355332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1133:0,93,255:31,0 chr2 220355333 . T . PASS END=220355333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:30,0 chr2 220355334 . G . PASS END=220355370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:31:0,80,1133:0,80,255:34,0 chr2 220355455 . G . PASS END=220355456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1313:0,75,255:34,0 chr2 220355457 . T . PASS END=220355459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,99,1485:0,111,255:34,0 chr2 220355460 . G . PASS END=220355464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:66:35:0,66,1213:0,66,255:33,0 chr2 220355465 . T . PASS END=220355465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:31,0 chr2 220355466 . C . PASS END=220355469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:32,0 chr2 220355470 . G . PASS END=220355472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:33,0 chr2 220355473 . T . PASS END=220355476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:67:35:0,67,1263:0,67,255:37,0 chr2 220355477 . G . PASS END=220355477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 220355478 . T . PASS END=220355478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1380:0,76,255:36,0 chr2 220355479 . G . PASS END=220355479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 220355480 . G . PASS END=220355483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1299:0,75,255:35,0 chr2 220355484 . C . PASS END=220355484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 220355485 . T . PASS END=220355488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:62:39:0,62,1327:0,62,255:33,0 chr2 220355489 . A . PASS END=220355491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:37:0,96,1440:0,111,255:32,0 chr2 220355492 . G . PASS END=220355492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1305:0,75,255:33,0 chr2 220355493 . T . PASS END=220355502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr2 220355503 . A . PASS END=220355503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1178:0,63,255:32,0 chr2 220355504 . C . PASS END=220355528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:34:0,93,1395:0,102,255:36,0 chr2 220355529 . A G, 47.65 PASS DP=37;MQ=250.00;MQRankSum=5.038;ReadPosRankSum=1.508;FractionInformativeReads=0.973;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:21,15,0:0.417,0.000:36:7,8,0:14,7,0:47:82,0,50,499,743,1242:255,0,255:19,0:4.7645e+01,9.6556e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,7,4,11:8,13,9,6 chr2 220355530 . C . PASS END=220355538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:94:36:0,94,1280:0,94,255:35,0 chr2 220355539 . C . PASS END=220355539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:33,0 chr2 220355540 . C . PASS END=220355564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:33:0,86,1225:0,86,255:34,0 chr2 220355565 . T . PASS END=220355565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1070:0,44,255:26,0 chr2 220355566 . G . PASS END=220355566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 220355567 . C . PASS END=220355570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 220355571 . T . PASS END=220355574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:77:31:0,77,1086:0,77,255:27,0 chr2 220355575 . C . PASS END=220355576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 220355577 . C . PASS END=220355577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220355578 . T . PASS END=220355578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220355579 . G . PASS END=220355582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 220355583 . A . PASS END=220355583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:37:28:0,37,921:0,37,255:22,0 chr2 220355584 . T . PASS END=220355614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,680:0,66,255:24,0 chr2 220355615 . C . PASS END=220355651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,615:0,40,255:19,0 chr2 220355652 . A . PASS END=220355653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 220355654 . C . PASS END=220355668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,592:0,51,255:17,0 chr2 220355669 . G . PASS END=220355677 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,495:0,31,255:13,0 chr2 220355678 . G . PASS END=220355678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:10,0 chr2 220356516 . C . PASS END=220356523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,978:0,78,255:26,0 chr2 220356524 . A . PASS END=220356531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:30,0 chr2 220356532 . G . PASS END=220356532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 220356533 . G . PASS END=220356591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:32:0,89,1089:0,89,255:38,0 chr2 220356833 . G . PASS END=220356843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,737:0,57,255:19,0 chr2 220356844 . G . PASS END=220356850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,714:0,57,255:19,0 chr2 220356851 . G . PASS END=220356871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,745:0,60,255:26,0 chr2 220356872 . G . PASS END=220356900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1025:0,81,255:28,0 chr2 220356901 . G . PASS END=220356906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 220356907 . A . PASS END=220356907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220356908 . T . PASS END=220356911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:25,0 chr2 220356912 . T . PASS END=220356912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1015:0,49,255:25,0 chr2 220356913 . T . PASS END=220356913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220356914 . C . PASS END=220356919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1023:0,81,255:27,0 chr2 220356920 . G . PASS END=220356964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,815:0,66,255:24,0 chr2 220356965 . T . PASS END=220356974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,66,255:18,0 chr2 220356975 . C . PASS END=220356982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:33:16:0,33,495:0,38,255:12,0 chr2 220357288 . G . PASS END=220357291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220357292 . A . PASS END=220357296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:22,0 chr2 220357297 . C . PASS END=220357297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 220357298 . C . PASS END=220357298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,814:0,38,255:19,0 chr2 220357299 . C . PASS END=220357319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,762:0,63,255:21,0 chr2 220357320 . C . PASS END=220357320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 220357321 . G . PASS END=220357335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,792:0,66,255:26,0 chr2 220357336 . A . PASS END=220357336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:25,0 chr2 220357337 . C . PASS END=220357395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,62,255:26,0 chr2 220357396 . T . PASS END=220357404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:18,0 chr2 220357405 . C . PASS END=220357412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,655:0,60,255:21,0 chr2 220357413 . C . PASS END=220357413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220357414 . G . PASS END=220357425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:21,0 chr2 220357426 . T . PASS END=220357428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220357429 . T . PASS END=220357429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220357430 . G . PASS END=220357439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220357440 . C . PASS END=220357443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220357444 . G . PASS END=220357444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220357445 . G . PASS END=220357451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:23,0 chr2 220357452 . G . PASS END=220357452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,770:0,52,255:22,0 chr2 220357453 . C . PASS END=220357467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,845:0,69,255:23,0 chr2 220357468 . G . PASS END=220357468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 220357469 . C . PASS END=220357473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220357474 . A . PASS END=220357474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220357475 . G . PASS END=220357486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220357487 . C . PASS END=220357498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 220357499 . C . PASS END=220357502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:18:0,39,585:0,54,255:13,0 chr2 220357503 . C . PASS END=220357507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 220357508 . G . PASS END=220357508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 220361077 . A . PASS END=220361082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,782:0,63,255:24,0 chr2 220361083 . A . PASS END=220361083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 220361084 . A . PASS END=220361114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,909:0,72,255:26,0 chr2 220361115 . G . PASS END=220361139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:32,0 chr2 220361140 . G . PASS END=220361140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:31,0 chr2 220361141 . A . PASS END=220361161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:33:0,83,1194:0,83,255:36,0 chr2 220361162 . A . PASS END=220361162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1197:0,69,255:29,0 chr2 220361163 . G . PASS END=220361174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:30,0 chr2 220361175 . T . PASS END=220361195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 220361196 . G . PASS END=220361204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 220361531 . G . PASS END=220361550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,890:0,66,255:25,0 chr2 220361551 . A . PASS END=220361552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1086:0,84,255:29,0 chr2 220361553 . A . PASS END=220361553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 220361554 . A . PASS END=220361698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:29:0,84,1080:0,86,255:40,0 chr2 220361699 . G . PASS END=220361700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1277:0,78,255:32,0 chr2 220361701 . A . PASS END=220361708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1264:0,92,255:34,0 chr2 220361709 . G . PASS END=220361710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1209:0,75,255:31,0 chr2 220361711 . C . PASS END=220361717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:34:0,87,1263:0,89,255:31,0 chr2 220361718 . G . PASS END=220361718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1182:0,74,255:29,0 chr2 220361719 . A . PASS END=220361723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:31,0 chr2 220361724 . G . PASS END=220361733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,93,255:26,0 chr2 220361734 . C . PASS END=220361734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 220361735 . A . PASS END=220361735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 220361736 . C . PASS END=220361759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1164:0,83,255:31,0 chr2 220361760 . G . PASS END=220361760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:27,0 chr2 220361761 . C . PASS END=220361761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 220361762 . A . PASS END=220361763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 220361764 . A . PASS END=220361776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:29,0 chr2 220361777 . C . PASS END=220361778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 220361779 . G . PASS END=220361787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 220361788 . T . PASS END=220361788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 220361789 . C . PASS END=220361789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220361790 . A . PASS END=220361791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220361792 . C . PASS END=220361799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 220361800 . T . PASS END=220361800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220361801 . C . PASS END=220361805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220361806 . A . PASS END=220361828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,61,255:25,0 chr2 220361829 . C . PASS END=220361829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 220361830 . T . PASS END=220361833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 220361834 . G . PASS END=220361838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 220362442 . T . PASS END=220362443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220362444 . C . PASS END=220362444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,0 chr2 220362445 . C . PASS END=220362457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 220362458 . A . PASS END=220362463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,678:0,60,255:21,0 chr2 220362464 . A . PASS END=220362464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:20,0 chr2 220362465 . C . PASS END=220362483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,776:0,63,255:24,0 chr2 220362484 . G . PASS END=220362484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:21,0 chr2 220362485 . C . PASS END=220362519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,884:0,66,255:25,0 chr2 220362520 . T . PASS END=220362542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:23:0,62,945:0,62,255:25,0 chr2 220362543 . G . PASS END=220362543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:24,0 chr2 220362544 . G . PASS END=220362548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 220362549 . A . PASS END=220362549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:23,0 chr2 220362550 . C . PASS END=220362556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,929:0,65,255:23,0 chr2 220362557 . C T, 49.19 PASS DP=25;MQ=249.38;MQRankSum=4.188;ReadPosRankSum=2.162;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,11,0:0.440,0.000:25:7,6,0:7,5,0:48:84,0,50,357,471,827:255,0,255:14,0:4.9192e+01,7.4034e-05,5.3000e+01,3.5664e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,10,7,4:9,5,8,3 chr2 220362558 . G . PASS END=220362566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,845:0,69,255:23,0 chr2 220362567 . A . PASS END=220362567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 220362568 . T . PASS END=220362568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 220362569 . C . PASS END=220362569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 220362570 . G . PASS END=220362572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,839:0,69,255:23,0 chr2 220362573 . G . PASS END=220362573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,770:0,38,255:21,0 chr2 220362574 . A . PASS END=220362574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220362575 . G . PASS END=220362576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 220362577 . A . PASS END=220362577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,781:0,36,255:20,0 chr2 220362578 . T . PASS END=220362578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 220362579 . G . PASS END=220362579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220362580 . A . PASS END=220362583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,810:0,53,255:18,0 chr2 220362773 . G . PASS END=220362773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 220362774 . G . PASS END=220362787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,975:0,81,255:29,0 chr2 220362788 . C . PASS END=220362788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 220362789 . G . PASS END=220362795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1072:0,87,255:29,0 chr2 220362796 . C . PASS END=220362796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:28,0 chr2 220362797 . C . PASS END=220362804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1064:0,87,255:30,0 chr2 220362805 . C . PASS END=220362805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:29,0 chr2 220362806 . G . PASS END=220362819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1133:0,90,255:30,0 chr2 220362820 . G . PASS END=220362820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 220362821 . G . PASS END=220362848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1125:0,80,255:32,0 chr2 220362849 . G . PASS END=220362851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 220362852 . G . PASS END=220362852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220362853 . T . PASS END=220362861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:27:0,75,1125:0,81,255:26,0 chr2 220362862 . A . PASS END=220362880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:25,0 chr2 220362881 . C . PASS END=220362895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,681:0,41,255:19,0 chr2 220362896 . C . PASS END=220362896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 220362897 . G . PASS END=220362898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 220362899 . C G, 37.23 PASS DP=18;MQ=250.00;MQRankSum=2.920;ReadPosRankSum=1.752;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:14,4,0:0.222,0.000:18:8,3,0:6,1,0:37:72,0,50,143,501,644:101,0,255:13,0:3.7225e+01,8.4448e-04,5.3001e+01,1.4311e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,8,2,2:6,8,1,3 chr2 220362900 . G . PASS END=220362911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,651:0,41,255:17,0 chr2 220364698 . A . PASS END=220364737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:31:0,90,1114:0,93,255:34,0 chr2 220364843 . G . PASS END=220364940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:32:0,84,1260:0,95,255:40,0 chr2 220366198 . G . PASS END=220366301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:37:0,93,1268:0,93,255:40,0 chr2 220366573 . G . PASS END=220366575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 220366576 . C . PASS END=220366576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:16,0 chr2 220366577 . C . PASS END=220366593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr2 220366594 . C . PASS END=220366599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:26,0 chr2 220366600 . C . PASS END=220366735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:80:28:0,80,1075:0,80,255:40,0 chr2 220366736 . C . PASS END=220366759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:25:0,66,954:0,67,255:25,0 chr2 220367104 . G . PASS END=220367163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:93:41:0,93,1504:0,93,255:40,0 chr2 220368805 . G . PASS END=220368935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:51:0,120,1800:0,132,255:40,0 chr2 220369576 . C . PASS END=220369576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,3:55:71:55:0,71,1817:0,71,255:40,0 chr2 220369577 . T . PASS END=220369590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,2:56:99:54:0,113,1800:0,113,255:40,0 chr2 220369950 . G . PASS END=220369954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:25,0 chr2 220369955 . A . PASS END=220369955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 220369956 . C . PASS END=220369957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,931:0,75,255:25,0 chr2 220369958 . C . PASS END=220369961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 220369962 . A . PASS END=220369963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,961:0,65,255:27,0 chr2 220369964 . G . PASS END=220369964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 220369965 . C . PASS END=220369965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,976:0,68,255:26,0 chr2 220369966 . T . PASS END=220369978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1039:0,81,255:30,0 chr2 220369979 . C . PASS END=220369979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 220369980 . A . PASS END=220370080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:29:0,81,1058:0,82,255:35,0 chr2 220370081 . C . PASS END=220370084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:30:0,63,945:0,90,255:23,0 chr2 220370180 . T . PASS END=220370227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,65,255:26,0 chr2 220370228 . T . PASS END=220370229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 220370230 . A . PASS END=220370230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:27,0 chr2 220370231 . C . PASS END=220370240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 220370241 . C . PASS END=220370243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1061:0,71,255:26,0 chr2 220370244 . G . PASS END=220370249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 220370250 . C . PASS END=220370253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 220370254 . C . PASS END=220370258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220370259 . G . PASS END=220370259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1076:0,74,255:26,0 chr2 220370260 . G . PASS END=220370265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 220370266 . C . PASS END=220370304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:22:0,60,900:0,66,255:25,0 chr2 220370305 . T . PASS END=220370305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:24,0 chr2 220370306 . T . PASS END=220370339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,931:0,69,255:25,0 chr2 220370340 . T . PASS END=220370340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 220370341 . T . PASS END=220370360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 220370361 . A . PASS END=220370361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 220370362 . A . PASS END=220370368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 220370369 . A . PASS END=220370374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:22:0,57,855:0,66,255:19,0 chr2 220370375 . G . PASS END=220370382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,709:0,60,255:20,0 chr2 220370383 . C . PASS END=220370388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220370389 . A . PASS END=220370391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220370392 . T . PASS END=220370410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,654:0,44,255:19,0 chr2 220370411 . C . PASS END=220370418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:22,0 chr2 220370419 . C . PASS END=220370444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:19:0,51,765:0,57,255:19,0 chr2 220370445 . T . PASS END=220370474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,798:0,63,255:22,0 chr2 220370475 . T . PASS END=220370475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:20,0 chr2 220370476 . C . PASS END=220370480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 220370481 . G . PASS END=220370483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:21:0,51,765:0,63,255:18,0 chr2 220370702 . C . PASS END=220370728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,909:0,72,255:25,0 chr2 220370729 . G . PASS END=220370729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 220370730 . G . PASS END=220370736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 220370737 . C . PASS END=220370758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:42:17:0,42,630:0,51,255:19,0 chr2 220370759 . C . PASS END=220370769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 220370770 . C . PASS END=220370779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220370780 . G . PASS END=220370785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220370786 . A . PASS END=220370786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 220370787 . C . PASS END=220370788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220370789 . T . PASS END=220370790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 220370791 . G . PASS END=220370791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 220370792 . C . PASS END=220370792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 220370793 . A . PASS END=220370794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220370976 . G . PASS END=220370980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 220370981 . C . PASS END=220370990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:10,0 chr2 220370991 . C . PASS END=220370992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220370993 . G . PASS END=220371015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,427:0,36,255:13,0 chr2 220371016 . G . PASS END=220371043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:17,0 chr2 220371044 . G . PASS END=220371056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 220371057 . G . PASS END=220371072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:18:0,54,599:0,54,255:18,0 chr2 220371073 . A . PASS END=220371073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:16,0 chr2 220371074 . T . PASS END=220371083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:18:0,43,668:0,43,255:19,0 chr2 220371084 . C . PASS END=220371084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220371085 . G . PASS END=220371085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,713:0,47,255:19,0 chr2 220371086 . C . PASS END=220371098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220371099 . A . PASS END=220371099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 220371100 . G . PASS END=220371114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:22,0 chr2 220371115 . G . PASS END=220371115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 220371116 . G . PASS END=220371119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,831:0,66,255:22,0 chr2 220371120 . C . PASS END=220371120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:20,0 chr2 220371121 . T . PASS END=220371134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220371135 . A . PASS END=220371137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 220371138 . A . PASS END=220371139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 220371140 . C . PASS END=220371143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220371144 . G . PASS END=220371170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,706:0,57,255:19,0 chr2 220371171 . G . PASS END=220371171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220371172 . G . PASS END=220371173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220371174 . G . PASS END=220371176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220371177 . C . PASS END=220371180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 220371181 . T A, 110.17 PASS DP=21;MQ=249.44;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,21,0:1.000,0.000:21:0,15,0:0,6,0:60:148,63,0,799,63,806:255,63,0:0,0:1.1017e+02,6.0172e+01,4.1418e-06,4.5000e+02,9.4971e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,11:0,0,14,7 chr2 220371182 . C . PASS END=220371188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:17,0 chr2 220371420 . G . PASS END=220371520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:93:37:0,93,1349:0,98,255:40,0 chr2 220379066 . A . PASS END=220379124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr2 220379125 . C . PASS END=220379125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 220379126 . A . PASS END=220379136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,352:0,33,255:13,0 chr2 220379137 . C . PASS END=220379137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:13,0 chr2 220379138 . G . PASS END=220379146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,491:0,42,255:15,0 chr2 220379147 . C . PASS END=220379148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 220379149 . C . PASS END=220379149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220379150 . G . PASS END=220379151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 220379152 . A . PASS END=220379152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220379153 . G . PASS END=220379153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220379154 . G . PASS END=220379155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220379156 . G . PASS END=220379156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220379157 . C . PASS END=220379157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220379158 . T . PASS END=220379161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220379162 . A . PASS END=220379162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 220379163 . G . PASS END=220379164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220379165 . T . PASS END=220379165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,495:0,23,255:15,0 chr2 220379166 . G . PASS END=220379166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 220379167 . T . PASS END=220379168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 220379169 . C . PASS END=220379169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,3:17:1:17:0,1,463:0,1,255:13,0 chr2 220379170 . T . PASS END=220379178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,629:0,51,255:17,0 chr2 220379179 . T . PASS END=220379179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,559:0,12,255:14,0 chr2 220379180 . A . PASS END=220379180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr2 220379181 . A . PASS END=220379182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 220379183 . G . PASS END=220379183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:14,0 chr2 220379184 . G . PASS END=220379191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,523:0,48,255:16,0 chr2 220379192 . A . PASS END=220379192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 220379193 . A . PASS END=220379197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:16,0 chr2 220379198 . A . PASS END=220379198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,499:0,34,255:15,0 chr2 220379199 . C . PASS END=220379207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 220379208 . A . PASS END=220379208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,533:0,32,255:14,0 chr2 220379209 . G . PASS END=220379210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220379211 . G . PASS END=220379211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 220379212 . A . PASS END=220379215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220379216 . A . PASS END=220379217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:14,0 chr2 220379218 . G . PASS END=220379218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220379219 . C . PASS END=220379219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 220379220 . G . PASS END=220379225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220379226 . A . PASS END=220379226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220379227 . G . PASS END=220379227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220379228 . A . PASS END=220379248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 220379249 . C . PASS END=220379251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220379252 . C . PASS END=220379261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220379262 . G . PASS END=220379264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220379265 . C . PASS END=220379265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 220379266 . T . PASS END=220379267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 220379268 . C . PASS END=220379268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 220379269 . T . PASS END=220379269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:11,0 chr2 220379270 . G . PASS END=220379296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,426:0,33,255:13,0 chr2 220379297 . G . PASS END=220379309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:9:0,24,360:0,27,255:9,0 chr2 220379310 . T . PASS END=220379326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 220379327 . C . PASS END=220379337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 220379338 . T . PASS END=220379396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,335:0,30,255:13,0 chr2 220379397 . G . PASS END=220379400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220379401 . G . PASS END=220379411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220379412 . G . PASS END=220379412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 220379413 . G . PASS END=220379416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 220379417 . G . PASS END=220379435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,599:0,51,255:19,0 chr2 220379436 . G . PASS END=220379436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 220379437 . C . PASS END=220379445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,676:0,57,255:19,0 chr2 220379446 . G . PASS END=220379449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,754:0,60,255:21,0 chr2 220379450 . C . PASS END=220379451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220379452 . G . PASS END=220379458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220379459 . A . PASS END=220379459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:19,0 chr2 220379460 . T . PASS END=220379474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,707:0,63,255:21,0 chr2 220379475 . A . PASS END=220379475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,722:0,32,255:20,0 chr2 220379476 . A . PASS END=220379491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,823:0,63,255:24,0 chr2 220379492 . G . PASS END=220379492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 220379493 . C . PASS END=220379501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,854:0,72,255:26,0 chr2 220379502 . A . PASS END=220379507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,867:0,81,255:28,0 chr2 220379508 . A . PASS END=220379522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:26:0,66,947:0,67,255:26,0 chr2 220379523 . A . PASS END=220379539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:23,0 chr2 220379540 . G . PASS END=220379541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:49:22:0,49,737:0,49,255:20,0 chr2 220379542 . T . PASS END=220379545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 220379546 . G . PASS END=220379546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 220379547 . C . PASS END=220379554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:23,0 chr2 220379555 . G . PASS END=220379555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr2 220379556 . C . PASS END=220379559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 220379560 . C G, 121.78 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,14,0:0,11,0:72:160,75,0,928,75,928:255,75,0:0,0:1.2178e+02,7.1777e+01,2.5886e-07,4.5000e+02,1.0655e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,13,12:0,0,14,11 chr2 220379561 . C . PASS END=220379570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:25,0 chr2 220379571 . T . PASS END=220379571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:24,0 chr2 220379572 . G . PASS END=220379579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,836:0,62,255:26,0 chr2 220379580 . T . PASS END=220379590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:28,0 chr2 220379591 . A . PASS END=220379592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:70:29:0,70,994:0,70,255:27,0 chr2 220379593 . C . PASS END=220379593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:25,0 chr2 220379594 . A . PASS END=220379597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,978:0,67,255:26,0 chr2 220379598 . T . PASS END=220379602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 220379603 . G . PASS END=220379604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220379605 . A . PASS END=220379605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 220379606 . C . PASS END=220379606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220379607 . T . PASS END=220379635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,939:0,78,255:26,0 chr2 220379636 . G . PASS END=220379636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220379637 . G . PASS END=220379642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 220379643 . G . PASS END=220379691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1197:0,89,255:35,0 chr2 220379692 . G . PASS END=220379692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1217:0,66,255:31,0 chr2 220379693 . T . PASS END=220379728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1147:0,80,255:32,0 chr2 220379729 . C . PASS END=220379729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1130:0,63,255:27,0 chr2 220379730 . G . PASS END=220379741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1164:0,93,255:32,0 chr2 220379742 . T . PASS END=220379742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1114:0,63,255:28,0 chr2 220379743 . G . PASS END=220379750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:29,0 chr2 220379751 . A . PASS END=220379751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1164:0,60,255:26,0 chr2 220379752 . C . PASS END=220379753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,96,255:28,0 chr2 220379754 . C . PASS END=220379754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:28,0 chr2 220379755 . C . PASS END=220379767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1109:0,80,255:29,0 chr2 220379768 . C . PASS END=220379768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1100:0,63,255:28,0 chr2 220379769 . C . PASS END=220379775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:29:0,81,1117:0,87,255:30,0 chr2 220379776 . G . PASS END=220379778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220379779 . C . PASS END=220379782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220379783 . C . PASS END=220379783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:26,0 chr2 220379784 . C . PASS END=220379784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220379785 . G . PASS END=220379839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:25:0,64,862:0,64,255:26,0 chr2 220379840 . G . PASS END=220379847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,988:0,81,255:31,0 chr2 220379848 . C . PASS END=220379848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:29,0 chr2 220379849 . C . PASS END=220379863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1125:0,80,255:30,0 chr2 220379864 . A . PASS END=220379864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 220379865 . C . PASS END=220379866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220379867 . G . PASS END=220379867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1078:0,79,255:28,0 chr2 220379868 . G . PASS END=220379879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1147:0,80,255:30,0 chr2 220379880 . A . PASS END=220379881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:73:30:0,73,987:0,73,255:27,0 chr2 220379882 . G . PASS END=220379884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 220379885 . C . PASS END=220379885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 220379886 . G . PASS END=220379890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1117:0,80,255:30,0 chr2 220379891 . G . PASS END=220379905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:66:25:0,66,925:0,68,255:25,0 chr2 220379906 . G . PASS END=220379906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 220379907 . G . PASS END=220379937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:23:0,66,839:0,69,255:25,0 chr2 220379938 . C . PASS END=220379938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 220379939 . A . PASS END=220379956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1000:0,75,255:26,0 chr2 220379957 . C . PASS END=220379959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220379960 . C . PASS END=220379984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,889:0,65,255:26,0 chr2 220379985 . G . PASS END=220379985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr2 220379986 . C . PASS END=220380028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,861:0,69,255:25,0 chr2 220396480 . G . PASS END=220396498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,615:0,51,255:18,0 chr2 220396499 . A . PASS END=220396499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 220396500 . G . PASS END=220396500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 220396501 . T . PASS END=220396501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,541:0,21,255:13,0 chr2 220396502 . G . PASS END=220396512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 220396513 . A . PASS END=220396513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,502:0,15,255:13,0 chr2 220396514 . A . PASS END=220396514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,541:0,32,255:13,0 chr2 220396515 . C . PASS END=220396522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 220396523 . C . PASS END=220396523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 220396524 . G . PASS END=220396525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220396526 . G . PASS END=220396526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 220396527 . G . PASS END=220396530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,590:0,48,255:16,0 chr2 220396531 . T . PASS END=220396531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 220396532 . C . PASS END=220396534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 220396535 . T . PASS END=220396535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:14,0 chr2 220396536 . G . PASS END=220396546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:16,0 chr2 220396547 . C . LowGQ END=220396547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:14,0 chr2 220396548 . A . PASS END=220396549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,582:0,12,255:15,0 chr2 220396550 . G . PASS END=220396592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,607:0,48,255:18,0 chr2 220396593 . G . PASS END=220396593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 220396594 . G . PASS END=220396620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,599:0,51,255:18,0 chr2 220396621 . A . PASS END=220396621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,576:0,37,255:16,0 chr2 220396622 . C . PASS END=220396624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:19,0 chr2 220396723 . A . PASS END=220396727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,816:0,61,255:26,0 chr2 220396728 . A . PASS END=220396728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,934:0,81,255:27,0 chr2 220396729 . C . PASS END=220396792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:61:26:0,61,870:0,61,255:26,0 chr2 220396793 . G . PASS END=220396793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:25,0 chr2 220396794 . C . PASS END=220396812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 220396813 . C . PASS END=220396826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:41:19:0,41,681:0,41,255:19,0 chr2 220396827 . T . PASS END=220396827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,503:0,18,255:17,0 chr2 220396828 . T . PASS END=220396842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,673:0,41,255:17,0 chr2 220396843 . A . PASS END=220396843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr2 220396844 . A . PASS END=220396846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220396847 . G . PASS END=220396850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:17:0,36,540:0,51,255:12,0 chr2 220397037 . C . PASS END=220397059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 220397060 . G . PASS END=220397063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:14,0 chr2 220397064 . A . PASS END=220397084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 220397085 . C . PASS END=220397088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:15,0 chr2 220397089 . G . PASS END=220397089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 220397090 . G . PASS END=220397102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr2 220397103 . C . PASS END=220397103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:15,0 chr2 220397104 . A . PASS END=220397124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,598:0,41,255:18,0 chr2 220397125 . T . PASS END=220397125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,571:0,21,255:15,0 chr2 220397126 . G . PASS END=220397145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,651:0,51,255:19,0 chr2 220397146 . G . PASS END=220397146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:17,0 chr2 220397147 . T . PASS END=220397155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 220397156 . G . PASS END=220397160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220397161 . T . PASS END=220397162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220397163 . C . PASS END=220397164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220397165 . T . PASS END=220397196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,637:0,41,255:19,0 chr2 220397197 . C . PASS END=220397197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 220397198 . A . PASS END=220397199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,690:0,54,255:18,0 chr2 220397605 . G . PASS END=220397661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,120,1800:0,123,255:40,0 chr2 220399893 . A . PASS END=220399893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 220399894 . C . PASS END=220399905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,543:0,42,255:19,0 chr2 220399906 . G . PASS END=220399906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,643:0,18,255:18,0 chr2 220399907 . G . PASS END=220399908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,714:0,57,255:19,0 chr2 220399909 . C . PASS END=220399910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220399911 . C . PASS END=220399911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 220399912 . T . PASS END=220399913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220399914 . A . PASS END=220399923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:24,0 chr2 220399924 . C . PASS END=220399924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,861:0,36,255:23,0 chr2 220399925 . T . PASS END=220399925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 220399926 . T . PASS END=220399928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220399929 . G . PASS END=220399933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:31:0,90,1350:0,93,255:31,0 chr2 220399934 . A . PASS END=220399934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1155:0,58,255:31,2 chr2 220399935 . C . PASS END=220399935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1072:0,30,255:31,2 chr2 220399936 . C . PASS END=220399936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1147:0,58,255:32,0 chr2 220399937 . C . PASS END=220399950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:32:0,90,1202:0,96,255:32,0 chr2 220399951 . A G, 50.00 PASS DP=35;MQ=248.87;MQRankSum=5.033;ReadPosRankSum=0.776;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,18,0:0.514,0.000:35:9,8,0:8,10,0:48:85,0,50,586,546,1132:255,0,255:15,0:5.0000e+01,6.5492e-05,5.2958e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,7,13,5:8,9,11,7 chr2 220399952 . C . PASS END=220399967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:85:34:0,85,1114:0,85,255:34,0 chr2 220399968 . T . PASS END=220399968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1133:0,69,255:32,0 chr2 220399969 . C . PASS END=220399988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:35:0,83,1217:0,83,255:37,0 chr2 220399989 . A . PASS END=220400015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1167:0,80,255:35,0 chr2 220400016 . G . PASS END=220400019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1125:0,80,255:30,0 chr2 220400020 . G . PASS END=220400020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1117:0,57,255:27,0 chr2 220400021 . T . PASS END=220400021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr2 220400022 . A . PASS END=220400032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 220400033 . G . PASS END=220400040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:29:0,60,900:0,70,255:23,0 chr2 220400041 . C . PASS END=220400041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:57:29:0,57,855:0,87,255:19,0 chr2 220400042 . A . PASS END=220400042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,917:0,32,255:17,0 chr2 220400043 . T . PASS END=220400044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:48:28:0,48,720:0,84,255:18,0 chr2 220400045 . C . PASS END=220400046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:39:26:0,39,585:0,78,255:13,0 chr2 220401788 . G . PASS END=220401788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220401789 . G . PASS END=220401813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,437:0,39,255:13,0 chr2 220401814 . T . PASS END=220401848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:18,0 chr2 220401849 . C . PASS END=220401849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:17,0 chr2 220401850 . G . PASS END=220401879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,690:0,54,255:19,0 chr2 220401964 . G . PASS END=220401967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 220401968 . C . PASS END=220401981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,484:0,45,255:15,0 chr2 220401982 . T . PASS END=220401983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220401984 . G . PASS END=220402020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr2 220402021 . A . PASS END=220402021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 220402022 . G . PASS END=220402033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr2 220402034 . C . PASS END=220402043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 220402354 . G . PASS END=220402358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220402359 . C . PASS END=220402359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:20,0 chr2 220402360 . T . PASS END=220402374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,739:0,63,255:21,0 chr2 220402375 . C . PASS END=220402376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220402377 . G . PASS END=220402388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr2 220402389 . T . PASS END=220402395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1072:0,84,255:30,0 chr2 220402396 . A . PASS END=220402396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:29,0 chr2 220402397 . C . PASS END=220402403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1133:0,90,255:30,0 chr2 220402404 . G . PASS END=220402404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 220402405 . C . PASS END=220402405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,1053:0,57,255:26,0 chr2 220402406 . G . PASS END=220402406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:26,0 chr2 220402407 . G . PASS END=220402430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,911:0,81,255:27,0 chr2 220402431 . T . PASS END=220402431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,915:0,64,255:26,0 chr2 220402432 . T . PASS END=220402435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 220402436 . G . PASS END=220402458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,967:0,65,255:26,0 chr2 220402655 . A . PASS END=220402664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:11,0 chr2 220402665 . C A, 50.00 PASS DP=11;MQ=250.00;MQRankSum=2.637;ReadPosRankSum=1.408;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,6,0:0.545,0.000:11:1,4,0:4,2,0:48:85,0,50,215,179,393:200,0,161:5,0:5.0000e+01,6.6269e-05,5.2803e+01,2.1451e+02,2.1357e+02,3.9630e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,3,2,4:4,1,4,2 chr2 220402666 . G . PASS END=220402682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,426:0,33,255:12,0 chr2 220402683 . A . PASS END=220402685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220402686 . G . PASS END=220402692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220402693 . G . PASS END=220402700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220402701 . G . PASS END=220402702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220402703 . C . PASS END=220402759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,335:0,30,255:11,0 chr2 220402760 . G . PASS END=220402768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 220404105 . T . PASS END=220404115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,776:0,63,255:22,0 chr2 220404116 . T . PASS END=220404116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 220404117 . G . PASS END=220404160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,842:0,61,255:26,0 chr2 220404161 . A . PASS END=220404161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,939:0,42,255:24,0 chr2 220404162 . G . PASS END=220404194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:26,0 chr2 220404195 . G . PASS END=220404195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:22,0 chr2 220404196 . T . PASS END=220404200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 220404201 . C . PASS END=220404201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:23,0 chr2 220404202 . A . PASS END=220404210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 220404211 . C . PASS END=220404211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:22,0 chr2 220404212 . T . PASS END=220404217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 220404218 . T . PASS END=220404218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:19,0 chr2 220404219 . C . PASS END=220404221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 220404222 . G . PASS END=220404246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,623:0,41,255:19,0 chr2 220404247 . T . PASS END=220404247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 220404248 . G . PASS END=220404252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,592:0,51,255:17,0 chr2 220404253 . A . PASS END=220404253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 220404254 . G . PASS END=220404258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:17,0 chr2 220404259 . G . PASS END=220404259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220404260 . G . PASS END=220404343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,560:0,45,255:19,0 chr2 220404344 . G . PASS END=220404353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,620:0,48,255:17,0 chr2 220404354 . T . PASS END=220404354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:14,0 chr2 220404355 . G . PASS END=220404360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 220404361 . A . PASS END=220404380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:13:0,39,451:0,39,255:13,0 chr2 220404381 . A G, 86.13 PASS DP=13;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,13,0:1.000,0.000:13:0,8,0:0,5,0:36:124,39,0,504,39,504:255,39,0:0,0:8.6127e+01,3.6127e+01,1.0596e-03,4.5000e+02,7.0897e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,6:0,0,4,9 chr2 220404382 . T . PASS END=220404409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,449:0,36,255:13,0 chr2 220404410 . T . PASS END=220404410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr2 220404411 . G . PASS END=220404418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,421:0,36,255:12,0 chr2 220404419 . G . PASS END=220404420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220404421 . C . PASS END=220404421 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:9,0 chr2 220404422 . G . PASS END=220404468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,398:0,33,255:12,0 chr2 220404469 . T . PASS END=220404469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 220404470 . G . PASS END=220404474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 220404475 . G . PASS END=220404476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 220404477 . G . PASS END=220404494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,495:0,36,255:13,0 chr2 220404495 . G . PASS END=220404498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,535:0,42,255:14,0 chr2 220404499 . T . PASS END=220404499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 220404500 . G . PASS END=220404531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,498:0,42,255:19,0 chr2 220404532 . G . PASS END=220404533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,743:0,60,255:20,0 chr2 220404534 . G . PASS END=220404538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220404539 . C . PASS END=220404585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,754:0,63,255:26,0 chr2 220404586 . G . PASS END=220404588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 220404589 . C . PASS END=220404598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:26,0 chr2 220404599 . G . PASS END=220404600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 220404601 . A . PASS END=220404601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 220404602 . A . PASS END=220404603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 220404604 . A . PASS END=220404604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:28,0 chr2 220404605 . G . PASS END=220404609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 220404610 . T . PASS END=220404610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 220404611 . C . PASS END=220404611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:28,0 chr2 220404612 . C . PASS END=220404613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1100:0,87,255:29,0 chr2 220404614 . G . PASS END=220404614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 220404615 . C . PASS END=220404616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 220404617 . G . PASS END=220404617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 220404618 . G . PASS END=220404620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1116:0,87,255:29,0 chr2 220404621 . C . PASS END=220404621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 220404622 . T . PASS END=220404622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220404623 . T . PASS END=220404623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,886:0,32,255:26,0 chr2 220404624 . C . PASS END=220404624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:57:29:0,57,1055:0,57,255:27,0 chr2 220404625 . T . PASS END=220404626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220404627 . G . PASS END=220404630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:29:0,66,990:0,71,255:26,0 chr2 220404631 . A . PASS END=220404631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,887:0,45,255:21,0 chr2 220404632 . G . PASS END=220404640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:66:27:0,66,990:0,68,255:25,0 chr2 220404641 . T . PASS END=220404641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:21,0 chr2 220404642 . G . PASS END=220404645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 220404646 . C . PASS END=220404646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,854:0,39,255:22,0 chr2 220404647 . G . PASS END=220404647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:23,0 chr2 220404648 . C T, 122.23 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,25,0:1.000,0.000:25:0,13,0:0,12,0:72:160,75,0,945,75,945:255,78,0:0,0:1.2223e+02,7.2234e+01,2.5886e-07,4.5000e+02,1.0700e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,16:0,0,11,14 chr2 220404649 . A . PASS END=220404667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:20:0,46,713:0,46,255:19,0 chr2 220404668 . T . PASS END=220404668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,739:0,30,255:18,0 chr2 220404669 . C . PASS END=220404685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,52,255:18,0 chr2 220404686 . G . PASS END=220404686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 220404687 . C . PASS END=220404699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:16:0,41,552:0,41,255:16,0 chr2 220404700 . G . PASS END=220404700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,455:0,12,255:13,0 chr2 220404701 . G . PASS END=220404715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:16,0 chr2 220404716 . G . PASS END=220404716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 220404717 . C . PASS END=220404717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220404718 . T . PASS END=220404718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:14,0 chr2 220404719 . C . PASS END=220404720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220404721 . G . PASS END=220404721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:13,0 chr2 220404722 . C . PASS END=220404725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 220404726 . G A, 95.16 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,8,0:0,8,0:45:133,48,0,620,48,620:255,51,0:0,0:9.5156e+01,4.5156e+01,1.3254e-04,4.5000e+02,7.9926e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,8:0,0,10,6 chr2 220404727 . T . PASS END=220404727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:12,0 chr2 220404728 . G . PASS END=220404739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:12,0 chr2 220404740 . G . PASS END=220404742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:11,0 chr2 220404743 . C . PASS END=220404746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 220404747 . G . PASS END=220404747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 220404748 . A . PASS END=220404748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:10,0 chr2 220404749 . C . PASS END=220404755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,405:0,36,255:12,0 chr2 220404756 . A . PASS END=220404756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 220404757 . T . PASS END=220404757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 220404758 . G . PASS END=220404763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220404764 . C . PASS END=220404779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 220404780 . C . PASS END=220404780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:11,0 chr2 220404781 . G . PASS END=220404783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220404784 . T . PASS END=220404784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:10,0 chr2 220404785 . C . PASS END=220404790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 220404791 . G . PASS END=220404791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,441:0,12,255:11,0 chr2 220404792 . T . PASS END=220404794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220404795 . C . PASS END=220404795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:13,0 chr2 220404796 . A . PASS END=220404796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 220404797 . G . PASS END=220404800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220404801 . G . PASS END=220404801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220404802 . G . PASS END=220404802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220404803 . T . PASS END=220404803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 220404804 . C . PASS END=220404809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 220404810 . T . PASS END=220404810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220404811 . G . PASS END=220404813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220404814 . G . PASS END=220404814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,504:0,14,255:13,0 chr2 220404815 . C . PASS END=220404819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:13:0,39,459:0,39,255:13,0 chr2 220404820 . T . PASS END=220404824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220404825 . A . PASS END=220404828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220404829 . T . PASS END=220404829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,449:0,25,255:12,0 chr2 220404830 . C . PASS END=220404832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220404833 . G . PASS END=220404884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:17,0 chr2 220404885 . C . PASS END=220404885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 220404886 . G . PASS END=220404888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 220404889 . G . PASS END=220404889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,698:0,21,255:18,0 chr2 220404890 . C . PASS END=220404896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,690:0,57,255:19,0 chr2 220404897 . C . PASS END=220404922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,753:0,60,255:25,0 chr2 220404923 . C . PASS END=220404936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1305:0,90,255:31,0 chr2 220404937 . A . PASS END=220404937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:28,0 chr2 220404938 . C . PASS END=220404945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 220404946 . A . PASS END=220404946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1072:0,79,255:29,0 chr2 220404947 . T . PASS END=220404951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220404952 . A . PASS END=220404952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 220404953 . C . PASS END=220404953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220404954 . G . PASS END=220404954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 220404955 . C . PASS END=220405002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1072:0,80,255:31,0 chr2 220405003 . C . PASS END=220405003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1163:0,58,255:30,0 chr2 220405004 . C . PASS END=220405060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1141:0,80,255:32,0 chr2 220405061 . C . PASS END=220405061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:27,0 chr2 220405062 . C . PASS END=220405078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 220405079 . A . PASS END=220405079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr2 220405080 . G . PASS END=220405080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220405081 . C . PASS END=220405081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 220405082 . C . PASS END=220405083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:28,0 chr2 220405084 . T . PASS END=220405084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1009:0,73,255:28,0 chr2 220405085 . T . PASS END=220405086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 220405087 . A . PASS END=220405087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:28,0 chr2 220405088 . C . PASS END=220405088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1054:0,52,255:28,0 chr2 220405089 . C . PASS END=220405099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1054:0,87,255:30,0 chr2 220405100 . T . PASS END=220405100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,964:0,73,255:29,0 chr2 220405101 . C . PASS END=220405128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1028:0,80,255:32,0 chr2 220405129 . C . PASS END=220405129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1074:0,60,255:31,0 chr2 220405130 . G . PASS END=220405131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:32:0,90,1350:0,96,255:31,0 chr2 220405132 . T . PASS END=220405132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:48:32:0,48,934:0,48,255:28,0 chr2 220405133 . T . PASS END=220405133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 220405134 . C . PASS END=220405134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:31:32:0,31,807:0,31,255:27,0 chr2 220405135 . A . PASS END=220405137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:32:0,82,955:0,82,255:32,0 chr2 220405138 . T . PASS END=220405138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:54:34:0,54,1021:0,54,255:28,0 chr2 220405139 . C . PASS END=220405139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:65:33:0,65,975:0,65,255:27,0 chr2 220405140 . C . PASS END=220405144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,806:0,84,255:31,0 chr2 220405145 . G . PASS END=220405145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1083:0,71,255:30,0 chr2 220405146 . A . PASS END=220405146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1031:0,52,255:28,0 chr2 220405147 . G . PASS END=220405148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:93:34:0,93,1395:0,101,255:31,0 chr2 220405149 . T . PASS END=220405149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1001:0,41,255:30,0 chr2 220405150 . G . PASS END=220405150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1064:0,66,255:29,0 chr2 220405151 . T . PASS END=220405151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 220405152 . C . PASS END=220405152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:36:34:0,36,978:0,36,255:28,0 chr2 220405153 . C . PASS END=220405153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1080:0,69,255:29,0 chr2 220405154 . C . PASS END=220405156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:31,0 chr2 220405157 . G . PASS END=220405157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,4:34:35:34:0,35,941:0,35,255:26,0 chr2 220405158 . A . PASS END=220405158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:46:34:0,46,1029:0,46,255:26,0 chr2 220405159 . A . PASS END=220405159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:87:35:0,87,1305:0,89,255:28,0 chr2 220405160 . C . PASS END=220405160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:39:35:0,39,1031:0,39,255:26,0 chr2 220405161 . A . PASS END=220405161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 220405162 . T . PASS END=220405162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,4:33:32:33:0,32,901:0,32,255:27,0 chr2 220405163 . C . PASS END=220405163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,3:33:49:33:0,49,950:0,49,255:27,0 chr2 220405164 . G . PASS END=220405164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1011:0,66,255:28,0 chr2 220405165 . G . PASS END=220405165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 220405166 . C . PASS END=220405166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1003:0,41,255:25,0 chr2 220405167 . C . PASS END=220405167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:27,0 chr2 220405168 . A . PASS END=220405168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1036:0,57,255:26,0 chr2 220405169 . C . PASS END=220405169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220405170 . A . PASS END=220405171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1008:0,60,255:26,0 chr2 220405172 . C . PASS END=220405172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,4:30:24:30:0,24,867:0,24,255:22,0 chr2 220405173 . A . PASS END=220405173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220405174 . G . PASS END=220405174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,986:0,46,255:25,0 chr2 220405175 . C . PASS END=220405176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:31:0,60,1039:0,60,255:27,0 chr2 220405177 . C . PASS END=220405179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 220405180 . T . PASS END=220405180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,73,255:23,0 chr2 220405181 . C . PASS END=220405181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,963:0,57,255:23,0 chr2 220405182 . A . PASS END=220405182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:24,0 chr2 220405183 . G . PASS END=220405183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:37:31:0,37,897:0,37,255:25,0 chr2 220405184 . C . PASS END=220405186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1186:0,83,255:28,0 chr2 220405187 . C . PASS END=220405192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1066:0,66,255:26,0 chr2 220405193 . G . PASS END=220405193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1218:0,86,255:30,0 chr2 220405194 . T . PASS END=220405194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1141:0,60,255:30,0 chr2 220405195 . G . PASS END=220405202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1148:0,83,255:30,0 chr2 220405203 . G . PASS END=220405203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 220405204 . G . PASS END=220405205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 220405206 . T . PASS END=220405206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1039:0,74,255:26,0 chr2 220405207 . G . PASS END=220405207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220405208 . A . PASS END=220405208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1023:0,51,255:26,0 chr2 220405209 . G . PASS END=220405209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220405210 . C . PASS END=220405211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220405212 . A . PASS END=220405212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1047:0,59,255:27,0 chr2 220405213 . T . PASS END=220405213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 220405214 . C . PASS END=220405214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,1000:0,35,255:26,0 chr2 220405215 . G . PASS END=220405215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:25,0 chr2 220405216 . G . PASS END=220405218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 220405219 . C . PASS END=220405220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:74:30:0,74,1070:0,74,255:28,0 chr2 220405221 . G . PASS END=220405222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1194:0,83,255:31,0 chr2 220405223 . A . PASS END=220405223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:31,0 chr2 220405224 . G . PASS END=220405229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1174:0,96,255:32,0 chr2 220405230 . G A, 145.86 PASS DP=33;MQ=247.98;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,33,0:1.000,0.000:33:0,15,0:0,18,0:96:184,99,0,1248,99,1248:255,99,0:0,0:1.4586e+02,9.5864e+01,0.0000e+00,4.5000e+02,1.3063e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,17,16:0,0,11,22 chr2 220405231 . T . PASS END=220405267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1150:0,83,255:36,0 chr2 220405268 . A . PASS END=220405283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:92:36:0,92,1204:0,92,255:36,0 chr2 220405284 . G . PASS END=220405320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,102,1442:0,107,255:40,0 chr2 220405321 . T C, 169.93 PASS DP=41;MQ=249.44;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,41,0:1.000,0.000:41:0,19,0:0,22,0:120:208,123,0,1548,123,1548:255,123,0:0,0:1.6993e+02,1.1993e+02,0.0000e+00,4.5000e+02,1.5470e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,23:0,0,14,27 chr2 220405322 . G . PASS END=220405358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1105:0,85,255:35,0 chr2 220405359 . C . PASS END=220405364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220405668 . C . PASS END=220405842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:87:35:0,87,1305:0,104,255:40,0 chr2 220405843 . A . PASS END=220405847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:72:33:0,72,1080:0,99,255:26,0 chr2 220406257 . C . PASS END=220406271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:68:0,120,1800:0,174,255:40,0 chr2 220406329 . T . PASS END=220406363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:90:43:0,90,1350:0,99,255:40,0 chr2 220406364 . C . PASS END=220406364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1551:0,77,255:29,0 chr2 220406365 . G . PASS END=220406378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:85:33:0,85,1227:0,85,255:31,0 chr2 220406379 . T . PASS END=220406379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1088:0,79,255:27,0 chr2 220406380 . G . PASS END=220406383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1109:0,80,255:27,0 chr2 220406384 . C . PASS END=220406384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 220406385 . G . PASS END=220406389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:31:0,81,1215:0,83,255:27,0 chr2 220406390 . A . PASS END=220406400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,990:0,65,255:26,0 chr2 220406401 . A . PASS END=220406402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:57:27:0,57,855:0,65,255:19,0 chr2 220406403 . G . PASS END=220406403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:20,0 chr2 220406404 . G . PASS END=220406406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:54:25:0,54,810:0,58,255:18,0 chr2 220406407 . C . PASS END=220406407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:17,0 chr2 220406408 . G . PASS END=220406408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 220406409 . C . PASS END=220406425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,723:0,63,255:21,0 chr2 220406426 . C . PASS END=220406427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:21,0 chr2 220406428 . G . PASS END=220406429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220406430 . A . PASS END=220406437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,792:0,52,255:19,0 chr2 220406438 . A . PASS END=220406438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,762:0,38,255:17,0 chr2 220406439 . G . PASS END=220406457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,582:0,48,255:18,0 chr2 220406458 . C . PASS END=220406458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:16,0 chr2 220406459 . A . PASS END=220406461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 220406462 . A . PASS END=220406462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 220406463 . G . PASS END=220406465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:18,0 chr2 220406466 . T . PASS END=220406466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:16,0 chr2 220406467 . G . PASS END=220406494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:43:18:0,43,668:0,43,255:19,0 chr2 220406495 . T . PASS END=220406506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 220406507 . C . PASS END=220406509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220406510 . G . PASS END=220406518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 220406519 . T . PASS END=220406519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:22,0 chr2 220406520 . C . PASS END=220406540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:23,0 chr2 220406541 . G . PASS END=220406541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 220406542 . C . PASS END=220406547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:22:0,63,762:0,66,255:23,0 chr2 220406548 . C . PASS END=220406548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,792:0,55,255:21,0 chr2 220406549 . A . PASS END=220406555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,72,255:26,0 chr2 220406556 . G . PASS END=220406560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1047:0,81,255:27,0 chr2 220406561 . G . PASS END=220406563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220406564 . G . PASS END=220406565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220406566 . G . PASS END=220406601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:68:25:0,68,961:0,68,255:26,0 chr2 220406602 . G . PASS END=220406603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220406604 . C . PASS END=220406614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:26,0 chr2 220406615 . G . PASS END=220406684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:89:35:0,89,1257:0,89,255:40,0 chr2 220406685 . G . PASS END=220406721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:43:0,111,1588:0,113,255:40,0 chr2 220406722 . T C, 46.50 PASS DP=50;MQ=250.00;MQRankSum=5.931;ReadPosRankSum=2.763;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,20,0:0.400,0.000:50:17,15,0:13,5,0:46:81,0,50,715,1065,1780:255,0,255:28,0:4.6504e+01,1.1882e-04,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,15,5:17,13,16,4 chr2 220406723 . A . PASS END=220406759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:46:0,111,1665:0,125,255:40,0 chr2 220406760 . C . PASS END=220406825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1215:0,89,255:40,0 chr2 220406826 . C . PASS END=220406827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 220406828 . A . PASS END=220406833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:27,0 chr2 220406834 . G . PASS END=220406855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,65,255:26,0 chr2 220406856 . G . PASS END=220406856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:21,0 chr2 220406857 . C . PASS END=220406861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,823:0,66,255:23,0 chr2 220406862 . C . PASS END=220406862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 220406863 . C . PASS END=220406881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,839:0,66,255:23,0 chr2 220406882 . A . PASS END=220406894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:16:0,42,630:0,48,255:16,0 chr2 220406895 . T . PASS END=220406906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 220406907 . G . PASS END=220406910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 220406911 . C . PASS END=220406911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 220407947 . C . PASS END=220407949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 220407950 . A . PASS END=220407950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 220407951 . C . PASS END=220407955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 220407956 . T . PASS END=220407956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,415:0,28,255:14,0 chr2 220407957 . T . PASS END=220407967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,504:0,42,255:15,0 chr2 220407968 . T . PASS END=220407968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 220407969 . G . PASS END=220407974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,566:0,48,255:18,0 chr2 220407975 . G . PASS END=220407975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 220407976 . C . PASS END=220407977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 220407978 . G . PASS END=220407981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 220407982 . A . PASS END=220407982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 220407983 . G . PASS END=220407995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 220407996 . A . PASS END=220407996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 220407997 . G . PASS END=220408005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,792:0,66,255:22,0 chr2 220408006 . C . PASS END=220408006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,804:0,53,255:21,0 chr2 220408007 . T . PASS END=220408012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220408013 . T . PASS END=220408013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 220408014 . T . PASS END=220408016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,784:0,66,255:22,0 chr2 220408017 . C . PASS END=220408017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 220408018 . C . PASS END=220408022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:23,0 chr2 220408023 . C . PASS END=220408023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 220408024 . G . PASS END=220408036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,817:0,69,255:23,0 chr2 220408037 . C . PASS END=220408037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 220408038 . C . PASS END=220408051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,715:0,63,255:22,0 chr2 220408052 . T . PASS END=220408052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:19,0 chr2 220408053 . C . PASS END=220408058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:22,0 chr2 220408059 . C . PASS END=220408059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:19,0 chr2 220408060 . G . PASS END=220408083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,878:0,65,255:24,0 chr2 220408084 . C . PASS END=220408084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 220408085 . G . PASS END=220408087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:24,0 chr2 220408088 . G . PASS END=220408088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 220408089 . C . PASS END=220408093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 220408094 . G . PASS END=220408100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,940:0,81,255:27,0 chr2 220408101 . C . PASS END=220408101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 220408102 . G . PASS END=220408102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 220408103 . C . PASS END=220408103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,931:0,64,255:26,0 chr2 220408104 . G . PASS END=220408110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 220408111 . C . PASS END=220408111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 220408112 . A . PASS END=220408115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 220408116 . C . PASS END=220408117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:28,0 chr2 220408118 . G . PASS END=220408118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:38:31:0,38,1016:0,38,255:24,0 chr2 220408119 . A . PASS END=220408119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:25,0 chr2 220408120 . G . PASS END=220408121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:30:0,75,1041:0,76,255:25,0 chr2 220408122 . C . PASS END=220408213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1169:0,80,255:40,0 chr2 220408214 . A . PASS END=220408229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,71,255:25,0 chr2 220408230 . G . PASS END=220408230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:20,0 chr2 220408231 . C . PASS END=220408242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:20,0 chr2 220408243 . C . PASS END=220408243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 220408244 . A . PASS END=220408245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220408246 . C . PASS END=220408246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 220408247 . A . PASS END=220408247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,678:0,32,255:19,0 chr2 220408248 . G . PASS END=220408251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220408252 . T . PASS END=220408260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:18,0 chr2 220408809 . A . PASS END=220408822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,388:0,33,255:13,0 chr2 220408823 . C . PASS END=220408828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220408829 . C . PASS END=220408829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 220408830 . G . PASS END=220408832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 220408833 . C . PASS END=220408836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220408837 . G . PASS END=220408838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220408839 . C . PASS END=220408839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220408840 . C . PASS END=220408841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220408842 . G . PASS END=220408845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 220408846 . C . PASS END=220408850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220408851 . G . PASS END=220408852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220408853 . C . PASS END=220408853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220408854 . T . PASS END=220408855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220408856 . C . PASS END=220408861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 220408862 . C . PASS END=220408862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220408863 . C . PASS END=220408866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:20:0,46,714:0,46,255:19,0 chr2 220408867 . G . PASS END=220408868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220408869 . C . PASS END=220408872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220408873 . G . PASS END=220408901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,806:0,63,255:22,0 chr2 220408902 . A . PASS END=220408912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:20:0,54,810:0,60,255:19,0 chr2 220408913 . G . PASS END=220408932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 220408933 . C . PASS END=220408933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 220408934 . C . PASS END=220408934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 220408935 . G . PASS END=220408948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,720:0,44,255:19,0 chr2 220408949 . A . PASS END=220408949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr2 220408950 . C . PASS END=220408952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,810:0,57,255:18,0 chr2 220408953 . T . PASS END=220408953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,592:0,26,255:18,0 chr2 220408954 . T . PASS END=220408956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,615:0,57,255:19,0 chr2 220408957 . C . PASS END=220408959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,751:0,60,255:20,0 chr2 220408960 . C . PASS END=220408974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 220408975 . C . PASS END=220408986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 220408987 . A . PASS END=220409003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,47,255:18,0 chr2 220409004 . C . PASS END=220409004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr2 220409005 . C . PASS END=220409005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220409006 . C . PASS END=220409027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:13:0,36,496:0,39,255:13,0 chr2 220409028 . C . PASS END=220409028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:11,0 chr2 220409029 . C . PASS END=220409054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,427:0,36,255:12,0 chr2 220409055 . T . PASS END=220409062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:11:0,27,405:0,33,255:9,0 chr2 220409063 . C . PASS END=220409075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,380:0,30,255:10,0 chr2 220409076 . A . PASS END=220409077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220409078 . G . PASS END=220409086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220409087 . G . PASS END=220409087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220409088 . C . PASS END=220409089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220409090 . T . PASS END=220409090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 220409091 . C . PASS END=220409098 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,343:0,30,255:10,0 chr2 220409099 . G . PASS END=220409099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 220409450 . A . PASS END=220409456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:21,0 chr2 220409457 . G . PASS END=220409457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,798:0,53,255:21,0 chr2 220409458 . G . PASS END=220409462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220409463 . T . PASS END=220409463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 220409464 . G . PASS END=220409471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,762:0,66,255:22,0 chr2 220409472 . T . PASS END=220409472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 220409473 . G . PASS END=220409474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,815:0,66,255:22,0 chr2 220409475 . G . PASS END=220409475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 220409476 . G . PASS END=220409476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220409477 . T . PASS END=220409477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,799:0,55,255:22,0 chr2 220409478 . T . PASS END=220409486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,930:0,72,255:24,0 chr2 220409487 . T . PASS END=220409487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 220409488 . G . PASS END=220409489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220409490 . C . PASS END=220409490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:23,0 chr2 220409491 . C . PASS END=220409504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,953:0,65,255:25,0 chr2 220409505 . A . PASS END=220409506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:23,0 chr2 220409507 . G . PASS END=220409507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220409508 . C . PASS END=220409508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 220409509 . C . PASS END=220409517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 220409518 . T . PASS END=220409518 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:22,0 chr2 220409519 . G . PASS END=220409524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 220409525 . T . PASS END=220409525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:22,0 chr2 220409526 . G . PASS END=220409526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220409527 . T . PASS END=220409527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 220409528 . G . PASS END=220409532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,906:0,72,255:24,0 chr2 220409533 . G . PASS END=220409533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:23,0 chr2 220409534 . C . PASS END=220409537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220409538 . T . PASS END=220409538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 220409539 . G . PASS END=220409571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 220409572 . C . PASS END=220409590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,546:0,40,255:18,0 chr2 220409591 . T . PASS END=220409591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,566:0,18,255:17,0 chr2 220409592 . T . PASS END=220409594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,635:0,40,255:17,0 chr2 220409595 . G . PASS END=220409595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 220409596 . A . PASS END=220409598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 220409599 . C . PASS END=220409599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 220409600 . G . PASS END=220409601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,596:0,37,255:14,0 chr2 220409602 . C . PASS END=220409602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 220409603 . T . PASS END=220409603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 220409604 . A . PASS END=220409604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:14,0 chr2 220409605 . C . PASS END=220409605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 220409606 . T . PASS END=220409607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:14,0 chr2 220409608 . C . PASS END=220409612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,496:0,42,255:14,0 chr2 220409613 . T . PASS END=220409615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220412228 . G . PASS END=220412231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,578:0,54,255:18,0 chr2 220412232 . C . PASS END=220412232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 220412233 . C . PASS END=220412233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 220412234 . G . PASS END=220412234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 220412235 . C . PASS END=220412250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,652:0,41,255:19,0 chr2 220412251 . C . PASS END=220412251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,560:0,37,255:16,0 chr2 220412252 . T . PASS END=220412255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 220412256 . T C, 100.71 PASS DP=18;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,12,0:0,6,0:51:138,54,0,669,54,669:255,57,0:0,0:1.0071e+02,5.0712e+01,3.6758e-05,4.5000e+02,8.5482e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,9:0,0,13,5 chr2 220412257 . C . PASS END=220412258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,659:0,41,255:19,0 chr2 220412259 . C . PASS END=220412261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:21,0 chr2 220412262 . T . PASS END=220412263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr2 220412264 . G . PASS END=220412266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220412267 . T . PASS END=220412268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 220412269 . C . PASS END=220412269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220412270 . T . PASS END=220412270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,707:0,49,255:20,0 chr2 220412271 . G . PASS END=220412271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220412272 . T . PASS END=220412273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 220412274 . T . PASS END=220412276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220412277 . C . PASS END=220412283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,790:0,50,255:19,0 chr2 220412284 . G . PASS END=220412284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220412285 . T . PASS END=220412285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220412286 . C . PASS END=220412287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 220412288 . T . PASS END=220412288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:20,0 chr2 220412289 . C . PASS END=220412293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220412294 . T . PASS END=220412301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 220412302 . T . PASS END=220412302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:19,0 chr2 220412303 . A . PASS END=220412307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220412308 . G . PASS END=220412315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220412316 . G . PASS END=220412342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,829:0,66,255:26,0 chr2 220412343 . G . PASS END=220412347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 220412348 . C . PASS END=220412360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:27:0,62,1035:0,62,255:26,0 chr2 220412361 . G . PASS END=220412364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1215:0,90,255:29,0 chr2 220412365 . A . PASS END=220412365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 220412366 . T . PASS END=220412366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220412367 . C . PASS END=220412367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:28,0 chr2 220412368 . G . PASS END=220412510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:30:0,81,1157:0,90,255:34,0 chr2 220412511 . G . PASS END=220412514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:78:33:0,78,1170:0,99,255:26,0 chr2 220412515 . C . PASS END=220412517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220412518 . T . PASS END=220412519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220412520 . G . PASS END=220412668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1215:0,84,255:35,0 chr2 220412669 . A . PASS END=220412672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:30:0,72,1080:0,90,255:25,0 chr2 220412673 . A . PASS END=220412675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:27,0 chr2 220412676 . C . PASS END=220412676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:32:0,78,1170:0,96,255:26,0 chr2 220412677 . C . PASS END=220412682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:27,0 chr2 220412683 . G . PASS END=220412757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,886:0,72,255:26,0 chr2 220412758 . C . PASS END=220412758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,799:0,41,255:19,0 chr2 220412759 . T . PASS END=220412761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220412762 . T . PASS END=220412763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 220412764 . C . PASS END=220412764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:22:24:0,22,712:0,22,255:16,0 chr2 220412765 . A . PASS END=220412765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,792:0,52,255:18,0 chr2 220412766 . G . PASS END=220412776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,656:0,60,255:20,0 chr2 220412777 . C . PASS END=220412779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,698:0,44,255:19,0 chr2 220412780 . C . PASS END=220412780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220412781 . T . PASS END=220412781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 220412782 . G . PASS END=220412786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220412787 . G . PASS END=220412803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:41:19:0,41,681:0,41,255:19,0 chr2 220413874 . T . PASS END=220413917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:19,0 chr2 220413918 . C . PASS END=220413918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 220413919 . G . PASS END=220413935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,637:0,54,255:18,0 chr2 220413936 . A . PASS END=220413936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 220413937 . A . PASS END=220413946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:18:0,51,765:0,54,255:19,0 chr2 220413947 . G . PASS END=220413974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,776:0,63,255:24,0 chr2 220413975 . C . PASS END=220414015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:26,0 chr2 220414016 . C T, 117.47 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,25,0:1.000,0.000:25:0,12,0:0,13,0:67:155,70,0,255,255,255:255,75,0:0,0:1.1747e+02,6.7469e+01,7.7658e-07,2.5224e+02,2.8701e+02,2.5525e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,11:0,0,11,14:220414016 chr2 220414017 . C . PASS END=220414018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 220414019 . T C, 117.14 PASS DP=25;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,25,0:1.000,0.000:25:0,12,0:0,13,0:67:155,70,0,255,255,255:255,75,0:0,0:1.1714e+02,6.7140e+01,7.7658e-07,2.5191e+02,2.8668e+02,2.5492e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,11:0,0,11,14:220414016 chr2 220414020 . G . PASS END=220414049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,854:0,72,255:25,0 chr2 220414050 . C . PASS END=220414051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 220414052 . C . PASS END=220414059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220414060 . G . PASS END=220414060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220414061 . A . PASS END=220414061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220414062 . G . PASS END=220414062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 220414063 . A . PASS END=220414066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220414067 . C . PASS END=220414076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:67:28:0,67,947:0,67,255:26,0 chr2 220414170 . C . PASS END=220414205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1063:0,93,255:32,0 chr2 220414206 . G . PASS END=220414206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1106:0,63,255:26,0 chr2 220414207 . C . PASS END=220414218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1033:0,84,255:28,0 chr2 220414219 . T . PASS END=220414224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 220414225 . A . PASS END=220414239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:20:0,54,810:0,60,255:19,0 chr2 220414240 . C . PASS END=220414243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 220414439 . A . PASS END=220414439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 220414440 . G . PASS END=220414454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 220414455 . T . PASS END=220414455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 220414456 . C . PASS END=220414460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220414461 . A . PASS END=220414461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,875:0,70,255:26,0 chr2 220414462 . C . PASS END=220414481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1111:0,87,255:30,0 chr2 220414482 . T . PASS END=220414482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 220414483 . G . PASS END=220414545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:30:0,83,1117:0,83,255:34,0 chr2 220414546 . A . PASS END=220414546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:32:0,75,1125:0,96,255:25,0 chr2 220414547 . G . PASS END=220414555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 220414556 . G . PASS END=220414556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 220414557 . G . PASS END=220414557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:24,0 chr2 220414558 . C . PASS END=220414576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,65,255:26,0 chr2 220415454 . C . PASS END=220415454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 220415547 . T . PASS END=220415549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:30,0 chr2 220415550 . G . PASS END=220415563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,900:0,88,255:24,0 chr2 220415564 . C . PASS END=220415573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:42:32:0,42,630:0,57,255:18,0 chr2 220415574 . A . PASS END=220415577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:30:30:0,30,450:0,52,255:10,0 chr2 220415578 . A . PASS END=220415579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:27:32:0,27,405:0,57,255:9,0 chr2 220415580 . T . PASS END=220415584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:15:32:0,15,225:0,41,255:6,0 chr2 220415585 . A . LowGQ END=220415590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:29,1:30:0:29:0,0,0:0,48,255:2,0 chr2 220415964 . T . PASS END=220416007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,147,255:40,0 chr2 220416243 . T . PASS END=220416251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,869:0,69,255:25,0 chr2 220416252 . C . PASS END=220416252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 220416253 . T . PASS END=220416260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220416261 . C . PASS END=220416264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:28,0 chr2 220416265 . C . PASS END=220416265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220416266 . G . PASS END=220416271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220416272 . G . PASS END=220416273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220416274 . G . PASS END=220416275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 220416276 . G . PASS END=220416276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220416277 . C . PASS END=220416283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 220416284 . G . PASS END=220416284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 220416285 . G . PASS END=220416295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 220416296 . A . PASS END=220416312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:74:26:0,74,962:0,74,255:26,0 chr2 220416313 . T . PASS END=220416314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 220416315 . C . PASS END=220416344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,72,255:26,0 chr2 220416345 . G . PASS END=220416351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr2 220416352 . G . PASS END=220416357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 220416358 . T . PASS END=220416378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:18:0,43,645:0,43,255:19,0 chr2 220416379 . T . PASS END=220416379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 220416380 . C . PASS END=220416381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 220416382 . C . PASS END=220416413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:12:0,30,450:0,36,255:13,0 chr2 220416414 . G . PASS END=220416416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220416417 . C . PASS END=220416429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,380:0,30,255:10,0 chr2 220416430 . G . PASS END=220416434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220416435 . G . PASS END=220416437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:11,0 chr2 220416438 . C . PASS END=220416438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:10,0 chr2 220416439 . A . PASS END=220416441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:11,0 chr2 220416442 . G . PASS END=220416442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,363:0,17,255:10,0 chr2 220416443 . T . PASS END=220416446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220416447 . C . PASS END=220416447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 220416448 . T . PASS END=220416450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220416451 . A . LowGQ END=220416451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,341:6,0,255:8,0 chr2 220416452 . G . PASS END=220416456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 220416457 . G . PASS END=220416464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:10,0 chr2 220416465 . G . LowGQ END=220416465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:9,0 chr2 220416466 . C . PASS END=220416469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220416470 . C . PASS END=220416470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,310:0,13,255:9,0 chr2 220416471 . C . PASS END=220416476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,299:0,30,255:10,0 chr2 220416477 . G . LowGQ END=220416477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,2:10:0:10:0,0,255:3,0,255:8,0 chr2 220416478 . G . PASS END=220416481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,364:0,30,255:10,0 chr2 220416482 . T . LowGQ END=220416482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,221:9,0,230:9,0 chr2 220416483 . C . PASS END=220416483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 220416484 . T . PASS END=220416484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 220416485 . C . PASS END=220416488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,327:0,30,255:10,0 chr2 220416489 . A . PASS END=220416489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,324:0,14,255:9,0 chr2 220416490 . G . PASS END=220416492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220416493 . G . PASS END=220416493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 220416494 . G . PASS END=220416496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 220416497 . G . PASS END=220416505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220416506 . T . LowGQ END=220416506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,310:9,0,255:8,0 chr2 220416507 . C . PASS END=220416520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:9:0,21,315:0,27,255:9,0 chr2 220416834 . C . PASS END=220416840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:26,0 chr2 220416841 . T . PASS END=220416844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:68:26:0,68,933:0,68,255:26,0 chr2 220416845 . A . PASS END=220416846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220416847 . T . PASS END=220416850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:26,0 chr2 220416851 . G . PASS END=220416904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1063:0,83,255:33,0 chr2 220416905 . C . PASS END=220416915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:31:0,87,1210:0,93,255:32,0 chr2 220416916 . A . PASS END=220416916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1125:0,57,255:29,0 chr2 220416917 . A . PASS END=220416938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1208:0,83,255:32,0 chr2 220417258 . C . PASS END=220417265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:15:0,45,574:0,45,255:18,0 chr2 220417266 . C T, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,9,0:0,10,0:54:142,57,0,737,57,737:255,57,0:0,0:1.0418e+02,5.4185e+01,1.6567e-05,4.5000e+02,8.8955e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,8:0,0,9,10 chr2 220417267 . G . PASS END=220417271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 220417272 . C . PASS END=220417272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 220417273 . G . PASS END=220417283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,676:0,44,255:19,0 chr2 220417284 . C . PASS END=220417288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,792:0,63,255:21,0 chr2 220417289 . T . PASS END=220417289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:20,0 chr2 220417290 . C . PASS END=220417290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 220417291 . T . PASS END=220417291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:19,0 chr2 220417292 . C . PASS END=220417298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220417299 . C . PASS END=220417300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 220417301 . G . PASS END=220417303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 220417304 . T . PASS END=220417312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,845:0,66,255:22,0 chr2 220417313 . C . PASS END=220417313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 220417314 . C . PASS END=220417340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,825:0,66,255:23,0 chr2 220417341 . A . PASS END=220417362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:48:19:0,48,720:0,49,255:19,0 chr2 220417363 . C . PASS END=220417363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 220417364 . G . PASS END=220417370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:16:0,48,612:0,48,255:16,0 chr2 220417371 . T . PASS END=220417371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:15,0 chr2 220417372 . C . PASS END=220417373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 220417374 . C . PASS END=220417374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 220417375 . G . PASS END=220417380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,620:0,48,255:16,0 chr2 220417381 . T . PASS END=220417381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,382:0,15,255:12,0 chr2 220417382 . C . PASS END=220417391 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 220417392 . A . PASS END=220417392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:15,0 chr2 220417393 . G . PASS END=220417399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr2 220417400 . G . PASS END=220417408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220417409 . C . PASS END=220417409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 220417410 . A . PASS END=220417414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,527:0,42,255:14,0 chr2 220417415 . A . PASS END=220417419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:12,0 chr2 220417590 . C . PASS END=220417595 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220417596 . C . PASS END=220417601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,388:0,30,255:12,0 chr2 220417602 . G . PASS END=220417602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 220417603 . G . PASS END=220417606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,421:0,36,255:12,0 chr2 220417607 . A . PASS END=220417607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:11,0 chr2 220417608 . C . PASS END=220417619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 220417620 . G . PASS END=220417620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 220417621 . G . PASS END=220417622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220417623 . C . LowGQ END=220417623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,441:10,0,255:13,0 chr2 220417624 . C . PASS END=220417630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 220417631 . A . PASS END=220417631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220417632 . C . PASS END=220417648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,660:0,48,255:18,0 chr2 220417649 . C . PASS END=220417649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 220417650 . C . PASS END=220417676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,662:0,41,255:19,0 chr2 220417677 . G . PASS END=220417683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr2 220417684 . A . PASS END=220417684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,690:0,46,255:20,0 chr2 220417685 . A . PASS END=220417692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,782:0,63,255:21,0 chr2 220417693 . C . PASS END=220417693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 220417694 . G . PASS END=220417694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220417695 . T . PASS END=220417695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,759:0,47,255:19,0 chr2 220417696 . G . PASS END=220417697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220417698 . C . PASS END=220417717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,675:0,44,255:18,0 chr2 220417718 . C . PASS END=220417725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:12,0 chr2 220417726 . A . PASS END=220417728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:27:15:0,27,405:0,45,255:9,0 chr2 220417729 . C . PASS END=220417735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:11,0 chr2 220417736 . G . PASS END=220417739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 220417740 . T . PASS END=220417740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 220417741 . C . PASS END=220417744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220417745 . T . PASS END=220417745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,380:0,19,255:8,0 chr2 220417746 . C . PASS END=220417746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:27:12:0,27,405:0,36,255:9,0 chr2 220418296 . C . PASS END=220418404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:87:35:0,87,1395:0,87,255:40,0 chr2 220418405 . A . PASS END=220418405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 220418406 . C . PASS END=220418408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 220418423 . G . PASS END=220418423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:22,0 chr2 220419196 . C . PASS END=220419197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 220419198 . C . PASS END=220419198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220419199 . T . PASS END=220419200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220419201 . A . PASS END=220419201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:13,0 chr2 220419202 . C . PASS END=220419203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220419204 . A . PASS END=220419204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 220419205 . T . PASS END=220419215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:18,0 chr2 220419216 . G . PASS END=220419216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 220419217 . C . PASS END=220419220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220419221 . G . PASS END=220419235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,847:0,69,255:24,0 chr2 220419236 . T C, 116.22 PASS DP=24;MQ=250.00;FractionInformativeReads=0.958 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,15,0:0,8,0:66:154,69,0,884,69,884:255,72,0:0,0:1.1622e+02,6.6221e+01,1.0354e-06,4.5000e+02,1.0099e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,9:0,0,14,9 chr2 220419237 . G . PASS END=220419241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,939:0,75,255:26,0 chr2 220419242 . G . PASS END=220419273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,984:0,81,255:30,0 chr2 220419274 . C . PASS END=220419301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:30:0,87,1096:0,90,255:31,0 chr2 220419302 . G . PASS END=220419311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:31,0 chr2 220419312 . A . PASS END=220419338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1063:0,74,255:26,0 chr2 220419339 . T C, 131.27 PASS DP=28;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,28,0:1.000,0.000:28:0,17,0:0,11,0:81:169,84,0,1085,84,1085:255,84,0:0,0:1.3127e+02,8.1272e+01,0.0000e+00,4.5000e+02,1.1604e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,12,16:0,0,13,15 chr2 220419340 . G . PASS END=220419356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,945:0,66,255:25,0 chr2 220419357 . C . PASS END=220419357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220419358 . A . PASS END=220419365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220419366 . G . PASS END=220419376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 220419377 . C . PASS END=220419387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:17,0 chr2 220419388 . C . PASS END=220419408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,496:0,39,255:13,0 chr2 220419409 . C . PASS END=220419409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 220419410 . C . PASS END=220419411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 220419412 . C . PASS END=220419412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 220419413 . C . PASS END=220419452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 220419453 . A . PASS END=220419462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:9,0 chr2 220419468 . C . PASS END=220419468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 220420719 . T . PASS END=220420730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:15:0,45,535:0,45,255:16,0 chr2 220420731 . G . PASS END=220420731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:15,0 chr2 220420732 . G . PASS END=220420747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,562:0,51,255:18,0 chr2 220420748 . C . PASS END=220420779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,668:0,54,255:19,0 chr2 220420780 . C . PASS END=220420783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 220420784 . C . PASS END=220420784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220420785 . G A, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.723;ReadPosRankSum=3.039;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,11,0:0.550,0.000:20:3,6,0:6,5,0:48:85,0,50,393,314,707:255,0,255:8,0:5.0000e+01,6.7563e-05,5.2566e+01,3.9335e+02,3.4860e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,6,5:4,5,9,2 chr2 220420786 . C . PASS END=220420787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 220420788 . G . PASS END=220420807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,776:0,63,255:21,0 chr2 220420808 . C . PASS END=220420808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220420809 . C . PASS END=220420813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220420814 . T . PASS END=220420814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220420815 . G . PASS END=220420815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220420816 . A . PASS END=220420816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:19,0 chr2 220420817 . C . PASS END=220420821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:20,0 chr2 220420822 . T . PASS END=220420822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220420823 . G . PASS END=220420835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220420836 . G . PASS END=220420847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,690:0,44,255:19,0 chr2 220420848 . A . PASS END=220420900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,755:0,63,255:26,0 chr2 220420901 . C . PASS END=220420901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220420902 . C . PASS END=220420904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 220420905 . G . PASS END=220420918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:30,0 chr2 220420919 . C . PASS END=220420928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 220420929 . T . PASS END=220420929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:27,0 chr2 220420930 . C . PASS END=220420943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 220420944 . T . PASS END=220420944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,970:0,70,255:28,0 chr2 220420945 . T . PASS END=220420949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1072:0,87,255:29,0 chr2 220420950 . A . PASS END=220420950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr2 220420951 . C . PASS END=220420953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 220420954 . A . PASS END=220420954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1039:0,49,255:26,0 chr2 220420955 . C . PASS END=220420955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220420956 . A G, 133.34 PASS DP=29;MQ=249.66;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,29,0:1.000,0.000:29:0,12,0:0,17,0:83:171,86,0,271,271,271:255,90,0:0,0:1.3334e+02,8.3338e+01,0.0000e+00,2.6811e+02,3.0288e+02,2.7112e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,14,15:0,0,15,14 chr2 220420957 . T . PASS END=220420959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220420960 . T . PASS END=220420960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:25,0 chr2 220420961 . G . PASS END=220420964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220420965 . T . PASS END=220420965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,939:0,45,255:26,0 chr2 220420966 . T . PASS END=220420970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:29,0 chr2 220420971 . T . PASS END=220420971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1008:0,71,255:28,0 chr2 220420972 . G . PASS END=220420985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1080:0,87,255:29,0 chr2 220420986 . C . PASS END=220420986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1024:0,56,255:26,0 chr2 220420987 . A . PASS END=220420987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220420988 . A . PASS END=220420993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1002:0,68,255:25,0 chr2 220420994 . G . PASS END=220421014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,908:0,72,255:25,0 chr2 220421176 . C . PASS END=220421185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1133:0,90,255:30,0 chr2 220421186 . G . PASS END=220421186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 220421187 . A . PASS END=220421252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1155:0,80,255:34,0 chr2 220421253 . C . PASS END=220421253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:32,0 chr2 220421254 . C . PASS END=220421313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:81:29:0,81,1100:0,86,255:37,0 chr2 220421314 . T . PASS END=220421314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,972:0,70,255:28,0 chr2 220421315 . G . PASS END=220421357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1097:0,82,255:34,0 chr2 220421358 . G . PASS END=220421358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:69:33:0,69,1202:0,69,255:27,0 chr2 220421359 . G . PASS END=220421363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 220421364 . A . PASS END=220421365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,971:0,73,255:27,0 chr2 220421366 . T . PASS END=220421377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 220421378 . C . PASS END=220421379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220421380 . T . PASS END=220421381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220421382 . G . PASS END=220421382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:25,0 chr2 220421383 . C . PASS END=220421383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220421384 . A . PASS END=220421389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 220421390 . G . PASS END=220421416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 220421417 . C G, 50.00 PASS DP=27;MQ=249.57;MQRankSum=3.761;ReadPosRankSum=3.130;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,14,0:0.519,0.000:27:7,4,0:6,10,0:48:85,0,50,464,457,921:255,0,255:13,0:5.0000e+01,6.5492e-05,5.2952e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,9,5,9:8,5,7,7 chr2 220421418 . T . PASS END=220421435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr2 220421436 . A . PASS END=220421436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 220421437 . G . PASS END=220421445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 220422065 . C . PASS END=220422085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr2 220422086 . T . PASS END=220422086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 220422087 . G . PASS END=220422111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,396:0,33,255:13,0 chr2 220422112 . A . PASS END=220422112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 220422113 . G . PASS END=220422118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 220422119 . C . PASS END=220422156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:14:0,41,504:0,41,255:19,0 chr2 220422157 . A . PASS END=220422165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:19,0 chr2 220422166 . G . PASS END=220422172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 220422173 . C . PASS END=220422174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220422175 . T . PASS END=220422180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220422181 . A . PASS END=220422193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,759:0,47,255:19,0 chr2 220422194 . C T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.230;ReadPosRankSum=1.920;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,15,0:0.750,0.000:20:4,7,0:1,8,0:42:85,0,39,471,179,650:255,0,134:5,0:5.0000e+01,3.0262e-04,4.2243e+01,4.5000e+02,2.1358e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,8,7:4,1,10,5 chr2 220422195 . C . PASS END=220422217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:18:0,48,720:0,54,255:19,0 chr2 220422218 . C . PASS END=220422218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 220422219 . C . PASS END=220422231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:40:17:0,40,637:0,40,255:17,0 chr2 220422232 . A . PASS END=220422243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:16,0 chr2 220422244 . G . PASS END=220422244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 220422245 . G . PASS END=220422250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 220422251 . A . PASS END=220422252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 220422253 . A . PASS END=220422253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:15,0 chr2 220422254 . G . PASS END=220422254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,580:0,35,255:15,0 chr2 220422255 . G . PASS END=220422264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,653:0,54,255:18,0 chr2 220422265 . A . PASS END=220422276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:15:0,34,540:0,34,255:13,0 chr2 220422277 . C . PASS END=220422277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220422278 . C . PASS END=220422278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220422279 . G . PASS END=220422279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:12,0 chr2 220422280 . C . PASS END=220422288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 220422289 . C . PASS END=220422298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220422299 . T . PASS END=220422300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:26:14:0,26,488:0,26,255:14,0 chr2 220422301 . G . PASS END=220422311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 220422312 . C . PASS END=220422321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220422322 . A . PASS END=220422322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 220422323 . C . PASS END=220422340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,450:0,36,255:12,0 chr2 220422545 . C . PASS END=220422576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,288:0,24,255:9,0 chr2 220422577 . G . PASS END=220422601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:11,0 chr2 220422602 . A . PASS END=220422603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:24:11:0,24,360:0,33,255:8,0 chr2 220422604 . G . PASS END=220422606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 220422607 . T . PASS END=220422607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 220422608 . A . PASS END=220422611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 220422612 . C . PASS END=220422625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:9:0,27,327:0,27,255:9,0 chr2 220422626 . G . PASS END=220422635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220422636 . C . PASS END=220422646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220422647 . G . PASS END=220422650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220422651 . T . PASS END=220422651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220422652 . C . PASS END=220422652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 220422653 . G . PASS END=220422685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 220422686 . C . PASS END=220422709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,404:0,33,255:12,0 chr2 220422710 . T . PASS END=220422710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:10,0 chr2 220422711 . G . PASS END=220422717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,465:0,36,255:13,0 chr2 220422718 . C . LowGQ END=220422718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr2 220422719 . A . PASS END=220422736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,435:0,36,255:13,0 chr2 220422737 . C . PASS END=220422738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 220422739 . C . LowGQ END=220422739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,374:0,0,255:12,0 chr2 220422740 . G . PASS END=220422750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:13,0 chr2 220422751 . C . PASS END=220422752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 220422753 . G . PASS END=220422754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:32:16:0,32,557:0,32,255:15,0 chr2 220422755 . T . PASS END=220422761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,590:0,48,255:16,0 chr2 220422762 . C . PASS END=220422762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 220422763 . A . PASS END=220422768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220422769 . T . PASS END=220422769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 220422770 . C . PASS END=220422771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 220422772 . C . PASS END=220422772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220422773 . C . PASS END=220422773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 220422774 . A G, 101.17 PASS DP=18;MQ=249.78;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,18,0:1.000,0.000:18:0,6,0:0,12,0:51:139,54,0,687,54,687:255,54,0:0,0:1.0117e+02,5.1172e+01,3.3134e-05,4.5000e+02,8.5942e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,7,11:0,0,11,7 chr2 220422775 . G . PASS END=220422783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 220422784 . C . PASS END=220422784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:13,0 chr2 220422785 . A . PASS END=220422807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,476:0,42,255:15,0 chr2 220422808 . A . PASS END=220422808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 220422809 . G . PASS END=220422811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,490:0,42,255:15,0 chr2 220422812 . C . PASS END=220422832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,543:0,45,255:16,0 chr2 220422906 . C . PASS END=220422924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,629:0,45,255:17,0 chr2 220422925 . G . PASS END=220422931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220422932 . G . PASS END=220422933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220422934 . C . PASS END=220422943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220422944 . G . PASS END=220422946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220422947 . T . PASS END=220422952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:13,0 chr2 220422953 . A . PASS END=220422953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,520:0,9,255:13,0 chr2 220422954 . C . PASS END=220422965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:32:14:0,32,540:0,32,255:13,0 chr2 220422966 . C . PASS END=220422967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,535:0,42,255:14,0 chr2 220422968 . T . PASS END=220422976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220422977 . T . PASS END=220422986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,527:0,42,255:14,0 chr2 220422987 . G . PASS END=220422997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:13,0 chr2 220422998 . G . PASS END=220423042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:15,0 chr2 220423043 . T . PASS END=220423079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,465:0,36,255:13,0 chr2 220423080 . A . PASS END=220423112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:8:0,21,315:0,22,255:11,0 chr2 220423113 . C . PASS END=220423170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:5:0,12,149:0,15,149:6,0 chr2 220423171 . C . PASS END=220423181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:6:4:0,6,90:0,12,133:3,0 chr2 220423947 . C . PASS END=220423952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1149:0,93,255:31,0 chr2 220423953 . C . PASS END=220423954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:30,0 chr2 220423955 . G . PASS END=220423961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1186:0,93,255:31,0 chr2 220423962 . T . PASS END=220423962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1172:0,60,255:30,0 chr2 220423963 . G . PASS END=220423997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:32:0,80,1038:0,80,255:34,0 chr2 220423998 . A . PASS END=220423998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,875:0,52,255:31,0 chr2 220423999 . C . PASS END=220424042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1189:0,89,255:35,0 chr2 220424043 . A . PASS END=220424043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 220424044 . G . PASS END=220424048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 220424049 . G . PASS END=220424049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1070:0,52,255:27,0 chr2 220424050 . C . PASS END=220424053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:29:0,74,1100:0,74,255:26,0 chr2 220424054 . T . PASS END=220424161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:32:0,80,1077:0,80,255:40,0 chr2 220424162 . A . PASS END=220424162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:48:40:0,48,1262:0,48,255:34,0 chr2 220424163 . A . PASS END=220424200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:36:0,84,1260:0,95,255:37,0 chr2 220424201 . A . PASS END=220424212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:63:28:0,63,945:0,84,255:26,0 chr2 220424213 . G . PASS END=220424219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:54:23:0,54,810:0,69,255:19,0 chr2 220426606 . C . PASS END=220426606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:32,0 chr2 220426607 . T . PASS END=220426730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:84:34:0,84,1304:0,84,255:40,0 chr2 220427124 . C . PASS END=220427135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,560:0,48,255:19,0 chr2 220427136 . C . PASS END=220427172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:23,0 chr2 220427173 . G . PASS END=220427173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 220427174 . T . PASS END=220427204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,922:0,72,255:26,0 chr2 220427205 . G . PASS END=220427205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220427206 . C . PASS END=220427211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:48:29:0,48,972:0,48,255:28,0 chr2 220427212 . C . PASS END=220427212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,931:0,32,255:27,0 chr2 220427213 . A . PASS END=220427213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,980:0,56,255:28,0 chr2 220427214 . G . PASS END=220427214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,976:0,32,255:27,0 chr2 220427215 . G . PASS END=220427215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1155:0,90,255:30,0 chr2 220427216 . C . PASS END=220427217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:29,0 chr2 220427218 . G . PASS END=220427218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:35:30:0,35,955:0,35,255:28,0 chr2 220427219 . C . PASS END=220427222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:29,0 chr2 220427223 . C . PASS END=220427223 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220427224 . A . PASS END=220427224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1009:0,51,255:27,0 chr2 220427225 . G . PASS END=220427227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220427228 . T . PASS END=220427229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1072:0,54,255:28,0 chr2 220427230 . T . PASS END=220427230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1094:0,62,255:28,0 chr2 220427231 . T . PASS END=220427231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220427232 . C . PASS END=220427236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,964:0,48,255:28,0 chr2 220427237 . T . PASS END=220427237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,969:0,32,255:26,0 chr2 220427238 . G . PASS END=220427238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1000:0,48,255:27,0 chr2 220427239 . C . PASS END=220427242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220427243 . A . PASS END=220427243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:23,0 chr2 220427244 . G . PASS END=220427247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1039:0,51,255:26,0 chr2 220427248 . C . PASS END=220427248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220427249 . G . PASS END=220427249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1049:0,54,255:25,0 chr2 220427250 . C . PASS END=220427250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 220427251 . G . PASS END=220427252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:54:31:0,54,1094:0,54,255:26,0 chr2 220427253 . G . PASS END=220427254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:63:34:0,63,1194:0,63,255:28,0 chr2 220427255 . C . PASS END=220427255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1305:0,105,255:29,0 chr2 220427256 . T . PASS END=220427256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,973:0,57,255:28,0 chr2 220427257 . C . PASS END=220427259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1243:0,69,255:32,0 chr2 220427260 . C . PASS END=220427261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1485:0,105,255:33,0 chr2 220427262 . C . PASS END=220427262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1197:0,66,255:32,0 chr2 220427263 . C . PASS END=220427263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:33:35:0,33,1108:0,33,255:31,0 chr2 220427264 . A . PASS END=220427264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:58:35:0,58,1149:0,58,255:31,0 chr2 220427265 . C . PASS END=220427265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1174:0,75,255:32,0 chr2 220427266 . C . PASS END=220427267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 220427268 . C . PASS END=220427268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1210:0,53,255:32,0 chr2 220427269 . C . PASS END=220427270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 220427271 . C . PASS END=220427271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1221:0,69,255:33,0 chr2 220427272 . T . PASS END=220427279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:96:36:0,96,1440:0,108,255:34,0 chr2 220427280 . T . PASS END=220427280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1194:0,72,255:30,0 chr2 220427281 . G . PASS END=220427309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1242:0,99,255:34,0 chr2 220427310 . A . PASS END=220427319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:35:0,89,1257:0,89,255:35,0 chr2 220427320 . G . PASS END=220427320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 220427321 . G . PASS END=220427331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,92,255:32,0 chr2 220427332 . A . PASS END=220427346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,77,255:25,0 chr2 220427347 . G T, 128.26 PASS DP=27;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,27,0:1.000,0.000:27:0,15,0:0,12,0:78:166,81,0,1034,81,1034:255,81,0:0,0:1.2826e+02,7.8259e+01,0.0000e+00,4.5000e+02,1.1303e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,17:0,0,14,13 chr2 220427348 . G . PASS END=220427363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:61:21:0,61,746:0,61,255:22,0 chr2 220427364 . T . PASS END=220427364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,735:0,47,255:20,0 chr2 220427365 . G . PASS END=220427367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220427368 . G . PASS END=220427387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr2 220427388 . A . PASS END=220427393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:16:0,30,450:0,48,255:13,0 chr2 220427394 . C . PASS END=220427394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:27:17:0,27,405:0,51,255:9,0 chr2 220427395 . G A, 49.87 PASS DP=17;MQ=250.00;MQRankSum=3.416;ReadPosRankSum=-1.107;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,8,0:0.471,0.000:17:3,5,0:6,3,0:48:85,0,50,277,314,591:251,0,255:5,0:4.9874e+01,6.6527e-05,5.3000e+01,2.7726e+02,3.4851e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:2,7,3,5:4,5,4,4 chr2 220427396 . T . PASS END=220427396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:24:17:0,24,360:0,51,255:8,0 chr2 220427403 . G . PASS END=220427403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:21:15:0,21,315:0,45,255:7,0 chr2 220428077 . C . PASS END=220428085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:16,0 chr2 220428086 . T . PASS END=220428086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 220428087 . G . PASS END=220428092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,598:0,48,255:18,0 chr2 220428093 . G . PASS END=220428093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,684:0,29,255:19,0 chr2 220428094 . A . PASS END=220428103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,693:0,63,255:22,0 chr2 220428104 . A . PASS END=220428104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,739:0,52,255:21,0 chr2 220428105 . C . PASS END=220428119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,868:0,69,255:26,0 chr2 220428120 . G . PASS END=220428124 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1033:0,84,255:29,0 chr2 220428125 . G . PASS END=220428125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 220428126 . A . PASS END=220428128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 220428129 . C . PASS END=220428129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 220428130 . T . PASS END=220428324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:30:0,82,1060:0,82,255:40,0 chr2 220428325 . G . PASS END=220428349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:61:26:0,61,886:0,61,255:26,0 chr2 220429953 . T . PASS END=220429953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 220429964 . C . PASS END=220429976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1200:0,83,255:38,0 chr2 220429977 . G . PASS END=220429977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1349:0,75,255:37,0 chr2 220429978 . C . PASS END=220430165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,108,1306:0,114,255:40,0 chr2 220430166 . C . PASS END=220430175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:42:0,108,1620:0,126,255:38,0 chr2 220430176 . T . PASS END=220430176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1413:0,71,255:35,0 chr2 220430177 . C . PASS END=220430199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:34:0,87,1305:0,102,255:35,0 chr2 220430200 . A . PASS END=220430200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1233:0,64,255:29,0 chr2 220430201 . C . PASS END=220430202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:30,0 chr2 220430203 . C T, 142.39 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,22,0:0,10,0:92:180,95,0,1166,95,1166:255,99,0:0,0:1.4239e+02,9.2390e+01,0.0000e+00,4.5000e+02,1.2716e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,8,24:0,0,16,16 chr2 220430204 . T . PASS END=220430224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:32:0,81,1215:0,86,255:33,0 chr2 220430225 . G . PASS END=220430237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:65:27:0,65,969:0,65,255:26,0 chr2 220431552 . C . PASS END=220431560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220431561 . T . PASS END=220431605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,357:0,30,255:13,0 chr2 220431606 . G . PASS END=220431613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220431614 . C . PASS END=220431615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220431616 . G . PASS END=220431660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:16:0,44,576:0,44,255:19,0 chr2 220431661 . C . PASS END=220431674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,770:0,63,255:23,0 chr2 220431675 . G . PASS END=220431675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 220431676 . G . PASS END=220431678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:23,0 chr2 220431679 . C . PASS END=220431679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:21,0 chr2 220431680 . C . PASS END=220431691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 220431692 . G . PASS END=220431692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:21,0 chr2 220431693 . G . PASS END=220431707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:61:24:0,61,900:0,61,255:24,0 chr2 220431708 . C . PASS END=220431709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 220431710 . G . PASS END=220431712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220431713 . T . PASS END=220431713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 220431714 . C . PASS END=220431717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 220431718 . A . PASS END=220431718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:22,0 chr2 220431719 . C . PASS END=220431722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,886:0,72,255:24,0 chr2 220431723 . T . PASS END=220431723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,775:0,39,255:22,0 chr2 220431724 . G . PASS END=220431728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,793:0,72,255:24,0 chr2 220431729 . C . PASS END=220431730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:23,0 chr2 220431731 . T . PASS END=220431732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,892:0,72,255:24,0 chr2 220431733 . C . PASS END=220431733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 220431734 . C . PASS END=220431736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220431737 . T . PASS END=220431737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:23,0 chr2 220431738 . T . PASS END=220431738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220431739 . A . PASS END=220431739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,801:0,58,255:23,0 chr2 220431740 . A . PASS END=220431741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 220431742 . G . PASS END=220431742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:21,0 chr2 220431743 . A . PASS END=220431747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 220431748 . G . PASS END=220431748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:20,0 chr2 220431749 . G . PASS END=220431765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 220431766 . G . PASS END=220431766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 220431767 . G . PASS END=220431775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,68,255:21,0 chr2 220431776 . A . PASS END=220431793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,688:0,44,255:19,0 chr2 220431794 . T . PASS END=220431795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220431796 . C . PASS END=220431809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,54,255:18,0 chr2 220431810 . G . PASS END=220431827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:13:0,33,495:0,39,255:13,0 chr2 220431828 . C . LowGQ END=220431828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:10,0 chr2 220431829 . C . PASS END=220431848 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,443:0,39,255:13,0 chr2 220431995 . C . PASS END=220431996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:11,0 chr2 220431997 . A . PASS END=220431997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:10,0 chr2 220431998 . G . PASS END=220432004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 220432005 . A . PASS END=220432005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:12,0 chr2 220432006 . G . PASS END=220432006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220432007 . A . PASS END=220432007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 220432008 . A . PASS END=220432025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,407:0,39,255:13,0 chr2 220432026 . G . PASS END=220432026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 220432027 . G . PASS END=220432034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 220432035 . G . PASS END=220432035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 220432036 . C . PASS END=220432036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220432037 . C . PASS END=220432055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,580:0,45,255:18,0 chr2 220432056 . G . PASS END=220432071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 220432072 . T . PASS END=220432072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,690:0,29,255:19,0 chr2 220432073 . C . PASS END=220432074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220432075 . C . PASS END=220432106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,659:0,41,255:19,0 chr2 220432107 . C . PASS END=220432109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,668:0,21,255:18,0 chr2 220432110 . G . PASS END=220432117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,706:0,57,255:19,0 chr2 220432118 . C . PASS END=220432120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 220432121 . T . PASS END=220432121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,692:0,46,255:20,0 chr2 220432122 . C . PASS END=220432139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:23,0 chr2 220432140 . A . PASS END=220432140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220432141 . A . PASS END=220432146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220432147 . T . PASS END=220432147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,831:0,33,255:19,0 chr2 220432148 . C . PASS END=220432170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,817:0,72,255:24,0 chr2 220432171 . T . PASS END=220432171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:21,0 chr2 220432172 . C . PASS END=220432175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 220432176 . C . PASS END=220432176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:20,0 chr2 220432177 . C . PASS END=220432182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 220432183 . A . PASS END=220432183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:21,0 chr2 220432184 . T . PASS END=220432185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220432186 . A . PASS END=220432186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 220432187 . A . PASS END=220432191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 220432192 . G . PASS END=220432192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 220432193 . T . PASS END=220432199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:23,0 chr2 220432200 . A . PASS END=220432200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 220432201 . G . PASS END=220432221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 220432222 . G . PASS END=220432222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,806:0,30,255:20,0 chr2 220432223 . T . PASS END=220432228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220432229 . G . PASS END=220432230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220432231 . A . PASS END=220432231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220432232 . C . PASS END=220432259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,45,255:19,0 chr2 220432260 . T . PASS END=220432274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:14:0,30,450:0,42,255:13,0 chr2 220432275 . T . PASS END=220432275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 220432276 . C . PASS END=220432279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:10,0 chr2 220432280 . G . PASS END=220432297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:21:9:0,21,315:0,27,255:9,0 chr2 220432435 . C . PASS END=220432435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220432440 . A . PASS END=220432447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,398:0,36,255:13,0 chr2 220432448 . C . PASS END=220432482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,507:0,42,255:19,0 chr2 220432483 . A . PASS END=220432527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,831:0,63,255:23,0 chr2 220432528 . C . PASS END=220432528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 220432529 . A . PASS END=220432541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,945:0,69,255:24,0 chr2 220432542 . G . PASS END=220432546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:29:0,81,1215:0,87,255:28,0 chr2 220432547 . G . PASS END=220432547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1108:0,74,255:28,0 chr2 220432548 . A . PASS END=220432578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 220432579 . C . PASS END=220432579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 220432580 . C . PASS END=220432580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220432581 . C . PASS END=220432581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:27,0 chr2 220432582 . A . PASS END=220432584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220432585 . A . PASS END=220432630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:25:0,62,886:0,62,255:26,0 chr2 220432631 . A . PASS END=220432631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,884:0,44,255:21,0 chr2 220432632 . G . PASS END=220432651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,990:0,69,255:24,0 chr2 220432652 . A . PASS END=220432652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 220432653 . G . PASS END=220432654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:24,0 chr2 220432655 . A . PASS END=220432655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:23,0 chr2 220432656 . C . PASS END=220432667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,900:0,72,255:24,0 chr2 220432668 . G . PASS END=220432668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 220432669 . G . PASS END=220432671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 220432672 . C . PASS END=220432675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 220432676 . C . PASS END=220432691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:42:19:0,42,630:0,57,255:18,0 chr2 220432700 . C . PASS END=220432700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220432771 . G . PASS END=220432771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 220432777 . C . PASS END=220432799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 220432800 . G . PASS END=220432808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220432809 . C . PASS END=220432810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220432811 . G . PASS END=220432817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220432818 . A . PASS END=220432819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220432820 . C . PASS END=220432823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220432824 . C . PASS END=220432827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220432828 . G . PASS END=220432833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220432834 . T . PASS END=220432843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:31:14:0,31,490:0,31,255:13,0 chr2 220432844 . G . PASS END=220432844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 220432845 . T . PASS END=220432865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,466:0,39,255:13,0 chr2 220432866 . A . PASS END=220432866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:13,0 chr2 220432867 . T . PASS END=220432868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 220432869 . A . PASS END=220432869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 220432870 . G . PASS END=220432870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220432871 . G . PASS END=220432871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 220432872 . C . PASS END=220432882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,682:0,44,255:19,0 chr2 220432883 . G . PASS END=220432883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220432884 . C . PASS END=220432885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 220432886 . C . PASS END=220432891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220432892 . G . PASS END=220432912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:18:0,41,607:0,41,255:19,0 chr2 220432913 . G . PASS END=220432913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 220432914 . G . PASS END=220432988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,592:0,40,255:19,0 chr2 220432989 . A . PASS END=220432991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220432992 . C . PASS END=220432992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 220432993 . C . PASS END=220432995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 220432996 . G . PASS END=220433012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:19:0,42,630:0,57,255:19,0 chr2 220433013 . T . PASS END=220433020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220433021 . G . PASS END=220433021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 220433022 . G . PASS END=220433046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,427:0,36,255:12,0 chr2 220434943 . C . PASS END=220434952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,164:0,15,164:5,0 chr2 220434953 . C . PASS END=220434957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:9,0 chr2 220434958 . G . PASS END=220434993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,349:0,30,255:13,0 chr2 220434994 . C . LowGQ END=220434994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr2 220434995 . G . PASS END=220434996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220434997 . C . PASS END=220435011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,421:0,36,255:13,0 chr2 220435012 . C . PASS END=220435020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,515:0,42,255:15,0 chr2 220435021 . T . PASS END=220435021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 220435022 . G . PASS END=220435033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,535:0,45,255:16,0 chr2 220435034 . A G, 94.69 PASS DP=16;MQ=248.40;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:132,48,0,583,48,583:255,48,0:0,0:9.4692e+01,4.4692e+01,1.4755e-04,4.5000e+02,7.9462e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,6:0,0,8,8 chr2 220435035 . A . PASS END=220435041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 220435042 . T . PASS END=220435042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 220435043 . G . PASS END=220435061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,513:0,45,255:15,0 chr2 220435062 . C . PASS END=220435064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220435065 . T . PASS END=220435065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220435066 . C . PASS END=220435067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr2 220435068 . C . PASS END=220435071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:18:0,45,675:0,54,255:18,0 chr2 220435072 . A . PASS END=220435086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 220435087 . G . PASS END=220435087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,610:0,24,255:17,0 chr2 220435088 . G . PASS END=220435088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:18,0 chr2 220435089 . T . PASS END=220435109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 220435110 . T . PASS END=220435111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 220435112 . C . PASS END=220435114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220435115 . G . PASS END=220435121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 220435122 . T . PASS END=220435122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr2 220435123 . C . PASS END=220435129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,671:0,63,255:21,0 chr2 220435130 . G . PASS END=220435130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 220435131 . G . PASS END=220435131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,790:0,63,255:21,0 chr2 220435132 . G . PASS END=220435132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:20,0 chr2 220435133 . C . PASS END=220435133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:21,0 chr2 220435134 . T . PASS END=220435136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220435137 . G . PASS END=220435144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 220435145 . C . PASS END=220435145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 220435146 . A . PASS END=220435149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220435150 . C . PASS END=220435150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:19,0 chr2 220435151 . G . PASS END=220435151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 220435152 . T . PASS END=220435153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:19,0 chr2 220435154 . G . PASS END=220435154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 220435155 . C . PASS END=220435197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:18:0,48,720:0,54,255:19,0 chr2 220435198 . T . PASS END=220435198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 220435199 . A . PASS END=220435199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 220435200 . G . PASS END=220435200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:16,0 chr2 220435201 . G . PASS END=220435208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 220435209 . T . PASS END=220435214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,566:0,34,255:13,0 chr2 220435215 . G . PASS END=220435215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 220435216 . G . PASS END=220435232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 220435233 . G . PASS END=220435237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 220435238 . C . PASS END=220435238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:7,0 chr2 220435239 . T . PASS END=220435251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 220435252 . C . PASS END=220435255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,343:0,30,255:10,0 chr2 220435256 . C . PASS END=220435281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:9,0 chr2 220435282 . G . LowGQ END=220435282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,302:9,0,255:8,0 chr2 220435283 . G . PASS END=220435289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:9:0,24,349:0,27,255:9,0 chr2 220435290 . G . PASS END=220435316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,388:0,33,255:13,0 chr2 220435317 . T . PASS END=220435337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,519:0,42,255:16,0 chr2 220435338 . A . PASS END=220435370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:17,0 chr2 220435371 . C . PASS END=220435374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220435375 . G A, 50.00 PASS DP=16;MQ=246.45;MQRankSum=2.606;ReadPosRankSum=1.586;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:5,11,0:0.688,0.000:16:1,6,0:4,5,0:46:85,0,45,385,179,564:255,0,146:4,0:5.0000e+01,1.1235e-04,4.7994e+01,3.8543e+02,2.1362e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:3,2,6,5:1,4,5,6 chr2 220435376 . T . PASS END=220435412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,404:0,32,255:13,0 chr2 220435413 . G . PASS END=220435497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,349:0,30,255:13,0 chr2 220435498 . C . PASS END=220435506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220435507 . G . PASS END=220435507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 220435508 . G . PASS END=220435508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220435509 . C . PASS END=220435517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 220435518 . A . PASS END=220435545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,304:0,27,255:9,0 chr2 220435546 . G . PASS END=220435568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:6:0,12,180:0,18,233:6,0 chr2 220435569 . A . PASS END=220435676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:1:0,3,39:0,3,39:3,0 chr2 220435677 . G . PASS END=220435706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:12:4:0,12,155:0,12,155:6,0 chr2 220435707 . A . PASS END=220435713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 220435714 . C . PASS END=220435717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,321:0,30,255:10,0 chr2 220435718 . C . PASS END=220435728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220435729 . G . PASS END=220435729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 220435730 . C . PASS END=220435731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:14:10:0,14,316:0,14,255:9,0 chr2 220435732 . G . PASS END=220435734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,404:0,33,255:11,0 chr2 220435735 . C . LowGQ END=220435735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:0:11:0,0,296:6,0,255:10,0 chr2 220435736 . G . PASS END=220435737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,418:0,33,255:11,0 chr2 220435738 . C . PASS END=220435738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,325:0,16,255:10,0 chr2 220435739 . G . PASS END=220435741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,382:0,33,255:11,0 chr2 220435742 . C . PASS END=220435743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,341:0,16,255:10,0 chr2 220435744 . G . PASS END=220435744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 220435745 . C . PASS END=220435745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:11,0 chr2 220435746 . A . PASS END=220435746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,364:0,19,255:11,0 chr2 220435747 . G . PASS END=220435747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 220435748 . C . PASS END=220435749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,372:0,19,255:11,0 chr2 220435750 . G . PASS END=220435751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:12:0,36,419:0,36,255:13,0 chr2 220435752 . C . PASS END=220435753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 220435754 . G . PASS END=220435754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 220435755 . T . PASS END=220435755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 220435756 . G . PASS END=220435756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 220435757 . C . PASS END=220435757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 220435758 . T . PASS END=220435769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr2 220435770 . G . PASS END=220435770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:13,0 chr2 220435771 . C . PASS END=220435772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220435773 . G . PASS END=220435773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:13,0 chr2 220435774 . G . PASS END=220435775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220435776 . A . PASS END=220435776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:13,0 chr2 220435777 . A . PASS END=220435780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,604:0,45,255:16,0 chr2 220435781 . C . PASS END=220435781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 220435782 . A . PASS END=220435786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220435787 . T . PASS END=220435787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:14,0 chr2 220435788 . T . PASS END=220435802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,543:0,45,255:15,0 chr2 220435803 . T . PASS END=220435803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 220435804 . G . PASS END=220435813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:17,0 chr2 220435814 . C . PASS END=220435814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:16,0 chr2 220435815 . T . PASS END=220435834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 220435835 . C . PASS END=220435835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,606:0,23,255:16,0 chr2 220435836 . G . PASS END=220435843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:18,0 chr2 220435844 . C . PASS END=220435853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,798:0,63,255:21,0 chr2 220435854 . A . PASS END=220435864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:19,0 chr2 220435865 . C . PASS END=220435867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220435868 . G . PASS END=220435918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:17:0,44,621:0,44,255:19,0 chr2 220435919 . C . PASS END=220435919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 220435920 . G . PASS END=220435921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:16,0 chr2 220435922 . G . PASS END=220435950 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:12:0,33,443:0,36,255:13,0 chr2 220435951 . T . PASS END=220435951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:10,0 chr2 220435952 . C . PASS END=220435954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 220435975 . A . PASS END=220435975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 220435989 . G . PASS END=220435989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 220435995 . C . PASS END=220435996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:8,0 chr2 220436005 . T . PASS END=220436005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 220436013 . G . PASS END=220436013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 220436027 . G . PASS END=220436027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:12:5:0,12,180:0,15,172:4,0 chr2 220436051 . T . LowGQ END=220436051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,1:5:0:5:0,0,116:24,0,140:3,0 chr2 220436119 . C . PASS END=220436119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 220436144 . G . PASS END=220436144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,853:0,66,255:22,0 chr2 220436163 . G . PASS END=220436163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 220437097 . A . PASS END=220437099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 220437100 . G . PASS END=220437107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 220437108 . C . PASS END=220437119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220437120 . C . PASS END=220437130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220437131 . C . PASS END=220437131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 220437132 . C . PASS END=220437162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,551:0,45,255:19,0 chr2 220437163 . G . PASS END=220437182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 220437183 . T . PASS END=220437193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:20:0,44,682:0,44,255:19,0 chr2 220437194 . T . PASS END=220437212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,768:0,63,255:21,0 chr2 220437213 . T . PASS END=220437247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:19:0,44,675:0,44,255:19,0 chr2 220437248 . G . PASS END=220437249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:17,0 chr2 220437250 . G . PASS END=220437250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:20:0,51,765:0,60,255:17,0 chr2 220437251 . A . PASS END=220437251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:17,0 chr2 220437252 . C . PASS END=220437271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:41:17:0,41,637:0,41,255:17,0 chr2 220437272 . C . PASS END=220437272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:15,0 chr2 220437273 . C . PASS END=220437274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 220437275 . G . PASS END=220437275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220437276 . A . PASS END=220437284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220437285 . C . PASS END=220437285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:13,0 chr2 220437286 . C . PASS END=220437297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,515:0,45,255:15,0 chr2 220437298 . A . PASS END=220437298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 220437299 . C . PASS END=220437299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220437300 . A . PASS END=220437301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 220437302 . A . PASS END=220437302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,535:0,17,255:12,0 chr2 220437303 . C . PASS END=220437303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:13,0 chr2 220437304 . A . PASS END=220437305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,543:0,17,255:12,0 chr2 220437306 . G . PASS END=220437309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 220437310 . T . PASS END=220437310 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,411:0,11,255:11,0 chr2 220437311 . C . PASS END=220437311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 220437312 . T . LowGQ END=220437312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,418:0,0,255:11,0 chr2 220437313 . G . PASS END=220437313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220437314 . A . PASS END=220437314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:11,0 chr2 220437315 . G . PASS END=220437330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:10:0,30,357:0,30,255:12,0 chr2 220437331 . G . PASS END=220437332 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 220437333 . T . PASS END=220437333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,308:0,14,255:8,0 chr2 220437334 . G . LowGQ END=220437334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:0:10:0,0,288:9,0,255:8,0 chr2 220437335 . T . PASS END=220437347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:9:0,21,315:0,27,255:8,0 chr2 220437348 . C . PASS END=220437349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,270:0,11,255:6,0 chr2 220437350 . T . PASS END=220437362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,249:0,21,249:7,0 chr2 220437363 . A . PASS END=220437364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 220439416 . A . PASS END=220439437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,621:0,51,255:19,0 chr2 220439438 . A . PASS END=220439439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 220439440 . C . PASS END=220439441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220439442 . G . PASS END=220439446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220439447 . A . PASS END=220439447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 220439448 . G . PASS END=220439464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,776:0,66,255:25,0 chr2 220439465 . T . PASS END=220439465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,884:0,36,255:24,0 chr2 220439466 . G . PASS END=220439529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr2 220439530 . C . PASS END=220439574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:19,0 chr2 220439575 . C . PASS END=220439576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:15:0,36,540:0,45,255:12,0 chr2 220439577 . G . PASS END=220439577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220439578 . C . PASS END=220439581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220439582 . C . PASS END=220439594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220439595 . C . PASS END=220439629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:32:12:0,32,435:0,32,255:13,0 chr2 220439630 . A . PASS END=220439635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220439636 . G . PASS END=220439636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 220439637 . G . PASS END=220439665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr2 220439666 . C . PASS END=220439673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 220439674 . G . PASS END=220439674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:12,0 chr2 220439675 . G . PASS END=220439678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 220439679 . G . PASS END=220439728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,496:0,42,255:17,0 chr2 220439729 . G . PASS END=220439729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 220439730 . G . PASS END=220439740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,706:0,54,255:19,0 chr2 220439741 . G . PASS END=220439767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,685:0,60,255:23,0 chr2 220439768 . C . PASS END=220439779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:22:0,56,855:0,56,255:19,0 chr2 220439780 . C . PASS END=220439806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:23,0 chr2 220439807 . G . PASS END=220439807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 220439808 . A . PASS END=220439827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 220439828 . G . PASS END=220439828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:21,0 chr2 220439829 . G . PASS END=220439829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220439830 . A . PASS END=220439830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,812:0,53,255:22,0 chr2 220439831 . G . PASS END=220439851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:22:0,63,817:0,66,255:23,0 chr2 220439852 . C . PASS END=220439852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 220439853 . C . PASS END=220439870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,900:0,69,255:24,0 chr2 220439871 . T . PASS END=220439879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,56,255:19,0 chr2 220439880 . G . PASS END=220439889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220439890 . T . PASS END=220439918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:19,0 chr2 220439919 . G . PASS END=220439924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 220439925 . G . PASS END=220439925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,712:0,44,255:19,0 chr2 220439926 . C . PASS END=220439932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 220439933 . C . PASS END=220439937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 220439938 . G . PASS END=220439940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,914:0,62,255:21,0 chr2 220439941 . T . PASS END=220439942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:25:0,57,855:0,75,255:19,0 chr2 220439943 . G . PASS END=220439952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,800:0,66,255:22,0 chr2 220439953 . T . PASS END=220439953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,751:0,50,255:21,0 chr2 220439954 . C . PASS END=220439966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:20,0 chr2 220439967 . C . PASS END=220439971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 220439972 . C . PASS END=220439972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,698:0,32,255:18,0 chr2 220439973 . T . PASS END=220439973 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220439974 . G . PASS END=220439982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220439983 . G . PASS END=220439986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:21:0,54,810:0,63,255:19,0 chr2 220439987 . C . PASS END=220440014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,685:0,60,255:20,0 chr2 220440015 . T . PASS END=220440016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 220440017 . C . PASS END=220440017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220440018 . T . PASS END=220440018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,670:0,32,255:19,0 chr2 220440019 . G . PASS END=220440020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220440021 . C . PASS END=220440025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 220440026 . T . PASS END=220440058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,61,255:26,0 chr2 220440059 . C . PASS END=220440059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,839:0,58,255:20,0 chr2 220440060 . C . PASS END=220440076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:24:0,60,900:0,65,255:23,0 chr2 220440077 . T . PASS END=220440079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:30:23:0,30,776:0,30,255:21,1 chr2 220440080 . C . PASS END=220440085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,65,255:22,0 chr2 220440086 . C . PASS END=220440086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,939:0,50,255:21,0 chr2 220440087 . C . PASS END=220440126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,62,255:26,0 chr2 220440127 . G . PASS END=220440153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,988:0,84,255:28,0 chr2 220440154 . G . PASS END=220440154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1008:0,54,255:25,0 chr2 220440155 . G . PASS END=220440164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 220440165 . G . PASS END=220440166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 220440167 . C . PASS END=220440172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:27:0,65,992:0,65,255:25,0 chr2 220440173 . C . PASS END=220440173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,947:0,42,255:24,0 chr2 220440174 . A . PASS END=220440177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 220440178 . C . PASS END=220440197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,1008:0,81,255:31,0 chr2 220440198 . A . PASS END=220440222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:23:0,63,809:0,69,255:26,0 chr2 220440223 . T . PASS END=220440234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:20:0,42,630:0,60,255:18,0 chr2 220440235 . G . PASS END=220440248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:36:13:0,36,540:0,39,255:13,0 chr2 220462842 . A . PASS END=220462902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:47:0,101,1799:0,101,255:40,0 chr2 220465957 . G . PASS END=220465963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,908:0,72,255:26,0 chr2 220465964 . G . PASS END=220465977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1215:0,84,255:34,0 chr2 220465978 . G . PASS END=220465978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1263:0,67,255:34,0 chr2 220465979 . T . PASS END=220466161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:95:35:0,95,1288:0,95,255:40,0 chr2 220466162 . G . PASS END=220466171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:90:36:0,90,1350:0,98,255:33,0 chr2 220466172 . G . PASS END=220466172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:31,0 chr2 220466173 . T . PASS END=220466180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:93:33:0,93,1395:0,99,255:32,0 chr2 220466181 . A . PASS END=220466181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:30,0 chr2 220466182 . G . PASS END=220466194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1215:0,96,255:32,0 chr2 220466195 . A . PASS END=220466195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:29,0 chr2 220466196 . G . PASS END=220466198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:93:35:0,93,1395:0,105,255:32,0 chr2 220466199 . G T, 152.33 PASS DP=35;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,35,0:1.000,0.000:35:0,22,0:0,13,0:102:190,105,0,290,290,290:255,108,0:0,0:1.5233e+02,1.0233e+02,0.0000e+00,2.8710e+02,3.2187e+02,2.9011e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,16,19:0,0,15,20 chr2 220466200 . C . PASS END=220466214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:35:0,91,1211:0,91,255:34,0 chr2 220466215 . G . PASS END=220466215 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1165:0,69,255:31,0 chr2 220466216 . A . PASS END=220466219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1173:0,88,255:32,0 chr2 220466220 . T . PASS END=220466220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1103:0,60,255:32,0 chr2 220466221 . G . PASS END=220466228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:32,0 chr2 220466363 . C . PASS END=220466395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:97:45:0,97,1540:0,97,255:40,0 chr2 220466396 . C . PASS END=220466419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:87:44:0,87,1432:0,87,255:40,0 chr2 220466420 . T . PASS END=220466420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,4:44:66:44:0,66,1333:0,66,255:36,0 chr2 220466421 . C . PASS END=220466437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:82:43:0,82,1435:0,82,255:40,0 chr2 220466710 . C . PASS END=220466721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:22,0 chr2 220466722 . C . PASS END=220466722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:23,0 chr2 220466723 . C . PASS END=220466756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,856:0,62,255:26,0 chr2 220466757 . C . PASS END=220466783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:19:0,45,675:0,57,255:19,0 chr2 220466784 . C . PASS END=220466784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 220466785 . A . PASS END=220466794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 220466795 . A . PASS END=220466795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:16,0 chr2 220466796 . G . PASS END=220466805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,765:0,54,255:18,0 chr2 220467190 . G . PASS END=220467199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,828:0,69,255:26,0 chr2 220467200 . C . PASS END=220467200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 220467201 . A . PASS END=220467203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220467204 . C . PASS END=220467247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1078:0,84,255:35,0 chr2 220467248 . T . PASS END=220467248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1271:0,75,255:34,0 chr2 220467249 . T . PASS END=220467297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:32:0,80,1125:0,80,255:36,0 chr2 220467427 . C . PASS END=220467498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:86:34:0,86,1213:0,86,255:39,0 chr2 220470330 . G . PASS END=220470425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:83:31:0,83,976:0,83,255:40,0 chr2 220470426 . C . PASS END=220470426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:76:41:0,76,1398:0,76,255:33,0 chr2 220470427 . T . PASS END=220470430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:95:37:0,95,1319:0,95,255:36,0 chr2 220470431 . A . PASS END=220470431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1241:0,56,255:33,0 chr2 220470432 . G . PASS END=220470433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 220470434 . C . PASS END=220470435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1150:0,75,255:33,0 chr2 220470436 . A . PASS END=220470440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1302:0,92,255:35,0 chr2 220470441 . C . PASS END=220470441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:44:36:0,44,1185:0,44,255:30,0 chr2 220470442 . T . PASS END=220470443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1263:0,89,255:33,0 chr2 220470444 . C . PASS END=220470444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1115:0,55,255:30,0 chr2 220470445 . G . PASS END=220470453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:35:0,87,1209:0,88,255:33,0 chr2 220470454 . A . PASS END=220470454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1119:0,50,255:26,0 chr2 220470455 . T . PASS END=220470456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:72:35:0,72,1080:0,105,255:24,0 chr2 220470678 . G . PASS END=220470760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:84:36:0,84,1335:0,84,255:40,0 chr2 220470761 . C . PASS END=220470762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1282:0,70,255:31,0 chr2 220470763 . G . PASS END=220470773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,86,255:31,0 chr2 220470774 . T . PASS END=220470774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:78:32:0,78,1170:0,80,255:26,0 chr2 220470775 . C . PASS END=220470778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 220470779 . A . PASS END=220470781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:69:31:0,69,1035:0,80,255:24,0 chr2 220470917 . C . PASS END=220470929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:27:0,81,964:0,81,255:31,0 chr2 220470930 . G . PASS END=220470930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 220470931 . G . PASS END=220470939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:31:0,83,1133:0,83,255:33,0 chr2 220470940 . T . PASS END=220470940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1196:0,71,255:32,0 chr2 220470941 . T . PASS END=220470951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:80:34:0,80,1335:0,80,255:37,0 chr2 220470952 . T . PASS END=220470952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1279:0,78,255:35,0 chr2 220470953 . G . PASS END=220470979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:87:37:0,87,1343:0,87,255:37,0 chr2 220470980 . T . PASS END=220470980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:33,0 chr2 220470981 . T . PASS END=220470989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1233:0,86,255:33,0 chr2 220470990 . G . PASS END=220470990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1218:0,71,255:29,0 chr2 220470991 . G . PASS END=220471012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:29:0,84,1260:0,87,255:31,0 chr2 220471198 . T . PASS END=220471198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 220471199 . T . PASS END=220471199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1252:0,72,255:33,0 chr2 220471200 . C . PASS END=220471206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 220471207 . G . PASS END=220471207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1268:0,72,255:32,0 chr2 220471208 . A . PASS END=220471212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1258:0,91,255:35,0 chr2 220471213 . A . PASS END=220471213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:33,0 chr2 220471214 . A . PASS END=220471231 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:36:0,81,1203:0,81,255:36,0 chr2 220471232 . A . PASS END=220471232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:35,0 chr2 220471233 . T . PASS END=220471239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,108,1192:0,108,255:36,0 chr2 220471434 . A . PASS END=220471439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:33:0,83,1174:0,83,255:35,0 chr2 220471440 . A . PASS END=220471440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1280:0,69,255:34,0 chr2 220471441 . C . PASS END=220471442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:92:36:0,92,1288:0,92,255:32,0 chr2 220471443 . T . PASS END=220471443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1231:0,75,255:30,0 chr2 220471444 . C . PASS END=220471580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:33:0,81,1166:0,85,255:40,0 chr2 220471706 . A . PASS END=220471859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:40:0,110,1557:0,110,255:40,0 chr2 220472769 . G . PASS END=220472771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,0:6:18:6:0,18,233:0,18,233:6,0 chr2 220472772 . G . PASS END=220472777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,250:0,21,250:9,0 chr2 220472778 . T . PASS END=220472778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 220472779 . G . PASS END=220472779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 220472780 . C . PASS END=220472806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,388:0,30,255:11,0 chr2 220472807 . A . PASS END=220472807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:10,0 chr2 220472808 . G . PASS END=220472839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:13,0 chr2 220472840 . C . PASS END=220472842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,498:0,42,255:14,0 chr2 220472843 . C . PASS END=220472844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220472845 . G . PASS END=220472846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 220472847 . A . PASS END=220472847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 220472848 . C . PASS END=220472855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,599:0,51,255:17,0 chr2 220472856 . A . PASS END=220472856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 220472857 . C . PASS END=220472933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,629:0,44,255:19,0 chr2 220472934 . G . PASS END=220472934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 220472935 . C . PASS END=220472937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 220472938 . C . PASS END=220472938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 220472939 . G . PASS END=220472979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:16,0 chr2 220472980 . A . PASS END=220472981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 220472982 . G . PASS END=220472983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 220472984 . C . PASS END=220472984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220472985 . C . PASS END=220472985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 220472986 . C . PASS END=220472986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,729:0,35,255:17,0 chr2 220472987 . C . PASS END=220472999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,660:0,43,255:19,0 chr2 220473000 . A . PASS END=220473000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,596:0,5,255:16,0 chr2 220473001 . G . PASS END=220473001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220473002 . A . PASS END=220473003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220473004 . A . PASS END=220473005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,582:0,30,255:18,0 chr2 220473006 . T . PASS END=220473006 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 220473007 . G . PASS END=220473009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220473010 . A . PASS END=220473010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,684:0,46,255:20,0 chr2 220473011 . G . PASS END=220473011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 220473012 . A . PASS END=220473012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr2 220473013 . G . PASS END=220473018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,701:0,63,255:21,0 chr2 220473019 . C . PASS END=220473019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,668:0,32,255:19,0 chr2 220473020 . A . LowGQ END=220473020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,4:21:0:21:0,0,549:39,0,255:16,0 chr2 220473021 . G . PASS END=220473023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220473024 . C . PASS END=220473024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:11:22:0,11,698:0,11,255:19,0 chr2 220473025 . G . PASS END=220473026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 220473027 . A . PASS END=220473027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,706:0,36,255:20,0 chr2 220473028 . G . PASS END=220473029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 220473030 . C . PASS END=220473031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,674:0,33,255:20,0 chr2 220473032 . C . PASS END=220473032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,635:0,16,255:18,0 chr2 220473033 . A . LowGQ END=220473033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,587:14,0,255:17,0 chr2 220473034 . G . PASS END=220473035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220473036 . A . PASS END=220473036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:19,0 chr2 220473037 . G . PASS END=220473038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220473039 . A . PASS END=220473039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 220473040 . G . PASS END=220473040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220473041 . G . PASS END=220473041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:19,0 chr2 220473042 . A . PASS END=220473042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 220473043 . A . PASS END=220473043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:32:22:0,32,586:0,32,255:19,0 chr2 220473044 . G . PASS END=220473044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220473045 . A . PASS END=220473045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,715:0,49,255:20,0 chr2 220473046 . G . PASS END=220473047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220473048 . A . PASS END=220473048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,676:0,33,255:16,0 chr2 220473049 . G . PASS END=220473050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,642:0,52,255:19,0 chr2 220473051 . A . PASS END=220473051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,3:23:19:23:0,19,629:0,19,255:17,0 chr2 220473052 . G . PASS END=220473052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:19,0 chr2 220473053 . G . PASS END=220473053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220473054 . A . PASS END=220473054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:18,0 chr2 220473055 . G . PASS END=220473057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 220473058 . G . PASS END=220473058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 220473059 . A . PASS END=220473060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,715:0,39,255:19,0 chr2 220473061 . G . PASS END=220473062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 220473063 . A . PASS END=220473063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:20,0 chr2 220473064 . G . PASS END=220473064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:19,0 chr2 220473065 . G . PASS END=220473068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,709:0,66,255:22,0 chr2 220473069 . A . PASS END=220473069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,701:0,35,255:20,0 chr2 220473070 . G . PASS END=220473071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220473072 . A . PASS END=220473072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,678:0,49,255:20,0 chr2 220473073 . G . PASS END=220473074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220473075 . A . PASS END=220473075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,701:0,49,255:20,0 chr2 220473076 . G . PASS END=220473079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,839:0,69,255:23,0 chr2 220473080 . G . PASS END=220473080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr2 220473081 . A . PASS END=220473083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,825:0,72,255:24,0 chr2 220473084 . T . PASS END=220473084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:23,0 chr2 220473085 . G . PASS END=220473095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,833:0,61,255:26,0 chr2 220473096 . G . PASS END=220473096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:32:29:0,32,953:0,32,255:25,0 chr2 220473097 . A . PASS END=220473097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 220473098 . G . PASS END=220473101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220473102 . A . PASS END=220473102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:26,0 chr2 220473103 . G . PASS END=220473107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:27,0 chr2 220473108 . C . PASS END=220473139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,830:0,61,255:26,0 chr2 220473140 . A . PASS END=220473141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:20,0 chr2 220473142 . G . PASS END=220473149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 220473150 . A . PASS END=220473150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,731:0,27,255:17,0 chr2 220473151 . A . PASS END=220473151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:54:22:0,54,810:0,66,255:18,0 chr2 220473152 . G . PASS END=220473152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220473305 . C . PASS END=220473308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220473309 . A . PASS END=220473317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 220473318 . C . PASS END=220473320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220473321 . C . PASS END=220473321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 220473322 . T . PASS END=220473323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 220473324 . G . PASS END=220473324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:13,0 chr2 220473325 . T . PASS END=220473327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 220473328 . G . PASS END=220473328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 220473329 . T . PASS END=220473341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,668:0,48,255:18,0 chr2 220473342 . G . PASS END=220473342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 220473343 . G . PASS END=220473354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 220473355 . G A, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,8,0:0,11,0:54:142,57,0,729,57,729:255,57,0:0,0:1.0418e+02,5.4182e+01,1.6567e-05,4.5000e+02,8.8952e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,9:0,0,11,8 chr2 220473356 . T . PASS END=220473373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,631:0,54,255:18,0 chr2 220473374 . T . PASS END=220473375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr2 220473376 . C . PASS END=220473392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,651:0,41,255:19,0 chr2 220473393 . C . PASS END=220473423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:16:0,43,475:0,43,255:19,0 chr2 220473424 . C . PASS END=220473427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220473428 . C . PASS END=220473439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,630:0,45,255:15,0 chr2 220473440 . T . PASS END=220473440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 220473441 . G . PASS END=220473500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,576:0,41,255:19,0 chr2 220473501 . C . PASS END=220473503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220473504 . G . PASS END=220473510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:14,0 chr2 220473819 . G . PASS END=220473819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 220473820 . G . PASS END=220473821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220473822 . T . PASS END=220473822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1014:0,68,255:26,0 chr2 220473823 . C . PASS END=220473870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:28:0,80,1094:0,80,255:33,0 chr2 220473871 . T . PASS END=220473871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:64:34:0,64,1241:0,64,255:30,0 chr2 220473872 . C . PASS END=220473881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:31:0,86,1157:0,86,255:31,0 chr2 220473882 . C . PASS END=220473882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 220473883 . G . PASS END=220473883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1127:0,93,255:31,0 chr2 220473884 . G . PASS END=220473884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1094:0,54,255:30,0 chr2 220473885 . C . PASS END=220473897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1164:0,93,255:31,0 chr2 220473898 . A . PASS END=220473899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:77:31:0,77,1054:0,77,255:29,0 chr2 220473900 . T . PASS END=220473905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 220473906 . C . PASS END=220473924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:25:0,66,990:0,75,255:25,0 chr2 220473925 . C . PASS END=220473925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 220473926 . A . PASS END=220473927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220473928 . C . PASS END=220473935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:23:0,54,810:0,69,255:19,0 chr2 220474085 . G . PASS END=220474260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:81:32:0,81,1215:0,90,255:40,0 chr2 220474261 . A . PASS END=220474262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:72:32:0,72,1080:0,96,255:25,0 chr2 220474593 . A . PASS END=220474603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:47:0,120,1800:0,125,255:40,0 chr2 220474790 . A . PASS END=220474833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,1:62:99:59:0,120,1800:0,162,255:40,0 chr2 220476326 . A . PASS END=220476347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,947:0,78,255:26,0 chr2 220476348 . C . PASS END=220476385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:83:29:0,83,1102:0,83,255:33,0 chr2 220476386 . G . PASS END=220476386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1180:0,60,255:31,0 chr2 220476387 . G . PASS END=220476405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:89:32:0,89,1202:0,89,255:34,0 chr2 220476406 . C . PASS END=220476442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:89:35:0,89,1239:0,89,255:36,0 chr2 220476443 . C T, 148.41 PASS DP=34;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,15,0:0,19,0:98:186,101,0,1252,101,1252:255,102,0:0,0:1.4841e+02,9.8409e+01,0.0000e+00,4.5000e+02,1.3318e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,24,10:0,0,19,15 chr2 220476444 . T . PASS END=220476454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:32,0 chr2 220476455 . T . PASS END=220476455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1119:0,79,255:28,0 chr2 220476456 . C . PASS END=220476465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1139:0,80,255:30,0 chr2 220476466 . C . PASS END=220476466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 220476467 . C . PASS END=220476480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 220476481 . C . PASS END=220476488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1155:0,80,255:29,0 chr2 220476489 . C . PASS END=220476498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:72:30:0,72,1047:0,74,255:26,0 chr2 220476499 . A . PASS END=220476501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 220476502 . A . PASS END=220476502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr2 220476503 . G . PASS END=220476503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 220476504 . C . PASS END=220476504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:27,0 chr2 220476505 . C . PASS END=220476509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 220476510 . T . PASS END=220476510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 220476511 . C . PASS END=220476513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220476514 . G . PASS END=220476514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 220476515 . C . PASS END=220476516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220476517 . C . PASS END=220476517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1053:0,71,255:27,0 chr2 220476518 . C . PASS END=220476525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1049:0,87,255:31,0 chr2 220476526 . C . PASS END=220476526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 220476527 . G . PASS END=220476528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr2 220476529 . G . PASS END=220476529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 220476530 . A . PASS END=220476531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:31,0 chr2 220476532 . C . PASS END=220476532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1072:0,62,255:30,0 chr2 220476533 . A . PASS END=220476539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 220476540 . T . PASS END=220476540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1072:0,65,255:30,0 chr2 220476541 . T . PASS END=220476550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:80:32:0,80,1109:0,80,255:32,0 chr2 220476551 . G . PASS END=220476551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1202:0,63,255:28,0 chr2 220476552 . T . PASS END=220476556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:35:0,84,1260:0,92,255:29,0 chr2 220476677 . C . PASS END=220476682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:47:0,120,1739:0,120,255:40,0 chr2 220476683 . A . PASS END=220476780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:46:0,120,1800:0,121,255:40,0 chr2 220477850 . G . PASS END=220477852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,607:0,51,255:17,0 chr2 220477853 . C . PASS END=220477853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 220477854 . C . PASS END=220477867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,562:0,51,255:19,0 chr2 220477868 . G . PASS END=220477888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,701:0,60,255:23,0 chr2 220477889 . T . PASS END=220477889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:20,0 chr2 220477890 . G . PASS END=220477891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 220477892 . C . PASS END=220477892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,768:0,52,255:20,0 chr2 220477893 . T . PASS END=220477910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,772:0,69,255:23,0 chr2 220477911 . G . PASS END=220477930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:18:0,52,690:0,52,255:19,0 chr2 220477931 . G . PASS END=220477931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 220477932 . T . PASS END=220477940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,623:0,54,255:18,0 chr2 220477941 . A . PASS END=220477941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:16,0 chr2 220477942 . G . PASS END=220477945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:17,0 chr2 220477946 . C . PASS END=220477946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,560:0,15,255:15,0 chr2 220477947 . G . PASS END=220477947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 220478474 . T . PASS END=220478475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 220478476 . A . PASS END=220478476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:28,0 chr2 220478477 . G . PASS END=220478477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 220478478 . C . PASS END=220478478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:30,0 chr2 220478479 . C . PASS END=220478479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 220478480 . T . PASS END=220478480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:30,0 chr2 220478481 . C . PASS END=220478591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:30:0,80,1074:0,80,255:37,0 chr2 220478592 . C . PASS END=220478621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:61:26:0,61,886:0,61,255:25,0 chr2 220478622 . C . PASS END=220478623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,825:0,58,255:22,0 chr2 220478624 . T . PASS END=220478626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 220478627 . C . PASS END=220478627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:20,0 chr2 220478628 . C . PASS END=220478632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 220478633 . C . PASS END=220478643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:22:0,42,630:0,49,255:15,0 chr2 220478644 . A . PASS END=220478644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,535:0,31,255:13,0 chr2 220478645 . G . PASS END=220478648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220478649 . C . PASS END=220478649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,454:0,17,255:13,0 chr2 220478650 . T . PASS END=220478652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220478883 . A . PASS END=220478884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,906:0,62,255:25,0 chr2 220478885 . G . PASS END=220478887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:28,0 chr2 220478888 . T . PASS END=220478888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 220478889 . T . PASS END=220478899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1047:0,84,255:28,0 chr2 220478900 . C . PASS END=220478900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 220478901 . C . PASS END=220478939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:29,0 chr2 220478940 . A . PASS END=220478940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 220478941 . G . PASS END=220478942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:27,0 chr2 220478943 . T . PASS END=220478964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,925:0,64,255:26,0 chr2 220479198 . G . PASS END=220479274 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:94:42:0,94,1408:0,94,255:40,0 chr2 220479275 . C . PASS END=220479311 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:32:0,86,1233:0,86,255:33,0 chr2 220479312 . T C, 143.31 PASS DP=32;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,32,0:1.000,0.000:32:0,18,0:0,14,0:93:181,96,0,1233,96,1233:255,96,0:0,0:1.4331e+02,9.3308e+01,0.0000e+00,4.5000e+02,1.2808e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,9,23:0,0,15,17 chr2 220479313 . A . PASS END=220479326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 220479327 . A . PASS END=220479349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:27:0,66,990:0,81,255:26,0 chr2 220479350 . A . PASS END=220479374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:22,0 chr2 220479375 . T . PASS END=220479410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,623:0,54,255:19,0 chr2 220479411 . A . PASS END=220479420 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:15:0,30,450:0,45,255:13,0 chr2 220479816 . G . PASS END=220479816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 220479817 . C . PASS END=220479924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,529:0,42,255:16,0 chr2 220479925 . C . PASS END=220479925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:15,0 chr2 220479926 . G . PASS END=220479961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:18,0 chr2 220479962 . C . PASS END=220479962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:13,0 chr2 220479963 . C . PASS END=220479966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 220479967 . T . PASS END=220479974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:15:0,39,585:0,45,255:13,0 chr2 220479975 . T . PASS END=220479983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,551:0,45,255:16,0 chr2 220479984 . A . PASS END=220479984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 220479985 . G . PASS END=220479997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,582:0,48,255:16,0 chr2 220479998 . A . PASS END=220479999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220480000 . C . PASS END=220480002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220480003 . G . PASS END=220480019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:13:0,30,450:0,39,255:13,0 chr2 220480020 . A . PASS END=220480057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,296:0,27,255:9,0 chr2 220480058 . G . PASS END=220480058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,286:0,11,255:8,0 chr2 220480059 . A . PASS END=220480062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,327:0,27,255:9,0 chr2 220480063 . G . PASS END=220480063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:18:9:0,18,270:0,27,255:6,0 chr2 220480429 . G . PASS END=220480512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:61:0,120,1800:0,182,255:40,0 chr2 220480541 . G . PASS END=220480549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:51:0,120,1800:0,123,255:40,0 chr2 220480766 . G . PASS END=220480910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:31:0,80,1147:0,80,255:40,0 chr2 220480911 . G . PASS END=220480915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,87,255:26,0 chr2 220492715 . A . PASS END=220492715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,413:0,15,255:13,0 chr2 220492716 . T . PASS END=220492716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220492717 . G . PASS END=220492717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,488:0,31,255:14,0 chr2 220492718 . G . PASS END=220492721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:15,0 chr2 220492722 . A . PASS END=220492722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,404:0,12,255:11,0 chr2 220492723 . C . PASS END=220492723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,482:0,28,255:12,0 chr2 220492724 . G . PASS END=220492731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220492732 . C . PASS END=220492732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:11,0 chr2 220492733 . C . PASS END=220492746 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 220492747 . C . PASS END=220492747 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:12,0 chr2 220492748 . G . PASS END=220492748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 220492749 . C . PASS END=220492749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,418:0,22,255:12,0 chr2 220492750 . C . PASS END=220492757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,443:0,39,255:13,0 chr2 220492758 . T . PASS END=220492758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,382:0,22,255:12,0 chr2 220492759 . A . PASS END=220492760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 220492761 . C . PASS END=220492761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,377:0,6,255:11,0 chr2 220492762 . C . PASS END=220492763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,504:0,39,255:13,0 chr2 220492764 . A . PASS END=220492764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,336:0,22,255:11,0 chr2 220492765 . G . PASS END=220492765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 220493127 . G . PASS END=220493134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 220493135 . G . PASS END=220493138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 220493139 . T . PASS END=220493139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,463:0,15,255:13,0 chr2 220493140 . T . PASS END=220493143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220493144 . G . PASS END=220493144 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 220493145 . G . PASS END=220493145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220493146 . A . PASS END=220493147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 220493148 . C . PASS END=220493151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 220493152 . C . PASS END=220493152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 220493153 . T . PASS END=220493154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220493155 . T . PASS END=220493155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,512:0,9,255:13,0 chr2 220493156 . A . PASS END=220493161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 220493162 . A . PASS END=220493162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 220493163 . G . PASS END=220493166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 220493167 . T . PASS END=220493167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,1 chr2 220493168 . G . PASS END=220493171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:16:0,12,541:0,12,255:17,1 chr2 220493172 . G . PASS END=220493180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,637:0,51,255:17,0 chr2 220493181 . G . PASS END=220493181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:16,0 chr2 220493182 . A . PASS END=220493196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:46:18:0,46,690:0,46,255:19,0 chr2 220493197 . C . PASS END=220493200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 220493201 . G . PASS END=220493211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,737:0,47,255:19,0 chr2 220493212 . G . PASS END=220493212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220493213 . G . PASS END=220493213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 220493214 . T . PASS END=220493255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:23,0 chr2 220493256 . A . PASS END=220493287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:16:0,48,545:0,48,255:19,0 chr2 220493288 . T . PASS END=220493288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 220493289 . G . PASS END=220493292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 220493431 . A . PASS END=220493437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:26:0,61,878:0,61,255:26,0 chr2 220493438 . G . PASS END=220493446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 220493447 . T . PASS END=220493488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,69,255:26,0 chr2 220493866 . T . PASS END=220493879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,396:0,33,255:12,0 chr2 220493880 . T . PASS END=220493941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,527:0,42,255:17,0 chr2 220493942 . G . PASS END=220493949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220493950 . C . PASS END=220493957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,488:0,42,255:14,0 chr2 220493958 . C . PASS END=220493962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220493963 . C . PASS END=220493979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,505:0,45,255:15,0 chr2 220493980 . A . PASS END=220493980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 220493981 . G . PASS END=220493981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,543:0,45,255:15,0 chr2 220493982 . A . PASS END=220493982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,504:0,31,255:15,0 chr2 220493983 . A . PASS END=220493988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr2 220493989 . A . PASS END=220493990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 220493991 . A . PASS END=220493994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:15,0 chr2 220493995 . C . PASS END=220493995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 220493996 . T . PASS END=220493996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220493997 . G . PASS END=220494004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220494005 . C . PASS END=220494009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,543:0,42,255:14,0 chr2 220494010 . A . PASS END=220494010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:13,0 chr2 220494011 . G . PASS END=220494014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220494015 . A . PASS END=220494017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220494018 . C . PASS END=220494019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 220494020 . T . PASS END=220494020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr2 220494021 . C . PASS END=220494030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:45:17:0,45,646:0,46,255:20,0 chr2 220494031 . A . PASS END=220494031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,662:0,27,255:20,0 chr2 220494032 . G . PASS END=220494032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 220494033 . G . PASS END=220494033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:19,0 chr2 220494034 . A . PASS END=220494039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 220494040 . G . PASS END=220494040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 220494041 . A . PASS END=220494041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:23,0 chr2 220494042 . G . PASS END=220494042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220494043 . C . PASS END=220494043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,774:0,42,255:22,0 chr2 220494044 . T . PASS END=220494044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,838:0,72,255:24,0 chr2 220494045 . G . PASS END=220494045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 220494046 . G . PASS END=220494046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 220494047 . A . LowGQ END=220494047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,4:24:0:24:0,0,665:30,0,255:20,0 chr2 220494048 . G . PASS END=220494049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,825:0,72,255:24,0 chr2 220494050 . G . PASS END=220494050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,817:0,58,255:24,0 chr2 220494051 . G . PASS END=220494051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,872:0,75,255:25,0 chr2 220494052 . A . PASS END=220494052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 220494053 . T . PASS END=220494054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220494055 . A . PASS END=220494055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,847:0,58,255:23,0 chr2 220494056 . G . PASS END=220494056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220494057 . G . PASS END=220494057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,829:0,58,255:23,0 chr2 220494058 . A . PASS END=220494058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220494059 . A . PASS END=220494059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,845:0,36,255:23,0 chr2 220494060 . G . PASS END=220494060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:25,0 chr2 220494061 . A . PASS END=220494061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,894:0,42,255:25,0 chr2 220494062 . G . PASS END=220494063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr2 220494064 . A . PASS END=220494064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,858:0,50,255:25,0 chr2 220494065 . G . PASS END=220494065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220494066 . G . PASS END=220494066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,853:0,26,255:24,0 chr2 220494067 . A . PASS END=220494067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220494068 . A . PASS END=220494068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,917:0,42,255:25,0 chr2 220494069 . G . PASS END=220494071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 220494072 . G . PASS END=220494072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,894:0,50,255:25,0 chr2 220494073 . A . PASS END=220494073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,869:0,26,255:25,0 chr2 220494074 . G . PASS END=220494074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1023:0,81,255:27,0 chr2 220494075 . G . PASS END=220494075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,872:0,64,255:26,0 chr2 220494076 . A . PASS END=220494076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 220494077 . A . PASS END=220494077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:26,0 chr2 220494078 . G . PASS END=220494078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:34:27:0,34,869:0,34,255:25,0 chr2 220494079 . A . PASS END=220494079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,919:0,81,255:27,0 chr2 220494080 . G . PASS END=220494080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,945:0,65,255:26,0 chr2 220494081 . G . PASS END=220494081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,909:0,64,255:26,0 chr2 220494082 . A . PASS END=220494082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1039:0,84,255:28,0 chr2 220494083 . A . PASS END=220494084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,984:0,67,255:27,0 chr2 220494085 . G . PASS END=220494085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,922:0,51,255:26,0 chr2 220494086 . A . PASS END=220494086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 220494087 . G . PASS END=220494087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,3:28:12:28:0,12,807:0,12,255:25,0 chr2 220494088 . A . PASS END=220494088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 220494089 . A . PASS END=220494090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,822:0,67,255:27,0 chr2 220494091 . C . PASS END=220494092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220494093 . G . PASS END=220494107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:66:24:0,66,947:0,67,255:25,0 chr2 220494108 . G . PASS END=220494108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 220494109 . A . PASS END=220494117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 220494118 . A C, 116.21 PASS DP=23;MQ=249.53;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,23,0:1.000,0.000:23:0,17,0:0,6,0:66:154,69,0,856,69,856:255,72,0:0,0:1.1621e+02,6.6214e+01,1.0354e-06,4.5000e+02,1.0098e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,10,13:0,0,14,9 chr2 220494119 . C . PASS END=220494122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 220494123 . G . PASS END=220494143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 220494302 . T . PASS END=220494327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,468:0,42,255:16,0 chr2 220494328 . C . PASS END=220494328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:13,0 chr2 220494329 . A . PASS END=220494329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220494330 . G . PASS END=220494337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 220494338 . C . PASS END=220494407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:15:0,41,537:0,41,255:19,0 chr2 220494408 . A . PASS END=220494417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:13,0 chr2 220494794 . G . PASS END=220494826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,476:0,42,255:16,0 chr2 220494827 . C . PASS END=220494827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 220494828 . A . PASS END=220494866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,576:0,48,255:19,0 chr2 220494867 . C . PASS END=220494893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,678:0,60,255:24,0 chr2 220494894 . C . PASS END=220494894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,869:0,44,255:24,0 chr2 220494895 . G . PASS END=220494898 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:25:0,61,886:0,61,255:25,0 chr2 220494899 . C . PASS END=220494915 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:30,0 chr2 220494916 . A . PASS END=220494916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1033:0,76,255:29,0 chr2 220494917 . G . PASS END=220494918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 220494919 . A . PASS END=220494919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:28,0 chr2 220494920 . A . PASS END=220494924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 220494925 . G . PASS END=220494928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:69:30:0,69,1035:0,90,255:24,0 chr2 220494929 . C . PASS END=220494929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1047:0,51,255:23,0 chr2 220494930 . T . PASS END=220494934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:30:0,72,1080:0,74,255:24,0 chr2 220494935 . C . PASS END=220494935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,988:0,59,255:23,0 chr2 220494936 . C . PASS END=220494937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:67:28:0,67,970:0,67,255:26,0 chr2 220494938 . A . PASS END=220494941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 220494942 . G . PASS END=220494953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:27:0,71,1053:0,71,255:26,0 chr2 220494954 . C . PASS END=220494954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,925:0,54,255:22,0 chr2 220494955 . T . PASS END=220494962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,870:0,61,255:24,0 chr2 220494963 . C . PASS END=220494963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 220494964 . G . PASS END=220494966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 220494967 . T . PASS END=220494967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:19,0 chr2 220494968 . G . PASS END=220494977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 220494978 . A . PASS END=220494978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,698:0,46,255:20,0 chr2 220494979 . G . PASS END=220494980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220494981 . G . PASS END=220494981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:19,0 chr2 220494982 . C . PASS END=220494984 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 220494985 . T . PASS END=220494985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:19,0 chr2 220494986 . G . PASS END=220495038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,800:0,66,255:22,0 chr2 220495039 . A . PASS END=220495039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 220495040 . G . PASS END=220495040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220495041 . A . PASS END=220495054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,46,255:18,0 chr2 220495055 . A . PASS END=220495069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:14:0,33,495:0,42,255:13,0 chr2 220495070 . G . PASS END=220495070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 220495071 . A . PASS END=220495074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:11,0 chr2 220495961 . A . PASS END=220495983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 220495984 . C . PASS END=220495986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 220495987 . T . PASS END=220495987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:14:10:0,14,332:0,14,255:9,0 chr2 220495988 . G . PASS END=220495992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:12,0 chr2 220495993 . C . PASS END=220495995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 220495996 . T . PASS END=220496001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220496002 . A . PASS END=220496020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,590:0,45,255:19,0 chr2 220496021 . G . PASS END=220496078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,759:0,60,255:26,0 chr2 220496079 . C . PASS END=220496081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 220496082 . C . PASS END=220496082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,969:0,65,255:26,0 chr2 220496083 . G . PASS END=220496095 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,992:0,81,255:29,0 chr2 220496096 . A . PASS END=220496096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:28,0 chr2 220496097 . T . PASS END=220496104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:86:29:0,86,885:0,86,255:29,0 chr2 220496105 . C . PASS END=220496105 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 220496106 . T . PASS END=220496106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1116:0,87,255:29,0 chr2 220496107 . G . PASS END=220496107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 220496108 . G . PASS END=220496108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1086:0,87,255:29,0 chr2 220496109 . A . PASS END=220496109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 220496110 . C . PASS END=220496141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1005:0,80,255:32,0 chr2 220496142 . G . PASS END=220496164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,65,255:26,0 chr2 220496165 . G . PASS END=220496177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:21:0,54,786:0,55,255:19,0 chr2 220496690 . G . PASS END=220496699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,823:0,66,255:22,0 chr2 220496700 . G . PASS END=220496700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 220496701 . G . PASS END=220496712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,831:0,66,255:26,0 chr2 220496713 . G . PASS END=220496716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 220496717 . T . PASS END=220496717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 220496718 . G . PASS END=220496726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 220496727 . C . PASS END=220496753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,931:0,65,255:26,0 chr2 220496754 . G . PASS END=220496762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1033:0,84,255:28,0 chr2 220496763 . G . PASS END=220496767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:25,0 chr2 220496768 . G . PASS END=220496768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:22,0 chr2 220496769 . T . PASS END=220496784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 220496785 . C . PASS END=220496785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,859:0,42,255:20,0 chr2 220496786 . C . PASS END=220496804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,776:0,66,255:22,0 chr2 220496805 . G . PASS END=220496805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220496806 . A . PASS END=220496811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220496812 . A . PASS END=220496812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:19,0 chr2 220496813 . A . PASS END=220496824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:21,0 chr2 220496825 . G . PASS END=220496838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,720:0,47,255:19,0 chr2 220496984 . G . PASS END=220496992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 220496993 . G . PASS END=220497008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr2 220497009 . T . PASS END=220497009 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 220497010 . G . PASS END=220497030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,668:0,54,255:19,0 chr2 220497031 . C . PASS END=220497033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220497034 . C . PASS END=220497036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220497037 . G . PASS END=220497043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220497044 . A . PASS END=220497044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:19,0 chr2 220497045 . C . PASS END=220497053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,737:0,60,255:20,0 chr2 220497054 . G . PASS END=220497054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 220497055 . G . PASS END=220497058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 220497059 . A . PASS END=220497059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 220497060 . A . PASS END=220497061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,746:0,63,255:22,0 chr2 220497062 . T . PASS END=220497062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,668:0,33,255:20,0 chr2 220497063 . T . PASS END=220497065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 220497066 . A . PASS END=220497069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220497070 . G . PASS END=220497082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:22,0 chr2 220497083 . G . PASS END=220497085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:20,0 chr2 220497086 . A . PASS END=220497086 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,705:0,27,255:17,0 chr2 220497087 . C . PASS END=220497096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:20:0,47,737:0,47,255:18,0 chr2 220497097 . G . PASS END=220497097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:17,0 chr2 220497098 . G . PASS END=220497114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:17,0 chr2 220497115 . C . PASS END=220497149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:13,0 chr2 220497150 . G . PASS END=220497164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:24:10:0,24,360:0,30,255:9,0 chr2 220497596 . G . PASS END=220497598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,105,1575:0,108,255:35,0 chr2 220497599 . C . PASS END=220497599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1303:0,72,255:35,0 chr2 220497600 . T . PASS END=220497688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:98:35:0,98,1255:0,98,255:40,0 chr2 220497689 . A . PASS END=220497689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1208:0,72,255:31,0 chr2 220497690 . G . PASS END=220497700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:32:0,84,1260:0,96,255:33,0 chr2 220497701 . G . PASS END=220497709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:24,0 chr2 220497710 . G . PASS END=220497726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:20:0,50,767:0,50,255:19,0 chr2 220497727 . C . PASS END=220497727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 220497728 . A . PASS END=220497731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:20:0,48,720:0,60,255:19,0 chr2 220497996 . C . PASS END=220498001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,1000:0,78,255:26,0 chr2 220498002 . C . PASS END=220498080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:27:0,81,989:0,81,255:33,0 chr2 220498081 . C . PASS END=220498084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1025:0,73,255:24,0 chr2 220498085 . C . PASS END=220498085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:25,0 chr2 220498086 . T . PASS END=220498112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,939:0,75,255:26,0 chr2 220498113 . G . PASS END=220498113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 220498114 . C . PASS END=220498127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:22,0 chr2 220498128 . T . PASS END=220498138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:22:0,54,810:0,66,255:19,0 chr2 220498139 . A . PASS END=220498140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,775:0,60,255:20,0 chr2 220498141 . C . PASS END=220498173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,535:0,42,255:15,0 chr2 220498174 . A . PASS END=220498179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 220498577 . C . PASS END=220498596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,590:0,48,255:19,0 chr2 220498597 . C . PASS END=220498603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:21,0 chr2 220498604 . G . PASS END=220498605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,743:0,47,255:21,0 chr2 220498606 . C . PASS END=220498630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,829:0,66,255:25,0 chr2 220498631 . T . PASS END=220498632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:24,0 chr2 220498633 . A . PASS END=220498638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,931:0,75,255:26,0 chr2 220498639 . G . PASS END=220498641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 220498642 . A . PASS END=220498644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220498645 . G . PASS END=220498679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1119:0,90,255:30,0 chr2 220498680 . G . PASS END=220498685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:25,0 chr2 220498686 . A . PASS END=220498686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1033:0,51,255:24,0 chr2 220498687 . C . PASS END=220498694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:72:25:0,72,1080:0,74,255:25,0 chr2 220498695 . C . PASS END=220498695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 220498696 . T . PASS END=220498698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 220498699 . T . PASS END=220498701 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:24:0,54,810:0,72,255:19,0 chr2 220499142 . G . PASS END=220499149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1025:0,84,255:30,0 chr2 220499150 . C . PASS END=220499150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:29,0 chr2 220499151 . C . PASS END=220499273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:30:0,83,1103:0,83,255:40,0 chr2 220499274 . G . PASS END=220499288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:28:0,66,990:0,73,255:26,0 chr2 220499289 . A . PASS END=220499289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,986:0,53,255:21,0 chr2 220499290 . G . PASS END=220499293 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:22,0 chr2 220499294 . G . PASS END=220499294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 220499295 . G . PASS END=220499323 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,62,255:21,0 chr2 220499324 . A . PASS END=220499326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 220499993 . C . PASS END=220500017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,906:0,61,255:24,0 chr2 220500018 . C . PASS END=220500018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 220500019 . A . PASS END=220500036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:26,0 chr2 220500037 . C . PASS END=220500038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1125:0,90,255:30,0 chr2 220500039 . T . PASS END=220500039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:28,0 chr2 220500040 . A . PASS END=220500047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 220500048 . T . PASS END=220500048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220500049 . C . PASS END=220500057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 220500058 . C . PASS END=220500058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 220500059 . C . PASS END=220500062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 220500063 . A . PASS END=220500063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 220500064 . T . PASS END=220500066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1027:0,87,255:29,0 chr2 220500067 . C . PASS END=220500067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 220500068 . A . PASS END=220500068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:26,0 chr2 220500069 . G . PASS END=220500070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 220500071 . A . PASS END=220500071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 220500072 . T . PASS END=220500137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:30:0,83,1109:0,83,255:33,0 chr2 220500138 . A . PASS END=220500138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1133:0,60,255:29,0 chr2 220500139 . G . PASS END=220500140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:29,0 chr2 220500141 . T . PASS END=220500141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 220500142 . G . PASS END=220500156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1100:0,80,255:29,0 chr2 220500157 . A . PASS END=220500158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 220500159 . A . PASS END=220500165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 220500166 . A . PASS END=220500208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,908:0,61,255:26,0 chr2 220500209 . C . PASS END=220500218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 220500395 . A . PASS END=220500422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:16:0,48,590:0,48,255:18,0 chr2 220500423 . A G, 98.90 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,19,0:1.000,0.000:19:0,11,0:0,8,0:49:137,52,0,237,237,237:255,57,0:0,0:9.8896e+01,4.8896e+01,5.5914e-05,2.3367e+02,2.6844e+02,2.3668e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,8:0,0,7,12:220500423 chr2 220500424 . G . PASS END=220500425 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:19:0,41,665:0,41,255:19,0 chr2 220500426 . A G, 99.41 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 1|1:0,19,0:1.000,0.000:19:0,11,0:0,8,0:49:137,52,0,237,237,237:255,57,0:0,0:9.9408e+01,4.9408e+01,4.9701e-05,2.3418e+02,2.6895e+02,2.3719e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,11,8:0,0,7,12:220500423 chr2 220500427 . A . PASS END=220500447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:19:0,43,660:0,43,255:19,0 chr2 220500448 . C . PASS END=220500457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 220500458 . G . PASS END=220500458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 220500459 . C . PASS END=220500460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 220500461 . C . PASS END=220500461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,764:0,41,255:20,0 chr2 220500462 . G . PASS END=220500466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:24:0,61,862:0,61,255:24,0 chr2 220500467 . T . PASS END=220500467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,807:0,58,255:23,0 chr2 220500468 . T . PASS END=220500469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 220500470 . G . PASS END=220500470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 220500471 . G . PASS END=220500475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 220500476 . T . PASS END=220500477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,851:0,56,255:21,0 chr2 220500478 . G . PASS END=220500478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 220500479 . T . PASS END=220500479 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:21,0 chr2 220500480 . G . PASS END=220500496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 220500497 . G . PASS END=220500497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,784:0,55,255:21,0 chr2 220500498 . G . PASS END=220500512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:24,0 chr2 220500513 . C . PASS END=220500513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,898:0,59,255:21,0 chr2 220500514 . A . PASS END=220500546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:61:24:0,61,848:0,61,255:24,0 chr2 220500547 . G . PASS END=220500547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 220500548 . T . PASS END=220500551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 220500552 . C . PASS END=220500552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 220500553 . G . PASS END=220500572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:24,0 chr2 220500573 . C . PASS END=220500584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:45:22:0,45,675:0,53,255:19,0 chr2 220500585 . C . PASS END=220500592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:34:17:0,34,582:0,34,255:13,0 chr2 220500593 . T . PASS END=220500593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,474:0,28,255:12,0 chr2 220500594 . C . PASS END=220500596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 220500597 . C . PASS END=220500600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 220500601 . G . PASS END=220500601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 220500602 . G . PASS END=220500613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:12,0 chr2 220501024 . G . PASS END=220501024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 220501025 . A . PASS END=220501030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220501031 . G . PASS END=220501114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:28:0,81,1025:0,84,255:35,0 chr2 220501115 . G . PASS END=220501115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1249:0,66,255:33,0 chr2 220501116 . C . PASS END=220501125 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:90:34:0,90,1350:0,102,255:32,0 chr2 220501126 . T . PASS END=220501126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1084:0,55,255:27,0 chr2 220501127 . T . PASS END=220501134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:75:31:0,75,1125:0,93,255:26,0 chr2 220501135 . C . PASS END=220501137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1133:0,80,255:27,0 chr2 220501138 . G . PASS END=220501169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:23:0,60,900:0,69,255:26,0 chr2 220501170 . A . PASS END=220501172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 220501402 . T . PASS END=220501403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:91:36:0,91,1274:0,91,255:36,0 chr2 220501404 . C . PASS END=220501404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:36,0 chr2 220501405 . T . PASS END=220501596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:81:35:0,81,1186:0,88,255:40,0 chr2 220502303 . G . PASS END=220502328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 220502329 . G . PASS END=220502329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 220502330 . T . PASS END=220502350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:16:0,45,568:0,48,255:19,0 chr2 220502351 . C . PASS END=220502352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 220502353 . G . PASS END=220502366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,681:0,41,255:19,0 chr2 220502367 . A C, 104.18 PASS DP=19;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,19,0:1.000,0.000:19:0,5,0:0,14,0:54:142,57,0,737,57,737:255,57,0:0,0:1.0418e+02,5.4185e+01,1.6567e-05,4.5000e+02,8.8955e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,8:0,0,9,10 chr2 220502368 . T . PASS END=220502404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,582:0,48,255:19,0 chr2 220502405 . A . PASS END=220502414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:19:0,49,745:0,49,255:19,0 chr2 220502415 . C . PASS END=220502417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 220502418 . C . PASS END=220502418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,753:0,49,255:20,0 chr2 220502419 . C . PASS END=220502422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:21,0 chr2 220502423 . C . PASS END=220502423 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 220502424 . C . PASS END=220502429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,703:0,63,255:21,0 chr2 220502430 . A . PASS END=220502430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,737:0,47,255:20,0 chr2 220502431 . C . PASS END=220502433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 220502434 . G . PASS END=220502434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 220502435 . C . PASS END=220502441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,808:0,66,255:24,0 chr2 220502442 . C . PASS END=220502442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 220502443 . G . PASS END=220502448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,917:0,75,255:26,0 chr2 220502449 . G . PASS END=220502449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1094:0,87,255:29,0 chr2 220502450 . C . PASS END=220502450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 220502451 . T . PASS END=220502451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,997:0,87,255:29,0 chr2 220502452 . C . PASS END=220502452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:28,0 chr2 220502453 . T . PASS END=220502454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:29:0,87,1035:0,87,255:31,0 chr2 220502455 . A . PASS END=220502455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 220502456 . C . PASS END=220502456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1172:0,93,255:31,0 chr2 220502457 . T . PASS END=220502457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 220502458 . C . PASS END=220502471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:31,0 chr2 220502472 . G . PASS END=220502472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1096:0,65,255:29,0 chr2 220502473 . G . PASS END=220502473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 220502474 . A . PASS END=220502474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:27,0 chr2 220502475 . C . PASS END=220502478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:32:0,84,1260:0,96,255:28,0 chr2 220502479 . C . PASS END=220502480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1019:0,76,255:28,0 chr2 220502481 . T . PASS END=220502483 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 220502484 . T . PASS END=220502484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1041:0,76,255:27,0 chr2 220502485 . A . PASS END=220502485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220502486 . G . PASS END=220502486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,993:0,73,255:26,0 chr2 220502487 . C . PASS END=220502488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 220502489 . T . PASS END=220502491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1031:0,74,255:27,0 chr2 220502492 . T . PASS END=220502493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 220502494 . C . PASS END=220502494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 220502495 . C . PASS END=220502495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220502496 . T . PASS END=220502499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 220502500 . C . PASS END=220502503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220502504 . T . PASS END=220502504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,970:0,67,255:26,0 chr2 220502505 . T . PASS END=220502506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220502507 . A . PASS END=220502509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220502510 . A . PASS END=220502510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,912:0,48,255:24,0 chr2 220502511 . A . PASS END=220502511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 220502512 . C . PASS END=220502512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220502513 . A . PASS END=220502513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 220502514 . G . PASS END=220502514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220502515 . C . PASS END=220502515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 220502516 . C . PASS END=220502520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,942:0,81,255:27,0 chr2 220502521 . C . PASS END=220502533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:26:0,72,1080:0,78,255:26,0 chr2 220502886 . G . PASS END=220502897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:25,0 chr2 220502898 . A . PASS END=220502907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,964:0,81,255:27,0 chr2 220502908 . T . PASS END=220502908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,923:0,64,255:26,0 chr2 220502909 . T . PASS END=220502909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 220502910 . G . PASS END=220502910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 220502911 . G . PASS END=220502914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 220502915 . C . PASS END=220502926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1000:0,78,255:26,0 chr2 220502927 . C . PASS END=220502927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 220502928 . C . PASS END=220502959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:25:0,66,990:0,75,255:26,0 chr2 220502960 . A . PASS END=220502960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 220502961 . G . PASS END=220502963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 220502964 . A . PASS END=220502964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:20,0 chr2 220502965 . C . PASS END=220502967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 220502968 . A . PASS END=220502968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 220502969 . C . PASS END=220502970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 220502971 . C . PASS END=220502975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:21:0,54,810:0,63,255:19,0 chr2 220503425 . A . PASS END=220503449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,498:0,42,255:19,0 chr2 220503450 . C . PASS END=220503481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,723:0,60,255:26,0 chr2 220503482 . A . PASS END=220503513 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1041:0,84,255:30,0 chr2 220503514 . G . PASS END=220503514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 220503515 . C . PASS END=220503531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1094:0,90,255:30,0 chr2 220503532 . A . PASS END=220503532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 220503533 . G . PASS END=220503533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:24,0 chr2 220503534 . C . PASS END=220503569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 220503570 . T . PASS END=220503591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 220504204 . G . PASS END=220504206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,523:0,48,255:16,0 chr2 220504207 . T . PASS END=220504207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,476:0,31,255:15,0 chr2 220504208 . A . PASS END=220504220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,501:0,48,255:16,0 chr2 220504221 . A . PASS END=220504222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 220504223 . G . PASS END=220504233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 220504234 . G . PASS END=220504234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 220504235 . C . PASS END=220504235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 220504236 . T . PASS END=220504237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 220504238 . A . PASS END=220504238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 220504239 . A . PASS END=220504253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,868:0,69,255:24,0 chr2 220504254 . A . PASS END=220504255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 220504256 . C . PASS END=220504271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:26:0,65,969:0,65,255:26,0 chr2 220504272 . T . PASS END=220504272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,925:0,53,255:25,0 chr2 220504273 . T . PASS END=220504275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 220504276 . C . PASS END=220504334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:27:0,81,1039:0,81,255:31,0 chr2 220504335 . G . PASS END=220504376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,726:0,69,255:26,0 chr2 220504377 . C . PASS END=220504377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,853:0,36,255:19,0 chr2 220504378 . C . PASS END=220504394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,861:0,69,255:23,0 chr2 220504395 . A . PASS END=220504396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,814:0,53,255:19,0 chr2 220504397 . C . PASS END=220504399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 220504400 . C . PASS END=220504427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:19:0,42,630:0,57,255:19,0 chr2 220504428 . T . PASS END=220504428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 220504429 . C . PASS END=220504429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 220504430 . A . PASS END=220504452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,450:0,33,255:13,0 chr2 220504453 . C . PASS END=220504457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:10:0,27,405:0,30,255:9,0 chr2 220505152 . G . PASS END=220505164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,808:0,66,255:26,0 chr2 220505165 . C . PASS END=220505227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,986:0,81,255:37,0 chr2 220505228 . G . PASS END=220505264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:95:36:0,95,1333:0,95,255:37,0 chr2 220505265 . T C, 155.35 PASS DP=36;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,36,0:1.000,0.000:36:0,18,0:0,18,0:105:193,108,0,1388,108,1388:255,108,0:0,0:1.5535e+02,1.0535e+02,0.0000e+00,4.5000e+02,1.4012e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,18,18:0,0,12,24 chr2 220505266 . T . PASS END=220505284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:35:0,99,1341:0,105,255:36,0 chr2 220505285 . G . PASS END=220505285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1271:0,67,255:32,0 chr2 220505286 . G . PASS END=220505301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:33:0,81,1215:0,89,255:33,0 chr2 220505302 . A . PASS END=220505302 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:25,0 chr2 220505303 . G . PASS END=220505305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:30:0,63,945:0,90,255:25,0 chr2 220505306 . G . PASS END=220505306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 220505307 . C . PASS END=220505309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:30:0,60,900:0,90,255:20,0 chr2 220505310 . T . PASS END=220505317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:42:23:0,42,630:0,69,255:18,0 chr2 220505318 . C . PASS END=220505318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,698:0,33,255:13,0 chr2 220505319 . A . PASS END=220505321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:21:0,42,630:0,63,255:16,0 chr2 220505511 . G . PASS END=220505523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,613:0,51,255:19,0 chr2 220505524 . G . PASS END=220505525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 220505526 . A . PASS END=220505526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 220505527 . T . PASS END=220505528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,831:0,66,255:22,0 chr2 220505529 . C . PASS END=220505529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 220505530 . A . PASS END=220505537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,878:0,72,255:26,0 chr2 220505538 . A . PASS END=220505538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 220505539 . C . PASS END=220505539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,984:0,65,255:26,0 chr2 220505540 . C . PASS END=220505540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 220505541 . T . PASS END=220505541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 220505542 . G . PASS END=220505542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,931:0,42,255:26,0 chr2 220505543 . C . PASS END=220505544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 220505545 . T . PASS END=220505545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:26,0 chr2 220505546 . C . PASS END=220505553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,1024:0,81,255:28,0 chr2 220505554 . G . PASS END=220505556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 220505557 . G . PASS END=220505587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:31:0,80,1163:0,80,255:36,0 chr2 220505588 . G . PASS END=220505588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1258:0,69,255:34,0 chr2 220505589 . G . PASS END=220505647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1188:0,84,255:34,0 chr2 220505648 . T . PASS END=220505667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,78,255:26,0 chr2 220505668 . A . PASS END=220505684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:19,0 chr2 220506373 . C . PASS END=220506450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:47:0,117,1755:0,125,255:40,0 chr2 222290748 . T . PASS END=222290862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:81:42:0,81,1215:0,104,255:40,0 chr2 222291180 . T . PASS END=222291288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:41:0,120,1800:0,123,255:40,0 chr2 222291289 . A . PASS END=222291289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:69:49:0,69,1517:0,69,255:40,0 chr2 222291290 . C . PASS END=222291328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:82:38:0,82,1291:0,82,255:40,0 chr2 222291329 . C . PASS END=222291339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:63:32:0,63,945:0,69,255:25,0 chr2 222294678 . C . PASS END=222294683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:25,0 chr2 222294684 . C . PASS END=222294699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:27:0,81,972:0,81,255:35,0 chr2 222294700 . T . PASS END=222294700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1164:0,72,255:33,0 chr2 222294701 . C . PASS END=222294770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1234:0,90,255:39,0 chr2 222294771 . C . PASS END=222294771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1178:0,50,255:30,0 chr2 222294772 . T . PASS END=222294783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:35:0,96,1440:0,105,255:37,0 chr2 222294784 . G . PASS END=222294784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:56:37:0,56,1279:0,56,255:32,0 chr2 222294785 . C . PASS END=222294821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:95:37:0,95,1349:0,95,255:38,0 chr2 222294822 . C . PASS END=222294825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:78:37:0,78,1170:0,111,255:26,0 chr2 222294826 . C . PASS END=222294827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:35:0,81,1215:0,105,255:27,0 chr2 222294828 . A . PASS END=222294839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,61,255:24,0 chr2 222294840 . A . PASS END=222294841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:54:24:0,54,810:0,72,255:19,0 chr2 222294842 . C . PASS END=222294845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:20,0 chr2 222294846 . T . PASS END=222294871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:18:0,40,637:0,40,255:19,0 chr2 222298862 . A . PASS END=222299011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:37:0,111,1321:0,111,255:40,0 chr2 222301119 . C . PASS END=222301319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:29:0,84,1064:0,87,255:40,0 chr2 222301320 . A . PASS END=222301328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,107,1496:0,107,255:40,0 chr2 222301781 . C . PASS END=222301842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:55:0,120,1800:0,150,255:40,0 chr2 222307549 . A . PASS END=222307726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:34:0,87,1305:0,98,255:40,0 chr2 222307727 . A . PASS END=222307734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:75:33:0,75,1125:0,99,255:26,0 chr2 222308213 . C . PASS END=222308326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:52:0,120,1800:0,140,255:40,0 chr2 222310843 . C . PASS END=222310901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:115,2:117:99:86:0,120,1800:0,231,255:40,0 chr2 222320267 . C . PASS END=222320378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:96:40:0,96,1374:0,100,255:40,0 chr2 222321333 . C . PASS END=222321334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,946:0,78,255:26,0 chr2 222321335 . G . PASS END=222321335 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 222321336 . T . PASS END=222321336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,937:0,65,255:26,0 chr2 222321337 . G . PASS END=222321337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1000:0,81,255:27,0 chr2 222321338 . T . PASS END=222321348 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:27:0,75,1125:0,81,255:26,0 chr2 222321349 . C . PASS END=222321352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1002:0,81,255:27,0 chr2 222321353 . A . PASS END=222321353 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 222321354 . A . PASS END=222321462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:81:27:0,81,926:0,81,255:40,0 chr2 222321463 . A . PASS END=222321463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:78:42:0,78,1170:0,126,255:26,0 chr2 222321464 . A . PASS END=222321464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:41:0,81,1215:0,123,255:27,0 chr2 222321465 . C . PASS END=222321467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:78:35:0,78,1170:0,105,255:26,0 chr2 222321468 . T . PASS END=222321471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:30:0,81,1215:0,90,255:27,0 chr2 222321472 . A . PASS END=222321488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:62:26:0,62,945:0,62,255:26,0 chr2 222321489 . G . PASS END=222321492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,765:0,50,255:17,0 chr2 222322586 . C . PASS END=222322586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 222322587 . T . PASS END=222322587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:22,0 chr2 222322588 . T . PASS END=222322597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:62:24:0,62,906:0,62,255:26,0 chr2 222322598 . C . PASS END=222322598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 222322599 . T . PASS END=222322599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,902:0,42,255:26,0 chr2 222322600 . T . PASS END=222322600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 222322601 . G . PASS END=222322602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:27:0,68,960:0,68,255:26,0 chr2 222322603 . C . PASS END=222322617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1058:0,84,255:30,0 chr2 222322618 . T . PASS END=222322618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 222322619 . T . PASS END=222322627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1103:0,90,255:32,0 chr2 222322628 . G . PASS END=222322628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1074:0,79,255:31,0 chr2 222322629 . G . PASS END=222322673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:28:0,80,1070:0,80,255:34,0 chr2 222322674 . A . PASS END=222322686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:27:0,71,1016:0,71,255:25,0 chr2 222322687 . G . PASS END=222322687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,833:0,39,255:25,0 chr2 222322688 . G . PASS END=222322697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:25,0 chr2 222322698 . A . PASS END=222322710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:47:20:0,47,729:0,47,255:19,0 chr2 222347072 . C . PASS END=222347164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:84:32:0,84,1324:0,84,255:40,0 chr2 222347165 . A . PASS END=222347201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:38:0,101,1374:0,101,255:40,0 chr2 222347202 . G A, 50.00 PASS DP=41;MQ=250.00;MQRankSum=5.425;ReadPosRankSum=1.668;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:18,23,0:0.561,0.000:41:10,8,0:8,15,0:48:85,0,49,794,644,1437:255,0,255:16,0:5.0000e+01,7.2222e-05,5.1802e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:8,10,12,11:10,8,11,12 chr2 222347203 . G . PASS END=222347239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:90:40:0,90,1457:0,90,255:40,0 chr2 222347240 . C . PASS END=222347410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:91:35:0,91,1266:0,91,255:40,0 chr2 222365737 . G . PASS END=222365892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:87:36:0,87,1234:0,91,255:40,0 chr2 222367248 . T . PASS END=222367280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:84:38:0,84,1235:0,84,255:39,0 chr2 222428451 . C . PASS END=222428453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 222428454 . G . PASS END=222428469 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:26,0 chr2 222428470 . C . PASS END=222428471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1031:0,81,255:27,0 chr2 222428472 . C . PASS END=222428477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:27:0,68,976:0,68,255:26,0 chr2 222428478 . G . PASS END=222428481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 222428482 . A . PASS END=222428482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 222428483 . G . PASS END=222428489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1125:0,93,255:31,0 chr2 222428490 . A . PASS END=222428490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr2 222428491 . T . PASS END=222428497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1113:0,93,255:31,0 chr2 222428498 . T . PASS END=222428499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:29,0 chr2 222428500 . G . PASS END=222428537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:32:0,83,1172:0,83,255:34,0 chr2 222428538 . A . PASS END=222428538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1129:0,63,255:31,0 chr2 222428539 . C . PASS END=222428541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:34:0,85,1111:0,85,255:32,0 chr2 222428542 . T . PASS END=222428542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1184:0,69,255:30,0 chr2 222428543 . T . PASS END=222428546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:96:33:0,96,1440:0,99,255:32,0 chr2 222428547 . G . PASS END=222428547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1078:0,66,255:30,0 chr2 222428548 . C . PASS END=222428549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:32:0,81,1215:0,96,255:28,0 chr2 222428550 . C . PASS END=222428564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:71:28:0,71,1061:0,71,255:26,0 chr2 222428565 . A . PASS END=222428566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 222428567 . T . PASS END=222428580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 222428581 . G . PASS END=222428591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1025:0,84,255:29,0 chr2 222428592 . C . PASS END=222428592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:27,0 chr2 222428593 . C . PASS END=222428593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 222428594 . A . PASS END=222428594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 222428595 . C . PASS END=222428605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1025:0,84,255:31,0 chr2 222428606 . G . PASS END=222428606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1213:0,74,255:30,0 chr2 222428607 . T . PASS END=222428669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1119:0,85,255:34,0 chr2 222428670 . T . PASS END=222428670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 222428671 . A . PASS END=222428959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:90:32:0,90,1218:0,96,255:40,0 chr2 222428960 . A . PASS END=222428960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,2:43:74:43:0,74,1459:0,74,255:37,0 chr2 222428961 . A . PASS END=222429114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:35:0,90,1345:0,104,255:40,0 chr2 222433438 . C . PASS END=222433505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:41:0,107,1450:0,107,255:40,0 chr2 222436878 . C . PASS END=222436884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 222436885 . C . PASS END=222436885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 222436886 . G . PASS END=222436888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,923:0,75,255:25,0 chr2 222436889 . G . PASS END=222436949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:29:0,80,1064:0,80,255:34,0 chr2 222436950 . A . PASS END=222436954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:70:29:0,70,954:0,70,255:26,0 chr2 222436955 . A . PASS END=222436955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 222436956 . A . PASS END=222436956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:26,0 chr2 222436957 . A . PASS END=222436957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 222436958 . A . PASS END=222436958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr2 222436959 . T . PASS END=222436959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 222436960 . C . PASS END=222436968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,939:0,64,255:26,0 chr2 223065893 . T . PASS END=223065907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,1:85:99:77:0,120,1800:0,215,255:40,0 chr2 223065908 . T . PASS END=223065959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:86,0:86:99:78:0,120,1800:0,199,255:40,0 chr2 223066123 . T . PASS END=223066161 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,1:80:99:74:0,120,1800:0,191,255:40,0 chr2 223066462 . G . PASS END=223066462 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 223066498 . C . PASS END=223066498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,3:66:99:66:0,120,1800:0,148,255:40,0 chr2 223066536 . CA C,CAA,CAAA, 49.19 PASS DP=67;MQ=248.94;MQRankSum=6.851;ReadPosRankSum=-0.598;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/2:26,11,21,9,0:0.164,0.313,0.134,0.000:67:15,7,10,5,0:11,4,11,4,0:48:57,128,145,0,87,50,83,223,183,133,85,212,113,237,195:255,0,255:27,59:4.9188e+01,1.2824e+02,1.4789e+02,7.4034e-05,9.4890e+01,5.3000e+01,8.2542e+01,2.3075e+02,1.9125e+02,1.3554e+02,1.1220e+02,2.4629e+02,1.4806e+02,2.7192e+02,2.2461e+02:0.00,8.00,11.00,8.00,16.00,11.00,8.00,16.00,16.00,11.00,34.77,42.77,42.77,42.77,37.77:11,15,24,17:6,20,23,18 chr2 223066538 . A . LowGQ END=223066538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,11:71:0:71:0,0,1740:205,0,255:40,3 chr2 223066560 . G . PASS END=223066560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,4:76:99:76:0,111,2487:0,111,255:40,0 chr2 223066643 . C . PASS END=223066860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:81:33:0,81,1215:0,86,255:40,0 chr2 223066861 . T . PASS END=223066873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:63:27:0,63,945:0,65,255:25,0 chr2 223066874 . A . PASS END=223066881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:23:0,45,675:0,69,255:19,0 chr2 223066882 . C . PASS END=223066897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,604:0,48,255:16,0 chr2 223066898 . G . PASS END=223066907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:14:0,36,540:0,42,255:13,0 chr2 223066908 . A . PASS END=223066908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 223066909 . C . PASS END=223066909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 223066911 . T . PASS END=223066911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 223084859 . C . PASS END=223084880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:14:0,42,504:0,42,255:19,0 chr2 223084881 . A . PASS END=223084895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,685:0,60,255:23,0 chr2 223084896 . G . PASS END=223085055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:30:0,81,1099:0,85,255:40,0 chr2 223085056 . T . PASS END=223085056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1208:0,50,255:25,0 chr2 223085057 . G . PASS END=223085057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:35:0,81,1215:0,105,255:27,0 chr2 223085058 . C . PASS END=223085065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:66:28:0,66,990:0,84,255:25,0 chr2 223085066 . T . PASS END=223085066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,992:0,45,255:22,0 chr2 223085067 . G . PASS END=223085073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:23,0 chr2 223085932 . C . PASS END=223085932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 223085935 . C . PASS END=223085935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1070:0,87,255:29,0 chr2 223085941 . C . PASS END=223085941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1194:0,93,255:31,0 chr2 223085942 . T . PASS END=223085942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:30,0 chr2 223085943 . T . PASS END=223086049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:86:31:0,86,1113:0,86,255:40,0 chr2 223086050 . C . PASS END=223086050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1218:0,63,255:31,0 chr2 223086051 . A . PASS END=223086058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:85:33:0,85,1158:0,85,255:33,0 chr2 223086059 . G . PASS END=223086079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:27:0,63,945:0,81,255:26,0 chr2 223086080 . T . PASS END=223086090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:45:21:0,45,675:0,63,255:17,0 chr2 223086091 . G . PASS END=223086106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:12,0 chr2 223096797 . C . PASS END=223096801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:37:0,111,1352:0,111,255:38,0 chr2 223096802 . C . PASS END=223096802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,2:38:59:38:0,59,1310:0,59,255:36,0 chr2 223096803 . T . PASS END=223096974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:35:0,84,1260:0,104,255:40,0 chr2 223096975 . G . PASS END=223096988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:25:0,60,900:0,73,255:25,0 chr2 223096989 . T . PASS END=223097002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:18:0,48,720:0,54,255:17,0 chr2 223158442 . T . PASS END=223158476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:62:0,120,1800:0,156,255:40,0 chr2 223158824 . T . PASS END=223158837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 223158838 . C . PASS END=223158849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 223158850 . C . PASS END=223158866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,823:0,66,255:22,0 chr2 223158867 . C . PASS END=223158867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 223158868 . C . PASS END=223158887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,831:0,66,255:25,0 chr2 223158888 . C . PASS END=223158889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:27,0 chr2 223158890 . C . PASS END=223158890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 223158891 . T . PASS END=223158891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,953:0,42,255:25,0 chr2 223158892 . C . PASS END=223158902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:27:0,72,1080:0,74,255:26,0 chr2 223158903 . C . PASS END=223158903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:26,0 chr2 223158904 . C . PASS END=223158904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 223158905 . G . PASS END=223158911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1078:0,84,255:28,0 chr2 223158912 . C . PASS END=223158913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,887:0,67,255:26,0 chr2 223158914 . G . PASS END=223158938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1003:0,84,255:30,0 chr2 223158939 . T . PASS END=223158939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1107:0,77,255:29,0 chr2 223158940 . C . PASS END=223158947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 223158948 . T . PASS END=223158948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,987:0,51,255:27,0 chr2 223158949 . T . PASS END=223158949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 223158950 . C . PASS END=223158956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:28:0,78,1170:0,84,255:26,0 chr2 223158957 . A . PASS END=223158957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,937:0,51,255:24,0 chr2 223158958 . A . PASS END=223158979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,890:0,62,255:26,0 chr2 223158980 . T . PASS END=223158980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,764:0,36,255:23,0 chr2 223158981 . T . PASS END=223158982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 223158983 . C . PASS END=223158983 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 223158984 . C . PASS END=223158991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:24,0 chr2 223158992 . A . PASS END=223158992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,762:0,42,255:22,0 chr2 223158993 . C . PASS END=223158997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:23,0 chr2 223158998 . C . PASS END=223158998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:21,0 chr2 223158999 . A . PASS END=223159010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 223159011 . A . PASS END=223159020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,765:0,50,255:18,0 chr2 223159029 . G . PASS END=223159029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 223160247 . C . PASS END=223160367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:45:0,120,1800:0,133,255:40,0 chr2 223160368 . T . PASS END=223160376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:43:0,99,1512:0,99,255:40,0 chr2 223161697 . C . PASS END=223161698 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 223161699 . T . PASS END=223161699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 223161700 . G . PASS END=223161711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,451:0,39,255:13,0 chr2 223161712 . G . PASS END=223161713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:12,0 chr2 223161714 . C . PASS END=223161729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,488:0,39,255:13,0 chr2 223161730 . T . PASS END=223161732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 223161733 . G . PASS END=223161739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 223161740 . G . PASS END=223161763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:16,0 chr2 223161764 . T . LowGQ END=223161764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:0:16:0,0,480:7,0,255:14,0 chr2 223161765 . T . PASS END=223161817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,580:0,48,255:17,0 chr2 223161818 . A . PASS END=223161818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:14,0 chr2 223161819 . T . PASS END=223161833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:17,0 chr2 223161834 . T . PASS END=223161834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:14,0 chr2 223161835 . C . PASS END=223161851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:17:0,40,629:0,40,255:17,0 chr2 223161852 . G . PASS END=223161852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,643:0,51,255:17,0 chr2 223161853 . G . PASS END=223161853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:16,0 chr2 223161854 . A . PASS END=223161881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:18,0 chr2 223161882 . T . PASS END=223161885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 223161886 . A . PASS END=223161888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 223161889 . A G, 91.69 PASS DP=15;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,15,0:1.000,0.000:15:0,9,0:0,6,0:42:129,45,0,552,45,552:255,45,0:0,0:9.1686e+01,4.1686e+01,2.9459e-04,4.5000e+02,7.6456e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,5,10:0,0,9,6 chr2 223161890 . C . PASS END=223161907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 223161908 . C . PASS END=223161908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 223161909 . G . PASS END=223161910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 223161911 . C . PASS END=223161911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 223161912 . C . PASS END=223161913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 223161914 . T . PASS END=223161914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 223161915 . G . PASS END=223161920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,504:0,42,255:14,0 chr2 223161921 . G . PASS END=223161926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:14:0,30,450:0,42,255:13,0 chr2 223161927 . T . PASS END=223161932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr2 223161934 . T . PASS END=223161934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 223163247 . T . PASS END=223163247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,884:0,69,255:23,0 chr2 223163250 . C . PASS END=223163265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr2 223163266 . G . PASS END=223163266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 223163267 . C . PASS END=223163283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:22:0,66,791:0,66,255:26,0 chr2 223163284 . C . PASS END=223163286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 223163287 . C . PASS END=223163287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 223163288 . G . PASS END=223163294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,994:0,81,255:27,0 chr2 223163295 . G . PASS END=223163297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 223163298 . G . PASS END=223163298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 223163299 . C . PASS END=223163300 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,963:0,67,255:26,0 chr2 223163301 . T . PASS END=223163327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1131:0,83,255:32,0 chr2 223163328 . T . PASS END=223163329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 223163330 . G . PASS END=223163330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 223163331 . T . PASS END=223163333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 223163334 . T . PASS END=223163334 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 223163433 . G . PASS END=223163433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 223163490 . G . PASS END=223163490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 223163582 . T . PASS END=223163582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,288:0,24,255:8,0 chr2 223168622 . A . PASS END=223168627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:33:0,86,1233:0,86,255:34,0 chr2 223168628 . G . PASS END=223168628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1226:0,71,255:33,0 chr2 223168629 . A . PASS END=223169065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:34:0,81,1202:0,81,255:40,0 chr2 223169066 . A . PASS END=223169066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,3:49:75:49:0,75,1433:0,75,255:40,0 chr2 223169067 . G . PASS END=223169092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:84:41:0,84,1375:0,84,255:40,0 chr2 223169093 . G . PASS END=223169093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1221:0,73,255:33,0 chr2 223169094 . A . PASS END=223169099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:41:0,84,1283:0,84,255:35,0 chr2 223169100 . A . PASS END=223169100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,3:42:76:42:0,76,1356:0,76,255:31,0 chr2 223169101 . T . PASS END=223169101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:90:41:0,90,1243:0,90,255:32,0 chr2 223169102 . T . PASS END=223169102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:70:40:0,70,1159:0,70,255:32,0 chr2 223169103 . T . PASS END=223169106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,99,1485:0,103,255:33,0 chr2 223169107 . A . PASS END=223169107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:65:40:0,65,1265:0,65,255:31,0 chr2 223169108 . A . PASS END=223169111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:38:0,81,1181:0,81,255:33,0 chr2 223169112 . A . PASS END=223169112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,5:38:31:38:0,31,1066:0,31,255:30,0 chr2 223169113 . A . PASS END=223169113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:98:38:0,98,1348:0,98,255:34,0 chr2 223289322 . A . PASS END=223289355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:7,0 chr2 223289356 . A . PASS END=223289361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,241:6,0 chr2 223289362 . T . PASS END=223289362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:6,1:7:4:7:0,4,194:0,4,194:5,0 chr2 223289363 . C . PASS END=223289364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,255:6,0 chr2 223289365 . C . PASS END=223289367 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:7:0,21,271:0,21,255:7,0 chr2 223289368 . G . PASS END=223289374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:18:7:0,18,270:0,21,249:6,0 chr2 223289375 . G . PASS END=223289396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:21:7:0,21,249:0,21,249:9,0 chr2 223289397 . G . PASS END=223289399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 223289400 . C . PASS END=223289401 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 223289402 . G . PASS END=223289438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,336:0,30,255:12,0 chr2 223289439 . G . PASS END=223289449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:15,0 chr2 223289450 . G . PASS END=223289450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 223289451 . C . PASS END=223289451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,512:0,14,255:13,0 chr2 223289452 . G . PASS END=223289460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 223289461 . G . PASS END=223289502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,498:0,42,255:16,0 chr2 223289503 . C . PASS END=223289503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 223289504 . T . PASS END=223289511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 223289512 . A . PASS END=223289524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:14:0,30,450:0,42,255:13,0 chr2 223289525 . A . PASS END=223289525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,388:0,19,255:9,0 chr2 223289526 . G . PASS END=223289529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 223289530 . C . PASS END=223289536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:21:10:0,21,315:0,30,255:8,0 chr2 223289537 . G . PASS END=223289540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:14:10:0,14,270:0,14,255:6,0 chr2 223339287 . G . PASS END=223339445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:44:0,105,1575:0,108,255:40,0 chr2 223386486 . T . PASS END=223386486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,429:0,28,255:14,0 chr2 223386487 . T . PASS END=223386493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,529:0,45,255:19,0 chr2 223386494 . G . PASS END=223386507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:22,0 chr2 223386508 . T . PASS END=223386508 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 223386509 . G . PASS END=223386511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:26:0,62,945:0,62,255:26,0 chr2 223386512 . C . PASS END=223386519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,964:0,81,255:29,0 chr2 223386520 . T . PASS END=223386520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:28,0 chr2 223386521 . C . PASS END=223386533 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:29:0,80,1086:0,80,255:31,0 chr2 223386534 . C . PASS END=223386534 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1111:0,57,255:29,0 chr2 223386535 . G . PASS END=223386596 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:30:0,80,1133:0,80,255:32,0 chr2 223386597 . T . PASS END=223386599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 223386600 . A . PASS END=223386601 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 223386602 . C . PASS END=223386604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 223386605 . C . PASS END=223386616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1078:0,84,255:28,0 chr2 223386617 . C . PASS END=223386626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:28:0,63,945:0,84,255:25,0 chr2 223386627 . G . PASS END=223386648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,43,255:18,0 chr2 223386649 . C . PASS END=223386657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:14:0,30,450:0,42,255:13,0 chr2 223386658 . G . PASS END=223386658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:27:14:0,27,405:0,42,255:9,0 chr2 223386659 . A . PASS END=223386664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:13:0,30,450:0,39,255:10,0 chr2 223386665 . G . PASS END=223386665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:9,0 chr2 223389663 . T . PASS END=223389752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:94:41:0,94,1575:0,94,255:40,0 chr2 223423066 . G . PASS END=223423069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:34:0,86,1193:0,86,255:35,0 chr2 223423070 . T . PASS END=223423070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1263:0,75,255:34,0 chr2 223423071 . G . PASS END=223423324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:88:37:0,88,1296:0,88,255:40,0 chr2 223423325 . C . PASS END=223423361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,99,1443:0,99,255:40,0 chr2 223423362 . A G, 178.50 PASS DP=44;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,44,0:1.000,0.000:44:0,25,0:0,19,0:128:216,132,0,316,316,316:255,132,0:0,0:1.7850e+02,1.2850e+02,0.0000e+00,3.1327e+02,3.4804e+02,3.1628e+02:0.00,34.77,37.78,34.77,69.54,37.78:0,0,19,25:0,0,26,18 chr2 223423363 . C . PASS END=223423399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:97:38:0,97,1305:0,97,255:38,0 chr2 223423400 . T . PASS END=223423506 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1147:0,80,255:40,0 chr2 223423507 . A . PASS END=223423507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1041:0,73,255:27,0 chr2 223423508 . G . PASS END=223423509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 223423510 . C . PASS END=223423511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1080:0,54,255:27,0 chr2 223423512 . G . PASS END=223423514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 223423515 . A . PASS END=223423515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,978:0,70,255:26,0 chr2 223423516 . C . PASS END=223423519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 223423520 . A . PASS END=223423520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:26,0 chr2 223423521 . G . PASS END=223423524 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 223423525 . G . PASS END=223423525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1045:0,71,255:27,0 chr2 223423526 . A . PASS END=223423526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 223423527 . A . PASS END=223423531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:28:0,70,986:0,70,255:27,0 chr2 223423532 . C . PASS END=223423539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 223423540 . T . PASS END=223423540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,849:0,67,255:27,0 chr2 223423541 . T . PASS END=223423543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 223423544 . T . PASS END=223423555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,1022:0,68,255:26,0 chr2 223423556 . C . PASS END=223423556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 223423557 . T . PASS END=223423557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,994:0,70,255:26,0 chr2 223423558 . G . PASS END=223423558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 223423559 . T . PASS END=223423577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:24:0,62,857:0,62,255:26,0 chr2 223423578 . C . PASS END=223423578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 223423579 . T . PASS END=223423587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 223423588 . A . PASS END=223423610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:40:18:0,40,630:0,40,255:19,0 chr2 223423611 . A . PASS END=223423617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:15:0,30,450:0,45,255:13,0 chr2 223436590 . T . PASS END=223436606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:31:0,90,1112:0,93,255:34,0 chr2 223436607 . C T, 148.87 PASS DP=34;MQ=247.11;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,34,0:1.000,0.000:34:0,20,0:0,14,0:99:187,102,0,1273,102,1273:255,102,0:0,0:1.4887e+02,9.8865e+01,0.0000e+00,4.5000e+02,1.3364e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,15,19:0,0,15,19 chr2 223436608 . A . PASS END=223436644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:85:34:0,85,1119:0,85,255:40,0 chr2 223436645 . A . PASS END=223436707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:40:0,99,1485:0,120,255:40,0 chr2 223436708 . A . PASS END=223436708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1363:0,73,255:31,0 chr2 223436709 . T . PASS END=223436726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:33,0 chr2 223436727 . G . PASS END=223436741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:26:0,69,1035:0,78,255:25,0 chr2 223464647 . C . PASS END=223464797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:31:0,80,1185:0,80,255:40,0 chr2 223464798 . T . PASS END=223464799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 223464800 . C . PASS END=223464801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 223464802 . T . PASS END=223464802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1040:0,76,255:27,0 chr2 223478530 . C . PASS END=223478530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1074:0,93,255:31,0 chr2 223478531 . T . PASS END=223478531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 223478532 . G . PASS END=223478647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:30:0,81,1215:0,83,255:40,0 chr2 223484364 . C . PASS END=223484456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:59:0,114,1710:0,140,255:40,0 chr2 223488369 . C . PASS END=223488449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:36:0,102,1313:0,108,255:40,0 chr2 223488991 . T . PASS END=223489198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:47:0,103,1692:0,103,255:40,0 chr2 223489433 . C . PASS END=223489494 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:96,0:96:99:86:0,120,1800:0,195,255:40,0 chr2 223493556 . T . PASS END=223493607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,1:71:99:62:0,120,1800:0,170,255:40,1 chr2 223494831 . C . PASS END=223494893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,0:92:99:77:0,120,1800:0,217,255:40,0 chr2 223496323 . C . PASS END=223496393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:104,0:104:99:91:0,120,1800:0,235,255:40,0 chr2 223497918 . C . PASS END=223497939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:60:0,120,1800:0,150,255:40,0 chr2 223497940 . A . PASS END=223497976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,1:76:99:71:0,120,1800:0,156,255:40,0 chr2 223497977 . A G, 49.90 PASS DP=69;MQ=248.85;MQRankSum=6.277;ReadPosRankSum=1.063;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:36,33,0:0.478,0.000:69:16,15,0:20,18,0:47:85,0,47,185,185,185:255,0,255:29,0:4.9903e+01,8.7754e-05,5.0000e+01,1.8467e+02,2.1944e+02,1.8768e+02:0.00,34.77,37.78,34.77,69.54,37.78:26,10,25,8:20,16,17,16 chr2 223497978 . G . PASS END=223498003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,2:63:99:56:0,111,1800:0,111,255:40,0 chr2 223498004 . T . PASS END=223498004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,4:55:54:55:0,54,1551:0,54,255:40,0 chr2 223498005 . A . PASS END=223498026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:49:0,107,1573:0,107,255:40,0 chr2 223499110 . C . PASS END=223499110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 223499111 . T . PASS END=223499112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:26:0,68,941:0,68,255:27,0 chr2 223499113 . G . PASS END=223499114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1158:0,96,255:32,0 chr2 223499115 . A . PASS END=223499260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:96:32:0,96,1172:0,96,255:40,0 chr2 223504299 . C . PASS END=223504414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:42:0,114,1710:0,126,255:40,0 chr2 223505581 . C . PASS END=223505650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:97,1:98:99:74:0,120,1800:0,209,255:40,0 chr2 223507570 . C . PASS END=223507574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:25,0 chr2 223507575 . T . PASS END=223507575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,809:0,36,255:24,0 chr2 223507576 . T . PASS END=223507576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 223507577 . T . PASS END=223507577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,860:0,59,255:23,0 chr2 223507578 . G . PASS END=223507580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:24,0 chr2 223507581 . G . PASS END=223507724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:83:33:0,83,1164:0,83,255:40,0 chr2 223513459 . A . PASS END=223513514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:119,0:119:99:107:0,120,1800:0,255,255:40,0 chr2 223520735 . T . PASS END=223520744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 223520745 . G . PASS END=223520749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,815:0,66,255:22,0 chr2 223520750 . G . PASS END=223520750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 223520751 . G . PASS END=223520757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,870:0,69,255:25,0 chr2 223520758 . A . PASS END=223520758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 223520759 . A . PASS END=223520762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,840:0,75,255:25,0 chr2 223520763 . C . PASS END=223520763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 223520764 . A . PASS END=223520766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 223520767 . T . PASS END=223520767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:23,0 chr2 223520768 . C . PASS END=223520776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:26,0 chr2 223520777 . C . PASS END=223520783 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 223520784 . A . PASS END=223520784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,947:0,67,255:26,0 chr2 223520785 . G . PASS END=223520786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 223520787 . C . PASS END=223520792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:26,0 chr2 223536505 . A . PASS END=223536514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,364:0,30,255:12,0 chr2 223536515 . A . PASS END=223536515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 223536516 . G . PASS END=223536516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,463:0,12,255:13,0 chr2 223536517 . T . PASS END=223536545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,499:0,45,255:16,0 chr2 223536546 . G . PASS END=223536556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:33:16:0,33,495:0,48,255:13,0 chr2 223536557 . C . PASS END=223536567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:14,0 chr2 223536568 . C . PASS END=223536576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 223536577 . G . PASS END=223536577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 223536578 . T . PASS END=223536586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 223536587 . A . PASS END=223536587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,441:0,25,255:10,0 chr2 223536588 . C . PASS END=223536598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,418:0,33,255:11,0 chr2 223553063 . G . PASS END=223553227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:85:32:0,85,1083:0,85,255:40,0 chr2 223553228 . A . PASS END=223553228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:52:34:0,52,1039:0,52,255:26,0 chr2 223553229 . T . PASS END=223553234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1164:0,85,255:29,0 chr2 223553235 . A . PASS END=223553236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1011:0,73,255:27,0 chr2 223553237 . T . PASS END=223553237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 223553238 . T . PASS END=223553241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:23,0 chr2 223553984 . C . PASS END=223553999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1133:0,80,255:32,0 chr2 223554000 . A . PASS END=223554000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,3:34:30:34:0,30,1003:0,30,255:30,0 chr2 223554001 . T . PASS END=223554011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:86:34:0,86,1225:0,86,255:36,0 chr2 223554012 . G . PASS END=223554012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1284:0,78,255:34,0 chr2 223554013 . T . PASS END=223554021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:37:0,108,1460:0,109,255:40,0 chr2 223554022 . T . PASS END=223554022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:79:42:0,79,1465:0,79,255:40,0 chr2 223554023 . A . PASS END=223554188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:87:42:0,87,1305:0,112,255:40,0 chr2 223559081 . G . PASS END=223559111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:23:0,69,853:0,69,255:25,0 chr2 223559112 . C . PASS END=223559112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 223559113 . T . PASS END=223559121 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:25:0,65,984:0,65,255:26,0 chr2 223559122 . A . PASS END=223559185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:80:28:0,80,1011:0,80,255:40,0 chr2 223559186 . C . PASS END=223559186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:36,0 chr2 223559187 . T . PASS END=223559224 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:31:0,84,1181:0,93,255:36,0 chr2 223559225 . A . PASS END=223559225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1102:0,77,255:26,0 chr2 223559226 . A . PASS END=223559227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 223559228 . G . PASS END=223559230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:30:0,78,1170:0,90,255:26,0 chr2 223559231 . T . PASS END=223559239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 223559240 . T . PASS END=223559255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,984:0,65,255:24,0 chr2 223559808 . C . PASS END=223559809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,925:0,75,255:26,0 chr2 223559810 . C . PASS END=223559999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:81:27:0,81,999:0,81,255:40,1 chr2 223560000 . C . PASS END=223560007 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:63:35:0,63,945:0,105,255:26,0 chr2 223574455 . T . PASS END=223574583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:84:35:0,84,1175:0,85,255:40,0 chr2 223574584 . A . PASS END=223574608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:25:0,63,945:0,75,255:26,0 chr2 223574609 . A . PASS END=223574609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 223773491 . A . PASS END=223773868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:51:0,120,1800:0,133,255:40,0 chr2 223781037 . G . PASS END=223781040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 223781041 . T . PASS END=223781042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,770:0,55,255:23,0 chr2 223781043 . C . PASS END=223781045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,833:0,72,255:24,0 chr2 223781046 . G . PASS END=223781046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:24,0 chr2 223781047 . G . PASS END=223781047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,850:0,75,255:25,0 chr2 223781048 . A . PASS END=223781048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:24,0 chr2 223781049 . C . PASS END=223781049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,961:0,75,255:25,0 chr2 223781050 . A . PASS END=223781050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:24,0 chr2 223781051 . G . PASS END=223781051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1082:0,93,255:31,0 chr2 223781052 . T . PASS END=223781052 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 223781053 . A . PASS END=223781063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:89:33:0,89,1130:0,89,255:33,0 chr2 223781064 . T . PASS END=223781186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:80:33:0,80,1327:0,80,255:40,0 chr2 223781187 . C . PASS END=223781214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 223782764 . T . PASS END=223782873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:42:0,106,1800:0,106,255:40,0 chr2 223783782 . G . PASS END=223783797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:51:18:0,51,599:0,54,255:19,0 chr2 223783798 . T . PASS END=223783817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,731:0,63,255:25,0 chr2 223783818 . A . PASS END=223783818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:20:25:0,20,828:0,20,255:23,0 chr2 223783819 . T . PASS END=223783827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:64:26:0,64,923:0,64,255:26,0 chr2 223783828 . A . PASS END=223783829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 223783830 . G . PASS END=223783830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 223783831 . G . PASS END=223783832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 223783833 . A . PASS END=223783839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 223783840 . C . PASS END=223783872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:27:0,80,1017:0,80,255:32,0 chr2 223783873 . T . PASS END=223783878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:78:30:0,78,1170:0,90,255:26,0 chr2 223783879 . C . PASS END=223783879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 223783880 . C . PASS END=223783889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:27:0,69,1035:0,81,255:26,0 chr2 223783890 . G . PASS END=223783890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,955:0,50,255:22,0 chr2 223783891 . T . PASS END=223783899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:24:0,60,900:0,72,255:20,0 chr2 223783900 . T . PASS END=223783920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,712:0,44,255:19,0 chr2 223785998 . A . PASS END=223786148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,1:54:99:41:0,109,1311:0,109,255:40,0 chr2 223787426 . A . PASS END=223787521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:39:0,117,1443:0,117,255:40,0 chr2 223787522 . C . PASS END=223787549 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:83:31:0,83,1202:0,83,255:39,0 chr2 223787796 . T . PASS END=223787867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:65:0,120,1800:0,157,255:40,0 chr2 223789174 . G . PASS END=223789313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:52:0,102,1530:0,149,255:40,0 chr2 223791735 . C . PASS END=223791735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:17,0 chr2 223791736 . T . PASS END=223791736 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,646:0,57,255:19,0 chr2 223791737 . T . PASS END=223791770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr2 223791771 . A . PASS END=223791776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:27,0 chr2 223791777 . T . PASS END=223791777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 223791778 . C . PASS END=223791897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:28:0,81,1215:0,83,255:40,0 chr2 223791898 . A . PASS END=223791901 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:26,0 chr2 223791902 . C . PASS END=223791902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 223791903 . C . PASS END=223791903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:26,0 chr2 223791904 . G . PASS END=223791905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 223791906 . A . PASS END=223791907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1053:0,71,255:26,0 chr2 223793580 . T . PASS END=223793654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:57:0,120,1800:0,161,255:40,0 chr2 223795339 . G . PASS END=223795490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,1:60:86:34:0,86,1210:0,86,255:40,0 chr2 223795491 . A . PASS END=223795491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,3:44:60:44:0,60,1382:0,60,255:34,0 chr2 223795492 . T . PASS END=223795499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:91:35:0,91,1102:0,91,255:36,0 chr2 223795500 . T . PASS END=223795500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,3:36:58:36:0,58,1026:0,58,255:28,0 chr2 223795501 . T . PASS END=223795511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:32:0,81,1208:0,83,255:31,0 chr2 223795512 . G . PASS END=223795516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:69:32:0,69,1035:0,96,255:23,0 chr2 223795517 . C . PASS END=223795520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,83,255:27,0 chr2 223795521 . A . PASS END=223795530 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:72:28:0,72,1080:0,84,255:26,0 chr2 223797884 . A . PASS END=223797998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:53:0,120,1800:0,159,255:40,0 chr2 223799248 . T . PASS END=223799405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:29:0,87,1003:0,87,255:40,1 chr2 223806215 . C . PASS END=223806236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:34:0,81,1151:0,81,255:37,0 chr2 223806237 . T . PASS END=223806371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:80:31:0,80,1133:0,80,255:40,1 chr2 223806372 . A . PASS END=223806372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 223916863 . A . PASS END=223916987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:32:0,84,1260:0,92,255:40,0 chr2 223916988 . C . PASS END=223916992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 223917526 . C . PASS END=223917540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:14,0 chr2 223917541 . C . PASS END=223917551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 223917552 . C . PASS END=223917568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:17,0 chr2 223917569 . G . PASS END=223917570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 223917571 . A . PASS END=223917573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 223917574 . G . PASS END=223917575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 223917576 . A . PASS END=223917580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 223917581 . C . PASS END=223917591 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,737:0,60,255:20,0 chr2 223917592 . C . PASS END=223917597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr2 223917598 . C . PASS END=223917598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:22,0 chr2 223917599 . C . PASS END=223917609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,864:0,72,255:24,0 chr2 223917610 . T . PASS END=223917610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:20,0 chr2 223917611 . G . PASS END=223917614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 223917615 . T . PASS END=223917615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:21,0 chr2 223917616 . C . PASS END=223917616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,837:0,69,255:23,0 chr2 223917617 . C . PASS END=223917617 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 223917618 . C . PASS END=223917628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,870:0,72,255:25,0 chr2 223917629 . C T, 125.25 PASS DP=26;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,26,0:1.000,0.000:26:0,14,0:0,12,0:75:163,78,0,992,78,992:255,78,0:0,0:1.2525e+02,7.5247e+01,2.5886e-07,4.5000e+02,1.1002e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,19,7:0,0,13,13 chr2 223917630 . G . PASS END=223917640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:26:0,66,990:0,78,255:25,0 chr2 223917641 . C . PASS END=223917641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:24,0 chr2 223917642 . A . PASS END=223917649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:64:27:0,64,923:0,64,255:26,0 chr2 223917650 . C . PASS END=223917650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,917:0,50,255:26,0 chr2 223917651 . G . PASS END=223917651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1108:0,87,255:29,0 chr2 223917652 . A . PASS END=223917652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1015:0,71,255:28,0 chr2 223917653 . G . PASS END=223917666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:87:29:0,87,1094:0,87,255:36,0 chr2 223917667 . T . PASS END=223917712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:31:0,84,1241:0,86,255:36,0 chr2 223917713 . G . PASS END=223917713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:26,0 chr2 223917714 . G . PASS END=223917718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 223917719 . C . PASS END=223917720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 223917721 . T . PASS END=223917721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,978:0,48,255:25,0 chr2 223917722 . G . PASS END=223917763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:25:0,60,900:0,68,255:26,0 chr2 223917764 . G . PASS END=223917764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,876:0,36,255:21,0 chr2 223917765 . T . PASS END=223917767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:22,0 chr2 223917768 . A . PASS END=223917768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 223917769 . A . PASS END=223917774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,900:0,66,255:20,0 chr2 223917775 . A . PASS END=223917778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,759:0,60,255:20,0 chr2 223917779 . G . PASS END=223917792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,690:0,44,255:19,0 chr2 223917793 . A . PASS END=223917793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,612:0,37,255:15,0 chr2 223917794 . G . PASS END=223917794 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 223917795 . G . PASS END=223917795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 223917796 . C . PASS END=223917797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 223917798 . A . PASS END=223917798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 223917799 . T . PASS END=223917811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:15,0 chr2 223917812 . T C, 95.15 PASS DP=16;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,16,0:1.000,0.000:16:0,6,0:0,10,0:45:133,48,0,612,48,612:255,48,0:0,0:9.5153e+01,4.5153e+01,1.3254e-04,4.5000e+02,7.9923e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,2,14:0,0,10,6 chr2 223917813 . G . PASS END=223917832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,590:0,48,255:16,0 chr2 223917833 . G . PASS END=223917833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 223917834 . G . PASS END=223917835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 223917836 . G . PASS END=223917836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 223917837 . C . PASS END=223917837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 223917838 . A . PASS END=223917838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,510:0,15,255:13,0 chr2 223917839 . G . PASS END=223917849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,521:0,45,255:15,0 chr2 223917850 . T . PASS END=223917850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,582:0,45,255:15,0 chr2 223917851 . G . PASS END=223917851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 223917852 . C . PASS END=223917878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,507:0,45,255:18,0 chr2 223917879 . C . PASS END=223917879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 223917880 . C . PASS END=223917881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 223917882 . G . PASS END=223917883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,729:0,60,255:20,0 chr2 223917884 . G . PASS END=223917886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:39:20:0,39,585:0,44,255:13,0 chr2 223917887 . G . PASS END=223917906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,559:0,45,255:16,0 chr2 223917907 . T . PASS END=223917909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 223917910 . A . PASS END=223917913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 223917914 . G . PASS END=223917914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:13,0 chr2 223917915 . G . PASS END=223917916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 223917917 . C . PASS END=223917917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 223917918 . A . PASS END=223917918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 223917919 . G . PASS END=223917919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,518:0,29,255:14,0 chr2 223917920 . C . PASS END=223917920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,482:0,14,255:14,0 chr2 223917921 . G . PASS END=223917921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,504:0,6,255:14,0 chr2 223917922 . T . PASS END=223917932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,551:0,45,255:16,0 chr2 223917933 . T . PASS END=223917933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,527:0,31,255:15,0 chr2 223917934 . C . PASS END=223917935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,576:0,48,255:16,0 chr2 223917936 . T . PASS END=223917936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 223917937 . C . PASS END=223917940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 223917941 . C . PASS END=223917941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:16,0 chr2 223917942 . C . PASS END=223917945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:18,0 chr2 223917946 . A . PASS END=223917959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:18:0,41,681:0,41,255:19,0 chr2 223917960 . A . PASS END=223917963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,693:0,60,255:20,0 chr2 223917964 . A . PASS END=223917964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,540:0,21,255:19,0 chr2 223917965 . G . PASS END=223917967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:20,0 chr2 223917968 . G . PASS END=223917977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 223917978 . G . PASS END=223917982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 223917983 . T G, 107.19 PASS DP=20;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,20,0:1.000,0.000:20:0,13,0:0,7,0:57:145,60,0,775,60,775:255,60,0:0,0:1.0719e+02,5.7194e+01,8.2835e-06,4.5000e+02,9.1964e+01,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,11,9:0,0,12,8 chr2 223917984 . G . PASS END=223917990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,709:0,60,255:20,0 chr2 223917991 . A . PASS END=223917996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:49:20:0,49,753:0,49,255:20,0 chr2 223917997 . C . PASS END=223917998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 223917999 . T . PASS END=223918013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,712:0,44,255:18,0 chr2 223918014 . A . PASS END=223918014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:15,0 chr2 223918015 . A . PASS END=223918015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 223918016 . C . PASS END=223918016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:15,0 chr2 223918017 . G . PASS END=223918020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 223918021 . G . PASS END=223918027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:16,0 chr2 223918028 . A . PASS END=223918032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,520:0,31,255:13,0 chr2 223918033 . C . PASS END=223918033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 223918034 . C . PASS END=223918035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 223918036 . C . PASS END=223918042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:15,0 chr2 223918043 . C . PASS END=223918055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,535:0,45,255:15,0 chr2 223918056 . T . PASS END=223918061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 224462147 . T . PASS END=224463059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:82:36:0,82,1292:0,82,255:40,0 chr2 224463060 . A . PASS END=224463060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,3:46:66:46:0,66,1512:0,66,255:39,0 chr2 224463061 . A . PASS END=224463899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:31:0,84,1247:0,89,255:40,1 chr2 224463900 . T . PASS END=224463900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1124:0,55,255:28,0 chr2 224463901 . G . PASS END=224463902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:29,0 chr2 224463903 . T . PASS END=224463903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 224463904 . T . PASS END=224463904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 224463905 . T . PASS END=224463921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:27:0,69,1035:0,81,255:26,0 chr2 224463922 . C . PASS END=224463924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 224463925 . C . PASS END=224463926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 224463927 . G . PASS END=224463933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 224463934 . A . PASS END=224463934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:26,0 chr2 224463935 . G . PASS END=224463944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 224463945 . A . PASS END=224463945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 224463946 . T . PASS END=224463948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1062:0,84,255:28,0 chr2 224463949 . A . PASS END=224463960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,71,255:24,0 chr2 224463961 . A . PASS END=224463997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,630:0,48,255:19,0 chr2 224463998 . C . PASS END=224463998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 224463999 . A . PASS END=224464000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 224623432 . T . PASS END=224623467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:70:0,120,1800:0,194,255:40,0 chr2 224629894 . T . PASS END=224629927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:102,0:102:99:90:0,120,1800:0,140,255:40,3 chr2 224629928 . A . PASS END=224630067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:94,1:95:96:49:0,96,1440:0,131,255:40,0 chr2 224634920 . T . PASS END=224634925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 224634926 . A . PASS END=224634926 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 224634927 . A . PASS END=224634940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:26,0 chr2 224634941 . A . PASS END=224634943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 224634944 . T . PASS END=224634944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,919:0,67,255:27,0 chr2 224634945 . A . PASS END=224634945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:27,0 chr2 224634946 . T . PASS END=224634946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 224634947 . A . PASS END=224634952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,934:0,84,255:30,0 chr2 224634953 . A . PASS END=224634953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:29,0 chr2 224634954 . A . PASS END=224635010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:31:0,87,1149:0,93,255:38,0 chr2 224635011 . A . PASS END=224635011 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:65:32:0,65,1141:0,65,255:29,0 chr2 224635012 . G . PASS END=224635029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1002:0,90,255:30,0 chr2 224635030 . A . PASS END=224635031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:29:0,74,1100:0,74,255:27,0 chr2 224635032 . C . PASS END=224635034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 224635035 . T . PASS END=224635036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:27,0 chr2 224635037 . A . PASS END=224635042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:31,0 chr2 224638045 . T . PASS END=224638068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:89:46:0,89,1687:0,89,255:40,0 chr2 224640618 . A . PASS END=224640726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,185,255:40,0 chr2 224640766 . A . PASS END=224640852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:49:0,120,1800:0,130,255:40,0 chr2 224642406 . A . PASS END=224642586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:87:36:0,87,1305:0,100,255:40,0 chr2 224702165 . C . PASS END=224702167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 224743388 . T . PASS END=224743435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,850:0,62,255:26,0 chr2 224743436 . C . PASS END=224743436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:23,0 chr2 224743437 . A . PASS END=224743444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,886:0,72,255:25,0 chr2 224743445 . G . PASS END=224743445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,892:0,59,255:23,0 chr2 224743446 . A . PASS END=224743447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1125:0,78,255:25,0 chr2 224744841 . C . PASS END=224744949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:87:30:0,87,1305:0,90,255:40,0 chr2 224746659 . T . PASS END=224746659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,984:0,78,255:26,0 chr2 224746660 . C . PASS END=224746671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,986:0,81,255:28,0 chr2 224746672 . T . PASS END=224746672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 224746673 . G . PASS END=224746673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 224746674 . G . PASS END=224746674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:27,0 chr2 224746675 . A . PASS END=224746760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:29:0,80,1031:0,80,255:35,0 chr2 224746761 . A . PASS END=224746761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:71:34:0,71,1160:0,71,255:31,0 chr2 224746762 . C . PASS END=224746765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:31,0 chr2 224746766 . C . PASS END=224746766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 224746767 . T . PASS END=224746774 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:31:0,84,1260:0,93,255:29,0 chr2 224746775 . T . PASS END=224746775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 224746776 . T . PASS END=224746784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 224746785 . T . PASS END=224746785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,929:0,54,255:26,0 chr2 224746786 . G . PASS END=224746787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 224746788 . T . PASS END=224746789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:29:0,69,1035:0,87,255:23,0 chr2 224749365 . T . PASS END=224749466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:90:31:0,90,1318:0,92,255:40,0 chr2 224758951 . C . PASS END=224758954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,987:0,84,255:28,0 chr2 224758955 . T . PASS END=224758955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,964:0,70,255:28,0 chr2 224758956 . C . PASS END=224759055 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:87:29:0,87,1070:0,87,255:36,0 chr2 224759056 . A . PASS END=224759056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:29,0 chr2 224760221 . T . PASS END=224760261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:28:0,81,1108:0,84,255:38,0 chr2 224760262 . G . PASS END=224760262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1329:0,75,255:36,0 chr2 224760263 . A . PASS END=224760291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:92:38:0,92,1385:0,92,255:40,0 chr2 224760292 . T . PASS END=224760292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:79:39:0,79,1426:0,79,255:34,0 chr2 224760293 . G . PASS END=224760329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:32:0,85,1132:0,85,255:35,0 chr2 224760330 . A . PASS END=224760330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1092:0,77,255:28,0 chr2 224760331 . G . PASS END=224760336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:29,0 chr2 224760337 . G . PASS END=224760347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:63:29:0,63,945:0,74,255:25,0 chr2 224763675 . C . PASS END=224763778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:88:47:0,88,1800:0,88,255:40,0 chr2 224763779 . A . PASS END=224763787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:87:52:0,87,1762:0,87,255:40,0 chr2 224765900 . T . PASS END=224765905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,933:0,78,255:26,0 chr2 224765906 . C . PASS END=224765931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,918:0,81,255:30,0 chr2 224765932 . C . PASS END=224765995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:30:0,84,1103:0,90,255:37,0 chr2 224765996 . A . PASS END=224766013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:62:24:0,62,945:0,62,255:25,0 chr2 224766014 . A . PASS END=224766024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:51:24:0,51,765:0,56,255:19,0 chr2 224766025 . A . PASS END=224766025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,723:0,27,255:18,0 chr2 224766026 . A . PASS END=224766029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,775:0,50,255:19,0 chr2 224766030 . C . PASS END=224766031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 224766032 . G . PASS END=224766040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 224766041 . T . PASS END=224766041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,706:0,24,255:16,0 chr2 224766042 . T . PASS END=224766050 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:17,0 chr2 224770664 . C . PASS END=224770718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:84,2:86:99:76:0,120,1800:0,215,255:40,0 chr2 224776970 . C . PASS END=224777043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:51:0,120,1800:0,151,255:40,0 chr2 224782660 . A . PASS END=224782719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:95:37:0,95,1279:0,95,255:40,0 chr2 224782720 . G . PASS END=224782720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:49:42:0,49,1443:0,49,255:32,0 chr2 224782721 . G . PASS END=224782727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:35:0,81,1215:0,105,255:32,0 chr2 224809865 . C . PASS END=224809882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr2 224809883 . A . PASS END=224809883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,543:0,34,255:15,0 chr2 224809884 . T . PASS END=224809890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,659:0,51,255:17,0 chr2 224809891 . G . PASS END=224809916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,753:0,60,255:22,0 chr2 224809917 . C . PASS END=224809917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 224809918 . C . PASS END=224809921 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,800:0,66,255:23,0 chr2 224809922 . A . PASS END=224809922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 224809923 . C . PASS END=224809923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,861:0,69,255:23,0 chr2 224809924 . G . PASS END=224809924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 224809925 . G . PASS END=224809935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,823:0,69,255:23,0 chr2 224809936 . C . PASS END=224809947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,52,255:19,0 chr2 224809948 . G . PASS END=224809948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 224809949 . C . PASS END=224809954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:14,0 chr2 224809955 . A . PASS END=224809960 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:14:0,39,585:0,42,255:13,0 chr2 224809961 . G . PASS END=224809961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 224809962 . G . PASS END=224809964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 224809965 . G . PASS END=224809965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 224809966 . G . PASS END=224809997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,388:0,33,255:12,0 chr2 224809998 . C . PASS END=224810000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 224810001 . T . PASS END=224810001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,333:0,16,255:9,0 chr2 224815645 . A . PASS END=224815776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:37:0,102,1454:0,103,255:40,1 chr2 224815777 . A . PASS END=224815777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:56:40:0,56,1235:0,56,255:31,0 chr2 224815778 . T . PASS END=224815781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:39:0,99,1485:0,100,255:33,0 chr2 224822190 . A . PASS END=224822203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,884:0,69,255:26,0 chr2 224822204 . G . PASS END=224822209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,942:0,81,255:28,0 chr2 224822210 . A . PASS END=224822210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,871:0,67,255:27,0 chr2 224822211 . T . PASS END=224822213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1047:0,84,255:28,0 chr2 224822214 . C . PASS END=224822214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 224822215 . T . PASS END=224822232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1031:0,84,255:29,0 chr2 224822233 . G . PASS END=224822233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 224822234 . C . PASS END=224822240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 224822241 . G . PASS END=224822241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1061:0,60,255:26,0 chr2 224822242 . C . PASS END=224822245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:29:0,87,1072:0,87,255:29,0 chr2 224822246 . A . PASS END=224822246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 224822247 . G . PASS END=224822248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1064:0,87,255:29,0 chr2 224822249 . C . PASS END=224822249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 224822250 . G . PASS END=224822252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1260:0,87,255:30,0 chr2 224822253 . C . PASS END=224822254 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:28,0 chr2 224822255 . C . PASS END=224822262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 224822263 . T . PASS END=224822263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1049:0,76,255:29,0 chr2 224822264 . C . PASS END=224822264 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 224822265 . C . PASS END=224822265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 224822266 . C . PASS END=224822271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:29,0 chr2 224822272 . T . PASS END=224822272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,988:0,73,255:27,0 chr2 224822273 . T . PASS END=224822283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 224822284 . A . PASS END=224822284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:28,0 chr2 224822285 . G . PASS END=224822289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:28,0 chr2 224822290 . G . PASS END=224822315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:25:0,60,900:0,68,255:26,0 chr2 224822316 . A . PASS END=224822345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr2 224822346 . T . PASS END=224822346 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,637:0,18,255:14,0 chr2 224822347 . G . PASS END=224822349 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:14,0 chr2 224822350 . C . PASS END=224822354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:12:17:0,12,551:0,12,255:15,0 chr2 224822355 . C . PASS END=224822363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,513:0,45,255:15,0 chr2 224822364 . C . PASS END=224822368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:15:0,33,495:0,45,255:11,0 chr2 224824251 . T . PASS END=224824564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:83:33:0,83,1093:0,83,255:40,0 chr2 224824565 . T . PASS END=224824565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1351:0,75,255:35,0 chr2 224824566 . C . PASS END=224824685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:81:33:0,81,1215:0,83,255:40,0 chr2 224824686 . C . PASS END=224824715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:22:0,66,831:0,66,255:26,0 chr2 224824716 . C . PASS END=224824719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:23:0,51,765:0,69,255:19,0 chr2 224828473 . G . PASS END=224828473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1133:0,80,255:31,0 chr2 224828474 . A . PASS END=224828474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:31,0 chr2 224828475 . C . PASS END=224828481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:98:36:0,98,1313:0,98,255:38,0 chr2 224828482 . A . PASS END=224828482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1382:0,78,255:38,0 chr2 224828483 . T . PASS END=224828638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:84:35:0,84,1271:0,84,255:40,0 chr2 224828639 . T . PASS END=224828642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:66:35:0,66,990:0,105,255:22,0 chr2 224828643 . C . PASS END=224828651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:48:22:0,48,720:0,66,255:19,0 chr2 224831580 . T . PASS END=224831738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:87:33:0,87,1223:0,89,255:40,0 chr2 224831739 . C . PASS END=224831751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:66:25:0,66,990:0,75,255:25,0 chr2 224840584 . T . PASS END=224840621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:59:0,120,1800:0,143,255:40,0 chr2 224842261 . C . PASS END=224842344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,2:59:99:49:0,120,1800:0,144,255:40,0 chr2 224845028 . T . PASS END=224845117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:47:0,120,1800:0,123,255:40,0 chr2 224847398 . T . PASS END=224847498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:54:0,120,1800:0,136,255:40,0 chr2 224849469 . T . PASS END=224849481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:30:0,84,1247:0,86,255:35,0 chr2 224849482 . C . PASS END=224849482 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:75:38:0,75,1357:0,75,255:38,0 chr2 224849483 . C . PASS END=224849667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:88:37:0,88,1322:0,88,255:40,0 chr2 224856520 . C . PASS END=224856520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,955:0,78,255:26,0 chr2 224856521 . A . PASS END=224856527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1017:0,84,255:28,0 chr2 224856528 . A . PASS END=224856528 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 224856529 . A . PASS END=224856535 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:29,0 chr2 224856536 . G . PASS END=224856536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:27,0 chr2 224856537 . A . PASS END=224856539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 224856540 . T . PASS END=224856540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:28,0 chr2 224856541 . G . PASS END=224856543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:29,0 chr2 224856544 . C . PASS END=224856544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1086:0,52,255:29,0 chr2 224856545 . C . PASS END=224856545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 224856546 . A . PASS END=224856683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:80:30:0,80,1155:0,80,255:40,0 chr2 224856684 . A . PASS END=224856684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1034:0,79,255:28,0 chr2 224856685 . T . PASS END=224856685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:87:32:0,87,1305:0,96,255:29,0 chr2 224856686 . A . PASS END=224856709 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:24:0,63,945:0,72,255:24,0 chr2 224856710 . A . PASS END=224856710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,804:0,39,255:19,0 chr2 224856711 . A . PASS END=224856712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 224856713 . C . PASS END=224856717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:53:23:0,53,790:0,53,255:19,0 chr2 224862832 . C . PASS END=224862832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 224862833 . C . PASS END=224862833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1224:0,72,255:32,0 chr2 224862834 . C . PASS END=224862838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:89:34:0,89,1219:0,89,255:34,0 chr2 224862839 . T . PASS END=224862839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1195:0,66,255:34,0 chr2 224862840 . T . PASS END=224863059 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:35:0,81,1390:0,81,255:40,0 chr2 224866358 . C . PASS END=224866372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,504:0,42,255:18,0 chr2 224866373 . C . PASS END=224866375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 224866376 . A . PASS END=224866376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:16:21:0,16,651:0,16,255:18,0 chr2 224866377 . T . PASS END=224866377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 224866378 . C . PASS END=224866399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:26,0 chr2 224866400 . G . PASS END=224866426 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1000:0,81,255:34,0 chr2 224866427 . A . PASS END=224866427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr2 224866428 . T . PASS END=224866586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:96:35:0,96,1379:0,98,255:40,0 chr2 224866587 . C . PASS END=224866587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1287:0,75,255:31,0 chr2 224866588 . C . PASS END=224866590 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:82:33:0,82,1157:0,82,255:29,0 chr2 224866591 . G . PASS END=224866592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1048:0,66,255:28,0 chr2 224866593 . G . PASS END=224866593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:33:0,87,1305:0,99,255:29,0 chr2 224866594 . G . PASS END=224866594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1122:0,63,255:27,0 chr2 224866595 . A . PASS END=224866603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 224866604 . A . PASS END=224866605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:28,0 chr2 224866606 . A . PASS END=224866606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 224866607 . T . PASS END=224866608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:60:31:0,60,1024:0,60,255:25,0 chr2 224866609 . C . PASS END=224866609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 224866610 . C . PASS END=224866612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:66:30:0,66,990:0,90,255:25,0 chr2 224866613 . T . PASS END=224866613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:25:30:0,25,758:0,25,255:20,0 chr2 224866614 . T . PASS END=224866630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:23,0 chr2 224866631 . A . PASS END=224866631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:20,0 chr2 224866632 . A . PASS END=224866635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:20,0 chr2 224866636 . C . PASS END=224866636 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,745:0,49,255:19,0 chr2 224866637 . G . PASS END=224866639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 224903207 . C . PASS END=224903220 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:51:0,120,1800:0,153,255:40,0 chr2 225244290 . C . PASS END=225244436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:96:35:0,96,1335:0,96,255:40,0 chr2 225244437 . G . PASS END=225244437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:71:42:0,71,1496:0,71,255:33,2 chr2 225244438 . T . PASS END=225244438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:57:42:0,57,1374:0,57,255:33,2 chr2 225244439 . T . PASS END=225244492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:28:0,81,1215:0,82,255:40,0 chr2 225244493 . T . PASS END=225244493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 225244494 . G . PASS END=225244501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:29,0 chr2 225244502 . A . PASS END=225244502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1062:0,74,255:28,0 chr2 225244503 . A . PASS END=225244545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1056:0,80,255:31,0 chr2 225244546 . T . PASS END=225244548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,950:0,62,255:28,0 chr2 225244549 . A . PASS END=225244551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 225244552 . A . PASS END=225244553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr2 225244554 . G . PASS END=225244575 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:90:33:0,90,1350:0,99,255:33,0 chr2 225244576 . G . PASS END=225244576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:67:35:0,67,1255:0,67,255:30,0 chr2 225244577 . T . PASS END=225244633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:29:0,80,1064:0,80,255:35,0 chr2 225244634 . C . PASS END=225244635 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 225244636 . G . PASS END=225244644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 225244645 . T . PASS END=225244645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,963:0,78,255:26,0 chr2 225244646 . G . PASS END=225244648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1070:0,84,255:28,0 chr2 225244649 . G . PASS END=225244649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:26,0 chr2 225244650 . A . PASS END=225244654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 225244655 . A . PASS END=225244664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:28:0,60,900:0,84,255:25,0 chr2 225244665 . G . PASS END=225244671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:54:25:0,54,810:0,75,255:19,0 chr2 225244672 . C . PASS END=225244674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:26:0,63,945:0,78,255:22,0 chr2 225244675 . A . PASS END=225244675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 225244676 . T . PASS END=225244678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 225244679 . C . PASS END=225244679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 225244680 . T . PASS END=225244680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 225244681 . G . PASS END=225244681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:22,0 chr2 225244682 . G . PASS END=225244688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,847:0,69,255:23,0 chr2 225244689 . G . PASS END=225244692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 225244693 . T . PASS END=225244697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:28:0,75,1125:0,84,255:26,0 chr2 225244698 . T . PASS END=225244699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 225244700 . A . PASS END=225244704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 225244705 . C . PASS END=225244707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 225244708 . G . PASS END=225244708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:56:29:0,56,1016:0,56,255:26,0 chr2 225244709 . G . PASS END=225244712 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1037:0,84,255:28,0 chr2 225244713 . T . PASS END=225244714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 225244715 . T . PASS END=225244719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 225244720 . G . PASS END=225244723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,87,255:26,0 chr2 225244724 . T . PASS END=225244724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 225244725 . G . PASS END=225244731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 225244732 . C . PASS END=225244737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 225244738 . T . PASS END=225244738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 225244739 . C . PASS END=225244745 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 225244746 . G . PASS END=225244752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 225244753 . C . PASS END=225244789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1215:0,84,255:31,0 chr2 225244790 . A . PASS END=225244790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 225244791 . C . PASS END=225244795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1080:0,90,255:31,0 chr2 225244796 . T . PASS END=225244796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 225244797 . G . PASS END=225244815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1164:0,90,255:31,0 chr2 225244816 . C . PASS END=225244819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:26,0 chr2 225244820 . G . PASS END=225244820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1055:0,51,255:23,0 chr2 225244821 . T . PASS END=225244865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 225244866 . G . PASS END=225244866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:23,0 chr2 225244867 . G . PASS END=225244905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:25:0,62,914:0,62,255:26,0 chr2 225244906 . A . PASS END=225244906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 225244907 . G . PASS END=225244908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 225244909 . T . PASS END=225244909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:25:0,57,855:0,75,255:19,0 chr2 225244910 . C . PASS END=225244914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 225244915 . T . PASS END=225244925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 225265136 . T . PASS END=225265222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:83:33:0,83,1146:0,83,255:40,0 chr2 225265754 . C . PASS END=225265775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,652:0,48,255:19,0 chr2 225265776 . T . PASS END=225265788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,775:0,60,255:26,0 chr2 225265789 . T . PASS END=225265789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1039:0,81,255:27,0 chr2 225265790 . C . PASS END=225265791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 225265792 . G . PASS END=225265792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,986:0,45,255:26,0 chr2 225265793 . C . PASS END=225265795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 225265796 . C . PASS END=225265801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:28:0,75,1125:0,84,255:26,0 chr2 225265802 . G . PASS END=225265835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1148:0,84,255:32,0 chr2 225265836 . G . PASS END=225265836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:30,0 chr2 225265837 . G . PASS END=225265855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:31:0,85,1103:0,85,255:35,0 chr2 225265856 . T . PASS END=225265856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1310:0,70,255:34,0 chr2 225265857 . T . PASS END=225266062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:81:33:0,81,1103:0,81,255:40,0 chr2 225266063 . C . PASS END=225266063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1221:0,74,255:31,0 chr2 225266064 . G . PASS END=225266076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:33:0,84,1202:0,86,255:32,0 chr2 225266077 . T . PASS END=225266077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,939:0,79,255:28,0 chr2 225266078 . C . PASS END=225266078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:28,0 chr2 225266079 . T . PASS END=225266082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 225266083 . A . PASS END=225266096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:69:29:0,69,1035:0,71,255:26,0 chr2 225266097 . T . PASS END=225266097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,978:0,53,255:22,0 chr2 225266098 . G . PASS END=225266190 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,795:0,66,255:25,0 chr2 225266191 . T . PASS END=225266192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:57:24:0,57,855:0,72,255:19,0 chr2 225266193 . G . PASS END=225266239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,734:0,68,255:23,0 chr2 225266240 . T . PASS END=225266240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:20,0 chr2 225266241 . A . PASS END=225266245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,1069:0,71,255:26,0 chr2 225266246 . A . PASS END=225266418 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:28:0,81,1033:0,84,255:38,0 chr2 225266419 . G . PASS END=225266447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:24:0,67,825:0,67,255:26,0 chr2 225266448 . T . PASS END=225266448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,807:0,55,255:22,0 chr2 225266449 . G . PASS END=225266457 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:23,0 chr2 225266458 . T . PASS END=225266464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:21:0,57,855:0,63,255:19,0 chr2 225266465 . A . PASS END=225266467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:21,0 chr2 225266468 . C . PASS END=225266485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:18:0,42,630:0,54,255:18,0 chr2 225334874 . A . PASS END=225334874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:89:35:0,89,1231:0,89,255:34,0 chr2 225335004 . G . PASS END=225335004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,102,1530:0,111,255:34,0 chr2 225335040 . T . PASS END=225335040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 225335152 . G . PASS END=225335152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 225335176 . G . PASS END=225335176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:57:30:0,57,855:0,90,255:19,0 chr2 225335196 . C . PASS END=225335196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:45:33:0,45,675:0,99,255:15,0 chr2 225335209 . A . PASS END=225335209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:39:32:0,39,585:0,96,255:13,0 chr2 225335297 . A . PASS END=225335297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,111,1665:0,117,255:37,0 chr2 225335366 . T . PASS END=225335366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:93:33:0,93,1395:0,99,255:31,0 chr2 225335570 . T . PASS END=225335570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,187,255:40,0 chr2 225335828 . T . PASS END=225335828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 225335866 . C . PASS END=225335866 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 225335936 . C . PASS END=225335936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,160,255:40,0 chr2 225336012 . A . PASS END=225336012 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 225336094 . A . PASS END=225336094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 225336108 . T . PASS END=225336108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 225336111 . T . PASS END=225336111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 225336196 . C . PASS END=225336196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 225336206 . C . PASS END=225336206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 225336273 . A . PASS END=225336273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,114,1710:0,138,255:38,0 chr2 225336378 . A . PASS END=225336378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 225336409 . T . PASS END=225336409 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 225336493 . C . PASS END=225336493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,1:59:99:59:0,120,1800:0,161,255:40,0 chr2 225336538 . G . PASS END=225336538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 225336621 . C . PASS END=225336621 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 225336690 . A . PASS END=225336690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:56:0,120,1800:0,152,255:40,0 chr2 225336767 . T . PASS END=225336767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 225336832 . T . PASS END=225336832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,99,1485:0,122,255:33,0 chr2 225336869 . T . PASS END=225336869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 225336924 . T . PASS END=225336924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 225336954 . C . PASS END=225336954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:34:0,84,1260:0,102,255:28,0 chr2 225337019 . T . PASS END=225337019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:31:0,84,1260:0,93,255:28,0 chr2 225337079 . A . PASS END=225337079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,961:0,65,255:21,0 chr2 225337444 . T . PASS END=225337444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,3:61:99:61:0,119,1989:0,119,255:40,0 chr2 225337456 . C . PASS END=225337456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:62:0,120,1800:0,186,255:40,0 chr2 225337464 . G . PASS END=225337464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,184,255:40,0 chr2 225337505 . A . PASS END=225337505 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 225338047 . T . PASS END=225338047 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,102,1530:0,105,255:34,0 chr2 225338057 . T . PASS END=225338057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,99,1485:0,105,255:33,0 chr2 225338172 . A . PASS END=225338172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,120,1511:0,120,255:40,0 chr2 225338178 . C . PASS END=225338178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 225338180 . C . PASS END=225338180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 225338226 . T . PASS END=225338226 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,177,255:40,0 chr2 225338298 . A . PASS END=225338298 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 225338417 . T . PASS END=225338417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 225338422 . C . PASS END=225338422 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 225338435 . T . PASS END=225338435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 225338463 . A . PASS END=225338463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,1:44:99:44:0,116,1504:0,116,255:40,0 chr2 225338466 . T . PASS END=225338466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 225338668 . T . PASS END=225338668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:71:0,120,1800:0,213,255:40,0 chr2 225338755 . C . PASS END=225338755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:61:0,120,1800:0,184,255:40,0 chr2 225338873 . T . PASS END=225338873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 225338878 . G . PASS END=225338878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 225338962 . T . PASS END=225339093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:51:0,120,1800:0,136,255:40,0 chr2 225342917 . C . PASS END=225343062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:85:34:0,85,1180:0,85,255:40,0 chr2 225346609 . C . PASS END=225346615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:20:0,60,751:0,60,255:24,0 chr2 225346616 . A . PASS END=225346645 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:81:27:0,81,1035:0,81,255:40,0 chr2 225346646 . T C, 50.00 PASS DP=40;MQ=250.00;MQRankSum=5.335;ReadPosRankSum=2.079;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:17,23,0:0.575,0.000:40:8,10,0:9,13,0:47:85,0,48,814,608,1422:255,0,255:16,0:5.0000e+01,7.7659e-05,5.1041e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:12,5,14,9:11,6,11,12 chr2 225346647 . T . PASS END=225346683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:40:0,105,1559:0,105,255:40,0 chr2 225346684 . C . PASS END=225346750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:46:0,108,1620:0,131,255:40,0 chr2 225346751 . T . PASS END=225346751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,2:45:57:45:0,57,1432:0,57,255:36,0 chr2 225346752 . C . PASS END=225346775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:31:0,84,1260:0,93,255:36,0 chr2 225346776 . T . PASS END=225346795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:62:26:0,62,922:0,62,255:26,0 chr2 225360549 . C . PASS END=225360683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,108,1394:0,112,255:40,0 chr2 225362470 . C . PASS END=225362477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,167,255:40,0 chr2 225362478 . C T, 49.96 PASS DP=59;MQ=250.00;MQRankSum=6.588;ReadPosRankSum=4.632;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:30,29,0:0.492,0.000:59:12,16,0:18,13,0:48:85,0,50,1000,1065,2065:255,0,255:31,0:4.9963e+01,6.5492e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:14,16,22,7:16,14,19,10 chr2 225362479 . T . PASS END=225362515 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:92:60:0,92,1800:0,92,255:40,0 chr2 225362516 . A . PASS END=225362566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:46:0,120,1800:0,125,255:40,0 chr2 225365080 . C . PASS END=225365093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:48:0,120,1800:0,137,255:40,0 chr2 225365094 . A . PASS END=225365204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:84:35:0,84,1260:0,92,255:40,0 chr2 225367682 . A . PASS END=225367706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:49:0,120,1800:0,133,255:40,0 chr2 225367707 . A . PASS END=225367789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:40:0,105,1508:0,111,255:40,0 chr2 225368364 . C . PASS END=225368364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:66:0,120,1800:0,182,255:40,0 chr2 225368366 . T . PASS END=225368540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:87,0:87:99:58:0,120,1800:0,147,255:40,1 chr2 225368542 . G . PASS END=225368542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 225368544 . A . PASS END=225368544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 225368551 . A . PASS END=225368551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 225370673 . C . PASS END=225370674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 225370675 . C . PASS END=225370683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 225370684 . C . PASS END=225370684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1080:0,76,255:28,0 chr2 225370685 . C . PASS END=225370685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1141:0,57,255:30,2 chr2 225370686 . T . PASS END=225370686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:30:33:0,30,1086:0,30,255:30,2 chr2 225370687 . T . PASS END=225370687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:58:32:0,58,1123:0,58,255:31,0 chr2 225370688 . T . PASS END=225370695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1210:0,96,255:35,0 chr2 225370696 . T . PASS END=225370696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1148:0,72,255:31,0 chr2 225370697 . A . PASS END=225370838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:89:35:0,89,1241:0,89,255:40,0 chr2 225370839 . T . PASS END=225370849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:63:30:0,63,945:0,90,255:22,0 chr2 225371575 . C . PASS END=225371719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:88:35:0,88,1197:0,88,255:40,0 chr2 225371720 . T . PASS END=225371720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:74:35:0,74,1195:0,74,255:30,0 chr2 225371725 . A . PASS END=225371725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:34:0,87,1305:0,102,255:29,0 chr2 225376071 . C . PASS END=225376071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1203:0,88,255:32,0 chr2 225376072 . T . PASS END=225376260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:86:33:0,86,1210:0,86,255:40,0 chr2 225376261 . T . PASS END=225376261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1360:0,78,255:31,0 chr2 225376262 . G . PASS END=225376268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:80:32:0,80,1169:0,80,255:29,0 chr2 225376269 . T . PASS END=225376269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1086:0,79,255:27,0 chr2 225376270 . A . PASS END=225376275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1139:0,80,255:28,0 chr2 225376276 . T . PASS END=225376276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:26,0 chr2 225376277 . G . PASS END=225376278 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 225376279 . T . PASS END=225376279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,998:0,68,255:26,0 chr2 225376280 . A . PASS END=225376284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 225376285 . T . PASS END=225376285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,970:0,78,255:26,0 chr2 225376286 . T . PASS END=225376287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,960:0,81,255:27,0 chr2 225376288 . C . PASS END=225376288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 225376289 . T . PASS END=225376289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1024:0,81,255:27,0 chr2 225376290 . G . PASS END=225376299 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:26,0 chr2 225378241 . C . PASS END=225378312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:93:43:0,93,1521:0,93,255:40,0 chr2 225378313 . A . PASS END=225378313 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1285:0,73,255:33,0 chr2 225378314 . C . PASS END=225378318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,108,1620:0,126,255:38,0 chr2 225378319 . A . PASS END=225378319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1434:0,77,255:34,0 chr2 225378320 . A . PASS END=225378337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:83:37:0,83,1319:0,83,255:36,0 chr2 225378338 . G . PASS END=225378338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:47:39:0,47,1260:0,47,255:28,0 chr2 225378339 . C . PASS END=225378355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:35:0,90,1350:0,97,255:33,0 chr2 225379329 . C . PASS END=225379329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,906:0,48,255:23,0 chr2 225379330 . T . PASS END=225379330 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 225379331 . G . PASS END=225379489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:90:40:0,90,1350:0,110,255:40,0 chr2 225400245 . C . PASS END=225400358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:100,0:100:99:60:0,120,1800:0,146,255:40,0 chr2 225421012 . C . PASS END=225421083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:75:0,120,1800:0,204,255:40,0 chr2 225422376 . C . PASS END=225422544 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:84:35:0,84,1197:0,84,255:40,0 chr2 225422545 . C . PASS END=225422545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:40:68:0,40,2121:0,40,255:40,0 chr2 225422546 . T . PASS END=225422550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,2:67:85:67:0,85,1800:0,85,255:40,0 chr2 225422551 . A . PASS END=225422551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,2:68:99:68:0,120,1800:0,127,255:40,0 chr2 225422552 . C . PASS END=225422552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:71:68:0,71,2279:0,71,255:40,0 chr2 225422553 . A . PASS END=225422553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,5:68:41:68:0,41,2150:0,41,255:40,0 chr2 225422554 . T . PASS END=225422557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,3:68:99:68:0,109,1800:0,109,255:40,0 chr2 225422558 . T . PASS END=225422558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,4:68:72:68:0,72,2288:0,72,255:40,0 chr2 225422559 . T . PASS END=225422563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,3:66:89:66:0,89,1800:0,89,255:40,0 chr2 225422564 . C . PASS END=225422565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,5:65:68:62:0,68,1984:0,68,255:40,0 chr2 225422566 . A . PASS END=225422567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,3:62:99:61:0,108,1800:0,108,255:40,0 chr2 225422568 . G . PASS END=225422568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,6:61:69:61:0,69,1861:0,69,255:40,0 chr2 225422569 . G . LowGQ END=225422569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,8:61:0:61:0,0,1810:0,0,255:40,0 chr2 225422570 . T . PASS END=225422570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,5:61:42:61:0,42,1917:0,42,255:40,0 chr2 225422571 . C . LowGQ END=225422571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,7:60:0:60:0,0,1791:9,0,255:40,0 chr2 225422572 . A . PASS END=225422572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:93:58:0,93,1864:0,93,255:40,0 chr2 225422573 . T . PASS END=225422573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,4:58:49:58:0,49,1817:0,49,255:39,0 chr2 225425157 . C . PASS END=225425180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:65:0,120,1800:0,157,255:40,0 chr2 225427911 . C . PASS END=225428037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:89,1:90:99:76:0,120,1800:0,227,255:40,0 chr2 225434406 . A . PASS END=225434489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,0:91:99:61:0,120,1800:0,183,255:40,0 chr2 225449661 . C . PASS END=225449670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,582:0,48,255:16,0 chr2 225449671 . C . PASS END=225449671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,535:0,9,255:15,0 chr2 225449672 . G . PASS END=225449682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,582:0,48,255:17,0 chr2 225449683 . T . PASS END=225449684 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 225449685 . G . PASS END=225449689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,647:0,54,255:19,0 chr2 225449690 . C . PASS END=225449695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,721:0,60,255:20,0 chr2 225449696 . G . PASS END=225449700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:53:20:0,53,798:0,53,255:20,0 chr2 225449701 . C . PASS END=225449714 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,717:0,66,255:22,0 chr2 225449715 . C . PASS END=225449715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 225449716 . A . PASS END=225449716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 225449717 . G . PASS END=225449717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:19,0 chr2 225449718 . A . PASS END=225449722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 225449723 . A . PASS END=225449726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:46:21:0,46,692:0,46,255:19,0 chr2 225449733 . C . PASS END=225449733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:51:21:0,51,765:0,63,255:17,0 chr2 225449844 . G . PASS END=225449844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:3,0:3:6:3:0,6,90:0,9,116:2,0 chr2 225449869 . C . PASS END=225449869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:3:2:0,3,45:0,6,70:1,0 chr2 225449891 . GGGGGCGGC G, 0.02 DRAGENIndelHardQUAL DP=2;MQ=247.51;MQRankSum=0.804;ReadPosRankSum=0.804;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB:PS 0|0:1,1,0:0.500,0.000:2:1,0,0:0,1,0:23:7,0,13,113,113,113:70,6,0:0,2:2.0587e-02,2.3362e+01,3.9279e+01,1.4104e+02,1.7104e+02,1.4405e+02:0.00,30.00,33.01,34.77,64.77,37.78:1,0,0,1:1,0,1,0:225449889 chr2 225449893 . GGGCGGC G, 3.76 DRAGENIndelHardQUAL DP=2;MQ=247.51;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:2,0,0:0.000,0.000:2:1,0,0:1,0,0:4:13,0,12,113,113,113:70,6,0:0,2:3.7624e+00,2.4926e+00,1.7904e+01,1.3853e+02,1.5053e+02,1.4154e+02:0.00,12.00,15.01,34.77,46.77,37.78:1,1,0,0:2,0,0,0 chr2 225449895 . G . PASS END=225449895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr2 225449899 . C . LowGQ END=225449899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT ./.:1,1:2:0:2:0,0,0:33,0,25:1,0 chr2 225449911 . C . PASS END=225449911 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:2,0:2:6:2:0,6,78:0,6,78:2,0 chr2 225449927 . G . PASS END=225449927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:4,0:4:12:4:0,12,155:0,12,155:4,0 chr2 225449972 . G . PASS END=225449972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,310:0,24,255:8,0 chr2 225449996 . C . PASS END=225449996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 225450017 . T . PASS END=225450017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 225450043 . G . PASS END=225450043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:14:0,36,540:0,42,255:12,0 chr2 225568481 . C . PASS END=225568604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:61:0,120,1800:0,178,255:40,0 chr2 225574690 . C . PASS END=225574903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:80:32:0,80,1151:0,80,255:40,0 chr2 225574904 . A . PASS END=225574905 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:28,0 chr2 225574906 . A . PASS END=225574909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 225574910 . A . PASS END=225574910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 225574911 . A . PASS END=225574913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 225574914 . G . PASS END=225574927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:65:24:0,65,945:0,65,255:25,0 chr2 225574928 . T . PASS END=225574928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,853:0,33,255:21,0 chr2 225574929 . G . PASS END=225574929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 225574930 . A . PASS END=225574931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:56:24:0,56,851:0,56,255:22,0 chr2 225574932 . A . PASS END=225574934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 225574935 . G . PASS END=225574936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 225580848 . C . PASS END=225580850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1049:0,87,255:30,0 chr2 225580851 . G . PASS END=225580851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:29,0 chr2 225580852 . G . PASS END=225580852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1096:0,90,255:30,0 chr2 225580853 . T . PASS END=225580853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,995:0,59,255:28,0 chr2 225580854 . G . PASS END=225580858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:31:0,87,1305:0,93,255:30,0 chr2 225580859 . T . PASS END=225580859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1147:0,44,255:29,0 chr2 225580860 . G . PASS END=225580869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:82:31:0,82,1082:0,82,255:31,0 chr2 225580870 . T . PASS END=225580870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 225580871 . G . PASS END=225580977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:80:31:0,80,1141:0,80,255:40,0 chr2 225580978 . A . PASS END=225580978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,3:41:73:41:0,73,1349:0,73,255:35,0 chr2 225580979 . C . PASS END=225581022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:41:0,110,1527:0,110,255:40,0 chr2 225581023 . T . PASS END=225581023 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,5:43:45:43:0,45,1018:0,45,255:37,0 chr2 225581024 . T . PASS END=225581082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:83:29:0,83,1216:0,83,255:40,0 chr2 225630438 . T . PASS END=225630554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:33:0,96,1440:0,99,255:40,0 chr2 225633589 . C . PASS END=225633664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:54:0,120,1800:0,158,255:40,0 chr2 225634673 . C . PASS END=225634874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:80:30:0,80,1074:0,80,255:40,0 chr2 225634875 . G . PASS END=225634895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:69:26:0,69,1035:0,74,255:26,0 chr2 225634896 . C . PASS END=225634922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1163:0,80,255:30,0 chr2 225634923 . C . PASS END=225634923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:28,0 chr2 225634924 . T . PASS END=225634931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:87:32:0,87,1305:0,96,255:31,0 chr2 225634932 . T . PASS END=225634940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:32:0,60,1125:0,60,255:26,0 chr2 225634941 . A . PASS END=225634941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 225634942 . C . PASS END=225634947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 225634948 . A . PASS END=225634951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 225634952 . T . PASS END=225634971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:26:0,75,1125:0,78,255:26,0 chr2 225634972 . A . PASS END=225634978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 225634979 . C . PASS END=225634979 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,869:0,48,255:25,0 chr2 225634980 . C . PASS END=225634985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1015:0,81,255:28,0 chr2 225634986 . T . PASS END=225634986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1030:0,68,255:27,0 chr2 225634987 . C . PASS END=225634990 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1078:0,84,255:28,0 chr2 225634991 . C . PASS END=225634991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 225634992 . T . PASS END=225635003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1086:0,87,255:29,0 chr2 225635004 . T . PASS END=225635004 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 225635005 . G . PASS END=225635010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1054:0,87,255:29,0 chr2 225635011 . C . PASS END=225635039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:25:0,63,945:0,75,255:26,0 chr2 225635040 . G . PASS END=225635066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:44:19:0,44,720:0,44,255:19,0 chr2 225635262 . C . PASS END=225635362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:94:44:0,94,1396:0,94,255:40,0 chr2 225637874 . C . PASS END=225638064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:96:38:0,96,1307:0,97,255:40,0 chr2 225639622 . T . PASS END=225639629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:23:0,69,876:0,69,255:26,0 chr2 225639630 . A . PASS END=225639641 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr2 225639642 . T . PASS END=225639642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:27,0 chr2 225639643 . T . PASS END=225639646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 225639647 . C . PASS END=225639647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:27,0 chr2 225639648 . T . PASS END=225639656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1086:0,87,255:30,0 chr2 225639657 . A . PASS END=225639657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:28,0 chr2 225639658 . C . PASS END=225639669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1260:0,93,255:29,0 chr2 225639670 . T . PASS END=225639670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,989:0,76,255:28,0 chr2 225639671 . C . PASS END=225639679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1149:0,90,255:34,0 chr2 225639680 . C . PASS END=225639680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1185:0,69,255:32,0 chr2 225639681 . A . PASS END=225639796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:34:0,81,1215:0,90,255:39,0 chr2 225639797 . G . PASS END=225639819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:63:26:0,63,945:0,78,255:26,0 chr2 225639820 . C . PASS END=225639831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:47:23:0,47,765:0,47,255:20,0 chr2 225639832 . C . PASS END=225639832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 225642855 . C . PASS END=225642992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:87:31:0,87,1305:0,93,255:40,0 chr2 225642993 . A . PASS END=225642993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1086:0,77,255:28,0 chr2 225642994 . A . PASS END=225642999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 225643000 . C . PASS END=225643000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 225643001 . C . PASS END=225643001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 225649454 . C . PASS END=225649459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:89:35:0,89,1257:0,89,255:33,0 chr2 225651739 . C . PASS END=225651852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,1:73:99:55:0,120,1800:0,138,255:40,0 chr2 225651992 . T . PASS END=225652114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,1:55:80:41:0,80,1395:0,80,255:40,0 chr2 225653781 . C . PASS END=225653887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:45:0,120,1800:0,135,255:40,0 chr2 225657691 . T . PASS END=225657789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:89:48:0,89,1530:0,89,255:40,0 chr2 225658117 . C . PASS END=225658174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,1:70:99:52:0,118,1800:0,118,255:40,0 chr2 225659596 . C . PASS END=225659605 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 225659606 . T . PASS END=225659606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,845:0,58,255:24,0 chr2 225659607 . C . PASS END=225659620 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,914:0,72,255:26,0 chr2 225659621 . T . PASS END=225659626 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,948:0,84,255:28,0 chr2 225659627 . T . PASS END=225659627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,984:0,68,255:27,0 chr2 225659628 . T . PASS END=225659629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1074:0,87,255:30,0 chr2 225659630 . G . PASS END=225659630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1078:0,74,255:29,0 chr2 225659631 . C . PASS END=225659795 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:81:31:0,81,1097:0,89,255:40,0 chr2 225659796 . C . PASS END=225659800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1108:0,74,255:26,0 chr2 225659801 . A . PASS END=225659801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1063:0,51,255:26,0 chr2 225659802 . A . PASS END=225659811 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1003:0,84,255:28,0 chr2 225661033 . T . PASS END=225661100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:87:34:0,87,1264:0,87,255:40,0 chr2 225661101 . C . PASS END=225661101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,2:44:77:44:0,77,1541:0,77,255:34,0 chr2 225661102 . A . PASS END=225661108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:37:0,105,1575:0,111,255:36,0 chr2 225661109 . G . PASS END=225661109 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1274:0,72,255:34,0 chr2 225661110 . C . PASS END=225661112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:95:36:0,95,1319:0,95,255:35,0 chr2 225661113 . C . PASS END=225661113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:75:36:0,75,1255:0,75,255:32,0 chr2 225661114 . G . PASS END=225661139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:82:33:0,82,1119:0,82,255:34,0 chr2 225661140 . T . PASS END=225661143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:68:28:0,68,1000:0,68,255:26,0 chr2 225661681 . T . PASS END=225661863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:31:0,84,1149:0,93,255:40,0 chr2 225662549 . C . PASS END=225662686 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,2:52:84:36:0,84,1241:0,84,255:40,0 chr2 225664868 . C . PASS END=225664980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:38:0,111,1405:0,111,255:40,0 chr2 225666633 . T . PASS END=225666757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:80:33:0,80,1349:0,80,255:40,0 chr2 225668829 . C . PASS END=225668930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:47:0,105,1575:0,117,255:40,0 chr2 225669511 . C . PASS END=225669558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:118,0:118:99:96:0,120,1800:0,255,255:40,0 chr2 225669775 . T . PASS END=225669841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:84:32:0,84,1260:0,96,255:40,0 chr2 225669923 . C . PASS END=225670037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:84:39:0,84,1356:0,84,255:40,0 chr2 225670125 . C . PASS END=225670152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:54:0,120,1800:0,149,255:40,0 chr2 225670153 . C . PASS END=225670153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,6:60:51:60:0,51,1630:0,51,255:40,0 chr2 225670154 . T . PASS END=225670246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:43:0,114,1596:0,116,255:40,0 chr2 225670843 . C . PASS END=225670954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:43:0,108,1625:0,108,255:40,0 chr2 225672385 . C . PASS END=225672385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:29,0 chr2 225672386 . T . PASS END=225672501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:84:33:0,84,1241:0,84,255:40,0 chr2 225672628 . T . PASS END=225672803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:89:35:0,89,1263:0,89,255:40,0 chr2 225679037 . C . PASS END=225679081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,1:77:99:70:0,120,1800:0,133,255:40,0 chr2 225681334 . C . PASS END=225681430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,0:73:99:54:0,120,1800:0,162,255:40,0 chr2 225684163 . C . PASS END=225684246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:93:35:0,93,1395:0,105,255:40,0 chr2 225688218 . C . PASS END=225688364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:87:40:0,87,1305:0,118,255:40,0 chr2 225695258 . C . PASS END=225695329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:50:0,120,1800:0,128,255:40,0 chr2 225698867 . C . PASS END=225698964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:81:38:0,81,1215:0,101,255:40,0 chr2 225698965 . T . PASS END=225698980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:24:0,63,945:0,68,255:24,0 chr2 225702479 . C . PASS END=225702548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,0:63:99:53:0,120,1800:0,143,255:40,0 chr2 225704671 . C . PASS END=225704789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:50:0,120,1800:0,134,255:40,0 chr2 225706521 . C . PASS END=225706578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:67:0,120,1800:0,168,255:40,0 chr2 225706579 . T . PASS END=225706613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:67:0,120,1800:0,159,255:40,0 chr2 225709470 . C . PASS END=225709556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:44:0,120,1800:0,127,255:40,0 chr2 225709920 . C . PASS END=225710041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:66:0,120,1800:0,171,255:40,0 chr2 225710236 . C . PASS END=225710261 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:82:32:0,82,1141:0,82,255:33,0 chr2 225710262 . T . PASS END=225710262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1125:0,68,255:31,0 chr2 225710263 . T . PASS END=225710265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:34:0,99,1485:0,102,255:34,0 chr2 225710266 . C . PASS END=225710266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1238:0,72,255:32,0 chr2 225710267 . A . PASS END=225710312 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1176:0,91,255:36,0 chr2 225710313 . A . PASS END=225710320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:29:0,75,1125:0,87,255:26,0 chr2 225710321 . G . PASS END=225710321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,994:0,48,255:24,0 chr2 225710322 . T . PASS END=225710326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,907:0,64,255:26,0 chr2 225710327 . C . PASS END=225710328 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1008:0,81,255:27,0 chr2 225710329 . C . PASS END=225710331 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,967:0,65,255:26,0 chr2 225710332 . G . PASS END=225710359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:17:0,45,675:0,51,255:19,0 chr2 225714224 . C . PASS END=225714316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:89:34:0,89,1294:0,89,255:40,0 chr2 225717094 . C . PASS END=225717159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:38:0,104,1435:0,104,255:40,0 chr2 225717652 . C . PASS END=225717823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:49:0,102,1530:0,136,255:40,0 chr2 225717824 . G . PASS END=225717824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,1:47:78:47:0,78,1170:0,125,255:26,0 chr2 225717825 . A . PASS END=225717839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:81:27:0,81,935:0,81,255:27,0 chr2 225719680 . T . PASS END=225719731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:95,0:95:99:77:0,120,1800:0,188,255:40,0 chr2 225719732 . G . PASS END=225719759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:92,1:93:99:90:0,120,1800:0,235,255:40,0 chr2 225721577 . C . PASS END=225721699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:43:0,120,1800:0,127,255:40,0 chr2 225727381 . C . PASS END=225727463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:67:0,120,1800:0,197,255:40,0 chr2 225729270 . C . PASS END=225729270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,0:49:99:49:0,120,1800:0,147,255:40,0 chr2 225729271 . T . PASS END=225729392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:71,0:71:99:49:0,120,1800:0,123,255:40,0 chr2 225729583 . C . PASS END=225729804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:91:34:0,91,1203:0,91,255:40,0 chr2 225738713 . A . PASS END=225738868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:82:38:0,82,1421:0,82,255:40,0 chr2 225738983 . A . PASS END=225739066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:78,0:78:99:62:0,120,1800:0,179,255:40,0 chr2 225739383 . C . PASS END=225739468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:48:0,106,1734:0,106,255:40,0 chr2 225740755 . C . PASS END=225740928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:84:30:0,84,1111:0,90,255:40,0 chr2 225740929 . G . PASS END=225740938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:60:31:0,60,900:0,93,255:23,0 chr2 225750388 . C . PASS END=225750522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:73,1:74:99:44:0,109,1665:0,109,255:40,0 chr2 225750780 . C . PASS END=225750902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:90:39:0,90,1350:0,90,255:40,0 chr2 225751176 . T . PASS END=225751211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,2:76:99:67:0,120,1800:0,131,255:40,0 chr2 225751212 . G . PASS END=225751248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:69,0:69:81:47:0,81,1215:0,121,255:40,0 chr2 225758357 . C . PASS END=225758369 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:42:0,116,1568:0,116,255:40,0 chr2 225761012 . C . PASS END=225761094 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:45:0,105,1604:0,105,255:40,0 chr2 225781412 . C . PASS END=225781501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:95:35:0,95,1319:0,95,255:40,0 chr2 225796266 . T . PASS END=225796276 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 225796277 . C . PASS END=225796277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 225796278 . A . PASS END=225796283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,980:0,81,255:27,0 chr2 225796284 . G . PASS END=225796284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:26,0 chr2 225796285 . A . PASS END=225796285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 225796286 . A . PASS END=225796286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:28,0 chr2 225796287 . G . PASS END=225796294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1094:0,90,255:30,0 chr2 225796295 . G . PASS END=225796295 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 225796296 . A . PASS END=225796380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1117:0,82,255:38,0 chr2 225796381 . T . PASS END=225796381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,2:30:57:30:0,57,938:0,57,255:26,0 chr2 225796382 . C . PASS END=225796385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:28,0 chr2 225811564 . A . PASS END=225811668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,1:51:99:36:0,100,1357:0,100,255:40,0 chr2 225846924 . C . PASS END=225846927 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:28:0,84,1039:0,84,255:30,0 chr2 225846928 . A . PASS END=225846928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:29,0 chr2 225846929 . T . PASS END=225847070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:80:31:0,80,1074:0,80,255:40,0 chr2 225847071 . G . PASS END=225847078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:60:29:0,60,900:0,87,255:26,0 chr2 225847079 . A . PASS END=225847079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1002:0,48,255:19,0 chr2 225847080 . G . PASS END=225847081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:29:0,63,945:0,87,255:21,0 chr2 225847082 . C . PASS END=225847085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:48:23:0,48,720:0,69,255:18,0 chr2 225848521 . T . PASS END=225848526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,1:53:99:53:0,120,1800:0,121,255:40,0 chr2 225906969 . C . PASS END=225906977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:8:0,24,302:0,24,255:9,0 chr2 225906978 . C . PASS END=225906978 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 225906979 . T . PASS END=225906992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,304:0,27,255:9,0 chr2 225906993 . T . PASS END=225906993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:11:9:0,11,294:0,11,255:8,0 chr2 225906994 . G . PASS END=225907008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,319:0,27,255:9,0 chr2 225907009 . G . PASS END=225907010 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,357:0,30,255:10,0 chr2 225907011 . C . PASS END=225907017 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 225907018 . C . PASS END=225907018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:7,0 chr2 225907019 . T . LowGQ END=225907019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,271:0,0,255:6,0 chr2 225907020 . G . PASS END=225907022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 225907023 . C . PASS END=225907025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 225907026 . G . PASS END=225907034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,459:0,39,255:13,0 chr2 225907035 . C . PASS END=225907038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 225907039 . T . PASS END=225907039 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:13,0 chr2 225907040 . G . PASS END=225907062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 225907063 . G . PASS END=225907063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 225907064 . T . PASS END=225907065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 225907066 . A . PASS END=225907068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 225907069 . C . LowGQ END=225907069 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,433:10,0,255:12,0 chr2 225907070 . T . PASS END=225907070 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 225907071 . G . PASS END=225907071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 225907072 . C . LowGQ END=225907072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:0:15:0,0,426:10,0,255:12,0 chr2 225907073 . G . PASS END=225907073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 225907074 . G . PASS END=225907074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 225907075 . G . PASS END=225907077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,480:0,28,255:12,0 chr2 225907078 . C . LowGQ END=225907078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,380:13,0,255:11,0 chr2 225907079 . G . PASS END=225907080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 225907081 . T . PASS END=225907081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:12,0 chr2 225907082 . C . PASS END=225907082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 225907083 . A . PASS END=225907083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:11,0 chr2 225907084 . C . PASS END=225907084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,402:0,9,255:10,0 chr2 225907085 . C . PASS END=225907088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 225907089 . C . PASS END=225907089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,426:0,22,255:11,0 chr2 225907090 . A . PASS END=225907091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,451:0,39,255:13,0 chr2 226273597 . A . PASS END=226273604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:68:25:0,68,907:0,68,255:26,0 chr2 226273605 . C . PASS END=226273608 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 226273609 . A . PASS END=226273609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,992:0,70,255:27,0 chr2 226273610 . A . PASS END=226273611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 226273612 . A . PASS END=226273612 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:28,0 chr2 226273613 . T . PASS END=226273613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1080:0,90,255:30,0 chr2 226273614 . G . PASS END=226273614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:30,0 chr2 226273615 . A . PASS END=226273615 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1117:0,93,255:31,0 chr2 226273616 . T . PASS END=226273616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:30,0 chr2 226273617 . G . PASS END=226273651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:88:31:0,88,1127:0,88,255:40,0 chr2 226273652 . T . PASS END=226273688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:98:43:0,98,1476:0,98,255:40,0 chr2 226273689 . T C, 202.59 PASS DP=53;MQ=250.00;FractionInformativeReads=0.981 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,52,0:1.000,0.000:52:0,25,0:0,27,0:153:240,156,0,1958,156,1958:255,162,0:0,0:2.0259e+02,1.5259e+02,0.0000e+00,4.5000e+02,1.8736e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,31,21:0,0,26,26 chr2 226273690 . G . PASS END=226273726 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:99:51:0,120,1800:0,132,255:40,0 chr2 226273727 . G . PASS END=226273817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:93:35:0,93,1395:0,99,255:40,0 chr2 226378087 . C . PASS END=226378096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,512:0,42,255:18,0 chr2 226378097 . G . PASS END=226378113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,923:0,72,255:25,0 chr2 226378114 . C . PASS END=226378114 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 226378115 . G . PASS END=226378123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:25:0,66,990:0,75,255:26,0 chr2 226378124 . T . PASS END=226378126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:27,0 chr2 226378127 . G . PASS END=226378127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,992:0,78,255:26,0 chr2 226378128 . T . PASS END=226378136 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,898:0,81,255:29,0 chr2 226378137 . A . PASS END=226378137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1061:0,71,255:28,0 chr2 226378138 . T . PASS END=226378365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:29:0,87,1064:0,87,255:40,0 chr2 226378366 . G . PASS END=226378366 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:50:35:0,50,1186:0,50,255:30,1 chr2 226378367 . A . PASS END=226378368 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1193:0,66,255:31,1 chr2 226378369 . A . PASS END=226378371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:28,0 chr2 226378372 . C . PASS END=226378380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:78:28:0,78,1170:0,84,255:26,0 chr2 226378381 . G . PASS END=226378381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 226378382 . A . PASS END=226378382 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,978:0,67,255:26,0 chr2 226378383 . C . PASS END=226378384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1008:0,81,255:27,0 chr2 226378385 . G . PASS END=226378385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,947:0,64,255:26,0 chr2 226378386 . A . PASS END=226378388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,956:0,81,255:27,0 chr2 226446657 . C . PASS END=226446659 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:27:0,78,1170:0,81,255:26,0 chr2 226446660 . C . PASS END=226446664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:28:0,81,1133:0,84,255:31,0 chr2 226446665 . A . PASS END=226446665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1016:0,76,255:30,0 chr2 226446666 . A . PASS END=226446831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:80:31:0,80,1141:0,80,255:40,0 chr2 226446832 . C . PASS END=226446832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 226446833 . C . PASS END=226446842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:28,0 chr2 226446843 . A . PASS END=226446843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,925:0,67,255:27,0 chr2 226446844 . C . PASS END=226446852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:29,0 chr2 226446853 . A . PASS END=226446853 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:51:30:0,51,1025:0,51,255:26,0 chr2 226446854 . G . PASS END=226446876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:30:0,81,1178:0,83,255:31,0 chr2 226446877 . G . PASS END=226446877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:30,0 chr2 226446878 . G . PASS END=226446946 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:33:0,81,1142:0,81,255:38,0 chr2 226446947 . A . PASS END=226446947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:62:39:0,62,1327:0,62,255:36,0 chr2 226446948 . A . PASS END=226446956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:99:38:0,100,1366:0,100,255:39,0 chr2 226446957 . T . PASS END=226446957 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:75:41:0,75,1293:0,75,255:36,0 chr2 226446958 . C . PASS END=226447035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:80:31:0,80,1131:0,80,255:40,0 chr2 226447036 . G . PASS END=226447036 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1041:0,54,255:27,0 chr2 226447037 . C . PASS END=226447042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:72:30:0,72,1080:0,90,255:25,0 chr2 226447043 . T . PASS END=226447043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:52:30:0,52,1078:0,52,255:24,0 chr2 226447044 . T . PASS END=226447081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,66,255:26,0 chr2 226447082 . G . PASS END=226447082 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:20,0 chr2 226447083 . G . PASS END=226447087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:21,0 chr2 226447088 . C . PASS END=226447099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:43:20:0,43,586:0,43,255:19,0 chr2 226447100 . C . PASS END=226447100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 226447101 . C . PASS END=226447101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 226447102 . T . PASS END=226447117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 226447118 . C . PASS END=226447120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 226447121 . C . PASS END=226447122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 226447123 . T . PASS END=226447123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:20,0 chr2 226447124 . T . PASS END=226447126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 226447127 . C . PASS END=226447129 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,792:0,63,255:21,0 chr2 226447130 . A . PASS END=226447130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:32:21:0,32,729:0,32,255:19,0 chr2 226447131 . G . PASS END=226447134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:21:0,60,900:0,63,255:23,0 chr2 226447135 . C . PASS END=226447135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:22,0 chr2 226447136 . C . PASS END=226447141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 226447142 . C . PASS END=226447143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,731:0,52,255:22,0 chr2 226447144 . G . PASS END=226447145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 226447146 . T . PASS END=226447146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,823:0,58,255:21,0 chr2 226447147 . A . PASS END=226447148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 226447149 . T . PASS END=226447149 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,837:0,58,255:20,0 chr2 226447150 . T . PASS END=226447150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 226447151 . C . PASS END=226447151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,3:25:25:25:0,25,684:0,25,255:19,0 chr2 226447152 . C . PASS END=226447153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,798:0,42,255:21,0 chr2 226447154 . C . PASS END=226447154 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 226447155 . C . PASS END=226447155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,742:0,55,255:19,0 chr2 226447156 . C . PASS END=226447156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 226447157 . G . PASS END=226447157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,3:24:8:24:0,8,645:0,8,255:17,0 chr2 226447158 . C . PASS END=226447158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,759:0,39,255:19,0 chr2 226447159 . C . PASS END=226447159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 226447160 . C . PASS END=226447162 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:52:23:0,52,784:0,52,255:19,0 chr2 226447163 . G . LowGQ END=226447164 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,5:23:0:23:0,0,534:14,0,255:15,0 chr2 226447165 . G . PASS END=226447165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,754:0,52,255:17,0 chr2 226447166 . C . PASS END=226447166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:14:23:0,14,721:0,14,255:18,0 chr2 226447167 . A . LowGQ END=226447168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,4:22:0:22:0,0,507:0,0,255:17,0 chr2 226447169 . T . PASS END=226447170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,609:0,46,255:18,0 chr2 226447171 . C . PASS END=226447171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,670:0,24,255:18,0 chr2 226447172 . T . LowGQ END=226447172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,4:20:0:20:0,0,480:29,0,255:16,0 chr2 226447173 . C . PASS END=226447173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:19,0 chr2 226447174 . C . PASS END=226447174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 226447175 . C . PASS END=226447175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,737:0,24,255:19,0 chr2 226447176 . C . PASS END=226447177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 226447178 . A . LowGQ END=226447178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,3:21:0:21:0,0,580:9,0,255:18,0 chr2 226447179 . A . PASS END=226447180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,646:0,46,255:18,0 chr2 226447181 . T . LowGQ END=226447181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,471:56,0,255:16,0 chr2 226447182 . C . PASS END=226447182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,651:0,30,255:18,0 chr2 226447183 . C . PASS END=226447183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 226447184 . G . PASS END=226447184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,3:20:10:20:0,10,579:0,10,255:17,0 chr2 226447185 . A . PASS END=226447185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,607:0,21,255:18,0 chr2 226447186 . C . PASS END=226447186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,690:0,44,255:17,0 chr2 226447187 . G . LowGQ END=226447187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:0:20:0,0,584:10,0,255:15,0 chr2 226447188 . A . PASS END=226447188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,682:0,44,255:16,0 chr2 226447189 . G . PASS END=226447189 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,609:0,21,255:16,0 chr2 226447190 . T . PASS END=226447194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,652:0,43,255:17,0 chr2 226447195 . G . PASS END=226447195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:5:20:0,5,576:0,5,255:14,0 chr2 226447196 . C . PASS END=226447196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 226447197 . T . PASS END=226447197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:4:20:0,4,515:0,4,255:15,0 chr2 226447198 . T . PASS END=226447198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,543:0,21,255:15,0 chr2 226447199 . A . PASS END=226447199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 226447200 . C . PASS END=226447200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 226447201 . C . PASS END=226447203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,585:0,38,255:13,0 chr2 226447204 . T . LowGQ END=226447204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,512:1,0,255:12,0 chr2 226447205 . C . PASS END=226447205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 226447206 . T . PASS END=226447207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:7:19:0,7,504:0,7,255:13,0 chr2 226447208 . G . PASS END=226447209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 226447210 . G . PASS END=226447210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 226447211 . G . PASS END=226447211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,2:16:15:16:0,15,488:0,15,255:13,0 chr2 226447212 . T . PASS END=226447212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,511:0,31,255:15,0 chr2 226447213 . C . PASS END=226447213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 226447214 . A . PASS END=226447214 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 226447215 . C . PASS END=226447216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 226447217 . A . PASS END=226447217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 226447218 . A . PASS END=226447218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 226447219 . G . PASS END=226447219 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,520:0,17,255:15,0 chr2 226447220 . C . PASS END=226447221 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 226447222 . T . PASS END=226447222 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 226447223 . C . PASS END=226447229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 226447230 . T . PASS END=226447230 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 226447231 . G . PASS END=226447247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,482:0,42,255:15,0 chr2 226447248 . T . PASS END=226447248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:14,0 chr2 226447249 . G . PASS END=226447252 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,582:0,45,255:16,0 chr2 226447253 . C . PASS END=226447253 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:15,0 chr2 226447254 . A . PASS END=226447258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,554:0,51,255:18,0 chr2 226447259 . G . PASS END=226447259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 226447260 . C . PASS END=226447265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,653:0,54,255:18,0 chr2 226447266 . C . PASS END=226447266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 226447267 . G . PASS END=226447267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 226447268 . T . PASS END=226447269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 226447270 . G . PASS END=226447271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:14,0 chr2 226447272 . C . PASS END=226447279 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:16:0,39,585:0,40,255:13,0 chr2 226447280 . C . PASS END=226447282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 226447283 . C . PASS END=226447283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:14,0 chr2 226447284 . C . PASS END=226447315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:17,0 chr2 226447316 . A . PASS END=226447316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,492:0,34,255:16,0 chr2 226447317 . A . PASS END=226447343 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:16:0,41,590:0,41,255:19,0 chr2 226447344 . C . PASS END=226447344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 226447345 . C . PASS END=226447351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 226447352 . A . PASS END=226447354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,551:0,34,255:13,0 chr2 226447355 . C . PASS END=226447359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 226447360 . G . PASS END=226447370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 226447371 . C . PASS END=226447371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 226447372 . G . PASS END=226447372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 226447373 . C . LowGQ END=226447373 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:0:13:0,0,349:16,0,255:11,0 chr2 226447374 . C . PASS END=226447375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,496:0,39,255:13,0 chr2 226447376 . C . PASS END=226447376 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,433:0,23,255:12,0 chr2 226447377 . C . PASS END=226447377 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 226447378 . A . PASS END=226447378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:5:13:0,5,274:0,5,255:11,0 chr2 226447379 . C . PASS END=226447379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,488:0,39,255:13,0 chr2 226447380 . C . LowGQ END=226447380 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:11,0 chr2 226447381 . C . PASS END=226447383 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:13,0 chr2 226447384 . G . PASS END=226447384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:12,0 chr2 226447385 . T . PASS END=226447386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 226447387 . T . LowGQ END=226447388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,346:0,0,255:12,0 chr2 226447389 . C . PASS END=226447389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 226447390 . G . LowGQ END=226447390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,3:14:0:14:0,0,339:8,0,255:8,0 chr2 226447391 . C . PASS END=226447392 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:22:13:0,22,366:0,22,255:11,0 chr2 226447393 . G . PASS END=226447393 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,389:0,3,255:11,0 chr2 226447394 . T . PASS END=226447394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 226447395 . A . PASS END=226447395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,346:0,25,255:10,0 chr2 226447396 . C . PASS END=226447397 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:11,0 chr2 226447398 . G . LowGQ END=226447398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,319:14,0,255:10,0 chr2 226447399 . A . PASS END=226447399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,376:0,11,255:10,0 chr2 226447400 . A . PASS END=226447400 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,427:0,25,255:11,0 chr2 226447401 . C . PASS END=226447404 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:12:0,33,495:0,36,255:11,0 chr2 226447405 . G . LowGQ END=226447405 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,2:11:0:11:0,0,255:0,0,255:9,0 chr2 226447406 . T . PASS END=226447413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:11:0,33,313:0,33,255:12,0 chr2 226447414 . T . PASS END=226447414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,443:0,11,255:11,0 chr2 226447415 . G . PASS END=226447416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:9:14:0,9,357:0,9,255:10,0 chr2 226447417 . C . PASS END=226447427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,495:0,39,255:12,0 chr2 226447428 . G . PASS END=226447428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,380:0,22,255:11,0 chr2 226447429 . T . PASS END=226447433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,390:0,36,255:12,0 chr2 226447434 . C . PASS END=226447434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:11,0 chr2 226447435 . C . PASS END=226447436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:36:13:0,36,540:0,39,255:13,0 chr2 226447437 . C . PASS END=226447438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,435:0,25,255:12,0 chr2 226447439 . T . LowGQ END=226447439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,2:14:0:14:0,0,402:13,0,255:11,0 chr2 226447440 . C . PASS END=226447440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 226447441 . T . PASS END=226447441 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 226447442 . C . PASS END=226447444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 226447445 . T . PASS END=226447446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,465:0,3,255:12,0 chr2 226447447 . C . PASS END=226447450 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 226447451 . G . PASS END=226447451 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:11:14:0,11,413:0,11,255:12,0 chr2 226447452 . T . PASS END=226447454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,459:0,39,255:13,0 chr2 226447455 . G . PASS END=226447455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr2 226447456 . C . PASS END=226447459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,429:0,39,255:13,0 chr2 226447460 . G . PASS END=226447460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,425:0,23,255:12,0 chr2 226447461 . G . PASS END=226447467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 226447468 . C . PASS END=226447468 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:9,0 chr2 226447469 . C . PASS END=226447470 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:10,0 chr2 226447471 . G . PASS END=226447471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 226447472 . A . PASS END=226447501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,368:0,33,255:13,0 chr2 226447502 . T . PASS END=226447503 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,543:0,42,255:14,0 chr2 226447504 . C . PASS END=226447504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,471:0,26,255:13,0 chr2 226447505 . G . PASS END=226447516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:16,0 chr2 226447517 . T . PASS END=226447517 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 226447518 . C . PASS END=226447519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,651:0,51,255:17,0 chr2 226447520 . G . PASS END=226447520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:16,0 chr2 226447521 . G . PASS END=226447537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:18:0,44,676:0,44,255:19,0 chr2 226447538 . T . PASS END=226447546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,900:0,63,255:22,0 chr2 226447547 . G . PASS END=226447547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 226447548 . T . PASS END=226447556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:22,0 chr2 226447557 . C . PASS END=226447559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:23:0,57,855:0,69,255:19,0 chr2 226447560 . C . PASS END=226447570 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:23,0 chr2 226447571 . G . PASS END=226447571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,847:0,36,255:22,0 chr2 226447572 . T . PASS END=226447572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:44:25:0,44,825:0,44,255:23,0 chr2 226447573 . G . PASS END=226447583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:23,0 chr2 226447584 . G . PASS END=226447584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 226447585 . G . PASS END=226447598 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,856:0,72,255:26,0 chr2 226447599 . A . PASS END=226447599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,837:0,48,255:24,0 chr2 226447600 . C . PASS END=226447613 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 226447614 . C . PASS END=226447627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1064:0,87,255:30,0 chr2 226447628 . C . PASS END=226447628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:29,0 chr2 226447629 . C . PASS END=226447648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1096:0,90,255:30,0 chr2 226447649 . A . PASS END=226447650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 226447651 . A . PASS END=226447662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1215:0,84,255:28,0 chr2 226447663 . G . PASS END=226447663 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1069:0,71,255:28,0 chr2 226447664 . C . PASS END=226447665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 226447666 . G . PASS END=226447666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:28,0 chr2 226447667 . G . PASS END=226447667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 226447668 . A . PASS END=226447668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:26,0 chr2 226447669 . G . PASS END=226447676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 226447677 . C . PASS END=226447697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:23:0,66,847:0,68,255:26,0 chr2 226447698 . G . PASS END=226447705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,900:0,72,255:25,0 chr2 226447706 . C . PASS END=226447706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:22,0 chr2 226447707 . T . PASS END=226447717 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,831:0,69,255:23,0 chr2 226447718 . T . PASS END=226447718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 226447719 . C . PASS END=226447721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 226447722 . G . PASS END=226447734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:20:0,48,720:0,60,255:19,0 chr2 226447735 . C T, 50.00 PASS DP=20;MQ=250.00;MQRankSum=3.633;ReadPosRankSum=0.041;FractionInformativeReads=0.950;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:9,10,0:0.526,0.000:19:3,3,0:6,7,0:48:85,0,50,358,322,680:255,0,255:9,0:5.0000e+01,6.5751e-05,5.2888e+01,3.5771e+02,3.5665e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:4,5,3,7:4,5,4,6 chr2 226447736 . A . PASS END=226447739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:20:0,42,630:0,60,255:15,0 chr2 226447740 . A . PASS END=226447740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:13,0 chr2 226447741 . G . PASS END=226447750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:17,0 chr2 226447751 . A . PASS END=226447751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,553:0,15,255:17,0 chr2 226491633 . A . PASS END=226491640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,895:0,75,255:26,0 chr2 226491641 . G . PASS END=226491642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1015:0,81,255:27,0 chr2 226491643 . G . PASS END=226491643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,939:0,67,255:27,0 chr2 226491644 . G . PASS END=226491646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1017:0,84,255:29,0 chr2 226491647 . C . PASS END=226491647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1016:0,71,255:28,0 chr2 226491648 . T . PASS END=226491649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 226491650 . A . PASS END=226491658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:29:0,71,1031:0,71,255:26,0 chr2 226491659 . A . PASS END=226491666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1049:0,87,255:30,0 chr2 226491667 . C . PASS END=226491667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 226491668 . A . PASS END=226491675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:30:0,84,1260:0,90,255:30,0 chr2 226491676 . A . PASS END=226491676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:27,0 chr2 226491677 . T . PASS END=226491682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:30:0,84,1260:0,90,255:28,0 chr2 226491683 . A . PASS END=226491683 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1045:0,74,255:28,0 chr2 226491684 . A . PASS END=226491687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1056:0,87,255:29,0 chr2 226491688 . G . PASS END=226491688 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 226491689 . G . PASS END=226491706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1025:0,87,255:30,0 chr2 226491707 . C . PASS END=226491707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1084:0,74,255:27,0 chr2 226491708 . A . PASS END=226491732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:30:0,80,1133:0,80,255:31,0 chr2 226491733 . G . PASS END=226491733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 226491734 . C . PASS END=226491734 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1111:0,79,255:29,0 chr2 226491735 . C . PASS END=226491769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:88:31:0,88,1119:0,88,255:35,0 chr2 226491770 . A C, 50.00 PASS DP=39;MQ=250.00;MQRankSum=5.020;ReadPosRankSum=1.802;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:13,26,0:0.667,0.000:39:4,7,0:9,19,0:43:85,0,41,872,465,1337:255,0,255:11,0:5.0000e+01,2.2237e-04,4.3850e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:6,7,12,14:5,8,15,11 chr2 226491771 . C . PASS END=226491807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:31:0,81,1133:0,86,255:35,0 chr2 226491808 . G . PASS END=226491815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:28:0,78,1170:0,84,255:26,0 chr2 226491816 . C . PASS END=226491832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 226491833 . C . PASS END=226491833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 226491834 . A . PASS END=226491834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:24,0 chr2 226491835 . C . PASS END=226491842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:27:0,60,900:0,81,255:22,0 chr2 226516148 . A . PASS END=226516281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:87:38:0,87,1381:0,87,255:40,0 chr2 226563033 . G . PASS END=226563044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:27:0,81,980:0,81,255:33,0 chr2 226563045 . C . PASS END=226563045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:44:33:0,44,1102:0,44,255:31,0 chr2 226563046 . A . PASS END=226563259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:81:31:0,81,1157:0,82,255:40,0 chr2 226563260 . A . PASS END=226563260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1025:0,73,255:26,0 chr2 227597588 . A . PASS END=227597588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,114,1710:0,123,255:38,0 chr2 227659726 . C . PASS END=227659727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:17:0,51,629:0,51,255:17,0 chr2 227659728 . A . PASS END=227659728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:16,0 chr2 227659729 . C . PASS END=227659767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:41:17:0,41,592:0,41,255:21,0 chr2 227659768 . A . PASS END=227659770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 227659771 . G . PASS END=227659771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:21,0 chr2 227659772 . G . PASS END=227659773 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,784:0,66,255:22,0 chr2 227659774 . G . PASS END=227659775 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,737:0,49,255:21,0 chr2 227659776 . T . PASS END=227659779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 227659780 . A . PASS END=227659781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 227659782 . C . PASS END=227659782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,767:0,27,255:21,0 chr2 227659783 . C . PASS END=227659784 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:22,0 chr2 227659785 . C . PASS END=227659787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:22:0,50,759:0,50,255:19,0 chr2 227659788 . T . PASS END=227659788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 227659789 . T . PASS END=227659789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,754:0,38,255:19,0 chr2 227659790 . G . PASS END=227659790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 227659791 . A . PASS END=227659791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,784:0,38,255:19,0 chr2 227659792 . G . PASS END=227659792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 227659793 . C . PASS END=227659802 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:47:21:0,47,751:0,47,255:19,0 chr2 227659803 . A . PASS END=227659803 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:16,0 chr2 227659804 . G . PASS END=227659805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:22:0,48,720:0,66,255:16,0 chr2 227659806 . T . PASS END=227659806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,615:0,18,255:15,0 chr2 227659807 . G . PASS END=227659807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,643:0,40,255:15,0 chr2 227659808 . C . PASS END=227659808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,623:0,21,255:16,0 chr2 227659809 . T . LowGQ END=227659809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,5:21:0:21:0,0,479:34,0,255:11,0 chr2 227659810 . C . PASS END=227659810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,607:0,30,255:14,0 chr2 227659811 . T . LowGQ END=227659812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,485:0,0,255:13,0 chr2 227659813 . A . PASS END=227659813 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,537:0,24,255:14,0 chr2 227659814 . C . LowGQ END=227659814 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,574:20,0,255:14,0 chr2 227659815 . C . PASS END=227659815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,584:0,26,255:15,0 chr2 227659816 . G . PASS END=227659816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 227659817 . C . LowGQ END=227659823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,3:18:0:17:0,0,218:0,0,255:16,0 chr2 227659824 . G . PASS END=227659824 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:15,0 chr2 227659825 . G . PASS END=227659827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,637:0,40,255:17,0 chr2 227659828 . T . LowGQ END=227659829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,5:20:0:20:0,0,313:37,0,255:13,0 chr2 227659830 . G . PASS END=227659830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:13:20:0,13,651:0,13,255:16,0 chr2 227659831 . A . LowGQ END=227659832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,6:20:0:20:0,0,352:76,0,255:12,0 chr2 227659833 . G . PASS END=227659833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:18,0 chr2 227659834 . A . LowGQ END=227659834 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,7:18:0:18:0,0,266:62,0,255:11,0 chr2 227659835 . G . PASS END=227659835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 227659836 . G . PASS END=227659836 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:17,0 chr2 227659837 . G . PASS END=227659837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,660:0,54,255:18,0 chr2 227659838 . G . PASS END=227659839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:17,0 chr2 227659840 . T . LowGQ END=227659840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,7:18:0:18:0,0,260:112,0,255:11,0 chr2 227659841 . G . PASS END=227659841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 227659842 . G . PASS END=227659842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,607:0,18,255:16,0 chr2 227659843 . G . PASS END=227659843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:19:0,40,629:0,40,255:16,0 chr2 227659844 . G . PASS END=227659844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,543:0,24,255:15,0 chr2 227659845 . G . LowGQ END=227659849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,3:19:0:19:0,0,328:0,0,255:15,0 chr2 227659850 . G . PASS END=227659850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,507:0,24,255:13,0 chr2 227659851 . G . LowGQ END=227659854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,4:19:0:19:0,0,418:0,0,255:13,0 chr2 227659855 . C . PASS END=227659855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 227659856 . T . LowGQ END=227659856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,6:18:0:18:0,0,291:60,0,255:9,0 chr2 227659857 . G . PASS END=227659857 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,582:0,37,255:14,0 chr2 227659858 . C . PASS END=227659858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:18:0,45,675:0,54,255:15,0 chr2 227659859 . G . PASS END=227659859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 227659860 . G . PASS END=227659873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,590:0,48,255:16,0 chr2 227659874 . T . PASS END=227659874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 227659875 . C . PASS END=227659885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:15,0 chr2 227659886 . T . PASS END=227659886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 227659887 . G . PASS END=227659887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 227659888 . T . PASS END=227659888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,460:0,31,255:15,0 chr2 227659889 . T . PASS END=227659904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,576:0,48,255:16,0 chr2 227659905 . A . PASS END=227659906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:14,0 chr2 227659907 . T . PASS END=227659907 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 227659908 . C . PASS END=227659918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,559:0,45,255:15,0 chr2 227659919 . T . PASS END=227659929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 227659930 . A . PASS END=227659930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:3:14:0,3,419:0,3,255:13,0 chr2 227659931 . T . PASS END=227659945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 227659946 . G . PASS END=227659948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:13:0,24,360:0,39,255:9,0 chr2 227659949 . G . PASS END=227659958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:14:0,39,585:0,42,255:13,0 chr2 227659959 . G . PASS END=227659964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,503:0,42,255:14,0 chr2 227659965 . C . PASS END=227659976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:14:0,33,495:0,42,255:13,0 chr2 227659977 . G . PASS END=227659988 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,551:0,45,255:16,0 chr2 227659989 . G . PASS END=227659989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 227659990 . C . PASS END=227660078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:15:0,40,515:0,40,255:19,0 chr2 227660079 . C . PASS END=227660088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 227660089 . C . PASS END=227660099 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:20:0,47,751:0,47,255:19,0 chr2 227660100 . A . PASS END=227660101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227660102 . G . PASS END=227660102 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,2:21:30:21:0,30,659:0,30,255:19,0 chr2 227660103 . G . PASS END=227660104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227660105 . A . PASS END=227660112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:19,0 chr2 227660113 . G . PASS END=227660113 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:18,0 chr2 227660114 . C . PASS END=227660116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:50:22:0,50,759:0,50,255:19,0 chr2 227660117 . A . PASS END=227660117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,676:0,21,255:19,0 chr2 227660118 . C . PASS END=227660119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 227660120 . C . PASS END=227660133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:18,0 chr2 227660134 . T . PASS END=227660134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,3:22:16:22:0,16,679:0,16,255:16,0 chr2 227660135 . G . PASS END=227660150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:45:18:0,45,675:0,54,255:18,0 chr2 227660151 . C . PASS END=227660151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:17,0 chr2 227660152 . G . PASS END=227660165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,645:0,54,255:18,0 chr2 227660166 . G . PASS END=227660167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 227660168 . C . PASS END=227660168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,682:0,21,255:19,0 chr2 227660169 . G . PASS END=227660170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 227660171 . C . PASS END=227660203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:17:0,41,629:0,41,255:19,0 chr2 227660204 . C . PASS END=227660204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 227660205 . T . PASS END=227660228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,599:0,48,255:17,0 chr2 227660229 . T . PASS END=227660229 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,574:0,34,255:15,0 chr2 227660230 . C . PASS END=227660233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,629:0,51,255:17,0 chr2 227660234 . C . PASS END=227660234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:15,0 chr2 227660235 . G . PASS END=227660379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,551:0,45,255:18,0 chr2 227660380 . G . PASS END=227660402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 227660403 . C . PASS END=227660507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:14:0,42,432:0,42,255:19,0 chr2 227660508 . G . PASS END=227660511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 227660512 . T . PASS END=227660512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 227660513 . G . PASS END=227660547 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,792:0,63,255:22,0 chr2 227660548 . A . PASS END=227660578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:19,0 chr2 227660579 . C . PASS END=227660579 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:14,0 chr2 227660580 . C . PASS END=227660593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:18,0 chr2 227660594 . C . PASS END=227660594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,612:0,15,255:15,0 chr2 227660595 . A . PASS END=227660624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,598:0,48,255:16,0 chr2 227660625 . T . PASS END=227660625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:15,0 chr2 227660626 . C . PASS END=227660631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:17:0,48,698:0,51,255:19,0 chr2 227660632 . G . PASS END=227660650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:20:0,60,745:0,60,255:23,0 chr2 227660651 . T . PASS END=227660651 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,813:0,56,255:20,0 chr2 227660652 . C . PASS END=227660666 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,746:0,63,255:21,0 chr2 227660667 . C . PASS END=227660667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,729:0,24,255:20,0 chr2 227660668 . T . PASS END=227660678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,784:0,63,255:22,0 chr2 227660679 . G . PASS END=227660679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 227660680 . G . PASS END=227660690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:23:0,66,892:0,69,255:25,0 chr2 227660691 . T . PASS END=227660691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 227660692 . G . PASS END=227660704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,915:0,75,255:25,0 chr2 227660705 . C . PASS END=227660705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:24,0 chr2 227660706 . T . PASS END=227660722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,967:0,65,255:26,0 chr2 227660723 . C . PASS END=227660723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 227660724 . C . PASS END=227660743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:24:0,65,870:0,65,255:26,0 chr2 227660744 . T . PASS END=227660744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:23,0 chr2 227660745 . C . PASS END=227660754 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,878:0,72,255:24,0 chr2 227660755 . T . PASS END=227660755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:20,0 chr2 227660756 . T . PASS END=227660759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:21,0 chr2 227660760 . T . PASS END=227660760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 227660761 . A . PASS END=227660761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 227660762 . T . PASS END=227660762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,721:0,36,255:19,0 chr2 227660763 . T . PASS END=227660763 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,743:0,50,255:20,0 chr2 227660764 . G . PASS END=227660766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,814:0,63,255:21,0 chr2 227660767 . A . PASS END=227660777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:22:0,48,720:0,49,255:18,0 chr2 227660778 . G . PASS END=227660778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,714:0,24,255:17,0 chr2 227660779 . G . PASS END=227660817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr2 227660818 . C . PASS END=227660818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227660819 . T . PASS END=227660828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:46:21:0,46,631:0,46,255:19,0 chr2 227660829 . C . PASS END=227660831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227660832 . G . PASS END=227660832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:19,0 chr2 227660833 . G . PASS END=227660843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,731:0,60,255:21,0 chr2 227660844 . A . PASS END=227660845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:21:0,50,790:0,50,255:19,0 chr2 227660846 . G . PASS END=227660851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 227660852 . G . PASS END=227660872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,50,255:19,0 chr2 227660873 . A . PASS END=227660875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:39:18:0,39,585:0,54,255:13,0 chr2 227660876 . C . PASS END=227660951 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:41:15:0,41,543:0,41,255:16,0 chr2 227660952 . G . PASS END=227660954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:14,0 chr2 227660955 . G . PASS END=227660956 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 227660957 . T . PASS END=227660958 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,488:0,28,255:14,0 chr2 227660959 . G . PASS END=227660968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,559:0,45,255:15,0 chr2 227660969 . A . PASS END=227660976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 227660977 . C . PASS END=227660977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 227660978 . T . PASS END=227661013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,404:0,33,255:13,0 chr2 227661014 . T . PASS END=227661016 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 227661017 . C . PASS END=227661018 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 227661019 . G . PASS END=227661031 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:15:0,42,630:0,45,255:16,0 chr2 227661032 . G . PASS END=227661032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:15,0 chr2 227661033 . A . PASS END=227661037 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,560:0,48,255:16,0 chr2 227661038 . T . PASS END=227661038 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 227661039 . C . PASS END=227661048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,521:0,48,255:17,0 chr2 227661049 . T . PASS END=227661049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,2:17:18:17:0,18,526:0,18,255:13,0 chr2 227661050 . G . PASS END=227661051 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 227661052 . A . PASS END=227661065 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:42:17:0,42,630:0,51,255:19,0 chr2 227661066 . G . PASS END=227661071 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,731:0,60,255:21,0 chr2 227661072 . A . PASS END=227661072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,726:0,33,255:20,0 chr2 227661073 . G . PASS END=227661077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,786:0,66,255:23,0 chr2 227661078 . T . PASS END=227661078 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 227661079 . G . PASS END=227661116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,731:0,63,255:24,0 chr2 227661117 . G . PASS END=227661117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:23,0 chr2 227661118 . C . PASS END=227661118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227661119 . T . PASS END=227661119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 227661120 . C . PASS END=227661122 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227661123 . C . PASS END=227661123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:23,0 chr2 227661124 . G . PASS END=227661126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227661127 . G . PASS END=227661127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,869:0,36,255:22,0 chr2 227661128 . C . PASS END=227661147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:21:0,63,784:0,63,255:22,0 chr2 227661148 . T . PASS END=227661148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 227661149 . C . PASS END=227661150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 227661151 . T . PASS END=227661151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,759:0,50,255:20,0 chr2 227661152 . G . PASS END=227661156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,945:0,66,255:22,0 chr2 227661157 . T . PASS END=227661165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:21:0,57,855:0,63,255:19,0 chr2 227661166 . G . PASS END=227661168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 227661169 . G . PASS END=227661170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 227661171 . G . PASS END=227661172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227661173 . A . PASS END=227661175 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 227661176 . G . PASS END=227661184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227661185 . T . PASS END=227661191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 227661192 . C . PASS END=227661192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227661193 . C . PASS END=227661209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:19:0,44,682:0,44,255:19,0 chr2 227661210 . A . PASS END=227661210 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:14,0 chr2 227661211 . G . PASS END=227661225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:44:18:0,44,720:0,44,255:19,0 chr2 227661226 . G . PASS END=227661235 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,739:0,60,255:22,0 chr2 227661236 . T . PASS END=227661236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,723:0,49,255:21,0 chr2 227661237 . C . PASS END=227661238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,823:0,66,255:22,0 chr2 227661239 . C . PASS END=227661239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:21,0 chr2 227661240 . C . PASS END=227661241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,808:0,66,255:22,0 chr2 227661242 . A . PASS END=227661243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,767:0,50,255:21,0 chr2 227661244 . T . PASS END=227661251 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:21,0 chr2 227661252 . T . PASS END=227661258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:48:21:0,48,720:0,63,255:17,0 chr2 227661259 . G . PASS END=227661262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 227661263 . T . PASS END=227661263 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 227661264 . C . PASS END=227661265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 227661266 . C . PASS END=227661266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,734:0,33,255:18,0 chr2 227661267 . C . PASS END=227661271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,729:0,60,255:20,0 chr2 227661272 . C . PASS END=227661286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:19:0,43,660:0,43,255:19,0 chr2 227661287 . C . PASS END=227661287 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:19,0 chr2 227661288 . C . PASS END=227661288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:43:20:0,43,676:0,43,255:19,0 chr2 227661289 . A . PASS END=227661289 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,759:0,60,255:20,0 chr2 227661290 . C . PASS END=227661290 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 227661291 . C . PASS END=227661291 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 227661292 . G . PASS END=227661292 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,704:0,44,255:19,0 chr2 227661293 . C . PASS END=227661296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,709:0,60,255:21,0 chr2 227661297 . T . PASS END=227661297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,674:0,46,255:20,0 chr2 227661298 . C . PASS END=227661307 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 227661308 . G . PASS END=227661308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:21,0 chr2 227661309 . G . PASS END=227661315 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 227661316 . G . PASS END=227661316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:21,0 chr2 227661317 . T . PASS END=227661337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,763:0,69,255:23,0 chr2 227661338 . T . PASS END=227661338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,823:0,33,255:21,0 chr2 227661339 . G . PASS END=227661339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 227661340 . G . PASS END=227661340 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 227661341 . C . PASS END=227661354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,69,255:23,0 chr2 227661355 . T . PASS END=227661355 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,2:23:36:23:0,36,743:0,36,255:18,0 chr2 227661356 . G . PASS END=227661359 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 227661360 . A . PASS END=227661365 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:53:21:0,53,810:0,53,255:19,0 chr2 227661366 . T . PASS END=227661371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:24:0,60,900:0,72,255:21,0 chr2 227661372 . A . PASS END=227661372 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,762:0,52,255:20,0 chr2 227661373 . G . PASS END=227661387 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,831:0,66,255:23,0 chr2 227661388 . G . PASS END=227661388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:20,0 chr2 227661389 . A . PASS END=227661394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 227661395 . T . PASS END=227661424 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:47:19:0,47,706:0,47,255:19,0 chr2 227661425 . C . PASS END=227661429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 227661430 . A . PASS END=227661430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:19,0 chr2 227661431 . A . PASS END=227661431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227661432 . T . PASS END=227661432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 227661433 . G . PASS END=227661433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227661434 . T . PASS END=227661445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 227661446 . C . PASS END=227661446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 227661447 . C . PASS END=227661485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:16:0,41,582:0,41,255:19,0 chr2 227661486 . C . PASS END=227661487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 227661488 . C . PASS END=227661502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,551:0,45,255:15,0 chr2 227661503 . C . PASS END=227661541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:30:11:0,30,382:0,33,255:13,0 chr2 227661542 . T . PASS END=227661542 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,335:0,19,255:10,0 chr2 227661543 . T . PASS END=227661553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,410:0,33,255:11,0 chr2 227661554 . G . PASS END=227661576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:18,0 chr2 227661577 . T . PASS END=227661577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,620:0,37,255:17,0 chr2 227661578 . C . PASS END=227661588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,660:0,54,255:19,0 chr2 227661589 . C . PASS END=227661592 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 227661593 . G . PASS END=227661599 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:44:20:0,44,704:0,44,255:19,0 chr2 227661600 . C . PASS END=227661600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:38:23:0,38,822:0,38,255:21,0 chr2 227661601 . C . PASS END=227661610 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 227661611 . A . PASS END=227661611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 227661612 . T . PASS END=227661631 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,893:0,72,255:26,0 chr2 227661632 . G . PASS END=227661632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:25,0 chr2 227661633 . T . PASS END=227661633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,978:0,78,255:26,0 chr2 227661634 . G . PASS END=227661634 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 227661635 . T . PASS END=227661668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,767:0,60,255:26,0 chr2 227661669 . C . PASS END=227661669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:19,0 chr2 227661670 . C . PASS END=227661672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 227661673 . A . PASS END=227661674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 227661675 . G . PASS END=227661690 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 227661691 . T . PASS END=227661715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:19,0 chr2 227661716 . C . PASS END=227661716 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,507:0,12,255:14,0 chr2 227661717 . G . PASS END=227661735 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,630:0,45,255:15,0 chr2 227661736 . G . PASS END=227661738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 227661739 . C . PASS END=227661752 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:15,0 chr2 227661753 . G . PASS END=227661760 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 227661761 . C . PASS END=227661776 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:17,0 chr2 227661777 . G . PASS END=227661777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 227661778 . T . PASS END=227661816 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:40:16:0,40,590:0,40,255:18,0 chr2 227661817 . A . PASS END=227661817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:16,0 chr2 227661818 . G . PASS END=227661818 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:16,0 chr2 227661819 . C . PASS END=227661839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:18:0,42,630:0,54,255:18,0 chr2 227661840 . T . PASS END=227661840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,596:0,24,255:15,0 chr2 227661841 . C . PASS END=227661882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,659:0,41,255:19,0 chr2 227661883 . T . PASS END=227661893 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:20,0 chr2 227661894 . A . PASS END=227661895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 227661896 . C . PASS END=227661897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227661898 . A . PASS END=227661908 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:50:21:0,50,775:0,50,255:19,0 chr2 227661909 . C . PASS END=227661912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:65:25:0,65,961:0,65,255:23,0 chr2 227661913 . A . PASS END=227661913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,890:0,59,255:21,0 chr2 227661914 . G . PASS END=227661922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:24,0 chr2 227661923 . G . PASS END=227661923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 227661924 . C . PASS END=227661930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 227661931 . C . PASS END=227661931 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:22,0 chr2 227661932 . C . PASS END=227661933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,1035:0,72,255:23,0 chr2 227661934 . A . PASS END=227661934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 227661935 . G . PASS END=227661943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,876:0,69,255:23,0 chr2 227661944 . G . PASS END=227661944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 227661945 . G . PASS END=227661970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,878:0,69,255:24,0 chr2 227661971 . G . PASS END=227661975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 227661976 . G . PASS END=227661986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:68:28:0,68,1006:0,68,255:26,0 chr2 227661987 . T . PASS END=227661987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1024:0,48,255:25,0 chr2 227661988 . G . PASS END=227661991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:26,0 chr2 227661992 . C . PASS END=227661993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 227661994 . C . PASS END=227662024 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,825:0,67,255:26,0 chr2 227662025 . G . PASS END=227662025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,861:0,58,255:22,0 chr2 227662026 . T . PASS END=227662042 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:24,0 chr2 227662043 . T . PASS END=227662043 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:22,0 chr2 227662044 . T . PASS END=227662044 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 227662045 . G . PASS END=227662045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 227662046 . C . PASS END=227662048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:22,0 chr2 227662049 . C . PASS END=227662053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:48:23:0,48,720:0,52,255:17,0 chr2 227662054 . G . PASS END=227662056 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:39:23:0,39,585:0,69,255:13,0 chr2 227662057 . G . PASS END=227662063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:19:0,42,630:0,57,255:15,0 chr2 227662064 . T . PASS END=227662066 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:15:0,32,557:0,32,255:13,0 chr2 227662067 . C . PASS END=227662096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,543:0,44,255:19,0 chr2 227662097 . G . PASS END=227662104 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:21:0,63,770:0,63,255:23,0 chr2 227662105 . C . PASS END=227662106 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,784:0,52,255:22,0 chr2 227662107 . G . PASS END=227662107 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,853:0,69,255:23,0 chr2 227662108 . G . PASS END=227662108 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,836:0,53,255:22,0 chr2 227662109 . G . PASS END=227662115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,817:0,69,255:23,0 chr2 227662116 . G . PASS END=227662116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 227662117 . A . PASS END=227662131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,945:0,69,255:22,0 chr2 227662132 . G . PASS END=227662132 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 227662133 . G . PASS END=227662133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 227662134 . A . PASS END=227662134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 227662135 . A . PASS END=227662142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,847:0,69,255:24,0 chr2 227662143 . A . PASS END=227662143 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:23,0 chr2 227662144 . A . PASS END=227662146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 227662147 . G . PASS END=227662147 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 227662148 . C . PASS END=227662150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,864:0,72,255:24,0 chr2 227662151 . G . PASS END=227662151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:22,0 chr2 227662152 . G . PASS END=227662157 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:25:0,72,1047:0,74,255:27,0 chr2 227662158 . A . PASS END=227662180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1133:0,80,255:31,0 chr2 227662181 . A . PASS END=227662181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:76:31:0,76,1072:0,76,255:30,0 chr2 227662182 . A . PASS END=227662182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 227662183 . A . PASS END=227662183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1131:0,77,255:30,0 chr2 227662184 . C . PASS END=227662187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 227662188 . C . PASS END=227662188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:29,0 chr2 227662189 . A . PASS END=227662200 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1147:0,80,255:32,0 chr2 227662201 . A . PASS END=227662201 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:41:32:0,41,1039:0,41,255:30,0 chr2 227662202 . C . PASS END=227662305 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:80:32:0,80,1123:0,80,255:38,0 chr2 227662306 . C . PASS END=227662306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1210:0,63,255:28,0 chr2 227662307 . G . PASS END=227662357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:81:31:0,81,1194:0,83,255:35,0 chr2 227662358 . T . PASS END=227662363 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:74:30:0,74,1063:0,74,255:26,0 chr2 227662364 . C . PASS END=227662364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:53:28:0,53,994:0,53,255:25,0 chr2 227662365 . G . PASS END=227662389 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:63:24:0,63,945:0,72,255:25,0 chr2 227662390 . G . PASS END=227662390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:57:24:0,57,855:0,72,255:19,0 chr2 227662391 . T . PASS END=227662395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 227662396 . T . PASS END=227662413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:19:0,51,706:0,57,255:19,0 chr2 227662414 . C . PASS END=227662415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,707:0,60,255:20,0 chr2 227662416 . C . PASS END=227662427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,57,255:18,0 chr2 227662428 . C . PASS END=227662428 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,645:0,26,255:17,0 chr2 227662429 . C . PASS END=227662431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 227662432 . C . PASS END=227662432 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,651:0,26,255:17,0 chr2 227662433 . G . PASS END=227662433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:19:0,54,810:0,57,255:18,0 chr2 227662434 . A . PASS END=227662434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,660:0,21,255:18,0 chr2 227662435 . G . PASS END=227662463 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:42:15:0,42,630:0,44,255:19,0 chr2 227662464 . C . PASS END=227662465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 227662466 . C . PASS END=227662495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,621:0,48,255:17,0 chr2 227662496 . T . PASS END=227662496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 227662497 . T . PASS END=227662538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:17:0,40,613:0,40,255:19,0 chr2 227662539 . C . PASS END=227662540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:39:19:0,39,585:0,57,255:13,0 chr2 227662541 . G . PASS END=227662551 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,629:0,40,255:17,0 chr2 227662552 . G . PASS END=227662552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,551:0,12,255:16,0 chr2 227662553 . C . PASS END=227662555 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,582:0,51,255:17,0 chr2 227662556 . G . PASS END=227662556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 227662557 . T . PASS END=227662558 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,635:0,51,255:17,0 chr2 227662559 . A . PASS END=227662559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:15,0 chr2 227662560 . G . PASS END=227662565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:16,0 chr2 227662566 . C . PASS END=227662566 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,588:0,35,255:14,0 chr2 227662567 . C . PASS END=227662567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:15,0 chr2 227662568 . T . PASS END=227662568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,582:0,34,255:14,0 chr2 227662569 . G . PASS END=227662572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 227662573 . G . PASS END=227662574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:31:16:0,31,535:0,31,255:14,0 chr2 227662575 . G . PASS END=227662585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:15:0,45,507:0,45,255:17,0 chr2 227662586 . T . PASS END=227662586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,627:0,38,255:17,0 chr2 227662587 . T . PASS END=227662587 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,623:0,54,255:18,0 chr2 227662588 . G . PASS END=227662588 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:17,0 chr2 227662589 . A . PASS END=227662616 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:44:18:0,44,631:0,44,255:19,0 chr2 227662617 . T . PASS END=227662618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,715:0,60,255:20,0 chr2 227662619 . G . PASS END=227662619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:44:20:0,44,720:0,44,255:18,0 chr2 227662620 . G . PASS END=227662622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 227662623 . T . PASS END=227662623 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,745:0,27,255:20,0 chr2 227662624 . A . PASS END=227662627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 227662628 . C . PASS END=227662628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,701:0,27,255:20,0 chr2 227662629 . A . PASS END=227662632 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,748:0,66,255:22,0 chr2 227662633 . G . PASS END=227662633 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 227662634 . G . PASS END=227662638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,853:0,69,255:23,0 chr2 227662639 . G . PASS END=227662639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:20,0 chr2 227662640 . G . PASS END=227662642 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 227662643 . T . PASS END=227662643 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,884:0,59,255:22,0 chr2 227662644 . G . PASS END=227662646 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 227662647 . T . PASS END=227662647 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,748:0,58,255:22,0 chr2 227662648 . C . PASS END=227662648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,922:0,72,255:24,0 chr2 227662649 . T . PASS END=227662650 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 227662651 . G . PASS END=227662652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:24,0 chr2 227662653 . T . PASS END=227662654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:23,0 chr2 227662655 . C . PASS END=227662655 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,808:0,33,255:23,0 chr2 227662656 . G . PASS END=227662656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,908:0,72,255:24,0 chr2 227662657 . A . PASS END=227662657 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,829:0,56,255:23,0 chr2 227662658 . G . PASS END=227662658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr2 227662659 . G . PASS END=227662661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:61:26:0,61,900:0,61,255:26,0 chr2 227662662 . G . PASS END=227662662 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,2:26:31:26:0,31,867:0,31,255:24,0 chr2 227662663 . G . PASS END=227662669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr2 227662670 . T . PASS END=227662670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,977:0,50,255:25,0 chr2 227662671 . C . PASS END=227662689 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:26:0,65,945:0,65,255:26,0 chr2 227662690 . C . PASS END=227662696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 227662697 . A . PASS END=227662697 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:27,0 chr2 227662698 . T . PASS END=227662708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:30,0 chr2 227662709 . A . PASS END=227662710 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:25,0 chr2 227662711 . G . PASS END=227662719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:81:33:0,81,1215:0,99,255:28,0 chr2 227662720 . C . PASS END=227662790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:23:0,63,801:0,69,255:26,0 chr2 227662791 . A . PASS END=227662791 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:22,0 chr2 227662792 . G . PASS END=227662807 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,868:0,66,255:23,0 chr2 227662808 . T . PASS END=227662808 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:21,0 chr2 227662809 . G . PASS END=227662831 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,815:0,66,255:23,0 chr2 227662832 . A . PASS END=227662832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,776:0,52,255:21,0 chr2 227662833 . G . PASS END=227662850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:22,0 chr2 227662851 . C . PASS END=227662851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,831:0,55,255:20,0 chr2 227662852 . T . PASS END=227662852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 227662853 . G . PASS END=227662888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:51:19:0,51,765:0,53,255:19,0 chr2 227662889 . C . PASS END=227662892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,798:0,63,255:21,0 chr2 227662893 . T . PASS END=227662902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:47:21:0,47,729:0,47,255:19,0 chr2 227662903 . G . PASS END=227662914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:23:0,63,847:0,69,255:23,0 chr2 227662915 . A . PASS END=227662917 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,772:0,55,255:22,0 chr2 227662918 . C . PASS END=227662919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:23,0 chr2 227662920 . G . PASS END=227662920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,868:0,59,255:20,0 chr2 227662921 . G . PASS END=227662922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:24:0,63,945:0,72,255:21,0 chr2 227662923 . T . PASS END=227662923 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,740:0,55,255:20,0 chr2 227662924 . C . PASS END=227662924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 227662925 . T . PASS END=227662925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,715:0,52,255:20,0 chr2 227662926 . T . PASS END=227662939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:23,0 chr2 227662940 . C . PASS END=227662940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 227662941 . C . PASS END=227662948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:23,0 chr2 227662949 . T . PASS END=227662949 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,782:0,53,255:21,0 chr2 227662950 . T . PASS END=227662952 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 227662953 . G . PASS END=227662953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:41:24:0,41,816:0,41,255:22,0 chr2 227662954 . G . PASS END=227662954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 227662955 . A . PASS END=227662955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:22,0 chr2 227662956 . T . PASS END=227662963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,847:0,69,255:23,0 chr2 227662964 . C . PASS END=227662964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,853:0,56,255:21,0 chr2 227662965 . A . PASS END=227662965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 227662966 . G . PASS END=227662966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,2:24:39:24:0,39,745:0,39,255:21,0 chr2 227662967 . A . PASS END=227662991 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:24:0,62,914:0,62,255:26,0 chr2 227662992 . G . PASS END=227662996 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 227662997 . T . PASS END=227662997 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,893:0,50,255:26,0 chr2 227662998 . C . PASS END=227662998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1025:0,84,255:28,0 chr2 227662999 . A . PASS END=227662999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 227663000 . C . PASS END=227663002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1033:0,84,255:28,0 chr2 227663003 . T . PASS END=227663003 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1023:0,71,255:28,0 chr2 227663004 . A . PASS END=227663020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:80:29:0,80,1070:0,80,255:31,0 chr2 227663021 . G . PASS END=227663021 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:29,0 chr2 227663022 . C . PASS END=227663027 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1117:0,90,255:30,0 chr2 227663028 . C . PASS END=227663028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:59:30:0,59,1027:0,59,255:29,0 chr2 227663029 . A . PASS END=227663045 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:66:25:0,66,990:0,74,255:26,0 chr2 227663046 . T . PASS END=227663046 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,869:0,58,255:22,0 chr2 227663047 . G . PASS END=227663053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,990:0,72,255:23,0 chr2 227663054 . C . PASS END=227663054 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:21,0 chr2 227663055 . C . PASS END=227663060 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 227663061 . C . PASS END=227663061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:21,0 chr2 227663062 . A . PASS END=227663062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:24:0,66,990:0,72,255:22,0 chr2 227663063 . C . PASS END=227663063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:21,0 chr2 227663064 . C . PASS END=227663073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,800:0,66,255:22,0 chr2 227663074 . G . PASS END=227663074 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:20,0 chr2 227663075 . A . PASS END=227663075 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,2:22:33:22:0,33,712:0,33,255:19,0 chr2 227663076 . G . PASS END=227663089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,831:0,66,255:22,0 chr2 227663090 . T . PASS END=227663115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:19:0,48,720:0,50,255:19,0 chr2 227663116 . C . PASS END=227663118 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:20:0,36,540:0,60,255:13,0 chr2 227663119 . C . PASS END=227663126 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:20:0,45,675:0,46,255:15,0 chr2 227663127 . G . PASS END=227663127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:13,0 chr2 227663128 . A . PASS END=227663130 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:16,0 chr2 227663131 . C . PASS END=227663131 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,582:0,12,255:14,0 chr2 227663132 . T . PASS END=227663140 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:15,0 chr2 227663141 . C . PASS END=227663141 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,527:0,9,255:14,0 chr2 227663142 . T . PASS END=227663142 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,433:0,12,255:12,0 chr2 227663143 . G . PASS END=227663150 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 227663151 . C . PASS END=227663151 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,590:0,37,255:15,0 chr2 227663152 . G . PASS END=227663155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:16,0 chr2 227663156 . T . PASS END=227663166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:14:0,39,585:0,42,255:13,0 chr2 227663167 . C . PASS END=227663167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:12,0 chr2 227663168 . G . PASS END=227663168 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 227663169 . C . PASS END=227663169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,480:0,26,255:12,0 chr2 227663170 . G . PASS END=227663170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 227663171 . A . PASS END=227663171 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:12,0 chr2 227663172 . T . PASS END=227663184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,399:0,39,255:13,0 chr2 227663185 . G . PASS END=227663195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:15,0 chr2 227663196 . A . PASS END=227663196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,512:0,31,255:14,0 chr2 227663197 . G . PASS END=227663197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 227663198 . A . PASS END=227663198 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:17:16:0,17,476:0,17,255:14,0 chr2 227663199 . G . PASS END=227663202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:17:0,48,720:0,51,255:16,0 chr2 227663203 . C . PASS END=227663203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 227663204 . A . PASS END=227663206 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,582:0,48,255:16,0 chr2 227663207 . A . PASS END=227663207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,557:0,32,255:15,0 chr2 227663208 . G . PASS END=227663236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,568:0,48,255:18,0 chr2 227663237 . T . PASS END=227663237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,574:0,37,255:16,0 chr2 227663238 . T . PASS END=227663241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:17:0,48,720:0,51,255:17,0 chr2 227663242 . G . PASS END=227663242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,635:0,38,255:16,0 chr2 227663243 . T . PASS END=227663245 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 227663246 . A . PASS END=227663246 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,619:0,38,255:16,0 chr2 227663247 . A . PASS END=227663249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 227663250 . A . PASS END=227663250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:14,0 chr2 227663251 . G . PASS END=227663258 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:49:19:0,49,737:0,49,255:19,0 chr2 227663259 . G . PASS END=227663259 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:35:22:0,35,783:0,35,255:18,0 chr2 227663260 . G . PASS END=227663270 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:50:19:0,50,782:0,50,255:19,0 chr2 227663271 . G . PASS END=227663271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:26:19:0,26,667:0,26,255:17,0 chr2 227663272 . T . PASS END=227663281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,676:0,54,255:18,0 chr2 227663282 . C . PASS END=227663282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:23:18:0,23,598:0,23,255:16,0 chr2 227663283 . T . PASS END=227663285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 227663286 . A . PASS END=227663286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:21:18:0,21,579:0,21,255:15,0 chr2 227663287 . C . PASS END=227663321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:16:0,42,568:0,48,255:17,0 chr2 227663322 . C . PASS END=227663322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,565:0,32,255:13,0 chr2 227663323 . G . PASS END=227663333 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 227663334 . G . PASS END=227663337 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 227663338 . C . PASS END=227663339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 227663340 . C . PASS END=227663345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:36:16:0,36,540:0,48,255:13,0 chr2 227663346 . C . PASS END=227663358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,520:0,42,255:14,0 chr2 227663359 . C . PASS END=227663384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,443:0,36,255:13,0 chr2 227663385 . T . PASS END=227663385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,365:0,19,255:11,0 chr2 227663386 . C . PASS END=227663398 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:12:0,30,413:0,36,255:12,0 chr2 227663399 . A . PASS END=227663399 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:27:13:0,27,405:0,39,255:9,0 chr2 227663400 . G . PASS END=227663454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:11:0,30,421:0,33,255:13,0 chr2 227669041 . G . PASS END=227669041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 227729410 . A . PASS END=227729410 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1078:0,84,255:28,0 chr2 227729411 . T . PASS END=227729411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,986:0,67,255:27,0 chr2 227729412 . G . PASS END=227729842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:84:28:0,84,1033:0,84,255:40,0 chr2 227731902 . G . PASS END=227732034 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:87:39:0,87,1305:0,87,255:40,0 chr2 227771441 . A . PASS END=227771597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:93:46:0,93,1395:0,97,255:40,0 chr2 227773538 . G . PASS END=227773594 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:79,0:79:99:74:0,120,1800:0,195,255:40,0 chr2 227778924 . G . PASS END=227779067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:84:38:0,84,1260:0,89,255:40,0 chr2 227788785 . C . PASS END=227788858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:112,0:112:99:94:0,120,1800:0,255,255:40,0 chr2 227835289 . T . PASS END=227835347 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:53:0,120,1800:0,149,255:40,0 chr2 227844871 . T . PASS END=227844899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:59:0,120,1800:0,173,255:40,0 chr2 227846940 . C . PASS END=227846986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:61,0:61:99:57:0,120,1800:0,147,255:40,0 chr2 227853048 . G . PASS END=227853057 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,981:0,84,255:29,0 chr2 227853058 . T . PASS END=227853058 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1055:0,74,255:28,0 chr2 227853059 . C . PASS END=227853061 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 227853062 . A . PASS END=227853062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1063:0,74,255:28,0 chr2 227853063 . A . PASS END=227853063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 227853064 . A . LowGQ END=227853064 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,6:31:0:31:0,0,698:21,0,255:25,0 chr2 227853065 . G . PASS END=227853067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:31,0 chr2 227853068 . A . PASS END=227853068 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1042:0,79,255:30,0 chr2 227853069 . C . PASS END=227853163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:80:32:0,80,1166:0,80,255:40,0 chr2 227860147 . G . PASS END=227860238 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:81:34:0,81,1227:0,81,255:40,0 chr2 227867442 . A . PASS END=227867442 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 227867458 . T . PASS END=227867458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227867496 . T . PASS END=227867496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1101:0,80,255:29,0 chr2 227867507 . A . PASS END=227867507 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:96:33:0,96,1440:0,99,255:32,0 chr2 227867543 . A . PASS END=227867543 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 227867648 . C . PASS END=227867648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 227867656 . T . PASS END=227867656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 227867672 . G . PASS END=227867672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 227867678 . C . PASS END=227867678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1033:0,73,255:27,0 chr2 227867694 . G . PASS END=227867694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:62:31:0,62,1102:0,62,255:28,0 chr2 227867847 . G . PASS END=227867847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,994:0,81,255:27,0 chr2 227867868 . T . PASS END=227867868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 227867906 . T . PASS END=227867906 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:37:0,81,1215:0,111,255:27,0 chr2 227867935 . G . PASS END=227867935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1041:0,84,255:28,0 chr2 227867938 . T . PASS END=227867938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 227868000 . T . PASS END=227868000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:90:37:0,90,1350:0,111,255:30,0 chr2 227868035 . C . PASS END=227868035 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1119:0,90,255:30,0 chr2 227868093 . G . PASS END=227868093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1148:0,93,255:31,0 chr2 227868101 . A . PASS END=227868101 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1147:0,80,255:31,0 chr2 227868103 . T . PASS END=227868103 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1094:0,79,255:31,0 chr2 227868165 . C . PASS END=227868165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 227868250 . T . PASS END=227868250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,114,1710:0,126,255:38,0 chr2 227868329 . A . PASS END=227868329 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 227868402 . A . PASS END=227868402 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 227868574 . G . PASS END=227868574 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 227868580 . T . PASS END=227868580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:46:0,120,1800:0,138,255:40,0 chr2 227868629 . C . PASS END=227868629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,114,1413:0,114,255:38,0 chr2 227868644 . A . PASS END=227868644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:37:0,93,1395:0,111,255:31,0 chr2 227868687 . G . PASS END=227868687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 227868742 . T . PASS END=227868742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1148:0,83,255:27,0 chr2 227868772 . T . PASS END=227868772 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1103:0,90,255:30,0 chr2 227868882 . G . PASS END=227868882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 227868885 . T . PASS END=227868885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:75:29:0,75,1125:0,87,255:25,0 chr2 227869079 . T . PASS END=227869079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:75:27:0,75,1125:0,81,255:25,0 chr2 227869096 . A . PASS END=227869096 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:27:0,69,1035:0,81,255:23,0 chr2 227869186 . G . PASS END=227869186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 227869192 . C . PASS END=227869192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,598:0,48,255:16,0 chr2 227869234 . A . PASS END=227869234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,753:0,60,255:20,0 chr2 227869309 . G . PASS END=227869309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1350:0,93,255:30,0 chr2 227869364 . A . PASS END=227869364 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1279:0,99,255:33,0 chr2 227869394 . G . PASS END=227869394 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:32:0,90,1350:0,96,255:30,0 chr2 227869554 . G . PASS END=227869554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1089:0,93,255:31,0 chr2 227869619 . A . PASS END=227869619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 227869782 . C . PASS END=227869782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1088:0,90,255:30,0 chr2 227869920 . G . LowGQ END=227869920 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,6:33:0:33:0,0,820:89,0,255:26,6 chr2 227869972 . A . PASS END=227869972 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 227870008 . C . PASS END=227870008 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:55:0,120,1800:0,165,255:40,0 chr2 227870020 . T . PASS END=227870020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 227870081 . G . PASS END=227870081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,99,1485:0,117,255:33,0 chr2 227870111 . A . PASS END=227870111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1078:0,77,255:27,0 chr2 227870127 . T . PASS END=227870127 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 227870239 . A . PASS END=227870239 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1231:0,86,255:32,0 chr2 227870354 . A . PASS END=227870354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 227870577 . T . PASS END=227870577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,102,1203:0,102,255:34,0 chr2 227870618 . A . PASS END=227870618 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:99:61:0,120,1800:0,150,255:40,0 chr2 227870644 . T . PASS END=227870644 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,176,255:40,0 chr2 227870692 . T . PASS END=227870692 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:67:0,120,1800:0,185,255:40,0 chr2 227870695 . A . PASS END=227870695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:67:0,120,1800:0,201,255:40,0 chr2 227870749 . T . PASS END=227870749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,1:61:99:61:0,120,1800:0,167,255:40,0 chr2 227870799 . G . PASS END=227870799 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,1:63:99:63:0,120,1800:0,173,255:40,0 chr2 227870851 . C . PASS END=227870851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 227870868 . A . PASS END=227870868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 227870870 . G . PASS END=227870870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 227870929 . C . PASS END=227870929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,1:49:99:49:0,120,1800:0,131,255:40,0 chr2 227870967 . T . PASS END=227870967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:53:0,120,1800:0,159,255:40,0 chr2 227870977 . C . PASS END=227870977 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:49,1:50:99:50:0,120,1800:0,134,255:40,0 chr2 227871015 . C . PASS END=227871015 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:99:37:0,99,1485:0,111,255:33,0 chr2 227871110 . G . PASS END=227871110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:23:0,63,945:0,69,255:21,0 chr2 227871153 . C . PASS END=227871153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 227871158 . G . PASS END=227871158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 227871177 . G . PASS END=227871178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227871182 . T . PASS END=227871182 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 227871184 . C . PASS END=227871184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:21,0 chr2 227871208 . G . PASS END=227871208 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 227871286 . A . PASS END=227871286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 227871294 . A . PASS END=227871294 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,99,1485:0,108,255:33,0 chr2 227871336 . A . PASS END=227871336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 227871472 . G . PASS END=227871472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,1:43:93:43:0,93,1395:0,113,255:31,0 chr2 227871550 . T . PASS END=227871550 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,168,255:40,0 chr2 227871696 . A . PASS END=227871696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:96:35:0,96,1440:0,105,255:32,0 chr2 227871720 . T . PASS END=227871720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 227871723 . A . PASS END=227871723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:99:34:0,99,1485:0,102,255:33,0 chr2 227871797 . G . PASS END=227871797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,99,1485:0,114,255:33,0 chr2 227871819 . G . PASS END=227871819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:96:37:0,96,1440:0,111,255:32,0 chr2 227871913 . C . PASS END=227871913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 227871993 . C . PASS END=227871993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:52,0:52:99:52:0,120,1800:0,156,255:40,0 chr2 227872019 . G . PASS END=227872019 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:99:47:0,120,1800:0,141,255:40,0 chr2 227872041 . C . PASS END=227872072 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:84:31:0,84,1260:0,93,255:35,0 chr2 227872073 . T . PASS END=227872073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1124:0,77,255:27,0 chr2 227872074 . G . PASS END=227872077 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 227872078 . T . PASS END=227872079 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:78:30:0,78,1170:0,90,255:26,0 chr2 227872080 . C . PASS END=227872080 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 227872081 . T . PASS END=227872083 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:75:30:0,75,1125:0,90,255:26,0 chr2 227872084 . C . PASS END=227872092 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:31:0,80,1147:0,80,255:28,0 chr2 227872093 . T . PASS END=227872093 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 227872094 . G . PASS END=227872097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:27,0 chr2 227872098 . T . PASS END=227872120 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:26:0,72,1080:0,78,255:26,0 chr2 227872121 . G . PASS END=227872133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1063:0,84,255:29,0 chr2 227872134 . C . PASS END=227872134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 227872135 . T . PASS END=227872227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:84:31:0,84,1170:0,86,255:37,0 chr2 227872228 . G . PASS END=227872228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1304:0,72,255:35,0 chr2 227872229 . C . PASS END=227872266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:80:32:0,80,1155:0,80,255:33,0 chr2 227872267 . A . PASS END=227872282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:26:0,60,900:0,65,255:26,0 chr2 227872283 . C . PASS END=227872283 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:20,0 chr2 227872284 . T . PASS END=227872286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:21,0 chr2 227872287 . G . PASS END=227872296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:20:0,54,810:0,60,255:19,0 chr2 227872297 . C . PASS END=227872297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:29:20:0,29,676:0,29,255:16,0 chr2 227872298 . C . PASS END=227872304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:51:18:0,51,765:0,54,255:17,0 chr2 227872563 . T . PASS END=227872567 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,801:0,72,255:24,0 chr2 227872568 . A . PASS END=227872568 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:23,0 chr2 227872569 . G . PASS END=227872571 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227872572 . A . PASS END=227872572 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,756:0,58,255:23,0 chr2 227872573 . A . PASS END=227872578 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:25:0,72,1080:0,75,255:25,0 chr2 227872579 . C . PASS END=227872580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 227872581 . G . PASS END=227872581 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,933:0,67,255:26,0 chr2 227872582 . C . PASS END=227872582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 227872583 . A . PASS END=227872583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 227872584 . T . PASS END=227872729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:32:0,81,1143:0,81,255:40,0 chr2 227872730 . T . PASS END=227872732 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1186:0,63,255:32,0 chr2 227872733 . C . PASS END=227872750 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:31,0 chr2 227872751 . C . PASS END=227872751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:27,0 chr2 227872752 . G . PASS END=227872758 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:31:0,81,1215:0,93,255:29,0 chr2 227872759 . A . PASS END=227872759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:26,0 chr2 227872760 . G . PASS END=227872761 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 227872762 . C . PASS END=227872767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:31:0,78,1170:0,93,255:26,0 chr2 227872768 . C . PASS END=227872769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 227872770 . G . PASS END=227872781 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:28:0,67,986:0,67,255:26,0 chr2 227872782 . T . PASS END=227872782 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:48:27:0,48,892:0,48,255:23,0 chr2 227872783 . G . PASS END=227872789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:25,0 chr2 227872790 . T . PASS END=227872790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:57:26:0,57,855:0,78,255:19,0 chr2 227872791 . G . PASS END=227872792 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:26:0,60,900:0,78,255:20,0 chr2 227872793 . A . PASS END=227872820 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:16:0,45,675:0,48,255:17,0 chr2 227872821 . C . PASS END=227872821 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,598:0,15,255:16,0 chr2 227872822 . T . PASS END=227872822 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 227872823 . G . PASS END=227872823 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,590:0,15,255:13,0 chr2 227872824 . G . PASS END=227872825 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:18:0,42,630:0,54,255:14,0 chr2 227872826 . C . PASS END=227872829 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:12:17:0,12,558:0,12,255:13,0 chr2 227872830 . G . PASS END=227872830 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:39:17:0,39,585:0,51,255:13,0 chr2 227872831 . G . PASS END=227872837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,604:0,15,255:13,0 chr2 227872838 . A . PASS END=227872839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:14,0 chr2 227872840 . A . PASS END=227872840 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,659:0,18,255:14,0 chr2 227872841 . C . PASS END=227872841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,751:0,27,255:17,0 chr2 227872842 . C . PASS END=227872842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,592:0,18,255:17,0 chr2 227872843 . G . LowGQ END=227872843 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:0:19:0,0,535:12,0,255:16,0 chr2 227872844 . C . PASS END=227872844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:18:19:0,18,651:0,18,255:17,0 chr2 227872845 . A . LowGQ END=227872845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,2:18:0:18:0,0,557:1,0,255:16,0 chr2 227872846 . C . PASS END=227872846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 227872847 . A . PASS END=227872847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:15:18:0,15,620:0,15,255:17,0 chr2 227872848 . G . PASS END=227872854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:21:20:0,21,637:0,21,255:21,0 chr2 227872855 . A . PASS END=227872862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,747:0,30,255:23,0 chr2 227872863 . G . PASS END=227872863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,906:0,72,255:24,0 chr2 227872864 . C . PASS END=227872868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,829:0,33,255:23,0 chr2 227872869 . C . PASS END=227872871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 227872872 . C . PASS END=227872872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:21,0 chr2 227872873 . T . PASS END=227872873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:36:25:0,36,787:0,36,255:22,0 chr2 227872874 . C . PASS END=227872874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 227872875 . T . PASS END=227872877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:23,0 chr2 227872878 . A . PASS END=227872878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:26:0,72,1080:0,78,255:24,0 chr2 227872879 . G . PASS END=227872880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:24,0 chr2 227872881 . G . PASS END=227872883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:26:0,75,1000:0,78,255:26,0 chr2 227872884 . T . PASS END=227872885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,900:0,39,255:25,0 chr2 227872886 . G . PASS END=227872886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,986:0,78,255:26,0 chr2 227872887 . C . PASS END=227872887 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,803:0,39,255:25,0 chr2 227872888 . A . PASS END=227872888 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,868:0,29,255:26,0 chr2 227872889 . T . PASS END=227872889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,978:0,45,255:26,0 chr2 227872890 . C . PASS END=227872891 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1024:0,71,255:27,0 chr2 227872892 . T . PASS END=227872892 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,992:0,48,255:27,0 chr2 227872893 . G . PASS END=227872924 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1072:0,87,255:30,0 chr2 227872925 . A . PASS END=227872925 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1123:0,77,255:30,0 chr2 227872926 . T . PASS END=227872932 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:31:0,90,1149:0,93,255:31,0 chr2 227872933 . T . PASS END=227872933 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1100:0,77,255:29,0 chr2 227872934 . T . PASS END=227872975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:80:31:0,80,1113:0,80,255:34,0 chr2 227872976 . C . PASS END=227872976 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:63:34:0,63,1188:0,63,255:30,0 chr2 227872977 . A . PASS END=227872985 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:32:0,81,1215:0,96,255:30,0 chr2 227872986 . C . PASS END=227872986 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1096:0,79,255:27,0 chr2 227872987 . G . PASS END=227872987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:32:0,84,1260:0,96,255:28,0 chr2 227872988 . T . PASS END=227872998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:78:29:0,78,1170:0,79,255:26,0 chr2 227872999 . G . PASS END=227873000 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 227873001 . A . PASS END=227873020 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:62:26:0,62,945:0,62,255:26,0 chr2 227874994 . T . PASS END=227875119 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:84:32:0,84,1250:0,91,255:40,0 chr2 227875120 . C . PASS END=227875138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:63:26:0,63,945:0,78,255:26,0 chr2 227875139 . T . PASS END=227875159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:51:19:0,51,765:0,57,255:19,0 chr2 227875160 . C . PASS END=227875160 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,721:0,24,255:18,0 chr2 227875161 . C . PASS END=227875202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:18,0 chr2 227875203 . T . PASS END=227875209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:33:15:0,33,495:0,45,255:11,0 chr2 227875210 . A . PASS END=227875217 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:27:11:0,27,405:0,33,255:9,0 chr2 227876894 . T . PASS END=227876896 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,884:0,69,255:24,0 chr2 227876897 . C . PASS END=227876897 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 227876898 . T . PASS END=227876902 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:24:0,72,900:0,72,255:26,0 chr2 227876903 . C . PASS END=227876909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 227876910 . G . PASS END=227876912 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,992:0,65,255:26,0 chr2 227876913 . G . PASS END=227876968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:81:28:0,81,1205:0,83,255:38,0 chr2 227876969 . C . PASS END=227876969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1373:0,76,255:35,0 chr2 227876970 . A . PASS END=227877013 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:81:28:0,81,1215:0,84,255:37,0 chr2 227877028 . A . PASS END=227877028 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:72:28:0,72,1080:0,84,255:24,0 chr2 227880033 . T . PASS END=227880076 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:54,0:54:96:48:0,96,1800:0,96,255:40,2 chr2 227886753 . G . PASS END=227886753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 227886762 . A . PASS END=227886762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 227886764 . C . PASS END=227886766 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,870:0,72,255:25,0 chr2 227886767 . G . PASS END=227886789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:30,0 chr2 227886790 . G . PASS END=227886790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 227886791 . G . PASS END=227886864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:30:0,81,1133:0,90,255:36,0 chr2 227886865 . A . PASS END=227886880 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:78:26:0,78,954:0,78,255:26,0 chr2 227886881 . C . PASS END=227886881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,914:0,39,255:25,0 chr2 227886882 . C . PASS END=227886889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:26:0,69,1035:0,78,255:25,0 chr2 227890504 . A . PASS END=227890504 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 227890518 . C . PASS END=227890527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:63:0,120,1800:0,189,255:40,0 chr2 227892604 . G . PASS END=227892604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,676:0,54,255:18,0 chr2 227892609 . G . PASS END=227892609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 227892618 . C . PASS END=227892637 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,747:0,63,255:25,0 chr2 227892638 . T . PASS END=227892638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 227892639 . T . PASS END=227892649 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,862:0,75,255:26,0 chr2 227892650 . G . PASS END=227892660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1016:0,81,255:29,0 chr2 227892661 . A . PASS END=227892661 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,956:0,70,255:27,0 chr2 227892662 . C . PASS END=227892670 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:29:0,81,1215:0,87,255:29,0 chr2 227892671 . C . PASS END=227892671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1031:0,71,255:26,0 chr2 227892672 . C . PASS END=227892675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 227892676 . T . PASS END=227892685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,986:0,67,255:26,0 chr2 227892686 . A . PASS END=227892713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr2 227892714 . A . PASS END=227892725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:46:21:0,46,690:0,46,255:19,0 chr2 227892739 . A . PASS END=227892739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,63,255:16,0 chr2 227895159 . C . PASS END=227895185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:40:19:0,40,601:0,40,255:19,0 chr2 227895186 . C . PASS END=227895186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 227895187 . T . PASS END=227895187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,706:0,46,255:20,0 chr2 227895188 . G . PASS END=227895202 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,785:0,63,255:23,0 chr2 227895203 . C . PASS END=227895203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,806:0,53,255:22,0 chr2 227895204 . C . PASS END=227895256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,803:0,69,255:24,0 chr2 227895257 . C . PASS END=227895266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:21:0,48,720:0,55,255:19,0 chr2 227895267 . C . PASS END=227895267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:24:21:0,24,684:0,24,255:15,0 chr2 227895268 . T . PASS END=227895281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:16:0,42,630:0,48,255:16,0 chr2 227895282 . C . PASS END=227895296 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:33:13:0,33,495:0,39,255:13,0 chr2 227895297 . C . PASS END=227895308 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 227895309 . G . PASS END=227895314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 227896661 . C . PASS END=227896673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:41:19:0,41,651:0,41,255:19,0 chr2 227896674 . A . PASS END=227896674 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,1:20:21:20:0,21,690:0,21,255:18,0 chr2 227896675 . G . PASS END=227896675 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 227896676 . G . PASS END=227896704 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,823:0,63,255:24,0 chr2 227896705 . C . PASS END=227896705 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:23,0 chr2 227896706 . C . PASS END=227896706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227896707 . C . PASS END=227896708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:23,0 chr2 227896709 . G . PASS END=227896718 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:26:0,65,929:0,65,255:26,0 chr2 227896719 . G . PASS END=227896719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 227896720 . T . PASS END=227896730 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:68:28:0,68,992:0,68,255:26,0 chr2 227896731 . T . PASS END=227896731 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:29:28:0,29,892:0,29,255:24,0 chr2 227896732 . C . PASS END=227896742 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,876:0,61,255:25,0 chr2 227896743 . A . PASS END=227896743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:21,0 chr2 227896744 . C . PASS END=227896751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:22,0 chr2 227896752 . A . PASS END=227896755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:22:0,53,790:0,53,255:19,0 chr2 227896756 . G . PASS END=227896757 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:23:0,60,900:0,69,255:21,0 chr2 227896758 . T . PASS END=227896759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:53:23:0,53,798:0,53,255:19,0 chr2 227896760 . G . PASS END=227896768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:66:26:0,66,990:0,78,255:25,0 chr2 227896769 . T . PASS END=227896769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,882:0,59,255:23,0 chr2 227896770 . C . PASS END=227896771 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:72:25:0,72,1080:0,75,255:24,0 chr2 227896851 . T . PASS END=227896851 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 227896864 . C . PASS END=227896954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:84:34:0,84,1283:0,84,255:39,0 chr2 227896955 . T . PASS END=227896955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:77:36:0,77,1280:0,77,255:33,0 chr2 227896956 . A . PASS END=227896971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,1:34:86:34:0,86,1210:0,86,255:34,0 chr2 227896972 . G . PASS END=227896987 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:60:23:0,60,900:0,69,255:23,0 chr2 227896988 . C . PASS END=227896989 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 227896990 . A . PASS END=227896992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:39:22:0,39,585:0,66,255:13,0 chr2 227898112 . G . PASS END=227898112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:69:23:0,69,868:0,69,255:23,0 chr2 227898117 . G . PASS END=227898117 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:25,0 chr2 227898123 . T . PASS END=227898123 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:72:27:0,72,1080:0,81,255:24,0 chr2 227898126 . C . PASS END=227898133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:26:0,69,1000:0,78,255:26,0 chr2 227898134 . C . PASS END=227898165 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:82:31:0,82,1127:0,82,255:33,0 chr2 227898166 . C . PASS END=227898166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1108:0,77,255:29,0 chr2 227898167 . A . PASS END=227898191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:84:31:0,84,1158:0,93,255:32,0 chr2 227898192 . A . PASS END=227898192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 227898193 . G . PASS END=227898194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 227898195 . G . PASS END=227898195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2 227898196 . A . PASS END=227898197 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:27,0 chr2 227898205 . A . PASS END=227898205 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,942:0,73,255:26,0 chr2 227906864 . C . PASS END=227906914 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,808:0,62,255:26,0 chr2 227906915 . G . PASS END=227906929 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1055:0,84,255:29,0 chr2 227906930 . T . PASS END=227906930 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,1000:0,70,255:28,0 chr2 227906931 . T . PASS END=227906936 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1039:0,84,255:29,0 chr2 227906937 . T . PASS END=227906937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,1006:0,54,255:27,0 chr2 227906938 . G . PASS END=227906941 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 227906942 . G . PASS END=227906942 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:49:29:0,49,1023:0,49,255:28,0 chr2 227906943 . T . PASS END=227906943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:29:0,84,1260:0,87,255:28,0 chr2 227906944 . C . PASS END=227906944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1029:0,71,255:27,0 chr2 227906945 . C . PASS END=227906947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:29:0,81,1215:0,87,255:28,0 chr2 227906948 . T . PASS END=227906961 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:60:24:0,60,900:0,68,255:23,0 chr2 227906962 . C . PASS END=227906962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:19,0 chr2 227906963 . C . PASS END=227906963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:20,0 chr2 227906964 . G . PASS END=227906971 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,765:0,50,255:19,0 chr2 227907792 . C . PASS END=227907812 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:16:0,45,675:0,48,255:19,0 chr2 227907813 . G . PASS END=227907839 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:20:0,60,723:0,60,255:26,0 chr2 227907840 . G . PASS END=227907841 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,986:0,81,255:27,0 chr2 227907842 . T . PASS END=227907842 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:64:27:0,64,939:0,64,255:26,0 chr2 227907843 . G . PASS END=227907844 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,964:0,81,255:27,0 chr2 227907845 . T . PASS END=227907845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,992:0,65,255:26,0 chr2 227907846 . C . PASS END=227907871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,934:0,81,255:28,0 chr2 227907872 . G . PASS END=227907874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 227907875 . C . PASS END=227907875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 227907876 . T . PASS END=227907885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:60:27:0,60,900:0,81,255:26,0 chr2 227907886 . A . PASS END=227907886 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,961:0,50,255:19,0 chr2 227907887 . T . PASS END=227907889 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:22:0,60,900:0,61,255:20,0 chr2 227907890 . T . PASS END=227907890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:19,0 chr2 227907891 . C . PASS END=227907895 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 227907896 . A . PASS END=227907900 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:43:20:0,43,668:0,43,255:18,0 chr2 227912191 . C . PASS END=227912191 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 227912192 . T . PASS END=227912192 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:26,0 chr2 227912193 . G . PASS END=227912265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:81:28:0,81,1009:0,84,255:34,0 chr2 227914784 . C . PASS END=227914847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,0:64:99:58:0,120,1800:0,150,255:40,0 chr2 227914849 . T . PASS END=227914849 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,0:57:99:57:0,120,1800:0,171,255:40,0 chr2 227915679 . C . PASS END=227915679 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,668:0,54,255:18,0 chr2 227915693 . C . PASS END=227915720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:22:0,66,770:0,66,255:25,0 chr2 227915721 . A . PASS END=227915721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,809:0,58,255:24,0 chr2 227915722 . T . PASS END=227915724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 227915725 . A . PASS END=227915725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,876:0,59,255:24,0 chr2 227915726 . C . PASS END=227915727 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,917:0,75,255:25,0 chr2 227915728 . C . PASS END=227915728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1086:0,84,255:28,0 chr2 227915729 . T . PASS END=227915729 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1047:0,74,255:29,0 chr2 227915730 . C . PASS END=227915748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:90:30:0,90,1072:0,90,255:36,0 chr2 227915749 . G . PASS END=227915749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:70:36:0,70,1318:0,70,255:35,0 chr2 227915750 . A . PASS END=227915875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:38:0,103,1336:0,103,255:40,0 chr2 227915884 . T . PASS END=227915884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1179:0,91,255:31,0 chr2 227917020 . C . PASS END=227917025 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1086:0,87,255:29,0 chr2 227917026 . T . PASS END=227917026 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:70:29:0,70,986:0,70,255:28,0 chr2 227917027 . C . PASS END=227917040 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:29:0,84,1086:0,85,255:33,0 chr2 227917041 . T . PASS END=227917041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1192:0,69,255:32,0 chr2 227917042 . C . PASS END=227917048 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:85:34:0,85,1156:0,85,255:36,0 chr2 227917049 . A . PASS END=227917049 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:69:36:0,69,1296:0,69,255:35,0 chr2 227917050 . G . PASS END=227917090 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:36:0,104,1349:0,104,255:39,0 chr2 227917091 . A . PASS END=227917091 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,1:39:78:39:0,78,1304:0,78,255:36,0 chr2 227917092 . G . PASS END=227917116 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,89,255:36,0 chr2 227917117 . G . PASS END=227917128 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:27:0,66,990:0,81,255:23,0 chr2 227919297 . G . PASS END=227919297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,821:0,66,255:22,0 chr2 227919310 . C . PASS END=227919318 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:75:25:0,75,902:0,75,255:26,0 chr2 227919319 . C . PASS END=227919319 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1002:0,81,255:27,0 chr2 227919320 . T . PASS END=227919320 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,2:27:26:27:0,26,868:0,26,255:25,0 chr2 227919321 . C . PASS END=227919321 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,1047:0,81,255:27,0 chr2 227919322 . T . PASS END=227919324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 227919325 . G . PASS END=227919326 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 227919327 . C . PASS END=227919327 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1022:0,68,255:26,0 chr2 227919328 . C . PASS END=227919341 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,906:0,84,255:29,0 chr2 227919342 . A . PASS END=227919342 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1039:0,71,255:27,0 chr2 227919343 . G . PASS END=227919344 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1305:0,90,255:29,0 chr2 227919345 . C . PASS END=227919345 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 227919346 . C . PASS END=227919350 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 227919351 . A . PASS END=227919351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:28,0 chr2 227919352 . T . PASS END=227919357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1094:0,90,255:30,0 chr2 227919358 . T . PASS END=227919358 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,920:0,73,255:28,0 chr2 227919359 . C . PASS END=227919361 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:30:0,81,1215:0,90,255:27,0 chr2 227919362 . T . PASS END=227919374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:65:27:0,65,947:0,65,255:25,0 chr2 227919375 . T . PASS END=227919375 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,734:0,58,255:23,0 chr2 227919376 . T . PASS END=227919378 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 227919379 . C . PASS END=227919379 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,851:0,42,255:21,0 chr2 227919380 . G . PASS END=227919381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 227919382 . C . PASS END=227919384 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:55:24:0,55,801:0,55,255:21,0 chr2 227919385 . G . PASS END=227919385 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,900:0,75,255:20,0 chr2 227919386 . A . PASS END=227919435 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,1:19:40:17:0,40,599:0,40,255:19,0 chr2 227919436 . C . PASS END=227919436 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,596:0,35,255:13,0 chr2 227919437 . A . PASS END=227919437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:20:17:0,20,478:0,20,255:13,0 chr2 227919438 . G . PASS END=227919439 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 227919440 . C . PASS END=227919440 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:9:16:0,9,543:0,9,255:11,0 chr2 227919441 . A . PASS END=227919443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:12,0 chr2 227919444 . C . PASS END=227919444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,459:0,28,255:9,0 chr2 227919445 . C . PASS END=227919447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:10,0 chr2 227919448 . G . PASS END=227919448 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:24:15:0,24,360:0,45,255:8,0 chr2 227919449 . G . PASS END=227919449 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,2:15:12:15:0,12,471:0,12,255:7,0 chr2 227919450 . G . PASS END=227919453 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:24:11:0,24,360:0,33,255:8,0 chr2 227919456 . G . PASS END=227919456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:18:10:0,18,270:0,30,255:6,0 chr2 227919458 . T . PASS END=227919458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:21:11:0,21,315:0,33,255:7,0 chr2 227920661 . C . PASS END=227920669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,496:0,39,255:13,0 chr2 227920670 . C . PASS END=227920672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 227920673 . G . PASS END=227920678 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:14:0,39,585:0,42,255:13,0 chr2 227920679 . C . PASS END=227920723 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:15:0,42,529:0,45,255:18,0 chr2 227920724 . C . PASS END=227920741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,753:0,60,255:21,0 chr2 227920742 . C . PASS END=227920743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:47:21:0,47,751:0,47,255:21,0 chr2 227920744 . G . PASS END=227920767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:63:22:0,63,823:0,66,255:25,0 chr2 227920768 . C . PASS END=227920768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,853:0,58,255:24,0 chr2 227920769 . C . PASS END=227920800 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:25:0,60,886:0,75,255:25,0 chr2 227920801 . T . PASS END=227920801 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,2:25:42:25:0,42,715:0,42,255:19,0 chr2 227920802 . C . PASS END=227920809 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:23:0,60,900:0,69,255:21,0 chr2 227920810 . T . PASS END=227920810 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:20,0 chr2 227920811 . G . PASS END=227920817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:21,0 chr2 227920818 . C . PASS END=227920819 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:57:22:0,57,855:0,66,255:19,0 chr2 227920820 . C . PASS END=227920827 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:20,0 chr2 227920828 . G . PASS END=227920832 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:45:21:0,45,675:0,63,255:16,0 chr2 227922153 . A . PASS END=227922153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:27:10:0,27,405:0,30,255:9,0 chr2 227922155 . C . PASS END=227922155 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,258:0,13,255:9,0 chr2 227922156 . T . PASS END=227922179 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:21:8:0,21,280:0,24,255:9,0 chr2 227922180 . T . PASS END=227922181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,388:0,30,255:10,0 chr2 227922182 . C T, 0.01 DRAGENSnpHardQUAL DP=10;MQ=250.00;MQRankSum=1.393;ReadPosRankSum=-1.393;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:9,1,0:0.100,0.000:10:6,0,0:3,1,0:26:9,0,50,36,322,357:9,0,255:9,0:1.0618e-02,2.6124e+01,7.9124e+01,6.1868e+01,3.8255e+02,3.8652e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,4,0,1:6,3,1,0 chr2 227922183 . C . PASS END=227922194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:10:0,30,357:0,30,255:12,0 chr2 227922195 . T . PASS END=227922195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr2 227922196 . A . PASS END=227922216 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:11:0,30,450:0,33,255:12,0 chr2 227922217 . C . PASS END=227922236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,396:0,33,255:13,0 chr2 227922237 . T . PASS END=227922240 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 227922241 . A . PASS END=227922241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,457:0,25,255:13,0 chr2 227922242 . C . PASS END=227922242 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 227922243 . A . PASS END=227922243 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:14,0 chr2 227922244 . C . PASS END=227922257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,537:0,45,255:15,0 chr2 227922258 . A . PASS END=227922269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:14:0,36,540:0,42,255:13,0 chr2 227922270 . G . PASS END=227922271 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,443:0,25,255:12,0 chr2 227922272 . C . PASS END=227922272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 227922273 . T . PASS END=227922273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,390:0,25,255:12,0 chr2 227922274 . T . PASS END=227922281 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:13:0,33,474:0,39,255:13,0 chr2 227922282 . T . PASS END=227922282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:22:13:0,22,410:0,22,255:10,0 chr2 227922283 . T . PASS END=227922284 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:13:0,30,450:0,39,255:11,0 chr2 227922285 . G . PASS END=227922303 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:9:0,27,319:0,27,255:9,0 chr2 227922304 . A . PASS END=227922304 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,1:9:10:9:0,10,271:0,10,255:8,0 chr2 227922305 . T . PASS END=227922316 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:24:9:0,24,360:0,27,255:8,0 chr2 227924115 . T . PASS END=227924115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 227924121 . C . PASS END=227924145 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,390:0,36,255:13,0 chr2 227924146 . A . PASS END=227924146 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,2:13:6:13:0,6,385:0,6,255:11,0 chr2 227924147 . C . PASS END=227924158 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,474:0,42,255:15,0 chr2 227924159 . T . PASS END=227924159 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:14:15:0,14,451:0,14,255:14,0 chr2 227924160 . T . PASS END=227924172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,484:0,42,255:15,0 chr2 227924173 . T . PASS END=227924173 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 227924174 . C . PASS END=227924184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,512:0,42,255:14,0 chr2 227924185 . C . PASS END=227924195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 227924196 . G . PASS END=227924196 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:11,0 chr2 227924197 . G . PASS END=227924203 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,421:0,39,255:13,0 chr2 227924204 . A . PASS END=227924204 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,449:0,23,255:12,0 chr2 227924205 . G . PASS END=227924209 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,474:0,39,255:13,0 chr2 227924210 . C . PASS END=227924213 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,490:0,42,255:14,0 chr2 227924214 . A . PASS END=227924227 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:14:0,33,495:0,42,255:13,0 chr2 227924228 . G . PASS END=227924228 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:6:15:0,6,474:0,6,255:11,0 chr2 227924229 . G . PASS END=227924232 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 227924233 . T . PASS END=227924233 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,496:0,28,255:12,0 chr2 227924234 . C . PASS END=227924234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:39:15:0,39,585:0,45,255:13,0 chr2 227924235 . C . PASS END=227924236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 227924237 . T . PASS END=227924237 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:13,0 chr2 227924238 . T . PASS END=227924241 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 227924242 . A . PASS END=227924247 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 227924248 . C . PASS END=227924248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:25:14:0,25,465:0,25,255:12,0 chr2 227924249 . A . PASS END=227924249 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 227924250 . C . PASS END=227924250 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:15:0,42,630:0,45,255:14,0 chr2 227924251 . T . PASS END=227924314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,335:0,30,255:13,0 chr2 227924315 . G . PASS END=227924322 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:24:10:0,24,360:0,30,255:9,0 chr2 227924323 . C . PASS END=227924324 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,1:10:13:10:0,13,302:0,13,255:7,0 chr2 227924325 . T . PASS END=227924336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,266:0,24,255:8,0 chr2 227924337 . A . PASS END=227924338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,1:8:7:8:0,7,210:0,7,210:7,0 chr2 227924339 . C . PASS END=227924339 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 227924850 . A . PASS END=227924850 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,2:28:51:28:0,51,898:0,51,255:25,0 chr2 227924852 . C . PASS END=227924852 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,3:29:37:29:0,37,914:0,37,255:25,0 chr2 227924853 . A . PASS END=227924854 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,3:30:17:29:0,17,799:0,17,255:27,0 chr2 227924855 . G . PASS END=227924855 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:73:30:0,73,1017:0,73,255:27,0 chr2 227924856 . T . PASS END=227924856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,4:31:5:31:0,5,943:0,5,255:27,0 chr2 227924857 . G . PASS END=227924858 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:60:31:0,60,1008:0,60,255:29,0 chr2 227924859 . A . LowGQ END=227924859 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,5:32:0:32:0,0,831:9,0,255:27,0 chr2 227924860 . C . PASS END=227924860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:24:32:0,24,1000:0,24,255:29,0 chr2 227924861 . C . PASS END=227924861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:30:32:0,30,981:0,30,255:26,0 chr2 227924862 . T . PASS END=227924862 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,963:0,10,255:29,0 chr2 227924863 . G . PASS END=227924863 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1066:0,57,255:29,0 chr2 227924864 . G . PASS END=227924864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1103:0,79,255:29,0 chr2 227924865 . T . PASS END=227924865 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,903:0,10,255:29,0 chr2 227924866 . A T, 0.01 DRAGENSnpHardQUAL DP=28;MQ=246.19;MQRankSum=0.720;ReadPosRankSum=0.180;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:23,5,0:0.179,0.000:28:12,2,0:11,3,0:28:7,0,50,92,750,849:9,0,255:27,0:6.4654e-03,2.8275e+01,8.1275e+01,1.2002e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:7,16,5,0:18,5,2,3 chr2 227924867 . T . PASS END=227924867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:57:32:0,57,1086:0,57,255:29,0 chr2 227924868 . T . PASS END=227924869 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:32:0,80,1125:0,80,255:29,0 chr2 227924870 . C . PASS END=227924870 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:18:32:0,18,972:0,18,255:28,0 chr2 227924871 . C . PASS END=227924871 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:2:32:0,2,969:0,2,255:27,0 chr2 227924872 . G . PASS END=227924872 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1054:0,63,255:28,0 chr2 227924873 . C . LowGQ END=227924873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,4:32:0:32:0,0,892:15,0,255:27,0 chr2 227924874 . T . PASS END=227924874 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,3:32:10:32:0,10,939:0,10,255:28,0 chr2 227924875 . G . PASS END=227924876 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:41:35:0,41,1064:0,41,255:31,0 chr2 227924877 . T . PASS END=227924877 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:88:35:0,88,1219:0,88,255:30,0 chr2 227924878 . C . LowGQ END=227924878 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,4:35:0:35:0,0,1002:12,0,255:30,0 chr2 227924879 . C . PASS END=227924879 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,3:35:55:35:0,55,1147:0,55,255:30,0 chr2 227924880 . T . PASS END=227924881 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:66:35:0,66,1241:0,66,255:29,0 chr2 227924882 . G . PASS END=227924882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 227924883 . T . PASS END=227924883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:61:36:0,61,1196:0,61,255:30,0 chr2 227924884 . G . PASS END=227924884 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:90:36:0,90,1350:0,108,255:30,0 chr2 227924885 . T . PASS END=227924885 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,3:37:62:37:0,62,1246:0,62,255:31,0 chr2 227924886 . G . PASS END=227924903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:92:36:0,92,1264:0,92,255:36,0 chr2 227924904 . C . PASS END=227924904 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1365:0,76,255:31,0 chr2 227924905 . C . PASS END=227924909 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:96:38:0,96,1440:0,114,255:33,0 chr2 227924910 . T . PASS END=227924910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:76:38:0,76,1372:0,76,255:33,0 chr2 227924911 . G . PASS END=227924918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:93:34:0,93,1372:0,98,255:34,0 chr2 227924919 . C . PASS END=227924934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:60:25:0,60,900:0,75,255:26,0 chr2 227924935 . T . PASS END=227924935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,906:0,59,255:20,0 chr2 227924936 . G . PASS END=227924939 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:24:0,60,900:0,72,255:20,0 chr2 227924940 . A . PASS END=227924940 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:20,0 chr2 227924941 . C . PASS END=227924953 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,762:0,63,255:21,0 chr2 227924954 . T . PASS END=227924959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:20:0,57,855:0,60,255:19,0 chr2 227927246 . C . PASS END=227927314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,0:47:83:33:0,83,1194:0,83,255:40,0 chr2 227927316 . T . PASS END=227927317 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:99:48:0,120,1800:0,144,255:40,0 chr2 227942606 . T . PASS END=227942606 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:33:11:0,33,426:0,33,255:11,0 chr2 227942610 . C . PASS END=227942611 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:33:11:0,33,426:0,33,255:13,0 chr2 227942612 . T . PASS END=227942640 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,520:0,42,255:19,0 chr2 227942641 . C . PASS END=227942706 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:20:0,60,759:0,60,255:26,0 chr2 227942707 . T . PASS END=227942707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,884:0,39,255:21,0 chr2 227942708 . G . PASS END=227942743 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:25:0,60,900:0,62,255:26,0 chr2 227942744 . A . PASS END=227942744 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,930:0,39,255:25,0 chr2 227942745 . G . PASS END=227942768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,900:0,72,255:25,0 chr2 227942769 . C . PASS END=227942769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,845:0,33,255:20,0 chr2 227942770 . T . PASS END=227942770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:63:24:0,63,945:0,72,255:21,0 chr2 227942771 . G . PASS END=227942793 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 227945159 . T . PASS END=227945266 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:43:0,113,1558:0,113,255:40,0 chr2 227946830 . C . PASS END=227946903 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:67,0:67:99:53:0,120,1800:0,129,255:40,0 chr2 227953368 . C . PASS END=227953371 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:24:8:0,24,280:0,24,255:8,0 chr2 227953372 . T . PASS END=227953374 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:13,0 chr2 227953375 . C . PASS END=227953417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,490:0,42,255:19,0 chr2 227953418 . G . PASS END=227953419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,745:0,60,255:20,0 chr2 227953420 . T . PASS END=227953437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:19:0,54,692:0,57,255:19,0 chr2 227953438 . C . PASS END=227953452 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:20:0,60,723:0,60,255:20,0 chr2 227953453 . A . PASS END=227953510 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,630:0,41,255:19,0 chr2 227953511 . C . PASS END=227953512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:30:15:0,30,450:0,45,255:11,0 chr2 227953513 . G . PASS END=227953527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:21:8:0,21,315:0,24,255:8,0 chr2 227953528 . A . PASS END=227953532 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,249:6,0 chr2 227953538 . C . PASS END=227953538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:7,0:7:15:7:0,15,225:0,21,255:5,0 chr2 227954582 . G . PASS END=227954582 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:99:44:0,120,1800:0,132,255:40,0 chr2 227954584 . C . PASS END=227954584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,1:45:96:45:0,96,1623:0,96,255:40,2 chr2 227954585 . T . PASS END=227954585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,2:46:69:46:0,69,1523:0,69,255:40,2 chr2 227954586 . T . PASS END=227954658 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:48,0:48:81:42:0,81,1215:0,99,255:40,0 chr2 227954659 . C . PASS END=227954671 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:60:25:0,60,900:0,75,255:24,0 chr2 227954672 . C . PASS END=227954673 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:57:23:0,57,855:0,69,255:19,0 chr2 227958826 . T . PASS END=227958826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:5,0:5:15:5:0,15,186:0,15,186:5,0 chr2 227958837 . T . PASS END=227958837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,349:0,27,255:9,0 chr2 227958840 . C . PASS END=227958845 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,311:0,27,255:9,0 chr2 227958846 . G . PASS END=227958846 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,0:10:30:10:0,30,365:0,30,255:10,0 chr2 227958847 . A . PASS END=227958847 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 227958848 . T . PASS END=227958856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 227958857 . G . PASS END=227958967 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:15:0,41,559:0,41,255:19,0 chr2 227958968 . A . PASS END=227958968 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,537:0,34,255:15,0 chr2 227958969 . C . PASS END=227958974 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:17,0 chr2 227958975 . A . PASS END=227958975 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,598:0,37,255:15,0 chr2 227958976 . A . PASS END=227958980 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:48:18:0,48,720:0,54,255:16,0 chr2 227958981 . T . PASS END=227958992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:30:17:0,30,450:0,34,255:13,0 chr2 227958993 . G . PASS END=227959005 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:20:10:0,20,315:0,20,255:9,0 chr2 227959014 . T . PASS END=227959014 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:8,0:8:21:8:0,21,315:0,24,255:7,0 chr2 227963403 . T . PASS END=227963403 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 227963410 . C . PASS END=227963472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:60:23:0,60,900:0,62,255:26,0 chr2 227963473 . T . PASS END=227963485 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:48:18:0,48,720:0,50,255:18,0 chr2 227963486 . G . PASS END=227963486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,604:0,37,255:14,0 chr2 227963487 . C . PASS END=227963489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:45:17:0,45,675:0,51,255:15,0 chr2 227963490 . G . PASS END=227963490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:34:17:0,34,566:0,34,255:14,0 chr2 227963491 . G . PASS END=227963493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:15,0 chr2 227963494 . A . PASS END=227963497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 227963498 . T . PASS END=227963499 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 227963500 . G . PASS END=227963500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:32:16:0,32,549:0,32,255:14,0 chr2 227963501 . G . PASS END=227963514 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,498:0,42,255:14,0 chr2 227963516 . T . PASS END=227963516 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 227964336 . C . PASS END=227964336 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1202:0,96,255:32,0 chr2 227964337 . T . PASS END=227964338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,2:32:63:32:0,63,1034:0,63,255:31,0 chr2 227964339 . T . PASS END=227964351 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:32:0,83,1158:0,83,255:36,0 chr2 227964352 . T . PASS END=227964352 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,2:37:78:37:0,78,1308:0,78,255:34,0 chr2 227964353 . G . PASS END=227964407 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:87:35:0,87,1272:0,92,255:40,0 chr2 227966218 . A . PASS END=227966218 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,2:58:99:58:0,120,1800:0,127,255:40,0 chr2 227966220 . C . PASS END=227966255 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,1:67:99:58:0,120,1800:0,132,255:40,0 chr2 227966256 . A . PASS END=227966273 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,2:61:84:58:0,84,1260:0,150,255:40,0 chr2 227966580 . C . PASS END=227966625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:90,1:91:99:88:0,120,1800:0,251,255:40,0 chr2 227966638 . C . PASS END=227966638 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:83,0:83:99:83:0,120,1800:0,250,255:40,0 chr2 227967475 . T . PASS END=227967475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,1:42:99:42:0,110,1535:0,110,255:40,0 chr2 227967505 . C . PASS END=227967554 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:70,0:70:99:67:0,120,1800:0,163,255:40,0 chr2 227967555 . C . PASS END=227967565 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:61:0,120,1800:0,150,255:40,0 chr2 227967860 . C . PASS END=227967882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:57:0,119,1800:0,119,255:40,0 chr2 227967883 . G . PASS END=227967913 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,1:56:99:51:0,112,1800:0,112,255:40,0 chr2 227967919 . A . PASS END=227967919 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 227968676 . T . PASS END=227968676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:59:25:0,59,914:0,59,255:24,0 chr2 227968688 . C . PASS END=227968696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:65:24:0,65,953:0,65,255:26,0 chr2 227968697 . T . PASS END=227968699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,932:0,81,255:27,0 chr2 227968700 . A . PASS END=227968700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,992:0,68,255:27,0 chr2 227968701 . T . PASS END=227968707 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,950:0,84,255:28,0 chr2 227968708 . A . PASS END=227968708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:67:28:0,67,955:0,67,255:27,0 chr2 227968709 . A . PASS END=227968720 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:29:0,80,1094:0,80,255:31,0 chr2 227968721 . C . PASS END=227968721 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:66:32:0,66,1163:0,66,255:31,0 chr2 227968722 . T . PASS END=227968728 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:31:0,80,1147:0,80,255:30,0 chr2 227968729 . A . PASS END=227968741 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:29:0,66,990:0,87,255:25,0 chr2 227968742 . A . PASS END=227968768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:48:23:0,48,720:0,69,255:19,0 chr2 227968771 . TA T,TAA, 0.04 DRAGENIndelHardQUAL DP=22;MQ=250.00;MQRankSum=3.262;ReadPosRankSum=-0.867;FractionInformativeReads=0.955;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/0:16,1,4,0:0.048,0.190,0.000:21:9,1,3,0:7,0,1,0:20:0,47,97,5,166,55,43,216,145,183:120,0,255:16,8:4.3554e-02,6.1945e+01,1.1494e+02,2.0010e+01,1.9564e+02,7.3010e+01,7.7535e+01,2.6561e+02,1.9465e+02,2.2040e+02:0.00,15.00,18.00,15.00,30.00,18.00,34.77,49.77,49.77,37.77:8,8,2,3:13,3,3,2 chr2 227968778 . A . PASS END=227968778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,762:0,63,255:21,0 chr2 227973297 . C . PASS END=227973338 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:87:33:0,87,1258:0,87,255:39,0 chr2 227973549 . C . PASS END=227973584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:42:0,117,1755:0,124,255:40,0 chr2 227973586 . T . PASS END=227973586 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:99:42:0,117,1755:0,126,255:39,0 chr2 227973939 . C . PASS END=227973947 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1102:0,87,255:31,0 chr2 227973948 . C . PASS END=227973948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1139:0,77,255:30,0 chr2 227973949 . T . PASS END=227973963 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:83:31:0,83,1036:0,83,255:32,0 chr2 227973964 . T . PASS END=227973964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:68:33:0,68,1149:0,68,255:31,0 chr2 227973965 . C . PASS END=227973965 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:83:33:0,83,1224:0,83,255:31,0 chr2 227973966 . C . PASS END=227973966 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:75:35:0,75,1279:0,75,255:33,0 chr2 227973967 . T . PASS END=227973981 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:86:34:0,86,1233:0,86,255:34,0 chr2 227973982 . T . PASS END=227973982 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1163:0,69,255:28,0 chr2 227973983 . C . PASS END=227973993 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:80:31:0,80,1155:0,80,255:30,0 chr2 227973994 . C . PASS END=227973994 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1116:0,77,255:26,0 chr2 227973995 . C . PASS END=227973995 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:27,0 chr2 227973996 . A . PASS END=227973998 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:75:31:0,75,1102:0,77,255:26,0 chr2 227973999 . A . PASS END=227973999 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,2:31:46:31:0,46,1031:0,46,255:23,0 chr2 227974000 . T . PASS END=227974001 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:68:28:0,68,1022:0,68,255:24,0 chr2 227974002 . C . PASS END=227974002 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:54:28:0,54,1000:0,54,255:24,0 chr2 227976393 . C . PASS END=227976429 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:91:39:0,91,1530:0,91,255:40,0 chr2 227979344 . C . PASS END=227979412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:91,1:92:99:79:0,120,1800:0,221,255:40,0 chr2 227983360 . C . PASS END=227983362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 227983363 . G . PASS END=227983408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:15:0,42,515:0,45,255:19,0 chr2 227983409 . G . PASS END=227983411 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,731:0,63,255:21,0 chr2 227983412 . A . PASS END=227983412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:19,0 chr2 227983413 . C . PASS END=227983414 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,900:0,63,255:21,0 chr2 227983415 . T . PASS END=227983415 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,685:0,49,255:20,0 chr2 227983416 . C . PASS END=227983419 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,945:0,66,255:21,0 chr2 227983420 . A . PASS END=227983445 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:17:0,42,630:0,50,255:19,0 chr2 227983446 . T . PASS END=227983459 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:13:0,33,495:0,39,255:13,0 chr2 227983460 . A . PASS END=227983460 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:23:13:0,23,441:0,23,255:10,0 chr2 227983461 . G . LowGQ END=227983461 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,1:13:0:13:0,0,396:0,0,255:10,0 chr2 227983462 . G . PASS END=227983464 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 227983465 . G . PASS END=227983465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:9,0 chr2 227983466 . C . PASS END=227983472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 227983473 . T . PASS END=227983476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 227983477 . C . PASS END=227983477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 227984604 . T . PASS END=227984604 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:43:0,120,1800:0,129,255:40,0 chr2 227984609 . A . PASS END=227984609 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:56:0,120,1800:0,169,255:40,0 chr2 227984611 . A . PASS END=227984656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,1:65:99:58:0,120,1800:0,154,255:40,0 chr2 227985730 . C . PASS END=227985737 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:45:17:0,45,675:0,51,255:19,0 chr2 227985738 . C . PASS END=227985738 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,767:0,60,255:20,0 chr2 227985739 . T . PASS END=227985739 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:46:21:0,46,676:0,46,255:20,0 chr2 227985740 . T . PASS END=227985748 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 227985749 . G . PASS END=227985749 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,751:0,47,255:20,0 chr2 227985750 . C . PASS END=227985751 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,747:0,63,255:21,0 chr2 227985752 . G . PASS END=227985753 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,743:0,47,255:20,0 chr2 227985754 . T . PASS END=227985755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,770:0,63,255:21,0 chr2 227985756 . C . PASS END=227985756 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,1:21:47:21:0,47,729:0,47,255:20,0 chr2 227985757 . A . PASS END=227985759 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,739:0,63,255:21,0 chr2 227985760 . A . PASS END=227985762 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:57:21:0,57,855:0,63,255:19,0 chr2 227985763 . G . PASS END=227985764 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 227985765 . C . PASS END=227985765 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,790:0,50,255:20,0 chr2 227985766 . G . PASS END=227985767 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 227985768 . G . PASS END=227985768 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:27:22:0,27,729:0,27,255:19,0 chr2 227985769 . G . PASS END=227985769 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:22:0,60,900:0,66,255:20,0 chr2 227985770 . T . PASS END=227985770 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:49:22:0,49,670:0,49,255:19,0 chr2 227985771 . C . PASS END=227985777 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,807:0,66,255:23,0 chr2 227985778 . C . PASS END=227985778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:21,0 chr2 227985779 . A . PASS END=227985779 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,990:0,69,255:22,0 chr2 227985780 . T . PASS END=227985780 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,784:0,30,255:21,0 chr2 227985781 . T . PASS END=227985785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:66:23:0,66,990:0,69,255:23,0 chr2 227985786 . T . PASS END=227985786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,748:0,55,255:22,0 chr2 227985787 . C . PASS END=227985787 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:24:0,69,1035:0,72,255:23,0 chr2 227985788 . T . PASS END=227985788 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,815:0,55,255:23,0 chr2 227985789 . C . PASS END=227985789 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 227985790 . T . PASS END=227985790 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:23,0 chr2 227985791 . C . PASS END=227985815 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:60:22:0,60,892:0,66,255:24,0 chr2 227985816 . C . PASS END=227985838 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:41:19:0,41,630:0,41,255:18,0 chr2 227985839 . T . PASS END=227985860 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:33:12:0,33,495:0,36,255:13,0 chr2 227985861 . G . PASS END=227985861 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,394:0,20,255:10,0 chr2 227985862 . A . PASS END=227985864 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:11:0,33,404:0,33,255:11,0 chr2 227985873 . G . PASS END=227985873 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 228004875 . A . PASS END=228004875 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:99:59:0,120,1800:0,178,255:40,0 chr2 228004877 . C . PASS END=228004954 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:66,0:66:99:59:0,120,1800:0,153,255:40,0 chr2 228009231 . C . PASS END=228009275 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:62,0:62:99:54:0,120,1800:0,149,255:40,0 chr2 228012128 . C . PASS END=228012199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:68,0:68:99:49:0,120,1800:0,134,255:40,0 chr2 228028713 . G . PASS END=228028713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,482:0,39,255:13,0 chr2 228028715 . C . PASS END=228028715 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 228028755 . G . PASS END=228028755 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,512:0,42,255:14,0 chr2 228028798 . C . PASS END=228028798 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:30:12:0,30,450:0,36,255:10,0 chr2 228028922 . G . PASS END=228028922 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:48:16:0,48,620:0,48,255:16,0 chr2 228028962 . C . PASS END=228028962 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,775:0,60,255:20,0 chr2 228029029 . C . PASS END=228029029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:39:16:0,39,585:0,48,255:13,0 chr2 228029148 . C . PASS END=228029148 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,504:0,39,255:13,0 chr2 228029176 . C . PASS END=228029176 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 228029262 . C . PASS END=228029262 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:36:13:0,36,540:0,39,255:12,0 chr2 228029297 . G . PASS END=228029297 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 228029309 . T . LowGQ END=228029309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:0:12:0,0,388:3,0,255:10,0 chr2 228029362 . G . PASS END=228029362 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:17:11:0,17,371:0,17,255:8,0 chr2 228029417 . G . PASS END=228029417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,449:0,36,255:12,0 chr2 228029427 . T . PASS END=228029427 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 228029430 . G . PASS END=228029430 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 228029433 . C . PASS END=228029433 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,465:0,36,255:12,0 chr2 228029443 . A . PASS END=228029443 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,574:0,45,255:15,0 chr2 228029444 . T . PASS END=228029444 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:29:15:0,29,526:0,29,255:14,0 chr2 228029445 . G . PASS END=228029455 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:45:15:0,45,529:0,45,255:15,0 chr2 228029456 . C . PASS END=228029458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:12,0 chr2 228029459 . C . PASS END=228029466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:42:17:0,42,630:0,51,255:14,0 chr2 228029467 . C . PASS END=228029467 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:38:18:0,38,643:0,38,255:14,0 chr2 228029468 . C . PASS END=228029471 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:42:14:0,42,488:0,42,255:15,0 chr2 228029472 . G . PASS END=228029473 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:15:0,36,540:0,45,255:13,0 chr2 228029474 . T . PASS END=228029475 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,1:15:28:15:0,28,504:0,28,255:11,0 chr2 228029476 . C . PASS END=228029486 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:36:12:0,36,443:0,36,255:12,0 chr2 228029487 . G . PASS END=228029487 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:19:12:0,19,357:0,19,255:11,0 chr2 228029488 . C . PASS END=228029490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:36:12:0,36,435:0,36,255:12,0 chr2 228029491 . C . PASS END=228029491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,410:0,20,255:11,0 chr2 228029492 . T . PASS END=228029495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:12,0:12:33:12:0,33,495:0,36,255:11,0 chr2 228029496 . G . PASS END=228029496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,1:12:20:12:0,20,402:0,20,255:10,0 chr2 228029497 . G . PASS END=228029525 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,382:0,33,255:11,0 chr2 228029526 . C . PASS END=228029526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:10,1:11:16:11:0,16,349:0,16,255:9,0 chr2 228029527 . A . PASS END=228029527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:30:11:0,30,450:0,33,255:10,0 chr2 228029528 . A . PASS END=228029529 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 228029536 . G . PASS END=228029536 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:11,0:11:27:11:0,27,405:0,33,255:9,0 chr2 228102684 . G . PASS END=228102685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:75,0:75:99:75:0,120,1800:0,209,255:40,0 chr2 228102686 . T . PASS END=228102722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:75:0,120,1800:0,209,255:40,0 chr2 228102723 . G C, 50.00 PASS DP=80;MQ=250.00;MQRankSum=7.693;ReadPosRankSum=5.634;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:40,40,0:0.500,0.000:80:17,15,0:23,25,0:48:85,0,50,1344,1402,2746:255,0,255:39,0:5.0000e+01,6.5233e-05,5.3000e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:13,27,15,25:22,18,26,14 chr2 228102724 . G . PASS END=228102740 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:80,0:80:99:77:0,120,1800:0,224,255:40,0 chr2 228104856 . C . PASS END=228104856 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:93:32:0,93,1395:0,96,255:31,0 chr2 228104859 . G . PASS END=228104867 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:80:32:0,80,1148:0,80,255:32,0 chr2 228104868 . G . PASS END=228104868 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:32,0 chr2 228104869 . G . PASS END=228104943 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:82:33:0,82,1224:0,82,255:40,0 chr2 228104944 . C . PASS END=228104948 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:63:37:0,63,945:0,111,255:25,0 chr2 228109036 . G . PASS END=228109081 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:99:51:0,120,1800:0,123,255:40,0 chr2 228109667 . G . PASS END=228109676 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:64,2:66:99:61:0,120,1800:0,165,255:40,0 chr2 228109677 . G . PASS END=228109711 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,1:66:99:62:0,120,1800:0,148,255:40,0 chr2 228110669 . G . PASS END=228110733 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:98:38:0,98,1372:0,98,255:40,0 chr2 228111386 . T . PASS END=228111386 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,800:0,55,255:23,0 chr2 228111399 . A . PASS END=228111434 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:84:28:0,84,1031:0,84,255:30,0 chr2 228111435 . T C, 136.83 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,16,0:0,14,0:87:175,90,0,1134,90,1134:255,90,0:0,0:1.3683e+02,8.6831e+01,0.0000e+00,4.5000e+02,1.2160e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,16,14:0,0,10,20 chr2 228111436 . G . PASS END=228111437 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1086:0,90,255:30,0 chr2 228111438 . G . PASS END=228111438 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1100:0,74,255:29,0 chr2 228111439 . C . PASS END=228111446 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1124:0,87,255:30,0 chr2 228111447 . G . PASS END=228111447 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1086:0,74,255:28,0 chr2 228111448 . G . PASS END=228111454 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:29:0,87,1033:0,87,255:29,0 chr2 228112274 . G . PASS END=228112301 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:82,0:82:99:79:0,120,1800:0,193,255:40,0 chr2 228112309 . T . PASS END=228112309 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:74,0:74:99:74:0,120,1800:0,223,255:40,0 chr2 228113159 . G . PASS END=228113163 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,972:0,81,255:27,0 chr2 228113164 . T . PASS END=228113166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:27:0,78,1170:0,81,255:26,0 chr2 228113167 . T . PASS END=228113174 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:29,0 chr2 228113175 . A G, 136.83 PASS DP=30;MQ=250.00;FractionInformativeReads=1.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 1/1:0,30,0:1.000,0.000:30:0,18,0:0,12,0:87:175,90,0,1131,90,1131:255,90,0:0,0:1.3683e+02,8.6829e+01,0.0000e+00,4.5000e+02,1.2160e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:0,0,14,16:0,0,14,16 chr2 228113176 . A . PASS END=228113177 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1078:0,87,255:29,0 chr2 228113178 . A . PASS END=228113178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,2:29:54:29:0,54,990:0,54,255:27,0 chr2 228113179 . A . PASS END=228113212 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:29:0,83,1116:0,83,255:36,0 chr2 228113213 . T . PASS END=228113234 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:34:0,84,1260:0,102,255:36,0 chr2 228113235 . A . PASS END=228113236 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 228115855 . G . PASS END=228115882 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:88:34:0,88,1098:0,88,255:39,0 chr2 228115883 . G . PASS END=228115883 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,3:40:71:40:0,71,1377:0,71,255:31,0 chr2 228115884 . G . PASS END=228115918 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:90:36:0,90,1183:0,94,255:36,0 chr2 228116041 . G . PASS END=228116041 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:60:0,120,1800:0,180,255:40,0 chr2 228116052 . G . PASS END=228116087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:65,0:65:99:64:0,120,1800:0,162,255:40,0 chr2 228116089 . T . PASS END=228116089 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:63,1:64:99:64:0,120,1800:0,176,255:40,0 chr2 228118012 . G . PASS END=228118053 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:72,0:72:99:67:0,120,1800:0,170,255:40,0 chr2 228118269 . G . PASS END=228118269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:99:45:0,120,1800:0,135,255:40,0 chr2 228118277 . G . PASS END=228118354 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:40:0,102,1499:0,102,255:40,0 chr2 228118356 . T . PASS END=228118356 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:41:0,111,1665:0,123,255:37,0 chr2 228118826 . A . PASS END=228118826 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:58,0:58:99:58:0,120,1800:0,174,255:40,0 chr2 228118828 . G . PASS END=228118890 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:59,0:59:90:41:0,90,1440:0,90,255:40,0 chr2 228118899 . T . PASS END=228118899 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:99:35:0,105,1264:0,105,255:35,0 chr2 228119357 . C . PASS END=228119357 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,1:36:91:36:0,91,1203:0,91,255:35,0 chr2 228119370 . A . PASS END=228119370 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:94:47:0,94,1615:0,94,255:40,0 chr2 228119372 . G . PASS END=228119431 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:53,0:53:99:49:0,114,1647:0,114,255:40,0 chr2 228120742 . G . PASS END=228120786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:76,0:76:99:73:0,120,1800:0,192,255:40,0 chr2 228121059 . G . PASS END=228121063 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:51:0,120,1800:0,153,255:40,0 chr2 228121064 . C . PASS END=228121100 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:60,0:60:99:56:0,120,1800:0,152,255:40,0 chr2 228121101 . G T, 50.00 PASS DP=56;MQ=248.62;MQRankSum=6.347;ReadPosRankSum=3.026;FractionInformativeReads=0.982;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:26,29,0:0.527,0.000:55:8,12,0:18,17,0:48:85,0,50,1036,930,1966:255,0,255:23,0:5.0000e+01,6.6527e-05,5.2743e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:10,16,11,18:12,14,14,15 chr2 228121102 . A . PASS END=228121112 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:99:49:0,111,1665:0,130,255:40,0 chr2 228122319 . G . PASS END=228122360 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:57,1:58:99:53:0,120,1800:0,126,255:40,0 chr2 228124509 . A . PASS END=228124537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,909:0,75,255:26,0 chr2 228124538 . G . PASS END=228124540 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1003:0,81,255:28,0 chr2 228124541 . A . PASS END=228124541 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:78:26:0,78,976:0,78,255:26,0 chr2 228124542 . G . PASS END=228124548 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1001:0,84,255:28,0 chr2 228124549 . G . PASS END=228124563 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:25:0,63,945:0,71,255:25,0 chr2 228124564 . C . PASS END=228124593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:41:17:0,41,630:0,41,255:19,0 chr2 228125798 . G . PASS END=228125833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:55,0:55:99:48:0,120,1800:0,128,255:40,0 chr2 228125837 . T . PASS END=228125837 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:50,0:50:99:50:0,120,1800:0,150,255:40,0 chr2 228128496 . G . PASS END=228128498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:9,0:9:27:9:0,27,288:0,27,255:9,0 chr2 228128499 . C . PASS END=228128500 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:30:10:0,30,380:0,30,255:13,0 chr2 228128501 . T . PASS END=228128501 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:42:14:0,42,520:0,42,255:14,0 chr2 228128502 . C . PASS END=228128502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,1:14:26:14:0,26,488:0,26,255:13,0 chr2 228128503 . A . PASS END=228128511 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:14:0,42,452:0,42,255:18,0 chr2 228128512 . C . PASS END=228128512 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:33:24:0,33,778:0,33,255:20,0 chr2 228128513 . C . PASS END=228128531 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:24:0,61,840:0,61,255:25,0 chr2 228128532 . G . PASS END=228128539 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1009:0,84,255:29,0 chr2 228128540 . C T, 43.67 PASS DP=29;MQ=250.00;MQRankSum=4.336;ReadPosRankSum=2.776;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:19,10,0:0.345,0.000:29:6,5,0:13,5,0:43:78,0,50,329,635,964:255,0,255:19,0:4.3673e+01,2.0813e-04,5.3000e+01,3.2887e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:9,10,9,1:6,13,6,4 chr2 228128541 . T . PASS END=228128577 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:86:29:0,86,1078:0,86,255:35,0 chr2 228128578 . G . PASS END=228128625 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:83:33:0,83,1172:0,83,255:34,0 chr2 228128626 . T . PASS END=228128627 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:60:33:0,60,1100:0,60,255:32,0 chr2 228128628 . T . PASS END=228128628 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:99:33:0,99,1271:0,99,255:33,0 chr2 228128629 . T . PASS END=228128629 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,2:33:66:33:0,66,1153:0,66,255:31,0 chr2 228128630 . C . PASS END=228128639 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:33,0 chr2 228128640 . C . PASS END=228128653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:60:28:0,60,900:0,83,255:26,0 chr2 228128654 . C . PASS END=228128660 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:48:25:0,48,720:0,75,255:19,0 chr2 228131133 . G . PASS END=228131135 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1003:0,84,255:28,0 chr2 228131136 . A . PASS END=228131137 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1008:0,68,255:27,0 chr2 228131138 . A . PASS END=228131138 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1011:0,84,255:28,0 chr2 228131139 . T . PASS END=228131139 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:68:28:0,68,1000:0,68,255:27,0 chr2 228131140 . C . PASS END=228131225 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:84:28:0,84,958:0,84,255:40,0 chr2 228131709 . G . PASS END=228131805 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:51,0:51:80:32:0,80,1147:0,80,255:40,0 chr2 228134614 . G . PASS END=228134614 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,111,1665:0,114,255:37,0 chr2 228134624 . A . PASS END=228134624 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,0:38:99:38:0,108,1620:0,114,255:36,0 chr2 228134626 . G . PASS END=228134696 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:86:36:0,86,1307:0,86,255:40,0 chr2 228135480 . C . PASS END=228135480 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,721:0,57,255:19,0 chr2 228135484 . A . PASS END=228135484 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:57:19:0,57,698:0,57,255:19,0 chr2 228135486 . G . PASS END=228135488 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,792:0,63,255:22,0 chr2 228135489 . T . PASS END=228135489 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,798:0,50,255:21,0 chr2 228135490 . T . PASS END=228135490 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,845:0,66,255:22,0 chr2 228135491 . C . PASS END=228135491 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,782:0,50,255:21,0 chr2 228135492 . C . PASS END=228135495 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:22:0,66,808:0,66,255:23,0 chr2 228135496 . G . PASS END=228135496 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,814:0,53,255:22,0 chr2 228135497 . T . PASS END=228135502 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:78:26:0,78,986:0,78,255:26,0 chr2 228135503 . G . PASS END=228135526 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:84:30:0,84,1145:0,86,255:35,0 chr2 228135527 . A . PASS END=228135527 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,2:35:72:35:0,72,1230:0,72,255:33,0 chr2 228135528 . A . PASS END=228135593 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:88:35:0,88,1195:0,88,255:40,0 chr2 228135594 . C . PASS END=228135622 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,1:35:81:31:0,81,1215:0,87,255:36,0 chr2 228135623 . T . PASS END=228135630 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:28:0,75,1125:0,84,255:26,0 chr2 228135631 . C T, 50.00 PASS DP=27;MQ=250.00;MQRankSum=4.367;ReadPosRankSum=2.269;FractionInformativeReads=1.000;R2_5P_bias=0.000 GT:AD:AF:DP:F1R2:F2R1:GQ:PL:SPL:ICNT:GP:PRI:SB:MB 0/1:12,15,0:0.556,0.000:27:4,4,0:8,11,0:48:85,0,49,520,429,950:255,0,255:11,0:5.0000e+01,6.9116e-05,5.2275e+01,4.5000e+02,4.5000e+02,4.5000e+02:0.00,34.77,37.77,34.77,69.54,37.77:5,7,8,7:11,1,5,10 chr2 228135632 . G . PASS END=228135648 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:25:0,62,914:0,62,255:25,0 chr2 228135649 . C . PASS END=228135664 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:45:16:0,45,590:0,48,255:17,0 chr2 228135665 . A . PASS END=228135665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,543:0,31,255:15,0 chr2 228135666 . C . PASS END=228135667 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 228135668 . G . PASS END=228135668 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,1:16:31:16:0,31,519:0,31,255:13,0 chr2 228135669 . G . PASS END=228135669 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 228137665 . G . PASS END=228137685 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:13,0:13:39:13:0,39,399:0,39,255:13,0 chr2 228137686 . G . PASS END=228137695 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:44:15:0,44,551:0,44,255:19,0 chr2 228137696 . C . PASS END=228137699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:60:20:0,60,723:0,60,255:20,0 chr2 228137700 . A . PASS END=228137713 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:54:20:0,54,810:0,60,255:19,0 chr2 228137714 . C . PASS END=228137724 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:60:21:0,60,784:0,63,255:23,0 chr2 228137725 . C . PASS END=228137725 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,820:0,53,255:22,0 chr2 228137726 . C . PASS END=228137796 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:62:22:0,62,795:0,62,255:26,0 chr2 228137797 . G . PASS END=228137797 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,828:0,53,255:21,0 chr2 228137798 . G . PASS END=228137817 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:22:0,60,900:0,66,255:22,0 chr2 228137818 . C . PASS END=228137828 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:42:20:0,42,630:0,60,255:18,0 chr2 228137829 . A . PASS END=228137833 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:16:0,35,585:0,35,255:13,0 chr2 228137835 . T . PASS END=228137835 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 228141097 . T . PASS END=228141097 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:63:21:0,63,806:0,63,255:21,0 chr2 228141100 . G . PASS END=228141133 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:62:23:0,62,861:0,62,255:26,0 chr2 228141134 . T . PASS END=228141134 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:30:23:0,30,776:0,30,255:20,0 chr2 228141135 . T . PASS END=228141178 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:60:21:0,60,792:0,63,255:22,0 chr2 228141179 . C . PASS END=228141183 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:57:20:0,57,855:0,60,255:19,0 chr2 228141184 . G . PASS END=228141184 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,2:20:27:20:0,27,635:0,27,255:17,0 chr2 228141185 . G . PASS END=228141193 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:48:19:0,48,720:0,57,255:19,0 chr2 228141211 . A . PASS END=228141211 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:36:16:0,36,540:0,48,255:12,0 chr2 228142156 . G . PASS END=228142156 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:25:0,66,990:0,75,255:22,0 chr2 228142165 . G . PASS END=228142166 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 228142167 . A . PASS END=228142167 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,875:0,56,255:23,0 chr2 228142168 . T . PASS END=228142172 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:72:24:0,72,922:0,72,255:26,0 chr2 228142173 . G . PASS END=228142185 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:27:0,81,1024:0,81,255:29,0 chr2 228142186 . A . PASS END=228142186 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1102:0,54,255:30,0 chr2 228142187 . A . PASS END=228142187 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:93:31:0,93,1157:0,93,255:31,0 chr2 228142188 . T . PASS END=228142188 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:55:31:0,55,1116:0,55,255:30,0 chr2 228142189 . G . PASS END=228142194 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:96:32:0,96,1180:0,96,255:32,0 chr2 228142195 . A . PASS END=228142195 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,1:32:79:32:0,79,1066:0,79,255:31,0 chr2 228142196 . T . PASS END=228142268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,0:37:84:30:0,84,1202:0,89,255:38,0 chr2 228142269 . G . PASS END=228142269 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1115:0,77,255:28,0 chr2 228142282 . T . PASS END=228142282 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 228144508 . G . PASS END=228144509 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:54:18:0,54,645:0,54,255:19,0 chr2 228144510 . A . PASS END=228144521 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:21:0,63,806:0,63,255:22,0 chr2 228144522 . T . PASS END=228144522 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,1:22:50:22:0,50,775:0,50,255:21,0 chr2 228144523 . C . PASS END=228144537 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:63:22:0,63,784:0,66,255:22,0 chr2 228144538 . T . PASS END=228144538 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,859:0,56,255:22,0 chr2 228144539 . C . PASS END=228144546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:69:24:0,69,1035:0,72,255:25,0 chr2 228144547 . T . PASS END=228144552 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:84:28:0,84,1055:0,84,255:28,0 chr2 228144553 . G . PASS END=228144553 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,1:28:45:28:0,45,963:0,45,255:27,0 chr2 228144554 . G . PASS END=228144564 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1045:0,84,255:28,0 chr2 228144565 . G . PASS END=228144576 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:71:28:0,71,993:0,71,255:26,0 chr2 228144577 . C . PASS END=228144580 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,976:0,81,255:27,0 chr2 228144581 . G . PASS END=228144583 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:65:27:0,65,961:0,65,255:26,0 chr2 228144584 . A . PASS END=228144584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:50:27:0,50,947:0,50,255:25,0 chr2 228144585 . G . PASS END=228144607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:61:25:0,61,900:0,61,255:25,0 chr2 228145156 . G . PASS END=228145256 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,0:45:91:35:0,91,1205:0,91,255:40,0 chr2 228145257 . T . PASS END=228145257 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:72:37:0,72,1296:0,72,255:32,0 chr2 228145258 . C . PASS END=228145265 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:81:34:0,81,1215:0,85,255:32,0 chr2 228145266 . C . PASS END=228145267 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,102,255:26,0 chr2 228145268 . C . PASS END=228145268 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:34:0,81,1215:0,102,255:27,0 chr2 228145269 . T . PASS END=228145272 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:78:34:0,78,1170:0,85,255:26,0 chr2 228145273 . A . PASS END=228145277 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,85,255:28,0 chr2 228145278 . A . PASS END=228145280 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1094:0,77,255:26,0 chr2 228145281 . A . PASS END=228145288 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:30:0,81,1215:0,90,255:28,0 chr2 228145289 . G . PASS END=228145306 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:63:27:0,63,945:0,81,255:26,0 chr2 228145314 . A . PASS END=228145314 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:54:23:0,54,810:0,69,255:18,0 chr2 228145607 . A . PASS END=228145607 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:25:0,69,1035:0,75,255:23,0 chr2 228145609 . G . PASS END=228145619 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:69:25:0,69,1035:0,75,255:26,0 chr2 228145620 . C . PASS END=228145652 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:81:28:0,81,1080:0,84,255:30,0 chr2 228145653 . G . PASS END=228145653 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1070:0,74,255:27,0 chr2 228145654 . G . PASS END=228145654 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:31:0,87,1305:0,93,255:29,0 chr2 228145655 . A . PASS END=228145656 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:75:31:0,75,1125:0,93,255:25,0 chr2 228145657 . G . PASS END=228145665 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:81:33:0,81,1215:0,99,255:28,0 chr2 228145666 . A . PASS END=228145680 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:75:26:0,75,1125:0,78,255:26,0 chr2 228145681 . C . PASS END=228145681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,1:26:39:26:0,39,922:0,39,255:23,0 chr2 228145682 . C . PASS END=228145702 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:63:25:0,63,945:0,75,255:24,0 chr2 228145703 . T . PASS END=228145719 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:51:20:0,51,765:0,60,255:19,0 chr2 228145720 . A . PASS END=228145722 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:20,0:20:36:19:0,36,540:0,57,255:12,0 chr2 228147073 . G . PASS END=228147073 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:14,0:14:39:14:0,39,585:0,42,255:13,0 chr2 228147080 . G . PASS END=228147084 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:48:16:0,48,612:0,48,255:17,0 chr2 228147085 . A . PASS END=228147085 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,1:17:35:17:0,35,604:0,35,255:16,0 chr2 228147086 . A . PASS END=228147087 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,0:17:51:17:0,51,637:0,51,255:17,0 chr2 228147088 . A . PASS END=228147088 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,1:18:37:18:0,37,588:0,37,255:17,0 chr2 228147089 . G . PASS END=228147110 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:60:20:0,60,716:0,60,255:25,0 chr2 228147111 . A . PASS END=228147111 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,1:25:58:25:0,58,785:0,58,255:24,0 chr2 228147112 . C . PASS END=228147115 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:75:25:0,75,939:0,75,255:26,0 chr2 228147116 . G . PASS END=228147152 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:80:27:0,80,1002:0,80,255:31,0 chr2 228147153 . A . PASS END=228147153 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1070:0,77,255:29,0 chr2 228147154 . A . PASS END=228147169 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:87:30:0,87,1305:0,90,255:30,0 chr2 228147170 . A . PASS END=228147170 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1037:0,74,255:28,0 chr2 228147171 . T . PASS END=228147180 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:87:30:0,87,1133:0,90,255:30,0 chr2 228147181 . T . PASS END=228147181 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,1:30:74:30:0,74,1092:0,74,255:29,0 chr2 228147182 . C . PASS END=228147199 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:90:30:0,90,1070:0,90,255:31,0 chr2 228147200 . C . PASS END=228147244 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,870:0,61,255:26,0 chr2 228147245 . C . PASS END=228147248 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:42:23:0,42,630:0,69,255:18,0 chr2 228147260 . T . PASS END=228147260 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:42:16:0,42,630:0,48,255:14,0 chr2 228148482 . G . PASS END=228148492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:90:30:0,90,1133:0,90,255:33,0 chr2 228148493 . A . PASS END=228148493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,1:33:61:33:0,61,1194:0,61,255:31,0 chr2 228148494 . G . PASS END=228148573 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:83:32:0,83,1180:0,83,255:36,0 chr2 228148589 . C . PASS END=228148589 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:48:23:0,48,720:0,69,255:16,0 chr2 228148916 . C . PASS END=228148916 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:90:30:0,90,1141:0,90,255:30,0 chr2 228148926 . G . PASS END=228148937 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:46,0:46:99:45:0,99,1629:0,99,255:40,0 chr2 228148938 . A . PASS END=228148938 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:45,2:47:64:47:0,64,1598:0,64,255:40,0 chr2 228148939 . T . PASS END=228149062 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,0:56:81:41:0,81,1215:0,85,255:40,0 chr2 228149067 . G . PASS END=228149067 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:78:36:0,78,1170:0,108,255:26,0 chr2 228153866 . G . PASS END=228153955 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:42,0:42:87:33:0,87,1305:0,87,255:40,0 chr2 228153956 . G . PASS END=228153959 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:66:31:0,66,990:0,93,255:22,0 chr2 228153960 . A . PASS END=228153964 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:45:31:0,45,675:0,77,255:19,0 chr2 228154715 . G . PASS END=228154785 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:96:37:0,96,1418:0,98,255:40,0 chr2 228154786 . G . PASS END=228154786 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,1:37:73:37:0,73,1341:0,73,255:31,0 chr2 228154787 . G . PASS END=228154804 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:84:33:0,84,1260:0,99,255:33,0 chr2 228154806 . T . PASS END=228154806 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:33,0:33:84:33:0,84,1260:0,99,255:28,0 chr2 228155463 . G . PASS END=228155492 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:27:0,81,970:0,81,255:29,0 chr2 228155493 . T . PASS END=228155493 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:71:29:0,71,1047:0,71,255:27,0 chr2 228155494 . C . PASS END=228155497 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:87:29:0,87,1064:0,87,255:29,0 chr2 228155498 . G . PASS END=228155498 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,1:29:48:29:0,48,1016:0,48,255:28,0 chr2 228155499 . G . PASS END=228155519 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:84:29:0,84,1102:0,87,255:31,0 chr2 228155520 . T . PASS END=228155520 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:77:31:0,77,1147:0,77,255:27,0 chr2 228155521 . C . PASS END=228155523 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:31,0:31:81:31:0,81,1215:0,93,255:28,0 chr2 228155524 . A . PASS END=228155545 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:69:27:0,69,1035:0,74,255:26,0 chr2 228155546 . G . PASS END=228155546 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:42:27:0,42,969:0,42,255:23,0 chr2 228155547 . A . PASS END=228155556 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,0:26:66:24:0,66,990:0,72,255:23,0 chr2 228155557 . G . PASS END=228155557 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,867:0,56,255:22,0 chr2 228155558 . C . PASS END=228155559 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:69:23:0,69,869:0,69,255:23,0 chr2 228155560 . A . PASS END=228155560 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:53:23:0,53,790:0,53,255:22,0 chr2 228155561 . G . PASS END=228155569 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,853:0,69,255:23,0 chr2 228155570 . G . PASS END=228155584 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:42:19:0,42,630:0,57,255:18,0 chr2 228155585 . G . PASS END=228155585 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:17,2:19:24:19:0,24,582:0,24,255:12,0 chr2 228155586 . G . PASS END=228155597 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:42:17:0,42,630:0,51,255:15,0 chr2 228155598 . C . PASS END=228155600 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:30:16:0,30,450:0,48,255:10,0 chr2 228155601 . C . PASS END=228155602 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:24:15:0,24,360:0,45,255:8,0 chr2 228155603 . G . PASS END=228155603 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:15,0:15:18:15:0,18,270:0,45,255:6,0 chr2 228157894 . G . PASS END=228157894 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:16,0:16:45:16:0,45,675:0,48,255:15,0 chr2 228157906 . G . PASS END=228157910 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:19,0:19:48:19:0,48,720:0,57,255:18,0 chr2 228157911 . A . PASS END=228157928 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:66:24:0,66,884:0,72,255:26,0 chr2 228157929 . A . PASS END=228157934 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:81:27:0,81,978:0,81,255:27,0 chr2 228157935 . G . PASS END=228157935 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:26,1:27:65:27:0,65,976:0,65,255:26,0 chr2 228157936 . A . PASS END=228157944 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,0:30:84:29:0,84,1260:0,87,255:29,0 chr2 228157945 . A . PASS END=228157945 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,1:31:54:31:0,54,1086:0,54,255:28,0 chr2 228157946 . G . PASS END=228157969 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,0:34:87:30:0,87,1097:0,90,255:34,0 chr2 228157970 . G . PASS END=228157970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,2:34:69:34:0,69,1169:0,69,255:29,0 chr2 228157971 . G . PASS END=228157992 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:32,0:32:83:30:0,83,1140:0,83,255:31,0 chr2 228157993 . T . PASS END=228158022 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:27,0:27:60:23:0,60,900:0,62,255:26,0 chr2 228158023 . T . PASS END=228158029 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:57:21:0,57,855:0,63,255:19,0 chr2 228158030 . C . PASS END=228158030 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:60:21:0,60,900:0,63,255:20,0 chr2 228158031 . C . PASS END=228158033 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:21,0:21:54:21:0,54,810:0,63,255:19,0 chr2 228158459 . T . PASS END=228158465 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:99:40:0,106,1445:0,106,255:38,0 chr2 228158466 . A . PASS END=228158466 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:68:41:0,68,1426:0,68,255:35,0 chr2 228158467 . G . PASS END=228158476 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:41,0:41:81:40:0,81,1398:0,81,255:39,0 chr2 228158477 . T . PASS END=228158477 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:38,2:40:73:40:0,73,1402:0,73,255:35,0 chr2 228158478 . G . PASS END=228158481 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,0:40:99:40:0,108,1620:0,120,255:36,0 chr2 228159206 . G . PASS END=228159285 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:44,0:44:87:37:0,87,1305:0,87,255:40,0 chr2 228159286 . G . PASS END=228159286 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:34,2:36:53:36:0,53,1166:0,53,255:27,0 chr2 228159672 . T . PASS END=228159672 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:36,0:36:99:36:0,102,1530:0,108,255:34,0 chr2 228159680 . G . PASS END=228159681 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:35,0:35:88:35:0,88,1190:0,88,255:32,0 chr2 228159682 . C . PASS END=228159682 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:30,5:35:22:35:0,22,982:0,22,255:28,0 chr2 228159683 . T . PASS END=228159687 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,1:38:81:38:0,81,1236:0,81,255:35,0 chr2 228159688 . G . PASS END=228159691 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,2:41:67:39:0,67,1216:0,67,255:37,0 chr2 228159692 . T . PASS END=228159693 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,1:40:99:40:0,104,1413:0,104,255:39,0 chr2 228159694 . C . PASS END=228159694 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:37,2:39:70:39:0,70,1244:0,70,255:37,0 chr2 228159695 . C . PASS END=228159699 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,1:41:84:40:0,84,1340:0,84,255:40,0 chr2 228159700 . T . PASS END=228159700 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:40,2:42:78:42:0,78,1255:0,78,255:40,0 chr2 228159701 . C . PASS END=228159708 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:47,1:48:99:47:0,108,1517:0,108,255:40,0 chr2 228159709 . C . PASS END=228159778 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:56,1:57:99:50:0,110,1800:0,110,255:40,0 chr2 228159970 . G . PASS END=228159970 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:39,0:39:99:39:0,114,1710:0,117,255:38,0 chr2 228159985 . G . PASS END=228160032 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:43,0:43:99:39:0,105,1575:0,117,255:40,0 chr2 228161203 . G . PASS END=228161207 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:77,0:77:99:76:0,120,1800:0,190,255:40,0 chr2 228162381 . T . PASS END=228162381 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,615:0,54,255:18,0 chr2 228162388 . A . PASS END=228162388 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,698:0,54,255:18,0 chr2 228162390 . G . PASS END=228162390 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:18,0:18:54:18:0,54,690:0,54,255:18,0 chr2 228162391 . A . PASS END=228162395 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,0:22:66:22:0,66,800:0,66,255:23,0 chr2 228162396 . A . PASS END=228162396 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:22,1:23:52:23:0,52,730:0,52,255:22,0 chr2 228162397 . A . PASS END=228162406 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,0:23:66:23:0,66,815:0,69,255:23,0 chr2 228162407 . G . PASS END=228162408 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,837:0,56,255:22,0 chr2 228162409 . A . PASS END=228162412 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,864:0,72,255:24,0 chr2 228162413 . C . PASS END=228162413 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:55:24:0,55,823:0,55,255:23,0 chr2 228162414 . C . PASS END=228162416 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:24,0:24:72:24:0,72,900:0,72,255:24,0 chr2 228162417 . G . PASS END=228162417 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:23,1:24:56:24:0,56,845:0,56,255:22,0 chr2 228162418 . T . PASS END=228162456 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:25,0:25:69:24:0,69,953:0,72,255:26,0 chr2 228162457 . T . PASS END=228162458 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:81:28:0,81,1215:0,84,255:27,0 chr2 228162459 . C . PASS END=228162472 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:67:27:0,67,970:0,67,255:26,0 chr2 228162473 . C . PASS END=228162474 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:29,0:29:81:28:0,81,1215:0,84,255:27,0 chr2 228162475 . C . PASS END=228162478 GT:AD:DP:GQ:MIN_DP:PL:SPL:ICNT 0/0:28,0:28:78:28:0,78,1170:0,84,255:26,0 chr2